1992 145 26 83 chr2 0 56 -253256527 - L1MA5 LINE L1 -3 6297 6239 1653 120 13 0 chr2 56 281 -253256302 - AluSq SINE Alu -85 228 1 1992 145 26 83 chr2 281 345 -253256238 - L1MA5 LINE L1 -61 6239 6173 423 0 0 0 chr2 345 392 -253256191 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 1992 145 26 83 chr2 392 406 -253256177 - L1MA5 LINE L1 -127 6173 6160 1887 143 0 0 chr2 406 679 -253255904 - AluJb SINE Alu -28 284 12 1992 145 26 83 chr2 679 962 -253255621 - L1MA5 LINE L1 -140 6160 5902 1408 212 54 25 chr2 954 1282 -253255301 - L1M2 LINE L1 -4504 2345 2001 * 2186 72 0 0 chr2 1282 1545 -253255038 - AluY SINE Alu -48 263 1 1408 212 54 25 chr2 1545 1622 -253254961 - L1M2 LINE L1 -4848 2001 1928 780 195 0 0 chr2 1727 1855 -253254728 - FLAM_C SINE Alu -13 130 3 520 216 147 0 chr2 3471 3535 -253253048 - MER94 DNA DNA -1 133 80 2066 120 17 0 chr2 3535 3827 -253252756 - AluSx SINE Alu -15 297 1 520 216 147 0 chr2 3827 3878 -253252705 - MER94 DNA DNA -54 80 1 372 235 45 45 chr2 3884 4016 -253252567 + MIR3 SINE MIR 68 199 -9 31 0 0 0 chr2 8080 8111 -253248472 + AT_rich Low_complexity Low_complexity 1 31 0 196 321 46 18 chr2 8204 8313 -253248270 - L3b LINE CR1 -204 1379 1268 743 242 107 115 chr2 10223 10735 -253245848 + MLT1H LTR MaLR 42 549 0 2264 173 89 30 chr2 11097 11570 -253245013 + MLT1D LTR MaLR 5 505 0 377 270 59 26 chr2 11927 12079 -253244504 + MER67A LTR ERV1 387 543 0 1481 178 3 38 chr2 12760 13052 -253243531 - AluJo SINE Alu -18 294 13 273 322 16 16 chr2 13203 13324 -253243259 - MLT1H LTR MaLR -387 162 42 461 188 31 10 chr2 13659 13755 -253242828 + MER4A LTR ERV1 1 98 -566 1594 143 27 79 chr2 13755 14119 -253242464 + MER4A LTR ERV1 261 664 0 2696 118 3 6 chr2 15360 15725 -253240858 - THE1B LTR MaLR 0 364 1 11490 113 33 3 chr2 15725 17258 -253239325 - THE1B-int LTR MaLR 0 1580 1 2541 126 14 16 chr2 17258 17623 -253238960 - THE1B LTR MaLR 0 364 1 1844 135 0 82 chr2 18927 19246 -253237337 - MER4A LTR ERV1 0 664 372 264 263 197 0 chr2 19481 19618 -253236965 + MIR SINE MIR 32 195 -67 566 274 48 84 chr2 19894 20252 -253236331 - MLT1J1 LTR MaLR -37 409 65 286 309 40 24 chr2 21512 21638 -253234945 - L1ME3A LINE L1 -8 6162 6035 2071 231 57 19 chr2 21663 22186 -253234397 - MER90 LTR ERV1 0 614 72 200 295 90 41 chr2 23800 23922 -253232661 + MIR SINE MIR 20 147 -115 198 286 16 32 chr2 24001 24064 -253232519 + MIR3 SINE MIR 130 191 -17 197 275 0 0 chr2 24269 24309 -253232274 - L2 LINE L2 -14 3258 3219 * 239 313 153 14 chr2 24304 24448 -253232135 - MIR SINE MIR -93 169 6 1719 166 32 32 chr2 26067 26375 -253230208 + AluJo SINE Alu 1 308 -4 22 56 0 0 chr2 26456 26492 -253230091 + AT_rich Low_complexity Low_complexity 1 36 0 853 229 143 48 chr2 26493 26829 -253229754 - L1MC4 LINE L1 -437 7605 7238 1748 259 12 79 chr2 26831 27143 -253229440 - L1MC4a LINE L1 -803 7005 6674 1527 205 3 7 chr2 27143 27426 -253229157 + AluJo SINE Alu 1 282 -30 1748 259 12 79 chr2 27426 27533 -253229050 - L1MC4a LINE L1 -1134 6674 6635 342 0 0 0 chr2 27533 27571 -253229012 + (CA)n Simple_repeat Simple_repeat 2 39 0 1748 259 12 79 chr2 27571 27744 -253228839 - L1MC4a LINE L1 -1173 6635 6452 291 252 9 19 chr2 28247 28354 -253228229 + (TA)n Simple_repeat Simple_repeat 1 106 0 28 61 0 0 chr2 28412 28461 -253228122 + AT_rich Low_complexity Low_complexity 1 49 0 315 276 123 58 chr2 29005 29248 -253227335 + L1M4 LINE L1 2917 3175 -2971 880 228 106 26 chr2 29265 29577 -253227006 + L1M4 LINE L1 2142 2478 -3668 1652 138 0 0 chr2 29587 29826 -253226757 + L1P3 LINE L1 10 248 -6213 4742 131 58 99 chr2 29826 31256 -253225327 + pTR5 LTR ERV1 742 2433 -5 11163 107 15 14 chr2 31257 33063 -253223520 + L1P3 LINE L1 238 2041 -4420 3440 200 31 71 chr2 33063 34073 -253222510 + LTR5 LTR ERVK 1 969 0 11163 107 15 14 chr2 34073 34515 -253222068 + L1P3 LINE L1 2041 2499 -3962 22626 97 11 1 chr2 34515 38410 -253218173 + L1PA7 LINE L1 2254 6154 0 11163 107 15 14 chr2 38410 38444 -253218139 + L1P3 LINE L1 2499 2531 -3930 2023 61 4 8 chr2 38576 38838 -253217745 + AluY SINE Alu 34 294 -17 553 317 107 26 chr2 39186 39480 -253217103 - L2 LINE L2 -6 3307 3038 1628 122 35 8 chr2 39480 39735 -253216848 + AluSx SINE Alu 44 305 -7 553 317 107 26 chr2 39735 39959 -253216624 - L2 LINE L2 -275 3038 2742 24 53 0 0 chr2 40812 40850 -253215733 + AT_rich Low_complexity Low_complexity 1 38 0 349 350 106 0 chr2 41201 41381 -253215202 + MIR SINE MIR 49 247 -15 4491 172 86 19 chr2 41486 42520 -253214063 - L1MA4A LINE L1 -23 6982 5880 * 12065 197 19 11 chr2 42515 45098 -253211485 - L1MA4A LINE L1 -1221 5627 3022 10227 215 67 27 chr2 45426 46328 -253210255 - L1MA4A LINE L1 -3811 3037 2172 2103 121 3 0 chr2 46328 46618 -253209965 - AluSx SINE Alu -21 291 1 10227 215 67 27 chr2 46618 48437 -253208146 - L1MA4A LINE L1 -4676 2172 208 317 82 20 0 chr2 48689 48738 -253207845 + (GGAA)n Simple_repeat Simple_repeat 3 52 0 26 0 0 0 chr2 49518 49544 -253207039 + AT_rich Low_complexity Low_complexity 1 26 0 226 296 101 16 chr2 49764 50011 -253206572 + L1ME4a LINE L1 5820 6087 -34 502 250 101 60 chr2 50508 50756 -253205827 - MIR SINE MIR 0 262 5 2315 103 0 0 chr2 51102 51402 -253205181 - AluSx SINE Alu -12 300 1 291 293 0 40 chr2 52047 52122 -253204461 + L2 LINE L2 3181 3252 -20 287 263 64 99 chr2 52543 52714 -253203869 - L3 LINE CR1 -350 1227 1063 2266 112 3 0 chr2 52906 53209 -253203374 + AluSx SINE Alu 1 304 -8 281 333 24 56 chr2 53224 53350 -253203233 + L2 LINE L2 3116 3237 -35 195 301 60 48 chr2 53516 53599 -253202984 - MIR SINE MIR -168 94 11 264 207 261 27 chr2 54790 54901 -253201682 + L2 LINE L2 3136 3272 0 2273 90 3 7 chr2 55311 55612 -253200971 + AluSc SINE Alu 1 300 -9 545 300 77 66 chr2 55723 56073 -253200510 - L2 LINE L2 -368 2946 2593 3759 227 55 2 chr2 56074 56923 -253199660 - MER45B DNA AcHobo -145 895 2 1543 208 5 49 chr2 56981 57191 -253199392 + Charlie4a DNA MER1_type 67 250 -1711 2060 111 7 24 chr2 57191 57489 -253199094 + AluSg SINE Alu 1 293 -17 1543 208 5 49 chr2 57489 57705 -253198878 + Charlie4a DNA MER1_type 250 474 -34 554 259 228 4 chr2 57724 57983 -253198600 - L2 LINE L2 -2959 355 39 318 218 45 115 chr2 58384 58457 -253198126 - HAL1 LINE L1 -1588 919 861 1939 117 28 14 chr2 58457 58748 -253197835 + AluSx SINE Alu 1 295 -17 318 218 45 115 chr2 58748 58830 -253197753 - HAL1 LINE L1 -1646 861 775 221 298 0 0 chr2 59532 59589 -253196994 + MER5B DNA MER1_type 122 178 0 492 229 144 8 chr2 60204 60322 -253196261 - MER94 DNA DNA 0 134 1 654 242 88 16 chr2 60660 60854 -253195729 - MIR SINE MIR -2 260 53 310 302 100 83 chr2 60954 61364 -253195219 - L2 LINE L2 -3 3269 2853 225 0 0 0 chr2 61470 61495 -253195088 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 335 252 93 0 chr2 64313 64420 -253192163 + MIR SINE MIR 100 216 -46 409 213 87 47 chr2 64442 64569 -253192014 - MIR SINE MIR -124 138 7 7411 54 5 13 chr2 65185 66662 -253189921 + SVA Other Other 1 1386 0 277 371 60 22 chr2 66778 67010 -253189573 - MIR SINE MIR -1 261 21 4387 189 9 40 chr2 67848 68848 -253187735 - L1 LINE L1 -1055 5091 4123 197 132 26 0 chr2 69017 69055 -253187528 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 573 270 20 14 chr2 69676 69824 -253186759 + MER5B DNA MER1_type 30 178 0 1921 169 3 3 chr2 69938 70246 -253186337 - AluJo SINE Alu -4 308 1 2148 103 3 0 chr2 71659 71941 -253184642 + AluSp SINE Alu 2 284 -29 1613 208 3 3 chr2 72110 72422 -253184161 + AluJb SINE Alu 1 312 0 336 222 247 31 chr2 72531 72693 -253183890 + L1ME3A LINE L1 5612 5808 -354 239 200 46 31 chr2 72722 72787 -253183796 - LTR43 LTR ERV1 -24 578 513 959 266 50 16 chr2 72875 73195 -253183388 - LTR43 LTR ERV1 -141 461 131 998 209 59 62 chr2 73276 73615 -253182968 + L1ME3A LINE L1 5825 6162 -8 3698 148 26 11 chr2 74109 74717 -253181866 + L1MC1 LINE L1 5709 6325 -8 2678 99 79 27 chr2 74718 75060 -253181523 + MSTA LTR MaLR 1 369 -59 1830 144 27 27 chr2 75060 75359 -253181224 + AluSx SINE Alu 1 299 -13 2678 99 79 27 chr2 75359 75421 -253181162 + MSTA LTR MaLR 369 426 -2 2454 208 73 7 chr2 76767 77333 -253179250 - L1MA9 LINE L1 -539 5773 5166 1922 181 20 75 chr2 77326 77834 -253178749 + L1MA9 LINE L1 5803 6282 -30 * 22 0 0 0 chr2 77834 77856 -253178727 + AT_rich Low_complexity Low_complexity 1 22 0 1157 218 20 110 chr2 77918 78317 -253178266 + MLT1A1 LTR MaLR 1 363 -2 2344 135 114 5 chr2 80626 81012 -253175571 - MSTA LTR MaLR 0 428 1 1931 73 0 8 chr2 81367 81614 -253174969 + AluY SINE Alu 54 298 -13 32 75 0 0 chr2 82008 82075 -253174508 + AT_rich Low_complexity Low_complexity 1 67 0 1804 87 0 0 chr2 82080 82310 -253174273 - PABL_A LTR ERV1 -430 230 1 10992 77 15 1 chr2 82310 83724 -253172859 - PABL_A-int LTR ERV1 0 5015 3583 198 208 188 0 chr2 83975 84023 -253172560 - L2 LINE L2 -249 3023 2967 270 247 0 55 chr2 84042 84115 -253172468 + L2 LINE L2 3242 3310 -3 312 291 81 12 chr2 84238 84410 -253172173 - L1MEc LINE L1 -4976 1587 1404 720 188 0 99 chr2 84478 84659 -253171924 + Tigger1 DNA MER2_type 1 163 -2255 * 1236 156 24 5 chr2 84641 84853 -253171730 + Tigger1 DNA MER2_type 2203 2418 0 7310 223 52 31 chr2 84853 84916 -253171667 - L1MEc LINE L1 -1913 4469 4409 2269 105 20 0 chr2 84916 85220 -253171363 - AluSp SINE Alu -3 310 1 7310 223 52 31 chr2 85220 85864 -253170719 - L1MEc LINE L1 -1973 4409 3780 192 77 0 0 chr2 85864 85890 -253170693 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 7310 223 52 31 chr2 85890 86784 -253169799 - L1MEc LINE L1 -2602 3780 2811 2187 170 31 0 chr2 86784 87137 -253169446 - THE1B LTR MaLR 0 364 1 7310 223 52 31 chr2 87137 87605 -253168978 - L1MEc LINE L1 -3571 2811 2354 2451 162 42 50 chr2 87609 88091 -253168492 + MER44D DNA MER2_type 4 481 -224 2371 136 48 112 chr2 88114 88778 -253167805 + MER4A LTR ERV1 1 465 0 1280 168 52 22 chr2 88780 89012 -253167571 + MER44D DNA MER2_type 479 589 -16 421 214 44 13 chr2 89016 89176 -253167407 - L1MEc LINE L1 -4018 2365 2202 671 91 10 20 chr2 89185 89284 -253167299 + MER4A LTR ERV1 1 98 -566 1649 103 45 91 chr2 89284 89646 -253166937 + MER4A LTR ERV1 261 664 0 328 255 41 0 chr2 89646 89744 -253166839 - L1MEc LINE L1 -4190 2194 2093 597 265 180 51 chr2 90523 90995 -253165588 - L1MEc LINE L1 -5381 991 459 538 166 32 35 chr2 91029 91184 -253165399 + MER51A LTR ERV1 1 154 -223 1631 174 46 10 chr2 91186 91490 -253165093 + MER51B LTR ERV1 63 377 0 330 242 74 34 chr2 91609 91758 -253164825 - HAL1b LINE L1 0 1348 1194 1210 65 130 0 chr2 92366 92535 -253164048 - LTR17 LTR ERV1 -2 778 588 898 85 0 0 chr2 92551 92669 -253163914 + AluY SINE Alu 187 304 -7 4898 67 0 3 chr2 92669 93269 -253163314 - LTR17 LTR ERV1 -182 598 1 2403 65 0 0 chr2 93269 93560 -253163023 - HERV17 LTR ERV1 0 8626 8336 303 98 0 0 chr2 93550 93591 -253162992 - HERV17 LTR ERV1 -1077 7549 7509 * 9680 47 10 0 chr2 93583 94731 -253161852 - HERV17 LTR ERV1 -2607 6019 4861 14584 45 4 3 chr2 94833 97002 -253159581 - HERV17 LTR ERV1 -4023 4603 2432 13791 70 17 26 chr2 97001 98835 -253157748 - HERV17 LTR ERV1 -6808 1818 1 * 6348 64 30 5 chr2 98835 99596 -253156987 - LTR17 LTR ERV1 0 780 1 218 340 53 0 chr2 100110 100204 -253156379 - L2 LINE L2 -262 3051 2953 1518 183 7 43 chr2 100827 101128 -253155455 + AluJb SINE Alu 1 290 -22 484 358 29 5 chr2 102674 102878 -253153705 + L3 LINE CR1 1261 1469 -108 7657 52 6 0 chr2 102962 104312 -253152271 + L1PA7 LINE L1 4793 6152 -2 208 308 91 28 chr2 105400 105543 -253151040 + MIR SINE MIR 36 187 -75 4364 192 56 10 chr2 106711 108046 -253148537 + L1MC2 LINE L1 4791 6170 -174 196 270 27 40 chr2 108747 108821 -253147762 + MIR3 SINE MIR 84 156 -52 32 0 0 0 chr2 108911 108943 -253147640 + AT_rich Low_complexity Low_complexity 1 32 0 378 61 0 0 chr2 109715 109764 -253146819 + (CA)n Simple_repeat Simple_repeat 2 50 0 2636 51 0 0 chr2 110276 110587 -253145996 + AluY SINE Alu 1 311 0 233 250 40 13 chr2 110740 110816 -253145767 - HsTC2 DNA Tc2 -1820 78 1 264 269 75 32 chr2 112932 113025 -253143558 + HAL1 LINE L1 806 902 -1605 450 219 0 0 chr2 113144 113249 -253143334 + (CATATA)n Simple_repeat Simple_repeat 2 106 0 713 136 19 0 chr2 113249 113352 -253143231 - AluSx SINE Alu -16 293 189 969 149 0 0 chr2 113352 113493 -253143090 - AluSx SINE Alu -172 141 1 22 0 0 0 chr2 113594 113616 -253142967 + AT_rich Low_complexity Low_complexity 1 22 0 1870 167 17 0 chr2 116057 116356 -253140227 + AluSx SINE Alu 1 304 -8 3196 103 38 0 chr2 117228 117324 -253139259 + L1PB1 LINE L1 5684 5775 -376 182 37 37 0 chr2 117324 117351 -253139232 + (TA)n Simple_repeat Simple_repeat 1 28 0 * 324 0 0 0 chr2 117350 117386 -253139197 + (CA)n Simple_repeat Simple_repeat 2 37 0 3196 103 38 0 chr2 117351 117737 -253138846 + L1PB1 LINE L1 5775 6148 -3 637 307 32 42 chr2 118728 119158 -253137425 + LTR35 LTR ERV1 141 556 0 1559 256 22 24 chr2 119163 119577 -253137006 + LTR35-int LTR ERV1 5 417 -1369 1005 96 0 20 chr2 119585 119731 -253136852 + L1PA4 LINE L1 6012 6154 -1 5983 176 49 36 chr2 119812 121105 -253135478 + LTR57-int LTR ERVL 288 1596 -3747 * 6258 159 79 78 chr2 120157 122450 -253134133 + LTR35-int LTR ERV1 682 4183 -2148 625 135 76 189 chr2 122586 122771 -253133812 + LOR1-int LTR ERV1 3786 3949 -4171 367 93 30 81 chr2 122897 122997 -253133586 + LOR1-int LTR ERV1 4602 4682 -1264 1108 189 5 5 chr2 123001 123191 -253133392 + LOR1-int LTR ERV1 6908 7097 -1023 4043 153 59 22 chr2 123194 123480 -253133103 + MER49 LTR ERV1 1 275 -648 2619 127 16 0 chr2 123480 123849 -253132734 + THE1C LTR MaLR 1 375 0 4043 153 59 22 chr2 123849 124294 -253132289 + MER49 LTR ERV1 275 759 -164 365 282 71 81 chr2 124481 124852 -253131731 + LOR1-int LTR ERV1 4971 7466 -654 736 270 59 55 chr2 125043 125495 -253131088 + LTR35 LTR ERV1 88 556 0 23 0 0 0 chr2 125615 125638 -253130945 + AT_rich Low_complexity Low_complexity 1 23 0 1104 277 108 36 chr2 125792 126290 -253130293 + MLT1E LTR MaLR 52 585 -8 225 0 0 0 chr2 126294 126319 -253130264 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 481 234 70 88 chr2 126335 126562 -253130021 + L1MC4 LINE L1 7820 8042 0 2795 168 25 41 chr2 126677 127194 -253129389 - LTR22 LTR ERVK 0 509 1 819 115 0 0 chr2 127384 127514 -253129069 + (GGAA)n Simple_repeat Simple_repeat 3 132 0 1607 210 49 3 chr2 127840 128187 -253128396 + MLT1A1 LTR MaLR 1 363 -2 331 313 146 18 chr2 128261 128536 -253128047 + L1MEd LINE L1 602 911 -5723 437 295 100 33 chr2 128825 129205 -253127378 + L1MEd LINE L1 1220 1716 -4971 415 323 46 5 chr2 129218 129413 -253127170 + L2 LINE L2 2636 2838 -476 516 253 133 28 chr2 129495 129744 -253126839 + L2 LINE L2 3039 3313 0 26 30 0 0 chr2 131058 131091 -253125492 + AT_rich Low_complexity Low_complexity 1 33 0 305 328 61 22 chr2 131297 131477 -253125106 - MIR SINE MIR -43 219 33 6387 102 48 1 chr2 132128 133055 -253123528 - Tigger1 DNA MER2_type -777 1641 672 605 203 47 20 chr2 133300 133448 -253123135 - L1MC2 LINE L1 -9 6335 6184 376 238 139 112 chr2 134146 134676 -253121907 + L1M2 LINE L1 455 1434 -5415 448 66 0 0 chr2 134886 134947 -253121636 + Alu SINE Alu 235 295 -14 284 62 0 21 chr2 135352 135400 -253121183 + (CA)n Simple_repeat Simple_repeat 2 48 0 25 51 0 0 chr2 135618 135657 -253120926 + AT_rich Low_complexity Low_complexity 1 39 0 2252 248 95 11 chr2 135803 136509 -253120074 - L1ME1 LINE L1 -128 6107 5343 1109 213 49 0 chr2 136524 136787 -253119796 - L1MA4 LINE L1 -11 6289 6014 360 271 43 7 chr2 136883 137023 -253119560 - L1ME1 LINE L1 -5000 1396 1252 243 278 47 53 chr2 137103 137314 -253119269 - L1ME LINE L1 -4723 1278 778 475 310 90 29 chr2 137720 138097 -253118486 - L2 LINE L2 -662 2652 2253 21 0 0 0 chr2 138759 138780 -253117803 + AT_rich Low_complexity Low_complexity 1 21 0 1732 188 28 17 chr2 139330 139691 -253116892 + MLT1A1 LTR MaLR 1 365 0 263 28 28 0 chr2 140227 140263 -253116320 + (TAA)n Simple_repeat Simple_repeat 3 39 0 246 269 51 0 chr2 141120 141198 -253115385 - MIR SINE MIR -95 167 86 472 193 11 0 chr2 142486 142574 -253114009 + MER20 DNA MER1_type 129 217 -2 216 226 32 16 chr2 143215 143277 -253113306 - MIR SINE MIR -172 90 28 435 223 48 0 chr2 145221 145324 -253111259 - Charlie2 DNA MER1_type -892 1970 1863 376 365 68 4 chr2 145354 145617 -253110966 - Charlie2 DNA MER1_type -2502 280 1 325 286 20 34 chr2 146387 146534 -253110049 + L1MC4a LINE L1 5296 5440 -681 326 332 50 23 chr2 147255 147604 -253108979 + L1MC4a LINE L1 5531 5819 -302 21 0 0 0 chr2 147612 147633 -253108950 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr2 147934 147955 -253108628 + (TG)n Simple_repeat Simple_repeat 2 22 0 2878 10 0 0 chr2 149492 149798 -253106785 + AluYa5 SINE Alu 1 306 -5 1451 167 29 8 chr2 150574 150814 -253105769 - AluSx SINE Alu -28 284 40 22 35 0 0 chr2 151244 151273 -253105310 + AT_rich Low_complexity Low_complexity 1 29 0 240 149 0 0 chr2 151522 151569 -253105014 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 2387 70 0 0 chr2 152488 152788 -253103795 - L1PA6 LINE L1 0 6154 5855 234 269 160 9 chr2 152792 153004 -253103579 + L1ME4a LINE L1 5865 6108 -13 187 317 29 10 chr2 154506 154610 -253101973 - MIR SINE MIR 0 262 157 2315 90 10 3 chr2 154921 155221 -253101362 - AluSq SINE Alu -11 302 1 207 266 11 68 chr2 156146 156323 -253100260 + (CAGGG)n Simple_repeat Simple_repeat 1 167 0 272 250 64 70 chr2 156349 156509 -253100074 + MIR SINE MIR 58 216 -46 378 316 9 47 chr2 156509 156724 -253099859 + MIR SINE MIR 1 207 -55 1059 182 20 20 chr2 157623 157876 -253098707 + L1MA4 LINE L1 6044 6296 -4 326 220 180 20 chr2 158112 158304 -253098279 + LTR52 LTR ERVL 9 169 -252 378 0 0 0 chr2 158304 158346 -253098237 + (TG)n Simple_repeat Simple_repeat 1 42 0 326 220 180 20 chr2 158346 158398 -253098185 + LTR52 LTR ERVL 169 397 -24 586 231 118 18 chr2 159250 159419 -253097164 + MER105 DNA DNA 1 186 -18 6378 232 63 56 chr2 159756 162766 -253093817 + L1M4b LINE L1 15 3035 -3922 231 36 0 0 chr2 162766 162794 -253093789 + (CAA)n Simple_repeat Simple_repeat 2 29 0 6378 232 63 56 chr2 162794 163671 -253092912 + L1M4b LINE L1 3035 3904 -3053 359 221 132 29 chr2 163676 163812 -253092771 + LTR16A1 LTR ERVL 296 445 -12 222 196 22 0 chr2 163823 163869 -253092714 + MIR SINE MIR 70 116 -146 247 282 155 0 chr2 164297 164400 -253092183 + L1ME LINE L1 5532 5650 -471 21 36 0 0 chr2 164572 164600 -253091983 + AT_rich Low_complexity Low_complexity 1 28 0 285 300 17 33 chr2 165443 165563 -253091020 + MER20 DNA MER1_type 100 217 -2 973 149 6 6 chr2 165732 165907 -253090676 + L1MB2 LINE L1 5288 5462 -721 3651 159 88 45 chr2 165923 167302 -253089281 - pTR5 LTR ERV1 -23 1683 31 1118 227 28 18 chr2 167305 167587 -253088996 + L1MB2 LINE L1 5885 6169 -2 246 128 0 0 chr2 167796 167835 -253088748 + (T)n Simple_repeat Simple_repeat 1 39 0 1660 113 0 0 chr2 167843 168055 -253088528 - AluSg SINE Alu -98 212 1 245 270 261 0 chr2 170733 170848 -253085735 - L1M4 LINE L1 -5477 1157 1013 921 232 161 39 chr2 171339 171899 -253084684 - MER92B LTR ERV1 -8 628 1 217 266 101 0 chr2 175243 175322 -253081261 + L2 LINE L2 3210 3296 -17 200 341 103 48 chr2 175471 175597 -253080986 - L2 LINE L2 -3 3269 3137 213 315 46 8 chr2 176050 176180 -253080403 - MIR SINE MIR -119 143 9 279 236 88 54 chr2 177785 177933 -253078650 - L1MC4a LINE L1 -1424 6384 6232 1333 193 227 14 chr2 178016 178369 -253078214 + MSTA LTR MaLR 1 428 0 416 244 25 10 chr2 179009 179146 -253077437 - L1M4 LINE L1 -5924 710 14 2176 122 140 8 chr2 179541 179919 -253076664 + MSTA LTR MaLR 1 428 0 3688 112 11 53 chr2 180453 181061 -253075522 + MER4B LTR ERV1 1 583 -27 543 101 0 0 chr2 182619 182698 -253073885 + (GGAA)n Simple_repeat Simple_repeat 3 81 0 34467 55 11 14 chr2 182798 187064 -253069519 - HERV17 LTR ERV1 -4377 4249 1 6059 62 30 5 chr2 187064 187825 -253068758 - LTR17 LTR ERV1 0 780 1 1240 226 98 18 chr2 238018 238457 -253018126 + HERV3 LTR ERV1 3412 3960 -976 1587 229 60 86 chr2 238530 239028 -253017555 + HERV3 LTR ERV1 3605 4089 -782 2781 244 2 0 chr2 239128 239657 -253016926 + HERV3 LTR ERV1 1175 1704 -6722 1987 229 11 0 chr2 239756 240127 -253016456 + HERV3 LTR ERV1 1634 2008 -6418 1240 115 6 33 chr2 240127 240310 -253016273 + AluSc SINE Alu 1 178 -131 593 234 14 7 chr2 240411 240552 -253016031 - Tigger1 DNA MER2_type -2275 143 2 673 188 108 5 chr2 240565 240751 -253015832 - L1MCa LINE L1 -3950 2476 2272 752 158 68 15 chr2 240753 240886 -253015697 - AluJ SINE Alu -16 296 157 638 213 41 0 chr2 241014 241136 -253015447 - AluJ SINE Alu -140 172 46 995 175 62 42 chr2 241160 241401 -253015182 - L1MCa LINE L1 -4175 2251 2001 2017 141 0 10 chr2 241401 241699 -253014884 + AluY SINE Alu 1 295 -16 995 175 62 42 chr2 241699 241765 -253014818 - L1MCa LINE L1 -4425 2001 1938 316 26 0 136 chr2 241885 242076 -253014507 + (GGGAGA)n Simple_repeat Simple_repeat 1 165 0 268 261 34 23 chr2 246201 246289 -253010294 - MLT1J2 LTR MaLR 0 450 362 324 316 24 36 chr2 246389 246557 -253010026 - MLT1J1 LTR MaLR -241 205 40 208 146 0 24 chr2 248475 248516 -253008067 + (CCCCCA)n Simple_repeat Simple_repeat 1 40 0 181 191 43 0 chr2 248793 248840 -253007743 - MIR SINE MIR -66 142 94 485 216 27 20 chr2 249115 249258 -253007325 + MSTC LTR MaLR 20 162 -203 512 244 189 11 chr2 250383 250563 -253006020 + MER20 DNA MER1_type 1 212 -7 362 283 65 62 chr2 252316 252687 -253003896 + L2 LINE L2 2941 3312 -1 4198 213 23 13 chr2 252875 254140 -253002443 + L1MB3 LINE L1 4898 6181 -2 451 299 81 15 chr2 258765 259099 -252997484 - L2 LINE L2 -734 2580 2225 26 0 0 0 chr2 259667 259693 -252996890 + AT_rich Low_complexity Low_complexity 1 26 0 343 267 114 23 chr2 260406 260537 -252996046 + Charlie8 DNA MER1_type 14 156 -2261 25 0 0 0 chr2 260761 260786 -252995797 + AT_rich Low_complexity Low_complexity 1 25 0 1873 150 0 27 chr2 260983 261276 -252995307 + AluJb SINE Alu 1 285 -27 208 237 26 35 chr2 261325 261439 -252995144 + A-rich Low_complexity Low_complexity 3 115 0 296 162 68 14 chr2 261482 261556 -252995027 - MER116 DNA Mariner -2 78 1 762 240 55 87 chr2 261777 262124 -252994459 - MLT1A1 LTR MaLR 0 365 29 4585 188 46 23 chr2 262126 262841 -252993742 - L1 LINE L1 -841 5305 4608 1796 96 46 0 chr2 262841 263081 -252993502 - AluY SINE Alu -20 291 41 4585 188 46 23 chr2 263081 263201 -252993382 - L1 LINE L1 -1538 4608 4492 4987 60 3 8 chr2 263201 263830 -252992753 - L1PA8 LINE L1 -1 6171 5546 4585 188 46 23 chr2 263830 264024 -252992559 - L1 LINE L1 -1654 4492 4248 324 0 0 0 chr2 264024 264060 -252992523 + (TG)n Simple_repeat Simple_repeat 2 37 0 4585 188 46 23 chr2 264060 264096 -252992487 - L1 LINE L1 -1898 4248 4214 1512 161 59 3 chr2 264232 264554 -252992029 - L1 LINE L1 -2437 3709 3370 983 267 64 20 chr2 264563 264953 -252991630 - L1 LINE L1 -3090 3056 2650 185 229 82 0 chr2 265213 265274 -252991309 + MIR SINE MIR 47 112 -150 1554 199 7 34 chr2 266416 266712 -252989871 - AluJb SINE Alu -24 288 1 10643 93 68 11 chr2 267450 269476 -252987107 - L1PBa LINE L1 -3938 2925 634 1295 152 0 0 chr2 269476 269674 -252986909 - L1PBa LINE L1 -6663 200 3 261 83 0 0 chr2 270913 270949 -252985634 + (TA)n Simple_repeat Simple_repeat 1 36 0 470 228 179 55 chr2 271804 272062 -252984521 - MLT1H LTR MaLR 0 549 314 1277 239 38 11 chr2 272147 272591 -252983992 + L1ME2 LINE L1 2121 2576 -3570 5331 255 91 37 chr2 272600 274409 -252982174 + L1ME2 LINE L1 2835 4544 -1620 6107 23 0 10 chr2 274409 275116 -252981467 + L1PA3 LINE L1 5452 6151 -4 5331 255 91 37 chr2 275116 276363 -252980220 + L1ME2 LINE L1 4544 6064 -100 1333 241 95 28 chr2 276363 276836 -252979747 + MLT1D LTR MaLR 1 505 0 5331 255 91 37 chr2 276836 276905 -252979678 + L1ME2 LINE L1 6064 6128 -36 2525 117 14 3 chr2 277256 277616 -252978967 + THE1B LTR MaLR 1 364 0 9795 116 38 38 chr2 277616 279196 -252977387 + THE1B-int LTR MaLR 1 1580 0 2239 124 74 0 chr2 279196 279535 -252977048 + THE1B LTR MaLR 1 364 0 225 203 72 29 chr2 279671 279740 -252976843 + L1ME2 LINE L1 6057 6128 -36 21 57 0 0 chr2 279851 279886 -252976697 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr2 281586 281609 -252974974 + AT_rich Low_complexity Low_complexity 1 23 0 1171 125 0 0 chr2 281843 282003 -252974580 - AluSg/x SINE Alu -16 294 135 1169 284 51 19 chr2 282403 282928 -252973655 + HAL1 LINE L1 799 1340 -1167 298 287 81 23 chr2 283179 283353 -252973230 + HAL1 LINE L1 2019 2202 -305 995 251 95 10 chr2 283614 283909 -252972674 + MER82 DNA MER2_type 306 625 -28 513 209 98 20 chr2 284414 284567 -252972016 - L1MB5 LINE L1 0 6174 6010 569 278 17 26 chr2 284575 284805 -252971778 + HAL1 LINE L1 1019 1246 -1261 4550 204 73 75 chr2 284905 286459 -252970124 - L1M4 LINE L1 -848 5298 3749 242 299 0 31 chr2 287571 287668 -252968915 + CT-rich Low_complexity Low_complexity 3 96 0 1755 157 14 17 chr2 288860 289154 -252967429 + AluJo SINE Alu 2 294 -18 5132 163 31 31 chr2 289478 290192 -252966391 - L1MA8 LINE L1 -4 6287 5573 2139 125 0 0 chr2 290192 290489 -252966094 + AluSx SINE Alu 1 297 -15 5132 163 31 31 chr2 290489 291022 -252965561 - L1MA8 LINE L1 -717 5574 5042 2341 186 28 24 chr2 291023 291491 -252965092 + L1MA8 LINE L1 4567 5036 -1110 21 0 0 0 chr2 291499 291520 -252965063 + AT_rich Low_complexity Low_complexity 1 21 0 1025 190 22 0 chr2 291568 291747 -252964836 - AluJb SINE Alu -3 309 127 809 278 69 39 chr2 292199 292606 -252963977 + L1ME4a LINE L1 5502 5920 -201 198 171 0 0 chr2 292841 292882 -252963701 + (TTA)n Simple_repeat Simple_repeat 2 42 0 358 238 48 55 chr2 293483 293671 -252962912 - MLT1A2 LTR MaLR -181 209 7 3045 148 30 0 chr2 294242 294748 -252961835 - L1MA4A LINE L1 0 6303 5783 249 266 0 0 chr2 294748 294842 -252961741 + (TG)n Simple_repeat Simple_repeat 2 95 0 1063 156 14 46 chr2 294845 295063 -252961520 - L1MA4A LINE L1 -514 5789 5579 260 245 21 32 chr2 296262 296356 -252960227 + L1ME3A LINE L1 5348 5440 -681 2168 144 69 15 chr2 297377 297781 -252958802 + MSTA LTR MaLR 1 426 -2 256 343 35 47 chr2 299652 299993 -252956590 + L1ME3A LINE L1 5609 5945 -225 239 261 14 0 chr2 300345 300414 -252956169 - MER5A DNA MER1_type -84 105 36 227 270 0 0 chr2 300508 300571 -252956012 + L1P LINE L1 4940 5002 -1144 703 271 171 39 chr2 300776 301395 -252955188 + L1MC4a LINE L1 5267 5967 -1841 1512 233 30 30 chr2 301535 301995 -252954588 - MLT1C LTR MaLR -2 465 6 333 194 32 0 chr2 302070 302132 -252954451 - AluJ/FLAM SINE Alu -216 86 23 531 256 70 44 chr2 302719 302989 -252953594 - MER97a DNA MER1_type? -16 878 602 845 106 12 32 chr2 302991 303235 -252953348 + (TTTC)n Simple_repeat Simple_repeat 1 239 0 722 167 13 51 chr2 303263 303419 -252953164 - FRAM SINE Alu 0 176 27 721 246 99 9 chr2 303463 303695 -252952888 - MER97b DNA MER1_type? -780 273 21 276 30 0 0 chr2 304051 304084 -252952499 + (TTA)n Simple_repeat Simple_repeat 2 34 0 181 211 0 0 chr2 305994 306032 -252950551 - MIR SINE MIR -67 141 104 669 213 35 0 chr2 306157 306298 -252950285 + MER20 DNA MER1_type 5 150 -69 440 247 283 11 chr2 306303 306586 -252949997 - MER57A LTR ERV1 -2 401 42 198 407 12 0 chr2 307325 307406 -252949177 + L2 LINE L2 3187 3268 -4 1267 191 100 16 chr2 308598 308918 -252947665 + MLT2C1 LTR ERVL 3 349 -48 467 182 30 0 chr2 310227 310326 -252946257 - MLT2C1 LTR ERVL -295 102 1 444 206 178 14 chr2 312679 312825 -252943758 - MER21B LTR ERV1 -365 498 329 392 51 0 17 chr2 317545 317604 -252938979 + L1PA6 LINE L1 6097 6154 0 186 289 0 0 chr2 318100 318152 -252938431 + L2 LINE L2 3262 3313 0 26 0 0 0 chr2 319458 319484 -252937099 + AT_rich Low_complexity Low_complexity 1 26 0 3290 145 6 15 chr2 320157 320687 -252935896 - MER1A DNA MER1_type -2 525 1 1670 195 33 0 chr2 322396 322698 -252933885 - AluJo SINE Alu 0 312 1 2489 111 45 0 chr2 324734 325093 -252931490 - THE1C LTR MaLR 0 375 1 321 303 82 65 chr2 326132 326485 -252930098 + HAL1b LINE L1 324 682 -666 402 276 77 7 chr2 326946 327146 -252929437 + L1M4 LINE L1 4061 4274 -1872 2310 185 18 25 chr2 327173 327410 -252929173 - Tigger2 DNA MER2_type 0 2718 2484 2527 60 0 3 chr2 327410 327711 -252928872 + AluY SINE Alu 1 300 -11 2310 185 18 25 chr2 327711 327922 -252928661 - Tigger2 DNA MER2_type -234 2484 2273 450 159 0 0 chr2 327912 327981 -252928602 - Tigger2 DNA MER2_type -2649 69 1 * 425 337 101 45 chr2 328147 328681 -252927902 - L1MEd LINE L1 -5003 1116 553 2090 181 37 16 chr2 329219 329655 -252926928 + MER65A LTR ERV1 1 445 0 2610 64 0 0 chr2 334654 334965 -252921618 - AluY SINE Alu 0 311 1 210 359 41 14 chr2 335260 335405 -252921178 - MIR SINE MIR -27 235 87 27 0 0 0 chr2 337645 337672 -252918911 + AT_rich Low_complexity Low_complexity 1 27 0 339 286 97 10 chr2 339387 339583 -252917000 + L1MDa LINE L1 188 400 -6140 725 219 38 50 chr2 340176 340414 -252916169 + L1MDa LINE L1 1048 1282 -5261 721 241 66 38 chr2 340425 340744 -252915839 - L1MDa LINE L1 -4344 2196 1869 356 69 0 52 chr2 340766 340824 -252915759 + Alu SINE Alu 248 302 0 305 313 91 0 chr2 340869 340968 -252915615 + L1MDa LINE L1 2091 2198 -4342 1044 98 0 0 chr2 341068 341211 -252915372 - L1P4 LINE L1 -449 5719 5577 887 102 0 0 chr2 341214 341352 -252915231 + L1P4 LINE L1 5410 5547 -621 246 277 0 15 chr2 341770 341835 -252914748 + CT-rich Low_complexity Low_complexity 5 68 0 631 288 245 8 chr2 343194 343725 -252912858 + L2 LINE L2 1294 1950 -1364 386 298 0 10 chr2 345791 345895 -252910688 + (CGTG)n Simple_repeat Simple_repeat 1 103 0 351 286 0 0 chr2 345909 346087 -252910496 + (TG)n Simple_repeat Simple_repeat 1 178 0 320 280 126 14 chr2 346448 346591 -252909992 + MIR SINE MIR 104 262 0 2074 116 7 0 chr2 347018 347312 -252909271 + AluSq SINE Alu 4 299 -14 248 305 107 15 chr2 347415 347546 -252909037 - MIR SINE MIR -89 173 31 352 237 13 0 chr2 348968 349120 -252907463 + (TG)n Simple_repeat Simple_repeat 1 154 0 627 188 0 18 chr2 351291 351456 -252905127 + CT-rich Low_complexity Low_complexity 1 162 0 200 300 83 0 chr2 351621 351681 -252904902 - L2 LINE L2 0 3272 3208 356 69 0 52 chr2 352545 352603 -252903980 + Alu SINE Alu 248 302 0 1654 233 43 31 chr2 352648 353435 -252903148 + L1MD1 LINE L1 2091 2890 -3650 836 148 32 0 chr2 353435 353590 -252902993 + L1MB2 LINE L1 6009 6168 -3 1654 233 43 31 chr2 353590 353717 -252902866 + L1MD1 LINE L1 2890 3014 -3526 2828 128 12 16 chr2 353758 353924 -252902659 - MSTA LTR MaLR 0 428 263 2884 107 81 2 chr2 353924 354303 -252902280 + MLT2A2 LTR ERVL 1 418 -35 519 17 0 0 chr2 354303 354363 -252902220 + (TA)n Simple_repeat Simple_repeat 2 61 0 2884 107 81 2 chr2 354363 354403 -252902180 + MLT2A2 LTR ERVL 418 453 0 2828 128 12 16 chr2 354403 354666 -252901917 - MSTA LTR MaLR -165 263 1 1906 293 108 11 chr2 354666 356049 -252900534 + L1MD1 LINE L1 3050 4579 -1961 594 120 40 0 chr2 356049 356149 -252900434 + MLT1B LTR MaLR 1 104 -286 300 295 0 42 chr2 356178 356273 -252900310 - Tigger7 DNA MER2_type -8 2479 2389 * 1210 238 15 8 chr2 356271 356536 -252900047 - Tigger7 DNA MER2_type -466 267 1 * 1302 161 25 84 chr2 356536 356846 -252899737 + MLT1B LTR MaLR 100 390 0 2005 270 36 8 chr2 356846 357568 -252899015 + L1MD1 LINE L1 4575 5316 -1224 2040 237 63 38 chr2 357578 358511 -252898072 + L1MD1 LINE L1 5358 6390 -246 267 103 0 0 chr2 358511 358550 -252898033 + (CATATA)n Simple_repeat Simple_repeat 2 40 0 2040 237 63 38 chr2 358550 358804 -252897779 + L1MD1 LINE L1 6390 6636 0 426 368 96 15 chr2 358965 359237 -252897346 + HAL1 LINE L1 32 325 -2182 475 256 144 6 chr2 359298 359458 -252897125 + MER5A DNA MER1_type 8 189 0 247 326 259 0 chr2 359554 359701 -252896882 - MER5A DNA MER1_type -1 188 4 414 286 36 0 chr2 359710 359850 -252896733 - MER5B DNA MER1_type -23 155 11 323 305 55 8 chr2 359851 359979 -252896604 + HAL1 LINE L1 476 609 -1898 228 300 90 0 chr2 361387 361487 -252895096 - LTR33A LTR ERVL -14 509 401 854 275 43 39 chr2 361770 362253 -252894330 - HAL1 LINE L1 -954 1553 1069 750 163 24 36 chr2 362259 362425 -252894158 + MER53 DNA DNA 1 164 -25 720 291 171 71 chr2 362430 363206 -252893377 - HAL1 LINE L1 -1399 1108 255 2232 121 129 5 chr2 363515 363896 -252892687 - MSTA LTR MaLR 0 428 1 2390 190 95 15 chr2 365631 366178 -252890405 + LTR59 LTR ERV1 1 591 -6 370 326 62 31 chr2 366826 367050 -252889533 - L3 LINE CR1 -730 847 617 225 188 42 0 chr2 367598 367646 -252888937 + MLT1I LTR MaLR 320 369 -40 221 321 107 13 chr2 368983 369142 -252887441 + MIR SINE MIR 21 194 -68 390 226 0 0 chr2 369337 369443 -252887140 + (TG)n Simple_repeat Simple_repeat 1 106 0 2650 214 97 6 chr2 369559 370196 -252886387 + MER44D DNA MER2_type 2 696 -9 192 306 0 0 chr2 370399 370448 -252886135 + L2 LINE L2 3261 3309 -4 183 129 0 0 chr2 370805 370836 -252885747 + (TCCA)n Simple_repeat Simple_repeat 3 33 0 530 115 36 24 chr2 370853 371018 -252885565 + (TCTA)n Simple_repeat Simple_repeat 4 170 0 21 0 0 0 chr2 372629 372650 -252883933 + AT_rich Low_complexity Low_complexity 1 21 0 485 121 77 0 chr2 373047 373138 -252883445 - L1PA13 LINE L1 0 6163 6066 195 375 0 0 chr2 373631 373695 -252882888 + L2 LINE L2 3206 3269 -3 282 29 0 0 chr2 373775 373810 -252882773 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 292 319 113 12 chr2 375378 375538 -252881045 + MER5A DNA MER1_type 1 176 -13 296 336 64 0 chr2 375556 375681 -252880902 - L3 LINE CR1 -156 1421 1289 2443 174 54 19 chr2 377179 377645 -252878938 + MER49 LTR ERV1 441 922 -1 1019 285 67 86 chr2 379159 380355 -252876228 + L1MEc LINE L1 1309 2630 -3933 2278 212 19 24 chr2 380361 380542 -252876041 + L1 LINE L1 4695 4875 -1271 3418 82 14 0 chr2 380542 380980 -252875603 + MLT2A1 LTR ERVL 1 444 0 2278 212 19 24 chr2 380980 381373 -252875210 + L1 LINE L1 4875 5266 -880 1621 166 65 9 chr2 381473 381798 -252874785 - MER49 LTR ERV1 -580 343 1 198 103 0 0 chr2 382861 382890 -252873693 + (TG)n Simple_repeat Simple_repeat 1 29 0 183 361 24 0 chr2 384045 384128 -252872455 + MIR SINE MIR 26 110 -152 352 265 66 22 chr2 385857 385993 -252870590 - L1ME4a LINE L1 -5 6116 5975 245 304 173 20 chr2 386162 386520 -252870063 - L1ME4a LINE L1 -382 5739 5327 40 67 0 0 chr2 386520 386595 -252869988 + AT_rich Low_complexity Low_complexity 1 75 0 24 32 0 0 chr2 387236 387267 -252869316 + AT_rich Low_complexity Low_complexity 1 31 0 601 307 116 59 chr2 387366 387937 -252868646 + HAL1b LINE L1 567 902 -944 344 331 180 0 chr2 387938 388110 -252868473 + HAL1b LINE L1 939 1141 -705 702 260 83 56 chr2 388202 388541 -252868042 + L1M4 LINE L1 2932 3279 -2867 398 328 43 14 chr2 388773 389194 -252867389 + L1M4 LINE L1 4724 5156 -990 2962 253 59 30 chr2 389258 390347 -252866236 + L1MB7 LINE L1 382 1501 -5041 1260 216 88 15 chr2 390347 390676 -252865907 - MLT1A1 LTR MaLR -3 362 10 1626 241 50 8 chr2 390694 391076 -252865507 - MLT1A1-int LTR MaLR -8 1727 1330 418 174 0 0 chr2 391244 391313 -252865270 - MLT1A1-int LTR MaLR -988 747 679 2788 206 16 21 chr2 391445 392026 -252864557 - MLT1A1-int LTR MaLR -1078 657 80 621 247 70 0 chr2 392128 392314 -252864269 + L1MB7 LINE L1 5153 5351 -1293 1699 227 118 12 chr2 392328 392830 -252863753 + L1MB7 LINE L1 6055 6609 -73 4926 208 25 6 chr2 392875 393963 -252862620 + L1PA15 LINE L1 1281 2399 -4398 * 5045 164 37 25 chr2 393952 395681 -252860902 + L1PA15 LINE L1 5082 6816 0 276 125 0 54 chr2 395695 395751 -252860832 + L1MB8 LINE L1 6125 6177 -1 2089 108 0 0 chr2 395759 396047 -252860536 + AluSg SINE Alu 1 288 -22 454 197 57 16 chr2 396055 396177 -252860406 + L1MC4a LINE L1 5365 5491 -2317 1039 270 48 64 chr2 396294 396809 -252859774 + L1MC4a LINE L1 5481 5987 -1821 365 278 81 73 chr2 396987 397260 -252859323 + L1MC4a LINE L1 6166 6440 -1368 294 165 18 49 chr2 397876 398040 -252858543 + GA-rich Low_complexity Low_complexity 2 160 0 259 273 112 56 chr2 398892 399053 -252857530 - L2 LINE L2 -18 3295 3126 443 272 180 22 chr2 399163 399663 -252856920 - L2 LINE L2 -338 2976 2398 340 231 204 0 chr2 400035 400143 -252856440 - L2 LINE L2 -908 2406 2277 48 0 0 0 chr2 401303 401351 -252855232 + AT_rich Low_complexity Low_complexity 1 48 0 699 219 44 61 chr2 401916 402144 -252854439 - L1MC1 LINE L1 0 6333 6110 23 33 0 0 chr2 402517 402547 -252854036 + AT_rich Low_complexity Low_complexity 1 30 0 384 121 0 0 chr2 402572 402630 -252853953 - MADE1 DNA Mariner -2 78 21 185 367 52 29 chr2 404700 404910 -252851673 + L2 LINE L2 2107 2321 -993 184 235 62 49 chr2 407269 407350 -252849233 + L3b LINE CR1 1243 1324 -259 1180 203 37 37 chr2 410255 410365 -252846218 - L1MC2 LINE L1 -1 6343 6234 2270 92 0 0 chr2 410365 410668 -252845915 - AluY SINE Alu -8 303 1 1180 203 37 37 chr2 410668 410878 -252845705 - L1MC2 LINE L1 -109 6235 6023 * 3474 218 121 38 chr2 410875 411742 -252844841 - L1MCb LINE L1 -4509 2055 1261 2009 110 0 7 chr2 411742 412024 -252844559 + AluSx SINE Alu 1 280 -32 351 0 0 0 chr2 412026 412065 -252844518 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 3474 218 121 38 chr2 412065 412840 -252843743 - L1MCb LINE L1 -5303 1261 216 2579 128 5 3 chr2 412840 413214 -252843369 + THE1C LTR MaLR 1 375 0 3474 218 121 38 chr2 413214 413448 -252843135 - L1MCb LINE L1 -6348 216 3 2056 107 0 0 chr2 415314 415618 -252840965 - AluSg SINE Alu 0 304 1 203 402 20 10 chr2 415630 415732 -252840851 + MIR SINE MIR 18 120 -142 199 261 204 23 chr2 416217 416305 -252840278 + L2 LINE L2 3209 3312 -1 204 280 0 0 chr2 416415 416465 -252840118 + L2 LINE L2 3229 3278 -35 406 266 129 0 chr2 418012 418136 -252838447 - MIR SINE MIR -5 257 118 226 307 118 24 chr2 419404 419531 -252837052 - MIR3 SINE MIR -67 141 3 359 229 72 0 chr2 420424 420507 -252836076 + MER58B DNA MER1_type 237 325 -16 397 55 58 58 chr2 421990 422343 -252834240 + (TG)n Simple_repeat Simple_repeat 1 353 0 483 45 62 57 chr2 422419 422596 -252833987 + (TG)n Simple_repeat Simple_repeat 1 178 0 218 266 112 71 chr2 422981 423150 -252833433 + MIR SINE MIR 8 183 -79 710 307 82 46 chr2 425585 426378 -252830205 - L1MEc LINE L1 -3537 2678 1895 263 344 67 5 chr2 426413 426608 -252829975 - L1MEc LINE L1 -4596 1800 1594 181 43 0 0 chr2 429642 429665 -252826918 - MIR SINE MIR -117 145 123 233 220 20 0 chr2 431715 431765 -252824818 + L3 LINE CR1 1242 1292 -285 201 372 73 3 chr2 433289 433467 -252823116 + MIR SINE MIR 12 203 -59 8355 143 39 6 chr2 434475 434536 -252822047 + L1MA3 LINE L1 3622 3680 -2625 528 59 0 0 chr2 434536 434604 -252821979 + (GAA)n Simple_repeat Simple_repeat 2 69 0 8355 143 39 6 chr2 434604 437136 -252819447 + L1MA3 LINE L1 3680 6305 0 252 379 91 26 chr2 439057 439321 -252817262 - L2 LINE L2 -27 3245 2965 261 325 78 48 chr2 439619 439887 -252816696 - L2 LINE L2 -489 2825 2550 336 290 6 56 chr2 439922 440084 -252816499 - L1ME2 LINE L1 -9 6155 6002 * 621 333 47 15 chr2 440074 440162 -252816421 - L1M4 LINE L1 -2479 3667 3583 1682 184 42 0 chr2 440162 440450 -252816133 - AluJb SINE Alu -12 300 1 621 333 47 15 chr2 440450 440764 -252815819 - L1M4 LINE L1 -2563 3583 3252 * 2217 250 51 22 chr2 440746 441577 -252815006 - L1MC3 LINE L1 -749 5397 5170 699 284 59 6 chr2 441639 441977 -252814606 - L1MC3 LINE L1 -2661 3485 3130 620 144 68 7 chr2 441984 442130 -252814453 + L1MA7 LINE L1 6130 6284 -7 319 319 42 0 chr2 442135 442301 -252814282 + L1ME3A LINE L1 5107 5279 -867 693 302 99 29 chr2 442436 442993 -252813590 + L1ME3A LINE L1 5354 5949 -221 328 203 27 0 chr2 442994 443068 -252813515 + L1MA8 LINE L1 6209 6284 -7 2174 108 0 51 chr2 443109 443425 -252813158 - AluSg SINE Alu -10 300 1 373 303 128 0 chr2 444137 444325 -252812258 + MER58C DNA MER1_type 1 212 -3 379 314 78 31 chr2 444971 445264 -252811319 + L1MC/D LINE L1 5501 5807 -2001 209 233 0 0 chr2 448477 448520 -252808063 + (TA)n Simple_repeat Simple_repeat 1 43 0 242 280 86 0 chr2 449199 449292 -252807291 + MER3 DNA MER1_type 79 179 -30 232 337 53 63 chr2 450223 450413 -252806170 - MIR SINE MIR -50 212 25 184 146 24 49 chr2 450781 450822 -252805761 + MER5B DNA MER1_type 124 163 -15 228 69 92 11 chr2 451573 451660 -252804923 + (TG)n Simple_repeat Simple_repeat 2 95 0 2545 111 14 0 chr2 452537 452896 -252803687 + THE1B LTR MaLR 1 364 0 663 300 55 40 chr2 454626 455026 -252801557 + MLT2D LTR ERVL 9 414 0 1606 201 57 52 chr2 458352 458759 -252797824 + LTR2 LTR ERV1 41 449 0 225 0 0 0 chr2 462723 462748 -252793835 + (T)n Simple_repeat Simple_repeat 1 25 0 371 329 150 31 chr2 462848 463207 -252793376 - L1M4 LINE L1 -1097 5049 4648 684 287 59 53 chr2 463253 463374 -252793209 - L1M4 LINE L1 -1635 4511 4392 6207 58 17 18 chr2 463374 464155 -252792428 - LTR17 LTR ERV1 0 780 1 684 287 59 53 chr2 464155 464709 -252791874 - L1M4 LINE L1 -1754 4392 3832 531 276 104 21 chr2 464705 465089 -252791494 - L1M4 LINE L1 -3529 2617 2202 * 3251 110 69 6 chr2 465767 466248 -252790335 + MER9 LTR ERVK 1 511 0 185 371 0 0 chr2 467320 467382 -252789201 + L2 LINE L2 3005 3066 -206 23 0 0 0 chr2 469252 469275 -252787308 + AT_rich Low_complexity Low_complexity 1 23 0 972 124 0 0 chr2 470235 470364 -252786219 + AluSq/x SINE Alu 1 129 -183 416 296 85 0 chr2 472381 472570 -252784013 - MER92B LTR ERV1 -421 215 11 2773 141 20 50 chr2 472668 473229 -252783354 - Tigger3(Golem) DNA MER2_type -1 3028 2485 261 182 0 0 chr2 473330 473385 -252783198 + GA-rich Low_complexity Low_complexity 4 58 0 704 184 101 10 chr2 473475 473682 -252782901 - MER33 DNA MER1_type -48 276 51 2351 92 0 13 chr2 474192 474496 -252782087 + AluSx SINE Alu 1 300 -12 21 36 0 0 chr2 475850 475878 -252780705 + GC_rich Low_complexity Low_complexity 1 28 0 195 69 0 0 chr2 475904 475933 -252780650 + (CGGGG)n Simple_repeat Simple_repeat 5 33 0 409 247 54 75 chr2 479866 480052 -252776531 + MER58C DNA MER1_type 28 209 -6 591 129 0 0 chr2 480901 480986 -252775597 + AluSg/x SINE Alu 208 292 -18 303 288 55 43 chr2 481834 481997 -252774586 - L2 LINE L2 -491 2823 2659 288 295 98 16 chr2 482048 482292 -252774291 + L1M4 LINE L1 2994 3257 -2889 24 32 0 0 chr2 482357 482388 -252774195 + AT_rich Low_complexity Low_complexity 1 31 0 426 333 56 59 chr2 482545 482833 -252773750 + L1MEc LINE L1 2099 2385 -4011 439 253 120 71 chr2 483072 483440 -252773143 - L1 LINE L1 -3126 3020 2635 282 260 153 45 chr2 483605 483913 -252772670 + L1M4 LINE L1 3884 4224 -1922 460 346 93 12 chr2 483962 484219 -252772364 + L1M4 LINE L1 4483 4760 -1386 306 129 32 32 chr2 484473 484597 -252771986 + (TTAA)n Simple_repeat Simple_repeat 4 127 0 266 332 45 31 chr2 484751 485040 -252771543 + MER97c DNA MER1_type? 781 1073 -17 246 141 54 11 chr2 485217 485309 -252771274 + (TAGA)n Simple_repeat Simple_repeat 2 97 0 350 137 99 19 chr2 485335 485496 -252771087 + (TAGA)n Simple_repeat Simple_repeat 2 175 0 195 119 34 34 chr2 485569 485628 -252770955 + (TAGA)n Simple_repeat Simple_repeat 3 61 0 2054 156 6 22 chr2 488738 489059 -252767524 - MER1B DNA MER1_type -23 316 1 860 203 183 40 chr2 489059 489308 -252767275 - Tigger3(Golem) DNA MER2_type -2741 288 4 218 306 9 4 chr2 490453 490689 -252765894 + (CA)n Simple_repeat Simple_repeat 1 237 0 269 309 6 0 chr2 490741 490916 -252765667 + (CATA)n Simple_repeat Simple_repeat 2 177 0 434 263 6 0 chr2 490932 491092 -252765491 + (CA)n Simple_repeat Simple_repeat 2 162 0 307 250 14 0 chr2 492699 492771 -252763812 - MER69 DNA AcHobo 0 2526 2454 209 301 88 18 chr2 496509 496622 -252759961 - MIR SINE MIR -60 148 28 1378 139 8 36 chr2 496622 496874 -252759709 + AluJb SINE Alu 58 302 -10 340 270 63 8 chr2 497081 497207 -252759376 + MLT1I LTR MaLR 270 402 -7 864 206 73 5 chr2 501418 501636 -252754947 - L1MA5A LINE L1 -1 6296 6064 253 319 66 58 chr2 502277 502491 -252754092 - L1M4 LINE L1 -1548 4598 4387 2490 48 0 0 chr2 502491 502802 -252753781 + AluYa5 SINE Alu 1 311 0 253 319 66 58 chr2 502802 503039 -252753544 - L1M4 LINE L1 -1759 4387 4143 538 262 117 41 chr2 504425 504917 -252751666 - L1MDa LINE L1 -4511 2029 1543 745 283 125 69 chr2 505150 505758 -252750825 - L1MDa LINE L1 -5426 1104 463 197 305 84 21 chr2 505794 505889 -252750694 - MIR SINE MIR -91 171 71 2695 101 3 3 chr2 506200 506575 -252750008 + THE1C LTR MaLR 1 375 0 1567 234 39 8 chr2 507492 507856 -252748727 - MLT1B LTR MaLR -15 375 1 281 274 89 24 chr2 508033 508157 -252748426 + MIR SINE MIR 117 248 -14 1618 139 204 38 chr2 508355 508722 -252747861 + MSTA LTR MaLR 1 428 0 7593 171 40 67 chr2 508722 510417 -252746166 + THE1B-int LTR MaLR 1 1649 -2 1698 161 75 32 chr2 510425 510772 -252745811 + THE1B LTR MaLR 1 362 -2 198 0 0 0 chr2 511225 511247 -252745336 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 884 222 13 3 chr2 511679 511994 -252744589 - MSTD LTR MaLR 0 396 1 403 233 78 0 chr2 512519 512635 -252743948 + MLT1D LTR MaLR 381 505 0 1927 110 10 52 chr2 512759 513067 -252743516 + AluSg SINE Alu 1 295 -15 188 132 0 26 chr2 516398 516436 -252740147 + (GAAAA)n Simple_repeat Simple_repeat 2 38 0 432 285 75 5 chr2 516863 517063 -252739520 + MER20 DNA MER1_type 6 219 0 1832 143 62 20 chr2 517738 518095 -252738488 + THE1C LTR MaLR 1 372 -3 24 32 0 0 chr2 518976 519007 -252737576 + AT_rich Low_complexity Low_complexity 1 31 0 407 307 72 23 chr2 521147 521411 -252735172 - L1ME4a LINE L1 -295 5826 5550 241 272 48 0 chr2 521482 521607 -252734976 - L1ME4a LINE L1 -2350 5458 5328 235 200 36 0 chr2 521769 521824 -252734759 - LTR40b LTR ERVL -2 460 404 281 365 11 11 chr2 523573 523751 -252732832 + (CA)n Simple_repeat Simple_repeat 2 179 0 2206 92 0 7 chr2 523926 524229 -252732354 - AluSx SINE Alu -11 301 1 2718 208 69 60 chr2 525573 526328 -252730255 - L1MC1 LINE L1 -1 6332 5571 828 151 0 0 chr2 526328 526474 -252730109 + CT-rich Low_complexity Low_complexity 3 148 0 506 190 8 0 chr2 526968 527089 -252729494 + GA-rich Low_complexity Low_complexity 3 124 0 222 37 0 0 chr2 527688 527715 -252728868 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 430 301 47 21 chr2 528439 528828 -252727755 + L1MEc LINE L1 1371 1823 -753 737 240 179 28 chr2 529046 529371 -252727212 + MLT1B LTR MaLR 1 374 -16 205 162 0 101 chr2 529475 529574 -252727009 + A-rich Low_complexity Low_complexity 2 90 0 434 281 42 32 chr2 530066 530578 -252726005 - MLT1G1 LTR MaLR -2 593 2 187 246 33 0 chr2 531053 531114 -252725469 + L2 LINE L2 3028 3090 -223 228 193 53 0 chr2 531311 531368 -252725215 - MIR SINE MIR -79 183 124 555 273 88 10 chr2 531723 531917 -252724666 - L1PB4 LINE L1 -6 6150 5942 219 264 31 92 chr2 532446 532609 -252723974 - L2 LINE L2 -52 3261 3109 584 135 19 19 chr2 534355 534459 -252722124 + L1MA4 LINE L1 6197 6300 0 214 294 29 0 chr2 539172 539240 -252717343 + CT-rich Low_complexity Low_complexity 3 72 0 346 264 36 43 chr2 539453 539476 -252717107 - L1M4 LINE L1 -3619 2527 2505 2278 188 43 8 chr2 539476 539945 -252716638 - MER66B LTR ERV1 -1 485 1 346 264 36 43 chr2 539945 540061 -252716522 - L1M4 LINE L1 -3641 2505 2389 258 248 152 41 chr2 540108 540253 -252716330 - L1P LINE L1 -3839 2307 2147 44 20 0 0 chr2 540864 540915 -252715668 + AT_rich Low_complexity Low_complexity 1 51 0 717 224 108 108 chr2 540915 541163 -252715420 - L1MC5 LINE L1 -79 7882 7635 2175 128 0 0 chr2 541163 541459 -252715124 - AluSx SINE Alu -16 296 1 717 224 108 108 chr2 541459 541847 -252714736 - L1MC5 LINE L1 -325 7636 7246 26 50 0 0 chr2 542132 542172 -252714411 + AT_rich Low_complexity Low_complexity 1 40 0 1211 166 67 9 chr2 543025 543248 -252713335 + MER46A DNA MER2_type 1 236 0 1670 221 195 44 chr2 543536 544289 -252712294 - Charlie1a DNA MER1_type -34 1421 555 273 283 146 34 chr2 544385 544618 -252711965 - Charlie1a DNA MER1_type -1054 401 143 657 236 28 34 chr2 544674 544852 -252711731 - Charlie1a DNA MER1_type -1277 178 2 239 212 26 13 chr2 544883 544991 -252711592 - L1P LINE L1 -2364 3782 3672 308 268 132 64 chr2 545615 545880 -252710703 - L1MEc LINE L1 -3188 3376 3094 214 175 35 18 chr2 546469 546526 -252710057 + (TCTCTG)n Simple_repeat Simple_repeat 3 60 0 361 296 103 57 chr2 546909 547277 -252709306 - L1MEc LINE L1 -4751 1994 1610 22 56 0 0 chr2 552715 552751 -252703832 + AT_rich Low_complexity Low_complexity 1 36 0 772 182 0 0 chr2 553847 553990 -252702593 + MER52A LTR ERV1 1613 1755 0 1818 164 125 3 chr2 554177 554536 -252702047 + MER57A LTR ERV1 1 403 0 3484 233 81 22 chr2 558138 559193 -252697390 - L1MC3 LINE L1 -166 7619 6503 2196 257 44 28 chr2 559181 559982 -252696601 - L1MCb LINE L1 -3034 3530 2717 * 1081 237 59 75 chr2 560008 560701 -252695882 - L1MCb LINE L1 -4849 1196 704 281 342 35 0 chr2 560758 560986 -252695597 + L1ME LINE L1 3340 3575 -2571 1198 94 0 0 chr2 560988 561148 -252695435 - L1PA7 LINE L1 -390 5764 5605 2959 60 5 21 chr2 561148 561546 -252695037 + L1PA7 LINE L1 5763 6158 0 896 282 119 31 chr2 561759 562642 -252693941 + L1ME LINE L1 3847 4807 -1339 589 190 0 0 chr2 562691 562812 -252693771 - L1PB1 LINE L1 -1588 4558 4438 * 5853 147 83 1 chr2 562808 563400 -252693183 + L1PB1 LINE L1 4553 5095 -1056 6075 71 84 14 chr2 563400 563474 -252693109 + L1PA8 LINE L1 5254 5321 -851 2343 92 0 38 chr2 563474 563611 -252692972 + AluSx SINE Alu 1 142 -170 3173 201 23 91 chr2 563611 564651 -252691932 - LTR5 LTR ERVK 0 969 1 2343 92 0 38 chr2 564651 564830 -252691753 + AluSx SINE Alu 142 305 -7 6075 71 84 14 chr2 564830 565610 -252690973 + L1PA8 LINE L1 5321 6168 -4 5853 147 83 1 chr2 565610 566471 -252690112 + L1PB1 LINE L1 5095 6143 -8 589 308 78 30 chr2 566834 567195 -252689388 + L1ME LINE L1 5276 5653 -509 242 285 85 8 chr2 567742 567872 -252688711 + L2 LINE L2 2154 2293 -1021 188 337 79 34 chr2 567985 568163 -252688420 + L2 LINE L2 3128 3313 0 1870 224 55 60 chr2 570247 570886 -252685697 - L1MB3 LINE L1 -14 6169 5534 303 286 7 82 chr2 571341 571488 -252685095 - L1M3 LINE L1 -586 5585 5450 1519 199 36 28 chr2 571593 571955 -252684628 + MLT1A1 LTR MaLR 1 365 0 298 333 27 0 chr2 572154 572265 -252684318 - L1MC5 LINE L1 -50 7911 7798 2264 261 72 42 chr2 572317 573392 -252683191 - L1M3 LINE L1 -2180 3966 2860 296 272 22 43 chr2 774428 774612 -252481971 + (CATA)n Simple_repeat Simple_repeat 1 180 0 257 278 23 40 chr2 774762 774938 -252481645 + (CATA)n Simple_repeat Simple_repeat 1 173 0 286 278 22 39 chr2 775096 775276 -252481307 + (CATA)n Simple_repeat Simple_repeat 1 177 0 1550 251 22 14 chr2 780020 780435 -252476148 - MLT1C LTR MaLR -14 453 36 1001 200 112 59 chr2 782191 782352 -252474231 - L1MA7 LINE L1 0 6291 6140 1611 165 7 4 chr2 782352 782624 -252473959 + AluJo SINE Alu 23 295 -17 1001 200 112 59 chr2 782624 782816 -252473767 - L1MA7 LINE L1 -151 6140 5918 458 191 62 0 chr2 784603 784730 -252471853 + MLT1C LTR MaLR 247 461 -6 228 333 78 16 chr2 784735 784864 -252471719 - MIR SINE MIR -102 160 24 224 232 0 18 chr2 785852 785908 -252470675 + GA-rich Low_complexity Low_complexity 2 56 0 195 171 49 0 chr2 785921 785962 -252470621 + L2 LINE L2 3210 3252 -20 225 368 0 0 chr2 798979 799150 -252457433 + (CAG)n Simple_repeat Simple_repeat 3 173 0 894 229 33 57 chr2 802301 802701 -252453882 + MLT2B1 LTR ERVL 1 479 -41 200 276 20 33 chr2 802723 802875 -252453708 + (TATATG)n Simple_repeat Simple_repeat 5 154 0 * 340 288 17 6 chr2 802827 803004 -252453579 + (TA)n Simple_repeat Simple_repeat 1 179 0 1791 32 0 23 chr2 804452 804669 -252451914 + AluY SINE Alu 84 295 -16 1225 264 35 5 chr2 804839 805206 -252451377 + MLT1B LTR MaLR 1 378 -12 21085 25 2 0 chr2 807416 810203 -252446380 + L1P1 LINE L1 2744 5535 -620 576 303 52 37 chr2 810353 810700 -252445883 - L1ME4a LINE L1 -243 5878 5523 2260 94 0 0 chr2 810764 811062 -252445521 - AluSg SINE Alu -12 298 1 265 286 66 0 chr2 811120 811211 -252445372 - L2 LINE L2 -3 3269 3173 2088 120 27 0 chr2 811548 811848 -252444735 - AluSx SINE Alu -4 308 1 718 256 94 12 chr2 812820 813074 -252443509 + ORSL DNA AcHobo 1 275 0 307 220 8 8 chr2 813287 813405 -252443178 + (CA)n Simple_repeat Simple_repeat 1 118 0 401 339 112 14 chr2 814000 814130 -252442453 + L1MC/D LINE L1 5249 5365 -1175 225 0 0 0 chr2 814130 814155 -252442428 + (CA)n Simple_repeat Simple_repeat 2 26 0 401 339 112 14 chr2 814155 814476 -252442107 + L1MC/D LINE L1 5365 5752 -788 23 68 0 0 chr2 814649 814693 -252441890 + AT_rich Low_complexity Low_complexity 1 44 0 14907 188 22 8 chr2 815514 818720 -252437863 - L1PB1 LINE L1 -1 6866 3553 2230 112 3 3 chr2 818720 819016 -252437567 - AluSq SINE Alu -17 296 1 14907 188 22 8 chr2 819016 821113 -252435470 - L1PB1 LINE L1 -3314 3553 1487 2225 217 39 0 chr2 821110 821604 -252434979 - L1PB1 LINE L1 -6345 518 6 * 290 286 57 26 chr2 821813 821986 -252434597 - LTR56 LTR ERV1 0 445 280 47 33 0 0 chr2 822132 822193 -252434390 + AT_rich Low_complexity Low_complexity 1 61 0 592 385 79 21 chr2 822260 822870 -252433713 - L1M4 LINE L1 -2022 4124 3480 180 0 0 0 chr2 824440 824460 -252432123 + (A)n Simple_repeat Simple_repeat 1 20 0 230 222 42 49 chr2 824460 824604 -252431979 - L1M2 LINE L1 -831 5460 5318 256 333 24 48 chr2 824974 825268 -252431315 - L1M4 LINE L1 -1311 4835 4549 4211 25 5 43 chr2 825414 825973 -252430610 + L1PA4 LINE L1 5615 6152 -3 1111 118 5 27 chr2 826050 826236 -252430347 + L1PA8A LINE L1 5950 6131 0 298 254 105 35 chr2 826734 827006 -252429577 + MER31B LTR ERV1 58 464 -2 325 267 42 48 chr2 827009 827174 -252429409 + MIR SINE MIR 33 196 -66 2284 126 0 0 chr2 829149 829458 -252427125 + AluSx SINE Alu 1 309 -3 829 275 113 24 chr2 829901 830327 -252426256 - MLT1C LTR MaLR -2 465 2 2360 89 0 23 chr2 830850 831154 -252425429 - AluSg SINE Alu -13 297 1 205 322 0 0 chr2 831942 832001 -252424582 - MIR SINE MIR -108 154 96 189 271 71 0 chr2 832163 832233 -252424350 - MER5A DNA MER1_type -83 106 32 459 196 29 22 chr2 833699 833837 -252422746 - L1MB3 LINE L1 -1 6182 6044 492 194 0 10 chr2 833837 833935 -252422648 - FLAM_C SINE Alu -16 127 31 225 0 0 0 chr2 835474 835499 -252421084 + (CCCCG)n Simple_repeat Simple_repeat 5 29 0 191 331 44 59 chr2 837604 837740 -252418843 - MIR SINE MIR -100 162 29 2451 98 0 0 chr2 839385 839691 -252416892 + AluSq SINE Alu 1 306 -7 188 288 0 45 chr2 840179 840245 -252416338 + L2 LINE L2 3207 3269 -3 2226 101 10 3 chr2 840653 840949 -252415634 - AluSg SINE Alu -11 299 2 306 0 0 0 chr2 842216 842250 -252414333 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 244 257 109 20 chr2 842257 842358 -252414225 - L2 LINE L2 -20 3252 3143 365 237 0 57 chr2 842572 842749 -252413834 + (TG)n Simple_repeat Simple_repeat 1 167 0 2395 63 7 23 chr2 844148 844448 -252412135 - AluY SINE Alu -16 295 1 1969 99 10 58 chr2 845334 845658 -252410925 - AluSq SINE Alu 0 313 4 4595 52 7 2 chr2 845818 846704 -252409879 + L1PA6 LINE L1 4972 5862 -292 2081 60 10 20 chr2 846804 847105 -252409478 + L1PA6 LINE L1 5857 6154 0 213 286 95 0 chr2 847749 847812 -252408771 + MIR SINE MIR 121 189 -73 1892 148 13 30 chr2 849027 849332 -252407251 + AluJo SINE Alu 1 300 -12 239 305 38 0 chr2 850161 850266 -252406317 - LTR16A1 LTR ERVL -348 109 1 414 0 0 0 chr2 851402 851448 -252405135 + (TG)n Simple_repeat Simple_repeat 2 47 0 2051 158 7 0 chr2 851926 852236 -252404347 + AluSx SINE Alu 1 312 0 237 83 0 0 chr2 852236 852272 -252404311 + (GGA)n Simple_repeat Simple_repeat 2 37 0 270 197 0 49 chr2 853963 854024 -252402559 + MIR SINE MIR 157 214 -48 193 212 30 106 chr2 855531 855597 -252400986 + MIR SINE MIR 87 147 -115 2470 45 0 86 chr2 856257 856594 -252399989 + AluY SINE Alu 1 308 -3 653 314 105 55 chr2 856794 857774 -252398809 + L1 LINE L1 2803 3896 -2250 715 270 51 70 chr2 857891 858261 -252398322 + MLT1D-int LTR MaLR 1004 1366 -5 1246 211 87 23 chr2 858321 858710 -252397873 + MLT1D LTR MaLR 92 505 0 181 268 89 0 chr2 858864 858920 -252397663 - MIR3 SINE MIR -52 156 96 316 309 114 11 chr2 860152 860327 -252396256 + Charlie2 DNA MER1_type 201 393 -2469 1248 262 112 26 chr2 860448 861074 -252395509 + Charlie2a DNA MER1_type 1495 2174 -688 258 292 31 46 chr2 861084 861214 -252395369 + MER94 DNA DNA 1 128 -6 526 252 47 28 chr2 861223 861477 -252395106 + Charlie2a DNA MER1_type 2182 2440 -422 21 0 0 0 chr2 862158 862179 -252394404 + AT_rich Low_complexity Low_complexity 1 21 0 230 174 130 0 chr2 865070 865116 -252391467 - MIR SINE MIR -86 176 125 404 300 25 0 chr2 865796 865956 -252390627 + (CATATA)n Simple_repeat Simple_repeat 4 167 0 2690 155 43 30 chr2 865964 866554 -252390029 - MER4B LTR ERV1 -10 769 1 231 36 0 0 chr2 866556 866584 -252389999 + (CA)n Simple_repeat Simple_repeat 2 29 0 732 265 87 16 chr2 866627 867182 -252389401 + L1ME2 LINE L1 4993 5578 -592 360 304 52 8 chr2 867272 867449 -252389134 + L1ME2 LINE L1 5881 6068 -102 784 167 0 0 chr2 870483 870615 -252385968 - FLAM_C SINE Alu 0 133 2 291 352 77 22 chr2 870763 870945 -252385638 - MIR SINE MIR -62 200 9 2192 89 101 24 chr2 871350 871688 -252384895 - THE1B LTR MaLR 0 364 1 1524 209 55 55 chr2 873623 874155 -252382428 - LTR55 LTR ERV -16 532 1 696 247 60 26 chr2 874486 874753 -252381830 - MER93b LTR ERV1 0 373 98 238 346 0 13 chr2 875932 876010 -252380573 - MIR SINE MIR -182 80 4 290 288 156 58 chr2 876325 876568 -252380015 + L2 LINE L2 2848 3114 -158 2535 76 0 0 chr2 878338 878642 -252377941 + AluY SINE Alu 1 304 -7 306 260 58 48 chr2 880199 880303 -252376280 - L2 LINE L2 -4 3268 3164 307 66 0 152 chr2 880699 881052 -252375531 + (CACCT)n Simple_repeat Simple_repeat 1 299 0 684 186 49 27 chr2 881878 882061 -252374522 + L1MA9 LINE L1 6088 6274 -38 2214 216 9 2 chr2 882087 882508 -252374075 - MSTB LTR MaLR -2 424 1 8805 198 15 5 chr2 882508 884142 -252372441 - MSTB-int LTR MaLR 0 1651 1 1616 181 13 9 chr2 884142 884457 -252372126 - MSTB LTR MaLR 0 426 111 583 237 30 6 chr2 884568 884737 -252371846 - LTR40b LTR ERVL -1 461 289 274 338 55 5 chr2 886313 886514 -252370069 + LTR40b LTR ERVL 152 362 -100 206 322 115 0 chr2 887912 887999 -252368584 + L2 LINE L2 3152 3248 -24 227 228 70 0 chr2 888409 888466 -252368117 + L2 LINE L2 3188 3248 -24 190 271 114 0 chr2 888805 888875 -252367708 + L2 LINE L2 3235 3312 -1 2902 136 160 9 chr2 889041 889571 -252367012 + MER4B LTR ERV1 1 610 0 710 296 67 63 chr2 893412 893932 -252362651 - MER34B LTR ERV1 0 565 44 1917 133 7 13 chr2 895045 895347 -252361236 - AluSx SINE Alu 0 312 13 699 268 95 13 chr2 901424 901805 -252354778 + MLT1D LTR MaLR 47 505 0 1448 153 71 124 chr2 903079 903530 -252353053 - L1MA9 LINE L1 -5 6307 5881 189 171 0 0 chr2 903530 903565 -252353018 + (TG)n Simple_repeat Simple_repeat 1 35 0 455 302 39 42 chr2 903619 903904 -252352679 + L1MD3 LINE L1 7697 7980 -15 613 216 6 17 chr2 907854 908035 -252348548 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 1983 181 43 5 chr2 908201 908576 -252348007 - MLT1B LTR MaLR -1 389 1 422 283 112 42 chr2 909818 910104 -252346479 + L1MC/D LINE L1 5304 5609 -750 2005 128 41 49 chr2 910116 910483 -252346100 + THE1B LTR MaLR 1 364 0 247 274 152 18 chr2 911239 911403 -252345180 - LTR16A LTR ERVL -17 433 248 432 237 61 23 chr2 911453 911584 -252344999 + MER93b LTR ERV1 17 152 -221 391 214 10 10 chr2 911660 911763 -252344820 + MER57A LTR ERV1 301 403 0 500 150 0 0 chr2 912373 912453 -252344130 - AluS SINE Alu -6 304 225 1051 231 77 19 chr2 912941 913253 -252343330 + MER44D DNA MER2_type 10 609 0 256 239 45 0 chr2 915466 915533 -252341050 - MIR SINE MIR -74 188 119 2460 83 5 117 chr2 916582 916992 -252339591 - THE1B LTR MaLR 0 364 1 24 53 0 0 chr2 917029 917067 -252339516 + AT_rich Low_complexity Low_complexity 1 38 0 523 269 42 0 chr2 917770 917937 -252338646 - MER45A DNA AcHobo -4 174 1 1999 163 77 27 chr2 919171 919575 -252337008 + MSTA LTR MaLR 1 424 -4 16215 61 9 18 chr2 919695 922571 -252334012 + L1PA6 LINE L1 3249 6154 0 359 275 101 20 chr2 922999 923148 -252333435 - MIR SINE MIR -2 260 100 377 155 71 12 chr2 923197 923281 -252333302 + MER110A LTR ERV1 82 170 -298 43408 52 5 1 chr2 923743 929858 -252326725 + L1PA5 LINE L1 11 6147 -7 322 276 26 0 chr2 930660 930736 -252325847 - MIR SINE MIR -68 194 117 1036 160 50 13 chr2 930998 931212 -252325371 + MSTA LTR MaLR 2 214 -141 2222 63 43 0 chr2 931212 931515 -252325068 - L1P LINE L1 -779 5367 5052 653 67 0 2 chr2 931514 931607 -252324976 + L1PA7 LINE L1 6051 6159 -9 * 1358 153 38 13 chr2 931617 931852 -252324731 + MSTA LTR MaLR 188 428 0 2500 50 0 0 chr2 932180 932480 -252324103 - AluY SINE Alu -11 300 1 5311 133 14 5 chr2 1133113 1133971 -252122612 + Tigger1 DNA MER2_type 1553 2418 0 195 237 0 0 chr2 1135924 1135962 -252120621 + L2 LINE L2 3211 3248 -24 272 250 13 26 chr2 1139216 1139292 -252117291 + MLT1J LTR MaLR 423 497 -14 2334 81 20 0 chr2 1144199 1144497 -252112086 - AluSq SINE Alu -9 304 1 207 0 50 50 chr2 1145036 1145076 -252111507 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 254 193 48 0 chr2 1145249 1145332 -252111251 + (CA)n Simple_repeat Simple_repeat 1 87 0 2699 58 0 0 chr2 1146840 1147151 -252109432 + AluY SINE Alu 1 311 0 263 292 23 29 chr2 1148020 1148191 -252108392 - L1ME4a LINE L1 -25 6096 5927 2155 115 16 3 chr2 1149939 1150243 -252106340 - AluSg SINE Alu -2 308 1 278 336 9 0 chr2 1153734 1153850 -252102733 + (CA)n Simple_repeat Simple_repeat 2 118 0 288 309 138 13 chr2 1154419 1154717 -252101866 + L2 LINE L2 2622 2956 -358 210 326 11 11 chr2 1154898 1154990 -252101593 + L2 LINE L2 3187 3278 -35 333 0 0 0 chr2 1155980 1156017 -252100566 + (TG)n Simple_repeat Simple_repeat 2 38 0 262 157 41 41 chr2 1158070 1158242 -252098341 + (CA)n Simple_repeat Simple_repeat 1 172 0 387 131 38 46 chr2 1158343 1158591 -252097992 + (CA)n Simple_repeat Simple_repeat 1 245 0 194 157 22 52 chr2 1158867 1159001 -252097582 + (CA)n Simple_repeat Simple_repeat 2 131 0 308 133 54 24 chr2 1159062 1159228 -252097355 + (CA)n Simple_repeat Simple_repeat 2 172 0 252 351 55 20 chr2 1159337 1159539 -252097044 + L2 LINE L2 1834 2042 -1272 594 0 0 0 chr2 1161077 1161143 -252095440 + (TC)n Simple_repeat Simple_repeat 2 67 0 246 394 42 13 chr2 1169928 1170164 -252086419 + L1MC4a LINE L1 5385 5627 -2181 1573 92 29 103 chr2 1170176 1170525 -252086058 + L1PA8 LINE L1 3104 3426 -2720 8211 93 6 3 chr2 1170525 1172525 -252084058 + L1PA8 LINE L1 4164 6166 -6 2011 123 14 0 chr2 1172608 1172884 -252083699 + AluSx SINE Alu 1 280 -32 207 0 0 0 chr2 1172884 1172907 -252083676 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 752 273 113 10 chr2 1172942 1173235 -252083348 + MER46C DNA MER2_type 1 323 -15 308 259 6 84 chr2 1173247 1173413 -252083170 + L1MC4a LINE L1 5713 5865 -1943 22 35 0 0 chr2 1173593 1173622 -252082961 + AT_rich Low_complexity Low_complexity 1 29 0 331 289 114 24 chr2 1174391 1174723 -252081860 + L1M4 LINE L1 2120 2481 -3665 1137 272 15 9 chr2 1174808 1175143 -252081440 - MER58B DNA MER1_type 0 341 5 562 304 39 5 chr2 1176178 1176382 -252080201 + Charlie8 DNA MER1_type 27 237 -2180 837 209 0 0 chr2 1177259 1177412 -252079171 - FRAM SINE Alu -12 164 12 229 262 159 37 chr2 1178335 1178442 -252078141 + MIR3 SINE MIR 39 158 -50 412 262 0 0 chr2 1181420 1181523 -252075060 + L1MB8 LINE L1 6076 6178 0 574 154 34 0 chr2 1182123 1182272 -252074311 + (TG)n Simple_repeat Simple_repeat 2 155 0 355 186 40 23 chr2 1182323 1182500 -252074083 + (TG)n Simple_repeat Simple_repeat 1 180 0 507 190 35 12 chr2 1182544 1182834 -252073749 + (TG)n Simple_repeat Simple_repeat 1 296 0 539 172 44 0 chr2 1182857 1183204 -252073379 + (TG)n Simple_repeat Simple_repeat 1 362 0 1992 121 32 24 chr2 1184155 1184495 -252072088 + MER61A LTR ERV1 1 343 0 2251 97 3 0 chr2 1185715 1186005 -252070578 + AluSq SINE Alu 1 291 -22 1508 139 15 120 chr2 1186157 1186481 -252070102 + AluJb SINE Alu 1 290 -12 196 294 134 8 chr2 1188872 1188991 -252067592 - MIR3 SINE MIR -54 154 21 471 317 87 0 chr2 1191299 1191482 -252065101 + MER58B DNA MER1_type 92 290 -51 227 231 192 46 chr2 1192203 1192333 -252064250 + MIR SINE MIR 113 261 -1 2232 124 0 3 chr2 1192558 1192857 -252063726 + AluSq SINE Alu 1 298 -15 207 0 0 0 chr2 1193706 1193729 -252062854 + (A)n Simple_repeat Simple_repeat 1 23 0 1119 72 0 0 chr2 1194020 1194172 -252062411 + L1PA8 LINE L1 6017 6168 -4 21 0 0 0 chr2 1194233 1194254 -252062329 + AT_rich Low_complexity Low_complexity 1 21 0 364 177 0 0 chr2 1197217 1197279 -252059304 + MLT1A2 LTR MaLR 4 65 -402 619 239 95 23 chr2 1199085 1199348 -252057235 + MER33 DNA MER1_type 43 324 0 527 233 47 31 chr2 1199484 1199677 -252056906 + L1ME LINE L1 815 1010 -5060 700 224 33 0 chr2 1200093 1200245 -252056338 + MER5A DNA MER1_type 33 189 0 234 307 24 87 chr2 1201580 1201707 -252054876 - MIR SINE MIR -57 151 33 240 271 0 57 chr2 1202169 1202239 -252054344 - MIR3 SINE MIR 0 208 143 2290 84 3 3 chr2 1202483 1202767 -252053816 + AluSq SINE Alu 1 284 -29 207 0 0 0 chr2 1202770 1202793 -252053790 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2334 111 0 0 chr2 1203110 1203417 -252053166 - AluSx SINE Alu -5 307 1 2006 106 0 4 chr2 1203680 1203945 -252052638 + AluSx SINE Alu 34 297 -15 1112 234 42 28 chr2 1204751 1205110 -252051473 + MLT1A1 LTR MaLR 2 365 0 1280 171 33 4 chr2 1205535 1205665 -252050918 - MER4A LTR ERV1 0 664 549 1949 91 12 4 chr2 1205665 1205956 -252050627 - AluSx SINE Alu 0 319 27 1280 171 33 4 chr2 1205956 1206073 -252050510 - MER4A LTR ERV1 -115 549 437 431 145 28 45 chr2 1207174 1207319 -252049264 - MER4A LTR ERV1 -203 461 261 601 141 0 10 chr2 1207319 1207418 -252049165 - MER4A LTR ERV1 -566 98 1 953 242 28 32 chr2 1212198 1212483 -252044100 + MLT1A2 LTR MaLR 62 345 -29 365 319 30 15 chr2 1212583 1212718 -252043865 - L1MC/D LINE L1 -2060 5748 5612 222 237 0 54 chr2 1213010 1213196 -252043387 + (CCA)n Simple_repeat Simple_repeat 2 177 0 410 214 0 33 chr2 1213232 1213414 -252043169 + (CCA)n Simple_repeat Simple_repeat 2 177 0 308 102 25 146 chr2 1213457 1213817 -252042766 + (CCCA)n Simple_repeat Simple_repeat 1 316 0 * 351 211 0 49 chr2 1213497 1213873 -252042710 + (CCA)n Simple_repeat Simple_repeat 1 357 0 345 194 0 54 chr2 1213988 1214174 -252042409 + (CCA)n Simple_repeat Simple_repeat 2 177 0 2347 88 3 3 chr2 1215241 1215538 -252041045 - AluSq SINE Alu -16 297 1 696 263 59 4 chr2 1217111 1217347 -252039236 - MER58 DNA MER1_type -2153 267 19 308 299 13 44 chr2 1218542 1218669 -252037914 + MIR SINE MIR 27 138 -124 2421 112 0 0 chr2 1218669 1218981 -252037602 + AluSx SINE Alu 1 312 0 308 299 13 44 chr2 1218981 1219051 -252037532 + MIR SINE MIR 138 209 -53 205 292 56 22 chr2 1219355 1219444 -252037139 - MIR3 SINE MIR -50 158 67 371 263 5 58 chr2 1220267 1220652 -252035931 + (CCAA)n Simple_repeat Simple_repeat 1 364 0 212 223 27 47 chr2 1220674 1220822 -252035761 + (CTACT)n Simple_repeat Simple_repeat 1 145 0 219 217 108 36 chr2 1220924 1221090 -252035493 + (CCCTA)n Simple_repeat Simple_repeat 1 178 0 365 102 17 0 chr2 1222330 1222389 -252034194 + (TG)n Simple_repeat Simple_repeat 1 60 0 715 201 5 9 chr2 1222391 1222947 -252033636 + GA-rich Low_complexity Low_complexity 1 554 0 255 169 46 15 chr2 1222976 1223041 -252033542 - MLT2D LTR ERVL -50 364 298 351 202 0 0 chr2 1223127 1223226 -252033357 + CT-rich Low_complexity Low_complexity 1 99 0 227 208 0 0 chr2 1223226 1223239 -252033344 + MLT2C2 LTR ERVL 408 420 -44 282 56 0 0 chr2 1223239 1223275 -252033308 + (CA)n Simple_repeat Simple_repeat 1 36 0 227 208 0 0 chr2 1223275 1223314 -252033269 + MLT2C2 LTR ERVL 419 460 -4 1216 220 11 11 chr2 1223426 1223712 -252032871 - MLT2D LTR ERVL -128 286 1 2121 46 85 0 chr2 1224069 1224352 -252032231 + AluY SINE Alu 1 305 0 297 295 101 22 chr2 1224925 1225064 -252031519 + MER105 DNA DNA 55 204 0 643 225 6 17 chr2 1225427 1225792 -252030791 + (TGGA)n Simple_repeat Simple_repeat 1 360 0 806 209 3 15 chr2 1225815 1226229 -252030354 + (TGGA)n Simple_repeat Simple_repeat 1 408 0 3041 198 16 7 chr2 1227122 1227798 -252028785 - L1 LINE L1 -1242 4904 4223 7424 23 0 1 chr2 1227823 1229107 -252027476 + L1PA3 LINE L1 4873 6155 0 997 160 21 46 chr2 1229111 1229349 -252027234 - L1 LINE L1 -795 5351 5120 2029 148 3 10 chr2 1230447 1230752 -252025831 - AluJb SINE Alu -9 303 1 1402 275 100 29 chr2 1230935 1231484 -252025099 - MER82 DNA MER2_type -60 593 6 543 304 61 101 chr2 1232045 1232074 -252024509 + L1ME4a LINE L1 5589 5618 -503 1105 72 0 13 chr2 1232074 1232226 -252024357 + L1PB1 LINE L1 5995 6144 -7 543 304 61 101 chr2 1232226 1232739 -252023844 + L1ME4a LINE L1 5618 6109 -12 21 0 0 0 chr2 1232735 1232756 -252023827 + AT_rich Low_complexity Low_complexity 1 21 0 * 252 0 0 0 chr2 1233667 1233695 -252022888 + (CA)n Simple_repeat Simple_repeat 1 28 0 2710 261 124 55 chr2 1234530 1235972 -252020611 + L1MEc LINE L1 35 1628 -4768 2382 97 0 7 chr2 1235972 1236282 -252020301 + AluSx SINE Alu 1 308 -4 2710 261 124 55 chr2 1236282 1236641 -252019942 + L1MEc LINE L1 1628 1961 -4435 12052 136 60 17 chr2 1236641 1237101 -252019482 - Tigger1 DNA MER2_type -5 2413 1974 2283 121 0 0 chr2 1237101 1237406 -252019177 + AluSc SINE Alu 1 305 -4 12052 136 60 17 chr2 1237406 1239058 -252017525 - Tigger1 DNA MER2_type -444 1974 210 898 154 4 150 chr2 1239064 1239298 -252017285 + AluJo SINE Alu 13 212 -100 2335 98 3 0 chr2 1240053 1240349 -252016234 - AluSx SINE Alu -11 301 5 1933 143 10 3 chr2 1241067 1241361 -252015222 - AluSx SINE Alu -16 296 1 229 318 36 55 chr2 1243225 1243335 -252013248 + L2 LINE L2 3145 3252 -20 654 142 0 28 chr2 1246119 1246260 -252010323 + (GGA)n Simple_repeat Simple_repeat 1 137 0 218 382 0 0 chr2 1246281 1246446 -252010137 + G-rich Low_complexity Low_complexity 1 165 0 21 57 0 0 chr2 1246724 1246759 -252009824 + GC_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 1247023 1247044 -252009539 + GC_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 1247057 1247078 -252009505 + GC_rich Low_complexity Low_complexity 1 21 0 180 261 0 0 chr2 1247369 1247415 -252009168 - MIR SINE MIR -10 252 207 308 267 125 17 chr2 1248188 1248308 -252008275 - MLT1F1 LTR MaLR -264 303 171 607 299 95 79 chr2 1250516 1251201 -252005382 - MER21B LTR ERV1 -147 716 21 225 287 23 11 chr2 1251397 1251484 -252005099 + L2 LINE L2 2271 2358 -956 1005 207 50 1 chr2 1252674 1252916 -252003667 + MLT2C1 LTR ERVL 61 343 -54 195 250 0 0 chr2 1252916 1253000 -252003583 + (TCCA)n Simple_repeat Simple_repeat 2 85 0 226 297 0 0 chr2 1253000 1253064 -252003519 + CT-rich Low_complexity Low_complexity 1 64 0 745 209 0 0 chr2 1254912 1255041 -252001542 + FLAM_C SINE Alu 1 129 -4 1844 179 74 60 chr2 1255288 1255723 -252000860 + MER41B LTR ERV1 105 384 -94 2377 95 3 0 chr2 1255723 1256017 -252000566 - AluSx SINE Alu -17 295 1 1844 179 74 60 chr2 1256017 1256105 -252000478 + MER41B LTR ERV1 384 469 -9 31 0 0 0 chr2 1256198 1256229 -252000354 + AT_rich Low_complexity Low_complexity 1 31 0 219 301 42 49 chr2 1256236 1256379 -252000204 - MIR SINE MIR -75 187 46 252 277 145 0 chr2 1257085 1257168 -251999415 + MIR SINE MIR 52 146 -62 198 282 214 8 chr2 1258809 1258926 -251997657 - MER5A DNA MER1_type -23 166 26 252 205 0 108 chr2 1258933 1259016 -251997567 - MER66A LTR ERV1 -13 465 392 2418 96 0 0 chr2 1259051 1259363 -251997220 + AluSx SINE Alu 1 312 0 21 0 0 0 chr2 1259407 1259428 -251997155 + AT_rich Low_complexity Low_complexity 1 21 0 2186 109 7 3 chr2 1259437 1259759 -251996824 + AluSq SINE Alu 1 313 0 322 262 91 9 chr2 1260604 1260718 -251995865 + MIR SINE MIR 30 151 -63 3338 170 25 47 chr2 1261379 1262164 -251994419 - pTR5 LTR ERV1 -730 1708 743 726 82 0 0 chr2 1262164 1262261 -251994322 - MER4B LTR ERV1 -96 514 418 39671 64 9 3 chr2 1262264 1268339 -251988244 + L1PA5 LINE L1 11 6124 -30 653 144 8 44 chr2 1268339 1268540 -251988043 - MER4A LTR ERV1 -173 593 264 521 146 31 10 chr2 1268543 1268639 -251987944 - MER4A LTR ERV1 -566 98 1 337 313 45 8 chr2 1268640 1268774 -251987809 + MLT1C LTR MaLR 43 181 -286 573 211 0 64 chr2 1269752 1269908 -251986675 + MER77 LTR ERV1 62 207 -398 228 261 35 78 chr2 1270128 1270243 -251986340 - MER5A DNA MER1_type 0 189 80 272 303 18 37 chr2 1270615 1270749 -251985834 - MIR SINE MIR -53 155 24 1750 176 0 29 chr2 1270865 1271171 -251985412 + AluJo SINE Alu 1 297 -15 2413 53 3 3 chr2 1271183 1271494 -251985089 + AluY SINE Alu 1 311 0 968 189 6 0 chr2 1271494 1271653 -251984930 + AluJo/FRAM SINE Alu 135 294 -18 721 247 52 51 chr2 1273603 1274005 -251982578 - MER67C LTR ERV1 -1 709 119 1037 134 21 5 chr2 1276175 1276361 -251980222 - MER65A LTR ERV1 -4 441 253 1584 216 71 0 chr2 1276363 1276728 -251979855 + MER57A LTR ERV1 3 393 -10 1254 188 4 16 chr2 1276745 1277001 -251979582 - MER65A LTR ERV1 -189 256 4 3435 131 15 71 chr2 1277280 1277630 -251978953 - MER41B LTR ERV1 0 635 340 756 188 0 0 chr2 1277630 1277763 -251978820 + FLAM_C SINE Alu 1 133 0 3435 131 15 71 chr2 1277763 1278085 -251978498 - MER41B LTR ERV1 -295 340 1 2368 110 0 0 chr2 1278389 1278689 -251977894 - AluSx SINE Alu -12 300 1 2146 117 3 0 chr2 1278913 1279203 -251977380 - AluSg SINE Alu -19 291 1 366 247 99 99 chr2 1279454 1279778 -251976805 - MER34C LTR ERV1 -3 582 259 639 261 0 6 chr2 1279866 1280023 -251976560 - MER34C LTR ERV1 -385 200 45 1480 176 53 7 chr2 1280192 1280476 -251976107 + MER57A LTR ERV1 107 403 0 242 250 33 58 chr2 1280930 1281050 -251975533 - LTR23 LTR ERV1 0 437 321 31 0 0 0 chr2 1281153 1281184 -251975399 + AT_rich Low_complexity Low_complexity 1 31 0 454 33 0 0 chr2 1281184 1281245 -251975338 - L1PA4 LINE L1 -3 6152 6092 403 52 0 0 chr2 1281251 1281309 -251975274 + L1PA2 LINE L1 5989 6046 -109 1204 199 77 3 chr2 1281310 1281622 -251974961 - LTR56 LTR ERV1 -110 335 1 383 206 178 9 chr2 1281622 1281728 -251974855 + MER34C LTR ERV1 115 238 -347 361 183 65 0 chr2 1281818 1281987 -251974596 + (CAG)n Simple_repeat Simple_repeat 1 180 0 311 172 63 29 chr2 1282121 1282295 -251974288 + (CAG)n Simple_repeat Simple_repeat 1 180 0 316 190 58 23 chr2 1282499 1282673 -251973910 + (CAG)n Simple_repeat Simple_repeat 1 180 0 383 254 66 104 chr2 1283180 1283467 -251973116 + MER34C LTR ERV1 310 585 0 186 350 60 0 chr2 1284041 1284141 -251972442 + MIR SINE MIR 59 164 -98 1318 240 122 22 chr2 1284148 1284446 -251972137 + MER39 LTR ERV1 1 268 -439 1565 263 142 12 chr2 1284446 1285016 -251971567 - LTR48B LTR ERV1 0 644 1 1318 240 122 22 chr2 1285016 1285308 -251971275 + MER39 LTR ERV1 268 691 -16 557 254 117 0 chr2 1285312 1285509 -251971074 - MER31A LTR ERV1 -249 236 17 2098 115 3 0 chr2 1285588 1285884 -251970699 - AluSx SINE Alu -13 299 3 1549 266 72 13 chr2 1286360 1286887 -251969696 + MER89 LTR ERV1 1 558 -1 439 83 0 0 chr2 1288611 1288671 -251967912 - MER4C LTR ERV1 0 465 406 5183 114 31 9 chr2 1288672 1289018 -251967565 + MER4E LTR ERV1 1 338 -441 1988 123 10 7 chr2 1289018 1289326 -251967257 + AluSg SINE Alu 1 309 -1 5183 114 31 9 chr2 1289326 1289741 -251966842 + MER4E LTR ERV1 338 779 0 368 306 78 29 chr2 1289760 1290045 -251966538 - L1ME4a LINE L1 -225 5896 5549 183 129 0 0 chr2 1292246 1292277 -251964306 + (TA)n Simple_repeat Simple_repeat 2 32 0 25 0 0 0 chr2 1292504 1292529 -251964054 + AT_rich Low_complexity Low_complexity 1 25 0 195 114 0 0 chr2 1293754 1293789 -251962794 + (TG)n Simple_repeat Simple_repeat 2 36 0 2316 103 0 0 chr2 1294883 1295195 -251961388 + AluSx SINE Alu 1 312 0 681 266 153 35 chr2 1298254 1298536 -251958047 + MER58B DNA MER1_type 27 341 0 1928 46 13 0 chr2 1299576 1299815 -251956768 - AluY SINE Alu -69 242 1 180 356 82 7 chr2 1301761 1301896 -251954687 + L3b LINE CR1 1291 1435 -148 2221 110 40 35 chr2 1302018 1302390 -251954193 + THE1C LTR MaLR 1 374 -1 242 340 43 0 chr2 1302943 1303037 -251953546 + MIR SINE MIR 86 183 -79 1024 113 69 13 chr2 1355009 1355168 -251901415 - AluSx SINE Alu -16 296 129 421 121 24 12 chr2 1355168 1355251 -251901332 + CT-rich Low_complexity Low_complexity 1 84 0 925 114 15 8 chr2 1355251 1355383 -251901200 - AluSx SINE Alu -180 133 1 1426 164 0 5 chr2 1356904 1357118 -251899465 + AluJb SINE Alu 2 214 -98 234 150 0 0 chr2 1357150 1357190 -251899393 + (GAAAA)n Simple_repeat Simple_repeat 4 43 0 725 145 5 43 chr2 1357190 1357376 -251899207 + GA-rich Low_complexity Low_complexity 2 180 0 641 130 0 68 chr2 1357348 1357540 -251899043 + (GGAA)n Simple_repeat Simple_repeat 1 179 0 * 619 175 9 38 chr2 1357502 1357742 -251898841 + GA-rich Low_complexity Low_complexity 1 232 0 * 735 159 6 28 chr2 1358671 1358853 -251897730 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 341 308 67 51 chr2 1358853 1359106 -251897477 - L1MEd LINE L1 -4903 1216 960 1017 43 12 24 chr2 1359129 1359293 -251897290 + (TCTA)n Simple_repeat Simple_repeat 3 164 0 1173 154 13 44 chr2 1359901 1360128 -251896455 - L1PB2 LINE L1 -8 6143 5924 396 92 67 17 chr2 1360185 1360305 -251896278 + (TCTA)n Simple_repeat Simple_repeat 4 129 0 227 342 70 27 chr2 1362121 1362308 -251894275 + L2 LINE L2 2905 3099 -173 323 305 24 54 chr2 1362891 1363058 -251893525 - MIR3 SINE MIR -15 193 32 735 158 38 0 chr2 1363808 1363941 -251892642 + L1PB4 LINE L1 6019 6156 0 405 206 109 0 chr2 1364350 1364442 -251892141 - Tigger1 DNA MER2_type 0 2418 2317 1159 206 25 4 chr2 1364444 1364720 -251891863 + L1MA4 LINE L1 6012 6293 -7 13293 138 42 4 chr2 1364939 1367140 -251889443 - Tigger1 DNA MER2_type -134 2284 1 278 297 71 34 chr2 1369148 1369414 -251887169 + L1ME4a LINE L1 5622 5897 -224 367 73 18 0 chr2 1369637 1369692 -251886891 - L1PB3 LINE L1 -3 6151 6096 361 189 301 35 chr2 1372045 1372188 -251884395 - MER5A DNA MER1_type -4 185 5 234 234 16 0 chr2 1372524 1372588 -251883995 + MLT1L LTR MaLR 550 614 -1 185 259 93 0 chr2 1375446 1375500 -251881083 - MIR SINE MIR -87 175 117 4532 176 26 6 chr2 1375590 1377361 -251879222 + L1PA16 LINE L1 4326 6166 0 22 56 0 0 chr2 1377685 1377721 -251878862 + AT_rich Low_complexity Low_complexity 1 36 0 2333 119 3 0 chr2 1377998 1378309 -251878274 - AluSx SINE Alu 0 312 1 595 351 39 0 chr2 1379694 1379999 -251876584 - MER58B DNA MER1_type 0 341 25 263 183 28 0 chr2 1380365 1380436 -251876147 + (CAGA)n Simple_repeat Simple_repeat 3 75 0 2504 64 0 0 chr2 1380849 1381145 -251875438 - AluY SINE Alu -15 296 1 294 184 105 26 chr2 1381197 1381273 -251875310 + L1PB4 LINE L1 6070 6151 -5 362 191 0 0 chr2 1382266 1382329 -251874254 - AluSx SINE Alu -5 295 233 1239 131 0 0 chr2 1382331 1382506 -251874077 - AluSx SINE Alu -137 175 1 25 0 0 0 chr2 1382689 1382714 -251873869 + AT_rich Low_complexity Low_complexity 1 25 0 419 243 30 65 chr2 1383024 1383193 -251873390 - MER5B DNA MER1_type -10 168 6 291 114 0 0 chr2 1384473 1384517 -251872066 + (TG)n Simple_repeat Simple_repeat 2 45 0 910 238 94 20 chr2 1384554 1384895 -251871688 - L1MD3 LINE L1 -8 7987 7622 1973 127 0 10 chr2 1384909 1385217 -251871366 - AluSx SINE Alu -7 305 1 839 128 6 70 chr2 1385275 1385344 -251871239 - AluSx SINE Alu -109 203 131 1915 68 0 12 chr2 1385344 1385592 -251870991 - AluY SINE Alu -16 295 51 839 128 6 70 chr2 1385592 1385678 -251870905 - AluSx SINE Alu -181 131 58 2098 99 7 0 chr2 1385905 1386198 -251870385 - AluSq SINE Alu -16 297 3 1705 144 0 75 chr2 1387342 1387463 -251869120 + AluJo SINE Alu 1 129 -183 180 0 0 0 chr2 1387463 1387483 -251869100 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1705 144 0 75 chr2 1387483 1387695 -251868888 + AluJo SINE Alu 129 309 -3 22 0 0 0 chr2 1389486 1389508 -251867075 + AT_rich Low_complexity Low_complexity 1 22 0 772 176 0 22 chr2 1389665 1389801 -251866782 - AluJb SINE Alu -11 301 169 329 379 38 17 chr2 1389802 1390037 -251866546 + L1ME4a LINE L1 5653 5892 -229 195 316 63 25 chr2 1390203 1390282 -251866301 + MIR SINE MIR 84 165 -97 22 35 0 0 chr2 1393175 1393204 -251863379 + AT_rich Low_complexity Low_complexity 1 29 0 2246 93 0 7 chr2 1394522 1394832 -251861751 + AluSg SINE Alu 3 310 0 182 333 76 31 chr2 1395082 1395436 -251861147 + L2 LINE L2 2257 2626 -688 297 284 115 34 chr2 1396097 1396246 -251860337 - MIR3 SINE MIR -51 157 44 434 216 128 24 chr2 1397395 1397520 -251859063 - MIR3 SINE MIR -26 182 45 207 226 19 0 chr2 1399880 1399933 -251856650 + (CAAA)n Simple_repeat Simple_repeat 2 55 0 198 91 0 0 chr2 1400257 1400290 -251856293 + (TTTAA)n Simple_repeat Simple_repeat 3 35 0 1777 45 45 0 chr2 1400290 1400513 -251856070 - AluY SINE Alu -27 284 52 187 70 116 0 chr2 1400841 1400884 -251855699 + A-rich Low_complexity Low_complexity 3 50 0 242 215 13 38 chr2 1401957 1402036 -251854547 + (CATATA)n Simple_repeat Simple_repeat 4 80 0 21 0 0 0 chr2 1402104 1402125 -251854458 + AT_rich Low_complexity Low_complexity 1 21 0 185 128 0 26 chr2 1403814 1403853 -251852730 + (GAAAA)n Simple_repeat Simple_repeat 3 40 0 1738 139 85 0 chr2 1407104 1407385 -251849198 - AluSx SINE Alu -7 305 1 1670 154 49 0 chr2 1408501 1408786 -251847797 - AluJb SINE Alu -13 299 1 231 311 78 0 chr2 1410280 1410370 -251846213 - MIR3 SINE MIR -16 192 96 643 123 61 0 chr2 1411321 1411435 -251845148 - L1PA15 LINE L1 -7 6158 6038 625 281 144 22 chr2 1413033 1413393 -251843190 - L2 LINE L2 -62 3251 2848 398 249 67 61 chr2 1414303 1414468 -251842115 + MER3 DNA MER1_type 40 205 -4 2414 53 3 0 chr2 1414515 1414818 -251841765 - AluY SINE Alu -7 304 1 222 214 29 14 chr2 1414831 1414901 -251841682 + (TA)n Simple_repeat Simple_repeat 1 71 0 213 139 0 0 chr2 1415203 1415246 -251841337 + (TC)n Simple_repeat Simple_repeat 2 44 0 387 0 0 0 chr2 1415273 1415316 -251841267 + (CA)n Simple_repeat Simple_repeat 2 44 0 297 230 107 89 chr2 1416097 1416271 -251840312 - MIR SINE MIR -50 212 36 1996 126 0 13 chr2 1416466 1416768 -251839815 - AluSp SINE Alu -15 298 1 197 239 65 98 chr2 1419228 1419320 -251837263 + MIR SINE MIR 117 205 -57 311 326 61 15 chr2 1422181 1422313 -251834270 + L1MC4 LINE L1 6582 6719 -1323 * 326 300 0 55 chr2 1422250 1422360 -251834223 - L1MC4 LINE L1 -1340 6702 6599 234 62 0 0 chr2 1422705 1422737 -251833846 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 576 184 0 0 chr2 1423531 1423678 -251832905 + CT-rich Low_complexity Low_complexity 1 147 0 207 179 0 0 chr2 1423704 1423743 -251832840 + CT-rich Low_complexity Low_complexity 2 40 0 25 75 0 0 chr2 1424275 1424328 -251832255 + AT_rich Low_complexity Low_complexity 1 53 0 1333 87 108 0 chr2 1424647 1424842 -251831741 - L1PA5 LINE L1 0 6154 5939 243 250 66 26 chr2 1425319 1425395 -251831188 + L2 LINE L2 3235 3313 0 352 303 61 36 chr2 1426110 1426275 -251830308 + MIR SINE MIR 86 254 -8 3334 106 42 15 chr2 1426506 1426986 -251829597 + MER1A DNA MER1_type 37 529 0 353 267 95 9 chr2 1427035 1427151 -251829432 + MIR3 SINE MIR 69 194 -14 464 277 85 43 chr2 1430545 1430733 -251825850 - MIR SINE MIR -2 260 65 254 294 50 89 chr2 1430712 1430892 -251825691 + MIR SINE MIR 79 251 -11 * 182 122 0 41 chr2 1431050 1431099 -251825484 + (CAGAGA)n Simple_repeat Simple_repeat 5 51 0 218 226 16 0 chr2 1431151 1431213 -251825370 + (CAGAGA)n Simple_repeat Simple_repeat 3 65 0 191 360 10 10 chr2 1431360 1431460 -251825123 - L2 LINE L2 -600 2714 2615 200 290 81 0 chr2 1432172 1432234 -251824349 + MIR SINE MIR 82 148 -60 30 59 0 0 chr2 1432555 1432606 -251823977 + AT_rich Low_complexity Low_complexity 1 51 0 186 43 0 0 chr2 1433232 1433255 -251823328 + (TTCC)n Simple_repeat Simple_repeat 1 23 0 813 133 7 46 chr2 1434526 1434677 -251821906 + FRAM SINE Alu 22 166 -10 2394 83 0 6 chr2 1434920 1435234 -251821349 + AluSx SINE Alu 1 312 0 1004 112 0 0 chr2 1438918 1439052 -251817531 + AluSq/x SINE Alu 1 134 -178 2014 128 0 0 chr2 1439055 1439344 -251817239 + AluSx SINE Alu 3 291 -21 2186 98 0 0 chr2 1439831 1440127 -251816456 + AluSx SINE Alu 1 296 -16 295 366 9 18 chr2 1440357 1440469 -251816114 - MIR3 SINE MIR -52 156 46 1203 124 0 0 chr2 1440971 1441156 -251815427 + L1MA2 LINE L1 6120 6304 0 290 143 44 0 chr2 1443627 1443718 -251812865 + (TA)n Simple_repeat Simple_repeat 2 96 0 267 130 29 14 chr2 1443747 1443816 -251812767 + (TA)n Simple_repeat Simple_repeat 1 70 0 349 333 42 0 chr2 1444045 1444165 -251812418 - MIR SINE MIR -50 212 88 186 43 0 0 chr2 1444960 1444983 -251811600 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 358 306 20 61 chr2 1445967 1446163 -251810420 - L2 LINE L2 -208 3064 2877 195 380 0 0 chr2 1446726 1446805 -251809778 + MIR SINE MIR 172 250 -12 21 0 0 0 chr2 1447420 1447441 -251809142 + AT_rich Low_complexity Low_complexity 1 21 0 1252 181 104 4 chr2 1447708 1447968 -251808615 - AluJo SINE Alu -26 286 1 2397 73 0 0 chr2 1447977 1448280 -251808303 - AluY SINE Alu -8 303 1 221 240 20 0 chr2 1449554 1449604 -251806979 + L2 LINE L2 3222 3272 0 228 122 0 0 chr2 1450782 1450823 -251805760 + (T)n Simple_repeat Simple_repeat 1 41 0 232 316 124 28 chr2 1452034 1452211 -251804372 + MIR SINE MIR 42 235 -27 581 126 0 0 chr2 1452213 1452300 -251804283 - AluJ/FLAM SINE Alu -225 87 1 218 333 0 0 chr2 1452917 1452977 -251803606 + L2 LINE L2 3205 3264 -8 2219 101 3 3 chr2 1453186 1453494 -251803089 + AluSq SINE Alu 1 308 -5 183 375 0 39 chr2 1453789 1453893 -251802690 + L2 LINE L2 3195 3294 -19 276 350 21 0 chr2 1453989 1454086 -251802497 + MIR SINE MIR 13 111 -151 1080 195 107 7 chr2 1454778 1455050 -251801533 - AluJb SINE Alu -13 299 1 5128 87 13 1 chr2 1456052 1456728 -251799855 + LTR8 LTR ERV1 8 691 0 310 317 7 7 chr2 1456925 1457067 -251799516 - L1ME4a LINE L1 -224 5897 5756 25 0 0 0 chr2 1458225 1458250 -251798333 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr2 1458343 1458365 -251798218 + AT_rich Low_complexity Low_complexity 1 22 0 385 283 76 7 chr2 1460693 1460854 -251795729 + MIR SINE MIR 3 167 -66 212 83 0 28 chr2 1462359 1462395 -251794188 + (GAAAA)n Simple_repeat Simple_repeat 1 35 0 180 307 120 0 chr2 1462787 1462862 -251793721 - L2 LINE L2 -5 3267 3184 22 35 0 0 chr2 1463006 1463035 -251793548 + AT_rich Low_complexity Low_complexity 1 29 0 354 305 48 45 chr2 1464440 1464837 -251791746 - HAL1 LINE L1 -1047 1460 1063 261 327 106 0 chr2 1465049 1465162 -251791421 - MIR SINE MIR -79 183 59 273 323 62 73 chr2 1465415 1465675 -251790908 + MER112 DNA MER1_type 3 259 -1 1874 130 29 69 chr2 1466148 1466524 -251790059 + THE1C LTR MaLR 15 375 0 474 294 0 0 chr2 1467397 1467643 -251788940 + CT-rich Low_complexity Low_complexity 1 246 0 269 331 0 0 chr2 1467794 1467963 -251788620 + CT-rich Low_complexity Low_complexity 3 171 0 290 322 0 6 chr2 1468050 1468230 -251788353 + CT-rich Low_complexity Low_complexity 1 179 0 283 325 0 0 chr2 1468351 1468520 -251788063 + CT-rich Low_complexity Low_complexity 3 171 0 229 346 0 0 chr2 1468433 1468612 -251787971 + (CTTG)n Simple_repeat Simple_repeat 2 180 0 * 445 278 6 6 chr2 1468901 1469081 -251787502 + (CCTG)n Simple_repeat Simple_repeat 1 180 0 244 329 0 0 chr2 1469059 1469301 -251787282 + (CATG)n Simple_repeat Simple_repeat 1 242 0 * 2794 209 86 38 chr2 1469397 1469707 -251786876 - L1MA9 LINE L1 -38 6274 5980 2032 138 0 0 chr2 1469707 1470012 -251786571 - AluSx SINE Alu -5 307 3 2794 209 86 38 chr2 1470012 1470183 -251786400 - L1MA9 LINE L1 -332 5980 5819 180 0 0 0 chr2 1470183 1470203 -251786380 + (TA)n Simple_repeat Simple_repeat 2 21 0 2794 209 86 38 chr2 1470203 1470491 -251786092 - L1MA9 LINE L1 -493 5819 5467 906 118 105 0 chr2 1470491 1470644 -251785939 - MER4C LTR ERV1 0 465 297 * 1246 116 0 5 chr2 1470637 1470826 -251785757 - MER4C LTR ERV1 -277 188 1 6334 201 19 39 chr2 1470827 1470862 -251785721 - L1MA9 LINE L1 -714 5469 5435 3109 165 100 27 chr2 1470862 1471539 -251785044 + LTR8A LTR ERV1 1 727 0 6334 201 19 39 chr2 1471539 1473205 -251783378 - L1MA9 LINE L1 -748 5435 3808 2238 207 57 117 chr2 1473865 1474245 -251782338 + L1MB8 LINE L1 4700 5101 -1077 2031 110 0 43 chr2 1474245 1474571 -251782012 + AluSx SINE Alu 1 312 0 2238 207 57 117 chr2 1474571 1475690 -251780893 + L1MB8 LINE L1 5101 6097 -81 2138 232 44 13 chr2 1475696 1476217 -251780366 + MER44D DNA MER2_type 9 600 -5 424 127 42 0 chr2 1476225 1476296 -251780287 + L1MB7 LINE L1 6101 6174 -10 353 329 91 11 chr2 1479175 1479449 -251777134 - L2 LINE L2 -4 3309 3014 381 102 0 0 chr2 1480771 1480830 -251775753 + (TCCA)n Simple_repeat Simple_repeat 3 61 0 2613 105 8 3 chr2 1482176 1482537 -251774046 + THE1B LTR MaLR 2 364 0 1869 154 14 0 chr2 1482925 1483218 -251773365 - AluJb SINE Alu -15 297 1 2415 74 0 0 chr2 1484689 1484987 -251771596 + AluY SINE Alu 1 298 -13 939 158 7 0 chr2 1485628 1485780 -251770803 + MER50 LTR ERV1 452 604 -130 446 213 11 20 chr2 1487253 1487368 -251769215 - L1MA6 LINE L1 -147 6154 6042 235 298 193 9 chr2 1491791 1491905 -251764678 - L2 LINE L2 -1 3271 3137 2440 119 25 0 chr2 1492325 1492679 -251763904 - THE1B LTR MaLR 0 364 2 2109 104 0 0 chr2 1493156 1493453 -251763130 - AluY SINE Alu 0 312 16 246 291 39 39 chr2 1497068 1497171 -251759412 + MIR3 SINE MIR 13 115 -93 538 360 93 15 chr2 1499438 1500298 -251756285 + L2 LINE L2 2345 3272 -41 1979 140 10 0 chr2 1500439 1500739 -251755844 + AluSx SINE Alu 1 303 -9 227 350 26 43 chr2 1500872 1500989 -251755594 + L2 LINE L2 3072 3186 -86 960 174 0 0 chr2 1502212 1502367 -251754216 + FRAM SINE Alu 5 159 -7 23 33 0 0 chr2 1503751 1503781 -251752802 + AT_rich Low_complexity Low_complexity 1 30 0 1060 259 4 0 chr2 1505064 1505307 -251751276 + MER47B DNA MER2_type 175 418 0 389 335 71 8 chr2 1505944 1506183 -251750400 + L2 LINE L2 490 743 -2571 352 235 147 59 chr2 1509182 1509421 -251747162 - L1MC4a LINE L1 -165 5956 5695 249 316 89 48 chr2 1509426 1509594 -251746989 - MIR SINE MIR 0 262 88 229 217 142 9 chr2 1509889 1509995 -251746588 - L1MC4a LINE L1 -2408 5400 5281 422 312 0 32 chr2 1512364 1512489 -251744094 + MIR SINE MIR 10 130 -132 219 69 0 0 chr2 1512507 1512536 -251744047 + (TAGA)n Simple_repeat Simple_repeat 4 32 0 2126 134 36 36 chr2 1512539 1512897 -251743686 + THE1B LTR MaLR 7 364 0 202 216 0 0 chr2 1512899 1512936 -251743647 + (TATATG)n Simple_repeat Simple_repeat 4 40 0 247 220 60 70 chr2 1512936 1513036 -251743547 + MIR SINE MIR 152 250 -12 4028 195 69 24 chr2 1514834 1516385 -251740198 + L1MB3 LINE L1 4571 6177 -6 249 291 34 11 chr2 1517784 1517959 -251738624 + (AGATG)n Simple_repeat Simple_repeat 1 179 0 23 0 0 0 chr2 1518348 1518371 -251738212 + AT_rich Low_complexity Low_complexity 1 23 0 249 33 0 0 chr2 1519442 1519472 -251737111 + (TCCA)n Simple_repeat Simple_repeat 1 30 0 1037 205 122 42 chr2 1519893 1520229 -251736354 - L1MD2 LINE L1 -10 6349 5987 3183 226 51 10 chr2 1520521 1521405 -251735178 - L1MD2 LINE L1 -324 6035 5120 311 313 12 38 chr2 1521419 1521579 -251735004 + L2 LINE L2 3158 3313 0 352 118 40 26 chr2 1523615 1523691 -251732892 + C-rich Low_complexity Low_complexity 2 78 0 403 192 10 10 chr2 1523710 1523809 -251732774 + CT-rich Low_complexity Low_complexity 1 99 0 24 67 0 0 chr2 1523898 1523943 -251732640 + AT_rich Low_complexity Low_complexity 1 45 0 879 292 134 60 chr2 1524771 1526421 -251730162 - HAL1 LINE L1 -3 2504 732 2230 132 0 0 chr2 1526512 1526823 -251729760 + AluSq SINE Alu 1 311 -2 1592 179 11 7 chr2 1527887 1528172 -251728411 + AluJb SINE Alu 21 306 -6 29 0 0 0 chr2 1528240 1528269 -251728314 + AT_rich Low_complexity Low_complexity 1 29 0 420 20 0 0 chr2 1528774 1528823 -251727760 + (CA)n Simple_repeat Simple_repeat 2 50 0 238 274 12 24 chr2 1529218 1529302 -251727281 - MIR SINE MIR -25 237 155 233 315 47 24 chr2 1529342 1529469 -251727114 + MIR SINE MIR 62 191 -71 437 303 106 31 chr2 1529792 1530405 -251726178 + L1ME LINE L1 4366 5024 -1122 562 205 131 0 chr2 1530417 1530539 -251726044 + FLAM_C SINE Alu 6 143 0 343 275 118 26 chr2 1530545 1530981 -251725602 + L1ME LINE L1 5030 5506 -656 2583 191 19 56 chr2 1532434 1532636 -251723947 - MER44D DNA MER2_type -1882 605 397 2187 102 3 3 chr2 1532636 1532916 -251723667 + AluSx SINE Alu 1 283 -29 189 0 0 0 chr2 1532916 1532937 -251723646 + (CAAT)n Simple_repeat Simple_repeat 4 24 0 2187 102 3 3 chr2 1532937 1532951 -251723632 + AluSx SINE Alu 282 295 -17 2583 191 19 56 chr2 1532951 1533319 -251723264 - MER44D DNA MER2_type -2090 397 1 1201 200 136 4 chr2 1533880 1534145 -251722438 + AluJo SINE Alu 3 302 0 3319 87 20 0 chr2 1535245 1535704 -251720879 + L1PA13 LINE L1 5696 6163 0 2269 103 0 0 chr2 1535707 1535988 -251720595 + AluSp SINE Alu 1 281 -32 261 0 0 0 chr2 1535988 1536017 -251720566 + (CAAT)n Simple_repeat Simple_repeat 4 32 0 362 216 0 9 chr2 1539481 1539592 -251716991 + (CA)n Simple_repeat Simple_repeat 2 111 0 508 238 39 33 chr2 1540797 1540978 -251715605 + MIR SINE MIR 22 203 -59 514 219 182 0 chr2 1541182 1541369 -251715214 + L1MC5 LINE L1 7008 7228 -733 938 246 56 58 chr2 1541519 1541797 -251714786 + L1MC5 LINE L1 7304 7583 -378 2046 97 29 14 chr2 1541797 1542098 -251714485 + AluSx SINE Alu 1 305 0 938 246 56 58 chr2 1542098 1542334 -251714249 + L1MC5 LINE L1 7583 7818 -143 2400 65 0 40 chr2 1544306 1544629 -251711954 + AluY SINE Alu 1 310 -1 30 45 0 0 chr2 1544884 1544928 -251711655 + AT_rich Low_complexity Low_complexity 1 44 0 435 149 0 0 chr2 1546151 1546225 -251710358 + (CA)n Simple_repeat Simple_repeat 1 74 0 311 204 66 72 chr2 1546288 1546455 -251710128 - L1MC4 LINE L1 -188 7854 7689 27 100 0 0 chr2 1546732 1546822 -251709761 + AT_rich Low_complexity Low_complexity 1 90 0 212 297 0 14 chr2 1546990 1547064 -251709519 + CT-rich Low_complexity Low_complexity 4 76 0 280 295 114 0 chr2 1547333 1547438 -251709145 + MIR SINE MIR 24 140 -122 269 266 75 0 chr2 1547745 1547839 -251708744 - L1MC4a LINE L1 -1910 5898 5798 190 328 74 16 chr2 1547960 1548082 -251708501 - MIR SINE MIR -5 257 129 21 0 0 0 chr2 1548853 1548874 -251707709 + AT_rich Low_complexity Low_complexity 1 21 0 307 294 103 38 chr2 1549856 1550040 -251706543 - MIR SINE MIR -29 233 38 555 278 57 10 chr2 1551186 1551395 -251705188 + MER58A DNA MER1_type 2 220 -4 198 103 0 0 chr2 1552478 1552507 -251704076 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2312 109 43 3 chr2 1554079 1554429 -251702154 + L1PA16 LINE L1 5793 6156 -10 368 82 16 0 chr2 1555946 1556007 -251700576 + (CA)n Simple_repeat Simple_repeat 2 63 0 24 103 0 0 chr2 1556047 1556134 -251700449 + AT_rich Low_complexity Low_complexity 1 87 0 22 70 0 0 chr2 1556470 1556513 -251700070 + AT_rich Low_complexity Low_complexity 1 43 0 1848 153 33 24 chr2 1558512 1558846 -251697737 - MER1B DNA MER1_type 0 337 1 340 273 80 33 chr2 1559026 1559176 -251697407 + MER103 DNA DNA 10 166 0 225 178 0 0 chr2 1559406 1559451 -251697132 + CT-rich Low_complexity Low_complexity 3 47 0 297 320 0 0 chr2 1561090 1561165 -251695418 + polypurine Low_complexity Low_complexity 3 77 0 497 99 0 0 chr2 1561265 1561336 -251695247 + L1P3 LINE L1 5384 5454 -700 265 127 0 111 chr2 1561327 1561390 -251695193 + L1MA8 LINE L1 6236 6291 0 * 366 290 55 45 chr2 1562938 1563138 -251693445 - L2 LINE L2 -534 2780 2579 205 316 11 0 chr2 1563193 1563288 -251693295 - L2 LINE L2 -939 2375 2280 223 353 88 0 chr2 1563567 1563703 -251692880 + L2 LINE L2 2211 2358 -956 1777 189 54 23 chr2 1563780 1563877 -251692706 - MLT1A1 LTR MaLR 0 365 272 1675 137 103 37 chr2 1563877 1564227 -251692356 + THE1C LTR MaLR 3 375 0 1777 189 54 23 chr2 1564227 1564483 -251692100 - MLT1A1 LTR MaLR -93 272 1 423 247 147 65 chr2 1566148 1566379 -251690204 - MIR SINE MIR 0 262 13 261 234 68 104 chr2 1567018 1567210 -251689373 + L1MB7 LINE L1 72 256 -6286 778 299 74 11 chr2 1567374 1567738 -251688845 + L1MB7 LINE L1 485 871 -5671 2433 267 49 39 chr2 1567925 1570056 -251686527 + L1MB7 LINE L1 946 3081 -3563 * 3218 219 29 54 chr2 1570044 1570132 -251686451 + L1MB7 LINE L1 4755 4844 -1838 1717 181 79 18 chr2 1570132 1570474 -251686109 + MLT1A1 LTR MaLR 3 365 0 3218 219 29 54 chr2 1570474 1570802 -251685781 + L1MB7 LINE L1 4844 5179 -1503 2421 76 0 22 chr2 1570802 1571119 -251685464 + AluY SINE Alu 1 310 -1 3218 219 29 54 chr2 1571119 1572129 -251684454 + L1MB7 LINE L1 5179 6140 -542 1417 208 7 13 chr2 1572152 1572460 -251684123 + L1MB7 LINE L1 6362 6667 -15 2241 89 0 11 chr2 1572998 1573318 -251683265 - AluSg SINE Alu 0 318 2 234 204 0 20 chr2 1575662 1575711 -251680872 + MLT1E LTR MaLR 113 160 -433 666 287 46 26 chr2 1575781 1576088 -251680495 + MLT1E LTR MaLR 281 593 0 280 281 12 12 chr2 1576908 1576990 -251679593 + L2 LINE L2 3187 3268 -4 240 357 25 25 chr2 1579182 1579378 -251677205 + MIR SINE MIR 44 239 -23 242 261 18 45 chr2 1580847 1580958 -251675625 - MIR3 SINE MIR -4 204 97 303 49 0 0 chr2 1580998 1581039 -251675544 + (TCTCTG)n Simple_repeat Simple_repeat 2 42 0 194 278 0 37 chr2 1581086 1581140 -251675443 + MIR SINE MIR 66 117 -91 2152 252 63 18 chr2 1581339 1581524 -251675059 + MER82 DNA MER2_type 12 187 -466 14525 135 26 18 chr2 1581524 1583917 -251672666 - Tigger1 DNA MER2_type 0 2418 5 2152 252 63 18 chr2 1583917 1584345 -251672238 + MER82 DNA MER2_type 187 653 0 22 0 0 0 chr2 1584359 1584381 -251672202 + AT_rich Low_complexity Low_complexity 1 22 0 6003 42 0 0 chr2 1584708 1585438 -251671145 - L1PA5 LINE L1 -743 5403 4674 6452 41 1 4 chr2 1585438 1586198 -251670385 + L1PA5 LINE L1 5390 6151 -3 21 0 0 0 chr2 1587320 1587341 -251669242 + AT_rich Low_complexity Low_complexity 1 21 0 1825 176 58 6 chr2 1589048 1589395 -251667188 + MSTB LTR MaLR 2 366 -60 716 199 28 33 chr2 1589780 1589961 -251666622 + MER20 DNA MER1_type 7 186 -33 206 245 20 0 chr2 1592728 1592777 -251663806 + (TCCA)n Simple_repeat Simple_repeat 4 53 0 791 183 4 0 chr2 1592798 1593068 -251663515 + (TCCA)n Simple_repeat Simple_repeat 1 271 0 351 0 0 0 chr2 1593897 1593936 -251662647 + (TG)n Simple_repeat Simple_repeat 2 40 0 21 36 0 0 chr2 1594193 1594221 -251662362 + AT_rich Low_complexity Low_complexity 1 28 0 1928 141 0 21 chr2 1597622 1597947 -251658636 + AluSx SINE Alu 1 319 0 226 292 60 77 chr2 1598264 1598432 -251658151 + MIR SINE MIR 81 245 -17 770 282 18 0 chr2 1598565 1598785 -251657798 + MER58A DNA MER1_type 1 224 0 441 0 0 0 chr2 1601168 1601217 -251655366 + (TA)n Simple_repeat Simple_repeat 1 49 0 306 287 39 39 chr2 1601614 1601743 -251654840 + L2 LINE L2 1744 1872 -1442 433 188 0 26 chr2 1601823 1601940 -251654643 + CT-rich Low_complexity Low_complexity 3 116 0 389 299 81 11 chr2 1602052 1602323 -251654260 - LTR16A LTR ERVL -16 434 145 221 311 19 9 chr2 1602498 1602604 -251653979 + L2 LINE L2 2229 2335 -979 223 277 40 30 chr2 1603879 1603980 -251652603 - MER5A DNA MER1_type -74 115 14 214 373 77 21 chr2 1605708 1605941 -251650642 + L2 LINE L2 3006 3251 -62 180 111 0 0 chr2 1605981 1606008 -251650575 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 452 232 48 16 chr2 1606543 1606668 -251649915 + L2 LINE L2 3185 3313 0 496 305 30 39 chr2 1607810 1608098 -251648485 + MLT1H1 LTR MaLR 12 297 -288 61 58 0 0 chr2 1609342 1609445 -251647138 + AT_rich Low_complexity Low_complexity 1 103 0 28 0 0 0 chr2 1611759 1611787 -251644796 + AT_rich Low_complexity Low_complexity 1 28 0 1898 98 4 23 chr2 1612501 1612765 -251643818 - AluSg SINE Alu -51 259 1 2312 90 0 13 chr2 1612767 1613068 -251643515 - AluSg SINE Alu -6 304 8 459 323 17 43 chr2 1613463 1613695 -251642888 + MIR SINE MIR 18 243 -19 360 0 0 0 chr2 1614128 1614168 -251642415 + (TG)n Simple_repeat Simple_repeat 1 40 0 180 0 0 0 chr2 1614167 1614187 -251642396 + (GA)n Simple_repeat Simple_repeat 1 20 0 * 1029 213 153 67 chr2 1614538 1614682 -251641901 + MLT1D LTR MaLR 1 131 -374 2065 130 138 5 chr2 1614682 1615060 -251641523 + MSTA LTR MaLR 1 428 0 1029 213 153 67 chr2 1615060 1615380 -251641203 + MLT1D LTR MaLR 131 505 0 2266 113 0 0 chr2 1615590 1615890 -251640693 - AluSx SINE Alu -12 300 1 321 315 87 8 chr2 1616727 1616854 -251639729 + L2 LINE L2 3136 3272 0 1177 73 12 6 chr2 1618380 1618545 -251638038 - L1PA13 LINE L1 -4 6159 5994 318 281 132 12 chr2 1619143 1619310 -251637273 + MIR SINE MIR 20 206 -56 1821 139 10 23 chr2 1619443 1619746 -251636837 - AluSq SINE Alu -14 299 1 21 0 0 0 chr2 1619927 1619948 -251636635 + AT_rich Low_complexity Low_complexity 1 21 0 355 340 69 14 chr2 1620061 1620349 -251636234 + L1 LINE L1 4031 4334 -1812 239 296 0 20 chr2 1620652 1620750 -251635833 + L1 LINE L1 4741 4836 -1310 2659 40 0 0 chr2 1620919 1621216 -251635367 + AluY SINE Alu 1 297 -14 2254 110 3 3 chr2 1623199 1623500 -251633083 - AluSc SINE Alu -8 301 1 3941 60 12 6 chr2 1623541 1624044 -251632539 + L1PA8 LINE L1 5662 6167 -5 1271 182 121 49 chr2 1625742 1626089 -251630494 + MLT1A2 LTR MaLR 1 372 -2 2823 85 3 6 chr2 1626415 1626780 -251629803 + THE1B LTR MaLR 1 364 0 2057 62 4 0 chr2 1627186 1627445 -251629138 + L1PA8 LINE L1 5662 5921 -251 11631 23 0 2 chr2 1628022 1630150 -251626433 + L1PA3 LINE L1 4031 6155 0 2225 85 0 72 chr2 1630630 1630968 -251625615 + AluSx SINE Alu 1 312 0 2393 90 3 0 chr2 1631715 1632025 -251624558 - AluY SINE Alu 0 311 1 1047 125 0 0 chr2 1632025 1632161 -251624422 - AluSq/x SINE Alu -177 136 1 21 0 0 0 chr2 1632605 1632626 -251623957 + AT_rich Low_complexity Low_complexity 1 21 0 2234 112 0 0 chr2 1633983 1634278 -251622305 - AluSx SINE Alu -16 296 2 421 97 0 0 chr2 1734278 1734340 -251522243 - Alu SINE Alu -256 62 1 337 221 11 11 chr2 1734369 1734464 -251522119 - L1PA16 LINE L1 -15 6151 6057 1306 200 69 145 chr2 1734468 1735034 -251521549 - MER66B-int LTR ERV1 -6153 523 1 2250 190 14 53 chr2 1735034 1735109 -251521474 - MER66B LTR ERV1 0 486 410 2060 141 3 3 chr2 1735109 1735407 -251521176 + AluSx SINE Alu 1 298 -14 2250 190 14 53 chr2 1735407 1735837 -251520746 - MER66B LTR ERV1 -76 410 1 320 347 91 21 chr2 1736947 1737232 -251519351 - L1M4 LINE L1 -1674 4472 4168 2310 53 0 0 chr2 1737237 1737501 -251519082 - AluY SINE Alu -46 265 2 256 109 0 0 chr2 1737507 1737553 -251519030 - L1P LINE L1 -3060 3086 3041 1167 94 0 13 chr2 1737559 1737708 -251518875 - AluSg SINE Alu -163 147 1 4073 199 17 3 chr2 1737708 1738603 -251517980 - L1 LINE L1 -1349 4797 3891 207 185 42 17 chr2 1738749 1738823 -251517760 - MIR SINE MIR -72 136 59 2616 61 0 3 chr2 1738848 1739160 -251517423 + AluY SINE Alu 1 311 0 207 0 0 0 chr2 1739404 1739427 -251517156 + (A)n Simple_repeat Simple_repeat 1 23 0 2541 91 0 0 chr2 1741429 1741738 -251514845 + AluSx SINE Alu 1 309 -3 2534 71 0 3 chr2 1743192 1743502 -251513081 - AluY SINE Alu -2 309 1 27 62 0 0 chr2 1743639 1743687 -251512896 + AT_rich Low_complexity Low_complexity 1 48 0 232 301 18 0 chr2 1743744 1743857 -251512726 + (TA)n Simple_repeat Simple_repeat 1 115 0 2330 97 0 7 chr2 1743939 1744238 -251512345 - AluSg SINE Alu -13 297 1 342 241 21 0 chr2 1744257 1744347 -251512236 + L1MC4 LINE L1 6550 6702 -1140 * 345 269 0 0 chr2 1744318 1744396 -251512187 - L1MC4 LINE L1 -1339 6703 6626 1077 68 0 0 chr2 1745402 1745534 -251511049 - AluSc SINE Alu -2 307 176 2316 96 0 3 chr2 1745950 1746243 -251510340 - AluSc SINE Alu -17 292 1 955 77 0 0 chr2 1746244 1746361 -251510222 - AluSc SINE Alu -192 117 1 1009 172 95 3 chr2 1747518 1747931 -251508652 + L1PA16 LINE L1 5926 6352 0 2032 89 4 0 chr2 1748541 1748789 -251507794 - AluSx SINE Alu -63 249 1 2287 102 10 0 chr2 1749401 1749695 -251506888 + AluSp SINE Alu 1 297 -16 2166 112 44 0 chr2 1750253 1750548 -251506035 + AluSx SINE Alu 3 310 -2 631 284 53 86 chr2 1751101 1751460 -251505123 + MER68 LTR ERV1 1 347 -215 2416 107 8 0 chr2 1751517 1751883 -251504700 - L1PB1 LINE L1 -1 6150 5782 343 344 0 0 chr2 1751908 1751998 -251504585 - L1MC4 LINE L1 -1339 6703 6614 * 351 225 25 25 chr2 1751947 1752027 -251504556 + L1MC4 LINE L1 6615 6694 -1348 386 287 67 0 chr2 1752134 1752284 -251504299 + L1M3f LINE L1 657 816 -4512 2167 131 3 10 chr2 1752284 1752598 -251503985 + AluSx SINE Alu 1 312 0 511 130 20 10 chr2 1752600 1752700 -251503883 + GA-rich Low_complexity Low_complexity 3 103 0 598 13 25 0 chr2 1752806 1752885 -251503698 + (GGAA)n Simple_repeat Simple_repeat 3 83 0 181 218 18 18 chr2 1753130 1753185 -251503398 - MIR SINE MIR -72 136 82 1443 216 7 0 chr2 1754779 1755061 -251501522 - ERVL LTR ERVL -1987 3777 3494 2397 102 0 0 chr2 1755156 1755460 -251501123 - AluSq SINE Alu -8 305 2 1379 182 4 16 chr2 1755473 1755720 -251500863 - ERVL LTR ERVL -2424 3340 3097 560 157 0 0 chr2 1755720 1755809 -251500774 - AluSg/x SINE Alu -15 295 207 2629 56 0 0 chr2 1755830 1756135 -251500448 - AluY SINE Alu -6 305 1 2156 117 0 13 chr2 1757132 1757432 -251499151 + AluSx SINE Alu 1 296 -16 2115 106 0 11 chr2 1757434 1757762 -251498821 + AluSg SINE Alu 1 325 0 643 166 101 0 chr2 1759343 1759482 -251497101 - L1MB5 LINE L1 -87 6087 5935 343 210 12 17 chr2 1759482 1759582 -251497001 + MER4D LTR ERV1 518 611 -168 430 123 27 0 chr2 1760846 1760919 -251495664 - FLAM_A SINE Alu -25 117 43 2637 40 0 7 chr2 1761475 1761779 -251494804 - AluY SINE Alu -9 302 1 2333 100 0 0 chr2 1762364 1762663 -251493920 + AluSx SINE Alu 1 299 -13 277 209 15 0 chr2 1763067 1763134 -251493449 - MIR SINE MIR -72 136 69 412 209 48 0 chr2 1763826 1763931 -251492652 + L1 LINE L1 3821 3930 -2216 1672 204 38 58 chr2 1764093 1764510 -251492073 + LTR2 LTR ERV1 41 449 0 3385 257 50 13 chr2 1764685 1766293 -251490290 - L1PBb LINE L1 -2082 4766 1008 482 272 51 31 chr2 1766478 1766732 -251489851 - L1PBb LINE L1 -5791 1058 800 262 220 17 0 chr2 1766816 1766875 -251489708 - L1PBb LINE L1 -6032 817 758 403 332 54 19 chr2 1767329 1767534 -251489049 - L1PBb LINE L1 -6428 421 210 380 282 178 0 chr2 1767676 1767878 -251488705 - L1PBb LINE L1 -6602 247 10 459 325 48 72 chr2 1768072 1768448 -251488135 - L1MEd LINE L1 -4901 1218 852 872 225 14 96 chr2 1768781 1769061 -251487522 + LTR42 LTR ERVL 3 259 -236 231 343 66 12 chr2 1769290 1769456 -251487127 + MER65A LTR ERV1 175 349 -96 * 2581 196 51 9 chr2 1769453 1769979 -251486604 - MER21A LTR ERV1 -8 923 376 1175 189 86 4 chr2 1769984 1770228 -251486355 - MER21A LTR ERV1 -667 264 1 851 314 4 4 chr2 1770315 1770554 -251486029 - MER8 DNA MER2_type 0 239 1 704 178 92 6 chr2 1770724 1770887 -251485696 + LTR42 LTR ERVL 315 491 -4 221 266 105 28 chr2 1775303 1775446 -251481137 + MIR3 SINE MIR 35 188 -20 344 271 51 11 chr2 1775622 1775840 -251480743 + MIR3 SINE MIR 15 243 -19 258 95 0 0 chr2 1775931 1775973 -251480610 + (TCC)n Simple_repeat Simple_repeat 1 42 0 477 298 148 22 chr2 1777164 1777611 -251478972 - L2 LINE L2 -1 3312 2810 1228 342 65 31 chr2 1778303 1778900 -251477683 + L1M4 LINE L1 2843 3473 -2673 417 86 0 0 chr2 1778900 1778958 -251477625 + (TG)n Simple_repeat Simple_repeat 1 58 0 1228 342 65 31 chr2 1778958 1779111 -251477472 + L1M4 LINE L1 3473 3619 -2527 1408 165 8 15 chr2 1779116 1779376 -251477207 + AluSx SINE Alu 3 260 -52 1329 201 15 6 chr2 1779396 1779725 -251476858 - L1 LINE L1 -1439 4707 4376 285 27 27 0 chr2 1779727 1779764 -251476819 + L1P5 LINE L1 5835 5872 -279 1040 134 0 0 chr2 1779768 1779917 -251476666 - AluJb SINE Alu -163 149 1 239 173 39 0 chr2 1780723 1780775 -251475808 - MIR SINE MIR -72 136 83 311 82 0 0 chr2 1782259 1782308 -251474275 + L1PB1 LINE L1 5342 5390 -761 2551 96 13 34 chr2 1782319 1782703 -251473880 + L1PB1 LINE L1 5776 6151 0 812 218 12 6 chr2 1782760 1782978 -251473605 - L1MB5 LINE L1 -293 5881 5659 1491 172 41 4 chr2 1782988 1783280 -251473303 - AluSx SINE Alu 0 307 6 255 254 54 0 chr2 1783913 1784043 -251472540 - Charlie2 DNA MER1_type -286 2576 2440 * 592 234 85 21 chr2 1784038 1784273 -251472310 - Charlie2 DNA MER1_type -577 2285 2036 1018 262 30 7 chr2 1784806 1785077 -251471506 + L1MB7 LINE L1 5887 6163 -21 1909 128 0 3 chr2 1785151 1785433 -251471150 + AluSq SINE Alu 1 281 -32 714 322 72 19 chr2 1785459 1785835 -251470748 + L1MCc LINE L1 50 445 -5978 585 260 36 49 chr2 1786077 1786300 -251470283 + L1MCc LINE L1 761 980 -5443 390 331 8 0 chr2 1786375 1786505 -251470078 + ERVL LTR ERVL 4147 4277 -1487 2230 104 7 0 chr2 1786963 1787272 -251469311 + AluSq SINE Alu 1 311 -2 1498 263 34 47 chr2 1787689 1787993 -251468590 + MLT1C LTR MaLR 2 299 -168 2433 65 0 3 chr2 1787993 1788303 -251468280 + AluY SINE Alu 1 309 -2 1498 263 34 47 chr2 1788303 1788470 -251468113 + MLT1C LTR MaLR 299 467 0 565 172 10 10 chr2 1788761 1788860 -251467723 + U6 snRNA snRNA 5 103 -4 350 62 0 62 chr2 1789026 1789090 -251467493 - AluSp/q SINE Alu 0 303 244 1240 93 0 0 chr2 1789090 1789252 -251467331 - AluSc SINE Alu -25 284 123 380 283 0 11 chr2 1789272 1789364 -251467219 - L1MC4 LINE L1 -1338 6704 6614 * 403 232 0 53 chr2 1789285 1789380 -251467203 + L1MC4 LINE L1 6614 6703 -1339 315 221 29 15 chr2 1789335 1789403 -251467180 - L1MCa LINE L1 -4362 2064 1996 * 300 238 59 50 chr2 1789465 1789566 -251467017 + L1MCc LINE L1 2478 2579 -4362 * 371 312 0 18 chr2 1789530 1789639 -251466944 - L1MC4 LINE L1 -1322 6720 6614 312 214 43 29 chr2 1789692 1789762 -251466821 - L1MCa LINE L1 -4361 2065 1995 301 337 0 22 chr2 1789693 1789782 -251466801 + L1MC4 LINE L1 6617 6703 -1339 * 354 252 0 28 chr2 1789781 1789888 -251466695 - L1MCa LINE L1 -1339 6983 1995 228 239 23 0 chr2 1789900 1789988 -251466595 - L1MC4 LINE L1 -1339 6703 6614 321 305 10 0 chr2 1790000 1790099 -251466484 - L1MC4 LINE L1 -1339 6983 1996 * 324 212 45 0 chr2 1790072 1790138 -251466445 - L1MC4 LINE L1 -4362 2064 1996 396 237 60 0 chr2 1790166 1790268 -251466315 - L1MC4 LINE L1 -1339 6983 1986 252 140 80 0 chr2 1790297 1790347 -251466236 + MLT2A1 LTR ERVL 391 444 0 2022 281 81 7 chr2 1790347 1790937 -251465646 - L1M2a LINE L1 -6376 792 159 2092 221 11 33 chr2 1790938 1791218 -251465365 + L1PA15-16 LINE L1 1771 2056 -4741 2230 102 3 6 chr2 1791218 1791531 -251465052 + AluSq SINE Alu 1 312 -1 2092 221 11 33 chr2 1791531 1791974 -251464609 + L1PA15-16 LINE L1 2056 2488 -4309 420 56 0 0 chr2 1791974 1792028 -251464555 - Alu SINE Alu -11 300 247 5565 205 62 11 chr2 1792042 1792248 -251464335 + L1M1 LINE L1 271 465 -7100 2130 124 0 3 chr2 1792248 1792555 -251464028 - AluSg SINE Alu -4 306 1 5565 205 62 11 chr2 1792555 1793486 -251463097 + L1M1 LINE L1 465 1465 -6100 2289 82 0 7 chr2 1793487 1793814 -251462769 - AluSp SINE Alu 0 313 2 2338 75 0 28 chr2 1793933 1794253 -251462330 - AluY SINE Alu 0 311 1 322 266 37 40 chr2 1794430 1794570 -251462013 + L1MC4 LINE L1 1919 6983 -1339 1417 210 0 7 chr2 1794571 1794857 -251461726 - AluJo SINE Alu -26 286 3 211 250 29 15 chr2 1798890 1798958 -251457625 + MIR3 SINE MIR 93 161 -47 349 274 58 2 chr2 1799087 1799245 -251457338 + MIR SINE MIR 21 187 -65 374 288 40 19 chr2 1799556 1799790 -251456793 + MIR SINE MIR 10 250 -12 195 42 0 0 chr2 1799885 1799909 -251456674 + (TCC)n Simple_repeat Simple_repeat 1 24 0 543 297 149 14 chr2 1801064 1801508 -251455075 - L2 LINE L2 0 3313 2810 682 329 105 19 chr2 1802215 1802643 -251453940 + L1M4 LINE L1 2855 3319 -2827 477 103 64 0 chr2 1802657 1802735 -251453848 - L1PA13 LINE L1 0 6163 6081 2199 78 3 0 chr2 1802755 1803062 -251453521 - AluSx SINE Alu 0 308 1 2081 100 3 47 chr2 1803590 1803932 -251452651 - AluY SINE Alu 0 311 1 1700 158 3 7 chr2 1803936 1804220 -251452363 - AluJb SINE Alu -21 291 9 1265 105 18 11 chr2 1804787 1804999 -251451584 - MLT2A2 LTR ERVL 0 453 286 368 282 35 38 chr2 1805220 1805447 -251451136 + MIR SINE MIR 10 243 -19 1633 136 20 37 chr2 1805775 1806069 -251450514 - AluJb SINE Alu -11 301 13 1650 154 0 25 chr2 1806122 1806407 -251450176 + AluJb SINE Alu 19 296 -16 234 0 0 0 chr2 1806407 1806433 -251450150 + (TA)n Simple_repeat Simple_repeat 2 27 0 2421 47 7 0 chr2 1806976 1807275 -251449308 - AluY SINE Alu -10 301 1 2255 102 0 9 chr2 1807778 1808093 -251448490 - AluSx SINE Alu 0 312 1 198 0 0 0 chr2 1809132 1809154 -251447429 + (TA)n Simple_repeat Simple_repeat 2 23 0 1278 221 3 0 chr2 1809172 1809457 -251447126 - AluJo SINE Alu -19 293 8 481 333 23 27 chr2 1814011 1814230 -251442353 - L1MCc LINE L1 -5978 445 228 513 311 118 52 chr2 1814345 1814476 -251442107 + L1ME3 LINE L1 5480 5601 -561 1999 111 3 55 chr2 1814476 1814801 -251441782 + AluSg SINE Alu 1 308 -2 513 311 118 52 chr2 1814801 1815135 -251441448 + L1ME3 LINE L1 5601 5976 -186 4316 185 24 23 chr2 1815310 1815440 -251441143 - L1MA4 LINE L1 -7 6293 6165 1877 141 3 0 chr2 1815440 1815731 -251440852 - AluSx SINE Alu -20 292 1 4316 185 24 23 chr2 1815731 1816466 -251440117 - L1MA4 LINE L1 -135 6165 5427 3760 203 21 5 chr2 1817219 1818153 -251438430 + L1 LINE L1 4342 5290 -856 355 312 51 65 chr2 1819310 1819586 -251436997 - L1MEd LINE L1 -4920 1199 928 1945 137 0 3 chr2 1819600 1819892 -251436691 - AluSq SINE Alu -20 293 3 1322 230 3 0 chr2 1820897 1821201 -251435382 - AluJo SINE Alu 0 312 8 184 295 16 0 chr2 1822718 1822779 -251433804 + MIR SINE MIR 82 143 -65 755 189 53 6 chr2 1823218 1823387 -251433196 - LTR42 LTR ERVL -4 491 315 213 39 0 0 chr2 1823505 1823531 -251433052 + (TAAAAA)n Simple_repeat Simple_repeat 3 28 0 928 289 4 4 chr2 1823558 1823790 -251432793 + MER8 DNA MER2_type 2 233 -6 2075 215 71 9 chr2 1823882 1824513 -251432070 + MER21A LTR ERV1 1 782 -149 949 56 0 0 chr2 1824507 1824632 -251431951 + LTR10C LTR ERV1 96 220 -371 * 21 36 0 0 chr2 1826098 1826126 -251430457 + AT_rich Low_complexity Low_complexity 1 28 0 1965 215 88 19 chr2 1826295 1826761 -251429822 + L1P LINE L1 11 508 -5638 1424 210 4 4 chr2 1827085 1827361 -251429222 - AluJo SINE Alu -26 286 11 2138 105 32 0 chr2 1829269 1829554 -251427029 + AluSg1 SINE Alu 1 294 -15 1108 36 7 0 chr2 1830547 1830685 -251425898 - L1PA4 LINE L1 -2 6153 6015 563 206 201 40 chr2 1831047 1831246 -251425337 - MLT1D LTR MaLR -3 502 272 208 308 0 0 chr2 1831246 1831311 -251425272 + (TAGA)n Simple_repeat Simple_repeat 2 66 0 190 257 115 35 chr2 1933453 1933566 -251323017 - MER5C DNA MER1_type -202 122 1 972 264 54 20 chr2 1934150 1934502 -251322081 + MLT1A1 LTR MaLR 2 365 0 568 241 41 6 chr2 1935758 1935928 -251320655 - MLT1B LTR MaLR -6 384 209 238 83 0 56 chr2 1936023 1936059 -251320524 - MLT1B LTR MaLR -356 34 1 517 274 148 16 chr2 1936800 1937173 -251319410 + L2 LINE L2 2244 2665 -649 1073 163 24 0 chr2 1938263 1938472 -251318111 + L1MA4 LINE L1 6081 6294 -6 383 200 0 11 chr2 1938480 1938570 -251318013 + GA-rich Low_complexity Low_complexity 3 91 0 396 0 0 0 chr2 1939388 1939432 -251317151 + (TG)n Simple_repeat Simple_repeat 1 44 0 2007 104 54 17 chr2 1941157 1941455 -251315128 - AluY SINE Alu -2 309 1 406 311 67 16 chr2 1942384 1942577 -251314006 - MIR SINE MIR -51 211 9 558 238 41 74 chr2 1942595 1942960 -251313623 - L1MC5 LINE L1 -35 7926 7574 239 253 13 0 chr2 1943565 1943644 -251312939 + GA-rich Low_complexity Low_complexity 1 80 0 544 161 8 15 chr2 1943667 1943797 -251312786 + GA-rich Low_complexity Low_complexity 4 132 0 292 264 56 16 chr2 1944718 1944843 -251311740 + MIR SINE MIR 89 218 -44 249 282 84 0 chr2 1945035 1945106 -251311477 - MIR3 SINE MIR -37 171 95 2314 113 50 14 chr2 1945186 1945548 -251311035 + THE1C LTR MaLR 1 375 0 309 350 122 0 chr2 1945928 1946108 -251310475 + L3 LINE CR1 1284 1485 -92 209 310 11 23 chr2 1946377 1946464 -251310119 + L2 LINE L2 3227 3312 -1 313 308 58 24 chr2 1946724 1946932 -251309651 + L1ME LINE L1 5590 5804 -317 2024 135 0 0 chr2 1946978 1947260 -251309323 + AluSx SINE Alu 1 282 -30 26 30 0 0 chr2 1947456 1947489 -251309094 + AT_rich Low_complexity Low_complexity 1 33 0 218 213 82 0 chr2 1948058 1948119 -251308464 + MIR SINE MIR 107 172 -90 2016 98 10 49 chr2 1948895 1949201 -251307382 - AluSc SINE Alu -15 294 1 2126 133 0 3 chr2 1950159 1950467 -251306116 - AluSg SINE Alu -3 307 1 234 116 0 0 chr2 1951132 1951175 -251305408 + (CA)n Simple_repeat Simple_repeat 2 44 0 1934 80 8 0 chr2 1951202 1951451 -251305132 + AluSp SINE Alu 43 293 -20 255 243 0 43 chr2 1951782 1951852 -251304731 + MIR3 SINE MIR 126 192 -16 406 315 118 0 chr2 1952313 1952516 -251304067 - MIR SINE MIR -28 234 8 794 192 83 33 chr2 1952680 1952920 -251303663 + Charlie5 DNA MER1_type 2334 2585 -27 449 253 59 24 chr2 1954871 1955041 -251301542 + MER5B DNA MER1_type 3 178 0 247 271 52 84 chr2 1959152 1959307 -251297276 + L3 LINE CR1 1426 1575 -2 978 107 0 0 chr2 1959713 1959890 -251296693 + (GA)n Simple_repeat Simple_repeat 2 178 0 637 159 0 12 chr2 1959891 1960061 -251296522 + GA-rich Low_complexity Low_complexity 2 169 0 236 240 10 0 chr2 1960077 1960177 -251296406 + GA-rich Low_complexity Low_complexity 2 102 0 2323 97 0 3 chr2 1963029 1963337 -251293246 - AluSc SINE Alu -2 307 1 218 266 16 0 chr2 1965379 1965461 -251291122 + (TCTCTG)n Simple_repeat Simple_repeat 1 83 0 185 304 38 0 chr2 1965592 1965671 -251290912 - L2 LINE L2 -7 3306 3225 21 0 0 0 chr2 1965711 1965732 -251290851 + AT_rich Low_complexity Low_complexity 1 21 0 1860 144 29 13 chr2 1965733 1966039 -251290544 + AluJo SINE Alu 1 311 -1 451 248 57 0 chr2 1968853 1968958 -251287625 - MER58A DNA MER1_type 0 114 4 711 173 74 20 chr2 1969078 1969280 -251287303 + MER33 DNA MER1_type 21 233 -91 1758 148 184 11 chr2 1969754 1970119 -251286464 - MSTA LTR MaLR 0 428 1 313 226 22 50 chr2 1972122 1972303 -251284280 + (CACTA)n Simple_repeat Simple_repeat 4 179 0 215 277 0 58 chr2 1972279 1972467 -251284116 + (CACTC)n Simple_repeat Simple_repeat 2 178 0 * 240 284 0 62 chr2 1972376 1972552 -251284031 + (CACTT)n Simple_repeat Simple_repeat 3 167 0 * 302 224 18 64 chr2 1972435 1973012 -251283571 + (CACTA)n Simple_repeat Simple_repeat 1 550 0 215 283 6 50 chr2 1973265 1973424 -251283159 + (CACTC)n Simple_repeat Simple_repeat 2 153 0 279 227 0 57 chr2 1973424 1973600 -251282983 + (CTATA)n Simple_repeat Simple_repeat 1 166 0 329 230 0 73 chr2 1973694 1973885 -251282698 + (CTACT)n Simple_repeat Simple_repeat 3 179 0 276 245 0 58 chr2 1974025 1974213 -251282370 + (CTATA)n Simple_repeat Simple_repeat 1 177 0 205 274 0 60 chr2 1974274 1974442 -251282141 + (CTTTA)n Simple_repeat Simple_repeat 5 162 0 394 218 0 52 chr2 1974494 1974668 -251281915 + (CACTA)n Simple_repeat Simple_repeat 3 167 0 1722 167 0 7 chr2 1976514 1976789 -251279794 + AluJb SINE Alu 1 273 -39 180 0 0 0 chr2 1978737 1978757 -251277826 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 1053 117 0 0 chr2 1978757 1978902 -251277681 - L1PA10 LINE L1 -19 6149 6005 2101 131 0 0 chr2 1978902 1979237 -251277346 + L1P LINE L1 4681 5015 -1131 2077 133 0 22 chr2 1980986 1981302 -251275281 - AluY SINE Alu -2 309 1 26 74 0 0 chr2 1981775 1981829 -251274754 + AT_rich Low_complexity Low_complexity 1 54 0 192 77 0 0 chr2 1983938 1983964 -251272619 + (TA)n Simple_repeat Simple_repeat 2 27 0 277 301 18 9 chr2 1991052 1991165 -251265418 + GA-rich Low_complexity Low_complexity 1 114 0 24 0 0 0 chr2 1992006 1992030 -251264553 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr2 1992505 1992527 -251264056 + AT_rich Low_complexity Low_complexity 1 22 0 324 0 0 0 chr2 1995895 1995931 -251260652 + (CA)n Simple_repeat Simple_repeat 2 37 0 302 138 17 0 chr2 1996448 1996506 -251260077 + (TG)n Simple_repeat Simple_repeat 2 60 0 195 42 0 0 chr2 1997407 1997431 -251259152 + (TC)n Simple_repeat Simple_repeat 2 25 0 225 0 0 0 chr2 1997433 1997458 -251259125 + (CA)n Simple_repeat Simple_repeat 1 25 0 226 244 0 0 chr2 1997906 1997951 -251258632 + (CATATA)n Simple_repeat Simple_repeat 4 48 0 192 97 0 0 chr2 1998842 1998873 -251257710 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1501 153 91 28 chr2 1999977 2000264 -251256319 + MER1B DNA MER1_type 35 339 0 26 0 0 0 chr2 2000624 2000650 -251255933 + AT_rich Low_complexity Low_complexity 1 26 0 248 375 0 0 chr2 2001002 2001090 -251255493 + LTR67 LTR ERVL 108 195 -362 753 209 0 0 chr2 2001977 2002111 -251254472 + FRAM SINE Alu 1 129 -47 3477 20 0 0 chr2 2002112 2002514 -251254069 + L1PA4 LINE L1 5752 6153 -2 552 63 13 0 chr2 2002593 2002672 -251253911 - L1PA4 LINE L1 -3 6152 6073 281 258 50 17 chr2 2004155 2004275 -251252308 + LTR67 LTR ERVL 434 557 0 306 256 202 8 chr2 2004878 2005007 -251251576 + MER5A DNA MER1_type 36 189 0 607 225 144 32 chr2 2005015 2005178 -251251405 - MER33 DNA MER1_type -2261 324 181 2209 104 3 0 chr2 2005178 2005475 -251251108 - AluSp SINE Alu -15 298 1 2118 122 3 0 chr2 2005475 2005763 -251250820 - AluSg SINE Alu -21 289 1 607 225 144 32 chr2 2005763 2005882 -251250701 - MER33 DNA MER1_type -2403 182 9 296 245 157 20 chr2 2006855 2006957 -251249626 - MIR3 SINE MIR -6 202 87 340 173 0 19 chr2 2006962 2007066 -251249517 + GA-rich Low_complexity Low_complexity 1 102 0 548 295 50 42 chr2 2009184 2009425 -251247158 + MIR SINE MIR 12 254 -8 1331 230 65 68 chr2 2010140 2010858 -251245725 - L1MC5 LINE L1 -697 7264 6542 2057 134 90 3 chr2 2010875 2011210 -251245373 - THE1B LTR MaLR 0 364 1 306 73 0 0 chr2 2012069 2012110 -251244473 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 22 0 0 0 chr2 2013005 2013027 -251243556 + AT_rich Low_complexity Low_complexity 1 22 0 36 53 0 0 chr2 2013217 2013274 -251243309 + AT_rich Low_complexity Low_complexity 1 57 0 342 309 26 26 chr2 2015199 2015351 -251241232 - MIR SINE MIR 0 262 111 1740 80 16 0 chr2 2015373 2015723 -251240860 - L1P3 LINE L1 -634 5520 5167 823 30 20 0 chr2 2015725 2015826 -251240757 + L1PA7 LINE L1 6050 6152 -2 25 31 0 0 chr2 2016046 2016078 -251240505 + AT_rich Low_complexity Low_complexity 1 32 0 1049 99 43 0 chr2 2016228 2016369 -251240214 + AluSg/x SINE Alu 154 300 -12 776 256 94 3 chr2 2016912 2017221 -251239362 + L1MD3 LINE L1 7659 7995 0 641 76 11 0 chr2 2017434 2017526 -251239057 + (TTTC)n Simple_repeat Simple_repeat 4 96 0 28 29 0 0 chr2 2017561 2017596 -251238987 + AT_rich Low_complexity Low_complexity 1 35 0 1964 222 0 22 chr2 2018223 2018722 -251237861 + L1PB4 LINE L1 2226 2713 -3433 200 59 29 0 chr2 2018737 2018771 -251237812 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 1198 67 6 0 chr2 2018776 2018941 -251237642 - L1PA8A LINE L1 -28 6103 5938 10215 193 29 21 chr2 2018944 2022304 -251234279 + L1PB4 LINE L1 2703 6090 -66 273 172 0 0 chr2 2022356 2022414 -251234169 + L1PB4 LINE L1 6097 6154 -2 256 219 14 14 chr2 2022824 2022897 -251233686 - MLT2E LTR ERVL -525 103 31 616 277 27 31 chr2 2023593 2023817 -251232766 - MIR SINE MIR 0 262 40 3298 183 110 97 chr2 2023941 2024468 -251232115 - L1MC3 LINE L1 -60 7725 7206 248 220 30 40 chr2 2024468 2024568 -251232015 - MLT1F1 LTR MaLR -445 122 24 3298 183 110 97 chr2 2024568 2024608 -251231975 - L1MC3 LINE L1 -579 7206 7168 834 247 70 78 chr2 2024608 2025005 -251231578 + MSTD LTR MaLR 1 394 -2 3298 183 110 97 chr2 2025005 2025576 -251231007 - L1MC3 LINE L1 -617 7168 6499 1669 98 0 9 chr2 2026358 2026582 -251230001 - L1PA8 LINE L1 0 6172 5951 923 279 153 28 chr2 2027163 2027869 -251228714 + HAL1 LINE L1 841 1634 -873 239 0 32 0 chr2 2027873 2027904 -251228679 + (TAGA)n Simple_repeat Simple_repeat 4 35 0 234 253 157 12 chr2 2028031 2028114 -251228469 + MLT1L LTR MaLR 196 290 -325 1060 308 107 36 chr2 2028359 2029164 -251227419 + HAL1 LINE L1 1646 2507 0 291 311 133 0 chr2 2029627 2029778 -251226805 - MLT1E2 LTR MaLR -144 482 312 628 261 39 93 chr2 2031397 2031753 -251224830 - MER46C DNA MER2_type 0 338 2 240 111 0 0 chr2 2031870 2031906 -251224677 + (CA)n Simple_repeat Simple_repeat 1 36 0 291 122 0 0 chr2 2033088 2033137 -251223446 + (TC)n Simple_repeat Simple_repeat 1 49 0 3152 178 85 15 chr2 2033451 2033685 -251222898 - L1MC1 LINE L1 0 6333 6117 2760 91 31 0 chr2 2033685 2034038 -251222545 + THE1B LTR MaLR 1 364 0 3152 178 85 15 chr2 2034038 2034473 -251222110 - L1MC1 LINE L1 -216 6117 5634 17556 83 4 12 chr2 2035044 2036989 -251219594 - L1PA7 LINE L1 -2 6152 4250 1714 81 0 136 chr2 2036989 2037299 -251219284 - AluY SINE Alu 0 311 44 17556 83 4 12 chr2 2037299 2038451 -251218132 - L1PA7 LINE L1 -1904 4250 3090 16932 123 14 21 chr2 2038451 2041196 -251215387 - L1P LINE L1 -2823 3323 598 371 329 71 19 chr2 2041480 2041690 -251214893 - MIR SINE MIR -1 261 41 221 325 0 24 chr2 2041948 2042019 -251214564 + L2 LINE L2 2323 2391 -923 319 241 44 95 chr2 2042019 2042177 -251214406 + MER5A DNA MER1_type 1 150 -39 274 313 141 50 chr2 2042202 2042620 -251213963 + L2 LINE L2 2397 2852 -462 188 310 31 78 chr2 2042802 2042931 -251213652 + MIR SINE MIR 65 187 -75 590 203 20 43 chr2 2043044 2043197 -251213386 + THE1C LTR MaLR 1 154 -262 9926 120 52 6 chr2 2043197 2044667 -251211916 + THE1C-int LTR MaLR 42 1579 -1 1838 144 88 31 chr2 2044670 2045023 -251211560 + THE1C LTR MaLR 3 375 0 828 290 90 24 chr2 2045920 2046599 -251209984 + L1M4 LINE L1 2972 3695 -2451 2155 169 40 33 chr2 2046741 2047287 -251209296 + MLT2A2 LTR ERVL 2 554 0 331 263 70 18 chr2 2047475 2047589 -251208994 + HAL1 LINE L1 22 141 -2366 388 302 35 12 chr2 2047770 2047942 -251208641 + HAL1 LINE L1 157 332 -2175 923 302 46 62 chr2 2047944 2048726 -251207857 + L2 LINE L2 2538 3310 -3 639 183 48 22 chr2 2048876 2049015 -251207568 - MLT1E1 LTR MaLR -6 637 406 653 360 115 10 chr2 2049061 2049555 -251207028 - L2 LINE L2 -482 2832 2287 231 337 123 16 chr2 2050340 2050527 -251206056 + L2 LINE L2 1876 2082 -1232 2136 89 13 23 chr2 2050580 2050905 -251205678 - AluY SINE Alu 0 322 1 1013 283 84 79 chr2 2051250 2051479 -251205104 + L2 LINE L2 2287 2514 -799 3401 66 0 0 chr2 2051479 2051887 -251204696 - L1PA8 LINE L1 0 6172 5765 1013 283 84 79 chr2 2051887 2052332 -251204251 + L2 LINE L2 2514 2956 -357 2568 156 46 2 chr2 2052332 2052742 -251203841 - MSTA LTR MaLR 0 428 1 6805 191 84 44 chr2 2052742 2054259 -251202324 - MSTA-int LTR MaLR 0 1580 3 2723 110 34 53 chr2 2054261 2054641 -251201942 - MSTA LTR MaLR 0 428 55 2257 95 0 46 chr2 2054641 2054966 -251201617 - AluSg SINE Alu 0 310 1 2723 110 34 53 chr2 2054966 2055021 -251201562 - MSTA LTR MaLR -373 55 1 1013 283 84 79 chr2 2055021 2055344 -251201239 + L2 LINE L2 2956 3313 0 374 320 39 20 chr2 2055671 2055824 -251200759 + MIR3 SINE MIR 27 182 -26 280 300 125 31 chr2 2056840 2057000 -251199583 - L2 LINE L2 0 3272 3098 257 122 0 0 chr2 2057166 2057207 -251199376 + AluSx SINE Alu 1 41 -259 2045 118 0 0 chr2 2057207 2057479 -251199104 + AluSx SINE Alu 19 290 -22 2233 81 0 0 chr2 2057486 2057809 -251198774 + AluY SINE Alu 9 331 0 1606 150 4 33 chr2 2058436 2058710 -251197873 + AluJo SINE Alu 38 303 -9 1185 209 41 55 chr2 2058742 2059103 -251197480 + MSTB2 LTR MaLR 41 457 0 236 333 0 0 chr2 2060648 2060714 -251195869 - L1MCc LINE L1 -3407 3534 3469 1407 208 19 55 chr2 2060745 2061130 -251195453 - MLT1A2 LTR MaLR -2 465 1 1216 253 65 46 chr2 2061228 2061950 -251194633 - L1MCc LINE L1 -4891 1532 1184 2306 108 0 0 chr2 2062024 2062320 -251194263 - AluSx SINE Alu -16 296 1 250 325 75 12 chr2 2062358 2062651 -251193932 + L1P LINE L1 4092 4408 -1738 22 0 0 0 chr2 2064423 2064445 -251192138 + AT_rich Low_complexity Low_complexity 1 22 0 2424 106 140 11 chr2 2066195 2066574 -251190009 - MSTA LTR MaLR 0 428 1 242 337 99 51 chr2 2066592 2067458 -251189125 + L2 LINE L2 1976 2883 -431 232 274 129 48 chr2 2067587 2067711 -251188872 + L2 LINE L2 3139 3272 0 757 300 64 54 chr2 2067749 2068172 -251188411 - L2 LINE L2 -2 3311 2885 305 289 33 0 chr2 2068474 2068595 -251187988 + L1ME4a LINE L1 5769 5893 -228 412 332 88 45 chr2 2069521 2070009 -251186574 + HAL1 LINE L1 597 1105 -1402 504 304 175 31 chr2 2070080 2070687 -251185896 + HAL1 LINE L1 1450 2193 -314 1689 193 116 30 chr2 2070687 2071117 -251185466 + MLT1C LTR MaLR 1 467 0 504 304 175 31 chr2 2071117 2071279 -251185304 + HAL1 LINE L1 2193 2330 -177 346 285 39 31 chr2 2071385 2071515 -251185068 - MIR SINE MIR -34 228 98 1242 151 130 50 chr2 2071519 2071818 -251184765 - L1MA6 LINE L1 -366 5934 5612 199 317 17 0 chr2 2071818 2071878 -251184705 - MIR SINE MIR -188 74 14 180 179 0 0 chr2 2072042 2072081 -251184502 + (TG)n Simple_repeat Simple_repeat 1 39 0 264 122 0 0 chr2 2072133 2072174 -251184409 - MADE1 DNA Mariner -39 41 1 966 288 137 24 chr2 2072222 2072805 -251183778 + L1ME3A LINE L1 5522 6170 0 1302 155 132 78 chr2 2072879 2073175 -251183408 + AluJb SINE Alu 1 312 0 2080 106 3 56 chr2 2073758 2074079 -251182504 + AluSg SINE Alu 1 304 -6 282 343 10 0 chr2 2074537 2074639 -251181944 - L1MCc LINE L1 -5984 439 337 2141 125 3 3 chr2 2076760 2077071 -251179512 - AluJo SINE Alu -1 311 1 180 289 105 13 chr2 2077277 2077353 -251179230 + L2 LINE L2 3200 3282 -31 2487 59 0 3 chr2 2077378 2077681 -251178902 + AluSq SINE Alu 1 302 -11 1782 73 4 9 chr2 2077683 2077916 -251178667 + AluSg SINE Alu 1 232 -78 263 119 24 0 chr2 2078016 2078058 -251178525 - AluJ/FLAM SINE Alu -239 63 21 2288 121 0 0 chr2 2078223 2078521 -251178062 + AluSq SINE Alu 1 298 -15 438 262 32 40 chr2 2079222 2079348 -251177235 - MIR3 SINE MIR -70 138 14 367 20 0 0 chr2 2079981 2080030 -251176553 - AluY SINE Alu 0 300 252 1145 66 66 0 chr2 2080030 2080182 -251176401 - AluSg/x SINE Alu -20 290 129 2342 102 0 10 chr2 2080191 2080505 -251176078 - AluSx SINE Alu -1 311 1 254 167 27 59 chr2 2080606 2080722 -251175861 + MSR1 Satellite Satellite 1 112 -25 1446 46 0 23 chr2 2080829 2081003 -251175580 - AluY SINE Alu -141 170 1 236 232 18 0 chr2 2081007 2081063 -251175520 + MER3 DNA MER1_type 153 209 0 260 277 127 41 chr2 2081075 2081295 -251175288 - L2 LINE L2 -1177 2137 1899 200 262 131 0 chr2 2081459 2081520 -251175063 - MIR SINE MIR -61 147 79 291 230 0 52 chr2 2081617 2081791 -251174792 + (CCCCAG)n Simple_repeat Simple_repeat 1 165 0 314 223 0 51 chr2 2081807 2081982 -251174601 + (CCCCAG)n Simple_repeat Simple_repeat 1 166 0 299 236 0 52 chr2 2082035 2082209 -251174374 + (CCCCAG)n Simple_repeat Simple_repeat 1 165 0 198 347 53 32 chr2 2083885 2083980 -251172603 + L2 LINE L2 3200 3296 -17 23 62 0 0 chr2 2086390 2086422 -251170161 + GC_rich Low_complexity Low_complexity 1 32 0 543 83 0 0 chr2 2086586 2086658 -251169925 + Alu SINE Alu 230 301 -9 355 282 105 24 chr2 2086660 2086784 -251169799 - MIR SINE MIR -21 241 108 244 272 71 71 chr2 2087082 2087251 -251169332 + L2 LINE L2 2938 3106 -166 285 98 0 0 chr2 2088908 2088949 -251167634 + (CA)n Simple_repeat Simple_repeat 2 42 0 1586 129 113 4 chr2 2089349 2089440 -251167143 + AluSx SINE Alu 25 105 -207 2143 93 7 0 chr2 2089440 2089751 -251166832 + AluSg SINE Alu 1 313 0 1586 129 113 4 chr2 2089751 2089914 -251166669 + AluSx SINE Alu 105 308 -4 1041 185 158 68 chr2 2089916 2090050 -251166533 + AluJo SINE Alu 1 121 -181 2237 115 3 3 chr2 2090050 2090346 -251166237 + AluSg SINE Alu 1 296 -14 1041 185 158 68 chr2 2090346 2090476 -251166107 + AluJo SINE Alu 121 289 -13 551 197 63 0 chr2 2091047 2091174 -251165409 - Charlie1 DNA MER1_type 0 2761 2627 546 237 103 5 chr2 2091176 2091370 -251165213 - Charlie1 DNA MER1_type -2547 214 2 194 270 95 14 chr2 2092367 2092441 -251164142 - MIR SINE MIR -72 190 111 762 218 98 10 chr2 2092810 2093003 -251163580 - MIR SINE MIR -23 239 30 412 279 165 32 chr2 2093048 2093417 -251163166 - L2 LINE L2 -7 3265 2848 1174 59 0 0 chr2 2093797 2093932 -251162651 + AluSq/x SINE Alu 1 135 -178 1745 134 59 66 chr2 2093932 2094237 -251162346 + AluSx SINE Alu 1 303 -9 2238 91 18 0 chr2 2094239 2094524 -251162059 + AluSq SINE Alu 2 291 -22 1399 138 153 15 chr2 2094543 2094804 -251161779 + AluJo SINE Alu 1 297 -15 345 275 22 11 chr2 2094804 2094895 -251161688 + MIR SINE MIR 59 150 -112 2029 156 0 0 chr2 2095041 2095329 -251161254 + AluJb SINE Alu 1 288 -24 525 238 79 114 chr2 2095442 2095732 -251160851 - L1ME LINE L1 -380 5790 5511 1605 187 74 19 chr2 2095759 2096122 -251160461 - MSTB1 LTR MaLR -6 426 44 3033 56 0 0 chr2 2096122 2096495 -251160088 - L1PA7 LINE L1 0 6154 5782 2705 48 0 0 chr2 2098336 2098647 -251157936 - AluY SINE Alu 0 311 1 236 330 50 0 chr2 2098991 2099091 -251157492 + L2 LINE L2 3202 3306 -7 1245 314 66 76 chr2 2100902 2101475 -251155108 - L1M4 LINE L1 -2053 4093 3533 228 111 0 0 chr2 2101475 2101511 -251155072 + (ATG)n Simple_repeat Simple_repeat 2 37 0 1245 314 66 76 chr2 2101511 2101908 -251154675 - L1M4 LINE L1 -2613 3533 3133 22 56 0 0 chr2 2102167 2102203 -251154380 + AT_rich Low_complexity Low_complexity 1 36 0 989 248 13 9 chr2 2102296 2102614 -251153969 + L1 LINE L1 4304 4622 -1524 216 342 13 0 chr2 2102726 2102805 -251153778 + MIR SINE MIR 164 243 -19 22 0 0 0 chr2 2102939 2102961 -251153622 + AT_rich Low_complexity Low_complexity 1 22 0 645 227 51 60 chr2 2103760 2103976 -251152607 + MER20 DNA MER1_type 4 217 -2 305 302 65 51 chr2 2105281 2105556 -251151027 + HERVL LTR ERVL 5002 5280 -374 511 293 70 64 chr2 2106238 2106566 -251150017 + L1MC/D LINE L1 4039 4368 -1778 234 304 177 6 chr2 2106576 2106734 -251149849 - LTR33 LTR ERVL -8 513 329 448 363 46 31 chr2 2107115 2107440 -251149143 + L1MC/D LINE L1 4507 4836 -1310 708 269 48 35 chr2 2107527 2107754 -251148829 - MIR SINE MIR -7 255 26 25 65 0 0 chr2 2107820 2107866 -251148717 + AT_rich Low_complexity Low_complexity 1 46 0 444 272 32 13 chr2 2108075 2108233 -251148350 + L1MC/D LINE L1 5315 5475 -2333 590 281 45 45 chr2 2108349 2108570 -251148013 + L2 LINE L2 2650 2870 -444 645 245 119 42 chr2 2108598 2108884 -251147699 - L1ME3A LINE L1 -18 6152 5845 1285 203 33 46 chr2 2109488 2109794 -251146789 + AluJo SINE Alu 1 302 0 5216 30 0 2 chr2 2110188 2110794 -251145789 - L1PA4 LINE L1 -1 6154 5550 1314 111 11 69 chr2 2110904 2111166 -251145417 - L1MA9 LINE L1 0 6312 6066 22 0 0 0 chr2 2111536 2111558 -251145025 + AT_rich Low_complexity Low_complexity 1 22 0 248 330 37 9 chr2 2111711 2111820 -251144763 + MIR SINE MIR 51 162 -100 4416 227 64 25 chr2 2111824 2112047 -251144536 + L1MB8 LINE L1 3722 3935 -2249 207 0 0 0 chr2 2112047 2112070 -251144513 + (TAA)n Simple_repeat Simple_repeat 1 23 0 4416 227 64 25 chr2 2112070 2113348 -251143235 + L1MB8 LINE L1 3935 5323 -861 1979 123 87 98 chr2 2113348 2113786 -251142797 - Tigger2a DNA MER2_type -1 433 1 4416 227 64 25 chr2 2113786 2114269 -251142314 + L1MB8 LINE L1 5323 5786 -398 364 237 34 17 chr2 2114389 2114507 -251142076 + L1MB8 LINE L1 6039 6158 -20 1520 240 9 3 chr2 2114507 2114857 -251141726 + MLT1A1 LTR MaLR 1 352 -13 19047 167 30 15 chr2 2114993 2115370 -251141213 - L1 LINE L1 -3789 3776 3406 189 94 0 0 chr2 2115370 2115402 -251141181 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 19047 167 30 15 chr2 2115402 2116418 -251140165 - L1 LINE L1 -4159 3406 2407 2033 116 25 3 chr2 2116418 2116702 -251139881 + AluSq SINE Alu 1 290 -23 19047 167 30 15 chr2 2116702 2118210 -251138373 - L1 LINE L1 -5158 2407 804 1533 127 19 0 chr2 2118210 2118423 -251138160 + AluSp SINE Alu 89 305 -8 19047 167 30 15 chr2 2118423 2119228 -251137355 - L1 LINE L1 -6761 804 13 673 334 59 100 chr2 2119229 2120038 -251136545 + L1ME3A LINE L1 5394 6169 -1 1107 304 127 22 chr2 2120325 2121111 -251135472 - L2 LINE L2 -665 2649 1781 211 213 21 0 chr2 2121138 2121185 -251135398 + L2 LINE L2 3266 3313 0 1239 175 0 0 chr2 2121880 2122086 -251134497 - AluJb SINE Alu -1 311 106 719 317 98 31 chr2 2122096 2122511 -251134072 + L1ME LINE L1 3369 3808 -2338 37 81 0 0 chr2 2122518 2122604 -251133979 + AT_rich Low_complexity Low_complexity 1 86 0 404 212 16 43 chr2 2122782 2122966 -251133617 + (TA)n Simple_repeat Simple_repeat 2 180 0 1684 270 97 46 chr2 2123061 2123574 -251133009 + L1ME LINE L1 3948 4433 -1713 2255 111 45 31 chr2 2123574 2123933 -251132650 - THE1B LTR MaLR 0 364 1 1684 270 97 46 chr2 2123933 2124780 -251131803 + L1ME LINE L1 4433 5378 -768 424 269 0 17 chr2 2125194 2125313 -251131270 + L1ME LINE L1 5643 5759 -411 824 257 117 18 chr2 2125534 2125876 -251130707 + L1ME LINE L1 5410 5785 -385 308 206 118 20 chr2 2126205 2126307 -251130276 - HAL1 LINE L1 -1423 1084 973 1361 31 12 0 chr2 2126891 2127053 -251129530 + L1PA5 LINE L1 5984 6147 -7 234 62 0 0 chr2 2127656 2127688 -251128895 + (TG)n Simple_repeat Simple_repeat 1 32 0 183 42 0 0 chr2 2127935 2127959 -251128624 + (TTTTTA)n Simple_repeat Simple_repeat 4 27 0 2136 118 0 17 chr2 2128310 2128671 -251127912 + AluSx SINE Alu 1 356 0 1414 214 67 38 chr2 2128805 2129254 -251127329 - MLT1C LTR MaLR -2 465 4 193 320 13 27 chr2 2129859 2129934 -251126649 - L2 LINE L2 -6 3307 3234 392 322 107 53 chr2 2130334 2131027 -251125556 - L1M4 LINE L1 -3218 2928 2199 3859 189 23 51 chr2 2131731 2132604 -251123979 + L1MA9 LINE L1 4940 5771 -541 270 0 0 0 chr2 2132604 2132634 -251123949 + (CA)n Simple_repeat Simple_repeat 1 30 0 3859 189 23 51 chr2 2132634 2133125 -251123458 + L1MA9 LINE L1 5771 6274 -38 328 289 62 57 chr2 2133499 2133869 -251122714 + LTR16A LTR ERVL 74 445 -5 545 320 42 14 chr2 2133875 2134159 -251122424 + HERV16 LTR ERVL 2 293 -4703 875 212 45 37 chr2 2134294 2134563 -251122020 - MLT1D LTR MaLR 0 505 235 502 324 52 0 chr2 2134730 2134943 -251121640 + HERV16 LTR ERVL 457 680 -4316 1532 312 64 18 chr2 2135047 2136318 -251120265 + HERV16 LTR ERVL 869 2293 -3072 396 0 0 0 chr2 2136318 2136362 -251120221 + (TA)n Simple_repeat Simple_repeat 2 45 0 1532 312 64 18 chr2 2136362 2136537 -251120046 + HERV16 LTR ERVL 2293 2458 -2907 566 142 9 9 chr2 2136637 2136743 -251119840 - MSTC LTR MaLR 0 428 323 12046 107 5 1 chr2 2136852 2138632 -251117951 - L1P3 LINE L1 -4676 1775 7 321 152 61 15 chr2 2138632 2138698 -251117885 - MSTB2 LTR MaLR -388 69 1 4025 210 50 1 chr2 2139790 2140770 -251115813 + L1MCa LINE L1 139 1166 -5260 3419 221 24 46 chr2 2140773 2141352 -251115231 + L1MB8 LINE L1 4599 5189 -989 306 24 0 0 chr2 2141352 2141393 -251115190 + L1PA4 LINE L1 6112 6152 -3 3419 221 24 46 chr2 2141393 2142330 -251114253 + L1MB8 LINE L1 5189 6011 -167 2210 78 0 0 chr2 2142330 2142598 -251113985 + AluY SINE Alu 29 296 -15 3419 221 24 46 chr2 2142598 2142748 -251113835 + L1MB8 LINE L1 6011 6163 -15 301 281 97 52 chr2 2143538 2143805 -251112778 - L2 LINE L2 -13 3300 3022 28 0 0 0 chr2 2144569 2144597 -251111986 + AT_rich Low_complexity Low_complexity 1 28 0 4778 0 81 0 chr2 2145686 2145929 -251110654 + L1MC2 LINE L1 5106 5325 -1019 4778 131 46 7 chr2 2145929 2146771 -251109812 + L1MC2 LINE L1 5461 6335 -9 4778 0 81 0 chr2 2146771 2146806 -251109777 + L1MC2 LINE L1 5325 6335 -9 343 278 120 1 chr2 2148450 2148609 -251107974 + HERV16 LTR ERVL 2972 3129 -2525 877 325 64 51 chr2 2149132 2150050 -251106533 + ERVL LTR ERVL 4474 5403 -361 253 284 0 0 chr2 2150056 2150130 -251106453 + L1MC4 LINE L1 6628 6701 -1341 252 271 38 128 chr2 2151114 2151247 -251105336 + L2 LINE L2 3150 3270 -2 213 305 118 37 chr2 2151244 2151431 -251105152 + L2 LINE L2 2183 2384 -930 * 279 321 81 48 chr2 2151904 2152379 -251104204 + L2 LINE L2 2593 3084 -188 271 313 45 36 chr2 2153742 2153854 -251102729 - L2 LINE L2 -19 3253 3141 302 308 0 0 chr2 2154118 2154222 -251102361 + (CA)n Simple_repeat Simple_repeat 1 104 0 196 324 28 19 chr2 2154655 2154763 -251101820 - L2 LINE L2 -1 3312 3204 254 339 84 46 chr2 2154883 2155506 -251101077 - L2 LINE L2 -185 3087 2444 388 292 41 19 chr2 2155511 2155762 -251100821 + L1ME4a LINE L1 5329 5582 -580 243 258 34 45 chr2 2156025 2156114 -251100469 + L2 LINE L2 3172 3259 -54 198 71 0 0 chr2 2156132 2156160 -251100423 + (TGAA)n Simple_repeat Simple_repeat 2 29 0 188 358 83 46 chr2 2157045 2157154 -251099429 - L2 LINE L2 -18 3254 3142 2419 116 28 0 chr2 2157397 2157751 -251098832 + THE1B LTR MaLR 1 364 0 271 293 123 0 chr2 2159949 2160055 -251096528 + L2 LINE L2 3185 3303 -10 1335 162 33 114 chr2 2160418 2160752 -251095831 - AluYb8 SINE Alu -9 309 3 725 178 7 0 chr2 2162606 2162741 -251093842 + L1PB4 LINE L1 6013 6148 -8 3202 257 81 36 chr2 2162785 2163351 -251093232 - L1ME LINE L1 -458 5642 5103 2255 127 0 0 chr2 2163351 2163659 -251092924 - AluSg SINE Alu -2 308 1 3202 257 81 36 chr2 2163659 2165383 -251091200 - L1ME LINE L1 -997 5103 3237 266 214 0 0 chr2 2165579 2165635 -251090948 - MER58 DNA MER1_type -100 115 60 546 261 67 78 chr2 2165750 2166121 -251090462 - L1ME LINE L1 -4202 2059 1693 26 98 0 0 chr2 2166126 2166208 -251090375 + AT_rich Low_complexity Low_complexity 1 82 0 934 289 82 50 chr2 2166299 2167436 -251089147 - L1ME LINE L1 -4649 1433 378 228 135 0 0 chr2 2167706 2167743 -251088840 + (T)n Simple_repeat Simple_repeat 1 37 0 350 324 7 35 chr2 2168302 2168444 -251088139 - MER5A DNA MER1_type -22 167 30 300 337 141 9 chr2 2168510 2168851 -251087732 + L1ME4a LINE L1 5606 5991 -130 288 247 74 0 chr2 2169940 2170021 -251086562 - L2 LINE L2 -7 3306 3220 333 0 0 0 chr2 2171187 2171224 -251085359 + (TG)n Simple_repeat Simple_repeat 1 37 0 2194 114 0 7 chr2 2171872 2172178 -251084405 - AluSx SINE Alu -8 304 1 934 281 70 24 chr2 2172612 2173071 -251083512 - L1ME3A LINE L1 -5 6165 5686 987 293 100 21 chr2 2173083 2174108 -251082475 - L1ME3A LINE L1 -595 5575 4632 2140 120 0 10 chr2 2174108 2174120 -251082463 - AluSx SINE Alu -14 298 287 229 67 0 0 chr2 2174120 2174150 -251082433 + (TTTA)n Simple_repeat Simple_repeat 2 144 0 2140 120 0 10 chr2 2174150 2174438 -251082145 - AluSx SINE Alu -25 287 1 3222 165 16 40 chr2 2174447 2175113 -251081470 - L1MA8 LINE L1 -17 6274 5625 987 293 100 21 chr2 2175113 2175251 -251081332 - L1ME3A LINE L1 -1545 4625 4316 782 134 9 0 chr2 2176257 2176369 -251080214 - THE1B LTR MaLR -188 176 64 2640 107 3 0 chr2 2177211 2177574 -251079009 - THE1B LTR MaLR 0 364 1 197 286 29 14 chr2 2178475 2178545 -251078038 + MIR SINE MIR 21 91 -117 232 325 70 38 chr2 2178799 2178956 -251077627 + MIR SINE MIR 82 243 -19 324 264 8 32 chr2 2179088 2179213 -251077370 + (TATATG)n Simple_repeat Simple_repeat 4 125 0 1292 200 50 126 chr2 2179573 2179834 -251076749 + MLT2B1 LTR ERVL 1 280 -134 239 0 0 31 chr2 2179834 2179866 -251076717 + (TTTTC)n Simple_repeat Simple_repeat 2 32 0 1292 200 50 126 chr2 2179866 2179957 -251076626 + MLT2B1 LTR ERVL 280 192 -222 518 15 0 29 chr2 2179957 2180025 -251076558 + (TTTTC)n Simple_repeat Simple_repeat 2 67 0 1292 200 50 126 chr2 2180025 2180230 -251076353 + MLT2B1 LTR ERVL 191 410 -4 23 0 0 29 chr2 2180697 2180717 -251075866 + AT_rich Low_complexity Low_complexity 1 21 -12 1768 155 0 0 chr2 2180717 2181001 -251075582 - AluSg SINE Alu -26 284 1 23 0 0 29 chr2 2181001 2181014 -251075569 + AT_rich Low_complexity Low_complexity 21 33 0 207 69 0 0 chr2 2181845 2181874 -251074709 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 259 367 33 39 chr2 2182558 2182738 -251073845 - L2 LINE L2 0 3272 3094 2229 132 21 34 chr2 2184441 2184821 -251071762 + THE1C LTR MaLR 1 375 0 444 243 33 72 chr2 2184891 2184997 -251071586 - MLT1C LTR MaLR 0 467 358 2500 111 8 3 chr2 2184997 2185350 -251071233 - THE1A LTR MaLR 0 355 1 11399 106 9 5 chr2 2185350 2186924 -251069659 - THE1A-int LTR MaLR 0 1580 1 2580 94 8 3 chr2 2186926 2187277 -251069306 - THE1A LTR MaLR -2 353 1 444 243 33 72 chr2 2187277 2187318 -251069265 - MLT1C LTR MaLR -109 358 322 * 591 162 19 8 chr2 2187313 2187434 -251069149 - MLT1C LTR MaLR -252 138 16 427 213 44 46 chr2 2187608 2187747 -251068836 + L1ME3 LINE L1 6028 6162 0 202 351 57 53 chr2 2187962 2188227 -251068356 - L2 LINE L2 -1 3271 3006 483 221 0 0 chr2 2188313 2188440 -251068143 + (TG)n Simple_repeat Simple_repeat 2 128 0 204 217 67 33 chr2 2189782 2189842 -251066741 - MIR SINE MIR -78 184 123 2305 92 0 0 chr2 2191281 2191586 -251064997 - AluY SINE Alu -6 305 1 2348 113 158 0 chr2 2192850 2193281 -251063302 - LTR19A LTR ERV1 -4 482 1 224 209 75 45 chr2 2195125 2195192 -251061391 - L3 LINE CR1 -123 1454 1386 * 509 286 91 0 chr2 2195180 2195355 -251061228 + MIR SINE MIR 72 262 0 243 237 21 72 chr2 2195385 2195482 -251061101 - L3 LINE CR1 -205 1372 1281 2372 208 19 21 chr2 2195602 2196070 -251060513 - MLT2B1 LTR ERVL -2 518 52 1994 173 59 50 chr2 2196070 2196491 -251060092 - MSTB1 LTR MaLR -2 430 6 255 146 0 0 chr2 2196487 2196528 -251060055 - MLT2B1 LTR ERVL -461 59 19 * 220 312 117 85 chr2 2196533 2196969 -251059614 + L2 LINE L2 1563 2012 -1302 573 252 15 7 chr2 2197023 2197158 -251059425 - MLT1B LTR MaLR 0 390 255 587 322 150 38 chr2 2197619 2198012 -251058571 - L2 LINE L2 -444 2870 2522 1342 243 32 42 chr2 2198012 2198412 -251058171 + MSTD LTR MaLR 1 396 0 587 322 150 38 chr2 2198412 2199062 -251057521 - L2 LINE L2 -792 2522 1710 478 300 19 6 chr2 2199200 2199360 -251057223 + LTR16A LTR ERVL 105 266 -184 180 356 17 69 chr2 2200301 2200475 -251056108 + L2 LINE L2 3149 3313 0 1921 99 11 0 chr2 2201658 2201921 -251054662 - AluSx SINE Alu -5 307 42 201 243 0 0 chr2 2202092 2202129 -251054454 + MIR3 SINE MIR 120 156 -52 254 265 166 13 chr2 2203451 2203556 -251053027 - MIR SINE MIR -46 162 46 182 318 12 24 chr2 2204664 2204749 -251051834 + MIR SINE MIR 63 146 -116 214 282 130 92 chr2 2205439 2205570 -251051013 + MIR SINE MIR 53 188 -74 293 284 23 23 chr2 2206633 2206721 -251049862 + MER5A DNA MER1_type 22 109 -80 225 228 51 165 chr2 2207664 2207822 -251048761 + MIR SINE MIR 80 219 -43 201 196 0 0 chr2 2208099 2208145 -251048438 + (TCCA)n Simple_repeat Simple_repeat 1 46 0 473 250 0 12 chr2 2208198 2208366 -251048217 + (TCCA)n Simple_repeat Simple_repeat 2 167 0 662 211 6 0 chr2 2208397 2208572 -251048011 + (TCCA)n Simple_repeat Simple_repeat 3 178 0 610 248 8 0 chr2 2208621 2208890 -251047693 + (TCCA)n Simple_repeat Simple_repeat 1 271 0 314 304 26 26 chr2 2208960 2209075 -251047508 + MIR3 SINE MIR 94 208 0 462 271 65 7 chr2 2209317 2209472 -251047111 - MIR SINE MIR -60 202 39 23 33 0 0 chr2 2209943 2209973 -251046610 + AT_rich Low_complexity Low_complexity 1 30 0 203 185 0 19 chr2 2210097 2210151 -251046432 + (CA)n Simple_repeat Simple_repeat 1 53 0 270 160 0 0 chr2 2210607 2210657 -251045926 + (CA)n Simple_repeat Simple_repeat 1 50 0 315 312 75 45 chr2 2212941 2213249 -251043334 + L2 LINE L2 1891 2207 -1107 293 358 8 8 chr2 2213569 2213692 -251042891 - MIR SINE MIR -67 141 19 1257 157 138 46 chr2 2217579 2217840 -251038743 - AluJb SINE Alu -25 287 3 2566 111 6 3 chr2 2218299 2218661 -251037922 + THE1B LTR MaLR 2 364 0 229 237 37 89 chr2 2218951 2219086 -251037497 + L1ME LINE L1 5618 5745 -376 358 311 94 32 chr2 2219346 2219623 -251036960 - L1ME LINE L1 -345 5776 5483 2484 242 41 28 chr2 2219737 2220443 -251036140 - L1ME1 LINE L1 -4 6162 5448 1957 123 3 3 chr2 2221019 2221328 -251035255 - AluSx SINE Alu 0 309 1 260 327 109 25 chr2 2222455 2222657 -251033926 - L3 LINE CR1 -348 1229 1011 192 40 0 0 chr2 2223251 2223276 -251033307 + (TCTG)n Simple_repeat Simple_repeat 3 27 0 180 0 0 0 chr2 2223299 2223319 -251033264 + (TCTG)n Simple_repeat Simple_repeat 4 23 0 216 0 0 0 chr2 2223413 2223437 -251033146 + (TCTG)n Simple_repeat Simple_repeat 4 27 0 458 296 24 18 chr2 2224208 2224377 -251032206 + MER5A DNA MER1_type 8 177 -12 303 307 16 16 chr2 2225038 2225165 -251031418 + MER94 DNA DNA 1 127 -7 202 274 0 20 chr2 2226729 2226780 -251029803 + GA-rich Low_complexity Low_complexity 2 51 0 459 287 39 60 chr2 2228258 2228540 -251028043 - MLT1J LTR MaLR -235 276 1 188 267 50 0 chr2 2228796 2228856 -251027727 + MIR SINE MIR 53 115 -147 233 146 0 0 chr2 2229151 2229192 -251027391 - MSTB LTR MaLR 0 426 386 2097 76 8 0 chr2 2229194 2229457 -251027126 + AluSq SINE Alu 33 297 -16 321 305 195 0 chr2 2230313 2230431 -251026152 - MER5A DNA MER1_type -3 186 46 678 246 66 6 chr2 2230455 2230638 -251025945 + MER58C DNA MER1_type 21 214 -1 2344 97 3 0 chr2 2230769 2230892 -251025691 + AluSp SINE Alu 1 122 -191 577 0 27 0 chr2 2230892 2230965 -251025618 + (TAAAA)n Simple_repeat Simple_repeat 2 76 0 2344 97 3 0 chr2 2230965 2231140 -251025443 + AluSp SINE Alu 122 300 -13 271 183 29 19 chr2 2231243 2231347 -251025236 + (TAGA)n Simple_repeat Simple_repeat 1 105 0 221 94 47 47 chr2 2231417 2231481 -251025102 + (TAGA)n Simple_repeat Simple_repeat 1 64 0 1099 264 72 14 chr2 2231516 2231932 -251024651 - MER92C LTR ERV1 -8 546 107 289 296 173 37 chr2 2233607 2233769 -251022814 + MER5A DNA MER1_type 4 187 -2 180 274 65 48 chr2 2234471 2234533 -251022050 + MIR3 SINE MIR 107 169 -39 181 256 0 23 chr2 2234871 2234914 -251021669 + L2 LINE L2 3263 3304 -9 1429 178 71 32 chr2 2235101 2235480 -251021103 - Tigger2 DNA MER2_type 0 2718 4 2185 152 33 31 chr2 2235532 2236081 -251020502 - MLT2A2 LTR ERVL 0 554 1 249 98 0 0 chr2 2236471 2236512 -251020071 + (GCTG)n Simple_repeat Simple_repeat 4 44 0 323 319 17 9 chr2 2236575 2236691 -251019892 + MIR SINE MIR 82 198 -64 183 156 0 0 chr2 2237951 2237983 -251018600 + (ATGGTG)n Simple_repeat Simple_repeat 6 37 0 2068 116 141 0 chr2 2238163 2238533 -251018050 - MSTA LTR MaLR 0 428 7 8623 170 37 8 chr2 2238539 2240129 -251016454 - MSTA-int LTR MaLR -14 1637 1 2200 158 94 5 chr2 2240129 2240522 -251016061 - MSTA LTR MaLR 0 428 1 317 333 52 82 chr2 2240522 2240789 -251015794 - L1MEd LINE L1 -4097 2213 1955 5858 138 1 2 chr2 2240799 2241933 -251014650 + L1PA13 LINE L1 5024 6163 0 522 306 113 63 chr2 2242080 2242808 -251013775 - L1MEd LINE L1 -795 1695 928 37 62 0 0 chr2 2242808 2242873 -251013710 + AT_rich Low_complexity Low_complexity 1 65 0 1001 171 57 5 chr2 2242888 2243036 -251013547 - L1MA9 LINE L1 0 6312 6148 294 29 0 0 chr2 2243036 2243071 -251013512 + (TG)n Simple_repeat Simple_repeat 2 36 0 1001 171 57 5 chr2 2243071 2243132 -251013451 - L1MA9 LINE L1 -164 6148 6092 657 209 36 0 chr2 2243142 2243281 -251013302 - FRAM SINE Alu -32 144 1 2306 167 48 74 chr2 2243282 2243842 -251012741 - L1MA9 LINE L1 -201 6111 5567 306 301 195 16 chr2 2243847 2244093 -251012490 - L1MEd LINE L1 -5233 886 597 664 266 112 33 chr2 2245209 2245370 -251011213 - MLT1C LTR MaLR 0 467 320 1260 225 63 42 chr2 2245370 2245748 -251010835 + MLT1B LTR MaLR 5 390 0 664 266 112 33 chr2 2245748 2245991 -251010592 - MLT1C LTR MaLR -147 320 22 203 337 20 41 chr2 2246215 2246313 -251010270 + MIR3 SINE MIR 105 200 -8 193 290 32 32 chr2 2246541 2246603 -251009980 + L2 LINE L2 3232 3293 -20 641 261 78 78 chr2 2247672 2248055 -251008528 + MLT1C LTR MaLR 1 383 -84 325 336 38 0 chr2 2248316 2248447 -251008136 + MIR SINE MIR 118 253 -9 185 324 29 10 chr2 2248563 2248665 -251007918 - MIR SINE MIR -131 131 28 2247 110 10 10 chr2 2248973 2249283 -251007300 - AluSp SINE Alu -3 310 1 227 260 0 60 chr2 2249887 2249987 -251006596 + (CAGG)n Simple_repeat Simple_repeat 3 96 0 354 281 0 62 chr2 2250007 2250185 -251006398 + (CAGG)n Simple_repeat Simple_repeat 2 168 0 441 182 13 7 chr2 2251603 2251757 -251004826 + (CA)n Simple_repeat Simple_repeat 1 155 0 1052 247 115 20 chr2 2251788 2252144 -251004439 + MLT1B LTR MaLR 1 390 0 206 242 15 30 chr2 2253121 2253187 -251003396 + MIR SINE MIR 86 150 -58 197 208 0 130 chr2 2253188 2253265 -251003318 + MER5A DNA MER1_type 33 99 -90 296 333 199 20 chr2 2254721 2255124 -251001459 - L2 LINE L2 -13 3300 2826 252 258 32 11 chr2 2258303 2258396 -250998187 + C-rich Low_complexity Low_complexity 5 99 0 464 79 87 24 chr2 2258927 2259421 -250997162 + (CA)n Simple_repeat Simple_repeat 1 524 0 386 186 48 9 chr2 2259445 2259913 -250996670 + (CA)n Simple_repeat Simple_repeat 1 486 0 253 197 45 0 chr2 2259927 2259993 -250996590 + (CA)n Simple_repeat Simple_repeat 2 70 0 416 143 65 0 chr2 2260012 2260166 -250996417 + (CA)n Simple_repeat Simple_repeat 1 164 0 426 148 63 56 chr2 2260208 2260825 -250995758 + (ATGGTG)n Simple_repeat Simple_repeat 1 621 0 318 185 0 0 chr2 2262047 2262101 -250994482 - MER63 DNA MER1_type -24 1036 983 * 522 175 167 0 chr2 2262099 2262213 -250994370 - MER63 DNA MER1_type -302 760 2 240 281 89 44 chr2 2262820 2262955 -250993628 + L2 LINE L2 3132 3272 0 267 140 0 0 chr2 2263099 2263149 -250993434 + (GGGGA)n Simple_repeat Simple_repeat 2 51 0 261 0 0 0 chr2 2263398 2263427 -250993156 + (CA)n Simple_repeat Simple_repeat 2 30 0 21 36 0 0 chr2 2264613 2264641 -250991942 + AT_rich Low_complexity Low_complexity 1 28 0 222 347 0 0 chr2 2264650 2264722 -250991861 + (CATATA)n Simple_repeat Simple_repeat 6 77 0 697 248 72 33 chr2 2264892 2265199 -250991384 + L1MD2 LINE L1 4965 5283 -863 * 968 285 94 79 chr2 2265197 2265591 -250990992 + L1MD2 LINE L1 5560 5946 -413 2535 87 0 3 chr2 2265591 2265902 -250990681 - AluSx SINE Alu -2 310 1 968 285 94 79 chr2 2265902 2266282 -250990301 + L1MD2 LINE L1 5946 6346 -13 297 255 131 41 chr2 2268573 2268718 -250987865 - MER5B DNA MER1_type -18 160 3 263 259 108 86 chr2 2268740 2268879 -250987704 - MIR SINE MIR -112 150 9 1693 160 10 7 chr2 2269852 2270145 -250986438 + MER49 LTR ERV1 1 294 -629 6660 91 11 0 chr2 2270204 2271314 -250985269 + L1PA10 LINE L1 5046 6164 -4 1373 204 36 24 chr2 2271327 2271660 -250984923 + MER4D LTR ERV1 567 903 0 187 28 56 28 chr2 2272878 2272914 -250983669 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 281 290 133 10 chr2 2273118 2273241 -250983342 - MER5A DNA MER1_type -10 179 27 218 311 125 25 chr2 2273277 2273502 -250983081 + MIR SINE MIR 8 262 0 237 33 0 0 chr2 2273827 2273857 -250982726 + (TG)n Simple_repeat Simple_repeat 2 31 0 1737 181 0 7 chr2 2274079 2274383 -250982200 + AluJb SINE Alu 1 302 -10 230 71 0 0 chr2 2275237 2275265 -250981318 + LTR47A LTR ERVL 4 31 -421 1980 161 130 3 chr2 2275265 2275649 -250980934 + LTR47A LTR ERVL 4 436 -16 18749 168 60 13 chr2 2276957 2280737 -250975846 + L1M1 LINE L1 19 3619 -4105 1011 23 0 38 chr2 2280737 2280868 -250975715 - L1PA6 LINE L1 -7 6147 6022 18749 168 60 13 chr2 2280868 2281794 -250974789 + L1M1 LINE L1 3619 4500 -3224 2171 118 3 0 chr2 2281794 2282100 -250974483 + AluSq SINE Alu 1 307 -6 18749 168 60 13 chr2 2282100 2284047 -250972536 + L1M1 LINE L1 4500 6983 -741 445 241 19 86 chr2 2284070 2284177 -250972406 + MLT1F1 LTR MaLR 407 502 -65 2206 92 0 0 chr2 2284177 2284486 -250972097 - AluSg SINE Alu 0 309 1 445 241 19 86 chr2 2284486 2284539 -250972044 + MLT1F1 LTR MaLR 502 557 -10 353 275 84 41 chr2 2284562 2284783 -250971800 + MIR SINE MIR 20 249 -13 452 335 180 12 chr2 2285413 2285735 -250970848 + L3 LINE CR1 1114 1489 -88 297 310 90 21 chr2 2287379 2287524 -250969059 - MIR SINE MIR -52 210 56 665 256 61 22 chr2 2287557 2287737 -250968846 - MER5A DNA MER1_type -2 187 1 228 86 0 0 chr2 2288279 2288314 -250968269 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1783 195 14 24 chr2 2289152 2289522 -250967061 - MER47A DNA MER2_type 0 366 1 1492 151 3 56 chr2 2289529 2289661 -250966922 + MER2 DNA MER2_type 2 113 -232 1320 199 34 21 chr2 2289661 2289952 -250966631 - AluJb SINE Alu -17 295 1 1492 151 3 56 chr2 2289952 2290103 -250966480 + MER2 DNA MER2_type 113 270 -75 641 327 154 34 chr2 2290218 2291319 -250965264 + L2 LINE L2 1744 2977 -337 378 0 0 0 chr2 2292800 2292842 -250963741 + (CA)n Simple_repeat Simple_repeat 1 42 0 1633 213 20 20 chr2 2292843 2293190 -250963393 + MER7A DNA MER2_type 2 346 0 2429 150 33 17 chr2 2294926 2295345 -250961238 + MSTA LTR MaLR 1 426 -2 410 293 61 50 chr2 2296066 2296162 -250960421 - MIR SINE MIR -19 243 149 2266 84 3 0 chr2 2296162 2296459 -250960124 - AluSp SINE Alu -14 299 2 410 293 61 50 chr2 2296459 2296560 -250960023 - MIR SINE MIR -113 149 44 641 311 48 32 chr2 2297987 2298235 -250958348 + MIR SINE MIR 8 259 -3 391 204 23 11 chr2 2298235 2298323 -250958260 + MLT1A1 LTR MaLR 1 89 -276 269 200 9 29 chr2 2298536 2298641 -250957942 + (TG)n Simple_repeat Simple_repeat 2 104 0 344 242 7 39 chr2 2298666 2299089 -250957494 + (TG)n Simple_repeat Simple_repeat 1 409 0 311 281 149 9 chr2 2300854 2301075 -250955508 + L1ME LINE L1 5097 5348 -798 249 310 120 37 chr2 2301081 2301381 -250955202 + L1ME LINE L1 5368 5692 -429 633 316 24 14 chr2 2301437 2301649 -250954934 - L2 LINE L2 0 3313 3100 237 189 117 99 chr2 2301824 2301935 -250954648 + L1ME4a LINE L1 5973 6085 -36 18364 62 10 17 chr2 2306964 2309286 -250947297 + HERVL LTR ERVL 3105 5410 -244 1604 162 184 11 chr2 2311211 2311576 -250945007 - MSTA LTR MaLR 0 428 1 8332 157 26 51 chr2 2311576 2313195 -250943388 - MSTA-int LTR MaLR 0 1580 3 2093 139 126 23 chr2 2313197 2313585 -250942998 - MSTA LTR MaLR 0 428 1 707 261 123 22 chr2 2314114 2314527 -250942056 + MLT1C LTR MaLR 1 455 -12 392 267 18 0 chr2 2314667 2315132 -250941451 + (CA)n Simple_repeat Simple_repeat 1 473 0 233 274 171 17 chr2 2315563 2315680 -250940903 - MIR SINE MIR -5 257 123 201 312 17 0 chr2 2316424 2316517 -250940066 - MIR SINE MIR -56 152 58 401 313 72 6 chr2 2316919 2317085 -250939498 - MIR SINE MIR -33 229 53 3475 216 71 25 chr2 2317415 2318400 -250938183 + L1MC3 LINE L1 6748 7777 -8 2205 104 139 11 chr2 2318522 2318897 -250937686 + MSTA LTR MaLR 6 428 0 794 50 0 0 chr2 2320420 2320521 -250936062 + HERVL-A1 LTR ERVL 5554 5654 0 2722 106 20 40 chr2 2320522 2320974 -250935609 + MLT2A1 LTR ERVL 2 444 0 1758 135 46 0 chr2 2322085 2322367 -250934216 + AluSq SINE Alu 1 295 -18 1030 303 157 35 chr2 2323133 2323994 -250932589 - L2 LINE L2 -1627 1687 722 351 269 23 110 chr2 2324038 2324302 -250932281 - L2 LINE L2 -2764 550 310 2292 74 0 7 chr2 2325954 2326237 -250930346 - AluY SINE Alu -10 301 21 196 337 11 11 chr2 2326512 2326601 -250929982 - L3 LINE CR1 -144 1433 1345 416 298 51 28 chr2 2327143 2327321 -250929262 + MIR SINE MIR 61 242 -20 249 217 16 71 chr2 2328141 2328325 -250928258 + (CA)n Simple_repeat Simple_repeat 1 174 0 392 199 11 72 chr2 2328725 2328906 -250927677 + (CA)n Simple_repeat Simple_repeat 1 170 0 433 274 17 23 chr2 2328944 2329119 -250927464 + (CA)n Simple_repeat Simple_repeat 2 175 0 2263 121 0 3 chr2 2330754 2331060 -250925523 - AluSx SINE Alu -7 305 1 283 258 75 21 chr2 2331762 2331855 -250924728 + MIR SINE MIR 103 200 -62 260 310 34 54 chr2 2335131 2335428 -250921155 - L2 LINE L2 -78 3235 2945 2334 78 29 13 chr2 2335436 2335742 -250920841 + AluY SINE Alu 1 311 0 358 326 228 12 chr2 2335763 2336328 -250920255 - L2 LINE L2 -911 2403 1717 796 262 5 0 chr2 2336832 2337023 -250919560 + MLT1A1 LTR MaLR 172 363 -2 8427 178 30 46 chr2 2337110 2340129 -250916454 + L1MA8 LINE L1 3319 6286 -5 27 0 0 0 chr2 2340130 2340157 -250916426 + AT_rich Low_complexity Low_complexity 1 27 0 290 228 40 40 chr2 2341211 2341312 -250915271 - MER45 DNA AcHobo -898 142 42 625 169 23 31 chr2 2342133 2342197 -250914386 + MER45A DNA AcHobo 42 105 -1476 2262 115 0 3 chr2 2342197 2342493 -250914090 - AluSq SINE Alu -18 295 1 625 169 23 31 chr2 2342493 2342558 -250914025 + MER45A DNA AcHobo 105 170 -8 233 338 15 0 chr2 2342578 2342646 -250913937 + MIR3 SINE MIR 103 171 -37 287 193 102 45 chr2 2342940 2343028 -250913555 + MIR SINE MIR 108 200 -62 2647 68 0 0 chr2 2343090 2343399 -250913184 - AluY SINE Alu -1 310 2 759 333 36 45 chr2 2343497 2344303 -250912280 + L1MEc LINE L1 388 1186 -5377 3892 181 74 9 chr2 2344304 2345258 -250911325 + L1MB3 LINE L1 5165 6182 -1 423 184 34 54 chr2 2345265 2345412 -250911171 + L1MEc LINE L1 1178 1321 -5242 317 333 78 29 chr2 2345442 2345646 -250910937 + L1MEc LINE L1 1277 1490 -4894 333 283 87 46 chr2 2345929 2346148 -250910435 + L1ME LINE L1 5558 5785 -336 1715 175 0 31 chr2 2346204 2346539 -250910044 - AluJb SINE Alu 0 326 1 207 0 0 0 chr2 2347117 2347140 -250909443 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 21 82 0 0 chr2 2347807 2347856 -250908727 + AT_rich Low_complexity Low_complexity 1 49 0 2621 257 26 57 chr2 2348036 2348103 -250908480 - MER63C DNA MER1_type -138 922 854 2149 125 7 3 chr2 2348103 2348400 -250908183 - AluSq SINE Alu -15 298 1 2621 257 26 57 chr2 2348400 2349055 -250907528 - MER63C DNA MER1_type -206 854 233 710 208 19 19 chr2 2349055 2349214 -250907369 - L1MC1 LINE L1 0 6333 6175 2621 257 26 57 chr2 2349214 2349437 -250907146 - MER63C DNA MER1_type -827 233 5 294 73 0 0 chr2 2349659 2349700 -250906883 + (TTGG)n Simple_repeat Simple_repeat 2 42 0 219 286 52 45 chr2 2349759 2349913 -250906670 + L2 LINE L2 2898 3052 -220 1698 264 146 26 chr2 2350552 2350880 -250905703 - L1ME3A LINE L1 -1 6169 5882 4277 101 28 2 chr2 2350880 2351523 -250905060 - MER4A LTR ERV1 -2 662 3 1698 264 146 26 chr2 2351523 2352047 -250904536 - L1ME3A LINE L1 -288 5882 5187 302 313 76 8 chr2 2352164 2352295 -250904288 - MIR SINE MIR -91 171 32 256 289 19 48 chr2 2352614 2352718 -250903865 - L2 LINE L2 -95 3218 3118 200 258 17 146 chr2 2352750 2352928 -250903655 - L2 LINE L2 -201 3071 2917 409 261 112 63 chr2 2352992 2353465 -250903118 + MLT1H LTR MaLR 4 540 -9 351 113 0 0 chr2 2353557 2353610 -250902973 + (T)n Simple_repeat Simple_repeat 1 53 0 205 324 0 0 chr2 2353927 2354001 -250902582 + (CCCA)n Simple_repeat Simple_repeat 2 75 0 1482 326 163 17 chr2 2354001 2355263 -250901320 + L2 LINE L2 1478 2923 -391 2647 71 0 0 chr2 2355263 2355573 -250901010 + AluY SINE Alu 1 310 -1 209 269 171 23 chr2 2356795 2356970 -250899613 + L2 LINE L2 3113 3313 0 241 267 58 12 chr2 2358296 2358382 -250898201 - MIR SINE MIR -68 140 51 267 143 0 0 chr2 2358522 2358564 -250898019 - 5S rRNA rRNA -79 42 1 410 177 13 0 chr2 2358828 2358907 -250897676 + MADE1 DNA Mariner 1 80 0 192 125 0 0 chr2 2359041 2359073 -250897510 + (TTTTC)n Simple_repeat Simple_repeat 4 35 0 231 173 0 0 chr2 2359236 2359288 -250897295 + (CA)n Simple_repeat Simple_repeat 1 52 0 227 143 41 0 chr2 2359418 2359467 -250897116 + A-rich Low_complexity Low_complexity 2 52 0 191 234 64 0 chr2 2361562 2361609 -250894974 - L2 LINE L2 -11 3302 3253 1617 182 23 28 chr2 2361658 2362010 -250894573 - L1MB2 LINE L1 0 6171 5822 355 194 0 0 chr2 2362017 2362089 -250894494 - L1MB2 LINE L1 -666 5517 5446 219 358 0 0 chr2 2362923 2363004 -250893579 + MIR SINE MIR 56 136 -72 23 0 0 0 chr2 2363760 2363783 -250892800 + AT_rich Low_complexity Low_complexity 1 23 0 267 342 43 0 chr2 2367550 2367667 -250888916 - MIR SINE MIR -108 154 33 2314 114 0 0 chr2 2367930 2368229 -250888354 - AluSg SINE Alu -11 299 1 421 208 37 34 chr2 2368428 2368750 -250887833 + (TG)n Simple_repeat Simple_repeat 1 323 0 1009 282 59 9 chr2 2368982 2369404 -250887179 - L1MB2 LINE L1 -1213 4933 4491 900 321 23 19 chr2 2369423 2369900 -250886683 - L1MB2 LINE L1 -2318 3828 3350 1049 269 117 37 chr2 2370062 2370549 -250886034 - LTR41 LTR ERVL -15 758 233 849 275 93 7 chr2 2370664 2370955 -250885628 - LTR41 LTR ERVL -457 316 1 2408 78 28 11 chr2 2371069 2371427 -250885156 - L1PA8 LINE L1 -13 6159 5796 535 311 43 20 chr2 2371711 2372211 -250884372 - L1MEd LINE L1 -4571 1739 1172 2192 117 7 0 chr2 2372208 2372517 -250884066 - AluSx SINE Alu -9 303 1 1213 219 33 91 chr2 2373382 2373432 -250883151 + MLT1A2 LTR MaLR 1 52 -322 2211 102 0 7 chr2 2373432 2373735 -250882848 - AluSq SINE Alu 0 313 13 1213 219 33 91 chr2 2373735 2374081 -250882502 + MLT1A2 LTR MaLR 52 374 0 211 286 95 29 chr2 2376453 2376558 -250880025 + MIR3 SINE MIR 49 160 -48 23 0 0 0 chr2 2376872 2376895 -250879688 + AT_rich Low_complexity Low_complexity 1 23 0 317 235 88 0 chr2 2376895 2376997 -250879586 - L1MA9 LINE L1 -22 6290 6180 1700 205 57 8 chr2 2377003 2377281 -250879302 - L1MA9 LINE L1 -235 6077 5775 225 83 0 0 chr2 2377281 2377317 -250879266 + (TG)n Simple_repeat Simple_repeat 1 36 0 1700 205 57 8 chr2 2377317 2377408 -250879175 - L1MA9 LINE L1 -537 5775 5690 312 153 53 38 chr2 2377980 2378111 -250878472 + (AGTTG)n Simple_repeat Simple_repeat 3 135 0 1201 240 53 120 chr2 2378286 2378891 -250877692 - MLT1E1 LTR MaLR 0 637 92 189 340 20 30 chr2 2379174 2379274 -250877309 - MIR SINE MIR -62 146 48 2114 122 0 10 chr2 2379543 2379847 -250876736 - AluSx SINE Alu -9 303 3 279 322 0 11 chr2 2381279 2381366 -250875217 + MIR3 SINE MIR 117 202 -6 487 157 24 0 chr2 2381394 2381477 -250875106 - L1MB5 LINE L1 -12 6162 6078 1444 136 9 5 chr2 2383315 2383535 -250873048 + AluSq SINE Alu 71 291 -22 899 248 17 8 chr2 2384019 2384253 -250872330 + MLT1D LTR MaLR 7 242 -263 473 311 54 11 chr2 2385051 2385311 -250871272 - MER90 LTR ERV1 -210 404 134 216 200 0 0 chr2 2385710 2385775 -250870808 + GA-rich Low_complexity Low_complexity 2 66 0 184 79 48 48 chr2 2387164 2387227 -250869356 + (CAA)n Simple_repeat Simple_repeat 3 65 0 292 205 26 45 chr2 2387227 2387383 -250869200 + (CACAC)n Simple_repeat Simple_repeat 1 153 0 207 62 62 31 chr2 2387419 2387484 -250869099 + (CACAA)n Simple_repeat Simple_repeat 5 71 0 224 130 48 48 chr2 2387595 2387741 -250868842 + (CACAA)n Simple_repeat Simple_repeat 2 147 0 285 255 157 24 chr2 2388653 2388890 -250867693 + MLT1J1 LTR MaLR 19 296 -154 196 298 48 48 chr2 2389394 2389498 -250867085 + L2 LINE L2 3208 3311 -2 201 313 12 0 chr2 2389899 2389979 -250866604 - MIR SINE MIR 0 262 182 197 358 0 15 chr2 2389990 2390057 -250866526 - MIR SINE MIR -181 81 16 217 300 127 36 chr2 2390887 2391107 -250865476 + L2 LINE L2 2945 3184 -129 1367 306 37 15 chr2 2391132 2391592 -250864991 - MLT1J LTR MaLR -19 492 23 2318 106 0 0 chr2 2391814 2392125 -250864458 + AluSx SINE Alu 1 311 -1 1519 197 122 22 chr2 2395817 2396177 -250860406 - MSTD LTR MaLR 0 396 1 852 108 7 40 chr2 2397414 2397562 -250859021 - FLAM_C SINE Alu 0 143 1 962 156 6 19 chr2 2397790 2397950 -250858633 + L1PA8A LINE L1 5971 6128 -3 1589 277 47 38 chr2 2398459 2399036 -250857547 + MLT1E LTR MaLR 10 591 -2 368 265 0 6 chr2 2401512 2401682 -250854901 + C-rich Low_complexity Low_complexity 4 172 0 294 138 50 12 chr2 2401685 2401765 -250854818 + CT-rich Low_complexity Low_complexity 3 85 0 2072 137 42 31 chr2 2401845 2402204 -250854379 + THE1B LTR MaLR 1 363 -1 250 242 30 0 chr2 2402568 2402634 -250853949 + L2 LINE L2 2987 3054 -218 191 244 22 0 chr2 2402700 2402745 -250853838 + L2 LINE L2 3223 3268 -4 375 289 97 50 chr2 2404742 2405123 -250851460 + HAL1 LINE L1 1 399 -2108 1057 222 31 13 chr2 2405464 2405689 -250850894 - MER101B LTR ERV1 -341 229 1 374 366 79 9 chr2 2405702 2406030 -250850553 + HAL1 LINE L1 491 841 -1666 461 205 252 0 chr2 2406774 2406891 -250849692 + MLT2D LTR ERVL 226 312 -102 198 0 0 0 chr2 2406891 2406913 -250849670 + (TC)n Simple_repeat Simple_repeat 1 22 0 461 205 252 0 chr2 2406913 2406946 -250849637 + MLT2D LTR ERVL 312 414 0 471 240 0 0 chr2 2407870 2407966 -250848617 - L1MA7 LINE L1 -186 6105 6010 629 183 41 41 chr2 2407969 2408138 -250848445 + L1MA7 LINE L1 6123 6291 0 198 209 47 0 chr2 2408758 2408801 -250847782 - MIR SINE MIR -111 151 107 249 326 38 15 chr2 2410193 2410325 -250846258 + L1ME LINE L1 5634 5768 -353 2303 102 0 6 chr2 2410562 2410876 -250845707 + AluSx SINE Alu 1 312 0 254 284 69 35 chr2 2411342 2411458 -250845125 + MIR3 SINE MIR 62 181 -27 193 231 123 15 chr2 2412774 2412839 -250843744 - MIR SINE MIR -118 144 73 216 0 0 0 chr2 2414333 2414357 -250842226 + (GGATG)n Simple_repeat Simple_repeat 3 26 0 306 287 189 14 chr2 2414887 2415030 -250841553 - MIR SINE MIR 0 262 95 774 244 114 36 chr2 2416432 2416739 -250839844 + MLT1D LTR MaLR 47 377 -128 192 195 0 24 chr2 2417645 2417686 -250838897 + MIR SINE MIR 33 72 -136 189 107 0 0 chr2 2418193 2418221 -250838362 + (TC)n Simple_repeat Simple_repeat 2 29 0 319 355 112 0 chr2 2419705 2419874 -250836709 - MIR SINE MIR -19 243 56 364 252 37 0 chr2 2420012 2420119 -250836464 + LTR33 LTR ERVL 101 211 -310 2188 92 3 0 chr2 2421371 2421665 -250834918 - AluSx SINE Alu -17 295 1 324 358 0 15 chr2 2423086 2423220 -250833363 - MER94 DNA DNA -2 132 1 222 343 59 20 chr2 2423502 2423604 -250832979 + L2 LINE L2 2948 3053 -219 227 375 36 27 chr2 2425396 2425508 -250831075 - L2 LINE L2 -18 3254 3142 360 0 0 0 chr2 2425710 2425750 -250830833 + (CA)n Simple_repeat Simple_repeat 1 40 0 234 0 0 0 chr2 2425749 2425775 -250830808 + (GA)n Simple_repeat Simple_repeat 2 27 0 * 220 356 134 18 chr2 2426153 2426706 -250829877 + L2 LINE L2 2325 2941 -373 187 185 160 76 chr2 2426874 2426993 -250829590 + L2 LINE L2 3137 3265 -7 250 226 11 113 chr2 2427350 2427536 -250829047 + GA-rich Low_complexity Low_complexity 5 171 0 224 255 246 0 chr2 2428941 2429060 -250827523 - MIR SINE MIR -65 143 41 21 0 0 0 chr2 2429335 2429356 -250827227 + AT_rich Low_complexity Low_complexity 1 21 0 240 297 63 51 chr2 2430329 2430504 -250826079 - MIR SINE MIR -6 256 80 237 394 32 7 chr2 2430916 2431071 -250825512 - L2 LINE L2 -599 2715 2557 350 289 0 0 chr2 2431084 2431167 -250825416 + L2 LINE L2 3189 3271 -1 206 223 0 109 chr2 2431619 2431812 -250824771 + C-rich Low_complexity Low_complexity 5 176 0 218 230 0 102 chr2 2432014 2432210 -250824373 + C-rich Low_complexity Low_complexity 2 177 0 252 208 18 83 chr2 2432293 2432461 -250824122 + C-rich Low_complexity Low_complexity 2 158 0 741 230 73 0 chr2 2432595 2432760 -250823823 - MER5B DNA MER1_type -1 177 1 1611 235 40 6 chr2 2434630 2434983 -250821600 - MLT1A1 LTR MaLR 0 365 1 738 323 126 41 chr2 2435116 2436095 -250820488 + L2 LINE L2 206 1267 -2047 236 298 50 16 chr2 2436098 2436219 -250820364 + L2 LINE L2 1581 1705 -1609 625 197 16 0 chr2 2436366 2436493 -250820090 + L1MC2 LINE L1 6215 6343 -1 571 269 84 52 chr2 2437507 2437988 -250818595 - MLT1H1 LTR MaLR 0 555 62 1046 132 44 11 chr2 2438251 2438565 -250818018 + THE1C LTR MaLR 1 375 0 10524 126 17 14 chr2 2438565 2440140 -250816443 + THE1C-int LTR MaLR 1 1580 0 1065 127 78 11 chr2 2440140 2440444 -250816139 + THE1C LTR MaLR 1 375 0 242 292 67 0 chr2 2440490 2440579 -250816004 - LTR16A LTR ERVL -260 190 96 276 330 19 0 chr2 2440958 2441064 -250815519 - HERV16 LTR ERVL -3575 1421 1314 212 209 0 0 chr2 2442068 2442111 -250814472 - L3 LINE CR1 -124 1453 1411 318 301 66 22 chr2 2442209 2442392 -250814191 - LTR16A LTR ERVL -93 357 167 359 200 42 11 chr2 2442447 2442542 -250814041 + L1MD3 LINE L1 7898 7995 0 236 310 159 7 chr2 2443227 2443372 -250813211 + MIR SINE MIR 14 180 -82 1711 193 171 8 chr2 2443654 2444022 -250812561 + MSTA LTR MaLR 1 428 0 467 297 31 0 chr2 2445666 2445794 -250810789 + MIR3 SINE MIR 72 203 -5 943 233 43 4 chr2 2446088 2446320 -250810263 - MLT1E LTR MaLR -9 584 344 413 295 63 16 chr2 2446407 2446597 -250809986 - MLT1E LTR MaLR -394 199 1 320 300 131 31 chr2 2446678 2447098 -250809485 - L2 LINE L2 -365 2949 2488 188 228 88 35 chr2 2447485 2447542 -250809041 + L2 LINE L2 3206 3265 -7 1272 270 91 0 chr2 2450278 2450596 -250805987 + MER7A DNA MER2_type 1 345 -1 332 303 0 64 chr2 2454566 2454806 -250801777 + C-rich Low_complexity Low_complexity 1 224 0 307 77 19 0 chr2 2456406 2456458 -250800125 - AluSx SINE Alu 0 301 249 1181 135 65 0 chr2 2456458 2456643 -250799940 - AluSx SINE Alu -115 197 1 349 307 50 14 chr2 2457148 2457288 -250799295 + MIR SINE MIR 5 149 -113 2080 259 39 74 chr2 2458244 2458654 -250797929 + MER21B LTR ERV1 1 373 -490 2354 111 39 28 chr2 2458654 2459014 -250797569 - THE1B LTR MaLR 0 364 1 2080 259 39 74 chr2 2459014 2459369 -250797214 + MER21B LTR ERV1 373 739 -124 315 271 243 11 chr2 2460495 2460672 -250795911 - MIR SINE MIR 0 262 45 250 352 19 0 chr2 2463116 2463221 -250793362 + MIR SINE MIR 31 137 -71 2200 151 8 30 chr2 2463959 2464331 -250792252 - THE1B LTR MaLR 0 364 1 302 353 131 20 chr2 2464389 2464986 -250791597 + L2 LINE L2 2047 2709 -605 2297 220 59 108 chr2 2465190 2465275 -250791308 + L1MC4 LINE L1 6460 6548 -1447 2166 91 10 3 chr2 2465275 2465573 -250791010 + AluSq SINE Alu 1 300 -13 2297 220 59 108 chr2 2465573 2466794 -250789789 + L1MC4 LINE L1 6548 7757 -238 384 22 0 0 chr2 2470150 2470195 -250786388 + (TG)n Simple_repeat Simple_repeat 2 46 0 * 441 0 0 0 chr2 2470194 2470243 -250786340 + (TA)n Simple_repeat Simple_repeat 1 49 0 274 326 52 22 chr2 2470576 2470711 -250785872 - LTR16A1 LTR ERVL 0 457 319 234 0 0 0 chr2 2471163 2471189 -250785394 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 183 302 63 0 chr2 2471325 2471388 -250785195 + MIR SINE MIR 73 139 -123 4915 42 2 0 chr2 2471917 2472495 -250784088 + L1PA5 LINE L1 5576 6154 0 182 313 104 87 chr2 2472509 2472960 -250783623 - L2 LINE L2 -480 2834 2376 2157 117 0 0 chr2 2473991 2474297 -250782286 + AluSx SINE Alu 1 306 0 284 287 116 31 chr2 2474333 2474462 -250782121 + MIR SINE MIR 1 140 -122 221 363 66 0 chr2 2474952 2475043 -250781540 - MIR SINE MIR -115 147 51 280 286 55 11 chr2 2477760 2477851 -250778732 + L2 LINE L2 3162 3256 -16 1434 266 93 21 chr2 2481122 2481634 -250774949 - MER82 DNA MER2_type -6 647 99 1404 232 78 5 chr2 2481634 2481979 -250774604 + MLT2D LTR ERVL 1 378 -36 342 0 0 0 chr2 2481979 2482017 -250774566 + (CA)n Simple_repeat Simple_repeat 2 39 0 1404 232 78 5 chr2 2482017 2482055 -250774528 + MLT2D LTR ERVL 378 412 -2 417 176 0 0 chr2 2482061 2482129 -250774454 - MER82 DNA MER2_type -556 97 30 192 169 102 34 chr2 2485006 2485065 -250771518 + MIR SINE MIR 91 153 -55 347 301 18 26 chr2 2485394 2485507 -250771076 + MIR SINE MIR 21 132 -76 463 227 120 7 chr2 2485632 2485782 -250770801 + MER58B DNA MER1_type 172 338 -3 215 233 0 14 chr2 2487431 2487504 -250769079 + GA-rich Low_complexity Low_complexity 1 72 0 680 179 6 28 chr2 2487522 2487701 -250768882 + GA-rich Low_complexity Low_complexity 1 175 0 293 295 93 27 chr2 2488019 2488202 -250768381 - MLT1J1 LTR MaLR -16 430 236 337 358 18 0 chr2 2488235 2488400 -250768183 - MLT1J2 LTR MaLR -279 171 4 2573 103 22 8 chr2 2488451 2488809 -250767774 + THE1B LTR MaLR 1 363 -1 13040 119 18 6 chr2 2489160 2491208 -250765375 - Tigger1 DNA MER2_type 0 2418 346 194 291 0 0 chr2 2491868 2491923 -250764660 - L2 LINE L2 -575 2739 2685 335 228 79 59 chr2 2493851 2493952 -250762631 - L1ME4a LINE L1 -12 6109 6007 347 350 55 14 chr2 2494556 2494773 -250761810 - MIR SINE MIR -15 247 22 280 229 16 0 chr2 2495840 2495901 -250760682 + L2 LINE L2 2998 3059 -213 188 323 0 0 chr2 2496069 2496131 -250760452 + L2 LINE L2 3187 3248 -24 233 353 8 8 chr2 2496146 2496265 -250760318 + MLT1E LTR MaLR 44 162 -431 244 233 41 0 chr2 2496299 2496372 -250760211 + MLT1E LTR MaLR 431 506 -87 215 324 65 88 chr2 2496588 2496758 -250759825 + MIR SINE MIR 1 166 -96 271 298 67 0 chr2 2496764 2496868 -250759715 - L2 LINE L2 -8 3264 3154 3592 14 0 10 chr2 2498349 2498793 -250757790 - L1PA2 LINE L1 0 6155 5747 4075 8 0 0 chr2 2498793 2499269 -250757314 + L1PA2 LINE L1 5279 5754 -401 248 318 131 0 chr2 2499832 2499939 -250756644 + MIR SINE MIR 33 153 -55 268 271 10 165 chr2 2500342 2500737 -250755846 - L2 LINE L2 -80 3233 2900 204 329 0 14 chr2 2500726 2500799 -250755784 + L2 LINE L2 3242 3313 0 * 2615 62 0 0 chr2 2500802 2501110 -250755473 - AluY SINE Alu -3 308 1 309 269 168 30 chr2 2501165 2501332 -250755251 - L2 LINE L2 -493 2821 2632 264 156 0 0 chr2 2501444 2501489 -250755094 + L1PA16 LINE L1 6121 6165 -1 5686 250 58 45 chr2 2501785 2502260 -250754323 + L1MB1 LINE L1 1182 1649 -4755 19332 45 0 1 chr2 2502260 2505411 -250751172 - L1PA5 LINE L1 -4 6150 3001 5686 250 58 45 chr2 2505411 2505552 -250751031 + L1MB1 LINE L1 1649 1787 -4617 180 0 0 0 chr2 2505552 2505572 -250751011 + (CA)n Simple_repeat Simple_repeat 1 20 0 5686 250 58 45 chr2 2505572 2507549 -250749034 + L1MB1 LINE L1 1787 3736 -2668 664 122 0 0 chr2 2507549 2507639 -250748944 + AluJ/FLAM SINE Alu 13 102 -210 676 200 0 16 chr2 2507646 2507771 -250748812 + FRAM SINE Alu 53 175 -1 5686 250 58 45 chr2 2507771 2510274 -250746309 + L1MB1 LINE L1 3741 6402 -2 3671 201 57 103 chr2 2510297 2511076 -250745507 - MLT1B-int LTR MaLR -125 1246 551 2722 123 0 5 chr2 2511076 2511484 -250745099 - L1PA13 LINE L1 0 6163 5758 3671 201 57 103 chr2 2511484 2512011 -250744572 - MLT1B-int LTR MaLR -820 551 1 1596 188 48 10 chr2 2512011 2512383 -250744200 - MLT1B LTR MaLR 0 467 1 509 239 5 0 chr2 2512397 2512620 -250743963 + (TG)n Simple_repeat Simple_repeat 1 224 0 190 366 46 7 chr2 2512647 2512800 -250743783 - L2 LINE L2 -1364 1950 1792 252 243 14 0 chr2 2513432 2513506 -250743077 + HAL1 LINE L1 2322 2396 -111 208 254 42 14 chr2 2514935 2515006 -250741577 + L3 LINE CR1 1349 1421 -156 214 356 57 26 chr2 2515420 2515614 -250740969 + L3 LINE CR1 1244 1443 -134 311 282 36 45 chr2 2516066 2516176 -250740407 + MIR SINE MIR 38 146 -62 425 315 56 28 chr2 2516745 2516923 -250739660 - MIR SINE MIR -6 256 74 780 271 199 14 chr2 2517031 2517448 -250739135 + MLT1D LTR MaLR 2 495 -10 295 302 232 23 chr2 2517508 2517978 -250738605 + L2 LINE L2 2172 2739 -575 743 203 96 12 chr2 2518334 2518642 -250737941 + MSTD LTR MaLR 6 395 -1 294 293 95 26 chr2 2518645 2518761 -250737822 + L2 LINE L2 3188 3311 -2 337 356 10 0 chr2 2518788 2518892 -250737691 - MIR SINE MIR -99 163 59 701 329 109 22 chr2 2519568 2520064 -250736519 - MLT1G LTR MaLR 0 590 52 1905 181 35 46 chr2 2520126 2520557 -250736026 - MSTC LTR MaLR 0 428 3 1373 197 30 10 chr2 2520583 2520878 -250735705 - MLT1B LTR MaLR -19 371 71 210 184 20 0 chr2 2524251 2524300 -250732283 + (CA)n Simple_repeat Simple_repeat 1 50 0 189 365 90 23 chr2 2526059 2526325 -250730258 - L2 LINE L2 -788 2526 2243 294 95 0 0 chr2 2526408 2526450 -250730133 + (GA)n Simple_repeat Simple_repeat 1 42 0 429 54 0 0 chr2 2526734 2526790 -250729793 + (TGGA)n Simple_repeat Simple_repeat 2 57 0 266 316 0 0 chr2 2527046 2527125 -250729458 + (CA)n Simple_repeat Simple_repeat 2 80 0 659 209 47 29 chr2 2528991 2529163 -250727420 + MLT1A1 LTR MaLR 1 175 -190 2403 239 38 63 chr2 2529177 2530125 -250726458 + MLT1A1-int LTR MaLR 124 1118 -617 1237 212 141 96 chr2 2530118 2530566 -250726017 + MLT1A1-int LTR MaLR 1268 1735 0 * 823 231 5 39 chr2 2530566 2530769 -250725814 + MLT1A1 LTR MaLR 1 196 -169 964 221 20 0 chr2 2530787 2530986 -250725597 + MLT1A1 LTR MaLR 161 363 -2 1880 121 82 25 chr2 2532265 2532620 -250723963 - THE1C LTR MaLR 0 375 1 420 72 40 59 chr2 2535020 2535172 -250721411 + (CA)n Simple_repeat Simple_repeat 2 150 0 201 184 48 39 chr2 2535175 2535278 -250721305 + (CACAC)n Simple_repeat Simple_repeat 4 107 0 268 103 52 31 chr2 2535281 2535378 -250721205 + (CA)n Simple_repeat Simple_repeat 1 99 0 207 213 0 21 chr2 2535588 2535635 -250720948 + CT-rich Low_complexity Low_complexity 1 46 0 412 198 16 59 chr2 2535786 2536060 -250720523 + GA-rich Low_complexity Low_complexity 1 262 0 200 237 68 0 chr2 2536384 2536443 -250720140 + CT-rich Low_complexity Low_complexity 4 66 0 238 253 0 111 chr2 2536531 2536630 -250719953 + MER94 DNA DNA 30 117 -17 193 354 21 10 chr2 2538320 2538416 -250718167 + L2 LINE L2 2666 2762 -552 933 257 41 55 chr2 2538653 2539019 -250717564 + MLT1B LTR MaLR 5 365 -25 577 205 22 6 chr2 2539291 2539822 -250716761 + (CA)n Simple_repeat Simple_repeat 1 539 0 254 159 0 79 chr2 2539822 2539885 -250716698 - MER4-int LTR ERV1 -5432 1166 1109 268 176 29 0 chr2 2539895 2539963 -250716620 + (CA)n Simple_repeat Simple_repeat 2 71 0 301 298 33 58 chr2 2539963 2540084 -250716499 - L1MC4 LINE L1 -1337 6705 6588 359 260 18 11 chr2 2540119 2540405 -250716178 + (CA)n Simple_repeat Simple_repeat 1 288 0 271 195 183 0 chr2 2542170 2542252 -250714331 + MIR SINE MIR 61 157 -105 528 366 32 35 chr2 2542468 2542930 -250713653 + L2 LINE L2 2156 2616 -698 22 0 0 0 chr2 2543091 2543113 -250713470 + AT_rich Low_complexity Low_complexity 1 22 0 531 0 0 0 chr2 2543621 2543680 -250712903 + (TA)n Simple_repeat Simple_repeat 1 59 0 270 88 35 53 chr2 2543680 2543737 -250712846 + LTR33A LTR ERVL 450 505 -18 23 0 0 0 chr2 2544355 2544378 -250712205 + AT_rich Low_complexity Low_complexity 1 23 0 463 335 11 47 chr2 2545017 2545208 -250711375 + L1ME4a LINE L1 5731 5914 -207 270 300 47 0 chr2 2545218 2545368 -250711215 + L1ME4a LINE L1 5956 6112 -9 572 306 40 76 chr2 2545726 2546147 -250710436 + L2 LINE L2 2127 2532 -782 184 333 0 0 chr2 2546248 2546302 -250710281 - MIR SINE MIR -128 134 81 275 303 11 22 chr2 2547582 2547760 -250708823 + (TGAG)n Simple_repeat Simple_repeat 4 179 0 388 223 54 18 chr2 2550548 2550660 -250705923 - MIR3 SINE MIR 0 208 93 413 286 104 16 chr2 2550830 2551022 -250705561 - MIR SINE MIR -48 214 6 3795 122 23 28 chr2 2551210 2551810 -250704773 + MER4A LTR ERV1 1 597 -3 251 179 45 143 chr2 2552991 2553103 -250703480 - MLT1L LTR MaLR -220 395 295 520 238 41 8 chr2 2555343 2555465 -250701118 - MIR SINE MIR -70 192 67 326 262 0 36 chr2 2555542 2555626 -250700957 - MIR SINE MIR -29 233 153 1152 269 97 3 chr2 2555699 2556121 -250700462 + L1ME1 LINE L1 5717 6334 0 273 375 26 7 chr2 2557066 2557218 -250699365 - MIR SINE MIR -50 212 58 186 247 129 54 chr2 2557230 2557323 -250699260 - MIR SINE MIR -3 259 160 282 242 60 100 chr2 2557328 2557621 -250698962 + MLT1I LTR MaLR 1 269 -140 266 279 0 0 chr2 2558358 2558419 -250698164 + L2 LINE L2 3208 3268 -4 277 293 105 11 chr2 2559042 2559223 -250697360 + MLT1J1 LTR MaLR 1 198 -248 296 260 115 29 chr2 2559263 2559367 -250697216 + MLT1J2 LTR MaLR 291 403 -47 499 261 210 5 chr2 2559393 2559820 -250696763 + L2 LINE L2 2696 3217 -96 555 173 0 0 chr2 2559829 2559997 -250696586 + (TG)n Simple_repeat Simple_repeat 2 169 0 398 266 0 0 chr2 2559997 2560091 -250696492 + L2 LINE L2 3218 3311 -2 288 137 0 0 chr2 2560871 2560922 -250695661 + (T)n Simple_repeat Simple_repeat 1 51 0 274 239 28 0 chr2 2562272 2562343 -250694240 - L1MA6 LINE L1 -167 6133 6061 2779 194 224 67 chr2 2564763 2565643 -250690940 - LTR28 LTR ERV1 -2 1018 1 199 261 92 0 chr2 2566166 2566231 -250690352 - L2 LINE L2 -10 3303 3233 273 152 0 0 chr2 2568405 2568451 -250688132 + U6 snRNA snRNA 62 107 0 2054 123 3 0 chr2 2568632 2568925 -250687658 - AluSp SINE Alu -19 294 1 371 304 43 46 chr2 2569207 2569552 -250687031 - L1ME LINE L1 -561 5601 5258 588 370 61 26 chr2 2569574 2570134 -250686449 - L1ME LINE L1 -922 5224 4640 1660 169 21 17 chr2 2570135 2570432 -250686151 - AluJo SINE Alu -26 286 1 1171 151 47 0 chr2 2570445 2570657 -250685926 - L1M2 LINE L1 -647 5644 5423 860 211 0 0 chr2 2570652 2570818 -250685765 + L1M2 LINE L1 5628 5793 -507 * 437 187 0 37 chr2 2570818 2571005 -250685578 + (TA)n Simple_repeat Simple_repeat 1 180 0 568 161 4 35 chr2 2571016 2571278 -250685305 + (TA)n Simple_repeat Simple_repeat 1 253 0 317 309 73 20 chr2 2571307 2571553 -250685030 + L1MC3 LINE L1 5750 6008 -1777 * 2385 128 39 25 chr2 2571339 2571770 -250684813 + L1MA8 LINE L1 5782 6218 -73 300 286 86 37 chr2 2571781 2572026 -250684557 - L1ME LINE L1 -1503 4643 4387 1625 180 32 18 chr2 2572085 2572392 -250684191 + AluSx SINE Alu 1 311 0 477 311 70 31 chr2 2572403 2572544 -250684039 + MIR SINE MIR 1 156 -106 1818 189 36 3 chr2 2572544 2572877 -250683706 - MER7A DNA MER2_type -1 345 4 477 311 70 31 chr2 2572877 2572963 -250683620 + MIR SINE MIR 156 237 -25 1712 236 17 48 chr2 2573658 2574140 -250682443 - MLT1C LTR MaLR 0 467 1 299 352 34 11 chr2 2574368 2574544 -250682039 - MIR SINE MIR -36 226 47 309 303 32 50 chr2 2577223 2577444 -250679139 - L2 LINE L2 -15 3298 3082 254 332 114 15 chr2 2577608 2577942 -250678641 - L2 LINE L2 -559 2755 2389 2546 163 19 26 chr2 2578211 2578565 -250678018 - MSTB LTR MaLR 0 426 74 2381 98 0 0 chr2 2578565 2578870 -250677713 - AluSg SINE Alu -5 305 1 2546 163 19 26 chr2 2578870 2578944 -250677639 - MSTB LTR MaLR -352 74 1 199 373 20 51 chr2 2579233 2579488 -250677095 + L2 LINE L2 2601 2847 -467 849 207 78 132 chr2 2580628 2580868 -250675715 - MLT1A1 LTR MaLR 0 365 113 1960 81 16 0 chr2 2580868 2581116 -250675467 + AluSp SINE Alu 44 295 -18 849 207 78 132 chr2 2581116 2581177 -250675406 - MLT1A1 LTR MaLR -252 113 87 2134 119 10 3 chr2 2581177 2581479 -250675104 - AluSg SINE Alu -6 304 1 849 207 78 132 chr2 2581479 2581562 -250675021 - MLT1A1 LTR MaLR -278 87 1 1561 273 127 25 chr2 2581751 2582443 -250674140 - L1MC4 LINE L1 -87 7955 7193 241 338 50 12 chr2 2582539 2582699 -250673884 - MIR SINE MIR -12 250 85 2270 155 22 28 chr2 2582701 2583158 -250673425 - MSTB2 LTR MaLR -3 454 1 32 0 0 0 chr2 2583792 2583824 -250672759 + AT_rich Low_complexity Low_complexity 1 32 0 2232 120 10 0 chr2 2584188 2584487 -250672096 + AluSx SINE Alu 1 302 -10 186 222 0 0 chr2 2585287 2585341 -250671242 + A-rich Low_complexity Low_complexity 1 54 0 1172 220 97 61 chr2 2585370 2585815 -250670768 + MER101 LTR ERV1 5 465 -9 316 280 33 40 chr2 2585839 2585989 -250670594 + L1ME LINE L1 2926 3074 -3072 415 269 17 29 chr2 2586329 2586504 -250670079 + L1ME LINE L1 5574 5746 -375 3880 164 28 17 chr2 2586527 2587241 -250669342 + MER72 LTR ERV1 1 722 0 219 323 91 0 chr2 2587738 2587837 -250668746 - MIR SINE MIR -63 145 38 283 261 72 36 chr2 2589720 2589831 -250666752 + L2 LINE L2 3125 3239 -33 193 196 22 0 chr2 2590113 2590159 -250666424 + L2 LINE L2 3262 3308 -5 217 273 30 0 chr2 2590271 2590337 -250666246 + MIR SINE MIR 86 153 -109 293 265 15 0 chr2 2590421 2590489 -250666094 - L2 LINE L2 0 3313 3245 495 329 111 19 chr2 2590731 2591047 -250665536 - L2 LINE L2 -18 3254 2910 187 344 66 33 chr2 2592198 2592307 -250664276 + MIR SINE MIR 93 210 -52 2329 81 13 3 chr2 2592307 2592617 -250663966 + AluSq SINE Alu 1 313 0 187 344 66 33 chr2 2592617 2592658 -250663925 + MIR SINE MIR 210 248 -14 397 186 0 72 chr2 2593277 2593470 -250663113 + C-rich Low_complexity Low_complexity 2 180 0 467 272 35 0 chr2 2593487 2593660 -250662923 + C-rich Low_complexity Low_complexity 2 180 0 365 314 0 0 chr2 2593673 2593848 -250662735 + (CACCC)n Simple_repeat Simple_repeat 4 178 0 2156 113 0 0 chr2 2595277 2595559 -250661024 + AluSx SINE Alu 3 284 -28 754 240 134 55 chr2 2597270 2597636 -250658947 - MSTD LTR MaLR -1 395 1 278 304 21 29 chr2 2597669 2597821 -250658762 - MIR SINE MIR -67 141 3 2127 89 0 4 chr2 2598117 2598388 -250658195 + AluSc SINE Alu 25 294 -15 528 105 26 0 chr2 2599208 2599326 -250657257 + AluSg/x SINE Alu 201 320 0 27 29 0 0 chr2 2599999 2600033 -250656550 + AT_rich Low_complexity Low_complexity 1 34 0 248 285 36 67 chr2 2601376 2601541 -250655042 - L2 LINE L2 -1 3312 3153 312 339 23 8 chr2 2601644 2601774 -250654809 + L2 LINE L2 3137 3268 -4 4494 187 55 23 chr2 2601778 2602751 -250653832 - L1MA9 LINE L1 -38 6274 5270 2118 217 70 2 chr2 2602750 2603248 -250653335 + L1MA9 LINE L1 4728 5259 -887 * 2126 144 0 3 chr2 2603911 2604216 -250652367 - AluJb SINE Alu -6 306 3 485 224 63 29 chr2 2607088 2607262 -250649321 - MER104 DNA MER2_type 0 180 1 361 252 112 65 chr2 2608376 2608654 -250647929 + L1MC5 LINE L1 7626 7916 -45 2526 72 0 0 chr2 2609219 2609526 -250647057 + AluY SINE Alu 1 307 -4 333 265 8 98 chr2 2609542 2609674 -250646909 + L1ME4a LINE L1 5580 5699 -422 386 218 0 0 chr2 2609711 2609789 -250646794 + L1ME4a LINE L1 5784 5861 -260 2167 128 0 3 chr2 2609888 2610185 -250646398 + AluSg SINE Alu 3 298 -12 4629 208 49 36 chr2 2610270 2611968 -250644615 - L1MC2 LINE L1 -8 6754 5038 1789 174 0 10 chr2 2611968 2612261 -250644322 + AluJo SINE Alu 10 299 -13 4629 208 49 36 chr2 2612261 2612413 -250644170 - L1MC2 LINE L1 -1724 5038 4890 4965 229 70 87 chr2 2612426 2612489 -250644094 - L1MC2 LINE L1 -2113 4451 4388 2068 164 44 29 chr2 2612489 2612873 -250643710 + MLT1B LTR MaLR 1 390 0 4965 229 70 87 chr2 2612873 2613521 -250643062 - L1MC2 LINE L1 -2176 4388 3731 216 0 0 0 chr2 2613521 2613545 -250643038 + (TC)n Simple_repeat Simple_repeat 2 25 0 4965 229 70 87 chr2 2613545 2613650 -250642933 - L1MC2 LINE L1 -2833 3731 3626 721 284 0 0 chr2 2613650 2613819 -250642764 + MER6B DNA MER2_type 2 170 -40 4965 229 70 87 chr2 2613819 2615523 -250641060 - L1MC2 LINE L1 -2938 3626 1787 2892 194 29 23 chr2 2615526 2615677 -250640906 - L1MC2 LINE L1 -4852 1193 1044 2595 115 3 13 chr2 2615677 2616052 -250640531 + THE1C LTR MaLR 1 371 -4 2892 194 29 23 chr2 2616052 2616922 -250639661 - L1MC2 LINE L1 -5001 1044 517 193 138 52 52 chr2 2617626 2617684 -250638899 - MIR SINE MIR -65 143 86 348 174 101 18 chr2 2618211 2618320 -250638263 - ORSL DNA AcHobo -91 184 67 297 274 0 0 chr2 2619497 2619592 -250636991 + (TG)n Simple_repeat Simple_repeat 2 96 0 26 30 0 0 chr2 2619838 2619871 -250636712 + AT_rich Low_complexity Low_complexity 1 33 0 231 114 0 0 chr2 2619958 2619993 -250636590 + (A)n Simple_repeat Simple_repeat 1 35 0 2105 143 55 62 chr2 2621574 2622007 -250634576 - Tigger2a DNA MER2_type -4 430 1 180 315 54 9 chr2 2622088 2622199 -250634384 - MIR3 SINE MIR -31 177 62 2191 132 0 0 chr2 2624451 2624740 -250631843 - AluSx SINE Alu -23 289 1 316 275 148 0 chr2 2626547 2626689 -250629894 + MER45C DNA AcHobo 1 163 -790 330 281 43 49 chr2 2626865 2627050 -250629533 + MER45C DNA AcHobo 461 644 -309 1308 234 38 0 chr2 2627399 2627715 -250628868 + MER45B DNA AcHobo 713 1040 0 956 264 126 42 chr2 2629582 2630036 -250626547 + HAL1 LINE L1 597 1088 -1419 2182 127 0 0 chr2 2630036 2630335 -250626248 + AluSx SINE Alu 1 299 -13 505 298 104 31 chr2 2630347 2630703 -250625880 + L1MCc LINE L1 24 405 -6018 1725 258 131 47 chr2 2630857 2631556 -250625027 + L1MCc LINE L1 807 1446 -5495 1732 167 17 10 chr2 2631556 2631844 -250624739 + AluJb SINE Alu 7 296 -16 1725 258 131 47 chr2 2631844 2632888 -250623695 + L1MCc LINE L1 1446 2720 -4221 266 71 0 24 chr2 2632888 2632930 -250623653 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 1725 258 131 47 chr2 2632930 2632964 -250623619 + L1MCc LINE L1 2720 2750 -4191 488 221 25 16 chr2 2632989 2633111 -250623472 + L1ME3A LINE L1 29 151 -6245 305 291 112 50 chr2 2633128 2633482 -250623101 + MLT1J1 LTR MaLR 6 343 -103 491 155 78 6 chr2 2634091 2634420 -250622163 + (TAGA)n Simple_repeat Simple_repeat 1 352 0 208 264 57 75 chr2 2634434 2634556 -250622027 + MIR SINE MIR 2 121 -87 185 290 210 0 chr2 2635024 2635124 -250621459 - L2 LINE L2 -2 3270 3150 254 58 0 135 chr2 2637110 2637162 -250619421 - L2 LINE L2 -5 3267 3223 26 0 0 0 chr2 2638371 2638397 -250618186 + AT_rich Low_complexity Low_complexity 1 26 0 396 59 0 0 chr2 2639056 2639107 -250617476 + (CA)n Simple_repeat Simple_repeat 2 52 0 282 123 0 0 chr2 2639221 2639278 -250617305 + (CAGA)n Simple_repeat Simple_repeat 2 58 0 188 319 72 0 chr2 2639333 2639402 -250617181 - MIR SINE MIR -61 147 74 2455 255 98 55 chr2 2640579 2640776 -250615807 + L1ME3A LINE L1 1230 1417 -4824 985 295 144 17 chr2 2640776 2641352 -250615231 - MLT1E1 LTR MaLR -1 653 5 2455 255 98 55 chr2 2641352 2643932 -250612651 + L1ME3A LINE L1 1417 4295 -1946 1813 151 141 26 chr2 2643932 2644316 -250612267 - MSTA LTR MaLR 0 428 1 2455 255 98 55 chr2 2644316 2646341 -250610242 + L1ME3A LINE L1 4295 6232 -9 1164 170 58 145 chr2 2646423 2646823 -250609760 - MLT1A1 LTR MaLR 0 365 1 21 0 0 0 chr2 2648951 2648972 -250607611 + AT_rich Low_complexity Low_complexity 1 21 0 2283 103 3 0 chr2 2648975 2649267 -250607316 + AluSq SINE Alu 1 293 -20 5117 121 56 39 chr2 2650413 2652054 -250604529 + L1PA16 LINE L1 4495 6166 0 310 292 46 8 chr2 2652109 2652239 -250604344 + MIR3 SINE MIR 74 208 0 40 37 0 0 chr2 2652244 2652298 -250604285 + AT_rich Low_complexity Low_complexity 1 54 0 561 249 60 2 chr2 2652575 2652764 -250603819 - MIR SINE MIR -50 212 15 195 372 78 35 chr2 2654121 2654492 -250602091 - L2 LINE L2 -603 2711 2325 1043 177 36 64 chr2 2654538 2654758 -250601825 + AluJo SINE Alu 68 281 -31 4222 145 21 39 chr2 2654762 2654889 -250601694 + L1MA7 LINE L1 5484 5612 -679 2130 122 0 44 chr2 2654889 2655208 -250601375 + AluSx SINE Alu 5 309 -3 4222 145 21 39 chr2 2655208 2655903 -250600680 + L1MA7 LINE L1 5612 6291 0 392 88 81 0 chr2 2656052 2656132 -250600451 - L1MB1 LINE L1 -1 6167 6098 5309 79 11 4 chr2 2656165 2656524 -250600059 - L1PB1 LINE L1 -2 6149 5794 414 0 0 0 chr2 2656524 2656570 -250600013 + (TG)n Simple_repeat Simple_repeat 2 47 0 5309 79 11 4 chr2 2656570 2656931 -250599652 - L1PB1 LINE L1 -357 5794 5424 307 327 35 7 chr2 2657070 2657280 -250599303 + MIR SINE MIR 5 218 -44 1162 220 112 67 chr2 2657284 2657739 -250598844 - MLT1H LTR MaLR -1 548 22 358 300 91 28 chr2 2658376 2658629 -250597954 + MLT1J LTR MaLR 236 504 -7 495 213 148 41 chr2 2659247 2659491 -250597092 + HAL1b LINE L1 726 995 -353 261 182 18 0 chr2 2659672 2659727 -250596856 - MLT2B1 LTR ERVL 0 520 465 183 80 0 0 chr2 2659731 2659756 -250596827 + (CATATA)n Simple_repeat Simple_repeat 2 26 0 898 214 147 136 chr2 2659810 2660170 -250596413 - MLT2B1 LTR ERVL -50 364 1 2340 99 0 3 chr2 2663208 2663502 -250593081 - AluSx SINE Alu -19 293 1 258 173 0 0 chr2 2663533 2663585 -250592998 - L1MB8 LINE L1 -14 6164 6113 * 5933 193 25 12 chr2 2663582 2665324 -250591259 + L1M2 LINE L1 4027 5787 -525 12666 175 51 24 chr2 2665325 2667801 -250588782 + L1P2 LINE L1 2251 4660 -1494 343 67 0 0 chr2 2667801 2667846 -250588737 + MADE1 DNA Mariner 1 45 -35 12666 175 51 24 chr2 2667846 2668121 -250588462 + L1P2 LINE L1 4660 4926 -1228 3403 46 0 5 chr2 2668121 2668538 -250588045 - L1PA5 LINE L1 -2 6152 5738 12666 175 51 24 chr2 2668538 2669132 -250587451 + L1PA5 LINE L1 4926 5733 -421 3230 147 28 9 chr2 2669110 2669887 -250586696 + L1PB4 LINE L1 4988 5775 -381 * 297 0 0 0 chr2 2669887 2669920 -250586663 + (TA)n Simple_repeat Simple_repeat 2 34 0 1392 158 41 142 chr2 2670234 2670330 -250586253 + L1PB4 LINE L1 5782 5886 -270 326 89 0 0 chr2 2670330 2670375 -250586208 + MADE1 DNA Mariner 35 79 -1 1392 158 41 142 chr2 2670375 2670651 -250585932 + L1PB4 LINE L1 5886 6156 0 2813 152 16 4 chr2 2670693 2671550 -250585033 + L1P4 LINE L1 4828 5692 -473 1729 175 10 0 chr2 2671553 2671845 -250584738 + AluJb SINE Alu 1 295 -17 210 267 0 0 chr2 2672335 2672380 -250584203 + (TATG)n Simple_repeat Simple_repeat 1 45 0 345 253 114 98 chr2 2673408 2673468 -250583115 + L1MEc LINE L1 1689 1747 -4974 2484 59 3 7 chr2 2673468 2673772 -250582811 + AluY SINE Alu 1 303 -8 345 253 114 98 chr2 2673772 2674098 -250582485 + L1MEc LINE L1 1747 2081 -4640 2052 200 42 9 chr2 2674133 2674563 -250582020 + LTR56 LTR ERV1 1 444 -1 385 307 111 42 chr2 2674810 2675200 -250581383 + L1MEc LINE L1 2345 2804 -3917 51 65 0 0 chr2 2675911 2676004 -250580579 + AT_rich Low_complexity Low_complexity 1 93 0 21 57 0 0 chr2 2676253 2676288 -250580295 + AT_rich Low_complexity Low_complexity 1 35 0 251 280 40 0 chr2 2676380 2676455 -250580128 + Tigger6 DNA MER2_type 1 78 -1519 264 242 0 77 chr2 2678146 2678237 -250578346 - L1MC4 LINE L1 -1341 6701 6618 1166 128 6 17 chr2 2678260 2678440 -250578143 + AluSg/x SINE Alu 135 312 0 2330 86 0 10 chr2 2678753 2679055 -250577528 - AluY SINE Alu -12 299 1 42 65 0 0 chr2 2679238 2679315 -250577268 + AT_rich Low_complexity Low_complexity 1 77 0 185 164 0 36 chr2 2680138 2680193 -250576390 + (TTA)n Simple_repeat Simple_repeat 2 54 0 200 264 83 0 chr2 2680850 2680922 -250575661 + MIR SINE MIR 127 204 -58 2208 141 141 5 chr2 2681007 2681383 -250575200 - MSTA LTR MaLR 0 428 2 1530 274 86 89 chr2 2681437 2683119 -250573464 - HAL1 LINE L1 0 2507 830 309 169 0 0 chr2 2683130 2683189 -250573394 + (TCCA)n Simple_repeat Simple_repeat 2 60 0 1955 184 46 90 chr2 2683189 2683689 -250572894 + MLT2B1 LTR ERVL 2 479 -41 218 202 40 40 chr2 2683689 2683786 -250572797 + (TA)n Simple_repeat Simple_repeat 2 101 -24 1326 168 26 17 chr2 2683786 2684018 -250572565 - MER46A DNA MER2_type 0 236 3 218 202 40 40 chr2 2684018 2684044 -250572539 + (TA)n Simple_repeat Simple_repeat 100 125 0 1401 59 0 0 chr2 2684097 2684267 -250572316 + LTR9 LTR ERV1 3 172 -440 340 229 0 62 chr2 2684269 2684365 -250572218 + L1MC4 LINE L1 6614 6703 -1339 469 184 0 15 chr2 2684370 2684506 -250572077 + (TA)n Simple_repeat Simple_repeat 2 135 0 247 269 0 21 chr2 2684507 2684600 -250571983 + L1MC4 LINE L1 6613 6703 -1339 345 198 0 0 chr2 2684602 2684688 -250571895 + (TA)n Simple_repeat Simple_repeat 2 87 0 241 194 45 0 chr2 2684691 2684758 -250571825 + L1MCa LINE L1 1994 2063 -4363 233 238 71 12 chr2 2684785 2684869 -250571714 - L1MC4 LINE L1 -1333 6709 6621 217 214 0 0 chr2 2684880 2684956 -250571627 + (TG)n Simple_repeat Simple_repeat 1 76 0 260 61 0 0 chr2 2684966 2684999 -250571584 + MLT2C1 LTR ERVL 360 392 -5 224 167 21 0 chr2 2685008 2685056 -250571527 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 3762 149 28 12 chr2 2685177 2685779 -250570804 - LTR9 LTR ERV1 0 612 1 244 273 79 43 chr2 2686202 2686341 -250570242 - HAL1 LINE L1 -2363 144 1 2060 121 0 23 chr2 2686716 2687022 -250569561 - AluSx SINE Alu -13 299 1 244 294 98 21 chr2 2688018 2688161 -250568422 - MER103 DNA DNA -2 164 11 207 333 23 0 chr2 2688390 2688477 -250568106 + CT-rich Low_complexity Low_complexity 2 90 0 2032 123 13 13 chr2 2688628 2688938 -250567645 + L1PA13 LINE L1 5546 5855 -308 1328 229 14 8 chr2 2688926 2689297 -250567286 + L1MCa LINE L1 3104 3476 -2950 * 5182 133 3 1 chr2 2689296 2690701 -250565882 + L1PA12 LINE L1 4577 5984 -184 2095 170 25 0 chr2 2690701 2691065 -250565518 - L1M4 LINE L1 -483 5701 5329 1435 73 28 0 chr2 2691071 2691249 -250565334 + L1PA12 LINE L1 5985 6167 -1 2836 92 20 52 chr2 2691315 2691759 -250564824 - L1PB1 LINE L1 -3 6148 5719 3849 197 33 19 chr2 2691870 2692883 -250563700 + L1MB7 LINE L1 5102 6126 -58 1176 247 42 3 chr2 2692897 2693209 -250563374 - L1MA9 LINE L1 -38 6274 5951 2786 175 7 2 chr2 2693217 2693663 -250562920 - L1PA16 LINE L1 -4 6162 5715 616 259 114 71 chr2 2693862 2694484 -250562099 + L1M4 LINE L1 3681 4329 -1817 422 257 84 48 chr2 2694537 2694786 -250561797 + L1MC4 LINE L1 6914 7171 -871 1134 237 3 61 chr2 2694797 2695109 -250561474 + L1MA5 LINE L1 1 294 -6915 306 325 9 0 chr2 2696056 2696170 -250560413 - MER94 DNA DNA -19 115 1 233 271 76 34 chr2 2696509 2696627 -250559956 + MIR SINE MIR 106 228 -34 335 193 0 0 chr2 2697679 2697736 -250558847 - L2 LINE L2 -9 3304 3248 414 296 0 7 chr2 2698121 2698424 -250558159 + (CA)n Simple_repeat Simple_repeat 1 300 0 437 328 0 11 chr2 2698437 2698614 -250557969 + (CA)n Simple_repeat Simple_repeat 1 175 0 10308 204 34 60 chr2 2699445 2700895 -250555688 + L1MA5 LINE L1 390 1877 -5485 2179 123 6 25 chr2 2700895 2701213 -250555370 - AluSx SINE Alu 0 312 1 10308 204 34 60 chr2 2701213 2704958 -250551625 + L1MA5 LINE L1 1877 5720 -1642 481 50 0 200 chr2 2704958 2705058 -250551525 - MADE1 DNA Mariner 0 80 1 10308 204 34 60 chr2 2705058 2706017 -250550566 + L1MA5 LINE L1 5720 7113 -249 286 51 26 0 chr2 2706017 2706056 -250550527 + MADE1 DNA Mariner 1 40 -40 10308 204 34 60 chr2 2706056 2706152 -250550431 + L1MA5 LINE L1 7113 7210 -152 4971 62 8 8 chr2 2706154 2706765 -250549818 - L1PA7 LINE L1 -1 6153 5543 967 172 0 0 chr2 2706765 2706933 -250549650 + L1MA5 LINE L1 7194 7362 0 721 412 71 10 chr2 2706934 2707444 -250549139 + L1MC4a LINE L1 7116 7607 -201 272 303 107 8 chr2 2707625 2707747 -250548836 - MIR SINE MIR -37 225 92 562 211 45 39 chr2 2708007 2708163 -250548420 + MLT1D LTR MaLR 14 170 -335 1036 153 178 4 chr2 2708533 2708613 -250547970 - L1MC2 LINE L1 -11 6333 6268 180 0 0 0 chr2 2708613 2708633 -250547950 + (CA)n Simple_repeat Simple_repeat 1 20 0 1036 153 178 4 chr2 2708633 2708788 -250547795 - L1MC2 LINE L1 -76 6268 6057 2069 125 7 3 chr2 2708801 2709090 -250547493 - AluSx SINE Alu -21 291 2 2438 187 17 15 chr2 2713570 2714031 -250542552 + MLT1C LTR MaLR 6 467 0 403 57 19 0 chr2 2714621 2714674 -250541909 - L1PA6 LINE L1 -5 6149 6096 3233 35 0 0 chr2 2714674 2715260 -250541323 + L1P2 LINE L1 4999 5584 -570 635 250 95 20 chr2 2715261 2715461 -250541122 - MIR SINE MIR -39 223 9 1984 142 14 3 chr2 2715614 2715909 -250540674 - AluSx SINE Alu -14 298 1 190 344 73 21 chr2 2716200 2716296 -250540287 - L2 LINE L2 -6 3307 3207 * 432 298 116 30 chr2 2716293 2716491 -250540092 + MIR SINE MIR 5 219 -43 5030 215 66 25 chr2 2716517 2718274 -250538309 + L1MDa LINE L1 21 2004 -4536 1550 77 9 18 chr2 2718273 2718495 -250538088 + L1P LINE L1 1 220 -5926 * 192 191 95 0 chr2 2920312 2920375 -250336208 + L2 LINE L2 3238 3306 -7 2714 37 0 0 chr2 2921639 2921937 -250334646 - AluY SINE Alu -13 298 1 305 203 40 0 chr2 2921938 2922012 -250334571 - MER69 DNA AcHobo -2370 156 80 27 0 0 0 chr2 2922478 2922505 -250334078 + AT_rich Low_complexity Low_complexity 1 27 0 624 168 19 0 chr2 2923023 2923130 -250333453 - FLAM_C SINE Alu -33 110 2 382 298 21 47 chr2 2923778 2923969 -250332614 + MER3 DNA MER1_type 24 209 0 313 323 168 0 chr2 2923986 2924141 -250332442 + MER5A DNA MER1_type 6 186 -3 189 306 72 39 chr2 2925821 2926001 -250330582 + L2 LINE L2 3083 3268 -4 * 202 289 0 19 chr2 2925991 2926043 -250330540 + MER5A DNA MER1_type 137 187 -2 1335 220 18 23 chr2 2927217 2927577 -250329006 - MLT1F LTR MaLR -81 461 15 437 335 24 0 chr2 2927594 2927758 -250328825 - MLT1F LTR MaLR -365 177 10 190 288 0 30 chr2 2927853 2927919 -250328664 - L2 LINE L2 -10 3262 3199 323 294 122 25 chr2 2928153 2928596 -250327987 - MLT1E LTR MaLR 0 593 35 1011 149 0 0 chr2 2928718 2928859 -250327724 - FRAM SINE Alu -17 159 19 356 321 26 75 chr2 2928983 2929070 -250327513 - L2 LINE L2 -61 3252 3162 2410 75 0 0 chr2 2929070 2929352 -250327231 - AluSp SINE Alu -23 290 9 356 321 26 75 chr2 2929352 2929613 -250326970 - L2 LINE L2 -151 3162 2921 2459 97 0 0 chr2 2929862 2930171 -250326412 - AluSx SINE Alu -3 309 1 2329 102 0 16 chr2 2930350 2930487 -250326096 + AluSx SINE Alu 1 139 -173 2248 98 0 29 chr2 2930487 2930794 -250325789 + AluSg SINE Alu 1 298 -12 2329 102 0 16 chr2 2930794 2930969 -250325614 + AluSx SINE Alu 139 308 -4 498 289 165 14 chr2 2930976 2931340 -250325243 - L2 LINE L2 -770 2544 2126 927 154 46 6 chr2 2931815 2931990 -250324593 - MER20 DNA MER1_type -1 218 37 907 225 79 48 chr2 2932086 2932441 -250324142 + MER69 DNA AcHobo 1919 2284 -242 2327 98 3 13 chr2 2932448 2932755 -250323828 + AluY SINE Alu 1 304 -7 3246 226 66 19 chr2 2932799 2933319 -250323264 - L1MD1 LINE L1 0 6242 5748 1272 97 111 0 chr2 2933319 2933526 -250323057 - MER30 DNA MER1_type 0 230 1 3246 226 66 19 chr2 2933526 2933650 -250322933 - L1MD1 LINE L1 -494 5748 5631 2299 104 3 3 chr2 2933650 2933959 -250322624 - AluSc SINE Alu 0 309 1 3246 226 66 19 chr2 2933959 2934701 -250321882 - L1MD1 LINE L1 -611 5631 4789 2400 103 0 3 chr2 2935024 2935335 -250321248 - AluSq SINE Alu -3 310 1 764 173 0 0 chr2 2936127 2936260 -250320323 + FLAM_C SINE Alu 1 133 0 1916 176 0 3 chr2 2936944 2937122 -250319461 - AluJo SINE Alu 0 312 134 2441 92 0 0 chr2 2937122 2937416 -250319167 - AluSq SINE Alu -19 294 1 1916 176 0 3 chr2 2937416 2937550 -250319033 - AluJo SINE Alu -178 134 1 368 273 54 81 chr2 2938407 2938667 -250317916 - HAL1 LINE L1 -953 1554 1302 381 248 0 0 chr2 2939592 2939705 -250316878 + (CA)n Simple_repeat Simple_repeat 1 113 0 189 0 0 0 chr2 2939931 2939952 -250316631 + (TTTC)n Simple_repeat Simple_repeat 2 22 0 182 318 0 0 chr2 2940691 2940754 -250315829 - MIR SINE MIR -136 126 64 251 290 131 42 chr2 2940793 2940993 -250315590 + L1MC/D LINE L1 5600 5830 -1978 1918 155 17 3 chr2 2940993 2941289 -250315294 + AluJo SINE Alu 1 300 -12 251 290 131 42 chr2 2941289 2941347 -250315236 + L1MC/D LINE L1 5830 5881 -1927 197 231 0 15 chr2 2941466 2941531 -250315052 + (CATATA)n Simple_repeat Simple_repeat 1 64 0 1138 215 53 45 chr2 2941687 2942045 -250314538 - MLT1A1 LTR MaLR -4 361 1 1395 127 143 20 chr2 2942178 2942430 -250314153 - AluJo SINE Alu -29 283 1 2449 100 0 0 chr2 2942662 2942971 -250313612 - AluSx SINE Alu -3 309 1 224 276 188 33 chr2 2943366 2943547 -250313036 - MIR SINE MIR -16 246 38 197 292 156 0 chr2 2944762 2944858 -250311725 - MIR SINE MIR -79 183 73 272 252 44 74 chr2 2945396 2945531 -250311052 - MIR SINE MIR -62 146 16 1089 0 0 0 chr2 2946358 2946479 -250310104 + (CA)n Simple_repeat Simple_repeat 1 121 0 183 42 0 0 chr2 2946479 2946503 -250310080 + (CCCA)n Simple_repeat Simple_repeat 1 24 0 2325 208 60 19 chr2 2947839 2948259 -250308324 + MER6A DNA MER2_type -10 439 -426 2698 40 0 0 chr2 2948259 2948559 -250308024 + AluY SINE Alu 1 300 -11 2325 208 60 19 chr2 2948559 2948712 -250307871 + MER6A DNA MER2_type 439 584 -21 312 333 32 0 chr2 2948853 2948976 -250307607 - MIR SINE MIR -53 209 83 225 65 0 0 chr2 2950466 2950497 -250306086 + (TG)n Simple_repeat Simple_repeat 1 31 0 1459 205 59 38 chr2 2951358 2951890 -250304693 - LTR40a LTR ERVL 0 519 31 640 268 168 31 chr2 2952044 2952165 -250304418 + MLT1F1 LTR MaLR 1 104 -463 1679 180 40 30 chr2 2952165 2952593 -250303990 + MSTB1 LTR MaLR 1 432 0 640 268 168 31 chr2 2952593 2952959 -250303624 + MLT1F1 LTR MaLR 104 567 0 716 144 34 0 chr2 2952960 2953078 -250303505 + FLAM_A SINE Alu 1 122 -11 1985 155 0 29 chr2 2954635 2954945 -250301638 + AluJb SINE Alu 1 301 -11 2053 172 46 0 chr2 2956065 2956478 -250300105 + MSTB1 LTR MaLR 1 432 0 1899 198 96 24 chr2 2956551 2957062 -250299521 - LTR10A LTR ERV1 -61 548 1 232 263 95 73 chr2 2957093 2957230 -250299353 + MIR SINE MIR 14 153 -109 1032 278 89 47 chr2 2957801 2958399 -250298184 - MLT1E2 LTR MaLR 0 626 4 376 219 42 25 chr2 2958634 2958753 -250297830 - L1MA4A LINE L1 -1 6302 6182 626 233 8 0 chr2 2958789 2958922 -250297661 + MER58 DNA MER1_type 116 249 -92 3793 96 28 7 chr2 2959081 2959644 -250296939 + L1PA11 LINE L1 5600 6174 0 690 254 79 0 chr2 2959883 2960060 -250296523 + MER3 DNA MER1_type 3 193 -16 1973 167 3 3 chr2 2960650 2960955 -250295628 + AluJo SINE Alu 1 305 -7 23 33 0 0 chr2 2961059 2961089 -250295494 + AT_rich Low_complexity Low_complexity 1 30 0 3944 73 15 0 chr2 2961357 2961902 -250294681 - L1PA10 LINE L1 0 6168 5616 1259 267 44 16 chr2 2963353 2963784 -250292799 - LTR47B LTR ERVL 0 443 1 757 221 79 73 chr2 2964767 2965084 -250291499 + MER5C DNA MER1_type 5 323 -1 2524 32 0 0 chr2 2965368 2965677 -250290906 - AluY SINE Alu 0 310 2 3712 199 50 1 chr2 2966242 2966606 -250289977 - L1MB8 LINE L1 0 6178 5833 1265 125 83 5 chr2 2966606 2966822 -250289761 + MER46A DNA MER2_type 2 234 -2 3712 199 50 1 chr2 2966822 2967275 -250289308 - L1MB8 LINE L1 -345 5833 5320 2497 58 52 14 chr2 2967282 2967644 -250288939 - L1PB1 LINE L1 -7 7563 7188 730 93 0 19 chr2 2967660 2967768 -250288815 - L1MA2 LINE L1 -9 6295 6190 10321 156 34 21 chr2 2967770 2968109 -250288474 - L1PB1 LINE L1 -502 7217 6884 1244 124 180 141 chr2 2968109 2968520 -250288063 - MSTA LTR MaLR -1 427 1 10321 156 34 21 chr2 2968520 2970625 -250285958 - L1PB1 LINE L1 -835 6884 4738 5026 193 47 6 chr2 2971915 2973131 -250283452 - L1PB1 LINE L1 -2826 4739 3462 210 71 0 0 chr2 2973131 2973159 -250283424 + (CCCCCT)n Simple_repeat Simple_repeat 3 30 0 3676 71 4 21 chr2 2973264 2973824 -250282759 - SVA Other Other -835 551 2 3978 249 30 34 chr2 2973868 2974070 -250282513 - L1M4 LINE L1 -1426 4720 4519 1754 153 27 10 chr2 2974070 2974371 -250282212 - AluJb SINE Alu -4 308 3 3978 249 30 34 chr2 2974371 2974587 -250281996 - L1M4 LINE L1 -1627 4519 4304 2078 128 0 0 chr2 2974587 2974893 -250281690 - AluSx SINE Alu -6 306 1 3978 249 30 34 chr2 2974893 2975828 -250280755 - L1M4 LINE L1 -1842 4304 3371 609 165 75 75 chr2 2975852 2976064 -250280519 + MER69 DNA AcHobo 2312 2523 -3 1976 120 7 7 chr2 2977866 2978165 -250278418 - AluSx SINE Alu -13 299 1 270 141 0 179 chr2 2979409 2979434 -250277149 - MER45A DNA AcHobo -1447 134 106 2137 111 0 0 chr2 2979434 2979764 -250276819 - AluSq SINE Alu 0 313 1 270 141 0 179 chr2 2979764 2979816 -250276767 - MER45A DNA AcHobo -1475 106 71 260 319 43 49 chr2 2980562 2980725 -250275858 + MIR3 SINE MIR 6 167 -41 211 315 194 6 chr2 2981028 2981193 -250275390 - MIR SINE MIR -12 250 55 2212 95 0 0 chr2 2981482 2981786 -250274797 + AluY SINE Alu 1 304 -7 1501 163 4 4 chr2 2981801 2982059 -250274524 + AluJb SINE Alu 1 258 -54 356 182 71 50 chr2 2982340 2982439 -250274144 + L1MC5 LINE L1 7831 7931 -30 1705 159 27 3 chr2 2982820 2983115 -250273468 - AluJb SINE Alu -3 309 8 510 305 121 18 chr2 2983780 2984177 -250272406 + L2 LINE L2 2264 2701 -613 242 0 61 0 chr2 2984443 2984476 -250272107 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 281 273 39 0 chr2 2984501 2984578 -250272005 + L2 LINE L2 3232 3311 -2 211 204 0 56 chr2 2984738 2984792 -250271791 + CT-rich Low_complexity Low_complexity 6 56 0 2009 130 7 0 chr2 2984837 2985144 -250271439 - AluSx SINE Alu -3 309 1 324 284 39 0 chr2 2986097 2986199 -250270384 + MIR3 SINE MIR 96 201 -7 222 246 0 31 chr2 2986325 2986390 -250270193 - MIR SINE MIR -119 143 81 29 0 0 0 chr2 2986419 2986448 -250270135 + AT_rich Low_complexity Low_complexity 1 29 0 329 129 86 0 chr2 2986668 2986738 -250269845 - MER45A DNA AcHobo -22 156 81 219 293 7 30 chr2 2986824 2987112 -250269471 + G-rich Low_complexity Low_complexity 1 281 0 326 303 66 9 chr2 2987467 2987678 -250268905 - L1MEd LINE L1 -5306 813 591 24 67 0 0 chr2 2988975 2989020 -250267563 + AT_rich Low_complexity Low_complexity 1 45 0 237 178 0 0 chr2 2989113 2989158 -250267425 + (TG)n Simple_repeat Simple_repeat 2 46 0 345 270 72 18 chr2 2989399 2989510 -250267073 + MIR SINE MIR 28 144 -118 453 296 35 7 chr2 2990059 2990201 -250266382 + Charlie8 DNA MER1_type 25 170 -2247 191 329 114 27 chr2 2990714 2990863 -250265720 + MIR3 SINE MIR 15 176 -32 417 213 150 8 chr2 2991831 2991958 -250264625 + MIR SINE MIR 97 241 -21 199 365 12 0 chr2 2992421 2992506 -250264077 - MIR3 SINE MIR -18 190 105 412 54 36 0 chr2 2992716 2992772 -250263811 + L1P4 LINE L1 5423 5480 -688 2389 101 18 3 chr2 2992782 2993120 -250263463 - L1PA11 LINE L1 -2 6172 5830 3435 121 107 10 chr2 2993120 2993703 -250262880 - L1PA16 LINE L1 -67 6099 5460 3087 79 2 7 chr2 2993702 2994118 -250262465 + L1PA11 LINE L1 5467 5880 -294 * 279 270 149 29 chr2 2994201 2994375 -250262208 - L1ME LINE L1 -299 5822 5628 1419 142 130 15 chr2 2994970 2995231 -250261352 + AluJo SINE Alu 1 291 -21 188 330 66 22 chr2 2995589 2995680 -250260903 - MIR SINE MIR -65 143 49 295 280 0 30 chr2 2996213 2996313 -250260270 + L1ME LINE L1 5691 5787 -334 259 229 76 69 chr2 2996326 2996457 -250260126 + MIR SINE MIR 131 262 0 345 271 83 57 chr2 2997521 2997872 -250258711 - L1ME4a LINE L1 -21 6100 5741 271 295 54 0 chr2 2997877 2997989 -250258594 - L1ME4a LINE L1 -525 5596 5479 303 28 0 0 chr2 2998163 2998199 -250258384 + (TCCA)n Simple_repeat Simple_repeat 1 36 0 725 266 203 16 chr2 2998309 2998625 -250257958 - L2 LINE L2 -5 3308 2934 296 278 0 0 chr2 2998697 2998769 -250257814 - L2 LINE L2 -681 2633 2562 849 276 167 13 chr2 2998770 2999310 -250257273 - L2 LINE L2 -1123 2191 1569 1205 167 32 17 chr2 2999324 2999567 -250257016 - L1MB7 LINE L1 -218 5966 5721 604 355 108 33 chr2 2999608 3000770 -250255813 + L2 LINE L2 2005 3272 0 4590 192 43 24 chr2 3000921 3001600 -250254983 - L1M1 LINE L1 -4065 1263 599 1799 156 0 32 chr2 3001600 3001908 -250254675 - AluJb SINE Alu -14 298 1 4590 192 43 24 chr2 3001908 3002612 -250253971 - L1M1 LINE L1 -4729 599 727 1445 132 32 0 chr2 3002612 3002832 -250253751 + MER30 DNA MER1_type 3 229 -1 4590 192 43 24 chr2 3002832 3003141 -250253442 - L1M1 LINE L1 -4600 728 426 597 292 85 30 chr2 3003132 3003368 -250253215 - L1M4b LINE L1 -6296 563 315 * 857 197 82 52 chr2 3003391 3003624 -250252959 - L1M4b LINE L1 -6610 249 10 342 313 17 17 chr2 3003902 3004017 -250252566 + L2 LINE L2 3188 3302 -11 205 277 43 0 chr2 3004025 3004072 -250252511 - L2 LINE L2 -87 3185 3137 2051 85 0 11 chr2 3004083 3004364 -250252219 + AluSq SINE Alu 36 313 0 22 56 0 0 chr2 3005159 3005195 -250251388 + AT_rich Low_complexity Low_complexity 1 36 0 541 271 76 89 chr2 3005514 3005961 -250250622 - L2 LINE L2 -2 3311 2871 468 51 0 0 chr2 3007955 3008014 -250248569 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 2047 112 3 0 chr2 3008014 3008310 -250248273 - AluSx SINE Alu -15 297 1 2104 99 7 3 chr2 3008314 3008608 -250247975 - AluSx SINE Alu -17 295 1 1240 244 141 74 chr2 3008959 3009094 -250247489 - Charlie7 DNA MER1_type -1751 861 736 694 47 0 0 chr2 3009094 3009203 -250247380 - L1PA4 LINE L1 0 6155 6059 1240 244 141 74 chr2 3009203 3009367 -250247216 - Charlie7 DNA MER1_type -1876 736 584 5546 118 8 4 chr2 3009367 3010629 -250245954 - L1PA15 LINE L1 -2 6163 4868 1240 244 141 74 chr2 3010629 3011135 -250245448 - Charlie7 DNA MER1_type -2028 584 1 213 43 0 65 chr2 3013920 3013966 -250242617 + (TCCCG)n Simple_repeat Simple_repeat 2 44 0 678 141 70 8 chr2 3014481 3014606 -250241977 - LTR12 LTR ERV1 -10 2428 363 591 211 0 23 chr2 3014606 3014739 -250241844 - pTR5 LTR ERV1 -910 1528 1399 282 211 0 0 chr2 3014743 3014795 -250241788 - LTR30 LTR ERV1 -670 52 1 2169 94 3 3 chr2 3014838 3015136 -250241447 - AluY SINE Alu -13 298 1 712 226 26 0 chr2 3016386 3016541 -250240042 - L1M4 LINE L1 -2229 3917 3759 1526 221 52 13 chr2 3016561 3017019 -250239564 - L1M4 LINE L1 -2545 3601 3126 453 182 65 0 chr2 3017338 3017415 -250239168 + THE1B LTR MaLR 1 82 -282 2209 114 9 24 chr2 3017421 3017753 -250238830 + THE1B LTR MaLR 38 364 0 735 259 45 53 chr2 3017762 3018005 -250238578 - MIR SINE MIR -17 245 5 276 335 180 0 chr2 3018066 3018227 -250238356 + MIR SINE MIR 58 247 -15 518 302 124 24 chr2 3018887 3019679 -250236904 - L2 LINE L2 0 3272 2325 195 125 0 0 chr2 3019711 3019751 -250236832 + (TG)n Simple_repeat Simple_repeat 1 40 0 355 324 45 73 chr2 3019768 3020018 -250236565 - MIR SINE MIR -17 245 4 196 268 110 39 chr2 3023485 3023612 -250232971 + MIR SINE MIR 51 186 -76 195 278 130 19 chr2 3024670 3024778 -250231805 + MIR SINE MIR 16 135 -127 1564 196 43 3 chr2 3025107 3025688 -250230895 - MER67B LTR ERV1 -1 660 10 814 181 0 0 chr2 3025916 3026049 -250230534 + FLAM_C SINE Alu 1 133 0 3109 109 17 11 chr2 3026164 3026632 -250229951 - LTR3b LTR ERVK -29 471 1 21 36 0 0 chr2 3028169 3028197 -250228386 + AT_rich Low_complexity Low_complexity 1 28 0 1670 199 28 25 chr2 3029236 3029593 -250226990 - MLT1A1 LTR MaLR -7 358 1 31 26 0 0 chr2 3030974 3031012 -250225571 + AT_rich Low_complexity Low_complexity 1 38 0 1847 55 13 0 chr2 3031012 3031248 -250225335 - L1PA4 LINE L1 0 6155 5917 240 175 0 0 chr2 3032475 3032515 -250224068 - MER67B LTR ERV1 -621 40 1 266 196 228 22 chr2 3032848 3032940 -250223643 - L2 LINE L2 -19 3253 3143 207 379 48 0 chr2 3033368 3033471 -250223112 + MIR SINE MIR 81 188 -74 31 0 0 0 chr2 3033809 3033840 -250222743 + AT_rich Low_complexity Low_complexity 1 31 0 261 0 0 0 chr2 3034290 3034319 -250222264 + (A)n Simple_repeat Simple_repeat 1 29 0 4387 118 57 50 chr2 3035006 3035783 -250220800 + LTR1 LTR ERV1 1 782 -3 691 262 92 18 chr2 3035866 3036202 -250220381 - L1ME4a LINE L1 -251 5870 5510 953 109 0 7 chr2 3037214 3037352 -250219231 + LTR1 LTR ERV1 648 784 -1 224 219 0 0 chr2 3037435 3037476 -250219107 + (CA)n Simple_repeat Simple_repeat 1 41 0 317 222 152 30 chr2 3037981 3038080 -250218503 - L2 LINE L2 0 3313 3203 510 294 123 11 chr2 3038288 3038475 -250218108 + MIR SINE MIR 55 262 0 2909 242 18 5 chr2 3038773 3039532 -250217051 + L1 LINE L1 2258 3026 -3120 1667 61 0 5 chr2 3039533 3039731 -250216852 + AluSq SINE Alu 1 197 -116 218 288 88 25 chr2 3039799 3039959 -250216624 - L2 LINE L2 -2007 1307 1138 213 39 0 0 chr2 3040729 3040755 -250215828 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1948 146 0 0 chr2 3040757 3041032 -250215551 - AluSx SINE Alu -37 275 1 1083 166 50 15 chr2 3041474 3041673 -250214910 - AluJo SINE Alu -20 292 87 199 254 15 75 chr2 3042347 3042414 -250214169 - L2 LINE L2 -24 3289 3227 461 337 151 12 chr2 3043454 3043798 -250212785 - L2 LINE L2 -1 3312 2921 423 302 137 42 chr2 3043859 3044479 -250212104 - L2 LINE L2 -508 2806 2128 194 383 0 12 chr2 3044506 3044587 -250211996 + L2 LINE L2 3108 3187 -85 826 333 87 60 chr2 3046083 3046903 -250209680 - HAL1 LINE L1 -726 1781 940 342 327 64 0 chr2 3047228 3047384 -250209199 + MER5A DNA MER1_type 1 166 -23 250 303 0 11 chr2 3050808 3050986 -250205597 + (TG)n Simple_repeat Simple_repeat 1 176 0 309 333 20 0 chr2 3051001 3051100 -250205483 + (CATG)n Simple_repeat Simple_repeat 4 104 0 269 211 0 0 chr2 3051103 3051160 -250205423 + MER4-int LTR ERV1 1111 1167 -5431 302 264 73 0 chr2 3051160 3051270 -250205313 + (CATG)n Simple_repeat Simple_repeat 1 118 0 374 232 17 22 chr2 3051274 3051455 -250205128 + (TATG)n Simple_repeat Simple_repeat 1 180 0 308 287 0 11 chr2 3051477 3051658 -250204925 + (TATG)n Simple_repeat Simple_repeat 2 180 0 267 260 0 0 chr2 3051747 3051843 -250204740 + (TG)n Simple_repeat Simple_repeat 1 96 0 459 369 56 13 chr2 3052191 3052424 -250204159 + L2 LINE L2 997 1239 -2075 363 250 20 66 chr2 3052424 3052576 -250204007 - L1 LINE L1 -2342 3804 3660 1040 306 85 5 chr2 3053935 3054357 -250202226 + HsTC2 DNA Tc2 1 456 -1442 896 264 25 16 chr2 3054907 3055225 -250201358 + HsTC2 DNA Tc2 1573 1893 -5 4641 47 2 0 chr2 3056045 3056601 -250199982 + L1PA8 LINE L1 5612 6168 -4 216 97 0 0 chr2 3057119 3057150 -250199433 + (TG)n Simple_repeat Simple_repeat 1 31 0 2118 151 87 25 chr2 3058126 3058529 -250198054 - MSTA LTR MaLR 0 428 1 799 109 8 8 chr2 3060312 3060431 -250196152 + THE1B LTR MaLR 246 364 0 995 201 99 48 chr2 3060467 3060781 -250195802 + L1MC4 LINE L1 7543 7872 -170 182 231 0 0 chr2 3060977 3061016 -250195567 - L2 LINE L2 -1 3271 3233 577 240 35 85 chr2 3061377 3061635 -250194948 - L2 LINE L2 -5 3308 3064 393 102 0 0 chr2 3062020 3062079 -250194504 + (CA)n Simple_repeat Simple_repeat 1 59 0 989 213 262 0 chr2 3062603 3062931 -250193652 + MER47B DNA MER2_type 1 414 -4 2131 146 0 0 chr2 3064316 3064618 -250191965 - AluSx SINE Alu -10 302 1 388 311 43 25 chr2 3065392 3065553 -250191030 + L2 LINE L2 3103 3266 -6 29 60 0 0 chr2 3069033 3069083 -250187500 + AT_rich Low_complexity Low_complexity 1 50 0 375 314 65 40 chr2 3070016 3070264 -250186319 - MLT1L LTR MaLR 0 615 362 2190 120 10 3 chr2 3070508 3070809 -250185774 - AluSq SINE Alu -10 303 1 350 281 105 91 chr2 3070859 3071772 -250184811 - L1M2 LINE L1 -5584 1265 340 619 343 111 54 chr2 3071813 3073272 -250183311 + L2 LINE L2 1472 3272 0 303 304 112 31 chr2 3073622 3073783 -250182800 + MLT1I LTR MaLR 37 210 -199 213 337 174 0 chr2 3077157 3077243 -250179340 + L2 LINE L2 3158 3258 -14 1618 185 16 33 chr2 3077367 3077670 -250178913 + AluJo SINE Alu 4 301 -11 481 290 36 36 chr2 3077744 3077937 -250178646 - L1MB3 LINE L1 -9 6174 5982 2396 97 0 3 chr2 3078255 3078565 -250178018 - AluY SINE Alu -2 309 1 192 135 0 0 chr2 3079002 3079039 -250177544 + (GGGAGA)n Simple_repeat Simple_repeat 4 40 0 491 273 145 12 chr2 3079646 3079935 -250176648 + L1MC4a LINE L1 5145 5467 -743 22 80 0 0 chr2 3080195 3080245 -250176338 + AT_rich Low_complexity Low_complexity 1 50 0 201 121 0 0 chr2 3080255 3080288 -250176295 + (GGGAGA)n Simple_repeat Simple_repeat 4 36 0 29 47 0 0 chr2 3080343 3080386 -250176197 + AT_rich Low_complexity Low_complexity 1 43 0 388 265 34 34 chr2 3080395 3080599 -250175984 + L1MC4a LINE L1 5729 5932 -1876 193 262 164 0 chr2 3082574 3082635 -250173948 + MIR SINE MIR 127 197 -65 252 305 24 98 chr2 3082680 3082844 -250173739 + MIR SINE MIR 110 261 -1 1603 123 36 36 chr2 3082894 3083147 -250173436 - AluSx SINE Alu 0 312 60 304 296 15 67 chr2 3083151 3083286 -250173297 - L1MB3 LINE L1 -266 5855 5728 1274 247 51 0 chr2 3083638 3084030 -250172553 + HAL1 LINE L1 1296 1707 -800 9767 39 1 183 chr2 3084031 3085745 -250170838 - SVA Other Other 0 1386 2 1408 192 25 0 chr2 3085775 3086061 -250170522 - L1MA9 LINE L1 -427 5949 5657 21 82 0 0 chr2 3086067 3086116 -250170467 + AT_rich Low_complexity Low_complexity 1 49 0 13125 199 42 67 chr2 3086692 3088563 -250168020 - L1MA9 LINE L1 -708 5668 3752 2390 89 0 0 chr2 3088563 3088855 -250167728 - AluSx SINE Alu -20 292 1 13125 199 42 67 chr2 3088855 3090826 -250165757 - L1MA9 LINE L1 -2624 3752 1733 2318 95 27 0 chr2 3090826 3091121 -250165462 + AluSg SINE Alu 1 303 -7 892 163 106 0 chr2 3091124 3091284 -250165299 + AluJo/FRAM SINE Alu 133 309 -3 13125 199 42 67 chr2 3091284 3091394 -250165189 - L1MA9 LINE L1 -4645 1731 1620 1980 171 89 30 chr2 3091394 3091798 -250164785 + MSTC LTR MaLR 1 428 0 13125 199 42 67 chr2 3091798 3093784 -250162799 - L1MA9 LINE L1 -4756 1620 1 2308 120 0 16 chr2 3094544 3094861 -250161722 - AluSq SINE Alu 0 313 2 281 293 15 108 chr2 3095203 3095478 -250161105 + MIR3 SINE MIR 12 262 0 217 228 0 63 chr2 3098441 3098599 -250157984 + (TATG)n Simple_repeat Simple_repeat 4 151 0 242 191 43 17 chr2 3098757 3098872 -250157711 + (TATG)n Simple_repeat Simple_repeat 3 120 0 188 256 12 0 chr2 3098890 3098976 -250157607 + (TATG)n Simple_repeat Simple_repeat 2 88 0 404 235 12 29 chr2 3099061 3099231 -250157352 + (TATATG)n Simple_repeat Simple_repeat 2 168 0 3911 121 27 12 chr2 3099238 3099897 -250156686 - HSMAR2 DNA Mariner -1 1301 633 2114 110 32 0 chr2 3099906 3100188 -250156395 + AluSg SINE Alu 18 308 -2 874 126 14 0 chr2 3100218 3100361 -250156222 + HSMAR2 DNA Mariner 739 883 -419 339 262 90 25 chr2 3101048 3101170 -250155413 - MIR SINE MIR -119 143 14 714 264 123 18 chr2 3101269 3101595 -250154988 - MLT1B LTR MaLR -30 360 1 375 207 5 48 chr2 3103023 3103160 -250153423 - MLT1A2 LTR MaLR -234 140 7 343 349 54 12 chr2 3103282 3103448 -250153135 + L3 LINE CR1 1192 1364 -213 256 197 15 15 chr2 3104090 3104156 -250152427 + C-rich Low_complexity Low_complexity 2 67 0 2338 83 7 0 chr2 3105194 3105483 -250151100 + AluY SINE Alu 2 292 -19 289 174 149 8 chr2 3107798 3107919 -250148664 - L1M3 LINE L1 -339 5844 5707 343 286 65 13 chr2 3108296 3108450 -250148133 - MIR3 SINE MIR -25 183 22 227 313 0 0 chr2 3112375 3112439 -250144144 + MIR SINE MIR 42 105 -103 302 244 105 27 chr2 3112905 3113059 -250143524 + MIR SINE MIR 88 262 0 405 155 10 19 chr2 3114396 3114499 -250142084 + CT-rich Low_complexity Low_complexity 3 104 0 1447 133 133 48 chr2 3114499 3114769 -250141814 - AluSx SINE Alu -19 293 1 2401 68 3 7 chr2 3116444 3116740 -250139843 + AluY SINE Alu 1 295 -16 22 35 0 0 chr2 3118134 3118163 -250138420 + AT_rich Low_complexity Low_complexity 1 29 0 2218 152 44 29 chr2 3119511 3119965 -250136618 - Charlie1a DNA MER1_type -356 1099 639 43795 35 21 1 chr2 3119982 3126012 -250130571 - L1PA3 LINE L1 0 6155 1 2203 244 41 14 chr2 3126015 3126602 -250129981 - Charlie1a DNA MER1_type -804 651 49 353 282 29 0 chr2 3126602 3126705 -250129878 - Charlie1a DNA MER1_type -1343 112 7 1114 219 11 6 chr2 3128086 3128384 -250128199 - MLT1A2 LTR MaLR -16 358 16 185 303 32 58 chr2 3129675 3129830 -250126753 + L2 LINE L2 3161 3311 -2 1145 165 176 24 chr2 3131496 3131751 -250124832 - AluJo SINE Alu -8 294 1 2195 110 0 20 chr2 3132161 3132462 -250124121 - AluSg SINE Alu -15 295 1 3070 236 91 30 chr2 3133181 3134013 -250122570 - L1ME1 LINE L1 0 6961 6182 1940 113 0 0 chr2 3134013 3134269 -250122314 - AluSc SINE Alu -17 292 37 3070 236 91 30 chr2 3134269 3135234 -250121349 - L1ME1 LINE L1 -779 6182 5050 21670 112 12 8 chr2 3135241 3138655 -250117928 - L1PA8A LINE L1 -12 6770 3371 261 0 0 0 chr2 3138655 3138684 -250117899 + (TA)n Simple_repeat Simple_repeat 1 29 0 2103 121 13 3 chr2 3138684 3138982 -250117601 - AluSg SINE Alu -9 301 1 21670 112 12 8 chr2 3138982 3139703 -250116880 - L1PA8A LINE L1 -3410 3372 2627 2100 172 31 21 chr2 3139700 3140260 -250116323 - L1PA8A LINE L1 -4559 2228 1668 * 5973 98 28 18 chr2 3140253 3141109 -250115474 - L1PA8A LINE L1 -5008 1203 339 1988 96 55 9 chr2 3141164 3141547 -250115036 - LTR7 LTR ERV1 0 450 1 3623 113 20 16 chr2 3141547 3142102 -250114481 - HERVH LTR ERV1 0 7713 7157 1659 122 16 0 chr2 3142094 3142348 -250114235 - HERVH LTR ERV1 -1696 6017 5760 * 5033 121 2 2 chr2 3142344 3143073 -250113510 - HERVH LTR ERV1 -3001 4712 3995 18715 143 9 27 chr2 3143086 3146565 -250110018 - HERVH LTR ERV1 -3979 3734 1 2074 105 31 8 chr2 3146565 3146956 -250109627 - LTR7 LTR ERV1 0 450 1 1296 227 84 27 chr2 3146956 3147362 -250109221 - L1ME1 LINE L1 -1928 5013 4585 431 119 15 0 chr2 3147361 3147428 -250109155 - L1MD3 LINE L1 -1188 6807 6740 * 1751 192 48 0 chr2 3147456 3147810 -250108773 - L1MB7 LINE L1 -26 6158 5788 * 3321 229 54 25 chr2 3147807 3148388 -250108195 - L1ME1 LINE L1 -2569 4372 3809 2246 122 48 14 chr2 3148388 3148740 -250107843 + THE1B LTR MaLR 1 364 0 3321 229 54 25 chr2 3148740 3149263 -250107320 - L1ME1 LINE L1 -3132 3809 3236 322 234 35 21 chr2 3149248 3149393 -250107190 - L1ME1 LINE L1 -4617 2324 2178 * 445 282 20 63 chr2 3149415 3149488 -250107095 - L1ME1 LINE L1 -4888 1535 1460 854 256 42 0 chr2 3149488 3149703 -250106880 - MER58A DNA MER1_type 0 224 1 445 282 20 63 chr2 3149703 3149881 -250106702 - L1ME1 LINE L1 -4963 1460 1295 870 245 50 0 chr2 3149881 3150081 -250106502 - MER58A DNA MER1_type 0 224 15 1383 218 116 9 chr2 3150081 3150512 -250106071 - L1ME1 LINE L1 -5140 1283 807 855 307 115 23 chr2 3150549 3151106 -250105477 - L1ME1 LINE L1 -5755 668 61 257 167 17 50 chr2 3152134 3152194 -250104389 - MIR SINE MIR -121 141 84 514 111 0 20 chr2 3152493 3152592 -250103991 + (TCCC)n Simple_repeat Simple_repeat 2 98 0 1707 218 9 14 chr2 3156866 3157214 -250099369 - MER7A DNA MER2_type 0 346 3 215 360 9 9 chr2 3157340 3157451 -250099132 + MIR SINE MIR 34 144 -64 295 286 181 29 chr2 3158209 3158380 -250098203 - L3 LINE CR1 -319 1258 1062 2073 200 30 30 chr2 3158475 3158975 -250097608 - MLT1D LTR MaLR -2 503 4 2146 162 21 72 chr2 3159616 3160086 -250096497 - L1MC1 LINE L1 0 6333 5888 282 298 96 40 chr2 3160477 3160675 -250095908 - MIR SINE MIR -23 239 31 21 0 0 0 chr2 3161329 3161350 -250095233 + AT_rich Low_complexity Low_complexity 1 21 0 1913 167 0 0 chr2 3161366 3161659 -250094924 - AluJo SINE Alu -19 293 1 2288 190 36 73 chr2 3161699 3162196 -250094387 + L1MD3 LINE L1 7419 7892 -103 2490 57 0 0 chr2 3162196 3162492 -250094091 + AluY SINE Alu 1 296 -15 2288 190 36 73 chr2 3162492 3162583 -250094000 + L1MD3 LINE L1 7892 7985 -10 489 309 68 4 chr2 3162877 3163129 -250093454 - L2 LINE L2 -1332 1982 1715 337 154 0 0 chr2 3163306 3163358 -250093225 - MER20 DNA MER1_type 0 219 168 862 271 298 16 chr2 3163365 3164067 -250092516 - L2 LINE L2 -1696 1618 1115 279 0 0 0 chr2 3164067 3164098 -250092485 + (GA)n Simple_repeat Simple_repeat 2 32 0 862 271 298 16 chr2 3164098 3164371 -250092212 - L2 LINE L2 -2199 1115 368 313 261 11 23 chr2 3164382 3164470 -250092113 + L1ME LINE L1 5582 5668 -453 29 28 0 0 chr2 3164609 3164645 -250091938 + AT_rich Low_complexity Low_complexity 1 36 0 456 287 223 16 chr2 3166542 3166789 -250089794 + Tigger8 DNA MER2_type 29 326 -340 190 106 43 0 chr2 3166991 3167038 -250089545 + (TTATA)n Simple_repeat Simple_repeat 5 53 0 429 263 227 10 chr2 3167168 3167366 -250089217 - L2 LINE L2 0 3272 3032 181 252 133 22 chr2 3167550 3167685 -250088898 - MIR SINE MIR -52 210 61 441 249 64 77 chr2 3168220 3168555 -250088028 - MLT1J2 LTR MaLR -3 416 89 240 223 277 0 chr2 3170767 3170879 -250085704 + MIR SINE MIR 112 254 -8 327 388 25 0 chr2 3171418 3171539 -250085044 + MIR SINE MIR 22 145 -63 346 286 54 65 chr2 3171547 3171732 -250084851 - MIR3 SINE MIR -6 202 20 445 220 17 12 chr2 3171732 3171905 -250084678 + CT-rich Low_complexity Low_complexity 3 176 0 917 154 149 0 chr2 3171907 3172082 -250084501 - AluJo SINE Alu -25 287 87 21 0 0 0 chr2 3172223 3172244 -250084339 + AT_rich Low_complexity Low_complexity 1 21 0 2502 101 121 16 chr2 3173284 3173671 -250082912 + MSTA LTR MaLR 1 428 0 384 22 0 0 chr2 3173751 3173796 -250082787 + (TG)n Simple_repeat Simple_repeat 2 46 0 22 80 0 0 chr2 3175492 3175542 -250081041 + AT_rich Low_complexity Low_complexity 1 50 0 195 343 0 30 chr2 3175791 3175858 -250080725 - L2 LINE L2 -71 3201 3137 577 253 90 50 chr2 3175990 3176488 -250080095 + L1MEc LINE L1 784 1301 -5095 299 304 164 29 chr2 3176644 3176924 -250079659 - L2 LINE L2 -1682 1632 1315 4226 95 20 4 chr2 3176995 3177540 -250079043 - MER41A LTR ERV1 0 554 1 657 196 40 20 chr2 3178813 3178961 -250077622 - L1M4c LINE L1 -4860 1786 1636 * 3779 226 15 33 chr2 3178949 3179831 -250076752 - L1M4c LINE L1 -5662 880 15 322 236 0 14 chr2 3180144 3180216 -250076367 + MER94 DNA DNA 1 71 -63 227 265 0 0 chr2 3180231 3180280 -250076303 + GA-rich Low_complexity Low_complexity 2 50 0 2078 127 7 0 chr2 3180348 3180648 -250075935 - AluSx SINE Alu -10 302 1 21 0 0 0 chr2 3180856 3180877 -250075706 + AT_rich Low_complexity Low_complexity 1 21 0 1883 223 79 28 chr2 3180926 3181535 -250075048 + MER114 LTR ERV 1 640 -8 649 264 137 42 chr2 3182535 3183038 -250073545 - L1MEc LINE L1 -5812 584 34 4797 88 45 37 chr2 3184513 3185194 -250071389 - LTR12 LTR ERV1 -1 687 1 2857 80 14 8 chr2 3185421 3185783 -250070800 - THE1B LTR MaLR 0 364 1 527 297 36 10 chr2 3186272 3186464 -250070119 + MER63A DNA MER1_type 14 210 0 189 195 0 0 chr2 3187278 3187319 -250069264 + (CATATA)n Simple_repeat Simple_repeat 1 41 0 338 253 11 22 chr2 3187320 3187391 -250069192 + L1MC4 LINE L1 6613 6684 -1358 243 0 0 0 chr2 3187391 3187418 -250069165 + (TC)n Simple_repeat Simple_repeat 2 28 0 338 253 11 22 chr2 3187418 3187437 -250069146 + L1MC4 LINE L1 6684 6702 -1340 356 215 9 0 chr2 3187537 3187644 -250068939 + (TA)n Simple_repeat Simple_repeat 2 109 0 243 0 0 0 chr2 3187649 3187676 -250068907 + (TC)n Simple_repeat Simple_repeat 2 28 0 180 0 0 0 chr2 3187675 3187695 -250068888 + (TA)n Simple_repeat Simple_repeat 1 20 0 * 225 0 0 0 chr2 3187694 3187719 -250068864 + (CA)n Simple_repeat Simple_repeat 2 26 0 320 229 9 0 chr2 3187801 3187910 -250068673 + (TA)n Simple_repeat Simple_repeat 2 111 0 252 170 0 0 chr2 3187980 3188033 -250068550 + (TA)n Simple_repeat Simple_repeat 2 54 0 2492 166 29 45 chr2 3188035 3188503 -250068080 - MLT2B3 LTR ERVL -35 510 58 1762 166 11 65 chr2 3188505 3188861 -250067722 + MER1B DNA MER1_type 1 337 -2 542 31 0 0 chr2 3188862 3188926 -250067657 - MLT2B3 LTR ERVL -490 64 1 498 276 56 23 chr2 3189531 3189745 -250066838 - Zaphod DNA AcHobo 0 4031 3811 1919 175 55 134 chr2 3189748 3190566 -250066017 - Zaphod DNA AcHobo -2756 1275 523 234 268 71 0 chr2 3190669 3190781 -250065802 - Zaphod DNA AcHobo -3719 312 193 320 276 126 0 chr2 3192067 3192194 -250064389 + MIR3 SINE MIR 4 146 -62 2679 191 85 77 chr2 3192288 3193007 -250063576 + LTR8A LTR ERV1 1 725 -2 1799 266 19 8 chr2 3193141 3193623 -250062960 - MER41E LTR ERV1 -5 507 21 1916 171 24 0 chr2 3194018 3194358 -250062225 - MER57A LTR ERV1 -48 355 8 2024 108 4 14 chr2 3195085 3195362 -250061221 + AluSp SINE Alu 1 274 -39 3788 183 57 1 chr2 3196242 3196947 -250059636 + Tigger2 DNA MER2_type 1 744 -1974 1616 127 20 0 chr2 3197014 3197266 -250059317 + Tigger2 DNA MER2_type 2462 2718 0 3495 118 19 6 chr2 3197325 3197841 -250058742 - MER1A DNA MER1_type -6 523 1 245 285 244 16 chr2 3197869 3198062 -250058521 + MIR SINE MIR 21 257 -5 626 202 0 9 chr2 3198215 3198329 -250058254 + L2 LINE L2 3197 3309 -4 25 51 0 0 chr2 3200683 3200722 -250055861 + AT_rich Low_complexity Low_complexity 1 39 0 497 234 109 85 chr2 3201039 3201306 -250055277 - L1ME1 LINE L1 -18 6148 5875 1340 250 76 7 chr2 3201429 3201865 -250054718 - MLT1C LTR MaLR -1 466 1 192 211 0 0 chr2 3202300 3202338 -250054245 + L3 LINE CR1 1514 1551 -26 270 300 118 18 chr2 3203123 3203233 -250053350 - L2 LINE L2 0 3313 3193 1437 37 0 0 chr2 3203243 3203404 -250053179 - L1PA3 LINE L1 -3 6152 5992 825 41 0 0 chr2 3203404 3203502 -250053081 + L1PA3 LINE L1 5899 5996 -159 1904 155 0 19 chr2 3203651 3203960 -250052623 - AluJo SINE Alu -9 303 1 383 178 82 0 chr2 3204246 3204319 -250052264 + MER3 DNA MER1_type 115 193 -16 212 193 36 133 chr2 3204496 3204579 -250052004 + L2 LINE L2 3117 3191 -81 247 326 74 0 chr2 3204640 3204735 -250051848 - L2 LINE L2 -22 3250 3149 620 318 108 43 chr2 3204859 3205516 -250051067 - L2 LINE L2 -338 2976 2277 259 182 0 18 chr2 3205552 3205607 -250050976 + Ricksha DNA DNA 815 868 -1178 2207 163 52 12 chr2 3205610 3205847 -250050736 - MLT1C LTR MaLR -27 440 179 2412 94 0 0 chr2 3205847 3206156 -250050427 - AluSg SINE Alu -1 309 1 2207 163 52 12 chr2 3206156 3206323 -250050260 - MLT1C LTR MaLR -288 179 20 694 234 119 22 chr2 3206340 3206566 -250050017 + MLT1A1 LTR MaLR 11 258 -107 865 173 12 19 chr2 3206577 3206739 -250049844 + MLT1A1 LTR MaLR 205 365 0 268 276 120 26 chr2 3206759 3206951 -250049632 - L2 LINE L2 -1087 2227 2018 1699 215 27 87 chr2 3208130 3208242 -250048341 - MLT2B3 LTR ERVL -2 552 435 3568 81 25 2 chr2 3208242 3208685 -250047898 + MLT2A2 LTR ERVL 1 453 0 1699 215 27 87 chr2 3208685 3209158 -250047425 - MLT2B3 LTR ERVL -119 435 2 1266 152 156 56 chr2 3209485 3209659 -250046924 + AluJo SINE Alu 1 213 -99 2212 152 48 28 chr2 3209659 3210014 -250046569 - THE1B LTR MaLR 0 364 3 1266 152 156 56 chr2 3210014 3210109 -250046474 + AluJo SINE Alu 213 297 -15 241 143 36 18 chr2 3210886 3210942 -250045641 - L1MC4 LINE L1 -1343 6699 6643 268 329 48 14 chr2 3211708 3211854 -250044729 + L2 LINE L2 2885 3035 -237 21 0 0 0 chr2 3211961 3211982 -250044601 + AT_rich Low_complexity Low_complexity 1 21 0 10459 129 11 10 chr2 3212918 3215302 -250041281 - L1PA11 LINE L1 -2 6172 3775 2523 102 0 74 chr2 3215302 3215691 -250040892 - L1PB1 LINE L1 0 6151 5787 7150 123 13 3 chr2 3215695 3216972 -250039611 - L1MA2 LINE L1 -26 6278 4992 6549 126 2 25 chr2 3216970 3218377 -250038206 - L1PB1 LINE L1 -3 7586 6212 * 1503 249 37 0 chr2 3218373 3218810 -250037773 - L1 LINE L1 -2794 4790 4338 * 10232 125 54 9 chr2 3218944 3221242 -250035341 - L1PBa LINE L1 -3714 3148 599 1309 131 10 0 chr2 3221216 3221414 -250035169 - L1PBa LINE L1 -6663 200 1 * 14662 205 23 28 chr2 3221425 3225583 -250031000 - L1PB1 LINE L1 -2361 5223 2 514 258 50 33 chr2 3226974 3227156 -250029427 - L1MC4 LINE L1 -1373 6669 6485 275 70 0 0 chr2 3228517 3228560 -250028023 + Alu SINE Alu 260 302 0 254 69 52 69 chr2 3228693 3228751 -250027832 + MLT1B LTR MaLR 1 57 -333 186 304 120 0 chr2 3229183 3229275 -250027308 - MIR SINE MIR -71 191 89 463 279 109 80 chr2 3231499 3231866 -250024717 + MLT1H1 LTR MaLR 100 484 -71 2181 108 0 7 chr2 3231866 3232172 -250024411 + AluSx SINE Alu 1 304 -8 463 279 109 80 chr2 3232172 3232244 -250024339 + MLT1H1 LTR MaLR 484 552 -3 867 87 17 29 chr2 3233015 3233188 -250023395 + (TTCCC)n Simple_repeat Simple_repeat 3 173 0 484 328 22 11 chr2 3234026 3234209 -250022374 - MIR SINE MIR -8 254 70 2489 110 17 80 chr2 3234237 3234354 -250022229 - L1MA4A LINE L1 -11 6292 6169 2380 64 0 10 chr2 3234354 3234667 -250021916 - AluY SINE Alu -1 310 1 2489 110 17 80 chr2 3234667 3235014 -250021569 - L1MA4A LINE L1 -134 6169 5857 608 162 0 51 chr2 3235221 3235264 -250021319 + L1MA3 LINE L1 6195 6239 -66 2439 120 28 11 chr2 3235264 3235622 -250020961 + THE1B LTR MaLR 1 364 0 608 162 0 51 chr2 3235622 3235695 -250020888 + L1MA3 LINE L1 6239 6305 0 265 320 22 10 chr2 3236808 3236942 -250019641 + MIR SINE MIR 85 218 -44 241 232 85 73 chr2 3237045 3237127 -250019456 + MIR SINE MIR 87 169 -93 1841 108 7 32 chr2 3237648 3237926 -250018657 + AluSx SINE Alu 3 273 -39 228 292 0 0 chr2 3238463 3238528 -250018055 + (CAATT)n Simple_repeat Simple_repeat 3 67 0 185 250 0 18 chr2 3239758 3239814 -250016769 + L2 LINE L2 3194 3248 -24 283 175 18 0 chr2 3239814 3239871 -250016712 - MLT1I LTR MaLR 0 409 352 769 276 44 4 chr2 3239918 3240143 -250016440 - MLT1I LTR MaLR -175 234 1 2086 74 0 0 chr2 3240516 3240786 -250015797 + AluY SINE Alu 39 308 -3 2319 81 0 0 chr2 3242254 3242563 -250014020 + AluY SINE Alu 1 309 -2 2054 100 19 19 chr2 3242852 3243163 -250013420 + AluSq SINE Alu 3 313 0 803 185 43 19 chr2 3243965 3244176 -250012407 + Charlie5 DNA MER1_type 2366 2581 -31 335 279 14 0 chr2 3244244 3244391 -250012192 + CT-rich Low_complexity Low_complexity 4 152 0 2725 83 11 0 chr2 3244630 3244981 -250011602 - THE1A LTR MaLR 0 355 1 12102 93 2 1 chr2 3244981 3246558 -250010025 - THE1A-int LTR MaLR 0 1580 1 2486 104 17 20 chr2 3246558 3246914 -250009669 - THE1A LTR MaLR 0 355 1 346 307 122 55 chr2 3246982 3247220 -250009363 - L2 LINE L2 0 3272 3019 249 327 36 27 chr2 3248259 3248369 -250008214 + L2 LINE L2 3157 3267 -5 2327 103 0 0 chr2 3248434 3248746 -250007837 - AluSx SINE Alu 0 312 1 204 276 105 0 chr2 3252093 3252169 -250004414 + MIR SINE MIR 138 221 -41 248 292 123 39 chr2 3252623 3252753 -250003830 + MIR3 SINE MIR 34 174 -34 227 261 203 0 chr2 3253407 3253476 -250003107 - MIR SINE MIR -63 145 63 197 304 36 0 chr2 3253969 3254025 -250002558 + L2 LINE L2 3248 3305 -8 372 311 0 19 chr2 3254025 3254131 -250002452 + MIR SINE MIR 42 145 -63 25 51 0 0 chr2 3254222 3254261 -250002322 + AT_rich Low_complexity Low_complexity 1 39 0 432 214 119 8 chr2 3254783 3254909 -250001674 + MIR SINE MIR 113 252 -10 220 273 15 15 chr2 3255057 3255123 -250001460 + L2 LINE L2 3202 3267 -5 2202 98 0 0 chr2 3255268 3255574 -250001009 - AluSc SINE Alu -3 306 1 381 258 25 58 chr2 3255603 3255723 -250000860 + L2 LINE L2 3134 3249 -23 329 207 224 35 chr2 3255965 3256081 -250000502 - L2 LINE L2 -15 3298 3161 395 288 85 30 chr2 3257339 3257575 -249999008 + HERV16 LTR ERVL 1241 1489 -3507 379 230 11 0 chr2 3258021 3258108 -249998475 - MER53 DNA DNA -2 187 100 269 146 104 0 chr2 3259440 3259488 -249997095 + Charlie3 DNA MER1_type 2645 2697 -13 295 178 14 14 chr2 3259542 3259615 -249996968 + GA-rich Low_complexity Low_complexity 4 76 0 982 264 162 57 chr2 3259829 3260085 -249996498 - HAL1 LINE L1 -1352 1155 927 1915 141 7 0 chr2 3260085 3260384 -249996199 - AluSx SINE Alu -11 301 1 982 264 162 57 chr2 3260384 3260795 -249995788 - HAL1 LINE L1 -1580 927 418 285 232 0 0 chr2 3260858 3260927 -249995656 + CT-rich Low_complexity Low_complexity 5 73 0 3629 121 19 4 chr2 3260978 3261492 -249995091 - MER1A DNA MER1_type -5 524 3 277 303 37 28 chr2 3261736 3261845 -249994738 - L1MC4 LINE L1 -140 7902 7793 1513 203 128 30 chr2 3261860 3262298 -249994285 - MLT1D LTR MaLR -4 501 21 1782 152 18 0 chr2 3262436 3262713 -249993870 + AluJb SINE Alu 13 294 -18 412 214 128 0 chr2 3262723 3262840 -249993743 - L1MC4 LINE L1 -386 7656 7525 1838 135 44 0 chr2 3263350 3263647 -249992936 - AluSx SINE Alu -2 310 1 245 240 13 13 chr2 3263721 3263796 -249992787 + (TA)n Simple_repeat Simple_repeat 2 76 0 1800 144 0 21 chr2 3264422 3264713 -249991870 - AluJo SINE Alu -10 302 18 282 116 0 0 chr2 3264935 3264978 -249991605 + (GGGGA)n Simple_repeat Simple_repeat 4 46 0 2152 98 55 33 chr2 3265028 3265395 -249991188 + THE1C LTR MaLR 1 375 0 250 328 25 34 chr2 3266063 3266182 -249990401 - MIR SINE MIR -121 141 24 244 325 51 8 chr2 3266724 3266841 -249989742 - MIR SINE MIR -90 172 51 591 134 47 20 chr2 3267946 3268298 -249988285 + (TG)n Simple_repeat Simple_repeat 1 361 0 499 180 28 17 chr2 3268313 3268491 -249988092 + (TG)n Simple_repeat Simple_repeat 1 180 0 666 124 47 9 chr2 3268524 3268863 -249987720 + (TG)n Simple_repeat Simple_repeat 1 352 0 410 117 32 11 chr2 3269138 3269232 -249987351 + (TG)n Simple_repeat Simple_repeat 1 96 0 872 196 119 35 chr2 3269241 3269559 -249987024 + MSTC LTR MaLR 42 421 -7 1102 240 50 89 chr2 3269766 3270325 -249986258 - MER89 LTR ERV1 -22 537 1 180 0 0 0 chr2 3270941 3270961 -249985622 + (TC)n Simple_repeat Simple_repeat 2 21 0 3774 157 21 97 chr2 3271897 3272108 -249984475 - MER54B LTR ERVL 0 793 568 1625 184 0 27 chr2 3272108 3272402 -249984181 - AluJb SINE Alu -26 286 1 3774 157 21 97 chr2 3272402 3273048 -249983535 - MER54B LTR ERVL -225 568 1 304 346 59 0 chr2 3275697 3275833 -249980750 - MIR SINE MIR -18 244 101 1775 194 22 27 chr2 3275905 3276272 -249980311 + MLT1A1 LTR MaLR 1 365 0 204 125 0 0 chr2 3276491 3276523 -249980060 + (CTG)n Simple_repeat Simple_repeat 2 33 0 243 216 39 0 chr2 3276638 3276689 -249979894 + CT-rich Low_complexity Low_complexity 3 55 0 257 287 151 6 chr2 3277500 3277623 -249978960 - MIR SINE MIR -61 147 30 259 279 67 39 chr2 3277702 3277806 -249978777 + MIR SINE MIR 48 154 -108 227 266 16 0 chr2 3279322 3279386 -249977197 - L2 LINE L2 -5 3267 3203 306 281 58 8 chr2 3279425 3279546 -249977037 + L1MEd LINE L1 54 180 -5939 552 231 140 52 chr2 3279866 3280174 -249976409 + L1MC4 LINE L1 7708 8042 0 655 331 84 22 chr2 3280177 3280545 -249976038 + L1MEd LINE L1 404 794 -5325 303 305 121 11 chr2 3281289 3281561 -249975022 + L1M4 LINE L1 3626 3927 -2219 531 269 87 107 chr2 3281709 3282316 -249974267 - MLT1G1 LTR MaLR 0 595 1 185 333 0 15 chr2 3282715 3282781 -249973802 - MIR SINE MIR -150 112 48 738 462 14 41 chr2 3283671 3283745 -249972838 + MER44D DNA MER2_type 1 76 -2415 180 0 0 0 chr2 3283745 3283765 -249972818 + (GA)n Simple_repeat Simple_repeat 1 20 0 738 462 14 41 chr2 3283765 3283980 -249972603 + MER44D DNA MER2_type 76 552 -57 241 248 173 51 chr2 3284066 3284280 -249972303 - L1MEc LINE L1 -1163 5052 4813 617 297 110 64 chr2 3284605 3285956 -249970627 - L1MEc LINE L1 -1672 4543 3255 2504 98 0 35 chr2 3285956 3285996 -249970587 - THE1B LTR MaLR 0 364 324 2252 95 6 38 chr2 3285996 3286312 -249970271 + AluY SINE Alu 1 306 -5 2504 98 0 35 chr2 3286312 3286648 -249969935 - THE1B LTR MaLR -40 324 1 10460 108 33 34 chr2 3286648 3288230 -249968353 - THE1B-int LTR MaLR 0 1580 1 2611 123 0 3 chr2 3288230 3288595 -249967988 - THE1B LTR MaLR 0 364 1 617 297 110 64 chr2 3288595 3289030 -249967553 - L1MEc LINE L1 -2959 3256 2673 4084 237 79 18 chr2 3289160 3290573 -249966010 - L1MC/D LINE L1 -743 5821 4424 592 183 46 8 chr2 3290617 3290748 -249965835 - L1 LINE L1 -1862 4284 4149 * 5910 126 28 22 chr2 3290746 3291973 -249964610 - L1P4 LINE L1 -587 5581 4364 3534 274 24 24 chr2 3291995 3293158 -249963425 - L1MC/D LINE L1 -4878 1167 5 965 222 4 12 chr2 3293172 3293424 -249963159 - L1MEc LINE L1 -3951 2445 2196 1559 93 0 0 chr2 3293459 3293652 -249962931 + AluSg1 SINE Alu 9 201 -108 227 148 37 0 chr2 3293752 3293806 -249962777 + C-rich Low_complexity Low_complexity 2 57 0 228 111 0 0 chr2 3294196 3294232 -249962351 + (T)n Simple_repeat Simple_repeat 1 36 0 22298 154 25 41 chr2 3295264 3296189 -249960394 - L1PB1 LINE L1 -1 6465 5527 2872 93 0 3 chr2 3296189 3296565 -249960018 - THE1C LTR MaLR 0 375 1 22298 154 25 41 chr2 3296565 3297358 -249959225 - L1PB1 LINE L1 -939 5527 4723 1841 126 18 22 chr2 3297358 3297636 -249958947 - AluSx SINE Alu 0 312 36 22298 154 25 41 chr2 3297636 3297698 -249958885 - L1PB1 LINE L1 -1743 4723 4662 6544 71 0 2 chr2 3297698 3299362 -249957221 - L1PA8A LINE L1 -3 6128 4477 5737 38 0 18 chr2 3299367 3300072 -249956511 - L1PA4 LINE L1 0 6155 5464 22298 154 25 41 chr2 3300072 3301264 -249955319 - L1PB1 LINE L1 -1808 4658 3448 234 0 0 0 chr2 3301264 3301290 -249955293 + (TA)n Simple_repeat Simple_repeat 2 27 0 22298 154 25 41 chr2 3301290 3304807 -249951776 - L1PB1 LINE L1 -3018 3448 1 4541 206 16 2 chr2 3304817 3305751 -249950832 - L1 LINE L1 -1773 4373 3427 336 270 138 7 chr2 3307010 3307162 -249949421 - MIR SINE MIR -79 183 12 215 342 63 54 chr2 3309577 3309799 -249946784 - L2 LINE L2 -125 3147 2924 3580 75 25 2 chr2 3311079 3311559 -249945024 + L1PA8 LINE L1 5682 6172 0 483 247 121 6 chr2 3312229 3312411 -249944172 + MIR SINE MIR 59 261 -1 281 250 218 16 chr2 3313193 3313445 -249943138 - L1ME4a LINE L1 -4 6117 5815 23 0 0 0 chr2 3313476 3313499 -249943084 + AT_rich Low_complexity Low_complexity 1 23 0 409 269 154 29 chr2 3313755 3313930 -249942653 - Charlie8 DNA MER1_type -2195 222 26 237 363 50 16 chr2 3314338 3314520 -249942063 - MIR SINE MIR -73 189 2 316 275 128 0 chr2 3315649 3315758 -249940825 - L2 LINE L2 -3 3310 3188 2367 92 7 3 chr2 3316097 3316400 -249940183 - AluSx SINE Alu -8 304 1 230 206 118 0 chr2 3318177 3318245 -249938338 - MIR3 SINE MIR -21 187 112 21 36 0 0 chr2 3318783 3318811 -249937772 + AT_rich Low_complexity Low_complexity 1 28 0 195 136 0 58 chr2 3319021 3319124 -249937459 + (TA)n Simple_repeat Simple_repeat 1 97 0 186 133 0 0 chr2 3319776 3319806 -249936777 + (T)n Simple_repeat Simple_repeat 1 30 0 187 221 0 88 chr2 3320954 3321022 -249935561 + MIR SINE MIR 109 170 -92 315 62 0 42 chr2 3322184 3322232 -249934351 + Alu SINE Alu 250 295 -6 1349 280 48 26 chr2 3322232 3322914 -249933669 - L1MEc LINE L1 -4222 2174 1478 1913 142 79 17 chr2 3323935 3324288 -249932295 + THE1C LTR MaLR 1 375 0 386 267 62 67 chr2 3325189 3325399 -249931184 - MLT1K LTR MaLR 0 588 380 256 250 0 112 chr2 3325425 3325541 -249931042 - L2 LINE L2 -18 3295 3193 1782 196 88 60 chr2 3325927 3326426 -249930157 - MLT2B1 LTR ERVL -3 517 5 330 317 81 16 chr2 3326427 3326613 -249929970 - MIR SINE MIR -25 237 40 201 250 26 13 chr2 3327874 3327950 -249928633 + CT-rich Low_complexity Low_complexity 3 79 0 215 237 278 18 chr2 3329065 3329234 -249927349 - MIR SINE MIR -20 242 30 299 310 8 0 chr2 3329877 3330006 -249926577 + (TG)n Simple_repeat Simple_repeat 2 131 0 423 322 0 0 chr2 3330025 3330205 -249926378 + (TG)n Simple_repeat Simple_repeat 1 180 0 2282 266 70 14 chr2 3330786 3331737 -249924846 - Charlie2 DNA MER1_type 0 2862 1858 464 284 64 36 chr2 3331757 3332007 -249924576 - Charlie2 DNA MER1_type -2560 302 46 497 287 18 24 chr2 3332014 3332181 -249924402 - MER5B DNA MER1_type -12 166 1 204 276 83 70 chr2 3333052 3333208 -249923375 + L2 LINE L2 3155 3312 -1 3064 196 16 13 chr2 3333626 3334260 -249922323 - L1MA4 LINE L1 -6 6294 5659 2019 144 42 31 chr2 3335386 3335746 -249920837 + THE1B LTR MaLR 1 364 0 392 215 0 0 chr2 3335919 3336012 -249920571 - L1MB8 LINE L1 -2 6176 6084 2130 222 45 8 chr2 3336024 3336515 -249920068 - L1MB4 LINE L1 -13 6167 5659 248 222 34 26 chr2 3337049 3337166 -249919417 + (TA)n Simple_repeat Simple_repeat 2 119 0 243 175 48 16 chr2 3337882 3337945 -249918638 + MIR SINE MIR 104 168 -94 306 290 128 39 chr2 3338686 3339027 -249917556 - L2 LINE L2 -183 3130 2705 183 311 123 0 chr2 3339056 3339162 -249917421 - L2 LINE L2 -703 2611 2493 809 263 10 0 chr2 3339212 3339406 -249917177 - MLT1A1 LTR MaLR 0 365 170 788 167 29 64 chr2 3339510 3339714 -249916869 - MLT1A1 LTR MaLR -176 198 2 1617 199 178 20 chr2 3341063 3341108 -249915475 - MLT2B2 LTR ERVL 0 515 478 240 35 0 0 chr2 3341108 3341137 -249915446 + (CA)n Simple_repeat Simple_repeat 2 30 0 1617 199 178 20 chr2 3341137 3341534 -249915049 - MLT2B2 LTR ERVL -37 478 3 2365 127 25 0 chr2 3341679 3342034 -249914549 - THE1B LTR MaLR 0 364 1 3893 75 26 0 chr2 3342034 3342530 -249914053 - THE1B-int LTR MaLR 0 1580 1072 4401 164 33 33 chr2 3342531 3343518 -249913065 - MER11C LTR ERVK 0 1071 1 6923 116 19 40 chr2 3343518 3344602 -249911981 - THE1B-int LTR MaLR -519 1061 1 2319 130 28 3 chr2 3344602 3344956 -249911627 - THE1B LTR MaLR 0 364 2 275 317 49 21 chr2 3344998 3345140 -249911443 - MIR3 SINE MIR -60 148 3 2095 118 180 114 chr2 3345434 3346002 -249910581 + LTR18B LTR ERVL 1 605 -9 267 317 50 17 chr2 3346091 3346211 -249910372 + MIR SINE MIR 22 145 -117 1642 183 49 24 chr2 3346668 3346996 -249909587 - MLT1A1 LTR MaLR -4 361 26 216 0 0 0 chr2 3348322 3348346 -249908237 + (T)n Simple_repeat Simple_repeat 1 24 0 219 336 37 15 chr2 3349104 3349238 -249907345 + MIR SINE MIR 16 152 -56 2529 116 3 0 chr2 3350644 3350998 -249905585 + THE1A LTR MaLR 1 355 0 1358 147 0 9 chr2 3352305 3352516 -249904067 - AluJb SINE Alu -20 292 84 326 253 110 24 chr2 3352714 3352858 -249903725 - MER5B DNA MER1_type -24 165 2 200 339 77 15 chr2 3353388 3353518 -249903065 - MIR3 SINE MIR -6 202 65 2228 148 36 17 chr2 3353672 3354029 -249902554 + THE1B LTR MaLR 1 364 0 182 193 35 70 chr2 3354503 3354560 -249902023 - MIR3 SINE MIR -54 154 100 1111 124 34 51 chr2 3354658 3354837 -249901746 - L1MA8 LINE L1 -10 6281 6104 2188 113 3 0 chr2 3354837 3355140 -249901443 + AluSx SINE Alu 1 304 0 1111 124 34 51 chr2 3355140 3355193 -249901390 - L1MA8 LINE L1 -187 6104 6052 307 286 0 0 chr2 3355235 3355312 -249901271 + MIR SINE MIR 173 249 -13 472 306 40 5 chr2 3355401 3355600 -249900983 - MIR SINE MIR -7 255 50 237 204 0 0 chr2 3356243 3356292 -249900291 - L3 LINE CR1 -180 1397 1349 21 0 0 0 chr2 3356634 3356655 -249899928 + AT_rich Low_complexity Low_complexity 1 21 0 255 232 29 14 chr2 3356755 3356824 -249899759 - MLT1I LTR MaLR -30 379 310 264 356 29 19 chr2 3357042 3357250 -249899333 - L1M4 LINE L1 -1333 4813 4604 4637 205 19 12 chr2 3357286 3358484 -249898099 - L1PA16 LINE L1 -722 5444 4232 4068 137 63 1 chr2 3358484 3359149 -249897434 + L1PA16 LINE L1 5452 6157 -9 39 0 0 0 chr2 3359559 3359598 -249896985 + AT_rich Low_complexity Low_complexity 1 39 0 273 183 0 0 chr2 3359854 3359914 -249896669 + (TA)n Simple_repeat Simple_repeat 2 61 0 467 322 91 10 chr2 3360145 3360539 -249896044 - HAL1 LINE L1 -855 1652 1227 468 286 36 96 chr2 3360561 3360977 -249895606 - L1MEd LINE L1 -5034 1085 695 217 358 37 19 chr2 3361681 3361843 -249894740 - L3 LINE CR1 -606 971 807 3598 137 18 0 chr2 3362009 3362521 -249894062 + MER1A DNA MER1_type 1 521 -8 276 331 108 7 chr2 3362675 3362823 -249893760 + MIR SINE MIR 49 211 -51 744 212 38 11 chr2 3363462 3363646 -249892937 + MER5A DNA MER1_type 1 189 0 215 205 0 0 chr2 3364464 3364503 -249892080 + GA-rich Low_complexity Low_complexity 1 39 0 211 317 98 55 chr2 3365931 3366095 -249890488 - MIR3 SINE MIR -32 176 6 242 222 14 28 chr2 3366793 3366865 -249889718 + CT-rich Low_complexity Low_complexity 2 72 0 203 200 0 40 chr2 3367484 3367534 -249889049 + C-rich Low_complexity Low_complexity 5 52 0 1123 293 43 5 chr2 3368096 3368536 -249888047 + MLT1C LTR MaLR 1 457 -10 2848 85 0 0 chr2 3368697 3369061 -249887522 + THE1B LTR MaLR 1 364 0 192 302 128 20 chr2 3369697 3369846 -249886737 + MIR3 SINE MIR 33 197 -11 236 221 143 0 chr2 3370314 3370391 -249886192 - MER5A DNA MER1_type -80 109 22 219 233 0 0 chr2 3372114 3372157 -249884426 + (CAT)n Simple_repeat Simple_repeat 3 45 0 227 255 0 0 chr2 3374366 3374417 -249882166 + PABL_B LTR ERV1 1 51 -616 272 336 96 64 chr2 3374455 3374767 -249881816 + PABL_A LTR ERV1 25 346 -314 820 229 36 32 chr2 3374938 3375191 -249881392 + PABL_B LTR ERV1 414 667 0 230 254 17 0 chr2 3375888 3375947 -249880636 + L3 LINE CR1 1515 1574 -3 771 170 7 22 chr2 3376664 3376799 -249879784 + FLAM_C SINE Alu 1 133 0 377 306 23 12 chr2 3376879 3377052 -249879531 - HAL1 LINE L1 -89 2418 2244 811 287 120 40 chr2 3377289 3378095 -249878488 - HAL1 LINE L1 -604 1903 1033 1319 119 39 153 chr2 3378099 3378459 -249878124 - L1MA4A LINE L1 0 6303 5985 900 216 42 0 chr2 3378722 3378912 -249877671 - MER58A DNA MER1_type -3 221 24 241 305 51 0 chr2 3379032 3379150 -249877433 - HAL1 LINE L1 -1777 730 607 277 344 2 11 chr2 3379259 3379370 -249877213 + MER5A DNA MER1_type 67 172 -6 226 277 161 15 chr2 3379931 3380068 -249876515 + MER110 LTR ERV1 307 463 -28 240 200 0 0 chr2 3381620 3381670 -249874913 + (TG)n Simple_repeat Simple_repeat 1 50 0 3268 84 34 2 chr2 3381928 3382366 -249874217 + MLT2A2 LTR ERVL 2 453 0 43778 78 13 4 chr2 3382366 3387970 -249868613 + HERVL-A2 LTR ERVL 1 5654 0 3094 97 26 29 chr2 3387970 3388381 -249868202 + MLT2A2 LTR ERVL 1 411 -42 198 0 0 0 chr2 3388381 3388403 -249868180 + (TA)n Simple_repeat Simple_repeat 2 23 0 375 23 0 0 chr2 3388409 3388453 -249868130 + (TC)n Simple_repeat Simple_repeat 1 44 0 3094 97 26 29 chr2 3388453 3388488 -249868095 + MLT2A2 LTR ERVL 416 453 0 1271 160 106 57 chr2 3388886 3389168 -249867415 - AluJo SINE Alu -16 296 1 489 279 132 11 chr2 3389675 3389865 -249866718 + MIR SINE MIR 50 262 0 1500 204 56 66 chr2 3390656 3391049 -249865534 + MLT1B LTR MaLR 1 389 -1 328 248 95 19 chr2 3391071 3391176 -249865407 - L1ME3A LINE L1 -223 5947 5835 1578 90 0 0 chr2 3393079 3393290 -249863293 - L1PA8 LINE L1 0 6172 5962 1841 122 38 94 chr2 3394024 3394079 -249862504 + THE1C LTR MaLR 1 58 -317 2373 94 7 0 chr2 3394079 3394387 -249862196 + AluSx SINE Alu 1 310 -2 1841 122 38 94 chr2 3394387 3394726 -249861857 + THE1C LTR MaLR 58 373 -2 299 132 0 19 chr2 3395247 3395300 -249861283 + THE1C LTR MaLR 124 175 -200 202 178 56 33 chr2 3396036 3396126 -249860457 + (TA)n Simple_repeat Simple_repeat 1 92 0 26 30 0 0 chr2 3396210 3396243 -249860340 + AT_rich Low_complexity Low_complexity 1 33 0 1124 110 12 18 chr2 3397250 3397413 -249859170 - AluJ SINE Alu -11 301 140 333 132 19 0 chr2 3397697 3397750 -249858833 + MSTA LTR MaLR 1 54 -374 239 185 0 37 chr2 3397766 3397820 -249858763 - AluJ SINE Alu -169 133 82 298 270 13 19 chr2 3398018 3398177 -249858406 + (TA)n Simple_repeat Simple_repeat 2 159 0 189 74 0 0 chr2 3398177 3398204 -249858379 + (GA)n Simple_repeat Simple_repeat 2 28 0 1771 126 0 39 chr2 3399174 3399384 -249857199 + Charlie3 DNA MER1_type 1 218 -2494 2735 93 11 13 chr2 3399384 3399760 -249856823 - THE1C LTR MaLR 0 375 1 1771 126 0 39 chr2 3399760 3399944 -249856639 + Charlie3 DNA MER1_type 218 2712 0 1399 204 37 74 chr2 3400361 3400764 -249855819 - MLT1B LTR MaLR -2 388 1 439 248 7 7 chr2 3400911 3401060 -249855523 + CT-rich Low_complexity Low_complexity 4 152 0 309 294 164 36 chr2 3401273 3401711 -249854872 + L1ME4a LINE L1 5448 5941 -180 200 83 0 28 chr2 3404099 3404135 -249852448 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 19646 55 1 1 chr2 3404135 3407341 -249849242 - L1PA5 LINE L1 -24 6130 2926 207 236 83 14 chr2 3408816 3408888 -249847695 + MIR SINE MIR 48 124 -138 288 250 14 19 chr2 3408896 3409050 -249847533 - MLT1J1 LTR MaLR -11 500 237 354 321 37 21 chr2 3409206 3409393 -249847190 - MLT1J2 LTR MaLR -254 196 7 208 356 22 0 chr2 3409402 3409492 -249847091 + MIR SINE MIR 166 257 -5 21 0 0 0 chr2 3409715 3409736 -249846847 + AT_rich Low_complexity Low_complexity 1 21 0 185 238 0 0 chr2 3409891 3409933 -249846650 + MIR SINE MIR 203 244 -18 1488 229 31 3 chr2 3411211 3411564 -249845019 - MLT1A1 LTR MaLR 0 365 3 2293 70 47 3 chr2 3411717 3412015 -249844568 + AluSq SINE Alu 1 311 -2 192 40 0 0 chr2 3412267 3412292 -249844291 + (CA)n Simple_repeat Simple_repeat 1 25 0 475 266 49 21 chr2 3412341 3412484 -249844099 - MIR SINE MIR -112 150 4 280 312 14 7 chr2 3412862 3413003 -249843580 + (TCTA)n Simple_repeat Simple_repeat 3 144 0 258 273 65 79 chr2 3414820 3414959 -249841624 + MIR SINE MIR 8 144 -118 5809 143 5 4 chr2 3416527 3417447 -249839136 - L1MA5 LINE L1 0 6300 5380 339 65 0 0 chr2 3418053 3418099 -249838484 + (TG)n Simple_repeat Simple_repeat 2 47 0 269 362 7 33 chr2 3420001 3420153 -249836430 - MIR SINE MIR -113 149 2 292 335 58 29 chr2 3420249 3420422 -249836161 + MIR SINE MIR 4 181 -81 809 119 0 84 chr2 3423078 3423221 -249833362 - L1PB4 LINE L1 -1 6155 6025 1295 193 89 50 chr2 3424119 3424456 -249832127 + MLT1B LTR MaLR 4 353 -37 374 271 25 8 chr2 3424733 3424851 -249831732 - L1ME3 LINE L1 -135 6027 5908 1925 251 75 56 chr2 3424857 3425045 -249831538 - L1MEc LINE L1 -3609 2606 2423 2205 114 7 0 chr2 3425045 3425343 -249831240 - AluSx SINE Alu -12 300 1 1925 251 75 56 chr2 3425343 3426511 -249830072 - L1MEc LINE L1 -3792 2423 1265 31 0 0 0 chr2 3427704 3427735 -249828848 + AT_rich Low_complexity Low_complexity 1 31 0 603 196 227 54 chr2 3429190 3429553 -249827030 - MLT1C LTR MaLR 0 390 1 289 310 90 19 chr2 3431493 3431761 -249824822 - LTR16C LTR ERVL -18 473 187 246 128 0 0 chr2 3432049 3432088 -249824495 + (TG)n Simple_repeat Simple_repeat 2 40 0 384 305 148 24 chr2 3432158 3432368 -249824215 - MIR SINE MIR -7 255 20 230 288 0 15 chr2 3433008 3433074 -249823509 - MIR SINE MIR -176 86 22 333 235 6 41 chr2 3433417 3433587 -249822996 + GA-rich Low_complexity Low_complexity 4 167 0 505 303 109 45 chr2 3433591 3434059 -249822524 - L2 LINE L2 -1686 1628 1131 208 326 57 7 chr2 3434080 3434221 -249822362 - L2 LINE L2 -2879 435 288 243 114 0 89 chr2 3434267 3434346 -249822237 + (TAATG)n Simple_repeat Simple_repeat 4 75 0 1352 271 130 23 chr2 3434389 3435041 -249821542 - L2 LINE L2 -2381 933 212 437 194 121 40 chr2 3435049 3435173 -249821410 - MER45A DNA AcHobo -35 143 10 199 268 177 30 chr2 3435202 3435366 -249821217 - L2 LINE L2 -3091 223 36 536 144 25 8 chr2 3436289 3436407 -249820176 + CT-rich Low_complexity Low_complexity 3 122 0 225 284 211 16 chr2 3436411 3436605 -249819978 + L2 LINE L2 1607 1838 -1476 1399 262 203 41 chr2 3436705 3437255 -249819328 + L2 LINE L2 2054 2513 -800 1707 166 3 18 chr2 3437255 3437570 -249819013 - AluSx SINE Alu 0 313 3 1399 262 203 41 chr2 3437570 3438051 -249818532 + L2 LINE L2 2513 3287 -26 1992 72 103 0 chr2 3440141 3440434 -249816149 + AluSp SINE Alu 1 320 0 15668 113 82 4 chr2 3440540 3440552 -249816031 - L1P LINE L1 -2149 3997 3987 9439 93 9 2 chr2 3440552 3442594 -249813989 - L1PA7 LINE L1 -3 6466 4427 15668 113 82 4 chr2 3442594 3443937 -249812646 - L1P LINE L1 -2159 3987 2751 396 0 0 0 chr2 3443937 3443981 -249812602 + (TA)n Simple_repeat Simple_repeat 2 45 0 15668 113 82 4 chr2 3443981 3445134 -249811449 - L1P LINE L1 -3395 2751 1291 414 103 0 0 chr2 3445131 3445189 -249811394 - L1PA7 LINE L1 -6393 68 11 * 3516 197 22 3 chr2 3445179 3445890 -249810693 - L1MB1 LINE L1 -190 5978 5254 1208 214 23 7 chr2 3445895 3446194 -249810389 - L1MB1 LINE L1 -3045 3101 2798 1157 264 32 19 chr2 3446194 3446508 -249810075 + MLT1E LTR MaLR 276 593 0 239 265 15 15 chr2 3447553 3447621 -249808962 + MIR SINE MIR 82 149 -113 192 158 0 0 chr2 3448844 3448882 -249807701 + CT-rich Low_complexity Low_complexity 2 39 0 860 275 36 20 chr2 3448942 3449193 -249807390 + MIR SINE MIR 5 259 -3 348 24 0 0 chr2 3449896 3449937 -249806646 + (TG)n Simple_repeat Simple_repeat 2 42 0 1440 282 123 17 chr2 3450645 3451180 -249805403 - MLT1E LTR MaLR 0 593 2 234 241 41 123 chr2 3451443 3451613 -249804970 + L2 LINE L2 2926 3081 -191 359 247 0 7 chr2 3451658 3451812 -249804771 + (CTA)n Simple_repeat Simple_repeat 1 153 0 288 289 117 0 chr2 3451893 3452021 -249804562 - MIR SINE MIR -8 254 112 2054 118 52 17 chr2 3452105 3452452 -249804131 + L1MA5A LINE L1 5936 6294 -3 234 244 219 24 chr2 3452663 3452786 -249803797 + MIR SINE MIR 115 261 -1 276 111 0 0 chr2 3456008 3456053 -249800530 + (CA)n Simple_repeat Simple_repeat 1 45 0 1629 140 61 0 chr2 3457749 3458013 -249798570 + L1PA15 LINE L1 5880 6159 -6 2076 113 0 0 chr2 3458272 3458628 -249797955 - AluSx SINE Alu 0 356 1 1639 248 101 30 chr2 3459007 3459883 -249796700 + Charlie2a DNA MER1_type 632 1610 -1252 250 240 11 70 chr2 3459945 3460068 -249796515 - MLT1H LTR MaLR -3 621 431 41 36 0 0 chr2 3460527 3460582 -249796001 + AT_rich Low_complexity Low_complexity 1 55 0 347 120 57 34 chr2 3460591 3460766 -249795817 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 25 0 0 0 chr2 3460773 3460798 -249795785 + AT_rich Low_complexity Low_complexity 1 25 0 232 97 56 14 chr2 3460818 3460890 -249795693 + (TATAA)n Simple_repeat Simple_repeat 5 79 0 33 43 0 0 chr2 3460913 3460960 -249795623 + AT_rich Low_complexity Low_complexity 1 47 0 257 250 38 50 chr2 3461295 3461375 -249795208 + MER5A DNA MER1_type 106 184 -5 187 246 211 0 chr2 3461556 3461613 -249794970 + L2 LINE L2 3233 3301 -12 997 152 5 91 chr2 3461613 3461811 -249794772 + AluJo SINE Alu 84 264 -48 2321 70 13 20 chr2 3461878 3462180 -249794403 + AluSc SINE Alu 3 302 -7 315 0 0 0 chr2 3462746 3462781 -249793802 + (CA)n Simple_repeat Simple_repeat 2 36 0 763 216 0 8 chr2 3463491 3463625 -249792958 + FLAM_A SINE Alu 1 133 0 466 252 25 0 chr2 3463855 3463974 -249792609 - Charlie8 DNA MER1_type -2250 167 46 1630 153 130 84 chr2 3464397 3464860 -249791723 - MER74A LTR ERVL -60 498 15 23 0 0 0 chr2 3466158 3466181 -249790402 + GC_rich Low_complexity Low_complexity 1 23 0 236 53 26 0 chr2 3467183 3467221 -249789362 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1535 176 47 0 chr2 3467228 3467506 -249789077 - AluJo SINE Alu -21 291 1 307 231 15 0 chr2 3467508 3467573 -249789010 - MIR SINE MIR -106 102 37 2169 111 14 0 chr2 3468828 3469125 -249787458 + AluSx SINE Alu 1 301 -11 450 155 0 0 chr2 3469467 3469538 -249787045 + Alu SINE Alu 218 288 -22 896 236 73 45 chr2 3469548 3469947 -249786636 + L1MC5 LINE L1 7508 7917 -44 1780 221 92 25 chr2 3469967 3470532 -249786051 + L1ME3A LINE L1 5554 6156 -14 31 0 0 0 chr2 3470533 3470564 -249786019 + AT_rich Low_complexity Low_complexity 1 31 0 1150 71 0 0 chr2 3470577 3470717 -249785866 + AluSq SINE Alu 33 172 -141 514 272 70 35 chr2 3471148 3471376 -249785207 - MIR SINE MIR -10 252 17 238 138 35 69 chr2 3472139 3472197 -249784386 - MLT1C LTR MaLR -411 56 1 904 191 0 0 chr2 3472800 3472957 -249783626 + FRAM SINE Alu 5 161 -5 1854 130 0 60 chr2 3474076 3474436 -249782147 - AluSx SINE Alu 0 342 1 2238 96 0 3 chr2 3474883 3475176 -249781407 - AluSx SINE Alu -3 309 18 2013 144 3 0 chr2 3475503 3475801 -249780782 - AluSx SINE Alu -13 299 1 422 281 111 79 chr2 3475819 3476172 -249780411 - L1MC5 LINE L1 -48 7913 7550 334 257 19 9 chr2 3476345 3476450 -249780133 - L1MC4 LINE L1 -1 8041 7936 347 284 74 7 chr2 3476455 3476603 -249779980 - L1MC4 LINE L1 -196 7846 7689 468 195 85 8 chr2 3476634 3476752 -249779831 - L1MC4 LINE L1 -582 7460 7334 278 252 53 73 chr2 3476757 3476834 -249779749 - L1MC4 LINE L1 -780 7262 7188 1866 166 0 13 chr2 3476834 3477136 -249779447 + AluJb SINE Alu 2 299 -13 278 252 53 73 chr2 3477136 3477209 -249779374 - L1MC4 LINE L1 -854 7188 7115 180 0 0 0 chr2 3477335 3477355 -249779228 + (A)n Simple_repeat Simple_repeat 1 20 0 1674 126 65 51 chr2 3477903 3478197 -249778386 - AluJb SINE Alu -14 298 1 236 143 102 0 chr2 3478746 3478795 -249777788 + L2 LINE L2 3248 3301 -12 2055 102 60 0 chr2 3479339 3479622 -249776961 + AluSx SINE Alu 1 300 -12 287 313 81 0 chr2 3479624 3479723 -249776860 - L2 LINE L2 -14 3299 3193 945 184 40 0 chr2 3479961 3480189 -249776394 + L1MA4 LINE L1 6060 6296 -4 287 212 61 30 chr2 3480430 3480496 -249776087 + MIR SINE MIR 34 101 -107 287 299 118 16 chr2 3480524 3480651 -249775932 + MIR SINE MIR 93 232 -30 399 184 0 0 chr2 3481205 3481292 -249775291 + GA-rich Low_complexity Low_complexity 4 90 0 2341 104 0 3 chr2 3481351 3481660 -249774923 + AluSc SINE Alu 1 308 -1 280 266 86 40 chr2 3482033 3482358 -249774225 + L1ME4a LINE L1 5665 6015 -106 1878 221 97 34 chr2 3483593 3484178 -249772405 - MLT1E3 LTR MaLR 0 624 3 1559 171 45 42 chr2 3484323 3484633 -249771950 + AluJo SINE Alu 1 311 -1 270 0 0 0 chr2 3484767 3484797 -249771786 + (CA)n Simple_repeat Simple_repeat 1 30 0 28 48 0 0 chr2 3485173 3485215 -249771368 + AT_rich Low_complexity Low_complexity 1 42 0 510 31 0 0 chr2 3485497 3485561 -249771022 + (CA)n Simple_repeat Simple_repeat 1 64 0 2343 88 0 23 chr2 3485871 3486179 -249770404 - AluSx SINE Alu -11 301 1 196 280 70 50 chr2 3486238 3486338 -249770245 - MIR SINE MIR -133 129 28 732 315 113 5 chr2 3487676 3488057 -249768526 + MER70B LTR ERVL 4 425 -153 351 0 0 0 chr2 3488093 3488132 -249768451 + (TA)n Simple_repeat Simple_repeat 1 39 0 665 292 56 9 chr2 3488483 3488699 -249767884 + MIR SINE MIR 14 239 -23 329 241 99 1 chr2 3488918 3489040 -249767543 - MLT1H1 LTR MaLR -1 554 408 472 228 37 29 chr2 3489129 3489265 -249767318 - MER58B DNA MER1_type -1 340 204 628 308 58 31 chr2 3489352 3489612 -249766971 - MLT1H1 LTR MaLR -288 267 1 1545 231 44 20 chr2 3490177 3490628 -249765955 - MLT1C LTR MaLR 0 467 6 194 0 39 0 chr2 3490742 3490768 -249765815 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2148 119 3 19 chr2 3491082 3491393 -249765190 + AluSx SINE Alu 1 306 -6 1935 166 7 0 chr2 3491529 3491830 -249764753 - AluSx SINE Alu -9 303 1 21 0 0 0 chr2 3492093 3492114 -249764469 + AT_rich Low_complexity Low_complexity 1 21 0 370 274 85 54 chr2 3492360 3492886 -249763697 + L1ME3 LINE L1 2086 2585 -3630 1111 282 80 32 chr2 3492934 3493850 -249762733 + L1M4 LINE L1 3923 4882 -1264 296 242 33 33 chr2 3494066 3494157 -249762426 + L1MC4 LINE L1 7473 7563 -479 836 258 107 59 chr2 3494220 3495159 -249761424 + L1ME3 LINE L1 4179 5162 -1053 8176 200 42 55 chr2 3495244 3497436 -249759147 + L1MA4 LINE L1 12 2233 -5332 279 0 0 0 chr2 3497436 3497467 -249759116 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 8176 200 42 55 chr2 3497467 3497665 -249758918 + L1MA4 LINE L1 2233 2432 -5133 1604 188 3 20 chr2 3497665 3497958 -249758625 + AluJb SINE Alu 1 288 -24 8176 200 42 55 chr2 3497958 3499134 -249757449 + L1MA4 LINE L1 2432 4205 -3360 1922 189 83 8 chr2 3499136 3499532 -249757051 + MSTB LTR MaLR 1 426 0 6981 214 49 5 chr2 3499534 3501109 -249755474 + MSTB-int LTR MaLR 3 1646 -5 645 200 0 0 chr2 3501111 3501236 -249755347 + MSTA LTR MaLR 1 125 -301 1593 102 159 8 chr2 3501240 3501581 -249755002 + LTR7 LTR ERV1 1 450 0 1099 175 123 26 chr2 3501581 3501844 -249754739 + MSTA LTR MaLR 140 428 0 924 198 18 0 chr2 3501844 3502061 -249754522 + L1MA4 LINE L1 4203 4423 -3142 1423 176 56 10 chr2 3502061 3502367 -249754216 - THE1C LTR MaLR 0 375 56 260 214 29 14 chr2 3502402 3502472 -249754111 - THE1C LTR MaLR -357 71 1 10527 179 25 27 chr2 3502475 3505232 -249751351 + L1MA4 LINE L1 4422 7186 -533 2378 81 0 7 chr2 3505232 3505541 -249751042 + AluY SINE Alu 2 308 -3 10527 179 25 27 chr2 3505541 3505938 -249750645 + L1MA4 LINE L1 7186 7561 -158 1062 104 31 0 chr2 3505938 3506101 -249750482 + L1PA10 LINE L1 5999 6166 -2 10527 179 25 27 chr2 3506101 3506236 -249750347 + L1MA4 LINE L1 7561 7695 -24 33 25 0 0 chr2 3506239 3506279 -249750304 + AT_rich Low_complexity Low_complexity 1 40 0 900 268 93 55 chr2 3506412 3507250 -249749333 + L1ME3 LINE L1 5351 6229 -2 29 28 0 0 chr2 3507503 3507539 -249749044 + AT_rich Low_complexity Low_complexity 1 36 0 2734 132 144 33 chr2 3507709 3508249 -249748334 - MER4A LTR ERV1 0 600 1 273 173 73 100 chr2 3508439 3508549 -249748034 + MLT1F LTR MaLR 3 109 -433 43 76 0 0 chr2 3508723 3508815 -249747768 + AT_rich Low_complexity Low_complexity 1 92 0 2392 100 0 0 chr2 3508881 3509182 -249747401 - AluSx SINE Alu -11 301 1 185 344 11 44 chr2 3511130 3511220 -249745363 + L2 LINE L2 3186 3272 0 21 82 0 0 chr2 3511401 3511450 -249745133 + AT_rich Low_complexity Low_complexity 1 49 0 2605 205 8 2 chr2 3511450 3512045 -249744538 - L1P LINE L1 -858 5288 4698 4585 152 19 14 chr2 3512048 3512878 -249743705 + L1PA16 LINE L1 5326 6159 -7 22 0 0 0 chr2 3512882 3512904 -249743679 + AT_rich Low_complexity Low_complexity 1 22 0 1874 143 49 0 chr2 3513056 3513343 -249743240 - AluSx SINE Alu -11 301 1 1088 170 50 14 chr2 3513390 3513608 -249742975 + MER101B LTR ERV1 1 226 -344 232 208 0 69 chr2 3513807 3513879 -249742704 + MER101B LTR ERV1 471 537 -33 1278 214 25 4 chr2 3514555 3514835 -249741748 + MER101B-int LTR ERV1 1 286 -6045 888 157 6 18 chr2 3514835 3515001 -249741582 + THE1C LTR MaLR 208 371 -4 6541 158 60 10 chr2 3515004 3516488 -249740095 + THE1C-int LTR MaLR 3 1580 0 1608 166 39 65 chr2 3516488 3516873 -249739710 + THE1C LTR MaLR 1 375 0 484 145 0 0 chr2 3516873 3516949 -249739634 - HSMAR2 DNA Mariner -582 720 645 1621 198 78 16 chr2 3516991 3517374 -249739209 - MLT2C2 LTR ERVL -57 407 1 189 196 0 0 chr2 3517526 3517572 -249739011 + (TGGA)n Simple_repeat Simple_repeat 3 48 0 216 182 0 0 chr2 3517577 3517621 -249738962 + GA-rich Low_complexity Low_complexity 1 44 0 25 75 0 0 chr2 3517825 3517878 -249738705 + AT_rich Low_complexity Low_complexity 1 53 0 1541 158 55 7 chr2 3518089 3518361 -249738222 - LTR32 LTR ERVL -166 305 21 1324 287 100 22 chr2 3518486 3518988 -249737595 - MLT1F LTR MaLR -1 541 1 320 333 60 20 chr2 3520638 3520788 -249735795 + MIR SINE MIR 19 174 -88 31 26 0 0 chr2 3521533 3521571 -249735012 + AT_rich Low_complexity Low_complexity 1 38 0 11966 217 71 27 chr2 3522034 3522785 -249733798 + L1MA8 LINE L1 1061 1778 -5473 2291 110 3 0 chr2 3522785 3523094 -249733489 + AluSg SINE Alu 1 310 0 11966 217 71 27 chr2 3523094 3524328 -249732255 + L1MA8 LINE L1 1778 2957 -4294 297 0 0 0 chr2 3524328 3524361 -249732222 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 1543 189 11 25 chr2 3524369 3524654 -249731929 - AluJo SINE Alu -31 281 1 11966 217 71 27 chr2 3524654 3525696 -249730887 + L1MA8 LINE L1 2963 3959 -3292 231 36 0 0 chr2 3525696 3525724 -249730859 + (TG)n Simple_repeat Simple_repeat 2 29 0 11966 217 71 27 chr2 3525724 3526228 -249730355 + L1MA8 LINE L1 3959 4440 -2811 387 0 0 0 chr2 3526228 3526271 -249730312 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2153 101 7 3 chr2 3526273 3526560 -249730023 - AluSx SINE Alu -24 288 1 11966 217 71 27 chr2 3526560 3529238 -249727345 + L1MA8 LINE L1 4440 7245 -6 477 288 22 84 chr2 3530798 3531024 -249725559 - MIR SINE MIR -21 241 30 27 81 0 0 chr2 3532060 3532122 -249724461 + AT_rich Low_complexity Low_complexity 1 62 0 286 292 15 8 chr2 3532872 3533002 -249723581 + (TA)n Simple_repeat Simple_repeat 2 132 0 255 338 23 15 chr2 3533148 3533281 -249723302 - MIR SINE MIR -108 154 21 222 303 118 17 chr2 3533375 3533494 -249723089 - MIR SINE MIR -57 151 21 231 120 101 38 chr2 3534458 3534616 -249721967 + (TATAA)n Simple_repeat Simple_repeat 5 172 0 208 167 42 24 chr2 3534619 3534787 -249721796 + (TTATA)n Simple_repeat Simple_repeat 4 174 0 22 70 0 0 chr2 3534789 3534832 -249721751 + AT_rich Low_complexity Low_complexity 1 43 0 246 174 33 16 chr2 3534893 3535014 -249721569 + (TA)n Simple_repeat Simple_repeat 1 123 0 23 33 0 0 chr2 3535019 3535049 -249721534 + AT_rich Low_complexity Low_complexity 1 30 0 218 152 53 20 chr2 3535061 3535212 -249721371 + (TTATA)n Simple_repeat Simple_repeat 4 159 0 575 171 0 0 chr2 3535233 3535344 -249721239 - L1MA4 LINE L1 -18 6282 6172 573 257 145 55 chr2 3535360 3536112 -249720471 + Charlie2 DNA MER1_type 1791 2610 -252 2269 86 0 3 chr2 3536198 3536489 -249720094 - AluSx SINE Alu -22 290 1 491 210 54 24 chr2 3536489 3536694 -249719889 + Charlie2 DNA MER1_type 2601 2811 -51 302 220 18 28 chr2 3537530 3537639 -249718944 + L1MA9 LINE L1 5983 6090 -222 21 71 0 0 chr2 3537736 3537778 -249718805 + AT_rich Low_complexity Low_complexity 1 42 0 334 297 16 16 chr2 3537872 3538054 -249718529 + HAL1 LINE L1 2044 2225 -282 735 176 0 0 chr2 3538171 3538296 -249718287 - AluJb SINE Alu -16 296 172 183 167 0 0 chr2 3538431 3538473 -249718110 + CT-rich Low_complexity Low_complexity 2 43 0 2417 88 0 0 chr2 3540012 3540317 -249716266 + AluSc SINE Alu 1 305 -4 308 260 20 103 chr2 3540430 3540576 -249716007 + L2 LINE L2 3180 3313 0 27 81 0 0 chr2 3540851 3540913 -249715670 + AT_rich Low_complexity Low_complexity 1 62 0 219 324 0 14 chr2 3540975 3541049 -249715534 + T-rich Low_complexity Low_complexity 5 77 0 2073 129 3 22 chr2 3541271 3541589 -249714994 - AluSx SINE Alu 0 312 1 2295 127 62 3 chr2 3541792 3542178 -249714405 + MLT2A2 LTR ERVL 1 409 -44 763 98 14 43 chr2 3542182 3542554 -249714029 + (TA)n Simple_repeat Simple_repeat 1 361 0 384 73 0 0 chr2 3542554 3542609 -249713974 + MLT2A2 LTR ERVL 399 453 0 1209 69 0 0 chr2 3542703 3542847 -249713736 - AluSp/q SINE Alu -9 304 161 437 135 0 0 chr2 3544290 3544364 -249712219 - L1MA7 LINE L1 0 6291 6218 1143 143 63 68 chr2 3544364 3544616 -249711967 + L1MA8 LINE L1 5619 5869 -422 198 231 0 0 chr2 3545788 3545827 -249710756 - MIR SINE MIR -107 155 117 1716 157 165 11 chr2 3546166 3546536 -249710047 - MSTA LTR MaLR -1 427 1 352 245 59 10 chr2 3549598 3549700 -249706883 - LTR40a LTR ERVL -105 414 308 361 212 186 17 chr2 3549892 3550010 -249706573 - LTR40a LTR ERVL -381 138 1 3870 204 70 7 chr2 3551096 3552073 -249704510 + L1PBa LINE L1 6 1043 -5820 402 180 50 0 chr2 3552069 3552218 -249704365 - L1PBa LINE L1 -5469 1394 1093 * 25 75 0 0 chr2 3552891 3552944 -249703639 + AT_rich Low_complexity Low_complexity 1 53 0 241 255 78 50 chr2 3553433 3553574 -249703009 + L1ME3A LINE L1 5798 5942 -228 1924 154 36 39 chr2 3554484 3554847 -249701736 + THE1B LTR MaLR 1 362 -2 765 203 20 11 chr2 3554883 3555135 -249701448 - MLT1B LTR MaLR -60 330 5 2217 78 0 0 chr2 3557990 3558319 -249698264 + AluY SINE Alu 1 329 0 206 366 41 24 chr2 3560664 3560787 -249695796 - MIR SINE MIR -118 144 20 819 307 3 27 chr2 3561216 3561545 -249695038 + L1MDa LINE L1 63 383 -6157 2539 204 76 39 chr2 3561605 3562482 -249694101 + L1MDa LINE L1 1613 2522 -4018 2557 166 144 11 chr2 3563279 3563835 -249692748 - L1PA16 LINE L1 -2 6164 5535 3390 29 0 0 chr2 3563939 3564353 -249692230 - L1PA5 LINE L1 -130 6024 5611 * 4307 220 38 36 chr2 3564349 3565570 -249691013 - L1PA16 LINE L1 -800 5346 4124 350 146 31 52 chr2 3565591 3565687 -249690896 + MLT1K LTR MaLR 491 584 -4 2351 105 13 0 chr2 3567436 3567741 -249688842 - AluSx SINE Alu -3 309 1 198 0 0 0 chr2 3568050 3568072 -249688511 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 245 330 52 10 chr2 3568824 3568921 -249687662 - L2 LINE L2 0 3272 3172 1022 69 0 7 chr2 3569070 3569215 -249687368 - L1P LINE L1 -3792 2354 2211 5067 41 3 3 chr2 3569215 3569820 -249686763 + L1PA5 LINE L1 5539 6153 -1 321 109 0 0 chr2 3570403 3570458 -249686125 + (A)n Simple_repeat Simple_repeat 1 55 0 356 203 80 129 chr2 3570462 3570625 -249685958 + L2 LINE L2 3159 3313 0 562 262 47 58 chr2 3570628 3570800 -249685783 - MIR SINE MIR -66 196 27 2302 99 0 40 chr2 3572851 3573174 -249683409 - AluSq SINE Alu -3 310 1 2118 137 45 31 chr2 3575539 3575719 -249680864 - THE1B LTR MaLR 0 364 188 2252 78 41 0 chr2 3575719 3576014 -249680569 - AluY SINE Alu -4 307 1 2118 137 45 31 chr2 3576014 3576192 -249680391 - THE1B LTR MaLR -176 188 1 842 141 88 0 chr2 3576212 3576382 -249680201 - L1MB3 LINE L1 -1 6182 5998 185 116 0 47 chr2 3576591 3576634 -249679949 + (TATATG)n Simple_repeat Simple_repeat 2 42 0 23 33 0 0 chr2 3576848 3576878 -249679705 + AT_rich Low_complexity Low_complexity 1 30 0 1103 279 42 5 chr2 3577212 3577639 -249678944 + L1MC1 LINE L1 3353 3795 -2351 1954 170 56 33 chr2 3577639 3578166 -249678417 - MLT2A2 LTR ERVL 0 554 1 1594 94 0 31 chr2 3578166 3578420 -249678163 - HERVL-A2 LTR ERVL 0 5654 5409 3428 133 68 22 chr2 3578420 3579005 -249677578 + LTR9 LTR ERV1 1 612 0 26621 171 41 46 chr2 3579026 3585987 -249670596 + HUERS-P3b LTR ERV1 22 6947 -471 800 160 11 11 chr2 3585991 3586166 -249670417 + HUERS-P3 LTR ERV1 3949 4123 -3693 540 194 8 15 chr2 3586157 3586291 -249670292 + HUERS-P3 LTR ERV1 2433 2565 -2450 * 894 111 62 0 chr2 3586445 3586589 -249669994 + HUERS-P3 LTR ERV1 8720 8872 -47 1828 166 45 24 chr2 3586589 3587056 -249669527 - MLT2A2 LTR ERVL -83 461 1 3981 236 28 21 chr2 3587061 3588345 -249668238 + L1MC1 LINE L1 3796 5088 -1058 262 270 20 30 chr2 3588363 3588463 -249668120 + MIR SINE MIR 139 237 -25 4372 171 47 39 chr2 3588487 3589663 -249666920 + L1MC1 LINE L1 5125 6310 -23 34 72 0 0 chr2 3589779 3589848 -249666735 + AT_rich Low_complexity Low_complexity 1 69 0 215 198 129 52 chr2 3589901 3589950 -249666633 - MIR SINE MIR -17 245 201 1713 178 22 73 chr2 3589950 3590361 -249666222 - MLT1B LTR MaLR 0 390 1 215 198 129 52 chr2 3590361 3590427 -249666156 - MIR SINE MIR -61 201 121 219 125 0 0 chr2 3590558 3590598 -249665985 + (CA)n Simple_repeat Simple_repeat 2 41 0 215 244 0 0 chr2 3590802 3590843 -249665740 - MER5B DNA MER1_type -132 46 6 234 0 0 0 chr2 3591440 3591466 -249665117 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 41026 34 21 2 chr2 3591466 3597491 -249659092 - L1PA3 LINE L1 -10 6145 1 198 243 229 0 chr2 3597805 3597875 -249658708 - MIR SINE MIR -6 256 171 716 321 111 14 chr2 3598741 3599099 -249657484 - L2 LINE L2 -318 2995 2606 340 191 24 0 chr2 3599475 3599559 -249657024 + (TAGA)n Simple_repeat Simple_repeat 1 86 0 673 298 108 20 chr2 3599658 3600058 -249656525 - L3 LINE CR1 -32 1545 1111 583 300 82 8 chr2 3600136 3600379 -249656204 - L2 LINE L2 -2830 484 224 297 284 39 39 chr2 3600379 3600534 -249656049 + LTR33 LTR ERVL 345 499 -22 192 259 107 71 chr2 3600763 3600875 -249655708 + L3 LINE CR1 345 460 -1117 41 21 0 0 chr2 3601251 3601299 -249655284 + AT_rich Low_complexity Low_complexity 1 48 0 276 379 73 10 chr2 3601578 3601784 -249654799 - L2 LINE L2 -721 2593 2375 358 266 32 96 chr2 3602290 3602478 -249654105 + MIR SINE MIR 35 210 -52 681 13 0 0 chr2 3603181 3603259 -249653324 + (GGAA)n Simple_repeat Simple_repeat 3 80 0 274 316 128 15 chr2 3604403 3604599 -249651984 + L1ME1 LINE L1 29 246 -6613 944 252 53 55 chr2 3604846 3605602 -249650981 + L1ME1 LINE L1 1215 1955 -4900 4455 252 105 52 chr2 3605616 3607053 -249649530 + L1ME1 LINE L1 2069 3428 -3549 2784 19 0 0 chr2 3607053 3607365 -249649218 + AluYb8 SINE Alu 1 312 -6 4455 252 105 52 chr2 3607365 3607466 -249649117 + L1ME1 LINE L1 3428 3522 -3455 2836 13 0 0 chr2 3607466 3607777 -249648806 + AluYa5 SINE Alu 1 311 0 4455 252 105 52 chr2 3607777 3608608 -249647975 + L1ME1 LINE L1 3522 4307 -2670 304 18 196 0 chr2 3608608 3608664 -249647919 - MADE1 DNA Mariner 0 80 14 4455 252 105 52 chr2 3608664 3608695 -249647888 + L1ME1 LINE L1 4307 4335 -2642 309 64 21 0 chr2 3608695 3608742 -249647841 + MADE1 DNA Mariner 31 78 -2 4455 252 105 52 chr2 3608742 3610599 -249645984 + L1ME1 LINE L1 4335 6827 -150 359 150 25 12 chr2 3610602 3610682 -249645901 + L1MB8 LINE L1 6097 6177 -1 3202 31 3 5 chr2 3610683 3611073 -249645510 + L1PA4 LINE L1 5766 6154 -1 197 339 0 0 chr2 3611186 3611242 -249645341 + MIR SINE MIR 85 140 -68 199 242 0 121 chr2 3612054 3612145 -249644438 + MIR SINE MIR 88 167 -95 305 276 48 129 chr2 3612254 3612758 -249643825 - L2 LINE L2 0 3272 2810 274 151 57 0 chr2 3613128 3613181 -249643402 - L2 LINE L2 0 3272 3217 249 191 154 29 chr2 3613430 3613566 -249643017 - L1ME4a LINE L1 -8 6113 5961 310 327 0 19 chr2 3613816 3613920 -249642663 - MIR SINE MIR -44 218 117 379 287 130 28 chr2 3613942 3614158 -249642425 - MIR SINE MIR -5 257 20 630 241 65 12 chr2 3615752 3615922 -249640661 - MER5A DNA MER1_type 0 189 11 2004 146 0 0 chr2 3615937 3616224 -249640359 - AluSx SINE Alu -25 287 1 1454 216 58 50 chr2 3616281 3616643 -249639940 - MLT1A1 LTR MaLR 0 365 1 280 292 20 119 chr2 3616914 3617116 -249639467 - MIR SINE MIR -79 183 2 191 143 20 51 chr2 3617156 3617254 -249639329 + (TA)n Simple_repeat Simple_repeat 1 95 0 208 277 0 0 chr2 3617321 3617368 -249639215 + L2 LINE L2 3200 3246 -26 181 286 208 31 chr2 3617366 3617558 -249639025 - L2 LINE L2 -2 3311 3086 * 734 197 48 69 chr2 3621105 3621293 -249635290 - MER20 DNA MER1_type 0 219 36 231 301 103 15 chr2 3621716 3621852 -249634731 - MLT1J2 LTR MaLR -20 430 283 24 0 0 0 chr2 3622036 3622060 -249634523 + AT_rich Low_complexity Low_complexity 1 24 0 2036 222 14 30 chr2 3622514 3623023 -249633560 - MLT1D LTR MaLR 0 505 5 1261 256 94 58 chr2 3623448 3624872 -249631711 + L1ME LINE L1 323 1813 -4448 321 250 100 17 chr2 3624870 3624990 -249631593 + L1M4 LINE L1 4119 4248 -1898 * 255 183 92 0 chr2 3625789 3625909 -249630674 + L1M4 LINE L1 4304 4434 -1712 555 263 98 44 chr2 3625915 3626231 -249630352 + L1ME LINE L1 1844 2176 -4085 22 0 0 0 chr2 3626973 3626995 -249629588 + AT_rich Low_complexity Low_complexity 1 22 0 878 286 119 11 chr2 3627867 3628244 -249628339 + LTR16C LTR ERVL 74 491 0 1815 254 106 89 chr2 3628385 3629544 -249627039 - MER69B DNA AcHobo -40 1186 8 230 200 0 33 chr2 3630051 3630111 -249626472 + L1MC4 LINE L1 6646 6703 -1339 593 88 0 0 chr2 3631489 3631569 -249625014 - MADE1 DNA Mariner 0 80 1 214 403 8 8 chr2 3632622 3632746 -249623837 - MIR SINE MIR -114 148 25 196 269 156 54 chr2 3633208 3633394 -249623189 + MIR SINE MIR 32 236 -26 287 340 47 0 chr2 3634416 3634522 -249622061 + MIR SINE MIR 31 141 -67 199 154 19 19 chr2 3634614 3634666 -249621917 + (TTA)n Simple_repeat Simple_repeat 3 54 0 219 277 91 130 chr2 3635301 3635709 -249620874 - L3 LINE CR1 -103 1474 1083 784 344 61 44 chr2 3636711 3637327 -249619256 + L1MEc LINE L1 802 1435 -4961 2421 117 17 6 chr2 3637327 3637687 -249618896 + THE1B LTR MaLR 1 364 0 784 344 61 44 chr2 3637687 3637825 -249618758 + L1MEc LINE L1 1435 1569 -4827 357 64 0 0 chr2 3637825 3637872 -249618711 - L1ME LINE L1 -477 5689 5643 1978 114 92 33 chr2 3637872 3638232 -249618351 + MSTA LTR MaLR 1 381 -47 337 219 27 0 chr2 3638269 3638342 -249618241 - L1ME LINE L1 -519 5647 5573 * 1142 258 35 29 chr2 3638336 3638712 -249617871 + L1ME3A LINE L1 5596 5973 -197 189 260 31 94 chr2 3639330 3639426 -249617157 + L2 LINE L2 2941 3030 -242 277 260 85 8 chr2 3641376 3641495 -249615088 - MIR SINE MIR -68 140 57 21 0 0 0 chr2 3641645 3641666 -249614917 + AT_rich Low_complexity Low_complexity 1 21 0 198 301 14 27 chr2 3642142 3642215 -249614368 + MIR SINE MIR 70 141 -121 237 246 79 44 chr2 3642258 3642372 -249614211 + MIR SINE MIR 140 257 -5 1902 157 10 3 chr2 3643686 3643992 -249612591 + AluSx SINE Alu 1 308 -4 396 283 83 21 chr2 3644159 3644304 -249612279 - MIR SINE MIR -37 225 72 907 185 67 6 chr2 3644978 3645156 -249611427 + MER5A DNA MER1_type 1 189 0 198 355 12 70 chr2 3645375 3645547 -249611036 + L2 LINE L2 2929 3090 -182 5968 177 32 37 chr2 3646156 3647299 -249609284 + L1MB1 LINE L1 3928 5062 -1106 2436 86 0 0 chr2 3647299 3647600 -249608983 - AluY SINE Alu -10 301 1 5968 177 32 37 chr2 3647600 3648622 -249607961 + L1MB1 LINE L1 5062 6087 -81 1562 206 107 28 chr2 3648629 3648932 -249607651 - MER70A LTR ERVL 0 472 130 1977 119 88 23 chr2 3648932 3649284 -249607299 + THE1C LTR MaLR 1 375 0 1562 206 107 28 chr2 3649284 3649373 -249607210 - MER70A LTR ERVL -342 130 49 1815 275 75 33 chr2 3649406 3650342 -249606241 + L1ME3A LINE L1 5188 6160 -10 200 139 13 114 chr2 3651065 3651144 -249605439 + T-rich Low_complexity Low_complexity 3 73 0 594 244 53 22 chr2 3651427 3651652 -249604931 - L1M4 LINE L1 -1498 4648 4417 2435 249 62 32 chr2 3651681 3652758 -249603825 + L1M4 LINE L1 4007 5115 -1031 1389 243 144 68 chr2 3653471 3653593 -249602990 - MLT1F1 LTR MaLR 0 567 456 2739 168 10 12 chr2 3653593 3654080 -249602503 + MER66B LTR ERV1 1 486 0 1389 243 144 68 chr2 3654080 3654484 -249602099 - MLT1F1 LTR MaLR -111 456 1 437 256 173 7 chr2 3654484 3654686 -249601897 + LTR50 LTR ERVL 272 590 -205 216 86 0 0 chr2 3654726 3654761 -249601822 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1144 90 13 0 chr2 3654762 3654918 -249601665 - LTR19A LTR ERV1 -41 445 288 566 250 114 5 chr2 3654921 3655141 -249601442 + LTR50 LTR ERVL 552 795 0 533 191 133 0 chr2 3656425 3656530 -249600053 + MLT1A2 LTR MaLR 1 119 -255 2134 96 4 0 chr2 3656681 3656953 -249599630 + AluY SINE Alu 26 298 -13 820 221 16 5 chr2 3656977 3657167 -249599416 + MLT1A2 LTR MaLR 181 372 -2 304 29 0 0 chr2 3657889 3657924 -249598659 - U2 snRNA snRNA -153 35 1 280 277 193 0 chr2 3657959 3658078 -249598505 - MIR SINE MIR -35 227 86 180 0 0 0 chr2 3658297 3658317 -249598266 + (A)n Simple_repeat Simple_repeat 1 20 0 209 268 24 37 chr2 3659642 3659724 -249596859 + L2 LINE L2 1918 1998 -1316 469 386 58 11 chr2 3659770 3660203 -249596380 + L2 LINE L2 723 1175 -2139 32 43 0 0 chr2 3660338 3660384 -249596199 + AT_rich Low_complexity Low_complexity 1 46 0 294 274 129 8 chr2 3661078 3661202 -249595381 - MIR3 SINE MIR -39 169 31 1429 181 24 38 chr2 3661866 3662158 -249594425 - AluJb SINE Alu -19 293 6 362 251 6 0 chr2 3662935 3663114 -249593469 + GA-rich Low_complexity Low_complexity 1 180 0 309 323 119 27 chr2 3663802 3664096 -249592487 - L1 LINE L1 -1318 4828 4508 21 36 0 0 chr2 3664140 3664168 -249592415 + AT_rich Low_complexity Low_complexity 1 28 0 596 294 110 30 chr2 3665722 3666157 -249590426 + L2 LINE L2 2434 2903 -411 478 321 67 30 chr2 3666164 3666432 -249590151 + HAL1 LINE L1 235 512 -1995 1217 134 19 14 chr2 3666433 3666649 -249589934 + THE1C LTR MaLR 159 375 0 10074 121 32 7 chr2 3666649 3668190 -249588393 + THE1C-int LTR MaLR 1 1580 0 2554 120 3 3 chr2 3668190 3668565 -249588018 + THE1C LTR MaLR 1 375 0 1243 246 54 31 chr2 3668616 3668965 -249587618 - MLT1A2 LTR MaLR 0 374 18 225 277 155 26 chr2 3668980 3669135 -249587448 + HAL1 LINE L1 2333 2507 0 189 325 45 57 chr2 3669250 3669407 -249587176 + L3 LINE CR1 900 1054 -523 314 255 113 19 chr2 3669456 3669562 -249587021 + MER63A DNA MER1_type 92 207 -3 183 129 0 0 chr2 3669871 3669902 -249586681 + (CA)n Simple_repeat Simple_repeat 2 32 0 182 387 84 0 chr2 3670169 3670288 -249586295 + L3 LINE CR1 1348 1476 -101 434 209 62 16 chr2 3671091 3671170 -249585413 + MLT1C LTR MaLR 1 90 -377 1253 191 38 107 chr2 3671170 3671562 -249585021 - MLT1A1 LTR MaLR 0 365 1 434 209 62 16 chr2 3671562 3671611 -249584972 + MLT1C LTR MaLR 90 135 -332 1047 197 33 44 chr2 3671627 3671779 -249584804 + MLT1C LTR MaLR 194 343 -124 1970 128 60 28 chr2 3671779 3672132 -249584451 - THE1B LTR MaLR 0 364 1 1047 197 33 44 chr2 3672132 3672253 -249584330 + MLT1C LTR MaLR 343 464 -3 368 325 145 21 chr2 3672253 3672721 -249583862 - L1 LINE L1 -1309 4837 4312 321 314 83 70 chr2 3672767 3673153 -249583430 - L1 LINE L1 -1906 4240 3850 1906 47 0 0 chr2 3673244 3673477 -249583106 + L1PA7 LINE L1 5919 6151 -3 2145 131 0 0 chr2 3673770 3674061 -249582522 + AluSx SINE Alu 1 291 -21 198 0 0 0 chr2 3674786 3674808 -249581775 + (TCTCC)n Simple_repeat Simple_repeat 5 26 0 197 331 0 66 chr2 3674811 3674932 -249581651 + L2 LINE L2 3013 3125 -188 1802 158 3 34 chr2 3674970 3675292 -249581291 + AluJb SINE Alu 1 312 0 180 0 0 0 chr2 3675829 3675849 -249580734 + (T)n Simple_repeat Simple_repeat 1 20 0 202 204 0 23 chr2 3676558 3676602 -249579981 + L2 LINE L2 3267 3309 -4 790 11 0 0 chr2 3676764 3676856 -249579727 - L1PA5 LINE L1 -270 5884 5793 1804 27 5 0 chr2 3676856 3677073 -249579510 + L1PA4 LINE L1 5935 6154 -1 681 216 14 56 chr2 3677327 3677540 -249579043 + MER3 DNA MER1_type 2 205 -4 2318 102 6 10 chr2 3677971 3678285 -249578298 + AluSq SINE Alu 1 313 0 26 0 0 0 chr2 3678361 3678387 -249578196 + AT_rich Low_complexity Low_complexity 1 26 0 768 213 26 31 chr2 3680386 3680633 -249575950 + L1MA9 LINE L1 6042 6285 -6 725 86 48 0 chr2 3681131 3681236 -249575347 - AluSg/x SINE Alu -12 298 189 193 349 77 31 chr2 3681284 3681479 -249575104 + L2 LINE L2 2565 2768 -546 2345 84 7 0 chr2 3681480 3681778 -249574805 - AluSg SINE Alu -5 305 6 21 71 0 0 chr2 3682182 3682224 -249574359 + AT_rich Low_complexity Low_complexity 1 42 0 223 304 72 0 chr2 3682507 3682576 -249574007 - MIR SINE MIR -91 171 98 338 293 136 0 chr2 3683177 3683317 -249573266 + MIR SINE MIR 103 261 -1 1657 238 41 19 chr2 3684027 3684511 -249572072 + MLT1D LTR MaLR 3 497 -8 2522 103 12 18 chr2 3684520 3684919 -249571664 + THE1B-int LTR MaLR 1184 1580 0 1945 136 14 33 chr2 3684919 3685280 -249571303 + THE1B LTR MaLR 1 354 -10 1973 266 35 38 chr2 3685286 3686124 -249570459 + MLT1D-int LTR MaLR 3 837 -534 296 229 84 0 chr2 3686136 3686219 -249570364 + L1M4 LINE L1 2638 2727 -3419 709 273 41 9 chr2 3686227 3686568 -249570015 - L1MEc LINE L1 -3558 2657 2306 * 737 247 13 31 chr2 3686561 3686788 -249569795 - L1MEc LINE L1 -6129 267 45 * 939 276 121 27 chr2 3686786 3687265 -249569318 + L1ME1 LINE L1 5593 6116 -50 1928 152 10 3 chr2 3687506 3687802 -249568781 + AluSx SINE Alu 1 298 -14 669 136 149 19 chr2 3687855 3688009 -249568574 - MSTA LTR MaLR -31 397 224 230 276 201 22 chr2 3688069 3688203 -249568380 - MIR SINE MIR -34 228 71 245 202 44 79 chr2 3688659 3688773 -249567810 + L1ME4a LINE L1 5550 5659 -462 5180 50 8 2 chr2 3688795 3689426 -249567157 + L1PA8 LINE L1 5520 6157 -15 279 0 0 0 chr2 3689426 3689457 -249567126 + (TA)n Simple_repeat Simple_repeat 2 32 0 5180 50 8 2 chr2 3689457 3689469 -249567114 + L1PA8 LINE L1 6157 6167 -5 218 357 48 0 chr2 3689591 3689675 -249566908 + L2 LINE L2 3091 3178 -94 2433 102 120 5 chr2 3690439 3690822 -249565761 + MSTA LTR MaLR 1 427 -1 2255 112 0 0 chr2 3690914 3691208 -249565375 - AluSg1 SINE Alu -15 294 1 304 256 0 26 chr2 3692658 3692736 -249563847 - MIR SINE MIR -119 143 68 452 315 164 6 chr2 3693115 3693439 -249563144 + L1ME4a LINE L1 5740 6114 -7 302 289 29 0 chr2 3693468 3693572 -249563011 - HAL1b LINE L1 -1 1347 1241 1902 158 6 16 chr2 3693577 3693888 -249562695 + AluJb SINE Alu 2 309 -3 346 287 42 75 chr2 3694310 3694575 -249562008 - L1M4 LINE L1 -2346 3800 3545 364 118 61 19 chr2 3694786 3695006 -249561577 + (TCTA)n Simple_repeat Simple_repeat 1 229 0 187 250 0 0 chr2 3695254 3695294 -249561289 + MER5A DNA MER1_type 128 167 -22 1238 145 108 0 chr2 3696264 3696505 -249560078 - L1MC1 LINE L1 -2 6331 6065 1061 268 34 54 chr2 3697329 3697863 -249558720 - MER119 DNA MER1_type -10 573 51 27 0 0 0 chr2 3697884 3697911 -249558672 + AT_rich Low_complexity Low_complexity 1 27 0 1653 163 73 12 chr2 3700283 3700626 -249555957 + MLT1A1 LTR MaLR 2 365 0 413 383 44 0 chr2 3701385 3701636 -249554947 + HERV16 LTR ERVL 1317 1578 -3418 899 317 37 24 chr2 3701667 3702603 -249553980 + HERV16 LTR ERVL 1674 2649 -2347 432 299 121 17 chr2 3702991 3703289 -249553294 - LTR16A LTR ERVL -106 344 16 341 340 95 16 chr2 3703638 3704011 -249552572 - ERVL LTR ERVL -528 4957 4674 725 225 31 0 chr2 3704012 3704172 -249552411 + MER45A DNA AcHobo 4 168 -10 2681 71 14 6 chr2 3704795 3705160 -249551423 + L1PB1 LINE L1 5777 6144 -7 46 19 0 0 chr2 3705318 3705371 -249551212 + AT_rich Low_complexity Low_complexity 1 53 0 9412 205 12 4 chr2 3705383 3707520 -249549063 - L1 LINE L1 -1777 5788 3636 5632 66 19 0 chr2 3707515 3708285 -249548298 - L1PA7 LINE L1 -1 6153 5369 * 21495 109 20 22 chr2 3708280 3712416 -249544167 - L1P3 LINE L1 -1892 4569 397 204 67 0 0 chr2 3712416 3712446 -249544137 + (CAA)n Simple_repeat Simple_repeat 2 31 0 21495 109 20 22 chr2 3712446 3712843 -249543740 - L1P3 LINE L1 -6064 397 1 11703 166 25 40 chr2 3712855 3715832 -249540751 - L1 LINE L1 -3938 3627 22 2178 96 6 13 chr2 3717230 3717543 -249539040 - AluY SINE Alu 0 311 1 370 232 111 0 chr2 3717791 3717890 -249538693 - MIR SINE MIR 0 262 153 326 221 15 0 chr2 3718551 3718619 -249537964 + L2 LINE L2 1178 1246 -2068 2093 127 0 3 chr2 3718619 3718919 -249537664 - AluSg SINE Alu -11 299 1 898 234 0 10 chr2 3718929 3719121 -249537462 - L1PB4 LINE L1 -3 6153 5964 830 168 0 0 chr2 3719137 3719256 -249537327 - FLAM_C SINE Alu -19 124 6 623 199 5 1 chr2 3719257 3719379 -249537204 - L1PB4 LINE L1 -194 5960 5835 2279 128 26 64 chr2 3719381 3719881 -249536702 - L1PB4 LINE L1 -422 5734 5254 430 109 0 0 chr2 3719895 3719959 -249536624 + L1 LINE L1 2957 3020 -3126 2140 228 11 17 chr2 3719959 3720490 -249536093 + L1 LINE L1 3327 3854 -2292 1855 300 134 50 chr2 3720492 3721887 -249534696 + L2 LINE L2 1258 2769 -545 242 263 0 84 chr2 3724105 3724200 -249532383 - MER5A DNA MER1_type -48 141 55 3430 57 40 2 chr2 3724825 3725279 -249531304 - L1PA8 LINE L1 -8 6164 5694 187 393 28 9 chr2 3726199 3726306 -249530277 + MER5A DNA MER1_type 2 110 -79 1477 128 30 8 chr2 3727150 3727384 -249529199 - MSTB1 LTR MaLR -1 431 193 23 33 0 0 chr2 3728583 3728613 -249527970 + AT_rich Low_complexity Low_complexity 1 30 0 39 0 0 0 chr2 3728912 3728951 -249527632 + AT_rich Low_complexity Low_complexity 1 39 0 214 290 48 0 chr2 3730782 3730844 -249525739 - MIR SINE MIR -100 162 98 314 250 24 12 chr2 3731020 3731104 -249525479 + L2 LINE L2 3226 3310 -3 287 319 61 52 chr2 3732074 3732303 -249524280 - MLT1K LTR MaLR -18 570 340 1412 123 21 16 chr2 3732841 3733084 -249523499 - L1MA6 LINE L1 -4 6296 6053 391 184 58 29 chr2 3733343 3733517 -249523066 + (CA)n Simple_repeat Simple_repeat 1 179 0 998 311 58 15 chr2 3733997 3734409 -249522174 - L2 LINE L2 -514 2800 2371 23 0 0 0 chr2 3735425 3735448 -249521135 + AT_rich Low_complexity Low_complexity 1 23 0 211 247 86 25 chr2 3735857 3735938 -249520645 + MIR SINE MIR 64 149 -113 496 288 29 62 chr2 3736193 3736467 -249520116 + L2 LINE L2 2200 2464 -850 1527 116 0 22 chr2 3736648 3736872 -249519711 + AluSx SINE Alu 1 219 -93 21 0 0 0 chr2 3738145 3738166 -249518417 + AT_rich Low_complexity Low_complexity 1 21 0 3642 221 20 7 chr2 3738180 3738892 -249517691 - MER44D DNA MER2_type 0 605 13 27 29 0 0 chr2 3739046 3739080 -249517503 + AT_rich Low_complexity Low_complexity 1 34 0 36 40 0 0 chr2 3739159 3739209 -249517374 + AT_rich Low_complexity Low_complexity 1 50 0 1659 256 34 34 chr2 3739238 3740118 -249516465 - L1ME1 LINE L1 -63 6103 4783 725 250 128 78 chr2 3740116 3740501 -249516082 - L1ME1 LINE L1 -1745 4401 3982 * 411 83 0 0 chr2 3740501 3740561 -249516022 + (TG)n Simple_repeat Simple_repeat 1 60 0 725 250 128 78 chr2 3740561 3740691 -249515892 - L1ME1 LINE L1 -2164 3982 3860 1623 228 19 71 chr2 3740691 3741209 -249515374 + MLT1D LTR MaLR 1 491 -14 2446 271 74 13 chr2 3741218 3742427 -249514156 - L1ME1 LINE L1 -2282 3864 2583 1173 257 136 83 chr2 3742771 3743011 -249513572 + MLT1E3 LTR MaLR 4 230 -394 1609 187 10 17 chr2 3743011 3743300 -249513283 + AluJo SINE Alu 1 287 -25 1173 257 136 83 chr2 3743300 3743647 -249512936 + MLT1E3 LTR MaLR 230 622 -2 228 305 32 7 chr2 3743706 3743860 -249512723 + L1M4 LINE L1 4533 4690 -1456 635 261 188 12 chr2 3745998 3746343 -249510240 - LTR50 LTR ERVL 0 795 390 241 238 109 30 chr2 3746346 3746447 -249510136 - LTR50 LTR ERVL -583 212 104 288 0 0 0 chr2 3746685 3746717 -249509866 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 283 313 46 28 chr2 3746939 3747156 -249509427 - LTR33 LTR ERVL 0 521 301 30 45 0 0 chr2 3747946 3747990 -249508593 + AT_rich Low_complexity Low_complexity 1 44 0 344 308 245 9 chr2 3748007 3748338 -249508245 + MLT1I LTR MaLR 1 409 0 2441 78 0 3 chr2 3748719 3749025 -249507558 + AluY SINE Alu 1 305 -6 349 329 83 23 chr2 3749228 3749444 -249507139 + MLT1J LTR MaLR 36 264 -247 183 139 0 0 chr2 3749444 3749480 -249507103 + (A)n Simple_repeat Simple_repeat 1 36 0 594 278 7 0 chr2 3749789 3749933 -249506650 + MIR SINE MIR 67 211 -51 392 386 48 21 chr2 3750208 3750545 -249506038 - L1MC/D LINE L1 -2000 5808 5463 1074 283 28 33 chr2 3750547 3750974 -249505609 + L1MCc LINE L1 14 438 -5985 1911 173 58 26 chr2 3751026 3751513 -249505070 + MLT2A2 LTR ERVL 1 516 -38 450 0 0 0 chr2 3751513 3751563 -249505020 + (TA)n Simple_repeat Simple_repeat 2 51 0 1911 173 58 26 chr2 3751563 3751604 -249504979 + MLT2A2 LTR ERVL 516 554 0 1237 276 115 15 chr2 3751828 3752564 -249504019 + L1MCc LINE L1 935 1747 -4887 368 203 183 110 chr2 3752568 3752814 -249503769 + LTR41 LTR ERVL 3 266 -507 22 0 0 0 chr2 3753152 3753174 -249503409 + AT_rich Low_complexity Low_complexity 1 22 0 729 302 38 21 chr2 3753333 3753621 -249502962 + L1MC4 LINE L1 6717 7009 -1033 307 312 110 41 chr2 3753805 3754031 -249502552 + L1MC4a LINE L1 7177 7495 -419 577 275 54 45 chr2 3754042 3754264 -249502319 - MER58A DNA MER1_type 0 224 1 230 289 0 0 chr2 3754508 3754560 -249502023 + polypurine Low_complexity Low_complexity 3 54 0 334 266 148 0 chr2 3755372 3755500 -249501083 + MIR SINE MIR 104 250 -12 1050 232 84 58 chr2 3755639 3755855 -249500728 - MLT1A2 LTR MaLR -15 359 129 2443 61 0 3 chr2 3755855 3756148 -249500435 + AluY SINE Alu 1 292 -19 1050 232 84 58 chr2 3756148 3756276 -249500307 - MLT1A2 LTR MaLR -245 129 6 546 259 96 93 chr2 3756273 3756796 -249499787 + MLT1L LTR MaLR 27 471 -40 * 224 122 24 0 chr2 3756797 3756838 -249499745 + (TG)n Simple_repeat Simple_repeat 1 42 0 190 358 15 60 chr2 3756978 3757112 -249499471 + L2 LINE L2 2880 3007 -265 329 317 145 6 chr2 3757492 3757836 -249498747 + L2 LINE L2 2547 2938 -376 348 180 16 0 chr2 3758037 3758098 -249498485 + Tigger5 DNA MER2_type 1 62 -2261 * 1073 182 10 10 chr2 3758096 3758299 -249498284 + Tigger5 DNA MER2_type 2062 2264 -59 1105 151 47 24 chr2 3758299 3758511 -249498072 - Tigger1 DNA MER2_type 0 2418 2202 936 138 0 63 chr2 3758492 3758666 -249497917 - Tigger1 DNA MER2_type -2255 163 1 * 374 180 0 0 chr2 3758666 3758727 -249497856 + Tigger5 DNA MER2_type 2263 2323 0 267 316 101 29 chr2 3758765 3758904 -249497679 + L2 LINE L2 3165 3313 0 243 329 0 12 chr2 3759122 3759207 -249497376 - L2 LINE L2 -3 3269 3186 22 35 0 0 chr2 3760388 3760417 -249496166 + AT_rich Low_complexity Low_complexity 1 29 0 233 283 58 80 chr2 3761051 3761189 -249495394 + L2 LINE L2 2619 2753 -561 31 58 0 0 chr2 3761618 3761670 -249494913 + AT_rich Low_complexity Low_complexity 1 52 0 963 151 0 0 chr2 3762151 3762502 -249494081 + (CA)n Simple_repeat Simple_repeat 2 352 0 3306 114 16 0 chr2 3762798 3763305 -249493278 + L1PA13 LINE L1 5634 6148 -15 1845 100 93 4 chr2 3763337 3763637 -249492946 + AluSx SINE Alu 1 312 0 220 273 146 64 chr2 3764289 3764399 -249492184 + L2 LINE L2 3133 3251 -21 24 0 0 0 chr2 3765509 3765533 -249491050 + AT_rich Low_complexity Low_complexity 1 24 0 3364 213 50 3 chr2 3769176 3769870 -249486713 + MER44D DNA MER2_type 1 599 -6 2157 116 0 3 chr2 3769918 3770238 -249486345 + AluSq SINE Alu 1 313 0 230 264 0 11 chr2 3770604 3770695 -249485888 + GA-rich Low_complexity Low_complexity 3 92 0 270 95 0 0 chr2 3771939 3771981 -249484602 + (TG)n Simple_repeat Simple_repeat 1 42 0 842 137 0 0 chr2 3771981 3772105 -249484478 - AluSg/x SINE Alu -33 279 156 751 67 0 29 chr2 3772612 3772716 -249483867 - AluSg1 SINE Alu -208 101 1 234 169 0 84 chr2 3772971 3773042 -249483541 - MLT1H LTR MaLR 0 549 478 693 288 45 0 chr2 3773388 3773586 -249482997 + MIR SINE MIR 56 262 0 209 185 15 0 chr2 3773588 3773653 -249482930 + (CTA)n Simple_repeat Simple_repeat 3 68 0 24 67 0 0 chr2 3773727 3773772 -249482811 + AT_rich Low_complexity Low_complexity 1 45 0 655 182 64 51 chr2 3774074 3774284 -249482299 + MLT1B LTR MaLR 173 390 0 719 230 143 15 chr2 3774475 3774740 -249481843 + MER46C DNA MER2_type 1 299 -39 271 258 44 38 chr2 3775197 3775356 -249481227 - L1MEc LINE L1 -1487 5053 4894 427 79 0 16 chr2 3775372 3775435 -249481148 + MADE1 DNA Mariner 1 62 -18 21 0 0 0 chr2 3775492 3775513 -249481070 + AT_rich Low_complexity Low_complexity 1 21 0 27 29 0 0 chr2 3775738 3775772 -249480811 + AT_rich Low_complexity Low_complexity 1 34 0 2222 109 3 0 chr2 3775908 3776211 -249480372 - AluSg SINE Alu -6 304 1 1972 151 0 0 chr2 3776217 3776521 -249480062 - AluSx SINE Alu -3 309 6 205 266 0 0 chr2 3776629 3776693 -249479890 + T-rich Low_complexity Low_complexity 1 64 0 668 311 28 21 chr2 3776720 3776983 -249479600 - L1MEc LINE L1 -2329 4211 3943 567 113 0 0 chr2 3776983 3777063 -249479520 + MADE1 DNA Mariner 1 80 0 668 311 28 21 chr2 3777063 3777188 -249479395 - L1MEc LINE L1 -2597 3943 3820 824 187 55 55 chr2 3777288 3777507 -249479076 + MER20 DNA MER1_type 1 219 0 683 260 82 86 chr2 3777521 3777752 -249478831 - L1MEc LINE L1 -2845 3695 3465 3607 146 30 8 chr2 3777752 3778408 -249478175 - L1MA8 LINE L1 0 6291 5621 683 260 82 86 chr2 3778408 3779095 -249477488 - L1MEc LINE L1 -3075 3465 2777 1490 167 53 61 chr2 3779095 3779473 -249477110 - THE1C LTR MaLR 0 375 1 8592 153 18 43 chr2 3779473 3781091 -249475492 - THE1C-int LTR MaLR 0 1580 3 1653 160 60 41 chr2 3781093 3781461 -249475122 - THE1C LTR MaLR 0 375 1 683 260 82 86 chr2 3781461 3781522 -249475061 - L1MEc LINE L1 -3763 2777 2715 1057 259 73 79 chr2 3781644 3783185 -249473398 - L1MEc LINE L1 -3918 2622 1128 214 191 0 0 chr2 3783903 3783945 -249472638 + T-rich Low_complexity Low_complexity 1 42 0 27 29 0 0 chr2 3784069 3784103 -249472480 + AT_rich Low_complexity Low_complexity 1 34 0 273 130 0 0 chr2 3784188 3784234 -249472349 - L1MEc LINE L1 -4897 1645 1600 * 1063 267 18 7 chr2 3784226 3784499 -249472084 - L1M4 LINE L1 -6108 276 1 272 346 0 0 chr2 3785097 3785201 -249471382 + CT-rich Low_complexity Low_complexity 3 106 0 363 108 0 77 chr2 3785986 3786051 -249470532 + MLT2B1 LTR ERVL 7 66 -348 638 191 0 20 chr2 3786193 3786340 -249470243 - L1MD1 LINE L1 0 6242 6099 1537 251 92 11 chr2 3786417 3786852 -249469731 - L1MEc LINE L1 -6068 472 3 22 0 0 0 chr2 3787051 3787073 -249469510 + AT_rich Low_complexity Low_complexity 1 22 0 715 140 0 0 chr2 3787112 3787219 -249469364 - AluSq/x SINE Alu -205 107 1 2306 173 28 16 chr2 3788164 3788591 -249467992 - Tigger2a DNA MER2_type 0 434 3 225 0 0 0 chr2 3789502 3789527 -249467056 + (T)n Simple_repeat Simple_repeat 1 25 0 2209 100 3 7 chr2 3789676 3789977 -249466606 - AluSx SINE Alu -12 300 1 2008 157 0 0 chr2 3790077 3790371 -249466212 + AluSg SINE Alu 1 294 -16 802 317 46 19 chr2 3790712 3791081 -249465502 + MLT1J LTR MaLR 113 491 -20 29 0 0 0 chr2 3792141 3792170 -249464413 + AT_rich Low_complexity Low_complexity 1 29 0 217 211 40 13 chr2 3792388 3792464 -249464119 + (CA)n Simple_repeat Simple_repeat 1 78 0 4134 150 37 6 chr2 3792464 3793185 -249463398 + MER49 LTR ERV1 171 914 -9 289 183 59 6 chr2 3793794 3793963 -249462620 + (TA)n Simple_repeat Simple_repeat 2 179 0 272 126 31 99 chr2 3794007 3794198 -249462385 + (TA)n Simple_repeat Simple_repeat 2 179 0 383 95 14 176 chr2 3794236 3794446 -249462137 + (TA)n Simple_repeat Simple_repeat 2 177 0 208 262 66 16 chr2 3794758 3794819 -249461764 + MIR SINE MIR 127 190 -72 32 43 0 0 chr2 3795154 3795200 -249461383 + AT_rich Low_complexity Low_complexity 1 46 0 266 197 197 70 chr2 3795423 3795456 -249461127 - MIR SINE MIR -10 252 225 928 176 88 123 chr2 3795456 3795831 -249460752 + MLT1A1 LTR MaLR 4 365 0 266 197 197 70 chr2 3795831 3795926 -249460657 - MIR SINE MIR -37 225 105 476 279 86 96 chr2 3795986 3796381 -249460202 - HAL1 LINE L1 -998 1509 1119 204 194 0 0 chr2 3796815 3796851 -249459732 + CT-rich Low_complexity Low_complexity 3 38 0 821 180 16 5 chr2 3796864 3797270 -249459313 + CT-rich Low_complexity Low_complexity 1 410 0 772 151 0 27 chr2 3797293 3797478 -249459105 + CT-rich Low_complexity Low_complexity 1 180 0 273 119 0 0 chr2 3797513 3797555 -249459028 + (TCCC)n Simple_repeat Simple_repeat 3 44 0 * 641 163 0 7 chr2 3797548 3797689 -249458894 + CT-rich Low_complexity Low_complexity 3 142 0 1076 128 0 6 chr2 3797813 3797935 -249458648 + (TTC)n Simple_repeat Simple_repeat 1 300 0 1076 128 0 6 chr2 3797935 3798115 -249458468 + (TTC)n Simple_repeat Simple_repeat 1 179 0 911 171 23 27 chr2 3798327 3798536 -249458047 - L1PA8 LINE L1 -13 6142 5937 1716 154 3 43 chr2 3798536 3798835 -249457748 + Tigger4(Zombi) DNA MER2_type 1215 1501 -1230 4478 59 10 0 chr2 3798835 3799412 -249457171 - L1PA8A LINE L1 -186 5945 5363 442 200 45 18 chr2 3799842 3799952 -249456631 - LTR37B LTR ERV1 -159 309 197 449 326 20 31 chr2 3800444 3800640 -249455943 - MER63A DNA MER1_type -16 194 1 189 302 48 56 chr2 3800749 3800875 -249455708 - MER5A DNA MER1_type -35 154 30 * 235 286 0 0 chr2 3800832 3800888 -249455695 + MER5A DNA MER1_type 128 183 -6 315 71 0 0 chr2 3801351 3801393 -249455190 + (TG)n Simple_repeat Simple_repeat 2 43 0 185 35 69 0 chr2 3802631 3802660 -249453923 + A-rich Low_complexity Low_complexity 2 32 0 480 48 0 0 chr2 3803534 3803597 -249452986 + (TG)n Simple_repeat Simple_repeat 2 64 0 21 71 0 0 chr2 3804485 3804527 -249452056 + AT_rich Low_complexity Low_complexity 1 42 0 2590 27 7 3 chr2 3806309 3806610 -249449973 - AluY SINE Alu -9 302 1 32 26 0 0 chr2 3806666 3806705 -249449878 + AT_rich Low_complexity Low_complexity 1 39 0 23 54 0 0 chr2 3807245 3807282 -249449301 + AT_rich Low_complexity Low_complexity 1 37 0 1318 192 64 20 chr2 3807980 3808277 -249448306 - AluJb SINE Alu 0 312 3 285 242 34 22 chr2 3808462 3808522 -249448061 + (TA)n Simple_repeat Simple_repeat 1 59 -121 1275 149 10 0 chr2 3808522 3808730 -249447853 + MER6B DNA MER2_type 1 210 0 285 242 34 22 chr2 3808730 3808847 -249447736 + (TA)n Simple_repeat Simple_repeat 59 180 0 276 266 50 65 chr2 3808855 3808994 -249447589 - L1ME1 LINE L1 -102 6064 5928 261 331 87 29 chr2 3808996 3809168 -249447415 + L2 LINE L2 1773 1954 -1360 272 390 89 46 chr2 3809211 3809493 -249447090 + L2 LINE L2 2948 3241 -31 21 36 0 0 chr2 3810057 3810085 -249446498 + AT_rich Low_complexity Low_complexity 1 28 0 1257 230 71 43 chr2 3810920 3811341 -249445242 + MLT1D LTR MaLR 1 433 -72 184 316 51 0 chr2 3811375 3811454 -249445129 + MIR3 SINE MIR 83 165 -43 181 322 17 17 chr2 3811482 3811541 -249445042 - L2 LINE L2 -4 3309 3251 255 79 0 0 chr2 3811861 3811899 -249444684 + (TG)n Simple_repeat Simple_repeat 2 39 0 25 0 0 0 chr2 3812134 3812159 -249444424 + AT_rich Low_complexity Low_complexity 1 25 0 340 332 118 16 chr2 3812228 3812601 -249443982 + MLT1L LTR MaLR 131 541 -74 1084 269 274 18 chr2 3813081 3813903 -249442680 - L1MC4 LINE L1 -205 7837 6806 378 230 18 9 chr2 3813908 3814021 -249442562 - L1MA4 LINE L1 -209 6091 5978 * 655 249 54 80 chr2 3814013 3814386 -249442197 - L1MC4 LINE L1 -1222 6820 6458 203 286 22 0 chr2 3815271 3815362 -249441221 + (TG)n Simple_repeat Simple_repeat 1 93 0 1001 127 0 6 chr2 3815563 3815625 -249440958 + (GGA)n Simple_repeat Simple_repeat 1 241 0 1001 127 0 6 chr2 3815625 3815806 -249440777 + (GGA)n Simple_repeat Simple_repeat 1 180 0 211 339 97 0 chr2 3816572 3816696 -249439887 - L2 LINE L2 -9 3304 3169 260 26 128 0 chr2 3816817 3816895 -249439688 + (TA)n Simple_repeat Simple_repeat 1 88 0 200 132 0 26 chr2 3817265 3817303 -249439280 + (CAAAAA)n Simple_repeat Simple_repeat 5 41 0 1873 166 27 48 chr2 3818279 3818839 -249437744 - MLT2A2 LTR ERVL 0 554 1 219 263 100 25 chr2 3818918 3818998 -249437585 - MIR SINE MIR -73 189 104 1462 196 85 24 chr2 3819330 3819671 -249436912 + MLT1A1 LTR MaLR 4 365 0 25 51 0 0 chr2 3820202 3820241 -249436342 + AT_rich Low_complexity Low_complexity 1 39 0 210 319 69 0 chr2 3820920 3820992 -249435591 + L2 LINE L2 2413 2489 -825 241 333 32 51 chr2 3821569 3821725 -249434858 + L2 LINE L2 2686 2838 -476 2220 133 30 25 chr2 3821959 3822321 -249434262 + THE1B LTR MaLR 1 364 0 259 355 44 24 chr2 3823660 3823879 -249432704 - MIR SINE MIR -26 236 17 1749 189 97 8 chr2 3823926 3824317 -249432266 - MSTA LTR MaLR 0 428 3 6613 203 107 15 chr2 3824319 3825831 -249430752 - MSTB-int LTR MaLR 0 1651 1 1949 194 65 5 chr2 3825831 3826233 -249430350 - MSTB LTR MaLR 0 426 1 1033 260 97 26 chr2 3826282 3826779 -249429804 - LTR10B LTR ERV1 0 547 16 2806 98 51 5 chr2 3827315 3827743 -249428840 + MLT2A2 LTR ERVL 1 448 -5 10254 109 4 12 chr2 3827746 3828115 -249428468 + THE1B-int LTR MaLR 5 375 -1205 1804 136 0 0 chr2 3828115 3828366 -249428217 - AluSc SINE Alu -9 300 50 10254 109 4 12 chr2 3828366 3829523 -249427060 + THE1B-int LTR MaLR 375 1519 -61 3097 99 18 14 chr2 3829524 3829966 -249426617 - MLT2A1 LTR ERVL 0 444 1 40172 87 10 2 chr2 3829967 3830400 -249426183 - HERVL-A1 LTR ERVL -1 5653 5225 236 53 26 0 chr2 3830400 3830438 -249426145 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 40172 87 10 2 chr2 3830438 3835614 -249420969 - HERVL-A1 LTR ERVL -429 5225 1 3095 101 9 11 chr2 3835614 3836059 -249420524 - MLT2A1 LTR ERVL 0 444 1 448 77 0 0 chr2 3836059 3836124 -249420459 + THE1B-int LTR MaLR 1516 1580 0 2088 132 51 28 chr2 3836124 3836480 -249420103 + THE1B LTR MaLR 1 364 0 255 287 77 56 chr2 3837407 3837550 -249419033 + MIR SINE MIR 117 262 0 24 67 0 0 chr2 3839142 3839187 -249417396 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr2 3839469 3839491 -249417092 + AT_rich Low_complexity Low_complexity 1 22 0 578 272 110 0 chr2 3839814 3840068 -249416515 - L1M4 LINE L1 -2804 3342 3061 228 306 52 31 chr2 3840124 3840317 -249416266 - L1M4 LINE L1 -3715 2431 2235 3624 185 13 46 chr2 3840339 3841237 -249415346 - L1MB3 LINE L1 -2 6181 5313 * 3664 218 63 46 chr2 3841236 3842348 -249414235 - L1MC3 LINE L1 -743 5403 5096 1869 179 0 10 chr2 3842348 3842661 -249413922 + AluJb SINE Alu 3 312 0 3664 218 63 46 chr2 3842661 3843463 -249413120 - L1MC3 LINE L1 -1050 5096 4309 1291 232 57 21 chr2 3843475 3843949 -249412634 - L1MC3 LINE L1 -2042 4104 3614 2207 85 4 0 chr2 3844055 3844381 -249412202 + AluY SINE Alu 1 327 0 376 309 49 19 chr2 3844389 3844551 -249412032 + MER5B DNA MER1_type 1 167 -11 2158 176 39 28 chr2 3846735 3847195 -249409388 + MLT1C LTR MaLR 1 465 -2 2345 244 64 26 chr2 3847411 3848280 -249408303 + L1ME2 LINE L1 5254 6155 -9 323 256 57 81 chr2 3848309 3848520 -249408063 + L1MC4 LINE L1 7829 8034 -8 491 231 144 5 chr2 3849391 3849586 -249406997 - L1MA9 LINE L1 -38 6274 6053 234 310 0 0 chr2 3851030 3851101 -249405482 + MLT1J LTR MaLR 229 299 -212 238 234 85 0 chr2 3852026 3852120 -249404463 + LTR33A LTR ERVL 408 509 -14 270 356 34 0 chr2 3853917 3854035 -249402548 + MIR SINE MIR 138 259 -3 1975 121 32 0 chr2 3854070 3854351 -249402232 - AluSc SINE Alu -4 305 16 252 340 19 19 chr2 3855721 3855827 -249400756 - MIR3 SINE MIR -88 120 15 254 364 93 0 chr2 3856082 3856222 -249400361 + MIR SINE MIR 108 260 -2 523 363 28 4 chr2 3856239 3856490 -249400093 - MIR SINE MIR 0 262 6 1547 273 99 56 chr2 3856954 3857813 -249398770 + L2 LINE L2 2153 3036 -277 1418 172 23 15 chr2 3857828 3858090 -249398493 - AluJb SINE Alu -48 264 1 552 238 166 14 chr2 3858294 3858517 -249398066 + MER69 DNA AcHobo 275 531 -695 546 265 99 7 chr2 3858627 3858778 -249397805 - MIR SINE MIR -89 173 9 297 291 72 11 chr2 3858870 3859030 -249397553 - MIR SINE MIR -63 199 32 243 133 0 0 chr2 3859945 3859990 -249396593 + (CAT)n Simple_repeat Simple_repeat 3 47 0 303 330 61 0 chr2 3862944 3863059 -249393524 - L2 LINE L2 -9 3263 3142 1634 136 42 33 chr2 3863970 3864492 -249392091 + MER50 LTR ERV1 1 729 -5 254 255 49 39 chr2 3866706 3866808 -249389775 - MIR SINE MIR -56 206 104 2117 174 58 7 chr2 3866883 3867330 -249389253 + L1MC2 LINE L1 5850 6319 -25 26 50 0 0 chr2 3867668 3867708 -249388875 + AT_rich Low_complexity Low_complexity 1 40 0 479 307 131 27 chr2 3868503 3868914 -249387669 + L1MCc LINE L1 799 1252 -5171 402 174 35 0 chr2 3868938 3869024 -249387559 + L1MCc LINE L1 2318 2657 -4285 986 273 96 25 chr2 3869029 3869985 -249386598 + L1ME1 LINE L1 1729 2697 -3518 565 241 12 48 chr2 3869985 3870151 -249386432 - FRAM SINE Alu -6 160 1 994 241 113 12 chr2 3870152 3870649 -249385934 + L1ME1 LINE L1 2916 3462 -2753 849 262 53 37 chr2 3870679 3871110 -249385473 + L1ME1 LINE L1 4143 4580 -1635 935 260 138 28 chr2 3871164 3871689 -249384894 + L1ME1 LINE L1 5327 5895 -340 237 33 0 0 chr2 3871704 3871734 -249384849 + (TA)n Simple_repeat Simple_repeat 2 31 0 530 269 54 16 chr2 3871888 3872074 -249384509 + L1ME1 LINE L1 5989 6181 -54 2291 105 3 0 chr2 3872127 3872433 -249384150 - AluSq SINE Alu -6 307 1 446 186 0 10 chr2 3873477 3873574 -249383009 + GA-rich Low_complexity Low_complexity 2 97 0 1460 196 49 63 chr2 3875590 3876018 -249380565 - L1MA8 LINE L1 -93 6198 5777 248 155 103 38 chr2 3875990 3876070 -249380513 + L1MA8 LINE L1 6207 6291 0 * 24 0 0 0 chr2 3876073 3876097 -249380486 + AT_rich Low_complexity Low_complexity 1 24 0 207 228 0 51 chr2 3876681 3876760 -249379823 + T-rich Low_complexity Low_complexity 1 75 0 225 213 0 0 chr2 3877427 3877474 -249379109 + LTR67 LTR ERVL 509 555 -2 252 0 0 0 chr2 3877846 3877874 -249378709 + (TG)n Simple_repeat Simple_repeat 1 28 0 514 268 205 0 chr2 3879154 3879359 -249377224 - MIR SINE MIR -1 261 15 560 313 131 55 chr2 3879432 3879851 -249376732 - MLT1K LTR MaLR -135 453 3 190 327 0 0 chr2 3881079 3881134 -249375449 - MIR SINE MIR -14 248 194 2198 201 13 19 chr2 3881347 3881815 -249374768 + MLT1C LTR MaLR 1 465 -2 22 0 0 0 chr2 3883785 3883807 -249372776 + AT_rich Low_complexity Low_complexity 1 22 0 560 267 56 0 chr2 3884572 3884733 -249371850 + MLT-int LTR MaLR 596 765 -970 258 215 0 0 chr2 3884779 3884844 -249371739 + MER89 LTR ERV1 30 94 -465 279 160 20 0 chr2 3884921 3884971 -249371612 - MER34 LTR ERV1 -491 51 1 252 259 62 36 chr2 3885488 3885600 -249370983 + MER117 DNA MER1_type 3 117 -80 295 322 82 14 chr2 3886451 3886743 -249369840 + L1MC3 LINE L1 3681 3992 -2154 277 257 18 9 chr2 3886767 3886880 -249369703 + (TA)n Simple_repeat Simple_repeat 1 114 0 455 264 96 44 chr2 3886921 3887171 -249369412 + L1MC3 LINE L1 4062 4324 -1822 1441 194 26 23 chr2 3887185 3887489 -249369094 - MLT1A1 LTR MaLR -7 358 54 245 263 18 0 chr2 3887489 3887546 -249369037 - MST-int LTR MaLR -540 1111 1054 2261 251 44 18 chr2 3887561 3888178 -249368405 - MLT1A1-int LTR MaLR -970 765 133 1392 143 20 29 chr2 3888178 3888347 -249368236 - MSTA LTR MaLR 0 428 260 2275 145 3 6 chr2 3888347 3888712 -249367871 + THE1B LTR MaLR 1 364 0 1392 143 20 29 chr2 3888712 3888786 -249367797 - MSTA LTR MaLR -168 260 187 886 152 20 51 chr2 3888846 3889043 -249367540 - MSTA LTR MaLR -237 191 1 765 160 15 0 chr2 3889047 3889178 -249367405 - MLT1A1-int LTR MaLR -1602 133 1 1772 174 32 12 chr2 3889179 3889519 -249367064 - MLT1A1 LTR MaLR 0 365 19 1637 210 38 0 chr2 3889994 3890341 -249366242 - MLT1A1 LTR MaLR -2 363 4 265 318 46 23 chr2 3890354 3890571 -249366012 + L1MC3 LINE L1 4379 4600 -1546 1183 261 57 46 chr2 3890726 3891414 -249365169 + L1MC3 LINE L1 5467 6146 -1664 186 43 0 0 chr2 3891414 3891437 -249365146 + (CATA)n Simple_repeat Simple_repeat 2 24 0 1183 261 57 46 chr2 3891437 3892478 -249364105 + L1MC3 LINE L1 6146 7174 -636 1804 138 4 8 chr2 3892478 3892738 -249363845 + AluSq SINE Alu 1 259 -54 1183 261 57 46 chr2 3892738 3892751 -249363832 + L1MC3 LINE L1 7174 7185 -625 222 37 0 0 chr2 3892751 3892778 -249363805 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1183 261 57 46 chr2 3892778 3893433 -249363150 + L1MC3 LINE L1 7185 7800 -10 290 154 66 55 chr2 3893631 3893722 -249362861 + L1ME3A LINE L1 6071 6162 -8 1784 178 3 0 chr2 3893734 3894027 -249362556 + AluJb SINE Alu 3 296 -16 5143 40 11 2 chr2 3894407 3895037 -249361546 - L1PA5 LINE L1 -4 6150 5515 365 239 0 22 chr2 3895182 3895274 -249361309 + L1MC4 LINE L1 6614 6703 -1339 382 102 87 0 chr2 3895277 3895404 -249361179 + (TA)n Simple_repeat Simple_repeat 1 138 0 1496 70 4 48 chr2 3895580 3895591 -249360992 - L1PA11 LINE L1 0 6174 6164 2234 92 0 22 chr2 3895591 3895906 -249360677 - AluSp SINE Alu -2 311 4 1496 70 4 48 chr2 3895906 3896124 -249360459 - L1PA11 LINE L1 -10 6164 5955 587 153 38 0 chr2 3896713 3896832 -249359751 - MLT1D LTR MaLR 0 505 396 318 26 0 0 chr2 3897658 3897697 -249358886 + (CA)n Simple_repeat Simple_repeat 2 40 0 273 330 21 0 chr2 3897770 3897864 -249358719 + L3 LINE CR1 790 885 -692 21 0 0 0 chr2 3898816 3898837 -249357746 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 3900140 3900165 -249356418 + AT_rich Low_complexity Low_complexity 1 25 0 252 0 0 0 chr2 3900434 3900462 -249356121 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 249 180 0 0 chr2 3900839 3900889 -249355694 + GA-rich Low_complexity Low_complexity 3 52 0 25 0 0 0 chr2 3901188 3901213 -249355370 + AT_rich Low_complexity Low_complexity 1 25 0 198 297 103 32 chr2 3902208 3902363 -249354220 + MIR SINE MIR 47 212 -50 234 0 0 0 chr2 3903827 3903853 -249352730 + (TG)n Simple_repeat Simple_repeat 1 26 0 251 263 13 40 chr2 3903859 3903935 -249352648 - MIR SINE MIR -115 147 74 443 296 100 71 chr2 3903985 3904265 -249352318 - L2 LINE L2 0 3313 3026 1387 253 31 14 chr2 3904615 3905038 -249351545 + MER63B DNA MER1_type 7 436 0 1508 43 5 0 chr2 3907410 3907598 -249348985 - AluY SINE Alu -4 307 119 29 0 0 0 chr2 3907708 3907737 -249348846 + AT_rich Low_complexity Low_complexity 1 29 0 26 74 0 0 chr2 3908293 3908347 -249348236 + AT_rich Low_complexity Low_complexity 1 54 0 21 36 0 0 chr2 3908369 3908397 -249348186 + AT_rich Low_complexity Low_complexity 1 28 0 191 402 12 12 chr2 3908489 3908571 -249348012 - MIR SINE MIR -161 101 20 3211 210 94 25 chr2 3908701 3909487 -249347096 - MER21B LTR ERV1 -11 852 13 193 320 154 0 chr2 3909491 3909569 -249347014 + L2 LINE L2 3164 3253 -19 3497 111 83 12 chr2 3909828 3910421 -249346162 - LTR24C LTR ERV1 0 635 1 5036 126 29 21 chr2 3910689 3911552 -249345031 - MER4D LTR ERV1 -2 870 1 2574 58 0 0 chr2 3911586 3911897 -249344686 + AluY SINE Alu 1 311 0 1404 277 25 11 chr2 3911963 3912407 -249344176 + Charlie1a DNA MER1_type 1 450 -1005 450 286 19 33 chr2 3912407 3912617 -249343966 + L1ME LINE L1 4574 4780 -1366 2904 143 24 24 chr2 3912649 3912769 -249343814 - MLT2A1 LTR ERVL 0 515 396 279 0 0 0 chr2 3912769 3912800 -249343783 + (TA)n Simple_repeat Simple_repeat 1 31 0 2904 143 24 24 chr2 3912800 3913186 -249343397 - MLT2A1 LTR ERVL -119 396 1 922 249 46 92 chr2 3913190 3913539 -249343044 - MLT1A2 LTR MaLR -21 353 21 904 178 51 0 chr2 3913557 3913714 -249342869 - MER72 LTR ERV1 -557 165 1 373 345 65 50 chr2 3913714 3914036 -249342547 + L1ME LINE L1 4966 5292 -854 240 254 17 0 chr2 3914093 3914152 -249342431 + GA-rich Low_complexity Low_complexity 1 60 0 297 341 75 26 chr2 3914191 3914575 -249342008 + L1ME LINE L1 5457 5859 -311 340 104 0 0 chr2 3914678 3914726 -249341857 - AluY SINE Alu -218 82 35 764 189 7 0 chr2 3914749 3914900 -249341683 - MLT1A2 LTR MaLR 0 390 237 182 387 32 8 chr2 3915014 3915138 -249341445 + MIR3 SINE MIR 14 140 -68 29 28 0 0 chr2 3915720 3915756 -249340827 + AT_rich Low_complexity Low_complexity 1 36 0 183 80 0 0 chr2 3916037 3916062 -249340521 + (TTTTG)n Simple_repeat Simple_repeat 5 29 0 363 271 66 36 chr2 3916083 3916249 -249340334 - L1ME LINE L1 -382 5739 5569 208 287 278 9 chr2 3916328 3916443 -249340140 + MER5A DNA MER1_type 44 189 0 346 303 10 0 chr2 3917131 3917230 -249339353 - MER5A DNA MER1_type -80 109 10 234 281 70 126 chr2 3917396 3917595 -249338988 + MIR SINE MIR 3 190 -72 2023 138 7 0 chr2 3919084 3919382 -249337201 + AluSx SINE Alu 2 301 -11 1870 118 47 4 chr2 3919860 3920139 -249336444 + AluSx SINE Alu 1 291 -21 464 254 114 55 chr2 3920156 3920214 -249336369 - MIR SINE MIR -2 260 207 252 86 0 0 chr2 3920214 3920249 -249336334 + (CA)n Simple_repeat Simple_repeat 2 36 0 464 254 114 55 chr2 3920249 3920426 -249336157 - MIR SINE MIR -55 207 11 28 0 0 0 chr2 3921564 3921592 -249334991 + AT_rich Low_complexity Low_complexity 1 28 0 185 298 48 0 chr2 3921748 3921832 -249334751 - L2 LINE L2 -2882 432 345 2272 256 44 50 chr2 3922433 3923091 -249333492 - L1MD3 LINE L1 -13 8400 7769 2812 6 0 10 chr2 3923091 3923404 -249333179 + AluY SINE Alu 1 310 -1 2272 256 44 50 chr2 3923404 3923592 -249332991 - L1MD3 LINE L1 -644 7769 7581 3351 138 27 0 chr2 3923595 3924317 -249332266 + L1P5 LINE L1 5053 5791 -360 219 114 0 0 chr2 3924323 3924358 -249332225 + (TA)n Simple_repeat Simple_repeat 2 36 0 263 104 0 21 chr2 3924361 3924409 -249332174 + L1P5 LINE L1 5784 5830 -321 2510 115 0 0 chr2 3924558 3924922 -249331661 + L1PB1 LINE L1 5788 6151 0 4379 248 75 43 chr2 3924929 3925054 -249331529 - L1MD3 LINE L1 -757 5807 5687 1382 213 10 30 chr2 3925054 3925350 -249331233 - AluJb SINE Alu -22 290 1 4379 248 75 43 chr2 3925350 3926653 -249329930 - L1MD3 LINE L1 -877 5687 6055 966 8 24 0 chr2 3926653 3926776 -249329807 + (TCTA)n Simple_repeat Simple_repeat 3 128 0 4379 248 75 43 chr2 3926776 3927503 -249329080 - L1MD3 LINE L1 -508 6056 5354 288 214 0 0 chr2 3927503 3927559 -249329024 - L1 LINE L1 -1329 5235 5180 25 31 0 0 chr2 3927575 3927607 -249328976 + AT_rich Low_complexity Low_complexity 1 32 0 6470 141 9 9 chr2 3927611 3929049 -249327534 - L1MA3 LINE L1 -1 7723 6287 * 9724 181 23 13 chr2 3929041 3930756 -249325827 - L1MA3 LINE L1 -5821 1744 13 4693 234 39 6 chr2 3930763 3932032 -249324551 - L1 LINE L1 -1364 6201 4892 285 200 0 17 chr2 3932030 3932090 -249324493 - L1M4c LINE L1 -6320 64 6 * 1405 291 43 33 chr2 3932075 3932885 -249323698 - L1MD3 LINE L1 -2181 4383 3566 238 125 18 36 chr2 3933521 3933577 -249323006 - L1MCc LINE L1 -6105 318 264 340 283 25 69 chr2 3933617 3933776 -249322807 - L1MD3 LINE L1 -5889 156 5 10287 90 5 16 chr2 3934021 3935797 -249320786 + L1P3 LINE L1 3875 5643 -511 298 38 0 113 chr2 3935796 3935849 -249320734 + L1PA7 LINE L1 6108 6154 0 * 391 244 41 32 chr2 3936913 3937036 -249319547 + MER5B DNA MER1_type 1 124 -54 375 23 0 0 chr2 3937161 3937205 -249319378 + (TG)n Simple_repeat Simple_repeat 1 44 0 1242 233 66 3 chr2 3937762 3938067 -249318516 + MLT1A1 LTR MaLR 1 324 -41 222 383 28 0 chr2 3938096 3938203 -249318380 + MIR SINE MIR 34 143 -65 202 307 93 21 chr2 3938398 3938538 -249318045 + L2 LINE L2 2671 2820 -494 355 333 32 43 chr2 3938584 3938770 -249317813 + MIR SINE MIR 8 191 -71 3073 223 55 43 chr2 3939251 3939941 -249316642 - L1MB5 LINE L1 -8 6166 5486 940 227 44 86 chr2 3939941 3940350 -249316233 - MSTD LTR MaLR 0 396 5 3073 223 55 43 chr2 3940350 3941357 -249315226 - L1MB5 LINE L1 -688 5486 4442 322 344 56 8 chr2 3943170 3943295 -249313288 + L2 LINE L2 3142 3272 0 312 262 76 81 chr2 3943367 3943577 -249313006 + L2 LINE L2 3101 3309 -4 453 293 6 17 chr2 3944736 3944917 -249311666 + C-rich Low_complexity Low_complexity 2 180 0 403 80 0 0 chr2 3945081 3945131 -249311452 - MER51B LTR ERV1 0 377 328 876 224 9 39 chr2 3945134 3945366 -249311217 - L1ME LINE L1 -370 6294 6070 523 272 76 31 chr2 3945372 3945596 -249310987 - MER2 DNA MER2_type -8 337 104 292 93 0 0 chr2 3945626 3945669 -249310914 + MADE1 DNA Mariner 38 80 0 486 217 47 9 chr2 3945678 3945784 -249310799 - MER2 DNA MER2_type -234 111 2 402 158 40 59 chr2 3945787 3945888 -249310695 - L1ME LINE L1 -610 6072 5974 725 141 0 8 chr2 3945888 3946016 -249310567 + (TTCC)n Simple_repeat Simple_repeat 3 129 0 3069 267 40 62 chr2 3946026 3947977 -249308606 - L1ME LINE L1 -743 5901 4067 607 291 36 40 chr2 3948061 3948536 -249308047 - L1ME LINE L1 -5195 1347 875 180 0 0 0 chr2 3948540 3948560 -249308023 + (TG)n Simple_repeat Simple_repeat 2 21 0 1923 178 15 3 chr2 3948560 3948902 -249307681 - MER7A DNA MER2_type -1 345 2 303 340 118 30 chr2 3948969 3949298 -249307285 - L1ME LINE L1 -5667 875 518 267 269 15 60 chr2 3949491 3949625 -249306958 - L1ME LINE L1 -6316 226 99 12859 160 43 11 chr2 3949879 3952223 -249304360 + Tigger1 DNA MER2_type 1 2418 0 285 326 11 42 chr2 3954113 3954253 -249302330 + MIR SINE MIR 2 139 -69 186 238 63 32 chr2 3954625 3954688 -249301895 + L3 LINE CR1 1479 1543 -34 247 280 140 11 chr2 3954713 3954806 -249301777 + L2 LINE L2 3199 3303 -10 457 139 40 0 chr2 3955036 3955137 -249301446 + (TATG)n Simple_repeat Simple_repeat 2 106 0 22 0 0 0 chr2 3955405 3955427 -249301156 + AT_rich Low_complexity Low_complexity 1 22 0 186 43 0 0 chr2 3956106 3956129 -249300454 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1886 176 3 0 chr2 3956767 3957069 -249299514 - AluJb SINE Alu -9 303 1 873 103 5 43 chr2 3957506 3957691 -249298892 + (GGAA)n Simple_repeat Simple_repeat 2 179 0 2328 97 0 3 chr2 3959416 3959725 -249296858 - AluSc SINE Alu -1 308 1 207 88 0 0 chr2 3960034 3960068 -249296515 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 233 254 0 0 chr2 3961230 3961289 -249295294 + MLT1K LTR MaLR 530 588 0 392 118 65 30 chr2 3961788 3961957 -249294626 + (TA)n Simple_repeat Simple_repeat 2 176 0 236 201 25 19 chr2 3961960 3962119 -249294464 + (TTATA)n Simple_repeat Simple_repeat 5 164 0 3276 55 19 3 chr2 3962227 3962772 -249293811 - L1P2 LINE L1 -431 5723 5171 1333 203 103 29 chr2 3963651 3963991 -249292592 - MLT1A1 LTR MaLR 0 365 1 349 212 0 50 chr2 3964270 3964368 -249292215 - MIR SINE MIR -64 144 68 591 183 25 0 chr2 3964735 3964855 -249291728 + MER58B DNA MER1_type 219 341 0 245 321 119 8 chr2 3966398 3966532 -249290051 + L2 LINE L2 3164 3312 -1 22 0 0 0 chr2 3966541 3966563 -249290020 + AT_rich Low_complexity Low_complexity 1 22 0 2501 68 0 3 chr2 3967004 3967314 -249289269 - AluY SINE Alu -2 309 1 4168 29 0 0 chr2 3967542 3968031 -249288552 + L1PA4 LINE L1 5664 6152 -3 1804 223 10 83 chr2 3968227 3968814 -249287769 + MER52A LTR ERV1 1207 1750 -5 1438 247 5 27 chr2 3968819 3969188 -249287395 + MLT1A1 LTR MaLR 3 363 -2 428 239 0 0 chr2 3969969 3970061 -249286522 - MIR3 SINE MIR -14 194 103 353 376 65 0 chr2 3971155 3971325 -249285258 + MIR SINE MIR 9 189 -73 299 65 22 0 chr2 3971666 3971712 -249284871 + (TC)n Simple_repeat Simple_repeat 2 48 0 327 136 0 0 chr2 3971748 3971807 -249284776 + (TGGA)n Simple_repeat Simple_repeat 3 61 0 418 231 115 13 chr2 3972354 3972510 -249284073 - MLT1K LTR MaLR -32 556 385 1090 215 88 61 chr2 3972730 3972763 -249283820 - MLT2D LTR ERVL -6 408 377 297 0 0 0 chr2 3972763 3972796 -249283787 + (TG)n Simple_repeat Simple_repeat 1 33 0 1090 215 88 61 chr2 3972796 3972807 -249283776 - MLT2D LTR ERVL -37 377 368 186 43 0 0 chr2 3972807 3972830 -249283753 + (GA)n Simple_repeat Simple_repeat 2 24 0 1090 215 88 61 chr2 3972830 3973105 -249283478 - MLT2D LTR ERVL -46 368 72 1808 144 28 0 chr2 3973105 3973389 -249283194 - AluSg SINE Alu -12 298 7 1090 215 88 61 chr2 3973389 3973463 -249283120 - MLT2D LTR ERVL -342 72 2 207 139 0 0 chr2 3973575 3973611 -249282972 + (CA)n Simple_repeat Simple_repeat 2 37 0 221 237 0 13 chr2 3974257 3974333 -249282250 + GA-rich Low_complexity Low_complexity 3 77 0 233 272 224 8 chr2 3974698 3974823 -249281760 - MIR SINE MIR -11 251 100 396 0 0 0 chr2 3975240 3975284 -249281299 + (CA)n Simple_repeat Simple_repeat 2 45 0 246 136 0 0 chr2 3975899 3975943 -249280640 + (TG)n Simple_repeat Simple_repeat 1 44 0 226 250 190 40 chr2 3976795 3976895 -249279688 + L2 LINE L2 3158 3272 0 2038 127 3 0 chr2 3977111 3977415 -249279168 + AluSx SINE Alu 1 305 0 243 264 77 0 chr2 3977520 3977611 -249278972 + L1ME LINE L1 86 183 -5887 1790 262 90 43 chr2 3977748 3978836 -249277747 + L1M4 LINE L1 3696 4834 -1312 908 249 49 42 chr2 3978849 3979167 -249277416 + L1ME LINE L1 3975 4298 -1782 2612 46 0 0 chr2 3979167 3979469 -249277114 - AluY SINE Alu -9 302 1 908 249 49 42 chr2 3979469 3979579 -249277004 + L1ME LINE L1 4298 4406 -1674 337 265 90 11 chr2 3979563 3979831 -249276752 + L1ME LINE L1 4957 5245 -835 * 555 271 16 0 chr2 3979905 3980154 -249276429 + L1ME LINE L1 5259 5605 -450 1749 178 35 22 chr2 3980460 3980830 -249275753 - THE1C LTR MaLR 0 375 1 315 349 84 21 chr2 3980985 3981223 -249275360 - MIR SINE MIR -9 253 1 245 345 12 0 chr2 3981360 3981444 -249275139 - L3 LINE CR1 -346 1231 1147 24 0 0 0 chr2 3982495 3982519 -249274064 + AT_rich Low_complexity Low_complexity 1 24 0 187 240 20 20 chr2 3982858 3982908 -249273675 - MIR SINE MIR -63 199 150 6313 93 12 1 chr2 3983719 3984700 -249271883 + L1PA8 LINE L1 5175 6165 -7 240 301 108 0 chr2 3984817 3984910 -249271673 - MIR SINE MIR -35 227 125 199 317 131 7 chr2 3985138 3985283 -249271300 - MIR SINE MIR -37 225 63 33 0 0 0 chr2 3986033 3986066 -249270517 + AT_rich Low_complexity Low_complexity 1 33 0 390 42 0 0 chr2 3989050 3989098 -249267485 + (CAATT)n Simple_repeat Simple_repeat 2 49 0 40462 34 27 1 chr2 3989435 3995430 -249261153 + L1PA2 LINE L1 1 6154 -1 2187 139 0 0 chr2 3997525 3997826 -249258757 - AluSx SINE Alu -9 303 3 246 242 180 31 chr2 3998903 3999031 -249257552 - MIR SINE MIR 0 262 116 336 48 0 0 chr2 3999754 3999796 -249256787 + (TG)n Simple_repeat Simple_repeat 2 43 0 234 292 43 31 chr2 4002321 4002482 -249254101 - L1ME LINE L1 -312 5858 5696 275 303 18 9 chr2 4003125 4003234 -249253349 - L1ME LINE L1 -513 5651 5542 272 288 30 0 chr2 4003236 4003368 -249253215 - L1ME LINE L1 -710 5454 5319 403 262 153 49 chr2 4003403 4004177 -249252406 - L1ME LINE L1 -816 5330 4477 792 298 40 3 chr2 4004362 4004688 -249251895 + LTR53 LTR ERVL 49 386 -133 1216 204 17 3 chr2 4004699 4004993 -249251590 - L1P LINE L1 -964 5182 4885 180 26 53 26 chr2 4004999 4005037 -249251546 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1335 188 21 77 chr2 4005278 4005708 -249250875 + LTR52 LTR ERVL 13 418 -3 611 252 107 22 chr2 4005712 4006030 -249250553 - L1M4 LINE L1 -551 5633 5289 * 967 230 48 79 chr2 4006024 4006424 -249250159 - L1M4 LINE L1 -789 5357 4973 1860 191 5 0 chr2 4006424 4006802 -249249781 - L1MB2 LINE L1 -2 6169 5790 967 230 48 79 chr2 4006802 4006896 -249249687 - L1M4 LINE L1 -1173 4973 4878 364 273 7 56 chr2 4008113 4008256 -249248327 - L2 LINE L2 -203 3069 2934 218 397 94 21 chr2 4008299 4008533 -249248050 - L2 LINE L2 -459 2855 2605 225 287 66 37 chr2 4009168 4009304 -249247279 + MIR SINE MIR 122 261 -1 219 232 0 0 chr2 4009794 4009850 -249246733 + (TTCA)n Simple_repeat Simple_repeat 1 56 0 1984 153 0 0 chr2 4010560 4010855 -249245728 - AluSx SINE Alu -15 297 3 373 273 105 14 chr2 4011983 4012126 -249244457 - L2 LINE L2 0 3313 3158 198 0 0 0 chr2 4012231 4012253 -249244330 + (TG)n Simple_repeat Simple_repeat 1 22 0 792 297 20 28 chr2 4012376 4012625 -249243958 - MIR SINE MIR -4 258 12 227 337 18 49 chr2 4013191 4013354 -249243229 + L2 LINE L2 2933 3090 -182 349 268 52 64 chr2 4013994 4014244 -249242339 - L1ME LINE L1 -312 5809 5563 22 88 0 0 chr2 4016619 4016676 -249239907 + AT_rich Low_complexity Low_complexity 1 57 0 373 251 53 68 chr2 4017427 4017728 -249238855 + L1MDb LINE L1 1191 1526 -5061 270 0 0 0 chr2 4017781 4017811 -249238772 + (CA)n Simple_repeat Simple_repeat 2 31 0 484 312 80 0 chr2 4018709 4018959 -249237624 + L1M4 LINE L1 1344 1613 -5246 955 246 90 52 chr2 4018982 4019426 -249237157 + L1M4 LINE L1 5633 6093 -864 820 205 12 89 chr2 4019434 4019692 -249236891 - LTR12 LTR ERV1 -239 475 238 8703 187 68 30 chr2 4020503 4022194 -249234389 + MER52A LTR ERV1 1 1755 0 202 200 0 0 chr2 4023216 4023256 -249233327 + MIR SINE MIR 185 224 -38 261 75 0 0 chr2 4023257 4023297 -249233286 + (GA)n Simple_repeat Simple_repeat 2 41 0 2346 100 3 0 chr2 4023473 4023773 -249232810 - AluSq SINE Alu -12 301 1 1826 188 6 6 chr2 4024003 4024354 -249232229 + L1 LINE L1 4410 4760 -1386 898 178 77 6 chr2 4024359 4024528 -249232055 - MLT1B LTR MaLR -202 188 8 262 274 264 0 chr2 4024618 4024724 -249231859 + L2 LINE L2 3180 3313 0 253 226 39 29 chr2 4025710 4025812 -249230771 + (CA)n Simple_repeat Simple_repeat 2 104 0 292 207 33 20 chr2 4025824 4025974 -249230609 + (CA)n Simple_repeat Simple_repeat 1 152 0 342 312 11 58 chr2 4026028 4026217 -249230366 + (CACG)n Simple_repeat Simple_repeat 1 180 0 * 442 261 6 30 chr2 4026097 4026262 -249230321 + (CA)n Simple_repeat Simple_repeat 1 161 0 306 333 0 0 chr2 4027667 4027775 -249228808 - MIR3 SINE MIR -8 200 93 245 185 15 31 chr2 4027924 4027989 -249228594 - MLT1E1 LTR MaLR -440 214 151 545 83 12 60 chr2 4027998 4028082 -249228501 - MADE1 DNA Mariner 0 80 1 378 61 0 0 chr2 4028200 4028249 -249228334 + (CA)n Simple_repeat Simple_repeat 2 50 0 411 333 15 0 chr2 4028621 4028753 -249227830 + L2 LINE L2 3136 3269 -3 563 329 118 34 chr2 4028894 4029260 -249227323 - L1MEc LINE L1 -4212 2184 1759 2256 92 0 0 chr2 4029260 4029544 -249227039 - AluSx SINE Alu -28 284 1 563 329 118 34 chr2 4029544 4029703 -249226880 - L1MEc LINE L1 -4637 1759 1615 21 0 0 0 chr2 4031233 4031254 -249225329 + AT_rich Low_complexity Low_complexity 1 21 0 723 222 28 113 chr2 4031341 4031661 -249224922 + MLT1C LTR MaLR 34 326 -141 331 282 139 19 chr2 4031927 4032193 -249224390 - HAL1b LINE L1 -21 1327 1030 383 276 173 28 chr2 4032218 4032472 -249224111 - HAL1b LINE L1 -523 825 535 489 272 51 0 chr2 4032524 4032682 -249223901 - HAL1b LINE L1 -701 647 482 254 329 0 0 chr2 4032788 4032864 -249223719 + CT-rich Low_complexity Low_complexity 3 78 0 1399 238 16 53 chr2 4033093 4033430 -249223153 + MLT2D LTR ERVL 50 373 -41 330 26 0 0 chr2 4033430 4033469 -249223114 + (CA)n Simple_repeat Simple_repeat 2 40 0 1399 238 16 53 chr2 4033469 4033510 -249223073 + MLT2D LTR ERVL 373 414 0 254 325 40 32 chr2 4035016 4035142 -249221441 + MIR SINE MIR 100 226 -36 1854 200 74 32 chr2 4035160 4035540 -249221043 - MSTD LTR MaLR 0 396 1 1828 192 61 0 chr2 4035545 4035905 -249220678 + MSTC LTR MaLR 4 385 -43 2041 224 41 5 chr2 4035905 4036316 -249220267 - MSTB LTR MaLR 0 426 1 2317 199 68 11 chr2 4036324 4036796 -249219787 - MSTB-int LTR MaLR -15 1636 1138 820 159 7 21 chr2 4037503 4037648 -249218935 + FLAM_C SINE Alu 1 143 0 1698 152 17 30 chr2 4037652 4037954 -249218629 + AluJb SINE Alu 1 298 -14 594 194 0 0 chr2 4038190 4038293 -249218290 - FLAM_C SINE Alu -39 104 2 25 31 0 0 chr2 4038801 4038833 -249217750 + AT_rich Low_complexity Low_complexity 1 32 0 29 78 0 0 chr2 4038933 4038997 -249217586 + AT_rich Low_complexity Low_complexity 1 64 0 289 281 99 9 chr2 4039233 4039367 -249217216 + L1ME LINE L1 11 442 -5954 201 74 0 0 chr2 4039556 4039583 -249217000 + (A)n Simple_repeat Simple_repeat 1 27 0 2158 114 0 25 chr2 4039903 4040220 -249216363 - AluY SINE Alu -2 309 1 21 0 0 0 chr2 4040229 4040250 -249216333 + AT_rich Low_complexity Low_complexity 1 21 0 1971 148 3 7 chr2 4040252 4040557 -249216026 - AluSx SINE Alu -8 304 1 674 103 0 0 chr2 4040583 4040670 -249215913 + AluS SINE Alu 1 87 -226 2097 75 8 0 chr2 4040884 4041150 -249215433 - AluSp SINE Alu -45 268 1 801 142 0 8 chr2 4041193 4041320 -249215263 + FLAM_C SINE Alu 13 138 -5 286 293 38 57 chr2 4041320 4041426 -249215157 + L2 LINE L2 3198 3301 -12 1437 169 0 4 chr2 4041426 4041657 -249214926 + AluSx SINE Alu 1 230 -82 246 316 26 0 chr2 4041709 4041785 -249214798 - MIR SINE MIR -138 124 47 970 195 0 26 chr2 4042158 4042348 -249214235 + AluJo SINE Alu 1 185 -127 180 97 0 0 chr2 4042637 4042668 -249213915 + (G)n Simple_repeat Simple_repeat 1 31 0 2255 113 0 0 chr2 4043049 4043349 -249213234 - AluSx SINE Alu -12 300 1 24 0 0 0 chr2 4043609 4043633 -249212950 + AT_rich Low_complexity Low_complexity 1 24 0 234 128 0 0 chr2 4043889 4043928 -249212655 + (CA)n Simple_repeat Simple_repeat 2 40 0 1946 138 10 3 chr2 4045921 4046212 -249210371 + AluSx SINE Alu 3 295 -17 25 0 0 0 chr2 4046214 4046239 -249210344 + AT_rich Low_complexity Low_complexity 1 25 0 472 273 67 7 chr2 4046387 4046537 -249210046 - MIR SINE MIR -14 248 90 503 108 0 27 chr2 4046537 4046611 -249209972 + AluS SINE Alu 2 73 -240 215 320 31 10 chr2 4046635 4046732 -249209851 + CT-rich Low_complexity Low_complexity 2 100 0 929 187 12 0 chr2 4047021 4047187 -249209396 - FAM SINE Alu 0 49 1 2243 99 0 0 chr2 4047423 4047756 -249208827 + AluSx SINE Alu 1 333 0 342 259 12 0 chr2 4047756 4047841 -249208742 + L1M4 LINE L1 4740 4825 -1321 1125 155 6 6 chr2 4047841 4048015 -249208568 + AluSx SINE Alu 1 174 -138 482 260 95 18 chr2 4048159 4048328 -249208255 + L1ME3A LINE L1 5952 6133 -37 1162 165 55 5 chr2 4048336 4048554 -249208029 + MER46A DNA MER2_type 1 229 -7 273 274 66 38 chr2 4048561 4048667 -249207916 + L1ME3A LINE L1 5901 6009 -161 255 188 109 31 chr2 4048880 4048944 -249207639 + MER5C DNA MER1_type 56 124 -200 212 266 38 0 chr2 4049118 4049197 -249207386 + A-rich Low_complexity Low_complexity 1 82 0 866 241 44 4 chr2 4049534 4049762 -249206821 - AluJo SINE Alu 0 312 76 761 182 0 15 chr2 4049869 4050001 -249206582 + AluJb SINE Alu 180 309 -3 284 247 0 0 chr2 4050071 4050144 -249206439 + (CCCTAA)n Simple_repeat Simple_repeat 5 77 0 5491 88 39 46 chr2 4050145 4051189 -249205394 + SVA Other Other 8 868 -590 455 329 15 14 chr2 4051227 4051445 -249205138 + CT-rich Low_complexity Low_complexity 1 218 0 224 187 22 22 chr2 4051498 4051589 -249204994 + CT-rich Low_complexity Low_complexity 3 93 0 384 219 62 27 chr2 4051912 4052058 -249204525 + L1ME4a LINE L1 5967 6117 -4 2147 110 3 10 chr2 4053718 4054017 -249202566 - AluSq SINE Alu -16 297 1 189 0 0 0 chr2 4054022 4054043 -249202540 + (T)n Simple_repeat Simple_repeat 1 21 0 21 0 0 0 chr2 4054740 4054761 -249201822 + GC_rich Low_complexity Low_complexity 1 21 0 549 146 37 0 chr2 4054942 4055024 -249201559 - FLAM SINE Alu -16 127 43 1099 112 0 13 chr2 4056039 4056191 -249200392 + AluSq/x SINE Alu 1 150 -163 354 23 0 0 chr2 4056311 4056354 -249200229 + (G)n Simple_repeat Simple_repeat 1 43 0 367 196 0 56 chr2 4057583 4057690 -249198893 - LTR41 LTR ERVL -11 762 662 945 91 0 0 chr2 4058043 4058164 -249198419 + AluSc SINE Alu 175 295 -14 2313 100 0 3 chr2 4058230 4058541 -249198042 + AluY SINE Alu 1 310 -1 2060 131 0 0 chr2 4058543 4058825 -249197758 + AluSx SINE Alu 1 316 0 208 88 0 0 chr2 4058825 4058859 -249197724 + (TAAAA)n Simple_repeat Simple_repeat 2 155 0 332 192 71 30 chr2 4059633 4059732 -249196851 - FLAM_C SINE Alu -7 126 24 29 70 0 0 chr2 4060607 4060664 -249195919 + AT_rich Low_complexity Low_complexity 1 57 0 804 218 14 0 chr2 4060669 4060816 -249195767 - FAM SINE Alu -36 149 1 444 179 36 12 chr2 4061136 4061220 -249195363 - MLT1E1 LTR MaLR -50 604 519 1701 182 3 16 chr2 4061866 4062002 -249194581 + AluJb SINE Alu 1 137 -175 2292 101 3 0 chr2 4062002 4062299 -249194284 + AluSq SINE Alu 1 298 -15 1701 182 3 16 chr2 4062299 4062470 -249194113 + AluJb SINE Alu 137 304 -8 2080 115 20 0 chr2 4062658 4062954 -249193629 + AluSx SINE Alu 1 302 -10 207 188 0 0 chr2 4063216 4063264 -249193319 + (TTA)n Simple_repeat Simple_repeat 2 49 0 834 162 78 24 chr2 4063276 4063443 -249193140 - AluJb SINE Alu -44 268 93 466 130 0 26 chr2 4063453 4063530 -249193053 + MLT1A1 LTR MaLR 291 365 0 2282 110 0 3 chr2 4063980 4064281 -249192302 + AluSg SINE Alu 1 300 -10 1971 141 38 0 chr2 4064320 4064610 -249191973 + AluSx SINE Alu 1 301 -11 918 169 39 0 chr2 4064610 4064764 -249191819 + AluSg/x SINE Alu 132 291 -19 446 273 72 24 chr2 4064765 4064974 -249191609 + L1MDb LINE L1 936 1154 -5255 187 224 90 30 chr2 4065045 4065112 -249191471 - MIR SINE MIR -158 104 34 845 183 0 0 chr2 4065648 4065790 -249190793 - FLAM_C SINE Alu -1 142 1 22 70 0 0 chr2 4065934 4065977 -249190606 + AT_rich Low_complexity Low_complexity 1 43 0 2517 157 37 5 chr2 4066124 4066557 -249190026 - L1MB4 LINE L1 -7 6173 5727 1659 159 21 14 chr2 4066775 4067065 -249189518 + AluJb SINE Alu 1 292 -20 1814 148 45 0 chr2 4067454 4067745 -249188838 - AluJb SINE Alu -8 304 1 305 260 95 41 chr2 4067747 4067916 -249188667 - L1M4 LINE L1 -3114 3032 2855 1367 81 0 6 chr2 4068095 4068269 -249188314 + AluSp SINE Alu 131 303 -10 263 77 51 0 chr2 4068931 4068970 -249187613 + HAL1 LINE L1 527 567 -1940 1030 429 98 0 chr2 4069164 4069439 -249187144 - AluSx SINE Alu 0 302 1 733 183 0 46 chr2 4069439 4069570 -249187013 + FAM SINE Alu 25 149 -36 267 267 160 61 chr2 4069672 4069803 -249186780 - L2 LINE L2 -1 3312 3169 1914 195 41 31 chr2 4069814 4070204 -249186379 + MSTD LTR MaLR 1 394 -2 1992 113 13 17 chr2 4070204 4070328 -249186255 + AluSg SINE Alu 12 135 -175 2229 84 3 20 chr2 4070328 4070625 -249185958 + AluY SINE Alu 1 292 -19 1992 113 13 17 chr2 4070625 4070800 -249185783 + AluSg SINE Alu 135 310 0 1014 230 5 0 chr2 4070820 4071007 -249185576 - MER5A DNA MER1_type 0 189 2 460 251 141 25 chr2 4071012 4071211 -249185372 - L2 LINE L2 -140 3173 2952 2930 43 32 3 chr2 4071318 4071705 -249184878 + SVA Other Other 1011 1407 0 197 244 24 0 chr2 4071705 4071746 -249184837 + L2 LINE L2 2773 2814 -500 1214 130 5 65 chr2 4071749 4071964 -249184619 - AluJo SINE Alu -4 308 107 650 88 0 0 chr2 4071974 4072054 -249184529 + AluSp/q SINE Alu 215 294 -19 * 706 172 9 9 chr2 4072053 4072169 -249184414 - AluJo SINE Alu -195 117 2 2372 95 3 0 chr2 4072222 4072518 -249184065 + AluSq SINE Alu 1 297 -16 1610 296 23 58 chr2 4072518 4073016 -249183567 - HERVL LTR ERVL -1231 4533 4045 1658 138 0 71 chr2 4073016 4073198 -249183385 - AluJo SINE Alu -16 296 139 2322 119 0 0 chr2 4073198 4073501 -249183082 + AluSg SINE Alu 1 303 -7 1658 138 0 71 chr2 4073501 4073601 -249182982 - AluJo SINE Alu -173 139 34 1610 296 23 58 chr2 4073601 4073953 -249182630 - HERVL LTR ERVL -1719 4045 3682 2201 94 0 0 chr2 4074193 4074468 -249182115 + AluSx SINE Alu 1 275 -37 203 0 0 36 chr2 4074472 4074500 -249182083 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 310 332 70 27 chr2 4074522 4074709 -249181874 + MIR SINE MIR 20 214 -48 1957 130 3 7 chr2 4075076 4075402 -249181181 - AluSx SINE Alu 0 325 1 32 43 0 0 chr2 4076331 4076377 -249180206 + AT_rich Low_complexity Low_complexity 1 46 0 1361 144 87 9 chr2 4077106 4077335 -249179248 - MSTA LTR MaLR 0 428 182 1340 69 0 0 chr2 4077346 4077506 -249179077 - L1PA7 LINE L1 -5 6149 5990 2425 69 3 13 chr2 4077514 4077820 -249178763 - AluSc SINE Alu -6 303 1 239 115 39 77 chr2 4077837 4077889 -249178694 - Alu SINE Alu -167 135 86 574 181 11 0 chr2 4078013 4078107 -249178476 - FAM SINE Alu -89 96 2 379 250 36 0 chr2 4079178 4079290 -249177293 - LTR16A1 LTR ERVL -15 442 327 2174 114 0 7 chr2 4079290 4079587 -249176996 + AluSx SINE Alu 1 295 -17 2456 212 105 23 chr2 4079651 4079856 -249176727 + L1MC4 LINE L1 7001 7188 -854 1852 230 146 13 chr2 4079856 4080378 -249176205 + MLT1E LTR MaLR 1 591 -2 2456 212 105 23 chr2 4080378 4080950 -249175633 + L1MC4 LINE L1 7188 7842 -200 333 118 0 0 chr2 4081167 4081185 -249175398 + (CA)n Simple_repeat Simple_repeat 1 69 0 333 118 0 0 chr2 4081185 4081236 -249175347 + (CA)n Simple_repeat Simple_repeat 2 52 0 204 67 0 0 chr2 4081253 4081283 -249175300 + (TCTA)n Simple_repeat Simple_repeat 4 33 0 608 101 0 0 chr2 4081327 4081406 -249175177 + AluS SINE Alu 2 80 -232 1069 150 0 0 chr2 4081856 4082016 -249174567 - AluSq SINE Alu -20 293 134 2469 71 0 0 chr2 4082016 4082313 -249174270 - AluY SINE Alu -14 297 1 2381 81 13 0 chr2 4082313 4082620 -249173963 - AluSx SINE Alu -1 311 1 28 0 0 0 chr2 4082621 4082649 -249173934 + AT_rich Low_complexity Low_complexity 1 28 0 465 291 92 0 chr2 4083287 4083428 -249173155 - MIR3 SINE MIR -10 198 45 286 232 63 42 chr2 4085759 4085854 -249170729 - HERVL LTR ERVL -1355 4299 4203 781 240 36 25 chr2 4085857 4086053 -249170530 + MIR SINE MIR 63 260 -2 1050 111 0 76 chr2 4086520 4086692 -249169891 + FRAM SINE Alu 1 159 -17 249 281 210 27 chr2 4086754 4086978 -249169605 - L2 LINE L2 -1104 2210 1946 387 339 125 19 chr2 4087323 4087739 -249168844 + L2 LINE L2 1745 2204 -1110 1365 143 0 31 chr2 4088414 4088637 -249167946 - AluSg/x SINE Alu -14 296 81 1550 176 116 147 chr2 4089064 4089152 -249167431 + L1MC5 LINE L1 6962 7051 -910 2109 113 26 22 chr2 4089152 4089463 -249167120 - AluSq SINE Alu -1 312 1 1550 176 116 147 chr2 4089463 4090287 -249166296 + L1MC5 LINE L1 7051 7846 -115 1257 287 16 3 chr2 4090460 4090774 -249165809 + LTR16A LTR ERVL 123 440 -10 354 204 108 32 chr2 4090777 4090870 -249165713 + HERV16 LTR ERVL 1985 2084 -2912 422 311 104 5 chr2 4090892 4091085 -249165498 + HERV16 LTR ERVL 2245 2456 -2540 844 276 97 47 chr2 4091098 4091479 -249165104 + HERV16 LTR ERVL 3314 3713 -2051 1174 76 139 0 chr2 4091481 4091653 -249164930 + MSTA LTR MaLR 1 196 -232 2193 120 0 0 chr2 4091655 4091954 -249164629 + AluSx SINE Alu 1 299 -13 247 218 0 0 chr2 4091955 4092010 -249164573 + L1MD2 LINE L1 1562 1616 -4924 1827 163 28 3 chr2 4092013 4092301 -249164282 + AluJb SINE Alu 1 295 -17 2739 196 175 19 chr2 4092355 4093252 -249163331 + L1MD2 LINE L1 1606 2642 -3898 2720 215 104 20 chr2 4093252 4093951 -249162632 + L1MD2 LINE L1 5969 6726 -27 300 236 0 113 chr2 4093980 4094047 -249162536 + MLT1K LTR MaLR 3 55 -533 2196 129 0 3 chr2 4094047 4094342 -249162241 + AluSx SINE Alu 1 294 -18 300 236 0 113 chr2 4094342 4094380 -249162203 + MLT1K LTR MaLR 55 96 -492 240 237 13 26 chr2 4094622 4094698 -249161885 + LTR67 LTR ERVL 472 546 -11 2162 131 0 0 chr2 4094705 4095017 -249161566 + AluSx SINE Alu 1 312 0 27 0 0 0 chr2 4095066 4095093 -249161490 + AT_rich Low_complexity Low_complexity 1 27 0 806 118 0 0 chr2 4095463 4095573 -249161010 - AluSg/x SINE Alu -18 292 183 11555 25 0 6 chr2 4095684 4097905 -249158678 + L1HS LINE L1 3951 6155 0 369 263 0 26 chr2 4097903 4098055 -249158528 + L1MC3 LINE L1 3646 3793 -2747 * 878 229 63 76 chr2 4098037 4098434 -249158149 + L1MC3 LINE L1 5271 5662 -878 3751 199 12 4 chr2 4098434 4099157 -249157426 + Tigger2 DNA MER2_type 1 729 -1989 1152 170 122 0 chr2 4099197 4099427 -249157156 + Tigger2 DNA MER2_type 2461 2718 0 10028 203 51 23 chr2 4099431 4100735 -249155848 + L1MC3 LINE L1 5665 7069 -1110 402 21 0 0 chr2 4100735 4100782 -249155801 + (TG)n Simple_repeat Simple_repeat 2 48 0 10028 203 51 23 chr2 4100782 4101909 -249154674 + L1MC3 LINE L1 7069 8163 -16 219 209 149 15 chr2 4101991 4102058 -249154525 + MIR SINE MIR 113 188 -74 225 253 63 13 chr2 4102086 4102165 -249154418 - MARNA DNA Mariner -108 478 396 * 266 215 152 0 chr2 4102108 4102187 -249154396 + MARNA DNA Mariner 133 223 -363 22 70 0 0 chr2 4102239 4102282 -249154301 + AT_rich Low_complexity Low_complexity 1 43 0 340 325 81 34 chr2 4102379 4102613 -249153970 + MIR SINE MIR 18 262 0 28 48 0 0 chr2 4102646 4102688 -249153895 + AT_rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr2 4102808 4102832 -249153751 + AT_rich Low_complexity Low_complexity 1 24 0 219 88 0 0 chr2 4103688 4103722 -249152861 + (GA)n Simple_repeat Simple_repeat 1 34 0 30 0 0 0 chr2 4104306 4104336 -249152247 + AT_rich Low_complexity Low_complexity 1 30 0 2124 140 0 3 chr2 4105596 4105904 -249150679 + AluSq SINE Alu 1 307 -6 2053 113 23 3 chr2 4105917 4106219 -249150364 + AluSg SINE Alu 1 308 -2 189 171 0 0 chr2 4106223 4106258 -249150325 + A-rich Low_complexity Low_complexity 1 35 0 612 134 0 0 chr2 4106280 4106362 -249150221 + FRAM SINE Alu 75 156 -20 3006 203 35 7 chr2 4106557 4107149 -249149434 - MSTB-int LTR MaLR -1042 609 1 2301 181 43 17 chr2 4107149 4107564 -249149019 - MSTB LTR MaLR 0 426 1 335 71 0 0 chr2 4107564 4107606 -249148977 + MSTC LTR MaLR 381 422 -6 1573 167 30 79 chr2 4107629 4107768 -249148815 + MLT2A2 LTR ERVL 52 196 -358 2477 70 0 6 chr2 4107768 4108081 -249148502 + AluY SINE Alu 1 311 0 1573 167 30 79 chr2 4108081 4108453 -249148130 + MLT2A2 LTR ERVL 196 554 0 333 0 0 0 chr2 4110933 4110970 -249145613 + (TC)n Simple_repeat Simple_repeat 2 38 0 647 258 75 0 chr2 4111189 4111375 -249145208 + MER63A DNA MER1_type 3 202 -8 30 0 0 0 chr2 4112095 4112125 -249144458 + AT_rich Low_complexity Low_complexity 1 30 0 258 224 0 0 chr2 4112435 4112520 -249144063 + CT-rich Low_complexity Low_complexity 1 85 0 283 289 52 82 chr2 4113339 4113474 -249143109 - MIR SINE MIR -13 249 119 21 57 0 0 chr2 4113603 4113638 -249142945 + AT_rich Low_complexity Low_complexity 1 35 0 2276 123 0 0 chr2 4114043 4114351 -249142232 + AluSg SINE Alu 1 308 -2 226 220 147 37 chr2 4114441 4114550 -249142033 + MIR SINE MIR 107 227 -35 2064 127 0 3 chr2 4115298 4115598 -249140985 - AluSq SINE Alu 0 313 15 207 0 0 0 chr2 4115601 4115624 -249140959 + (T)n Simple_repeat Simple_repeat 1 23 0 182 37 37 0 chr2 4117958 4117985 -249138598 + (TTTTTG)n Simple_repeat Simple_repeat 1 28 0 505 275 50 84 chr2 4118233 4118851 -249137732 - HAL1 LINE L1 -886 1621 1025 21 36 0 0 chr2 4118897 4118925 -249137658 + AT_rich Low_complexity Low_complexity 1 28 0 236 53 26 0 chr2 4119535 4119573 -249137010 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2049 70 0 77 chr2 4119576 4119876 -249136707 - AluY SINE Alu -34 277 1 2049 136 13 0 chr2 4120171 4120473 -249136110 + AluSx SINE Alu 3 308 -4 180 125 0 0 chr2 4121093 4121125 -249135458 + (CA)n Simple_repeat Simple_repeat 2 33 0 219 280 25 68 chr2 4121157 4121275 -249135308 - L2 LINE L2 -4 3309 3197 430 322 37 28 chr2 4122874 4123088 -249133495 - MIR SINE MIR -24 238 23 341 146 0 0 chr2 4124291 4124346 -249132237 + L1P5 LINE L1 5391 5445 -709 3451 55 2 0 chr2 4124355 4124789 -249131794 + L1PA5 LINE L1 5718 6152 -2 3334 188 120 5 chr2 4124800 4125568 -249131015 + L1MA8 LINE L1 5428 6283 -8 370 305 18 24 chr2 4126326 4126490 -249130093 - L1MD3 LINE L1 -5 7990 7828 330 67 317 0 chr2 4127129 4127189 -249129394 + MADE1 DNA Mariner 1 79 -1 181 278 0 0 chr2 4127764 4127800 -249128783 - L2 LINE L2 -16 3256 3221 432 248 58 7 chr2 4127882 4128019 -249128564 + L1M4 LINE L1 2436 2579 -3567 306 273 88 68 chr2 4128548 4128947 -249127636 + HAL1b LINE L1 68 474 -874 * 1846 284 89 30 chr2 4128944 4130468 -249126115 - L1MDa LINE L1 -1587 4819 3175 * 6099 218 37 14 chr2 4130464 4132520 -249124063 + L1MA4 LINE L1 4 2131 -4197 3445 83 0 0 chr2 4132520 4132964 -249123619 + MLT2A1 LTR ERVL 1 444 0 6099 218 37 14 chr2 4132964 4133606 -249122977 + L1MA4 LINE L1 2131 2756 -3572 5550 183 28 50 chr2 4133599 4134465 -249122118 + L1MA4 LINE L1 4061 4945 -1537 * 1949 117 25 3 chr2 4134465 4134825 -249121758 + AluSc SINE Alu 1 309 0 5550 183 28 50 chr2 4134825 4136380 -249120203 + L1MA4 LINE L1 4945 6425 -57 2281 87 0 3 chr2 4136380 4136667 -249119916 + AluY SINE Alu 3 288 -23 5550 183 28 50 chr2 4136667 4136718 -249119865 + L1MA4 LINE L1 6425 6476 -6 1231 266 85 23 chr2 4136753 4137415 -249119168 - L1MDa LINE L1 -3231 3175 2473 545 254 76 61 chr2 4137439 4138017 -249118566 - L1MDa LINE L1 -3984 2422 1836 307 214 0 95 chr2 4138023 4138149 -249118434 - L1MDa LINE L1 -4935 1471 1358 2084 74 0 0 chr2 4138149 4138419 -249118164 - L1PA6 LINE L1 0 6154 5885 502 308 44 54 chr2 4138456 4138953 -249117630 - L1MDa LINE L1 -5142 1267 776 2233 91 7 10 chr2 4140571 4140880 -249115703 - AluY SINE Alu -3 308 1 1390 210 35 11 chr2 4140885 4141171 -249115412 - AluJo SINE Alu -19 293 1 3923 262 64 48 chr2 4142955 4143845 -249112738 + L1MEc LINE L1 2078 2952 -3263 261 0 0 0 chr2 4143845 4143874 -249112709 + (CAA)n Simple_repeat Simple_repeat 2 30 0 3923 262 64 48 chr2 4143874 4145207 -249111376 + L1MEc LINE L1 2952 4287 -1928 2335 278 55 43 chr2 4145569 4145683 -249110900 + L1MCb LINE L1 3 114 -5931 1528 166 50 68 chr2 4145683 4146063 -249110520 - THE1C LTR MaLR 0 375 3 2335 278 55 43 chr2 4146063 4146984 -249109599 + L1MCb LINE L1 114 1050 -4995 581 281 64 54 chr2 4147010 4147479 -249109104 + MER77 LTR ERV1 53 603 -2 271 190 25 25 chr2 4147646 4147725 -249108858 + L1MCb LINE L1 1057 1135 -5429 627 41 0 31 chr2 4147788 4147886 -249108697 + (TCTA)n Simple_repeat Simple_repeat 3 97 0 2371 249 34 35 chr2 4147911 4149000 -249107583 + L1MCb LINE L1 2384 3471 -3093 2487 42 3 10 chr2 4149000 4149307 -249107276 - AluY SINE Alu -6 305 1 2371 249 34 35 chr2 4149307 4149529 -249107054 + L1MCb LINE L1 3471 3692 -2872 31556 36 34 2 chr2 4149542 4153459 -249103124 + L1P LINE L1 1 4044 -2102 1986 116 20 10 chr2 4153559 4153852 -249102731 - AluSq SINE Alu -17 296 1 269 282 14 0 chr2 4153995 4154066 -249102517 + MIR SINE MIR 126 197 -65 329 202 23 132 chr2 4155030 4155159 -249101424 - MER5B DNA MER1_type -58 120 6 23 0 0 0 chr2 4157627 4157650 -249098933 + AT_rich Low_complexity Low_complexity 1 23 0 32 0 0 0 chr2 4157948 4157980 -249098603 + AT_rich Low_complexity Low_complexity 1 32 0 276 30 0 0 chr2 4158092 4158125 -249098458 + (TG)n Simple_repeat Simple_repeat 2 34 0 1238 218 72 50 chr2 4158164 4158526 -249098057 - MLT1A2 LTR MaLR -1 373 4 1944 219 72 9 chr2 4158989 4159433 -249097150 - MER70A LTR ERVL 0 472 1 406 328 139 15 chr2 4159433 4159765 -249096818 - MLT1I LTR MaLR -36 373 1 453 323 111 49 chr2 4161048 4161435 -249095148 + L2 LINE L2 2504 2914 -400 367 315 49 27 chr2 4161515 4161699 -249094884 + L2 LINE L2 3122 3309 -4 23 0 0 0 chr2 4162188 4162211 -249094372 + AT_rich Low_complexity Low_complexity 1 23 0 289 322 21 10 chr2 4163578 4163680 -249092903 - MIR SINE MIR -66 142 40 189 242 145 0 chr2 4163807 4163869 -249092714 - MIR SINE MIR -105 103 33 2171 131 34 25 chr2 4164081 4164439 -249092144 - THE1B LTR MaLR -3 361 1 32 86 0 0 chr2 4164616 4164697 -249091886 + AT_rich Low_complexity Low_complexity 1 81 0 273 279 90 33 chr2 4165680 4165802 -249090781 - L2 LINE L2 -467 2847 2719 550 257 28 19 chr2 4165858 4166072 -249090511 - L1ME3 LINE L1 -2 6160 5945 339 247 12 0 chr2 4166087 4166168 -249090415 - L1ME3 LINE L1 -285 5885 5804 270 381 124 22 chr2 4166205 4166575 -249090008 - L2 LINE L2 -609 2705 2298 2893 59 0 5 chr2 4167106 4167495 -249089088 + L1PA7 LINE L1 5743 6129 -25 495 262 84 42 chr2 4168048 4168239 -249088344 - MLT1J2 LTR MaLR -251 199 1 315 0 0 0 chr2 4168598 4168633 -249087950 + (TG)n Simple_repeat Simple_repeat 2 36 0 199 133 44 0 chr2 4168687 4168732 -249087851 + CT-rich Low_complexity Low_complexity 2 48 0 2367 83 6 0 chr2 4170322 4170647 -249085936 + L1PA8 LINE L1 5843 6169 -3 2390 80 0 3 chr2 4171121 4171421 -249085162 + AluSc SINE Alu 1 299 -10 185 358 37 0 chr2 4173195 4173276 -249083307 + MIR SINE MIR 60 143 -119 474 163 0 0 chr2 4174370 4174462 -249082121 - MER53 DNA DNA -2 187 96 1809 239 38 50 chr2 4174574 4175481 -249081102 - L1M4 LINE L1 -2497 3649 2754 262 224 31 31 chr2 4175744 4175905 -249080678 + (TA)n Simple_repeat Simple_repeat 2 162 0 420 136 0 0 chr2 4176571 4176630 -249079953 - AluS SINE Alu -237 72 14 1822 175 14 0 chr2 4177405 4177702 -249078881 - AluJo SINE Alu -10 302 2 2636 20 0 3 chr2 4178337 4178636 -249077947 - AluY SINE Alu -13 298 1 285 51 0 0 chr2 4178905 4178944 -249077639 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 309 309 94 69 chr2 4179000 4179404 -249077179 + HAL1 LINE L1 770 1183 -1324 998 223 36 43 chr2 4179404 4179709 -249076874 + MLT1C LTR MaLR 1 303 -164 244 215 114 0 chr2 4179831 4179910 -249076673 + HAL1 LINE L1 1198 1285 -1222 403 253 114 6 chr2 4181045 4181203 -249075380 + MLT1J2 LTR MaLR 8 182 -268 345 238 30 40 chr2 4181202 4181303 -249075280 + MLT1J1 LTR MaLR 202 301 -145 * 329 236 46 78 chr2 4183360 4183563 -249073020 + MIR SINE MIR 44 247 -15 653 250 56 12 chr2 4184054 4184376 -249072207 - MSTD LTR MaLR -14 382 1 21 0 0 0 chr2 4184548 4184569 -249072014 + AT_rich Low_complexity Low_complexity 1 21 0 2172 85 0 11 chr2 4185097 4185379 -249071204 + AluSg SINE Alu 1 279 -31 565 100 0 0 chr2 4185843 4185923 -249070660 + MADE1 DNA Mariner 1 80 0 403 296 72 34 chr2 4186229 4186493 -249070090 + L2 LINE L2 737 1010 -2304 685 250 6 33 chr2 4186516 4186696 -249069887 - FAM SINE Alu 0 175 1 1048 329 68 68 chr2 4186704 4187717 -249068866 + L2 LINE L2 1747 2759 -555 240 377 32 13 chr2 4188317 4188471 -249068112 + L2 LINE L2 2797 2953 -361 21 0 0 0 chr2 4188471 4188492 -249068091 + AT_rich Low_complexity Low_complexity 1 21 0 325 153 14 56 chr2 4188629 4188701 -249067882 - MLT1G LTR MaLR -306 284 216 791 308 42 39 chr2 4189089 4189449 -249067134 - L2 LINE L2 -536 2778 2418 365 326 8 8 chr2 4189628 4189757 -249066826 + MER58A DNA MER1_type 4 132 0 238 267 33 0 chr2 4189766 4189826 -249066757 + MER58A DNA MER1_type 163 224 0 233 229 37 83 chr2 4191124 4191233 -249065350 + MLT1D LTR MaLR 6 109 -517 596 269 88 4 chr2 4191269 4191507 -249065076 + MLT1D LTR MaLR 180 437 -68 4385 237 36 23 chr2 4192505 4192594 -249063989 - Charlie1a DNA MER1_type -1319 1442 1356 2042 156 27 16 chr2 4192594 4192965 -249063618 - THE1C LTR MaLR 0 375 1 9264 134 30 41 chr2 4192965 4194560 -249062023 - THE1C-int LTR MaLR 0 1580 3 1382 201 88 28 chr2 4194562 4194916 -249061667 - THE1C LTR MaLR 0 375 1 4385 237 36 23 chr2 4194916 4196233 -249060350 - Charlie1a DNA MER1_type -1405 1356 13 264 204 32 65 chr2 4198212 4198305 -249058278 - MLT1J LTR MaLR -379 132 43 305 330 82 21 chr2 4198736 4198969 -249057614 + L1MEd LINE L1 563 809 -5310 191 259 0 12 chr2 4199092 4199173 -249057410 + (TA)n Simple_repeat Simple_repeat 1 80 0 342 246 54 42 chr2 4199233 4199400 -249057183 + L1MEd LINE L1 1014 1182 -4937 8386 29 0 0 chr2 4199597 4200630 -249055953 - L1PA3 LINE L1 -1236 4910 3878 7707 19 2 0 chr2 4200630 4201908 -249054675 + L1PA3 LINE L1 4918 6197 0 2323 78 0 0 chr2 4202013 4202295 -249054288 + AluSx SINE Alu 1 282 -30 2010 279 68 44 chr2 4202938 4203619 -249052964 + L1ME1 LINE L1 43 767 -5629 2497 71 0 3 chr2 4203619 4203930 -249052653 + AluY SINE Alu 1 310 -1 2010 279 68 44 chr2 4203930 4204455 -249052128 + L1ME1 LINE L1 767 1278 -5118 1781 181 0 7 chr2 4204462 4204765 -249051818 - AluSx SINE Alu -11 301 1 288 0 0 0 chr2 4204886 4204918 -249051665 + (A)n Simple_repeat Simple_repeat 1 32 0 1343 275 100 22 chr2 4204918 4206595 -249049988 + L1ME1 LINE L1 1624 3426 -2789 900 237 111 45 chr2 4206583 4206630 -249049953 + L1ME1 LINE L1 4525 4567 -1648 * 222 118 0 0 chr2 4206630 4206664 -249049919 + (CA)n Simple_repeat Simple_repeat 1 34 0 900 237 111 45 chr2 4206664 4207131 -249049452 + L1ME1 LINE L1 4567 5073 -1142 905 158 0 0 chr2 4207135 4207268 -249049315 + AluSq/x SINE Alu 1 133 -180 1592 266 46 59 chr2 4207372 4208519 -249048064 + L1ME1 LINE L1 5109 6230 -5 1866 168 0 7 chr2 4208658 4208956 -249047627 + AluJb SINE Alu 1 296 -16 216 0 0 0 chr2 4208960 4208984 -249047599 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 490 277 94 24 chr2 4209340 4209631 -249046952 + L1ME3A LINE L1 5616 5922 -256 2167 135 0 0 chr2 4209713 4210010 -249046573 + AluSx SINE Alu 1 297 -15 2669 39 0 0 chr2 4210232 4210537 -249046046 + AluY SINE Alu 1 305 -6 1516 218 120 30 chr2 4210826 4211318 -249045265 - MER68 LTR ERV1 -4 558 23 259 282 57 16 chr2 4212145 4212269 -249044314 - L1ME4a LINE L1 -47 6074 5946 234 174 0 0 chr2 4212291 4212337 -249044246 + (TA)n Simple_repeat Simple_repeat 1 46 0 195 162 0 0 chr2 4213448 4213485 -249043098 + (TATG)n Simple_repeat Simple_repeat 4 40 0 184 250 115 0 chr2 4213905 4213957 -249042626 + L2 LINE L2 3117 3174 -98 188 336 75 15 chr2 4214461 4214595 -249041988 - MIR3 SINE MIR -35 173 32 2223 106 3 0 chr2 4214848 4215141 -249041442 + AluSq SINE Alu 1 294 -19 416 394 33 21 chr2 4215527 4215862 -249040721 + L3 LINE CR1 1084 1422 -155 23 33 0 0 chr2 4216442 4216472 -249040111 + AT_rich Low_complexity Low_complexity 1 30 0 25 51 0 0 chr2 4217123 4217162 -249039421 + AT_rich Low_complexity Low_complexity 1 39 0 24 53 0 0 chr2 4217773 4217811 -249038772 + AT_rich Low_complexity Low_complexity 1 38 0 24 0 0 0 chr2 4218087 4218111 -249038472 + AT_rich Low_complexity Low_complexity 1 24 0 2327 118 8 30 chr2 4218777 4219149 -249037434 - THE1B LTR MaLR 0 364 1 11439 100 8 11 chr2 4219149 4220734 -249035849 - THE1B-int LTR MaLR 0 1580 1 2277 120 19 25 chr2 4220734 4221100 -249035483 - THE1B LTR MaLR 0 364 1 1436 221 24 3 chr2 4221691 4222021 -249034562 + MER2 DNA MER2_type 1 337 -8 557 301 92 15 chr2 4222132 4222338 -249034245 - MIR SINE MIR -27 235 14 307 375 97 21 chr2 4223125 4223413 -249033170 - L2 LINE L2 -1 3271 2962 2324 120 19 6 chr2 4223746 4224105 -249032478 - THE1B LTR MaLR 0 364 1 1497 190 47 0 chr2 4224789 4225063 -249031520 - AluJb SINE Alu -24 288 2 21 0 0 0 chr2 4225128 4225149 -249031434 + AT_rich Low_complexity Low_complexity 1 21 0 1718 172 6 21 chr2 4225481 4225813 -249030770 + MLT1A1 LTR MaLR 33 359 -6 243 61 0 0 chr2 4226920 4226953 -249029630 + (TG)n Simple_repeat Simple_repeat 2 34 0 353 250 11 11 chr2 4228065 4228157 -249028426 + L2 LINE L2 3221 3312 -1 12762 160 19 10 chr2 4229144 4231506 -249025077 + Tigger1 DNA MER2_type 26 2410 -8 254 26 53 0 chr2 4232840 4232878 -249023705 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 195 290 129 16 chr2 4234623 4234747 -249021836 + MIR SINE MIR 107 244 -18 383 169 0 0 chr2 4235751 4235828 -249020755 - L1PA15 LINE L1 -2 6163 6087 2906 155 21 6 chr2 4235830 4236352 -249020231 - L1PA15 LINE L1 -187 5978 5449 869 185 25 35 chr2 4237263 4237463 -249019120 + MER20 DNA MER1_type 1 198 -21 24 0 0 0 chr2 4237916 4237940 -249018643 + AT_rich Low_complexity Low_complexity 1 24 0 492 357 61 5 chr2 4238772 4238985 -249017598 + L2 LINE L2 2891 3115 -198 204 40 0 0 chr2 4238994 4239019 -249017564 + (TTTAA)n Simple_repeat Simple_repeat 3 27 0 1289 152 17 35 chr2 4239019 4239241 -249017342 - AluJo SINE Alu -29 283 64 395 266 105 0 chr2 4239499 4239642 -249016941 - MIR SINE MIR -13 249 92 306 0 0 0 chr2 4239957 4239991 -249016592 + (TG)n Simple_repeat Simple_repeat 1 34 0 216 333 19 0 chr2 4240030 4240084 -249016499 + MER5A DNA MER1_type 72 126 -63 2371 235 34 14 chr2 4241661 4242316 -249014267 + Charlie1a DNA MER1_type 1 668 -787 827 181 84 34 chr2 4242335 4242572 -249014011 + Charlie1a DNA MER1_type 856 1104 -351 1523 179 94 21 chr2 4243136 4243252 -249013331 + L1MA9 LINE L1 5717 5823 -489 1708 213 29 79 chr2 4243252 4243835 -249012748 - MLT2B3 LTR ERVL 0 554 1 1523 179 94 21 chr2 4243835 4244182 -249012401 + L1MA9 LINE L1 5823 6312 0 845 174 0 0 chr2 4244275 4244407 -249012176 - FRAM SINE Alu -24 152 21 1644 172 97 3 chr2 4247507 4247815 -249008768 - MER1B DNA MER1_type 0 337 1 198 294 0 0 chr2 4248448 4248499 -249008084 - L2 LINE L2 0 3313 3263 1991 153 3 10 chr2 4248595 4248909 -249007674 + AluSx SINE Alu 1 312 0 555 327 104 78 chr2 4248937 4250355 -249006228 - L2 LINE L2 -220 3093 1636 814 302 66 13 chr2 4250893 4251198 -249005385 + LTR16A LTR ERVL 120 440 -10 1073 256 55 23 chr2 4251199 4251598 -249004985 + MLT1C LTR MaLR 1 412 -55 321 384 12 16 chr2 4251787 4252042 -249004541 + ERVL LTR ERVL 4744 4997 -767 1817 186 0 0 chr2 4252399 4252695 -249003888 + AluSx SINE Alu 1 296 -16 1983 141 14 39 chr2 4253385 4253747 -249002836 - L1PA16 LINE L1 -9 6157 5805 277 169 3 0 chr2 4253752 4253816 -249002767 + L1PA16 LINE L1 5752 5801 -364 27 0 0 0 chr2 4254246 4254273 -249002310 + AT_rich Low_complexity Low_complexity 1 27 0 25 0 0 0 chr2 4254550 4254575 -249002008 + AT_rich Low_complexity Low_complexity 1 25 0 832 237 83 28 chr2 4254862 4255225 -249001358 - LTR52 LTR ERVL -37 384 2 1755 158 177 11 chr2 4255598 4255965 -249000618 - MSTA LTR MaLR 0 428 1 284 331 19 0 chr2 4256093 4256247 -249000336 + L1MEc LINE L1 101 257 -6139 1790 266 63 49 chr2 4257089 4258154 -248998429 + L1M4 LINE L1 4174 5253 -893 21 0 0 0 chr2 4259440 4259461 -248997122 + AT_rich Low_complexity Low_complexity 1 21 0 232 297 11 22 chr2 4259755 4259846 -248996737 + L1MEc LINE L1 112 201 -6195 297 323 39 32 chr2 4259905 4260184 -248996399 + L1ME2 LINE L1 5874 6154 -10 22 0 0 0 chr2 4260398 4260420 -248996163 + AT_rich Low_complexity Low_complexity 1 22 0 318 275 23 69 chr2 4260986 4261045 -248995538 - L1MB7 LINE L1 0 6184 6124 2893 151 40 31 chr2 4261045 4261567 -248995016 + MER1A DNA MER1_type 1 527 0 318 275 23 69 chr2 4261567 4261638 -248994945 - L1MB7 LINE L1 -60 6124 6060 1447 216 47 38 chr2 4261674 4262036 -248994547 - L1MB8 LINE L1 -99 6079 5711 1300 199 3 101 chr2 4262036 4262372 -248994211 + AluJo SINE Alu 1 303 -9 1447 216 47 38 chr2 4262372 4262454 -248994129 - L1MB8 LINE L1 -467 5711 5631 1714 254 65 15 chr2 4262454 4263114 -248993469 - L1M4 LINE L1 -3224 2922 2230 232 271 62 70 chr2 4263476 4263605 -248992978 + L2 LINE L2 3164 3291 -22 411 318 83 28 chr2 4263628 4264027 -248992556 + L1 LINE L1 4207 4627 -1519 21 57 0 0 chr2 4264055 4264090 -248992493 + AT_rich Low_complexity Low_complexity 1 35 0 440 235 20 0 chr2 4264288 4264386 -248992197 + MER46A DNA MER2_type 47 146 -90 * 990 199 57 64 chr2 4264384 4264680 -248991903 + MER2 DNA MER2_type 51 344 -1 209 184 0 0 chr2 4265587 4265625 -248990958 - MIR SINE MIR -168 94 57 201 270 63 3 chr2 4265628 4265710 -248990873 - MIR SINE MIR -64 144 81 536 276 0 17 chr2 4266038 4266219 -248990364 + (CA)n Simple_repeat Simple_repeat 1 178 0 273 364 33 54 chr2 4266515 4266699 -248989884 + L2 LINE L2 3075 3254 -18 303 335 80 17 chr2 4266741 4266917 -248989666 + MIR SINE MIR 49 235 -27 233 321 18 113 chr2 4269143 4269311 -248987272 + MIR SINE MIR 23 174 -88 22 0 0 0 chr2 4271986 4272008 -248984575 + AT_rich Low_complexity Low_complexity 1 22 0 450 109 75 9 chr2 4272353 4272700 -248983883 + (TA)n Simple_repeat Simple_repeat 1 370 0 27 73 0 0 chr2 4272779 4272834 -248983749 + AT_rich Low_complexity Low_complexity 1 55 0 192 77 0 0 chr2 4272837 4272863 -248983720 + (CATA)n Simple_repeat Simple_repeat 2 27 0 268 304 96 64 chr2 4274041 4274166 -248982417 + MIR3 SINE MIR 6 134 -74 278 294 22 44 chr2 4274168 4274304 -248982279 + MER94 DNA DNA 1 133 -1 242 194 16 0 chr2 4274740 4274802 -248981781 + GA-rich Low_complexity Low_complexity 4 66 0 279 324 72 9 chr2 4275007 4275118 -248981465 + L2 LINE L2 3195 3312 -1 1572 133 8 0 chr2 4275566 4275814 -248980769 + L1PA13 LINE L1 5905 6154 -9 420 301 20 14 chr2 4275877 4276023 -248980560 - MIR SINE MIR 0 262 116 200 114 68 0 chr2 4277976 4278020 -248978563 + T-rich Low_complexity Low_complexity 1 47 0 236 97 65 0 chr2 4278695 4278757 -248977826 + (TA)n Simple_repeat Simple_repeat 1 66 0 207 381 114 11 chr2 4281940 4282116 -248974467 - L2 LINE L2 -433 2881 2688 25 0 0 0 chr2 4282499 4282524 -248974059 + AT_rich Low_complexity Low_complexity 1 25 0 396 40 0 0 chr2 4282883 4282933 -248973650 + (CA)n Simple_repeat Simple_repeat 1 50 0 218 384 0 0 chr2 4283962 4284061 -248972522 + (CA)n Simple_repeat Simple_repeat 2 100 0 308 304 0 22 chr2 4284078 4284170 -248972413 + L1MC4 LINE L1 6614 6703 -1339 21 36 0 0 chr2 4284537 4284565 -248972018 + AT_rich Low_complexity Low_complexity 1 28 0 223 163 41 0 chr2 4285985 4286034 -248970549 + A-rich Low_complexity Low_complexity 3 53 0 483 302 148 0 chr2 4286048 4286250 -248970333 - MIR SINE MIR -27 235 4 404 296 99 28 chr2 4286420 4286633 -248969950 + MIR SINE MIR 32 259 -3 1759 214 84 15 chr2 4287355 4287809 -248968774 - MER66B LTR ERV1 -1 485 1 873 67 0 8 chr2 4287915 4288035 -248968548 + L1PB1 LINE L1 6030 6148 -3 1342 187 45 11 chr2 4289452 4289805 -248966778 + MER50 LTR ERV1 94 458 -276 3033 168 96 30 chr2 4289805 4290958 -248965625 + pTR5 LTR ERV1 35 455 -259 1041 177 112 0 chr2 4290958 4291190 -248965393 + MER50 LTR ERV1 453 710 -24 22 35 0 0 chr2 4291535 4291564 -248965019 + AT_rich Low_complexity Low_complexity 1 29 0 24 53 0 0 chr2 4292960 4292998 -248963585 + AT_rich Low_complexity Low_complexity 1 38 0 360 343 42 0 chr2 4293032 4293175 -248963408 + L1MC4 LINE L1 6768 6916 -1126 257 250 43 9 chr2 4293189 4293305 -248963278 + L1ME3A LINE L1 5993 6112 -58 369 0 0 0 chr2 4293323 4293364 -248963219 + (TG)n Simple_repeat Simple_repeat 2 42 0 349 238 131 52 chr2 4293421 4293673 -248962910 + L1MC4 LINE L1 6958 7229 -813 2238 92 0 14 chr2 4293844 4294139 -248962444 + AluY SINE Alu 1 291 -20 1200 215 63 26 chr2 4294942 4295291 -248961292 + MLT1A1 LTR MaLR 1 362 -3 187 200 0 80 chr2 4296223 4296273 -248960310 + L3 LINE CR1 1188 1233 -344 322 285 45 63 chr2 4297010 4297265 -248959318 - MIR SINE MIR -13 249 1 923 140 6 0 chr2 4297886 4298057 -248958526 + (TG)n Simple_repeat Simple_repeat 2 173 0 1561 189 28 7 chr2 4298340 4298626 -248957957 + AluSx SINE Alu 1 292 -20 194 274 105 32 chr2 4298976 4299071 -248957512 + MIR SINE MIR 116 217 -45 206 235 0 44 chr2 4299184 4299252 -248957331 + GA-rich Low_complexity Low_complexity 4 68 0 263 299 90 68 chr2 4299745 4299922 -248956661 + MIR SINE MIR 22 202 -60 1645 161 84 0 chr2 4300018 4300304 -248956279 + AluSx SINE Alu 1 310 -2 558 266 94 11 chr2 4300868 4301143 -248955440 + AluSx SINE Alu 5 302 0 1006 168 0 0 chr2 4301650 4301805 -248954778 - AluSg/x SINE Alu -3 309 155 590 240 188 41 chr2 4302432 4302848 -248953735 + L1MC4 LINE L1 7103 7579 -463 610 83 0 0 chr2 4302864 4302948 -248953635 + AluY SINE Alu 214 297 -14 22 94 0 0 chr2 4303148 4303212 -248953371 + AT_rich Low_complexity Low_complexity 1 64 0 23 33 0 0 chr2 4303328 4303358 -248953225 + AT_rich Low_complexity Low_complexity 1 30 0 31 44 0 0 chr2 4303609 4303654 -248952929 + AT_rich Low_complexity Low_complexity 1 45 0 1767 226 11 8 chr2 4303842 4304204 -248952379 - MLT1A1 LTR MaLR -2 363 1 195 286 67 84 chr2 4304446 4304565 -248952018 - L2 LINE L2 -1724 1590 1474 29 47 0 0 chr2 4304775 4304818 -248951765 + AT_rich Low_complexity Low_complexity 1 43 0 272 267 0 0 chr2 4304904 4304964 -248951619 + MSTC LTR MaLR 49 108 -320 310 254 25 90 chr2 4306213 4306335 -248950248 + MLT1J LTR MaLR 36 178 -301 1333 162 35 4 chr2 4306996 4307224 -248949359 + AluSg/x SINE Alu 73 307 -5 2334 85 7 0 chr2 4307302 4307596 -248948987 + AluSc SINE Alu 1 296 -13 1965 121 17 17 chr2 4308108 4308397 -248948186 + AluSx SINE Alu 1 289 -23 358 115 16 0 chr2 4308400 4308461 -248948122 - L1MB4 LINE L1 -28 6152 6091 2151 120 13 0 chr2 4308913 4309221 -248947362 - AluSp SINE Alu -1 312 1 3384 238 87 26 chr2 4309340 4309629 -248946954 + MER45B DNA AcHobo 1 271 -1310 2251 173 14 42 chr2 4309629 4310063 -248946520 - MSTB LTR MaLR -4 422 1 3384 238 87 26 chr2 4310063 4310754 -248945829 + MER45B DNA AcHobo 271 1040 0 845 261 28 21 chr2 4310951 4311242 -248945341 - L1PB3 LINE L1 -2986 3160 2868 5646 206 103 4 chr2 4311242 4312605 -248943978 + L1PB3 LINE L1 3186 4683 -1463 2009 173 55 107 chr2 4312595 4312806 -248943777 + L1PB3 LINE L1 5567 5788 -366 * 261 0 0 0 chr2 4312806 4312835 -248943748 + (TG)n Simple_repeat Simple_repeat 2 30 0 2009 173 55 107 chr2 4312835 4312907 -248943676 + L1PB3 LINE L1 5788 5862 -292 273 29 0 0 chr2 4312907 4312941 -248943642 + (TG)n Simple_repeat Simple_repeat 1 34 0 2009 173 55 107 chr2 4312941 4313262 -248943321 + L1PB3 LINE L1 5862 6140 -14 240 35 0 0 chr2 4314113 4314142 -248942441 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2155 86 0 0 chr2 4314144 4314423 -248942160 - AluY SINE Alu -32 279 1 195 368 35 49 chr2 4316857 4317001 -248939582 - MIR3 SINE MIR -52 156 15 21 0 0 0 chr2 4318094 4318115 -248938468 + AT_rich Low_complexity Low_complexity 1 21 0 236 244 41 32 chr2 4319259 4319382 -248937201 + (TG)n Simple_repeat Simple_repeat 1 124 0 2067 132 6 6 chr2 4319497 4319808 -248936775 + AluSx SINE Alu 1 311 -1 23 0 0 0 chr2 4319904 4319927 -248936656 + AT_rich Low_complexity Low_complexity 1 23 0 2090 180 78 24 chr2 4320911 4321323 -248935260 + Tigger2a DNA MER2_type 1 434 0 1456 196 43 51 chr2 4321534 4321927 -248934656 - MLT1B LTR MaLR 0 390 1 245 109 62 0 chr2 4321984 4322048 -248934535 + (TG)n Simple_repeat Simple_repeat 2 69 0 240 190 6 49 chr2 4322196 4322359 -248934224 + (TG)n Simple_repeat Simple_repeat 1 156 0 401 219 31 31 chr2 4322399 4322559 -248934024 + (TG)n Simple_repeat Simple_repeat 2 161 0 312 294 51 110 chr2 4322663 4322831 -248933752 + L2 LINE L2 2736 2886 -428 2240 116 0 22 chr2 4322831 4323150 -248933433 - AluSx SINE Alu 0 312 1 312 294 51 110 chr2 4323150 4323236 -248933347 + L2 LINE L2 2886 2975 -339 288 130 0 0 chr2 4323467 4323513 -248933070 + (TTTC)n Simple_repeat Simple_repeat 3 48 0 186 150 50 25 chr2 4323643 4323683 -248932900 + L2 LINE L2 2425 2465 -849 363 235 23 68 chr2 4323690 4323822 -248932761 + MER5B DNA MER1_type 23 148 -30 1882 130 7 0 chr2 4323870 4324146 -248932437 + MER61A LTR ERV1 65 342 -1 563 213 5 109 chr2 4325113 4325324 -248931259 - MER53 DNA DNA 0 189 1 1951 121 21 0 chr2 4326092 4326372 -248930211 + AluSx SINE Alu 1 286 -26 261 88 0 53 chr2 4329394 4329451 -248927132 + (TTTTC)n Simple_repeat Simple_repeat 3 56 0 3279 191 14 35 chr2 4329576 4329716 -248926867 + MER4D LTR ERV1 217 358 -545 2712 100 14 0 chr2 4329716 4330066 -248926517 + THE1A LTR MaLR 1 355 0 3279 191 14 35 chr2 4330066 4330617 -248925966 + MER4D LTR ERV1 358 894 -9 4364 114 116 130 chr2 4331197 4332622 -248923961 - pTR5 LTR ERV1 0 2438 743 2574 154 18 0 chr2 4333006 4333402 -248923181 + MER57A LTR ERV1 1 403 0 342 273 27 18 chr2 4333452 4333562 -248923021 + MIR3 SINE MIR 89 199 -9 309 264 213 7 chr2 4333773 4333953 -248922630 - MIR SINE MIR -6 256 38 204 254 0 34 chr2 4335492 4335551 -248921032 + GA-rich Low_complexity Low_complexity 2 58 0 259 272 43 11 chr2 4335835 4335927 -248920656 - L1ME LINE L1 -439 5682 5588 220 222 19 0 chr2 4336184 4336238 -248920345 + (CA)n Simple_repeat Simple_repeat 1 55 0 1978 173 80 0 chr2 4336263 4336575 -248920008 - MER1B DNA MER1_type 0 337 1 4303 307 116 28 chr2 4337428 4337638 -248918945 - L2 LINE L2 -615 2699 2509 185 0 40 0 chr2 4337638 4337663 -248918920 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4303 307 116 28 chr2 4337663 4339303 -248917280 - L2 LINE L2 -805 2509 632 2307 100 0 0 chr2 4339303 4339603 -248916980 + AluSc SINE Alu 1 300 -9 4303 307 116 28 chr2 4339603 4339896 -248916687 - L2 LINE L2 -2682 632 366 1429 237 52 43 chr2 4339940 4340003 -248916580 - MLT1C LTR MaLR -3 464 403 711 170 0 0 chr2 4340003 4340109 -248916474 + U6 snRNA snRNA 1 106 -1 1429 237 52 43 chr2 4340109 4340505 -248916078 - MLT1C LTR MaLR -64 403 1 2358 138 13 16 chr2 4340844 4341220 -248915363 - THE1C LTR MaLR 0 375 1 196 227 23 0 chr2 4341291 4341335 -248915248 - L2 LINE L2 -81 3191 3147 336 225 67 11 chr2 4341720 4341809 -248914774 - MLT1C LTR MaLR 0 467 374 3001 96 0 10 chr2 4343166 4343574 -248913009 + MLT2A1 LTR ERVL 1 404 -40 186 273 64 36 chr2 4343704 4343814 -248912769 + L2 LINE L2 2179 2291 -1023 244 337 23 12 chr2 4344354 4344440 -248912143 - MER5B DNA MER1_type -80 98 12 3409 114 7 0 chr2 4344486 4344935 -248911648 - MLT2A2 LTR ERVL -1 452 1 365 85 0 0 chr2 4345660 4345707 -248910876 - Alu SINE Alu -254 47 1 2551 118 0 3 chr2 4345965 4346320 -248910263 - THE1B LTR MaLR 0 364 11 262 308 34 51 chr2 4346822 4346939 -248909644 - MIR SINE MIR -100 162 48 449 386 55 48 chr2 4350299 4350698 -248905885 + L2 LINE L2 2870 3271 -1 837 183 109 45 chr2 4351029 4351231 -248905352 + MSTD LTR MaLR 1 215 -181 500 223 0 0 chr2 4351274 4351368 -248905215 + MSTD LTR MaLR 303 396 0 190 268 26 72 chr2 4352062 4352215 -248904368 + L2 LINE L2 2279 2424 -890 811 213 12 0 chr2 4353109 4353269 -248903314 + FRAM SINE Alu 1 159 -17 31 0 0 0 chr2 4353452 4353483 -248903100 + AT_rich Low_complexity Low_complexity 1 31 0 271 299 0 0 chr2 4353665 4353742 -248902841 + L1ME1 LINE L1 4522 4598 -1548 * 2744 261 31 27 chr2 4353738 4355093 -248901490 + L1ME1 LINE L1 4801 6162 -4 963 145 0 0 chr2 4355101 4355273 -248901310 + (TA)n Simple_repeat Simple_repeat 1 172 0 2049 151 53 34 chr2 4355297 4355654 -248900929 - THE1B LTR MaLR 0 364 1 2162 77 37 3 chr2 4555730 4556028 -248700555 + AluSx SINE Alu 1 308 -4 394 208 69 10 chr2 4556546 4556647 -248699936 - L1MC/D LINE L1 -2017 5768 5662 276 197 70 14 chr2 4556746 4556817 -248699766 + MER58C DNA MER1_type 127 201 -14 210 309 52 0 chr2 4557897 4557994 -248698589 + MIR SINE MIR 151 252 -10 243 267 0 69 chr2 4558195 4558311 -248698272 + G-rich Low_complexity Low_complexity 6 113 0 686 168 18 13 chr2 4559734 4559965 -248696618 + (CCCA)n Simple_repeat Simple_repeat 1 232 0 484 243 12 0 chr2 4559983 4560152 -248696431 + (TCCA)n Simple_repeat Simple_repeat 1 171 0 * 582 188 28 11 chr2 4560125 4560301 -248696282 + (CCCA)n Simple_repeat Simple_repeat 2 180 0 192 301 55 0 chr2 4565022 4565095 -248691488 - L2 LINE L2 -220 3052 2976 476 265 49 54 chr2 4567062 4567266 -248689317 - MIR SINE MIR -40 222 20 270 302 129 14 chr2 4572498 4572637 -248683946 - MIR SINE MIR -1 261 107 1315 213 33 26 chr2 4572798 4573103 -248683480 - MER44D DNA MER2_type -30 579 3 450 0 0 0 chr2 4573113 4573163 -248683420 + (TG)n Simple_repeat Simple_repeat 2 51 0 406 298 78 5 chr2 4573545 4573736 -248682847 + MIR SINE MIR 36 240 -22 205 216 83 49 chr2 4574007 4574121 -248682462 + MIR SINE MIR 11 139 -69 2205 104 0 0 chr2 4575502 4575800 -248680783 + AluSg SINE Alu 6 303 -7 357 323 110 16 chr2 4576240 4576526 -248680057 - L1ME LINE L1 -285 5836 5520 375 295 65 35 chr2 4576877 4577077 -248679506 - L2 LINE L2 -4 3309 3104 233 371 32 27 chr2 4577373 4577559 -248679024 - L2 LINE L2 -629 2685 2499 1737 141 0 14 chr2 4578128 4578405 -248678178 + AluSx SINE Alu 1 273 -39 1673 151 3 49 chr2 4580372 4580676 -248675907 + AluJo SINE Alu 1 290 -22 6698 196 160 9 chr2 4580724 4582356 -248674227 + L1PBa LINE L1 7 1884 -4979 3685 133 22 8 chr2 4582358 4583387 -248673196 + L1P5 LINE L1 4751 5794 -357 441 0 0 0 chr2 4583387 4583436 -248673147 + (TA)n Simple_repeat Simple_repeat 2 50 0 3685 133 22 8 chr2 4583436 4583463 -248673120 + L1P5 LINE L1 5794 5819 -332 2131 114 0 16 chr2 4585071 4585387 -248671196 + AluSx SINE Alu 1 311 -1 21 0 0 0 chr2 4585387 4585408 -248671175 + AT_rich Low_complexity Low_complexity 1 21 0 1694 229 8 30 chr2 4586162 4586534 -248670049 + MLT1A1 LTR MaLR 1 364 -1 21 36 0 0 chr2 4586812 4586840 -248669743 + AT_rich Low_complexity Low_complexity 1 28 0 296 48 24 0 chr2 4586869 4586911 -248669672 + (TTTTA)n Simple_repeat Simple_repeat 1 43 0 231 114 0 0 chr2 4586912 4586947 -248669636 + (CGTTG)n Simple_repeat Simple_repeat 1 35 0 1928 150 0 0 chr2 4586949 4587236 -248669347 - AluSx SINE Alu -25 287 1 1433 176 3 102 chr2 4587501 4587825 -248668758 + AluJb SINE Alu 1 292 -20 393 136 0 0 chr2 4588461 4588527 -248668056 + (GGGA)n Simple_repeat Simple_repeat 1 66 0 210 240 0 20 chr2 4590782 4590832 -248665751 + CT-rich Low_complexity Low_complexity 6 54 0 2145 96 10 0 chr2 4591850 4592152 -248664431 - AluSp SINE Alu -8 305 1 1830 143 24 0 chr2 4592880 4593167 -248663416 - AluSx SINE Alu -16 296 3 1224 266 65 54 chr2 4593194 4593731 -248662852 - L1ME1 LINE L1 -35 6131 5589 23 0 0 0 chr2 4594172 4594195 -248662388 + AT_rich Low_complexity Low_complexity 1 23 0 293 285 81 16 chr2 4595362 4595485 -248661098 - MIR SINE MIR -107 155 25 1837 130 74 0 chr2 4595540 4595824 -248660759 + AluSx SINE Alu 1 305 -7 207 0 0 0 chr2 4597926 4597949 -248658634 + (A)n Simple_repeat Simple_repeat 1 23 0 282 344 33 0 chr2 4598161 4598283 -248658300 - L2 LINE L2 -5 3308 3183 390 338 24 29 chr2 4599831 4600038 -248656545 + MIR SINE MIR 51 256 -6 1443 103 15 15 chr2 4604038 4604241 -248652342 + AluSq SINE Alu 2 204 -109 242 311 25 43 chr2 4605029 4605190 -248651393 - MIR3 SINE MIR -3 205 48 1657 156 33 0 chr2 4607597 4607841 -248648742 + AluJb SINE Alu 13 264 -48 667 224 44 6 chr2 4610339 4610522 -248646061 - L1MC4a LINE L1 -1951 5857 5668 333 195 37 49 chr2 4611362 4611444 -248645139 - L1MC4 LINE L1 -1326 6716 6636 218 269 0 0 chr2 4611752 4611804 -248644779 + GA-rich Low_complexity Low_complexity 1 52 0 553 271 109 35 chr2 4612281 4612621 -248643962 - MLT1J1 LTR MaLR -2 444 80 528 325 92 14 chr2 4613819 4614332 -248642251 - HAL1 LINE L1 -988 1519 967 2380 71 0 20 chr2 4615717 4616044 -248640539 + AluY SINE Alu 1 321 0 196 244 233 11 chr2 4616067 4616157 -248640426 - MIR SINE MIR -133 129 20 396 233 0 69 chr2 4616204 4616393 -248640190 + (CACAC)n Simple_repeat Simple_repeat 2 177 0 391 257 5 59 chr2 4616431 4616618 -248639965 + (CACAC)n Simple_repeat Simple_repeat 2 178 0 191 150 25 25 chr2 4617321 4617361 -248639222 - L2 LINE L2 -6 3307 3268 1036 252 66 7 chr2 4617373 4617647 -248638936 + L1MD2 LINE L1 6060 6349 -10 567 265 117 47 chr2 4618607 4618966 -248637617 - MLT1J2 LTR MaLR 0 450 67 757 160 56 0 chr2 4619109 4619234 -248637349 + AluJb SINE Alu 2 133 -179 1870 164 16 3 chr2 4619250 4619554 -248637029 + AluJb SINE Alu 1 308 -4 282 315 40 20 chr2 4619724 4619873 -248636710 + L1ME4a LINE L1 333 484 -5912 1648 198 60 11 chr2 4620490 4620843 -248635740 - MLT1A2 LTR MaLR -4 370 1 862 270 35 76 chr2 4620850 4620950 -248635633 + L1ME4a LINE L1 793 896 -5513 1038 212 38 19 chr2 4620950 4621162 -248635421 - MER20 DNA MER1_type -3 216 1 862 270 35 76 chr2 4621162 4621665 -248634918 + L1ME4a LINE L1 896 1371 -5038 2313 256 44 13 chr2 4621668 4622433 -248634150 + L1ME4a LINE L1 3760 4548 -1858 1409 221 143 20 chr2 4622435 4622923 -248633660 + L1ME4a LINE L1 5029 5576 -830 829 191 114 0 chr2 4622921 4623141 -248633442 - L1PA16 LINE L1 -1 6165 5921 * 213 154 0 0 chr2 4623938 4623977 -248632606 + (TG)n Simple_repeat Simple_repeat 1 39 0 701 289 39 10 chr2 4625295 4625499 -248631084 + MER58A DNA MER1_type 15 224 0 471 256 93 69 chr2 4625940 4626361 -248630222 + L1ME4a LINE L1 5877 6307 -74 8643 186 39 14 chr2 4626839 4628809 -248627774 + L1MA9 LINE L1 2897 4915 -1231 7292 126 18 129 chr2 4628812 4630414 -248626169 + Tigger4(Zombi) DNA MER2_type 4 1427 -1304 2169 137 35 30 chr2 4630414 4630787 -248625796 - THE1C LTR MaLR 0 375 1 9426 114 59 45 chr2 4630787 4632345 -248624238 - THE1B-int LTR MaLR 0 1580 1 2402 119 34 8 chr2 4632346 4632700 -248623883 - THE1B LTR MaLR -1 363 1 5078 159 36 22 chr2 4632702 4633849 -248622734 + L1MA9 LINE L1 5071 6200 -112 1770 190 0 0 chr2 4633849 4634128 -248622455 + AluJo SINE Alu 1 279 -33 375 23 0 0 chr2 4634128 4634172 -248622411 + (CA)n Simple_repeat Simple_repeat 1 44 0 5078 159 36 22 chr2 4634172 4634236 -248622347 + L1MA9 LINE L1 6199 6307 -5 895 243 38 0 chr2 4639306 4639516 -248617067 - MER20 DNA MER1_type 0 219 2 1007 214 43 12 chr2 4641401 4641658 -248614925 + MLT1B LTR MaLR 1 265 -125 889 179 11 11 chr2 4641701 4641880 -248614703 + MLT1B LTR MaLR 23 201 -189 485 268 94 24 chr2 4643153 4643407 -248613176 + HAL1 LINE L1 578 849 -1658 664 287 142 12 chr2 4643644 4643982 -248612601 + HAL1 LINE L1 1162 1543 -964 476 284 130 41 chr2 4643997 4644257 -248612326 + HAL1 LINE L1 1584 1874 -633 7136 92 34 9 chr2 4644257 4645202 -248611381 - LTR5 LTR ERVK -1 968 1 476 284 130 41 chr2 4645202 4645233 -248611350 + HAL1 LINE L1 1874 1901 -606 1262 220 116 25 chr2 4645400 4645796 -248610787 - MLT1C LTR MaLR 0 467 36 289 279 0 0 chr2 4646101 4646187 -248610396 + LTR67 LTR ERVL 468 553 -4 361 82 0 0 chr2 4646337 4646386 -248610197 - MADE1 DNA Mariner 0 80 32 490 284 28 11 chr2 4649831 4650007 -248606576 + (TG)n Simple_repeat Simple_repeat 1 179 0 407 220 28 34 chr2 4650045 4650378 -248606205 + (TATG)n Simple_repeat Simple_repeat 1 331 0 337 246 23 14 chr2 4650385 4650746 -248605837 + (TG)n Simple_repeat Simple_repeat 1 364 0 216 149 0 0 chr2 4651416 4651463 -248605120 + (A)n Simple_repeat Simple_repeat 1 47 0 2238 125 0 3 chr2 4651465 4651777 -248604806 + AluSx SINE Alu 1 311 -1 214 235 86 37 chr2 4651961 4652042 -248604541 - MIR SINE MIR -58 150 66 886 294 95 33 chr2 4652331 4653049 -248603534 + HAL1 LINE L1 597 1358 -1149 421 267 59 72 chr2 4653145 4653366 -248603217 + MIR SINE MIR 45 262 0 470 274 150 16 chr2 4653372 4653678 -248602905 + HAL1 LINE L1 1441 1787 -720 773 244 101 0 chr2 4653978 4654195 -248602388 + MIR SINE MIR 14 252 -10 720 225 62 72 chr2 4654544 4654937 -248601646 + LTR42 LTR ERVL 4 478 -17 2677 87 6 0 chr2 4654970 4655327 -248601256 - THE1B LTR MaLR -5 359 1 186 356 37 37 chr2 4655792 4655927 -248600656 + L2 LINE L2 3138 3272 0 209 189 0 0 chr2 4655929 4655966 -248600617 + (TGAG)n Simple_repeat Simple_repeat 1 37 0 263 266 156 18 chr2 4656041 4656150 -248600433 - L2 LINE L2 -1 3271 3148 565 348 74 40 chr2 4657914 4658291 -248598292 + HAL1 LINE L1 1039 1428 -1079 2303 123 0 0 chr2 4658294 4658603 -248597980 - AluSx SINE Alu -3 309 1 405 293 151 52 chr2 4658613 4658978 -248597605 + L1MC4a LINE L1 5766 6166 -1642 429 283 123 42 chr2 4658997 4659209 -248597374 - MLT1I LTR MaLR -66 343 115 1100 244 139 11 chr2 4659543 4660308 -248596275 + L1M4 LINE L1 1643 2527 -3855 871 243 17 0 chr2 4660317 4660498 -248596085 + MER8 DNA MER2_type 1 184 -55 2004 209 51 6 chr2 4660498 4660971 -248595612 + L1M4 LINE L1 4939 5432 -950 706 190 8 0 chr2 4660971 4661092 -248595491 + FLAM_C SINE Alu 9 130 -13 1716 197 0 10 chr2 4661096 4661390 -248595193 + AluJo SINE Alu 3 293 -19 1671 166 40 3 chr2 4661393 4661790 -248594793 + L1M4 LINE L1 5456 5865 -555 229 328 46 15 chr2 4661800 4661931 -248594652 + HAL1b LINE L1 387 521 -827 265 301 52 22 chr2 4662469 4662605 -248593978 + L1M4c LINE L1 3831 3970 -2412 1173 325 130 44 chr2 4662614 4662894 -248593689 + L1M4c LINE L1 4109 4364 -2018 282 29 0 0 chr2 4662894 4662929 -248593654 + (CA)n Simple_repeat Simple_repeat 2 36 0 1173 325 130 44 chr2 4662929 4663543 -248593040 + L1M4c LINE L1 4364 5080 -1302 1086 248 105 16 chr2 4663560 4663874 -248592709 + MER2 DNA MER2_type 1 342 -2 744 315 22 8 chr2 4663906 4664139 -248592444 + MIR SINE MIR 11 241 -21 222 307 0 50 chr2 4664825 4664926 -248591657 + (CACG)n Simple_repeat Simple_repeat 3 98 0 4151 154 37 47 chr2 4668382 4669376 -248587207 - MER11C LTR ERVK 0 1071 1 2463 39 3 3 chr2 4671801 4672084 -248584499 - AluY SINE Alu -28 283 1 467 312 40 6 chr2 4672896 4673069 -248583514 - MIR SINE MIR -26 236 58 334 274 150 65 chr2 4673581 4673921 -248582662 + MLT1E LTR MaLR 285 592 -1 273 270 108 9 chr2 4674006 4674117 -248582466 - MIR SINE MIR -59 149 28 654 228 206 9 chr2 4675241 4675460 -248581123 + MLT1L LTR MaLR 349 610 -5 497 298 44 39 chr2 4675562 4675767 -248580816 + MIR SINE MIR 47 252 -10 186 143 0 0 chr2 4676615 4676650 -248579933 + (CCCA)n Simple_repeat Simple_repeat 4 38 0 372 274 177 26 chr2 4677435 4677745 -248578838 + MARNA DNA Mariner 26 382 -204 837 274 95 3 chr2 4678527 4678906 -248577677 + L1MDa LINE L1 16 429 -6111 2243 201 52 17 chr2 4679141 4679659 -248576924 + L1MC1 LINE L1 5786 6321 -12 272 245 13 8 chr2 4679819 4679915 -248576668 - MLT1J2 LTR MaLR -309 141 70 323 158 11 116 chr2 4680038 4680104 -248576479 - L1PA15 LINE L1 -172 5993 5938 2336 86 3 29 chr2 4680104 4680418 -248576165 - AluSx SINE Alu -6 306 1 323 158 11 116 chr2 4680418 4680446 -248576137 - L1PA15 LINE L1 -227 5938 5909 948 153 25 0 chr2 4680454 4680617 -248575966 + L1PA15 LINE L1 5995 6161 -4 23 0 0 0 chr2 4680618 4680641 -248575942 + AT_rich Low_complexity Low_complexity 1 23 0 23 68 0 0 chr2 4682810 4682854 -248573729 + AT_rich Low_complexity Low_complexity 1 44 0 2015 66 4 0 chr2 4683330 4683587 -248572996 - L1PA5 LINE L1 0 6154 5897 320 124 8 63 chr2 4683903 4683975 -248572608 + MLT1A2 LTR MaLR 1 67 -307 1578 222 18 0 chr2 4683978 4684311 -248572272 - MER47A DNA MER2_type 0 366 28 1210 198 62 21 chr2 4684328 4684616 -248571967 + MLT1A2 LTR MaLR 75 374 0 1637 126 20 0 chr2 4689347 4689594 -248566989 + MER1B DNA MER1_type 1 252 -87 293 259 77 21 chr2 4689710 4689853 -248566730 + ERVL LTR ERVL 2543 2693 -3071 569 210 109 0 chr2 4689893 4690031 -248566552 + MER58C DNA MER1_type 61 213 -2 365 314 26 0 chr2 4691076 4691232 -248565351 + ERVL LTR ERVL 3153 3312 -2342 358 154 15 70 chr2 4691364 4691712 -248564871 + (CTCA)n Simple_repeat Simple_repeat 1 328 0 431 329 7 0 chr2 4691976 4692131 -248564452 + ERVL LTR ERVL 3777 3932 -1832 255 145 197 40 chr2 4692406 4692449 -248564134 + LTR33A LTR ERVL 434 469 -54 15088 127 22 17 chr2 4692449 4694855 -248561728 - Tigger1 DNA MER2_type 0 2418 1 255 145 197 40 chr2 4694855 4694887 -248561696 + LTR33A LTR ERVL 469 521 -2 199 377 8 16 chr2 4694939 4695061 -248561522 - L2 LINE L2 -950 2364 2244 710 327 111 44 chr2 4695172 4696118 -248560465 + L1MEd LINE L1 79 1087 -5032 548 296 145 88 chr2 4696171 4697065 -248559518 + L1MEd LINE L1 1234 2178 -4132 564 89 0 0 chr2 4697218 4697297 -248559286 + (GGGA)n Simple_repeat Simple_repeat 3 81 0 2370 156 19 28 chr2 4698155 4698352 -248558231 + MSTB LTR MaLR 2 199 -227 1881 124 6 70 chr2 4698352 4698496 -248558087 + AluSx SINE Alu 3 155 -157 2290 108 0 0 chr2 4698496 4698801 -248557782 + AluSx SINE Alu 1 305 -7 1881 124 6 70 chr2 4698801 4698986 -248557597 + AluSx SINE Alu 155 311 -1 2370 156 19 28 chr2 4698986 4699217 -248557366 + MSTB LTR MaLR 199 426 0 7793 184 61 9 chr2 4699219 4700787 -248555796 + MSTB-int LTR MaLR 3 1651 0 2023 162 70 15 chr2 4700787 4701189 -248555394 + MSTB LTR MaLR 1 424 -2 209 289 64 80 chr2 4701622 4701809 -248554774 - MIR3 SINE MIR -17 191 8 259 320 150 10 chr2 4702093 4702293 -248554290 + MIR SINE MIR 32 259 -3 2298 124 0 0 chr2 4702493 4702799 -248553784 + AluSx SINE Alu 1 306 -6 2531 131 48 15 chr2 4703065 4703638 -248552945 + MER4E LTR ERV1 1 756 -10 2475 209 48 52 chr2 4704514 4705226 -248551357 + L1MD2 LINE L1 5650 6358 -1 2303 107 13 0 chr2 4705362 4705662 -248550921 - AluSx SINE Alu -4 308 5 237 351 0 11 chr2 4705980 4706074 -248550509 + (CA)n Simple_repeat Simple_repeat 2 94 0 247 316 94 0 chr2 4706581 4706698 -248549885 + L2 LINE L2 3140 3267 -5 243 0 0 0 chr2 4709102 4709129 -248547454 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 803 257 72 61 chr2 4709813 4710307 -248546276 + L1ME LINE L1 28 5189 -957 2284 105 0 0 chr2 4710394 4710680 -248545903 + AluSg SINE Alu 1 286 -24 393 75 0 0 chr2 4710683 4710736 -248545847 + (GGGA)n Simple_repeat Simple_repeat 4 56 0 1202 234 49 28 chr2 4710753 4711196 -248545387 + L1ME LINE L1 5188 5638 -528 718 341 63 14 chr2 4711563 4712058 -248544525 + HERV16 LTR ERVL 1765 2283 -3481 716 347 63 6 chr2 4712131 4712494 -248544089 + HERV16 LTR ERVL 2357 2740 -2256 349 309 18 18 chr2 4712621 4712731 -248543852 + HERV16 LTR ERVL 2953 3062 -1934 428 336 77 6 chr2 4712792 4713155 -248543428 + HERV16 LTR ERVL 3143 3531 -1954 2153 164 59 82 chr2 4714036 4714596 -248541987 - L1MA8 LINE L1 -17 6274 5728 2214 62 29 0 chr2 4714868 4715168 -248541415 - AluSg SINE Alu 0 308 1 487 249 40 57 chr2 4715912 4716089 -248540494 - MIR3 SINE MIR -1 207 34 253 274 38 28 chr2 4717293 4717399 -248539184 + HERV16 LTR ERVL 2046 2152 -2844 313 163 35 47 chr2 4719299 4719385 -248537198 + MIR SINE MIR 60 144 -118 786 61 0 0 chr2 4721161 4721260 -248535323 - THE1A LTR MaLR -256 99 1 855 226 79 39 chr2 4721401 4721680 -248534903 - L1MB2 LINE L1 -53 6118 5829 926 170 0 0 chr2 4721760 4721901 -248534682 + AluJb SINE Alu 1 141 -171 2313 108 0 0 chr2 4721906 4722202 -248534381 + AluY SINE Alu 1 296 -15 2228 49 0 0 chr2 4722233 4722520 -248534063 + L1PA8 LINE L1 5885 6171 -1 1195 149 0 0 chr2 4722598 4722772 -248533811 + AluJb SINE Alu 129 302 -10 230 290 86 11 chr2 4722784 4722877 -248533706 - MLT1D LTR MaLR 0 505 406 * 889 251 146 25 chr2 4722872 4723278 -248533305 - MLT1E2 LTR MaLR -154 470 9 364 334 58 8 chr2 4723307 4723597 -248532986 - L2 LINE L2 -220 3052 2687 2940 197 20 6 chr2 4725846 4726497 -248530086 + L1MB3 LINE L1 5520 6179 -4 251 228 0 0 chr2 4726957 4727014 -248529569 + L1MB7 LINE L1 5350 5406 -764 233 186 0 0 chr2 4727049 4727092 -248529491 + L1MB7 LINE L1 5364 5406 -764 225 209 0 0 chr2 4727131 4727174 -248529409 + L1MB7 LINE L1 5364 5406 -764 1133 195 8 7 chr2 4727214 4727468 -248529115 + L1MB7 LINE L1 5363 5585 -599 2299 116 0 26 chr2 4727483 4727537 -248529046 - L1PB1 LINE L1 -2 6149 6095 2323 114 0 0 chr2 4727537 4727843 -248528740 - AluSx SINE Alu -6 306 1 2299 116 0 26 chr2 4727843 4728166 -248528417 - L1PB1 LINE L1 -56 6095 5782 419 234 43 21 chr2 4728166 4728251 -248528332 + L1MC4 LINE L1 6614 6703 -1339 1270 73 0 6 chr2 4728251 4728428 -248528155 - L1PB1 LINE L1 -359 5792 5617 * 1798 251 38 36 chr2 4728423 4728827 -248527756 + L1MB7 LINE L1 5591 5998 -186 1704 122 35 52 chr2 4728827 4729113 -248527470 + AluJb SINE Alu 6 286 -26 1798 251 38 36 chr2 4729113 4729289 -248527294 + L1MB7 LINE L1 5998 6172 -12 2246 93 0 0 chr2 4729326 4729605 -248526978 - AluSc SINE Alu -30 279 1 506 237 0 0 chr2 4730356 4730610 -248525973 + (CA)n Simple_repeat Simple_repeat 1 254 0 195 250 0 0 chr2 4730634 4730734 -248525849 + (CA)n Simple_repeat Simple_repeat 1 100 0 336 222 3 45 chr2 4730782 4731163 -248525420 + (CA)n Simple_repeat Simple_repeat 1 364 0 200 275 17 6 chr2 4731218 4731396 -248525187 + (CA)n Simple_repeat Simple_repeat 1 180 0 305 290 196 0 chr2 4732123 4732261 -248524322 - MIR SINE MIR -20 242 78 288 295 95 0 chr2 4734601 4734706 -248521877 + L2 LINE L2 3108 3222 -50 280 252 0 15 chr2 4736365 4736496 -248520087 + (CA)n Simple_repeat Simple_repeat 1 129 0 566 268 82 55 chr2 4737023 4737243 -248519340 + MIR SINE MIR 20 245 -17 353 336 34 0 chr2 4738723 4738872 -248517711 + MIR SINE MIR 58 211 -51 412 280 177 0 chr2 4739128 4739303 -248517280 + MIR SINE MIR 57 262 0 8801 101 4 4 chr2 4940978 4942261 -248314322 - L1P LINE L1 -1759 4387 3105 205 196 11 11 chr2 4942363 4942455 -248314128 + (CATTC)n Satellite Satellite 3 94 0 731 175 0 29 chr2 4942466 4942986 -248313597 + (CATTC)n Satellite Satellite 1 505 0 709 177 2 2 chr2 4943040 4943546 -248313037 + (CATTC)n Satellite Satellite 1 506 0 389 178 8 0 chr2 4943559 4943677 -248312906 + (CATTC)n Satellite Satellite 3 121 0 181 266 166 71 chr2 4944325 4944633 -248311950 - L3 LINE CR1 -246 1331 995 366 42 0 0 chr2 4944723 4944771 -248311812 + (CA)n Simple_repeat Simple_repeat 1 48 0 24 53 0 0 chr2 4944808 4944846 -248311737 + AT_rich Low_complexity Low_complexity 1 38 0 422 264 4 16 chr2 4944870 4945113 -248311470 - L1MA9 LINE L1 -38 6274 5989 228 67 0 0 chr2 4945260 4945290 -248311293 + (TA)n Simple_repeat Simple_repeat 2 31 0 2242 108 0 0 chr2 4945973 4946270 -248310313 + AluSg SINE Alu 6 302 -8 27 29 0 0 chr2 4946270 4946304 -248310279 + AT_rich Low_complexity Low_complexity 1 34 0 290 247 47 12 chr2 4946571 4946656 -248309927 + MIR SINE MIR 104 191 -71 415 217 12 12 chr2 4946667 4946750 -248309833 + MER30 DNA MER1_type 148 230 0 265 312 35 29 chr2 4946767 4946940 -248309643 + L1MEc LINE L1 1908 2081 -4315 763 216 161 6 chr2 4947100 4947421 -248309162 - Tigger6 DNA MER2_type 0 1597 1148 11792 153 32 5 chr2 4947465 4947798 -248308785 + Tigger1 DNA MER2_type 1 324 -2094 2183 125 143 8 chr2 4947798 4948175 -248308408 + MSTA LTR MaLR 1 428 0 11792 153 32 5 chr2 4948175 4949821 -248306762 + Tigger1 DNA MER2_type 324 2033 -385 3554 194 28 14 chr2 4949922 4951145 -248305438 - L1MA9 LINE L1 -432 5880 4636 1651 174 57 3 chr2 4951145 4951427 -248305156 + AluSp SINE Alu 1 297 -16 3554 194 28 14 chr2 4951427 4951555 -248305028 - L1MA9 LINE L1 -1676 4636 4511 293 0 27 0 chr2 4951557 4951594 -248304989 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 4582 17 0 0 chr2 4951594 4952116 -248304467 - L1PA2 LINE L1 -13 6142 5621 3081 15 0 0 chr2 4952116 4952503 -248304080 + L1PA2 LINE L1 5227 5613 -542 1227 183 28 37 chr2 4952499 4952694 -248303889 - L1MA9 LINE L1 -1624 4522 4330 * 2159 122 0 0 chr2 4952694 4952989 -248303594 + AluSx SINE Alu 11 305 -7 1227 183 28 37 chr2 4952989 4953115 -248303468 - L1MA9 LINE L1 -1816 4330 4204 368 241 127 16 chr2 4953323 4953568 -248303015 - L1M4 LINE L1 -3070 3076 2805 308 347 141 38 chr2 4954080 4954449 -248302134 - L2 LINE L2 -4 3268 2862 1711 164 66 101 chr2 4954659 4955085 -248301498 - MSTB LTR MaLR -15 411 1 359 352 73 24 chr2 4955671 4955918 -248300665 - L2 LINE L2 -468 2846 2588 1106 264 151 37 chr2 4955932 4956352 -248300231 + MLT2B1 LTR ERVL 3 482 -38 955 89 13 0 chr2 4956352 4956509 -248300074 + (TCTA)n Simple_repeat Simple_repeat 4 162 0 1106 264 151 37 chr2 4956509 4956553 -248300030 + MLT2B1 LTR ERVL 482 520 0 3531 176 42 90 chr2 4956906 4958177 -248298406 + L1PB3 LINE L1 4942 6154 0 2185 92 0 7 chr2 4959126 4959420 -248297163 + AluSc SINE Alu 1 292 -17 249 378 44 7 chr2 4960035 4960170 -248296413 + MIR SINE MIR 46 185 -77 206 62 31 0 chr2 4960366 4960398 -248296185 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 243 136 45 0 chr2 4960399 4960443 -248296140 - MER5B DNA MER1_type -132 46 1 327 280 64 45 chr2 4960471 4960628 -248295955 - MER105 DNA DNA -1 203 44 457 282 48 62 chr2 4960692 4960901 -248295682 + MER63A DNA MER1_type 2 207 -3 200 322 67 22 chr2 4961474 4961564 -248295019 + L3 LINE CR1 1169 1262 -315 432 294 32 24 chr2 4961666 4961792 -248294791 + L3 LINE CR1 1450 1576 -1 607 116 45 18 chr2 4962161 4962273 -248294310 + L1PB2 LINE L1 5677 5791 -360 254 160 13 53 chr2 4962385 4962460 -248294123 + (TA)n Simple_repeat Simple_repeat 1 72 0 2175 97 54 26 chr2 4962461 4962810 -248293773 + L1PB2 LINE L1 5789 6147 -4 1698 130 85 4 chr2 4963439 4963709 -248292874 - AluSx SINE Alu -12 300 9 315 273 0 0 chr2 4964166 4964243 -248292340 - L1MC4 LINE L1 -1350 6692 6616 27 29 0 0 chr2 4964276 4964310 -248292273 + AT_rich Low_complexity Low_complexity 1 34 0 184 344 16 88 chr2 4964373 4964498 -248292085 - MIR SINE MIR -59 149 34 24 32 0 0 chr2 4965141 4965172 -248291411 + AT_rich Low_complexity Low_complexity 1 31 0 207 315 82 86 chr2 4966441 4966708 -248289875 + L2 LINE L2 2228 2493 -821 229 316 158 8 chr2 4966774 4966907 -248289676 - MIR SINE MIR 0 262 110 234 354 85 0 chr2 4967099 4967181 -248289402 - L2 LINE L2 -12 3260 3172 27 0 0 0 chr2 4968740 4968767 -248287816 + AT_rich Low_complexity Low_complexity 1 27 0 6776 70 13 1 chr2 4969740 4971311 -248285272 - L1PA7 LINE L1 -4 6150 4564 16969 29 0 0 chr2 4971411 4974195 -248282388 + L1PA2 LINE L1 3372 6155 0 29 47 0 0 chr2 4974576 4974619 -248281964 + AT_rich Low_complexity Low_complexity 1 43 0 190 308 199 13 chr2 4975084 4975240 -248281343 + MIR SINE MIR 37 221 -41 220 363 12 0 chr2 4975476 4975556 -248281027 - L2 LINE L2 -212 3060 2980 1533 200 64 6 chr2 4977053 4977398 -248279185 + MLT2D LTR ERVL 1 365 -49 280 228 51 13 chr2 4978366 4978445 -248278138 + MIR SINE MIR 110 191 -71 944 270 58 70 chr2 4978961 4979461 -248277122 + MLT1L LTR MaLR 79 572 -43 792 253 13 17 chr2 4979946 4980179 -248276404 - MER72 LTR ERV1 -243 479 248 206 313 50 38 chr2 4981813 4981893 -248274690 - L2 LINE L2 -5 3267 3187 289 258 0 0 chr2 4982324 4982417 -248274166 - Charlie7 DNA MER1_type -1937 675 583 435 218 122 20 chr2 4982482 4982629 -248273954 - Charlie7 DNA MER1_type -2130 482 321 23 78 0 0 chr2 4982766 4982817 -248273766 + AT_rich Low_complexity Low_complexity 1 51 0 357 314 47 23 chr2 4983591 4983763 -248272820 + MIR SINE MIR 28 203 -59 875 254 6 0 chr2 4984510 4984691 -248271892 + MER5A DNA MER1_type 8 189 0 224 254 51 0 chr2 4985159 4985218 -248271365 - MIR SINE MIR -55 153 92 34 65 0 0 chr2 4985572 4985634 -248270949 + AT_rich Low_complexity Low_complexity 1 62 0 214 278 11 78 chr2 4985688 4985778 -248270805 + L2 LINE L2 3189 3272 0 1492 204 6 19 chr2 4987094 4987407 -248269176 - AluJb SINE Alu -1 311 3 255 247 78 26 chr2 4987447 4987524 -248269059 - MIR SINE MIR -179 83 3 255 321 46 30 chr2 4987646 4987777 -248268806 + MIR SINE MIR 99 231 -31 279 315 94 26 chr2 4990277 4990544 -248266039 - L1MEc LINE L1 -4579 1817 1533 675 212 0 0 chr2 4990565 4990683 -248265900 + FLAM_C SINE Alu 1 118 -15 319 270 86 40 chr2 4990828 4991002 -248265581 - L1M4 LINE L1 -2281 3865 3684 337 320 99 41 chr2 4991088 4991453 -248265130 - L1M4 LINE L1 -2642 3504 3119 289 289 41 38 chr2 4991966 4992232 -248264351 - L1M4 LINE L1 -3523 2623 2357 457 341 102 23 chr2 4994270 4994751 -248261832 - L1ME4a LINE L1 -24 6097 5579 1109 254 0 0 chr2 4994830 4995070 -248261513 + MLT1A1 LTR MaLR 125 364 -1 2131 155 111 5 chr2 4995225 4995612 -248260971 - MSTA LTR MaLR 0 428 1 8336 193 25 11 chr2 4995612 4997241 -248259342 - MSTA-int LTR MaLR 0 1651 1 1562 202 141 5 chr2 4997241 4997618 -248258965 - MSTA LTR MaLR 0 428 1 3523 278 49 43 chr2 4999175 4999235 -248257348 + L1M4 LINE L1 11 69 -6786 1572 206 0 3 chr2 4999235 4999547 -248257036 - AluJo SINE Alu 0 311 1 3523 278 49 43 chr2 4999547 5001235 -248255348 + L1M4 LINE L1 69 1792 -5063 1035 242 50 108 chr2 5001242 5002420 -248254163 + L1M4 LINE L1 2230 3265 -3692 1131 256 99 11 chr2 5002566 5002613 -248253970 + L1M4 LINE L1 3245 3286 -3671 4195 39 8 2 chr2 5002613 5003153 -248253430 + L1PA4 LINE L1 5621 6163 0 1131 256 99 11 chr2 5003153 5003628 -248252955 + L1M4 LINE L1 3286 3814 -3143 2727 225 19 0 chr2 5003691 5004203 -248252380 + L1P4 LINE L1 53 574 -6265 * 3594 228 50 27 chr2 5004192 5005348 -248251235 + L1P4 LINE L1 1849 3031 -3818 4035 203 48 14 chr2 5005348 5005617 -248250966 + L1P4 LINE L1 4935 5193 -1671 1825 176 80 5 chr2 5005617 5006015 -248250568 + MSTA LTR MaLR 1 428 0 4035 203 48 14 chr2 5006015 5006936 -248249647 + L1P4 LINE L1 5193 6163 -701 5011 148 17 1 chr2 5007036 5007869 -248248714 + L1PA16 LINE L1 5312 6157 -9 444 311 12 38 chr2 5007891 5008316 -248248267 + L1M4 LINE L1 3866 4279 -2678 2684 36 0 3 chr2 5008535 5008844 -248247739 - AluY SINE Alu -3 308 1 3987 20 0 0 chr2 5009235 5009693 -248246890 - L1PA3 LINE L1 0 6155 5698 5105 30 0 0 chr2 5009693 5010317 -248246266 + L1P LINE L1 4749 5372 -774 3297 137 32 35 chr2 5010880 5011480 -248245103 - Tigger1 DNA MER2_type 0 2418 1821 1585 85 89 4 chr2 5012347 5012593 -248243990 - L1PA11 LINE L1 -10 6164 5898 5661 156 60 9 chr2 5012593 5012708 -248243875 - Tigger1 DNA MER2_type -581 1837 1729 207 0 0 0 chr2 5012708 5012731 -248243852 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 5661 156 60 9 chr2 5012731 5014316 -248242267 - Tigger1 DNA MER2_type -689 1729 1 1651 201 3 7 chr2 5014349 5014647 -248241936 - AluJo SINE Alu -15 297 1 565 278 91 13 chr2 5014943 5015173 -248241410 - MLT1D LTR MaLR 0 505 258 307 294 134 21 chr2 5015287 5015481 -248241102 - LTR33 LTR ERVL -1 520 305 808 219 18 0 chr2 5015661 5015825 -248240758 - FRAM SINE Alu -9 167 1 241 295 79 43 chr2 5018061 5018200 -248238383 + L2 LINE L2 3128 3271 -1 317 185 64 25 chr2 5018240 5018397 -248238186 + (TG)n Simple_repeat Simple_repeat 1 163 0 216 47 78 47 chr2 5018407 5018471 -248238112 + (GTGTG)n Simple_repeat Simple_repeat 4 69 0 482 131 48 51 chr2 5018527 5018820 -248237763 + (GTGTG)n Simple_repeat Simple_repeat 1 292 0 437 97 30 67 chr2 5018833 5018998 -248237585 + (GTGTG)n Simple_repeat Simple_repeat 1 159 0 1135 218 44 21 chr2 5019506 5019840 -248236743 - MLT1A1 LTR MaLR -6 359 3 3801 182 14 7 chr2 5019928 5020638 -248235945 - MER72 LTR ERV1 0 722 8 332 133 84 12 chr2 5021558 5021641 -248234942 - L1P LINE L1 -2914 3232 3144 21 36 0 0 chr2 5021775 5021803 -248234780 + AT_rich Low_complexity Low_complexity 1 28 0 435 294 91 67 chr2 5022113 5022691 -248233892 - L1MC4 LINE L1 0 8042 7311 670 217 88 17 chr2 5022713 5023035 -248233548 + MLT1C LTR MaLR 1 373 -94 228 135 19 58 chr2 5023039 5023091 -248233492 + MLT1C LTR MaLR 336 385 -5 2814 131 7 0 chr2 5023096 5023523 -248233060 + MER57B LTR ERV1 5 434 0 234 261 143 62 chr2 5023567 5023728 -248232855 - L1MC4a LINE L1 -470 7338 7165 687 291 82 12 chr2 5023995 5024325 -248232258 - L1MC4 LINE L1 -985 7057 6705 1878 114 0 84 chr2 5024889 5025232 -248231351 - AluSx SINE Alu 0 317 1 748 221 63 0 chr2 5027377 5027535 -248229048 - FAM SINE Alu -7 168 1 357 222 28 46 chr2 5027952 5028060 -248228523 + MIR3 SINE MIR 97 202 -6 284 330 31 10 chr2 5028210 5028307 -248228276 + L2 LINE L2 3188 3286 -27 403 323 64 30 chr2 5028926 5029192 -248227391 - L1MEc LINE L1 -1800 4415 4141 654 304 48 23 chr2 5029316 5029881 -248226702 - L1MEc LINE L1 -2708 3507 2929 631 297 42 0 chr2 5029903 5030068 -248226515 + MER5A DNA MER1_type 4 175 -14 276 340 55 12 chr2 5030169 5030422 -248226161 - L1MEc LINE L1 -3427 2788 2525 2872 229 74 6 chr2 5030452 5031517 -248225066 - L1MB8 LINE L1 -14 6164 5027 31 0 0 0 chr2 5031520 5031551 -248225032 + AT_rich Low_complexity Low_complexity 1 31 0 297 308 117 10 chr2 5031581 5032068 -248224515 - L1MB8 LINE L1 -3486 2660 2122 517 269 39 6 chr2 5032122 5032278 -248224305 - L1MEc LINE L1 -4670 1726 1566 30 77 0 0 chr2 5033687 5033752 -248222831 + AT_rich Low_complexity Low_complexity 1 65 0 355 258 106 26 chr2 5034112 5034263 -248222320 - L1MEc LINE L1 -4913 1292 1130 2684 98 8 11 chr2 5034275 5034651 -248221932 - THE1C LTR MaLR 0 375 1 6831 113 39 137 chr2 5034678 5035540 -248221043 - THE1C-int LTR MaLR -303 1277 607 412 126 0 105 chr2 5035540 5035635 -248220948 - L1PA10 LINE L1 0 6168 6084 6831 113 39 137 chr2 5035635 5036188 -248220395 - THE1C-int LTR MaLR -973 607 1 2390 133 30 11 chr2 5036188 5036556 -248220027 - THE1C LTR MaLR 0 375 1 385 274 73 66 chr2 5036797 5037056 -248219527 - L1MEc LINE L1 -5278 927 667 2421 178 24 2 chr2 5037210 5037627 -248218956 + MSTB LTR MaLR 1 426 0 1226 225 107 24 chr2 5038405 5038743 -248217840 + MLT1B LTR MaLR 1 366 -24 1106 226 13 57 chr2 5038751 5039052 -248217531 + MLT1A2 LTR MaLR 74 361 -13 2327 110 0 0 chr2 5039323 5039633 -248216950 - AluSx SINE Alu -2 310 1 606 315 36 9 chr2 5039826 5040045 -248216538 - MIR SINE MIR -32 230 6 276 77 0 0 chr2 5041244 5041283 -248215300 + (TTTTC)n Simple_repeat Simple_repeat 2 40 0 215 329 89 13 chr2 5043034 5043113 -248213470 + MIR SINE MIR 25 109 -153 272 309 9 27 chr2 5044410 5044520 -248212063 - MLT1F LTR MaLR -82 460 353 521 252 65 0 chr2 5044603 5044742 -248211841 + MSTD LTR MaLR 1 148 -217 668 178 17 0 chr2 5044773 5044891 -248211692 + MSTD LTR MaLR 265 384 -12 429 320 35 58 chr2 5044970 5045229 -248211354 + MIR SINE MIR 10 262 0 200 294 11 43 chr2 5046164 5046348 -248210235 + (CATG)n Simple_repeat Simple_repeat 1 178 0 188 229 42 0 chr2 5048458 5048506 -248208077 - MIR3 SINE MIR -39 169 120 198 103 0 0 chr2 5048921 5048950 -248207633 + (TC)n Simple_repeat Simple_repeat 2 30 0 315 0 0 0 chr2 5049003 5049038 -248207545 + (CA)n Simple_repeat Simple_repeat 2 36 0 1924 186 38 22 chr2 5049807 5050254 -248206329 - L1MA8 LINE L1 -6 6285 5832 2183 157 10 15 chr2 5050254 5050643 -248205940 + L1MA8 LINE L1 5450 5836 -476 1670 146 143 32 chr2 5050726 5051069 -248205514 + MSTA LTR MaLR 19 399 -29 288 0 0 0 chr2 5051069 5051101 -248205482 + (TTA)n Simple_repeat Simple_repeat 2 33 0 5279 91 5 11 chr2 5051101 5051852 -248204731 - L1PA8 LINE L1 -11 6161 5415 525 77 0 0 chr2 5052330 5052395 -248204188 - MER30B DNA MER1_type -125 65 1 342 0 0 0 chr2 5052575 5052613 -248203970 + (TA)n Simple_repeat Simple_repeat 2 39 0 182 292 0 0 chr2 5054653 5054701 -248201882 + L2 LINE L2 3210 3257 -15 1831 214 82 52 chr2 5055380 5055488 -248201095 - L1ME1 LINE L1 -237 5998 5895 1951 125 3 30 chr2 5055488 5055784 -248200799 - AluSx SINE Alu -7 305 18 1831 214 82 52 chr2 5055784 5056238 -248200345 - L1ME1 LINE L1 -340 5895 5456 1925 148 0 0 chr2 5056238 5056544 -248200039 - AluSx SINE Alu 0 306 1 1831 214 82 52 chr2 5056544 5056924 -248199659 - L1ME1 LINE L1 -779 5456 5012 1151 279 38 18 chr2 5056920 5057468 -248199115 - L1ME1 LINE L1 -1647 4568 4010 * 274 269 19 28 chr2 5057842 5057950 -248198633 - L1M4 LINE L1 -969 5177 5071 2831 274 66 37 chr2 5058211 5059995 -248196588 - L1ME1 LINE L1 -2309 3906 2063 315 49 0 0 chr2 5059995 5060036 -248196547 + (TG)n Simple_repeat Simple_repeat 2 42 0 2831 274 66 37 chr2 5060036 5061154 -248195429 - L1ME1 LINE L1 -4152 2063 979 358 324 41 82 chr2 5061176 5061617 -248194966 - L1ME1 LINE L1 -5453 943 521 184 185 37 0 chr2 5063234 5063288 -248193295 + (CATATA)n Simple_repeat Simple_repeat 3 58 0 2239 108 3 0 chr2 5063627 5063924 -248192659 + AluSx SINE Alu 1 298 -14 465 342 129 32 chr2 5064225 5065055 -248191528 - L2 LINE L2 -653 2661 1752 286 278 35 28 chr2 5065183 5065327 -248191256 + L1MB8 LINE L1 93 237 -6622 305 301 65 75 chr2 5065814 5066000 -248190583 + L1MB8 LINE L1 1253 1436 -5511 1603 161 68 37 chr2 5066065 5066389 -248190194 + MER1B DNA MER1_type 4 337 0 1500 288 87 23 chr2 5066412 5067172 -248189411 + L1MB8 LINE L1 1380 2209 -4750 1805 167 7 10 chr2 5067172 5067472 -248189111 + AluJo SINE Alu 1 299 -13 1500 288 87 23 chr2 5067472 5067616 -248188967 + L1MB8 LINE L1 2209 2342 -4617 192 125 0 0 chr2 5067739 5067771 -248188812 + (CA)n Simple_repeat Simple_repeat 1 32 0 1497 270 80 32 chr2 5067912 5069184 -248187399 + L1MB8 LINE L1 2619 3927 -3030 * 1988 212 75 8 chr2 5069162 5069685 -248186898 + L1MB8 LINE L1 6197 6754 -235 1791 137 0 50 chr2 5069751 5070079 -248186504 - AluSq SINE Alu 0 313 1 2330 99 3 3 chr2 5071743 5072047 -248184536 + AluSp SINE Alu 1 304 -9 226 272 150 27 chr2 5072358 5072505 -248184078 + MIR SINE MIR 73 237 -25 342 247 139 38 chr2 5072789 5072947 -248183636 - MIR SINE MIR -42 220 47 1807 231 73 47 chr2 5072952 5073568 -248183015 + L1MC3 LINE L1 7153 7784 -1 2007 99 21 18 chr2 5073920 5074242 -248182341 + AluSg SINE Alu 1 323 0 857 161 61 11 chr2 5074345 5074525 -248182058 - L1MA8 LINE L1 -100 6191 6003 359 294 73 34 chr2 5075683 5075860 -248180723 - MIR SINE MIR 0 262 79 481 55 27 0 chr2 5075890 5075963 -248180620 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 1268 219 91 17 chr2 5076022 5076373 -248180210 - MLT2C1 LTR ERVL -20 377 1 1653 210 3 0 chr2 5076651 5076942 -248179641 + AluJo SINE Alu 1 292 -20 306 314 0 0 chr2 5076947 5077033 -248179550 - L1MC4 LINE L1 -1343 6699 6614 204 200 0 0 chr2 5077037 5077082 -248179501 + (TA)n Simple_repeat Simple_repeat 1 45 0 1108 192 39 13 chr2 5077109 5077338 -248179245 - MER46A DNA MER2_type -1 235 1 2032 154 3 0 chr2 5077541 5077846 -248178737 + AluSq SINE Alu 1 306 -7 356 250 21 21 chr2 5077847 5077987 -248178596 - L1MC4 LINE L1 -1 8041 7902 248 245 0 0 chr2 5077988 5078041 -248178542 + (CATATA)n Simple_repeat Simple_repeat 5 57 0 239 214 0 0 chr2 5078041 5078097 -248178486 - L1MC4 LINE L1 -1339 6703 6648 472 248 18 69 chr2 5078130 5078362 -248178221 - L1MC4 LINE L1 -100 7708 7585 218 289 0 24 chr2 5080029 5080112 -248176471 + CT-rich Low_complexity Low_complexity 2 82 0 569 362 138 23 chr2 5080144 5080485 -248176098 - L2 LINE L2 -2064 1250 829 1307 137 64 0 chr2 5080485 5080704 -248175879 - L1PA11 LINE L1 -2 6172 5940 569 362 138 23 chr2 5080704 5080876 -248175707 - L2 LINE L2 -2485 829 678 1605 181 6 33 chr2 5081288 5081361 -248175222 - L1MC2 LINE L1 -16 6328 6255 2254 118 37 11 chr2 5081361 5081716 -248174867 + THE1B LTR MaLR 1 364 0 1605 181 6 33 chr2 5081716 5081974 -248174609 - L1MC2 LINE L1 -89 6255 6006 508 286 158 22 chr2 5082156 5082467 -248174116 + LTR16A LTR ERVL 93 445 -5 888 186 0 13 chr2 5082915 5083071 -248173512 - FRAM SINE Alu -17 159 6 300 191 0 44 chr2 5084461 5084597 -248171986 + (TA)n Simple_repeat Simple_repeat 2 131 0 1584 207 13 10 chr2 5086815 5087115 -248169468 + AluJb SINE Alu 1 301 -11 24 0 0 0 chr2 5087432 5087456 -248169127 + AT_rich Low_complexity Low_complexity 1 24 0 1944 152 39 17 chr2 5087483 5087839 -248168744 - THE1B LTR MaLR 0 364 1 1592 127 0 9 chr2 5088630 5088859 -248167724 - AluSg/x SINE Alu -8 302 76 888 258 24 0 chr2 5089351 5089560 -248167023 + MER20 DNA MER1_type 6 219 0 458 227 47 7 chr2 5090104 5090254 -248166329 + Charlie5 DNA MER1_type 2469 2624 0 306 0 0 0 chr2 5090886 5090920 -248165663 + (TAAA)n Simple_repeat Simple_repeat 1 34 0 529 217 83 64 chr2 5090921 5091078 -248165505 + AluJb SINE Alu 136 295 -17 1645 121 22 0 chr2 5095837 5096068 -248160515 - AluSx SINE Alu -14 298 63 246 273 175 13 chr2 5096961 5097115 -248159468 - L1MC2 LINE L1 -2055 5753 5575 337 278 151 50 chr2 5097192 5097630 -248158953 + L1M4 LINE L1 3346 3863 -2283 2144 110 0 23 chr2 5097630 5097938 -248158645 + AluSg SINE Alu 1 301 -9 337 278 151 50 chr2 5097938 5098103 -248158480 + L1M4 LINE L1 3863 4010 -2136 224 209 0 0 chr2 5099956 5099999 -248156584 + GA-rich Low_complexity Low_complexity 1 43 0 2342 206 49 0 chr2 5100036 5100527 -248156056 - MLT2B2 LTR ERVL 0 515 1 180 125 0 0 chr2 5100751 5100783 -248155800 + (A)n Simple_repeat Simple_repeat 1 32 0 334 310 78 49 chr2 5100890 5101174 -248155409 - L1MC4a LINE L1 -1849 5959 5668 202 296 70 0 chr2 5101517 5101588 -248154995 - MIR SINE MIR -165 97 22 23 0 0 0 chr2 5102058 5102081 -248154502 + AT_rich Low_complexity Low_complexity 1 23 0 2385 96 0 0 chr2 5103239 5103541 -248153042 - AluSg SINE Alu -8 302 1 2088 150 0 0 chr2 5104647 5104947 -248151636 - AluSx SINE Alu -11 301 2 195 42 0 0 chr2 5106123 5106147 -248150436 + (T)n Simple_repeat Simple_repeat 1 24 0 336 209 77 44 chr2 5106376 5106467 -248150116 - L2 LINE L2 -20 3252 3159 227 360 12 12 chr2 5106637 5106723 -248149860 + L2 LINE L2 3227 3312 -1 206 327 72 39 chr2 5107012 5107220 -248149363 - L2 LINE L2 -1 3312 3098 488 205 60 30 chr2 5107543 5107709 -248148874 - MER58C DNA MER1_type -16 199 29 209 196 0 22 chr2 5107802 5107848 -248148735 + CT-rich Low_complexity Low_complexity 3 47 0 242 292 35 53 chr2 5108283 5108396 -248148187 + MIR SINE MIR 46 156 -106 4459 228 75 92 chr2 5109025 5111916 -248144667 + L1ME3A LINE L1 2194 5035 -1111 357 251 18 90 chr2 5111932 5112054 -248144529 + L1ME3A LINE L1 5772 5880 -290 1804 187 7 0 chr2 5112054 5112359 -248144224 + AluJb SINE Alu 1 307 -5 357 251 18 90 chr2 5112359 5112403 -248144180 + L1ME3A LINE L1 5880 5926 -244 556 228 122 6 chr2 5113028 5113208 -248143375 + MLT1J LTR MaLR 1 201 -310 244 252 205 39 chr2 5113523 5113650 -248142933 + MLT1J LTR MaLR 356 503 -8 426 307 95 35 chr2 5114276 5114592 -248141991 + LTR16C LTR ERVL 146 480 -11 27 0 0 0 chr2 5114625 5114652 -248141931 + AT_rich Low_complexity Low_complexity 1 27 0 189 309 81 24 chr2 5115004 5115127 -248141456 - MIR SINE MIR -14 248 119 2478 108 8 5 chr2 5115514 5115885 -248140698 - L1PA14 LINE L1 -3 6158 5787 283 315 72 9 chr2 5115898 5116009 -248140574 - MIR SINE MIR -60 148 31 200 208 0 38 chr2 5116177 5116230 -248140353 + CT-rich Low_complexity Low_complexity 4 54 0 221 307 94 45 chr2 5116450 5116694 -248139889 - L2 LINE L2 -354 2960 2705 192 356 87 67 chr2 5117094 5117347 -248139236 + L2 LINE L2 2953 3210 -62 306 294 61 81 chr2 5119043 5119240 -248137343 - MIR3 SINE MIR -9 199 7 28 0 0 0 chr2 5119248 5119276 -248137307 + AT_rich Low_complexity Low_complexity 1 28 0 202 283 0 0 chr2 5119426 5119486 -248137097 + (CATA)n Simple_repeat Simple_repeat 3 62 0 443 339 155 13 chr2 5119529 5119904 -248136679 - L3 LINE CR1 -112 1465 1038 351 0 0 0 chr2 5120008 5120047 -248136536 + (CA)n Simple_repeat Simple_repeat 2 40 0 182 262 107 0 chr2 5120241 5120325 -248136258 - L3 LINE CR1 -858 719 627 29 28 0 0 chr2 5120416 5120452 -248136131 + AT_rich Low_complexity Low_complexity 1 36 0 7904 94 0 0 chr2 5120965 5122058 -248134525 - L1P3 LINE L1 -4788 1673 581 6912 109 7 12 chr2 5122055 5123154 -248133429 + L1P LINE L1 1936 3029 -3117 * 2930 176 4 13 chr2 5123448 5123993 -248132590 - L1PA16 LINE L1 -10 6156 5617 2430 174 70 42 chr2 5124037 5124359 -248132224 - MLT2B3 LTR ERVL -8 546 202 207 0 0 0 chr2 5124359 5124382 -248132201 + (GA)n Simple_repeat Simple_repeat 2 24 0 2430 174 70 42 chr2 5124382 5124589 -248131994 - MLT2B3 LTR ERVL -352 202 2 3663 245 31 27 chr2 5124616 5126347 -248130236 + L1MB7 LINE L1 3997 5754 -430 559 77 26 0 chr2 5126347 5126425 -248130158 + MADE1 DNA Mariner 1 80 0 3663 245 31 27 chr2 5126425 5126758 -248129825 + L1MB7 LINE L1 5754 6084 -100 319 323 90 26 chr2 5127187 5127376 -248129207 + MIR SINE MIR 11 211 -51 419 291 99 6 chr2 5127540 5127722 -248128861 - LTR50 LTR ERVL -126 669 471 466 246 123 45 chr2 5127792 5128036 -248128547 - LTR50 LTR ERVL -532 263 1 1874 159 11 0 chr2 5128275 5128558 -248128025 + AluSx SINE Alu 1 286 -26 3914 157 24 10 chr2 5128807 5129520 -248127063 + MER50 LTR ERV1 1 723 -11 689 297 53 28 chr2 5129625 5130022 -248126561 + LTR16B LTR ERVL 37 443 -21 3384 200 67 4 chr2 5130073 5130849 -248125734 - L1MB8 LINE L1 -6 6172 5348 1403 147 0 32 chr2 5130885 5131103 -248125480 - AluSg/x SINE Alu -16 296 86 273 226 0 0 chr2 5131103 5131156 -248125427 - L1M4b LINE L1 -5898 961 909 471 218 0 10 chr2 5131165 5131266 -248125317 + Tigger2a DNA MER2_type 1 100 -334 2042 234 102 22 chr2 5131266 5131936 -248124647 - MER50 LTR ERV1 0 734 12 2105 149 6 3 chr2 5131940 5132290 -248124293 + Tigger2a DNA MER2_type 94 444 0 757 305 59 25 chr2 5132301 5132708 -248123875 - L1M4b LINE L1 -5968 891 471 444 282 169 23 chr2 5132746 5133012 -248123571 - L1M4b LINE L1 -6480 379 75 243 304 29 0 chr2 5133483 5133552 -248123031 - MIR3 SINE MIR -27 181 111 342 256 277 0 chr2 5133784 5133921 -248122662 + MER5B DNA MER1_type 1 175 -3 269 303 111 0 chr2 5134735 5134834 -248121749 - MIR SINE MIR -61 147 38 236 309 48 40 chr2 5134858 5134984 -248121599 + L2 LINE L2 3144 3270 -2 435 343 48 6 chr2 5135304 5135470 -248121113 + MER5B DNA MER1_type 6 178 0 758 154 155 2 chr2 5137465 5137688 -248118895 + L1MA9 LINE L1 6055 6312 0 2152 102 78 90 chr2 5137781 5138214 -248118369 + MSTA LTR MaLR 1 428 0 333 118 0 0 chr2 5138314 5138325 -248118258 + (TG)n Simple_repeat Simple_repeat 1 62 0 333 118 0 0 chr2 5138325 5138376 -248118207 + (TG)n Simple_repeat Simple_repeat 2 52 0 492 311 53 21 chr2 5139635 5139825 -248116758 - MIR SINE MIR -44 218 23 2576 162 80 53 chr2 5139947 5140534 -248116049 - MER6A DNA MER2_type 0 605 3 636 270 76 8 chr2 5140780 5140988 -248115595 - MIR SINE MIR -49 213 1 21 0 0 0 chr2 5141230 5141251 -248115332 + AT_rich Low_complexity Low_complexity 1 21 0 286 286 29 6 chr2 5142551 5142726 -248113857 + (TA)n Simple_repeat Simple_repeat 2 180 0 207 0 0 0 chr2 5142854 5142877 -248113706 + (A)n Simple_repeat Simple_repeat 1 23 0 2053 121 16 7 chr2 5143143 5143472 -248113111 + AluSx SINE Alu 1 312 0 328 299 142 0 chr2 5143569 5143703 -248112880 - MIR SINE MIR -5 257 105 223 200 17 17 chr2 5143728 5143788 -248112795 + T-rich Low_complexity Low_complexity 1 60 0 29 47 0 0 chr2 5144378 5144421 -248112162 + AT_rich Low_complexity Low_complexity 1 43 0 2593 40 0 0 chr2 5146204 5146501 -248110082 - AluY SINE Alu -14 297 1 351 107 40 0 chr2 5147230 5147305 -248109278 + (CA)n Simple_repeat Simple_repeat 2 79 0 213 39 0 0 chr2 5147805 5147831 -248108752 + (T)n Simple_repeat Simple_repeat 1 26 0 1165 225 40 25 chr2 5147905 5148230 -248108353 - MER93a LTR ERV1 -10 392 63 336 167 0 0 chr2 5148338 5148410 -248108173 + T-rich Low_complexity Low_complexity 1 72 0 241 466 8 0 chr2 5149022 5149140 -248107443 + L2 LINE L2 3141 3259 -13 33 25 0 0 chr2 5149533 5149573 -248107010 + AT_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr2 5149773 5149795 -248106788 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 5151015 5151037 -248105546 + AT_rich Low_complexity Low_complexity 1 22 0 2542 62 0 0 chr2 5151683 5151992 -248104591 - AluY SINE Alu -2 309 1 197 143 29 0 chr2 5152569 5152604 -248103979 + L2 LINE L2 3216 3251 -21 755 279 101 13 chr2 5152707 5153023 -248103560 - MLT1A1 LTR MaLR -2 363 20 317 248 8 0 chr2 5153272 5153401 -248103182 + (TG)n Simple_repeat Simple_repeat 1 130 0 180 217 0 0 chr2 5153443 5153489 -248103094 + (TG)n Simple_repeat Simple_repeat 1 46 0 25 0 0 0 chr2 5154356 5154381 -248102202 + AT_rich Low_complexity Low_complexity 1 25 0 190 360 73 40 chr2 5154425 5154575 -248102008 + MIR3 SINE MIR 22 176 -32 2729 229 30 30 chr2 5154750 5155587 -248100996 - L1MD1 LINE L1 -2 6240 5404 1187 186 11 30 chr2 5155589 5155853 -248100730 + MLT1B LTR MaLR 3 261 -129 669 108 0 10 chr2 5205855 5205957 -248050626 - AluS SINE Alu -211 101 1 531 271 65 28 chr2 5206029 5206243 -248050340 - MIR SINE MIR -1 261 40 1755 175 14 14 chr2 5206443 5206740 -248049843 - AluJb SINE Alu -15 297 1 1937 166 48 45 chr2 5208659 5209015 -248047568 + LTR18A LTR ERVL 1 357 0 2272 12 0 0 chr2 5209464 5209714 -248046869 + AluYa5 SINE Alu 62 311 0 181 125 42 28 chr2 5209962 5210034 -248046549 + (TA)n Simple_repeat Simple_repeat 2 74 0 229 165 39 10 chr2 5210078 5210181 -248046402 + (TA)n Simple_repeat Simple_repeat 2 107 0 28 0 0 0 chr2 5210256 5210284 -248046299 + AT_rich Low_complexity Low_complexity 1 28 0 253 348 121 9 chr2 5211509 5211637 -248044946 + MIR SINE MIR 13 147 -61 25 0 0 0 chr2 5211988 5212013 -248044570 + AT_rich Low_complexity Low_complexity 1 25 0 471 211 9 0 chr2 5212046 5212155 -248044428 + L1MB1 LINE L1 6050 6159 -9 3542 176 45 32 chr2 5212182 5212877 -248043706 + MER44D DNA MER2_type 2 705 0 565 263 0 0 chr2 5212894 5213046 -248043537 + L1MA10 LINE L1 6181 6332 -2 2052 137 3 10 chr2 5213224 5213523 -248043060 + AluSx SINE Alu 1 297 -15 339 25 0 0 chr2 5213565 5213605 -248042978 + (TG)n Simple_repeat Simple_repeat 2 41 0 286 341 105 44 chr2 5213939 5214588 -248041995 - L2 LINE L2 -261 3052 2362 239 318 25 117 chr2 5214614 5214853 -248041730 - MIR SINE MIR -35 227 11 1658 198 87 15 chr2 5214869 5215515 -248041068 - L1MD1 LINE L1 -303 6333 5592 2043 164 0 0 chr2 5215529 5215840 -248040743 + AluSx SINE Alu 1 311 -1 849 110 0 0 chr2 5215846 5215973 -248040610 + (GAAA)n Simple_repeat Simple_repeat 2 128 0 312 284 0 21 chr2 5215975 5216070 -248040513 - L1MD1 LINE L1 -955 5585 5493 3118 215 46 48 chr2 5216164 5217365 -248039218 - L1MD1 LINE L1 -4195 2345 1147 221 121 0 121 chr2 5217534 5217592 -248038991 + L2 LINE L2 3222 3272 0 541 204 32 51 chr2 5217649 5217806 -248038777 - MER3 DNA MER1_type 0 209 56 3338 75 23 0 chr2 5219651 5220094 -248036489 - MLT2A2 LTR ERVL 0 453 1 37 76 0 0 chr2 5220241 5220320 -248036263 + AT_rich Low_complexity Low_complexity 1 79 0 190 205 26 0 chr2 5220330 5220408 -248036175 + (TA)n Simple_repeat Simple_repeat 2 81 0 34 0 0 0 chr2 5220408 5220442 -248036141 + AT_rich Low_complexity Low_complexity 1 34 0 504 171 29 6 chr2 5220481 5220656 -248035927 + (TA)n Simple_repeat Simple_repeat 1 179 0 187 407 68 6 chr2 5221609 5221771 -248034812 - MIR SINE MIR -32 230 59 2621 198 86 34 chr2 5221935 5222372 -248034211 - L1MB3 LINE L1 -28 6155 5742 2471 68 0 7 chr2 5222372 5222681 -248033902 + AluY SINE Alu 1 307 -4 309 51 0 0 chr2 5222683 5222722 -248033861 + (TA)n Simple_repeat Simple_repeat 1 39 0 2621 198 86 34 chr2 5222722 5222982 -248033601 - L1MB3 LINE L1 -441 5742 5419 409 332 76 43 chr2 5224682 5224920 -248031663 + L2 LINE L2 2447 2675 -638 1753 154 146 16 chr2 5224920 5225296 -248031287 + MSTA LTR MaLR 2 426 -2 409 332 76 43 chr2 5225296 5225698 -248030885 + L2 LINE L2 2675 3313 0 2435 56 10 0 chr2 5226434 5226740 -248029843 - AluY SINE Alu -2 309 1 271 282 0 13 chr2 5227118 5227196 -248029387 - MLT1J2 LTR MaLR -29 421 345 247 353 12 0 chr2 5227582 5227667 -248028916 + MIR3 SINE MIR 92 177 -31 771 247 0 5 chr2 5228064 5228250 -248028333 - MER58A DNA MER1_type -37 187 3 400 82 41 52 chr2 5228395 5228492 -248028091 + CT-rich Low_complexity Low_complexity 5 100 0 998 178 12 0 chr2 5228498 5228667 -248027916 - AluSg/x SINE Alu -9 303 133 1155 176 69 4 chr2 5228667 5228912 -248027671 - L1MA8 LINE L1 -52 6239 5979 639 215 204 18 chr2 5229070 5229480 -248027103 - MLT1F1 LTR MaLR -6 561 60 1750 177 10 7 chr2 5231135 5231440 -248025143 - AluSx SINE Alu -6 306 1 1605 173 78 0 chr2 5231478 5231761 -248024822 + AluSg SINE Alu 1 305 -5 271 244 213 8 chr2 5231869 5231996 -248024587 + L2 LINE L2 3161 3313 0 305 343 70 6 chr2 5235267 5235439 -248021144 - L1MDa LINE L1 -6261 279 97 27 81 0 0 chr2 5235442 5235504 -248021079 + AT_rich Low_complexity Low_complexity 1 62 0 292 205 33 8 chr2 5235543 5235665 -248020918 + (TA)n Simple_repeat Simple_repeat 2 126 0 413 339 44 42 chr2 5235750 5236780 -248019803 - L1MEc LINE L1 -4715 1595 530 2681 117 0 3 chr2 5238200 5238576 -248018007 + THE1C LTR MaLR 1 375 0 210 237 85 0 chr2 5239768 5239827 -248016756 + L2 LINE L2 3200 3263 -50 218 256 268 18 chr2 5240158 5240326 -248016257 + MIR SINE MIR 14 223 -39 242 250 115 13 chr2 5241100 5241256 -248015327 + L1ME4a LINE L1 5791 5962 -159 28 29 0 0 chr2 5242353 5242388 -248014195 + AT_rich Low_complexity Low_complexity 1 35 0 221 331 81 47 chr2 5244830 5245002 -248011581 + MER5A DNA MER1_type 1 178 -11 310 351 48 30 chr2 5245219 5245384 -248011199 - L2 LINE L2 -385 2929 2762 24 0 0 0 chr2 5245581 5245605 -248010978 + AT_rich Low_complexity Low_complexity 1 24 0 203 325 62 100 chr2 5245616 5245776 -248010807 - MIR3 SINE MIR -14 194 41 233 268 101 67 chr2 5248108 5248317 -248008266 - L1ME LINE L1 -254 5867 5652 208 289 0 33 chr2 5248518 5248608 -248007975 + (TA)n Simple_repeat Simple_repeat 1 87 0 1177 106 29 114 chr2 5248900 5248920 -248007663 + MER30 DNA MER1_type 6 26 -204 2788 121 0 0 chr2 5248920 5249284 -248007299 + THE1B LTR MaLR 1 364 0 1177 106 29 114 chr2 5249284 5249345 -248007238 + MER30 DNA MER1_type 26 91 -139 1985 155 0 16 chr2 5249345 5249662 -248006921 + AluSx SINE Alu 1 312 0 1177 106 29 114 chr2 5249662 5249825 -248006758 + MER30 DNA MER1_type 91 230 0 605 238 119 61 chr2 5249847 5250208 -248006375 + Charlie4a DNA MER1_type 23 404 -104 369 43 0 0 chr2 5250210 5250257 -248006326 + (TG)n Simple_repeat Simple_repeat 2 48 0 327 336 57 0 chr2 5252546 5252686 -248003897 + MIR SINE MIR 50 197 -65 208 330 96 0 chr2 5252989 5253104 -248003479 + L2 LINE L2 3188 3313 0 3591 178 60 33 chr2 5253218 5253982 -248002601 - LTR1 LTR ERV1 0 785 1 1598 225 76 57 chr2 5254207 5254728 -248001855 - MLT2B3 LTR ERVL -33 506 1 331 239 0 80 chr2 5255264 5255352 -248001231 - L2 LINE L2 -9 3304 3224 29 60 0 0 chr2 5256522 5256572 -248000011 + AT_rich Low_complexity Low_complexity 1 50 0 1002 215 27 32 chr2 5257449 5257668 -247998915 - MER20 DNA MER1_type -1 218 1 261 268 98 41 chr2 5257925 5258048 -247998535 + L2 LINE L2 3137 3266 -6 184 288 89 85 chr2 5259294 5259530 -247997053 + L2 LINE L2 3077 3313 0 2091 130 0 16 chr2 5260128 5260444 -247996139 + AluSx SINE Alu 1 311 -1 26 0 0 0 chr2 5261022 5261048 -247995535 + AT_rich Low_complexity Low_complexity 1 26 0 1187 193 121 43 chr2 5261128 5261462 -247995121 - MLT1A1 LTR MaLR -7 421 1 26 0 0 0 chr2 5261624 5261650 -247994933 + AT_rich Low_complexity Low_complexity 1 26 0 755 194 0 15 chr2 5261662 5261796 -247994787 - FLAM_C SINE Alu -7 136 5 1032 247 18 0 chr2 5262076 5262303 -247994280 - MLT1F1 LTR MaLR -7 560 330 252 212 47 35 chr2 5262423 5262508 -247994075 - MLT1F1 LTR MaLR -481 86 1 2240 91 14 0 chr2 5263142 5263438 -247993145 + AluSp SINE Alu 1 300 -13 387 298 13 33 chr2 5263573 5263724 -247992859 + GA-rich Low_complexity Low_complexity 1 148 0 23 33 0 0 chr2 5265294 5265324 -247991259 + AT_rich Low_complexity Low_complexity 1 30 0 28 29 0 0 chr2 5265348 5265383 -247991200 + AT_rich Low_complexity Low_complexity 1 35 0 21 82 0 0 chr2 5265440 5265489 -247991094 + AT_rich Low_complexity Low_complexity 1 49 0 4060 232 113 40 chr2 5265786 5267070 -247989513 + Charlie1a DNA MER1_type 19 1396 -59 263 308 88 13 chr2 5267084 5267243 -247989340 - L2 LINE L2 -2009 1305 1135 2099 119 0 44 chr2 5268136 5268456 -247988127 - AluSx SINE Alu -6 306 1 21 36 0 0 chr2 5268728 5268756 -247987827 + AT_rich Low_complexity Low_complexity 1 28 0 333 82 0 0 chr2 5269465 5269514 -247987069 + (CA)n Simple_repeat Simple_repeat 2 50 0 216 268 42 38 chr2 5271204 5271289 -247985294 - MIR SINE MIR -68 140 53 2732 32 0 0 chr2 5271597 5271907 -247984676 - AluY SINE Alu 0 311 2 208 164 0 36 chr2 5273494 5273549 -247983034 + CT-rich Low_complexity Low_complexity 4 56 0 310 160 13 13 chr2 5273605 5273680 -247982903 + CT-rich Low_complexity Low_complexity 4 78 0 201 313 9 18 chr2 5273991 5274103 -247982480 + GA-rich Low_complexity Low_complexity 4 114 0 199 195 18 43 chr2 5274522 5274686 -247981897 + (TATAA)n Simple_repeat Simple_repeat 3 162 0 395 348 111 14 chr2 5275239 5275518 -247981065 - L3 LINE CR1 -25 1552 1247 793 164 0 0 chr2 5275519 5275635 -247980948 + FLAM_C SINE Alu 3 118 -15 452 126 11 0 chr2 5275944 5276031 -247980552 + (CA)n Simple_repeat Simple_repeat 1 88 0 249 326 41 10 chr2 5276378 5276476 -247980107 + MIR3 SINE MIR 62 162 -46 186 43 0 0 chr2 5277595 5277618 -247978965 + (GA)n Simple_repeat Simple_repeat 2 24 0 223 225 0 56 chr2 5280086 5280157 -247976426 + (TG)n Simple_repeat Simple_repeat 2 68 0 2483 74 3 10 chr2 5280328 5280637 -247975946 + AluSp SINE Alu 1 307 -6 217 259 46 46 chr2 5281420 5281528 -247975055 + MIR SINE MIR 112 219 -43 6469 96 15 14 chr2 5283154 5284520 -247972063 + L1PA12 LINE L1 4795 6168 0 1928 149 3 3 chr2 5284933 5285228 -247971355 + AluJo SINE Alu 1 295 -17 1942 91 88 0 chr2 5285379 5285653 -247970930 + AluSp SINE Alu 2 299 -14 947 253 83 41 chr2 5285713 5286006 -247970577 - MLT1E2 LTR MaLR -87 539 225 2339 163 49 5 chr2 5286006 5286416 -247970167 + MSTA LTR MaLR 1 428 0 947 253 83 41 chr2 5286416 5286509 -247970074 - MLT1E2 LTR MaLR -401 225 137 316 270 45 27 chr2 5287123 5287234 -247969349 + HAL1b LINE L1 621 733 -615 259 231 88 27 chr2 5287854 5288001 -247968582 + L1MDa LINE L1 2468 2623 -3917 2755 23 0 0 chr2 5288263 5288573 -247968010 + AluYa5 SINE Alu 1 310 -1 415 304 53 6 chr2 5289227 5289398 -247967185 - MIR SINE MIR -72 190 12 1026 262 75 75 chr2 5289401 5290290 -247966293 + MER45C DNA AcHobo 1 943 -10 390 305 0 0 chr2 5290379 5290484 -247966099 - L3 LINE CR1 -272 1305 1201 2295 118 0 0 chr2 5290725 5291038 -247965545 + AluSq SINE Alu 1 313 0 237 278 0 0 chr2 5292813 5292903 -247963680 + (TA)n Simple_repeat Simple_repeat 1 90 0 218 402 0 0 chr2 5292988 5293080 -247963503 - MIR3 SINE MIR -16 192 101 223 346 122 19 chr2 5293893 5294049 -247962534 - MIR SINE MIR -71 191 20 261 83 0 0 chr2 5294158 5294194 -247962389 + (T)n Simple_repeat Simple_repeat 1 36 0 234 62 0 0 chr2 5294678 5294710 -247961873 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 25 75 0 0 chr2 5294889 5294942 -247961641 + AT_rich Low_complexity Low_complexity 1 53 0 506 277 63 51 chr2 5294957 5295210 -247961373 + L2 LINE L2 3056 3311 -2 267 79 0 0 chr2 5295688 5295726 -247960857 + (TG)n Simple_repeat Simple_repeat 2 39 0 824 244 60 69 chr2 5297349 5297672 -247958911 - L2 LINE L2 -359 2913 2581 317 363 65 0 chr2 5298198 5298322 -247958261 - L2 LINE L2 0 3272 3141 1471 80 99 0 chr2 5299219 5299431 -247957152 + L1PA7 LINE L1 5917 6149 -5 417 198 12 0 chr2 5300054 5300135 -247956448 - LTR16A1 LTR ERVL -2 455 374 278 311 83 0 chr2 5300320 5300500 -247956083 - LTR16A1 LTR ERVL -116 341 147 524 234 42 42 chr2 5301258 5301450 -247955133 + MLT1J1 LTR MaLR 18 209 -237 248 266 16 40 chr2 5301560 5301684 -247954899 - LTR33 LTR ERVL -2 519 399 687 320 32 41 chr2 5302159 5302500 -247954083 - L3 LINE CR1 -175 1402 1065 724 244 37 5 chr2 5302638 5302855 -247953728 - MER58A DNA MER1_type 0 224 1 411 212 18 44 chr2 5302866 5302979 -247953604 + MER5B DNA MER1_type 4 113 -65 861 234 70 8 chr2 5302982 5303089 -247953494 - L1MDa LINE L1 -6239 301 202 1699 171 23 10 chr2 5303089 5303394 -247953189 + AluJo SINE Alu 1 309 -3 861 234 70 8 chr2 5303394 5303542 -247953041 - L1MDa LINE L1 -6338 202 30 592 218 67 22 chr2 5303905 5304084 -247952499 + MER5A DNA MER1_type 3 189 0 487 301 0 28 chr2 5304136 5304279 -247952304 - MER5B DNA MER1_type -3 175 37 290 181 0 14 chr2 5304417 5304489 -247952094 + (TA)n Simple_repeat Simple_repeat 2 72 0 350 281 0 0 chr2 5304496 5304585 -247951998 - L1MC4 LINE L1 -1339 6703 6615 1791 198 147 2 chr2 5304596 5305011 -247951572 - MLT2B2 LTR ERVL -40 475 1 1298 79 0 6 chr2 5305473 5305651 -247950932 + L1PA5 LINE L1 5978 6154 0 259 329 61 13 chr2 5306111 5306342 -247950241 - HAL1 LINE L1 -2063 444 203 436 68 27 14 chr2 5306619 5306692 -247949891 + (GAAAA)n Simple_repeat Simple_repeat 2 75 0 282 73 0 0 chr2 5306918 5306959 -247949624 + (A)n Simple_repeat Simple_repeat 1 41 0 34 42 0 0 chr2 5307654 5307702 -247948881 + AT_rich Low_complexity Low_complexity 1 48 0 411 282 15 0 chr2 5308524 5308655 -247947928 + MER94 DNA DNA 1 133 -1 2072 137 5 67 chr2 5308766 5309153 -247947430 - THE1B LTR MaLR 0 364 2 409 98 49 16 chr2 5309503 5309626 -247946957 + (TA)n Simple_repeat Simple_repeat 2 128 0 657 64 70 18 chr2 5309640 5309811 -247946772 + (TA)n Simple_repeat Simple_repeat 1 180 0 2688 20 0 0 chr2 5311626 5311928 -247944655 - AluY SINE Alu -9 302 1 24 32 0 0 chr2 5313171 5313202 -247943381 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr2 5313729 5313752 -247942831 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 5317081 5317102 -247939481 + AT_rich Low_complexity Low_complexity 1 21 0 498 221 66 12 chr2 5317838 5318004 -247938579 + MER39 LTR ERV1 1 170 -372 453 206 39 58 chr2 5317985 5318140 -247938443 + MER39 LTR ERV1 357 508 -199 * 2411 72 0 0 chr2 5318183 5318475 -247938108 - AluY SINE Alu -19 292 1 306 194 0 97 chr2 5318504 5318597 -247937986 - AluJ/FLAM SINE Alu -217 85 2 1525 178 6 54 chr2 5318621 5318936 -247937647 - AluJo SINE Alu -12 300 1 257 397 7 14 chr2 5319446 5319592 -247936991 - L3 LINE CR1 -4 1573 1429 2242 188 60 34 chr2 5319595 5320131 -247936452 - MLT2B3 LTR ERVL -1 553 4 1779 159 48 7 chr2 5320146 5320436 -247936147 + AluJb SINE Alu 1 302 -10 5274 188 34 54 chr2 5320437 5321748 -247934835 - ERVL-B3 LTR ERVL -8 5756 4473 2288 170 5 2 chr2 5321724 5322125 -247934458 + ERVL LTR ERVL 4077 4478 -1286 * 1922 250 78 18 chr2 5322125 5322846 -247933737 - MLT-int LTR MaLR -59 1676 864 1381 190 23 50 chr2 5322851 5323193 -247933390 - MSTD LTR MaLR -63 333 1 266 342 102 16 chr2 5323220 5323407 -247933176 - L3 LINE CR1 -208 1369 1167 277 317 58 0 chr2 5324267 5324371 -247932212 + L2 LINE L2 3203 3312 -1 291 54 0 0 chr2 5324455 5324492 -247932091 + (TG)n Simple_repeat Simple_repeat 2 38 0 215 289 64 64 chr2 5326145 5326318 -247930265 - MIR SINE MIR 0 262 90 2297 98 0 10 chr2 5326344 5326651 -247929932 + AluSc SINE Alu 1 304 -5 1797 155 67 28 chr2 5327704 5328065 -247928518 + THE1C LTR MaLR 1 375 0 321 355 61 20 chr2 5328499 5328696 -247927887 + L1MC/D LINE L1 5540 5744 -2064 2642 42 0 0 chr2 5329462 5329773 -247926810 - AluY SINE Alu 0 311 1 521 184 64 0 chr2 5329779 5329888 -247926695 - MLT1A1 LTR MaLR -249 116 1 235 283 17 0 chr2 5330287 5330347 -247926236 - MIR SINE MIR -112 96 36 2496 67 0 0 chr2 5330531 5330830 -247925753 + AluY SINE Alu 1 299 -12 1831 156 54 0 chr2 5330862 5331196 -247925387 - THE1C LTR MaLR 0 375 24 2487 67 0 0 chr2 5331688 5331986 -247924597 + AluY SINE Alu 1 298 -13 2032 150 50 6 chr2 5332018 5332377 -247924206 - THE1C LTR MaLR 0 375 1 2671 38 0 6 chr2 5332667 5332980 -247923603 + AluY SINE Alu 1 311 0 394 298 88 23 chr2 5334178 5334349 -247922234 - L1ME3A LINE L1 -24 6146 5965 548 297 176 11 chr2 5334414 5334976 -247921607 - L1ME3A LINE L1 -211 5951 5297 554 272 92 87 chr2 5335186 5335277 -247921306 - L1ME3A LINE L1 -1310 4836 4747 2222 129 0 0 chr2 5335277 5335587 -247920996 - AluSg SINE Alu 0 310 1 554 272 92 87 chr2 5335587 5337649 -247918934 - L1ME3A LINE L1 -1399 4747 2674 334 223 16 8 chr2 5337665 5337786 -247918797 + CT-rich Low_complexity Low_complexity 3 124 0 494 274 72 33 chr2 5337811 5338201 -247918382 - L1ME3A LINE L1 -3528 2618 2214 348 211 0 0 chr2 5338904 5338980 -247917603 + (TA)n Simple_repeat Simple_repeat 1 76 0 239 79 26 0 chr2 5338979 5339017 -247917566 + (GA)n Simple_repeat Simple_repeat 2 40 0 * 1680 184 0 7 chr2 5339017 5339295 -247917288 - AluSx SINE Alu -30 282 7 28 79 0 0 chr2 5340171 5340234 -247916349 + AT_rich Low_complexity Low_complexity 1 63 0 225 0 0 0 chr2 5340438 5340463 -247916120 + (TG)n Simple_repeat Simple_repeat 1 25 0 1292 180 6 0 chr2 5341858 5342129 -247914454 - MER33 DNA MER1_type -58 266 1 536 282 44 44 chr2 5342707 5342913 -247913670 + MIR SINE MIR 41 246 -16 201 94 0 0 chr2 5342920 5342952 -247913631 + (TAG)n Simple_repeat Simple_repeat 1 32 0 228 143 0 0 chr2 5343948 5343990 -247912593 + (TC)n Simple_repeat Simple_repeat 2 43 0 2429 79 0 0 chr2 5344503 5344806 -247911777 + AluY SINE Alu 1 303 -8 252 169 102 0 chr2 5344983 5345042 -247911541 + MIR SINE MIR 87 151 -111 339 311 101 29 chr2 5345748 5345986 -247910597 + MIR SINE MIR 3 257 -5 554 352 67 15 chr2 5346547 5346950 -247909633 - L2 LINE L2 -444 2870 2447 2403 82 0 13 chr2 5348345 5348660 -247907923 - AluY SINE Alu 0 311 1 261 250 24 12 chr2 5349554 5349638 -247906945 + (TAGA)n Simple_repeat Simple_repeat 4 88 0 843 130 15 21 chr2 5350671 5351008 -247905575 + (TG)n Simple_repeat Simple_repeat 1 334 0 1463 105 0 0 chr2 5351501 5351691 -247904892 + AluSg/x SINE Alu 110 299 -13 412 181 11 53 chr2 5355122 5355216 -247901367 + MLT1J2 LTR MaLR 361 450 0 316 260 27 0 chr2 5355292 5355442 -247901141 + (TA)n Simple_repeat Simple_repeat 2 155 0 300 237 26 0 chr2 5355547 5355720 -247900863 + (TA)n Simple_repeat Simple_repeat 1 177 0 202 429 18 39 chr2 5356248 5356343 -247900240 - L2 LINE L2 -70 3202 3106 1996 195 0 11 chr2 5356343 5356712 -247899871 - MLT1A1 LTR MaLR 0 365 1 202 429 18 39 chr2 5356712 5356896 -247899687 - L2 LINE L2 -166 3106 2929 228 35 0 0 chr2 5357793 5357822 -247898761 + (CA)n Simple_repeat Simple_repeat 2 30 0 496 304 81 20 chr2 5360377 5360692 -247895891 + L1ME LINE L1 5486 5820 -301 229 283 0 0 chr2 5360889 5360942 -247895641 + (CATA)n Simple_repeat Simple_repeat 2 54 0 351 306 99 84 chr2 5361286 5361675 -247894908 + L1ME4a LINE L1 5304 5686 -435 180 77 0 0 chr2 5361675 5361701 -247894882 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1658 180 3 28 chr2 5361704 5361993 -247894590 - AluJo SINE Alu -30 282 1 351 306 99 84 chr2 5361993 5362073 -247894510 + L1ME4a LINE L1 5687 5786 -335 332 276 163 23 chr2 5362111 5362332 -247894251 - MLT1J2 LTR MaLR -3 447 196 355 220 30 30 chr2 5363625 5363725 -247892858 + L1ME4a LINE L1 5955 6054 -67 2128 107 3 3 chr2 5364073 5364362 -247892221 + AluSx SINE Alu 3 291 -21 721 216 42 6 chr2 5364390 5364557 -247892026 + MSTD LTR MaLR 223 395 -1 384 252 172 7 chr2 5365666 5365817 -247890766 + MER117 DNA MER1_type 21 196 -1 2058 137 0 19 chr2 5366057 5366371 -247890212 - AluSx SINE Alu -4 308 1 634 339 29 4 chr2 5367348 5367622 -247888961 - L2 LINE L2 -1318 1996 1716 947 176 0 13 chr2 5369893 5370052 -247886531 + FRAM SINE Alu 1 157 -9 22 80 0 0 chr2 5372293 5372343 -247884240 + AT_rich Low_complexity Low_complexity 1 50 0 22 0 0 0 chr2 5372372 5372394 -247884189 + AT_rich Low_complexity Low_complexity 1 22 0 1088 262 28 6 chr2 5372522 5372839 -247883744 - MER33 DNA MER1_type 0 324 1 325 299 60 22 chr2 5374671 5374805 -247881778 - MIR3 SINE MIR -59 149 11 231 347 51 10 chr2 5374932 5375078 -247881505 - MER5A DNA MER1_type -5 173 24 250 258 0 16 chr2 5375765 5375827 -247880756 - MLT1L LTR MaLR -111 504 444 430 302 58 0 chr2 5375827 5375966 -247880617 + MERVL LTR ERVL 4166 4312 -1173 1384 174 16 172 chr2 5376035 5376478 -247880105 + MLT1A2 LTR MaLR 1 374 0 256 140 0 0 chr2 5376886 5376936 -247879647 + L1MC4 LINE L1 6656 6705 -1337 257 109 22 0 chr2 5376936 5376982 -247879601 + (TA)n Simple_repeat Simple_repeat 1 47 0 2108 128 3 3 chr2 5377184 5377481 -247879102 + AluSx SINE Alu 9 305 -7 292 208 20 40 chr2 5378047 5378148 -247878435 + (TATG)n Simple_repeat Simple_repeat 2 100 0 185 156 0 22 chr2 5378163 5378208 -247878375 + (TG)n Simple_repeat Simple_repeat 1 44 0 210 71 0 0 chr2 5378379 5378407 -247878176 + (GAAA)n Simple_repeat Simple_repeat 2 29 0 363 283 79 12 chr2 5379280 5379452 -247877131 + MIR SINE MIR 31 209 -53 185 308 66 22 chr2 5379593 5379684 -247876899 + MIR SINE MIR 70 164 -98 283 226 39 77 chr2 5380724 5380991 -247875592 + (CCCA)n Simple_repeat Simple_repeat 1 256 0 262 203 0 31 chr2 5381550 5381614 -247874969 + G-rich Low_complexity Low_complexity 4 65 0 27 0 0 0 chr2 5381704 5381731 -247874852 + AT_rich Low_complexity Low_complexity 1 27 0 683 224 12 12 chr2 5381888 5382022 -247874561 - MER5A DNA MER1_type -8 181 45 1594 222 101 9 chr2 5382022 5382450 -247874133 + MLT1C LTR MaLR 1 467 0 683 224 12 12 chr2 5382450 5382485 -247874098 - MER5A DNA MER1_type -143 46 12 1633 160 63 3 chr2 5382608 5382895 -247873688 + MER50 LTR ERV1 3 306 -428 1279 189 44 36 chr2 5382897 5383027 -247873556 + MER50 LTR ERV1 434 562 -172 2059 125 20 17 chr2 5383027 5383324 -247873259 - AluSx SINE Alu -12 300 3 1279 189 44 36 chr2 5383324 5383468 -247873115 + MER50 LTR ERV1 562 710 -24 227 287 0 69 chr2 5383881 5383968 -247872615 - MIR SINE MIR -109 99 19 2405 84 0 7 chr2 5384180 5384489 -247872094 + AluY SINE Alu 1 307 -4 219 204 20 0 chr2 5386498 5386547 -247870036 + (TA)n Simple_repeat Simple_repeat 2 51 0 309 183 54 0 chr2 5386618 5386711 -247869872 + (TA)n Simple_repeat Simple_repeat 2 99 0 197 236 36 36 chr2 5386872 5386927 -247869656 + MIR3 SINE MIR 126 180 -28 324 216 24 32 chr2 5388569 5388694 -247867889 + (TAGA)n Simple_repeat Simple_repeat 3 126 0 222 37 0 0 chr2 5389609 5389636 -247866947 + (TG)n Simple_repeat Simple_repeat 2 28 0 2439 80 3 3 chr2 5389872 5390183 -247866400 + AluY SINE Alu 1 311 0 193 215 89 51 chr2 5390290 5390369 -247866214 + MIR3 SINE MIR 106 187 -21 807 290 140 6 chr2 5390743 5391108 -247865475 + MLT1G1 LTR MaLR 86 499 -96 201 213 0 21 chr2 5391385 5391432 -247865151 + L2 LINE L2 3267 3312 -1 285 94 31 16 chr2 5392424 5392488 -247864095 + (TA)n Simple_repeat Simple_repeat 2 66 0 461 142 239 44 chr2 5392595 5392708 -247863875 + MLT1C LTR MaLR 2 136 -331 8950 182 35 9 chr2 5392709 5394115 -247862468 + L1MA3 LINE L1 21 1390 -6246 612 0 0 0 chr2 5394115 5394183 -247862400 + (GA)n Simple_repeat Simple_repeat 2 69 0 8950 182 35 9 chr2 5394183 5395595 -247860988 + L1MA3 LINE L1 1390 6893 -743 1096 203 8 38 chr2 5395598 5395864 -247860719 - AluJo SINE Alu -23 289 32 4628 119 80 10 chr2 5395864 5396640 -247859943 + L1MA3 LINE L1 6885 7714 -10 2256 99 0 7 chr2 5396672 5396976 -247859607 + AluSg1 SINE Alu 5 306 -3 1098 238 44 24 chr2 5396992 5397332 -247859251 + MLT1C LTR MaLR 121 467 0 348 320 26 48 chr2 5397354 5397585 -247858998 + MIR SINE MIR 13 238 -24 22 56 0 0 chr2 5398597 5398633 -247857950 + AT_rich Low_complexity Low_complexity 1 36 0 208 69 0 0 chr2 5400258 5400287 -247856296 - MIR SINE MIR -66 142 114 186 133 0 0 chr2 5401375 5401405 -247855178 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 21 36 0 0 chr2 5402269 5402297 -247854286 + AT_rich Low_complexity Low_complexity 1 28 0 2106 128 6 13 chr2 5402612 5402924 -247853659 - AluSg SINE Alu 0 310 1 464 264 22 55 chr2 5403286 5403468 -247853115 + MER69A DNA AcHobo 1 176 -1 25 0 0 0 chr2 5403669 5403694 -247852889 + AT_rich Low_complexity Low_complexity 1 25 0 2178 115 0 0 chr2 5404294 5404581 -247852002 - AluSg SINE Alu -23 287 1 1049 72 0 0 chr2 5404917 5405055 -247851528 + MLT2B1 LTR ERVL 1 138 -382 965 199 0 5 chr2 5405068 5405254 -247851329 + MLT2B2 LTR ERVL 329 513 -2 250 252 244 0 chr2 5406111 5406238 -247850345 + MIR SINE MIR 99 256 -6 243 271 14 14 chr2 5406285 5406355 -247850228 - MER5A DNA MER1_type -5 184 115 226 234 0 0 chr2 5406806 5406853 -247849730 + GA-rich Low_complexity Low_complexity 3 49 0 2700 107 0 3 chr2 5407604 5407969 -247848614 + THE1B LTR MaLR 1 364 0 4033 139 26 2 chr2 5408233 5408851 -247847732 + MER41B LTR ERV1 1 633 -2 237 268 223 27 chr2 5409370 5409482 -247847101 + MER34 LTR ERV1 8 141 -401 237 220 121 44 chr2 5409470 5409561 -247847022 + MER34 LTR ERV1 76 173 -369 * 976 211 80 35 chr2 5409550 5409851 -247846732 + MER39 LTR ERV1 391 565 0 26 0 0 0 chr2 5410452 5410478 -247846105 + AT_rich Low_complexity Low_complexity 1 26 0 414 85 0 0 chr2 5411377 5411436 -247845147 + (GGA)n Simple_repeat Simple_repeat 2 60 0 223 221 48 10 chr2 5411854 5411958 -247844625 + (TA)n Simple_repeat Simple_repeat 1 108 0 28 29 0 0 chr2 5414768 5414803 -247841780 + AT_rich Low_complexity Low_complexity 1 35 0 1772 132 0 137 chr2 5414979 5415344 -247841239 + MER1B DNA MER1_type 25 339 0 260 228 55 41 chr2 5415378 5415523 -247841060 + (ATGTG)n Simple_repeat Simple_repeat 2 148 0 208 208 6 82 chr2 5415558 5415741 -247840842 + (TG)n Simple_repeat Simple_repeat 1 169 0 * 321 208 77 30 chr2 5415640 5415808 -247840775 + (TAGTG)n Simple_repeat Simple_repeat 5 180 0 307 238 71 18 chr2 5415834 5416002 -247840581 + (TAGTG)n Simple_repeat Simple_repeat 2 178 0 2314 103 3 0 chr2 5418294 5418594 -247837989 - AluSp SINE Alu -12 301 1 346 238 266 21 chr2 5418820 5418963 -247837620 - MLT1J LTR MaLR -333 178 1 4620 306 76 33 chr2 5419891 5420367 -247836216 - L2 LINE L2 -623 2691 2237 2145 106 7 0 chr2 5420367 5420649 -247835934 - AluSc SINE Alu -25 284 1 4620 306 76 33 chr2 5420649 5421606 -247834977 - L2 LINE L2 -1077 2237 1323 1427 205 13 30 chr2 5421606 5421904 -247834679 - AluJb SINE Alu -19 293 1 4620 306 76 33 chr2 5421904 5422888 -247833695 - L2 LINE L2 -1991 1323 159 2298 114 0 0 chr2 5422888 5423187 -247833396 - AluSg SINE Alu -11 299 1 4620 306 76 33 chr2 5423187 5423261 -247833322 - L2 LINE L2 -3155 159 90 33 0 0 0 chr2 5423374 5423407 -247833176 + AT_rich Low_complexity Low_complexity 1 33 0 2506 74 0 3 chr2 5423407 5423719 -247832864 - AluY SINE Alu 0 311 1 2283 124 0 3 chr2 5423985 5424299 -247832284 + AluSq SINE Alu 1 313 0 411 347 55 24 chr2 5424302 5424682 -247831901 + L1M4 LINE L1 3115 3499 -2647 520 308 242 8 chr2 5424726 5425003 -247831580 - L2 LINE L2 -561 2753 2542 2090 191 46 20 chr2 5425003 5425458 -247831125 - MLT1C LTR MaLR 0 467 1 520 308 242 8 chr2 5425458 5425700 -247830883 - L2 LINE L2 -772 2542 2112 259 381 7 0 chr2 5425996 5426135 -247830448 + L2 LINE L2 3133 3272 0 224 29 86 0 chr2 5426799 5426834 -247829749 + T-rich Low_complexity Low_complexity 4 41 0 2318 106 0 0 chr2 5427504 5427797 -247828786 + AluSx SINE Alu 5 297 -15 257 209 11 22 chr2 5427799 5427890 -247828693 + (TA)n Simple_repeat Simple_repeat 1 90 0 1992 137 0 0 chr2 5428923 5429200 -247827383 + AluSx SINE Alu 1 277 -35 220 26 26 26 chr2 5429204 5429242 -247827341 + (CAAAA)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chr2 5431454 5431475 -247825108 + AT_rich Low_complexity Low_complexity 1 21 0 1871 152 10 3 chr2 5431475 5431764 -247824819 - AluSx SINE Alu -20 292 2 2174 108 3 13 chr2 5432231 5432538 -247824045 - AluY SINE Alu -7 304 1 591 236 99 6 chr2 5436170 5436352 -247820231 - MER3 DNA MER1_type -1 208 10 1872 137 4 0 chr2 5436643 5436913 -247819670 + AluSx SINE Alu 22 292 -20 187 313 0 0 chr2 5436947 5436995 -247819588 - L2 LINE L2 -16 3297 3250 419 228 123 49 chr2 5437016 5437178 -247819405 - MIR SINE MIR -19 243 70 1925 110 10 61 chr2 5437595 5437905 -247818678 - AluSx SINE Alu -13 299 6 278 0 0 51 chr2 5437905 5437944 -247818639 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1233 207 73 25 chr2 5437946 5438221 -247818362 - AluJb SINE Alu -24 288 1 1191 103 65 73 chr2 5438598 5438830 -247817753 + MER30 DNA MER1_type 1 230 0 2118 104 7 0 chr2 5439030 5439317 -247817266 - AluSx SINE Alu -23 289 1 181 339 28 0 chr2 5440386 5440495 -247816088 - MIR SINE MIR -56 206 95 1295 105 5 20 chr2 5440547 5440747 -247815836 + L1PA15 LINE L1 5962 6158 -7 2072 126 0 35 chr2 5441680 5441998 -247814585 - AluSx SINE Alu -5 307 1 231 315 169 23 chr2 5442002 5442351 -247814232 + L2 LINE L2 1989 2388 -926 183 42 0 0 chr2 5443145 5443169 -247813414 + (CATTC)n Simple_repeat Simple_repeat 1 24 0 250 292 14 0 chr2 5444979 5445051 -247811532 + tRNA-Ile-ATT tRNA tRNA 1 73 -4 23 0 0 0 chr2 5446208 5446231 -247810352 + AT_rich Low_complexity Low_complexity 1 23 0 203 122 24 24 chr2 5447001 5447042 -247809541 + A-rich Low_complexity Low_complexity 4 44 0 273 329 120 12 chr2 5447239 5447406 -247809177 + MIR SINE MIR 3 187 -75 784 187 45 90 chr2 5447472 5447740 -247808843 + MLT1A1 LTR MaLR 110 365 0 637 221 0 7 chr2 5447859 5447999 -247808584 + L1PB4 LINE L1 6018 6156 0 575 225 62 0 chr2 5448466 5448595 -247807988 + MLT1A2 LTR MaLR 4 140 -234 1927 155 52 22 chr2 5448595 5448957 -247807626 + THE1C LTR MaLR 1 373 -2 9346 143 24 36 chr2 5448959 5450557 -247806026 + THE1C-int LTR MaLR 3 1580 0 1649 191 55 12 chr2 5450557 5450902 -247805681 + THE1C LTR MaLR 1 360 -15 810 222 54 42 chr2 5450914 5451153 -247805430 + MLT1A2 LTR MaLR 133 374 0 189 171 0 0 chr2 5452117 5452152 -247804431 + (TA)n Simple_repeat Simple_repeat 2 36 0 225 273 23 0 chr2 5452154 5452242 -247804341 - L1MC4 LINE L1 -1339 6703 6614 232 254 0 17 chr2 5452242 5452301 -247804282 + (TATG)n Simple_repeat Simple_repeat 2 59 0 243 270 0 0 chr2 5452301 5452390 -247804193 + L1MC4 LINE L1 6614 6702 -1340 231 277 153 7 chr2 5452480 5452617 -247803966 - MER103 DNA DNA -8 158 2 306 319 111 21 chr2 5452760 5452904 -247803679 - MER5A DNA MER1_type -31 158 2 211 327 29 39 chr2 5453719 5453823 -247802760 - MIR3 SINE MIR -35 173 71 352 285 69 14 chr2 5455451 5455595 -247800988 - MER5A DNA MER1_type -11 178 27 480 152 36 27 chr2 5455732 5455844 -247800739 - L1MB4 LINE L1 -1 6179 6067 2154 104 30 0 chr2 5455896 5456194 -247800389 - AluSg1 SINE Alu -2 307 1 2411 211 20 10 chr2 5456194 5456697 -247799886 - L1MB4 LINE L1 -106 6074 5567 299 318 8 8 chr2 5457325 5457457 -247799126 + (TGG)n Simple_repeat Simple_repeat 3 134 0 263 226 78 35 chr2 5457968 5458083 -247798500 + Charlie8 DNA MER1_type 73 192 -2225 244 325 0 8 chr2 5458140 5458318 -247798265 + (CCA)n Simple_repeat Simple_repeat 1 176 0 372 315 6 22 chr2 5458399 5458580 -247798003 + (CACCAT)n Simple_repeat Simple_repeat 1 178 0 * 442 307 11 6 chr2 5458458 5458637 -247797946 + (CCA)n Simple_repeat Simple_repeat 1 180 0 268 346 13 0 chr2 5458599 5458755 -247797828 + (CACCAT)n Simple_repeat Simple_repeat 1 158 0 * 223 250 56 28 chr2 5459357 5459429 -247797154 + L2 LINE L2 3147 3220 -52 2494 59 0 0 chr2 5460344 5460647 -247795936 - AluY SINE Alu -8 303 1 211 189 0 0 chr2 5462049 5462086 -247794497 + (TG)n Simple_repeat Simple_repeat 2 38 0 2241 104 16 0 chr2 5462124 5462431 -247794152 - AluSq SINE Alu -1 312 1 2153 139 47 36 chr2 5463055 5463415 -247793168 - THE1B LTR MaLR 0 364 1 11988 106 13 8 chr2 5463415 5464987 -247791596 - THE1B-int LTR MaLR 0 1580 1 2207 126 47 49 chr2 5464987 5465352 -247791231 - THE1B LTR MaLR 0 364 1 212 253 13 0 chr2 5466962 5467037 -247789546 + (TA)n Simple_repeat Simple_repeat 1 76 0 2218 118 7 10 chr2 5467056 5467360 -247789223 - AluSx SINE Alu -9 303 1 22 0 0 0 chr2 5467611 5467633 -247788950 + AT_rich Low_complexity Low_complexity 1 22 0 403 171 19 0 chr2 5468425 5468530 -247788053 + (TG)n Simple_repeat Simple_repeat 2 108 0 218 205 53 41 chr2 5468585 5468756 -247787827 + (TG)n Simple_repeat Simple_repeat 1 173 0 289 117 33 0 chr2 5468800 5468860 -247787723 + (TG)n Simple_repeat Simple_repeat 2 63 0 309 266 182 13 chr2 5469443 5469597 -247786986 + L1ME3A LINE L1 5986 6165 -5 339 285 128 75 chr2 5469662 5469943 -247786640 + L1MB2 LINE L1 969 1264 -5585 180 341 71 0 chr2 5470667 5470752 -247785831 + L2 LINE L2 2710 2800 -514 228 214 0 0 chr2 5470766 5470822 -247785761 + (ATG)n Simple_repeat Simple_repeat 1 56 0 1915 158 0 0 chr2 5470877 5471168 -247785415 + AluSx SINE Alu 21 311 -1 357 223 204 32 chr2 5471172 5471329 -247785254 - MIR SINE MIR -63 199 16 202 304 152 27 chr2 5471730 5471842 -247784741 + L2 LINE L2 3187 3312 -1 2143 106 3 0 chr2 5475459 5475752 -247780831 + AluY SINE Alu 2 295 -16 760 245 70 84 chr2 5476950 5477359 -247779224 + MLT1I LTR MaLR 8 450 0 1814 138 7 24 chr2 5478550 5478887 -247777696 + AluSx SINE Alu 1 332 0 384 304 57 6 chr2 5478996 5479154 -247777429 - MIR SINE MIR -73 189 24 2199 104 0 36 chr2 5479334 5479642 -247776941 - AluSg SINE Alu -13 297 1 1427 237 113 7 chr2 5479683 5480118 -247776465 - L1ME2 LINE L1 -77 6087 5607 246 239 70 0 chr2 5480415 5480486 -247776097 - L1ME2 LINE L1 -673 5491 5416 1680 243 79 58 chr2 5480565 5480822 -247775761 - L1ME2 LINE L1 -742 5442 5192 2003 111 37 17 chr2 5480822 5481120 -247775463 - AluSx SINE Alu -8 304 1 1680 243 79 58 chr2 5481120 5481944 -247774639 - L1ME2 LINE L1 -992 5192 4321 11128 226 50 14 chr2 5481944 5482466 -247774117 + L1MB2 LINE L1 2557 3059 -3814 2204 120 0 0 chr2 5482466 5482765 -247773818 + AluSq SINE Alu 1 299 -14 11128 226 50 14 chr2 5482765 5485051 -247771532 + L1MB2 LINE L1 3059 5571 -1302 195 100 0 0 chr2 5485051 5485081 -247771502 + (CAGA)n Simple_repeat Simple_repeat 4 33 0 11128 226 50 14 chr2 5485081 5486162 -247770421 + L1MB2 LINE L1 5571 6612 -261 2536 254 80 38 chr2 5486165 5486776 -247769807 - L1ME2 LINE L1 -2413 3733 3149 181 0 33 33 chr2 5486776 5486806 -247769777 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2536 254 80 38 chr2 5486806 5487475 -247769108 - L1ME2 LINE L1 -2997 3149 2399 21 57 0 0 chr2 5487880 5487915 -247768668 + AT_rich Low_complexity Low_complexity 1 35 0 326 307 145 22 chr2 5488173 5488352 -247768231 + MIR3 SINE MIR 8 208 0 284 303 25 0 chr2 5488584 5488703 -247767880 - L1ME LINE L1 -304 5817 5696 2499 71 0 3 chr2 5489171 5489479 -247767104 + AluY SINE Alu 1 307 -4 502 275 67 42 chr2 5490020 5490260 -247766323 + MIR SINE MIR 4 249 -13 3480 187 108 28 chr2 5490837 5491962 -247764621 + L1MB7 LINE L1 4883 6103 -81 933 271 13 4 chr2 5492244 5492469 -247764114 + Charlie1 DNA MER1_type 1 227 -2534 636 234 0 0 chr2 5492463 5492604 -247763979 + Charlie1 DNA MER1_type 2620 2760 -1 * 198 300 0 71 chr2 5492827 5492897 -247763686 - L2 LINE L2 -55 3217 3153 187 372 44 22 chr2 5493108 5493245 -247763338 + L2 LINE L2 3132 3271 -1 462 153 0 90 chr2 5495913 5496024 -247760559 - MER53 DNA DNA 0 189 89 393 276 17 26 chr2 5496916 5497032 -247759551 + MIR SINE MIR 33 147 -61 21 57 0 0 chr2 5498439 5498474 -247758109 + AT_rich Low_complexity Low_complexity 1 35 0 258 105 0 0 chr2 5499483 5499521 -247757062 + (CA)n Simple_repeat Simple_repeat 1 38 0 243 0 0 0 chr2 5500364 5500391 -247756192 + (TG)n Simple_repeat Simple_repeat 1 27 0 245 281 37 49 chr2 5501586 5501668 -247754915 - MLT1K LTR MaLR -356 232 152 318 296 134 23 chr2 5502438 5502610 -247753973 - MIR SINE MIR -43 219 29 247 250 94 42 chr2 5503433 5503529 -247753054 - MIR SINE MIR -114 148 48 909 286 129 11 chr2 5503578 5503949 -247752634 + LTR16C LTR ERVL 69 483 -8 255 282 13 0 chr2 5504371 5504449 -247752134 - MER116 DNA Mariner 0 80 2 386 302 41 24 chr2 5504565 5504734 -247751849 + MIR SINE MIR 76 247 -15 195 356 82 22 chr2 5505219 5505254 -247751329 + MIR SINE MIR 49 80 -182 7009 152 43 13 chr2 5505254 5505502 -247751081 - Tigger3b DNA MER2_type -1797 1231 992 2031 134 0 0 chr2 5505502 5505959 -247750624 + AluSq SINE Alu 1 457 0 7009 152 43 13 chr2 5505959 5506905 -247749678 - Tigger3b DNA MER2_type -2036 992 1 195 356 82 22 chr2 5506905 5507004 -247749579 + MIR SINE MIR 80 191 -71 285 371 68 34 chr2 5507439 5507760 -247748823 + L2 LINE L2 2311 2642 -672 417 326 27 27 chr2 5507761 5507948 -247748635 - LTR16C LTR ERVL 0 491 305 1936 189 47 14 chr2 5508187 5508547 -247748036 - MSTD LTR MaLR 0 396 25 600 128 262 28 chr2 5508897 5509038 -247747545 - MER3 DNA MER1_type -6 203 30 479 279 38 25 chr2 5509084 5509242 -247747341 + MLT1H LTR MaLR 10 169 -380 485 274 0 16 chr2 5510155 5510279 -247746304 - MSTD LTR MaLR -78 318 197 217 239 0 0 chr2 5510353 5510399 -247746184 + MIR SINE MIR 89 134 -128 308 43 0 43 chr2 5511111 5511158 -247745425 + (TAA)n Simple_repeat Simple_repeat 2 46 0 429 293 99 42 chr2 5511574 5511765 -247744818 + MIR3 SINE MIR 1 202 -6 382 281 44 0 chr2 5512161 5512296 -247744287 - MIR3 SINE MIR -1 207 67 238 279 0 47 chr2 5512729 5512815 -247743768 + GA-rich Low_complexity Low_complexity 5 86 0 2384 64 0 0 chr2 5513901 5514243 -247742340 + AluY SINE Alu 1 342 0 256 272 87 11 chr2 5514386 5514478 -247742105 + MIR SINE MIR 91 189 -73 23 0 0 0 chr2 5515587 5515610 -247740973 + AT_rich Low_complexity Low_complexity 1 23 0 371 330 44 53 chr2 5515714 5516056 -247740527 - L2 LINE L2 -801 2513 2175 1337 219 34 70 chr2 5516174 5516473 -247740110 - MLT1A2 LTR MaLR 0 374 91 2123 182 79 89 chr2 5516473 5517033 -247739550 - MLT2B3 LTR ERVL 0 554 1 1337 219 34 70 chr2 5517033 5517121 -247739462 - MLT1A2 LTR MaLR -283 91 1 1699 219 102 2 chr2 5517627 5518047 -247738536 + MLT1C LTR MaLR 1 462 -5 1553 212 0 7 chr2 5518578 5518870 -247737713 - AluJb SINE Alu -22 290 1 531 218 69 75 chr2 5519048 5519091 -247737492 - MIR SINE MIR -8 254 212 264 77 0 0 chr2 5519091 5519130 -247737453 + (CA)n Simple_repeat Simple_repeat 2 40 0 531 218 69 75 chr2 5519130 5519188 -247737395 - MIR SINE MIR -50 212 155 2849 109 3 3 chr2 5519188 5519563 -247737020 + THE1C LTR MaLR 1 375 0 531 218 69 75 chr2 5519563 5519648 -247736935 - MIR SINE MIR -107 155 68 214 319 90 54 chr2 5519707 5519873 -247736710 - L2 LINE L2 -919 2395 2224 635 318 60 22 chr2 5520100 5520937 -247735646 + L1ME3 LINE L1 5036 5932 -230 2198 213 33 27 chr2 5521337 5521374 -247735209 - MLT2B1 LTR ERVL 0 520 485 243 0 0 0 chr2 5521374 5521401 -247735182 + (TG)n Simple_repeat Simple_repeat 2 28 0 2198 213 33 27 chr2 5521401 5521880 -247734703 - MLT2B1 LTR ERVL -35 485 1 356 290 0 0 chr2 5522364 5522464 -247734119 - MER91B DNA MER1_type -40 150 51 27 0 0 0 chr2 5524380 5524407 -247732176 + AT_rich Low_complexity Low_complexity 1 27 0 761 243 0 7 chr2 5524793 5524941 -247731642 + FRAM SINE Alu 4 150 -26 2407 82 0 13 chr2 5524943 5525247 -247731336 - AluSc SINE Alu -9 300 1 39 38 0 0 chr2 5525247 5525300 -247731283 + AT_rich Low_complexity Low_complexity 1 53 0 458 277 3 2 chr2 5526711 5526834 -247729749 - MLT1E2 LTR MaLR -202 424 262 894 289 53 73 chr2 5526883 5527256 -247729327 + HAL1 LINE L1 1054 1406 -1101 2277 111 0 16 chr2 5527256 5527571 -247729012 + AluSg SINE Alu 1 310 0 894 289 53 73 chr2 5527571 5527963 -247728620 + HAL1 LINE L1 1406 1804 -703 480 151 2 8 chr2 5528790 5528878 -247727705 + L1PB1 LINE L1 5698 5782 -369 419 147 39 0 chr2 5528897 5528999 -247727584 + (TA)n Simple_repeat Simple_repeat 1 106 0 2981 65 3 13 chr2 5528999 5529371 -247727212 + L1PB1 LINE L1 5782 6149 -2 2097 116 0 3 chr2 5529745 5530063 -247726520 - AluSq SINE Alu 0 317 1 2330 70 3 7 chr2 5530321 5530620 -247725963 + AluY SINE Alu 1 298 -13 2179 128 3 0 chr2 5580744 5581048 -247675535 + AluSx SINE Alu 1 305 -7 403 349 17 6 chr2 5581190 5581362 -247675221 + L2 LINE L2 2606 2779 -535 1932 135 0 0 chr2 5581419 5581686 -247674897 - AluSx SINE Alu -45 267 1 185 349 0 12 chr2 5582757 5582840 -247673743 - MIR SINE MIR -44 218 137 287 279 146 24 chr2 5582964 5583129 -247673454 + L1ME LINE L1 5420 5604 -560 2011 133 13 3 chr2 5583641 5583942 -247672641 - AluSp SINE Alu -5 308 5 995 209 33 113 chr2 5584226 5584623 -247671960 - MLT1A1 LTR MaLR 0 365 1 220 298 0 0 chr2 5584642 5584699 -247671884 - L3 LINE CR1 -1 1576 1520 289 330 30 88 chr2 5584828 5585125 -247671458 - L2 LINE L2 0 3272 2993 401 294 44 7 chr2 5585336 5585472 -247671111 + MIR3 SINE MIR 6 146 -62 412 264 65 75 chr2 5586152 5586353 -247670230 - MIR SINE MIR -34 228 30 360 43 0 0 chr2 5586992 5587038 -247669545 + (CA)n Simple_repeat Simple_repeat 1 46 0 354 287 25 0 chr2 5587069 5587191 -247669392 + MER112 DNA MER1_type 136 260 0 260 146 39 59 chr2 5587425 5587819 -247668764 + (TA)n Simple_repeat Simple_repeat 1 386 0 440 293 67 34 chr2 5587909 5588117 -247668466 + L2 LINE L2 3099 3313 0 184 50 100 0 chr2 5589263 5589303 -247667280 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 347 226 89 24 chr2 5590025 5590193 -247666390 - Looper DNA T2_type -10 1548 1370 * 557 264 6 0 chr2 5590186 5590349 -247666234 - Looper DNA T2_type -598 960 797 521 255 50 0 chr2 5590421 5590582 -247666001 - MER3 DNA MER1_type -20 189 21 550 195 8 0 chr2 5590592 5590710 -247665873 - L1MB1 LINE L1 -340 5828 5710 1762 138 138 9 chr2 5590751 5591100 -247665483 + MSTA LTR MaLR 2 395 -33 1929 161 0 25 chr2 5591102 5591418 -247665165 - AluJo SINE Alu -4 308 1 556 143 10 0 chr2 5591435 5591533 -247665050 - L1MA9 LINE L1 -325 5987 5889 855 299 92 9 chr2 5591542 5591870 -247664713 + LTR40a LTR ERVL 164 518 -1 1499 214 70 34 chr2 5591880 5592379 -247664204 - Looper DNA T2_type -989 569 53 1031 228 14 0 chr2 5593212 5593423 -247663160 - MER58A DNA MER1_type -9 215 2 2403 201 8 10 chr2 5594638 5595161 -247661422 - L1MB7 LINE L1 0 6184 5663 266 286 162 12 chr2 5595401 5595547 -247661036 + MIR SINE MIR 12 176 -86 479 222 43 43 chr2 5596074 5596236 -247660347 - MER20 DNA MER1_type -53 166 5 1264 291 106 39 chr2 5596250 5597276 -247659307 - L1MEc LINE L1 -4342 2054 921 3680 105 2 0 chr2 5597276 5597789 -247658794 - MER75 DNA T2_type 0 514 1 1264 291 106 39 chr2 5597789 5598066 -247658517 - L1MEc LINE L1 -5475 921 664 201 337 20 31 chr2 5598121 5598219 -247658364 - MER5B DNA MER1_type -77 101 5 1906 150 7 7 chr2 5598284 5598578 -247658005 + AluSx SINE Alu 1 294 -18 226 204 0 0 chr2 5598974 5599018 -247657565 - MER58 DNA MER1_type 0 2420 2377 326 297 64 18 chr2 5599018 5599237 -247657346 - L1MEc LINE L1 -6117 279 51 2003 167 6 6 chr2 5600037 5600373 -247656210 - MER1B DNA MER1_type -1 336 1 210 327 139 0 chr2 5600428 5600529 -247656054 - L2 LINE L2 -8 3264 3150 273 282 13 0 chr2 5600952 5601030 -247655553 + L2 LINE L2 3193 3271 -1 210 71 0 0 chr2 5601667 5601695 -247654888 + (T)n Simple_repeat Simple_repeat 1 28 0 695 255 145 33 chr2 5602470 5602925 -247653658 - HAL1 LINE L1 -125 2382 1877 578 240 125 72 chr2 5602978 5603282 -247653301 - HAL1 LINE L1 -714 1793 1474 1417 241 27 22 chr2 5604491 5604860 -247651723 + MLT1A2 LTR MaLR 1 371 -3 306 381 23 11 chr2 5607060 5607236 -247649347 + MIR3 SINE MIR 12 189 -19 275 271 42 25 chr2 5608856 5608974 -247647609 + MIR SINE MIR 96 215 -47 780 243 132 70 chr2 5609881 5610268 -247646315 - MLT2D LTR ERVL -2 412 2 1630 179 0 25 chr2 5610313 5610598 -247645985 + AluJo SINE Alu 35 312 0 447 297 92 41 chr2 5611047 5611189 -247645394 - MIR SINE MIR -23 239 83 2150 160 78 10 chr2 5611189 5611589 -247644994 - MSTA LTR MaLR 0 428 2 447 297 92 41 chr2 5611589 5611641 -247644942 - MIR SINE MIR -179 83 35 285 314 121 24 chr2 5612026 5612233 -247644350 + MLT1K LTR MaLR 326 552 -36 205 148 19 19 chr2 5612771 5612825 -247643758 + (CATATA)n Simple_repeat Simple_repeat 6 59 0 255 40 40 20 chr2 5613501 5613551 -247643032 + (TA)n Simple_repeat Simple_repeat 2 52 0 1603 160 8 8 chr2 5614347 5614610 -247641973 + AluSx SINE Alu 48 310 -2 278 93 56 37 chr2 5615197 5615305 -247641278 + (TA)n Simple_repeat Simple_repeat 2 111 0 2162 148 0 0 chr2 5615966 5616271 -247640312 - AluSx SINE Alu -7 305 1 1833 133 35 0 chr2 5616464 5616770 -247639813 - AluSx SINE Alu 0 333 19 442 320 131 10 chr2 5617547 5617944 -247638639 - L2 LINE L2 -17 3296 2852 207 369 46 31 chr2 5618189 5618319 -247638264 - L2 LINE L2 0 3272 3141 2127 185 49 21 chr2 5618589 5619017 -247637566 + MLT1C LTR MaLR 28 467 0 283 314 163 33 chr2 5620083 5620414 -247636169 - MLT1I LTR MaLR -35 374 1 2288 108 3 3 chr2 5620471 5620778 -247635805 + AluSp SINE Alu 1 307 -6 193 313 50 0 chr2 5621728 5621808 -247634775 + MIR SINE MIR 46 129 -133 370 240 164 27 chr2 5622017 5622163 -247634420 + L1MC5 LINE L1 7746 7911 -50 235 330 139 0 chr2 5622660 5622775 -247633808 - MIR3 SINE MIR -63 145 15 285 316 0 21 chr2 5623332 5623427 -247633156 + L2 LINE L2 3175 3267 -5 279 161 0 0 chr2 5623583 5623639 -247632944 + (TG)n Simple_repeat Simple_repeat 1 56 0 609 263 60 23 chr2 5623749 5623966 -247632617 + MIR SINE MIR 13 237 -25 1592 157 39 14 chr2 5624054 5624334 -247632249 - AluJb SINE Alu -25 287 1 250 311 41 8 chr2 5625725 5625847 -247630736 - L1ME4a LINE L1 -6 6115 5990 1071 93 17 29 chr2 5625914 5626086 -247630497 - L1PA13 LINE L1 -1 6162 5993 786 256 40 4 chr2 5626124 5626351 -247630232 - MIR SINE MIR -21 241 7 23 33 0 0 chr2 5626755 5626785 -247629798 + AT_rich Low_complexity Low_complexity 1 30 0 279 287 172 0 chr2 5626890 5627012 -247629571 - L1MC4 LINE L1 -375 7667 7525 251 204 37 0 chr2 5627848 5627902 -247628681 - MIR SINE MIR -192 70 15 821 173 84 35 chr2 5629849 5630075 -247626508 + L1MB7 LINE L1 5947 6183 -1 2114 119 3 22 chr2 5630214 5630533 -247626050 - AluSp SINE Alu 0 313 1 7102 53 6 11 chr2 5631571 5633001 -247623582 + L1PA7 LINE L1 4727 6151 -3 2002 208 57 5 chr2 5633014 5633456 -247623127 + MLT1C LTR MaLR 3 467 0 244 48 48 0 chr2 5634665 5634707 -247621876 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 288 53 0 0 chr2 5635058 5635096 -247621487 + (TG)n Simple_repeat Simple_repeat 2 39 0 2020 140 10 13 chr2 5637364 5637671 -247618912 - AluSx SINE Alu -6 306 1 379 259 54 22 chr2 5639834 5640019 -247616564 + LTR16B LTR ERVL 187 377 -87 201 178 0 0 chr2 5642298 5642343 -247614240 - MER5A DNA MER1_type -22 167 123 1000 36 15 15 chr2 5642626 5642763 -247613820 + (GAAA)n Simple_repeat Simple_repeat 2 138 0 2849 13 0 0 chr2 5643476 5643784 -247612799 - AluYa5 SINE Alu -3 308 1 208 199 122 5 chr2 5644245 5644313 -247612270 + MIR SINE MIR 49 123 -85 2185 289 77 36 chr2 5645846 5647049 -247609534 + L2 LINE L2 1157 2408 -906 431 324 78 15 chr2 5647507 5647967 -247608616 + L2 LINE L2 2820 3308 -5 308 342 98 5 chr2 5648958 5649142 -247607441 + MIR SINE MIR 2 202 -60 193 306 74 46 chr2 5649330 5649438 -247607145 - L2 LINE L2 0 3272 3162 191 297 63 9 chr2 5649498 5649609 -247606974 - L2 LINE L2 -211 3061 2945 1913 178 108 11 chr2 5649660 5650093 -247606490 - L1MB3 LINE L1 -1 6182 5708 472 260 0 8 chr2 5650133 5650256 -247606327 + L2 LINE L2 3187 3308 -5 228 300 42 50 chr2 5650274 5650394 -247606189 - MIR SINE MIR -73 189 71 193 330 34 0 chr2 5650501 5650589 -247605994 + MIR SINE MIR 64 154 -108 190 291 23 11 chr2 5650790 5650877 -247605706 + MIR SINE MIR 62 148 -63 4251 152 26 1 chr2 5651591 5652308 -247604275 - L1PB4 LINE L1 -8 6148 5414 426 293 112 21 chr2 5653774 5653962 -247602621 - MIR SINE MIR -30 232 28 205 250 0 0 chr2 5654069 5654113 -247602470 - L2 LINE L2 -556 2758 2715 221 186 17 68 chr2 5654795 5654854 -247601729 - L2 LINE L2 -14 3258 3203 296 286 105 9 chr2 5654972 5655077 -247601506 + MIR SINE MIR 34 148 -114 210 284 82 75 chr2 5656914 5657048 -247599535 + MIR SINE MIR 48 182 -80 555 281 44 78 chr2 5657109 5657257 -247599326 - L2 LINE L2 -4 3309 3157 2078 115 14 0 chr2 5657257 5657543 -247599040 - AluSq SINE Alu -18 295 6 555 281 44 78 chr2 5657543 5657714 -247598869 - L2 LINE L2 -156 3157 3001 327 263 182 0 chr2 5659208 5659307 -247597276 + L2 LINE L2 3142 3258 -14 21 36 0 0 chr2 5659791 5659819 -247596764 + AT_rich Low_complexity Low_complexity 1 28 0 383 293 84 22 chr2 5659914 5660075 -247596508 + MIR3 SINE MIR 20 193 -15 1741 172 10 3 chr2 5660737 5661040 -247595543 - AluJb SINE Alu -5 307 3 2751 23 3 0 chr2 5661168 5661477 -247595106 - AluYa5 SINE Alu -1 310 1 1869 233 40 12 chr2 5661974 5662477 -247594106 + MER97a DNA MER1_type? 369 885 -9 238 299 122 20 chr2 5662801 5662948 -247593635 + MIR SINE MIR 74 235 -27 269 100 20 0 chr2 5663055 5663105 -247593478 + (TC)n Simple_repeat Simple_repeat 1 51 0 211 319 0 0 chr2 5663113 5663182 -247593401 + (CATA)n Simple_repeat Simple_repeat 3 71 0 261 153 82 0 chr2 5664240 5664296 -247592287 - MLT2B3 LTR ERVL 0 554 394 209 184 0 0 chr2 5664296 5664334 -247592249 + (CAGA)n Simple_repeat Simple_repeat 4 41 0 736 144 17 22 chr2 5664334 5664514 -247592069 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 2473 153 113 17 chr2 5664550 5665021 -247591562 - MLT2B3 LTR ERVL -38 516 1 299 272 72 32 chr2 5667758 5667883 -247588700 - L2 LINE L2 -1 3271 3142 341 327 48 48 chr2 5669151 5669402 -247587181 - L3 LINE CR1 -72 1505 1255 243 313 90 8 chr2 5669837 5669971 -247586612 - MIR SINE MIR -8 254 110 638 227 39 0 chr2 5671977 5672131 -247584452 + L1MD1 LINE L1 6083 6242 0 25 0 0 0 chr2 5673228 5673253 -247583330 + AT_rich Low_complexity Low_complexity 1 25 0 218 167 24 0 chr2 5673308 5673350 -247583233 - MIR SINE MIR -112 150 108 201 238 129 20 chr2 5673554 5673655 -247582928 - MIR SINE MIR -77 131 20 304 323 21 21 chr2 5673720 5673816 -247582767 + MIR SINE MIR 21 116 -92 24 0 0 0 chr2 5674000 5674024 -247582559 + AT_rich Low_complexity Low_complexity 1 24 0 3445 158 10 22 chr2 5674049 5674216 -247582367 - L1MA5 LINE L1 0 6300 6132 949 175 0 19 chr2 5674216 5674376 -247582207 + FRAM SINE Alu 1 157 -9 3445 158 10 22 chr2 5674376 5674833 -247581750 - L1MA5 LINE L1 -168 6132 5684 2338 197 3 37 chr2 5674833 5675378 -247581205 + L1MA5 LINE L1 5159 5664 -636 606 240 67 0 chr2 5675411 5675561 -247581022 - MER5A DNA MER1_type -29 160 1 384 88 0 0 chr2 5676596 5676653 -247579930 + (CA)n Simple_repeat Simple_repeat 1 57 0 352 284 0 0 chr2 5677718 5677799 -247578784 - L2 LINE L2 0 3313 3233 264 322 96 9 chr2 5678081 5678196 -247578387 + MIR SINE MIR 20 144 -118 313 287 111 28 chr2 5678432 5678648 -247577935 - HsTC2 DNA Tc2 -1020 878 645 2373 87 7 0 chr2 5678815 5679113 -247577470 + AluSc SINE Alu 2 301 -8 21 36 0 0 chr2 5679234 5679262 -247577321 + AT_rich Low_complexity Low_complexity 1 28 0 213 235 0 29 chr2 5679849 5679917 -247576666 + (TATATG)n Simple_repeat Simple_repeat 4 69 0 242 293 49 0 chr2 5680197 5680279 -247576304 - HsTC2 DNA Tc2 -1329 569 484 * 264 247 13 13 chr2 5680272 5680349 -247576234 - HsTC2 DNA Tc2 -1597 301 225 1976 50 138 4 chr2 5680349 5680609 -247575974 - AluY SINE Alu -6 295 1 22 0 0 0 chr2 5681505 5681527 -247575056 + AT_rich Low_complexity Low_complexity 1 22 0 5015 181 17 13 chr2 5681536 5681916 -247574667 + Tigger3b DNA MER2_type 1 378 -2650 1916 117 50 7 chr2 5681916 5682223 -247574360 - AluSx SINE Alu 0 312 1 5015 181 17 13 chr2 5682223 5682910 -247573673 + Tigger3b DNA MER2_type 378 1231 0 1770 257 82 12 chr2 5683203 5683811 -247572772 - L1MD3 LINE L1 -2 7980 7150 1576 186 133 9 chr2 5683858 5684203 -247572380 - MLT1B LTR MaLR 0 390 3 201 171 24 0 chr2 5685101 5685142 -247571441 + (TG)n Simple_repeat Simple_repeat 2 43 0 311 279 91 61 chr2 5685650 5685847 -247570736 - L2 LINE L2 -4 3309 3107 785 225 108 95 chr2 5686340 5686683 -247569900 - MLT1H LTR MaLR -5 544 148 2082 116 0 26 chr2 5686683 5686985 -247569598 + AluSc SINE Alu 1 294 -15 785 225 108 95 chr2 5686985 5687121 -247569462 - MLT1H LTR MaLR -401 148 15 552 246 75 73 chr2 5687700 5688111 -247568472 + L1MEd LINE L1 823 1234 -4885 310 333 91 29 chr2 5688124 5688367 -247568216 + L1MEd LINE L1 1233 1490 -4639 2161 144 33 33 chr2 5688508 5688870 -247567713 - THE1B LTR MaLR 0 364 3 302 293 78 42 chr2 5690313 5690480 -247566103 + MIR SINE MIR 71 243 -19 285 294 37 37 chr2 5690514 5690623 -247565960 + L3 LINE CR1 1378 1486 -91 186 313 0 0 chr2 5690626 5690674 -247565909 + L2 LINE L2 3212 3259 -13 239 203 31 16 chr2 5690986 5691050 -247565533 - Charlie8 DNA MER1_type -2221 196 132 279 323 39 47 chr2 5692032 5692159 -247564424 + MIR SINE MIR 18 143 -119 341 172 0 0 chr2 5692785 5692843 -247563740 - L1PA16 LINE L1 -200 5966 5909 22 0 0 0 chr2 5693837 5693859 -247562724 + AT_rich Low_complexity Low_complexity 1 22 0 1494 162 4 4 chr2 5693873 5694102 -247562481 - AluSx SINE Alu -31 281 53 401 279 55 64 chr2 5694467 5694686 -247561897 - L2 LINE L2 -5 3308 3092 4683 109 8 5 chr2 5694985 5695624 -247560959 - L1PA10 LINE L1 -11 6157 5517 221 408 17 11 chr2 5696086 5696265 -247560318 + MIR SINE MIR 27 206 -56 212 348 0 0 chr2 5696382 5696451 -247560132 + L2 LINE L2 3204 3272 0 949 234 161 57 chr2 5696936 5697602 -247558981 - HAL1 LINE L1 -83 2424 1690 1039 258 119 34 chr2 5697692 5697961 -247558622 - HAL1 LINE L1 -647 1860 1537 2019 129 7 13 chr2 5697961 5698320 -247558263 + AluSx SINE Alu 1 312 0 1039 258 119 34 chr2 5698320 5698496 -247558087 - HAL1 LINE L1 -970 1537 1377 660 256 76 19 chr2 5698907 5699169 -247557414 - HAL1 LINE L1 -1119 1388 1112 609 314 181 13 chr2 5699195 5699666 -247556917 - HAL1 LINE L1 -1540 967 418 1182 238 32 18 chr2 5699707 5699989 -247556594 - HAL1 LINE L1 -2208 299 14 182 322 132 40 chr2 5700157 5700331 -247556252 - MIR SINE MIR 0 262 73 291 334 62 15 chr2 5700889 5701053 -247555530 + MIR SINE MIR 5 171 -37 32 0 0 0 chr2 5701100 5701132 -247555451 + AT_rich Low_complexity Low_complexity 1 32 0 532 330 84 44 chr2 5701286 5701703 -247554880 + L2 LINE L2 2204 2644 -670 2718 116 36 3 chr2 5701703 5702066 -247554517 + THE1C LTR MaLR 1 375 0 532 330 84 44 chr2 5702066 5702126 -247554457 + L2 LINE L2 2644 2700 -614 309 297 89 0 chr2 5702487 5702588 -247553995 + L2 LINE L2 3204 3313 0 203 224 20 0 chr2 5702663 5702712 -247553871 + (TAAA)n Simple_repeat Simple_repeat 1 50 0 198 0 0 0 chr2 5706325 5706347 -247550236 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 1001 236 72 43 chr2 5707044 5707392 -247549191 - MLT1C LTR MaLR -104 363 6 2322 104 0 7 chr2 5707446 5707755 -247548828 + AluSq SINE Alu 1 307 -6 920 274 131 18 chr2 5708802 5709305 -247547278 + L1ME4a LINE L1 5557 6116 -5 1849 151 0 7 chr2 5709956 5710241 -247546342 + AluSx SINE Alu 21 303 -9 22 35 0 0 chr2 5710306 5710335 -247546248 + AT_rich Low_complexity Low_complexity 1 29 0 1544 109 60 0 chr2 5710684 5710951 -247545632 + AluSc SINE Alu 1 283 -26 305 89 0 0 chr2 5711068 5711113 -247545470 + AluSc SINE Alu 253 297 -2 2631 51 0 0 chr2 5711380 5711691 -247544892 - AluYa5 SINE Alu 0 311 1 228 347 0 21 chr2 5712703 5712798 -247543785 + MIR SINE MIR 24 116 -92 2380 85 3 0 chr2 5712881 5713188 -247543395 - AluY SINE Alu -3 308 1 2092 104 42 3 chr2 5714187 5714475 -247542108 + AluSx SINE Alu 2 300 -12 388 293 129 30 chr2 5714839 5715071 -247541512 + MLT1J2 LTR MaLR 48 302 -148 213 21 21 83 chr2 5715359 5715407 -247541176 + (TTTTTG)n Simple_repeat Simple_repeat 4 48 0 446 235 18 12 chr2 5715685 5715851 -247540732 + GA-rich Low_complexity Low_complexity 1 167 0 291 343 71 7 chr2 5717051 5717191 -247539392 + MIR SINE MIR 20 168 -94 181 362 48 38 chr2 5717298 5717403 -247539180 - L2 LINE L2 -22 3250 3145 2301 52 38 17 chr2 5717610 5717900 -247538683 + AluY SINE Alu 1 296 -15 276 322 86 53 chr2 5718450 5718602 -247537981 - L2 LINE L2 -4 3268 3112 232 360 35 9 chr2 5719421 5719535 -247537048 - MIR SINE MIR -76 132 16 260 341 31 23 chr2 5721129 5721258 -247535325 - MER5B DNA MER1_type -44 134 5 2000 137 3 0 chr2 5721323 5721616 -247534967 + AluSx SINE Alu 1 294 -18 248 111 0 0 chr2 5723998 5724034 -247532549 - U2 snRNA snRNA -152 36 1 328 177 51 0 chr2 5724050 5724129 -247532454 - MIR SINE MIR -115 147 65 2289 75 0 4 chr2 5724133 5724481 -247532102 - AluY SINE Alu 0 347 1 291 54 0 0 chr2 5725255 5725292 -247531291 + (TATG)n Simple_repeat Simple_repeat 2 38 0 256 131 16 16 chr2 5725691 5725752 -247530831 + (TCCA)n Simple_repeat Simple_repeat 1 61 0 793 337 38 27 chr2 5725765 5726335 -247530248 - L2 LINE L2 0 3313 2737 776 226 27 27 chr2 5726358 5726544 -247530039 + MLT2B1 LTR ERVL 1 186 -334 1912 197 33 3 chr2 5726719 5727085 -247529498 + MLT2B1 LTR ERVL 144 520 0 404 351 71 14 chr2 5727102 5727313 -247529270 - L2 LINE L2 -605 2709 2487 22 0 0 0 chr2 5728053 5728075 -247528508 + AT_rich Low_complexity Low_complexity 1 22 0 887 192 0 11 chr2 5728082 5728318 -247528265 - AluJb SINE Alu -17 295 1 276 30 0 0 chr2 5728336 5728369 -247528214 + (A)n Simple_repeat Simple_repeat 1 33 0 2152 297 158 22 chr2 5728708 5729900 -247526683 + L2 LINE L2 1933 3277 -36 2094 132 0 0 chr2 5730093 5730388 -247526195 - AluSx SINE Alu -17 295 1 21 57 0 0 chr2 5730491 5730526 -247526057 + AT_rich Low_complexity Low_complexity 1 35 0 22799 104 3 2 chr2 5730624 5734552 -247522031 - L1PA7 LINE L1 -4 6465 2541 1620 127 17 0 chr2 5734560 5734797 -247521786 - L1PA7 LINE L1 -6213 248 8 551 282 23 0 chr2 5735135 5735355 -247521228 - L1MEc LINE L1 -5466 930 706 467 366 51 15 chr2 5735371 5735702 -247520881 - L1MEc LINE L1 -5941 455 113 1034 204 194 142 chr2 5735710 5736490 -247520093 + MER52A LTR ERV1 667 1486 -269 433 252 16 16 chr2 5736484 5736611 -247519972 + MER52A LTR ERV1 1599 1725 -30 * 236 288 0 0 chr2 5736835 5736908 -247519675 - MER5A DNA MER1_type -113 76 4 231 351 14 0 chr2 5737733 5737807 -247518776 - L2 LINE L2 -206 3066 2992 362 343 30 18 chr2 5737821 5737987 -247518596 + MIR SINE MIR 42 209 -53 1499 227 41 78 chr2 5737999 5738484 -247518099 + MLT1C LTR MaLR 1 467 0 292 283 186 0 chr2 5739781 5739894 -247516689 - L2 LINE L2 -1 3312 3179 455 251 123 18 chr2 5740250 5740413 -247516170 + MIR SINE MIR 2 181 -81 246 358 13 20 chr2 5741130 5741281 -247515302 - MIR3 SINE MIR -4 204 55 228 304 33 22 chr2 5741913 5742005 -247514578 - MIR3 SINE MIR -3 205 113 194 294 0 0 chr2 5743253 5743304 -247513279 - MIR SINE MIR -65 143 93 195 352 62 52 chr2 5744447 5744640 -247511943 + MIR SINE MIR 20 214 -48 227 240 132 107 chr2 5744743 5744864 -247511719 + MIR SINE MIR 61 184 -78 393 239 97 13 chr2 5744901 5745056 -247511527 - MIR SINE MIR -14 248 81 1044 232 30 4 chr2 5746853 5747086 -247509497 + MLT1B LTR MaLR 152 390 0 2540 133 11 3 chr2 5747237 5747598 -247508985 - THE1B LTR MaLR 0 364 1 1254 272 32 3 chr2 5747634 5748005 -247508578 + L1ME2 LINE L1 3938 4319 -1827 888 262 40 15 chr2 5748057 5748385 -247508198 + L1ME2 LINE L1 4409 4744 -1402 1091 280 35 8 chr2 5748385 5748989 -247507594 + L1ME2 LINE L1 4996 5616 -550 1096 217 122 9 chr2 5749001 5749507 -247507076 - MLT1E1 LTR MaLR -14 640 1 1771 235 43 50 chr2 5749514 5750074 -247506509 + L1ME2 LINE L1 5617 6332 -2 223 344 86 6 chr2 5753914 5754077 -247502506 - L3 LINE CR1 -570 1007 832 313 255 0 85 chr2 5754114 5754220 -247502363 - MIR SINE MIR -7 255 159 328 292 101 17 chr2 5754617 5754795 -247501788 + MIR SINE MIR 8 200 -62 195 282 14 28 chr2 5755197 5755268 -247501315 + MIR SINE MIR 69 138 -124 6177 166 59 20 chr2 5756467 5757206 -247499377 + Tigger3b DNA MER2_type 1 805 -2223 1552 190 35 7 chr2 5757206 5757496 -247499087 + AluJb SINE Alu 1 298 -14 6177 166 59 20 chr2 5757496 5757940 -247498643 + Tigger3b DNA MER2_type 805 1230 -1 2544 38 0 0 chr2 5758333 5758623 -247497960 - AluY SINE Alu -21 290 1 323 311 0 0 chr2 5758671 5758761 -247497822 + L1MC4 LINE L1 6614 6703 -1339 237 183 50 0 chr2 5758778 5758838 -247497745 + L1MCa LINE L1 2006 2068 -4358 * 258 256 47 0 chr2 5758805 5758891 -247497692 - L1MC4 LINE L1 -1339 6703 6614 207 100 0 0 chr2 5758896 5758926 -247497657 + (TA)n Simple_repeat Simple_repeat 1 30 0 237 174 0 0 chr2 5758931 5758977 -247497606 - LTR66 LTR ERVL -171 439 394 234 191 0 0 chr2 5758939 5758986 -247497597 + LTR66 LTR ERVL 394 440 -170 * 236 131 16 66 chr2 5759010 5759071 -247497512 - LTR66 LTR ERVL -171 439 382 3336 123 5 9 chr2 5759316 5759884 -247496699 - L1P LINE L1 -3190 2956 2391 1366 82 0 15 chr2 5761176 5761371 -247495212 - AluY SINE Alu -13 298 107 305 224 112 37 chr2 5761502 5761609 -247494974 - MLT1G1 LTR MaLR -243 352 238 2077 147 51 12 chr2 5762137 5762591 -247493992 - L1MC1 LINE L1 -54 6290 5813 1103 303 26 28 chr2 5763676 5764098 -247492485 - L2 LINE L2 0 3313 2893 1982 236 64 75 chr2 5765242 5765932 -247490651 + L1M4 LINE L1 168 849 -5693 1613 260 83 32 chr2 5765938 5766805 -247489778 + L1M4 LINE L1 917 1830 -4816 874 282 62 46 chr2 5766804 5766966 -247489617 + L1M4 LINE L1 2302 2460 -4184 * 192 40 0 0 chr2 5766966 5766991 -247489592 + (CA)n Simple_repeat Simple_repeat 2 26 0 874 282 62 46 chr2 5766991 5767541 -247489042 + L1M4 LINE L1 2460 3042 -3602 253 299 113 0 chr2 5769005 5769102 -247487481 + MIR SINE MIR 82 189 -73 386 350 30 20 chr2 5769234 5769437 -247487146 - MIR SINE MIR -34 228 24 199 328 16 0 chr2 5770761 5770825 -247485758 - MIR SINE MIR -110 152 88 185 266 129 73 chr2 5771945 5772069 -247484514 - MIR3 SINE MIR -11 197 67 566 243 10 0 chr2 5772211 5772314 -247484269 + AluJb SINE Alu 2 105 -207 22 0 0 0 chr2 5774158 5774180 -247482403 + AT_rich Low_complexity Low_complexity 1 22 0 896 197 0 7 chr2 5774187 5774422 -247482161 - AluJb SINE Alu -17 295 1 258 32 0 0 chr2 5774440 5774471 -247482112 + (A)n Simple_repeat Simple_repeat 1 31 0 1783 300 152 28 chr2 5774810 5776006 -247480577 + L2 LINE L2 1933 3277 -36 2521 181 59 33 chr2 5776318 5776453 -247480130 + Tigger3(Golem) DNA MER2_type 2434 2564 -465 1498 194 38 7 chr2 5776453 5776742 -247479841 + AluJb SINE Alu 1 298 -14 2521 181 59 33 chr2 5776742 5777186 -247479397 + Tigger3(Golem) DNA MER2_type 2564 3028 -1 2336 66 3 0 chr2 5777579 5777868 -247478715 - AluY SINE Alu -21 290 1 186 43 0 0 chr2 5777887 5777910 -247478673 + (TC)n Simple_repeat Simple_repeat 2 24 0 430 170 21 0 chr2 5777910 5778004 -247478579 + (TA)n Simple_repeat Simple_repeat 2 97 0 197 175 38 12 chr2 5778163 5778177 -247478406 + (TA)n Simple_repeat Simple_repeat 1 13 -69 1912 99 8 8 chr2 5778177 5778440 -247478143 + AluSc SINE Alu 35 297 -12 197 175 38 12 chr2 5778440 5778505 -247478078 + (TA)n Simple_repeat Simple_repeat 13 82 0 827 281 68 35 chr2 5780658 5781178 -247475405 + L1ME LINE L1 1071 1553 -4873 1148 248 73 29 chr2 5781212 5781788 -247474795 + L1ME LINE L1 5290 5889 -557 1899 201 70 27 chr2 5781788 5782232 -247474351 - MLT1C LTR MaLR 0 467 5 1148 248 73 29 chr2 5782232 5782270 -247474313 + L1ME LINE L1 5889 5924 -522 877 120 0 0 chr2 5782955 5783110 -247473473 + AluSp/q SINE Alu 168 322 0 6571 63 141 13 chr2 5783249 5784146 -247472437 - L1PA5 LINE L1 0 6154 5228 23274 54 3 0 chr2 5784249 5787177 -247469406 - L1P LINE L1 -818 5328 2391 230 175 79 48 chr2 5788402 5788465 -247468118 - MLT1G1 LTR MaLR -1 554 490 1403 72 0 15 chr2 5788471 5788666 -247467917 - AluY SINE Alu -13 298 107 338 250 126 18 chr2 5788667 5789020 -247467563 - MLT1G1 LTR MaLR -66 529 83 253 336 77 10 chr2 5789223 5789327 -247467256 - MIR3 SINE MIR -84 124 14 209 265 0 0 chr2 5789787 5789836 -247466747 - MIR SINE MIR -56 206 158 940 219 73 155 chr2 5790060 5790511 -247466072 + MLT2B1 LTR ERVL 1 414 0 23 78 0 0 chr2 5791404 5791455 -247465128 + AT_rich Low_complexity Low_complexity 1 51 0 221 322 35 26 chr2 5793094 5793209 -247463374 + MIR SINE MIR 25 140 -122 2140 139 3 16 chr2 5795370 5795693 -247460890 + L1PA10 LINE L1 5848 6166 -2 37 23 0 0 chr2 5795966 5796010 -247460573 + AT_rich Low_complexity Low_complexity 1 44 0 1785 56 0 5 chr2 5796060 5796273 -247460310 - L1PA3 LINE L1 -2 6153 5942 261 260 0 0 chr2 5796760 5796864 -247459719 + A-rich Low_complexity Low_complexity 1 104 0 332 155 0 0 chr2 5796980 5797038 -247459545 + THE1B LTR MaLR 307 364 0 2221 257 24 49 chr2 5797038 5797909 -247458674 + L1M2 LINE L1 2633 3483 -3365 1507 186 28 7 chr2 5797909 5798200 -247458383 + AluJb SINE Alu 1 297 -15 2221 257 24 49 chr2 5798200 5798299 -247458284 + L1M2 LINE L1 3483 3583 -3265 996 237 74 43 chr2 5799109 5799459 -247457124 - MLT1C LTR MaLR -104 363 3 2327 103 0 6 chr2 5799510 5799821 -247456762 + AluSq SINE Alu 1 309 -4 5287 175 20 15 chr2 5800176 5801356 -247455227 - L1PBb LINE L1 -4845 1359 172 188 375 54 36 chr2 5801648 5801760 -247454823 - MIR3 SINE MIR -87 121 8 210 118 0 0 chr2 5801949 5801983 -247454600 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 232 298 67 112 chr2 5802013 5802325 -247454258 - L2 LINE L2 -47 3225 2928 2307 97 0 0 chr2 5803780 5804069 -247452514 + AluSc SINE Alu 19 307 -2 180 0 0 0 chr2 5804085 5804105 -247452478 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 434 299 185 45 chr2 5804116 5804538 -247452045 + MLT1K LTR MaLR 75 555 -33 672 271 40 40 chr2 5805150 5805327 -247451256 + MER45A DNA AcHobo 1 177 -1 185 131 66 16 chr2 5805333 5805394 -247451189 + (TAGA)n Simple_repeat Simple_repeat 4 67 0 681 230 8 0 chr2 5806161 5806289 -247450294 - FLAM_A SINE Alu -5 128 2 404 305 40 7 chr2 5806858 5807009 -247449574 + MIR SINE MIR 23 178 -84 1512 164 20 43 chr2 5807761 5808065 -247448518 + Tigger2 DNA MER2_type 2421 2717 -1 416 295 120 33 chr2 5809032 5809700 -247446883 + L2 LINE L2 2580 3311 -2 872 287 104 29 chr2 5810258 5810750 -247445833 - MLT1G1 LTR MaLR -17 578 1 226 285 279 17 chr2 5810755 5810934 -247445649 + L2 LINE L2 3047 3272 0 259 319 62 18 chr2 5810972 5811085 -247445498 + L2 LINE L2 3155 3272 0 852 221 33 14 chr2 5811451 5811664 -247444919 + MER20 DNA MER1_type 2 218 -1 600 220 37 17 chr2 5812218 5812393 -247444190 + LTR41 LTR ERVL 9 201 -594 879 204 40 23 chr2 5812534 5812710 -247443873 + AluJo SINE Alu 1 179 -133 1231 167 13 35 chr2 5812812 5813040 -247443543 - THE1C LTR MaLR -152 223 1 10937 105 37 4 chr2 5813040 5814568 -247442015 - THE1B-int LTR MaLR 0 1580 2 1973 115 58 60 chr2 5814569 5814934 -247441649 - THE1B LTR MaLR 0 364 1 728 206 14 0 chr2 5814934 5815075 -247441508 - L1M2 LINE L1 -4212 2637 2495 225 0 0 0 chr2 5815077 5815102 -247441481 + (TG)n Simple_repeat Simple_repeat 2 26 0 779 161 25 6 chr2 5815102 5815263 -247441320 - L1M2 LINE L1 -4676 2173 2010 203 306 122 10 chr2 5815386 5815484 -247441099 + MER5B DNA MER1_type 68 176 -2 307 330 27 9 chr2 5815503 5815615 -247440968 - MIR SINE MIR -66 142 29 415 292 23 0 chr2 5816017 5816147 -247440436 - MIR3 SINE MIR -46 162 30 276 307 98 7 chr2 5816288 5816441 -247440142 + MER5A DNA MER1_type 17 183 -6 203 194 75 86 chr2 5816544 5816637 -247439946 - L2 LINE L2 -5 3267 3176 1932 160 16 34 chr2 5816982 5817370 -247439213 + L1MC1 LINE L1 5939 6319 -14 24 32 0 0 chr2 5817401 5817432 -247439151 + AT_rich Low_complexity Low_complexity 1 31 0 1428 209 39 7 chr2 5817436 5817718 -247438865 - AluJb SINE Alu -11 291 1 278 286 118 8 chr2 5818611 5818730 -247437853 - MIR SINE MIR -6 256 125 2324 87 7 10 chr2 5818747 5819047 -247437536 + AluSq SINE Alu 1 299 -14 593 158 44 3 chr2 5819367 5819498 -247437085 - L1MA4 LINE L1 -143 6148 6015 587 214 71 0 chr2 5819499 5819639 -247436944 + L1MA4 LINE L1 6151 6300 0 185 255 163 10 chr2 5821561 5821659 -247434924 + L2 LINE L2 3138 3250 -22 4973 230 19 11 chr2 5823031 5824270 -247432313 + L1M1 LINE L1 480 2407 -5158 840 193 50 15 chr2 5825500 5825771 -247430812 + MER4B-int LTR ERV1 2259 2960 -2362 987 211 45 59 chr2 5825832 5826617 -247429966 + MER4B-int LTR ERV1 1546 2439 -4319 2592 48 3 10 chr2 5827395 5827708 -247428875 + AluY SINE Alu 1 311 0 270 278 43 81 chr2 5828348 5828465 -247428118 - LTR33 LTR ERVL -19 502 395 2330 192 108 27 chr2 5828465 5828935 -247427648 + MLT2B3 LTR ERVL 3 519 -35 477 34 0 0 chr2 5828935 5828994 -247427589 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 2330 192 108 27 chr2 5828994 5829034 -247427549 + MLT2B3 LTR ERVL 519 554 0 270 278 43 81 chr2 5829034 5829125 -247427458 - LTR33 LTR ERVL -126 395 302 2774 13 7 0 chr2 5829363 5829667 -247426916 - AluYa5 SINE Alu -5 306 1 2004 146 27 0 chr2 5829879 5830180 -247426403 - AluSx SINE Alu -2 310 2 185 402 0 0 chr2 5830624 5830726 -247425857 - MIR SINE MIR -113 149 48 521 285 30 36 chr2 5830908 5831073 -247425510 - MLT1H LTR MaLR -269 280 117 4257 225 26 38 chr2 5831173 5831838 -247424745 - L1 LINE L1 -2696 4512 3841 1684 177 20 7 chr2 5831838 5832132 -247424451 - AluSx SINE Alu -14 298 1 4257 225 26 38 chr2 5832132 5833004 -247423579 - L1 LINE L1 -3367 3841 2993 882 140 61 64 chr2 5833004 5833196 -247423387 - THE1B LTR MaLR 0 364 179 3346 209 33 23 chr2 5833297 5834153 -247422430 - L1 LINE L1 -4778 2431 1568 2758 214 78 0 chr2 5834164 5834740 -247421843 - L1 LINE L1 -6405 804 184 21 82 0 0 chr2 5834744 5834793 -247421790 + AT_rich Low_complexity Low_complexity 1 49 0 1161 231 23 13 chr2 5836492 5836791 -247419792 - AluJb SINE Alu 0 302 1 315 0 0 0 chr2 5837227 5837262 -247419321 + (TG)n Simple_repeat Simple_repeat 2 36 0 2046 124 3 3 chr2 5837290 5837588 -247418995 - AluY SINE Alu -13 298 1 506 276 33 28 chr2 5837600 5837611 -247418972 - L1M3c LINE L1 -4846 1119 1110 2234 89 4 0 chr2 5837611 5837892 -247418691 - AluY SINE Alu -29 282 1 506 276 33 28 chr2 5837892 5838094 -247418489 - L1M3c LINE L1 -4855 1110 898 24 67 0 0 chr2 5838152 5838197 -247418386 + AT_rich Low_complexity Low_complexity 1 45 0 1776 165 118 48 chr2 5838337 5838379 -247418204 - MSTA LTR MaLR 0 428 390 2115 143 21 26 chr2 5838379 5838756 -247417827 + THE1C LTR MaLR 1 375 0 1776 165 118 48 chr2 5838756 5839113 -247417470 - MSTA LTR MaLR -38 390 1 2056 172 6 0 chr2 5839114 5839474 -247417109 - MSTA-int LTR MaLR -1 1650 1289 383 188 25 0 chr2 5839474 5839554 -247417029 - MSTA-int LTR MaLR -1523 128 47 182 263 152 10 chr2 5839863 5839962 -247416621 + L2 LINE L2 3138 3250 -22 509 278 76 65 chr2 5843410 5843673 -247412910 - MLT1J LTR MaLR -244 267 2 195 235 0 0 chr2 5844741 5844792 -247411791 + (TG)n Simple_repeat Simple_repeat 2 52 0 342 0 0 0 chr2 5844914 5844952 -247411631 + (CA)n Simple_repeat Simple_repeat 2 39 0 24 0 0 0 chr2 5845888 5845912 -247410671 + AT_rich Low_complexity Low_complexity 1 24 0 186 342 103 8 chr2 5848199 5848316 -247408267 + MIR SINE MIR 122 249 -13 236 281 70 0 chr2 5848503 5848560 -247408023 + MIR SINE MIR 66 126 -82 1698 206 28 0 chr2 5852281 5852737 -247403846 - MLT2B1 LTR ERVL 0 520 1 216 297 16 0 chr2 5853904 5853968 -247402615 - MIR SINE MIR -110 152 88 318 264 29 106 chr2 5855401 5855609 -247400974 + L1MEd LINE L1 332 523 -5596 396 0 0 0 chr2 5856250 5856294 -247400289 + (CA)n Simple_repeat Simple_repeat 2 45 0 228 35 0 0 chr2 5857133 5857162 -247399421 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 2127 101 11 0 chr2 5857163 5857440 -247399143 - AluSp SINE Alu -33 280 1 322 324 72 53 chr2 5859049 5859405 -247397178 - L2 LINE L2 -27 3245 2725 261 273 70 39 chr2 5859692 5859820 -247396763 - L2 LINE L2 -935 2379 2248 679 194 7 0 chr2 5860099 5860243 -247396340 + L1MA9 LINE L1 6166 6310 -2 1762 187 13 7 chr2 5860265 5860575 -247396008 + AluJb SINE Alu 1 312 0 396 292 81 27 chr2 5861666 5861851 -247394732 - MIR SINE MIR -9 253 59 2773 16 0 10 chr2 5862111 5862424 -247394159 + AluYa5 SINE Alu 1 310 -1 1690 214 13 34 chr2 5862685 5863064 -247393519 - MLT1A2 LTR MaLR -2 372 2 611 258 171 15 chr2 5863137 5863401 -247393182 + MLT1G1 LTR MaLR 291 595 0 566 296 74 54 chr2 5864148 5864540 -247392043 + L2 LINE L2 2914 3313 0 237 132 0 0 chr2 5865291 5865329 -247391254 + (TA)n Simple_repeat Simple_repeat 1 38 0 184 293 17 0 chr2 5865805 5865863 -247390720 - MIR SINE MIR -6 256 198 1240 91 0 141 chr2 5866400 5866554 -247390029 + MER30 DNA MER1_type 5 114 -116 1654 42 0 5 chr2 5866554 5866745 -247389838 - L1PA5 LINE L1 0 6154 5965 1240 91 0 141 chr2 5866745 5866832 -247389751 + MER30 DNA MER1_type 114 212 -18 1966 140 42 0 chr2 5866962 5867270 -247389313 + THE1B LTR MaLR 39 359 -5 241 290 165 49 chr2 5868344 5868568 -247388015 - MIR SINE MIR -1 261 12 2038 171 147 5 chr2 5869147 5869556 -247387027 - MLT1C LTR MaLR 0 467 1 1529 227 32 0 chr2 5870135 5870448 -247386135 + MLT1A1 LTR MaLR 1 323 -42 1807 94 11 26 chr2 5870468 5870735 -247385848 - L1PA11 LINE L1 -21 6153 5891 183 80 0 0 chr2 5871803 5871828 -247384755 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 354 293 69 26 chr2 5872706 5872822 -247383761 - MIR SINE MIR -69 139 19 1936 62 8 4 chr2 5874771 5875012 -247381571 - L1PA6 LINE L1 0 6154 5913 1315 253 51 16 chr2 5876549 5876921 -247379662 + MLT1E3 LTR MaLR 147 531 -93 2288 211 52 42 chr2 5877016 5877652 -247378931 - L1MB7 LINE L1 -67 6353 5712 201 208 21 0 chr2 5877723 5877771 -247378812 + (TA)n Simple_repeat Simple_repeat 1 49 0 4941 246 67 19 chr2 5877771 5878411 -247378172 - L1MB7 LINE L1 -874 5508 4900 1906 126 4 11 chr2 5878411 5878702 -247377881 + AluSx SINE Alu 15 303 0 4941 246 67 19 chr2 5878702 5879702 -247376881 - L1MB7 LINE L1 -1482 4900 3789 1056 127 20 0 chr2 5879706 5879856 -247376727 + AluSg/x SINE Alu 121 273 -39 246 32 0 0 chr2 5879857 5879888 -247376695 + (TC)n Simple_repeat Simple_repeat 2 32 0 342 250 0 22 chr2 5879894 5879986 -247376597 - L1MC4 LINE L1 -1339 6703 6614 192 234 0 0 chr2 5879986 5880033 -247376550 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 308 200 31 0 chr2 5880034 5880099 -247376484 - L1MC4 LINE L1 -1339 6703 6637 464 256 241 0 chr2 5880213 5880529 -247376054 - L1MB7 LINE L1 -2875 3507 3116 550 86 32 0 chr2 5880633 5880726 -247375857 + CT-rich Low_complexity Low_complexity 1 96 0 1530 179 58 14 chr2 5880737 5881028 -247375555 - AluJo SINE Alu -8 304 1 524 218 19 58 chr2 5881035 5881241 -247375342 - L1MB7 LINE L1 -4181 2203 2006 496 349 20 49 chr2 5881419 5881778 -247374805 + L2 LINE L2 2658 3005 -308 1999 212 26 64 chr2 5881813 5882358 -247374225 + MLT2B3 LTR ERVL 1 406 -38 256 103 0 77 chr2 5882358 5882436 -247374147 + (TA)n Simple_repeat Simple_repeat 2 73 0 267 117 67 117 chr2 5882444 5882504 -247374079 + MLT2A2 LTR ERVL 399 453 0 459 287 90 27 chr2 5882514 5882737 -247373846 + L2 LINE L2 3074 3310 -3 589 286 0 19 chr2 5883714 5883875 -247372708 + MIR SINE MIR 105 262 0 286 238 157 70 chr2 5884435 5884493 -247372090 + L2 LINE L2 2573 2625 -689 2491 114 117 8 chr2 5884493 5884879 -247371704 + MSTA LTR MaLR 1 428 0 286 238 157 70 chr2 5884879 5884992 -247371591 + L2 LINE L2 2625 2759 -555 211 287 171 16 chr2 5885133 5885262 -247371321 + L2 LINE L2 2995 3143 -170 543 198 185 25 chr2 5885299 5885456 -247371127 - MER4C LTR ERV1 0 465 284 2327 91 3 78 chr2 5885504 5885890 -247370693 - MER4A LTR ERV1 -307 357 1 1903 104 20 30 chr2 5886134 5886431 -247370152 + AluSq SINE Alu 5 298 -15 613 339 39 9 chr2 5886431 5886661 -247369922 + MIR SINE MIR 22 258 -4 1845 204 45 60 chr2 5887324 5887794 -247368789 + MLT1C LTR MaLR 4 466 -1 21 0 0 0 chr2 5888304 5888325 -247368258 + AT_rich Low_complexity Low_complexity 1 21 0 695 175 104 27 chr2 5890457 5890640 -247365943 + MLT1F LTR MaLR 1 197 -370 286 229 16 0 chr2 5890669 5890791 -247365792 + CT-rich Low_complexity Low_complexity 1 124 0 702 212 275 0 chr2 5890824 5891060 -247365523 + MLT1F LTR MaLR 240 540 -2 243 236 0 42 chr2 5891852 5891924 -247364659 + MLT1F1 LTR MaLR 499 567 0 212 302 0 0 chr2 5892254 5892307 -247364276 - L2 LINE L2 -2 3270 3218 669 226 40 40 chr2 5892552 5892701 -247363882 + MER45A DNA AcHobo 2 153 -1428 1844 179 82 9 chr2 5892701 5893041 -247363542 + MLT1A1 LTR MaLR 1 365 0 669 226 40 40 chr2 5893041 5893068 -247363515 + MER45A DNA AcHobo 152 178 0 377 323 31 69 chr2 5893143 5893403 -247363180 - LTR16A1 LTR ERVL -10 447 198 2439 172 31 14 chr2 5893484 5893908 -247362675 + MSTB1 LTR MaLR 1 431 -1 223 367 0 20 chr2 5894620 5894718 -247361865 - L2 LINE L2 -56 3257 3162 196 348 63 25 chr2 5894824 5894982 -247361601 - L2 LINE L2 -472 2842 2679 182 300 43 0 chr2 5895017 5895087 -247361496 + MIR3 SINE MIR 129 201 -7 832 221 77 10 chr2 5895145 5895340 -247361243 + MER20 DNA MER1_type 12 219 0 284 279 65 58 chr2 5897277 5897431 -247359152 + MER104 DNA Tc2 25 179 -1 33 56 0 0 chr2 5897562 5897616 -247358967 + AT_rich Low_complexity Low_complexity 1 54 0 291 250 78 43 chr2 5897886 5898002 -247358581 - MIR3 SINE MIR -54 154 35 227 305 52 45 chr2 5898758 5898912 -247357671 - MIR SINE MIR -42 220 66 673 318 27 12 chr2 5899304 5899562 -247357021 + MIR SINE MIR 1 262 0 241 391 65 0 chr2 5899750 5899888 -247356695 - L2 LINE L2 -3 3269 3123 23 0 0 0 chr2 5900549 5900572 -247356011 + AT_rich Low_complexity Low_complexity 1 23 0 209 174 0 43 chr2 5900679 5900725 -247355858 + (TGAA)n Simple_repeat Simple_repeat 1 44 0 358 336 141 0 chr2 5901650 5901799 -247354784 + MIR SINE MIR 80 249 -13 180 0 0 0 chr2 5902585 5902605 -247353978 + (TTTTTG)n Simple_repeat Simple_repeat 3 22 0 267 374 32 0 chr2 5903732 5903855 -247352728 - MIR SINE MIR -77 185 59 353 206 16 0 chr2 5903922 5903985 -247352598 - L1MC4 LINE L1 -1147 6895 6832 209 308 96 48 chr2 5904461 5904565 -247352018 - MIR SINE MIR -61 147 39 2805 115 0 6 chr2 5904900 5905266 -247351317 + THE1B LTR MaLR 1 364 0 285 328 34 62 chr2 5905276 5905453 -247351130 + HAL1 LINE L1 36 207 -2300 2288 90 0 34 chr2 5905848 5906170 -247350413 + AluY SINE Alu 1 311 0 8941 237 29 37 chr2 5906617 5912182 -247344401 + L1PA13 LINE L1 10 4998 -2586 1383 206 0 0 chr2 5912172 5912454 -247344129 + L1P LINE L1 4933 5214 -932 * 9526 183 10 16 chr2 5912455 5915010 -247341573 + L1PA13 LINE L1 5016 7601 0 293 265 0 0 chr2 5915358 5915426 -247341157 - MER58 DNA MER1_type 0 2420 2353 228 389 0 0 chr2 5915418 5915531 -247341052 - MER58 DNA MER1_type -2139 281 169 * 212 75 0 50 chr2 5918297 5918337 -247338246 + (GGGA)n Simple_repeat Simple_repeat 1 38 0 398 364 57 43 chr2 5919234 5919674 -247336909 + L3 LINE CR1 222 667 -910 3944 128 67 38 chr2 5920702 5921392 -247335191 - L1MA9 LINE L1 0 6312 5603 2232 190 21 73 chr2 5921508 5922356 -247334227 - L1MA9 LINE L1 -682 5630 4813 607 322 0 14 chr2 5922358 5922569 -247334014 + MIR SINE MIR 45 252 -10 259 274 0 0 chr2 5922657 5922719 -247333864 - MIR SINE MIR -17 245 184 241 222 19 0 chr2 5922805 5922859 -247333724 + (TTA)n Simple_repeat Simple_repeat 1 55 0 846 156 7 0 chr2 5923248 5923389 -247333194 + L1MA8 LINE L1 6145 6286 -5 266 288 196 18 chr2 5924278 5924441 -247332142 - MIR SINE MIR -66 196 5 309 285 199 8 chr2 5924445 5924601 -247331982 - MIR3 SINE MIR -16 192 2 203 269 58 0 chr2 5927215 5927267 -247329316 + MIR SINE MIR 94 148 -60 206 252 19 68 chr2 5927537 5927640 -247328943 - MIR SINE MIR -51 211 114 311 270 61 86 chr2 5930219 5930382 -247326201 + MIR SINE MIR 34 192 -70 23 0 0 0 chr2 5930451 5930474 -247326109 + AT_rich Low_complexity Low_complexity 1 23 0 757 229 24 7 chr2 5930807 5931029 -247325554 - MLT1A2 LTR MaLR -2 386 154 610 287 56 15 chr2 5931055 5931250 -247325333 - MLT1A2 LTR MaLR -171 203 1 22 0 0 0 chr2 5932017 5932039 -247324544 + AT_rich Low_complexity Low_complexity 1 22 0 240 247 0 0 chr2 5932157 5932242 -247324341 + CT-rich Low_complexity Low_complexity 2 86 0 1611 78 10 5 chr2 5932917 5933149 -247323434 + AluSg/x SINE Alu 78 310 0 249 274 108 49 chr2 5935171 5935273 -247321310 - MIR SINE MIR -75 133 26 183 248 69 79 chr2 5936528 5936629 -247319954 + L3 LINE CR1 837 936 -641 1344 226 30 39 chr2 5939448 5939873 -247316710 - L1MD3 LINE L1 0 8042 7634 2172 95 3 0 chr2 5941267 5941586 -247314997 - AluSx SINE Alu 0 320 1 385 355 48 35 chr2 5944036 5944267 -247312316 - L2 LINE L2 -188 3084 2851 219 267 33 0 chr2 5944359 5944419 -247312164 - L2 LINE L2 -22 3291 3230 705 213 37 84 chr2 5944655 5945192 -247311391 + L1MC4 LINE L1 7373 8036 -6 2010 57 0 4 chr2 5945478 5945723 -247310860 + AluY SINE Alu 1 244 -67 221 365 25 45 chr2 5947146 5947346 -247309237 + MIR SINE MIR 53 248 -14 2371 226 32 12 chr2 5948064 5948168 -247308415 - L1MA9 LINE L1 -39 6273 6173 198 71 0 0 chr2 5948168 5948196 -247308387 + (TG)n Simple_repeat Simple_repeat 1 28 0 2371 226 32 12 chr2 5948196 5948653 -247307930 - L1MA9 LINE L1 -139 6173 5701 247 284 75 0 chr2 5948840 5948907 -247307676 - L2 LINE L2 -1 3271 3200 327 189 0 14 chr2 5949386 5949460 -247307123 - L1ME2 LINE L1 -15 6149 6077 * 436 259 186 14 chr2 5949458 5949678 -247306905 - L1M4 LINE L1 -1020 5126 4869 2191 89 4 0 chr2 5950849 5951168 -247305415 - AluY SINE Alu 0 320 1 3026 135 41 2 chr2 5952141 5952609 -247303974 + LTR19A LTR ERV1 1 486 0 188 353 67 34 chr2 5953529 5953648 -247302935 + MIR3 SINE MIR 3 125 -83 1848 154 0 3 chr2 5953838 5954131 -247302452 + AluSg SINE Alu 9 300 -10 180 0 0 0 chr2 5954555 5954575 -247302008 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1764 180 49 27 chr2 5955337 5955704 -247300879 - THE1C LTR MaLR 0 375 1 2837 207 28 5 chr2 5956164 5956743 -247299840 + MER6A DNA MER2_type 1 592 -13 236 208 112 80 chr2 5956800 5956925 -247299658 - MIR SINE MIR -69 193 65 234 298 165 8 chr2 5958184 5958305 -247298278 - MLT1J2 LTR MaLR -24 426 287 10228 155 48 10 chr2 5958618 5960411 -247296172 - Tigger2 DNA MER2_type -3 2715 854 204 263 0 0 chr2 5960413 5960489 -247296094 + (TA)n Simple_repeat Simple_repeat 2 77 0 264 202 60 0 chr2 5960620 5960704 -247295879 + (TA)n Simple_repeat Simple_repeat 2 90 0 217 224 0 17 chr2 5960699 5960757 -247295826 + GA-rich Low_complexity Low_complexity 2 58 0 * 237 297 36 18 chr2 5961097 5961262 -247295321 + L1MC/D LINE L1 5292 5459 -900 21 36 0 0 chr2 5961730 5961758 -247294825 + AT_rich Low_complexity Low_complexity 1 28 0 253 262 0 0 chr2 5961858 5961919 -247294664 + GA-rich Low_complexity Low_complexity 2 62 0 581 262 16 49 chr2 5961920 5962164 -247294419 + HAL1b LINE L1 345 580 -768 21 71 0 0 chr2 5962181 5962223 -247294360 + AT_rich Low_complexity Low_complexity 1 42 0 227 283 30 10 chr2 5962284 5962383 -247294200 + HAL1b LINE L1 444 544 -804 558 284 95 46 chr2 5962404 5962731 -247293852 + HAL1b LINE L1 613 955 -393 4316 111 16 17 chr2 5962788 5963479 -247293104 - L1PB1 LINE L1 0 6151 5462 263 197 30 15 chr2 5963592 5963658 -247292925 - L1PB1 LINE L1 -804 5350 5284 11139 211 37 40 chr2 5963828 5966036 -247290547 - L1PB1 LINE L1 -215 6652 4440 2233 102 0 7 chr2 5966036 5966331 -247290252 - AluSc SINE Alu -16 293 1 11139 211 37 40 chr2 5966331 5966817 -247289766 - L1PB1 LINE L1 -2427 4440 3954 1720 77 0 14 chr2 5966817 5967037 -247289546 + AluY SINE Alu 80 296 -15 11139 211 37 40 chr2 5967037 5969093 -247287490 - L1PB1 LINE L1 -2913 3954 1932 1413 216 63 23 chr2 5969109 5969457 -247287126 - LTR10A LTR ERV1 -67 542 181 4014 123 22 14 chr2 5969590 5970749 -247285834 - L1PBa LINE L1 -4926 1937 625 1061 174 15 0 chr2 5970741 5970936 -247285647 - L1PBa LINE L1 -6663 200 3 * 933 127 8 0 chr2 5971285 5971419 -247285164 - AluSg/x SINE Alu -14 298 164 1840 135 46 0 chr2 5971603 5971913 -247284670 + AluSx SINE Alu 1 312 0 254 319 21 14 chr2 5973879 5974020 -247282563 + L1MA9 LINE L1 6133 6274 -38 189 159 0 114 chr2 5974043 5974087 -247282496 + L2 LINE L2 3223 3261 -11 468 0 0 0 chr2 5975185 5975237 -247281346 + (CA)n Simple_repeat Simple_repeat 2 53 0 367 257 62 49 chr2 5975291 5975435 -247281148 - MIR SINE MIR -56 206 61 229 235 37 26 chr2 5975534 5975674 -247280909 + L2 LINE L2 3116 3310 -3 405 281 125 66 chr2 5976395 5976804 -247279779 + MLT1H LTR MaLR 115 547 -2 226 316 22 81 chr2 5977305 5977441 -247279142 + MIR SINE MIR 19 146 -116 361 318 78 7 chr2 5979563 5979717 -247276866 + MIR SINE MIR 87 251 -11 21 71 0 0 chr2 5982808 5982850 -247273733 + AT_rich Low_complexity Low_complexity 1 42 0 1072 187 75 85 chr2 5983047 5983422 -247273161 + THE1C LTR MaLR 5 375 0 440 214 94 0 chr2 5983422 5983539 -247273044 + THE1C-int LTR MaLR 1 128 -1523 1936 150 6 0 chr2 5983539 5983853 -247272730 + THE1C-int LTR MaLR 1289 1604 -47 773 150 101 97 chr2 5983966 5984130 -247272453 + MSTA LTR MaLR 221 388 -40 2089 141 21 26 chr2 5984130 5984507 -247272076 - THE1C LTR MaLR 0 375 1 773 150 101 97 chr2 5984507 5984549 -247272034 + MSTA LTR MaLR 388 428 0 343 274 32 48 chr2 5984614 5984738 -247271845 + L1M4 LINE L1 5032 5153 -993 1563 236 48 21 chr2 5984792 5984994 -247271589 + L1M3c LINE L1 1262 1457 -5014 2459 73 3 0 chr2 5984994 5985297 -247271286 + AluY SINE Alu 1 304 -7 1563 236 48 21 chr2 5985297 5985675 -247270908 + L1M3c LINE L1 1457 1955 -4516 193 252 30 8 chr2 5985684 5985815 -247270768 + (TA)n Simple_repeat Simple_repeat 1 134 0 2960 257 65 40 chr2 5985850 5988261 -247268322 + L1M4c LINE L1 1442 3955 -2427 2367 196 41 53 chr2 5988328 5988530 -247268053 + L1MC3 LINE L1 7187 7390 -395 4913 45 0 0 chr2 5988530 5989126 -247267457 + L1PA5 LINE L1 5556 6151 -3 297 0 0 0 chr2 5989136 5989169 -247267414 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 2367 196 41 53 chr2 5989169 5989561 -247267022 + L1MC3 LINE L1 7399 7785 0 520 209 8 29 chr2 5990088 5990303 -247266280 + CT-rich Low_complexity Low_complexity 1 382 -23 1117 40 34 17 chr2 5990303 5990478 -247266105 + (TTTC)n Simple_repeat Simple_repeat 2 179 0 520 209 8 29 chr2 5990478 5990502 -247266081 + CT-rich Low_complexity Low_complexity 382 405 0 783 196 21 11 chr2 5990636 5990825 -247265758 + L1MA3 LINE L1 6114 6304 -1 183 129 0 0 chr2 5990830 5990861 -247265722 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 2029 116 39 0 chr2 5991008 5991292 -247265291 + AluSq SINE Alu 1 295 -18 1748 194 39 19 chr2 5992614 5993072 -247263511 - MLT2B1 LTR ERVL -2 513 1 21 0 0 0 chr2 5993798 5993819 -247262764 + AT_rich Low_complexity Low_complexity 1 21 0 366 239 84 42 chr2 5993985 5994127 -247262456 - MLT1J2 LTR MaLR -19 431 284 457 266 24 16 chr2 5994249 5994373 -247262210 + MER94 DNA DNA 1 125 -9 317 281 45 19 chr2 5994378 5994512 -247262071 - MLT1J2 LTR MaLR -304 142 6 295 282 113 81 chr2 5994607 5994855 -247261728 - MIR SINE MIR -6 256 1 233 293 53 67 chr2 5994979 5995129 -247261454 - L2 LINE L2 -55 3258 3111 226 309 59 0 chr2 5995725 5995793 -247260790 + MIR SINE MIR 90 161 -101 274 338 120 15 chr2 5995831 5995964 -247260619 - MIR SINE MIR -67 195 49 2265 97 3 7 chr2 5996051 5996350 -247260233 + AluY SINE Alu 1 298 -13 624 191 43 0 chr2 5996522 5996637 -247259946 + FLAM_C SINE Alu 14 133 -10 1446 201 35 6 chr2 5996638 5996981 -247259602 + L1MA8 LINE L1 5938 6290 -1 390 308 84 42 chr2 5997140 5997497 -247259086 + L1ME4a LINE L1 5748 6119 -2 231 133 0 0 chr2 5998213 5998258 -247258325 + (CA)n Simple_repeat Simple_repeat 2 46 0 1663 115 70 0 chr2 5998295 5998582 -247258001 + L1MA8 LINE L1 5980 6286 -5 33 0 0 0 chr2 5999801 5999834 -247256749 + AT_rich Low_complexity Low_complexity 1 33 0 206 203 0 17 chr2 5999888 5999947 -247256636 + GA-rich Low_complexity Low_complexity 1 58 0 931 153 71 6 chr2 6000321 6000491 -247256092 + MLT1A1 LTR MaLR 185 365 0 245 269 76 50 chr2 6000574 6000693 -247255890 + MLT1K LTR MaLR 407 528 -60 5395 129 18 3 chr2 6001082 6001968 -247254615 + L1PB1 LINE L1 4898 5806 -345 261 0 0 0 chr2 6001968 6001997 -247254586 + (TA)n Simple_repeat Simple_repeat 2 30 0 5395 129 18 3 chr2 6001997 6002346 -247254237 + L1PB1 LINE L1 5806 6148 -3 350 226 0 36 chr2 6002400 6002484 -247254099 + MIR SINE MIR 182 262 0 214 300 14 14 chr2 6003049 6003119 -247253464 + CT-rich Low_complexity Low_complexity 2 71 0 2579 87 8 46 chr2 6003137 6003527 -247253056 + THE1C LTR MaLR 1 375 0 1027 307 19 5 chr2 6003741 6004112 -247252471 + L1MEc LINE L1 308 683 -5713 1567 207 79 58 chr2 6004113 6004758 -247251825 + L1M1 LINE L1 4639 5269 -930 1954 147 0 28 chr2 6004758 6005078 -247251505 + AluSx SINE Alu 1 311 -1 189 0 0 0 chr2 6005078 6005099 -247251484 + (TA)n Simple_repeat Simple_repeat 1 21 0 261 0 0 0 chr2 6005098 6005127 -247251456 + (CA)n Simple_repeat Simple_repeat 2 30 0 1567 207 79 58 chr2 6005099 6005292 -247251291 + L1M1 LINE L1 5268 5461 -738 29 0 0 0 chr2 6005386 6005415 -247251168 + AT_rich Low_complexity Low_complexity 1 29 0 1710 194 108 14 chr2 6005463 6005881 -247250702 + MSTB2 LTR MaLR 1 457 0 456 271 25 88 chr2 6006021 6006261 -247250322 - L1ME1 LINE L1 -47 6119 5895 * 934 271 41 39 chr2 6006254 6006689 -247249894 - L1ME1 LINE L1 -160 6006 5571 417 278 82 64 chr2 6006905 6007549 -247249034 - L1MEd LINE L1 -4870 1249 594 298 20 82 20 chr2 6007748 6007797 -247248786 - MLT2A1 LTR ERVL 0 444 393 * 326 58 19 19 chr2 6007783 6007835 -247248748 + MLT2A2 LTR ERVL 400 451 -2 249 650 0 13 chr2 6007864 6008021 -247248562 + (TA)n Simple_repeat Simple_repeat 1 155 0 387 54 0 18 chr2 6008021 6008077 -247248506 + MLT2A2 LTR ERVL 399 453 0 222 37 0 0 chr2 6008208 6008235 -247248348 + (TA)n Simple_repeat Simple_repeat 2 28 0 2663 87 34 8 chr2 6008235 6008615 -247247968 - MLT2A1 LTR ERVL -54 390 1 366 297 79 42 chr2 6009029 6009194 -247247389 + MIR3 SINE MIR 28 198 -10 267 263 22 0 chr2 6009818 6009891 -247246692 - MIR SINE MIR -87 121 45 823 268 166 13 chr2 6010474 6010926 -247245657 - MLT1H LTR MaLR -25 524 4 243 0 0 0 chr2 6011466 6011493 -247245090 + (T)n Simple_repeat Simple_repeat 1 27 0 724 209 91 5 chr2 6012209 6012419 -247244164 - L1MB8 LINE L1 -6 6172 5945 410 214 11 22 chr2 6013687 6013865 -247242718 + (CA)n Simple_repeat Simple_repeat 1 176 0 437 206 11 22 chr2 6013911 6014091 -247242492 + (CA)n Simple_repeat Simple_repeat 1 178 0 451 228 19 6 chr2 6014144 6014461 -247242122 + (CA)n Simple_repeat Simple_repeat 1 321 0 358 341 36 14 chr2 6014785 6015061 -247241522 + Charlie7 DNA MER1_type 1 282 -2330 1494 139 12 0 chr2 6015084 6015336 -247241247 - Tigger5 DNA MER2_type -7 2316 2062 423 312 24 5 chr2 6015419 6015624 -247240959 + Charlie7 DNA MER1_type 334 542 -2070 1246 252 72 42 chr2 6015664 6016276 -247240307 + Charlie7 DNA MER1_type 1720 2349 -263 328 227 100 0 chr2 6016542 6016652 -247239931 + MER58B DNA MER1_type 221 341 0 2201 103 3 17 chr2 6017653 6017953 -247238630 - AluSg SINE Alu -14 296 1 1635 173 0 11 chr2 6018052 6018318 -247238265 - AluJb SINE Alu -49 263 1 633 291 12 36 chr2 6019252 6019503 -247237080 - MIR SINE MIR -6 256 12 183 306 0 0 chr2 6019866 6019915 -247236668 + L2 LINE L2 3265 3313 0 237 196 0 0 chr2 6020326 6020382 -247236201 + (TG)n Simple_repeat Simple_repeat 2 57 0 200 118 29 0 chr2 6020390 6020424 -247236159 + (TATG)n Simple_repeat Simple_repeat 4 38 0 735 120 0 0 chr2 6020761 6020869 -247235714 + L1MA3 LINE L1 6196 6303 -2 22 0 0 0 chr2 6020901 6020923 -247235660 + AT_rich Low_complexity Low_complexity 1 22 0 298 244 103 0 chr2 6021246 6021324 -247235259 + L2 LINE L2 3170 3255 -17 1355 184 164 109 chr2 6022465 6023171 -247233412 + LTR1B LTR ERV1 1 745 -81 389 287 9 0 chr2 6023254 6023369 -247233214 + LTR28 LTR ERV1 905 1020 0 259 272 0 65 chr2 6023617 6023709 -247232874 + MER5A DNA MER1_type 54 139 -50 2219 129 0 3 chr2 6023714 6024023 -247232560 - AluSq SINE Alu -3 310 3 23 0 0 0 chr2 6024028 6024051 -247232532 + AT_rich Low_complexity Low_complexity 1 23 0 608 98 10 49 chr2 6024495 6024597 -247231986 + MER4A LTR ERV1 1 98 -566 1543 150 3 77 chr2 6024597 6024970 -247231613 + MER4A LTR ERV1 261 664 0 1821 122 0 0 chr2 6025377 6025615 -247230968 - AluSx SINE Alu -74 238 1 188 304 0 18 chr2 6025820 6025876 -247230707 + L2 LINE L2 3235 3289 -24 199 61 61 0 chr2 6027964 6027997 -247228586 + A-rich Low_complexity Low_complexity 3 37 0 237 222 0 0 chr2 6028310 6028373 -247228210 + L1ME4a LINE L1 5099 5161 -985 7007 45 19 0 chr2 6028386 6029841 -247226742 + L1PA6 LINE L1 4682 6154 0 297 243 21 15 chr2 6029896 6030003 -247226580 + L1ME4a LINE L1 5157 5269 -877 369 0 0 0 chr2 6030003 6030044 -247226539 + (CA)n Simple_repeat Simple_repeat 2 42 0 297 243 21 15 chr2 6030044 6030071 -247226512 + L1ME4a LINE L1 5269 5294 -852 350 277 62 112 chr2 6030391 6030748 -247225835 + L1ME4a LINE L1 5782 6120 -1 180 284 119 18 chr2 6031907 6032016 -247224567 + MIR SINE MIR 23 142 -66 182 313 45 15 chr2 6033316 6033383 -247223200 + MIR SINE MIR 105 173 -89 385 312 82 12 chr2 6033436 6033606 -247222977 - L2 LINE L2 -15 3298 3117 264 234 16 0 chr2 6033776 6033840 -247222743 + L2 LINE L2 2723 2787 -527 487 302 94 5 chr2 6034915 6035107 -247221476 + MIR SINE MIR 48 256 -6 1107 81 0 27 chr2 6035397 6035514 -247221069 + (TTTC)n Simple_repeat Simple_repeat 1 293 0 1107 81 0 27 chr2 6035514 6035699 -247220884 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 237 297 113 66 chr2 6036056 6036268 -247220315 - MIR SINE MIR -7 255 34 263 353 17 17 chr2 6036503 6036622 -247219961 + MIR SINE MIR 37 155 -107 478 308 0 0 chr2 6037245 6037365 -247219218 - HERVL LTR ERVL -1432 4222 4103 191 298 106 0 chr2 6038149 6038243 -247218340 - L3b LINE CR1 -253 1330 1227 2136 154 0 0 chr2 6038499 6038810 -247217773 + AluSx SINE Alu 1 311 -1 278 167 302 0 chr2 6089136 6089232 -247167351 - L1ME3A LINE L1 0 6170 6046 435 19 0 0 chr2 6089323 6089375 -247167208 + (TG)n Simple_repeat Simple_repeat 2 53 0 272 229 73 9 chr2 6089567 6089676 -247166907 - L1M4 LINE L1 -1932 4214 4099 3124 231 41 24 chr2 6089685 6091218 -247165365 + L1MB7 LINE L1 4623 6179 -5 408 125 42 0 chr2 6091218 6091290 -247165293 + AluS SINE Alu 1 75 -228 854 188 0 6 chr2 6092085 6092266 -247164317 + (CA)n Simple_repeat Simple_repeat 1 180 0 275 226 259 25 chr2 6093221 6093460 -247163123 - LTR50 LTR ERVL -4 791 497 347 259 54 60 chr2 6093596 6093762 -247162821 - LTR50 LTR ERVL -615 180 16 186 315 96 55 chr2 6094090 6094236 -247162347 - L2 LINE L2 -48 3224 3073 234 81 0 0 chr2 6094318 6094355 -247162228 + (T)n Simple_repeat Simple_repeat 1 37 0 196 328 118 0 chr2 6094776 6094895 -247161688 - MIR3 SINE MIR -43 165 33 2331 103 3 0 chr2 6095517 6095829 -247160754 - AluSq SINE Alu 0 313 1 292 321 128 66 chr2 6096120 6096543 -247160040 + L2 LINE L2 2811 3259 -13 239 191 0 29 chr2 6098365 6098373 -247158210 + (TA)n Simple_repeat Simple_repeat 1 8 -58 2362 149 20 43 chr2 6098373 6098816 -247157767 - Tigger2a DNA MER2_type 0 434 2 239 191 0 29 chr2 6098816 6098862 -247157721 + (TA)n Simple_repeat Simple_repeat 8 55 -11 1690 186 54 9 chr2 6098862 6099195 -247157388 + MER7A DNA MER2_type 1 346 0 239 191 0 29 chr2 6099195 6099207 -247157376 + (TA)n Simple_repeat Simple_repeat 55 66 0 388 261 48 38 chr2 6099893 6100126 -247156457 + L1ME LINE L1 5214 5443 -727 11566 154 25 11 chr2 6100232 6102238 -247154345 + Tigger1 DNA MER2_type 1 2034 -384 337 102 0 0 chr2 6102323 6102372 -247154211 + Tigger1 DNA MER2_type 2044 2092 -326 437 78 62 0 chr2 6102373 6102437 -247154146 + Alu SINE Alu 223 290 -21 1765 178 34 0 chr2 6102439 6102765 -247153818 + Tigger1 DNA MER2_type 2080 2416 -2 974 233 57 56 chr2 6103091 6103624 -247152959 - L1PBb LINE L1 -4798 1405 781 186 382 61 23 chr2 6103866 6104128 -247152455 - L2 LINE L2 -991 2323 2052 26 0 0 0 chr2 6104700 6104726 -247151857 + AT_rich Low_complexity Low_complexity 1 26 0 800 178 71 46 chr2 6105257 6105454 -247151129 + MER58A DNA MER1_type 4 205 -19 215 273 80 87 chr2 6105928 6106078 -247150505 - MER5A DNA MER1_type -40 149 1 298 246 56 47 chr2 6108281 6108436 -247148147 + MIR SINE MIR 2 151 -57 640 222 6 35 chr2 6108944 6109137 -247147446 + L1M4 LINE L1 3590 3777 -2369 23 68 0 0 chr2 6109200 6109244 -247147339 + AT_rich Low_complexity Low_complexity 1 44 0 39 50 0 0 chr2 6109326 6109386 -247147197 + AT_rich Low_complexity Low_complexity 1 60 0 259 312 149 7 chr2 6109863 6110004 -247146579 - MER117 DNA MER1_type -35 162 2 2264 109 3 0 chr2 6110403 6110715 -247145868 + AluSp SINE Alu 1 313 0 931 270 48 42 chr2 6111306 6111788 -247144795 - HAL1 LINE L1 -121 2386 1902 418 314 63 20 chr2 6111908 6112303 -247144280 - HAL1 LINE L1 -1045 1462 1051 516 248 51 0 chr2 6112311 6112448 -247144135 - HAL1 LINE L1 -2313 194 51 631 266 77 10 chr2 6113530 6113827 -247142756 + Looper DNA T2_type 1 317 -1241 1174 164 10 0 chr2 6113849 6114057 -247142526 + MER2 DNA MER2_type 2 211 -134 3231 108 15 5 chr2 6114138 6114156 -247142427 - L1PA8A LINE L1 -389 5742 5726 297 0 0 0 chr2 6114156 6114189 -247142394 + (TG)n Simple_repeat Simple_repeat 2 34 0 3231 108 15 5 chr2 6114189 6115058 -247141525 - L1PA8A LINE L1 -405 5726 4848 2625 98 0 10 chr2 6115054 6115443 -247141140 + L1PA8A LINE L1 5719 6103 -28 * 221 30 61 0 chr2 6115449 6115482 -247141101 + A-rich Low_complexity Low_complexity 1 35 0 345 135 58 19 chr2 6115482 6115586 -247140997 + Looper DNA T2_type 1373 1480 -78 2465 55 0 13 chr2 6116070 6116382 -247140201 + AluY SINE Alu 1 308 -3 2262 117 0 3 chr2 6117347 6117656 -247138927 - AluSc SINE Alu -1 308 1 497 297 95 54 chr2 6118616 6119175 -247137408 - L2 LINE L2 -13 3300 2702 1105 107 0 47 chr2 6119184 6119353 -247137230 - AluSg SINE Alu -30 280 120 201 74 0 0 chr2 6119356 6119383 -247137200 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 1033 92 0 0 chr2 6119385 6119516 -247137067 - AluSg SINE Alu -179 131 1 1181 285 203 65 chr2 6119516 6121120 -247135463 - L2 LINE L2 -599 2715 891 881 289 90 18 chr2 6122102 6122603 -247133980 + L1MCc LINE L1 861 1397 -5026 532 300 73 45 chr2 6122607 6123101 -247133482 + L1MCc LINE L1 1406 1913 -5028 231 282 35 0 chr2 6123150 6123324 -247133259 + L1MCc LINE L1 2814 2993 -4129 336 117 36 108 chr2 6123383 6123494 -247133089 - L1MA9 LINE L1 -2 6310 6208 * 871 160 46 16 chr2 6123490 6123637 -247132946 + L1MA9 LINE L1 5632 5788 -524 204 40 0 0 chr2 6123637 6123662 -247132921 + (TG)n Simple_repeat Simple_repeat 2 26 0 871 160 46 16 chr2 6123662 6123708 -247132875 + L1MA9 LINE L1 5788 5831 -481 757 152 25 7 chr2 6123710 6123873 -247132710 + L1MA9 LINE L1 5775 5946 -243 3670 197 92 42 chr2 6124002 6124277 -247132306 + L1MC3 LINE L1 6591 6851 -934 189 0 0 0 chr2 6124277 6124298 -247132285 + (CA)n Simple_repeat Simple_repeat 1 21 0 3670 197 92 42 chr2 6124298 6124319 -247132264 + L1MC3 LINE L1 6851 6869 -916 3169 148 25 17 chr2 6124319 6124841 -247131742 + MER1A DNA MER1_type 2 527 0 3670 197 92 42 chr2 6124841 6125681 -247130902 + L1MC3 LINE L1 6869 7785 0 1667 260 59 47 chr2 6125700 6126744 -247129839 + L1MCc LINE L1 3167 4223 -2718 332 319 17 9 chr2 6126956 6127072 -247129511 - MIR3 SINE MIR -18 190 74 500 160 15 15 chr2 6127166 6127297 -247129286 + CT-rich Low_complexity Low_complexity 1 131 0 2288 109 3 0 chr2 6128616 6128928 -247127655 - AluSp SINE Alu 0 313 1 342 224 14 46 chr2 6129682 6130037 -247126546 + GA-rich Low_complexity Low_complexity 1 343 0 677 186 30 9 chr2 6130054 6130392 -247126191 + GA-rich Low_complexity Low_complexity 1 345 0 21 36 0 0 chr2 6131393 6131421 -247125162 + AT_rich Low_complexity Low_complexity 1 28 0 2253 104 3 0 chr2 6131484 6131781 -247124802 + AluSx SINE Alu 1 298 -14 267 327 65 42 chr2 6131983 6132151 -247124432 - MER5A DNA MER1_type -1 188 17 329 336 50 0 chr2 6132406 6132525 -247124058 + MIR3 SINE MIR 49 173 -35 260 235 20 10 chr2 6133446 6133501 -247123082 + (TA)n Simple_repeat Simple_repeat 1 59 -40 2244 116 0 3 chr2 6133501 6133811 -247122772 - AluSg SINE Alu -1 309 1 260 235 20 10 chr2 6133811 6133853 -247122730 + (TA)n Simple_repeat Simple_repeat 59 99 0 193 200 30 140 chr2 6134046 6134146 -247122437 + L2 LINE L2 2994 3082 -190 392 335 90 75 chr2 6134319 6134775 -247121808 - L2 LINE L2 0 3313 2851 810 330 216 19 chr2 6135002 6136154 -247120429 - L2 LINE L2 -1027 2287 791 541 195 81 0 chr2 6136154 6136277 -247120306 + FLAM_A SINE Alu 1 133 0 810 330 216 19 chr2 6136277 6136572 -247120011 - L2 LINE L2 -2523 791 555 25 0 0 0 chr2 6136618 6136643 -247119940 + AT_rich Low_complexity Low_complexity 1 25 0 2488 64 0 0 chr2 6136743 6137041 -247119542 + AluY SINE Alu 1 298 -13 316 360 39 39 chr2 6137345 6137603 -247118980 - L2 LINE L2 -189 3083 2826 302 280 16 40 chr2 6139063 6139188 -247117395 - L1ME3A LINE L1 -3 6167 6046 2002 163 7 0 chr2 6139378 6139684 -247116899 - AluSx SINE Alu -4 308 1 4422 154 54 71 chr2 6140045 6141134 -247115449 + MER11C LTR ERVK 1 1071 0 1278 200 71 26 chr2 6141517 6141894 -247114689 - L1MC2 LINE L1 -2 7772 6148 1115 134 41 0 chr2 6141898 6142069 -247114514 - AluSg/x SINE Alu -1 311 134 2256 110 3 0 chr2 6142069 6142361 -247114222 - AluSp SINE Alu -15 298 6 3627 181 63 94 chr2 6142361 6143496 -247113087 - L1MC3 LINE L1 -380 7405 6306 256 325 144 8 chr2 6143796 6143931 -247112652 + MIR SINE MIR 11 159 -57 1520 178 90 26 chr2 6143946 6144289 -247112294 - MLT1A1 LTR MaLR 0 365 1 183 205 0 0 chr2 6145709 6145748 -247110835 + T-rich Low_complexity Low_complexity 1 39 0 854 190 13 0 chr2 6146193 6146351 -247110232 + FRAM SINE Alu 1 160 -6 219 241 35 58 chr2 6146506 6146593 -247109990 + MIR SINE MIR 56 140 -122 307 262 71 0 chr2 6146698 6146782 -247109801 - L1MC4 LINE L1 -1339 6703 6614 * 310 256 49 0 chr2 6146733 6146815 -247109768 + L1MC4 LINE L1 6617 6702 -1340 225 218 23 23 chr2 6146819 6146906 -247109677 - L1MC4 LINE L1 -1342 6700 6614 237 139 0 0 chr2 6146909 6146952 -247109631 + (TA)n Simple_repeat Simple_repeat 1 43 0 186 269 60 45 chr2 6147199 6147266 -247109317 + L2 LINE L2 3246 3313 0 269 186 14 0 chr2 6148030 6148100 -247108483 + (CATA)n Simple_repeat Simple_repeat 2 72 0 29 28 0 0 chr2 6148203 6148239 -247108344 + AT_rich Low_complexity Low_complexity 1 36 0 484 139 0 0 chr2 6148428 6148500 -247108083 + AluS SINE Alu 228 299 -13 199 354 101 69 chr2 6148772 6149238 -247107345 - L2 LINE L2 -2417 897 417 216 111 0 0 chr2 6149834 6149870 -247106713 + (CA)n Simple_repeat Simple_repeat 1 36 0 189 0 0 0 chr2 6149885 6149906 -247106677 + (CCA)n Simple_repeat Simple_repeat 1 21 0 1202 248 103 7 chr2 6150053 6150469 -247106114 + MLT1C LTR MaLR 6 461 -6 234 305 184 29 chr2 6151282 6151456 -247105127 + MIR SINE MIR 1 201 -61 735 282 53 18 chr2 6152358 6152585 -247103998 - MIR SINE MIR -13 249 15 1272 208 0 4 chr2 6153238 6153510 -247103073 - AluJb SINE Alu 0 312 42 251 270 11 45 chr2 6153868 6154046 -247102537 + (ATAAG)n Simple_repeat Simple_repeat 5 176 0 27 29 0 0 chr2 6154585 6154619 -247101964 + AT_rich Low_complexity Low_complexity 1 34 0 235 334 99 60 chr2 6154904 6155257 -247101326 + L2 LINE L2 2906 3272 0 826 263 134 26 chr2 6155764 6156114 -247100469 + MLT1B LTR MaLR 3 390 0 1406 123 53 53 chr2 6157167 6157485 -247099098 - THE1C LTR MaLR -57 318 1 28 29 0 0 chr2 6157525 6157560 -247099023 + AT_rich Low_complexity Low_complexity 1 35 0 197 139 23 0 chr2 6157560 6157603 -247098980 + (CATATA)n Simple_repeat Simple_repeat 3 46 0 209 346 75 9 chr2 6158892 6159021 -247097562 + MIR SINE MIR 20 140 -68 208 356 67 34 chr2 6159165 6159314 -247097269 - MIR SINE MIR -95 167 14 216 280 60 40 chr2 6161062 6161162 -247095421 + MIR SINE MIR 20 121 -141 256 361 69 0 chr2 6161223 6161353 -247095230 - L2 LINE L2 0 3313 3175 238 261 0 0 chr2 6161365 6161411 -247095172 + L2 LINE L2 3209 3254 -18 227 221 174 0 chr2 6161834 6161920 -247094663 - MIR SINE MIR -71 191 91 288 324 15 7 chr2 6161971 6162107 -247094476 - LTR67 LTR ERVL -27 530 394 285 278 11 33 chr2 6163622 6163712 -247092871 + L2 LINE L2 3220 3307 -6 367 308 159 0 chr2 6164379 6164574 -247092009 - MIR SINE MIR -26 236 11 194 316 71 10 chr2 6165470 6165568 -247091015 - MIR SINE MIR -55 153 50 238 344 0 0 chr2 6165782 6165846 -247090737 + MIR SINE MIR 83 146 -62 1565 182 100 9 chr2 6165854 6166183 -247090400 - MLT1A1 LTR MaLR -6 359 1 1185 219 149 10 chr2 6166219 6166520 -247090063 - MER2 DNA MER2_type -1 343 1 21 0 0 0 chr2 6167893 6167914 -247088669 + AT_rich Low_complexity Low_complexity 1 21 0 291 266 21 0 chr2 6167930 6168024 -247088559 + MER3 DNA MER1_type 1 96 -113 1525 246 47 30 chr2 6168030 6168497 -247088086 + L1MA9 LINE L1 5798 6272 -40 300 240 52 10 chr2 6168505 6168601 -247087982 + MER3 DNA MER1_type 99 198 -11 3624 152 0 26 chr2 6168734 6169275 -247087308 + MER1A DNA MER1_type 1 527 0 234 318 106 20 chr2 6169300 6169545 -247087038 + HAL1b LINE L1 306 571 -777 231 226 70 26 chr2 6169607 6169722 -247086861 + HAL1b LINE L1 678 797 -551 30 59 0 0 chr2 6170035 6170086 -247086497 + AT_rich Low_complexity Low_complexity 1 51 0 23 54 0 0 chr2 6170093 6170130 -247086453 + AT_rich Low_complexity Low_complexity 1 37 0 1732 133 42 52 chr2 6170836 6171145 -247085438 + AluSx SINE Alu 1 306 -6 1727 199 21 57 chr2 6171207 6171400 -247085183 + MLT1A2 LTR MaLR 1 175 -199 357 43 0 0 chr2 6171400 6171447 -247085136 + (TC)n Simple_repeat Simple_repeat 2 48 0 1727 199 21 57 chr2 6171447 6171641 -247084942 + MLT1A2 LTR MaLR 175 374 0 306 362 54 0 chr2 6171658 6171807 -247084776 + L1MC4a LINE L1 4736 4892 -1254 1144 312 62 18 chr2 6172201 6172858 -247083725 + L1MC4a LINE L1 5256 5941 -1867 24 32 0 0 chr2 6173050 6173081 -247083502 + AT_rich Low_complexity Low_complexity 1 31 0 229 359 26 0 chr2 6173359 6173437 -247083146 + MIR SINE MIR 2 81 -181 389 261 7 0 chr2 6174482 6174635 -247081948 + (TG)n Simple_repeat Simple_repeat 2 155 0 1828 125 53 11 chr2 6174824 6175105 -247081478 + AluSx SINE Alu 1 293 -19 225 0 0 0 chr2 6175188 6175213 -247081370 + (TC)n Simple_repeat Simple_repeat 2 26 0 184 306 83 9 chr2 6175623 6175731 -247080852 + MIR SINE MIR 23 138 -124 397 282 75 27 chr2 6175758 6175959 -247080624 - MIR SINE MIR -27 235 25 182 239 22 0 chr2 6176133 6176179 -247080404 - L3b LINE CR1 -9 1574 1528 375 343 66 24 chr2 6176504 6176717 -247079866 - MIR SINE MIR -32 230 9 528 122 8 98 chr2 6176915 6177038 -247079545 - L1PB2 LINE L1 -4 6147 6036 296 290 90 80 chr2 6177156 6177312 -247079271 - MIR SINE MIR -2 260 100 1344 202 10 50 chr2 6177312 6177653 -247078930 + AluJb SINE Alu 1 312 0 296 290 90 80 chr2 6177653 6177696 -247078887 - MIR SINE MIR -162 100 59 3822 157 11 5 chr2 6177930 6178542 -247078041 - L1PA15 LINE L1 -2 6163 5548 28 0 0 0 chr2 6178581 6178609 -247077974 + AT_rich Low_complexity Low_complexity 1 28 0 1852 145 78 31 chr2 6179944 6180302 -247076281 + THE1C LTR MaLR 1 375 0 8726 127 115 3 chr2 6180304 6181718 -247074865 + THE1C-int LTR MaLR 3 1575 -5 1772 152 45 73 chr2 6181727 6182109 -247074474 + THE1C LTR MaLR 5 375 0 311 328 101 0 chr2 6182493 6182612 -247073971 - L2 LINE L2 -7 3306 3176 1507 189 10 34 chr2 6182650 6182946 -247073637 - AluJo SINE Alu -23 289 1 500 240 0 0 chr2 6184269 6184369 -247072214 + MER63 DNA MER1_type 27 752 -84 335 241 25 0 chr2 6184370 6184449 -247072134 + MER63 DNA MER1_type 978 1058 -2 481 270 16 0 chr2 6185051 6185177 -247071406 - L3b LINE CR1 -331 1252 1125 217 344 56 38 chr2 6185367 6185414 -247071169 - MIR3 SINE MIR -7 201 156 2504 67 0 3 chr2 6185414 6185726 -247070857 + AluY SINE Alu 1 311 0 217 344 56 38 chr2 6185726 6185838 -247070745 - MIR3 SINE MIR -52 156 39 186 280 54 21 chr2 6185964 6186057 -247070526 + L2 LINE L2 3206 3301 -12 236 62 0 0 chr2 6188565 6188597 -247067986 + HSMAR1 DNA Mariner 3 34 -1253 2294 95 0 20 chr2 6188768 6189073 -247067510 - AluSg SINE Alu -7 303 5 219 88 0 0 chr2 6190587 6190621 -247065962 + (GA)n Simple_repeat Simple_repeat 1 34 0 586 299 88 75 chr2 6190718 6191160 -247065423 + MLT1J2 LTR MaLR 1 448 -2 520 288 73 10 chr2 6191317 6191522 -247065061 - MIR SINE MIR -37 225 8 757 148 26 9 chr2 6191923 6192038 -247064545 + FLAM_C SINE Alu 12 128 -15 205 364 156 0 chr2 6192501 6192655 -247063928 - MIR SINE MIR -12 250 73 303 313 56 17 chr2 6193121 6193300 -247063283 + MIR SINE MIR 54 239 -23 33 43 0 0 chr2 6195392 6195439 -247061144 + AT_rich Low_complexity Low_complexity 1 47 0 2651 149 2 7 chr2 6196962 6197369 -247059214 + MSTA LTR MaLR 1 405 -23 1486 121 36 9 chr2 6197369 6197593 -247058990 - MER30 DNA MER1_type 0 230 1 224 227 0 0 chr2 6197624 6197668 -247058915 + (CATA)n Simple_repeat Simple_repeat 1 44 0 302 298 36 79 chr2 6198559 6198651 -247057932 - L1M4 LINE L1 -3775 2371 2277 2308 104 7 0 chr2 6198651 6198949 -247057634 - AluSp SINE Alu -13 300 1 302 298 36 79 chr2 6198949 6199108 -247057475 - L1M4 LINE L1 -3869 2277 2131 287 164 16 0 chr2 6199601 6199662 -247056921 + (TA)n Simple_repeat Simple_repeat 1 62 0 203 369 8 8 chr2 6203265 6203387 -247053196 + (TG)n Simple_repeat Simple_repeat 1 122 0 302 347 52 6 chr2 6203744 6203917 -247052666 + MIR3 SINE MIR 5 185 -23 516 186 12 0 chr2 6204906 6204992 -247051591 - FLAM_C SINE Alu -36 107 21 344 204 54 21 chr2 6205111 6205204 -247051379 - Charlie7 DNA MER1_type -2455 157 62 2204 109 6 13 chr2 6205390 6205523 -247051060 + AluSg SINE Alu 1 133 -177 2151 104 0 13 chr2 6205523 6205858 -247050725 + AluSx SINE Alu 3 312 0 2204 109 6 13 chr2 6205858 6206035 -247050548 + AluSg SINE Alu 133 309 -1 3109 123 12 6 chr2 6206156 6206637 -247049946 - L1PA13 LINE L1 -415 5746 5263 2736 125 39 2 chr2 6206637 6207033 -247049550 + L1PA13 LINE L1 5739 6160 -3 467 236 51 97 chr2 6207098 6207293 -247049290 - MIR SINE MIR -10 252 67 358 309 86 6 chr2 6207918 6208093 -247048490 + MIR SINE MIR 49 237 -25 185 163 0 82 chr2 6208483 6208532 -247048051 - L3b LINE CR1 -13 1570 1526 1718 212 57 5 chr2 6208671 6209039 -247047544 + MLT1B LTR MaLR 3 389 -1 185 323 83 53 chr2 6209596 6209729 -247046854 + MIR SINE MIR 117 253 -9 511 278 88 32 chr2 6211191 6211407 -247045176 - MIR SINE MIR -21 241 14 205 313 101 10 chr2 6211703 6211802 -247044781 + MIR SINE MIR 40 147 -115 242 379 0 0 chr2 6211947 6212042 -247044541 + MLT1G1 LTR MaLR 431 525 -70 1288 198 62 35 chr2 6212043 6212154 -247044429 + AluJo SINE Alu 4 110 -202 2261 134 19 43 chr2 6212154 6212527 -247044056 - THE1B LTR MaLR 0 364 1 1288 198 62 35 chr2 6212527 6212703 -247043880 + AluJo SINE Alu 110 299 -13 2156 117 19 3 chr2 6212983 6213308 -247043275 - Tigger3b DNA MER2_type -564 667 338 233 87 0 0 chr2 6213323 6213369 -247043214 - LTR66 LTR ERVL -171 439 394 239 211 9 28 chr2 6213377 6213486 -247043097 + (TA)n Simple_repeat Simple_repeat 2 108 0 565 158 0 10 chr2 6213486 6213587 -247042996 - Tigger3b DNA MER2_type -902 329 230 3069 196 59 6 chr2 6214487 6215150 -247041433 - L1MC2 LINE L1 0 6344 5647 21 0 0 0 chr2 6215248 6215269 -247041314 + AT_rich Low_complexity Low_complexity 1 21 0 710 191 111 5 chr2 6215800 6215989 -247040594 + L1MD3 LINE L1 6906 7114 -881 607 235 96 24 chr2 6215994 6216160 -247040423 + MER45A DNA AcHobo 1 178 0 376 323 16 8 chr2 6216172 6216299 -247040284 - MER5A DNA MER1_type -51 138 11 413 309 74 67 chr2 6216649 6217070 -247039513 + L1MEc LINE L1 2099 2500 -3715 1769 181 0 0 chr2 6217070 6217376 -247039207 + AluSx SINE Alu 1 306 0 413 309 74 67 chr2 6217376 6217545 -247039038 + L1MEc LINE L1 2500 2666 -3549 2442 125 43 14 chr2 6218818 6219170 -247037413 - THE1B LTR MaLR 0 364 3 12286 100 11 0 chr2 6219172 6220734 -247035849 - THE1B-int LTR MaLR 0 1580 2 2481 137 31 14 chr2 6220735 6221093 -247035490 - THE1B LTR MaLR 0 364 1 22 56 0 0 chr2 6221099 6221135 -247035448 + AT_rich Low_complexity Low_complexity 1 36 0 1897 146 13 23 chr2 6223098 6223400 -247033183 - AluJo SINE Alu -13 299 1 1981 139 4 0 chr2 6223446 6223766 -247032817 + AluSx SINE Alu 1 321 0 234 116 0 0 chr2 6226099 6226142 -247030441 + (T)n Simple_repeat Simple_repeat 1 43 0 323 275 44 0 chr2 6226441 6226532 -247030051 - MIR SINE MIR -62 146 52 317 301 82 35 chr2 6226759 6227075 -247029508 + L1ME LINE L1 5352 5682 -439 467 295 45 54 chr2 6227189 6227413 -247029170 + MIR SINE MIR 14 235 -27 235 188 104 0 chr2 6227846 6227894 -247028689 + L2 LINE L2 3256 3308 -5 1754 182 3 0 chr2 6227916 6228207 -247028376 + AluJb SINE Alu 12 303 -9 5029 68 0 0 chr2 6228333 6228923 -247027660 + LTR10C LTR ERV1 1 590 -1 1767 132 81 45 chr2 6229137 6229494 -247027089 - THE1C LTR MaLR 0 375 6 2080 120 3 30 chr2 6230023 6230322 -247026261 + AluSx SINE Alu 1 291 -21 10114 245 26 29 chr2 6231375 6231556 -247025027 + L1PA16 LINE L1 1983 2163 -4686 2037 151 3 0 chr2 6231556 6231868 -247024715 + AluSp SINE Alu 1 313 0 10114 245 26 29 chr2 6231868 6233322 -247023261 + L1PA16 LINE L1 2163 3620 -3229 2146 100 10 32 chr2 6233322 6233632 -247022951 + AluSq SINE Alu 1 303 -10 10114 245 26 29 chr2 6233632 6234348 -247022235 + L1PA16 LINE L1 3620 4337 -2512 261 0 0 0 chr2 6234348 6234377 -247022206 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 10114 245 26 29 chr2 6234377 6236188 -247020395 + L1PA16 LINE L1 4337 6033 -816 404 167 14 14 chr2 6236188 6236260 -247020323 + AluJ/FRAM SINE Alu 217 288 -24 23 0 0 0 chr2 6236260 6236283 -247020300 + AT_rich Low_complexity Low_complexity 1 23 0 2560 156 53 3 chr2 6236284 6237021 -247019562 + L1PA16 LINE L1 6025 6849 -20 22 70 0 0 chr2 6237244 6237287 -247019296 + AT_rich Low_complexity Low_complexity 1 43 0 300 346 88 16 chr2 6238506 6238688 -247017895 + L2 LINE L2 3078 3272 0 227 227 0 0 chr2 6239465 6239509 -247017074 - L3 LINE CR1 -7 1570 1527 2232 109 3 0 chr2 6239714 6240007 -247016576 - AluSg SINE Alu -16 294 1 243 281 92 59 chr2 6240047 6240200 -247016383 - MIR3 SINE MIR -48 160 3 626 276 119 16 chr2 6240258 6240501 -247016082 + MLT1J LTR MaLR 1 268 -243 339 65 0 0 chr2 6240680 6240726 -247015857 + (TTTTA)n Simple_repeat Simple_repeat 1 46 0 27671 82 8 5 chr2 6240726 6245313 -247011270 - L1PA6 LINE L1 -24 6130 1532 35016 85 4 12 chr2 6245447 6250374 -247006209 - L1P2 LINE L1 -683 5471 591 1437 228 83 41 chr2 6250614 6251049 -247005534 + MLT1C LTR MaLR 8 460 -7 2054 168 90 30 chr2 6251376 6251776 -247004807 - MSTA LTR MaLR -4 424 1 319 253 183 84 chr2 6252173 6252375 -247004208 + MLT1J LTR MaLR 129 350 -161 3416 66 49 5 chr2 6252638 6253063 -247003520 - MLT2A1 LTR ERVL 0 444 1 266 309 57 16 chr2 6253263 6253457 -247003126 + L1ME4a LINE L1 5714 5915 -206 1873 102 4 8 chr2 6253468 6253724 -247002859 - AluSp SINE Alu -19 294 40 373 246 58 108 chr2 6254217 6254542 -247002041 + MER5C DNA MER1_type 14 322 -2 232 293 198 17 chr2 6255866 6255982 -247000601 - MIR SINE MIR -75 187 51 433 329 89 25 chr2 6256376 6256780 -246999803 - LTR16A LTR ERVL -13 437 8 1279 108 104 68 chr2 6257194 6257279 -246999304 - MER30 DNA MER1_type 0 230 150 2108 125 3 3 chr2 6257279 6257575 -246999008 - AluSc SINE Alu -13 296 1 1279 108 104 68 chr2 6257575 6257711 -246998872 - MER30 DNA MER1_type -80 150 1 185 373 27 9 chr2 6259584 6259694 -246996889 - MIR SINE MIR -85 177 66 589 289 17 6 chr2 6259958 6260131 -246996452 - MER5B DNA MER1_type -1 177 3 217 283 17 17 chr2 6260182 6260242 -246996341 - MER5A DNA MER1_type -16 173 114 440 360 47 64 chr2 6260493 6260965 -246995618 - L2 LINE L2 -1809 1505 1042 347 265 27 13 chr2 6261057 6261195 -246995388 + MLT1I LTR MaLR 73 181 -228 1008 269 88 7 chr2 6262052 6262168 -246994415 + MLT1A2 LTR MaLR 42 147 -227 252 0 0 0 chr2 6262168 6262196 -246994387 + (TG)n Simple_repeat Simple_repeat 1 28 0 1008 269 88 7 chr2 6262196 6262387 -246994196 + MLT1A2 LTR MaLR 147 374 0 218 114 0 23 chr2 6263289 6263333 -246993250 + (TC)n Simple_repeat Simple_repeat 2 44 0 198 0 0 0 chr2 6263333 6263355 -246993228 + (CA)n Simple_repeat Simple_repeat 1 22 0 393 264 155 29 chr2 6264429 6264630 -246991953 + MIR SINE MIR 3 213 -49 195 42 0 0 chr2 6264663 6264687 -246991896 + (TCTG)n Simple_repeat Simple_repeat 3 26 0 801 31 0 0 chr2 6264688 6264784 -246991799 + (TCTA)n Simple_repeat Simple_repeat 4 99 0 302 67 22 0 chr2 6265073 6265118 -246991465 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 202 367 93 4 chr2 6265145 6265423 -246991160 + L3 LINE CR1 1128 1430 -147 438 318 42 42 chr2 6267700 6267936 -246988647 + MIR SINE MIR 21 256 -6 1320 88 0 0 chr2 6268298 6268468 -246988115 + AluY SINE Alu 126 295 -16 187 296 74 0 chr2 6269470 6269524 -246987059 - MER5B DNA MER1_type 0 178 121 38 22 0 0 chr2 6269967 6270012 -246986571 + AT_rich Low_complexity Low_complexity 1 45 0 2254 118 0 0 chr2 6270012 6270316 -246986267 + AluSc SINE Alu 3 306 -3 234 292 119 64 chr2 6270924 6271143 -246985440 + MIR SINE MIR 13 243 -19 793 219 39 0 chr2 6271415 6271620 -246984963 + L1MD2 LINE L1 5656 5868 -491 2299 95 0 0 chr2 6272564 6272870 -246983713 + AluY SINE Alu 1 306 -5 2079 90 62 3 chr2 6272906 6273195 -246983388 + AluSq SINE Alu 1 306 -7 394 274 15 22 chr2 6274738 6274873 -246981710 - MER94 DNA DNA 0 134 1 451 235 76 0 chr2 6275131 6275263 -246981320 - MER63 DNA MER1_type -276 786 19 12131 162 56 9 chr2 6276020 6278329 -246978254 - Tigger1 DNA MER2_type 0 2418 3 366 309 53 33 chr2 6278380 6278653 -246977930 - L1ME2 LINE L1 -4 6162 5879 1368 263 85 48 chr2 6278756 6279080 -246977503 - L1ME2 LINE L1 -277 5889 5578 2103 94 10 39 chr2 6279080 6279387 -246977196 - AluSg SINE Alu -11 299 2 1368 263 85 48 chr2 6279387 6280777 -246975806 - L1ME2 LINE L1 -588 5578 4124 26 0 0 0 chr2 6280795 6280821 -246975762 + AT_rich Low_complexity Low_complexity 1 26 0 293 274 105 0 chr2 6280821 6280945 -246975638 - L1ME2 LINE L1 -2210 3936 3800 22 70 0 0 chr2 6280974 6281017 -246975566 + AT_rich Low_complexity Low_complexity 1 43 0 29 60 0 0 chr2 6281422 6281472 -246975111 + AT_rich Low_complexity Low_complexity 1 50 0 442 177 14 34 chr2 6282069 6282216 -246974367 + CT-rich Low_complexity Low_complexity 1 144 0 820 126 6 27 chr2 6282216 6282399 -246974184 + (TTTC)n Simple_repeat Simple_repeat 1 179 0 296 297 7 83 chr2 6282896 6283041 -246973542 + MIR SINE MIR 47 180 -82 408 348 45 8 chr2 6283114 6283361 -246973222 + LTR16A LTR ERVL 56 311 -139 237 65 0 0 chr2 6283366 6283397 -246973186 + (CTTG)n Simple_repeat Simple_repeat 2 32 0 1768 147 53 3 chr2 6283400 6283685 -246972898 - AluSx SINE Alu -13 299 1 212 186 17 0 chr2 6284691 6284750 -246971833 + CT-rich Low_complexity Low_complexity 1 60 0 2184 132 6 0 chr2 6285173 6285484 -246971099 + AluSq SINE Alu 1 313 0 979 232 31 37 chr2 6285902 6286229 -246970354 - L1MB8 LINE L1 0 6178 5854 184 360 0 0 chr2 6286878 6286928 -246969655 + L2 LINE L2 3206 3255 -17 501 135 0 0 chr2 6286931 6287020 -246969563 + (GGAA)n Simple_repeat Simple_repeat 4 92 0 210 139 0 70 chr2 6287020 6287063 -246969520 + (GGGGA)n Simple_repeat Simple_repeat 5 44 0 186 208 0 0 chr2 6287625 6287673 -246968910 + (TA)n Simple_repeat Simple_repeat 1 48 0 189 234 31 62 chr2 6288601 6288665 -246967918 - L2 LINE L2 -11 3302 3241 444 330 62 20 chr2 6288702 6288919 -246967664 - MIR SINE MIR -1 261 37 3808 79 119 0 chr2 6290788 6290941 -246965642 - LTR66 LTR ERVL 0 610 477 327 113 0 0 chr2 6290941 6291003 -246965580 + (TA)n Simple_repeat Simple_repeat 2 63 0 3808 79 119 0 chr2 6291003 6291394 -246965189 - LTR66 LTR ERVL -133 477 1 27 0 0 0 chr2 6292235 6292262 -246964321 + AT_rich Low_complexity Low_complexity 1 27 0 226 294 43 22 chr2 6292601 6292693 -246963890 - MIR3 SINE MIR -6 202 109 27 29 0 0 chr2 6293056 6293090 -246963493 + AT_rich Low_complexity Low_complexity 1 34 0 1922 147 0 0 chr2 6293644 6293929 -246962654 + AluSg SINE Alu 1 285 -25 355 224 129 20 chr2 6293978 6294125 -246962458 + L1MDb LINE L1 1178 1340 -5069 5575 168 24 45 chr2 6295800 6297054 -246959529 - Tigger3b DNA MER2_type -3 1228 1 402 306 80 55 chr2 6298123 6298521 -246958062 + L2 LINE L2 1901 2308 -1006 895 229 89 50 chr2 6298867 6299225 -246957358 - MLT1A2 LTR MaLR -2 372 1 731 196 7 0 chr2 6300451 6300589 -246955994 - AluJb SINE Alu 0 312 174 2449 231 63 13 chr2 6300716 6301237 -246955346 - L1MB7 LINE L1 -101 6083 5590 2425 71 0 10 chr2 6301237 6301548 -246955035 - AluY SINE Alu -3 308 1 2449 231 63 13 chr2 6301548 6302275 -246954308 - L1MB7 LINE L1 -594 5590 4786 710 207 27 0 chr2 6302275 6302425 -246954158 - MLT1A1 LTR MaLR 0 365 212 1279 173 38 114 chr2 6302608 6302834 -246953749 + MLT1B LTR MaLR 1 182 -208 2060 139 0 3 chr2 6302834 6303137 -246953446 + AluSx SINE Alu 2 303 -9 1279 173 38 114 chr2 6303137 6303332 -246953251 + MLT1B LTR MaLR 182 390 0 713 179 20 4 chr2 6303851 6304107 -246952476 + (TG)n Simple_repeat Simple_repeat 1 260 0 2053 103 33 98 chr2 6306775 6306851 -246949732 - THE1B LTR MaLR 0 364 285 2075 127 14 0 chr2 6306851 6307142 -246949441 - AluSx SINE Alu -17 295 1 2053 103 33 98 chr2 6307142 6307454 -246949129 - THE1B LTR MaLR -79 285 1 265 286 53 85 chr2 6307547 6307714 -246948869 - MIR SINE MIR -27 235 73 1411 189 103 49 chr2 6307714 6308084 -246948499 - MLT1B LTR MaLR 0 390 1 265 286 53 85 chr2 6308084 6308105 -246948478 - MIR SINE MIR -189 73 53 213 298 53 0 chr2 6308318 6308375 -246948208 + MIR SINE MIR 1 60 -202 338 217 0 0 chr2 6308423 6308492 -246948091 - L2 LINE L2 -3 3310 3242 303 28 0 0 chr2 6309590 6309626 -246946957 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 2567 50 0 0 chr2 6309629 6309930 -246946653 - AluY SINE Alu -10 301 1 697 150 36 7 chr2 6310850 6310990 -246945593 + L1PA15 LINE L1 6021 6164 -1 341 282 103 5 chr2 6311033 6311246 -246945337 + HAL1b LINE L1 260 493 -855 227 276 20 0 chr2 6311424 6311522 -246945061 + (TA)n Simple_repeat Simple_repeat 2 101 0 258 32 0 0 chr2 6311570 6311601 -246944982 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2165 100 11 0 chr2 6311603 6311882 -246944701 - AluSq SINE Alu -28 285 4 1863 182 42 25 chr2 6311927 6312277 -246944306 - L1PB4 LINE L1 0 6156 5796 234 62 0 0 chr2 6312277 6312309 -246944274 + (TG)n Simple_repeat Simple_repeat 2 33 0 1863 182 42 25 chr2 6312309 6312391 -246944192 - L1PB4 LINE L1 -360 5796 5717 225 65 0 0 chr2 6313100 6313131 -246943452 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 2223 116 0 7 chr2 6313200 6313510 -246943073 + AluSq SINE Alu 1 308 -5 259 337 37 37 chr2 6313805 6313992 -246942591 + MIR SINE MIR 71 257 -5 651 236 21 82 chr2 6316083 6316316 -246940267 + MLT1A1 LTR MaLR 1 219 -146 242 248 31 39 chr2 6318104 6318233 -246938350 - L1ME LINE L1 -202 5919 5792 231 88 0 0 chr2 6318254 6318288 -246938295 + (TG)n Simple_repeat Simple_repeat 2 35 0 531 299 55 10 chr2 6318768 6318977 -246937606 - MIR SINE MIR -29 233 17 383 37 0 19 chr2 6319194 6319248 -246937335 + (TG)n Simple_repeat Simple_repeat 2 54 0 2239 96 33 7 chr2 6320340 6320642 -246935941 + AluSg SINE Alu 1 310 0 254 231 0 0 chr2 6320788 6320853 -246935730 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 1682 166 39 34 chr2 6321000 6321356 -246935227 - MLT1A1 LTR MaLR -7 358 1 793 176 0 0 chr2 6321357 6321505 -246935078 - L1MB1 LINE L1 -17 6151 6004 411 183 0 0 chr2 6321568 6321650 -246934933 + AluJ/FRAM SINE Alu 222 303 -9 199 383 8 39 chr2 6321948 6322076 -246934507 + L2 LINE L2 3148 3271 -1 744 171 8 0 chr2 6323004 6323127 -246933456 + FLAM_C SINE Alu 2 125 -8 274 371 61 0 chr2 6323279 6323411 -246933172 + MIR SINE MIR 53 192 -70 231 170 0 0 chr2 6323482 6323529 -246933054 + (TG)n Simple_repeat Simple_repeat 1 47 0 467 308 48 14 chr2 6323956 6324102 -246932481 + MER5B DNA MER1_type 28 178 0 193 296 14 28 chr2 6324179 6324250 -246932333 + L2 LINE L2 3194 3263 -9 1143 281 132 14 chr2 6324645 6325162 -246931421 - L2 LINE L2 -575 2739 2162 401 283 121 38 chr2 6325880 6326226 -246930357 + LTR16A1 LTR ERVL 71 445 -12 2270 108 7 0 chr2 6326376 6326683 -246929900 + AluSg SINE Alu 1 309 -1 1768 177 29 13 chr2 6327477 6327860 -246928723 + MLT2B1 LTR ERVL 2 436 -79 184 57 29 29 chr2 6327867 6327902 -246928681 + (TTATA)n Simple_repeat Simple_repeat 5 39 0 21 71 0 0 chr2 6328334 6328376 -246928207 + AT_rich Low_complexity Low_complexity 1 42 0 268 385 39 26 chr2 6330266 6330422 -246926161 + MIR SINE MIR 15 172 -90 2238 169 26 28 chr2 6331609 6332036 -246924547 + MSTB LTR MaLR 1 426 0 1093 232 14 21 chr2 6332106 6332386 -246924197 + MLT1A1 LTR MaLR 1 278 -87 2314 106 0 0 chr2 6332512 6332814 -246923769 + AluSx SINE Alu 1 302 -10 461 268 176 0 chr2 6332825 6332967 -246923616 - MER96 DNA MER1_type? -1 174 8 508 296 36 13 chr2 6333340 6333647 -246922936 + L1M4 LINE L1 3387 3700 -2446 235 138 0 52 chr2 6333662 6333720 -246922863 + (TA)n Simple_repeat Simple_repeat 1 55 0 560 247 71 61 chr2 6333729 6334025 -246922558 + L1M4 LINE L1 3719 4017 -2129 1721 161 32 7 chr2 6334121 6334424 -246922159 - AluJb SINE Alu 0 310 1 1684 242 138 9 chr2 6334541 6335236 -246921347 + L1M4 LINE L1 4493 5277 -869 6208 186 17 5 chr2 6335244 6337074 -246919509 + L1P5 LINE L1 3823 5679 -472 480 191 40 0 chr2 6337175 6337301 -246919282 + GA-rich Low_complexity Low_complexity 4 134 0 2100 122 0 7 chr2 6337423 6337718 -246918865 + AluSx SINE Alu 1 293 -19 5163 245 32 38 chr2 6338120 6339239 -246917344 + L1M4 LINE L1 20 1277 -5477 2084 131 0 0 chr2 6339239 6339541 -246917042 + AluSx SINE Alu 1 302 0 5163 245 32 38 chr2 6339541 6340183 -246916400 + L1M4 LINE L1 1277 1921 -4833 3621 230 111 67 chr2 6340215 6341647 -246914936 + L1MDa LINE L1 35 1542 -4998 1800 172 143 8 chr2 6341647 6342024 -246914559 - MSTA LTR MaLR 0 428 1 3621 230 111 67 chr2 6342024 6342140 -246914443 + L1MDa LINE L1 1542 1651 -4889 2310 270 54 46 chr2 6342171 6343869 -246912714 - L1PA12 LINE L1 -5608 1973 1 312 167 61 0 chr2 6343968 6344034 -246912549 - L1MDa LINE L1 -6436 104 35 23 0 0 0 chr2 6345917 6345940 -246910643 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 6346210 6346232 -246910351 + AT_rich Low_complexity Low_complexity 1 22 0 566 289 39 81 chr2 6347660 6347992 -246908591 + MLT1H LTR MaLR 37 354 -195 4064 215 42 82 chr2 6349909 6351414 -246905169 - Charlie1a DNA MER1_type -4 1451 6 214 306 145 40 chr2 6352553 6352677 -246903906 + L2 LINE L2 3136 3272 0 1882 256 49 18 chr2 6352976 6353479 -246903104 - L1 LINE L1 -2580 3566 3080 2046 147 86 18 chr2 6353479 6353874 -246902709 - MSTB LTR MaLR -4 422 1 1882 256 49 18 chr2 6353874 6354371 -246902212 - L1 LINE L1 -3066 3080 2498 1487 239 121 63 chr2 6354368 6354955 -246901628 - L1M4b LINE L1 -6219 640 20 * 379 335 107 5 chr2 6356914 6357120 -246899463 + MIR SINE MIR 31 257 -5 705 73 0 0 chr2 6357812 6357908 -246898675 + (TA)n Simple_repeat Simple_repeat 2 97 0 275 257 67 0 chr2 6358343 6358448 -246898135 + MARNA DNA Mariner 461 572 -14 23 68 0 0 chr2 6359038 6359082 -246897501 + AT_rich Low_complexity Low_complexity 1 44 0 23 33 0 0 chr2 6359546 6359576 -246897007 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr2 6359697 6359725 -246896858 + AT_rich Low_complexity Low_complexity 1 28 0 223 306 61 20 chr2 6359945 6360043 -246896540 - MIR SINE MIR -95 167 66 258 400 40 0 chr2 6361658 6361783 -246894800 - L2 LINE L2 -237 3035 2906 1270 187 239 16 chr2 6361847 6362227 -246894356 - MER31B LTR ERV1 -1 465 1 181 281 73 31 chr2 6362253 6362349 -246894234 - L2 LINE L2 -480 2834 2735 366 332 75 11 chr2 6363094 6363281 -246893302 + MIR SINE MIR 53 251 -11 212 175 25 0 chr2 6364104 6364144 -246892439 + CT-rich Low_complexity Low_complexity 1 41 0 210 208 75 0 chr2 6364864 6364917 -246891666 - MIR SINE MIR -142 120 64 194 333 25 37 chr2 6364953 6365034 -246891549 + MIR SINE MIR 63 142 -120 3779 113 53 14 chr2 6365266 6365947 -246890636 - L1MA3 LINE L1 0 6305 5643 4119 106 48 100 chr2 6365310 6365493 -246891090 - L1MA3 LINE L1 -44 6261 6070 269 68 23 0 chr2 6365493 6365537 -246891046 + (GTTTG)n Simple_repeat Simple_repeat 2 46 0 4119 106 48 100 chr2 6365537 6365947 -246890636 - L1MA3 LINE L1 -235 6070 5655 255 217 0 0 chr2 6365947 6366007 -246890576 + (CATATA)n Simple_repeat Simple_repeat 3 62 0 4119 106 48 100 chr2 6366007 6366146 -246890437 - L1MA3 LINE L1 -650 5655 5510 217 341 57 16 chr2 6366882 6367005 -246889578 + MIR SINE MIR 67 194 -68 1994 113 60 0 chr2 6367007 6367291 -246889292 + AluSx SINE Alu 1 301 -11 1473 190 10 14 chr2 6367571 6367860 -246888723 + AluJo SINE Alu 1 288 -24 30 45 0 0 chr2 6367860 6367904 -246888679 + AT_rich Low_complexity Low_complexity 1 44 0 203 240 93 40 chr2 6368048 6368123 -246888460 + L2 LINE L2 3234 3312 -1 186 103 0 0 chr2 6368173 6368202 -246888381 + (TG)n Simple_repeat Simple_repeat 2 30 0 2181 105 7 0 chr2 6368549 6368835 -246887748 + AluSx SINE Alu 1 288 -24 380 326 17 12 chr2 6370252 6370424 -246886159 - MLT1L LTR MaLR 0 615 443 359 258 75 0 chr2 6371999 6372092 -246884491 - MER45A DNA AcHobo -53 125 26 313 315 26 3 chr2 6372165 6372329 -246884254 + MIR SINE MIR 45 211 -51 2432 68 3 3 chr2 6372676 6372987 -246883596 + AluY SINE Alu 1 311 0 1807 161 39 86 chr2 6373005 6373389 -246883194 + MER47A DNA MER2_type 1 366 0 2132 110 0 0 chr2 6374177 6374485 -246882098 - AluY SINE Alu 0 308 1 33 0 0 0 chr2 6378053 6378086 -246878497 + AT_rich Low_complexity Low_complexity 1 33 0 182 333 48 0 chr2 6378221 6378284 -246878299 - MIR SINE MIR -119 143 78 2418 238 67 12 chr2 6378530 6379127 -246877456 - LTR27 LTR ERV1 0 636 7 1652 171 14 73 chr2 6379300 6379669 -246876914 - MLT1B LTR MaLR 0 390 44 278 250 0 0 chr2 6380182 6380242 -246876341 + MIR SINE MIR 87 146 -62 279 314 69 10 chr2 6380374 6380476 -246876107 - MIR SINE MIR -48 214 107 23 0 0 0 chr2 6382279 6382302 -246874281 + AT_rich Low_complexity Low_complexity 1 23 0 199 338 0 15 chr2 6384045 6384113 -246872470 - MIR SINE MIR -76 186 120 294 274 96 37 chr2 6386436 6386571 -246870012 + MIR3 SINE MIR 63 205 -3 333 315 19 9 chr2 6386755 6386863 -246869720 + L2 LINE L2 3154 3262 -51 241 47 156 16 chr2 6386916 6386980 -246869603 + (TTAAA)n Simple_repeat Simple_repeat 4 76 0 327 191 0 32 chr2 6387280 6387406 -246869177 + GA-rich Low_complexity Low_complexity 3 124 0 1465 191 28 3 chr2 6387429 6387712 -246868871 + AluJo SINE Alu 9 298 -14 809 51 5 82 chr2 6387747 6387942 -246868641 + (GGGAA)n Simple_repeat Simple_repeat 1 180 0 276 163 0 50 chr2 6387926 6388006 -246868577 + GA-rich Low_complexity Low_complexity 3 78 0 * 234 0 0 0 chr2 6388153 6388179 -246868404 + (TA)n Simple_repeat Simple_repeat 2 27 0 387 317 42 7 chr2 6389136 6389278 -246867305 + MIR SINE MIR 7 153 -109 2249 110 3 7 chr2 6392828 6393137 -246863446 - AluSq SINE Alu -5 308 1 693 290 157 34 chr2 6394603 6395010 -246861573 - LTR16B LTR ERVL -1 463 7 2384 138 119 8 chr2 6397457 6397842 -246858741 - MSTA LTR MaLR 0 428 1 439 331 82 5 chr2 6398013 6398197 -246858386 - L2 LINE L2 -163 3109 2912 259 150 33 0 chr2 6398222 6398282 -246858301 + CT-rich Low_complexity Low_complexity 3 64 0 1910 197 110 22 chr2 6398290 6398792 -246857791 - LTR10B LTR ERV1 -1 546 1 270 253 179 0 chr2 6398922 6399017 -246857566 - MLT1D LTR MaLR 0 505 394 370 313 96 34 chr2 6399342 6399894 -246856689 - L1ME3A LINE L1 -239 5931 5346 27 29 0 0 chr2 6400072 6400106 -246856477 + AT_rich Low_complexity Low_complexity 1 34 0 426 302 101 28 chr2 6400134 6400422 -246856161 - L1ME3A LINE L1 -1108 5038 4730 2260 113 0 0 chr2 6400448 6400749 -246855834 - AluSq SINE Alu -12 301 1 227 286 160 45 chr2 6400846 6401047 -246855536 + MIR SINE MIR 36 256 -6 21 0 0 0 chr2 6401122 6401143 -246855440 + AT_rich Low_complexity Low_complexity 1 21 0 202 321 136 31 chr2 6401690 6401852 -246854731 - MIR SINE MIR -6 256 78 1401 208 71 75 chr2 6401855 6402322 -246854261 - MLT1C LTR MaLR -2 465 1 345 47 0 0 chr2 6402333 6402376 -246854207 + (TG)n Simple_repeat Simple_repeat 2 44 0 398 336 39 50 chr2 6402540 6402799 -246853784 + L3 LINE CR1 836 1091 -486 225 245 43 43 chr2 6402799 6402893 -246853690 - MLT1J1 LTR MaLR 0 446 353 1585 211 38 30 chr2 6402904 6403274 -246853309 + MLT1A2 LTR MaLR 2 374 0 2494 67 3 0 chr2 6404606 6404906 -246851677 - AluY SINE Alu -10 301 1 262 279 38 13 chr2 6405316 6405395 -246851188 - MLT1G LTR MaLR -503 87 7 954 151 0 0 chr2 6405669 6405821 -246850762 + L1PBa LINE L1 3 154 -6709 430 176 12 0 chr2 6405887 6405972 -246850611 + L1PBa LINE L1 856 941 -5922 7316 208 17 3 chr2 6406064 6408191 -246848392 + L1PBa LINE L1 177 1644 -5219 227 88 29 0 chr2 6408191 6408225 -246848358 + MSTA LTR MaLR 1 35 -393 203 274 96 59 chr2 6408701 6408836 -246847747 + MER5B DNA MER1_type 5 144 -34 286 214 87 29 chr2 6408721 6408824 -246847759 - MER5A DNA MER1_type -22 167 59 2321 100 0 0 chr2 6409049 6409350 -246847233 + AluSx SINE Alu 1 301 -11 2807 145 59 11 chr2 6411159 6411684 -246844899 + Tigger3(Golem) DNA MER2_type 2478 3027 -2 328 202 16 57 chr2 6411684 6411807 -246844776 - Charlie2 DNA MER1_type -507 2355 2238 523 297 72 14 chr2 6411903 6412112 -246844471 - Charlie2 DNA MER1_type -2534 248 28 1877 207 71 7 chr2 6412580 6412985 -246843598 + MLT2C2 LTR ERVL 3 534 -20 361 244 47 0 chr2 6412995 6413081 -246843502 - L1MC4 LINE L1 -1339 6703 6614 302 183 0 17 chr2 6413052 6413112 -246843471 - L1MCa LINE L1 -4362 2064 2006 * 401 326 102 5 chr2 6413169 6413365 -246843218 + MIR SINE MIR 23 237 -25 265 137 63 105 chr2 6413936 6414031 -246842552 + L2 LINE L2 3117 3207 -106 344 229 0 0 chr2 6414509 6414579 -246842004 + MIR SINE MIR 86 155 -107 286 174 0 10 chr2 6414587 6414656 -246841927 - MLT2D LTR ERVL -2 412 367 738 209 10 19 chr2 6414656 6415074 -246841509 + (CATATA)n Simple_repeat Simple_repeat 1 414 0 225 231 0 0 chr2 6415074 6415126 -246841457 - L1MC4 LINE L1 -1343 6699 6648 585 173 27 0 chr2 6415128 6415278 -246841305 + (CATATA)n Simple_repeat Simple_repeat 4 157 0 2088 189 16 7 chr2 6415278 6415660 -246840923 - MLT2D LTR ERVL -40 480 1 1012 231 19 64 chr2 6417219 6417656 -246838927 + L1MA9 LINE L1 5861 6274 -38 281 26 26 0 chr2 6417738 6417776 -246838807 + (CA)n Simple_repeat Simple_repeat 2 40 0 1019 282 61 22 chr2 6418352 6418841 -246837742 - MLT1H LTR MaLR -41 508 1 307 282 34 8 chr2 6419286 6419403 -246837180 - MLT1I LTR MaLR 0 409 290 552 215 66 0 chr2 6419515 6419636 -246836947 + FLAM_A SINE Alu 1 129 -4 259 196 0 0 chr2 6421819 6421865 -246834718 + L2 LINE L2 3261 3306 -7 291 326 120 23 chr2 6421880 6422191 -246834392 - L2 LINE L2 -2 3270 2871 183 266 0 0 chr2 6422201 6422265 -246834318 + (TTCA)n Simple_repeat Simple_repeat 3 66 0 2789 239 73 10 chr2 6422465 6423700 -246832883 + Charlie1a DNA MER1_type 1 1384 -71 546 278 107 37 chr2 6423968 6424043 -246832540 - MIR SINE MIR -29 233 165 2594 110 6 3 chr2 6424043 6424406 -246832177 + THE1B LTR MaLR 1 364 0 546 278 107 37 chr2 6424406 6424546 -246832037 - MIR SINE MIR -97 165 3 193 239 0 0 chr2 6425407 6425453 -246831130 + MER5A DNA MER1_type 122 167 -22 1228 228 19 42 chr2 6426302 6426662 -246829921 + MLT1A1 LTR MaLR 1 352 -13 306 332 78 29 chr2 6426940 6427145 -246829438 - L1MC/D LINE L1 -2336 5472 5258 281 301 15 15 chr2 6427337 6427472 -246829111 - L1MC/D LINE L1 -1111 5035 4901 358 248 120 77 chr2 6427513 6427864 -246828719 - L1MC/D LINE L1 -1316 4830 4465 1033 145 6 0 chr2 6427900 6428066 -246828517 - AluSg/x SINE Alu -5 305 139 515 325 34 30 chr2 6428071 6428366 -246828217 - L1MC/D LINE L1 -1730 4416 4121 747 176 124 9 chr2 6428367 6428577 -246828006 + MER44D DNA MER2_type 2 505 -104 2495 151 31 7 chr2 6428579 6428995 -246827588 - MSTA LTR MaLR -2 426 1 988 154 6 0 chr2 6428999 6429155 -246827428 + AluSg/x SINE Alu 147 303 -9 1706 131 95 0 chr2 6429361 6429644 -246826939 + AluSx SINE Alu 1 310 -2 283 146 45 22 chr2 6430279 6430368 -246826215 + (TATATG)n Simple_repeat Simple_repeat 6 96 0 379 301 70 7 chr2 6430996 6431139 -246825444 + MER5B DNA MER1_type 1 152 -26 189 0 0 0 chr2 6431294 6431315 -246825268 + (T)n Simple_repeat Simple_repeat 1 21 0 207 243 29 0 chr2 6431798 6431868 -246824715 + (TA)n Simple_repeat Simple_repeat 2 73 0 247 321 89 0 chr2 6432057 6432169 -246824414 - MIR SINE MIR -70 192 71 356 47 0 0 chr2 6433742 6433785 -246822798 + (TG)n Simple_repeat Simple_repeat 2 44 0 209 338 15 0 chr2 6434649 6434717 -246821866 + MIR3 SINE MIR 137 205 -3 944 185 11 5 chr2 6434841 6435030 -246821553 - MLT2C1 LTR ERVL -54 343 154 1144 214 143 31 chr2 6435040 6435396 -246821187 - MSTD LTR MaLR 0 396 1 1119 239 49 3 chr2 6435396 6435701 -246820882 - MSTD-int LTR MaLR 0 1735 1417 1411 163 71 37 chr2 6435701 6436027 -246820556 + THE1C LTR MaLR 1 337 -38 3090 250 114 37 chr2 6436145 6437336 -246819247 - MSTD-int LTR MaLR -369 1282 1 1307 241 84 45 chr2 6437336 6437717 -246818866 - MSTD LTR MaLR 0 396 1 804 140 7 0 chr2 6437717 6437860 -246818723 - MLT2C2 LTR ERVL -316 148 5 334 222 13 6 chr2 6438689 6438847 -246817736 + GA-rich Low_complexity Low_complexity 1 159 0 2171 130 0 0 chr2 6439106 6439413 -246817170 + AluSx SINE Alu 5 311 -1 517 271 47 96 chr2 6439730 6440117 -246816466 + LTR16B LTR ERVL 84 451 -13 437 278 28 0 chr2 6440123 6440231 -246816352 - MER81 DNA DNA -2 112 2 222 308 187 19 chr2 6440682 6440789 -246815794 - L2 LINE L2 -1 3271 3147 210 128 0 0 chr2 6440862 6440901 -246815682 + (TTA)n Simple_repeat Simple_repeat 3 41 0 246 399 35 35 chr2 6440933 6441136 -246815447 - L2 LINE L2 -244 3028 2826 1007 184 0 24 chr2 6441169 6441376 -246815207 + MLT1A1 LTR MaLR 1 202 -163 1849 181 49 0 chr2 6441407 6441755 -246814828 - MLT1A1 LTR MaLR 0 365 1 189 274 42 74 chr2 6442654 6442749 -246813834 - MIR SINE MIR -108 154 63 322 269 99 41 chr2 6443114 6443285 -246813298 + MLT1J2 LTR MaLR 270 450 0 304 360 124 22 chr2 6443299 6443574 -246813009 + L2 LINE L2 2571 2873 -441 2312 63 11 0 chr2 6443661 6443947 -246812636 - AluY SINE Alu -22 289 1 2488 185 55 72 chr2 6443947 6444868 -246811715 + MER63C DNA MER1_type 11 836 -224 1603 164 20 49 chr2 6444868 6445173 -246811410 + AluJb SINE Alu 1 296 -16 2488 185 55 72 chr2 6445173 6445265 -246811318 + MER63C DNA MER1_type 836 928 -2 218 378 72 9 chr2 6445282 6445393 -246811190 + L2 LINE L2 2948 3065 -207 1386 234 121 59 chr2 6446090 6446769 -246809814 + MER50 LTR ERV1 14 734 0 263 414 21 21 chr2 6447094 6447285 -246809298 + MIR SINE MIR 47 237 -25 24 0 0 0 chr2 6447377 6447401 -246809182 + AT_rich Low_complexity Low_complexity 1 24 0 782 230 59 59 chr2 6447546 6447768 -246808815 + MIR SINE MIR 15 236 -26 2443 119 11 16 chr2 6447905 6448282 -246808301 - THE1C LTR MaLR 0 375 1 803 202 62 31 chr2 6448696 6448953 -246807630 + MER97b DNA MER1_type? 47 311 -742 3058 133 16 4 chr2 6448980 6449493 -246807090 - L1PA16 LINE L1 -140 6026 5508 8908 86 5 13 chr2 6449601 6450884 -246805699 - L1P3 LINE L1 -5188 1273 2 222 182 26 13 chr2 6451217 6451294 -246805289 + (TG)n Simple_repeat Simple_repeat 1 78 0 22 35 0 0 chr2 6451734 6451763 -246804820 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 6451807 6451829 -246804754 + AT_rich Low_complexity Low_complexity 1 22 0 726 155 17 28 chr2 6452849 6453030 -246803553 + GA-rich Low_complexity Low_complexity 2 180 0 22 35 0 0 chr2 6455085 6455114 -246801469 + AT_rich Low_complexity Low_complexity 1 29 0 1127 267 114 27 chr2 6456390 6457177 -246799406 + HAL1 LINE L1 1036 1891 -616 378 242 104 30 chr2 6458090 6458321 -246798262 - L1ME4a LINE L1 -257 5864 5617 225 296 12 0 chr2 6458486 6458567 -246798016 - L1ME4a LINE L1 -929 5404 5323 200 362 140 9 chr2 6458768 6458989 -246797594 + L2 LINE L2 2436 2685 -629 531 235 75 30 chr2 6459112 6459539 -246797044 + MLT1C LTR MaLR 6 467 0 3096 86 7 18 chr2 6459643 6460098 -246796485 - L1PA13 LINE L1 -4 6159 5710 204 233 0 0 chr2 6460575 6460618 -246795965 + (CATATA)n Simple_repeat Simple_repeat 3 45 0 456 277 119 45 chr2 6460674 6461252 -246795331 - L1ME4a LINE L1 -238 5883 5263 802 165 170 6 chr2 6461325 6461507 -246795076 - Tigger5 DNA MER2_type 0 2323 2112 1040 257 55 3 chr2 6461512 6461804 -246794779 - Tigger5 DNA MER2_type -2016 307 1 1881 110 18 18 chr2 6465615 6465917 -246790666 - AluSg SINE Alu 0 302 1 2020 135 0 0 chr2 6466206 6466509 -246790074 - AluSx SINE Alu 0 303 1 28 0 0 0 chr2 6467077 6467105 -246789478 + AT_rich Low_complexity Low_complexity 1 28 0 851 151 20 0 chr2 6469092 6469244 -246787339 + MLT2D LTR ERVL 1 155 -259 229 143 143 18 chr2 6469311 6469367 -246787216 - MLT2C2 LTR ERVL -285 179 117 * 1005 209 34 34 chr2 6469331 6469599 -246786984 + MLT2D LTR ERVL 145 412 -2 1159 221 130 54 chr2 6469649 6470099 -246786484 + MLT2B1 LTR ERVL 1 492 -28 324 0 0 0 chr2 6470099 6470135 -246786448 + (CA)n Simple_repeat Simple_repeat 2 37 0 1159 221 130 54 chr2 6470135 6470167 -246786416 + MLT2B1 LTR ERVL 492 520 0 188 358 59 64 chr2 6470211 6470415 -246786168 - L2 LINE L2 -113 3159 2957 28 48 0 0 chr2 6471276 6471318 -246785265 + AT_rich Low_complexity Low_complexity 1 42 0 5859 119 67 2 chr2 6471660 6472757 -246783826 - L1PBa LINE L1 -4016 2847 1680 1277 103 0 0 chr2 6472857 6473031 -246783552 + AluY SINE Alu 138 311 0 1506 134 0 0 chr2 6473388 6473604 -246782979 - AluY SINE Alu -13 298 83 994 192 0 0 chr2 6475095 6475262 -246781321 - FRAM SINE Alu -9 167 1 324 371 102 15 chr2 6475608 6475813 -246780770 + MIR SINE MIR 40 262 0 275 328 123 0 chr2 6476296 6476418 -246780165 - MIR SINE MIR -76 186 50 228 238 0 48 chr2 6477858 6477921 -246778662 + GA-rich Low_complexity Low_complexity 3 62 0 5900 196 48 11 chr2 6478322 6479447 -246777136 + L1 LINE L1 3180 4377 -1769 635 289 24 14 chr2 6479447 6479655 -246776928 - MER6B DNA MER2_type 0 210 1 5900 196 48 11 chr2 6479655 6480036 -246776547 + L1 LINE L1 4377 4742 -1404 4742 253 100 58 chr2 6480048 6482161 -246774422 - L1MDa LINE L1 -4336 2204 3 23 68 0 0 chr2 6482366 6482410 -246774173 + AT_rich Low_complexity Low_complexity 1 44 0 26 0 0 0 chr2 6482843 6482869 -246773714 + AT_rich Low_complexity Low_complexity 1 26 0 426 272 109 22 chr2 6483729 6483913 -246772670 - MIR SINE MIR -15 247 48 422 288 14 63 chr2 6485428 6485650 -246770933 - L2 LINE L2 0 3313 3103 590 159 0 65 chr2 6485677 6485784 -246770799 + AluSq/x SINE Alu 14 113 -199 1004 73 15 0 chr2 6485784 6485920 -246770663 - THE1C LTR MaLR 0 375 238 825 243 136 20 chr2 6485932 6486372 -246770211 - L1M4 LINE L1 -2098 4048 3558 1245 114 15 0 chr2 6486375 6486576 -246770007 - L1MA3 LINE L1 0 6305 6102 4676 210 29 66 chr2 6486577 6488367 -246768216 - L1 LINE L1 -827 6738 5115 2192 119 3 0 chr2 6488367 6488670 -246767913 + AluSp SINE Alu 1 304 -9 4676 210 29 66 chr2 6488670 6488976 -246767607 - L1 LINE L1 -2450 5115 4799 960 93 8 0 chr2 6488980 6489109 -246767474 - AluSc SINE Alu -15 294 165 782 219 60 17 chr2 6489109 6489411 -246767172 - L1 LINE L1 -2759 4806 4492 6568 75 1 4 chr2 6489540 6490765 -246765818 - L1PA7 LINE L1 -29 6125 4906 13340 183 36 9 chr2 6490770 6493320 -246763263 - L1 LINE L1 -4936 2629 11 354 284 21 76 chr2 6493411 6493940 -246762643 - L1M4 LINE L1 -2696 3450 2951 26 50 0 0 chr2 6494630 6494670 -246761913 + AT_rich Low_complexity Low_complexity 1 40 0 210 264 0 0 chr2 6495753 6495806 -246760777 + L2 LINE L2 3203 3255 -17 263 279 67 19 chr2 6497147 6497251 -246759332 - MIR SINE MIR -64 144 36 392 295 26 58 chr2 6497252 6497408 -246759175 + MIR SINE MIR 56 206 -56 239 418 112 16 chr2 6497511 6497760 -246758823 - L2 LINE L2 -40 3232 2960 1521 259 87 26 chr2 6497864 6498523 -246758060 - L1ME1 LINE L1 -114 6052 5354 194 193 18 0 chr2 6498523 6498580 -246758003 + (TA)n Simple_repeat Simple_repeat 1 58 0 1352 210 127 131 chr2 6498590 6499262 -246757321 - L1ME1 LINE L1 -797 5349 4561 697 213 0 0 chr2 6499262 6499384 -246757199 + FAM SINE Alu 21 142 -43 1352 210 127 131 chr2 6499384 6499748 -246756835 - L1ME1 LINE L1 -1585 4561 4197 524 290 134 13 chr2 6499748 6500055 -246756528 - L1M4 LINE L1 -1833 4313 3970 28 29 0 0 chr2 6500163 6500198 -246756385 + AT_rich Low_complexity Low_complexity 1 35 0 1076 205 101 14 chr2 6500435 6500713 -246755870 - MER58B DNA MER1_type -4 337 36 1986 212 8 32 chr2 6502058 6502529 -246754054 - MLT1C LTR MaLR 0 467 8 456 321 63 66 chr2 6503575 6503971 -246752612 - L2 LINE L2 -28 3244 2850 25 51 0 0 chr2 6504252 6504291 -246752292 + AT_rich Low_complexity Low_complexity 1 39 0 314 276 11 0 chr2 6504856 6504943 -246751640 + MIR SINE MIR 7 94 -168 193 290 93 28 chr2 6505283 6505390 -246751193 + MIR SINE MIR 32 145 -63 243 244 0 0 chr2 6505785 6505839 -246750744 + MIR SINE MIR 71 124 -84 340 343 43 60 chr2 6506392 6506625 -246749958 - L3 LINE CR1 -208 1369 1141 191 36 36 0 chr2 6507094 6507122 -246749461 + (CA)n Simple_repeat Simple_repeat 1 29 0 256 333 0 46 chr2 6507888 6507996 -246748587 - L3 LINE CR1 -320 1257 1155 346 368 51 31 chr2 6508054 6508407 -246748176 - L3 LINE CR1 -552 1025 666 1256 67 0 0 chr2 6508878 6509028 -246747555 + AluSq/x SINE Alu 1 150 -163 1238 111 6 18 chr2 6509129 6509300 -246747283 - AluSq SINE Alu -133 180 12 192 302 0 0 chr2 6509794 6509847 -246746736 + MIR3 SINE MIR 113 165 -43 241 313 130 9 chr2 6510410 6510525 -246746058 + MLT1H1 LTR MaLR 102 230 -325 * 265 228 32 65 chr2 6510521 6510644 -246745939 + MLT1F1 LTR MaLR 443 561 -6 201 250 0 0 chr2 6510932 6510976 -246745607 + L3b LINE CR1 1532 1575 -8 198 0 0 0 chr2 6512417 6512439 -246744144 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 317 243 117 10 chr2 6512907 6513010 -246743573 - MIR SINE MIR -65 143 30 278 343 43 7 chr2 6513697 6513837 -246742746 + MIR SINE MIR 51 195 -67 1479 378 25 5 chr2 6514319 6514687 -246741896 - THE1C LTR MaLR 0 375 1 342 281 75 50 chr2 6514692 6514852 -246741731 - MIR SINE MIR -12 250 87 5409 206 51 23 chr2 6515186 6516370 -246740213 - L1MC1 LINE L1 -2 6331 5181 2023 131 34 0 chr2 6516370 6516661 -246739922 + AluSx SINE Alu 1 301 -11 5409 206 51 23 chr2 6516661 6517346 -246739237 - L1MC1 LINE L1 -1152 5181 4395 1448 228 72 20 chr2 6517346 6517693 -246738890 + MLT1A1 LTR MaLR 1 365 0 5409 206 51 23 chr2 6517693 6518095 -246738488 - L1MC1 LINE L1 -1938 4395 4005 1926 149 0 34 chr2 6518986 6519308 -246737275 - AluSx SINE Alu -1 311 1 465 34 0 0 chr2 6519419 6519478 -246737105 + (CA)n Simple_repeat Simple_repeat 1 59 0 230 258 32 0 chr2 6519944 6520006 -246736577 + GA-rich Low_complexity Low_complexity 1 64 0 238 294 65 0 chr2 6520830 6520922 -246735661 - MIR SINE MIR -41 221 124 306 259 120 0 chr2 6521206 6521314 -246735269 - L1ME LINE L1 -440 5681 5561 268 172 0 31 chr2 6522538 6522602 -246733981 + MER5A DNA MER1_type 43 104 -85 21 0 0 0 chr2 6523895 6523916 -246732667 + AT_rich Low_complexity Low_complexity 1 21 0 236 256 35 35 chr2 6524014 6524100 -246732483 - L2 LINE L2 -185 3087 3002 466 311 42 33 chr2 6525086 6525298 -246731285 - MIR SINE MIR -3 259 46 404 325 57 31 chr2 6526826 6527054 -246729529 + MIR SINE MIR 18 251 -11 187 354 25 0 chr2 6527934 6528013 -246728570 + L2 LINE L2 3187 3267 -5 344 196 27 20 chr2 6528682 6528830 -246727753 + (CA)n Simple_repeat Simple_repeat 1 149 0 272 97 42 14 chr2 6528856 6528928 -246727655 + (CA)n Simple_repeat Simple_repeat 1 74 0 22 0 0 0 chr2 6529494 6529516 -246727067 + AT_rich Low_complexity Low_complexity 1 22 0 1668 235 15 50 chr2 6529653 6530176 -246726407 - MLT1D LTR MaLR 0 505 1 214 292 42 25 chr2 6530821 6530941 -246725642 - MIR SINE MIR -120 142 21 320 290 8 40 chr2 6533313 6533437 -246723146 + MIR SINE MIR 34 153 -109 21 36 0 0 chr2 6533462 6533490 -246723093 + AT_rich Low_complexity Low_complexity 1 28 0 1481 195 8 69 chr2 6535456 6535845 -246720738 - MLT1A1 LTR MaLR 0 365 1 204 329 0 0 chr2 6536254 6536333 -246720250 + G-rich Low_complexity Low_complexity 1 79 0 234 62 0 0 chr2 6536705 6536737 -246719846 + (TAA)n Simple_repeat Simple_repeat 1 32 0 202 286 0 0 chr2 6537798 6537868 -246718715 + A-rich Low_complexity Low_complexity 1 70 0 273 179 21 32 chr2 6537993 6538088 -246718495 + T-rich Low_complexity Low_complexity 2 95 0 287 333 23 57 chr2 6538269 6538533 -246718050 + L2 LINE L2 2841 3095 -177 244 203 0 47 chr2 6538579 6538643 -246717940 + L2 LINE L2 3187 3247 -25 588 308 68 8 chr2 6539410 6539647 -246716936 - MIR SINE MIR -11 251 1 7942 179 17 23 chr2 6541067 6542617 -246713966 - LTR25-int LTR ERV1 -5197 1799 259 484 138 11 53 chr2 6542621 6542715 -246713868 - LTR25-int LTR ERV1 -6905 91 2 4567 139 55 4 chr2 6542733 6543485 -246713098 - LTR25 LTR ERV1 0 794 1 191 256 0 23 chr2 6544530 6544573 -246712010 - MIR3 SINE MIR -24 184 143 563 290 43 0 chr2 6545982 6546144 -246710439 - MIR SINE MIR -2 260 92 529 318 23 9 chr2 6546316 6546533 -246710050 + MIR SINE MIR 5 224 -38 259 368 48 0 chr2 6546726 6546851 -246709732 + MIR SINE MIR 20 150 -112 186 302 83 0 chr2 6546967 6547063 -246709520 - MIR SINE MIR -76 132 29 35 63 0 0 chr2 6547626 6547689 -246708894 + AT_rich Low_complexity Low_complexity 1 63 0 2270 108 3 0 chr2 6548771 6549066 -246707517 - AluSx SINE Alu -16 296 1 1971 89 11 4 chr2 6549475 6549746 -246706837 + AluY SINE Alu 39 311 0 1465 161 62 40 chr2 6549754 6550058 -246706525 + AluJo SINE Alu 1 311 -1 245 106 0 43 chr2 6550457 6550504 -246706079 + (GGAA)n Simple_repeat Simple_repeat 3 47 0 199 274 32 0 chr2 6550542 6550604 -246705979 + MIR SINE MIR 159 222 -40 185 158 132 0 chr2 6555012 6555050 -246701533 + MIR SINE MIR 81 123 -85 2387 134 8 21 chr2 6556940 6557320 -246699263 + THE1C LTR MaLR 1 375 0 205 284 142 45 chr2 6559132 6559266 -246697317 + L2 LINE L2 3166 3312 -1 228 325 13 0 chr2 6560242 6560319 -246696264 - MIR SINE MIR -108 154 77 199 220 7 50 chr2 6561481 6561622 -246694961 + GA-rich Low_complexity Low_complexity 2 136 0 243 285 146 8 chr2 6562139 6562262 -246694321 + L2 LINE L2 3132 3271 -1 229 301 12 0 chr2 6562431 6562514 -246694069 + MIR SINE MIR 111 194 -68 748 247 57 10 chr2 6562552 6562746 -246693837 - MLT1B LTR MaLR 0 467 265 329 281 9 9 chr2 6562746 6562860 -246693723 - MIR SINE MIR -132 130 17 794 196 87 4 chr2 6562931 6563156 -246693427 - MLT1B LTR MaLR -186 204 9 625 289 21 4 chr2 6563193 6563428 -246693155 + MIR SINE MIR 20 258 -4 352 242 77 0 chr2 6565024 6565115 -246691468 + MER63 DNA MER1_type 1 724 -338 567 203 99 81 chr2 6565514 6565736 -246690847 + HAL1 LINE L1 1 226 -2281 818 170 12 12 chr2 6566219 6566469 -246690114 + GA-rich Low_complexity Low_complexity 1 250 0 357 24 0 0 chr2 6566471 6566513 -246690070 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 825 241 137 52 chr2 6566514 6566938 -246689645 - MLT1C LTR MaLR -4 463 4 237 259 12 25 chr2 6566941 6567022 -246689561 + GA-rich Low_complexity Low_complexity 3 82 0 1843 219 73 7 chr2 6567132 6567584 -246688999 + L1MB2 LINE L1 5686 6167 -4 406 83 0 17 chr2 6567886 6567946 -246688637 - L1PA13 LINE L1 -847 5458 5400 5025 90 1 13 chr2 6567946 6568644 -246687939 + L1PA13 LINE L1 5470 6161 -2 198 260 26 52 chr2 6569410 6569487 -246687096 - MIR3 SINE MIR -39 169 95 210 37 0 0 chr2 6569767 6569794 -246686789 + (CAGAGA)n Simple_repeat Simple_repeat 4 30 0 209 270 126 50 chr2 6570513 6570672 -246685911 - MIR3 SINE MIR -22 186 16 226 304 194 42 chr2 6571175 6571366 -246685217 + MIR SINE MIR 30 249 -13 399 306 136 71 chr2 6571859 6572425 -246684158 + L1MC4a LINE L1 5265 5867 -1941 1868 81 20 6 chr2 6573100 6573490 -246683093 - MLT2A2 LTR ERVL 0 453 1 515 294 0 0 chr2 6574575 6574738 -246681845 + MIR SINE MIR 95 257 -5 219 333 28 28 chr2 6574760 6574868 -246681715 - MIR SINE MIR -64 144 37 483 332 62 7 chr2 6575177 6575451 -246681132 - L1ME LINE L1 -307 5814 5526 661 123 0 25 chr2 6575601 6575723 -246680860 + (GGAA)n Simple_repeat Simple_repeat 1 119 0 199 274 32 0 chr2 6575761 6575823 -246680760 + MIR SINE MIR 159 222 -40 191 343 81 6 chr2 6576323 6576495 -246680088 + L2 LINE L2 2981 3165 -148 2025 130 33 20 chr2 6576598 6576899 -246679684 - AluSq SINE Alu -8 305 1 2586 71 21 0 chr2 6576974 6577312 -246679271 + L1P3 LINE L1 5361 5705 -467 219 319 8 50 chr2 6577313 6577432 -246679151 + L2 LINE L2 3180 3293 -20 327 301 64 13 chr2 6578523 6578679 -246677904 - MIR SINE MIR -62 200 37 450 83 0 42 chr2 6578747 6578819 -246677764 + MADE1 DNA Mariner 10 78 -2 346 252 48 29 chr2 6578821 6578924 -246677659 - L2 LINE L2 -36 3277 3173 196 320 39 39 chr2 6579232 6579410 -246677173 - L2 LINE L2 -578 2736 2559 295 233 63 47 chr2 6579709 6579795 -246676788 - MIR3 SINE MIR -53 155 68 28 0 0 0 chr2 6579863 6579891 -246676692 + AT_rich Low_complexity Low_complexity 1 28 0 299 333 9 0 chr2 6580753 6580858 -246675725 + MIR3 SINE MIR 67 172 -36 2195 112 0 3 chr2 6581375 6581670 -246674913 + AluSc SINE Alu 1 294 -15 2332 95 0 20 chr2 6582340 6582645 -246673938 + AluSg SINE Alu 1 299 -11 192 252 9 17 chr2 6582963 6583078 -246673505 + GA-rich Low_complexity Low_complexity 4 117 0 401 205 53 76 chr2 6583082 6583253 -246673330 + HAL1 LINE L1 1011 1177 -1330 819 284 192 15 chr2 6583285 6583743 -246672840 + L1ME1 LINE L1 36 574 -5822 1225 265 86 52 chr2 6583761 6584912 -246671671 + L1ME1 LINE L1 1091 6230 -5 337 159 63 0 chr2 6585565 6585628 -246670955 - MLT1A2 LTR MaLR 0 390 324 586 228 124 0 chr2 6585638 6585783 -246670800 + FRAM SINE Alu 4 166 0 562 250 6 6 chr2 6585783 6585963 -246670620 + GA-rich Low_complexity Low_complexity 1 180 0 519 227 4 9 chr2 6585986 6586134 -246670449 - MLT1A2 LTR MaLR -56 372 192 750 219 21 42 chr2 6586184 6586376 -246670207 - MLT1A2 LTR MaLR -186 188 1 392 269 85 28 chr2 6586472 6586737 -246669846 - L1ME LINE L1 -4685 1576 1107 1594 223 77 12 chr2 6586752 6587183 -246669400 - MLT1C LTR MaLR 0 467 1 2111 273 82 26 chr2 6587183 6588336 -246668247 - L1ME LINE L1 -4846 1234 14 568 309 73 25 chr2 6588987 6589379 -246667204 - MLT1J LTR MaLR -45 466 13 279 0 0 0 chr2 6589736 6589767 -246666816 + (CA)n Simple_repeat Simple_repeat 2 32 0 359 318 0 0 chr2 6589768 6589875 -246666708 - MER5B DNA MER1_type -71 107 1 1027 142 0 0 chr2 6590279 6590434 -246666149 - AluSx SINE Alu -1 311 157 585 111 0 0 chr2 6590434 6590515 -246666068 - AluSx SINE Alu -231 82 2 1962 146 7 0 chr2 6590547 6590850 -246665733 + AluJb SINE Alu 1 305 0 313 176 110 11 chr2 6590934 6591025 -246665558 - MLT1J LTR MaLR -38 473 374 32544 218 19 16 chr2 6591060 6599486 -246657097 - HUERS-P3 LTR ERV1 -224 8695 259 484 138 11 53 chr2 6599490 6599584 -246656999 - HUERS-P3 LTR ERV1 -6905 91 2 4856 136 44 3 chr2 6599602 6600361 -246656222 - LTR25 LTR ERV1 0 794 1 191 256 0 23 chr2 6601406 6601449 -246655134 - MIR3 SINE MIR -24 184 143 563 290 43 0 chr2 6602860 6603022 -246653561 - MIR SINE MIR -2 260 92 529 318 23 9 chr2 6603194 6603411 -246653172 + MIR SINE MIR 5 224 -38 259 368 48 0 chr2 6603605 6603730 -246652853 + MIR SINE MIR 20 150 -112 186 302 83 0 chr2 6603846 6603942 -246652641 - MIR SINE MIR -76 132 29 35 63 0 0 chr2 6604505 6604568 -246652015 + AT_rich Low_complexity Low_complexity 1 63 0 2292 112 0 0 chr2 6605650 6605946 -246650637 - AluSx SINE Alu -16 296 1 2264 54 0 0 chr2 6606355 6606615 -246649968 + AluY SINE Alu 39 298 -13 233 226 10 98 chr2 6607489 6607591 -246648992 - MIR SINE MIR -59 203 111 1641 134 130 88 chr2 6607741 6607788 -246648795 + MSTA LTR MaLR 3 47 -381 583 88 0 0 chr2 6607788 6607868 -246648715 - MADE1 DNA Mariner 0 80 1 1641 134 130 88 chr2 6607868 6608229 -246648354 + MSTA LTR MaLR 47 428 0 185 297 20 68 chr2 6608388 6608536 -246648047 + L2 LINE L2 2560 2700 -614 804 290 30 32 chr2 6608670 6609241 -246647342 + L1ME3A LINE L1 5458 6157 -13 318 295 29 7 chr2 6609550 6609689 -246646894 - L1ME LINE L1 -351 5811 5670 1500 162 63 36 chr2 6610011 6610314 -246646269 - AluJo SINE Alu -1 311 1 2234 65 7 4 chr2 6610322 6610597 -246645986 - AluY SINE Alu -1 310 35 393 290 59 6 chr2 6610619 6610788 -246645795 + L2 LINE L2 2698 2875 -439 434 287 28 85 chr2 6610923 6611156 -246645427 + L2 LINE L2 3009 3254 -59 2131 140 79 15 chr2 6611156 6611498 -246645085 + THE1B LTR MaLR 1 364 0 11882 89 11 1 chr2 6611498 6613061 -246643522 + THE1B-int LTR MaLR 1 1579 -1 2245 117 73 15 chr2 6613064 6613406 -246643177 + THE1B LTR MaLR 3 364 0 434 287 28 85 chr2 6613406 6613484 -246643099 + L2 LINE L2 3255 3307 -6 248 212 91 30 chr2 6613529 6613628 -246642955 + MIR SINE MIR 60 164 -98 324 48 0 0 chr2 6613790 6613832 -246642751 + (CA)n Simple_repeat Simple_repeat 2 43 0 341 288 108 42 chr2 6614899 6615139 -246641444 - MIR SINE MIR 0 262 7 287 340 22 55 chr2 6615677 6615948 -246640635 + L2 LINE L2 2834 3095 -177 244 203 0 47 chr2 6615994 6616058 -246640525 + L2 LINE L2 3187 3247 -25 595 284 85 21 chr2 6616822 6617058 -246639525 - MIR SINE MIR -11 251 1 21 57 0 0 chr2 6618113 6618148 -246638435 + GC_rich Low_complexity Low_complexity 1 35 0 514 265 110 82 chr2 6619199 6619689 -246636894 + Tigger8 DNA MER2_type 63 566 -100 1784 203 12 50 chr2 6619866 6620270 -246636313 - MLT1B LTR MaLR 0 390 2 393 261 130 52 chr2 6620890 6621213 -246635370 + L1M3 LINE L1 3103 3444 -2702 615 314 51 46 chr2 6621650 6622042 -246634541 + MER68 LTR ERV1 156 549 -13 180 111 0 0 chr2 6622047 6622074 -246634509 + (CA)n Simple_repeat Simple_repeat 1 27 0 500 230 100 53 chr2 6622192 6622441 -246634142 + L1M3 LINE L1 5183 5440 -728 2545 188 46 0 chr2 6622469 6622922 -246633661 + MER101 LTR ERV1 1 474 0 1948 174 43 57 chr2 6624093 6624589 -246631994 + MER31-int LTR ERV1 815 3120 -3211 567 270 56 30 chr2 6624520 6624790 -246631793 + LTR57-int LTR ERVL 1234 1510 -3833 * 473 263 71 25 chr2 6624832 6625030 -246631553 + MER31-int LTR ERV1 1711 1917 -3019 1223 188 32 73 chr2 6625118 6625624 -246630959 + MER31-int LTR ERV1 2052 3835 -2428 901 143 20 51 chr2 6625768 6625964 -246630619 + MER31-int LTR ERV1 3541 3730 -2868 1288 201 98 81 chr2 6626044 6626624 -246629959 + MER31-int LTR ERV1 3287 3501 -1514 2732 150 11 23 chr2 6626624 6627057 -246629526 + MSTA LTR MaLR 1 428 0 1288 201 98 81 chr2 6627057 6627644 -246628939 + MER31-int LTR ERV1 3501 4077 -938 262 169 56 61 chr2 6627665 6627813 -246628770 + MER31-int LTR ERV1 5200 5397 -934 534 229 21 21 chr2 6627822 6627966 -246628617 + MER31-int LTR ERV1 4259 4402 -534 381 305 71 38 chr2 6629437 6629649 -246626934 - MIR SINE MIR -6 256 35 942 260 66 3 chr2 6631569 6631857 -246624726 - L1ME3A LINE L1 -2 6168 5863 204 310 150 0 chr2 6631889 6631989 -246624594 + L2 LINE L2 2541 2655 -659 204 315 14 27 chr2 6632435 6632508 -246624075 + L2 LINE L2 3201 3272 0 330 275 62 83 chr2 6632538 6632730 -246623853 + MIR SINE MIR 19 204 -58 30 45 0 0 chr2 6632745 6632789 -246623794 + AT_rich Low_complexity Low_complexity 1 44 0 4176 113 28 2 chr2 6632904 6633469 -246623114 - LTR19B LTR ERV1 0 580 1 53 0 0 0 chr2 6633498 6633551 -246623032 + AT_rich Low_complexity Low_complexity 1 53 0 267 224 24 88 chr2 6633966 6634091 -246622492 + MER94 DNA DNA 1 117 -17 331 331 63 0 chr2 6634131 6634273 -246622310 + MIR SINE MIR 46 196 -66 340 294 133 45 chr2 6634655 6634941 -246621642 + HAL1 LINE L1 593 903 -1604 1228 275 144 29 chr2 6634942 6635690 -246620893 + HAL1 LINE L1 928 1761 -746 253 141 109 43 chr2 6635782 6635874 -246620709 + LTR33A LTR ERVL 360 457 -66 231 316 59 59 chr2 6636551 6636687 -246619896 + MER5B DNA MER1_type 43 178 0 23 54 0 0 chr2 6637564 6637601 -246618982 + AT_rich Low_complexity Low_complexity 1 37 0 750 316 56 22 chr2 6637716 6638039 -246618544 - MER68 LTR ERV1 0 562 229 202 331 8 58 chr2 6640705 6640826 -246615757 - L2 LINE L2 -223 3049 2935 22 56 0 0 chr2 6643791 6643827 -246612756 + AT_rich Low_complexity Low_complexity 1 36 0 293 305 102 11 chr2 6643993 6644180 -246612403 + L1ME LINE L1 5518 5721 -400 2390 75 3 0 chr2 6644182 6644506 -246612077 + AluY SINE Alu 1 311 0 22 0 0 0 chr2 6645069 6645091 -246611492 + AT_rich Low_complexity Low_complexity 1 22 0 197 306 124 16 chr2 6645122 6645243 -246611340 - MIR SINE MIR -10 252 119 394 197 271 0 chr2 6645330 6645452 -246611131 - MER5A DNA MER1_type -7 182 28 1143 252 72 6 chr2 6645496 6645814 -246610769 + MER58B DNA MER1_type 2 340 -1 23 33 0 0 chr2 6646418 6646448 -246610135 + AT_rich Low_complexity Low_complexity 1 30 0 1387 188 90 10 chr2 6647155 6647443 -246609140 - AluJb SINE Alu -1 311 1 205 156 0 0 chr2 6648007 6648039 -246608544 + (CATG)n Simple_repeat Simple_repeat 3 34 0 2211 99 10 0 chr2 6650419 6650711 -246605872 + AluSg SINE Alu 6 300 -10 186 71 0 0 chr2 6650978 6651006 -246605577 + (CCA)n Simple_repeat Simple_repeat 2 29 0 206 196 18 18 chr2 6651466 6651522 -246605061 + (TATATG)n Simple_repeat Simple_repeat 1 56 0 32593 109 7 59 chr2 6651522 6657206 -246599377 - L1PA7 LINE L1 -12 6142 843 2234 129 0 0 chr2 6657206 6657516 -246599067 - AluSg SINE Alu 0 310 1 32593 109 7 59 chr2 6657516 6658307 -246598276 - L1PA7 LINE L1 -5311 843 12 310 230 111 0 chr2 6658430 6658565 -246598018 - L1ME4a LINE L1 0 6121 5972 495 0 0 0 chr2 6658838 6658893 -246597690 + (CA)n Simple_repeat Simple_repeat 2 56 0 1300 234 101 3 chr2 6659242 6659579 -246597004 - MLT1A2 LTR MaLR -4 370 1 198 187 103 14 chr2 6660263 6660328 -246596255 + MIR SINE MIR 82 214 -48 235 433 55 16 chr2 6660598 6660725 -246595858 - L2 LINE L2 -18 3254 3123 2443 117 6 6 chr2 6660910 6661260 -246595323 + L1PB1 LINE L1 5801 6150 -1 281 328 41 16 chr2 6662268 6662390 -246594193 - MIR SINE MIR -34 228 104 297 0 0 0 chr2 6663049 6663082 -246593501 + (TG)n Simple_repeat Simple_repeat 2 34 0 310 269 13 0 chr2 6663485 6663563 -246593020 - LTR16A LTR ERVL 0 450 372 298 210 25 25 chr2 6664266 6664347 -246592236 - MLT1J1 LTR MaLR -2 444 364 255 367 0 0 chr2 6664819 6664898 -246591685 + MIR3 SINE MIR 109 187 -21 252 313 111 0 chr2 6664970 6665069 -246591514 - L2 LINE L2 -1 3271 3162 2809 143 22 13 chr2 6665219 6665307 -246591276 - MLT1C LTR MaLR 0 467 381 2475 157 80 46 chr2 6665307 6665347 -246591236 - MLT2B2 LTR ERVL 0 515 478 415 32 16 16 chr2 6665347 6665409 -246591174 + (TAGA)n Simple_repeat Simple_repeat 2 63 0 2475 157 80 46 chr2 6665409 6665866 -246590717 - MLT2B2 LTR ERVL -37 478 1 2809 143 22 13 chr2 6665866 6666226 -246590357 - MLT1C LTR MaLR -86 381 15 2529 110 42 14 chr2 6666452 6666806 -246589777 - THE1B LTR MaLR 0 364 1 21 0 0 0 chr2 6667122 6667143 -246589440 + AT_rich Low_complexity Low_complexity 1 21 0 2405 83 6 3 chr2 6667218 6667530 -246589053 - AluSp SINE Alu 0 313 1 197 194 0 0 chr2 6667963 6667999 -246588584 - MIR SINE MIR -9 253 218 810 238 0 0 chr2 6668998 6669166 -246587417 - AluJb SINE Alu -14 298 131 412 271 142 7 chr2 6669167 6669322 -246587261 - MIR SINE MIR -69 193 18 34 84 0 0 chr2 6670005 6670088 -246586495 + GC_rich Low_complexity Low_complexity 1 83 0 22 70 0 0 chr2 6670195 6670238 -246586345 + GC_rich Low_complexity Low_complexity 1 43 0 2650 152 11 2 chr2 6670416 6670857 -246585726 - L1PB4 LINE L1 -318 5838 5394 367 23 0 0 chr2 6671162 6671205 -246585378 + (TTTA)n Simple_repeat Simple_repeat 2 176 0 1451 163 50 50 chr2 6671205 6671487 -246585096 - AluJo SINE Alu -28 284 3 201 319 87 0 chr2 6672638 6672707 -246583876 - MER91C DNA MER1_type -47 93 19 887 206 0 0 chr2 6672752 6672907 -246583676 + AluJb SINE Alu 127 281 -31 346 247 103 0 chr2 6673606 6673703 -246582880 - L2 LINE L2 -12 3260 3154 660 315 94 44 chr2 6674764 6675757 -246580826 - L2 LINE L2 -16 3297 2191 953 43 0 0 chr2 6675830 6675947 -246580636 + L1PA13 LINE L1 6041 6157 -6 1584 210 127 50 chr2 6676435 6676916 -246579667 + MLT2B1 LTR ERVL 1 518 -2 271 328 108 10 chr2 6679715 6679919 -246576664 + L1ME3A LINE L1 5567 5790 -2018 340 253 33 22 chr2 6680537 6680628 -246575955 - MIR SINE MIR -28 234 143 245 280 68 68 chr2 6680702 6680909 -246575674 + MLT1H LTR MaLR 130 336 -213 352 223 268 0 chr2 6680972 6681084 -246575499 - MIR SINE MIR -115 147 6 658 280 82 0 chr2 6681289 6681496 -246575087 + MER58A DNA MER1_type 1 224 0 335 115 0 0 chr2 6682020 6682072 -246574511 + MADE1 DNA Mariner 29 80 0 313 154 92 0 chr2 6682590 6682655 -246573928 + MER67A LTR ERV1 18 88 -455 1487 248 45 14 chr2 6682711 6683138 -246573445 + MER67A LTR ERV1 84 523 -20 257 303 50 10 chr2 6683251 6683350 -246573233 - MIR SINE MIR -59 203 101 357 390 39 18 chr2 6683779 6684061 -246572522 - L3 LINE CR1 -554 1023 736 530 289 70 18 chr2 6684791 6685133 -246571450 + L1M4 LINE L1 2201 2560 -3586 709 272 67 22 chr2 6685149 6685417 -246571166 + L1ME3A LINE L1 5859 6138 -32 630 316 201 5 chr2 6685606 6685980 -246570603 + L2 LINE L2 2867 3313 0 605 285 117 61 chr2 6687197 6687523 -246569060 + L2 LINE L2 2970 3313 0 26 0 0 0 chr2 6687613 6687639 -246568944 + AT_rich Low_complexity Low_complexity 1 26 0 266 280 75 19 chr2 6687712 6687819 -246568764 - MIR SINE MIR -142 120 8 420 37 0 0 chr2 6688493 6688547 -246568036 + (CA)n Simple_repeat Simple_repeat 2 55 0 370 368 0 0 chr2 6689541 6689666 -246566917 + MIR SINE MIR 22 146 -62 730 178 0 15 chr2 6689873 6690008 -246566575 + FLAM_C SINE Alu 1 133 0 528 156 33 25 chr2 6690013 6690135 -246566448 - MER53 DNA DNA -12 177 55 183 278 130 99 chr2 6691074 6691236 -246565347 + L3b LINE CR1 1337 1503 -80 234 364 78 31 chr2 6691282 6691411 -246565172 + MIR3 SINE MIR 11 145 -63 358 318 94 15 chr2 6691576 6691777 -246564806 + L3 LINE CR1 1361 1577 0 186 103 0 0 chr2 6691826 6691855 -246564728 + (TTTTTG)n Simple_repeat Simple_repeat 6 34 0 299 257 59 65 chr2 6692090 6692281 -246564302 + MIR SINE MIR 5 196 -65 183 80 0 0 chr2 6693915 6693940 -246562643 + (GA)n Simple_repeat Simple_repeat 2 26 0 180 344 0 0 chr2 6694125 6694189 -246562394 - MIR SINE MIR -129 133 70 653 169 92 23 chr2 6694192 6694322 -246562261 - MSTA LTR MaLR -234 141 3 407 349 31 15 chr2 6694335 6694662 -246561921 + L1M4 LINE L1 3826 4157 -1989 22 0 0 0 chr2 6694728 6694750 -246561833 + AT_rich Low_complexity Low_complexity 1 22 0 250 275 12 12 chr2 6694782 6694862 -246561721 - LTR33A LTR ERVL 0 523 444 655 286 43 22 chr2 6694866 6695142 -246561441 - MLT1C LTR MaLR 0 467 186 775 279 8 8 chr2 6695267 6695521 -246561062 - MLT1C LTR MaLR -213 254 1 25 0 0 0 chr2 6695922 6695947 -246560636 + AT_rich Low_complexity Low_complexity 1 25 0 320 329 32 4 chr2 6696096 6696342 -246560241 + L1ME3A LINE L1 5695 5947 -223 456 305 99 15 chr2 6698019 6698281 -246558302 - LTR16A LTR ERVL -14 436 153 952 285 119 34 chr2 6698307 6699023 -246557560 + HAL1 LINE L1 979 1755 -752 1784 162 72 57 chr2 6699095 6699514 -246557069 - MSTB1 LTR MaLR -5 427 3 343 262 38 93 chr2 6699603 6699893 -246556690 + HAL1 LINE L1 1936 2209 -298 884 185 101 63 chr2 6700215 6700631 -246555952 + MLT1D LTR MaLR 22 505 0 286 228 114 74 chr2 6700982 6701131 -246555452 + MIR SINE MIR 19 173 -89 1816 166 3 0 chr2 6701677 6701960 -246554623 - AluJb SINE Alu -23 289 6 481 285 15 0 chr2 6702157 6702294 -246554289 + L3 LINE CR1 1201 1339 -238 300 328 25 25 chr2 6702685 6702807 -246553776 - MER5A DNA MER1_type -12 177 56 216 200 0 0 chr2 6703057 6703107 -246553476 + (TG)n Simple_repeat Simple_repeat 2 51 0 1531 264 27 2 chr2 6703107 6703632 -246552951 + L1MCa LINE L1 2371 2910 -3516 435 169 34 59 chr2 6703807 6703925 -246552658 - LTR67 LTR ERVL 0 557 443 2477 46 0 0 chr2 6705453 6705759 -246550824 - L1PA2 LINE L1 -7 6148 5843 319 87 0 0 chr2 6706146 6706192 -246550391 + MADE1 DNA Mariner 5 50 -30 921 160 30 5 chr2 6706200 6706835 -246549748 + (TCTA)n Simple_repeat Simple_repeat 1 651 0 402 21 0 0 chr2 6706856 6706903 -246549680 + (TG)n Simple_repeat Simple_repeat 2 48 0 275 338 163 0 chr2 6707457 6707617 -246548966 + MIR SINE MIR 77 262 0 21 36 0 0 chr2 6707901 6707929 -246548654 + AT_rich Low_complexity Low_complexity 1 28 0 335 312 22 14 chr2 6708050 6708188 -246548395 + MLT1J2 LTR MaLR 46 184 -266 967 247 54 30 chr2 6709267 6709672 -246546911 - L1M4 LINE L1 -2452 4192 3778 1146 237 28 59 chr2 6709688 6710043 -246546540 + MLT1A1 LTR MaLR 1 344 -21 614 244 0 0 chr2 6710041 6710160 -246546423 - MLT1A1 LTR MaLR -246 119 1 * 1086 242 93 8 chr2 6710229 6710444 -246546139 - L1M4 LINE L1 -2884 3760 3565 273 57 0 0 chr2 6710444 6710479 -246546104 + (TG)n Simple_repeat Simple_repeat 2 36 0 1086 242 93 8 chr2 6710479 6710767 -246545816 - L1M4 LINE L1 -3079 3565 3214 297 227 78 50 chr2 6710783 6710924 -246545659 - L1M4 LINE L1 -6381 161 17 189 74 0 0 chr2 6711837 6711864 -246544719 + (TAAAA)n Simple_repeat Simple_repeat 1 27 0 1025 213 115 20 chr2 6712186 6712439 -246544144 + AluJo SINE Alu 1 277 -35 1965 138 7 3 chr2 6712457 6712748 -246543835 + AluSx SINE Alu 1 292 -20 36 40 0 0 chr2 6712748 6712798 -246543785 + AT_rich Low_complexity Low_complexity 1 50 0 222 311 27 14 chr2 6713947 6714021 -246542562 - MIR SINE MIR -150 112 38 731 160 33 0 chr2 6714148 6714298 -246542285 + BC200 scRNA scRNA 1 155 -45 180 239 68 45 chr2 6715573 6715661 -246540922 - MIR SINE MIR -103 105 16 27 73 0 0 chr2 6715751 6715806 -246540777 + AT_rich Low_complexity Low_complexity 1 55 0 278 325 71 26 chr2 6717343 6717497 -246539086 + L2 LINE L2 2914 3074 -198 1101 30 8 8 chr2 6719155 6719286 -246537297 - AluY SINE Alu -180 131 1 286 326 56 41 chr2 6720256 6720452 -246536131 + MIR SINE MIR 35 233 -29 381 350 64 6 chr2 6720481 6720638 -246535945 - MIR SINE MIR -77 185 20 471 285 158 13 chr2 6720645 6720803 -246535780 - MER5A DNA MER1_type 0 189 9 223 93 0 74 chr2 6720899 6720953 -246535630 + (GGAGAA)n Simple_repeat Simple_repeat 2 51 0 227 315 56 11 chr2 6721324 6721413 -246535170 + MIR SINE MIR 118 210 -52 2004 205 117 16 chr2 6721413 6721916 -246534667 - MLT2B3 LTR ERVL 0 554 1 650 264 40 40 chr2 6722038 6722278 -246534305 - MIR SINE MIR -11 251 16 1781 133 96 37 chr2 6722861 6723215 -246533368 - THE1C LTR MaLR 0 375 1 1573 187 45 18 chr2 6723330 6723694 -246532889 + MLT1A1 LTR MaLR 3 467 0 232 241 24 60 chr2 6724680 6724763 -246531820 - MIR3 SINE MIR -11 197 118 260 250 80 10 chr2 6724813 6724913 -246531670 + MIR SINE MIR 81 187 -75 238 313 9 54 chr2 6724902 6725014 -246531569 + L2 LINE L2 3207 3313 0 * 205 306 106 12 chr2 6725070 6725155 -246531428 - MIR3 SINE MIR -102 106 14 334 253 42 0 chr2 6726259 6726354 -246530229 + MER94 DNA DNA 21 119 -15 281 153 0 56 chr2 6726641 6726713 -246529870 + L1PA16 LINE L1 6095 6162 -4 207 0 0 0 chr2 6727032 6727055 -246529528 + (TG)n Simple_repeat Simple_repeat 1 23 0 1788 146 19 45 chr2 6727356 6727733 -246528850 - THE1C LTR MaLR -8 367 1 1183 212 50 32 chr2 6727750 6728127 -246528456 + L1MC4 LINE L1 7044 7427 -615 696 215 10 40 chr2 6728121 6728321 -246528262 - L1MC4 LINE L1 -961 7081 6888 * 292 276 48 0 chr2 6728439 6728544 -246528039 - MIR3 SINE MIR -9 199 90 252 86 0 0 chr2 6729345 6729380 -246527203 + (T)n Simple_repeat Simple_repeat 1 35 0 2301 103 0 0 chr2 6730198 6730499 -246526084 + AluY SINE Alu 1 301 -10 2782 96 8 0 chr2 6730631 6731027 -246525556 - MLT2A2 LTR ERVL -53 400 2 224 318 95 84 chr2 6731590 6731769 -246524814 - L2 LINE L2 -36 3236 3056 370 323 40 56 chr2 6731992 6732254 -246524329 + MIR SINE MIR 9 261 -1 41 58 0 0 chr2 6732342 6732411 -246524172 + AT_rich Low_complexity Low_complexity 1 69 0 219 339 64 53 chr2 6733096 6733261 -246523322 - MIR SINE MIR -75 133 8 242 231 0 0 chr2 6733326 6733378 -246523205 + L2 LINE L2 3262 3313 0 373 118 0 24 chr2 6734615 6734700 -246521883 + (TA)n Simple_repeat Simple_repeat 2 84 0 401 0 20 0 chr2 6735238 6735287 -246521296 + (TG)n Simple_repeat Simple_repeat 2 51 0 215 260 80 30 chr2 6735725 6735825 -246520758 + MIR3 SINE MIR 93 197 -11 * 241 231 215 31 chr2 6735821 6735951 -246520632 - MIR SINE MIR -4 258 105 189 0 0 0 chr2 6736869 6736890 -246519693 + (TAA)n Simple_repeat Simple_repeat 2 22 0 28 0 0 0 chr2 6737515 6737543 -246519040 + AT_rich Low_complexity Low_complexity 1 28 0 798 245 20 0 chr2 6737569 6737765 -246518818 + L1ME1 LINE L1 5480 5679 -487 1099 153 0 10 chr2 6737769 6737971 -246518612 + L1PBa LINE L1 1 200 -6663 * 2496 129 35 18 chr2 6737945 6738454 -246518129 + L1PBa LINE L1 599 1159 -5704 9544 97 62 6 chr2 6738456 6740052 -246516531 + L1PBa LINE L1 1311 2996 -3866 812 212 16 11 chr2 6740052 6740241 -246516342 - LTR1 LTR ERV1 -593 192 3 13374 175 45 54 chr2 6740243 6743358 -246513225 - HUERS-P2 LTR ERV1 0 3088 2 2313 197 108 65 chr2 6743359 6744150 -246512433 - LTR1B LTR ERV1 0 826 2 5172 175 25 9 chr2 6744151 6745786 -246510797 + L1PB1 LINE L1 4132 5791 -360 207 143 57 29 chr2 6745801 6745906 -246510677 + (TA)n Simple_repeat Simple_repeat 1 108 0 434 45 45 30 chr2 6745944 6745998 -246510585 - L1PB1 LINE L1 -302 5849 5792 207 0 0 0 chr2 6745998 6746021 -246510562 + (TG)n Simple_repeat Simple_repeat 1 23 0 434 45 45 30 chr2 6746021 6746033 -246510550 - L1PB1 LINE L1 -359 5792 5782 455 127 70 14 chr2 6746050 6746315 -246510268 + (TA)n Simple_repeat Simple_repeat 1 250 -425 2713 63 11 8 chr2 6746315 6746679 -246509904 + L1PB1 LINE L1 5782 6146 -5 455 127 70 14 chr2 6746679 6746690 -246509893 + (TA)n Simple_repeat Simple_repeat 250 675 0 1159 249 95 19 chr2 6746696 6747169 -246509414 + L1ME1 LINE L1 5654 6162 -4 902 122 23 0 chr2 6747189 6747320 -246509263 + AluSx SINE Alu 1 134 -178 402 151 0 0 chr2 6747320 6747393 -246509190 + (TA)n Simple_repeat Simple_repeat 2 74 0 1093 141 0 40 chr2 6747396 6747573 -246509010 + AluSx SINE Alu 127 296 -16 249 33 0 0 chr2 6748258 6748288 -246508295 + (CA)n Simple_repeat Simple_repeat 1 30 0 215 288 38 0 chr2 6748590 6748670 -246507913 + (CAGA)n Simple_repeat Simple_repeat 2 84 0 296 291 50 64 chr2 6749316 6749457 -246507126 + L2 LINE L2 3134 3272 0 386 298 33 33 chr2 6750205 6750326 -246506257 - L2 LINE L2 -9 3304 3184 910 289 43 10 chr2 6750623 6750924 -246505659 + L2 LINE L2 1911 2221 -1093 313 306 20 14 chr2 6750943 6751090 -246505493 + L1MEc LINE L1 67 214 -6182 527 291 50 48 chr2 6751601 6751797 -246504786 + L1MEc LINE L1 658 852 -5353 2124 123 10 3 chr2 6751797 6752098 -246504485 + AluSq SINE Alu 1 303 -10 527 291 50 48 chr2 6752098 6752506 -246504077 + L1MEc LINE L1 852 1220 -4985 3364 138 57 7 chr2 6752543 6753158 -246503425 - Tigger4(Zombi) DNA MER2_type 0 2731 2086 504 152 235 38 chr2 6753155 6753287 -246503296 - Tigger4(Zombi) DNA MER2_type -2571 160 3 * 213 167 21 21 chr2 6753287 6753335 -246503248 + (CA)n Simple_repeat Simple_repeat 1 48 0 666 278 91 53 chr2 6753438 6753579 -246503004 + L1MEc LINE L1 1506 1640 -4756 832 207 5 0 chr2 6753579 6753767 -246502816 + L1MD1 LINE L1 6054 6242 0 666 278 91 53 chr2 6753767 6753951 -246502632 + L1MEc LINE L1 1640 1815 -4581 2133 142 0 0 chr2 6753951 6754260 -246502323 + AluSx SINE Alu 1 309 -3 666 278 91 53 chr2 6754260 6754713 -246501870 + L1MEc LINE L1 1815 2315 -4081 3891 239 84 18 chr2 6754758 6755815 -246500768 + L1M4b LINE L1 227 1353 -5506 2232 108 0 0 chr2 6755819 6756107 -246500476 + AluSc SINE Alu 1 288 -21 213 241 0 0 chr2 6756109 6756163 -246500420 + (TA)n Simple_repeat Simple_repeat 1 54 0 291 117 83 0 chr2 6756164 6756224 -246500359 + L1M4b LINE L1 1357 1421 -5438 321 159 0 0 chr2 6756424 6756487 -246500096 + (TG)n Simple_repeat Simple_repeat 1 63 0 21 36 0 0 chr2 6757362 6757390 -246499193 + AT_rich Low_complexity Low_complexity 1 28 0 197 377 85 31 chr2 6757574 6757704 -246498879 - MIR3 SINE MIR -6 202 66 3041 285 105 23 chr2 6758739 6758858 -246497725 + L1MB7 LINE L1 6 114 -6845 1868 148 65 0 chr2 6758858 6759149 -246497434 - AluSx SINE Alu -2 310 1 3041 285 105 23 chr2 6759149 6761250 -246495333 + L1MB7 LINE L1 114 2405 -4554 206 260 0 0 chr2 6761318 6761368 -246495215 + (TA)n Simple_repeat Simple_repeat 2 51 0 355 325 0 0 chr2 6761434 6761548 -246495035 - L1M4b LINE L1 -5344 1515 1402 2239 244 89 36 chr2 6761652 6762172 -246494411 + L1MB7 LINE L1 2560 3051 -3906 352 81 16 16 chr2 6762172 6762234 -246494349 + (TA)n Simple_repeat Simple_repeat 1 62 0 2239 244 89 36 chr2 6762234 6763133 -246493450 + L1MB7 LINE L1 3051 3999 -2958 1157 181 43 27 chr2 6763140 6763439 -246493144 + L1MA7 LINE L1 5988 6291 0 5193 229 77 26 chr2 6763468 6764843 -246491740 + L1MB7 LINE L1 4016 5319 -1676 234 0 0 0 chr2 6764843 6764869 -246491714 + (TC)n Simple_repeat Simple_repeat 1 26 0 * 240 100 0 0 chr2 6764868 6764908 -246491675 + (CA)n Simple_repeat Simple_repeat 1 40 0 5193 229 77 26 chr2 6764869 6766245 -246490338 + L1MB7 LINE L1 5319 6868 -127 3696 60 9 0 chr2 6766245 6766709 -246489874 - L1PA8 LINE L1 -4 6168 5701 358 196 0 0 chr2 6766709 6766801 -246489782 + L1MB8 LINE L1 6072 6163 -15 2091 155 63 24 chr2 6767047 6767460 -246489123 + MSTB1 LTR MaLR 4 432 0 24 0 0 0 chr2 6767902 6767926 -246488657 + AT_rich Low_complexity Low_complexity 1 24 0 198 314 65 46 chr2 6768275 6768428 -246488155 + MIR SINE MIR 81 236 -26 289 297 203 16 chr2 6768848 6769154 -246487429 - MLT1J1 LTR MaLR -24 422 60 207 0 0 0 chr2 6769412 6769435 -246487148 + (CA)n Simple_repeat Simple_repeat 2 24 0 216 0 0 0 chr2 6771028 6771052 -246485531 + (TC)n Simple_repeat Simple_repeat 1 24 0 * 252 0 0 0 chr2 6771051 6771079 -246485504 + (CA)n Simple_repeat Simple_repeat 1 28 0 195 42 0 0 chr2 6771078 6771102 -246485481 + (GA)n Simple_repeat Simple_repeat 2 25 0 * 23 0 0 0 chr2 6771684 6771707 -246484876 + AT_rich Low_complexity Low_complexity 1 23 0 2482 115 24 21 chr2 6772552 6772926 -246483657 + THE1C LTR MaLR 1 375 0 221 213 0 0 chr2 6775436 6775483 -246481100 + MER5B DNA MER1_type 130 176 -2 418 167 119 0 chr2 6775715 6775799 -246480784 + MER5A DNA MER1_type 13 106 -83 330 336 27 0 chr2 6775862 6775972 -246480611 + MER5B DNA MER1_type 1 113 -65 270 323 56 19 chr2 6778828 6778989 -246477594 + MIR SINE MIR 84 250 -12 * 756 318 25 8 chr2 6778933 6779178 -246477405 - MIR SINE MIR -6 256 8 1427 213 23 0 chr2 6779623 6779928 -246476655 - AluJo SINE Alu 0 312 1 248 367 92 0 chr2 6782026 6782135 -246474448 - L2 LINE L2 -1 3271 3153 507 305 46 6 chr2 6782774 6782948 -246473635 - MIR SINE MIR -16 246 66 290 237 237 5 chr2 6783395 6783614 -246472969 + LTR50 LTR ERVL 8 277 -518 436 243 221 30 chr2 6783668 6783931 -246472652 + LTR33A LTR ERVL 328 519 -4 1368 155 91 16 chr2 6784265 6784517 -246472066 - AluJb SINE Alu -16 296 26 349 278 0 0 chr2 6785156 6785228 -246471355 - MIR SINE MIR -92 116 45 752 258 42 24 chr2 6785321 6785383 -246471200 - MER58A DNA MER1_type -2203 217 158 2540 122 53 26 chr2 6785383 6785800 -246470783 - MSTA LTR MaLR 0 428 1 752 258 42 24 chr2 6785800 6785950 -246470633 - MER58A DNA MER1_type -2262 158 1 559 326 80 37 chr2 6785987 6786389 -246470194 - MLT1J LTR MaLR -57 454 36 191 111 0 0 chr2 6786649 6786676 -246469907 + MIR SINE MIR 118 144 -118 958 188 17 59 chr2 6788362 6788601 -246467982 + MSTB2 LTR MaLR 229 457 0 1243 197 55 108 chr2 6788647 6789028 -246467555 + MLT1A1 LTR MaLR 1 361 -4 244 361 56 13 chr2 6789739 6789879 -246466704 + MIR SINE MIR 16 155 -53 21 36 0 0 chr2 6790073 6790101 -246466482 + AT_rich Low_complexity Low_complexity 1 28 0 336 48 0 0 chr2 6790248 6790290 -246466293 + (GA)n Simple_repeat Simple_repeat 1 42 0 195 69 0 0 chr2 6793831 6793860 -246462723 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 198 316 93 14 chr2 6793987 6794126 -246462457 + L2 LINE L2 2672 2821 -493 31 44 0 0 chr2 6794803 6794848 -246461735 + AT_rich Low_complexity Low_complexity 1 45 0 434 303 35 40 chr2 6795465 6795599 -246460984 - L1ME LINE L1 -404 5717 5583 2130 189 18 10 chr2 6795599 6795986 -246460597 + MLT1B LTR MaLR 1 390 0 434 303 35 40 chr2 6795986 6796049 -246460534 - L1ME LINE L1 -538 5583 5521 1976 162 40 30 chr2 6796854 6797225 -246459358 + THE1C LTR MaLR 1 375 0 21 57 0 0 chr2 6797257 6797292 -246459291 + AT_rich Low_complexity Low_complexity 1 35 0 200 382 35 18 chr2 6797475 6797645 -246458938 + L2 LINE L2 2828 3000 -272 22 35 0 0 chr2 6797930 6797959 -246458624 + AT_rich Low_complexity Low_complexity 1 29 0 1820 226 11 6 chr2 6798025 6798388 -246458195 + MLT1A1 LTR MaLR 1 365 0 258 294 16 16 chr2 6798780 6798906 -246457677 + (TA)n Simple_repeat Simple_repeat 2 127 0 290 277 47 84 chr2 6799908 6800121 -246456462 + MIR SINE MIR 8 212 -50 1757 165 92 9 chr2 6800240 6800556 -246456027 + MER2 DNA MER2_type 2 343 -1 26 0 0 0 chr2 6801107 6801133 -246455450 + AT_rich Low_complexity Low_complexity 1 26 0 243 269 222 9 chr2 6801274 6801382 -246455201 + MIR SINE MIR 48 178 -84 4799 131 1 16 chr2 6801418 6802146 -246454437 - L1PA13 LINE L1 0 6163 5447 231 313 100 96 chr2 6802365 6802667 -246453916 - L2 LINE L2 -9 3304 2998 912 230 0 0 chr2 6802667 6802828 -246453755 + FRAM SINE Alu 1 161 -5 231 313 100 96 chr2 6802828 6803005 -246453578 - L2 LINE L2 -315 2998 2823 189 403 32 13 chr2 6803045 6803199 -246453384 - L2 LINE L2 -602 2712 2556 2137 130 0 3 chr2 6803804 6804112 -246452471 + AluSx SINE Alu 6 312 0 21 57 0 0 chr2 6804908 6804943 -246451640 + AT_rich Low_complexity Low_complexity 1 35 0 316 240 34 6 chr2 6805000 6805175 -246451408 + A-rich Low_complexity Low_complexity 1 180 0 4993 177 25 6 chr2 6805419 6806311 -246450272 + MER49 LTR ERV1 8 916 -7 213 65 0 0 chr2 6806895 6806926 -246449657 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 353 162 0 14 chr2 6807496 6807570 -246449013 + GA-rich Low_complexity Low_complexity 4 76 0 398 255 10 10 chr2 6807803 6807901 -246448682 - MIR SINE MIR -118 144 47 242 281 88 44 chr2 6808525 6808639 -246447944 - MIR SINE MIR -74 188 70 21 0 0 0 chr2 6809121 6809142 -246447441 + AT_rich Low_complexity Low_complexity 1 21 0 1196 182 0 85 chr2 6809185 6809443 -246447140 + AluJo SINE Alu 1 236 -76 1924 153 22 26 chr2 6810135 6810489 -246446094 + MLT2A2 LTR ERVL 3 309 -144 1169 133 0 6 chr2 6810579 6810760 -246445823 + MLT2A2 LTR ERVL 274 453 0 2392 50 0 3 chr2 6811747 6812053 -246444530 + AluY SINE Alu 1 305 0 416 322 94 59 chr2 6812307 6812763 -246443820 - MLT1K LTR MaLR 0 588 117 2253 96 0 3 chr2 6814237 6814530 -246442053 - AluY SINE Alu -19 292 1 2019 67 8 4 chr2 6815167 6815420 -246441163 - L1PA7 LINE L1 0 6154 5901 292 264 33 0 chr2 6815442 6815533 -246441050 - MER5A DNA MER1_type -95 94 1 246 62 0 0 chr2 6815680 6815712 -246440871 + (A)n Simple_repeat Simple_repeat 1 32 0 365 200 109 0 chr2 6816893 6817003 -246439580 - MER20 DNA MER1_type -95 124 3 1364 132 80 0 chr2 6817009 6817222 -246439361 + MER30 DNA MER1_type 1 230 0 216 194 45 0 chr2 6817315 6817449 -246439134 + (TG)n Simple_repeat Simple_repeat 2 141 0 218 191 23 30 chr2 6817536 6817667 -246438916 + (TG)n Simple_repeat Simple_repeat 2 131 0 541 150 22 28 chr2 6817678 6817858 -246438725 + (TG)n Simple_repeat Simple_repeat 1 179 0 431 204 39 6 chr2 6817880 6818197 -246438386 + (TG)n Simple_repeat Simple_repeat 1 327 0 188 339 73 24 chr2 6819051 6819102 -246437481 + MIR SINE MIR 101 148 -114 234 62 0 0 chr2 6819102 6819134 -246437449 + (TAA)n Simple_repeat Simple_repeat 1 32 0 188 339 73 24 chr2 6819134 6819206 -246437377 + MIR SINE MIR 148 230 -32 201 156 0 0 chr2 6820639 6820671 -246435912 + CT-rich Low_complexity Low_complexity 2 33 0 33 0 0 0 chr2 6821110 6821143 -246435440 + AT_rich Low_complexity Low_complexity 1 33 0 499 281 31 40 chr2 6823240 6823485 -246433098 - MIR SINE MIR -15 247 4 2255 101 3 0 chr2 6823727 6824014 -246432569 + AluSc SINE Alu 1 288 -21 25 51 0 0 chr2 6824827 6824866 -246431717 + AT_rich Low_complexity Low_complexity 1 39 0 1958 133 3 7 chr2 6824916 6825201 -246431382 + MER1B DNA MER1_type 43 326 -13 3617 255 115 52 chr2 6825252 6827351 -246429232 - Charlie7 DNA MER1_type -139 2473 243 1845 185 25 33 chr2 6827705 6828072 -246428511 - MLT1A1 LTR MaLR 0 365 2 263 361 31 0 chr2 6828581 6828711 -246427872 - MIR SINE MIR -50 212 79 229 320 82 0 chr2 6829327 6829449 -246427134 + MIR SINE MIR 76 207 -55 183 190 40 20 chr2 6830083 6830183 -246426400 + (CA)n Simple_repeat Simple_repeat 1 102 0 386 218 45 0 chr2 6830203 6830359 -246426224 + (CA)n Simple_repeat Simple_repeat 1 163 0 2129 195 20 66 chr2 6832856 6832906 -246423677 - MLT2B1 LTR ERVL -2 518 467 2424 123 22 6 chr2 6832906 6833264 -246423319 + THE1B LTR MaLR 1 364 0 2129 195 20 66 chr2 6833264 6833280 -246423303 - MLT2B1 LTR ERVL -53 467 452 512 43 29 0 chr2 6833280 6833350 -246423233 + (TAGA)n Simple_repeat Simple_repeat 2 73 0 2129 195 20 66 chr2 6833350 6833825 -246422758 - MLT2B1 LTR ERVL -68 452 1 2313 161 67 7 chr2 6834079 6834483 -246422100 + MSTA LTR MaLR 1 428 0 2040 179 82 131 chr2 6835200 6835961 -246420622 + LTR8A LTR ERV1 1 723 -4 1132 215 99 52 chr2 6836016 6836600 -246419983 + LTR48B LTR ERV1 1 644 0 448 270 68 0 chr2 6836633 6836781 -246419802 - MIR SINE MIR -101 161 4 24 0 0 0 chr2 6836928 6836952 -246419631 + AT_rich Low_complexity Low_complexity 1 24 0 1768 154 89 17 chr2 6837093 6837443 -246419140 + THE1C LTR MaLR 1 375 0 257 254 167 7 chr2 6838832 6838970 -246417613 + MIR SINE MIR 100 259 -3 300 296 57 0 chr2 6838994 6839082 -246417501 + MIR SINE MIR 91 183 -79 1789 162 6 34 chr2 6839128 6839449 -246417134 + AluJb SINE Alu 1 312 0 1493 127 18 9 chr2 6839449 6839825 -246416758 + AluSc SINE Alu 81 461 0 253 318 76 23 chr2 6841727 6841859 -246414724 + MIR SINE MIR 5 143 -119 410 264 47 27 chr2 6843036 6843184 -246413399 - MIR SINE MIR -47 215 65 257 217 87 0 chr2 6843238 6843307 -246413276 - MIR SINE MIR -70 192 118 231 291 13 0 chr2 6843465 6843544 -246413039 - MIR3 SINE MIR -5 203 124 653 224 22 49 chr2 6843660 6843843 -246412740 + MER58C DNA MER1_type 38 215 0 30 0 0 0 chr2 6843904 6843934 -246412649 + AT_rich Low_complexity Low_complexity 1 30 0 225 353 17 8 chr2 6843957 6844076 -246412507 + MER5B DNA MER1_type 54 173 -5 369 277 13 43 chr2 6847095 6847180 -246409403 + L1ME LINE L1 5510 5565 -556 1916 145 35 0 chr2 6847180 6847469 -246409114 - AluSx SINE Alu -13 299 1 369 277 13 43 chr2 6847469 6847540 -246409043 + L1ME LINE L1 5565 5637 -484 2289 217 39 41 chr2 6847569 6848229 -246408354 + L1M4c LINE L1 1238 1896 -4488 1547 103 0 0 chr2 6848235 6848429 -246408154 + AluSq SINE Alu 1 194 -119 2099 100 3 17 chr2 6848980 6849269 -246407314 - AluSg SINE Alu -23 287 3 1233 154 43 39 chr2 6849335 6849569 -246407014 - AluJo SINE Alu -23 289 55 306 0 0 0 chr2 6850290 6850324 -246406259 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 564 242 62 36 chr2 6851568 6851762 -246404821 + MIR SINE MIR 63 261 -1 332 333 39 6 chr2 6852850 6853030 -246403553 + MERVL LTR ERVL 2314 2499 -2986 1658 140 89 24 chr2 6853057 6853350 -246403233 + AluSx SINE Alu 1 312 0 1587 204 18 15 chr2 6853758 6854101 -246402482 + Tigger1 DNA MER2_type 1 344 -2074 416 333 75 5 chr2 6855111 6855324 -246401259 - MIR SINE MIR -25 237 10 225 0 0 0 chr2 6855809 6855834 -246400749 + (T)n Simple_repeat Simple_repeat 1 25 0 2295 134 35 13 chr2 6856124 6856519 -246400064 - Tigger1 DNA MER2_type 0 2418 2015 264 185 92 0 chr2 6856493 6856557 -246400026 - Tigger1 DNA MER2_type -1934 484 415 2237 107 12 9 chr2 6856557 6856885 -246399698 + THE1A LTR MaLR 1 329 -26 410 100 0 133 chr2 6856985 6857075 -246399508 + AluSg/x SINE Alu 216 293 -17 381 197 174 76 chr2 6858175 6858307 -246398276 - MER5A DNA MER1_type -32 157 13 193 314 128 0 chr2 6858646 6858732 -246397851 - MIR SINE MIR -64 144 48 22 0 0 0 chr2 6859536 6859558 -246397025 + AT_rich Low_complexity Low_complexity 1 22 0 2690 34 0 0 chr2 6859596 6859892 -246396691 - AluY SINE Alu -15 296 1 3305 145 41 38 chr2 6860490 6861003 -246395580 - L1MB2 LINE L1 -270 5901 5384 2367 99 3 0 chr2 6861003 6861305 -246395278 - AluSg SINE Alu -7 303 1 3305 145 41 38 chr2 6861305 6861431 -246395152 - L1MB2 LINE L1 -787 5384 5260 780 172 90 0 chr2 6861431 6861576 -246395007 - AluJb SINE Alu -9 303 146 1670 158 0 28 chr2 6861583 6861868 -246394715 - AluJb SINE Alu -23 289 13 910 239 18 5 chr2 6861872 6862094 -246394489 - L1MB2 LINE L1 -871 5275 5051 730 285 6 6 chr2 6862677 6862856 -246393727 - LTR28 LTR ERV1 -841 179 1 2401 241 41 58 chr2 6862903 6863038 -246393545 + L1M1 LINE L1 17 153 -7412 2542 36 3 10 chr2 6863038 6863345 -246393238 - AluYa5 SINE Alu -6 305 1 2401 241 41 58 chr2 6863345 6863945 -246392638 + L1M1 LINE L1 153 739 -6826 2522 227 39 9 chr2 6864059 6864701 -246391882 + L1MB5 LINE L1 5513 6173 -1 314 28 0 0 chr2 6865100 6865136 -246391447 + (TG)n Simple_repeat Simple_repeat 2 37 0 554 316 81 61 chr2 6866002 6866395 -246390188 + L3 LINE CR1 1079 1479 -98 1281 147 44 5 chr2 6867468 6867672 -246388911 + AluJb SINE Alu 1 212 -100 2249 112 3 0 chr2 6867672 6867968 -246388615 - AluSx SINE Alu -15 297 1 2118 125 3 3 chr2 6868587 6868884 -246387699 - AluSx SINE Alu -15 297 1 1262 204 91 18 chr2 6869527 6869802 -246386781 - AluJb SINE Alu -17 295 1 2131 86 47 0 chr2 6869941 6870219 -246386364 - AluSq SINE Alu -22 291 1 24 0 0 0 chr2 6870648 6870672 -246385911 + AT_rich Low_complexity Low_complexity 1 24 0 5543 60 7 3 chr2 6871097 6871816 -246384767 - L1PA4 LINE L1 -180 5975 5254 5252 71 4 3 chr2 6871823 6872523 -246384060 + L1P LINE L1 3888 4588 -1558 2160 96 20 20 chr2 6872860 6873161 -246383422 + AluSc SINE Alu 1 301 -8 1090 165 0 0 chr2 6873162 6873332 -246383251 + AluSg/x SINE Alu 133 302 -8 245 230 203 0 chr2 6873812 6873886 -246382697 + MLT1I LTR MaLR 223 311 -244 1460 68 16 5 chr2 6874035 6874226 -246382357 + AluY SINE Alu 103 295 -16 1547 180 34 24 chr2 6874852 6875147 -246381436 + AluJo SINE Alu 1 298 -14 897 265 32 13 chr2 6875150 6875459 -246381124 + L1M4 LINE L1 2209 2523 -3623 357 337 32 16 chr2 6875794 6875981 -246380602 - MLT1D-int LTR MaLR -490 881 692 2380 240 18 44 chr2 6876098 6876777 -246379806 - MLT1D-int LTR MaLR -710 661 1 1100 204 134 41 chr2 6876779 6877111 -246379472 - MLT1D LTR MaLR -2 503 150 1305 181 31 14 chr2 6877145 6877438 -246379145 - AluSx SINE Alu -9 303 6 505 103 0 51 chr2 6877760 6877838 -246378745 - AluJo SINE Alu -17 295 222 771 166 0 58 chr2 6877908 6878047 -246378536 + FLAM_C SINE Alu 1 131 -2 2288 110 0 3 chr2 6878235 6878545 -246378038 - AluSc SINE Alu 0 309 1 1171 150 87 5 chr2 6878563 6878770 -246377813 - AluJo SINE Alu -88 224 1 556 296 38 47 chr2 6880055 6880372 -246376211 + MER90 LTR ERV1 77 390 -185 677 244 43 82 chr2 6880410 6880738 -246375845 + L1M4 LINE L1 24 338 -6204 296 215 108 46 chr2 6881499 6881629 -246374954 + MIR SINE MIR 88 225 -37 2068 133 10 0 chr2 6881795 6882089 -246374494 - AluSg SINE Alu -13 297 1 40 67 0 0 chr2 6882180 6882255 -246374328 + AT_rich Low_complexity Low_complexity 1 75 0 306 253 0 0 chr2 6883139 6883218 -246373365 + MLT1I LTR MaLR 317 395 -14 236 169 135 34 chr2 6884864 6884953 -246371630 - L1PA11 LINE L1 0 6174 6077 2066 197 163 27 chr2 6884955 6885057 -246371526 - Charlie1 DNA MER1_type -353 2408 2321 2323 103 3 6 chr2 6885057 6885369 -246371214 - AluSx SINE Alu -1 311 1 2066 197 163 27 chr2 6885369 6885561 -246371022 - Charlie1 DNA MER1_type -440 2321 2157 2150 140 3 3 chr2 6885561 6885868 -246370715 - AluSx SINE Alu -5 307 1 2066 197 163 27 chr2 6885868 6886067 -246370516 - Charlie1 DNA MER1_type -604 2157 1987 2073 122 10 16 chr2 6886067 6886378 -246370205 - AluSx SINE Alu -3 309 1 2066 197 163 27 chr2 6886378 6886556 -246370027 - Charlie1 DNA MER1_type -774 1987 1643 259 154 0 0 chr2 6886657 6886696 -246369887 - Alu SINE Alu -261 39 1 314 262 267 11 chr2 6886931 6887109 -246369474 + MIR SINE MIR 4 228 -34 794 250 65 22 chr2 6887161 6887393 -246369190 + MIR SINE MIR 20 261 -1 220 214 61 102 chr2 6887426 6887482 -246369101 + MIR SINE MIR 158 215 -47 1853 163 3 0 chr2 6887482 6887764 -246368819 + AluSx SINE Alu 1 283 -29 198 0 0 0 chr2 6887765 6887787 -246368796 + (TTAA)n Simple_repeat Simple_repeat 4 25 0 220 214 61 102 chr2 6887787 6887826 -246368757 + MIR SINE MIR 214 251 -11 351 330 80 14 chr2 6888956 6889168 -246367415 + MIR SINE MIR 29 254 -8 2228 107 10 0 chr2 6889232 6889523 -246367060 - AluSq SINE Alu -19 294 1 2263 118 0 0 chr2 6890201 6890507 -246366076 - AluSx SINE Alu -6 306 1 2206 123 3 0 chr2 6892096 6892404 -246364179 - AluSx SINE Alu -3 309 1 192 97 0 0 chr2 6892964 6892995 -246363588 + (CAGAGA)n Simple_repeat Simple_repeat 1 31 0 2357 97 0 0 chr2 6893006 6893305 -246363278 - AluSg SINE Alu -11 299 1 24 67 0 0 chr2 6894045 6894090 -246362493 + AT_rich Low_complexity Low_complexity 1 45 0 1725 181 9 17 chr2 6894091 6894440 -246362143 - L1MA5 LINE L1 -174 6126 5781 2338 94 3 0 chr2 6894442 6894740 -246361843 - AluSx SINE Alu -13 299 1 530 309 87 17 chr2 6894882 6895112 -246361471 + MIR SINE MIR 14 259 -3 207 282 42 0 chr2 6895260 6895331 -246361252 + (TATATG)n Simple_repeat Simple_repeat 3 76 0 1345 148 145 28 chr2 6895592 6895916 -246360667 + L1MB5 LINE L1 5813 6174 0 248 252 84 37 chr2 6896077 6896184 -246360399 - L2 LINE L2 -862 2452 2341 408 214 143 9 chr2 6896366 6896478 -246360105 - MER94 DNA DNA -1 133 7 206 319 0 14 chr2 6896706 6896775 -246359808 - L3 LINE CR1 -1 1576 1509 23 0 0 0 chr2 6897743 6897766 -246358817 + AT_rich Low_complexity Low_complexity 1 23 0 43 20 0 0 chr2 6898241 6898291 -246358292 + AT_rich Low_complexity Low_complexity 1 50 0 2484 86 0 0 chr2 6899778 6900091 -246356492 + AluSq SINE Alu 1 313 0 760 289 50 11 chr2 6900104 6900384 -246356199 + HAL1 LINE L1 1637 1927 -580 530 281 105 4 chr2 6900620 6900848 -246355735 + HAL1 LINE L1 2050 2300 -207 25 0 0 0 chr2 6901622 6901647 -246354936 + AT_rich Low_complexity Low_complexity 1 25 0 2463 84 0 3 chr2 6902141 6902451 -246354132 + AluY SINE Alu 1 309 -2 249 161 0 54 chr2 6904917 6904973 -246351610 - MER5B DNA MER1_type 0 178 126 2092 136 10 3 chr2 6904982 6905292 -246351291 + AluSx SINE Alu 1 312 0 1333 143 39 54 chr2 6906312 6906592 -246349991 - AluJo SINE Alu -4 308 33 325 277 195 56 chr2 6906986 6907158 -246349425 - L1M2 LINE L1 -5446 1403 1256 182 36 0 36 chr2 6907158 6907186 -246349397 + (CCCTG)n Simple_repeat Simple_repeat 4 30 0 325 277 195 56 chr2 6907186 6907496 -246349087 - L1M2 LINE L1 -5593 1256 854 2497 30 40 0 chr2 6907792 6908088 -246348495 + AluY SINE Alu 1 308 -3 259 253 148 44 chr2 6908725 6908907 -246347676 - L2 LINE L2 -467 2847 2647 233 333 10 30 chr2 6910178 6910277 -246346306 + MIR3 SINE MIR 78 174 -34 253 331 37 22 chr2 6910753 6910889 -246345694 - MIR SINE MIR -77 185 48 205 318 27 87 chr2 6910897 6911196 -246345387 - L2 LINE L2 -82 3190 2910 2499 77 0 0 chr2 6911923 6912234 -246344349 - AluY SINE Alu 0 311 1 718 223 99 21 chr2 6914940 6915173 -246341410 - MLT1C LTR MaLR -213 254 4 180 77 0 0 chr2 6915181 6915207 -246341376 + (CA)n Simple_repeat Simple_repeat 1 26 0 335 256 116 43 chr2 6915275 6915531 -246341052 - MLT1L LTR MaLR -7 608 235 313 246 25 68 chr2 6915904 6916022 -246340561 + L2 LINE L2 3156 3268 -4 180 296 0 0 chr2 6916471 6916515 -246340068 - L2 LINE L2 -12 3301 3258 1155 196 107 0 chr2 6916911 6917181 -246339402 + MER33 DNA MER1_type 5 303 -21 184 286 131 12 chr2 6917579 6917663 -246338920 + L2 LINE L2 2519 2612 -702 21 36 0 0 chr2 6918801 6918829 -246337754 + AT_rich Low_complexity Low_complexity 1 28 0 256 176 14 14 chr2 6919834 6919908 -246336675 + (TA)n Simple_repeat Simple_repeat 1 74 0 1924 163 0 7 chr2 6919909 6920204 -246336379 - AluJb SINE Alu -19 293 1 186 324 9 72 chr2 6920563 6920674 -246335909 + MIR SINE MIR 105 208 -54 2233 247 40 16 chr2 6920991 6921724 -246334859 - L1M4 LINE L1 -3250 2896 2147 22 0 0 0 chr2 6922984 6923006 -246333577 + AT_rich Low_complexity Low_complexity 1 22 0 665 281 85 68 chr2 6923042 6923700 -246332883 - L1MC4a LINE L1 -1885 5923 5255 262 214 306 0 chr2 6924084 6924182 -246332401 + MIR SINE MIR 15 142 -120 701 289 100 39 chr2 6924279 6924719 -246331864 + L2 LINE L2 438 904 -2410 221 279 132 37 chr2 6924719 6924855 -246331728 + L2 LINE L2 2051 2199 -1115 245 291 35 64 chr2 6925202 6925343 -246331240 + L2 LINE L2 2435 2571 -743 340 283 168 29 chr2 6925438 6925611 -246330972 + L2 LINE L2 2960 3156 -157 245 233 0 23 chr2 6925611 6925697 -246330886 + (CATA)n Simple_repeat Simple_repeat 4 87 0 378 0 0 0 chr2 6926153 6926195 -246330388 + (TG)n Simple_repeat Simple_repeat 2 43 0 233 0 62 0 chr2 6927535 6927567 -246329016 + (TCCCC)n Simple_repeat Simple_repeat 2 35 0 2391 78 10 0 chr2 6927567 6927862 -246328721 - AluSq SINE Alu -15 298 1 4578 205 40 24 chr2 6927872 6929653 -246326930 - L1MB7 LINE L1 -1 6419 4619 394 290 120 4 chr2 6929646 6929922 -246326661 - L1MB7 LINE L1 -3898 2486 2179 * 196 247 124 21 chr2 6930756 6930853 -246325730 - L2 LINE L2 -4 3268 3162 428 273 132 18 chr2 6931006 6931435 -246325148 - L2 LINE L2 -219 3094 2615 1628 297 163 31 chr2 6931702 6932018 -246324565 - L2 LINE L2 -653 2661 2388 2200 112 0 0 chr2 6932018 6932303 -246324280 + AluSq SINE Alu 1 285 -28 1628 297 163 31 chr2 6932303 6933577 -246323006 - L2 LINE L2 -926 2388 861 195 42 0 0 chr2 6934311 6934335 -246322248 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2037 232 142 79 chr2 6935407 6936849 -246319734 + Charlie2a DNA MER1_type 1079 2611 -251 278 281 31 23 chr2 6936913 6937041 -246319542 + Charlie2a DNA MER1_type 2718 2846 -16 191 371 95 0 chr2 6937803 6937908 -246318675 - MIR SINE MIR -60 148 34 231 114 0 0 chr2 6938690 6938725 -246317858 + (TCCCC)n Simple_repeat Simple_repeat 4 38 0 25 0 0 0 chr2 6939137 6939162 -246317421 + AT_rich Low_complexity Low_complexity 1 25 0 213 171 24 0 chr2 6939243 6939284 -246317299 + (TTA)n Simple_repeat Simple_repeat 2 43 0 1414 277 110 76 chr2 6939638 6942459 -246314124 - L1ME3 LINE L1 -290 5876 2892 2205 99 0 7 chr2 6942459 6942752 -246313831 + AluSq SINE Alu 1 291 -22 1414 277 110 76 chr2 6942752 6943432 -246313151 - L1ME3 LINE L1 -3274 2892 2237 1599 228 40 33 chr2 6948754 6949179 -246307404 - MSTC LTR MaLR 0 428 1 216 97 0 0 chr2 6950273 6950304 -246306279 + (TG)n Simple_repeat Simple_repeat 2 32 0 1514 223 66 85 chr2 6951242 6951866 -246304717 - LTR9 LTR ERV1 0 612 1 215 267 0 33 chr2 6952951 6953011 -246303572 + CT-rich Low_complexity Low_complexity 5 62 0 6920 31 8 0 chr2 6953491 6954295 -246302288 + L1PA3 LINE L1 5344 6153 -2 564 230 129 42 chr2 6956826 6957113 -246299470 + LTR16C LTR ERVL 180 491 0 1867 180 22 65 chr2 6958494 6958895 -246297688 + MLT1B LTR MaLR 1 384 -6 1657 153 65 48 chr2 6958907 6959076 -246297507 + MER46B DNA MER2_type 1 166 -2565 2261 94 10 0 chr2 6959076 6959375 -246297208 - AluY SINE Alu -9 302 1 1657 153 65 48 chr2 6959375 6959462 -246297121 + MER46B DNA MER2_type 166 143 -2588 2314 119 19 35 chr2 6959462 6959832 -246296751 + THE1B LTR MaLR 1 364 0 1657 153 65 48 chr2 6959832 6959926 -246296657 + MER46B DNA MER2_type 142 233 -3 287 314 44 0 chr2 6959929 6960066 -246296517 - MIR SINE MIR -108 154 12 565 254 38 34 chr2 6962253 6962462 -246294121 + MIR SINE MIR 15 224 -38 901 254 28 0 chr2 6963053 6963270 -246293313 + MER58A DNA MER1_type 2 224 0 497 226 161 30 chr2 6963612 6963842 -246292741 + MIR SINE MIR 3 262 0 24 0 0 0 chr2 6964149 6964173 -246292410 + AT_rich Low_complexity Low_complexity 1 24 0 2026 131 66 26 chr2 6964370 6964720 -246291863 - THE1B LTR MaLR 0 364 1 1779 174 0 10 chr2 6964856 6965155 -246291428 + AluJb SINE Alu 1 296 -16 1327 256 125 17 chr2 6965195 6965676 -246290907 - L1MC4a LINE L1 -1883 5925 5393 189 136 16 56 chr2 6965873 6965998 -246290585 + (TA)n Simple_repeat Simple_repeat 1 120 0 270 294 59 54 chr2 6966253 6966518 -246290065 - L1MC/D LINE L1 -446 5675 5444 225 356 8 0 chr2 6966519 6966637 -246289946 - MIR SINE MIR -57 151 33 317 267 50 69 chr2 6967006 6967208 -246289375 - L2 LINE L2 -5 3308 3111 299 343 20 0 chr2 6969030 6969132 -246287451 + MIR SINE MIR 47 150 -112 1599 164 60 38 chr2 6969140 6969505 -246287078 - THE1C LTR MaLR 0 375 3 9681 130 12 38 chr2 6969507 6971127 -246285456 - THE1C-int LTR MaLR 0 1580 3 1756 151 37 45 chr2 6971129 6971507 -246285076 - THE1C LTR MaLR 0 375 1 462 303 77 27 chr2 6973114 6973375 -246283208 + L2 LINE L2 2372 2645 -669 360 313 28 33 chr2 6973420 6973602 -246282981 + L2 LINE L2 3094 3274 -39 2452 90 0 3 chr2 6973606 6973917 -246282666 - AluSg SINE Alu 0 310 1 180 0 0 0 chr2 6974586 6974606 -246281977 + (T)n Simple_repeat Simple_repeat 1 20 0 2342 83 0 7 chr2 6974986 6975286 -246281297 - AluY SINE Alu -13 298 1 234 327 27 9 chr2 6975459 6975569 -246281014 - MIR SINE MIR -55 153 42 1660 212 87 2 chr2 6977480 6977895 -246278688 - L1MC3 LINE L1 -28 7757 7308 243 197 57 90 chr2 6978014 6978136 -246278447 - MLT1F1 LTR MaLR -437 130 13 3414 208 91 26 chr2 6978162 6979183 -246277400 - L1MC3 LINE L1 -947 7048 5893 590 217 71 11 chr2 6979198 6979382 -246277201 - L1MC1 LINE L1 -5 6328 6134 1028 205 29 29 chr2 6979389 6979662 -246276921 - MLT1A2 LTR MaLR -5 369 97 348 24 0 0 chr2 6979698 6979739 -246276844 + (CA)n Simple_repeat Simple_repeat 2 42 0 287 78 69 29 chr2 6979743 6979845 -246276738 + (TA)n Simple_repeat Simple_repeat 1 106 0 297 0 0 0 chr2 6979860 6979893 -246276690 + (CA)n Simple_repeat Simple_repeat 2 34 0 225 240 133 27 chr2 6979919 6979994 -246276589 - MLT1A2 LTR MaLR -304 86 4 2620 174 30 8 chr2 6979994 6980524 -246276059 - L1MC1 LINE L1 -196 6137 5590 397 296 18 41 chr2 6980865 6981034 -246275549 + MIR SINE MIR 67 231 -31 331 135 29 144 chr2 6981045 6981149 -246275434 - L1MC4 LINE L1 -1341 6981 1980 598 257 27 48 chr2 6981478 6981665 -246274918 - MER5A DNA MER1_type 0 189 7 205 315 36 45 chr2 6983323 6983434 -246273149 - MIR SINE MIR -97 111 2 2011 156 77 31 chr2 6984653 6985168 -246271415 - MLT2A2 LTR ERVL 0 554 1 339 263 135 0 chr2 6985181 6985314 -246271269 - MIR SINE MIR -14 248 98 1902 105 4 8 chr2 6985800 6986058 -246270525 + AluSc SINE Alu 39 295 -14 1641 149 39 41 chr2 6987040 6987403 -246269180 + L1MA9 LINE L1 5950 6311 -1 198 263 100 50 chr2 6987770 6987850 -246268733 + L2 LINE L2 3169 3252 -20 310 229 280 8 chr2 6988863 6988981 -246267602 + MIR SINE MIR 20 169 -93 205 151 38 0 chr2 6990114 6990167 -246266416 + (TA)n Simple_repeat Simple_repeat 1 55 0 2483 88 0 0 chr2 6990308 6990614 -246265969 + AluSq SINE Alu 1 306 -7 225 0 73 24 chr2 6990632 6990673 -246265910 + (TAAAA)n Simple_repeat Simple_repeat 3 45 0 2076 153 0 0 chr2 6990687 6990988 -246265595 + AluJo SINE Alu 3 303 -9 442 256 125 57 chr2 6991119 6991295 -246265288 + MIR SINE MIR 49 236 -26 215 294 147 71 chr2 6991531 6991769 -246264814 - L2 LINE L2 0 3272 3017 461 212 30 0 chr2 6991906 6992005 -246264578 + Tigger3b DNA MER2_type 1 102 -1129 * 4199 130 50 84 chr2 6992003 6992994 -246263589 + Tigger3b DNA MER2_type 274 1231 0 261 256 60 51 chr2 6993257 6993374 -246263209 + MIR3 SINE MIR 52 169 -39 284 358 73 0 chr2 6999258 6999381 -246257202 - L2 LINE L2 -20 3252 3121 291 316 52 29 chr2 6999504 6999640 -246256943 - MIR SINE MIR -113 149 11 555 283 46 5 chr2 7000442 7000661 -246255922 - L1MA9 LINE L1 -38 6274 6047 298 372 141 5 chr2 7000723 7000914 -246255669 + MIR SINE MIR 25 241 -21 192 343 15 0 chr2 7001548 7001615 -246254968 - MIR SINE MIR -1 261 194 224 307 107 60 chr2 7002441 7002591 -246253992 - MIR SINE MIR -13 249 93 412 313 79 18 chr2 7003190 7003420 -246253163 + MIR SINE MIR 13 252 -10 299 192 0 0 chr2 7003534 7003586 -246252997 + L2 LINE L2 3261 3312 -1 505 95 0 0 chr2 7005347 7005421 -246251162 + FLAM_A SINE Alu 69 142 0 192 97 0 0 chr2 7006593 7006624 -246249959 + (T)n Simple_repeat Simple_repeat 1 31 0 581 246 102 60 chr2 7008215 7008430 -246248153 + MER58A DNA MER1_type 1 224 0 261 254 17 0 chr2 7010142 7010201 -246246382 - L2 LINE L2 -18 3295 3236 275 210 16 0 chr2 7011271 7011333 -246245250 + Charlie8 DNA MER1_type 102 164 -2253 494 286 17 17 chr2 7011869 7012044 -246244539 + MARNA DNA Mariner 177 351 -235 191 393 0 11 chr2 7012052 7012141 -246244442 - MIR SINE MIR -8 254 167 377 281 12 69 chr2 7012248 7012408 -246244175 - MIR SINE MIR 0 262 112 201 250 0 0 chr2 7013484 7013544 -246243039 + T-rich Low_complexity Low_complexity 1 60 0 429 277 50 0 chr2 7014106 7014225 -246242358 - MLT1B LTR MaLR -2 388 264 2139 133 7 0 chr2 7014681 7014990 -246241593 + AluSx SINE Alu 1 311 -1 222 194 0 104 chr2 7017712 7017779 -246238804 + MER5B DNA MER1_type 109 168 -10 456 19 0 0 chr2 7019544 7019597 -246236986 + (TG)n Simple_repeat Simple_repeat 2 54 0 3499 121 13 26 chr2 7019937 7020468 -246236115 - MER1A DNA MER1_type 0 527 4 385 305 68 28 chr2 7020545 7020722 -246235861 - L2 LINE L2 -9 3304 3121 270 288 62 27 chr2 7020693 7020839 -246235744 - L2 LINE L2 -445 2869 2719 * 315 303 63 0 chr2 7021088 7021230 -246235353 - MER58A DNA MER1_type -31 193 43 528 193 37 9 chr2 7021230 7021339 -246235244 + L1MB8 LINE L1 6060 6171 -7 1443 214 49 45 chr2 7021686 7022135 -246234448 - MLT1C LTR MaLR -16 451 1 359 262 104 0 chr2 7022422 7022654 -246233929 - MLT1G1 LTR MaLR -12 583 236 688 90 0 0 chr2 7023483 7023572 -246233011 + AluSg/x SINE Alu 206 294 -15 237 213 133 0 chr2 7024700 7024775 -246231808 + MER112 DNA MER1_type 145 229 -31 182 306 94 12 chr2 7026124 7026209 -246230374 + MIR3 SINE MIR 110 201 -7 285 252 37 47 chr2 7027266 7027373 -246229210 - MIR3 SINE MIR -6 202 97 214 314 0 29 chr2 7028095 7028165 -246228418 + GA-rich Low_complexity Low_complexity 4 71 0 * 812 213 26 6 chr2 7028145 7028460 -246228123 + (TGGA)n Simple_repeat Simple_repeat 1 321 0 432 171 0 0 chr2 7028476 7028558 -246228025 + (TGGA)n Simple_repeat Simple_repeat 3 84 0 767 154 15 12 chr2 7028580 7028849 -246227734 + (TGGA)n Simple_repeat Simple_repeat 1 270 0 758 148 11 33 chr2 7028867 7029050 -246227533 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 2370 101 0 0 chr2 7032367 7032674 -246223909 - AluSq SINE Alu -6 307 1 242 307 41 96 chr2 7034370 7034640 -246221943 - L2 LINE L2 -61 3211 2957 1632 209 64 9 chr2 7034788 7035224 -246221359 - MLT1C LTR MaLR -4 463 4 28 29 0 0 chr2 7036363 7036398 -246220185 + AT_rich Low_complexity Low_complexity 1 35 0 212 185 0 15 chr2 7036751 7036816 -246219767 + (TG)n Simple_repeat Simple_repeat 1 64 0 2452 92 45 0 chr2 7036821 7037156 -246219427 - THE1A LTR MaLR 0 355 6 204 296 17 43 chr2 7037862 7037977 -246218606 - MIR SINE MIR -76 186 75 180 315 19 0 chr2 7038769 7038823 -246217760 + L2 LINE L2 3218 3272 0 231 233 82 0 chr2 7039169 7039242 -246217341 + L3 LINE CR1 639 717 -860 2321 135 25 0 chr2 7039639 7039994 -246216589 + THE1B LTR MaLR 1 364 0 216 359 38 19 chr2 7040389 7040495 -246216088 - MIR SINE MIR -58 150 43 1655 108 0 0 chr2 7041111 7041323 -246215260 + AluSq SINE Alu 1 212 -101 231 250 76 22 chr2 7041832 7041924 -246214659 - MIR SINE MIR -74 188 92 216 0 0 0 chr2 7042343 7042367 -246214216 + (CA)n Simple_repeat Simple_repeat 2 25 0 405 227 62 0 chr2 7042679 7042776 -246213807 + MER5A DNA MER1_type 7 109 -80 1008 260 149 6 chr2 7042814 7043149 -246213434 - MLT1E LTR MaLR 0 593 211 2514 135 75 96 chr2 7043217 7043808 -246212775 + LTR18B LTR ERVL 1 578 -36 213 121 0 0 chr2 7043832 7043865 -246212718 + (CATATA)n Simple_repeat Simple_repeat 6 38 0 319 237 322 0 chr2 7043872 7043990 -246212593 - MLT1E LTR MaLR -435 158 3 368 237 0 0 chr2 7044070 7044146 -246212437 + MLT1A1 LTR MaLR 1 76 -289 873 173 73 21 chr2 7044173 7044364 -246212219 + MLT1A1 LTR MaLR 165 365 0 196 332 135 43 chr2 7044405 7045145 -246211438 + L2 LINE L2 1812 2619 -695 228 177 0 177 chr2 7045925 7046004 -246210579 + MLT1B LTR MaLR 1 65 -325 188 288 17 0 chr2 7046780 7046839 -246209744 + L2 LINE L2 3248 3307 -6 229 286 56 48 chr2 7046938 7047064 -246209519 + MIR SINE MIR 16 142 -66 974 255 92 28 chr2 7047897 7048427 -246208156 - L1MC5 LINE L1 -47 7914 7351 2376 85 3 0 chr2 7048570 7048863 -246207720 + AluY SINE Alu 1 294 -17 235 300 29 0 chr2 7049646 7049716 -246206867 + CT-rich Low_complexity Low_complexity 6 77 0 722 275 81 95 chr2 7051439 7051955 -246204628 - MLT1H LTR MaLR 0 549 41 210 71 0 0 chr2 7052002 7052030 -246204553 + (A)n Simple_repeat Simple_repeat 1 28 0 264 331 115 22 chr2 7052878 7053340 -246203243 - L2 LINE L2 -925 2389 1885 1651 185 51 48 chr2 7053358 7053753 -246202830 - MSTD LTR MaLR 0 396 1 389 325 0 0 chr2 7054568 7054685 -246201898 - MIR SINE MIR -5 257 141 231 121 0 0 chr2 7054930 7054963 -246201620 + MER31B LTR ERV1 1 33 -433 416 258 10 33 chr2 7054965 7055131 -246201452 + MER31A-int LTR ERV1 3082 3768 -2178 * 8284 177 50 44 chr2 7055110 7055584 -246200999 + MER31A-int LTR ERV1 3102 3572 -1364 2475 81 0 0 chr2 7055584 7055891 -246200692 - AluY SINE Alu -4 307 1 8284 177 50 44 chr2 7055891 7057221 -246199362 + MER31A-int LTR ERV1 3572 4916 -20 2397 159 24 50 chr2 7057221 7057719 -246198864 + MER31A LTR ERV1 1 485 0 311 294 137 0 chr2 7058471 7058617 -246197966 - MIR SINE MIR -78 184 19 217 336 0 28 chr2 7058967 7059110 -246197473 + CT-rich Low_complexity Low_complexity 4 142 0 1230 180 0 14 chr2 7059673 7059890 -246196693 - AluJb SINE Alu -13 299 86 1401 196 42 99 chr2 7059985 7060437 -246196146 + MLT1C LTR MaLR 1 424 -43 2377 96 0 3 chr2 7060437 7060740 -246195843 - AluSx SINE Alu -10 302 1 1401 196 42 99 chr2 7060740 7060782 -246195801 + MLT1C LTR MaLR 424 467 0 227 332 73 32 chr2 7060933 7061153 -246195430 + MIR SINE MIR 21 249 -13 1017 240 40 49 chr2 7061206 7061535 -246195048 + MLT2C1 LTR ERVL 6 331 -66 865 182 6 0 chr2 7061596 7061761 -246194822 + MLT1C-int LTR MaLR 22 187 -1184 * 957 221 103 0 chr2 7061758 7061962 -246194621 + MLT1C-int LTR MaLR 341 565 -806 249 301 170 20 chr2 7062112 7062265 -246194318 + L2 LINE L2 3097 3272 0 283 235 37 12 chr2 7062924 7063005 -246193578 + MER91B DNA MER1_type 57 139 -51 350 256 0 0 chr2 7063164 7063250 -246193333 - MIR SINE MIR -1 261 176 290 311 49 33 chr2 7064130 7064252 -246192331 + L2 LINE L2 3134 3257 -15 442 176 0 20 chr2 7064258 7064360 -246192223 + GA-rich Low_complexity Low_complexity 1 100 0 636 246 154 71 chr2 7064552 7064890 -246191693 - MLT1G3 LTR MaLR -42 488 123 893 216 98 98 chr2 7064894 7065253 -246191330 + MSTC LTR MaLR 1 412 -16 3013 81 0 3 chr2 7065698 7066083 -246190500 - L1PA7 LINE L1 -13 6141 5758 1225 196 56 49 chr2 7066754 7067060 -246189523 - MLT2B3 LTR ERVL 0 554 247 218 323 30 20 chr2 7069309 7069408 -246187175 - MIR SINE MIR -112 150 51 1446 205 32 46 chr2 7069521 7069891 -246186692 + MLT1A1 LTR MaLR 1 365 0 345 309 9 0 chr2 7070639 7070749 -246185834 + L2 LINE L2 3200 3310 -3 223 197 0 42 chr2 7070994 7071065 -246185518 + G-rich Low_complexity Low_complexity 2 69 0 1647 151 64 0 chr2 7072593 7072858 -246183725 + AluSx SINE Alu 1 282 -30 360 326 85 35 chr2 7074606 7074983 -246181600 + L1ME LINE L1 5429 5824 -297 423 229 14 25 chr2 7075373 7075514 -246181069 - MLT1G1 LTR MaLR -400 195 3 356 167 0 0 chr2 7075515 7075575 -246181008 - MER112 DNA MER1_type -193 67 8 297 257 112 26 chr2 7075927 7076079 -246180504 - L1ME LINE L1 -380 5741 5577 240 86 0 0 chr2 7078927 7078962 -246177621 + (CCTG)n Simple_repeat Simple_repeat 2 36 0 2089 257 84 55 chr2 7079287 7080519 -246176064 + L1ME2 LINE L1 3281 4683 -1463 349 83 0 0 chr2 7080519 7080567 -246176016 - MADE1 DNA Mariner 0 80 33 2089 257 84 55 chr2 7080567 7080677 -246175906 + L1ME2 LINE L1 4683 4788 -1358 1119 236 24 39 chr2 7080685 7081016 -246175567 + MER58B DNA MER1_type 1 326 -15 1339 266 65 49 chr2 7081031 7082186 -246174397 + L1ME2 LINE L1 4791 5921 -243 1520 102 56 0 chr2 7082186 7082402 -246174181 + MER30 DNA MER1_type 3 230 0 1339 266 65 49 chr2 7082402 7082511 -246174072 + L1ME2 LINE L1 5921 6027 -137 1018 216 112 75 chr2 7082725 7083100 -246173483 + MLT1B LTR MaLR 2 390 0 893 196 30 0 chr2 7083142 7083310 -246173273 - MER58B DNA MER1_type -1 340 168 2777 241 51 12 chr2 7083672 7084591 -246171992 + L1PA12 LINE L1 2254 3146 -4438 12280 233 17 37 chr2 7084592 7088101 -246168482 - L1P LINE L1 -1082 5064 1627 267 263 25 0 chr2 7088597 7088677 -246167906 + MER103 DNA DNA 7 88 -78 288 170 0 0 chr2 7089333 7089386 -246167197 + (TG)n Simple_repeat Simple_repeat 1 53 0 296 324 29 0 chr2 7090828 7090930 -246165653 - MIR SINE MIR -62 200 96 2017 138 17 3 chr2 7092046 7092344 -246164239 + AluJb SINE Alu 1 302 -10 28 0 0 0 chr2 7092395 7092423 -246164160 + AT_rich Low_complexity Low_complexity 1 28 0 628 151 95 0 chr2 7092651 7092777 -246163806 - L1MA9 LINE L1 0 6312 6175 208 148 0 37 chr2 7092783 7092837 -246163746 + (TTCC)n Simple_repeat Simple_repeat 3 54 0 225 213 0 0 chr2 7092846 7092893 -246163690 - L1MA9 LINE L1 -147 6165 6119 369 149 0 0 chr2 7093563 7093630 -246162953 + (TG)n Simple_repeat Simple_repeat 1 67 0 4570 132 7 11 chr2 7093847 7094561 -246162022 + MER50 LTR ERV1 1 711 -23 260 318 59 34 chr2 7094695 7094934 -246161649 - L2 LINE L2 -852 2462 2218 2209 119 0 0 chr2 7095323 7095618 -246160965 - AluSx SINE Alu -17 295 1 3817 148 39 10 chr2 7096087 7096789 -246159794 - MER50 LTR ERV1 -12 722 1 218 294 56 40 chr2 7096798 7096924 -246159659 - L2 LINE L2 -512 2802 2675 841 144 20 0 chr2 7098221 7098367 -246158216 - L1MA5A LINE L1 0 6297 6149 239 293 0 37 chr2 7098710 7098792 -246157791 + MIR SINE MIR 38 116 -92 2072 118 43 38 chr2 7099292 7099665 -246156918 + THE1C LTR MaLR 1 375 0 433 315 55 22 chr2 7100267 7100632 -246155951 - L1M4 LINE L1 -2164 3982 3606 188 65 0 32 chr2 7100640 7100671 -246155912 + (TCC)n Simple_repeat Simple_repeat 3 32 0 335 280 73 7 chr2 7101002 7101152 -246155431 - L1M4 LINE L1 -2922 3224 3065 2194 131 0 0 chr2 7101780 7102086 -246154497 - AluSq SINE Alu -7 306 1 238 247 0 71 chr2 7102392 7102477 -246154106 + T-rich Low_complexity Low_complexity 2 80 0 315 113 0 0 chr2 7102893 7102946 -246153637 + (TG)n Simple_repeat Simple_repeat 2 54 0 2019 121 79 25 chr2 7104387 7104743 -246151840 + THE1C LTR MaLR 1 375 0 1844 153 0 0 chr2 7105125 7105419 -246151164 + AluSx SINE Alu 22 315 0 304 316 66 20 chr2 7106982 7107134 -246149449 + MER5B DNA MER1_type 1 159 -19 302 250 20 60 chr2 7108518 7108618 -246147965 + MIR SINE MIR 50 145 -63 252 122 0 0 chr2 7109276 7109317 -246147266 + (TG)n Simple_repeat Simple_repeat 2 42 0 2295 84 0 37 chr2 7110424 7110746 -246145837 - AluSg SINE Alu 0 310 1 830 144 106 48 chr2 7110841 7110916 -246145667 + THE1C LTR MaLR 1 70 -305 2523 112 14 16 chr2 7110916 7111281 -246145302 + THE1B LTR MaLR 1 364 0 830 144 106 48 chr2 7111281 7111413 -246145170 + THE1C LTR MaLR 70 220 -155 366 23 0 0 chr2 7111887 7111930 -246144653 + (CA)n Simple_repeat Simple_repeat 1 43 0 1226 186 13 13 chr2 7111946 7112182 -246144401 + MER46A DNA MER2_type 1 236 0 475 239 117 35 chr2 7112292 7112522 -246144061 - HAL1 LINE L1 -10 2497 2249 707 318 64 41 chr2 7112609 7113317 -246143266 - HAL1 LINE L1 -533 1974 1251 344 233 0 33 chr2 7113338 7113428 -246143155 - HAL1 LINE L1 -1355 1152 1066 1306 247 98 43 chr2 7113488 7113958 -246142625 - MLT1D LTR MaLR -9 496 1 421 309 34 7 chr2 7113982 7114131 -246142452 - HAL1 LINE L1 -1189 1318 1166 1138 239 97 50 chr2 7114254 7114793 -246141790 - HAL1 LINE L1 -1313 1194 631 330 281 87 20 chr2 7116094 7116290 -246140293 - MIR SINE MIR -13 249 41 21 0 0 0 chr2 7116545 7116566 -246140017 + AT_rich Low_complexity Low_complexity 1 21 0 35 0 0 0 chr2 7117534 7117569 -246139014 + AT_rich Low_complexity Low_complexity 1 35 0 210 106 47 35 chr2 7117576 7117661 -246138922 + (TATAA)n Simple_repeat Simple_repeat 5 90 0 23 0 0 0 chr2 7117664 7117687 -246138896 + AT_rich Low_complexity Low_complexity 1 23 0 197 346 79 0 chr2 7119275 7119376 -246137207 - MIR SINE MIR -84 124 16 643 64 0 32 chr2 7119935 7120029 -246136554 - L1PA8 LINE L1 0 6172 6082 318 128 0 0 chr2 7120029 7120076 -246136507 - L1PA8 LINE L1 -44 6128 6082 349 85 0 0 chr2 7120076 7120123 -246136460 - L1PA8A LINE L1 -42 6089 6043 * 383 56 0 153 chr2 7120098 7120170 -246136413 - L1PA8 LINE L1 -30 6142 6082 356 64 0 0 chr2 7120170 7120217 -246136366 - L1PA8 LINE L1 -44 6128 6082 354 104 0 0 chr2 7120217 7120265 -246136318 - L1PA8 LINE L1 -44 6128 6081 379 43 0 0 chr2 7120265 7120311 -246136272 - L1PA8 LINE L1 -45 6127 6082 * 383 56 0 153 chr2 7120286 7120358 -246136225 - L1PA8 LINE L1 -30 6142 6082 330 110 0 151 chr2 7120333 7120406 -246136177 - L1PA8 LINE L1 -30 6142 6081 * 379 43 0 0 chr2 7120406 7120452 -246136131 - L1PA8 LINE L1 -45 6127 6082 370 69 0 153 chr2 7120427 7120499 -246136084 - L1PA8A LINE L1 -28 6103 6043 * 755 74 0 90 chr2 7120474 7120596 -246135987 - L1PA8 LINE L1 -30 6142 6032 334 325 12 31 chr2 7120841 7121004 -246135579 + MIR SINE MIR 77 236 -26 238 311 48 10 chr2 7121323 7121426 -246135157 - MIR SINE MIR -150 112 6 856 303 129 21 chr2 7121531 7122112 -246134471 + L2 LINE L2 2112 2755 -559 190 313 78 100 chr2 7122597 7123108 -246133475 + L2 LINE L2 2809 3308 -5 264 217 158 33 chr2 7124244 7124364 -246132219 + L2 LINE L2 2235 2369 -945 359 309 144 45 chr2 7125049 7125250 -246131333 + L1MEd LINE L1 411 631 -5488 369 273 0 10 chr2 7125546 7125645 -246130938 - MER5A DNA MER1_type -83 106 9 555 247 20 13 chr2 7125679 7125829 -246130754 - MLT1E2 LTR MaLR -3 623 473 2593 138 4 5 chr2 7125923 7126372 -246130211 - L1P LINE L1 -1544 4602 4158 1824 253 109 20 chr2 7126381 7127094 -246129489 - L1ME1 LINE L1 -17 6149 5373 289 200 43 87 chr2 7127103 7127126 -246129457 - L1ME1 LINE L1 -846 5300 5278 2181 80 0 3 chr2 7127126 7127412 -246129171 + L1PA5 LINE L1 5870 6154 0 289 200 43 87 chr2 7127412 7127503 -246129080 - L1ME1 LINE L1 -868 5278 5191 * 7412 148 55 27 chr2 7127497 7127977 -246128606 + L1MCa LINE L1 69 534 -5892 1573 175 44 34 chr2 7127977 7128274 -246128309 - AluJo SINE Alu -12 300 1 7412 148 55 27 chr2 7128274 7129204 -246127379 + L1MCa LINE L1 534 1510 -4916 2494 146 41 7 chr2 7129204 7129615 -246126968 + MSTA LTR MaLR 1 425 -3 7412 148 55 27 chr2 7129615 7129755 -246126828 + L1MCa LINE L1 1510 1645 -4781 1213 268 51 28 chr2 7129760 7130253 -246126330 - L1ME1 LINE L1 -2362 3784 3281 400 167 14 0 chr2 7130260 7130332 -246126251 - 7SK RNA RNA 0 193 121 604 152 0 9 chr2 7130368 7130480 -246126103 - 7SK RNA RNA -68 125 15 6213 64 7 7 chr2 7130481 7131600 -246124983 + L1PA7 LINE L1 4918 6039 -115 1006 263 92 46 chr2 7131759 7132245 -246124338 - MLT1E LTR MaLR 0 593 103 569 194 0 0 chr2 7132231 7132324 -246124259 - MLT1E LTR MaLR -449 144 52 * 239 139 0 0 chr2 7132734 7132770 -246123813 + L1P LINE L1 5224 5259 -887 246 357 7 50 chr2 7134231 7134371 -246122212 - MIR SINE MIR -51 211 78 258 282 24 73 chr2 7134522 7134646 -246121937 - L2 LINE L2 -218 3054 2937 194 286 62 71 chr2 7135023 7135135 -246121448 - L2 LINE L2 -11 3302 3192 2446 74 0 0 chr2 7135865 7136161 -246120422 + AluSg SINE Alu 1 296 -14 2015 141 0 0 chr2 7136476 7136774 -246119809 - AluSx SINE Alu -14 298 1 2180 126 7 0 chr2 7137151 7137453 -246119130 - AluSq SINE Alu -9 304 1 1206 95 0 0 chr2 7137466 7137624 -246118959 - AluY SINE Alu -8 303 146 321 293 34 27 chr2 7138263 7138410 -246118173 - MLT1I LTR MaLR -2 407 260 911 188 73 5 chr2 7139973 7140165 -246116418 + MLT2C1 LTR ERVL 1 205 -192 798 226 68 30 chr2 7140146 7140380 -246116203 + MLT1C LTR MaLR 225 467 0 * 6047 264 77 23 chr2 7140934 7143432 -246113151 + L1MEc LINE L1 46 2644 -3571 2363 189 38 2 chr2 7144539 7144956 -246111627 - MSTB1 LTR MaLR 0 432 1 2530 149 28 28 chr2 7145519 7145947 -246110636 + MSTA LTR MaLR 1 428 0 22 0 0 0 chr2 7147450 7147472 -246109111 + AT_rich Low_complexity Low_complexity 1 22 0 1265 221 164 45 chr2 7147487 7148010 -246108573 - L1MC2 LINE L1 0 7970 6186 281 218 30 69 chr2 7148010 7148111 -246108472 - MLT1I LTR MaLR -436 131 35 724 143 45 112 chr2 7148129 7148352 -246108231 - L1MC3 LINE L1 -706 7079 6872 204 40 0 0 chr2 7148362 7148387 -246108196 + (TATATG)n Simple_repeat Simple_repeat 4 28 0 246 32 0 0 chr2 7148393 7148424 -246108159 + (CA)n Simple_repeat Simple_repeat 2 32 0 1365 217 75 63 chr2 7148424 7148924 -246107659 - L1MC3 LINE L1 -1230 6555 6050 5677 176 118 101 chr2 7148961 7149551 -246107032 - L1MCa LINE L1 -4184 2242 1663 186 43 0 0 chr2 7149551 7149574 -246107009 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5677 176 118 101 chr2 7149574 7150937 -246105646 - L1MCa LINE L1 -4763 1663 256 314 292 34 0 chr2 7151034 7151123 -246105460 - L1MC4 LINE L1 -1339 6703 6612 418 168 15 23 chr2 7151124 7151255 -246105328 + (TA)n Simple_repeat Simple_repeat 1 130 0 1649 182 3 20 chr2 7151260 7151556 -246105027 - AluJb SINE Alu -21 291 1 252 395 8 8 chr2 7152575 7152709 -246103874 - MIR3 SINE MIR -38 170 37 385 314 108 10 chr2 7153566 7153760 -246102823 - MIR SINE MIR 0 262 50 300 198 42 18 chr2 7154152 7154319 -246102264 + (TAGA)n Simple_repeat Simple_repeat 3 173 0 466 140 20 0 chr2 7154481 7154581 -246102002 + (TAGA)n Simple_repeat Simple_repeat 3 104 0 1890 153 10 0 chr2 7155321 7155629 -246100954 - AluSx SINE Alu -1 311 1 195 114 0 0 chr2 7156074 7156109 -246100474 + (CTTA)n Simple_repeat Simple_repeat 2 36 0 229 250 0 0 chr2 7156459 7156507 -246100076 - MIR SINE MIR -129 79 32 23 0 0 0 chr2 7156940 7156963 -246099620 + AT_rich Low_complexity Low_complexity 1 23 0 494 16 16 0 chr2 7159566 7159629 -246096954 + (TC)n Simple_repeat Simple_repeat 2 65 0 558 303 90 10 chr2 7159979 7160279 -246096304 + L2 LINE L2 1984 2307 -1007 198 244 22 0 chr2 7160566 7160611 -246095972 + MIR3 SINE MIR 135 180 -28 1107 233 51 10 chr2 7160740 7161036 -246095547 + MLT1C LTR MaLR 152 459 -8 290 321 18 28 chr2 7161045 7161154 -246095429 + L2 LINE L2 2344 2451 -863 506 340 36 57 chr2 7161258 7161593 -246094990 + L2 LINE L2 2986 3313 0 1371 101 48 18 chr2 7162240 7162467 -246094116 - L1MA8 LINE L1 -6 6285 6052 239 342 82 6 chr2 7162705 7162863 -246093720 - MIR SINE MIR -55 207 38 1720 185 44 15 chr2 7163386 7163670 -246092913 + MLT2B2 LTR ERVL 1 275 -279 207 0 0 0 chr2 7163670 7163693 -246092890 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1720 185 44 15 chr2 7163693 7163833 -246092750 + MLT2B2 LTR ERVL 275 410 -144 986 54 42 0 chr2 7163833 7164000 -246092583 + (TCTA)n Simple_repeat Simple_repeat 4 177 0 1720 185 44 15 chr2 7164000 7164018 -246092565 + MLT2B2 LTR ERVL 410 552 -2 1119 40 0 0 chr2 7164886 7165011 -246091572 + AluY SINE Alu 1 125 -186 9985 26 2 1 chr2 7165011 7166948 -246089635 + L1PA3 LINE L1 4230 6169 0 2143 123 0 19 chr2 7166963 7167272 -246089311 + AluSx SINE Alu 3 305 -7 319 186 0 17 chr2 7167282 7167341 -246089242 - LTR67 LTR ERVL -86 471 414 435 153 153 0 chr2 7167391 7167476 -246089107 - MER53 DNA DNA -91 98 1 252 246 15 0 chr2 7167689 7167754 -246088829 + L1ME LINE L1 5367 5432 -732 386 221 271 0 chr2 7167781 7167903 -246088680 + MIR SINE MIR 12 166 -96 2196 102 3 0 chr2 7167953 7168257 -246088326 - AluSp SINE Alu -3 310 6 377 260 21 10 chr2 7168332 7168428 -246088155 + L2 LINE L2 39 135 -3179 2730 167 28 28 chr2 7168455 7168999 -246087584 + L1MC3 LINE L1 7241 7784 -1 23 0 0 0 chr2 7168999 7169022 -246087561 + AT_rich Low_complexity Low_complexity 1 23 0 1595 62 0 0 chr2 7169022 7169214 -246087369 + AluY SINE Alu 118 309 -2 315 0 0 0 chr2 7169220 7169255 -246087328 + (TAA)n Simple_repeat Simple_repeat 2 36 0 349 267 139 0 chr2 7170146 7170247 -246086336 + MER5B DNA MER1_type 4 118 -60 948 182 61 22 chr2 7170708 7170939 -246085644 - LTR32 LTR ERVL 0 471 232 279 203 78 0 chr2 7170921 7170985 -246085598 - LTR32 LTR ERVL -400 71 3 * 334 257 83 0 chr2 7170991 7171100 -246085483 - L2 LINE L2 -79 3234 3117 794 192 46 0 chr2 7171548 7171699 -246084884 + MER97c DNA MER1_type? 19 176 -914 1345 101 0 0 chr2 7172453 7172621 -246083962 + AluSc SINE Alu 134 301 -8 912 336 126 19 chr2 7172759 7173444 -246083139 - ERVL LTR ERVL -284 5480 4723 206 328 48 40 chr2 7174013 7174138 -246082445 - MIR SINE MIR -59 203 78 279 243 57 0 chr2 7174262 7174332 -246082251 + MER91B DNA MER1_type 6 79 -111 301 179 18 0 chr2 7175408 7175464 -246081119 + MER91B DNA MER1_type 6 62 -128 204 313 51 21 chr2 7176158 7176294 -246080289 + MIR SINE MIR 3 135 -73 21 0 0 0 chr2 7176313 7176334 -246080249 + AT_rich Low_complexity Low_complexity 1 21 0 2258 104 44 41 chr2 7176777 7177143 -246079440 + THE1C LTR MaLR 5 371 -4 581 277 116 31 chr2 7177363 7177655 -246078928 + LTR33 LTR ERVL 205 521 0 1066 81 0 0 chr2 7177748 7177884 -246078699 + AluY SINE Alu 173 308 -3 351 239 0 0 chr2 7178101 7178231 -246078352 + (TG)n Simple_repeat Simple_repeat 2 131 0 579 239 3 0 chr2 7178253 7178610 -246077973 + (TG)n Simple_repeat Simple_repeat 1 358 0 252 305 162 0 chr2 7179260 7179414 -246077169 - MIR3 SINE MIR -9 199 21 1188 196 46 39 chr2 7181471 7181751 -246074832 + AluJo SINE Alu 1 282 -30 3242 190 137 112 chr2 7181821 7182340 -246074243 + L1MC3 LINE L1 6566 7070 -715 263 294 20 10 chr2 7182340 7182442 -246074141 + MLT1F1 LTR MaLR 29 131 -436 3242 190 137 112 chr2 7182442 7183000 -246073583 + L1MC3 LINE L1 7070 7774 -11 267 365 19 0 chr2 7183005 7183112 -246073471 - L2 LINE L2 -15 3298 3190 417 330 57 24 chr2 7183616 7183828 -246072755 + MIR SINE MIR 14 232 -30 477 0 0 0 chr2 7184039 7184092 -246072491 + (GGAA)n Simple_repeat Simple_repeat 4 56 0 185 0 40 0 chr2 7184091 7184116 -246072467 + (TAA)n Simple_repeat Simple_repeat 2 27 0 * 1301 268 49 12 chr2 7184438 7184848 -246071735 + LTR16C LTR ERVL 67 491 0 3366 187 101 41 chr2 7185067 7185916 -246070667 - L1MA4 LINE L1 -1 6299 5400 1084 103 5 19 chr2 7187194 7187684 -246068899 + (TCCA)n Simple_repeat Simple_repeat 1 666 0 289 316 129 84 chr2 7188637 7188862 -246067721 - L2 LINE L2 -8 3264 3030 261 353 181 23 chr2 7189010 7189143 -246067440 - L2 LINE L2 -8 3264 3111 388 398 25 0 chr2 7189615 7189776 -246066807 - L2 LINE L2 -1 3271 3107 637 91 20 0 chr2 7191332 7191431 -246065152 - L1MA10 LINE L1 0 6334 6234 1695 161 0 28 chr2 7193639 7193953 -246062630 - AluJb SINE Alu 0 307 2 186 292 31 0 chr2 7194414 7194479 -246062104 - MIR SINE MIR -70 192 126 1721 184 5 89 chr2 7196894 7197083 -246059500 + MER57A LTR ERV1 1 134 -269 2071 143 23 52 chr2 7197083 7197468 -246059115 + THE1C LTR MaLR 1 374 -1 1721 184 5 89 chr2 7197468 7197718 -246058865 + MER57A LTR ERV1 134 403 0 242 240 125 87 chr2 7198564 7198886 -246057697 + L1ME4a LINE L1 5584 5927 -194 207 0 0 0 chr2 7198886 7198909 -246057674 + (TG)n Simple_repeat Simple_repeat 2 24 0 242 240 125 87 chr2 7198909 7199002 -246057581 + L1ME4a LINE L1 5927 6015 -106 22 35 0 0 chr2 7199059 7199088 -246057495 + AT_rich Low_complexity Low_complexity 1 29 0 393 276 91 73 chr2 7199170 7199458 -246057125 - L1MEd LINE L1 -4867 1252 971 1596 180 16 32 chr2 7199458 7199774 -246056809 - AluJo SINE Alu -1 311 1 393 276 91 73 chr2 7199774 7200047 -246056536 - L1MEd LINE L1 -5148 971 681 1807 236 31 8 chr2 7200695 7201080 -246055503 + MSTD LTR MaLR 1 394 -2 453 293 47 22 chr2 7201122 7201354 -246055229 + L1MC/D LINE L1 5584 5821 -1987 767 301 0 0 chr2 7201355 7201558 -246055025 + MER63A DNA MER1_type 1 203 -7 1625 147 0 96 chr2 7201688 7202002 -246054581 + AluJo SINE Alu 3 286 -26 24 32 0 0 chr2 7202270 7202301 -246054282 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr2 7202576 7202604 -246053979 + AT_rich Low_complexity Low_complexity 1 28 0 1613 202 71 49 chr2 7202610 7202976 -246053607 + MLT1A2 LTR MaLR 1 374 0 628 49 24 0 chr2 7205030 7205112 -246051471 - L1PA10 LINE L1 -8 6160 6077 242 35 0 0 chr2 7205113 7205142 -246051441 + L1PA10 LINE L1 6020 6048 -120 5657 273 47 66 chr2 7205450 7206533 -246050050 - L2 LINE L2 -405 2909 1806 315 0 0 0 chr2 7206533 7206568 -246050015 + (TTA)n Simple_repeat Simple_repeat 2 36 0 1509 173 24 12 chr2 7206571 7206820 -246049763 - AluJb SINE Alu -30 282 31 564 195 0 0 chr2 7206820 7206902 -246049681 - AluJ/FLAM SINE Alu -228 84 3 5657 273 47 66 chr2 7206902 7206977 -246049606 - L2 LINE L2 -1509 1805 1730 1952 126 31 0 chr2 7206977 7207263 -246049320 + AluSx SINE Alu 17 311 -1 5657 273 47 66 chr2 7207263 7208361 -246048222 - L2 LINE L2 -1584 1730 612 223 385 62 26 chr2 7208524 7208716 -246047867 + L2 LINE L2 2652 2850 -464 326 303 92 17 chr2 7209473 7209592 -246046991 - MIR SINE MIR -60 148 21 180 0 0 0 chr2 7210577 7210597 -246045986 + (A)n Simple_repeat Simple_repeat 1 20 0 902 107 61 0 chr2 7211208 7211339 -246045244 + MER85 DNA T2_type 1 139 0 272 311 145 25 chr2 7212512 7212893 -246043690 + MLT1J LTR MaLR 35 509 -2 2133 171 97 13 chr2 7213285 7213678 -246042905 + MSTB LTR MaLR 1 426 0 1818 144 3 56 chr2 7213844 7214164 -246042419 + AluJb SINE Alu 1 303 -9 249 108 0 0 chr2 7214164 7214201 -246042382 + (TG)n Simple_repeat Simple_repeat 1 37 0 194 385 15 22 chr2 7214337 7214472 -246042111 - L2 LINE L2 -534 2780 2647 181 216 54 0 chr2 7215600 7215637 -246040946 + L2 LINE L2 3182 3220 -93 1820 214 23 3 chr2 7216674 7217025 -246039558 - MLT1A1 LTR MaLR -1 364 7 1634 174 59 3 chr2 7217778 7218066 -246038517 - AluJb SINE Alu -8 304 1 222 190 17 17 chr2 7218107 7218165 -246038418 + A-rich Low_complexity Low_complexity 5 62 0 533 277 34 0 chr2 7218176 7218324 -246038259 - MIR SINE MIR -108 154 2 240 143 0 0 chr2 7219059 7219101 -246037482 + (TA)n Simple_repeat Simple_repeat 1 42 0 56 16 0 0 chr2 7219148 7219211 -246037372 + AT_rich Low_complexity Low_complexity 1 63 0 1436 182 0 0 chr2 7219312 7219559 -246037024 - MER57A LTR ERV1 0 403 157 1872 149 10 7 chr2 7221955 7222243 -246034340 - AluSx SINE Alu -23 289 1 187 241 74 19 chr2 7222367 7222421 -246034162 + L2 LINE L2 3195 3251 -21 191 330 80 18 chr2 7222444 7222556 -246034027 - L2 LINE L2 -6 3307 3189 2153 135 0 0 chr2 7222841 7223138 -246033445 - AluSx SINE Alu -15 297 1 360 316 0 0 chr2 7223173 7223268 -246033315 + L2 LINE L2 3174 3268 -4 1975 193 51 22 chr2 7223332 7223746 -246032837 + MSTB LTR MaLR 1 426 0 308 159 0 16 chr2 7224536 7224599 -246031984 + (TG)n Simple_repeat Simple_repeat 2 63 0 268 278 144 0 chr2 7226541 7226638 -246029945 - MIR SINE MIR -75 187 77 1651 154 7 54 chr2 7226812 7227110 -246029473 + AluJo SINE Alu 5 288 -24 237 65 0 0 chr2 7227271 7227302 -246029281 + (TG)n Simple_repeat Simple_repeat 2 32 0 189 0 0 0 chr2 7227323 7227344 -246029239 + (CA)n Simple_repeat Simple_repeat 2 22 0 * 576 29 0 0 chr2 7227343 7227413 -246029170 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 192 40 0 0 chr2 7227436 7227461 -246029122 + (GA)n Simple_repeat Simple_repeat 2 26 0 22 35 0 0 chr2 7227505 7227534 -246029049 + AT_rich Low_complexity Low_complexity 1 29 0 234 282 26 13 chr2 7228207 7228285 -246028298 + MIR3 SINE MIR 100 178 -30 22 0 0 0 chr2 7228571 7228593 -246027990 + AT_rich Low_complexity Low_complexity 1 22 0 2281 96 0 7 chr2 7229535 7229836 -246026747 + AluY SINE Alu 1 299 -12 21 0 0 0 chr2 7231984 7232005 -246024578 + AT_rich Low_complexity Low_complexity 1 21 0 2270 118 0 0 chr2 7232162 7232466 -246024117 + AluSx SINE Alu 2 305 -7 207 125 0 0 chr2 7233228 7233268 -246023315 + (T)n Simple_repeat Simple_repeat 1 40 0 22 43 0 21 chr2 7233277 7233307 -246023276 + AT_rich Low_complexity Low_complexity 1 31 -15 2945 102 67 9 chr2 7233307 7233756 -246022827 - L1PB1 LINE L1 -3 6148 5674 22 43 0 21 chr2 7233756 7233772 -246022811 + AT_rich Low_complexity Low_complexity 31 46 0 2754 30 0 0 chr2 7233772 7234075 -246022508 - L1PA5 LINE L1 -11 6143 5841 235 293 57 19 chr2 7234619 7234725 -246021858 - L1MDa LINE L1 -4643 1897 1788 30 0 0 0 chr2 7234930 7234960 -246021623 + AT_rich Low_complexity Low_complexity 1 30 0 2901 194 55 5 chr2 7235768 7236346 -246020237 + MER82 DNA MER2_type 47 653 0 245 336 50 29 chr2 7236370 7236510 -246020073 + MIR3 SINE MIR 16 158 -50 7274 160 11 27 chr2 7236614 7237296 -246019287 - HSMAR2 DNA Mariner -2 1300 648 2113 128 3 0 chr2 7237296 7237594 -246018989 + AluSc SINE Alu 10 308 -1 7274 160 11 27 chr2 7237594 7238223 -246018360 - HSMAR2 DNA Mariner -654 648 10 312 227 40 13 chr2 7238713 7238788 -246017795 + MER5A DNA MER1_type 30 106 -83 402 312 26 21 chr2 7239405 7239594 -246016989 - MIR SINE MIR 0 262 73 442 286 23 15 chr2 7240648 7240781 -246015802 + MIR3 SINE MIR 75 208 0 317 304 62 0 chr2 7242146 7242258 -246014325 + MER34 LTR ERV1 1 119 -423 * 1477 265 78 13 chr2 7242247 7242711 -246013872 + LTR48B LTR ERV1 151 644 0 2289 175 144 45 chr2 7243114 7243692 -246012891 + LTR24C LTR ERV1 1 635 0 204 213 43 0 chr2 7244525 7244572 -246012011 + (CATATA)n Simple_repeat Simple_repeat 4 52 0 241 251 5 0 chr2 7245148 7245228 -246011355 + MIR SINE MIR 97 178 -30 1678 190 14 3 chr2 7245576 7245866 -246010717 - AluJo SINE Alu -18 294 2 218 312 80 14 chr2 7246274 7246412 -246010171 + MIR SINE MIR 70 216 -46 215 288 68 0 chr2 7246516 7246589 -246009994 - MIR SINE MIR -95 167 90 13096 134 28 122 chr2 7246887 7249649 -246006934 + L1PA15-16 LINE L1 2 2502 -4347 1061 150 6 12 chr2 7249695 7249868 -246006715 + L1PA16 LINE L1 5993 6164 -2 1695 229 128 18 chr2 7250254 7250482 -246006101 - MLT1D LTR MaLR -1 504 303 2279 104 13 0 chr2 7250482 7250781 -246005802 - AluSx SINE Alu -9 303 1 1695 229 128 18 chr2 7250781 7251006 -246005577 - MLT1D LTR MaLR -202 303 1 205 153 17 34 chr2 7251711 7251770 -246004813 + CT-rich Low_complexity Low_complexity 2 59 0 202 352 44 0 chr2 7251837 7251928 -246004655 - L2 LINE L2 -1001 2313 2219 237 139 0 0 chr2 7251977 7252020 -246004563 + (CA)n Simple_repeat Simple_repeat 2 44 0 22 0 0 0 chr2 7252907 7252929 -246003654 + AT_rich Low_complexity Low_complexity 1 22 0 210 362 38 0 chr2 7254191 7254296 -246002287 + MIR SINE MIR 33 141 -67 827 269 0 0 chr2 7254778 7254971 -246001612 - MER58A DNA MER1_type -5 219 27 196 241 68 33 chr2 7256869 7256960 -245999623 + MIR SINE MIR 28 126 -82 1623 99 86 65 chr2 7256960 7257252 -245999331 - AluSq SINE Alu -6 307 10 196 241 68 33 chr2 7257252 7257270 -245999313 + MIR SINE MIR 126 142 -66 266 361 38 19 chr2 7257668 7257826 -245998757 + MIR SINE MIR 54 214 -48 267 250 0 0 chr2 7258344 7258444 -245998139 + (TG)n Simple_repeat Simple_repeat 1 100 0 439 238 129 41 chr2 7259206 7259423 -245997160 - MIR SINE MIR -11 251 22 214 266 78 104 chr2 7260054 7260208 -245996375 - MER5B DNA MER1_type -35 154 5 1838 178 0 3 chr2 7260314 7260607 -245995976 + AluJb SINE Alu 3 294 -18 369 215 65 9 chr2 7260784 7260903 -245995680 - MLT1I LTR MaLR 0 450 281 236 328 25 17 chr2 7260990 7261109 -245995474 - MLT1I LTR MaLR -289 260 141 627 157 6 93 chr2 7261578 7261705 -245994878 + L1MC2 LINE L1 6188 6298 -46 2325 115 0 0 chr2 7261705 7262009 -245994574 - AluSx SINE Alu -8 304 1 627 157 6 93 chr2 7262009 7262053 -245994530 + L1MC2 LINE L1 6298 6344 0 * 1893 248 148 58 chr2 7262049 7262955 -245993628 + L1MC4 LINE L1 6914 7918 -124 333 0 0 0 chr2 7262955 7262992 -245993591 + (CA)n Simple_repeat Simple_repeat 2 38 0 1893 248 148 58 chr2 7262992 7263075 -245993508 + L1MC4 LINE L1 7918 7992 -50 2108 130 0 0 chr2 7264110 7264410 -245992173 - AluSc SINE Alu -9 300 1 1882 233 137 37 chr2 7265793 7266445 -245990138 - L1ME1 LINE L1 -18 6148 5432 1736 188 3 10 chr2 7266640 7266944 -245989639 + AluJo SINE Alu 1 302 -10 2144 190 128 0 chr2 7267171 7267593 -245988990 + MLT2B2 LTR ERVL 1 476 -39 576 36 58 29 chr2 7267593 7267730 -245988853 + (TCTA)n Simple_repeat Simple_repeat 2 142 0 356 100 50 20 chr2 7267742 7267842 -245988741 + (TCTA)n Simple_repeat Simple_repeat 3 105 0 22 0 0 0 chr2 7267928 7267950 -245988633 + AT_rich Low_complexity Low_complexity 1 22 0 2286 123 0 0 chr2 7268382 7268690 -245987893 - AluSg SINE Alu -2 308 1 24 32 0 0 chr2 7269251 7269282 -245987301 + AT_rich Low_complexity Low_complexity 1 31 0 287 113 19 0 chr2 7269605 7269658 -245986925 + CT-rich Low_complexity Low_complexity 1 54 0 390 57 0 0 chr2 7269924 7269977 -245986606 + (TG)n Simple_repeat Simple_repeat 2 54 0 613 287 22 67 chr2 7270866 7271134 -245985449 + MLT1I LTR MaLR 95 350 -59 851 239 29 19 chr2 7271423 7271632 -245984951 + MER58A DNA MER1_type 7 217 -7 248 344 11 11 chr2 7272985 7273075 -245983508 - L2 LINE L2 -78 3194 3105 2212 111 0 3 chr2 7274164 7274461 -245982122 + AluSg SINE Alu 11 306 -4 271 196 71 131 chr2 7274509 7274623 -245981960 - MIR3 SINE MIR -21 187 85 667 247 17 11 chr2 7274623 7274797 -245981786 - MER5B DNA MER1_type -3 175 1 271 196 71 131 chr2 7274797 7274850 -245981733 - MIR3 SINE MIR -123 85 30 1314 170 50 57 chr2 7275720 7275866 -245980717 + AluJo SINE Alu 1 146 -166 2473 57 3 3 chr2 7275866 7276164 -245980419 + AluY SINE Alu 1 298 -13 1314 170 50 57 chr2 7276164 7276300 -245980283 + AluJo SINE Alu 146 281 -31 1729 138 0 8 chr2 7276699 7276986 -245979597 + AluSg SINE Alu 29 313 0 1614 169 59 72 chr2 7277192 7277582 -245979001 - MLT1B LTR MaLR 0 390 6 2138 118 3 0 chr2 7278006 7278295 -245978288 + AluSx SINE Alu 5 294 -18 2117 111 0 3 chr2 7279129 7279427 -245977156 + AluSg SINE Alu 1 297 -13 397 193 67 8 chr2 7279465 7279584 -245976999 + L1MCa LINE L1 1293 1418 -5008 204 143 0 24 chr2 7279584 7279626 -245976957 + (CAAA)n Simple_repeat Simple_repeat 1 41 0 26 64 0 0 chr2 7279776 7279823 -245976760 + AT_rich Low_complexity Low_complexity 1 47 0 24 53 0 0 chr2 7279848 7279886 -245976697 + AT_rich Low_complexity Low_complexity 1 38 0 581 194 8 23 chr2 7280114 7280243 -245976340 + MIR SINE MIR 105 231 -31 27 29 0 0 chr2 7282015 7282049 -245974534 + AT_rich Low_complexity Low_complexity 1 34 0 437 337 76 52 chr2 7283468 7283756 -245972827 - L2 LINE L2 0 3272 2978 323 273 27 9 chr2 7283829 7283939 -245972644 - MIR SINE MIR 0 262 151 349 359 132 23 chr2 7283940 7284160 -245972423 + L3 LINE CR1 1328 1571 -6 2121 153 42 30 chr2 7284631 7285179 -245971404 - MLT2A2 LTR ERVL 0 554 1 14805 90 13 3 chr2 7285179 7287266 -245969317 - HERVL-A2 LTR ERVL 0 5654 3548 333 199 35 106 chr2 7288021 7288162 -245968421 + MER104 DNA Tc2 1 131 -49 192 356 75 26 chr2 7289013 7289280 -245967303 + L2 LINE L2 921 1200 -2114 307 368 73 51 chr2 7289836 7290206 -245966377 + L2 LINE L2 2895 3272 0 1649 247 63 33 chr2 7291118 7292272 -245964311 + L1ME1 LINE L1 4522 5716 -448 318 217 132 42 chr2 7292287 7292485 -245964098 + L1ME1 LINE L1 5965 6334 0 231 340 64 14 chr2 7292604 7292745 -245963838 + L2 LINE L2 3162 3309 -4 3791 189 22 28 chr2 7294040 7295375 -245961208 - L1MB3 LINE L1 -41 6142 4819 2021 212 40 16 chr2 7295578 7296022 -245960561 + MLT2B2 LTR ERVL 1 455 -60 951 57 19 19 chr2 7296022 7296181 -245960402 + (TCTA)n Simple_repeat Simple_repeat 2 160 0 341 335 40 50 chr2 7297095 7297295 -245959288 + MIR SINE MIR 47 244 -18 192 158 0 0 chr2 7297862 7297900 -245958683 + T-rich Low_complexity Low_complexity 1 38 0 2034 194 27 57 chr2 7301284 7301869 -245954714 - L1MC1 LINE L1 -75 6258 5739 1197 53 0 0 chr2 7301869 7302019 -245954564 - L1PA3 LINE L1 -3 6152 6003 2034 194 27 57 chr2 7302019 7302327 -245954256 - L1MC1 LINE L1 -594 5739 5423 207 283 0 0 chr2 7302775 7302821 -245953762 + (TTG)n Simple_repeat Simple_repeat 2 47 0 257 328 59 8 chr2 7302858 7302977 -245953606 + MIR SINE MIR 101 225 -37 366 330 25 0 chr2 7303330 7303533 -245953050 - MLT1L LTR MaLR 0 615 408 22 0 0 0 chr2 7303717 7303739 -245952844 + AT_rich Low_complexity Low_complexity 1 22 0 34 79 0 0 chr2 7303856 7303932 -245952651 + AT_rich Low_complexity Low_complexity 1 76 0 3277 197 48 17 chr2 7304302 7305070 -245951513 + L1MC1 LINE L1 5542 6333 0 2135 111 7 10 chr2 7305403 7305700 -245950883 - AluSq SINE Alu -17 296 1 413 281 65 41 chr2 7305934 7306180 -245950403 - L1MEd LINE L1 -3679 2450 2199 211 122 41 0 chr2 7306305 7306354 -245950229 + (TA)n Simple_repeat Simple_repeat 1 51 0 630 338 62 48 chr2 7306692 7307174 -245949409 - HAL1 LINE L1 -761 1746 1258 388 309 67 49 chr2 7307213 7307498 -245949085 - L1MEd LINE L1 -5046 1073 784 180 0 0 0 chr2 7308184 7308204 -245948379 + (CAAAAA)n Simple_repeat Simple_repeat 1 20 0 378 252 24 8 chr2 7308410 7308533 -245948050 + Charlie8 DNA MER1_type 79 203 -2214 5149 20 0 0 chr2 7308990 7309575 -245947008 - L1PA3 LINE L1 -5 6150 5566 250 317 111 20 chr2 7311219 7311441 -245945142 + MIR3 SINE MIR 4 251 -11 609 234 19 6 chr2 7311871 7312029 -245944554 - MER58B DNA MER1_type 0 341 182 756 226 34 15 chr2 7312031 7312235 -245944348 + MER20 DNA MER1_type 3 210 -9 529 167 123 14 chr2 7312236 7312374 -245944209 - MER58B DNA MER1_type -152 189 37 37 39 0 0 chr2 7315811 7315862 -245940721 + AT_rich Low_complexity Low_complexity 1 51 0 262 280 167 15 chr2 7316112 7316244 -245940339 + MIR SINE MIR 1 152 -110 2180 146 34 3 chr2 7316697 7317081 -245939502 + MSTA LTR MaLR 33 428 0 245 208 0 38 chr2 7318364 7318417 -245938166 - MER58A DNA MER1_type 0 224 174 1412 158 50 68 chr2 7318425 7318528 -245938055 + AluJb SINE Alu 11 114 -199 2747 71 3 3 chr2 7318528 7318881 -245937702 + THE1A LTR MaLR 3 355 0 1412 158 50 68 chr2 7318881 7319085 -245937498 + AluJb SINE Alu 114 313 0 578 236 54 7 chr2 7319093 7319241 -245937342 - MER58A DNA MER1_type -33 191 37 1907 172 9 78 chr2 7319590 7319837 -245936746 + MSTD LTR MaLR 1 208 -188 420 55 0 0 chr2 7319837 7319892 -245936691 + (CA)n Simple_repeat Simple_repeat 1 55 0 1907 172 9 78 chr2 7319892 7320069 -245936514 + MSTD LTR MaLR 208 396 0 2391 120 13 13 chr2 7320391 7320765 -245935818 - THE1C LTR MaLR -1 374 1 1409 219 22 35 chr2 7320765 7321128 -245935455 - MLT1A1 LTR MaLR -4 361 1 269 323 121 0 chr2 7321982 7322081 -245934502 + L3 LINE CR1 1373 1483 -94 631 245 41 41 chr2 7323064 7323260 -245933323 + MIR SINE MIR 46 241 -21 207 250 0 0 chr2 7323277 7323321 -245933262 - L2 LINE L2 -5 3308 3265 521 165 0 10 chr2 7323609 7323712 -245932871 + GA-rich Low_complexity Low_complexity 3 104 0 302 192 13 51 chr2 7325042 7325120 -245931463 + L1MC4 LINE L1 6615 6689 -1353 444 244 88 40 chr2 7325190 7325440 -245931143 - HAL1b LINE L1 -258 1090 829 251 347 0 24 chr2 7325442 7325566 -245931017 - L2 LINE L2 -942 2372 2252 30 69 0 0 chr2 7326024 7326082 -245930501 + AT_rich Low_complexity Low_complexity 1 58 0 5869 19 17 1 chr2 7326207 7326855 -245929728 - SVA Other Other -3 1383 726 2240 120 11 14 chr2 7326879 7327246 -245929337 - L1MA2 LINE L1 0 6304 5939 1126 252 132 12 chr2 7327744 7328161 -245928422 - MLT1C LTR MaLR 0 467 1 2132 116 34 45 chr2 7328780 7328940 -245927643 + THE1C LTR MaLR 1 161 -214 1977 153 7 0 chr2 7328940 7329228 -245927355 - AluSq SINE Alu -23 290 1 2132 116 34 45 chr2 7329228 7329446 -245927137 + THE1C LTR MaLR 161 375 0 26 30 0 0 chr2 7329554 7329587 -245926996 + AT_rich Low_complexity Low_complexity 1 33 0 2195 110 7 0 chr2 7331303 7331427 -245925156 + AluSg SINE Alu 1 123 -187 462 18 0 0 chr2 7331427 7331482 -245925101 + (CA)n Simple_repeat Simple_repeat 2 56 0 2195 110 7 0 chr2 7331482 7331665 -245924918 + AluSg SINE Alu 123 310 0 191 297 55 22 chr2 7331985 7332076 -245924507 + MIR SINE MIR 116 209 -53 2133 111 7 3 chr2 7332119 7332407 -245924176 - AluSx SINE Alu -23 289 1 776 221 94 35 chr2 7333518 7333800 -245922783 - MER33 DNA MER1_type -30 294 1 397 360 111 5 chr2 7333927 7334232 -245922351 - L2 LINE L2 -270 3002 2667 189 154 0 0 chr2 7334376 7334415 -245922168 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 393 288 156 15 chr2 7334471 7334676 -245921907 - MIR SINE MIR -27 235 2 199 274 71 0 chr2 7334885 7334969 -245921614 - MIR SINE MIR -112 150 61 22 0 0 0 chr2 7335178 7335200 -245921383 + AT_rich Low_complexity Low_complexity 1 22 0 334 255 29 51 chr2 7335391 7335569 -245921014 + MIR SINE MIR 19 192 -59 207 293 109 23 chr2 7335738 7335912 -245920671 - MIR SINE MIR -55 207 19 488 254 48 12 chr2 7336573 7336738 -245919845 + MIR SINE MIR 28 198 -64 998 205 89 13 chr2 7340399 7340712 -245915871 - MER33 DNA MER1_type -7 317 1 409 201 82 50 chr2 7341700 7341828 -245914755 - MER53 DNA DNA -25 164 29 1834 100 37 0 chr2 7341828 7342069 -245914514 - AluSx SINE Alu -20 292 43 409 201 82 50 chr2 7342069 7342099 -245914484 - MER53 DNA DNA -160 29 1 192 357 43 32 chr2 7342409 7342705 -245913878 - L2 LINE L2 -230 3083 2778 1950 169 28 11 chr2 7343164 7343403 -245913180 - MLT1B LTR MaLR 0 390 141 2103 113 0 61 chr2 7343403 7343729 -245912854 + AluSp SINE Alu 1 306 -7 1950 169 28 11 chr2 7343729 7343851 -245912732 - MLT1B LTR MaLR -249 141 23 1522 214 218 4 chr2 7346789 7347279 -245909304 - L1MB8 LINE L1 -1 6177 5583 234 0 0 0 chr2 7347626 7347652 -245908931 + (T)n Simple_repeat Simple_repeat 1 26 0 285 215 83 50 chr2 7348438 7348559 -245908024 - MER96B DNA MER1_type? -261 156 32 205 225 0 0 chr2 7348589 7348629 -245907954 + L2 LINE L2 3266 3305 -8 262 293 41 23 chr2 7348971 7349109 -245907474 + MIR SINE MIR 5 143 -68 197 385 0 10 chr2 7350624 7350728 -245905855 - MIR SINE MIR -114 148 46 240 35 0 0 chr2 7352298 7352327 -245904256 + (CA)n Simple_repeat Simple_repeat 2 30 0 1685 146 55 78 chr2 7352679 7353063 -245903520 + THE1C LTR MaLR 1 375 0 360 301 30 15 chr2 7353091 7353224 -245903359 - MIR SINE MIR -71 191 57 372 66 279 0 chr2 7353809 7353870 -245902713 + MADE1 DNA Mariner 3 80 0 2220 98 24 0 chr2 7354026 7354323 -245902260 + AluSg SINE Alu 1 304 -6 950 199 0 31 chr2 7354361 7354557 -245902026 + AluJo SINE Alu 120 309 -3 181 388 15 0 chr2 7355236 7355303 -245901280 + MIR SINE MIR 21 88 -120 995 305 96 43 chr2 7355655 7355690 -245900893 + L1ME3A LINE L1 2884 2916 -3230 2288 113 3 3 chr2 7355690 7356000 -245900583 + AluY SINE Alu 1 310 -1 995 305 96 43 chr2 7356000 7357344 -245899239 + L1ME3A LINE L1 2916 4335 -1811 22 35 0 0 chr2 7357426 7357455 -245899128 + AT_rich Low_complexity Low_complexity 1 29 0 324 276 111 72 chr2 7357801 7358080 -245898503 + L1ME3A LINE L1 5681 5970 -200 756 20 29 0 chr2 7358272 7358374 -245898209 + (TCTA)n Simple_repeat Simple_repeat 3 107 0 199 349 56 8 chr2 7361153 7361279 -245895304 + L2 LINE L2 3102 3233 -39 398 269 48 21 chr2 7361988 7362133 -245894450 + MIR SINE MIR 102 250 -12 663 149 15 15 chr2 7362336 7362470 -245894113 + L1MB8 LINE L1 6044 6177 -1 216 309 0 12 chr2 7363671 7363752 -245892831 + MIR SINE MIR 177 256 -6 24 0 0 0 chr2 7367855 7367879 -245888704 + AT_rich Low_complexity Low_complexity 1 24 0 1519 234 45 52 chr2 7368017 7368482 -245888101 + MLT1C LTR MaLR 6 467 0 600 40 0 0 chr2 7368866 7368941 -245887642 + (TGG)n Simple_repeat Simple_repeat 2 76 0 959 265 71 58 chr2 7369678 7370006 -245886577 + MER77 LTR ERV1 281 673 -6 1161 204 27 108 chr2 7370434 7370841 -245885742 - MLT1A2 LTR MaLR 0 374 1 624 281 33 54 chr2 7372160 7372402 -245884181 + MIR SINE MIR 16 252 -10 3604 174 73 4 chr2 7372943 7373627 -245882956 + L1MB2 LINE L1 5439 6169 -2 555 191 19 0 chr2 7374723 7374885 -245881698 + GA-rich Low_complexity Low_complexity 2 166 0 352 275 74 11 chr2 7375314 7375384 -245881199 - MIR SINE MIR -16 246 182 2066 176 100 55 chr2 7375384 7375914 -245880669 + MLT2B3 LTR ERVL 1 554 0 352 275 74 11 chr2 7375914 7376032 -245880551 - MIR SINE MIR -80 182 46 2169 132 90 25 chr2 7376202 7376604 -245879979 + MSTA LTR MaLR 1 428 0 184 225 0 127 chr2 7377194 7377218 -245879365 - MER5A DNA MER1_type 0 189 164 2712 86 11 0 chr2 7377218 7377569 -245879014 - THE1A LTR MaLR 0 355 1 11565 96 5 10 chr2 7377569 7379157 -245877426 - THE1A-int LTR MaLR 0 1580 1 2684 91 11 0 chr2 7379157 7379508 -245877075 - THE1A LTR MaLR 0 355 1 184 225 0 127 chr2 7379508 7379552 -245877031 - MER5A DNA MER1_type -22 167 128 183 320 62 23 chr2 7379581 7379709 -245876874 + MER5A DNA MER1_type 55 187 -2 * 684 178 8 0 chr2 7379596 7379725 -245876858 - MER5A DNA MER1_type -59 130 1 395 242 6 19 chr2 7380049 7380206 -245876377 + (TA)n Simple_repeat Simple_repeat 1 155 0 180 353 118 0 chr2 7380704 7380823 -245875760 - L2 LINE L2 0 3313 3181 405 267 17 9 chr2 7381151 7381267 -245875316 - MER5A DNA MER1_type -69 120 4 362 255 101 13 chr2 7381867 7382016 -245874567 - LTR33 LTR ERVL -5 516 355 270 254 0 14 chr2 7383092 7383163 -245873420 + MIR SINE MIR 22 91 -117 1592 243 200 20 chr2 7383462 7384006 -245872577 - MLT1E1 LTR MaLR 0 654 13 5329 118 22 4 chr2 7384888 7385553 -245871030 - L1PA13 LINE L1 0 6163 5479 195 42 0 0 chr2 7385553 7385577 -245871006 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5329 118 22 4 chr2 7385577 7385715 -245870868 - L1PA13 LINE L1 -684 5479 5345 22 56 0 0 chr2 7386456 7386492 -245870091 + AT_rich Low_complexity Low_complexity 1 36 0 401 375 48 39 chr2 7386535 7386643 -245869940 - L2 LINE L2 -664 2650 2545 2223 107 7 3 chr2 7386643 7386952 -245869631 - AluSq SINE Alu -3 310 1 401 375 48 39 chr2 7386952 7387256 -245869327 - L2 LINE L2 -769 2545 2234 206 271 43 107 chr2 7387657 7387797 -245868786 + L2 LINE L2 2710 2840 -474 212 278 72 31 chr2 7388033 7388130 -245868453 - L2 LINE L2 -641 2673 2573 445 264 0 16 chr2 7388131 7388256 -245868327 - LTR67 LTR ERVL -2 555 433 189 322 252 9 chr2 7389103 7389218 -245867365 + MIR3 SINE MIR 46 188 -20 22 35 0 0 chr2 7389447 7389476 -245867107 + AT_rich Low_complexity Low_complexity 1 29 0 213 65 0 0 chr2 7390796 7390827 -245865756 + (CA)n Simple_repeat Simple_repeat 2 32 0 449 204 25 0 chr2 7391475 7391637 -245864946 + GA-rich Low_complexity Low_complexity 2 167 0 487 348 14 9 chr2 7393976 7394186 -245862397 + MIR SINE MIR 31 241 -21 1189 132 0 0 chr2 7394460 7394627 -245861956 + AluSg/x SINE Alu 133 299 -13 216 243 0 57 chr2 7396072 7396142 -245860441 + MIR SINE MIR 108 173 -89 300 262 138 28 chr2 7396452 7396597 -245859986 - MIR SINE MIR -70 192 32 208 284 27 54 chr2 7397907 7397981 -245858602 - MIR SINE MIR -59 149 78 222 298 18 0 chr2 7399453 7399510 -245857073 - MIR SINE MIR -59 149 92 188 292 106 18 chr2 7399948 7400061 -245856522 + MIR SINE MIR 85 207 -55 8057 213 48 37 chr2 7400435 7404290 -245852293 - L1MC1 LINE L1 0 6613 2801 2590 21 10 0 chr2 7404290 7404579 -245852004 - L1PA4 LINE L1 0 6155 5864 8057 213 48 37 chr2 7404579 7406089 -245850494 - L1MC1 LINE L1 -3812 2801 883 1702 197 43 70 chr2 7406089 7406530 -245850053 + MSTB1 LTR MaLR 4 432 0 8057 213 48 37 chr2 7406530 7407394 -245849189 - L1MC1 LINE L1 -5730 883 30 335 305 30 15 chr2 7408260 7408391 -245848192 - MIR SINE MIR -81 181 49 518 271 45 40 chr2 7410569 7410816 -245845767 + LTR16A LTR ERVL 203 450 0 183 331 96 45 chr2 7411392 7411570 -245845013 - L2 LINE L2 -512 2802 2616 198 0 0 0 chr2 7411981 7412003 -245844580 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 1266 184 53 26 chr2 7412350 7412616 -245843967 + AluJb SINE Alu 1 273 -39 316 325 88 18 chr2 7413103 7413217 -245843366 - MER5B DNA MER1_type -3 175 54 241 299 37 110 chr2 7413126 7413290 -245843293 + MER5A DNA MER1_type 38 189 0 * 2356 114 0 0 chr2 7413748 7414054 -245842529 + AluSp SINE Alu 1 306 -7 348 167 0 0 chr2 7414099 7414171 -245842412 + GA-rich Low_complexity Low_complexity 2 73 0 617 250 43 6 chr2 7414173 7414337 -245842246 + MIR SINE MIR 88 257 -5 300 329 71 52 chr2 7414369 7414834 -245841749 - L1MC4a LINE L1 -1914 5894 5421 227 173 19 0 chr2 7415071 7415123 -245841460 + (TAGA)n Simple_repeat Simple_repeat 3 55 0 245 298 25 0 chr2 7415145 7415266 -245841317 + (TAGA)n Simple_repeat Simple_repeat 4 127 0 243 256 61 24 chr2 7415434 7415516 -245841067 + MIR SINE MIR 62 146 -62 258 295 40 0 chr2 7415615 7415714 -245840869 - MIR SINE MIR -88 120 47 22 35 0 0 chr2 7415952 7415981 -245840602 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 7417299 7417320 -245839263 + AT_rich Low_complexity Low_complexity 1 21 0 482 225 152 67 chr2 7417912 7418390 -245838193 + LTR50 LTR ERVL 9 605 -190 340 184 38 0 chr2 7418409 7418496 -245838087 + LTR50 LTR ERVL 435 795 0 647 262 50 54 chr2 7421663 7421961 -245834622 + MER102b DNA MER1_type 37 333 -8 305 222 69 56 chr2 7422253 7422397 -245834186 + L1M4 LINE L1 4129 4274 -1872 283 302 167 49 chr2 7422411 7422809 -245833774 - L2 LINE L2 0 3313 2779 711 281 84 39 chr2 7422912 7423328 -245833255 + LTR16A LTR ERVL 7 441 -9 709 292 112 4 chr2 7423468 7423701 -245832882 - L2 LINE L2 -987 2327 2070 378 329 42 42 chr2 7423732 7424045 -245832538 + L1ME3A LINE L1 5635 5947 -223 1885 139 14 0 chr2 7424180 7424493 -245832090 - AluSx SINE Alu 0 317 1 473 338 29 10 chr2 7424720 7424924 -245831659 - MIR SINE MIR -24 238 31 223 265 60 0 chr2 7425298 7425381 -245831202 - MIR3 SINE MIR -21 187 100 579 267 28 17 chr2 7425418 7425594 -245830989 - MER5B DNA MER1_type 0 178 1 1330 202 5 5 chr2 7425989 7426212 -245830371 - MER58A DNA MER1_type 0 224 2 2025 124 0 0 chr2 7427342 7427659 -245828924 + AluSx SINE Alu 16 332 0 408 336 36 54 chr2 7427984 7428261 -245828322 - L2 LINE L2 0 3272 3001 297 362 52 24 chr2 7430409 7430619 -245825964 + MIR SINE MIR 47 262 0 1735 145 69 0 chr2 7430662 7430952 -245825631 + THE1B LTR MaLR 1 310 -54 674 124 0 0 chr2 7430952 7431049 -245825534 + AluY SINE Alu 213 309 -2 566 69 0 0 chr2 7431052 7431124 -245825459 + THE1B LTR MaLR 293 364 0 198 91 0 0 chr2 7431764 7431797 -245824786 + (CA)n Simple_repeat Simple_repeat 1 33 0 1986 110 43 17 chr2 7432482 7432815 -245823768 - AluSc SINE Alu 0 341 1 442 258 11 84 chr2 7432847 7433025 -245823558 - MLT1J1 LTR MaLR -236 210 46 32 57 0 0 chr2 7433790 7433843 -245822740 + AT_rich Low_complexity Low_complexity 1 53 0 2028 130 0 13 chr2 7434257 7434557 -245822026 - AluSx SINE Alu -16 296 1 378 354 99 9 chr2 7434928 7435151 -245821432 - MIR SINE MIR 0 262 20 693 254 138 27 chr2 7435413 7435673 -245820910 - LTR40a LTR ERVL -120 399 111 291 321 109 12 chr2 7435922 7436262 -245820321 + L1ME4a LINE L1 5542 5914 -207 2064 98 0 17 chr2 7436718 7437050 -245819533 - AluY SINE Alu 0 327 1 838 209 82 19 chr2 7440260 7440466 -245816117 + MER20 DNA MER1_type 1 219 0 293 280 41 113 chr2 7440467 7440671 -245815912 - MIR SINE MIR -40 168 11 258 175 16 63 chr2 7442176 7442239 -245814344 - L2 LINE L2 -7 3265 3206 389 352 6 0 chr2 7443278 7443457 -245813126 + (TG)n Simple_repeat Simple_repeat 1 180 0 209 272 136 47 chr2 7444459 7444672 -245811911 + MIR SINE MIR 3 234 -28 23 54 0 0 chr2 7444963 7445000 -245811583 + AT_rich Low_complexity Low_complexity 1 37 0 514 211 0 10 chr2 7445133 7445237 -245811346 + MER63 DNA MER1_type 21 749 -87 1755 161 10 3 chr2 7446517 7446808 -245809775 - AluSx SINE Alu -19 293 1 238 135 0 0 chr2 7446808 7446845 -245809738 + MSTB LTR MaLR 386 422 -4 259 267 57 19 chr2 7446895 7447000 -245809583 - L1ME LINE L1 -420 5701 5593 188 236 55 0 chr2 7447256 7447311 -245809272 + L2 LINE L2 3254 3311 -2 1741 197 120 63 chr2 7447643 7448201 -245808382 - L1MD2 LINE L1 -10 6743 6154 1877 214 17 74 chr2 7448276 7449039 -245807544 - L1MD2 LINE L1 -488 6148 5416 6549 240 88 40 chr2 7449404 7450417 -245806166 - L1MD2 LINE L1 -1383 5157 4194 6014 104 24 1 chr2 7450417 7451400 -245805183 + L1PA10 LINE L1 5158 6163 -5 6549 240 88 40 chr2 7451400 7453657 -245802926 - L1MD2 LINE L1 -2346 4194 1623 2411 66 7 0 chr2 7453657 7453958 -245802625 + AluY SINE Alu 1 303 -8 6549 240 88 40 chr2 7453958 7455053 -245801530 - L1MD2 LINE L1 -4917 1623 582 207 0 0 0 chr2 7455663 7455686 -245800897 + (T)n Simple_repeat Simple_repeat 1 23 0 28 48 0 0 chr2 7455976 7456018 -245800565 + AT_rich Low_complexity Low_complexity 1 42 0 2416 69 0 0 chr2 7456251 7456539 -245800044 - AluY SINE Alu -12 299 12 362 285 75 100 chr2 7456547 7456936 -245799647 - MLT1J LTR MaLR -132 379 1 920 105 0 0 chr2 7457256 7457389 -245799194 - L1MA3 LINE L1 0 6305 6173 2289 105 0 13 chr2 7459498 7459811 -245796772 + AluSg SINE Alu 1 309 -1 429 302 166 27 chr2 7460124 7460462 -245796121 + MLT1I LTR MaLR 19 403 -6 212 344 21 52 chr2 7460525 7460717 -245795866 - MIR SINE MIR -71 191 6 2459 77 0 0 chr2 7460917 7461228 -245795355 + AluY SINE Alu 1 311 0 2332 149 22 75 chr2 7464125 7464616 -245791967 + MLT1C LTR MaLR 1 465 -2 240 254 0 30 chr2 7466555 7466622 -245789961 + GA-rich Low_complexity Low_complexity 1 65 0 2190 105 3 35 chr2 7467073 7467388 -245789195 + AluSx SINE Alu 1 305 -7 323 236 25 70 chr2 7467781 7467938 -245788645 + L1M4 LINE L1 3077 3226 -2920 314 344 133 16 chr2 7467967 7468403 -245788180 + L1M4 LINE L1 4005 4491 -1655 257 255 213 58 chr2 7469331 7469519 -245787064 + L2 LINE L2 989 1205 -2109 10163 206 52 15 chr2 7469690 7470821 -245785762 + L1 LINE L1 2220 3308 -2838 1631 170 19 47 chr2 7470821 7471139 -245785444 + AluJb SINE Alu 1 309 -3 10163 206 52 15 chr2 7471139 7472506 -245784077 + L1 LINE L1 3308 4810 -1336 788 148 0 0 chr2 7472507 7472642 -245783941 + L1 LINE L1 3625 3759 -2387 227 205 0 0 chr2 7472661 7472700 -245783883 - AluJ/monomer SINE Alu -260 40 2 2959 220 59 7 chr2 7472702 7473444 -245783139 + L1MD2 LINE L1 5576 6356 -3 3211 264 105 27 chr2 7473473 7475378 -245781205 + L1ME1 LINE L1 2362 4410 -1805 2723 221 71 60 chr2 7475388 7475877 -245780706 + L1ME1 LINE L1 4805 5287 -948 195 42 0 0 chr2 7475877 7475901 -245780682 + (TA)n Simple_repeat Simple_repeat 2 25 0 2723 221 71 60 chr2 7475901 7476477 -245780106 + L1ME1 LINE L1 5287 5898 -337 2360 124 23 3 chr2 7476477 7476831 -245779752 + THE1B LTR MaLR 4 364 0 2723 221 71 60 chr2 7476831 7477165 -245779418 + L1ME1 LINE L1 5898 6227 -8 956 113 17 17 chr2 7477280 7477322 -245779261 + (GGAA)n Simple_repeat Simple_repeat 1 219 0 956 113 17 17 chr2 7477322 7477499 -245779084 + (GGAA)n Simple_repeat Simple_repeat 3 179 0 961 129 23 4 chr2 7477759 7477982 -245778601 + GA-rich Low_complexity Low_complexity 3 228 0 531 103 19 37 chr2 7477982 7478089 -245778494 + (GAAAA)n Simple_repeat Simple_repeat 4 108 0 221 320 0 27 chr2 7479551 7479626 -245776957 + L2 LINE L2 3190 3262 -10 212 234 0 0 chr2 7479684 7479731 -245776852 + (TG)n Simple_repeat Simple_repeat 2 48 0 506 257 33 26 chr2 7480498 7480650 -245775933 - MIR SINE MIR -46 216 64 23 33 0 0 chr2 7480671 7480701 -245775882 + AT_rich Low_complexity Low_complexity 1 30 0 808 282 32 70 chr2 7481107 7481519 -245775064 + L2 LINE L2 2915 3310 -3 2747 208 10 32 chr2 7481732 7481913 -245774670 + L1MC1 LINE L1 4982 5166 -1167 1991 109 40 0 chr2 7481913 7482189 -245774394 + AluSx SINE Alu 13 299 -13 2747 208 10 32 chr2 7482189 7482831 -245773752 + L1MC1 LINE L1 5166 5916 -417 630 331 71 21 chr2 7482832 7483161 -245773422 - MLT1G LTR MaLR -289 301 1 1271 266 35 36 chr2 7483286 7483672 -245772911 + L1M4 LINE L1 2971 3357 -2789 2242 89 0 20 chr2 7483672 7483976 -245772607 - AluY SINE Alu -13 298 1 1271 266 35 36 chr2 7483976 7484220 -245772363 + L1M4 LINE L1 3357 3600 -2546 305 221 0 11 chr2 7484220 7484315 -245772268 + (TA)n Simple_repeat Simple_repeat 1 94 0 818 94 109 0 chr2 7484316 7484444 -245772139 + AluY SINE Alu 39 180 -131 30 83 0 0 chr2 7484444 7484480 -245772103 + AT_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr2 7484539 7484564 -245772019 + AT_rich Low_complexity Low_complexity 1 25 0 261 0 0 0 chr2 7484576 7484605 -245771978 + (TA)n Simple_repeat Simple_repeat 2 30 0 841 227 14 5 chr2 7484663 7484870 -245771713 - L1ME1 LINE L1 -223 5943 5735 959 126 0 0 chr2 7485021 7485172 -245771411 + L1PA15 LINE L1 6011 6161 -4 262 89 18 18 chr2 7486291 7486347 -245770236 + (TTTG)n Simple_repeat Simple_repeat 2 57 0 275 250 29 0 chr2 7486547 7486615 -245769968 - MIR SINE MIR -108 154 85 2029 183 22 79 chr2 7487731 7488224 -245768359 - MLT1C LTR MaLR 0 467 3 220 236 0 18 chr2 7488660 7488715 -245767868 + A-rich Low_complexity Low_complexity 2 55 0 189 183 300 0 chr2 7489319 7489379 -245767204 + L2 LINE L2 3204 3281 -32 195 100 0 0 chr2 7489446 7489476 -245767107 + (TGAA)n Simple_repeat Simple_repeat 4 33 0 2882 176 64 3 chr2 7489617 7490388 -245766195 + L1M2 LINE L1 4673 5496 -743 494 170 7 35 chr2 7490530 7490671 -245765912 + GA-rich Low_complexity Low_complexity 2 138 0 402 299 75 31 chr2 7492205 7492489 -245764094 - L1MDa LINE L1 -3854 2686 2395 2140 171 15 20 chr2 7492886 7493370 -245763213 - Tigger2 DNA MER2_type 0 2718 2 857 158 23 0 chr2 7493704 7493881 -245762702 - L1MA7 LINE L1 0 6291 6111 369 384 31 40 chr2 7494239 7494463 -245762120 - L1MDa LINE L1 -5476 1054 833 315 0 0 0 chr2 7494806 7494841 -245761742 + (CA)n Simple_repeat Simple_repeat 2 36 0 231 125 0 0 chr2 7494841 7494881 -245761702 + (GA)n Simple_repeat Simple_repeat 1 40 0 423 239 26 84 chr2 7495441 7495596 -245760987 - MLT1J LTR MaLR -31 480 335 246 345 63 21 chr2 7496137 7496279 -245760304 + MIR SINE MIR 21 168 -94 202 314 144 0 chr2 7496753 7496871 -245759712 + L2 LINE L2 3179 3313 0 347 261 42 42 chr2 7498154 7498173 -245758410 - L1ME4a LINE L1 -213 5908 5890 2041 147 3 0 chr2 7498173 7498466 -245758117 - AluSx SINE Alu -18 294 1 347 261 42 42 chr2 7498466 7498588 -245757995 - L1ME4a LINE L1 -230 5891 5767 1456 227 164 41 chr2 7499074 7499753 -245756830 + LTR41 LTR ERVL 1 762 -11 21 0 0 0 chr2 7500062 7500083 -245756500 + AT_rich Low_complexity Low_complexity 1 21 0 592 286 6 6 chr2 7500243 7500425 -245756158 + MER58A DNA MER1_type 43 224 0 332 350 127 0 chr2 7500551 7500771 -245755812 + MIR SINE MIR 2 249 -13 192 262 66 16 chr2 7500824 7500885 -245755698 - MIR SINE MIR -188 74 11 1412 211 156 70 chr2 7501131 7501733 -245754850 + MLT1E1 LTR MaLR 1 654 0 1711 262 44 30 chr2 7502396 7503006 -245753577 - MLT1E2 LTR MaLR -7 619 1 207 391 64 9 chr2 7504243 7504353 -245752230 + L2 LINE L2 3137 3252 -20 235 367 143 35 chr2 7506590 7507015 -245749568 - L2 LINE L2 -661 2653 2183 209 286 18 0 chr2 7507717 7507773 -245748810 + MER5A DNA MER1_type 9 65 -124 28 29 0 0 chr2 7508215 7508250 -245748333 + AT_rich Low_complexity Low_complexity 1 35 0 216 256 105 12 chr2 7509608 7509694 -245746889 - MIR SINE MIR -61 147 54 295 263 12 12 chr2 7510626 7510706 -245745877 - MIR3 SINE MIR -31 177 98 21 36 0 0 chr2 7512015 7512043 -245744540 + AT_rich Low_complexity Low_complexity 1 28 0 2437 88 3 3 chr2 7513322 7513629 -245742954 - AluSq SINE Alu -6 307 1 343 333 62 23 chr2 7513740 7513917 -245742666 + MIR SINE MIR 46 229 -33 588 197 79 17 chr2 7514113 7514291 -245742292 - MER53 DNA DNA 0 189 1 1938 145 26 57 chr2 7514831 7515217 -245741366 - THE1C LTR MaLR -1 374 1 2281 113 0 3 chr2 7515734 7516035 -245740548 + AluSx SINE Alu 1 300 -12 462 157 0 0 chr2 7516562 7516645 -245739938 + CT-rich Low_complexity Low_complexity 2 84 0 3041 82 42 5 chr2 7516734 7517162 -245739421 - MLT2A1 LTR ERVL 0 444 1 1552 232 132 5 chr2 7517189 7517637 -245738946 - MLT1D LTR MaLR 0 505 1 1821 161 3 25 chr2 7518393 7518709 -245737874 + AluSx SINE Alu 1 309 -3 438 215 27 102 chr2 7518965 7519151 -245737432 - MER69A DNA AcHobo 0 177 6 474 224 5 170 chr2 7519256 7519479 -245737104 + MER5A DNA MER1_type 1 186 -3 5541 62 19 27 chr2 7520393 7521165 -245735418 + MER4E LTR ERV1 1 766 0 1774 225 66 4 chr2 7522399 7522871 -245733712 - L1MC2 LINE L1 -18 6326 5826 2237 242 21 5 chr2 7522878 7523530 -245733053 - L1MC2 LINE L1 -943 5203 4541 351 100 43 0 chr2 7523541 7523611 -245732972 + (TA)n Simple_repeat Simple_repeat 2 74 0 448 104 0 0 chr2 7523669 7523736 -245732847 - L1PA5 LINE L1 -6 6148 6082 2000 24 8 0 chr2 7523736 7523983 -245732600 + L1P2 LINE L1 5369 5617 -537 * 5296 264 22 17 chr2 7523977 7526001 -245730582 - L1MC2 LINE L1 -1589 4557 2524 487 371 79 21 chr2 7526345 7526763 -245729820 - L2 LINE L2 -794 2520 2079 2702 101 15 2 chr2 7527290 7527687 -245728896 - L1MA1 LINE L1 -9 6293 5892 2155 261 69 28 chr2 7527813 7528941 -245727642 - L1ME1 LINE L1 -80 6086 4913 2105 121 3 13 chr2 7530393 7530707 -245725876 - AluY SINE Alu 0 311 1 416 317 194 30 chr2 7532060 7532492 -245724091 - L2 LINE L2 -7 3306 2804 2263 122 42 11 chr2 7532497 7532850 -245723733 - THE1B LTR MaLR 0 364 1 2795 161 73 19 chr2 7532958 7533603 -245722980 + L1MB3 LINE L1 5497 6176 -7 248 258 39 62 chr2 7533609 7533737 -245722846 - L2 LINE L2 -609 2705 2581 694 309 69 69 chr2 7533778 7533888 -245722695 - L2 LINE L2 -1504 1810 1701 207 0 0 0 chr2 7533888 7533911 -245722672 + (TG)n Simple_repeat Simple_repeat 1 23 0 694 309 69 69 chr2 7533911 7534382 -245722201 - L2 LINE L2 -1612 1702 1229 188 244 0 0 chr2 7534397 7534438 -245722145 - MIR SINE MIR -71 191 151 188 217 206 33 chr2 7534619 7534711 -245721872 - MIR SINE MIR -141 121 14 5290 160 10 15 chr2 7535638 7536805 -245719778 + L1MA4 LINE L1 5129 6289 -11 260 212 182 15 chr2 7536937 7537069 -245719514 + L1ME LINE L1 5492 5645 -476 295 250 0 0 chr2 7537476 7537544 -245719039 + MIR SINE MIR 176 243 -19 274 221 26 26 chr2 7537626 7537703 -245718880 + CT-rich Low_complexity Low_complexity 3 79 0 23 0 0 0 chr2 7538906 7538929 -245717654 + AT_rich Low_complexity Low_complexity 1 23 0 190 230 46 92 chr2 7539048 7539135 -245717448 + L2 LINE L2 3231 3313 0 201 356 53 53 chr2 7539215 7539347 -245717236 + L2 LINE L2 3137 3268 -4 1283 226 3 66 chr2 7540471 7540789 -245715794 + AluJb SINE Alu 14 311 -1 474 274 48 12 chr2 7541154 7541322 -245715261 + MLT1I LTR MaLR 201 374 -35 480 198 0 0 chr2 7541324 7541405 -245715178 - FLAM_A SINE Alu -36 106 26 1257 226 54 11 chr2 7541557 7541907 -245714676 - MLT1A1 LTR MaLR 0 365 1 349 309 147 6 chr2 7542612 7542811 -245713772 - MIR SINE MIR -11 251 27 3448 38 38 0 chr2 7542991 7543442 -245713141 + L1P LINE L1 4545 5012 -1134 7657 148 11 46 chr2 7544731 7546215 -245710368 - THE1C-int LTR MaLR -145 1435 4 1761 144 79 20 chr2 7546218 7546572 -245710011 - THE1C LTR MaLR 0 375 1 326 296 82 60 chr2 7546928 7547161 -245709422 + MIR SINE MIR 20 257 -5 1421 248 86 9 chr2 7547197 7547652 -245708931 - MLT1E2 LTR MaLR 0 626 137 182 269 31 125 chr2 7547816 7547976 -245708607 + MIR SINE MIR 68 212 -50 26 0 0 0 chr2 7548109 7548135 -245708448 + AT_rich Low_complexity Low_complexity 1 26 0 12878 167 56 10 chr2 7548136 7554093 -245702490 - L1PB1 LINE L1 -1 6866 636 994 183 5 0 chr2 7554095 7554292 -245702291 - L1PB1 LINE L1 -6663 200 3 184 315 0 19 chr2 7554829 7554883 -245701700 + MIR SINE MIR 23 75 -187 217 320 57 41 chr2 7555182 7555304 -245701279 - MIR SINE MIR -137 125 2 1379 246 47 27 chr2 7556639 7557087 -245699496 + LTR40b LTR ERVL 6 462 0 290 215 31 0 chr2 7557149 7557214 -245699369 + HERVL40 LTR ERVL 2830 2896 -2634 845 265 13 22 chr2 7558304 7558635 -245697948 + HERVL40 LTR ERVL 2779 5505 -25 1107 276 63 15 chr2 7558657 7559067 -245697516 + LTR40b LTR ERVL 1 430 -32 433 257 138 84 chr2 7559091 7559387 -245697196 + L2 LINE L2 2994 3305 -8 2238 119 0 0 chr2 7560885 7561179 -245695404 + AluSg SINE Alu 1 294 -16 312 296 136 12 chr2 7561434 7561603 -245694980 - L1ME2 LINE L1 -226 5938 5749 201 262 0 0 chr2 7563416 7563458 -245693125 + T-rich Low_complexity Low_complexity 3 44 0 662 311 19 0 chr2 7564442 7564654 -245691929 - MIR SINE MIR 0 262 47 364 355 11 26 chr2 7565629 7565818 -245690765 - MER5A DNA MER1_type -3 186 1 1385 259 25 57 chr2 7566272 7567005 -245689578 - L1M4 LINE L1 -2203 4179 3471 2111 132 0 0 chr2 7567184 7567472 -245689111 + AluSx SINE Alu 1 288 -24 26 30 0 0 chr2 7567497 7567530 -245689053 + AT_rich Low_complexity Low_complexity 1 33 0 334 246 165 50 chr2 7567530 7567759 -245688824 - L1ME LINE L1 -5477 593 329 186 43 0 0 chr2 7567759 7567782 -245688801 + (TTCTC)n Simple_repeat Simple_repeat 2 24 0 334 246 165 50 chr2 7567782 7567812 -245688771 - L1ME LINE L1 -5741 329 304 490 281 25 20 chr2 7567824 7568020 -245688563 - L1ME LINE L1 -5867 203 7 245 325 17 38 chr2 7568108 7568348 -245688235 - L1MEc LINE L1 -4781 1436 1202 1191 218 128 22 chr2 7568358 7568725 -245687858 + LTR52 LTR ERVL 1 406 -15 375 336 40 57 chr2 7568834 7569999 -245686584 - L1MEc LINE L1 -5176 1220 76 425 224 9 9 chr2 7570509 7570616 -245685967 + L1M4 LINE L1 4898 5004 -1142 224 308 112 65 chr2 7570767 7570936 -245685647 - L2 LINE L2 -158 3114 2938 248 230 143 0 chr2 7571871 7571997 -245684586 + L1ME4a LINE L1 5977 6120 -1 32 86 0 0 chr2 7572047 7572128 -245684455 + AT_rich Low_complexity Low_complexity 1 81 0 467 89 0 13 chr2 7572940 7573019 -245683564 + (GA)n Simple_repeat Simple_repeat 1 78 0 875 186 94 144 chr2 7573019 7573400 -245683183 - MLT1A1 LTR MaLR -3 362 1 218 200 0 20 chr2 7573400 7573450 -245683133 + GA-rich Low_complexity Low_complexity 1 49 0 1431 50 0 0 chr2 7573491 7573671 -245682912 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 243 88 0 0 chr2 7573671 7573705 -245682878 + (GGGA)n Simple_repeat Simple_repeat 1 34 0 295 250 0 93 chr2 7574699 7574760 -245681823 - L2 LINE L2 -38 3275 3227 2074 169 25 0 chr2 7574760 7575114 -245681469 + THE1B LTR MaLR 2 364 0 295 250 0 93 chr2 7575114 7575160 -245681423 - L2 LINE L2 -86 3227 3178 206 337 11 11 chr2 7575519 7575614 -245680969 - L2 LINE L2 -571 2743 2649 1776 181 68 32 chr2 7575855 7576296 -245680287 - LTR2B LTR ERV1 0 490 34 955 322 123 4 chr2 7576678 7577132 -245679451 + L2 LINE L2 2208 2715 -599 21 36 0 0 chr2 7577133 7577161 -245679422 + AT_rich Low_complexity Low_complexity 1 28 0 301 349 90 42 chr2 7577569 7577758 -245678825 - L2 LINE L2 0 3272 3075 359 195 0 12 chr2 7578315 7578397 -245678186 - L1MA5 LINE L1 -6 6294 6214 1297 194 3 3 chr2 7578397 7578681 -245677902 + L1 LINE L1 4960 5243 -903 183 333 0 0 chr2 7579997 7580060 -245676523 + L2 LINE L2 3176 3238 -75 5290 66 25 29 chr2 7581731 7582500 -245674083 - MER4E LTR ERV1 0 766 1 561 240 5 163 chr2 7583411 7583632 -245672951 - MER5A DNA MER1_type -3 186 1 430 192 30 114 chr2 7583737 7583904 -245672679 + MER69A DNA AcHobo 6 158 -19 429 137 26 0 chr2 7583947 7584064 -245672519 + (TA)n Simple_repeat Simple_repeat 1 120 0 208 356 0 11 chr2 7584348 7584438 -245672145 + L2 LINE L2 3213 3301 -12 358 328 78 10 chr2 7584520 7584724 -245671859 - MIR SINE MIR -39 223 6 2328 105 3 0 chr2 7584761 7585065 -245671518 + AluSp SINE Alu 4 308 -5 525 145 37 0 chr2 7586043 7586241 -245670342 + (TA)n Simple_repeat Simple_repeat 1 205 0 35 0 0 0 chr2 7586215 7586250 -245670333 + AT_rich Low_complexity Low_complexity 1 35 0 * 205 293 158 12 chr2 7588450 7588532 -245668051 - L2 LINE L2 -4 3268 3175 23 0 0 0 chr2 7588771 7588794 -245667789 + AT_rich Low_complexity Low_complexity 1 23 0 225 191 0 0 chr2 7589369 7589411 -245667172 + (CA)n Simple_repeat Simple_repeat 2 43 0 1977 147 7 0 chr2 7590097 7590390 -245666193 - AluSx SINE Alu -17 295 1 721 242 28 22 chr2 7590479 7590661 -245665922 + MER5A DNA MER1_type 1 183 -6 513 139 13 0 chr2 7591299 7591378 -245665205 + MADE1 DNA Mariner 1 80 0 196 333 26 9 chr2 7591422 7591536 -245665047 - MIR3 SINE MIR -6 202 87 504 287 187 5 chr2 7591708 7591917 -245664666 - Charlie8 DNA MER1_type -2161 256 10 343 333 0 0 chr2 7592260 7592350 -245664233 - MER5B DNA MER1_type -25 153 64 21 0 0 0 chr2 7593150 7593171 -245663412 + AT_rich Low_complexity Low_complexity 1 21 0 694 315 58 46 chr2 7593514 7593930 -245662653 - L2 LINE L2 -804 2510 2090 225 180 0 0 chr2 7593943 7593993 -245662590 + (TA)n Simple_repeat Simple_repeat 2 51 0 184 284 149 0 chr2 7593996 7594130 -245662453 + L2 LINE L2 3098 3251 -62 326 298 114 46 chr2 7594278 7595938 -245660645 + L1M2 LINE L1 3806 5573 -584 300 304 163 28 chr2 7595951 7596240 -245660343 + L1ME3A LINE L1 5619 5946 -224 3329 129 18 60 chr2 7596659 7597209 -245659374 - MER1A DNA MER1_type 0 527 1 670 314 9 14 chr2 7598261 7598481 -245658102 + MIR SINE MIR 31 249 -13 228 35 0 0 chr2 7599700 7599729 -245656854 + (TG)n Simple_repeat Simple_repeat 1 29 0 2259 149 21 21 chr2 7600103 7600478 -245656105 - THE1C LTR MaLR 0 375 1 497 299 35 70 chr2 7600876 7601271 -245655312 - L1MC/D LINE L1 -330 5791 5411 255 150 0 0 chr2 7601906 7601946 -245654637 + L2 LINE L2 3255 3294 -19 1107 153 0 0 chr2 7602493 7602677 -245653906 - AluSg/x SINE Alu 0 314 131 363 268 53 72 chr2 7602829 7603038 -245653545 - MLT1I LTR MaLR -14 395 191 327 49 0 0 chr2 7603305 7603346 -245653237 + (TC)n Simple_repeat Simple_repeat 1 41 0 246 32 0 0 chr2 7603345 7603376 -245653207 + (CA)n Simple_repeat Simple_repeat 1 31 0 * 2155 113 0 7 chr2 7604055 7604347 -245652236 + AluSg SINE Alu 1 290 -20 285 292 0 21 chr2 7604434 7604530 -245652053 - MLT1J LTR MaLR -145 366 273 259 300 11 11 chr2 7604591 7604681 -245651902 - MLT1L LTR MaLR -354 261 172 1841 131 34 14 chr2 7604709 7605000 -245651583 - AluJo SINE Alu -4 308 12 484 295 62 29 chr2 7605140 7605381 -245651202 + MIR SINE MIR 2 250 -12 393 319 223 15 chr2 7605739 7606325 -245650258 + L2 LINE L2 2593 3308 -5 291 318 70 0 chr2 7607459 7607588 -245648995 - MIR SINE MIR -75 187 50 693 143 9 9 chr2 7607752 7607864 -245648719 - AluSg/x SINE Alu -12 300 189 1396 176 36 112 chr2 7608660 7609053 -245647530 + MLT1A1 LTR MaLR 3 365 0 351 229 201 14 chr2 7609186 7609330 -245647253 + MIR SINE MIR 22 192 -70 208 361 0 10 chr2 7612985 7613082 -245643501 + L2 LINE L2 3168 3263 -50 522 284 36 105 chr2 7613339 7613701 -245642882 + MLT1I LTR MaLR 71 407 -2 227 315 120 9 chr2 7614051 7614159 -245642424 - L2 LINE L2 0 3313 3194 632 228 55 22 chr2 7614164 7614346 -245642237 + MER3 DNA MER1_type 1 141 -68 309 281 110 44 chr2 7614584 7614901 -245641682 - L2 LINE L2 -126 3187 2850 25 31 0 0 chr2 7615210 7615242 -245641341 + AT_rich Low_complexity Low_complexity 1 32 0 32 0 0 0 chr2 7615954 7615986 -245640597 + AT_rich Low_complexity Low_complexity 1 32 0 1609 196 7 4 chr2 7615988 7616269 -245640314 - AluJo SINE Alu -30 282 1 305 248 137 0 chr2 7618274 7618391 -245638192 + L2 LINE L2 2060 2192 -1122 839 287 90 61 chr2 7618500 7618544 -245638039 + L2 LINE L2 2575 2616 -697 1032 269 108 70 chr2 7618544 7619071 -245637512 + MLT1H LTR MaLR 1 547 -2 839 287 90 61 chr2 7619071 7619734 -245636849 + L2 LINE L2 2616 3313 0 2163 140 33 36 chr2 7619848 7620212 -245636371 - THE1B LTR MaLR -1 363 1 22 0 0 0 chr2 7620348 7620370 -245636213 + AT_rich Low_complexity Low_complexity 1 22 0 525 324 155 44 chr2 7620662 7621509 -245635074 + L3 LINE CR1 634 1574 -3 495 348 79 12 chr2 7621853 7622106 -245634477 + L3 LINE CR1 364 633 -944 382 279 82 123 chr2 7622265 7622365 -245634218 + L3 LINE CR1 931 1034 -543 2044 126 0 3 chr2 7622365 7622650 -245633933 + AluSc SINE Alu 1 284 -25 315 0 0 0 chr2 7622654 7622689 -245633894 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 382 279 82 123 chr2 7622689 7622924 -245633659 + L3 LINE CR1 1037 1257 -320 266 283 57 9 chr2 7624899 7625005 -245631578 - MIR SINE MIR -47 215 105 429 305 92 17 chr2 7625167 7625341 -245631242 - MIR SINE MIR -28 234 48 271 396 35 30 chr2 7626892 7627061 -245629522 + MIR3 SINE MIR 8 177 -31 248 323 32 0 chr2 7627274 7627367 -245629216 - MIR SINE MIR -76 186 91 230 252 50 59 chr2 7627692 7627811 -245628772 - MIR SINE MIR -29 233 116 328 278 56 76 chr2 7627965 7628267 -245628316 + MLT1I LTR MaLR 97 392 -17 27 22 0 22 chr2 7628494 7628515 -245628068 + AT_rich Low_complexity Low_complexity 1 21 -23 2205 97 7 0 chr2 7628515 7628804 -245627779 - AluSg SINE Alu -19 291 1 27 22 0 22 chr2 7628804 7628827 -245627756 + AT_rich Low_complexity Low_complexity 21 44 0 373 324 9 0 chr2 7629500 7629611 -245626972 + MER81 DNA DNA 3 114 0 364 273 23 0 chr2 7629906 7629994 -245626589 + MER5B DNA MER1_type 17 106 -72 184 308 0 0 chr2 7630051 7630103 -245626480 + MER5B DNA MER1_type 126 177 -1 2677 215 21 57 chr2 7631244 7631871 -245624712 + MER77 LTR ERV1 2 605 0 2130 149 41 3 chr2 7631896 7632238 -245624345 - THE1A LTR MaLR 0 355 1 12009 106 11 0 chr2 7632238 7633800 -245622783 - THE1A-int LTR MaLR 0 1580 1 2423 119 35 6 chr2 7633801 7634145 -245622438 - THE1A LTR MaLR -1 354 1 651 291 29 107 chr2 7634858 7635380 -245621203 + MER34 LTR ERV1 1 481 -61 1371 186 41 11 chr2 7635486 7635755 -245620828 - AluJb SINE Alu -24 288 12 2653 108 6 0 chr2 7635755 7636108 -245620475 - THE1A LTR MaLR 0 355 1 12322 95 10 1 chr2 7636108 7637672 -245618911 - THE1A-int LTR MaLR 0 1580 3 2544 108 35 3 chr2 7637674 7638018 -245618565 - THE1A LTR MaLR 0 355 1 1706 178 3 3 chr2 7639262 7639548 -245617035 - AluJb SINE Alu -11 301 16 198 288 51 0 chr2 7639748 7639807 -245616776 + L2 LINE L2 3252 3313 0 218 377 28 0 chr2 7640486 7640592 -245615991 - L2 LINE L2 -5 3308 3200 249 128 0 0 chr2 7640992 7641039 -245615544 + (TG)n Simple_repeat Simple_repeat 2 48 0 287 319 109 57 chr2 7641389 7641775 -245614808 - L2 LINE L2 -8 3305 2900 21 0 0 0 chr2 7642327 7642348 -245614235 + AT_rich Low_complexity Low_complexity 1 21 0 221 160 0 20 chr2 7642589 7642639 -245613944 + CT-rich Low_complexity Low_complexity 3 51 0 914 280 114 15 chr2 7642696 7643305 -245613278 - L1ME3A LINE L1 -226 5944 5262 2140 131 111 57 chr2 7643381 7643787 -245612796 - MSTA LTR MaLR 0 428 1 1562 226 30 117 chr2 7644174 7645013 -245611570 - L1ME3A LINE L1 -1483 4663 3898 4263 165 20 17 chr2 7645013 7645728 -245610855 + MER50 LTR ERV1 1 717 -17 659 251 53 5 chr2 7645733 7645940 -245610643 - L1ME3A LINE L1 -2254 3892 3676 691 213 38 6 chr2 7645941 7646101 -245610482 - LTR52 LTR ERVL -2 419 255 918 251 109 34 chr2 7646229 7646795 -245609788 - L1ME3A LINE L1 -2468 3678 3070 453 220 159 28 chr2 7647691 7647873 -245608710 - L1M4 LINE L1 -1479 4667 4462 304 302 163 6 chr2 7647984 7648156 -245608427 - L3 LINE CR1 -97 1480 1282 203 217 65 0 chr2 7648819 7648865 -245607718 - MIR SINE MIR -88 174 126 228 319 34 25 chr2 7649110 7649229 -245607354 - MIR SINE MIR -34 228 109 2195 172 40 27 chr2 7649229 7649772 -245606811 + MLT2A2 LTR ERVL 1 554 0 4020 154 53 80 chr2 7649870 7650674 -245605909 - LTR1 LTR ERV1 0 785 3 2145 156 21 32 chr2 7650986 7651365 -245605218 - THE1C LTR MaLR 0 375 1 2807 95 8 0 chr2 7652000 7652359 -245604224 + THE1B LTR MaLR 1 362 -2 246 235 73 0 chr2 7652434 7652502 -245604081 - MIR SINE MIR -117 91 19 1614 114 5 0 chr2 7654748 7654967 -245601616 + AluSq SINE Alu 78 297 -16 734 260 29 19 chr2 7656300 7656508 -245600075 - MER63A DNA MER1_type 0 210 1 387 0 0 0 chr2 7656802 7656845 -245599738 + (CA)n Simple_repeat Simple_repeat 1 43 0 27 29 0 0 chr2 7658986 7659020 -245597563 + AT_rich Low_complexity Low_complexity 1 34 0 2901 198 101 26 chr2 7659478 7660219 -245596364 + MER63D DNA MER1_type 1 797 -264 564 229 0 0 chr2 7660217 7660322 -245596261 + MER63D DNA MER1_type 954 1058 -2 * 213 39 0 0 chr2 7661044 7661070 -245595513 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 182 36 0 36 chr2 7661663 7661691 -245594892 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 198 299 42 49 chr2 7661881 7662025 -245594558 + MIR SINE MIR 20 162 -100 237 257 138 18 chr2 7663267 7663376 -245593207 + L3 LINE CR1 1406 1527 -50 218 235 20 0 chr2 7666339 7666390 -245590193 + CT-rich Low_complexity Low_complexity 3 54 0 363 314 109 46 chr2 7667175 7667313 -245589270 + MIR SINE MIR 7 160 -102 2209 106 27 7 chr2 7667313 7667614 -245588969 + AluSg SINE Alu 1 307 -3 363 314 109 46 chr2 7667614 7667650 -245588933 + MIR SINE MIR 160 192 -70 193 279 63 13 chr2 7667878 7667957 -245588626 + L2 LINE L2 2772 2854 -460 221 351 98 44 chr2 7668026 7668251 -245588332 + L2 LINE L2 3004 3240 -32 2270 121 0 0 chr2 7668320 7668625 -245587958 - AluSg SINE Alu -5 305 1 848 145 0 0 chr2 7669136 7669313 -245587270 + AluSg/x SINE Alu 166 310 0 380 336 23 0 chr2 7669313 7669441 -245587142 - L2 LINE L2 -620 2694 2564 1013 159 25 0 chr2 7669466 7669623 -245586960 - AluSg/x SINE Alu -14 298 138 1793 283 114 34 chr2 7669626 7670540 -245586043 - L2 LINE L2 -773 2541 1555 525 121 0 0 chr2 7671102 7671185 -245585398 + (TTTC)n Simple_repeat Simple_repeat 1 83 0 843 114 13 7 chr2 7671202 7671351 -245585232 + (TTCTC)n Simple_repeat Simple_repeat 5 154 0 1357 160 94 22 chr2 7671353 7671628 -245584955 - AluJo SINE Alu -17 295 1 252 143 45 36 chr2 7671810 7671922 -245584661 + (TA)n Simple_repeat Simple_repeat 2 114 0 252 317 108 17 chr2 7671938 7672058 -245584525 - MIR SINE MIR -112 150 20 26 50 0 0 chr2 7672225 7672265 -245584318 + AT_rich Low_complexity Low_complexity 1 40 0 210 273 0 0 chr2 7672682 7672737 -245583846 + (TA)n Simple_repeat Simple_repeat 2 56 0 1944 131 0 4 chr2 7672896 7673171 -245583412 - AluSx SINE Alu -38 274 1 237 65 0 0 chr2 7673738 7673769 -245582814 + (TG)n Simple_repeat Simple_repeat 2 32 0 251 170 0 0 chr2 7673932 7673979 -245582604 + L1ME LINE L1 98 144 -5926 190 158 0 26 chr2 7674304 7674342 -245582241 + MIR SINE MIR 112 148 -60 279 292 94 74 chr2 7675329 7675531 -245581052 - MIR3 SINE MIR -2 206 1 304 277 56 97 chr2 7675926 7676010 -245580573 - MIR SINE MIR -13 249 163 1572 207 53 68 chr2 7676010 7676406 -245580177 - MLT1B LTR MaLR 0 390 1 304 277 56 97 chr2 7676406 7676516 -245580067 - MIR SINE MIR -99 163 63 287 336 88 13 chr2 7677324 7677550 -245579033 + MIR SINE MIR 10 252 -10 1693 178 0 0 chr2 7677592 7677868 -245578715 + AluJo SINE Alu 31 306 -6 252 289 218 13 chr2 7678474 7678630 -245577953 - MIR SINE MIR -72 190 3 354 306 108 35 chr2 7678638 7678870 -245577713 - MIR SINE MIR 0 262 14 2261 135 42 8 chr2 7678870 7679247 -245577336 - MLT1B LTR MaLR 0 390 1 2170 105 3 22 chr2 7680783 7681098 -245575485 + AluSx SINE Alu 1 309 -3 1125 282 61 16 chr2 7682173 7682738 -245573845 + MER20B DNA MER1_type 10 643 -140 815 174 0 36 chr2 7682756 7682894 -245573689 + FLAM_C SINE Alu 1 133 0 329 321 95 54 chr2 7683376 7683744 -245572839 - L1ME LINE L1 -460 5702 5320 232 281 61 79 chr2 7685039 7685153 -245571430 - L2 LINE L2 -31 3282 3171 409 299 44 0 chr2 7685498 7685635 -245570948 - MIR3 SINE MIR -50 158 16 204 40 0 0 chr2 7685745 7685770 -245570813 + (ATTG)n Simple_repeat Simple_repeat 2 26 0 190 269 128 13 chr2 7685880 7685958 -245570625 + L2 LINE L2 3147 3233 -39 821 277 139 30 chr2 7686074 7686543 -245570040 - LTR33A LTR ERVL 0 523 4 243 330 161 0 chr2 7687295 7687513 -245569070 - MIR SINE MIR -1 261 9 2366 86 201 5 chr2 7687739 7688113 -245568470 - LTR7 LTR ERV1 -3 447 1 360 307 97 38 chr2 7688129 7688367 -245568216 - MIR SINE MIR -9 253 2 219 337 142 30 chr2 7689894 7690063 -245566520 - MIR3 SINE MIR -11 197 10 546 157 9 52 chr2 7690503 7690618 -245565965 - MER3 DNA MER1_type -1 208 99 249 108 0 0 chr2 7690618 7690655 -245565928 + (T)n Simple_repeat Simple_repeat 1 37 0 6465 108 15 14 chr2 7690658 7692122 -245564461 - L1PA15 LINE L1 0 6165 4678 616 184 37 0 chr2 7692122 7692231 -245564352 - MER3 DNA MER1_type -96 113 1 216 331 66 54 chr2 7692403 7692569 -245564014 + L2 LINE L2 3098 3265 -7 1660 166 21 21 chr2 7692831 7693114 -245563469 + MER49 LTR ERV1 3 285 -638 1455 219 20 34 chr2 7693144 7693496 -245563087 + MER4D LTR ERV1 549 895 -8 400 181 52 26 chr2 7694159 7694275 -245562308 - LTR48 LTR ERV1 -48 739 621 1482 131 146 33 chr2 7694302 7694636 -245561947 - LTR49 LTR ERV1 -251 344 1 26 30 0 0 chr2 7694647 7694680 -245561903 + AT_rich Low_complexity Low_complexity 1 33 0 417 20 0 0 chr2 7696655 7696705 -245559878 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 804 240 16 87 chr2 7696799 7697041 -245559542 + AluJo SINE Alu 47 271 -41 664 241 48 28 chr2 7697090 7697387 -245559196 - L1M4 LINE L1 -2797 3349 3042 2544 58 0 0 chr2 7697387 7697695 -245558888 - AluY SINE Alu -3 308 1 664 241 48 28 chr2 7697695 7697749 -245558834 - L1M4 LINE L1 -3104 3042 2991 226 307 107 60 chr2 7697856 7698006 -245558577 + MIR SINE MIR 28 184 -78 385 274 109 57 chr2 7698219 7698449 -245558134 - MIR SINE MIR -9 253 12 265 273 75 68 chr2 7699240 7699401 -245557182 + MIR3 SINE MIR 3 164 -44 2191 109 7 0 chr2 7699857 7700150 -245556433 + AluSx SINE Alu 5 299 -13 1831 189 46 38 chr2 7700723 7701094 -245555489 + MLT1A2 LTR MaLR 1 374 0 3451 118 70 62 chr2 7701530 7701845 -245554738 - LTR29 LTR ERV1 0 622 298 2038 110 69 7 chr2 7701845 7702136 -245554447 - AluSq SINE Alu 0 313 5 3451 118 70 62 chr2 7702136 7702437 -245554146 - LTR29 LTR ERV1 -324 298 1 1643 210 52 9 chr2 7702609 7702957 -245553626 + MLT1A1 LTR MaLR 1 363 -2 664 271 66 6 chr2 7703610 7703776 -245552807 - AluJb SINE Alu 0 312 137 252 337 12 0 chr2 7704084 7704170 -245552413 + MIR SINE MIR 30 116 -92 2386 133 10 41 chr2 7704485 7704898 -245551685 + MER57A LTR ERV1 4 403 0 1863 116 0 8 chr2 7706433 7706691 -245549892 + AluSc SINE Alu 44 299 -10 25 65 0 0 chr2 7707116 7707162 -245549421 + AT_rich Low_complexity Low_complexity 1 46 0 585 237 95 25 chr2 7707349 7707570 -245549013 - L1MC4a LINE L1 -5 7803 6111 649 87 22 0 chr2 7707623 7707715 -245548868 - AluSc SINE Alu -7 302 209 228 35 0 0 chr2 7707747 7707776 -245548807 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 305 123 70 0 chr2 7707776 7707833 -245548750 - AluJ/FRAM SINE Alu -16 286 226 2135 82 7 21 chr2 7708200 7708491 -245548092 - AluSg SINE Alu -23 287 1 21 0 0 0 chr2 7708497 7708518 -245548065 + AT_rich Low_complexity Low_complexity 1 21 0 626 294 70 22 chr2 7709005 7709233 -245547350 - MIR SINE MIR -21 241 3 38 0 0 0 chr2 7709351 7709389 -245547194 + AT_rich Low_complexity Low_complexity 1 38 0 5840 32 5 0 chr2 7709389 7710040 -245546543 - L1PA5 LINE L1 -11 6143 5490 189 338 50 12 chr2 7710306 7710386 -245546197 - L2 LINE L2 -222 3050 2968 843 152 0 8 chr2 7710443 7710575 -245546008 - AluJb SINE Alu -181 131 1 2509 117 29 49 chr2 7710693 7711078 -245545505 + MER51B LTR ERV1 1 377 0 1814 153 28 93 chr2 7711292 7711691 -245544892 - THE1C LTR MaLR -2 373 1 306 164 0 0 chr2 7712449 7712504 -245544079 + T-rich Low_complexity Low_complexity 1 55 0 268 316 175 0 chr2 7713264 7713378 -245543205 + MIR3 SINE MIR 56 189 -19 3600 193 64 3 chr2 7713441 7714129 -245542454 - MER44D DNA MER2_type 0 605 4 1811 179 47 6 chr2 7715087 7715451 -245541132 + MLT1B LTR MaLR 1 379 -11 755 184 40 40 chr2 7715669 7715843 -245540740 + MER5B DNA MER1_type 5 178 0 218 32 32 0 chr2 7717547 7717578 -245539005 + (TG)n Simple_repeat Simple_repeat 2 33 0 226 254 0 0 chr2 7717711 7717766 -245538817 + (TA)n Simple_repeat Simple_repeat 1 55 0 2185 102 30 0 chr2 7717918 7718213 -245538370 + AluSx SINE Alu 1 304 -8 245 341 0 24 chr2 7718242 7718368 -245538215 + MIR SINE MIR 2 122 -86 1569 186 0 28 chr2 7718941 7719231 -245537352 + AluJo SINE Alu 1 282 -30 1375 202 4 0 chr2 7719350 7719583 -245537000 + MER46A DNA MER2_type 3 236 0 370 302 119 13 chr2 7719812 7719971 -245536612 - MIR SINE MIR -77 185 10 387 287 16 23 chr2 7721210 7721339 -245535244 - MIR SINE MIR -107 155 28 234 320 24 40 chr2 7721951 7722076 -245534507 + MIR SINE MIR 22 144 -118 245 322 70 35 chr2 7722388 7722503 -245534080 + MIR SINE MIR 62 180 -82 1411 256 77 35 chr2 7723900 7724435 -245532148 - MER77 LTR ERV1 -4 601 45 354 378 18 9 chr2 7724438 7724655 -245531928 + L2 LINE L2 2579 2797 -517 31 0 0 0 chr2 7724717 7724748 -245531835 + AT_rich Low_complexity Low_complexity 1 31 0 277 317 67 8 chr2 7724972 7725092 -245531491 + MIR SINE MIR 2 128 -134 2420 82 0 22 chr2 7725154 7725470 -245531113 - AluSg SINE Alu -1 309 1 260 299 0 0 chr2 7725508 7725575 -245531008 - L2 LINE L2 -48 3265 3199 188 300 17 17 chr2 7726355 7726415 -245530168 + MIR SINE MIR 8 67 -195 1016 171 17 11 chr2 7726811 7726992 -245529591 + AluJo SINE Alu 99 280 -32 257 0 30 0 chr2 7727167 7727200 -245529383 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 315 65 0 0 chr2 7727621 7727667 -245528916 - MADE1 DNA Mariner -34 46 1 204 338 0 0 chr2 7728730 7728798 -245527785 - L2 LINE L2 -216 3056 2989 241 373 127 19 chr2 7730261 7730473 -245526110 - MIR SINE MIR -8 254 20 184 53 53 26 chr2 7730488 7730526 -245526057 + T-rich Low_complexity Low_complexity 2 40 0 1455 164 52 36 chr2 7730603 7730908 -245525675 + THE1C LTR MaLR 66 375 0 183 415 0 0 chr2 7730971 7731024 -245525559 - L2 LINE L2 -99 3173 3121 275 294 53 29 chr2 7731035 7731205 -245525378 - L2 LINE L2 -1 3312 3139 5587 167 30 8 chr2 7732176 7732341 -245524242 - L1MA10 LINE L1 -1 6333 6173 306 50 0 0 chr2 7732341 7732381 -245524202 + (TG)n Simple_repeat Simple_repeat 2 41 0 5587 167 30 8 chr2 7732381 7733223 -245523360 - L1MA10 LINE L1 -161 6173 5304 1852 182 34 16 chr2 7733270 7733655 -245522928 + L1 LINE L1 4867 5258 -888 204 41 61 61 chr2 7733947 7733996 -245522587 + A-rich Low_complexity Low_complexity 1 49 0 354 297 90 49 chr2 7734985 7735251 -245521332 - MLT1I LTR MaLR -35 374 98 332 292 71 42 chr2 7736120 7736288 -245520295 + L2 LINE L2 2587 2759 -555 346 292 28 130 chr2 7736391 7736684 -245519899 + L2 LINE L2 2793 3054 -218 308 295 139 16 chr2 7736818 7736940 -245519643 + L2 LINE L2 3136 3272 0 186 43 0 0 chr2 7737758 7737781 -245518802 + (T)n Simple_repeat Simple_repeat 1 23 0 23 0 0 0 chr2 7738138 7738161 -245518422 + AT_rich Low_complexity Low_complexity 1 23 0 1278 177 83 36 chr2 7738587 7738864 -245517719 - AluJo SINE Alu -19 293 4 1842 166 42 101 chr2 7739080 7739220 -245517363 - MER57A LTR ERV1 0 403 256 2323 117 0 0 chr2 7739220 7739528 -245517055 + AluSx SINE Alu 1 308 -4 264 30 0 0 chr2 7739528 7739561 -245517022 + (GA)n Simple_repeat Simple_repeat 2 34 0 1842 166 42 101 chr2 7739561 7739847 -245516736 - MER57A LTR ERV1 -145 258 1 377 332 47 33 chr2 7740893 7741257 -245515326 + L1ME LINE L1 4104 4472 -1674 22 0 0 0 chr2 7741689 7741711 -245514872 + AT_rich Low_complexity Low_complexity 1 22 0 647 216 78 6 chr2 7741744 7741911 -245514672 + MER3 DNA MER1_type 31 209 0 245 279 124 43 chr2 7742063 7742224 -245514359 + L1ME LINE L1 5555 5728 -393 279 185 21 69 chr2 7742432 7742621 -245513962 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 816 181 0 36 chr2 7743120 7743258 -245513325 - FLAM_C SINE Alu 0 133 1 300 312 89 51 chr2 7743814 7743971 -245512612 - MIR3 SINE MIR -11 197 35 226 122 24 24 chr2 7744352 7744393 -245512190 + MLT1G LTR MaLR 550 590 0 330 311 0 66 chr2 7744631 7744782 -245511801 + MLT-int LTR MaLR 423 578 -793 367 266 131 88 chr2 7745363 7745683 -245510900 + MLT1E-int LTR MaLR 1032 1365 -6 258 244 13 42 chr2 7746050 7746085 -245510498 + MLT1G1 LTR MaLR 463 498 -97 2671 107 27 36 chr2 7746085 7746497 -245510086 + L1PA13 LINE L1 5752 6159 -4 258 244 13 42 chr2 7746497 7746558 -245510025 + MLT1G1 LTR MaLR 498 595 0 587 284 75 8 chr2 7746563 7746802 -245509781 + HAL1 LINE L1 1505 1759 -748 846 171 20 0 chr2 7746802 7746954 -245509629 + LTR49 LTR ERV1 1 155 -440 245 283 30 20 chr2 7747876 7747975 -245508608 - L2 LINE L2 -243 3070 2971 231 335 279 3 chr2 7748166 7748453 -245508130 + L2 LINE L2 2371 2736 -578 329 314 168 55 chr2 7748570 7749316 -245507267 - L2 LINE L2 0 3313 2480 462 255 162 10 chr2 7750047 7750373 -245506210 - L1MEc LINE L1 -1599 4616 4227 293 319 102 35 chr2 7750616 7751243 -245505340 - L1MEc LINE L1 -3138 3077 2409 1456 284 98 34 chr2 7751292 7751845 -245504738 + MLT1E LTR MaLR 6 593 0 301 280 28 42 chr2 7751845 7751988 -245504595 - L1MEc LINE L1 -4051 2345 2205 334 227 129 30 chr2 7752703 7752835 -245503748 - L1MC5 LINE L1 -35 7926 7782 523 240 7 13 chr2 7753410 7753564 -245503019 - L1MB8 LINE L1 -2 6176 6024 379 301 101 50 chr2 7753683 7754015 -245502568 - L1M4 LINE L1 -1712 4434 4120 2308 123 48 28 chr2 7754015 7754372 -245502211 - THE1B LTR MaLR 0 364 1 11887 109 4 5 chr2 7754372 7755954 -245500629 - THE1B-int LTR MaLR 0 1580 1 2326 121 51 28 chr2 7755954 7756310 -245500273 - THE1B LTR MaLR 0 364 1 379 301 101 50 chr2 7756310 7756689 -245499894 - L1M4 LINE L1 -2025 4121 3685 24 0 0 0 chr2 7756980 7757004 -245499579 + AT_rich Low_complexity Low_complexity 1 24 0 276 277 27 45 chr2 7757402 7757514 -245499069 - L1M4 LINE L1 -1907 4239 4130 191 279 82 33 chr2 7757538 7757599 -245498984 - L2 LINE L2 -49 3223 3160 248 320 103 16 chr2 7757650 7757844 -245498739 + L2 LINE L2 3102 3312 -1 473 337 10 10 chr2 7757848 7758047 -245498536 + MER58A DNA MER1_type 4 202 -22 540 85 11 79 chr2 7759127 7759304 -245497279 + (CACAC)n Simple_repeat Simple_repeat 1 165 0 200 136 51 17 chr2 7759307 7759366 -245497217 + (CA)n Simple_repeat Simple_repeat 1 61 0 233 299 21 25 chr2 7759380 7759522 -245497061 + CT-rich Low_complexity Low_complexity 4 236 0 226 113 56 14 chr2 7759941 7760012 -245496571 + (CA)n Simple_repeat Simple_repeat 2 75 0 451 130 67 27 chr2 7760024 7760497 -245496086 + (CA)n Simple_repeat Simple_repeat 1 491 0 221 260 0 0 chr2 7761726 7761776 -245494807 + (TGAA)n Simple_repeat Simple_repeat 1 50 0 2041 129 86 9 chr2 7761849 7762197 -245494386 - THE1C LTR MaLR 0 375 1 23 33 0 0 chr2 7762624 7762654 -245493929 + AT_rich Low_complexity Low_complexity 1 30 0 307 315 31 39 chr2 7763780 7763907 -245492676 - MIR SINE MIR -66 142 17 299 276 35 43 chr2 7764242 7764358 -245492225 - MIR3 SINE MIR -81 127 13 870 282 32 16 chr2 7764526 7764778 -245491805 - MIR SINE MIR -4 258 3 842 174 114 0 chr2 7765787 7765954 -245490629 + MER5A DNA MER1_type 1 186 -3 210 37 0 0 chr2 7766329 7766356 -245490227 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 180 0 0 0 chr2 7766674 7766694 -245489889 + (TTTC)n Simple_repeat Simple_repeat 2 21 0 256 246 60 78 chr2 7766749 7766916 -245489667 - L2 LINE L2 -33 3280 3117 189 250 0 0 chr2 7767116 7767152 -245489431 - L2 LINE L2 -96 3217 3182 190 320 100 0 chr2 7767206 7767306 -245489277 - L2 LINE L2 -168 3104 2995 237 306 0 0 chr2 7767346 7767408 -245489175 + G-rich Low_complexity Low_complexity 1 62 0 371 231 56 37 chr2 7768179 7768287 -245488296 - LTR41 LTR ERVL -6 767 658 282 139 0 0 chr2 7768936 7768979 -245487604 - LTR41 LTR ERVL -730 43 1 28 71 0 0 chr2 7769107 7769163 -245487420 + AT_rich Low_complexity Low_complexity 1 56 0 2160 146 47 16 chr2 7769358 7769722 -245486861 + THE1C LTR MaLR 1 375 0 2437 132 0 0 chr2 7769748 7770105 -245486478 + THE1C-int LTR MaLR 15 371 -1209 602 150 71 7 chr2 7770232 7770372 -245486211 + THE1C-int LTR MaLR 1432 1580 0 2015 145 67 20 chr2 7770372 7770730 -245485853 + THE1C LTR MaLR 1 375 0 750 313 55 19 chr2 7770744 7771051 -245485532 + L2 LINE L2 2996 3313 0 1415 226 92 15 chr2 7771539 7771876 -245484707 + MLT1A1 LTR MaLR 3 365 0 494 89 0 111 chr2 7772683 7772773 -245483810 + MADE1 DNA Mariner 1 80 0 387 0 0 0 chr2 7773224 7773267 -245483316 + (CA)n Simple_repeat Simple_repeat 2 44 0 2275 109 0 10 chr2 7774069 7774381 -245482202 - AluSc SINE Alu 0 309 1 1386 206 104 41 chr2 7775238 7775603 -245480980 - MLT1B LTR MaLR 0 390 3 2250 111 0 0 chr2 7775692 7775989 -245480594 + AluSq SINE Alu 1 297 -16 213 237 114 70 chr2 7776409 7776523 -245480060 + L2 LINE L2 3154 3272 0 385 183 14 0 chr2 7776536 7776607 -245479976 + MLT2B1 LTR ERVL 4 75 -445 921 108 31 0 chr2 7776616 7776745 -245479838 - AluSq/x SINE Alu -179 133 1 1036 226 100 73 chr2 7776747 7777186 -245479397 + MLT2B1 LTR ERVL 70 520 0 198 264 287 0 chr2 7777317 7777404 -245479179 - MER5A DNA MER1_type -1 188 77 3254 224 44 15 chr2 7778478 7779971 -245476612 - L1ME3A LINE L1 -11 6970 5425 1565 160 39 11 chr2 7779994 7780275 -245476308 - L1P LINE L1 -2415 3731 3443 918 239 81 10 chr2 7780265 7780562 -245476021 - L1ME3A LINE L1 -4791 2168 1851 * 2266 305 36 29 chr2 7780820 7781708 -245474875 - L1ME3A LINE L1 -5635 1224 105 310 239 14 113 chr2 7781721 7781863 -245474720 + L1MC4 LINE L1 6604 6731 -1311 592 249 86 79 chr2 7781909 7782167 -245474416 - L1ME LINE L1 -407 5763 5504 27 0 0 0 chr2 7783178 7783205 -245473378 + AT_rich Low_complexity Low_complexity 1 27 0 2370 92 7 0 chr2 7783214 7783517 -245473066 + AluSp SINE Alu 2 306 -7 2175 110 0 43 chr2 7783928 7784255 -245472328 + AluSq SINE Alu 1 313 0 398 271 65 0 chr2 7784290 7784397 -245472186 - MIR SINE MIR -30 232 119 2302 110 0 0 chr2 7784996 7785305 -245471278 - AluSc SINE Alu 0 309 1 251 225 0 124 chr2 7785982 7786071 -245470512 + L2 LINE L2 2985 3062 -210 681 277 50 5 chr2 7786446 7786648 -245469935 - MIR SINE MIR -31 231 21 2279 75 0 39 chr2 7787982 7788288 -245468295 + AluY SINE Alu 1 294 -17 354 23 0 0 chr2 7788294 7788337 -245468246 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 350 363 27 14 chr2 7788714 7788860 -245467723 + MER5A DNA MER1_type 3 150 -39 1865 40 0 5 chr2 7788999 7789223 -245467360 + AluY SINE Alu 2 224 -87 272 300 217 11 chr2 7789525 7789705 -245466878 + MIR SINE MIR 46 262 0 345 304 105 21 chr2 7790554 7790745 -245465838 - MIR SINE MIR -48 214 8 267 329 110 19 chr2 7790760 7790915 -245465668 + MIR3 SINE MIR 19 187 -21 233 288 188 29 chr2 7791221 7791391 -245465192 - MIR SINE MIR -32 230 34 219 238 0 49 chr2 7792383 7792460 -245464123 + GA-rich Low_complexity Low_complexity 1 116 0 435 19 0 0 chr2 7793164 7793216 -245463367 + (TG)n Simple_repeat Simple_repeat 2 53 0 296 331 64 43 chr2 7793361 7793514 -245463069 + MER5A DNA MER1_type 18 171 -7 221 318 91 76 chr2 7793509 7793641 -245462942 - MIR3 SINE MIR -39 169 36 * 524 228 93 25 chr2 7794034 7794196 -245462387 - MER58B DNA MER1_type 0 341 169 1575 162 19 15 chr2 7794683 7794778 -245461805 + AluSx SINE Alu 40 133 -179 234 0 0 0 chr2 7794778 7794804 -245461779 + (TAA)n Simple_repeat Simple_repeat 2 27 0 1575 162 19 15 chr2 7794804 7794973 -245461610 + AluSx SINE Alu 133 305 -7 894 213 55 8 chr2 7794999 7795234 -245461349 - Zaphod DNA AcHobo -78 3953 3708 2138 172 0 18 chr2 7796012 7796355 -245460228 - MER1B DNA MER1_type 0 337 1 343 232 54 98 chr2 7796664 7796798 -245459785 - L1MC4a LINE L1 -322 5848 5719 188 388 16 16 chr2 7797477 7797598 -245458985 - L2 LINE L2 -4 3309 3189 314 292 60 64 chr2 7797657 7797890 -245458693 - L1M4 LINE L1 -3771 2375 2144 1164 228 49 62 chr2 7797921 7798311 -245458272 - MLT2C1 LTR ERVL -2 395 11 767 287 50 41 chr2 7798880 7799298 -245457285 - HAL1b LINE L1 -704 644 223 2111 115 3 3 chr2 7799303 7799608 -245456975 - AluSq SINE Alu -8 305 1 335 303 42 50 chr2 7800868 7801129 -245455454 + MER112 DNA MER1_type 2 260 0 26 50 0 0 chr2 7801322 7801362 -245455221 + AT_rich Low_complexity Low_complexity 1 40 0 265 283 120 0 chr2 7801411 7801503 -245455080 - MIR SINE MIR -85 123 21 3189 104 26 0 chr2 7801739 7802160 -245454423 - MER57B LTR ERV1 -2 432 1 360 247 0 12 chr2 7803347 7803428 -245453155 + L2 LINE L2 3234 3313 0 2896 135 29 0 chr2 7803569 7803983 -245452600 + MSTA LTR MaLR 2 427 -1 1620 107 21 4 chr2 7804120 7804354 -245452229 - AluSq SINE Alu -10 303 66 43 35 0 0 chr2 7804741 7804798 -245451785 + AT_rich Low_complexity Low_complexity 1 57 0 478 282 139 49 chr2 7804870 7805510 -245451073 - L2 LINE L2 -16 3297 2593 324 70 0 0 chr2 7805528 7805571 -245451012 + (CA)n Simple_repeat Simple_repeat 2 44 0 1097 177 65 140 chr2 7806664 7807049 -245449534 - MLT1B LTR MaLR 0 390 35 2558 94 6 17 chr2 7807050 7807410 -245449173 + L1PB1 LINE L1 5796 6151 0 25 0 0 0 chr2 7807894 7807919 -245448664 + AT_rich Low_complexity Low_complexity 1 25 0 269 298 128 0 chr2 7807983 7808077 -245448506 - L2 LINE L2 -2 3270 3165 2043 141 3 10 chr2 7808239 7808551 -245448032 - AluJb SINE Alu -2 310 1 222 333 39 0 chr2 7809019 7809097 -245447486 + L2 LINE L2 2878 2958 -355 239 308 31 0 chr2 7809267 7809332 -245447251 + L2 LINE L2 3246 3312 -1 449 264 71 65 chr2 7809442 7809824 -245446759 + L1 LINE L1 2648 3031 -3115 335 259 75 91 chr2 7809853 7810402 -245446181 + L1 LINE L1 3256 3789 -2357 2130 128 0 0 chr2 7810402 7810698 -245445885 + AluSg SINE Alu 1 296 -14 335 259 75 91 chr2 7810698 7810887 -245445696 + L1 LINE L1 3789 3979 -2167 228 265 59 0 chr2 7812353 7812421 -245444162 + MIR SINE MIR 106 177 -85 213 318 15 0 chr2 7812721 7812787 -245443796 + L2 LINE L2 3201 3267 -5 1571 161 63 100 chr2 7814104 7814483 -245442100 + MLT1A1 LTR MaLR 1 365 0 309 308 83 6 chr2 7815329 7815498 -245441085 - MIR SINE MIR -11 251 70 960 246 107 49 chr2 7815645 7816076 -245440507 - MLT1C LTR MaLR -3 464 9 22 0 0 0 chr2 7816400 7816422 -245440161 + AT_rich Low_complexity Low_complexity 1 22 0 1093 258 77 67 chr2 7818146 7818582 -245438001 - L1ME2 LINE L1 -208 5956 5504 2039 143 0 10 chr2 7818582 7818889 -245437694 + AluSx SINE Alu 1 304 -8 1093 258 77 67 chr2 7818889 7819133 -245437450 - L1ME2 LINE L1 -660 5504 5264 947 345 112 31 chr2 7819136 7820224 -245436359 + L2 LINE L2 2100 3272 0 206 62 31 0 chr2 7820556 7820588 -245435995 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 1836 190 11 17 chr2 7822953 7823311 -245433272 + MLT1A2 LTR MaLR 8 363 -11 216 304 88 35 chr2 7823381 7823552 -245433031 + MER5A DNA MER1_type 4 183 -6 530 283 98 50 chr2 7823693 7823990 -245432593 - MER110 LTR ERV1 -14 477 167 483 250 70 0 chr2 7824073 7824229 -245432354 - MER110A LTR ERV1 -298 170 4 1410 169 51 42 chr2 7824669 7825070 -245431513 - MSTB2 LTR MaLR -2 455 1 225 0 0 0 chr2 7825787 7825812 -245430771 + (T)n Simple_repeat Simple_repeat 1 25 0 281 297 110 35 chr2 7826885 7826934 -245429649 - MIR SINE MIR -59 203 159 1436 231 136 62 chr2 7826934 7827391 -245429192 + MLT2B1 LTR ERVL 1 497 -23 216 0 0 0 chr2 7827391 7827415 -245429168 + (TG)n Simple_repeat Simple_repeat 2 25 0 1436 231 136 62 chr2 7827415 7827441 -245429142 + MLT2B1 LTR ERVL 497 520 0 281 297 110 35 chr2 7827441 7827536 -245429047 - MIR SINE MIR -103 159 48 207 0 0 0 chr2 7828646 7828669 -245427914 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 207 100 0 0 chr2 7829287 7829317 -245427266 + (A)n Simple_repeat Simple_repeat 1 30 0 349 259 123 24 chr2 7829385 7829555 -245427028 + L1ME LINE L1 5416 5602 -562 2276 78 0 0 chr2 7829588 7829903 -245426680 - AluY SINE Alu 0 315 1 275 239 245 15 chr2 7829950 7830307 -245426276 - MLT1J2 LTR MaLR -4 442 1 3347 104 57 62 chr2 7830519 7831049 -245425534 - MER1A DNA MER1_type 0 527 1 1028 126 0 48 chr2 7831284 7831451 -245425132 - L1PA11 LINE L1 -1 6173 6015 3051 54 3 0 chr2 7831452 7831825 -245424758 + L1PA10 LINE L1 5484 5857 -311 717 251 39 11 chr2 7831976 7832155 -245424428 - MER5A DNA MER1_type -2 187 4 1041 229 4 25 chr2 7832203 7832448 -245424135 - MER63B DNA MER1_type -196 240 1 296 130 74 0 chr2 7833067 7833121 -245423462 + MIR SINE MIR 118 175 -87 355 263 95 37 chr2 7834140 7834330 -245422253 - MIR SINE MIR -42 220 20 792 249 9 33 chr2 7834634 7834847 -245421736 + L1ME1 LINE L1 5954 6161 -5 445 304 73 22 chr2 7834928 7835244 -245421339 - LTR33 LTR ERVL 0 521 190 275 309 120 6 chr2 7835453 7835628 -245420955 - LTR33 LTR ERVL -324 197 3 789 346 26 17 chr2 7836008 7836352 -245420231 + L2 LINE L2 2457 2803 -511 744 178 0 22 chr2 7836353 7836488 -245420095 - FLAM_A SINE Alu -5 137 6 615 236 27 0 chr2 7836549 7836727 -245419856 + L2 LINE L2 2828 3022 -291 348 24 0 0 chr2 7836954 7836995 -245419588 + (TG)n Simple_repeat Simple_repeat 2 42 0 796 189 18 6 chr2 7839432 7839596 -245416987 - LTR64 LTR ERVK -392 166 1 427 312 83 46 chr2 7840694 7841149 -245415434 - L1M4 LINE L1 -2875 3271 2800 823 232 32 48 chr2 7841274 7841524 -245415059 - MLT1E1 LTR MaLR -2 652 407 929 231 46 42 chr2 7841578 7841838 -245414745 - MLT1E1 LTR MaLR -389 265 5 350 223 36 45 chr2 7843167 7843500 -245413083 + L1MDa LINE L1 1125 1484 -5108 491 270 83 78 chr2 7843508 7843856 -245412727 + L1MDa LINE L1 1521 1922 -4777 2634 36 7 0 chr2 7843856 7844157 -245412426 + AluY SINE Alu 1 303 -8 491 270 83 78 chr2 7844157 7844377 -245412206 + L1MDa LINE L1 1922 2139 -4560 1856 270 116 41 chr2 7844410 7844741 -245411842 + L1M4 LINE L1 3587 3892 -2254 954 92 13 7 chr2 7844741 7844894 -245411689 + (GAAA)n Simple_repeat Simple_repeat 4 157 0 1856 270 116 41 chr2 7844894 7846060 -245410523 + L1M4 LINE L1 3892 5195 -951 374 328 47 0 chr2 7847112 7847281 -245409302 + MIR SINE MIR 25 200 -62 765 226 140 82 chr2 7847579 7848016 -245408567 + LTR37B LTR ERV1 7 468 0 2629 52 0 0 chr2 7848192 7848497 -245408086 - AluY SINE Alu -6 305 1 413 291 127 0 chr2 7849997 7850162 -245406421 + MIR SINE MIR 67 252 -10 298 285 176 57 chr2 7851821 7851923 -245404660 - L2 LINE L2 -73 3240 3152 2160 110 0 10 chr2 7851923 7852222 -245404361 + AluSg SINE Alu 9 304 -6 298 285 176 57 chr2 7852222 7852488 -245404095 - L2 LINE L2 -161 3152 2828 1045 293 140 55 chr2 7852622 7853002 -245403581 - L2 LINE L2 -710 2604 2258 1203 149 23 28 chr2 7853002 7853216 -245403367 + L1MC1 LINE L1 6121 6333 0 1045 293 140 55 chr2 7853216 7853586 -245402997 - L2 LINE L2 -1056 2258 1790 309 289 114 0 chr2 7853758 7853872 -245402711 - L2 LINE L2 -723 2591 2465 223 291 0 0 chr2 7853873 7853928 -245402655 - L2 LINE L2 -1529 1785 1731 1415 153 0 0 chr2 7853933 7854155 -245402428 + AluJo SINE Alu 91 312 0 290 274 189 11 chr2 7854164 7854339 -245402244 - L2 LINE L2 -1638 1676 1471 234 219 0 0 chr2 7854385 7854449 -245402134 + (TGGA)n Simple_repeat Simple_repeat 3 66 0 230 335 134 12 chr2 7855172 7855336 -245401247 + MIR SINE MIR 54 237 -25 1677 87 55 0 chr2 7855337 7855555 -245401028 - MER30 DNA MER1_type 0 230 1 420 274 126 49 chr2 7855990 7856315 -245400268 + LTR52 LTR ERVL 2 351 -70 180 0 0 0 chr2 7856427 7856447 -245400136 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 193 365 56 9 chr2 7856687 7856794 -245399789 + L2 LINE L2 3167 3278 -35 198 71 0 0 chr2 7856868 7856896 -245399687 + (TG)n Simple_repeat Simple_repeat 1 28 0 261 0 0 0 chr2 7856950 7856979 -245399604 + (CA)n Simple_repeat Simple_repeat 2 30 0 326 286 0 0 chr2 7857145 7857222 -245399361 + MIR SINE MIR 71 147 -115 496 327 112 11 chr2 7857512 7857781 -245398802 + MLT2F LTR ERVL 269 564 -99 597 276 164 15 chr2 7858340 7858670 -245397913 + MLT2F LTR ERVL 24 402 -261 261 0 0 0 chr2 7859712 7859741 -245396842 + (TG)n Simple_repeat Simple_repeat 2 30 0 692 276 107 31 chr2 7860193 7860502 -245396081 + MLT1C LTR MaLR 3 344 -123 263 293 0 27 chr2 7860502 7860577 -245396006 - L2 LINE L2 -36 3277 3205 207 0 0 0 chr2 7860682 7860705 -245395878 + (TA)n Simple_repeat Simple_repeat 1 23 0 3773 49 0 7 chr2 7861727 7862178 -245394405 - LTR7 LTR ERV1 -2 448 1 2676 75 45 0 chr2 7862178 7862553 -245394030 - HERVH LTR ERV1 0 7713 7322 1337 142 18 9 chr2 7862551 7862769 -245393814 - HERVH LTR ERV1 -1894 5819 5600 * 4134 142 31 2 chr2 7862770 7863413 -245393170 - HERVH LTR ERV1 -2564 5149 4488 3136 125 37 6 chr2 7863415 7863902 -245392681 - HERVH LTR ERV1 -3720 3993 3492 977 120 7 0 chr2 7863892 7864042 -245392541 - HERVH LTR ERV1 -4423 3290 3140 * 16955 101 20 19 chr2 7864036 7866582 -245390001 - HERVH LTR ERV1 -4726 2987 437 991 85 42 78 chr2 7866583 7866838 -245389745 - HERVH LTR ERV1 -7093 620 437 4478 89 5 6 chr2 7866839 7867460 -245389123 - HERVH LTR ERV1 -7093 620 1 3663 55 4 11 chr2 7867462 7867913 -245388670 - LTR7 LTR ERV1 -2 448 1 493 296 90 48 chr2 7868056 7868480 -245388103 + LTR16A LTR ERVL 1 442 -8 267 307 59 52 chr2 7868678 7868831 -245387752 + L2 LINE L2 3160 3313 0 231 253 69 35 chr2 7869611 7869698 -245386885 + MER5A DNA MER1_type 97 186 -3 266 248 90 60 chr2 7871432 7871565 -245385018 + L2 LINE L2 3136 3272 0 213 330 98 0 chr2 7872006 7872118 -245384465 + L3b LINE CR1 1121 1243 -340 506 280 78 56 chr2 7872123 7872226 -245384357 - MIR SINE MIR 0 262 163 1704 197 7 102 chr2 7872226 7872657 -245383926 + MLT1B LTR MaLR 1 390 0 506 280 78 56 chr2 7872657 7872785 -245383798 - MIR SINE MIR -99 163 26 2084 143 74 34 chr2 7872840 7873190 -245383393 + THE1B LTR MaLR 1 364 0 294 235 78 86 chr2 7873788 7874031 -245382552 - L1MC4 LINE L1 -878 7164 6924 468 293 8 0 chr2 7874063 7874196 -245382387 - MER58A DNA MER1_type -44 180 47 423 0 0 0 chr2 7874781 7874828 -245381755 + (TG)n Simple_repeat Simple_repeat 2 48 0 371 356 58 5 chr2 7874902 7875093 -245381490 + MIR SINE MIR 21 221 -41 194 289 44 104 chr2 7875217 7875352 -245381231 - MIR SINE MIR -113 149 23 226 261 171 0 chr2 7875933 7876021 -245380562 + L2 LINE L2 3169 3271 -1 488 43 159 0 chr2 7877435 7877504 -245379079 - MADE1 DNA Mariner 0 80 1 536 220 184 54 chr2 7877699 7878011 -245378572 - MLT1J2 LTR MaLR -10 440 44 377 290 48 0 chr2 7879187 7879311 -245377272 + MER94 DNA DNA 5 134 0 22 0 0 0 chr2 7879711 7879733 -245376850 + AT_rich Low_complexity Low_complexity 1 22 0 233 268 87 22 chr2 7879761 7879944 -245376639 - L1M4 LINE L1 -1006 5140 4946 337 315 124 19 chr2 7880024 7880291 -245376292 - L1M4 LINE L1 -1323 4823 4529 1223 277 36 6 chr2 7880293 7880625 -245375958 + L1M4 LINE L1 1 342 -6200 298 175 186 21 chr2 7880617 7880714 -245375869 + L1M4 LINE L1 1745 1857 -4789 * 483 298 71 60 chr2 7881068 7881631 -245374952 - L1M4 LINE L1 -1922 4224 3656 281 214 0 11 chr2 7881806 7881895 -245374688 + (TA)n Simple_repeat Simple_repeat 1 88 0 389 304 56 60 chr2 7882294 7882329 -245374254 - L1MEd LINE L1 -4949 1170 1136 1955 153 0 10 chr2 7882329 7882636 -245373947 - AluSx SINE Alu -8 304 1 389 304 56 60 chr2 7882636 7882866 -245373717 - L1MEd LINE L1 -4983 1136 906 204 273 0 0 chr2 7882907 7882951 -245373632 + (TA)n Simple_repeat Simple_repeat 2 45 0 3560 139 59 13 chr2 7882951 7883227 -245373356 + MER39B LTR ERV1 3 265 -388 2067 134 80 14 chr2 7883227 7883578 -245373005 + THE1C LTR MaLR 1 374 -1 3560 139 59 13 chr2 7883578 7883896 -245372687 + MER39B LTR ERV1 265 624 -29 2178 73 6 94 chr2 7885809 7886137 -245370446 + AluSx SINE Alu 1 299 -13 187 367 46 0 chr2 7886234 7886343 -245370240 - MIR SINE MIR -32 230 117 468 212 22 4 chr2 7886904 7887140 -245369443 + GA-rich Low_complexity Low_complexity 1 240 0 1851 161 33 3 chr2 7887744 7887869 -245368714 + AluSx SINE Alu 2 122 -190 212 0 36 0 chr2 7887869 7887897 -245368686 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 1851 161 33 3 chr2 7887897 7888070 -245368513 + AluSx SINE Alu 122 309 -3 220 213 43 0 chr2 7889006 7889053 -245367530 - MIR SINE MIR -132 130 82 191 283 22 0 chr2 7889538 7889584 -245366999 - MIR3 SINE MIR -16 192 146 1605 248 102 40 chr2 7889996 7891182 -245365401 + L1ME3A LINE L1 4884 6166 -4 204 40 0 0 chr2 7893835 7893860 -245362723 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 250 245 60 73 chr2 7894823 7894988 -245361595 - MIR3 SINE MIR -11 197 36 288 0 0 0 chr2 7895504 7895536 -245361047 + (T)n Simple_repeat Simple_repeat 1 32 0 470 364 65 14 chr2 7895629 7895846 -245360737 - MIR SINE MIR -15 247 20 352 376 129 0 chr2 7896683 7896893 -245359690 + L2 LINE L2 2488 2724 -590 876 305 57 55 chr2 7897062 7897715 -245358868 + L1MC4a LINE L1 5254 5907 -1901 292 149 15 15 chr2 7897723 7897790 -245358793 + (TA)n Simple_repeat Simple_repeat 1 67 0 306 132 0 0 chr2 7897942 7897995 -245358588 + (TG)n Simple_repeat Simple_repeat 2 54 0 264 326 76 5 chr2 7898006 7898190 -245358393 - L2 LINE L2 -1506 1808 1612 2290 116 129 13 chr2 7898472 7898851 -245357732 - MSTA LTR MaLR -5 423 1 260 239 0 0 chr2 7898939 7899006 -245357577 - HERV16 LTR ERVL -83 4913 4847 360 192 27 0 chr2 7899425 7899498 -245357085 - LTR16B LTR ERVL -389 75 1 4840 221 32 7 chr2 7899641 7900655 -245355928 + MER45B DNA AcHobo 1 1040 0 1967 194 22 8 chr2 7901204 7901564 -245355019 - MLT1A1 LTR MaLR 0 365 1 2317 73 0 0 chr2 7902081 7902421 -245354162 + AluY SINE Alu 1 311 0 2214 139 0 0 chr2 7903933 7904243 -245352340 - AluSx SINE Alu -2 310 1 197 206 48 48 chr2 7904634 7904697 -245351886 + L2 LINE L2 3158 3220 -93 277 301 48 19 chr2 7904797 7904900 -245351683 + L2 LINE L2 3155 3260 -12 609 330 33 0 chr2 7905873 7906088 -245350495 + MIR SINE MIR 20 241 -21 181 337 42 60 chr2 7906167 7906333 -245350250 + MIR3 SINE MIR 37 199 -9 215 59 0 29 chr2 7906650 7906684 -245349899 + (GGGAGA)n Simple_repeat Simple_repeat 4 36 0 1912 208 45 75 chr2 7906744 7907301 -245349282 - MLT1F LTR MaLR -2 540 1 290 269 41 69 chr2 7907379 7907524 -245349059 - L2 LINE L2 -853 2461 2321 1379 316 80 47 chr2 7907782 7908266 -245348317 + L2 LINE L2 2209 2676 -637 2216 90 37 7 chr2 7908266 7908566 -245348017 - AluSg SINE Alu -1 309 1 1379 316 80 47 chr2 7908566 7909144 -245347439 + L2 LINE L2 2676 3313 0 245 252 25 109 chr2 7909481 7909600 -245346983 + L2 LINE L2 3190 3298 -15 319 295 38 0 chr2 7909760 7909865 -245346718 + L1P LINE L1 3656 3764 -2382 203 243 0 0 chr2 7909866 7909903 -245346680 + (CA)n Simple_repeat Simple_repeat 2 38 0 225 236 34 22 chr2 7909910 7909999 -245346584 + L1MC4 LINE L1 6616 6705 -1337 * 237 165 94 47 chr2 7909978 7910063 -245346520 - L1MC4 LINE L1 -1340 6702 6614 380 184 23 0 chr2 7910067 7910154 -245346429 + (CATATA)n Simple_repeat Simple_repeat 6 94 0 761 244 27 44 chr2 7910240 7910528 -245346055 + L1M4 LINE L1 4079 4360 -1786 2878 215 108 82 chr2 7910768 7911279 -245345304 + L1MC3 LINE L1 6593 7089 -696 381 243 0 0 chr2 7911279 7911353 -245345230 + MLT1F1 LTR MaLR 50 123 -444 2878 215 108 82 chr2 7911353 7911916 -245344667 + L1MC3 LINE L1 7089 7770 -15 2035 198 8 6 chr2 7911961 7912325 -245344258 - MLT1A1 LTR MaLR 0 365 1 431 322 63 51 chr2 7912338 7912973 -245343610 + L1MB3 LINE L1 3512 4154 -1992 685 207 95 12 chr2 7913001 7913170 -245343413 + MER5A DNA MER1_type 1 183 -6 361 252 92 30 chr2 7913176 7913307 -245343276 + LTR16A1 LTR ERVL 1 139 -318 843 184 13 0 chr2 7913345 7913497 -245343086 + MER2 DNA MER2_type 17 170 -175 * 965 211 48 55 chr2 7913495 7913784 -245342799 + LTR16A1 LTR ERVL 171 457 0 500 295 49 11 chr2 7913874 7914057 -245342526 - MIR SINE MIR -1 261 72 23 68 0 0 chr2 7914133 7914177 -245342406 + AT_rich Low_complexity Low_complexity 1 44 0 344 279 38 100 chr2 7914550 7914890 -245341693 + MLT1I LTR MaLR 91 409 0 996 234 114 32 chr2 7915017 7915333 -245341250 + MER2 DNA MER2_type 2 343 -2 335 291 57 60 chr2 7915346 7915546 -245341037 + L1MB3 LINE L1 5039 5239 -907 216 111 0 0 chr2 7915546 7915582 -245341001 + (CA)n Simple_repeat Simple_repeat 1 36 0 335 291 57 60 chr2 7915582 7915714 -245340869 + L1MB3 LINE L1 5239 5370 -776 557 282 87 17 chr2 7915884 7916179 -245340404 + L1ME4a LINE L1 5613 5883 -238 428 295 77 22 chr2 7917163 7917346 -245339237 - MIR SINE MIR -58 204 12 186 43 0 0 chr2 7917571 7917594 -245338989 + (TG)n Simple_repeat Simple_repeat 1 23 0 1982 104 33 0 chr2 7917857 7918152 -245338431 + AluSg SINE Alu 1 304 0 239 256 35 47 chr2 7920643 7920729 -245335854 + MIR SINE MIR 137 221 -41 2629 132 5 3 chr2 7920826 7921198 -245335385 + THE1C LTR MaLR 1 373 -2 3500 171 53 0 chr2 7921301 7921927 -245334656 + L1MB3 LINE L1 5523 6181 -2 294 293 0 12 chr2 7922778 7922860 -245333723 + MIR SINE MIR 2 82 -180 2868 152 26 4 chr2 7924043 7924498 -245332085 - L1PA15 LINE L1 0 6165 5701 23 0 0 0 chr2 7926164 7926187 -245330396 + AT_rich Low_complexity Low_complexity 1 23 0 1230 89 157 0 chr2 7926818 7926969 -245329614 + MLT2A1 LTR ERVL 224 412 -32 806 30 10 0 chr2 7926969 7927070 -245329513 + (TCTA)n Simple_repeat Simple_repeat 3 104 0 1230 89 157 0 chr2 7927070 7927109 -245329474 + MLT2A1 LTR ERVL 412 444 0 279 0 0 0 chr2 7927581 7927612 -245328971 + (CAT)n Simple_repeat Simple_repeat 3 33 0 813 290 97 37 chr2 7927645 7928100 -245328483 - MLT1L LTR MaLR -46 569 88 475 204 350 19 chr2 7928544 7928657 -245327926 - MER63A DNA MER1_type -1479 209 135 396 0 0 0 chr2 7928657 7928701 -245327882 + (CA)n Simple_repeat Simple_repeat 2 45 0 475 204 350 19 chr2 7928701 7928744 -245327839 - MER63A DNA MER1_type -1553 135 1 217 368 135 11 chr2 7928937 7929122 -245327461 - L2 LINE L2 -235 3037 2830 1583 212 41 13 chr2 7929278 7929811 -245326772 + MER92B LTR ERV1 15 636 0 368 123 0 15 chr2 7930604 7930669 -245325914 + (TTCC)n Simple_repeat Simple_repeat 3 66 0 412 142 115 108 chr2 7931000 7931148 -245325435 + MER53 DNA DNA 1 149 -40 267 31 0 0 chr2 7931504 7931536 -245325047 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 180 152 0 0 chr2 7933730 7933763 -245322820 + GA-rich Low_complexity Low_complexity 1 33 0 513 323 90 32 chr2 7934738 7935082 -245321501 - L2 LINE L2 -44 3269 2906 202 373 19 25 chr2 7936730 7936891 -245319692 + MIR SINE MIR 31 190 -72 294 314 48 40 chr2 7937946 7938070 -245318513 + MIR SINE MIR 20 144 -118 282 325 46 35 chr2 7938624 7938821 -245317762 - L2 LINE L2 -653 2661 2463 968 236 74 0 chr2 7940628 7940870 -245315713 + MIR SINE MIR 1 260 -2 215 266 38 13 chr2 7943475 7943554 -245313029 + MIR SINE MIR 111 191 -71 537 164 116 156 chr2 7945046 7945220 -245311363 + MER20 DNA MER1_type 1 166 -53 285 98 0 0 chr2 7945220 7945261 -245311322 + (CA)n Simple_repeat Simple_repeat 1 41 0 537 164 116 156 chr2 7945261 7945311 -245311272 + MER20 DNA MER1_type 166 216 -3 282 358 5 27 chr2 7945324 7945511 -245311072 + MIR SINE MIR 46 228 -34 203 241 37 0 chr2 7945508 7945562 -245311021 + L2 LINE L2 3211 3266 -6 * 449 205 49 25 chr2 7946341 7946463 -245310120 + L1ME4a LINE L1 5997 6121 0 284 289 31 21 chr2 7946910 7947007 -245309576 + MIR SINE MIR 44 141 -67 2208 114 0 22 chr2 7949518 7949835 -245306748 + AluSg SINE Alu 1 310 0 199 380 53 9 chr2 7950731 7950844 -245305739 + MIR SINE MIR 36 153 -109 21 0 0 0 chr2 7951971 7951992 -245304591 + AT_rich Low_complexity Low_complexity 1 21 0 2201 135 112 0 chr2 7952590 7952975 -245303608 - MSTA LTR MaLR 0 428 1 213 302 0 0 chr2 7953095 7953148 -245303435 - MIR SINE MIR -163 99 47 218 220 9 147 chr2 7954480 7954540 -245302043 + MER5A DNA MER1_type 16 56 -133 2134 133 0 0 chr2 7954540 7954848 -245301735 + AluSx SINE Alu 3 310 -2 218 220 9 147 chr2 7954848 7954896 -245301687 + MER5A DNA MER1_type 56 109 -80 619 185 106 7 chr2 7954903 7955054 -245301529 - MER5B DNA MER1_type -12 166 1 327 265 68 0 chr2 7955208 7955340 -245301243 + MIR SINE MIR 60 200 -62 1594 158 105 31 chr2 7956700 7957023 -245299560 + MER7A DNA MER2_type 2 346 0 501 271 52 35 chr2 7957484 7957713 -245298870 - LTR67 LTR ERVL 0 557 325 280 379 26 13 chr2 7958309 7958462 -245298121 - MIR3 SINE MIR -38 170 16 748 212 67 56 chr2 7960378 7960705 -245295878 - LTR37B LTR ERV1 -7 461 91 22 0 0 0 chr2 7961295 7961317 -245295266 + AT_rich Low_complexity Low_complexity 1 22 0 1893 110 77 44 chr2 7961367 7961730 -245294853 + THE1C LTR MaLR 1 375 0 261 83 0 0 chr2 7963462 7963498 -245293085 + (CA)n Simple_repeat Simple_repeat 1 36 0 198 340 21 11 chr2 7964467 7964561 -245292022 + MIR SINE MIR 60 154 -108 1104 238 79 0 chr2 7966231 7966496 -245290087 - MER58B DNA MER1_type 0 341 56 232 213 13 27 chr2 7966659 7966734 -245289849 + (TGAA)n Simple_repeat Simple_repeat 1 74 0 208 341 145 15 chr2 7968234 7968432 -245288151 + MIR3 SINE MIR 21 241 -21 1201 118 82 282 chr2 7968432 7968967 -245287616 - MSTA LTR MaLR 0 428 1 4172 146 50 21 chr2 7969155 7969918 -245286665 + LTR1 LTR ERV1 1 785 0 247 361 62 0 chr2 7970620 7970750 -245285833 - MIR SINE MIR -105 157 20 3528 176 30 11 chr2 7970751 7971505 -245285078 + L1MA9 LINE L1 4242 5010 -1136 5163 190 18 9 chr2 7971745 7972519 -245284064 + L1MA9 LINE L1 5002 5768 -544 222 37 0 0 chr2 7972519 7972546 -245284037 + (CA)n Simple_repeat Simple_repeat 2 28 0 5163 190 18 9 chr2 7972546 7972809 -245283774 + L1MA9 LINE L1 5768 6027 -285 1480 196 28 39 chr2 7972809 7973145 -245283438 + AluJo SINE Alu 1 333 0 5163 190 18 9 chr2 7973145 7973405 -245283178 + L1MA9 LINE L1 6027 6311 -1 204 325 165 21 chr2 7974001 7974389 -245282194 + L2 LINE L2 2454 2897 -417 254 265 29 0 chr2 7974389 7974457 -245282126 + CT-rich Low_complexity Low_complexity 2 71 0 190 357 56 32 chr2 7974488 7974737 -245281846 + L2 LINE L2 2945 3199 -73 315 294 43 37 chr2 7974927 7975090 -245281493 + MIR SINE MIR 35 198 -64 1673 190 73 38 chr2 7975440 7975819 -245280764 - MLT1C LTR MaLR 0 467 72 1320 219 76 28 chr2 7975819 7976176 -245280407 + MLT1A2 LTR MaLR 1 374 0 1673 190 73 38 chr2 7976176 7976191 -245280392 - MLT1C LTR MaLR -395 72 59 3575 70 4 7 chr2 7976198 7976652 -245279931 + MLT2A2 LTR ERVL 1 453 0 192 296 0 0 chr2 7977717 7977771 -245278812 - L2 LINE L2 0 3272 3219 365 265 11 99 chr2 7977838 7978019 -245278564 + MIR SINE MIR 62 226 -36 290 68 0 23 chr2 7978122 7978166 -245278417 - MADE1 DNA Mariner -37 43 1 198 0 0 0 chr2 7978670 7978692 -245277891 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 232 326 32 0 chr2 7979428 7979523 -245277060 + MIR SINE MIR 43 140 -68 221 281 37 49 chr2 7981640 7981722 -245274861 - L2 LINE L2 0 3272 3192 505 299 23 37 chr2 7982389 7982632 -245273951 + MIR SINE MIR 18 253 -9 1214 254 100 33 chr2 7982887 7983353 -245273230 - MER21B LTR ERV1 -97 834 294 374 212 0 0 chr2 7983426 7983492 -245273091 - MER21B LTR ERV1 -785 78 13 277 284 110 19 chr2 7985775 7985930 -245270653 - MLT1L LTR MaLR -10 605 437 457 314 53 16 chr2 7986305 7986493 -245270090 - MIR SINE MIR -22 240 46 2506 57 3 0 chr2 7986885 7987183 -245269400 + AluY SINE Alu 1 299 -12 180 289 113 10 chr2 7987474 7987571 -245269012 + MIR SINE MIR 106 212 -50 212 316 54 65 chr2 7988279 7988447 -245268136 + MIR3 SINE MIR 16 181 -27 1177 42 0 0 chr2 7988448 7988590 -245267993 + L1PA5 LINE L1 6013 6154 0 318 282 0 0 chr2 7989209 7989351 -245267232 + (CA)n Simple_repeat Simple_repeat 2 143 0 362 282 30 39 chr2 7990213 7990372 -245266211 - MIR SINE MIR -63 145 23 1407 212 43 54 chr2 7990707 7990875 -245265708 + MLT1A2 LTR MaLR 1 169 -205 2156 125 7 0 chr2 7990875 7991179 -245265404 + AluSq SINE Alu 1 306 -7 1407 212 43 54 chr2 7991179 7991382 -245265201 + MLT1A2 LTR MaLR 169 368 -6 275 247 26 39 chr2 7991516 7991593 -245264990 - MER58B DNA MER1_type 0 341 266 190 308 125 27 chr2 7992229 7992424 -245264159 - MIR SINE MIR -6 256 46 213 132 0 0 chr2 7992994 7993032 -245263551 + (CA)n Simple_repeat Simple_repeat 2 39 0 243 300 273 7 chr2 7993913 7994063 -245262520 - MIR SINE MIR -41 221 32 1309 166 12 104 chr2 7994169 7994351 -245262232 - AluJo SINE Alu -2 310 113 243 0 0 0 chr2 7994351 7994378 -245262205 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2692 16 0 0 chr2 7994380 7994686 -245261897 - AluYb8 SINE Alu -12 306 1 1309 166 12 104 chr2 7994686 7994837 -245261746 - AluJo SINE Alu -200 112 5 37 62 0 0 chr2 7995186 7995251 -245261332 + AT_rich Low_complexity Low_complexity 1 65 0 320 230 0 10 chr2 7995552 7995652 -245260931 + CT-rich Low_complexity Low_complexity 2 100 0 1495 217 40 40 chr2 7995905 7996279 -245260304 + MLT1A2 LTR MaLR 1 374 0 696 342 44 44 chr2 7996345 7996781 -245259802 + L2 LINE L2 2836 3271 -1 759 244 72 29 chr2 7996812 7997343 -245259240 - MLT1E1 LTR MaLR -2 652 1 334 353 30 18 chr2 7997428 7997595 -245258988 + MIR SINE MIR 65 233 -29 183 42 0 0 chr2 7997794 7997818 -245258765 + (A)n Simple_repeat Simple_repeat 1 24 0 1052 248 9 0 chr2 7999192 7999414 -245257169 - MLT1A1 LTR MaLR 0 365 142 1230 203 130 20 chr2 8000217 8000562 -245256021 - MLT1B LTR MaLR -4 386 4 333 321 125 22 chr2 8001179 8001403 -245255180 + LTR16A LTR ERVL 115 361 -89 952 330 54 39 chr2 8002291 8002863 -245253720 + HERV16 LTR ERVL 991 1571 -3425 1028 291 44 47 chr2 8003052 8003901 -245252682 + L1M4 LINE L1 2131 2976 -3170 1171 89 0 56 chr2 8003936 8004094 -245252489 - L1PB1 LINE L1 -207 5944 5796 207 0 0 0 chr2 8004094 8004117 -245252466 + (CA)n Simple_repeat Simple_repeat 2 24 0 1171 89 0 56 chr2 8004117 8004137 -245252446 - L1PB1 LINE L1 -355 5796 5776 393 107 47 33 chr2 8004150 8004300 -245252283 + (TA)n Simple_repeat Simple_repeat 1 152 0 253 57 23 68 chr2 8004335 8004423 -245252160 + (TA)n Simple_repeat Simple_repeat 2 85 0 2047 88 35 0 chr2 8004427 8004712 -245251871 - L1PB1 LINE L1 -360 5791 5497 380 349 50 43 chr2 8004785 8005043 -245251540 + L2 LINE L2 3005 3264 -8 412 274 11 86 chr2 8005665 8005840 -245250743 - MIR3 SINE MIR -27 181 20 204 40 0 0 chr2 8006418 8006443 -245250140 + (TGGA)n Simple_repeat Simple_repeat 2 26 0 278 358 50 11 chr2 8007509 8007688 -245248895 + MIR3 SINE MIR 14 199 -9 510 203 0 0 chr2 8008573 8008691 -245247892 + (TG)n Simple_repeat Simple_repeat 1 118 0 548 302 131 34 chr2 8009842 8010110 -245246473 - MER115 DNA AcHobo -398 295 2 228 182 0 0 chr2 8011500 8011544 -245245039 + MIR SINE MIR 84 127 -135 2266 114 76 15 chr2 8011986 8012329 -245244254 + THE1B LTR MaLR 1 364 0 258 95 0 0 chr2 8012750 8012792 -245243791 + (TG)n Simple_repeat Simple_repeat 2 43 0 235 316 68 34 chr2 8013859 8014036 -245242547 - MIR SINE MIR -77 185 3 466 257 56 78 chr2 8016299 8016767 -245239816 + MLT1F1 LTR MaLR 17 537 -5 231 317 39 65 chr2 8018781 8018955 -245237628 + MIR SINE MIR 5 171 -62 184 293 35 0 chr2 8019617 8019675 -245236908 - L2 LINE L2 -18 3254 3195 672 295 78 4 chr2 8020437 8020681 -245235902 - MLT1C LTR MaLR -2 465 204 1398 141 90 31 chr2 8021169 8021274 -245235309 + AluSp SINE Alu 10 107 -206 2145 88 3 26 chr2 8021274 8021579 -245235004 + AluY SINE Alu 1 298 -13 1398 141 90 31 chr2 8021579 8021729 -245234854 + AluSp SINE Alu 107 280 -33 22 0 0 0 chr2 8021749 8021771 -245234812 + AT_rich Low_complexity Low_complexity 1 22 0 410 318 218 45 chr2 8022081 8022594 -245233989 + L1MC4a LINE L1 5255 5856 -1952 557 365 44 6 chr2 8022619 8022940 -245233643 - MLT1J1 LTR MaLR -43 403 71 396 141 125 0 chr2 8023517 8023581 -245233002 - FRAM/FAM SINE Alu -95 71 1 509 225 73 22 chr2 8024045 8024189 -245232394 - MLT1J2 LTR MaLR -289 161 18 200 173 39 58 chr2 8024312 8024364 -245232219 + GA-rich Low_complexity Low_complexity 4 54 0 248 130 22 0 chr2 8024693 8024739 -245231844 + (TTCA)n Simple_repeat Simple_repeat 4 50 0 2411 120 40 0 chr2 8025961 8026310 -245230273 - THE1B LTR MaLR -1 363 1 251 298 28 61 chr2 8026524 8026700 -245229883 + MIR SINE MIR 34 206 -2 33 56 0 0 chr2 8026709 8026763 -245229820 + AT_rich Low_complexity Low_complexity 1 54 0 248 270 50 20 chr2 8026885 8026985 -245229598 + MIR SINE MIR 18 120 -142 226 260 30 80 chr2 8026989 8027089 -245229494 + MIR SINE MIR 89 183 -79 239 294 198 23 chr2 8029465 8029642 -245226941 - L2 LINE L2 -4 3309 3102 3698 30 0 0 chr2 8029814 8030244 -245226339 - L1PA2 LINE L1 0 6155 5726 4184 11 0 0 chr2 8030244 8030745 -245225838 + L1PA2 LINE L1 5221 5721 -434 350 161 23 35 chr2 8030974 8031061 -245225522 + L1MEc LINE L1 2232 2317 -4079 360 282 15 8 chr2 8031132 8031263 -245225320 + L1MCc LINE L1 27 158 -6265 308 294 147 49 chr2 8031364 8031629 -245224954 + L1MCc LINE L1 298 588 -5835 403 195 25 93 chr2 8031755 8031873 -245224710 + L1MCc LINE L1 818 927 -5496 1477 231 46 3 chr2 8032573 8032902 -245223681 + MLT1A1 LTR MaLR 1 343 -22 250 184 41 0 chr2 8032902 8032951 -245223632 + MLT1A1 LTR MaLR 315 365 0 190 292 22 56 chr2 8033500 8033589 -245222994 + MIR3 SINE MIR 89 174 -34 1095 332 125 29 chr2 8033592 8034909 -245221674 + L2 LINE L2 1830 3272 0 335 326 88 21 chr2 8034950 8035143 -245221440 + MIR3 SINE MIR 2 207 -1 1047 166 42 0 chr2 8035575 8035768 -245220815 + MER3 DNA MER1_type 9 209 0 2202 160 35 38 chr2 8036367 8036913 -245219670 + MLT2A2 LTR ERVL 1 551 -3 414 0 0 0 chr2 8036913 8036959 -245219624 + (CA)n Simple_repeat Simple_repeat 2 47 0 249 159 0 0 chr2 8039131 8039175 -245217408 + (TA)n Simple_repeat Simple_repeat 1 44 0 204 135 0 0 chr2 8039174 8039211 -245217372 + (CA)n Simple_repeat Simple_repeat 2 38 0 * 528 253 38 26 chr2 8039216 8039443 -245217140 - L1MD3 LINE L1 -1359 6683 6443 1131 123 0 0 chr2 8039524 8039686 -245216897 + MLT2B2 LTR ERVL 2 163 -352 1962 140 143 11 chr2 8039832 8040210 -245216373 + MSTA LTR MaLR 1 428 0 186 125 143 18 chr2 8040304 8040360 -245216223 + MER5C DNA MER1_type 237 299 -25 27 81 0 0 chr2 8040461 8040523 -245216060 + AT_rich Low_complexity Low_complexity 1 62 0 2791 194 22 2 chr2 8040995 8041505 -245215078 - MLT2B1 LTR ERVL 0 520 1 1560 243 102 49 chr2 8041601 8042189 -245214394 + L1MC4 LINE L1 6468 7086 -956 1081 280 98 22 chr2 8042320 8042727 -245213856 + L1MC4 LINE L1 7464 7901 -141 227 216 0 0 chr2 8042731 8042782 -245213801 + L1MC4 LINE L1 7990 8040 -2 2236 105 6 10 chr2 8044660 8044973 -245211610 + AluSx SINE Alu 1 312 0 4195 195 20 5 chr2 8045112 8046665 -245209918 - L1MA9 LINE L1 -14 6298 4536 287 220 0 0 chr2 8046677 8046736 -245209847 - L1MA9 LINE L1 -2494 3652 3594 1364 248 28 55 chr2 8046902 8047301 -245209282 - MLT1E LTR MaLR 0 593 206 216 111 0 0 chr2 8047330 8047366 -245209217 + (TG)n Simple_repeat Simple_repeat 2 37 0 239 213 0 0 chr2 8047366 8047413 -245209170 - MLT1E LTR MaLR -491 163 117 340 239 0 54 chr2 8047999 8048091 -245208492 + L2 LINE L2 3186 3272 0 235 291 0 0 chr2 8048757 8048812 -245207771 + CT-rich Low_complexity Low_complexity 2 56 0 382 296 113 31 chr2 8048878 8049037 -245207546 + MIR3 SINE MIR 5 176 -32 361 299 54 65 chr2 8049793 8049977 -245206606 - MIR SINE MIR -56 206 25 1569 233 55 17 chr2 8050423 8050843 -245205740 + MER63B DNA MER1_type 1 436 0 2224 273 137 30 chr2 8051590 8052587 -245203996 - HAL1 LINE L1 -7 2500 1397 197 267 0 0 chr2 8052696 8052741 -245203842 + MIR SINE MIR 107 151 -111 369 183 0 0 chr2 8052879 8052950 -245203633 - AluJ/FRAM SINE Alu 0 302 232 2410 308 67 25 chr2 8052970 8053592 -245202991 - HAL1 LINE L1 -1189 1318 724 2363 127 36 28 chr2 8053592 8053953 -245202630 - THE1B LTR MaLR 0 364 1 2410 308 67 25 chr2 8053953 8054593 -245201990 - HAL1 LINE L1 -1783 724 3 1648 200 7 0 chr2 8054845 8055155 -245201428 + AluJo SINE Alu 1 312 0 2219 104 0 20 chr2 8055214 8055513 -245201070 + AluSc SINE Alu 1 293 -16 216 0 0 0 chr2 8055607 8055631 -245200952 + (CAAAAA)n Simple_repeat Simple_repeat 3 26 0 1252 188 31 100 chr2 8056093 8056249 -245200334 + MLT1B LTR MaLR 21 186 -204 1916 133 20 20 chr2 8056249 8056550 -245200033 + AluSg SINE Alu 1 301 -9 1252 188 31 100 chr2 8056550 8056782 -245199801 + MLT1B LTR MaLR 186 382 -8 549 278 80 6 chr2 8057793 8057969 -245198614 + Charlie1 DNA MER1_type 1 189 -2572 2203 93 33 0 chr2 8058031 8058332 -245198251 + AluY SINE Alu 1 311 0 249 98 0 157 chr2 8058332 8058383 -245198200 - U6 snRNA snRNA -1 106 64 473 278 15 0 chr2 8058383 8058516 -245198067 + Charlie1 DNA MER1_type 2626 2760 -1 21 36 0 0 chr2 8059062 8059090 -245197493 + AT_rich Low_complexity Low_complexity 1 28 0 1535 184 0 21 chr2 8059204 8059487 -245197096 - AluJo SINE Alu -33 279 3 21 0 0 0 chr2 8059838 8059859 -245196724 + AT_rich Low_complexity Low_complexity 1 21 0 305 216 53 88 chr2 8060061 8060232 -245196351 + L1ME4a LINE L1 5260 5424 -2384 311 288 194 0 chr2 8060448 8060587 -245195996 + MIR SINE MIR 84 249 -13 342 0 0 0 chr2 8060604 8060642 -245195941 + (TG)n Simple_repeat Simple_repeat 1 38 0 261 0 0 0 chr2 8060641 8060670 -245195913 + (GA)n Simple_repeat Simple_repeat 1 29 0 * 1956 118 0 15 chr2 8060675 8060947 -245195636 - AluSx SINE Alu -44 268 1 228 67 0 0 chr2 8062363 8062393 -245194190 + (T)n Simple_repeat Simple_repeat 1 30 0 694 263 99 65 chr2 8063497 8064052 -245192531 + L1ME4a LINE L1 5524 6097 -24 2203 101 3 10 chr2 8064327 8064625 -245191958 + AluSx SINE Alu 1 296 -16 1741 169 3 3 chr2 8064949 8065239 -245191344 + AluJb SINE Alu 7 296 -16 2503 131 28 17 chr2 8065942 8066302 -245190281 - THE1B LTR MaLR 0 364 1 2576 47 3 31 chr2 8066417 8066735 -245189848 - AluY SINE Alu -2 309 1 626 266 7 26 chr2 8066868 8067022 -245189561 + MER45A DNA AcHobo 3 153 -25 1653 262 43 15 chr2 8068446 8069060 -245187523 - L1MD3 LINE L1 -10 7985 7258 256 50 75 0 chr2 8069067 8069107 -245187476 - L1MA1 LINE L1 0 6302 6260 314 105 88 0 chr2 8069109 8069166 -245187417 + L1MA2 LINE L1 6225 6286 -18 755 284 74 40 chr2 8069195 8069651 -245186932 - L1ME1 LINE L1 -264 5902 5407 364 298 34 58 chr2 8070354 8070562 -245186021 + MIR SINE MIR 59 261 -1 2099 66 7 42 chr2 8070594 8070880 -245185703 + AluSp SINE Alu 1 276 -37 321 339 54 0 chr2 8071066 8071196 -245185387 + L2 LINE L2 3133 3269 -3 199 269 19 0 chr2 8073042 8073094 -245183489 + L2 LINE L2 3242 3294 -19 235 349 42 12 chr2 8073131 8073297 -245183286 - MIR SINE MIR -4 258 88 297 0 0 0 chr2 8073338 8073371 -245183212 + (CA)n Simple_repeat Simple_repeat 2 34 0 2228 114 3 0 chr2 8073450 8073747 -245182836 - AluSx SINE Alu -14 298 1 182 312 101 43 chr2 8073986 8074124 -245182459 - L2 LINE L2 0 3272 3127 3755 160 13 61 chr2 8074257 8074672 -245181911 - L1MA10 LINE L1 -3 6331 5967 1846 177 0 16 chr2 8074672 8074989 -245181594 - AluJb SINE Alu 0 312 1 3755 160 13 61 chr2 8074989 8075329 -245181254 - L1MA10 LINE L1 -367 5967 5612 310 121 30 0 chr2 8075976 8076042 -245180541 + CT-rich Low_complexity Low_complexity 2 69 0 378 42 0 0 chr2 8076044 8076092 -245180491 + (CA)n Simple_repeat Simple_repeat 1 48 0 250 270 176 0 chr2 8079187 8079261 -245177322 + L2 LINE L2 3186 3272 0 254 296 12 0 chr2 8079261 8079342 -245177241 + (TGAA)n Simple_repeat Simple_repeat 2 83 0 624 328 129 13 chr2 8079405 8080009 -245176574 + L2 LINE L2 2141 2814 -500 285 284 119 34 chr2 8080081 8080257 -245176326 + L2 LINE L2 2890 3080 -192 514 106 0 32 chr2 8080928 8080944 -245175639 + (GAAA)n Simple_repeat Simple_repeat 2 17 -75 1132 189 242 4 chr2 8080944 8081188 -245175395 + AluJb SINE Alu 1 302 0 514 106 0 32 chr2 8081188 8081265 -245175318 + (GAAA)n Simple_repeat Simple_repeat 17 92 0 281 328 53 8 chr2 8081547 8081678 -245174905 - MIR3 SINE MIR -61 147 11 2212 105 0 16 chr2 8081860 8082164 -245174419 - AluSx SINE Alu -13 299 1 675 234 34 34 chr2 8082619 8082826 -245173757 + L1ME LINE L1 5516 5719 -402 227 57 29 0 chr2 8083086 8083121 -245173462 + L1ME4a LINE L1 6085 6120 -1 198 304 76 13 chr2 8084178 8084257 -245172326 - MER5A DNA MER1_type -51 138 55 1258 316 113 14 chr2 8084433 8085088 -245171495 + L3 LINE CR1 615 1334 -243 216 328 59 51 chr2 8085135 8085391 -245171192 + L2 LINE L2 2844 3101 -171 215 204 0 0 chr2 8085511 8085555 -245171028 + GA-rich Low_complexity Low_complexity 1 44 0 3816 185 36 30 chr2 8086289 8087132 -245169451 + L1MB7 LINE L1 5337 6184 0 294 301 21 129 chr2 8089012 8089298 -245167285 - L2 LINE L2 -4 3268 3014 381 271 114 43 chr2 8089658 8089939 -245166644 - L1M4 LINE L1 -1771 4375 4075 24 53 0 0 chr2 8090307 8090345 -245166238 + AT_rich Low_complexity Low_complexity 1 38 0 226 416 112 0 chr2 8090351 8090476 -245166107 + L2 LINE L2 3134 3272 0 2795 197 18 9 chr2 8093196 8093745 -245162838 + MER89 LTR ERV1 4 557 -2 245 297 27 0 chr2 8094627 8094701 -245161882 + CT-rich Low_complexity Low_complexity 1 76 0 510 277 15 8 chr2 8095095 8095225 -245161358 + MER94 DNA DNA 3 133 -1 4119 112 30 11 chr2 8096054 8096677 -245159906 + MER41B LTR ERV1 1 635 0 2978 215 88 110 chr2 8097615 8098869 -245157714 + MER69B DNA AcHobo 1 1226 0 687 251 52 11 chr2 8099483 8099674 -245156909 - MLT2B1 LTR ERVL -3 517 319 1796 202 17 17 chr2 8099692 8100053 -245156530 + MLT1A2 LTR MaLR 14 374 0 1283 212 7 15 chr2 8100123 8100392 -245156191 - MLT2B1 LTR ERVL -253 267 1 1640 209 33 22 chr2 8100626 8100994 -245155589 - MLT1A2 LTR MaLR 0 374 3 13669 139 36 46 chr2 8101207 8103515 -245153068 + Tigger1 DNA MER2_type 14 2297 -121 1910 115 70 0 chr2 8103515 8103785 -245152798 + AluSx SINE Alu 9 297 -15 13669 139 36 46 chr2 8103785 8103906 -245152677 + Tigger1 DNA MER2_type 2297 2418 0 196 284 75 0 chr2 8104314 8104381 -245152202 + MIR3 SINE MIR 114 185 -23 186 380 70 6 chr2 8105743 8105914 -245150669 - MIR SINE MIR -80 182 1 2065 92 4 0 chr2 8106196 8106457 -245150126 + AluSq SINE Alu 36 297 -16 194 62 31 0 chr2 8106682 8106714 -245149869 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 309 174 0 0 chr2 8107867 8107936 -245148647 + (TAGA)n Simple_repeat Simple_repeat 1 69 0 208 298 83 24 chr2 8107955 8108039 -245148544 - MIR SINE MIR -70 192 104 333 322 65 37 chr2 8112111 8112325 -245144258 - MIR SINE MIR -11 251 32 2910 19 0 0 chr2 8112940 8113257 -245143326 - AluYb8 SINE Alu -1 317 1 530 223 30 81 chr2 8113306 8113442 -245143141 - MER112 DNA MER1_type -7 253 128 885 241 39 0 chr2 8113442 8113649 -245142934 + MER20 DNA MER1_type 4 218 -1 530 223 30 81 chr2 8113649 8113709 -245142874 - MER112 DNA MER1_type -132 128 67 228 35 0 0 chr2 8113829 8113858 -245142725 + (CA)n Simple_repeat Simple_repeat 2 30 0 249 213 0 80 chr2 8114194 8114269 -245142314 - MIR SINE MIR -78 184 116 303 244 24 0 chr2 8115492 8115574 -245141009 + L2 LINE L2 3133 3216 -56 209 195 0 0 chr2 8115660 8115701 -245140882 + L2 LINE L2 3265 3305 -8 229 169 28 84 chr2 8115754 8115825 -245140758 + L2 LINE L2 3201 3267 -5 32499 31 4 0 chr2 8116362 8120975 -245135608 + L1PA3 LINE L1 1527 6155 0 472 147 13 0 chr2 8121227 8121302 -245135281 - MER58 DNA MER1_type 0 2420 2345 259 175 18 53 chr2 8121330 8121387 -245135196 - MER58 DNA MER1_type -157 58 4 218 288 0 0 chr2 8121926 8121985 -245134598 + MIR SINE MIR 71 129 -133 21 0 0 0 chr2 8122807 8122828 -245133755 + AT_rich Low_complexity Low_complexity 1 21 0 183 271 35 35 chr2 8122833 8122918 -245133665 - MIR SINE MIR -102 160 76 294 29 0 0 chr2 8123118 8123153 -245133430 + (CA)n Simple_repeat Simple_repeat 2 36 0 22 0 0 0 chr2 8124418 8124440 -245132143 + AT_rich Low_complexity Low_complexity 1 22 0 1673 167 27 27 chr2 8125143 8125443 -245131140 + AluJo SINE Alu 1 300 -12 380 301 92 10 chr2 8125767 8125963 -245130620 + MIR SINE MIR 13 224 -38 449 283 7 0 chr2 8126051 8126196 -245130387 - MER117 DNA MER1_type -47 150 5 410 286 8 0 chr2 8127058 8127177 -245129406 + MIR SINE MIR 114 233 -29 1403 137 24 9 chr2 8127548 8127975 -245128608 + LTR54 LTR ERV1 2 510 0 397 175 19 0 chr2 8127978 8128081 -245128502 + (CA)n Simple_repeat Simple_repeat 2 106 0 662 277 59 4 chr2 8128622 8128860 -245127723 + MIR SINE MIR 3 253 -9 1079 137 0 120 chr2 8128934 8129168 -245127415 + L1MB5 LINE L1 5963 6168 -6 185 196 20 0 chr2 8129171 8129222 -245127361 + GA-rich Low_complexity Low_complexity 1 52 0 214 279 0 15 chr2 8129797 8129865 -245126718 + A-rich Low_complexity Low_complexity 2 68 0 226 205 72 48 chr2 8131585 8131668 -245124915 - L3 LINE CR1 -1 1576 1492 182 332 45 65 chr2 8132182 8132381 -245124202 - L2 LINE L2 -18 3254 3060 2096 128 155 13 chr2 8134379 8134754 -245121829 - MSTA LTR MaLR 0 428 1 22 0 0 0 chr2 8134919 8134941 -245121642 + AT_rich Low_complexity Low_complexity 1 22 0 267 303 0 13 chr2 8135973 8136049 -245120534 - MIR SINE MIR -26 236 162 297 129 32 32 chr2 8136052 8136114 -245120469 - MLT2B1 LTR ERVL 0 520 459 232 271 12 24 chr2 8136114 8136199 -245120384 - L1MC4 LINE L1 -1345 6697 6614 491 270 6 0 chr2 8136200 8136374 -245120209 + (TA)n Simple_repeat Simple_repeat 1 175 0 342 0 0 0 chr2 8136405 8136443 -245120140 + (TG)n Simple_repeat Simple_repeat 2 39 0 233 196 39 0 chr2 8136444 8136495 -245120088 + MLT2B1 LTR ERVL 468 520 0 242 271 59 0 chr2 8136682 8136767 -245119816 - L1MC4 LINE L1 -1339 6703 6614 244 160 40 0 chr2 8136806 8136856 -245119727 + MLT2B1 LTR ERVL 464 515 -5 288 253 0 13 chr2 8136861 8136940 -245119643 + MIR SINE MIR 159 236 -26 2410 150 7 6 chr2 8136983 8137367 -245119216 - MLT2D LTR ERVL -40 480 1 366 327 32 6 chr2 8137367 8137523 -245119060 - MIR SINE MIR -99 163 4 186 236 0 0 chr2 8137817 8137872 -245118711 + (TG)n Simple_repeat Simple_repeat 1 55 0 361 347 40 6 chr2 8138041 8138217 -245118366 + MIR SINE MIR 47 228 -34 1913 147 10 10 chr2 8138354 8138646 -245117937 + AluSx SINE Alu 1 292 -20 2214 218 23 14 chr2 8140067 8140549 -245116034 + L1MB5 LINE L1 5663 6139 -41 2186 86 0 7 chr2 8140549 8140827 -245115756 + AluY SINE Alu 1 276 -35 270 0 0 0 chr2 8140832 8140862 -245115721 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 2214 218 23 14 chr2 8140862 8140902 -245115681 + L1MB5 LINE L1 6142 6180 0 587 270 110 5 chr2 8141204 8141404 -245115179 - Charlie8 DNA MER1_type -2193 224 4 1187 262 52 37 chr2 8141893 8142377 -245114206 - LTR53 LTR ERVL -8 511 21 448 280 54 18 chr2 8142756 8142924 -245113659 - MIR SINE MIR -61 201 28 252 0 0 0 chr2 8143213 8143241 -245113342 + (TA)n Simple_repeat Simple_repeat 2 29 0 284 277 69 10 chr2 8144154 8144255 -245112328 + MIR SINE MIR 112 218 -44 2294 134 22 3 chr2 8144272 8144629 -245111954 + THE1B LTR MaLR 1 364 0 613 265 23 55 chr2 8144675 8144932 -245111651 - MIR SINE MIR 0 262 14 362 247 11 0 chr2 8144988 8145081 -245111502 - MIR SINE MIR -74 188 95 642 224 21 0 chr2 8145158 8145301 -245111282 + MIR SINE MIR 20 165 -97 186 43 0 0 chr2 8145334 8145357 -245111226 + (TAA)n Simple_repeat Simple_repeat 2 24 0 244 222 137 43 chr2 8145410 8145527 -245111056 + MER5A DNA MER1_type 9 136 -53 244 340 21 0 chr2 8146097 8146194 -245110389 - MER5A DNA MER1_type -5 184 86 2150 178 63 25 chr2 8146196 8146459 -245110124 - MLT1C LTR MaLR -1 466 178 348 24 0 0 chr2 8146459 8146500 -245110083 + (TG)n Simple_repeat Simple_repeat 2 42 0 2150 178 63 25 chr2 8146500 8146679 -245109904 - MLT1C LTR MaLR -289 178 7 191 59 0 59 chr2 8147048 8147082 -245109501 + (GAAA)n Simple_repeat Simple_repeat 1 32 0 360 0 0 0 chr2 8150507 8150547 -245106036 + (CA)n Simple_repeat Simple_repeat 1 40 0 2443 53 0 16 chr2 8150576 8150879 -245105704 - AluY SINE Alu -13 298 1 21 0 0 0 chr2 8150937 8150958 -245105625 + AT_rich Low_complexity Low_complexity 1 21 0 1176 137 0 0 chr2 8151976 8152144 -245104439 - AluSg/x SINE Alu -8 304 137 2275 114 3 0 chr2 8152438 8152746 -245103837 - AluSp SINE Alu -4 309 1 425 87 159 0 chr2 8154745 8154814 -245101769 + MADE1 DNA Mariner 1 80 0 862 165 0 0 chr2 8155466 8155599 -245100984 + FLAM_C SINE Alu 6 138 -5 2208 106 3 3 chr2 8156226 8156528 -245100055 - AluSp SINE Alu -11 302 1 350 274 21 17 chr2 8157015 8157214 -245099369 - L1ME4a LINE L1 -188 5933 5698 376 369 122 4 chr2 8157342 8157597 -245098986 - L3 LINE CR1 -864 713 429 206 62 31 0 chr2 8157749 8157781 -245098802 + (GAAAA)n Simple_repeat Simple_repeat 1 33 0 207 265 0 29 chr2 8158634 8158702 -245097881 - MIR SINE MIR 0 262 197 2067 132 35 6 chr2 8158706 8159017 -245097566 - MER2 DNA MER2_type -5 340 21 644 265 24 12 chr2 8159026 8159192 -245097391 - MIR SINE MIR -88 174 7 196 260 73 52 chr2 8159268 8159364 -245097219 - MIR SINE MIR -163 99 2 245 302 137 40 chr2 8160485 8160550 -245096033 - MIR SINE MIR 0 262 205 321 26 0 0 chr2 8160550 8160588 -245095995 + (TG)n Simple_repeat Simple_repeat 2 39 0 245 302 137 40 chr2 8160588 8160729 -245095854 - MIR SINE MIR -57 205 39 229 326 102 17 chr2 8162534 8162670 -245093913 + MIR3 SINE MIR 35 189 -19 364 322 66 61 chr2 8162867 8163324 -245093259 + L1M4 LINE L1 4818 5276 -870 6939 208 69 44 chr2 8163348 8165285 -245091298 + L1MDa LINE L1 311 2295 -4245 302 212 0 212 chr2 8165321 8165457 -245091126 + L1MDa LINE L1 2956 3029 -3511 2529 83 0 0 chr2 8165457 8165770 -245090813 - AluSq SINE Alu 0 313 1 302 212 0 212 chr2 8165770 8165855 -245090728 + L1MDa LINE L1 3029 3130 -3410 265 107 18 36 chr2 8165857 8165913 -245090670 + (GAAA)n Simple_repeat Simple_repeat 3 57 0 1808 289 47 7 chr2 8165926 8166643 -245089940 + L1MDa LINE L1 3134 3879 -2661 711 242 50 0 chr2 8166673 8166834 -245089749 + L1MD1 LINE L1 6055 6223 -19 618 265 52 45 chr2 8167011 8167415 -245089168 + L1MEc LINE L1 801 1207 -5356 1033 164 61 5 chr2 8167427 8167641 -245088942 + AluJb SINE Alu 86 311 -1 262 304 44 0 chr2 8167670 8167805 -245088778 + L1MEc LINE L1 1246 1386 -5177 1596 263 72 63 chr2 8167822 8167952 -245088631 + L1MEc LINE L1 1334 1461 -4921 1507 164 33 18 chr2 8167952 8168227 -245088356 + AluSq SINE Alu 23 301 -12 1596 263 72 63 chr2 8168227 8169340 -245087243 + L1MEc LINE L1 1461 2701 -3681 30611 33 0 1 chr2 8169346 8173725 -245082858 + L1PA4 LINE L1 1777 6152 -3 3827 231 42 35 chr2 8173740 8174992 -245081591 + L1MEc LINE L1 2709 3969 -2413 192 158 0 0 chr2 8175253 8175291 -245081292 + (CA)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chr2 8175502 8175523 -245081060 + AT_rich Low_complexity Low_complexity 1 21 0 182 203 108 54 chr2 8175674 8175748 -245080835 + MIR SINE MIR 112 189 -73 2153 74 15 4 chr2 8175781 8176052 -245080531 - AluSc SINE Alu -7 302 29 735 285 45 4 chr2 8176149 8176395 -245080188 + MIR SINE MIR 3 258 -4 409 317 94 6 chr2 8176898 8177078 -245079505 + MIR SINE MIR 53 248 -14 25 0 0 0 chr2 8177531 8177556 -245079027 + AT_rich Low_complexity Low_complexity 1 25 0 1008 72 0 226 chr2 8177653 8177874 -245078709 - Charlie3 DNA MER1_type -8 2702 2532 321 322 72 90 chr2 8177922 8178267 -245078316 - L1MEd LINE L1 -5769 350 12 23 0 0 0 chr2 8178287 8178310 -245078273 + AT_rich Low_complexity Low_complexity 1 23 0 281 233 189 83 chr2 8178524 8178704 -245077879 - MLT1J LTR MaLR -189 322 124 280 271 90 14 chr2 8179267 8179411 -245077172 - HAL1b LINE L1 -511 837 683 298 236 36 0 chr2 8179411 8179521 -245077062 + CT-rich Low_complexity Low_complexity 4 117 0 340 330 52 16 chr2 8179678 8179872 -245076711 - HAL1b LINE L1 -801 547 347 355 223 18 0 chr2 8180398 8180510 -245076073 + (TA)n Simple_repeat Simple_repeat 2 115 0 198 143 0 0 chr2 8182038 8182073 -245074510 + (CA)n Simple_repeat Simple_repeat 2 36 0 207 360 12 0 chr2 8182073 8182159 -245074424 + L3 LINE CR1 1335 1421 -156 948 122 23 0 chr2 8183393 8183565 -245073018 + CT-rich Low_complexity Low_complexity 4 179 0 282 29 0 0 chr2 8183704 8183739 -245072844 + (TG)n Simple_repeat Simple_repeat 1 35 0 182 265 20 0 chr2 8184146 8184195 -245072388 - L2 LINE L2 -1 3312 3263 180 0 0 0 chr2 8184398 8184418 -245072165 + (A)n Simple_repeat Simple_repeat 1 20 0 274 178 68 14 chr2 8184555 8184628 -245071955 + MER116 DNA Mariner 2 78 -2 824 234 10 39 chr2 8186984 8187189 -245069394 + MER58A DNA MER1_type 21 219 -5 249 312 104 40 chr2 8187431 8187633 -245068950 - L3 LINE CR1 -26 1551 1337 304 370 7 22 chr2 8188017 8188152 -245068431 + MIR3 SINE MIR 10 142 -66 224 277 71 36 chr2 8188797 8188909 -245067674 + MER5A DNA MER1_type 10 125 -64 2132 117 176 16 chr2 8188976 8189345 -245067238 - MSTA LTR MaLR 0 428 1 1007 167 0 0 chr2 8189560 8189716 -245066867 + AluSg/x SINE Alu 137 292 -20 312 307 97 40 chr2 8189726 8189954 -245066629 - L2 LINE L2 -924 2390 2150 1953 201 52 0 chr2 8191773 8192177 -245064406 - MLT1C LTR MaLR -9 458 34 189 154 0 0 chr2 8192180 8192219 -245064364 + T-rich Low_complexity Low_complexity 1 39 0 250 336 24 48 chr2 8192259 8192467 -245064116 - L2 LINE L2 -28 3285 3083 435 278 148 61 chr2 8192976 8193206 -245063377 + MIR SINE MIR 5 254 -8 223 323 15 0 chr2 8193285 8193350 -245063233 + L2 LINE L2 3207 3272 0 2725 148 38 68 chr2 8194132 8194318 -245062265 - L1MA4 LINE L1 -8 6292 6102 1890 141 11 7 chr2 8194318 8194602 -245061981 + AluSx SINE Alu 1 285 -27 2725 148 38 68 chr2 8194602 8194615 -245061968 - L1MA4 LINE L1 -198 6102 6090 288 0 0 0 chr2 8194615 8194647 -245061936 + (TA)n Simple_repeat Simple_repeat 1 32 0 2725 148 38 68 chr2 8194647 8195006 -245061577 - L1MA4 LINE L1 -210 6090 5750 328 283 0 92 chr2 8195995 8196147 -245060436 + MIR SINE MIR 117 254 -8 1853 190 61 54 chr2 8196213 8196911 -245059672 + L1ME4a LINE L1 2074 2755 -3785 1047 161 11 0 chr2 8196913 8197087 -245059496 + AluSg/x SINE Alu 137 312 0 6933 231 91 47 chr2 8197087 8200265 -245056318 + L1ME4a LINE L1 2746 6066 -687 537 95 24 0 chr2 8200273 8200357 -245056226 + L1MD2 LINE L1 6272 6357 -2 222 272 27 95 chr2 8200400 8200547 -245056036 + L2 LINE L2 3168 3304 -9 426 313 97 14 chr2 8200834 8201051 -245055532 - MIR SINE MIR 0 262 28 1780 188 0 0 chr2 8201170 8201483 -245055100 - AluJb SINE Alu 0 313 1 2111 115 26 10 chr2 8201897 8202201 -245054382 + AluSq SINE Alu 1 309 -4 450 287 8 0 chr2 8204604 8204726 -245051857 + MER94 DNA DNA 7 129 -5 320 260 7 55 chr2 8205962 8206108 -245050475 + L1ME4a LINE L1 6362 6500 -15 843 159 0 0 chr2 8207439 8207571 -245049012 + FLAM_C SINE Alu 2 133 0 225 231 51 51 chr2 8207866 8207944 -245048639 + MIR SINE MIR 111 188 -74 33 66 0 0 chr2 8208058 8208119 -245048464 + AT_rich Low_complexity Low_complexity 1 61 0 195 129 0 0 chr2 8208551 8208582 -245048001 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 183 184 20 20 chr2 8208838 8208887 -245047696 + MIR SINE MIR 25 73 -135 1302 171 80 47 chr2 8209910 8210209 -245046374 + AluJo SINE Alu 4 312 0 1320 219 67 31 chr2 8211476 8211836 -245044747 - MLT1B LTR MaLR -2 388 14 189 242 0 15 chr2 8212383 8212449 -245044134 - L2 LINE L2 -3 3269 3205 314 245 0 57 chr2 8212917 8213047 -245043536 + MIR SINE MIR 85 205 -57 280 284 159 28 chr2 8213149 8213325 -245043258 + MIR SINE MIR 21 219 -43 1931 173 80 30 chr2 8213737 8214151 -245042432 - MLT2D LTR ERVL 0 534 1 334 278 31 0 chr2 8214151 8214248 -245042335 + L2 LINE L2 3172 3271 -1 227 313 117 0 chr2 8214921 8215049 -245041534 - MIR3 SINE MIR -24 184 42 2946 198 37 7 chr2 8216569 8217184 -245039399 - MER99 DNA DNA -3 825 192 38 22 0 0 chr2 8217818 8217863 -245038720 + AT_rich Low_complexity Low_complexity 1 45 0 482 272 0 0 chr2 8217863 8217966 -245038617 - MER99 DNA DNA -724 104 2 353 283 126 31 chr2 8218508 8218731 -245037852 - LTR16A LTR ERVL -1 449 206 1603 181 54 7 chr2 8218890 8219188 -245037395 - AluJo SINE Alu 0 312 1 1223 248 97 16 chr2 8220550 8221103 -245035480 + L1MEc LINE L1 2202 2770 -3445 743 343 65 14 chr2 8221103 8221669 -245034914 - L1MEc LINE L1 -5754 642 48 560 269 22 0 chr2 8221954 8222088 -245034495 + MLT1J1 LTR MaLR 2 138 -308 2394 103 0 0 chr2 8222410 8222712 -245033871 - AluSx SINE Alu -10 302 1 283 286 60 0 chr2 8223118 8223202 -245033381 + LTR50 LTR ERVL 1 89 -706 1708 188 3 13 chr2 8224730 8225044 -245031539 + AluJb SINE Alu 1 311 -1 2277 163 143 13 chr2 8225672 8226191 -245030392 + LTR49 LTR ERV1 1 653 0 2028 246 51 22 chr2 8226711 8227256 -245029327 - MER119 DNA MER1_type -5 578 18 296 278 122 0 chr2 8227315 8227430 -245029153 + MIR SINE MIR 43 171 -37 271 296 44 37 chr2 8227550 8227685 -245028898 - MER5A DNA MER1_type -36 153 18 394 290 82 30 chr2 8229106 8229259 -245027324 - MIR SINE MIR -13 249 79 1967 132 31 0 chr2 8229259 8229546 -245027037 - AluY SINE Alu -15 296 1 394 290 82 30 chr2 8229546 8229623 -245026960 - MIR SINE MIR -183 79 7 1863 149 3 10 chr2 8229652 8229940 -245026643 + AluSx SINE Alu 1 286 -26 1128 184 130 27 chr2 8232221 8232520 -245024063 + MLT1C LTR MaLR 1 330 -137 687 241 0 14 chr2 8232691 8232832 -245023751 + MLT1C LTR MaLR 329 467 0 188 234 0 0 chr2 8234172 8234219 -245022364 - L2 LINE L2 -5 3308 3262 305 221 207 21 chr2 8234508 8234653 -245021930 + MIR SINE MIR 76 247 -15 2563 98 16 19 chr2 8235166 8235542 -245021041 + THE1C LTR MaLR 1 375 0 209 293 73 16 chr2 8237478 8237601 -245018982 + L2 LINE L2 3184 3313 0 23 54 0 0 chr2 8238711 8238748 -245017835 + AT_rich Low_complexity Low_complexity 1 37 0 203 388 0 0 chr2 8239162 8239242 -245017341 + L2 LINE L2 3190 3269 -3 2048 134 30 35 chr2 8239312 8239678 -245016905 + THE1B LTR MaLR 1 364 0 237 291 27 18 chr2 8240714 8240824 -245015759 - MER87 LTR ERV1 -32 509 399 530 294 93 4 chr2 8241557 8241826 -245014757 - L1MCb LINE L1 -5163 882 590 26 0 0 0 chr2 8241960 8241986 -245014597 + AT_rich Low_complexity Low_complexity 1 26 0 245 323 36 30 chr2 8242170 8242337 -245014246 + MER5B DNA MER1_type 7 174 -4 1319 229 15 76 chr2 8242526 8242932 -245013651 - MLT1B LTR MaLR -9 381 1 5326 98 35 4 chr2 8243085 8243836 -245012747 + MER4E LTR ERV1 1 774 -5 2126 114 4 0 chr2 8244835 8245138 -245011445 - AluSx SINE Alu 0 304 1 2164 108 10 25 chr2 8245752 8246066 -245010517 + AluSp SINE Alu 1 309 -4 264 317 12 0 chr2 8247716 8247798 -245008785 - MIR SINE MIR -107 155 73 663 153 0 0 chr2 8247908 8248039 -245008544 + (TAG)n Simple_repeat Simple_repeat 2 132 0 427 206 125 22 chr2 8248040 8248176 -245008407 - MIR SINE MIR -1 261 112 21 0 0 0 chr2 8249817 8249838 -245006745 + AT_rich Low_complexity Low_complexity 1 21 0 2106 96 4 0 chr2 8251395 8251709 -245004874 + AluSx SINE Alu 1 315 0 456 311 38 16 chr2 8252101 8252284 -245004299 + MIR SINE MIR 8 194 -68 213 94 0 0 chr2 8252782 8252814 -245003769 + (TCC)n Simple_repeat Simple_repeat 2 33 0 214 308 77 10 chr2 8253080 8253184 -245003399 - MIR SINE MIR -50 212 102 187 216 0 78 chr2 8253860 8253911 -245002672 - L2 LINE L2 -6 3307 3261 598 219 139 0 chr2 8256545 8256696 -244999887 + MIR SINE MIR 47 218 -44 1337 225 8 0 chr2 8258269 8258518 -244998065 + MLT1C LTR MaLR 207 457 -10 274 227 13 27 chr2 8258576 8258651 -244997932 + Charlie7 DNA MER1_type 29 102 -2510 23 68 0 0 chr2 8258755 8258799 -244997784 + AT_rich Low_complexity Low_complexity 1 44 0 2012 137 0 0 chr2 8258881 8259181 -244997402 + AluSq SINE Alu 11 310 -3 479 309 124 18 chr2 8259918 8260135 -244996448 + MIR SINE MIR 12 251 -11 2174 282 129 18 chr2 8261048 8261921 -244994662 + L2 LINE L2 1576 2545 -769 15569 123 27 5 chr2 8261991 8264351 -244992232 - Tigger1 DNA MER2_type -6 2412 1 304 240 62 121 chr2 8264486 8264941 -244991642 - L1MCc LINE L1 -4892 1531 1300 2396 97 77 3 chr2 8265072 8265411 -244991172 + THE1B LTR MaLR 1 364 0 294 333 140 0 chr2 8265748 8265862 -244990721 + MIR SINE MIR 97 226 -36 418 326 80 29 chr2 8267641 8267816 -244988767 - MIR3 SINE MIR -5 203 20 204 221 143 52 chr2 8268117 8268271 -244988312 - MIR3 SINE MIR -34 174 7 351 304 52 26 chr2 8268299 8268414 -244988169 - L2 LINE L2 -4 3309 3192 519 261 56 6 chr2 8268877 8269038 -244987545 - MER5B DNA MER1_type -8 170 2 2113 98 44 3 chr2 8269141 8269438 -244987145 + AluSq SINE Alu 1 309 -4 1028 119 68 6 chr2 8269499 8269676 -244986907 + MER53 DNA DNA 2 189 0 2017 140 7 0 chr2 8269870 8270178 -244986405 - AluSx SINE Alu -2 310 1 240 210 84 119 chr2 8270255 8270398 -244986185 - MIR SINE MIR -40 222 85 1205 199 66 6 chr2 8271282 8271720 -244984863 - MLT2B1 LTR ERVL 0 515 1 205 238 0 0 chr2 8271966 8272008 -244984575 + (CACG)n Simple_repeat Simple_repeat 4 45 0 2118 101 20 7 chr2 8272469 8272766 -244983817 - AluSx SINE Alu -11 301 1 245 360 141 27 chr2 8273089 8273500 -244983083 + L2 LINE L2 2851 3308 -5 279 0 0 0 chr2 8273860 8273891 -244982692 + (CACAA)n Simple_repeat Simple_repeat 4 34 0 2310 84 3 3 chr2 8274510 8274818 -244981765 - AluSp SINE Alu -5 308 1 295 268 14 0 chr2 8274818 8274889 -244981694 - MER5A DNA MER1_type -112 77 6 533 278 36 29 chr2 8277794 8278071 -244978512 + L1ME3A LINE L1 3803 4081 -2065 1970 153 38 46 chr2 8278073 8278440 -244978143 - THE1B LTR MaLR 0 364 1 364 327 36 0 chr2 8278483 8278593 -244977990 + MIR SINE MIR 16 129 -133 1699 182 90 54 chr2 8278599 8279043 -244977540 + MER31B LTR ERV1 7 466 0 511 260 0 0 chr2 8279050 8279177 -244977406 + MIR SINE MIR 136 262 0 21 0 0 0 chr2 8279255 8279276 -244977307 + AT_rich Low_complexity Low_complexity 1 21 0 1951 111 18 0 chr2 8279321 8279624 -244976959 + AluSp SINE Alu 1 308 0 328 293 79 0 chr2 8279705 8279920 -244976663 + L1ME3A LINE L1 4388 4619 -1527 237 233 58 39 chr2 8279970 8280073 -244976510 + L1ME3A LINE L1 4733 4837 -1309 357 281 80 76 chr2 8280104 8280328 -244976255 - MIR SINE MIR -4 258 34 233 179 0 0 chr2 8280631 8280670 -244975913 + L1ME3A LINE L1 5670 5708 -413 335 299 103 8 chr2 8280683 8280800 -244975783 + L1ME3A LINE L1 5743 5870 -300 1912 156 0 0 chr2 8281101 8281408 -244975175 + AluSx SINE Alu 1 307 -5 1212 302 160 43 chr2 8281417 8281967 -244974616 - L2 LINE L2 -633 2681 2197 2149 182 31 43 chr2 8281967 8282478 -244974105 + MLT1D LTR MaLR 1 505 0 1212 302 160 43 chr2 8282478 8282903 -244973680 - L2 LINE L2 -1117 2197 1592 432 336 32 19 chr2 8282987 8283231 -244973352 - LTR16A LTR ERVL -184 266 17 180 111 0 0 chr2 8283482 8283509 -244973074 + (GGGAA)n Simple_repeat Simple_repeat 2 28 0 194 348 29 0 chr2 8283568 8283637 -244972946 + MIR SINE MIR 64 134 -128 198 0 0 0 chr2 8284382 8284404 -244972179 + (TC)n Simple_repeat Simple_repeat 1 22 0 252 200 42 83 chr2 8285077 8285197 -244971386 + L1M4 LINE L1 2302 2416 -3730 195 42 0 0 chr2 8285230 8285254 -244971329 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 710 296 73 52 chr2 8285397 8285408 -244971175 - LTR16A LTR ERVL -59 398 389 2360 120 3 55 chr2 8285408 8285792 -244970791 + THE1B LTR MaLR 1 364 0 710 296 73 52 chr2 8285792 8286146 -244970437 - LTR16A LTR ERVL -68 389 16 654 352 43 26 chr2 8286294 8286876 -244969707 - HERV16 LTR ERVL -381 5383 4792 990 317 85 38 chr2 8286994 8287831 -244968752 - HERV16 LTR ERVL -879 4606 3718 1108 350 72 3 chr2 8288334 8288865 -244967718 - HERV16 LTR ERVL -1905 3091 2617 1167 291 81 31 chr2 8289068 8289932 -244966651 - HERV16 LTR ERVL -2381 2615 1715 1170 307 124 22 chr2 8289982 8290782 -244965801 - HERV16 LTR ERVL -3420 1576 818 753 77 19 0 chr2 8290814 8290918 -244965665 - AluY SINE Alu -9 302 197 284 315 63 9 chr2 8290942 8291053 -244965530 - HERV16 LTR ERVL -4347 649 533 278 277 0 0 chr2 8291121 8291186 -244965397 - HERV16 LTR ERVL -4570 426 362 768 264 30 26 chr2 8291380 8291611 -244964972 - LTR16A LTR ERVL -13 437 206 186 43 0 0 chr2 8291979 8292002 -244964581 + (TTG)n Simple_repeat Simple_repeat 2 24 0 763 162 0 0 chr2 8292011 8292128 -244964455 - FLAM_C SINE Alu -16 117 1 487 172 11 11 chr2 8292213 8292306 -244964277 - AluJ/FLAM SINE Alu -218 94 2 240 185 77 0 chr2 8292873 8292938 -244963645 + L2 LINE L2 3168 3237 -35 583 272 30 18 chr2 8293759 8293928 -244962655 + MIR SINE MIR 53 223 -39 232 355 53 20 chr2 8294109 8294261 -244962322 + MIR3 SINE MIR 51 207 -1 309 377 8 8 chr2 8295021 8295143 -244961440 + MIR3 SINE MIR 69 190 -18 1691 84 44 0 chr2 8296507 8296732 -244959851 + AluSq SINE Alu 1 235 -78 267 374 70 12 chr2 8296746 8296917 -244959666 + MIR3 SINE MIR 16 196 -12 284 336 114 14 chr2 8297740 8297880 -244958703 + L2 LINE L2 3118 3271 -1 222 222 206 0 chr2 8297922 8297985 -244958598 - L2 LINE L2 0 3272 3197 1130 212 35 12 chr2 8298653 8298908 -244957675 + MIR SINE MIR 1 261 -1 21 0 0 0 chr2 8298916 8298937 -244957646 + AT_rich Low_complexity Low_complexity 1 21 0 212 287 38 57 chr2 8299210 8299367 -244957216 + MIR3 SINE MIR 6 159 -49 1617 197 49 42 chr2 8300568 8300954 -244955629 + MER63B DNA MER1_type 43 431 -5 226 310 39 105 chr2 8300954 8301183 -244955400 + L2 LINE L2 2545 2758 -556 217 374 23 30 chr2 8301288 8301419 -244955164 + L2 LINE L2 2955 3084 -188 294 369 47 30 chr2 8301486 8301719 -244954864 + MIR SINE MIR 5 241 -21 380 326 10 18 chr2 8302087 8302216 -244954367 - MIR SINE MIR -69 139 10 186 231 31 46 chr2 8302388 8302453 -244954130 - L3 LINE CR1 -717 860 797 210 154 0 0 chr2 8302749 8302788 -244953795 + T-rich Low_complexity Low_complexity 3 41 0 2075 125 0 0 chr2 8303324 8303620 -244952963 - AluSx SINE Alu -16 296 1 575 224 33 26 chr2 8303642 8303794 -244952789 - MIR SINE MIR 0 262 110 280 23 23 0 chr2 8304526 8304570 -244952013 - L1MA3 LINE L1 0 6305 6261 1081 242 148 24 chr2 8304702 8305041 -244951542 + MLT1F LTR MaLR 133 513 -29 26 50 0 0 chr2 8305196 8305236 -244951347 + AT_rich Low_complexity Low_complexity 1 40 0 779 229 48 19 chr2 8305270 8305480 -244951103 + AluJo SINE Alu 5 220 -92 316 281 48 82 chr2 8305551 8305711 -244950872 + MER46C DNA MER2_type 7 156 -182 1821 104 4 0 chr2 8305711 8305960 -244950623 + AluSp SINE Alu 2 251 -62 316 281 48 82 chr2 8305960 8306069 -244950514 + MER46C DNA MER2_type 156 267 -71 1360 123 21 8 chr2 8306094 8306329 -244950254 + AluY SINE Alu 5 242 -69 313 221 83 50 chr2 8306521 8306700 -244949883 + L1M2 LINE L1 2725 3897 -2951 342 260 0 39 chr2 8306832 8306936 -244949647 - MIR SINE MIR -57 151 52 596 271 51 38 chr2 8306989 8307193 -244949390 + MIR SINE MIR 3 209 -53 2080 118 0 29 chr2 8307886 8308200 -244948383 + AluSx SINE Alu 1 305 -7 2037 112 3 13 chr2 8308213 8308517 -244948066 + AluSq SINE Alu 1 301 -12 1431 140 8 8 chr2 8308588 8308824 -244947759 + AluSq SINE Alu 1 236 -77 452 314 107 0 chr2 8309056 8309225 -244947358 + L1MC/D LINE L1 5525 5711 -2097 939 219 29 0 chr2 8309309 8309519 -244947064 + AluJo SINE Alu 81 296 -16 1764 140 25 0 chr2 8309675 8309953 -244946630 + AluSx SINE Alu 1 285 -27 268 24 24 24 chr2 8309960 8310002 -244946581 + (TAAAA)n Simple_repeat Simple_repeat 4 45 0 300 289 7 94 chr2 8310301 8310450 -244946133 + MIR3 SINE MIR 59 194 -14 2227 98 0 0 chr2 8310726 8311022 -244945561 + AluY SINE Alu 1 296 -15 1077 187 52 38 chr2 8311123 8311390 -244945193 + AluJo SINE Alu 1 271 -41 268 284 0 11 chr2 8311749 8311837 -244944746 + CT-rich Low_complexity Low_complexity 3 89 0 1743 166 0 16 chr2 8312157 8312464 -244944119 - AluSx SINE Alu -6 306 5 1797 169 3 10 chr2 8312570 8312884 -244943699 - AluJb SINE Alu 0 312 1 219 284 20 59 chr2 8312904 8313006 -244943577 + L2 LINE L2 3139 3236 -36 372 43 0 0 chr2 8313008 8313054 -244943529 + (TGAA)n Simple_repeat Simple_repeat 2 47 0 212 278 89 36 chr2 8313093 8313258 -244943325 + MIR SINE MIR 6 181 -27 735 225 69 32 chr2 8313526 8313628 -244942955 - L1MB5 LINE L1 0 6174 6077 1595 166 0 34 chr2 8313628 8313924 -244942659 - AluJo SINE Alu -26 286 1 735 225 69 32 chr2 8313924 8314039 -244942544 - L1MB5 LINE L1 -97 6077 5949 1847 141 0 26 chr2 8314258 8314563 -244942020 - AluSx SINE Alu -15 297 1 276 100 0 0 chr2 8314625 8314665 -244941918 + (TC)n Simple_repeat Simple_repeat 1 40 0 1704 103 0 9 chr2 8314954 8315186 -244941397 + MER30 DNA MER1_type 1 230 0 235 331 78 24 chr2 8315198 8315364 -244941219 - MIR SINE MIR -71 191 17 1683 147 29 4 chr2 8315512 8315791 -244940792 - AluJo SINE Alu -18 294 9 319 212 91 0 chr2 8315801 8315867 -244940716 - L1MC5 LINE L1 -438 7523 7452 2273 104 0 0 chr2 8315876 8316185 -244940398 + AluSx SINE Alu 1 309 -3 1489 157 0 4 chr2 8316285 8316527 -244940056 + AluJb SINE Alu 59 299 -13 301 223 39 77 chr2 8317296 8317426 -244939157 - L1MC5 LINE L1 -836 7125 7001 2022 130 3 0 chr2 8317427 8317726 -244938857 + AluSx SINE Alu 1 300 -12 263 113 9 209 chr2 8317943 8318045 -244938538 - L1ME1 LINE L1 -2 6176 6089 465 105 17 244 chr2 8318055 8318131 -244938452 - L1MA5A LINE L1 0 6297 6280 1659 172 3 0 chr2 8318131 8318416 -244938167 - AluJo SINE Alu -26 286 1 465 105 17 244 chr2 8318416 8318511 -244938072 - L1MA5A LINE L1 -17 6280 6165 659 127 9 0 chr2 8318535 8318645 -244937938 - L1MA5A LINE L1 -116 6181 6071 473 189 35 154 chr2 8318646 8318798 -244937785 - L1ME1 LINE L1 -59 6107 5983 2064 127 0 3 chr2 8318798 8319098 -244937485 - AluSx SINE Alu -13 299 1 473 189 35 154 chr2 8319098 8319146 -244937437 - L1ME1 LINE L1 -183 5983 5931 1241 183 61 0 chr2 8319158 8319437 -244937146 - AluSx SINE Alu -6 296 1 373 360 34 6 chr2 8320239 8320414 -244936169 + MIR SINE MIR 16 195 -67 3071 70 19 2 chr2 8320423 8320837 -244935746 + L1PA10 LINE L1 5743 6163 -5 24 0 0 0 chr2 8320913 8320937 -244935646 + AT_rich Low_complexity Low_complexity 1 24 0 205 350 17 50 chr2 8321977 8322097 -244934486 + L2 LINE L2 3157 3272 0 612 167 79 0 chr2 8322163 8322277 -244934306 - Charlie1 DNA MER1_type -1 2760 2638 201 342 95 37 chr2 8322536 8322726 -244933857 - MIR SINE MIR -39 223 23 305 278 103 0 chr2 8322996 8323093 -244933490 + L2 LINE L2 3158 3264 -8 202 150 25 0 chr2 8323104 8323144 -244933439 + (TA)n Simple_repeat Simple_repeat 2 42 0 22 35 0 0 chr2 8323152 8323181 -244933402 + AT_rich Low_complexity Low_complexity 1 29 0 292 244 154 41 chr2 8324182 8324305 -244932278 - L2 LINE L2 -1 3312 3176 271 373 54 54 chr2 8324394 8324673 -244931910 - L2 LINE L2 -340 2974 2696 22 35 0 0 chr2 8325552 8325581 -244931002 + AT_rich Low_complexity Low_complexity 1 29 0 183 298 0 18 chr2 8326096 8326153 -244930430 - MIR SINE MIR -126 136 81 1267 265 84 62 chr2 8326347 8326485 -244930098 + MLT1H1 LTR MaLR 2 135 -420 736 209 62 0 chr2 8326485 8326662 -244929921 - MER53 DNA DNA -1 188 1 1267 265 84 62 chr2 8326662 8327009 -244929574 + MLT1H1 LTR MaLR 135 498 -57 1802 135 14 0 chr2 8327009 8327290 -244929293 + AluSc SINE Alu 1 285 -24 1079 116 7 0 chr2 8327328 8327475 -244929108 + THE1B LTR MaLR 1 148 -216 1919 154 62 11 chr2 8329023 8329380 -244927203 - THE1C LTR MaLR 0 375 1 319 333 124 7 chr2 8329777 8329930 -244926653 - MIR SINE MIR -57 205 35 283 323 40 16 chr2 8330413 8330537 -244926046 + L3 LINE CR1 1385 1511 -66 1912 146 3 0 chr2 8330860 8331161 -244925422 + AluJb SINE Alu 1 302 -10 326 258 50 42 chr2 8332249 8332369 -244924214 - MIR SINE MIR -52 210 90 247 311 13 10 chr2 8332503 8332665 -244923918 - MIR SINE MIR -1 261 48 208 305 95 38 chr2 8332998 8333103 -244923480 + MER5B DNA MER1_type 54 164 -14 249 293 207 21 chr2 8333146 8333286 -244923297 + MER5A DNA MER1_type 4 169 -20 476 240 147 8 chr2 8333761 8333890 -244922693 + MIR SINE MIR 72 218 -44 180 0 0 0 chr2 8333936 8333956 -244922627 + (CA)n Simple_repeat Simple_repeat 1 20 0 297 198 58 12 chr2 8334023 8334109 -244922474 + L1ME4a LINE L1 6030 6119 -2 255 328 15 21 chr2 8334227 8334385 -244922198 + MIR SINE MIR 58 212 -50 230 154 26 0 chr2 8335671 8335710 -244920873 + MLT1I LTR MaLR 98 137 -272 569 273 97 6 chr2 8337547 8337723 -244918860 - MIR SINE MIR -55 207 16 673 296 71 4 chr2 8339358 8339584 -244916999 - MIR SINE MIR 0 262 22 223 198 49 111 chr2 8340868 8340949 -244915634 + MIR SINE MIR 111 186 -76 312 262 98 25 chr2 8341274 8341396 -244915187 + MER115 DNA AcHobo 100 230 -463 638 237 100 52 chr2 8341508 8341757 -244914826 + MER115 DNA AcHobo 426 686 -7 195 100 0 0 chr2 8341957 8341987 -244914596 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 354 230 97 26 chr2 8341987 8342100 -244914483 - L2 LINE L2 -13 3300 3180 23 0 0 0 chr2 8342711 8342734 -244913849 + AT_rich Low_complexity Low_complexity 1 23 0 1252 138 0 0 chr2 8343172 8343375 -244913208 + L1MA5 LINE L1 6097 6299 -1 700 236 44 58 chr2 8344985 8345210 -244911373 + MIR SINE MIR 31 252 -10 586 130 130 0 chr2 8345572 8345710 -244910873 + THE1B LTR MaLR 209 364 0 267 111 0 0 chr2 8345714 8345750 -244910833 + MLT1G LTR MaLR 555 590 0 1903 211 74 18 chr2 8346492 8346937 -244909646 + MLT1D LTR MaLR 36 505 0 504 324 89 12 chr2 8346949 8347196 -244909387 + L2 LINE L2 2671 2936 -378 270 307 64 21 chr2 8347196 8347391 -244909192 + MLT1J2 LTR MaLR 1 207 -239 205 293 49 37 chr2 8347461 8347543 -244909040 - L2 LINE L2 -620 2694 2612 860 245 28 36 chr2 8347581 8347834 -244908749 - MIR SINE MIR -10 252 2 2342 118 21 16 chr2 8348321 8348694 -244907889 - THE1C LTR MaLR 0 375 1 192 278 31 31 chr2 8349340 8349437 -244907146 + L2 LINE L2 2912 3008 -305 449 290 69 0 chr2 8349450 8349595 -244906988 - MIR SINE MIR -74 188 34 280 267 58 0 chr2 8349797 8349883 -244906700 - MER5A DNA MER1_type -77 112 22 509 206 109 23 chr2 8349937 8350112 -244906471 - LTR33 LTR ERVL -3 518 329 453 250 180 0 chr2 8351852 8351980 -244904603 - MIR SINE MIR -1 261 111 1926 125 21 14 chr2 8353612 8353901 -244902682 + AluSx SINE Alu 1 291 -21 306 170 0 0 chr2 8353909 8353956 -244902627 + MLT1G-int LTR MaLR 1684 1730 -5 1071 181 169 68 chr2 8354024 8354349 -244902234 - MLT1A1 LTR MaLR -7 358 1 2232 76 79 9 chr2 8354790 8355119 -244901464 + L1PB2 LINE L1 5799 6150 -1 506 284 43 38 chr2 8356000 8356116 -244900467 - L1ME4a LINE L1 -44 6077 5963 393 75 0 0 chr2 8356116 8356169 -244900414 + (CA)n Simple_repeat Simple_repeat 2 54 0 506 284 43 38 chr2 8356169 8356443 -244900140 - L1ME4a LINE L1 -158 5963 5685 240 35 0 0 chr2 8357406 8357435 -244899148 + (GGGGA)n Simple_repeat Simple_repeat 5 33 0 752 199 0 11 chr2 8357570 8357751 -244898832 + G-rich Low_complexity Low_complexity 2 180 0 201 195 0 0 chr2 8357749 8357790 -244898793 + GA-rich Low_complexity Low_complexity 1 41 0 * 310 207 14 83 chr2 8357900 8358045 -244898538 - MER103 DNA DNA 0 166 32 463 154 0 26 chr2 8358215 8358293 -244898290 + MER63 DNA MER1_type 42 743 -93 229 300 131 23 chr2 8358767 8358897 -244897686 - L2 LINE L2 -219 3053 2910 1478 211 42 20 chr2 8359492 8359847 -244896736 - MLT1A1 LTR MaLR -2 363 1 768 266 105 101 chr2 8360985 8361499 -244895084 + MLT1G LTR MaLR 18 581 -9 1437 194 24 78 chr2 8362012 8362424 -244894159 - MLT1B LTR MaLR 0 390 1 534 239 56 0 chr2 8362443 8362585 -244893998 + MLT1C LTR MaLR 317 466 -1 206 256 12 73 chr2 8362726 8362808 -244893775 + GA-rich Low_complexity Low_complexity 2 78 0 1816 150 3 3 chr2 8363402 8363696 -244892887 + AluJb SINE Alu 1 294 -18 2562 35 0 0 chr2 8363961 8364271 -244892312 + AluY SINE Alu 1 310 -1 261 0 0 0 chr2 8365360 8365389 -244891194 + (CA)n Simple_repeat Simple_repeat 1 29 0 270 0 0 0 chr2 8365465 8365495 -244891088 + (A)n Simple_repeat Simple_repeat 1 30 0 2760 115 24 21 chr2 8366638 8367063 -244889520 + MSTB LTR MaLR 1 426 0 222 313 15 0 chr2 8367693 8367760 -244888823 - MIR SINE MIR -63 145 78 252 325 150 35 chr2 8368292 8368492 -244888091 + MIR SINE MIR 34 256 -6 325 0 44 0 chr2 8368830 8368875 -244887708 + (CA)n Simple_repeat Simple_repeat 1 47 0 213 262 87 39 chr2 8368884 8368987 -244887596 + L3 LINE CR1 355 462 -1115 274 173 74 62 chr2 8369019 8369100 -244887483 - MIR SINE MIR -81 181 100 184 231 77 90 chr2 8369303 8369381 -244887202 - MIR SINE MIR -165 97 21 216 253 0 76 chr2 8370880 8370959 -244885624 - L2 LINE L2 0 3313 3241 1065 241 119 71 chr2 8371820 8372314 -244884269 + MLT1K LTR MaLR 70 587 -1 228 220 17 0 chr2 8372860 8372919 -244883664 + MER69 DNA AcHobo 22 81 -96 1065 259 69 13 chr2 8373370 8373745 -244882838 + MER69 DNA AcHobo 2094 2489 -37 525 299 32 87 chr2 8374101 8374458 -244882125 - L2 LINE L2 -887 2427 2101 1517 252 24 37 chr2 8374458 8374969 -244881614 + MLT1D LTR MaLR 1 504 -1 525 299 32 87 chr2 8374969 8375080 -244881503 - L2 LINE L2 -1213 2101 1985 309 377 8 8 chr2 8375233 8375355 -244881228 + MIR3 SINE MIR 69 190 -18 488 125 0 12 chr2 8377552 8377632 -244878951 - L1MA5 LINE L1 -125 6175 6097 23 0 0 0 chr2 8378070 8378093 -244878490 + AT_rich Low_complexity Low_complexity 1 23 0 1580 112 20 24 chr2 8378720 8378971 -244877612 - MSTB LTR MaLR -176 250 1 875 254 94 94 chr2 8380406 8380446 -244876137 - MLT1H1 LTR MaLR 0 555 516 2546 100 19 6 chr2 8380446 8380805 -244875778 - THE1B LTR MaLR 0 364 1 875 254 94 94 chr2 8380805 8380843 -244875740 - MLT1H1 LTR MaLR -39 516 479 1804 135 14 0 chr2 8380843 8381124 -244875459 - AluSc SINE Alu -24 285 1 875 254 94 94 chr2 8381124 8381458 -244875125 - MLT1H1 LTR MaLR -75 480 142 1867 155 0 13 chr2 8381774 8382083 -244874500 + AluSx SINE Alu 1 305 -7 463 157 67 94 chr2 8382358 8382532 -244874051 - L1MA8 LINE L1 -3 6288 6120 2049 124 3 7 chr2 8382574 8382881 -244873702 + AluSx SINE Alu 1 306 -6 23 0 0 0 chr2 8382920 8382943 -244873640 + AT_rich Low_complexity Low_complexity 1 23 0 877 183 89 10 chr2 8383378 8383684 -244872899 + L1MC/D LINE L1 5122 5446 -760 272 321 46 18 chr2 8383799 8383908 -244872675 + HAL1b LINE L1 800 911 -437 471 97 0 0 chr2 8384716 8384778 -244871805 - Alu SINE Alu -255 63 2 1865 129 41 7 chr2 8384884 8385179 -244871404 + AluSx SINE Alu 3 307 -5 1241 226 79 8 chr2 8385337 8385704 -244870879 - LTR37A LTR ERV1 0 426 34 7177 58 1 0 chr2 8385821 8387042 -244869541 + L1PA7 LINE L1 4957 6178 0 1946 114 3 10 chr2 8389109 8389398 -244867185 - AluSx SINE Alu -25 287 1 1434 191 3 3 chr2 8390689 8390992 -244865591 - AluSg SINE Alu -7 303 1 1122 314 46 24 chr2 8390996 8391537 -244865046 - L2 LINE L2 -541 2773 2221 267 318 61 21 chr2 8391575 8391731 -244864852 - MIR SINE MIR -62 146 9 429 122 0 0 chr2 8391911 8391985 -244864598 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 214 282 51 0 chr2 8392420 8392501 -244864082 - MIR SINE MIR -42 166 79 1012 127 10 35 chr2 8392513 8392938 -244863645 + (GGATG)n Simple_repeat Simple_repeat 1 591 0 180 268 0 0 chr2 8393500 8393541 -244863042 - MIR3 SINE MIR 0 208 168 231 146 0 0 chr2 8393601 8393642 -244862941 + (A)n Simple_repeat Simple_repeat 1 41 0 1822 153 10 3 chr2 8395497 8395805 -244860778 - AluSx SINE Alu -2 310 1 196 298 119 0 chr2 8396011 8396095 -244860488 + L2 LINE L2 3171 3264 -8 428 333 91 15 chr2 8396554 8396752 -244859831 + MIR SINE MIR 39 251 -11 210 320 87 10 chr2 8397278 8397381 -244859202 - L2 LINE L2 -4 3268 3158 332 329 73 81 chr2 8397494 8397838 -244858745 + L2 LINE L2 2932 3272 0 648 259 165 35 chr2 8398123 8398223 -244858360 + L1 LINE L1 3527 3613 -2533 1481 187 20 13 chr2 8398223 8398522 -244858061 - AluJb SINE Alu -11 301 1 648 259 165 35 chr2 8398522 8398791 -244857792 + L1 LINE L1 3613 3944 -2202 22 35 0 0 chr2 8398922 8398951 -244857632 + AT_rich Low_complexity Low_complexity 1 29 0 367 310 141 46 chr2 8399002 8399286 -244857297 + L1 LINE L1 4025 4335 -1811 1833 152 0 3 chr2 8399407 8399711 -244856872 + AluSx SINE Alu 1 303 0 23 0 0 0 chr2 8399914 8399937 -244856646 + AT_rich Low_complexity Low_complexity 1 23 0 276 296 87 36 chr2 8400161 8400357 -244856226 - L2 LINE L2 -212 3060 2855 262 232 0 0 chr2 8400437 8400493 -244856090 + MER4-int LTR ERV1 1107 1162 -5436 615 259 0 0 chr2 8400493 8401043 -244855540 + (TG)n Simple_repeat Simple_repeat 1 550 0 370 346 82 27 chr2 8401069 8401445 -244855138 - L2 LINE L2 -593 2721 2325 188 327 131 13 chr2 8402032 8402185 -244854398 - MIR SINE MIR -57 205 35 260 331 40 16 chr2 8402668 8402792 -244853791 + L3 LINE CR1 1385 1511 -66 1919 146 3 0 chr2 8403115 8403417 -244853166 + AluJb SINE Alu 1 303 -9 231 254 136 80 chr2 8404476 8404689 -244851894 - MIR SINE MIR -25 237 13 208 305 95 38 chr2 8405258 8405363 -244851220 + MER5B DNA MER1_type 54 164 -14 219 317 19 29 chr2 8405406 8405510 -244851073 + MER5A DNA MER1_type 4 106 -83 290 275 18 46 chr2 8406392 8406501 -244850082 + MIR SINE MIR 37 142 -66 324 350 0 0 chr2 8406749 8406852 -244849731 + CT-rich Low_complexity Low_complexity 4 106 0 1993 142 0 0 chr2 8406959 8407261 -244849322 + AluSx SINE Alu 1 302 -10 555 16 0 0 chr2 8407268 8407332 -244849251 + (GGAA)n Simple_repeat Simple_repeat 4 67 0 21 57 0 0 chr2 8408473 8408508 -244848075 + AT_rich Low_complexity Low_complexity 1 35 0 609 160 111 50 chr2 8408509 8408690 -244847893 + MER20 DNA MER1_type 1 192 -27 185 299 26 65 chr2 8413198 8413275 -244843308 - L2 LINE L2 -223 3049 2976 424 282 103 20 chr2 8413615 8413810 -244842773 + MIR SINE MIR 48 258 -4 1831 146 14 0 chr2 8415459 8415773 -244840810 - AluSx SINE Alu 0 312 1 340 301 9 9 chr2 8416081 8416194 -244840389 + MER94 DNA DNA 1 113 -21 185 62 0 31 chr2 8416634 8416666 -244839917 + (TA)n Simple_repeat Simple_repeat 1 31 0 21 0 0 0 chr2 8416997 8417018 -244839565 + AT_rich Low_complexity Low_complexity 1 21 0 1662 165 7 14 chr2 8417018 8417315 -244839268 + AluJb SINE Alu 1 295 -17 249 315 87 47 chr2 8418874 8419001 -244837582 + L2 LINE L2 3141 3272 0 444 258 44 85 chr2 8420525 8420669 -244835914 + L1ME4a LINE L1 5530 5661 -460 2269 97 3 0 chr2 8420669 8420979 -244835604 + AluSp SINE Alu 1 311 -2 444 258 44 85 chr2 8420979 8421082 -244835501 + L1ME4a LINE L1 5661 5767 -354 4188 80 11 25 chr2 8421156 8421718 -244834865 - MER41A LTR ERV1 0 554 1 402 366 24 0 chr2 8421727 8421891 -244834692 + MIR SINE MIR 83 250 -12 339 232 89 0 chr2 8422079 8422191 -244834392 + L1ME4a LINE L1 5991 6112 -9 241 269 0 0 chr2 8422235 8422287 -244834296 - L3 LINE CR1 -7 1570 1519 335 277 32 11 chr2 8422435 8422529 -244834054 + L2 LINE L2 3173 3268 -4 3751 142 48 2 chr2 8422684 8423291 -244833292 + MER41B LTR ERV1 1 635 0 717 237 19 13 chr2 8424551 8424707 -244831876 - MER5B DNA MER1_type -21 157 1 350 311 68 0 chr2 8425141 8425244 -244831339 - L2 LINE L2 -46 3226 3117 2747 133 166 0 chr2 8425537 8425989 -244830594 - MER1A DNA MER1_type -1 528 2 316 296 86 49 chr2 8426589 8426751 -244829832 - MIR3 SINE MIR -11 197 30 711 276 70 0 chr2 8429405 8429604 -244826979 - MIR SINE MIR -36 226 14 402 21 0 0 chr2 8432251 8432298 -244824285 + (CATA)n Simple_repeat Simple_repeat 1 47 0 272 321 46 18 chr2 8433346 8433455 -244823128 - HAL1b LINE L1 -437 911 800 1100 173 82 8 chr2 8433570 8433901 -244822682 - L1MC/D LINE L1 -760 5386 5097 303 248 111 26 chr2 8433929 8434046 -244822537 - HAL1b LINE L1 -476 872 746 22 88 0 0 chr2 8434073 8434130 -244822453 + AT_rich Low_complexity Low_complexity 1 57 0 2256 87 0 7 chr2 8434210 8434520 -244822063 - AluY SINE Alu -3 308 1 566 192 54 15 chr2 8434940 8435070 -244821513 + MIR SINE MIR 108 242 -20 570 277 70 18 chr2 8435099 8435384 -244821199 - HAL1 LINE L1 -834 1673 1374 473 283 29 83 chr2 8435390 8435656 -244820927 - L1MEd LINE L1 -1248 1242 930 683 328 37 61 chr2 8435843 8436325 -244820258 - L1MEd LINE L1 -1248 1242 794 294 286 84 59 chr2 8437014 8437287 -244819296 - HERV16 LTR ERVL -505 5259 4980 348 305 106 69 chr2 8437325 8437478 -244819105 - HERV16 LTR ERVL -931 4833 4687 1848 112 0 121 chr2 8437478 8437818 -244818765 - AluSx SINE Alu -3 299 1 348 305 106 69 chr2 8437818 8438126 -244818457 - HERV16 LTR ERVL -1077 4687 4355 1094 304 92 27 chr2 8438313 8439133 -244817450 - HERV16 LTR ERVL -2691 2305 1709 1883 307 73 44 chr2 8439480 8440002 -244816581 - HERV16 LTR ERVL -3785 1211 706 3276 133 82 0 chr2 8440002 8440489 -244816094 - MER1A DNA MER1_type 0 527 1 1883 307 73 44 chr2 8440489 8441072 -244815511 - HERV16 LTR ERVL -4290 706 74 291 268 0 0 chr2 8441674 8441745 -244814838 + CT-rich Low_complexity Low_complexity 3 73 0 27 0 0 0 chr2 8442626 8442653 -244813930 + AT_rich Low_complexity Low_complexity 1 27 0 198 217 0 36 chr2 8443124 8443207 -244813376 + CT-rich Low_complexity Low_complexity 3 82 0 892 182 109 28 chr2 8443309 8443401 -244813182 - ORSL DNA AcHobo 0 275 192 5560 48 6 0 chr2 8443401 8444074 -244812509 + L1PA7 LINE L1 5473 6149 -5 892 182 109 28 chr2 8444074 8444228 -244812355 - ORSL DNA AcHobo -83 192 9 513 269 40 23 chr2 8444265 8444440 -244812143 - MER5B DNA MER1_type 0 178 1 256 245 174 52 chr2 8444447 8444602 -244811981 - MER5A DNA MER1_type -3 186 13 493 293 84 27 chr2 8444678 8444903 -244811680 - MIR SINE MIR -13 249 12 2057 116 7 10 chr2 8445162 8445472 -244811111 + AluSx SINE Alu 1 309 -3 765 184 40 17 chr2 8445779 8445953 -244810630 - Zaphod DNA AcHobo -257 3774 3597 2118 244 92 34 chr2 8445954 8446738 -244809845 - Zaphod DNA AcHobo -3042 989 161 1630 205 89 27 chr2 8446768 8447217 -244809366 - MLT1D LTR MaLR -28 477 1 426 208 77 54 chr2 8447224 8447354 -244809229 - Zaphod DNA AcHobo -3875 156 24 193 324 59 0 chr2 8447386 8447454 -244809129 + MIR SINE MIR 185 256 -6 248 289 114 48 chr2 8448407 8448819 -244807764 + L1MC4a LINE L1 4334 4772 -1374 860 317 48 33 chr2 8449209 8449814 -244806769 + L1MC4a LINE L1 5292 5905 -1903 2332 71 0 0 chr2 8449969 8450263 -244806320 - AluY SINE Alu -16 295 2 242 235 37 25 chr2 8450288 8450369 -244806214 + CT-rich Low_complexity Low_complexity 4 85 0 408 238 57 78 chr2 8450392 8450461 -244806122 + L1ME4a LINE L1 5933 6002 -119 1828 162 26 18 chr2 8450461 8450800 -244805783 + MER2 DNA MER2_type 3 344 0 408 238 57 78 chr2 8450800 8450923 -244805660 + L1ME4a LINE L1 6002 6121 0 252 304 78 35 chr2 8451206 8451321 -244805262 - L2 LINE L2 -8 3305 3186 223 247 0 90 chr2 8452499 8452677 -244803906 + (TTGGGG)n Simple_repeat Simple_repeat 6 167 0 329 295 0 0 chr2 8452783 8452878 -244803705 + (TG)n Simple_repeat Simple_repeat 2 96 0 2231 153 75 0 chr2 8454260 8454658 -244801925 + MSTA LTR MaLR 1 428 0 475 72 0 12 chr2 8454756 8454839 -244801744 - MER96B DNA MER1_type? -239 178 97 912 119 3 226 chr2 8454870 8455207 -244801376 + L1MA4 LINE L1 6030 6291 -9 295 150 17 0 chr2 8455220 8455280 -244801303 - MER96B DNA MER1_type? -307 110 50 525 288 112 15 chr2 8455627 8455832 -244800751 + MIR SINE MIR 28 252 -10 235 178 14 55 chr2 8456679 8456752 -244799831 + MLT1J LTR MaLR 429 600 -15 2140 133 0 0 chr2 8458794 8459094 -244797489 - AluSx SINE Alu -12 300 1 2216 125 0 0 chr2 8459256 8459553 -244797030 + AluSg SINE Alu 1 297 -13 404 236 6 0 chr2 8460070 8460248 -244796335 + CT-rich Low_complexity Low_complexity 2 180 0 541 307 53 5 chr2 8460663 8460852 -244795731 - MIR SINE MIR -1 261 64 866 217 66 26 chr2 8461170 8461474 -244795109 - MER33 DNA MER1_type 0 324 9 409 318 88 7 chr2 8461742 8461890 -244794693 + MIR SINE MIR 88 247 -15 2794 10 0 0 chr2 8463531 8463827 -244792756 - AluYb8 SINE Alu -2 316 21 322 333 111 0 chr2 8463989 8464124 -244792459 + L2 LINE L2 3121 3270 -2 2341 114 0 0 chr2 8465594 8465900 -244790683 - AluSx SINE Alu -6 306 1 440 300 36 0 chr2 8465902 8466042 -244790541 - MIR SINE MIR -70 192 48 203 274 219 14 chr2 8466939 8467085 -244789498 + MIR SINE MIR 87 262 0 205 290 87 0 chr2 8467294 8467363 -244789220 - MIR SINE MIR -136 126 52 319 320 66 39 chr2 8468163 8468344 -244788239 - MIR SINE MIR -57 205 20 432 188 10 30 chr2 8469097 8469198 -244787385 - MIR3 SINE MIR -7 201 103 216 320 30 40 chr2 8469886 8469986 -244786597 + MIR SINE MIR 45 143 -65 341 333 79 12 chr2 8471073 8471238 -244785345 + L1MB4 LINE L1 4637 4812 -1334 226 266 11 21 chr2 8471305 8471399 -244785184 + L1MB4 LINE L1 4918 5010 -1136 2352 222 3 53 chr2 8471613 8471875 -244784708 + L1MB4 LINE L1 5570 5844 -336 2527 57 0 63 chr2 8471875 8472207 -244784376 + AluY SINE Alu 1 311 0 2352 222 3 53 chr2 8472207 8472583 -244784000 + L1MB4 LINE L1 5844 6176 -4 1568 213 22 14 chr2 8472583 8472945 -244783638 + L1MB8 LINE L1 5814 6178 0 854 291 137 18 chr2 8472958 8473577 -244783006 + L1ME3A LINE L1 5263 5955 -215 1295 124 30 0 chr2 8473785 8473986 -244782597 + L1PA10 LINE L1 5962 6168 0 2191 91 18 3 chr2 8475177 8475462 -244781121 - AluSx SINE Alu -14 298 10 296 173 0 0 chr2 8476047 8476099 -244780484 + MADE1 DNA Mariner 29 80 0 809 138 0 36 chr2 8476161 8476299 -244780284 - FLAM_C SINE Alu 0 133 1 528 122 0 0 chr2 8476740 8476822 -244779761 + (TTCC)n Simple_repeat Simple_repeat 3 84 0 234 224 35 35 chr2 8478608 8478693 -244777890 - MLT1K LTR MaLR -13 575 491 234 260 77 96 chr2 8478940 8479044 -244777539 - MER5A DNA MER1_type -84 105 4 356 241 11 35 chr2 8479055 8479142 -244777441 - MIR SINE MIR -165 97 13 312 27 0 0 chr2 8480824 8480861 -244775722 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 259 283 137 47 chr2 8482203 8482415 -244774168 + MLT1L LTR MaLR 2 232 -383 35 0 0 0 chr2 8483126 8483161 -244773422 + AT_rich Low_complexity Low_complexity 1 35 0 625 324 29 11 chr2 8483176 8483448 -244773135 + MLT1L LTR MaLR 6 282 -333 388 177 76 0 chr2 8483587 8483666 -244772917 - MLT1J1 LTR MaLR -123 323 239 532 184 3 0 chr2 8483908 8484015 -244772568 - MLT1J1 LTR MaLR -317 133 25 526 229 30 8 chr2 8484012 8484143 -244772440 - MER45A DNA AcHobo -30 148 15 * 578 111 30 0 chr2 8484958 8485057 -244771526 + (ATGGTG)n Simple_repeat Simple_repeat 4 105 0 353 276 143 0 chr2 8485507 8485612 -244770971 - MIR SINE MIR -20 242 123 1921 125 86 44 chr2 8485829 8486189 -244770394 - THE1C LTR MaLR 0 375 1 299 311 36 24 chr2 8486390 8486557 -244770026 - L1ME4a LINE L1 -18 6103 5935 912 258 26 45 chr2 8486630 8487052 -244769531 - L1ME4a LINE L1 -161 5960 5547 2498 157 9 19 chr2 8488547 8489012 -244767571 - L1MB1 LINE L1 0 6168 5709 217 325 50 0 chr2 8489013 8489093 -244767490 - MIR SINE MIR -110 152 69 376 301 5 88 chr2 8489345 8489387 -244767196 - MER5B DNA MER1_type -1 177 133 2267 43 75 7 chr2 8489387 8489669 -244766914 - AluY SINE Alu -10 301 1 376 301 5 88 chr2 8489669 8489819 -244766764 - MER5B DNA MER1_type -45 133 1 362 266 105 0 chr2 8491592 8491716 -244764867 - MIR SINE MIR -23 239 103 501 211 141 14 chr2 8491956 8492098 -244764485 + MER3 DNA MER1_type 36 195 -14 444 246 42 0 chr2 8494417 8494535 -244762048 - MIR SINE MIR -62 146 24 2362 75 0 13 chr2 8495221 8495526 -244761057 - AluY SINE Alu -10 301 1 180 111 0 0 chr2 8496350 8496377 -244760206 + (GAAAA)n Simple_repeat Simple_repeat 3 29 0 645 248 63 33 chr2 8496654 8497079 -244759504 - MLT1C LTR MaLR -3 464 2 280 349 8 31 chr2 8499352 8499481 -244757102 - L3 LINE CR1 -63 1514 1389 241 280 32 32 chr2 8499553 8499646 -244756937 - MIR SINE MIR -74 188 96 239 324 59 35 chr2 8499732 8499902 -244756681 - L3 LINE CR1 -183 1394 1221 2888 131 20 4 chr2 8500026 8500483 -244756100 - L1PA16 LINE L1 0 6166 5703 344 274 228 23 chr2 8501138 8501353 -244755230 + MIR SINE MIR 1 259 -3 528 318 112 9 chr2 8501762 8501995 -244754588 + MIR SINE MIR 3 259 -3 185 91 0 30 chr2 8502814 8502847 -244753736 + (GGGA)n Simple_repeat Simple_repeat 4 35 0 454 359 30 0 chr2 8503654 8503821 -244752762 - MIR SINE MIR -70 192 21 492 269 52 68 chr2 8503833 8504272 -244752311 + L1ME4a LINE L1 5520 5951 -170 382 246 36 14 chr2 8504425 8504563 -244752020 + L1ME4a LINE L1 5965 6105 -16 1354 130 5 0 chr2 8504575 8504782 -244751801 - AluSp SINE Alu -3 310 103 184 264 171 64 chr2 8505885 8506025 -244750558 + MIR3 SINE MIR 30 184 -24 2136 142 52 37 chr2 8506129 8506673 -244749910 + MLT2A2 LTR ERVL 1 554 0 1545 166 18 3 chr2 8507044 8507327 -244749256 - MLT1B LTR MaLR -8 382 96 26 30 0 0 chr2 8507349 8507382 -244749201 + AT_rich Low_complexity Low_complexity 1 33 0 2114 42 98 0 chr2 8507453 8507718 -244748865 - L1PA5 LINE L1 -7 6147 5857 244 246 53 0 chr2 8507718 8507775 -244748808 - MLT1B LTR MaLR -330 60 1 227 347 0 11 chr2 8508006 8508101 -244748482 + MIR SINE MIR 71 164 -98 2601 167 5 14 chr2 8508456 8508888 -244747695 + MSTA LTR MaLR 1 428 0 189 386 0 20 chr2 8509102 8509203 -244747380 + MIR SINE MIR 49 147 -115 218 286 0 32 chr2 8509286 8509349 -244747234 + MIR SINE MIR 196 256 -6 372 284 17 57 chr2 8510459 8510613 -244745970 - MIR SINE MIR -14 248 100 2431 143 59 7 chr2 8510613 8511020 -244745563 + MSTA LTR MaLR 1 428 0 372 284 17 57 chr2 8511020 8511041 -244745542 - MIR SINE MIR -162 100 80 473 168 184 0 chr2 8512219 8512344 -244744239 + LTR16C LTR ERVL 228 375 -116 1154 211 81 88 chr2 8512392 8512485 -244744098 + MLT1C LTR MaLR 16 108 -359 2565 85 48 20 chr2 8512485 8512839 -244743744 - THE1B LTR MaLR 0 364 1 1154 211 81 88 chr2 8512839 8513190 -244743393 + MLT1C LTR MaLR 108 457 -10 421 175 97 35 chr2 8513199 8513313 -244743270 + LTR16C LTR ERVL 371 491 0 241 306 28 0 chr2 8513909 8513981 -244742602 + MIR3 SINE MIR 112 185 -23 208 333 76 49 chr2 8514024 8514168 -244742415 + MIR SINE MIR 109 256 -6 1339 209 23 83 chr2 8514859 8515257 -244741326 - MLT1A2 LTR MaLR 0 374 1 199 286 107 27 chr2 8515436 8515548 -244741035 - MIR SINE MIR -33 229 109 2093 123 3 0 chr2 8515559 8515859 -244740724 + AluSx SINE Alu 1 301 -11 485 353 105 0 chr2 8516712 8516902 -244739681 + MIR SINE MIR 53 262 0 244 264 132 9 chr2 8517481 8517587 -244738996 - MIR SINE MIR -65 197 79 218 81 27 0 chr2 8518326 8518363 -244738220 + (TCC)n Simple_repeat Simple_repeat 1 38 0 263 311 81 20 chr2 8518684 8518832 -244737751 + MIR SINE MIR 71 227 -35 186 328 17 0 chr2 8519152 8519210 -244737373 + L2 LINE L2 3245 3303 -10 321 236 0 0 chr2 8519226 8519298 -244737285 - MIR SINE MIR -138 124 53 501 254 46 130 chr2 8519647 8519727 -244736856 - MIR SINE MIR -2 260 175 1855 130 7 3 chr2 8519727 8520012 -244736571 + AluSx SINE Alu 6 291 -21 225 0 0 0 chr2 8520012 8520037 -244736546 + (TA)n Simple_repeat Simple_repeat 1 25 0 501 254 46 130 chr2 8520037 8520239 -244736344 - MIR SINE MIR -85 177 1 487 290 12 25 chr2 8521080 8521242 -244735341 - MER63 DNA MER1_type -276 786 1 202 133 0 0 chr2 8521486 8521516 -244735067 + MIR SINE MIR 117 146 -62 302 123 18 18 chr2 8522498 8522555 -244734028 + LTR33A LTR ERVL 447 503 -20 290 260 39 13 chr2 8524049 8524126 -244732457 + LTR67 LTR ERVL 99 177 -380 * 716 273 51 72 chr2 8524085 8524514 -244732069 + MLT1L LTR MaLR 196 615 0 328 343 84 17 chr2 8524542 8524720 -244731863 - L1MC4a LINE L1 -1878 5930 5741 422 261 92 15 chr2 8525892 8526022 -244730561 - MIR3 SINE MIR -16 192 53 419 308 39 19 chr2 8526046 8526202 -244730381 - MIR SINE MIR -70 192 34 2504 198 98 100 chr2 8526397 8526463 -244730120 + L1MC3 LINE L1 6840 6905 -880 1684 153 0 27 chr2 8526463 8526757 -244729826 + AluJo SINE Alu 14 299 -13 2504 198 98 100 chr2 8526757 8526971 -244729612 + L1MC3 LINE L1 6905 7118 -667 282 200 0 17 chr2 8526971 8527031 -244729552 + MLT1C LTR MaLR 50 108 -459 2504 198 98 100 chr2 8527031 8527637 -244728946 + L1MC3 LINE L1 7118 7784 -1 411 314 59 12 chr2 8527674 8527843 -244728740 + MER5B DNA MER1_type 2 178 0 213 161 286 0 chr2 8528860 8528916 -244727667 - MIR SINE MIR -121 141 70 453 158 0 0 chr2 8529153 8529229 -244727354 + L1MB3 LINE L1 6101 6176 -7 380 123 14 0 chr2 8530962 8531035 -244725548 + (CA)n Simple_repeat Simple_repeat 1 74 0 192 270 139 74 chr2 8531985 8532200 -244724383 + L2 LINE L2 2437 2665 -649 431 228 18 78 chr2 8532563 8532730 -244723853 + MIR SINE MIR 96 252 -10 2238 113 0 0 chr2 8532924 8533225 -244723358 - AluSq SINE Alu -8 305 5 235 308 0 0 chr2 8533708 8533884 -244722699 + GA-rich Low_complexity Low_complexity 1 176 0 2899 206 113 10 chr2 8533900 8534614 -244721969 + Charlie1a DNA MER1_type 109 896 -559 289 179 0 36 chr2 8535096 8535180 -244721403 - L1MA7 LINE L1 -147 6144 6064 850 105 15 0 chr2 8535180 8535306 -244721277 + L1MA7 LINE L1 6157 6291 0 733 220 77 0 chr2 8535681 8535863 -244720720 + MLT1C LTR MaLR 270 465 -2 406 293 0 0 chr2 8535877 8535976 -244720607 - MIR SINE MIR -107 155 57 255 301 221 15 chr2 8536221 8536420 -244720163 + MIR SINE MIR 22 261 -1 180 380 60 0 chr2 8538205 8538305 -244718278 - MIR SINE MIR -59 203 98 299 309 131 36 chr2 8538439 8538691 -244717892 - L3b LINE CR1 -164 1419 1144 236 306 13 19 chr2 8540720 8540877 -244715706 + CT-rich Low_complexity Low_complexity 2 157 0 250 311 68 0 chr2 8543223 8543326 -244713257 - L2 LINE L2 -214 3058 2949 195 152 0 0 chr2 8543801 8543834 -244712749 - MIR SINE MIR -117 145 113 181 277 15 0 chr2 8544896 8544961 -244711622 + L2 LINE L2 2703 2768 -546 495 243 97 5 chr2 8544975 8545160 -244711423 - MIR SINE MIR -15 247 46 348 254 107 57 chr2 8546951 8547128 -244709455 - MIR SINE MIR -55 207 22 363 195 13 0 chr2 8548261 8548338 -244708245 + MIR SINE MIR 66 143 -119 548 208 104 69 chr2 8548891 8549064 -244707519 + MER63A DNA MER1_type 3 181 -29 456 221 82 76 chr2 8549202 8549360 -244707223 + MIR SINE MIR 17 175 -87 304 346 121 27 chr2 8549440 8550416 -244706167 + L2 LINE L2 1675 2742 -572 411 258 93 7 chr2 8550860 8551011 -244705572 - MER20B DNA MER1_type -604 179 16 338 273 99 16 chr2 8551019 8551140 -244705443 + L2 LINE L2 3142 3272 0 2071 158 92 8 chr2 8552087 8552480 -244704103 + MSTB LTR MaLR 1 426 0 916 278 14 0 chr2 8552674 8552897 -244703686 - MIR SINE MIR -25 237 12 860 273 96 35 chr2 8552912 8553404 -244703179 - MLT1F1 LTR MaLR 0 567 1 3681 215 30 30 chr2 8555360 8555583 -244701000 - Charlie1 DNA MER1_type -7 2754 2532 2378 101 0 3 chr2 8555583 8555891 -244700692 - AluSx SINE Alu -1 311 5 3681 215 30 30 chr2 8555891 8556605 -244699978 - Charlie1 DNA MER1_type -228 2533 1817 383 244 37 37 chr2 8557132 8557267 -244699316 + MIR3 SINE MIR 38 172 -36 2410 208 50 11 chr2 8557584 8558142 -244698441 + MLT1G LTR MaLR 11 590 0 520 314 105 56 chr2 8558210 8559147 -244697436 + L1ME2 LINE L1 4974 7750 -211 324 269 21 78 chr2 8559488 8559629 -244696954 + MER69A DNA AcHobo 28 160 -17 1684 271 39 58 chr2 8560301 8561020 -244695563 + L1M3c LINE L1 1 705 -5436 650 207 8 32 chr2 8561016 8561254 -244695329 + L1M3c LINE L1 1341 1661 -4550 * 463 177 0 0 chr2 8561255 8561334 -244695249 - Tigger5 DNA MER2_type 0 2323 2245 * 1212 211 4 22 chr2 8561328 8561560 -244695023 - Tigger5 DNA MER2_type -2095 228 1 1555 263 99 9 chr2 8561565 8561974 -244694609 + L1M4c LINE L1 1436 1807 -4575 2115 125 0 0 chr2 8561974 8562287 -244694296 - AluSg SINE Alu 0 313 1 1555 263 99 9 chr2 8562287 8563056 -244693527 + L1M4c LINE L1 1807 2760 -3622 1656 104 5 0 chr2 8563056 8563268 -244693315 - AluSq SINE Alu -19 294 82 1555 263 99 9 chr2 8563268 8563387 -244693196 + L1M4c LINE L1 2760 2867 -3515 1770 166 48 17 chr2 8563387 8563594 -244692989 + L1MA9 LINE L1 5105 5304 -1008 7387 21 0 0 chr2 8563594 8564514 -244692069 - L1PA4 LINE L1 -11 6144 5224 1770 166 48 17 chr2 8564514 8565098 -244691485 + L1MA9 LINE L1 5304 6143 -169 1770 139 52 12 chr2 8565098 8565443 -244691140 + L1MA9 LINE L1 5954 6312 0 1770 166 48 17 chr2 8565443 8565619 -244690964 + L1MA9 LINE L1 6143 6312 0 227 250 17 0 chr2 8565663 8565723 -244690860 + L1MB1 LINE L1 6102 6162 -6 2409 84 0 7 chr2 8565725 8566023 -244690560 - AluY SINE Alu -15 296 1 583 264 6 12 chr2 8566048 8566211 -244690372 + L1MA10 LINE L1 6159 6320 -14 596 315 56 24 chr2 8567334 8567744 -244688839 + L1ME4a LINE L1 5699 6121 0 215 315 33 22 chr2 8569984 8570076 -244686507 - MIR SINE MIR -82 180 88 368 210 217 7 chr2 8570303 8570446 -244686137 - MER5A DNA MER1_type -10 179 7 219 346 13 0 chr2 8570667 8570745 -244685838 + L2 LINE L2 3227 3305 -8 1764 192 32 24 chr2 8571040 8571451 -244685132 + MLT2D LTR ERVL 1 414 0 210 233 0 0 chr2 8571802 8571862 -244684721 + GA-rich Low_complexity Low_complexity 2 61 0 307 70 0 0 chr2 8574017 8574060 -244682523 - AluSp/q SINE Alu -8 295 253 193 286 223 0 chr2 8574512 8574624 -244681959 + L2 LINE L2 3136 3272 0 286 250 0 0 chr2 8574821 8574881 -244681702 + L2 LINE L2 2999 3058 -214 194 207 17 0 chr2 8575008 8575066 -244681517 + (CA)n Simple_repeat Simple_repeat 1 59 0 543 281 22 43 chr2 8575555 8575740 -244680843 + MIR SINE MIR 23 203 -59 315 241 139 0 chr2 8575850 8575958 -244680625 - MIR SINE MIR -70 192 70 279 235 113 17 chr2 8576737 8576852 -244679731 - MIR3 SINE MIR -78 130 5 429 242 32 20 chr2 8578564 8578909 -244677674 + (CA)n Simple_repeat Simple_repeat 1 349 0 367 274 0 11 chr2 8579204 8579299 -244677284 + MIR SINE MIR 58 151 -57 376 325 29 10 chr2 8579693 8579899 -244676684 - L1MC4a LINE L1 -1929 5879 5670 252 326 22 0 chr2 8580316 8580405 -244676178 + MIR SINE MIR 120 210 -52 289 190 122 54 chr2 8580981 8581111 -244675472 + MIR SINE MIR 48 140 -68 392 274 46 4 chr2 8582572 8582731 -244673852 - MIR3 SINE MIR 0 262 51 423 239 8 51 chr2 8582742 8582859 -244673724 + L2 LINE L2 3201 3312 -1 279 308 46 39 chr2 8584507 8584637 -244671946 + MIR3 SINE MIR 78 208 0 197 265 0 0 chr2 8585773 8585822 -244670761 - L2 LINE L2 -10 3262 3214 475 263 26 46 chr2 8587160 8587312 -244669271 + MIR SINE MIR 28 176 -86 605 259 7 0 chr2 8587388 8587523 -244669060 + MIR SINE MIR 16 151 -111 431 209 51 82 chr2 8587524 8587682 -244668901 + L1MB4 LINE L1 6022 6174 -6 340 232 11 11 chr2 8587673 8587768 -244668815 + L1MB8 LINE L1 6078 6172 -6 * 374 256 0 60 chr2 8587782 8587915 -244668668 + MIR SINE MIR 137 261 -1 375 320 46 34 chr2 8587928 8588030 -244668553 - MIR SINE MIR -60 202 96 2413 47 34 24 chr2 8588030 8588327 -244668256 - AluY SINE Alu -11 300 1 375 320 46 34 chr2 8588327 8588399 -244668184 - MIR SINE MIR -166 96 26 220 253 195 0 chr2 8590466 8590553 -244666030 - MIR SINE MIR -113 149 46 332 293 69 9 chr2 8590944 8591060 -244665523 - MIR SINE MIR -111 151 29 2370 97 7 0 chr2 8591666 8591964 -244664619 + AluSc SINE Alu 1 300 -9 189 192 14 27 chr2 8591998 8592071 -244664512 + (TA)n Simple_repeat Simple_repeat 1 72 0 242 137 59 0 chr2 8592085 8592136 -244664447 + G-rich Low_complexity Low_complexity 3 56 0 769 97 0 82 chr2 8592137 8592333 -244664250 + (GGGGA)n Simple_repeat Simple_repeat 1 180 0 378 123 66 8 chr2 8592443 8592565 -244664018 + (TG)n Simple_repeat Simple_repeat 1 129 0 203 149 0 21 chr2 8592619 8592666 -244663917 + (TG)n Simple_repeat Simple_repeat 1 46 0 198 278 175 0 chr2 8593067 8593164 -244663419 + MIR SINE MIR 15 128 -134 2345 114 0 0 chr2 8593621 8593927 -244662656 + AluSx SINE Alu 1 306 -6 482 319 61 24 chr2 8596304 8596510 -244660073 + L1ME4a LINE L1 5516 5740 -381 2464 96 27 0 chr2 8596510 8596875 -244659708 + L1PA8 LINE L1 5798 6172 0 482 319 61 24 chr2 8596875 8596997 -244659586 + L1ME4a LINE L1 5740 5856 -265 408 250 92 0 chr2 8597237 8597433 -244659150 + L1ME4a LINE L1 5728 5941 -180 24 67 0 0 chr2 8597433 8597478 -244659105 + AT_rich Low_complexity Low_complexity 1 45 0 1901 186 38 39 chr2 8597547 8598152 -244658431 + L1MB7 LINE L1 5015 5674 -510 2230 191 23 29 chr2 8598603 8598690 -244657893 + L1MB7 LINE L1 5652 5738 -446 2091 133 3 7 chr2 8598690 8598999 -244657584 + AluSx SINE Alu 1 308 -4 2230 191 23 29 chr2 8598999 8599428 -244657155 + L1MB7 LINE L1 5738 6165 -19 5509 147 78 31 chr2 8599451 8599783 -244656800 + Tigger3b DNA MER2_type 1 316 -2712 2368 94 0 0 chr2 8599783 8600082 -244656501 - AluSx SINE Alu -13 299 1 5509 147 78 31 chr2 8600082 8600592 -244655991 + Tigger3b DNA MER2_type 316 917 -2111 236 30 30 0 chr2 8600592 8600625 -244655958 + (CTCA)n Simple_repeat Simple_repeat 1 34 0 5509 147 78 31 chr2 8600625 8600955 -244655628 + Tigger3b DNA MER2_type 917 1230 -1 271 352 28 28 chr2 8601918 8602063 -244654520 - L3 LINE CR1 -198 1379 1235 270 276 60 17 chr2 8602555 8602671 -244653912 + MIR3 SINE MIR 58 178 -30 278 311 73 34 chr2 8603814 8603926 -244652657 - MIR SINE MIR -57 205 82 1157 254 88 31 chr2 8603926 8604280 -244652303 - MLT1A2 LTR MaLR 0 374 1 278 311 73 34 chr2 8604280 8604344 -244652239 - MIR SINE MIR -180 82 22 395 36 36 0 chr2 8604345 8604401 -244652182 + (CTACT)n Simple_repeat Simple_repeat 4 61 0 187 339 71 24 chr2 8605760 8605887 -244650696 - MIR SINE MIR -27 235 103 2610 113 6 6 chr2 8605896 8606260 -244650323 - THE1B LTR MaLR 0 364 1 250 307 39 31 chr2 8607095 8607222 -244649361 - MIR3 SINE MIR -16 192 65 1810 189 16 18 chr2 8607251 8607429 -244649154 + MLT1B LTR MaLR 1 178 -212 1627 192 0 26 chr2 8607429 8607741 -244648842 + AluJb SINE Alu 1 304 -8 1810 189 16 18 chr2 8607741 8607943 -244648640 + MLT1B LTR MaLR 178 380 -10 2172 109 0 7 chr2 8608357 8608659 -244647924 - AluSq SINE Alu -13 300 1 542 292 120 5 chr2 8608849 8609058 -244647525 + MIR SINE MIR 5 237 -25 559 266 67 37 chr2 8609648 8609974 -244646609 + MLT1J2 LTR MaLR 64 403 -6 184 219 205 26 chr2 8610312 8610463 -244646120 - L2 LINE L2 -1224 2090 1913 283 342 37 62 chr2 8613113 8613214 -244643369 + HAL1 LINE L1 8 110 -2397 779 228 59 30 chr2 8613214 8613416 -244643167 - MER3 DNA MER1_type -1 208 1 283 342 37 62 chr2 8613416 8613557 -244643026 + HAL1 LINE L1 110 244 -2263 299 312 23 69 chr2 8613560 8613733 -244642850 - MER115 DNA AcHobo -4 689 525 1205 216 24 80 chr2 8613735 8614147 -244642436 - MLT1B LTR MaLR 0 390 2 1055 251 129 34 chr2 8614149 8614528 -244642055 - MER115 DNA AcHobo -168 525 111 229 341 12 0 chr2 8614593 8614678 -244641905 + HAL1 LINE L1 235 320 -2187 1946 267 66 22 chr2 8614708 8615292 -244641291 + HAL1 LINE L1 418 974 -1533 252 0 0 0 chr2 8615292 8615320 -244641263 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1946 267 66 22 chr2 8615320 8615964 -244640619 + HAL1 LINE L1 974 1739 -768 447 35 0 0 chr2 8616050 8616107 -244640476 + (TG)n Simple_repeat Simple_repeat 2 58 0 287 167 0 0 chr2 8616121 8616163 -244640420 - MER41A-int LTR ERV1 -5904 42 1 962 105 13 7 chr2 8616163 8616316 -244640267 - MER41A LTR ERV1 0 554 401 1741 108 105 21 chr2 8616853 8617139 -244639444 + AluSx SINE Alu 3 312 0 208 369 35 35 chr2 8617371 8617512 -244639071 - MIR3 SINE MIR -16 192 52 289 250 117 17 chr2 8617640 8617760 -244638823 + L2 LINE L2 1303 1434 -1880 321 47 0 0 chr2 8617966 8618009 -244638574 + (CA)n Simple_repeat Simple_repeat 2 44 0 324 261 82 89 chr2 8618515 8618795 -244637788 + L2 LINE L2 2839 3116 -156 337 282 85 82 chr2 8620463 8620757 -244635826 - L2 LINE L2 -108 3205 2911 274 209 14 0 chr2 8621847 8621986 -244634597 + (TG)n Simple_repeat Simple_repeat 1 141 0 319 165 0 21 chr2 8622053 8622150 -244634433 + (TG)n Simple_repeat Simple_repeat 1 95 0 237 65 0 0 chr2 8622151 8622182 -244634401 + (GGGAGA)n Simple_repeat Simple_repeat 3 33 0 914 160 0 41 chr2 8624042 8624211 -244632372 + AluJb SINE Alu 135 296 -16 448 292 39 28 chr2 8624742 8624897 -244631686 + MIR SINE MIR 15 171 -57 1107 160 62 29 chr2 8627116 8627462 -244629121 - MLT1D LTR MaLR -103 402 1 280 261 23 11 chr2 8628565 8628653 -244627930 + MIR SINE MIR 58 146 -116 1530 218 92 23 chr2 8629870 8630306 -244626277 - MLT1C LTR MaLR 0 467 2 1826 160 7 0 chr2 8630549 8630842 -244625741 - AluJo SINE Alu -17 295 1 26 64 0 0 chr2 8630902 8630949 -244625634 + AT_rich Low_complexity Low_complexity 1 47 0 395 301 40 23 chr2 8631067 8631281 -244625302 + MIR SINE MIR 5 228 -34 226 116 58 35 chr2 8632788 8632874 -244623709 + (TATAA)n Simple_repeat Simple_repeat 5 92 0 436 213 24 6 chr2 8632893 8633062 -244623521 + GA-rich Low_complexity Low_complexity 1 172 0 1332 155 24 0 chr2 8635933 8636146 -244620437 + MER20 DNA MER1_type 1 218 -1 514 138 0 0 chr2 8638989 8639069 -244617514 - MLT2B2 LTR ERVL -435 80 1 336 247 21 21 chr2 8639327 8639420 -244617163 + MER115 DNA AcHobo 7 99 -594 1831 184 49 16 chr2 8639439 8639808 -244616775 + MLT1B LTR MaLR 2 382 -8 546 293 105 16 chr2 8639825 8640129 -244616454 + MER115 DNA AcHobo 125 455 -238 22 0 0 0 chr2 8640664 8640686 -244615897 + GC_rich Low_complexity Low_complexity 1 22 0 959 217 27 5 chr2 8641100 8641321 -244615262 + MER52C-int LTR ERV1 2501 2726 -2491 685 201 28 14 chr2 8641367 8641511 -244615072 + MER52C-int LTR ERV1 4545 4690 -1256 293 119 0 0 chr2 8641516 8641558 -244615025 + MER52C-int LTR ERV1 5976 6017 -1188 457 107 57 4 chr2 8641562 8641700 -244614883 + MER52C-int LTR ERV1 6892 7091 0 3660 190 170 18 chr2 8642243 8643174 -244613409 + MER52C LTR ERV1 49 1278 0 254 260 110 0 chr2 8643624 8643724 -244612859 + MLT1H1 LTR MaLR 30 140 -415 198 150 0 0 chr2 8644303 8644343 -244612240 + (TA)n Simple_repeat Simple_repeat 2 41 0 311 276 45 70 chr2 8644345 8644501 -244612082 + L1MCa LINE L1 1922 2073 -4353 * 329 287 25 57 chr2 8644491 8644613 -244611970 + L1MC4 LINE L1 6586 6703 -1339 323 261 23 23 chr2 8644615 8644703 -244611880 + L1MCa LINE L1 1980 2067 -4359 186 200 42 21 chr2 8644703 8644798 -244611785 + (TA)n Simple_repeat Simple_repeat 1 97 0 330 318 24 0 chr2 8644803 8644888 -244611695 - L1MC4 LINE L1 -1340 6702 6616 308 315 0 22 chr2 8644921 8645013 -244611570 + L1MC4 LINE L1 6614 6703 -1339 220 221 16 49 chr2 8645013 8645135 -244611448 + (TATATG)n Simple_repeat Simple_repeat 6 123 0 308 296 48 64 chr2 8645135 8645260 -244611323 - L1MC4 LINE L1 -1339 6703 6581 216 0 0 0 chr2 8645290 8645314 -244611269 + (CA)n Simple_repeat Simple_repeat 1 24 0 647 184 16 68 chr2 8646384 8646528 -244610055 + MER96B DNA MER1_type? 1 134 -283 2990 115 29 2 chr2 8646528 8646972 -244609611 + L1PA16 LINE L1 5708 6163 -3 647 184 16 68 chr2 8646972 8647017 -244609566 + MER96B DNA MER1_type? 134 180 -237 1735 175 52 50 chr2 8647125 8647337 -244609246 - MSTB1 LTR MaLR 0 432 217 1850 168 3 0 chr2 8647337 8647647 -244608936 + AluJb SINE Alu 2 312 0 1735 175 52 50 chr2 8647647 8647834 -244608749 - MSTB1 LTR MaLR -215 217 32 197 275 12 117 chr2 8649450 8649621 -244606962 + MIR SINE MIR 110 262 0 1679 176 14 3 chr2 8649669 8649959 -244606624 + AluJo SINE Alu 1 293 -19 186 258 113 41 chr2 8650278 8650375 -244606208 - L3 LINE CR1 -106 1471 1368 1657 145 7 56 chr2 8651733 8652036 -244604547 + AluJo SINE Alu 1 288 -24 232 221 81 23 chr2 8652177 8652263 -244604320 - L2 LINE L2 0 3272 3182 207 69 0 0 chr2 8652312 8652341 -244604242 + (CCCCCA)n Simple_repeat Simple_repeat 4 32 0 682 197 55 0 chr2 8653648 8653775 -244602808 + FRAM SINE Alu 21 154 -22 205 352 63 0 chr2 8654868 8655010 -244601573 - MER5A DNA MER1_type -14 175 25 249 306 107 68 chr2 8655100 8655437 -244601146 - L2 LINE L2 -95 3177 2828 2412 82 0 0 chr2 8655766 8656058 -244600525 - AluSg SINE Alu -18 292 1 980 144 0 0 chr2 8657278 8657424 -244599159 - AluSg/x SINE Alu -8 302 157 243 296 12 25 chr2 8658369 8658450 -244598133 - MER5A DNA MER1_type 0 189 110 182 259 12 49 chr2 8658396 8658451 -244598132 + MER5A DNA MER1_type 40 93 -96 * 2149 117 23 47 chr2 8658451 8658835 -244597748 - THE1C LTR MaLR 0 375 1 182 259 12 49 chr2 8658835 8658860 -244597723 + MER5A DNA MER1_type 93 117 -72 221 291 46 106 chr2 8658866 8659017 -244597566 - MER5A DNA MER1_type -1 188 47 915 161 0 13 chr2 8659570 8659725 -244596858 + FRAM SINE Alu 24 176 0 2390 69 0 23 chr2 8660037 8660342 -244596241 + AluY SINE Alu 1 298 -13 1596 115 28 45 chr2 8660621 8660864 -244595719 + L1MB3 LINE L1 5892 6138 -45 1788 101 97 4 chr2 8660864 8661122 -244595461 + AluSg SINE Alu 1 282 -28 279 0 0 0 chr2 8661122 8661153 -244595430 + (CA)n Simple_repeat Simple_repeat 2 32 0 1596 115 28 45 chr2 8661153 8661196 -244595387 + L1MB3 LINE L1 6136 6174 -9 434 289 106 41 chr2 8661975 8662445 -244594138 - L1ME3A LINE L1 -217 5953 5450 1157 298 73 28 chr2 8662542 8663009 -244593574 + L2 LINE L2 2826 3313 0 1050 167 5 5 chr2 8663012 8663677 -244592906 + (TGGA)n Simple_repeat Simple_repeat 1 665 0 496 183 17 26 chr2 8664404 8664519 -244592064 + MLT1J1 LTR MaLR 7 120 -326 795 148 11 82 chr2 8664520 8664703 -244591880 + MER20 DNA MER1_type 1 170 -49 507 295 122 24 chr2 8664819 8665114 -244591469 + MLT1J2 LTR MaLR 113 436 -14 260 190 110 70 chr2 8665612 8665712 -244590871 - MER53 DNA DNA -84 105 2 357 273 123 27 chr2 8665714 8665901 -244590682 - MIR SINE MIR -13 249 45 283 376 23 23 chr2 8666241 8666414 -244590169 + MIR SINE MIR 18 190 -72 2003 145 16 10 chr2 8667317 8667448 -244589135 + AluJb SINE Alu 1 130 -182 1903 158 14 3 chr2 8667448 8667740 -244588843 + AluJb SINE Alu 1 295 -17 2003 145 16 10 chr2 8667740 8667911 -244588672 + AluJb SINE Alu 130 305 -7 298 249 107 47 chr2 8668223 8668392 -244588191 - MLT1G LTR MaLR -196 394 216 4057 187 83 71 chr2 8668394 8669940 -244586643 + L1MDa LINE L1 324 2126 -4414 1694 125 21 127 chr2 8669972 8670349 -244586234 + MER1B DNA MER1_type 1 337 0 482 249 71 24 chr2 8670466 8670635 -244585948 + MER5A DNA MER1_type 7 183 -6 232 309 0 64 chr2 8673706 8673816 -244582767 + C-rich Low_complexity Low_complexity 3 105 0 267 31 0 0 chr2 8674070 8674102 -244582481 + (CCG)n Simple_repeat Simple_repeat 2 33 0 399 297 0 14 chr2 8676737 8676882 -244579701 + C-rich Low_complexity Low_complexity 2 144 0 225 0 0 0 chr2 8677834 8677859 -244578724 + (A)n Simple_repeat Simple_repeat 1 25 0 23 0 0 0 chr2 8679190 8679213 -244577370 + AT_rich Low_complexity Low_complexity 1 23 0 460 275 66 42 chr2 8681477 8681931 -244574652 - L1M4 LINE L1 -2043 4103 3639 2033 121 29 0 chr2 8682402 8682682 -244573901 + AluJb SINE Alu 1 288 -24 26 30 0 0 chr2 8682683 8682716 -244573867 + AT_rich Low_complexity Low_complexity 1 33 0 1434 308 67 40 chr2 8682801 8683780 -244572803 + L1MEd LINE L1 112 1117 -5002 1891 134 10 23 chr2 8683914 8684213 -244572370 - AluJb SINE Alu -17 295 1 1829 277 71 13 chr2 8684225 8684973 -244571610 + L1MC4a LINE L1 5279 6069 -1739 1775 143 3 28 chr2 8685113 8685399 -244571184 + AluSx SINE Alu 1 279 -33 326 281 45 0 chr2 8685414 8685503 -244571080 - L1MC5 LINE L1 -861 7100 7008 862 290 86 28 chr2 8685601 8686145 -244570438 + L1MC4a LINE L1 6199 6774 -1034 309 259 46 15 chr2 8686173 8686304 -244570279 + L1MC5 LINE L1 6957 7091 -870 311 319 91 55 chr2 8686537 8686844 -244569739 + L1MC5 LINE L1 7249 7566 -395 243 0 0 0 chr2 8686858 8686885 -244569698 + (T)n Simple_repeat Simple_repeat 1 27 0 255 239 11 54 chr2 8686964 8687056 -244569527 + L1MC5 LINE L1 7711 7798 -163 368 309 95 8 chr2 8688216 8688342 -244568241 - L2 LINE L2 0 3272 3136 355 237 200 4 chr2 8688722 8688967 -244567616 + LTR50 LTR ERVL 502 794 -1 405 300 0 0 chr2 8689108 8689268 -244567315 + G-rich Low_complexity Low_complexity 1 160 0 315 142 122 0 chr2 8689369 8689517 -244567066 + (GGATG)n Simple_repeat Simple_repeat 2 167 0 311 164 41 0 chr2 8689520 8689593 -244566990 + GA-rich Low_complexity Low_complexity 1 76 0 2042 138 0 0 chr2 8690071 8690388 -244566195 + AluSx SINE Alu 1 317 0 639 301 109 12 chr2 8690711 8691040 -244565543 - L1MC/D LINE L1 -2073 5735 5375 222 62 0 0 chr2 8691054 8691086 -244565497 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 251 237 30 69 chr2 8691535 8691666 -244564917 - L1MC4a LINE L1 -1634 6174 6049 794 197 72 0 chr2 8691716 8691868 -244564715 + AluJb SINE Alu 136 298 -14 214 304 124 19 chr2 8692020 8692181 -244564402 + L3 LINE CR1 1320 1497 -80 1608 108 0 0 chr2 8692825 8693028 -244563555 + AluSx SINE Alu 1 203 -109 1026 172 10 25 chr2 8693029 8693233 -244563350 + MLT1B LTR MaLR 189 389 -1 237 65 0 0 chr2 8693396 8693427 -244563156 + (CA)n Simple_repeat Simple_repeat 1 31 0 22 56 0 0 chr2 8694284 8694320 -244562263 + AT_rich Low_complexity Low_complexity 1 36 0 328 104 30 0 chr2 8696259 8696326 -244560257 + (TG)n Simple_repeat Simple_repeat 1 69 0 328 128 46 18 chr2 8696373 8696482 -244560101 + (TG)n Simple_repeat Simple_repeat 1 112 0 436 122 68 7 chr2 8696509 8696656 -244559927 + (TG)n Simple_repeat Simple_repeat 1 156 0 349 307 55 24 chr2 8696856 8696983 -244559600 - L2 LINE L2 -474 2840 2710 532 113 0 0 chr2 8697178 8697258 -244559325 + MADE1 DNA Mariner 1 80 0 2017 113 72 0 chr2 8697668 8697959 -244558624 - AluSx SINE Alu 0 312 1 2421 97 3 0 chr2 8698239 8698547 -244558036 + AluSp SINE Alu 1 309 -4 1795 148 56 14 chr2 8698615 8698899 -244557684 + AluJb SINE Alu 1 296 -16 1640 223 122 26 chr2 8699557 8700018 -244556565 + MLT1D LTR MaLR 1 505 0 1470 207 122 3 chr2 8700440 8700595 -244555988 - MSTD LTR MaLR -2 394 259 2233 113 159 5 chr2 8700595 8700966 -244555617 + MSTA LTR MaLR 1 428 0 1470 207 122 3 chr2 8700966 8701162 -244555421 - MSTD LTR MaLR -137 259 1 365 283 30 0 chr2 8701195 8701294 -244555289 + L2 LINE L2 3212 3313 0 282 316 29 76 chr2 8701294 8701465 -244555118 + L3 LINE CR1 1404 1566 -11 450 0 0 0 chr2 8701900 8701950 -244554633 + (TG)n Simple_repeat Simple_repeat 2 51 0 578 129 0 86 chr2 8701964 8702080 -244554503 - AluJ SINE Alu 0 312 207 997 136 0 7 chr2 8702080 8702220 -244554363 - AluJ SINE Alu -169 143 5 395 174 250 45 chr2 8702229 8702361 -244554222 - MLT1F LTR MaLR -383 159 1 216 176 44 0 chr2 8702980 8703048 -244553535 + (TTATA)n Simple_repeat Simple_repeat 5 75 0 2298 53 0 0 chr2 8703141 8703406 -244553177 - AluY SINE Alu -16 295 31 361 271 68 23 chr2 8704849 8704980 -244551603 + MLT1G3 LTR MaLR 26 162 -433 1583 148 5 77 chr2 8704980 8705352 -244551231 - MER4A LTR ERV1 0 664 261 634 128 20 10 chr2 8705349 8705451 -244551132 - MER4A LTR ERV1 -561 103 1 * 521 260 83 76 chr2 8705463 8705881 -244550702 + MLT1G3 LTR MaLR 92 560 -7 2161 204 99 159 chr2 8705929 8706006 -244550577 - Charlie2a DNA MER1_type -6 2856 2776 5335 84 0 15 chr2 8706006 8706676 -244549907 - PABL_A LTR ERV1 0 660 1 2161 204 99 159 chr2 8706676 8707878 -244548705 - Charlie2a DNA MER1_type -86 2776 1673 2037 122 6 34 chr2 8707878 8708198 -244548385 + AluSx SINE Alu 1 311 -1 2161 204 99 159 chr2 8708198 8708375 -244548208 - Charlie2a DNA MER1_type -1189 1673 1487 430 264 227 5 chr2 8708498 8708714 -244547869 - Charlie2a DNA MER1_type -2239 623 360 886 303 130 35 chr2 8709135 8709963 -244546620 - HAL1 LINE L1 0 2507 1601 2533 171 11 18 chr2 8709982 8710437 -244546146 + LOR1b LTR ERV1 10 461 0 2147 252 65 70 chr2 8710439 8710557 -244546026 - HAL1 LINE L1 -916 1591 1474 2111 123 0 3 chr2 8710557 8710872 -244545711 - AluSx SINE Alu 0 314 1 2147 252 65 70 chr2 8710872 8711817 -244544766 - HAL1 LINE L1 -1033 1474 532 342 293 77 90 chr2 8711862 8712241 -244544342 - HAL1 LINE L1 -2044 463 90 463 256 76 33 chr2 8715022 8715233 -244541350 + L1ME3A LINE L1 5727 5946 -224 2425 65 3 0 chr2 8715248 8715539 -244541044 + AluSg SINE Alu 5 296 -14 2497 116 42 11 chr2 8715598 8715951 -244540632 + THE1B LTR MaLR 1 364 0 2118 105 0 36 chr2 8716007 8716311 -244540272 - AluSx SINE Alu -19 293 1 1433 244 31 0 chr2 8716398 8716758 -244539825 - ERVL LTR ERVL -4525 1239 869 1298 241 26 42 chr2 8716854 8717278 -244539305 - MLT2B1 LTR ERVL -103 417 1 1758 156 42 10 chr2 8717363 8717652 -244538931 + AluJo SINE Alu 1 298 -14 23 54 0 0 chr2 8718051 8718088 -244538495 + AT_rich Low_complexity Low_complexity 1 37 0 2779 101 11 16 chr2 8718317 8718694 -244537889 + THE1C LTR MaLR 1 375 0 1014 224 68 87 chr2 8719183 8719598 -244536985 - L1M4 LINE L1 -1022 5124 4718 36 40 0 0 chr2 8719699 8719749 -244536834 + AT_rich Low_complexity Low_complexity 1 50 0 285 239 23 23 chr2 8719846 8719934 -244536649 + L2 LINE L2 1468 1555 -1759 2628 170 19 46 chr2 8720012 8720496 -244536087 + MLT2B2 LTR ERVL 1 472 -43 201 74 0 0 chr2 8720496 8720523 -244536060 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 2628 170 19 46 chr2 8720523 8720555 -244536028 + MLT2B2 LTR ERVL 472 503 -12 21 57 0 0 chr2 8720646 8720681 -244535902 + AT_rich Low_complexity Low_complexity 1 35 0 1730 168 0 14 chr2 8720687 8720978 -244535605 - AluJo SINE Alu -15 297 11 1171 123 12 0 chr2 8721741 8721911 -244534672 + AluSg/x SINE Alu 135 306 -4 351 44 0 0 chr2 8722616 8722661 -244533922 + (CA)n Simple_repeat Simple_repeat 2 46 0 260 321 87 38 chr2 8723033 8723217 -244533366 + MIR SINE MIR 14 206 -56 * 543 291 35 0 chr2 8723216 8723357 -244533226 + MIR SINE MIR 97 242 -20 24 53 0 0 chr2 8723556 8723594 -244532989 + AT_rich Low_complexity Low_complexity 1 38 0 225 65 0 0 chr2 8724007 8724038 -244532545 + (ATG)n Simple_repeat Simple_repeat 2 32 0 832 221 106 10 chr2 8724131 8724339 -244532244 + MIR SINE MIR 17 244 -18 334 252 92 25 chr2 8724582 8724701 -244531882 - MER104 DNA Tc2 -49 131 5 22 0 0 0 chr2 8725031 8725053 -244531530 + AT_rich Low_complexity Low_complexity 1 22 0 560 194 0 37 chr2 8725175 8725283 -244531300 + FRAM SINE Alu 38 141 -35 351 195 172 94 chr2 8725527 8725783 -244530800 + MLT1J2 LTR MaLR 2 277 -173 295 248 77 3 chr2 8725831 8725930 -244530653 + MLT1J2 LTR MaLR 345 444 -2 923 131 0 8 chr2 8726377 8726507 -244530076 - FLAM_A SINE Alu -4 129 1 2092 119 3 0 chr2 8726686 8726971 -244529612 - AluSx SINE Alu -24 288 3 1873 161 0 17 chr2 8727059 8727357 -244529226 - AluJb SINE Alu -19 293 1 1695 192 77 0 chr2 8728957 8729280 -244527303 - MER7A DNA MER2_type 0 346 1 1645 132 73 11 chr2 8730486 8730790 -244525793 + AluJo SINE Alu 1 312 0 21 0 0 0 chr2 8734420 8734441 -244522142 + AT_rich Low_complexity Low_complexity 1 21 0 800 197 8 0 chr2 8734689 8734821 -244521762 - FLAM_A SINE Alu 0 133 1 246 255 88 74 chr2 8735550 8735766 -244520817 + L2 LINE L2 3030 3248 -65 1134 192 148 36 chr2 8736441 8736800 -244519783 - MER31B LTR ERV1 -43 423 25 24 32 0 0 chr2 8736940 8736971 -244519612 + AT_rich Low_complexity Low_complexity 1 31 0 2177 121 0 3 chr2 8737675 8737982 -244518601 + AluSx SINE Alu 1 306 -6 483 145 38 0 chr2 8740319 8740415 -244516168 - L1MB8 LINE L1 -275 5899 5798 3564 206 75 11 chr2 8740520 8741374 -244515209 + L1MC4a LINE L1 6900 7808 0 1946 128 6 55 chr2 8743711 8744039 -244512544 + AluSx SINE Alu 1 312 0 1064 181 108 23 chr2 8744554 8744814 -244511769 - AluJo SINE Alu -20 292 11 310 239 163 0 chr2 8745154 8745246 -244511337 + L2 LINE L2 3203 3309 -4 238 247 161 0 chr2 8745880 8745973 -244510610 - MIR SINE MIR -76 186 79 217 195 35 23 chr2 8746479 8746566 -244510017 + (TTATA)n Simple_repeat Simple_repeat 5 92 0 1071 269 143 18 chr2 8747327 8747725 -244508858 - L2 LINE L2 -18 3295 2848 3373 135 67 24 chr2 8748068 8748653 -244507930 + MER4B LTR ERV1 1 610 0 459 33 33 0 chr2 8749663 8749723 -244506860 + AluY SINE Alu 2 63 -250 24 32 0 0 chr2 8749824 8749855 -244506728 + AT_rich Low_complexity Low_complexity 1 31 0 264 319 61 25 chr2 8751067 8751230 -244505353 + L2 LINE L2 2905 3073 -240 1778 286 161 21 chr2 8751544 8752572 -244504011 + L2 LINE L2 191 1362 -1952 278 271 84 60 chr2 8753611 8753862 -244502721 - L2 LINE L2 -920 2394 2138 254 309 40 46 chr2 8753862 8754014 -244502569 + L2 LINE L2 3132 3282 -31 182 233 209 23 chr2 8754045 8754174 -244502409 - L2 LINE L2 -1232 2082 1930 220 186 0 93 chr2 8754304 8754401 -244502182 + GA-rich Low_complexity Low_complexity 5 92 0 2288 92 17 0 chr2 8755775 8756067 -244500516 + AluSx SINE Alu 1 297 -15 316 180 0 0 chr2 8756591 8756652 -244499931 - L1ME4a LINE L1 -1 6120 6060 21 0 0 0 chr2 8756703 8756724 -244499859 + AT_rich Low_complexity Low_complexity 1 21 0 2101 141 0 0 chr2 8756724 8757030 -244499553 + AluSx SINE Alu 1 306 -6 1100 169 0 0 chr2 8757561 8757744 -244498839 - AluJb SINE Alu -10 302 120 410 289 86 119 chr2 8758055 8759029 -244497554 + L2 LINE L2 880 1821 -1493 2098 104 0 0 chr2 8759062 8759367 -244497216 + AluSx SINE Alu 5 309 0 209 262 12 83 chr2 8759391 8759475 -244497108 + L2 LINE L2 1938 2015 -1299 892 226 34 26 chr2 8759485 8759719 -244496864 + MER106A DNA MER1_type 1 236 0 490 265 149 16 chr2 8759721 8760042 -244496541 - L1MC5 LINE L1 -99 7862 7499 1671 121 148 4 chr2 8760360 8760616 -244495967 - AluJb SINE Alu -5 297 5 495 353 154 12 chr2 8760695 8761299 -244495284 + L2 LINE L2 2167 2856 -458 344 348 167 30 chr2 8761328 8761633 -244494950 + L2 LINE L2 2926 3272 0 2136 86 17 7 chr2 8763295 8763585 -244492998 + AluSq SINE Alu 1 293 -20 352 43 0 0 chr2 8763769 8763816 -244492767 - AluY SINE Alu -3 298 252 2365 86 0 10 chr2 8763882 8764184 -244492399 - AluSq SINE Alu -14 299 1 231 133 0 0 chr2 8764223 8764268 -244492315 + (T)n Simple_repeat Simple_repeat 1 45 0 198 0 0 0 chr2 8764297 8764319 -244492264 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 21 0 0 0 chr2 8765621 8765642 -244490941 + AT_rich Low_complexity Low_complexity 1 21 0 188 132 151 38 chr2 8766073 8766126 -244490457 - MIR SINE MIR -24 238 180 1315 172 0 5 chr2 8767199 8767420 -244489163 + AluJb SINE Alu 85 304 -8 447 290 189 64 chr2 8768542 8768793 -244487790 - L2 LINE L2 -337 2977 2759 1902 124 57 0 chr2 8768793 8769076 -244487507 - AluJb SINE Alu -13 299 1 447 290 189 64 chr2 8769076 8769824 -244486759 - L2 LINE L2 -555 2759 1853 25 0 0 0 chr2 8773078 8773103 -244483480 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr2 8773916 8773939 -244482644 + AT_rich Low_complexity Low_complexity 1 23 0 208 379 32 0 chr2 8774439 8774534 -244482049 - MIR SINE MIR -69 139 42 252 0 0 0 chr2 8775458 8775486 -244481097 + (CA)n Simple_repeat Simple_repeat 2 29 0 966 108 0 0 chr2 8775692 8775822 -244480761 - AluSg/x SINE Alu -4 306 177 284 327 9 47 chr2 8775884 8775991 -244480592 - MIR SINE MIR -82 126 24 21 0 0 0 chr2 8778064 8778085 -244478498 + AT_rich Low_complexity Low_complexity 1 21 0 2245 80 0 30 chr2 8778090 8778389 -244478194 + AluSg1 SINE Alu 1 290 -19 379 186 46 56 chr2 8779011 8779134 -244477449 + L1ME LINE L1 5479 5595 -571 230 248 113 68 chr2 8779142 8779275 -244477308 + L1MC4 LINE L1 7903 8041 -1 21 0 0 0 chr2 8781231 8781252 -244475331 + AT_rich Low_complexity Low_complexity 1 21 0 1470 163 21 21 chr2 8782677 8782959 -244473624 - AluJo SINE Alu -30 282 1 1826 143 17 24 chr2 8784615 8784909 -244471674 - AluJb SINE Alu -20 292 1 1692 163 0 14 chr2 8785918 8786194 -244470389 - AluJo SINE Alu -40 272 1 245 339 46 9 chr2 8786387 8786496 -244470087 + L2 LINE L2 3190 3302 -11 21 36 0 0 chr2 8786513 8786541 -244470042 + AT_rich Low_complexity Low_complexity 1 28 0 545 306 75 0 chr2 8788354 8788540 -244468043 + MLT1J LTR MaLR 3 202 -309 518 269 35 29 chr2 8788531 8788702 -244467881 + MLT1J LTR MaLR 340 511 0 * 28 0 0 0 chr2 8788879 8788907 -244467676 + AT_rich Low_complexity Low_complexity 1 28 0 214 292 112 50 chr2 8789100 8789261 -244467322 - MIR SINE MIR -46 216 46 819 266 71 9 chr2 8789864 8790090 -244466493 + MIR SINE MIR 23 262 0 244 200 29 29 chr2 8790280 8790350 -244466233 + GA-rich Low_complexity Low_complexity 4 73 0 778 278 158 11 chr2 8791126 8791627 -244464956 - L2 LINE L2 0 3313 2734 25 31 0 0 chr2 8792938 8792970 -244463613 + AT_rich Low_complexity Low_complexity 1 32 0 437 261 69 0 chr2 8793283 8793413 -244463170 - L2 LINE L2 -15 3298 3160 433 282 115 6 chr2 8793452 8793626 -244462957 + L1ME LINE L1 5586 5778 -343 1641 112 0 60 chr2 8793706 8793956 -244462627 + AluSq SINE Alu 1 235 -78 225 0 0 0 chr2 8793963 8793988 -244462595 + (A)n Simple_repeat Simple_repeat 1 25 0 304 155 0 71 chr2 8794027 8794111 -244462472 + L1ME4a LINE L1 6044 6121 0 238 301 48 10 chr2 8794376 8794479 -244462104 - L1MEd LINE L1 -5996 123 17 3237 136 39 0 chr2 8794758 8795274 -244461309 + Tigger4(Zombi) DNA MER2_type 2196 2731 0 3010 182 56 2 chr2 8795658 8796191 -244460392 + MER68 LTR ERV1 1 562 0 848 67 55 0 chr2 8797356 8797487 -244459096 - LTR12 LTR ERV1 -21 693 270 5022 107 44 92 chr2 8797488 8798465 -244458118 - pTR5 LTR ERV1 -1 2605 1520 3411 95 4 32 chr2 8798462 8798679 -244457904 - HERV9 LTR ERV1 -164 8235 8013 * 2523 62 0 7 chr2 8798679 8798983 -244457600 + AluY SINE Alu 1 302 -9 3411 95 4 32 chr2 8798983 8799259 -244457324 - HERV9 LTR ERV1 -386 8013 7756 2159 182 154 50 chr2 8799253 8800051 -244456532 - HERV9 LTR ERV1 -5176 1720 840 * 30034 112 12 15 chr2 8800050 8805019 -244451564 - HERV9 LTR ERV1 -3212 5045 66 5170 80 50 134 chr2 8805019 8805974 -244450609 - pTR5 LTR ERV1 0 2606 1520 1929 133 32 19 chr2 8806689 8806997 -244449586 - AluSx SINE Alu 0 312 1 2133 143 3 0 chr2 8807027 8807334 -244449249 - AluJb SINE Alu -4 308 1 408 329 62 21 chr2 8807334 8807574 -244449009 - L1M4 LINE L1 -1599 4547 4298 1020 73 0 7 chr2 8808184 8808320 -244448263 + L1PA6 LINE L1 5799 5933 -221 207 114 0 0 chr2 8811180 8811215 -244445368 + (T)n Simple_repeat Simple_repeat 1 35 0 1736 112 4 0 chr2 8811701 8811933 -244444650 - AluSx SINE Alu -79 233 1 1554 194 18 3 chr2 8811959 8812243 -244444340 - AluJb SINE Alu -22 290 3 24 0 0 0 chr2 8812245 8812269 -244444314 + AT_rich Low_complexity Low_complexity 1 24 0 246 250 33 43 chr2 8812468 8812560 -244444023 - MIR SINE MIR -123 139 49 309 200 0 0 chr2 8812927 8812982 -244443601 - MER116 DNA Mariner -9 71 17 1167 241 43 26 chr2 8813068 8813512 -244443071 + L1ME1 LINE L1 5723 6332 -2 21 0 0 0 chr2 8813916 8813937 -244442646 + AT_rich Low_complexity Low_complexity 1 21 0 466 320 47 78 chr2 8815122 8815441 -244441142 + L2 LINE L2 2963 3271 -1 3668 219 58 12 chr2 8815555 8816423 -244440160 - L1M4 LINE L1 -1136 5010 4093 1584 196 38 35 chr2 8816423 8816796 -244439787 - MLT1A2 LTR MaLR 0 374 1 3668 219 58 12 chr2 8816796 8816877 -244439706 - L1M4 LINE L1 -2053 4093 4017 2313 101 0 0 chr2 8817786 8818092 -244438491 - AluSq SINE Alu -7 306 1 1043 230 4 4 chr2 8818402 8818680 -244437903 - L1M4 LINE L1 -2909 3237 2960 397 272 99 8 chr2 8819750 8819937 -244436646 - MIR SINE MIR -19 243 38 2509 67 0 6 chr2 8822385 8822697 -244433886 + AluY SINE Alu 1 310 -1 285 245 38 57 chr2 8823189 8823211 -244433372 + MIR SINE MIR 159 180 -82 1251 124 129 0 chr2 8823211 8823420 -244433163 - MER46A DNA MER2_type 0 236 1 285 245 38 57 chr2 8823420 8823503 -244433080 + MIR SINE MIR 180 262 0 209 220 40 0 chr2 8823511 8823561 -244433022 + L2 LINE L2 3261 3312 -1 3853 132 3 2 chr2 8823723 8824330 -244432253 + L1PB3 LINE L1 5545 6152 -2 198 267 173 40 chr2 8824514 8824589 -244431994 - L2 LINE L2 -6 3266 3182 195 342 127 50 chr2 8824721 8825084 -244431499 - L2 LINE L2 -1 3312 2922 980 199 6 0 chr2 8825626 8825797 -244430786 - FAM SINE Alu -3 172 1 875 271 104 56 chr2 8825840 8826579 -244430004 + L2 LINE L2 2545 3313 0 22 56 0 0 chr2 8827182 8827218 -244429365 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr2 8828790 8828812 -244427771 + AT_rich Low_complexity Low_complexity 1 22 0 1754 172 0 7 chr2 8830051 8830342 -244426241 + AluJo SINE Alu 1 289 -23 23 33 0 0 chr2 8830342 8830372 -244426211 + AT_rich Low_complexity Low_complexity 1 30 0 252 137 0 0 chr2 8831608 8831659 -244424924 + (TA)n Simple_repeat Simple_repeat 1 51 0 2136 121 7 0 chr2 8832123 8832421 -244424162 + AluSx SINE Alu 1 300 -12 723 195 0 8 chr2 8833424 8833547 -244423036 - FLAM_A SINE Alu -11 122 1 2818 3 0 0 chr2 8833696 8833998 -244422585 + AluYa5 SINE Alu 1 302 -9 777 223 42 0 chr2 8834461 8834654 -244421929 - MER20 DNA MER1_type -2 217 17 332 264 114 36 chr2 8834685 8834852 -244421731 - L2 LINE L2 -78 3235 3056 * 2612 291 128 31 chr2 8834847 8836509 -244420074 - L2 LINE L2 -448 2866 1043 2191 119 3 0 chr2 8837568 8837870 -244418713 - AluSx SINE Alu -9 303 1 350 287 144 23 chr2 8837874 8838048 -244418535 + L2 LINE L2 2823 3017 -296 3383 279 106 28 chr2 8838066 8838123 -244418460 - L2 LINE L2 -38 3275 3224 2216 94 30 0 chr2 8838123 8838422 -244418161 + AluSg SINE Alu 2 309 -1 3383 279 106 28 chr2 8838422 8838470 -244418113 - L2 LINE L2 -89 3224 3181 200 59 29 0 chr2 8838470 8838504 -244418079 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3383 279 106 28 chr2 8838504 8839918 -244416665 - L2 LINE L2 -132 3181 1637 381 257 46 28 chr2 8839987 8840096 -244416487 + L2 LINE L2 3203 3313 0 25 51 0 0 chr2 8840465 8840504 -244416079 + AT_rich Low_complexity Low_complexity 1 39 0 23 33 0 0 chr2 8840609 8840639 -244415944 + AT_rich Low_complexity Low_complexity 1 30 0 1588 174 18 21 chr2 8841415 8841697 -244414886 - AluJo SINE Alu -31 281 1 221 224 134 30 chr2 8842447 8842514 -244414069 + MER5B DNA MER1_type 2 75 -103 208 331 90 8 chr2 8844065 8844198 -244412385 - MIR SINE MIR -33 229 86 271 191 0 73 chr2 8844515 8844583 -244412000 + L1MC1 LINE L1 7 69 -6357 9188 198 63 29 chr2 8844583 8844604 -244411979 + L1MC1 LINE L1 2001 2020 -4593 352 51 34 0 chr2 8844604 8844663 -244411920 + (TG)n Simple_repeat Simple_repeat 2 62 0 9188 198 63 29 chr2 8844663 8845937 -244410646 + L1MC1 LINE L1 2020 3249 -3364 1917 145 30 3 chr2 8845937 8846241 -244410342 + AluJb SINE Alu 1 312 0 9188 198 63 29 chr2 8846241 8847009 -244409574 + L1MC1 LINE L1 3249 3989 -2624 2177 112 3 13 chr2 8847009 8847312 -244409271 + AluSq SINE Alu 1 300 -13 9188 198 63 29 chr2 8847312 8849680 -244406903 + L1MC1 LINE L1 3989 6593 -20 198 103 0 0 chr2 8849689 8849718 -244406865 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 1680 187 14 0 chr2 8851681 8851970 -244404613 - AluJb SINE Alu -19 293 1 275 240 264 8 chr2 8852373 8852502 -244404081 + MER103 DNA DNA 1 162 -4 2291 91 3 3 chr2 8852576 8852873 -244403710 - AluSq SINE Alu -16 297 1 24 0 0 0 chr2 8853474 8853498 -244403085 + AT_rich Low_complexity Low_complexity 1 24 0 2379 65 0 10 chr2 8853588 8853894 -244402689 - AluY SINE Alu -8 303 1 255 186 47 0 chr2 8855664 8855707 -244400876 + MER57A LTR ERV1 295 339 -64 615 173 43 81 chr2 8855773 8855958 -244400625 - MER104 DNA MER2_type -1 179 2 467 304 100 43 chr2 8856288 8856778 -244399805 + L1MC/D LINE L1 4859 5376 -770 231 139 47 0 chr2 8856778 8856821 -244399762 - U2 snRNA snRNA -143 45 1 614 252 145 16 chr2 8856845 8857087 -244399496 + L1MC/D LINE L1 5392 5664 -457 282 216 149 0 chr2 8857160 8857234 -244399349 + L1MC/D LINE L1 5678 5762 -2046 23 33 0 0 chr2 8857473 8857503 -244399080 + AT_rich Low_complexity Low_complexity 1 30 0 1615 155 53 8 chr2 8857530 8857794 -244398789 + AluJo SINE Alu 1 276 -36 1527 161 8 4 chr2 8857794 8858043 -244398540 - AluJo SINE Alu -62 250 1 433 198 10 30 chr2 8860720 8860821 -244395762 - AluJo SINE Alu -162 150 52 206 293 17 0 chr2 8861528 8861586 -244394997 + MIR SINE MIR 85 143 -65 923 183 6 23 chr2 8862188 8862363 -244394220 - FRAM SINE Alu -5 171 1 1125 321 130 19 chr2 8864386 8864549 -244392034 - L2 LINE L2 -37 3276 3132 1926 144 3 10 chr2 8864549 8864840 -244391743 + AluJb SINE Alu 1 289 -23 1125 321 130 19 chr2 8864840 8865584 -244390999 - L2 LINE L2 -181 3132 2251 722 197 8 0 chr2 8866654 8866781 -244389802 + FLAM_C SINE Alu 1 128 -5 25 65 0 0 chr2 8867542 8867588 -244388995 + AT_rich Low_complexity Low_complexity 1 46 0 2663 218 59 26 chr2 8867696 8868390 -244388193 - MER21B LTR ERV1 -49 814 98 226 225 11 101 chr2 8868509 8868598 -244387985 - MER21B LTR ERV1 -766 97 17 1635 191 38 0 chr2 8868605 8868920 -244387663 + MER7A DNA MER2_type 21 345 -1 25 0 0 0 chr2 8869310 8869335 -244387248 + AT_rich Low_complexity Low_complexity 1 25 0 1985 138 7 7 chr2 8869518 8869807 -244386776 - AluSx SINE Alu -23 289 1 327 271 97 32 chr2 8869978 8870133 -244386450 - MIR SINE MIR -48 214 50 856 171 14 47 chr2 8870319 8870530 -244386053 + MER3 DNA MER1_type 1 204 -5 2059 149 0 7 chr2 8870769 8871071 -244385512 + AluSx SINE Alu 4 303 -9 2150 113 0 14 chr2 8871927 8872247 -244384336 - AluSx SINE Alu 0 312 1 45 34 0 0 chr2 8872393 8872452 -244384131 + AT_rich Low_complexity Low_complexity 1 59 0 2307 92 7 0 chr2 8873430 8873725 -244382858 + AluSx SINE Alu 1 297 -15 489 228 0 35 chr2 8873889 8874034 -244382549 - L1ME3 LINE L1 -1 6161 6022 24 67 0 0 chr2 8874465 8874510 -244382073 + AT_rich Low_complexity Low_complexity 1 45 0 251 111 0 22 chr2 8874746 8874791 -244381792 + (GGAA)n Simple_repeat Simple_repeat 4 47 0 2280 97 0 16 chr2 8875856 8876166 -244380417 + AluSg SINE Alu 1 305 -5 1589 192 65 107 chr2 8876513 8877206 -244379377 + L1MC4a LINE L1 6840 7503 -305 2047 147 13 0 chr2 8877333 8877640 -244378943 + AluJb SINE Alu 1 311 -1 1865 128 0 4 chr2 8877640 8877905 -244378678 + AluSx SINE Alu 41 304 -8 503 351 26 22 chr2 8878488 8878719 -244377864 + MIR SINE MIR 5 236 -26 23 33 0 0 chr2 8879427 8879457 -244377126 + AT_rich Low_complexity Low_complexity 1 30 0 2178 107 3 3 chr2 8881756 8882047 -244374536 + AluSx SINE Alu 1 291 -21 266 248 198 66 chr2 8882504 8882625 -244373958 + L2 LINE L2 3136 3272 0 209 138 100 12 chr2 8883334 8883414 -244373169 + (TATAA)n Simple_repeat Simple_repeat 4 90 0 242 273 163 12 chr2 8883743 8883915 -244372668 + MLT1J LTR MaLR 314 511 0 320 222 58 125 chr2 8884450 8884554 -244372029 + MARNA DNA Mariner 91 200 -386 1865 142 16 32 chr2 8884554 8884863 -244371720 + AluJb SINE Alu 1 304 -8 320 222 58 125 chr2 8884863 8885069 -244371514 + MARNA DNA Mariner 200 380 -206 1615 164 82 0 chr2 8885186 8885467 -244371116 - AluJo SINE Alu -8 304 1 21 0 0 0 chr2 8885647 8885668 -244370915 + AT_rich Low_complexity Low_complexity 1 21 0 202 333 83 30 chr2 8886306 8886438 -244370145 + MIR SINE MIR 124 262 0 1762 168 7 3 chr2 8886614 8886917 -244369666 + AluJb SINE Alu 2 305 -7 2619 153 12 36 chr2 8886925 8887305 -244369278 + L1MB2 LINE L1 5681 6048 -123 2096 127 3 3 chr2 8887305 8887605 -244368978 + AluSx SINE Alu 1 300 -12 2619 153 12 36 chr2 8887605 8887726 -244368857 + L1MB2 LINE L1 6048 6170 -1 197 116 0 47 chr2 8887777 8887820 -244368763 + (CATATA)n Simple_repeat Simple_repeat 2 42 0 2184 79 20 17 chr2 8888019 8888311 -244368272 + AluY SINE Alu 2 294 -17 2353 90 7 0 chr2 8888541 8888851 -244367732 + AluSp SINE Alu 1 312 -1 194 135 27 0 chr2 8889139 8889176 -244367407 + L2 LINE L2 3273 3310 -3 883 237 53 40 chr2 8889558 8889879 -244366704 + L2 LINE L2 2333 2657 -657 913 99 46 7 chr2 8889883 8890035 -244366548 + L1MA7 LINE L1 6128 6285 -6 707 233 45 11 chr2 8890047 8890223 -244366360 - MER5A DNA MER1_type -6 183 2 435 324 97 29 chr2 8890223 8890705 -244365878 + L2 LINE L2 2709 3225 -88 763 236 68 8 chr2 8890711 8890948 -244365635 + L1ME1 LINE L1 4923 5173 -973 939 261 40 40 chr2 8890960 8891285 -244365298 + MLT1-int LTR MaLR 1046 1370 -1 928 243 41 4 chr2 8891285 8891540 -244365043 + L1ME1 LINE L1 5895 6159 -7 270 174 0 0 chr2 8891554 8891600 -244364983 + LTR56 LTR ERV1 349 394 -51 445 224 220 22 chr2 8891613 8891965 -244364618 + L1ME4a LINE L1 5601 6049 -72 2248 118 0 0 chr2 8892635 8892931 -244363652 - AluJb SINE Alu -16 296 1 208 340 10 10 chr2 8893160 8893263 -244363320 + L2 LINE L2 2594 2696 -618 1375 167 19 55 chr2 8893670 8893982 -244362601 - L1MA4 LINE L1 -3 6297 5997 205 283 50 0 chr2 8894039 8894099 -244362484 + MIR SINE MIR 197 259 -3 23 78 0 0 chr2 8894218 8894269 -244362314 + AT_rich Low_complexity Low_complexity 1 51 0 371 365 54 12 chr2 8894270 8894437 -244362146 + L2 LINE L2 3098 3271 -1 612 262 57 94 chr2 8894945 8895468 -244361115 + L2 LINE L2 2673 3312 -1 242 0 61 0 chr2 8895578 8895611 -244360972 + (TATG)n Simple_repeat Simple_repeat 2 36 0 1770 156 3 27 chr2 8895618 8895919 -244360664 - AluJo SINE Alu -18 294 1 207 324 28 0 chr2 8895940 8896011 -244360572 + L2 LINE L2 3223 3295 -18 657 82 0 10 chr2 8896355 8896453 -244360130 + AluJb SINE Alu 209 305 -7 562 242 24 30 chr2 8897192 8897357 -244359226 - MER5A DNA MER1_type 0 189 26 205 308 51 13 chr2 8897511 8897589 -244358994 + MER5A DNA MER1_type 70 150 -39 180 121 15 61 chr2 8898435 8898501 -244358082 + (CGGGG)n Simple_repeat Simple_repeat 1 63 0 1683 139 3 86 chr2 8898949 8899276 -244357307 + AluJo SINE Alu 5 306 0 2410 117 5 8 chr2 8899438 8899814 -244356769 - THE1C LTR MaLR 0 375 1 1812 160 37 7 chr2 8900463 8900763 -244355820 - AluSx SINE Alu -3 309 1 564 229 118 0 chr2 8900962 8901106 -244355477 + MLT1J2 LTR MaLR 244 404 -46 197 214 48 0 chr2 8901848 8901890 -244354693 - L2 LINE L2 -50 3222 3179 350 254 64 0 chr2 8904359 8904469 -244352114 + MLT1G1 LTR MaLR 1 117 -478 228 286 0 0 chr2 8904674 8904730 -244351853 + GA-rich Low_complexity Low_complexity 2 57 0 250 235 17 101 chr2 8904888 8905007 -244351576 + MLT1J2 LTR MaLR 451 559 -36 285 299 103 25 chr2 8905691 8905895 -244350688 + MLT1J-int LTR MaLR 1148 1367 -4 2384 145 43 17 chr2 8905984 8906405 -244350178 + MSTB1 LTR MaLR 1 432 0 246 273 0 15 chr2 8906412 8906478 -244350105 + MLT1J LTR MaLR 64 128 -427 5669 153 48 5 chr2 8906482 8906760 -244349823 + L1PB1 LINE L1 3868 4133 -2018 1082 47 24 12 chr2 8906760 8906930 -244349653 + (GAAA)n Simple_repeat Simple_repeat 3 174 0 5669 153 48 5 chr2 8906930 8908759 -244347824 + L1PB1 LINE L1 4133 6069 -82 356 161 0 0 chr2 8908831 8908893 -244347690 - MER63 DNA MER1_type -756 305 244 272 246 0 0 chr2 8908866 8908927 -244347656 + MER63 DNA MER1_type 464 524 -536 * 771 228 51 30 chr2 8908969 8909206 -244347377 - MER63 DNA MER1_type -815 246 5 986 165 79 43 chr2 8909209 8909444 -244347139 + MER33 DNA MER1_type 24 272 -2313 2368 107 7 0 chr2 8909444 8909752 -244346831 - AluSx SINE Alu -2 310 1 986 165 79 43 chr2 8909752 8909795 -244346788 + MER33 DNA MER1_type 272 312 -12 450 247 96 18 chr2 8909850 8910016 -244346567 + MLT1J LTR MaLR 231 409 -102 207 0 0 0 chr2 8910045 8910068 -244346515 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 229 300 43 0 chr2 8910347 8910417 -244346166 + MIR SINE MIR 74 146 -116 314 286 64 82 chr2 8910618 8910838 -244345745 + MLT1L LTR MaLR 389 604 -11 2751 227 77 11 chr2 8911383 8912695 -244343888 + L1ME2 LINE L1 4705 6106 -58 1004 187 61 53 chr2 8912862 8913124 -244343459 - Tigger1 DNA MER2_type -2141 277 14 3803 210 78 29 chr2 8913276 8914271 -244342312 - L1MB7 LINE L1 -10 6174 5229 1655 163 10 42 chr2 8914271 8914577 -244342006 - AluJo SINE Alu -14 298 3 3803 210 78 29 chr2 8914577 8915430 -244341153 - L1MB7 LINE L1 -955 5229 4250 2044 258 134 31 chr2 8915429 8916946 -244339637 - L1M4b LINE L1 -3954 3184 1331 * 847 225 136 108 chr2 8917473 8918174 -244338409 + LTR8A LTR ERV1 1 720 -7 400 233 25 63 chr2 8918202 8918361 -244338222 - L1M4b LINE L1 -6320 535 383 284 274 82 0 chr2 8920179 8920252 -244336331 - L2 LINE L2 -57 3215 3137 517 167 175 8 chr2 8920311 8920437 -244336146 + MER104 DNA Tc2 31 177 -3 568 251 114 0 chr2 8920439 8920606 -244335977 - MIR SINE MIR -63 199 14 963 182 0 28 chr2 8920625 8920801 -244335782 - AluJb SINE Alu 0 312 142 243 282 94 0 chr2 8921401 8921486 -244335097 - MIR SINE MIR -7 255 163 2679 133 27 0 chr2 8922344 8922758 -244333825 - MSTA LTR MaLR -3 425 1 1192 200 61 19 chr2 8922986 8923465 -244333118 - Charlie1b DNA MER1_type 0 523 1 366 80 0 0 chr2 8923830 8923880 -244332703 + (TTCA)n Simple_repeat Simple_repeat 3 52 0 1844 166 0 3 chr2 8923880 8924164 -244332419 - AluJb SINE Alu -29 283 1 627 118 0 0 chr2 8924185 8924278 -244332305 - L1P4 LINE L1 -469 5705 5613 3711 45 68 0 chr2 8924282 8924799 -244331784 + LTR30 LTR ERV1 1 552 -170 3237 16 3 0 chr2 8924799 8925185 -244331398 - L1PA4 LINE L1 -208 5947 5561 1594 45 0 0 chr2 8925185 8925387 -244331196 + L1PA4 LINE L1 5952 6153 -2 1307 78 6 0 chr2 8925387 8925566 -244331017 + LTR30 LTR ERV1 543 722 0 3426 81 15 68 chr2 8925566 8925854 -244330729 - L1PA8A LINE L1 -499 5632 5330 412 89 0 0 chr2 8925854 8925910 -244330673 - MSTA LTR MaLR -95 333 278 3426 81 15 68 chr2 8925910 8926480 -244330103 - L1PA8A LINE L1 -801 5330 4770 376 255 101 90 chr2 8927126 8927314 -244329269 + MIR SINE MIR 56 245 -17 1463 190 30 7 chr2 8927878 8928147 -244328436 - AluJo SINE Alu -30 282 8 292 327 9 47 chr2 8930613 8930720 -244325863 - MIR SINE MIR -82 126 24 272 279 29 0 chr2 8931050 8931118 -244325465 + L2 LINE L2 3153 3222 -50 2107 99 7 20 chr2 8931421 8931715 -244324868 + AluSg SINE Alu 21 310 0 222 37 0 0 chr2 8931723 8931750 -244324833 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 466 248 14 43 chr2 8932673 8932814 -244323769 - L2 LINE L2 0 3272 3136 2302 106 0 3 chr2 8935181 8935492 -244321091 - AluSx SINE Alu -2 310 1 744 100 27 0 chr2 8936307 8936417 -244320166 + MER3 DNA MER1_type 1 113 -96 1050 98 92 0 chr2 8936419 8936572 -244320011 + AluSg/x SINE Alu 137 303 -7 417 214 102 10 chr2 8936572 8936670 -244319913 + MER3 DNA MER1_type 103 209 0 197 257 139 0 chr2 8937334 8937435 -244319148 + L2 LINE L2 2230 2344 -970 * 251 300 29 0 chr2 8937433 8937503 -244319080 - L2 LINE L2 0 3313 3242 812 239 25 5 chr2 8937711 8937908 -244318675 + MER20 DNA MER1_type 1 201 -18 2197 113 0 3 chr2 8938769 8939062 -244317521 - AluSg SINE Alu -18 292 1 324 0 0 0 chr2 8939548 8939584 -244316999 + (CA)n Simple_repeat Simple_repeat 2 37 0 321 275 107 20 chr2 8940234 8940383 -244316200 + MIR SINE MIR 101 262 0 417 320 64 0 chr2 8940770 8940895 -244315688 - L2 LINE L2 -1 3271 3139 450 344 0 7 chr2 8941088 8941242 -244315341 - MIR SINE MIR -109 153 1 9436 136 25 11 chr2 8941367 8942991 -244313592 + Tigger1 DNA MER2_type 1 1647 -771 435 52 0 0 chr2 8943175 8943233 -244313350 + (TA)n Simple_repeat Simple_repeat 2 59 0 1317 164 36 73 chr2 8943233 8943507 -244313076 - AluJb SINE Alu -2 310 47 25 0 0 0 chr2 8943515 8943540 -244313043 + AT_rich Low_complexity Low_complexity 1 25 0 2378 91 3 0 chr2 8943741 8944037 -244312546 - AluSp SINE Alu -16 297 1 593 223 152 40 chr2 8944124 8944348 -244312235 - LTR50 LTR ERVL -356 439 191 189 0 0 0 chr2 8944529 8944550 -244312033 + (A)n Simple_repeat Simple_repeat 1 21 0 416 301 124 16 chr2 8945013 8945199 -244311384 - MIR3 SINE MIR -1 207 2 334 277 187 24 chr2 8945453 8945619 -244310964 - MIR SINE MIR -50 212 20 776 204 15 91 chr2 8946684 8947013 -244309570 + L1MC4 LINE L1 7738 8041 -1 358 250 36 18 chr2 8947306 8947418 -244309165 + MIR SINE MIR 31 144 -118 2219 106 10 0 chr2 8947541 8947834 -244308749 - AluSx SINE Alu -16 296 1 195 218 0 0 chr2 8948557 8948612 -244307971 + GA-rich Low_complexity Low_complexity 3 57 0 1127 157 41 83 chr2 8949248 8949490 -244307093 + AluJb SINE Alu 79 310 -2 408 55 0 0 chr2 8949492 8949547 -244307036 + (TA)n Simple_repeat Simple_repeat 2 56 0 279 282 56 51 chr2 8949853 8950069 -244306514 - L1MEd LINE L1 -4881 1238 1022 29 28 0 0 chr2 8950214 8950250 -244306333 + AT_rich Low_complexity Low_complexity 1 36 0 1887 143 14 0 chr2 8950690 8951011 -244305572 + AluSx SINE Alu 1 325 0 1294 251 256 3 chr2 8951091 8951725 -244304858 - LTR50 LTR ERVL -1 794 1 1469 174 14 56 chr2 8951944 8952231 -244304352 + AluJo SINE Alu 1 275 -37 560 119 50 0 chr2 8952268 8952369 -244304214 + L1MC4a LINE L1 6890 6995 -813 1714 176 41 13 chr2 8952499 8952890 -244303693 - LTR52 LTR ERVL -9 412 11 2046 160 21 0 chr2 8952910 8953285 -244303298 + MLT1B LTR MaLR 1 383 -7 2188 121 3 3 chr2 8953996 8954301 -244302282 + AluSx SINE Alu 6 310 -2 270 293 98 12 chr2 8954307 8954389 -244302194 + MIR SINE MIR 20 108 -154 2289 102 10 0 chr2 8954569 8954862 -244301721 - AluSp SINE Alu -17 296 1 21 36 0 0 chr2 8954868 8954896 -244301687 + AT_rich Low_complexity Low_complexity 1 28 0 468 239 118 31 chr2 8955928 8956296 -244300287 - L1ME LINE L1 -528 5593 5175 225 132 0 26 chr2 8957007 8957045 -244299538 + MER3 DNA MER1_type 46 82 -127 513 225 17 0 chr2 8957488 8957608 -244298975 + MER33 DNA MER1_type 1 122 -202 283 329 50 56 chr2 8957664 8957825 -244298758 - MER5A DNA MER1_type -12 177 18 586 298 116 6 chr2 8957923 8958285 -244298298 + L1ME3 LINE L1 5428 5829 -333 747 256 53 112 chr2 8958828 8959234 -244297349 - L1MC4 LINE L1 -561 7481 7130 437 90 15 0 chr2 8959234 8959301 -244297282 + (TCTA)n Simple_repeat Simple_repeat 3 70 0 747 256 53 112 chr2 8959301 8959574 -244297009 - L1MC4 LINE L1 -912 7130 6842 2384 174 133 2 chr2 8959744 8960197 -244296386 - MLT2B2 LTR ERVL -3 512 1 801 248 188 14 chr2 8960209 8960682 -244295901 - MLT1H LTR MaLR -5 550 1 1250 108 0 0 chr2 8961519 8961676 -244294907 + AluSq SINE Alu 1 157 -156 1556 88 83 5 chr2 8961676 8961893 -244294690 + L1PB1 LINE L1 5918 6151 0 23 0 0 0 chr2 8961893 8961916 -244294667 + AT_rich Low_complexity Low_complexity 1 23 0 4827 135 8 23 chr2 8961935 8962721 -244293862 + L1PB4 LINE L1 5378 6151 -5 396 0 0 0 chr2 8963085 8963129 -244293454 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 264 208 65 83 chr2 8964493 8964638 -244291945 + LTR47B LTR ERVL 254 384 -27 696 180 55 97 chr2 8964663 8964880 -244291703 - MER3 DNA MER1_type -1 208 1 2195 112 3 0 chr2 8965691 8965996 -244290587 + AluSq SINE Alu 1 306 -7 610 297 108 0 chr2 8966369 8966591 -244289992 - MIR SINE MIR -12 250 5 2048 124 0 17 chr2 8966618 8966945 -244289638 - AluSx SINE Alu 0 312 1 214 158 53 35 chr2 8967512 8967569 -244289014 + C-rich Low_complexity Low_complexity 1 58 0 22 99 0 0 chr2 8967678 8967749 -244288834 + GC_rich Low_complexity Low_complexity 1 71 0 510 246 222 10 chr2 8968489 8968696 -244287887 - MIR SINE MIR -3 259 9 576 97 0 0 chr2 8969423 8969495 -244287088 + AluJ/FRAM SINE Alu 222 293 -19 2086 113 17 13 chr2 8969497 8969798 -244286785 + AluSx SINE Alu 1 302 -10 225 0 0 0 chr2 8969812 8969837 -244286746 + (GA)n Simple_repeat Simple_repeat 2 26 0 710 274 87 17 chr2 8969900 8970130 -244286453 + MIR SINE MIR 3 248 -14 2466 188 33 35 chr2 8970131 8970202 -244286381 - MLT2B1 LTR ERVL -3 517 447 481 75 12 12 chr2 8970202 8970282 -244286301 + (TAGA)n Simple_repeat Simple_repeat 1 80 0 2466 188 33 35 chr2 8970282 8970722 -244285861 - MLT2B1 LTR ERVL -73 447 7 192 189 0 0 chr2 8971010 8971047 -244285536 - MIR SINE MIR -10 252 216 433 285 27 43 chr2 8971182 8971348 -244285235 + MIR SINE MIR 19 180 -66 205 262 110 84 chr2 8971920 8972111 -244284472 + MIR3 SINE MIR 5 200 -8 528 229 260 10 chr2 8973603 8973795 -244282788 + MIR SINE MIR 22 261 -1 186 174 0 0 chr2 8973800 8973846 -244282737 + (CAT)n Simple_repeat Simple_repeat 3 48 0 1609 106 5 0 chr2 8973923 8974140 -244282443 + L1PA10 LINE L1 5949 6166 -2 351 351 27 21 chr2 8974903 8975091 -244281492 + MER5A DNA MER1_type 1 189 0 1120 244 65 90 chr2 8975763 8975874 -244280709 - HAL1 LINE L1 -29 2478 2366 2045 108 19 54 chr2 8975874 8976190 -244280393 - AluSx SINE Alu -7 305 1 1120 244 65 90 chr2 8976190 8976590 -244279993 - HAL1 LINE L1 -141 2366 1980 410 329 40 13 chr2 8976700 8976928 -244279655 - HAL1 LINE L1 -510 1997 1764 513 180 39 47 chr2 8977103 8977231 -244279352 + MER106A DNA MER1_type 108 234 -2 235 323 21 0 chr2 8977310 8977403 -244279180 - LTR67 LTR ERVL -367 190 96 1539 208 90 32 chr2 8977485 8977984 -244278599 - HAL1 LINE L1 -910 1597 1070 2302 116 0 19 chr2 8978436 8978754 -244277829 + AluSx SINE Alu 1 312 0 22 0 0 0 chr2 8979037 8979059 -244277524 + AT_rich Low_complexity Low_complexity 1 22 0 353 205 36 12 chr2 8980262 8980345 -244276238 - L2 LINE L2 0 3313 3229 27 62 0 0 chr2 8980829 8980877 -244275706 + AT_rich Low_complexity Low_complexity 1 48 0 632 115 0 0 chr2 8981200 8981287 -244275296 + L1PA5 LINE L1 10 96 -6365 * 38548 51 6 1 chr2 8981254 8986802 -244269781 + L1PA5 LINE L1 893 6469 0 459 266 120 30 chr2 8986865 8987132 -244269451 + L1MC/D LINE L1 5254 5544 -2264 928 293 120 13 chr2 8987367 8987818 -244268765 + MLT1L LTR MaLR 24 522 -93 210 275 0 58 chr2 8988979 8989048 -244267535 - L2 LINE L2 -66 3206 3142 17757 186 53 18 chr2 8989187 8990316 -244266267 - L1PA15-16 LINE L1 -948 5901 4813 2295 82 0 0 chr2 8990316 8990624 -244265959 - AluY SINE Alu 0 308 1 17757 186 53 18 chr2 8990624 8991105 -244265478 - L1PA15-16 LINE L1 -2036 4813 4350 2162 135 0 0 chr2 8991105 8991402 -244265181 - AluSx SINE Alu -15 297 1 17757 186 53 18 chr2 8991402 8995517 -244261066 - L1PA15-16 LINE L1 -2499 4350 10 3402 126 23 6 chr2 8995533 8996050 -244260533 + Tigger1 DNA MER2_type 1893 2418 0 1702 180 27 23 chr2 8996314 8996614 -244259969 + AluJo SINE Alu 1 301 -11 429 220 86 59 chr2 8996928 8997114 -244259469 + L1MC5 LINE L1 7717 7907 -54 1945 174 0 3 chr2 8999347 8999658 -244256925 - AluJb SINE Alu -2 310 1 194 204 0 23 chr2 9000182 9000226 -244256357 - L2 LINE L2 0 3272 3230 224 246 87 14 chr2 9000637 9000706 -244255877 + MER5A DNA MER1_type 63 136 -53 322 326 183 15 chr2 9001004 9001332 -244255251 + L1MC/D LINE L1 5274 5656 -2152 299 342 0 8 chr2 9001637 9001754 -244254829 + LTR16B LTR ERVL 1 116 -348 267 259 88 31 chr2 9001824 9002017 -244254566 + LTR16B LTR ERVL 261 464 0 359 208 13 0 chr2 9002021 9002098 -244254485 - MIR SINE MIR -47 215 138 246 156 0 0 chr2 9002544 9002589 -244253994 + (CA)n Simple_repeat Simple_repeat 1 45 0 207 0 0 0 chr2 9004345 9004368 -244252215 + (CA)n Simple_repeat Simple_repeat 1 23 0 426 222 51 34 chr2 9004371 9004488 -244252095 + HAL1 LINE L1 795 913 -1594 1936 219 103 87 chr2 9004683 9004830 -244251753 + HAL1 LINE L1 964 1107 -1400 2209 105 0 7 chr2 9004830 9005125 -244251458 + AluSp SINE Alu 3 295 -18 1936 219 103 87 chr2 9005125 9005353 -244251230 + HAL1 LINE L1 1107 1330 -1177 2101 121 0 23 chr2 9005353 9005658 -244250925 + AluSx SINE Alu 1 298 -14 1936 219 103 87 chr2 9005658 9005802 -244250781 + HAL1 LINE L1 1330 1470 -1037 2420 57 3 3 chr2 9005802 9006098 -244250485 + AluY SINE Alu 1 296 -15 1936 219 103 87 chr2 9006098 9006515 -244250068 + HAL1 LINE L1 1470 1917 -590 277 271 35 104 chr2 9006601 9006967 -244249616 + HAL1 LINE L1 1849 2189 -318 5120 151 33 53 chr2 9006971 9007849 -244248734 + L1MB7 LINE L1 4901 5740 -444 2718 109 3 8 chr2 9007849 9008215 -244248368 - THE1B LTR MaLR 0 364 1 5120 151 33 53 chr2 9008215 9008639 -244247944 + L1MB7 LINE L1 5740 6171 -13 28425 34 0 0 chr2 9008659 9014824 -244241759 + L1PA4 LINE L1 4 6169 0 2408 81 3 0 chr2 9014826 9015121 -244241462 + AluSg SINE Alu 1 296 -14 374 291 108 24 chr2 9015121 9015416 -244241167 + HAL1 LINE L1 2187 2506 -1 429 293 73 24 chr2 9015733 9015938 -244240645 + MIR SINE MIR 37 251 -11 226 318 106 65 chr2 9016326 9016543 -244240040 + MIR SINE MIR 31 256 -6 1576 172 11 8 chr2 9016969 9017230 -244239353 - AluJb SINE Alu -44 268 7 345 267 151 5 chr2 9017262 9017496 -244239087 - L1ME2 LINE L1 -248 5914 5650 626 246 5 5 chr2 9017497 9017684 -244238899 - Charlie1 DNA MER1_type 0 2761 2575 629 292 5 10 chr2 9017690 9017907 -244238676 - L1ME2 LINE L1 -567 5599 5405 1808 134 33 24 chr2 9018119 9018448 -244238135 + MER1B DNA MER1_type 8 339 0 318 238 86 29 chr2 9018556 9018661 -244237922 + MIR SINE MIR 107 217 -45 491 206 44 56 chr2 9018665 9018825 -244237758 + L1MC4a LINE L1 5775 5932 -1876 360 0 0 0 chr2 9018847 9018887 -244237696 + (TA)n Simple_repeat Simple_repeat 2 41 0 2104 261 71 50 chr2 9018905 9018963 -244237620 + L1MC4a LINE L1 6104 6159 -1649 180 77 0 0 chr2 9018963 9018989 -244237594 + (TTAAA)n Simple_repeat Simple_repeat 3 28 0 2104 261 71 50 chr2 9018989 9019959 -244236624 + L1MC4a LINE L1 6159 7154 -654 295 276 152 21 chr2 9020035 9020177 -244236406 - MIR SINE MIR -62 146 15 22 0 0 0 chr2 9020816 9020838 -244235745 + AT_rich Low_complexity Low_complexity 1 22 0 2764 142 11 2 chr2 9021036 9021486 -244235097 - L1PA16 LINE L1 -1 6165 5712 2170 93 11 0 chr2 9021957 9022277 -244234306 - AluSg1 SINE Alu 0 323 1 1662 152 74 0 chr2 9022533 9022802 -244233781 - AluJb SINE Alu -23 289 1 322 333 139 6 chr2 9022833 9022998 -244233585 - MIR SINE MIR -38 224 38 208 269 0 0 chr2 9023722 9023774 -244232809 + L2 LINE L2 3262 3313 0 23 33 0 0 chr2 9025359 9025389 -244231194 + AT_rich Low_complexity Low_complexity 1 30 0 1191 222 18 45 chr2 9026813 9027210 -244229373 + L1ME1 LINE L1 5776 6161 -5 26 0 0 0 chr2 9027214 9027240 -244229343 + AT_rich Low_complexity Low_complexity 1 26 0 252 174 29 72 chr2 9027512 9027581 -244229002 - MIR3 SINE MIR -28 180 115 * 770 334 153 14 chr2 9027577 9028459 -244228124 + L2 LINE L2 2170 3179 -134 1623 100 4 8 chr2 9028600 9028841 -244227742 + L1PA8 LINE L1 5931 6170 -2 433 226 0 10 chr2 9028893 9028995 -244227588 + U13 snRNA snRNA 1 101 -3 305 264 94 19 chr2 9029459 9029565 -244227018 + L2 LINE L2 3189 3302 -11 251 294 118 8 chr2 9030354 9030473 -244226110 + MIR SINE MIR 55 186 -76 3496 152 73 6 chr2 9030665 9031354 -244225229 + L1MB8 LINE L1 5442 6176 -2 228 316 0 13 chr2 9031643 9031722 -244224861 + GA-rich Low_complexity Low_complexity 1 78 0 291 346 42 42 chr2 9031952 9032169 -244224414 + MIR SINE MIR 34 250 -12 525 194 0 11 chr2 9032702 9032795 -244223788 - L2 LINE L2 0 3272 3181 723 266 46 8 chr2 9033301 9033542 -244223041 + L1M4 LINE L1 3384 3633 -2513 947 236 98 0 chr2 9033546 9033822 -244222761 + L1MC4 LINE L1 7596 7898 -144 22 56 0 0 chr2 9033855 9033891 -244222692 + AT_rich Low_complexity Low_complexity 1 36 0 1525 148 67 78 chr2 9034027 9034400 -244222183 + L1MB2 LINE L1 5793 6161 -10 919 287 92 47 chr2 9035387 9035878 -244220705 + L2 LINE L2 2228 2740 -574 1825 178 18 50 chr2 9035891 9036292 -244220291 + L1MC3 LINE L1 7138 7525 -260 1805 144 46 7 chr2 9036292 9036576 -244220007 + AluJb SINE Alu 1 295 -17 1825 178 18 50 chr2 9036576 9036618 -244219965 + L1MC3 LINE L1 7525 7567 -218 1376 167 23 87 chr2 9036619 9037011 -244219572 + MLT1A2 LTR MaLR 3 505 0 1020 159 14 14 chr2 9037018 9037238 -244219345 + L1MC3 LINE L1 7566 7785 0 431 188 2 0 chr2 9037369 9037460 -244219123 + L1ME2 LINE L1 6069 6160 -2 352 279 33 25 chr2 9037506 9037628 -244218955 - MLT1G3 LTR MaLR -27 568 446 * 666 258 36 0 chr2 9037606 9037773 -244218810 - MLT1G3 LTR MaLR -187 343 171 307 239 51 17 chr2 9037833 9037950 -244218633 + L1ME4a LINE L1 5994 6114 -7 408 313 96 14 chr2 9039195 9039559 -244217024 - Tigger8 DNA MER2_type -162 504 111 254 374 0 26 chr2 9039727 9039842 -244216741 + L3 LINE CR1 1366 1477 -100 215 239 45 114 chr2 9039954 9040042 -244216541 - MIR SINE MIR -170 92 11 22 0 0 0 chr2 9040331 9040353 -244216230 + AT_rich Low_complexity Low_complexity 1 22 0 364 288 119 31 chr2 9041525 9041685 -244214898 - L3 LINE CR1 -380 1197 1024 400 264 37 62 chr2 9041763 9042005 -244214578 + Charlie8 DNA MER1_type 86 1419 -998 210 326 34 0 chr2 9042122 9042211 -244214372 - L3 LINE CR1 -708 869 778 740 147 0 0 chr2 9042326 9042435 -244214148 - FLAM_C SINE Alu -34 109 1 313 315 91 18 chr2 9043927 9044092 -244212491 - MIR SINE MIR -35 227 51 213 361 102 9 chr2 9044133 9044241 -244212342 - L2 LINE L2 -33 3239 3122 181 368 77 13 chr2 9044762 9044917 -244211666 - L2 LINE L2 -213 3059 2895 307 50 0 0 chr2 9045164 9045204 -244211379 + AluSg/x SINE Alu 218 257 -45 2526 50 0 3 chr2 9045589 9045889 -244210694 - AluY SINE Alu -12 299 1 289 346 0 28 chr2 9046018 9046125 -244210458 - MER5A DNA MER1_type -85 104 1 216 260 0 0 chr2 9046220 9046270 -244210313 - L2 LINE L2 -1444 1870 1821 473 264 129 49 chr2 9046495 9046844 -244209739 + LTR33 LTR ERVL 144 520 -1 477 236 67 61 chr2 9047658 9047823 -244208760 - MIR SINE MIR -52 210 45 208 231 154 0 chr2 9048473 9048538 -244208045 + MIR SINE MIR 123 197 -65 871 168 14 0 chr2 9050555 9050698 -244205885 - Tigger3b DNA MER2_type 0 1232 1088 4126 137 75 41 chr2 9050703 9051549 -244205034 - Tigger3b DNA MER2_type -357 874 1 1704 170 16 31 chr2 9053335 9053652 -244202931 + AluJo SINE Alu 1 312 0 931 102 5 43 chr2 9053653 9053839 -244202744 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 811 131 32 20 chr2 9053825 9054077 -244202506 + GA-rich Low_complexity Low_complexity 1 255 0 * 28 29 0 0 chr2 9054736 9054771 -244201812 + AT_rich Low_complexity Low_complexity 1 35 0 197 315 22 11 chr2 9054936 9055025 -244201558 + L3 LINE CR1 1485 1574 -3 2804 179 54 48 chr2 9055632 9056338 -244200245 - MER67C LTR ERV1 0 710 1 324 218 23 0 chr2 9056692 9056779 -244199804 - HsTC2 DNA Tc2 -2 1896 1808 2400 194 83 19 chr2 9056810 9057936 -244198647 - L1M3c LINE L1 -4805 1336 3 9711 158 76 48 chr2 9058018 9058607 -244197976 - L1MC3 LINE L1 0 7785 7214 280 284 0 0 chr2 9058607 9058688 -244197895 - MLT1F1 LTR MaLR -442 125 45 9711 158 76 48 chr2 9058688 9060247 -244196336 - L1MC3 LINE L1 -571 7214 5496 452 273 124 69 chr2 9060252 9060713 -244195870 - LTR67 LTR ERVL -40 517 32 348 261 50 36 chr2 9060745 9060967 -244195616 + L1ME4a LINE L1 5699 5923 -198 21 0 0 0 chr2 9061098 9061119 -244195464 + AT_rich Low_complexity Low_complexity 1 21 0 1972 149 10 3 chr2 9061128 9061424 -244195159 + AluSx SINE Alu 1 298 -14 868 302 38 44 chr2 9061663 9062136 -244194447 - MLT1J LTR MaLR -9 502 33 586 195 81 0 chr2 9062136 9062259 -244194324 + FLAM_A SINE Alu 1 133 0 644 106 0 10 chr2 9062264 9062368 -244194215 + (GGAA)n Simple_repeat Simple_repeat 3 105 0 273 311 39 19 chr2 9062388 9062491 -244194092 - MER5B DNA MER1_type 0 178 74 1762 145 31 102 chr2 9062903 9063323 -244193260 + MLT1B LTR MaLR 1 390 0 607 202 9 0 chr2 9063444 9063558 -244193025 - MER31B LTR ERV1 -351 115 1 2249 119 7 0 chr2 9064306 9064609 -244191974 - AluSq SINE Alu -8 305 1 352 250 71 120 chr2 9064612 9064796 -244191787 - MER5B DNA MER1_type -3 175 1 456 296 0 0 chr2 9064796 9064904 -244191679 - MIR3 SINE MIR -48 160 53 604 156 266 0 chr2 9065154 9065308 -244191275 + L1PA16 LINE L1 5963 6157 -9 1963 137 50 7 chr2 9065350 9065650 -244190933 + AluSq SINE Alu 1 313 0 2906 160 73 20 chr2 9066370 9066970 -244189613 + MER39 LTR ERV1 76 707 0 2092 116 184 68 chr2 9067045 9067454 -244189129 + LTR54 LTR ERV1 1 470 -40 1648 184 0 49 chr2 9067454 9067758 -244188825 + AluJb SINE Alu 3 291 -21 2092 116 184 68 chr2 9067758 9067805 -244188778 + LTR54 LTR ERV1 470 510 0 1277 157 5 18 chr2 9069330 9069547 -244187036 + AluJo SINE Alu 85 298 -14 2322 99 0 26 chr2 9069627 9069939 -244186644 + AluSc SINE Alu 1 304 -5 2161 123 13 7 chr2 9069998 9070299 -244186284 + AluSx SINE Alu 1 303 -9 435 188 35 0 chr2 9070616 9070701 -244185882 + AluJ/FLAM SINE Alu 2 89 -223 226 252 97 19 chr2 9070702 9070805 -244185778 + MIR3 SINE MIR 98 208 0 313 241 17 129 chr2 9070968 9071025 -244185558 + L3 LINE CR1 1282 1321 -256 1967 147 3 0 chr2 9071025 9071318 -244185265 + AluJb SINE Alu 1 294 -18 313 241 17 129 chr2 9071318 9071376 -244185207 + L3 LINE CR1 1321 1384 -193 599 293 72 14 chr2 9071416 9071638 -244184945 - MIR SINE MIR -26 236 2 238 277 15 0 chr2 9071666 9071731 -244184852 - L1MEc LINE L1 -5026 1370 1305 2648 64 0 0 chr2 9071795 9072106 -244184477 + AluY SINE Alu 1 311 0 559 273 81 48 chr2 9072524 9072856 -244183727 - L1MEc LINE L1 -4939 1266 932 2599 196 12 24 chr2 9072856 9073367 -244183216 - MLT1D LTR MaLR 0 505 1 559 273 81 48 chr2 9073367 9073442 -244183141 - L1MEc LINE L1 -5273 932 861 634 321 46 57 chr2 9073878 9074227 -244182356 - L2 LINE L2 0 3272 2928 1623 142 0 28 chr2 9075926 9076179 -244180404 - AluJb SINE Alu -9 303 58 1909 159 3 3 chr2 9077123 9077424 -244179159 + AluJb SINE Alu 1 301 -11 479 278 44 58 chr2 9078434 9078639 -244177944 - MIR SINE MIR -2 260 59 957 196 111 50 chr2 9078641 9078921 -244177662 - L1ME3A LINE L1 -1 6169 5873 1005 244 130 22 chr2 9078923 9079377 -244177206 - L1ME3A LINE L1 -1155 4991 4489 1702 149 0 0 chr2 9079377 9079632 -244176951 - AluSx SINE Alu -2 310 56 2063 261 91 33 chr2 9079732 9079803 -244176780 - L1ME3A LINE L1 -2576 3570 3505 2255 102 0 0 chr2 9079803 9080113 -244176470 - AluSg SINE Alu 0 310 1 2063 261 91 33 chr2 9080113 9080263 -244176320 - L1ME3A LINE L1 -2641 3505 3365 2606 67 0 6 chr2 9080263 9080576 -244176007 - AluY SINE Alu 0 311 1 2063 261 91 33 chr2 9080576 9080827 -244175756 - L1ME3A LINE L1 -2781 3365 3130 1246 152 46 112 chr2 9080827 9081002 -244175581 - AluSq SINE Alu -9 304 158 207 0 0 0 chr2 9081002 9081025 -244175558 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1246 152 46 112 chr2 9081025 9081172 -244175411 - AluSq SINE Alu -155 158 3 2063 261 91 33 chr2 9081172 9081864 -244174719 - L1ME3A LINE L1 -3016 3130 2336 561 224 19 26 chr2 9081959 9082115 -244174468 - L1M4 LINE L1 -2161 3985 3831 254 272 56 80 chr2 9082118 9082243 -244174340 - L2 LINE L2 0 3272 3151 994 146 19 13 chr2 9082700 9083035 -244173548 + FRAM SINE Alu 1 332 0 205 237 0 0 chr2 9083035 9083073 -244173510 + polypurine Low_complexity Low_complexity 3 40 0 233 374 30 26 chr2 9083154 9083456 -244173127 + L2 LINE L2 2587 2889 -425 2384 93 0 0 chr2 9084227 9084518 -244172065 + AluSx SINE Alu 1 291 -21 189 196 0 0 chr2 9085119 9085165 -244171418 + (CCA)n Simple_repeat Simple_repeat 2 47 0 660 192 0 17 chr2 9087023 9087195 -244169388 + (TG)n Simple_repeat Simple_repeat 2 170 0 245 263 219 53 chr2 9087424 9087538 -244169045 - L2 LINE L2 0 3272 3140 259 324 36 27 chr2 9088752 9088863 -244167720 - MIR SINE MIR -70 192 81 2035 151 20 0 chr2 9089621 9089919 -244166664 + AluJb SINE Alu 2 305 -7 2295 122 0 0 chr2 9090657 9090951 -244165632 + AluSx SINE Alu 1 294 -18 407 247 77 71 chr2 9091325 9091495 -244165088 - MIR SINE MIR -61 201 31 672 325 40 4 chr2 9091750 9092002 -244164581 + MIR SINE MIR 1 261 -1 2116 180 62 5 chr2 9092087 9092520 -244164063 - MER65C LTR ERV1 -2 459 2 2406 96 0 0 chr2 9094091 9094394 -244162189 + AluSx SINE Alu 1 303 -9 414 262 51 98 chr2 9095108 9095322 -244161261 + MIR SINE MIR 3 206 -56 284 235 15 15 chr2 9096098 9096161 -244160422 - MIR SINE MIR -36 226 164 450 289 94 25 chr2 9096161 9096385 -244160198 + MIR SINE MIR 3 239 -23 189 264 125 14 chr2 9096403 9096475 -244160108 - MIR SINE MIR -123 139 60 701 293 173 17 chr2 9098232 9098649 -244157934 + L1ME3A LINE L1 5433 5914 -256 2088 154 0 0 chr2 9098744 9099050 -244157533 + AluJb SINE Alu 1 306 -6 1835 103 107 11 chr2 9100909 9101206 -244155377 + AluSx SINE Alu 2 312 0 579 299 83 25 chr2 9101218 9101459 -244155124 + MIR SINE MIR 8 262 0 389 319 187 20 chr2 9102124 9102722 -244153861 + L2 LINE L2 2034 2731 -583 237 243 0 0 chr2 9102806 9102913 -244153670 + CT-rich Low_complexity Low_complexity 4 110 0 222 273 210 49 chr2 9104139 9104191 -244152392 + MIR SINE MIR 96 138 -124 2268 97 60 31 chr2 9104191 9104543 -244152040 + THE1B LTR MaLR 3 364 0 222 273 210 49 chr2 9104543 9104633 -244151950 + MIR SINE MIR 138 261 -1 1091 203 37 67 chr2 9104706 9104979 -244151604 + L1ME2 LINE L1 5643 5907 -257 1848 184 23 3 chr2 9104979 9105284 -244151299 - AluJb SINE Alu -1 311 1 1091 203 37 67 chr2 9105284 9105357 -244151226 + L1ME2 LINE L1 5907 5981 -183 396 338 29 0 chr2 9105611 9105747 -244150836 - MIR SINE MIR -10 252 113 381 227 58 138 chr2 9106407 9106493 -244150090 - L1ME LINE L1 -429 5692 5601 1952 171 0 0 chr2 9106493 9106798 -244149785 - AluJo SINE Alu -2 310 6 381 227 58 138 chr2 9106798 9106936 -244149647 - L1ME LINE L1 -520 5601 5486 2230 99 0 7 chr2 9107125 9107417 -244149166 - AluY SINE Alu -21 290 1 201 176 0 0 chr2 9107532 9107566 -244149017 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 580 273 64 11 chr2 9107654 9107841 -244148742 - MIR SINE MIR -28 234 38 441 286 67 0 chr2 9107888 9108007 -244148576 + MIR SINE MIR 23 149 -113 2294 105 3 0 chr2 9108196 9108500 -244148083 + AluSq SINE Alu 1 305 -8 2018 137 6 26 chr2 9109021 9109334 -244147249 - AluJo SINE Alu -5 307 1 353 203 0 14 chr2 9109892 9109961 -244146622 + MIR3 SINE MIR 89 156 -52 1698 228 13 51 chr2 9110300 9110808 -244145775 - L1PA16 LINE L1 -1 6165 5706 2145 147 0 3 chr2 9110825 9111132 -244145451 + AluSx SINE Alu 1 306 -6 515 242 204 8 chr2 9111293 9111533 -244145050 - L1ME3A LINE L1 -219 5951 5665 1898 185 0 0 chr2 9112861 9113163 -244143420 + AluJb SINE Alu 6 307 -5 2295 100 0 38 chr2 9113218 9113538 -244143045 + AluSq SINE Alu 1 308 -5 189 74 0 0 chr2 9113564 9113591 -244142992 + (CA)n Simple_repeat Simple_repeat 2 28 0 1121 158 30 0 chr2 9113929 9114132 -244142451 + MER2 DNA MER2_type 3 211 -134 1792 141 11 0 chr2 9114142 9114405 -244142178 - AluJb SINE Alu -5 307 42 186 43 0 0 chr2 9115198 9115221 -244141362 + (A)n Simple_repeat Simple_repeat 1 23 0 284 152 0 0 chr2 9115242 9115288 -244141295 - L2 LINE L2 0 3313 3268 214 278 178 0 chr2 9116151 9116241 -244140342 - L2 LINE L2 -1 3312 3207 2076 128 0 16 chr2 9116554 9116859 -244139724 - AluSx SINE Alu -12 300 1 28 0 0 0 chr2 9117216 9117244 -244139339 + AT_rich Low_complexity Low_complexity 1 28 0 783 133 0 0 chr2 9117244 9117349 -244139234 - FLAM_C SINE Alu -25 118 14 1297 266 64 21 chr2 9117371 9117807 -244138776 - MLT1F LTR MaLR 0 542 88 1062 182 9 78 chr2 9117807 9118038 -244138545 - AluJo SINE Alu -22 290 76 1930 203 19 7 chr2 9118048 9118467 -244138116 - L1MB4 LINE L1 -4 6176 5753 245 293 0 40 chr2 9118468 9118567 -244138016 - MLT1F LTR MaLR -444 98 4 237 337 105 0 chr2 9118595 9118690 -244137893 + L2 LINE L2 3186 3290 -23 286 197 15 45 chr2 9118852 9118918 -244137665 - MIR3 SINE MIR -18 190 127 547 218 0 8 chr2 9118928 9119052 -244137531 - MLT1C LTR MaLR -8 459 337 942 194 90 18 chr2 9119078 9119376 -244137207 - MLT1C LTR MaLR -155 412 85 257 204 0 0 chr2 9119393 9119447 -244137136 - AluJ/monomer SINE Alu 0 302 249 204 313 109 0 chr2 9120028 9120156 -244136427 - L2 LINE L2 -274 2998 2857 889 214 92 56 chr2 9120742 9121101 -244135482 - L1MD2 LINE L1 -1 6358 5987 180 0 0 0 chr2 9121109 9121129 -244135454 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 401 24 0 176 chr2 9121129 9121167 -244135416 - MER41A LTR ERV1 -89 465 448 2220 94 37 13 chr2 9121167 9121466 -244135117 + AluSx SINE Alu 3 308 -4 401 24 0 176 chr2 9121466 9121507 -244135076 - MER41A LTR ERV1 -106 448 401 2089 206 20 15 chr2 9121512 9121969 -244134614 - L1MD2 LINE L1 -465 5894 5436 28 0 0 0 chr2 9123981 9124009 -244132574 + GC_rich Low_complexity Low_complexity 1 28 0 245 197 15 15 chr2 9124490 9124556 -244132027 + (CCG)n Simple_repeat Simple_repeat 3 68 0 30 97 0 0 chr2 9124578 9124671 -244131912 + GC_rich Low_complexity Low_complexity 1 93 0 183 108 216 0 chr2 9124914 9124951 -244131632 + MIR SINE MIR 210 254 -8 856 115 122 22 chr2 9125098 9125237 -244131346 - AluJb SINE Alu -159 153 1 3289 200 33 26 chr2 9125551 9126148 -244130435 + MER44D DNA MER2_type 1 477 -2010 1927 153 27 0 chr2 9126148 9126448 -244130135 + AluJb SINE Alu 1 308 -4 3289 200 33 26 chr2 9126448 9126570 -244130013 + MER44D DNA MER2_type 477 597 -8 981 192 52 5 chr2 9126769 9126962 -244129621 + AluJb SINE Alu 96 297 -15 247 240 93 0 chr2 9127112 9127187 -244129396 + MIR SINE MIR 113 194 -68 586 259 58 0 chr2 9127479 9127653 -244128930 + L1M4 LINE L1 3850 4033 -2113 898 82 0 0 chr2 9127903 9128013 -244128570 + AluSg/x SINE Alu 195 304 -5 2125 125 0 3 chr2 9128022 9128310 -244128273 + AluSx SINE Alu 1 287 -25 546 288 55 20 chr2 9128456 9128794 -244127789 - L1MC/D LINE L1 -476 5645 5293 320 311 29 10 chr2 9128840 9128943 -244127640 - L1MC/D LINE L1 -1082 5064 4960 277 282 42 6 chr2 9129082 9129246 -244127337 + LTR16C LTR ERVL 271 407 -50 2331 97 7 3 chr2 9129248 9129557 -244127026 + AluSg SINE Alu 1 310 0 426 315 70 38 chr2 9130090 9130139 -244126444 - L1ME4a LINE L1 -206 5915 5869 2159 97 34 27 chr2 9130139 9130437 -244126146 + AluSq SINE Alu 1 300 -13 426 315 70 38 chr2 9130437 9130600 -244125983 - L1ME4a LINE L1 -252 5869 5696 343 108 15 62 chr2 9130626 9130691 -244125892 + MSTC LTR MaLR 1 62 -366 * 418 121 0 0 chr2 9130672 9130738 -244125845 + MSTC LTR MaLR 297 362 -66 2510 80 0 0 chr2 9130739 9131039 -244125544 + AluY SINE Alu 1 300 -11 2744 26 0 3 chr2 9131575 9131880 -244124703 + AluY SINE Alu 1 304 -7 2259 89 43 6 chr2 9131883 9132233 -244124350 + L1MA3 LINE L1 5943 6305 0 236 204 204 19 chr2 9132853 9132961 -244123622 - MER3 DNA MER1_type 0 209 82 883 149 105 88 chr2 9133256 9133551 -244123032 + MER58D DNA MER1_type 4 303 -83 195 42 0 0 chr2 9133679 9133703 -244122880 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 2578 47 3 3 chr2 9133926 9134227 -244122356 - AluY SINE Alu -10 301 1 1793 146 30 4 chr2 9134295 9134562 -244122021 - AluSx SINE Alu -38 274 1 22 0 0 0 chr2 9134904 9134926 -244121657 + AT_rich Low_complexity Low_complexity 1 22 0 211 305 211 21 chr2 9136628 9136723 -244119860 - L2 LINE L2 -5 3267 3155 288 253 64 56 chr2 9136726 9136895 -244119688 - MIR SINE MIR -62 146 19 241 309 44 69 chr2 9137662 9137866 -244118717 + MIR3 SINE MIR 10 208 0 268 270 63 56 chr2 9138287 9138413 -244118170 - MIR3 SINE MIR -67 141 15 328 305 250 6 chr2 9139210 9139374 -244117209 - MIR SINE MIR -12 250 47 1591 192 24 3 chr2 9139811 9140102 -244116481 + AluJo SINE Alu 1 297 -15 1697 145 54 30 chr2 9140362 9140659 -244115924 + AluJb SINE Alu 1 304 -8 183 320 77 13 chr2 9140804 9140882 -244115701 - MIR SINE MIR -95 113 31 464 246 39 52 chr2 9141051 9141236 -244115347 - L2 LINE L2 -12 3301 3073 231 236 14 42 chr2 9141848 9141920 -244114663 - MIR SINE MIR -102 106 37 1634 173 30 23 chr2 9142629 9142929 -244113654 - AluSg SINE Alu -8 302 1 2503 53 0 0 chr2 9143539 9143847 -244112736 + AluY SINE Alu 1 308 0 271 246 16 0 chr2 9144584 9144645 -244111938 - L2 LINE L2 -3 3269 3208 364 271 27 38 chr2 9144846 9144979 -244111604 - MIR SINE MIR -59 149 50 1887 113 8 0 chr2 9145278 9145535 -244111048 - AluSx SINE Alu -53 259 1 466 272 63 19 chr2 9145650 9145808 -244110775 - MLT1J2 LTR MaLR -284 166 2 545 247 97 53 chr2 9145808 9146035 -244110548 + L2 LINE L2 3045 3281 -32 183 80 0 0 chr2 9146373 9146398 -244110185 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 22 88 0 0 chr2 9146545 9146602 -244109981 + AT_rich Low_complexity Low_complexity 1 57 0 313 242 57 117 chr2 9146610 9146706 -244109877 + L1MC5 LINE L1 7688 7788 -173 2067 120 0 46 chr2 9146706 9146997 -244109586 + AluSq SINE Alu 5 281 -32 231 36 0 0 chr2 9146997 9147025 -244109558 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 2067 120 0 46 chr2 9147025 9147057 -244109526 + AluSq SINE Alu 281 313 0 313 242 57 117 chr2 9147057 9147224 -244109359 + L1MC5 LINE L1 7788 7935 -26 372 343 12 58 chr2 9147550 9147666 -244108917 - MIR3 SINE MIR -14 194 87 2277 115 3 10 chr2 9147666 9147978 -244108605 + AluSx SINE Alu 1 310 -2 372 343 12 58 chr2 9147978 9148033 -244108550 - MIR3 SINE MIR -121 87 31 1895 150 20 3 chr2 9148395 9148689 -244107894 - AluJb SINE Alu -13 299 1 442 316 102 45 chr2 9148707 9148951 -244107632 - MIR SINE MIR -4 258 1 213 108 0 0 chr2 9149456 9149493 -244107090 + (CA)n Simple_repeat Simple_repeat 1 37 0 2098 205 75 0 chr2 9149627 9150110 -244106473 + L1MB7 LINE L1 5657 6175 -9 341 253 175 32 chr2 9150331 9150485 -244106098 + MIR SINE MIR 27 202 -60 512 247 26 74 chr2 9150880 9151070 -244105513 - MIR SINE MIR -76 186 6 707 206 65 35 chr2 9151174 9151344 -244105239 - MER45A DNA AcHobo 0 178 4 522 103 0 23 chr2 9152008 9152095 -244104488 + MLT1C LTR MaLR 3 87 -380 295 137 0 0 chr2 9152308 9152359 -244104224 + Alu SINE Alu 246 296 -5 286 279 51 0 chr2 9154240 9154319 -244102264 - MIR SINE MIR -84 178 96 275 293 49 24 chr2 9155459 9155582 -244101001 + MIR SINE MIR 86 211 -51 822 133 0 8 chr2 9156126 9156246 -244100337 - FLAM_A SINE Alu -12 121 3 546 237 201 16 chr2 9156488 9156682 -244099901 - MIR SINE MIR -5 257 28 1868 175 3 0 chr2 9158009 9158324 -244098259 + AluSx SINE Alu 1 316 0 2363 98 0 0 chr2 9159117 9159413 -244097170 + AluSc SINE Alu 1 296 -13 633 275 55 22 chr2 9159479 9159661 -244096922 - MIR SINE MIR -1 261 74 355 267 48 0 chr2 9160522 9160627 -244095956 + MIR SINE MIR 56 165 -97 412 259 6 6 chr2 9161112 9161238 -244095345 - MIR SINE MIR -66 142 46 479 241 99 0 chr2 9161914 9162055 -244094528 + MLT1F1 LTR MaLR 411 565 -2 2366 94 0 3 chr2 9162210 9162508 -244094075 + AluSx SINE Alu 1 297 -15 2233 107 23 3 chr2 9163281 9163580 -244093003 + AluSp SINE Alu 1 305 -8 261 83 0 0 chr2 9163580 9163616 -244092967 + (GGAA)n Simple_repeat Simple_repeat 1 36 0 690 253 116 58 chr2 9164786 9165236 -244091347 + MLT1J LTR MaLR 28 503 -8 387 329 36 7 chr2 9165289 9165426 -244091157 - MIR3 SINE MIR -10 198 58 460 230 112 37 chr2 9165438 9165478 -244091105 + LTR33 LTR ERVL 16 52 -469 2046 109 31 7 chr2 9165478 9165771 -244090812 - AluSg1 SINE Alu -9 300 1 460 230 112 37 chr2 9165771 9165891 -244090692 + LTR33 LTR ERVL 52 188 -333 518 191 118 7 chr2 9166642 9166778 -244089805 - MER63 DNA MER1_type -53 783 7 217 333 53 0 chr2 9166846 9166921 -244089662 - MER5A DNA MER1_type -1 188 110 614 215 0 6 chr2 9167179 9167351 -244089232 + (TGGA)n Simple_repeat Simple_repeat 1 171 0 1023 81 0 0 chr2 9167466 9167590 -244088993 + AluSg/x SINE Alu 182 305 -7 322 218 24 135 chr2 9167773 9167943 -244088640 + LTR67 LTR ERVL 5 155 -402 462 246 42 7 chr2 9168103 9168245 -244088338 + LTR67 LTR ERVL 386 532 -25 2284 108 0 10 chr2 9168423 9168728 -244087855 + AluSg SINE Alu 3 304 -6 330 286 40 32 chr2 9168741 9168867 -244087716 - MER5A DNA MER1_type -19 170 44 329 234 175 44 chr2 9168745 9168882 -244087701 + MER5A DNA MER1_type 35 189 0 * 275 199 109 33 chr2 9169224 9169355 -244087228 - LTR33A LTR ERVL -287 234 69 227 306 122 0 chr2 9169474 9169572 -244087011 - MIR SINE MIR -69 139 30 412 230 11 46 chr2 9170002 9170089 -244086494 - MIR3 SINE MIR -54 154 71 598 111 0 0 chr2 9170423 9170513 -244086070 - MER41B LTR ERV1 0 635 546 4603 91 11 20 chr2 9171592 9172233 -244084350 - MER41B LTR ERV1 0 635 1 303 225 42 0 chr2 9172392 9172463 -244084120 + MER105 DNA DNA 1 74 -130 257 246 48 16 chr2 9172488 9172614 -244083969 + (CATA)n Simple_repeat Simple_repeat 2 131 0 680 269 52 70 chr2 9172617 9172955 -244083628 - LTR16A LTR ERVL -48 402 70 3266 160 17 91 chr2 9172955 9173700 -244082883 + LTR8 LTR ERV1 1 690 -1 680 269 52 70 chr2 9173700 9173748 -244082835 - LTR16A LTR ERVL -380 70 23 2444 193 77 50 chr2 9173771 9174130 -244082453 + L1ME1 LINE L1 4614 4962 -1184 748 157 0 25 chr2 9174130 9174275 -244082308 - FLAM_C SINE Alu 0 142 1 2444 193 77 50 chr2 9174275 9174675 -244081908 + L1ME1 LINE L1 4962 5396 -750 1712 199 10 16 chr2 9174669 9175055 -244081528 + L1ME1 LINE L1 5615 5998 -168 * 2172 130 0 3 chr2 9175168 9175469 -244081114 + AluSx SINE Alu 1 300 -12 2308 91 10 7 chr2 9175469 9175776 -244080807 + AluSg1 SINE Alu 1 308 -1 1639 188 57 39 chr2 9175930 9176313 -244080270 - MLT1B LTR MaLR 0 390 1 236 245 19 19 chr2 9176355 9176408 -244080175 + MIR SINE MIR 23 75 -133 341 229 73 68 chr2 9176443 9176635 -244079948 + MER117 DNA MER1_type 2 194 -3 2149 129 0 10 chr2 9176882 9177185 -244079398 + AluSx SINE Alu 1 300 -12 342 234 53 0 chr2 9177253 9177347 -244079236 - MER20 DNA MER1_type -57 162 64 400 173 146 45 chr2 9177708 9177818 -244078765 + MIR SINE MIR 29 149 -113 288 212 8 127 chr2 9177823 9177892 -244078691 + MLT1J LTR MaLR 1 53 -458 1924 156 0 0 chr2 9177892 9178222 -244078361 - AluSx SINE Alu 0 330 1 288 212 8 127 chr2 9178222 9178269 -244078314 + MLT1J LTR MaLR 53 104 -407 536 254 110 76 chr2 9178283 9178574 -244078009 + MLT1J LTR MaLR 205 505 -6 23 0 0 0 chr2 9178714 9178737 -244077846 + AT_rich Low_complexity Low_complexity 1 23 0 185 288 125 0 chr2 9179081 9179161 -244077422 - MIR SINE MIR -52 210 121 534 305 6 0 chr2 9179296 9179463 -244077120 - MER119 DNA MER1_type -290 293 126 23 33 0 0 chr2 9179570 9179600 -244076983 + AT_rich Low_complexity Low_complexity 1 30 0 676 152 27 18 chr2 9179600 9179712 -244076871 - FLAM_A SINE Alu -18 124 12 313 247 25 0 chr2 9179721 9179802 -244076781 - MER119 DNA MER1_type -496 87 5 2303 105 0 3 chr2 9180045 9180350 -244076233 - AluSq SINE Alu -9 304 1 524 216 0 8 chr2 9180422 9180556 -244076027 + (TG)n Simple_repeat Simple_repeat 2 134 0 1004 187 44 4 chr2 9180700 9180951 -244075632 + L1 LINE L1 4247 4507 -1639 422 314 24 8 chr2 9181029 9181153 -244075430 + HAL1 LINE L1 1255 1380 -1127 2201 126 0 3 chr2 9181158 9181459 -244075124 + AluSx SINE Alu 3 302 -10 427 169 79 11 chr2 9181562 9181651 -244074932 - LTR54 LTR ERV1 -373 137 43 341 163 174 0 chr2 9181652 9181744 -244074839 + HAL1 LINE L1 2097 2204 -303 472 214 0 0 chr2 9181763 9181852 -244074731 - LTR49 LTR ERV1 0 595 507 534 138 0 0 chr2 9181862 9181942 -244074641 + FLAM SINE Alu 42 121 -22 2106 121 29 10 chr2 9181966 9182272 -244074311 - AluSx SINE Alu 0 312 1 708 264 110 35 chr2 9182315 9182422 -244074161 - LTR48B LTR ERV1 -150 494 397 3500 128 56 0 chr2 9182422 9182921 -244073662 - MER1A DNA MER1_type 0 527 1 708 264 110 35 chr2 9182921 9183131 -244073452 - LTR48B LTR ERV1 -247 397 153 4550 57 37 11 chr2 9183131 9184147 -244072436 - MER11A LTR ERVK 0 1266 1 443 75 0 50 chr2 9184147 9184226 -244072357 - LTR48B LTR ERV1 -486 158 84 365 226 34 124 chr2 9184385 9184477 -244072106 + HAL1 LINE L1 2260 2359 -148 2063 155 0 0 chr2 9184477 9184767 -244071816 + AluJb SINE Alu 1 290 -22 365 226 34 124 chr2 9184767 9184940 -244071643 + HAL1 LINE L1 2359 2501 -6 2246 131 3 0 chr2 9185001 9185306 -244071277 + AluSx SINE Alu 1 306 -6 1093 261 65 21 chr2 9185446 9185771 -244070812 + MER58B DNA MER1_type 1 339 -2 463 325 33 0 chr2 9185804 9185955 -244070628 + MIR SINE MIR 51 206 -56 2527 80 0 0 chr2 9186306 9186608 -244069975 + AluSq SINE Alu 1 302 -11 242 254 58 56 chr2 9187352 9187524 -244069059 - MIR SINE MIR -62 146 17 354 23 0 0 chr2 9188131 9188174 -244068409 + (CA)n Simple_repeat Simple_repeat 2 44 0 423 279 11 49 chr2 9189235 9189418 -244067165 + (TATG)n Simple_repeat Simple_repeat 3 178 0 2127 135 7 0 chr2 9190040 9190344 -244066239 + AluSx SINE Alu 1 306 -6 709 265 109 73 chr2 9190380 9190821 -244065762 + L1MC4 LINE L1 7444 7900 -142 534 295 51 6 chr2 9191157 9191313 -244065270 + MIR SINE MIR 26 188 -74 300 239 0 28 chr2 9191376 9191458 -244065125 - MER5A DNA MER1_type -23 166 76 426 311 48 6 chr2 9191488 9191655 -244064928 + L2 LINE L2 2881 3054 -218 389 266 42 63 chr2 9191793 9191936 -244064647 - MIR SINE MIR -102 160 21 2348 93 7 3 chr2 9192023 9192325 -244064258 - AluSx SINE Alu -9 303 1 198 283 19 0 chr2 9193410 9193463 -244063120 + L2 LINE L2 2156 2209 -1105 2414 86 0 16 chr2 9193486 9193800 -244062783 + AluSx SINE Alu 1 309 -3 509 21 62 10 chr2 9193883 9193979 -244062604 + (CA)n Simple_repeat Simple_repeat 1 101 0 3857 96 26 100 chr2 9193979 9194696 -244061887 - MER4A LTR ERV1 0 664 1 240 35 0 0 chr2 9194696 9194725 -244061858 + (CA)n Simple_repeat Simple_repeat 2 30 0 330 313 104 21 chr2 9194971 9195115 -244061468 + MIR SINE MIR 22 177 -85 592 254 53 30 chr2 9195236 9195405 -244061178 + MIR SINE MIR 68 240 -22 183 300 169 53 chr2 9196064 9196401 -244060182 + L2 LINE L2 2213 2588 -726 238 191 0 0 chr2 9196439 9196486 -244060097 + MER58B DNA MER1_type 295 341 0 245 303 134 39 chr2 9196917 9197224 -244059359 - L1ME3A LINE L1 -223 5947 5612 255 247 92 53 chr2 9197310 9197472 -244059111 - L1ME3A LINE L1 -704 5452 5319 277 171 43 29 chr2 9197572 9197642 -244058941 - Charlie4 DNA MER1_type -1879 82 12 27 29 0 0 chr2 9197713 9197747 -244058836 + AT_rich Low_complexity Low_complexity 1 34 0 2043 103 19 39 chr2 9198283 9198454 -244058129 - AluJb SINE Alu -8 304 140 2386 108 0 0 chr2 9198454 9198761 -244057822 - AluSx SINE Alu -5 307 1 2043 103 19 39 chr2 9198761 9198899 -244057684 - AluJb SINE Alu -172 140 1 399 278 202 15 chr2 9198914 9199112 -244057471 - MIR SINE MIR -8 254 20 2468 75 0 3 chr2 9199608 9199914 -244056669 - AluY SINE Alu -6 305 1 201 264 99 11 chr2 9199961 9200052 -244056531 - MIR SINE MIR -12 250 152 358 202 58 18 chr2 9200618 9200746 -244055837 + MIR3 SINE MIR 60 196 -12 360 296 139 12 chr2 9201320 9201492 -244055091 + MIR3 SINE MIR 15 208 0 4596 173 54 22 chr2 9201710 9203310 -244053273 - L1MB7 LINE L1 -25 6159 4503 659 143 0 0 chr2 9203310 9203415 -244053168 - AluSg/x SINE Alu 0 312 208 280 156 0 6 chr2 9203415 9203474 -244053109 - Alu SINE Alu -268 40 1 1227 218 29 35 chr2 9203474 9203788 -244052795 - L1MB7 LINE L1 -1664 4482 4169 2292 48 44 24 chr2 9203788 9204082 -244052501 - AluY SINE Alu -5 306 7 1227 218 29 35 chr2 9204082 9204111 -244052472 - L1MB7 LINE L1 -1977 4169 4141 217 306 148 0 chr2 9206323 9206431 -244050152 + L2 LINE L2 3142 3265 -7 239 204 41 0 chr2 9206759 9206808 -244049775 + (TCCA)n Simple_repeat Simple_repeat 3 53 0 544 191 89 64 chr2 9207071 9207228 -244049355 + MER58C DNA MER1_type 43 203 -12 221 250 0 0 chr2 9208486 9208530 -244048053 + L3 LINE CR1 1532 1575 -2 218 308 63 25 chr2 9209544 9209677 -244046906 - MIR SINE MIR -65 143 18 502 326 39 11 chr2 9214527 9214705 -244041878 + L2 LINE L2 3130 3312 -1 309 283 18 53 chr2 9215585 9215698 -244040885 + MIR SINE MIR 12 120 -142 * 672 216 88 66 chr2 9215697 9215830 -244040753 - MIR SINE MIR -5 257 115 2460 96 0 0 chr2 9215830 9216133 -244040450 + AluSx SINE Alu 1 303 -9 672 216 88 66 chr2 9216133 9216226 -244040357 - MIR SINE MIR -147 115 26 276 322 67 31 chr2 9216174 9216398 -244040185 + MIR SINE MIR 7 242 -20 * 715 231 15 5 chr2 9217898 9218097 -244038486 + MER20 DNA MER1_type 19 219 0 21 0 0 0 chr2 9218628 9218649 -244037934 + AT_rich Low_complexity Low_complexity 1 21 0 205 184 0 0 chr2 9218667 9218705 -244037878 + (TATG)n Simple_repeat Simple_repeat 1 38 0 1641 146 4 4 chr2 9219321 9219575 -244037008 + AluJo SINE Alu 1 254 -58 216 359 35 78 chr2 9219644 9219725 -244036858 - L2 LINE L2 -538 2776 2693 2413 90 3 13 chr2 9219725 9220037 -244036546 + AluSg SINE Alu 1 309 -1 216 359 35 78 chr2 9220037 9220186 -244036397 - L2 LINE L2 -621 2693 2556 1229 160 9 5 chr2 9220221 9220433 -244036150 - MER4E LTR ERV1 0 779 567 * 1718 141 63 30 chr2 9220427 9220760 -244035823 - MER4B LTR ERV1 -266 344 1 268 158 368 11 chr2 9220765 9220860 -244035723 - MIR SINE MIR -66 196 68 529 193 28 0 chr2 9221892 9222001 -244034582 - MIR SINE MIR -129 133 22 2166 123 41 0 chr2 9223122 9223464 -244033119 + THE1B LTR MaLR 2 357 -7 264 273 10 30 chr2 9223529 9223628 -244032955 + MLT1K LTR MaLR 492 588 0 241 263 14 111 chr2 9224358 9224415 -244032168 + MIR SINE MIR 11 56 -152 1676 192 0 10 chr2 9224415 9224723 -244031860 - AluJo SINE Alu -7 305 1 241 263 14 111 chr2 9224723 9224786 -244031797 + MIR SINE MIR 56 124 -84 872 159 0 0 chr2 9224953 9225085 -244031498 + AluJo SINE Alu 2 133 -169 2392 89 86 9 chr2 9225099 9225437 -244031146 + THE1B LTR MaLR 1 364 0 858 160 0 75 chr2 9225439 9225585 -244030998 + AluJo SINE Alu 140 261 -174 1079 73 11 17 chr2 9225585 9225763 -244030820 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 858 160 0 75 chr2 9225763 9225926 -244030657 + AluJo SINE Alu 261 435 0 255 266 152 0 chr2 9227169 9227248 -244029335 + MIR SINE MIR 57 147 -61 2043 139 3 19 chr2 9227267 9227577 -244029006 + AluSx SINE Alu 1 305 -7 194 244 24 0 chr2 9227586 9227627 -244028956 + MIR SINE MIR 218 259 -3 2313 71 3 3 chr2 9228181 9228496 -244028087 + AluY SINE Alu 1 315 0 1935 146 3 54 chr2 9228503 9228819 -244027764 + AluSx SINE Alu 1 300 -12 2382 105 0 3 chr2 9229063 9229376 -244027207 + AluSx SINE Alu 1 312 0 1576 175 91 4 chr2 9229432 9229706 -244026877 + AluJb SINE Alu 1 298 -14 190 333 63 16 chr2 9230479 9230605 -244025978 + MIR SINE MIR 120 251 -11 242 71 0 24 chr2 9230607 9230649 -244025934 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 459 258 42 72 chr2 9230957 9231124 -244025459 - MER91B DNA MER1_type -11 179 18 1886 158 14 0 chr2 9231169 9231461 -244025122 + AluJo SINE Alu 1 296 -16 436 296 206 7 chr2 9232009 9232310 -244024273 + L2 LINE L2 2912 3272 0 459 316 56 71 chr2 9232392 9232785 -244023798 - L2 LINE L2 -508 2806 2420 2462 73 3 0 chr2 9234141 9234441 -244022142 - AluY SINE Alu -10 301 1 2103 137 20 7 chr2 9234449 9234749 -244021834 - AluJb SINE Alu -8 304 1 206 265 20 0 chr2 9235544 9235593 -244020990 + L2 LINE L2 3194 3243 -29 639 39 0 0 chr2 9235975 9236053 -244020530 + (TC)n Simple_repeat Simple_repeat 1 78 0 4946 108 3 3 chr2 9236304 9236991 -244019592 - L1PA10 LINE L1 -1 6167 5481 2150 128 10 6 chr2 9236991 9237303 -244019280 - AluSp SINE Alu 0 313 1 2091 131 3 10 chr2 9237391 9237697 -244018886 - AluSq SINE Alu -7 306 3 245 285 61 144 chr2 9237741 9238004 -244018579 - MIR SINE MIR -2 260 20 1746 157 51 40 chr2 9238074 9238133 -244018450 - L1MB8 LINE L1 -9 6169 6112 1671 194 3 7 chr2 9238133 9238443 -244018140 + AluJo SINE Alu 1 309 -3 1746 157 51 40 chr2 9238443 9238758 -244017825 - L1MB8 LINE L1 -66 6112 5791 2366 169 38 0 chr2 9238759 9239202 -244017381 + MLT1C LTR MaLR 3 462 -5 2719 149 45 79 chr2 9239202 9239517 -244017066 - L1MB8 LINE L1 -401 5783 5459 2287 117 42 28 chr2 9239517 9239728 -244016855 - THE1B LTR MaLR 0 364 144 2008 140 0 13 chr2 9239728 9240036 -244016547 + AluSc SINE Alu 1 304 -5 2287 117 42 28 chr2 9240036 9240183 -244016400 - THE1B LTR MaLR -220 144 1 2719 149 45 79 chr2 9240183 9240423 -244016160 - L1MB8 LINE L1 -725 5459 5262 2275 114 0 16 chr2 9240423 9240740 -244015843 + AluJb SINE Alu 1 312 0 2719 149 45 79 chr2 9240740 9240869 -244015714 - L1MB8 LINE L1 -922 5262 5130 282 300 9 55 chr2 9240896 9241006 -244015577 + L2 LINE L2 2642 2746 -568 583 86 43 0 chr2 9241006 9241138 -244015445 + AluJb SINE Alu 189 324 0 998 284 81 45 chr2 9241170 9241653 -244014930 + L2 LINE L2 2812 3311 -2 449 267 240 0 chr2 9241859 9242005 -244014578 - MER5A DNA MER1_type 0 189 9 329 266 55 37 chr2 9242351 9242460 -244014123 - L2 LINE L2 -4 3309 3199 253 379 121 0 chr2 9242784 9242966 -244013617 - L2 LINE L2 -179 3093 2890 1276 204 96 16 chr2 9243076 9243390 -244013193 - MER58B DNA MER1_type -2 339 1 2460 177 33 124 chr2 9243952 9244285 -244012298 + MER63C DNA MER1_type 1 226 -834 2884 13 3 0 chr2 9244285 9244598 -244011985 + AluYb8 SINE Alu 1 314 -4 2460 177 33 124 chr2 9244598 9245027 -244011556 + MER63C DNA MER1_type 226 693 -237 319 256 13 0 chr2 9245033 9245111 -244011472 + MER63C DNA MER1_type 854 932 0 192 333 0 0 chr2 9245444 9245501 -244011082 - MIR3 SINE MIR -15 193 137 2628 58 0 0 chr2 9245512 9245822 -244010761 - AluY SINE Alu -1 310 1 228 107 18 36 chr2 9246378 9246434 -244010149 + (TTCTCC)n Simple_repeat Simple_repeat 5 59 0 21 0 0 0 chr2 9246434 9246455 -244010128 + AT_rich Low_complexity Low_complexity 1 21 0 1048 219 102 29 chr2 9246455 9246770 -244009813 - MER46C DNA MER2_type 0 338 1 212 245 0 0 chr2 9248038 9248087 -244008496 + CT-rich Low_complexity Low_complexity 3 51 0 208 304 52 61 chr2 9248232 9248347 -244008236 + MIR SINE MIR 23 136 -126 25 75 0 0 chr2 9248634 9248687 -244007896 + GC_rich Low_complexity Low_complexity 1 53 0 1630 77 5 0 chr2 9248843 9249038 -244007545 + AluSp SINE Alu 104 299 -14 214 200 0 0 chr2 9249236 9249276 -244007307 + T-rich Low_complexity Low_complexity 1 40 0 254 382 49 16 chr2 9250007 9250130 -244006453 - L2 LINE L2 -21 3251 3125 201 254 127 0 chr2 9250432 9250487 -244006096 + L2 LINE L2 2433 2494 -820 384 130 101 0 chr2 9250566 9250635 -244005948 - Charlie5 DNA MER1_type -2527 85 10 269 180 20 0 chr2 9250656 9250706 -244005877 + MER5A DNA MER1_type 42 92 -97 449 265 119 13 chr2 9250772 9250923 -244005660 - MER5B DNA MER1_type -11 167 1 * 1087 263 95 39 chr2 9250923 9251555 -244005028 - L2 LINE L2 -141 3172 2496 2309 108 0 6 chr2 9252092 9252406 -244004177 - AluSx SINE Alu 0 312 1 187 351 52 0 chr2 9252550 9252627 -244003956 - L2 LINE L2 -1 3312 3232 189 0 0 0 chr2 9252644 9252665 -244003918 + (A)n Simple_repeat Simple_repeat 1 21 0 686 202 74 15 chr2 9252738 9252852 -244003731 - Charlie4 DNA MER1_type -7 1954 1848 1427 166 109 22 chr2 9252852 9253172 -244003411 - MER7A DNA MER2_type 0 346 1 686 202 74 15 chr2 9253172 9253260 -244003323 - Charlie4 DNA MER1_type -113 1848 1740 1007 180 131 37 chr2 9354301 9354545 -243902038 + AluJo SINE Alu 1 267 -45 414 0 0 0 chr2 9354577 9354623 -243901960 + (CA)n Simple_repeat Simple_repeat 1 46 0 1714 154 0 34 chr2 9355164 9355462 -243901121 - AluJo SINE Alu -24 288 1 2078 120 0 3 chr2 9355566 9355866 -243900717 - AluSq SINE Alu -14 299 1 231 190 139 63 chr2 9355917 9355996 -243900587 + MIR3 SINE MIR 102 186 -22 1749 113 68 0 chr2 9356775 9357040 -243899543 - AluSx SINE Alu -29 283 1 968 276 79 3 chr2 9357042 9357411 -243899172 - L1ME1 LINE L1 -220 5946 5550 223 293 150 30 chr2 9358490 9358623 -243897960 + MIR SINE MIR 71 219 -43 887 158 22 27 chr2 9358972 9359155 -243897428 + AluJo SINE Alu 107 288 -24 559 283 53 0 chr2 9359755 9359907 -243896676 + MIR SINE MIR 19 178 -84 2131 94 13 3 chr2 9360086 9360385 -243896198 + AluSx SINE Alu 3 304 -8 689 217 0 8 chr2 9360418 9360547 -243896036 - MER8 DNA MER2_type 0 239 112 540 275 111 19 chr2 9361414 9361621 -243894962 + MIR SINE MIR 20 245 -17 521 264 67 39 chr2 9361689 9361910 -243894673 - L1ME4a LINE L1 -18 6103 5871 1242 164 114 8 chr2 9361910 9362172 -243894411 - AluJo SINE Alu -22 290 1 521 264 67 39 chr2 9362172 9362234 -243894349 - L1ME4a LINE L1 -250 5871 5812 2174 104 16 0 chr2 9362306 9362614 -243893969 + AluSq SINE Alu 1 313 0 236 295 139 29 chr2 9362810 9363091 -243893492 - L1ME4a LINE L1 -528 5593 5282 239 250 198 10 chr2 9364855 9364951 -243891632 + MIR SINE MIR 37 150 -112 289 80 40 40 chr2 9365039 9365089 -243891494 + L1MC5 LINE L1 7740 7789 -172 830 186 11 17 chr2 9365475 9365607 -243890976 + AluJb SINE Alu 137 269 -43 1782 170 70 23 chr2 9365607 9366037 -243890546 + LTR7 LTR ERV1 1 450 0 830 186 11 17 chr2 9366037 9366081 -243890502 + AluJb SINE Alu 269 312 0 2196 96 0 3 chr2 9366740 9367033 -243889550 + AluSx SINE Alu 21 312 0 282 270 33 53 chr2 9367548 9367700 -243888883 + MER5B DNA MER1_type 30 178 0 929 164 30 0 chr2 9368436 9368601 -243887982 + AluJb SINE Alu 129 298 -14 2011 128 6 39 chr2 9368917 9369229 -243887354 - AluSx SINE Alu -10 302 1 2043 131 0 3 chr2 9369337 9369659 -243886924 - AluSx SINE Alu 0 321 1 2456 76 3 0 chr2 9370553 9370857 -243885726 + AluSg SINE Alu 1 305 -5 1637 188 20 10 chr2 9370866 9371159 -243885424 + AluJb SINE Alu 1 296 -16 2155 109 3 16 chr2 9371159 9371471 -243885112 + AluSc SINE Alu 1 308 -1 2150 112 14 3 chr2 9371480 9371776 -243884807 + AluSc SINE Alu 2 300 -9 2260 110 7 0 chr2 9372423 9372731 -243883852 + AluSx SINE Alu 2 311 -1 2406 89 7 0 chr2 9372748 9373050 -243883533 + AluSg SINE Alu 1 304 -6 2030 92 55 14 chr2 9373123 9373416 -243883167 + AluSq SINE Alu 3 307 -6 854 151 0 0 chr2 9373833 9373952 -243882631 - FLAM_C SINE Alu -24 119 1 2461 90 0 0 chr2 9374187 9374488 -243882095 + AluSx SINE Alu 3 303 -9 502 113 94 57 chr2 9375104 9375210 -243881373 - MER5A DNA MER1_type -79 110 1 899 134 25 45 chr2 9375297 9375454 -243881129 + FAM SINE Alu 18 171 -14 239 278 83 14 chr2 9376657 9376729 -243879854 + MIR SINE MIR 34 110 -152 188 279 0 0 chr2 9376854 9376897 -243879686 + L2 LINE L2 3264 3306 -7 2412 97 0 0 chr2 9376934 9377243 -243879340 - AluSg SINE Alu -1 309 1 2095 122 7 3 chr2 9377359 9377662 -243878921 + AluSx SINE Alu 1 304 -8 213 233 0 0 chr2 9377696 9377739 -243878844 - L2 LINE L2 -7 3306 3264 205 200 183 0 chr2 9377817 9377877 -243878706 - MIR SINE MIR -70 192 122 644 125 0 0 chr2 9377914 9378002 -243878581 + AluSg/x SINE Alu 201 288 -22 1949 81 49 0 chr2 9378002 9378248 -243878335 + AluSg SINE Alu 39 296 -14 314 256 64 40 chr2 9378855 9378980 -243877603 + LTR67 LTR ERVL 428 555 -2 191 36 36 0 chr2 9379268 9379296 -243877287 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2314 94 0 3 chr2 9379302 9379601 -243876982 - AluSx SINE Alu -14 298 1 1874 171 14 0 chr2 9379605 9379898 -243876685 - AluJb SINE Alu -15 297 1 1658 174 27 13 chr2 9380202 9380501 -243876082 + AluJo SINE Alu 1 303 -9 841 169 0 0 chr2 9380509 9380639 -243875944 + FLAM_C SINE Alu 1 130 -3 242 276 69 11 chr2 9380706 9380793 -243875790 + MIR SINE MIR 24 115 -93 916 127 0 28 chr2 9381164 9381306 -243875277 - FLAM_C SINE Alu -5 138 1 2431 81 0 7 chr2 9381315 9381623 -243874960 - AluY SINE Alu -5 306 1 1068 213 126 12 chr2 9381923 9382177 -243874406 + AluSg1 SINE Alu 13 295 -14 1869 128 25 75 chr2 9382483 9382804 -243873779 - AluJb SINE Alu -7 305 1 2116 127 6 22 chr2 9382808 9382989 -243873594 - AluSx SINE Alu -2 310 135 2223 102 17 0 chr2 9382989 9383284 -243873299 - AluSp SINE Alu -13 300 1 2116 127 6 22 chr2 9383284 9383417 -243873166 - AluSx SINE Alu -177 135 1 1968 143 3 13 chr2 9384245 9384381 -243872202 + AluJb SINE Alu 1 137 -175 2150 89 6 70 chr2 9384381 9384696 -243871887 + AluSx SINE Alu 1 295 -17 1968 143 3 13 chr2 9384696 9384859 -243871724 + AluJb SINE Alu 137 297 -15 315 125 21 0 chr2 9385013 9385061 -243871522 + MLT1B LTR MaLR 279 327 -63 1813 168 46 98 chr2 9385284 9385350 -243871233 - MLT1C LTR MaLR 0 467 399 1826 138 6 28 chr2 9385350 9385669 -243870914 + AluJb SINE Alu 1 312 0 1813 168 46 98 chr2 9385669 9386083 -243870500 - MLT1C LTR MaLR -68 399 12 1894 120 0 0 chr2 9386551 9386801 -243869782 - AluSx SINE Alu -62 250 1 473 133 44 23 chr2 9386834 9386923 -243869660 + L1MD3 LINE L1 7621 7794 -201 * 813 174 141 24 chr2 9386895 9387108 -243869475 + L1MB5 LINE L1 5935 6172 -2 1607 124 98 23 chr2 9387125 9387391 -243869192 - AluJo SINE Alu -26 286 1 803 166 96 3 chr2 9387412 9387439 -243869144 + L1MD3 LINE L1 7562 7585 -410 2210 112 7 0 chr2 9387439 9387735 -243868848 + AluSx SINE Alu 1 298 -14 803 166 96 3 chr2 9387735 9387914 -243868669 + L1MD3 LINE L1 7585 7995 0 1908 152 0 20 chr2 9387923 9388219 -243868364 + AluSx SINE Alu 1 290 -22 947 124 0 0 chr2 9388771 9388900 -243867683 + FLAM_C SINE Alu 5 133 0 2647 50 0 0 chr2 9389025 9389322 -243867261 + AluSc SINE Alu 3 299 -10 1050 176 126 70 chr2 9389946 9390410 -243866173 - MLT1F LTR MaLR -17 550 2 527 250 30 30 chr2 9390411 9390578 -243866005 + Charlie2 DNA MER1_type 2629 2798 -64 2286 86 3 0 chr2 9390578 9390869 -243865714 - AluY SINE Alu -19 292 1 527 250 30 30 chr2 9390869 9390901 -243865682 + Charlie2 DNA MER1_type 2797 2828 -34 1480 168 97 8 chr2 9390902 9391170 -243865413 + AluJo SINE Alu 2 293 -19 2398 86 3 0 chr2 9391171 9391474 -243865109 + AluSc SINE Alu 1 304 -5 2152 99 0 18 chr2 9391685 9391967 -243864616 + AluSq SINE Alu 1 277 -36 227 206 48 32 chr2 9392032 9392095 -243864488 - L2 LINE L2 -7 3265 3202 30 59 0 0 chr2 9393024 9393075 -243863508 + GC_rich Low_complexity Low_complexity 1 51 0 2292 92 0 3 chr2 9395378 9395671 -243860912 - AluSg SINE Alu -18 292 1 2441 89 0 3 chr2 9395747 9396061 -243860522 - AluSp SINE Alu 0 313 1 395 134 224 0 chr2 9397378 9397445 -243859138 + Tigger4(Zombi) DNA MER2_type 3 84 -2647 2317 120 78 12 chr2 9397447 9397694 -243858889 + Tigger4(Zombi) DNA MER2_type 2297 2583 -148 2467 60 0 0 chr2 9397694 9397978 -243858605 + AluY SINE Alu 1 284 -27 2317 120 78 12 chr2 9397978 9398138 -243858445 + Tigger4(Zombi) DNA MER2_type 2583 2731 0 2008 113 10 52 chr2 9398366 9398675 -243857908 - AluSx SINE Alu -16 296 1 2260 117 3 0 chr2 9398707 9399015 -243857568 + AluSx SINE Alu 1 309 -3 1757 147 51 17 chr2 9399633 9399926 -243856657 + AluJb SINE Alu 1 303 -9 2179 112 0 13 chr2 9400058 9400361 -243856222 - AluSg SINE Alu -11 299 1 204 309 32 11 chr2 9401006 9401100 -243855483 + L2 LINE L2 2599 2694 -620 1664 130 8 16 chr2 9401102 9401355 -243855228 - AluSx SINE Alu -16 296 46 1792 152 0 61 chr2 9401355 9401684 -243854899 - AluJo SINE Alu -3 309 1 225 263 150 0 chr2 9402112 9402192 -243854391 + L2 LINE L2 3216 3307 -6 229 175 0 62 chr2 9402270 9402350 -243854233 + A-rich Low_complexity Low_complexity 3 77 0 1917 129 11 4 chr2 9402458 9402737 -243853846 + AluSc SINE Alu 15 295 -14 336 327 47 57 chr2 9403237 9403330 -243853253 - L1ME4a LINE L1 -175 5946 5854 1955 149 0 13 chr2 9403330 9403638 -243852945 - AluJo SINE Alu -8 304 1 336 327 47 57 chr2 9403638 9403841 -243852742 - L1ME4a LINE L1 -267 5854 5653 2231 113 3 3 chr2 9403861 9404163 -243852420 - AluSq SINE Alu -11 302 1 894 231 16 0 chr2 9404167 9404353 -243852230 - MER5A DNA MER1_type 0 189 1 2198 94 3 7 chr2 9404608 9404905 -243851678 - AluSc SINE Alu -13 296 1 1880 113 60 0 chr2 9404926 9405192 -243851391 - AluSx SINE Alu -30 282 1 268 274 0 0 chr2 9405261 9405323 -243851260 - HAL1 LINE L1 -1868 639 578 1823 157 81 3 chr2 9405403 9405760 -243850823 - L1MA4 LINE L1 -1 6299 5915 1949 140 16 13 chr2 9406452 9406760 -243849823 + AluSx SINE Alu 1 309 -3 800 178 8 0 chr2 9407062 9407191 -243849392 - FLAM_C SINE Alu -3 130 1 1998 137 17 3 chr2 9407391 9407691 -243848892 - AluSx SINE Alu -8 304 1 2253 124 0 3 chr2 9407854 9408168 -243848415 - AluSq SINE Alu 0 313 1 1044 265 66 55 chr2 9408228 9408878 -243847705 - L1MC4a LINE L1 -743 5403 5175 409 263 85 0 chr2 9409056 9409174 -243847409 - MIR SINE MIR -133 129 2 275 329 110 21 chr2 9409521 9409717 -243846866 - MIR SINE MIR -48 214 4 2415 72 0 26 chr2 9410034 9410338 -243846245 + AluY SINE Alu 1 296 -15 883 73 0 33 chr2 9411421 9411572 -243845011 + (TCCCC)n Simple_repeat Simple_repeat 4 149 0 2137 87 45 0 chr2 9411710 9411997 -243844586 - AluY SINE Alu -11 300 1 383 298 17 36 chr2 9412074 9412230 -243844353 + MIR SINE MIR 12 161 -62 180 270 0 0 chr2 9412218 9412255 -243844328 + L2 LINE L2 3218 3254 -18 * 26 0 0 0 chr2 9413492 9413518 -243843065 + AT_rich Low_complexity Low_complexity 1 26 0 345 257 6 80 chr2 9414687 9414862 -243841721 - L1ME4a LINE L1 -109 6012 5851 1105 138 0 0 chr2 9414888 9415063 -243841520 - AluSg/x SINE Alu 0 308 134 2052 131 0 7 chr2 9415063 9415361 -243841222 - AluSc SINE Alu -13 296 1 291 200 158 11 chr2 9415534 9415629 -243840954 - MLT1J2 LTR MaLR -37 413 305 231 238 183 55 chr2 9415664 9415828 -243840755 - MLT1J1 LTR MaLR -239 207 23 2237 110 3 0 chr2 9415882 9416181 -243840402 - AluSc SINE Alu -9 300 1 2167 130 0 0 chr2 9416246 9416539 -243840044 - AluSg SINE Alu -17 293 1 1595 175 7 54 chr2 9416662 9416959 -243839624 + AluJo SINE Alu 1 283 -29 620 183 0 0 chr2 9417102 9417206 -243839377 + U13 snRNA snRNA 1 104 0 1513 183 13 50 chr2 9417331 9417632 -243838951 - AluJo SINE Alu -22 290 1 2251 114 0 0 chr2 9417730 9418028 -243838555 - AluSx SINE Alu -14 298 1 1066 104 0 0 chr2 9418028 9418162 -243838421 - AluSg SINE Alu -176 134 1 2110 138 0 0 chr2 9418195 9418493 -243838090 + AluSx SINE Alu 6 303 -9 517 290 36 44 chr2 9418606 9418854 -243837729 - L1MC4 LINE L1 -140 7902 7657 309 296 165 11 chr2 9418977 9419153 -243837430 - MIR SINE MIR -58 204 2 315 311 107 0 chr2 9419224 9419327 -243837256 + L3 LINE CR1 1461 1574 -3 3349 160 71 63 chr2 9419384 9419455 -243837128 - L1MB7 LINE L1 -9 6175 6106 207 0 0 0 chr2 9419455 9419478 -243837105 + (TG)n Simple_repeat Simple_repeat 2 24 0 1905 118 29 4 chr2 9419479 9419758 -243836825 - AluSx SINE Alu -25 287 2 3349 160 71 63 chr2 9419758 9419982 -243836601 - L1MB7 LINE L1 -78 6106 5885 2165 121 0 3 chr2 9419982 9420280 -243836303 - AluSx SINE Alu -15 297 1 3349 160 71 63 chr2 9420280 9420743 -243835840 - L1MB7 LINE L1 -299 5885 5408 365 261 59 17 chr2 9421073 9421192 -243835391 + L2 LINE L2 3190 3313 0 252 0 0 0 chr2 9422136 9422164 -243834419 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1720 129 4 0 chr2 9422167 9422407 -243834176 - AluSx SINE Alu -71 241 1 30 69 0 0 chr2 9422420 9422478 -243834105 + AT_rich Low_complexity Low_complexity 1 58 0 1983 134 0 3 chr2 9422629 9422934 -243833649 - AluSx SINE Alu 0 304 1 1120 147 0 0 chr2 9424131 9424294 -243832289 - AluSg/x SINE Alu -13 299 137 1215 117 40 85 chr2 9424876 9424956 -243831627 - Tigger2a DNA MER2_type -2274 444 362 1359 177 89 7 chr2 9424956 9425227 -243831356 - AluJo SINE Alu -19 293 1 1215 117 40 85 chr2 9425227 9425393 -243831190 - Tigger2a DNA MER2_type -2356 362 209 944 172 17 22 chr2 9425393 9425573 -243831010 + AluJo SINE Alu 121 299 -13 1002 133 96 21 chr2 9425573 9425761 -243830822 - Tigger2a DNA MER2_type -232 202 1 23 0 0 0 chr2 9425783 9425806 -243830777 + AT_rich Low_complexity Low_complexity 1 23 0 269 216 49 59 chr2 9427203 9427305 -243829278 - L1MC4a LINE L1 -1906 5902 5802 252 0 0 0 chr2 9427578 9427606 -243828977 + (CAGG)n Simple_repeat Simple_repeat 4 31 0 22 0 0 0 chr2 9427906 9427928 -243828655 + AT_rich Low_complexity Low_complexity 1 22 0 189 0 0 0 chr2 9428548 9428569 -243828014 + (T)n Simple_repeat Simple_repeat 1 21 0 850 247 133 7 chr2 9429256 9429564 -243827019 - HAL1 LINE L1 -738 1769 1423 390 287 131 48 chr2 9429567 9430034 -243826549 - MLT1L LTR MaLR 0 615 6 1797 132 0 28 chr2 9430043 9430331 -243826252 - AluSx SINE Alu -2 310 31 257 245 0 0 chr2 9430369 9430438 -243826145 + L1MC1 LINE L1 5208 5276 -870 850 137 0 8 chr2 9430438 9430562 -243826021 + AluJb SINE Alu 1 123 -189 28 0 0 0 chr2 9430562 9430590 -243825993 + AT_rich Low_complexity Low_complexity 1 28 0 1738 124 30 65 chr2 9430594 9430760 -243825823 + L1MC1 LINE L1 5266 5415 -929 748 191 0 16 chr2 9430760 9430886 -243825697 + FLAM_A SINE Alu 1 124 -9 1738 124 30 65 chr2 9430886 9431058 -243825525 + L1MC1 LINE L1 5415 5592 -752 2399 93 10 0 chr2 9431061 9431371 -243825212 - AluSq SINE Alu 0 313 1 2293 149 95 2 chr2 9431375 9431798 -243824785 + L1MC1 LINE L1 5693 6154 -179 685 169 115 8 chr2 9431808 9431938 -243824645 + FAM SINE Alu 8 151 -34 1414 140 0 18 chr2 9431941 9432163 -243824420 - AluSg/x SINE Alu -19 291 74 2306 113 0 0 chr2 9432725 9433026 -243823557 - AluSx SINE Alu -11 301 1 553 249 166 16 chr2 9433128 9433321 -243823262 - MIR SINE MIR -37 225 4 254 253 46 46 chr2 9433345 9433432 -243823151 - L2 LINE L2 -19 3253 3167 2009 125 10 29 chr2 9433715 9434026 -243822557 - AluSq SINE Alu -8 305 1 209 228 0 35 chr2 9434295 9434352 -243822231 + G-rich Low_complexity Low_complexity 2 56 0 2343 102 0 3 chr2 9435032 9435337 -243821246 + AluSg SINE Alu 1 304 -6 2289 91 3 0 chr2 9435478 9435764 -243820819 - AluSp SINE Alu -26 287 1 564 221 69 35 chr2 9436211 9436356 -243820227 - MLT1E3 LTR MaLR -2 622 473 323 253 30 64 chr2 9436505 9436521 -243820062 - MIR SINE MIR -86 122 107 2195 170 15 15 chr2 9436521 9436910 -243819673 - MLT1B LTR MaLR -1 389 1 323 253 30 64 chr2 9436910 9437011 -243819572 - MIR SINE MIR -101 107 9 1742 146 42 17 chr2 9437247 9437534 -243819049 + AluJb SINE Alu 1 294 -18 180 0 0 0 chr2 9438164 9438184 -243818399 + (T)n Simple_repeat Simple_repeat 1 20 0 198 0 0 0 chr2 9438288 9438310 -243818273 + (A)n Simple_repeat Simple_repeat 1 22 0 1656 175 27 3 chr2 9438418 9438710 -243817873 + AluJo SINE Alu 14 312 0 200 277 75 32 chr2 9438883 9438977 -243817606 - L2 LINE L2 -27 3245 3148 427 274 101 48 chr2 9440083 9440291 -243816292 + MIR SINE MIR 6 224 -38 283 253 44 22 chr2 9440671 9440762 -243815821 + MIR SINE MIR 55 147 -61 1605 181 32 0 chr2 9441024 9441301 -243815282 - AluJb SINE Alu -20 292 7 2428 64 0 7 chr2 9441337 9441633 -243814950 - AluY SINE Alu -17 294 1 1001 180 41 23 chr2 9441874 9442046 -243814537 - FAM SINE Alu 0 175 1 1668 171 46 0 chr2 9442057 9442338 -243814245 - AluJb SINE Alu -18 294 1 1233 169 106 0 chr2 9442433 9442669 -243813914 - Tigger3(Golem) DNA MER2_type -8 3021 2761 2325 105 0 0 chr2 9442811 9443115 -243813468 + AluSq SINE Alu 1 304 -9 24 0 0 0 chr2 9443570 9443594 -243812989 + AT_rich Low_complexity Low_complexity 1 24 0 2253 97 6 39 chr2 9443939 9444114 -243812469 - AluSx SINE Alu 0 302 140 2121 125 7 10 chr2 9444114 9444281 -243812302 - AluSx SINE Alu -9 303 136 2130 115 0 7 chr2 9444281 9444576 -243812007 - AluSg SINE Alu -17 293 1 2121 125 7 10 chr2 9444576 9444712 -243811871 - AluSx SINE Alu -176 136 1 2253 97 6 39 chr2 9444712 9444847 -243811736 - AluSx SINE Alu -162 140 2 2422 79 3 16 chr2 9445063 9445380 -243811203 + AluSq SINE Alu 1 313 0 1817 166 46 0 chr2 9445635 9445960 -243810623 + MER47A DNA MER2_type 27 366 0 189 0 0 0 chr2 9447628 9447649 -243808934 + (CATA)n Simple_repeat Simple_repeat 4 24 0 1706 167 13 29 chr2 9447698 9448009 -243808574 + AluJo SINE Alu 1 306 -6 290 259 80 45 chr2 9448156 9448268 -243808315 + L3 LINE CR1 1238 1353 -224 2306 100 3 0 chr2 9450561 9450862 -243805721 + AluSq SINE Alu 1 302 -11 1563 173 26 48 chr2 9450898 9451210 -243805373 + AluJo SINE Alu 1 305 -7 1981 120 7 0 chr2 9451383 9451659 -243804924 + AluSp SINE Alu 10 287 -26 22 0 0 0 chr2 9451659 9451681 -243804902 + AT_rich Low_complexity Low_complexity 1 22 0 255 325 122 57 chr2 9453867 9454202 -243802381 - L2 LINE L2 0 3272 2916 404 245 0 10 chr2 9454233 9454335 -243802248 + MER5C DNA MER1_type 55 155 -169 2266 101 3 3 chr2 9454516 9454822 -243801761 + AluSg SINE Alu 1 306 -4 380 252 56 0 chr2 9454877 9454984 -243801599 + MIR SINE MIR 149 261 -1 1943 85 114 7 chr2 9455309 9455581 -243801002 - AluSg SINE Alu -9 301 1 1522 148 13 62 chr2 9455625 9455930 -243800653 + AluJo SINE Alu 15 304 -8 40 37 0 0 chr2 9455942 9455996 -243800587 + AT_rich Low_complexity Low_complexity 1 54 0 180 0 0 0 chr2 9455996 9456016 -243800567 + (CA)n Simple_repeat Simple_repeat 2 21 0 255 61 0 0 chr2 9456049 9456082 -243800501 + (CA)n Simple_repeat Simple_repeat 2 34 0 21 36 0 0 chr2 9456324 9456352 -243800231 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr2 9457386 9457422 -243799161 + AT_rich Low_complexity Low_complexity 1 36 0 2086 129 24 0 chr2 9457495 9457790 -243798793 + AluSq SINE Alu 1 302 -11 780 177 44 19 chr2 9458773 9458931 -243797652 - AluSg/x SINE Alu -13 297 136 412 238 0 0 chr2 9458930 9459014 -243797569 - FRAM/FAM SINE Alu -101 84 1 * 2101 87 50 3 chr2 9459436 9459735 -243796848 + AluSq SINE Alu 1 313 0 2146 83 6 92 chr2 9459861 9460188 -243796395 - AluSq SINE Alu -14 299 1 2171 117 7 0 chr2 9460205 9460513 -243796070 - AluSx SINE Alu -1 311 2 417 273 43 50 chr2 9461557 9461696 -243794887 + MIR SINE MIR 2 139 -123 279 265 53 53 chr2 9462109 9462241 -243794342 + MIR SINE MIR 16 147 -61 1605 181 32 0 chr2 9462503 9462780 -243793803 - AluJb SINE Alu -20 292 7 2428 64 0 7 chr2 9462816 9463112 -243793471 - AluY SINE Alu -17 294 1 1001 180 41 23 chr2 9463353 9463525 -243793058 - FAM SINE Alu 0 175 1 1724 164 46 0 chr2 9463536 9463817 -243792766 - AluJb SINE Alu -18 294 1 1233 169 106 0 chr2 9463912 9464148 -243792435 - Tigger3(Golem) DNA MER2_type -7 3022 2762 2325 105 0 0 chr2 9464290 9464594 -243791989 + AluSq SINE Alu 1 304 -9 24 0 0 0 chr2 9465049 9465073 -243791510 + AT_rich Low_complexity Low_complexity 1 24 0 1990 98 59 0 chr2 9465416 9465703 -243790880 - AluSx SINE Alu -8 304 1 4249 146 38 122 chr2 9465747 9466154 -243790429 - MER21A LTR ERV1 -6 925 485 2179 108 27 0 chr2 9466154 9466449 -243790134 + AluSx SINE Alu 1 303 -9 4249 146 38 122 chr2 9466449 9467038 -243789545 - MER21A LTR ERV1 -446 485 13 1894 125 7 4 chr2 9467446 9467759 -243788824 - AluSq SINE Alu 0 314 1 2317 98 0 3 chr2 9467981 9468276 -243788307 - AluSq SINE Alu -14 299 6 1601 175 0 52 chr2 9468610 9468765 -243787818 - AluJo SINE Alu -24 288 153 2463 80 0 0 chr2 9468765 9469064 -243787519 - AluSg SINE Alu -11 299 1 1601 175 0 52 chr2 9469064 9469194 -243787389 - AluJo SINE Alu -159 153 18 286 218 154 13 chr2 9469940 9470018 -243786565 + L2 LINE L2 3184 3272 0 702 158 79 20 chr2 9470678 9470830 -243785753 + MER3 DNA MER1_type 1 161 -48 586 307 20 0 chr2 9470830 9471032 -243785551 + L1MB7 LINE L1 5970 6175 -9 339 232 11 21 chr2 9471102 9471197 -243785386 + L1MC5 LINE L1 7824 7917 -44 297 125 0 0 chr2 9471226 9471266 -243785317 + MER3 DNA MER1_type 160 199 -10 1845 166 27 0 chr2 9471441 9471736 -243784847 + AluJb SINE Alu 6 308 -4 27 0 0 0 chr2 9471912 9471939 -243784644 + AT_rich Low_complexity Low_complexity 1 27 0 2044 100 7 43 chr2 9471941 9472240 -243784343 - AluSx SINE Alu -24 288 1 1629 81 5 0 chr2 9472784 9472982 -243783601 + AluSc SINE Alu 1 199 -110 2306 100 3 0 chr2 9475226 9475527 -243781056 + AluSq SINE Alu 1 302 -11 1450 182 28 48 chr2 9475563 9475854 -243780729 + AluJo SINE Alu 1 285 -27 1981 120 7 0 chr2 9476046 9476322 -243780261 + AluSp SINE Alu 10 287 -26 22 0 0 0 chr2 9476322 9476344 -243780239 + AT_rich Low_complexity Low_complexity 1 22 0 255 325 122 57 chr2 9478530 9478865 -243777718 - L2 LINE L2 0 3272 2916 404 245 0 10 chr2 9478896 9478998 -243777585 + MER5C DNA MER1_type 55 155 -169 2266 101 3 3 chr2 9479179 9479485 -243777098 + AluSg SINE Alu 1 306 -4 391 243 56 0 chr2 9479540 9479647 -243776936 + MIR SINE MIR 149 261 -1 180 0 0 0 chr2 9479972 9479992 -243776591 + (T)n Simple_repeat Simple_repeat 1 20 0 1711 66 0 0 chr2 9480044 9480242 -243776341 - AluSc SINE Alu -109 200 3 997 124 0 0 chr2 9480367 9480496 -243776087 - FLAM_C SINE Alu 0 133 5 1888 152 0 20 chr2 9481048 9481344 -243775239 - AluSx SINE Alu -22 290 1 815 161 101 8 chr2 9481353 9481532 -243775051 - L1MD3 LINE L1 0 7995 7834 2193 112 7 0 chr2 9481532 9481828 -243774755 - AluSx SINE Alu -14 298 1 815 161 101 8 chr2 9481828 9481855 -243774728 - L1MD3 LINE L1 -161 7834 7562 1587 124 98 23 chr2 9481876 9482142 -243774441 + AluJo SINE Alu 1 286 -26 792 170 146 24 chr2 9482159 9482371 -243774212 - L1MB5 LINE L1 -2 6172 5935 461 148 44 23 chr2 9482343 9482432 -243774151 - L1MD3 LINE L1 -201 7794 7621 * 1827 121 4 0 chr2 9482465 9482714 -243773869 + AluSx SINE Alu 1 250 -62 1780 174 56 25 chr2 9483182 9483574 -243773009 + MLT1C LTR MaLR 12 415 -52 1799 137 6 37 chr2 9483593 9483915 -243772668 - AluJb SINE Alu 0 312 1 708 145 120 0 chr2 9485407 9485524 -243771059 + FLAM_C SINE Alu 1 131 -2 247 300 22 22 chr2 9485540 9485630 -243770953 + L1ME LINE L1 5558 5647 -474 2357 86 0 22 chr2 9485751 9486065 -243770518 - AluSq SINE Alu -6 307 1 247 264 57 89 chr2 9487296 9487576 -243769007 - L1M4 LINE L1 -644 5534 5264 374 279 107 62 chr2 9487810 9488054 -243768529 - L1M4 LINE L1 -3638 2508 2254 3772 172 41 20 chr2 9488070 9488775 -243767808 - L1MB8 LINE L1 0 6178 5459 2507 62 0 3 chr2 9488954 9489258 -243767325 + AluY SINE Alu 1 303 -8 231 114 0 0 chr2 9489526 9489561 -243767022 + (A)n Simple_repeat Simple_repeat 1 35 0 736 219 12 19 chr2 9489578 9489738 -243766845 + MER5A DNA MER1_type 28 186 -3 213 342 26 51 chr2 9489818 9489935 -243766648 - L2 LINE L2 -10 3262 3149 1698 171 3 13 chr2 9490324 9490628 -243765955 + AluJo SINE Alu 1 301 -11 234 311 185 44 chr2 9490630 9491113 -243765470 - L2 LINE L2 0 3313 2760 1947 123 7 20 chr2 9491727 9492027 -243764556 - AluSx SINE Alu -16 296 1 386 69 103 0 chr2 9496720 9496778 -243759805 - MADE1 DNA Mariner -15 65 2 1226 22 0 0 chr2 9497650 9497788 -243758795 - L1PA5 LINE L1 -271 5883 5746 2237 94 19 7 chr2 9497859 9498168 -243758415 - AluSq SINE Alu 0 313 1 1755 108 44 4 chr2 9498843 9499093 -243757490 + AluSx SINE Alu 18 277 -35 252 0 0 0 chr2 9499097 9499125 -243757458 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 576 247 149 39 chr2 9499491 9500090 -243756493 + L1MEd LINE L1 991 1641 -4488 482 203 163 0 chr2 9500449 9500572 -243756011 + MIR SINE MIR 104 245 -17 2259 97 3 0 chr2 9500675 9500965 -243755618 - AluSp SINE Alu -22 291 1 21 0 0 0 chr2 9500970 9500991 -243755592 + AT_rich Low_complexity Low_complexity 1 21 0 1896 127 11 7 chr2 9501837 9502121 -243754462 - AluSx SINE Alu -23 289 5 759 57 67 9 chr2 9505423 9505528 -243751055 + HY1 scRNA scRNA 1 111 -1 183 264 287 0 chr2 9505968 9506055 -243750528 + MIR SINE MIR 20 131 -131 866 195 99 22 chr2 9506230 9507088 -243749495 + L1M3 LINE L1 4765 5763 -420 180 0 0 0 chr2 9507109 9507129 -243749454 + (TTTTG)n Simple_repeat Simple_repeat 5 24 0 898 152 96 63 chr2 9507261 9507531 -243749052 + L1MB3 LINE L1 5108 5386 -760 2170 153 112 49 chr2 9507553 9507787 -243748796 + L1MB3 LINE L1 5499 5717 -457 2281 73 0 7 chr2 9507787 9508095 -243748488 - AluY SINE Alu 0 306 1 2170 153 112 49 chr2 9508095 9508473 -243748110 + L1MB3 LINE L1 5717 6173 -1 1713 166 42 3 chr2 9508490 9508774 -243747809 + AluJo SINE Alu 1 295 -17 2295 100 0 3 chr2 9509368 9509677 -243746906 + AluY SINE Alu 1 308 -3 2097 117 7 32 chr2 9509874 9510183 -243746400 + AluSg SINE Alu 2 302 -8 2302 88 10 0 chr2 9510200 9510497 -243746086 + AluSg SINE Alu 1 300 -10 1428 113 0 0 chr2 9510643 9510838 -243745745 + AluSg/x SINE Alu 94 288 -24 321 255 43 11 chr2 9510849 9510943 -243745640 + L1MC4a LINE L1 5376 5472 -2336 198 0 0 0 chr2 9510943 9510965 -243745618 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 885 130 23 0 chr2 9510965 9511096 -243745487 - AluSq/x SINE Alu -179 134 1 324 249 37 21 chr2 9511109 9511224 -243745359 + L1MC4a LINE L1 5475 5591 -530 439 285 75 31 chr2 9511247 9511475 -243745108 + L1MC4a LINE L1 5705 5942 -1866 1909 145 3 6 chr2 9511518 9511829 -243744754 + AluSx SINE Alu 1 310 -2 1831 161 17 7 chr2 9511948 9512246 -243744337 + AluJb SINE Alu 5 305 -7 227 170 106 0 chr2 9512423 9512470 -243744113 - L2 LINE L2 -5 3267 3216 743 278 0 0 chr2 9512601 9512774 -243743809 + MER8 DNA MER2_type 5 177 -62 330 200 46 0 chr2 9512803 9512868 -243743715 + MER8 DNA MER2_type 172 239 0 26 0 0 0 chr2 9513179 9513205 -243743378 + AT_rich Low_complexity Low_complexity 1 26 0 676 208 129 102 chr2 9513256 9513442 -243743141 + MER20B DNA MER1_type 83 262 -521 1899 148 3 10 chr2 9513442 9513739 -243742844 - AluSx SINE Alu -17 295 1 676 208 129 102 chr2 9513739 9513805 -243742778 + MER20B DNA MER1_type 262 347 -436 2088 128 0 16 chr2 9513805 9514109 -243742474 + AluSx SINE Alu 1 299 -13 676 208 129 102 chr2 9514109 9514149 -243742434 + MER20B DNA MER1_type 347 384 -399 417 239 7 49 chr2 9514466 9514608 -243741975 + FLAM_C SINE Alu 8 143 0 288 0 0 0 chr2 9514622 9514654 -243741929 + (T)n Simple_repeat Simple_repeat 1 32 0 1278 166 67 24 chr2 9514660 9514913 -243741670 + AluJo SINE Alu 6 269 -43 1549 190 45 3 chr2 9515049 9515339 -243741244 - AluJo SINE Alu -10 302 1 2056 121 7 14 chr2 9515536 9515833 -243740750 + AluSx SINE Alu 1 295 -17 2150 107 10 23 chr2 9515995 9516304 -243740279 - AluSq SINE Alu -8 305 1 14161 129 35 26 chr2 9516397 9516749 -243739834 - Tigger1 DNA MER2_type -18 2400 2053 2373 100 7 0 chr2 9516749 9517059 -243739524 - AluSp SINE Alu -1 312 1 14161 129 35 26 chr2 9517059 9519085 -243737498 - Tigger1 DNA MER2_type -365 2053 1 988 89 16 0 chr2 9519352 9519475 -243737108 + AluSp SINE Alu 1 125 -188 1737 161 94 16 chr2 9519613 9519985 -243736598 + L1MB3 LINE L1 5773 6173 -10 1770 169 42 0 chr2 9520008 9520292 -243736291 + AluJo SINE Alu 1 296 -16 1615 178 44 0 chr2 9520292 9520613 -243735970 + L1MB7 LINE L1 5827 6161 -23 1349 191 25 48 chr2 9520851 9521165 -243735418 - AluJb SINE Alu -5 307 1 630 190 0 0 chr2 9521813 9521929 -243734654 + AluSg/x SINE Alu 194 309 0 35 0 0 0 chr2 9521939 9521974 -243734609 + AT_rich Low_complexity Low_complexity 1 35 0 565 203 79 57 chr2 9523297 9523474 -243733109 + Charlie1b DNA MER1_type 11 191 -332 1483 198 100 35 chr2 9523950 9524062 -243732521 - L1ME2 LINE L1 0 6164 6061 3834 62 4 0 chr2 9524062 9524549 -243732034 + L1PA7 LINE L1 5666 6154 0 1483 198 100 35 chr2 9524549 9524946 -243731637 - L1ME2 LINE L1 -103 6061 5622 276 210 70 20 chr2 9524968 9525068 -243731515 - L1MC5 LINE L1 -52 7909 7805 318 275 211 28 chr2 9525605 9525747 -243730836 + L1ME LINE L1 5493 5660 -461 2217 99 7 0 chr2 9525843 9526151 -243730432 + AluSp SINE Alu 1 310 0 1858 144 46 0 chr2 9526338 9526622 -243729961 + AluJb SINE Alu 1 297 -15 634 232 49 22 chr2 9526843 9527028 -243729555 - MER20 DNA MER1_type 0 219 30 2138 110 14 7 chr2 9527103 9527395 -243729188 - AluSx SINE Alu -18 294 1 1421 107 0 5 chr2 9527440 9527627 -243728956 + AluSg/x SINE Alu 111 296 -16 676 279 109 5 chr2 9527907 9528108 -243728475 + MIR SINE MIR 37 258 -4 296 300 128 28 chr2 9528094 9528274 -243728309 - MIR SINE MIR -58 204 7 * 2201 95 17 7 chr2 9528788 9529082 -243727501 - AluSx SINE Alu -15 297 1 639 198 33 0 chr2 9529908 9530029 -243726554 + FLAM_C SINE Alu 9 133 -10 368 257 57 86 chr2 9530307 9530482 -243726101 + L2 LINE L2 3122 3291 -22 28 0 0 0 chr2 9532804 9532832 -243723751 + GC_rich Low_complexity Low_complexity 1 28 0 28 0 0 0 chr2 9533634 9533662 -243722921 + GC_rich Low_complexity Low_complexity 1 28 0 27 92 0 0 chr2 9533886 9533962 -243722621 + GC_rich Low_complexity Low_complexity 1 76 0 186 233 0 0 chr2 9536046 9536089 -243720494 + MIR SINE MIR 85 127 -135 909 247 20 51 chr2 9536314 9536569 -243720014 - MIR SINE MIR -3 259 13 371 305 93 55 chr2 9536820 9536957 -243719626 + MIR SINE MIR 15 160 -102 1872 160 3 7 chr2 9536957 9537245 -243719338 + AluJb SINE Alu 1 287 -25 371 305 93 55 chr2 9537245 9537346 -243719237 + MIR SINE MIR 160 256 -6 1045 238 47 63 chr2 9537862 9537985 -243718598 + MLT2C2 LTR ERVL 2 125 -339 2364 109 0 0 chr2 9537985 9538288 -243718295 - AluSx SINE Alu -9 303 1 1045 238 47 63 chr2 9538288 9538593 -243717990 + MLT2C2 LTR ERVL 125 423 -41 2246 121 0 3 chr2 9538682 9538980 -243717603 - AluSx SINE Alu -15 297 1 210 37 0 0 chr2 9539076 9539103 -243717480 + (TTTG)n Simple_repeat Simple_repeat 3 29 0 212 340 123 9 chr2 9539145 9539251 -243717332 - MIR SINE MIR -108 154 37 318 262 78 10 chr2 9539945 9540048 -243716535 - L2 LINE L2 -4 3309 3200 824 219 45 28 chr2 9541157 9541335 -243715248 + MIR SINE MIR 2 182 -80 297 351 71 51 chr2 9541383 9541733 -243714850 + L2 LINE L2 2916 3272 0 589 262 48 114 chr2 9542875 9543444 -243713139 - LTR67 LTR ERVL -8 549 19 236 242 253 33 chr2 9543788 9543879 -243712704 - L2 LINE L2 0 3272 3162 186 322 111 30 chr2 9543913 9544112 -243712471 - L2 LINE L2 -264 3049 2835 2368 81 3 3 chr2 9544136 9544434 -243712149 + AluSg SINE Alu 1 298 -12 894 135 0 8 chr2 9544516 9544649 -243711934 - FLAM_C SINE Alu -1 132 1 1300 139 17 13 chr2 9544743 9544973 -243711610 - L1MB3 LINE L1 -2 6181 5951 2376 116 0 0 chr2 9545210 9545521 -243711062 - AluSx SINE Alu -1 311 1 501 264 184 20 chr2 9545880 9546081 -243710502 + MIR SINE MIR 23 256 -6 2454 87 0 0 chr2 9546163 9546473 -243710110 - AluY SINE Alu -1 310 1 1170 46 0 0 chr2 9546476 9546607 -243709976 - AluY SINE Alu -179 132 2 243 292 15 15 chr2 9547629 9547694 -243708889 + L2 LINE L2 3237 3301 -12 2613 56 0 0 chr2 9549053 9549355 -243707228 + AluY SINE Alu 1 302 -9 260 240 56 64 chr2 9549662 9549787 -243706796 + L2 LINE L2 3137 3260 -12 385 306 68 88 chr2 9550197 9550606 -243705977 - L2 LINE L2 -46 3226 2826 449 290 16 24 chr2 9550804 9550928 -243705655 - MIR SINE MIR -63 145 23 320 333 26 0 chr2 9551751 9551865 -243704718 + MIR SINE MIR 4 120 -142 21 0 0 0 chr2 9551865 9551886 -243704697 + AT_rich Low_complexity Low_complexity 1 21 0 502 186 41 10 chr2 9551907 9552004 -243704579 + MER33 DNA MER1_type 10 109 -215 470 290 101 63 chr2 9552238 9552476 -243704107 + MIR SINE MIR 16 262 0 251 259 0 0 chr2 9552716 9552770 -243703813 - LTR33 LTR ERVL -358 163 110 1303 133 282 0 chr2 9552770 9553011 -243703572 + AluSg1 SINE Alu 1 309 0 2374 119 0 0 chr2 9553028 9553340 -243703243 + AluSx SINE Alu 1 312 0 326 243 19 19 chr2 9553340 9553440 -243703143 - LTR33 LTR ERVL -398 123 21 564 332 21 0 chr2 9553459 9553646 -243702937 + MIR3 SINE MIR 5 195 -13 1594 177 141 52 chr2 9553654 9554139 -243702444 + L1MB7 LINE L1 5359 5889 -295 7117 58 9 1 chr2 9554150 9555044 -243701539 + L1PA5 LINE L1 5254 6154 0 436 289 31 0 chr2 9555136 9555295 -243701288 + LTR33 LTR ERVL 304 467 -54 1188 141 3 0 chr2 9555341 9555726 -243700857 + (TCCA)n Simple_repeat Simple_repeat 1 386 0 213 205 0 0 chr2 9555739 9555778 -243700805 + (TCCA)n Simple_repeat Simple_repeat 1 39 0 220 267 95 103 chr2 9555815 9555931 -243700652 - L2 LINE L2 -8 3264 3150 222 118 0 0 chr2 9555976 9556010 -243700573 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 321 282 70 5 chr2 9557017 9557182 -243699401 + MIR SINE MIR 16 191 -63 191 286 143 0 chr2 9557251 9557307 -243699276 + MIR SINE MIR 87 150 -58 186 43 0 0 chr2 9557746 9557769 -243698814 + (CAGCC)n Simple_repeat Simple_repeat 1 23 0 270 250 45 0 chr2 9557833 9557921 -243698662 + CT-rich Low_complexity Low_complexity 4 95 0 635 253 125 108 chr2 9558001 9558203 -243698380 + L3 LINE CR1 1083 1280 -297 1906 134 10 7 chr2 9558203 9558493 -243698090 + AluSx SINE Alu 1 291 -21 635 253 125 108 chr2 9558493 9558761 -243697822 + L3 LINE CR1 1280 1561 -16 2284 117 3 3 chr2 9559217 9559525 -243697058 + AluSg SINE Alu 1 308 -2 1728 145 89 3 chr2 9559852 9560134 -243696449 + AluSx SINE Alu 1 306 -6 640 197 50 67 chr2 9561348 9561587 -243694996 - L1MC5 LINE L1 -64 7897 7663 1784 148 42 0 chr2 9561638 9561901 -243694682 - AluJo SINE Alu -38 274 1 414 283 47 57 chr2 9561901 9562193 -243694390 - L1MC5 LINE L1 -305 7656 7366 440 256 34 68 chr2 9562363 9562407 -243694176 + LTR16C LTR ERVL 167 211 -280 1974 149 3 3 chr2 9562407 9562727 -243693856 + AluJb SINE Alu 1 312 0 2294 110 0 0 chr2 9562735 9563021 -243693562 + AluSx SINE Alu 1 287 -20 192 40 0 0 chr2 9563021 9563046 -243693537 + (CA)n Simple_repeat Simple_repeat 2 26 0 440 256 34 68 chr2 9563051 9563173 -243693410 + LTR16C LTR ERVL 218 336 -155 23 0 0 0 chr2 9563188 9563211 -243693372 + AT_rich Low_complexity Low_complexity 1 23 0 361 261 104 8 chr2 9563273 9563407 -243693176 + LTR16C LTR ERVL 345 491 0 183 188 0 0 chr2 9563999 9564047 -243692536 + (TG)n Simple_repeat Simple_repeat 2 49 0 253 324 36 36 chr2 9564235 9564346 -243692237 + MIR SINE MIR 41 151 -111 356 202 9 64 chr2 9564550 9564659 -243691924 - LTR67 LTR ERVL -22 535 433 1837 159 0 21 chr2 9564879 9565162 -243691421 - AluJb SINE Alu -30 282 6 415 277 150 58 chr2 9565427 9565476 -243691107 + L1ME4a LINE L1 5772 5815 -306 2445 87 0 0 chr2 9565476 9565774 -243690809 - AluSx SINE Alu -14 298 1 415 277 150 58 chr2 9565774 9565984 -243690599 + L1ME4a LINE L1 5815 6055 -66 193 292 79 11 chr2 9568019 9568108 -243688475 + L2 LINE L2 2664 2758 -556 2400 107 0 3 chr2 9568610 9568920 -243687663 + AluSg SINE Alu 1 309 -1 2244 112 0 3 chr2 9570111 9570415 -243686168 + AluSx SINE Alu 1 303 -9 1886 114 0 8 chr2 9571343 9571645 -243684938 - AluSx SINE Alu 0 312 30 2320 69 7 33 chr2 9572795 9573101 -243683482 - AluY SINE Alu -13 298 1 2294 112 3 10 chr2 9573169 9573483 -243683100 - AluSx SINE Alu 0 312 1 2327 86 14 0 chr2 9574012 9574304 -243682279 + AluSx SINE Alu 1 296 -16 1946 159 14 0 chr2 9574403 9574699 -243681884 + AluJo SINE Alu 1 300 -12 5156 135 94 23 chr2 9574754 9575325 -243681258 - L1MC1 LINE L1 -9 6324 5795 2221 108 3 16 chr2 9575325 9575630 -243680953 - AluSx SINE Alu -11 301 1 5156 135 94 23 chr2 9575630 9575961 -243680622 - L1MC1 LINE L1 -538 5795 5489 2344 108 0 0 chr2 9575961 9576257 -243680326 - AluSx SINE Alu -16 296 1 5156 135 94 23 chr2 9576257 9576434 -243680149 - L1MC1 LINE L1 -844 5489 5167 2149 152 0 0 chr2 9576434 9576731 -243679852 + AluSx SINE Alu 1 297 -15 1355 153 80 90 chr2 9576780 9577081 -243679502 + AluJo SINE Alu 1 298 -14 265 232 0 61 chr2 9577253 9577335 -243679248 - MIR SINE MIR -116 92 16 1346 43 0 0 chr2 9577620 9577804 -243678779 + L1PA4 LINE L1 5983 6166 0 546 176 235 0 chr2 9578249 9578402 -243678181 - MER53 DNA DNA 0 189 1 198 323 125 67 chr2 9579406 9579719 -243676864 + L2 LINE L2 2921 3251 -21 937 189 13 13 chr2 9579976 9580135 -243676448 - FRAM SINE Alu -15 161 3 1922 134 38 3 chr2 9580149 9580439 -243676144 - AluSx SINE Alu -12 300 1 571 293 109 66 chr2 9580488 9580621 -243675962 - L1ME4a LINE L1 -296 5825 5699 2348 100 0 13 chr2 9580621 9580931 -243675652 - AluSx SINE Alu -6 306 1 571 293 109 66 chr2 9580931 9581343 -243675240 - L1ME4a LINE L1 -422 5699 5234 384 77 0 0 chr2 9581343 9581395 -243675188 + (TA)n Simple_repeat Simple_repeat 1 52 0 571 293 109 66 chr2 9581395 9581512 -243675071 - L1ME4a LINE L1 -887 5234 5124 24 0 0 0 chr2 9581616 9581640 -243674943 + AT_rich Low_complexity Low_complexity 1 24 0 2157 135 52 17 chr2 9581746 9582108 -243674475 - THE1C LTR MaLR 0 375 1 2187 152 28 6 chr2 9582212 9582567 -243674016 + MLT1A1 LTR MaLR 3 365 0 1631 162 65 23 chr2 9583083 9583391 -243673192 - MLT1A1 LTR MaLR 0 365 45 1224 161 55 14 chr2 9583391 9583749 -243672834 + LTR47A LTR ERVL 1 452 0 318 85 0 21 chr2 9583752 9583799 -243672784 - MLT1A1 LTR MaLR -328 46 1 381 309 54 46 chr2 9583850 9584078 -243672505 - MIR SINE MIR -17 245 16 1851 158 13 17 chr2 9584204 9584502 -243672081 + AluJb SINE Alu 1 297 -15 2279 79 9 32 chr2 9584920 9585235 -243671348 + AluSx SINE Alu 1 308 -4 180 125 0 0 chr2 9585279 9585311 -243671272 + (CA)n Simple_repeat Simple_repeat 1 32 0 2062 153 3 3 chr2 9585468 9585776 -243670807 - AluJb SINE Alu -4 308 1 3593 208 68 19 chr2 9585805 9586498 -243670085 + Charlie1a DNA MER1_type 5 755 -2006 2321 105 0 3 chr2 9586498 9586803 -243669780 - AluSq SINE Alu -9 304 1 3593 208 68 19 chr2 9586803 9587028 -243669555 + Charlie1a DNA MER1_type 755 968 -487 1994 111 61 0 chr2 9587029 9587308 -243669275 - AluSq SINE Alu -17 296 1 900 169 144 88 chr2 9587314 9587503 -243669080 + Charlie1a DNA MER1_type 1077 1254 -1507 1721 165 0 4 chr2 9587503 9587770 -243668813 - AluJb SINE Alu -45 267 2 900 169 144 88 chr2 9587770 9587934 -243668649 + Charlie1a DNA MER1_type 1254 1450 -5 281 279 177 44 chr2 9588307 9588421 -243668162 + MER5A DNA MER1_type 11 153 -36 2078 114 7 36 chr2 9588421 9588728 -243667855 + AluSx SINE Alu 1 298 -14 281 279 177 44 chr2 9588728 9588771 -243667812 + MER5A DNA MER1_type 153 189 0 1967 147 39 74 chr2 9589096 9589634 -243666949 - MER51A LTR ERV1 0 640 1 689 335 99 16 chr2 9589882 9590640 -243665943 + L1MEc LINE L1 1000 1820 -4576 310 335 58 36 chr2 9590758 9590982 -243665601 + L1MEc LINE L1 1940 2168 -4047 911 222 6 11 chr2 9590988 9591164 -243665419 + FAM SINE Alu 1 175 0 302 217 170 34 chr2 9591182 9591216 -243665367 - L1MC5 LINE L1 -36 7925 7897 1455 202 6 42 chr2 9591216 9591528 -243665055 + AluJo SINE Alu 1 301 -11 302 217 170 34 chr2 9591528 9591728 -243664855 - L1MC5 LINE L1 -64 7897 7659 414 299 77 58 chr2 9591728 9591787 -243664796 + L1MEc LINE L1 2181 2237 -3978 2126 140 10 0 chr2 9591787 9592095 -243664488 - AluSx SINE Alu -1 311 1 414 299 77 58 chr2 9592095 9592242 -243664341 + L1MEc LINE L1 2237 2391 -3824 1349 142 124 11 chr2 9592355 9592622 -243663961 - AluJo SINE Alu 0 312 16 1798 68 5 5 chr2 9592905 9593124 -243663459 + AluSp SINE Alu 1 219 -94 825 98 0 49 chr2 9593124 9593246 -243663337 + AluSp/q SINE Alu 188 303 -10 210 37 0 0 chr2 9593932 9593959 -243662624 + (CA)n Simple_repeat Simple_repeat 2 28 0 296 114 0 0 chr2 9594204 9594248 -243662335 + U5 snRNA snRNA 8 51 -65 314 244 344 6 chr2 9594346 9594526 -243662057 + MIR SINE MIR 21 261 -1 2385 97 13 0 chr2 9594941 9595249 -243661334 - AluSx SINE Alu 0 312 1 210 260 26 39 chr2 9596241 9596318 -243660265 + MIR3 SINE MIR 128 203 -5 189 231 0 0 chr2 9596711 9596750 -243659833 + MIR SINE MIR 91 129 -79 2278 110 0 10 chr2 9597419 9597728 -243658855 - AluSx SINE Alu -6 306 1 1402 147 107 20 chr2 9598331 9598583 -243658000 - AluJb SINE Alu -6 306 33 301 283 44 75 chr2 9598583 9598639 -243657944 - HAL1 LINE L1 -137 2370 2314 2037 93 41 10 chr2 9598639 9598930 -243657653 - AluSq SINE Alu -13 300 1 301 283 44 75 chr2 9598930 9599032 -243657551 - HAL1 LINE L1 -193 2314 2217 2237 157 95 17 chr2 9599050 9599471 -243657112 - LTR32 LTR ERVL -6 465 12 1766 286 54 26 chr2 9599483 9600156 -243656427 - HAL1 LINE L1 -310 2197 1497 2039 143 20 3 chr2 9600156 9600457 -243656126 + AluSx SINE Alu 1 306 -6 1766 286 54 26 chr2 9600457 9600580 -243656003 - HAL1 LINE L1 -1010 1497 1379 993 285 124 14 chr2 9600613 9601119 -243655464 - HAL1 LINE L1 -1832 675 114 240 224 0 0 chr2 9601119 9601186 -243655397 + (TG)n Simple_repeat Simple_repeat 1 67 0 247 265 88 0 chr2 9601186 9601254 -243655329 - HAL1 LINE L1 -2421 86 13 373 243 21 104 chr2 9601834 9601898 -243654685 - MIR3 SINE MIR 0 208 140 280 81 0 0 chr2 9601898 9601935 -243654648 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 2110 90 25 11 chr2 9601937 9602214 -243654369 - AluSq SINE Alu -32 281 1 373 243 21 104 chr2 9602214 9602290 -243654293 - MIR3 SINE MIR -69 139 77 307 313 61 17 chr2 9603141 9603256 -243653327 + MIR SINE MIR 31 150 -112 325 285 65 32 chr2 9603327 9603450 -243653133 + MIR3 SINE MIR 71 197 -11 217 372 11 11 chr2 9603456 9603550 -243653033 + MER5A DNA MER1_type 7 100 -89 307 254 106 35 chr2 9603631 9603773 -243652810 + L1M4 LINE L1 3044 3195 -2951 232 259 86 0 chr2 9603908 9603966 -243652617 + MIR SINE MIR 88 150 -112 325 285 65 32 chr2 9604037 9604160 -243652423 + MIR3 SINE MIR 71 197 -11 240 362 11 11 chr2 9604166 9604260 -243652323 + MER5A DNA MER1_type 7 100 -89 186 302 39 116 chr2 9604389 9604518 -243652065 + L2 LINE L2 2606 2724 -590 836 281 117 12 chr2 9604850 9605426 -243651157 - L1ME LINE L1 -357 5813 5175 227 309 46 26 chr2 9605501 9605653 -243650930 + L1M4 LINE L1 4786 4940 -1206 380 322 0 8 chr2 9605653 9605771 -243650812 - L1ME LINE L1 -981 5165 5049 568 255 77 16 chr2 9605857 9606104 -243650479 - L1ME LINE L1 -1098 5048 4787 392 312 105 75 chr2 9606314 9606609 -243649974 + L2 LINE L2 2883 3186 -86 593 264 156 26 chr2 9606684 9606915 -243649668 - MIR SINE MIR 0 262 2 209 309 24 57 chr2 9607638 9607761 -243648822 + MIR SINE MIR 11 129 -79 2462 78 3 0 chr2 9608122 9608429 -243648154 + AluY SINE Alu 1 308 -3 2775 102 3 0 chr2 9609109 9609472 -243647111 + THE1B LTR MaLR 1 364 0 299 185 34 134 chr2 9609547 9609666 -243646917 - MER20B DNA MER1_type -675 108 2 1894 97 89 4 chr2 9609684 9609975 -243646608 + AluSc SINE Alu 1 313 0 281 193 125 23 chr2 9610006 9610094 -243646489 - L2 LINE L2 -14 3299 3203 186 43 0 0 chr2 9611018 9611041 -243645542 + (TG)n Simple_repeat Simple_repeat 2 24 0 2281 92 7 3 chr2 9611283 9611577 -243645006 + AluSx SINE Alu 1 295 -17 411 214 296 0 chr2 9611828 9612034 -243644549 + L2 LINE L2 2509 2775 -539 189 273 23 0 chr2 9612227 9612271 -243644312 + L2 LINE L2 3265 3309 -4 2217 99 3 0 chr2 9612355 9612639 -243643944 - AluSx SINE Alu -27 285 1 376 260 107 30 chr2 9613088 9613257 -243643326 - MIR SINE MIR 0 262 81 623 338 64 7 chr2 9613276 9613696 -243642887 + LTR16B LTR ERVL 21 464 0 499 265 103 27 chr2 9613718 9614135 -243642448 + MLT1J LTR MaLR 10 511 0 616 138 26 17 chr2 9614223 9614339 -243642244 + LTR45B LTR ERV1 12 128 -361 249 200 0 0 chr2 9614379 9614434 -243642149 + LTR45B LTR ERV1 129 183 -306 2246 103 3 7 chr2 9614498 9614798 -243641785 - AluSq SINE Alu -14 299 1 860 182 120 29 chr2 9614810 9615052 -243641531 + LTR45B LTR ERV1 226 489 0 316 274 234 51 chr2 9615909 9616263 -243640320 + L2 LINE L2 2853 3271 -1 344 282 86 58 chr2 9616719 9616893 -243639690 + MIR SINE MIR 34 212 -50 784 164 0 0 chr2 9617150 9617272 -243639311 + FLAM_C SINE Alu 1 122 -21 237 33 0 0 chr2 9617272 9617302 -243639281 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 590 11 34 11 chr2 9617329 9617417 -243639166 + (CA)n Simple_repeat Simple_repeat 1 90 0 386 287 108 46 chr2 9617582 9617727 -243638856 + L1ME4a LINE L1 5211 5346 -818 2258 112 0 7 chr2 9617727 9618023 -243638560 + AluSx SINE Alu 1 294 -18 386 287 108 46 chr2 9618023 9618135 -243638448 + L1ME4a LINE L1 5346 5485 -679 2017 123 10 30 chr2 9618152 9618452 -243638131 + AluJo SINE Alu 1 294 -18 258 248 111 46 chr2 9618455 9618608 -243637975 + L1ME4a LINE L1 5579 5741 -380 236 233 67 42 chr2 9618708 9618828 -243637755 + L1ME4a LINE L1 5974 6096 -25 221 316 90 32 chr2 9619324 9619479 -243637104 + MIR SINE MIR 20 183 -79 212 333 51 0 chr2 9620016 9620094 -243636489 + MIR SINE MIR 56 137 -125 250 290 56 11 chr2 9620477 9620585 -243635998 + MIR SINE MIR 32 144 -64 1745 131 0 51 chr2 9620589 9620864 -243635719 + AluJo SINE Alu 34 294 -18 286 229 114 43 chr2 9620969 9621109 -243635474 + MIR SINE MIR 63 212 -50 2202 124 0 7 chr2 9621384 9621691 -243634892 + AluSx SINE Alu 1 305 -7 1916 99 35 3 chr2 9621921 9622205 -243634378 - AluY SINE Alu -18 293 1 2121 124 3 7 chr2 9622558 9622857 -243633726 - AluSx SINE Alu -12 300 3 1149 88 71 28 chr2 9623508 9623690 -243632893 - AluSq SINE Alu -123 190 1 2559 90 0 0 chr2 9623742 9624053 -243632530 - AluSx SINE Alu -1 311 1 339 286 51 0 chr2 9624278 9624376 -243632207 + MIR SINE MIR 119 221 -41 2301 108 0 22 chr2 9624468 9624782 -243631801 + AluSx SINE Alu 1 307 -5 244 315 110 16 chr2 9624898 9625025 -243631558 + MIR3 SINE MIR 64 202 -6 811 137 73 12 chr2 9625470 9625640 -243630943 - MSTC LTR MaLR -229 167 2 1310 137 5 0 chr2 9625691 9625895 -243630688 + MER2 DNA MER2_type 2 206 -139 1671 171 9 29 chr2 9625901 9626216 -243630367 - AluSx SINE Alu -3 309 1 21 36 0 0 chr2 9626216 9626244 -243630339 + AT_rich Low_complexity Low_complexity 1 28 0 2284 82 7 7 chr2 9626244 9626536 -243630047 + AluSx SINE Alu 7 298 -14 2021 146 37 75 chr2 9626904 9627443 -243629140 - MER51A LTR ERV1 0 640 1 776 334 98 14 chr2 9627691 9628449 -243628134 + L1MEc LINE L1 1000 1820 -4576 325 339 58 36 chr2 9628567 9628791 -243627792 + L1MEc LINE L1 1940 2168 -4047 845 222 6 11 chr2 9628797 9628973 -243627610 + FAM SINE Alu 1 175 0 289 234 170 34 chr2 9628991 9629025 -243627558 - L1MC5 LINE L1 -36 7925 7897 1401 210 10 39 chr2 9629025 9629335 -243627248 + AluJo SINE Alu 1 301 -11 289 234 170 34 chr2 9629335 9629535 -243627048 - L1MC5 LINE L1 -64 7897 7659 422 299 77 58 chr2 9629535 9629594 -243626989 + L1MEc LINE L1 2181 2237 -3978 2140 140 10 0 chr2 9629594 9629902 -243626681 - AluSx SINE Alu -1 311 1 422 299 77 58 chr2 9629902 9630049 -243626534 + L1MEc LINE L1 2237 2391 -3824 1349 142 124 11 chr2 9630162 9630429 -243626154 - AluJo SINE Alu 0 312 16 1720 78 9 5 chr2 9630709 9630927 -243625656 + AluSp SINE Alu 1 219 -94 827 98 0 49 chr2 9630927 9631049 -243625534 + AluSp/q SINE Alu 188 303 -10 210 37 0 0 chr2 9631734 9631761 -243624822 + (CA)n Simple_repeat Simple_repeat 2 28 0 294 114 0 0 chr2 9632006 9632050 -243624533 + U5 snRNA snRNA 8 51 -65 278 169 264 0 chr2 9632214 9632328 -243624255 + MIR SINE MIR 104 261 -1 261 83 0 0 chr2 9632738 9632774 -243623809 + (T)n Simple_repeat Simple_repeat 1 36 0 2213 123 8 14 chr2 9633338 9633695 -243622888 - THE1A LTR MaLR 0 355 1 2205 88 7 11 chr2 9634071 9634397 -243622186 - AluSp SINE Alu 0 325 1 198 196 22 0 chr2 9634619 9634665 -243621918 + MIR SINE MIR 47 93 -169 488 78 0 117 chr2 9634685 9634726 -243621857 - MER53 DNA DNA -5 184 140 2155 123 3 0 chr2 9634726 9635028 -243621555 + AluSx SINE Alu 1 303 -9 488 78 0 117 chr2 9635028 9635089 -243621494 - MER53 DNA DNA -49 140 94 2270 122 0 3 chr2 9635217 9635528 -243621055 + AluSq SINE Alu 1 310 -3 364 211 26 0 chr2 9635615 9635683 -243620900 - MER58A DNA MER1_type -1 223 154 614 202 54 0 chr2 9635683 9635812 -243620771 - MER58A DNA MER1_type 0 136 1 380 329 43 69 chr2 9636486 9636669 -243619914 - L2 LINE L2 -29 3284 3109 2372 166 25 52 chr2 9636669 9637192 -243619391 + LTR54 LTR ERV1 2 510 0 380 329 43 69 chr2 9637192 9637285 -243619298 - L2 LINE L2 -204 3109 3015 227 304 108 0 chr2 9637354 9637456 -243619127 - LTR33A LTR ERVL 0 523 411 2378 119 0 0 chr2 9637460 9637772 -243618811 + AluSq SINE Alu 1 312 -1 386 293 13 19 chr2 9638036 9638193 -243618390 + L1ME LINE L1 5273 5428 -2380 1024 125 82 86 chr2 9638202 9638243 -243618340 - MLT2B3 LTR ERVL 0 554 514 1788 166 17 39 chr2 9638243 9638599 -243617984 + MER7A DNA MER2_type 1 346 0 1024 125 82 86 chr2 9638599 9638789 -243617794 - MLT2B3 LTR ERVL -40 514 324 193 313 0 73 chr2 9638967 9639063 -243617520 + MIR SINE MIR 172 260 -2 269 318 11 0 chr2 9639131 9639219 -243617364 + L2 LINE L2 3183 3271 -1 217 264 41 58 chr2 9639466 9639587 -243616996 + L2 LINE L2 1580 1698 -1616 439 270 8 0 chr2 9639601 9639727 -243616856 + L2 LINE L2 2246 2372 -942 357 336 8 0 chr2 9639950 9640075 -243616508 + L1ME LINE L1 5596 5721 -449 831 271 44 4 chr2 9640246 9640497 -243616086 + MIR SINE MIR 2 262 0 324 244 61 0 chr2 9640584 9640666 -243615917 + MIR SINE MIR 96 182 -80 467 225 17 33 chr2 9640813 9640933 -243615650 - MIR3 SINE MIR -8 200 83 560 109 11 11 chr2 9641156 9641248 -243615335 + L1MA10 LINE L1 6234 6325 -9 1124 40 20 0 chr2 9641268 9641456 -243615127 + L1PA2 LINE L1 6002 6155 0 184 329 264 0 chr2 9641519 9641659 -243614924 - MIR SINE MIR -10 252 76 2016 116 36 7 chr2 9641743 9642046 -243614537 + AluJb SINE Alu 1 312 0 270 307 73 13 chr2 9642325 9642475 -243614108 - MIR3 SINE MIR -7 201 43 572 238 54 18 chr2 9642535 9642703 -243613880 + MER5B DNA MER1_type 5 178 0 2522 83 0 0 chr2 9642812 9643114 -243613469 - AluSx SINE Alu -10 302 1 321 329 37 30 chr2 9643403 9643567 -243613016 - MIR SINE MIR -78 184 20 271 270 167 24 chr2 9644351 9644477 -243612106 + MIR3 SINE MIR 18 161 -47 253 358 58 0 chr2 9644475 9644595 -243611988 + MIR3 SINE MIR 69 195 -13 * 1206 58 0 0 chr2 9645928 9646083 -243610500 + (TTCCC)n Simple_repeat Simple_repeat 3 157 0 2393 95 0 0 chr2 9646513 9646807 -243609776 + AluSx SINE Alu 1 294 -18 1839 164 0 14 chr2 9646858 9647144 -243609439 - AluJo SINE Alu -30 282 1 255 62 0 0 chr2 9647256 9647288 -243609295 - U2 snRNA snRNA -156 32 1 937 147 35 56 chr2 9647799 9647997 -243608586 - Tigger1 DNA MER2_type 0 2418 2225 1354 124 6 0 chr2 9648000 9648178 -243608405 + AluSx SINE Alu 1 179 -133 10851 128 32 35 chr2 9648181 9648362 -243608221 - Tigger1 DNA MER2_type -511 1907 1727 1533 187 29 0 chr2 9648362 9648672 -243607911 - L1PA16 LINE L1 0 6166 5848 10851 128 32 35 chr2 9648672 9649552 -243607031 - Tigger1 DNA MER2_type -691 1727 854 1726 115 186 14 chr2 9649552 9649917 -243606666 + MSTA LTR MaLR 1 428 0 10851 128 32 35 chr2 9649917 9650746 -243605837 - Tigger1 DNA MER2_type -1564 854 23 2491 58 19 22 chr2 9651266 9651579 -243605004 + AluSx SINE Alu 1 312 0 277 308 19 19 chr2 9651611 9651715 -243604868 - MIR3 SINE MIR -52 156 53 245 231 62 0 chr2 9652369 9652434 -243604149 + MER81 DNA DNA 46 114 0 876 228 113 48 chr2 9652458 9652769 -243603814 + MER58B DNA MER1_type 10 340 -1 1012 183 27 76 chr2 9653672 9653935 -243602648 - MLT1D LTR MaLR 0 505 256 211 316 0 0 chr2 9654842 9654921 -243601662 + (TG)n Simple_repeat Simple_repeat 1 79 0 251 366 0 0 chr2 9654988 9655100 -243601483 + (TG)n Simple_repeat Simple_repeat 1 112 0 478 335 12 0 chr2 9655488 9655661 -243600922 + (CAGAGA)n Simple_repeat Simple_repeat 5 179 0 241 333 62 14 chr2 9655723 9655867 -243600716 + MIR3 SINE MIR 35 185 -23 401 209 11 11 chr2 9656508 9656599 -243599984 - AluJ/FLAM SINE Alu -210 92 2 2691 49 0 0 chr2 9657067 9657372 -243599211 - AluY SINE Alu -6 305 1 560 271 98 5 chr2 9657463 9657677 -243598906 + L1MEd LINE L1 594 827 -5292 1863 164 6 31 chr2 9657693 9658011 -243598572 - AluJb SINE Alu -2 310 1 26 30 0 0 chr2 9658022 9658055 -243598528 + AT_rich Low_complexity Low_complexity 1 33 0 544 270 103 68 chr2 9658070 9658922 -243597661 + L1MEd LINE L1 852 1673 -4637 1974 143 28 0 chr2 9658922 9659209 -243597374 + AluJb SINE Alu 1 295 -17 544 270 103 68 chr2 9659209 9659386 -243597197 + L1MEd LINE L1 1673 1842 -4468 2087 144 0 0 chr2 9659386 9659684 -243596899 - AluSx SINE Alu -14 298 1 544 270 103 68 chr2 9659684 9660080 -243596503 + L1MEd LINE L1 1842 2345 -3965 24 0 0 0 chr2 9660164 9660188 -243596395 + AT_rich Low_complexity Low_complexity 1 24 0 333 316 67 84 chr2 9660541 9660898 -243595685 - L2 LINE L2 -20 3252 2902 684 187 169 21 chr2 9661606 9661973 -243594610 + LTR48 LTR ERV1 362 706 -1 1347 175 34 7 chr2 9661974 9662243 -243594340 - L1MB4 LINE L1 -317 5863 5588 475 157 122 68 chr2 9662412 9662559 -243594024 + MLT1B LTR MaLR 1 155 -235 360 194 15 0 chr2 9662562 9662629 -243593954 + MLT1B LTR MaLR 303 370 -4 1059 96 6 11 chr2 9663418 9663596 -243592987 + (TCCA)n Simple_repeat Simple_repeat 4 180 0 264 189 144 33 chr2 9663912 9664002 -243592581 - MIR SINE MIR -69 139 40 1871 128 0 7 chr2 9665218 9665492 -243591091 - AluSx SINE Alu -2 310 39 280 283 71 20 chr2 9665692 9665791 -243590792 - MIR SINE MIR -117 145 42 1949 174 52 17 chr2 9666154 9666561 -243590022 + MLT1C LTR MaLR 3 423 -44 205 286 187 0 chr2 9666609 9666700 -243589883 + MIR SINE MIR 89 196 -66 277 195 52 13 chr2 9668081 9668158 -243588425 + MIR SINE MIR 69 148 -60 190 308 125 39 chr2 9668230 9668438 -243588145 + L2 LINE L2 3030 3255 -17 243 0 0 0 chr2 9668438 9668465 -243588118 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 231 286 36 0 chr2 9669166 9669250 -243587333 - MIR SINE MIR -78 130 44 428 303 37 21 chr2 9669721 9669909 -243586674 + MIR SINE MIR 2 192 -70 269 313 55 49 chr2 9670223 9670386 -243586197 - MIR SINE MIR -71 191 28 225 230 115 44 chr2 9672661 9672774 -243583809 + MER5A DNA MER1_type 67 187 -2 * 527 158 42 0 chr2 9672687 9672782 -243583801 - MER5A DNA MER1_type -82 107 9 428 272 29 58 chr2 9672786 9672959 -243583624 + MIR SINE MIR 20 187 -75 2158 146 39 62 chr2 9672969 9673048 -243583535 - Tigger2 DNA MER2_type 0 2718 2639 1798 157 0 7 chr2 9673048 9673341 -243583242 + AluJo SINE Alu 6 296 -16 2158 146 39 62 chr2 9673341 9673694 -243582889 - Tigger2 DNA MER2_type -79 2639 2296 274 140 263 0 chr2 9673716 9673773 -243582810 - Tigger2 DNA MER2_type -2646 72 1 242 289 72 26 chr2 9673839 9673991 -243582592 - L2 LINE L2 -529 2785 2627 193 269 29 58 chr2 9674249 9674353 -243582230 + L2 LINE L2 2996 3096 -176 302 359 0 0 chr2 9674353 9674470 -243582113 + (TG)n Simple_repeat Simple_repeat 1 117 0 531 353 14 14 chr2 9676384 9676605 -243579978 - L3 LINE CR1 -819 758 538 666 287 48 5 chr2 9677186 9677374 -243579209 - MER91A DNA MER1_type 0 196 1 255 385 42 6 chr2 9679252 9679418 -243577165 + L2 LINE L2 2564 2735 -579 312 285 0 36 chr2 9679418 9679555 -243577028 + CT-rich Low_complexity Low_complexity 3 134 0 213 270 40 50 chr2 9679556 9679656 -243576927 - L2 LINE L2 -19 3253 3155 541 131 39 1 chr2 9679792 9679942 -243576641 + L1MC1 LINE L1 6148 6341 -3 294 306 92 43 chr2 9679982 9680286 -243576297 + L2 LINE L2 2832 3150 -122 2535 150 55 5 chr2 9681449 9681888 -243574695 + MER65C LTR ERV1 1 461 0 207 358 32 0 chr2 9683211 9683306 -243573277 + L3 LINE CR1 1434 1531 -46 2588 147 22 15 chr2 9684056 9684473 -243572110 - MLT1C LTR MaLR -2 465 43 2302 169 8 13 chr2 9684473 9684863 -243571720 - MLT1B LTR MaLR 0 390 3 2588 147 22 15 chr2 9684863 9684907 -243571676 - MLT1C LTR MaLR -424 43 1 408 336 99 25 chr2 9684923 9685277 -243571306 - L2 LINE L2 -1 3271 2892 309 209 187 0 chr2 9685576 9685594 -243570989 - L1MA10 LINE L1 -3 6331 6314 400 257 184 0 chr2 9685594 9685812 -243570771 - L1ME2 LINE L1 -13 6151 5894 514 236 73 37 chr2 9685839 9686046 -243570537 - L1ME2 LINE L1 -569 5597 5384 243 0 0 0 chr2 9686956 9686983 -243569600 + (TG)n Simple_repeat Simple_repeat 2 28 0 328 290 186 41 chr2 9687705 9687990 -243568593 - L2 LINE L2 -270 3043 2801 2265 102 0 10 chr2 9687990 9688303 -243568280 + AluSg SINE Alu 1 310 0 328 290 186 41 chr2 9688303 9688470 -243568113 - L2 LINE L2 -512 2801 2519 884 236 15 0 chr2 9688488 9688683 -243567900 - MER20 DNA MER1_type -21 198 1 237 339 73 0 chr2 9688685 9688809 -243567774 - L2 LINE L2 -789 2525 2393 249 283 0 0 chr2 9689671 9689731 -243566852 - L2 LINE L2 -214 3058 2999 222 200 0 0 chr2 9689939 9689989 -243566594 - L2 LINE L2 0 3313 3264 * 916 231 39 21 chr2 9689958 9690192 -243566391 - MIR SINE MIR -13 249 12 211 369 99 19 chr2 9690670 9691085 -243565498 + L2 LINE L2 2456 2903 -411 296 309 91 30 chr2 9691356 9691521 -243565062 + MIR SINE MIR 55 229 -33 249 111 205 94 chr2 9691904 9691987 -243564596 - Charlie4 DNA MER1_type -7 1954 1853 1507 205 93 37 chr2 9691987 9692362 -243564221 - MSTD LTR MaLR 0 396 1 249 111 205 94 chr2 9692362 9692395 -243564188 - Charlie4 DNA MER1_type -108 1853 1825 747 203 38 0 chr2 9692397 9692530 -243564053 + FRAM SINE Alu 9 146 -30 234 0 0 0 chr2 9692532 9692558 -243564025 + (CATA)n Simple_repeat Simple_repeat 3 28 0 826 199 33 50 chr2 9692930 9693030 -243563553 + MER45A DNA AcHobo 1 98 -1483 1803 157 7 13 chr2 9693030 9693329 -243563254 - AluJb SINE Alu -15 297 1 826 199 33 50 chr2 9693329 9693409 -243563174 + MER45A DNA AcHobo 98 178 0 1175 240 118 48 chr2 9693919 9694377 -243562206 + MLT1F1 LTR MaLR 70 559 -8 675 179 0 7 chr2 9694746 9694922 -243561661 + AluJo SINE Alu 14 221 -91 367 322 122 6 chr2 9694926 9695106 -243561477 - MIR SINE MIR -27 235 35 701 304 45 20 chr2 9696257 9696504 -243560079 - MIR SINE MIR -1 261 9 1559 248 62 12 chr2 9696579 9697011 -243559572 - MLT1C LTR MaLR -8 459 6 2048 134 0 0 chr2 9697132 9697423 -243559160 + AluSp SINE Alu 1 291 -22 584 167 28 0 chr2 9697638 9697746 -243558837 + L1MB5 LINE L1 5815 5925 -249 224 272 0 65 chr2 9698394 9698563 -243558020 + C-rich Low_complexity Low_complexity 2 159 0 674 235 65 71 chr2 9698850 9699105 -243557478 - MIR SINE MIR 0 262 12 1446 282 54 9 chr2 9699119 9699580 -243557003 - MLT1L LTR MaLR -76 539 58 401 280 49 42 chr2 9699647 9699790 -243556793 - MIR SINE MIR -81 181 38 180 77 0 0 chr2 9700172 9700198 -243556385 + (T)n Simple_repeat Simple_repeat 1 26 0 519 31 0 0 chr2 9700217 9700282 -243556301 - AluY SINE Alu -244 66 2 1149 123 0 0 chr2 9700761 9700914 -243555669 + (CCCA)n Simple_repeat Simple_repeat 1 332 0 1149 123 0 0 chr2 9700914 9701093 -243555490 + (CCCA)n Simple_repeat Simple_repeat 2 180 0 848 201 0 0 chr2 9701368 9701512 -243555071 - U4 snRNA snRNA -1 144 1 261 282 76 53 chr2 9702046 9702083 -243554500 + MIR SINE MIR 33 68 -194 2590 155 19 19 chr2 9702083 9702515 -243554068 + MSTB1 LTR MaLR 1 432 0 261 282 76 53 chr2 9702515 9702608 -243553975 + MIR SINE MIR 68 166 -96 2114 86 0 4 chr2 9703076 9703355 -243553228 + AluSq SINE Alu 25 302 -11 1732 133 21 7 chr2 9703748 9704033 -243552550 - AluSx SINE Alu -23 289 1 723 69 29 10 chr2 9704899 9705001 -243551582 - AluY SINE Alu 0 311 208 2197 92 3 13 chr2 9705695 9706000 -243550583 - AluSq SINE Alu -11 302 1 2330 171 22 10 chr2 9706000 9706349 -243550234 + MSTB LTR MaLR 6 362 -64 1705 114 15 11 chr2 9706349 9706611 -243549972 - AluSg SINE Alu -10 300 38 2330 171 22 10 chr2 9706611 9706677 -243549906 + MSTB LTR MaLR 362 426 0 2080 118 0 3 chr2 9708111 9708408 -243548175 - AluSx SINE Alu -3 309 14 253 169 0 51 chr2 9708849 9708908 -243547675 + L1MB2 LINE L1 6095 6150 -21 314 309 71 0 chr2 9708910 9708994 -243547589 + L1MC4 LINE L1 6614 6703 -1339 1756 123 42 11 chr2 9709121 9709405 -243547178 + AluSx SINE Alu 1 293 -19 2078 125 3 0 chr2 9710152 9710449 -243546134 + AluSx SINE Alu 3 300 -12 1061 127 58 0 chr2 9711278 9711467 -243545116 + AluSg/x SINE Alu 95 294 -18 1878 124 95 12 chr2 9711649 9711987 -243544596 + THE1C LTR MaLR 10 375 0 382 252 63 0 chr2 9711987 9712114 -243544469 - MIR SINE MIR -103 159 25 1181 129 46 28 chr2 9712957 9713174 -243543409 - L1PA15 LINE L1 -13 6152 5932 188 298 40 89 chr2 9713179 9713303 -243543280 + L2 LINE L2 3134 3251 -21 815 241 227 16 chr2 9713596 9713966 -243542617 - MLT1H1 LTR MaLR -62 493 46 315 238 49 112 chr2 9713972 9714115 -243542468 - MIR SINE MIR -108 154 21 1692 139 0 22 chr2 9714116 9714390 -243542193 + AluJo SINE Alu 1 268 -44 421 298 60 12 chr2 9714510 9714678 -243541905 - MER5B DNA MER1_type -2 176 1 469 202 48 90 chr2 9715015 9715203 -243541380 + L1M4 LINE L1 4408 4587 -1559 263 290 232 14 chr2 9715398 9715536 -243541047 + MER115 DNA AcHobo 218 385 -308 1041 240 43 0 chr2 9715577 9715810 -243540773 + MER115 DNA AcHobo 451 693 0 247 311 58 0 chr2 9715848 9715951 -243540632 + L2 LINE L2 2935 3043 -229 483 206 10 0 chr2 9716244 9716341 -243540242 - MER5A DNA MER1_type -80 109 12 225 320 13 0 chr2 9716603 9716681 -243539902 + MIR SINE MIR 44 122 -86 478 313 0 0 chr2 9716794 9716925 -243539658 - MIR SINE MIR -21 241 111 3359 149 15 11 chr2 9717013 9717542 -243539041 - LTR26B LTR ERV1 0 531 1 230 320 107 27 chr2 9717824 9717974 -243538609 + L2 LINE L2 3082 3243 -29 255 180 66 0 chr2 9718220 9718281 -243538302 + CT-rich Low_complexity Low_complexity 2 66 0 332 265 12 0 chr2 9718308 9718391 -243538192 + MIR SINE MIR 82 165 -97 512 30 15 0 chr2 9718677 9718743 -243537840 + (TGAA)n Simple_repeat Simple_repeat 4 70 0 2148 92 7 29 chr2 9720373 9720679 -243535904 + AluSx SINE Alu 1 299 -13 1143 138 0 11 chr2 9721979 9722160 -243534423 - AluSp SINE Alu -1 312 134 2112 100 38 0 chr2 9722161 9722451 -243534132 - AluSq SINE Alu -10 303 3 1210 170 59 95 chr2 9722465 9722485 -243534098 + MLT1B LTR MaLR 1 20 -370 2190 178 3 11 chr2 9722485 9722851 -243533732 + MLT1A1 LTR MaLR 1 363 -2 1210 170 59 95 chr2 9722851 9723159 -243533424 + MLT1B LTR MaLR 20 313 -77 1058 172 91 5 chr2 9723185 9723406 -243533177 + MLT2C2 LTR ERVL 215 454 -10 212 0 0 35 chr2 9724090 9724119 -243532464 + (CCTG)n Simple_repeat Simple_repeat 2 29 0 195 279 162 0 chr2 9724162 9724230 -243532353 + L2 LINE L2 2716 2794 -520 185 193 0 18 chr2 9727983 9728040 -243528543 + (CA)n Simple_repeat Simple_repeat 2 57 0 2073 84 39 0 chr2 9728699 9728983 -243527600 + AluSc SINE Alu 1 295 -14 213 39 0 0 chr2 9729129 9729155 -243527428 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1928 121 3 0 chr2 9729158 9729440 -243527143 - AluSx SINE Alu -29 283 1 887 265 90 15 chr2 9729761 9730173 -243526410 + MLT1C LTR MaLR 7 449 -18 2214 106 0 0 chr2 9730962 9731330 -243525253 + AluSq SINE Alu 1 368 0 231 114 0 0 chr2 9734514 9734549 -243522034 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 411 21 0 0 chr2 9734686 9734734 -243521849 + (TG)n Simple_repeat Simple_repeat 1 48 0 186 71 0 0 chr2 9734736 9734764 -243521819 + (GA)n Simple_repeat Simple_repeat 2 29 0 1658 98 0 45 chr2 9734777 9735022 -243521561 - AluSq SINE Alu -79 234 1 1586 188 24 3 chr2 9735215 9735507 -243521076 - AluJb SINE Alu -14 298 1 2059 95 0 7 chr2 9735590 9735874 -243520709 + AluSq SINE Alu 1 282 -31 1406 225 186 19 chr2 9735874 9736346 -243520237 + L1ME3A LINE L1 5592 6142 -28 406 256 47 16 chr2 9736439 9736568 -243520015 + MLT1J2 LTR MaLR 253 385 -65 198 103 0 0 chr2 9736603 9736632 -243519951 + (GGGA)n Simple_repeat Simple_repeat 4 32 0 1041 224 103 38 chr2 9736765 9737162 -243519421 + L1MC4a LINE L1 5804 6226 -1582 313 123 92 15 chr2 9737194 9737259 -243519324 - MLT1C LTR MaLR -217 250 181 818 93 0 60 chr2 9737296 9737316 -243519267 - AluJo/FRAM SINE Alu 0 312 292 2792 16 0 0 chr2 9737316 9737634 -243518949 - AluYb8 SINE Alu 0 318 1 818 93 0 60 chr2 9737634 9737763 -243518820 - AluJo/FRAM SINE Alu -20 292 172 210 262 36 83 chr2 9738306 9738390 -243518193 - MIR SINE MIR -60 148 69 204 139 0 47 chr2 9738529 9738572 -243518011 + (CGGGGG)n Simple_repeat Simple_repeat 2 42 0 304 357 108 9 chr2 9738575 9738788 -243517795 + MIR SINE MIR 16 249 -13 253 208 57 0 chr2 9738994 9739047 -243517536 - MER2 DNA MER2_type -24 321 266 34 34 0 17 chr2 9739047 9739077 -243517506 + AT_rich Low_complexity Low_complexity 1 31 -27 2277 86 0 3 chr2 9739077 9739380 -243517203 - AluSq SINE Alu -5 308 7 34 34 0 17 chr2 9739380 9739408 -243517175 + AT_rich Low_complexity Low_complexity 31 58 0 1511 176 10 19 chr2 9739408 9739715 -243516868 + AluSx SINE Alu 1 304 -8 1372 137 5 0 chr2 9739729 9739933 -243516650 - MER2 DNA MER2_type -139 206 2 850 136 73 12 chr2 9739984 9740154 -243516429 + MSTC LTR MaLR 2 167 -229 262 315 110 16 chr2 9740599 9740726 -243515857 - MIR3 SINE MIR -6 202 64 2138 108 0 22 chr2 9740842 9741156 -243515427 - AluSx SINE Alu -5 307 1 374 280 50 0 chr2 9741248 9741348 -243515235 - MIR SINE MIR -41 221 117 2393 88 0 0 chr2 9741571 9741879 -243514704 + AluSx SINE Alu 1 308 -4 1913 102 47 0 chr2 9741934 9742209 -243514374 + AluSq SINE Alu 1 288 -25 303 28 0 0 chr2 9742212 9742248 -243514335 + (TAAAA)n Simple_repeat Simple_repeat 5 40 0 301 253 42 21 chr2 9742678 9742773 -243513810 + MIR SINE MIR 52 148 -60 21 0 0 0 chr2 9743566 9743587 -243512996 + AT_rich Low_complexity Low_complexity 1 21 0 425 288 101 42 chr2 9743828 9743979 -243512604 - L1ME4a LINE L1 -4 6117 5976 2266 110 0 0 chr2 9743979 9744289 -243512294 - AluSg SINE Alu 0 310 1 425 288 101 42 chr2 9744289 9744425 -243512158 - L1ME4a LINE L1 -145 5976 5813 285 75 0 0 chr2 9744841 9744881 -243511702 + (TC)n Simple_repeat Simple_repeat 2 41 0 204 40 0 0 chr2 9744881 9744906 -243511677 + (CA)n Simple_repeat Simple_repeat 1 25 0 2998 205 55 40 chr2 9744918 9745145 -243511438 + L1ME1 LINE L1 4415 4637 -1529 738 179 7 57 chr2 9745145 9745285 -243511298 + FLAM_C SINE Alu 1 133 0 2998 205 55 40 chr2 9745285 9745915 -243510668 + L1ME1 LINE L1 4637 5299 -867 2127 114 10 0 chr2 9745915 9746214 -243510369 + AluSx SINE Alu 1 302 -10 2998 205 55 40 chr2 9746214 9746502 -243510081 + L1ME1 LINE L1 5299 5581 -585 1719 127 6 74 chr2 9746509 9746832 -243509751 + AluJo SINE Alu 6 306 -6 512 183 16 0 chr2 9746851 9746977 -243509606 + GA-rich Low_complexity Low_complexity 3 130 0 1480 229 89 4 chr2 9746977 9747479 -243509104 + L1ME1 LINE L1 5567 6155 -11 204 174 130 0 chr2 9747674 9747720 -243508863 - L2 LINE L2 -1072 2242 2191 558 266 128 63 chr2 9747767 9748289 -243508294 - HAL1 LINE L1 -229 2278 1723 2097 97 4 0 chr2 9748289 9748605 -243507978 - AluSg SINE Alu 0 317 1 270 252 109 25 chr2 9748938 9749057 -243507526 + MIR SINE MIR 16 144 -64 437 283 58 52 chr2 9749668 9749859 -243506724 - MIR SINE MIR -50 212 21 2103 261 220 10 chr2 9750114 9751135 -243505448 + L2 LINE L2 1560 2795 -519 23 33 0 0 chr2 9751204 9751234 -243505349 + AT_rich Low_complexity Low_complexity 1 30 0 2194 112 0 0 chr2 9751286 9751590 -243504993 + AluSx SINE Alu 1 304 -8 6950 118 23 23 chr2 9751684 9752744 -243503839 + L1MA2 LINE L1 4342 5411 -893 1995 99 3 11 chr2 9752744 9753048 -243503535 + AluSc SINE Alu 1 302 0 6950 118 23 23 chr2 9753048 9753942 -243502641 + L1MA2 LINE L1 5411 6304 0 283 278 211 23 chr2 9754427 9754560 -243502023 + MIR SINE MIR 105 262 0 2259 101 3 0 chr2 9755189 9755496 -243501087 - AluSx SINE Alu -4 308 1 1818 249 94 50 chr2 9755730 9756021 -243500562 + Charlie7 DNA MER1_type 984 1261 -1351 2501 50 0 0 chr2 9756021 9756323 -243500260 + AluY SINE Alu 1 302 -9 1818 249 94 50 chr2 9756323 9756789 -243499794 + Charlie7 DNA MER1_type 1261 1774 -838 781 221 181 18 chr2 9756810 9757136 -243499447 + L2 LINE L2 1202 1580 -1734 871 120 8 23 chr2 9757140 9757273 -243499310 - THE1B LTR MaLR 0 364 234 318 227 6 3 chr2 9757272 9757337 -243499246 - AluJ/monomer SINE Alu -249 53 1 * 1376 276 56 26 chr2 9757338 9757550 -243499033 - L1P LINE L1 -743 5403 5199 1592 173 20 7 chr2 9757550 9757850 -243498733 - AluJo SINE Alu -8 304 1 1376 276 56 26 chr2 9757850 9758135 -243498448 - L1P LINE L1 -947 5199 4888 1779 149 3 23 chr2 9758135 9758437 -243498146 + AluSx SINE Alu 15 310 -2 1376 276 56 26 chr2 9758437 9758579 -243498004 - L1P LINE L1 -1258 4888 4752 1330 185 49 28 chr2 9758623 9758909 -243497674 - AluJb SINE Alu 0 312 21 792 229 6 113 chr2 9758912 9759193 -243497390 - L1M4 LINE L1 -2310 3836 3593 1764 149 3 14 chr2 9759193 9759488 -243497095 - AluSx SINE Alu -3 309 18 792 229 6 113 chr2 9759488 9759533 -243497050 - L1M4 LINE L1 -2553 3593 3545 1888 121 36 0 chr2 9759534 9759815 -243496768 + AluSg SINE Alu 1 291 -19 325 268 0 0 chr2 9759822 9759904 -243496679 - L1M4 LINE L1 -2761 3385 3304 692 203 62 0 chr2 9759954 9760082 -243496501 - FRAM SINE Alu -41 135 1 232 241 36 0 chr2 9760083 9760166 -243496417 - L1M4 LINE L1 -2884 3262 3177 1905 105 0 0 chr2 9760185 9760442 -243496141 + AluSx SINE Alu 1 257 -55 578 205 0 8 chr2 9760442 9760553 -243496030 - AluSq/x SINE Alu -195 118 9 744 301 60 25 chr2 9760681 9760963 -243495620 + L2 LINE L2 3021 3312 -1 664 117 63 0 chr2 9761044 9761155 -243495428 - FLAM_C SINE Alu -23 120 3 211 277 161 9 chr2 9761177 9761289 -243495294 - MIR3 SINE MIR -69 139 11 1705 150 3 26 chr2 9762334 9762641 -243493942 - AluJo SINE Alu -12 300 1 337 242 33 44 chr2 9762892 9762983 -243493600 + L2 LINE L2 3183 3272 0 2101 108 3 3 chr2 9763884 9764181 -243492402 + AluSx SINE Alu 1 297 -15 200 267 208 10 chr2 9764314 9764415 -243492168 - MIR3 SINE MIR -85 123 3 478 178 0 11 chr2 9764697 9764787 -243491796 + L1MEc LINE L1 35 123 -6273 633 289 73 34 chr2 9764794 9765175 -243491408 - Charlie1a DNA MER1_type -964 491 96 289 214 155 0 chr2 9765940 9766024 -243490559 - L1ME4a LINE L1 -3 6118 6022 2196 100 3 0 chr2 9766568 9766867 -243489716 + AluSp SINE Alu 1 300 -13 226 238 88 25 chr2 9767307 9767387 -243489196 - L2 LINE L2 -2 3311 3227 21 0 0 0 chr2 9768190 9768211 -243488372 + AT_rich Low_complexity Low_complexity 1 21 0 261 0 0 0 chr2 9768211 9768240 -243488343 + (TG)n Simple_repeat Simple_repeat 2 30 0 194 271 21 0 chr2 9768488 9768536 -243488047 + MIR SINE MIR 101 149 -113 199 347 14 0 chr2 9768999 9769071 -243487512 + MIR SINE MIR 161 233 -29 913 207 35 0 chr2 9770265 9770439 -243486144 - MER5A DNA MER1_type 0 189 10 1811 159 0 0 chr2 9770680 9770975 -243485608 - AluSx SINE Alu -17 295 1 306 301 147 44 chr2 9771455 9771591 -243484992 + MIR SINE MIR 25 174 -88 1731 165 26 3 chr2 9771641 9771944 -243484639 - AluJb SINE Alu -2 310 1 293 333 93 13 chr2 9771978 9772128 -243484455 + MIR3 SINE MIR 30 191 -17 380 115 0 0 chr2 9772227 9772279 -243484304 + MER5A DNA MER1_type 138 189 0 29 28 0 0 chr2 9772903 9772939 -243483644 + AT_rich Low_complexity Low_complexity 1 36 0 186 268 0 0 chr2 9772976 9773017 -243483566 + L2 LINE L2 3007 3047 -225 2238 99 0 6 chr2 9773164 9773478 -243483105 - AluSq SINE Alu -1 312 1 2006 127 19 61 chr2 9773504 9773592 -243482991 - MER47A DNA MER2_type -1957 366 276 1849 149 7 21 chr2 9773592 9773880 -243482703 + AluJo SINE Alu 13 296 -16 2006 127 19 61 chr2 9773880 9774153 -243482430 - MER47A DNA MER2_type -2047 276 20 272 267 110 27 chr2 9775220 9775366 -243481217 - L2 LINE L2 -188 3125 2968 254 211 239 55 chr2 9775363 9775472 -243481111 + MER5A DNA MER1_type 61 189 0 * 1701 189 116 193 chr2 9775472 9775744 -243480839 - L2 LINE L2 -702 2612 2320 1651 150 44 78 chr2 9775744 9776130 -243480453 - THE1C LTR MaLR -2 373 1 9746 115 19 46 chr2 9776130 9777570 -243479013 - THE1C-int LTR MaLR 0 1580 189 1928 161 7 3 chr2 9777570 9777869 -243478714 - AluSx SINE Alu -12 300 1 9746 115 19 46 chr2 9777869 9778051 -243478532 - THE1C-int LTR MaLR -1391 189 3 1908 126 60 30 chr2 9778053 9778417 -243478166 - THE1C LTR MaLR 0 375 1 1701 189 116 193 chr2 9778417 9778525 -243478058 - L2 LINE L2 -994 2320 2205 659 193 0 7 chr2 9778525 9778665 -243477918 - MER104 DNA Tc2 -7 173 35 1701 189 116 193 chr2 9778665 9779142 -243477441 - L2 LINE L2 -1109 2205 1688 41965 40 3 1 chr2 9779146 9785277 -243471306 + L1PA4 LINE L1 2 6149 -6 792 241 67 22 chr2 9785277 9785547 -243471036 - L2 LINE L2 -1612 1702 1421 210 333 12 12 chr2 9786637 9786721 -243469862 - MIR3 SINE MIR -16 192 109 2218 110 0 0 chr2 9787381 9787705 -243468878 - AluSg SINE Alu 0 324 1 2114 120 14 0 chr2 9787776 9788067 -243468516 + AluSx SINE Alu 1 295 -17 35 88 0 0 chr2 9788217 9788308 -243468275 + AT_rich Low_complexity Low_complexity 1 91 0 1630 170 14 14 chr2 9788395 9788683 -243467900 + AluJb SINE Alu 9 296 -16 1029 231 128 79 chr2 9788713 9789257 -243467326 - HAL1 LINE L1 -110 2397 1814 2316 94 0 10 chr2 9789257 9789564 -243467019 - AluY SINE Alu -7 304 1 1029 231 128 79 chr2 9789564 9789678 -243466905 - HAL1 LINE L1 -693 1814 1707 2136 255 83 45 chr2 9789722 9790228 -243466355 - HAL1 LINE L1 -1604 903 349 2219 113 3 0 chr2 9790228 9790528 -243466055 + AluY SINE Alu 1 301 -10 2136 255 83 45 chr2 9790528 9790891 -243465692 - HAL1 LINE L1 -2158 349 1 410 184 8 5 chr2 9790987 9791119 -243465464 - MER5A DNA MER1_type 0 189 1 337 296 81 6 chr2 9791147 9791319 -243465264 - L1ME LINE L1 -317 5804 5620 505 228 101 7 chr2 9791337 9791486 -243465097 - L2 LINE L2 -32 3281 3119 1998 274 72 32 chr2 9791550 9792263 -243464320 + L2 LINE L2 2120 2860 -454 461 86 0 14 chr2 9792277 9792347 -243464236 - THE1B LTR MaLR -53 311 243 844 231 156 60 chr2 9792383 9792626 -243463957 + L2 LINE L2 2871 3089 -224 758 173 16 0 chr2 9792626 9792753 -243463830 - FLAM_A SINE Alu -4 129 1 844 231 156 60 chr2 9792753 9792912 -243463671 + L2 LINE L2 3089 3312 -1 2142 112 20 20 chr2 9793141 9793446 -243463137 - AluSx SINE Alu -7 305 1 2544 113 6 6 chr2 9793590 9793954 -243462629 - THE1B LTR MaLR 0 364 1 183 286 162 32 chr2 9794356 9794510 -243462073 + MIR SINE MIR 89 262 0 1004 232 46 13 chr2 9794859 9795096 -243461487 + MIR SINE MIR 18 262 0 1083 299 84 32 chr2 9795312 9795838 -243460745 + L2 LINE L2 2174 2726 -588 218 189 0 19 chr2 9796003 9796056 -243460527 + CT-rich Low_complexity Low_complexity 1 52 0 777 224 13 13 chr2 9796241 9796397 -243460186 + MER5A DNA MER1_type 6 161 -28 652 166 14 90 chr2 9796425 9796570 -243460013 - AluJo SINE Alu -178 134 1 206 205 0 0 chr2 9796570 9796609 -243459974 + MER5A DNA MER1_type 151 189 0 864 300 84 33 chr2 9796829 9796982 -243459601 - L2 LINE L2 -2 3311 3167 366 83 250 0 chr2 9796982 9797042 -243459541 - MADE1 DNA Mariner -3 77 3 864 300 84 33 chr2 9797042 9797219 -243459364 - L2 LINE L2 -146 3167 3000 2547 200 33 13 chr2 9797219 9797758 -243458825 - MER44D DNA MER2_type 0 605 1 864 300 84 33 chr2 9797758 9797942 -243458641 - L2 LINE L2 -313 3000 2776 541 182 53 28 chr2 9797943 9798093 -243458490 - L1ME2 LINE L1 0 6165 6020 708 221 121 26 chr2 9798111 9798345 -243458238 - L2 LINE L2 -550 2764 2505 181 306 94 24 chr2 9798345 9798430 -243458153 - MER5C DNA MER1_type 0 324 234 225 0 0 0 chr2 9798609 9798634 -243457949 + (T)n Simple_repeat Simple_repeat 1 25 0 2076 125 7 14 chr2 9799234 9799530 -243457053 + AluSx SINE Alu 1 294 -18 692 258 44 18 chr2 9799701 9799926 -243456657 + L2 LINE L2 3083 3313 0 183 322 128 35 chr2 9800004 9800231 -243456352 - L2 LINE L2 -47 3225 2978 2119 79 23 0 chr2 9800292 9800558 -243456025 - AluSg SINE Alu -16 294 23 325 286 0 0 chr2 9800559 9800636 -243455947 - FLAM_A SINE Alu -50 83 7 21 0 0 0 chr2 9801131 9801152 -243455431 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 9801285 9801306 -243455277 + AT_rich Low_complexity Low_complexity 1 21 0 4459 172 29 14 chr2 9802064 9802951 -243453632 - MER52A LTR ERV1 0 1755 881 347 171 0 80 chr2 9802949 9803037 -243453546 + MER52A LTR ERV1 125 205 -1550 * 265 316 51 35 chr2 9803338 9803539 -243453044 + MIR SINE MIR 32 230 -32 402 291 29 0 chr2 9804120 9804223 -243452360 - MIR3 SINE MIR -6 202 97 274 119 0 0 chr2 9804478 9804520 -243452063 - tRNA-Cys-TGC tRNA tRNA -31 44 3 2364 83 0 0 chr2 9804967 9805257 -243451326 + AluSc SINE Alu 1 290 -19 1468 217 70 9 chr2 9805499 9806016 -243450567 - L1MEc LINE L1 -3563 2652 2141 1113 179 21 56 chr2 9806018 9806252 -243450331 - AluJo SINE Alu 0 312 87 4282 264 89 21 chr2 9806252 9806973 -243449610 - L1MEc LINE L1 -4248 2148 1478 2321 103 6 3 chr2 9806973 9807285 -243449298 - AluSq SINE Alu 0 313 1 4282 264 89 21 chr2 9807285 9808543 -243448040 - L1MEc LINE L1 -4918 1478 34 3367 145 104 17 chr2 9808800 9808956 -243447627 - L1MA7 LINE L1 -2 6289 6148 2267 94 0 3 chr2 9808956 9809254 -243447329 - AluSp SINE Alu -16 297 1 3367 145 104 17 chr2 9809254 9809281 -243447302 - L1MA7 LINE L1 -143 6148 6125 4141 168 56 92 chr2 9809281 9810557 -243446026 + Tigger3b DNA MER2_type 1 1230 -1 3367 145 104 17 chr2 9810557 9811123 -243445460 - L1MA7 LINE L1 -166 6125 5474 440 203 4 144 chr2 9811281 9811517 -243445066 - L1MC4 LINE L1 -3 8039 7837 453 241 46 18 chr2 9811554 9811725 -243444858 + L1ME3 LINE L1 5721 5895 -284 1013 128 7 7 chr2 9811725 9811874 -243444709 + AluJb SINE Alu 137 285 -27 302 338 85 52 chr2 9811876 9812148 -243444435 + L1ME3A LINE L1 5860 6140 -30 2093 134 0 3 chr2 9813400 9813699 -243442884 + AluJb SINE Alu 1 298 -14 207 0 0 0 chr2 9813996 9814019 -243442564 + (T)n Simple_repeat Simple_repeat 1 23 0 198 0 0 0 chr2 9814803 9814825 -243441758 + (A)n Simple_repeat Simple_repeat 1 22 0 490 272 83 18 chr2 9816361 9816530 -243440053 - MER5A DNA MER1_type -1 188 9 2123 154 25 18 chr2 9817173 9817570 -243439013 - L1MB3 LINE L1 0 6183 5784 901 185 100 0 chr2 9817643 9817843 -243438740 - L1MB3 LINE L1 -392 5791 5572 314 255 121 25 chr2 9817849 9818006 -243438577 - L1ME4a LINE L1 -1 6120 5949 226 315 27 27 chr2 9818010 9818156 -243438427 - L1ME4a LINE L1 -196 5925 5780 325 276 105 13 chr2 9818157 9818309 -243438274 + L1ME4a LINE L1 5738 5903 -218 374 314 189 30 chr2 9818369 9818434 -243438149 - L2 LINE L2 -561 2753 2700 1967 167 0 6 chr2 9818434 9818745 -243437838 + AluJb SINE Alu 1 309 -3 374 314 189 30 chr2 9818745 9819086 -243437497 - L2 LINE L2 -614 2700 2282 307 250 76 8 chr2 9819123 9819255 -243437328 + L1ME4a LINE L1 5974 6114 -7 271 225 0 50 chr2 9819270 9819367 -243437216 + L1ME4a LINE L1 5692 5771 -350 21 36 0 0 chr2 9819437 9819465 -243437118 + AT_rich Low_complexity Low_complexity 1 28 0 1753 235 56 43 chr2 9820420 9821025 -243435558 - L1ME3A LINE L1 0 6170 5558 2314 57 0 3 chr2 9821262 9821568 -243435015 - AluY SINE Alu 0 305 1 4328 116 49 1 chr2 9822295 9822970 -243433613 - L1PA15 LINE L1 0 6165 5459 24 0 0 0 chr2 9824035 9824059 -243432524 + AT_rich Low_complexity Low_complexity 1 24 0 321 306 65 51 chr2 9824646 9824862 -243431721 + L1MC1 LINE L1 5679 5897 -436 263 244 79 8 chr2 9824908 9825035 -243431548 + L1ME4a LINE L1 5968 6103 -18 1745 177 0 37 chr2 9825071 9825370 -243431213 - AluJo SINE Alu -24 288 1 226 220 44 132 chr2 9826010 9826101 -243430482 - MIR SINE MIR -111 97 15 2353 80 0 6 chr2 9826216 9826529 -243430054 - AluY SINE Alu 0 311 1 296 191 0 0 chr2 9826774 9826821 -243429762 + L2 LINE L2 3218 3264 -8 240 240 0 0 chr2 9827109 9827159 -243429424 + L2 LINE L2 3263 3312 -1 262 253 32 121 chr2 9827543 9827733 -243428850 - L2 LINE L2 -230 3042 2870 1033 224 18 23 chr2 9827878 9828097 -243428486 - MIR SINE MIR -40 222 5 399 203 98 41 chr2 9828305 9828428 -243428155 - MIR SINE MIR -63 145 28 234 266 8 113 chr2 9830047 9830171 -243426412 + L2 LINE L2 2926 3036 -236 266 282 14 0 chr2 9830320 9830391 -243426192 + MIR SINE MIR 183 254 -8 282 293 41 49 chr2 9830404 9830527 -243426056 + L2 LINE L2 3151 3272 0 215 373 0 0 chr2 9830685 9830744 -243425839 + L3 LINE CR1 1504 1562 -15 539 208 0 0 chr2 9831588 9831694 -243424889 - L1MD3 LINE L1 -158 7837 7732 338 263 25 24 chr2 9831966 9832080 -243424503 + MIR SINE MIR 9 130 -78 283 109 91 0 chr2 9833348 9833403 -243423180 - L1MC/D LINE L1 -897 5462 5403 2900 214 110 10 chr2 9833417 9834406 -243422177 + L1ME1 LINE L1 5072 6158 -8 2130 98 6 28 chr2 9835011 9835328 -243421255 - AluSp SINE Alu -3 310 1 221 296 56 0 chr2 9835643 9835697 -243420886 - L2 LINE L2 -13 3300 3244 222 330 97 10 chr2 9835825 9835928 -243420655 - L2 LINE L2 -2 3270 3159 199 236 135 67 chr2 9835930 9835973 -243420610 - MIR3 SINE MIR -105 103 64 2680 10 0 0 chr2 9835973 9836272 -243420311 + AluYa5 SINE Alu 1 299 -12 199 236 135 67 chr2 9836272 9836317 -243420266 - MIR3 SINE MIR -144 64 9 473 228 0 78 chr2 9837602 9837782 -243418801 - L1MC3 LINE L1 -72 7713 7548 1689 242 82 50 chr2 9838306 9838942 -243417641 - L1MC4 LINE L1 -162 7880 7225 1736 149 4 4 chr2 9839299 9839574 -243417009 - AluJo SINE Alu -37 275 1 207 250 175 25 chr2 9840068 9840148 -243416435 + MIR3 SINE MIR 76 167 -41 315 345 61 20 chr2 9840270 9840418 -243416165 + MIR SINE MIR 12 165 -97 * 1457 224 49 75 chr2 9840413 9841001 -243415582 + L2 LINE L2 2726 3313 0 242 198 229 62 chr2 9841005 9841101 -243415482 + MIR SINE MIR 151 262 0 1940 120 24 0 chr2 9841147 9841439 -243415144 + AluSx SINE Alu 3 301 -11 2329 68 3 3 chr2 9841579 9841875 -243414708 + AluSp SINE Alu 1 296 -17 35 24 0 0 chr2 9843277 9843319 -243413264 + AT_rich Low_complexity Low_complexity 1 42 0 2268 72 7 0 chr2 9843342 9843634 -243412949 + AluY SINE Alu 1 294 -17 302 207 207 12 chr2 9843636 9843718 -243412865 - MIR SINE MIR -100 162 65 204 191 0 32 chr2 9843719 9843782 -243412801 + T-rich Low_complexity Low_complexity 1 61 0 635 303 61 39 chr2 9844185 9844597 -243411986 + L1MEc LINE L1 778 1198 -5940 917 207 66 4 chr2 9844753 9844976 -243411607 - L1ME1 LINE L1 0 6178 5948 520 286 46 14 chr2 9845000 9845261 -243411322 + L1MEc LINE L1 1331 1467 -5392 2085 113 0 0 chr2 9845261 9845553 -243411030 + AluSx SINE Alu 1 292 -20 520 286 46 14 chr2 9845553 9845580 -243411003 + L1MEc LINE L1 1467 1492 -5367 2082 118 7 0 chr2 9845941 9846228 -243410355 - AluSx SINE Alu -23 289 1 715 295 106 12 chr2 9846403 9846725 -243409858 - L1ME1 LINE L1 -234 5887 5536 201 279 0 40 chr2 9847570 9847873 -243408710 + (CGGG)n Simple_repeat Simple_repeat 1 290 0 426 317 0 28 chr2 9848031 9848211 -243408372 + (CGGG)n Simple_repeat Simple_repeat 4 178 0 360 344 0 32 chr2 9848226 9848412 -243408171 + (CGGG)n Simple_repeat Simple_repeat 1 180 0 289 333 0 32 chr2 9848487 9848673 -243407910 + (CGGG)n Simple_repeat Simple_repeat 1 180 0 440 324 0 27 chr2 9848876 9849061 -243407522 + (CGGG)n Simple_repeat Simple_repeat 1 180 0 279 359 0 28 chr2 9849161 9849342 -243407241 + (CGGG)n Simple_repeat Simple_repeat 1 176 0 383 352 0 29 chr2 9849666 9850132 -243406451 + (CGGG)n Simple_repeat Simple_repeat 1 452 0 439 323 0 28 chr2 9850161 9850532 -243406051 + (CGGG)n Simple_repeat Simple_repeat 1 360 0 308 344 0 27 chr2 9850555 9850738 -243405845 + (TGGG)n Simple_repeat Simple_repeat 1 178 0 240 356 0 28 chr2 9850707 9850887 -243405696 + (CGGG)n Simple_repeat Simple_repeat 2 176 0 * 2167 104 0 13 chr2 9851245 9851544 -243405039 - AluSq SINE Alu -17 296 2 462 341 75 6 chr2 9852347 9852520 -243404063 + MIR SINE MIR 21 205 -57 231 367 37 18 chr2 9852587 9852696 -243403887 - L2 LINE L2 -21 3251 3141 325 236 176 23 chr2 9852736 9852907 -243403676 - MIR SINE MIR -31 231 34 188 270 167 16 chr2 9853444 9853570 -243403013 - L2 LINE L2 -173 3099 2955 346 301 0 0 chr2 9853616 9853699 -243402884 - MIR SINE MIR -95 113 31 638 273 94 88 chr2 9853885 9854126 -243402457 + L1MC4a LINE L1 5374 5612 -2196 2035 122 0 0 chr2 9854126 9854422 -243402161 + AluSq SINE Alu 9 304 -9 638 273 94 88 chr2 9854422 9854851 -243401732 + L1MC4a LINE L1 5612 6048 -1760 2147 103 7 0 chr2 9854929 9855229 -243401354 - AluSx SINE Alu -9 303 2 1660 159 37 10 chr2 9855312 9855437 -243401146 + AluJb SINE Alu 1 121 -191 192 77 0 0 chr2 9855437 9855463 -243401120 + (CA)n Simple_repeat Simple_repeat 2 27 0 1660 159 37 10 chr2 9855463 9855633 -243400950 + AluJb SINE Alu 121 304 -8 459 293 110 62 chr2 9855971 9856261 -243400322 - L2 LINE L2 -3 3269 2966 280 244 56 0 chr2 9856454 9856544 -243400039 + MER113 DNA MER1_type? 7 101 -420 2243 106 0 0 chr2 9856572 9856883 -243399700 + AluSx SINE Alu 1 311 -1 1881 245 179 15 chr2 9857100 9857901 -243398682 + L2 LINE L2 2002 2933 -381 225 308 133 8 chr2 9857982 9858102 -243398481 + L2 LINE L2 3136 3270 -43 25 0 0 0 chr2 9858207 9858232 -243398351 + GC_rich Low_complexity Low_complexity 1 25 0 230 274 16 65 chr2 9858509 9858695 -243397888 + G-rich Low_complexity Low_complexity 4 180 0 24 0 0 0 chr2 9859198 9859222 -243397361 + GC_rich Low_complexity Low_complexity 1 24 0 24 32 0 0 chr2 9859267 9859298 -243397285 + GC_rich Low_complexity Low_complexity 1 31 0 306 220 114 53 chr2 9859921 9860053 -243396530 + L1MD3 LINE L1 7856 7995 0 303 271 19 0 chr2 9863447 9863554 -243393029 - L1MC4 LINE L1 0 8042 7934 1068 148 13 91 chr2 9863636 9863866 -243392717 + AluJb SINE Alu 83 294 -18 1532 188 40 13 chr2 9864316 9864619 -243391964 - AluJo SINE Alu -1 311 1 2239 78 0 7 chr2 9864742 9865037 -243391546 - AluSc SINE Alu -16 293 1 1675 146 7 29 chr2 9865491 9865799 -243390784 - AluJb SINE Alu -1 311 11 226 252 81 27 chr2 9866961 9867072 -243389511 - L1MC5 LINE L1 -54 7907 7791 2289 96 0 0 chr2 9867485 9867797 -243388786 + AluSq SINE Alu 1 312 -1 675 255 192 5 chr2 9867843 9868051 -243388532 - MIR SINE MIR 0 262 16 185 216 81 0 chr2 9870134 9870171 -243386412 + MIR3 SINE MIR 139 178 -30 995 169 22 38 chr2 9870511 9870694 -243385889 - MER58A DNA MER1_type -1 223 44 395 340 33 0 chr2 9872302 9872455 -243384128 + MIR3 SINE MIR 44 201 -7 274 304 81 31 chr2 9872914 9873124 -243383459 + MIR SINE MIR 44 262 0 2125 112 0 13 chr2 9873444 9873749 -243382834 + AluSx SINE Alu 1 301 -11 260 95 0 0 chr2 9875221 9875263 -243381320 - L1MA6 LINE L1 -4 6296 6255 194 211 0 26 chr2 9876579 9876617 -243379966 - L2 LINE L2 -25 3247 3211 2433 53 0 3 chr2 9877171 9877471 -243379112 - AluY SINE Alu -12 299 1 268 293 10 30 chr2 9881428 9881527 -243375056 + MIR3 SINE MIR 2 98 -110 211 267 152 19 chr2 9882104 9882209 -243374374 - L2 LINE L2 0 3313 3195 1966 128 0 28 chr2 9882923 9883243 -243373340 + AluSq SINE Alu 1 311 -2 473 189 57 9 chr2 9883249 9883355 -243373228 + MIR SINE MIR 78 188 -74 2036 112 0 7 chr2 9884654 9884948 -243371635 - AluSx SINE Alu -20 292 1 2358 100 39 30 chr2 9885156 9885517 -243371066 - THE1B LTR MaLR 0 364 1 2207 92 0 0 chr2 9886033 9886327 -243370256 + AluSq SINE Alu 1 294 -19 1217 89 48 0 chr2 9886329 9886497 -243370086 + AluSg/x SINE Alu 126 301 -9 1587 126 4 16 chr2 9886558 9886812 -243369771 - AluJo SINE Alu -10 302 52 566 236 185 34 chr2 9888799 9888977 -243367606 + MER58A DNA MER1_type 5 209 -15 185 314 229 0 chr2 9889082 9889187 -243367396 - L2 LINE L2 -5 3267 3139 395 204 31 122 chr2 9889668 9889864 -243366719 + MER5B DNA MER1_type 1 178 0 669 191 107 6 chr2 9889876 9890044 -243366539 - MER5A DNA MER1_type -4 185 1 2084 87 10 27 chr2 9891199 9891498 -243365085 + AluSq SINE Alu 1 294 -19 1747 158 7 20 chr2 9892104 9892407 -243364176 + AluJb SINE Alu 1 299 -13 1865 123 3 3 chr2 9893735 9894042 -243362541 - AluSx SINE Alu 0 307 1 1331 197 0 4 chr2 9894049 9894298 -243362285 - AluJb SINE Alu -30 282 35 1858 134 24 3 chr2 9894307 9894597 -243361986 - AluSx SINE Alu -16 296 1 1586 260 65 88 chr2 9895426 9896199 -243360384 - L1MEc LINE L1 -5605 791 37 2044 114 10 7 chr2 9896875 9897174 -243359409 - AluSx SINE Alu -12 300 1 2232 90 3 7 chr2 9897474 9897775 -243358808 - AluSq SINE Alu -13 300 1 21 0 0 0 chr2 9899307 9899328 -243357255 + AT_rich Low_complexity Low_complexity 1 21 0 690 306 5 5 chr2 9900155 9900354 -243356229 - MER58A DNA MER1_type 0 224 26 189 0 0 0 chr2 9900579 9900600 -243355983 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 280 180 0 0 chr2 9900607 9900657 -243355926 - L1MC4 LINE L1 -10 8032 7983 1765 234 158 1 chr2 9900658 9901331 -243355252 - L1MC4 LINE L1 -142 7900 6974 963 182 0 0 chr2 9901459 9901635 -243354948 - FRAM SINE Alu -2 174 1 378 0 0 0 chr2 9901635 9901677 -243354906 + (TTA)n Simple_repeat Simple_repeat 2 43 0 239 146 0 0 chr2 9901679 9901720 -243354863 - Alu SINE Alu -240 80 40 1691 140 48 24 chr2 9902634 9902926 -243353657 + AluJb SINE Alu 1 299 -13 262 300 108 23 chr2 9902965 9903095 -243353488 + MIR3 SINE MIR 22 162 -46 495 281 79 35 chr2 9904462 9904690 -243351893 - L2 LINE L2 -4 3309 3072 2233 81 13 3 chr2 9904864 9905173 -243351410 + AluSx SINE Alu 1 312 0 225 0 0 0 chr2 9905749 9905774 -243350809 + (TG)n Simple_repeat Simple_repeat 2 26 0 * 1011 161 0 0 chr2 9905773 9905953 -243350630 + (TA)n Simple_repeat Simple_repeat 1 180 0 239 172 62 0 chr2 9905958 9906022 -243350561 - L1MC4 LINE L1 -1339 6703 6636 207 170 43 0 chr2 9906953 9907000 -243349583 + T-rich Low_complexity Low_complexity 4 52 0 1616 188 0 7 chr2 9907102 9907390 -243349193 - AluJo SINE Alu -14 298 13 703 276 35 43 chr2 9907431 9907663 -243348920 - MIR SINE MIR 0 262 33 27 0 0 0 chr2 9908526 9908553 -243348030 + AT_rich Low_complexity Low_complexity 1 27 0 240 320 72 0 chr2 9910179 9910276 -243346307 + L2 LINE L2 3163 3266 -6 581 288 81 0 chr2 9910462 9910622 -243345961 + L2 LINE L2 2598 2770 -544 905 289 48 38 chr2 9910906 9911300 -243345283 + ERVL LTR ERVL 2572 2969 -2795 470 305 5 63 chr2 9911303 9911526 -243345057 + L2 LINE L2 3077 3286 -27 375 274 41 20 chr2 9911769 9911915 -243344668 + LTR33 LTR ERVL 373 521 0 366 193 181 0 chr2 9911986 9912069 -243344514 + LTR33 LTR ERVL 2 99 -422 741 140 171 49 chr2 9912103 9912267 -243344316 + MLT2B2 LTR ERVL 320 503 -12 1188 223 34 10 chr2 9912278 9912634 -243343949 + ERVL LTR ERVL 6 394 -5288 4630 104 20 40 chr2 9912681 9913383 -243343200 - LTR12 LTR ERV1 0 688 1 708 219 45 52 chr2 9913566 9913854 -243342729 - pTR5 LTR ERV1 -1410 1028 743 1289 161 135 15 chr2 9914325 9914464 -243342119 - AluJo SINE Alu -10 292 171 321 26 0 0 chr2 9914464 9914502 -243342081 + (TTA)n Simple_repeat Simple_repeat 2 39 0 1289 161 135 15 chr2 9914502 9914622 -243341961 - AluJo SINE Alu -131 171 2 3351 242 53 41 chr2 9914871 9915900 -243340683 - L1M4 LINE L1 -5274 1268 227 826 239 78 58 chr2 9915900 9916260 -243340323 + L1ME2 LINE L1 5789 6155 -9 477 297 0 32 chr2 9917671 9917856 -243338727 + (CGGG)n Simple_repeat Simple_repeat 2 180 0 394 341 0 30 chr2 9917874 9918684 -243337899 + (CGGG)n Simple_repeat Simple_repeat 1 785 0 390 306 0 38 chr2 9918739 9918922 -243337661 + (CGGG)n Simple_repeat Simple_repeat 1 176 0 484 280 0 33 chr2 9919034 9919216 -243337367 + (CGGG)n Simple_repeat Simple_repeat 1 176 0 440 340 0 27 chr2 9919246 9919656 -243336927 + (CGGG)n Simple_repeat Simple_repeat 1 398 0 383 333 0 27 chr2 9919632 9919815 -243336768 + (TGGG)n Simple_repeat Simple_repeat 1 178 0 * 250 374 0 25 chr2 9919849 9920012 -243336571 + (CGGG)n Simple_repeat Simple_repeat 2 160 0 225 0 0 0 chr2 9920667 9920692 -243335891 + (TG)n Simple_repeat Simple_repeat 2 26 0 * 1011 161 0 0 chr2 9920691 9920871 -243335712 + (TA)n Simple_repeat Simple_repeat 1 180 0 226 133 0 0 chr2 9920896 9920941 -243335642 - LTR66 LTR ERVL -171 439 395 345 304 0 22 chr2 9920942 9921034 -243335549 + L1MC4 LINE L1 6614 6703 -1339 412 188 1 79 chr2 9921042 9921152 -243335431 - L1MC4 LINE L1 -1339 6983 1988 1990 125 17 0 chr2 9921656 9921945 -243334638 - AluSg SINE Alu -16 294 1 765 233 43 70 chr2 9922049 9922616 -243333967 - L1MC5 LINE L1 -30 7931 7331 1848 87 128 0 chr2 9922627 9922893 -243333690 + AluSx SINE Alu 1 300 -12 255 158 0 70 chr2 9922896 9922953 -243333630 - L1MC5 LINE L1 -610 7351 7299 * 23726 70 16 9 chr2 9922945 9925214 -243331369 - L1PA6 LINE L1 -2 6152 3901 288 0 0 0 chr2 9925214 9925246 -243331337 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2143 82 0 0 chr2 9925248 9925529 -243331054 - AluY SINE Alu -30 281 1 23726 70 16 9 chr2 9925529 9929356 -243327227 - L1PA6 LINE L1 -2253 3901 12 255 250 0 83 chr2 9930351 9930459 -243326124 + L1P LINE L1 4951 5049 -1097 296 291 112 24 chr2 9930527 9930612 -243325971 + L1ME1 LINE L1 5255 5331 -2477 2646 56 0 0 chr2 9930612 9930918 -243325665 + AluY SINE Alu 1 306 -5 296 291 112 24 chr2 9930918 9931038 -243325545 + L1ME1 LINE L1 5331 5478 -2330 803 287 95 31 chr2 9931092 9931704 -243324879 - L2 LINE L2 0 3313 2656 1894 151 26 3 chr2 9931798 9932102 -243324481 - AluJb SINE Alu -1 311 1 21 0 0 0 chr2 9932111 9932132 -243324451 + AT_rich Low_complexity Low_complexity 1 21 0 2429 55 17 0 chr2 9932137 9932428 -243324155 - AluY SINE Alu -15 296 1 791 164 0 22 chr2 9932673 9932807 -243323776 - FLAM_C SINE Alu -2 131 1 1399 181 8 17 chr2 9932807 9933099 -243323484 + L1ME1 LINE L1 5575 5856 -312 690 178 55 7 chr2 9933864 9934010 -243322573 + MER5A DNA MER1_type 1 153 -36 2072 126 0 10 chr2 9934629 9934923 -243321660 + AluSx SINE Alu 5 295 -17 186 71 0 0 chr2 9936873 9936901 -243319682 + (TTTTG)n Simple_repeat Simple_repeat 4 31 0 362 293 149 14 chr2 9937495 9937710 -243318873 - MIR SINE MIR -4 258 15 205 356 30 10 chr2 9938274 9938375 -243318208 + L2 LINE L2 2900 3002 -270 2298 81 0 33 chr2 9939187 9939494 -243317089 + AluSx SINE Alu 1 297 -15 203 358 46 18 chr2 9990385 9990494 -243266089 - MER5A DNA MER1_type -30 159 48 298 297 0 0 chr2 9990539 9990613 -243265970 - MER5B DNA MER1_type 0 178 105 180 0 0 0 chr2 9991129 9991149 -243265434 + (T)n Simple_repeat Simple_repeat 1 20 0 2222 84 30 0 chr2 9991322 9991618 -243264965 + AluSq SINE Alu 1 305 -8 355 280 37 112 chr2 9992053 9992267 -243264316 + L1MEd LINE L1 867 1064 -5055 487 195 46 0 chr2 9992647 9992734 -243263849 + 7SLRNA srpRNA srpRNA 1 91 -229 1488 173 14 25 chr2 9993923 9994207 -243262376 + AluJo SINE Alu 11 291 -21 309 316 65 7 chr2 9994334 9994489 -243262094 + MLT1K LTR MaLR 357 520 -68 241 319 64 0 chr2 9994542 9994636 -243261947 - MIR SINE MIR -68 194 95 1904 131 7 13 chr2 9995423 9995593 -243260990 - AluSx SINE Alu -9 303 134 2222 97 3 0 chr2 9995593 9995892 -243260691 - AluSp SINE Alu -13 300 1 1904 131 7 13 chr2 9995892 9996026 -243260557 - AluSx SINE Alu -178 134 1 242 311 59 17 chr2 9996069 9996188 -243260395 + MIR SINE MIR 73 196 -66 549 241 45 75 chr2 9996208 9996251 -243260332 - L1MB8 LINE L1 -27 6151 6108 2136 106 7 0 chr2 9996251 9996543 -243260040 + AluSx SINE Alu 1 294 -18 549 241 45 75 chr2 9996543 9996698 -243259885 - L1MB8 LINE L1 -70 6108 5959 814 216 154 10 chr2 9997297 9997392 -243259191 + MER58 DNA MER1_type 1 81 -260 2268 87 3 6 chr2 9997392 9997703 -243258880 + AluY SINE Alu 1 310 -1 814 216 154 10 chr2 9997703 9997815 -243258768 + MER58 DNA MER1_type 81 238 -103 199 346 59 10 chr2 9998614 9998715 -243257868 + MIR3 SINE MIR 13 118 -90 207 0 0 0 chr2 9999203 9999226 -243257357 + (CTGGGG)n Simple_repeat Simple_repeat 2 24 0 374 289 209 13 chr2 9999236 9999841 -243256742 - L2 LINE L2 -9 3304 2564 2119 98 0 0 chr2 10000288 10000598 -243255985 - AluY SINE Alu 0 311 1 493 291 126 54 chr2 10000607 10000957 -243255626 + L2 LINE L2 2896 3270 -2 2247 79 10 0 chr2 10001100 10001391 -243255192 - AluSc SINE Alu -15 294 1 224 175 16 32 chr2 10002479 10002542 -243254041 + GA-rich Low_complexity Low_complexity 1 62 0 260 313 0 49 chr2 10002823 10002967 -243253616 + MER112 DNA MER1_type 118 254 -6 440 286 16 8 chr2 10003570 10003696 -243252887 - MIR SINE MIR -121 141 15 349 274 20 20 chr2 10003764 10003866 -243252717 + MER5B DNA MER1_type 77 178 0 2134 105 13 0 chr2 10004372 10004676 -243251907 - AluSc SINE Alu -1 308 1 1495 144 83 11 chr2 10004700 10004989 -243251594 - AluJo SINE Alu 0 308 1 474 222 0 0 chr2 10005000 10005081 -243251502 - AluJ/FLAM SINE Alu -228 84 4 903 281 106 59 chr2 10005252 10005288 -243251295 - HAL1b LINE L1 -461 887 854 2236 113 3 0 chr2 10005288 10005599 -243250984 + AluSx SINE Alu 1 312 0 903 281 106 59 chr2 10005599 10006346 -243250237 - HAL1b LINE L1 -494 854 67 2132 117 0 0 chr2 10006555 10006854 -243249729 - AluSx SINE Alu -13 299 1 888 129 0 0 chr2 10007457 10007589 -243248994 + AluSq/x SINE Alu 1 132 -181 2206 97 3 0 chr2 10007591 10007890 -243248693 + AluY SINE Alu 1 300 -11 2453 232 68 55 chr2 10007951 10008242 -243248341 - L1ME1 LINE L1 -5 6161 5875 2222 88 7 3 chr2 10008242 10008538 -243248045 - AluSq SINE Alu -16 297 1 2453 232 68 55 chr2 10008538 10008721 -243247862 - L1ME1 LINE L1 -291 5875 5696 2091 106 3 13 chr2 10008721 10009023 -243247560 - AluSg SINE Alu -11 299 1 2453 232 68 55 chr2 10009023 10009363 -243247220 - L1ME1 LINE L1 -470 5696 5322 2322 90 0 0 chr2 10009363 10009673 -243246910 - AluY SINE Alu -1 310 1 2453 232 68 55 chr2 10009673 10009898 -243246685 - L1ME1 LINE L1 -844 5322 5101 1889 154 20 0 chr2 10009902 10010208 -243246375 - AluSx SINE Alu 0 312 1 1182 148 118 4 chr2 10010238 10010475 -243246108 + L1M2 LINE L1 5509 5772 -540 2044 129 0 7 chr2 10010475 10010769 -243245814 + AluSx SINE Alu 1 292 -20 323 208 57 9 chr2 10010794 10010900 -243245683 - L1ME1 LINE L1 -1095 5051 4941 1045 196 30 4 chr2 10011256 10011491 -243245092 + L1MB4 LINE L1 5940 6180 0 2014 101 0 80 chr2 10011617 10011943 -243244640 + AluSx SINE Alu 1 300 -12 2373 66 3 3 chr2 10012114 10012419 -243244164 - AluSp SINE Alu -6 307 3 1396 74 133 0 chr2 10013562 10013765 -243242818 + MER30 DNA MER1_type 1 230 0 186 43 0 0 chr2 10014064 10014087 -243242496 + (ATTG)n Simple_repeat Simple_repeat 1 23 0 1566 149 18 21 chr2 10014088 10014369 -243242214 - AluJb SINE Alu -32 280 1 2410 73 0 6 chr2 10014438 10014755 -243241828 - AluYb8 SINE Alu -3 315 1 1113 263 77 27 chr2 10014762 10015203 -243241380 - L1ME3A LINE L1 -6 6164 5702 189 178 0 0 chr2 10015374 10015419 -243241164 + (TGAA)n Simple_repeat Simple_repeat 3 47 0 341 338 47 27 chr2 10015463 10015611 -243240972 - MIR SINE MIR -15 247 97 262 267 130 8 chr2 10015601 10015732 -243240851 + MIR SINE MIR 96 242 -20 * 190 261 43 0 chr2 10015767 10015813 -243240770 - MIR SINE MIR -174 88 41 306 232 14 0 chr2 10017047 10017116 -243239467 + MER103 DNA DNA 17 86 -80 1811 146 34 3 chr2 10018488 10018783 -243237800 - AluJb SINE Alu -8 304 1 381 206 0 0 chr2 10019021 10019123 -243237460 + (CA)n Simple_repeat Simple_repeat 1 102 0 253 311 61 2 chr2 10019200 10019319 -243237264 - MIR SINE MIR -56 152 28 274 276 92 10 chr2 10019793 10019891 -243236692 + MIR SINE MIR 11 116 -146 346 266 37 0 chr2 10020125 10020234 -243236349 + MIR3 SINE MIR 44 156 -52 338 136 15 30 chr2 10020919 10020985 -243235598 + MIR SINE MIR 81 145 -63 257 314 99 8 chr2 10021231 10021352 -243235231 + MIR SINE MIR 28 159 -103 417 190 0 0 chr2 10021427 10021527 -243235056 + (TG)n Simple_repeat Simple_repeat 1 100 0 418 262 160 27 chr2 10021637 10021862 -243234721 + MIR SINE MIR 8 262 0 1506 154 4 0 chr2 10022435 10022675 -243233908 - AluJb SINE Alu -71 241 1 191 329 150 7 chr2 10023092 10023232 -243233351 + L3 LINE CR1 1138 1297 -280 259 289 168 13 chr2 10023974 10024123 -243232460 - MIR SINE MIR -70 192 21 257 333 23 0 chr2 10024589 10024676 -243231907 + L2 LINE L2 3182 3270 -2 1185 160 14 89 chr2 10025476 10025757 -243230826 + MER31A LTR ERV1 216 475 -10 1830 139 13 30 chr2 10026399 10026702 -243229881 - AluJb SINE Alu -14 298 1 333 342 9 0 chr2 10029230 10029341 -243227242 - L2 LINE L2 -22 3291 3180 206 208 43 86 chr2 10029529 10029643 -243226940 + MIR SINE MIR 14 120 -88 693 217 14 0 chr2 10030177 10030320 -243226263 - MER45A DNA AcHobo -31 147 3 621 228 70 6 chr2 10030462 10030620 -243225963 + MIR SINE MIR 23 190 -72 1028 240 89 12 chr2 10031390 10031719 -243224864 + MLT1A2 LTR MaLR 3 450 -17 1746 147 40 17 chr2 10032015 10032315 -243224268 + AluJo SINE Alu 1 307 -5 277 239 11 11 chr2 10032489 10032502 -243224081 - L1MA10 LINE L1 -1 6333 6321 1744 227 37 64 chr2 10032502 10032789 -243223794 - L1ME3 LINE L1 -4 6158 5865 3214 147 18 72 chr2 10032789 10033024 -243223559 - L1MB3 LINE L1 -7 6176 5930 1921 124 3 29 chr2 10033024 10033330 -243223253 - AluSx SINE Alu -14 298 1 3214 147 18 72 chr2 10033330 10033695 -243222888 - L1MB3 LINE L1 -253 5930 5613 2326 66 3 0 chr2 10033695 10033983 -243222600 - AluSp SINE Alu -15 298 10 3214 147 18 72 chr2 10033983 10034048 -243222535 - L1MB3 LINE L1 -570 5613 5546 1744 227 37 64 chr2 10034048 10034350 -243222233 - L1ME3 LINE L1 -297 5865 5585 2056 121 0 0 chr2 10034388 10034717 -243221866 + AluSx SINE Alu 1 329 0 229 197 66 0 chr2 10034724 10034785 -243221798 - L1ME LINE L1 -205 5916 5852 * 991 266 80 17 chr2 10034781 10035130 -243221453 - L1MD2 LINE L1 -2 6357 5987 240 163 0 0 chr2 10035131 10035174 -243221409 + CT-rich Low_complexity Low_complexity 1 43 0 1159 143 0 0 chr2 10035174 10035342 -243221241 - AluSx SINE Alu -140 172 5 2346 54 0 17 chr2 10035346 10035644 -243220939 - AluY SINE Alu -12 299 7 2148 127 0 0 chr2 10035648 10035947 -243220636 - AluSx SINE Alu -13 299 1 1368 236 58 42 chr2 10035977 10036134 -243220449 - L1MD2 LINE L1 -365 5994 5841 2125 184 17 0 chr2 10036134 10036493 -243220090 + MLT1A1 LTR MaLR 1 365 0 1368 236 58 42 chr2 10036493 10036575 -243220008 - L1MD2 LINE L1 -518 5841 5762 2120 107 7 0 chr2 10036575 10036875 -243219708 - AluSx SINE Alu -10 302 1 1368 236 58 42 chr2 10036875 10037016 -243219567 - L1MD2 LINE L1 -597 5762 5607 319 289 0 12 chr2 10037026 10037109 -243219474 - Tigger5 DNA MER2_type 0 2323 2242 * 580 176 0 4 chr2 10037085 10037225 -243219358 - Tigger5 DNA MER2_type -2129 194 3 210 37 0 0 chr2 10038178 10038205 -243218378 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2006 121 3 0 chr2 10038209 10038491 -243218092 - AluSx SINE Alu -29 283 1 555 245 41 0 chr2 10038565 10038712 -243217871 - MIR SINE MIR -43 219 67 527 202 110 140 chr2 10038754 10038962 -243217621 - L1M4 LINE L1 -2884 3262 3049 226 125 100 0 chr2 10038962 10039002 -243217581 - Alu SINE Alu -195 107 64 * 259 114 0 0 chr2 10038970 10039005 -243217578 - AluJ/FLAM SINE Alu -207 95 61 * 527 202 110 140 chr2 10039002 10039126 -243217457 - L1M4 LINE L1 -3097 3049 2902 1896 153 0 6 chr2 10039177 10039490 -243217093 - AluJo SINE Alu -1 311 1 1434 117 0 61 chr2 10039555 10039828 -243216755 + AluSg/x SINE Alu 76 312 0 355 163 12 75 chr2 10039847 10039927 -243216656 + MLT1E2 LTR MaLR 393 626 0 694 161 0 9 chr2 10039965 10040077 -243216506 + FLAM_A SINE Alu 25 135 -7 1793 151 27 3 chr2 10040320 10040619 -243215964 + AluJo SINE Alu 1 306 -6 614 133 0 14 chr2 10040992 10041232 -243215351 + AluSx SINE Alu 1 294 -18 2381 70 0 13 chr2 10041232 10041545 -243215038 + AluY SINE Alu 1 309 -2 343 200 8 144 chr2 10041818 10041943 -243214640 - MER81 DNA DNA 0 114 7 226 291 58 0 chr2 10042198 10042284 -243214299 - MIR3 SINE MIR -27 181 91 193 292 14 56 chr2 10042313 10042385 -243214198 + MIR3 SINE MIR 4 72 -136 255 150 0 0 chr2 10042660 10042720 -243213863 + (GA)n Simple_repeat Simple_repeat 2 61 0 205 262 12 48 chr2 10043127 10043211 -243213372 + C-rich Low_complexity Low_complexity 1 81 0 328 282 0 13 chr2 10043570 10043648 -243212935 + MIR3 SINE MIR 81 157 -51 1513 72 0 43 chr2 10043671 10043879 -243212704 - AluSc SINE Alu -110 199 1 298 313 87 33 chr2 10044030 10044180 -243212403 + MIR SINE MIR 105 262 0 196 268 56 14 chr2 10045068 10045139 -243211444 + MIR SINE MIR 111 184 -78 868 196 16 37 chr2 10045305 10045494 -243211089 + MER5A DNA MER1_type 5 189 0 1364 226 36 33 chr2 10045669 10046031 -243210552 - MLT1B LTR MaLR -11 379 17 181 290 224 28 chr2 10046484 10046591 -243209992 - MIR SINE MIR -115 147 20 268 336 80 0 chr2 10047066 10047191 -243209392 + MIR SINE MIR 79 213 -49 310 330 52 0 chr2 10047220 10047317 -243209266 + L2 LINE L2 3159 3260 -12 844 142 17 17 chr2 10047355 10047531 -243209052 + (ATGGTG)n Simple_repeat Simple_repeat 1 176 0 954 157 0 0 chr2 10047540 10047718 -243208865 + (TGG)n Simple_repeat Simple_repeat 3 180 0 704 148 11 28 chr2 10047736 10047912 -243208671 + (ATGGTG)n Simple_repeat Simple_repeat 1 173 0 725 184 0 17 chr2 10047946 10048120 -243208463 + (ATGGTG)n Simple_repeat Simple_repeat 3 173 0 487 209 0 37 chr2 10048157 10048320 -243208263 + (ATGGTG)n Simple_repeat Simple_repeat 4 160 0 244 246 15 15 chr2 10048703 10048768 -243207815 + MIR SINE MIR 56 120 -142 308 314 81 0 chr2 10050583 10050707 -243205876 + LTR33 LTR ERVL 45 178 -343 311 348 35 0 chr2 10050823 10050964 -243205619 + LTR33 LTR ERVL 344 489 -32 1297 165 4 17 chr2 10055830 10056067 -243200516 - AluJb SINE Alu -15 297 64 1508 168 10 1 chr2 10056067 10056465 -243200118 - LTR19A LTR ERV1 -6 480 1 917 134 6 0 chr2 10056465 10056641 -243199942 - HERVFH19I LTR ERV1 0 7719 4796 * 8347 178 50 42 chr2 10056640 10056924 -243199659 - HERVFH19I LTR ERV1 -283 5417 5137 2458 71 3 0 chr2 10056924 10057234 -243199349 + AluY SINE Alu 1 311 0 8347 178 50 42 chr2 10057234 10057267 -243199316 - HERVFH19I LTR ERV1 -563 5137 5106 2015 131 3 0 chr2 10057267 10057557 -243199026 - AluSq SINE Alu -22 291 1 8347 178 50 42 chr2 10057557 10058289 -243198294 - HERVFH19I LTR ERV1 -594 5106 4382 2171 118 0 6 chr2 10058289 10058603 -243197980 + AluSx SINE Alu 1 312 0 8347 178 50 42 chr2 10058603 10059746 -243196837 - HERVFH19I LTR ERV1 -1318 4382 2865 2749 118 98 0 chr2 10059805 10060246 -243196337 - LTR19A LTR ERV1 0 486 3 480 151 0 0 chr2 10060248 10060321 -243196262 - AluJ/FLAM SINE Alu -238 74 2 645 229 42 31 chr2 10060698 10060890 -243195693 + MIR SINE MIR 14 207 -55 2049 108 0 7 chr2 10060893 10061181 -243195402 + AluSg SINE Alu 1 286 -24 237 33 0 0 chr2 10061181 10061211 -243195372 + (CATA)n Simple_repeat Simple_repeat 2 31 0 259 216 21 52 chr2 10061449 10061546 -243195037 + LTR67 LTR ERVL 442 535 -22 393 288 36 7 chr2 10061677 10061816 -243194767 - L2 LINE L2 -181 3091 2949 2082 125 0 3 chr2 10063104 10063417 -243193166 - AluSx SINE Alu 0 312 1 2077 77 0 0 chr2 10063426 10063687 -243192896 + AluY SINE Alu 38 298 -13 554 256 54 22 chr2 10063687 10063910 -243192673 + L1ME2 LINE L1 5598 5827 -337 362 310 152 17 chr2 10063917 10064399 -243192184 + L1MEc LINE L1 1150 1664 -4551 573 330 86 23 chr2 10064468 10065167 -243191416 + L2 LINE L2 2313 3080 -192 1993 156 0 6 chr2 10066468 10066782 -243189801 - AluSx SINE Alu 0 312 1 399 127 0 0 chr2 10067000 10067063 -243189520 + (TG)n Simple_repeat Simple_repeat 2 64 0 1515 180 171 3 chr2 10068150 10068466 -243188117 + MLT1A2 LTR MaLR 3 371 -3 1568 261 105 10 chr2 10068468 10068873 -243187710 + L1ME3A LINE L1 4929 5294 -868 1960 147 0 0 chr2 10068873 10069172 -243187411 + AluSx SINE Alu 1 299 -13 1568 261 105 10 chr2 10069172 10069339 -243187244 + L1ME3A LINE L1 5294 5444 -718 2865 147 20 29 chr2 10069339 10069828 -243186755 + MER66B LTR ERV1 2 486 0 1568 261 105 10 chr2 10069828 10070099 -243186484 + L1ME3A LINE L1 5444 5853 -309 1795 166 13 0 chr2 10070158 10070466 -243186117 + AluJb SINE Alu 1 312 0 515 182 42 7 chr2 10070468 10070611 -243185972 + GA-rich Low_complexity Low_complexity 3 150 0 202 74 0 0 chr2 10070621 10070648 -243185935 + (GAAAA)n Simple_repeat Simple_repeat 1 27 0 2085 128 0 3 chr2 10070662 10070968 -243185615 + AluJb SINE Alu 1 305 -7 375 241 147 9 chr2 10070972 10071088 -243185495 + L1ME3A LINE L1 5976 6107 -63 502 83 48 36 chr2 10071094 10071163 -243185420 + LTR5 LTR ERVK 1 73 -896 2096 77 4 4 chr2 10071163 10071437 -243185146 - AluSp SINE Alu -39 274 1 502 83 48 36 chr2 10071437 10071451 -243185132 + LTR5 LTR ERVK 73 85 -884 409 21 0 0 chr2 10071451 10071499 -243185084 + AluSp/q SINE Alu 218 265 -38 600 88 0 0 chr2 10071499 10071579 -243185004 - LTR5 LTR ERVK -889 80 1 561 215 67 0 chr2 10071581 10071730 -243184853 - MER97b DNA MER1_type? -380 673 515 292 268 0 24 chr2 10071896 10071978 -243184605 - MER115 DNA AcHobo -613 80 1 1649 142 49 17 chr2 10072319 10072607 -243183976 - AluJo SINE Alu -9 303 7 193 324 59 0 chr2 10073028 10073096 -243183487 + MIR SINE MIR 81 152 -110 702 248 12 6 chr2 10073259 10073420 -243183163 + MER103 DNA DNA 3 164 -2 224 59 29 0 chr2 10073424 10073458 -243183125 + (TG)n Simple_repeat Simple_repeat 1 35 0 742 74 44 15 chr2 10073475 10073610 -243182973 + GA-rich Low_complexity Low_complexity 2 140 0 473 321 77 6 chr2 10076050 10076218 -243180365 - MIR SINE MIR -48 214 35 925 243 74 42 chr2 10076309 10076646 -243179937 + MLT1A1 LTR MaLR 1 348 -17 427 258 121 0 chr2 10076671 10076795 -243179788 - MIR SINE MIR -102 160 22 2484 51 0 13 chr2 10076964 10077276 -243179307 - AluY SINE Alu -3 308 1 3474 178 22 46 chr2 10077770 10078527 -243178056 + L1MB3 LINE L1 5417 6155 -28 3993 87 20 14 chr2 10080142 10080693 -243175890 + MER41A LTR ERV1 1 554 0 1362 211 111 75 chr2 10082089 10082469 -243174114 + MLT1C LTR MaLR 1 401 -66 1890 98 62 0 chr2 10082469 10082745 -243173838 - AluSx SINE Alu -19 293 1 1362 211 111 75 chr2 10082745 10082815 -243173768 + MLT1C LTR MaLR 401 467 0 520 242 43 12 chr2 10084120 10084281 -243172302 - MLT1F LTR MaLR -7 535 370 1488 154 68 39 chr2 10084444 10084724 -243171859 + AluJo SINE Alu 2 289 -23 2334 70 13 3 chr2 10085184 10085485 -243171098 - AluY SINE Alu -7 304 1 580 293 55 6 chr2 10085953 10086117 -243170466 + MER5B DNA MER1_type 2 173 -5 1790 161 3 3 chr2 10087495 10087787 -243168796 - AluJb SINE Alu -20 292 1 435 276 69 35 chr2 10087945 10088148 -243168435 + MLT1J2 LTR MaLR 240 449 -1 251 253 63 63 chr2 10088152 10088247 -243168336 + MIR SINE MIR 162 256 -6 293 251 30 133 chr2 10088449 10088509 -243168074 - MLT1K LTR MaLR 0 588 523 2136 112 0 28 chr2 10088509 10088831 -243167752 + AluSq SINE Alu 1 313 0 293 251 30 133 chr2 10088831 10088973 -243167610 - MLT1K LTR MaLR -65 523 407 319 322 202 8 chr2 10089479 10089737 -243166846 + L3 LINE CR1 1163 1470 -107 2113 89 0 92 chr2 10090234 10090572 -243166011 + AluSc SINE Alu 3 309 0 378 280 0 0 chr2 10090616 10090748 -243165835 + (TG)n Simple_repeat Simple_repeat 1 132 0 228 257 0 0 chr2 10090751 10090864 -243165719 + (TGAG)n Simple_repeat Simple_repeat 4 116 0 389 222 20 6 chr2 10090897 10091245 -243165338 + (TG)n Simple_repeat Simple_repeat 1 353 0 285 262 30 30 chr2 10091245 10091409 -243165174 + (TGAG)n Simple_repeat Simple_repeat 3 166 0 215 326 116 0 chr2 10092617 10092746 -243163837 + MIR SINE MIR 104 247 -15 391 304 9 7 chr2 10092767 10092894 -243163689 + MIR SINE MIR 16 138 -70 180 295 95 11 chr2 10093228 10093323 -243163260 - MIR SINE MIR -63 145 43 299 313 50 0 chr2 10095876 10095975 -243160608 - MIR3 SINE MIR -42 166 63 1825 162 14 0 chr2 10096162 10096452 -243160131 - AluJb SINE Alu -18 294 1 304 293 41 41 chr2 10099395 10099518 -243157065 + MIR3 SINE MIR 64 186 -22 256 344 0 22 chr2 10100207 10100297 -243156286 + MIR SINE MIR 174 261 -1 189 242 97 0 chr2 10101028 10101090 -243155493 - MIR SINE MIR -87 121 54 394 335 147 12 chr2 10101174 10101617 -243154966 + L2 LINE L2 2551 3053 -260 1870 261 60 7 chr2 10101727 10102262 -243154321 - L1MD1 LINE L1 -86 6262 5709 1280 344 203 19 chr2 10102263 10103773 -243152810 - L2 LINE L2 -605 2709 922 1407 164 23 34 chr2 10103785 10104048 -243152535 + AluJb SINE Alu 15 274 -38 306 263 20 10 chr2 10104073 10104172 -243152411 + L1MEd LINE L1 46 145 -5974 830 296 47 58 chr2 10104392 10105053 -243151530 + L1MEd LINE L1 602 1255 -4864 29 60 0 0 chr2 10105117 10105167 -243151416 + AT_rich Low_complexity Low_complexity 1 50 0 564 42 0 0 chr2 10105175 10105246 -243151337 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 502 256 31 6 chr2 10105397 10105557 -243151026 + L1ME LINE L1 5389 5552 -610 6656 216 31 29 chr2 10105574 10105707 -243150876 - L1MD1 LINE L1 -769 5377 5246 2108 111 3 7 chr2 10105707 10106005 -243150578 + AluSg SINE Alu 14 310 0 6656 216 31 29 chr2 10106005 10107827 -243148756 - L1MD1 LINE L1 -900 5246 3419 352 336 0 0 chr2 10107846 10107977 -243148606 - L2 LINE L2 -2382 932 802 247 390 138 8 chr2 10107986 10108240 -243148343 + L2 LINE L2 2978 3264 -8 551 225 61 56 chr2 10108257 10108470 -243148113 - HAL1 LINE L1 -695 1812 1599 416 326 14 35 chr2 10108476 10108620 -243147963 - HAL1 LINE L1 -977 1530 1390 238 146 0 83 chr2 10108632 10108680 -243147903 - MER5A DNA MER1_type 0 189 146 230 98 0 49 chr2 10108683 10108724 -243147859 - MER5A DNA MER1_type -150 39 1 367 293 65 78 chr2 10108749 10109043 -243147540 - L1MC5 LINE L1 -199 7762 7473 1581 193 16 16 chr2 10109043 10109383 -243147200 - AluJo SINE Alu 0 342 3 797 254 119 28 chr2 10109394 10109831 -243146752 - HAL1 LINE L1 -1253 1254 778 191 146 24 0 chr2 10109831 10109872 -243146711 + (TG)n Simple_repeat Simple_repeat 1 42 0 231 250 36 88 chr2 10109875 10110067 -243146516 - HAL1 LINE L1 -1723 784 603 347 269 82 106 chr2 10110115 10110371 -243146212 - HAL1 LINE L1 -1987 520 271 2309 93 3 3 chr2 10110455 10110768 -243145815 - AluSq SINE Alu 0 313 1 332 225 0 0 chr2 10112001 10112072 -243144511 - MER53 DNA DNA -2 187 117 306 209 77 0 chr2 10112012 10112103 -243144480 + MER53 DNA DNA 24 121 -68 * 342 279 42 21 chr2 10112738 10112892 -243143691 - MIR SINE MIR -63 145 3 261 57 0 0 chr2 10114821 10114856 -243141727 + (CA)n Simple_repeat Simple_repeat 1 35 0 199 195 0 0 chr2 10116211 10116252 -243140331 - L2 LINE L2 0 3313 3273 242 305 34 68 chr2 10116270 10116388 -243140195 + MER81 DNA DNA 1 114 0 2309 105 0 0 chr2 10116491 10116797 -243139786 - AluSx SINE Alu -6 306 1 338 322 57 48 chr2 10117252 10117479 -243139104 - MIR SINE MIR -3 259 31 1451 113 0 0 chr2 10118154 10118358 -243138225 + AluSg/x SINE Alu 107 310 0 2439 149 29 0 chr2 10118650 10119059 -243137524 - MSTC LTR MaLR 0 428 8 2045 142 7 0 chr2 10119153 10119456 -243137127 - AluSx SINE Alu -7 305 1 726 295 101 47 chr2 10119790 10120217 -243136366 - MLT1J2 LTR MaLR 0 450 1 261 344 116 31 chr2 10120430 10120654 -243135929 - L2 LINE L2 -487 2827 2585 3938 45 0 14 chr2 10121017 10121504 -243135079 + L1PA5 LINE L1 5675 6154 0 1473 249 69 39 chr2 10122284 10122774 -243133809 - MLT1D LTR MaLR 0 505 1 201 284 45 0 chr2 10123366 10123433 -243133150 + MIR SINE MIR 78 147 -61 700 185 8 31 chr2 10123887 10124017 -243132566 + AluJo/FLAM SINE Alu 2 128 -174 1566 135 64 70 chr2 10124019 10124331 -243132252 + AluJb SINE Alu 3 312 0 1822 194 62 36 chr2 10126017 10126404 -243130179 + Charlie1b DNA MER1_type 1 405 -2356 2105 138 0 3 chr2 10126404 10126716 -243129867 - AluSq SINE Alu -1 312 2 1822 194 62 36 chr2 10126716 10126832 -243129751 + Charlie1b DNA MER1_type 405 517 -6 427 305 24 42 chr2 10126909 10127076 -243129507 + MIR SINE MIR 29 192 -70 377 258 32 0 chr2 10127650 10127743 -243128840 + MIR3 SINE MIR 61 156 -52 1852 160 7 3 chr2 10128610 10128904 -243127679 + AluJb SINE Alu 1 295 -17 218 267 11 0 chr2 10128990 10129080 -243127503 + (CA)n Simple_repeat Simple_repeat 2 92 0 528 254 0 0 chr2 10129100 10129277 -243127306 + (CA)n Simple_repeat Simple_repeat 1 177 0 1764 207 72 0 chr2 10129845 10130208 -243126375 + MLT1B LTR MaLR 1 389 -1 184 208 42 21 chr2 10130335 10130383 -243126200 + L2 LINE L2 3223 3271 -1 2190 104 0 0 chr2 10130384 10130681 -243125902 - AluSx SINE Alu -13 299 3 1346 268 107 16 chr2 10131115 10131612 -243124971 + MLT1F LTR MaLR 1 542 0 1645 159 10 7 chr2 10131682 10131971 -243124612 - AluJb SINE Alu -16 296 7 2029 67 50 18 chr2 10132179 10132462 -243124121 + AluY SINE Alu 1 292 -19 3849 108 45 69 chr2 10132680 10133214 -243123369 - MER41B LTR ERV1 0 635 118 2188 80 7 0 chr2 10133214 10133503 -243123080 + AluSc SINE Alu 19 309 0 3849 108 45 69 chr2 10133503 10133619 -243122964 - MER41B LTR ERV1 -517 118 1 209 229 83 0 chr2 10134236 10134284 -243122299 - L2 LINE L2 -1 3271 3220 254 373 49 35 chr2 10134773 10135057 -243121526 - L2 LINE L2 -736 2578 2291 233 330 33 0 chr2 10136003 10136094 -243120489 - MLT1J LTR MaLR -92 419 326 334 252 163 0 chr2 10136097 10136220 -243120363 - MLT1J2 LTR MaLR -307 143 1 207 404 60 6 chr2 10136423 10136589 -243119994 - L2 LINE L2 -1855 1459 1285 321 318 79 39 chr2 10136681 10136961 -243119622 - L2 LINE L2 -2361 953 663 589 266 87 0 chr2 10137247 10137431 -243119152 + MIR SINE MIR 14 213 -49 206 83 56 0 chr2 10137819 10137855 -243118728 + T-rich Low_complexity Low_complexity 2 39 0 2223 114 0 0 chr2 10137870 10138168 -243118415 + AluSx SINE Alu 1 298 -14 1901 127 3 24 chr2 10138168 10138459 -243118124 - AluSx SINE Alu -27 285 1 455 48 16 0 chr2 10138465 10138527 -243118056 + (TTTTC)n Simple_repeat Simple_repeat 3 65 0 861 211 6 34 chr2 10138539 10138714 -243117869 - AluJo SINE Alu -141 171 2 225 0 0 0 chr2 10138728 10138753 -243117830 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 1777 113 0 4 chr2 10138753 10139000 -243117583 - AluSx SINE Alu -66 246 1 1559 160 82 17 chr2 10141262 10141555 -243115028 + AluJo SINE Alu 1 312 0 182 323 48 0 chr2 10142569 10142631 -243113952 - MIR SINE MIR -63 145 81 205 296 31 41 chr2 10142861 10142988 -243113595 - MIR3 SINE MIR -52 156 68 315 267 75 25 chr2 10144834 10144954 -243111629 - L2 LINE L2 -1 3312 3187 736 220 23 0 chr2 10145060 10145233 -243111350 + MER96B DNA MER1_type? 1 177 -240 1581 161 68 0 chr2 10145632 10145912 -243110671 - AluJb SINE Alu -13 299 1 906 169 9 87 chr2 10145922 10146153 -243110430 - L1MB8 LINE L1 -3 6175 5963 914 270 88 47 chr2 10146376 10146739 -243109844 + MLT1J LTR MaLR 33 410 -101 657 266 8 55 chr2 10146770 10147007 -243109576 - L1ME1 LINE L1 -5 6161 5936 250 290 21 11 chr2 10147012 10147105 -243109478 + MLT1J LTR MaLR 414 507 -4 340 295 90 7 chr2 10147201 10147513 -243109070 - LTR16A LTR ERVL -12 438 45 22 35 0 0 chr2 10148405 10148434 -243108149 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr2 10148492 10148515 -243108068 + AT_rich Low_complexity Low_complexity 1 23 0 394 242 10 39 chr2 10148681 10148784 -243107799 - L1MC4 LINE L1 -1339 6983 1995 387 284 23 0 chr2 10148735 10148823 -243107760 + L1MC4 LINE L1 6614 6703 -1339 * 310 357 0 0 chr2 10148786 10148870 -243107713 - L1MC4 LINE L1 -1342 6700 6617 * 369 318 0 0 chr2 10148836 10148924 -243107659 + L1MC4 LINE L1 6615 6702 -1340 360 322 0 0 chr2 10148872 10148959 -243107624 - L1MC4 LINE L1 -1342 6700 6614 * 266 230 23 0 chr2 10148991 10149078 -243107505 + L1MC4 LINE L1 6614 6702 -1340 306 194 0 0 chr2 10149078 10149140 -243107443 + (CA)n Simple_repeat Simple_repeat 1 62 0 1888 139 7 0 chr2 10149150 10149438 -243107145 - AluSq SINE Alu -23 290 1 669 297 107 30 chr2 10149468 10150035 -243106548 - L1ME3A LINE L1 -247 5923 5308 1509 186 4 0 chr2 10150109 10150372 -243106211 + AluJo SINE Alu 37 300 -12 3900 179 27 27 chr2 10150519 10151704 -243104879 - L1MB7 LINE L1 -54 6130 4928 716 165 0 0 chr2 10151707 10151816 -243104767 + AluSp/q SINE Alu 190 298 -15 995 176 5 10 chr2 10151827 10152020 -243104563 - L1MB7 LINE L1 -1215 4931 4740 1018 157 35 0 chr2 10152087 10152259 -243104324 + MER5A DNA MER1_type 1 178 -11 993 156 85 5 chr2 10152279 10152490 -243104093 + MER33 DNA MER1_type 2 229 -95 3033 136 2 6 chr2 10152965 10153443 -243103140 - MER41B LTR ERV1 0 635 160 1261 91 6 0 chr2 10153605 10153781 -243102802 - MER41B LTR ERV1 -458 177 1 1897 121 0 11 chr2 10154282 10154562 -243102021 - AluJb SINE Alu -17 295 19 240 35 0 0 chr2 10154566 10154595 -243101988 + (T)n Simple_repeat Simple_repeat 1 29 0 180 300 60 30 chr2 10154607 10154707 -243101876 - MIR SINE MIR -64 198 96 1247 211 67 58 chr2 10155012 10155358 -243101225 - MLT1A2 LTR MaLR 0 374 26 208 351 75 11 chr2 10156048 10156142 -243100441 + MIR SINE MIR 47 146 -62 2851 184 13 0 chr2 10156198 10156753 -243099830 + L1MB3 LINE L1 4596 5157 -989 2037 98 0 0 chr2 10156780 10157107 -243099476 + AluSx SINE Alu 6 332 0 2408 149 16 24 chr2 10157107 10157560 -243099023 + L1MB3 LINE L1 5495 6172 -11 919 144 17 22 chr2 10157560 10157732 -243098851 + L1MB3 LINE L1 6005 6183 0 2408 149 16 24 chr2 10157732 10157744 -243098839 + L1MB3 LINE L1 6172 6183 0 1826 194 121 16 chr2 10157834 10158257 -243098326 + MLT1C LTR MaLR 1 467 0 501 291 22 6 chr2 10158811 10158993 -243097590 + MLT1J2 LTR MaLR 1 185 -265 26 64 0 0 chr2 10159946 10159993 -243096590 + GC_rich Low_complexity Low_complexity 1 47 0 22 35 0 0 chr2 10160193 10160222 -243096361 + GC_rich Low_complexity Low_complexity 1 29 0 245 197 0 42 chr2 10160234 10160305 -243096278 + C-rich Low_complexity Low_complexity 6 73 0 23 0 0 0 chr2 10160329 10160352 -243096231 + GC_rich Low_complexity Low_complexity 1 23 0 22 70 0 0 chr2 10160513 10160556 -243096027 + GC_rich Low_complexity Low_complexity 1 43 0 198 304 14 0 chr2 10161216 10161285 -243095298 + MIR SINE MIR 77 146 -62 22 0 0 0 chr2 10162645 10162667 -243093916 + AT_rich Low_complexity Low_complexity 1 22 0 633 259 68 18 chr2 10165689 10165909 -243090674 - L1MB7 LINE L1 -18 6166 5936 231 61 0 0 chr2 10166301 10166334 -243090249 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 577 219 42 8 chr2 10166346 10166465 -243090118 + FLAM_A SINE Alu 1 123 -10 1860 164 3 0 chr2 10166466 10166753 -243089830 - AluJo SINE Alu -19 293 6 195 267 65 40 chr2 10166763 10166882 -243089701 - MIR SINE MIR -67 141 23 811 188 2 14 chr2 10169180 10169703 -243086880 + (CAT)n Simple_repeat Simple_repeat 1 516 0 873 148 11 6 chr2 10169723 10169899 -243086684 + (CAT)n Simple_repeat Simple_repeat 1 177 0 835 169 0 22 chr2 10169875 10170059 -243086524 + (CACCAT)n Simple_repeat Simple_repeat 1 180 0 * 219 261 0 0 chr2 10170086 10170155 -243086428 + (CCA)n Simple_repeat Simple_repeat 1 69 0 815 200 0 6 chr2 10170175 10170355 -243086228 + (CAT)n Simple_repeat Simple_repeat 1 179 0 262 326 22 11 chr2 10171081 10171170 -243085413 + MIR3 SINE MIR 103 192 -16 2253 88 0 10 chr2 10171275 10171580 -243085003 + AluSg SINE Alu 1 302 -8 2471 40 0 7 chr2 10172434 10172734 -243083849 + AluY SINE Alu 1 298 -13 403 255 103 14 chr2 10172782 10172927 -243083656 + L1ME4a LINE L1 5964 6121 0 2077 108 0 0 chr2 10173155 10173443 -243083140 + AluSx SINE Alu 7 294 -18 2049 137 0 0 chr2 10174842 10175142 -243081441 - AluSx SINE Alu -12 300 1 290 315 36 36 chr2 10175142 10175243 -243081340 - L2 LINE L2 -15 3298 3195 279 0 0 0 chr2 10176995 10177026 -243079557 + (GGGTG)n Simple_repeat Simple_repeat 4 34 0 264 59 0 0 chr2 10177156 10177190 -243079393 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 2182 101 156 6 chr2 10177677 10178042 -243078541 + MSTA LTR MaLR 2 421 -7 264 59 0 0 chr2 10178161 10178195 -243078388 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 252 291 95 76 chr2 10178198 10178408 -243078175 - L2 LINE L2 -27 3286 3073 2798 125 26 0 chr2 10178410 10178827 -243077756 - MSTA LTR MaLR 0 428 1 2693 172 13 37 chr2 10178877 10179418 -243077165 - L1MB7 LINE L1 -14 6170 5643 1596 208 0 0 chr2 10179435 10179747 -243076836 - AluJo SINE Alu 0 312 1 450 273 43 14 chr2 10179748 10179887 -243076696 - L2 LINE L2 -241 3072 2930 693 264 159 85 chr2 10179982 10180335 -243076248 + MLT1J LTR MaLR 234 508 -3 434 230 8 71 chr2 10181147 10181273 -243075310 - L2 LINE L2 0 3313 3196 233 264 72 56 chr2 10181802 10181927 -243074656 + MIR SINE MIR 32 158 -104 2240 90 3 34 chr2 10182235 10182557 -243074026 - AluSx SINE Alu 0 312 1 531 140 0 140 chr2 10182566 10182702 -243073881 - FRAM SINE Alu -8 168 52 238 317 146 8 chr2 10182763 10182886 -243073697 - MIR SINE MIR -66 196 57 388 311 78 36 chr2 10184831 10185024 -243071559 + MIR SINE MIR 50 250 -12 451 288 0 8 chr2 10185611 10185729 -243070854 - MIR SINE MIR -63 145 29 213 208 75 0 chr2 10185719 10185772 -243070811 + L2 LINE L2 3206 3262 -10 * 1722 183 38 2 chr2 10185776 10186228 -243070355 + MLT2B1 LTR ERVL 1 519 -1 776 163 7 15 chr2 10186410 10186545 -243070038 - FLAM_C SINE Alu -1 142 9 1342 246 82 19 chr2 10186627 10187090 -243069493 + MLT1D LTR MaLR 1 492 -13 1570 196 48 16 chr2 10187837 10188210 -243068373 - MLT1B LTR MaLR 0 390 6 949 253 145 15 chr2 10189994 10190394 -243066189 - MER31B LTR ERV1 -5 461 10 1421 194 16 44 chr2 10191628 10191735 -243064848 + AluJo SINE Alu 3 111 -201 189 0 0 0 chr2 10191735 10191756 -243064827 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1421 194 16 44 chr2 10191756 10191967 -243064616 + AluJo SINE Alu 111 312 0 373 224 94 151 chr2 10191972 10192120 -243064463 - L1ME2 LINE L1 -240 5924 5794 1835 134 29 0 chr2 10192120 10192397 -243064186 - AluJb SINE Alu -22 290 6 373 224 94 151 chr2 10192397 10192493 -243064090 - L1ME2 LINE L1 -370 5794 5694 1454 194 168 60 chr2 10192509 10193024 -243063559 + MLT1F1 LTR MaLR 1 566 -1 556 309 45 56 chr2 10193040 10193377 -243063206 - L1P5 LINE L1 -498 5658 5326 261 263 15 36 chr2 10193634 10193771 -243062812 - L1ME2 LINE L1 -770 5376 5243 229 313 199 0 chr2 10193774 10193940 -243062643 - L1ME LINE L1 -218 5903 5705 1015 257 34 81 chr2 10193940 10194163 -243062420 - MLT1I LTR MaLR 0 409 210 1668 176 0 26 chr2 10194163 10194476 -243062107 - AluJo SINE Alu -6 306 2 1015 257 34 81 chr2 10194476 10194637 -243061946 - MLT1I LTR MaLR -199 210 43 290 305 81 26 chr2 10194963 10195133 -243061450 - MIR SINE MIR -71 137 5 1094 203 17 17 chr2 10195506 10195743 -243060840 + L1MB7 LINE L1 5894 6130 -54 351 294 59 10 chr2 10195822 10195924 -243060659 + MIR SINE MIR 75 181 -81 378 263 0 10 chr2 10196307 10196406 -243060177 - MIR SINE MIR 0 262 165 236 219 16 16 chr2 10196517 10196581 -243060002 + L1MC5 LINE L1 7844 7907 -54 1125 115 0 0 chr2 10196587 10196744 -243059839 - AluSg/x SINE Alu -22 288 132 1464 103 58 137 chr2 10196744 10197073 -243059510 - AluYb8 SINE Alu -15 303 1 347 165 139 0 chr2 10197108 10197194 -243059389 - MIR SINE MIR -84 178 78 271 316 41 10 chr2 10197615 10197713 -243058870 + MIR SINE MIR 66 166 -96 282 316 53 0 chr2 10197990 10198104 -243058479 - MIR SINE MIR -130 132 13 1720 144 36 4 chr2 10198622 10198899 -243057684 + AluJb SINE Alu 21 306 -6 1301 172 24 58 chr2 10199300 10199616 -243056967 + AluJo SINE Alu 1 306 0 248 244 51 0 chr2 10200006 10200084 -243056499 - L2 LINE L2 -329 2984 2903 404 169 12 36 chr2 10202117 10202283 -243054300 + (TCTCTG)n Simple_repeat Simple_repeat 6 167 0 420 228 0 0 chr2 10202322 10202493 -243054090 + CT-rich Low_complexity Low_complexity 2 172 0 390 162 34 34 chr2 10202466 10202645 -243053938 + (TCTCTG)n Simple_repeat Simple_repeat 2 180 0 * 406 239 115 8 chr2 10202721 10202851 -243053732 + MIR SINE MIR 62 205 -57 1901 146 14 0 chr2 10202889 10203177 -243053406 - AluJo SINE Alu -16 296 5 257 200 115 62 chr2 10203212 10203342 -243053241 - L1ME4a LINE L1 -3 6118 5982 209 129 0 48 chr2 10203423 10203485 -243053098 + (TG)n Simple_repeat Simple_repeat 1 59 0 2236 104 3 0 chr2 10205594 10205901 -243050682 + AluSx SINE Alu 3 310 -2 1732 166 0 48 chr2 10205906 10206219 -243050364 + AluJo SINE Alu 1 298 -14 2469 59 13 0 chr2 10206851 10207157 -243049426 + AluY SINE Alu 2 311 0 1739 132 75 4 chr2 10207744 10208024 -243048559 - AluJo SINE Alu -12 300 1 4039 155 46 9 chr2 10208024 10208900 -243047683 + L1MB8 LINE L1 5152 6058 -120 1880 162 0 3 chr2 10208900 10209209 -243047374 + AluJo SINE Alu 1 308 -4 1991 113 14 0 chr2 10209321 10209604 -243046979 - AluSx SINE Alu -2 310 24 278 333 0 11 chr2 10210530 10210617 -243045966 + MIR SINE MIR 60 145 -63 1766 135 26 26 chr2 10210982 10211286 -243045297 - AluJb SINE Alu -8 304 1 329 179 51 26 chr2 10211288 10211366 -243045217 + MER58 DNA MER1_type 174 253 -88 327 255 103 49 chr2 10211480 10211684 -243044899 - L3 LINE CR1 -102 1475 1261 239 394 92 4 chr2 10212337 10212588 -243043995 - L2 LINE L2 -8 3264 2992 2795 6 0 0 chr2 10212594 10212905 -243043678 + AluYa5 SINE Alu 1 311 0 294 268 89 73 chr2 10213520 10213643 -243042940 - MIR SINE MIR -65 197 73 287 295 181 7 chr2 10213905 10214054 -243042529 - MIR SINE MIR -59 203 29 1363 135 5 0 chr2 10214342 10214549 -243042034 + AluJo SINE Alu 87 294 -18 291 235 4 12 chr2 10215685 10215767 -243040816 - FLAM_A SINE Alu -6 127 73 3450 141 55 110 chr2 10215771 10216601 -243039982 + LTR1 LTR ERV1 1 785 0 1868 113 31 14 chr2 10217840 10218131 -243038452 - AluSx SINE Alu -16 296 1 198 0 0 0 chr2 10218685 10218707 -243037876 + (GA)n Simple_repeat Simple_repeat 2 23 0 1859 139 32 0 chr2 10219141 10219422 -243037161 - AluSq SINE Alu -13 300 11 597 200 42 28 chr2 10219435 10219619 -243036964 - MIR SINE MIR -65 197 10 241 254 0 0 chr2 10220331 10220386 -243036197 - MIR SINE MIR -76 132 78 888 203 0 0 chr2 10220409 10220567 -243036016 + AluJb SINE Alu 147 304 -8 491 252 27 27 chr2 10221014 10221161 -243035422 + MER5A DNA MER1_type 38 184 -5 265 279 31 4 chr2 10221172 10221278 -243035305 + MIR SINE MIR 35 143 -65 1936 141 3 3 chr2 10222011 10222309 -243034274 - AluJb SINE Alu -14 298 1 2236 89 3 6 chr2 10223647 10223960 -243032623 - AluSx SINE Alu 0 312 1 1346 143 48 0 chr2 10224703 10224939 -243031644 - AluJo SINE Alu 0 310 65 330 268 0 0 chr2 10225305 10225428 -243031155 + (TG)n Simple_repeat Simple_repeat 2 124 0 526 268 6 3 chr2 10225501 10225815 -243030768 + (TG)n Simple_repeat Simple_repeat 1 315 0 259 258 206 0 chr2 10228228 10228325 -243028258 + MIR SINE MIR 33 149 -59 338 331 51 34 chr2 10229779 10229957 -243026626 - L2 LINE L2 -18 3254 3074 321 304 98 79 chr2 10232491 10232705 -243023878 - L1ME4a LINE L1 -30 6091 5874 558 335 66 12 chr2 10232983 10233225 -243023358 + MIR SINE MIR 2 256 -6 2169 145 124 0 chr2 10233318 10233697 -243022886 + MSTB LTR MaLR 1 426 0 364 188 124 0 chr2 10233742 10233859 -243022724 + L1ME1 LINE L1 6053 6184 0 2055 126 14 3 chr2 10233868 10234161 -243022422 - AluSx SINE Alu -16 296 1 309 249 29 58 chr2 10234261 10234479 -243022104 + (TATTG)n Simple_repeat Simple_repeat 1 211 0 225 0 0 0 chr2 10235648 10235673 -243020910 + (T)n Simple_repeat Simple_repeat 1 25 0 1007 275 41 9 chr2 10235816 10236158 -243020425 - MLT1A2 LTR MaLR -17 357 5 278 261 169 32 chr2 10236219 10236468 -243020115 - L1ME4a LINE L1 -8 6113 5831 1015 96 0 7 chr2 10236470 10236606 -243019977 + AluSq/x SINE Alu 1 135 -177 297 369 167 30 chr2 10236919 10237255 -243019328 + L3 LINE CR1 493 874 -703 688 288 73 67 chr2 10238053 10238369 -243018214 + L2 LINE L2 2954 3271 -1 4939 152 63 30 chr2 10239129 10240023 -243016560 + L1MC1 LINE L1 5411 6333 0 1806 142 4 0 chr2 10240515 10240790 -243015793 + AluJo SINE Alu 1 276 -36 2030 126 0 0 chr2 10240797 10241083 -243015500 - AluSx SINE Alu -22 290 5 210 71 0 0 chr2 10241102 10241130 -243015453 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 1009 164 36 76 chr2 10241170 10241395 -243015188 - MER20 DNA MER1_type -2 217 2 219 36 0 0 chr2 10241441 10241469 -243015114 + (CA)n Simple_repeat Simple_repeat 2 29 0 278 290 238 28 chr2 10241896 10242182 -243014401 - L2 LINE L2 -30 3242 2897 2084 80 76 0 chr2 10242264 10242539 -243014044 + AluSc SINE Alu 1 296 -13 186 271 212 42 chr2 10242741 10242859 -243013724 + MER5A DNA MER1_type 17 154 -35 246 289 106 0 chr2 10245193 10245297 -243011286 + MIR3 SINE MIR 47 161 -47 204 40 0 0 chr2 10245301 10245326 -243011257 + (TTTTC)n Simple_repeat Simple_repeat 5 29 0 1001 220 119 42 chr2 10246245 10246424 -243010159 + MLT1A2 LTR MaLR 1 165 -209 3231 150 10 2 chr2 10246424 10246903 -243009680 + MER66B LTR ERV1 1 483 -3 1001 220 119 42 chr2 10246903 10247059 -243009524 + MLT1A2 LTR MaLR 165 362 -12 744 298 59 12 chr2 10247064 10247403 -243009180 - L1ME3A LINE L1 -258 5912 5558 1071 186 70 64 chr2 10248848 10249176 -243007407 - L1MB7 LINE L1 0 6184 5855 2091 98 0 7 chr2 10249186 10249472 -243007111 - AluSg1 SINE Alu -25 284 1 1730 168 7 0 chr2 10249473 10249765 -243006818 - AluJo SINE Alu -18 294 1 494 238 79 0 chr2 10249765 10249929 -243006654 - L1M4 LINE L1 -2561 3585 3409 798 258 58 48 chr2 10249967 10250232 -243006351 - MIR SINE MIR 0 262 1 246 269 156 50 chr2 10250821 10250962 -243005621 - MIR3 SINE MIR -19 189 34 1749 189 0 0 chr2 10251259 10251566 -243005017 + AluJo SINE Alu 3 309 -3 1035 234 58 23 chr2 10251926 10252216 -243004367 + L1MC1 LINE L1 6013 6316 -17 1840 171 7 3 chr2 10252216 10252521 -243004062 - AluJb SINE Alu -6 306 1 1035 234 58 23 chr2 10252521 10252538 -243004045 + L1MC1 LINE L1 6316 6331 -2 414 0 0 0 chr2 10252538 10252584 -243003999 + (CA)n Simple_repeat Simple_repeat 2 47 0 322 193 174 28 chr2 10252780 10252889 -243003694 - L2 LINE L2 -3 3269 3145 562 266 23 60 chr2 10253107 10253325 -243003258 + MIR SINE MIR 21 226 -36 1431 84 0 0 chr2 10256633 10257031 -242999552 + (CCA)n Simple_repeat Simple_repeat 1 398 0 458 327 199 6 chr2 10257288 10257649 -242998934 - L2 LINE L2 -20 3293 2863 306 148 0 0 chr2 10258168 10258222 -242998361 + (CA)n Simple_repeat Simple_repeat 1 54 0 215 234 0 0 chr2 10259069 10259116 -242997467 - L2 LINE L2 -10 3262 3216 2294 81 10 0 chr2 10259316 10259624 -242996959 - AluSx SINE Alu -1 311 1 244 369 117 0 chr2 10259669 10259780 -242996803 + L2 LINE L2 3139 3262 -10 26 30 0 0 chr2 10260665 10260698 -242995885 + AT_rich Low_complexity Low_complexity 1 33 0 193 340 19 19 chr2 10260718 10260824 -242995759 - MIR3 SINE MIR -21 187 82 450 0 0 0 chr2 10260879 10260929 -242995654 + (TG)n Simple_repeat Simple_repeat 1 50 0 2043 108 4 0 chr2 10260929 10261207 -242995376 - AluSx SINE Alu -33 279 1 382 263 78 62 chr2 10262469 10262648 -242993935 - MIR SINE MIR -56 206 25 237 191 0 48 chr2 10264813 10264876 -242991707 - L2 LINE L2 -12 3260 3201 568 284 214 23 chr2 10264880 10265222 -242991361 - L2 LINE L2 -3 3310 2904 262 360 80 28 chr2 10265248 10265498 -242991085 - L2 LINE L2 -96 3176 2914 1236 199 40 46 chr2 10266316 10266642 -242989941 - MER33 DNA MER1_type 0 324 1 2085 115 10 10 chr2 10267202 10267514 -242989069 - AluSx SINE Alu 0 312 1 279 190 0 0 chr2 10267828 10267886 -242988697 + T-rich Low_complexity Low_complexity 1 58 0 389 310 155 34 chr2 10269189 10269428 -242987155 - HAL1 LINE L1 -1837 670 403 799 288 35 63 chr2 10269450 10269625 -242986958 - MLT1J2 LTR MaLR -2 448 270 764 262 15 34 chr2 10269625 10269831 -242986752 + MER105 DNA DNA 1 202 -2 799 288 35 63 chr2 10269831 10270082 -242986501 - MLT1J2 LTR MaLR -180 270 34 186 276 40 40 chr2 10270121 10270197 -242986386 + L2 LINE L2 204 279 -3035 198 262 0 0 chr2 10271453 10271495 -242985088 + MIR SINE MIR 35 76 -186 1785 163 15 66 chr2 10271709 10272102 -242984481 - MLT1B LTR MaLR -17 373 1 329 150 175 0 chr2 10273612 10273692 -242982891 - MLT1C LTR MaLR -369 98 5 567 140 20 20 chr2 10273950 10274050 -242982533 + FLAM_C SINE Alu 34 133 -10 2275 106 0 0 chr2 10274505 10274808 -242981775 + AluSq SINE Alu 1 303 -10 262 296 28 0 chr2 10274909 10275017 -242981566 - L1MC4a LINE L1 -1869 5939 5829 314 290 76 0 chr2 10275031 10275162 -242981421 - L1MC4a LINE L1 -2084 5724 5584 1616 186 21 0 chr2 10275196 10275481 -242981102 + AluJo SINE Alu 13 303 -9 1784 131 42 48 chr2 10275559 10275683 -242980900 + AluSx SINE Alu 1 124 -188 228 35 0 0 chr2 10275683 10275712 -242980871 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 1784 131 42 48 chr2 10275712 10275899 -242980684 + AluSx SINE Alu 124 310 -2 2237 112 0 3 chr2 10276352 10276666 -242979917 + AluSq SINE Alu 1 313 0 1419 171 91 25 chr2 10277634 10277920 -242978663 - AluSq SINE Alu -8 305 1 245 328 172 0 chr2 10278039 10278173 -242978410 - MIR SINE MIR -2 260 104 2033 129 10 0 chr2 10278188 10278482 -242978101 - AluSx SINE Alu -15 297 1 1881 161 3 0 chr2 10278856 10279155 -242977428 + AluJo SINE Alu 13 312 0 384 329 97 35 chr2 10280008 10280236 -242976347 - L1ME3 LINE L1 -1 6161 5920 241 298 53 10 chr2 10280674 10280793 -242975790 + MIR SINE MIR 38 159 -66 2474 53 0 3 chr2 10281235 10281535 -242975048 + AluY SINE Alu 1 299 -12 199 267 218 10 chr2 10281835 10281936 -242974647 + MIR SINE MIR 141 262 0 236 341 34 0 chr2 10283000 10283088 -242973495 - MIR SINE MIR -78 184 94 747 186 0 0 chr2 10285553 10285682 -242970901 - FLAM_A SINE Alu 0 133 5 247 214 36 0 chr2 10286592 10286648 -242969935 - MLT2A2 LTR ERVL -3 450 393 801 196 0 0 chr2 10286649 10286916 -242969667 + (TGGA)n Simple_repeat Simple_repeat 1 267 0 975 147 0 0 chr2 10286935 10287112 -242969471 + (TGGA)n Simple_repeat Simple_repeat 3 179 0 825 176 0 0 chr2 10287128 10287304 -242969279 + (TGGA)n Simple_repeat Simple_repeat 4 179 0 1195 206 142 55 chr2 10287312 10287748 -242968835 - MLT2B1 LTR ERVL -46 474 1 2263 89 13 0 chr2 10288047 10288349 -242968234 + AluY SINE Alu 1 306 -5 181 185 222 0 chr2 10288467 10288521 -242968062 - L3 LINE CR1 -408 1169 1104 275 309 37 0 chr2 10288847 10288928 -242967655 - L3 LINE CR1 -533 1044 961 499 299 86 8 chr2 10288966 10289204 -242967379 - MIR SINE MIR 0 262 15 187 93 47 0 chr2 10290594 10290637 -242965946 + (TG)n Simple_repeat Simple_repeat 1 45 0 310 162 54 24 chr2 10290656 10290956 -242965627 + (TG)n Simple_repeat Simple_repeat 1 309 0 330 118 45 56 chr2 10290990 10291168 -242965415 + (TG)n Simple_repeat Simple_repeat 1 176 0 200 220 50 10 chr2 10291842 10291942 -242964641 + (TG)n Simple_repeat Simple_repeat 1 104 0 439 257 37 0 chr2 10292757 10292866 -242963717 - MER53 DNA DNA 0 189 77 303 224 103 9 chr2 10293663 10293779 -242962804 + MIR3 SINE MIR 15 141 -67 238 289 192 19 chr2 10294886 10295386 -242961197 - L1MC4a LINE L1 -1838 5970 5325 1956 126 14 7 chr2 10295386 10295679 -242960904 + AluSx SINE Alu 1 295 -17 238 289 192 19 chr2 10295679 10295767 -242960816 - L1MC4a LINE L1 -2483 5325 5254 312 296 112 8 chr2 10295803 10295928 -242960655 - L1MC4a LINE L1 -1085 5061 4924 207 250 0 94 chr2 10295929 10296025 -242960558 + MER5A DNA MER1_type 85 171 -18 230 250 100 12 chr2 10295942 10296022 -242960561 - MER5B DNA MER1_type -70 108 22 1694 167 31 0 chr2 10298384 10298671 -242957912 - AluJb SINE Alu -16 296 1 1998 108 7 7 chr2 10300135 10300423 -242956160 - AluJb SINE Alu -12 300 13 2056 98 0 0 chr2 10303062 10303336 -242953247 - AluSx SINE Alu -15 297 24 2264 75 3 23 chr2 10303556 10303863 -242952720 - AluSp SINE Alu -12 301 1 21 82 0 0 chr2 10304404 10304453 -242952130 + AT_rich Low_complexity Low_complexity 1 49 0 27 49 0 0 chr2 10305464 10305505 -242951078 + GC_rich Low_complexity Low_complexity 1 41 0 21 0 0 0 chr2 10305624 10305645 -242950938 + GC_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr2 10305708 10305735 -242950848 + GC_rich Low_complexity Low_complexity 1 27 0 26 93 0 0 chr2 10305848 10305923 -242950660 + GC_rich Low_complexity Low_complexity 1 75 0 278 128 26 26 chr2 10305979 10306057 -242950526 + (CCCCG)n Simple_repeat Simple_repeat 4 81 0 22 0 0 0 chr2 10306106 10306128 -242950455 + GC_rich Low_complexity Low_complexity 1 22 0 352 244 12 0 chr2 10307004 10307086 -242949497 + MIR SINE MIR 42 124 -84 189 121 0 0 chr2 10307197 10307230 -242949353 + (TGAA)n Simple_repeat Simple_repeat 3 35 0 2137 116 13 0 chr2 10308259 10308560 -242948023 - AluSx SINE Alu -7 305 1 344 328 37 8 chr2 10308715 10308849 -242947734 + MIR3 SINE MIR 65 202 -6 186 43 0 0 chr2 10309005 10309028 -242947555 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1987 112 0 0 chr2 10309036 10309312 -242947271 - AluSx SINE Alu -36 276 1 729 322 25 12 chr2 10309616 10309939 -242946644 + MARNA DNA Mariner 231 557 -29 2087 116 0 13 chr2 10310118 10310421 -242946162 - AluSx SINE Alu -13 299 1 237 262 68 19 chr2 10311647 10311750 -242944833 - L2 LINE L2 -25 3247 3140 183 100 0 0 chr2 10312396 10312426 -242944157 + (GGGAGA)n Simple_repeat Simple_repeat 3 32 0 480 301 75 0 chr2 10312716 10312902 -242943681 - MLT1L LTR MaLR -52 563 364 626 182 115 24 chr2 10313119 10313284 -242943299 + MLT1C LTR MaLR 1 180 -210 1350 161 4 37 chr2 10313284 10313527 -242943056 + AluJo SINE Alu 1 235 -77 1112 217 64 4 chr2 10313548 10313797 -242942786 + MLT1C LTR MaLR 199 462 -5 400 195 164 23 chr2 10314023 10314151 -242942432 + MLT1G LTR MaLR 443 588 -2 451 278 198 0 chr2 10314266 10314428 -242942155 + MIR SINE MIR 17 210 -52 2220 223 63 92 chr2 10314439 10314496 -242942087 - MER97a DNA MER1_type? -11 883 826 3157 75 36 32 chr2 10314496 10314938 -242941645 - MLT2A1 LTR ERVL 0 444 1 2220 223 63 92 chr2 10314938 10315787 -242940796 - MER97a DNA MER1_type? -68 826 3 2248 79 3 7 chr2 10316119 10316422 -242940161 + AluY SINE Alu 1 302 -9 2011 134 7 0 chr2 10317289 10317588 -242938995 - AluSx SINE Alu -9 303 3 181 244 44 0 chr2 10317645 10317690 -242938893 - L2 LINE L2 -1 3312 3266 850 227 0 45 chr2 10318803 10318921 -242937662 + MER3 DNA MER1_type 21 128 -81 2280 99 3 0 chr2 10318921 10319225 -242937358 - AluSq SINE Alu -8 305 1 850 227 0 45 chr2 10319225 10319304 -242937279 + MER3 DNA MER1_type 128 209 0 480 286 16 49 chr2 10320048 10320233 -242936350 + MIR3 SINE MIR 15 193 -15 567 265 46 7 chr2 10320450 10320601 -242935982 + MIR SINE MIR 20 176 -86 1030 113 0 0 chr2 10320669 10320810 -242935773 + AluJb SINE Alu 1 141 -171 189 0 0 0 chr2 10320828 10320849 -242935734 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1560 139 44 26 chr2 10320867 10321140 -242935443 + AluJo SINE Alu 5 282 -30 459 78 0 0 chr2 10321234 10321298 -242935285 + (TCCC)n Simple_repeat Simple_repeat 4 67 0 949 134 92 46 chr2 10321397 10321614 -242934969 - L1MC2 LINE L1 -9 6335 6109 1400 149 0 69 chr2 10321625 10321901 -242934682 - AluJb SINE Alu -6 306 50 398 293 38 25 chr2 10322126 10322283 -242934300 + MER5B DNA MER1_type 11 169 -9 2021 121 17 0 chr2 10322384 10322682 -242933901 - AluSx SINE Alu -8 304 2 2507 50 0 0 chr2 10322692 10322989 -242933594 - AluY SINE Alu -14 297 1 1788 155 20 0 chr2 10323603 10323900 -242932683 + AluJo SINE Alu 1 303 -9 714 118 0 152 chr2 10325156 10325189 -242931394 - L1MB5 LINE L1 -10 6164 6128 225 0 0 0 chr2 10325189 10325214 -242931369 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1975 127 0 0 chr2 10325214 10325497 -242931086 - AluSx SINE Alu -29 283 1 714 118 0 152 chr2 10325497 10325526 -242931057 - L1MB5 LINE L1 -45 6129 6097 2202 74 3 0 chr2 10325526 10325832 -242930751 + AluSp SINE Alu 1 307 0 714 118 0 152 chr2 10325832 10325943 -242930640 - L1MB5 LINE L1 -77 6097 6014 1810 149 3 14 chr2 10325991 10326286 -242930297 - AluJo SINE Alu -20 292 1 504 229 186 32 chr2 10327920 10328108 -242928475 - MIR SINE MIR -17 245 29 483 263 94 52 chr2 10328450 10328663 -242927920 + MIR SINE MIR 20 241 -21 653 244 34 11 chr2 10328955 10329131 -242927452 + MIR SINE MIR 36 215 -47 23 54 0 0 chr2 10329290 10329327 -242927256 + AT_rich Low_complexity Low_complexity 1 37 0 218 316 25 0 chr2 10329402 10329481 -242927102 - MIR SINE MIR -29 233 153 1781 161 3 7 chr2 10330157 10330462 -242926121 - AluJb SINE Alu -8 304 1 183 303 252 0 chr2 10330846 10330965 -242925618 + MIR SINE MIR 51 199 -63 2578 40 0 0 chr2 10331305 10331607 -242924976 - AluY SINE Alu -9 302 1 756 103 154 0 chr2 10331908 10332025 -242924558 - AluJb SINE Alu -176 136 2 193 329 0 0 chr2 10332602 10332672 -242923911 - MIR SINE MIR -116 146 77 517 127 59 3 chr2 10334089 10334309 -242922274 + AluSx SINE Alu 1 306 -4 608 246 24 12 chr2 10334467 10334634 -242921949 + MER20 DNA MER1_type 36 204 -15 261 98 0 0 chr2 10334705 10334746 -242921837 + (TTCA)n Simple_repeat Simple_repeat 4 44 0 245 300 71 41 chr2 10334800 10334970 -242921613 - L2 LINE L2 -101 3171 2997 254 300 25 0 chr2 10335983 10336063 -242920520 + L2 LINE L2 2997 3078 -194 330 298 141 16 chr2 10337233 10337424 -242919159 - MIR SINE MIR 0 262 48 1058 189 0 0 chr2 10337495 10337659 -242918924 - AluJo SINE Alu -14 298 135 318 50 0 0 chr2 10337660 10337700 -242918883 + (TTTTC)n Simple_repeat Simple_repeat 1 40 0 374 183 0 12 chr2 10337711 10337793 -242918790 + CT-rich Low_complexity Low_complexity 2 82 0 366 357 138 19 chr2 10337793 10338216 -242918367 - HAL1 LINE L1 -1206 1301 881 637 197 7 7 chr2 10338217 10338369 -242918214 + CT-rich Low_complexity Low_complexity 1 152 0 333 177 76 13 chr2 10338369 10338448 -242918135 - AluJo SINE Alu -169 133 50 187 98 0 49 chr2 10338459 10338500 -242918083 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 530 228 49 0 chr2 10338502 10338625 -242917958 - AluJo SINE Alu -173 129 1 421 304 30 0 chr2 10339021 10339156 -242917427 + MLT1H LTR MaLR 406 544 -5 2987 241 70 14 chr2 10339602 10340361 -242916222 - MER21B LTR ERV1 -44 819 19 267 238 60 12 chr2 10340359 10340443 -242916140 - MER21B LTR ERV1 -757 106 19 * 373 186 10 98 chr2 10340442 10340544 -242916039 - MER21B LTR ERV1 -758 105 13 448 297 145 56 chr2 10340964 10341483 -242915100 - L1ME4a LINE L1 -104 6017 5401 2320 122 0 0 chr2 10341483 10341795 -242914788 + AluSx SINE Alu 1 312 0 448 297 145 56 chr2 10341795 10341958 -242914625 - L1ME4a LINE L1 -720 5401 5254 390 314 66 39 chr2 10342258 10342516 -242914067 - L1ME4a LINE L1 -1276 4870 4606 694 167 0 9 chr2 10342527 10342641 -242913942 + FLAM_C SINE Alu 14 126 -17 43 20 0 0 chr2 10342652 10342702 -242913881 + AT_rich Low_complexity Low_complexity 1 50 0 494 297 100 46 chr2 10342702 10343373 -242913210 - L1ME4a LINE L1 -1526 4620 3914 315 0 0 0 chr2 10343386 10343421 -242913162 + (TG)n Simple_repeat Simple_repeat 1 35 0 308 209 185 61 chr2 10343591 10343888 -242912695 + L1ME4a LINE L1 5788 6121 0 377 294 14 25 chr2 10344185 10344359 -242912224 + MIR SINE MIR 17 188 -60 917 263 58 11 chr2 10346028 10346393 -242910190 - HAL1 LINE L1 -1126 1381 1000 247 279 93 66 chr2 10346497 10346628 -242909955 - HAL1 LINE L1 -1651 856 717 2726 36 0 7 chr2 10346628 10346935 -242909648 - AluY SINE Alu -6 305 1 247 279 93 66 chr2 10346935 10346986 -242909597 - HAL1 LINE L1 -1790 717 669 2214 128 0 6 chr2 10347933 10348246 -242908337 - AluSx SINE Alu -1 311 1 273 324 46 17 chr2 10348591 10348764 -242907819 + L3 LINE CR1 1056 1233 -344 2741 205 13 8 chr2 10348781 10349395 -242907188 + L1MB7 LINE L1 4465 5081 -1065 1485 114 5 0 chr2 10349423 10349616 -242906967 + AluSq SINE Alu 1 194 -119 2415 162 54 2 chr2 10349655 10350136 -242906447 + L1MB7 LINE L1 5660 6165 -19 2362 108 0 3 chr2 10350285 10350590 -242905993 + AluSq SINE Alu 1 304 -9 380 290 30 77 chr2 10350610 10350779 -242905804 + L3 LINE CR1 1415 1575 -2 345 227 0 52 chr2 10351662 10351759 -242904824 - MIR SINE MIR -78 130 39 910 140 11 11 chr2 10352372 10352551 -242904032 + CT-rich Low_complexity Low_complexity 2 180 0 223 147 0 0 chr2 10352551 10352585 -242903998 + (TTCC)n Simple_repeat Simple_repeat 3 36 0 1071 268 70 6 chr2 10352587 10352901 -242903682 - L1ME LINE L1 -362 5804 5471 2090 102 7 21 chr2 10353677 10353989 -242902594 - AluSx SINE Alu 0 309 2 307 247 34 0 chr2 10354578 10354667 -242901916 - L1MC5 LINE L1 -62 7899 7808 822 157 0 15 chr2 10354821 10354955 -242901628 + FLAM_C SINE Alu 1 132 -1 447 285 99 17 chr2 10355007 10355179 -242901404 - MIR SINE MIR -15 247 62 21 36 0 0 chr2 10355435 10355463 -242901120 + GC_rich Low_complexity Low_complexity 1 28 0 222 37 0 0 chr2 10355962 10355989 -242900594 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 2213 137 0 0 chr2 10356008 10356315 -242900268 + AluSx SINE Alu 1 307 -5 315 254 0 0 chr2 10356350 10356417 -242900166 - MIR SINE MIR -106 156 90 360 233 78 0 chr2 10356428 10356518 -242900065 - MER91A DNA MER1_type -11 185 89 384 262 37 9 chr2 10356994 10357101 -242899482 + L3 LINE CR1 1377 1486 -91 593 269 88 0 chr2 10357962 10358133 -242898450 + MIR SINE MIR 77 262 0 325 234 72 36 chr2 10361143 10361254 -242895329 + MIR SINE MIR 65 179 -83 2239 114 10 0 chr2 10361480 10361786 -242894797 + AluSg SINE Alu 1 309 -1 230 312 18 37 chr2 10362175 10362284 -242894299 + MIR3 SINE MIR 93 199 -9 196 259 37 0 chr2 10363408 10363462 -242893121 + MER5A DNA MER1_type 60 115 -74 1917 123 0 49 chr2 10363513 10363821 -242892762 + AluSx SINE Alu 1 293 -19 520 303 135 14 chr2 10364959 10365256 -242891327 + L1ME4a LINE L1 5534 5866 -255 1701 110 0 9 chr2 10365257 10365485 -242891098 - AluJb SINE Alu -15 297 72 7386 210 60 34 chr2 10365485 10366372 -242890211 + L1ME1 LINE L1 3439 4301 -1865 1846 178 3 3 chr2 10366372 10366676 -242889907 + AluJb SINE Alu 1 304 -8 7386 210 60 34 chr2 10366676 10368428 -242888155 + L1ME1 LINE L1 4301 6160 -6 339 281 0 73 chr2 10369382 10369546 -242887037 + L1ME4a LINE L1 5967 6118 -3 387 0 0 0 chr2 10369550 10369593 -242886990 + (GA)n Simple_repeat Simple_repeat 1 43 0 252 0 0 0 chr2 10369592 10369620 -242886963 + (TG)n Simple_repeat Simple_repeat 2 29 0 * 463 216 114 17 chr2 10369938 10370152 -242886431 - L1ME3 LINE L1 -9 6161 5902 268 213 0 43 chr2 10370155 10370343 -242886240 + (TA)n Simple_repeat Simple_repeat 1 180 0 217 203 0 41 chr2 10370355 10370478 -242886105 + (TA)n Simple_repeat Simple_repeat 2 119 0 794 300 92 13 chr2 10370497 10370877 -242885706 - L1ME3 LINE L1 -254 5916 5507 2282 105 10 0 chr2 10371070 10371376 -242885207 + AluSx SINE Alu 1 309 -3 425 270 93 39 chr2 10371914 10372118 -242884465 + MIR SINE MIR 45 259 -3 209 300 120 27 chr2 10372620 10372770 -242883813 + MIR3 SINE MIR 7 170 -38 1316 296 41 52 chr2 10373296 10373867 -242882716 - L1MEd LINE L1 -4869 1250 689 2352 112 0 3 chr2 10373867 10374171 -242882412 - AluSc SINE Alu -6 303 1 1316 296 41 52 chr2 10374171 10374453 -242882130 - L1MEd LINE L1 -5430 689 406 587 284 134 50 chr2 10374839 10375220 -242881363 - MLT1L LTR MaLR -4 611 199 769 64 54 25 chr2 10375513 10375828 -242880755 + (CA)n Simple_repeat Simple_repeat 1 324 0 643 76 64 18 chr2 10375841 10376012 -242880571 + (CA)n Simple_repeat Simple_repeat 2 180 0 462 119 63 13 chr2 10376044 10376203 -242880380 + (CA)n Simple_repeat Simple_repeat 2 168 0 224 279 27 54 chr2 10376842 10376953 -242879630 + L2 LINE L2 2915 3022 -291 438 295 66 0 chr2 10377059 10377181 -242879402 + L2 LINE L2 3183 3312 -1 1621 196 17 26 chr2 10377901 10378248 -242878335 - MLT1A2 LTR MaLR -7 367 24 180 0 0 0 chr2 10378571 10378591 -242877992 + (GGGA)n Simple_repeat Simple_repeat 2 21 0 339 285 46 31 chr2 10378789 10378919 -242877664 + MLT1B LTR MaLR 235 366 -24 291 279 95 7 chr2 10379789 10379936 -242876647 + (CCCCG)n Simple_repeat Simple_repeat 5 164 0 389 239 18 18 chr2 10381208 10381321 -242875262 - MLT1L LTR MaLR -309 196 84 233 250 22 76 chr2 10382027 10382119 -242874464 + MIR3 SINE MIR 101 187 -21 1163 143 46 6 chr2 10382136 10382512 -242874071 - MSTB LTR MaLR 0 426 1 229 346 59 7 chr2 10382516 10382652 -242873931 - MIR SINE MIR -12 250 108 228 276 75 0 chr2 10383671 10383784 -242872799 - MIR SINE MIR -69 139 30 2525 83 3 0 chr2 10384389 10384691 -242871892 - AluSx SINE Alu -9 303 1 568 233 52 65 chr2 10384782 10385014 -242871569 + MIR SINE MIR 23 251 -11 1529 256 81 5 chr2 10385090 10385511 -242871072 - MLT1J LTR MaLR -58 453 1 2187 112 7 0 chr2 10385566 10385860 -242870723 - AluY SINE Alu -15 296 1 2436 51 3 45 chr2 10385871 10386182 -242870401 - AluY SINE Alu -13 298 1 1880 120 6 70 chr2 10386471 10386787 -242869796 + AluJb SINE Alu 1 296 -16 2345 81 3 10 chr2 10387331 10387626 -242868957 - AluSq SINE Alu -16 297 5 1998 140 20 3 chr2 10387631 10387924 -242868659 - AluSx SINE Alu -14 298 1 233 222 0 0 chr2 10388215 10388260 -242868323 + MIR3 SINE MIR 112 156 -52 434 189 0 115 chr2 10388729 10388851 -242867732 + FLAM_A SINE Alu 1 108 -34 2382 103 3 0 chr2 10388992 10389303 -242867280 + AluSq SINE Alu 1 312 -1 947 219 52 18 chr2 10389572 10390010 -242866573 + MLT1C LTR MaLR 1 467 0 443 303 34 11 chr2 10390164 10390342 -242866241 - ERVL LTR ERVL -2214 3550 3369 2178 139 0 0 chr2 10390770 10391079 -242865504 - AluSx SINE Alu -2 310 2 428 225 71 59 chr2 10392679 10392848 -242863735 + MIR SINE MIR 20 190 -72 299 299 331 0 chr2 10392889 10393046 -242863537 - MIR SINE MIR -48 214 6 219 298 32 48 chr2 10393328 10393452 -242863131 - MIR SINE MIR -68 194 73 216 226 16 16 chr2 10394158 10394220 -242862363 - MER5B DNA MER1_type -110 68 7 1801 78 5 0 chr2 10394702 10394921 -242861662 + AluSg/x SINE Alu 80 299 -11 2350 98 0 7 chr2 10395545 10395851 -242860732 + AluSq SINE Alu 1 304 -9 1739 158 13 43 chr2 10396262 10396566 -242860017 + AluJo SINE Alu 1 295 -17 375 209 6 122 chr2 10396612 10396784 -242859799 + Charlie7 DNA MER1_type 317 468 -2144 1978 250 67 46 chr2 10396801 10397517 -242859066 + MER21B LTR ERV1 22 752 -111 3310 235 113 87 chr2 10397554 10397875 -242858708 + Charlie7 DNA MER1_type 527 838 -1774 2269 99 6 16 chr2 10397875 10398188 -242858395 - AluY SINE Alu -1 310 1 3310 235 113 87 chr2 10398188 10398210 -242858373 + Charlie7 DNA MER1_type 838 858 -1754 1930 136 7 20 chr2 10398210 10398511 -242858072 - AluJo SINE Alu -15 297 1 3310 235 113 87 chr2 10398511 10398891 -242857692 + Charlie7 DNA MER1_type 858 1227 -1385 2783 39 0 0 chr2 10398891 10399202 -242857381 + AluY SINE Alu 1 311 0 3310 235 113 87 chr2 10399202 10399844 -242856739 + Charlie7 DNA MER1_type 1227 1851 -761 2341 96 7 13 chr2 10399844 10400147 -242856436 - AluSx SINE Alu -11 301 1 3310 235 113 87 chr2 10400147 10400720 -242855863 + Charlie7 DNA MER1_type 1851 2522 -90 2196 109 0 3 chr2 10400720 10401024 -242855559 + AluSg SINE Alu 1 303 0 3310 235 113 87 chr2 10401024 10401050 -242855533 + Charlie7 DNA MER1_type 2522 2546 -66 2387 78 7 3 chr2 10401083 10401391 -242855192 + AluYb8 SINE Alu 2 310 -8 915 301 152 12 chr2 10401416 10401924 -242854659 + MLT1H1 LTR MaLR 26 555 0 654 139 18 96 chr2 10402022 10402055 -242854528 - L1MB3 LINE L1 -2 6181 6147 2371 97 0 3 chr2 10402055 10402354 -242854229 + AluSx SINE Alu 1 298 -14 359 21 21 0 chr2 10402358 10402406 -242854177 + (CA)n Simple_repeat Simple_repeat 2 50 0 654 139 18 96 chr2 10402406 10402533 -242854050 - L1MB3 LINE L1 -39 6144 6029 1119 84 0 14 chr2 10402536 10402679 -242853904 + AluSq/x SINE Alu 1 141 -171 2211 121 6 10 chr2 10402679 10402993 -242853590 + AluSq SINE Alu 1 313 0 955 170 37 54 chr2 10402993 10403205 -242853378 - L1MB3 LINE L1 -144 6039 5830 1943 137 9 44 chr2 10403205 10403374 -242853209 - AluSx SINE Alu -8 304 150 606 63 0 0 chr2 10403374 10403453 -242853130 + (TTTC)n Simple_repeat Simple_repeat 2 80 0 1943 137 9 44 chr2 10403453 10403598 -242852985 - AluSx SINE Alu -162 150 1 955 170 37 54 chr2 10403598 10403626 -242852957 - L1MB3 LINE L1 -353 5830 5803 2136 128 7 0 chr2 10403626 10403922 -242852661 + AluSx SINE Alu 1 298 -14 1785 188 114 53 chr2 10404761 10405250 -242851333 + MLT2B1 LTR ERVL 2 520 0 375 256 120 23 chr2 10406850 10406983 -242849600 - MLT1J LTR MaLR -219 292 147 3308 153 52 48 chr2 10408409 10408534 -242848049 + MER50 LTR ERV1 1 124 -610 2221 117 16 0 chr2 10408534 10408841 -242847742 + AluSx SINE Alu 1 312 0 3308 153 52 48 chr2 10408841 10409445 -242847138 + MER50 LTR ERV1 124 733 -1 264 77 0 0 chr2 10409511 10409550 -242847033 + (TC)n Simple_repeat Simple_repeat 1 39 0 673 170 67 0 chr2 10409757 10409892 -242846691 - MLT1C LTR MaLR 0 467 324 2281 98 10 3 chr2 10410871 10411168 -242845415 + AluSq SINE Alu 1 299 -14 1174 253 10 3 chr2 10411168 10411472 -242845111 + L1MB4 LINE L1 5598 5903 -277 1236 187 67 0 chr2 10411825 10412093 -242844490 + L1MB3 LINE L1 5856 6141 -42 2573 75 3 0 chr2 10412095 10412401 -242844182 + AluSp SINE Alu 1 307 -6 1177 237 48 0 chr2 10413498 10413810 -242842773 - L1MC3 LINE L1 0 7785 7459 180 282 0 0 chr2 10413811 10413850 -242842733 + L2 LINE L2 3139 3177 -95 684 258 32 53 chr2 10414217 10414500 -242842083 + MLT1C LTR MaLR 189 465 -2 468 270 88 7 chr2 10414511 10414659 -242841924 - L2 LINE L2 0 3313 3154 2200 128 0 0 chr2 10414667 10414971 -242841612 + AluSx SINE Alu 3 306 -6 236 222 32 63 chr2 10415739 10415802 -242840781 - L2 LINE L2 0 3272 3212 245 262 68 0 chr2 10416519 10416622 -242839961 - MIR SINE MIR -131 131 22 335 207 25 74 chr2 10417346 10417467 -242839116 - MIR SINE MIR -56 206 92 542 164 199 0 chr2 10417915 10418061 -242838522 + MER5A DNA MER1_type 1 175 -14 271 288 75 7 chr2 10418063 10418209 -242838374 + L2 LINE L2 2953 3108 -205 2314 109 3 7 chr2 10420096 10420400 -242836183 - AluSq SINE Alu -10 303 1 298 268 101 57 chr2 10420722 10420950 -242835633 - MER112 DNA MER1_type -6 254 17 1052 75 0 0 chr2 10420958 10421092 -242835491 + AluSg/x SINE Alu 174 307 -3 2342 105 7 7 chr2 10421096 10421402 -242835181 + AluSc SINE Alu 2 307 -2 2270 121 3 6 chr2 10421463 10421776 -242834807 + AluSx SINE Alu 1 312 0 493 244 71 56 chr2 10421941 10422138 -242834445 + L2 LINE L2 1381 1580 -1734 367 207 79 43 chr2 10422178 10422318 -242834265 + MER53 DNA DNA 3 147 -42 1251 199 106 23 chr2 10422336 10422741 -242833842 + MLT1F LTR MaLR 89 542 0 701 264 147 15 chr2 10422751 10423077 -242833506 + L2 LINE L2 1590 1958 -1356 404 256 8 60 chr2 10423078 10423195 -242833388 - L2 LINE L2 -2 3311 3201 364 261 93 25 chr2 10423249 10423410 -242833173 + L1MC5 LINE L1 7730 7901 -60 588 292 51 4 chr2 10423510 10423779 -242832804 - L2 LINE L2 -298 3015 2726 1178 236 8 4 chr2 10423806 10424065 -242832518 + AluJo SINE Alu 21 280 -32 389 317 38 43 chr2 10424105 10424291 -242832292 + L2 LINE L2 2344 2528 -786 2521 100 0 0 chr2 10424799 10425110 -242831473 + AluSx SINE Alu 1 311 -1 620 274 54 0 chr2 10425124 10425292 -242831291 + L1PB4 LINE L1 5966 6142 -14 394 222 48 84 chr2 10425364 10425531 -242831052 + L1MC4a LINE L1 5764 5924 -1884 1738 92 0 0 chr2 10425674 10425891 -242830692 - AluY SINE Alu 0 311 95 569 41 0 0 chr2 10425891 10425964 -242830619 + AluY SINE Alu 27 99 -212 361 298 101 24 chr2 10426773 10426981 -242829602 - MIR SINE MIR -31 231 8 298 276 14 48 chr2 10427628 10427773 -242828810 + GA-rich Low_complexity Low_complexity 4 143 0 583 183 58 8 chr2 10428020 10428140 -242828443 - FLAM_A SINE Alu -8 134 9 1004 182 43 34 chr2 10428337 10428510 -242828073 - MER46A DNA MER2_type -2495 236 59 1802 152 139 16 chr2 10428510 10428891 -242827692 + MSTA LTR MaLR 1 428 0 1004 182 43 34 chr2 10428891 10428926 -242827657 - MER46A DNA MER2_type -2672 59 26 2412 89 0 0 chr2 10430622 10430915 -242825668 - AluSc SINE Alu -16 293 1 187 412 11 35 chr2 10431145 10431429 -242825154 + L2 LINE L2 2460 2736 -578 209 319 34 50 chr2 10431478 10431597 -242824986 + L2 LINE L2 3073 3189 -83 2387 98 0 0 chr2 10431789 10432086 -242824497 + AluY SINE Alu 1 297 -14 3939 173 40 12 chr2 10433479 10434301 -242822282 + L1MB7 LINE L1 5321 6165 -19 281 281 99 23 chr2 10436697 10436868 -242819715 - MIR SINE MIR -46 216 33 531 43 0 0 chr2 10437137 10437207 -242819376 + MER41A LTR ERV1 397 466 -88 252 250 31 0 chr2 10437763 10437827 -242818756 + C-rich Low_complexity Low_complexity 4 69 0 22 0 0 0 chr2 10438396 10438418 -242818165 + AT_rich Low_complexity Low_complexity 1 22 0 330 321 132 5 chr2 10438569 10438759 -242817824 + L1MB8 LINE L1 5448 5661 -2147 1679 153 29 4 chr2 10438968 10439249 -242817334 + AluJo SINE Alu 1 288 -24 248 261 87 33 chr2 10439713 10439805 -242816778 + L2 LINE L2 3158 3254 -18 204 381 137 6 chr2 10440757 10441072 -242815511 + L2 LINE L2 2127 2482 -832 290 329 0 12 chr2 10442558 10442643 -242813940 - L2 LINE L2 -9 3304 3221 2548 181 34 27 chr2 10442747 10443044 -242813539 + L1MB8 LINE L1 5522 5816 -362 1861 140 49 6 chr2 10443044 10443372 -242813211 + MER2 DNA MER2_type 2 343 -1 2548 181 34 27 chr2 10443372 10443694 -242812889 + L1MB8 LINE L1 5816 6145 -33 227 224 0 0 chr2 10443697 10443746 -242812837 + L1MB8 LINE L1 6097 6145 -33 226 224 0 0 chr2 10443749 10443798 -242812785 + L1MB8 LINE L1 6097 6145 -33 378 209 0 0 chr2 10443801 10443887 -242812696 + L1MB7 LINE L1 6099 6184 0 381 152 30 0 chr2 10443938 10444004 -242812579 + Tigger2 DNA MER2_type 2 69 -2649 * 1731 146 56 11 chr2 10443990 10444346 -242812237 + Tigger2 DNA MER2_type 2270 2641 -77 1137 120 0 0 chr2 10444483 10444700 -242811883 + (TA)n Simple_repeat Simple_repeat 1 217 0 2299 88 0 7 chr2 10444700 10444994 -242811589 - AluSc SINE Alu -17 292 1 352 203 0 0 chr2 10444997 10445061 -242811522 + Tigger2 DNA MER2_type 2654 2717 -1 181 325 62 12 chr2 10445142 10445222 -242811361 - L2 LINE L2 -14 3258 3175 985 121 143 27 chr2 10445631 10445855 -242810728 - L1MB3 LINE L1 0 6183 5934 1733 131 39 18 chr2 10447540 10447822 -242808761 - AluJo SINE Alu -15 297 10 216 218 0 0 chr2 10449013 10449104 -242807479 + GA-rich Low_complexity Low_complexity 1 91 0 1768 149 21 4 chr2 10449147 10449461 -242807122 + AluJb SINE Alu 1 312 0 181 340 65 75 chr2 10449528 10449807 -242806776 - L2 LINE L2 -674 2640 2365 22 56 0 0 chr2 10450066 10450102 -242806481 + AT_rich Low_complexity Low_complexity 1 36 0 2382 75 3 7 chr2 10450553 10450861 -242805722 - AluSg SINE Alu -3 307 1 557 255 57 0 chr2 10450913 10451070 -242805513 + HAL1 LINE L1 1 166 -2341 312 267 181 36 chr2 10451263 10451484 -242805099 + HAL1 LINE L1 599 851 -1656 497 249 90 37 chr2 10451606 10451795 -242804788 - HAL1 LINE L1 -761 1746 1548 844 276 117 8 chr2 10451811 10452132 -242804451 + HAL1 LINE L1 1771 2142 -365 1643 164 31 31 chr2 10452132 10452425 -242804158 + AluJo SINE Alu 1 293 -19 844 276 117 8 chr2 10452425 10452487 -242804096 + HAL1 LINE L1 2142 2196 -311 230 133 0 22 chr2 10452545 10452590 -242803993 + (GA)n Simple_repeat Simple_repeat 2 45 0 348 280 43 0 chr2 10452590 10452683 -242803900 + HAL1 LINE L1 2334 2430 -77 1574 131 85 4 chr2 10452740 10452999 -242803584 - AluJb SINE Alu -10 302 23 2078 122 0 0 chr2 10453007 10453315 -242803268 - AluSx SINE Alu 0 321 14 24 85 0 0 chr2 10453385 10453444 -242803139 + AT_rich Low_complexity Low_complexity 1 59 0 3339 111 40 32 chr2 10453613 10454136 -242802447 - MER1A DNA MER1_type 0 527 1 199 279 29 15 chr2 10454318 10454386 -242802197 + L2 LINE L2 3245 3313 0 881 162 6 30 chr2 10454397 10454564 -242802019 - FRAM SINE Alu -18 158 1 2711 226 85 31 chr2 10455497 10456449 -242800134 + Tigger6a DNA MER2_type 58 1060 -23 279 324 29 10 chr2 10457213 10457315 -242799268 - MIR3 SINE MIR -54 154 51 280 225 90 9 chr2 10457835 10457946 -242798637 + L1ME4a LINE L1 5735 5854 -267 255 297 74 20 chr2 10458027 10458175 -242798408 + L1ME4a LINE L1 5966 6121 0 2327 92 0 3 chr2 10458481 10458787 -242797796 - AluY SINE Alu -6 305 1 1722 162 18 7 chr2 10458961 10459239 -242797344 + AluJb SINE Alu 7 287 -25 323 192 322 19 chr2 10459388 10459774 -242796809 + LTR50 LTR ERVL 136 736 -59 2028 125 40 15 chr2 10461358 10461687 -242794896 - MER1B DNA MER1_type 0 337 1 678 159 46 26 chr2 10462258 10462409 -242794174 - MER103 DNA DNA -1 165 12 708 295 14 5 chr2 10462433 10462643 -242793940 - MIR SINE MIR -45 217 6 639 213 104 97 chr2 10463555 10463766 -242792817 + MIR SINE MIR 3 216 -46 1788 154 59 0 chr2 10463766 10464052 -242792531 + AluSx SINE Alu 1 303 -9 639 213 104 97 chr2 10464052 10464100 -242792483 + MIR SINE MIR 216 262 0 234 0 0 0 chr2 10465174 10465200 -242791383 + (TTA)n Simple_repeat Simple_repeat 2 27 0 475 200 0 0 chr2 10465200 10465280 -242791303 - FLAM SINE Alu -22 121 42 1110 151 5 15 chr2 10465399 10465605 -242790978 + L1MA8 LINE L1 6083 6286 -5 2227 75 0 42 chr2 10466729 10467036 -242789547 + AluY SINE Alu 1 294 -17 490 210 51 80 chr2 10467238 10467376 -242789207 + L2 LINE L2 3176 3309 -4 488 200 183 8 chr2 10468395 10468515 -242788068 - FLAM_A SINE Alu -1 141 1 1692 149 12 81 chr2 10468925 10469057 -242787526 + AluJo SINE Alu 1 140 -172 2207 114 3 22 chr2 10469057 10469374 -242787209 + AluSx SINE Alu 1 311 -1 1692 149 12 81 chr2 10469374 10469576 -242787007 + AluJo SINE Alu 140 312 0 2023 113 0 4 chr2 10469932 10470206 -242786377 - AluSx SINE Alu -18 294 22 893 162 125 97 chr2 10470232 10470448 -242786135 + AluJo SINE Alu 84 305 -7 210 150 0 0 chr2 10471296 10471336 -242785247 + (TAA)n Simple_repeat Simple_repeat 2 41 0 2228 115 0 0 chr2 10471388 10471683 -242784900 - AluSx SINE Alu -17 295 1 432 155 28 0 chr2 10471745 10471816 -242784767 - AluJ/FRAM SINE Alu -20 292 220 609 258 48 70 chr2 10471827 10472157 -242784426 - MER46C DNA MER2_type -11 327 5 491 281 203 91 chr2 10472993 10473641 -242782942 + HAL1 LINE L1 57 631 -1876 2323 89 30 0 chr2 10473641 10473943 -242782640 - AluSx SINE Alu -1 311 1 491 281 203 91 chr2 10473943 10473973 -242782610 + HAL1 LINE L1 631 656 -1851 2050 154 0 0 chr2 10473973 10474272 -242782311 - AluJb SINE Alu -13 299 1 491 281 203 91 chr2 10474272 10474306 -242782277 + HAL1 LINE L1 656 850 -1657 380 279 236 54 chr2 10474344 10474734 -242781849 - L2 LINE L2 0 3313 2853 1084 210 82 14 chr2 10474758 10475049 -242781534 + L1M4 LINE L1 799 1109 -5433 1166 206 112 17 chr2 10475122 10475463 -242781120 + L1MB7 LINE L1 5725 6117 -67 874 140 0 22 chr2 10475463 10475599 -242780984 - FLAM_A SINE Alu 0 133 1 1166 206 112 17 chr2 10475599 10475674 -242780909 + L1MB7 LINE L1 6117 6184 0 250 257 53 82 chr2 10475690 10475896 -242780687 - L1MC4 LINE L1 -404 7638 7439 234 81 0 0 chr2 10476552 10476589 -242779994 + (TATG)n Simple_repeat Simple_repeat 1 37 0 1766 132 17 38 chr2 10476589 10476876 -242779707 - AluJo SINE Alu -31 281 1 1794 172 10 3 chr2 10478214 10478517 -242778066 - AluSx SINE Alu -7 305 1 1888 178 0 0 chr2 10478739 10479037 -242777546 + AluJo SINE Alu 5 302 -10 937 173 32 5 chr2 10479338 10479523 -242777060 - MER3 DNA MER1_type 0 209 20 230 261 0 0 chr2 10479605 10479670 -242776913 + L1ME4a LINE L1 5755 5819 -1989 213 393 87 0 chr2 10480515 10480698 -242775885 + L2 LINE L2 2645 2843 -471 205 353 147 46 chr2 10480800 10481106 -242775477 + L2 LINE L2 2933 3269 -3 753 132 0 35 chr2 10481241 10481385 -242775198 + L1MC/D LINE L1 5420 5558 -2437 * 754 206 36 10 chr2 10481384 10481578 -242775005 - HAL1 LINE L1 -651 1856 1658 1131 31 0 0 chr2 10481597 10481725 -242774858 - SVA Other Other 0 1386 1259 357 138 0 0 chr2 10481726 10481784 -242774799 + Alu SINE Alu 236 293 -9 494 300 84 58 chr2 10481785 10482095 -242774488 + HAL1 LINE L1 1855 2172 -335 3936 173 32 5 chr2 10482098 10482856 -242773727 + L1MC1 LINE L1 5544 6321 -12 1849 153 10 32 chr2 10483315 10483629 -242772954 + AluJo SINE Alu 1 307 -5 401 277 10 10 chr2 10483679 10483780 -242772803 - L2 LINE L2 -25 3288 3188 2247 75 0 7 chr2 10484832 10485152 -242771431 + AluY SINE Alu 16 311 0 828 136 40 40 chr2 10485164 10485340 -242771243 + L1PA16 LINE L1 5991 6166 0 21 0 0 0 chr2 10485340 10485361 -242771222 + AT_rich Low_complexity Low_complexity 1 21 0 856 201 69 0 chr2 10486216 10486405 -242770178 - MER105 DNA DNA 0 204 3 22 0 0 0 chr2 10486790 10486812 -242769771 + AT_rich Low_complexity Low_complexity 1 22 0 280 261 134 8 chr2 10486891 10487025 -242769558 + L1ME4a LINE L1 5969 6119 -2 992 202 5 11 chr2 10487324 10487512 -242769071 - AluJo SINE Alu -125 187 1 409 322 35 14 chr2 10487641 10487784 -242768799 - MIR SINE MIR -111 151 6 459 289 72 0 chr2 10487785 10487854 -242768729 + MIR3 SINE MIR 34 97 -111 2328 98 0 10 chr2 10487854 10488161 -242768422 + AluY SINE Alu 1 304 -7 459 289 72 0 chr2 10488161 10488243 -242768340 + MIR3 SINE MIR 97 196 -12 2088 80 8 0 chr2 10489141 10489404 -242767179 - AluSp SINE Alu -15 298 34 473 261 33 20 chr2 10489568 10489721 -242766862 - L2 LINE L2 0 3313 3159 881 176 14 0 chr2 10489726 10489874 -242766709 - MER58A DNA MER1_type -36 188 39 820 189 47 115 chr2 10489895 10490233 -242766350 + LTR37A LTR ERV1 40 354 -72 37 0 0 0 chr2 10490236 10490273 -242766310 + AT_rich Low_complexity Low_complexity 1 37 0 801 160 0 8 chr2 10490273 10490392 -242766191 - FLAM_C SINE Alu -15 118 1 318 244 0 0 chr2 10490392 10490474 -242766109 + LTR37A LTR ERV1 345 426 0 570 192 106 0 chr2 10490667 10490771 -242765812 - FLAM_A SINE Alu -20 122 8 32 86 0 0 chr2 10490813 10490894 -242765689 + AT_rich Low_complexity Low_complexity 1 81 0 344 250 0 0 chr2 10491137 10491201 -242765382 - L2 LINE L2 -548 2766 2703 204 40 0 0 chr2 10491213 10491238 -242765345 + (TG)n Simple_repeat Simple_repeat 2 26 0 27 39 0 19 chr2 10491238 10491262 -242765321 + AT_rich Low_complexity Low_complexity 1 24 -27 1879 159 0 10 chr2 10491262 10491551 -242765032 - AluJo SINE Alu -26 286 1 27 39 0 19 chr2 10491551 10491578 -242765005 + AT_rich Low_complexity Low_complexity 24 51 0 1348 268 101 87 chr2 10491579 10492323 -242764260 - L2 LINE L2 -619 2695 1942 1647 152 77 46 chr2 10492393 10492742 -242763841 - MER46B DNA MER2_type 0 236 2 222 283 9 142 chr2 10493089 10493195 -242763388 + L2 LINE L2 3144 3235 -37 1793 147 24 10 chr2 10493318 10493611 -242762972 - AluSx SINE Alu -15 297 1 1666 144 0 118 chr2 10493711 10494050 -242762533 + AluJo SINE Alu 1 299 -3 1931 153 44 0 chr2 10494343 10494637 -242761946 + AluSx SINE Alu 1 307 -5 1740 164 3 14 chr2 10495423 10495709 -242760874 + AluJo SINE Alu 1 283 -29 495 87 0 0 chr2 10495717 10495786 -242760797 + (CGTAA)n Simple_repeat Simple_repeat 3 71 0 2302 100 0 10 chr2 10495907 10496216 -242760367 - AluSg SINE Alu -4 306 1 2269 126 0 0 chr2 10496216 10496526 -242760057 - AluSx SINE Alu -2 310 1 2281 79 0 0 chr2 10496564 10496844 -242759739 + AluY SINE Alu 1 280 -31 207 0 0 0 chr2 10497264 10497287 -242759296 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 987 89 8 0 chr2 10498339 10498462 -242758121 + AluSq/x SINE Alu 14 137 -175 2119 87 15 84 chr2 10498462 10498794 -242757789 + AluSq SINE Alu 1 309 -4 245 324 65 0 chr2 10499037 10499145 -242757438 + L2 LINE L2 2383 2497 -817 234 330 175 19 chr2 10499782 10499988 -242756595 + L2 LINE L2 2593 2830 -484 1911 142 13 7 chr2 10501391 10501693 -242754890 + AluSx SINE Alu 1 304 -8 314 299 110 13 chr2 10502496 10502650 -242753933 - MIR SINE MIR -47 215 47 2331 74 14 3 chr2 10502956 10503252 -242753331 - AluY SINE Alu -12 299 1 339 25 0 0 chr2 10503352 10503392 -242753191 + (CA)n Simple_repeat Simple_repeat 2 41 0 603 171 314 44 chr2 10504753 10505005 -242751578 + MER5C DNA MER1_type 5 324 0 219 280 0 54 chr2 10505380 10505473 -242751110 - MER5B DNA MER1_type -76 102 15 180 292 21 62 chr2 10505387 10505483 -242751100 + MER5A DNA MER1_type 94 185 -4 * 487 261 32 37 chr2 10506184 10506372 -242750211 + L1MC4 LINE L1 7492 7678 -364 263 345 12 30 chr2 10506567 10506735 -242749848 + L1MC4 LINE L1 7860 8024 -18 2389 97 3 0 chr2 10506735 10507043 -242749540 - AluSx SINE Alu -3 309 1 1491 201 18 41 chr2 10507109 10507452 -242749131 - MER58B DNA MER1_type 0 341 7 1466 169 27 37 chr2 10507593 10507889 -242748694 - AluJo SINE Alu -19 293 1 924 182 25 0 chr2 10508036 10508195 -242748388 + FRAM SINE Alu 1 162 -14 1203 170 166 0 chr2 10508773 10509050 -242747533 - MER33 DNA MER1_type 0 324 2 2513 68 0 0 chr2 10509383 10509691 -242746892 + AluSg SINE Alu 1 308 -2 279 320 0 40 chr2 10509696 10509796 -242746787 + MIR SINE MIR 20 115 -147 204 158 0 0 chr2 10509810 10509848 -242746735 + A-rich Low_complexity Low_complexity 1 38 0 2194 118 3 0 chr2 10510337 10510634 -242745949 + AluSx SINE Alu 1 298 -14 190 394 20 10 chr2 10510635 10510734 -242745849 - MER5A DNA MER1_type -54 135 36 283 192 39 0 chr2 10512153 10512205 -242744378 - MIR SINE MIR -63 145 92 1950 140 13 3 chr2 10512351 10512658 -242743925 + AluSx SINE Alu 1 310 -2 342 88 99 11 chr2 10512658 10512749 -242743834 + GA-rich Low_complexity Low_complexity 2 100 0 2057 117 14 0 chr2 10514460 10514750 -242741833 + AluSx SINE Alu 1 294 -18 251 185 56 0 chr2 10515586 10515640 -242740943 - L2 LINE L2 -1 3312 3256 * 323 304 20 10 chr2 10515637 10515739 -242740844 - L2 LINE L2 -3172 142 40 277 289 109 45 chr2 10516007 10516163 -242740420 + MER103 DNA DNA 1 166 0 1047 148 0 6 chr2 10516219 10516381 -242740202 + AluJo SINE Alu 1 161 -151 1601 162 3 56 chr2 10516818 10517121 -242739462 + AluJb SINE Alu 1 287 -25 2033 123 3 7 chr2 10517749 10518041 -242738542 - AluSx SINE Alu -21 291 1 202 270 0 0 chr2 10518334 10518408 -242738175 + A-rich Low_complexity Low_complexity 1 74 0 2297 106 3 0 chr2 10518497 10518798 -242737785 - AluSp SINE Alu -11 302 1 2175 116 3 0 chr2 10518800 10519094 -242737489 - AluSx SINE Alu -17 295 1 28 0 0 0 chr2 10519288 10519316 -242737267 + AT_rich Low_complexity Low_complexity 1 28 0 522 220 61 8 chr2 10519562 10519694 -242736889 + MIR SINE MIR 124 262 0 430 245 19 0 chr2 10519836 10519942 -242736641 + L1ME4a LINE L1 5562 5669 -452 2205 118 3 3 chr2 10520508 10520805 -242735778 + AluSx SINE Alu 1 297 -15 404 247 0 0 chr2 10520866 10520959 -242735624 + L1MC4 LINE L1 7805 7897 -145 2442 56 3 7 chr2 10521092 10521396 -242735187 + AluY SINE Alu 1 303 -8 1018 130 18 18 chr2 10521396 10521565 -242735018 + AluSg/x SINE Alu 132 300 -10 1927 92 78 0 chr2 10521572 10521843 -242734740 + AluSq SINE Alu 1 292 -21 1422 184 25 0 chr2 10521980 10522258 -242734325 - AluJo SINE Alu -27 285 1 185 267 0 67 chr2 10522941 10523016 -242733567 + L2 LINE L2 825 894 -2420 2363 137 9 0 chr2 10523313 10523663 -242732920 - L1PA16 LINE L1 -10 6156 5804 250 147 120 13 chr2 10523696 10523771 -242732812 + L1ME4a LINE L1 5732 5814 -1994 1939 104 85 0 chr2 10523777 10524047 -242732536 - AluSx SINE Alu -19 293 1 438 246 77 8 chr2 10525096 10525226 -242731357 + MIR SINE MIR 112 250 -12 23 0 0 0 chr2 10525250 10525273 -242731310 + AT_rich Low_complexity Low_complexity 1 23 0 618 250 85 0 chr2 10525410 10525574 -242731009 + MIR SINE MIR 57 234 -28 30 0 0 0 chr2 10526201 10526231 -242730352 + AT_rich Low_complexity Low_complexity 1 30 0 442 192 178 14 chr2 10526409 10526503 -242730080 + L1ME4a LINE L1 5930 6007 -114 1323 171 65 52 chr2 10526503 10526812 -242729771 - AluSq SINE Alu 0 313 1 442 192 178 14 chr2 10526812 10526863 -242729720 + L1ME4a LINE L1 6007 6099 -22 188 100 25 0 chr2 10526865 10526905 -242729678 + (TA)n Simple_repeat Simple_repeat 1 41 0 468 77 0 0 chr2 10526905 10526970 -242729613 + (CA)n Simple_repeat Simple_repeat 2 66 0 2229 85 0 4 chr2 10527034 10527353 -242729230 + AluSc SINE Alu 1 318 0 867 176 0 0 chr2 10527354 10527479 -242729104 + FLAM_C SINE Alu 1 125 -8 220 51 26 26 chr2 10527859 10527876 -242728707 + (CAAAA)n Simple_repeat Simple_repeat 2 18 -22 2205 118 0 6 chr2 10527876 10528190 -242728393 + AluSx SINE Alu 1 312 0 220 51 26 26 chr2 10528190 10528211 -242728372 + (CAAAA)n Simple_repeat Simple_repeat 17 40 0 201 74 0 0 chr2 10528823 10528850 -242727733 + (T)n Simple_repeat Simple_repeat 1 27 0 2258 99 3 3 chr2 10529469 10529772 -242726811 + AluSp SINE Alu 1 303 -10 1869 164 0 3 chr2 10530134 10530427 -242726156 + AluSx SINE Alu 1 292 -20 1111 179 0 0 chr2 10531487 10531666 -242724917 + AluJb SINE Alu 129 307 -5 1238 192 157 121 chr2 10531813 10531981 -242724602 + MLT1E2 LTR MaLR 10 170 -456 2150 109 3 0 chr2 10531981 10532287 -242724296 + AluSg SINE Alu 1 307 0 1238 192 157 121 chr2 10532287 10532345 -242724238 + MLT1E2 LTR MaLR 170 224 -402 1707 172 19 25 chr2 10532345 10532659 -242723924 + AluJo SINE Alu 1 312 0 1238 192 157 121 chr2 10532659 10532854 -242723729 + MLT1E2 LTR MaLR 224 436 -190 610 229 114 42 chr2 10532904 10533133 -242723450 + MLT1E2 LTR MaLR 287 623 -3 641 271 127 43 chr2 10533440 10533971 -242722612 + L1MC4a LINE L1 5303 5817 -304 2325 112 0 0 chr2 10534056 10534361 -242722222 - AluSx SINE Alu -7 305 1 2130 130 0 0 chr2 10534363 10534662 -242721921 - AluSx SINE Alu -13 299 1 1985 147 0 7 chr2 10534890 10535196 -242721387 - AluJb SINE Alu -8 304 1 279 0 0 0 chr2 10535263 10535294 -242721289 + (TG)n Simple_repeat Simple_repeat 2 32 0 271 323 96 55 chr2 10536532 10536752 -242719831 + MIR SINE MIR 22 250 -12 1020 195 59 0 chr2 10536756 10536977 -242719606 + MSTB LTR MaLR 1 234 -192 450 140 110 10 chr2 10537194 10537294 -242719289 - MER5A DNA MER1_type -79 110 1 344 247 45 0 chr2 10537741 10537830 -242718753 + MIR SINE MIR 92 184 -78 262 294 71 41 chr2 10539009 10539179 -242717404 + L2 LINE L2 2997 3171 -101 261 98 0 0 chr2 10539233 10539274 -242717309 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 608 246 24 12 chr2 10539345 10539512 -242717071 - MER20 DNA MER1_type -15 204 36 27 29 0 0 chr2 10539898 10539932 -242716651 + AT_rich Low_complexity Low_complexity 1 34 0 401 238 0 10 chr2 10539960 10540061 -242716522 - FLAM_C SINE Alu -7 126 27 1945 108 17 21 chr2 10540236 10540524 -242716059 - AluSg SINE Alu -23 287 1 1075 84 7 14 chr2 10540524 10540666 -242715917 - AluSq/x SINE Alu -172 141 1 654 139 18 96 chr2 10540669 10540796 -242715787 + L1MB3 LINE L1 6029 6164 -19 359 21 21 0 chr2 10540796 10540844 -242715739 + (TG)n Simple_repeat Simple_repeat 2 50 0 2223 101 10 7 chr2 10540848 10541145 -242715438 - AluSx SINE Alu -14 298 1 654 139 18 96 chr2 10541145 10541178 -242715405 + L1MB3 LINE L1 6167 6181 -2 653 237 40 48 chr2 10541277 10541526 -242715057 - MLT1H1 LTR MaLR 0 555 309 423 316 95 13 chr2 10541555 10541792 -242714791 - MLT1H1 LTR MaLR -319 276 26 1738 126 13 32 chr2 10541817 10542126 -242714457 - AluY SINE Alu -8 303 1 564 144 14 50 chr2 10542581 10542720 -242713863 + AluJb SINE Alu 162 295 -17 375 209 6 122 chr2 10542767 10542939 -242713644 + Charlie7 DNA MER1_type 317 468 -2144 1978 250 67 46 chr2 10542956 10543672 -242712911 + MER21B LTR ERV1 22 752 -111 367 284 79 64 chr2 10543709 10544037 -242712546 + Charlie7 DNA MER1_type 527 859 -1753 247 132 23 120 chr2 10544594 10544721 -242711862 - FLAM SINE Alu -25 108 44 233 222 0 0 chr2 10545190 10545235 -242711348 - MIR3 SINE MIR -52 156 112 2017 127 28 3 chr2 10545524 10545815 -242710768 + AluSx SINE Alu 1 298 -14 2454 80 3 10 chr2 10545820 10546131 -242710452 + AluSq SINE Alu 5 313 0 1880 120 6 70 chr2 10546678 10546994 -242709589 - AluJb SINE Alu -16 296 1 2480 50 6 44 chr2 10547283 10547603 -242708980 + AluY SINE Alu 1 308 -3 2187 112 7 0 chr2 10547614 10547908 -242708675 + AluY SINE Alu 1 296 -15 1547 254 81 5 chr2 10547963 10548384 -242708199 + MLT1J LTR MaLR 1 453 -58 205 239 28 113 chr2 10548460 10548602 -242707981 - MIR SINE MIR -11 251 122 334 268 52 0 chr2 10549253 10549350 -242707233 + L3 LINE CR1 1377 1478 -99 593 269 88 0 chr2 10550219 10550390 -242706193 + MIR SINE MIR 77 262 0 315 243 72 36 chr2 10553398 10553509 -242703074 + MIR SINE MIR 65 179 -83 2110 112 14 0 chr2 10553735 10554030 -242702553 + AluSg SINE Alu 1 299 -11 2350 98 0 7 chr2 10554652 10554958 -242701625 + AluSq SINE Alu 1 304 -9 841 169 0 8 chr2 10555369 10555499 -242701084 + FLAM_C SINE Alu 1 129 -14 262 67 44 0 chr2 10555605 10555650 -242700933 + GA-rich Low_complexity Low_complexity 1 47 0 470 149 44 70 chr2 10555652 10555685 -242700898 + MER3 DNA MER1_type 98 130 -79 1021 175 171 52 chr2 10555685 10555820 -242700763 - AluJo SINE Alu 0 302 184 2396 100 3 0 chr2 10555820 10556120 -242700463 - AluSp SINE Alu -12 301 1 1021 175 171 52 chr2 10556120 10556253 -242700330 - AluJo SINE Alu -118 184 2 470 149 44 70 chr2 10556253 10556333 -242700250 + MER3 DNA MER1_type 130 208 -1 251 229 0 0 chr2 10556293 10556341 -242700242 - MER3 DNA MER1_type -121 88 41 * 1820 165 7 11 chr2 10556853 10557138 -242699445 + AluJo SINE Alu 8 291 -21 180 0 0 0 chr2 10557216 10557236 -242699347 + (TG)n Simple_repeat Simple_repeat 1 20 0 1276 148 0 5 chr2 10557403 10557599 -242698984 - AluJb SINE Alu -1 311 117 285 127 0 0 chr2 10557611 10557666 -242698917 - Alu SINE Alu -1 301 247 1795 123 0 4 chr2 10557673 10557925 -242698658 + AluSx SINE Alu 62 312 0 787 193 7 7 chr2 10558676 10558821 -242697762 + MER45A DNA AcHobo 34 178 0 352 383 61 7 chr2 10559013 10559290 -242697293 - L2 LINE L2 -572 2742 2451 1425 238 35 33 chr2 10559401 10559581 -242697002 + L1M4 LINE L1 4521 4699 -1447 2408 93 0 3 chr2 10559581 10559892 -242696691 + AluSx SINE Alu 1 310 -2 1425 238 35 33 chr2 10559892 10560194 -242696389 + L1M4 LINE L1 4699 5004 -1142 1235 153 5 63 chr2 10560194 10560416 -242696167 + AluSx SINE Alu 1 209 -103 25 31 0 0 chr2 10560616 10560648 -242695935 + AT_rich Low_complexity Low_complexity 1 32 0 775 152 0 15 chr2 10560648 10560780 -242695803 - FLAM_C SINE Alu -3 130 1 230 30 0 0 chr2 10560780 10560813 -242695770 + L1PA12 LINE L1 6134 6166 -2 1532 184 3 63 chr2 10560815 10561149 -242695434 + AluJo SINE Alu 1 312 0 944 178 0 30 chr2 10561312 10561481 -242695102 + AluJb SINE Alu 124 287 -25 1869 167 17 3 chr2 10561492 10561791 -242694792 + AluJb SINE Alu 1 303 -9 637 206 84 0 chr2 10561808 10561966 -242694617 - MER3 DNA MER1_type -51 158 1 524 263 159 6 chr2 10562008 10562335 -242694248 - L2 LINE L2 -2795 519 143 318 145 0 105 chr2 10562453 10562470 -242694113 - L1MC4 LINE L1 0 8042 8025 2148 151 0 3 chr2 10562470 10562782 -242693801 - AluJb SINE Alu -1 311 1 318 145 0 105 chr2 10562782 10562840 -242693743 - L1MC4 LINE L1 -17 8025 7975 1023 250 12 19 chr2 10563009 10563166 -242693417 - L1MC4a LINE L1 -1042 6766 6610 186 43 0 0 chr2 10563166 10563189 -242693394 + (TC)n Simple_repeat Simple_repeat 2 24 0 1023 250 12 19 chr2 10563189 10563287 -242693296 - L1MC4a LINE L1 -1198 6610 6513 1627 184 7 7 chr2 10563295 10563573 -242693010 - AluJo SINE Alu -12 300 23 2097 119 10 26 chr2 10563583 10563894 -242692689 - AluSq SINE Alu -7 306 1 2024 146 13 0 chr2 10563995 10564296 -242692287 - AluJb SINE Alu -7 305 1 1924 155 14 0 chr2 10564739 10565030 -242691553 + AluJb SINE Alu 1 295 -17 2425 84 3 3 chr2 10565035 10565334 -242691249 + AluSp SINE Alu 1 299 -14 2141 143 0 0 chr2 10565572 10565865 -242690718 + AluSx SINE Alu 1 293 -19 1769 161 7 4 chr2 10566134 10566414 -242690169 - AluJb SINE Alu -31 281 1 368 289 48 54 chr2 10566414 10566580 -242690003 + L1ME4a LINE L1 5912 6076 -45 1570 124 5 0 chr2 10566581 10566791 -242689792 + AluSx SINE Alu 58 268 -44 2501 78 7 0 chr2 10566902 10567208 -242689375 + AluSc SINE Alu 1 308 -1 258 321 74 26 chr2 10568725 10568915 -242687668 - MIR3 SINE MIR -7 201 3 1241 179 0 5 chr2 10569099 10569311 -242687272 + AluJb SINE Alu 87 297 -15 405 164 37 60 chr2 10569314 10569391 -242687192 + Charlie5 DNA MER1_type 2455 2529 -56 2145 119 0 10 chr2 10569391 10569684 -242686899 - AluSx SINE Alu -22 290 1 405 164 37 60 chr2 10569684 10569740 -242686843 + Charlie5 DNA MER1_type 2529 2585 0 1668 139 56 40 chr2 10569797 10570100 -242686483 - AluJo SINE Alu -4 308 1 482 208 10 0 chr2 10570124 10570220 -242686363 - MER5A DNA MER1_type -80 109 13 931 213 11 0 chr2 10570250 10570433 -242686150 - MER5A DNA MER1_type -4 185 1 757 272 117 29 chr2 10570695 10571037 -242685546 - L1M4 LINE L1 -2882 3264 2893 1330 171 0 9 chr2 10571040 10571251 -242685332 - AluJo SINE Alu -94 218 10 208 130 0 65 chr2 10571281 10571327 -242685256 + (TTTTTG)n Simple_repeat Simple_repeat 5 47 0 543 100 12 0 chr2 10571345 10571425 -242685158 + AluJ/FLAM SINE Alu 2 82 -230 1057 138 66 0 chr2 10571532 10571713 -242684870 + AluY SINE Alu 119 311 0 355 333 53 15 chr2 10571727 10571859 -242684724 - L1M4 LINE L1 -3372 2774 2638 2055 130 10 13 chr2 10571954 10572255 -242684328 - AluSx SINE Alu -12 300 1 525 233 131 45 chr2 10573143 10573320 -242683263 + L2 LINE L2 2509 2715 -599 1878 74 0 4 chr2 10573320 10573573 -242683010 + AluSp SINE Alu 57 308 0 525 233 131 45 chr2 10573573 10573639 -242682944 + L2 LINE L2 2715 2774 -540 2143 105 48 7 chr2 10574082 10574377 -242682206 + AluSx SINE Alu 1 307 -5 286 273 11 11 chr2 10574382 10574470 -242682113 - L1ME LINE L1 -476 5645 5558 273 242 11 21 chr2 10574540 10574635 -242681948 - L1ME LINE L1 -2379 5429 5336 2349 97 0 3 chr2 10574951 10575251 -242681332 - AluSx SINE Alu -13 299 1 194 245 19 0 chr2 10575948 10576001 -242680582 + MIR SINE MIR 85 138 -124 447 68 0 0 chr2 10576137 10576196 -242680387 + (TTCC)n Simple_repeat Simple_repeat 1 59 0 2051 118 4 0 chr2 10576196 10576468 -242680115 - AluSx SINE Alu -33 279 7 662 181 241 0 chr2 10577387 10577520 -242679063 - AluJo SINE Alu -18 294 194 195 69 0 0 chr2 10577520 10577549 -242679034 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 662 181 241 0 chr2 10577549 10577581 -242679002 - AluJo SINE Alu -118 194 89 1981 121 0 48 chr2 10577750 10578064 -242678519 + AluSg SINE Alu 1 299 -11 2256 113 17 0 chr2 10578067 10578367 -242678216 + AluSp SINE Alu 1 305 -8 1164 124 12 0 chr2 10578371 10578540 -242678043 + FRAM SINE Alu 1 170 -6 1219 214 98 14 chr2 10578541 10578968 -242677615 + L1ME3A LINE L1 5200 5667 -503 2387 110 0 0 chr2 10578971 10579279 -242677304 + AluSg SINE Alu 1 308 -2 819 164 8 8 chr2 10579319 10579447 -242677136 + FAM SINE Alu 6 133 -52 28 0 0 0 chr2 10579451 10579479 -242677104 + AT_rich Low_complexity Low_complexity 1 28 0 2207 126 7 3 chr2 10579490 10579800 -242676783 + AluSp SINE Alu 3 313 0 734 258 132 85 chr2 10579802 10580271 -242676312 + L1ME3A LINE L1 5652 6142 -28 2283 115 0 0 chr2 10580304 10580599 -242675984 - AluSq SINE Alu -18 295 1 1530 155 73 43 chr2 10580599 10580917 -242675666 - L1MC1 LINE L1 -8 6325 5995 2079 97 0 0 chr2 10580937 10581216 -242675367 - AluSx SINE Alu 0 301 23 211 343 29 64 chr2 10581792 10581914 -242674669 + L2 LINE L2 2891 3016 -297 2306 122 0 0 chr2 10581914 10582218 -242674365 + AluSq SINE Alu 1 304 -9 211 343 29 64 chr2 10582218 10582300 -242674283 + L2 LINE L2 3016 3099 -214 593 165 55 16 chr2 10582300 10582427 -242674156 - FLAM_C SINE Alu -1 132 1 211 343 29 64 chr2 10582427 10582597 -242673986 + L2 LINE L2 3099 3253 -60 1251 176 173 4 chr2 10582994 10583249 -242673334 + AluSx SINE Alu 1 298 -14 238 322 75 4 chr2 10583403 10583630 -242672953 - L2 LINE L2 -2391 923 681 185 94 31 0 chr2 10583711 10583743 -242672840 + (TTCA)n Simple_repeat Simple_repeat 2 34 0 2361 96 3 10 chr2 10584734 10585048 -242671535 + AluSx SINE Alu 1 312 0 2306 104 0 0 chr2 10585414 10585712 -242670871 + AluSx SINE Alu 1 298 -14 348 239 159 11 chr2 10585746 10585834 -242670749 - AluSg SINE Alu -176 124 24 235 213 172 0 chr2 10585840 10585962 -242670621 - L1ME LINE L1 -270 5851 5709 541 290 67 40 chr2 10586245 10586469 -242670114 - MIR SINE MIR -20 242 13 2094 104 8 0 chr2 10586959 10587227 -242669356 + AluSx SINE Alu 22 291 -21 995 102 0 0 chr2 10587243 10587398 -242669185 + AluSg/x SINE Alu 157 311 0 379 257 95 0 chr2 10587479 10587584 -242668999 + MIR SINE MIR 32 146 -62 259 366 0 0 chr2 10588116 10588209 -242668374 - MIR SINE MIR -73 189 97 395 300 147 21 chr2 10589236 10589426 -242667157 + L1ME4a LINE L1 5880 6093 -28 2113 150 0 10 chr2 10589696 10589874 -242666709 - AluSx SINE Alu -1 311 136 2614 43 0 3 chr2 10589874 10590173 -242666410 - AluY SINE Alu -13 298 1 2113 150 0 10 chr2 10590173 10590308 -242666275 - AluSx SINE Alu -176 136 1 240 59 0 0 chr2 10590386 10590420 -242666163 + (GTTTG)n Simple_repeat Simple_repeat 5 38 0 2276 95 14 0 chr2 10590421 10590717 -242665866 - AluSp SINE Alu -12 301 2 367 285 39 31 chr2 10590918 10591048 -242665535 + MIR3 SINE MIR 15 145 -63 28 79 0 0 chr2 10592431 10592494 -242664089 + GC_rich Low_complexity Low_complexity 1 63 0 2548 59 3 3 chr2 10594324 10594627 -242661956 + AluY SINE Alu 1 303 -8 1497 77 0 0 chr2 10594648 10594829 -242661754 - AluSx SINE Alu -131 181 1 700 139 0 9 chr2 10595392 10595500 -242661083 + AluSq/x SINE Alu 27 133 -179 2194 103 7 3 chr2 10595504 10595804 -242660779 + AluSp SINE Alu 1 301 -12 568 204 10 0 chr2 10596638 10596741 -242659842 + FLAM_A SINE Alu 2 105 -37 309 109 0 0 chr2 10596741 10596787 -242659796 + (TCCC)n Simple_repeat Simple_repeat 1 46 0 2067 135 0 3 chr2 10596787 10597076 -242659507 - AluSx SINE Alu -24 288 1 1114 196 0 20 chr2 10597079 10597278 -242659305 + AluJo SINE Alu 105 299 -13 1619 117 0 22 chr2 10597322 10597552 -242659031 + AluSq SINE Alu 1 225 -88 494 189 42 0 chr2 10597652 10597747 -242658836 + AluSg/x SINE Alu 209 307 -3 476 61 122 0 chr2 10597752 10597850 -242658733 + GA-rich Low_complexity Low_complexity 4 113 0 243 279 177 0 chr2 10597931 10598010 -242658573 + MIR SINE MIR 58 150 -112 2069 229 49 20 chr2 10598432 10599040 -242657543 + L1ME2 LINE L1 5519 6144 -20 262 268 17 82 chr2 10599098 10599329 -242657254 + L1MC4 LINE L1 7826 8041 -1 2055 143 3 3 chr2 10599845 10600145 -242656438 - AluJb SINE Alu -12 300 1 2179 118 7 0 chr2 10600241 10600528 -242656055 - AluSg SINE Alu -21 289 1 1598 225 80 19 chr2 10600952 10601379 -242655204 + LTR40c LTR ERVL 1 453 -12 2381 75 20 10 chr2 10601442 10601737 -242654846 + AluSp SINE Alu 1 298 -15 792 189 0 0 chr2 10601745 10601877 -242654706 + FLAM_C SINE Alu 2 133 0 713 247 11 29 chr2 10602272 10602446 -242654137 - FRAM SINE Alu -7 169 1 1701 93 97 69 chr2 10602684 10602973 -242653610 + AluSg SINE Alu 1 297 -13 2178 253 127 45 chr2 10603144 10603237 -242653346 - L2 LINE L2 -4 3309 3225 1539 168 54 27 chr2 10603237 10603535 -242653048 + AluJb SINE Alu 1 306 -6 2178 253 127 45 chr2 10603535 10604504 -242652079 - L2 LINE L2 -88 3225 2164 287 315 130 0 chr2 10604511 10604619 -242651964 + L3 LINE CR1 989 1110 -467 1410 296 124 42 chr2 10604655 10605122 -242651461 + L2 LINE L2 1835 2262 -1051 1788 93 42 0 chr2 10605122 10605359 -242651224 + AluSc SINE Alu 1 247 -62 1410 296 124 42 chr2 10605359 10606247 -242650336 + L2 LINE L2 2262 3312 -1 496 299 132 37 chr2 10606234 10606559 -242650024 + L3 LINE CR1 1133 1488 -89 * 185 274 0 39 chr2 10606579 10606630 -242649953 + MIR SINE MIR 78 126 -82 255 339 156 0 chr2 10606762 10606871 -242649712 + L2 LINE L2 3177 3302 -11 2533 65 0 7 chr2 10607577 10607886 -242648697 + AluSx SINE Alu 1 307 -5 2502 81 0 0 chr2 10608099 10608406 -242648177 + AluSx SINE Alu 1 307 -5 181 255 20 20 chr2 10608775 10608826 -242647757 + L2 LINE L2 3248 3298 -15 1673 187 26 10 chr2 10608987 10609292 -242647291 + 7SLRNA srpRNA srpRNA 5 314 -6 945 226 88 9 chr2 10609292 10609509 -242647074 + MIR SINE MIR 22 255 -7 908 136 97 24 chr2 10609578 10609784 -242646799 - L1MB8 LINE L1 -1 6177 5957 825 205 58 0 chr2 10609813 10609969 -242646614 - AluJo SINE Alu -39 273 109 930 157 0 7 chr2 10609971 10610118 -242646465 - MER46A DNA MER2_type -90 146 1 384 115 4 4 chr2 10610120 10610176 -242646407 - MLT1A1 LTR MaLR -216 158 99 2377 97 0 3 chr2 10610176 10610486 -242646097 + AluSg SINE Alu 1 309 -1 2233 125 0 0 chr2 10610494 10610791 -242645792 + AluSq SINE Alu 1 297 -16 2135 105 0 74 chr2 10610791 10611115 -242645468 + AluSc SINE Alu 1 300 -9 300 259 56 37 chr2 10611210 10611318 -242645265 + MIR SINE MIR 151 260 -2 1516 168 7 45 chr2 10611611 10611739 -242644844 + AluJo SINE Alu 13 144 -168 2228 102 13 7 chr2 10611739 10612069 -242644514 + AluSq SINE Alu 1 332 0 1516 168 7 45 chr2 10612069 10612230 -242644353 + AluJo SINE Alu 144 293 -19 327 103 17 35 chr2 10612230 10612288 -242644295 + U7 snRNA snRNA 7 63 0 235 307 11 23 chr2 10612299 10612387 -242644196 - L1ME LINE L1 -527 5594 5508 2529 77 0 6 chr2 10612696 10613007 -242643576 - AluSc SINE Alu 0 309 1 2199 108 30 7 chr2 10613071 10613376 -242643207 - AluSq SINE Alu -1 312 1 1980 180 33 19 chr2 10613382 10613397 -242643186 - L1MB3 LINE L1 -37 6146 6133 2057 110 50 0 chr2 10613397 10613679 -242642904 - AluSx SINE Alu -16 296 1 1980 180 33 19 chr2 10613679 10614086 -242642497 - L1MB3 LINE L1 -50 6133 5718 1722 121 0 0 chr2 10614114 10614338 -242642245 - AluSx SINE Alu -88 224 1 2090 139 3 3 chr2 10614365 10614748 -242641835 - AluSc SINE Alu 0 383 1 1596 241 53 80 chr2 10614966 10615025 -242641558 - L1MC4 LINE L1 -2 8040 7981 2339 113 3 0 chr2 10615025 10615335 -242641248 + AluSp SINE Alu 1 311 -2 1596 241 53 80 chr2 10615335 10615617 -242640966 - L1MC4 LINE L1 -61 7981 7693 771 187 0 22 chr2 10615617 10615751 -242640832 + FLAM_A SINE Alu 1 131 -2 1596 241 53 80 chr2 10615751 10615888 -242640695 - L1MC4 LINE L1 -349 7693 7554 1859 124 3 107 chr2 10615888 10616234 -242640349 - AluY SINE Alu -1 310 1 1596 241 53 80 chr2 10616234 10616467 -242640116 - L1MC4 LINE L1 -488 7554 7346 392 159 62 53 chr2 10616477 10616590 -242639993 - L1ME2 LINE L1 0 6164 6051 191 347 92 10 chr2 10616749 10616847 -242639736 + MIR SINE MIR 45 150 -58 2303 111 3 3 chr2 10616886 10617192 -242639391 + AluSq SINE Alu 1 306 -7 25 51 0 0 chr2 10617210 10617249 -242639334 + AT_rich Low_complexity Low_complexity 1 39 0 880 156 0 0 chr2 10617251 10617379 -242639204 + FLAM_C SINE Alu 1 128 -5 816 248 64 67 chr2 10617399 10617742 -242638841 + L1ME4a LINE L1 5311 5652 -469 396 316 158 34 chr2 10617811 10618077 -242638506 + L1ME4a LINE L1 5634 5906 -215 2104 141 3 0 chr2 10618279 10618584 -242637999 + AluJb SINE Alu 7 312 0 345 218 64 0 chr2 10618697 10618775 -242637808 - L2 LINE L2 0 3272 3190 304 253 181 0 chr2 10618865 10618948 -242637635 + L2 LINE L2 3189 3286 -27 189 245 0 57 chr2 10618996 10619049 -242637534 + L2 LINE L2 3263 3312 -1 236 240 125 60 chr2 10619064 10619264 -242637319 - LTR33 LTR ERVL -6 515 303 220 161 57 218 chr2 10619418 10619542 -242637041 - MIR SINE MIR -86 176 73 405 248 110 9 chr2 10619695 10619804 -242636779 + MIR SINE MIR 93 212 -50 898 143 0 0 chr2 10619864 10619990 -242636593 + AluJ SINE Alu 1 126 -176 684 183 8 38 chr2 10619998 10620129 -242636454 + AluJ SINE Alu 183 309 -3 275 293 63 103 chr2 10620656 10620752 -242635831 - MIR SINE MIR -75 187 100 2374 115 0 0 chr2 10620752 10621064 -242635519 + AluSx SINE Alu 1 312 0 275 293 63 103 chr2 10621064 10621141 -242635442 - MIR SINE MIR -162 100 21 906 271 35 48 chr2 10621268 10621571 -242635012 - L1ME4a LINE L1 -208 5913 5615 2323 73 3 20 chr2 10621571 10621872 -242634711 - AluSc SINE Alu -13 296 1 906 271 35 48 chr2 10621872 10621966 -242634617 - L1ME4a LINE L1 -506 5615 5521 2184 127 10 0 chr2 10622257 10622564 -242634019 - AluSx SINE Alu -2 310 1 2198 74 7 21 chr2 10622581 10622915 -242633668 - AluY SINE Alu 0 330 1 1484 161 48 48 chr2 10622923 10623067 -242633516 - AluJo SINE Alu -21 291 148 2154 85 3 62 chr2 10623067 10623374 -242633209 - AluSp SINE Alu -24 289 1 1484 161 48 48 chr2 10623374 10623520 -242633063 - AluJo SINE Alu -163 149 1 2218 110 0 13 chr2 10624119 10624420 -242632163 + AluSx SINE Alu 7 303 -9 924 152 226 17 chr2 10624423 10624478 -242632105 + Tigger3(Golem) DNA MER2_type 2761 2803 -235 2180 100 11 0 chr2 10624478 10624780 -242631803 + AluSq SINE Alu 2 306 0 924 152 226 17 chr2 10624780 10624953 -242631630 + Tigger3(Golem) DNA MER2_type 2803 3038 0 21 82 0 0 chr2 10624966 10625015 -242631568 + AT_rich Low_complexity Low_complexity 1 49 0 1359 233 10 0 chr2 10625043 10625352 -242631231 - AluSq SINE Alu -1 312 1 2242 99 13 0 chr2 10625496 10625799 -242630784 - AluSx SINE Alu -5 307 1 729 183 0 0 chr2 10626966 10627086 -242629497 + FAM SINE Alu 40 159 -26 234 0 0 0 chr2 10627086 10627112 -242629471 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2193 104 7 19 chr2 10627144 10627452 -242629131 - AluSc SINE Alu -5 304 1 327 70 0 0 chr2 10628181 10628224 -242628359 + Alu SINE Alu 1 43 -260 331 330 26 9 chr2 10628319 10628434 -242628149 - MIR SINE MIR -144 118 2 204 111 0 0 chr2 10628501 10628537 -242628046 + (T)n Simple_repeat Simple_repeat 1 36 0 23 33 0 0 chr2 10628538 10628568 -242628015 + AT_rich Low_complexity Low_complexity 1 30 0 2164 102 17 3 chr2 10628577 10628871 -242627712 + AluSx SINE Alu 1 298 -14 216 258 196 21 chr2 10629077 10629174 -242627409 - L2 LINE L2 -14 3258 3145 360 264 44 0 chr2 10629444 10629535 -242627048 - L2 LINE L2 -17 3255 3161 499 203 168 98 chr2 10630029 10630285 -242626298 - MLT1B LTR MaLR 0 390 117 232 159 23 0 chr2 10630549 10630593 -242625990 + MIR SINE MIR 111 155 -107 2327 101 0 0 chr2 10630617 10630913 -242625670 - AluSg SINE Alu -13 297 2 2212 104 0 23 chr2 10633157 10633456 -242623127 + AluSg SINE Alu 1 292 -18 387 277 22 82 chr2 10634795 10634969 -242621614 - MIR SINE MIR -40 168 2 21 36 0 0 chr2 10635062 10635090 -242621493 + AT_rich Low_complexity Low_complexity 1 28 0 309 173 0 0 chr2 10635092 10635144 -242621439 + L1MD2 LINE L1 6183 6234 -125 323 209 0 114 chr2 10635149 10635350 -242621233 + (TATAG)n Simple_repeat Simple_repeat 3 180 0 466 192 48 0 chr2 10635398 10635502 -242621081 + L1MD2 LINE L1 6251 6359 0 21 0 0 0 chr2 10635592 10635613 -242620970 + AT_rich Low_complexity Low_complexity 1 21 0 1988 153 0 7 chr2 10635616 10635917 -242620666 - AluSx SINE Alu 0 312 14 2322 113 0 0 chr2 10635924 10636225 -242620358 - AluSx SINE Alu -11 301 1 57 61 0 0 chr2 10636229 10636328 -242620255 + AT_rich Low_complexity Low_complexity 1 99 0 209 318 238 14 chr2 10637667 10637890 -242618693 + L3 LINE CR1 1200 1472 -105 2132 132 13 0 chr2 10637890 10638194 -242618389 + AluSx SINE Alu 1 308 -4 2309 96 3 0 chr2 10638584 10638876 -242617707 + AluSp SINE Alu 1 293 -20 229 294 47 35 chr2 10639288 10639373 -242617210 - L2 LINE L2 -33 3239 3154 339 225 232 0 chr2 10640608 10640746 -242615837 - MIR SINE MIR -12 250 81 2153 115 0 0 chr2 10641852 10642147 -242614436 - AluSx SINE Alu -17 295 1 200 242 116 32 chr2 10643774 10643869 -242612714 - MIR SINE MIR -52 210 108 201 213 0 0 chr2 10644731 10644778 -242611805 + (TG)n Simple_repeat Simple_repeat 1 47 0 1832 115 17 20 chr2 10646688 10646983 -242609600 - AluSq SINE Alu -14 299 6 2041 121 3 16 chr2 10649513 10649826 -242606757 - AluSq SINE Alu -4 309 1 282 56 0 0 chr2 10649846 10649882 -242606701 + (TA)n Simple_repeat Simple_repeat 2 37 0 1549 111 9 0 chr2 10649899 10650125 -242606458 + AluSq SINE Alu 79 306 -7 2189 81 7 7 chr2 10651167 10651462 -242605121 - AluSx SINE Alu -16 296 2 1090 100 0 19 chr2 10651742 10651902 -242604681 + AluSg/x SINE Alu 130 286 -24 1215 101 0 17 chr2 10652256 10652434 -242604149 + AluSg/x SINE Alu 130 304 -6 1024 121 54 24 chr2 10653374 10653481 -242603102 + AluSx SINE Alu 21 136 -176 2264 103 0 10 chr2 10653481 10653791 -242602792 + AluSc SINE Alu 1 307 -2 1024 121 54 24 chr2 10653791 10653849 -242602734 + AluSx SINE Alu 136 191 -121 1574 156 48 4 chr2 10656653 10656923 -242599660 - AluSx SINE Alu -18 294 13 638 87 109 0 chr2 10657023 10657115 -242599468 + AluSx SINE Alu 181 282 -30 253 208 0 0 chr2 10657765 10657813 -242598770 - MER91 DNA MER1_type 0 190 143 2210 115 0 3 chr2 10658585 10658898 -242597685 + AluSx SINE Alu 1 312 0 1411 98 0 5 chr2 10659175 10659369 -242597214 + AluSq SINE Alu 1 193 -120 194 260 40 0 chr2 10660023 10660073 -242596510 + MIR SINE MIR 31 82 -180 495 213 125 7 chr2 10660129 10660210 -242596373 + MIR SINE MIR 111 181 -81 231 61 0 0 chr2 10660210 10660243 -242596340 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 495 213 125 7 chr2 10660243 10660297 -242596286 + MIR SINE MIR 181 262 0 1967 117 32 0 chr2 10660783 10661066 -242595517 - AluSx SINE Alu -12 300 9 1404 159 13 0 chr2 10661653 10661892 -242594691 - AluJb SINE Alu -13 299 58 1696 178 0 7 chr2 10661939 10662248 -242594335 - AluSx SINE Alu 0 307 1 762 151 0 0 chr2 10664205 10664324 -242592259 - AluSx SINE Alu 0 312 194 1060 113 0 0 chr2 10664325 10664466 -242592117 - AluSx SINE Alu -171 141 1 1750 127 7 7 chr2 10664956 10665231 -242591352 + AluSx SINE Alu 9 283 -29 23 33 0 0 chr2 10665570 10665600 -242590983 + GC_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr2 10665805 10665831 -242590752 + GC_rich Low_complexity Low_complexity 1 26 0 257 254 55 55 chr2 10666370 10666480 -242590103 + MER69 DNA AcHobo 32 141 -1085 700 177 8 0 chr2 10666498 10666622 -242589961 - FRAM SINE Alu -54 122 1 1405 108 0 0 chr2 10666630 10666824 -242589759 - AluSp SINE Alu -13 300 107 1470 103 0 0 chr2 10666824 10667019 -242589564 - AluSp SINE Alu -118 195 1 282 222 48 0 chr2 10667020 10667083 -242589500 + MER69 DNA AcHobo 132 197 -1029 180 225 0 0 chr2 10667200 10667240 -242589343 - L2 LINE L2 -227 3045 3006 1289 171 3 71 chr2 10668422 10668479 -242588104 - L1MB4 LINE L1 0 6180 6121 371 150 17 0 chr2 10668479 10668539 -242588044 - U7 snRNA snRNA 0 63 3 2142 98 10 3 chr2 10668543 10668839 -242587744 - AluSx SINE Alu -14 298 1 1289 171 3 71 chr2 10668839 10669066 -242587517 - L1MB4 LINE L1 -62 6118 5911 2194 99 3 13 chr2 10669066 10669380 -242587203 - AluSq SINE Alu -2 311 1 1289 171 3 71 chr2 10669380 10669398 -242587185 - L1MB4 LINE L1 -269 5911 5893 435 289 4 83 chr2 10669427 10669693 -242586890 - L1MC4 LINE L1 -371 7671 7427 265 272 102 39 chr2 10670698 10670904 -242585679 + MLT1J1 LTR MaLR 228 446 0 2260 174 33 8 chr2 10671118 10671161 -242585422 - L1MB3 LINE L1 -12 6159 6119 1838 140 7 20 chr2 10671161 10671461 -242585122 - AluJb SINE Alu -16 296 1 2260 174 33 8 chr2 10671461 10671476 -242585107 - L1MB3 LINE L1 -52 6119 6106 1888 126 7 11 chr2 10671476 10671817 -242584766 - AluSp SINE Alu 0 340 1 2260 174 33 8 chr2 10671817 10672231 -242584352 - L1MB3 LINE L1 -65 6106 5711 1779 219 82 13 chr2 10672490 10672941 -242583642 + LTR65 LTR ERV1 167 648 -21 294 284 42 21 chr2 10672958 10673053 -242583530 - MIR SINE MIR -60 202 106 1507 243 43 102 chr2 10673063 10673713 -242582870 - LTR9 LTR ERV1 0 612 1 479 259 98 51 chr2 10673725 10673961 -242582622 - MLT1G1 LTR MaLR -163 432 186 270 263 25 12 chr2 10673988 10674068 -242582515 - MLT1G1 LTR MaLR -500 90 10 240 353 111 24 chr2 10674083 10674372 -242582211 + L2 LINE L2 2959 3272 0 1903 158 3 0 chr2 10674626 10674918 -242581665 - AluJb SINE Alu -19 293 1 22 0 0 0 chr2 10674929 10674951 -242581632 + AT_rich Low_complexity Low_complexity 1 22 0 1883 138 25 0 chr2 10674951 10675233 -242581350 - AluJb SINE Alu -23 289 1 207 0 0 0 chr2 10675243 10675266 -242581317 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2335 62 0 0 chr2 10675268 10675556 -242581027 - AluY SINE Alu -23 288 1 366 299 120 37 chr2 10676465 10676682 -242579901 + L2 LINE L2 2396 2630 -684 1063 323 41 31 chr2 10676706 10677124 -242579459 + LTR16A LTR ERVL 1 422 -28 370 358 74 6 chr2 10677158 10677320 -242579263 + LTR16A LTR ERVL 16 188 -262 251 231 0 0 chr2 10677416 10677468 -242579115 + MLT1K LTR MaLR 177 228 -360 470 315 165 9 chr2 10677498 10677819 -242578764 + MLT1K LTR MaLR 184 554 -34 2915 127 36 18 chr2 10677850 10678351 -242578232 + MLT2A1 LTR ERVL 1 519 -1 3392 185 28 6 chr2 10678453 10679306 -242577277 + L1MB8 LINE L1 5117 5992 -186 558 132 0 97 chr2 10679315 10679363 -242577220 + L1MB8 LINE L1 6073 6105 -73 2144 103 10 0 chr2 10679363 10679654 -242576929 - AluSq SINE Alu -19 294 1 558 132 0 97 chr2 10679654 10679719 -242576864 + L1MB8 LINE L1 6105 6175 -3 373 285 201 53 chr2 10679799 10680074 -242576509 + L2 LINE L2 2830 3063 -250 2055 117 3 0 chr2 10680074 10680357 -242576226 - AluSx SINE Alu -28 284 1 373 285 201 53 chr2 10680357 10680498 -242576085 + L2 LINE L2 3063 3308 -5 2115 129 0 0 chr2 10680536 10680831 -242575752 + AluSx SINE Alu 1 295 -17 22 0 0 0 chr2 10680892 10680914 -242575669 + AT_rich Low_complexity Low_complexity 1 22 0 1878 143 26 32 chr2 10680930 10681272 -242575311 - L1MC1 LINE L1 -6 6327 5988 218 269 19 0 chr2 10682638 10682690 -242573893 + L2 LINE L2 2577 2629 -685 263 132 0 19 chr2 10682703 10682756 -242573827 - L1MA3 LINE L1 0 6305 6254 274 285 183 37 chr2 10682983 10683278 -242573305 + L2 LINE L2 2934 3271 -1 183 204 41 0 chr2 10684897 10684946 -242571637 - L2 LINE L2 -37 3235 3185 606 105 0 0 chr2 10684955 10685041 -242571542 + AluJ/FRAM SINE Alu 227 312 0 395 265 10 10 chr2 10685041 10685139 -242571444 - L2 LINE L2 -4 3309 3212 629 299 56 0 chr2 10685142 10685376 -242571207 + L1ME3A LINE L1 5595 5841 -329 546 91 0 0 chr2 10687693 10687770 -242568813 + (TTCC)n Simple_repeat Simple_repeat 1 77 0 2067 107 10 3 chr2 10687771 10688061 -242568522 - AluSx SINE Alu -19 293 2 2171 88 3 7 chr2 10688764 10689060 -242567523 + AluSx SINE Alu 1 295 -17 223 105 0 0 chr2 10689350 10689388 -242567195 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 763 178 0 0 chr2 10689388 10689506 -242567077 - FLAM_C SINE Alu -24 119 2 661 189 128 19 chr2 10689545 10689763 -242566820 - L1MB7 LINE L1 0 6168 5933 576 256 63 49 chr2 10690488 10690711 -242565872 - MIR SINE MIR -13 249 24 234 0 0 0 chr2 10690893 10690919 -242565664 + (TG)n Simple_repeat Simple_repeat 1 26 0 354 232 152 56 chr2 10691299 10691424 -242565159 - L2 LINE L2 0 3313 3177 1640 184 122 6 chr2 10692227 10692554 -242564029 - MLT1A1 LTR MaLR 0 365 1 195 294 0 0 chr2 10692971 10693022 -242563561 - MIR SINE MIR -6 256 206 291 238 159 72 chr2 10693697 10693800 -242562783 - LTR50 LTR ERVL 0 795 702 1207 207 194 20 chr2 10693800 10694196 -242562387 + MLT1C LTR MaLR 1 465 -2 291 238 159 72 chr2 10694196 10694382 -242562201 - LTR50 LTR ERVL -93 702 481 198 0 0 0 chr2 10694472 10694494 -242562089 + (GA)n Simple_repeat Simple_repeat 2 23 0 670 186 22 71 chr2 10694631 10694814 -242561769 - LTR41 LTR ERVL -599 174 1 247 348 160 8 chr2 10695004 10695129 -242561454 - MIR SINE MIR -71 137 11 548 252 39 32 chr2 10695882 10695938 -242560645 - MIR SINE MIR -7 255 201 2246 119 0 10 chr2 10695938 10696250 -242560333 - AluSq SINE Alu -4 309 1 548 252 39 32 chr2 10696250 10696348 -242560235 - MIR SINE MIR -61 201 100 185 0 0 39 chr2 10696820 10696846 -242559737 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 224 279 44 15 chr2 10696931 10696999 -242559584 - MIR SINE MIR -171 91 22 331 271 44 117 chr2 10697243 10697560 -242559023 - L2 LINE L2 -346 2968 2675 2239 120 0 0 chr2 10697725 10698026 -242558557 - AluSx SINE Alu -11 301 1 769 276 113 16 chr2 10698083 10698461 -242558122 - L1MC4a LINE L1 -296 5825 5524 317 198 22 0 chr2 10698923 10699014 -242557569 - MER96 DNA MER1_type? -82 93 1 181 276 58 11 chr2 10701106 10701193 -242555390 - MIR3 SINE MIR -103 105 15 220 231 77 77 chr2 10701377 10701455 -242555128 - MIR SINE MIR -16 246 169 298 268 99 42 chr2 10701938 10702080 -242554503 + MIR SINE MIR 47 196 -66 2396 117 120 5 chr2 10702220 10702604 -242553979 - MSTA LTR MaLR 0 428 1 441 134 0 37 chr2 10702604 10702686 -242553897 - MSTA-int LTR MaLR 0 1580 1502 2270 102 0 0 chr2 10702686 10702979 -242553604 - AluSx SINE Alu -19 293 1 533 237 10 110 chr2 10703031 10703108 -242553475 + MER34 LTR ERV1 281 364 -178 4590 97 4 39 chr2 10703108 10703511 -242553072 + MER4A LTR ERV1 1 416 -248 1971 164 0 3 chr2 10703511 10703822 -242552761 + AluJb SINE Alu 1 310 -2 4590 97 4 39 chr2 10703822 10703965 -242552618 + MER4A LTR ERV1 416 521 -143 2323 101 0 7 chr2 10703965 10704261 -242552322 + AluSx SINE Alu 1 294 -18 4590 97 4 39 chr2 10704261 10704401 -242552182 + MER4A LTR ERV1 521 664 0 533 237 10 110 chr2 10704401 10704614 -242551969 + MER34 LTR ERV1 364 542 0 1609 175 26 0 chr2 10704614 10704917 -242551666 - L1MB3 LINE L1 -74 6109 5799 336 200 100 12 chr2 10704917 10704997 -242551586 + MER21B LTR ERV1 1 87 -776 2764 256 46 8 chr2 10705021 10705779 -242550804 + MER21B LTR ERV1 19 805 -58 2509 162 11 62 chr2 10705805 10706362 -242550221 - L1MB3 LINE L1 -371 5812 5287 2353 93 7 0 chr2 10706993 10707295 -242549288 - AluSp SINE Alu -9 304 1 820 233 112 43 chr2 10707440 10707814 -242548769 + MER110A LTR ERV1 39 438 -30 448 228 81 47 chr2 10708586 10708735 -242547848 + MIR SINE MIR 20 173 -89 493 205 0 0 chr2 10710448 10710531 -242546052 - AluJ/FLAM SINE Alu -228 84 2 2436 87 0 0 chr2 10710598 10710897 -242545686 + AluSg SINE Alu 1 299 -11 618 227 28 0 chr2 10711130 10711271 -242545312 - MER58A DNA MER1_type -44 180 36 215 297 72 45 chr2 10711496 10711607 -242544976 - MIR SINE MIR -30 232 119 2476 58 27 0 chr2 10712012 10712304 -242544279 - AluY SINE Alu -11 300 1 819 168 0 0 chr2 10712352 10712477 -242544106 + FLAM_A SINE Alu 18 142 0 203 252 107 48 chr2 10712846 10712949 -242543634 - MIR SINE MIR -59 203 95 2242 119 3 3 chr2 10713854 10714166 -242542417 + AluSx SINE Alu 1 312 0 2015 116 38 20 chr2 10714248 10714541 -242542042 + AluSx SINE Alu 1 298 -14 184 308 221 29 chr2 10714670 10714774 -242541809 + MER5A DNA MER1_type 65 188 -1 * 193 222 44 0 chr2 10714774 10714816 -242541767 - MIR3 SINE MIR -52 156 113 203 268 18 0 chr2 10714960 10715016 -242541567 + GA-rich Low_complexity Low_complexity 4 60 0 274 215 118 0 chr2 10715122 10715224 -242541359 - L1ME LINE L1 -306 5856 5743 373 253 120 19 chr2 10715279 10715437 -242541146 - MIR SINE MIR -27 235 62 204 97 0 0 chr2 10715855 10715886 -242540697 + (A)n Simple_repeat Simple_repeat 1 31 0 1132 224 88 58 chr2 10715924 10716170 -242540413 + Charlie4a DNA MER1_type 37 274 -1687 1391 171 0 0 chr2 10716170 10716404 -242540179 + MER46A DNA MER2_type 3 236 0 1132 224 88 58 chr2 10716404 10716532 -242540051 + Charlie4a DNA MER1_type 274 430 -1531 1612 185 9 64 chr2 10716532 10716862 -242539721 - AluJb SINE Alu 0 312 1 1132 224 88 58 chr2 10716862 10716938 -242539645 + Charlie4a DNA MER1_type 430 502 -6 1810 167 11 0 chr2 10716954 10717236 -242539347 + AluJb SINE Alu 7 291 -21 314 304 80 9 chr2 10718839 10718951 -242537632 - MIR SINE MIR -38 224 105 187 150 25 25 chr2 10719061 10719101 -242537482 + L2 LINE L2 3176 3215 -98 2478 80 3 0 chr2 10719108 10719408 -242537175 - AluSp SINE Alu -12 301 1 383 200 12 0 chr2 10719721 10719801 -242536782 + Tigger3(Golem) DNA MER2_type 28 108 -2921 * 506 131 39 108 chr2 10719793 10719855 -242536728 + Tigger3(Golem) DNA MER2_type 2279 2329 -700 2581 62 0 0 chr2 10719855 10720159 -242536424 - AluY SINE Alu -7 304 1 506 131 39 108 chr2 10720159 10720226 -242536357 + Tigger3(Golem) DNA MER2_type 2329 2399 -630 6021 25 5 0 chr2 10720227 10720974 -242535609 - L1P LINE L1 -1097 5049 4299 7451 15 42 0 chr2 10720974 10721989 -242534594 + L1PA2 LINE L1 5104 6155 0 454 132 49 56 chr2 10721991 10722037 -242534546 + Tigger3(Golem) DNA MER2_type 2381 2426 -603 1951 130 23 23 chr2 10722037 10722344 -242534239 + AluJo SINE Alu 1 307 -5 454 132 49 56 chr2 10722344 10722441 -242534142 + Tigger3(Golem) DNA MER2_type 2426 2523 -506 640 199 7 41 chr2 10722447 10722593 -242533990 + FLAM_C SINE Alu 3 143 0 229 135 19 0 chr2 10722594 10722646 -242533937 + Tigger3(Golem) DNA MER2_type 2515 2567 -462 1616 142 45 7 chr2 10722651 10722939 -242533644 + Tigger3(Golem) DNA MER2_type 2682 2980 -49 1638 148 79 11 chr2 10723163 10723441 -242533142 - AluJo SINE Alu -15 297 1 226 286 0 0 chr2 10723481 10723551 -242533032 - L1M4 LINE L1 -2225 3921 3852 216 293 157 36 chr2 10723750 10723890 -242532693 - MIR SINE MIR -42 220 64 276 281 47 47 chr2 10724033 10724161 -242532422 - L2 LINE L2 -523 2791 2664 224 274 271 31 chr2 10724221 10724579 -242532004 - L2 LINE L2 -1343 1971 1528 961 162 203 22 chr2 10724668 10724777 -242531806 + MER33 DNA MER1_type 5 93 -2492 2071 102 60 0 chr2 10724777 10725060 -242531523 - AluSx SINE Alu -12 300 1 961 162 203 22 chr2 10725060 10725221 -242531362 + MER33 DNA MER1_type 93 324 0 1200 137 188 74 chr2 10725346 10725617 -242530966 + AluJb SINE Alu 1 302 0 545 297 120 0 chr2 10726067 10726242 -242530341 - MIR SINE MIR -28 234 39 1372 187 126 0 chr2 10727200 10727462 -242529121 + AluJo SINE Alu 2 296 -6 520 160 36 75 chr2 10727462 10727630 -242528953 - MIR SINE MIR -60 202 47 2247 76 21 7 chr2 10727870 10728161 -242528422 - AluSp SINE Alu -18 295 1 23 33 0 0 chr2 10728527 10728557 -242528026 + GC_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr2 10728762 10728788 -242527795 + GC_rich Low_complexity Low_complexity 1 26 0 291 198 83 62 chr2 10729296 10729392 -242527191 + MIR SINE MIR 89 186 -76 2162 124 3 7 chr2 10729392 10729698 -242526885 + AluSq SINE Alu 1 305 -8 230 261 80 0 chr2 10729710 10729798 -242526785 + L1MEc LINE L1 1408 1502 -4894 209 227 0 27 chr2 10729815 10729890 -242526693 + CT-rich Low_complexity Low_complexity 3 75 0 2073 105 0 44 chr2 10729962 10730278 -242526305 - AluSx SINE Alu 0 303 1 923 130 0 15 chr2 10730298 10730429 -242526154 - AluJb SINE Alu -183 129 1 1053 309 55 28 chr2 10730434 10731258 -242525325 - L1M4 LINE L1 -964 5182 4337 817 142 0 17 chr2 10731288 10731408 -242525175 - FLAM_C SINE Alu -25 118 1 634 208 0 0 chr2 10731456 10731562 -242525021 + AluJb SINE Alu 190 295 -17 714 239 95 104 chr2 10731587 10732010 -242524573 + L1ME3A LINE L1 5533 5951 -219 2485 204 29 18 chr2 10732354 10732898 -242523685 + MER44D DNA MER2_type 1 605 0 320 307 112 13 chr2 10733442 10733619 -242522964 - MIR SINE MIR -56 152 3 539 246 119 42 chr2 10733742 10733978 -242522605 + MLT1L LTR MaLR 42 295 -320 238 244 87 61 chr2 10734520 10734635 -242521948 + MLT1L LTR MaLR 178 295 -320 860 260 132 3 chr2 10736736 10737063 -242519520 - MLT1B LTR MaLR -1 389 21 252 254 0 0 chr2 10737525 10737580 -242519003 + (TG)n Simple_repeat Simple_repeat 1 55 0 23 0 0 0 chr2 10739337 10739360 -242517223 + AT_rich Low_complexity Low_complexity 1 23 0 452 320 88 24 chr2 10739433 10739764 -242516819 + LTR16A LTR ERVL 99 450 0 276 278 0 0 chr2 10740170 10740224 -242516359 - MER91A DNA MER1_type -3 187 134 687 291 23 0 chr2 10740276 10740451 -242516132 - MER91A DNA MER1_type -17 179 1 413 297 22 7 chr2 10740623 10740774 -242515809 - MIR SINE MIR -57 151 37 347 345 62 7 chr2 10740823 10740968 -242515615 - MIR3 SINE MIR -15 193 41 252 211 74 42 chr2 10742461 10742556 -242514027 - MIR SINE MIR -95 113 16 1184 201 132 3 chr2 10742909 10743212 -242513371 + L1MC1 LINE L1 5992 6333 0 326 287 80 0 chr2 10743231 10743381 -242513202 - MER112 DNA MER1_type -11 249 88 193 184 0 0 chr2 10743427 10743465 -242513118 - MIR SINE MIR -125 137 100 193 177 51 165 chr2 10743799 10743858 -242512725 - L2 LINE L2 0 3313 3264 186 43 0 0 chr2 10743858 10743881 -242512702 + (CA)n Simple_repeat Simple_repeat 1 23 0 193 177 51 165 chr2 10743881 10743900 -242512683 - L2 LINE L2 -49 3264 3244 1680 242 82 11 chr2 10744265 10744789 -242511794 - MER74B LTR ERVL -59 563 3 2022 190 73 7 chr2 10745582 10746019 -242510564 + MLT1C LTR MaLR 2 467 0 2073 113 3 7 chr2 10746042 10746335 -242510248 - AluSg SINE Alu -14 296 5 267 159 0 0 chr2 10746335 10746379 -242510204 - Alu SINE Alu -258 44 1 197 304 0 36 chr2 10746387 10746443 -242510140 + MIR SINE MIR 105 152 -56 215 383 12 0 chr2 10746803 10746884 -242509699 - L2 LINE L2 -31 3241 3160 448 274 20 26 chr2 10747009 10747162 -242509421 + MER3 DNA MER1_type 1 152 -57 1256 199 78 57 chr2 10747163 10747452 -242509131 - L1MB8 LINE L1 -9 6169 5887 198 0 0 0 chr2 10747452 10747474 -242509109 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 2040 110 32 0 chr2 10747475 10747756 -242508827 - AluSx SINE Alu -22 290 1 1256 199 78 57 chr2 10747756 10747851 -242508732 - L1MB8 LINE L1 -290 5888 5775 1864 164 3 26 chr2 10749397 10749709 -242506874 + AluJb SINE Alu 5 309 -3 321 100 0 0 chr2 10749709 10749759 -242506824 + (CA)n Simple_repeat Simple_repeat 2 51 0 1093 240 75 9 chr2 10749790 10750123 -242506460 - MER90 LTR ERV1 -1 613 259 490 319 43 11 chr2 10751324 10751512 -242505071 + MIR SINE MIR 16 209 -53 194 345 35 26 chr2 10751552 10751665 -242504918 + L3 LINE CR1 1109 1222 -355 1146 244 47 22 chr2 10752617 10752804 -242503779 - MLT1B LTR MaLR -17 373 192 2212 85 52 36 chr2 10752804 10753110 -242503473 - AluSx SINE Alu -1 311 1 1146 244 47 22 chr2 10753110 10753286 -242503297 - MLT1B LTR MaLR -198 192 1 571 281 45 11 chr2 10753311 10753532 -242503051 + MIR SINE MIR 17 244 -18 293 368 105 13 chr2 10753868 10754020 -242502563 - L2 LINE L2 -14 3258 3093 210 231 0 0 chr2 10754090 10754142 -242502441 - MIR SINE MIR -91 117 66 192 338 22 37 chr2 10755060 10755196 -242501387 + MIR3 SINE MIR 30 163 -45 411 325 110 0 chr2 10755239 10755393 -242501190 + MIR SINE MIR 35 205 -57 1525 237 47 24 chr2 10755443 10755895 -242500688 + MLT1C LTR MaLR 6 467 0 713 271 22 118 chr2 10756375 10757095 -242499488 - L1M4 LINE L1 -4012 3126 2476 189 0 0 0 chr2 10757368 10757389 -242499194 + (A)n Simple_repeat Simple_repeat 1 21 0 2086 116 0 0 chr2 10757396 10757663 -242498920 - AluSg SINE Alu -43 267 1 2534 196 84 55 chr2 10757671 10758916 -242497667 - L1M4 LINE L1 -4532 2425 961 301 275 9 37 chr2 10758935 10759044 -242497539 - L2 LINE L2 0 3272 3167 216 0 0 0 chr2 10759430 10759454 -242497129 + (CCCA)n Simple_repeat Simple_repeat 1 24 0 204 267 10 89 chr2 10759514 10759615 -242496968 - L3 LINE CR1 -896 681 589 2176 133 3 3 chr2 10760369 10760677 -242495906 - AluSx SINE Alu -4 308 1 823 230 0 0 chr2 10760681 10760859 -242495724 - L1M4 LINE L1 -5886 973 796 1529 226 36 67 chr2 10760874 10761321 -242495262 - L1M4 LINE L1 -6422 437 5 2327 106 0 0 chr2 10761462 10761754 -242494829 - AluSp SINE Alu -21 292 1 2225 121 3 0 chr2 10761754 10762051 -242494532 - AluSx SINE Alu -14 298 1 259 217 0 0 chr2 10762132 10762189 -242494394 + MIR SINE MIR 95 143 -65 408 328 54 47 chr2 10762193 10762510 -242494073 + MLT1J LTR MaLR 43 361 -150 1833 195 0 3 chr2 10762529 10762842 -242493741 - AluJo SINE Alu 0 312 1 573 252 8 0 chr2 10762843 10762974 -242493609 + L1ME3 LINE L1 6031 6162 0 199 321 0 0 chr2 10763177 10763233 -242493350 + L2 LINE L2 3214 3269 -3 225 315 0 0 chr2 10763972 10764026 -242492557 - MIR SINE MIR -68 140 87 180 247 149 39 chr2 10764241 10764395 -242492188 - L2 LINE L2 -275 2997 2827 584 212 92 26 chr2 10764848 10765218 -242491365 - MLT1C LTR MaLR -6 461 54 3255 150 51 23 chr2 10765218 10765849 -242490734 + MER51A LTR ERV1 1 640 0 257 179 54 36 chr2 10765849 10765904 -242490679 - MLT1C LTR MaLR -410 57 2 320 324 105 0 chr2 10766616 10766721 -242489862 + MIR SINE MIR 49 164 -98 1637 255 38 24 chr2 10767072 10767596 -242488987 - L1ME1 LINE L1 -2 6176 5664 1453 80 35 0 chr2 10767596 10767795 -242488788 - L1PA10 LINE L1 -5 6163 5958 1637 255 38 24 chr2 10767795 10767847 -242488736 - L1ME1 LINE L1 -514 5664 5614 1228 61 0 0 chr2 10767855 10768003 -242488580 - AluSp/q SINE Alu -8 305 158 182 200 0 29 chr2 10768677 10768712 -242487871 - MIR SINE MIR -7 255 222 221 324 0 15 chr2 10768769 10768837 -242487746 - MIR SINE MIR -166 96 30 848 218 0 6 chr2 10770882 10771061 -242485522 - MLT1B LTR MaLR -1 389 212 1520 173 114 13 chr2 10771078 10771472 -242485111 - LTR48 LTR ERV1 -30 757 324 2311 121 3 0 chr2 10771961 10772266 -242484317 - AluSx SINE Alu -3 309 4 588 246 15 0 chr2 10772278 10772412 -242484171 - MLT1B LTR MaLR -238 136 1 180 239 43 0 chr2 10772477 10772523 -242484060 - MIR SINE MIR -60 148 101 633 234 102 51 chr2 10772720 10772976 -242483607 - MER46C DNA MER2_type -26 312 44 2323 111 0 9 chr2 10773876 10774192 -242482391 - AluSq SINE Alu 0 313 1 230 154 0 0 chr2 10774432 10774471 -242482112 - HAL1 LINE L1 -1837 670 632 570 187 129 19 chr2 10774498 10774653 -242481930 - MLT1C LTR MaLR -295 172 1 2571 90 8 8 chr2 10774735 10775090 -242481493 - THE1A LTR MaLR 0 355 1 2928 213 236 35 chr2 10776524 10777504 -242479079 - MLT1K-int LTR MaLR -382 1353 177 3340 164 16 41 chr2 10777694 10778328 -242478255 + LTR35 LTR ERV1 1 618 0 29 0 0 0 chr2 10779537 10779566 -242477017 + AT_rich Low_complexity Low_complexity 1 29 0 2345 83 7 0 chr2 10779694 10779994 -242476589 - AluSg SINE Alu -7 303 2 488 285 107 47 chr2 10780234 10780617 -242475966 - MLT1K LTR MaLR -40 548 143 2313 102 57 25 chr2 10780644 10780997 -242475586 + THE1B LTR MaLR 1 364 0 462 264 51 13 chr2 10781406 10781565 -242475018 - MIR SINE MIR -56 152 38 385 309 40 0 chr2 10781686 10781812 -242474771 + L3 LINE CR1 1419 1549 -28 2081 218 78 18 chr2 10782333 10782958 -242473625 - L1M4 LINE L1 -751 5395 4733 1141 223 14 44 chr2 10782961 10783325 -242473258 - L1M4 LINE L1 -2391 3755 3403 328 333 51 17 chr2 10783386 10783503 -242473080 + L2 LINE L2 3146 3266 -6 414 294 138 33 chr2 10783628 10784019 -242472564 + L1MC/D LINE L1 5349 5780 -2028 2061 199 185 16 chr2 10784156 10784714 -242471869 + MLT1E1 LTR MaLR 1 652 -2 240 267 19 57 chr2 10785319 10785424 -242471159 - MIR SINE MIR -54 208 108 234 243 27 0 chr2 10785611 10785685 -242470898 + G-rich Low_complexity Low_complexity 5 80 0 5423 34 2 0 chr2 10785759 10786351 -242470232 - SVA Other Other 0 1386 794 245 0 0 166 chr2 10786575 10786925 -242469658 + (GTGTG)n Simple_repeat Simple_repeat 1 291 0 337 289 98 64 chr2 10786978 10787182 -242469401 - MIR SINE MIR -31 231 21 453 253 37 19 chr2 10787489 10787651 -242468932 + LTR16C LTR ERVL 76 240 -251 205 211 100 78 chr2 10788206 10788296 -242468287 + MIR SINE MIR 41 132 -76 224 315 161 15 chr2 10788599 10788729 -242467854 + L2 LINE L2 3122 3270 -2 956 118 0 0 chr2 10789791 10789935 -242466648 - L1MA2 LINE L1 0 6304 6161 1536 178 113 9 chr2 10790604 10790941 -242465642 + MLT1A2 LTR MaLR 1 372 -2 319 302 166 7 chr2 10791019 10791158 -242465425 + MIR SINE MIR 28 188 -74 1860 146 13 49 chr2 10791374 10791682 -242464901 - AluSx SINE Alu -15 297 1 30 45 0 0 chr2 10791866 10791910 -242464673 + AT_rich Low_complexity Low_complexity 1 44 0 542 355 55 4 chr2 10791914 10792170 -242464413 + L1ME LINE L1 4981 5249 -897 801 287 65 37 chr2 10792186 10792382 -242464201 + L1ME LINE L1 5265 5454 -667 2270 87 14 3 chr2 10792382 10792670 -242463913 + AluSc SINE Alu 1 291 -18 801 287 65 37 chr2 10792670 10792919 -242463664 + L1ME LINE L1 5454 5736 -385 25 0 0 0 chr2 10793076 10793101 -242463482 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr2 10793226 10793255 -242463328 + AT_rich Low_complexity Low_complexity 1 29 0 214 278 0 0 chr2 10794670 10794724 -242461859 - MIR SINE MIR -68 140 87 481 225 155 0 chr2 10795243 10795385 -242461198 + MER45A DNA AcHobo 3 166 -12 2857 178 12 21 chr2 10795428 10796008 -242460575 - L1MB7 LINE L1 -17 6167 5593 309 217 72 12 chr2 10796010 10796093 -242460490 - MER50 LTR ERV1 -130 604 517 1681 172 25 0 chr2 10796132 10796451 -242460132 - L1MB7 LINE L1 -572 5608 5282 914 206 52 4 chr2 10797320 10797568 -242459015 + LTR16C LTR ERVL 232 491 0 610 285 36 5 chr2 10798421 10798614 -242457969 - MIR SINE MIR -32 230 32 394 292 0 18 chr2 10800640 10800753 -242455830 - MIR SINE MIR -118 144 34 615 222 84 67 chr2 10801762 10801881 -242454702 - LTR37A LTR ERV1 -25 401 285 411 38 0 0 chr2 10801881 10801934 -242454649 + (TG)n Simple_repeat Simple_repeat 1 53 0 615 222 84 67 chr2 10801934 10802170 -242454413 - LTR37A LTR ERV1 -141 285 40 225 65 0 0 chr2 10802189 10802220 -242454363 + (TATG)n Simple_repeat Simple_repeat 2 32 0 2101 117 74 14 chr2 10802263 10802615 -242453968 - THE1C LTR MaLR -2 373 1 648 256 134 20 chr2 10803038 10803292 -242453291 - L2 LINE L2 0 3313 3031 707 277 60 16 chr2 10803356 10803605 -242452978 + Zaphod DNA AcHobo 3740 3999 -32 646 246 33 15 chr2 10805079 10805307 -242451276 + MER106B DNA MER1_type 1 1059 0 797 239 164 109 chr2 10805394 10806260 -242450323 - L2 LINE L2 0 3313 2417 793 294 58 55 chr2 10806923 10807321 -242449262 + HAL1 LINE L1 775 1173 -1334 3011 94 34 0 chr2 10807334 10807748 -242448835 - MSTA LTR MaLR 0 428 1 802 138 51 29 chr2 10807909 10808047 -242448536 - FLAM_C SINE Alu -2 141 1 351 368 96 18 chr2 10808151 10808371 -242448212 + HAL1b LINE L1 410 646 -702 1867 137 13 23 chr2 10808493 10808792 -242447791 + AluSx SINE Alu 1 296 -16 307 294 0 10 chr2 10809182 10809284 -242447299 + MIR SINE MIR 152 252 -10 231 247 39 52 chr2 10809447 10809524 -242447059 + L1ME4a LINE L1 5781 5856 -265 318 26 0 0 chr2 10809611 10809650 -242446933 + (CA)n Simple_repeat Simple_repeat 2 40 0 333 261 51 58 chr2 10809654 10809792 -242446791 + L1ME4a LINE L1 5984 6120 -1 300 400 20 0 chr2 10811449 10811599 -242444984 - MIR3 SINE MIR -8 200 48 255 328 172 0 chr2 10811891 10812007 -242444576 - L2 LINE L2 -4 3268 3133 279 357 60 43 chr2 10813500 10813685 -242442898 - L2 LINE L2 -5 3267 3080 856 191 36 0 chr2 10813910 10814078 -242442505 + MER5B DNA MER1_type 4 177 -1 378 250 19 37 chr2 10814606 10814714 -242441869 - MIR SINE MIR -113 149 44 180 321 184 9 chr2 10814836 10814945 -242441638 - L2 LINE L2 -24 3248 3121 2345 96 10 10 chr2 10815252 10815565 -242441018 - AluSq SINE Alu 0 313 1 238 276 26 13 chr2 10816195 10816271 -242440312 + MIR3 SINE MIR 124 200 -8 291 210 16 0 chr2 10817627 10817689 -242438894 - MER103 DNA DNA -87 79 17 671 236 14 48 chr2 10818021 10818229 -242438354 + MER112 DNA MER1_type 28 228 -32 259 264 148 22 chr2 10818255 10818437 -242438146 - Charlie8 DNA MER1_type -2135 282 78 2067 106 3 61 chr2 10818452 10818781 -242437802 + AluSg SINE Alu 1 310 0 421 288 119 30 chr2 10819511 10819851 -242436732 - MLT1J LTR MaLR -5 610 136 249 163 0 0 chr2 10819909 10819958 -242436625 + A-rich Low_complexity Low_complexity 1 49 0 311 368 121 4 chr2 10820112 10820351 -242436232 - L2 LINE L2 -796 2518 2252 1742 223 71 2 chr2 10820655 10821077 -242435506 - MLT1C LTR MaLR 0 467 17 2036 120 60 43 chr2 10822423 10822791 -242433792 + THE1C LTR MaLR 2 375 0 1942 201 49 27 chr2 10823787 10824235 -242432348 - L1MDa LINE L1 -6058 482 25 330 194 0 0 chr2 10824530 10824602 -242431981 + GA-rich Low_complexity Low_complexity 2 73 0 2305 94 0 13 chr2 10826950 10827258 -242429325 - AluY SINE Alu -7 304 1 627 255 13 106 chr2 10827335 10827637 -242428946 + L2 LINE L2 2966 3239 -74 186 43 0 0 chr2 10828142 10828165 -242428418 + (GGAA)n Simple_repeat Simple_repeat 3 25 0 41867 30 21 1 chr2 10828923 10834954 -242421629 - L1HS LINE L1 0 6155 1 259 295 196 48 chr2 10835374 10835875 -242420708 - L2 LINE L2 -354 2960 2386 1879 187 48 41 chr2 10836064 10836525 -242420058 + MLT1C LTR MaLR 4 467 0 195 387 65 0 chr2 10837752 10837876 -242418707 - MIR SINE MIR -6 256 125 948 258 127 39 chr2 10838775 10839212 -242417371 + MLT1D LTR MaLR 1 481 -24 213 94 0 0 chr2 10839212 10839244 -242417339 + (TTAGGG)n Simple_repeat Simple_repeat 4 35 0 948 258 127 39 chr2 10839244 10839263 -242417320 + MLT1D LTR MaLR 481 497 -8 533 305 13 7 chr2 10839365 10839516 -242417067 - MIR SINE MIR -98 164 13 301 293 109 46 chr2 10839552 10839726 -242416857 + L1ME4a LINE L1 5707 5891 -230 256 340 28 0 chr2 10839945 10840051 -242416532 + MIR SINE MIR 99 207 -55 1314 33 0 0 chr2 10840352 10840546 -242416037 + L1PA3 LINE L1 5994 6187 0 1082 57 0 0 chr2 10841389 10841529 -242415054 - L1P2 LINE L1 -432 5722 5583 1125 62 0 0 chr2 10841529 10841664 -242414919 + L1PA5 LINE L1 6010 6154 0 336 85 0 0 chr2 10842076 10842123 -242414460 + MADE1 DNA Mariner 34 80 0 38 75 0 0 chr2 10842151 10842231 -242414352 + AT_rich Low_complexity Low_complexity 1 80 0 357 220 11 22 chr2 10842309 10842400 -242414183 + L1MC5 LINE L1 7824 7913 -48 3217 87 9 9 chr2 10843644 10844093 -242412490 + L1PA13 LINE L1 5709 6157 -6 2028 190 94 14 chr2 10844133 10844570 -242412013 + MER70A LTR ERVL 1 472 0 2147 133 0 16 chr2 10844662 10844978 -242411605 + AluSx SINE Alu 1 311 -1 258 32 0 0 chr2 10845597 10845628 -242410955 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2128 142 3 0 chr2 10845638 10845941 -242410642 - AluSx SINE Alu -8 304 1 2468 123 39 14 chr2 10845947 10846363 -242410220 + MSTA LTR MaLR 1 426 -2 840 253 29 17 chr2 10846449 10846690 -242409893 + MIR SINE MIR 8 251 -11 253 296 0 0 chr2 10847073 10847154 -242409429 + MIR SINE MIR 50 130 -132 533 272 47 11 chr2 10847953 10848144 -242408439 + L1M4 LINE L1 4774 4971 -1175 1915 169 3 7 chr2 10849004 10849311 -242407272 - AluJb SINE Alu -2 310 5 242 306 37 28 chr2 10849317 10849425 -242407158 - MIR SINE MIR -123 139 31 227 336 25 25 chr2 10850220 10850342 -242406241 + MIR SINE MIR 20 141 -121 302 125 0 0 chr2 10850361 10850409 -242406174 - MSTA LTR MaLR -36 392 345 231 257 55 28 chr2 10850546 10850655 -242405928 + MIR SINE MIR 81 192 -70 1597 149 163 10 chr2 10850784 10851085 -242405498 - MSTA LTR MaLR -70 358 12 276 350 125 0 chr2 10851990 10852110 -242404473 - L2 LINE L2 -1 3271 3137 1843 125 15 0 chr2 10852889 10853153 -242403430 - MSTC LTR MaLR 0 428 161 2403 221 67 34 chr2 10853156 10853838 -242402745 + MER72 LTR ERV1 5 709 -13 322 138 0 31 chr2 10853838 10853903 -242402680 + MER49 LTR ERV1 861 923 0 894 150 61 0 chr2 10853904 10854051 -242402532 - MSTC LTR MaLR -272 156 1 184 196 157 0 chr2 10854429 10854480 -242402103 - L2 LINE L2 0 3272 3214 2444 164 39 2 chr2 10854560 10854969 -242401614 - MSTB LTR MaLR -2 424 1 2722 150 21 6 chr2 10855390 10855844 -242400739 - LTR45B LTR ERV1 -19 512 7 180 0 0 0 chr2 10857063 10857083 -242399500 + (A)n Simple_repeat Simple_repeat 1 20 0 183 162 0 0 chr2 10857521 10857558 -242399025 + GA-rich Low_complexity Low_complexity 2 38 0 420 283 41 0 chr2 10858841 10858986 -242397597 - LTR67 LTR ERVL -7 550 400 386 253 11 0 chr2 10859459 10859554 -242397029 - MER5A DNA MER1_type -93 96 1 379 276 106 64 chr2 10859782 10860065 -242396518 - HAL1 LINE L1 -648 1859 1565 1458 193 45 65 chr2 10860070 10860368 -242396215 - MLT1D LTR MaLR -93 412 122 2360 80 30 0 chr2 10860368 10860670 -242395913 - AluY SINE Alu 0 311 1 1458 193 45 65 chr2 10860670 10860771 -242395812 - MLT1D LTR MaLR -382 123 21 2193 113 0 0 chr2 10860822 10861141 -242395442 - AluSx SINE Alu 0 319 1 192 77 0 0 chr2 10862044 10862070 -242394513 + (CAA)n Simple_repeat Simple_repeat 2 27 0 438 233 20 64 chr2 10862154 10862356 -242394227 - HAL1 LINE L1 -957 1550 1358 2178 134 0 0 chr2 10862460 10862765 -242393818 + AluSx SINE Alu 1 305 -7 1128 300 102 44 chr2 10862905 10864239 -242392344 - L1ME3A LINE L1 -204 5966 4485 1492 201 4 14 chr2 10864239 10864543 -242392040 - AluJo SINE Alu 0 307 7 1128 300 102 44 chr2 10864543 10865229 -242391354 - L1ME3A LINE L1 -1685 4485 3840 3074 234 47 21 chr2 10865664 10866412 -242390171 + L1M4 LINE L1 8 774 -5768 2929 185 80 7 chr2 10866409 10867021 -242389562 + L1MB7 LINE L1 5383 6039 -145 * 3753 106 34 5 chr2 10867055 10867611 -242388972 - L1PB3 LINE L1 0 6154 5583 1229 204 4 13 chr2 10867613 10867838 -242388745 + AluJb SINE Alu 1 223 -89 765 87 8 16 chr2 10867923 10868049 -242388534 + (GAAA)n Simple_repeat Simple_repeat 2 126 0 14722 206 9 12 chr2 10868049 10871870 -242384713 - L1PB3 LINE L1 -562 5592 1711 580 204 53 0 chr2 10871877 10872009 -242384574 + L1MB8 LINE L1 6028 6166 -12 257 333 12 0 chr2 10872887 10872968 -242383615 - HAL1 LINE L1 -2422 85 4 235 204 0 0 chr2 10874711 10874760 -242381823 + L1MD3 LINE L1 6726 6774 -1221 1175 170 185 122 chr2 10874764 10875001 -242381582 + L1MC3 LINE L1 6846 7067 -718 268 234 31 0 chr2 10875001 10875065 -242381518 + MLT1F1 LTR MaLR 44 109 -458 1175 170 185 122 chr2 10875065 10875363 -242381220 + L1MC3 LINE L1 7067 7482 -303 747 135 18 0 chr2 10875353 10875464 -242381119 + L1M3 LINE L1 5567 5679 -501 * 233 320 122 18 chr2 10876000 10876222 -242380361 - MIR SINE MIR -6 256 12 2317 143 64 7 chr2 10877122 10877527 -242379056 + MSTA LTR MaLR 1 428 0 3529 156 0 0 chr2 10877798 10878325 -242378258 - MER1A DNA MER1_type 0 527 1 253 263 202 0 chr2 10878469 10878568 -242378015 - MIR SINE MIR -92 170 52 2083 215 25 19 chr2 10878586 10879077 -242377506 + L1MD2 LINE L1 5859 6357 -2 1919 138 7 3 chr2 10879197 10879486 -242377097 - AluJb SINE Alu -22 290 1 985 135 0 0 chr2 10879972 10880105 -242376478 + AluSx SINE Alu 1 133 -180 301 211 0 84 chr2 10880123 10880218 -242376365 - L1MC4 LINE L1 -1339 6703 6617 328 216 0 14 chr2 10880219 10880293 -242376290 - L1MC4 LINE L1 -1334 6708 6636 1143 127 0 0 chr2 10880298 10880456 -242376127 + AluSx SINE Alu 134 291 -19 210 250 0 0 chr2 10880485 10880541 -242376042 + (TATG)n Simple_repeat Simple_repeat 2 57 0 269 358 113 26 chr2 10880604 10880833 -242375750 + MIR SINE MIR 12 260 -2 331 285 84 45 chr2 10880922 10881101 -242375482 + MIR SINE MIR 6 191 -71 502 240 6 22 chr2 10881520 10881703 -242374880 + (TG)n Simple_repeat Simple_repeat 1 180 0 323 345 35 22 chr2 10882229 10882461 -242374122 + L1 LINE L1 3588 3822 -2324 414 39 0 0 chr2 10883801 10883853 -242372730 + (CA)n Simple_repeat Simple_repeat 1 52 0 261 163 0 0 chr2 10883881 10883930 -242372653 + (TG)n Simple_repeat Simple_repeat 2 50 0 1804 118 8 0 chr2 10884032 10884277 -242372306 + AluSx SINE Alu 1 247 -65 237 280 100 25 chr2 10884507 10884707 -242371876 - L2 LINE L2 -244 3028 2814 216 285 16 32 chr2 10885292 10885415 -242371168 - MIR3 SINE MIR -6 202 82 2309 119 0 0 chr2 10885457 10885760 -242370823 + AluSx SINE Alu 1 303 -9 2385 99 0 0 chr2 10886035 10886338 -242370245 + AluSg SINE Alu 1 303 -7 267 312 63 13 chr2 10886355 10886577 -242370006 - MLT1L LTR MaLR -138 477 168 652 255 82 32 chr2 10887818 10888389 -242368194 + MER115 DNA AcHobo 35 693 0 2329 109 0 0 chr2 10888993 10889295 -242367288 + AluSx SINE Alu 1 302 -10 240 357 39 10 chr2 10889375 10889576 -242367007 - MIR SINE MIR -25 237 30 348 292 9 0 chr2 10890807 10890920 -242365663 + L1MC4a LINE L1 2705 2818 -3328 278 285 82 40 chr2 10890968 10891285 -242365298 - LTR16A LTR ERVL 0 450 43 2210 268 89 23 chr2 10891364 10892861 -242363722 + L1MC4a LINE L1 4456 5399 -747 761 210 37 1 chr2 10893314 10893506 -242363077 + L1MC5 LINE L1 6637 6804 -1157 * 2673 152 21 6 chr2 10893501 10894027 -242362556 + L1M4c LINE L1 806 1339 -5045 1086 155 38 25 chr2 10894025 10894264 -242362319 + L1M4c LINE L1 2029 2270 -4114 * 5210 246 40 32 chr2 10894232 10895071 -242361512 - L1M4 LINE L1 -1265 4881 4050 6269 82 18 0 chr2 10895071 10896515 -242360068 + L1PA10 LINE L1 4731 6163 -5 5210 246 40 32 chr2 10896515 10897278 -242359305 - L1M4 LINE L1 -2096 4050 3260 1143 127 41 0 chr2 10897278 10897498 -242359085 - L1MA8 LINE L1 -5 6286 6058 5210 246 40 32 chr2 10897498 10897811 -242358772 - L1M4 LINE L1 -2886 3260 2951 308 282 53 23 chr2 10897989 10898120 -242358463 - L1M4 LINE L1 -3539 2607 2473 763 208 45 0 chr2 10898189 10898343 -242358240 - MLT1E1 LTR MaLR -23 631 471 297 68 45 0 chr2 10898336 10898380 -242358203 - MLT1E1 LTR MaLR -607 47 2 * 366 160 70 60 chr2 10898383 10898483 -242358100 - LTR16C LTR ERVL -28 463 363 308 319 113 6 chr2 10898694 10898854 -242357729 + MIR3 SINE MIR 29 205 -3 3748 30 0 8 chr2 10899475 10899945 -242356638 - L1PA4 LINE L1 0 6155 5690 422 330 89 15 chr2 10899945 10900351 -242356232 + LTR16B LTR ERVL 13 448 -16 254 384 32 0 chr2 10900368 10900493 -242356090 + HERV16 LTR ERVL 3 131 -4865 1938 304 90 59 chr2 10900674 10901112 -242355471 + HERV16 LTR ERVL 495 918 -4078 1292 196 166 16 chr2 10901112 10901545 -242355038 - LTR54B LTR ERV1 0 498 1 1938 304 90 59 chr2 10901545 10902710 -242353873 + HERV16 LTR ERVL 918 2149 -2847 198 0 0 0 chr2 10903709 10903731 -242352852 + (T)n Simple_repeat Simple_repeat 1 22 0 385 41 0 0 chr2 10903731 10903780 -242352803 - LTR17 LTR ERV1 -456 324 276 22 36 0 55 chr2 10904187 10904242 -242352341 + GC_rich Low_complexity Low_complexity 1 52 0 229 200 18 0 chr2 10904391 10904446 -242352137 + (CGG)n Simple_repeat Simple_repeat 1 56 0 296 162 321 23 chr2 10906591 10906720 -242349863 - MIR SINE MIR -62 146 18 377 281 175 6 chr2 10907047 10907207 -242349376 + MIR SINE MIR 73 259 -3 210 299 155 0 chr2 10907511 10907608 -242348975 + MIR3 SINE MIR 89 200 -8 542 190 0 66 chr2 10908517 10908638 -242347945 + MER5B DNA MER1_type 6 118 -60 463 116 0 0 chr2 10908641 10908710 -242347873 - AluJ/FRAM SINE Alu -14 298 230 506 243 169 0 chr2 10908711 10908859 -242347724 - MER5A DNA MER1_type -7 182 10 795 209 28 11 chr2 10908876 10909053 -242347530 + MER58 DNA MER1_type 3 182 -159 317 355 8 16 chr2 10909075 10909199 -242347384 - L2 LINE L2 -232 3040 2918 189 0 0 0 chr2 10909761 10909782 -242346801 + (TG)n Simple_repeat Simple_repeat 2 22 0 411 316 35 6 chr2 10909815 10909986 -242346597 - MIR SINE MIR -39 223 48 264 149 0 0 chr2 10912732 10912779 -242343804 + (TG)n Simple_repeat Simple_repeat 1 47 0 271 315 46 9 chr2 10913263 10913371 -242343212 + L2 LINE L2 3197 3308 -5 297 280 21 11 chr2 10915625 10915718 -242340865 - L2 LINE L2 -17 3296 3203 260 258 0 0 chr2 10916853 10916919 -242339664 + L2 LINE L2 3026 3091 -181 982 172 18 57 chr2 10918014 10918241 -242338342 - MER20 DNA MER1_type 0 219 2 233 299 25 11 chr2 10918453 10918552 -242338031 - MIR SINE MIR -63 145 50 1582 193 70 10 chr2 10918562 10918945 -242337638 + L1MB8 LINE L1 5771 6176 -2 192 125 0 0 chr2 10918945 10918977 -242337606 + (CA)n Simple_repeat Simple_repeat 1 32 0 558 232 26 57 chr2 10919121 10919315 -242337268 - MER5A DNA MER1_type -1 188 1 917 173 19 0 chr2 10919395 10919551 -242337032 + FRAM SINE Alu 1 159 -7 475 331 7 47 chr2 10919694 10919777 -242336806 - L1M4 LINE L1 -2149 3997 3912 2280 120 0 0 chr2 10919777 10920078 -242336505 - AluSx SINE Alu -1 311 11 475 331 7 47 chr2 10920078 10920417 -242336166 - L1M4 LINE L1 -2234 3912 3592 459 310 142 46 chr2 10920444 10920940 -242335643 + L2 LINE L2 2773 3312 -1 225 207 0 0 chr2 10921312 10921370 -242335213 - HAL1 LINE L1 -341 2166 2109 370 302 172 41 chr2 10921581 10922362 -242334221 - HAL1 LINE L1 -593 1914 1032 306 251 113 5 chr2 10922625 10922747 -242333836 + MIR SINE MIR 73 208 -54 279 93 0 0 chr2 10923451 10923494 -242333089 + L2 LINE L2 3270 3312 -1 309 197 0 0 chr2 10925131 10925207 -242331376 + (TG)n Simple_repeat Simple_repeat 1 76 0 1767 221 37 16 chr2 10925599 10926034 -242330549 - L1MB5 LINE L1 0 6174 5731 180 254 68 17 chr2 10927139 10927198 -242329385 + L2 LINE L2 3210 3271 -1 368 277 154 10 chr2 10927954 10928149 -242328434 + MER2 DNA MER2_type 123 345 0 378 363 12 0 chr2 10928171 10928339 -242328244 + (TGAG)n Simple_repeat Simple_repeat 2 171 0 327 186 29 14 chr2 10928789 10928859 -242327724 + MIR SINE MIR 80 150 -112 203 314 102 0 chr2 10929082 10929200 -242327383 - L2 LINE L2 -1 3271 3142 2235 115 118 10 chr2 10929361 10929744 -242326839 - MSTA LTR MaLR -4 424 1 7893 161 47 37 chr2 10929744 10931307 -242325276 - MSTA-int LTR MaLR 0 1580 3 1854 147 155 11 chr2 10931309 10931683 -242324900 - MSTA LTR MaLR 0 428 1 3376 195 15 9 chr2 10931927 10932594 -242323989 + LTR51 LTR ERV1 1 671 0 334 299 190 11 chr2 10932624 10932798 -242323785 - MIR SINE MIR -57 205 1 2041 135 0 10 chr2 10933824 10934120 -242322463 - AluSp SINE Alu -20 293 1 387 0 0 0 chr2 10934894 10934937 -242321646 + (CA)n Simple_repeat Simple_repeat 1 43 0 224 321 83 0 chr2 10934953 10935062 -242321521 - L2 LINE L2 0 3272 3155 216 299 15 0 chr2 10935286 10935353 -242321230 + L2 LINE L2 3205 3272 0 3431 52 4 4 chr2 10937194 10937651 -242318932 - L1PA7 LINE L1 0 6154 5698 362 244 41 57 chr2 10937810 10937876 -242318707 - MIR SINE MIR -36 226 161 2049 187 65 9 chr2 10937876 10938336 -242318247 - MER66B LTR ERV1 0 486 1 362 244 41 57 chr2 10938336 10938392 -242318191 - MIR SINE MIR -101 161 106 273 252 111 37 chr2 10939317 10939452 -242317131 - HAL1b LINE L1 -10 1338 1194 224 323 79 16 chr2 10941332 10941459 -242315124 - MIR3 SINE MIR -61 147 13 719 183 7 0 chr2 10941902 10942198 -242314385 + (TGGA)n Simple_repeat Simple_repeat 1 298 0 1650 127 77 82 chr2 10942249 10942584 -242313999 + THE1C LTR MaLR 1 335 -40 2219 88 21 0 chr2 10942584 10942766 -242313817 - AluY SINE Alu 0 311 119 297 0 0 0 chr2 10942766 10942799 -242313784 + (TG)n Simple_repeat Simple_repeat 2 34 0 2219 88 21 0 chr2 10942799 10942901 -242313682 - AluY SINE Alu -192 119 21 1650 127 77 82 chr2 10942901 10942942 -242313641 + THE1C LTR MaLR 335 375 0 205 306 18 81 chr2 10943909 10944020 -242312563 - MIR SINE MIR -87 121 18 258 189 0 0 chr2 10944701 10944754 -242311829 - MIR SINE MIR -86 122 70 219 272 29 68 chr2 10945042 10945145 -242311438 - MIR SINE MIR -52 210 112 807 43 17 77 chr2 10945868 10945985 -242310598 + LTR17 LTR ERV1 183 292 -488 438 194 65 24 chr2 10946138 10946262 -242310321 + L1MC4 LINE L1 6447 6575 -1467 1458 171 79 11 chr2 10946267 10946579 -242310004 + MER61B LTR ERV1 1 425 0 409 126 69 58 chr2 10946632 10946806 -242309777 + (TAGA)n Simple_repeat Simple_repeat 3 178 0 757 208 10 78 chr2 10946825 10947017 -242309566 + L1MC4a LINE L1 6600 6778 -1030 4095 132 7 65 chr2 10947334 10948068 -242308515 - LTR8 LTR ERV1 0 691 1 231 125 0 0 chr2 10948384 10948424 -242308159 + (CA)n Simple_repeat Simple_repeat 1 40 0 248 250 45 34 chr2 10948470 10948558 -242308025 - L1MC/D LINE L1 -1893 5915 5827 330 261 74 1 chr2 10949560 10949744 -242306839 + LTR16A1 LTR ERVL 190 418 -39 1850 129 10 10 chr2 10949744 10950039 -242306544 + AluJo SINE Alu 1 295 -17 330 261 74 1 chr2 10950039 10950080 -242306503 + LTR16A1 LTR ERVL 418 455 -2 1223 275 72 27 chr2 10950362 10950849 -242305734 + MLT1J LTR MaLR 1 509 -2 2286 58 54 0 chr2 10951907 10952202 -242304381 - AluY SINE Alu 0 311 1 203 296 102 45 chr2 10952457 10952633 -242303950 + MIR3 SINE MIR 13 198 -10 1686 219 21 5 chr2 10953184 10953559 -242303024 + L1MB4 LINE L1 5778 6158 -22 2362 51 0 32 chr2 10953561 10953875 -242302708 - AluY SINE Alu -7 304 1 2065 106 3 0 chr2 10954727 10955111 -242301472 + AluSx SINE Alu 1 385 0 239 167 0 24 chr2 10955624 10955666 -242300917 - L2 LINE L2 -19 3294 3254 289 206 46 15 chr2 10956010 10956141 -242300442 + CT-rich Low_complexity Low_complexity 4 138 0 2100 96 0 0 chr2 10956141 10956421 -242300162 - AluSx SINE Alu -32 280 1 249 215 15 62 chr2 10956469 10956534 -242300049 - MIR SINE MIR -149 113 52 1919 130 7 3 chr2 10956853 10957153 -242299430 - AluSx SINE Alu -11 301 1 2091 126 0 0 chr2 10957327 10957629 -242298954 + AluSx SINE Alu 5 306 -6 819 215 136 68 chr2 10957787 10958114 -242298469 + MLT2D LTR ERVL 7 310 -104 327 49 0 0 chr2 10958114 10958155 -242298428 + (TC)n Simple_repeat Simple_repeat 2 42 0 420 20 0 0 chr2 10958158 10958207 -242298376 + (TG)n Simple_repeat Simple_repeat 2 50 0 819 215 136 68 chr2 10958207 10958257 -242298326 + MLT2D LTR ERVL 311 414 0 250 362 24 16 chr2 10958650 10958777 -242297806 + L2 LINE L2 3172 3299 -14 1922 121 3 10 chr2 10958957 10959263 -242297320 + AluSx SINE Alu 1 304 -8 1584 163 74 41 chr2 10959294 10959657 -242296926 - THE1C LTR MaLR 0 375 1 1150 140 6 0 chr2 10959958 10960136 -242296447 - FRAM SINE Alu 0 176 1 2094 123 7 0 chr2 10961411 10961744 -242294839 - AluSx SINE Alu 0 335 1 330 326 71 24 chr2 10961748 10962294 -242294289 - L1M4 LINE L1 -3334 2812 2241 2062 116 0 0 chr2 10962323 10962627 -242293956 - AluSx SINE Alu 0 304 1 2724 194 17 3 chr2 10962884 10963472 -242293111 + L1MB7 LINE L1 4103 4698 -1448 2213 107 3 0 chr2 10963824 10964134 -242292449 + AluY SINE Alu 1 311 0 311 220 59 25 chr2 10964230 10964348 -242292235 - MER65B LTR ERV1 -409 122 1 3087 198 30 16 chr2 10964348 10965577 -242291006 + L1MB7 LINE L1 4697 5952 -169 274 98 98 6 chr2 10965584 10965747 -242290836 + (TA)n Simple_repeat Simple_repeat 2 179 0 * 302 107 54 42 chr2 10965737 10965905 -242290678 + (TTATA)n Simple_repeat Simple_repeat 5 174 0 225 181 11 53 chr2 10965905 10965999 -242290584 + (TTAA)n Simple_repeat Simple_repeat 4 93 0 248 98 98 18 chr2 10966000 10966163 -242290420 + (TA)n Simple_repeat Simple_repeat 2 177 0 409 171 47 0 chr2 10966202 10966372 -242290211 + (TATAA)n Simple_repeat Simple_repeat 2 179 0 409 171 47 0 chr2 10966392 10966562 -242290021 + (TATAA)n Simple_repeat Simple_repeat 2 179 0 351 173 43 0 chr2 10966575 10966714 -242289869 + (TATAA)n Simple_repeat Simple_repeat 5 149 0 448 162 48 0 chr2 10966725 10966892 -242289691 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 563 106 28 50 chr2 10966905 10967084 -242289499 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 22 0 0 0 chr2 10967084 10967106 -242289477 + AT_rich Low_complexity Low_complexity 1 22 0 1892 107 24 37 chr2 10967107 10967405 -242289178 - AluSx SINE Alu -18 294 1 1101 184 27 93 chr2 10967408 10967740 -242288843 + L1MB7 LINE L1 5853 6162 -22 180 0 0 0 chr2 10968107 10968127 -242288456 + (A)n Simple_repeat Simple_repeat 1 20 0 334 335 68 27 chr2 10969503 10969766 -242286817 - MLT1L LTR MaLR -171 444 171 212 346 25 0 chr2 10970060 10970141 -242286442 + L2 LINE L2 3104 3186 -86 1257 239 101 47 chr2 10970200 10970740 -242285843 - L2 LINE L2 -21 3292 2709 686 122 19 0 chr2 10970743 10970850 -242285733 - AluSg/x SINE Alu -5 304 196 225 297 14 0 chr2 10970950 10971024 -242285559 - L1MC4 LINE L1 -630 7412 7338 423 206 112 158 chr2 10971044 10971171 -242285412 - L1MC4 LINE L1 -796 7246 7115 2268 83 7 0 chr2 10971171 10971472 -242285111 + AluSq SINE Alu 1 303 -10 423 206 112 158 chr2 10971472 10971756 -242284827 - L1MC4 LINE L1 -927 7115 6854 2236 87 3 7 chr2 10971788 10972087 -242284496 + AluSp SINE Alu 1 298 -15 247 283 76 11 chr2 10972981 10973073 -242283510 + L2 LINE L2 3216 3313 0 1425 181 71 0 chr2 10973102 10973234 -242283349 + AluJo SINE Alu 1 122 -190 2024 94 7 7 chr2 10973234 10973541 -242283042 + AluSp SINE Alu 1 313 0 1425 181 71 0 chr2 10973541 10973689 -242282894 + AluJo SINE Alu 122 301 -11 264 88 53 0 chr2 10974625 10974682 -242281901 + CT-rich Low_complexity Low_complexity 1 60 0 278 293 40 0 chr2 10974682 10974757 -242281826 - L2 LINE L2 -1 3312 3235 1133 179 0 0 chr2 10975144 10975345 -242281238 - L1M3 LINE L1 -1002 5144 4944 2104 157 46 14 chr2 10975353 10975863 -242280720 + L1M3 LINE L1 5157 5685 -483 252 275 22 33 chr2 10976671 10976762 -242279821 - MIR3 SINE MIR -15 193 104 264 289 132 8 chr2 10976764 10976885 -242279698 + MIR SINE MIR 23 158 -104 2060 133 0 0 chr2 10977806 10978107 -242278476 + AluSx SINE Alu 1 301 -11 441 54 0 0 chr2 10978165 10978221 -242278362 + (TGGGGG)n Simple_repeat Simple_repeat 1 56 0 428 230 151 7 chr2 10978260 10978398 -242278185 + MIR SINE MIR 7 164 -98 767 196 10 85 chr2 10978398 10978514 -242278069 + MER5A DNA MER1_type 1 97 -92 648 216 132 0 chr2 10978514 10978681 -242277902 - MER53 DNA DNA 0 189 1 767 196 10 85 chr2 10978681 10978763 -242277820 + MER5A DNA MER1_type 97 184 -5 199 281 31 0 chr2 10980009 10980073 -242276510 + MIR SINE MIR 43 108 -100 1142 115 4 9 chr2 10980264 10980489 -242276094 + (GGAA)n Simple_repeat Simple_repeat 2 225 0 973 144 6 6 chr2 10980494 10980674 -242275909 + GA-rich Low_complexity Low_complexity 1 180 0 760 104 0 43 chr2 10980823 10981105 -242275478 + (TTCC)n Simple_repeat Simple_repeat 1 269 0 349 309 71 18 chr2 10981205 10981373 -242275210 - L3 LINE CR1 -241 1336 1160 886 53 0 0 chr2 10982034 10982148 -242274435 - AluY SINE Alu -11 300 187 468 279 111 38 chr2 10982148 10982425 -242274158 - L1MEc LINE L1 -3670 2545 2281 367 242 43 93 chr2 10982577 10982614 -242273969 - L1MC/D LINE L1 -2027 5781 5744 2282 80 3 7 chr2 10982614 10982916 -242273667 - AluSq SINE Alu -12 301 1 367 242 43 93 chr2 10982916 10983039 -242273544 - L1MC/D LINE L1 -2064 5744 5629 981 248 65 35 chr2 10983054 10983413 -242273170 + MLT1G3 LTR MaLR 1 336 -194 2368 205 69 0 chr2 10983477 10983969 -242272614 + MER68 LTR ERV1 36 561 -1 328 282 118 35 chr2 10984078 10984248 -242272335 + L1ME LINE L1 5604 5787 -334 836 136 30 8 chr2 10984292 10984424 -242272159 + FRAM SINE Alu 18 152 -24 1923 128 4 0 chr2 10984485 10984793 -242271790 + AluSx SINE Alu 1 309 0 256 185 46 0 chr2 10985598 10985663 -242270920 - MIR SINE MIR -108 100 33 332 197 39 110 chr2 10985838 10985965 -242270618 - L1MC4 LINE L1 -1 8041 7924 22 35 0 0 chr2 10986006 10986035 -242270548 + AT_rich Low_complexity Low_complexity 1 29 0 2201 102 0 10 chr2 10986044 10986348 -242270235 + AluSx SINE Alu 1 301 -11 1030 184 71 20 chr2 10986884 10987080 -242269503 + MIR SINE MIR 1 206 -56 238 269 84 50 chr2 10987176 10987295 -242269288 + MIR SINE MIR 22 144 -64 506 259 108 59 chr2 10987424 10987710 -242268873 - MLT1J2 LTR MaLR -114 336 37 1011 253 58 49 chr2 10987806 10987850 -242268733 + MLT1D LTR MaLR 158 200 -305 1525 188 0 45 chr2 10987850 10987978 -242268605 + AluJo SINE Alu 19 151 -161 2029 125 3 3 chr2 10987978 10988281 -242268302 + AluSp SINE Alu 1 303 -10 1525 188 0 45 chr2 10988281 10988460 -242268123 + AluJo SINE Alu 151 312 0 1011 253 58 49 chr2 10988460 10988743 -242267840 + MLT1D LTR MaLR 200 488 -17 345 254 114 0 chr2 10988768 10988882 -242267701 - MIR SINE MIR -127 135 9 1260 226 59 98 chr2 10989696 10990219 -242266364 - L1ME3A LINE L1 -4 6166 5664 1693 138 62 7 chr2 10990259 10990549 -242266034 + AluJb SINE Alu 1 306 -6 2374 82 0 0 chr2 10990975 10991279 -242265304 - AluSp SINE Alu -9 304 1 689 149 79 0 chr2 10991447 10991561 -242265022 - FLAM_C SINE Alu -19 124 2 1150 140 6 0 chr2 10992279 10992457 -242264126 + FRAM SINE Alu 1 176 0 1584 163 74 41 chr2 10992758 10993121 -242263462 + THE1C LTR MaLR 1 375 0 1858 142 7 3 chr2 10993152 10993455 -242263128 - AluSx SINE Alu -8 304 1 264 77 0 0 chr2 10993482 10993521 -242263062 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 191 114 29 0 chr2 10993524 10993559 -242263024 + A-rich Low_complexity Low_complexity 2 37 0 454 286 106 12 chr2 10993683 10993844 -242262739 + MIR SINE MIR 80 255 -7 334 341 23 15 chr2 10994627 10994759 -242261824 + MIR SINE MIR 78 210 -52 249 209 60 30 chr2 10995309 10995376 -242261207 - L2 LINE L2 -58 3255 3187 255 317 72 6 chr2 10997935 10998102 -242258481 - LTR16A LTR ERVL -152 298 121 363 181 14 0 chr2 10998951 10999023 -242257560 - MLT1J2 LTR MaLR -394 73 1 * 622 242 121 26 chr2 10999023 10999294 -242257289 + LTR16A LTR ERVL 154 450 0 2245 97 10 0 chr2 11000648 11000947 -242255636 + AluSx SINE Alu 1 302 -10 1402 161 47 67 chr2 11001023 11001322 -242255261 + AluJo SINE Alu 1 293 -19 2078 117 10 0 chr2 11001388 11001679 -242254904 - AluSg SINE Alu -16 294 1 212 237 0 0 chr2 11001878 11001916 -242254667 + polypurine Low_complexity Low_complexity 3 40 0 464 304 25 0 chr2 11002208 11002369 -242254214 + L1MEd LINE L1 4 168 -5951 1396 282 74 11 chr2 11002380 11002827 -242253756 + L1MEd LINE L1 206 680 -5439 2104 129 0 7 chr2 11002852 11003161 -242253422 + AluSx SINE Alu 1 307 -5 571 197 19 163 chr2 11003163 11003217 -242253366 - MIR SINE MIR -10 252 192 2182 117 3 0 chr2 11003217 11003526 -242253057 + AluSq SINE Alu 1 310 -3 571 197 19 163 chr2 11003526 11003735 -242252848 - MIR SINE MIR -70 192 27 233 270 24 75 chr2 11003778 11003937 -242252646 + L1MEd LINE L1 780 915 -5204 1129 158 6 0 chr2 11003937 11004108 -242252475 + FAM SINE Alu 1 172 -3 233 270 24 75 chr2 11004108 11004281 -242252302 + L1MEd LINE L1 915 1095 -5024 2322 97 0 0 chr2 11004282 11004590 -242251993 + AluSc SINE Alu 1 308 -1 270 304 59 59 chr2 11004673 11005117 -242251466 + L1MEd LINE L1 1231 1674 -4455 2194 108 7 0 chr2 11005406 11005711 -242250872 + AluSx SINE Alu 1 307 -5 262 375 155 0 chr2 11005733 11005901 -242250682 - L2 LINE L2 -464 2850 2657 193 274 0 0 chr2 11006177 11006228 -242250355 + L2 LINE L2 3262 3312 -1 297 345 96 10 chr2 11007296 11007493 -242249090 + MIR SINE MIR 20 233 -29 2299 94 0 3 chr2 11007817 11008124 -242248459 - AluSq SINE Alu -7 306 1 2933 54 6 0 chr2 11008124 11008475 -242248108 - THE1A LTR MaLR -2 353 1 300 285 15 85 chr2 11008536 11008599 -242247984 + MIR SINE MIR 102 153 -109 1433 217 64 87 chr2 11008599 11009128 -242247455 - MLT2B1 LTR ERVL 0 520 4 300 285 15 85 chr2 11009128 11009194 -242247389 + MIR SINE MIR 153 222 -40 1769 167 3 10 chr2 11009346 11009652 -242246931 + AluJo SINE Alu 1 304 -8 2200 109 3 0 chr2 11009652 11009954 -242246629 + AluSx SINE Alu 1 303 -9 227 308 185 0 chr2 11010778 11010908 -242245675 - L3 LINE CR1 -2 1575 1422 464 273 116 12 chr2 11011101 11011273 -242245310 + MIR SINE MIR 28 217 -45 3966 97 39 2 chr2 11011926 11012460 -242244123 - MER41A LTR ERV1 0 554 1 293 210 86 25 chr2 11012952 11013033 -242243550 - MIR SINE MIR 0 262 177 404 247 78 48 chr2 11015113 11015279 -242241304 + MIR SINE MIR 21 191 -71 1901 134 0 20 chr2 11015315 11015614 -242240969 - AluSx SINE Alu -19 293 1 2455 192 22 2 chr2 11015672 11016130 -242240453 + MLT1C LTR MaLR 1 467 0 1611 164 24 7 chr2 11016196 11016488 -242240095 + AluJo SINE Alu 1 297 -15 261 246 0 15 chr2 11016491 11016556 -242240027 - MIR SINE MIR -124 84 21 1571 167 4 4 chr2 11016597 11016854 -242239729 + AluJo SINE Alu 1 257 -55 355 219 41 82 chr2 11017875 11018021 -242238562 + MIR3 SINE MIR 15 154 -54 405 0 0 0 chr2 11018462 11018507 -242238076 + (CA)n Simple_repeat Simple_repeat 1 45 0 322 309 110 21 chr2 11019617 11019881 -242236702 - L2 LINE L2 -264 3049 2687 2553 188 87 18 chr2 11019883 11020269 -242236314 - L1MB1 LINE L1 -101 6067 5624 2208 155 106 8 chr2 11020269 11020469 -242236114 - MSTB LTR MaLR 0 426 247 186 71 0 0 chr2 11020469 11020497 -242236086 + (CAGAGA)n Simple_repeat Simple_repeat 2 29 0 2208 155 106 8 chr2 11020497 11020683 -242235900 - MSTB LTR MaLR -179 247 2 2553 188 87 18 chr2 11020683 11020893 -242235690 - L1MB1 LINE L1 -544 5624 5430 1443 115 0 0 chr2 11020893 11021113 -242235470 - AluSg/x SINE Alu 0 301 82 805 170 11 99 chr2 11021123 11021305 -242235278 - FRAM SINE Alu 0 166 1 1572 178 79 4 chr2 11021305 11021759 -242234824 - L1MB1 LINE L1 -727 5441 4933 446 141 0 0 chr2 11021757 11021835 -242234748 + L1 LINE L1 5159 5236 -910 * 237 324 59 10 chr2 11021909 11022011 -242234572 - L2 LINE L2 -939 2375 2269 919 158 30 0 chr2 11022075 11022239 -242234344 + L1MB7 LINE L1 5997 6165 -19 349 205 12 12 chr2 11022471 11022554 -242234029 - Charlie5 DNA MER1_type -27 2585 2503 2169 120 0 3 chr2 11022554 11022862 -242233721 + AluSx SINE Alu 1 307 -5 310 301 118 16 chr2 11022934 11023120 -242233463 + L1MEd LINE L1 1022 1226 -4893 * 1098 269 108 61 chr2 11023116 11023297 -242233286 + HAL1 LINE L1 1692 1863 -644 2448 62 3 0 chr2 11023297 11023606 -242232977 - AluY SINE Alu 0 311 2 1098 269 108 61 chr2 11023606 11024006 -242232577 + HAL1 LINE L1 1863 2320 -187 2751 106 21 35 chr2 11024006 11024371 -242232212 + MSTA LTR MaLR 2 362 -66 2303 93 0 0 chr2 11024371 11024681 -242231902 - AluSx SINE Alu -2 310 1 2751 106 21 35 chr2 11024681 11024748 -242231835 + MSTA LTR MaLR 362 428 0 1098 269 108 61 chr2 11024748 11024930 -242231653 + HAL1 LINE L1 2320 2492 -15 2224 116 0 0 chr2 11025268 11025569 -242231014 + AluSx SINE Alu 1 301 -11 2234 67 7 17 chr2 11025569 11025867 -242230716 + AluY SINE Alu 1 295 -16 2027 139 0 0 chr2 11026427 11026728 -242229855 - AluSx SINE Alu -11 301 1 418 277 80 0 chr2 11026834 11026971 -242229612 - L2 LINE L2 0 3313 3166 * 452 279 90 5 chr2 11026967 11027168 -242229415 + L2 LINE L2 1876 2093 -1221 1045 263 71 48 chr2 11027168 11027399 -242229184 + L2 LINE L2 2245 2492 -822 2302 98 3 0 chr2 11027399 11027705 -242228878 - AluSc SINE Alu -2 307 1 1045 263 71 48 chr2 11027705 11027911 -242228672 + L2 LINE L2 2492 2692 -622 2161 101 0 7 chr2 11028162 11028458 -242228125 - AluSg SINE Alu -16 294 1 298 120 0 0 chr2 11028747 11028797 -242227786 + Alu SINE Alu 249 298 -4 1925 82 86 0 chr2 11028837 11029105 -242227478 - AluSq SINE Alu -16 297 7 335 283 88 2 chr2 11029649 11029787 -242226796 + MIR SINE MIR 36 182 -61 3113 172 27 98 chr2 11030267 11030850 -242225733 + LTR8 LTR ERV1 1 521 -170 1924 107 7 14 chr2 11030850 11031130 -242225453 + AluSx SINE Alu 5 284 -28 207 0 0 0 chr2 11031130 11031153 -242225430 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 3113 172 27 98 chr2 11031161 11031321 -242225262 + LTR8 LTR ERV1 521 691 0 4016 78 73 84 chr2 11031435 11032105 -242224478 - MER4A LTR ERV1 -1 663 1 2252 91 3 0 chr2 11032150 11032448 -242224135 + AluSx SINE Alu 3 301 -11 2024 113 23 7 chr2 11032541 11032841 -242223742 + AluSg SINE Alu 1 305 -5 274 181 38 114 chr2 11032984 11033029 -242223554 - L1MC4 LINE L1 -433 7609 7562 1618 184 0 46 chr2 11033029 11033355 -242223228 - AluJb SINE Alu 0 312 2 274 181 38 114 chr2 11033355 11033414 -242223169 - L1MC4 LINE L1 -480 7562 7513 210 139 28 46 chr2 11033520 11033628 -242222955 + (CGGGG)n Simple_repeat Simple_repeat 2 107 0 266 96 19 58 chr2 11034259 11034311 -242222272 + MIR3 SINE MIR 108 157 -51 1026 129 165 52 chr2 11034321 11034593 -242221990 - LTR48 LTR ERV1 -484 303 1 1991 99 12 46 chr2 11036427 11036572 -242220011 + AluSx SINE Alu 1 149 -163 2382 61 0 0 chr2 11036572 11036865 -242219718 + AluY SINE Alu 1 293 -18 1991 99 12 46 chr2 11036865 11037042 -242219541 + AluSx SINE Alu 149 312 0 225 289 0 62 chr2 11037200 11037297 -242219286 + MIR3 SINE MIR 111 201 -7 180 0 0 0 chr2 11038991 11039011 -242217572 + (A)n Simple_repeat Simple_repeat 1 20 0 1157 126 8 89 chr2 11039454 11039700 -242216883 - AluJo SINE Alu 0 312 87 1632 194 0 7 chr2 11039716 11040010 -242216573 - AluJo SINE Alu -20 292 1 220 269 134 0 chr2 11040241 11040308 -242216275 + MIR SINE MIR 113 188 -74 1176 93 11 6 chr2 11040783 11040995 -242215588 - AluY SINE Alu 0 312 100 2203 64 4 0 chr2 11041250 11041561 -242215022 - AluY SINE Alu 0 312 1 874 217 0 38 chr2 11041613 11041797 -242214786 + AluJo SINE Alu 2 178 -134 443 158 0 0 chr2 11041798 11041874 -242214709 - MER53 DNA DNA -113 76 1 275 292 4 17 chr2 11042124 11042262 -242214321 - MIR SINE MIR -43 219 85 186 71 0 0 chr2 11042974 11043002 -242213581 + (TA)n Simple_repeat Simple_repeat 2 29 0 2063 84 0 119 chr2 11043002 11043191 -242213392 - AluSp SINE Alu -8 295 85 9741 41 8 103 chr2 11043191 11044665 -242211918 - SVA Other Other 0 1386 53 180 0 0 0 chr2 11044665 11044685 -242211898 + (GGGAGA)n Simple_repeat Simple_repeat 3 22 0 2063 84 0 119 chr2 11044685 11044829 -242211754 - AluSp SINE Alu -216 87 1 560 168 0 99 chr2 11045211 11045269 -242211314 - MER53 DNA DNA -44 145 83 1978 108 3 17 chr2 11045269 11045565 -242211018 + AluSx SINE Alu 6 297 -15 560 168 0 99 chr2 11045565 11045667 -242210916 - MER53 DNA DNA -106 83 1 2236 100 7 0 chr2 11045822 11046121 -242210462 + AluSx SINE Alu 5 305 -7 2300 70 7 17 chr2 11046654 11046952 -242209631 + AluY SINE Alu 1 295 -16 322 331 0 0 chr2 11047656 11047813 -242208770 + C-rich Low_complexity Low_complexity 1 157 0 2396 70 0 7 chr2 11048202 11048500 -242208083 - AluY SINE Alu -15 296 1 1244 148 148 61 chr2 11049359 11049509 -242207074 - AluJo SINE Alu -11 301 165 2353 84 0 0 chr2 11049509 11049795 -242206788 - AluSx SINE Alu -26 286 1 1244 148 148 61 chr2 11049795 11049921 -242206662 - AluJo SINE Alu -147 165 1 432 164 218 0 chr2 11049922 11050032 -242206551 - L1 LINE L1 -780 5366 5233 271 274 27 14 chr2 11050506 11050579 -242206004 + MIR3 SINE MIR 90 163 -45 2215 107 0 10 chr2 11050588 11050888 -242205695 - AluSg SINE Alu -13 297 1 1706 95 0 17 chr2 11051122 11051377 -242205206 - AluSx SINE Alu 0 307 57 26 30 0 0 chr2 11051466 11051499 -242205084 + AT_rich Low_complexity Low_complexity 1 33 0 2431 82 0 0 chr2 11052844 11053148 -242203435 - AluSx SINE Alu -8 304 1 2832 0 0 0 chr2 11053158 11053460 -242203123 - AluYa5 SINE Alu -9 302 1 26 0 0 0 chr2 11053597 11053623 -242202960 + AT_rich Low_complexity Low_complexity 1 26 0 2062 122 10 0 chr2 11053810 11054106 -242202477 + AluSx SINE Alu 1 299 -13 492 238 109 12 chr2 11055873 11056043 -242200540 - MIR SINE MIR -47 215 33 30 0 0 0 chr2 11056410 11056440 -242200143 + AT_rich Low_complexity Low_complexity 1 30 0 261 0 0 0 chr2 11057814 11057843 -242198740 + (TA)n Simple_repeat Simple_repeat 2 30 0 30 45 0 0 chr2 11057939 11057983 -242198600 + AT_rich Low_complexity Low_complexity 1 44 0 2203 110 3 0 chr2 11058264 11058565 -242198018 - AluSx SINE Alu -10 302 1 240 143 0 0 chr2 11059585 11059627 -242196956 + (TA)n Simple_repeat Simple_repeat 1 42 0 225 132 0 0 chr2 11061325 11061363 -242195220 + (CAT)n Simple_repeat Simple_repeat 1 38 0 190 212 0 0 chr2 11061610 11061643 -242194940 - L3 LINE CR1 -310 1267 1235 2291 95 0 7 chr2 11062079 11062412 -242194171 + AluSq SINE Alu 1 313 0 272 271 212 33 chr2 11062543 11062694 -242193889 - MER5A DNA MER1_type -11 178 1 1220 205 86 4 chr2 11063802 11064046 -242192537 + Tigger7 DNA MER2_type 1 264 -469 554 165 10 21 chr2 11064049 11064146 -242192437 + Tigger7 DNA MER2_type 2392 2487 0 2410 78 3 0 chr2 11064736 11065042 -242191541 - AluSx SINE Alu -5 307 1 2252 58 7 4 chr2 11065246 11065524 -242191059 - AluY SINE Alu 0 311 33 956 177 0 6 chr2 11065534 11065698 -242190885 + AluSg/x SINE Alu 147 309 -1 292 350 37 37 chr2 11066114 11066331 -242190252 - L3 LINE CR1 -286 1291 1075 1718 142 0 44 chr2 11066332 11066650 -242189933 + AluJo SINE Alu 1 305 0 22 0 0 0 chr2 11066993 11067015 -242189568 + AT_rich Low_complexity Low_complexity 1 22 0 1108 181 24 0 chr2 11068312 11068517 -242188066 - MER6B DNA MER2_type 0 210 1 26 64 0 0 chr2 11071128 11071175 -242185408 + AT_rich Low_complexity Low_complexity 1 47 0 189 0 0 0 chr2 11071540 11071561 -242185022 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 31 44 0 0 chr2 11071718 11071763 -242184820 + AT_rich Low_complexity Low_complexity 1 45 0 2075 149 0 0 chr2 11072138 11072447 -242184136 - AluSx SINE Alu -3 309 1 318 317 90 0 chr2 11072653 11072798 -242183785 - MIR SINE MIR 0 262 105 31 44 0 0 chr2 11074340 11074385 -242182198 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr2 11074567 11074589 -242181994 + AT_rich Low_complexity Low_complexity 1 22 0 2111 95 3 71 chr2 11075511 11075837 -242180746 - AluSx SINE Alu -8 304 1 1634 165 0 55 chr2 11075936 11076264 -242180319 - AluJb SINE Alu -2 310 1 339 289 161 55 chr2 11076376 11076745 -242179838 - L1M3 LINE L1 -400 5783 5373 236 325 0 0 chr2 11076792 11076875 -242179708 - L1M3 LINE L1 -852 5294 5212 267 302 87 12 chr2 11076894 11077066 -242179517 - L1M3 LINE L1 -1075 5071 4887 294 216 91 23 chr2 11077843 11077931 -242178652 - L2 LINE L2 0 3313 3220 810 218 60 30 chr2 11078807 11079041 -242177542 + Charlie1 DNA MER1_type 2 242 -2519 394 206 0 11 chr2 11079024 11079116 -242177467 + Charlie1 DNA MER1_type 2622 2712 -49 * 23 0 0 0 chr2 11079116 11079139 -242177444 + AT_rich Low_complexity Low_complexity 1 23 0 2428 59 3 0 chr2 11079139 11079429 -242177154 - AluY SINE Alu -19 292 2 267 95 0 48 chr2 11079434 11079476 -242177107 + Charlie1 DNA MER1_type 2703 2742 -19 466 243 70 61 chr2 11079573 11079762 -242176821 + L1ME3A LINE L1 5977 6169 -1 320 316 86 0 chr2 11079919 11080071 -242176512 + L1ME4a LINE L1 5861 6025 -96 769 289 85 61 chr2 11081026 11081683 -242174900 - HAL1 LINE L1 -1091 1416 744 200 345 48 36 chr2 11082311 11082395 -242174188 + L2 LINE L2 3157 3241 -31 2093 136 0 0 chr2 11082461 11082756 -242173827 + AluSq SINE Alu 1 295 -18 210 245 0 0 chr2 11083336 11083385 -242173198 + (TAG)n Simple_repeat Simple_repeat 1 49 0 490 315 55 15 chr2 11083410 11083610 -242172973 - MIR SINE MIR -54 208 1 684 270 25 0 chr2 11083721 11083884 -242172699 - FAM SINE Alu -4 171 5 44 75 0 0 chr2 11084673 11084766 -242171817 + AT_rich Low_complexity Low_complexity 1 93 0 2057 137 19 3 chr2 11085220 11085527 -242171056 - AluSx SINE Alu 0 312 1 744 235 155 0 chr2 11085842 11086055 -242170528 + MIR SINE MIR 14 259 -3 242 213 43 32 chr2 11086161 11086255 -242170328 + L1ME4a LINE L1 6021 6115 -6 504 222 117 37 chr2 11086513 11086675 -242169908 - MIR SINE MIR -46 216 42 1795 149 0 67 chr2 11086959 11087275 -242169308 - AluJo SINE Alu -17 295 1 995 187 0 6 chr2 11088542 11088708 -242167875 - AluJb SINE Alu -15 297 133 616 341 127 25 chr2 11091330 11091983 -242164600 + L2 LINE L2 2167 2886 -428 902 135 0 118 chr2 11094851 11095029 -242161554 - AluSg/x SINE Alu -19 291 135 1124 102 0 107 chr2 11095045 11095241 -242161342 - AluSg/x SINE Alu -1 309 135 2341 104 0 0 chr2 11095259 11095567 -242161016 - AluSg1 SINE Alu -1 308 1 22 35 0 0 chr2 11095593 11095622 -242160961 + AT_rich Low_complexity Low_complexity 1 29 0 333 335 47 34 chr2 11096399 11096586 -242159997 - MIR SINE MIR -50 212 20 23 54 0 0 chr2 11096792 11096829 -242159754 + AT_rich Low_complexity Low_complexity 1 37 0 1871 127 0 41 chr2 11097762 11098054 -242158529 + AluSx SINE Alu 1 280 -32 186 71 0 0 chr2 11098054 11098082 -242158501 + (CAAT)n Simple_repeat Simple_repeat 4 31 0 488 131 155 0 chr2 11098194 11098278 -242158305 - FRAM SINE Alu -13 163 67 1512 181 71 0 chr2 11098413 11098561 -242158022 - AluJo SINE Alu -11 301 165 2143 91 7 7 chr2 11098561 11098868 -242157715 - AluSp SINE Alu 0 313 1 1512 181 71 0 chr2 11098868 11099000 -242157583 - AluJo SINE Alu -147 165 1 238 283 76 11 chr2 11099029 11099121 -242157462 - L2 LINE L2 0 3313 3216 21 57 0 0 chr2 11099969 11100004 -242156579 + AT_rich Low_complexity Low_complexity 1 35 0 27 0 0 0 chr2 11100752 11100779 -242155804 + AT_rich Low_complexity Low_complexity 1 27 0 291 335 152 0 chr2 11101887 11102051 -242154532 + L1ME LINE L1 5533 5721 -400 306 307 10 53 chr2 11102078 11102209 -242154374 - MIR3 SINE MIR -8 200 72 21 0 0 0 chr2 11103275 11103296 -242153287 + AT_rich Low_complexity Low_complexity 1 21 0 604 238 92 6 chr2 11103414 11103578 -242153005 - MER3 DNA MER1_type -4 205 28 274 250 129 40 chr2 11103611 11103735 -242152848 - MIR SINE MIR -55 153 19 53 49 0 0 chr2 11103976 11104057 -242152526 + AT_rich Low_complexity Low_complexity 1 81 0 555 177 80 0 chr2 11104072 11104185 -242152398 - FLAM_A SINE Alu -11 122 1 1875 169 7 3 chr2 11105185 11105493 -242151090 + AluJb SINE Alu 1 309 -3 195 114 0 0 chr2 11107318 11107353 -242149230 + (CA)n Simple_repeat Simple_repeat 2 36 0 2182 255 24 38 chr2 11107931 11108957 -242147626 + L1MC4 LINE L1 5975 7009 -1033 199 393 28 28 chr2 11109071 11109249 -242147334 - L2 LINE L2 -461 2853 2676 2103 118 3 34 chr2 11109740 11110062 -242146521 - AluSx SINE Alu 0 312 1 622 263 81 0 chr2 11110487 11110647 -242145936 - MER58C DNA MER1_type -6 209 37 1903 146 0 17 chr2 11110681 11110983 -242145600 - AluSx SINE Alu -15 297 1 323 286 150 0 chr2 11111337 11111470 -242145113 + L1ME3A LINE L1 5258 5410 -949 1802 171 3 3 chr2 11111486 11111784 -242144799 + AluJo SINE Alu 1 298 -14 343 315 116 31 chr2 11111862 11112310 -242144273 + L1ME3A LINE L1 5440 5925 -245 733 122 0 0 chr2 11112542 11112649 -242143934 + U6 snRNA snRNA 1 107 0 208 27 54 27 chr2 11112658 11112695 -242143888 + (TAAAAA)n Simple_repeat Simple_repeat 1 38 0 2268 101 0 3 chr2 11115425 11115723 -242140860 + AluSq SINE Alu 3 299 -14 310 172 69 0 chr2 11115920 11115978 -242140605 + Alu SINE Alu 223 284 -16 238 134 0 61 chr2 11115991 11116073 -242140510 + (GGA)n Simple_repeat Simple_repeat 3 79 0 2118 92 7 4 chr2 11116650 11116931 -242139652 + AluSg SINE Alu 1 282 -28 1065 132 19 13 chr2 11116998 11117157 -242139426 + FRAM SINE Alu 1 156 -20 25 0 0 0 chr2 11117159 11117184 -242139399 + AT_rich Low_complexity Low_complexity 1 25 0 1072 221 231 5 chr2 11117759 11118162 -242138421 + L1MD3 LINE L1 5548 6041 -1954 * 1635 203 62 10 chr2 11117891 11118291 -242138292 + L1MB8 LINE L1 5757 6177 -1 2243 99 3 3 chr2 11119341 11119644 -242136939 + AluSg SINE Alu 1 303 -7 3567 172 52 117 chr2 11120189 11121112 -242135471 + L1MC/D LINE L1 3887 4869 -1464 1832 167 0 0 chr2 11121112 11121400 -242135183 + AluJo SINE Alu 1 288 -24 3567 172 52 117 chr2 11121400 11122028 -242134555 + L1MC/D LINE L1 4869 5537 -796 2150 99 17 3 chr2 11122028 11122320 -242134263 + AluSx SINE Alu 1 296 -16 2804 22 0 3 chr2 11122322 11122641 -242133942 + AluYb8 SINE Alu 1 318 0 3567 172 52 117 chr2 11122641 11123098 -242133485 + L1MC/D LINE L1 5538 5792 -541 977 173 71 74 chr2 11123221 11123430 -242133153 - L1MC2 LINE L1 -176 6168 5959 3129 127 12 0 chr2 11123430 11123917 -242132666 - L1PB1 LINE L1 -13 6138 5646 977 173 71 74 chr2 11123917 11124030 -242132553 - L1MC2 LINE L1 -385 5959 5847 3459 143 51 22 chr2 11124036 11124691 -242131892 - L1MA8 LINE L1 0 6291 5614 2120 128 0 3 chr2 11124691 11124996 -242131587 - AluSx SINE Alu -8 304 1 3459 143 51 22 chr2 11124996 11125025 -242131558 - L1MA8 LINE L1 -677 5614 5587 3033 211 14 24 chr2 11125025 11126072 -242130511 + L1MCa LINE L1 2191 3227 -3199 314 210 0 0 chr2 11126220 11126282 -242130301 - MLT1B LTR MaLR -221 169 108 2202 116 0 13 chr2 11126316 11126619 -242129964 + AluSq SINE Alu 1 299 -14 355 235 101 27 chr2 11126991 11127140 -242129443 + HAL1 LINE L1 1428 1587 -920 1973 101 4 14 chr2 11127243 11127521 -242129062 + AluSx SINE Alu 1 275 -37 332 22 22 0 chr2 11127660 11127705 -242128878 + (TG)n Simple_repeat Simple_repeat 2 47 0 3002 205 20 29 chr2 11127727 11128016 -242128567 + L1MB7 LINE L1 4483 4773 -1373 1594 169 11 7 chr2 11128016 11128288 -242128295 + AluJo SINE Alu 1 273 -39 3002 205 20 29 chr2 11128288 11128765 -242127818 + L1MB7 LINE L1 4773 5242 -904 1075 230 126 25 chr2 11128771 11129127 -242127456 + L1MB7 LINE L1 5402 5793 -369 1758 252 94 73 chr2 11129135 11129858 -242126725 - MER21B LTR ERV1 -125 738 1 1604 243 23 0 chr2 11129858 11130245 -242126338 + L1MB7 LINE L1 5787 6182 -2 597 231 48 16 chr2 11130478 11130664 -242125919 + L1ME1 LINE L1 5701 5892 -274 555 286 38 54 chr2 11130661 11130976 -242125607 + L1MC5 LINE L1 1073 1382 -5014 * 374 303 47 31 chr2 11130974 11131228 -242125355 + L1M4 LINE L1 4748 5005 -1141 * 269 115 39 19 chr2 11131229 11131281 -242125302 + MLT1A1 LTR MaLR 1 53 -312 733 236 40 0 chr2 11131836 11132010 -242124573 + MLT1A1 LTR MaLR 170 350 -15 586 257 56 34 chr2 11132547 11132883 -242123700 + LTR35 LTR ERV1 350 618 0 451 214 247 6 chr2 11132941 11133119 -242123464 + L1MC4 LINE L1 7559 7779 -263 764 188 130 39 chr2 11133119 11133327 -242123256 + Cheshire DNA MER1_type 1803 2029 -391 2198 158 98 15 chr2 11133327 11133793 -242122790 + L1MC3 LINE L1 6249 6316 -17 1790 179 77 3 chr2 11133794 11134173 -242122410 + Cheshire DNA MER1_type 2014 2420 0 469 165 9 35 chr2 11134175 11134290 -242122293 + L1MC5 LINE L1 7806 7917 -44 1614 173 26 29 chr2 11134320 11134626 -242121957 + AluJo SINE Alu 1 305 -7 305 266 15 38 chr2 11134686 11134892 -242121691 + L1MC5 LINE L1 3649 3848 -2367 68 24 0 0 chr2 11135046 11135128 -242121455 + AT_rich Low_complexity Low_complexity 1 82 0 527 313 36 27 chr2 11135140 11135475 -242121108 + L1MC5 LINE L1 5423 5760 -2117 297 218 142 120 chr2 11135550 11135775 -242120808 + L1MC5 LINE L1 6897 7126 -904 628 232 35 51 chr2 11135887 11136141 -242120442 + L1MC5 LINE L1 7238 7487 -543 2095 206 27 29 chr2 11136645 11137168 -242119415 + L1MB7 LINE L1 5595 6116 -68 918 219 158 50 chr2 11137678 11138135 -242118448 + Charlie7 DNA MER1_type 2090 2595 -17 2332 96 0 3 chr2 11138320 11138622 -242117961 + AluSq SINE Alu 2 302 -11 1333 97 11 5 chr2 11138744 11138929 -242117654 - AluSq SINE Alu -127 186 1 233 297 36 9 chr2 11138996 11139107 -242117476 + L2 LINE L2 2624 2737 -577 952 103 82 0 chr2 11139132 11139278 -242117305 - AluSg/x SINE Alu -1 311 154 1424 181 15 39 chr2 11139403 11139740 -242116843 + MER33 DNA MER1_type 1 319 -5 22 0 0 0 chr2 11139890 11139912 -242116671 + AT_rich Low_complexity Low_complexity 1 22 0 3140 252 99 68 chr2 11140175 11141626 -242114957 + L2 LINE L2 1426 2922 -392 1429 217 39 39 chr2 11141805 11141917 -242114666 + L1MC4 LINE L1 6528 6639 -1403 2245 108 0 10 chr2 11141917 11142223 -242114360 + AluSx SINE Alu 1 303 -9 1429 217 39 39 chr2 11142223 11142268 -242114315 + L1MC4 LINE L1 6639 6683 -1359 306 0 0 0 chr2 11142268 11142302 -242114281 + (CA)n Simple_repeat Simple_repeat 2 35 0 1429 217 39 39 chr2 11142302 11142530 -242114053 + L1MC4 LINE L1 6682 6914 -1128 597 193 62 0 chr2 11142564 11142709 -242113874 + L1MD3 LINE L1 7834 7987 -8 530 170 38 0 chr2 11142714 11142820 -242113763 + L1MC4 LINE L1 6898 7007 -1035 * 734 202 118 11 chr2 11142797 11142975 -242113608 + L1MC4 LINE L1 7525 7721 -321 622 267 163 48 chr2 11143026 11143400 -242113183 + L2 LINE L2 2897 3313 0 2354 84 0 0 chr2 11144137 11144435 -242112148 - AluSc SINE Alu -11 298 1 866 158 13 19 chr2 11144530 11144688 -242111895 - MER2 DNA MER2_type -1 344 188 1187 174 0 0 chr2 11146013 11146209 -242110374 - MER2 DNA MER2_type -149 196 1 1794 167 40 22 chr2 11146510 11146881 -242109702 + L1MC1 LINE L1 5956 6333 0 473 318 64 98 chr2 11147104 11147277 -242109306 - L3 LINE CR1 -761 816 639 2438 83 3 0 chr2 11147277 11147579 -242109004 + AluSp SINE Alu 1 303 -10 473 318 64 98 chr2 11147579 11147852 -242108731 - L3 LINE CR1 -938 639 390 1756 175 7 3 chr2 11147852 11148149 -242108434 + AluJb SINE Alu 11 308 -4 473 318 64 98 chr2 11148149 11148249 -242108334 - L3 LINE CR1 -1187 390 288 248 233 276 17 chr2 11148648 11148764 -242107819 - MIR3 SINE MIR -21 187 42 22 70 0 0 chr2 11148973 11149016 -242107567 + AT_rich Low_complexity Low_complexity 1 43 0 22 56 0 0 chr2 11149838 11149874 -242106709 + AT_rich Low_complexity Low_complexity 1 36 0 318 127 113 0 chr2 11150538 11150609 -242105974 + L1ME4a LINE L1 6042 6120 -1 272 262 58 81 chr2 11150703 11150875 -242105708 - MIR SINE MIR -46 216 49 785 164 0 0 chr2 11151090 11151212 -242105371 + FLAM_A SINE Alu 4 125 -8 203 193 18 18 chr2 11151520 11151577 -242105006 + (CA)n Simple_repeat Simple_repeat 1 57 0 737 158 0 0 chr2 11152615 11152729 -242103854 + FLAM_A SINE Alu 2 115 -18 2166 99 0 3 chr2 11153564 11153857 -242102726 + AluSx SINE Alu 1 292 -20 846 288 90 54 chr2 11154018 11154386 -242102197 - L2 LINE L2 -1062 2252 1872 433 301 52 42 chr2 11154595 11154788 -242101795 - MIR SINE MIR -11 251 57 21 57 0 0 chr2 11154824 11154859 -242101724 + AT_rich Low_complexity Low_complexity 1 35 0 1830 137 158 12 chr2 11155059 11155401 -242101182 + MSTA LTR MaLR 1 392 -36 189 298 88 35 chr2 11155448 11155505 -242101078 + MIR SINE MIR 16 75 -133 206 295 167 0 chr2 11155531 11155609 -242100974 - L2 LINE L2 -1356 1958 1868 184 218 127 55 chr2 11155622 11155677 -242100906 + MIR SINE MIR 83 141 -67 322 123 14 123 chr2 11155784 11155857 -242100726 + MER96B DNA MER1_type? 168 232 -185 * 918 166 91 58 chr2 11155856 11156097 -242100486 + MER96B DNA MER1_type? 169 417 0 2422 57 3 13 chr2 11156173 11156474 -242100109 + AluY SINE Alu 1 298 -13 211 167 0 42 chr2 11156481 11156529 -242100054 + GA-rich Low_complexity Low_complexity 2 47 0 1930 131 0 36 chr2 11157080 11157385 -242099198 - AluSx SINE Alu -18 294 1 2208 106 0 0 chr2 11157971 11158263 -242098320 + AluSx SINE Alu 1 292 -20 685 0 24 0 chr2 11158263 11158348 -242098235 + (GA)n Simple_repeat Simple_repeat 2 88 0 225 338 28 0 chr2 11159314 11159459 -242097124 + L1ME3A LINE L1 5689 5837 -284 234 266 278 6 chr2 11159873 11160046 -242096537 - L1M4 LINE L1 -1538 4608 4389 496 237 89 7 chr2 11160266 11160401 -242096182 + L1ME3A LINE L1 5993 6138 -32 2175 114 20 0 chr2 11160490 11160789 -242095794 + AluSx SINE Alu 1 305 -7 2335 80 0 23 chr2 11161283 11161585 -242094998 + AluSg SINE Alu 1 295 -15 1764 92 8 16 chr2 11162559 11162808 -242093775 - AluSq SINE Alu -16 297 51 1726 169 51 3 chr2 11162998 11163293 -242093290 + AluJb SINE Alu 1 309 -3 203 182 0 0 chr2 11165054 11165087 -242091496 + (CA)n Simple_repeat Simple_repeat 1 33 0 1296 166 42 33 chr2 11165181 11165518 -242091065 + Charlie1 DNA MER1_type 2303 2642 -119 1002 215 38 57 chr2 11165570 11165937 -242090646 - L1ME1 LINE L1 -5 6161 5802 2935 156 73 14 chr2 11165968 11166595 -242089988 + L1MC2 LINE L1 5670 6333 -11 23 0 0 0 chr2 11166742 11166765 -242089818 + AT_rich Low_complexity Low_complexity 1 23 0 227 224 104 15 chr2 11167326 11167393 -242089190 + L1MC/D LINE L1 5732 5804 -529 222 258 0 32 chr2 11168406 11168468 -242088115 - L2 LINE L2 -86 3227 3168 26 30 0 0 chr2 11168732 11168765 -242087818 + AT_rich Low_complexity Low_complexity 1 33 0 776 193 58 18 chr2 11169187 11169358 -242087225 + MER3 DNA MER1_type 32 209 0 21 36 0 0 chr2 11169480 11169508 -242087075 + AT_rich Low_complexity Low_complexity 1 28 0 258 340 158 14 chr2 11170620 11170829 -242085754 + MIR SINE MIR 3 241 -21 333 0 0 0 chr2 11170876 11170913 -242085670 + (TA)n Simple_repeat Simple_repeat 2 38 0 11423 37 11 1 chr2 11170915 11173077 -242083506 - L1PA5 LINE L1 0 6154 3976 411 308 107 16 chr2 11173185 11173488 -242083095 - MLT1J LTR MaLR -2 509 137 831 228 120 48 chr2 11173929 11174263 -242082320 + L1MEc LINE L1 73 430 -5966 704 217 100 11 chr2 11174300 11174480 -242082103 + L1MEc LINE L1 504 699 -5697 1952 131 7 7 chr2 11174481 11174772 -242081811 - AluSg SINE Alu -18 292 2 243 135 0 0 chr2 11174772 11174809 -242081774 + Alu SINE Alu 36 72 -229 1999 145 0 45 chr2 11175133 11175492 -242081091 + MLT1B LTR MaLR 2 344 -46 251 103 0 0 chr2 11175558 11175597 -242080986 + L1MA8 LINE L1 6234 6272 -19 28 29 0 0 chr2 11175674 11175709 -242080874 + AT_rich Low_complexity Low_complexity 1 35 0 273 306 111 9 chr2 11176520 11176628 -242079955 + MIR SINE MIR 19 137 -71 2088 170 31 12 chr2 11176971 11177388 -242079195 - L1MC1 LINE L1 0 6333 5909 1807 108 16 49 chr2 11177388 11177454 -242079129 + L1MC1 LINE L1 5608 5675 -658 2082 78 37 0 chr2 11177454 11177753 -242078830 + AluSc SINE Alu 1 309 0 1807 108 16 49 chr2 11177753 11177984 -242078599 + L1MC1 LINE L1 5675 5898 -435 191 80 0 0 chr2 11178040 11178065 -242078518 + L2 LINE L2 3217 3241 -31 725 203 83 95 chr2 11178412 11178654 -242077929 - MER8 DNA MER2_type 0 239 1 1118 331 172 43 chr2 11178852 11180873 -242075710 - L2 LINE L2 -437 2877 596 1726 174 4 0 chr2 11180887 11181162 -242075421 - AluJb SINE Alu -36 276 1 200 233 55 68 chr2 11181546 11181619 -242074964 - L2 LINE L2 -1 3271 3200 3710 36 0 0 chr2 11181933 11182373 -242074210 + L1PA3 LINE L1 5709 6148 -7 524 116 42 53 chr2 11183896 11183991 -242072592 + AluSg/x SINE Alu 199 292 -17 790 63 5 68 chr2 11184034 11184225 -242072358 + (GGA)n Simple_repeat Simple_repeat 2 180 0 237 65 0 0 chr2 11184459 11184490 -242072093 + (A)n Simple_repeat Simple_repeat 1 31 0 2227 105 0 7 chr2 11184645 11184940 -242071643 - AluSc SINE Alu -16 293 1 642 71 0 0 chr2 11184954 11185039 -242071544 - L1PA5 LINE L1 -2 6152 6068 272 322 74 16 chr2 11186112 11186233 -242070350 + L2 LINE L2 3180 3307 -6 1330 224 116 77 chr2 11186264 11187088 -242069495 + L2 LINE L2 2288 3313 0 596 203 129 25 chr2 11187086 11187249 -242069334 - MIR SINE MIR -13 249 70 * 6746 53 10 24 chr2 11187249 11187872 -242068711 + L1PA7 LINE L1 4983 5583 -571 1920 118 0 0 chr2 11187872 11188135 -242068448 + AluSx SINE Alu 1 263 -49 6746 53 10 24 chr2 11188135 11188680 -242067903 + L1PA7 LINE L1 5583 6134 -20 405 0 0 0 chr2 11188683 11188728 -242067855 + (TAA)n Simple_repeat Simple_repeat 3 47 0 764 291 81 73 chr2 11188925 11189469 -242067114 + L2 LINE L2 2768 3313 0 314 307 48 24 chr2 11189873 11190039 -242066544 + L1MEc LINE L1 44 213 -6183 874 123 23 0 chr2 11190356 11190486 -242066097 + FLAM_C SINE Alu 1 133 0 2498 63 0 0 chr2 11190680 11190982 -242065601 + AluY SINE Alu 1 302 -9 593 236 58 71 chr2 11191071 11191380 -242065203 + L1MEc LINE L1 667 971 -5234 2348 95 0 28 chr2 11191382 11191699 -242064884 + AluSx SINE Alu 1 308 -4 21 0 0 0 chr2 11191904 11191925 -242064658 + AT_rich Low_complexity Low_complexity 1 21 0 2062 116 148 19 chr2 11191925 11192304 -242064279 + MSTA LTR MaLR 1 428 0 690 284 84 6 chr2 11192323 11192643 -242063940 + L1MEc LINE L1 2280 2624 -3591 321 266 78 47 chr2 11193849 11193977 -242062606 + L2 LINE L2 3182 3313 0 509 261 49 8 chr2 11195195 11195374 -242061209 + MIR SINE MIR 30 213 -49 2331 106 0 0 chr2 11195909 11196211 -242060372 + AluSx SINE Alu 1 302 -10 286 307 175 53 chr2 11197248 11197281 -242059302 + MIR SINE MIR 1 29 -233 2174 105 0 26 chr2 11197281 11197586 -242058997 + AluSg SINE Alu 2 298 -12 286 307 175 53 chr2 11197586 11197780 -242058803 + MIR SINE MIR 29 256 -6 330 297 7 41 chr2 11197954 11198099 -242058484 + L1ME4a LINE L1 5927 6066 -55 2288 95 48 28 chr2 11198172 11198529 -242058054 + THE1B LTR MaLR 1 364 0 33 43 0 0 chr2 11198612 11198659 -242057924 + AT_rich Low_complexity Low_complexity 1 47 0 198 0 0 0 chr2 11199395 11199417 -242057166 + (CA)n Simple_repeat Simple_repeat 1 22 0 1031 292 92 44 chr2 11200029 11200550 -242056033 - L2 LINE L2 -715 2599 2054 686 299 25 29 chr2 11200691 11200935 -242055648 + MIR SINE MIR 20 262 0 726 208 0 50 chr2 11201571 11201730 -242054853 + AluJo SINE Alu 16 166 -146 1892 129 58 0 chr2 11201730 11202039 -242054544 - Tigger3(Golem) DNA MER2_type -636 2393 2067 728 184 0 98 chr2 11202035 11202198 -242054385 - Tigger3(Golem) DNA MER2_type -2882 147 1 * 280 264 136 50 chr2 11202988 11203128 -242053455 - MIR SINE MIR -57 205 54 191 91 0 45 chr2 11203253 11203297 -242053286 + (CAAAAA)n Simple_repeat Simple_repeat 2 43 0 500 77 0 0 chr2 11203445 11203510 -242053073 - AluY SINE Alu -12 299 235 1249 111 0 11 chr2 11203510 11203690 -242052893 - AluY SINE Alu -133 178 1 2113 224 31 4 chr2 11203718 11204196 -242052387 + L1MCa LINE L1 27 517 -5909 214 171 0 0 chr2 11204210 11204251 -242052332 + (TG)n Simple_repeat Simple_repeat 2 42 0 315 0 0 0 chr2 11204266 11204301 -242052282 + (TG)n Simple_repeat Simple_repeat 2 36 0 3086 159 70 45 chr2 11204316 11204972 -242051611 - L1M4c LINE L1 -4776 1608 929 2068 128 3 0 chr2 11204972 11205269 -242051314 + AluSx SINE Alu 1 298 -14 3086 159 70 45 chr2 11205269 11205383 -242051200 - L1M4c LINE L1 -5455 929 819 1688 183 0 11 chr2 11205510 11205795 -242050788 - AluJb SINE Alu -30 282 1 6207 175 90 57 chr2 11205796 11207381 -242049202 - L1MCa LINE L1 -4763 1663 27 2451 41 24 0 chr2 11207487 11207778 -242048805 + AluY SINE Alu 1 298 -13 6234 207 56 64 chr2 11207886 11208339 -242048244 + L1MCa LINE L1 1688 2143 -4283 2051 121 35 0 chr2 11208339 11208629 -242047954 + AluSx SINE Alu 1 300 -12 6234 207 56 64 chr2 11208629 11209562 -242047021 + L1MCa LINE L1 2143 3082 -3344 969 81 0 0 chr2 11209562 11209685 -242046898 + AluY SINE Alu 174 296 -15 6234 207 56 64 chr2 11209685 11210024 -242046559 + L1MCa LINE L1 3082 3422 -3004 225 0 0 0 chr2 11210024 11210049 -242046534 + (CAA)n Simple_repeat Simple_repeat 3 27 0 6234 207 56 64 chr2 11210049 11210543 -242046040 + L1MCa LINE L1 3422 3919 -2507 1661 152 42 30 chr2 11210543 11210716 -242045867 - MER44D DNA MER2_type -1882 609 440 2314 93 0 0 chr2 11210716 11211018 -242045565 + AluSq SINE Alu 1 302 -11 1661 152 42 30 chr2 11211018 11211179 -242045404 - MER44D DNA MER2_type -2051 440 1 6234 207 56 64 chr2 11211179 11211437 -242045146 + L1MCa LINE L1 3919 4178 -2248 2271 105 0 3 chr2 11211437 11211742 -242044841 - AluSx SINE Alu -8 304 1 6234 207 56 64 chr2 11211742 11212392 -242044191 + L1MCa LINE L1 4178 4911 -1515 1350 179 37 7 chr2 11212395 11212691 -242043892 + L1MCa LINE L1 1900 2204 -4222 722 163 18 54 chr2 11212708 11212874 -242043709 - L1MC2 LINE L1 -10 6334 6175 2194 97 0 39 chr2 11263897 11264207 -241992376 + AluSq SINE Alu 1 298 -15 279 291 120 49 chr2 11264292 11264437 -241992146 + MIR SINE MIR 3 153 -58 2441 42 0 3 chr2 11264539 11264857 -241991726 + AluY SINE Alu 1 317 0 2293 108 3 0 chr2 11266941 11267246 -241989337 + AluSx SINE Alu 6 311 -1 300 233 138 0 chr2 11267336 11267452 -241989131 + MIR3 SINE MIR 48 179 -29 2281 102 0 0 chr2 11267884 11268196 -241988387 + AluSq SINE Alu 1 312 0 1326 139 10 19 chr2 11269063 11269272 -241987311 - AluJo SINE Alu -105 207 1 350 69 17 0 chr2 11269382 11269440 -241987143 + (TTCC)n Simple_repeat Simple_repeat 4 62 0 846 240 0 62 chr2 11269563 11269788 -241986795 + MIR SINE MIR 21 231 -31 354 305 85 0 chr2 11269916 11269953 -241986630 + L2 LINE L2 3143 3175 -97 1188 195 145 11 chr2 11269953 11270215 -241986368 - AluJo SINE Alu -4 298 2 354 305 85 0 chr2 11270215 11270295 -241986288 + L2 LINE L2 3175 3270 -2 466 276 119 27 chr2 11270392 11270577 -241986006 - MIR SINE MIR -12 250 49 2214 121 0 13 chr2 11271091 11271398 -241985185 + AluSx SINE Alu 1 303 -9 216 0 0 0 chr2 11271398 11271422 -241985161 + (TA)n Simple_repeat Simple_repeat 2 25 0 557 181 69 0 chr2 11271821 11271937 -241984646 + MER3 DNA MER1_type 7 130 -79 206 54 0 54 chr2 11271937 11271974 -241984609 + (TTTAA)n Simple_repeat Simple_repeat 1 35 0 843 152 0 0 chr2 11272052 11272190 -241984393 + MLT1A1 LTR MaLR 1 138 -227 * 2034 149 109 92 chr2 11272189 11272805 -241983778 + MER4A LTR ERV1 37 662 -2 2043 149 41 70 chr2 11272816 11273356 -241983227 - MLT2A2 LTR ERVL 0 554 1 943 121 45 38 chr2 11273359 11273516 -241983067 + MLT1A1 LTR MaLR 208 365 0 510 243 19 0 chr2 11273517 11273624 -241982959 + MER5A DNA MER1_type 1 109 -80 219 139 28 0 chr2 11273656 11273692 -241982891 - MIR3 SINE MIR -50 158 122 539 135 15 2 chr2 11273819 11273912 -241982671 - MSTD LTR MaLR -54 413 244 682 151 0 0 chr2 11273919 11274025 -241982558 - MSTD LTR MaLR -290 106 1 315 95 11 7 chr2 11274450 11274505 -241982078 + AluJo SINE Alu 1 44 -258 231 301 81 62 chr2 11274505 11274814 -241981769 - L2 LINE L2 -1743 1571 1257 187 254 186 0 chr2 11274984 11275043 -241981540 - MIR3 SINE MIR -11 197 128 1894 127 3 7 chr2 11275043 11275335 -241981248 - MSTA LTR MaLR 0 428 138 846 141 15 0 chr2 11275474 11275609 -241980974 - MSTA LTR MaLR -291 137 1 253 295 42 11 chr2 11275611 11275706 -241980877 - MIR SINE MIR -78 130 33 197 321 0 0 chr2 11275861 11275914 -241980669 + MIR SINE MIR 95 147 -61 209 222 0 0 chr2 11276578 11276623 -241979960 + T-rich Low_complexity Low_complexity 1 45 0 311 364 128 5 chr2 11276871 11277058 -241979525 + L2 LINE L2 2862 3071 -201 2237 109 0 10 chr2 11277547 11277849 -241978734 - AluSc SINE Alu -10 299 1 1797 140 0 15 chr2 11278020 11278291 -241978292 + AluJo SINE Alu 26 292 -20 796 294 126 26 chr2 11278637 11278917 -241977666 - L1MC4a LINE L1 -1638 6170 5919 2276 121 7 0 chr2 11278917 11279224 -241977359 - AluSq SINE Alu -4 309 1 796 294 126 26 chr2 11279224 11279514 -241977069 - L1MC4a LINE L1 -1889 5919 5543 1792 164 3 35 chr2 11279816 11280133 -241976450 + AluJo SINE Alu 1 307 -5 1604 157 23 134 chr2 11281042 11281256 -241975327 + MLT1B LTR MaLR 1 143 -247 2178 125 0 3 chr2 11281256 11281552 -241975031 + AluSx SINE Alu 1 295 -17 1604 157 23 134 chr2 11281552 11281776 -241974807 + MLT1B LTR MaLR 143 390 0 234 0 0 0 chr2 11282132 11282158 -241974425 + (TG)n Simple_repeat Simple_repeat 1 26 0 762 152 0 23 chr2 11283002 11283134 -241973449 + FLAM_C SINE Alu 5 133 0 263 224 40 0 chr2 11283162 11283238 -241973345 + MER58 DNA MER1_type 2342 2420 0 479 273 120 0 chr2 11283455 11283638 -241972945 + L1ME3 LINE L1 5687 5891 -271 203 229 0 0 chr2 11284276 11284311 -241972272 + polypurine Low_complexity Low_complexity 2 36 0 1992 127 60 0 chr2 11285556 11285840 -241970743 - AluSq SINE Alu -12 301 1 314 169 31 0 chr2 11285897 11285962 -241970621 - L1MD3 LINE L1 -1016 6979 6913 335 274 123 19 chr2 11286143 11286249 -241970334 - MIR SINE MIR -112 150 34 245 314 39 0 chr2 11286662 11286764 -241969819 + MIR SINE MIR 128 233 -29 699 101 0 0 chr2 11286971 11287070 -241969513 - L1MB5 LINE L1 -7 6167 6069 316 282 141 0 chr2 11287257 11287342 -241969241 - L2 LINE L2 -4 3309 3213 228 305 124 38 chr2 11288356 11288461 -241968122 + L2 LINE L2 2992 3105 -167 238 353 52 0 chr2 11288743 11288859 -241967724 - L2 LINE L2 -9 3263 3142 267 359 60 28 chr2 11289071 11289288 -241967295 - MIR SINE MIR -30 232 9 361 258 92 58 chr2 11289662 11289782 -241966801 + L2 LINE L2 3141 3264 -8 284 178 14 0 chr2 11289782 11289855 -241966728 + (TCCA)n Simple_repeat Simple_repeat 2 75 0 824 162 6 0 chr2 11289893 11290060 -241966523 + (TCCA)n Simple_repeat Simple_repeat 4 171 0 333 0 0 0 chr2 11291179 11291216 -241965367 + (TG)n Simple_repeat Simple_repeat 1 37 0 536 168 112 0 chr2 11292265 11292372 -241964211 + 5S rRNA rRNA 2 120 -1 2343 43 0 18 chr2 11292518 11292797 -241963786 - AluY SINE Alu -14 297 24 2393 85 10 7 chr2 11293685 11293990 -241962593 + AluY SINE Alu 2 307 -4 2325 103 3 3 chr2 11294311 11294623 -241961960 - AluSq SINE Alu -1 312 1 230 317 17 0 chr2 11294648 11294708 -241961875 + L2 LINE L2 3141 3201 -71 1746 174 0 4 chr2 11294722 11295003 -241961580 + AluJb SINE Alu 1 280 -32 779 262 30 47 chr2 11295026 11295120 -241961463 - MIR SINE MIR -13 249 155 1641 229 92 79 chr2 11295120 11295737 -241960846 - MLT1E2 LTR MaLR -1 625 1 779 262 30 47 chr2 11295737 11295875 -241960708 - MIR SINE MIR -107 155 21 1834 184 0 7 chr2 11295968 11296277 -241960306 - AluJo SINE Alu -5 307 1 1006 93 0 7 chr2 11297102 11297242 -241959341 - MER85 DNA T2_type 0 139 1 3217 96 6 17 chr2 11297800 11298267 -241958316 + L1PA13 LINE L1 5702 6163 0 222 150 0 0 chr2 11298899 11298939 -241957644 + (CA)n Simple_repeat Simple_repeat 1 40 0 398 249 104 57 chr2 11299606 11299865 -241956718 + MLT1J LTR MaLR 1 269 -242 2221 119 27 0 chr2 11300090 11300385 -241956198 + AluSx SINE Alu 1 303 -9 391 329 43 7 chr2 11301170 11301310 -241955273 + MIR SINE MIR 3 147 -115 1214 214 43 46 chr2 11301377 11301424 -241955159 - HAL1 LINE L1 -87 2420 2374 2047 120 0 7 chr2 11301424 11301725 -241954858 - AluSx SINE Alu -13 299 1 1214 214 43 46 chr2 11301725 11302070 -241954513 - HAL1 LINE L1 -133 2374 2029 304 318 95 8 chr2 11302504 11302630 -241953953 - L2 LINE L2 0 3272 3136 822 172 15 0 chr2 11303366 11303500 -241953083 - FAM SINE Alu -16 169 34 1164 279 68 31 chr2 11304177 11304755 -241951828 + L1ME3A LINE L1 5353 5951 -219 288 186 204 115 chr2 11304826 11304909 -241951674 + MER5A DNA MER1_type 55 153 -36 1773 148 0 14 chr2 11304909 11305229 -241951354 - AluJb SINE Alu 0 316 1 288 186 204 115 chr2 11305229 11305257 -241951326 + MER5A DNA MER1_type 153 177 -12 932 75 15 0 chr2 11305321 11305454 -241951129 + AluSc SINE Alu 166 300 -9 259 148 68 34 chr2 11306311 11306399 -241950184 - L1ME4a LINE L1 -8 6113 6023 42 20 0 0 chr2 11306403 11306452 -241950131 + AT_rich Low_complexity Low_complexity 1 49 0 1865 137 3 0 chr2 11306452 11306737 -241949846 - AluSx SINE Alu -26 286 1 380 93 0 0 chr2 11306751 11306805 -241949778 - L1ME4a LINE L1 -109 6012 5959 502 281 102 12 chr2 11307713 11307880 -241948703 - MIR SINE MIR -14 248 67 195 100 0 0 chr2 11307898 11307928 -241948655 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 649 239 37 50 chr2 11308192 11308410 -241948173 - MIR SINE MIR -33 229 15 557 333 50 74 chr2 11309563 11310079 -241946504 - HAL1 LINE L1 -1519 988 485 234 0 0 0 chr2 11310251 11310277 -241946306 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 27 0 0 0 chr2 11310444 11310471 -241946112 + AT_rich Low_complexity Low_complexity 1 27 0 267 338 68 87 chr2 11310820 11311086 -241945497 - L2 LINE L2 -12 3260 3000 1930 134 3 3 chr2 11311822 11312129 -241944454 - AluSq SINE Alu -6 307 1 885 214 92 0 chr2 11312236 11312442 -241944141 - MIR SINE MIR -30 232 8 217 112 72 16 chr2 11312510 11312635 -241943948 + (TA)n Simple_repeat Simple_repeat 1 132 0 735 12 0 0 chr2 11313476 11313560 -241943023 + (TTTC)n Simple_repeat Simple_repeat 1 84 0 239 188 0 31 chr2 11313560 11313624 -241942959 + CT-rich Low_complexity Low_complexity 4 65 0 * 298 170 18 27 chr2 11313618 11313730 -241942853 + (CTTG)n Simple_repeat Simple_repeat 2 112 0 * 371 183 14 42 chr2 11313725 11313867 -241942716 + CT-rich Low_complexity Low_complexity 5 142 0 193 116 23 23 chr2 11313909 11313952 -241942631 + CT-rich Low_complexity Low_complexity 4 46 0 524 243 6 0 chr2 11314286 11314455 -241942128 + (TG)n Simple_repeat Simple_repeat 1 170 0 423 0 0 0 chr2 11314800 11314847 -241941736 + (TG)n Simple_repeat Simple_repeat 1 47 0 812 124 0 8 chr2 11315592 11315721 -241940862 + FLAM_A SINE Alu 13 140 -2 759 154 16 0 chr2 11315743 11315866 -241940717 + FRAM SINE Alu 1 117 -59 2007 69 62 0 chr2 11315951 11316239 -241940344 - AluY SINE Alu -5 306 1 225 0 0 0 chr2 11316350 11316375 -241940208 + (TTTTA)n Simple_repeat Simple_repeat 5 29 0 1932 140 0 3 chr2 11316388 11316680 -241939903 - AluSx SINE Alu -15 297 7 696 195 49 0 chr2 11317438 11317561 -241939022 - FLAM_C SINE Alu -13 130 2 254 188 21 0 chr2 11317668 11317716 -241938867 + AluY SINE Alu 119 167 -134 2095 113 0 0 chr2 11317716 11318007 -241938576 + AluSq SINE Alu 19 309 -4 436 351 71 24 chr2 11318051 11318347 -241938236 - L1ME4a LINE L1 -147 5974 5665 197 356 59 42 chr2 11318505 11318623 -241937960 + L2 LINE L2 3170 3289 -24 396 244 41 86 chr2 11318730 11318927 -241937656 - L1MC5 LINE L1 -33 7928 7741 231 338 52 13 chr2 11319029 11319183 -241937400 + MIR3 SINE MIR 32 191 -17 769 214 39 6 chr2 11319214 11319392 -241937191 + MER5A DNA MER1_type 3 186 -3 2130 120 0 0 chr2 11319621 11319921 -241936662 + AluSq SINE Alu 1 300 -13 503 225 101 7 chr2 11320046 11320184 -241936399 + L2 LINE L2 3161 3311 -2 1854 118 19 45 chr2 11320283 11320596 -241935987 + AluSg SINE Alu 1 305 -5 248 319 217 12 chr2 11320852 11321018 -241935565 - MIR SINE MIR -1 261 62 293 162 47 54 chr2 11321018 11321166 -241935417 + (TTATA)n Simple_repeat Simple_repeat 1 147 0 3736 171 14 43 chr2 11321170 11321661 -241934922 - L1MB7 LINE L1 -26 6158 5695 2216 100 0 0 chr2 11321661 11321961 -241934622 - AluSx SINE Alu -12 300 1 3736 171 14 43 chr2 11321961 11322229 -241934354 - L1MB7 LINE L1 -489 5695 5421 276 327 163 0 chr2 11322679 11322832 -241933751 + MIR SINE MIR 77 254 -8 325 239 0 0 chr2 11324243 11324310 -241932273 - MER6 DNA MER2_type 0 865 799 256 122 24 0 chr2 11324316 11324355 -241932228 + MER6 DNA MER2_type 738 777 -88 2176 104 27 99 chr2 11324355 11324720 -241931863 - MER1B DNA MER1_type 0 339 1 214 333 12 25 chr2 11324843 11324924 -241931659 - L2 LINE L2 -1 3271 3192 350 299 17 8 chr2 11325137 11325254 -241931329 - MIR SINE MIR -80 182 65 465 284 136 0 chr2 11325431 11325586 -241930997 + MER5A DNA MER1_type 14 189 0 524 261 118 33 chr2 11325773 11325984 -241930599 + MIR SINE MIR 14 242 -20 248 291 197 0 chr2 11326329 11326456 -241930127 - MIR SINE MIR -12 250 99 318 203 14 0 chr2 11326456 11326525 -241930058 - MER116 DNA Mariner -1 79 10 927 246 22 18 chr2 11326650 11326874 -241929709 - MIR SINE MIR -35 227 3 184 268 134 12 chr2 11327065 11327147 -241929436 - MIR SINE MIR -117 145 54 999 169 75 0 chr2 11327768 11327969 -241928614 - L1MD1 LINE L1 -1 6241 6026 550 151 0 0 chr2 11327972 11328058 -241928525 - FRAM SINE Alu -16 160 75 842 129 0 0 chr2 11328085 11328209 -241928374 - FLAM_C SINE Alu -19 124 1 4035 175 22 21 chr2 11328214 11329095 -241927488 - L1MD1 LINE L1 -206 6036 5152 746 112 0 0 chr2 11329096 11329203 -241927380 - AluJb SINE Alu 0 312 206 1075 199 46 42 chr2 11329204 11329510 -241927073 - L1MD1 LINE L1 -974 5172 4866 275 271 164 7 chr2 11330751 11330891 -241925692 - L1ME4a LINE L1 -16 6105 5944 1829 96 13 80 chr2 11331100 11331272 -241925311 - AluSx SINE Alu -18 294 149 2160 104 10 0 chr2 11331272 11331571 -241925012 - AluSx SINE Alu -10 302 1 1829 96 13 80 chr2 11331571 11331700 -241924883 - AluSx SINE Alu -163 149 13 2083 111 0 0 chr2 11332517 11332806 -241923777 - AluSx SINE Alu -23 289 1 2376 84 0 0 chr2 11333018 11333329 -241923254 - AluSq SINE Alu -2 311 1 1738 172 0 3 chr2 11333332 11333634 -241922949 - AluJb SINE Alu -11 301 1 305 341 98 12 chr2 11333927 11334091 -241922492 - MIR SINE MIR -65 197 20 617 297 96 33 chr2 11334466 11334830 -241921753 - L1ME4a LINE L1 -339 5827 5441 2034 222 51 27 chr2 11334962 11335489 -241921094 - MER44D DNA MER2_type 0 605 11 1733 194 144 2 chr2 11335505 11335908 -241920675 - L1MB7 LINE L1 -16 6168 5709 193 303 110 46 chr2 11335936 11336045 -241920538 - MIR SINE MIR -9 253 138 2055 114 7 0 chr2 11336052 11336342 -241920241 - AluSx SINE Alu -19 293 2 22 35 0 0 chr2 11336629 11336658 -241919925 + AT_rich Low_complexity Low_complexity 1 29 0 1655 167 3 17 chr2 11336673 11336972 -241919611 + AluJb SINE Alu 1 295 -17 304 315 111 0 chr2 11337176 11337284 -241919299 - L2 LINE L2 -1 3312 3193 2098 85 18 0 chr2 11338249 11338531 -241918052 + AluSx SINE Alu 11 297 -15 2544 39 3 3 chr2 11339975 11340286 -241916297 - AluY SINE Alu 0 311 1 1471 247 44 43 chr2 11340374 11340675 -241915908 - L1MC5 LINE L1 -46 7915 7616 2063 187 6 3 chr2 11340675 11341039 -241915544 + MLT1A1 LTR MaLR 1 365 0 1471 247 44 43 chr2 11341039 11341345 -241915238 - L1MC5 LINE L1 -345 7616 7307 804 249 13 6 chr2 11341483 11341688 -241914895 - L1MC4 LINE L1 -733 7228 7043 360 203 24 17 chr2 11341797 11341974 -241914609 + CT-rich Low_complexity Low_complexity 1 178 0 497 209 0 14 chr2 11341991 11342130 -241914453 + CT-rich Low_complexity Low_complexity 2 138 0 1736 179 7 0 chr2 11342130 11342437 -241914146 - AluJo SINE Alu -3 309 1 198 0 0 0 chr2 11342882 11342904 -241913679 + (T)n Simple_repeat Simple_repeat 1 22 0 193 327 151 62 chr2 11344854 11345212 -241911371 + L2 LINE L2 2809 3198 -74 766 244 106 5 chr2 11346471 11346688 -241909895 - MIR SINE MIR -13 249 11 1992 96 7 4 chr2 11347290 11347598 -241908985 - AluY SINE Alu 0 309 1 2070 116 3 0 chr2 11347894 11348196 -241908387 - AluSx SINE Alu -9 303 1 1741 86 19 4 chr2 11348258 11348514 -241908069 - AluSq SINE Alu -53 260 1 475 275 47 7 chr2 11348756 11348905 -241907678 + MIR SINE MIR 82 236 -26 2249 97 3 0 chr2 11348978 11349288 -241907295 + AluSx SINE Alu 1 311 -1 2079 104 10 0 chr2 11350026 11350325 -241906258 - AluSx SINE Alu -10 302 1 317 260 67 80 chr2 11350380 11350530 -241906053 + MIR SINE MIR 50 197 -65 300 227 56 61 chr2 11350804 11350982 -241905601 - HAL1 LINE L1 -121 2386 2208 1845 152 24 3 chr2 11350982 11351272 -241905311 + AluJo SINE Alu 1 296 -16 300 227 56 61 chr2 11351272 11351291 -241905292 - HAL1 LINE L1 -299 2208 2190 339 261 0 0 chr2 11351341 11351475 -241905108 + (CA)n Simple_repeat Simple_repeat 1 134 0 253 230 0 40 chr2 11351477 11351551 -241905032 - HAL1 LINE L1 -285 2222 2152 1846 243 161 14 chr2 11351597 11352334 -241904249 - HAL1 LINE L1 -485 2022 1177 1065 245 243 54 chr2 11352669 11353019 -241903564 - HAL1 LINE L1 -1324 1183 900 2176 119 10 3 chr2 11353019 11353330 -241903253 + AluSq SINE Alu 1 313 0 1065 245 243 54 chr2 11353330 11353974 -241902609 - HAL1 LINE L1 -1607 900 1 403 248 19 9 chr2 11354340 11354445 -241902138 + HAL1 LINE L1 742 847 -1660 536 58 0 0 chr2 11354789 11354858 -241901725 + tRNA-Glu-GAG tRNA tRNA 7 75 0 215 258 32 16 chr2 11355134 11355196 -241901387 - MIR SINE MIR -118 144 82 208 281 16 0 chr2 11355558 11355622 -241900961 + MIR SINE MIR 83 147 -61 2713 20 3 0 chr2 11355811 11356108 -241900475 + AluY SINE Alu 1 298 -13 1553 146 120 18 chr2 11356312 11356587 -241899996 + AluJb SINE Alu 1 303 -9 343 279 57 59 chr2 11357886 11358381 -241898202 + L1M4 LINE L1 2735 3228 -2918 338 281 60 126 chr2 11358388 11358635 -241897948 + L1ME4a LINE L1 5745 5958 -163 1543 173 55 14 chr2 11358635 11358981 -241897602 + L1MB8 LINE L1 5819 6178 0 338 281 60 126 chr2 11358981 11359131 -241897452 + L1ME4a LINE L1 5958 6116 -5 185 338 54 0 chr2 11363107 11363181 -241893402 + L3 LINE CR1 1023 1100 -477 513 326 28 11 chr2 11363185 11363363 -241893220 - MIR3 SINE MIR -12 196 16 2346 116 0 0 chr2 11363500 11363801 -241892782 + AluSq SINE Alu 1 301 -12 462 35 0 0 chr2 11364275 11364332 -241892251 + U2 snRNA snRNA 1 57 -131 2485 79 0 3 chr2 11364443 11364746 -241891837 - AluSq SINE Alu -11 302 1 904 78 0 0 chr2 11364746 11364861 -241891722 - 5S rRNA rRNA -6 115 1 257 336 21 28 chr2 11364935 11365078 -241891505 + MIR SINE MIR 2 143 -119 228 306 189 14 chr2 11365202 11365368 -241891215 + MIR SINE MIR 2 197 -56 2452 92 7 0 chr2 11366050 11366354 -241890229 - AluSx SINE Alu -6 306 1 294 278 0 11 chr2 11366677 11366762 -241889821 + MIR SINE MIR 63 143 -65 232 167 24 0 chr2 11366791 11366833 -241889750 - L2 LINE L2 -13 3300 3258 509 251 34 58 chr2 11367017 11367224 -241889359 - L2 LINE L2 -188 3084 2883 671 150 24 16 chr2 11367480 11367607 -241888976 + FLAM_A SINE Alu 1 128 -5 2009 157 36 14 chr2 11367834 11368190 -241888393 - THE1B LTR MaLR 0 364 1 297 294 119 0 chr2 11368195 11368304 -241888279 + MIR SINE MIR 27 148 -114 2058 135 7 0 chr2 11369116 11369397 -241887186 - AluSx SINE Alu -29 283 1 2117 120 0 3 chr2 11370185 11370505 -241886078 - AluSx SINE Alu 0 319 1 304 258 150 8 chr2 11370507 11370627 -241885956 - MIR SINE MIR -97 165 29 187 314 209 0 chr2 11370899 11371004 -241885579 + MIR3 SINE MIR 30 156 -52 213 300 17 0 chr2 11372574 11372634 -241883949 - L2 LINE L2 -235 3037 2977 341 299 157 6 chr2 11372658 11372849 -241883734 - MIR SINE MIR 0 262 46 863 252 37 47 chr2 11373057 11373207 -241883376 - L1MC5 LINE L1 -114 7847 7697 2073 135 27 0 chr2 11373207 11373503 -241883080 + AluSq SINE Alu 1 304 -9 863 252 37 47 chr2 11373503 11373757 -241882826 - L1MC5 LINE L1 -264 7697 7447 2471 64 0 3 chr2 11374793 11375091 -241881492 - AluY SINE Alu -14 297 1 211 407 8 0 chr2 11375566 11375684 -241880899 - MIR3 SINE MIR -7 201 83 410 287 19 93 chr2 11375882 11376098 -241880485 + MIR SINE MIR 49 248 -14 242 282 129 2 chr2 11376116 11376214 -241880369 - MIR SINE MIR -68 140 33 1554 131 0 14 chr2 11379184 11379405 -241877178 + AluSq SINE Alu 83 300 -13 2122 113 3 0 chr2 11379834 11380147 -241876436 + AluSx SINE Alu 1 314 0 682 230 78 10 chr2 11380239 11380443 -241876140 + MER20 DNA MER1_type 2 219 0 216 324 14 0 chr2 11380850 11380921 -241875662 - L2 LINE L2 -5 3267 3196 229 326 35 28 chr2 11381874 11382015 -241874568 - MIR SINE MIR -34 228 87 482 323 25 6 chr2 11382379 11382537 -241874046 + MIR SINE MIR 38 198 -64 792 272 38 0 chr2 11382556 11382769 -241873814 - MIR SINE MIR -24 238 18 2471 116 8 0 chr2 11382978 11383339 -241873244 - THE1B LTR MaLR 0 364 1 216 292 0 0 chr2 11383497 11383610 -241872973 + (TG)n Simple_repeat Simple_repeat 2 114 0 267 333 175 6 chr2 11384234 11384417 -241872166 + MIR SINE MIR 15 228 -34 213 284 168 0 chr2 11384475 11384570 -241872013 - L2 LINE L2 -256 3057 2947 332 258 54 0 chr2 11384797 11384890 -241871693 - MIR3 SINE MIR -7 201 104 213 320 41 67 chr2 11386616 11386658 -241869925 - MER5A DNA MER1_type 0 189 147 2340 99 3 0 chr2 11386658 11386951 -241869632 + AluSq SINE Alu 1 294 -19 213 320 41 67 chr2 11386951 11387102 -241869481 - MER5A DNA MER1_type -42 147 1 487 309 30 24 chr2 11387111 11387279 -241869304 - MER5B DNA MER1_type -2 176 8 208 238 0 0 chr2 11387615 11387657 -241868926 + (ATG)n Simple_repeat Simple_repeat 1 42 0 1005 36 0 0 chr2 11387795 11387905 -241868678 + 7SLRNA srpRNA srpRNA 91 200 -120 204 216 0 0 chr2 11388271 11388322 -241868261 + (TG)n Simple_repeat Simple_repeat 2 52 0 348 380 30 4 chr2 11388330 11388564 -241868019 + L3 LINE CR1 1336 1575 -2 212 301 124 9 chr2 11389121 11389234 -241867349 - L2 LINE L2 -1 3271 3146 267 252 50 101 chr2 11390326 11390485 -241866098 + MER5A DNA MER1_type 3 153 -36 432 0 0 0 chr2 11390627 11390675 -241865908 + (CA)n Simple_repeat Simple_repeat 2 49 0 252 356 11 0 chr2 11390734 11390824 -241865759 - MIR SINE MIR -122 140 50 2239 110 3 10 chr2 11390876 11391176 -241865407 + AluSx SINE Alu 1 298 -14 241 233 151 27 chr2 11391374 11391447 -241865136 + MIR3 SINE MIR 81 162 -46 494 289 263 25 chr2 11392066 11393102 -241863481 - L2 LINE L2 -15 3298 2013 488 307 151 9 chr2 11393340 11393659 -241862924 + L2 LINE L2 2854 3217 -96 419 305 175 7 chr2 11393789 11394081 -241862502 - L2 LINE L2 -1297 2017 1677 183 291 157 37 chr2 11394159 11394293 -241862290 - MIR SINE MIR -64 198 49 291 316 107 43 chr2 11394360 11394594 -241861989 + L1ME LINE L1 5341 5589 -532 222 37 0 0 chr2 11395109 11395136 -241861447 + (T)n Simple_repeat Simple_repeat 1 27 0 23 0 0 0 chr2 11395261 11395284 -241861299 + AT_rich Low_complexity Low_complexity 1 23 0 1888 115 70 4 chr2 11396425 11396695 -241859888 - AluJb SINE Alu -24 288 1 315 299 73 15 chr2 11396696 11396833 -241859750 - L2 LINE L2 0 3313 3169 1873 149 3 24 chr2 11396939 11397235 -241859348 - AluJo SINE Alu -21 291 2 2344 120 0 0 chr2 11397280 11397581 -241859002 - AluSx SINE Alu -11 301 1 2352 91 0 7 chr2 11397611 11397920 -241858663 - AluY SINE Alu -4 307 1 29 0 0 0 chr2 11397920 11397949 -241858634 + AT_rich Low_complexity Low_complexity 1 29 0 332 340 137 0 chr2 11397983 11398136 -241858447 - MIR SINE MIR -19 243 70 207 292 52 117 chr2 11398685 11398993 -241857590 + L2 LINE L2 2977 3264 -8 281 330 44 0 chr2 11401018 11401109 -241855474 - MIR SINE MIR -61 147 53 218 314 14 0 chr2 11401487 11401557 -241855026 + L2 LINE L2 3201 3271 -1 304 281 42 99 chr2 11401943 11402135 -241854448 - MIR3 SINE MIR -24 184 4 1349 111 0 0 chr2 11402256 11402436 -241854147 - AluY SINE Alu -2 309 130 2667 49 0 3 chr2 11402438 11402746 -241853837 - AluY SINE Alu -4 307 1 497 276 99 58 chr2 11404600 11404843 -241851740 - MIR SINE MIR -4 258 6 691 318 17 9 chr2 11405832 11406065 -241850518 - MIR SINE MIR -12 250 16 327 268 49 0 chr2 11406078 11406160 -241850423 - MIR SINE MIR -62 146 61 256 355 103 0 chr2 11406371 11406478 -241850105 + MER103 DNA DNA 2 119 -47 726 326 26 0 chr2 11406729 11406962 -241849621 - MIR SINE MIR -22 240 2 184 296 19 0 chr2 11407038 11407092 -241849491 + MIR SINE MIR 87 141 -67 660 286 162 0 chr2 11407163 11407373 -241849210 + MIR SINE MIR 17 260 -2 426 262 19 9 chr2 11407523 11407630 -241848953 - MIR3 SINE MIR -32 176 69 294 29 0 0 chr2 11408068 11408103 -241848480 + (T)n Simple_repeat Simple_repeat 1 35 0 2389 104 0 0 chr2 11408152 11408450 -241848133 - AluSg SINE Alu -12 298 1 2580 219 68 18 chr2 11408517 11408971 -241847612 - L1ME1 LINE L1 -134 6101 5602 1183 210 17 17 chr2 11408971 11409209 -241847374 + MER8 DNA MER2_type 2 239 0 2580 219 68 18 chr2 11409209 11409419 -241847164 - L1ME1 LINE L1 -633 5602 5404 693 241 14 0 chr2 11409411 11409663 -241846920 - L1ME1 LINE L1 -3712 2503 2240 * 2275 100 0 0 chr2 11409685 11410007 -241846576 - AluSc SINE Alu 0 322 1 1272 186 73 0 chr2 11410046 11410266 -241846317 - AluJo SINE Alu -48 264 29 366 222 0 0 chr2 11410271 11410352 -241846231 - L1ME1 LINE L1 -5250 1146 1066 304 231 0 0 chr2 11410482 11410534 -241846049 - L1MC4 LINE L1 -1339 6703 6652 409 228 53 32 chr2 11410539 11410682 -241845901 - L1MC4 LINE L1 -1339 6983 1932 355 171 26 13 chr2 11410740 11410816 -241845767 - MLT1K LTR MaLR -2 586 510 3565 228 70 16 chr2 11411175 11412163 -241844420 - L1ME1 LINE L1 -5321 1075 35 1689 122 0 17 chr2 11412228 11412498 -241844085 - AluSx SINE Alu 0 322 57 285 180 0 0 chr2 11413380 11413430 -241843153 - L2 LINE L2 -2 3311 3262 1679 174 28 0 chr2 11414298 11414580 -241842003 - AluJo SINE Alu -12 300 11 242 188 0 0 chr2 11414736 11414784 -241841799 + L2 LINE L2 3247 3294 -19 2391 94 0 0 chr2 11414897 11415195 -241841388 + AluSx SINE Alu 1 298 -14 204 322 66 13 chr2 11415676 11415828 -241840755 + MER91B DNA MER1_type 27 186 -4 446 317 0 25 chr2 11416335 11416496 -241840087 - MIR SINE MIR -3 259 103 405 306 0 41 chr2 11417082 11417111 -241839472 - MIR SINE MIR -72 190 161 2378 103 0 0 chr2 11417111 11417412 -241839171 - AluSx SINE Alu -11 301 1 405 306 0 41 chr2 11417412 11417529 -241839054 - MIR SINE MIR -101 161 50 180 0 0 0 chr2 11417536 11417556 -241839027 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2208 54 0 0 chr2 11417558 11417817 -241838766 - AluY SINE Alu -21 290 32 220 171 0 0 chr2 11418938 11418979 -241837604 + MIR SINE MIR 107 147 -115 494 330 63 33 chr2 11422540 11422857 -241833726 - L1MC/D LINE L1 -743 5403 5188 2375 82 0 0 chr2 11422956 11423249 -241833334 - AluSc SINE Alu -4 305 13 216 268 122 0 chr2 11424993 11425075 -241831508 + MIR SINE MIR 124 215 -47 2056 145 0 0 chr2 11425078 11425367 -241831216 - AluSx SINE Alu -23 289 1 6145 154 50 18 chr2 11426056 11426595 -241829988 + Tigger3b DNA MER2_type 2 523 -2505 2215 109 6 40 chr2 11426595 11426916 -241829667 + AluSx SINE Alu 1 310 -2 6145 154 50 18 chr2 11426916 11427325 -241829258 + Tigger3b DNA MER2_type 523 918 -2110 2479 92 0 0 chr2 11427325 11427631 -241828952 - AluSq SINE Alu -7 306 1 6145 154 50 18 chr2 11427631 11427702 -241828881 + Tigger3b DNA MER2_type 918 985 -2043 1363 89 84 5 chr2 11427702 11427915 -241828668 - MER30 DNA MER1_type 0 230 1 6145 154 50 18 chr2 11427915 11428086 -241828497 + Tigger3b DNA MER2_type 985 1231 0 1999 122 47 36 chr2 11428779 11429139 -241827444 - THE1B LTR MaLR 0 364 1 2367 119 0 0 chr2 11429292 11429602 -241826981 + AluSx SINE Alu 1 310 -2 188 318 0 0 chr2 11430371 11430415 -241826168 - L2 LINE L2 -8 3305 3262 256 220 0 17 chr2 11430565 11430624 -241825959 - L2 LINE L2 -19 3294 3237 311 227 15 0 chr2 11432389 11432455 -241824128 + MIR SINE MIR 110 176 -86 426 326 63 27 chr2 11433232 11433453 -241823130 + MIR SINE MIR 24 252 -10 524 281 12 24 chr2 11433509 11433676 -241822907 - L1MC5 LINE L1 -68 7893 7729 1261 247 162 5 chr2 11434463 11434876 -241821707 - MLT1H LTR MaLR -71 478 1 2285 119 3 0 chr2 11435314 11435624 -241820959 - AluSx SINE Alu -1 311 1 2559 62 0 7 chr2 11436267 11436575 -241820008 + AluY SINE Alu 1 306 -5 376 297 108 18 chr2 11436616 11436838 -241819745 - L1ME3A LINE L1 -18 6152 5911 247 306 171 9 chr2 11436840 11436951 -241819632 + MIR SINE MIR 114 242 -20 294 306 33 33 chr2 11437761 11437882 -241818701 + MIR SINE MIR 20 140 -122 422 256 0 0 chr2 11439700 11439786 -241816797 + G-rich Low_complexity Low_complexity 89 174 0 618 245 0 0 chr2 11439786 11440089 -241816494 + (CAGAGA)n Simple_repeat Simple_repeat 1 303 0 505 246 62 25 chr2 11490892 11491097 -241765486 - MIR SINE MIR -1 261 44 6730 92 16 16 chr2 11491668 11492752 -241763831 + SVA Other Other 433 1360 -26 661 11 0 23 chr2 11492752 11492840 -241763743 + (GAAA)n Simple_repeat Simple_repeat 4 89 0 236 315 56 19 chr2 11492840 11492948 -241763635 + MIR3 SINE MIR 74 185 -23 197 278 130 9 chr2 11493044 11493152 -241763431 - MIR3 SINE MIR -31 177 57 3111 160 25 27 chr2 11493475 11494076 -241762507 + L1MB2 LINE L1 5444 6043 -128 472 111 0 0 chr2 11494076 11494145 -241762438 + L1MB3 LINE L1 6107 6178 -5 309 240 106 84 chr2 11494355 11494430 -241762153 + L1ME4a LINE L1 5835 5907 -214 2471 77 3 3 chr2 11494430 11494740 -241761843 - AluY SINE Alu -1 310 1 309 240 106 84 chr2 11494740 11494843 -241761740 + L1ME4a LINE L1 5907 6017 -104 217 292 45 11 chr2 11495044 11495133 -241761450 + L3 LINE CR1 1483 1574 -3 580 255 71 38 chr2 11495512 11495696 -241760887 + MIR SINE MIR 1 190 -72 2369 202 56 54 chr2 11497470 11498132 -241758451 - MER21B LTR ERV1 -58 805 143 357 149 9 167 chr2 11498270 11498384 -241758199 - MER21B LTR ERV1 -767 96 1 238 307 104 50 chr2 11498571 11498773 -241757810 - L2 LINE L2 -1047 2267 2055 180 0 0 0 chr2 11499557 11499577 -241757006 + (GTGTG)n Simple_repeat Simple_repeat 1 20 0 306 295 132 39 chr2 11499717 11500189 -241756394 - L1MC/D LINE L1 -302 5819 5317 2866 0 0 0 chr2 11500212 11500509 -241756074 - AluYa5 SINE Alu -14 297 1 203 333 0 27 chr2 11502547 11502622 -241753961 - MIR SINE MIR -120 88 16 2546 43 33 7 chr2 11502744 11503044 -241753539 - AluY SINE Alu -3 308 1 2304 103 0 0 chr2 11503498 11503798 -241752785 - AluY SINE Alu -11 300 1 1834 112 38 45 chr2 11504154 11504468 -241752115 - AluSx SINE Alu 0 312 1 25 0 0 0 chr2 11505106 11505131 -241751452 + GC_rich Low_complexity Low_complexity 1 25 0 217 73 24 24 chr2 11505263 11505304 -241751279 + (CGGGGG)n Simple_repeat Simple_repeat 1 41 0 616 313 66 28 chr2 11505926 11506142 -241750441 - L2 LINE L2 -235 3037 2831 1745 165 0 3 chr2 11506142 11506433 -241750150 - AluJo SINE Alu -22 290 1 616 313 66 28 chr2 11506433 11506679 -241749904 - L2 LINE L2 -441 2831 2480 267 279 13 13 chr2 11508675 11508754 -241747829 - L2 LINE L2 -44 3228 3150 218 209 224 0 chr2 11509474 11509541 -241747042 - MIR3 SINE MIR -21 187 106 848 144 14 7 chr2 11509541 11509680 -241746903 - MER7A DNA MER2_type -208 138 1 252 250 201 61 chr2 11509708 11509872 -241746711 + MIR SINE MIR 15 201 -61 289 61 0 0 chr2 11509966 11510004 -241746579 + AluJ/FLAM SINE Alu 67 100 -202 526 105 35 35 chr2 11510004 11510019 -241746564 - AluJb SINE Alu -165 147 133 1493 86 5 0 chr2 11510019 11510246 -241746337 - AluY SINE Alu 0 311 84 526 105 35 35 chr2 11510246 11510315 -241746268 - AluJb SINE Alu -178 134 62 1688 158 0 11 chr2 11511109 11511432 -241745151 - AluSx SINE Alu 0 348 29 2948 176 4 23 chr2 11511448 11511965 -241744618 + MLT2B2 LTR ERVL 1 507 -8 1506 234 20 8 chr2 11512009 11512406 -241744177 - L1MEc LINE L1 -5455 941 540 526 203 155 35 chr2 11512412 11512644 -241743939 - MLT1F1 LTR MaLR -13 554 295 2232 83 0 0 chr2 11513666 11513956 -241742627 + AluY SINE Alu 1 290 -21 202 214 14 57 chr2 11514651 11514721 -241741862 + GA-rich Low_complexity Low_complexity 1 67 0 2308 74 3 0 chr2 11515271 11515581 -241741002 + AluYa5 SINE Alu 1 311 0 238 312 43 36 chr2 11516480 11516618 -241739965 + L2 LINE L2 2684 2822 -492 2678 209 149 66 chr2 11516982 11518118 -241738465 - L1MC4a LINE L1 -155 7653 6424 322 182 0 30 chr2 11518118 11518184 -241738399 - MER2 DNA MER2_type 0 345 282 * 341 203 13 38 chr2 11518157 11518236 -241738347 - MER8 DNA MER2_type -60 179 103 594 272 48 37 chr2 11518257 11518525 -241738058 - L1MC3 LINE L1 -1454 6331 6061 778 217 81 72 chr2 11518534 11518688 -241737895 - L1MCc LINE L1 -4034 3088 2937 1525 165 36 11 chr2 11518688 11518967 -241737616 - AluJb SINE Alu -26 286 1 778 217 81 72 chr2 11518967 11519158 -241737425 - L1MCc LINE L1 -4185 2937 2740 * 1643 93 4 0 chr2 11519145 11519381 -241737202 - L1P LINE L1 -846 5300 5064 1845 53 4 29 chr2 11519381 11519625 -241736958 + L1PA8 LINE L1 5934 6171 -1 321 320 92 7 chr2 11519627 11519780 -241736803 - L1MCc LINE L1 -4366 2756 2591 906 254 5 20 chr2 11519782 11519983 -241736600 + MER58A DNA MER1_type 3 200 -24 311 180 26 203 chr2 11519987 11520298 -241736285 - L1MCc LINE L1 -4870 2102 1826 1347 226 80 75 chr2 11520336 11521333 -241735250 - L1MCc LINE L1 -4914 1509 821 6795 63 10 27 chr2 11521368 11522410 -241734173 - L1PA8 LINE L1 -16 6156 5111 814 244 29 29 chr2 11522418 11522664 -241733919 - Charlie4 DNA MER1_type -1698 263 18 344 223 54 95 chr2 11522762 11522910 -241733673 + MIR SINE MIR 110 251 -11 276 30 0 0 chr2 11523171 11523204 -241733379 + (TC)n Simple_repeat Simple_repeat 2 34 0 216 67 0 0 chr2 11523203 11523233 -241733350 + (TG)n Simple_repeat Simple_repeat 1 30 0 * 1987 123 14 0 chr2 11523791 11524083 -241732500 - AluSx SINE Alu -16 296 1 384 312 9 9 chr2 11524219 11524328 -241732255 - MIR SINE MIR -81 127 19 2440 186 53 28 chr2 11524660 11525202 -241731381 - MER67C LTR ERV1 -153 557 2 2349 86 0 0 chr2 11525301 11525602 -241730981 + AluSx SINE Alu 1 301 -11 1638 186 46 25 chr2 11526519 11526885 -241729698 - MLT1A2 LTR MaLR 0 374 1 7438 45 3 1 chr2 11527373 11528687 -241727896 + L1PA7 LINE L1 4838 6154 0 1072 233 137 22 chr2 11528774 11529220 -241727363 + L1MEc LINE L1 36 532 -5864 492 264 66 47 chr2 11529247 11529505 -241727078 + MLT1F1 LTR MaLR 16 278 -289 234 0 0 0 chr2 11529629 11529655 -241726928 + (TA)n Simple_repeat Simple_repeat 1 26 0 204 250 100 25 chr2 11529703 11529726 -241726857 + L2 LINE L2 3129 3149 -164 1529 170 22 7 chr2 11529726 11529997 -241726586 - AluJb SINE Alu -37 275 1 204 250 100 25 chr2 11529997 11530093 -241726490 + L2 LINE L2 3149 3257 -56 1162 228 127 38 chr2 11531442 11531895 -241724688 - MLT1G1 LTR MaLR -5 588 76 3118 182 102 5 chr2 11531895 11532311 -241724272 - MER72 LTR ERV1 0 722 217 278 0 54 0 chr2 11532311 11532348 -241724235 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3118 182 102 5 chr2 11532348 11532585 -241723998 - MER72 LTR ERV1 -505 217 5 1162 228 127 38 chr2 11532585 11532669 -241723914 - MLT1G1 LTR MaLR -517 76 1 335 326 65 0 chr2 11532849 11532987 -241723596 + MIR3 SINE MIR 33 179 -29 420 110 0 132 chr2 11532989 11533080 -241723503 + MADE1 DNA Mariner 1 79 -1 3795 175 43 59 chr2 11533776 11534205 -241722378 - L1MB8 LINE L1 -2 6176 5742 2431 68 0 0 chr2 11534205 11534515 -241722068 + AluY SINE Alu 1 310 -1 3795 175 43 59 chr2 11534515 11534947 -241721636 - L1MB8 LINE L1 -436 5742 5348 204 40 0 0 chr2 11534947 11534972 -241721611 + (TG)n Simple_repeat Simple_repeat 2 26 0 3795 175 43 59 chr2 11534972 11535281 -241721302 - L1MB8 LINE L1 -830 5348 5036 3418 119 50 4 chr2 11537342 11537845 -241718738 - MER1A DNA MER1_type 0 527 2 535 209 43 35 chr2 11539908 11540111 -241716472 + MER106A DNA MER1_type 3 236 0 1368 189 9 39 chr2 11540439 11540772 -241715811 - MER33 DNA MER1_type -1 323 1 319 173 34 45 chr2 11541380 11541559 -241715024 + (TA)n Simple_repeat Simple_repeat 1 177 0 807 265 62 0 chr2 11543067 11543278 -241713305 + MER58A DNA MER1_type 1 224 0 2207 100 0 0 chr2 11545432 11545731 -241710852 - AluSx SINE Alu -13 299 1 525 277 110 7 chr2 11546166 11546385 -241710198 + MIR SINE MIR 16 252 -10 216 97 0 0 chr2 11546663 11546694 -241709889 + (TGAG)n Simple_repeat Simple_repeat 1 31 0 667 203 65 55 chr2 11547176 11547393 -241709190 - L1ME3A LINE L1 -10 6160 5942 368 186 14 0 chr2 11547394 11547464 -241709119 - L1ME3A LINE L1 -312 5858 5788 227 296 41 51 chr2 11548226 11548324 -241708259 - MIR3 SINE MIR -9 199 103 2216 96 3 0 chr2 11549004 11549306 -241707277 + AluSx SINE Alu 1 303 -9 370 308 107 0 chr2 11551565 11551734 -241704849 - MIR SINE MIR -52 210 24 653 132 25 0 chr2 11552022 11552143 -241704440 + L1MB4 LINE L1 6057 6180 0 2175 82 13 0 chr2 11552213 11552516 -241704067 + AluY SINE Alu 1 307 -4 620 253 3 0 chr2 11553814 11554147 -241702436 + (TG)n Simple_repeat Simple_repeat 1 334 0 320 269 113 38 chr2 11554135 11554295 -241702288 - L1MEd LINE L1 -5402 717 546 * 251 283 170 0 chr2 11554753 11554859 -241701724 - MLT1L LTR MaLR -7 608 485 485 243 94 28 chr2 11554972 11555153 -241701430 - MLT1L LTR MaLR -384 231 39 352 283 71 15 chr2 11555278 11555476 -241701107 - L1M4 LINE L1 -1310 4836 4628 256 172 35 0 chr2 11556941 11556999 -241699584 + MIR SINE MIR 89 148 -114 291 157 0 0 chr2 11557375 11557426 -241699157 + T-rich Low_complexity Low_complexity 1 51 0 562 339 25 29 chr2 11558216 11558493 -241698090 + HERVL LTR ERVL 4739 5014 -640 2226 122 23 0 chr2 11558493 11558796 -241697787 + AluSx SINE Alu 1 310 -2 920 223 110 43 chr2 11559340 11559685 -241696898 + LTR16A1 LTR ERVL 90 457 0 1572 199 41 33 chr2 11560133 11560355 -241696228 - MLT1A1 LTR MaLR 0 365 137 1927 141 44 44 chr2 11560355 11560718 -241695865 + THE1B LTR MaLR 1 363 -1 1572 199 41 33 chr2 11560718 11560857 -241695726 - MLT1A1 LTR MaLR -228 137 1 395 271 132 0 chr2 11561064 11561208 -241695375 - MIR SINE MIR -11 251 89 1004 215 121 69 chr2 11561255 11561660 -241694923 - MLT1H LTR MaLR 0 549 124 878 244 104 92 chr2 11561799 11562552 -241694031 - L1ME4a LINE L1 -23 6098 5337 312 271 59 17 chr2 11563458 11563576 -241693007 + MIR SINE MIR 11 133 -129 557 238 116 45 chr2 11564212 11564565 -241692018 + MLT1I LTR MaLR 3 407 -2 2044 119 3 48 chr2 11564660 11564970 -241691613 - AluSq SINE Alu -17 296 1 417 330 36 26 chr2 11565151 11565345 -241691238 - MIR SINE MIR -21 241 46 1633 143 87 3 chr2 11565441 11565727 -241690856 + AluJo SINE Alu 1 310 -2 204 329 106 58 chr2 11565728 11565935 -241690648 + L2 LINE L2 3036 3252 -20 926 235 21 21 chr2 11565999 11566242 -241690341 + MIR SINE MIR 1 243 -19 253 268 175 0 chr2 11566386 11566483 -241690100 + MIR3 SINE MIR 2 115 -93 335 158 20 48 chr2 11568311 11568457 -241688126 + C-rich Low_complexity Low_complexity 3 144 0 614 305 88 44 chr2 11568534 11569033 -241687550 + LTR33 LTR ERVL 1 521 0 225 325 13 0 chr2 11569145 11569222 -241687361 - L3 LINE CR1 -440 1137 1060 1965 204 71 14 chr2 11569222 11569731 -241686852 - MER67A LTR ERV1 0 543 6 268 328 25 17 chr2 11570087 11570206 -241686377 + CT-rich Low_complexity Low_complexity 5 124 0 327 288 27 18 chr2 11571627 11571738 -241684845 + MIR SINE MIR 36 147 -61 196 317 0 0 chr2 11571914 11571974 -241684609 - MIR3 SINE MIR -5 203 144 183 286 43 29 chr2 11572044 11572114 -241684469 + MIR SINE MIR 72 142 -66 2054 136 3 3 chr2 11572284 11572601 -241683982 - AluSg SINE Alu 0 310 3 198 295 267 23 chr2 11572624 11572841 -241683742 - L3 LINE CR1 -222 1355 1086 1975 69 8 2 chr2 11572862 11573127 -241683456 - L1MC/D LINE L1 -598 5556 5320 180 333 0 0 chr2 11573568 11573616 -241682967 + MIR SINE MIR 84 131 -77 2137 118 0 20 chr2 11573624 11573930 -241682653 - AluY SINE Alu -11 300 1 491 237 129 46 chr2 11574291 11574485 -241682098 - MIR SINE MIR -1 261 52 44678 43 5 2 chr2 11574657 11580798 -241675785 - L1PA4 LINE L1 0 6155 1 2222 127 3 0 chr2 11580801 11581109 -241675474 - AluSc SINE Alu 0 309 1 297 0 0 0 chr2 11581418 11581451 -241675132 + (TG)n Simple_repeat Simple_repeat 2 34 0 37 62 0 0 chr2 11581584 11581649 -241674934 + AT_rich Low_complexity Low_complexity 1 65 0 294 314 81 33 chr2 11582349 11582559 -241674024 + HAL1b LINE L1 310 529 -819 189 315 16 55 chr2 11583165 11583292 -241673291 + MIR SINE MIR 138 259 -3 269 309 34 40 chr2 11583862 11584011 -241672572 + MIR SINE MIR 38 185 -77 365 298 54 30 chr2 11584324 11584553 -241672030 + MIR SINE MIR 27 262 0 512 195 44 18 chr2 11585237 11585350 -241671233 - MER45A DNA AcHobo -4 174 59 185 236 146 24 chr2 11585394 11585517 -241671066 + L2 LINE L2 2953 3090 -182 368 253 0 21 chr2 11585775 11585870 -241670713 - L2 LINE L2 -181 3091 2999 237 314 82 102 chr2 11586065 11586241 -241670342 - L2 LINE L2 -557 2757 2579 1828 142 7 37 chr2 11586241 11586536 -241670047 + AluJb SINE Alu 3 288 -24 237 314 82 102 chr2 11586536 11586917 -241669666 - L2 LINE L2 -735 2579 2211 25 0 0 0 chr2 11586996 11587021 -241669562 + AT_rich Low_complexity Low_complexity 1 25 0 2031 183 96 26 chr2 11587182 11587519 -241669064 - MLT1D LTR MaLR -2 503 124 2485 83 39 30 chr2 11587519 11587880 -241668703 + THE1B LTR MaLR 1 364 0 2031 183 96 26 chr2 11587880 11588000 -241668583 - MLT1D LTR MaLR -381 124 14 1866 177 93 75 chr2 11588458 11588794 -241667789 + MLT2B1 LTR ERVL 1 350 -170 2306 113 3 3 chr2 11588794 11589104 -241667479 - AluSq SINE Alu -3 310 1 1866 177 93 75 chr2 11589104 11589270 -241667313 + MLT2B1 LTR ERVL 350 512 -8 206 262 26 37 chr2 11589414 11589535 -241667048 - MER5A DNA MER1_type -59 119 5 2048 125 0 0 chr2 11590378 11590709 -241665874 + AluSx SINE Alu 1 331 0 221 356 23 0 chr2 11590859 11590946 -241665637 - MIR SINE MIR -116 146 58 434 248 50 28 chr2 11591070 11591211 -241665372 - MIR SINE MIR -70 192 49 1885 106 99 7 chr2 11592057 11592330 -241664253 + AluSx SINE Alu 5 302 -10 205 222 28 69 chr2 11592384 11592456 -241664127 - MIR SINE MIR -106 102 34 181 370 11 11 chr2 11592901 11592993 -241663590 - MIR SINE MIR -96 112 21 1876 156 7 0 chr2 11593719 11594008 -241662575 - AluSx SINE Alu -19 293 3 313 336 209 16 chr2 11594146 11594973 -241661610 + L2 LINE L2 1977 2963 -351 218 330 54 43 chr2 11595074 11595259 -241661324 + L2 LINE L2 3117 3303 -10 361 310 138 0 chr2 11596062 11596236 -241660347 - MIR SINE MIR -24 238 41 200 236 73 0 chr2 11596908 11596963 -241659620 + MIR SINE MIR 52 110 -152 220 277 0 0 chr2 11597097 11597174 -241659409 + (ATG)n Simple_repeat Simple_repeat 1 77 0 214 330 0 11 chr2 11598194 11598285 -241658298 + MIR SINE MIR 29 118 -144 288 203 116 0 chr2 11598560 11598629 -241657954 + MIR SINE MIR 83 159 -103 2850 91 15 13 chr2 11598814 11599210 -241657373 + THE1C-int LTR MaLR 1184 1580 0 1081 155 40 44 chr2 11599210 11599462 -241657121 + THE1C LTR MaLR 1 251 -124 1607 118 47 40 chr2 11599566 11599888 -241656695 + THE1C LTR MaLR 52 375 0 280 151 163 35 chr2 11601205 11601291 -241655292 - MIR3 SINE MIR -3 205 109 203 319 14 14 chr2 11601406 11601475 -241655108 - MIR SINE MIR -59 149 81 1357 152 9 0 chr2 11602037 11602248 -241654335 - AluSg/x SINE Alu -15 295 83 993 208 26 9 chr2 11602409 11602635 -241653948 - L1MA4 LINE L1 -781 5365 5136 * 5927 120 10 24 chr2 11602633 11603555 -241653028 + L1MA4 LINE L1 5392 6300 0 207 355 50 8 chr2 11607358 11607479 -241649104 - MIR SINE MIR -58 204 79 260 358 83 0 chr2 11607920 11608040 -241648543 - L2 LINE L2 0 3272 3143 755 141 0 41 chr2 11608099 11608220 -241648363 + FLAM_A SINE Alu 13 128 -14 709 282 8 103 chr2 11608573 11608942 -241647641 - L1MC4a LINE L1 -1978 5830 5497 23 0 0 0 chr2 11609143 11609166 -241647417 + AT_rich Low_complexity Low_complexity 1 23 0 2156 119 10 0 chr2 11610229 11610524 -241646059 + AluSx SINE Alu 1 298 -14 2381 85 3 0 chr2 11611060 11611353 -241645230 - AluSq SINE Alu -19 294 1 447 275 48 53 chr2 11611461 11611650 -241644933 + MIR3 SINE MIR 14 201 -7 187 238 191 48 chr2 11611734 11611818 -241644765 - L2 LINE L2 -38 3275 3180 265 280 97 0 chr2 11612280 11612373 -241644210 + MER20 DNA MER1_type 38 139 -80 2501 80 0 0 chr2 11613342 11613644 -241642939 + AluSc SINE Alu 1 302 -7 1103 275 91 63 chr2 11613839 11614908 -241641675 - L2 LINE L2 0 3313 2209 447 161 18 18 chr2 11614908 11615020 -241641563 - Charlie5 DNA MER1_type -116 2496 2385 301 229 12 0 chr2 11615163 11615246 -241641337 - Charlie5 DNA MER1_type -175 2437 2354 2354 105 3 0 chr2 11615270 11615576 -241641007 + AluSx SINE Alu 1 307 -5 859 336 34 26 chr2 11615626 11616120 -241640463 - L2 LINE L2 -1084 2230 1733 254 290 94 43 chr2 11617629 11617974 -241638609 - L2 LINE L2 -227 3086 2718 370 314 179 40 chr2 11618003 11618015 -241638568 - L2 LINE L2 -775 2539 2530 1718 139 45 35 chr2 11618015 11618303 -241638280 + AluJo SINE Alu 1 291 -21 370 314 179 40 chr2 11618303 11618513 -241638070 - L2 LINE L2 -784 2530 2286 235 331 41 0 chr2 11618536 11618657 -241637926 - L2 LINE L2 -1459 1855 1730 248 263 25 0 chr2 11618774 11618854 -241637729 - L1MC4 LINE L1 0 8042 7961 767 334 168 18 chr2 11618869 11619863 -241636720 - L2 LINE L2 -1612 1702 560 389 279 155 23 chr2 11620065 11620213 -241636370 + MIR SINE MIR 14 202 -60 2684 135 31 2 chr2 11620213 11620627 -241635956 - MSTB LTR MaLR 0 426 1 389 279 155 23 chr2 11620627 11620697 -241635886 + MIR SINE MIR 202 261 -1 2384 144 0 6 chr2 11620904 11621243 -241635340 - MER1B DNA MER1_type 0 337 1 1359 192 39 88 chr2 11621667 11621940 -241634643 + MLT1B LTR MaLR 4 252 -138 2115 119 68 34 chr2 11621940 11622003 -241634580 - THE1B LTR MaLR 0 364 305 1918 121 13 64 chr2 11622003 11622317 -241634266 + AluSx SINE Alu 1 298 -14 2115 119 68 34 chr2 11622317 11622605 -241633978 - THE1B LTR MaLR -59 305 1 1359 192 39 88 chr2 11622605 11622738 -241633845 + MLT1B LTR MaLR 252 390 0 229 260 0 41 chr2 11622840 11622913 -241633670 + L2 LINE L2 3015 3084 -188 530 236 39 48 chr2 11623091 11623299 -241633284 + L2 LINE L2 3108 3313 0 379 218 123 70 chr2 11623979 11624194 -241632389 + MIR SINE MIR 14 255 -7 183 329 93 14 chr2 11624857 11624997 -241631586 - L2 LINE L2 -177 3095 2945 297 0 0 0 chr2 11625164 11625197 -241631386 + (TG)n Simple_repeat Simple_repeat 2 34 0 291 194 32 0 chr2 11625821 11625883 -241630700 + MIR SINE MIR 89 152 -110 294 143 0 0 chr2 11626253 11626302 -241630281 + (T)n Simple_repeat Simple_repeat 1 49 0 562 320 33 29 chr2 11627090 11627365 -241629218 + HERVL LTR ERVL 4739 5014 -640 759 109 10 0 chr2 11627365 11627466 -241629117 + AluS SINE Alu 1 102 -210 297 259 50 114 chr2 11627566 11627617 -241628966 - L2 LINE L2 -1550 1764 1711 543 31 0 0 chr2 11627617 11627682 -241628901 + (TG)n Simple_repeat Simple_repeat 1 65 0 297 259 50 114 chr2 11627682 11627850 -241628733 - L2 LINE L2 -1603 1711 1559 257 239 103 51 chr2 11627911 11628028 -241628555 + MIR SINE MIR 92 214 -48 228 272 20 82 chr2 11628664 11628811 -241627772 + L2 LINE L2 2910 3047 -225 3382 54 0 5 chr2 11629878 11630307 -241626276 - L1PA8 LINE L1 0 6172 5746 1269 267 125 71 chr2 11630547 11630778 -241625805 - L1M4 LINE L1 -1014 5132 4915 2417 70 6 16 chr2 11630778 11631091 -241625492 + AluY SINE Alu 1 310 -1 1269 267 125 71 chr2 11631091 11632166 -241624417 - L1M4 LINE L1 -1231 4915 3737 285 29 0 0 chr2 11632166 11632200 -241624383 + (CA)n Simple_repeat Simple_repeat 2 35 0 1269 267 125 71 chr2 11632200 11632346 -241624237 - L1M4 LINE L1 -2409 3737 3600 276 262 12 24 chr2 11633285 11633369 -241623214 - MIR3 SINE MIR -16 192 110 801 71 10 0 chr2 11634366 11634464 -241622119 + AluS SINE Alu 1 99 -214 2370 92 0 0 chr2 11634702 11634995 -241621588 + AluSx SINE Alu 1 293 -19 1714 110 138 37 chr2 11635545 11635616 -241620967 - THE1B LTR MaLR -5 359 297 2148 114 3 62 chr2 11635616 11635941 -241620642 + AluSx SINE Alu 1 306 -6 1714 110 138 37 chr2 11635941 11636195 -241620388 - THE1B LTR MaLR -67 297 1 181 284 42 42 chr2 11636253 11636348 -241620235 + L3 LINE CR1 1478 1572 -5 199 273 195 47 chr2 11637319 11637447 -241619136 - MIR3 SINE MIR -49 159 13 582 296 94 22 chr2 11637477 11637700 -241618883 - MIR SINE MIR -18 244 6 21 0 0 0 chr2 11639884 11639905 -241616678 + AT_rich Low_complexity Low_complexity 1 21 0 661 99 0 0 chr2 11639914 11640005 -241616578 + AluSg/x SINE Alu 216 306 -6 2340 95 0 13 chr2 11642011 11642316 -241614267 + AluSq SINE Alu 1 301 -12 1068 144 11 29 chr2 11642424 11642598 -241613985 - FRAM SINE Alu -14 162 1 706 212 88 6 chr2 11643148 11643318 -241613265 + MER5A DNA MER1_type 3 186 -3 195 146 0 0 chr2 11643640 11643681 -241612902 + (TG)n Simple_repeat Simple_repeat 1 41 0 23 33 0 0 chr2 11644511 11644541 -241612042 + AT_rich Low_complexity Low_complexity 1 30 0 1943 120 62 17 chr2 11644621 11644912 -241611671 + AluSx SINE Alu 1 304 -8 266 349 92 13 chr2 11646079 11646231 -241610352 - Tigger8 DNA MER2_type -502 164 1 2214 121 0 22 chr2 11646431 11646746 -241609837 - AluSg SINE Alu -2 308 1 293 323 86 0 chr2 11646941 11647034 -241609549 - MIR SINE MIR -105 157 57 309 313 15 41 chr2 11647876 11648060 -241608523 + MLT1I LTR MaLR 64 248 -202 296 221 128 0 chr2 11648053 11648139 -241608444 + MLT1J2 LTR MaLR 285 381 -69 * 389 296 129 34 chr2 11648218 11648451 -241608132 - L2 LINE L2 -68 3245 2991 750 306 34 0 chr2 11648519 11648784 -241607799 - L2 LINE L2 -904 2410 2137 219 329 0 13 chr2 11649247 11649323 -241607260 + CT-rich Low_complexity Low_complexity 2 76 0 397 289 56 38 chr2 11649353 11649619 -241606964 - HAL1 LINE L1 -2 2505 2235 514 331 115 41 chr2 11649636 11649974 -241606609 - HAL1 LINE L1 -395 2112 1750 293 270 106 42 chr2 11649980 11650217 -241606366 - HAL1 LINE L1 -1453 1054 803 182 194 15 0 chr2 11650273 11650340 -241606243 + (TG)n Simple_repeat Simple_repeat 2 69 0 910 285 64 26 chr2 11650623 11650845 -241605738 + L2 LINE L2 1565 1777 -1537 1708 205 36 0 chr2 11650845 11651176 -241605407 - MER2 DNA MER2_type -1 343 1 910 285 64 26 chr2 11651176 11651374 -241605209 + L2 LINE L2 1777 2001 -1313 242 183 0 61 chr2 11652487 11652569 -241604014 - L1MA8 LINE L1 -4 6287 6211 574 163 34 88 chr2 11652572 11652614 -241603969 + L1MA7 LINE L1 6095 6138 -153 1926 147 0 11 chr2 11652614 11652921 -241603662 - AluSx SINE Alu 0 304 1 574 163 34 88 chr2 11652921 11653023 -241603560 + L1MA7 LINE L1 6138 6233 -58 384 239 0 83 chr2 11653306 11653415 -241603168 + MER5B DNA MER1_type 1 100 -78 187 143 0 0 chr2 11654273 11654301 -241602282 - L2 LINE L2 -2924 390 363 1922 183 19 19 chr2 11655271 11655638 -241600945 - MLT2D LTR ERVL -45 369 3 432 0 0 0 chr2 11655742 11655790 -241600793 + (TG)n Simple_repeat Simple_repeat 1 48 0 1276 164 72 23 chr2 11656479 11656783 -241599800 - LTR37A LTR ERV1 -21 405 87 1625 124 62 4 chr2 11656885 11657142 -241599441 + Tigger3(Golem) DNA MER2_type 2757 3028 -1 1237 103 6 0 chr2 11657205 11657380 -241599203 - AluY SINE Alu -17 294 119 225 140 70 0 chr2 11657502 11657559 -241599024 + T-rich Low_complexity Low_complexity 4 64 0 10199 30 7 0 chr2 11657572 11659540 -241597043 - L1PA5 LINE L1 -11 6143 4169 563 15 0 0 chr2 11659540 11659606 -241596977 + L1PA5 LINE L1 4119 4184 -1962 1002 83 0 0 chr2 11659609 11659741 -241596842 - AluY SINE Alu -179 132 1 223 208 132 0 chr2 11659807 11659860 -241596723 - L2 LINE L2 0 3272 3213 704 228 204 0 chr2 11660024 11660235 -241596348 + MIR SINE MIR 9 262 0 1823 135 10 3 chr2 11660239 11660527 -241596056 - AluSx SINE Alu -22 290 1 2513 137 3 3 chr2 11661233 11661597 -241594986 - THE1B LTR MaLR 0 364 1 210 310 56 0 chr2 11661763 11661834 -241594749 - MIR SINE MIR -14 248 174 599 231 6 58 chr2 11662960 11663116 -241593467 + MER5A DNA MER1_type 42 189 0 210 105 0 0 chr2 11665668 11665706 -241590877 + (T)n Simple_repeat Simple_repeat 1 38 0 192 77 0 0 chr2 11666817 11666843 -241589740 + (A)n Simple_repeat Simple_repeat 1 26 0 328 286 56 40 chr2 11667230 11667356 -241589227 + MIR SINE MIR 96 223 -39 886 234 114 45 chr2 11668485 11668600 -241587983 + MLT1J2 LTR MaLR 37 143 -266 1020 287 56 47 chr2 11668600 11669043 -241587540 - LTR16A LTR ERVL -3 447 1 886 234 114 45 chr2 11669043 11669268 -241587315 + MLT1J2 LTR MaLR 143 364 -45 1218 180 4 8 chr2 11669285 11669529 -241587054 - AluSx SINE Alu -9 303 61 206 295 0 13 chr2 11670799 11670877 -241585706 + T-rich Low_complexity Low_complexity 5 81 0 396 52 0 17 chr2 11671413 11671471 -241585112 + Alu SINE Alu 244 300 -1 198 320 51 13 chr2 11671479 11671557 -241585026 - MIR SINE MIR -132 130 50 1971 46 0 0 chr2 11671968 11672205 -241584378 + L1P2 LINE L1 5320 5556 -598 194 312 110 28 chr2 11672254 11672363 -241584220 + L3 LINE CR1 1086 1203 -374 878 236 20 24 chr2 11672507 11672804 -241583779 + AluSg SINE Alu 3 298 -2 621 216 70 49 chr2 11673503 11673688 -241582895 + MER53 DNA DNA 1 189 0 1660 147 58 17 chr2 11674914 11675206 -241581377 - AluSx SINE Alu -8 304 1 195 146 0 0 chr2 11676145 11676186 -241580397 + (CA)n Simple_repeat Simple_repeat 1 41 0 467 206 52 44 chr2 11676505 11676641 -241579942 - MER5A DNA MER1_type -3 186 50 449 309 43 0 chr2 11677098 11677237 -241579346 + MIR3 SINE MIR 40 184 -24 221 322 41 50 chr2 11677351 11677472 -241579111 + L2 LINE L2 2948 3067 -205 1987 166 108 30 chr2 11677483 11677577 -241579006 - MLT1C LTR MaLR 0 467 382 4106 80 16 4 chr2 11677577 11678124 -241578459 + MER41A LTR ERV1 1 554 0 1987 166 108 30 chr2 11678124 11678462 -241578121 - MLT1C LTR MaLR -85 382 1 343 270 122 0 chr2 11679445 11679560 -241577023 - MIR SINE MIR -17 245 117 21 36 0 0 chr2 11679849 11679877 -241576706 + AT_rich Low_complexity Low_complexity 1 28 0 1253 132 0 0 chr2 11680646 11680828 -241575755 + AluSx SINE Alu 1 182 -130 1875 155 0 7 chr2 11682127 11682437 -241574146 - AluSg SINE Alu -2 308 1 305 233 44 0 chr2 11682539 11682629 -241573954 + LTR50 LTR ERVL 702 795 0 588 275 17 26 chr2 11682646 11682879 -241573704 - L1M4 LINE L1 -3705 2441 2211 24 0 0 0 chr2 11683824 11683848 -241572735 + AT_rich Low_complexity Low_complexity 1 24 0 490 277 154 0 chr2 11684208 11684386 -241572197 + MIR SINE MIR 7 210 -52 3238 141 125 29 chr2 11684552 11685206 -241571377 + LTR62 LTR ERVK 1 717 -2 1266 123 4 25 chr2 11685644 11685879 -241570704 - AluY SINE Alu -81 230 1 530 258 58 21 chr2 11685975 11686165 -241570418 + L2 LINE L2 3081 3277 -36 504 250 277 57 chr2 11686401 11686737 -241569846 + MLT1H LTR MaLR 123 532 -17 263 290 32 65 chr2 11686839 11686963 -241569620 - MIR SINE MIR -5 257 138 670 225 57 103 chr2 11686989 11687251 -241569332 + MIR SINE MIR 13 262 0 399 280 91 7 chr2 11687267 11687410 -241569173 - MIR SINE MIR -38 224 70 1911 128 10 3 chr2 11687416 11687712 -241568871 + AluSx SINE Alu 1 298 -14 328 333 98 0 chr2 11688491 11688623 -241567960 + L2 LINE L2 3122 3266 -6 613 235 15 0 chr2 11690413 11690545 -241566038 - ERVL LTR ERVL -3592 2172 2039 420 211 22 0 chr2 11690547 11690637 -241565946 - ERVL LTR ERVL -3640 2124 2033 * 5011 241 25 5 chr2 11690636 11691741 -241564842 - ERVL LTR ERVL -3642 2122 996 1082 212 126 62 chr2 11692058 11692430 -241564153 - MSTD LTR MaLR 0 396 1 1819 204 15 33 chr2 11692549 11692946 -241563637 - MLT1B LTR MaLR 0 390 1 329 344 70 16 chr2 11693452 11693638 -241562945 - MIR SINE MIR -47 215 20 1640 164 21 11 chr2 11694160 11694446 -241562137 - AluJo SINE Alu -23 289 1 328 239 142 81 chr2 11694991 11695188 -241561395 + MER3 DNA MER1_type 1 209 0 * 559 242 99 37 chr2 11695039 11695200 -241561383 - MER3 DNA MER1_type -3 206 36 373 354 34 82 chr2 11695837 11696131 -241560452 - L2 LINE L2 -1 3271 2992 568 256 28 40 chr2 11696340 11696516 -241560067 - MER77 LTR ERV1 -35 570 397 216 225 0 0 chr2 11696526 11696566 -241560017 + T-rich Low_complexity Low_complexity 1 40 0 2165 105 3 13 chr2 11696569 11696884 -241559699 - AluSx SINE Alu 0 312 1 1144 231 19 115 chr2 11696892 11697311 -241559272 - MER77 LTR ERV1 -217 388 10 287 154 154 39 chr2 11697332 11697410 -241559173 - L1M4 LINE L1 -1498 4648 4562 814 132 69 6 chr2 11697441 11697600 -241558983 - AluSg/x SINE Alu -20 289 121 1157 151 46 18 chr2 11697947 11698300 -241558283 + LTR62 LTR ERVK 321 717 -2 397 243 77 5 chr2 11698621 11698773 -241557810 - MIR SINE MIR -2 260 8 * 423 340 70 51 chr2 11698740 11699155 -241557428 + L2 LINE L2 2247 2669 -645 526 157 0 0 chr2 11699247 11699330 -241557253 + AluSg/x SINE Alu 216 298 -11 2340 88 0 0 chr2 11699334 11699641 -241556942 + AluY SINE Alu 1 307 -4 367 310 195 25 chr2 11699685 11699885 -241556698 + MIR SINE MIR 20 253 -9 2097 120 0 0 chr2 11700215 11700514 -241556069 + AluSx SINE Alu 1 299 -13 2992 144 44 4 chr2 11700551 11701029 -241555554 - LOR1a LTR ERV1 0 497 1 594 301 47 10 chr2 11701305 11701498 -241555085 - MIR SINE MIR 0 262 63 280 175 21 134 chr2 11701570 11701667 -241554916 + MER112 DNA MER1_type 2 87 -173 1828 168 0 0 chr2 11701670 11701967 -241554616 - AluJb SINE Alu -15 297 1 418 254 62 72 chr2 11703539 11703585 -241552998 - MIR SINE MIR -69 193 148 2314 130 24 11 chr2 11703585 11703954 -241552629 - THE1C LTR MaLR -1 374 1 418 254 62 72 chr2 11703954 11704100 -241552483 - MIR SINE MIR -114 148 3 2194 120 30 73 chr2 11704114 11704475 -241552108 - L1MA5A LINE L1 -5 6292 5954 1925 150 0 0 chr2 11704475 11704788 -241551795 - AluSq SINE Alu 0 313 1 2194 120 30 73 chr2 11704788 11704893 -241551690 - L1MA5A LINE L1 -343 5954 5846 2790 230 92 8 chr2 11705172 11706385 -241550198 + L1ME2 LINE L1 4666 6001 -165 2184 157 76 40 chr2 11706385 11706830 -241549753 + LOR1b LTR ERV1 1 461 0 2790 230 92 8 chr2 11706830 11707007 -241549576 + L1ME2 LINE L1 6001 6162 -4 1387 255 103 18 chr2 11707012 11707749 -241548834 + L1ME3A LINE L1 5152 5949 -221 2131 100 40 3 chr2 11707969 11708269 -241548314 - AluSx SINE Alu -1 311 1 385 220 44 13 chr2 11708909 11709068 -241547515 + (TA)n Simple_repeat Simple_repeat 1 164 0 207 176 78 39 chr2 11710189 11710201 -241546382 + MIR SINE MIR 85 95 -113 2633 88 30 11 chr2 11710201 11710565 -241546018 - THE1C LTR MaLR -4 371 1 207 176 78 39 chr2 11710565 11710603 -241545980 + MIR SINE MIR 95 137 -71 279 258 194 0 chr2 11710609 11710702 -241545881 - L2 LINE L2 -5 3308 3198 2717 142 60 39 chr2 11710702 11711188 -241545395 - LOR1a LTR ERV1 0 497 2 190 228 132 70 chr2 11711321 11711435 -241545148 + MIR SINE MIR 142 262 0 445 252 0 32 chr2 11711569 11711692 -241544891 - MER5A DNA MER1_type -39 150 32 185 81 65 32 chr2 11712773 11712835 -241543748 + A-rich Low_complexity Low_complexity 5 68 0 23 54 0 0 chr2 11712838 11712875 -241543708 + AT_rich Low_complexity Low_complexity 1 37 0 696 219 14 123 chr2 11713045 11713264 -241543319 - MER77 LTR ERV1 -401 204 10 331 264 80 85 chr2 11713285 11713394 -241543189 - L1M4 LINE L1 -1498 4648 4540 1910 151 21 0 chr2 11713394 11713679 -241542904 - AluSx SINE Alu -21 291 1 331 264 80 85 chr2 11713679 11713753 -241542830 - L1M4 LINE L1 -1606 4540 4467 2221 114 7 0 chr2 11713753 11714042 -241542541 - AluSx SINE Alu -21 291 1 331 264 80 85 chr2 11714042 11714282 -241542301 - L1M4 LINE L1 -1679 4467 4226 1760 215 134 5 chr2 11714287 11714728 -241541855 - MLT1D LTR MaLR -2 503 6 413 283 85 46 chr2 11714730 11715037 -241541546 - L1M4 LINE L1 -1916 4230 3912 226 234 99 18 chr2 11715145 11715256 -241541327 - MLT1H1 LTR MaLR -124 431 312 323 262 37 80 chr2 11716908 11717034 -241539549 + MER5A DNA MER1_type 4 121 -68 2009 141 7 3 chr2 11717034 11717332 -241539251 - AluJb SINE Alu -13 299 1 323 262 37 80 chr2 11717332 11717392 -241539191 + MER5A DNA MER1_type 121 182 -7 2238 145 90 0 chr2 11717964 11718343 -241538240 - MLT2C2 LTR ERVL -51 413 1 2677 39 0 3 chr2 11718441 11718751 -241537832 + AluY SINE Alu 1 309 -2 463 200 85 54 chr2 11719614 11719744 -241536839 - MIR SINE MIR -50 212 79 1759 168 3 29 chr2 11719941 11720251 -241536332 + AluJb SINE Alu 1 302 -10 531 248 12 56 chr2 11720713 11720874 -241535709 - MER63A DNA MER1_type 0 210 57 3265 67 11 61 chr2 11721026 11721310 -241535273 - L1PB1 LINE L1 -4 6147 5893 2179 89 0 24 chr2 11721310 11721603 -241534980 + AluSx SINE Alu 1 286 -26 3265 67 11 61 chr2 11721603 11721779 -241534804 - L1PB1 LINE L1 -258 5893 5710 2278 93 0 10 chr2 11721866 11722166 -241534417 + AluY SINE Alu 1 297 -14 226 363 116 14 chr2 11722356 11722502 -241534081 + L2 LINE L2 3107 3267 -5 434 264 10 1 chr2 11723081 11723191 -241533392 + MIR SINE MIR 35 143 -67 315 336 66 8 chr2 11723893 11724015 -241532568 - MIR SINE MIR -113 149 21 209 338 0 26 chr2 11724028 11724105 -241532478 + MIR SINE MIR 108 182 -80 301 257 230 9 chr2 11724553 11724666 -241531917 + MIR SINE MIR 69 206 -56 22 56 0 0 chr2 11726527 11726563 -241530020 + AT_rich Low_complexity Low_complexity 1 36 0 333 255 185 32 chr2 11726619 11726776 -241529807 - MIR SINE MIR -62 200 20 198 309 217 0 chr2 11727095 11727325 -241529258 - L2 LINE L2 -533 2781 2502 352 319 77 11 chr2 11728260 11728442 -241528141 + MIR SINE MIR 19 212 -50 222 310 69 0 chr2 11728597 11728655 -241527928 - L2 LINE L2 -1 3271 3210 6904 147 43 6 chr2 11729230 11731100 -241525483 + L1PA11 LINE L1 4263 6174 0 2344 141 14 3 chr2 11731100 11731447 -241525136 + L1PA15 LINE L1 5797 6147 -18 264 88 0 0 chr2 11731499 11731533 -241525050 - U2 snRNA snRNA -154 34 1 477 237 15 38 chr2 11731843 11731974 -241524609 - L1M2c LINE L1 -4652 2137 2010 238 263 102 25 chr2 11734310 11734428 -241522155 + MIR SINE MIR 123 249 -13 213 370 22 11 chr2 11734506 11734598 -241521985 + MIR SINE MIR 23 115 -147 2163 98 7 0 chr2 11734673 11734950 -241521633 - AluSq SINE Alu -11 302 24 594 194 94 18 chr2 11734950 11735120 -241521463 + MIR SINE MIR 40 222 -40 2200 115 81 16 chr2 11735419 11735740 -241520843 - MER61A LTR ERV1 0 343 2 207 130 296 0 chr2 11735786 11735840 -241520743 + L2 LINE L2 3241 3310 -3 198 211 53 0 chr2 11736006 11736044 -241520539 + L2 LINE L2 3210 3249 -23 1502 187 159 6 chr2 11736263 11736578 -241520005 - MLT1A1 LTR MaLR 0 365 3 241 243 63 27 chr2 11736587 11736698 -241519885 - L1ME LINE L1 -261 5860 5746 182 315 37 0 chr2 11737204 11737258 -241519325 - L3b LINE CR1 -22 1561 1506 1822 164 7 10 chr2 11737524 11737822 -241518761 - AluSx SINE Alu -15 297 1 277 309 73 41 chr2 11737970 11738190 -241518393 - L2 LINE L2 -1763 1551 1325 2444 203 52 15 chr2 11738800 11739338 -241517245 - MER74A LTR ERVL 0 558 1 336 232 181 14 chr2 11740474 11740612 -241515971 - MIR SINE MIR -28 234 74 231 275 11 44 chr2 11740791 11740882 -241515701 + MER103 DNA DNA 20 107 -59 2077 138 16 0 chr2 11741538 11741843 -241514740 - AluSx SINE Alu -2 310 1 2422 181 56 11 chr2 11742309 11742774 -241513809 + MER66B LTR ERV1 1 486 0 369 286 40 16 chr2 11742798 11742924 -241513659 + MIR SINE MIR 20 148 -114 1330 137 124 29 chr2 11742964 11743301 -241513282 + MSTA LTR MaLR 1 375 0 313 301 54 62 chr2 11744054 11744200 -241512383 - MIR SINE MIR -64 198 47 226 310 216 0 chr2 11745095 11745211 -241511372 + MIR SINE MIR 49 189 -73 366 23 0 0 chr2 11745712 11745755 -241510828 + (TCCA)n Simple_repeat Simple_repeat 2 44 0 2552 48 3 0 chr2 11745766 11746060 -241510523 - AluY SINE Alu -16 295 1 200 304 18 0 chr2 11746069 11746125 -241510458 - L2 LINE L2 -16 3256 3200 943 221 5 5 chr2 11746194 11746398 -241510185 - L1M4 LINE L1 -1277 4869 4666 2688 236 32 6 chr2 11746879 11747594 -241508989 - L1M4 LINE L1 -974 5172 4439 284 309 37 0 chr2 11747597 11747678 -241508905 + MER58C DNA MER1_type 1 84 -131 183 80 0 0 chr2 11747686 11747711 -241508872 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 384 224 47 0 chr2 11747712 11747797 -241508786 + MER58C DNA MER1_type 126 214 -1 2758 255 75 14 chr2 11747828 11748461 -241508122 - L1M4 LINE L1 -1705 4441 3735 2015 125 3 20 chr2 11748461 11748757 -241507826 - AluSx SINE Alu -21 291 1 2758 255 75 14 chr2 11748757 11749030 -241507553 - L1M4 LINE L1 -2411 3735 3480 896 104 149 0 chr2 11749242 11749376 -241507207 - AluSg/x SINE Alu -13 297 144 337 73 0 0 chr2 11749377 11749418 -241507165 - Alu SINE Alu -249 53 13 204 40 0 0 chr2 11749790 11749815 -241506768 + (CCA)n Simple_repeat Simple_repeat 1 25 0 2313 105 0 0 chr2 11749856 11750150 -241506433 - AluSx SINE Alu -18 294 1 269 320 59 30 chr2 11750273 11750414 -241506169 - MIR SINE MIR -64 144 16 415 277 202 16 chr2 11751079 11751332 -241505251 + L2 LINE L2 3002 3301 -12 216 167 0 0 chr2 11751345 11751381 -241505202 + (TGAA)n Simple_repeat Simple_repeat 3 38 0 189 313 157 17 chr2 11751415 11751530 -241505053 + MIR3 SINE MIR 10 140 -68 1856 120 38 17 chr2 11751884 11752175 -241504408 - L1MA4A LINE L1 -11 6292 5996 2716 130 26 71 chr2 11752177 11753077 -241503506 - L1MA4A LINE L1 -577 5726 4867 627 134 0 10 chr2 11753078 11753175 -241503408 + MER4A LTR ERV1 3 98 -566 1591 124 6 95 chr2 11753175 11753532 -241503051 + MER4A LTR ERV1 261 664 0 8323 218 38 20 chr2 11753535 11756693 -241499890 - L1M4 LINE L1 -1278 5570 1491 2108 129 3 3 chr2 11756693 11757003 -241499580 - AluSg SINE Alu 0 310 1 8323 218 38 20 chr2 11757003 11758436 -241498147 - L1M4 LINE L1 -5357 1491 85 422 252 38 8 chr2 11758482 11758613 -241497970 - MIR SINE MIR -62 200 66 1126 252 43 41 chr2 11759080 11759425 -241497158 + L1ME3A LINE L1 5820 6165 -5 413 279 75 7 chr2 11759594 11759741 -241496842 - MIR SINE MIR -76 186 30 212 260 104 10 chr2 11760252 11760348 -241496235 - MIR SINE MIR -97 165 61 21 0 0 0 chr2 11761493 11761514 -241495069 + AT_rich Low_complexity Low_complexity 1 21 0 193 209 23 0 chr2 11762083 11762126 -241494457 - MIR SINE MIR -114 148 105 512 296 23 68 chr2 11762715 11762916 -241493667 - MIR SINE MIR -1 261 52 216 0 0 0 chr2 11762916 11762940 -241493643 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 2094 106 7 0 chr2 11762940 11763223 -241493360 - AluSg SINE Alu -25 285 1 512 296 23 68 chr2 11763223 11763284 -241493299 - MIR SINE MIR -208 54 10 819 242 119 40 chr2 11764316 11764431 -241492152 + MLT1J2 LTR MaLR 37 141 -309 1020 303 45 34 chr2 11764431 11764873 -241491710 - LTR16A LTR ERVL -3 447 1 819 242 119 40 chr2 11764873 11765034 -241491549 + MLT1J2 LTR MaLR 141 335 -115 2204 119 3 0 chr2 11765113 11765415 -241491168 - AluSx SINE Alu -9 303 1 204 362 60 0 chr2 11765639 11765755 -241490828 + MIR SINE MIR 1 123 -139 548 204 81 65 chr2 11766800 11766986 -241489597 + MER53 DNA DNA 1 189 0 299 164 77 87 chr2 11767812 11767916 -241488667 + MIR SINE MIR 124 226 -36 225 317 43 61 chr2 11767988 11768218 -241488365 + MIR SINE MIR 27 252 -10 1304 174 9 0 chr2 11768331 11768544 -241488039 - AluJb SINE Alu -12 300 86 1397 159 145 64 chr2 11768689 11769048 -241487535 - MLT1B LTR MaLR 0 390 3 784 174 39 13 chr2 11769116 11769271 -241487312 + MLT1B LTR MaLR 232 390 0 979 220 56 60 chr2 11771564 11772006 -241484577 - MLT1D LTR MaLR -7 498 3 408 274 22 7 chr2 11772185 11772320 -241484263 + MIR3 SINE MIR 46 182 -26 290 274 105 48 chr2 11772628 11772752 -241483831 + MIR SINE MIR 81 211 -51 934 252 147 42 chr2 11772827 11773255 -241483328 + L2 LINE L2 2841 3313 0 1614 218 32 41 chr2 11773352 11773793 -241482790 - MER101 LTR ERV1 -27 447 11 283 204 177 53 chr2 11773808 11774034 -241482549 - L2 LINE L2 -678 2636 2383 257 342 46 7 chr2 11774329 11774481 -241482102 + MIR SINE MIR 99 256 -6 634 274 34 26 chr2 11775207 11775441 -241481142 - MIR SINE MIR -6 256 21 243 0 0 0 chr2 11776888 11776915 -241479668 + (T)n Simple_repeat Simple_repeat 1 27 0 203 208 125 28 chr2 11777371 11777443 -241479140 - L2 LINE L2 -202 3070 2992 2524 140 7 74 chr2 11777720 11778104 -241478479 + MSTB LTR MaLR 1 351 -75 2369 75 3 35 chr2 11778104 11778423 -241478160 - AluY SINE Alu -2 309 1 2524 140 7 74 chr2 11778423 11778495 -241478088 + MSTB LTR MaLR 351 426 0 1021 206 31 5 chr2 11779687 11779881 -241476702 + MLT2D LTR ERVL 122 320 -94 270 105 0 0 chr2 11779900 11779938 -241476645 - Tigger2 DNA MER2_type -401 2317 2280 * 412 143 0 0 chr2 11779936 11779999 -241476584 - Tigger2 DNA MER2_type -2649 69 7 265 88 0 0 chr2 11779996 11780030 -241476553 + MLT2D LTR ERVL 487 520 0 * 3785 210 28 67 chr2 11780031 11781337 -241475246 + MLT1B-int LTR MaLR 2 1370 -1 2080 163 26 16 chr2 11781338 11781724 -241474859 + MLT1B LTR MaLR 1 390 0 2300 69 0 21 chr2 11782579 11782900 -241473683 - AluY SINE Alu 0 315 1 182 273 18 0 chr2 11783378 11783433 -241473150 + MIR SINE MIR 151 206 -56 1878 189 17 3 chr2 11783823 11784173 -241472410 + THE1A LTR MaLR 1 355 0 352 302 39 44 chr2 11784525 11784707 -241471876 + MIR3 SINE MIR 19 199 -9 378 238 90 16 chr2 11784764 11784886 -241471697 + MIR SINE MIR 81 211 -51 235 297 26 87 chr2 11785608 11785837 -241470746 + L3 LINE CR1 796 1010 -567 347 280 125 12 chr2 11786401 11786569 -241470014 + L3 LINE CR1 1173 1359 -218 537 261 46 7 chr2 11787263 11787416 -241469167 - MIR SINE MIR -73 189 31 242 316 140 0 chr2 11787461 11787575 -241469008 - L2 LINE L2 -5 3267 3138 259 247 0 24 chr2 11787869 11787954 -241468629 - L2 LINE L2 -207 3065 2983 847 112 12 18 chr2 11789070 11789239 -241467344 + (TCTA)n Simple_repeat Simple_repeat 4 171 0 2193 165 22 3 chr2 11789302 11789660 -241466923 + MLT1A1 LTR MaLR 1 365 0 218 95 24 0 chr2 11789665 11789707 -241466876 + (CA)n Simple_repeat Simple_repeat 2 44 0 2377 107 0 7 chr2 11790871 11791180 -241465403 + AluSx SINE Alu 1 307 -5 387 283 40 7 chr2 11791929 11792081 -241464502 - MIR SINE MIR 0 262 106 1727 182 63 17 chr2 11792116 11792463 -241464120 - MLT1B LTR MaLR 0 390 28 208 214 0 0 chr2 11793002 11793044 -241463539 + MIR SINE MIR 118 159 -103 390 255 183 0 chr2 11793108 11793256 -241463327 - MIR SINE MIR -14 248 75 211 296 16 72 chr2 11795312 11795437 -241461146 + L2 LINE L2 2911 3028 -244 492 219 34 41 chr2 11795573 11795767 -241460816 + MIR SINE MIR 14 205 -57 822 298 103 21 chr2 11795816 11796227 -241460356 + L1ME3A LINE L1 5119 5495 -675 1053 183 0 0 chr2 11796227 11796402 -241460181 - FAM SINE Alu 0 175 1 822 298 103 21 chr2 11796402 11796707 -241459876 + L1ME3A LINE L1 5495 5894 -276 216 283 38 4 chr2 11797195 11797297 -241459286 + MIR SINE MIR 82 188 -20 2023 128 0 27 chr2 11798831 11799128 -241457455 - AluSx SINE Alu -19 293 5 1180 199 84 117 chr2 11799304 11799732 -241456851 - MLT2D LTR ERVL 0 414 1 298 354 78 5 chr2 11800398 11800590 -241455993 + MIR SINE MIR 21 226 -36 3012 119 9 0 chr2 11801958 11802385 -241454198 + MER57B LTR ERV1 1 431 -3 662 307 21 17 chr2 11803952 11804135 -241452448 + MIR SINE MIR 2 188 -74 3414 133 0 2 chr2 11804135 11804633 -241451950 + LOR1a LTR ERV1 1 497 0 662 307 21 17 chr2 11804633 11804687 -241451896 + MIR SINE MIR 188 240 -22 2119 106 32 16 chr2 11806408 11806719 -241449864 + THE1C LTR MaLR 1 316 -59 499 73 59 0 chr2 11809849 11809917 -241446666 + THE1C LTR MaLR 304 375 0 187 250 217 0 chr2 11810131 11810191 -241446392 - MIR3 SINE MIR -22 186 114 21 57 0 0 chr2 11810309 11810344 -241446239 + AT_rich Low_complexity Low_complexity 1 35 0 224 326 0 22 chr2 11810470 11810562 -241446021 - MIR SINE MIR -122 140 51 4111 184 28 73 chr2 11810916 11811861 -241444722 - L1MB7 LINE L1 -6 6178 5191 507 33 0 0 chr2 11811861 11811922 -241444661 + (CA)n Simple_repeat Simple_repeat 2 62 0 4111 184 28 73 chr2 11811922 11812265 -241444318 - L1MB7 LINE L1 -993 5191 4967 1988 117 46 0 chr2 11812265 11812548 -241444035 - AluY SINE Alu -15 296 1 4111 184 28 73 chr2 11812548 11812675 -241443908 - L1MB7 LINE L1 -1217 4967 4836 321 324 63 42 chr2 11813061 11813345 -241443238 + L1MC/D LINE L1 5353 5642 -2166 22 35 0 0 chr2 11813617 11813646 -241442937 + AT_rich Low_complexity Low_complexity 1 29 0 2554 71 0 0 chr2 11813923 11814231 -241442352 + AluY SINE Alu 1 308 -3 4156 169 18 35 chr2 11814465 11815244 -241441339 - L1MB3 LINE L1 -1 6182 5417 201 302 87 63 chr2 11816761 11816795 -241439788 - L2 LINE L2 -1 3312 3280 1819 255 22 13 chr2 11816795 11817258 -241439325 + MLT1C LTR MaLR 1 467 0 201 302 87 63 chr2 11817258 11817349 -241439234 - L2 LINE L2 -33 3280 3184 452 294 8 0 chr2 11819723 11819842 -241436741 - MIR SINE MIR -108 154 35 226 188 0 21 chr2 11821488 11821536 -241435047 + (TA)n Simple_repeat Simple_repeat 1 47 0 230 269 19 67 chr2 11821548 11821608 -241434975 + MIR SINE MIR 164 218 -44 1935 192 14 11 chr2 11821608 11821972 -241434611 - MLT1A1 LTR MaLR 0 365 1 230 269 19 67 chr2 11821972 11822015 -241434568 + MIR SINE MIR 218 262 0 1161 44 0 7 chr2 11822876 11823013 -241433570 - AluY SINE Alu -175 136 1 2174 204 54 78 chr2 11823023 11823149 -241433434 - L1ME1 LINE L1 -5 6161 6034 930 117 0 0 chr2 11823149 11823277 -241433306 + L1PA10 LINE L1 6031 6158 -10 2174 204 54 78 chr2 11823277 11823781 -241432802 - L1ME1 LINE L1 -132 6034 5546 3464 176 47 43 chr2 11823790 11824535 -241432048 - L1MD1 LINE L1 0 6242 5495 189 0 0 0 chr2 11825940 11825961 -241430622 + (A)n Simple_repeat Simple_repeat 1 21 0 578 295 57 5 chr2 11826441 11826651 -241429932 - MIR SINE MIR -3 259 39 347 306 49 22 chr2 11827273 11827456 -241429127 + L2 LINE L2 2311 2498 -816 1090 249 9 0 chr2 11827724 11827953 -241428630 - MIR SINE MIR -10 252 22 360 185 126 89 chr2 11828032 11828167 -241428416 - MIR SINE MIR -83 179 40 307 336 25 16 chr2 11828273 11828395 -241428188 - MIR3 SINE MIR -3 205 83 203 0 37 0 chr2 11828542 11828569 -241428014 + (TC)n Simple_repeat Simple_repeat 1 28 0 1958 253 55 28 chr2 11829824 11830589 -241425994 - L1ME3 LINE L1 -42 6120 5292 269 250 14 0 chr2 11830587 11830659 -241425924 + L1M LINE L1 5323 5395 -767 * 744 311 86 17 chr2 11831310 11831661 -241424922 + MLT1I LTR MaLR 1 375 -34 299 274 163 26 chr2 11832821 11832974 -241423609 - Charlie8 DNA MER1_type -2201 216 43 850 284 135 48 chr2 11833309 11833796 -241422787 + L2 LINE L2 2216 2659 -654 192 111 0 0 chr2 11833796 11833832 -241422751 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 850 284 135 48 chr2 11833832 11834342 -241422241 + L2 LINE L2 2659 3297 -16 2446 145 31 3 chr2 11834342 11834734 -241421849 - MER57A LTR ERV1 0 403 1 850 284 135 48 chr2 11834734 11834752 -241421831 + L2 LINE L2 3297 3312 -1 1743 220 128 15 chr2 11834859 11835313 -241421270 + MLT1D LTR MaLR 1 505 0 2010 56 16 0 chr2 11835474 11835726 -241420857 + AluY SINE Alu 50 305 -6 210 325 0 38 chr2 11835928 11836008 -241420575 - MIR SINE MIR -138 124 48 288 284 55 31 chr2 11836847 11836974 -241419609 + L2 LINE L2 3141 3270 -2 21 71 0 0 chr2 11837166 11837208 -241419375 + AT_rich Low_complexity Low_complexity 1 42 0 395 290 80 23 chr2 11837243 11837419 -241419164 - MIR SINE MIR -57 205 20 219 283 0 0 chr2 11837427 11837487 -241419096 + CT-rich Low_complexity Low_complexity 2 61 0 387 254 90 25 chr2 11838707 11838829 -241417754 - LTR16C LTR ERVL -10 481 352 544 203 32 8 chr2 11838836 11838959 -241417624 + MER45B DNA AcHobo 3 128 -912 1503 201 60 6 chr2 11838962 11839276 -241417307 + MER45B DNA AcHobo 710 1040 0 577 266 35 18 chr2 11839279 11839448 -241417135 - LTR16C LTR ERVL -141 350 179 954 276 108 26 chr2 11839800 11840188 -241416395 - MLT1E2 LTR MaLR -2 624 205 2518 187 71 2 chr2 11840228 11840720 -241415863 - L1MB5 LINE L1 -8 6166 5641 529 219 270 0 chr2 11840725 11840862 -241415721 - MLT1E2 LTR MaLR -442 184 11 408 253 12 0 chr2 11841318 11841401 -241415182 + L2 LINE L2 3186 3269 -3 520 349 121 35 chr2 11843111 11843444 -241413139 + L2 LINE L2 2485 2788 -484 654 196 73 34 chr2 11843444 11843623 -241412960 + MER53 DNA DNA 2 187 -2 520 349 121 35 chr2 11843623 11844016 -241412567 + L2 LINE L2 2788 3271 -1 352 330 81 32 chr2 11845522 11845743 -241410840 - MIR SINE MIR -22 240 9 327 275 17 97 chr2 11845848 11846079 -241410504 + MIR SINE MIR 19 223 -39 202 311 11 98 chr2 11847021 11847204 -241409379 + MIR SINE MIR 22 188 -74 1500 159 77 126 chr2 11847700 11848191 -241408392 + MLT1C LTR MaLR 1 467 0 259 305 86 9 chr2 11848893 11848998 -241407585 + L2 LINE L2 3156 3268 -4 183 268 0 36 chr2 11849326 11849382 -241407201 - MIR3 SINE MIR -50 158 105 513 286 134 0 chr2 11849390 11849607 -241406976 + MIR SINE MIR 3 248 -14 285 224 17 0 chr2 11849629 11849687 -241406896 - MIR SINE MIR -113 95 37 2862 88 14 11 chr2 11849834 11850197 -241406386 + THE1B LTR MaLR 1 364 0 361 301 73 1 chr2 11850197 11850331 -241406252 - MIR SINE MIR -62 146 31 318 221 0 67 chr2 11850674 11850778 -241405805 - L2 LINE L2 -61 3252 3156 2217 116 0 0 chr2 11851139 11851431 -241405152 - AluSc SINE Alu -16 293 2 394 298 43 14 chr2 11851669 11851811 -241404772 - MIR3 SINE MIR -65 143 15 532 291 137 4 chr2 11852283 11852500 -241404083 - MIR SINE MIR -6 256 15 2039 135 3 0 chr2 11852696 11852985 -241403598 - AluSx SINE Alu -21 291 2 2068 122 3 20 chr2 11853900 11854204 -241402379 - AluSx SINE Alu -13 299 1 1127 183 77 37 chr2 11854861 11855291 -241401292 - MLT1B LTR MaLR -16 451 1 520 263 0 0 chr2 11855291 11855401 -241401182 - MER69A DNA AcHobo -67 110 1 186 43 0 0 chr2 11855623 11855646 -241400937 + (CCA)n Simple_repeat Simple_repeat 1 23 0 215 292 14 0 chr2 11855854 11855926 -241400657 - MIR SINE MIR -70 138 66 220 308 92 17 chr2 11857009 11857129 -241399454 + MIR SINE MIR 127 255 -7 436 295 69 17 chr2 11857437 11857610 -241398973 + MIR SINE MIR 56 237 -25 209 182 0 0 chr2 11857627 11857660 -241398923 + (ATG)n Simple_repeat Simple_repeat 2 34 0 188 276 40 26 chr2 11857676 11857752 -241398831 - MIR SINE MIR -3 259 183 761 230 59 11 chr2 11857766 11857953 -241398630 + AluJo SINE Alu 116 311 -1 205 305 37 49 chr2 11858096 11858178 -241398405 - MIR SINE MIR -161 101 21 224 373 7 14 chr2 11858651 11858793 -241397790 - MIR SINE MIR -71 191 51 266 270 302 25 chr2 11859082 11859241 -241397342 + MIR SINE MIR 12 214 -48 321 335 61 49 chr2 11859947 11860111 -241396472 - L2 LINE L2 0 3272 3107 285 119 0 0 chr2 11860311 11860353 -241396230 - 5S rRNA rRNA -79 42 1 28 0 0 0 chr2 11860712 11860740 -241395843 + AT_rich Low_complexity Low_complexity 1 28 0 218 158 232 49 chr2 11861064 11861146 -241395437 + L2 LINE L2 3169 3265 -7 2277 97 0 7 chr2 11861502 11861800 -241394783 - AluY SINE Alu -13 298 3 209 372 41 28 chr2 11861807 11861952 -241394631 + L2 LINE L2 3119 3265 -7 1964 180 18 13 chr2 11862247 11862631 -241393952 + MLT2D LTR ERVL 1 482 -38 387 144 48 20 chr2 11862631 11862777 -241393806 + (TCTA)n Simple_repeat Simple_repeat 4 153 0 258 56 0 0 chr2 11862777 11862813 -241393770 + (TC)n Simple_repeat Simple_repeat 1 36 0 434 312 81 60 chr2 11863057 11863490 -241393093 + LTR16A1 LTR ERVL 16 457 0 186 273 23 0 chr2 11863499 11863543 -241393040 + L2 LINE L2 3216 3260 -12 2379 87 3 0 chr2 11863611 11863909 -241392674 - AluSc SINE Alu -10 299 1 2068 122 3 20 chr2 11864344 11864648 -241391935 + AluSx SINE Alu 1 299 -13 2039 135 3 0 chr2 11865563 11865852 -241390731 + AluSx SINE Alu 2 291 -21 532 291 137 4 chr2 11866048 11866265 -241390318 + MIR SINE MIR 15 256 -6 394 298 43 14 chr2 11866737 11866879 -241389704 + MIR3 SINE MIR 15 162 -65 2217 116 0 0 chr2 11867117 11867409 -241389174 + AluSc SINE Alu 2 293 -16 318 221 0 67 chr2 11867770 11867874 -241388709 + L2 LINE L2 3156 3252 -61 361 301 73 1 chr2 11868217 11868351 -241388232 + MIR SINE MIR 31 172 -62 2862 88 14 11 chr2 11868351 11868714 -241387869 - THE1B LTR MaLR 0 364 1 285 224 17 0 chr2 11868861 11868919 -241387664 + MIR SINE MIR 37 95 -113 513 286 134 0 chr2 11868941 11869158 -241387425 - MIR SINE MIR -14 248 3 183 268 0 36 chr2 11869166 11869222 -241387361 + MIR3 SINE MIR 105 158 -50 259 305 86 9 chr2 11869550 11869655 -241386928 - L2 LINE L2 -4 3268 3156 1500 159 77 126 chr2 11870358 11870849 -241385734 - MLT1C LTR MaLR 0 467 1 202 311 11 98 chr2 11871345 11871528 -241385055 - MIR SINE MIR -74 188 22 327 275 17 97 chr2 11872471 11872702 -241383881 - MIR SINE MIR -39 223 19 352 330 81 32 chr2 11872807 11873028 -241383555 + MIR SINE MIR 9 240 -22 520 349 121 35 chr2 11874534 11874927 -241381656 - L2 LINE L2 -1 3271 2913 654 196 73 34 chr2 11874927 11875106 -241381477 - MER53 DNA DNA -2 187 2 520 349 121 35 chr2 11875106 11875439 -241381144 - L2 LINE L2 -359 2913 2485 408 253 12 0 chr2 11877149 11877232 -241379351 - L2 LINE L2 -3 3269 3186 529 219 270 0 chr2 11877688 11877825 -241378758 + MLT1E2 LTR MaLR 11 184 -442 2518 187 71 2 chr2 11877830 11878322 -241378261 + L1MB5 LINE L1 5641 6166 -8 954 276 108 26 chr2 11878362 11878750 -241377833 + MLT1E2 LTR MaLR 205 624 -2 544 278 35 18 chr2 11879102 11879271 -241377312 + LTR16C LTR ERVL 179 350 -141 1503 201 60 6 chr2 11879274 11879588 -241376995 - MER45B DNA AcHobo 0 1040 710 544 203 32 8 chr2 11879591 11879714 -241376869 - MER45B DNA AcHobo -912 128 3 387 254 90 25 chr2 11879721 11879843 -241376740 + LTR16C LTR ERVL 352 481 -10 219 283 0 0 chr2 11881063 11881123 -241375460 + GA-rich Low_complexity Low_complexity 2 61 0 395 290 80 23 chr2 11881131 11881307 -241375276 + MIR SINE MIR 20 205 -57 21 71 0 0 chr2 11881342 11881384 -241375199 + AT_rich Low_complexity Low_complexity 1 42 0 288 284 55 31 chr2 11881576 11881703 -241374880 - L2 LINE L2 -2 3270 3141 210 325 0 38 chr2 11882541 11882621 -241373962 + MIR SINE MIR 48 124 -138 2672 36 0 3 chr2 11882823 11883130 -241373453 - AluY SINE Alu -5 306 1 2174 204 54 78 chr2 11883140 11883266 -241373317 - L1ME1 LINE L1 -5 6161 6034 930 117 0 0 chr2 11883266 11883394 -241373189 + L1PA10 LINE L1 6031 6158 -10 2174 204 54 78 chr2 11883394 11883898 -241372685 - L1ME1 LINE L1 -132 6034 5546 3464 176 47 43 chr2 11883907 11884652 -241371931 - L1MD1 LINE L1 0 6242 5495 189 0 0 0 chr2 11886057 11886078 -241370505 + (A)n Simple_repeat Simple_repeat 1 21 0 578 295 57 5 chr2 11886558 11886768 -241369815 - MIR SINE MIR -3 259 39 347 306 49 22 chr2 11887390 11887573 -241369010 + L2 LINE L2 2311 2498 -816 1090 249 9 0 chr2 11887841 11888070 -241368513 - MIR SINE MIR -10 252 22 360 185 126 89 chr2 11888149 11888284 -241368299 - MIR SINE MIR -83 179 40 307 336 25 16 chr2 11888390 11888512 -241368071 - MIR3 SINE MIR -3 205 83 203 0 37 0 chr2 11888659 11888686 -241367897 + (TC)n Simple_repeat Simple_repeat 1 28 0 1958 253 55 28 chr2 11889941 11890706 -241365877 - L1ME3 LINE L1 -42 6120 5292 269 250 14 0 chr2 11890704 11890776 -241365807 + L1M LINE L1 5323 5395 -769 * 744 311 86 17 chr2 11891427 11891778 -241364805 + MLT1I LTR MaLR 1 375 -34 299 274 163 26 chr2 11892938 11893091 -241363492 - Charlie8 DNA MER1_type -2201 216 43 850 284 135 48 chr2 11893426 11893913 -241362670 + L2 LINE L2 2216 2659 -654 192 111 0 0 chr2 11893913 11893949 -241362634 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 850 284 135 48 chr2 11893949 11894459 -241362124 + L2 LINE L2 2659 3297 -16 2446 145 31 3 chr2 11894459 11894851 -241361732 - MER57A LTR ERV1 0 403 1 850 284 135 48 chr2 11894851 11894869 -241361714 + L2 LINE L2 3297 3312 -1 1743 220 128 15 chr2 11894977 11895431 -241361152 + MLT1D LTR MaLR 1 505 0 2032 58 16 0 chr2 11895592 11895850 -241360733 + AluY SINE Alu 50 311 0 204 338 59 0 chr2 11895856 11895924 -241360659 + L2 LINE L2 3196 3267 -5 1622 152 27 0 chr2 11896724 11896987 -241359596 + AluJb SINE Alu 9 278 -34 276 30 0 0 chr2 11896992 11897025 -241359558 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 2104 88 36 0 chr2 11897192 11897501 -241359082 + AluSx SINE Alu 1 319 0 4352 128 14 2 chr2 11898429 11899056 -241357527 + MER41B LTR ERV1 1 635 0 184 364 99 13 chr2 11899394 11899545 -241357038 - MIR SINE MIR -50 212 49 2327 108 0 0 chr2 11899615 11899921 -241356662 - AluSq SINE Alu -5 308 3 22 0 0 0 chr2 11899928 11899950 -241356633 + AT_rich Low_complexity Low_complexity 1 22 0 1969 154 0 0 chr2 11900593 11900886 -241355697 + AluSx SINE Alu 1 293 -19 323 259 98 76 chr2 11901092 11901328 -241355255 - L1ME4a LINE L1 -51 6070 5830 207 240 0 52 chr2 11901328 11901353 -241355230 + (TA)n Simple_repeat Simple_repeat 1 26 -65 1924 157 3 3 chr2 11901353 11901652 -241354931 - AluSx SINE Alu -13 299 1 207 240 0 52 chr2 11901652 11901677 -241354906 + (TA)n Simple_repeat Simple_repeat 26 51 -40 2301 170 2 38 chr2 11901677 11902095 -241354488 + MER57A LTR ERV1 1 403 0 207 240 0 52 chr2 11902095 11902139 -241354444 + (TA)n Simple_repeat Simple_repeat 51 91 0 226 275 122 8 chr2 11902143 11902274 -241354309 - L1ME4a LINE L1 -1989 5819 5674 2530 164 143 2 chr2 11902296 11902752 -241353831 - MLT2B1 LTR ERVL 0 520 1 281 202 191 12 chr2 11902752 11902836 -241353747 - L1ME4a LINE L1 -462 5659 5561 985 287 54 58 chr2 11903769 11904490 -241352093 - L2 LINE L2 -11 3302 2587 239 277 79 20 chr2 11904605 11904706 -241351877 - MIR SINE MIR -136 126 20 378 325 96 25 chr2 11905013 11905210 -241351373 - MIR SINE MIR -2 260 50 2389 70 0 3 chr2 11906973 11907273 -241349310 - AluY SINE Alu -12 299 1 295 192 0 0 chr2 11907850 11907902 -241348681 + MIR SINE MIR 130 181 -81 21 0 0 0 chr2 11909506 11909527 -241347056 + AT_rich Low_complexity Low_complexity 1 21 0 197 234 47 0 chr2 11910183 11910247 -241346336 + MIR SINE MIR 84 150 -112 2323 100 20 0 chr2 11910398 11910698 -241345885 + AluSc SINE Alu 1 306 -3 303 303 73 0 chr2 11910932 11911041 -241345542 - L2 LINE L2 0 3313 3197 210 259 0 37 chr2 11911960 11912014 -241344569 - L2 LINE L2 -12 3301 3250 * 333 295 29 0 chr2 11912003 11912108 -241344475 - MIR SINE MIR -99 163 56 332 306 12 23 chr2 11913298 11913471 -241343112 + (TATG)n Simple_repeat Simple_repeat 3 173 0 294 188 6 50 chr2 11913486 11913646 -241342937 + (TA)n Simple_repeat Simple_repeat 1 153 0 419 266 9 9 chr2 11913659 11913772 -241342811 + (TATG)n Simple_repeat Simple_repeat 2 114 0 336 200 0 0 chr2 11913816 11913886 -241342697 + (TATATG)n Simple_repeat Simple_repeat 5 74 0 248 261 0 31 chr2 11914756 11914821 -241341762 + MIR SINE MIR 127 189 -73 197 83 28 0 chr2 11915804 11915840 -241340743 + (TCCA)n Simple_repeat Simple_repeat 1 37 0 207 252 27 90 chr2 11915848 11915959 -241340624 - L2 LINE L2 -20 3252 3149 * 216 221 29 0 chr2 11915955 11916023 -241340560 + MIR SINE MIR 147 216 -46 1560 182 3 20 chr2 11916026 11916322 -241340261 - AluJo SINE Alu -7 305 15 195 186 0 0 chr2 11917173 11917216 -241339367 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 755 189 124 0 chr2 11917622 11917760 -241338823 - L1MA9 LINE L1 0 6312 6148 288 0 0 0 chr2 11917760 11917792 -241338791 + (TG)n Simple_repeat Simple_repeat 1 32 0 755 189 124 0 chr2 11917792 11917822 -241338761 - L1MA9 LINE L1 -164 6148 6123 258 293 160 9 chr2 11917822 11917928 -241338655 - MIR3 SINE MIR -42 166 45 840 274 112 6 chr2 11919150 11919490 -241337093 - L1MC4 LINE L1 -197 7845 7470 963 232 82 44 chr2 11919493 11919917 -241336666 - MER45C DNA AcHobo 0 953 441 269 238 40 40 chr2 11919963 11920064 -241336519 - MIR3 SINE MIR -12 196 96 2305 122 0 0 chr2 11920624 11920935 -241335648 + AluSp SINE Alu 1 311 -2 259 346 60 22 chr2 11921649 11921831 -241334752 + L2 LINE L2 3082 3270 -2 302 258 32 11 chr2 11922164 11922257 -241334326 + L2 LINE L2 2942 3036 -236 378 310 113 31 chr2 11922261 11922490 -241334093 - MIR SINE MIR 0 262 15 190 125 0 0 chr2 11922487 11922519 -241334064 + L2 LINE L2 371 402 -2912 * 2231 102 0 16 chr2 11923542 11923857 -241332726 + AluSq SINE Alu 1 310 -3 389 259 15 53 chr2 11923865 11923996 -241332587 + MIR SINE MIR 71 196 -66 261 315 67 11 chr2 11924044 11924133 -241332450 + MIR3 SINE MIR 10 103 -105 902 175 0 110 chr2 11924331 11924559 -241332024 - MLT1B LTR MaLR -187 203 1 195 114 0 0 chr2 11925517 11925552 -241331031 + (A)n Simple_repeat Simple_repeat 1 35 0 356 272 123 0 chr2 11927095 11927209 -241329374 + MIR SINE MIR 25 152 -110 620 275 69 15 chr2 11927484 11927823 -241328760 - L2 LINE L2 -250 3063 2709 282 303 61 15 chr2 11928137 11928269 -241328314 - L2 LINE L2 -38 3234 3097 368 308 68 0 chr2 11928780 11928897 -241327686 - L2 LINE L2 -3 3269 3145 306 344 46 33 chr2 11928916 11929067 -241327516 + L3 LINE CR1 1269 1421 -156 2642 53 0 0 chr2 11930305 11930609 -241325974 - AluY SINE Alu -7 304 1 206 292 0 0 chr2 11930788 11930836 -241325747 + MIR SINE MIR 51 98 -164 180 0 0 0 chr2 11931669 11931689 -241324894 + (A)n Simple_repeat Simple_repeat 1 20 0 296 280 147 42 chr2 11931795 11931938 -241324645 - MIR3 SINE MIR -21 187 30 1711 164 34 24 chr2 11932548 11932840 -241323743 - AluSx SINE Alu -17 295 1 412 249 22 88 chr2 11933004 11933185 -241323398 - MER5B DNA MER1_type -6 172 4 691 196 12 6 chr2 11933561 11933724 -241322859 + L1MA7 LINE L1 6117 6280 -11 198 271 0 0 chr2 11933892 11933940 -241322643 + L2 LINE L2 3266 3313 0 220 330 186 0 chr2 11934387 11934602 -241321981 + L2 LINE L2 2279 2533 -781 180 0 0 0 chr2 11934606 11934626 -241321957 + (T)n Simple_repeat Simple_repeat 1 20 0 287 378 10 31 chr2 11935762 11935955 -241320628 - MER5A DNA MER1_type 0 189 1 242 290 57 53 chr2 11937219 11937464 -241319119 - L2 LINE L2 -188 3084 2839 276 296 103 78 chr2 11937580 11938056 -241318527 + L2 LINE L2 2383 2870 -444 265 300 0 0 chr2 11938276 11938346 -241318237 + L2 LINE L2 3244 3313 0 331 151 0 0 chr2 11938362 11938415 -241318168 - MLT2A2 LTR ERVL 0 453 401 288 229 0 0 chr2 11938418 11938501 -241318082 + (TA)n Simple_repeat Simple_repeat 1 83 0 311 244 47 0 chr2 11938510 11938596 -241317987 - L1MC4 LINE L1 -1339 6703 6614 449 258 0 8 chr2 11938602 11939132 -241317451 + (TA)n Simple_repeat Simple_repeat 1 525 0 323 202 0 91 chr2 11939136 11939235 -241317348 - L1MC4 LINE L1 -1339 6703 6614 240 130 0 0 chr2 11939247 11939293 -241317290 + (TA)n Simple_repeat Simple_repeat 2 47 0 2601 82 69 11 chr2 11939297 11939673 -241316910 - MLT2A1 LTR ERVL -46 398 1 1001 172 18 0 chr2 11940267 11940436 -241316147 + AluSg/x SINE Alu 128 299 -13 533 281 18 6 chr2 11941573 11941740 -241314843 + MER5B DNA MER1_type 6 174 -4 395 290 10 0 chr2 11941794 11941894 -241314689 - MER5A DNA MER1_type -80 109 9 1383 132 168 16 chr2 11942310 11942560 -241314023 - LTR18B LTR ERVL 0 614 327 1603 187 25 16 chr2 11942963 11943284 -241313299 + MLT1A1 LTR MaLR 24 347 -18 252 0 0 0 chr2 11944422 11944450 -241312133 + (TG)n Simple_repeat Simple_repeat 2 29 0 181 250 62 16 chr2 11945146 11945210 -241311373 - MIR SINE MIR -69 139 73 213 108 0 0 chr2 11945349 11945386 -241311197 + (TTCA)n Simple_repeat Simple_repeat 3 39 0 1914 291 197 31 chr2 11945550 11946914 -241309669 + L2 LINE L2 115 1738 -1576 267 31 0 0 chr2 11946914 11946946 -241309637 + (CA)n Simple_repeat Simple_repeat 2 33 0 1914 291 197 31 chr2 11946946 11947042 -241309541 + L2 LINE L2 1738 1817 -1497 416 221 83 66 chr2 11947272 11947453 -241309130 - MLT1J1 LTR MaLR -241 205 22 326 232 0 49 chr2 11947446 11947528 -241309055 + MLT1J2 LTR MaLR 373 450 0 * 182 188 0 21 chr2 11948036 11948084 -241308499 + GA-rich Low_complexity Low_complexity 3 49 0 2210 304 96 23 chr2 11948241 11949606 -241306977 + L2 LINE L2 1842 3312 -1 6791 69 7 20 chr2 11949983 11951742 -241304841 - L1PA7 LINE L1 0 6154 4404 24971 109 13 19 chr2 11951742 11955492 -241301091 - L1PA7 LINE L1 -2408 3738 11 321 68 0 0 chr2 11955792 11955836 -241300747 + (TG)n Simple_repeat Simple_repeat 2 45 0 382 241 141 11 chr2 11956535 11956726 -241299857 + MIR SINE MIR 47 262 0 255 31 0 0 chr2 11957296 11957328 -241299255 + (TG)n Simple_repeat Simple_repeat 1 32 0 1918 222 181 62 chr2 11961887 11962612 -241293971 - MER21B LTR ERV1 -52 811 1 2287 121 0 0 chr2 11963138 11963444 -241293139 - AluSx SINE Alu -6 306 1 2189 100 14 3 chr2 11964818 11965107 -241291476 - AluSg SINE Alu -18 292 1 441 0 0 0 chr2 11966115 11966164 -241290419 + (TG)n Simple_repeat Simple_repeat 2 50 0 306 275 25 17 chr2 11966172 11966292 -241290291 - MER5A DNA MER1_type -34 155 35 352 301 52 20 chr2 11966384 11966537 -241290046 + L2 LINE L2 2924 3081 -232 285 271 121 7 chr2 11968005 11968145 -241288438 + MIR SINE MIR 69 224 -38 2368 97 3 0 chr2 11968173 11968481 -241288102 + AluY SINE Alu 1 309 -2 753 328 104 7 chr2 11968626 11969041 -241287542 + HAL1 LINE L1 4 458 -2049 434 71 0 62 chr2 11969043 11969156 -241287427 + (TTCC)n Simple_repeat Simple_repeat 4 109 0 251 137 0 20 chr2 11969150 11969201 -241287382 + (TCTA)n Simple_repeat Simple_repeat 2 51 0 * 1249 62 6 6 chr2 11969202 11969379 -241287204 + (TTTC)n Simple_repeat Simple_repeat 2 178 0 964 129 20 0 chr2 11969381 11969528 -241287055 - AluJo SINE Alu -7 305 156 659 146 10 0 chr2 11969528 11969631 -241286952 - AluJo SINE Alu -207 105 2 5574 169 42 18 chr2 11969769 11970240 -241286343 - L1MC1 LINE L1 -7 6326 5868 1580 118 5 0 chr2 11970240 11970461 -241286122 - AluSg/x SINE Alu -7 305 84 5574 169 42 18 chr2 11970461 11971117 -241285466 - L1MC1 LINE L1 -465 5868 5172 2474 81 0 3 chr2 11973169 11973476 -241283107 - AluSc SINE Alu -1 308 3 4737 237 83 57 chr2 11973500 11976480 -241280103 - L1MB8 LINE L1 -1 6988 3931 350 287 46 9 chr2 11976877 11977081 -241279502 - L1MB8 LINE L1 -6298 557 92 261 0 0 0 chr2 11977805 11977834 -241278749 + (TG)n Simple_repeat Simple_repeat 2 30 0 197 128 21 0 chr2 11978158 11978205 -241278378 + (CA)n Simple_repeat Simple_repeat 1 48 0 399 148 52 7 chr2 11978227 11978382 -241278201 + (CA)n Simple_repeat Simple_repeat 2 163 0 364 139 57 8 chr2 11978402 11978524 -241278059 + (CA)n Simple_repeat Simple_repeat 2 129 0 183 214 24 0 chr2 11979219 11979261 -241277322 - L2 LINE L2 -4 3309 3267 256 341 12 0 chr2 11980579 11980661 -241275922 - L2 LINE L2 -8 3264 3182 237 297 99 39 chr2 11980885 11981067 -241275516 - MIR SINE MIR -4 258 66 21 0 0 0 chr2 11981278 11981299 -241275284 + AT_rich Low_complexity Low_complexity 1 21 0 1407 167 13 99 chr2 11981721 11981985 -241274598 + AluJb SINE Alu 3 238 -74 3461 64 21 0 chr2 11981985 11982420 -241274163 - MLT2A1 LTR ERVL 0 444 1 1407 167 13 99 chr2 11982420 11982467 -241274116 + AluJb SINE Alu 238 287 -25 22 0 0 0 chr2 11982760 11982782 -241273801 + AT_rich Low_complexity Low_complexity 1 22 0 303 326 77 11 chr2 11982784 11982965 -241273618 + MIR SINE MIR 20 212 -50 285 336 38 0 chr2 11984687 11984818 -241271765 + MIR SINE MIR 121 256 -6 468 178 68 42 chr2 11986421 11986539 -241270044 + MER69 DNA AcHobo 6 126 -2400 924 186 67 74 chr2 11986805 11986978 -241269605 - MER21B LTR ERV1 -128 735 563 1755 114 41 131 chr2 11986978 11987390 -241269193 - THE1C LTR MaLR 0 375 1 924 186 67 74 chr2 11987390 11987485 -241269098 - MER21B LTR ERV1 -300 563 469 1403 194 20 14 chr2 11988337 11988630 -241267953 - L1MD1 LINE L1 0 6242 5948 355 148 0 0 chr2 11988639 11988700 -241267883 - L1MD1 LINE L1 -538 5704 5644 294 217 0 0 chr2 11989169 11989238 -241267345 + CT-rich Low_complexity Low_complexity 2 70 0 265 147 15 29 chr2 11989269 11989337 -241267246 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 669 70 21 65 chr2 11989352 11989538 -241267045 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 601 276 18 18 chr2 11990093 11990310 -241266273 - L1ME3 LINE L1 -2 6160 5944 263 363 14 7 chr2 11990576 11990722 -241265861 - MIR3 SINE MIR -3 205 59 2346 168 8 3 chr2 11990822 11991210 -241265373 + MLT1B LTR MaLR 1 390 0 610 244 21 73 chr2 11991263 11991497 -241265086 - MIR SINE MIR -11 251 30 396 328 0 8 chr2 11994215 11994346 -241262237 + MIR SINE MIR 20 149 -113 662 293 52 4 chr2 11994591 11994820 -241261763 - MIR SINE MIR -22 240 1 204 40 0 0 chr2 11995194 11995219 -241261364 + (A)n Simple_repeat Simple_repeat 1 25 0 202 200 0 0 chr2 11995498 11995538 -241261045 + (TG)n Simple_repeat Simple_repeat 1 40 0 1319 232 21 26 chr2 11995787 11996127 -241260456 + MER46C DNA MER2_type 1 338 0 307 295 62 8 chr2 11996131 11996260 -241260323 - MIR SINE MIR -70 192 57 298 242 63 32 chr2 11996420 11996515 -241260068 + MER5A DNA MER1_type 9 106 -83 944 182 13 89 chr2 11996988 11997224 -241259359 - MER20 DNA MER1_type -1 218 1 423 223 140 70 chr2 11998653 11998953 -241257630 + MER5C DNA MER1_type 1 321 -3 1545 173 24 0 chr2 11999591 11999845 -241256738 + AluJo SINE Alu 36 295 -17 534 216 46 33 chr2 11999925 12000078 -241256505 + MIR SINE MIR 68 222 -40 865 261 29 86 chr2 12000370 12000848 -241255735 - L2 LINE L2 -2 3311 2861 1374 170 25 4 chr2 12001403 12001680 -241254903 + L1MA8 LINE L1 6006 6288 -3 387 277 34 0 chr2 12002036 12002155 -241254428 - MIR SINE MIR -56 152 30 215 327 40 30 chr2 12002327 12002428 -241254155 - L2 LINE L2 -32 3240 3139 440 291 43 52 chr2 12003229 12003463 -241253120 - MLT1J1 LTR MaLR -13 498 202 650 268 81 55 chr2 12003696 12004081 -241252502 + MLT1J LTR MaLR 114 508 -3 881 219 15 5 chr2 12004194 12004390 -241252193 - MER58A DNA MER1_type 0 224 27 1441 200 0 32 chr2 12004713 12004998 -241251585 + AluJb SINE Alu 1 276 -36 2164 104 14 3 chr2 12006691 12006980 -241249603 - AluSg SINE Alu -18 292 1 279 0 0 0 chr2 12007954 12007985 -241248598 + (CA)n Simple_repeat Simple_repeat 2 32 0 320 293 46 9 chr2 12008711 12008915 -241247668 + L1ME3A LINE L1 92 557 -6298 376 336 0 8 chr2 12011062 12011193 -241245390 + MIR SINE MIR 20 149 -113 662 293 52 4 chr2 12011438 12011667 -241244916 - MIR SINE MIR -22 240 1 399 291 0 18 chr2 12013753 12013863 -241242720 - L2 LINE L2 -5 3308 3201 344 287 106 60 chr2 12014029 12014443 -241242140 + L1ME3A LINE L1 4151 4583 -2374 2319 102 0 0 chr2 12015441 12015746 -241240837 - AluY SINE Alu -6 305 1 325 271 121 7 chr2 12015774 12015914 -241240669 - MIR SINE MIR -38 224 69 180 227 76 61 chr2 12016318 12016384 -241240199 - L2 LINE L2 -67 3246 3180 865 306 81 13 chr2 12017948 12018418 -241238165 + L1ME3A LINE L1 6145 6646 -335 318 157 0 0 chr2 12019030 12019080 -241237503 - MLT1A1 LTR MaLR 0 374 325 1775 183 30 11 chr2 12019080 12019441 -241237142 - MER73 LTR ERVL 0 644 277 1554 154 10 29 chr2 12019470 12019776 -241236807 - MER73 LTR ERVL -344 300 1 1112 209 67 47 chr2 12019776 12020073 -241236510 - MLT1A1 LTR MaLR -45 320 18 257 354 12 0 chr2 12021047 12021129 -241235454 - L2 LINE L2 -8 3264 3182 295 291 99 39 chr2 12021354 12021536 -241235047 - MIR SINE MIR -4 258 66 21 0 0 0 chr2 12021747 12021768 -241234815 + AT_rich Low_complexity Low_complexity 1 21 0 1942 128 0 73 chr2 12022194 12022522 -241234061 + AluSx SINE Alu 7 310 -2 1469 226 7 7 chr2 12023588 12023889 -241232694 - AluJb SINE Alu -1 301 1 3290 167 29 10 chr2 12023913 12024429 -241232154 + MER1A DNA MER1_type 1 526 -1 279 79 0 0 chr2 12024492 12024530 -241232053 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 2027 112 3 18 chr2 12024532 12024817 -241231766 - AluSx SINE Alu -31 281 1 285 51 0 0 chr2 12024834 12024873 -241231710 + (TA)n Simple_repeat Simple_repeat 1 39 0 1222 67 6 6 chr2 12026626 12026805 -241229778 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 929 136 20 0 chr2 12026807 12026954 -241229629 - AluJo SINE Alu -7 305 156 702 146 10 0 chr2 12026954 12027057 -241229526 - AluJo SINE Alu -207 105 2 2344 168 86 17 chr2 12027195 12027670 -241228913 - L1MC1 LINE L1 -7 6326 5819 1363 152 5 0 chr2 12027670 12027887 -241228696 - AluSg/x SINE Alu -11 299 82 3072 197 12 3 chr2 12027887 12028542 -241228041 - L1MC1 LINE L1 -501 5832 5172 8105 139 104 35 chr2 12030460 12031930 -241224653 - THE1C-int LTR MaLR -9 1571 1 2325 154 11 16 chr2 12031930 12032307 -241224276 - THE1C LTR MaLR 0 375 1 702 260 116 0 chr2 12032417 12032752 -241223831 - L1MEc LINE L1 -5285 1111 738 505 303 31 65 chr2 12032844 12033227 -241223356 - L1MEc LINE L1 -5918 478 109 400 263 9 26 chr2 12033222 12033336 -241223247 + L1ME1 LINE L1 6060 6330 -4 * 237 257 162 54 chr2 12033393 12033615 -241222968 + L1MD1 LINE L1 4740 4985 -1161 490 118 0 0 chr2 12033646 12033714 -241222869 - AluS SINE Alu -240 69 2 312 19 37 37 chr2 12034888 12034942 -241221641 + (TAGA)n Simple_repeat Simple_repeat 4 57 0 601 122 35 29 chr2 12034995 12035167 -241221416 + (TAGA)n Simple_repeat Simple_repeat 4 176 0 296 244 11 0 chr2 12035198 12035288 -241221295 + GA-rich Low_complexity Low_complexity 2 92 0 381 200 0 0 chr2 12035737 12035812 -241220771 + L1MD1 LINE L1 5644 5718 -524 1480 192 21 14 chr2 12035812 12036100 -241220483 + L1MD1 LINE L1 5950 6242 0 875 193 67 74 chr2 12036952 12037047 -241219536 + MER21B LTR ERV1 469 563 -300 1778 122 44 131 chr2 12037047 12037458 -241219125 + THE1C LTR MaLR 1 375 0 875 193 67 74 chr2 12037458 12037631 -241218952 + MER21B LTR ERV1 563 735 -128 456 178 68 42 chr2 12037897 12038015 -241218568 - MER69 DNA AcHobo -2400 126 6 321 348 28 33 chr2 12039618 12039799 -241216784 - MIR SINE MIR -6 256 77 1913 219 180 63 chr2 12045531 12046257 -241210326 - MER21B LTR ERV1 -52 811 1 2243 124 0 0 chr2 12046783 12047089 -241209494 - AluSx SINE Alu -6 306 1 196 279 62 47 chr2 12048148 12048277 -241208306 + MER5C DNA MER1_type 21 151 -173 450 291 43 52 chr2 12048293 12048527 -241208056 - MLT1J1 LTR MaLR -13 498 202 674 270 75 49 chr2 12048760 12049145 -241207438 + MLT1J LTR MaLR 114 508 -3 1132 187 5 5 chr2 12049258 12049456 -241207127 - MER58A DNA MER1_type 0 224 27 1784 139 0 28 chr2 12049779 12050066 -241206517 + AluJb SINE Alu 1 279 -33 181 370 30 10 chr2 12050287 12050387 -241206196 + MIR SINE MIR 93 194 -68 399 291 0 18 chr2 12052892 12053002 -241203581 - L2 LINE L2 -5 3308 3201 296 287 109 63 chr2 12053168 12053582 -241203001 + L1M4 LINE L1 3340 3772 -2374 2612 151 17 2 chr2 12054391 12054809 -241201774 - L1MB1 LINE L1 0 6168 5745 563 105 35 0 chr2 12054809 12054895 -241201688 + L1M3 LINE L1 5402 5490 -844 1305 170 74 22 chr2 12054897 12055231 -241201352 + MSTD LTR MaLR 1 396 0 1337 155 8 45 chr2 12055231 12055476 -241201107 + L1M3 LINE L1 5498 5733 -601 246 327 63 20 chr2 12055576 12055675 -241200908 + MIR SINE MIR 61 164 -44 203 270 27 40 chr2 12056875 12056949 -241199634 + MIR SINE MIR 117 189 -73 2481 137 8 14 chr2 12057835 12058201 -241198382 - THE1B LTR MaLR 0 364 1 1797 264 106 11 chr2 12058321 12058848 -241197735 - MLT1E LTR MaLR -7 586 10 202 356 74 18 chr2 12058973 12059136 -241197447 + L2 LINE L2 2590 2761 -553 24 0 0 0 chr2 12059693 12059717 -241196866 + AT_rich Low_complexity Low_complexity 1 24 0 225 0 0 0 chr2 12060722 12060747 -241195836 + (A)n Simple_repeat Simple_repeat 1 25 0 229 175 0 48 chr2 12061222 12061265 -241195318 + (TTCA)n Simple_repeat Simple_repeat 1 42 -18 907 217 56 0 chr2 12061265 12061463 -241195120 + MER3 DNA MER1_type 1 209 0 229 175 0 48 chr2 12061463 12061482 -241195101 + (TTCA)n Simple_repeat Simple_repeat 42 60 0 25 0 0 0 chr2 12061695 12061720 -241194863 + AT_rich Low_complexity Low_complexity 1 25 0 318 26 0 0 chr2 12063206 12063245 -241193338 + (TG)n Simple_repeat Simple_repeat 2 40 0 244 320 39 0 chr2 12063460 12063563 -241193020 + L3b LINE CR1 1241 1347 -236 269 276 33 98 chr2 12063631 12063906 -241192677 - L2 LINE L2 -187 3085 2829 2406 110 123 5 chr2 12066054 12066437 -241190146 + MSTA LTR MaLR 1 428 0 2466 88 0 0 chr2 12066747 12067055 -241189528 - AluSc SINE Alu -1 308 1 2294 139 55 31 chr2 12067574 12067992 -241188591 + MSTA LTR MaLR 1 428 0 188 316 98 60 chr2 12068004 12068137 -241188446 + L2 LINE L2 3127 3264 -8 254 207 0 0 chr2 12068254 12068312 -241188271 + L1MC4 LINE L1 6647 6704 -1338 333 215 15 0 chr2 12068506 12068571 -241188012 + L2 LINE L2 3193 3258 -55 391 202 55 55 chr2 12069147 12069330 -241187253 + L1MC5 LINE L1 7624 7806 -155 234 322 28 18 chr2 12069501 12069634 -241186949 - MIR3 SINE MIR -42 166 45 753 135 21 64 chr2 12069883 12070022 -241186561 + LTR39 LTR ERV1 2 134 -649 3562 139 214 13 chr2 12070022 12070792 -241185791 + MER21A LTR ERV1 1 925 -6 622 93 10 0 chr2 12070801 12070898 -241185685 + LTR39 LTR ERV1 133 230 -553 3701 153 21 40 chr2 12070901 12071626 -241184957 + MER50 LTR ERV1 1 711 -23 2746 184 12 38 chr2 12071664 12071871 -241184712 + LTR39 LTR ERV1 223 434 -349 2242 114 3 0 chr2 12071871 12072170 -241184413 - AluSx SINE Alu -12 300 1 2746 184 12 38 chr2 12072170 12072538 -241184045 + LTR39 LTR ERV1 434 783 0 2324 226 41 18 chr2 12073988 12074595 -241181988 + MLT1E2 LTR MaLR 1 621 -5 991 113 0 0 chr2 12074680 12074821 -241181762 + AluSc SINE Alu 168 308 -1 311 354 39 50 chr2 12075559 12075740 -241180843 - L1MEc LINE L1 -6024 372 194 1877 166 3 3 chr2 12075745 12076046 -241180537 - AluJb SINE Alu -3 309 9 3171 140 34 6 chr2 12076076 12076583 -241180000 + MER1A DNA MER1_type 1 521 -8 315 71 0 0 chr2 12076655 12076697 -241179886 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 2022 112 3 18 chr2 12076699 12076984 -241179599 - AluSx SINE Alu -31 281 1 363 23 0 0 chr2 12077000 12077044 -241179539 + (TA)n Simple_repeat Simple_repeat 1 44 0 1894 144 0 72 chr2 12079374 12079707 -241176876 - AluSx SINE Alu -2 310 2 1385 188 44 44 chr2 12079746 12080066 -241176517 + MLT1A1 LTR MaLR 1 320 -45 1440 149 10 36 chr2 12080066 12080374 -241176209 + MER73 LTR ERVL 1 300 -344 1653 177 28 11 chr2 12080403 12080765 -241175818 + MER73 LTR ERVL 277 644 0 292 157 0 0 chr2 12080765 12080815 -241175768 + MLT1A1 LTR MaLR 316 365 0 942 297 56 18 chr2 12081452 12082320 -241174263 - L1ME LINE L1 -354 5808 4906 355 263 9 26 chr2 12082515 12082629 -241173954 - L1ME1 LINE L1 -4 6330 6060 * 425 311 34 48 chr2 12082624 12082917 -241173666 + L1MEc LINE L1 109 397 -5999 572 260 116 0 chr2 12083099 12083434 -241173149 + L1MEc LINE L1 738 1111 -5285 2169 151 11 16 chr2 12083544 12083921 -241172662 + THE1C LTR MaLR 1 375 0 7565 138 105 35 chr2 12083921 12085393 -241171190 + THE1C-int LTR MaLR 1 1574 -6 2023 168 16 16 chr2 12085399 12085774 -241170809 + THE1C LTR MaLR 1 375 0 2254 131 8 37 chr2 12086112 12086487 -241170096 - THE1B LTR MaLR 0 364 1 182 288 34 85 chr2 12086844 12086897 -241169686 + MIR SINE MIR 21 75 -187 2023 154 10 46 chr2 12086897 12087286 -241169297 + THE1C LTR MaLR 1 375 0 182 288 34 85 chr2 12087286 12087350 -241169233 + MIR SINE MIR 75 132 -130 2011 164 0 0 chr2 12088154 12088452 -241168131 - AluSx SINE Alu -14 298 1 23 78 0 0 chr2 12088800 12088851 -241167732 + AT_rich Low_complexity Low_complexity 1 51 0 306 209 23 23 chr2 12089073 12089159 -241167424 - MLT1J2 LTR MaLR -2 448 363 1317 203 137 34 chr2 12090146 12090590 -241165993 - L1MC5 LINE L1 -499 7462 6973 348 24 0 0 chr2 12090965 12091006 -241165577 + (GA)n Simple_repeat Simple_repeat 2 42 0 526 312 17 0 chr2 12091023 12091196 -241165387 - MLT1J2 LTR MaLR -274 176 1 281 182 82 39 chr2 12092491 12092604 -241163979 - MLT1J2 LTR MaLR -2 444 336 792 190 40 6 chr2 12092805 12092979 -241163604 + MER3 DNA MER1_type 1 180 -29 1574 70 8 66 chr2 12093274 12093518 -241163065 + MER30 DNA MER1_type 1 230 0 2213 126 0 13 chr2 12094576 12094885 -241161698 - AluSx SINE Alu -7 305 1 184 265 78 59 chr2 12095598 12095700 -241160883 + MIR SINE MIR 33 136 -72 226 345 103 0 chr2 12096557 12096673 -241159910 + L1MC/D LINE L1 5518 5645 -2163 411 56 0 0 chr2 12096820 12096874 -241159709 + (TG)n Simple_repeat Simple_repeat 2 55 0 349 305 85 61 chr2 12096877 12097123 -241159460 + L3 LINE CR1 923 1174 -403 1599 190 13 13 chr2 12097684 12097989 -241158594 + AluJo SINE Alu 1 305 -7 1215 246 40 70 chr2 12098005 12098435 -241158148 + MLT1J LTR MaLR 95 511 0 258 247 35 0 chr2 12098880 12098965 -241157618 - HAL1 LINE L1 -343 2164 2077 568 371 96 19 chr2 12099265 12099629 -241156954 - HAL1 LINE L1 -581 1926 1535 645 306 27 27 chr2 12100349 12100610 -241155973 + MIR SINE MIR 2 262 0 1312 243 41 17 chr2 12101048 12101464 -241155119 + MER31A LTR ERV1 56 481 -4 30 27 0 0 chr2 12101975 12102012 -241154571 + AT_rich Low_complexity Low_complexity 1 37 0 341 226 108 0 chr2 12102935 12103037 -241153546 + L2 LINE L2 1906 2018 -1296 202 330 115 35 chr2 12103061 12103322 -241153261 + L2 LINE L2 2157 2438 -876 225 206 0 0 chr2 12103709 12103772 -241152811 - L1MB8 LINE L1 -237 5941 5879 2435 171 5 18 chr2 12103840 12104280 -241152303 - Tigger2a DNA MER2_type 0 434 1 320 344 73 9 chr2 12104312 12104629 -241151954 - L1MB8 LINE L1 -335 5835 5499 2873 241 70 35 chr2 12104633 12106113 -241150470 - L1MEc LINE L1 -3125 3004 1513 833 110 123 7 chr2 12106118 12106273 -241150310 - LTR47A LTR ERVL -6 446 274 272 191 0 32 chr2 12106534 12106597 -241149986 - L1MEc LINE L1 -4764 1367 1307 587 281 63 24 chr2 12106676 12106929 -241149654 - LTR16C LTR ERVL -36 455 193 792 236 73 20 chr2 12107375 12107773 -241148810 - L1MEc LINE L1 -2962 3167 2749 258 305 36 6 chr2 12107756 12107923 -241148660 - HAL1 LINE L1 -1221 1286 1115 * 270 279 60 60 chr2 12108348 12108531 -241148052 - L1MEc LINE L1 -5638 481 299 279 0 0 0 chr2 12108670 12108701 -241147882 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 360 277 26 52 chr2 12108737 12108892 -241147691 - L1MEc LINE L1 -5966 153 3 342 294 159 23 chr2 12109098 12109312 -241147271 - MIR SINE MIR -11 251 9 1409 136 11 11 chr2 12109781 12110045 -241146538 + L1MA9 LINE L1 6043 6306 -6 195 100 0 0 chr2 12110046 12110076 -241146507 + (TA)n Simple_repeat Simple_repeat 2 31 0 1501 209 47 70 chr2 12111136 12111187 -241145396 + MLT1A1 LTR MaLR 1 52 -313 2329 100 3 3 chr2 12111187 12111498 -241145085 + AluSp SINE Alu 1 311 -2 1501 209 47 70 chr2 12111498 12111829 -241144754 + MLT1A1 LTR MaLR 52 365 0 2327 118 0 0 chr2 12112327 12112633 -241143950 - AluSq SINE Alu -7 306 1 2104 105 0 52 chr2 12112637 12112943 -241143640 - AluSc SINE Alu -19 290 1 275 188 0 0 chr2 12112992 12113056 -241143527 + MER53 DNA DNA 98 161 -28 * 295 242 11 0 chr2 12112999 12113090 -241143493 - MER53 DNA DNA -94 95 4 362 303 28 9 chr2 12113157 12113266 -241143317 + MIR SINE MIR 40 150 -112 498 299 140 43 chr2 12113315 12113335 -241143248 + MLT1J2 LTR MaLR 44 61 -389 2091 145 22 27 chr2 12113335 12113701 -241142882 + THE1B LTR MaLR 1 364 0 498 299 140 43 chr2 12113701 12113942 -241142641 + MLT1J2 LTR MaLR 61 354 -96 207 0 0 0 chr2 12113942 12113965 -241142618 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 498 299 140 43 chr2 12113965 12114073 -241142510 + MLT1J2 LTR MaLR 354 450 0 818 204 0 12 chr2 12114869 12115041 -241141542 - MLT1B LTR MaLR 0 467 298 21 0 0 0 chr2 12115117 12115138 -241141445 + AT_rich Low_complexity Low_complexity 1 21 0 677 188 18 100 chr2 12115138 12115308 -241141275 - FRAM SINE Alu -21 155 1 904 146 58 6 chr2 12115309 12115480 -241141103 - MLT1B LTR MaLR -210 180 1 417 180 0 0 chr2 12115974 12116063 -241140520 + (TA)n Simple_repeat Simple_repeat 1 89 0 52 17 0 0 chr2 12116063 12116122 -241140461 + AT_rich Low_complexity Low_complexity 1 59 0 721 197 0 0 chr2 12116123 12116245 -241140338 - FLAM_C SINE Alu -11 122 1 281 247 12 0 chr2 12116697 12116778 -241139805 + MLT1J1 LTR MaLR 364 445 -1 452 256 65 33 chr2 12117018 12117214 -241139369 - MIR3 SINE MIR 0 208 1 536 282 13 6 chr2 12117295 12117451 -241139132 + MIR SINE MIR 54 210 -52 233 393 12 24 chr2 12117987 12118155 -241138428 - MIR SINE MIR -50 212 47 355 184 70 0 chr2 12118911 12119025 -241137558 - MER69 DNA AcHobo -91 2435 2314 640 287 84 24 chr2 12119070 12119321 -241137262 + L2 LINE L2 3045 3310 -3 309 321 60 36 chr2 12119576 12119744 -241136839 + L2 LINE L2 2118 2289 -1025 261 263 53 11 chr2 12120724 12120819 -241135764 + HAL1b LINE L1 669 767 -581 758 265 78 81 chr2 12121104 12121208 -241135375 + L1MC4a LINE L1 5266 5369 -2439 1849 165 13 3 chr2 12121208 12121511 -241135072 + AluJb SINE Alu 1 306 -6 758 265 78 81 chr2 12121511 12122071 -241134512 + L1MC4a LINE L1 5369 5928 -1880 200 304 104 44 chr2 12122142 12122277 -241134306 - MIR3 SINE MIR -65 143 1 199 378 76 43 chr2 12122277 12122564 -241134019 - L2 LINE L2 -47 3225 2929 249 83 0 0 chr2 12122564 12122600 -241133983 + (TGAA)n Simple_repeat Simple_repeat 2 37 0 826 341 106 20 chr2 12122600 12123202 -241133381 - L2 LINE L2 -6 3307 2600 1940 92 30 4 chr2 12123202 12123464 -241133119 + AluSq SINE Alu 36 304 -9 826 341 106 20 chr2 12123464 12123711 -241132872 - L2 LINE L2 -713 2600 2376 25 0 0 0 chr2 12123894 12123919 -241132664 + AT_rich Low_complexity Low_complexity 1 25 0 442 256 41 58 chr2 12123926 12124098 -241132485 - MIR SINE MIR -73 189 21 185 180 20 0 chr2 12124122 12124172 -241132411 + CT-rich Low_complexity Low_complexity 1 51 0 1077 210 53 3 chr2 12124197 12124525 -241132058 - MER33 DNA MER1_type -19 305 1 2059 165 71 15 chr2 12124616 12125023 -241131560 - MSTB1 LTR MaLR 0 432 3 560 239 11 64 chr2 12126092 12126280 -241130303 + MER5B DNA MER1_type 1 178 0 542 209 15 0 chr2 12126388 12126522 -241130061 - Charlie1 DNA MER1_type 0 2761 2626 3550 166 27 11 chr2 12126563 12127220 -241129363 - MSTA-int LTR MaLR -983 668 1 2601 167 7 0 chr2 12127220 12127645 -241128938 - MSTA LTR MaLR 0 428 1 26 0 0 0 chr2 12128716 12128742 -241127841 + AT_rich Low_complexity Low_complexity 1 26 0 1827 151 0 14 chr2 12128742 12129033 -241127550 - AluSx SINE Alu -25 287 1 289 247 93 41 chr2 12129040 12129137 -241127446 + MIR SINE MIR 74 175 -87 200 274 48 0 chr2 12129518 12129580 -241127003 - MIR SINE MIR -117 145 81 1156 80 0 12 chr2 12129733 12129896 -241126687 - L1PA7 LINE L1 0 6154 5994 24 0 0 0 chr2 12130189 12130213 -241126370 + AT_rich Low_complexity Low_complexity 1 24 0 1729 168 30 0 chr2 12130492 12130831 -241125752 - MLT1B LTR MaLR 0 390 42 339 263 34 69 chr2 12130973 12131148 -241125435 + L1ME LINE L1 1030 1198 -5174 293 273 81 41 chr2 12131152 12131644 -241124939 + L1ME LINE L1 1101 1589 -4793 278 270 74 20 chr2 12131773 12131921 -241124662 - L1MC4a LINE L1 -1799 6009 5854 804 287 61 48 chr2 12132461 12133365 -241123218 - L1MEc LINE L1 -4602 2223 1148 458 405 25 25 chr2 12133814 12134211 -241122372 - L1MEc LINE L1 -5857 968 572 331 292 77 32 chr2 12134296 12134673 -241121910 + L1ME LINE L1 2346 2739 -3643 * 1228 260 53 80 chr2 12134672 12135296 -241121287 - L1MEc LINE L1 -5931 611 5 676 267 39 41 chr2 12135839 12136427 -241120156 - L1MEc LINE L1 -2974 3376 2708 300 221 123 26 chr2 12136666 12136820 -241119763 - L1MEc LINE L1 -4093 2438 2270 538 315 110 67 chr2 12137042 12137477 -241119106 - L1MEc LINE L1 -4581 1950 1497 238 258 31 10 chr2 12137482 12137579 -241119004 - L1ME LINE L1 -4553 1728 1630 420 288 57 36 chr2 12137582 12137820 -241118763 - L1ME LINE L1 -5009 1345 1115 2534 59 0 0 chr2 12137820 12138124 -241118459 + AluY SINE Alu 3 306 -5 420 288 57 36 chr2 12138124 12138163 -241118420 - L1ME LINE L1 -5239 1115 1078 1433 183 14 57 chr2 12138870 12139219 -241117364 + MLT1A1 LTR MaLR 1 334 -31 311 266 88 24 chr2 12140705 12140860 -241115723 - MIR SINE MIR -63 145 27 280 259 137 61 chr2 12141433 12141630 -241114953 - MIR SINE MIR -11 251 40 2354 101 0 0 chr2 12141631 12141937 -241114646 - AluSx SINE Alu -6 306 1 1952 138 51 28 chr2 12141961 12142317 -241114266 + THE1B LTR MaLR 1 364 0 206 328 0 0 chr2 12143377 12143435 -241113148 + L2 LINE L2 3215 3272 0 277 322 37 39 chr2 12143819 12144124 -241112459 - L2 LINE L2 -238 3034 2670 307 378 35 21 chr2 12145015 12145158 -241111425 - L2 LINE L2 -1 3271 3127 932 240 137 35 chr2 12145169 12145761 -241110822 - Charlie7 DNA MER1_type 0 2612 1961 4105 208 52 18 chr2 12145776 12145922 -241110661 + L1MB5 LINE L1 4108 4248 -1926 195 42 0 0 chr2 12145922 12145946 -241110637 + (CA)n Simple_repeat Simple_repeat 1 24 0 4105 208 52 18 chr2 12145946 12147792 -241108791 + L1MB5 LINE L1 4248 6167 -7 3953 198 56 6 chr2 12147792 12148771 -241107812 + MER45R DNA AcHobo 551 1578 -3 2656 187 19 67 chr2 12149174 12149817 -241106766 - LTR9 LTR ERV1 0 612 1 294 315 109 36 chr2 12150653 12150818 -241105765 + MIR SINE MIR 86 262 0 252 308 49 53 chr2 12151525 12151702 -241104881 + MIR SINE MIR 16 190 -57 1934 116 87 0 chr2 12152829 12153104 -241103479 - AluSx SINE Alu -13 299 1 623 327 137 27 chr2 12153104 12153578 -241103005 - L1MDa LINE L1 -4449 2091 1566 290 348 78 16 chr2 12154225 12154481 -241102102 - L2 LINE L2 -812 2502 2231 1192 183 5 5 chr2 12154660 12154907 -241101676 + AluJb SINE Alu 81 327 0 305 333 8 15 chr2 12154953 12155085 -241101498 + MIR3 SINE MIR 71 201 -7 4869 61 8 2 chr2 12155318 12155940 -241100643 + L1PA7 LINE L1 5527 6152 -2 314 331 101 22 chr2 12156258 12156397 -241100186 + L2 LINE L2 3122 3271 -1 419 345 46 11 chr2 12157624 12157798 -241098785 + MIR SINE MIR 47 226 -36 302 205 13 77 chr2 12157800 12157878 -241098705 - MIR3 SINE MIR -42 166 94 236 312 66 9 chr2 12157929 12158037 -241098546 - MIR SINE MIR -110 98 22 218 277 90 77 chr2 12158359 12158514 -241098069 + MIR SINE MIR 48 204 -58 254 308 39 0 chr2 12158730 12158808 -241097775 + MIR SINE MIR 118 198 -64 222 309 52 21 chr2 12160317 12160414 -241096169 + MIR SINE MIR 72 171 -91 198 258 200 71 chr2 12160937 12161092 -241095491 + MIR SINE MIR 88 262 0 22 0 0 0 chr2 12161457 12161479 -241095104 + AT_rich Low_complexity Low_complexity 1 22 0 2220 136 21 104 chr2 12162399 12162870 -241093713 - MSTB1 LTR MaLR 0 432 1 408 311 25 0 chr2 12163259 12163378 -241093205 - L2 LINE L2 -15 3298 3177 188 344 115 8 chr2 12163453 12163575 -241093008 + L2 LINE L2 2627 2761 -553 365 300 67 29 chr2 12164428 12164638 -241091945 - L2 LINE L2 -371 2943 2726 232 335 0 4 chr2 12165109 12165221 -241091362 + MER91B DNA MER1_type 1 111 -29 182 245 151 0 chr2 12165620 12165673 -241090910 + L2 LINE L2 3161 3221 -51 279 0 0 0 chr2 12165762 12165793 -241090790 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 220 307 80 13 chr2 12166554 12166629 -241089954 - L2 LINE L2 -27 3245 3166 4740 162 29 46 chr2 12166742 12167629 -241088954 + MER4D LTR ERV1 1 872 0 218 231 77 0 chr2 12167642 12167694 -241088889 + MIR SINE MIR 93 148 -60 465 125 0 0 chr2 12168896 12168968 -241087615 - L1P LINE L1 -747 5409 5338 4926 121 23 6 chr2 12168969 12169697 -241086886 + L1PA16 LINE L1 5426 6166 0 1699 187 59 44 chr2 12169697 12170077 -241086506 + Charlie1 DNA MER1_type 2149 2540 -221 2337 54 4 0 chr2 12170077 12170381 -241086202 + AluY SINE Alu 2 306 0 1699 187 59 44 chr2 12170381 12170474 -241086109 + Charlie1 DNA MER1_type 2540 2630 -131 306 344 52 28 chr2 12170677 12171040 -241085543 - HAL1b LINE L1 -809 539 168 260 280 129 8 chr2 12173191 12173323 -241083260 + MIR3 SINE MIR 40 187 -21 316 350 55 31 chr2 12173464 12173627 -241082956 + L2 LINE L2 3096 3262 -10 272 297 0 14 chr2 12173879 12173953 -241082630 - L2 LINE L2 0 3272 3200 1975 153 3 0 chr2 12174523 12174823 -241081760 - AluJb SINE Alu -11 301 1 182 216 27 0 chr2 12175011 12175048 -241081535 + MIR SINE MIR 85 122 -140 1629 201 23 50 chr2 12177723 12178107 -241078476 - MLT1A2 LTR MaLR 0 374 1 1513 161 50 101 chr2 12178180 12178558 -241078025 + MLT1A1 LTR MaLR 5 363 -2 410 280 62 101 chr2 12179379 12179571 -241077012 - L2 LINE L2 0 3272 3074 3383 187 94 13 chr2 12179571 12180244 -241076339 - LTR8A LTR ERV1 0 727 1 410 280 62 101 chr2 12180244 12180785 -241075798 - L2 LINE L2 -198 3074 2551 319 309 99 25 chr2 12181984 12182227 -241074356 + MIR SINE MIR 2 262 0 214 338 14 14 chr2 12182751 12182825 -241073758 + MIR SINE MIR 21 94 -114 237 65 0 0 chr2 12183596 12183627 -241072956 + (A)n Simple_repeat Simple_repeat 1 31 0 183 421 33 8 chr2 12184521 12184642 -241071941 - L2 LINE L2 -1 3271 3148 265 381 24 0 chr2 12185026 12185152 -241071431 - L2 LINE L2 -212 3060 2932 290 241 213 21 chr2 12185733 12185874 -241070709 + MIR3 SINE MIR 36 203 -5 197 347 165 0 chr2 12185963 12186084 -241070499 - MIR SINE MIR -16 246 106 1088 232 66 74 chr2 12186655 12187035 -241069548 - MLT1B LTR MaLR -4 386 10 447 289 39 56 chr2 12187135 12187236 -241069347 + MER5B DNA MER1_type 2 103 -75 2051 151 74 57 chr2 12187236 12187275 -241069308 - MLT2D LTR ERVL 0 414 377 384 22 0 0 chr2 12187275 12187320 -241069263 + (TG)n Simple_repeat Simple_repeat 2 46 0 2051 151 74 57 chr2 12187320 12187684 -241068899 - MLT2D LTR ERVL -37 377 4 447 289 39 56 chr2 12187684 12187696 -241068887 + MER5B DNA MER1_type 103 114 -64 2187 117 0 16 chr2 12187696 12188005 -241068578 - AluSx SINE Alu -8 304 1 447 289 39 56 chr2 12188005 12188070 -241068513 + MER5B DNA MER1_type 114 178 0 366 198 76 151 chr2 12188196 12188368 -241068215 - MER5B DNA MER1_type -3 175 17 183 125 75 25 chr2 12189229 12189269 -241067314 - MIR SINE MIR -185 77 36 498 218 0 0 chr2 12189302 12189458 -241067125 + (CA)n Simple_repeat Simple_repeat 2 157 0 291 324 65 74 chr2 12189460 12189905 -241066678 - L2 LINE L2 -13 3259 2819 2363 105 0 0 chr2 12190239 12190543 -241066040 + AluSx SINE Alu 1 304 -8 194 429 14 23 chr2 12190590 12190809 -241065774 + L2 LINE L2 2867 3083 -189 2169 173 52 26 chr2 12191132 12191553 -241065030 + MSTB1 LTR MaLR 1 432 0 1881 176 0 0 chr2 12191993 12192288 -241064295 + AluJo SINE Alu 1 295 -17 424 275 101 7 chr2 12193283 12193432 -241063151 - MLT1L LTR MaLR -123 492 330 7073 97 34 3 chr2 12194203 12195233 -241061350 + L1MA1 LINE L1 5238 6298 -4 2374 78 7 0 chr2 12195726 12196022 -241060561 + AluY SINE Alu 1 298 -13 311 263 150 15 chr2 12196029 12196162 -241060421 - MIR3 SINE MIR -28 180 30 1833 156 17 0 chr2 12196490 12196657 -241059926 - AluSx SINE Alu -12 300 124 279 0 0 0 chr2 12196657 12196688 -241059895 + (TG)n Simple_repeat Simple_repeat 2 32 0 1833 156 17 0 chr2 12196688 12196815 -241059768 - AluSx SINE Alu -188 124 1 355 313 53 0 chr2 12196965 12197096 -241059487 - MIR SINE MIR -37 225 88 1137 245 66 78 chr2 12199533 12199957 -241056626 + MLT1H LTR MaLR 3 421 -128 357 330 38 16 chr2 12200059 12200244 -241056339 - L2 LINE L2 -477 2837 2649 437 269 31 51 chr2 12201509 12201695 -241054888 - MIR SINE MIR -78 130 3 184 254 84 28 chr2 12201701 12201772 -241054811 - MIR3 SINE MIR -53 155 81 551 234 16 0 chr2 12202549 12202673 -241053910 - MER45A DNA AcHobo 0 178 53 367 343 12 35 chr2 12202880 12203052 -241053531 - MIR3 SINE MIR -37 171 4 273 323 129 46 chr2 12204018 12204235 -241052348 + L2 LINE L2 2185 2419 -895 515 289 109 0 chr2 12204444 12204600 -241051983 - MIR SINE MIR -84 178 6 1907 197 7 61 chr2 12204601 12205012 -241051571 + MLT1B LTR MaLR 2 390 0 201 245 0 0 chr2 12205720 12205769 -241050814 + (TGAA)n Simple_repeat Simple_repeat 3 51 0 267 248 50 50 chr2 12205791 12205912 -241050671 - LTR67 LTR ERVL -8 549 429 1360 209 26 11 chr2 12206748 12207021 -241049562 - AluJo SINE Alu -30 282 6 258 300 17 0 chr2 12207435 12207540 -241049043 + MIR SINE MIR 59 166 -64 1427 194 101 44 chr2 12207559 12207925 -241048658 - L1MB2 LINE L1 0 6171 5785 * 1450 215 34 11 chr2 12207923 12208305 -241048278 - L1M4c LINE L1 -3987 2397 2007 941 178 7 0 chr2 12208333 12208485 -241048098 - FRAM SINE Alu -30 146 1 455 230 0 58 chr2 12208495 12208634 -241047949 - L1M4c LINE L1 -4479 1905 1775 23 33 0 0 chr2 12208645 12208675 -241047908 + AT_rich Low_complexity Low_complexity 1 30 0 3411 11 0 0 chr2 12209035 12209412 -241047171 - L1HS LINE L1 -2 6153 5777 4526 21 0 0 chr2 12209412 12209935 -241046648 + L1P LINE L1 4245 4767 -1379 292 283 61 10 chr2 12210568 12210667 -241045916 + MIR SINE MIR 44 147 -61 2861 142 12 25 chr2 12211816 12212301 -241044282 + L1MA5 LINE L1 5812 6290 -10 251 336 185 14 chr2 12212462 12212608 -241043975 - MIR SINE MIR -64 144 22 200 323 95 13 chr2 12213115 12213273 -241043310 + MIR SINE MIR 86 256 -6 227 327 89 71 chr2 12213488 12213656 -241042927 - MIR SINE MIR -75 187 17 266 320 76 33 chr2 12216363 12216514 -241040069 + MIR3 SINE MIR 1 162 -66 240 278 106 33 chr2 12216942 12217093 -241039490 + MIR SINE MIR 48 209 -53 204 349 48 60 chr2 12217763 12217846 -241038737 - L2 LINE L2 -29 3243 3162 * 348 372 31 21 chr2 12217841 12218032 -241038551 - L2 LINE L2 -568 2746 2554 635 295 74 9 chr2 12218063 12218280 -241038303 - MIR SINE MIR -14 248 18 985 260 15 7 chr2 12218685 12218954 -241037629 - L1ME LINE L1 -505 5661 5391 5179 123 80 5 chr2 12218964 12219810 -241036773 - Tigger1 DNA MER2_type -1508 910 1 605 260 85 0 chr2 12219810 12220056 -241036527 - L1ME LINE L1 -1513 4633 4367 304 295 0 13 chr2 12220508 12220586 -241035997 + MIR SINE MIR 52 128 -80 633 299 120 4 chr2 12220701 12220935 -241035648 - MIR SINE MIR 0 262 2 248 186 0 17 chr2 12220965 12221024 -241035559 + L1MCa LINE L1 2006 2063 -4363 212 189 0 0 chr2 12221073 12221110 -241035473 + (TA)n Simple_repeat Simple_repeat 1 37 0 235 291 149 30 chr2 12222739 12222873 -241033710 - MIR3 SINE MIR -17 191 42 1949 119 46 3 chr2 12222881 12223166 -241033417 + AluSx SINE Alu 1 297 -15 2897 6 0 0 chr2 12223350 12223661 -241032922 + AluYb8 SINE Alu 3 313 -5 761 185 1 10 chr2 12223980 12224126 -241032457 + MLT1C LTR MaLR 337 466 -1 261 346 6 27 chr2 12224336 12224508 -241032075 - MIR SINE MIR -64 198 35 383 328 143 51 chr2 12224983 12225146 -241031437 - L3 LINE CR1 -3 1574 1427 1909 128 35 0 chr2 12225146 12225428 -241031155 - AluSx SINE Alu -20 292 1 383 328 143 51 chr2 12225428 12225557 -241031026 - L3 LINE CR1 -150 1427 1255 189 107 0 0 chr2 12225617 12225645 -241030938 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 287 276 16 81 chr2 12225679 12225726 -241030857 - MIR SINE MIR 0 262 214 1835 205 65 75 chr2 12225726 12226282 -241030301 + MLT2B3 LTR ERVL 1 550 -4 287 276 16 81 chr2 12226282 12226357 -241030226 - MIR SINE MIR -48 214 148 232 305 65 52 chr2 12227491 12227756 -241028827 - L2 LINE L2 -92 3180 2860 1160 307 132 11 chr2 12228142 12228611 -241027972 - MLT1G LTR MaLR -55 535 10 1302 270 81 41 chr2 12229677 12230244 -241026339 - MLT1G LTR MaLR 0 590 1 474 291 174 34 chr2 12230259 12230730 -241025853 - L2 LINE L2 -901 2413 1877 21 89 0 0 chr2 12230745 12230801 -241025782 + AT_rich Low_complexity Low_complexity 1 56 0 220 292 21 62 chr2 12231029 12231125 -241025458 + L2 LINE L2 1038 1129 -2185 353 316 76 0 chr2 12231151 12231309 -241025274 + L2 LINE L2 1256 1425 -1889 416 260 79 0 chr2 12232235 12232362 -241024221 + L2 LINE L2 3169 3305 -8 3233 155 38 2 chr2 12233048 12233622 -241022961 + LTR49 LTR ERV1 1 595 0 24 32 0 0 chr2 12233948 12233979 -241022604 + AT_rich Low_complexity Low_complexity 1 31 0 379 149 68 27 chr2 12234313 12234387 -241022196 - LTR29 LTR ERV1 -115 503 404 343 150 0 0 chr2 12235344 12235404 -241021179 - L1PA16 LINE L1 -10 6156 6097 29 28 0 0 chr2 12236555 12236591 -241019992 + AT_rich Low_complexity Low_complexity 1 36 0 536 207 174 117 chr2 12236778 12237170 -241019413 - LTR50 LTR ERVL -324 471 58 195 129 0 0 chr2 12237315 12237346 -241019237 + (A)n Simple_repeat Simple_repeat 1 31 0 696 277 51 45 chr2 12237691 12238027 -241018556 - L1MC4 LINE L1 -571 7471 7134 1842 196 92 37 chr2 12238027 12238482 -241018101 + MLT2B1 LTR ERVL 1 480 -40 491 85 51 40 chr2 12238510 12238687 -241017896 + (TA)n Simple_repeat Simple_repeat 2 180 0 258 122 52 26 chr2 12238699 12238814 -241017769 + (TA)n Simple_repeat Simple_repeat 2 119 0 268 163 0 0 chr2 12238814 12238863 -241017720 + MLT2B1 LTR ERVL 464 512 -8 360 273 37 12 chr2 12238884 12239045 -241017538 - L1MC4 LINE L1 -937 7105 6941 671 299 85 16 chr2 12239689 12240243 -241016340 - L1MC4 LINE L1 -977 6831 6277 1333 187 93 22 chr2 12240389 12240657 -241015926 + AluJb SINE Alu 3 289 -23 215 226 151 54 chr2 12240965 12241058 -241015525 + MIR SINE MIR 96 197 -65 402 270 68 75 chr2 12243053 12243346 -241013237 - MLT1I LTR MaLR -22 387 97 1269 227 14 50 chr2 12243358 12243719 -241012864 + MLT2C1 LTR ERVL 50 397 0 24 32 0 0 chr2 12243886 12243917 -241012666 + AT_rich Low_complexity Low_complexity 1 31 0 252 288 0 25 chr2 12243976 12244056 -241012527 - L1ME3A LINE L1 -73 6097 6020 183 271 186 25 chr2 12244337 12244455 -241012128 - MIR SINE MIR -30 232 96 192 125 0 0 chr2 12244888 12244920 -241011663 + (TC)n Simple_repeat Simple_repeat 1 32 0 189 196 0 0 chr2 12244919 12244965 -241011618 + (CA)n Simple_repeat Simple_repeat 1 46 0 * 348 246 15 41 chr2 12245039 12245234 -241011349 - L1MC5 LINE L1 -271 7690 7501 564 267 0 0 chr2 12245248 12245379 -241011204 - MER3 DNA MER1_type -78 131 1 2000 104 0 0 chr2 12245449 12245728 -241010855 + L1PA8 LINE L1 5887 6165 -7 1777 255 35 50 chr2 12245825 12246565 -241010018 - L1MC4 LINE L1 -544 7498 6770 182 119 34 34 chr2 12247079 12247138 -241009445 + (TA)n Simple_repeat Simple_repeat 1 59 0 312 108 50 42 chr2 12247153 12247273 -241009310 + (TA)n Simple_repeat Simple_repeat 1 121 0 2089 62 0 0 chr2 12247331 12247604 -241008979 + AluY SINE Alu 39 311 0 352 316 64 32 chr2 12247885 12248072 -241008511 - HsTC2 DNA Tc2 -1007 891 699 308 328 138 11 chr2 12248098 12248287 -241008296 - L1ME1 LINE L1 -5 6161 5949 259 229 0 0 chr2 12248301 12248362 -241008221 - L1ME1 LINE L1 -272 5894 5834 2760 83 11 8 chr2 12248646 12249020 -241007563 + THE1C LTR MaLR 1 375 0 314 241 9 36 chr2 12249078 12249190 -241007393 + L1ME4a LINE L1 5741 5849 -272 368 266 84 0 chr2 12249211 12249365 -241007218 + L1ME4a LINE L1 5944 6110 -11 3865 44 0 0 chr2 12249818 12250297 -241006286 + L1P LINE L1 4742 5220 -926 31 0 0 0 chr2 12250726 12250757 -241005826 + AT_rich Low_complexity Low_complexity 1 31 0 4004 238 11 31 chr2 12251133 12252384 -241004199 - L1 LINE L1 -2979 3167 1937 1074 275 121 20 chr2 12252982 12253480 -241003103 - MLT1H LTR MaLR 0 549 2 2345 51 7 0 chr2 12253594 12253888 -241002695 + L1PA6 LINE L1 5847 6142 -12 294 146 18 0 chr2 12253927 12253982 -241002601 + MSTA LTR MaLR 373 428 0 1230 102 20 11 chr2 12254324 12254533 -241002050 + MLT2A2 LTR ERVL 293 453 0 1226 248 58 31 chr2 12254535 12254912 -241001671 - L1ME LINE L1 -3362 2718 2322 1734 167 27 46 chr2 12254912 12255284 -241001299 - MLT1A1 LTR MaLR 0 365 1 1226 248 58 31 chr2 12255284 12255419 -241001164 - L1ME LINE L1 -3758 2322 2192 657 153 0 0 chr2 12255421 12255519 -241001064 - Tigger3(Golem) DNA MER2_type -2 3027 2930 * 2919 158 55 8 chr2 12255510 12256021 -241000562 - Tigger3b DNA MER2_type -696 535 1 1855 274 77 80 chr2 12256030 12257217 -240999366 - L1ME LINE L1 -4052 2209 970 231 36 0 0 chr2 12257217 12257245 -240999338 + (TC)n Simple_repeat Simple_repeat 2 29 0 1855 274 77 80 chr2 12257245 12258208 -240998375 - L1ME LINE L1 -5291 970 6 292 348 100 24 chr2 12258334 12258713 -240997870 - L2 LINE L2 -641 2673 2266 212 167 0 0 chr2 12259893 12259929 -240996654 + (TATG)n Simple_repeat Simple_repeat 2 37 0 558 281 30 90 chr2 12259934 12260201 -240996382 - MIR SINE MIR -10 252 2 24 0 0 0 chr2 12260380 12260404 -240996179 + AT_rich Low_complexity Low_complexity 1 24 0 594 299 48 24 chr2 12260604 12261082 -240995501 + MLT1H1 LTR MaLR 1 587 -8 494 187 29 14 chr2 12261160 12261299 -240995284 - MER69 DNA AcHobo -9 2517 2377 1346 225 126 6 chr2 12261558 12261892 -240994691 + MLT1A2 LTR MaLR 1 374 0 351 276 11 0 chr2 12261969 12262056 -240994527 + GA-rich Low_complexity Low_complexity 3 90 0 1421 216 35 37 chr2 12262290 12262665 -240993918 - MLT1A2 LTR MaLR 0 374 1 225 159 0 0 chr2 12263256 12263300 -240993283 + GA-rich Low_complexity Low_complexity 1 44 0 1309 241 108 50 chr2 12263306 12264092 -240992491 - L1MEc LINE L1 -3961 3161 2330 941 75 37 8 chr2 12264092 12264226 -240992357 + MSTB1 LTR MaLR 295 432 0 481 313 69 41 chr2 12264229 12264549 -240992034 - L1MEc LINE L1 -5335 1088 760 955 257 89 60 chr2 12264721 12265191 -240991392 - L1MEc LINE L1 -5923 500 17 387 141 0 0 chr2 12265251 12265315 -240991268 + (GGAA)n Simple_repeat Simple_repeat 3 66 0 245 245 80 88 chr2 12265369 12265588 -240990995 - MIR SINE MIR -2 260 77 233 313 46 61 chr2 12265664 12265795 -240990788 - MIR SINE MIR -58 150 22 22 56 0 0 chr2 12266023 12266059 -240990524 + AT_rich Low_complexity Low_complexity 1 36 0 242 243 43 29 chr2 12266628 12266698 -240989885 + MIR SINE MIR 60 130 -78 195 42 0 0 chr2 12266963 12266987 -240989596 + (TTA)n Simple_repeat Simple_repeat 1 24 0 513 274 59 41 chr2 12268243 12268462 -240988121 - MIR SINE MIR -27 235 13 1270 194 43 25 chr2 12269372 12269696 -240986887 - L1ME LINE L1 -368 5796 5467 2030 134 64 19 chr2 12269799 12270158 -240986425 + THE1C LTR MaLR 1 375 0 9768 121 31 38 chr2 12270158 12271749 -240984834 + THE1C-int LTR MaLR 1 1580 0 2111 129 64 14 chr2 12271751 12272108 -240984475 + THE1C LTR MaLR 1 375 0 480 291 92 5 chr2 12272185 12272381 -240984202 + MIR SINE MIR 37 249 -13 243 308 0 22 chr2 12272933 12273024 -240983559 + CT-rich Low_complexity Low_complexity 2 90 0 240 35 0 0 chr2 12273030 12273059 -240983524 + (CA)n Simple_repeat Simple_repeat 2 30 0 252 0 0 0 chr2 12273360 12273388 -240983195 + (GA)n Simple_repeat Simple_repeat 1 28 0 293 231 71 108 chr2 12273409 12273557 -240983026 + MIR SINE MIR 31 170 -92 207 0 0 0 chr2 12273557 12273580 -240983003 + (TATG)n Simple_repeat Simple_repeat 2 24 0 293 231 71 108 chr2 12273580 12273643 -240982940 + MIR SINE MIR 170 234 -28 1372 185 59 72 chr2 12273675 12274064 -240982519 + MLT1B LTR MaLR 3 386 -4 1449 127 5 0 chr2 12274337 12274556 -240982027 - MSTA LTR MaLR -10 418 199 1988 157 65 35 chr2 12274556 12275071 -240981512 - MLT2A2 LTR ERVL 0 554 3 1093 128 96 5 chr2 12275072 12275259 -240981324 - MSTA LTR MaLR -224 204 1 196 311 76 30 chr2 12275901 12276033 -240980550 + MIR SINE MIR 119 256 -6 231 217 35 35 chr2 12276132 12276197 -240980386 + MIR SINE MIR 86 143 -65 22 80 0 0 chr2 12276967 12277017 -240979566 + AT_rich Low_complexity Low_complexity 1 50 0 334 323 60 23 chr2 12277175 12277392 -240979191 + MLT1H LTR MaLR 84 308 -241 1699 204 64 3 chr2 12277542 12277886 -240978697 + MLT1A1 LTR MaLR 1 365 0 2481 84 3 3 chr2 12278661 12278994 -240977589 - L1PA8A LINE L1 -4 6127 5795 36883 41 24 2 chr2 12279312 12284609 -240971974 - L1PA3 LINE L1 -226 5929 513 2933 20 9 0 chr2 12284709 12285109 -240971474 + L1PA2 LINE L1 5808 6210 0 854 90 0 0 chr2 12285132 12285254 -240971329 + L1PA7 LINE L1 5814 5935 -219 2404 80 0 3 chr2 12285291 12285590 -240970993 - AluY SINE Alu -13 298 1 438 314 128 19 chr2 12285611 12285989 -240970594 - L1M4 LINE L1 -2153 3993 3577 504 72 0 0 chr2 12286354 12286423 -240970160 + (TC)n Simple_repeat Simple_repeat 1 69 0 344 369 118 27 chr2 12286887 12287535 -240969048 - L1MEd LINE L1 -744 1746 948 27 0 0 0 chr2 12288685 12288712 -240967871 + AT_rich Low_complexity Low_complexity 1 27 0 1371 233 76 35 chr2 12289401 12289941 -240966642 + HsTC2a DNA Tc2 145 706 -38 181 257 27 54 chr2 12290008 12290082 -240966501 - L2 LINE L2 -4 3268 3197 21 0 0 0 chr2 12290817 12290838 -240965745 + AT_rich Low_complexity Low_complexity 1 21 0 348 24 0 0 chr2 12291086 12291127 -240965456 + (CA)n Simple_repeat Simple_repeat 2 42 0 3288 54 14 0 chr2 12291259 12291704 -240964879 - L1P LINE L1 -5691 455 5 1235 56 0 0 chr2 12291704 12291866 -240964717 - L1PA7 LINE L1 -324 5830 5669 1483 104 0 9 chr2 12291866 12292082 -240964501 + L1PA7 LINE L1 5932 6151 -3 985 181 84 13 chr2 12292185 12292488 -240964095 + MER33 DNA MER1_type 1 318 -6 347 335 101 18 chr2 12292497 12292775 -240963808 + L1MC/D LINE L1 4133 4433 -1713 28 79 0 0 chr2 12292847 12292910 -240963673 + AT_rich Low_complexity Low_complexity 1 63 0 22 35 0 0 chr2 12293299 12293328 -240963255 + AT_rich Low_complexity Low_complexity 1 29 0 338 318 22 45 chr2 12293334 12293824 -240962759 + L1MC/D LINE L1 5037 5514 -650 257 326 0 101 chr2 12293843 12293981 -240962602 - MER5B DNA MER1_type -49 129 6 509 336 79 40 chr2 12294221 12294732 -240961851 + L1 LINE L1 3838 4379 -1767 2147 116 7 10 chr2 12294732 12295033 -240961550 - AluSx SINE Alu -12 300 1 509 336 79 40 chr2 12295033 12295143 -240961440 + L1 LINE L1 4379 4483 -1663 274 235 70 20 chr2 12296437 12296538 -240960045 + MIR SINE MIR 95 200 -58 806 292 132 37 chr2 12296898 12297353 -240959230 - L3 LINE CR1 -1 1576 1079 23 33 0 0 chr2 12298855 12298885 -240957698 + AT_rich Low_complexity Low_complexity 1 30 0 769 307 40 33 chr2 12299792 12300121 -240956462 - MLT1J2 LTR MaLR -118 332 2 56 16 0 0 chr2 12302603 12302666 -240953917 + AT_rich Low_complexity Low_complexity 1 63 0 377 317 8 16 chr2 12302714 12302837 -240953746 - MIR SINE MIR -66 142 21 476 204 186 66 chr2 12302905 12303072 -240953511 - MER5A DNA MER1_type -1 188 2 242 317 30 10 chr2 12304461 12304562 -240952021 - MIR SINE MIR -102 160 58 2362 108 0 0 chr2 12304968 12305274 -240951309 + AluSx SINE Alu 1 306 -6 186 400 50 0 chr2 12305571 12305691 -240950892 - MIR SINE MIR -90 172 47 252 0 0 0 chr2 12307072 12307100 -240949483 + (CA)n Simple_repeat Simple_repeat 1 28 0 295 323 173 27 chr2 12307182 12307442 -240949141 - L2 LINE L2 -42 3230 2933 433 147 0 13 chr2 12308270 12308345 -240948238 + L1M2 LINE L1 5691 5764 -548 21 36 0 0 chr2 12308498 12308526 -240948057 + AT_rich Low_complexity Low_complexity 1 28 0 320 339 95 23 chr2 12308930 12309151 -240947432 + MIR SINE MIR 5 241 -21 352 284 39 0 chr2 12310891 12310993 -240945590 + MIR SINE MIR 47 152 -110 334 141 125 0 chr2 12312269 12312333 -240944250 + LTR33A LTR ERVL 448 519 -4 323 229 8 38 chr2 12312455 12312586 -240943997 + (TA)n Simple_repeat Simple_repeat 1 127 0 292 302 117 45 chr2 12312632 12312854 -240943729 - L2 LINE L2 -452 2862 2625 2456 258 66 6 chr2 12313394 12314087 -240942496 + MER69 DNA AcHobo 1 735 -1791 1032 241 114 5 chr2 12314099 12314476 -240942107 + MER69 DNA AcHobo 1840 2257 -269 239 254 63 0 chr2 12314702 12314765 -240941818 - MIR SINE MIR 0 262 196 275 308 25 42 chr2 12314979 12315099 -240941484 + MIR SINE MIR 8 125 -137 271 368 85 46 chr2 12315404 12315733 -240940850 + L2 LINE L2 2832 3173 -99 2621 40 0 0 chr2 12315733 12316036 -240940547 - AluY SINE Alu -8 303 1 8722 107 11 1 chr2 12316290 12317558 -240939025 - HSMAR1 DNA Mariner -1 1286 6 792 257 103 24 chr2 12317706 12317959 -240938624 - MLT1B LTR MaLR -15 375 103 679 246 7 0 chr2 12317963 12318105 -240938478 + L1PB4 LINE L1 6013 6155 -1 563 136 117 29 chr2 12318112 12318215 -240938368 - MLT1B LTR MaLR -278 112 1 364 331 147 11 chr2 12319677 12319861 -240936722 + MIR SINE MIR 23 231 -31 353 356 47 5 chr2 12320188 12320379 -240936204 + MIR SINE MIR 32 230 -32 224 314 164 21 chr2 12320697 12320837 -240935746 + MIR SINE MIR 29 188 -74 4167 101 15 2 chr2 12321277 12321824 -240934759 - MER41A LTR ERV1 0 554 1 248 348 130 5 chr2 12321883 12322090 -240934493 + MLT1G1 LTR MaLR 1 233 -362 226 231 0 154 chr2 12322134 12322212 -240934371 + MLT1G1 LTR MaLR 202 267 -288 262 239 0 65 chr2 12322411 12322503 -240934080 + MLT1G LTR MaLR 468 588 -2 578 325 40 16 chr2 12322510 12322952 -240933631 + MLT1G-int LTR MaLR 6 575 -796 1577 216 7 69 chr2 12323533 12323913 -240932670 - L1P LINE L1 -715 5416 5071 2147 137 3 0 chr2 12323913 12324220 -240932363 - AluSx SINE Alu -4 308 1 1577 216 7 69 chr2 12324220 12324341 -240932242 - L1P LINE L1 -1060 5071 4944 757 214 46 31 chr2 12324522 12324718 -240931865 - L1 LINE L1 -1218 4928 4730 4526 177 39 32 chr2 12324734 12325650 -240930933 + L1MA10 LINE L1 5411 6333 -1 273 258 75 11 chr2 12326090 12326183 -240930400 + MLT1F LTR MaLR 52 150 -445 514 204 170 78 chr2 12326298 12326504 -240930079 + MLT1F LTR MaLR 331 555 0 180 0 0 0 chr2 12327312 12327332 -240929251 + (A)n Simple_repeat Simple_repeat 1 20 0 182 114 0 29 chr2 12327857 12327892 -240928691 + (GGAGAA)n Simple_repeat Simple_repeat 4 37 0 24 32 0 0 chr2 12328039 12328070 -240928513 + AT_rich Low_complexity Low_complexity 1 31 0 360 330 71 20 chr2 12328482 12328679 -240927904 + MIR SINE MIR 56 262 0 707 263 73 48 chr2 12328713 12329112 -240927471 + HAL1b LINE L1 374 782 -566 250 247 23 6 chr2 12330496 12330670 -240925913 + (TA)n Simple_repeat Simple_repeat 1 177 0 268 208 56 0 chr2 12331150 12331222 -240925361 + L1ME LINE L1 512 587 -5483 2774 202 32 10 chr2 12331410 12332004 -240924579 + L1MB7 LINE L1 5573 6179 -5 1994 97 7 29 chr2 12332224 12332502 -240924081 + AluY SINE Alu 27 298 -13 234 277 33 87 chr2 12332765 12332949 -240923634 + L1ME3A LINE L1 5067 5240 -906 421 261 81 6 chr2 12333217 12333378 -240923205 - L1M4 LINE L1 -2830 3316 3144 1772 89 0 8 chr2 12333378 12333613 -240922970 - AluY SINE Alu 0 311 79 2620 108 68 21 chr2 12333613 12334040 -240922543 + LTR7 LTR ERV1 1 447 -3 20497 92 6 29 chr2 12334043 12337109 -240919474 + HERVH LTR ERV1 1 2995 -4718 893 136 27 0 chr2 12337088 12337235 -240919348 + HERVH LTR ERV1 3140 3290 -4423 * 3460 112 4 2 chr2 12337225 12337726 -240918857 + HERVH LTR ERV1 3492 3993 -3720 3814 135 71 22 chr2 12337728 12338359 -240918224 + HERVH LTR ERV1 4488 5149 -2564 2420 111 54 25 chr2 12338360 12338941 -240917642 + HERVH LTR ERV1 5600 7713 0 2726 104 60 21 chr2 12338941 12339372 -240917211 + LTR7 LTR ERV1 1 448 -2 607 146 0 0 chr2 12339374 12339456 -240917127 - AluY SINE Alu -227 83 2 1372 272 62 85 chr2 12339534 12339827 -240916756 + L1ME3A LINE L1 5290 5588 -582 2154 106 0 0 chr2 12339827 12340131 -240916452 + AluSc SINE Alu 1 304 0 1372 272 62 85 chr2 12340131 12340732 -240915851 + L1ME3A LINE L1 5588 6160 -10 204 323 0 0 chr2 12342355 12342417 -240914166 + MIR SINE MIR 83 144 -64 217 192 20 25 chr2 12343519 12343724 -240912859 + (TA)n Simple_repeat Simple_repeat 1 203 0 999 233 147 8 chr2 12343727 12344038 -240912545 - MLT2B1 LTR ERVL -21 533 137 180 398 19 19 chr2 12344452 12344560 -240912023 + MIR SINE MIR 36 143 -65 24 0 0 0 chr2 12344612 12344636 -240911947 + AT_rich Low_complexity Low_complexity 1 24 0 7146 67 10 1 chr2 12344792 12345801 -240910782 + L1PA7 LINE L1 5025 6150 -4 322 332 133 5 chr2 12346039 12346227 -240910356 - MIR SINE MIR -10 252 42 2099 201 15 20 chr2 12346479 12346877 -240909706 - MSTD LTR MaLR 0 396 1 350 251 17 153 chr2 12347176 12347404 -240909179 + L1MDb LINE L1 1160 1152 -5152 6616 92 20 1 chr2 12347404 12348708 -240907875 + L1PA10 LINE L1 4834 6151 -17 350 251 17 153 chr2 12348708 12348959 -240907624 + L1MDb LINE L1 1151 1435 -4869 206 379 61 0 chr2 12350599 12350665 -240905918 + L2 LINE L2 3111 3180 -92 202 250 7 157 chr2 12351304 12351444 -240905139 + L2 LINE L2 3138 3256 -16 1052 291 14 36 chr2 12351785 12352143 -240904440 + MLT1J2 LTR MaLR 25 374 -76 183 362 53 0 chr2 12352729 12352823 -240903760 + L3 LINE CR1 1425 1523 -54 404 314 59 18 chr2 12352958 12353178 -240903405 + MIR SINE MIR 2 230 -32 928 211 6 0 chr2 12353398 12353554 -240903029 + FAM SINE Alu 1 157 -18 340 323 51 0 chr2 12353757 12353915 -240902668 - MIR SINE MIR -4 258 93 252 288 0 72 chr2 12354675 12354786 -240901797 + MIR SINE MIR 37 139 -69 191 325 125 42 chr2 12355378 12355498 -240901085 + MIR3 SINE MIR 1 130 -78 326 154 0 0 chr2 12355678 12355730 -240900853 - L1MB8 LINE L1 -10 6168 6117 2007 134 0 25 chr2 12357193 12357513 -240899070 + AluSx SINE Alu 1 312 0 439 209 12 12 chr2 12358356 12358442 -240898141 - MER81 DNA DNA 0 114 29 652 319 135 25 chr2 12358452 12358941 -240897642 + L2 LINE L2 2211 2753 -561 276 149 0 0 chr2 12359360 12359407 -240897176 + (TC)n Simple_repeat Simple_repeat 2 48 0 500 309 99 28 chr2 12359547 12359939 -240896644 - L1MC4 LINE L1 0 8042 7506 3029 81 39 3 chr2 12360192 12360600 -240895983 + MLT2A1 LTR ERVL 1 492 -23 319 154 39 10 chr2 12360600 12360704 -240895879 + (TA)n Simple_repeat Simple_repeat 1 107 0 300 189 35 6 chr2 12360708 12360790 -240895793 + MLT2A1 LTR ERVL 402 444 0 470 281 14 22 chr2 12360989 12361128 -240895455 + L2 LINE L2 3168 3305 -8 294 29 0 0 chr2 12362267 12362302 -240894281 + (TC)n Simple_repeat Simple_repeat 2 36 0 21 0 0 0 chr2 12362421 12362442 -240894141 + AT_rich Low_complexity Low_complexity 1 21 0 201 184 36 25 chr2 12362474 12362764 -240893819 + (TA)n Simple_repeat Simple_repeat 1 293 0 210 205 68 8 chr2 12362810 12362927 -240893656 + (TA)n Simple_repeat Simple_repeat 2 125 0 187 154 19 19 chr2 12362974 12363026 -240893557 + (TA)n Simple_repeat Simple_repeat 2 53 0 1264 228 115 32 chr2 12363079 12363426 -240893157 - MLT2B1 LTR ERVL -137 383 8 180 375 0 0 chr2 12363891 12363955 -240892628 + MIR SINE MIR 78 141 -67 3632 8 0 0 chr2 12364625 12365010 -240891573 - L1PA2 LINE L1 0 6155 5771 4570 20 0 0 chr2 12365010 12365650 -240890933 + L1PA2 LINE L1 5134 5773 -382 1571 209 38 79 chr2 12366070 12366577 -240890006 - L1MA10 LINE L1 -3 6331 5846 457 227 35 93 chr2 12366889 12367015 -240889568 + MER96B DNA MER1_type? 1 116 -301 1804 132 62 14 chr2 12367015 12367303 -240889280 + AluSx SINE Alu 1 302 -10 457 227 35 93 chr2 12367303 12367348 -240889235 + MER96B DNA MER1_type? 116 162 -255 194 330 68 48 chr2 12367813 12367916 -240888667 - L2 LINE L2 -14 3258 3154 206 323 86 21 chr2 12368954 12369047 -240887536 - L2 LINE L2 -32 3240 3142 261 119 0 0 chr2 12370186 12370228 -240886355 + (TTCC)n Simple_repeat Simple_repeat 4 45 0 1925 128 18 4 chr2 12370237 12370518 -240886065 + AluSx SINE Alu 27 311 -1 259 294 87 22 chr2 12370651 12370743 -240885840 - L2 LINE L2 -188 3084 2987 280 298 170 18 chr2 12371401 12371572 -240885011 - MIR SINE MIR 0 262 66 245 334 114 64 chr2 12372230 12372589 -240883994 + L2 LINE L2 2887 3263 -9 288 0 0 0 chr2 12372954 12372986 -240883597 + (TG)n Simple_repeat Simple_repeat 2 33 0 2070 210 56 94 chr2 12373388 12374099 -240882484 + Charlie1a DNA MER1_type 1 684 -771 615 134 4 195 chr2 12374119 12374316 -240882267 - Charlie1 DNA MER1_type -375 2386 2238 1953 112 0 100 chr2 12374316 12374647 -240881936 - AluSg SINE Alu -12 298 1 615 134 4 195 chr2 12374647 12374680 -240881903 - Charlie1 DNA MER1_type -523 2238 2200 1350 202 30 16 chr2 12374680 12375052 -240881531 + Charlie1 DNA MER1_type 2385 2761 0 484 312 50 45 chr2 12375382 12375584 -240880999 + MIR3 SINE MIR 1 203 -5 376 325 234 0 chr2 12375689 12375886 -240880697 + MIR SINE MIR 10 252 -10 504 333 73 0 chr2 12375903 12376053 -240880530 + L2 LINE L2 3112 3272 0 217 273 76 0 chr2 12376672 12376738 -240879845 - MIR SINE MIR -87 175 105 470 282 20 20 chr2 12377095 12377244 -240879339 - L2 LINE L2 0 3313 3165 21 0 0 0 chr2 12377574 12377595 -240878988 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 12377774 12377798 -240878785 + AT_rich Low_complexity Low_complexity 1 24 0 400 326 61 11 chr2 12377933 12378114 -240878469 - L1ME4a LINE L1 -195 5926 5737 22 56 0 0 chr2 12378160 12378196 -240878387 + AT_rich Low_complexity Low_complexity 1 36 0 261 0 0 0 chr2 12378295 12378324 -240878259 + (A)n Simple_repeat Simple_repeat 1 29 0 365 298 132 29 chr2 12378736 12378941 -240877642 - MIR SINE MIR 0 262 37 475 330 30 51 chr2 12379260 12379496 -240877087 + MIR SINE MIR 5 235 -27 32 57 0 0 chr2 12380495 12380548 -240876035 + AT_rich Low_complexity Low_complexity 1 53 0 868 244 113 41 chr2 12380925 12381042 -240875541 + L1ME1 LINE L1 2201 2308 -3838 2145 123 27 0 chr2 12381042 12381342 -240875241 + AluSg SINE Alu 1 308 -2 868 244 113 41 chr2 12381342 12381665 -240874918 + L1ME1 LINE L1 2308 2692 -3454 1493 116 0 22 chr2 12381665 12381890 -240874693 - AluSg/x SINE Alu -8 302 83 868 244 113 41 chr2 12381890 12382006 -240874577 + L1ME1 LINE L1 2692 2798 -3348 1711 173 15 64 chr2 12382006 12382411 -240874172 - MLT1B LTR MaLR 0 390 6 2815 275 76 52 chr2 12382422 12382630 -240873953 + L1ME1 LINE L1 2801 3002 -3144 2817 13 0 0 chr2 12382630 12382941 -240873642 + AluY SINE Alu 1 311 0 2815 275 76 52 chr2 12382941 12384930 -240871653 + L1ME1 LINE L1 3002 5081 -1065 2770 102 0 0 chr2 12384930 12385294 -240871289 + THE1B LTR MaLR 1 364 0 2815 275 76 52 chr2 12385294 12385525 -240871058 + L1ME1 LINE L1 5081 5305 -841 1940 148 3 25 chr2 12385527 12385845 -240870738 + AluJb SINE Alu 1 311 -1 1075 261 106 9 chr2 12385901 12386049 -240870534 + L1ME1 LINE L1 5323 5455 -904 261 0 0 0 chr2 12386049 12386078 -240870505 + (CA)n Simple_repeat Simple_repeat 2 30 0 1075 261 106 9 chr2 12386078 12386354 -240870229 + L1ME1 LINE L1 5455 5788 -571 1118 236 60 3 chr2 12386354 12386655 -240869928 - MLT1D LTR MaLR -187 318 1 999 241 14 81 chr2 12386656 12386814 -240869769 + L1ME1 LINE L1 5782 5904 -262 2128 131 10 0 chr2 12386814 12387112 -240869471 - AluSp SINE Alu -12 301 1 999 241 14 81 chr2 12387112 12387310 -240869273 + L1ME1 LINE L1 5904 6114 -52 205 171 0 53 chr2 12387404 12387480 -240869103 + (TCTA)n Simple_repeat Simple_repeat 4 75 0 741 128 13 20 chr2 12387502 12387651 -240868932 + (TCTA)n Simple_repeat Simple_repeat 3 150 0 234 358 57 0 chr2 12388322 12388445 -240868138 - MIR SINE MIR -21 241 112 191 313 72 0 chr2 12388459 12388542 -240868041 + MIR SINE MIR 99 187 -75 2358 130 22 0 chr2 12388571 12388926 -240867657 - THE1B LTR MaLR 0 364 2 1534 179 58 0 chr2 12389517 12389808 -240866775 + AluJo SINE Alu 1 308 -4 448 196 11 0 chr2 12389952 12390044 -240866539 - FLAM_C SINE Alu -3 140 48 693 73 0 0 chr2 12390098 12390194 -240866389 + (GGAA)n Simple_repeat Simple_repeat 2 97 0 1663 160 0 60 chr2 12390204 12390522 -240866061 + AluJo SINE Alu 14 312 0 190 54 27 27 chr2 12390522 12390559 -240866024 + (GGAA)n Simple_repeat Simple_repeat 3 39 0 573 199 18 6 chr2 12390583 12390749 -240865834 + GA-rich Low_complexity Low_complexity 2 169 0 2337 50 0 3 chr2 12390781 12391099 -240865484 + AluY SINE Alu 1 317 0 384 152 0 0 chr2 12391443 12391509 -240865074 + (TG)n Simple_repeat Simple_repeat 2 67 0 1298 213 21 15 chr2 12391564 12391893 -240864690 + L1MD3 LINE L1 7665 7995 0 251 272 87 10 chr2 12392045 12392148 -240864435 - L1ME LINE L1 -485 6134 6024 291 298 29 39 chr2 12392659 12392763 -240863820 + MIR SINE MIR 40 142 -120 1504 284 154 34 chr2 12393109 12393979 -240862604 - L1M4c LINE L1 -2735 3909 2847 1588 156 107 26 chr2 12393979 12394155 -240862428 + THE1C LTR MaLR 1 161 -214 531 56 0 0 chr2 12394155 12394226 -240862357 + (TC)n Simple_repeat Simple_repeat 1 71 0 1588 156 107 26 chr2 12394226 12394396 -240862187 + THE1C LTR MaLR 161 375 0 1504 284 154 34 chr2 12394396 12394748 -240861835 - L1M4c LINE L1 -3797 2847 2539 326 274 75 0 chr2 12394766 12394872 -240861711 - L1M4c LINE L1 -4163 2483 2370 2988 240 73 28 chr2 12394890 12395015 -240861568 - L1M4c LINE L1 -4432 2393 2275 2434 65 0 16 chr2 12395015 12395325 -240861258 + AluY SINE Alu 1 305 -6 2988 240 73 28 chr2 12395325 12396682 -240859901 - L1M4c LINE L1 -4550 2275 684 1097 246 41 52 chr2 12396683 12397045 -240859538 - L1M4c LINE L1 -5937 605 248 1267 230 4 25 chr2 12397053 12397331 -240859252 - AluJb SINE Alu -7 305 34 4940 206 29 39 chr2 12397338 12398376 -240858207 + L1MC3 LINE L1 5716 6763 -1022 2267 93 0 10 chr2 12398376 12398678 -240857905 - AluSc SINE Alu -10 299 1 4940 206 29 39 chr2 12398678 12398806 -240857777 + L1MC3 LINE L1 6763 6891 -894 351 0 0 0 chr2 12398806 12398845 -240857738 + (CA)n Simple_repeat Simple_repeat 2 40 0 4940 206 29 39 chr2 12398845 12399044 -240857539 + L1MC3 LINE L1 6891 7068 -717 238 315 140 0 chr2 12400427 12400570 -240856013 - MIR SINE MIR -6 256 94 639 7 107 0 chr2 12401283 12401423 -240855160 + (TA)n Simple_repeat Simple_repeat 2 156 0 196 100 20 20 chr2 12401425 12401475 -240855108 + (TATAA)n Simple_repeat Simple_repeat 5 54 0 330 227 0 52 chr2 12401475 12401572 -240855011 + L1MC4 LINE L1 6612 6703 -1339 273 348 61 35 chr2 12401763 12401993 -240854590 - MIR SINE MIR -6 256 21 2284 77 3 29 chr2 12402752 12403063 -240853520 + AluY SINE Alu 9 311 0 1236 211 44 73 chr2 12403126 12403539 -240853044 - MLT2D LTR ERVL -13 401 1 210 71 0 0 chr2 12404184 12404212 -240852371 + (A)n Simple_repeat Simple_repeat 1 28 0 387 0 0 0 chr2 12404537 12404580 -240852003 + (TGGA)n Simple_repeat Simple_repeat 1 43 0 270 0 0 0 chr2 12404855 12404885 -240851698 + (A)n Simple_repeat Simple_repeat 1 30 0 43 35 0 0 chr2 12406157 12406214 -240850369 + AT_rich Low_complexity Low_complexity 1 57 0 21 0 0 0 chr2 12406268 12406289 -240850294 + AT_rich Low_complexity Low_complexity 1 21 0 211 244 0 39 chr2 12406301 12406379 -240850204 + (CATATA)n Simple_repeat Simple_repeat 5 79 0 244 374 30 0 chr2 12406483 12406582 -240850001 - L2 LINE L2 0 3272 3171 23 0 0 0 chr2 12407840 12407863 -240848720 + AT_rich Low_complexity Low_complexity 1 23 0 321 304 0 43 chr2 12407899 12408014 -240848569 - L2 LINE L2 -32 3281 3172 206 308 13 26 chr2 12408238 12408316 -240848267 - MER91A DNA MER1_type -111 85 9 302 376 38 11 chr2 12408397 12408583 -240848000 - L2 LINE L2 -281 3032 2842 182 325 38 0 chr2 12408786 12408866 -240847717 - MIR3 SINE MIR 0 208 126 218 284 0 26 chr2 12408874 12408990 -240847593 + (TA)n Simple_repeat Simple_repeat 2 114 0 3737 92 28 9 chr2 12409284 12409857 -240846726 - L1PB1 LINE L1 -158 5993 5410 910 140 0 0 chr2 12409859 12410009 -240846574 + L1PB1 LINE L1 6002 6151 0 1217 153 101 37 chr2 12410021 12410320 -240846263 - MLT1A1 LTR MaLR -39 357 9 2361 71 0 14 chr2 12410807 12411104 -240845479 - AluY SINE Alu -18 293 1 417 316 130 32 chr2 12411704 12412173 -240844410 + L1M3b LINE L1 629 1143 -5138 25 0 0 0 chr2 12412294 12412319 -240844264 + AT_rich Low_complexity Low_complexity 1 25 0 26 50 0 0 chr2 12412648 12412688 -240843895 + AT_rich Low_complexity Low_complexity 1 40 0 2074 112 14 17 chr2 12414078 12414372 -240842211 - AluSx SINE Alu -19 293 1 186 298 191 0 chr2 12414397 12414481 -240842102 - L2 LINE L2 -36 3236 3137 274 267 92 112 chr2 12414773 12414979 -240841604 - MLT1I LTR MaLR -1 408 207 1190 209 7 109 chr2 12415242 12415653 -240840930 - MLT1A2 LTR MaLR 0 374 6 350 372 39 13 chr2 12418034 12418265 -240838318 + MIR SINE MIR 9 245 -17 301 333 35 26 chr2 12418909 12419023 -240837560 - MIR SINE MIR -147 115 1 212 409 0 11 chr2 12419216 12419309 -240837274 + MER5A DNA MER1_type 74 165 -24 336 290 0 11 chr2 12419531 12419624 -240836959 - L1MC4 LINE L1 -1337 6705 6614 216 0 0 0 chr2 12419626 12419650 -240836933 + (GA)n Simple_repeat Simple_repeat 2 25 0 253 294 80 74 chr2 12419776 12420102 -240836481 - L1MC4 LINE L1 -1906 5902 5575 327 49 0 0 chr2 12420304 12420345 -240836238 + (CA)n Simple_repeat Simple_repeat 2 42 0 260 331 22 29 chr2 12420346 12420485 -240836098 + (CATG)n Simple_repeat Simple_repeat 2 139 0 23 33 0 0 chr2 12420516 12420546 -240836037 + AT_rich Low_complexity Low_complexity 1 30 0 870 305 29 34 chr2 12420727 12421078 -240835505 + L1MC4a LINE L1 5592 5940 -1868 221 202 22 22 chr2 12421116 12421205 -240835378 + (TA)n Simple_repeat Simple_repeat 2 90 0 233 302 0 0 chr2 12422054 12422117 -240834466 + T-rich Low_complexity Low_complexity 3 65 0 309 233 33 67 chr2 12423520 12423640 -240832943 + L1ME4a LINE L1 5937 6052 -69 255 301 15 30 chr2 12424592 12424725 -240831858 + L1ME4a LINE L1 5310 5440 -681 566 282 173 27 chr2 12424841 12425327 -240831256 + L1ME4a LINE L1 5546 6102 -19 1698 174 10 13 chr2 12425328 12425638 -240830945 + AluJo SINE Alu 3 311 -1 386 284 43 26 chr2 12425830 12425946 -240830637 - MIR3 SINE MIR -86 122 5 2328 63 6 44 chr2 12426131 12426447 -240830136 + AluY SINE Alu 1 304 -7 519 236 10 28 chr2 12426908 12427197 -240829386 + CT-rich Low_complexity Low_complexity 1 283 0 222 323 32 43 chr2 12427279 12427372 -240829211 + MIR SINE MIR 21 112 -150 192 277 0 62 chr2 12427376 12427441 -240829142 - L2 LINE L2 0 3272 3212 1068 252 91 31 chr2 12427704 12428057 -240828526 + HsTC2 DNA Tc2 1 374 -1524 588 210 93 25 chr2 12428054 12428216 -240828367 + HsTC2 DNA Tc2 1277 1625 -273 * 236 323 177 0 chr2 12428266 12428396 -240828187 + MIR SINE MIR 37 189 -73 366 335 61 12 chr2 12429381 12429545 -240827038 + MIR SINE MIR 35 206 -56 211 329 51 29 chr2 12429693 12429830 -240826753 + MIR3 SINE MIR 3 142 -66 486 0 0 0 chr2 12431524 12431578 -240825005 + (CA)n Simple_repeat Simple_repeat 2 55 0 26 0 0 0 chr2 12431761 12431787 -240824796 + AT_rich Low_complexity Low_complexity 1 26 0 204 340 38 28 chr2 12432221 12432327 -240824256 + MIR SINE MIR 66 172 -90 3096 151 2 11 chr2 12432913 12433384 -240823199 + MLT1C LTR MaLR 1 467 0 4628 171 53 10 chr2 12433583 12434375 -240822208 - LTR1B LTR ERV1 0 826 1 551 273 40 42 chr2 12434640 12434915 -240821668 + L2 LINE L2 2956 3291 -22 3552 39 0 2 chr2 12434926 12435332 -240821251 + L1PA4 LINE L1 5746 6150 -5 2399 90 3 0 chr2 12435707 12436017 -240820566 + AluSp SINE Alu 1 311 -2 988 212 0 10 chr2 12436043 12436236 -240820347 - MER3 DNA MER1_type 0 209 19 341 254 60 103 chr2 12436836 12437021 -240819562 - MLT1J1 LTR MaLR -28 418 242 230 253 177 0 chr2 12437068 12437147 -240819436 - MLT1J1 LTR MaLR -285 161 69 1489 204 20 67 chr2 12437807 12438165 -240818418 - MER58B DNA MER1_type 0 341 1 342 278 61 37 chr2 12438748 12438953 -240817630 - HAL1b LINE L1 0 6121 5922 1831 117 3 60 chr2 12438953 12439253 -240817330 - AluSq SINE Alu -19 294 12 342 278 61 37 chr2 12439253 12439391 -240817192 - HAL1b LINE L1 -199 5922 1242 332 301 87 0 chr2 12439429 12439532 -240817051 - L2 LINE L2 -5 3267 3156 265 349 54 8 chr2 12439535 12439664 -240816919 - L2 LINE L2 -25 3247 3113 186 348 58 0 chr2 12440412 12440481 -240816102 - L3 LINE CR1 -677 900 828 269 214 0 0 chr2 12441569 12441625 -240814958 - MLT2B2 LTR ERVL 0 520 465 271 263 0 42 chr2 12441633 12441728 -240814855 + L1MC4 LINE L1 6614 6704 -1338 1681 192 20 28 chr2 12441746 12442179 -240814404 - MLT2B2 LTR ERVL -40 480 8 579 279 62 0 chr2 12442229 12442390 -240814193 - MIR SINE MIR -15 247 77 652 221 99 9 chr2 12442390 12442668 -240813915 + LTR50 LTR ERVL 1 344 -451 888 224 100 17 chr2 12442699 12442989 -240813594 + LTR50 LTR ERVL 482 795 0 929 203 0 0 chr2 12443131 12443289 -240813294 - AluJb SINE Alu -23 289 132 705 276 24 0 chr2 12443600 12443770 -240812813 - MIR3 SINE MIR -4 204 31 730 212 6 17 chr2 12444006 12444185 -240812398 - MER96B DNA MER1_type? -238 179 3 225 333 27 13 chr2 12444406 12444481 -240812102 + MIR SINE MIR 13 88 -174 207 237 175 21 chr2 12444592 12444689 -240811894 + MIR SINE MIR 110 221 -41 1709 176 17 10 chr2 12445104 12445406 -240811177 + AluJo SINE Alu 1 304 -8 1554 276 78 26 chr2 12445490 12446050 -240810533 + MLT1E LTR MaLR 1 591 -2 791 106 29 0 chr2 12446054 12446158 -240810425 + U6 snRNA snRNA 1 107 0 3370 80 17 4 chr2 12446158 12446643 -240809940 + L1PA8A LINE L1 5227 5716 -415 756 113 0 0 chr2 12446750 12446865 -240809718 - L1PA7 LINE L1 -108 6046 5932 * 1324 56 0 0 chr2 12446859 12447021 -240809562 + L1PA7 LINE L1 5669 5830 -324 27814 39 38 3 chr2 12447021 12450444 -240806139 + L1P LINE L1 5 3549 -2597 1965 262 74 48 chr2 12450564 12451270 -240805313 + HERV16 LTR ERVL 733 1456 -3540 1635 303 43 28 chr2 12451450 12452120 -240804463 + HERV16 LTR ERVL 2220 2899 -2097 610 291 106 0 chr2 12452126 12452325 -240804258 - MLT1D LTR MaLR 0 505 286 814 274 21 60 chr2 12452339 12452770 -240803813 + HERV16 LTR ERVL 3011 3468 -2296 1225 318 84 13 chr2 12453900 12454592 -240801991 + HAL1 LINE L1 1523 2263 -244 1569 228 21 12 chr2 12456756 12457089 -240799494 + MER58B DNA MER1_type 5 340 -1 622 239 61 0 chr2 12457119 12457299 -240799284 - L1MC4a LINE L1 -1498 6310 6120 1506 105 5 0 chr2 12457300 12457519 -240799064 - MER6 DNA MER2_type -27 838 619 1353 230 129 24 chr2 12457608 12458134 -240798449 - MLT1E1 LTR MaLR 0 654 1 2004 268 37 16 chr2 12458320 12458828 -240797755 + LTR40a LTR ERVL 1 519 0 2777 191 25 36 chr2 12459003 12459553 -240797030 + MER44D DNA MER2_type 7 605 0 234 0 0 0 chr2 12460264 12460290 -240796293 + (TG)n Simple_repeat Simple_repeat 1 26 0 211 366 32 0 chr2 12460507 12460600 -240795983 + MIR3 SINE MIR 105 200 -8 2659 120 8 5 chr2 12462497 12462871 -240793712 - THE1C LTR MaLR 0 375 1 562 299 51 0 chr2 12463149 12463286 -240793297 - MER45A DNA AcHobo -1 177 34 216 294 35 24 chr2 12464217 12464302 -240792281 - MIR SINE MIR -97 165 80 319 294 31 69 chr2 12466023 12466183 -240790400 - MIR SINE MIR -96 166 13 515 239 28 57 chr2 12466629 12466805 -240789778 - MER5B DNA MER1_type -2 176 6 203 62 62 0 chr2 12468675 12468707 -240787876 - MIR SINE MIR -105 157 124 2171 125 0 0 chr2 12468864 12469159 -240787424 + AluSg SINE Alu 1 295 -15 2143 170 10 47 chr2 12469422 12469827 -240786756 + MLT1B LTR MaLR 1 390 0 243 214 205 68 chr2 12470139 12470228 -240786355 + MIR SINE MIR 124 234 -28 8435 142 15 10 chr2 12470228 12471521 -240785062 + HSMAR2 DNA Mariner 3 1301 -1 243 214 205 68 chr2 12471521 12471548 -240785035 + MIR SINE MIR 234 256 -6 1953 177 106 32 chr2 12471621 12471813 -240784770 - MLT1C LTR MaLR 0 467 291 2486 176 54 77 chr2 12471813 12472439 -240784144 + LTR9 LTR ERV1 1 612 0 1953 177 106 32 chr2 12472439 12472681 -240783902 - MLT1C LTR MaLR -176 291 1 650 230 20 20 chr2 12472855 12473007 -240783576 + MER5B DNA MER1_type 27 178 0 185 159 23 0 chr2 12473565 12473609 -240782974 + CT-rich Low_complexity Low_complexity 1 45 0 413 293 47 60 chr2 12473853 12474003 -240782580 - MIR3 SINE MIR -41 167 20 366 214 88 159 chr2 12474370 12474552 -240782031 - MER5B DNA MER1_type 0 178 21 218 339 123 12 chr2 12474635 12474886 -240781697 - L2 LINE L2 -792 2522 2244 262 375 69 7 chr2 12476078 12476222 -240780361 + MIR SINE MIR 38 190 -72 22 56 0 0 chr2 12477444 12477480 -240779103 + AT_rich Low_complexity Low_complexity 1 36 0 217 321 47 38 chr2 12477586 12477692 -240778891 + MIR SINE MIR 25 131 -77 310 305 83 49 chr2 12477796 12478121 -240778462 + MARNA DNA Mariner 43 378 -208 186 394 51 15 chr2 12478222 12478359 -240778224 - MIR SINE MIR -4 258 117 4440 235 91 102 chr2 12479000 12479928 -240776655 + L1ME1 LINE L1 52 989 -5407 2205 65 4 4 chr2 12479928 12480207 -240776376 + AluY SINE Alu 1 279 -32 4440 235 91 102 chr2 12480207 12480247 -240776336 + L1ME1 LINE L1 989 1028 -5368 704 103 43 9 chr2 12480247 12480363 -240776220 + AluSg/x SINE Alu 182 301 -8 4440 235 91 102 chr2 12480363 12481776 -240774807 + L1ME1 LINE L1 1028 2520 -3876 2924 241 67 22 chr2 12481774 12483436 -240773147 + L1ME1 LINE L1 4492 6215 -20 * 274 305 58 94 chr2 12484364 12484672 -240771911 - L2 LINE L2 -9 3263 2967 216 97 0 0 chr2 12484674 12484705 -240771878 + (A)n Simple_repeat Simple_repeat 1 31 0 2698 202 6 14 chr2 12484961 12485451 -240771132 - MER66B LTR ERV1 0 486 1 198 354 40 0 chr2 12486235 12486334 -240770249 + MIR SINE MIR 148 250 -12 24 0 0 0 chr2 12486585 12486609 -240769974 + AT_rich Low_complexity Low_complexity 1 24 0 2373 124 33 33 chr2 12486915 12487279 -240769304 - THE1B LTR MaLR 0 364 1 255 321 0 12 chr2 12487786 12487870 -240768713 - MIR SINE MIR -133 129 47 21 0 0 0 chr2 12487938 12487959 -240768624 + AT_rich Low_complexity Low_complexity 1 21 0 629 266 77 65 chr2 12488290 12488684 -240767899 + MLT1H LTR MaLR 16 421 -128 268 328 22 39 chr2 12489088 12489222 -240767361 + MIR SINE MIR 22 152 -64 499 271 28 44 chr2 12489711 12489892 -240766691 + HsTC2 DNA Tc2 1 178 -1720 355 203 10 173 chr2 12489894 12490096 -240766487 + HsTC2 DNA Tc2 1732 1900 0 382 304 102 42 chr2 12490608 12490989 -240765594 + LTR33A LTR ERVL 53 456 -67 297 328 33 16 chr2 12491372 12491494 -240765089 - MIR SINE MIR -76 186 63 2194 94 12 44 chr2 12491565 12491885 -240764698 + AluSx SINE Alu 1 310 -2 289 314 58 0 chr2 12492040 12492161 -240764422 + L2 LINE L2 3186 3313 0 260 287 8 74 chr2 12492250 12492372 -240764211 - L2 LINE L2 0 3272 3159 299 82 55 0 chr2 12492848 12492921 -240763662 + (TA)n Simple_repeat Simple_repeat 1 77 0 51 0 0 0 chr2 12492921 12492972 -240763611 + AT_rich Low_complexity Low_complexity 1 51 0 360 293 0 0 chr2 12493250 12493325 -240763258 - MIR SINE MIR -64 144 70 390 269 123 38 chr2 12494313 12494525 -240762058 + MIR SINE MIR 20 249 -13 1075 124 0 31 chr2 12494796 12494957 -240761626 - MER4E LTR ERV1 0 766 611 * 2176 104 16 7 chr2 12494952 12495261 -240761322 - MER4E LTR ERV1 -466 313 2 214 183 169 42 chr2 12495284 12495355 -240761228 - MIR SINE MIR -136 126 47 360 0 0 0 chr2 12496285 12496325 -240760258 + (TG)n Simple_repeat Simple_repeat 2 41 0 351 257 26 10 chr2 12496374 12496493 -240760090 + MIR SINE MIR 28 149 -59 940 208 33 9 chr2 12496499 12496711 -240759872 + LTR8A LTR ERV1 1 217 -510 3632 62 0 7 chr2 12496711 12497162 -240759421 + LTR7 LTR ERV1 1 448 -2 20488 88 59 50 chr2 12497164 12500426 -240756157 + HERVH LTR ERV1 1 3290 -4423 3308 124 8 6 chr2 12500416 12500917 -240755666 + HERVH LTR ERV1 3492 3993 -3720 * 4242 153 3 1 chr2 12500919 12501580 -240755003 + HERVH LTR ERV1 4488 5149 -2564 1389 134 18 5 chr2 12501581 12501798 -240754785 + HERVH LTR ERV1 5600 5819 -1894 * 2696 58 45 13 chr2 12501796 12502176 -240754407 + HERVH LTR ERV1 7322 7713 0 3567 59 0 22 chr2 12502176 12502634 -240753949 + LTR7 LTR ERV1 1 448 -2 1800 178 100 57 chr2 12502644 12503134 -240753449 + LTR8A LTR ERV1 214 724 -3 4464 101 0 0 chr2 12503489 12504043 -240752540 - MER41A LTR ERV1 0 554 1 2278 95 10 0 chr2 12505590 12505884 -240750699 + AluSc SINE Alu 1 297 -12 207 277 114 72 chr2 12507717 12507883 -240748700 - MIR SINE MIR -71 191 19 1768 127 0 16 chr2 12507990 12508242 -240748341 - AluSx SINE Alu -16 296 49 312 337 95 12 chr2 12508314 12508483 -240748100 + MIR3 SINE MIR 22 204 -4 2039 114 0 36 chr2 12508898 12509206 -240747377 - AluSx SINE Alu -13 299 3 240 250 88 38 chr2 12509647 12509727 -240746856 - L2 LINE L2 -51 3262 3179 546 313 109 37 chr2 12509822 12510116 -240746467 - MLT1I LTR MaLR -13 396 82 294 251 64 22 chr2 12510890 12511006 -240745577 + MIR SINE MIR 29 153 -55 242 175 0 0 chr2 12511050 12511090 -240745493 - MLT2D LTR ERVL -8 389 350 207 294 0 0 chr2 12511090 12511141 -240745442 + (TATG)n Simple_repeat Simple_repeat 3 53 0 1632 198 24 45 chr2 12511158 12511532 -240745051 - MLT2D LTR ERVL -48 366 1 215 208 42 0 chr2 12511532 12511580 -240745003 + GA-rich Low_complexity Low_complexity 1 50 0 1825 143 0 0 chr2 12512549 12512815 -240743768 + AluSx SINE Alu 1 266 -46 2465 124 31 6 chr2 12514226 12514580 -240742003 - THE1B LTR MaLR 0 364 2 29 47 0 0 chr2 12516042 12516085 -240740498 + AT_rich Low_complexity Low_complexity 1 43 0 206 185 46 46 chr2 12516230 12516295 -240740288 + MIR3 SINE MIR 99 163 -45 2423 119 73 14 chr2 12516601 12516945 -240739638 - THE1B LTR MaLR 0 364 1 261 230 92 35 chr2 12517323 12517410 -240739173 - L2 LINE L2 -27 3245 3154 261 380 72 6 chr2 12517890 12518056 -240738527 + MIR SINE MIR 57 233 -29 350 321 80 0 chr2 12518884 12519021 -240737562 + L2 LINE L2 3109 3256 -16 198 260 20 20 chr2 12519043 12519093 -240737490 - L2 LINE L2 -14 3258 3209 534 317 28 36 chr2 12519602 12519965 -240736618 - LTR16B LTR ERVL 0 464 105 339 262 6 81 chr2 12520637 12520809 -240735774 + L2 LINE L2 3155 3313 0 304 281 70 31 chr2 12520849 12520977 -240735606 - MIR3 SINE MIR -61 147 15 299 302 0 0 chr2 12521098 12521184 -240735399 - MIR SINE MIR -70 192 107 383 245 65 19 chr2 12521234 12521389 -240735194 + L2 LINE L2 2942 3103 -210 2288 86 7 13 chr2 12521587 12521890 -240734693 - AluSg SINE Alu 0 310 10 402 333 82 0 chr2 12522031 12522214 -240734369 - L3b LINE CR1 -98 1485 1288 263 331 76 16 chr2 12522324 12522491 -240734092 + MIR SINE MIR 3 182 -74 1447 181 60 11 chr2 12522557 12522662 -240733921 + AluJo SINE Alu 11 109 -203 294 29 0 0 chr2 12522662 12522697 -240733886 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 1447 181 60 11 chr2 12522697 12522873 -240733710 + AluJo SINE Alu 109 306 -6 272 188 153 24 chr2 12523492 12523577 -240733006 - MIR SINE MIR -67 141 46 * 527 274 90 30 chr2 12523560 12523761 -240732822 + MIR SINE MIR 50 262 0 288 278 135 32 chr2 12523769 12523895 -240732688 - MIR3 SINE MIR -62 146 8 1979 159 3 0 chr2 12523929 12524238 -240732345 + AluJb SINE Alu 3 312 0 197 337 70 12 chr2 12524265 12524351 -240732232 - MIR3 SINE MIR -15 193 103 243 310 10 40 chr2 12524372 12524472 -240732111 + MER5A DNA MER1_type 47 143 -46 24 67 0 0 chr2 12524739 12524784 -240731799 + AT_rich Low_complexity Low_complexity 1 45 0 272 240 52 21 chr2 12524786 12524882 -240731701 - Charlie7 DNA MER1_type -2511 101 3 2244 124 3 0 chr2 12525366 12525673 -240730910 + AluSx SINE Alu 1 308 -4 296 269 19 46 chr2 12526026 12526134 -240730449 + MIR SINE MIR 85 189 -73 477 339 75 54 chr2 12526392 12526681 -240729902 - L2 LINE L2 -5 3267 2966 2048 128 3 0 chr2 12526681 12526978 -240729605 + AluSg SINE Alu 1 298 -12 477 339 75 54 chr2 12526978 12527077 -240729506 - L2 LINE L2 -306 2966 2871 301 272 25 0 chr2 12527104 12527185 -240729398 - L2 LINE L2 -546 2768 2686 289 262 166 28 chr2 12527225 12527370 -240729213 - MER5B DNA MER1_type 0 178 14 659 234 28 41 chr2 12527574 12527792 -240728791 + MLT1C LTR MaLR 253 467 0 204 125 0 0 chr2 12528348 12528380 -240728203 + (GA)n Simple_repeat Simple_repeat 2 33 0 270 306 0 0 chr2 12528380 12528465 -240728118 + (TG)n Simple_repeat Simple_repeat 2 86 0 528 365 25 8 chr2 12528635 12528879 -240727704 + MIR SINE MIR 1 248 -14 313 289 105 59 chr2 12529690 12529842 -240726741 - MIR SINE MIR -70 192 34 458 338 40 22 chr2 12530056 12530281 -240726302 - L3 LINE CR1 -372 1205 977 207 0 0 0 chr2 12530434 12530457 -240726126 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1678 145 8 4 chr2 12530460 12530715 -240725868 - AluSx SINE Alu -31 281 26 303 245 53 16 chr2 12531212 12531329 -240725254 + MIR SINE MIR 3 129 -79 1120 236 190 44 chr2 12531584 12532020 -240724563 + MLT1D LTR MaLR 1 500 -5 305 311 10 0 chr2 12532054 12532138 -240724445 - MIR SINE MIR -78 130 42 233 382 29 15 chr2 12532532 12532668 -240723915 + MIR3 SINE MIR 45 182 -26 236 333 13 0 chr2 12533360 12533435 -240723148 - MIR SINE MIR -68 140 65 24 32 0 0 chr2 12533552 12533583 -240723000 + AT_rich Low_complexity Low_complexity 1 31 0 229 336 148 0 chr2 12534215 12534337 -240722246 - MIR3 SINE MIR -5 203 64 2051 139 37 6 chr2 12536412 12536764 -240719819 - L1MD1 LINE L1 0 6242 5880 252 269 19 10 chr2 12536765 12536869 -240719714 - L1M4 LINE L1 -1778 4368 4264 996 199 26 26 chr2 12536916 12537147 -240719436 - L1M4 LINE L1 -1888 4258 4028 215 352 46 19 chr2 12537488 12537596 -240718987 - MIR SINE MIR -71 191 81 195 289 0 0 chr2 12537694 12537746 -240718837 - L2 LINE L2 -6 3266 3215 221 340 130 0 chr2 12537790 12537890 -240718693 + L2 LINE L2 3158 3270 -2 345 325 94 23 chr2 12538031 12538251 -240718332 + MIR SINE MIR 19 248 -14 1693 171 7 21 chr2 12538261 12538548 -240718035 + AluJo SINE Alu 1 283 -29 21 0 0 0 chr2 12539834 12539855 -240716728 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 12539866 12539887 -240716696 + AT_rich Low_complexity Low_complexity 1 21 0 183 293 36 71 chr2 12540063 12540203 -240716380 - L2 LINE L2 0 3272 3138 360 219 61 0 chr2 12540902 12540984 -240715599 - MER94 DNA DNA -47 87 1 242 146 36 18 chr2 12541510 12541565 -240715018 - MER5A DNA MER1_type -61 128 73 297 220 65 113 chr2 12542042 12542228 -240714355 - MIR SINE MIR -16 246 70 417 95 0 0 chr2 12542513 12542576 -240714007 + (TG)n Simple_repeat Simple_repeat 1 63 0 414 0 0 0 chr2 12542586 12542632 -240713951 + (TA)n Simple_repeat Simple_repeat 1 46 0 227 374 17 84 chr2 12542641 12542820 -240713763 + L2 LINE L2 3102 3268 -4 180 0 0 0 chr2 12542830 12542850 -240713733 + (GA)n Simple_repeat Simple_repeat 1 20 0 244 288 225 9 chr2 12544387 12544498 -240712085 + MIR SINE MIR 47 181 -81 607 279 42 42 chr2 12545132 12545369 -240711214 + MIR SINE MIR 13 249 -13 814 251 82 32 chr2 12546621 12546900 -240709683 + L2 LINE L2 3020 3312 -1 459 194 0 0 chr2 12546904 12547007 -240709576 + GA-rich Low_complexity Low_complexity 2 104 0 564 275 25 50 chr2 12547292 12547492 -240709091 - MIR SINE MIR -16 246 52 231 340 81 18 chr2 12547499 12547679 -240708904 + MIR SINE MIR 20 211 -51 279 317 132 92 chr2 12548028 12548353 -240708230 + L2 LINE L2 2920 3257 -15 213 191 24 0 chr2 12549508 12549550 -240707033 - L2 LINE L2 -14 3258 3216 316 296 42 136 chr2 12549642 12549950 -240706633 + L2 LINE L2 2957 3235 -37 239 318 42 48 chr2 12549965 12550154 -240706429 - MLT1J2 LTR MaLR 0 450 263 2442 113 48 22 chr2 12550499 12550854 -240705729 - THE1B LTR MaLR 0 364 1 2311 90 20 0 chr2 12551608 12551907 -240704676 - AluSc SINE Alu -3 306 2 516 300 171 19 chr2 12552000 12552310 -240704273 - L2 LINE L2 -364 2950 2594 215 253 0 11 chr2 12552859 12552950 -240703633 + GA-rich Low_complexity Low_complexity 4 93 0 250 242 67 107 chr2 12553114 12553292 -240703291 + LTR33A LTR ERVL 25 195 -328 466 259 36 7 chr2 12553377 12553516 -240703067 + LTR33A LTR ERVL 365 507 -16 255 300 48 88 chr2 12554558 12554785 -240701798 + L2 LINE L2 2967 3184 -88 191 35 0 35 chr2 12555054 12555083 -240701500 + (TCC)n Simple_repeat Simple_repeat 3 30 0 302 299 57 38 chr2 12555339 12555496 -240701087 + MIR SINE MIR 47 206 -56 2148 182 26 19 chr2 12555556 12555974 -240700609 + MLT1C LTR MaLR 21 441 -26 337 247 34 45 chr2 12556245 12556334 -240700249 - MER5B DNA MER1_type -73 105 18 201 93 56 56 chr2 12556768 12556822 -240699761 + A-rich Low_complexity Low_complexity 4 57 0 275 295 151 76 chr2 12556957 12557327 -240699256 + L2 LINE L2 2875 3272 0 2262 89 89 0 chr2 12558059 12558383 -240698200 - MER4C LTR ERV1 -5 460 108 537 298 57 24 chr2 12559426 12559674 -240696909 + MIR SINE MIR 2 257 -5 4385 162 47 10 chr2 12560213 12561640 -240694943 + L1MA6 LINE L1 4640 6120 -180 461 226 220 21 chr2 12561697 12561883 -240694700 + MIR SINE MIR 24 246 -16 1000 237 86 4 chr2 12562324 12562581 -240694002 - MLT1C LTR MaLR 0 467 190 1114 158 11 0 chr2 12562581 12562765 -240693818 - MLT1-int LTR MaLR -1185 186 1 1712 154 30 129 chr2 12562765 12562805 -240693778 - MLT2C1 LTR ERVL 0 397 355 351 0 0 0 chr2 12562805 12562844 -240693739 + (TG)n Simple_repeat Simple_repeat 1 39 0 1712 154 30 129 chr2 12562844 12563004 -240693579 - MLT2C1 LTR ERVL -42 355 181 2527 78 0 3 chr2 12563004 12563311 -240693272 - AluY SINE Alu -5 306 1 1712 154 30 129 chr2 12563311 12563550 -240693033 - MLT2C1 LTR ERVL -216 181 1 196 314 71 0 chr2 12563631 12563701 -240692882 + MIR3 SINE MIR 125 199 -9 349 311 122 6 chr2 12564389 12564569 -240692014 + MIR SINE MIR 7 207 -55 419 243 103 76 chr2 12564666 12564942 -240691641 + MLT1H LTR MaLR 1 314 -235 237 295 51 0 chr2 12565002 12565080 -240691503 + MLT1H LTR MaLR 454 535 -14 288 0 0 0 chr2 12566591 12566623 -240689960 + (TG)n Simple_repeat Simple_repeat 2 33 0 364 228 80 68 chr2 12566817 12566979 -240689604 - MER114 LTR ERV -27 621 458 680 250 60 5 chr2 12566992 12567208 -240689375 - MER114 LTR ERV -420 228 1 375 333 100 9 chr2 12568859 12569069 -240687514 - MIR SINE MIR -32 230 2 202 261 0 0 chr2 12569603 12569649 -240686934 - L2 LINE L2 -5 3267 3222 283 145 0 53 chr2 12569756 12569832 -240686751 + (GGAGAA)n Simple_repeat Simple_repeat 5 76 0 218 179 18 0 chr2 12570104 12570160 -240686423 + (TGAA)n Simple_repeat Simple_repeat 1 57 0 382 263 104 45 chr2 12570434 12570655 -240685928 - MLT1L LTR MaLR -206 409 73 263 316 188 0 chr2 12571100 12571233 -240685350 - MIR SINE MIR -19 243 86 189 350 58 29 chr2 12571714 12571817 -240684766 - L2 LINE L2 -8 3264 3159 729 273 95 71 chr2 12571912 12572418 -240684165 + LTR33 LTR ERVL 1 518 -3 296 257 155 20 chr2 12572419 12572567 -240684016 - MIR3 SINE MIR -15 193 26 180 259 111 0 chr2 12573556 12573610 -240682973 + MIR SINE MIR 88 147 -61 761 306 52 33 chr2 12574189 12574689 -240681894 - MLT1H1 LTR MaLR -13 536 1 281 254 0 0 chr2 12574837 12574892 -240681691 + L2 LINE L2 3236 3290 -23 281 318 23 0 chr2 12575284 12575372 -240681211 - L2 LINE L2 0 3272 3183 1518 207 83 115 chr2 12575632 12576066 -240680517 + MLT1E LTR MaLR 148 593 0 217 292 124 68 chr2 12576277 12576438 -240680145 + L2 LINE L2 2866 3035 -237 261 128 0 0 chr2 12576482 12576529 -240680054 + (TA)n Simple_repeat Simple_repeat 2 48 0 338 260 70 10 chr2 12576529 12576629 -240679954 - L1MC4 LINE L1 -1323 6719 6614 * 398 194 0 82 chr2 12576554 12576652 -240679931 + L1MC4 LINE L1 6614 6703 -1339 345 198 27 90 chr2 12576659 12576752 -240679831 + L1MC4 LINE L1 6613 6699 -1343 471 113 0 0 chr2 12576752 12576823 -240679760 + (CA)n Simple_repeat Simple_repeat 2 72 0 345 198 27 90 chr2 12576823 12576840 -240679743 + L1MC4 LINE L1 6699 6716 -1326 1454 198 52 38 chr2 12577058 12577426 -240679157 + MLT1B LTR MaLR 1 373 -17 1333 133 90 0 chr2 12577515 12577726 -240678857 + MER30 DNA MER1_type 1 230 0 210 316 61 44 chr2 12577781 12577895 -240678688 + MIR SINE MIR 97 212 -50 880 220 24 24 chr2 12577965 12578215 -240678368 - MER96B DNA MER1_type? -167 250 1 235 220 34 0 chr2 12578769 12578811 -240677772 + GA-rich Low_complexity Low_complexity 4 50 -14 1972 201 49 82 chr2 12578811 12579383 -240677200 - MLT2B3 LTR ERVL -1 553 1 235 220 34 0 chr2 12579383 12579399 -240677184 + GA-rich Low_complexity Low_complexity 50 64 0 454 308 63 0 chr2 12579475 12579634 -240676949 - MIR SINE MIR -49 213 45 250 310 70 51 chr2 12580380 12580538 -240676045 + MIR SINE MIR 76 236 -26 231 305 78 35 chr2 12580742 12580883 -240675700 - MIR SINE MIR -95 167 21 206 216 0 0 chr2 12581314 12581351 -240675232 + (CAAG)n Simple_repeat Simple_repeat 2 38 0 534 172 0 0 chr2 12581844 12581943 -240674640 + (CA)n Simple_repeat Simple_repeat 2 100 0 312 231 130 19 chr2 12581954 12582062 -240674521 + MIR SINE MIR 69 188 -74 2027 163 28 0 chr2 12583024 12583379 -240673204 + MLT1A1 LTR MaLR 1 365 0 210 260 135 31 chr2 12583381 12583477 -240673106 + MER91C DNA MER1_type 31 136 -4 224 306 16 0 chr2 12583659 12583721 -240672862 + L2 LINE L2 3209 3271 -1 2212 96 0 0 chr2 12584073 12584365 -240672218 - AluSc SINE Alu -17 292 1 274 398 128 0 chr2 12584365 12584576 -240672007 - MIR SINE MIR -18 244 7 317 253 121 0 chr2 12585159 12585250 -240671333 + L2 LINE L2 3200 3301 -12 408 313 53 65 chr2 12585270 12585516 -240671067 + L2 LINE L2 3022 3264 -8 280 296 25 75 chr2 12585521 12585688 -240670895 - MIR SINE MIR -60 148 32 257 167 49 108 chr2 12586026 12586128 -240670455 - MER94 DNA DNA -25 109 14 23 0 0 0 chr2 12587025 12587048 -240669535 + GC_rich Low_complexity Low_complexity 1 23 0 252 143 13 78 chr2 12587203 12587280 -240669303 + G-rich Low_complexity Low_complexity 2 73 0 306 346 31 8 chr2 12592397 12592524 -240664059 - MIR3 SINE MIR -49 159 30 335 271 122 0 chr2 12593023 12593130 -240663453 + MIR3 SINE MIR 40 159 -49 470 292 49 7 chr2 12593358 12593502 -240663081 - MIR SINE MIR -50 212 63 328 268 85 37 chr2 12594501 12594665 -240661918 - L2 LINE L2 -208 3064 2893 181 344 42 21 chr2 12596286 12596382 -240660201 - MIR3 SINE MIR -34 174 77 383 313 112 1 chr2 12597483 12597627 -240658956 + MIR SINE MIR 46 197 -65 504 259 127 25 chr2 12598441 12598638 -240657945 + MIR SINE MIR 34 250 -12 215 320 27 13 chr2 12600262 12600337 -240656246 + MIR SINE MIR 187 262 0 575 254 46 8 chr2 12600395 12600525 -240656058 - L2 LINE L2 -2 3311 3177 471 269 174 6 chr2 12600589 12600756 -240655827 - MIR SINE MIR -62 200 6 181 0 33 33 chr2 12600972 12601002 -240655581 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 342 250 90 10 chr2 12601372 12601472 -240655111 - L2 LINE L2 -2 3311 3204 231 349 132 9 chr2 12601938 12602044 -240654539 - MIR3 SINE MIR -52 156 38 536 253 8 20 chr2 12603491 12603645 -240652938 + MIR SINE MIR 22 150 -58 251 294 88 67 chr2 12603804 12604042 -240652541 + MIR SINE MIR 20 262 0 232 297 33 22 chr2 12604096 12604187 -240652396 - MIR3 SINE MIR -6 202 111 207 296 20 10 chr2 12604733 12604831 -240651752 - L2 LINE L2 -297 3016 2918 232 360 9 26 chr2 12605025 12605139 -240651444 + L2 LINE L2 3154 3265 -7 196 273 47 47 chr2 12605358 12605486 -240651097 - MIR SINE MIR -61 147 20 216 321 56 37 chr2 12605876 12606038 -240650545 + MIR SINE MIR 69 233 -29 240 328 0 0 chr2 12607032 12607090 -240649493 - L2 LINE L2 -23 3290 3233 359 299 19 116 chr2 12608076 12608131 -240648452 - MIR3 SINE MIR -2 206 147 551 124 21 10 chr2 12608131 12608228 -240648355 + L1MB3 LINE L1 6076 6173 -10 359 299 19 116 chr2 12608228 12608379 -240648204 - MIR3 SINE MIR -61 147 20 1875 124 53 0 chr2 12609637 12609919 -240646664 - AluSg SINE Alu -13 297 1 428 283 72 33 chr2 12610035 12610215 -240646368 + MIR SINE MIR 4 190 -72 207 247 148 62 chr2 12610313 12610394 -240646189 + MIR SINE MIR 46 133 -129 400 245 35 84 chr2 12610438 12610581 -240646002 + L2 LINE L2 3134 3269 -3 318 294 96 40 chr2 12613299 12613476 -240643107 - MIR SINE MIR -69 193 7 184 289 65 99 chr2 12613814 12614046 -240642537 - L2 LINE L2 -125 3147 2924 241 229 21 0 chr2 12614246 12614294 -240642289 + L2 LINE L2 3212 3260 -12 1809 202 19 22 chr2 12615145 12615511 -240641072 + MLT1A1 LTR MaLR 1 365 0 183 333 51 0 chr2 12615526 12615604 -240640979 - MIR3 SINE MIR -45 163 82 323 341 66 0 chr2 12616125 12616276 -240640307 - MIR SINE MIR -68 140 34 1546 210 16 25 chr2 12616582 12616948 -240639635 - MLT1A1 LTR MaLR -2 363 1 476 264 16 24 chr2 12616965 12617090 -240639493 + MIR SINE MIR 19 142 -66 313 118 39 0 chr2 12617639 12617690 -240638893 + MLT1C LTR MaLR 1 53 -414 852 129 14 7 chr2 12617694 12617833 -240638750 - MLT1A1 LTR MaLR -225 140 1 248 329 13 13 chr2 12617850 12617926 -240638657 + MIR SINE MIR 19 94 -114 1500 218 62 14 chr2 12617932 12618286 -240638297 + MLT1C LTR MaLR 66 436 -31 315 270 30 10 chr2 12619031 12619131 -240637452 - L1MA10 LINE L1 -7 6327 6226 * 554 271 92 5 chr2 12619124 12619281 -240637302 - L1M4 LINE L1 -1818 4397 4214 189 0 0 0 chr2 12619281 12619302 -240637281 + (TTA)n Simple_repeat Simple_repeat 2 22 0 554 271 92 5 chr2 12619302 12619362 -240637221 - L1M4 LINE L1 -2001 4214 4161 2252 233 56 26 chr2 12619367 12620298 -240636285 - L1MEc LINE L1 -3540 2675 1765 3036 301 45 27 chr2 12620404 12621586 -240634997 - ERVL LTR ERVL -2129 2867 1665 767 313 39 58 chr2 12621593 12622056 -240634527 - ERVL LTR ERVL -3520 1476 1023 1423 226 52 75 chr2 12622065 12622570 -240634013 - MLT1D LTR MaLR 0 505 13 1999 148 42 36 chr2 12622754 12623111 -240633472 + MER47A DNA MER2_type 1 359 -7 482 309 18 6 chr2 12623150 12623315 -240633268 - ERVL LTR ERVL -3720 2044 1878 342 68 0 0 chr2 12623438 12623482 -240633101 - MADE1 DNA Mariner 0 80 37 398 333 69 32 chr2 12623490 12623736 -240632847 - ERVL LTR ERVL -4327 669 415 1215 209 146 16 chr2 12623745 12624060 -240632523 + MLT1A1 LTR MaLR 10 365 0 255 277 12 24 chr2 12625655 12625738 -240630845 - MIR3 SINE MIR -27 181 100 218 232 49 37 chr2 12625800 12625882 -240630701 + L2 LINE L2 3189 3271 -1 211 355 69 28 chr2 12626920 12627078 -240629505 + MIR3 SINE MIR 3 164 -66 201 143 0 29 chr2 12627699 12627734 -240628849 + (TCCC)n Simple_repeat Simple_repeat 4 37 0 281 359 114 40 chr2 12627755 12628106 -240628477 - L2 LINE L2 -3 3269 2893 1784 160 21 30 chr2 12628893 12629230 -240627353 + MLT1A1 LTR MaLR 32 365 0 437 311 15 7 chr2 12629232 12629367 -240627216 + MIR SINE MIR 16 151 -111 531 257 66 7 chr2 12629955 12630107 -240626476 - MIR3 SINE MIR -12 196 36 306 289 11 67 chr2 12630337 12630427 -240626156 - L2 LINE L2 -42 3230 3146 517 315 65 53 chr2 12630683 12631004 -240625579 - MLT1K LTR MaLR -126 462 138 242 371 13 38 chr2 12631989 12632148 -240624435 + MIR3 SINE MIR 33 187 -21 222 279 82 40 chr2 12632788 12632964 -240623619 - MIR SINE MIR -66 142 11 303 192 0 0 chr2 12633849 12633901 -240622682 + MER53 DNA DNA 1 52 -137 284 364 8 8 chr2 12633991 12634109 -240622474 - MIR SINE MIR -125 137 20 390 195 54 81 chr2 12634231 12634380 -240622203 + MER104 DNA Tc2 1 145 -35 416 261 30 3 chr2 12635454 12635586 -240620997 - MIR SINE MIR -63 145 20 467 250 75 33 chr2 12635986 12636147 -240620436 + MIR SINE MIR 5 173 -63 182 320 111 107 chr2 12636124 12636349 -240620234 + L2 LINE L2 3023 3248 -24 * 362 288 38 11 chr2 12636687 12636829 -240619754 - MIR SINE MIR -64 144 18 328 254 73 34 chr2 12637560 12637715 -240618868 - MIR SINE MIR -42 220 59 238 285 35 36 chr2 12637736 12637845 -240618738 - MIR SINE MIR -102 106 3 201 169 15 62 chr2 12638068 12638133 -240618450 + CT-rich Low_complexity Low_complexity 3 64 0 357 287 105 0 chr2 12638553 12638696 -240617887 + MIR3 SINE MIR 24 181 -27 322 337 21 0 chr2 12639592 12639687 -240616896 + L3 LINE CR1 1467 1563 -14 233 119 24 0 chr2 12639777 12639819 -240616764 + CT-rich Low_complexity Low_complexity 2 44 0 421 199 7 40 chr2 12639892 12640043 -240616540 + GA-rich Low_complexity Low_complexity 2 147 0 267 268 14 0 chr2 12640071 12640142 -240616441 + GA-rich Low_complexity Low_complexity 3 74 0 231 313 0 50 chr2 12641685 12641765 -240614818 + MIR3 SINE MIR 15 90 -118 211 266 78 16 chr2 12641782 12641846 -240614737 - MIR SINE MIR -90 172 105 505 321 96 44 chr2 12642113 12642372 -240614211 - L2 LINE L2 -17 3296 3052 1872 121 92 0 chr2 12642372 12642644 -240613939 + AluSx SINE Alu 1 297 -15 505 321 96 44 chr2 12642644 12642984 -240613599 - L2 LINE L2 -261 3052 2643 2036 131 0 0 chr2 12642984 12643299 -240613284 + AluSx SINE Alu 1 315 0 505 321 96 44 chr2 12643299 12643383 -240613200 - L2 LINE L2 -670 2643 2565 1629 138 4 11 chr2 12643491 12643759 -240612824 + L1MA4 LINE L1 6035 6300 0 418 303 114 0 chr2 12645432 12645607 -240610976 + MIR SINE MIR 53 247 -15 368 292 41 18 chr2 12646301 12646475 -240610108 + MIR SINE MIR 2 174 -63 473 264 63 29 chr2 12647163 12647337 -240609246 + MER5A DNA MER1_type 7 186 -3 2115 146 50 19 chr2 12647796 12648160 -240608423 + THE1C LTR MaLR 1 375 0 23 33 0 0 chr2 12648416 12648446 -240608137 + AT_rich Low_complexity Low_complexity 1 30 0 415 265 118 12 chr2 12649391 12649561 -240607022 - MIR SINE MIR -56 206 19 866 281 121 25 chr2 12649580 12650028 -240606555 - MLT1H LTR MaLR -19 530 40 21 0 0 0 chr2 12650228 12650249 -240606334 + AT_rich Low_complexity Low_complexity 1 21 0 404 305 116 56 chr2 12650293 12650824 -240605759 + L2 LINE L2 2684 3271 -1 1058 97 0 0 chr2 12650851 12650995 -240605588 - L1PA4 LINE L1 -2 6153 6010 971 65 29 1 chr2 12650995 12651141 -240605442 + L1PA4 LINE L1 5923 6079 -86 203 295 42 32 chr2 12651487 12651582 -240605001 - L2 LINE L2 -2691 623 528 362 279 11 49 chr2 12651629 12651875 -240604708 + (TATATG)n Simple_repeat Simple_repeat 1 236 0 205 312 43 0 chr2 12651922 12652015 -240604568 + (TATATG)n Simple_repeat Simple_repeat 5 101 0 304 325 44 12 chr2 12652320 12652480 -240604103 + MIR3 SINE MIR 32 196 -12 236 269 138 39 chr2 12652794 12652924 -240603659 + MIR SINE MIR 50 192 -70 1689 216 74 9 chr2 12653383 12653845 -240602738 + Charlie4a DNA MER1_type 17 508 0 401 264 214 16 chr2 12654150 12654332 -240602251 - MIR SINE MIR -2 260 43 30 0 0 0 chr2 12655117 12655147 -240601436 + AT_rich Low_complexity Low_complexity 1 30 0 2372 127 33 25 chr2 12655225 12655586 -240600997 - THE1B LTR MaLR 0 364 1 11272 104 6 36 chr2 12655586 12657214 -240599369 - THE1B-int LTR MaLR 0 1580 2 2101 147 42 31 chr2 12657215 12657575 -240599008 - THE1B LTR MaLR 0 364 1 432 312 26 13 chr2 12657797 12657951 -240598632 - MIR SINE MIR -71 191 36 447 308 69 20 chr2 12658617 12658837 -240597746 + MIR SINE MIR 15 242 -20 203 329 25 0 chr2 12659095 12659174 -240597409 - L2 LINE L2 -7 3265 3185 550 320 90 46 chr2 12659746 12659839 -240596744 - HAL1b LINE L1 -631 717 630 7860 32 0 4 chr2 12659839 12660815 -240595768 - L1PA4 LINE L1 -2 6153 5176 550 320 90 46 chr2 12660815 12661155 -240595428 - HAL1b LINE L1 -718 630 265 21 36 0 0 chr2 12661708 12661736 -240594847 + AT_rich Low_complexity Low_complexity 1 28 0 634 348 104 34 chr2 12661784 12662955 -240593628 + L1M4 LINE L1 4151 5403 -743 437 113 12 88 chr2 12663034 12663114 -240593469 + MER58B DNA MER1_type 259 332 -9 7452 52 16 2 chr2 12663124 12664225 -240592358 + L1PA7 LINE L1 5036 6148 -6 2132 117 0 3 chr2 12664391 12664691 -240591892 - AluSg SINE Alu -11 299 1 22 35 0 0 chr2 12664706 12664735 -240591848 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 12664803 12664824 -240591759 + AT_rich Low_complexity Low_complexity 1 21 0 2134 117 0 13 chr2 12665213 12665512 -240591071 - AluSx SINE Alu -17 295 1 1822 139 0 24 chr2 12665991 12666286 -240590297 + AluSg SINE Alu 17 304 -6 241 313 114 15 chr2 12666504 12666635 -240589948 + L2 LINE L2 3168 3311 -2 334 290 178 0 chr2 12666736 12666905 -240589678 + MIR SINE MIR 56 254 -8 511 333 21 12 chr2 12667866 12668106 -240588477 - MIR SINE MIR -13 249 8 213 231 0 31 chr2 12669428 12669493 -240587090 + GA-rich Low_complexity Low_complexity 4 66 0 448 284 129 19 chr2 12669969 12670025 -240586558 - MER5A DNA MER1_type -14 175 127 5674 132 34 2 chr2 12670025 12670402 -240586181 + L1PA13 LINE L1 4313 4677 -1486 336 18 53 18 chr2 12670402 12670459 -240586124 + (TAAA)n Simple_repeat Simple_repeat 2 60 0 5674 132 34 2 chr2 12670459 12671441 -240585142 + L1PA13 LINE L1 4677 5723 -440 306 0 0 0 chr2 12671441 12671475 -240585108 + (CA)n Simple_repeat Simple_repeat 2 35 0 5674 132 34 2 chr2 12671475 12671927 -240584656 + L1PA13 LINE L1 5723 6159 -4 448 284 129 19 chr2 12671927 12672025 -240584558 - MER5A DNA MER1_type -62 127 4 3168 138 6 26 chr2 12672137 12672636 -240583947 + LOR1a LTR ERV1 1 489 -8 341 366 0 38 chr2 12673119 12673250 -240583333 - L2 LINE L2 -214 3058 2933 203 170 0 19 chr2 12673742 12673795 -240582788 + (TA)n Simple_repeat Simple_repeat 2 53 0 21 0 0 0 chr2 12673964 12673985 -240582598 + AT_rich Low_complexity Low_complexity 1 21 0 2244 83 24 3 chr2 12676049 12676339 -240580244 + AluY SINE Alu 1 296 -15 408 357 40 12 chr2 12676354 12676606 -240579977 + L3 LINE CR1 1301 1559 -18 180 297 66 66 chr2 12677191 12677282 -240579301 + MIR SINE MIR 57 147 -115 266 278 52 43 chr2 12677622 12677737 -240578846 + MIR3 SINE MIR 81 196 -12 219 329 26 0 chr2 12678427 12678503 -240578080 + MIR SINE MIR 63 140 -122 227 397 45 13 chr2 12679373 12679597 -240576986 + MIR SINE MIR 21 251 -11 192 179 0 0 chr2 12679607 12679646 -240576937 + (TTA)n Simple_repeat Simple_repeat 3 41 0 247 313 0 0 chr2 12680343 12680426 -240576157 + GA-rich Low_complexity Low_complexity 2 84 0 3833 217 54 10 chr2 12681539 12682430 -240574153 + MER63C DNA MER1_type 1 930 0 431 137 17 188 chr2 12682472 12682589 -240573994 - MER7A DNA MER2_type 0 337 241 2281 219 68 39 chr2 12682632 12683341 -240573242 + L1ME1 LINE L1 5176 5899 -267 6621 124 91 13 chr2 12683342 12684483 -240572100 + Tigger3b DNA MER2_type 2 1231 0 584 202 0 26 chr2 12684491 12684605 -240571978 - MER7A DNA MER2_type -237 109 1 308 200 14 0 chr2 12684605 12684675 -240571908 + L1ME2 LINE L1 5908 5978 -186 2602 67 0 0 chr2 12684675 12684987 -240571596 + AluSq SINE Alu 1 312 -1 2218 84 3 24 chr2 12685034 12685351 -240571232 - AluSp SINE Alu 0 313 6 218 308 23 75 chr2 12686091 12686224 -240570359 + MIR SINE MIR 49 174 -88 22 0 0 0 chr2 12687124 12687146 -240569437 + AT_rich Low_complexity Low_complexity 1 22 0 1792 237 29 26 chr2 12687583 12688035 -240568548 + MLT1C LTR MaLR 2 454 -13 439 171 19 0 chr2 12688736 12688841 -240567742 + CT-rich Low_complexity Low_complexity 2 108 0 473 298 33 2 chr2 12689111 12689289 -240567294 - MIR SINE MIR -65 197 16 243 0 0 0 chr2 12689868 12689895 -240566688 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 431 239 52 76 chr2 12690879 12691118 -240565465 - MIR SINE MIR 0 262 16 237 167 0 37 chr2 12691847 12691901 -240564682 + CT-rich Low_complexity Low_complexity 3 54 0 192 362 0 0 chr2 12691971 12692029 -240564554 - MIR SINE MIR -121 141 84 3354 164 43 11 chr2 12693152 12693747 -240562836 - MER6A DNA MER2_type -13 592 -11 295 256 134 43 chr2 12694282 12694446 -240562137 + MIR3 SINE MIR 3 181 -27 210 86 0 103 chr2 12695953 12696011 -240560572 + (TTTTTG)n Simple_repeat Simple_repeat 2 53 0 438 287 153 0 chr2 12696887 12697044 -240559539 - MER5A DNA MER1_type -5 184 4 239 376 30 51 chr2 12697046 12697243 -240559340 + MIR3 SINE MIR 16 208 0 2383 170 17 10 chr2 12697412 12697830 -240558753 + L1M2 LINE L1 5344 5764 -527 4014 122 89 74 chr2 12697831 12698604 -240557979 - LTR1 LTR ERV1 0 785 1 2558 43 0 7 chr2 12698675 12698980 -240557603 + AluY SINE Alu 1 303 -8 239 292 112 11 chr2 12699631 12699720 -240556863 + L2 LINE L2 3170 3267 -5 196 326 76 21 chr2 12700866 12701010 -240555573 - MIR SINE MIR -77 185 34 275 349 70 6 chr2 12701635 12701807 -240554776 + MIR SINE MIR 80 262 0 198 319 250 17 chr2 12702020 12702136 -240554447 + L2 LINE L2 3123 3265 -7 * 210 296 286 10 chr2 12702133 12702231 -240554352 + L2 LINE L2 3128 3252 -20 239 316 0 0 chr2 12702324 12702381 -240554202 + MIR SINE MIR 28 84 -124 579 306 128 35 chr2 12702554 12702959 -240553624 + L2 LINE L2 2871 3313 0 261 317 0 0 chr2 12703478 12703538 -240553045 + MIR3 SINE MIR 125 184 -24 331 306 73 48 chr2 12703989 12704195 -240552388 + MIR SINE MIR 20 230 -32 958 190 31 20 chr2 12705303 12705426 -240551157 + MER3 DNA MER1_type 9 136 -73 2038 118 10 0 chr2 12705426 12705715 -240550868 - AluSx SINE Alu -20 292 1 958 190 31 20 chr2 12705715 12705786 -240550797 + MER3 DNA MER1_type 136 205 -4 1202 273 39 56 chr2 12706052 12706607 -240549976 + MLT1G3 LTR MaLR 1 491 -61 288 0 0 0 chr2 12706607 12706639 -240549944 + (TG)n Simple_repeat Simple_repeat 1 32 0 1202 273 39 56 chr2 12706639 12706700 -240549883 + MLT1G3 LTR MaLR 491 552 0 208 305 12 12 chr2 12707072 12707154 -240549429 + MIR SINE MIR 99 180 -82 2077 100 33 10 chr2 12708420 12708721 -240547862 - AluY SINE Alu -3 308 1 2438 77 0 26 chr2 12709205 12709515 -240547068 + AluSp SINE Alu 1 302 -11 257 351 131 16 chr2 12709519 12709710 -240546873 - MIR SINE MIR -13 249 37 2261 233 66 38 chr2 12709798 12710400 -240546183 + MLT1E2 LTR MaLR 8 626 0 180 125 0 0 chr2 12710417 12710449 -240546134 + (TG)n Simple_repeat Simple_repeat 2 33 0 258 380 36 15 chr2 12711137 12711274 -240545309 - L2 LINE L2 -31 3241 3102 2193 114 0 0 chr2 12711715 12712025 -240544558 + AluSc SINE Alu 1 310 0 335 223 21 34 chr2 12713128 12713247 -240543336 - LTR33A LTR ERVL -16 779 389 3024 175 19 7 chr2 12713249 12713787 -240542796 + L1MC/D LINE L1 5276 5819 -514 3388 147 10 34 chr2 12713787 12714030 -240542553 + L1MC1 LINE L1 5757 6004 -329 2394 76 13 0 chr2 12714030 12714333 -240542250 + AluSg SINE Alu 1 307 -3 3388 147 10 34 chr2 12714333 12714673 -240541910 + L1MC1 LINE L1 6004 6328 -5 256 252 103 52 chr2 12715036 12715191 -240541392 - LTR50 LTR ERVL -614 181 19 235 329 92 48 chr2 12715295 12715523 -240541060 - MIR SINE MIR -5 257 20 410 326 93 33 chr2 12716688 12716903 -240539680 - MIR SINE MIR -6 256 29 1960 165 17 31 chr2 12717703 12718054 -240538529 - MER7A DNA MER2_type -1 345 2 1183 191 58 95 chr2 12719290 12719414 -240537169 + MSTD LTR MaLR 60 187 -209 1565 155 0 54 chr2 12719414 12719692 -240536891 - AluSx SINE Alu -11 301 39 1183 191 58 95 chr2 12719692 12719913 -240536670 + MSTD LTR MaLR 187 392 -4 195 293 76 88 chr2 12719936 12720185 -240536398 - L2 LINE L2 -38 3275 3030 329 376 20 36 chr2 12720408 12720658 -240535925 - L2 LINE L2 -570 2744 2499 764 301 53 4 chr2 12721036 12721163 -240535420 + MIR SINE MIR 4 123 -139 4818 98 71 8 chr2 12721163 12721879 -240534704 + L1MA1 LINE L1 5542 6302 0 764 301 53 4 chr2 12721879 12721997 -240534586 + MIR SINE MIR 123 261 -1 305 295 13 0 chr2 12722094 12722172 -240534411 + L2 LINE L2 3234 3312 -1 2428 68 3 3 chr2 12722341 12722635 -240533948 - AluSq SINE Alu -15 298 5 7720 132 39 110 chr2 12723186 12725002 -240531581 - pTR5 LTR ERV1 -1 2437 741 297 0 0 0 chr2 12726058 12726091 -240530492 + (CA)n Simple_repeat Simple_repeat 2 34 0 251 170 21 0 chr2 12726160 12726207 -240530376 - MLT1K LTR MaLR -5 583 536 494 343 102 26 chr2 12726485 12726908 -240529675 - MLT1K LTR MaLR -131 457 3 284 367 48 37 chr2 12726963 12727151 -240529432 + L2 LINE L2 2898 3087 -185 195 222 0 0 chr2 12727284 12727320 -240529263 - L2 LINE L2 -12 3301 3266 243 88 0 0 chr2 12727343 12727377 -240529206 + (TG)n Simple_repeat Simple_repeat 1 34 0 260 265 36 12 chr2 12727389 12727472 -240529111 - MIR3 SINE MIR -6 202 118 248 175 16 0 chr2 12727683 12727746 -240528837 + CT-rich Low_complexity Low_complexity 2 65 0 267 346 152 24 chr2 12728462 12728996 -240527587 - L2 LINE L2 -37 3276 2662 883 263 56 91 chr2 12729034 12729343 -240527240 + MLT1F1 LTR MaLR 67 352 -215 2036 160 31 16 chr2 12729343 12729725 -240526858 - MLT1B LTR MaLR -2 388 1 883 263 56 91 chr2 12729725 12729932 -240526651 + MLT1F1 LTR MaLR 352 565 -2 1313 244 13 21 chr2 12729935 12730429 -240526154 + MLT1F-int LTR MaLR 1 606 -765 3213 146 0 0 chr2 12730630 12731116 -240525467 - MER66B LTR ERV1 0 486 1 256 331 62 38 chr2 12731160 12731320 -240525263 + MLT1F-int LTR MaLR 693 856 -515 270 286 135 0 chr2 12731741 12731867 -240524716 + MLT1F-int LTR MaLR 1227 1369 -2 1025 217 72 136 chr2 12731873 12732343 -240524240 + MLT1F LTR MaLR 5 433 -109 2296 77 0 51 chr2 12732343 12732656 -240523927 - AluY SINE Alu -14 297 1 1025 217 72 136 chr2 12732656 12732757 -240523826 + MLT1F LTR MaLR 433 539 -3 216 245 0 20 chr2 12732758 12732807 -240523776 - L2 LINE L2 -644 2670 2623 577 259 48 24 chr2 12733214 12733546 -240523037 - L1M4 LINE L1 -2820 3326 2987 1666 252 62 22 chr2 12733546 12734098 -240522485 + MER76 LTR ERV 1 574 -114 723 97 0 9 chr2 12734116 12734230 -240522353 + LOR1b LTR ERV1 1 113 -348 2421 66 0 3 chr2 12734785 12735090 -240521493 + AluYa5 SINE Alu 1 304 -7 24 32 0 0 chr2 12735302 12735333 -240521250 + AT_rich Low_complexity Low_complexity 1 31 0 1025 269 71 29 chr2 12735472 12735948 -240520635 - LTR33 LTR ERVL -25 496 1 988 181 10 5 chr2 12736165 12736358 -240520225 + MER50 LTR ERV1 1 194 -540 2028 129 0 0 chr2 12736514 12736801 -240519782 + AluSx SINE Alu 1 287 -25 248 227 45 0 chr2 12737142 12737208 -240519375 + L1ME3A LINE L1 2725 2793 -3353 330 254 54 54 chr2 12737219 12737440 -240519143 + L1ME3A LINE L1 2854 3077 -3069 3367 206 6 0 chr2 12737440 12738129 -240518454 + L1MB8 LINE L1 5484 6176 -2 330 254 54 54 chr2 12738129 12738222 -240518361 + L1ME3A LINE L1 3076 3168 -2978 317 322 0 0 chr2 12738361 12738451 -240518132 + L1MC4 LINE L1 6614 6703 -1339 5520 58 7 1 chr2 12738457 12739506 -240517077 - L1PA7 LINE L1 -18 6113 5037 720 155 6 98 chr2 12739517 12739691 -240516892 - MER58A DNA MER1_type -10 214 57 291 197 26 40 chr2 12739829 12739905 -240516678 - MER58A DNA MER1_type -32 75 1 * 547 207 0 16 chr2 12739905 12740024 -240516559 + MER105 DNA DNA 46 162 -42 628 277 96 54 chr2 12740141 12740808 -240515775 + L1ME3A LINE L1 3257 3958 -2188 2254 90 0 0 chr2 12740808 12741108 -240515475 + AluY SINE Alu 2 301 -10 628 277 96 54 chr2 12741108 12741162 -240515421 + L1ME3A LINE L1 3958 4008 -2138 321 322 6 6 chr2 12741260 12741434 -240515149 + L1ME3A LINE L1 5777 5950 -220 245 341 57 23 chr2 12741701 12741877 -240514706 + MLT1L LTR MaLR 352 533 -82 271 301 24 49 chr2 12742487 12742610 -240513973 - MIR SINE MIR -100 162 43 488 187 22 22 chr2 12742672 12742811 -240513772 + CT-rich Low_complexity Low_complexity 2 140 0 557 204 95 7 chr2 12743367 12743514 -240513069 - MER5A DNA MER1_type -26 163 4 605 192 68 14 chr2 12743520 12743666 -240512917 + MER105 DNA DNA 49 202 -2 404 298 274 4 chr2 12743672 12743917 -240512666 + L2 LINE L2 2248 2558 -756 336 254 234 43 chr2 12743955 12744236 -240512347 + L2 LINE L2 2724 3036 -277 822 159 0 0 chr2 12744298 12744424 -240512159 - FLAM_C SINE Alu -7 136 11 526 278 63 10 chr2 12744435 12744640 -240511943 + L2 LINE L2 3098 3313 0 218 253 0 77 chr2 12745423 12745514 -240511069 - MIR3 SINE MIR -14 194 111 468 262 52 6 chr2 12746452 12746624 -240509959 + MLT1H LTR MaLR 1 180 -369 580 256 68 34 chr2 12747110 12747376 -240509207 + Charlie2b DNA MER1_type 5 279 -2503 257 307 109 0 chr2 12747414 12747515 -240509068 + Charlie2b DNA MER1_type 561 672 -2110 255 211 0 18 chr2 12747521 12747578 -240509005 + CT-rich Low_complexity Low_complexity 2 57 0 26 0 0 0 chr2 12747623 12747649 -240508934 + AT_rich Low_complexity Low_complexity 1 26 0 662 274 11 6 chr2 12747870 12748064 -240508519 + MLT1F LTR MaLR 1 244 -351 2117 132 3 3 chr2 12748794 12749098 -240507485 + AluSx SINE Alu 1 304 -8 193 311 28 5 chr2 12749467 12749542 -240507041 - MIR SINE MIR -110 98 19 1548 197 17 24 chr2 12749598 12749892 -240506691 - AluJo SINE Alu -20 292 1 219 289 157 0 chr2 12750957 12751078 -240505505 - MIR SINE MIR -12 250 111 630 324 57 5 chr2 12751329 12751539 -240505044 - MIR SINE MIR -37 225 5 1033 270 99 42 chr2 12751823 12752297 -240504286 + MLT1D LTR MaLR 5 505 0 1711 233 20 15 chr2 12752558 12752962 -240503621 - MLT2D LTR ERVL -8 406 1 183 287 58 35 chr2 12753753 12753840 -240502743 + MIR SINE MIR 26 114 -148 430 130 120 30 chr2 12753849 12753949 -240502634 - ORSL DNA AcHobo -8 267 159 38 96 0 0 chr2 12753966 12754081 -240502502 + AT_rich Low_complexity Low_complexity 1 115 0 241 220 0 17 chr2 12754130 12754189 -240502394 + MLT1B LTR MaLR 114 171 -219 300 232 0 14 chr2 12754283 12754352 -240502231 - ORSL DNA AcHobo -207 68 1 191 195 73 0 chr2 12754353 12754394 -240502189 + MIR3 SINE MIR 111 154 -54 308 313 65 52 chr2 12754531 12754761 -240501822 + MIR SINE MIR 17 249 -13 1552 207 41 34 chr2 12755091 12755478 -240501105 + MLT1B LTR MaLR 1 390 0 190 334 63 34 chr2 12756151 12756282 -240500301 + MIR SINE MIR 4 138 -70 238 283 104 96 chr2 12756985 12757215 -240499368 + L2 LINE L2 3040 3271 -1 773 267 95 4 chr2 12757671 12757903 -240498680 + MIR SINE MIR 10 262 0 348 338 40 26 chr2 12758514 12758665 -240497918 + MIR3 SINE MIR 39 191 -17 847 223 51 0 chr2 12758704 12758901 -240497682 + MER3 DNA MER1_type 3 209 0 284 348 26 19 chr2 12759183 12759338 -240497245 + L2 LINE L2 3158 3313 0 261 314 48 19 chr2 12759336 12759441 -240497142 - L2 LINE L2 -4 3268 3161 * 250 372 73 15 chr2 12759637 12759774 -240496809 + L2 LINE L2 3121 3265 -7 547 166 11 160 chr2 12759883 12760070 -240496513 + MLT1D LTR MaLR 8 166 -339 1069 198 23 163 chr2 12760171 12760606 -240495977 + MLT2D LTR ERVL 5 395 -19 352 136 39 19 chr2 12760607 12760710 -240495873 + (TCTA)n Simple_repeat Simple_repeat 3 107 0 961 157 25 44 chr2 12760718 12760922 -240495661 + Tigger2 DNA MER2_type 11 210 -2508 756 163 34 7 chr2 12760921 12761068 -240495515 + Tigger2 DNA MER2_type 2554 2704 -14 * 347 102 0 0 chr2 12761078 12761127 -240495456 + MLT2D LTR ERVL 349 397 0 561 240 174 5 chr2 12761127 12761323 -240495260 + MLT1D LTR MaLR 277 505 0 204 40 0 0 chr2 12761978 12762003 -240494580 + (TTC)n Simple_repeat Simple_repeat 2 26 0 1487 194 37 7 chr2 12762008 12762281 -240494302 - AluJo SINE Alu -31 281 1 2332 154 19 26 chr2 12762451 12762880 -240493703 - MSTC LTR MaLR 0 428 3 489 350 25 10 chr2 12762888 12763091 -240493492 - MIR SINE MIR -18 244 39 202 118 29 0 chr2 12764068 12764102 -240492481 + CT-rich Low_complexity Low_complexity 5 39 0 1643 238 85 48 chr2 12764119 12764788 -240491795 - L1MD2 LINE L1 -13 6329 5636 774 295 116 34 chr2 12764792 12765473 -240491110 - L1MD2 LINE L1 -2639 3490 2754 858 210 49 10 chr2 12765482 12765687 -240490896 - L1MC/D LINE L1 -553 5689 5477 277 291 200 0 chr2 12766242 12766352 -240490231 - MER91A DNA MER1_type 0 196 65 713 277 90 93 chr2 12766853 12766958 -240489625 - L1MD2 LINE L1 -4882 1237 1133 2416 90 3 0 chr2 12766958 12767259 -240489324 - AluSg SINE Alu -8 302 1 713 277 90 93 chr2 12767259 12767271 -240489312 - L1MD2 LINE L1 -4986 1133 1122 2181 140 0 0 chr2 12767271 12767578 -240489005 - AluSx SINE Alu 0 312 6 713 277 90 93 chr2 12767578 12768112 -240488471 - L1MD2 LINE L1 -4997 1122 587 1036 83 0 0 chr2 12768177 12768309 -240488274 - AluY SINE Alu -17 294 163 358 388 65 4 chr2 12768330 12768562 -240488021 - L1MD2 LINE L1 -5721 398 153 1995 104 34 83 chr2 12769269 12769596 -240486987 - AluSq SINE Alu -2 311 1 834 138 26 0 chr2 12769596 12769748 -240486835 + MER50 LTR ERV1 566 721 -13 1827 126 41 0 chr2 12769926 12770232 -240486351 + AluSx SINE Alu 1 317 0 248 255 160 13 chr2 12770497 12770728 -240485855 - L1MEd LINE L1 -4887 1232 968 249 275 29 0 chr2 12771869 12771938 -240484645 - MIR SINE MIR -109 153 83 347 341 58 23 chr2 12773046 12773219 -240483364 - MIR3 SINE MIR -12 196 18 728 221 111 0 chr2 12773339 12773538 -240483045 + MER96B DNA MER1_type? 197 417 0 1011 197 26 22 chr2 12774289 12774558 -240482025 - MER58B DNA MER1_type -10 331 62 228 234 0 0 chr2 12774865 12774929 -240481654 + T-rich Low_complexity Low_complexity 1 64 0 408 71 0 0 chr2 12775598 12775654 -240480929 + (TG)n Simple_repeat Simple_repeat 2 57 0 230 292 56 0 chr2 12776223 12776295 -240480288 - MIR SINE MIR -28 234 159 257 200 18 0 chr2 12776307 12776362 -240480221 + MIR SINE MIR 13 68 -194 963 237 157 59 chr2 12776407 12776867 -240479716 + MLT1D LTR MaLR 1 505 0 340 267 0 0 chr2 12776867 12776953 -240479630 + MIR SINE MIR 163 248 -14 424 281 96 37 chr2 12777468 12778037 -240478546 + L1MEc LINE L1 1478 2085 -4874 600 185 29 6 chr2 12778123 12778296 -240478287 + GA-rich Low_complexity Low_complexity 2 178 0 203 213 0 21 chr2 12778339 12778386 -240478197 + A-rich Low_complexity Low_complexity 1 46 0 634 276 71 51 chr2 12778387 12778453 -240478130 + L1MEc LINE L1 2321 2384 -4754 2188 141 0 0 chr2 12778453 12778758 -240477825 + AluY SINE Alu 1 305 -6 634 276 71 51 chr2 12778758 12779181 -240477402 + L1MEc LINE L1 2384 2820 -4318 329 153 59 0 chr2 12779386 12779471 -240477112 + L1MEc LINE L1 3712 3801 -3156 2352 152 5 5 chr2 12779551 12779953 -240476630 - LOR1a LTR ERV1 -2 495 94 713 179 49 31 chr2 12780318 12780541 -240476042 - AluY SINE Alu -84 227 1 2184 97 14 3 chr2 12780570 12780860 -240475723 + AluY SINE Alu 1 293 -18 1855 238 99 34 chr2 12780887 12781475 -240475108 - MLT1E2 LTR MaLR 0 626 1 207 96 58 0 chr2 12782108 12782160 -240474423 + (TCTA)n Simple_repeat Simple_repeat 3 57 0 227 352 48 38 chr2 12782642 12782747 -240473836 + MIR SINE MIR 80 185 -77 259 274 73 37 chr2 12783964 12784128 -240472455 + L1ME LINE L1 5406 5575 -546 216 0 0 0 chr2 12784375 12784399 -240472184 + (A)n Simple_repeat Simple_repeat 1 24 0 47 33 0 0 chr2 12784848 12784909 -240471674 + AT_rich Low_complexity Low_complexity 1 61 0 265 406 31 16 chr2 12785376 12785504 -240471079 - L2 LINE L2 -28 3244 3115 299 313 18 6 chr2 12786186 12786349 -240470234 + (TGAA)n Simple_repeat Simple_repeat 3 167 0 1706 125 0 99 chr2 12786966 12787270 -240469313 - AluSx SINE Alu -3 309 36 322 395 17 31 chr2 12788053 12788342 -240468241 + L3 LINE CR1 1267 1551 -26 26 0 0 0 chr2 12790059 12790085 -240466498 + AT_rich Low_complexity Low_complexity 1 26 0 530 216 0 97 chr2 12790756 12790884 -240465699 + MER5B DNA MER1_type 1 109 -69 2931 113 9 19 chr2 12790884 12791345 -240465238 - L1PA10 LINE L1 -4 6164 5709 530 216 0 97 chr2 12791345 12791392 -240465191 + MER5B DNA MER1_type 109 159 -19 200 406 100 29 chr2 12792264 12792545 -240464038 - L2 LINE L2 -31 3241 2941 269 293 24 67 chr2 12792986 12793150 -240463433 - L1MEd LINE L1 -5643 476 320 210 150 0 0 chr2 12793273 12793313 -240463270 + (CA)n Simple_repeat Simple_repeat 2 41 0 242 227 15 15 chr2 12793369 12793435 -240463148 - MLT1G1 LTR MaLR 0 595 530 2302 106 3 6 chr2 12794160 12794471 -240462112 + AluSx SINE Alu 1 310 -2 1079 248 95 47 chr2 12794640 12795083 -240461500 + MLT1L LTR MaLR 104 567 -48 41 0 0 0 chr2 12795712 12795753 -240460830 + AT_rich Low_complexity Low_complexity 1 41 0 223 236 9 28 chr2 12795979 12796085 -240460498 + A-rich Low_complexity Low_complexity 4 107 0 182 268 18 18 chr2 12796177 12796233 -240460350 + L2 LINE L2 2995 3050 -222 2578 45 0 7 chr2 12796292 12796601 -240459982 - AluY SINE Alu -4 307 1 1947 165 74 20 chr2 12796648 12797053 -240459530 - MSTA LTR MaLR -1 427 1 1119 197 23 40 chr2 12797131 12797603 -240458980 - pTR5 LTR ERV1 -1189 1249 741 955 236 25 0 chr2 12797686 12797889 -240458694 + MER58A DNA MER1_type 2 209 -15 3782 9 0 0 chr2 12797892 12798338 -240458245 + L1HS LINE L1 5710 6155 0 25 0 0 0 chr2 12798338 12798363 -240458220 + AT_rich Low_complexity Low_complexity 1 25 0 240 59 0 0 chr2 12798380 12798414 -240458169 + (A)n Simple_repeat Simple_repeat 1 34 0 251 404 0 34 chr2 12798458 12798604 -240457979 + L2 LINE L2 3084 3224 -48 451 320 26 7 chr2 12798652 12798805 -240457778 - MIR3 SINE MIR -38 170 15 211 376 64 18 chr2 12800187 12800296 -240456287 + L2 LINE L2 3118 3231 -41 303 274 36 0 chr2 12801495 12801579 -240455004 - MIR SINE MIR -122 140 54 304 191 0 0 chr2 12802037 12802084 -240454499 - L2 LINE L2 -21 3251 3205 351 330 16 69 chr2 12802223 12802427 -240454156 - MIR SINE MIR -45 217 18 314 273 78 23 chr2 12802601 12802729 -240453854 - L1ME4a LINE L1 -115 6006 5872 1701 218 76 44 chr2 12802731 12803281 -240453302 - MLT1E2 LTR MaLR -2 624 57 351 259 74 0 chr2 12803351 12803459 -240453124 - L2 LINE L2 -9 3304 3189 340 275 206 5 chr2 12803506 12803724 -240452859 - L1ME4a LINE L1 -299 5822 5561 22 0 0 0 chr2 12804143 12804165 -240452418 + AT_rich Low_complexity Low_complexity 1 22 0 239 276 0 0 chr2 12806055 12806113 -240450470 + (TG)n Simple_repeat Simple_repeat 1 58 0 610 311 27 32 chr2 12806798 12807017 -240449566 - MIR SINE MIR -19 243 26 324 0 0 0 chr2 12807070 12807106 -240449477 + (CA)n Simple_repeat Simple_repeat 2 37 0 227 244 23 12 chr2 12807589 12807675 -240448908 - L1 LINE L1 -1110 5036 4950 304 281 116 66 chr2 12807858 12808100 -240448483 - L1 LINE L1 -3228 2918 2665 191 36 36 0 chr2 12808495 12808523 -240448060 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1923 127 0 24 chr2 12808526 12808817 -240447766 - AluSx SINE Alu -28 284 1 1256 303 78 16 chr2 12808860 12810277 -240446306 - L1ME3 LINE L1 -81 6081 4570 367 310 92 15 chr2 12810291 12810562 -240446021 - L1ME3 LINE L1 -1749 4397 4106 307 279 109 57 chr2 12810866 12811113 -240445470 + L1ME4a LINE L1 5825 6084 -37 2103 122 3 3 chr2 12812393 12812689 -240443894 + AluSx SINE Alu 1 296 -16 1915 156 68 11 chr2 12812802 12813155 -240443428 - THE1C LTR MaLR -2 373 1 261 351 45 19 chr2 12813702 12813856 -240442727 - MIR SINE MIR -84 178 21 427 176 12 0 chr2 12814543 12814628 -240441955 - L1PA16 LINE L1 -5 6161 6076 243 235 17 9 chr2 12816308 12816423 -240440160 + CT-rich Low_complexity Low_complexity 1 116 0 24 77 0 0 chr2 12817197 12817249 -240439334 + AT_rich Low_complexity Low_complexity 1 52 0 1854 135 3 48 chr2 12818077 12818389 -240438194 - AluY SINE Alu -5 306 9 360 355 87 19 chr2 12821308 12821548 -240435035 + MIR SINE MIR 2 256 -6 393 22 0 0 chr2 12822143 12822189 -240434394 + (CA)n Simple_repeat Simple_repeat 1 46 0 191 181 14 0 chr2 12822195 12822267 -240434316 + CT-rich Low_complexity Low_complexity 2 74 0 1195 212 20 7 chr2 12822766 12823058 -240433525 - L1MA8 LINE L1 -2 6289 5994 205 265 29 29 chr2 12823099 12823167 -240433416 - L2 LINE L2 -25 3288 3221 506 181 0 0 chr2 12824396 12824479 -240432104 - MLT1J LTR MaLR -332 179 97 513 290 61 49 chr2 12824708 12825283 -240431300 + L1M4 LINE L1 3808 4389 -1757 23 0 0 0 chr2 12825550 12825573 -240431010 + AT_rich Low_complexity Low_complexity 1 23 0 2093 128 75 20 chr2 12825604 12825949 -240430634 + THE1B LTR MaLR 1 364 0 2970 123 0 19 chr2 12827066 12827452 -240429131 - L1PA15 LINE L1 -4 6161 5769 180 0 0 0 chr2 12827452 12827472 -240429111 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 2093 93 11 0 chr2 12827472 12827750 -240428833 - AluY SINE Alu -30 281 1 2970 123 0 19 chr2 12827750 12827825 -240428758 - L1PA15 LINE L1 -394 5771 5708 602 303 95 36 chr2 12827911 12828463 -240428120 - L1MCa LINE L1 -5826 669 34 264 59 0 0 chr2 12828914 12828948 -240427635 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 215 361 76 13 chr2 12829015 12829173 -240427410 - MIR SINE MIR -64 198 31 258 237 17 0 chr2 12829708 12829767 -240426816 + L3 LINE CR1 1313 1372 -205 3321 236 44 29 chr2 12829900 12831230 -240425353 - L1M4c LINE L1 -4480 2166 817 264 222 0 0 chr2 12831230 12831302 -240425281 + A-rich Low_complexity Low_complexity 1 72 0 455 285 32 0 chr2 12831323 12831446 -240425137 - L1M4c LINE L1 -5804 738 612 1398 224 49 29 chr2 12831455 12831804 -240424779 + MLT1A1 LTR MaLR 10 365 0 292 339 66 19 chr2 12831814 12832071 -240424512 - L1M4c LINE L1 -5936 606 338 1826 179 39 18 chr2 12832530 12832913 -240423670 + MLT1B LTR MaLR 1 467 0 978 302 109 10 chr2 12833080 12833576 -240423007 + HAL1 LINE L1 202 746 -1761 345 247 0 0 chr2 12833579 12833656 -240422927 - MER105 DNA DNA -8 196 120 363 222 40 10 chr2 12833704 12833803 -240422780 - MER105 DNA DNA -98 106 5 1947 269 62 31 chr2 12833832 12834736 -240421847 + HAL1 LINE L1 788 1719 -788 24 32 0 0 chr2 12834903 12834934 -240421649 + AT_rich Low_complexity Low_complexity 1 31 0 181 309 55 0 chr2 12835017 12835072 -240421511 + MIR SINE MIR 73 130 -78 194 262 0 0 chr2 12835512 12835554 -240421029 + L2 LINE L2 3219 3260 -12 548 340 60 28 chr2 12836327 12836612 -240419971 - L3 LINE CR1 -48 1529 1236 283 250 42 14 chr2 12837425 12837497 -240419086 + MIR SINE MIR 21 94 -114 573 313 63 35 chr2 12838482 12838849 -240417734 + LTR33 LTR ERVL 90 466 -55 474 291 128 0 chr2 12838949 12839027 -240417556 + MIR SINE MIR 28 95 -167 523 75 12 12 chr2 12839027 12839107 -240417476 + MADE1 DNA Mariner 1 80 0 474 291 128 0 chr2 12839107 12839207 -240417376 + MIR SINE MIR 95 229 -33 204 320 51 13 chr2 12839874 12839952 -240416631 + MIR SINE MIR 80 160 -102 2131 116 3 7 chr2 12840070 12840364 -240416219 - AluSp SINE Alu -14 299 7 26 30 0 0 chr2 12840489 12840522 -240416061 + AT_rich Low_complexity Low_complexity 1 33 0 452 264 74 7 chr2 12840633 12840781 -240415802 - MIR SINE MIR -15 247 90 1744 179 72 19 chr2 12840786 12841180 -240415403 + MLT1D LTR MaLR 6 503 -2 270 309 0 100 chr2 12841182 12841292 -240415291 - MIR SINE MIR -155 107 9 1055 235 129 62 chr2 12841415 12841876 -240414707 + MLT1H LTR MaLR 14 547 -2 447 311 87 13 chr2 12842032 12842241 -240414342 - MIR SINE MIR -31 231 12 2404 114 17 3 chr2 12842973 12843323 -240413260 - THE1A LTR MaLR 0 355 1 11139 101 23 1 chr2 12843323 12844870 -240411713 - THE1A-int LTR MaLR 0 1580 1 479 196 74 12 chr2 12845080 12845198 -240411385 + MER20B DNA MER1_type 36 159 -60 5208 209 65 41 chr2 12845285 12846629 -240409954 + L1MC3 LINE L1 5530 6912 -873 1789 155 0 31 chr2 12846629 12846948 -240409635 + AluSx SINE Alu 1 310 0 5208 209 65 41 chr2 12846948 12847021 -240409562 + L1MC3 LINE L1 6912 6982 -803 29 60 0 0 chr2 12847054 12847104 -240409479 + AT_rich Low_complexity Low_complexity 1 50 0 311 183 24 24 chr2 12847152 12847234 -240409349 + L1MC3 LINE L1 7014 7095 -690 281 237 32 32 chr2 12847234 12847327 -240409256 + MLT1F1 LTR MaLR 33 125 -442 1384 191 28 7 chr2 12847333 12847767 -240408816 + L1MC3 LINE L1 7197 7757 -28 189 0 0 0 chr2 12847767 12847788 -240408795 + (TC)n Simple_repeat Simple_repeat 2 22 0 287 224 24 0 chr2 12847788 12847873 -240408710 - L1MC4 LINE L1 -1339 6703 6617 1163 279 53 36 chr2 12848044 12848606 -240407977 + MER20B DNA MER1_type 211 782 -1 337 347 90 0 chr2 12848822 12849044 -240407539 + MLT1J2 LTR MaLR 209 450 0 259 333 101 12 chr2 12849046 12849214 -240407369 + MIR SINE MIR 56 238 -24 198 0 0 0 chr2 12850853 12850875 -240405708 + (TGAA)n Simple_repeat Simple_repeat 2 23 0 191 337 54 22 chr2 12851694 12851786 -240404797 + L2 LINE L2 3171 3265 -7 1367 217 39 22 chr2 12852115 12852474 -240404109 - MLT1A1 LTR MaLR 0 365 1 240 272 0 86 chr2 12853134 12853215 -240403368 + MIR SINE MIR 67 140 -68 1810 169 46 25 chr2 12853643 12854010 -240402573 + THE1C LTR MaLR 1 375 0 298 267 112 0 chr2 12854845 12854961 -240401622 + L3 LINE CR1 1289 1417 -160 300 308 33 0 chr2 12855234 12855325 -240401258 + L2 LINE L2 2264 2357 -957 598 221 55 0 chr2 12855328 12855455 -240401128 + L1PB4 LINE L1 6022 6155 -1 191 36 36 0 chr2 12855458 12855486 -240401097 + (GA)n Simple_repeat Simple_repeat 2 30 0 234 0 0 0 chr2 12855992 12856018 -240400565 + (TG)n Simple_repeat Simple_repeat 1 26 0 23 68 0 0 chr2 12856098 12856142 -240400441 + AT_rich Low_complexity Low_complexity 1 44 0 1201 259 84 30 chr2 12856650 12857170 -240399413 + MLT1E LTR MaLR 1 593 0 493 283 28 14 chr2 12857864 12857989 -240398594 - L2 LINE L2 -5 3308 3179 2060 127 34 45 chr2 12857989 12858368 -240398215 - THE1C LTR MaLR 0 375 1 493 283 28 14 chr2 12858368 12858387 -240398196 - L2 LINE L2 -134 3179 3162 732 276 44 27 chr2 12859628 12859921 -240396662 - MER20B DNA MER1_type -288 495 198 2258 61 20 20 chr2 12860116 12860413 -240396170 - AluY SINE Alu -14 297 1 27 49 0 0 chr2 12860492 12860533 -240396050 + AT_rich Low_complexity Low_complexity 1 41 0 1418 222 11 3 chr2 12860533 12860817 -240395766 - AluJo SINE Alu -16 286 1 1213 93 114 41 chr2 12860822 12861068 -240395515 - L1MA8 LINE L1 -3 6288 6025 14264 143 17 8 chr2 12861391 12863787 -240392796 + Tigger1 DNA MER2_type 1 2417 -1 1367 132 30 8 chr2 12864007 12864242 -240392341 - L1MA9 LINE L1 -1 6311 6072 1165 313 79 34 chr2 12864722 12864779 -240391804 - LTR16C LTR ERVL 0 491 438 1552 195 45 25 chr2 12864779 12865133 -240391450 - MLT1A1 LTR MaLR 0 365 5 1165 313 79 34 chr2 12865133 12865544 -240391039 - LTR16C LTR ERVL -53 438 2 25 31 0 0 chr2 12867145 12867177 -240389406 + AT_rich Low_complexity Low_complexity 1 32 0 352 306 47 12 chr2 12867426 12867596 -240388987 + MIR SINE MIR 79 254 -8 234 341 0 11 chr2 12867602 12867690 -240388893 + CT-rich Low_complexity Low_complexity 1 87 0 1934 93 0 8 chr2 12867723 12867992 -240388591 + AluSc SINE Alu 37 303 0 206 347 112 0 chr2 12868028 12868126 -240388457 - L2 LINE L2 -12 3301 3193 * 209 355 73 0 chr2 12868093 12868217 -240388366 + MIR SINE MIR 95 227 -35 261 163 0 0 chr2 12868610 12868659 -240387924 + (TG)n Simple_repeat Simple_repeat 2 50 0 725 133 0 0 chr2 12868987 12869092 -240387491 - MSTA LTR MaLR -323 105 1 260 173 0 0 chr2 12869642 12869694 -240386889 + L1MC4 LINE L1 6652 6703 -1339 327 164 0 0 chr2 12869694 12869755 -240386828 + (CATA)n Simple_repeat Simple_repeat 4 64 0 201 341 0 0 chr2 12869769 12869851 -240386732 + (CATATA)n Simple_repeat Simple_repeat 3 84 0 552 309 106 29 chr2 12869898 12870312 -240386271 - MLT1J1 LTR MaLR 0 446 1 1510 156 66 43 chr2 12870578 12870879 -240385704 + AluSg SINE Alu 1 308 -2 25 31 0 0 chr2 12871925 12871957 -240384626 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr2 12872425 12872446 -240384137 + AT_rich Low_complexity Low_complexity 1 21 0 269 358 16 16 chr2 12872787 12872910 -240383673 - L2 LINE L2 -554 2760 2638 209 198 210 25 chr2 12875153 12875234 -240381349 - MIR SINE MIR -70 138 43 190 270 34 67 chr2 12875269 12875358 -240381225 - L2 LINE L2 -8 3264 3179 315 154 10 48 chr2 12876146 12876250 -240380333 + A-rich Low_complexity Low_complexity 1 100 0 321 281 7 44 chr2 12876264 12876399 -240380184 + L2 LINE L2 2829 2958 -355 332 273 18 92 chr2 12876422 12876649 -240379934 + L2 LINE L2 3077 3286 -27 346 321 25 56 chr2 12877106 12877302 -240379281 + MIR3 SINE MIR 13 202 -6 198 0 0 0 chr2 12878577 12878599 -240377984 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 227 253 0 0 chr2 12880255 12880330 -240376253 + L1MC4 LINE L1 6629 6703 -1339 272 200 14 0 chr2 12880421 12880491 -240376092 + (TATATG)n Simple_repeat Simple_repeat 1 71 0 384 313 67 0 chr2 12881109 12881243 -240375340 + MIR SINE MIR 103 245 -17 221 146 21 0 chr2 12881256 12881304 -240375279 + (CA)n Simple_repeat Simple_repeat 1 49 0 207 0 0 0 chr2 12881597 12881620 -240374963 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 5487 149 8 42 chr2 12882041 12882773 -240373810 - L1MA4A LINE L1 -14 6289 5603 1884 126 3 50 chr2 12882773 12883090 -240373493 + AluSx SINE Alu 9 310 -2 5487 149 8 42 chr2 12883090 12883429 -240373154 - L1MA4A LINE L1 -700 5603 5254 270 274 12 24 chr2 12883528 12883612 -240372971 + MLT1L LTR MaLR 3 85 -530 309 284 55 0 chr2 12884187 12884314 -240372269 - MIR SINE MIR -56 206 73 317 322 97 40 chr2 12884383 12884654 -240371929 + L2 LINE L2 2766 3083 -189 199 364 34 11 chr2 12884737 12884825 -240371758 + MER5A DNA MER1_type 82 171 -18 509 301 38 25 chr2 12886971 12887454 -240369129 + L1MCc LINE L1 1167 1816 -5125 257 299 64 72 chr2 12887462 12887823 -240368760 + L1MCc LINE L1 1960 2317 -4624 14932 154 33 15 chr2 12887860 12890529 -240366054 + Tigger2 DNA MER2_type 1 2718 0 198 236 0 0 chr2 12890590 12890645 -240365938 + (CATATA)n Simple_repeat Simple_repeat 5 59 0 439 269 83 19 chr2 12890656 12890872 -240365711 + L1ME2 LINE L1 5254 5483 -681 373 312 19 26 chr2 12890876 12891030 -240365553 + LTR52 LTR ERVL 132 284 -137 1820 253 62 29 chr2 12891084 12891741 -240364842 + L1ME2 LINE L1 5479 6157 -7 785 232 121 10 chr2 12893036 12893234 -240363349 - MER58A DNA MER1_type -2 222 3 187 341 57 0 chr2 12893797 12893885 -240362698 + L2 LINE L2 2307 2399 -915 462 223 14 93 chr2 12894160 12894247 -240362336 + MLT1H LTR MaLR 53 127 -422 2045 106 0 48 chr2 12894247 12894558 -240362025 - AluSx SINE Alu -12 300 5 462 223 14 93 chr2 12894558 12894609 -240361974 + MLT1H LTR MaLR 127 180 -369 468 173 15 25 chr2 12894609 12894805 -240361778 + GA-rich Low_complexity Low_complexity 1 194 0 1326 197 27 17 chr2 12894960 12895255 -240361328 - AluJo SINE Alu 0 312 15 22 0 0 0 chr2 12895877 12895899 -240360684 + AT_rich Low_complexity Low_complexity 1 22 0 248 338 119 6 chr2 12896181 12896341 -240360242 - MIR SINE MIR 0 262 85 1110 187 51 129 chr2 12897612 12898007 -240358576 - MLT1A1 LTR MaLR -1 364 1 182 280 80 0 chr2 12898397 12898447 -240358136 - MIR SINE MIR -64 144 91 1989 137 0 35 chr2 12898665 12898980 -240357603 + AluSx SINE Alu 1 304 -8 375 101 0 17 chr2 12898999 12899066 -240357517 - AluSp SINE Alu -9 292 241 457 103 0 134 chr2 12899066 12899163 -240357420 - AluSp SINE Alu -160 153 70 275 321 141 21 chr2 12899860 12900150 -240356433 - L2 LINE L2 -675 2639 2315 337 211 43 31 chr2 12900227 12900388 -240356195 + (TA)n Simple_repeat Simple_repeat 1 163 0 264 66 50 94 chr2 12900493 12900674 -240355909 + (TATAA)n Simple_repeat Simple_repeat 4 176 0 434 79 92 6 chr2 12901133 12901297 -240355286 + (TA)n Simple_repeat Simple_repeat 2 179 0 61 15 0 0 chr2 12901297 12901365 -240355218 + AT_rich Low_complexity Low_complexity 1 68 0 2262 269 93 55 chr2 12901998 12904185 -240352398 + L1ME3 LINE L1 2923 5201 -945 2428 69 3 0 chr2 12904185 12904488 -240352095 + AluY SINE Alu 1 304 -7 2262 269 93 55 chr2 12904488 12904561 -240352022 + L1ME3 LINE L1 5201 5270 -876 180 245 0 0 chr2 12904572 12904625 -240351958 + (TA)n Simple_repeat Simple_repeat 1 53 0 27 29 0 0 chr2 12904641 12904675 -240351908 + AT_rich Low_complexity Low_complexity 1 34 0 1352 261 125 39 chr2 12904727 12905482 -240351101 + L1ME3 LINE L1 5267 6100 -70 989 90 0 0 chr2 12905482 12905616 -240350967 + L1PA10 LINE L1 6031 6164 -4 1352 261 125 39 chr2 12905616 12905686 -240350897 + L1ME3 LINE L1 6100 6163 -7 204 340 97 40 chr2 12905691 12906020 -240350563 - L2 LINE L2 -1300 2014 1667 391 52 0 52 chr2 12906044 12906102 -240350481 - MLT2A1 LTR ERVL 0 453 399 224 233 0 0 chr2 12906118 12906161 -240350422 + (CATATA)n Simple_repeat Simple_repeat 2 44 0 2460 93 77 8 chr2 12906162 12906538 -240350045 - MLT2A1 LTR ERVL -40 404 3 58 13 0 13 chr2 12907852 12907877 -240348706 + AT_rich Low_complexity Low_complexity 1 25 -50 1989 122 7 3 chr2 12907877 12908165 -240348418 + AluSp SINE Alu 1 289 -24 58 13 0 13 chr2 12908165 12908215 -240348368 + AT_rich Low_complexity Low_complexity 25 75 0 300 318 95 0 chr2 12908993 12909119 -240347464 + MIR SINE MIR 49 186 -76 426 235 29 0 chr2 12909659 12909761 -240346822 - L1MB8 LINE L1 -200 5978 5874 2566 231 45 6 chr2 12909790 12910487 -240346096 - L1MB8 LINE L1 -1049 5097 4374 24296 178 17 23 chr2 12910493 12911602 -240344981 + L1PA12 LINE L1 8 1123 -6446 183 42 0 0 chr2 12911602 12911626 -240344957 + (CAA)n Simple_repeat Simple_repeat 1 24 0 24296 178 17 23 chr2 12911626 12912590 -240343993 + L1PA12 LINE L1 1123 2092 -5477 2357 93 7 0 chr2 12912590 12912891 -240343692 - AluSq SINE Alu -4 309 7 24296 178 17 23 chr2 12912891 12914692 -240341891 + L1PA12 LINE L1 2092 3903 -3666 207 0 0 0 chr2 12914692 12914715 -240341868 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 24296 178 17 23 chr2 12914715 12916673 -240339910 + L1PA12 LINE L1 3903 7112 -457 307 255 168 37 chr2 12917665 12917826 -240338757 + MIR SINE MIR 49 230 -32 1911 154 3 3 chr2 12918054 12918346 -240338237 + AluSx SINE Alu 8 299 -13 350 321 64 32 chr2 12919328 12919460 -240337123 + L1ME3 LINE L1 3718 3844 -2302 2063 159 27 30 chr2 12919460 12919825 -240336758 - THE1B LTR MaLR 0 364 1 350 321 64 32 chr2 12919825 12920100 -240336483 + L1ME3 LINE L1 3844 4138 -2008 21 0 0 0 chr2 12920103 12920124 -240336459 + AT_rich Low_complexity Low_complexity 1 21 0 488 310 125 53 chr2 12920161 12920842 -240335741 + L1ME3 LINE L1 4205 4964 -1182 414 0 0 0 chr2 12920846 12920892 -240335691 + (CA)n Simple_repeat Simple_repeat 2 47 0 319 291 119 64 chr2 12920895 12921222 -240335361 + L1ME3 LINE L1 5002 5346 -800 394 264 53 120 chr2 12921248 12921756 -240334827 + L1ME3 LINE L1 5381 5854 -308 2296 86 0 0 chr2 12922169 12922459 -240334124 - AluSc SINE Alu -19 290 1 1097 235 87 26 chr2 12923947 12924407 -240332176 - Charlie2 DNA MER1_type -47 2815 2328 664 222 79 0 chr2 12924593 12924809 -240331774 - Charlie2a DNA MER1_type -1851 1011 779 283 91 400 0 chr2 12924812 12924867 -240331716 + MADE1 DNA Mariner 4 80 0 2182 132 83 5 chr2 12924935 12925321 -240331262 + MSTA LTR MaLR 1 416 -12 359 256 16 31 chr2 12925333 12925462 -240331121 - Charlie2a DNA MER1_type -2191 591 465 732 112 0 0 chr2 12925975 12926082 -240330501 + AluSg SINE Alu 1 107 -203 2330 95 0 0 chr2 12926099 12926405 -240330178 + AluY SINE Alu 1 306 -5 221 298 87 19 chr2 12926579 12926683 -240329900 - L2 LINE L2 -41 3231 3121 274 313 0 26 chr2 12928259 12928394 -240328189 + MIR3 SINE MIR 3 176 -32 22 0 0 0 chr2 12928482 12928504 -240328079 + AT_rich Low_complexity Low_complexity 1 22 0 336 303 35 35 chr2 12928657 12928802 -240327781 - L2 LINE L2 -1 3312 3168 1631 214 70 20 chr2 12929004 12929444 -240327139 - MLT1C LTR MaLR 0 467 6 322 278 76 49 chr2 12930579 12930723 -240325860 - MER91A DNA MER1_type -29 167 20 271 296 134 0 chr2 12930998 12931140 -240325443 + MIR SINE MIR 48 208 -54 2527 68 0 0 chr2 12931631 12931955 -240324628 + L1PA5 LINE L1 5831 6154 0 2141 199 83 6 chr2 12932731 12933223 -240323360 + L1MD2 LINE L1 5428 5957 -402 7215 170 38 6 chr2 12933269 12935667 -240320916 - L1MA4 LINE L1 -11 6289 3811 186 43 0 0 chr2 12986462 12986485 -240270098 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 302 167 0 0 chr2 12986489 12986543 -240270040 - L1MA6 LINE L1 -13 6287 6234 3483 213 21 18 chr2 12986545 12987569 -240269014 - L1MA6 LINE L1 -248 6052 5017 * 5178 144 53 19 chr2 12987566 12988482 -240268101 - THE1C-int LTR MaLR -632 948 1 1363 145 84 95 chr2 12988482 12988861 -240267722 - THE1C LTR MaLR 0 375 1 1736 278 44 29 chr2 12988861 12989379 -240267204 - L1M3b LINE L1 -5755 526 1 2056 126 48 28 chr2 12989473 12989830 -240266753 + THE1B LTR MaLR 1 364 0 21 82 0 0 chr2 12989934 12989983 -240266600 + AT_rich Low_complexity Low_complexity 1 49 0 1200 214 58 79 chr2 12990165 12990347 -240266236 - MLT1A2 LTR MaLR 0 374 190 366 23 0 0 chr2 12990347 12990390 -240266193 + (TG)n Simple_repeat Simple_repeat 1 43 0 1200 214 58 79 chr2 12990390 12990585 -240265998 - MLT1A2 LTR MaLR -184 190 5 2290 229 4 17 chr2 12991063 12991539 -240265044 - MER70A LTR ERVL -2 470 1 187 273 189 38 chr2 12992085 12992217 -240264366 + MIR3 SINE MIR 42 193 -15 216 250 18 0 chr2 12992537 12992593 -240263990 + (CACCC)n Simple_repeat Simple_repeat 1 57 0 183 314 86 71 chr2 12992636 12992846 -240263737 + MIR SINE MIR 50 262 0 256 145 16 16 chr2 12994201 12994263 -240262320 + (TA)n Simple_repeat Simple_repeat 2 63 0 304 297 75 82 chr2 12994294 12994937 -240261646 - L1MC/D LINE L1 -470 5651 5266 1330 181 140 16 chr2 12995262 12995627 -240260956 + MER65A LTR ERV1 23 432 -13 596 337 70 22 chr2 12995668 12996223 -240260360 - L1MC/D LINE L1 -1249 4897 4316 735 226 132 116 chr2 12997068 12997584 -240258999 + MLT1F1 LTR MaLR 3 567 0 663 296 47 19 chr2 12998041 12998254 -240258329 + MER58A DNA MER1_type 4 222 -2 362 343 63 38 chr2 12998590 12998905 -240257678 - MLT1H LTR MaLR -198 351 29 2200 143 19 11 chr2 13000274 13000646 -240255937 + THE1C LTR MaLR 1 375 0 332 317 41 0 chr2 13000952 13001075 -240255508 - MIR SINE MIR -48 214 87 938 244 15 29 chr2 13001480 13001754 -240254829 - MLT1C LTR MaLR -194 273 4 185 388 0 15 chr2 13001786 13001853 -240254730 + L3b LINE CR1 1501 1566 -17 249 83 0 0 chr2 13002234 13002270 -240254313 + (TG)n Simple_repeat Simple_repeat 2 37 0 263 390 94 0 chr2 13002696 13002855 -240253728 - MIR SINE MIR -44 218 45 396 40 0 0 chr2 13002954 13003004 -240253579 + (TG)n Simple_repeat Simple_repeat 1 50 0 791 263 87 76 chr2 13003321 13003826 -240252757 - MLT2B3 LTR ERVL -20 534 21 1312 246 25 17 chr2 13003826 13004188 -240252395 + MLT1A1 LTR MaLR 1 365 0 791 263 87 76 chr2 13004188 13004210 -240252373 - MLT2B3 LTR ERVL -533 21 1 425 248 55 0 chr2 13005895 13006004 -240250579 + MIR SINE MIR 89 203 -59 407 76 51 38 chr2 13006004 13006083 -240250500 + L1MB7 LINE L1 6104 6183 -1 180 0 0 0 chr2 13006778 13006798 -240249785 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2327 67 0 7 chr2 13007370 13007687 -240248896 + AluY SINE Alu 3 311 0 236 336 69 0 chr2 13007772 13007903 -240248680 - MIR SINE MIR -42 220 81 199 166 178 0 chr2 13008161 13008217 -240248366 - MIR SINE MIR -65 143 84 333 82 0 0 chr2 13008316 13008365 -240248218 + (TATAG)n Simple_repeat Simple_repeat 2 50 0 1120 300 58 33 chr2 13009040 13009736 -240246847 + HAL1 LINE L1 1482 2194 -313 316 216 5 146 chr2 13009737 13009922 -240246661 + HAL1 LINE L1 2324 2482 -25 26 64 0 0 chr2 13011152 13011199 -240245384 + AT_rich Low_complexity Low_complexity 1 47 0 180 323 20 50 chr2 13011529 13011628 -240244955 - MIR SINE MIR -92 116 21 1337 228 0 0 chr2 13011811 13012079 -240244504 + MLT1A1 LTR MaLR 1 268 -97 4328 82 39 3 chr2 13012390 13013014 -240243569 - L1P LINE L1 -1726 4420 3775 187 306 97 0 chr2 13013177 13013239 -240243344 - L2 LINE L2 -89 3183 3116 1805 156 26 0 chr2 13013247 13013549 -240243034 + AluSx SINE Alu 1 310 -2 700 198 0 11 chr2 13013877 13014059 -240242524 + GA-rich Low_complexity Low_complexity 1 180 0 266 333 68 14 chr2 13017757 13017979 -240238604 + L1ME LINE L1 4553 4786 -1360 1872 155 137 11 chr2 13018162 13018542 -240238041 + MSTA LTR MaLR 1 428 0 8619 156 16 36 chr2 13018544 13020151 -240236432 + MSTA-int LTR MaLR 3 1576 -4 1976 146 125 18 chr2 13020155 13020540 -240236043 + MSTA LTR MaLR 1 426 -2 2513 181 42 9 chr2 13020628 13021169 -240235414 - L1PB4 LINE L1 0 6156 5598 378 372 41 11 chr2 13021287 13021655 -240234928 + L1ME LINE L1 5258 5636 -526 451 366 71 17 chr2 13021690 13021985 -240234598 - L2 LINE L2 -8 3305 2995 826 300 63 101 chr2 13022023 13022909 -240233674 - L2 LINE L2 -420 2894 2042 31 88 0 0 chr2 13023387 13023467 -240233116 + AT_rich Low_complexity Low_complexity 1 80 0 2215 198 15 22 chr2 13023620 13024080 -240232503 + MSTB2 LTR MaLR 1 457 0 2488 205 71 79 chr2 13024080 13024854 -240231729 + MSTB2-int LTR MaLR 2 769 -882 1028 208 0 0 chr2 13024854 13025051 -240231532 + MLT1A1 LTR MaLR 261 457 0 229 320 95 0 chr2 13025276 13025423 -240231160 + L1ME LINE L1 5651 5811 -310 40 37 0 0 chr2 13025477 13025531 -240231052 + AT_rich Low_complexity Low_complexity 1 54 0 840 182 72 8 chr2 13026104 13026340 -240230243 - MER33 DNA MER1_type -19 305 55 1621 189 34 10 chr2 13026408 13026705 -240229878 - AluJb SINE Alu -8 304 1 264 235 44 81 chr2 13026706 13026842 -240229741 - MER104 DNA Tc2 -42 138 8 342 333 60 51 chr2 13027044 13027278 -240229305 - MLT1K LTR MaLR -234 354 119 326 279 0 74 chr2 13029136 13029258 -240227325 + MER74B LTR ERVL 70 182 -440 272 24 0 48 chr2 13029266 13029308 -240227275 + (TTA)n Simple_repeat Simple_repeat 3 42 0 7016 40 0 11 chr2 13029308 13030169 -240226414 - L1PA5 LINE L1 -18 6136 5285 366 285 44 44 chr2 13030172 13030309 -240226274 + MER74B LTR ERVL 380 516 -106 25 0 0 0 chr2 13030461 13030486 -240226097 + AT_rich Low_complexity Low_complexity 1 25 0 297 241 46 11 chr2 13030759 13030846 -240225737 + MLT1J2 LTR MaLR 66 155 -295 1690 252 65 55 chr2 13031051 13031994 -240224589 - L1MC5 LINE L1 -55 7906 6955 1529 246 56 27 chr2 13032203 13032682 -240223901 - L1MC5 LINE L1 -2007 5801 5309 28 29 0 0 chr2 13033073 13033108 -240223475 + AT_rich Low_complexity Low_complexity 1 35 0 2132 183 44 12 chr2 13034219 13034624 -240221959 - MER47B DNA MER2_type 0 418 1 2626 38 0 10 chr2 13035012 13035326 -240221257 - AluY SINE Alu 0 311 1 29 28 0 0 chr2 13035326 13035362 -240221221 + AT_rich Low_complexity Low_complexity 1 36 0 387 231 56 50 chr2 13035415 13035575 -240221008 - L1MC5 LINE L1 -1465 4681 4521 277 276 172 5 chr2 13035666 13035869 -240220714 + L1M4 LINE L1 3515 3751 -2395 593 156 0 0 chr2 13035869 13035959 -240220624 + 7SLRNA srpRNA srpRNA 213 302 -18 198 0 0 0 chr2 13035959 13035981 -240220602 + (TAA)n Simple_repeat Simple_repeat 2 23 0 271 261 93 35 chr2 13035989 13036299 -240220284 + L1M4 LINE L1 3760 4087 -2059 745 249 31 55 chr2 13036327 13036708 -240219875 + L1M4 LINE L1 4222 4593 -1553 191 233 23 0 chr2 13037513 13037556 -240219027 + MER5A DNA MER1_type 111 154 -35 23 33 0 0 chr2 13037556 13037586 -240218997 + AT_rich Low_complexity Low_complexity 1 30 0 269 321 42 71 chr2 13038076 13038244 -240218339 - MIR3 SINE MIR -43 165 3 186 43 0 0 chr2 13038533 13038556 -240218027 + (TTTTA)n Simple_repeat Simple_repeat 4 26 0 428 135 34 0 chr2 13038559 13038648 -240217935 - L1MA7 LINE L1 -2 6289 6198 411 83 0 0 chr2 13039284 13039344 -240217239 + (GGAA)n Simple_repeat Simple_repeat 3 62 0 619 337 108 28 chr2 13039344 13040474 -240216109 + L1ME3A LINE L1 4143 5392 -772 2207 120 0 0 chr2 13040474 13040774 -240215809 - AluSq SINE Alu -13 300 1 619 337 108 28 chr2 13040774 13040871 -240215712 + L1ME3A LINE L1 5392 5480 -684 245 353 73 10 chr2 13041041 13041330 -240215253 + L1ME3A LINE L1 5645 5951 -219 180 0 0 0 chr2 13043141 13043161 -240213422 + (TTAA)n Simple_repeat Simple_repeat 2 21 0 772 293 67 62 chr2 13043190 13043791 -240212792 - L2 LINE L2 0 3313 2723 180 174 0 87 chr2 13044402 13044448 -240212135 - MIR SINE MIR -10 252 211 1395 201 119 49 chr2 13046195 13046667 -240209916 - MLT1D LTR MaLR 0 505 1 435 282 28 93 chr2 13047056 13047347 -240209236 - L2 LINE L2 -79 3234 2963 230 288 76 30 chr2 13048370 13048436 -240208147 + L2 LINE L2 3197 3265 -48 313 350 21 21 chr2 13048975 13049118 -240207465 - MIR SINE MIR -100 162 20 204 260 57 8 chr2 13049645 13049737 -240206846 - MIR SINE MIR -62 146 52 2148 109 20 0 chr2 13049984 13050288 -240206295 + AluSp SINE Alu 1 310 -3 301 369 95 5 chr2 13050551 13050773 -240205810 + MIR SINE MIR 6 247 -15 289 351 16 16 chr2 13050966 13051208 -240205375 + L1MEc LINE L1 36 277 -6119 1955 125 4 0 chr2 13051609 13051881 -240204702 + AluSx SINE Alu 3 275 -37 235 0 0 54 chr2 13051885 13051922 -240204661 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 479 234 24 102 chr2 13052107 13052441 -240204142 + L1MEc LINE L1 825 1132 -5073 1331 150 87 113 chr2 13052662 13053122 -240203461 - LTR7 LTR ERV1 -2 448 1 2362 95 48 13 chr2 13053122 13053501 -240203082 - HERVH LTR ERV1 0 7713 7322 1391 123 18 14 chr2 13053499 13053718 -240202865 - HERVH LTR ERV1 -1894 5819 5600 * 2422 143 38 0 chr2 13053719 13054112 -240202471 - HERVH LTR ERV1 -2564 5149 4742 1138 137 16 0 chr2 13054161 13054351 -240202232 - HERVH LTR ERV1 -4726 2987 2795 * 1685 100 59 0 chr2 13054349 13054588 -240201995 - HERVH LTR ERV1 -2973 4740 4488 3239 122 8 6 chr2 13054590 13055091 -240201492 - HERVH LTR ERV1 -3720 3993 3492 947 133 7 0 chr2 13055081 13055231 -240201352 - HERVH LTR ERV1 -4423 3290 3140 * 19960 102 21 5 chr2 13055225 13058165 -240198418 - HERVH LTR ERV1 -4726 2987 1 1272 145 95 124 chr2 13058167 13058628 -240197955 - LTR7 LTR ERV1 -2 448 1 233 0 62 0 chr2 13059298 13059330 -240197253 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1399 244 7 3 chr2 13059613 13059908 -240196675 + MLT2B1 LTR ERVL 1 296 -224 191 236 214 22 chr2 13059990 13060079 -240196504 - MIR SINE MIR -85 177 72 3717 292 81 52 chr2 13061413 13063236 -240193347 - L1ME2 LINE L1 -304 6655 4887 255 100 183 0 chr2 13063236 13063296 -240193287 + LTR52 LTR ERVL 19 89 -332 3717 292 81 52 chr2 13063296 13064125 -240192458 - L1ME2 LINE L1 -2072 4887 4084 2187 210 92 76 chr2 13064125 13064938 -240191645 - LTR1B LTR ERV1 0 826 1 3717 292 81 52 chr2 13064938 13065413 -240191170 - L1ME2 LINE L1 -2875 4084 3624 1819 161 58 19 chr2 13065413 13065774 -240190809 - THE1C LTR MaLR 0 375 1 9246 131 38 40 chr2 13065774 13067357 -240189226 - THE1C-int LTR MaLR 0 1580 2 1914 140 80 11 chr2 13067358 13067709 -240188874 - THE1C LTR MaLR 0 375 1 3717 292 81 52 chr2 13067709 13068072 -240188511 - L1ME2 LINE L1 -3334 3625 2998 886 279 49 21 chr2 13068073 13068500 -240188083 - L1ME2 LINE L1 -4125 2997 2559 317 218 50 30 chr2 13068682 13068783 -240187800 - L1ME2 LINE L1 -5159 1264 1162 620 342 47 4 chr2 13069427 13069661 -240186922 - HERVL40 LTR ERVL -1738 3792 3549 428 303 60 60 chr2 13070905 13071219 -240185364 - REP3 LTR ERV -54 508 195 1299 271 86 14 chr2 13071674 13072172 -240184411 - MLT1E1 LTR MaLR -114 540 7 314 298 19 10 chr2 13072584 13072688 -240183895 + MIR3 SINE MIR 89 193 -15 325 360 30 35 chr2 13073571 13073771 -240182812 + MIR SINE MIR 49 247 -15 241 286 21 83 chr2 13073864 13074056 -240182527 - REP3 LTR ERV -218 344 165 630 345 84 35 chr2 13075350 13076054 -240180529 + HAL1b LINE L1 62 799 -549 255 392 40 8 chr2 13076288 13076413 -240180170 + MER5A DNA MER1_type 52 180 -9 848 231 0 0 chr2 13077017 13077177 -240179406 + AluJb SINE Alu 129 288 -24 1014 203 5 15 chr2 13078293 13078495 -240178088 - AluJo SINE Alu -19 293 94 207 279 81 45 chr2 13079567 13079678 -240176905 - L2 LINE L2 -151 3121 3007 366 42 0 0 chr2 13079746 13079794 -240176789 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 1364 48 0 0 chr2 13079806 13079973 -240176610 - L1PA4 LINE L1 -8 6147 5981 434 245 20 10 chr2 13080016 13080114 -240176469 - MER81 DNA DNA -1 113 15 754 232 80 77 chr2 13080143 13080505 -240176078 - MLT1F1 LTR MaLR -140 427 65 1793 155 3 23 chr2 13080735 13081038 -240175545 + AluSx SINE Alu 1 297 -15 22 0 0 0 chr2 13081193 13081215 -240175368 + AT_rich Low_complexity Low_complexity 1 22 0 1206 186 122 32 chr2 13081634 13081945 -240174638 - MER44D DNA MER2_type 0 609 1 590 243 59 76 chr2 13082150 13082487 -240174096 + MER57A LTR ERV1 103 403 0 244 300 0 0 chr2 13082817 13082887 -240173696 - MIR SINE MIR -114 148 79 224 291 78 15 chr2 13083742 13083865 -240172718 - MIR SINE MIR -63 145 34 22 56 0 0 chr2 13084489 13084525 -240172058 + AT_rich Low_complexity Low_complexity 1 36 0 207 0 0 0 chr2 13085019 13085042 -240171541 + (TG)n Simple_repeat Simple_repeat 2 24 0 190 372 64 0 chr2 13085902 13085996 -240170587 + L2 LINE L2 2175 2274 -1040 1432 108 78 13 chr2 13086126 13086358 -240170225 - L1PA13 LINE L1 -3 6160 5914 212 197 0 30 chr2 13087735 13087801 -240168782 + (TGAA)n Simple_repeat Simple_repeat 2 65 0 431 293 98 76 chr2 13089988 13090437 -240166146 + L1ME LINE L1 536 1015 -5055 1929 161 16 16 chr2 13090437 13090810 -240165773 - THE1C LTR MaLR -2 373 1 431 293 98 76 chr2 13090810 13090946 -240165637 + L1ME LINE L1 1015 1146 -4924 2188 113 0 10 chr2 13091350 13091660 -240164923 + AluSx SINE Alu 1 307 -5 496 242 11 68 chr2 13091750 13091940 -240164643 + L1MA9 LINE L1 6093 6271 -41 226 309 72 28 chr2 13092052 13092233 -240164350 + L1ME LINE L1 2312 2500 -3580 920 140 7 33 chr2 13092262 13092412 -240164171 + Tigger3(Golem) DNA MER2_type 2886 3031 0 1034 292 71 38 chr2 13092421 13093263 -240163320 - L1M4 LINE L1 -778 5368 4499 340 301 99 40 chr2 13093305 13093710 -240162873 - L1M4 LINE L1 -1838 4308 3880 2400 117 96 0 chr2 13093741 13094125 -240162458 + MSTA LTR MaLR 1 421 -7 8824 178 36 13 chr2 13094133 13095556 -240161027 + MSTA-int LTR MaLR 2 1469 -182 1993 129 0 7 chr2 13095556 13095879 -240160704 + AluSx SINE Alu 1 321 0 8824 178 36 13 chr2 13095879 13096062 -240160521 + MSTA-int LTR MaLR 1469 1646 -5 1873 157 144 5 chr2 13096068 13096443 -240160140 + MSTA LTR MaLR 1 427 -1 251 276 43 26 chr2 13096655 13096771 -240159812 - L1M4 LINE L1 -2532 3614 3497 245 330 18 18 chr2 13096919 13097028 -240159555 - MER81 DNA DNA -5 109 1 22 0 0 0 chr2 13097140 13097162 -240159421 + AT_rich Low_complexity Low_complexity 1 22 0 227 309 41 0 chr2 13097296 13097393 -240159190 + HAL1b LINE L1 261 361 -987 374 300 122 15 chr2 13097407 13097677 -240158906 + L1ME4a LINE L1 4549 4847 -1299 1068 267 92 101 chr2 13097744 13098984 -240157599 + L1MC4 LINE L1 6809 8037 -5 372 287 38 73 chr2 13099176 13099389 -240157194 + L1ME4a LINE L1 5629 5829 -333 12729 150 59 4 chr2 13099389 13101682 -240154901 + Tigger1 DNA MER2_type 1 2418 0 372 287 38 73 chr2 13101682 13101785 -240154798 + L1ME4a LINE L1 5829 5934 -228 772 273 64 93 chr2 13102027 13102673 -240153910 + MLT1G LTR MaLR 4 590 0 2124 142 14 19 chr2 13103034 13103400 -240153183 - THE1B LTR MaLR 0 364 1 11089 112 10 2 chr2 13103402 13104964 -240151619 - THE1B-int LTR MaLR -5 1575 1 2166 148 3 27 chr2 13104964 13105337 -240151246 - THE1B LTR MaLR 0 364 1 31 88 0 0 chr2 13105528 13105608 -240150975 + AT_rich Low_complexity Low_complexity 1 80 0 31 0 0 0 chr2 13105702 13105733 -240150850 + AT_rich Low_complexity Low_complexity 1 31 0 243 277 39 23 chr2 13105872 13106002 -240150581 + L1ME4a LINE L1 5969 6100 -21 1523 143 4 4 chr2 13106064 13106316 -240150267 - AluSq SINE Alu 0 307 56 483 309 43 35 chr2 13106440 13106696 -240149887 - MIR SINE MIR 0 262 5 246 291 93 23 chr2 13106703 13106789 -240149794 + L2 LINE L2 3220 3311 -2 1929 172 48 54 chr2 13107554 13108195 -240148388 + Tigger3(Golem) DNA MER2_type 1 3027 -2 327 96 0 0 chr2 13109500 13109552 -240147031 + (CA)n Simple_repeat Simple_repeat 2 53 0 413 328 95 12 chr2 13109743 13109984 -240146599 + MIR SINE MIR 2 262 0 198 0 0 0 chr2 13112278 13112300 -240144283 + (T)n Simple_repeat Simple_repeat 1 22 0 198 0 0 0 chr2 13113319 13113341 -240143242 + (T)n Simple_repeat Simple_repeat 1 22 0 417 54 0 0 chr2 13113914 13113970 -240142613 + (CA)n Simple_repeat Simple_repeat 2 57 0 437 275 30 8 chr2 13114022 13114153 -240142430 + MIR SINE MIR 11 144 -118 569 81 79 3 chr2 13114969 13115293 -240141290 + (TA)n Simple_repeat Simple_repeat 1 348 0 234 346 13 13 chr2 13116331 13116409 -240140174 - MER5A DNA MER1_type -104 85 8 229 0 83 0 chr2 13116960 13116996 -240139587 + T-rich Low_complexity Low_complexity 2 40 0 909 166 0 0 chr2 13116998 13117143 -240139440 - AluJb SINE Alu -31 281 137 274 254 0 17 chr2 13117148 13117207 -240139376 - AluS SINE Alu -239 61 4 624 14 0 0 chr2 13117387 13117460 -240139123 + (CA)n Simple_repeat Simple_repeat 1 73 0 1464 218 124 47 chr2 13117506 13118230 -240138353 - LTR1B LTR ERV1 0 826 7 553 333 27 18 chr2 13119043 13119268 -240137315 + MIR SINE MIR 8 234 -28 187 371 82 44 chr2 13119898 13120192 -240136391 - L2 LINE L2 -607 2707 2403 188 135 27 0 chr2 13120763 13120800 -240135783 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 317 269 70 39 chr2 13121122 13121278 -240135305 - L1MC4a LINE L1 -1878 5930 5770 310 224 41 15 chr2 13121560 13121759 -240134824 + L1ME LINE L1 5265 5505 -661 476 281 27 32 chr2 13121759 13121980 -240134603 + L1MC4 LINE L1 6824 7043 -999 2084 84 29 3 chr2 13122251 13122561 -240134022 + L1PA13 LINE L1 5846 6163 0 612 234 122 70 chr2 13122654 13123020 -240133563 + MLT1D LTR MaLR 27 419 -48 409 261 141 29 chr2 13123223 13123529 -240133054 + L1M4 LINE L1 3635 3974 -2172 382 22 0 0 chr2 13124190 13124236 -240132347 - MADE1 DNA Mariner -34 46 1 331 315 82 14 chr2 13124285 13124431 -240132152 - MLT1K LTR MaLR -371 217 62 289 298 36 41 chr2 13125049 13125172 -240131411 - MIR SINE MIR -37 171 49 553 289 0 0 chr2 13125176 13125304 -240131279 - Tigger1 DNA MER2_type 0 2418 2291 3650 150 38 42 chr2 13125405 13125699 -240130884 - Tigger1 DNA MER2_type -671 1747 1453 7226 33 0 0 chr2 13125699 13126906 -240129677 - L1PA4 LINE L1 -1 6154 4989 3650 150 38 42 chr2 13126906 13127263 -240129320 - Tigger1 DNA MER2_type -965 1453 1097 2398 122 14 3 chr2 13127263 13127623 -240128960 - THE1B LTR MaLR 0 364 1 3650 150 38 42 chr2 13127623 13127652 -240128931 - Tigger1 DNA MER2_type -1321 1097 1069 3692 110 30 11 chr2 13127660 13128172 -240128411 - L1PA11 LINE L1 0 6174 5648 2106 142 19 27 chr2 13128172 13128539 -240128044 - THE1B LTR MaLR 0 364 1 3692 110 30 11 chr2 13128539 13128597 -240127986 - L1PA11 LINE L1 -526 5648 5593 4738 180 46 8 chr2 13128597 13129481 -240127102 - Tigger1 DNA MER2_type -1500 918 1 217 219 0 0 chr2 13129791 13129832 -240126751 + (TG)n Simple_repeat Simple_repeat 2 42 0 25 0 0 0 chr2 13130115 13130140 -240126443 + AT_rich Low_complexity Low_complexity 1 25 0 313 228 13 0 chr2 13131659 13131738 -240124845 - MER116 DNA Mariner 0 80 1 415 277 66 52 chr2 13132717 13132964 -240123619 + MIR SINE MIR 5 249 -13 341 286 16 87 chr2 13133375 13133560 -240123023 + MIR SINE MIR 49 220 -42 202 301 30 66 chr2 13133750 13133916 -240122667 - L2 LINE L2 -44 3269 3110 386 234 43 58 chr2 13134065 13134253 -240122330 - MER53 DNA DNA -3 186 2 336 303 38 54 chr2 13134271 13134456 -240122127 + MIR3 SINE MIR 15 196 -12 2229 105 0 7 chr2 13134621 13134927 -240121656 - AluSx SINE Alu -8 304 1 22 0 0 0 chr2 13135143 13135165 -240121418 + AT_rich Low_complexity Low_complexity 1 22 0 987 260 110 7 chr2 13136156 13136456 -240120127 + MER58B DNA MER1_type 11 341 0 260 342 140 0 chr2 13137183 13137297 -240119286 - MIR SINE MIR -118 144 15 2180 260 112 27 chr2 13138449 13140785 -240115798 - L1ME1 LINE L1 -64 6913 4323 300 262 43 43 chr2 13140870 13141034 -240115549 - L1ME1 LINE L1 -2744 4213 4050 343 293 137 51 chr2 13141134 13141390 -240115193 - L1ME1 LINE L1 -6563 296 19 327 366 58 25 chr2 13141786 13142062 -240114521 + MLT1J LTR MaLR 97 381 -130 686 297 20 60 chr2 13143201 13143450 -240113133 + MIR SINE MIR 3 241 -21 279 0 0 0 chr2 13143853 13143884 -240112699 + (CA)n Simple_repeat Simple_repeat 1 31 0 21 36 0 0 chr2 13144817 13144845 -240111738 + AT_rich Low_complexity Low_complexity 1 28 0 227 386 96 56 chr2 13145150 13145474 -240111109 + L2 LINE L2 2917 3253 -19 303 333 200 21 chr2 13145772 13146012 -240110571 + L3 LINE CR1 1246 1528 -49 4651 194 93 17 chr2 13146833 13148183 -240108400 - L1MC1 LINE L1 -14 6319 4865 187 150 33 0 chr2 13148191 13148251 -240108332 + (TA)n Simple_repeat Simple_repeat 1 62 0 258 122 0 0 chr2 13148254 13148295 -240108288 - Alu SINE Alu -12 290 250 41 48 0 0 chr2 13148295 13148357 -240108226 + AT_rich Low_complexity Low_complexity 1 62 0 585 234 7 13 chr2 13148378 13148532 -240108051 - L1MC1 LINE L1 -1304 4842 4690 201 359 0 26 chr2 13148812 13148929 -240107654 + CT-rich Low_complexity Low_complexity 3 116 0 636 335 72 3 chr2 13149000 13149307 -240107276 + LTR16A LTR ERVL 123 450 0 1962 326 57 23 chr2 13149402 13150406 -240106177 + HERV16 LTR ERVL 114 1151 -3845 819 295 36 13 chr2 13150453 13150758 -240105825 + L1MEc LINE L1 108 419 -5977 346 319 22 0 chr2 13150816 13150951 -240105632 + L1MEc LINE L1 1936 2073 -4323 423 293 140 22 chr2 13151542 13151764 -240104819 + MIR SINE MIR 5 252 -10 25 0 0 0 chr2 13152182 13152207 -240104376 + AT_rich Low_complexity Low_complexity 1 25 0 401 234 22 135 chr2 13152245 13152557 -240104026 + L1MC4 LINE L1 7763 8039 -3 711 288 29 4 chr2 13153240 13153518 -240103065 - L1MEc LINE L1 -5487 909 625 607 342 27 45 chr2 13153539 13153913 -240102670 - L1MEc LINE L1 -5992 404 38 604 309 141 49 chr2 13153920 13154367 -240102216 + L2 LINE L2 2108 2595 -719 380 343 131 21 chr2 13154369 13154915 -240101668 + L2 LINE L2 2707 3313 0 2273 81 7 3 chr2 13154991 13155287 -240101296 + AluSq SINE Alu 1 297 -16 258 32 0 0 chr2 13155293 13155324 -240101259 + (TA)n Simple_repeat Simple_repeat 2 32 0 36 0 0 0 chr2 13155506 13155542 -240101041 + AT_rich Low_complexity Low_complexity 1 36 0 2954 170 113 0 chr2 13155553 13156154 -240100429 + LTR51 LTR ERV1 3 671 0 2091 167 5 11 chr2 13156786 13157163 -240099420 + THE1C LTR MaLR 1 375 0 357 287 85 8 chr2 13157293 13157422 -240099161 + MIR SINE MIR 110 248 -14 315 0 0 0 chr2 13157432 13157467 -240099116 + (TG)n Simple_repeat Simple_repeat 2 36 0 341 277 34 8 chr2 13157846 13157965 -240098618 - L2 LINE L2 0 3313 3192 21 0 0 0 chr2 13158148 13158169 -240098414 + AT_rich Low_complexity Low_complexity 1 21 0 241 316 165 8 chr2 13159379 13159512 -240097071 - L2 LINE L2 0 3313 3160 2018 249 55 32 chr2 13159530 13160766 -240095817 - L1ME2 LINE L1 -169 5995 4735 212 57 0 29 chr2 13160838 13160873 -240095710 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 13492 26 2 1 chr2 13160873 13163221 -240093362 - L1PA3 LINE L1 -24 6131 3782 938 267 62 31 chr2 13163226 13163514 -240093069 - MLT1E LTR MaLR -296 297 1 25 0 0 0 chr2 13163788 13163813 -240092770 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr2 13163830 13163859 -240092724 + AT_rich Low_complexity Low_complexity 1 29 0 279 0 0 0 chr2 13164791 13164822 -240091761 + (CA)n Simple_repeat Simple_repeat 2 32 0 438 79 0 0 chr2 13165039 13165102 -240091481 + (TG)n Simple_repeat Simple_repeat 2 64 0 1606 204 28 6 chr2 13165111 13165468 -240091115 - MLT1A1 LTR MaLR 0 365 1 1776 167 10 10 chr2 13166796 13167108 -240089475 - AluJo SINE Alu 0 312 1 485 243 0 0 chr2 13167374 13167485 -240089098 - L1MA9 LINE L1 -24 6288 6178 222 327 89 23 chr2 13168122 13168336 -240088247 - L2 LINE L2 -385 2929 2702 672 231 0 0 chr2 13168758 13168892 -240087691 + AluJo SINE Alu 1 134 -178 404 317 96 46 chr2 13169100 13169403 -240087180 - HERV16 LTR ERVL -4064 932 615 2275 104 0 0 chr2 13169437 13169744 -240086839 - AluSx SINE Alu -5 307 1 623 305 98 50 chr2 13170274 13170671 -240085912 - LTR16A LTR ERVL -4 446 31 22 56 0 0 chr2 13170816 13170852 -240085731 + AT_rich Low_complexity Low_complexity 1 36 0 975 140 6 12 chr2 13171255 13171419 -240085164 + L1PA10 LINE L1 6006 6168 0 292 378 55 8 chr2 13171933 13172060 -240084523 - L2 LINE L2 -22 3250 3118 27 29 0 0 chr2 13172701 13172735 -240083848 + AT_rich Low_complexity Low_complexity 1 34 0 582 297 18 32 chr2 13172850 13173069 -240083514 + L2 LINE L2 2270 2485 -829 2610 186 38 39 chr2 13174534 13175169 -240081414 - LTR27 LTR ERV1 0 636 3 307 364 91 0 chr2 13175245 13175410 -240081173 + MIR SINE MIR 9 188 -74 180 283 21 103 chr2 13176185 13176330 -240080253 + L2 LINE L2 3171 3303 -10 32 57 0 0 chr2 13176654 13176707 -240079876 + AT_rich Low_complexity Low_complexity 1 53 0 21 57 0 0 chr2 13176819 13176854 -240079729 + AT_rich Low_complexity Low_complexity 1 35 0 430 190 17 0 chr2 13176876 13176992 -240079591 + (TA)n Simple_repeat Simple_repeat 1 118 0 23 0 0 0 chr2 13177248 13177271 -240079312 + AT_rich Low_complexity Low_complexity 1 23 0 314 45 23 0 chr2 13177356 13177400 -240079183 + (CA)n Simple_repeat Simple_repeat 2 46 0 589 294 24 48 chr2 13177558 13177888 -240078695 - MER90 LTR ERV1 0 575 254 750 166 13 0 chr2 13177888 13178102 -240078481 - L1P LINE L1 -743 5403 5203 180 0 0 0 chr2 13178102 13178122 -240078461 + (TC)n Simple_repeat Simple_repeat 1 20 0 1008 124 0 0 chr2 13178123 13178301 -240078282 + (TA)n Simple_repeat Simple_repeat 2 179 0 389 198 0 62 chr2 13178333 13178429 -240078154 - L1MC4 LINE L1 -1339 6703 6614 2589 221 7 5 chr2 13178458 13179055 -240077528 - L1P LINE L1 -970 5176 4579 4001 175 16 1 chr2 13179056 13179792 -240076791 + L1PA16 LINE L1 5411 6157 -9 180 152 0 0 chr2 13179838 13179871 -240076712 + (TG)n Simple_repeat Simple_repeat 2 34 0 1036 246 33 30 chr2 13179981 13180282 -240076301 - MER90 LTR ERV1 -311 303 2 252 235 62 37 chr2 13180597 13180678 -240075905 - MER21B LTR ERV1 -271 592 510 1152 132 3 11 chr2 13180785 13181740 -240074843 - HSATII Satellite Satellite 0 947 1 879 130 24 21 chr2 13181756 13182160 -240074423 - HSATII Satellite Satellite -63 404 1 24 0 0 0 chr2 13182390 13182414 -240074169 + AT_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr2 13182529 13182564 -240074019 + AT_rich Low_complexity Low_complexity 1 35 0 430 190 17 0 chr2 13182586 13182702 -240073881 + (TA)n Simple_repeat Simple_repeat 1 118 0 314 45 23 0 chr2 13183066 13183110 -240073473 + (CA)n Simple_repeat Simple_repeat 2 46 0 654 226 31 0 chr2 13184554 13184705 -240071878 + MLT1B LTR MaLR 3 158 -232 1181 159 50 43 chr2 13184705 13184963 -240071620 - THE1C LTR MaLR 0 375 116 1017 122 6 9 chr2 13185087 13186163 -240070420 - HSATII Satellite Satellite -40 1072 1 1000 102 14 21 chr2 13186194 13186612 -240069971 - HSATII Satellite Satellite 0 415 1 1002 128 14 15 chr2 13186638 13187882 -240068701 - HSATII Satellite Satellite 0 1243 1 473 303 48 5 chr2 13187997 13188185 -240068398 + MLT1C LTR MaLR 208 403 -64 221 167 21 0 chr2 13188203 13188251 -240068332 + MER5C DNA MER1_type 270 318 -6 368 291 119 8 chr2 13188726 13188860 -240067723 - MIR SINE MIR -99 163 15 372 125 0 0 chr2 13189690 13189754 -240066829 - HSATII Satellite Satellite -106 64 1 1172 118 8 10 chr2 13189779 13191729 -240064854 - HSATII Satellite Satellite -1 1946 1 1248 116 11 3 chr2 13191744 13192599 -240063984 - HSATII Satellite Satellite -99 861 1 958 121 16 18 chr2 13192630 13194010 -240062573 - HSATII Satellite Satellite -5 1376 1 1131 122 8 8 chr2 13194030 13196385 -240060198 - HSATII Satellite Satellite 0 2354 1 888 139 14 8 chr2 13196508 13197691 -240058892 - HSATII Satellite Satellite -22 1189 1 1001 122 4 12 chr2 13197818 13198908 -240057675 - HSATII Satellite Satellite -1 1080 1 975 108 18 25 chr2 13198943 13199650 -240056933 - HSATII Satellite Satellite -1 701 1 628 320 61 16 chr2 13200123 13200370 -240056213 + MIR SINE MIR 2 259 -3 458 319 94 19 chr2 13200874 13201341 -240055242 - L1MCa LINE L1 -5145 1281 780 346 365 7 34 chr2 13201663 13201811 -240054772 + MIR SINE MIR 29 172 -90 253 330 50 10 chr2 13202805 13202905 -240053678 - MIR SINE MIR -111 151 48 333 23 0 0 chr2 13203561 13203605 -240052978 - L1PA3 LINE L1 0 6155 6112 197 328 86 26 chr2 13203629 13203745 -240052838 + MIR SINE MIR 20 142 -66 853 271 18 5 chr2 13203798 13204019 -240052564 + MER58A DNA MER1_type 1 224 0 335 233 0 0 chr2 13204031 13204104 -240052479 - MIR SINE MIR -67 195 123 1828 153 19 0 chr2 13204204 13204512 -240052071 - THE1C-int LTR MaLR -1264 316 3 1739 188 32 24 chr2 13204514 13204886 -240051697 - THE1C LTR MaLR 0 375 1 5300 130 33 17 chr2 13204887 13205938 -240050645 + L1M1 LINE L1 2696 3763 -3802 262 207 0 37 chr2 13205938 13206020 -240050563 + (TA)n Simple_repeat Simple_repeat 1 79 0 180 395 37 12 chr2 13206337 13206418 -240050165 + L2 LINE L2 3168 3250 -22 22 0 0 0 chr2 13207016 13207038 -240049545 + AT_rich Low_complexity Low_complexity 1 22 0 219 36 0 0 chr2 13207363 13207391 -240049192 + (TA)n Simple_repeat Simple_repeat 2 29 0 21 0 0 0 chr2 13207958 13207979 -240048604 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 13208641 13208666 -240047917 + AT_rich Low_complexity Low_complexity 1 25 0 220 364 57 0 chr2 13208838 13208926 -240047657 + L2 LINE L2 3171 3263 -9 10418 186 25 10 chr2 13209179 13211125 -240045458 + L1M1 LINE L1 725 2698 -4867 1857 155 41 30 chr2 13211126 13211493 -240045090 - THE1C LTR MaLR -2 373 3 2594 113 0 13 chr2 13211495 13211875 -240044708 - THE1C-int LTR MaLR 0 1580 1206 356 306 57 8 chr2 13212354 13212478 -240044105 + L2 LINE L2 3141 3270 -2 279 0 0 0 chr2 13213318 13213349 -240043234 + (CA)n Simple_repeat Simple_repeat 2 32 0 219 299 15 15 chr2 13213585 13213652 -240042931 - L2 LINE L2 -5 3308 3242 289 402 26 39 chr2 13214143 13214377 -240042206 - L2 LINE L2 -556 2758 2528 1080 224 55 22 chr2 13215168 13215440 -240041143 - MLT2D LTR ERVL -133 281 1 220 312 64 48 chr2 13216558 13216683 -240039900 - MIR SINE MIR -71 191 65 220 125 18 18 chr2 13216732 13216788 -240039795 + (TA)n Simple_repeat Simple_repeat 2 57 0 1297 212 0 60 chr2 13216803 13217105 -240039478 - AluJb SINE Alu -28 284 1 881 338 65 32 chr2 13217518 13218116 -240038467 - ERVL LTR ERVL -1050 4714 4097 227 58 87 51 chr2 13218246 13218384 -240038199 + (TA)n Simple_repeat Simple_repeat 1 143 0 422 52 31 94 chr2 13218398 13218590 -240037993 + (TA)n Simple_repeat Simple_repeat 1 180 0 254 284 0 0 chr2 13218598 13218686 -240037897 + L1MC4 LINE L1 6616 6703 -1339 235 283 0 22 chr2 13218660 13218752 -240037831 - L1MC4 LINE L1 -1339 6703 6614 * 198 209 0 0 chr2 13218752 13218795 -240037788 + (TA)n Simple_repeat Simple_repeat 2 44 0 227 337 0 0 chr2 13218796 13218885 -240037698 - L1MC4 LINE L1 -1339 6703 6615 219 139 0 0 chr2 13218888 13218924 -240037659 + (TATATG)n Simple_repeat Simple_repeat 1 36 0 317 315 0 0 chr2 13218924 13219013 -240037570 + L1MC4 LINE L1 6615 6703 -1339 311 297 11 0 chr2 13218933 13219024 -240037559 - L1MC4 LINE L1 -1339 6703 6612 * 265 34 85 0 chr2 13219062 13219121 -240037462 + (ATATG)n Simple_repeat Simple_repeat 1 64 0 291 151 40 40 chr2 13219208 13219360 -240037223 + (TA)n Simple_repeat Simple_repeat 2 153 0 5586 223 38 31 chr2 13219365 13220167 -240036416 + L1 LINE L1 2341 3136 -3010 5502 68 3 9 chr2 13220167 13220901 -240035682 + L1PA8 LINE L1 5437 6172 0 5586 223 38 31 chr2 13220901 13222264 -240034319 + L1 LINE L1 3136 4437 -1709 357 135 0 124 chr2 13222726 13222815 -240033768 - MADE1 DNA Mariner 0 80 3 1845 146 0 64 chr2 13223328 13223657 -240032926 - AluSx SINE Alu -2 310 3 25 51 0 0 chr2 13223797 13223836 -240032747 + AT_rich Low_complexity Low_complexity 1 39 0 27 0 0 0 chr2 13223929 13223956 -240032627 + AT_rich Low_complexity Low_complexity 1 27 0 208 260 90 10 chr2 13224942 13225042 -240031541 + MIR3 SINE MIR 98 205 -3 1586 166 3 46 chr2 13225088 13225390 -240031193 + AluJo SINE Alu 7 295 -17 1665 172 33 44 chr2 13225661 13226027 -240030556 - THE1C LTR MaLR 0 375 14 815 243 80 24 chr2 13226153 13226528 -240030055 - MER114 LTR ERV -30 618 223 2410 129 18 36 chr2 13226670 13227113 -240029470 + L1MA2 LINE L1 5859 6293 -11 29 0 0 0 chr2 13227117 13227146 -240029437 + AT_rich Low_complexity Low_complexity 1 29 0 3843 247 59 21 chr2 13227159 13229201 -240027382 - L1MC/D LINE L1 -743 5403 3684 5056 156 50 4 chr2 13229203 13230118 -240026465 - L1MA7 LINE L1 -1 6290 5334 1299 176 88 6 chr2 13230112 13230430 -240026153 + L1MA3 LINE L1 4121 4464 -1682 * 644 184 37 18 chr2 13231246 13231409 -240025174 - L1MA8 LINE L1 -10 6281 6116 22 35 0 0 chr2 13232334 13232363 -240024220 + AT_rich Low_complexity Low_complexity 1 29 0 4085 207 15 15 chr2 13232942 13233744 -240022839 + L1PA16 LINE L1 12 813 -6752 * 5641 152 22 4 chr2 13233741 13235058 -240021525 + L1MA3 LINE L1 4788 6153 -152 5126 179 41 7 chr2 13235488 13237467 -240019116 + L1PA16 LINE L1 5544 7584 -1 254 310 26 0 chr2 13237538 13237651 -240018932 - L2 LINE L2 -630 2684 2569 497 276 41 14 chr2 13238142 13238287 -240018296 + L2 LINE L2 3165 3313 0 423 0 0 0 chr2 13239445 13239492 -240017091 + (TATAA)n Simple_repeat Simple_repeat 3 49 0 463 11 55 83 chr2 13239549 13239919 -240016664 + (TA)n Simple_repeat Simple_repeat 1 359 0 412 198 40 34 chr2 13239923 13240100 -240016483 + (TATAA)n Simple_repeat Simple_repeat 2 179 0 2527 233 44 16 chr2 13241439 13242173 -240014410 - L1M4 LINE L1 -1212 5328 4575 1291 259 94 23 chr2 13242288 13243135 -240013448 - L1MDa LINE L1 -3235 3305 2394 353 265 82 55 chr2 13243450 13243861 -240012722 - L1M4 LINE L1 -1664 4482 4059 5603 162 22 9 chr2 13244070 13245305 -240011278 - L1MA7 LINE L1 0 6291 5039 1220 188 4 0 chr2 13245277 13245506 -240011077 - L1P LINE L1 -1465 4681 4452 * 2552 40 7 3 chr2 13247633 13247937 -240008646 - AluY SINE Alu -6 305 1 199 307 134 29 chr2 13248312 13248550 -240008033 - L3 LINE CR1 -177 1400 1138 238 274 137 42 chr2 13249041 13249209 -240007374 + MIR SINE MIR 53 236 -26 243 327 13 61 chr2 13249819 13249985 -240006598 + MIR SINE MIR 50 206 -56 279 79 0 0 chr2 13250249 13250287 -240006296 + (CA)n Simple_repeat Simple_repeat 2 39 0 894 305 4 0 chr2 13250292 13250525 -240006058 + L1ME1 LINE L1 108 341 -6055 618 189 30 0 chr2 13250553 13250685 -240005898 + L1MB2 LINE L1 5666 5801 -382 67 55 0 0 chr2 13250686 13250795 -240005788 + AT_rich Low_complexity Low_complexity 1 109 0 1387 153 38 103 chr2 13250798 13251224 -240005359 + L1MB2 LINE L1 5783 6180 -3 3291 256 66 51 chr2 13251382 13253612 -240002971 + L1ME1 LINE L1 3971 6230 -5 488 282 134 32 chr2 13254817 13255406 -240001177 + L1M4 LINE L1 3713 4361 -1785 236 278 43 49 chr2 13255419 13255581 -240001002 + L1M4 LINE L1 4688 4848 -1298 29 70 0 0 chr2 13255673 13255730 -240000853 + AT_rich Low_complexity Low_complexity 1 57 0 5882 94 15 70 chr2 13255792 13256774 -239999809 - L1PA13 LINE L1 -5 6158 5250 1695 195 0 3 chr2 13256774 13257087 -239999496 - AluSx SINE Alu 0 312 1 5882 94 15 70 chr2 13257087 13257656 -239998927 - L1PA13 LINE L1 -913 5250 4651 231 343 39 6 chr2 13257970 13258148 -239998435 + L1ME LINE L1 4745 4928 -1218 582 246 88 36 chr2 13258466 13258771 -239997812 + L1ME LINE L1 5301 5621 -549 363 283 40 52 chr2 13259288 13259461 -239997122 - HERV16 LTR ERVL -959 4805 4635 1717 197 18 91 chr2 13259494 13259802 -239996781 + MER31B LTR ERV1 5 265 -201 2056 120 55 0 chr2 13259802 13260094 -239996489 - AluSg SINE Alu -2 308 1 1717 197 18 91 chr2 13260094 13260282 -239996301 + MER31B LTR ERV1 265 465 -1 276 105 0 0 chr2 13261082 13261120 -239995463 - L1MC3 LINE L1 -1305 6480 6443 24 0 0 0 chr2 13261197 13261221 -239995362 + AT_rich Low_complexity Low_complexity 1 24 0 258 286 178 16 chr2 13261570 13261755 -239994828 + HAL1b LINE L1 339 553 -795 295 307 80 27 chr2 13262447 13262597 -239993986 + MIR SINE MIR 68 225 -37 1496 323 55 25 chr2 13262775 13263316 -239993267 - HERV16 LTR ERVL -2023 2973 2450 264 59 0 0 chr2 13263316 13263350 -239993233 + (TG)n Simple_repeat Simple_repeat 1 34 0 1496 323 55 25 chr2 13263350 13264647 -239991936 - HERV16 LTR ERVL -2546 2450 962 1892 300 81 28 chr2 13264725 13265526 -239991057 - HERV16 LTR ERVL -4150 846 3 860 249 56 56 chr2 13265588 13265962 -239990621 - MLT1A2 LTR MaLR 0 374 1 281 288 0 0 chr2 13266038 13266104 -239990479 - LTR16A LTR ERVL -321 129 64 731 312 38 16 chr2 13266134 13266448 -239990135 + LTR16A LTR ERVL 120 440 -10 31 44 0 0 chr2 13266472 13266517 -239990066 + AT_rich Low_complexity Low_complexity 1 45 0 369 140 11 65 chr2 13266540 13266633 -239989950 + L1MA5 LINE L1 6213 6300 0 21 36 0 0 chr2 13267104 13267132 -239989451 + AT_rich Low_complexity Low_complexity 1 28 0 543 304 71 29 chr2 13267430 13267670 -239988913 + MIR SINE MIR 2 251 -11 199 398 34 0 chr2 13267891 13267979 -239988604 - MIR SINE MIR -112 150 60 180 0 0 0 chr2 13268783 13268803 -239987780 + (TTG)n Simple_repeat Simple_repeat 2 21 0 325 261 80 0 chr2 13269891 13269979 -239986604 - L1MC4 LINE L1 -1334 6708 6614 228 71 0 0 chr2 13270007 13270049 -239986534 + LTR66 LTR ERVL 398 439 -171 23341 177 22 22 chr2 13270792 13271509 -239985074 + L1PA10 LINE L1 1 716 -5767 192 40 0 0 chr2 13271509 13271534 -239985049 + (CACAG)n Simple_repeat Simple_repeat 1 25 0 23341 177 22 22 chr2 13271534 13277260 -239979323 + L1PA10 LINE L1 716 6471 -12 233 241 18 62 chr2 13277284 13277396 -239979187 - MER53 DNA DNA -12 177 71 3758 133 45 74 chr2 13277425 13278751 -239977832 + pTR5 LTR ERV1 168 2295 -143 250 307 9 163 chr2 13279370 13279585 -239976998 - MER91A DNA MER1_type -1 195 14 228 86 0 0 chr2 13279740 13279775 -239976808 + (CA)n Simple_repeat Simple_repeat 2 36 0 2214 114 0 0 chr2 13279814 13280113 -239976470 - AluSx SINE Alu -11 301 3 951 378 17 19 chr2 13282057 13282644 -239973939 + L1PA16 LINE L1 788 1373 -6201 308 347 0 0 chr2 13282785 13282883 -239973700 + L1PA16 LINE L1 2085 2182 -5399 12018 223 61 13 chr2 13283189 13287398 -239969185 + L1PA16 LINE L1 2258 6769 -835 1468 181 51 40 chr2 13287398 13287769 -239968814 - THE1C LTR MaLR 0 375 1 12018 223 61 13 chr2 13287769 13288647 -239967936 + L1PA16 LINE L1 6769 7604 0 569 276 131 22 chr2 13289104 13289567 -239967016 - MLT1E1 LTR MaLR -1 653 5 270 295 74 66 chr2 13290155 13290296 -239966287 + HAL1 LINE L1 750 888 -1619 324 0 0 0 chr2 13290296 13290332 -239966251 + (TAA)n Simple_repeat Simple_repeat 2 37 0 270 295 74 66 chr2 13290332 13290556 -239966027 + HAL1 LINE L1 888 1118 -1389 468 251 151 59 chr2 13290616 13290974 -239965609 + HAL1b LINE L1 417 807 -541 2006 98 42 3 chr2 13291486 13291772 -239964811 - AluSx SINE Alu -13 299 3 678 171 17 0 chr2 13292899 13293016 -239963567 + FRAM SINE Alu 43 161 -15 4162 168 58 10 chr2 13294015 13294883 -239961700 + L1MC1 LINE L1 5425 6333 0 322 304 39 10 chr2 13295991 13296093 -239960490 + MIR SINE MIR 25 129 -79 359 326 21 14 chr2 13296344 13296485 -239960098 - MLT-int LTR MaLR -1212 523 382 376 195 33 60 chr2 13296687 13296822 -239959761 - MLT1H1 LTR MaLR -24 531 423 274 296 42 78 chr2 13297009 13297206 -239959377 - MLT1H1 LTR MaLR -361 194 1 1030 147 0 43 chr2 13297353 13297537 -239959046 - Tigger2a DNA MER2_type -258 176 1 385 298 62 57 chr2 13297559 13299251 -239957332 + L1ME3A LINE L1 3780 5544 -620 3995 195 53 20 chr2 13299252 13300491 -239956092 + L1MB4 LINE L1 4903 6180 0 315 264 124 0 chr2 13300526 13300647 -239955936 + L1ME3A LINE L1 5561 5696 -474 455 276 103 5 chr2 13300666 13300880 -239955703 + L1ME3A LINE L1 5755 5989 -181 1722 179 30 0 chr2 13301569 13301865 -239954718 + AluJb SINE Alu 3 307 -5 2731 253 24 93 chr2 13301865 13303003 -239953580 - L1P LINE L1 -4028 2118 1060 * 3715 164 94 15 chr2 13302997 13303723 -239952860 + L1PA8 LINE L1 5390 6172 0 22 0 0 0 chr2 13303822 13303844 -239952739 + AT_rich Low_complexity Low_complexity 1 22 0 2015 131 0 10 chr2 13304011 13304302 -239952281 - AluSx SINE Alu -24 288 1 188 340 61 7 chr2 13305542 13305689 -239950894 + MIR SINE MIR 51 205 -57 30 83 0 0 chr2 13306442 13306514 -239950069 + AT_rich Low_complexity Low_complexity 1 72 0 1848 189 87 13 chr2 13356695 13357155 -239899428 + LTR54B LTR ERV1 1 494 -4 275 298 0 10 chr2 13357530 13357634 -239898949 + MER57-int LTR ERV1 389 491 -7046 436 86 0 12 chr2 13357713 13357790 -239898793 + L1PA3 LINE L1 5938 6009 -145 300 228 0 0 chr2 13358042 13358156 -239898427 + C-rich Low_complexity Low_complexity 1 114 0 268 289 9 18 chr2 13358332 13358446 -239898137 + MLT1H LTR MaLR 433 545 -4 340 308 30 8 chr2 13358449 13358582 -239898001 + MER69 DNA AcHobo 299 434 -792 1404 105 0 16 chr2 13358600 13358732 -239897851 + AluSg SINE Alu 3 133 -177 1828 140 19 51 chr2 13358732 13359046 -239897537 + AluSx SINE Alu 1 304 -8 1404 105 0 16 chr2 13359046 13359104 -239897479 + AluSg SINE Alu 133 190 -120 234 0 0 0 chr2 13359157 13359183 -239897400 + (GA)n Simple_repeat Simple_repeat 1 26 0 1735 267 86 41 chr2 13359193 13360137 -239896446 + L1MEc LINE L1 394 1379 -5017 250 292 67 19 chr2 13360350 13360559 -239896024 + L1MEc LINE L1 829 1047 -5349 2417 127 13 8 chr2 13360697 13361083 -239895500 - Harlequin LTR ERV1 -6508 388 1 1571 168 88 131 chr2 13361083 13361595 -239894988 - LTR2B LTR ERV1 0 490 1 413 222 76 41 chr2 13361805 13361976 -239894607 + L1M4 LINE L1 4744 4920 -1226 975 233 28 0 chr2 13362033 13362316 -239894267 + L1M4 LINE L1 5009 5299 -847 290 350 20 20 chr2 13362368 13362614 -239893969 + L1ME1 LINE L1 5898 6143 -23 25 65 0 0 chr2 13362615 13362661 -239893922 + AT_rich Low_complexity Low_complexity 1 46 0 21 0 0 0 chr2 13362674 13362695 -239893888 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 13362884 13362909 -239893674 + AT_rich Low_complexity Low_complexity 1 25 0 1514 257 92 54 chr2 13363247 13363411 -239893172 + L1ME1 LINE L1 4936 5092 -1074 273 75 0 0 chr2 13363411 13363451 -239893132 + (CA)n Simple_repeat Simple_repeat 1 40 0 1514 257 92 54 chr2 13363451 13363778 -239892805 + L1ME1 LINE L1 5092 5405 -761 1098 222 125 44 chr2 13363778 13364210 -239892373 - MLT1C LTR MaLR 0 467 1 1514 257 92 54 chr2 13364210 13364776 -239891807 + L1ME1 LINE L1 5405 6024 -142 1899 145 26 40 chr2 13365816 13366196 -239890387 + THE1C LTR MaLR 1 375 0 256 318 11 11 chr2 13367824 13367912 -239888671 + MIR SINE MIR 61 148 -114 252 316 105 0 chr2 13368096 13368191 -239888392 + MIR SINE MIR 126 230 -32 205 265 59 15 chr2 13368874 13368942 -239887641 + MER5B DNA MER1_type 5 75 -103 1572 106 0 55 chr2 13370128 13370364 -239886219 + AluSq SINE Alu 78 300 -13 1763 179 69 45 chr2 13370579 13370997 -239885586 - MSTC LTR MaLR 0 428 1 22 0 0 0 chr2 13371544 13371566 -239885017 + AT_rich Low_complexity Low_complexity 1 22 0 319 237 0 0 chr2 13371597 13371656 -239884927 + MER20 DNA MER1_type 1 59 -160 642 226 45 0 chr2 13371698 13371853 -239884730 + MER20 DNA MER1_type 55 216 -3 293 261 70 63 chr2 13371869 13372011 -239884572 - MIR SINE MIR -59 203 61 289 93 37 0 chr2 13372111 13372165 -239884418 + (TA)n Simple_repeat Simple_repeat 1 56 0 557 268 11 19 chr2 13372178 13372332 -239884251 - MLT2B1 LTR ERVL -96 424 228 1765 154 53 56 chr2 13372340 13372531 -239884052 - THE1C LTR MaLR 0 375 184 1665 151 102 37 chr2 13372531 13372883 -239883700 + THE1C LTR MaLR 1 375 0 1765 154 53 56 chr2 13372883 13373067 -239883516 - THE1C LTR MaLR -191 184 1 228 226 57 0 chr2 13373067 13373117 -239883466 - MLT2B1 LTR ERVL -288 232 180 484 176 88 0 chr2 13373402 13373504 -239883079 - MER20 DNA MER1_type -32 187 77 394 281 21 0 chr2 13373505 13373601 -239882982 - HERV16 LTR ERVL -4845 151 54 213 159 23 0 chr2 13374138 13374182 -239882401 + (TA)n Simple_repeat Simple_repeat 2 46 0 21 36 0 0 chr2 13375688 13375716 -239880867 + AT_rich Low_complexity Low_complexity 1 28 0 186 43 0 0 chr2 13375821 13375844 -239880739 + (TA)n Simple_repeat Simple_repeat 1 23 0 21 0 0 0 chr2 13375927 13375948 -239880635 + AT_rich Low_complexity Low_complexity 1 21 0 201 329 43 0 chr2 13376316 13376386 -239880197 + L2 LINE L2 3198 3270 -2 42 20 0 0 chr2 13376917 13376966 -239879617 + AT_rich Low_complexity Low_complexity 1 49 0 1678 210 71 14 chr2 13377680 13378104 -239878479 - L1MB4 LINE L1 -2 6178 5731 1111 78 1 106 chr2 13378108 13378307 -239878276 - L1PA11 LINE L1 -2 6172 5992 461 371 30 5 chr2 13378311 13378513 -239878070 + L2 LINE L2 1820 2026 -1288 653 186 8 8 chr2 13379861 13379985 -239876598 - L1MD2 LINE L1 -24 6335 6212 242 299 0 11 chr2 13380482 13380569 -239876014 - L1MEd LINE L1 -4871 1248 1163 1513 166 11 70 chr2 13380772 13381127 -239875456 - L1MA9 LINE L1 0 6312 5979 425 312 59 11 chr2 13381279 13381465 -239875118 + L2 LINE L2 3119 3313 0 407 129 100 0 chr2 13382993 13383063 -239873520 - MADE1 DNA Mariner -2 78 2 189 107 0 0 chr2 13383141 13383169 -239873414 + (TGAA)n Simple_repeat Simple_repeat 4 31 0 2167 95 0 0 chr2 13383201 13383505 -239873078 + L1PA13 LINE L1 5857 6160 -3 395 386 12 12 chr2 13383610 13383856 -239872727 + MIR SINE MIR 6 251 -11 203 295 0 16 chr2 13384927 13384988 -239871595 + (CATA)n Simple_repeat Simple_repeat 3 62 0 551 268 95 25 chr2 13385508 13385751 -239870832 - L1ME1 LINE L1 -4 6162 5903 764 165 30 0 chr2 13385757 13385890 -239870693 + MER2 DNA MER2_type 6 142 -203 411 234 24 69 chr2 13385890 13386034 -239870549 - L1ME1 LINE L1 -552 5614 5476 228 197 40 26 chr2 13386288 13386364 -239870219 - L1ME2 LINE L1 -1 6163 6087 780 301 53 40 chr2 13386368 13386508 -239870075 - L1MEc LINE L1 -3279 2936 2799 1987 152 0 3 chr2 13386508 13386810 -239869773 - AluJb SINE Alu -8 304 4 780 301 53 40 chr2 13386810 13387276 -239869307 - L1MEc LINE L1 -3416 2799 2322 354 121 30 0 chr2 13387317 13387383 -239869200 + LTR60 LTR ERV1 1 68 -518 928 224 44 59 chr2 13387625 13387656 -239868927 + LTR43 LTR ERV1 190 220 -382 2156 104 7 7 chr2 13387656 13387965 -239868618 + AluSc SINE Alu 1 309 0 928 224 44 59 chr2 13387965 13388205 -239868378 + LTR43 LTR ERV1 220 457 -145 947 272 80 49 chr2 13388422 13388918 -239867665 - L1MEc LINE L1 -4092 2304 1825 2109 112 0 0 chr2 13388918 13389205 -239867378 + AluSx SINE Alu 1 287 -25 207 88 0 0 chr2 13389208 13389242 -239867341 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 947 272 80 49 chr2 13389242 13389698 -239866885 - L1MEc LINE L1 -4572 1824 1265 597 239 70 37 chr2 13390039 13390282 -239866301 + MER57-int LTR ERV1 1710 1960 -2976 * 2612 233 71 17 chr2 13390279 13391208 -239865375 + MER57-int LTR ERV1 3294 4529 -407 3422 257 14 16 chr2 13391217 13392050 -239864533 + MER57-int LTR ERV1 6312 7143 -394 1340 224 100 20 chr2 13392051 13392511 -239864072 + LTR54B LTR ERV1 1 497 -1 1499 143 109 34 chr2 13393406 13393755 -239862828 - THE1C LTR MaLR 0 375 1 409 274 130 43 chr2 13394856 13395086 -239861497 - MIR SINE MIR -1 261 12 183 368 26 13 chr2 13395213 13395289 -239861294 - MIR3 SINE MIR -117 91 15 192 40 0 0 chr2 13395324 13395349 -239861234 + (CA)n Simple_repeat Simple_repeat 2 26 0 25 31 0 0 chr2 13395616 13395648 -239860935 + AT_rich Low_complexity Low_complexity 1 32 0 201 211 0 0 chr2 13395670 13395722 -239860861 + (TATATG)n Simple_repeat Simple_repeat 3 54 0 447 19 0 0 chr2 13395739 13395791 -239860792 + (CA)n Simple_repeat Simple_repeat 1 52 0 200 350 126 42 chr2 13395877 13396020 -239860563 + MIR SINE MIR 20 174 -88 330 204 20 0 chr2 13396067 13396165 -239860418 + (TA)n Simple_repeat Simple_repeat 2 101 0 357 169 48 6 chr2 13396222 13396388 -239860195 + (TA)n Simple_repeat Simple_repeat 2 174 0 1914 134 24 0 chr2 13396674 13396964 -239859619 + AluSx SINE Alu 1 297 -15 333 118 0 0 chr2 13397249 13397300 -239859283 + (CA)n Simple_repeat Simple_repeat 2 52 0 1645 85 4 0 chr2 13397408 13397643 -239858940 - L1MA2 LINE L1 0 6304 6069 561 88 0 0 chr2 13397644 13397724 -239858859 - L1MA1 LINE L1 -81 6221 6142 8926 104 16 9 chr2 13397856 13399127 -239857456 + HSMAR1 DNA Mariner 4 1284 -3 225 0 0 0 chr2 13399127 13399152 -239857431 + (TA)n Simple_repeat Simple_repeat 2 26 0 210 235 29 59 chr2 13399574 13399642 -239856941 + MIR SINE MIR 186 251 -11 193 269 15 30 chr2 13399870 13399937 -239856646 + L2 LINE L2 3203 3268 -4 233 356 30 20 chr2 13400001 13400102 -239856481 + MIR3 SINE MIR 91 192 -16 389 295 126 63 chr2 13400554 13400967 -239855616 - MLT1H LTR MaLR -4 545 107 291 332 15 49 chr2 13401040 13401305 -239855278 - HAL1 LINE L1 -504 2003 1748 271 279 43 101 chr2 13401643 13401851 -239854732 + LTR67 LTR ERVL 362 557 0 1118 186 59 116 chr2 13401955 13402233 -239854350 - MLT1A1 LTR MaLR 0 365 114 2045 129 50 19 chr2 13402233 13402597 -239853986 + THE1C LTR MaLR 1 375 0 1118 186 59 116 chr2 13402597 13402705 -239853878 - MLT1A1 LTR MaLR -251 114 1 851 292 133 49 chr2 13402732 13403760 -239852823 - HAL1 LINE L1 -883 1624 510 304 341 39 55 chr2 13403883 13404065 -239852518 - HAL1 LINE L1 -2324 183 5 1523 258 72 44 chr2 13404922 13405488 -239851095 - MER119 DNA MER1_type -1 582 1 221 382 22 29 chr2 13405576 13405712 -239850871 - MIR3 SINE MIR -3 205 71 22 35 0 0 chr2 13406221 13406250 -239850333 + AT_rich Low_complexity Low_complexity 1 29 0 250 275 123 43 chr2 13407226 13407364 -239849219 - Charlie8 DNA MER1_type -2153 264 116 201 74 0 0 chr2 13407475 13407502 -239849081 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1030 223 33 110 chr2 13408577 13409081 -239847502 + LTR8A LTR ERV1 55 586 -105 306 73 0 0 chr2 13409082 13409091 -239847492 + (TG)n Simple_repeat Simple_repeat 1 50 0 306 73 0 0 chr2 13409091 13409132 -239847451 + (TG)n Simple_repeat Simple_repeat 2 42 0 192 40 0 0 chr2 13410297 13410322 -239846261 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 3765 35 2 2 chr2 13411811 13412267 -239844316 - L1PA3 LINE L1 -3 6152 5697 214 239 0 0 chr2 13413537 13413583 -239843000 + MIR SINE MIR 95 140 -122 262 376 18 0 chr2 13413709 13413818 -239842765 - MIR3 SINE MIR -15 193 83 1917 140 88 37 chr2 13415251 13415658 -239840925 - LTR23 LTR ERV1 -9 428 1 497 226 26 9 chr2 13415758 13415873 -239840710 - LTR23-int LTR ERV1 -223 4900 4784 6554 155 83 10 chr2 13415883 13417146 -239839437 - LTR49-int LTR ERV1 -657 5674 4320 215 61 30 0 chr2 13417171 13417204 -239839379 + (TTA)n Simple_repeat Simple_repeat 2 35 0 1486 168 35 80 chr2 13417204 13417578 -239839005 - LTR49-int LTR ERV1 -4417 1914 1558 1546 200 43 130 chr2 13417703 13418373 -239838210 - LTR9 LTR ERV1 0 612 1 2078 164 50 9 chr2 13419183 13419603 -239836980 - LTR23 LTR ERV1 0 437 1 22 35 0 0 chr2 13419874 13419903 -239836680 + AT_rich Low_complexity Low_complexity 1 29 0 1324 184 92 48 chr2 13419959 13420317 -239836266 - MLT1A2 LTR MaLR 0 374 1 198 396 36 27 chr2 13420571 13420682 -239835901 - MIR SINE MIR -63 145 34 396 0 0 0 chr2 13421277 13421321 -239835262 + (CA)n Simple_repeat Simple_repeat 1 44 0 592 241 45 11 chr2 13421494 13421665 -239834918 + MLT1H LTR MaLR 1 153 -396 1829 206 84 24 chr2 13421735 13422197 -239834386 - LTR2B LTR ERV1 0 490 1 41047 66 14 21 chr2 13422197 13427707 -239828876 - Harlequin LTR ERV1 0 6896 1426 186 43 0 0 chr2 13427707 13427730 -239828853 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 41047 66 14 21 chr2 13427730 13427757 -239828826 - Harlequin LTR ERV1 -5470 1426 1400 6054 255 60 38 chr2 13427873 13429964 -239826619 - L1MD2 LINE L1 -159 6460 4264 2076 177 67 0 chr2 13429964 13430365 -239826218 - MSTA LTR MaLR 0 428 1 6054 255 60 38 chr2 13430365 13432005 -239824578 - L1MD2 LINE L1 -2355 4264 2661 428 173 0 0 chr2 13432350 13432425 -239824158 + MSTD LTR MaLR 322 396 0 1149 273 14 39 chr2 13432425 13432909 -239823674 - L1MD2 LINE L1 -5861 548 20 283 340 116 7 chr2 13435502 13435649 -239820934 + MIR SINE MIR 68 230 -32 21 0 0 0 chr2 13436021 13436042 -239820541 + AT_rich Low_complexity Low_complexity 1 21 0 1761 186 3 0 chr2 13436458 13436749 -239819834 - AluJo SINE Alu -11 301 10 3581 263 20 25 chr2 13437292 13438146 -239818437 + L1MC3 LINE L1 2 848 -5359 1965 111 0 88 chr2 13438146 13438487 -239818096 + AluSx SINE Alu 1 311 -1 3581 263 20 25 chr2 13438487 13438994 -239817589 + L1MC3 LINE L1 848 1356 -4851 1812 232 112 48 chr2 13438995 13440228 -239816355 + L1MC3 LINE L1 1605 2825 -3739 4239 239 66 53 chr2 13440364 13441653 -239814930 + L1MC3 LINE L1 2792 4063 -2501 273 57 0 0 chr2 13441653 13441688 -239814895 + (TG)n Simple_repeat Simple_repeat 2 36 0 4239 239 66 53 chr2 13441688 13444390 -239812193 + L1MC3 LINE L1 4063 5790 -774 1108 215 19 8 chr2 13444547 13444812 -239811771 + L1MC3 LINE L1 7928 8195 -8 21 0 0 0 chr2 13446479 13446500 -239810083 + AT_rich Low_complexity Low_complexity 1 21 0 487 274 52 24 chr2 13448773 13448985 -239807598 - HAL1 LINE L1 0 2507 2290 378 366 32 32 chr2 13449105 13449356 -239807227 - MIR SINE MIR 0 262 12 1546 144 4 0 chr2 13449362 13449598 -239806985 + AluSq SINE Alu 1 237 -76 431 279 0 33 chr2 13450769 13450891 -239805692 - LTR49-int LTR ERV1 -3773 2558 2441 243 0 0 0 chr2 13451036 13451063 -239805520 + (TTTTA)n Simple_repeat Simple_repeat 4 30 0 7537 28 0 0 chr2 13451063 13452351 -239804232 - L1PA3 LINE L1 -13 6142 4854 1085 243 6 61 chr2 13453653 13453982 -239802601 - LTR40b LTR ERVL 0 462 152 381 345 39 57 chr2 13454092 13454321 -239802262 - L1MEd LINE L1 -5640 479 255 23 0 0 0 chr2 13454409 13454432 -239802151 + AT_rich Low_complexity Low_complexity 1 23 0 1968 203 31 14 chr2 13454546 13454965 -239801618 - MSTB LTR MaLR 0 426 1 189 404 72 18 chr2 13454992 13455158 -239801425 + L2 LINE L2 2872 3046 -226 213 253 25 0 chr2 13455261 13455340 -239801243 + (TAA)n Simple_repeat Simple_repeat 3 83 0 201 381 79 5 chr2 13455366 13455555 -239801028 - MIR SINE MIR -37 225 23 24 0 0 0 chr2 13455578 13455602 -239800981 + AT_rich Low_complexity Low_complexity 1 24 0 212 250 33 0 chr2 13456157 13456217 -239800366 + A-rich Low_complexity Low_complexity 4 65 0 225 305 84 15 chr2 13458473 13458604 -239797979 - MIR SINE MIR 0 262 123 5507 219 36 62 chr2 13460075 13462388 -239794195 + L1MC2 LINE L1 3510 5729 -615 2028 134 3 0 chr2 13462388 13462687 -239793896 + AluSx SINE Alu 1 300 -12 5507 219 36 62 chr2 13462687 13463278 -239793305 + L1MC2 LINE L1 5729 6334 -10 333 0 0 0 chr2 13463278 13463315 -239793268 + (A)n Simple_repeat Simple_repeat 1 37 0 4780 173 39 19 chr2 13465913 13466813 -239789770 + L1MA8 LINE L1 5304 6184 -107 13472 152 22 13 chr2 13466813 13467325 -239789258 - Tigger1 DNA MER2_type 0 2418 1912 1635 196 3 0 chr2 13467325 13467621 -239788962 - AluJo SINE Alu -15 297 1 13472 152 22 13 chr2 13467621 13468661 -239787922 - Tigger1 DNA MER2_type -506 1912 882 198 0 0 0 chr2 13468661 13468683 -239787900 + (TTTC)n Simple_repeat Simple_repeat 2 23 0 2199 89 3 3 chr2 13468685 13468976 -239787607 - AluSp SINE Alu -22 291 1 13472 152 22 13 chr2 13468976 13469817 -239786766 - Tigger1 DNA MER2_type -1536 882 1 4780 173 39 19 chr2 13469817 13469883 -239786700 + L1MA8 LINE L1 6184 6290 -1 276 235 88 10 chr2 13469935 13470037 -239786546 + L1MA9 LINE L1 6116 6225 -87 208 317 10 20 chr2 13470273 13470374 -239786209 - MIR3 SINE MIR -104 104 5 252 272 28 84 chr2 13471660 13471800 -239784783 - MIR SINE MIR -65 143 18 933 268 65 74 chr2 13471939 13472398 -239784185 - MER77 LTR ERV1 -6 599 145 388 271 18 47 chr2 13472383 13472553 -239784030 - MER77 LTR ERV1 -360 245 81 * 2051 186 59 12 chr2 13472596 13473005 -239783578 - MSTA LTR MaLR 0 428 1 518 287 64 5 chr2 13474214 13474416 -239782167 + LTR50 LTR ERVL 11 224 -571 405 305 136 53 chr2 13474413 13474715 -239781868 + LTR50 LTR ERVL 356 682 -113 * 1966 269 23 44 chr2 13475392 13476001 -239780582 + L1M3e LINE L1 466 1061 -6428 3339 237 73 35 chr2 13476046 13477282 -239779301 + L1M3e LINE L1 2008 3196 -4369 1961 136 0 3 chr2 13477282 13477576 -239779007 + AluSc SINE Alu 1 293 -16 3339 237 73 35 chr2 13477576 13478639 -239777944 + L1M3e LINE L1 3196 4405 -3160 539 234 58 47 chr2 13478646 13478920 -239777663 - MER114 LTR ERV -133 515 239 249 298 0 32 chr2 13478980 13479074 -239777509 - MER114 LTR ERV -505 143 53 22 35 0 0 chr2 13479160 13479189 -239777394 + AT_rich Low_complexity Low_complexity 1 29 0 2123 122 0 3 chr2 13479293 13479596 -239776987 - AluSq SINE Alu -11 302 1 416 336 65 70 chr2 13480163 13480579 -239776004 + L1M3e LINE L1 1596 2009 -5477 539 229 0 0 chr2 13480742 13480851 -239775732 - AluJb SINE Alu -203 109 1 521 226 92 0 chr2 13480851 13481015 -239775568 + L1M3e LINE L1 4286 4464 -3101 * 3117 11 0 0 chr2 13481011 13481370 -239775213 - L1PA2 LINE L1 -543 5612 5254 4828 18 0 2 chr2 13481377 13481940 -239774643 + L1PA2 LINE L1 5591 6152 -3 1252 284 26 11 chr2 13481952 13482495 -239774088 + L1M3e LINE L1 4447 4997 -2568 3192 175 42 36 chr2 13482501 13483199 -239773384 + L1MB2 LINE L1 5442 6143 -28 216 67 0 0 chr2 13484820 13484850 -239771733 + (TG)n Simple_repeat Simple_repeat 1 30 0 290 327 48 54 chr2 13484962 13485130 -239771453 - MIR SINE MIR -11 251 85 306 0 0 0 chr2 13485483 13485517 -239771066 + (TG)n Simple_repeat Simple_repeat 2 35 0 847 394 15 0 chr2 13485654 13486055 -239770528 + L2 LINE L2 2438 2844 -470 340 292 44 74 chr2 13486194 13486569 -239770014 + MLT1H1 LTR MaLR 75 506 -49 29 0 0 0 chr2 13486792 13486821 -239769762 + AT_rich Low_complexity Low_complexity 1 29 0 237 365 36 36 chr2 13487743 13487910 -239768673 - MIR SINE MIR -11 251 85 826 263 55 41 chr2 13488093 13488386 -239768197 + L2 LINE L2 2009 2305 -1009 488 326 127 25 chr2 13488402 13488638 -239767945 - LTR16B LTR ERVL -196 268 9 821 297 120 24 chr2 13488646 13489020 -239767563 + L2 LINE L2 2567 2976 -338 205 298 71 77 chr2 13489204 13489372 -239767211 + MIR SINE MIR 25 191 -71 358 114 29 14 chr2 13489726 13489796 -239766787 + CT-rich Low_complexity Low_complexity 3 73 0 1299 152 65 115 chr2 13489806 13490128 -239766455 - AluJb SINE Alu -3 309 4 424 300 92 21 chr2 13491554 13491794 -239764789 + L1MEd LINE L1 27 283 -5836 21 71 0 0 chr2 13491957 13491999 -239764584 + AT_rich Low_complexity Low_complexity 1 42 0 329 289 72 58 chr2 13492573 13492781 -239763802 + MIR SINE MIR 8 218 -44 272 300 75 47 chr2 13493065 13493258 -239763325 - MIR SINE MIR -41 221 19 349 41 20 0 chr2 13493513 13493562 -239763021 - MADE1 DNA Mariner 0 80 31 367 80 0 0 chr2 13493604 13493654 -239762929 + MADE1 DNA Mariner 31 80 0 370 298 41 0 chr2 13493686 13493807 -239762776 - L1MC4 LINE L1 -442 7600 7475 332 115 0 82 chr2 13494073 13494134 -239762449 - MLT2D LTR ERVL 0 414 369 378 224 22 34 chr2 13494141 13494320 -239762263 + (TA)n Simple_repeat Simple_repeat 2 178 0 7456 31 16 0 chr2 13494372 13495365 -239761218 - L1PA4 LINE L1 -3 6152 5156 1832 126 25 7 chr2 13495377 13495662 -239760921 + AluSx SINE Alu 6 295 -17 1015 247 45 17 chr2 13495783 13496075 -239760508 - MLT2D LTR ERVL -114 300 1 1286 24 24 18 chr2 13496417 13496583 -239760000 + L1PA4 LINE L1 5987 6153 -2 1132 234 86 24 chr2 13496818 13497156 -239759427 + MLT2D LTR ERVL 1 359 -55 775 98 40 6 chr2 13497176 13497349 -239759234 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 245 103 0 26 chr2 13497383 13497422 -239759161 + MLT2D LTR ERVL 360 397 0 1042 313 113 44 chr2 13499749 13500494 -239756089 + L2 LINE L2 10 805 -2509 21 36 0 0 chr2 13501039 13501067 -239755516 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 13501305 13501327 -239755256 + AT_rich Low_complexity Low_complexity 1 22 0 26 30 0 0 chr2 13501522 13501555 -239755028 + AT_rich Low_complexity Low_complexity 1 33 0 24 67 0 0 chr2 13502466 13502511 -239754072 + AT_rich Low_complexity Low_complexity 1 45 0 537 238 7 33 chr2 13502511 13502662 -239753921 - L1MC3 LINE L1 -56 7729 7583 302 132 38 19 chr2 13502657 13502710 -239753873 - L1MC3 LINE L1 -585 7200 7147 * 437 299 16 16 chr2 13502709 13502893 -239753690 + L1M4 LINE L1 2499 2682 -3464 535 228 4 97 chr2 13503022 13503259 -239753324 - L1MCb LINE L1 -3261 3303 3089 420 288 0 14 chr2 13503305 13503444 -239753139 - L1MCb LINE L1 -3629 2935 2799 4634 243 21 45 chr2 13503511 13503634 -239752949 - L1PA13 LINE L1 -2709 4088 3964 1939 156 0 0 chr2 13503634 13503942 -239752641 - AluSg SINE Alu -2 308 1 4634 243 21 45 chr2 13503942 13506370 -239750213 - L1PA13 LINE L1 -2833 3964 1371 774 298 0 14 chr2 13506863 13507078 -239749505 - L1PA13 LINE L1 -6575 212 1 2918 259 60 27 chr2 13507082 13508563 -239748020 - L1MCb LINE L1 -4259 2306 363 2409 117 5 19 chr2 13508563 13508932 -239747651 - THE1B LTR MaLR 0 364 1 2918 259 60 27 chr2 13508932 13509307 -239747276 - L1MCb LINE L1 -6202 363 2 24 0 0 0 chr2 13509392 13509416 -239747167 + AT_rich Low_complexity Low_complexity 1 24 0 360 0 0 0 chr2 13509676 13509716 -239746867 + (CA)n Simple_repeat Simple_repeat 2 41 0 297 0 0 0 chr2 13510058 13510091 -239746492 + (TG)n Simple_repeat Simple_repeat 2 34 0 598 268 46 26 chr2 13510151 13510345 -239746238 + MER20 DNA MER1_type 1 198 -21 1075 292 87 22 chr2 13511374 13511836 -239744747 + L1ME1 LINE L1 21 512 -5911 665 286 26 40 chr2 13512154 13512427 -239744156 + L1ME1 LINE L1 970 1238 -5185 498 307 61 44 chr2 13512465 13513134 -239743449 + L1ME1 LINE L1 1367 2217 -4724 313 294 159 19 chr2 13513146 13513455 -239743128 + L1ME1 LINE L1 2382 2733 -4389 599 274 89 23 chr2 13513599 13513953 -239742630 + L1ME1 LINE L1 2904 3248 -3693 2331 57 7 3 chr2 13513953 13514251 -239742332 - AluY SINE Alu -12 299 1 599 274 89 23 chr2 13514251 13514311 -239742272 + L1ME1 LINE L1 3248 3303 -3638 1756 252 70 51 chr2 13514318 13515866 -239740717 + L1ME1 LINE L1 5178 6750 -211 29 90 0 0 chr2 13516636 13516714 -239739869 + AT_rich Low_complexity Low_complexity 1 78 0 386 118 0 26 chr2 13518876 13518952 -239737631 + (TTCCC)n Simple_repeat Simple_repeat 1 74 0 1915 129 10 26 chr2 13518952 13519254 -239737329 - AluSx SINE Alu -15 297 1 2029 147 39 0 chr2 13520053 13520387 -239736196 - MER7A DNA MER2_type 0 346 2 22 0 0 0 chr2 13520891 13520913 -239735670 + AT_rich Low_complexity Low_complexity 1 22 0 344 291 129 43 chr2 13521734 13521944 -239734639 + HAL1 LINE L1 1425 1652 -855 28 29 0 0 chr2 13522161 13522196 -239734387 + AT_rich Low_complexity Low_complexity 1 35 0 321 332 89 59 chr2 13522411 13522682 -239733901 + L2 LINE L2 3031 3309 -4 228 237 0 52 chr2 13522783 13522880 -239733703 + A-rich Low_complexity Low_complexity 6 97 0 944 271 66 11 chr2 13522895 13523245 -239733338 + L1MCb LINE L1 36 404 -5641 633 194 129 16 chr2 13523256 13523530 -239733053 + L1MC3 LINE L1 5180 5481 -761 333 51 67 67 chr2 13523608 13523786 -239732797 + (TA)n Simple_repeat Simple_repeat 2 179 0 523 23 35 23 chr2 13523903 13523990 -239732593 + (TA)n Simple_repeat Simple_repeat 1 88 0 4525 220 27 15 chr2 13523991 13524335 -239732248 + L1MC3 LINE L1 5488 5827 -1958 4009 57 0 6 chr2 13524335 13524845 -239731738 + L1PA6 LINE L1 5648 6154 0 4525 220 27 15 chr2 13524845 13525618 -239730965 + L1MC3 LINE L1 5827 6618 -1167 498 147 0 0 chr2 13526284 13526359 -239730224 + AluSg/x SINE Alu 211 285 -27 507 331 39 33 chr2 13526420 13526838 -239729745 + L1MC/D LINE L1 5317 5744 -506 23 0 0 0 chr2 13527072 13527095 -239729488 + AT_rich Low_complexity Low_complexity 1 23 0 5355 162 21 26 chr2 13527097 13527675 -239728908 - L1MA4 LINE L1 -9 6291 5712 2211 73 4 0 chr2 13527675 13527949 -239728634 + AluY SINE Alu 21 295 -16 5355 162 21 26 chr2 13527949 13529079 -239727504 - L1MA4 LINE L1 -588 5712 4386 21 89 0 0 chr2 13529088 13529144 -239727439 + AT_rich Low_complexity Low_complexity 1 56 0 198 138 58 11 chr2 13529145 13529232 -239727351 + (TATAA)n Simple_repeat Simple_repeat 2 92 0 38 51 0 0 chr2 13529236 13529295 -239727288 + AT_rich Low_complexity Low_complexity 1 59 0 3322 156 36 21 chr2 13529295 13529925 -239726658 - L1MA4 LINE L1 -1754 4392 3753 852 167 5 31 chr2 13529945 13530167 -239726416 + SVA Other Other 461 676 -710 751 201 34 130 chr2 13530306 13530586 -239725997 + MLT1A1 LTR MaLR 74 321 -44 1654 158 49 38 chr2 13530586 13530954 -239725629 + THE1C LTR MaLR 4 375 0 751 201 34 130 chr2 13530954 13530996 -239725587 + MLT1A1 LTR MaLR 321 365 0 1498 189 50 15 chr2 13531001 13531340 -239725243 + L1MC3 LINE L1 7411 7761 -24 4253 255 65 21 chr2 13532168 13532969 -239723614 + L1MDa LINE L1 510 1400 -5140 3921 61 0 0 chr2 13532969 13533462 -239723121 + L1PA5 LINE L1 5662 6154 0 4253 255 65 21 chr2 13533462 13534066 -239722517 + L1MDa LINE L1 1400 1976 -4564 1537 190 3 10 chr2 13534095 13534280 -239722303 - AluY SINE Alu 0 311 127 303 28 0 0 chr2 13534280 13534316 -239722267 + (TG)n Simple_repeat Simple_repeat 1 36 0 1537 190 3 10 chr2 13534316 13534430 -239722153 - AluY SINE Alu -184 127 14 2037 224 75 45 chr2 13534537 13534901 -239721682 + L1MD2 LINE L1 1614 1965 -4575 2345 78 16 0 chr2 13534901 13535082 -239721501 - AluY SINE Alu 0 311 121 369 0 0 0 chr2 13535082 13535123 -239721460 + (TG)n Simple_repeat Simple_repeat 2 42 0 2345 78 16 0 chr2 13535123 13535247 -239721336 - AluY SINE Alu -190 121 1 2037 224 75 45 chr2 13535247 13535665 -239720918 + L1MD2 LINE L1 1965 2420 -4120 1702 187 9 3 chr2 13535676 13536013 -239720570 - L1P LINE L1 -1352 4794 4456 4833 180 13 33 chr2 13536014 13536462 -239720121 + L1PA16 LINE L1 4924 5380 -786 2274 74 6 19 chr2 13536462 13536773 -239719810 + AluY SINE Alu 1 307 -4 4833 180 13 33 chr2 13536773 13537582 -239719001 + L1PA16 LINE L1 5380 6166 0 21 0 0 0 chr2 13537609 13537630 -239718953 + AT_rich Low_complexity Low_complexity 1 21 0 1040 256 95 7 chr2 13537633 13538327 -239718256 + L1MD2 LINE L1 2453 3204 -3336 258 250 0 42 chr2 13538327 13538399 -239718184 + AluYa8 SINE Alu 116 184 -116 4634 252 72 60 chr2 13538404 13540128 -239716455 + L1MD2 LINE L1 3540 5242 -1511 1520 229 37 0 chr2 13540128 13540478 -239716105 + MLT1A1 LTR MaLR 3 365 0 4634 252 72 60 chr2 13540478 13541499 -239715084 + L1MD2 LINE L1 5242 6249 -504 252 77 0 0 chr2 13541499 13541538 -239715045 + (TTTA)n Simple_repeat Simple_repeat 4 42 0 3729 16 0 5 chr2 13541541 13541971 -239714612 - L1PA3 LINE L1 -15 6140 5713 4634 252 72 60 chr2 13541971 13542353 -239714230 + L1MD2 LINE L1 6250 6732 -21 1683 241 21 58 chr2 13542579 13543098 -239713485 + MLT1D LTR MaLR 6 505 0 284 224 9 93 chr2 13544041 13544148 -239712435 + MLT1J2 LTR MaLR 350 447 -3 194 253 72 12 chr2 13544151 13544234 -239712349 - L2 LINE L2 -1081 2233 2146 21 57 0 0 chr2 13544833 13544868 -239711715 + AT_rich Low_complexity Low_complexity 1 35 0 182 371 131 11 chr2 13545716 13545891 -239710692 - MIR SINE MIR -10 252 57 3890 224 50 15 chr2 13546813 13548285 -239708298 + L1MC2 LINE L1 4593 6120 -224 30 45 0 0 chr2 13548500 13548544 -239708039 + AT_rich Low_complexity Low_complexity 1 44 0 7080 35 0 1 chr2 13548562 13549420 -239707163 - L1PA4 LINE L1 -4 6151 5295 * 14074 25 1 0 chr2 13549415 13551090 -239705493 + L1PA4 LINE L1 3620 5295 -851 23 0 0 0 chr2 13551097 13551120 -239705463 + AT_rich Low_complexity Low_complexity 1 23 0 2204 95 3 0 chr2 13551734 13552028 -239704555 + AluSx SINE Alu 1 295 -17 269 262 184 0 chr2 13552170 13552273 -239704310 + L2 LINE L2 3187 3308 -5 2868 215 5 67 chr2 13552702 13553438 -239703145 - LTR8 LTR ERV1 0 691 1 901 261 5 9 chr2 13555733 13555944 -239700639 - LTR28 LTR ERV1 -324 696 487 235 47 0 47 chr2 13555945 13555988 -239700595 + (TTTTA)n Simple_repeat Simple_repeat 1 41 0 7255 31 16 2 chr2 13555988 13557335 -239699248 - L1PA3 LINE L1 -24 6131 4765 786 247 187 28 chr2 13557358 13557712 -239698871 - LTR28 LTR ERV1 -649 371 1 1469 162 23 5 chr2 13557715 13558035 -239698548 - LTR28-int LTR ERV1 -4 7087 4918 8026 150 45 6 chr2 13558036 13559353 -239697230 + THE1C-int LTR MaLR 212 1579 -1 1883 143 67 17 chr2 13559355 13559712 -239696871 + THE1C LTR MaLR 1 375 0 13636 160 36 25 chr2 13559712 13563537 -239693046 - MER52-int LTR ERV1 -524 5422 632 393 204 0 45 chr2 13563558 13563646 -239692937 - MER52-int LTR ERV1 -885 3995 3912 4272 211 27 70 chr2 13563656 13564830 -239691753 - MER52-int LTR ERV1 -440 4777 548 535 189 104 67 chr2 13564827 13564991 -239691592 - MER52-int LTR ERV1 -6516 575 406 * 544 269 96 56 chr2 13564978 13565227 -239691356 - MER52-int LTR ERV1 -6832 259 1 875 278 23 23 chr2 13565275 13565538 -239691045 - LTR28 LTR ERV1 -316 704 442 573 208 13 47 chr2 13565674 13565823 -239690760 - LTR28 LTR ERV1 -874 146 3 248 252 141 0 chr2 13566047 13566128 -239690455 - MIR SINE MIR -94 114 35 1856 40 0 0 chr2 13568862 13569085 -239687498 - L1PA4 LINE L1 -13 6142 5920 197 379 115 21 chr2 13569511 13569746 -239686837 + MIR SINE MIR 5 261 -1 239 203 125 16 chr2 13570498 13570562 -239686021 + L2 LINE L2 3015 3085 -187 1483 276 82 19 chr2 13571105 13571650 -239684933 - L1ME3 LINE L1 -6 6156 5566 1610 182 13 23 chr2 13571650 13571957 -239684626 + AluJb SINE Alu 1 304 -8 1483 276 82 19 chr2 13571957 13572037 -239684546 - L1ME3 LINE L1 -596 5566 5492 427 214 55 41 chr2 13572114 13572259 -239684324 - L1ME1 LINE L1 -18 6148 6002 11999 245 32 14 chr2 13572261 13577077 -239679506 - L1PA16 LINE L1 -285 7319 2449 243 0 0 0 chr2 13577077 13577104 -239679479 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 11999 245 32 14 chr2 13577104 13577380 -239679203 - L1PA16 LINE L1 -5155 2449 2179 373 274 0 0 chr2 13577507 13577613 -239678970 - L1ME3 LINE L1 -885 5474 5369 24 32 0 0 chr2 13577939 13577970 -239678613 + AT_rich Low_complexity Low_complexity 1 31 0 3349 187 16 14 chr2 13579405 13580099 -239676484 + L1P LINE L1 3219 3913 -2233 202 297 184 43 chr2 13580208 13580393 -239676190 - MIR SINE MIR -3 259 49 485 266 29 29 chr2 13580603 13580776 -239675807 - L2 LINE L2 0 3313 3141 1477 299 72 46 chr2 13580820 13582080 -239674503 + L1MCc LINE L1 -498 727 -5689 1662 236 27 42 chr2 13582080 13582554 -239674029 + MLT1C LTR MaLR 1 467 0 1477 299 72 46 chr2 13582554 13582832 -239673751 + L1MCc LINE L1 727 996 -5420 420 20 0 0 chr2 13582832 13582881 -239673702 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 1477 299 72 46 chr2 13582881 13582910 -239673673 + L1MCc LINE L1 996 1433 -4983 23 54 0 0 chr2 13582919 13582956 -239673627 + AT_rich Low_complexity Low_complexity 1 37 0 428 234 61 8 chr2 13583128 13583288 -239673295 + L1MCc LINE L1 1710 1825 -4601 4807 154 9 4 chr2 13583288 13584554 -239672029 - L1PA16 LINE L1 -3 6163 4873 2892 226 56 5 chr2 13584576 13585145 -239671438 - L1P LINE L1 -1158 4988 4370 192 77 0 0 chr2 13585145 13585171 -239671412 + (TG)n Simple_repeat Simple_repeat 2 27 0 2892 226 56 5 chr2 13585171 13585357 -239671226 - L1P LINE L1 -1776 4370 4195 704 298 91 14 chr2 13585351 13585865 -239670718 + L1MCc LINE L1 1928 2481 -4126 * 328 284 31 53 chr2 13585886 13586111 -239670472 + L1MCc LINE L1 2727 2946 -3480 1652 192 7 10 chr2 13586215 13586507 -239670076 - AluJb SINE Alu -12 300 10 2280 143 6 19 chr2 13586507 13586872 -239669711 - THE1B LTR MaLR -2 362 3 9083 119 107 2 chr2 13586874 13588304 -239668279 - THE1B-int LTR MaLR 0 1580 1 2055 139 21 48 chr2 13588304 13588678 -239667905 - THE1B LTR MaLR 0 364 1 745 261 62 12 chr2 13588694 13589019 -239667564 + L1MCc LINE L1 3031 3371 -3055 735 228 54 0 chr2 13589019 13589186 -239667397 + LTR47A LTR ERVL 277 452 0 266 302 79 22 chr2 13589202 13589341 -239667242 + LTR47A-int LTR ERVL 15 161 -5182 470 236 6 67 chr2 13589528 13589693 -239666890 + HERV17 LTR ERV1 2131 2285 -2595 2291 249 62 23 chr2 13589717 13590415 -239666168 - MER50 LTR ERV1 0 734 10 775 256 26 64 chr2 13590422 13590794 -239665789 + HERV17 LTR ERV1 1948 2397 -3549 440 211 85 13 chr2 13590792 13590905 -239665678 + HERV17 LTR ERV1 2538 2911 -3352 * 538 191 176 15 chr2 13590914 13591050 -239665533 + MER34C LTR ERV1 160 317 -268 273 103 0 0 chr2 13591050 13591089 -239665494 + HERV17 LTR ERV1 1197 1235 -3888 2714 143 41 12 chr2 13591108 13591625 -239664958 + HERV17 LTR ERV1 1072 1603 -6213 404 148 49 12 chr2 13591625 13591706 -239664877 + MER4A LTR ERV1 1 84 -580 547 186 9 3 chr2 13591706 13591820 -239664763 - LTR10E LTR ERV1 0 590 402 2406 204 80 95 chr2 13591852 13592779 -239663804 + HERV17 LTR ERV1 26 938 -5711 1165 124 81 15 chr2 13592772 13593179 -239663404 + HERV17 LTR ERV1 709 2694 -3955 * 711 287 0 6 chr2 13593170 13593351 -239663232 + HERV17 LTR ERV1 3138 3317 -4468 * 4038 158 32 41 chr2 13593331 13594389 -239662194 + HERV17 LTR ERV1 956 3447 -3202 328 244 171 0 chr2 13594394 13594476 -239662107 - LTR8 LTR ERV1 -438 253 158 2196 79 47 0 chr2 13594476 13594816 -239661767 + MER57-int LTR ERV1 1810 2165 -4731 2505 173 10 5 chr2 13594909 13595446 -239661137 + MER57-int LTR ERV1 2567 4823 -1826 3346 206 0 5 chr2 13595456 13596043 -239660540 + MER57-int LTR ERV1 3376 3959 -2937 2200 162 17 33 chr2 13596202 13596757 -239659826 + LTR10E LTR ERV1 1 602 0 785 156 5 64 chr2 13596776 13596987 -239659596 + MER4A LTR ERV1 261 517 -147 2245 125 91 24 chr2 13596989 13597030 -239659553 + MER57-int LTR ERV1 1791 1828 -5988 3207 80 2 2 chr2 13597030 13597457 -239659126 - LTR3 LTR ERVK -2 427 1 2245 125 91 24 chr2 13597457 13597910 -239658673 + MER57-int LTR ERV1 1828 2318 -5498 3463 123 45 72 chr2 13597911 13598603 -239657980 + MER57-int LTR ERV1 2868 3540 -4276 2439 191 28 2 chr2 13598604 13599034 -239657549 - LTR8 LTR ERV1 -250 441 1 11520 139 30 73 chr2 13599034 13600171 -239656412 + MER57-int LTR ERV1 3073 4258 -3160 1758 118 50 4 chr2 13600171 13600456 -239656127 + AluSx SINE Alu 11 307 0 11520 139 30 73 chr2 13600456 13601234 -239655349 + MER57-int LTR ERV1 4258 4866 -2552 2153 132 3 0 chr2 13601234 13601544 -239655039 + AluSp SINE Alu 1 311 -2 11520 139 30 73 chr2 13601544 13602033 -239654550 + MER57-int LTR ERV1 4866 5375 -2043 3932 118 38 12 chr2 13602032 13602759 -239653824 + MER57-int LTR ERV1 5249 6223 -1593 * 381 93 0 0 chr2 13602864 13602918 -239653665 + (TG)n Simple_repeat Simple_repeat 1 54 0 341 363 45 5 chr2 13603373 13603574 -239653009 - MIR SINE MIR -3 259 51 2072 128 0 24 chr2 13604385 13604683 -239651900 - AluSx SINE Alu -21 291 1 21 0 0 0 chr2 13605288 13605309 -239651274 + AT_rich Low_complexity Low_complexity 1 21 0 190 328 0 0 chr2 13605648 13605709 -239650874 + MIR SINE MIR 172 232 -30 234 275 50 12 chr2 13606195 13606275 -239650308 + MIR SINE MIR 132 214 -48 2581 118 3 0 chr2 13606334 13606697 -239649886 + THE1B LTR MaLR 1 364 0 27 73 0 0 chr2 13607835 13607890 -239648693 + AT_rich Low_complexity Low_complexity 1 55 0 237 180 62 47 chr2 13608039 13608167 -239648416 + (TATAA)n Simple_repeat Simple_repeat 5 134 0 * 344 182 85 0 chr2 13608119 13608284 -239648299 + (TA)n Simple_repeat Simple_repeat 2 180 0 * 347 182 45 28 chr2 13608178 13608354 -239648229 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 32 0 0 0 chr2 13608354 13608386 -239648197 + AT_rich Low_complexity Low_complexity 1 32 0 259 234 29 29 chr2 13608389 13608560 -239648023 + (TTATA)n Simple_repeat Simple_repeat 5 175 0 * 360 207 59 6 chr2 13608549 13608718 -239647865 + (TA)n Simple_repeat Simple_repeat 2 179 0 296 289 50 69 chr2 13608809 13608968 -239647615 + MIR SINE MIR 36 191 -71 238 291 64 73 chr2 13609300 13609410 -239647173 - L2 LINE L2 0 3272 3164 351 44 0 0 chr2 13611601 13611646 -239644937 + (CA)n Simple_repeat Simple_repeat 2 46 0 2350 74 3 13 chr2 13611817 13612128 -239644455 + AluY SINE Alu 3 310 -1 291 294 20 0 chr2 13612328 13612430 -239644153 + L1MCb LINE L1 1 104 -5941 627 244 19 33 chr2 13612448 13612661 -239643922 + L1MCb LINE L1 1560 1769 -4795 658 250 11 44 chr2 13612666 13612846 -239643737 - MIR SINE MIR -87 175 2 280 226 145 0 chr2 13613749 13613811 -239642772 + MER69 DNA AcHobo 4 74 -2452 792 279 9 9 chr2 13613907 13614122 -239642461 + MER20 DNA MER1_type 1 215 -4 1876 123 44 82 chr2 13614168 13614558 -239642025 + THE1C LTR MaLR 1 375 0 21 36 0 0 chr2 13614816 13614844 -239641739 + AT_rich Low_complexity Low_complexity 1 28 0 333 47 0 0 chr2 13615946 13615989 -239640594 + (TG)n Simple_repeat Simple_repeat 2 44 0 182 348 99 51 chr2 13617763 13618096 -239638487 + L3b LINE CR1 1104 1452 -131 729 154 0 0 chr2 13619232 13619355 -239637228 - AluSc SINE Alu -22 287 165 1000 271 100 12 chr2 13620032 13620372 -239636211 + MLT1B LTR MaLR 1 370 -20 887 81 81 0 chr2 13620555 13620679 -239635904 + MER85 DNA T2_type 1 134 -5 251 221 63 16 chr2 13621146 13621273 -239635310 + (CATATA)n Simple_repeat Simple_repeat 5 137 0 23 0 0 0 chr2 13621363 13621386 -239635197 + AT_rich Low_complexity Low_complexity 1 23 0 212 371 77 21 chr2 13622254 13622397 -239634186 + MIR SINE MIR 91 241 -21 1041 181 160 0 chr2 13623045 13623283 -239633300 + MLT2D LTR ERVL 1 276 -138 1201 216 0 0 chr2 13623283 13623510 -239633073 + ERVL-D LTR ERVL 882 1108 -4656 5485 162 38 22 chr2 13623534 13624561 -239632022 + ERVL-D LTR ERVL 4715 5757 -7 988 137 0 0 chr2 13624561 13624707 -239631876 + MLT2D LTR ERVL 1 146 -268 1298 176 117 0 chr2 13624708 13624947 -239631636 - MLT1A1 LTR MaLR 0 365 99 28 48 0 0 chr2 13627100 13627142 -239629441 + AT_rich Low_complexity Low_complexity 1 42 0 2131 78 3 7 chr2 13628007 13628352 -239628231 - AluY SINE Alu 0 344 1 220 281 0 0 chr2 13629258 13629315 -239627268 + (CATATA)n Simple_repeat Simple_repeat 4 60 0 192 238 0 0 chr2 13629319 13629382 -239627201 + (TG)n Simple_repeat Simple_repeat 2 64 0 24 32 0 0 chr2 13629529 13629560 -239627023 + AT_rich Low_complexity Low_complexity 1 31 0 861 153 0 0 chr2 13629774 13629905 -239626678 - FLAM_C SINE Alu -2 131 1 1636 210 21 0 chr2 13630023 13630357 -239626226 - MER58B DNA MER1_type 0 341 1 1044 197 14 10 chr2 13631032 13631240 -239625343 + MER2 DNA MER2_type 3 211 -134 34 0 0 0 chr2 13631541 13631575 -239625008 + AT_rich Low_complexity Low_complexity 1 34 0 29 28 0 0 chr2 13631629 13631665 -239624918 + AT_rich Low_complexity Low_complexity 1 36 0 23 54 0 0 chr2 13632293 13632330 -239624253 + AT_rich Low_complexity Low_complexity 1 37 0 7408 34 2 0 chr2 13632688 13633901 -239622682 - L1PA4 LINE L1 0 6155 4941 10615 37 8 1 chr2 13633901 13635219 -239621364 + L1P LINE L1 2935 4262 -1884 2416 144 61 15 chr2 13635387 13635556 -239621027 + LTR1B LTR ERV1 1 161 -665 2026 153 30 33 chr2 13635556 13635921 -239620662 - THE1B LTR MaLR 0 364 1 2416 144 61 15 chr2 13635921 13636498 -239620085 + LTR1B LTR ERV1 161 826 0 216 0 0 0 chr2 13636922 13636946 -239619637 + (TG)n Simple_repeat Simple_repeat 2 25 0 233 360 10 10 chr2 13637061 13637161 -239619422 + MLT1L LTR MaLR 432 531 -84 21 0 0 0 chr2 13639755 13639776 -239616807 + AT_rich Low_complexity Low_complexity 1 21 0 459 317 124 16 chr2 13639854 13640103 -239616480 + MER110-int LTR ERV1 159 434 -4213 255 164 60 30 chr2 13641862 13641929 -239614654 - MADE1 DNA Mariner -11 69 1 253 125 0 0 chr2 13643248 13643288 -239613295 - Alu SINE Alu -10 290 251 * 453 197 6 142 chr2 13643283 13643466 -239613117 - MER99 DNA DNA -478 350 193 1648 206 9 24 chr2 13643780 13644119 -239612464 - MLT1A1 LTR MaLR -13 352 19 353 259 89 51 chr2 13644126 13644284 -239612299 + MIR SINE MIR 91 254 -8 21 0 0 0 chr2 13644797 13644818 -239611765 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 13645036 13645065 -239611518 + AT_rich Low_complexity Low_complexity 1 29 0 650 248 100 19 chr2 13645127 13645337 -239611246 - MER89 LTR ERV1 -5 554 328 2974 151 41 12 chr2 13645341 13645927 -239610656 + MER4B LTR ERV1 1 769 -10 443 247 45 0 chr2 13645936 13646144 -239610439 - MER89 LTR ERV1 -233 326 11 22 80 0 0 chr2 13646280 13646330 -239610253 + AT_rich Low_complexity Low_complexity 1 50 0 3568 168 39 16 chr2 13646563 13647273 -239609310 - LTR8A LTR ERV1 0 727 1 42507 36 24 1 chr2 13647492 13653506 -239603077 - L1PA3 LINE L1 0 6155 1 197 126 87 10 chr2 13653852 13653955 -239602628 + (TA)n Simple_repeat Simple_repeat 1 111 0 287 347 57 0 chr2 13653988 13654112 -239602471 - L2 LINE L2 -2 3270 3140 1851 163 39 33 chr2 13654112 13654474 -239602109 + THE1B LTR MaLR 1 364 0 11009 117 10 0 chr2 13654474 13656038 -239600545 + THE1B-int LTR MaLR 1 1580 0 1643 181 47 33 chr2 13656038 13656397 -239600186 + THE1B LTR MaLR 1 364 0 436 146 101 0 chr2 13656426 13656515 -239600068 + MER4A LTR ERV1 1 98 -566 1788 107 161 83 chr2 13656515 13656888 -239599695 + MER4A LTR ERV1 261 662 -2 2477 121 72 34 chr2 13656893 13657440 -239599143 + MER4A-int LTR ERV1 1 612 -5986 385 143 0 43 chr2 13657434 13657504 -239599079 + MER4A-int LTR ERV1 733 799 -5799 * 311 137 0 0 chr2 13657574 13657625 -239598958 + MER4A-int LTR ERV1 836 886 -5712 * 1129 93 164 52 chr2 13657623 13657928 -239598655 + MER4A-int LTR ERV1 518 749 -4266 3908 97 55 21 chr2 13657960 13658630 -239597953 + MER4A-int LTR ERV1 1803 2495 -4103 1248 184 57 4 chr2 13658630 13658874 -239597709 - LTR8 LTR ERV1 -434 257 1 1159 133 0 9 chr2 13658874 13659092 -239597491 + MER4A-int LTR ERV1 2737 2952 -3646 25435 136 14 72 chr2 13659101 13664103 -239592480 + L1P LINE L1 11 4726 -1420 7336 28 1 0 chr2 13664103 13665001 -239591582 + L1PA3 LINE L1 5283 6183 0 373 208 0 0 chr2 13665001 13665073 -239591510 + MER4A-int LTR ERV1 2150 2221 -4537 215 59 0 29 chr2 13665078 13665112 -239591471 + (TA)n Simple_repeat Simple_repeat 2 34 0 6054 127 41 17 chr2 13665142 13666221 -239590362 + MER4A-int LTR ERV1 3921 5025 -1573 5553 120 63 34 chr2 13666223 13667233 -239589350 + MER4A-int LTR ERV1 5557 6596 -2 454 167 89 0 chr2 13667241 13667331 -239589252 + MER4A LTR ERV1 1 98 -566 1558 133 42 75 chr2 13667331 13667688 -239588895 + MER4A LTR ERV1 261 664 0 284 337 98 10 chr2 13668607 13668800 -239587783 + MIR SINE MIR 53 262 0 1177 251 85 6 chr2 13669434 13669764 -239586819 - MLT1A2 LTR MaLR 0 374 19 21 0 0 0 chr2 13670061 13670082 -239586501 + AT_rich Low_complexity Low_complexity 1 21 0 611 272 42 33 chr2 13670467 13670680 -239585903 + MIR SINE MIR 2 216 -46 356 330 115 18 chr2 13670703 13670921 -239585662 - L2 LINE L2 -70 3243 3005 217 267 42 91 chr2 13670928 13671093 -239585490 - L2 LINE L2 -520 2794 2638 322 214 179 0 chr2 13671445 13671529 -239585054 - L1MD2 LINE L1 -55 6304 6206 346 264 9 27 chr2 13671540 13671650 -239584933 - L1MD2 LINE L1 -214 6145 6038 871 213 51 94 chr2 13671660 13671765 -239584818 - L1M4 LINE L1 -3136 3010 2902 1117 210 90 26 chr2 13671765 13672108 -239584475 - MLT1A1 LTR MaLR 0 365 1 871 213 51 94 chr2 13672108 13672373 -239584210 - L1M4 LINE L1 -3244 2902 2656 466 271 135 35 chr2 13674085 13674373 -239582210 - MER110A LTR ERV1 -81 387 71 245 155 31 216 chr2 13675119 13675216 -239581367 - MLT1E2 LTR MaLR -537 89 11 2309 79 0 16 chr2 13675357 13675673 -239580910 - AluY SINE Alu 0 311 1 620 300 67 62 chr2 13675726 13676234 -239580349 + L1ME LINE L1 20 533 -5537 240 111 0 0 chr2 13676234 13676270 -239580313 + (CAT)n Simple_repeat Simple_repeat 2 37 0 620 300 67 62 chr2 13676270 13676328 -239580255 + L1ME LINE L1 533 589 -5481 2023 112 0 11 chr2 13676402 13676731 -239579852 + AluSx SINE Alu 1 326 0 1407 277 27 10 chr2 13676986 13677474 -239579109 + L1M4 LINE L1 3330 3825 -2321 849 248 128 24 chr2 13677551 13678136 -239578447 + L1ME LINE L1 2562 3207 -2873 1034 275 67 49 chr2 13678143 13678900 -239577683 + L1ME1 LINE L1 2785 3555 -2525 1001 266 105 6 chr2 13678902 13679225 -239577358 + L1ME1 LINE L1 3702 4056 -2024 1330 273 31 33 chr2 13679331 13679880 -239576703 + L1ME1 LINE L1 5550 6097 -3 2050 253 68 19 chr2 13682285 13683219 -239573364 + MER45B DNA AcHobo 33 1040 0 1174 240 0 91 chr2 13683215 13683557 -239573026 + MER77 LTR ERV1 1 311 -294 * 837 231 16 0 chr2 13683543 13683725 -239572858 + MER77 LTR ERV1 421 605 0 * 701 206 43 70 chr2 13683881 13684221 -239572362 - L1 LINE L1 -869 5277 4964 450 127 0 0 chr2 13684223 13684294 -239572289 + (TCC)n Simple_repeat Simple_repeat 3 73 0 794 245 51 15 chr2 13685209 13685405 -239571178 + L1MDa LINE L1 75 277 -6263 260 247 0 27 chr2 13685408 13685481 -239571102 + A-rich Low_complexity Low_complexity 2 72 0 9392 189 57 61 chr2 13685511 13685699 -239570884 - L1M4c LINE L1 -3899 2485 2298 1847 99 88 0 chr2 13685699 13685962 -239570621 - AluSq SINE Alu -13 300 15 372 62 0 0 chr2 13685962 13686010 -239570573 - Alu SINE Alu -252 48 1 9392 189 57 61 chr2 13686010 13688245 -239568338 - L1M4c LINE L1 -4084 2300 24 1771 91 4 8 chr2 13688322 13688563 -239568020 - AluSg/x SINE Alu -7 305 66 442 290 19 26 chr2 13688692 13688847 -239567736 + MIR SINE MIR 103 256 -6 437 287 20 20 chr2 13689121 13689365 -239567218 + L1MDa LINE L1 2188 2431 -4111 2228 65 0 49 chr2 13689667 13689974 -239566609 - AluY SINE Alu -19 292 1 288 188 0 0 chr2 13690576 13690624 -239565959 - LTR22A LTR ERVK 0 458 411 216 162 27 0 chr2 13691455 13691492 -239565091 - L2 LINE L2 -9 3304 3267 219 387 45 67 chr2 13691874 13692499 -239564084 - L2 LINE L2 -458 2856 2246 1522 191 33 60 chr2 13693616 13693982 -239562601 - MLT1B LTR MaLR 0 390 35 364 148 2 68 chr2 13694085 13694174 -239562409 + Alu SINE Alu 234 302 0 194 301 84 48 chr2 13695227 13695310 -239561273 + L2 LINE L2 3228 3313 0 185 280 80 50 chr2 13695998 13696098 -239560485 + L2 LINE L2 2753 2855 -459 2186 108 0 0 chr2 13696231 13696527 -239560056 - AluSp SINE Alu -11 302 7 186 43 0 0 chr2 13696888 13696911 -239559672 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 21 0 0 0 chr2 13697377 13697398 -239559185 + AT_rich Low_complexity Low_complexity 1 21 0 4297 156 38 7 chr2 13698034 13698799 -239557784 - Tigger3(Golem) DNA MER2_type -1 3028 2240 514 257 28 0 chr2 13698797 13698906 -239557677 - Tigger3(Golem) DNA MER2_type -2917 112 1 * 22 35 0 0 chr2 13698999 13699028 -239557555 + AT_rich Low_complexity Low_complexity 1 29 0 405 155 0 56 chr2 13701539 13701610 -239554973 - AluJ/FRAM SINE Alu -20 292 226 189 340 116 14 chr2 13701634 13701781 -239554802 - L2 LINE L2 -977 2337 2176 32 43 0 0 chr2 13701988 13702034 -239554549 + AT_rich Low_complexity Low_complexity 1 46 0 2658 259 83 12 chr2 13702425 13702999 -239553584 + L1MC1 LINE L1 4431 4963 -1370 2034 94 14 0 chr2 13702999 13703285 -239553298 + AluY SINE Alu 1 290 -21 2658 259 83 12 chr2 13703285 13704373 -239552210 + L1MC1 LINE L1 4963 6272 -61 2118 268 37 51 chr2 13704476 13706236 -239550347 + L1M4c LINE L1 23 1924 -4460 1517 210 35 24 chr2 13706409 13706780 -239549803 - MLT1-int LTR MaLR -45 1326 952 311 379 21 7 chr2 13706971 13707116 -239549467 + MIR SINE MIR 8 154 -108 258 336 62 34 chr2 13707649 13707795 -239548788 + MIR SINE MIR 20 169 -93 1021 249 62 24 chr2 13709292 13709629 -239546954 - L1MD2 LINE L1 -19 6340 5991 249 159 0 0 chr2 13709646 13709690 -239546893 - L1M4 LINE L1 -1588 4558 4515 11528 175 25 20 chr2 13709724 13710004 -239546579 - L1 LINE L1 -2646 4919 4642 2068 117 0 0 chr2 13710004 13710295 -239546288 - AluSc SINE Alu -18 291 1 11528 175 25 20 chr2 13710295 13713260 -239543323 - L1 LINE L1 -2923 4642 1688 30 45 0 0 chr2 13713376 13713420 -239543163 + AT_rich Low_complexity Low_complexity 1 44 0 184 375 0 11 chr2 13713862 13713950 -239542633 - MIR SINE MIR -122 140 54 1905 147 0 3 chr2 13714049 13714341 -239542242 + AluSq SINE Alu 2 292 -21 957 120 0 0 chr2 13714361 13714494 -239542089 + AluSg/x SINE Alu 169 301 -11 714 129 0 4 chr2 13716058 13716173 -239540410 - LTR12 LTR ERV1 0 714 175 306 263 20 10 chr2 13716175 13716274 -239540309 - LTR30 LTR ERV1 -79 643 544 579 213 155 24 chr2 13716274 13716481 -239540102 - LTR12 LTR ERV1 -437 277 44 227 209 0 0 chr2 13716481 13716524 -239540059 - LTR30 LTR ERV1 -679 43 1 367 307 49 79 chr2 13716599 13717065 -239539518 + L2 LINE L2 1938 2389 -925 223 350 56 49 chr2 13717088 13717231 -239539352 + L2 LINE L2 2551 2694 -620 1037 201 23 9 chr2 13717294 13717513 -239539070 + MLT1C LTR MaLR 3 224 -243 730 176 34 128 chr2 13717535 13717667 -239538916 + MER2 DNA MER2_type 8 116 -229 1852 125 3 26 chr2 13717667 13717970 -239538613 - AluSx SINE Alu -16 296 1 730 176 34 128 chr2 13717970 13718041 -239538542 + MER2 DNA MER2_type 116 192 -153 679 234 160 5 chr2 13718085 13718273 -239538310 + MLT1C LTR MaLR 250 466 -1 24 0 0 0 chr2 13720342 13720366 -239536217 + AT_rich Low_complexity Low_complexity 1 24 0 315 288 144 8 chr2 13720589 13720714 -239535869 + MIR SINE MIR 121 262 0 229 331 141 0 chr2 13721513 13721634 -239534949 - L2 LINE L2 -4 3309 3172 9162 31 1 1 chr2 13721678 13722781 -239533802 - L1PA3 LINE L1 -1909 4237 3135 9767 25 1 0 chr2 13722781 13724717 -239531866 + L1PA3 LINE L1 4223 6162 0 29 94 0 0 chr2 13724758 13724843 -239531740 + AT_rich Low_complexity Low_complexity 1 85 0 219 129 0 48 chr2 13726924 13726986 -239529597 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 989 208 11 0 chr2 13727116 13727299 -239529284 - MER5A DNA MER1_type -3 186 2 1627 181 178 6 chr2 13727452 13727817 -239528766 + MSTA LTR MaLR 1 428 0 216 287 69 23 chr2 13727848 13727935 -239528648 + MIR3 SINE MIR 64 154 -54 22 0 0 0 chr2 13728308 13728330 -239528253 + AT_rich Low_complexity Low_complexity 1 22 0 422 306 37 50 chr2 13728364 13728606 -239527977 + L2 LINE L2 3075 3313 0 225 0 0 0 chr2 13728692 13728717 -239527866 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 385 275 80 55 chr2 13729153 13729353 -239527230 + MIR SINE MIR 56 260 -2 208 333 16 0 chr2 13730186 13730249 -239526334 - L2 LINE L2 -3 3310 3247 1118 204 0 27 chr2 13730254 13730474 -239526109 - MER20 DNA MER1_type -5 214 1 246 351 38 15 chr2 13730686 13730817 -239525766 - MIR SINE MIR -6 256 123 1863 137 7 0 chr2 13730851 13731156 -239525427 + AluSg SINE Alu 1 307 0 22 0 0 0 chr2 13732268 13732290 -239524293 + AT_rich Low_complexity Low_complexity 1 22 0 195 309 16 81 chr2 13732415 13732538 -239524045 - L2 LINE L2 -209 3063 2949 369 320 109 0 chr2 13732678 13732853 -239523730 - MIR SINE MIR -27 235 42 1149 86 0 0 chr2 13733428 13733994 -239522589 + (TA)n Simple_repeat Simple_repeat 1 566 0 231 61 0 0 chr2 13734186 13734219 -239522364 + (TA)n Simple_repeat Simple_repeat 2 34 0 229 44 89 0 chr2 13734347 13734392 -239522191 + (TTATA)n Simple_repeat Simple_repeat 1 49 0 501 52 67 22 chr2 13734528 13734663 -239521920 + (TA)n Simple_repeat Simple_repeat 2 142 0 181 390 7 58 chr2 13734724 13734878 -239521705 + L2 LINE L2 2948 3093 -179 1344 213 49 47 chr2 13735027 13735462 -239521121 + MLT2D LTR ERVL 1 464 0 23 0 0 0 chr2 13735466 13735489 -239521094 + AT_rich Low_complexity Low_complexity 1 23 0 413 257 83 9 chr2 13735733 13735842 -239520741 + MIR SINE MIR 33 149 -59 324 0 0 0 chr2 13736885 13736921 -239519662 + (TTA)n Simple_repeat Simple_repeat 3 38 0 1511 165 37 77 chr2 13737104 13737566 -239519017 - MER67C LTR ERV1 -100 414 1 27 29 0 0 chr2 13737682 13737716 -239518867 + AT_rich Low_complexity Low_complexity 1 34 0 430 314 30 24 chr2 13738175 13738344 -239518239 - MIR SINE MIR -28 234 65 189 0 0 0 chr2 13738704 13738725 -239517858 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 22 56 0 0 chr2 13738981 13739017 -239517566 + AT_rich Low_complexity Low_complexity 1 36 0 213 328 33 66 chr2 13739021 13739143 -239517440 + MIR3 SINE MIR 67 184 -24 342 0 0 0 chr2 13739296 13739334 -239517249 + (TA)n Simple_repeat Simple_repeat 2 39 0 1330 197 66 138 chr2 13739386 13739888 -239516695 + MLT1E2 LTR MaLR 36 501 -125 247 240 37 51 chr2 13739910 13740012 -239516571 - MIR SINE MIR -56 206 106 514 204 9 4 chr2 13740056 13740170 -239516413 + MLT1D LTR MaLR 358 505 0 3688 151 27 3 chr2 13740210 13740840 -239515743 + L1PA13 LINE L1 5513 6157 -6 185 348 0 29 chr2 13740927 13740996 -239515587 + L2 LINE L2 3179 3245 -68 24 0 0 0 chr2 13742082 13742106 -239514477 + AT_rich Low_complexity Low_complexity 1 24 0 1512 162 16 67 chr2 13742445 13742759 -239513824 - AluJo SINE Alu -14 298 1 353 362 74 28 chr2 13742811 13743270 -239513313 - L1MEc LINE L1 -4789 1607 1128 198 236 0 0 chr2 13743279 13743334 -239513249 + (CATA)n Simple_repeat Simple_repeat 2 56 0 24 0 0 0 chr2 13743462 13743486 -239513097 + AT_rich Low_complexity Low_complexity 1 24 0 301 111 254 0 chr2 13743910 13743973 -239512610 + MADE1 DNA Mariner 2 80 0 254 295 92 30 chr2 13744053 13744358 -239512225 + L1ME3A LINE L1 4919 5242 -904 679 233 90 29 chr2 13744397 13744642 -239511941 + L1ME3A LINE L1 5898 6157 -13 217 221 26 13 chr2 13744790 13744867 -239511716 + (TA)n Simple_repeat Simple_repeat 1 78 0 446 79 13 26 chr2 13745129 13745205 -239511378 - L1PA11 LINE L1 -2749 3397 3323 * 11559 138 25 1 chr2 13745195 13747910 -239508673 + L1PA11 LINE L1 3399 6174 0 444 290 19 26 chr2 13748585 13748740 -239507843 + MIR SINE MIR 103 256 -6 23 0 0 0 chr2 13749106 13749129 -239507454 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr2 13749555 13749585 -239506998 + AT_rich Low_complexity Low_complexity 1 30 0 28 29 0 0 chr2 13749606 13749641 -239506942 + AT_rich Low_complexity Low_complexity 1 35 0 638 254 63 54 chr2 13749995 13750329 -239506254 + L1M4 LINE L1 2637 2973 -3173 204 206 0 0 chr2 13751972 13752006 -239504577 + (TTG)n Simple_repeat Simple_repeat 2 35 0 659 185 7 44 chr2 13752229 13752364 -239504219 - FLAM_C SINE Alu -3 130 1 2055 132 63 17 chr2 13752445 13752793 -239503790 + THE1B LTR MaLR 1 364 0 201 322 51 94 chr2 13752860 13753115 -239503468 + L2 LINE L2 2685 2928 -386 387 222 85 59 chr2 13753532 13753685 -239502898 + L1MEc LINE L1 43 199 -6197 546 113 0 0 chr2 13753898 13753978 -239502605 + MADE1 DNA Mariner 1 80 0 212 280 0 0 chr2 13754558 13754608 -239501975 - L2 LINE L2 -15 3298 3249 651 141 7 40 chr2 13754639 13754788 -239501795 + L1MA9 LINE L1 6169 6312 0 555 286 93 88 chr2 13754808 13755195 -239501388 - LTR41 LTR ERVL -6 767 375 368 282 27 18 chr2 13755195 13755305 -239501278 - MER81 DNA DNA 0 114 4 555 286 93 88 chr2 13755305 13755465 -239501118 - LTR41 LTR ERVL -398 375 217 430 290 47 31 chr2 13756448 13756641 -239499942 - MIR SINE MIR -15 247 52 353 299 51 16 chr2 13757001 13757255 -239499328 + L1ME LINE L1 5562 5824 -297 5674 143 13 7 chr2 13757296 13758484 -239498099 + L1PB1 LINE L1 4956 6149 -2 258 272 39 10 chr2 13758595 13758698 -239497885 - MER5C DNA MER1_type -1 323 218 222 234 287 0 chr2 13758724 13758818 -239497765 - MER5C DNA MER1_type -200 124 4 359 254 146 0 chr2 13759539 13759649 -239496934 + MLT1H1 LTR MaLR 37 162 -393 2589 183 19 10 chr2 13759766 13760247 -239496336 - LTR45B LTR ERV1 0 489 5 222 363 101 50 chr2 13760356 13761155 -239495428 + L2 LINE L2 2206 3053 -219 617 209 105 0 chr2 13761399 13761620 -239494963 + L1M4 LINE L1 5122 5363 -802 271 240 0 0 chr2 13761635 13761685 -239494898 - L1M4b LINE L1 -6797 62 13 205 182 45 0 chr2 13761869 13761913 -239494670 + T-rich Low_complexity Low_complexity 2 47 0 405 276 22 77 chr2 13762617 13762798 -239493785 - MIR SINE MIR -13 249 79 25 0 0 0 chr2 13764090 13764115 -239492468 + AT_rich Low_complexity Low_complexity 1 25 0 809 168 0 0 chr2 13764115 13764258 -239492325 - L1MA4 LINE L1 -9 6291 6149 1364 48 0 5 chr2 13764258 13764471 -239492112 - L1P3 LINE L1 -733 5439 5228 5240 53 12 0 chr2 13764471 13765130 -239491453 + L1PA8 LINE L1 5502 6172 0 8200 178 25 41 chr2 13765138 13767342 -239489241 + L1M1 LINE L1 16 2859 -4706 2302 138 3 3 chr2 13767333 13767702 -239488881 + L1MA3 LINE L1 5484 5852 -453 * 1133 122 5 70 chr2 13767696 13767872 -239488711 - L1M1 LINE L1 -487 5813 5652 * 2140 153 3 27 chr2 13767872 13768245 -239488338 - THE1B LTR MaLR 0 364 1 1133 122 5 70 chr2 13768245 13768281 -239488302 - L1M1 LINE L1 -648 5652 5615 462 327 48 24 chr2 13768400 13768648 -239487935 - MIR SINE MIR -1 261 8 1847 162 3 3 chr2 13769100 13769409 -239487174 + AluSx SINE Alu 1 309 -3 24 53 0 0 chr2 13770135 13770173 -239486410 + AT_rich Low_complexity Low_complexity 1 38 0 2206 81 3 17 chr2 13770705 13771003 -239485580 + AluY SINE Alu 1 294 -17 383 139 28 14 chr2 13771422 13771494 -239485089 - L1MB1 LINE L1 -1 6167 6095 777 133 0 21 chr2 13771494 13771637 -239484946 - L1MB1 LINE L1 -3 6165 6026 202 316 51 0 chr2 13772192 13772290 -239484293 - MIR SINE MIR -47 215 113 295 326 0 11 chr2 13772912 13773004 -239483579 - MLT1I LTR MaLR -305 104 14 956 300 58 40 chr2 13773294 13773848 -239482735 - L1ME LINE L1 -5380 690 127 297 231 42 106 chr2 13774339 13774647 -239481936 - MER110A LTR ERV1 -104 364 39 249 267 171 48 chr2 13777275 13777421 -239479162 + MIR SINE MIR 58 221 -41 1606 210 3 31 chr2 13777810 13778163 -239478420 + MER2 DNA MER2_type 2 344 0 385 244 8 34 chr2 13778635 13778754 -239477829 + MLT1K LTR MaLR 463 578 -10 2142 109 3 0 chr2 13778980 13779273 -239477310 + AluSx SINE Alu 1 294 -18 226 287 197 8 chr2 13779786 13779908 -239476675 - L2 LINE L2 -7 3306 3162 254 335 34 34 chr2 13781667 13781906 -239474677 + L1MEc LINE L1 692 930 -5466 7603 30 0 0 chr2 13781919 13783240 -239473343 + L1PA3 LINE L1 4875 6195 0 272 274 73 50 chr2 13783310 13783627 -239472956 + L1MEc LINE L1 952 1275 -4940 296 131 0 48 chr2 13783684 13783768 -239472815 + (TC)n Simple_repeat Simple_repeat 1 80 0 21 0 0 0 chr2 13785247 13785268 -239471315 + AT_rich Low_complexity Low_complexity 1 21 0 1159 269 180 27 chr2 13786102 13786652 -239469931 - MER76 LTR ERV -54 634 1 208 294 11 167 chr2 13787272 13787452 -239469131 - MIR SINE MIR -43 219 68 21 0 0 0 chr2 13787822 13787843 -239468740 + AT_rich Low_complexity Low_complexity 1 21 0 246 200 50 17 chr2 13788306 13788366 -239468217 + MIR SINE MIR 135 196 -66 3009 79 49 14 chr2 13788419 13788459 -239468124 - MLT2A1 LTR ERVL 0 444 407 252 59 0 0 chr2 13788459 13788493 -239468090 + (TA)n Simple_repeat Simple_repeat 2 35 0 3009 79 49 14 chr2 13788493 13788881 -239467702 - MLT2A1 LTR ERVL -37 407 1 228 352 134 32 chr2 13789452 13789796 -239466787 + L2 LINE L2 2444 2822 -492 2015 131 13 0 chr2 13790522 13790820 -239465763 + AluSx SINE Alu 6 307 -5 296 261 155 70 chr2 13793742 13793884 -239462699 + L2 LINE L2 3158 3311 -2 280 304 130 22 chr2 13793955 13794139 -239462444 + L2 LINE L2 1396 1599 -1715 241 306 82 53 chr2 13795027 13795197 -239461386 - MIR SINE MIR -18 244 70 1425 123 20 20 chr2 13795356 13795609 -239460974 - L1MA5A LINE L1 -2 6295 6043 26 93 0 0 chr2 13796016 13796091 -239460492 + AT_rich Low_complexity Low_complexity 1 75 0 2016 125 0 16 chr2 13796227 13796554 -239460029 + AluSx SINE Alu 1 322 0 264 207 46 23 chr2 13796732 13796819 -239459764 - L1MB7 LINE L1 -9 6175 6087 329 235 82 0 chr2 13797041 13797139 -239459444 - MIR SINE MIR -46 216 111 13763 179 37 24 chr2 13797185 13797328 -239459255 + L1MA3 LINE L1 18 158 -7566 5839 18 0 0 chr2 13797328 13798000 -239458583 + L1PA3 LINE L1 5481 6152 -3 13763 179 37 24 chr2 13798000 13805036 -239451547 + L1MA3 LINE L1 158 7724 0 677 316 179 12 chr2 13805198 13805701 -239450882 + L2 LINE L2 1777 2363 -951 195 162 0 0 chr2 13805893 13805930 -239450653 + CT-rich Low_complexity Low_complexity 2 38 0 238 281 74 66 chr2 13806205 13806326 -239450257 + L2 LINE L2 2362 2483 -831 1759 140 4 7 chr2 13806330 13806602 -239449981 - AluSx SINE Alu -6 306 36 2023 150 0 0 chr2 13806609 13806949 -239449634 - L1MA5 LINE L1 -2 6940 6601 742 182 0 27 chr2 13806949 13807097 -239449486 - L1MA5 LINE L1 -873 5915 5772 * 4377 227 55 30 chr2 13807096 13808517 -239448066 - L1MA5 LINE L1 -2488 4300 2844 2540 231 210 41 chr2 13808534 13809895 -239446688 - L1MA5 LINE L1 -3991 2798 1212 1683 304 55 25 chr2 13809985 13810619 -239445964 - L1MA5 LINE L1 -6132 657 5 251 374 103 33 chr2 13810678 13811363 -239445220 + L2 LINE L2 2554 3287 -26 9941 124 34 6 chr2 13811367 13811825 -239444758 + THE1C-int LTR MaLR 2 446 -1134 2011 133 3 0 chr2 13811825 13812119 -239444464 + AluSg SINE Alu 1 295 -15 9941 124 34 6 chr2 13812119 13813196 -239443387 + THE1C-int LTR MaLR 446 1580 0 1629 138 57 81 chr2 13813196 13813580 -239443003 + THE1C LTR MaLR 1 375 0 1113 205 12 101 chr2 13813977 13814313 -239442270 + MLT1E3 LTR MaLR 319 624 0 24 0 0 0 chr2 13814430 13814454 -239442129 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 13814908 13814929 -239441654 + AT_rich Low_complexity Low_complexity 1 21 0 351 78 0 0 chr2 13815477 13815528 -239441055 + (TG)n Simple_repeat Simple_repeat 1 51 0 273 296 0 0 chr2 13815705 13815786 -239440797 + MLT1A2 LTR MaLR 7 87 -287 * 352 148 0 0 chr2 13815784 13815838 -239440745 + MLT1A2 LTR MaLR 321 374 0 475 303 88 8 chr2 13816335 13816586 -239439997 - HAL1 LINE L1 -5 2502 2232 642 260 68 41 chr2 13816745 13816964 -239439619 - MIR SINE MIR -36 226 2 335 296 132 6 chr2 13816998 13817157 -239439426 - HAL1 LINE L1 -475 2032 1854 332 378 58 18 chr2 13817294 13817519 -239439064 - HAL1 LINE L1 -1594 913 680 587 271 28 11 chr2 13817651 13817828 -239438755 - MLT1A1 LTR MaLR 0 365 186 1548 256 59 18 chr2 13818010 13818635 -239437948 - L1M4 LINE L1 -1214 4932 4282 210 176 0 0 chr2 13818745 13818779 -239437804 + T-rich Low_complexity Low_complexity 1 34 0 376 198 22 44 chr2 13818779 13818961 -239437622 - L1M4 LINE L1 -2884 3262 3085 788 349 30 0 chr2 13819096 13819397 -239437186 - L2 LINE L2 -988 2326 2017 310 356 33 58 chr2 13819425 13819700 -239436883 + MLT1H1 LTR MaLR 31 298 -257 195 100 0 0 chr2 13819703 13819733 -239436850 + (TG)n Simple_repeat Simple_repeat 1 30 0 380 287 25 0 chr2 13819849 13819971 -239436612 - L1MEd LINE L1 -5993 126 2 251 289 70 9 chr2 13819982 13820096 -239436487 + MIR SINE MIR 87 207 -55 236 381 12 0 chr2 13821266 13821350 -239435233 - MIR SINE MIR -140 122 38 219 125 0 0 chr2 13821512 13821552 -239435031 + (TG)n Simple_repeat Simple_repeat 2 41 0 22 35 0 0 chr2 13822259 13822288 -239434295 + AT_rich Low_complexity Low_complexity 1 29 0 431 83 0 0 chr2 13822882 13822942 -239433641 + L1PBa LINE L1 1276 1335 -5528 219 288 64 56 chr2 13823131 13823256 -239433327 + MIR SINE MIR 31 156 -106 332 304 177 41 chr2 13823280 13823698 -239432885 - MLT1H LTR MaLR -2 547 73 215 253 107 0 chr2 13824348 13824423 -239432160 + MIR SINE MIR 47 129 -133 1177 158 113 25 chr2 13824482 13824722 -239431861 + MSTA LTR MaLR 1 261 -167 3023 40 3 3 chr2 13824722 13825093 -239431490 + L1PA3 LINE L1 4104 4474 -1672 7534 31 39 1 chr2 13825193 13826836 -239429747 + L1PA3 LINE L1 4472 6152 -3 971 121 145 0 chr2 13826866 13827032 -239429551 + MSTA LTR MaLR 239 428 0 2490 284 24 25 chr2 13827432 13828257 -239428326 + L1MB7 LINE L1 54 877 -5665 2394 244 29 39 chr2 13828256 13829113 -239427470 + L1MB7 LINE L1 4640 5488 -1156 * 283 215 46 15 chr2 13829113 13829243 -239427340 + (TTAAA)n Simple_repeat Simple_repeat 1 134 0 3516 196 51 6 chr2 13829243 13830151 -239426432 + L1MB7 LINE L1 5724 6674 -8 324 339 9 0 chr2 13830654 13830766 -239425817 + L2 LINE L2 2167 2279 -1035 181 217 0 43 chr2 13831513 13831559 -239425024 + MIR SINE MIR 152 195 -67 28 71 0 0 chr2 13833413 13833469 -239423114 + AT_rich Low_complexity Low_complexity 1 56 0 23 0 0 0 chr2 13833962 13833985 -239422598 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr2 13834555 13834580 -239422003 + AT_rich Low_complexity Low_complexity 1 25 0 666 111 0 10 chr2 13834595 13834694 -239421889 + MER4A LTR ERV1 1 98 -566 2341 114 2 96 chr2 13834694 13835140 -239421443 + MER4A LTR ERV1 261 664 0 248 325 88 31 chr2 13835311 13835471 -239421112 + MIR SINE MIR 13 181 -81 1771 174 18 0 chr2 13835481 13835814 -239420769 + L1MA4 LINE L1 5936 6274 -26 466 347 6 6 chr2 13836388 13836561 -239420022 - MER5B DNA MER1_type 0 178 6 2603 130 9 25 chr2 13836761 13837199 -239419384 + MER57B LTR ERV1 1 431 -3 4087 155 24 6 chr2 13837202 13837865 -239418718 + MER57B-int LTR ERV1 1 675 -6862 * 4164 174 49 15 chr2 13837859 13839212 -239417371 + MER57B-int LTR ERV1 288 1775 -4171 1114 101 10 8 chr2 13839199 13839372 -239417211 + MER57B-int LTR ERV1 1503 2017 -3929 * 254 91 68 0 chr2 13839348 13839392 -239417191 + MER57B-int LTR ERV1 2167 2213 -3733 * 14317 167 91 61 chr2 13839380 13841102 -239415481 + MER57B-int LTR ERV1 3336 5005 -2532 2189 90 0 13 chr2 13841102 13841403 -239415180 + AluSg SINE Alu 14 310 0 14317 167 91 61 chr2 13841403 13843386 -239413197 + MER57B-int LTR ERV1 5005 7151 -386 706 118 31 31 chr2 13843386 13843513 -239413070 + LTR54B LTR ERV1 5 131 -367 1436 121 121 0 chr2 13843513 13843744 -239412839 + MER57B-int LTR ERV1 7279 7537 0 2756 105 16 23 chr2 13843744 13844181 -239412402 + MER57B LTR ERV1 1 434 0 32 43 0 0 chr2 13844330 13844376 -239412207 + AT_rich Low_complexity Low_complexity 1 46 0 777 212 6 24 chr2 13844380 13844550 -239412033 + AluJo SINE Alu 5 171 -141 379 326 98 19 chr2 13844615 13845065 -239411518 - MLT2E LTR ERVL -74 554 42 433 280 83 38 chr2 13845142 13846095 -239410488 + L1ME3A LINE L1 5072 6090 -80 1933 49 23 102 chr2 13846185 13846515 -239410068 + AluY SINE Alu 1 306 0 244 307 88 18 chr2 13846740 13846854 -239409729 + L2 LINE L2 3015 3136 -177 775 257 5 0 chr2 13846874 13847061 -239409522 + Tigger6a DNA MER2_type 2 189 -894 * 2226 213 46 28 chr2 13847054 13847636 -239408947 + Tigger6a DNA MER2_type 425 1017 -66 985 331 110 49 chr2 13847826 13848606 -239407977 - L2 LINE L2 -431 2883 2031 5004 24 0 3 chr2 13848606 13849194 -239407389 + L1PA3 LINE L1 5570 6155 0 985 331 110 49 chr2 13849194 13849387 -239407196 - L2 LINE L2 -1283 2031 1851 330 224 8 24 chr2 13849395 13849520 -239407063 - L1MEc LINE L1 -4130 2266 2144 1801 203 129 27 chr2 13849521 13850039 -239406544 - L1MC3 LINE L1 -16 7769 7199 1243 254 40 55 chr2 13850027 13850574 -239406009 - L1M4 LINE L1 -1143 5003 4465 * 383 83 97 42 chr2 13850865 13850937 -239405646 + L1PB4 LINE L1 6074 6149 -7 22 0 0 0 chr2 13851155 13851177 -239405406 + AT_rich Low_complexity Low_complexity 1 22 0 193 300 60 40 chr2 13851318 13851418 -239405165 + MIR SINE MIR 10 111 -151 1743 261 63 54 chr2 13851802 13852237 -239404346 - L1ME1 LINE L1 -2 6164 5718 252 0 0 0 chr2 13852237 13852265 -239404318 + (TG)n Simple_repeat Simple_repeat 2 29 0 1743 261 63 54 chr2 13852265 13852591 -239403992 - L1ME1 LINE L1 -448 5718 5396 501 283 94 5 chr2 13852697 13852920 -239403663 - L1ME1 LINE L1 -748 5398 5156 687 206 70 45 chr2 13852925 13852987 -239403596 - L1ME1 LINE L1 -1435 4711 4652 1211 254 56 58 chr2 13852987 13853491 -239403092 - MLT1D LTR MaLR -2 503 1 687 206 70 45 chr2 13853491 13853714 -239402869 - L1ME1 LINE L1 -1494 4652 4419 215 260 0 41 chr2 13854110 13854183 -239402400 + CT-rich Low_complexity Low_complexity 4 73 0 22 99 0 0 chr2 13855803 13855874 -239400709 + AT_rich Low_complexity Low_complexity 1 71 0 21 36 0 0 chr2 13855982 13856010 -239400573 + AT_rich Low_complexity Low_complexity 1 28 0 203 375 23 16 chr2 13857620 13857748 -239398835 - L3 LINE CR1 -105 1472 1344 2378 58 0 55 chr2 13858076 13858401 -239398182 - AluY SINE Alu -4 307 1 21 0 0 0 chr2 13860107 13860128 -239396455 + AT_rich Low_complexity Low_complexity 1 21 0 203 311 9 9 chr2 13860159 13860265 -239396318 + (TA)n Simple_repeat Simple_repeat 2 107 0 234 211 0 0 chr2 13860265 13860317 -239396266 - L1MC4 LINE L1 -1339 6703 6652 193 355 27 0 chr2 13860384 13860494 -239396089 - MIR SINE MIR -110 152 40 4200 187 38 68 chr2 13861107 13861461 -239395122 - L1 LINE L1 -1055 5091 4728 7431 35 0 0 chr2 13861461 13862561 -239394022 - L1PA3 LINE L1 0 6155 5093 4200 187 38 68 chr2 13862561 13862857 -239393726 - L1 LINE L1 -1418 4728 4425 1882 156 7 3 chr2 13862857 13863164 -239393419 - AluSx SINE Alu 0 312 5 4200 187 38 68 chr2 13863164 13863643 -239392940 - L1 LINE L1 -1721 4425 3995 545 144 10 0 chr2 13863771 13863875 -239392708 + (CA)n Simple_repeat Simple_repeat 1 105 0 224 363 118 15 chr2 13864179 13864314 -239392269 + L2 LINE L2 3165 3313 0 29 0 0 0 chr2 13864460 13864489 -239392094 + AT_rich Low_complexity Low_complexity 1 29 0 217 281 31 0 chr2 13865097 13865161 -239391422 + MIR SINE MIR 76 141 -121 396 0 0 0 chr2 13865212 13865256 -239391327 + (CA)n Simple_repeat Simple_repeat 2 45 0 1657 195 10 0 chr2 13865269 13865576 -239391007 + AluJb SINE Alu 1 310 -2 6657 18 0 0 chr2 13866486 13867250 -239389333 - L1PA4 LINE L1 -8 6147 5384 5692 29 0 1 chr2 13867248 13867940 -239388643 + L1PA4 LINE L1 4704 5394 -752 * 240 315 0 22 chr2 13868339 13868431 -239388152 + GA-rich Low_complexity Low_complexity 3 92 0 2183 142 6 6 chr2 13869201 13869561 -239387022 + MER46B DNA MER2_type 2 236 0 226 264 73 36 chr2 13870210 13870320 -239386263 - MER103 DNA DNA -10 156 43 1606 199 3 7 chr2 13870328 13870620 -239385963 - AluJo SINE Alu -18 294 4 22 0 0 0 chr2 13871392 13871414 -239385169 + AT_rich Low_complexity Low_complexity 1 22 0 235 266 81 73 chr2 13872097 13872221 -239384362 - MIR SINE MIR -64 144 20 227 225 0 38 chr2 13872255 13872335 -239384248 + CT-rich Low_complexity Low_complexity 2 78 0 4256 160 16 27 chr2 13872362 13872692 -239383891 + L1PB4 LINE L1 5363 5695 -461 2115 110 3 0 chr2 13872692 13872992 -239383591 + AluSg SINE Alu 1 301 -9 4256 160 16 27 chr2 13872992 13873463 -239383120 + L1PB4 LINE L1 5695 6155 -1 2125 116 0 0 chr2 13873471 13873763 -239382820 + AluSx SINE Alu 1 292 -20 1316 273 113 20 chr2 13873780 13874601 -239381982 - L1MEc LINE L1 -3131 3084 2148 198 0 0 0 chr2 13874601 13874623 -239381960 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1316 273 113 20 chr2 13874623 13874940 -239381643 - L1MEc LINE L1 -4067 2148 1862 362 175 62 0 chr2 13874958 13875038 -239381545 - L1MB4 LINE L1 0 6180 6096 1068 153 0 0 chr2 13875153 13875339 -239381244 - AluSq SINE Alu 0 314 129 26 88 0 0 chr2 13875908 13875976 -239380607 + AT_rich Low_complexity Low_complexity 1 68 0 260 312 0 32 chr2 13876501 13876594 -239379989 + MIR3 SINE MIR 67 156 -52 6394 220 41 20 chr2 13876853 13879810 -239376773 - L1MA4 LINE L1 -6 7713 4658 1766 236 42 33 chr2 13879816 13880637 -239375946 - L1MA4 LINE L1 -3726 3839 3015 842 265 58 22 chr2 13880621 13881032 -239375551 - L1MEc LINE L1 -2786 3429 3004 * 4064 198 20 70 chr2 13881047 13881964 -239374619 + L1MA9 LINE L1 4874 5690 -622 336 24 0 0 chr2 13881964 13882005 -239374578 + (CA)n Simple_repeat Simple_repeat 2 42 0 4064 198 20 70 chr2 13882005 13882599 -239373984 + L1MA9 LINE L1 5690 6312 0 34 0 0 0 chr2 13882603 13882637 -239373946 + AT_rich Low_complexity Low_complexity 1 34 0 789 307 83 30 chr2 13882641 13883343 -239373240 - L1MEc LINE L1 -4591 1805 1041 2274 105 0 0 chr2 13883343 13883648 -239372935 - AluSx SINE Alu -7 305 1 789 307 83 30 chr2 13883648 13883867 -239372716 - L1MEc LINE L1 -5355 1041 835 386 367 52 39 chr2 13883955 13884413 -239372170 - L1MEc LINE L1 -5711 685 222 28 0 0 0 chr2 13884603 13884631 -239371952 + AT_rich Low_complexity Low_complexity 1 28 0 227 299 188 0 chr2 13885188 13885305 -239371278 + MIR SINE MIR 35 173 -89 2368 72 0 0 chr2 13886202 13886508 -239370075 - AluY SINE Alu -5 306 1 198 320 39 68 chr2 13887276 13887379 -239369204 + MIR3 SINE MIR 15 114 -94 2297 44 17 7 chr2 13887414 13887708 -239368875 + AluY SINE Alu 1 297 -14 239 305 145 15 chr2 13888018 13888149 -239368434 - L2 LINE L2 -8 3305 3158 332 319 0 0 chr2 13888158 13888249 -239368334 + L1MC4 LINE L1 6613 6703 -1339 * 359 289 0 0 chr2 13888169 13888259 -239368324 - L1MC4 LINE L1 -1339 6703 6614 696 269 152 63 chr2 13888277 13888431 -239368152 - L2 LINE L2 -134 3179 3040 1819 112 29 4 chr2 13888431 13888707 -239367876 - AluSx SINE Alu -17 295 13 696 269 152 63 chr2 13888707 13889110 -239367473 - L2 LINE L2 -273 3040 2608 422 319 70 14 chr2 13890234 13890447 -239366136 - MLT1G LTR MaLR -12 578 354 359 297 17 80 chr2 13890725 13890900 -239365683 - L2 LINE L2 -4 3309 3146 744 337 239 22 chr2 13891019 13892157 -239364426 - L2 LINE L2 -339 2975 1591 2163 102 6 6 chr2 13892354 13892667 -239363916 + AluSp SINE Alu 1 313 0 438 126 133 106 chr2 13893026 13893177 -239363406 - L1MA4 LINE L1 0 6300 6146 24 0 0 70 chr2 13893804 13893847 -239362736 + AT_rich Low_complexity Low_complexity 1 40 0 21 36 0 0 chr2 13893876 13893904 -239362679 + AT_rich Low_complexity Low_complexity 1 28 0 229 307 0 0 chr2 13893917 13894005 -239362578 - L1M4 LINE L1 -1439 4707 4620 654 285 35 59 chr2 13894589 13894845 -239361738 + MIR SINE MIR 13 262 0 24 0 0 0 chr2 13896755 13896779 -239359804 + AT_rich Low_complexity Low_complexity 1 24 0 763 225 221 28 chr2 13896797 13896957 -239359626 + L1MC5 LINE L1 6693 6821 -1140 2005 110 7 21 chr2 13896957 13897248 -239359335 + AluSq SINE Alu 1 287 -26 763 225 221 28 chr2 13897248 13897545 -239359038 + L1MC5 LINE L1 6821 7238 -723 255 114 0 0 chr2 13900512 13900556 -239356027 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 410 181 0 0 chr2 13900815 13900898 -239355685 - AluJ/FRAM SINE Alu -9 303 221 1905 156 33 33 chr2 13902168 13902502 -239354081 - MER1B DNA MER1_type -5 334 1 388 284 24 8 chr2 13902752 13902879 -239353704 - HsTC2 DNA Tc2 0 1900 1772 442 284 27 7 chr2 13903044 13903192 -239353391 - HsTC2 DNA Tc2 -217 1681 1531 468 315 0 0 chr2 13903396 13903523 -239353060 - HsTC2 DNA Tc2 -1750 148 22 21 0 0 0 chr2 13903878 13903899 -239352684 + AT_rich Low_complexity Low_complexity 1 21 0 604 194 45 8 chr2 13904118 13904252 -239352331 - MIR SINE MIR 0 262 124 229 375 14 28 chr2 13904344 13904488 -239352095 + MIR SINE MIR 3 144 -118 3558 280 103 14 chr2 13904494 13904917 -239351666 + L1PB1 LINE L1 5 389 -5752 216 0 0 0 chr2 13904917 13904941 -239351642 + (GA)n Simple_repeat Simple_repeat 2 25 0 3558 280 103 14 chr2 13904941 13905772 -239350811 + L1PB1 LINE L1 389 1371 -4770 408 280 59 72 chr2 13905774 13905933 -239350650 + FAM SINE Alu 1 149 -26 344 254 0 9 chr2 13905947 13906057 -239350526 + L1PB1 LINE L1 1391 1499 -4642 2388 136 14 0 chr2 13906059 13906413 -239350170 - THE1B LTR MaLR 0 364 6 9438 120 66 12 chr2 13906418 13907917 -239348666 - THE1B-int LTR MaLR 0 1580 1 2336 127 25 6 chr2 13907919 13908274 -239348309 - THE1B LTR MaLR -2 362 1 492 230 62 82 chr2 13908296 13908477 -239348106 + L1PB1 LINE L1 1504 1670 -4519 * 5003 219 11 12 chr2 13908473 13909694 -239346889 - L1PB1 LINE L1 -1871 4339 3121 * 5278 171 22 32 chr2 13909690 13909945 -239346638 + L1PB1 LINE L1 4359 4615 -1600 1888 148 67 17 chr2 13909945 13910302 -239346281 + THE1C LTR MaLR 1 375 0 5278 171 22 32 chr2 13910302 13911924 -239344659 + L1PB1 LINE L1 4615 6215 0 1450 262 81 46 chr2 13911990 13912213 -239344370 + L1MA9 LINE L1 2690 2904 -4661 989 196 5 0 chr2 13912213 13912427 -239344156 + L1MA4 LINE L1 6077 6291 -9 1450 262 81 46 chr2 13912427 13913327 -239343256 + L1MA9 LINE L1 2904 3848 -3717 4644 62 13 0 chr2 13913334 13913932 -239342651 + L1PA7 LINE L1 5548 6153 -1 9456 210 38 57 chr2 13914322 13915710 -239340873 + L1MA9 LINE L1 3842 5256 -2475 272 235 0 0 chr2 13915710 13915761 -239340822 + MLT1A1 LTR MaLR 52 102 -263 9456 210 38 57 chr2 13915761 13917643 -239338940 + L1MA9 LINE L1 5256 7090 -641 2156 204 51 8 chr2 13917659 13917981 -239338602 + L1MA9 LINE L1 7195 7549 -182 240 35 0 0 chr2 13917981 13918010 -239338573 + (TA)n Simple_repeat Simple_repeat 2 30 0 2156 204 51 8 chr2 13918010 13918201 -239338382 + L1MA9 LINE L1 7549 7730 -1 283 246 59 51 chr2 13918383 13918501 -239338082 + MIR SINE MIR 33 151 -111 244 245 0 20 chr2 13920309 13920407 -239336176 + (TA)n Simple_repeat Simple_repeat 2 97 0 278 314 31 38 chr2 13920642 13920801 -239335782 + MIR SINE MIR 104 261 -1 21 0 0 0 chr2 13920806 13920827 -239335756 + AT_rich Low_complexity Low_complexity 1 21 0 506 205 76 15 chr2 13921222 13921358 -239335225 + L1ME1 LINE L1 5783 5906 -260 1525 228 0 3 chr2 13921371 13921678 -239334905 + MLT1A1 LTR MaLR 60 365 0 799 236 25 21 chr2 13921679 13921916 -239334667 + L1ME1 LINE L1 5913 6150 -16 334 235 12 148 chr2 13922332 13922494 -239334089 - MIR SINE MIR -103 159 20 738 301 125 21 chr2 13923020 13923356 -239333227 + MER45C DNA AcHobo 4 374 -579 374 237 13 0 chr2 13923499 13923575 -239333008 + MER45C DNA AcHobo 877 953 0 22 0 0 0 chr2 13924084 13924106 -239332477 + AT_rich Low_complexity Low_complexity 1 22 0 376 162 0 0 chr2 13924109 13924183 -239332400 - L1MA5 LINE L1 0 6300 6227 317 137 0 0 chr2 13924197 13924248 -239332335 + L1MA5 LINE L1 6035 6085 -215 719 290 35 5 chr2 13924298 13924498 -239332085 - MIR SINE MIR -37 225 20 4904 162 23 59 chr2 13924578 13925688 -239330895 - MER11C LTR ERVK 0 1071 1 1087 142 64 37 chr2 13925688 13925906 -239330677 + LTR51 LTR ERV1 8 231 -440 470 275 99 28 chr2 13925971 13926182 -239330401 - MIR SINE MIR -13 249 24 428 287 82 0 chr2 13926293 13926415 -239330168 - MER63 DNA MER1_type -78 758 1 630 101 0 0 chr2 13926611 13926720 -239329863 + (G)n Simple_repeat Simple_repeat 1 109 0 223 269 10 29 chr2 13926720 13926824 -239329759 + G-rich Low_complexity Low_complexity 1 102 0 1980 213 161 41 chr2 13927086 13927767 -239328816 - LTR1B LTR ERV1 -75 751 1 21 57 0 0 chr2 13928060 13928095 -239328488 + AT_rich Low_complexity Low_complexity 1 35 0 3043 68 3 3 chr2 13928155 13928537 -239328046 - MLT2A1 LTR ERVL -62 382 1 609 247 80 65 chr2 13928641 13928965 -239327618 + L1ME1 LINE L1 3794 4122 -2024 5806 32 0 1 chr2 13928965 13929651 -239326932 + L1PA3 LINE L1 5468 6152 -3 327 242 189 14 chr2 13929714 13929995 -239326588 + L1ME1 LINE L1 4114 4443 -1703 * 431 190 74 25 chr2 13929979 13930100 -239326483 + L1MA9 LINE L1 6161 6287 -25 * 478 260 40 77 chr2 13930098 13930323 -239326260 + L1ME1 LINE L1 4422 4633 -1513 1834 108 3 35 chr2 13930323 13930637 -239325946 + AluSx SINE Alu 4 307 -5 478 260 40 77 chr2 13930637 13930738 -239325845 + L1ME1 LINE L1 4633 4736 -1410 1250 284 38 30 chr2 13930766 13931586 -239324997 + L1ME1 LINE L1 5004 5843 -323 411 314 223 18 chr2 13931815 13932433 -239324150 - L2 LINE L2 -767 2547 1803 237 314 70 29 chr2 13933422 13933594 -239322989 - MIR SINE MIR -47 215 37 201 293 0 0 chr2 13933898 13933956 -239322627 + (TGAA)n Simple_repeat Simple_repeat 4 61 0 1555 139 0 0 chr2 13935056 13935286 -239321297 - AluSq SINE Alu -83 230 1 217 318 187 0 chr2 13935895 13936002 -239320581 + L2 LINE L2 2915 3041 -272 355 240 67 95 chr2 13936004 13936183 -239320400 - MLT1E2 LTR MaLR -238 267 91 310 189 32 63 chr2 13936194 13936289 -239320294 - L1MC4 LINE L1 -1339 6703 6612 296 18 0 70 chr2 13936289 13936346 -239320237 + (TA)n Simple_repeat Simple_repeat 2 54 0 349 194 0 122 chr2 13936364 13936462 -239320121 - MLT1E2 LTR MaLR -540 86 1 711 209 0 0 chr2 13936511 13936626 -239319957 - FLAM_A SINE Alu -18 115 1 191 146 24 0 chr2 13936654 13936695 -239319888 + (TCTA)n Simple_repeat Simple_repeat 4 45 0 1060 233 124 18 chr2 13937281 13937676 -239318907 + L1ME LINE L1 323 759 -5311 601 221 0 27 chr2 13937747 13937896 -239318687 - L1 LINE L1 -1455 4691 4547 1521 246 72 17 chr2 13940236 13940655 -239315928 - MLT1F LTR MaLR -30 512 71 555 94 250 0 chr2 13940675 13940771 -239315812 - THE1B-int LTR MaLR -1460 120 1 2069 120 50 36 chr2 13940779 13941136 -239315447 - THE1B LTR MaLR 0 364 3 261 319 0 0 chr2 13941138 13941210 -239315373 - MLT1F LTR MaLR -467 75 4 5350 72 7 1 chr2 13941416 13942125 -239314458 + L1PA7 LINE L1 5424 6136 -18 3991 203 30 18 chr2 13944345 13945642 -239310941 - L1MB8 LINE L1 -6 6172 4858 36 62 0 0 chr2 13945802 13945866 -239310717 + AT_rich Low_complexity Low_complexity 1 64 0 501 188 30 0 chr2 13946374 13946475 -239310108 + MLT1J LTR MaLR 72 175 -336 213 39 0 0 chr2 13946584 13946610 -239309973 + (GA)n Simple_repeat Simple_repeat 1 26 0 485 222 40 16 chr2 13946610 13946736 -239309847 + L1MC4 LINE L1 7913 8041 -1 1764 288 83 19 chr2 13946840 13947036 -239309547 - L1MC4a LINE L1 -7 7801 7619 2077 109 0 50 chr2 13947036 13947357 -239309226 - AluSx SINE Alu -5 307 3 1764 288 83 19 chr2 13947357 13947963 -239308620 - L1MC4a LINE L1 -189 7619 6947 29 28 0 0 chr2 13949192 13949228 -239307355 + AT_rich Low_complexity Low_complexity 1 36 0 210 196 20 0 chr2 13949551 13949602 -239306981 + T-rich Low_complexity Low_complexity 3 54 0 1816 136 47 17 chr2 13949815 13950116 -239306467 + AluSx SINE Alu 3 312 0 22 0 0 0 chr2 13950234 13950256 -239306327 + AT_rich Low_complexity Low_complexity 1 22 0 257 346 165 16 chr2 13951381 13951624 -239304959 + L2 LINE L2 1168 1446 -1868 428 246 331 0 chr2 13951693 13951835 -239304748 - MER5A DNA MER1_type 0 189 1 452 346 61 65 chr2 13952019 13952836 -239303747 + L2 LINE L2 1758 2571 -743 751 316 101 72 chr2 13952951 13953662 -239302921 - L1MEd LINE L1 -4890 1229 493 2211 105 0 3 chr2 13953662 13953966 -239302617 + AluSg SINE Alu 1 303 -7 751 316 101 72 chr2 13953966 13954017 -239302566 - L1MEd LINE L1 -5626 493 445 260 357 0 0 chr2 13954085 13954169 -239302414 + L2 LINE L2 3227 3310 -3 454 66 13 13 chr2 13954745 13954821 -239301762 + (TA)n Simple_repeat Simple_repeat 1 76 0 800 263 216 11 chr2 13955188 13955549 -239301034 - LTR33A LTR ERVL 0 523 89 256 91 0 36 chr2 13956140 13956195 -239300388 + (TA)n Simple_repeat Simple_repeat 2 54 0 2079 162 25 133 chr2 13956321 13956950 -239299633 - L1MC3 LINE L1 0 7785 7225 515 238 0 0 chr2 13956953 13957075 -239299508 - L1MC3 LINE L1 -693 7092 6971 34 0 0 0 chr2 13957076 13957110 -239299473 + AT_rich Low_complexity Low_complexity 1 34 0 264 266 81 16 chr2 13957121 13957245 -239299338 - L1ME LINE L1 -435 5686 5555 212 291 158 9 chr2 13958363 13958473 -239298110 + MIR SINE MIR 30 154 -54 203 254 32 16 chr2 13960076 13960139 -239296444 + MIR SINE MIR 91 154 -108 186 87 65 0 chr2 13960509 13960555 -239296028 + (TA)n Simple_repeat Simple_repeat 2 50 0 22 0 0 0 chr2 13961984 13962006 -239294577 + AT_rich Low_complexity Low_complexity 1 22 0 1622 123 54 19 chr2 13962144 13962405 -239294178 - AluSx SINE Alu -18 294 25 1305 284 38 30 chr2 13962564 13963384 -239293199 - L1ME1 LINE L1 -323 5777 4938 490 222 43 184 chr2 13963410 13963513 -239293070 - L1ME1 LINE L1 -1408 4672 4556 2110 115 0 3 chr2 13963513 13963818 -239292765 - AluSx SINE Alu -5 307 4 490 222 43 184 chr2 13963818 13964490 -239292093 - L1ME1 LINE L1 -1524 4556 4096 5813 32 0 0 chr2 13964490 13965175 -239291408 - L1PA3 LINE L1 -3 6152 5468 490 222 43 184 chr2 13965175 13965499 -239291084 - L1ME1 LINE L1 -1984 4096 3728 3021 68 3 3 chr2 13965603 13965985 -239290598 + MLT2A1 LTR ERVL 1 382 -62 1221 305 60 56 chr2 13965985 13967667 -239288916 - L1ME1 LINE L1 -4485 1776 57 900 256 98 14 chr2 13967717 13968064 -239288519 - L1M4 LINE L1 -1745 4401 4026 438 254 113 11 chr2 13968048 13968225 -239288358 - L1MEc LINE L1 -3696 2519 2325 * 1443 285 42 63 chr2 13968275 13969408 -239287175 - L1MEc LINE L1 -4842 1554 445 7383 164 18 11 chr2 13969432 13970064 -239286519 + HSMAR2 DNA Mariner 2 628 -674 1223 113 24 38 chr2 13970064 13970277 -239286306 - L1PA15 LINE L1 -3 6162 5953 7383 164 18 11 chr2 13970277 13970935 -239285648 + HSMAR2 DNA Mariner 628 1301 -1 869 176 11 27 chr2 13970979 13971167 -239285416 - L1MA7 LINE L1 -178 6113 5929 692 124 55 7 chr2 13971167 13971304 -239285279 + L1MA7 LINE L1 6132 6283 -8 1854 151 7 7 chr2 13972248 13972569 -239284014 + AluSx SINE Alu 2 312 0 207 167 0 0 chr2 13972800 13972836 -239283747 - MER5B DNA MER1_type -8 170 135 514 304 27 41 chr2 13973094 13973314 -239283269 + MIR SINE MIR 2 218 -44 2208 212 47 8 chr2 13973869 13974397 -239282186 + L1MB8 LINE L1 5624 6172 -6 347 298 48 0 chr2 13974629 13974753 -239281830 - MLT1G1 LTR MaLR 0 595 466 289 310 0 11 chr2 13975453 13975540 -239281043 + L2 LINE L2 3228 3313 0 321 15 75 15 chr2 13975637 13975704 -239280879 + (TA)n Simple_repeat Simple_repeat 2 72 0 803 244 157 37 chr2 13975755 13976132 -239280451 - MSTB LTR MaLR -4 422 1 183 156 0 0 chr2 13976822 13976854 -239279729 + (TATATG)n Simple_repeat Simple_repeat 6 37 0 4537 119 9 4 chr2 13976897 13977588 -239278995 + L1PA10 LINE L1 4730 6162 -1 4537 110 11 0 chr2 13977588 13978245 -239278338 + L1PA10 LINE L1 5504 6167 -1 593 264 53 94 chr2 13978247 13978702 -239277881 + L1MEc LINE L1 1533 1968 -4428 444 303 57 84 chr2 13978767 13979243 -239277340 + L1MEc LINE L1 1749 2211 -4185 267 217 0 0 chr2 13979252 13979312 -239277271 + (CATA)n Simple_repeat Simple_repeat 2 61 0 1786 250 36 7 chr2 13979433 13979992 -239276591 + L1MB8 LINE L1 4477 5051 -1095 301 192 6 84 chr2 13980013 13980180 -239276403 + (TA)n Simple_repeat Simple_repeat 1 154 0 3191 216 44 22 chr2 13980230 13980822 -239275761 + L1MB8 LINE L1 5126 5753 -425 1559 183 3 7 chr2 13980822 13981155 -239275428 + AluJb SINE Alu 1 332 0 3191 216 44 22 chr2 13981155 13981556 -239275027 + L1MB8 LINE L1 5753 6144 -34 377 222 68 17 chr2 13981569 13981686 -239274897 + L1M4 LINE L1 5616 5738 -440 261 86 0 0 chr2 13981687 13981722 -239274861 + AluSp SINE Alu 136 170 -133 574 263 75 22 chr2 13981737 13982001 -239274582 - L1M4 LINE L1 -432 5742 5468 232 414 39 0 chr2 13982101 13982205 -239274378 - L2 LINE L2 -4 3268 3161 1123 219 19 4 chr2 13984042 13984307 -239272276 - L1MB8 LINE L1 -191 5987 5719 22 0 0 0 chr2 13984468 13984490 -239272093 + AT_rich Low_complexity Low_complexity 1 22 0 313 24 24 0 chr2 13985064 13985105 -239271478 + MADE1 DNA Mariner 2 43 -37 496 302 64 42 chr2 13985135 13985400 -239271183 + MLT1K LTR MaLR 306 576 -12 28 48 0 0 chr2 13985942 13985984 -239270599 + AT_rich Low_complexity Low_complexity 1 42 0 235 267 0 27 chr2 13986066 13986141 -239270442 + (TATG)n Simple_repeat Simple_repeat 4 76 0 465 231 41 0 chr2 13986173 13986294 -239270289 + L1ME1 LINE L1 6016 6141 -25 181 281 188 10 chr2 13986787 13986883 -239269700 + MIR SINE MIR 133 245 -17 * 269 286 0 44 chr2 13986881 13986972 -239269611 - MIR SINE MIR -115 147 61 1954 132 0 0 chr2 13987362 13987680 -239268903 + AluSg SINE Alu 3 320 0 181 196 36 0 chr2 13987758 13987814 -239268769 + CT-rich Low_complexity Low_complexity 4 61 0 214 215 31 54 chr2 13988280 13988410 -239268173 + (TAAA)n Simple_repeat Simple_repeat 2 128 0 25 65 0 0 chr2 13988452 13988498 -239268085 + AT_rich Low_complexity Low_complexity 1 46 0 21 57 0 0 chr2 13989395 13989430 -239267153 + AT_rich Low_complexity Low_complexity 1 35 0 30 0 0 0 chr2 13989505 13989535 -239267048 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr2 13989554 13989576 -239267007 + AT_rich Low_complexity Low_complexity 1 22 0 1435 179 195 8 chr2 13990111 13990490 -239266093 + LTR47A LTR ERVL 1 450 -2 991 140 7 0 chr2 13990828 13990971 -239265612 + AluSq SINE Alu 145 288 -25 584 273 82 62 chr2 13991537 13991793 -239264790 - MIR SINE MIR 0 262 2 2467 66 0 0 chr2 13991932 13992237 -239264346 - AluY SINE Alu -6 305 1 474 270 112 18 chr2 13992439 13992635 -239263948 + MLT1H1 LTR MaLR 32 213 -329 318 289 44 14 chr2 13992946 13993215 -239263368 - L1MCa LINE L1 -4938 1669 1194 426 264 26 80 chr2 13993601 13993912 -239262671 - HAL1b LINE L1 -45 1303 1010 22 35 0 0 chr2 13993933 13993962 -239262621 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 13994115 13994136 -239262447 + AT_rich Low_complexity Low_complexity 1 21 0 1822 110 0 0 chr2 13994193 13994448 -239262135 - AluSx SINE Alu 0 312 58 225 0 0 0 chr2 13994482 13994507 -239262076 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 181 244 0 0 chr2 13994974 13995015 -239261568 - L2 LINE L2 -9 3304 3264 275 140 34 39 chr2 13996869 13997048 -239259535 + (TA)n Simple_repeat Simple_repeat 2 179 0 243 184 29 39 chr2 13997061 13997164 -239259419 + (TA)n Simple_repeat Simple_repeat 2 103 0 472 212 29 29 chr2 13997431 13997568 -239259015 + L1M4b LINE L1 1353 1489 -5370 398 228 133 128 chr2 13997611 13997996 -239258587 - MLT2B1 LTR ERVL 0 520 135 227 207 43 129 chr2 13998127 13998267 -239258316 + L2 LINE L2 3088 3215 -98 1343 174 0 5 chr2 13998298 13998522 -239258061 - AluJb SINE Alu -5 307 85 260 369 0 0 chr2 13998526 13998610 -239257973 + L2 LINE L2 3189 3272 0 285 75 0 0 chr2 13999099 13999139 -239257444 + (TG)n Simple_repeat Simple_repeat 1 40 0 254 372 32 0 chr2 14000548 14000642 -239255941 - MIR SINE MIR -145 117 21 229 333 155 0 chr2 14001293 14001422 -239255161 + MIR3 SINE MIR 43 191 -17 713 272 5 0 chr2 14001471 14001673 -239254910 + MER3 DNA MER1_type 2 204 -5 229 316 158 11 chr2 14001784 14001879 -239254704 + MIR3 SINE MIR 9 117 -91 553 306 70 8 chr2 14001918 14002160 -239254423 + L1M4 LINE L1 9 265 -6277 15060 143 16 101 chr2 14002366 14005767 -239250816 + L1PA7 LINE L1 12 3122 -3024 11894 90 5 0 chr2 14005767 14005832 -239250751 + L1PA7 LINE L1 3606 3669 -2485 354 23 0 0 chr2 14005832 14005875 -239250708 + (CA)n Simple_repeat Simple_repeat 2 44 0 11894 90 5 0 chr2 14005875 14008292 -239248291 + L1PA7 LINE L1 3669 6151 -3 24 0 0 0 chr2 14008292 14008316 -239248267 + AT_rich Low_complexity Low_complexity 1 24 0 1125 274 3 8 chr2 14008418 14008791 -239247792 + L1M4 LINE L1 2635 3005 -3639 * 1748 203 104 10 chr2 14008787 14009295 -239247288 + L1M4 LINE L1 829 1384 -5158 1158 137 16 143 chr2 14009307 14009622 -239246961 + L1MA9 LINE L1 6038 6312 0 1684 246 40 71 chr2 14009666 14010242 -239246341 + L1M4 LINE L1 2539 3131 -3513 183 80 0 0 chr2 14010242 14010267 -239246316 + (TG)n Simple_repeat Simple_repeat 2 26 0 1684 246 40 71 chr2 14010267 14010732 -239245851 + L1M4 LINE L1 3131 3545 -3099 2203 106 0 10 chr2 14010732 14011035 -239245548 - AluSc SINE Alu -5 304 5 1684 246 40 71 chr2 14011035 14011077 -239245506 + L1M4 LINE L1 3545 3587 -3057 468 387 11 7 chr2 14011077 14011338 -239245245 - L2 LINE L2 -301 3012 2753 2051 207 20 4 chr2 14011830 14012323 -239244260 - L1 LINE L1 -2205 3941 3441 * 2413 220 7 19 chr2 14012313 14012853 -239243730 + L1MA9 LINE L1 5630 6163 -149 862 239 37 0 chr2 14012861 14013049 -239243534 + AluJo SINE Alu 95 289 -23 622 205 35 19 chr2 14013053 14013368 -239243215 + GA-rich Low_complexity Low_complexity 1 320 0 311 250 0 0 chr2 14013387 14013463 -239243120 + L1MA10 LINE L1 6183 6258 -76 481 291 7 27 chr2 14014023 14014171 -239242412 + MIR SINE MIR 7 151 -111 25 51 0 0 chr2 14014196 14014235 -239242348 + AT_rich Low_complexity Low_complexity 1 39 0 2200 81 0 3 chr2 14014536 14014856 -239241727 - AluY SINE Alu 0 319 1 23 0 0 0 chr2 14015588 14015611 -239240972 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr2 14015954 14015978 -239240605 + AT_rich Low_complexity Low_complexity 1 24 0 236 317 18 72 chr2 14016990 14017157 -239239426 + MIR SINE MIR 82 239 -23 2243 93 0 22 chr2 14017173 14017486 -239239097 - AluSc SINE Alu -3 306 1 237 211 141 0 chr2 14017827 14017898 -239238685 + L1P1 LINE L1 5617 5697 -458 310 293 47 13 chr2 14018013 14018241 -239238342 + L1MC4a LINE L1 5712 5950 -171 22 0 0 0 chr2 14019022 14019044 -239237539 + AT_rich Low_complexity Low_complexity 1 22 0 221 301 14 0 chr2 14019180 14019253 -239237330 + MIR SINE MIR 189 262 0 6047 78 1 2 chr2 14019753 14020546 -239236037 + L1P LINE L1 3 794 -5352 43267 41 4 3 chr2 14020707 14026848 -239229735 + L1PA4 LINE L1 8 6152 -3 24 53 0 0 chr2 14027793 14027831 -239228752 + AT_rich Low_complexity Low_complexity 1 38 0 205 293 20 61 chr2 14028192 14028291 -239228292 - MIR3 SINE MIR -21 187 93 487 229 62 22 chr2 14028442 14028621 -239227962 - L1MD3 LINE L1 -1 7994 7809 1065 211 21 0 chr2 14028623 14028865 -239227718 + L1MB5 LINE L1 5928 6174 0 262 355 70 40 chr2 14028887 14029259 -239227324 - L2 LINE L2 -688 2626 2244 1831 167 128 13 chr2 14029551 14029935 -239226648 + MSTA LTR MaLR 1 428 0 233 261 63 54 chr2 14030406 14030517 -239226066 + L1ME LINE L1 4532 4643 -1503 373 296 101 77 chr2 14030734 14031027 -239225556 + L1ME LINE L1 4782 5094 -1052 2224 105 0 16 chr2 14031027 14031342 -239225241 - AluSq SINE Alu -3 310 1 373 296 101 77 chr2 14031342 14031554 -239225029 + L1ME LINE L1 5094 5299 -847 262 289 63 19 chr2 14031614 14031773 -239224810 + L1ME LINE L1 5621 5786 -335 24 53 0 0 chr2 14031790 14031828 -239224755 + AT_rich Low_complexity Low_complexity 1 38 0 266 356 0 0 chr2 14031947 14032093 -239224490 + (TA)n Simple_repeat Simple_repeat 1 146 0 368 296 106 53 chr2 14032509 14032716 -239223867 + L1M4 LINE L1 3635 3860 -2286 2351 83 0 0 chr2 14032716 14033018 -239223565 + AluY SINE Alu 1 302 -9 368 296 106 53 chr2 14033018 14033074 -239223509 + L1M4 LINE L1 3860 3912 -2234 343 311 22 11 chr2 14033655 14033835 -239222748 + L1MEd LINE L1 903 1084 -5035 26 0 0 0 chr2 14034126 14034152 -239222431 + AT_rich Low_complexity Low_complexity 1 26 0 272 315 28 6 chr2 14035459 14035640 -239220943 + L1M4 LINE L1 3759 3943 -2203 393 333 51 46 chr2 14036605 14036842 -239219741 + L3 LINE CR1 609 846 -731 2625 33 0 0 chr2 14037314 14037617 -239218966 - AluY SINE Alu -8 303 1 1162 37 0 0 chr2 14037618 14037752 -239218831 - AluY SINE Alu -177 134 1 22 0 0 0 chr2 14038830 14038852 -239217731 + AT_rich Low_complexity Low_complexity 1 22 0 294 357 29 19 chr2 14038865 14039075 -239217508 + MIR SINE MIR 35 246 -16 22 0 0 0 chr2 14039298 14039320 -239217263 + AT_rich Low_complexity Low_complexity 1 22 0 349 165 23 65 chr2 14039759 14039888 -239216695 - MER2 DNA MER2_type -136 209 22 1077 277 39 10 chr2 14040018 14040325 -239216258 + LTR53 LTR ERVL 194 509 -10 196 268 85 49 chr2 14041235 14041317 -239215266 - L2 LINE L2 -2 3311 3227 243 0 0 0 chr2 14042668 14042695 -239213888 + (TTCC)n Simple_repeat Simple_repeat 3 29 0 2169 130 0 0 chr2 14043249 14043556 -239213027 - AluSc SINE Alu -2 307 1 452 283 22 60 chr2 14044241 14044425 -239212158 + MER8 DNA MER2_type 1 177 -62 383 162 14 27 chr2 14044458 14044532 -239212051 - Tigger2 DNA MER2_type -2645 73 1 319 136 2 2 chr2 14044570 14044621 -239211962 + Alu SINE Alu 2 46 -255 1484 205 10 13 chr2 14044831 14045133 -239211450 - AluJb SINE Alu -11 301 1 186 366 14 0 chr2 14045406 14045477 -239211106 + MIR SINE MIR 64 135 -127 206 301 221 28 chr2 14046185 14046398 -239210185 - MIR SINE MIR -6 256 3 261 305 53 33 chr2 14046461 14046612 -239209971 + MIR SINE MIR 109 262 0 207 300 90 10 chr2 14047986 14048086 -239208497 + MIR SINE MIR 91 198 -64 26 30 0 0 chr2 14048086 14048119 -239208464 + AT_rich Low_complexity Low_complexity 1 33 0 414 131 51 51 chr2 14048234 14048554 -239208029 + (TTAAA)n Simple_repeat Simple_repeat 1 320 0 347 187 66 18 chr2 14048485 14048651 -239207932 + (TTTAA)n Simple_repeat Simple_repeat 1 174 0 * 1493 220 26 12 chr2 14048715 14049056 -239207527 + MLT1A1 LTR MaLR 4 349 -16 1528 141 146 68 chr2 14049056 14049453 -239207130 - MSTA LTR MaLR 0 428 1 2001 167 55 40 chr2 14049546 14049966 -239206617 - MSTB LTR MaLR 0 426 1 216 359 34 8 chr2 14052604 14052721 -239203862 + MIR3 SINE MIR 5 124 -84 234 317 85 55 chr2 14053179 14053343 -239203240 + MIR SINE MIR 87 255 -7 30 0 0 0 chr2 14053478 14053508 -239203075 + AT_rich Low_complexity Low_complexity 1 30 0 780 195 0 16 chr2 14053744 14053929 -239202654 + L1MA7 LINE L1 6109 6290 -1 1319 213 111 39 chr2 14054462 14054823 -239201760 + MLT1B LTR MaLR 4 390 0 2269 114 42 28 chr2 14054879 14055238 -239201345 - THE1B LTR MaLR 0 364 1 650 219 11 3 chr2 14055975 14056318 -239200265 + GA-rich Low_complexity Low_complexity 1 346 0 309 232 28 46 chr2 14056436 14056544 -239200039 - MLT1H1 LTR MaLR -2 540 448 268 277 10 29 chr2 14056726 14056829 -239199754 - MLT1I LTR MaLR -260 175 70 2078 181 7 20 chr2 14057207 14057611 -239198972 + Tigger1 DNA MER2_type 1 399 -2019 21 0 0 0 chr2 14058716 14058737 -239197846 + AT_rich Low_complexity Low_complexity 1 21 0 214 279 68 104 chr2 14059238 14059277 -239197306 - MIR SINE MIR -51 157 118 6405 25 1 0 chr2 14059277 14060029 -239196554 + L1PA3 LINE L1 5401 6153 -2 214 279 68 104 chr2 14060029 14060168 -239196415 - MIR SINE MIR -90 118 16 256 224 24 71 chr2 14060439 14060499 -239196084 - MIR SINE MIR -3 259 203 1258 232 54 77 chr2 14060499 14061016 -239195567 + MLT1D LTR MaLR 1 505 0 256 224 24 71 chr2 14061016 14061040 -239195543 - MIR SINE MIR -59 203 179 221 274 0 16 chr2 14061040 14061102 -239195481 - MIR SINE MIR -198 64 4 261 328 50 8 chr2 14061792 14061911 -239194672 + L1ME4a LINE L1 5483 5606 -515 307 264 129 31 chr2 14062497 14062660 -239193923 + L1ME4a LINE L1 5927 6105 -16 2255 131 37 0 chr2 14064233 14064584 -239191999 + THE1B LTR MaLR 1 364 0 196 333 36 36 chr2 14064620 14064758 -239191825 + MIR SINE MIR 20 157 -105 2424 153 11 52 chr2 14064964 14065422 -239191161 - Tigger2 DNA MER2_type 0 2718 2280 388 203 0 0 chr2 14065420 14065489 -239191094 - Tigger2 DNA MER2_type -2649 69 1 * 471 251 82 55 chr2 14065536 14065791 -239190792 - L1MC4 LINE L1 -32 8010 7749 24 32 0 0 chr2 14065850 14065881 -239190702 + AT_rich Low_complexity Low_complexity 1 31 0 336 326 88 18 chr2 14065891 14066118 -239190465 - L1MC4 LINE L1 -462 7580 7338 762 97 0 18 chr2 14066120 14066234 -239190349 + FRAM SINE Alu 60 171 -5 338 278 166 22 chr2 14067128 14067351 -239189232 + L2 LINE L2 2108 2362 -952 297 377 45 0 chr2 14070981 14071135 -239185448 - MIR3 SINE MIR -3 205 45 242 328 98 25 chr2 14071437 14071559 -239185024 + MIR SINE MIR 17 147 -61 209 306 157 0 chr2 14071579 14071700 -239184883 - MIR SINE MIR 0 262 123 760 293 45 4 chr2 14071723 14071969 -239184614 + MIR SINE MIR 2 257 -5 778 257 71 7 chr2 14072303 14072583 -239184000 + L1MC4 LINE L1 7381 7678 -364 1826 155 0 20 chr2 14072838 14073134 -239183449 + AluSx SINE Alu 1 290 -22 1791 231 20 39 chr2 14073248 14073759 -239182824 - MLT1D LTR MaLR -4 501 1 226 327 36 45 chr2 14073970 14074020 -239182563 + L2 LINE L2 3157 3206 -66 1534 238 79 25 chr2 14074020 14074499 -239182084 + MLT1D LTR MaLR 1 505 0 226 327 36 45 chr2 14074499 14074558 -239182025 + L2 LINE L2 3206 3265 -7 256 250 0 0 chr2 14074560 14074612 -239181971 + GA-rich Low_complexity Low_complexity 4 55 0 1109 165 6 0 chr2 14076271 14076453 -239180130 + Tigger1 DNA MER2_type 2236 2418 0 2193 61 27 24 chr2 14077268 14077565 -239179018 + AluY SINE Alu 1 298 -13 256 272 12 12 chr2 14078643 14078724 -239177859 + (TATATG)n Simple_repeat Simple_repeat 3 83 0 317 266 85 32 chr2 14078804 14078898 -239177685 + L2 LINE L2 3199 3297 -16 1326 254 87 33 chr2 14079067 14079790 -239176793 + L1M4 LINE L1 2402 3163 -2983 950 202 21 0 chr2 14079811 14079999 -239176584 + MLT1C LTR MaLR 276 467 0 314 296 0 0 chr2 14081377 14081475 -239175108 - MLT1-int LTR MaLR -1268 103 6 23 0 0 0 chr2 14081935 14081958 -239174625 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr2 14082273 14082299 -239174284 + AT_rich Low_complexity Low_complexity 1 26 0 297 0 0 0 chr2 14082355 14082388 -239174195 + (CA)n Simple_repeat Simple_repeat 2 34 0 2505 254 63 6 chr2 14082495 14083132 -239173451 + ERVL LTR ERVL 52 724 -5040 272 284 12 0 chr2 14083141 14083222 -239173361 - MLT1E LTR MaLR -452 141 60 6174 203 20 19 chr2 14083222 14084623 -239171960 - L1P LINE L1 -1679 4467 3065 777 215 50 20 chr2 14084659 14084859 -239171724 - MER3 DNA MER1_type 0 209 4 254 202 281 0 chr2 14085575 14085664 -239170919 + MIR SINE MIR 3 116 -146 2371 78 3 10 chr2 14085677 14085986 -239170597 + AluY SINE Alu 1 307 -4 237 254 0 0 chr2 14086106 14086165 -239170418 + (TTA)n Simple_repeat Simple_repeat 2 60 0 665 320 71 43 chr2 14086593 14086987 -239169596 + MLT1J LTR MaLR 1 405 -106 25 31 0 0 chr2 14087456 14087488 -239169095 + AT_rich Low_complexity Low_complexity 1 32 0 201 290 29 0 chr2 14087562 14087631 -239168952 + (TG)n Simple_repeat Simple_repeat 2 72 0 1129 224 76 7 chr2 14087652 14087955 -239168628 - MER2 DNA MER2_type -1 344 21 350 239 74 103 chr2 14088020 14088263 -239168320 - MER106B DNA MER1_type 0 1059 1 21 36 0 0 chr2 14088781 14088809 -239167774 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 14089180 14089208 -239167375 + AT_rich Low_complexity Low_complexity 1 28 0 291 343 17 35 chr2 14089341 14089513 -239167070 - MIR SINE MIR -74 188 20 284 347 62 34 chr2 14089667 14089843 -239166740 - MIR3 SINE MIR -9 199 19 1463 35 0 0 chr2 14090000 14090174 -239166409 + L1PA3 LINE L1 5978 6151 -4 1595 148 9 99 chr2 14090723 14091067 -239165516 + AluSp SINE Alu 1 313 0 23 68 0 0 chr2 14091068 14091112 -239165471 + AT_rich Low_complexity Low_complexity 1 44 0 1811 144 14 0 chr2 14091662 14091939 -239164644 - AluSp SINE Alu -30 283 3 985 194 0 30 chr2 14091949 14092150 -239164433 + MER3 DNA MER1_type 14 208 -1 365 318 5 78 chr2 14092461 14092653 -239163930 - MIR3 SINE MIR -1 207 30 204 67 0 0 chr2 14093871 14093901 -239162682 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 259 183 0 50 chr2 14094885 14094945 -239161638 - MLT2D LTR ERVL -2 518 462 335 169 14 0 chr2 14094968 14095039 -239161544 + GA-rich Low_complexity Low_complexity 1 72 0 1495 225 25 3 chr2 14095043 14095358 -239161225 - MLT2D LTR ERVL -89 325 4 323 350 62 46 chr2 14096000 14096240 -239160343 - L2 LINE L2 -830 2484 2241 520 293 27 0 chr2 14096745 14096892 -239159691 - MIR SINE MIR -46 216 66 21 36 0 0 chr2 14097177 14097205 -239159378 + AT_rich Low_complexity Low_complexity 1 28 0 9684 52 2 2 chr2 14098334 14099576 -239157007 - L1P LINE L1 -1079 5067 3825 7192 50 3 2 chr2 14099576 14100564 -239156019 + L1PA5 LINE L1 5166 6154 0 31 0 0 0 chr2 14100599 14100630 -239155953 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr2 14100639 14100663 -239155920 + AT_rich Low_complexity Low_complexity 1 24 0 1036 228 65 45 chr2 14100792 14101148 -239155435 - MLT1A1 LTR MaLR 0 365 3 216 360 171 17 chr2 14101241 14101416 -239155167 - L3 LINE CR1 -69 1508 1307 21 0 0 0 chr2 14101535 14101556 -239155027 + AT_rich Low_complexity Low_complexity 1 21 0 1224 276 123 31 chr2 14102016 14102650 -239153933 + L1M4 LINE L1 1106 1797 -4587 2121 135 36 14 chr2 14102754 14103110 -239153473 - THE1B LTR MaLR 0 364 1 3606 124 83 26 chr2 14103572 14104232 -239152351 - L1PA16 LINE L1 0 6166 5469 385 286 20 27 chr2 14106465 14106612 -239149971 - MIR SINE MIR -25 237 92 259 311 82 37 chr2 14106987 14107122 -239149461 + MIR SINE MIR 53 193 -69 457 355 70 4 chr2 14108251 14108493 -239148090 + MIR SINE MIR 2 259 -3 242 274 78 17 chr2 14108721 14108900 -239147683 - L1M4 LINE L1 -3568 2578 2389 541 277 10 20 chr2 14108933 14109135 -239147448 + L1M4 LINE L1 2961 3160 -3222 * 1003 279 132 25 chr2 14109129 14109711 -239146872 + L1M4 LINE L1 4549 5190 -1192 185 386 10 10 chr2 14110208 14110309 -239146274 + MIR SINE MIR 75 175 -87 581 294 111 67 chr2 14113069 14113413 -239143170 - L2 LINE L2 -3 3310 2952 345 144 39 39 chr2 14114145 14114298 -239142285 + (TA)n Simple_repeat Simple_repeat 1 153 0 339 280 84 71 chr2 14114579 14115171 -239141412 + L1M4 LINE L1 4456 5055 -1091 6644 54 0 53 chr2 14115232 14116250 -239140333 + L1PA6 LINE L1 5214 6181 0 438 319 92 8 chr2 14116305 14116662 -239139921 - L1ME4a LINE L1 -153 5968 5582 381 322 64 25 chr2 14118168 14118404 -239138179 - L1ME LINE L1 -303 5818 5574 243 0 0 0 chr2 14119482 14119509 -239137074 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1332 94 89 52 chr2 14119952 14120165 -239136418 - AluSq SINE Alu -18 295 75 381 216 162 48 chr2 14120231 14120398 -239136185 - L2 LINE L2 0 3313 3128 453 257 65 14 chr2 14120610 14120762 -239135821 + MIR SINE MIR 30 187 -66 437 309 28 46 chr2 14121151 14121368 -239135215 - MIR SINE MIR -3 259 47 535 242 11 54 chr2 14121616 14121802 -239134781 + MER96B DNA MER1_type? 1 178 -239 233 193 193 0 chr2 14121858 14121915 -239134668 - MER58A DNA MER1_type -31 76 9 3601 194 167 62 chr2 14122581 14123792 -239132791 + MER52A LTR ERV1 240 1512 -65 288 138 17 35 chr2 14123787 14123845 -239132738 + MER52C LTR ERV1 1222 1278 0 * 352 192 19 0 chr2 14123997 14124101 -239132482 + (TAGA)n Simple_repeat Simple_repeat 1 106 0 250 279 59 73 chr2 14125875 14126079 -239130504 + LTR67 LTR ERVL 357 557 0 314 234 52 0 chr2 14126575 14126652 -239129931 - MER94 DNA DNA -53 81 1 351 0 0 0 chr2 14126920 14126959 -239129624 + (CA)n Simple_repeat Simple_repeat 2 40 0 22 0 0 0 chr2 14127655 14127677 -239128906 + AT_rich Low_complexity Low_complexity 1 22 0 332 309 24 16 chr2 14128835 14128961 -239127622 - MIR SINE MIR -27 235 109 429 294 120 40 chr2 14128962 14129237 -239127346 + L2 LINE L2 3017 3313 0 401 345 48 62 chr2 14129983 14130273 -239126310 + L2 LINE L2 2987 3272 0 2210 105 3 19 chr2 14131521 14131836 -239124747 - AluSp SINE Alu -3 310 1 218 307 71 39 chr2 14132204 14132331 -239124252 - L2 LINE L2 -1 3312 3182 22 0 0 0 chr2 14132572 14132594 -239123989 + AT_rich Low_complexity Low_complexity 1 22 0 247 273 235 16 chr2 14132830 14133013 -239123570 + LTR16C LTR ERVL 236 458 -33 996 315 36 8 chr2 14133388 14133753 -239122830 - LTR16A LTR ERVL 0 450 76 279 284 43 26 chr2 14134275 14134391 -239122192 + L2 LINE L2 2945 3062 -251 246 277 188 9 chr2 14134628 14134740 -239121843 + L2 LINE L2 3134 3265 -7 621 290 98 58 chr2 14136203 14136531 -239120052 - LTR67 LTR ERVL -10 547 207 220 109 18 36 chr2 14136765 14136820 -239119763 + (TCTCC)n Simple_repeat Simple_repeat 3 56 0 22 35 0 0 chr2 14137938 14137967 -239118616 + AT_rich Low_complexity Low_complexity 1 29 0 23 68 0 0 chr2 14138495 14138539 -239118044 + AT_rich Low_complexity Low_complexity 1 44 0 1805 253 89 81 chr2 14138641 14138865 -239117718 + L1MC4 LINE L1 5706 5927 -1754 1137 265 95 55 chr2 14138865 14139432 -239117151 - MLT1E LTR MaLR 0 593 4 1805 253 89 81 chr2 14139432 14139486 -239117097 + L1MC4 LINE L1 5927 5979 -1702 336 64 0 0 chr2 14139486 14139533 -239117050 + (CA)n Simple_repeat Simple_repeat 1 47 0 1805 253 89 81 chr2 14139533 14140176 -239116407 + L1MC4 LINE L1 5979 6615 -1066 2321 93 0 0 chr2 14140176 14140486 -239116097 - AluY SINE Alu -1 310 1 1805 253 89 81 chr2 14140486 14141756 -239114827 + L1MC4 LINE L1 6615 7681 0 483 87 0 0 chr2 14142769 14142838 -239113745 + (GGAA)n Simple_repeat Simple_repeat 4 72 0 234 213 120 0 chr2 14142841 14142916 -239113667 + L1MC4a LINE L1 7724 7807 -1 237 234 0 0 chr2 14143072 14143119 -239113464 + GA-rich Low_complexity Low_complexity 1 47 0 311 266 108 38 chr2 14143337 14143495 -239113088 + HAL1 LINE L1 1501 1669 -838 1505 199 107 135 chr2 14144085 14145055 -239111528 + LTR1B LTR ERV1 1 1020 0 230 294 65 22 chr2 14145086 14145178 -239111405 + L2 LINE L2 3137 3232 -40 2041 50 7 5 chr2 14145531 14145818 -239110765 - L1PA3 LINE L1 -248 5907 5660 2090 65 4 0 chr2 14145820 14146096 -239110487 + L1PA3 LINE L1 5879 6155 0 401 293 68 14 chr2 14146506 14146653 -239109930 - MIR SINE MIR -13 249 95 193 351 95 7 chr2 14148120 14148268 -239108315 + MIR SINE MIR 30 190 -72 2665 3 3 0 chr2 14149681 14149970 -239106613 + AluYa5 SINE Alu 1 290 -21 1175 111 5 50 chr2 14150073 14150271 -239106312 - L1PA12 LINE L1 -292 5876 5688 5160 203 14 8 chr2 14150281 14151681 -239104902 - L1PA12 LINE L1 -564 5601 4193 1180 147 0 0 chr2 14151685 14151862 -239104721 + THE1B LTR MaLR 1 177 -187 308 343 105 37 chr2 14151890 14152243 -239104340 - L1MC/D LINE L1 -444 5798 5422 286 238 131 79 chr2 14152671 14152885 -239103698 - L3 LINE CR1 -175 1402 1178 535 323 53 8 chr2 14154382 14154645 -239101938 - LTR16A1 LTR ERVL -11 446 172 234 331 49 25 chr2 14154808 14154971 -239101612 - MIR3 SINE MIR -5 203 37 2652 178 4 13 chr2 14155391 14155852 -239100731 - LTR32 LTR ERVL 0 471 15 215 379 35 17 chr2 14156415 14156531 -239100052 + L3 LINE CR1 1230 1347 -230 2023 145 85 18 chr2 14156557 14156958 -239099625 + MSTA LTR MaLR 1 428 0 21 0 0 0 chr2 14158360 14158381 -239098202 + AT_rich Low_complexity Low_complexity 1 21 0 1415 273 18 32 chr2 14158715 14159499 -239097084 + L1ME2 LINE L1 2999 3746 -2400 1298 221 158 9 chr2 14159532 14159854 -239096729 + MSTB LTR MaLR 1 370 -56 1111 60 7 0 chr2 14159869 14160018 -239096565 - L1PA4 LINE L1 -3 6152 6003 462 73 59 0 chr2 14160047 14160115 -239096468 + MSTB LTR MaLR 357 428 0 949 212 174 22 chr2 14160116 14160438 -239096145 + L1ME2 LINE L1 3785 4171 -1975 267 31 0 0 chr2 14160438 14160470 -239096113 + (TAA)n Simple_repeat Simple_repeat 2 33 0 949 212 174 22 chr2 14160470 14160515 -239096068 + L1ME2 LINE L1 4171 4208 -1938 1482 241 104 32 chr2 14160519 14161049 -239095534 + L1ME2 LINE L1 5586 6153 -11 2218 79 13 13 chr2 14161348 14161653 -239094930 + AluY SINE Alu 1 305 -6 288 384 30 45 chr2 14162066 14162264 -239094319 - MIR3 SINE MIR -6 202 8 333 0 0 0 chr2 14162319 14162356 -239094227 + (CA)n Simple_repeat Simple_repeat 1 37 0 21 0 0 0 chr2 14162856 14162877 -239093706 + AT_rich Low_complexity Low_complexity 1 21 0 208 0 0 59 chr2 14163271 14163305 -239093278 + (TAAAA)n Simple_repeat Simple_repeat 4 35 0 3306 214 29 42 chr2 14165383 14166205 -239090378 + MER52A LTR ERV1 232 1736 -19 508 238 86 13 chr2 14166220 14166371 -239090212 - MLT1H LTR MaLR -375 174 13 210 293 24 0 chr2 14167181 14167263 -239089320 + (TTCA)n Simple_repeat Simple_repeat 4 87 0 25 0 0 0 chr2 14167530 14167555 -239089028 + AT_rich Low_complexity Low_complexity 1 25 0 6890 97 10 5 chr2 14167835 14169644 -239086939 + L1PA7 LINE L1 4350 6152 -2 480 202 190 11 chr2 14169804 14170048 -239086535 - L1ME2 LINE L1 -203 6030 5712 306 167 32 8 chr2 14170048 14170140 -239086443 - L1P2 LINE L1 -675 5479 5382 1970 252 67 46 chr2 14170156 14170919 -239085664 - L1ME2 LINE L1 -721 5514 4727 735 239 12 12 chr2 14170919 14171086 -239085497 + FAM SINE Alu 2 168 -7 1970 252 67 46 chr2 14171086 14171514 -239085069 - L1ME2 LINE L1 -1508 4727 4310 1234 117 9 72 chr2 14171517 14171740 -239084843 - AluSq SINE Alu 0 313 105 2307 252 65 72 chr2 14171742 14171950 -239084633 - L1ME2 LINE L1 -1932 4283 4075 2250 111 0 0 chr2 14171950 14172257 -239084326 - AluSx SINE Alu -5 307 1 2307 252 65 72 chr2 14172257 14172849 -239083734 - L1ME2 LINE L1 -2140 4075 3480 1881 161 3 0 chr2 14172849 14173147 -239083436 - AluJo SINE Alu -11 301 3 2307 252 65 72 chr2 14173147 14173426 -239083157 - L1ME2 LINE L1 -2735 3480 3201 387 41 0 0 chr2 14173426 14173475 -239083108 + (CA)n Simple_repeat Simple_repeat 2 50 0 1997 176 42 33 chr2 14173485 14173911 -239082672 + Tigger2a DNA MER2_type 2 431 -3 441 0 0 0 chr2 14173914 14173963 -239082620 + (TG)n Simple_repeat Simple_repeat 2 50 0 2307 252 65 72 chr2 14173963 14174342 -239082241 - L1ME2 LINE L1 -3025 3190 2818 975 288 48 6 chr2 14174348 14174969 -239081614 - L1ME2 LINE L1 -3622 2593 1989 944 273 107 38 chr2 14175013 14175833 -239080750 - L1ME2 LINE L1 -4485 1911 1035 2051 193 82 66 chr2 14175846 14176635 -239079948 - MER52A LTR ERV1 -810 945 1 2255 109 0 7 chr2 14176969 14177272 -239079311 - AluSg SINE Alu -9 301 1 245 319 0 28 chr2 14178856 14178928 -239077655 + MIR SINE MIR 51 120 -142 21 36 0 0 chr2 14179047 14179075 -239077508 + AT_rich Low_complexity Low_complexity 1 28 0 522 266 110 12 chr2 14179425 14179598 -239076985 - L2 LINE L2 0 3313 3124 4591 200 23 7 chr2 14179988 14181012 -239075571 + L1 LINE L1 3278 4318 -1828 1966 165 67 20 chr2 14183435 14183840 -239072743 - MSTA LTR MaLR 0 428 5 774 302 36 4 chr2 14183869 14184121 -239072462 + MIR SINE MIR 1 260 -2 643 206 65 13 chr2 14185223 14185378 -239071205 - MIR SINE MIR -37 225 63 248 131 81 19 chr2 14186469 14186629 -239069954 + (TA)n Simple_repeat Simple_repeat 2 171 0 181 191 52 7 chr2 14186640 14186776 -239069807 + (TA)n Simple_repeat Simple_repeat 2 143 0 217 350 106 34 chr2 14186957 14187194 -239069389 - L2 LINE L2 -204 3068 2815 1156 235 26 53 chr2 14187958 14188413 -239068170 - L1MDa LINE L1 -2105 4435 3993 571 233 101 13 chr2 14188446 14188605 -239067978 - FRAM SINE Alu 0 40 1 398 276 114 20 chr2 14188750 14188996 -239067587 - L1MDa LINE L1 -4009 2531 2263 257 258 104 112 chr2 14190004 14190193 -239066390 + LTR41 LTR ERVL 510 698 -75 1550 103 9 5 chr2 14190193 14190407 -239066176 - AluSc SINE Alu -12 297 83 257 258 104 112 chr2 14190407 14190477 -239066106 + LTR41 LTR ERVL 698 767 -6 3082 94 61 2 chr2 14190873 14191332 -239065251 - LTR19A LTR ERV1 0 486 1 1632 143 4 16 chr2 14191887 14192138 -239064445 + AluSx SINE Alu 50 297 -15 284 296 42 22 chr2 14192603 14192708 -239063875 + MIR SINE MIR 39 143 -76 348 24 0 0 chr2 14193421 14193462 -239063121 + (CA)n Simple_repeat Simple_repeat 1 41 0 496 290 105 0 chr2 14193568 14193778 -239062805 + MIR SINE MIR 17 252 -10 539 114 0 11 chr2 14195374 14195462 -239061121 + Tigger2 DNA MER2_type 2399 2485 -233 235 194 81 0 chr2 14195463 14195525 -239061058 - L1MA4 LINE L1 -5 6295 6229 518 200 30 0 chr2 14195525 14195625 -239060958 - U6 snRNA snRNA 0 107 5 738 158 70 6 chr2 14195629 14195800 -239060783 + Tigger2 DNA MER2_type 2473 2654 -64 971 150 0 0 chr2 14195805 14195958 -239060625 - L1PA13 LINE L1 -20 6143 5991 234 191 0 24 chr2 14195965 14196007 -239060576 + Tigger2 DNA MER2_type 2667 2707 -11 1468 246 30 15 chr2 14196676 14196955 -239059628 + MER63B DNA MER1_type 1 289 -773 2201 115 7 0 chr2 14196955 14197259 -239059324 - AluSq SINE Alu -7 306 1 1468 246 30 15 chr2 14197259 14197386 -239059197 + MER63B DNA MER1_type 289 413 -23 4861 148 19 6 chr2 14197953 14199809 -239056774 - L1PA15 LINE L1 -7 6158 4261 2938 208 10 10 chr2 14199137 14199814 -239056769 - L1 LINE L1 -1214 4932 4256 381 338 22 22 chr2 14199830 14199966 -239056617 - MIR3 SINE MIR -15 193 58 2024 128 0 10 chr2 14200065 14200363 -239056220 - AluSc SINE Alu -14 295 1 350 317 14 41 chr2 14201635 14201780 -239054803 + L2 LINE L2 3173 3313 0 341 93 35 35 chr2 14201785 14201871 -239054712 + (TATATG)n Simple_repeat Simple_repeat 2 87 0 2158 128 3 10 chr2 14203035 14203347 -239053236 - AluSx SINE Alu -2 310 1 297 284 35 52 chr2 14203485 14203601 -239052982 + L2 LINE L2 3158 3271 -1 2127 143 0 0 chr2 14203950 14204258 -239052325 + AluSx SINE Alu 1 308 -4 258 321 22 44 chr2 14205681 14205818 -239050765 - L2 LINE L2 -213 3059 2926 282 318 88 7 chr2 14206357 14206505 -239050078 - MIR SINE MIR -68 194 35 1983 123 0 14 chr2 14207148 14207477 -239049106 + AluSx SINE Alu 1 325 0 224 246 94 70 chr2 14207505 14207676 -239048907 - MIR SINE MIR 0 262 88 244 314 0 0 chr2 14207756 14207826 -239048757 + MIR SINE MIR 85 154 -108 383 201 2 116 chr2 14208524 14208569 -239048014 + MSTC LTR MaLR 5 54 -342 2094 108 3 29 chr2 14208569 14208875 -239047708 + AluSq SINE Alu 1 298 -15 383 201 2 116 chr2 14208875 14208942 -239047641 + MSTC LTR MaLR 54 110 -286 200 355 78 27 chr2 14209977 14210233 -239046350 + L2 LINE L2 2951 3219 -94 182 272 74 62 chr2 14210252 14210333 -239046250 - MIR3 SINE MIR -17 191 110 259 377 44 6 chr2 14210613 14210772 -239045811 - MIR SINE MIR -12 250 86 248 300 75 17 chr2 14211485 14211605 -239044978 + MIR SINE MIR 81 207 -55 478 196 98 12 chr2 14211605 14211768 -239044815 - Charlie5 DNA MER1_type -27 2585 2409 186 43 0 0 chr2 14212207 14212230 -239044353 + (T)n Simple_repeat Simple_repeat 1 23 0 22 35 0 0 chr2 14212840 14212869 -239043714 + AT_rich Low_complexity Low_complexity 1 29 0 331 276 12 0 chr2 14212896 14213066 -239043517 + (TA)n Simple_repeat Simple_repeat 2 173 0 189 259 99 61 chr2 14213200 14213331 -239043252 + L2 LINE L2 2948 3083 -189 557 216 37 6 chr2 14213376 14213538 -239043045 - HsTC2 DNA Tc2 0 1900 1734 278 319 114 30 chr2 14213542 14213708 -239042875 - HsTC2 DNA Tc2 -1718 180 1 199 273 0 65 chr2 14213923 14214000 -239042583 + L2 LINE L2 3242 3313 0 711 164 40 109 chr2 14214843 14215044 -239041539 + MER5A DNA MER1_type 3 189 0 399 210 11 177 chr2 14215842 14216023 -239040560 + MER63 DNA MER1_type 7 783 -279 425 221 49 0 chr2 14216320 14216442 -239040141 + L1 LINE L1 4109 4236 -1910 204 109 36 18 chr2 14216514 14216569 -239040014 + (TA)n Simple_repeat Simple_repeat 1 56 0 3161 203 27 19 chr2 14216579 14217328 -239039255 + L1 LINE L1 4211 4965 -1181 658 212 0 0 chr2 14217329 14217447 -239039136 + Tigger7 DNA MER2_type 1 118 -615 466 261 119 54 chr2 14217731 14218210 -239038373 + MER34B LTR ERV1 6 565 0 306 211 11 84 chr2 14218211 14218306 -239038277 - MIR SINE MIR -101 161 74 6408 122 26 5 chr2 14218377 14219438 -239037145 + L1PBa LINE L1 1392 2475 -4388 363 44 0 0 chr2 14220143 14220188 -239036395 + (CA)n Simple_repeat Simple_repeat 2 46 0 361 350 145 14 chr2 14220416 14220767 -239035816 - L2 LINE L2 -1882 1432 1036 2807 246 48 14 chr2 14220927 14221899 -239034684 + L1MDa LINE L1 2546 3547 -2993 7089 45 7 6 chr2 14223508 14225157 -239031426 + L1PA4 LINE L1 4504 6155 0 1675 176 54 8 chr2 14225157 14225519 -239031064 + L1PB4 LINE L1 5769 6155 -1 610 338 107 13 chr2 14225523 14225908 -239030675 - ERVL LTR ERVL -948 4816 4396 22 0 0 0 chr2 14226113 14226135 -239030448 + AT_rich Low_complexity Low_complexity 1 22 0 307 312 175 7 chr2 14226335 14226489 -239030094 - LTR16C LTR ERVL -127 364 185 991 162 30 5 chr2 14226559 14226757 -239029826 - MER57B LTR ERV1 0 434 232 411 171 0 0 chr2 14228406 14228511 -239028072 + G-rich Low_complexity Low_complexity 1 105 0 280 304 33 0 chr2 14229438 14229530 -239027053 + MIR SINE MIR 109 203 -59 27 29 0 0 chr2 14229675 14229709 -239026874 + AT_rich Low_complexity Low_complexity 1 34 0 1742 237 86 0 chr2 14230605 14231061 -239025522 - MLT1D LTR MaLR -8 497 3 227 269 62 48 chr2 14231459 14231604 -239024979 + L2 LINE L2 2966 3112 -160 1582 209 94 30 chr2 14232125 14232593 -239023990 - Charlie1b DNA MER1_type -24 499 2 218 260 41 55 chr2 14233551 14233624 -239022959 - L2 LINE L2 -224 3048 2977 21 36 0 0 chr2 14234253 14234281 -239022302 + AT_rich Low_complexity Low_complexity 1 28 0 1360 124 0 0 chr2 14234281 14234491 -239022092 - L1MA1 LINE L1 0 6302 6093 638 217 121 24 chr2 14234756 14234922 -239021661 - MER101B LTR ERV1 -386 184 3 1612 200 113 45 chr2 14235750 14236357 -239020226 + LTR48B LTR ERV1 1 707 0 4111 196 66 39 chr2 14236377 14236571 -239020012 + L1MC3 LINE L1 6655 6842 -943 276 30 0 0 chr2 14236571 14236604 -239019979 + (GA)n Simple_repeat Simple_repeat 1 33 0 4111 196 66 39 chr2 14236604 14237007 -239019576 + L1MC3 LINE L1 6842 7232 -553 1206 209 90 11 chr2 14237007 14237284 -239019299 + AluJo SINE Alu 1 299 -3 4111 196 66 39 chr2 14237284 14237698 -239018885 + L1MC3 LINE L1 7232 7695 -90 373 215 0 0 chr2 14238807 14238872 -239017711 - AluJb SINE Alu -3 299 235 881 157 0 20 chr2 14238872 14239019 -239017564 - AluJb SINE Alu -168 144 1 1060 174 10 0 chr2 14239093 14239289 -239017294 + L1PBa LINE L1 3 200 -6663 755 144 0 0 chr2 14239291 14239409 -239017174 + L1PBa LINE L1 636 753 -6110 * 2537 100 22 0 chr2 14239398 14239768 -239016815 + L1PBa LINE L1 2309 2686 -4177 1091 217 13 0 chr2 14239871 14240101 -239016482 + L1MC1 LINE L1 6101 6333 0 230 284 60 0 chr2 14240878 14240945 -239015638 - L2 LINE L2 -35 3237 3167 1761 170 71 152 chr2 14241048 14241838 -239014745 + LTR8A LTR ERV1 2 727 0 21 0 0 0 chr2 14242327 14242348 -239014235 + AT_rich Low_complexity Low_complexity 1 21 0 4628 20 11 0 chr2 14244096 14244643 -239011940 + L1PA4 LINE L1 5601 6153 -2 198 278 22 56 chr2 14245008 14245098 -239011485 - MIR SINE MIR -123 139 53 192 294 106 0 chr2 14246091 14246176 -239010407 + MIR3 SINE MIR 90 183 -25 377 185 0 0 chr2 14247400 14247481 -239009102 - L1MB7 LINE L1 0 6184 6104 * 3054 236 7 15 chr2 14247478 14248204 -239008379 - L1MB8 LINE L1 -27 6151 5432 274 315 20 54 chr2 14248291 14248440 -239008143 + L1MC5 LINE L1 7751 7894 -67 307 304 33 0 chr2 14249379 14249471 -239007112 - MIR SINE MIR -83 125 31 2367 175 45 7 chr2 14249871 14250316 -239006267 + MLT1C LTR MaLR 4 465 -2 2044 141 0 3 chr2 14250632 14250930 -239005653 - AluSx SINE Alu -15 297 1 321 346 154 34 chr2 14251122 14251414 -239005169 - L3 LINE CR1 -852 725 399 209 338 13 13 chr2 14252696 14252773 -239003810 + MIR SINE MIR 47 123 -139 291 104 0 0 chr2 14252792 14252840 -239003743 + (TG)n Simple_repeat Simple_repeat 2 49 0 1508 165 11 15 chr2 14252884 14253156 -239003427 + AluJb SINE Alu 40 310 -2 247 368 75 11 chr2 14253312 14253486 -239003097 - MER5A DNA MER1_type -3 186 2 493 184 19 0 chr2 14255287 14255390 -239001193 + MER58 DNA MER1_type 2310 2414 -6 962 206 12 74 chr2 14255991 14256248 -239000335 - MLT1A1 LTR MaLR -124 241 1 272 100 0 20 chr2 14256386 14256436 -239000147 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 1070 163 0 16 chr2 14256444 14256634 -238999949 - AluYa5 SINE Alu -19 292 106 898 89 51 25 chr2 14256742 14256900 -238999683 + L1PA5 LINE L1 5932 6093 -61 406 267 41 0 chr2 14256917 14257063 -238999520 + (TATATG)n Simple_repeat Simple_repeat 3 154 0 726 54 0 0 chr2 14257066 14257159 -238999424 + L1PA5 LINE L1 6058 6150 -4 225 132 40 53 chr2 14257406 14257482 -238999101 + (TA)n Simple_repeat Simple_repeat 1 75 0 359 224 0 0 chr2 14257521 14257588 -238998995 - ORSL DNA AcHobo -208 67 1 208 395 12 0 chr2 14257595 14257681 -238998902 + L2 LINE L2 2967 3053 -219 321 208 0 0 chr2 14258326 14258403 -238998180 + (TA)n Simple_repeat Simple_repeat 1 77 0 233 100 20 60 chr2 14260211 14260261 -238996322 + MER69 DNA AcHobo 6 53 -2473 477 132 0 33 chr2 14260261 14260337 -238996246 - AluJ/FRAM SINE Alu -1 311 237 1459 114 10 0 chr2 14260337 14260538 -238996045 - AluSq SINE Alu -110 203 1 477 132 0 33 chr2 14260538 14260552 -238996031 - AluJ/FRAM SINE Alu -75 237 224 288 355 91 69 chr2 14260771 14260952 -238995631 + L2 LINE L2 2837 3013 -259 2016 115 20 14 chr2 14260952 14261248 -238995335 + AluSx SINE Alu 1 298 -14 288 355 91 69 chr2 14261248 14261474 -238995109 + L2 LINE L2 3013 3253 -19 382 314 29 58 chr2 14261990 14262127 -238994456 - L2 LINE L2 -7 3265 3133 2405 144 30 37 chr2 14262185 14262616 -238993967 - MSTC LTR MaLR 0 428 1 254 305 150 18 chr2 14262702 14262869 -238993714 - L2 LINE L2 -523 2791 2603 365 329 111 5 chr2 14263664 14263871 -238992712 + MIR SINE MIR 17 245 -17 336 316 34 26 chr2 14265172 14265289 -238991294 + MER5B DNA MER1_type 1 118 -60 387 232 19 13 chr2 14265391 14265546 -238991037 + (TATATG)n Simple_repeat Simple_repeat 3 158 0 2301 136 42 57 chr2 14265558 14266052 -238990531 + L1MA9 LINE L1 5821 6307 -5 189 195 0 0 chr2 14266080 14266121 -238990462 + (TGGA)n Simple_repeat Simple_repeat 4 44 0 1077 190 37 48 chr2 14266122 14266390 -238990193 - L1MD2 LINE L1 -43 6316 6052 262 368 66 33 chr2 14267271 14267374 -238989209 - L2 LINE L2 0 3272 3161 2482 99 71 48 chr2 14267374 14267764 -238988819 + MLT2A1 LTR ERVL 1 403 -41 309 51 0 0 chr2 14267764 14267803 -238988780 + (TG)n Simple_repeat Simple_repeat 2 40 0 2482 99 71 48 chr2 14267803 14267846 -238988737 + MLT2A1 LTR ERVL 403 444 0 262 368 66 33 chr2 14267846 14267894 -238988689 - L2 LINE L2 -111 3161 3116 215 264 24 16 chr2 14268634 14268759 -238987824 + (TTA)n Simple_repeat Simple_repeat 3 128 0 232 271 83 31 chr2 14268849 14268945 -238987638 - MIR SINE MIR -66 142 42 186 143 0 0 chr2 14269278 14269313 -238987270 + (CA)n Simple_repeat Simple_repeat 2 36 0 326 359 51 18 chr2 14269423 14269582 -238987001 + MIR SINE MIR 25 194 -68 2355 69 10 0 chr2 14269582 14269872 -238986711 + AluSc SINE Alu 1 293 -16 326 359 51 18 chr2 14269872 14269929 -238986654 + MIR SINE MIR 194 248 -14 226 122 41 20 chr2 14270360 14270409 -238986174 + GA-rich Low_complexity Low_complexity 1 50 0 22 35 0 0 chr2 14270786 14270815 -238985768 + AT_rich Low_complexity Low_complexity 1 29 0 512 262 125 12 chr2 14270887 14271055 -238985528 - MER5A DNA MER1_type -2 187 1 2218 108 0 3 chr2 14271242 14271539 -238985044 + AluSc SINE Alu 1 296 -13 206 367 0 0 chr2 14272161 14272221 -238984362 + MIR SINE MIR 87 146 -62 24 32 0 0 chr2 14273282 14273313 -238983270 + AT_rich Low_complexity Low_complexity 1 31 0 275 281 34 0 chr2 14273600 14273689 -238982894 + MIR3 SINE MIR 111 202 -6 373 295 58 43 chr2 14274147 14274286 -238982297 - MIR3 SINE MIR -47 161 21 197 359 51 0 chr2 14275750 14275828 -238980755 + MIR3 SINE MIR 79 160 -48 262 360 36 0 chr2 14276032 14276143 -238980440 - L2 LINE L2 0 3272 3158 232 313 32 114 chr2 14276517 14276763 -238979820 - L2 LINE L2 -491 2823 2598 239 256 47 35 chr2 14277559 14277645 -238978938 + L3 LINE CR1 1348 1434 -143 2543 91 3 11 chr2 14277654 14278015 -238978568 - L1PA8 LINE L1 0 6172 5815 226 307 95 44 chr2 14278037 14278174 -238978409 + MIR SINE MIR 50 193 -69 345 304 156 49 chr2 14279655 14280103 -238976480 - L2 LINE L2 -632 2682 2187 2066 153 8 6 chr2 14280229 14280588 -238975995 + L1PA13 LINE L1 5788 6147 -16 25 0 0 0 chr2 14280592 14280617 -238975966 + AT_rich Low_complexity Low_complexity 1 25 0 557 191 71 0 chr2 14280672 14280798 -238975785 - MER45A DNA AcHobo 0 178 44 276 351 77 62 chr2 14280865 14281124 -238975459 + L2 LINE L2 3006 3268 -4 23 0 0 0 chr2 14281246 14281269 -238975314 + AT_rich Low_complexity Low_complexity 1 23 0 189 390 52 19 chr2 14281967 14282121 -238974462 - MER5A DNA MER1_type -7 182 24 7185 103 9 22 chr2 14282472 14283557 -238973026 - MER11C LTR ERVK 0 1071 1 313 273 80 0 chr2 14283763 14283851 -238972732 + L2 LINE L2 3219 3313 0 484 316 85 16 chr2 14283900 14284207 -238972376 - LTR16A LTR ERVL -8 442 115 3852 164 10 13 chr2 14284554 14285267 -238971316 - MER50 LTR ERV1 -23 711 1 201 143 0 0 chr2 14288859 14288894 -238967689 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 210 194 0 0 chr2 14289284 14289346 -238967237 + (TAAA)n Simple_repeat Simple_repeat 3 64 0 591 157 86 60 chr2 14289485 14289668 -238966915 + MLT1B LTR MaLR 8 180 -194 1520 155 26 3 chr2 14290631 14290935 -238965648 - L1MA1 LINE L1 -58 6244 5934 1048 170 12 69 chr2 14291219 14291344 -238965239 + MER96B DNA MER1_type? 3 109 -308 2380 90 7 0 chr2 14291344 14291643 -238964940 + AluSq SINE Alu 1 301 -12 1048 170 12 69 chr2 14291643 14291764 -238964819 + MER96B DNA MER1_type? 109 235 -182 283 361 80 53 chr2 14294313 14294576 -238962007 - L2 LINE L2 -576 2738 2469 1361 209 46 19 chr2 14294926 14295381 -238961202 + MLT2A2 LTR ERVL 2 475 -40 388 89 33 22 chr2 14295381 14295471 -238961112 + (TA)n Simple_repeat Simple_repeat 2 92 0 331 111 0 0 chr2 14295471 14295525 -238961058 + MLT2A2 LTR ERVL 400 453 0 184 348 43 31 chr2 14295563 14295724 -238960859 + L2 LINE L2 2796 2958 -356 2770 256 23 56 chr2 14296012 14297300 -238959283 - L1M2 LINE L1 -2805 3577 2329 2541 223 57 16 chr2 14297316 14298038 -238958545 + L1M2 LINE L1 3571 4329 -2053 2149 85 17 0 chr2 14298038 14298331 -238958252 + AluY SINE Alu 1 298 -13 2541 223 57 16 chr2 14298331 14298401 -238958182 + L1M2 LINE L1 4329 4395 -1987 1301 169 66 42 chr2 14298529 14298873 -238957710 + Tigger7 DNA MER2_type 129 2431 -56 6474 194 127 29 chr2 14298873 14300472 -238956111 + MER52A LTR ERV1 1 1755 0 253 267 17 0 chr2 14300472 14300530 -238956053 + Tigger7 DNA MER2_type 2428 2486 -1 2373 192 27 10 chr2 14300533 14301338 -238955245 + L1M2 LINE L1 5203 6022 -526 354 344 23 0 chr2 14301900 14302028 -238954555 - L2 LINE L2 0 3313 3183 869 167 48 0 chr2 14303197 14303383 -238953200 + L1MA4A LINE L1 6098 6292 -11 201 407 11 0 chr2 14303500 14303591 -238952992 - MIR SINE MIR -77 131 40 14847 181 27 19 chr2 14303899 14306089 -238950494 + L1PA14 LINE L1 2049 4280 -1881 423 0 0 0 chr2 14306089 14306136 -238950447 + (TG)n Simple_repeat Simple_repeat 2 48 0 14847 181 27 19 chr2 14306136 14308034 -238948549 + L1PA14 LINE L1 4280 6161 0 360 64 0 0 chr2 14308075 14308122 -238948461 + (TG)n Simple_repeat Simple_repeat 2 48 0 260 281 110 12 chr2 14308195 14308277 -238948306 + MIR SINE MIR 30 119 -89 553 201 140 49 chr2 14308936 14309100 -238947483 + AluJb SINE Alu 134 312 0 277 195 11 23 chr2 14309108 14309195 -238947388 + GA-rich Low_complexity Low_complexity 5 90 0 259 295 0 54 chr2 14310657 14310786 -238945797 - ERVL LTR ERVL -384 5380 5259 1241 126 0 11 chr2 14310944 14311118 -238945465 - AluSg/x SINE Alu -9 303 132 567 250 133 28 chr2 14311126 14311306 -238945277 - ERVL LTR ERVL -691 5073 4875 2604 191 55 3 chr2 14311345 14311494 -238945089 + L1 LINE L1 4000 4140 -2006 216 0 0 0 chr2 14311494 14311518 -238945065 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 2604 191 55 3 chr2 14311518 14311945 -238944638 + L1 LINE L1 4140 4606 -1540 1173 239 71 13 chr2 14311969 14312342 -238944241 + L1 LINE L1 4950 5347 -799 180 0 0 0 chr2 14312342 14312362 -238944221 + (CTTG)n Simple_repeat Simple_repeat 2 21 0 1567 174 20 10 chr2 14312368 14312771 -238943812 - AluJo SINE Alu 0 407 2 2416 158 16 13 chr2 14312771 14313218 -238943365 + L1P5 LINE L1 5338 5785 -371 2041 85 17 30 chr2 14313218 14313513 -238943070 + AluY SINE Alu 1 291 -20 3796 260 53 39 chr2 14313518 14315585 -238940998 + L1ME LINE L1 3424 5528 -634 495 193 35 0 chr2 14316463 14316608 -238939975 + GA-rich Low_complexity Low_complexity 1 150 0 252 198 25 12 chr2 14317934 14318015 -238938568 + CT-rich Low_complexity Low_complexity 1 82 0 996 208 88 0 chr2 14318027 14318243 -238938340 - MLT1D LTR MaLR -270 235 1 2281 211 88 36 chr2 14318243 14319020 -238937563 + L1MDa LINE L1 1686 2502 -4038 1972 178 0 0 chr2 14319049 14319358 -238937225 + AluSx SINE Alu 1 309 -3 1613 192 0 51 chr2 14319487 14319800 -238936783 - AluJo SINE Alu -13 299 3 303 276 24 47 chr2 14319922 14320049 -238936534 - MIR SINE MIR -112 150 27 239 341 57 51 chr2 14321007 14321183 -238935400 + MIR3 SINE MIR 30 206 -2 300 333 24 16 chr2 14321486 14321609 -238934974 - MIR3 SINE MIR -83 125 2 199 327 82 9 chr2 14322592 14322702 -238933881 + MIR SINE MIR 33 150 -58 1793 182 3 3 chr2 14323606 14323914 -238932669 - AluJb SINE Alu -4 308 1 181 328 35 26 chr2 14324145 14324261 -238932322 + MIR3 SINE MIR 63 179 -29 212 277 60 12 chr2 14325245 14325328 -238931255 + MIR SINE MIR 17 103 -105 1758 158 3 11 chr2 14326660 14326984 -238929599 + AluSx SINE Alu 1 322 0 188 375 80 9 chr2 14327513 14327625 -238928958 + L2 LINE L2 3116 3235 -37 246 128 0 0 chr2 14327817 14327856 -238928727 + (GGATG)n Simple_repeat Simple_repeat 1 39 0 347 296 0 0 chr2 14327927 14328015 -238928568 - MIR SINE MIR -23 239 152 4678 205 103 16 chr2 14328068 14329342 -238927241 - Charlie1a DNA MER1_type -48 1407 24 286 290 100 10 chr2 14329367 14329467 -238927116 - MIR SINE MIR -120 142 34 1216 292 112 72 chr2 14330001 14331148 -238925435 + L2 LINE L2 1571 2762 -552 441 306 169 31 chr2 14331199 14331555 -238925028 + L2 LINE L2 2888 3292 -21 1939 133 3 7 chr2 14331673 14331959 -238924624 + AluSx SINE Alu 1 285 -27 10858 184 12 7 chr2 14332177 14335507 -238921076 + L1PB1 LINE L1 2803 6149 -2 337 319 0 0 chr2 14335532 14335623 -238920960 - MIR SINE MIR -170 92 2 413 304 37 51 chr2 14335975 14336076 -238920507 - MIR SINE MIR -1 261 160 1932 168 123 8 chr2 14336076 14336458 -238920125 - MSTA LTR MaLR 0 428 3 413 304 37 51 chr2 14336458 14336570 -238920013 - MIR SINE MIR -102 160 51 212 389 40 16 chr2 14336592 14336718 -238919865 - L2 LINE L2 -257 3015 2887 2441 144 67 8 chr2 14336830 14337232 -238919351 + MSTA LTR MaLR 3 428 0 21 57 0 0 chr2 14337875 14337910 -238918673 + AT_rich Low_complexity Low_complexity 1 35 0 2148 134 0 6 chr2 14337970 14338283 -238918300 + AluSx SINE Alu 1 311 -1 538 290 70 11 chr2 14339454 14339640 -238916943 - MIR SINE MIR -15 247 51 777 209 55 0 chr2 14339840 14340003 -238916580 - L1PA16 LINE L1 -4 6162 5991 375 265 56 31 chr2 14340327 14340489 -238916094 + MLT1C LTR MaLR 302 467 0 270 81 0 0 chr2 14340878 14340915 -238915668 + (CA)n Simple_repeat Simple_repeat 2 38 0 2144 149 49 0 chr2 14341461 14341811 -238914772 + L1MC1 LINE L1 5459 5825 -508 510 341 17 17 chr2 14342907 14343086 -238913497 + MIR SINE MIR 2 180 -82 291 289 248 8 chr2 14343109 14343230 -238913353 + L3 LINE CR1 1411 1560 -17 334 250 36 91 chr2 14343376 14343602 -238912981 + MIR SINE MIR 10 216 -46 1131 157 47 51 chr2 14345114 14345156 -238911427 + MER92B LTR ERV1 1 42 -594 2044 117 14 51 chr2 14345156 14345506 -238911077 + MER1B DNA MER1_type 1 337 0 1131 157 47 51 chr2 14345506 14345698 -238910885 + MER92B LTR ERV1 42 234 -402 494 178 47 0 chr2 14345704 14345811 -238910772 + MER92B LTR ERV1 525 636 0 202 321 124 37 chr2 14346471 14346689 -238909894 + MIR SINE MIR 20 256 -6 377 238 209 10 chr2 14347194 14347400 -238909183 + L1MC4 LINE L1 6459 6705 -1337 204 296 10 10 chr2 14347442 14347540 -238909043 + (TA)n Simple_repeat Simple_repeat 2 99 0 2025 261 54 11 chr2 14347540 14348185 -238908398 + L1MC4 LINE L1 6652 7324 -718 1563 217 42 17 chr2 14348195 14348600 -238907983 - LTR52 LTR ERVL -2 419 5 3718 258 32 21 chr2 14348605 14349594 -238906989 - LTR52-int LTR ERVL -1 3555 2328 2196 187 80 133 chr2 14349614 14350410 -238906173 - LTR28 LTR ERV1 0 1020 119 337 207 89 59 chr2 14350421 14350556 -238906027 - MER61B LTR ERV1 -286 139 1 950 221 0 44 chr2 14350556 14350782 -238905801 - LTR52-int LTR ERVL -1130 2426 2211 532 273 28 0 chr2 14350798 14350941 -238905642 + LTR52 LTR ERVL 259 405 -16 1656 233 68 68 chr2 14350954 14351662 -238904921 + L1MC4 LINE L1 7328 8035 -7 1620 249 98 18 chr2 14351746 14352685 -238903898 + L1ME3 LINE L1 5089 6127 -35 2195 115 3 0 chr2 14352782 14353078 -238903505 + AluSq SINE Alu 1 297 -16 7422 45 0 0 chr2 14353994 14354911 -238901672 + L1PA5 LINE L1 5235 6151 -3 328 294 89 44 chr2 14354917 14355097 -238901486 + L2 LINE L2 2619 2806 -508 4986 183 23 12 chr2 14356610 14358126 -238898457 + L1MA9 LINE L1 4784 6312 0 2503 139 10 17 chr2 14358993 14359409 -238897174 - MSTB LTR MaLR -10 405 5 1807 191 32 30 chr2 14359432 14359987 -238896596 + MLT2A2 LTR ERVL 3 554 0 5539 185 53 26 chr2 14359993 14361596 -238894987 - MLT1A1-int LTR MaLR -19 1632 6 202 329 12 12 chr2 14361682 14361767 -238894816 + MIR SINE MIR 53 137 -125 3697 208 32 11 chr2 14361802 14362786 -238893797 - Charlie1a DNA MER1_type 0 1455 372 1442 207 138 12 chr2 14362786 14363192 -238893391 + MER119 DNA MER1_type 1 457 -126 * 3797 149 42 8 chr2 14363169 14363907 -238892676 + Tigger3(Golem) DNA MER2_type 2266 3028 -1 1325 232 68 11 chr2 14364028 14364382 -238892201 - Charlie1a DNA MER1_type -1077 378 5 207 0 0 0 chr2 14364631 14364654 -238891929 + (T)n Simple_repeat Simple_repeat 1 23 0 1134 347 15 15 chr2 14365641 14366186 -238890397 - ERVL LTR ERVL -516 5248 4704 296 205 39 128 chr2 14366356 14366512 -238890071 - MLT1A1 LTR MaLR 0 396 255 577 200 63 117 chr2 14366571 14366776 -238889807 - MLT1A1 LTR MaLR -171 194 1 2625 245 113 78 chr2 14366776 14368030 -238888553 - MLT1A1-int LTR MaLR 0 1651 383 2161 126 3 3 chr2 14368030 14368332 -238888251 - AluSg SINE Alu -8 302 1 2625 245 113 78 chr2 14368332 14368727 -238887856 - MLT1A1-int LTR MaLR -1268 383 3 836 236 10 10 chr2 14368728 14368923 -238887660 - MLT1A1 LTR MaLR 0 365 171 893 182 25 45 chr2 14368938 14369136 -238887447 - MLT1A1 LTR MaLR -171 194 1 1438 188 177 24 chr2 14369241 14369672 -238886911 + MER66A LTR ERV1 97 474 -4 1372 235 92 40 chr2 14369680 14370204 -238886379 + MER66A-int LTR ERV1 1 551 -6125 7625 229 27 20 chr2 14370305 14372924 -238883659 + MER66A-int LTR ERV1 737 3120 -3211 436 236 0 18 chr2 14372902 14373012 -238883571 + MER66A-int LTR ERV1 3337 3444 -3232 * 394 273 9 0 chr2 14372950 14373060 -238883523 + LTR57-int LTR ERVL 1319 1429 -3914 * 1805 214 30 90 chr2 14373062 14373797 -238882786 + MER66A-int LTR ERV1 3744 4434 -2242 1482 228 0 0 chr2 14373812 14374119 -238882464 + AluJb SINE Alu 1 307 0 275 241 76 25 chr2 14374120 14374199 -238882384 + MER4B LTR ERV1 79 161 -449 386 225 58 58 chr2 14374200 14374338 -238882245 + MER66A-int LTR ERV1 5915 6052 -1704 2459 171 5 2 chr2 14374339 14374765 -238881818 + MER66A-int LTR ERV1 6250 6676 0 1473 196 72 56 chr2 14374802 14375254 -238881329 + MER66A LTR ERV1 97 478 0 669 333 44 43 chr2 14375882 14376240 -238880343 - HERVL LTR ERVL -1796 3702 3346 1157 240 66 6 chr2 14376240 14376557 -238880026 - MER58B DNA MER1_type -4 337 2 669 333 44 43 chr2 14376557 14376964 -238879619 - HERVL LTR ERVL -2152 3346 2939 282 266 48 8 chr2 14377084 14377208 -238879375 - L1ME3 LINE L1 -11 6151 6023 310 238 79 0 chr2 14377274 14377375 -238879208 - L1ME3 LINE L1 -272 5890 5782 2053 146 0 7 chr2 14377557 14377865 -238878718 + AluSq SINE Alu 1 306 -7 23 0 0 0 chr2 14378133 14378156 -238878427 + AT_rich Low_complexity Low_complexity 1 23 0 211 218 18 0 chr2 14428685 14428740 -238827843 + T-rich Low_complexity Low_complexity 4 59 0 2184 116 3 26 chr2 14428745 14429056 -238827527 - AluSq SINE Alu -9 304 1 2187 115 0 3 chr2 14429743 14430048 -238826535 + AluSx SINE Alu 1 304 -8 1915 140 48 0 chr2 14430754 14431046 -238825537 + AluSx SINE Alu 1 306 -6 219 203 0 0 chr2 14431903 14431962 -238824621 + (AATTG)n Simple_repeat Simple_repeat 2 60 0 399 323 118 4 chr2 14432196 14432425 -238824158 + MIR SINE MIR 2 256 -6 25 0 0 0 chr2 14433818 14433843 -238822740 + AT_rich Low_complexity Low_complexity 1 25 0 578 242 107 11 chr2 14434397 14434575 -238822008 + MIR SINE MIR 68 262 0 1095 252 93 45 chr2 14435606 14436141 -238820442 + MLT1E1 LTR MaLR 17 577 -77 341 290 145 0 chr2 14437066 14437252 -238819331 - L3 LINE CR1 -151 1426 1214 305 252 98 8 chr2 14437994 14438117 -238818466 + L1ME1 LINE L1 6021 6154 -12 2080 121 3 0 chr2 14438158 14438440 -238818143 + AluSq SINE Alu 1 283 -30 426 65 0 0 chr2 14438440 14438502 -238818081 + (TC)n Simple_repeat Simple_repeat 1 62 0 234 0 0 0 chr2 14438502 14438528 -238818055 + (TA)n Simple_repeat Simple_repeat 1 26 0 3879 176 46 24 chr2 14438528 14439537 -238817046 + L1MB8 LINE L1 5144 6175 -3 506 277 93 46 chr2 14439560 14439884 -238816699 + L1MC/D LINE L1 5279 5607 -854 474 306 71 39 chr2 14440739 14441049 -238815534 - L2 LINE L2 -153 3160 2841 1649 178 7 58 chr2 14441059 14441469 -238815114 + L1 LINE L1 4518 4906 -1240 1186 325 82 32 chr2 14441469 14442077 -238814506 - L2 LINE L2 -601 2713 2060 861 263 9 9 chr2 14442077 14442301 -238814282 - MER58A DNA MER1_type 0 224 1 1186 325 82 32 chr2 14442301 14442436 -238814147 - L2 LINE L2 -1254 2060 1933 1715 169 121 51 chr2 14442597 14442753 -238813830 + MLT1D LTR MaLR 1 145 -360 2243 182 37 13 chr2 14442753 14443209 -238813374 + MLT1C LTR MaLR 1 467 0 1715 169 121 51 chr2 14443209 14443372 -238813211 + MLT1D LTR MaLR 145 295 -210 3579 133 2 4 chr2 14443372 14443900 -238812683 - MER1A DNA MER1_type 0 527 1 1715 169 121 51 chr2 14443900 14444051 -238812532 + MLT1D LTR MaLR 295 505 0 524 316 102 0 chr2 14444979 14445204 -238811379 - MIR SINE MIR -9 253 6 287 323 120 0 chr2 14446210 14446368 -238810215 + MIR3 SINE MIR 26 202 -6 341 323 8 15 chr2 14446385 14446515 -238810068 + MIR SINE MIR 124 252 -10 195 381 50 50 chr2 14446777 14446995 -238809588 + L2 LINE L2 2872 3089 -183 476 299 43 16 chr2 14447056 14447240 -238809343 + L2 LINE L2 3120 3308 -5 282 294 10 58 chr2 14449059 14449224 -238807359 + MIR3 SINE MIR 72 197 -11 298 226 103 29 chr2 14449800 14449886 -238806697 - MIR SINE MIR -97 111 21 516 226 75 15 chr2 14449918 14450051 -238806532 - MIR3 SINE MIR -62 146 6 2206 100 4 0 chr2 14450220 14450525 -238806058 - AluSp SINE Alu 0 306 1 854 178 0 0 chr2 14450663 14450798 -238805785 + AluJb SINE Alu 1 135 -177 1332 199 72 0 chr2 14450798 14451075 -238805508 + AluJo SINE Alu 1 297 -15 188 239 62 62 chr2 14451290 14451403 -238805180 + L2 LINE L2 2679 2791 -523 222 37 0 0 chr2 14451675 14451702 -238804881 + (TG)n Simple_repeat Simple_repeat 1 27 0 1435 183 56 58 chr2 14452448 14452648 -238803935 + MLT1A1 LTR MaLR 5 206 -159 1921 156 0 0 chr2 14452648 14452963 -238803620 + AluSx SINE Alu 1 315 0 1435 183 56 58 chr2 14452963 14453121 -238803462 + MLT1A1 LTR MaLR 206 363 -2 405 0 0 0 chr2 14453122 14453167 -238803416 + (TAGA)n Simple_repeat Simple_repeat 1 45 0 2280 119 0 3 chr2 14453270 14453581 -238803002 - AluSg SINE Alu 0 310 1 21 0 0 0 chr2 14453905 14453926 -238802657 + AT_rich Low_complexity Low_complexity 1 21 0 484 291 97 34 chr2 14453926 14454163 -238802420 - MIR SINE MIR -3 259 8 2245 97 3 10 chr2 14455668 14455967 -238800616 + AluSg SINE Alu 1 297 -13 362 390 22 7 chr2 14456030 14456166 -238800417 + L3 LINE CR1 1427 1564 -13 256 298 0 0 chr2 14456351 14456408 -238800175 + MIR SINE MIR 67 123 -85 208 231 22 66 chr2 14456480 14456571 -238800012 + MIR3 SINE MIR 122 208 0 250 302 35 12 chr2 14457349 14457435 -238799148 - MIR SINE MIR -6 256 169 962 279 24 16 chr2 14457706 14458075 -238798508 - LTR52 LTR ERVL -35 386 15 2350 83 3 6 chr2 14458076 14458388 -238798195 + AluY SINE Alu 1 311 0 583 234 28 0 chr2 14458405 14458546 -238798037 - L1MA6 LINE L1 -63 6237 6093 284 256 0 0 chr2 14458535 14458617 -238797966 + L1MA6 LINE L1 6212 6293 -7 * 380 281 52 9 chr2 14458643 14458853 -238797730 + LTR52 LTR ERVL 174 392 -29 37 0 0 0 chr2 14458860 14458897 -238797686 + AT_rich Low_complexity Low_complexity 1 37 0 270 327 48 0 chr2 14459484 14459588 -238796995 - MER91C DNA MER1_type -31 109 1 * 307 274 0 0 chr2 14459588 14459660 -238796923 - MIR SINE MIR -145 117 46 1354 319 85 26 chr2 14460464 14461312 -238795271 - L2 LINE L2 -187 3126 2224 196 236 55 136 chr2 14461465 14461538 -238795045 - L2 LINE L2 0 3272 3209 2108 138 0 0 chr2 14461538 14461842 -238794741 + AluSg SINE Alu 1 304 -6 196 236 55 136 chr2 14461842 14461878 -238794705 - L2 LINE L2 -63 3209 3172 195 323 61 20 chr2 14461959 14462058 -238794525 - L2 LINE L2 -218 3054 2952 430 337 138 25 chr2 14462218 14462544 -238794039 - L2 LINE L2 -556 2758 2396 330 307 38 99 chr2 14462548 14462760 -238793823 + MIR SINE MIR 31 229 -33 1950 202 46 6 chr2 14462763 14463243 -238793340 + MLT1D LTR MaLR 2 500 -5 740 86 17 26 chr2 14463881 14463998 -238792585 + AluSp/q SINE Alu 196 311 -2 206 146 229 0 chr2 14464019 14464067 -238792516 + MIR SINE MIR 89 147 -115 234 0 0 0 chr2 14465542 14465568 -238791015 + (A)n Simple_repeat Simple_repeat 1 26 0 185 309 55 82 chr2 14466185 14466295 -238790288 + MIR SINE MIR 37 143 -65 304 250 9 78 chr2 14467212 14467328 -238789255 - MIR SINE MIR -44 218 111 326 289 122 28 chr2 14467912 14468092 -238788491 - MIR3 SINE MIR -7 201 5 1039 32 6 26 chr2 14468144 14468300 -238788283 + (TAGA)n Simple_repeat Simple_repeat 2 154 0 1886 110 4 0 chr2 14468301 14468555 -238788028 - AluSq SINE Alu -29 284 30 2179 120 7 0 chr2 14468962 14469254 -238787329 + AluSg SINE Alu 1 294 -16 239 345 26 9 chr2 14469762 14469875 -238786708 + MIR SINE MIR 28 142 -120 183 243 0 100 chr2 14471797 14471867 -238784716 + MIR SINE MIR 133 195 -67 2570 55 0 0 chr2 14472487 14472798 -238783785 + AluY SINE Alu 1 311 0 237 374 116 55 chr2 14472991 14473320 -238783263 - L2 LINE L2 -1 3271 2923 1859 162 131 8 chr2 14473512 14473894 -238782689 - MER70B LTR ERVL -147 431 3 1904 139 17 7 chr2 14473996 14474290 -238782293 - AluJb SINE Alu -15 297 1 933 221 31 12 chr2 14474291 14474549 -238782034 - L1MDa LINE L1 -4539 2001 1739 536 243 0 0 chr2 14474552 14474663 -238781920 - MLT1C LTR MaLR -356 111 1 218 405 9 40 chr2 14474979 14475206 -238781377 - L2 LINE L2 -159 3113 2894 250 263 168 11 chr2 14475308 14475403 -238781180 + MIR SINE MIR 22 131 -131 337 353 15 7 chr2 14475504 14475640 -238780943 + MER91A DNA MER1_type 20 156 -40 419 318 145 14 chr2 14476153 14476367 -238780216 + MIR SINE MIR 5 246 -16 1817 184 0 3 chr2 14476902 14477196 -238779387 + AluJb SINE Alu 3 295 -17 230 318 0 59 chr2 14477536 14477621 -238778962 + MIR SINE MIR 7 86 -176 180 317 0 0 chr2 14477682 14477723 -238778860 + L2 LINE L2 3212 3252 -20 345 237 88 18 chr2 14477841 14477955 -238778628 + L2 LINE L2 3192 3313 0 5061 164 24 10 chr2 14478133 14479433 -238777150 - L1MA7 LINE L1 -10 6281 4963 5275 170 11 15 chr2 14479433 14480530 -238776053 + L1MA7 LINE L1 3865 4957 -1189 192 347 27 13 chr2 14480665 14480740 -238775843 + MIR SINE MIR 20 95 -167 22 0 0 0 chr2 14480983 14481005 -238775578 + AT_rich Low_complexity Low_complexity 1 22 0 2115 113 21 0 chr2 14481765 14482056 -238774527 + AluSc SINE Alu 1 297 -12 1860 181 72 31 chr2 14483529 14483985 -238772598 + MLT1D LTR MaLR 1 480 -25 1777 139 48 37 chr2 14483985 14484337 -238772246 - MER46B DNA MER2_type -4 232 2 1860 181 72 31 chr2 14484337 14484365 -238772218 + MLT1D LTR MaLR 480 505 0 21 0 0 0 chr2 14485465 14485486 -238771097 + AT_rich Low_complexity Low_complexity 1 21 0 938 180 22 6 chr2 14487412 14487595 -238768988 + MER5A DNA MER1_type 4 189 0 482 312 13 51 chr2 14488988 14489145 -238767438 + MIR3 SINE MIR 27 177 -31 1213 186 94 60 chr2 14489376 14489460 -238767123 + MLT1A1 LTR MaLR 1 81 -284 1559 77 0 14 chr2 14489460 14489669 -238766914 + AluY SINE Alu 105 310 -1 1213 186 94 60 chr2 14489669 14489934 -238766649 + MLT1A1 LTR MaLR 81 362 -3 554 302 217 1 chr2 14493243 14493451 -238763132 + MIR SINE MIR 3 252 -10 336 262 43 14 chr2 14494632 14494773 -238761810 + L1ME4a LINE L1 5738 5882 -239 269 318 130 21 chr2 14495431 14495623 -238760960 - MIR SINE MIR 0 262 50 867 190 63 0 chr2 14495910 14496084 -238760499 - L1PB4 LINE L1 0 6156 5972 225 239 128 9 chr2 14496265 14496374 -238760209 - MIR SINE MIR -15 247 126 439 304 87 33 chr2 14496498 14497014 -238759569 + L1ME4a LINE L1 5561 6104 -17 282 73 0 0 chr2 14498077 14498118 -238758465 + (TC)n Simple_repeat Simple_repeat 2 42 0 1880 229 29 43 chr2 14498246 14498761 -238757822 + MLT2B3 LTR ERVL 1 508 -46 489 143 0 0 chr2 14498772 14498856 -238757727 + MLT2A2 LTR ERVL 366 449 -4 226 261 54 0 chr2 14499129 14499221 -238757362 + GA-rich Low_complexity Low_complexity 3 99 0 811 192 0 0 chr2 14499679 14499809 -238756774 - FRAM SINE Alu -38 138 9 186 244 81 105 chr2 14500476 14500562 -238756021 - L3b LINE CR1 -232 1351 1268 288 312 81 102 chr2 14500656 14500766 -238755817 + MIR3 SINE MIR 17 123 -85 1033 203 74 7 chr2 14500766 14501062 -238755521 + MER33 DNA MER1_type 5 320 -4 288 312 81 102 chr2 14501062 14501137 -238755446 + MIR3 SINE MIR 123 198 -10 281 287 8 74 chr2 14503045 14503167 -238753416 - MIR3 SINE MIR -36 172 59 2739 91 10 5 chr2 14503506 14503904 -238752679 + MLT2A1 LTR ERVL 1 400 -44 243 0 0 0 chr2 14503930 14503957 -238752626 + (TA)n Simple_repeat Simple_repeat 2 28 0 366 74 0 0 chr2 14503957 14504011 -238752572 + MLT2A1 LTR ERVL 399 452 -1 1785 157 13 0 chr2 14504786 14505086 -238751497 - L1MB1 LINE L1 -122 6046 5743 622 149 70 0 chr2 14505086 14505190 -238751393 + L1MB1 LINE L1 6047 6168 0 275 229 16 0 chr2 14505210 14505271 -238751312 + MIR SINE MIR 198 259 -3 277 209 0 45 chr2 14505282 14505300 -238751283 + AluSg/x SINE Alu 121 135 -167 2197 120 3 0 chr2 14505300 14505600 -238750983 + AluSq SINE Alu 1 301 -12 841 209 18 0 chr2 14506124 14506287 -238750296 + FRAM SINE Alu 1 166 0 23 0 0 0 chr2 14506327 14506350 -238750233 + AT_rich Low_complexity Low_complexity 1 23 0 324 224 88 20 chr2 14506376 14506523 -238750060 + L1MDb LINE L1 1194 1350 -5059 426 223 47 47 chr2 14506562 14506710 -238749873 + L1M4 LINE L1 4203 4350 -1796 216 342 90 34 chr2 14506916 14507150 -238749433 + L2 LINE L2 2989 3235 -37 268 278 56 68 chr2 14507470 14507632 -238748951 + MIR SINE MIR 89 248 -14 2321 67 0 41 chr2 14507713 14508028 -238748555 + AluY SINE Alu 1 302 -9 1088 141 6 0 chr2 14508038 14508208 -238748375 + AluSg/x SINE Alu 142 312 0 456 227 45 9 chr2 14510130 14510240 -238746343 - MLT1I LTR MaLR 0 409 296 1404 213 59 0 chr2 14510784 14511057 -238745526 - AluSx SINE Alu -23 289 1 23 0 0 0 chr2 14511932 14511955 -238744628 + AT_rich Low_complexity Low_complexity 1 23 0 420 147 0 0 chr2 14512492 14512567 -238744016 + (GGAA)n Simple_repeat Simple_repeat 3 77 0 253 293 54 27 chr2 14512840 14512987 -238743596 - L1ME3A LINE L1 -15 6155 6005 363 284 0 20 chr2 14513557 14513659 -238742924 - MIR3 SINE MIR -26 182 83 2114 136 3 0 chr2 14514128 14514437 -238742146 - AluSx SINE Alu -2 310 1 1514 166 147 3 chr2 14514817 14515130 -238741453 + MER46B DNA MER2_type 1 233 -3 399 344 22 28 chr2 14515143 14515323 -238741260 - MIR3 SINE MIR -15 193 15 215 167 24 0 chr2 14515451 14515493 -238741090 + MIR SINE MIR 108 150 -112 220 277 46 0 chr2 14515574 14515639 -238740944 + MIR SINE MIR 81 148 -114 420 313 8 15 chr2 14516939 14517073 -238739510 - MER5B DNA MER1_type -42 136 4 205 146 42 0 chr2 14517297 14517345 -238739238 + (TA)n Simple_repeat Simple_repeat 2 51 0 287 268 12 12 chr2 14518408 14518490 -238738093 - MLT1I LTR MaLR -6 403 322 267 224 95 82 chr2 14518659 14518806 -238737777 - MLT1J2 LTR MaLR -301 149 1 180 328 78 16 chr2 14518841 14518905 -238737678 - L2 LINE L2 -229 3084 3017 206 316 45 51 chr2 14519161 14519338 -238737245 + L2 LINE L2 2435 2610 -704 744 168 41 77 chr2 14519349 14519545 -238737038 + MLT1A2 LTR MaLR 13 201 -164 2212 141 29 6 chr2 14519555 14519902 -238736681 - THE1A LTR MaLR 0 355 1 2266 69 14 0 chr2 14519902 14520192 -238736391 - THE1A-int LTR MaLR 0 1580 1287 775 218 26 0 chr2 14520192 14520348 -238736235 + MLT1A2 LTR MaLR 215 374 0 280 321 115 48 chr2 14520527 14520857 -238735726 + L2 LINE L2 2916 3267 -5 1812 106 0 109 chr2 14521040 14521361 -238735222 + AluSc SINE Alu 3 288 -21 647 338 14 0 chr2 14521366 14521576 -238735007 - MIR SINE MIR -8 254 42 706 339 77 50 chr2 14522242 14522632 -238733951 - L2 LINE L2 0 3272 2894 2079 123 0 0 chr2 14522632 14522950 -238733633 + AluSx SINE Alu 1 318 0 706 339 77 50 chr2 14522950 14524217 -238732366 - L2 LINE L2 -378 2894 1496 191 327 67 19 chr2 14524376 14524480 -238732103 + MIR3 SINE MIR 4 112 -96 442 291 16 16 chr2 14524687 14524814 -238731769 - MER5A DNA MER1_type -23 166 40 1119 234 58 69 chr2 14526103 14526552 -238730031 - MLT1J2 LTR MaLR 0 450 7 603 272 113 25 chr2 14527216 14527455 -238729128 - MIR SINE MIR 0 262 3 223 303 0 30 chr2 14528524 14528590 -238727993 + MIR SINE MIR 82 145 -63 183 156 0 0 chr2 14529877 14529909 -238726674 + (AGCGG)n Simple_repeat Simple_repeat 2 33 0 212 158 0 0 chr2 14530385 14530423 -238726160 + (CA)n Simple_repeat Simple_repeat 2 39 0 25 31 0 0 chr2 14531707 14531739 -238724844 + GC_rich Low_complexity Low_complexity 1 32 0 26 64 0 0 chr2 14532285 14532332 -238724251 + GC_rich Low_complexity Low_complexity 1 47 0 189 107 0 0 chr2 14534179 14534207 -238722376 + (TTTTC)n Simple_repeat Simple_repeat 3 30 0 189 0 0 0 chr2 14535546 14535567 -238721016 + (A)n Simple_repeat Simple_repeat 1 21 0 330 253 0 0 chr2 14536286 14536385 -238720198 + (TA)n Simple_repeat Simple_repeat 2 100 0 225 0 0 0 chr2 14536436 14536461 -238720122 + (CA)n Simple_repeat Simple_repeat 2 26 0 746 154 51 82 chr2 14538247 14538442 -238718141 + MER53 DNA DNA 1 189 0 193 346 121 25 chr2 14538941 14539210 -238717373 + L2 LINE L2 2760 3047 -225 228 384 26 20 chr2 14543211 14543362 -238713221 - MIR SINE MIR -79 183 32 1444 200 67 67 chr2 14544801 14545166 -238711417 + MLT1A1 LTR MaLR 1 383 0 1800 221 84 12 chr2 14545589 14546077 -238710506 - Charlie1b DNA MER1_type 0 523 1 2004 184 17 6 chr2 14547089 14547442 -238709141 + MLT1A1 LTR MaLR 2 358 -7 640 318 23 10 chr2 14547931 14548233 -238708350 - L1ME4a LINE L1 -218 5903 5598 779 299 36 21 chr2 14548738 14549125 -238707458 - L1ME LINE L1 -530 5574 5189 1822 117 4 0 chr2 14549348 14549624 -238706959 + AluY SINE Alu 34 310 0 451 265 89 63 chr2 14549844 14550200 -238706383 - L1ME LINE L1 -1094 4986 4606 639 305 5 5 chr2 14550210 14550410 -238706173 - L1ME LINE L1 -1979 4101 3902 1966 261 80 10 chr2 14550415 14551013 -238705570 + L1ME3A LINE L1 5446 6085 -85 27 29 0 0 chr2 14551013 14551047 -238705536 + AT_rich Low_complexity Low_complexity 1 34 0 334 341 14 7 chr2 14551167 14551305 -238705278 + MIR3 SINE MIR 59 197 -11 1580 219 42 28 chr2 14551534 14551894 -238704689 - MLT1A1 LTR MaLR 0 365 1 593 289 107 39 chr2 14552217 14552581 -238704002 + MLT1J LTR MaLR 123 511 0 767 278 92 48 chr2 14553263 14553634 -238702949 - L2 LINE L2 -7 3306 2920 216 256 0 0 chr2 14553995 14554034 -238702549 - L2 LINE L2 -33 3239 3201 274 294 179 32 chr2 14554181 14554399 -238702184 + MIR SINE MIR 13 262 0 355 245 19 3 chr2 14554522 14554650 -238701933 - HsTC2 DNA Tc2 -44 1854 6 778 258 129 7 chr2 14555039 14555787 -238700796 - L1ME LINE L1 -3242 2838 1923 920 304 86 54 chr2 14555797 14557381 -238699202 - L1ME LINE L1 -4376 1885 3 263 295 71 45 chr2 14557390 14557502 -238699081 + MER5B DNA MER1_type 41 155 -23 27 0 0 0 chr2 14558043 14558070 -238698513 + AT_rich Low_complexity Low_complexity 1 27 0 27 29 0 0 chr2 14558256 14558290 -238698293 + AT_rich Low_complexity Low_complexity 1 34 0 327 25 0 0 chr2 14559052 14559092 -238697491 + (TG)n Simple_repeat Simple_repeat 2 41 0 2782 40 0 0 chr2 14559263 14559613 -238696970 - L1PA2 LINE L1 -838 5308 4959 7552 9 2 0 chr2 14559613 14560470 -238696113 + L1PA2 LINE L1 5295 6155 0 311 258 43 86 chr2 14561474 14561660 -238694923 - L1ME LINE L1 -532 5589 5412 27 62 0 0 chr2 14561699 14561747 -238694836 + AT_rich Low_complexity Low_complexity 1 48 0 252 122 0 0 chr2 14561747 14561788 -238694795 + (TA)n Simple_repeat Simple_repeat 2 42 0 958 155 7 7 chr2 14561789 14561944 -238694639 - AluSg/x SINE Alu -21 291 137 246 164 0 0 chr2 14562117 14562172 -238694411 + (TA)n Simple_repeat Simple_repeat 2 56 0 321 345 20 14 chr2 14562349 14562497 -238694086 - LTR67 LTR ERVL -1 556 408 1009 264 28 12 chr2 14562759 14563013 -238693570 - MIR SINE MIR -1 261 4 180 74 0 0 chr2 14563215 14563242 -238693341 + L2 LINE L2 3287 3313 0 560 259 52 60 chr2 14563298 14563530 -238693053 + LTR33 LTR ERVL 1 230 -291 456 235 0 26 chr2 14563639 14563754 -238692829 + LTR33 LTR ERVL 385 496 -25 31 0 0 0 chr2 14563913 14563944 -238692639 + AT_rich Low_complexity Low_complexity 1 31 0 566 292 84 100 chr2 14563964 14564857 -238691726 - L1ME LINE L1 -1605 4541 3660 407 284 140 54 chr2 14566916 14567381 -238689202 - MLT1H LTR MaLR -15 534 30 317 372 100 46 chr2 14567774 14568013 -238688570 + L2 LINE L2 3021 3272 0 309 265 25 86 chr2 14568184 14568346 -238688237 + MIR3 SINE MIR 51 202 -6 501 314 47 21 chr2 14570154 14570345 -238686238 + MIR3 SINE MIR 1 196 -12 516 263 137 21 chr2 14570392 14570582 -238686001 - MIR SINE MIR -23 239 28 273 299 95 8 chr2 14570675 14570805 -238685778 - MIR3 SINE MIR -44 164 21 320 287 77 21 chr2 14571162 14571305 -238685278 - MIR3 SINE MIR -9 199 49 2201 125 3 0 chr2 14571326 14571637 -238684946 - AluSx SINE Alu 0 312 1 278 221 79 142 chr2 14571710 14571762 -238684821 - MLT1I LTR MaLR -141 268 214 2222 181 37 22 chr2 14571762 14572220 -238684363 + MLT1C LTR MaLR 3 467 0 278 221 79 142 chr2 14572220 14572357 -238684226 - MLT1I LTR MaLR -195 214 91 21 0 0 0 chr2 14572729 14572750 -238683833 + AT_rich Low_complexity Low_complexity 1 21 0 600 162 18 9 chr2 14573110 14573221 -238683362 + MER81 DNA DNA 1 112 -2 371 252 37 0 chr2 14573322 14573429 -238683154 + MER81 DNA DNA 1 111 -3 569 216 40 8 chr2 14573443 14573568 -238683015 - MIR SINE MIR -63 145 17 229 387 0 9 chr2 14574034 14574145 -238682438 + MIR SINE MIR 33 142 -66 231 331 39 45 chr2 14574254 14574408 -238682175 + MIR SINE MIR 26 178 -84 195 42 0 0 chr2 14574615 14574639 -238681944 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 30 0 0 0 chr2 14574695 14574725 -238681858 + AT_rich Low_complexity Low_complexity 1 30 0 455 274 77 69 chr2 14574761 14575035 -238681548 - MLT1J LTR MaLR 0 511 236 265 254 30 0 chr2 14575359 14575426 -238681157 - MLT1L LTR MaLR -546 69 1 22 35 0 0 chr2 14575707 14575736 -238680847 + AT_rich Low_complexity Low_complexity 1 29 0 21 89 0 0 chr2 14575890 14575946 -238680637 + AT_rich Low_complexity Low_complexity 1 56 0 248 240 150 10 chr2 14577422 14577522 -238679061 - MIR SINE MIR -73 189 76 1466 66 0 0 chr2 14577574 14577788 -238678795 + L1PA8 LINE L1 5966 6179 0 1558 333 107 17 chr2 14578666 14579631 -238676952 + L2 LINE L2 417 1468 -1846 2192 162 38 23 chr2 14579820 14579859 -238676724 - MLT2A2 LTR ERVL 0 554 517 495 0 0 0 chr2 14579859 14579914 -238676669 + (TAGA)n Simple_repeat Simple_repeat 3 57 0 2192 162 38 23 chr2 14579914 14580409 -238676174 - MLT2A2 LTR ERVL -37 517 1 2187 269 119 61 chr2 14580410 14581603 -238674980 + L2 LINE L2 1527 2788 -526 1919 145 0 0 chr2 14582120 14582450 -238674133 + AluSx SINE Alu 1 330 0 242 318 16 0 chr2 14582589 14582652 -238673931 + L2 LINE L2 3123 3186 -86 2367 227 39 6 chr2 14583652 14584168 -238672415 - MER87 LTR ERV1 -6 535 3 381 22 0 0 chr2 14584239 14584285 -238672298 + (CA)n Simple_repeat Simple_repeat 2 47 0 1149 315 95 34 chr2 14584526 14585176 -238671407 - L1MEc LINE L1 -5676 720 31 209 361 12 0 chr2 14585798 14585881 -238670702 - MIR SINE MIR -74 134 51 351 340 52 36 chr2 14586367 14586561 -238670022 + L3 LINE CR1 1247 1443 -134 6163 29 4 0 chr2 14586757 14587489 -238669094 + L1PA4 LINE L1 5417 6151 -4 22 0 0 0 chr2 14587709 14587731 -238668852 + AT_rich Low_complexity Low_complexity 1 22 0 7260 69 159 28 chr2 14588491 14589610 -238666973 - MER11A LTR ERVK 0 1266 1 185 377 149 11 chr2 14591035 14591210 -238665373 + L2 LINE L2 2958 3156 -116 193 200 36 73 chr2 14591266 14591321 -238665262 - L2 LINE L2 -1 3271 3219 * 339 339 35 9 chr2 14591312 14591427 -238665156 + L2 LINE L2 3151 3268 -4 309 51 0 0 chr2 14592001 14592040 -238664543 + (TG)n Simple_repeat Simple_repeat 2 40 0 21 57 0 0 chr2 14592170 14592205 -238664378 + AT_rich Low_complexity Low_complexity 1 35 0 308 44 0 0 chr2 14592698 14592743 -238663840 + L1PA3 LINE L1 6111 6155 0 1886 198 83 30 chr2 14593445 14593905 -238662678 - MLT1D LTR MaLR 0 505 22 530 298 192 0 chr2 14593973 14594181 -238662402 - MIR SINE MIR -2 260 13 309 26 0 0 chr2 14595065 14595103 -238661480 + (CA)n Simple_repeat Simple_repeat 2 39 0 231 239 194 0 chr2 14595273 14595340 -238661243 + MIR SINE MIR 36 115 -93 232 333 21 43 chr2 14595464 14595557 -238661026 + L2 LINE L2 3181 3271 -1 2181 169 48 0 chr2 14596193 14596571 -238660012 + MSTD LTR MaLR 1 396 0 521 263 50 53 chr2 14596923 14597185 -238659398 + MIR SINE MIR 2 262 0 22 0 0 0 chr2 14597319 14597341 -238659242 + AT_rich Low_complexity Low_complexity 1 22 0 197 350 150 0 chr2 14597971 14598051 -238658532 - L2 LINE L2 -47 3225 3134 960 209 121 85 chr2 14598140 14598527 -238658056 - MER57A LTR ERV1 0 403 3 344 286 157 31 chr2 14598603 14598858 -238657725 - L2 LINE L2 -337 2977 2691 409 325 32 0 chr2 14599193 14599347 -238657236 + MIR SINE MIR 101 259 -3 609 329 76 4 chr2 14599410 14599647 -238656936 - MIR SINE MIR -5 257 4 216 227 76 15 chr2 14599647 14599712 -238656871 + MIR SINE MIR 63 131 -77 326 296 56 24 chr2 14599712 14599837 -238656746 + MLT1J2 LTR MaLR 32 160 -290 1149 284 30 62 chr2 14600016 14600618 -238655965 + HsTC2a DNA Tc2 1 583 -161 1195 304 61 39 chr2 14600618 14601262 -238655321 + L1ME LINE L1 5 662 -5408 193 288 17 17 chr2 14601303 14601362 -238655221 + MIR SINE MIR 76 134 -128 25 0 0 0 chr2 14601366 14601391 -238655192 + AT_rich Low_complexity Low_complexity 1 25 0 225 310 69 88 chr2 14602004 14602220 -238654363 + MIR SINE MIR 1 212 -50 204 125 0 0 chr2 14602635 14602667 -238653916 + (T)n Simple_repeat Simple_repeat 1 32 0 1621 213 89 9 chr2 14603283 14603711 -238652872 - MLT1C LTR MaLR 0 467 6 403 248 88 22 chr2 14604480 14604617 -238651966 - MIR SINE MIR 0 262 117 290 217 0 17 chr2 14604805 14604865 -238651718 + MIR SINE MIR 95 153 -109 342 347 60 40 chr2 14605422 14605572 -238651011 - MIR3 SINE MIR -11 197 45 820 198 89 10 chr2 14605608 14605810 -238650773 - MER20 DNA MER1_type 0 219 2 394 301 38 107 chr2 14606105 14606394 -238650189 + L2 LINE L2 2996 3264 -8 2222 161 46 10 chr2 14606435 14606978 -238649605 - L1M2 LINE L1 -743 5403 4971 4025 125 37 97 chr2 14606995 14607114 -238649469 + L1MA6 LINE L1 5536 5661 -639 2457 86 0 6 chr2 14607114 14607427 -238649156 + AluY SINE Alu 1 311 0 4025 125 37 97 chr2 14607427 14607643 -238648940 + L1MA6 LINE L1 5661 5888 -412 291 143 20 0 chr2 14607643 14607727 -238648856 - AluS SINE Alu 0 316 232 4025 125 37 97 chr2 14607727 14608155 -238648428 + L1MA6 LINE L1 5888 6300 0 1239 145 208 25 chr2 14608683 14608945 -238647638 + AluSx SINE Alu 1 306 0 207 386 90 7 chr2 14611964 14612109 -238644474 - L2 LINE L2 -333 2980 2824 248 204 56 74 chr2 14612473 14612581 -238644002 + MLT1K LTR MaLR 181 286 -302 1154 221 28 0 chr2 14612966 14613183 -238643400 - MER58A DNA MER1_type 0 224 2 371 295 48 42 chr2 14613780 14613946 -238642637 + MIR SINE MIR 68 234 -28 225 298 116 25 chr2 14614380 14614501 -238642082 + MIR3 SINE MIR 38 169 -39 507 284 96 23 chr2 14614817 14615035 -238641548 + MIR SINE MIR 25 258 -4 193 314 29 29 chr2 14615527 14615597 -238640986 - L2 LINE L2 -3 3269 3200 2031 124 56 25 chr2 14615790 14616145 -238640438 + THE1C LTR MaLR 10 375 0 284 377 27 0 chr2 14616984 14617130 -238639453 + L3 LINE CR1 1236 1385 -192 213 154 0 0 chr2 14617437 14617476 -238639107 + CT-rich Low_complexity Low_complexity 2 40 0 339 113 0 0 chr2 14617476 14617529 -238639054 + (CA)n Simple_repeat Simple_repeat 1 53 0 2049 131 0 13 chr2 14617692 14617997 -238638586 + AluSx SINE Alu 1 301 -11 566 208 22 38 chr2 14618388 14618573 -238638010 + LTR45 LTR ERV1 304 524 -1 253 296 241 25 chr2 14618693 14618896 -238637687 - MIR SINE MIR -14 248 2 24 32 0 0 chr2 14619376 14619407 -238637176 + AT_rich Low_complexity Low_complexity 1 31 0 201 355 120 22 chr2 14619677 14619860 -238636723 + MIR SINE MIR 49 249 -13 720 260 57 16 chr2 14619978 14620170 -238636413 - MIR SINE MIR -44 218 19 1031 222 23 36 chr2 14620197 14620418 -238636165 + MER20 DNA MER1_type 1 218 -1 312 336 43 50 chr2 14620913 14621053 -238635530 - MIR3 SINE MIR -49 159 21 489 266 72 22 chr2 14622368 14622507 -238634076 - MIR3 SINE MIR -49 159 14 404 48 63 48 chr2 14622826 14622889 -238633694 - L1PA4 LINE L1 -3 6152 6089 1977 199 33 20 chr2 14623482 14623873 -238632710 - MSTD LTR MaLR 0 396 1 333 346 31 15 chr2 14623964 14624094 -238632489 + MIR SINE MIR 20 151 -111 2018 174 83 25 chr2 14625196 14625604 -238630979 + MSTB1 LTR MaLR 1 432 0 232 250 48 77 chr2 14625968 14626072 -238630511 - L2 LINE L2 0 3313 3213 315 347 8 0 chr2 14626676 14626797 -238629786 + LTR16B LTR ERVL 4 125 -339 455 171 184 32 chr2 14626834 14626992 -238629591 + MER96B DNA MER1_type? 49 230 -187 734 293 81 3 chr2 14626997 14627294 -238629289 + LTR16B LTR ERVL 145 464 0 213 39 0 0 chr2 14627520 14627546 -238629037 + (TATG)n Simple_repeat Simple_repeat 2 27 0 485 315 91 14 chr2 14630704 14630923 -238625660 - MIR SINE MIR -7 255 20 2196 170 29 10 chr2 14631044 14631427 -238625156 - MLT1B LTR MaLR 0 390 1 415 251 56 127 chr2 14632102 14632480 -238624103 + MLT1J LTR MaLR 128 478 -33 2032 116 41 0 chr2 14632649 14632943 -238623640 + AluSc SINE Alu 1 306 -3 449 274 6 45 chr2 14633215 14633372 -238623211 - L2 LINE L2 -1 3312 3162 210 261 0 0 chr2 14633375 14633421 -238623162 + (CATATA)n Simple_repeat Simple_repeat 2 47 0 201 211 128 83 chr2 14633478 14633587 -238622996 + MIR3 SINE MIR 92 205 -3 279 0 0 0 chr2 14633917 14633948 -238622635 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 1272 241 65 6 chr2 14635883 14636235 -238620348 + MLT1C LTR MaLR 95 467 0 440 281 50 7 chr2 14637321 14637460 -238619123 + MIR SINE MIR 116 260 -2 197 176 0 20 chr2 14637478 14637529 -238619054 + GA-rich Low_complexity Low_complexity 1 50 0 2117 204 30 42 chr2 14637802 14638308 -238618275 + MLT1D LTR MaLR 3 502 -3 608 270 131 18 chr2 14639663 14639885 -238616698 + MIR SINE MIR 4 250 -12 279 285 114 32 chr2 14639887 14640010 -238616573 + MIR SINE MIR 34 140 -68 222 276 145 0 chr2 14641243 14641319 -238615264 - L2 LINE L2 -38 3234 3148 231 342 25 8 chr2 14641466 14641586 -238614997 - MLT1L LTR MaLR -2 613 492 477 0 0 0 chr2 14641820 14641873 -238614710 + (TGGA)n Simple_repeat Simple_repeat 4 56 0 246 284 168 0 chr2 14642791 14642886 -238613697 - MIR3 SINE MIR -12 196 86 391 293 5 7 chr2 14643369 14644058 -238612525 + (CA)n Simple_repeat Simple_repeat 1 687 0 540 322 0 0 chr2 14644109 14644624 -238611959 + (CA)n Simple_repeat Simple_repeat 1 515 0 530 282 0 6 chr2 14644649 14644830 -238611753 + (CA)n Simple_repeat Simple_repeat 1 180 0 435 247 121 24 chr2 14645301 14645467 -238611116 - MIR SINE MIR -13 249 68 1134 8 0 0 chr2 14645524 14645645 -238610938 - L1PA3 LINE L1 0 6155 6035 4451 16 0 0 chr2 14645645 14646140 -238610443 + L1PA3 LINE L1 5474 5968 -187 233 281 0 18 chr2 14646157 14646214 -238610369 - L2 LINE L2 -230 3042 2987 220 338 14 29 chr2 14646655 14646794 -238609789 + L2 LINE L2 2599 2735 -579 369 310 44 9 chr2 14647845 14647958 -238608625 - L2 LINE L2 -17 3296 3180 203 225 225 50 chr2 14648358 14648397 -238608186 - MIR SINE MIR -109 153 122 261 0 0 0 chr2 14648397 14648426 -238608157 + (GA)n Simple_repeat Simple_repeat 2 30 0 203 225 225 50 chr2 14648426 14648466 -238608117 - MIR SINE MIR -140 122 60 184 303 78 49 chr2 14648745 14648887 -238607696 + MIR SINE MIR 111 256 -6 214 290 43 14 chr2 14648911 14648980 -238607603 - MIR SINE MIR -68 140 70 311 299 0 0 chr2 14649370 14649437 -238607146 - L2 LINE L2 -16 3256 3190 180 384 60 20 chr2 14649440 14649591 -238606992 + L2 LINE L2 3092 3248 -24 439 280 60 33 chr2 14649850 14650032 -238606551 - MIR SINE MIR -29 233 47 654 243 161 23 chr2 14650236 14650454 -238606129 + MIR SINE MIR 4 251 -11 437 308 48 7 chr2 14650463 14650609 -238605974 - MIR SINE MIR -26 236 85 983 235 145 0 chr2 14651327 14651616 -238604967 - L1ME1 LINE L1 -1 6165 5835 208 300 138 23 chr2 14651618 14651748 -238604835 - MER5B DNA MER1_type 0 178 34 6522 158 38 0 chr2 14651748 14653000 -238603583 + L1MC1 LINE L1 5043 6331 -2 503 289 56 6 chr2 14653052 14653253 -238603330 - MIR SINE MIR -46 216 8 1426 134 0 18 chr2 14653840 14654063 -238602520 - L1PB1 LINE L1 -191 5960 5742 1689 205 51 56 chr2 14654529 14654997 -238601586 - MLT1C LTR MaLR 0 467 2 363 291 27 9 chr2 14655883 14655993 -238600590 + L2 LINE L2 2677 2788 -526 438 200 50 0 chr2 14656214 14656294 -238600289 + MER96 DNA MER1_type? 1 84 -91 296 220 0 0 chr2 14656289 14656348 -238600235 - MER96 DNA MER1_type? -114 61 3 * 247 327 27 18 chr2 14656628 14656738 -238599845 - L2 LINE L2 -227 3045 2935 504 123 37 18 chr2 14657696 14657859 -238598724 + (TA)n Simple_repeat Simple_repeat 1 166 0 24 53 0 0 chr2 14657867 14657905 -238598678 + AT_rich Low_complexity Low_complexity 1 38 0 243 157 52 179 chr2 14657965 14658099 -238598484 - MER112 DNA MER1_type -7 253 137 288 0 0 0 chr2 14658129 14658161 -238598422 + (TG)n Simple_repeat Simple_repeat 1 32 0 343 311 92 32 chr2 14658250 14658436 -238598147 + MIR SINE MIR 2 197 -63 529 264 67 11 chr2 14658438 14658616 -238597967 + MIR SINE MIR 9 196 -66 210 233 128 83 chr2 14659316 14659449 -238597134 - MER5A DNA MER1_type -6 183 45 191 230 44 115 chr2 14659493 14659606 -238596977 + MIR SINE MIR 95 199 -63 442 216 193 0 chr2 14660695 14660847 -238595736 - MER5A DNA MER1_type 0 189 4 450 253 53 47 chr2 14660868 14661038 -238595545 + MER5B DNA MER1_type 1 171 -7 340 291 127 6 chr2 14661585 14661750 -238594833 + MIR3 SINE MIR 3 187 -21 414 245 41 24 chr2 14661901 14662104 -238594479 + MLT1J LTR MaLR 11 282 -331 2177 124 0 0 chr2 14662452 14662758 -238593825 + AluSx SINE Alu 1 306 -6 262 286 190 47 chr2 14664598 14664940 -238591643 + L2 LINE L2 2586 2976 -338 287 294 116 20 chr2 14665063 14665209 -238591374 + MIR SINE MIR 47 206 -56 1119 111 28 17 chr2 14665346 14665526 -238591057 - L1PA16 LINE L1 -5 6161 5980 263 378 25 34 chr2 14666073 14666192 -238590391 + L2 LINE L2 3150 3267 -5 180 374 55 22 chr2 14666298 14666389 -238590194 - MIR SINE MIR -133 129 36 265 330 9 0 chr2 14669143 14669258 -238587325 + (CATATA)n Simple_repeat Simple_repeat 2 117 0 27 0 0 0 chr2 14670887 14670914 -238585669 + AT_rich Low_complexity Low_complexity 1 27 0 210 313 67 15 chr2 14670964 14671098 -238585485 - L2 LINE L2 -1277 2037 1897 422 299 92 33 chr2 14671221 14671492 -238585091 - MLT1I LTR MaLR 0 409 123 194 356 114 23 chr2 14671561 14671693 -238584890 + L2 LINE L2 3117 3260 -12 209 294 174 22 chr2 14671994 14672086 -238584497 - MIR3 SINE MIR -8 200 95 21 0 0 0 chr2 14672318 14672339 -238584244 + AT_rich Low_complexity Low_complexity 1 21 0 406 290 26 52 chr2 14672661 14672816 -238583767 - MIR3 SINE MIR -49 159 9 254 306 82 0 chr2 14673390 14673488 -238583095 + MIR SINE MIR 47 152 -110 23 0 0 0 chr2 14674258 14674281 -238582302 + AT_rich Low_complexity Low_complexity 1 23 0 2181 112 0 0 chr2 14674281 14674566 -238582017 - AluSx SINE Alu -27 285 1 22 35 0 0 chr2 14674840 14674869 -238581714 + AT_rich Low_complexity Low_complexity 1 29 0 215 179 36 54 chr2 14674943 14674999 -238581584 - MIR3 SINE MIR -48 160 106 618 264 75 38 chr2 14675073 14675285 -238581298 - MIR SINE MIR -14 248 29 891 279 154 13 chr2 14676430 14677067 -238579516 + L2 LINE L2 2574 3313 0 236 278 100 0 chr2 14677300 14677390 -238579193 + MIR SINE MIR 76 174 -88 207 271 0 17 chr2 14678109 14678168 -238578415 + GA-rich Low_complexity Low_complexity 3 60 0 5576 108 2 1 chr2 14679467 14680319 -238576264 + L1PA13 LINE L1 5310 6162 -1 3132 31 5 8 chr2 14680517 14680904 -238575679 - L1PA3 LINE L1 -5 6150 5765 41986 38 2 3 chr2 14681004 14686943 -238569640 - L1PA3 LINE L1 -218 5937 9 294 326 152 30 chr2 14687222 14687354 -238569229 + L2 LINE L2 3125 3272 0 399 272 253 20 chr2 14687458 14687660 -238568923 - MIR SINE MIR -11 251 3 401 277 35 21 chr2 14687661 14687802 -238568781 + MIR3 SINE MIR 61 203 -5 2089 106 0 88 chr2 14688115 14688309 -238568274 - AluSp SINE Alu -11 302 147 2375 100 3 0 chr2 14688309 14688620 -238567963 - AluSp SINE Alu -1 312 1 2089 106 0 88 chr2 14688620 14688756 -238567827 - AluSp SINE Alu -166 147 1 1977 131 0 7 chr2 14688987 14689310 -238567273 + AluSg SINE Alu 1 321 0 376 230 0 0 chr2 14689359 14689433 -238567150 + L1MDb LINE L1 481 554 -5855 761 206 5 42 chr2 14689483 14689672 -238566911 + L1MDb LINE L1 653 834 -5575 1731 229 32 8 chr2 14689678 14690080 -238566503 - MER47B DNA MER2_type 0 418 7 1020 148 0 51 chr2 14690119 14690335 -238566248 + L1MDb LINE L1 871 1075 -5334 1067 188 54 122 chr2 14690335 14690753 -238565830 + MLT1B LTR MaLR 1 457 0 1892 234 95 33 chr2 14690753 14691581 -238565002 + L1MDb LINE L1 1048 1927 -4479 310 164 327 9 chr2 14691658 14691768 -238564815 + MER4C LTR ERV1 302 446 -19 24 32 0 0 chr2 14693642 14693673 -238562910 + AT_rich Low_complexity Low_complexity 1 31 0 2962 221 66 48 chr2 14693677 14694727 -238561856 - L1ME1 LINE L1 -5 6230 5128 685 198 8 143 chr2 14694727 14694979 -238561604 - MER20 DNA MER1_type -1 218 1 2962 221 66 48 chr2 14694979 14695668 -238560915 - L1ME1 LINE L1 -1107 5128 4453 914 238 135 76 chr2 14695668 14695946 -238560637 + LTR28 LTR ERV1 1 261 -1494 1616 58 4 86 chr2 14695946 14696203 -238560380 + AluY SINE Alu 73 308 -3 914 238 135 76 chr2 14696203 14696944 -238559639 + LTR28 LTR ERV1 261 1742 -13 4557 265 52 25 chr2 14696960 14699262 -238557321 - L1ME1 LINE L1 -1767 4448 2091 1846 121 91 26 chr2 14699262 14699601 -238556982 + THE1B LTR MaLR 2 362 -2 4557 265 52 25 chr2 14699601 14700140 -238556443 - L1ME1 LINE L1 -4124 2091 1568 219 88 0 0 chr2 14700293 14700327 -238556256 + (GTTTG)n Simple_repeat Simple_repeat 5 38 0 1057 227 122 29 chr2 14700330 14700886 -238555697 - L1ME1 LINE L1 -5096 1300 693 * 5896 25 0 1 chr2 14700881 14701625 -238554958 - L1P LINE L1 -770 5376 4634 4471 14 4 0 chr2 14701625 14702133 -238554450 + L1PA2 LINE L1 5642 6155 0 1698 266 65 21 chr2 14702145 14702706 -238553877 - L1ME1 LINE L1 -5693 703 110 2207 117 0 7 chr2 14702706 14703030 -238553553 - AluSx SINE Alu 0 312 1 1698 266 65 21 chr2 14703030 14703095 -238553488 - L1ME1 LINE L1 -6286 110 49 2824 220 27 10 chr2 14703128 14703754 -238552829 - MER82 DNA MER2_type -15 638 2 300 310 54 16 chr2 14704088 14704217 -238552366 - L2 LINE L2 -1 3271 3138 328 304 30 129 chr2 14704377 14704742 -238551841 - L2 LINE L2 -411 2903 2575 214 354 97 65 chr2 14704771 14705079 -238551504 + L2 LINE L2 2869 3186 -86 999 140 43 38 chr2 14705128 14705314 -238551269 - MER5A DNA MER1_type 0 189 3 207 255 0 0 chr2 14705396 14705443 -238551140 + (TG)n Simple_repeat Simple_repeat 2 48 0 381 22 0 0 chr2 14706521 14706567 -238550016 + (TG)n Simple_repeat Simple_repeat 2 47 0 198 338 189 25 chr2 14706774 14706975 -238549608 + MIR SINE MIR 9 242 -20 180 77 0 0 chr2 14706983 14707009 -238549574 + (TC)n Simple_repeat Simple_repeat 1 26 0 342 227 91 65 chr2 14707212 14707366 -238549217 - MIR SINE MIR -71 191 34 2077 111 88 20 chr2 14707422 14707763 -238548820 + THE1B LTR MaLR 1 364 0 9778 112 7 11 chr2 14707763 14709240 -238547343 + THE1B-int LTR MaLR 1 1483 -97 435 119 0 24 chr2 14709340 14709424 -238547159 + THE1B-int LTR MaLR 1499 1580 0 2385 106 66 23 chr2 14709424 14709773 -238546810 + THE1B LTR MaLR 1 364 0 378 285 124 27 chr2 14709777 14709963 -238546620 + MIR SINE MIR 46 249 -13 1807 177 0 7 chr2 14710296 14710595 -238545988 + AluJo SINE Alu 1 297 -15 822 253 109 30 chr2 14710621 14710823 -238545760 + MER20 DNA MER1_type 1 218 -1 186 333 8 34 chr2 14710848 14710965 -238545618 - L2 LINE L2 -649 2665 2552 425 310 58 35 chr2 14711265 14711436 -238545147 - MLT1G1 LTR MaLR -206 389 215 2279 127 116 10 chr2 14711959 14712346 -238544237 + MSTA LTR MaLR 1 428 0 8789 149 26 52 chr2 14712348 14713963 -238542620 + MSTA-int LTR MaLR 3 1575 -5 2120 176 99 8 chr2 14713965 14714357 -238542226 + MSTA LTR MaLR 1 428 0 551 326 126 39 chr2 14714719 14715329 -238541254 + L2 LINE L2 2137 2799 -515 2349 150 12 0 chr2 14715329 14715662 -238540921 + MER1B DNA MER1_type 1 337 0 241 376 50 21 chr2 14716586 14716727 -238539856 + L2 LINE L2 3123 3267 -5 337 378 11 32 chr2 14716972 14717160 -238539423 + MIR3 SINE MIR 18 201 -7 375 322 72 5 chr2 14717535 14717720 -238538863 - MIR SINE MIR -56 206 6 747 284 33 69 chr2 14718038 14718401 -238538182 + L2 LINE L2 2918 3267 -5 6452 102 4 5 chr2 14718833 14719841 -238536742 + L1MA1 LINE L1 5146 6152 -150 2390 65 16 0 chr2 14720085 14720391 -238536192 - AluY SINE Alu 0 311 1 2057 110 0 69 chr2 14720897 14721216 -238535367 + AluSg SINE Alu 1 297 -13 199 235 47 82 chr2 14721724 14721809 -238534774 - MIR3 SINE MIR -43 165 84 227 324 42 0 chr2 14722136 14722207 -238534376 - MIR SINE MIR -188 74 1 337 324 14 40 chr2 14722573 14722721 -238533862 - MIR3 SINE MIR -23 185 42 286 328 41 33 chr2 14723280 14723402 -238533181 - MIR SINE MIR -116 146 24 428 262 200 0 chr2 14723691 14723836 -238532747 + MER5A DNA MER1_type 6 179 -10 260 374 58 66 chr2 14724737 14725114 -238531469 - L2 LINE L2 0 3272 2899 421 156 2 39 chr2 14725198 14725293 -238531290 + MLT1F1 LTR MaLR 465 567 0 * 503 185 44 67 chr2 14725293 14725427 -238531156 + MER69 DNA AcHobo 15 145 -2381 456 160 11 0 chr2 14725426 14725520 -238531063 + MER69 DNA AcHobo 2336 2430 -96 * 483 185 0 0 chr2 14726621 14726702 -238529881 - L1MB1 LINE L1 -609 5725 5645 2393 166 48 0 chr2 14726702 14727118 -238529465 + L1MB1 LINE L1 5733 6168 0 847 308 71 33 chr2 14727221 14728019 -238528564 - L2 LINE L2 0 3313 2438 246 333 13 0 chr2 14729014 14729092 -238527491 + MER5B DNA MER1_type 3 81 -97 612 271 117 88 chr2 14729093 14729650 -238526933 - MLT1L LTR MaLR -2 613 41 223 207 72 176 chr2 14729861 14729992 -238526591 - MER91A DNA MER1_type -22 174 68 881 233 111 0 chr2 14729992 14730181 -238526402 + MER63A DNA MER1_type 1 210 0 223 207 72 176 chr2 14730181 14730242 -238526341 - MER91A DNA MER1_type -128 68 2 21 0 0 0 chr2 14730516 14730537 -238526046 + AT_rich Low_complexity Low_complexity 1 21 0 483 400 4 16 chr2 14730803 14731058 -238525525 + MIR SINE MIR 3 254 -8 259 182 26 26 chr2 14731430 14731507 -238525076 + (TTTG)n Simple_repeat Simple_repeat 2 78 0 497 197 76 4 chr2 14731917 14732079 -238524504 - MER20 DNA MER1_type -1 218 1 289 314 76 0 chr2 14732085 14732190 -238524393 - MIR SINE MIR -84 178 66 295 229 144 78 chr2 14732545 14732698 -238523885 + MIR SINE MIR 87 249 -13 462 298 62 31 chr2 14732854 14733015 -238523568 + MIR3 SINE MIR 19 184 -24 13947 23 9 1 chr2 14734350 14735981 -238520602 + L1PA2 LINE L1 3402 5044 -1102 4469 13 0 0 chr2 14736081 14736555 -238520028 + L1PA2 LINE L1 5675 6148 -7 1018 190 34 23 chr2 14736565 14736828 -238519755 + L1M1 LINE L1 2897 3162 -2984 * 12249 179 32 60 chr2 14736823 14738546 -238518037 + L1MA3 LINE L1 10 1638 -5927 222 37 0 0 chr2 14738546 14738573 -238518010 + (GA)n Simple_repeat Simple_repeat 2 28 0 12249 179 32 60 chr2 14738573 14739450 -238517133 + L1MA3 LINE L1 1638 2538 -5027 6841 142 22 12 chr2 14739440 14741574 -238515009 + L1MA3 LINE L1 5575 7724 0 * 5756 156 34 25 chr2 14741558 14742826 -238513757 + L1M1 LINE L1 4253 5540 -743 * 727 217 12 37 chr2 14742934 14743094 -238513489 + MIR SINE MIR 42 198 -64 2135 185 6 0 chr2 14743094 14743440 -238513143 - MER7A DNA MER2_type 0 346 1 727 217 12 37 chr2 14743440 14743478 -238513105 + MIR SINE MIR 198 235 -27 228 67 0 0 chr2 14743893 14743923 -238512660 + (A)n Simple_repeat Simple_repeat 1 30 0 253 160 40 0 chr2 14744314 14744364 -238512219 - L2 LINE L2 0 3313 3262 398 384 33 33 chr2 14744581 14744977 -238511606 - L2 LINE L2 -366 2948 2553 2512 198 42 14 chr2 14745021 14745099 -238511484 - LTR53 LTR ERVL 0 519 445 2261 108 68 34 chr2 14745099 14745451 -238511132 - THE1B LTR MaLR 0 364 1 2512 198 42 14 chr2 14745451 14745871 -238510712 - LTR53 LTR ERVL -74 445 7 326 162 15 29 chr2 14746165 14746233 -238510350 + MLT1H LTR MaLR 483 549 0 3438 184 4 25 chr2 14746454 14747139 -238509444 + L1MA4 LINE L1 5629 6299 -1 1994 113 73 0 chr2 14748280 14748554 -238508029 - AluSg SINE Alu -16 294 1 427 303 45 86 chr2 14748601 14748845 -238507738 + MIR SINE MIR 23 256 -6 590 290 105 13 chr2 14748860 14749098 -238507485 - MLT1J2 LTR MaLR -2 448 189 240 163 75 88 chr2 14749317 14749358 -238507225 - LTR40b LTR ERVL -311 151 110 1484 196 53 94 chr2 14749358 14749827 -238506756 - LTR7 LTR ERV1 0 450 1 240 163 75 88 chr2 14749827 14749865 -238506718 - LTR40b LTR ERVL -352 110 73 265 304 38 87 chr2 14749882 14750066 -238506517 - MIR3 SINE MIR -12 196 22 2324 109 0 13 chr2 14750174 14750487 -238506096 + AluSg SINE Alu 1 309 -1 292 275 50 55 chr2 14750599 14750781 -238505802 + MIR SINE MIR 53 233 -29 855 278 25 16 chr2 14750795 14751040 -238505543 + MIR SINE MIR 16 262 0 273 256 0 45 chr2 14751246 14751328 -238505255 + MIR SINE MIR 73 150 -58 251 284 257 0 chr2 14751966 14752114 -238504469 - MER5A DNA MER1_type 0 189 4 4409 168 37 41 chr2 14752469 14752758 -238503825 - L1MB3 LINE L1 -2 6181 5893 1935 169 11 101 chr2 14752758 14753213 -238503370 + MLT2D LTR ERVL 1 414 0 4409 168 37 41 chr2 14753213 14753832 -238502751 - L1MB3 LINE L1 -290 5893 5276 226 345 86 7 chr2 14755021 14755160 -238501423 - MER5A DNA MER1_type -39 150 1 2220 96 3 0 chr2 14755279 14755582 -238501001 - AluSx SINE Alu 0 304 1 2002 153 172 3 chr2 14755719 14756085 -238500498 + MSTA LTR MaLR 1 428 0 208 270 157 82 chr2 14758010 14758042 -238498541 - MIR SINE MIR -72 190 162 186 43 0 0 chr2 14758042 14758065 -238498518 + (TTA)n Simple_repeat Simple_repeat 2 24 0 208 270 157 82 chr2 14758065 14758191 -238498392 - MIR SINE MIR -100 162 20 192 382 44 22 chr2 14758752 14758888 -238497695 - MIR3 SINE MIR -63 145 7 377 346 47 16 chr2 14760273 14760474 -238496109 - MIR SINE MIR -14 248 4 559 312 40 24 chr2 14761484 14761731 -238494852 + LTR16C LTR ERVL 146 396 -95 2596 270 42 54 chr2 14762182 14763470 -238493113 + L1MEc LINE L1 18 1289 -5107 1328 222 122 57 chr2 14763584 14764654 -238491929 + L1MEc LINE L1 1623 2761 -3454 369 121 0 30 chr2 14764666 14764732 -238491851 - AluSg/x SINE Alu -77 223 160 768 143 29 58 chr2 14764732 14764898 -238491685 - LTR12 LTR ERV1 -108 606 379 4140 121 56 44 chr2 14764899 14765575 -238491008 - LTR12 LTR ERV1 -4 684 1 293 171 0 0 chr2 14765577 14765618 -238490965 - AluSg/x SINE Alu -128 174 134 807 170 0 15 chr2 14765618 14765753 -238490830 - AluJo/FLAM SINE Alu -169 133 1 1965 236 163 70 chr2 14765753 14766581 -238490002 + L1MEc LINE L1 2745 3495 -2720 2370 69 0 50 chr2 14766581 14766899 -238489684 + AluY SINE Alu 1 302 -9 1965 236 163 70 chr2 14766899 14767576 -238489007 + L1MEc LINE L1 3495 4408 -1807 2097 113 10 3 chr2 14767576 14767868 -238488715 + AluSg SINE Alu 1 294 -16 1965 236 163 70 chr2 14767868 14767953 -238488630 + L1MEc LINE L1 4408 4484 -1731 1812 279 64 61 chr2 14767973 14768797 -238487786 - HERV16 LTR ERVL -2318 2678 1852 2832 325 98 14 chr2 14769014 14770419 -238486164 - HERV16 LTR ERVL -3471 1525 2 819 331 43 12 chr2 14770419 14770818 -238485765 - LTR16A LTR ERVL -18 432 22 502 128 73 64 chr2 14770859 14770968 -238485615 - L1MC1 LINE L1 0 6333 6224 3408 151 13 4 chr2 14771076 14771631 -238484952 - L1MC1 LINE L1 -100 6233 5674 477 293 100 71 chr2 14772936 14773405 -238483178 + HAL1b LINE L1 14 505 -843 2346 180 6 53 chr2 14773405 14773877 -238482706 + L1PA16 LINE L1 5716 6165 -1 477 293 100 71 chr2 14773877 14773995 -238482588 + HAL1b LINE L1 505 618 -730 1034 205 83 5 chr2 14773996 14774201 -238482382 + MER58A DNA MER1_type 3 223 -1 200 304 0 0 chr2 14775917 14775963 -238480620 + MIR SINE MIR 31 76 -132 1457 170 38 42 chr2 14776051 14776353 -238480230 + AluJb SINE Alu 19 319 0 1998 297 123 27 chr2 14776923 14778395 -238478188 - L2 LINE L2 0 3313 1716 187 339 145 38 chr2 14778532 14778924 -238477659 + L2 LINE L2 2804 3237 -35 2198 112 14 0 chr2 14779466 14779760 -238476823 + AluSx SINE Alu 1 298 -14 2181 116 0 0 chr2 14780549 14780857 -238475726 - AluSx SINE Alu 0 308 1 462 214 22 0 chr2 14781061 14781150 -238475433 - ORSL DNA AcHobo -184 91 1 2131 116 0 23 chr2 14782962 14783290 -238473293 + AluSq SINE Alu 1 313 0 310 310 58 39 chr2 14783955 14784110 -238472473 - MIR SINE MIR -41 221 64 201 295 90 66 chr2 14784325 14784447 -238472136 + MIR SINE MIR 19 143 -65 275 324 56 56 chr2 14785224 14785799 -238470784 - L1M4 LINE L1 -2169 3977 3403 288 247 87 33 chr2 14785840 14786172 -238470411 - L1M4 LINE L1 -2835 3311 2962 466 360 7 7 chr2 14786209 14786362 -238470221 + LTR33 LTR ERVL 28 180 -341 567 219 171 6 chr2 14786476 14786640 -238469943 + LTR33 LTR ERVL 331 521 0 1937 229 71 86 chr2 14786773 14787421 -238469162 + HAL1 LINE L1 1639 2272 -235 2239 95 7 3 chr2 14787421 14787716 -238468867 + AluSc SINE Alu 1 296 -13 1937 229 71 86 chr2 14787716 14787944 -238468639 + HAL1 LINE L1 2272 2502 -5 597 167 68 73 chr2 14787958 14788101 -238468482 + L1 LINE L1 5028 5171 -975 2393 61 0 7 chr2 14788101 14788397 -238468186 + AluY SINE Alu 1 294 -17 597 167 68 73 chr2 14788397 14788445 -238468138 + L1 LINE L1 5171 5218 -928 * 948 247 5 5 chr2 14788433 14788656 -238467927 + L1PB4 LINE L1 5934 6156 0 497 228 15 44 chr2 14789720 14789856 -238466727 - MIR SINE MIR -61 147 16 249 324 104 39 chr2 14790801 14790983 -238465600 + MIR SINE MIR 32 225 -37 1920 147 8 62 chr2 14791248 14791616 -238464967 + THE1A LTR MaLR 1 348 -7 542 257 96 38 chr2 14791706 14792006 -238464577 - MLT1H1 LTR MaLR -129 420 63 193 245 19 38 chr2 14793852 14793905 -238462678 + L2 LINE L2 3188 3239 -33 * 292 225 0 28 chr2 14793901 14793972 -238462611 - MIR SINE MIR 0 262 194 2012 153 0 0 chr2 14794884 14795185 -238461398 - AluSx SINE Alu -11 301 1 1070 217 18 32 chr2 14796354 14796724 -238459859 - MLT2B3 LTR ERVL 0 554 193 196 295 39 26 chr2 14796912 14796990 -238459593 - MIR SINE MIR -17 245 167 2404 58 7 0 chr2 14796990 14797281 -238459302 + AluY SINE Alu 1 293 -18 977 173 40 4 chr2 14797301 14797499 -238459084 - MLT2B3 LTR ERVL -320 200 2 225 184 0 0 chr2 14797528 14797566 -238459017 + L2 LINE L2 3235 3272 0 226 317 73 0 chr2 14798219 14798301 -238458282 + L2 LINE L2 3159 3246 -26 360 218 0 0 chr2 14798312 14798399 -238458184 + (CAG)n Simple_repeat Simple_repeat 2 88 0 395 231 109 101 chr2 14798411 14798649 -238457934 - MIR SINE MIR -3 259 20 221 308 243 0 chr2 14800021 14800128 -238456455 + MIR3 SINE MIR 30 162 -46 617 210 32 0 chr2 14800163 14800287 -238456296 + MER5A DNA MER1_type 1 128 -61 2409 78 7 0 chr2 14800300 14800607 -238455976 + AluY SINE Alu 1 309 -2 195 274 0 0 chr2 14801059 14801110 -238455473 - L3 LINE CR1 -3 1574 1524 * 419 319 42 18 chr2 14801101 14801267 -238455316 - MER5B DNA MER1_type -7 171 2 2351 62 41 0 chr2 14801267 14801558 -238455025 + AluY SINE Alu 1 303 -8 207 0 0 0 chr2 14801583 14801606 -238454977 + (A)n Simple_repeat Simple_repeat 1 23 0 207 291 76 13 chr2 14802466 14802545 -238454038 - MIR SINE MIR -131 131 48 181 286 130 13 chr2 14802559 14802636 -238453947 + MIR3 SINE MIR 112 197 -11 247 307 229 7 chr2 14803715 14803868 -238452715 + MIR SINE MIR 2 188 -74 472 164 0 14 chr2 14804091 14804164 -238452419 - AluS SINE Alu -237 73 2 1298 136 9 33 chr2 14804165 14804378 -238452205 + THE1B LTR MaLR 157 364 0 203 269 103 0 chr2 14804378 14804456 -238452127 + MIR SINE MIR 104 189 -73 380 318 20 26 chr2 14804475 14804626 -238451957 + MIR3 SINE MIR 48 197 -11 2106 242 115 13 chr2 14805379 14805917 -238450666 - MLT1E LTR MaLR 0 593 1 284 299 134 0 chr2 14806504 14806601 -238449982 - L2 LINE L2 -1 3312 3203 321 356 29 11 chr2 14806965 14807139 -238449444 - L2 LINE L2 -541 2773 2597 11851 132 13 8 chr2 14807460 14809276 -238447307 - Tigger1 DNA MER2_type -7 2411 586 3379 141 28 6 chr2 14809563 14810101 -238446482 - Tigger1 DNA MER2_type -1797 621 72 266 338 0 0 chr2 14810838 14810906 -238445677 + MIR3 SINE MIR 93 160 -48 708 265 37 0 chr2 14810993 14811182 -238445401 - MLT1B LTR MaLR -7 383 188 951 118 59 18 chr2 14811323 14811492 -238445091 - MLT1B LTR MaLR -214 176 1 2405 77 0 0 chr2 14811628 14811925 -238444658 + AluY SINE Alu 1 297 -14 245 155 17 0 chr2 14811927 14811985 -238444598 + (TTCA)n Simple_repeat Simple_repeat 3 61 0 298 368 32 0 chr2 14812201 14812326 -238444257 - L2 LINE L2 -2 3270 3142 375 321 51 51 chr2 14814876 14815113 -238441470 - L2 LINE L2 -836 2478 2242 1144 297 136 25 chr2 14815389 14817065 -238439518 - L1ME3 LINE L1 -225 5920 4037 419 313 61 4 chr2 14817200 14817462 -238439121 - L1ME3 LINE L1 -2452 3677 3401 25 31 0 0 chr2 14817551 14817583 -238439000 + AT_rich Low_complexity Low_complexity 1 32 0 336 236 46 52 chr2 14817645 14817819 -238438764 - L1ME3 LINE L1 -4641 1669 1497 802 343 78 35 chr2 14817837 14818620 -238437963 - L1ME3 LINE L1 -4866 1253 511 8066 201 26 16 chr2 14818855 14823288 -238433295 + L1M3f LINE L1 3 4476 -1852 * 19792 161 31 14 chr2 14823287 14823364 -238433219 + L1M1 LINE L1 15 89 -7476 249 57 0 0 chr2 14823364 14823399 -238433184 + (CA)n Simple_repeat Simple_repeat 2 36 0 19792 161 31 14 chr2 14823399 14826918 -238429665 + L1M1 LINE L1 89 3693 -3872 2443 92 0 0 chr2 14826918 14827222 -238429361 + AluY SINE Alu 1 304 -7 19792 161 31 14 chr2 14827222 14827879 -238428704 + L1M1 LINE L1 3693 4338 -3227 24541 42 42 3 chr2 14827881 14831155 -238425428 + L1P LINE L1 1 3399 -2747 241 230 194 71 chr2 14831760 14831888 -238424695 - MIR SINE MIR -60 148 17 193 344 56 0 chr2 14831870 14831960 -238424623 - MIR3 SINE MIR -45 163 69 * 532 315 25 49 chr2 14832382 14832585 -238423998 - MIR3 SINE MIR -5 203 6 388 288 38 76 chr2 14833621 14833805 -238422778 - HAL1b LINE L1 -418 930 754 608 318 44 27 chr2 14833977 14834502 -238422081 - HAL1 LINE L1 -739 1768 1235 379 235 160 45 chr2 14836594 14836632 -238419951 + MIR SINE MIR 40 72 -190 2344 186 36 36 chr2 14836632 14837104 -238419479 - MER70A LTR ERVL 0 472 1 379 235 160 45 chr2 14837104 14837193 -238419390 + MIR SINE MIR 72 149 -113 2161 110 10 7 chr2 14837193 14837494 -238419089 + AluSg SINE Alu 1 302 -8 379 235 160 45 chr2 14837494 14837565 -238419018 + MIR SINE MIR 149 262 0 231 349 125 20 chr2 14837688 14837840 -238418743 - MIR SINE MIR -70 192 25 232 290 43 0 chr2 14838772 14838841 -238417742 - MIR SINE MIR -168 94 23 1119 145 126 5 chr2 14839624 14839838 -238416745 + MSTA LTR MaLR 136 375 -53 493 329 79 22 chr2 14839853 14840130 -238416453 - L3 LINE CR1 -220 1357 1065 295 272 19 39 chr2 14840329 14840432 -238416151 - L2 LINE L2 -30 3283 3183 321 300 40 0 chr2 14841394 14841494 -238415089 - MIR3 SINE MIR -40 168 65 2678 141 26 5 chr2 14841570 14841989 -238414594 + MSTA LTR MaLR 1 428 0 340 330 85 0 chr2 14842976 14843082 -238413501 - MIR SINE MIR -61 147 33 21 0 0 0 chr2 14843123 14843144 -238413439 + AT_rich Low_complexity Low_complexity 1 21 0 2531 39 0 16 chr2 14843363 14843675 -238412908 + AluY SINE Alu 2 308 -3 303 316 96 0 chr2 14843691 14843875 -238412708 - MIR SINE MIR -25 237 32 5906 187 40 19 chr2 14843915 14845141 -238411442 + L1MA4 LINE L1 1 1263 -4402 1998 130 32 0 chr2 14845141 14845418 -238411165 + AluSx SINE Alu 1 286 -26 5906 187 40 19 chr2 14845418 14845755 -238410828 + L1MA4 LINE L1 1263 1592 -4073 7396 220 45 57 chr2 14845758 14848874 -238407709 + L1MA4 LINE L1 2544 5618 -743 2291 152 2 73 chr2 14848872 14849364 -238407219 + L1MA4 LINE L1 5848 6304 -178 * 2318 127 0 3 chr2 14849376 14849723 -238406860 - L1PB1 LINE L1 -17 6134 5789 694 186 45 0 chr2 14849723 14849897 -238406686 + L1MA4 LINE L1 6295 6479 -3 308 326 51 7 chr2 14850992 14851130 -238405453 - MIR SINE MIR 0 262 119 236 327 118 68 chr2 14852107 14852505 -238404078 - L2 LINE L2 -1 3271 2854 2492 111 16 8 chr2 14853866 14854235 -238402348 - THE1C LTR MaLR 0 375 4 9201 127 38 44 chr2 14854238 14855827 -238400756 - THE1C-int LTR MaLR 0 1580 1 2489 112 11 11 chr2 14855827 14856202 -238400381 - THE1C LTR MaLR 0 375 1 1222 174 24 96 chr2 14856202 14856535 -238400048 + MLT1B LTR MaLR 6 314 -76 288 0 0 0 chr2 14856619 14856651 -238399932 + (TG)n Simple_repeat Simple_repeat 2 33 0 266 340 10 10 chr2 14857213 14857313 -238399270 - MIR SINE MIR -131 131 32 428 295 115 16 chr2 14857543 14857726 -238398857 + MIR3 SINE MIR 3 203 -5 343 285 16 32 chr2 14858416 14858539 -238398044 + MIR SINE MIR 25 145 -63 212 304 38 121 chr2 14858893 14859182 -238397401 + L2 LINE L2 2806 3070 -202 264 274 12 60 chr2 14859667 14859751 -238396832 + L2 LINE L2 3191 3270 -2 * 588 278 7 0 chr2 14859746 14859897 -238396686 - MIR SINE MIR 0 262 111 1885 183 102 10 chr2 14860592 14860985 -238395598 + MSTB1 LTR MaLR 4 432 0 475 214 0 0 chr2 14861007 14861096 -238395487 - MIR SINE MIR -73 189 101 1741 141 53 11 chr2 14861131 14861414 -238395169 - AluSx SINE Alu -17 295 1 512 303 75 31 chr2 14861730 14862024 -238394559 + Charlie2 DNA MER1_type 9 315 -2547 2133 142 3 0 chr2 14862327 14862638 -238393945 + AluSx SINE Alu 1 312 0 713 198 30 42 chr2 14862638 14862805 -238393778 + MER58B DNA MER1_type 177 341 0 359 167 0 0 chr2 14862807 14862873 -238393710 + Charlie2 DNA MER1_type 1885 1950 -912 1871 209 12 0 chr2 14862878 14863223 -238393360 + MER68 LTR ERV1 172 520 -42 1940 216 108 21 chr2 14863226 14863809 -238392774 + L1MEc LINE L1 540 1173 -5223 * 3502 256 48 33 chr2 14863805 14865172 -238391411 + L1MEc LINE L1 2478 3864 -2351 1503 239 66 18 chr2 14865178 14865618 -238390965 + MLT1C LTR MaLR 7 467 0 2955 268 88 18 chr2 14865618 14865735 -238390848 + L1MEc LINE L1 3860 3967 -2264 1120 208 39 17 chr2 14865735 14865966 -238390617 + MER8 DNA MER2_type 4 239 0 2955 268 88 18 chr2 14865966 14867171 -238389412 + L1MEc LINE L1 3967 5339 -892 1765 205 54 25 chr2 14867171 14867576 -238389007 + LTR52 LTR ERVL 2 418 -3 2955 268 88 18 chr2 14867576 14867734 -238388849 + L1MEc LINE L1 5339 5485 -746 521 308 0 64 chr2 14867770 14867942 -238388641 - FRAM SINE Alu -15 161 1 3504 199 20 18 chr2 14867944 14868709 -238387874 + L1MB8 LINE L1 5397 6162 -16 2120 105 0 3 chr2 14868711 14869017 -238387566 - AluSx SINE Alu 0 305 1 508 225 0 39 chr2 14869035 14869164 -238387419 + L1M4 LINE L1 4878 5001 -1145 8333 181 24 8 chr2 14869671 14871051 -238385532 - L1P LINE L1 -820 5326 3917 2943 9 0 0 chr2 14871051 14871368 -238385215 + AluYb8 SINE Alu 1 317 -1 8333 181 24 8 chr2 14871368 14871549 -238385034 - L1P LINE L1 -2229 3917 3740 433 281 91 84 chr2 14871629 14872968 -238383615 - L1M4 LINE L1 -1110 5036 3689 230 340 145 31 chr2 14873105 14873264 -238383319 + MER5B DNA MER1_type 1 177 -1 506 316 146 29 chr2 14873349 14873870 -238382713 + L2 LINE L2 2694 3271 -42 224 328 176 0 chr2 14873886 14874005 -238382578 + L2 LINE L2 3174 3313 0 207 260 135 21 chr2 14874571 14874667 -238381916 - MIR SINE MIR -72 136 30 1070 121 153 11 chr2 14875596 14875786 -238380797 - MER20 DNA MER1_type -2 217 1 434 266 40 24 chr2 14876122 14876246 -238380337 + MIR3 SINE MIR 62 187 -21 2847 242 119 104 chr2 14877058 14878391 -238378192 + MLT1A1-int LTR MaLR 5 1357 -14 669 233 7 0 chr2 14878403 14878549 -238378034 + MLT1A1 LTR MaLR 1 147 -218 1378 219 54 3 chr2 14878555 14879029 -238377554 + AluJb SINE Alu 1 489 0 805 115 0 20 chr2 14879051 14879199 -238377384 + (GAAA)n Simple_repeat Simple_repeat 3 147 0 198 103 0 0 chr2 14879200 14879229 -238377354 + (CAAG)n Simple_repeat Simple_repeat 4 32 0 801 167 42 0 chr2 14879276 14879420 -238377163 + MLT1A1 LTR MaLR 216 365 0 866 250 73 88 chr2 14879816 14880128 -238376455 - L1MC4a LINE L1 -1905 5903 5601 5610 87 3 30 chr2 14880128 14880887 -238375696 + L1PA10 LINE L1 5419 6156 -12 866 250 73 88 chr2 14880887 14881106 -238375477 - L1MC4a LINE L1 -2207 5601 5380 226 304 18 0 chr2 14881109 14881165 -238375418 + L2 LINE L2 3201 3257 -15 389 335 57 5 chr2 14881198 14881392 -238375191 - MIR SINE MIR -32 230 27 2369 230 69 84 chr2 14881797 14882101 -238374482 - MER69B DNA AcHobo -1616 910 603 1935 144 7 7 chr2 14882101 14882406 -238374177 - AluSg SINE Alu -5 305 1 2369 230 69 84 chr2 14882406 14882924 -238373659 - MER69B DNA AcHobo -1923 603 100 418 317 21 7 chr2 14883071 14883213 -238373370 + MIR SINE MIR 49 192 -70 321 253 152 10 chr2 14884230 14884329 -238372254 - MIR SINE MIR -69 193 81 189 147 0 0 chr2 14885830 14885864 -238370719 + (TTTTC)n Simple_repeat Simple_repeat 5 38 0 747 226 38 85 chr2 14886830 14887065 -238369518 - MER58A DNA MER1_type 0 224 1 223 273 0 0 chr2 14887729 14887773 -238368810 + MIR SINE MIR 38 81 -127 283 296 61 10 chr2 14887924 14888022 -238368561 + L2 LINE L2 3170 3272 0 262 236 47 66 chr2 14888624 14888730 -238367853 + MIR SINE MIR 95 198 -64 235 160 0 60 chr2 14889101 14889151 -238367432 + MIR SINE MIR 126 172 -90 2309 89 0 0 chr2 14889908 14890215 -238366368 + AluSg SINE Alu 1 307 0 2667 103 6 0 chr2 14890744 14891093 -238365490 + L1PA8A LINE L1 5763 6113 -18 207 0 0 0 chr2 14891097 14891120 -238365463 + (TAA)n Simple_repeat Simple_repeat 2 24 0 201 357 28 2 chr2 14891281 14891365 -238365218 - MIR SINE MIR -87 121 37 21 57 0 0 chr2 14892080 14892115 -238364468 + AT_rich Low_complexity Low_complexity 1 35 0 227 306 82 20 chr2 14892566 14892713 -238363870 + L2 LINE L2 2907 3062 -210 214 353 53 30 chr2 14892811 14892944 -238363639 + L2 LINE L2 3118 3253 -19 364 362 14 14 chr2 14893272 14893410 -238363173 - L3 LINE CR1 -7 1570 1433 2314 197 82 37 chr2 14893435 14893998 -238362585 + MLT1E2 LTR MaLR 37 624 -2 520 276 115 0 chr2 14893998 14894190 -238362393 - L3 LINE CR1 -123 1454 1241 422 283 7 14 chr2 14894606 14894744 -238361839 + L1MEc LINE L1 44 180 -6216 428 376 5 9 chr2 14894829 14895039 -238361544 + L1MEc LINE L1 196 404 -5992 1391 234 86 27 chr2 14895243 14895684 -238360899 + MLT1C LTR MaLR 1 467 0 258 283 156 55 chr2 14895688 14895996 -238360587 + L1MEc LINE L1 660 998 -5398 198 373 0 17 chr2 14896140 14896199 -238360384 + MIR SINE MIR 46 103 -159 267 164 104 45 chr2 14896324 14896391 -238360192 + MLT1K LTR MaLR 179 249 -339 361 213 13 0 chr2 14897322 14897397 -238359186 - MIR SINE MIR -69 139 64 489 291 135 13 chr2 14898081 14898311 -238358272 - MIR SINE MIR 0 262 5 1854 283 108 46 chr2 14898887 14900157 -238356426 + HAL1 LINE L1 370 1718 -789 390 276 128 74 chr2 14900220 14900463 -238356120 + MLT1J2 LTR MaLR 37 292 -158 836 237 121 130 chr2 14900547 14901092 -238355491 + MLT1H1 LTR MaLR 3 555 0 363 283 171 42 chr2 14901106 14901579 -238355004 + HAL1 LINE L1 1720 2253 -254 648 296 82 10 chr2 14901697 14901903 -238354680 + MIR SINE MIR 20 240 -22 309 361 42 0 chr2 14902102 14902221 -238354362 + MIR SINE MIR 121 244 -18 279 287 197 28 chr2 14902270 14902524 -238354059 + L3b LINE CR1 1165 1461 -122 188 271 0 17 chr2 14902749 14902808 -238353775 + L3b LINE CR1 1173 1230 -353 27 0 0 0 chr2 14905590 14905617 -238350966 + AT_rich Low_complexity Low_complexity 1 27 0 195 180 20 60 chr2 14906163 14906213 -238350370 - MIR3 SINE MIR -2 206 159 291 54 0 0 chr2 14907958 14907995 -238348588 + (TG)n Simple_repeat Simple_repeat 2 38 0 1731 93 0 24 chr2 14908013 14908261 -238348322 + AluSx SINE Alu 64 305 -7 426 277 204 22 chr2 14908267 14908758 -238347825 + L1ME4a LINE L1 5512 6091 -30 1994 118 0 36 chr2 14908805 14909109 -238347474 + AluSx SINE Alu 1 293 -19 742 181 8 15 chr2 14909305 14909438 -238347145 - FLAM_A SINE Alu -1 132 1 201 149 85 21 chr2 14909850 14909897 -238346686 - MIR SINE MIR -114 94 45 32 0 0 0 chr2 14909929 14909961 -238346622 + AT_rich Low_complexity Low_complexity 1 32 0 628 223 38 13 chr2 14910198 14910355 -238346228 + MER5B DNA MER1_type 4 164 -14 479 157 293 14 chr2 14910360 14910500 -238346083 + MER5A DNA MER1_type 11 189 0 385 281 74 8 chr2 14911069 14911190 -238345393 - MER94 DNA DNA -1 133 5 369 250 73 61 chr2 14911772 14911936 -238344647 - MIR SINE MIR -12 250 85 22 0 0 0 chr2 14912477 14912499 -238344084 + AT_rich Low_complexity Low_complexity 1 22 0 209 338 0 0 chr2 14912533 14912601 -238343982 - L2 LINE L2 -11 3302 3235 200 367 54 34 chr2 14912739 14912886 -238343697 + L2 LINE L2 3123 3272 0 324 252 48 19 chr2 14913630 14913733 -238342850 - MER5A DNA MER1_type -21 168 63 2516 54 0 0 chr2 14913735 14914030 -238342553 - L1PA4 LINE L1 -1 6154 5860 266 59 0 0 chr2 14914030 14914064 -238342519 + L1PA4 LINE L1 5830 5863 -309 702 204 116 0 chr2 14914404 14914551 -238342032 - FAM SINE Alu -10 165 2 465 341 38 19 chr2 14914901 14915112 -238341471 - MIR SINE MIR -7 255 41 1235 136 16 62 chr2 14915766 14916008 -238340575 + L1PA14 LINE L1 5930 6160 -1 1788 186 42 8 chr2 14916146 14916507 -238340076 - L1MA9 LINE L1 -1 6311 5939 2311 135 122 13 chr2 14918047 14918433 -238338150 + MSTA LTR MaLR 1 428 0 195 359 51 26 chr2 14918470 14918587 -238337996 + MIR SINE MIR 34 153 -109 254 353 84 21 chr2 14919500 14919690 -238336893 - MIR SINE MIR -28 234 33 249 139 14 56 chr2 14919928 14920000 -238336583 - LTR66 LTR ERVL -156 454 386 5081 112 207 122 chr2 14920302 14921775 -238334808 - pTR5 LTR ERV1 0 2438 741 400 313 154 8 chr2 14922024 14922264 -238334319 - L2 LINE L2 0 3313 3039 1385 201 7 34 chr2 14923184 14923482 -238333101 - AluJb SINE Alu -21 291 2 1246 180 20 16 chr2 14923793 14924037 -238332546 - L1MB1 LINE L1 -1 6167 5923 224 250 40 26 chr2 14924162 14924238 -238332345 - MIR SINE MIR -95 113 37 414 347 78 4 chr2 14924876 14925121 -238331462 + L1ME LINE L1 5556 5818 -303 447 291 63 13 chr2 14926467 14926625 -238329958 + MIR SINE MIR 20 185 -77 28 0 0 0 chr2 14927478 14927506 -238329077 + AT_rich Low_complexity Low_complexity 1 28 0 315 301 44 64 chr2 14927556 14927749 -238328834 - MIR SINE MIR -60 202 12 351 65 0 0 chr2 14928274 14928320 -238328263 + (CA)n Simple_repeat Simple_repeat 1 46 0 * 384 181 0 0 chr2 14928311 14928394 -238328189 + (TA)n Simple_repeat Simple_repeat 2 84 0 258 325 40 8 chr2 14928453 14928579 -238328004 - LTR40a LTR ERVL -159 360 231 225 296 96 0 chr2 14928765 14928880 -238327703 + LTR68 LTR ERV1 615 740 0 22 0 0 0 chr2 14928966 14928988 -238327595 + AT_rich Low_complexity Low_complexity 1 22 0 260 327 46 33 chr2 14929398 14929551 -238327032 - MIR SINE MIR -96 166 12 15007 194 28 35 chr2 14930092 14931536 -238325047 + L1MA5A LINE L1 1045 2499 -4440 2060 129 3 3 chr2 14931536 14931831 -238324752 - AluSx SINE Alu -17 295 1 15007 194 28 35 chr2 14931831 14932176 -238324407 + L1MA5A LINE L1 2499 2845 -4094 1817 164 7 7 chr2 14932176 14932463 -238324120 + AluSx SINE Alu 1 287 -25 15007 194 28 35 chr2 14932463 14934728 -238321855 + L1MA5A LINE L1 2845 5126 -1813 1977 143 97 32 chr2 14934728 14935070 -238321513 - THE1B LTR MaLR 0 364 1 15007 194 28 35 chr2 14935070 14935522 -238321061 + L1MA5A LINE L1 5126 5580 -1359 1251 102 23 0 chr2 14935522 14935698 -238320885 - L1MA2 LINE L1 0 6304 6125 15007 194 28 35 chr2 14935698 14937112 -238319471 + L1MA5A LINE L1 5580 6937 -2 1665 213 25 17 chr2 14938287 14938649 -238317934 + MLT1A1 LTR MaLR 1 365 0 333 338 66 7 chr2 14938676 14938812 -238317771 - MIR SINE MIR -116 146 3 241 326 103 87 chr2 14939566 14939624 -238316959 - L2 LINE L2 -10 3262 3206 2067 120 0 23 chr2 14939624 14939924 -238316659 + AluSx SINE Alu 1 293 -19 241 326 103 87 chr2 14939924 14940049 -238316534 - L2 LINE L2 -66 3206 3076 194 320 72 52 chr2 14940134 14940231 -238316352 - L2 LINE L2 -202 3070 2972 321 191 58 164 chr2 14940581 14940770 -238315813 - LTR16A LTR ERVL -2 448 280 206 313 152 0 chr2 14940863 14940962 -238315621 + MIR SINE MIR 139 252 -10 480 274 176 49 chr2 14941138 14941507 -238315076 + L2 LINE L2 2291 2706 -608 23 54 0 0 chr2 14941521 14941558 -238315025 + AT_rich Low_complexity Low_complexity 1 37 0 551 292 73 61 chr2 14941806 14942481 -238314102 - L1ME2 LINE L1 -217 5947 5265 4864 118 22 20 chr2 14942633 14943399 -238313184 - L1PA15 LINE L1 0 6165 5398 228 266 242 23 chr2 14944999 14945127 -238311456 - L2 LINE L2 -21 3251 3096 1798 178 22 3 chr2 14945409 14945729 -238310854 - L1M2 LINE L1 -513 5799 5474 332 237 154 19 chr2 14945918 14946074 -238310509 - L1MCc LINE L1 -6223 200 24 24 0 0 0 chr2 14946436 14946460 -238310123 + AT_rich Low_complexity Low_complexity 1 24 0 659 252 73 23 chr2 14947613 14947831 -238308752 + MIR SINE MIR 22 250 -12 269 254 18 55 chr2 14947852 14947962 -238308621 - L2 LINE L2 -7 3306 3201 216 309 114 60 chr2 14948602 14948900 -238307683 - L2 LINE L2 -5 3267 2954 337 336 9 9 chr2 14949821 14949931 -238306652 + MIR SINE MIR 30 139 -69 308 189 14 0 chr2 14950088 14950162 -238306421 + CT-rich Low_complexity Low_complexity 1 75 0 693 223 80 27 chr2 14950184 14950372 -238306211 - MER46C DNA MER2_type -2 336 139 264 271 136 12 chr2 14950540 14950713 -238305870 + MIR SINE MIR 2 192 -68 288 246 0 14 chr2 14950883 14950952 -238305631 + L2 LINE L2 3246 3313 0 448 279 58 41 chr2 14951246 14951418 -238305165 + MIR SINE MIR 14 188 -74 255 378 51 47 chr2 14951679 14951954 -238304629 + L2 LINE L2 2948 3223 -49 544 299 23 73 chr2 14952136 14952397 -238304186 + Charlie2 DNA MER1_type 2 249 -2613 1666 209 67 34 chr2 14952466 14953060 -238303523 + Charlie2 DNA MER1_type 2224 2837 -25 396 241 145 28 chr2 14953173 14953318 -238303265 + MIR3 SINE MIR 17 178 -30 466 296 64 10 chr2 14953956 14954160 -238302423 - MIR SINE MIR -11 251 36 187 300 43 0 chr2 14954166 14954236 -238302347 + MIR SINE MIR 33 105 -103 331 294 119 0 chr2 14954264 14954407 -238302176 - MIR SINE MIR -53 209 50 410 246 79 8 chr2 14954730 14954856 -238301727 - MER103 DNA DNA -1 165 31 227 271 96 66 chr2 14954978 14955144 -238301439 - L2 LINE L2 -1211 2103 1933 472 260 60 13 chr2 14955556 14955706 -238300877 + L1MC4 LINE L1 6464 6620 -1422 875 281 62 11 chr2 14955914 14956241 -238300342 + L1MC4 LINE L1 7472 7708 -100 2291 97 6 3 chr2 14956655 14956966 -238299617 - AluSx SINE Alu 0 312 1 3093 124 22 0 chr2 14957280 14957739 -238298844 - L1PB1 LINE L1 -8 6143 5675 1780 100 0 0 chr2 14957739 14957980 -238298603 + L1PB1 LINE L1 5452 5692 -459 1301 141 13 53 chr2 14958018 14958245 -238298338 + MER20 DNA MER1_type 1 218 -1 222 254 15 45 chr2 14959104 14959171 -238297412 + L2 LINE L2 3203 3267 -5 375 276 372 0 chr2 14959497 14959696 -238296887 + L3 LINE CR1 1123 1395 -182 294 50 0 0 chr2 14959784 14959824 -238296759 + (A)n Simple_repeat Simple_repeat 1 40 0 320 336 53 0 chr2 14959872 14959985 -238296598 + MIR SINE MIR 32 150 -112 446 280 14 21 chr2 14960511 14960654 -238295929 + MIR SINE MIR 56 197 -65 230 317 60 30 chr2 14961113 14961296 -238295287 + MIR SINE MIR 20 256 -6 238 322 0 0 chr2 14962983 14963042 -238293541 + L2 LINE L2 3201 3259 -13 1997 153 15 73 chr2 14963349 14963761 -238292822 + MLT1B LTR MaLR 3 390 0 316 260 89 41 chr2 14963849 14963972 -238292611 - L1 LINE L1 -3482 2664 2536 * 9034 165 37 81 chr2 14963970 14964603 -238291980 + L1MB1 LINE L1 3093 3752 -2560 219 69 0 0 chr2 14964603 14964632 -238291951 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 9034 165 37 81 chr2 14964632 14966877 -238289706 + L1MB1 LINE L1 3752 5831 -481 1663 182 0 67 chr2 14966877 14967206 -238289377 + AluJb SINE Alu 1 307 -5 813 131 0 0 chr2 14967206 14967336 -238289247 + (GGAGA)n Simple_repeat Simple_repeat 2 131 0 2123 141 35 3 chr2 14967341 14967681 -238288902 + L1MB1 LINE L1 5818 6168 0 319 277 40 79 chr2 14967938 14968115 -238288468 + MIR SINE MIR 28 197 -65 205 200 0 22 chr2 14968462 14968507 -238288076 + (TAG)n Simple_repeat Simple_repeat 3 46 0 2572 154 46 2 chr2 14968632 14969042 -238287541 - MSTC LTR MaLR 0 428 1 396 269 21 0 chr2 14970770 14970863 -238285720 - MIR3 SINE MIR -52 156 62 407 224 17 43 chr2 14970863 14970979 -238285604 + MLT1G1 LTR MaLR 1 113 -482 693 223 129 45 chr2 14971028 14971180 -238285403 + MER20 DNA MER1_type 1 176 -43 2277 97 0 0 chr2 14971180 14971478 -238285105 + AluSg SINE Alu 1 298 -12 693 223 129 45 chr2 14971478 14971527 -238285056 + MER20 DNA MER1_type 176 219 0 321 284 95 35 chr2 14971864 14972367 -238284216 - L1ME LINE L1 -452 5669 5127 1615 164 26 10 chr2 14972683 14972987 -238283596 + AluJb SINE Alu 1 309 -3 2315 102 10 0 chr2 14973037 14973340 -238283243 + AluSq SINE Alu 5 310 -3 266 260 47 53 chr2 14973529 14973698 -238282885 - L1ME3A LINE L1 -242 5927 5757 292 308 91 35 chr2 14973868 14974154 -238282429 + L1MD2 LINE L1 4711 5012 -1134 726 141 0 0 chr2 14974161 14974289 -238282294 + (GGAA)n Simple_repeat Simple_repeat 1 128 0 213 216 11 34 chr2 14974406 14974494 -238282089 + (TATAA)n Simple_repeat Simple_repeat 2 87 0 385 281 118 58 chr2 14974680 14975094 -238281489 + L1MD2 LINE L1 5365 5845 -324 564 274 169 37 chr2 14975117 14975548 -238281035 + LTR33 LTR ERVL 26 513 -8 255 61 0 0 chr2 14975597 14975630 -238280953 + (CA)n Simple_repeat Simple_repeat 2 34 0 2093 114 94 28 chr2 14976867 14977219 -238279364 - THE1C LTR MaLR 0 375 1 368 303 49 21 chr2 14977253 14977395 -238279188 - L2 LINE L2 -5 3267 3122 2449 100 0 0 chr2 14977509 14977818 -238278765 - AluSg SINE Alu -1 309 1 197 341 29 58 chr2 14977821 14977994 -238278589 - L2 LINE L2 -224 3048 2881 248 333 86 8 chr2 14978021 14978138 -238278445 - L2 LINE L2 -535 2779 2654 285 207 74 58 chr2 14978552 14978673 -238277910 - L1ME4a LINE L1 -32 6089 5967 297 360 22 11 chr2 14979051 14979229 -238277354 + MIR SINE MIR 19 198 -64 1827 264 62 14 chr2 14980316 14980835 -238275748 - MLT1H1 LTR MaLR 0 555 12 596 288 68 27 chr2 14981722 14981941 -238274642 + MIR SINE MIR 33 260 -2 400 308 0 0 chr2 14982119 14982223 -238274360 - L2 LINE L2 0 3313 3210 377 335 72 0 chr2 14982587 14982754 -238273829 - MIR SINE MIR -36 226 48 396 320 48 52 chr2 14983645 14983876 -238272707 + MIR SINE MIR 21 250 -12 1859 124 9 53 chr2 14983877 14984199 -238272384 - AluJb SINE Alu -4 308 1 243 191 0 0 chr2 14984733 14984773 -238271810 + MLT2B1 LTR ERVL 2 41 -373 319 190 0 0 chr2 14984773 14984831 -238271752 + MER52A LTR ERV1 1 58 -1697 4712 200 93 15 chr2 14985428 14986586 -238269997 + MER52A LTR ERV1 202 1512 -243 335 62 21 0 chr2 14986591 14986639 -238269944 + MER52C LTR ERV1 1230 1278 0 1230 243 101 42 chr2 14986639 14987056 -238269527 + MLT2B1 LTR ERVL 38 486 -34 309 26 0 0 chr2 14987056 14987094 -238269489 + (CA)n Simple_repeat Simple_repeat 2 39 0 1230 243 101 42 chr2 14987094 14987132 -238269451 + MLT2B1 LTR ERVL 486 520 0 197 297 16 31 chr2 14987659 14987723 -238268860 - L2 LINE L2 0 3272 3210 196 343 205 24 chr2 14988522 14988688 -238267895 - MIR3 SINE MIR 0 208 13 820 165 8 0 chr2 14988984 14989117 -238267466 - AluJo SINE Alu -178 134 1 448 262 95 48 chr2 14989208 14989376 -238267207 - MIR3 SINE MIR -7 201 26 473 217 151 60 chr2 14989447 14989579 -238267004 - Charlie8 DNA MER1_type -105 225 74 2451 85 0 3 chr2 14989579 14989884 -238266699 - AluSg SINE Alu -6 304 1 473 217 151 60 chr2 14989884 14989917 -238266666 - Charlie8 DNA MER1_type -256 74 45 1182 142 0 21 chr2 14991130 14991320 -238265263 + Tigger2a DNA MER2_type 24 209 -225 2205 132 0 0 chr2 14991358 14991669 -238264914 - AluSx SINE Alu -1 311 1 1246 181 33 8 chr2 14991669 14991904 -238264679 + Tigger2a DNA MER2_type 191 434 0 2220 120 0 0 chr2 14992970 14993269 -238263314 + AluSx SINE Alu 1 299 -13 752 236 140 14 chr2 14993340 14993632 -238262951 + L1ME4a LINE L1 5541 5869 -252 2249 135 33 33 chr2 14995059 14995423 -238261160 - THE1B LTR MaLR 0 364 1 497 223 120 65 chr2 14996873 14997057 -238259526 - LTR16C LTR ERVL -151 340 147 1415 188 26 32 chr2 14997279 14997628 -238258955 - MLT1A1 LTR MaLR 0 428 20 251 182 227 0 chr2 14997670 14997736 -238258847 + MIR SINE MIR 182 262 0 653 75 58 23 chr2 14997754 14997927 -238258656 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 695 85 45 28 chr2 14997955 14998131 -238258452 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 403 57 119 16 chr2 14998108 14998412 -238258171 + (TA)n Simple_repeat Simple_repeat 1 335 0 * 430 102 88 0 chr2 14998420 14998567 -238258016 + (TTATA)n Simple_repeat Simple_repeat 5 164 0 966 264 5 0 chr2 14998570 14998763 -238257820 + MER58A DNA MER1_type 2 195 -29 264 167 0 0 chr2 14998792 14998840 -238257743 + (CA)n Simple_repeat Simple_repeat 1 48 0 1887 122 33 0 chr2 14998861 14999132 -238257451 + AluSg SINE Alu 1 280 -30 238 290 65 9 chr2 14999163 14999270 -238257313 + L1ME4a LINE L1 6003 6115 -6 378 287 66 12 chr2 14999376 14999543 -238257040 + Charlie7 DNA MER1_type 66 241 -2371 606 251 40 60 chr2 14999643 14999894 -238256689 + Charlie7 DNA MER1_type 905 1150 -1462 257 302 73 0 chr2 14999901 14999997 -238256586 - MER91C DNA MER1_type -14 126 24 3963 220 117 31 chr2 15000020 15001296 -238255287 + Charlie7 DNA MER1_type 1148 2533 -79 22 56 0 0 chr2 15001352 15001388 -238255195 + AT_rich Low_complexity Low_complexity 1 36 0 182 163 265 0 chr2 15002272 15002321 -238254262 - L2 LINE L2 -4 3309 3248 639 117 0 0 chr2 15002814 15002917 -238253666 + (GGAA)n Simple_repeat Simple_repeat 4 106 0 279 206 83 33 chr2 15003154 15003249 -238253334 + MER5A DNA MER1_type 30 119 -59 183 246 53 18 chr2 15003272 15003329 -238253254 - L2 LINE L2 0 3313 3255 275 319 121 0 chr2 15003374 15003490 -238253093 + L2 LINE L2 3142 3271 -1 2539 132 22 0 chr2 15003831 15004187 -238252396 + THE1B LTR MaLR 1 364 0 302 283 81 0 chr2 15004207 15004306 -238252277 - L2 LINE L2 -5 3308 3202 3070 67 12 7 chr2 15004381 15004785 -238251798 - L1PA7 LINE L1 -495 5659 5254 3876 64 0 4 chr2 15004788 15005244 -238251339 + L1PA7 LINE L1 5688 6141 -13 386 259 75 20 chr2 15005316 15005463 -238251120 - L3 LINE CR1 -813 764 610 339 113 0 0 chr2 15006260 15006322 -238250261 + (TC)n Simple_repeat Simple_repeat 1 62 0 183 371 21 10 chr2 15006356 15006453 -238250130 + L2 LINE L2 2985 3082 -190 1118 298 45 13 chr2 15006536 15006918 -238249665 - LTR16C LTR ERVL 0 491 98 1397 200 23 58 chr2 15006941 15007286 -238249297 + MLT1B LTR MaLR 58 390 0 249 128 0 0 chr2 15007450 15007489 -238249094 - MIR SINE MIR -6 256 218 2379 213 44 21 chr2 15007515 15008083 -238248500 - L1ME1 LINE L1 -5 6161 5581 413 324 111 5 chr2 15008083 15008290 -238248293 - MIR SINE MIR -32 230 2 1812 168 20 20 chr2 15009340 15009697 -238246886 - MLT1A1 LTR MaLR -5 360 4 304 325 181 48 chr2 15009795 15010109 -238246474 + HAL1 LINE L1 17 372 -2135 684 255 132 38 chr2 15010397 15010738 -238245845 + HAL1 LINE L1 529 901 -1606 328 278 68 12 chr2 15010898 15011060 -238245523 + HAL1 LINE L1 2173 2343 -164 263 187 44 0 chr2 15011705 15011796 -238244787 + (TTATA)n Simple_repeat Simple_repeat 3 97 0 302 330 27 66 chr2 15012176 15012434 -238244149 + HAL1b LINE L1 55 302 -1046 265 299 127 28 chr2 15012601 15012885 -238243698 + HAL1b LINE L1 526 837 -511 1380 232 160 77 chr2 15013040 15013157 -238243426 + L1MC5 LINE L1 6476 6582 -1379 378 0 0 0 chr2 15013157 15013199 -238243384 + (TG)n Simple_repeat Simple_repeat 2 43 0 1380 232 160 77 chr2 15013199 15014003 -238242580 + L1MC5 LINE L1 6582 7519 -442 2159 167 21 5 chr2 15014003 15014386 -238242197 - MLT1B LTR MaLR -1 389 1 1380 232 160 77 chr2 15014386 15014468 -238242115 + L1MC5 LINE L1 7519 7593 -368 248 295 53 47 chr2 15014486 15014676 -238241907 + L1ME3A LINE L1 5969 6159 -11 271 165 10 136 chr2 15014686 15014789 -238241794 + HAL1 LINE L1 2306 2395 -112 181 296 0 82 chr2 15014928 15015026 -238241557 + L2 LINE L2 3183 3272 0 21 0 0 0 chr2 15015325 15015346 -238241237 + AT_rich Low_complexity Low_complexity 1 21 0 1307 205 7 40 chr2 15015347 15015644 -238240939 - AluJo SINE Alu -21 291 5 1270 189 120 49 chr2 15016092 15016246 -238240337 - MLT1B LTR MaLR -16 374 232 216 0 0 0 chr2 15016246 15016270 -238240313 + (GA)n Simple_repeat Simple_repeat 2 25 0 1270 189 120 49 chr2 15016270 15016464 -238240119 - MLT1B LTR MaLR -158 232 1 361 281 34 20 chr2 15017388 15017534 -238239049 + MER103 DNA DNA 16 163 -3 979 235 127 67 chr2 15018226 15018754 -238237829 + MLT1H1 LTR MaLR 2 541 -4 2021 83 9 94 chr2 15019136 15019475 -238237108 - AluSq SINE Alu -3 310 1 459 273 84 21 chr2 15020084 15020227 -238236356 - MIR SINE MIR -19 243 92 275 331 40 54 chr2 15020295 15020443 -238236140 - MIR SINE MIR -75 187 42 1813 209 10 33 chr2 15021359 15021846 -238234737 + Charlie4a DNA MER1_type 26 501 -7 2267 120 31 111 chr2 15021986 15022436 -238234147 - MSTB LTR MaLR -12 414 1 243 167 0 0 chr2 15023185 15023227 -238233356 - LTR16C LTR ERVL -1 490 449 2308 120 35 107 chr2 15023237 15023696 -238232887 + MSTB LTR MaLR 1 426 0 7143 195 41 33 chr2 15023700 15025002 -238231581 + MLT1H1-int LTR MaLR 4 1260 -391 2581 161 26 0 chr2 15025002 15025419 -238231164 - MSTA LTR MaLR 0 428 1 7143 195 41 33 chr2 15025419 15025815 -238230768 + MLT1H1-int LTR MaLR 1260 1651 0 2422 175 19 9 chr2 15025815 15026237 -238230346 + MSTB LTR MaLR 1 426 0 806 214 33 33 chr2 15026243 15026458 -238230125 - LTR16C LTR ERVL -87 404 190 501 332 62 5 chr2 15026610 15026818 -238229765 - MIR SINE MIR -7 255 36 642 212 179 0 chr2 15026884 15027035 -238229548 + MER45A DNA AcHobo 1 178 0 1151 213 106 10 chr2 15027959 15028260 -238228323 + MER46C DNA MER2_type 1 330 -8 1598 199 93 30 chr2 15029764 15030184 -238226399 - L1MB5 LINE L1 -15 6159 5711 246 325 151 0 chr2 15030352 15030518 -238226065 - MIR SINE MIR -70 192 2 286 232 207 0 chr2 15030692 15030774 -238225809 + Charlie7 DNA MER1_type 1 99 -2513 29 0 0 0 chr2 15031019 15031048 -238225535 + AT_rich Low_complexity Low_complexity 1 29 0 270 300 11 11 chr2 15031228 15031318 -238225265 + MIR SINE MIR 48 137 -125 360 0 0 0 chr2 15031435 15031479 -238225104 - L1PA3 LINE L1 -3 6152 6109 2007 168 94 8 chr2 15031508 15031902 -238224681 - MSTA LTR MaLR 0 428 1 3963 120 35 33 chr2 15031905 15032597 -238223986 + L1MC1 LINE L1 5636 6328 -5 276 263 70 61 chr2 15032953 15033067 -238223516 - L2 LINE L2 -21 3251 3137 345 318 48 32 chr2 15033176 15033365 -238223218 - L2 LINE L2 -215 3057 2866 294 29 0 0 chr2 15033889 15033924 -238222659 + (TC)n Simple_repeat Simple_repeat 2 36 0 1583 208 14 20 chr2 15033933 15034289 -238222294 + MLT1A1 LTR MaLR 11 364 -1 216 67 0 0 chr2 15034289 15034319 -238222264 + (TC)n Simple_repeat Simple_repeat 1 30 0 1434 81 72 32 chr2 15035604 15035825 -238220758 + MER30 DNA MER1_type 1 230 0 921 239 43 10 chr2 15036172 15036381 -238220202 - MER58A DNA MER1_type -8 216 1 1466 196 68 27 chr2 15036382 15036509 -238220074 + MLT1A1 LTR MaLR 1 121 -244 1927 115 68 41 chr2 15036509 15036874 -238219709 + THE1C LTR MaLR 1 375 0 1466 196 68 27 chr2 15036874 15037083 -238219500 + MLT1A1 LTR MaLR 121 351 -14 896 145 50 13 chr2 15037614 15037773 -238218810 - FRAM SINE Alu -14 162 1 200 329 61 42 chr2 15037934 15038147 -238218436 - L2 LINE L2 -199 3073 2857 278 50 25 0 chr2 15039331 15039371 -238217212 + (TG)n Simple_repeat Simple_repeat 1 41 0 1845 245 85 35 chr2 15039701 15040243 -238216340 + MLT1G1 LTR MaLR 2 570 -25 307 309 105 17 chr2 15040264 15040424 -238216159 + MIR SINE MIR 43 214 -48 225 259 0 37 chr2 15040756 15040810 -238215773 + HAL1 LINE L1 619 670 -1837 268 243 9 9 chr2 15040952 15041059 -238215524 + CT-rich Low_complexity Low_complexity 2 108 0 267 284 45 78 chr2 15041147 15041349 -238215234 - MIR SINE MIR -45 217 23 216 0 0 0 chr2 15041517 15041541 -238215042 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 356 294 140 47 chr2 15042993 15043207 -238213376 - MIR SINE MIR -21 241 8 198 240 147 0 chr2 15043374 15043449 -238213134 - L3 LINE CR1 -239 1338 1253 3117 77 70 0 chr2 15043484 15043856 -238212727 + MLT2A1 LTR ERVL 1 406 -38 253 61 20 20 chr2 15043856 15043905 -238212678 + (TA)n Simple_repeat Simple_repeat 1 49 0 3117 77 70 0 chr2 15043905 15043947 -238212636 + MLT2A1 LTR ERVL 406 444 0 273 288 68 34 chr2 15044304 15044422 -238212161 - L2 LINE L2 -7 3306 3185 223 222 67 4 chr2 15044526 15044591 -238211992 + MIR SINE MIR 4 73 -135 351 78 0 0 chr2 15045220 15045271 -238211312 + (TG)n Simple_repeat Simple_repeat 2 52 0 800 214 52 6 chr2 15045555 15045728 -238210855 + MER5A DNA MER1_type 7 187 -2 300 323 81 10 chr2 15045811 15045910 -238210673 - L2 LINE L2 -6 3307 3202 867 283 60 0 chr2 15045920 15046153 -238210430 + MIR SINE MIR 13 259 -3 397 323 30 12 chr2 15046887 15047051 -238209532 + L3 LINE CR1 1232 1398 -179 2316 77 6 6 chr2 15047148 15047460 -238209123 + AluSp SINE Alu 1 312 -1 400 373 61 32 chr2 15048038 15048381 -238208202 - L2 LINE L2 -1 3271 2919 731 239 13 32 chr2 15048417 15048647 -238207936 + MER57-int LTR ERV1 2357 3561 -2385 1112 183 39 128 chr2 15048653 15048887 -238207696 + MER57-int LTR ERV1 2477 2730 -2206 1951 159 86 21 chr2 15048887 15049259 -238207324 + MSTD LTR MaLR 1 396 0 1112 183 39 128 chr2 15049259 15049310 -238207273 + MER57-int LTR ERV1 2730 2784 -2152 1569 174 87 3 chr2 15049310 15049598 -238206985 - AluJb SINE Alu 0 312 1 1112 183 39 128 chr2 15049598 15049769 -238206814 + MER57-int LTR ERV1 2784 2875 -2061 808 169 71 19 chr2 15049769 15049923 -238206660 + FRAM SINE Alu 5 166 0 1112 183 39 128 chr2 15049923 15050086 -238206497 + MER57-int LTR ERV1 2875 3051 -1885 * 1620 196 31 54 chr2 15050074 15050466 -238206117 + MER57-int LTR ERV1 5190 5572 -1965 1867 304 47 47 chr2 15050978 15051680 -238204903 + MER57-int LTR ERV1 6233 6937 -600 2032 119 0 7 chr2 15051680 15051982 -238204601 - AluSx SINE Alu -8 304 5 1867 304 47 47 chr2 15051982 15052191 -238204392 + MER57-int LTR ERV1 6936 7144 -393 798 187 215 124 chr2 15052191 15052565 -238204018 + MER57B LTR ERV1 1 403 0 669 309 119 4 chr2 15053199 15053477 -238203106 + L3 LINE CR1 1264 1573 -4 313 331 105 8 chr2 15053543 15053667 -238202916 + MIR SINE MIR 46 181 -81 207 297 123 32 chr2 15054990 15055145 -238201438 + MIR SINE MIR 89 257 -5 1590 212 66 20 chr2 15056228 15056577 -238200006 - MLT1A1 LTR MaLR 0 365 1 437 321 73 0 chr2 15057583 15057748 -238198835 + MIR SINE MIR 8 184 -78 194 300 0 0 chr2 15058239 15058279 -238198304 - MIR SINE MIR -163 99 60 228 285 8 89 chr2 15058546 15058669 -238197914 + MLT1K LTR MaLR 289 401 -187 1915 148 45 35 chr2 15059241 15059618 -238196965 + L1MB2 LINE L1 5779 6159 -12 336 102 0 0 chr2 15059620 15059669 -238196914 + (CA)n Simple_repeat Simple_repeat 1 49 0 369 337 70 0 chr2 15059685 15059857 -238196726 + MIR SINE MIR 20 203 -59 323 345 57 11 chr2 15059888 15060065 -238196518 - L2 LINE L2 -504 2810 2626 213 307 151 85 chr2 15060282 15060494 -238196089 + L3 LINE CR1 1347 1572 -5 327 298 73 8 chr2 15060929 15061053 -238195530 + MIR SINE MIR 20 151 -111 335 258 0 94 chr2 15063278 15063406 -238193177 - MER5B DNA MER1_type -62 116 1 2247 94 0 3 chr2 15063634 15063933 -238192650 - AluSx SINE Alu -14 298 1 288 232 21 84 chr2 15064165 15064260 -238192323 + MIR SINE MIR 18 106 -156 217 208 63 10 chr2 15064278 15064344 -238192239 - MIR SINE MIR -109 153 84 368 253 12 0 chr2 15064831 15064914 -238191669 + MIR3 SINE MIR 90 173 -35 235 298 128 66 chr2 15066306 15066537 -238190046 - MIR SINE MIR -10 252 4 383 318 106 23 chr2 15067398 15067615 -238188968 - MIR SINE MIR -27 235 1 2177 108 10 3 chr2 15068459 15068764 -238187819 - AluSq SINE Alu -6 307 1 195 326 20 0 chr2 15068777 15068826 -238187757 + L2 LINE L2 3129 3178 -94 487 232 42 28 chr2 15069479 15069621 -238186962 + L2 LINE L2 3166 3309 -4 368 316 106 72 chr2 15071231 15071477 -238185106 - L1ME4a LINE L1 -225 5896 5660 1987 169 37 5 chr2 15071477 15071855 -238184728 + MLT1B LTR MaLR 1 390 0 368 316 106 72 chr2 15071855 15072136 -238184447 - L1ME4a LINE L1 -461 5660 5351 381 293 176 24 chr2 15072670 15072875 -238183708 + MIR SINE MIR 20 255 -7 355 265 37 22 chr2 15074161 15074297 -238182286 + L3 LINE CR1 1223 1360 -217 330 239 261 23 chr2 15074548 15074678 -238181905 + MIR SINE MIR 8 168 -94 2268 77 30 0 chr2 15074801 15075101 -238181482 - AluY SINE Alu -2 309 1 1168 232 117 20 chr2 15076104 15076295 -238180288 + L1MD2 LINE L1 5914 6085 -274 231 36 0 0 chr2 15076295 15076323 -238180260 + (CA)n Simple_repeat Simple_repeat 2 29 0 1168 232 117 20 chr2 15076323 15076403 -238180180 + L1MD2 LINE L1 6085 6156 -203 1072 151 84 36 chr2 15076403 15076628 -238179955 - MER46A DNA MER2_type 0 236 1 1168 232 117 20 chr2 15076628 15076747 -238179836 + L1MD2 LINE L1 6156 6343 -16 240 174 0 70 chr2 15078022 15078108 -238178475 + (TATATG)n Simple_repeat Simple_repeat 2 81 0 238 322 11 23 chr2 15078570 15078657 -238177926 + L2 LINE L2 3182 3267 -5 225 239 11 45 chr2 15079150 15079238 -238177345 - L1ME LINE L1 -268 5853 5769 564 186 145 7 chr2 15080500 15080645 -238175938 + MER3 DNA MER1_type 40 204 -5 195 347 194 10 chr2 15080659 15080757 -238175826 + L2 LINE L2 2909 3024 -248 282 232 62 54 chr2 15082118 15082230 -238174353 - MIR SINE MIR -54 208 96 269 310 45 18 chr2 15083420 15083576 -238173007 - MIR3 SINE MIR -46 162 1 3032 144 22 38 chr2 15084046 15084580 -238172003 - MER1A DNA MER1_type -1 526 1 209 349 74 11 chr2 15084943 15085132 -238171451 + MIR SINE MIR 31 231 -31 425 261 7 0 chr2 15085904 15086046 -238170537 + (TA)n Simple_repeat Simple_repeat 2 144 0 266 227 20 193 chr2 15086942 15087092 -238169491 + MIR SINE MIR 20 141 -67 222 118 0 0 chr2 15087214 15087248 -238169335 + (TTA)n Simple_repeat Simple_repeat 2 35 0 196 356 37 15 chr2 15088762 15088897 -238167686 + MER5A DNA MER1_type 17 154 -35 528 269 72 14 chr2 15089520 15089728 -238166855 + MIR SINE MIR 2 221 -41 22 35 0 0 chr2 15090309 15090338 -238166245 + AT_rich Low_complexity Low_complexity 1 29 0 284 262 148 49 chr2 15091388 15091510 -238165073 - MIR SINE MIR -71 191 58 1027 260 54 80 chr2 15091682 15092167 -238164416 + L2 LINE L2 2841 3312 -1 213 39 0 0 chr2 15092186 15092212 -238164371 + (TGAA)n Simple_repeat Simple_repeat 4 29 0 27 29 0 0 chr2 15092219 15092253 -238164330 + AT_rich Low_complexity Low_complexity 1 34 0 674 320 28 49 chr2 15093644 15093928 -238162655 + L1MDb LINE L1 138 415 -6128 1931 230 94 23 chr2 15093933 15094632 -238161951 + L1MDb LINE L1 1531 2279 -4261 795 251 52 21 chr2 15094636 15094963 -238161620 + L1M4 LINE L1 4080 4416 -1730 634 211 58 2 chr2 15094976 15095175 -238161408 + MSTC LTR MaLR 1 210 -186 685 151 196 22 chr2 15095176 15095355 -238161228 + L1MD2 LINE L1 5870 6079 -280 3884 165 10 14 chr2 15095355 15096069 -238160514 + MER50 LTR ERV1 1 711 -23 1406 173 14 14 chr2 15096069 15096353 -238160230 + L1MD2 LINE L1 6075 6358 -1 251 306 74 46 chr2 15097171 15097279 -238159304 + MIR SINE MIR 65 175 -87 2409 76 0 3 chr2 15098681 15098982 -238157601 + AluY SINE Alu 1 300 -11 291 344 65 19 chr2 15099532 15099686 -238156897 + MIR SINE MIR 100 260 -2 1878 157 41 3 chr2 15099733 15100027 -238156556 - AluJb SINE Alu -7 305 1 240 233 0 0 chr2 15101354 15101397 -238155186 + MIR SINE MIR 206 248 -14 2144 96 7 0 chr2 15102349 15102674 -238153909 - AluSp SINE Alu 0 327 1 382 254 94 43 chr2 15102798 15102936 -238153647 + MIR SINE MIR 40 184 -78 355 316 68 23 chr2 15103071 15103248 -238153335 + MIR SINE MIR 66 250 -12 957 209 145 59 chr2 15103558 15103683 -238152900 + L1MC4a LINE L1 6138 6251 -1557 570 71 0 0 chr2 15103683 15103767 -238152816 + (TG)n Simple_repeat Simple_repeat 1 84 0 957 209 145 59 chr2 15103767 15103813 -238152770 + L1MC4a LINE L1 6251 6292 -1516 1652 190 16 10 chr2 15103813 15104123 -238152460 + AluJo SINE Alu 1 312 0 957 209 145 59 chr2 15104123 15104356 -238152227 + L1MC4a LINE L1 6292 6578 -1230 3917 66 2 0 chr2 15104356 15104858 -238151725 + L1PA5 LINE L1 5652 6154 0 2350 120 20 32 chr2 15104894 15105445 -238151138 + L1MA2 LINE L1 3207 3749 -3816 1315 225 68 6 chr2 15105445 15105783 -238150800 + THE1B LTR MaLR 6 364 0 8673 138 38 43 chr2 15105785 15107371 -238149212 + THE1C-int LTR MaLR 3 1580 0 1628 168 85 26 chr2 15107373 15107725 -238148858 + THE1C LTR MaLR 3 375 0 3347 223 52 15 chr2 15107736 15107911 -238148672 + L1MA2 LINE L1 3769 3936 -3629 2115 122 47 39 chr2 15107911 15108272 -238148311 - THE1B LTR MaLR 0 364 1 3347 223 52 15 chr2 15108272 15109360 -238147223 + L1MA2 LINE L1 3936 5140 -2425 * 6537 134 10 2 chr2 15109356 15111113 -238145470 + L1MA2 LINE L1 5955 7723 0 368 243 114 4 chr2 15111136 15111346 -238145237 + L1MD3 LINE L1 7559 7985 0 268 349 77 0 chr2 15112034 15112229 -238144354 + L2 LINE L2 2610 2819 -495 2355 104 41 16 chr2 15112410 15112775 -238143808 + THE1C LTR MaLR 1 374 -1 500 272 66 0 chr2 15112879 15113015 -238143568 - MIR SINE MIR -51 211 67 254 354 0 0 chr2 15113044 15113123 -238143460 + L2 LINE L2 3186 3264 -8 212 371 34 34 chr2 15113401 15113490 -238143093 + MIR SINE MIR 3 91 -171 190 210 290 16 chr2 15113963 15114025 -238142558 + MIR SINE MIR 23 101 -107 212 306 97 93 chr2 15114076 15114292 -238142291 - L2 LINE L2 -94 3219 3003 * 324 333 0 18 chr2 15114283 15114397 -238142186 + MIR3 SINE MIR 93 204 -4 189 336 63 35 chr2 15115578 15115721 -238140862 - MIR3 SINE MIR -46 162 16 21 0 0 0 chr2 15117731 15117752 -238138831 + AT_rich Low_complexity Low_complexity 1 21 0 2004 119 13 23 chr2 15118261 15118564 -238138019 - AluSx SINE Alu -12 300 1 6141 64 6 73 chr2 15119158 15120129 -238136454 - SVA Other Other 0 1386 481 182 308 0 15 chr2 15121172 15121237 -238135346 + MIR SINE MIR 186 249 -13 601 307 4 57 chr2 15121731 15121975 -238134608 + MIR SINE MIR 18 248 -14 312 252 135 1 chr2 15122513 15122613 -238133970 - MIR SINE MIR -93 115 3 227 316 53 0 chr2 15123085 15123218 -238133365 + L1MC4 LINE L1 7898 8037 -5 2033 99 0 0 chr2 15123419 15123681 -238132902 + AluSc SINE Alu 35 296 -13 569 209 223 0 chr2 15125774 15125922 -238130661 + MER5A DNA MER1_type 9 189 0 354 229 82 16 chr2 15125983 15126105 -238130478 + MIR SINE MIR 107 236 -26 1762 179 39 6 chr2 15126629 15126986 -238129597 - L1MA6 LINE L1 -1877 4269 3901 * 5265 157 37 25 chr2 15126984 15128896 -238127687 + L1MA6 LINE L1 4276 6236 -64 2327 113 3 0 chr2 15128896 15129207 -238127376 + AluSx SINE Alu 1 312 0 5265 157 37 25 chr2 15129207 15129273 -238127310 + L1MA6 LINE L1 6236 6300 0 2203 120 3 3 chr2 15129336 15129645 -238126938 + AluSq SINE Alu 1 309 -4 189 0 0 0 chr2 15130230 15130251 -238126332 + (A)n Simple_repeat Simple_repeat 1 21 0 242 355 118 18 chr2 15130726 15131005 -238125578 + L2 LINE L2 2936 3242 -30 325 277 50 0 chr2 15131275 15131376 -238125207 + MIR SINE MIR 46 151 -111 405 174 91 50 chr2 15132716 15132837 -238123746 - MIR SINE MIR -7 255 130 321 313 116 45 chr2 15134721 15134945 -238121638 + MIR SINE MIR 12 251 -11 558 272 119 25 chr2 15134980 15135182 -238121401 - MIR SINE MIR -1 261 41 605 230 72 34 chr2 15135394 15135659 -238120924 + L1MC5 LINE L1 7611 7885 -76 181 197 0 99 chr2 15135681 15135752 -238120831 - MIR SINE MIR -82 180 117 1653 128 135 4 chr2 15136118 15136392 -238120191 + AluJb SINE Alu 1 310 -2 37 81 0 0 chr2 15136433 15136519 -238120064 + AT_rich Low_complexity Low_complexity 1 86 0 1186 95 0 24 chr2 15137397 15137608 -238118975 - AluSg/x SINE Alu 0 333 125 2359 76 0 7 chr2 15137608 15137911 -238118672 - AluSg SINE Alu -9 301 1 386 356 53 22 chr2 15138828 15139148 -238117435 + L1ME4a LINE L1 5630 5959 -162 255 61 0 0 chr2 15139206 15139239 -238117344 + (TG)n Simple_repeat Simple_repeat 2 34 0 212 161 0 18 chr2 15139239 15139257 -238117326 + (TA)n Simple_repeat Simple_repeat 1 18 -37 1165 162 83 5 chr2 15139257 15139473 -238117110 - MER46A DNA MER2_type -3 233 1 212 161 0 18 chr2 15139473 15139510 -238117073 + (TA)n Simple_repeat Simple_repeat 18 55 0 183 80 0 0 chr2 15139526 15139551 -238117032 + (CATATA)n Simple_repeat Simple_repeat 6 30 0 21 36 0 0 chr2 15139729 15139757 -238116826 + AT_rich Low_complexity Low_complexity 1 28 0 2020 81 0 50 chr2 15140175 15140472 -238116111 + AluY SINE Alu 19 300 -11 239 339 39 31 chr2 15140768 15140895 -238115688 - MIR SINE MIR -60 148 21 446 301 142 19 chr2 15141313 15141522 -238115061 + MIR SINE MIR 10 248 -14 198 323 48 16 chr2 15141651 15141775 -238114808 + L2 LINE L2 2776 2903 -411 690 201 14 0 chr2 15142849 15142988 -238113595 + L2 LINE L2 2501 2641 -673 392 297 117 34 chr2 15143039 15143278 -238113305 + MLT1J1 LTR MaLR 65 323 -123 572 266 123 30 chr2 15144925 15145343 -238111240 + L2 LINE L2 2677 3128 -185 205 327 18 0 chr2 15145373 15145428 -238111155 + L2 LINE L2 3230 3285 -28 564 77 0 0 chr2 15145436 15145514 -238111069 + (TGGA)n Simple_repeat Simple_repeat 1 78 0 685 253 10 21 chr2 15145625 15145819 -238110764 - MER58C DNA MER1_type -23 192 1 387 374 37 41 chr2 15146048 15146294 -238110289 + L2 LINE L2 3027 3271 -1 350 283 68 118 chr2 15146587 15146969 -238109614 - L2 LINE L2 -1 3271 2909 406 151 0 0 chr2 15146988 15147061 -238109522 - MER41B LTR ERV1 -1 634 562 2567 116 50 0 chr2 15147061 15147500 -238109083 + L1PA7 LINE L1 1976 2436 -3710 303 163 0 0 chr2 15147517 15147597 -238108986 + (TA)n Simple_repeat Simple_repeat 1 80 0 20594 77 8 0 chr2 15147635 15151306 -238105277 + L1PA7 LINE L1 2480 6154 0 3108 101 30 0 chr2 15151317 15151782 -238104801 - MER41A LTR ERV1 -75 479 1 2399 87 3 0 chr2 15152054 15152365 -238104218 + AluSp SINE Alu 2 313 0 471 341 82 39 chr2 15152600 15152905 -238103678 - L2 LINE L2 -14 3258 2941 944 240 93 20 chr2 15153329 15153629 -238102954 + Charlie2 DNA MER1_type 1 322 -2540 2967 158 128 11 chr2 15153645 15154278 -238102305 + LTR8A LTR ERV1 2 708 -19 245 179 0 36 chr2 15154311 15154367 -238102216 + Charlie2 DNA MER1_type 1878 1931 -931 7517 184 31 12 chr2 15154398 15154740 -238101843 - L1PB1 LINE L1 -9 6142 5808 207 0 0 0 chr2 15154740 15154763 -238101820 + (TG)n Simple_repeat Simple_repeat 1 23 0 7517 184 31 12 chr2 15154763 15156130 -238100453 - L1PB1 LINE L1 -343 5808 4354 180 0 0 0 chr2 15156130 15156150 -238100433 + (TTA)n Simple_repeat Simple_repeat 2 21 0 7517 184 31 12 chr2 15156150 15157226 -238099357 - L1PB1 LINE L1 -1797 4354 3301 1915 127 22 0 chr2 15157233 15157509 -238099074 - AluSx SINE Alu -10 302 21 1209 216 60 24 chr2 15157509 15157879 -238098704 + Charlie2 DNA MER1_type 1916 2298 -564 4519 59 26 17 chr2 15157890 15158918 -238097665 + MER11A LTR ERVK 1 1266 0 238 250 168 53 chr2 15158918 15159118 -238097465 + Charlie2 DNA MER1_type 2308 2531 -331 1393 207 90 18 chr2 15159118 15159600 -238096983 + MER67B LTR ERV1 1 418 -243 436 233 38 18 chr2 15159571 15159802 -238096781 + MER67A LTR ERV1 273 543 0 * 522 189 161 23 chr2 15159824 15160041 -238096542 + Charlie2 DNA MER1_type 2555 2801 -61 291 330 45 27 chr2 15160109 15160221 -238096362 + MER5A DNA MER1_type 7 120 -69 279 116 0 0 chr2 15160578 15160621 -238095962 + MER112 DNA MER1_type 1 43 -217 407 298 61 17 chr2 15162092 15162273 -238094310 + MLT1K LTR MaLR 383 571 -17 181 331 169 0 chr2 15162317 15162441 -238094142 - MIR3 SINE MIR -62 146 2 835 181 0 0 chr2 15162988 15163121 -238093462 - AluJb SINE Alu -23 289 157 724 152 0 0 chr2 15163123 15163228 -238093355 - AluSq/x SINE Alu -206 107 3 225 355 59 33 chr2 15163232 15163384 -238093199 + L2 LINE L2 2688 2843 -471 350 337 84 17 chr2 15164449 15164627 -238091956 + MIR SINE MIR 12 201 -61 1940 121 95 14 chr2 15165776 15166123 -238090460 + THE1C LTR MaLR 1 375 0 388 241 0 46 chr2 15166197 15166305 -238090278 + L2 LINE L2 1245 1347 -1967 250 329 24 0 chr2 15166305 15166390 -238090193 + L2 LINE L2 1499 1585 -1729 26 0 0 0 chr2 15166408 15166434 -238090149 + AT_rich Low_complexity Low_complexity 1 26 0 681 321 60 0 chr2 15166505 15166757 -238089826 + L2 LINE L2 2069 2335 -979 414 89 89 54 chr2 15166759 15166871 -238089712 - L1MD3 LINE L1 -1 7994 7879 223 369 83 0 chr2 15167042 15167126 -238089457 + L2 LINE L2 3145 3235 -37 22 0 0 0 chr2 15167537 15167559 -238089024 + AT_rich Low_complexity Low_complexity 1 22 0 514 236 208 5 chr2 15168209 15168425 -238088158 + Charlie5 DNA MER1_type 2364 2623 0 23 0 0 0 chr2 15169171 15169194 -238087389 + AT_rich Low_complexity Low_complexity 1 23 0 3664 175 64 9 chr2 15169275 15170012 -238086571 + Charlie1 DNA MER1_type 1851 2643 -118 1905 118 56 7 chr2 15170012 15170299 -238086284 - AluSc SINE Alu -8 301 1 3664 175 64 9 chr2 15170299 15170419 -238086164 + Charlie1 DNA MER1_type 2643 2755 -6 354 285 181 7 chr2 15173314 15173458 -238083125 + MIR SINE MIR 1 169 -93 226 301 12 48 chr2 15173522 15173605 -238082978 - MIR SINE MIR -175 87 8 2194 91 7 24 chr2 15173630 15173928 -238082655 + AluY SINE Alu 1 293 -18 2067 128 0 55 chr2 15174592 15174919 -238081664 - AluSx SINE Alu -3 309 1 328 283 19 19 chr2 15175808 15175924 -238080659 + MIR SINE MIR 40 154 -70 467 374 28 0 chr2 15176404 15176583 -238080000 + MIR3 SINE MIR 16 199 -9 268 397 11 35 chr2 15178238 15178412 -238078171 + L2 LINE L2 3096 3265 -7 207 289 0 0 chr2 15178439 15178484 -238078099 - L2 LINE L2 -23 3249 3205 185 309 18 0 chr2 15179092 15179147 -238077436 - MIR SINE MIR -64 144 89 233 216 10 69 chr2 15180167 15180269 -238076314 + GA-rich Low_complexity Low_complexity 3 98 0 323 220 212 0 chr2 15180314 15180432 -238076151 - MIR SINE MIR -64 198 56 285 330 113 22 chr2 15181367 15181552 -238075031 - MIR SINE MIR 0 262 61 522 277 181 70 chr2 15182623 15183016 -238073567 + L2 LINE L2 2839 3269 -3 2570 98 13 16 chr2 15183138 15183514 -238073069 + THE1C LTR MaLR 1 375 0 305 327 102 29 chr2 15183524 15183729 -238072854 - MIR SINE MIR -38 224 5 328 349 8 23 chr2 15184156 15184285 -238072298 - MIR SINE MIR -111 151 25 920 330 63 67 chr2 15185099 15185493 -238071090 + L2 LINE L2 1947 2341 -931 2162 109 0 23 chr2 15185493 15185796 -238070787 - AluSx SINE Alu -16 296 1 920 330 63 67 chr2 15185796 15186735 -238069848 + L2 LINE L2 2341 3272 0 720 166 41 59 chr2 15187240 15187409 -238069174 + MER20 DNA MER1_type 1 166 -53 322 333 105 18 chr2 15188005 15188176 -238068407 - L2 LINE L2 -2 3270 3085 472 216 60 65 chr2 15188675 15188860 -238067723 - MER58C DNA MER1_type 0 215 32 1419 198 38 42 chr2 15188901 15189015 -238067568 - AluJo SINE Alu 0 312 199 183 80 0 0 chr2 15189015 15189040 -238067543 + (CCCA)n Simple_repeat Simple_repeat 2 26 0 1419 198 38 42 chr2 15189040 15189238 -238067345 - AluJo SINE Alu -113 199 1 2130 129 7 3 chr2 15189552 15189855 -238066728 + AluSc SINE Alu 1 304 -5 474 154 46 0 chr2 15189855 15189985 -238066598 + GA-rich Low_complexity Low_complexity 2 137 0 305 312 214 0 chr2 15190432 15190586 -238065997 + MIR3 SINE MIR 19 205 -3 707 267 42 33 chr2 15191028 15191268 -238065315 + MIR SINE MIR 14 255 -7 1890 134 0 50 chr2 15191819 15192117 -238064466 - AluSx SINE Alu -25 287 5 347 356 141 20 chr2 15193869 15194175 -238062408 - L2 LINE L2 -1 3271 2929 433 299 66 6 chr2 15195255 15195422 -238061161 + MIR SINE MIR 73 249 -13 247 333 111 21 chr2 15195620 15195764 -238060819 + MIR SINE MIR 26 182 -80 219 333 83 0 chr2 15195981 15196065 -238060518 + MIR3 SINE MIR 104 194 -14 1717 142 60 11 chr2 15196093 15196390 -238060193 + AluSx SINE Alu 1 310 0 1370 159 4 37 chr2 15196432 15196709 -238059874 + AluJo SINE Alu 48 316 0 253 309 114 57 chr2 15196925 15197100 -238059483 - MIR SINE MIR -59 203 19 1840 148 143 13 chr2 15197191 15197570 -238059013 + MSTA LTR MaLR 1 428 0 231 61 0 0 chr2 15197693 15197726 -238058857 + (TG)n Simple_repeat Simple_repeat 2 34 0 755 160 0 30 chr2 15197895 15198026 -238058557 + FLAM_C SINE Alu 1 127 -16 554 151 123 84 chr2 15201226 15201405 -238055178 - MER21A LTR ERV1 0 931 746 277 267 12 12 chr2 15201403 15201489 -238055094 - MLT2A2 LTR ERVL -175 278 193 * 187 317 0 87 chr2 15201538 15201642 -238054941 - L2 LINE L2 -164 3108 3014 261 365 33 43 chr2 15201766 15201977 -238054606 - L2 LINE L2 -556 2758 2550 2040 171 35 29 chr2 15202493 15203044 -238053539 + MLT2A2 LTR ERVL 1 554 0 1963 146 58 22 chr2 15203904 15204266 -238052317 + THE1C LTR MaLR 1 375 0 2668 129 21 5 chr2 15204266 15204748 -238051835 + THE1C-int LTR MaLR 1 486 -1150 1300 102 5 15 chr2 15204757 15204954 -238051629 + THE1C-int LTR MaLR 1386 1580 0 1833 134 62 56 chr2 15204954 15205286 -238051297 + THE1C LTR MaLR 1 337 -38 2299 91 20 0 chr2 15205286 15205583 -238051000 - AluSq SINE Alu -10 303 1 1833 134 62 56 chr2 15205583 15205623 -238050960 + THE1C LTR MaLR 337 375 0 2080 24 0 0 chr2 15208478 15208728 -238047855 - L1P LINE L1 -1976 4170 3921 1186 0 0 0 chr2 15208728 15208890 -238047693 + L1PA3 LINE L1 6014 6176 0 516 254 90 25 chr2 15210503 15210747 -238045836 + MER74B LTR ERVL 363 622 0 1001 172 78 16 chr2 15210892 15211148 -238045435 - MER46C DNA MER2_type -39 299 28 1488 210 7 23 chr2 15212103 15212413 -238044170 - AluJo SINE Alu -7 305 1 25 75 0 0 chr2 15213090 15213143 -238043440 + AT_rich Low_complexity Low_complexity 1 53 0 363 250 19 28 chr2 15213389 15213497 -238043086 - L1MC/D LINE L1 -2124 5684 5578 582 244 54 66 chr2 15213842 15213908 -238042675 + L1ME LINE L1 39 104 -5966 1936 151 0 22 chr2 15213908 15214227 -238042356 + AluSx SINE Alu 1 312 0 582 244 54 66 chr2 15214227 15214418 -238042165 + L1ME LINE L1 104 293 -5777 1359 228 84 39 chr2 15214453 15214988 -238041595 + L1ME2 LINE L1 5579 6137 -27 25 0 0 0 chr2 15215934 15215959 -238040624 + AT_rich Low_complexity Low_complexity 1 25 0 33504 86 7 10 chr2 15216091 15222268 -238034315 + L1PA6 LINE L1 11 6154 0 21 36 0 0 chr2 15222799 15222827 -238033756 + AT_rich Low_complexity Low_complexity 1 28 0 1377 181 4 20 chr2 15223421 15223718 -238032865 + AluJo SINE Alu 37 329 0 191 349 0 0 chr2 15223781 15223844 -238032739 - MER5B DNA MER1_type -113 65 3 204 269 0 0 chr2 15223999 15224051 -238032532 - MIR SINE MIR -111 151 100 374 324 79 79 chr2 15224242 15224560 -238032023 + L2 LINE L2 2925 3242 -30 2082 148 14 6 chr2 15225015 15225366 -238031217 - Tigger1 DNA MER2_type 0 2418 2065 * 5172 129 22 4 chr2 15225347 15226176 -238030407 - Tigger1 DNA MER2_type -1571 847 4 337 283 128 41 chr2 15226838 15227057 -238029526 + MLT1J LTR MaLR 102 339 -172 251 313 0 20 chr2 15228151 15228250 -238028333 + GA-rich Low_complexity Low_complexity 4 100 0 999 296 152 17 chr2 15229105 15229900 -238026683 + L2 LINE L2 2402 3313 0 24 32 0 0 chr2 15230964 15230995 -238025588 + AT_rich Low_complexity Low_complexity 1 31 0 2266 234 16 45 chr2 15231588 15232233 -238024350 + MLT1E2 LTR MaLR 1 626 0 21 107 0 0 chr2 15232447 15232531 -238024052 + AT_rich Low_complexity Low_complexity 1 84 0 293 327 201 28 chr2 15233154 15233408 -238023175 - L2 LINE L2 -452 2862 2565 406 266 85 40 chr2 15233817 15233994 -238022589 - MIR SINE MIR -1 261 77 2419 74 3 0 chr2 15234022 15234319 -238022264 - AluY SINE Alu -8 303 6 349 327 31 19 chr2 15234430 15234589 -238021994 - L1ME4a LINE L1 0 6121 5961 840 215 54 0 chr2 15234659 15234864 -238021719 - L1ME3A LINE L1 -85 6085 5870 709 158 0 24 chr2 15234908 15235035 -238021548 + FLAM_C SINE Alu 18 141 -2 1558 244 78 10 chr2 15235044 15235729 -238020854 - L1ME3A LINE L1 -355 5815 5086 1047 179 28 32 chr2 15235730 15235948 -238020635 + AluJo SINE Alu 85 301 -11 222 301 68 29 chr2 15236078 15236181 -238020402 + L2 LINE L2 3146 3252 -61 2003 131 7 0 chr2 15236288 15236579 -238020004 + AluSg SINE Alu 1 293 -17 746 195 0 0 chr2 15236834 15236962 -238019621 + AluJo SINE Alu 7 134 -178 33 56 0 0 chr2 15236964 15237018 -238019565 + AT_rich Low_complexity Low_complexity 1 54 0 650 200 131 0 chr2 15237018 15237127 -238019456 + AluJo SINE Alu 144 278 -34 1222 88 0 6 chr2 15237127 15237298 -238019285 + L1PB1 LINE L1 5980 6149 -2 650 200 131 0 chr2 15237298 15237333 -238019250 + AluJo SINE Alu 278 307 -5 405 39 0 0 chr2 15238497 15238548 -238018035 + (CA)n Simple_repeat Simple_repeat 2 52 0 1783 163 0 17 chr2 15238564 15238858 -238017725 + AluJo SINE Alu 1 289 -23 253 378 51 10 chr2 15239090 15239188 -238017395 - L2 LINE L2 -30 3242 3141 2451 267 88 77 chr2 15239328 15240818 -238015765 - L2 LINE L2 0 3313 1812 1844 176 0 14 chr2 15240940 15241276 -238015307 + AluSx SINE Alu 1 312 0 25 0 0 0 chr2 15241429 15241454 -238015129 + AT_rich Low_complexity Low_complexity 1 25 0 281 262 58 58 chr2 15242011 15242120 -238014463 + L1ME4a LINE L1 5672 5780 -341 247 75 0 38 chr2 15242120 15242173 -238014410 + (TAAA)n Simple_repeat Simple_repeat 3 53 0 281 262 58 58 chr2 15242173 15242338 -238014245 + L1ME4a LINE L1 5779 5946 -175 32 43 0 0 chr2 15242511 15242557 -238014026 + AT_rich Low_complexity Low_complexity 1 46 0 228 224 17 0 chr2 15243441 15243499 -238013084 - L1ME3A LINE L1 -1158 4988 4930 1354 190 42 98 chr2 15243562 15244088 -238012495 + L1M4 LINE L1 5009 5463 -721 13694 110 9 3 chr2 15244088 15246969 -238009614 + L1PA8A LINE L1 3230 6122 -9 1354 190 42 98 chr2 15246969 15247269 -238009314 + L1M4 LINE L1 5463 5778 -406 226 222 0 0 chr2 15249419 15249473 -238007110 + MER3 DNA MER1_type 37 90 -119 * 399 125 0 0 chr2 15249436 15249508 -238007075 - MER3 DNA MER1_type -6 203 132 846 159 30 0 chr2 15249508 15249640 -238006943 + AluSq/x SINE Alu 1 136 -176 580 247 7 27 chr2 15249640 15249790 -238006793 - MER3 DNA MER1_type -62 147 1 25 0 0 0 chr2 15249926 15249951 -238006632 + AT_rich Low_complexity Low_complexity 1 25 0 886 279 57 84 chr2 15250510 15251231 -238005352 + L1ME3A LINE L1 5293 6005 -165 1931 135 14 3 chr2 15251231 15251520 -238005063 + AluSx SINE Alu 1 292 -20 886 279 57 84 chr2 15251520 15251667 -238004916 + L1ME3A LINE L1 6005 6155 -15 306 0 0 0 chr2 15251707 15251741 -238004842 + (CA)n Simple_repeat Simple_repeat 1 34 0 3378 179 20 10 chr2 15252148 15252845 -238003738 - MER50 LTR ERV1 -23 711 8 207 234 21 0 chr2 15253957 15254004 -238002579 + MIR SINE MIR 144 191 -71 2029 190 69 9 chr2 15254521 15254958 -238001625 + MER31B LTR ERV1 4 466 0 234 0 0 0 chr2 15255156 15255182 -238001401 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2288 148 59 5 chr2 15255347 15255753 -238000830 + MSTA LTR MaLR 1 428 0 21 0 0 0 chr2 15255805 15255826 -238000757 + AT_rich Low_complexity Low_complexity 1 21 0 852 192 36 60 chr2 15256723 15257025 -237999558 + MER31A LTR ERV1 1 295 -190 774 159 62 11 chr2 15257110 15257286 -237999297 + MER93b LTR ERV1 189 373 0 389 109 0 0 chr2 15257286 15257341 -237999242 + MER31A LTR ERV1 360 414 -71 501 112 31 71 chr2 15257363 15257461 -237999122 - AluJb SINE Alu -179 133 40 2281 167 37 90 chr2 15257620 15258219 -237998364 + LTR35 LTR ERV1 1 567 -51 225 226 0 0 chr2 15258219 15258272 -237998311 + (TG)n Simple_repeat Simple_repeat 1 53 0 1613 214 0 0 chr2 15258286 15258580 -237998003 - AluJo SINE Alu -18 294 1 28 71 0 0 chr2 15259393 15259449 -237997134 + AT_rich Low_complexity Low_complexity 1 56 0 235 283 151 28 chr2 15259561 15259667 -237996916 + L2 LINE L2 3175 3293 -20 2804 137 28 8 chr2 15259670 15260166 -237996417 - Tigger3b DNA MER2_type 0 1231 726 1379 216 0 51 chr2 15260189 15260485 -237996098 - AluJo SINE Alu -31 281 1 2447 148 81 6 chr2 15260496 15261015 -237995568 - Tigger3b DNA MER2_type -656 575 18 2227 122 0 0 chr2 15261066 15261369 -237995214 + AluSx SINE Alu 1 303 -9 21 0 0 0 chr2 15261502 15261523 -237995060 + AT_rich Low_complexity Low_complexity 1 21 0 2376 101 0 16 chr2 15261532 15261850 -237994733 + AluSp SINE Alu 1 313 0 1621 154 0 93 chr2 15262031 15262355 -237994228 + AluJo SINE Alu 1 294 -8 499 225 141 31 chr2 15262578 15262769 -237993814 + MLT2C1 LTR ERVL 13 224 -173 853 139 0 53 chr2 15262776 15262927 -237993656 + FLAM_C SINE Alu 1 143 0 234 273 8 61 chr2 15263020 15263152 -237993431 + MLT2C1 LTR ERVL 336 460 -4 1501 193 30 10 chr2 15263668 15263969 -237992614 + MLT1F1 LTR MaLR 85 391 -176 377 289 65 107 chr2 15263964 15264086 -237992497 + MLT1G LTR MaLR 52 178 -377 * 2282 94 7 0 chr2 15264086 15264383 -237992200 + AluSp SINE Alu 1 299 -14 377 289 65 107 chr2 15264383 15264786 -237991797 + MLT1G LTR MaLR 178 555 0 288 281 161 45 chr2 15265230 15265409 -237991174 - MIR SINE MIR -51 211 14 291 290 113 61 chr2 15265753 15265984 -237990599 + MIR SINE MIR 14 256 -6 337 113 62 1 chr2 15266227 15266311 -237990272 + Alu SINE Alu 242 290 -12 549 216 134 47 chr2 15267286 15267457 -237989126 - MIR SINE MIR -29 233 48 269 261 23 11 chr2 15267647 15267735 -237988848 - L1MC4 LINE L1 -14 8028 7940 280 227 9 18 chr2 15267809 15267919 -237988664 + (CATATA)n Simple_repeat Simple_repeat 2 110 0 512 189 0 0 chr2 15267923 15268018 -237988565 - L1MC4 LINE L1 -126 7916 7822 2372 101 0 0 chr2 15268027 15268333 -237988250 - AluSg SINE Alu -4 306 1 356 294 39 20 chr2 15268554 15268707 -237987876 + MLT1I LTR MaLR 93 248 -161 186 133 0 0 chr2 15269642 15269672 -237986911 + (CA)n Simple_repeat Simple_repeat 2 31 0 654 205 25 56 chr2 15269973 15270134 -237986449 + MIR SINE MIR 17 172 -90 1660 156 7 18 chr2 15270144 15270426 -237986157 - AluJb SINE Alu -27 285 7 2775 89 18 8 chr2 15270426 15270819 -237985764 + THE1C-int LTR MaLR 1184 1580 0 1795 151 51 38 chr2 15270819 15271189 -237985394 + THE1C LTR MaLR 1 375 0 232 250 200 0 chr2 15271192 15271272 -237985311 + MIR SINE MIR 163 258 -4 247 316 113 38 chr2 15271349 15271482 -237985101 - MIR SINE MIR -81 181 39 446 236 161 35 chr2 15271763 15271937 -237984646 - MIR SINE MIR -1 261 66 1758 185 0 0 chr2 15273180 15273466 -237983117 - AluJb SINE Alu -26 286 1 21 0 0 0 chr2 15274227 15274248 -237982335 + AT_rich Low_complexity Low_complexity 1 21 0 368 275 47 62 chr2 15274629 15274822 -237981761 - MIR SINE MIR -5 257 68 350 323 116 12 chr2 15275536 15275787 -237980796 + L1MC4a LINE L1 5633 5909 -1899 434 304 111 37 chr2 15276755 15277133 -237979450 + L1MB5 LINE L1 4976 5381 -765 250 239 0 0 chr2 15277223 15277269 -237979314 + L1MB5 LINE L1 5589 5634 -2174 722 239 86 14 chr2 15277287 15277496 -237979087 - MIR SINE MIR -37 225 2 2258 140 0 19 chr2 15278287 15278659 -237977924 - MER47A DNA MER2_type -1 365 1 25 31 0 0 chr2 15278772 15278804 -237977779 + AT_rich Low_complexity Low_complexity 1 32 0 643 151 0 0 chr2 15279774 15279880 -237976703 + L1MB5 LINE L1 6069 6174 0 21 36 0 0 chr2 15279928 15279956 -237976627 + AT_rich Low_complexity Low_complexity 1 28 0 727 137 7 72 chr2 15280062 15280215 -237976368 - FLAM_C SINE Alu 0 143 1 28 86 0 0 chr2 15280341 15280411 -237976172 + AT_rich Low_complexity Low_complexity 1 70 0 28 0 0 0 chr2 15281161 15281189 -237975394 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr2 15281319 15281349 -237975234 + AT_rich Low_complexity Low_complexity 1 30 0 309 344 120 32 chr2 15282119 15282722 -237973861 - L2 LINE L2 -3 3269 2596 21 36 0 0 chr2 15283001 15283029 -237973554 + AT_rich Low_complexity Low_complexity 1 28 0 245 305 11 74 chr2 15284076 15284171 -237972412 + MIR SINE MIR 51 139 -69 204 385 33 11 chr2 15286082 15286173 -237970410 - L2 LINE L2 -187 3085 2993 233 306 93 0 chr2 15286408 15286516 -237970067 + L2 LINE L2 2219 2336 -978 237 119 68 34 chr2 15286582 15286641 -237969942 - L1M LINE L1 -800 5378 5318 2056 82 45 0 chr2 15286919 15287186 -237969397 - AluY SINE Alu -16 295 17 1804 159 0 10 chr2 15287474 15287770 -237968813 - AluJb SINE Alu -19 293 1 636 253 73 4 chr2 15287894 15288127 -237968456 - L1M4 LINE L1 -1538 4608 4360 1981 237 16 20 chr2 15288237 15288786 -237967797 + L1ME3A LINE L1 5416 5962 -208 608 263 17 17 chr2 15289030 15289205 -237967378 + LTR16C LTR ERVL 287 461 -30 243 263 0 62 chr2 15289226 15289306 -237967277 + L1ME3A LINE L1 6041 6115 -55 200 238 0 24 chr2 15289339 15289381 -237967202 - MIR SINE MIR -137 71 31 258 223 233 0 chr2 15289478 15289581 -237967002 + L1ME1 LINE L1 53 179 -6217 529 125 0 0 chr2 15289593 15289673 -237966910 - AluJ/FRAM SINE Alu -11 301 222 1106 278 147 8 chr2 15289673 15290163 -237966420 + L1ME1 LINE L1 191 748 -5648 * 1356 250 32 22 chr2 15290160 15290564 -237966019 + L1MA9 LINE L1 5867 6274 -38 1305 254 65 80 chr2 15290583 15290668 -237965915 + L1ME1 LINE L1 738 823 -5573 2232 87 14 3 chr2 15290668 15290957 -237965626 + AluSg SINE Alu 1 292 -18 1305 254 65 80 chr2 15290957 15292112 -237964471 + L1ME1 LINE L1 823 1960 -4436 1821 226 73 35 chr2 15292179 15293925 -237962658 + L1ME1 LINE L1 4282 6095 -140 1479 282 20 56 chr2 15293298 15293997 -237962586 + L1MB8 LINE L1 5574 6247 0 * 24 0 0 0 chr2 15294007 15294031 -237962552 + AT_rich Low_complexity Low_complexity 1 24 0 26 50 0 0 chr2 15295629 15295669 -237960914 + AT_rich Low_complexity Low_complexity 1 40 0 357 274 335 6 chr2 15295885 15296064 -237960519 - MIR SINE MIR -6 256 19 25 0 0 0 chr2 15297178 15297203 -237959380 + AT_rich Low_complexity Low_complexity 1 25 0 198 71 0 0 chr2 15297926 15297954 -237958629 + (TG)n Simple_repeat Simple_repeat 2 29 0 1591 160 52 4 chr2 15297956 15298266 -237958317 - AluJo SINE Alu 0 323 1 1026 268 208 34 chr2 15299461 15300473 -237956110 + HAL1 LINE L1 1243 2430 -77 330 221 19 91 chr2 15300579 15300733 -237955850 - L1MC4 LINE L1 -408 7634 7492 326 296 31 0 chr2 15300712 15300810 -237955773 - L1MC5 LINE L1 -548 7413 7313 * 492 291 93 32 chr2 15300796 15301109 -237955474 - L1MC4a LINE L1 -393 7415 7084 244 230 27 27 chr2 15301201 15301275 -237955308 + GA-rich Low_complexity Low_complexity 2 75 0 296 289 0 13 chr2 15301279 15301355 -237955228 - MIR3 SINE MIR -49 159 85 239 325 0 0 chr2 15302778 15302855 -237953728 + MIR SINE MIR 124 200 -62 1864 133 32 52 chr2 15303197 15303544 -237953039 - MER2 DNA MER2_type -1 343 4 324 0 0 0 chr2 15303700 15303736 -237952847 + (TG)n Simple_repeat Simple_repeat 2 37 0 887 144 0 0 chr2 15303744 15303876 -237952707 - FLAM_C SINE Alu -1 132 1 866 255 19 14 chr2 15303885 15304093 -237952490 - MIR SINE MIR -25 237 29 2168 122 0 6 chr2 15304336 15304648 -237951935 - AluSx SINE Alu -2 310 1 1460 273 67 34 chr2 15305559 15306956 -237949627 + L1MC/D LINE L1 4278 5734 -748 336 218 168 0 chr2 15306969 15307070 -237949513 + MER3 DNA MER1_type 92 209 0 236 250 11 33 chr2 15307420 15307512 -237949071 + L1ME LINE L1 5410 5499 -671 1961 186 110 22 chr2 15307578 15308040 -237948543 - MLT1D LTR MaLR -2 503 1 296 304 65 6 chr2 15308333 15308501 -237948082 - L1M1 LINE L1 -4528 3037 2860 472 320 110 14 chr2 15308502 15308721 -237947862 + MIR SINE MIR 2 241 -21 716 159 0 16 chr2 15308725 15308851 -237947732 + FLAM_C SINE Alu 1 124 -19 370 366 41 5 chr2 15308911 15309105 -237947478 - L1MEc LINE L1 -4797 1513 1313 1000 295 101 69 chr2 15309138 15310024 -237946559 - L1MEc LINE L1 -4893 1226 313 418 326 40 43 chr2 15311069 15311345 -237945238 - L1MEc LINE L1 -5831 288 14 181 374 44 0 chr2 15311563 15311654 -237944929 - MER5A DNA MER1_type -24 165 71 1017 301 69 6 chr2 15312006 15312368 -237944215 + MLT1I LTR MaLR 25 409 0 1844 209 28 43 chr2 15312541 15313073 -237943510 + MER65B LTR ERV1 1 524 -7 384 376 110 19 chr2 15313098 15313417 -237943166 - L2 LINE L2 0 3272 2925 186 396 38 0 chr2 15313477 15313636 -237942947 - L2 LINE L2 -463 2851 2687 285 297 92 46 chr2 15314164 15314359 -237942224 - L3 LINE CR1 -10 1567 1364 2369 86 0 0 chr2 15314498 15314799 -237941784 + AluSx SINE Alu 1 301 -11 624 297 36 10 chr2 15314895 15315090 -237941493 + MIR SINE MIR 8 207 -55 216 0 0 0 chr2 15315921 15315945 -237940638 + (GA)n Simple_repeat Simple_repeat 2 25 0 2266 101 0 7 chr2 15316357 15316665 -237939918 + AluSx SINE Alu 1 306 -6 207 230 0 150 chr2 15317953 15318053 -237938530 + L2 LINE L2 3223 3307 -6 265 299 133 77 chr2 15318268 15318673 -237937910 - L2 LINE L2 -14 3258 2831 225 0 0 0 chr2 15319171 15319196 -237937387 + (TG)n Simple_repeat Simple_repeat 2 26 0 246 81 0 0 chr2 15319225 15319262 -237937321 + (TG)n Simple_repeat Simple_repeat 2 38 0 774 214 7 7 chr2 15319263 15319417 -237937166 - FAM SINE Alu -17 158 5 2260 107 0 3 chr2 15319547 15319847 -237936736 - AluY SINE Alu -12 299 1 2853 159 56 16 chr2 15321654 15322226 -237934357 - L1MC1 LINE L1 -6 6327 5733 603 176 114 0 chr2 15322231 15322362 -237934221 + L1MC2 LINE L1 6189 6334 -10 225 231 119 90 chr2 15322930 15323064 -237933519 + MIR3 SINE MIR 41 178 -30 34 0 0 0 chr2 15323307 15323341 -237933242 + AT_rich Low_complexity Low_complexity 1 34 0 236 393 8 33 chr2 15323538 15323660 -237932923 - MIR3 SINE MIR -75 133 15 208 239 0 0 chr2 15324367 15324413 -237932170 + (CAGAGA)n Simple_repeat Simple_repeat 3 48 0 272 292 35 35 chr2 15324591 15324735 -237931848 + MER5B DNA MER1_type 29 172 -6 197 281 171 91 chr2 15325123 15325333 -237931250 + MIR SINE MIR 19 245 -17 181 305 76 47 chr2 15325638 15325874 -237930709 + L2 LINE L2 1935 2177 -1137 532 320 75 9 chr2 15325952 15326180 -237930403 - HAL1 LINE L1 -880 1627 1385 580 275 101 27 chr2 15326190 15326637 -237929946 - HAL1 LINE L1 -1173 1334 855 359 294 122 20 chr2 15326639 15326884 -237929699 - HAL1 LINE L1 -1708 799 530 915 172 43 48 chr2 15327989 15328198 -237928385 + MER3 DNA MER1_type 2 209 0 1277 188 0 52 chr2 15328283 15328533 -237928050 + AluJo SINE Alu 1 237 -75 2167 114 17 0 chr2 15328597 15328894 -237927689 + AluY SINE Alu 1 302 -9 258 243 43 0 chr2 15329020 15329090 -237927493 + MIR3 SINE MIR 133 205 -3 188 324 0 15 chr2 15329324 15329392 -237927191 - L2 LINE L2 -526 2788 2722 204 125 0 0 chr2 15330197 15330229 -237926354 + (ATG)n Simple_repeat Simple_repeat 2 33 0 620 299 60 20 chr2 15330280 15330531 -237926052 - MIR SINE MIR 0 262 2 1976 138 7 7 chr2 15330644 15330942 -237925641 - AluSx SINE Alu -14 298 1 422 328 15 8 chr2 15331279 15331410 -237925173 + L2 LINE L2 3182 3313 0 760 284 34 21 chr2 15332997 15333233 -237923350 + MIR SINE MIR 10 248 -14 1356 157 12 94 chr2 15333650 15333969 -237922614 + AluJo SINE Alu 1 293 -19 203 206 49 39 chr2 15334048 15334150 -237922433 + (CAAGA)n Simple_repeat Simple_repeat 5 107 0 815 228 86 39 chr2 15335245 15335477 -237921106 - MIR SINE MIR -10 252 10 252 276 14 145 chr2 15336516 15336661 -237919922 + L2 LINE L2 3040 3165 -107 219 296 0 28 chr2 15336732 15336803 -237919780 + (TGGA)n Simple_repeat Simple_repeat 4 72 0 540 234 24 0 chr2 15337038 15337162 -237919421 + FLAM_A SINE Alu 1 127 -6 21 0 0 0 chr2 15337588 15337609 -237918974 + AT_rich Low_complexity Low_complexity 1 21 0 1503 266 49 67 chr2 15338240 15338849 -237917734 + L1MEc LINE L1 11 605 -5791 2234 86 3 25 chr2 15338849 15339164 -237917419 + AluY SINE Alu 1 308 -3 1503 266 49 67 chr2 15339164 15339314 -237917269 + L1MEc LINE L1 605 756 -5640 44111 37 1 4 chr2 15339336 15345503 -237911080 + L1PA3 LINE L1 2 6154 -1 2339 247 74 43 chr2 15345528 15346869 -237909714 + L1MEc LINE L1 758 2219 -4177 302 253 21 77 chr2 15346929 15347123 -237909460 + L1MEc LINE L1 2178 2360 -4036 572 266 148 5 chr2 15347275 15347478 -237909105 + L1ME3A LINE L1 5937 6168 -2 1135 199 77 106 chr2 15347623 15347999 -237908584 - MLT1A1 LTR MaLR 0 365 1 228 227 162 3 chr2 15348242 15348323 -237908260 - MIR SINE MIR -56 152 72 32 0 0 0 chr2 15349056 15349088 -237907495 + AT_rich Low_complexity Low_complexity 1 32 0 195 306 16 16 chr2 15350220 15350282 -237906301 + L2 LINE L2 2998 3059 -213 309 109 0 0 chr2 15350860 15350906 -237905677 + (TTCA)n Simple_repeat Simple_repeat 3 48 0 1594 183 7 4 chr2 15350907 15351186 -237905397 - AluJo SINE Alu -32 280 1 1485 161 45 3 chr2 15351814 15352105 -237904478 + L1MB2 LINE L1 5855 6157 -14 2393 52 24 0 chr2 15352153 15352440 -237904143 + AluY SINE Alu 5 298 -13 2441 83 0 0 chr2 15353606 15353908 -237902675 - AluSc SINE Alu -3 306 5 558 126 27 45 chr2 15354182 15354293 -237902290 + L1MD3 LINE L1 7730 7838 -157 2342 78 10 0 chr2 15354745 15355038 -237901545 - AluSx SINE Alu -16 296 1 437 248 44 0 chr2 15355209 15355322 -237901261 + L1MD3 LINE L1 7838 7955 -40 596 243 71 12 chr2 15355413 15355582 -237901001 - MIR SINE MIR 0 262 84 431 256 34 8 chr2 15356293 15356410 -237900173 - L2 LINE L2 0 3313 3194 680 254 68 42 chr2 15356422 15356686 -237899897 - L2 LINE L2 0 3313 3043 513 286 136 14 chr2 15356700 15356980 -237899603 - L2 LINE L2 -144 3169 2856 2294 167 49 5 chr2 15358153 15358561 -237898022 + MSTB LTR MaLR 1 426 0 2186 82 53 0 chr2 15359332 15359614 -237896969 - AluY SINE Alu -14 297 1 201 287 357 6 chr2 15359731 15359888 -237896695 + MIR SINE MIR 50 261 -1 27 29 0 0 chr2 15360926 15360960 -237895623 + AT_rich Low_complexity Low_complexity 1 34 0 404 223 65 50 chr2 15362020 15362159 -237894424 - L2 LINE L2 0 3313 3173 259 270 0 139 chr2 15362299 15362414 -237894169 + L2 LINE L2 3174 3272 0 353 289 155 56 chr2 15362442 15362816 -237893767 - L2 LINE L2 -907 2407 1997 1707 192 0 3 chr2 15362826 15363118 -237893465 + AluJo SINE Alu 1 291 -21 534 319 111 28 chr2 15363119 15363589 -237892994 + L2 LINE L2 725 1233 -2081 533 236 70 79 chr2 15363595 15363938 -237892645 + L1MC5 LINE L1 7556 7895 -66 910 290 112 39 chr2 15363982 15364571 -237892012 + L2 LINE L2 1218 1849 -1465 426 274 105 26 chr2 15364753 15364906 -237891677 + MIR SINE MIR 6 170 -92 366 266 62 0 chr2 15364980 15365093 -237891490 - L2 LINE L2 -5 3308 3189 180 353 163 41 chr2 15365147 15365368 -237891215 + L2 LINE L2 3021 3268 -4 27 29 0 0 chr2 15365636 15365670 -237890913 + AT_rich Low_complexity Low_complexity 1 34 0 1886 173 3 0 chr2 15366492 15366787 -237889796 + AluJb SINE Alu 2 297 -15 2420 50 0 0 chr2 15368933 15369250 -237887333 - L1P LINE L1 -2891 3255 2939 4680 54 0 3 chr2 15369250 15369835 -237886748 + L1PA5 LINE L1 5565 6152 -2 462 271 9 0 chr2 15370281 15370388 -237886195 - L2 LINE L2 -2 3311 3204 1397 120 0 10 chr2 15370608 15370816 -237885767 + AluSq SINE Alu 96 301 -12 1351 236 52 35 chr2 15371452 15371820 -237884763 + MLT1A2 LTR MaLR 1 374 0 438 220 207 7 chr2 15371917 15372067 -237884516 + LTR41 LTR ERVL 8 187 -586 387 276 91 47 chr2 15372511 15372765 -237883818 + LTR41 LTR ERVL 503 767 -6 2075 113 3 0 chr2 15374382 15374696 -237881887 - AluSx SINE Alu 0 315 1 22 80 0 0 chr2 15375762 15375812 -237880771 + AT_rich Low_complexity Low_complexity 1 50 0 2135 114 24 0 chr2 15376276 15376574 -237880009 + AluSg SINE Alu 1 305 -5 2071 96 35 0 chr2 15377104 15377386 -237879197 - AluSx SINE Alu -19 293 2 239 139 0 0 chr2 15377623 15377666 -237878917 - L1ME4a LINE L1 -1 6120 6078 204 228 152 25 chr2 15379672 15379751 -237876832 + L2 LINE L2 3184 3272 0 1708 197 3 3 chr2 15379894 15380198 -237876385 + AluJo SINE Alu 1 304 -8 27 0 0 0 chr2 15380263 15380290 -237876293 + AT_rich Low_complexity Low_complexity 1 27 0 2586 188 12 2 chr2 15380653 15381149 -237875434 - L1MB5 LINE L1 -8 6166 5666 241 213 0 0 chr2 15381402 15381449 -237875134 + MER39 LTR ERV1 1 47 -660 2119 130 76 80 chr2 15381501 15381985 -237874598 + MER39 LTR ERV1 1 554 -153 1672 146 52 4 chr2 15381985 15382253 -237874330 - AluJb SINE Alu -31 281 1 2119 130 76 80 chr2 15382253 15382407 -237874176 + MER39 LTR ERV1 554 707 0 657 142 0 9 chr2 15382654 15382760 -237873823 + MER39 LTR ERV1 598 702 -5 262 321 160 0 chr2 15383000 15383106 -237873477 - L2 LINE L2 -2 3270 3148 861 70 86 0 chr2 15384267 15384395 -237872188 - MER85 DNA T2_type 0 139 1 21 0 0 0 chr2 15385117 15385138 -237871445 + AT_rich Low_complexity Low_complexity 1 21 0 182 345 0 18 chr2 15385371 15385426 -237871157 + MIR SINE MIR 54 107 -155 993 220 72 5 chr2 15387189 15387412 -237869171 + MER8 DNA MER2_type 2 239 0 224 295 13 0 chr2 15389308 15389386 -237867197 + GA-rich Low_complexity Low_complexity 2 80 0 379 279 74 0 chr2 15389788 15389910 -237866673 + Charlie8 DNA MER1_type 136 266 -2151 301 254 0 0 chr2 15389991 15390054 -237866529 + Charlie8 DNA MER1_type 2343 2405 -12 275 357 39 31 chr2 15390462 15390591 -237865992 - MIR3 SINE MIR -53 155 26 27 29 0 0 chr2 15390873 15390907 -237865676 + AT_rich Low_complexity Low_complexity 1 34 0 1011 225 76 86 chr2 15390919 15391290 -237865293 + MER39 LTR ERV1 1 536 -171 2539 71 0 0 chr2 15391290 15391601 -237864982 + AluY SINE Alu 1 311 0 1011 225 76 86 chr2 15391601 15391772 -237864811 + MER39 LTR ERV1 536 707 0 410 220 85 51 chr2 15391948 15392125 -237864458 - L1MC5 LINE L1 -64 7897 7715 1945 148 0 14 chr2 15392297 15392594 -237863989 - AluJb SINE Alu -17 295 3 1802 155 57 35 chr2 15392770 15393137 -237863446 + THE1C LTR MaLR 1 375 0 2075 139 3 0 chr2 15393221 15393522 -237863061 + AluSx SINE Alu 1 302 -10 2036 116 23 0 chr2 15393658 15393959 -237862624 - AluSx SINE Alu -4 308 1 335 323 32 38 chr2 15394084 15394242 -237862341 + MIR SINE MIR 57 213 -49 387 203 138 89 chr2 15395076 15395367 -237861216 + L1MC5 LINE L1 7223 7527 -434 3206 191 46 10 chr2 15395578 15395909 -237860674 + L1MB8 LINE L1 5444 5762 -416 378 91 0 0 chr2 15395909 15395964 -237860619 + (CA)n Simple_repeat Simple_repeat 2 56 0 3206 191 46 10 chr2 15395964 15396333 -237860250 + L1MB8 LINE L1 5762 6169 -9 343 216 10 10 chr2 15396413 15396515 -237860068 + GA-rich Low_complexity Low_complexity 4 105 0 885 340 135 36 chr2 15396583 15397574 -237859009 - L2 LINE L2 -29 3284 2196 24 0 0 70 chr2 15398173 15398216 -237858367 + AT_rich Low_complexity Low_complexity 1 40 0 4577 88 22 12 chr2 15398260 15398419 -237858164 + L1PA13 LINE L1 5482 5638 -525 1552 118 226 47 chr2 15398419 15398582 -237858001 + MSTA LTR MaLR 1 133 -295 192 40 0 0 chr2 15398582 15398607 -237857976 + (TC)n Simple_repeat Simple_repeat 1 25 0 1552 118 226 47 chr2 15398607 15398765 -237857818 + MSTA LTR MaLR 133 261 -167 2074 138 10 3 chr2 15398765 15399063 -237857520 - AluSx SINE Alu -12 300 1 1552 118 226 47 chr2 15399063 15399103 -237857480 + MSTA LTR MaLR 261 428 0 4577 88 22 12 chr2 15399103 15399610 -237856973 + L1PA13 LINE L1 5638 6155 -8 379 228 0 142 chr2 15400178 15400305 -237856278 - L2 LINE L2 -7 3306 3198 342 0 0 0 chr2 15400338 15400376 -237856207 + (CA)n Simple_repeat Simple_repeat 1 38 0 2255 58 51 7 chr2 15400489 15400781 -237855802 + AluY SINE Alu 1 305 -6 1958 106 73 0 chr2 15400855 15401130 -237855453 + AluY SINE Alu 1 295 -16 899 10 0 0 chr2 15401420 15401520 -237855063 - AluYa5/8 SINE Alu -7 303 204 1095 155 0 0 chr2 15401604 15401765 -237854818 - AluJb SINE Alu -18 294 134 5406 129 36 26 chr2 15402186 15403125 -237853458 - Tigger3b DNA MER2_type 0 1231 284 319 231 0 15 chr2 15403125 15403190 -237853393 - MER2 DNA MER2_type 0 345 282 * 442 287 0 0 chr2 15403165 15403259 -237853324 - MER8 DNA MER2_type -60 179 86 239 256 16 74 chr2 15403774 15403895 -237852688 - L1ME3 LINE L1 -8 6154 6041 1302 165 30 0 chr2 15404544 15404781 -237851802 + L1M4 LINE L1 5485 5728 -446 202 318 0 11 chr2 15405869 15405957 -237850626 + A-rich Low_complexity Low_complexity 4 90 0 480 285 66 41 chr2 15406097 15406490 -237850093 + HAL1b LINE L1 231 633 -715 1451 252 150 4 chr2 15406724 15407176 -237849407 - L2 LINE L2 -1405 1909 1392 196 240 0 20 chr2 15407379 15407429 -237849154 - MIR SINE MIR -55 207 159 542 179 5 122 chr2 15408359 15408555 -237848028 - L1MC4 LINE L1 -4 8038 7866 1739 103 4 0 chr2 15408557 15408791 -237847792 + AluSq SINE Alu 1 235 -78 217 211 18 18 chr2 15409107 15409164 -237847419 + MIR SINE MIR 98 154 -108 2394 73 0 0 chr2 15409694 15409983 -237846600 - AluSg SINE Alu -21 289 1 311 306 150 17 chr2 15410049 15410229 -237846354 + MLT1I LTR MaLR 3 206 -203 248 243 108 0 chr2 15410455 15410529 -237846054 + L2 LINE L2 3232 3313 0 578 249 76 35 chr2 15410572 15410769 -237845814 + MIR SINE MIR 48 252 -10 1844 187 70 41 chr2 15412247 15412706 -237843877 + MLT1D LTR MaLR 1 472 -33 288 263 17 25 chr2 15413317 15413435 -237843148 + L1MC5 LINE L1 7329 7445 -516 1566 194 10 17 chr2 15413542 15413831 -237842752 + AluJo SINE Alu 1 287 -25 1041 207 37 43 chr2 15413842 15414141 -237842442 + L1MC5 LINE L1 7617 7913 -48 34 84 0 0 chr2 15414473 15414556 -237842027 + AT_rich Low_complexity Low_complexity 1 83 0 231 287 81 11 chr2 15414977 15415064 -237841519 - L2 LINE L2 -23 3249 3157 530 146 125 0 chr2 15415198 15415294 -237841289 + AluJb SINE Alu 81 188 -124 368 179 51 0 chr2 15415294 15415372 -237841211 + AluS SINE Alu 220 301 0 320 267 109 63 chr2 15415917 15416138 -237840445 + L1ME LINE L1 4466 4696 -1450 2032 109 3 3 chr2 15416296 15416579 -237840004 + AluSx SINE Alu 21 303 -9 230 239 132 13 chr2 15416579 15416738 -237839845 + L1ME LINE L1 5212 5389 -757 227 284 31 0 chr2 15416787 15416859 -237839724 + L1ME LINE L1 5521 5586 -535 970 97 0 19 chr2 15416972 15417126 -237839457 - L1PA15 LINE L1 -1 6164 6014 1129 203 166 66 chr2 15417460 15417840 -237838743 - Tigger5 DNA MER2_type 0 2323 1 2281 115 25 27 chr2 15418506 15418871 -237837712 - THE1B LTR MaLR 0 364 1 1604 144 20 52 chr2 15419265 15419571 -237837012 - AluJb SINE Alu -7 305 10 463 143 13 0 chr2 15419578 15419655 -237836928 - MER5A DNA MER1_type -111 78 1 1544 212 0 14 chr2 15419955 15420252 -237836331 + AluJb SINE Alu 1 293 -19 1180 195 113 13 chr2 15420347 15420649 -237835934 - MER58B DNA MER1_type -1 340 9 245 337 163 12 chr2 15420688 15420854 -237835729 + MIR SINE MIR 66 256 -6 214 367 31 20 chr2 15420907 15421005 -237835578 - L2 LINE L2 -27 3245 3147 603 219 0 31 chr2 15421267 15421395 -237835188 - L2 LINE L2 -1 3312 3189 193 306 59 24 chr2 15421442 15421527 -237835056 - L2 LINE L2 0 3272 3185 978 207 32 18 chr2 15421601 15421818 -237834765 + MER58A DNA MER1_type 1 220 -4 438 359 141 23 chr2 15421820 15422475 -237834108 - L2 LINE L2 -433 2881 2150 1099 151 80 0 chr2 15422545 15422784 -237833799 - Tigger2 DNA MER2_type 0 2718 2461 1736 123 14 11 chr2 15422815 15423100 -237833483 - Tigger2 DNA MER2_type -1940 778 493 2219 140 9 3 chr2 15423100 15423442 -237833141 - MER2 DNA MER2_type 0 344 1 2024 142 0 0 chr2 15423467 15423781 -237832802 + AluSx SINE Alu 1 314 0 263 266 11 53 chr2 15424601 15424695 -237831888 + MER5B DNA MER1_type 89 178 0 369 318 8 32 chr2 15425192 15425318 -237831265 - MIR SINE MIR -70 138 16 21 0 0 0 chr2 15425318 15425339 -237831244 + AT_rich Low_complexity Low_complexity 1 21 0 239 236 0 0 chr2 15425359 15425414 -237831169 + L1MB7 LINE L1 6070 6124 -60 243 346 0 0 chr2 15426921 15427025 -237829558 + A-rich Low_complexity Low_complexity 1 104 0 209 267 56 67 chr2 15427076 15427166 -237829417 - L2 LINE L2 -41 3231 3143 1108 245 13 71 chr2 15427183 15427562 -237829021 - MLT1A1 LTR MaLR -8 357 1 373 174 41 6 chr2 15428176 15428348 -237828235 + (TA)n Simple_repeat Simple_repeat 1 178 0 2155 116 3 0 chr2 15428421 15428715 -237827868 + AluSx SINE Alu 1 295 -17 229 229 0 0 chr2 15428716 15428777 -237827806 + L1MC4 LINE L1 6652 6712 -1330 1813 162 26 0 chr2 15429053 15429356 -237827227 + AluJb SINE Alu 1 311 -1 28 0 0 0 chr2 15429888 15429916 -237826667 + AT_rich Low_complexity Low_complexity 1 28 0 226 257 71 7 chr2 15430162 15430302 -237826281 + L1MEd LINE L1 893 1041 -5078 1628 248 75 40 chr2 15430471 15431202 -237825381 + HAL1 LINE L1 1151 1907 -600 294 180 0 0 chr2 15431204 15431254 -237825329 + 5S rRNA rRNA 2 51 -70 255 225 54 18 chr2 15431294 15431405 -237825178 + HAL1 LINE L1 1954 2068 -439 1098 266 88 23 chr2 15431424 15431913 -237824670 + L2 LINE L2 2784 3313 0 2557 63 0 0 chr2 15432043 15432346 -237824237 + AluY SINE Alu 1 303 -8 443 258 55 0 chr2 15432427 15432590 -237823993 + HAL1 LINE L1 2240 2411 -96 23 54 0 0 chr2 15432645 15432682 -237823901 + AT_rich Low_complexity Low_complexity 1 37 0 1100 276 96 19 chr2 15432742 15433386 -237823197 + L1ME3 LINE L1 5258 5951 -211 483 18 0 0 chr2 15433509 15433565 -237823018 + (TG)n Simple_repeat Simple_repeat 2 57 0 257 276 213 8 chr2 15434011 15434138 -237822445 - MIR SINE MIR -6 256 104 2392 235 29 25 chr2 15434514 15434977 -237821606 + L1ME2 LINE L1 5429 5898 -266 1689 170 57 33 chr2 15434977 15435075 -237821508 + MER2 DNA MER2_type 1 95 -249 2195 112 0 3 chr2 15435075 15435422 -237821161 + AluY SINE Alu 1 311 0 1689 170 57 33 chr2 15435422 15435659 -237820924 + MER2 DNA MER2_type 95 344 0 2392 235 29 25 chr2 15435659 15435918 -237820665 + L1ME2 LINE L1 5898 6154 -10 331 320 84 39 chr2 15435957 15436160 -237820423 + L1MC4 LINE L1 7829 8040 -2 601 259 34 94 chr2 15436948 15437331 -237819252 + MER34 LTR ERV1 1 360 -182 321 233 9 8 chr2 15437331 15437559 -237819024 + AluJo SINE Alu 1 297 -5 507 200 37 63 chr2 15437561 15437751 -237818832 + MER34 LTR ERV1 353 537 -5 841 183 26 17 chr2 15437794 15438024 -237818559 + MER33 DNA MER1_type 45 276 -48 610 190 15 103 chr2 15438235 15438430 -237818153 + MER5B DNA MER1_type 1 178 0 255 103 0 0 chr2 15439693 15439732 -237816851 + (CA)n Simple_repeat Simple_repeat 2 40 0 231 303 79 0 chr2 15439829 15439905 -237816678 - L2 LINE L2 -1882 1432 1351 273 346 99 49 chr2 15440162 15440486 -237816097 + L2 LINE L2 2523 2862 -452 2360 97 3 6 chr2 15440548 15440859 -237815724 - AluSx SINE Alu -2 310 1 253 293 186 55 chr2 15440868 15441121 -237815462 + L2 LINE L2 2933 3218 -54 6283 40 7 56 chr2 15441583 15442504 -237814079 + SVA Other Other 534 1386 0 807 285 71 38 chr2 15443059 15443295 -237813288 + L2 LINE L2 2910 3164 -149 1946 142 11 62 chr2 15443295 15443669 -237812914 - THE1A LTR MaLR 0 355 1 807 285 71 38 chr2 15443669 15443800 -237812783 + L2 LINE L2 3164 3289 -24 265 312 152 32 chr2 15443839 15443964 -237812619 + MIR3 SINE MIR 5 144 -64 324 188 0 0 chr2 15444193 15444262 -237812321 + GA-rich Low_complexity Low_complexity 2 70 0 282 274 63 21 chr2 15444311 15444536 -237812047 + L1MDa LINE L1 1315 1656 -4726 1955 140 3 10 chr2 15444566 15444859 -237811724 + AluSg SINE Alu 1 291 -19 1015 259 109 31 chr2 15444874 15445717 -237810866 + L1MDa LINE L1 2893 3971 -2411 2150 117 3 0 chr2 15446282 15446581 -237810002 + AluSx SINE Alu 1 300 -12 337 333 15 15 chr2 15448053 15448185 -237808398 - L2 LINE L2 -23 3290 3159 2093 118 0 3 chr2 15448195 15448484 -237808099 + AluSx SINE Alu 1 288 -24 636 251 80 25 chr2 15448890 15449089 -237807494 - MIR SINE MIR 0 262 53 213 383 25 0 chr2 15449180 15449261 -237807322 - L2 LINE L2 -682 2632 2550 1651 174 11 7 chr2 15449282 15449607 -237806976 + AluJb SINE Alu 1 326 0 1929 134 6 35 chr2 15449706 15450020 -237806563 + AluJo SINE Alu 1 305 -7 276 234 13 0 chr2 15450177 15450254 -237806329 + MIR SINE MIR 183 260 -2 2274 123 0 0 chr2 15450411 15450720 -237805863 - AluSx SINE Alu -1 311 3 223 369 18 27 chr2 15450862 15450973 -237805610 + L2 LINE L2 3155 3264 -8 21 0 0 0 chr2 15451194 15451215 -237805368 + AT_rich Low_complexity Low_complexity 1 21 0 306 265 0 0 chr2 15451641 15451721 -237804862 - MER5A DNA MER1_type -49 140 50 22 35 0 0 chr2 15451892 15451921 -237804662 + AT_rich Low_complexity Low_complexity 1 29 0 347 292 39 0 chr2 15451923 15452053 -237804530 + L1ME4a LINE L1 5548 5682 -439 1175 162 4 40 chr2 15452158 15452386 -237804197 + Tigger2a DNA MER2_type 2 221 -213 2126 65 0 43 chr2 15452629 15452907 -237803676 - AluSc SINE Alu -12 297 32 21 57 0 0 chr2 15453379 15453414 -237803169 + AT_rich Low_complexity Low_complexity 1 35 0 948 175 0 0 chr2 15453519 15453743 -237802840 + CT-rich Low_complexity Low_complexity 1 224 0 368 366 8 0 chr2 15454266 15454400 -237802183 + L1MEd LINE L1 43 177 -5942 399 302 74 41 chr2 15454453 15454914 -237801669 + L1MEd LINE L1 269 881 -5238 1044 185 12 0 chr2 15454940 15455113 -237801470 + FAM SINE Alu 1 175 0 206 133 0 44 chr2 15455906 15455951 -237800632 + (CATA)n Simple_repeat Simple_repeat 2 44 0 302 292 83 24 chr2 15457138 15457306 -237799277 + L1ME4a LINE L1 5931 6108 -13 448 83 0 0 chr2 15457907 15457967 -237798616 - MER1B DNA MER1_type 0 333 274 * 1276 173 0 0 chr2 15457963 15458165 -237798418 - MER1B DNA MER1_type -95 202 1 261 182 0 0 chr2 15458249 15458304 -237798279 + (TA)n Simple_repeat Simple_repeat 1 55 0 1864 144 37 17 chr2 15458625 15458923 -237797660 + AluJb SINE Alu 4 307 -5 239 344 88 32 chr2 15459391 15459516 -237797067 - L2 LINE L2 -5 3267 3136 342 261 0 0 chr2 15460000 15460069 -237796514 + L2 LINE L2 3240 3308 -5 191 59 0 29 chr2 15460080 15460114 -237796469 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 307 289 149 25 chr2 15460310 15460431 -237796152 + L2 LINE L2 3108 3243 -29 209 283 57 104 chr2 15461304 15461410 -237795173 + MIR SINE MIR 59 159 -103 187 333 107 28 chr2 15461511 15461688 -237794895 - L2 LINE L2 -163 3109 2919 1124 165 95 126 chr2 15461715 15462127 -237794456 - MER83 LTR ERV1 0 448 50 548 186 0 26 chr2 15462126 15462239 -237794344 - MER83 LTR ERV1 -338 110 1 * 192 77 0 0 chr2 15462338 15462364 -237794219 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 1172 252 87 57 chr2 15462540 15463102 -237793481 + L2 LINE L2 2727 3311 -2 1458 191 89 0 chr2 15463602 15463884 -237792699 - AluJb SINE Alu -5 307 1 431 295 8 0 chr2 15464372 15464501 -237792082 + MER94 DNA DNA 5 134 0 361 279 119 78 chr2 15464812 15465081 -237791502 + MLT1K LTR MaLR 267 546 -42 1051 160 0 0 chr2 15465211 15465367 -237791216 - AluJ SINE Alu -23 289 134 224 314 265 0 chr2 15465533 15465635 -237790948 - MIR SINE MIR -114 148 20 753 141 0 63 chr2 15465913 15466055 -237790528 - AluJ SINE Alu -169 133 1 186 43 0 0 chr2 15466200 15466223 -237790360 + (CAT)n Simple_repeat Simple_repeat 1 23 0 187 247 52 78 chr2 15466279 15466356 -237790227 - MIR SINE MIR -125 137 63 2236 92 0 33 chr2 15466620 15466926 -237789657 + AluSx SINE Alu 1 296 -16 23 33 0 0 chr2 15467238 15467268 -237789315 + AT_rich Low_complexity Low_complexity 1 30 0 2347 87 0 3 chr2 15467627 15467926 -237788657 + AluSq SINE Alu 1 298 -15 315 301 68 8 chr2 15468075 15468208 -237788375 + L1MC4 LINE L1 7899 8039 -3 2364 71 0 3 chr2 15468494 15468790 -237787793 - AluY SINE Alu -16 295 1 1175 174 4 51 chr2 15468890 15469125 -237787458 + AluJo SINE Alu 85 308 -4 448 303 90 6 chr2 15469187 15469365 -237787218 - L1MEd LINE L1 -5015 1104 912 707 291 123 13 chr2 15469443 15469548 -237787035 - L1MEd LINE L1 -5290 829 737 306 0 0 0 chr2 15469548 15469582 -237787001 + (TG)n Simple_repeat Simple_repeat 2 35 0 707 291 123 13 chr2 15469582 15469858 -237786725 - L1MEd LINE L1 -5382 737 406 185 271 240 0 chr2 15470588 15470684 -237785899 + L2 LINE L2 3154 3272 0 287 380 0 9 chr2 15471574 15471682 -237784901 + MIR SINE MIR 26 132 -130 464 169 36 0 chr2 15471727 15471793 -237784790 + MER67A LTR ERV1 15 83 -460 1752 203 127 56 chr2 15471793 15472384 -237784199 + MER67B LTR ERV1 1 633 -28 202 254 14 86 chr2 15472508 15472624 -237783959 + MER5B DNA MER1_type 15 112 -66 2016 143 3 13 chr2 15472661 15472968 -237783615 - AluSx SINE Alu -8 304 1 2158 220 10 44 chr2 15473235 15473754 -237782829 + LTR31 LTR ERV1 104 604 -15 3105 64 59 7 chr2 15473899 15474320 -237782263 - MLT2A1 LTR ERVL 0 444 2 271 169 0 51 chr2 15474351 15474410 -237782173 + MLT1H1 LTR MaLR 53 108 -447 1555 237 69 98 chr2 15474807 15474903 -237781680 + MER72 LTR ERV1 4 101 -621 2193 99 0 3 chr2 15474903 15475207 -237781376 + AluSx SINE Alu 1 303 0 1555 237 69 98 chr2 15475207 15475728 -237780855 + MER72 LTR ERV1 101 601 -121 1706 148 83 0 chr2 15475728 15475883 -237780700 - AluJb SINE Alu -12 300 159 221 0 0 33 chr2 15475883 15475913 -237780670 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1706 148 83 0 chr2 15475913 15476034 -237780549 - AluJb SINE Alu -153 159 1 1555 237 69 98 chr2 15476034 15476135 -237780448 + MER72 LTR ERV1 601 703 -19 232 308 88 31 chr2 15476433 15476503 -237780080 + L2 LINE L2 1637 1702 -1612 1755 169 10 10 chr2 15476503 15476805 -237779778 + AluJo SINE Alu 1 302 -10 232 308 88 31 chr2 15476805 15476961 -237779622 + L2 LINE L2 1702 1876 -1438 365 268 197 0 chr2 15477152 15477294 -237779289 + MER5A DNA MER1_type 17 186 -3 202 345 180 16 chr2 15477294 15477616 -237778967 + L2 LINE L2 2126 2500 -814 741 183 30 71 chr2 15477875 15478072 -237778511 + MER5A DNA MER1_type 1 189 0 1924 207 131 20 chr2 15478209 15478697 -237777886 + MLT1F LTR MaLR 1 542 0 379 318 15 108 chr2 15478704 15479103 -237777480 + L2 LINE L2 2907 3268 -4 250 121 0 0 chr2 15479246 15479279 -237777304 + MLT1G1 LTR MaLR 1 33 -562 4513 139 20 20 chr2 15479279 15480010 -237776573 + ERVL-D LTR ERVL 4724 5454 -310 281 176 29 0 chr2 15480015 15480083 -237776500 + (TATG)n Simple_repeat Simple_repeat 3 72 0 904 147 0 15 chr2 15480131 15480267 -237776316 - AluJo SINE Alu -178 134 1 1758 123 30 23 chr2 15480267 15480568 -237776015 + ERVL-D LTR ERVL 5447 5749 -15 1933 159 18 95 chr2 15480576 15480647 -237775936 + MLT2D LTR ERVL 1 76 -338 2200 110 7 13 chr2 15480647 15480955 -237775628 + AluSq SINE Alu 1 306 -7 1933 159 18 95 chr2 15480955 15481009 -237775574 + MLT2D LTR ERVL 76 133 -281 1766 150 11 25 chr2 15481009 15481295 -237775288 + AluJb SINE Alu 11 292 -20 1933 159 18 95 chr2 15481295 15481609 -237774974 + MLT2D LTR ERVL 133 407 -7 1876 163 3 3 chr2 15481666 15481960 -237774623 + AluJo SINE Alu 3 296 -16 784 260 218 25 chr2 15481968 15482404 -237774179 + MLT1G3 LTR MaLR 1 595 0 1861 237 35 51 chr2 15483550 15484098 -237772485 + MLT1F LTR MaLR 1 539 -3 1637 264 57 22 chr2 15484105 15484560 -237772023 - MLT1J LTR MaLR -2 509 39 1520 256 70 25 chr2 15484695 15485223 -237771360 + MLT1H1 LTR MaLR 3 554 -1 1471 179 13 42 chr2 15486506 15486616 -237769967 - AluJb SINE Alu -14 298 186 1859 73 0 45 chr2 15486616 15486863 -237769720 + AluY SINE Alu 60 295 -16 1471 179 13 42 chr2 15486863 15487059 -237769524 - AluJb SINE Alu -126 186 1 1177 199 61 101 chr2 15487103 15487479 -237769104 + MLT1A1 LTR MaLR 1 361 -4 2341 80 0 3 chr2 15487813 15488099 -237768484 - AluSx SINE Alu -27 285 1 581 131 180 0 chr2 15488121 15488243 -237768340 - L1MB7 LINE L1 0 6184 6041 1849 153 14 4 chr2 15489610 15489891 -237766692 - AluJo SINE Alu -28 284 1 923 241 36 5 chr2 15490208 15490432 -237766151 - MIR SINE MIR -26 236 6 946 124 0 0 chr2 15490433 15490570 -237766013 - AluSg/x SINE Alu -9 303 167 2336 80 10 0 chr2 15490578 15490755 -237765828 - AluSg SINE Alu -5 305 122 279 0 0 0 chr2 15490755 15490786 -237765797 + (TG)n Simple_repeat Simple_repeat 2 32 0 2336 80 10 0 chr2 15490786 15490910 -237765673 - AluSg SINE Alu -188 122 1 262 306 99 0 chr2 15491013 15491124 -237765459 + MIR SINE MIR 51 172 -90 1875 104 0 4 chr2 15492774 15493024 -237763559 - AluSx SINE Alu -30 282 34 2220 107 10 10 chr2 15493631 15493939 -237762644 + AluY SINE Alu 2 309 -2 437 256 152 5 chr2 15494647 15494838 -237761745 - MIR SINE MIR -24 238 20 1795 168 3 7 chr2 15495713 15496010 -237760573 - AluJo SINE Alu -4 308 13 22 0 0 0 chr2 15497943 15497965 -237758618 + AT_rich Low_complexity Low_complexity 1 22 0 395 365 109 8 chr2 15498209 15498604 -237757979 + L3 LINE CR1 1098 1532 -45 2200 95 0 47 chr2 15499105 15499448 -237757135 - AluSx SINE Alu 0 312 1 270 276 125 30 chr2 15499678 15499910 -237756673 + L1 LINE L1 4763 5016 -1130 3055 181 41 5 chr2 15500008 15500572 -237756011 - MER21B-int LTR ERV1 -2914 3844 3261 915 54 0 0 chr2 15500572 15500683 -237755900 - AluY SINE Alu 0 311 201 1420 193 16 0 chr2 15500686 15500929 -237755654 - MER21B-int LTR ERV1 -3944 247 1 303 256 24 12 chr2 15500979 15501061 -237755522 - MER21B LTR ERV1 -54 809 727 1998 173 106 3 chr2 15501133 15501502 -237755081 - MER21B LTR ERV1 -128 735 329 1966 119 12 44 chr2 15502527 15502846 -237753737 - AluSx SINE Alu -3 309 1 1008 305 72 4 chr2 15504460 15505051 -237751532 - L2 LINE L2 -9 3304 2659 1368 249 150 43 chr2 15505053 15505767 -237750816 - L2 LINE L2 -1121 2193 1404 858 233 89 21 chr2 15506321 15506557 -237750026 - MIR SINE MIR 0 262 11 735 190 6 62 chr2 15506655 15506834 -237749749 - FRAM SINE Alu -14 162 1 1481 183 119 4 chr2 15507422 15507690 -237748893 - AluJb SINE Alu -13 299 1 483 102 8 161 chr2 15508040 15508082 -237748501 - L1MB7 LINE L1 -30 6154 6107 2142 114 7 3 chr2 15508082 15508379 -237748204 + AluSx SINE Alu 1 298 -14 483 102 8 161 chr2 15508379 15508454 -237748129 - L1MB7 LINE L1 -77 6107 6055 887 175 35 23 chr2 15508499 15508670 -237747913 - FAM SINE Alu -4 45 1 1729 181 16 0 chr2 15509763 15510066 -237746517 - AluJo SINE Alu -4 308 1 1114 198 54 7 chr2 15510066 15510344 -237746239 - L1M4 LINE L1 -948 5198 4908 6846 60 9 42 chr2 15510717 15512022 -237744561 - SVA Other Other -520 1386 432 5951 75 27 18 chr2 15512036 15512890 -237743693 - SVA Other Other -520 866 5 25 0 0 0 chr2 15513014 15513039 -237743544 + AT_rich Low_complexity Low_complexity 1 25 0 1989 108 63 7 chr2 15513669 15513956 -237742627 - AluSq SINE Alu -10 303 1 819 211 128 40 chr2 15514290 15514634 -237741949 + MLT1A1 LTR MaLR 1 396 0 289 227 30 0 chr2 15515269 15515335 -237741248 + L2 LINE L2 3227 3294 -19 207 0 0 0 chr2 15515720 15515743 -237740840 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1972 112 18 0 chr2 15515746 15515898 -237740685 - AluSx SINE Alu -30 282 121 225 0 0 0 chr2 15515898 15515923 -237740660 + (TG)n Simple_repeat Simple_repeat 2 26 0 1972 112 18 0 chr2 15515923 15516047 -237740536 - AluSx SINE Alu -191 121 1 464 238 69 48 chr2 15516061 15516250 -237740333 - MIR SINE MIR 0 262 70 231 307 92 26 chr2 15516389 15516542 -237740041 + MIR SINE MIR 100 262 0 427 251 114 43 chr2 15516579 15516790 -237739793 - MIR SINE MIR -4 258 33 21 0 0 0 chr2 15516938 15516959 -237739624 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr2 15517309 15517347 -237739236 + AT_rich Low_complexity Low_complexity 1 38 0 1508 179 61 7 chr2 15518160 15518456 -237738127 - MER52A LTR ERV1 0 1755 1444 * 2222 204 131 14 chr2 15518442 15518947 -237737636 - MER52A LTR ERV1 -990 765 202 268 247 72 10 chr2 15519292 15519389 -237737194 - MER52A LTR ERV1 -1652 103 1 254 229 71 0 chr2 15519836 15519906 -237736677 - MIR SINE MIR -112 150 76 23 0 0 0 chr2 15519988 15520011 -237736572 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr2 15520638 15520668 -237735915 + AT_rich Low_complexity Low_complexity 1 30 0 1982 120 20 23 chr2 15521142 15521441 -237735142 - AluSq SINE Alu -15 298 1 2176 135 0 3 chr2 15521485 15521789 -237734794 - AluSx SINE Alu -9 303 1 1054 110 30 0 chr2 15521986 15522150 -237734433 - L1MB3 LINE L1 -1 6182 6014 553 235 80 44 chr2 15523913 15524138 -237732445 + L1M4 LINE L1 2174 2407 -3739 2226 104 116 0 chr2 15524207 15524543 -237732040 - THE1C LTR MaLR 0 375 1 2297 222 103 37 chr2 15524550 15525276 -237731307 + L1ME2 LINE L1 5381 6154 -10 357 220 59 118 chr2 15525337 15525523 -237731060 + L1MC4 LINE L1 7864 8038 -4 329 280 42 49 chr2 15525528 15525671 -237730912 + L1M4 LINE L1 2475 2616 -3530 329 206 71 52 chr2 15528975 15529130 -237727453 - L1MC4 LINE L1 -2 8040 7883 24 67 0 0 chr2 15530422 15530467 -237726116 + AT_rich Low_complexity Low_complexity 1 45 0 1709 132 0 63 chr2 15531383 15531738 -237724845 - AluJb SINE Alu 0 312 1 358 309 119 12 chr2 15532233 15532401 -237724182 - MIR3 SINE MIR -17 191 6 292 262 0 0 chr2 15532777 15532838 -237723745 + MLT1J LTR MaLR 148 208 -303 916 191 0 11 chr2 15533703 15533886 -237722697 - AluJb SINE Alu -1 311 131 337 335 132 0 chr2 15534381 15534563 -237722020 - L1ME LINE L1 -391 5730 5525 331 265 10 39 chr2 15535445 15535547 -237721036 - MER5A DNA MER1_type -90 99 1 616 228 111 19 chr2 15535721 15535883 -237720700 - MER5B DNA MER1_type -1 177 1 263 257 50 50 chr2 15536134 15536235 -237720348 - MARNA DNA Mariner -73 513 413 811 276 49 11 chr2 15538442 15538697 -237717886 - MIR SINE MIR 0 262 3 240 206 29 73 chr2 15538859 15538927 -237717656 - MIR SINE MIR -55 153 89 2072 130 0 6 chr2 15538935 15539250 -237717333 - AluSq SINE Alu 0 313 1 1889 153 0 13 chr2 15539377 15539691 -237716892 - AluJo SINE Alu -2 310 1 199 284 68 14 chr2 15540590 15540664 -237715919 + L2 LINE L2 3187 3264 -8 1026 220 29 4 chr2 15541068 15541313 -237715270 + L1M4 LINE L1 2479 2729 -3417 1849 201 7 14 chr2 15541316 15541753 -237714830 + L1M4 LINE L1 2813 3246 -2900 306 281 0 12 chr2 15541754 15541836 -237714747 - MIR SINE MIR -150 112 32 429 265 52 22 chr2 15541845 15541981 -237714602 + L2 LINE L2 3132 3271 -1 250 202 67 45 chr2 15543584 15543673 -237712910 - MLT1J LTR MaLR -5 506 416 773 267 34 103 chr2 15543720 15544165 -237712418 - MLT1J LTR MaLR -93 418 5 433 309 88 48 chr2 15544242 15544514 -237712069 - L2 LINE L2 0 3272 2990 886 248 191 51 chr2 15544669 15545186 -237711397 - MLT1K LTR MaLR 0 615 2 323 289 67 30 chr2 15545229 15545364 -237711219 - MIR3 SINE MIR -68 140 1 1263 159 133 30 chr2 15545491 15545761 -237710822 + AluJb SINE Alu 1 298 -14 2244 95 0 0 chr2 15546228 15546532 -237710051 - AluSx SINE Alu -8 304 1 2695 172 42 0 chr2 15546562 15547063 -237709520 + L1MB3 LINE L1 5622 6143 -40 2132 112 0 3 chr2 15547063 15547368 -237709215 - AluSx SINE Alu -8 304 1 528 118 12 0 chr2 15547701 15547786 -237708797 + L1MB8 LINE L1 6087 6172 -6 1503 184 8 15 chr2 15548125 15548392 -237708191 + AluJb SINE Alu 2 266 -46 838 26 26 52 chr2 15548419 15548573 -237708010 + (GGAA)n Simple_repeat Simple_repeat 3 152 0 953 161 0 0 chr2 15549077 15549232 -237707351 + AluSg/x SINE Alu 132 286 -24 473 309 135 32 chr2 15550058 15550340 -237706243 - L3 LINE CR1 -281 1296 986 1889 141 10 7 chr2 15551360 15551657 -237704926 - AluSx SINE Alu -14 298 1 2360 70 0 22 chr2 15551657 15551973 -237704610 - AluY SINE Alu -2 309 1 23 0 0 0 chr2 15551983 15552006 -237704577 + AT_rich Low_complexity Low_complexity 1 23 0 443 305 83 20 chr2 15552509 15552742 -237703841 - MIR SINE MIR -14 248 3 306 296 138 37 chr2 15553200 15553389 -237703194 + MIR SINE MIR 34 241 -21 306 366 18 6 chr2 15555476 15555640 -237700943 - L2 LINE L2 -559 2755 2590 435 296 2 15 chr2 15555798 15555973 -237700610 + MER5A DNA MER1_type 7 178 0 236 274 142 18 chr2 15556012 15556125 -237700458 + L2 LINE L2 3144 3270 -2 712 253 50 0 chr2 15556882 15557080 -237699503 - MER3 DNA MER1_type 0 209 2 1853 126 0 14 chr2 15557247 15557563 -237699020 + AluY SINE Alu 1 312 0 422 218 18 55 chr2 15558137 15558247 -237698336 - LTR67 LTR ERVL -449 108 3 1194 333 42 57 chr2 15558279 15559243 -237697340 + L2 LINE L2 2242 3191 -81 585 302 37 37 chr2 15559298 15559540 -237697043 + MIR SINE MIR 20 261 -1 1079 250 28 20 chr2 15559720 15559972 -237696611 - MIR SINE MIR -8 254 1 871 258 18 28 chr2 15560772 15560989 -237695594 - MIR SINE MIR -41 221 7 223 342 88 44 chr2 15561507 15561621 -237694962 - L3b LINE CR1 -24 1559 1441 2152 80 0 10 chr2 15562888 15563177 -237693406 - AluY SINE Alu -11 300 15 2375 207 103 4 chr2 15563605 15564156 -237692427 + L1MB5 LINE L1 5569 6174 0 205 341 76 8 chr2 15566288 15566449 -237690134 - MIR SINE MIR -50 212 40 443 218 99 10 chr2 15566671 15566772 -237689811 - L2 LINE L2 0 3313 3204 222 179 71 18 chr2 15566766 15566822 -237689761 + MIR SINE MIR 199 257 -5 * 191 392 40 20 chr2 15568050 15568249 -237688334 - L2 LINE L2 -244 3028 2826 207 0 0 0 chr2 15569680 15569703 -237686880 + (T)n Simple_repeat Simple_repeat 1 23 0 2335 82 0 13 chr2 15569721 15570036 -237686547 - AluY SINE Alu 0 311 1 2813 148 19 2 chr2 15570038 15570505 -237686078 - L1M3 LINE L1 -345 5823 5349 309 286 67 9 chr2 15570506 15570611 -237685972 - MIR3 SINE MIR -88 120 10 282 277 40 113 chr2 15571160 15571337 -237685246 + MIR SINE MIR 5 168 -40 212 232 18 36 chr2 15571358 15571414 -237685169 - L2 LINE L2 -14 3299 3245 1982 209 72 59 chr2 15571505 15571551 -237685032 + MLT1F LTR MaLR 1 45 -497 2232 100 3 0 chr2 15571551 15571851 -237684732 - AluSp SINE Alu -12 301 1 1982 209 72 59 chr2 15571851 15572330 -237684253 + MLT1F LTR MaLR 45 533 -9 196 330 17 42 chr2 15572978 15573096 -237683487 - L2 LINE L2 -477 2837 2723 296 311 52 37 chr2 15573368 15573503 -237683080 + MIR SINE MIR 35 171 -91 1506 192 32 3 chr2 15573998 15574310 -237682273 + L1MB8 LINE L1 5852 6172 -6 287 294 49 10 chr2 15574416 15574518 -237682065 - MIR3 SINE MIR -43 165 60 437 305 29 29 chr2 15574884 15575058 -237681525 - MIR3 SINE MIR -23 185 12 333 307 158 8 chr2 15575467 15575594 -237680989 + MIR SINE MIR 47 192 -70 2110 127 7 0 chr2 15575898 15576190 -237680393 - AluSq SINE Alu -19 294 1 2293 107 24 0 chr2 15576637 15576935 -237679648 + AluSx SINE Alu 1 305 -7 286 328 40 56 chr2 15577155 15577280 -237679303 - MIR SINE MIR -66 142 20 840 250 29 41 chr2 15577876 15578120 -237678463 + MIR SINE MIR 22 262 0 1981 66 0 59 chr2 15578366 15578699 -237677884 + L1PA7 LINE L1 5867 6182 0 355 278 8 24 chr2 15578813 15578939 -237677644 + MLT1I LTR MaLR 25 148 -261 619 255 98 0 chr2 15578990 15579143 -237677440 - MER58B DNA MER1_type 0 341 174 418 211 17 51 chr2 15579155 15579277 -237677306 + MER3 DNA MER1_type 6 2335 0 560 245 92 0 chr2 15579288 15579451 -237677132 + MLT1I LTR MaLR 232 409 0 315 372 11 21 chr2 15579451 15579639 -237676944 + L2 LINE L2 2864 3049 -223 5825 59 22 16 chr2 15579711 15580925 -237675658 - SVA Other Other -520 1047 1 2044 178 51 12 chr2 15581872 15582282 -237674301 + MSTB1 LTR MaLR 7 432 0 26 50 0 0 chr2 15583652 15583692 -237672891 + AT_rich Low_complexity Low_complexity 1 40 0 270 305 51 11 chr2 15584153 15584270 -237672313 + MIR SINE MIR 74 193 -42 279 244 100 0 chr2 15584297 15584387 -237672196 - L2 LINE L2 -264 3008 2910 767 207 7 0 chr2 15585236 15585381 -237671202 - MLT1G1 LTR MaLR 0 595 450 2178 75 0 0 chr2 15585418 15585684 -237670899 + AluY SINE Alu 33 298 -13 1119 223 9 0 chr2 15585818 15586038 -237670545 - AluJo SINE Alu 0 312 91 487 296 43 26 chr2 15586053 15586286 -237670297 - MLT1G1-int LTR MaLR -821 550 314 735 264 213 10 chr2 15586441 15586737 -237669846 - MLT1G1 LTR MaLR 0 595 240 355 171 43 0 chr2 15586831 15586901 -237669682 - MLT1G1 LTR MaLR -522 73 1 329 154 0 0 chr2 15586947 15586999 -237669584 + Alu SINE Alu 1 52 -250 * 621 243 26 7 chr2 15586960 15587112 -237669471 + MLT1E3 LTR MaLR 464 618 -6 829 233 37 96 chr2 15587113 15587490 -237669093 - MLT1B LTR MaLR -2 388 34 331 373 24 19 chr2 15587928 15588137 -237668446 - MIR SINE MIR -36 226 17 208 319 44 11 chr2 15588976 15589067 -237667516 - L2 LINE L2 -42 3230 3137 215 325 72 0 chr2 15589221 15589304 -237667279 - MIR SINE MIR -78 184 96 2374 79 0 13 chr2 15590057 15590362 -237666221 + AluSx SINE Alu 6 306 -6 896 270 109 31 chr2 15590719 15591141 -237665442 - MER115 DNA AcHobo -238 455 1 246 217 98 7 chr2 15591338 15591417 -237665166 + MIR SINE MIR 48 130 -78 644 196 0 0 chr2 15592899 15593001 -237663582 + FLAM_A SINE Alu 20 121 -21 353 62 297 0 chr2 15593305 15593414 -237663169 + AluSc SINE Alu 196 323 0 2478 176 20 14 chr2 15593418 15593906 -237662677 + L1MC1 LINE L1 5830 6320 -13 268 338 70 7 chr2 15594471 15594613 -237661970 - L2 LINE L2 -1 3312 3162 196 264 6 154 chr2 15594771 15594953 -237661630 - L2 LINE L2 -424 2890 2736 351 65 0 0 chr2 15595497 15595543 -237661040 + (TG)n Simple_repeat Simple_repeat 2 47 0 1454 104 26 2 chr2 15595717 15595962 -237660621 - pTR5 LTR ERV1 -2046 392 42 270 254 0 0 chr2 15595965 15596036 -237660547 - LTR30 LTR ERV1 -108 614 544 4459 108 26 35 chr2 15596040 15597119 -237659464 - pTR5 LTR ERV1 -417 2021 743 1738 132 8 0 chr2 15597223 15597474 -237659109 - L1PB3 LINE L1 -9 6145 5893 37 0 0 0 chr2 15597480 15597517 -237659066 + AT_rich Low_complexity Low_complexity 1 37 0 2127 70 3 54 chr2 15597717 15598066 -237658517 + AluY SINE Alu 1 334 0 225 298 10 96 chr2 15598956 15599060 -237657523 - MIR SINE MIR -89 119 30 460 276 23 35 chr2 15599072 15599246 -237657337 + MLT1L LTR MaLR 28 199 -416 5468 90 6 1 chr2 15599246 15600023 -237656560 - L1PA8 LINE L1 -14 6158 5378 1073 221 62 96 chr2 15600042 15600459 -237656124 + MLT1L LTR MaLR 196 598 -17 411 254 97 118 chr2 15600499 15600838 -237655745 + L2 LINE L2 2927 3258 -14 295 230 195 0 chr2 15601166 15601253 -237655330 + MIR SINE MIR 42 145 -63 4208 124 45 17 chr2 15601306 15601997 -237654586 - MER50 LTR ERV1 -24 710 1 938 194 6 6 chr2 15602140 15602310 -237654273 - FRAM SINE Alu -11 165 1 2100 201 62 40 chr2 15602364 15602853 -237653730 + MER74A LTR ERVL 16 519 -39 2715 87 3 8 chr2 15602853 15603210 -237653373 - THE1A LTR MaLR 0 355 1 2100 201 62 40 chr2 15603210 15603251 -237653332 + MER74A LTR ERVL 519 558 0 210 374 136 4 chr2 15604833 15605106 -237651477 + L2 LINE L2 2446 2754 -560 2004 212 26 11 chr2 15605268 15605721 -237650862 - MLT1C LTR MaLR -7 460 1 458 297 95 0 chr2 15605847 15605995 -237650588 + L2 LINE L2 3111 3272 0 219 306 108 25 chr2 15606065 15606222 -237650361 + L2 LINE L2 2623 2792 -522 254 265 60 0 chr2 15606233 15606316 -237650267 + L1ME LINE L1 5756 5843 -278 2332 160 29 47 chr2 15606332 15606782 -237649801 - MLT2B2 LTR ERVL -73 442 1 1938 216 58 11 chr2 15607050 15607512 -237649071 + MLT1E2 LTR MaLR 143 626 0 1826 161 48 7 chr2 15607527 15607819 -237648764 - AluJb SINE Alu -8 304 1 258 280 30 113 chr2 15608126 15608294 -237648289 - MIR SINE MIR -74 188 35 182 349 198 0 chr2 15609670 15609776 -237646807 + MIR3 SINE MIR 11 137 -71 245 200 15 15 chr2 15610530 15610595 -237645988 - MLT2B2 LTR ERVL 0 515 451 2937 3 0 0 chr2 15610655 15610964 -237645619 - AluYa5 SINE Alu -2 309 1 216 365 19 9 chr2 15611372 15611479 -237645104 - L2 LINE L2 -286 2986 2879 2538 37 44 0 chr2 15611798 15612093 -237644490 + AluY SINE Alu 1 308 -3 339 287 45 38 chr2 15612128 15612285 -237644298 - L2 LINE L2 -814 2500 2343 408 308 103 27 chr2 15613158 15613546 -237643037 - L1ME3A LINE L1 -304 5866 5445 406 286 40 8 chr2 15613670 15613796 -237642787 - MIR SINE MIR -2 260 131 183 217 87 0 chr2 15613813 15613859 -237642724 - L2 LINE L2 0 3313 3264 309 265 20 10 chr2 15614291 15614389 -237642194 + LTR67 LTR ERVL 459 557 0 1916 142 126 0 chr2 15614617 15614935 -237641648 - THE1B LTR MaLR -2 362 5 1886 175 7 0 chr2 15615052 15615360 -237641223 - AluJo SINE Alu -2 310 1 272 239 60 60 chr2 15615583 15615700 -237640883 + L2 LINE L2 3122 3238 -34 348 331 77 8 chr2 15615844 15615974 -237640609 - L2 LINE L2 -13 3259 3121 203 336 98 25 chr2 15616036 15616158 -237640425 - MIR SINE MIR -122 140 10 308 268 47 47 chr2 15616199 15616326 -237640257 - L2 LINE L2 -14 3258 3132 1887 157 10 0 chr2 15616333 15616633 -237639950 - AluJo SINE Alu -9 303 1 193 185 37 93 chr2 15616730 15616784 -237639799 - L2 LINE L2 0 3313 3263 325 368 125 32 chr2 15617676 15617956 -237638627 - L2 LINE L2 -49 3223 2918 180 286 20 0 chr2 15619169 15619218 -237637365 - L2 LINE L2 -8 3305 3256 * 625 307 226 46 chr2 15619207 15620113 -237636470 - L3 LINE CR1 -16 1561 419 1996 151 0 3 chr2 15620113 15620430 -237636153 - AluSx SINE Alu 0 312 1 625 307 226 46 chr2 15620430 15620627 -237635956 - L3 LINE CR1 -1158 419 259 1807 140 81 31 chr2 15620684 15621041 -237635542 + THE1C LTR MaLR 1 375 0 388 266 37 0 chr2 15621315 15621424 -237635159 + MER94 DNA DNA 1 113 -21 219 232 7 162 chr2 15621872 15622014 -237634569 - MIR3 SINE MIR -3 205 86 231 349 31 14 chr2 15622487 15622656 -237633927 + MIR SINE MIR 88 262 0 748 201 88 34 chr2 15622674 15622878 -237633705 - MER20 DNA MER1_type -3 216 2 334 271 97 52 chr2 15622912 15623067 -237633516 + MIR SINE MIR 6 167 -95 2412 64 0 3 chr2 15623349 15623645 -237632938 - AluY SINE Alu -14 297 3 322 264 131 0 chr2 15623766 15623915 -237632668 - MIR SINE MIR -73 189 23 218 247 9 76 chr2 15623980 15624011 -237632572 + GA-rich Low_complexity Low_complexity 1 33 -434 2127 172 21 3 chr2 15624011 15624394 -237632189 - MLT1B LTR MaLR 0 390 1 218 247 9 76 chr2 15624394 15624481 -237632102 + GA-rich Low_complexity Low_complexity 33 467 0 224 257 29 0 chr2 15625086 15625156 -237631427 - MIR SINE MIR -56 152 81 1211 243 23 32 chr2 15625641 15625987 -237630596 - MLT1C LTR MaLR 0 467 125 488 310 103 59 chr2 15626956 15627057 -237629526 - L2 LINE L2 -2 3311 3216 2351 87 7 0 chr2 15627057 15627346 -237629237 + AluSc SINE Alu 3 293 -16 488 310 103 59 chr2 15627346 15627583 -237629000 - L2 LINE L2 -97 3216 2958 1350 57 119 0 chr2 15627676 15627870 -237628713 + MER30 DNA MER1_type 14 230 0 188 310 152 43 chr2 15628435 15628619 -237627964 - L2 LINE L2 -12 3301 3098 321 261 34 0 chr2 15628897 15628985 -237627598 - MIR SINE MIR -71 137 47 205 294 23 90 chr2 15629297 15629474 -237627109 + L3 LINE CR1 774 938 -639 933 120 8 15 chr2 15629478 15629611 -237626972 - AluSq/x SINE Alu -181 132 1 563 338 71 11 chr2 15629627 15629896 -237626687 + L3 LINE CR1 938 1222 -355 202 356 81 0 chr2 15629995 15630082 -237626501 + L3 LINE CR1 1417 1510 -67 662 215 246 0 chr2 15630097 15630292 -237626291 - MIR SINE MIR 0 262 20 192 311 14 40 chr2 15630288 15630362 -237626221 + L3 LINE CR1 1504 1575 -2 * 268 317 122 19 chr2 15631180 15631385 -237625198 + L2 LINE L2 2946 3171 -101 201 74 0 0 chr2 15632087 15632114 -237624469 + (TGAA)n Simple_repeat Simple_repeat 2 28 0 193 286 0 20 chr2 15632505 15632554 -237624029 - MIR SINE MIR -89 173 126 2152 104 27 7 chr2 15632883 15633180 -237623403 - AluSg SINE Alu -7 303 1 476 246 271 10 chr2 15633725 15633924 -237622659 - MIR SINE MIR -7 255 5 255 298 178 48 chr2 15634659 15634867 -237621716 - MIR SINE MIR -15 247 13 429 328 55 37 chr2 15635262 15635588 -237620995 + L2 LINE L2 2555 2886 -428 303 260 0 13 chr2 15635644 15635721 -237620862 + L2 LINE L2 2894 2969 -303 1872 139 18 4 chr2 15636089 15636392 -237620191 - AluSx SINE Alu 0 307 1 247 319 11 43 chr2 15636406 15636500 -237620083 - MIR SINE MIR -164 98 8 498 244 208 25 chr2 15637065 15637339 -237619244 + MLT1J2 LTR MaLR 1 324 -126 395 253 12 0 chr2 15637357 15637440 -237619143 + L2 LINE L2 3189 3272 0 181 307 188 0 chr2 15637470 15637571 -237619012 - MIR SINE MIR -72 190 71 269 320 34 54 chr2 15637731 15637878 -237618705 + MER5A DNA MER1_type 18 161 -28 * 426 340 27 7 chr2 15637752 15637902 -237618681 - MER5B DNA MER1_type -22 156 4 602 293 44 0 chr2 15637914 15638095 -237618488 + MIR SINE MIR 20 208 -54 981 261 80 3 chr2 15638423 15638737 -237617846 - L1MD2 LINE L1 -205 6154 5817 1038 93 7 0 chr2 15638743 15638883 -237617700 - AluSg/x SINE Alu -2 310 170 1790 218 107 6 chr2 15638885 15639353 -237617230 - L1ME1 LINE L1 -340 5826 5312 2498 241 43 30 chr2 15639374 15640343 -237616240 - L1ME1 LINE L1 -5 6095 5109 1270 233 167 12 chr2 15640347 15640767 -237615816 - L1MD2 LINE L1 -10 6349 5865 562 117 47 39 chr2 15640773 15640901 -237615682 - L1MDa LINE L1 -3922 2618 2490 * 1267 170 26 26 chr2 15640884 15641195 -237615388 - L1MDa LINE L1 -4375 2165 1855 * 2070 237 94 16 chr2 15641194 15641690 -237614893 - L1ME1 LINE L1 -1054 5026 4570 1036 203 85 42 chr2 15641690 15642020 -237614563 + MER2 DNA MER2_type 1 344 0 2070 237 94 16 chr2 15642020 15642355 -237614228 - L1ME1 LINE L1 -1510 4570 3977 895 201 6 0 chr2 15642355 15642519 -237614064 - MLT1E LTR MaLR 0 593 429 255 191 0 0 chr2 15642519 15642561 -237614022 + AluSp SINE Alu 136 177 -126 1731 191 26 0 chr2 15642641 15642945 -237613638 - AluJo SINE Alu 0 312 1 4044 246 20 25 chr2 15642947 15644274 -237612309 - L1ME1 LINE L1 -2299 3781 2462 300 253 42 42 chr2 15644267 15644362 -237612221 - L1ME1 LINE L1 -5970 100 6 * 198 345 95 0 chr2 15644928 15645044 -237611539 - MIR3 SINE MIR -69 139 13 751 295 0 20 chr2 15645453 15645653 -237610930 - MIR SINE MIR 0 262 67 511 308 133 56 chr2 15646300 15646622 -237609961 + L2 LINE L2 2926 3272 0 341 256 53 6 chr2 15646836 15646967 -237609616 - MIR SINE MIR -9 199 58 277 224 0 66 chr2 15648244 15648320 -237608263 - MIR SINE MIR -100 108 38 290 241 36 24 chr2 15648357 15648440 -237608143 + MIR3 SINE MIR 110 193 -15 297 235 139 12 chr2 15648647 15648765 -237607818 + MIR SINE MIR 54 182 -68 411 277 62 15 chr2 15649122 15649252 -237607331 - MIR SINE MIR -70 192 57 194 321 36 0 chr2 15649463 15649519 -237607064 - L2 LINE L2 0 3272 3215 525 270 56 42 chr2 15650181 15650396 -237606187 + MIR SINE MIR 13 230 -32 400 323 214 5 chr2 15650536 15650728 -237605855 - L3 LINE CR1 -8 1569 1338 251 333 82 0 chr2 15651091 15651248 -237605335 + MIR SINE MIR 1 171 -37 285 159 159 0 chr2 15652961 15653024 -237603559 + L1MC1 LINE L1 6259 6331 -2 424 329 7 0 chr2 15653127 15653264 -237603319 + MIR SINE MIR 109 246 -16 185 354 31 31 chr2 15654386 15654516 -237602067 - MIR3 SINE MIR -76 132 3 257 298 85 21 chr2 15655042 15655136 -237601447 + MIR3 SINE MIR 60 159 -49 194 343 125 28 chr2 15655304 15655520 -237601063 - L2 LINE L2 -337 2977 2741 186 189 0 0 chr2 15655544 15655581 -237601002 + (TAA)n Simple_repeat Simple_repeat 2 38 0 1122 198 28 32 chr2 15655613 15655865 -237600718 + MLT1A1 LTR MaLR 115 365 0 237 245 98 98 chr2 15656129 15656333 -237600250 + L2 LINE L2 2507 2710 -604 3687 160 26 75 chr2 15656335 15657208 -237599375 + L1MB5 LINE L1 5344 6174 0 1197 271 89 19 chr2 15657266 15657831 -237598752 + L2 LINE L2 2703 3313 0 226 284 0 15 chr2 15657964 15658031 -237598552 + MIR SINE MIR 173 238 -24 1767 181 10 44 chr2 15658195 15658582 -237598001 + MLT1B LTR MaLR 6 379 -11 266 0 29 0 chr2 15659130 15659164 -237597419 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1493 218 68 2 chr2 15659217 15659612 -237596971 + MER97b DNA MER1_type? 243 663 -390 1635 142 84 18 chr2 15659612 15659887 -237596696 - AluJb SINE Alu -13 299 7 381 226 43 34 chr2 15659893 15659952 -237596631 + MER97b DNA MER1_type? 725 782 -271 627 149 0 26 chr2 15659952 15660066 -237596517 + L1MA3 LINE L1 6195 6305 0 381 226 43 34 chr2 15660066 15660175 -237596408 + MER97b DNA MER1_type? 782 1051 -2 294 357 24 0 chr2 15660391 15660517 -237596066 + MIR3 SINE MIR 52 180 -28 272 294 106 44 chr2 15661653 15661833 -237594750 - MIR SINE MIR -33 229 39 2508 112 3 32 chr2 15661921 15662296 -237594287 + THE1B LTR MaLR 1 364 0 363 283 30 41 chr2 15662949 15663130 -237593453 - MIR SINE MIR -63 145 16 381 272 169 42 chr2 15663763 15663976 -237592607 + MIR SINE MIR 12 251 -11 391 229 77 77 chr2 15664101 15664271 -237592312 - MIR3 SINE MIR -32 176 7 221 245 230 0 chr2 15664359 15664469 -237592114 + MIR SINE MIR 45 190 -56 477 318 35 12 chr2 15664636 15664809 -237591774 + MIR3 SINE MIR 15 191 -17 201 333 28 9 chr2 15666020 15666128 -237590455 + MIR SINE MIR 38 147 -61 187 295 172 0 chr2 15666811 15666933 -237589650 + MIR3 SINE MIR 10 152 -56 259 341 91 0 chr2 15667007 15667139 -237589444 + MIR SINE MIR 48 191 -71 2262 101 0 46 chr2 15667227 15667554 -237589029 + AluSq SINE Alu 1 312 -1 182 254 141 45 chr2 15667610 15667787 -237588796 + L2 LINE L2 2760 2953 -361 304 235 15 0 chr2 15667813 15667881 -237588702 + MER81 DNA DNA 26 94 -20 396 248 31 16 chr2 15667982 15668111 -237588472 + L2 LINE L2 3102 3232 -81 277 306 149 15 chr2 15668133 15668267 -237588316 - MIR SINE MIR -77 185 34 211 315 43 11 chr2 15668295 15668387 -237588196 + L2 LINE L2 3219 3313 0 464 302 23 17 chr2 15669178 15669350 -237587233 - MIR SINE MIR -43 219 47 279 244 61 12 chr2 15669423 15669505 -237587078 - MIR3 SINE MIR -21 187 102 212 317 77 0 chr2 15671917 15672021 -237584562 + MIR3 SINE MIR 82 193 -15 1193 249 12 15 chr2 15672735 15673072 -237583511 + L1ME2 LINE L1 5820 6155 -9 1939 179 97 2 chr2 15673085 15673516 -237583067 + L1MB8 LINE L1 5707 6178 0 225 273 168 28 chr2 15673742 15673885 -237582698 + MIR SINE MIR 97 259 -3 * 229 328 26 35 chr2 15673875 15673991 -237582592 - MIR SINE MIR -102 160 46 7224 41 1 0 chr2 15674298 15675645 -237580938 - L1PA4 LINE L1 0 6155 4808 1817 167 15 6 chr2 15675645 15675974 -237580609 + MLT1A1 LTR MaLR 34 365 0 2030 159 36 0 chr2 15676840 15677231 -237579352 - L1MB4 LINE L1 -8 6172 5768 185 298 35 0 chr2 15677253 15677310 -237579273 - L2 LINE L2 -31 3282 3224 2119 127 0 0 chr2 15677993 15678326 -237578257 - AluSx SINE Alu 0 333 1 1820 176 3 3 chr2 15678683 15678985 -237577598 + AluJo SINE Alu 5 306 -6 1949 154 3 0 chr2 15679040 15679359 -237577224 - AluSx SINE Alu 0 320 1 726 133 4 16 chr2 15680783 15681040 -237575543 + (TG)n Simple_repeat Simple_repeat 1 254 0 244 273 91 30 chr2 15681380 15681479 -237575104 - L2 LINE L2 0 3313 3209 324 292 39 23 chr2 15682561 15682691 -237573892 - L3 LINE CR1 -47 1530 1399 459 231 97 31 chr2 15682914 15683099 -237573484 - MIR3 SINE MIR -40 168 7 478 258 137 11 chr2 15685853 15686035 -237570548 - MIR SINE MIR -20 242 38 463 322 65 15 chr2 15686027 15686226 -237570357 + MIR SINE MIR 37 245 -17 * 761 262 93 4 chr2 15686376 15686443 -237570140 - MIR SINE MIR -5 257 197 2175 124 0 0 chr2 15686443 15686741 -237569842 - AluSx SINE Alu -14 298 1 761 262 93 4 chr2 15686741 15686898 -237569685 - MIR SINE MIR -65 197 13 445 248 28 28 chr2 15686929 15687074 -237569509 + L2 LINE L2 3169 3313 0 673 117 36 0 chr2 15687465 15687602 -237568981 + (TCCA)n Simple_repeat Simple_repeat 3 144 0 633 149 37 0 chr2 15687630 15687791 -237568792 + (TCCA)n Simple_repeat Simple_repeat 4 170 0 338 317 28 35 chr2 15688775 15688917 -237567666 - MIR SINE MIR -19 243 103 396 207 21 79 chr2 15689082 15689222 -237567361 + MIR SINE MIR 119 250 -12 991 228 5 5 chr2 15689494 15689700 -237566883 + MER58A DNA MER1_type 18 223 -1 194 314 74 58 chr2 15689720 15689841 -237566742 + L2 LINE L2 3137 3259 -13 904 90 60 0 chr2 15691100 15691233 -237565350 + LTR24 LTR ERV1 11 151 -316 5158 107 34 5 chr2 15691245 15692059 -237564524 + L1PB3 LINE L1 5317 6154 0 1623 160 98 3 chr2 15692070 15692377 -237564206 + LTR24 LTR ERV1 132 467 0 263 289 16 58 chr2 15692379 15692500 -237564083 + MIR SINE MIR 27 142 -120 2144 115 0 4 chr2 15692504 15692782 -237563801 + AluSc SINE Alu 1 277 -32 411 21 0 0 chr2 15692783 15692831 -237563752 + (GAAA)n Simple_repeat Simple_repeat 2 49 0 2851 248 27 2 chr2 15693442 15694079 -237562504 - MER82 DNA MER2_type 0 653 1 268 347 61 0 chr2 15694325 15694423 -237562160 + MIR3 SINE MIR 85 188 -20 912 253 13 9 chr2 15694643 15694868 -237561715 - MIR SINE MIR -29 233 8 329 130 191 2 chr2 15694912 15694983 -237561600 + MER5A DNA MER1_type 27 98 -80 238 289 78 31 chr2 15695042 15695170 -237561413 - MIR SINE MIR -86 176 43 388 351 118 11 chr2 15695605 15695876 -237560707 - L3 LINE CR1 -33 1544 1245 308 312 58 14 chr2 15696384 15696522 -237560061 + MIR SINE MIR 93 236 -26 264 276 49 81 chr2 15696818 15696941 -237559642 - MIR SINE MIR -73 189 71 272 217 0 17 chr2 15697845 15697905 -237558678 + L2 LINE L2 3009 3067 -205 183 276 219 8 chr2 15698279 15698402 -237558181 + L2 LINE L2 3160 3308 -5 228 246 0 0 chr2 15698413 15698482 -237558101 + GA-rich Low_complexity Low_complexity 4 72 0 192 302 0 32 chr2 15699580 15699643 -237556940 - MIR SINE MIR -168 94 34 475 279 75 30 chr2 15700468 15700669 -237555914 - MIR SINE MIR -3 259 50 338 344 8 0 chr2 15701563 15701685 -237554898 - MIR SINE MIR -67 141 19 1272 194 78 34 chr2 15702194 15702488 -237554095 + AluJb SINE Alu 3 309 -3 314 275 179 23 chr2 15703190 15703376 -237553207 + MIR SINE MIR 2 206 -56 381 273 0 27 chr2 15703529 15703639 -237552944 - MER94 DNA DNA -27 107 1 345 288 91 26 chr2 15704036 15704236 -237552347 - MIR SINE MIR -42 220 17 375 289 127 17 chr2 15704363 15704536 -237552047 - MIR3 SINE MIR -1 207 16 366 258 232 56 chr2 15704888 15705121 -237551462 - L2 LINE L2 -2 3270 2997 268 365 54 24 chr2 15705156 15705323 -237551260 - L2 LINE L2 -463 2851 2680 408 287 127 11 chr2 15705378 15705559 -237551024 + L2 LINE L2 2567 2768 -546 461 331 78 59 chr2 15705642 15706013 -237550570 + L2 LINE L2 2895 3272 0 215 351 54 0 chr2 15706297 15706371 -237550212 + L2 LINE L2 3104 3181 -91 198 286 32 0 chr2 15706440 15706503 -237550080 - L2 LINE L2 -86 3186 3122 334 287 139 0 chr2 15706718 15706847 -237549736 - MLT1J2 LTR MaLR -23 427 281 922 186 27 41 chr2 15706852 15706939 -237549644 - MER20 DNA MER1_type -1 218 131 1858 137 14 75 chr2 15706939 15707298 -237549285 + MER1B DNA MER1_type 1 337 0 922 186 27 41 chr2 15707298 15707431 -237549152 - MER20 DNA MER1_type -88 131 1 717 250 27 87 chr2 15707432 15707732 -237548851 - MLT1J2 LTR MaLR -167 283 2 309 280 19 38 chr2 15709723 15709880 -237546703 + CT-rich Low_complexity Low_complexity 2 155 0 1015 169 12 0 chr2 15711400 15711566 -237545017 - AluJb SINE Alu -8 304 137 181 240 53 13 chr2 15711827 15711902 -237544681 - MIR3 SINE MIR -20 188 111 333 240 29 10 chr2 15712227 15712331 -237544252 + MIR3 SINE MIR 10 115 -93 315 290 183 0 chr2 15712646 15712777 -237543806 - MIR3 SINE MIR -22 186 32 203 232 36 0 chr2 15712797 15712853 -237543730 - MIR SINE MIR -63 145 88 582 110 11 0 chr2 15713684 15713775 -237542808 - AluSg SINE Alu -218 92 1 253 208 42 28 chr2 15715256 15715328 -237541255 - LTR16A LTR ERVL -97 353 281 475 308 39 0 chr2 15716186 15716342 -237540241 - MIR SINE MIR -44 218 57 246 147 51 46 chr2 15716390 15716455 -237540128 - MIR SINE MIR -63 145 97 1932 83 0 0 chr2 15716925 15717154 -237539429 - AluSx SINE Alu -83 229 1 2408 98 0 0 chr2 15717354 15717650 -237538933 - AluSg SINE Alu -14 296 1 247 280 10 31 chr2 15717692 15717805 -237538778 + GA-rich Low_complexity Low_complexity 3 189 0 800 193 118 112 chr2 15717958 15718563 -237538020 - LTR50 LTR ERVL -4 791 18 276 222 28 0 chr2 15718714 15718786 -237537797 - L1ME4a LINE L1 -81 6040 5967 2076 98 8 0 chr2 15718801 15719067 -237537516 - AluSx SINE Alu -32 280 13 1890 203 64 2 chr2 15719163 15719601 -237536982 + MLT1C LTR MaLR 1 465 -2 1404 176 203 8 chr2 15719858 15720228 -237536355 - L1MA4A LINE L1 -29 6274 5833 37 0 0 0 chr2 15720233 15720270 -237536313 + AT_rich Low_complexity Low_complexity 1 37 0 602 216 8 13 chr2 15720283 15720477 -237536106 + L1MA4A LINE L1 5774 5969 -162 34 24 0 0 chr2 15720478 15720519 -237536064 + AT_rich Low_complexity Low_complexity 1 41 0 9093 154 41 24 chr2 15720519 15721695 -237534888 - L1M1 LINE L1 -512 5791 4636 2299 125 0 0 chr2 15721695 15722007 -237534576 - AluSx SINE Alu 0 312 1 9093 154 41 24 chr2 15722007 15722716 -237533867 - L1M1 LINE L1 -1667 4636 3856 2135 132 3 3 chr2 15722716 15723019 -237533564 - AluSx SINE Alu -8 304 2 9093 154 41 24 chr2 15723019 15723442 -237533141 - L1M1 LINE L1 -2447 3856 3442 437 307 87 64 chr2 15723714 15723832 -237532751 - L1ME LINE L1 -589 5532 5418 2149 149 3 0 chr2 15723832 15724140 -237532443 + AluSx SINE Alu 1 309 -3 437 307 87 64 chr2 15724140 15724584 -237531999 - L1ME LINE L1 -703 5418 4991 2611 34 3 0 chr2 15725203 15725500 -237531083 + AluY SINE Alu 1 298 -13 445 311 48 82 chr2 15725679 15726033 -237530550 - L2 LINE L2 -435 2879 2538 1507 224 18 23 chr2 15726398 15726786 -237529797 - L1ME LINE L1 -1805 4341 3956 195 323 162 20 chr2 15727596 15727695 -237528888 - L2 LINE L2 -5 3267 3155 226 294 20 98 chr2 15727964 15728168 -237528415 + MIR SINE MIR 73 260 -2 2149 128 0 0 chr2 15728209 15728513 -237528070 + AluSx SINE Alu 1 304 -8 260 238 138 25 chr2 15728842 15728922 -237527661 - L2 LINE L2 -5 3267 3179 210 114 71 171 chr2 15729356 15729426 -237527157 - MER91B DNA MER1_type 0 140 78 620 323 36 0 chr2 15730498 15730690 -237525893 - L2 LINE L2 -12 3301 3103 2097 109 7 0 chr2 15730704 15731006 -237525577 - AluSq SINE Alu -9 304 1 239 297 11 22 chr2 15731071 15731162 -237525421 - L2 LINE L2 -611 2703 2614 1314 234 246 30 chr2 15731175 15731846 -237524737 + HAL1 LINE L1 1692 2507 0 2949 200 55 29 chr2 15731873 15732661 -237523922 + L1ME2 LINE L1 5192 6006 -158 2423 146 25 15 chr2 15732841 15733246 -237523337 + Tigger2a DNA MER2_type 26 434 0 489 236 0 0 chr2 15733249 15733359 -237523224 + L1ME2 LINE L1 6046 6155 -9 667 161 0 17 chr2 15733371 15733489 -237523094 + U5 snRNA snRNA 1 116 0 2067 119 7 0 chr2 15733562 15733865 -237522718 + AluSx SINE Alu 1 305 -7 543 107 0 0 chr2 15733876 15733951 -237522632 + AluSc SINE Alu 159 233 -76 546 57 0 0 chr2 15733963 15734033 -237522550 + (CA)n Simple_repeat Simple_repeat 2 71 0 719 190 56 14 chr2 15734220 15734362 -237522221 + MLT1G1 LTR MaLR 448 595 0 298 330 12 0 chr2 15734364 15734399 -237522184 + MLT1G1-int LTR MaLR 3 36 -1350 225 65 0 0 chr2 15734399 15734430 -237522153 + (CA)n Simple_repeat Simple_repeat 2 32 0 298 330 12 0 chr2 15734430 15734502 -237522081 + MLT1G1-int LTR MaLR 36 112 -1274 326 232 10 0 chr2 15734623 15734722 -237521861 + L1MA7 LINE L1 6192 6291 0 21 0 0 0 chr2 15734751 15734772 -237521811 + AT_rich Low_complexity Low_complexity 1 21 0 352 234 70 23 chr2 15734785 15734913 -237521670 + MLT1G1-int LTR MaLR 419 552 -819 3741 150 30 7 chr2 15734914 15735586 -237520997 + L1MC1 LINE L1 5647 6333 0 547 210 8 40 chr2 15736181 15736305 -237520278 + MLT1G1 LTR MaLR 471 590 -5 1972 137 0 13 chr2 15736312 15736626 -237519957 + AluSx SINE Alu 1 310 -2 427 201 58 26 chr2 15736647 15736801 -237519782 + L1MEc LINE L1 1315 1473 -4923 329 255 88 0 chr2 15737459 15737561 -237519022 - MER91C DNA MER1_type -2 138 28 186 43 0 0 chr2 15737895 15737918 -237518665 + (TGGGGG)n Simple_repeat Simple_repeat 6 28 0 310 301 14 14 chr2 15738095 15738238 -237518345 + L2 LINE L2 2849 2991 -281 262 181 345 26 chr2 15738416 15738532 -237518051 - MIR SINE MIR 0 262 110 27 0 0 0 chr2 15738897 15738924 -237517659 + AT_rich Low_complexity Low_complexity 1 27 0 312 275 83 8 chr2 15739385 15739505 -237517078 + MIR3 SINE MIR 42 170 -38 241 308 184 17 chr2 15739490 15739724 -237516859 + L3 LINE CR1 1301 1573 -4 * 496 210 0 10 chr2 15740301 15740401 -237516182 + MLT1J2 LTR MaLR 349 447 -3 322 320 140 0 chr2 15740416 15740566 -237516017 + L2 LINE L2 3102 3272 0 204 182 45 0 chr2 15741002 15741046 -237515537 - MIR SINE MIR -82 126 81 327 382 20 7 chr2 15741213 15741365 -237515218 + MIR3 SINE MIR 36 189 -19 674 291 105 49 chr2 15741898 15742242 -237514341 - L2 LINE L2 0 3313 2951 388 316 45 8 chr2 15743032 15743165 -237513418 + L2 LINE L2 3134 3271 -1 316 205 193 0 chr2 15743178 15743261 -237513322 + MIR SINE MIR 58 156 -106 251 282 24 35 chr2 15744624 15744709 -237511874 - MIR3 SINE MIR -31 177 94 251 240 221 10 chr2 15744746 15744811 -237511772 - L2 LINE L2 0 3313 3263 2116 125 3 0 chr2 15744811 15745114 -237511469 + AluSx SINE Alu 1 304 -8 251 240 221 10 chr2 15745114 15745152 -237511431 - L2 LINE L2 -50 3263 3188 262 192 141 40 chr2 15745616 15745715 -237510868 - MIR3 SINE MIR -14 194 86 315 240 103 75 chr2 15745786 15745854 -237510729 + MIR3 SINE MIR 58 123 -85 2047 136 10 0 chr2 15745854 15746162 -237510421 - AluSx SINE Alu -1 311 1 315 240 103 75 chr2 15746162 15746239 -237510344 + MIR3 SINE MIR 123 207 -1 1513 197 13 13 chr2 15746393 15746698 -237509885 - AluJo SINE Alu -7 305 1 307 128 0 0 chr2 15746735 15746782 -237509801 + L2 LINE L2 3225 3271 -1 197 250 244 31 chr2 15747288 15747448 -237509135 + L2 LINE L2 3076 3269 -3 395 286 127 10 chr2 15747664 15747861 -237508722 - MIR3 SINE MIR -3 205 20 279 0 0 0 chr2 15747908 15747939 -237508644 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 235 200 0 122 chr2 15748268 15748358 -237508225 + MIR SINE MIR 66 144 -118 254 156 0 87 chr2 15748382 15748428 -237508155 + L2 LINE L2 3219 3301 -12 2020 125 3 6 chr2 15748524 15748837 -237507746 - AluSx SINE Alu 0 312 1 389 256 83 16 chr2 15748911 15749032 -237507551 + MIR SINE MIR 83 211 -51 201 290 0 29 chr2 15749071 15749140 -237507443 + MIR3 SINE MIR 12 78 -130 373 279 58 41 chr2 15749248 15749420 -237507163 - MER5B DNA MER1_type -3 175 1 333 292 80 26 chr2 15750177 15750290 -237506293 + MIR SINE MIR 30 148 -60 464 287 36 30 chr2 15750941 15751108 -237505475 + MIR SINE MIR 80 247 -15 344 214 137 43 chr2 15751207 15751324 -237505259 + MIR3 SINE MIR 70 197 -11 1763 146 14 0 chr2 15751804 15752091 -237504492 - AluJb SINE Alu -21 291 1 990 139 0 0 chr2 15752193 15752368 -237504215 + AluSg/x SINE Alu 138 312 0 255 254 71 71 chr2 15752715 15752841 -237503742 - MIR SINE MIR -49 213 88 2643 148 14 99 chr2 15753029 15753478 -237503105 - MLT2B2 LTR ERVL -2 513 118 1837 140 7 23 chr2 15753478 15753786 -237502797 + AluSx SINE Alu 9 311 -1 2643 148 14 99 chr2 15753786 15753892 -237502691 - MLT2B2 LTR ERVL -397 118 5 275 115 0 96 chr2 15753948 15754000 -237502583 + MLT1B LTR MaLR 1 47 -343 2172 176 36 5 chr2 15754001 15754393 -237502190 + MLT2B3 LTR ERVL 2 405 -149 2846 222 45 25 chr2 15754649 15754763 -237501820 + MER82 DNA MER2_type 1 111 -542 2176 95 3 13 chr2 15754763 15755067 -237501516 - AluSx SINE Alu -11 301 1 2846 222 45 25 chr2 15755067 15755592 -237500991 + MER82 DNA MER2_type 111 653 0 2191 252 43 10 chr2 15755683 15756287 -237500296 + L1ME3 LINE L1 5539 6162 0 245 217 15 14 chr2 15756439 15756509 -237500074 - MIR3 SINE MIR -53 155 110 382 297 62 33 chr2 15756583 15756972 -237499611 + MLT1L LTR MaLR 89 567 0 225 359 39 8 chr2 15757049 15757177 -237499406 + LTR16C LTR ERVL 292 423 -68 2231 128 22 33 chr2 15757641 15758009 -237498574 - THE1B LTR MaLR 0 364 1 379 182 0 0 chr2 15758245 15758311 -237498272 + LTR16C LTR ERVL 426 491 0 1388 250 76 16 chr2 15758441 15758877 -237497706 - MLT1C LTR MaLR 0 467 6 266 235 109 42 chr2 15758961 15759080 -237497503 + MIR3 SINE MIR 30 156 -52 327 282 282 6 chr2 15759591 15759765 -237496818 - MIR SINE MIR -13 249 28 2556 175 60 20 chr2 15759863 15760400 -237496183 + L1MB3 LINE L1 5586 6143 -40 825 111 0 8 chr2 15760404 15760530 -237496053 + FLAM_C SINE Alu 7 131 -12 286 47 0 23 chr2 15760541 15760584 -237495999 + L1MB3 LINE L1 6134 6175 -8 * 536 150 19 33 chr2 15760576 15760694 -237495889 + L1ME LINE L1 5491 5604 -560 1955 121 0 10 chr2 15761344 15761659 -237494924 + AluSx SINE Alu 1 312 0 246 321 46 9 chr2 15761869 15761978 -237494605 - MIR SINE MIR -29 233 121 190 364 39 23 chr2 15762355 15762484 -237494099 + MIR SINE MIR 20 150 -112 1346 243 2 57 chr2 15762506 15762910 -237493673 + L1ME1 LINE L1 5423 5804 -362 975 202 50 0 chr2 15762911 15763129 -237493454 + L1ME1 LINE L1 5930 6158 -8 234 291 63 0 chr2 15763704 15763783 -237492800 + MIR3 SINE MIR 91 174 -34 767 281 104 18 chr2 15765407 15765734 -237490849 - L1ME3A LINE L1 -5 6165 5811 290 238 238 9 chr2 15766369 15766583 -237490000 + L1ME1 LINE L1 2896 3158 -2988 621 122 8 15 chr2 15766583 15766821 -237489762 + AluSx SINE Alu 19 303 -6 6864 215 43 83 chr2 15766827 15766919 -237489664 + L1ME1 LINE L1 3170 3264 -2902 2423 180 13 15 chr2 15766919 15767381 -237489202 + MER65C LTR ERV1 1 461 0 6864 215 43 83 chr2 15767381 15768822 -237487761 + L1ME1 LINE L1 3264 4761 -1405 1921 120 9 46 chr2 15768822 15769146 -237487437 + AluSx SINE Alu 1 312 0 6864 215 43 83 chr2 15769146 15769688 -237486895 + L1ME1 LINE L1 4761 5323 -843 1441 181 62 20 chr2 15769688 15769980 -237486603 + AluJo SINE Alu 1 304 -8 6864 215 43 83 chr2 15769980 15770372 -237486211 + L1ME1 LINE L1 5323 5729 -437 2379 113 25 22 chr2 15770372 15770735 -237485848 + THE1B LTR MaLR 1 364 0 6864 215 43 83 chr2 15770735 15770772 -237485811 + L1ME1 LINE L1 5729 5766 -400 2233 111 0 0 chr2 15770772 15771079 -237485504 + AluSx SINE Alu 1 307 -5 6864 215 43 83 chr2 15771079 15771323 -237485260 + L1ME1 LINE L1 5766 6018 -148 2373 82 3 0 chr2 15771323 15771629 -237484954 + AluSp SINE Alu 5 311 -2 6864 215 43 83 chr2 15771629 15771690 -237484893 + L1ME1 LINE L1 6018 6080 -86 602 217 9 0 chr2 15771690 15771805 -237484778 + FLAM_A SINE Alu 1 116 -17 6864 215 43 83 chr2 15771805 15771818 -237484765 + L1ME1 LINE L1 6080 6092 -74 266 85 0 21 chr2 15771818 15771865 -237484718 + (TA)n Simple_repeat Simple_repeat 1 46 0 6864 215 43 83 chr2 15771865 15771928 -237484655 + L1ME1 LINE L1 6092 5929 -237 2076 115 26 0 chr2 15771928 15772233 -237484350 + AluSq SINE Alu 1 313 0 6864 215 43 83 chr2 15772233 15772326 -237484257 + L1ME1 LINE L1 5928 6023 -143 2073 114 0 0 chr2 15772326 15772624 -237483959 + AluSx SINE Alu 1 298 -14 703 195 19 19 chr2 15772632 15772791 -237483792 + L1MA10 LINE L1 6176 6334 0 1099 255 64 75 chr2 15772841 15773000 -237483583 + HAL1 LINE L1 1810 1969 -538 1965 112 22 0 chr2 15773000 15773324 -237483259 + AluSx SINE Alu 1 330 0 1099 255 64 75 chr2 15773324 15773868 -237482715 + HAL1 LINE L1 1969 2506 -1 918 151 7 0 chr2 15774682 15774828 -237481755 - AluSg/x SINE Alu -26 284 138 217 200 44 0 chr2 15774858 15774903 -237481680 + CT-rich Low_complexity Low_complexity 3 49 0 24 0 0 0 chr2 15774903 15774927 -237481656 + AT_rich Low_complexity Low_complexity 1 24 0 524 294 80 33 chr2 15774982 15775257 -237481326 - L2 LINE L2 -101 3212 2925 301 263 128 38 chr2 15775348 15775481 -237481102 - LTR16A LTR ERVL -10 440 296 770 267 68 28 chr2 15775495 15775821 -237480762 - HERV16 LTR ERVL -4468 528 190 521 319 72 50 chr2 15775997 15776084 -237480499 - LTR16A LTR ERVL -30 420 336 2272 119 0 0 chr2 15776084 15776394 -237480189 + AluSx SINE Alu 2 311 -1 521 319 72 50 chr2 15776394 15776626 -237479957 - LTR16A LTR ERVL -114 336 94 2319 116 3 0 chr2 15777159 15777470 -237479113 + AluSx SINE Alu 1 312 0 624 163 15 2 chr2 15777496 15777759 -237478824 + AluSx SINE Alu 1 309 0 538 229 80 23 chr2 15778783 15778958 -237477625 + MIR SINE MIR 27 211 -51 2050 133 0 3 chr2 15779368 15779691 -237476892 - AluSx SINE Alu 0 322 1 197 365 177 0 chr2 15779698 15779890 -237476693 + L2 LINE L2 2532 2757 -557 181 329 12 37 chr2 15780090 15780172 -237476411 - L2 LINE L2 0 3313 3234 1178 143 46 19 chr2 15780476 15780692 -237475891 + AluJb SINE Alu 85 306 -6 698 248 103 52 chr2 15780742 15780799 -237475784 + L1ME3A LINE L1 5254 5307 -863 2218 126 32 24 chr2 15780799 15781171 -237475412 - THE1C LTR MaLR 0 375 1 698 248 103 52 chr2 15781171 15781500 -237475083 + L1ME3A LINE L1 5307 5660 -510 25 0 0 0 chr2 15781974 15781999 -237474584 + AT_rich Low_complexity Low_complexity 1 25 0 690 263 39 109 chr2 15781999 15782298 -237474285 + L1ME3A LINE L1 5653 5899 -271 261 0 0 0 chr2 15782298 15782327 -237474256 + (CA)n Simple_repeat Simple_repeat 2 30 0 690 263 39 109 chr2 15782327 15782568 -237474015 + L1ME3A LINE L1 5899 6155 -15 2507 135 3 0 chr2 15783358 15783721 -237472862 + THE1B LTR MaLR 1 364 0 246 313 84 0 chr2 15783837 15783920 -237472663 - L2 LINE L2 -4 3268 3179 1426 266 184 8 chr2 15784111 15784644 -237471939 + MER69 DNA AcHobo 27 653 -1873 1039 157 18 0 chr2 15784646 15784812 -237471771 + AluSg/x SINE Alu 133 301 -9 685 250 13 0 chr2 15784832 15784984 -237471599 + MER69 DNA AcHobo 648 801 -425 1656 183 92 36 chr2 15784995 15785086 -237471497 + MER69 DNA AcHobo 2031 2116 -410 2344 86 3 3 chr2 15785086 15785388 -237471195 + AluSq SINE Alu 1 302 -11 1656 183 92 36 chr2 15785388 15785453 -237471130 + MER69 DNA AcHobo 2116 2176 -350 2088 138 24 3 chr2 15785453 15785751 -237470832 + AluSx SINE Alu 1 304 -8 1656 183 92 36 chr2 15785751 15786062 -237470521 + MER69 DNA AcHobo 2176 2525 -1 214 322 54 13 chr2 15787041 15787190 -237469393 - MIR3 SINE MIR -43 165 11 1611 149 58 0 chr2 15787554 15787795 -237468788 + AluSq SINE Alu 1 255 -58 1793 171 7 3 chr2 15787837 15788130 -237468453 - AluJo SINE Alu -18 294 1 1000 259 36 68 chr2 15788555 15789131 -237467452 + L1MC4a LINE L1 4637 5194 -952 7249 56 2 1 chr2 15789189 15790187 -237466396 + L1PA6 LINE L1 5158 6154 0 296 257 0 0 chr2 15790212 15790286 -237466297 + L1MC4a LINE L1 5368 5441 -733 26 0 0 0 chr2 15790297 15790323 -237466260 + AT_rich Low_complexity Low_complexity 1 26 0 911 283 100 29 chr2 15790323 15790748 -237465835 + L1ME3 LINE L1 5358 5834 -328 2084 93 62 0 chr2 15790748 15791039 -237465544 + AluSx SINE Alu 1 309 -3 911 283 100 29 chr2 15791039 15791149 -237465434 + L1ME3 LINE L1 5834 5935 -227 765 272 22 18 chr2 15791333 15791665 -237464918 + L1MC4a LINE L1 5683 6017 -104 2202 119 10 0 chr2 15791758 15792060 -237464523 + AluSp SINE Alu 1 305 -8 633 251 115 36 chr2 15792656 15792940 -237463643 + L1MC4a LINE L1 5706 6021 -1787 1235 133 23 144 chr2 15792940 15793287 -237463296 + AluSc SINE Alu 1 305 -4 633 251 115 36 chr2 15793287 15793332 -237463251 + L1MC4a LINE L1 6021 6061 -1747 359 300 120 71 chr2 15793349 15793825 -237462758 + L1MC4a LINE L1 6098 6596 -1212 279 191 0 0 chr2 15793825 15793888 -237462695 + GA-rich Low_complexity Low_complexity 1 63 0 245 182 45 0 chr2 15793891 15793935 -237462648 + L1MC4 LINE L1 6697 6742 -1300 1773 42 9 0 chr2 15793935 15794149 -237462434 + L1PA3 LINE L1 5937 6152 -3 1923 220 32 131 chr2 15794207 15794932 -237461651 + L1MC5 LINE L1 6669 7230 -731 453 81 0 0 chr2 15794932 15794994 -237461589 + (TGGA)n Simple_repeat Simple_repeat 3 64 0 1923 220 32 131 chr2 15794994 15795466 -237461117 + L1MC5 LINE L1 7230 7747 -214 423 197 28 0 chr2 15795597 15795668 -237460915 + MER81 DNA DNA 5 77 -37 1612 181 54 0 chr2 15795671 15795947 -237460636 + AluJb SINE Alu 1 291 -21 521 292 143 34 chr2 15795951 15796365 -237460218 + L1MC/D LINE L1 5320 5778 -2030 1857 145 0 53 chr2 15796366 15796669 -237459914 + AluSx SINE Alu 1 287 -25 22 0 0 0 chr2 15796674 15796696 -237459887 + AT_rich Low_complexity Low_complexity 1 22 0 321 236 97 0 chr2 15796833 15796905 -237459678 - MER58 DNA MER1_type 0 2420 2342 275 323 96 25 chr2 15796896 15797094 -237459489 + MLT1J2 LTR MaLR 116 327 -123 * 1468 164 141 0 chr2 15797173 15797429 -237459154 + AluJo SINE Alu 2 293 -9 199 279 33 0 chr2 15797708 15797769 -237458814 - MIR SINE MIR -107 155 93 206 303 49 25 chr2 15798217 15798339 -237458244 + MIR SINE MIR 64 188 -74 1139 231 108 91 chr2 15798585 15798682 -237457901 + MLT1G1 LTR MaLR 1 95 -500 2183 123 0 0 chr2 15798682 15798982 -237457601 + AluSq SINE Alu 1 300 -13 1139 231 108 91 chr2 15798982 15799469 -237457114 + MLT1G1 LTR MaLR 95 595 0 299 298 63 27 chr2 15799847 15800030 -237456553 - L2 LINE L2 -245 3068 2865 2211 116 0 10 chr2 15800030 15800341 -237456242 + AluSx SINE Alu 1 308 -4 299 298 63 27 chr2 15800341 15800482 -237456101 - L2 LINE L2 -448 2865 2731 432 0 0 0 chr2 15800776 15800824 -237455759 + (CA)n Simple_repeat Simple_repeat 1 48 0 243 88 0 0 chr2 15801316 15801350 -237455233 + (CA)n Simple_repeat Simple_repeat 1 34 0 259 100 125 75 chr2 15802143 15802223 -237454360 + MER5A DNA MER1_type 9 92 -97 180 186 68 34 chr2 15802753 15802812 -237453771 - MIR SINE MIR -70 192 132 384 309 67 6 chr2 15803990 15804155 -237452428 - MIR SINE MIR -80 182 8 1958 157 0 10 chr2 15804610 15804923 -237451660 + AluSx SINE Alu 2 311 -1 3066 150 2 43 chr2 15805077 15805658 -237450925 + L1MB3 LINE L1 5613 6169 -14 386 226 104 0 chr2 15805708 15805823 -237450760 - MIR SINE MIR -66 142 16 184 311 37 30 chr2 15805951 15806086 -237450497 + MIR3 SINE MIR 66 201 -7 198 0 0 0 chr2 15806555 15806577 -237450006 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 856 249 117 36 chr2 15806786 15807289 -237449294 - L1ME4a LINE L1 0 6121 5578 584 222 54 76 chr2 15808597 15808782 -237447801 + HAL1 LINE L1 25 205 -2302 244 252 119 84 chr2 15808972 15808991 -237447592 + HAL1 LINE L1 1301 1318 -1189 486 0 0 0 chr2 15808991 15809045 -237447538 + (TA)n Simple_repeat Simple_repeat 2 55 0 1560 171 0 8 chr2 15809045 15809297 -237447286 - AluJb SINE Alu -26 286 37 244 252 119 84 chr2 15809297 15809419 -237447164 + HAL1 LINE L1 1317 1448 -1059 203 54 81 0 chr2 15809431 15809468 -237447115 + T-rich Low_complexity Low_complexity 3 42 0 810 207 59 17 chr2 15809483 15809720 -237446863 + HAL1 LINE L1 1508 1754 -753 4767 231 67 109 chr2 15809739 15810347 -237446236 + L1MEc LINE L1 66 698 -5698 947 129 8 0 chr2 15810347 15810479 -237446104 + FLAM_C SINE Alu 1 133 0 4767 231 67 109 chr2 15810479 15810669 -237445914 + L1MEc LINE L1 698 895 -5501 1839 157 3 23 chr2 15810669 15810975 -237445608 + AluSx SINE Alu 1 300 -12 4767 231 67 109 chr2 15810975 15811315 -237445268 + L1MEc LINE L1 895 1248 -5148 293 274 23 3 chr2 15811315 15811431 -237445152 + MLT1F1 LTR MaLR 30 147 -420 4767 231 67 109 chr2 15811431 15811483 -237445100 + L1MEc LINE L1 1248 1301 -5095 2022 140 3 0 chr2 15811483 15811775 -237444808 + AluSx SINE Alu 1 293 -19 4767 231 67 109 chr2 15811775 15812773 -237443810 + L1MEc LINE L1 1301 2274 -4122 421 287 32 43 chr2 15812778 15812966 -237443617 + MLT1F1 LTR MaLR 1 186 -356 225 132 0 0 chr2 15812966 15813004 -237443579 + (TC)n Simple_repeat Simple_repeat 2 39 0 212 119 0 24 chr2 15813025 15813067 -237443516 + (TC)n Simple_repeat Simple_repeat 2 42 0 962 216 118 15 chr2 15813067 15813384 -237443199 + MLT1F1 LTR MaLR 184 567 0 3701 146 41 65 chr2 15813435 15813743 -237442840 + L1MB4 LINE L1 5444 5758 -422 2019 117 0 4 chr2 15813743 15814016 -237442567 + AluSx SINE Alu 21 292 -20 3701 146 41 65 chr2 15814016 15814174 -237442409 + L1MB4 LINE L1 5758 5918 -262 2272 113 3 3 chr2 15814174 15814483 -237442100 + AluSg1 SINE Alu 1 309 0 3701 146 41 65 chr2 15814483 15814770 -237441813 + L1MB4 LINE L1 5918 6180 0 555 259 102 25 chr2 15814768 15815042 -237441541 + L1MEc LINE L1 2262 2556 -3659 * 2044 127 0 10 chr2 15815043 15815334 -237441249 + AluSx SINE Alu 1 288 -24 534 196 0 0 chr2 15815363 15815465 -237441118 + U13 snRNA snRNA 1 102 -2 22 0 0 0 chr2 15815474 15815496 -237441087 + AT_rich Low_complexity Low_complexity 1 22 0 1724 212 20 36 chr2 15815496 15815779 -237440804 + L1MEc LINE L1 2546 2821 -3394 2180 128 0 0 chr2 15815779 15816077 -237440506 - AluSx SINE Alu -14 298 1 1724 212 20 36 chr2 15816077 15816237 -237440346 + L1MEc LINE L1 2821 2982 -3233 29 0 0 0 chr2 15816337 15816366 -237440217 + AT_rich Low_complexity Low_complexity 1 29 0 201 227 0 0 chr2 15816650 15816694 -237439889 - MIR SINE MIR -115 147 104 2307 106 7 0 chr2 15817263 15817564 -237439019 - AluSp SINE Alu -10 303 1 2300 98 3 16 chr2 15818383 15818690 -237437893 + AluSx SINE Alu 1 303 -9 306 0 0 0 chr2 15818818 15818852 -237437731 + (TA)n Simple_repeat Simple_repeat 1 34 0 205 237 0 144 chr2 15820082 15820157 -237436426 - L3 LINE CR1 -16 1561 1507 2020 189 45 13 chr2 15820157 15820606 -237435977 - MLT1C LTR MaLR -1 466 4 205 237 0 144 chr2 15820606 15820648 -237435935 - L3 LINE CR1 -70 1507 1461 209 200 25 0 chr2 15820707 15820747 -237435836 + CT-rich Low_complexity Low_complexity 1 41 0 274 289 0 0 chr2 15820747 15820823 -237435760 - L2 LINE L2 -13 3300 3225 374 247 0 0 chr2 15820982 15821063 -237435520 + MER94 DNA DNA 2 82 -52 195 265 137 51 chr2 15823003 15823120 -237433463 + L2 LINE L2 3129 3255 -17 266 279 38 0 chr2 15823208 15823287 -237433296 + ORSL DNA AcHobo 1 82 -193 2147 113 24 3 chr2 15823287 15823580 -237433003 + AluSx SINE Alu 1 299 -13 229 216 39 0 chr2 15823580 15823631 -237432952 + ORSL DNA AcHobo 221 273 -2 2393 107 0 0 chr2 15823897 15824206 -237432377 - AluSx SINE Alu -3 309 1 2142 141 0 0 chr2 15825169 15825468 -237431115 + AluSx SINE Alu 1 299 -13 2056 132 4 0 chr2 15825485 15825793 -237430790 + AluSx SINE Alu 1 309 0 607 346 24 8 chr2 15825801 15826055 -237430528 - L3 LINE CR1 -25 1552 1295 2267 115 0 7 chr2 15826251 15826555 -237430028 + AluSg SINE Alu 1 302 -8 547 242 194 5 chr2 15826843 15827029 -237429554 + MIR SINE MIR 30 250 -12 2210 111 20 3 chr2 15827479 15827777 -237428806 - AluSx SINE Alu -9 303 1 2343 67 17 3 chr2 15828029 15828329 -237428254 - AluY SINE Alu -7 304 1 205 273 15 15 chr2 15829261 15829327 -237427256 + L3 LINE CR1 878 943 -634 186 336 115 26 chr2 15829410 15829523 -237427060 + MIR SINE MIR 12 134 -128 634 277 184 0 chr2 15830202 15830408 -237426175 - MIR SINE MIR -4 258 15 255 346 122 33 chr2 15830882 15831096 -237425487 + MIR SINE MIR 25 257 -5 547 299 29 15 chr2 15831117 15831321 -237425262 - L3 LINE CR1 -191 1386 1180 375 387 53 27 chr2 15832170 15832545 -237424038 + L3b LINE CR1 1123 1507 -76 347 203 38 0 chr2 15832990 15833069 -237423514 + Tigger3(Golem) DNA MER2_type 1 82 -2947 * 1116 158 92 79 chr2 15833067 15833091 -237423492 + Tigger3(Golem) DNA MER2_type 2721 2743 -285 2042 156 0 0 chr2 15833091 15833386 -237423197 - AluSx SINE Alu -17 295 1 1116 158 92 79 chr2 15833386 15833431 -237423152 + Tigger3(Golem) DNA MER2_type 2743 2786 -242 2206 68 0 90 chr2 15833431 15833798 -237422785 - AluSg SINE Alu 0 339 1 183 42 0 0 chr2 15833799 15833823 -237422760 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 2208 98 3 3 chr2 15833823 15834109 -237422474 - AluSq SINE Alu -27 286 1 1116 158 92 79 chr2 15834109 15834338 -237422245 + Tigger3(Golem) DNA MER2_type 2785 3028 0 222 283 0 0 chr2 15834338 15834398 -237422185 + (TATG)n Simple_repeat Simple_repeat 3 62 0 2332 231 66 21 chr2 15834420 15834983 -237421600 + MER82 DNA MER2_type 7 594 -59 890 179 19 12 chr2 15834985 15835147 -237421436 - AluSp SINE Alu -16 297 135 260 254 16 0 chr2 15835147 15835210 -237421373 + MER82 DNA MER2_type 589 652 -1 264 161 37 0 chr2 15835664 15835745 -237420838 + (TG)n Simple_repeat Simple_repeat 1 84 0 893 291 42 0 chr2 15835801 15836042 -237420541 + MIR SINE MIR 12 262 0 324 87 0 0 chr2 15836618 15836664 -237419919 - Alu SINE Alu -254 46 1 246 160 0 20 chr2 15836727 15836777 -237419806 - L2 LINE L2 -1 3312 3264 2006 141 0 35 chr2 15837076 15837388 -237419195 + AluSx SINE Alu 1 301 -11 574 186 0 0 chr2 15837729 15837831 -237418752 + MLT1I LTR MaLR 308 409 0 270 272 123 41 chr2 15838710 15838850 -237417733 - MIR SINE MIR -68 140 23 2175 121 6 19 chr2 15839349 15839664 -237416919 + AluSx SINE Alu 1 311 -1 1861 108 76 0 chr2 15839880 15840168 -237416415 + AluSx SINE Alu 1 310 -2 1137 145 19 39 chr2 15841621 15841655 -237414928 + AluSg/x SINE Alu 106 139 -173 2261 124 0 0 chr2 15841655 15841954 -237414629 + AluSx SINE Alu 1 299 -13 1137 145 19 39 chr2 15841954 15842126 -237414457 + AluSg/x SINE Alu 139 308 -4 407 287 102 37 chr2 15842182 15842877 -237413706 - L1ME4a LINE L1 -113 6008 5219 2115 133 0 7 chr2 15843127 15843427 -237413156 - AluJb SINE Alu -14 298 1 200 111 28 0 chr2 15843516 15843552 -237413031 + (TG)n Simple_repeat Simple_repeat 2 38 0 1056 195 180 0 chr2 15843785 15844057 -237412526 - MSTD LTR MaLR 0 396 76 3076 131 23 4 chr2 15844140 15844627 -237411956 + MER41E LTR ERV1 1 496 -16 376 200 12 12 chr2 15844618 15844698 -237411885 - MSTD LTR MaLR -316 80 1 * 218 237 301 11 chr2 15844969 15845062 -237411521 - MIR SINE MIR -73 135 16 276 274 27 0 chr2 15846196 15846269 -237410314 - MIR SINE MIR -87 175 101 216 135 0 0 chr2 15850114 15850151 -237406432 + (T)n Simple_repeat Simple_repeat 1 37 0 543 270 220 10 chr2 15851360 15851560 -237405023 - MIR SINE MIR -1 261 20 231 167 0 0 chr2 15851632 15851674 -237404909 + (TA)n Simple_repeat Simple_repeat 2 43 0 2300 103 0 0 chr2 15851680 15851982 -237404601 - AluSq SINE Alu -11 302 1 203 175 0 0 chr2 15852173 15852213 -237404370 + GA-rich Low_complexity Low_complexity 3 42 0 194 287 53 43 chr2 15853806 15853900 -237402683 - MIR SINE MIR -87 175 81 211 292 92 0 chr2 15854400 15854465 -237402118 + L3 LINE CR1 1265 1335 -242 238 273 45 34 chr2 15854639 15854727 -237401856 - MIR SINE MIR -60 148 60 2208 117 0 7 chr2 15854762 15855061 -237401522 - AluSc SINE Alu -12 297 1 219 353 69 0 chr2 15856490 15856592 -237399991 + L2 LINE L2 3146 3254 -18 3792 150 93 50 chr2 15857373 15858315 -237398268 - THE1C-int LTR MaLR -597 983 1 2523 112 11 16 chr2 15858315 15858691 -237397892 - THE1C LTR MaLR 0 375 2 2642 237 38 3 chr2 15858692 15859275 -237397308 + MER82 DNA MER2_type 45 647 -6 2110 141 3 3 chr2 15859611 15859910 -237396673 + AluSx SINE Alu 1 299 -13 482 318 103 20 chr2 15861718 15861913 -237394670 - MIR SINE MIR -15 247 37 185 289 58 0 chr2 15862536 15862588 -237393995 + L2 LINE L2 3217 3271 -1 612 167 0 0 chr2 15862642 15862744 -237393839 + MER81 DNA DNA 7 108 -6 271 333 72 56 chr2 15862751 15862940 -237393643 - L2 LINE L2 -21 3251 3067 1516 51 0 0 chr2 15862940 15863117 -237393466 - AluY SINE Alu -14 297 121 271 333 72 56 chr2 15863117 15863359 -237393224 - L2 LINE L2 -205 3067 2813 330 211 0 0 chr2 15863468 15863525 -237393058 - L2 LINE L2 -1 3271 3215 460 211 238 7 chr2 15865004 15865151 -237391432 + MER5A DNA MER1_type 9 189 0 680 222 0 81 chr2 15865159 15865344 -237391239 + MER5B DNA MER1_type 1 170 -8 582 278 22 120 chr2 15865521 15865747 -237390836 + L2 LINE L2 2981 3167 -105 1958 88 4 0 chr2 15865747 15865996 -237390587 - AluSc SINE Alu -45 264 15 582 278 22 120 chr2 15865996 15866093 -237390490 + L2 LINE L2 3167 3272 0 206 333 43 0 chr2 15866100 15866169 -237390414 - L2 LINE L2 -64 3249 3178 248 283 109 0 chr2 15867747 15867885 -237388698 + L1ME1 LINE L1 3006 3158 -2988 631 122 8 15 chr2 15867885 15868123 -237388460 + AluSx SINE Alu 19 306 -6 6482 218 43 81 chr2 15868129 15868221 -237388362 + L1ME1 LINE L1 3170 3264 -2902 2440 180 13 15 chr2 15868221 15868683 -237387900 + MER65C LTR ERV1 1 461 0 6482 218 43 81 chr2 15868683 15870124 -237386459 + L1ME1 LINE L1 3264 4758 -1408 2191 122 10 10 chr2 15870124 15870436 -237386147 + AluSx SINE Alu 1 312 0 6482 218 43 81 chr2 15870436 15870978 -237385605 + L1ME1 LINE L1 4758 5319 -847 1606 198 44 3 chr2 15870978 15871271 -237385312 + AluJo SINE Alu 1 305 -7 6482 218 43 81 chr2 15871271 15871663 -237384920 + L1ME1 LINE L1 5319 5724 -442 2407 113 25 22 chr2 15871663 15872026 -237384557 + THE1B LTR MaLR 1 364 0 6482 218 43 81 chr2 15872026 15872063 -237384520 + L1ME1 LINE L1 5724 5761 -405 2389 113 0 0 chr2 15872063 15872373 -237384210 + AluSx SINE Alu 1 310 -2 6482 218 43 81 chr2 15872373 15872614 -237383969 + L1ME1 LINE L1 5761 6010 -156 2543 81 3 0 chr2 15872614 15872922 -237383661 + AluSp SINE Alu 5 313 0 6482 218 43 81 chr2 15872922 15872984 -237383599 + L1ME1 LINE L1 6010 6073 -93 626 217 9 0 chr2 15872984 15873099 -237383484 + FLAM_A SINE Alu 1 116 -17 266 85 0 21 chr2 15873108 15873155 -237383428 + (TA)n Simple_repeat Simple_repeat 1 46 0 6482 218 43 81 chr2 15873155 15873218 -237383365 + L1ME1 LINE L1 6081 5929 -237 2227 115 26 0 chr2 15873218 15873523 -237383060 + AluSq SINE Alu 1 313 0 6482 218 43 81 chr2 15873523 15873616 -237382967 + L1ME1 LINE L1 5928 6023 -143 2207 114 0 0 chr2 15873616 15873913 -237382670 + AluSx SINE Alu 1 297 -15 661 200 19 19 chr2 15873924 15874079 -237382504 + L1MA10 LINE L1 6180 6334 0 248 299 60 22 chr2 15874129 15874263 -237382320 + HAL1 LINE L1 1810 1948 -559 2222 102 7 0 chr2 15874288 15874571 -237382012 + AluSx SINE Alu 1 285 -27 885 285 131 53 chr2 15874971 15875732 -237380851 + L2 LINE L2 1863 2683 -631 186 316 130 52 chr2 15875777 15875981 -237380602 + L2 LINE L2 3005 3236 -77 2139 148 0 0 chr2 15875981 15876292 -237380291 - AluSx SINE Alu -1 311 1 186 316 130 52 chr2 15876292 15876345 -237380238 + L2 LINE L2 3236 3283 -30 464 281 20 48 chr2 15876345 15876491 -237380092 + MIR3 SINE MIR 4 145 -63 25 0 0 0 chr2 15877100 15877125 -237379458 + AT_rich Low_complexity Low_complexity 1 25 0 333 273 114 38 chr2 15877479 15877743 -237378840 + HAL1 LINE L1 2220 2503 -4 742 149 24 34 chr2 15877750 15877990 -237378593 + GA-rich Low_complexity Low_complexity 1 237 0 216 0 0 0 chr2 15878095 15878119 -237378464 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 2306 73 0 3 chr2 15878119 15878406 -237378177 - AluY SINE Alu -25 286 1 513 264 16 8 chr2 15879184 15879305 -237377278 - MIR3 SINE MIR -49 159 38 369 267 68 62 chr2 15879461 15879569 -237377014 - L1ME4a LINE L1 -213 5908 5797 2247 99 0 0 chr2 15879569 15879871 -237376712 + AluSx SINE Alu 2 303 -9 369 267 68 62 chr2 15879871 15879908 -237376675 - L1ME4a LINE L1 -324 5797 5762 1618 171 7 30 chr2 15880695 15880999 -237375584 - AluJo SINE Alu -15 297 1 504 296 84 47 chr2 15881111 15881517 -237375066 - HAL1 LINE L1 -264 2243 1823 944 288 43 29 chr2 15881547 15881853 -237374730 + MLT1I LTR MaLR 57 352 -57 1999 186 28 0 chr2 15881919 15882274 -237374309 + MLT1A1 LTR MaLR 1 365 0 1336 265 79 36 chr2 15882298 15882929 -237373654 - HAL1 LINE L1 -767 1740 1083 2251 91 7 3 chr2 15883294 15883601 -237372982 + AluSc SINE Alu 1 308 -1 1781 139 0 7 chr2 15884173 15884461 -237372122 - AluJb SINE Alu -1 311 26 386 318 40 0 chr2 15885027 15885153 -237371430 - MIR3 SINE MIR -6 202 72 378 243 18 36 chr2 15887040 15887151 -237369432 + L3 LINE CR1 1312 1420 -157 205 256 0 0 chr2 15887169 15887208 -237369375 - L2 LINE L2 -20 3293 3255 388 285 73 29 chr2 15887233 15887370 -237369213 - MIR3 SINE MIR -63 145 3 1064 207 122 89 chr2 15887383 15887775 -237368808 - MLT1G1 LTR MaLR -98 497 93 2181 144 58 32 chr2 15887976 15888512 -237368071 - MLT2A2 LTR ERVL 0 554 3 199 364 82 0 chr2 15888517 15888627 -237367956 - L2 LINE L2 -575 2739 2621 313 319 64 0 chr2 15889239 15889333 -237367250 - MLT1G1 LTR MaLR -489 106 7 1700 230 49 37 chr2 15889420 15889489 -237367094 - MER119 DNA MER1_type -38 545 478 216 0 0 0 chr2 15889489 15889513 -237367070 + (TA)n Simple_repeat Simple_repeat 1 24 0 1700 230 49 37 chr2 15889513 15889880 -237366703 - MER119 DNA MER1_type -105 478 71 2030 130 10 0 chr2 15889880 15890188 -237366395 + AluSq SINE Alu 1 311 -2 1700 230 49 37 chr2 15890188 15890260 -237366323 - MER119 DNA MER1_type -512 71 1 2239 103 0 0 chr2 15890705 15891006 -237365577 + AluSx SINE Alu 2 302 -10 2758 128 25 11 chr2 15892173 15892292 -237364291 - L1PA16 LINE L1 0 6166 6050 2453 44 0 0 chr2 15892292 15892588 -237363995 - AluY SINE Alu -15 296 1 2758 128 25 11 chr2 15892588 15892913 -237363670 - L1PA16 LINE L1 -116 6050 5716 200 125 125 0 chr2 15892918 15892958 -237363625 - MIR SINE MIR -62 146 102 1977 127 0 0 chr2 15894117 15894423 -237362160 - AluSq SINE Alu 0 306 1 200 139 0 23 chr2 15894712 15894755 -237361828 + (TCC)n Simple_repeat Simple_repeat 1 42 0 232 108 0 0 chr2 15894809 15894846 -237361737 - MIR SINE MIR -67 141 105 186 397 25 0 chr2 15895047 15895168 -237361415 + MIR SINE MIR 114 237 -25 1119 236 63 0 chr2 15895202 15895439 -237361144 + MIR SINE MIR 10 261 -1 1277 177 104 19 chr2 15895590 15895850 -237360733 + AluJo SINE Alu 1 282 -30 22 0 0 0 chr2 15895850 15895872 -237360711 + AT_rich Low_complexity Low_complexity 1 22 0 268 333 99 58 chr2 15895931 15896243 -237360340 - L2 LINE L2 -6 3266 2942 282 313 72 45 chr2 15897007 15897254 -237359329 + MIR3 SINE MIR 5 253 -9 304 299 112 19 chr2 15897349 15897456 -237359127 - L2 LINE L2 0 3272 3156 2518 107 13 16 chr2 15897693 15898067 -237358516 - THE1C LTR MaLR -2 373 1 4646 131 33 11 chr2 15898067 15898800 -237357783 - THE1C-int LTR MaLR 0 1580 832 192 298 18 0 chr2 15899509 15899566 -237357017 - L3 LINE CR1 -5 1572 1515 1597 186 9 25 chr2 15899616 15899939 -237356644 - 7SLRNA srpRNA srpRNA -1 319 2 679 226 66 104 chr2 15899976 15900264 -237356319 - L2 LINE L2 0 3313 3037 2266 105 0 0 chr2 15900389 15900695 -237355888 + AluSg SINE Alu 1 306 -4 191 279 39 126 chr2 15900772 15900799 -237355784 + MIR SINE MIR 8 36 -226 2082 110 0 7 chr2 15900799 15901091 -237355492 + AluSx SINE Alu 1 290 -22 191 279 39 126 chr2 15901091 15901125 -237355458 + MIR SINE MIR 36 71 -191 2307 84 3 0 chr2 15901125 15901424 -237355159 + AluSp SINE Alu 1 300 -13 191 279 39 126 chr2 15901424 15901562 -237355021 + MIR SINE MIR 71 184 -78 1523 174 4 7 chr2 15901562 15901838 -237354745 - AluJb SINE Alu -37 275 1 191 279 39 126 chr2 15901838 15901890 -237354693 + MIR SINE MIR 184 239 -23 297 305 63 42 chr2 15902670 15902832 -237353751 + MIR3 SINE MIR 20 187 -21 1855 201 0 79 chr2 15902908 15903069 -237353514 + MSTD LTR MaLR 3 175 -221 4957 96 39 0 chr2 15903069 15903734 -237352849 + LTR8 LTR ERV1 1 691 0 1855 201 0 79 chr2 15903734 15903918 -237352665 + MSTD LTR MaLR 175 310 -86 2311 87 3 0 chr2 15903918 15904230 -237352353 + AluSp SINE Alu 1 313 0 1855 201 0 79 chr2 15904230 15904311 -237352272 + MSTD LTR MaLR 310 396 0 333 316 66 0 chr2 15904316 15904452 -237352131 + MIR SINE MIR 47 191 -71 205 281 31 0 chr2 15904646 15904710 -237351873 + L2 LINE L2 3246 3311 -2 311 175 78 117 chr2 15905677 15905737 -237350846 - MER81 DNA DNA 0 114 58 2079 114 3 0 chr2 15905737 15906044 -237350539 + AluSx SINE Alu 1 308 -4 311 175 78 117 chr2 15906044 15906086 -237350497 - MER81 DNA DNA -56 58 16 2169 97 3 0 chr2 15906646 15906954 -237349629 + AluSx SINE Alu 1 309 -3 2081 108 3 0 chr2 15907838 15908156 -237348427 + AluSq SINE Alu 1 319 0 821 205 0 0 chr2 15909147 15909303 -237347280 + AluSg/x SINE Alu 120 275 -35 20073 51 3 1 chr2 15909305 15912576 -237344007 + L1PA5 LINE L1 2875 6149 -5 26 0 0 0 chr2 15912577 15912603 -237343980 + AT_rich Low_complexity Low_complexity 1 26 0 318 185 380 0 chr2 15912606 15912698 -237343885 + MER5B DNA MER1_type 49 175 -3 279 362 43 5 chr2 15912726 15912911 -237343672 + L2 LINE L2 2275 2466 -848 425 244 215 29 chr2 15913401 15913610 -237342973 + MIR SINE MIR 7 254 -8 1876 139 0 23 chr2 15913613 15913915 -237342668 - AluJb SINE Alu -17 295 1 24 0 0 0 chr2 15913921 15913945 -237342638 + AT_rich Low_complexity Low_complexity 1 24 0 232 254 70 0 chr2 15914241 15914312 -237342271 + MIR SINE MIR 121 196 -66 180 175 140 70 chr2 15914374 15914431 -237342152 - MIR SINE MIR -65 197 137 1549 212 107 21 chr2 15915217 15915647 -237340936 - MLT1C LTR MaLR 0 467 1 2463 51 0 0 chr2 15915667 15915963 -237340620 - AluY SINE Alu -15 296 1 321 293 70 38 chr2 15915966 15916123 -237340460 - L2 LINE L2 -10 3262 3101 1972 144 0 6 chr2 15916438 15916751 -237339832 - AluSx SINE Alu -1 311 1 228 274 169 31 chr2 15917960 15918111 -237338472 + MIR SINE MIR 1 156 -65 230 219 0 0 chr2 15918144 15918185 -237338398 - MER69 DNA AcHobo -954 272 232 * 5864 133 37 47 chr2 15918183 15918950 -237337633 - Tigger1 DNA MER2_type -1406 1012 256 2382 81 10 0 chr2 15918950 15919260 -237337323 + AluSq SINE Alu 1 313 0 5864 133 37 47 chr2 15919260 15919513 -237337070 - Tigger1 DNA MER2_type -2162 256 2 263 317 29 19 chr2 15920281 15920385 -237336198 + MIR SINE MIR 30 134 -74 1555 194 10 0 chr2 15920607 15920901 -237335682 + AluJb SINE Alu 1 297 -15 208 348 104 26 chr2 15921541 15921656 -237334927 + MIR3 SINE MIR 7 130 -78 1927 148 3 0 chr2 15921660 15921970 -237334613 - AluSx SINE Alu -1 311 1 346 231 29 29 chr2 15922230 15922334 -237334249 + MIR SINE MIR 49 152 -110 361 174 72 0 chr2 15923461 15923530 -237333053 - MER3 DNA MER1_type 0 209 136 2180 130 28 47 chr2 15923538 15923802 -237332781 + L1MB4 LINE L1 5758 6013 -167 1224 83 193 0 chr2 15923802 15923994 -237332589 - MER30 DNA MER1_type 0 230 2 2180 130 28 47 chr2 15923994 15924153 -237332430 + L1MB4 LINE L1 6013 6173 -7 768 203 44 0 chr2 15924155 15924313 -237332270 - MER3 DNA MER1_type -44 165 1 443 259 40 75 chr2 15925499 15925673 -237330910 - MIR3 SINE MIR -5 203 36 1615 129 4 0 chr2 15925744 15925985 -237330598 - AluSq SINE Alu -14 299 58 1654 101 8 8 chr2 15925986 15926224 -237330359 - AluSx SINE Alu -74 238 1 29 28 0 0 chr2 15926313 15926349 -237330234 + AT_rich Low_complexity Low_complexity 1 36 0 2322 87 0 0 chr2 15926359 15926657 -237329926 + AluY SINE Alu 1 298 -13 353 328 86 11 chr2 15926694 15926880 -237329703 + MIR SINE MIR 20 219 -43 310 297 34 23 chr2 15927123 15927271 -237329312 + MIR SINE MIR 1 144 -67 2163 107 7 0 chr2 15927473 15927772 -237328811 - AluSx SINE Alu -11 301 1 229 297 57 97 chr2 15928083 15928258 -237328325 - L3 LINE CR1 -14 1563 1396 227 100 0 25 chr2 15928283 15928323 -237328260 + (TTTTC)n Simple_repeat Simple_repeat 3 41 0 807 189 0 0 chr2 15928328 15928460 -237328123 - FLAM_C SINE Alu -1 132 1 1832 157 0 13 chr2 15928464 15928777 -237327806 - AluJb SINE Alu -1 311 3 871 253 64 40 chr2 15928859 15929129 -237327454 - MIR SINE MIR 0 262 9 2303 116 3 0 chr2 15929625 15929936 -237326647 - AluSx SINE Alu 0 312 1 261 0 0 0 chr2 15930009 15930038 -237326545 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2245 90 7 0 chr2 15930040 15930319 -237326264 - AluSq SINE Alu -31 282 2 181 208 19 75 chr2 15930638 15930691 -237325892 + L2 LINE L2 3241 3290 -23 209 56 0 56 chr2 15932894 15932930 -237323653 + (TCTCCC)n Simple_repeat Simple_repeat 4 37 0 198 270 0 0 chr2 15932956 15933030 -237323553 + (TG)n Simple_repeat Simple_repeat 1 74 0 529 197 0 22 chr2 15934008 15934191 -237322392 + (TG)n Simple_repeat Simple_repeat 2 180 0 540 204 0 0 chr2 15934219 15934395 -237322188 + (TG)n Simple_repeat Simple_repeat 2 177 0 605 193 0 6 chr2 15934412 15934593 -237321990 + (TG)n Simple_repeat Simple_repeat 1 180 0 537 217 0 0 chr2 15934604 15934784 -237321799 + (TG)n Simple_repeat Simple_repeat 1 180 0 1947 132 0 0 chr2 15935679 15935951 -237320632 - AluSq SINE Alu -24 289 18 479 314 52 13 chr2 15935976 15936129 -237320454 - MIR SINE MIR -12 250 92 2242 91 13 17 chr2 15936762 15937060 -237319523 - AluSx SINE Alu -15 297 1 339 267 104 7 chr2 15937148 15937283 -237319300 + MIR3 SINE MIR 54 201 -7 918 127 0 0 chr2 15937780 15937938 -237318645 + (CA)n Simple_repeat Simple_repeat 1 158 0 2394 96 0 0 chr2 15937960 15938261 -237318322 + AluSg SINE Alu 1 301 -9 339 277 32 0 chr2 15938589 15938683 -237317900 - MIR3 SINE MIR -5 203 107 1549 219 58 11 chr2 15939254 15939601 -237316982 + MLT1A1 LTR MaLR 1 363 -2 2201 118 0 3 chr2 15939605 15939911 -237316672 - AluSx SINE Alu -7 305 1 281 293 0 13 chr2 15939938 15940013 -237316570 - MIR SINE MIR -63 145 72 296 268 60 104 chr2 15940362 15940545 -237316038 + MIR SINE MIR 77 251 -11 2342 107 0 0 chr2 15940887 15941187 -237315396 - AluSx SINE Alu -10 302 3 339 236 0 14 chr2 15941214 15941286 -237315297 + MIR SINE MIR 79 149 -113 963 114 0 0 chr2 15941439 15941570 -237315013 - FLAM_C SINE Alu -2 131 1 213 39 0 0 chr2 15941709 15941735 -237314848 + (GA)n Simple_repeat Simple_repeat 1 26 0 428 247 120 27 chr2 15941736 15941886 -237314697 + MIR SINE MIR 8 171 -91 312 302 0 0 chr2 15942365 15942451 -237314132 + MIR3 SINE MIR 114 199 -9 933 159 7 7 chr2 15942771 15942999 -237313584 + CT-rich Low_complexity Low_complexity 1 228 -339 2362 103 0 13 chr2 15942999 15943310 -237313273 - AluSp SINE Alu -6 307 1 933 159 7 7 chr2 15943310 15943338 -237313245 + CT-rich Low_complexity Low_complexity 227 567 0 2063 154 10 0 chr2 15943338 15943644 -237312939 - AluSx SINE Alu -3 309 1 360 152 0 0 chr2 15943803 15943869 -237312714 + GA-rich Low_complexity Low_complexity 1 66 0 2005 113 0 0 chr2 15943980 15944245 -237312338 + AluSx SINE Alu 5 269 -43 189 0 0 0 chr2 15944272 15944293 -237312290 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 181 343 55 14 chr2 15944619 15944692 -237311891 - L2 LINE L2 -39 3274 3199 294 361 68 8 chr2 15944897 15945030 -237311553 + L2 LINE L2 3124 3264 -8 253 287 93 46 chr2 15945032 15945140 -237311443 - MIR SINE MIR -75 133 21 721 134 29 29 chr2 15945306 15945478 -237311105 + CT-rich Low_complexity Low_complexity 3 174 0 747 180 0 180 chr2 15945548 15945798 -237310785 - AluSp SINE Alu -107 206 2 1755 123 8 0 chr2 15945851 15946095 -237310488 + AluSx SINE Alu 53 298 -14 252 345 88 9 chr2 15946240 15946353 -237310230 - MIR3 SINE MIR -43 165 44 369 43 0 0 chr2 15946368 15946415 -237310168 + (CA)n Simple_repeat Simple_repeat 2 48 0 354 271 47 0 chr2 15947099 15947206 -237309377 - MIR SINE MIR -59 203 92 262 258 237 0 chr2 15947496 15947589 -237308994 + L2 LINE L2 3158 3272 0 * 326 299 95 47 chr2 15947578 15947789 -237308794 - L2 LINE L2 -15 3257 3037 276 256 98 112 chr2 15947763 15948040 -237308543 + L3 LINE CR1 1268 1540 -37 * 2214 126 7 0 chr2 15948069 15948378 -237308205 - AluSp SINE Alu 0 313 3 189 276 0 17 chr2 15948951 15949009 -237307574 - MIR SINE MIR -67 141 85 227 288 0 27 chr2 15949298 15949371 -237307212 - L2 LINE L2 -215 3057 2987 408 269 30 0 chr2 15949379 15949651 -237306932 + (TCCA)n Simple_repeat Simple_repeat 1 280 0 231 224 28 0 chr2 15949671 15949778 -237306805 + (TCCA)n Simple_repeat Simple_repeat 1 110 0 301 225 33 0 chr2 15949793 15949944 -237306639 + (TCCA)n Simple_repeat Simple_repeat 1 156 0 398 258 67 8 chr2 15949999 15950119 -237306464 - MIR SINE MIR -16 246 120 217 360 96 45 chr2 15950211 15950525 -237306058 + L2 LINE L2 2622 2951 -363 1830 194 35 30 chr2 15951098 15951470 -237305113 + MLT1A2 LTR MaLR 1 374 0 229 336 77 0 chr2 15951893 15951997 -237304586 + MIR SINE MIR 33 144 -64 736 205 0 0 chr2 15952303 15952425 -237304158 + AluJo SINE Alu 2 123 -189 186 133 0 0 chr2 15952426 15952456 -237304127 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 1068 193 5 0 chr2 15952467 15952654 -237303929 + AluJo SINE Alu 118 305 -7 222 152 0 65 chr2 15953104 15953150 -237303433 + MIR SINE MIR 210 252 -10 * 300 136 0 0 chr2 15953122 15953166 -237303417 + L2 LINE L2 3270 3313 0 208 143 29 0 chr2 15953612 15953647 -237302936 + GA-rich Low_complexity Low_complexity 1 36 0 369 142 39 39 chr2 15953658 15953813 -237302770 + (CAGAGA)n Simple_repeat Simple_repeat 2 156 0 213 320 48 63 chr2 15954811 15955017 -237301566 + L2 LINE L2 2637 2839 -475 1499 165 8 8 chr2 15956551 15956799 -237299784 + AluJo SINE Alu 33 280 -32 369 306 98 6 chr2 15956975 15957148 -237299435 + MIR SINE MIR 74 262 0 352 199 114 121 chr2 15957545 15957711 -237298872 + MIR SINE MIR 19 183 -79 522 57 0 0 chr2 15958036 15958106 -237298477 + (TTTC)n Simple_repeat Simple_repeat 4 73 0 244 145 0 48 chr2 15958109 15958171 -237298412 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 1186 77 6 17 chr2 15958171 15958352 -237298231 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 1921 151 4 0 chr2 15958353 15958631 -237297952 - AluSx SINE Alu -33 279 1 422 268 183 0 chr2 15958877 15959030 -237297553 + MER5A DNA MER1_type 9 189 0 384 226 9 52 chr2 15959834 15959949 -237296634 - Charlie2 DNA MER1_type -2634 148 39 432 288 30 15 chr2 15959978 15960110 -237296473 - MIR SINE MIR -20 242 109 231 152 38 25 chr2 15960478 15960557 -237296026 + CT-rich Low_complexity Low_complexity 2 81 0 252 305 0 0 chr2 15960961 15961020 -237295563 + L2 LINE L2 3209 3267 -5 2232 125 3 6 chr2 15961246 15961559 -237295024 + AluSx SINE Alu 1 312 0 250 296 148 0 chr2 15961576 15961691 -237294892 + MIR SINE MIR 2 133 -129 221 305 86 19 chr2 15961897 15962002 -237294581 - MIR SINE MIR -74 134 23 274 377 31 8 chr2 15962065 15962195 -237294388 + MIR3 SINE MIR 70 202 -6 261 264 25 83 chr2 15962336 15962457 -237294126 + L2 LINE L2 3151 3264 -8 805 257 8 9 chr2 15962668 15962883 -237293700 - MIR SINE MIR -6 256 42 433 229 53 23 chr2 15962871 15963002 -237293581 - MIR SINE MIR -19 243 109 * 576 200 15 37 chr2 15963081 15963216 -237293367 + MIR SINE MIR 19 150 -112 21 0 0 0 chr2 15963672 15963693 -237292890 + AT_rich Low_complexity Low_complexity 1 21 0 187 336 8 69 chr2 15963937 15964068 -237292515 - L2 LINE L2 -5 3308 3186 190 266 125 0 chr2 15964137 15964201 -237292382 + MIR SINE MIR 84 155 -107 945 248 81 0 chr2 15964204 15964426 -237292157 + MIR SINE MIR 2 241 -21 207 280 65 19 chr2 15964447 15964554 -237292029 + MIR SINE MIR 148 259 -3 623 259 24 6 chr2 15964636 15964806 -237291777 + MER5B DNA MER1_type 3 175 -3 1918 132 63 0 chr2 15964850 15965137 -237291446 - AluSx SINE Alu -7 305 1 729 295 106 73 chr2 15965210 15965930 -237290653 - L2 LINE L2 -9 3304 2499 2193 126 19 43 chr2 15965930 15966303 -237290280 - THE1B LTR MaLR 0 364 1 729 295 106 73 chr2 15966303 15966633 -237289950 - L2 LINE L2 -814 2499 2181 321 336 0 8 chr2 15967089 15967208 -237289375 + MIR3 SINE MIR 70 187 -21 379 239 68 34 chr2 15967656 15967773 -237288810 - L1MC5 LINE L1 -910 7051 6931 308 242 105 52 chr2 15967740 15967802 -237288781 - L1MC4 LINE L1 -969 7073 7016 * 2148 128 23 0 chr2 15967802 15968107 -237288476 - AluSx SINE Alu 0 312 1 308 242 105 52 chr2 15968107 15968132 -237288451 - L1MC4 LINE L1 -1026 7016 6994 1910 109 0 8 chr2 15968132 15968389 -237288194 - AluSg SINE Alu -6 304 50 308 242 105 52 chr2 15968389 15968453 -237288130 - L1MC4 LINE L1 -1048 6994 6913 420 250 158 8 chr2 15968458 15968578 -237288005 - MIR SINE MIR -71 191 54 246 309 136 0 chr2 15968837 15968947 -237287636 - L2 LINE L2 -239 3033 2909 24 32 0 0 chr2 15969299 15969330 -237287253 + AT_rich Low_complexity Low_complexity 1 31 0 245 250 147 22 chr2 15969366 15969502 -237287081 + L1ME4a LINE L1 5636 5788 -333 1862 177 7 0 chr2 15969579 15969889 -237286694 - AluJb SINE Alu 0 312 1 300 196 196 38 chr2 15970006 15970139 -237286444 + L1ME4a LINE L1 5967 6120 -1 243 333 57 57 chr2 15971615 15971774 -237284809 - L2 LINE L2 -2 3270 3112 217 323 118 11 chr2 15972336 15972429 -237284154 - L2 LINE L2 -1 3271 3169 740 161 25 0 chr2 15972614 15972732 -237283851 - FLAM_C SINE Alu -11 122 2 1976 140 0 7 chr2 15972950 15973250 -237283333 - AluSx SINE Alu -14 298 1 2356 110 0 0 chr2 15973460 15973769 -237282814 - AluSx SINE Alu -3 309 1 218 157 20 20 chr2 15974785 15974836 -237281747 + (GAGTG)n Simple_repeat Simple_repeat 1 51 0 191 271 157 0 chr2 15974889 15974959 -237281624 + MIR3 SINE MIR 127 207 -1 614 329 69 0 chr2 15974977 15975266 -237281317 + L1ME4a LINE L1 5566 5874 -247 1914 147 35 0 chr2 15975469 15975754 -237280829 + AluJb SINE Alu 11 305 -7 296 273 127 33 chr2 15977738 15977888 -237278695 - MIR3 SINE MIR -29 179 16 297 208 26 11 chr2 16179538 16179647 -237076936 - AluJ/monomer SINE Alu -253 46 2 2285 82 0 10 chr2 16179877 16180181 -237076402 - AluSx SINE Alu -11 301 1 231 197 28 70 chr2 16180589 16180660 -237075923 + MIR SINE MIR 54 122 -86 310 239 18 64 chr2 16181166 16181275 -237075308 + MIR SINE MIR 43 146 -116 2266 91 0 3 chr2 16181285 16181594 -237074989 - AluSg SINE Alu -2 308 1 202 274 0 0 chr2 16181784 16181835 -237074748 + (TG)n Simple_repeat Simple_repeat 1 51 0 499 325 69 35 chr2 16182185 16182619 -237073964 + L1ME4a LINE L1 5293 5754 -367 1704 147 63 0 chr2 16182619 16182904 -237073679 + AluSx SINE Alu 6 308 -4 499 325 69 35 chr2 16182904 16183066 -237073517 + L1ME4a LINE L1 5754 5909 -212 665 314 114 29 chr2 16184512 16184593 -237071990 + L2 LINE L2 2521 2594 -719 1968 176 52 6 chr2 16184593 16184940 -237071643 + MLT1A1 LTR MaLR 1 363 -2 665 314 114 29 chr2 16184940 16185336 -237071247 + L2 LINE L2 2594 3046 -267 1864 126 0 0 chr2 16185444 16185713 -237070870 + AluSx SINE Alu 2 270 -42 1697 132 0 45 chr2 16186030 16186164 -237070419 + AluJo SINE Alu 9 147 -163 2095 118 14 0 chr2 16186164 16186460 -237070123 + AluSq SINE Alu 2 301 -12 1697 132 0 45 chr2 16186460 16186640 -237069943 + AluJo SINE Alu 147 310 0 216 319 29 14 chr2 16186674 16186743 -237069840 - MIR3 SINE MIR -126 82 13 22 0 0 0 chr2 16186812 16186834 -237069749 + AT_rich Low_complexity Low_complexity 1 22 0 261 247 47 24 chr2 16187778 16187863 -237068720 - MIR SINE MIR -80 128 42 1571 120 12 4 chr2 16188952 16189194 -237067389 + AluJo SINE Alu 63 306 -6 283 335 42 42 chr2 16189627 16189794 -237066789 + MIR3 SINE MIR 33 199 -9 617 212 66 100 chr2 16190194 16190453 -237066130 - MIR SINE MIR 0 262 13 210 346 56 0 chr2 16190605 16190712 -237065871 - L2 LINE L2 0 3272 3160 248 281 16 0 chr2 16190718 16190782 -237065801 - L3 LINE CR1 -174 1403 1339 345 234 37 19 chr2 16190797 16190904 -237065679 + MER94 DNA DNA 18 126 -8 243 306 48 20 chr2 16190948 16191095 -237065488 - L3 LINE CR1 -298 1279 1129 220 328 164 35 chr2 16191499 16191816 -237064767 - L2 LINE L2 -88 3184 2827 208 297 178 10 chr2 16192519 16192620 -237063963 + MIR SINE MIR 40 157 -105 206 325 65 13 chr2 16192622 16192699 -237063884 + MIR SINE MIR 117 197 -65 303 316 85 17 chr2 16193003 16193180 -237063403 + L2 LINE L2 2708 2896 -418 313 260 80 20 chr2 16193642 16193742 -237062841 - MIR SINE MIR -93 169 64 543 256 16 8 chr2 16194728 16194857 -237061726 - MIR SINE MIR -113 149 20 305 336 67 0 chr2 16195123 16195242 -237061341 + L2 LINE L2 3146 3272 0 281 244 139 29 chr2 16195979 16196151 -237060432 + L1ME LINE L1 5592 5782 -339 1963 139 0 0 chr2 16196225 16196526 -237060057 - AluSq SINE Alu -12 301 1 358 219 55 202 chr2 16196728 16197075 -237059508 - L2 LINE L2 -20 3252 2957 2066 115 20 0 chr2 16197418 16197722 -237058861 - AluSg SINE Alu 0 310 1 408 333 213 30 chr2 16197826 16198144 -237058439 - L2 LINE L2 -415 2899 2641 1738 165 0 32 chr2 16198144 16198453 -237058130 + AluJo SINE Alu 1 299 -13 408 333 213 30 chr2 16198453 16199073 -237057510 - L2 LINE L2 -673 2641 1789 1389 205 106 54 chr2 16199380 16199824 -237056759 - MLT1C LTR MaLR 0 467 1 180 0 0 0 chr2 16200509 16200529 -237056054 + (TTGG)n Simple_repeat Simple_repeat 1 20 0 880 153 0 0 chr2 16200531 16200662 -237055921 - FRAM SINE Alu -23 153 23 213 39 0 0 chr2 16201214 16201240 -237055343 + (TTCC)n Simple_repeat Simple_repeat 3 28 0 251 114 23 0 chr2 16201260 16201304 -237055279 + CT-rich Low_complexity Low_complexity 4 48 0 226 250 196 11 chr2 16201548 16201640 -237054943 + MIR SINE MIR 20 128 -80 211 217 0 22 chr2 16201744 16201790 -237054793 + L2 LINE L2 3265 3309 -4 2221 67 7 0 chr2 16202229 16202542 -237054041 + AluSp SINE Alu 1 315 0 222 150 0 0 chr2 16202563 16202603 -237053980 + (TTCCC)n Simple_repeat Simple_repeat 2 41 0 374 274 196 17 chr2 16203174 16203353 -237053230 + MIR SINE MIR 49 259 -3 2155 125 0 3 chr2 16204913 16205226 -237051357 - AluSx SINE Alu 0 312 1 2269 57 0 0 chr2 16205253 16205585 -237050998 - AluY SINE Alu 0 332 1 1651 187 0 10 chr2 16206281 16206586 -237049997 - AluJb SINE Alu -10 302 1 843 134 15 22 chr2 16207665 16207799 -237048784 + FLAM_C SINE Alu 1 133 0 4017 196 18 54 chr2 16207843 16208481 -237048102 - L1MB5 LINE L1 -36 6138 5479 2125 110 3 10 chr2 16208481 16208791 -237047792 - AluSq SINE Alu -3 310 3 4017 196 18 54 chr2 16208791 16209006 -237047577 - L1MB5 LINE L1 -695 5479 5258 1770 162 7 0 chr2 16209006 16209296 -237047287 - AluSx SINE Alu -20 292 1 4017 196 18 54 chr2 16209296 16209646 -237046937 - L1MB5 LINE L1 -916 5258 4964 622 264 38 50 chr2 16210035 16210296 -237046287 - MER46C DNA MER2_type -1 337 80 1175 142 16 129 chr2 16210330 16210640 -237045943 - AluJb SINE Alu -14 298 24 939 159 0 2 chr2 16210648 16210887 -237045696 - AluJb SINE Alu -8 304 22 261 0 0 0 chr2 16210903 16210932 -237045651 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 2064 107 0 0 chr2 16210933 16211213 -237045370 - AluSx SINE Alu -32 280 1 231 169 73 140 chr2 16213234 16213412 -237043171 - L2 LINE L2 -190 3082 2917 317 206 21 202 chr2 16213467 16213533 -237043050 - L1MC4 LINE L1 0 8042 7966 2105 112 7 0 chr2 16213533 16213827 -237042756 - AluSx SINE Alu -16 296 1 317 206 21 202 chr2 16213827 16214003 -237042580 - L1MC4 LINE L1 -76 7966 7844 478 304 37 19 chr2 16214178 16214339 -237042244 - MIR SINE MIR -77 185 22 2005 125 3 28 chr2 16214343 16214663 -237041920 - AluSx SINE Alu 0 312 1 2025 132 0 3 chr2 16214665 16214969 -237041614 - AluSx SINE Alu -8 304 2 354 234 69 86 chr2 16215301 16215476 -237041107 + MIR SINE MIR 61 232 -30 475 262 39 0 chr2 16215707 16215810 -237040773 + L2 LINE L2 3199 3305 -8 2175 101 0 0 chr2 16215818 16216105 -237040478 + AluSq SINE Alu 8 294 -19 573 285 93 36 chr2 16216352 16216427 -237040156 - MLT1I LTR MaLR 0 409 340 1396 195 3 25 chr2 16216427 16216745 -237039838 + AluJo SINE Alu 2 312 0 573 285 93 36 chr2 16216745 16216971 -237039612 - MLT1I LTR MaLR -69 340 91 221 276 112 0 chr2 16217137 16217235 -237039348 - MIR3 SINE MIR -2 206 98 861 173 0 0 chr2 16217326 16217476 -237039107 + FRAM SINE Alu 12 161 -15 221 323 85 80 chr2 16217564 16217765 -237038818 - L2 LINE L2 -40 3232 3031 296 314 29 44 chr2 16218082 16218263 -237038320 - MIR SINE MIR -67 141 3 224 228 18 18 chr2 16218378 16218435 -237038148 + L2 LINE L2 3256 3312 -1 2140 121 0 0 chr2 16218554 16218861 -237037722 - AluY SINE Alu -4 307 1 247 336 84 17 chr2 16218917 16219036 -237037547 + MIR SINE MIR 49 175 -87 234 311 219 12 chr2 16219151 16219315 -237037268 + MIR SINE MIR 6 203 -59 235 208 0 0 chr2 16219727 16219780 -237036803 - MER91A DNA MER1_type -143 53 1 381 330 32 80 chr2 16220867 16221267 -237035316 - L2 LINE L2 -19 3253 2873 204 172 31 31 chr2 16221509 16221573 -237035010 + A-rich Low_complexity Low_complexity 6 69 0 2183 113 0 0 chr2 16221578 16221878 -237034705 + AluSx SINE Alu 1 300 -12 1030 215 14 14 chr2 16222138 16222357 -237034226 + MER20 DNA MER1_type 1 219 0 730 192 96 59 chr2 16222465 16222720 -237033863 + MLT1A2 LTR MaLR 1 351 -23 325 102 70 173 chr2 16223723 16223877 -237032706 - MLT1L LTR MaLR 0 577 449 375 225 23 78 chr2 16224211 16224340 -237032243 - MLT1L LTR MaLR -350 265 144 274 188 10 125 chr2 16225173 16225269 -237031314 - MER69 DNA AcHobo -13 2513 2429 1754 206 74 0 chr2 16225274 16225641 -237030942 + MLT2D LTR ERVL 1 444 -20 518 187 0 27 chr2 16225641 16225894 -237030689 + CT-rich Low_complexity Low_complexity 1 246 0 234 295 26 0 chr2 16225953 16226031 -237030552 - MER69 DNA AcHobo -97 80 1 1101 217 66 37 chr2 16228417 16228810 -237027773 + MLT1C LTR MaLR 8 467 0 23 0 0 0 chr2 16229124 16229147 -237027436 + AT_rich Low_complexity Low_complexity 1 23 0 2701 200 65 42 chr2 16229755 16230466 -237026117 - LTR8A LTR ERV1 0 727 1 1459 260 46 8 chr2 16230521 16231025 -237025558 + LTR28 LTR ERV1 1 1232 -131 336 284 37 0 chr2 16231629 16231710 -237024873 - MLT1G LTR MaLR -195 395 312 202 299 58 35 chr2 16232496 16232583 -237024000 + L2 LINE L2 2976 3064 -208 1261 206 8 4 chr2 16232699 16232952 -237023631 - AluJo SINE Alu -58 254 1 490 282 31 57 chr2 16233367 16233594 -237022989 - L2 LINE L2 -865 2449 2229 481 280 150 5 chr2 16233656 16233849 -237022734 + MLT1J LTR MaLR 89 309 -202 1945 224 35 23 chr2 16233857 16234374 -237022209 - MER39 LTR ERV1 0 707 5 2577 108 14 11 chr2 16234499 16234869 -237021714 - THE1C LTR MaLR -4 371 1 35 24 0 0 chr2 16234883 16234925 -237021658 + AT_rich Low_complexity Low_complexity 1 42 0 3335 191 25 47 chr2 16234928 16235752 -237020831 - L1MD2 LINE L1 -384 5975 5176 1734 150 38 0 chr2 16235752 16236045 -237020538 - AluSx SINE Alu -8 304 1 3335 191 25 47 chr2 16236045 16236128 -237020455 - L1MD2 LINE L1 -1183 5176 5093 289 301 157 30 chr2 16236512 16236678 -237019905 - L2 LINE L2 -6 3307 3121 423 232 27 72 chr2 16236792 16236958 -237019625 + MER45A DNA AcHobo 1 145 -33 1878 191 3 11 chr2 16237364 16237715 -237018868 + MER7A DNA MER2_type 1 346 0 252 282 0 51 chr2 16237744 16237822 -237018761 - MIR SINE MIR -118 144 71 300 250 133 8 chr2 16238599 16238727 -237017856 - MIR SINE MIR -100 162 19 281 302 23 12 chr2 16239707 16239793 -237016790 - MIR SINE MIR -118 144 58 231 321 131 0 chr2 16239804 16239888 -237016695 + MIR3 SINE MIR 62 156 -52 320 348 62 0 chr2 16240045 16240157 -237016426 - L2 LINE L2 -18 3254 3136 2143 92 24 0 chr2 16240175 16240470 -237016113 + AluSq SINE Alu 1 302 -11 1436 154 91 18 chr2 16240483 16240769 -237015814 + AluJo SINE Alu 4 310 -2 240 226 118 43 chr2 16240829 16240922 -237015661 + MIR SINE MIR 76 175 -87 601 240 34 28 chr2 16241207 16241386 -237015197 + MIR SINE MIR 13 192 -70 221 234 21 0 chr2 16241514 16241561 -237015022 + C-rich Low_complexity Low_complexity 2 49 0 563 219 35 0 chr2 16241721 16241835 -237014748 + MIR SINE MIR 75 192 -70 1968 117 0 59 chr2 16242203 16242527 -237014056 + AluSg SINE Alu 1 305 -5 255 264 68 96 chr2 16242549 16242642 -237013941 - MIR SINE MIR 0 262 168 1752 166 0 31 chr2 16242642 16242822 -237013761 - AluJo SINE Alu -2 310 143 2370 65 0 7 chr2 16242822 16243131 -237013452 - AluY SINE Alu -4 307 1 1752 166 0 31 chr2 16243131 16243270 -237013313 - AluJo SINE Alu -169 143 1 255 264 68 96 chr2 16243270 16243426 -237013157 - MIR SINE MIR -94 168 20 436 315 72 52 chr2 16244612 16244917 -237011666 + L2 LINE L2 2920 3230 -42 547 211 163 15 chr2 16244941 16245229 -237011354 - MLT1J2 LTR MaLR -22 424 71 222 260 0 0 chr2 16245267 16245317 -237011266 + L3 LINE CR1 1346 1395 -182 215 296 102 87 chr2 16246515 16246703 -237009880 - L2 LINE L2 0 3272 3082 285 306 33 16 chr2 16246703 16246824 -237009759 + MIR3 SINE MIR 3 125 -83 374 196 118 10 chr2 16246973 16247075 -237009508 - MIR3 SINE MIR -31 177 65 370 251 48 78 chr2 16248055 16248144 -237008439 - MER112 DNA MER1_type -7 253 170 2014 136 0 0 chr2 16248144 16248452 -237008131 + AluSx SINE Alu 1 308 -4 370 251 48 78 chr2 16248452 16248529 -237008054 - MER112 DNA MER1_type -90 170 92 263 313 61 9 chr2 16248675 16248790 -237007793 + MIR SINE MIR 89 209 -53 482 284 0 0 chr2 16249881 16249997 -237006586 - MIR SINE MIR -10 252 137 544 219 19 45 chr2 16250029 16250184 -237006399 + MER63 DNA MER1_type 1 777 -59 337 322 41 33 chr2 16250217 16250338 -237006245 - MIR SINE MIR -84 124 3 351 65 0 0 chr2 16250451 16250497 -237006086 + (CACCC)n Simple_repeat Simple_repeat 2 47 0 190 359 57 19 chr2 16251026 16251132 -237005451 - L2 LINE L2 0 3272 3163 * 250 365 112 17 chr2 16251131 16251309 -237005274 + L2 LINE L2 2865 3059 -213 284 301 26 35 chr2 16251763 16251876 -237004707 - MIR3 SINE MIR -9 199 88 363 244 0 106 chr2 16252182 16252305 -237004278 - MER94 DNA DNA -5 129 20 25793 24 0 7 chr2 16252372 16256198 -237000385 - L1PA3 LINE L1 0 6155 2351 12800 46 79 5 chr2 16256198 16257830 -236998753 - L1P LINE L1 -4389 1757 1 1994 128 0 16 chr2 16258841 16259146 -236997437 + AluJb SINE Alu 13 312 0 735 154 0 0 chr2 16259317 16259453 -236997130 + (TCCA)n Simple_repeat Simple_repeat 2 137 0 291 267 95 26 chr2 16259453 16259569 -236997014 - L2 LINE L2 0 3272 3149 1801 163 3 0 chr2 16259831 16260125 -236996458 - AluJb SINE Alu -17 295 1 359 246 52 52 chr2 16260125 16260259 -236996324 + MIR SINE MIR 91 224 -38 211 288 45 0 chr2 16260267 16260333 -236996250 - L2 LINE L2 0 3272 3204 417 271 111 60 chr2 16260477 16260676 -236995907 - MIR SINE MIR -3 259 51 399 214 201 17 chr2 16261063 16261196 -236995387 - FLAM_A SINE Alu -5 128 3 438 20 0 0 chr2 16261770 16261821 -236994762 + (CAG)n Simple_repeat Simple_repeat 1 51 0 228 163 0 0 chr2 16261821 16261864 -236994719 + (TGAA)n Simple_repeat Simple_repeat 3 45 0 397 238 75 159 chr2 16261957 16262171 -236994412 + MER91A DNA MER1_type 1 196 0 2102 224 8 3 chr2 16262549 16262941 -236993642 - MER70A LTR ERVL 0 472 79 1163 166 9 18 chr2 16262943 16263160 -236993423 - AluJo SINE Alu -14 298 84 422 299 11 48 chr2 16263232 16263419 -236993164 - L2 LINE L2 -3 3310 3131 189 255 78 0 chr2 16264360 16264411 -236992172 - L2 LINE L2 -1 3271 3217 180 301 63 77 chr2 16264515 16264658 -236991925 - L2 LINE L2 -161 3111 2971 232 217 29 58 chr2 16265165 16265234 -236991349 + MIR3 SINE MIR 119 185 -23 230 294 59 25 chr2 16265418 16265537 -236991046 - MIR SINE MIR -68 140 18 211 343 110 23 chr2 16267218 16267437 -236989146 - MIR SINE MIR -16 246 9 225 333 30 20 chr2 16267920 16268019 -236988564 - MIR SINE MIR -22 240 141 2453 198 11 19 chr2 16268389 16268863 -236987720 + MER82 DNA MER2_type 1 470 -183 853 143 0 7 chr2 16268867 16269007 -236987576 + FLAM_C SINE Alu 1 139 -4 565 311 67 0 chr2 16269009 16269189 -236987394 + MER82 DNA MER2_type 447 638 -15 234 0 0 0 chr2 16270316 16270342 -236986241 + (T)n Simple_repeat Simple_repeat 1 26 0 246 295 86 19 chr2 16270787 16270892 -236985691 + MIR SINE MIR 24 135 -73 258 284 27 0 chr2 16272156 16272230 -236984353 - MIR3 SINE MIR -21 187 112 283 287 47 33 chr2 16272578 16272728 -236983855 + MIR3 SINE MIR 20 171 -37 1014 254 35 19 chr2 16273544 16273800 -236982783 - MIR SINE MIR 0 262 3 346 302 149 27 chr2 16275042 16275264 -236981319 - MIR SINE MIR 0 262 14 383 294 118 18 chr2 16276189 16276359 -236980224 + MIR SINE MIR 72 258 -4 4202 160 24 21 chr2 16276399 16277119 -236979464 + MER72 LTR ERV1 1 722 0 2816 242 15 23 chr2 16277281 16277725 -236978858 + MER82 DNA MER2_type 5 444 -209 9310 112 6 0 chr2 16277725 16279004 -236977579 + HSMAR1 DNA Mariner 1 1287 0 2816 242 15 23 chr2 16279004 16279213 -236977370 + MER82 DNA MER2_type 444 653 0 187 350 92 6 chr2 16279275 16279438 -236977145 - L2 LINE L2 -1903 1411 1235 189 0 0 0 chr2 16279651 16279672 -236976911 + (A)n Simple_repeat Simple_repeat 1 21 0 497 276 147 0 chr2 16280053 16280209 -236976374 + MER5A DNA MER1_type 10 188 -1 974 239 96 96 chr2 16281046 16281365 -236975218 - L1ME4a LINE L1 -12 6109 5792 185 222 0 67 chr2 16281365 16281410 -236975173 + L2 LINE L2 3266 3307 -6 974 239 96 96 chr2 16281410 16281982 -236974601 - L1ME4a LINE L1 -329 5792 5170 2018 157 0 0 chr2 16283754 16284059 -236972524 + AluSx SINE Alu 1 305 -7 312 256 65 53 chr2 16286466 16286738 -236969845 - L1ME LINE L1 -551 5570 5297 388 299 46 31 chr2 16287116 16287310 -236969273 + MER117 DNA MER1_type 1 197 0 261 271 139 33 chr2 16287332 16287454 -236969129 - MIR3 SINE MIR -52 156 22 218 180 20 20 chr2 16287940 16287990 -236968593 + (TTAA)n Simple_repeat Simple_repeat 2 51 0 288 327 71 9 chr2 16288224 16288337 -236968246 - L2 LINE L2 -13 3259 3140 2295 115 0 3 chr2 16288358 16288672 -236967911 + AluSq SINE Alu 1 313 0 461 113 0 0 chr2 16288707 16288769 -236967814 - L1PA16 LINE L1 -95 6071 6010 394 116 130 0 chr2 16288769 16288834 -236967749 + L1PA16 LINE L1 6078 6155 -11 1783 174 3 3 chr2 16288896 16289189 -236967394 - AluJb SINE Alu -16 296 4 326 180 16 0 chr2 16289229 16289290 -236967293 - MER2 DNA MER2_type -16 329 268 1146 168 14 5 chr2 16289317 16289526 -236967057 - MER2 DNA MER2_type -134 211 1 546 236 93 33 chr2 16290256 16290438 -236966145 + MIR SINE MIR 68 260 -2 262 309 21 10 chr2 16290524 16290621 -236965962 + MIR3 SINE MIR 99 196 -12 4012 190 62 23 chr2 16290842 16291662 -236964921 + MER21B LTR ERV1 1 852 -11 38 51 0 0 chr2 16292125 16292184 -236964399 + AT_rich Low_complexity Low_complexity 1 59 0 284 264 118 56 chr2 16292201 16292345 -236964238 - MIR SINE MIR -18 244 92 250 271 17 0 chr2 16293019 16293078 -236963505 + C-rich Low_complexity Low_complexity 1 60 0 224 325 174 58 chr2 16293078 16293491 -236963092 - L2 LINE L2 -5 3267 2807 327 318 82 15 chr2 16294187 16294382 -236962201 - MIR SINE MIR -26 236 29 186 296 19 19 chr2 16294445 16294499 -236962084 + MIR SINE MIR 17 70 -192 186 289 72 41 chr2 16294529 16294626 -236961957 + MIR SINE MIR 163 262 0 417 247 112 18 chr2 16295247 16295417 -236961166 - MIR SINE MIR -71 191 6 1847 180 7 0 chr2 16295959 16296259 -236960324 - AluJb SINE Alu -10 302 1 387 0 0 0 chr2 16296262 16296305 -236960278 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 2152 91 4 4 chr2 16296309 16296585 -236959998 - AluSx SINE Alu -24 288 13 859 243 0 20 chr2 16296654 16296856 -236959727 + MER3 DNA MER1_type 12 209 0 26 30 0 0 chr2 16297857 16297890 -236958693 + AT_rich Low_complexity Low_complexity 1 33 0 1128 206 0 0 chr2 16298431 16298620 -236957963 + MER5A DNA MER1_type 1 189 0 2171 121 7 0 chr2 16298655 16298952 -236957631 + AluSx SINE Alu 1 299 -13 215 355 125 34 chr2 16298958 16299279 -236957304 - L2 LINE L2 -568 2746 2397 2220 117 10 0 chr2 16299790 16300097 -236956486 - AluSx SINE Alu -2 310 1 362 280 17 42 chr2 16300097 16300204 -236956379 - MIR3 SINE MIR -10 198 93 543 323 12 36 chr2 16300320 16300571 -236956012 - MIR SINE MIR -17 245 1 345 306 127 52 chr2 16300699 16300872 -236955711 + L2 LINE L2 3077 3262 -10 2333 107 7 0 chr2 16300892 16301202 -236955381 + AluSx SINE Alu 1 312 0 206 260 87 58 chr2 16301234 16301338 -236955245 + L2 LINE L2 3166 3272 0 342 134 0 97 chr2 16301345 16301415 -236955168 + AluS SINE Alu 2 57 -246 302 350 71 7 chr2 16301885 16302025 -236954558 - MIR SINE MIR -94 168 20 426 287 116 12 chr2 16303215 16303379 -236953204 - MIR SINE MIR -19 243 63 2298 74 0 23 chr2 16303387 16303720 -236952863 - AluSg SINE Alu 0 310 1 359 299 28 9 chr2 16304023 16304130 -236952453 + MIR3 SINE MIR 82 190 -18 2085 115 24 3 chr2 16306460 16306748 -236949835 - AluSq SINE Alu -17 296 3 187 31 62 0 chr2 16306955 16306987 -236949596 + T-rich Low_complexity Low_complexity 2 35 0 568 210 153 45 chr2 16307091 16307248 -236949335 + MER5A DNA MER1_type 16 189 0 269 290 84 30 chr2 16307834 16307965 -236948618 - MIR SINE MIR 0 262 125 183 167 24 24 chr2 16308903 16308945 -236947638 - L2 LINE L2 -5 3308 3267 945 230 140 4 chr2 16309166 16309431 -236947152 + MLT1D LTR MaLR 205 505 0 258 288 131 25 chr2 16309692 16309852 -236946731 - L2 LINE L2 -173 3099 2923 203 380 44 32 chr2 16309917 16310075 -236946508 - L2 LINE L2 -498 2816 2657 248 397 47 34 chr2 16310332 16310629 -236945954 + L3 LINE CR1 49 349 -1228 210 37 0 0 chr2 16311460 16311487 -236945096 + (CA)n Simple_repeat Simple_repeat 1 27 0 3111 199 98 32 chr2 16312555 16312697 -236943886 - MER21B LTR ERV1 -2 861 730 204 40 0 0 chr2 16312697 16312722 -236943861 + (CAATT)n Simple_repeat Simple_repeat 2 26 0 3111 199 98 32 chr2 16312722 16313304 -236943279 - MER21B LTR ERV1 -133 730 89 346 405 16 5 chr2 16314699 16314884 -236941699 + MIR SINE MIR 24 210 -52 198 271 106 24 chr2 16314854 16314939 -236941644 + L2 LINE L2 2766 2857 -457 * 194 98 78 20 chr2 16315144 16315246 -236941337 + (TA)n Simple_repeat Simple_repeat 2 109 0 477 34 0 0 chr2 16315627 16315686 -236940897 + (CA)n Simple_repeat Simple_repeat 2 60 0 3625 191 12 21 chr2 16317366 16317566 -236939017 - L1MC2 LINE L1 -2 7764 7564 2378 85 0 0 chr2 16317566 16317860 -236938723 - AluSg SINE Alu -16 294 1 3625 191 12 21 chr2 16317860 16318405 -236938178 - L1MC2 LINE L1 -202 7564 6137 241 325 78 95 chr2 16318624 16319036 -236937547 + L2 LINE L2 2825 3229 -43 539 241 69 0 chr2 16319945 16320061 -236936522 + L1ME4a LINE L1 5519 5642 -479 2681 212 100 111 chr2 16320080 16321117 -236935466 - L1MC5 LINE L1 -33 7928 6883 1962 163 165 11 chr2 16321117 16321553 -236935030 + MLT1D LTR MaLR 3 505 0 2681 212 100 111 chr2 16321553 16321982 -236934601 - L1MC5 LINE L1 -1078 6883 6451 285 98 0 0 chr2 16321988 16322029 -236934554 + (TA)n Simple_repeat Simple_repeat 2 42 0 260 184 0 0 chr2 16322103 16322181 -236934402 - Alu SINE Alu 0 323 246 796 304 73 72 chr2 16322205 16322903 -236933680 - L1M4 LINE L1 -1723 4423 3722 893 200 65 0 chr2 16322903 16323058 -236933525 - FAM SINE Alu -10 165 1 796 304 73 72 chr2 16323058 16323457 -236933126 - L1M4 LINE L1 -2424 3722 3325 284 289 167 4 chr2 16323603 16323842 -236932741 + L1ME4a LINE L1 5733 6010 -111 264 269 0 15 chr2 16324078 16324145 -236932438 + CT-rich Low_complexity Low_complexity 4 69 0 199 266 239 18 chr2 16324220 16324329 -236932254 - L2 LINE L2 -1 3312 3180 689 214 65 13 chr2 16324364 16324518 -236932065 + MER5A DNA MER1_type 2 163 -26 1488 228 21 9 chr2 16324535 16324860 -236931723 - MER58B DNA MER1_type -1 340 12 681 246 146 80 chr2 16324872 16325298 -236931285 - L3 LINE CR1 -174 1403 950 653 322 118 42 chr2 16325477 16326719 -236929864 + L2 LINE L2 1973 3313 0 228 305 195 0 chr2 16326745 16326827 -236929756 + L2 LINE L2 3159 3256 -16 249 274 14 0 chr2 16326844 16326917 -236929666 + (TGAA)n Simple_repeat Simple_repeat 3 76 0 185 252 46 130 chr2 16327448 16327579 -236929004 - L2 LINE L2 -13 3300 3181 186 133 0 0 chr2 16328473 16328503 -236928080 + (TCTA)n Simple_repeat Simple_repeat 1 30 0 266 343 34 46 chr2 16329481 16329656 -236926927 - MIR SINE MIR -55 207 35 2290 99 0 13 chr2 16329907 16330220 -236926363 + AluY SINE Alu 1 309 -2 3891 188 21 6 chr2 16330315 16331032 -236925551 - L1MB2 LINE L1 -1 6170 5443 3362 241 74 44 chr2 16331394 16332561 -236924022 + L1ME1 LINE L1 3974 5228 -938 2099 132 3 28 chr2 16332561 16332879 -236923704 - AluSx SINE Alu -2 310 1 3362 241 74 44 chr2 16332879 16333842 -236922741 + L1ME1 LINE L1 5228 6161 -5 213 320 90 62 chr2 16334078 16334256 -236922327 + MIR3 SINE MIR 9 191 -17 22 0 0 0 chr2 16334284 16334306 -236922277 + AT_rich Low_complexity Low_complexity 1 22 0 1677 283 111 33 chr2 16335328 16335898 -236920685 - L2 LINE L2 -3 3310 2786 1162 234 167 34 chr2 16335898 16336342 -236920241 - MLT1D LTR MaLR -2 503 1 1677 283 111 33 chr2 16336342 16336924 -236919659 - L2 LINE L2 -527 2786 2057 847 197 80 5 chr2 16338166 16338354 -236918229 - MER20 DNA MER1_type -17 202 1 449 289 24 6 chr2 16338362 16338528 -236918055 + MER5A DNA MER1_type 1 169 -20 343 245 10 29 chr2 16338563 16338665 -236917918 + MER5B DNA MER1_type 18 117 -61 343 162 162 66 chr2 16339655 16339791 -236916792 + LTR50 LTR ERVL 1 149 -646 427 263 149 69 chr2 16339917 16340293 -236916290 + LTR33A LTR ERVL 292 523 0 257 354 71 9 chr2 16340308 16340520 -236916063 - L2 LINE L2 -222 3050 2826 250 330 10 0 chr2 16340684 16340781 -236915802 - L2 LINE L2 -572 2742 2645 200 274 110 0 chr2 16340851 16340924 -236915659 + MIR3 SINE MIR 78 158 -50 2134 97 10 35 chr2 16342606 16342897 -236913686 + AluSq SINE Alu 1 285 -28 180 97 0 0 chr2 16342897 16342928 -236913655 + (TTAA)n Simple_repeat Simple_repeat 3 33 0 2134 97 10 35 chr2 16342928 16342946 -236913637 + AluSq SINE Alu 285 302 -11 300 221 44 15 chr2 16343874 16343942 -236912641 + MIR SINE MIR 84 153 -109 506 316 5 38 chr2 16344143 16344352 -236912231 - MIR SINE MIR -59 203 2 208 362 73 59 chr2 16345228 16345401 -236911182 + L2 LINE L2 2539 2708 -606 1485 173 64 0 chr2 16345401 16345680 -236910903 - AluJb SINE Alu 0 314 20 208 362 73 59 chr2 16345680 16345845 -236910738 + L2 LINE L2 2708 2883 -431 209 359 54 0 chr2 16346117 16346209 -236910374 + L2 LINE L2 3208 3304 -9 258 81 0 0 chr2 16346373 16346410 -236910173 + (TG)n Simple_repeat Simple_repeat 1 37 0 183 273 30 0 chr2 16348220 16348286 -236908297 - MIR3 SINE MIR -41 167 100 198 170 21 21 chr2 16349909 16349956 -236906627 + MIR SINE MIR 86 132 -130 207 0 0 0 chr2 16350010 16350033 -236906550 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 2241 108 0 0 chr2 16350044 16350331 -236906252 - AluSx SINE Alu -25 287 1 283 256 85 0 chr2 16350708 16350858 -236905725 + MIR SINE MIR 30 194 -58 1394 107 56 5 chr2 16350998 16351214 -236905369 + MER30 DNA MER1_type 1 227 -3 334 299 8 0 chr2 16353034 16353151 -236903432 - MIR SINE MIR -58 150 33 265 266 6 6 chr2 16354497 16354674 -236901909 + (CATA)n Simple_repeat Simple_repeat 2 178 0 422 286 0 20 chr2 16354676 16354823 -236901760 + (CA)n Simple_repeat Simple_repeat 1 144 0 375 247 0 0 chr2 16354841 16354999 -236901584 + (CA)n Simple_repeat Simple_repeat 1 158 0 22 0 0 0 chr2 16355915 16355937 -236900646 + AT_rich Low_complexity Low_complexity 1 22 0 2481 44 40 0 chr2 16356277 16356575 -236900008 - AluY SINE Alu -1 310 1 814 288 107 36 chr2 16357015 16357428 -236899155 + LTR16A LTR ERVL 4 445 -5 215 59 0 29 chr2 16357862 16357896 -236898687 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 254 289 191 29 chr2 16358783 16358956 -236897627 - MIR3 SINE MIR -3 205 5 3496 126 55 17 chr2 16359596 16360175 -236896408 + MER7C DNA MER2_type 2 602 0 10525 186 39 4 chr2 16360206 16362808 -236893775 + L1MA4A LINE L1 923 3615 -3233 8983 128 6 0 chr2 16362814 16364089 -236892494 + HSMAR1 DNA Mariner 1 1282 -5 10777 172 46 9 chr2 16364094 16364957 -236891626 + L1MA4A LINE L1 3622 4452 -2553 213 39 0 0 chr2 16364957 16364983 -236891600 + (TA)n Simple_repeat Simple_repeat 2 27 0 10777 172 46 9 chr2 16364983 16367384 -236889199 + L1MA4A LINE L1 4452 6997 -8 22 35 0 0 chr2 16367385 16367414 -236889169 + AT_rich Low_complexity Low_complexity 1 29 0 2046 117 10 10 chr2 16367502 16367800 -236888783 + AluSc SINE Alu 3 300 -9 1639 256 157 39 chr2 16368000 16368763 -236887820 - HAL1 LINE L1 -1653 854 2 3210 185 24 26 chr2 16370145 16370565 -236886018 + L1MB3 LINE L1 5497 5917 -266 2139 141 0 0 chr2 16370565 16370869 -236885714 - AluSx SINE Alu -7 305 2 3210 185 24 26 chr2 16370869 16371103 -236885480 + L1MB3 LINE L1 5917 6150 -33 1408 164 13 4 chr2 16371103 16371362 -236885221 + AluJb SINE Alu 50 310 0 272 71 0 0 chr2 16371362 16371404 -236885179 + L1MB4 LINE L1 6139 6180 0 788 191 62 11 chr2 16372122 16372300 -236884283 - MER5A DNA MER1_type 0 189 3 1460 144 104 15 chr2 16372571 16372841 -236883742 + MSTA LTR MaLR 2 295 -133 9530 148 14 22 chr2 16372876 16373378 -236883205 + MSTA-int LTR MaLR 5 510 -1070 207 0 0 0 chr2 16373378 16373401 -236883182 + (CAA)n Simple_repeat Simple_repeat 2 24 0 9530 148 14 22 chr2 16373401 16374481 -236882102 + MSTA-int LTR MaLR 510 1574 -6 1558 180 196 14 chr2 16374487 16374849 -236881734 + MSTA LTR MaLR 1 428 0 2517 87 0 0 chr2 16375524 16375833 -236880750 - AluY SINE Alu -2 309 1 495 311 39 14 chr2 16376064 16376352 -236880231 - L1ME3A LINE L1 -154 5967 5678 443 274 100 66 chr2 16376392 16376943 -236879640 - L1 LINE L1 -1273 4873 4343 2336 103 0 6 chr2 16376943 16377254 -236879329 - AluSq SINE Alu -3 310 2 443 274 100 66 chr2 16377254 16377594 -236878989 - L1 LINE L1 -1803 4343 3943 2261 114 0 0 chr2 16377594 16377900 -236878683 + AluSg SINE Alu 1 306 -4 443 274 100 66 chr2 16377900 16377928 -236878655 - L1 LINE L1 -2203 3943 3917 602 268 150 38 chr2 16377943 16378778 -236877805 - L1 LINE L1 -2479 3667 2740 1901 166 0 22 chr2 16378817 16379130 -236877453 - AluJo SINE Alu -2 310 5 369 298 70 0 chr2 16379439 16379597 -236876986 - L1 LINE L1 -3537 2609 2441 2167 113 0 0 chr2 16379828 16380135 -236876448 - AluSx SINE Alu 0 307 1 21 57 0 0 chr2 16380224 16380259 -236876324 + AT_rich Low_complexity Low_complexity 1 35 0 889 105 0 15 chr2 16380331 16380464 -236876119 + L1PB1 LINE L1 6020 6150 -1 273 86 52 0 chr2 16380471 16380529 -236876054 + (TA)n Simple_repeat Simple_repeat 2 62 0 394 318 78 31 chr2 16380735 16380949 -236875634 - HAL1 LINE L1 -833 1674 1432 2016 88 3 88 chr2 16380949 16381311 -236875272 + AluY SINE Alu 1 336 0 394 318 78 31 chr2 16381311 16381482 -236875101 - HAL1 LINE L1 -1075 1432 1270 186 43 0 0 chr2 16381516 16381539 -236875044 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 2162 107 7 0 chr2 16381541 16381821 -236874762 - AluSp SINE Alu -31 282 1 339 343 28 28 chr2 16382470 16382613 -236873970 + MIR3 SINE MIR 44 186 -22 627 254 50 28 chr2 16383866 16384077 -236872506 - MER20B DNA MER1_type 0 219 1 272 275 61 84 chr2 16384349 16384480 -236872103 + L2 LINE L2 3145 3272 0 275 209 275 0 chr2 16384749 16384840 -236871743 - MER96 DNA MER1_type? -9 166 51 394 297 78 8 chr2 16384885 16385013 -236871570 - MIR SINE MIR -110 152 16 333 267 20 0 chr2 16385024 16385125 -236871458 + MER5C DNA MER1_type 26 128 -196 185 205 103 26 chr2 16385178 16385256 -236871327 + MER5C DNA MER1_type 241 324 0 22 56 0 0 chr2 16385374 16385410 -236871173 + AT_rich Low_complexity Low_complexity 1 36 0 262 191 118 88 chr2 16385632 16385768 -236870815 - L1ME LINE L1 -291 5879 5740 393 224 31 10 chr2 16385772 16385870 -236870713 + LTR41 LTR ERVL 2 101 -672 958 223 125 105 chr2 16386023 16386432 -236870151 + LTR41 LTR ERVL 351 767 -6 500 287 121 24 chr2 16386441 16387294 -236869289 - L1ME LINE L1 -425 5739 4802 617 297 94 5 chr2 16387380 16387592 -236868991 - MIR SINE MIR -31 231 1 522 304 130 4 chr2 16387888 16388111 -236868472 + MIR SINE MIR 2 249 -13 697 264 24 6 chr2 16388810 16388977 -236867606 - MIR SINE MIR -8 254 85 377 274 11 0 chr2 16391248 16391343 -236865240 + MER94 DNA DNA 39 134 0 26 88 0 0 chr2 16391643 16391711 -236864872 + AT_rich Low_complexity Low_complexity 1 68 0 383 293 0 32 chr2 16391865 16392009 -236864574 - L1M4 LINE L1 -1091 5055 4916 757 277 106 43 chr2 16392250 16392976 -236863607 - L1M4 LINE L1 -1404 4742 3971 1559 181 20 3 chr2 16393037 16393335 -236863248 - L1MA4 LINE L1 -20 6280 5978 230 204 20 0 chr2 16393478 16393527 -236863056 + (TATG)n Simple_repeat Simple_repeat 2 51 0 3891 226 167 37 chr2 16393641 16395001 -236861582 - L1MD3 LINE L1 0 7995 6459 1977 139 7 3 chr2 16395154 16395442 -236861141 - AluJb SINE Alu -23 289 1 418 294 14 28 chr2 16396070 16396213 -236860370 + CT-rich Low_complexity Low_complexity 4 144 0 492 297 73 10 chr2 16396216 16396408 -236860175 + MIR SINE MIR 47 250 -12 1825 193 20 50 chr2 16397242 16397642 -236858941 - MLT1B LTR MaLR 0 390 3 246 293 233 13 chr2 16398881 16399031 -236857552 + MIR SINE MIR 15 197 -65 334 282 9 18 chr2 16399037 16399147 -236857436 + MIR SINE MIR 56 164 -98 228 222 139 83 chr2 16399179 16399287 -236857296 + MIR SINE MIR 149 262 0 1249 196 80 3 chr2 16399658 16399784 -236856799 + MER33 DNA MER1_type 1 116 -2469 1826 171 13 3 chr2 16399784 16400088 -236856495 + AluJo SINE Alu 1 307 -5 1249 196 80 3 chr2 16400088 16400262 -236856321 + MER33 DNA MER1_type 116 324 0 286 270 44 80 chr2 16400510 16400647 -236855936 + L2 LINE L2 2919 3050 -222 2141 132 0 28 chr2 16401224 16401543 -236855040 - AluSx SINE Alu -2 310 1 302 324 48 28 chr2 16402028 16402173 -236854410 + HAL1 LINE L1 1287 1434 -1073 2296 105 0 0 chr2 16402260 16402554 -236854029 - AluSq SINE Alu -17 296 3 361 322 25 89 chr2 16402748 16403233 -236853350 + L1ME LINE L1 5316 5769 -352 32 67 0 0 chr2 16403235 16403295 -236853288 + AT_rich Low_complexity Low_complexity 1 60 0 1646 264 90 40 chr2 16403532 16404480 -236852103 - L2 LINE L2 0 3313 2305 2375 111 18 12 chr2 16404722 16405055 -236851528 - L1PA10 LINE L1 -4 6164 5830 509 257 78 5 chr2 16405055 16405273 -236851310 - L1M4 LINE L1 -2753 3393 3160 242 244 64 26 chr2 16405285 16405363 -236851220 + MIR SINE MIR 170 250 -12 271 197 14 56 chr2 16405846 16405917 -236850666 + MER91 DNA MER1_type 73 140 0 643 266 121 8 chr2 16406195 16406567 -236850016 + L1ME4a LINE L1 5705 6118 -3 227 353 134 10 chr2 16407171 16407372 -236849211 + MIR SINE MIR 14 239 -23 363 331 135 0 chr2 16408040 16408218 -236848365 - MIR SINE MIR -16 246 45 189 74 0 0 chr2 16409093 16409120 -236847463 + (TTAA)n Simple_repeat Simple_repeat 1 27 0 215 263 58 73 chr2 16409122 16409259 -236847324 + MIR3 SINE MIR 10 144 -64 317 299 98 17 chr2 16409783 16409957 -236846626 - MER5A DNA MER1_type -1 188 1 187 238 225 0 chr2 16409985 16410065 -236846518 - MIR3 SINE MIR -8 200 103 1510 193 25 0 chr2 16410447 16410722 -236845861 + AluJo SINE Alu 11 292 -20 2174 107 10 3 chr2 16410724 16411022 -236845561 + AluSq SINE Alu 1 300 -13 228 348 115 20 chr2 16411210 16411515 -236845068 + L2 LINE L2 1615 1948 -1366 201 261 60 82 chr2 16411503 16411637 -236844946 + MIR SINE MIR 120 250 -12 * 363 169 0 0 chr2 16412124 16412195 -236844388 + (TG)n Simple_repeat Simple_repeat 1 71 0 275 258 75 21 chr2 16412590 16412683 -236843900 + MIR SINE MIR 50 147 -61 297 307 86 14 chr2 16412697 16412837 -236843746 - L2 LINE L2 -1 3271 3122 406 303 173 40 chr2 16412858 16413426 -236843157 - L2 LINE L2 -823 2491 1849 816 65 0 0 chr2 16413544 16413651 -236842932 + (TTCC)n Simple_repeat Simple_repeat 1 107 0 4606 88 0 5 chr2 16413651 16414250 -236842333 - L1PB1 LINE L1 -13 6138 5543 244 184 0 26 chr2 16417614 16417690 -236838893 + (CA)n Simple_repeat Simple_repeat 2 75 0 441 136 36 28 chr2 16418117 16418376 -236838207 + (CA)n Simple_repeat Simple_repeat 1 261 0 264 115 80 0 chr2 16418440 16418553 -236838030 + (CA)n Simple_repeat Simple_repeat 2 123 0 328 114 57 40 chr2 16418588 16418764 -236837819 + (CA)n Simple_repeat Simple_repeat 2 180 0 504 102 73 0 chr2 16418828 16419081 -236837502 + (CA)n Simple_repeat Simple_repeat 1 271 0 282 124 74 0 chr2 16419097 16419218 -236837365 + (CA)n Simple_repeat Simple_repeat 2 131 0 246 214 51 10 chr2 16419230 16419328 -236837255 + (CA)n Simple_repeat Simple_repeat 1 102 0 248 0 31 0 chr2 16419394 16419426 -236837157 + (CA)n Simple_repeat Simple_repeat 2 34 0 454 230 24 24 chr2 16419660 16419825 -236836758 + (CA)n Simple_repeat Simple_repeat 1 165 0 319 231 57 46 chr2 16420190 16420299 -236836284 + MIR SINE MIR 42 150 -62 22 0 0 0 chr2 16420376 16420398 -236836185 + AT_rich Low_complexity Low_complexity 1 22 0 212 245 0 0 chr2 16420538 16420587 -236835996 + T-rich Low_complexity Low_complexity 1 49 0 288 267 0 13 chr2 16421216 16421291 -236835292 + L2 LINE L2 3198 3271 -1 2272 113 3 0 chr2 16423236 16423545 -236833038 + AluSg SINE Alu 1 310 0 221 208 52 31 chr2 16424002 16424098 -236832485 - L3b LINE CR1 -207 1376 1279 339 217 22 28 chr2 16424552 16424732 -236831851 + (TA)n Simple_repeat Simple_repeat 2 180 0 333 274 219 0 chr2 16424787 16424951 -236831632 - MIR SINE MIR -56 206 7 1368 77 0 0 chr2 16425078 16425248 -236831335 + AluY SINE Alu 130 299 -12 301 226 147 10 chr2 16425378 16425480 -236831103 - L2 LINE L2 -2 3311 3196 379 229 42 2 chr2 16426120 16426235 -236830348 - MIR SINE MIR -62 146 37 237 286 0 0 chr2 16426629 16426692 -236829891 + (TCCA)n Simple_repeat Simple_repeat 4 66 0 247 361 57 25 chr2 16426698 16426856 -236829727 - L2 LINE L2 0 3272 3110 204 313 109 47 chr2 16427667 16428056 -236828527 - L2 LINE L2 -238 3034 2606 266 301 124 9 chr2 16429113 16429226 -236827357 - MIR3 SINE MIR -41 167 42 2061 144 102 3 chr2 16429336 16429689 -236826894 - MLT1B LTR MaLR -2 388 1 300 287 70 38 chr2 16429823 16429980 -236826603 - MIR SINE MIR -49 213 52 203 147 29 0 chr2 16431646 16431680 -236824903 + L2 LINE L2 3255 3289 -24 352 268 130 7 chr2 16431832 16431970 -236824613 + MIR SINE MIR 104 258 -4 231 359 35 47 chr2 16433831 16434001 -236822582 - MIR SINE MIR -70 192 25 210 220 0 0 chr2 16434086 16434145 -236822438 + (CAT)n Simple_repeat Simple_repeat 1 59 0 867 183 0 0 chr2 16434194 16434374 -236822209 + (CAT)n Simple_repeat Simple_repeat 1 180 0 559 71 24 0 chr2 16434888 16434972 -236821611 - L1PB2 LINE L1 -3 6148 6063 857 244 62 0 chr2 16435126 16435335 -236821248 + MER58A DNA MER1_type 3 224 0 2853 253 107 75 chr2 16435341 16435999 -236820584 + L2 LINE L2 1486 2122 -1191 915 203 184 44 chr2 16435999 16436319 -236820264 - MLT1A1 LTR MaLR 0 365 1 2853 253 107 75 chr2 16436319 16437436 -236819147 + L2 LINE L2 2122 3313 0 302 352 49 6 chr2 16437951 16438113 -236818470 + MIR SINE MIR 23 191 -71 180 278 151 48 chr2 16438526 16438652 -236817931 - MIR3 SINE MIR -68 140 2 2367 85 7 3 chr2 16438711 16439018 -236817565 + AluSq SINE Alu 1 308 -5 820 174 29 17 chr2 16439063 16439235 -236817348 + MLT1A1 LTR MaLR 3 176 -189 2854 178 11 15 chr2 16439455 16439990 -236816593 - L1MA6 LINE L1 -6 6294 5762 387 225 83 138 chr2 16439995 16440163 -236816420 - L2 LINE L2 -7 3306 3163 1926 148 7 0 chr2 16440163 16440447 -236816136 + AluSx SINE Alu 1 286 -26 387 225 83 138 chr2 16440447 16440603 -236815980 - L2 LINE L2 -150 3163 3000 21 36 0 0 chr2 16440603 16440631 -236815952 + AT_rich Low_complexity Low_complexity 1 28 0 253 331 41 8 chr2 16440749 16440870 -236815713 - L3 LINE CR1 -142 1435 1311 806 262 99 60 chr2 16440870 16441252 -236815331 + MLT1J2 LTR MaLR 1 397 -53 223 241 17 17 chr2 16441568 16441626 -236814957 + L2 LINE L2 3215 3272 0 2586 44 0 19 chr2 16443446 16443763 -236812820 - AluY SINE Alu 0 311 1 185 116 43 101 chr2 16443816 16443885 -236812698 - L2 LINE L2 -95 3218 3154 432 323 80 67 chr2 16444233 16444863 -236811720 - L2 LINE L2 -39 3233 2542 480 321 96 65 chr2 16444863 16445627 -236810956 + L1M4 LINE L1 4134 4920 -1226 194 308 93 9 chr2 16447284 16447391 -236809192 - MIR SINE MIR -13 249 134 579 246 153 5 chr2 16448202 16448405 -236808178 - MLT1L LTR MaLR -339 276 44 256 324 0 0 chr2 16448693 16448764 -236807819 - MIR SINE MIR -132 130 60 1618 229 106 1 chr2 16448816 16449277 -236807306 - MLT1F1 LTR MaLR 0 542 1 273 341 64 70 chr2 16452427 16452785 -236803798 - L2 LINE L2 0 3272 2917 400 228 343 14 chr2 16453102 16453321 -236803262 - MER5C DNA MER1_type -2 322 32 256 335 130 31 chr2 16454013 16454241 -236802342 + L2 LINE L2 2077 2281 -1033 2327 195 71 25 chr2 16454241 16454722 -236801861 + MLT1D LTR MaLR 3 505 0 256 335 130 31 chr2 16454722 16454878 -236801705 + L2 LINE L2 2281 2499 -815 183 288 68 14 chr2 16454901 16454974 -236801609 + L2 LINE L2 2764 2840 -474 318 313 102 54 chr2 16455054 16455348 -236801235 + L2 LINE L2 2956 3263 -9 363 245 43 0 chr2 16455585 16455679 -236800904 - MIR SINE MIR 0 262 165 646 252 7 0 chr2 16455769 16455908 -236800675 - MIR SINE MIR -120 142 3 266 323 100 8 chr2 16455976 16456106 -236800477 - L2 LINE L2 0 3313 3172 252 366 29 23 chr2 16456776 16456948 -236799635 + MIR SINE MIR 47 219 -43 223 178 0 0 chr2 16457052 16457097 -236799486 - L2 LINE L2 0 3313 3269 225 269 32 65 chr2 16457647 16457740 -236798843 + MIR SINE MIR 118 207 -55 1548 187 92 38 chr2 16457770 16458139 -236798444 - MLT1B LTR MaLR -1 389 1 1286 265 98 70 chr2 16459829 16460129 -236796454 - HAL1 LINE L1 -21 2486 2196 834 244 60 5 chr2 16460129 16460330 -236796253 + MER58C DNA MER1_type 3 214 -1 1286 265 98 70 chr2 16460330 16460968 -236795615 - HAL1 LINE L1 -311 2196 1522 404 351 176 28 chr2 16461071 16461458 -236795125 - HAL1 LINE L1 -1757 750 307 195 266 153 95 chr2 16461774 16462015 -236794568 - L2 LINE L2 -4 3268 3014 469 299 48 39 chr2 16462260 16462491 -236794092 - MIR SINE MIR -25 237 5 268 310 136 11 chr2 16463590 16463774 -236792809 - MIR SINE MIR -16 246 40 207 0 0 0 chr2 16464535 16464558 -236792025 + (TA)n Simple_repeat Simple_repeat 1 23 0 2103 123 0 13 chr2 16464559 16464867 -236791716 + AluSx SINE Alu 1 304 -8 24 0 0 0 chr2 16464994 16465018 -236791565 + AT_rich Low_complexity Low_complexity 1 24 0 399 294 94 71 chr2 16465815 16466155 -236790428 + L2 LINE L2 2907 3254 -18 255 323 10 0 chr2 16466340 16466439 -236790144 - MER117 DNA MER1_type -96 101 2 323 265 7 143 chr2 16467264 16467411 -236789172 - MER91C DNA MER1_type -13 127 1 27 62 0 0 chr2 16467626 16467674 -236788909 + AT_rich Low_complexity Low_complexity 1 48 0 1179 242 5 96 chr2 16467759 16468156 -236788427 - MLT1A2 LTR MaLR -13 361 1 506 288 50 3 chr2 16468203 16468407 -236788176 + MLT1F1 LTR MaLR 7 285 -282 354 259 83 102 chr2 16468697 16469010 -236787573 + MLT1F-int LTR MaLR 1028 1334 -37 1842 248 100 22 chr2 16469025 16469525 -236787058 + MLT1F LTR MaLR 4 542 0 304 305 49 37 chr2 16469608 16469772 -236786811 + MIR3 SINE MIR 24 189 -19 454 234 27 98 chr2 16470049 16470186 -236786397 + MIR SINE MIR 42 164 -98 1725 155 67 67 chr2 16470186 16470518 -236786065 + THE1C LTR MaLR 1 335 -40 2236 125 3 0 chr2 16470518 16470822 -236785761 - AluSq SINE Alu -8 305 1 1725 155 67 67 chr2 16470822 16470864 -236785719 + THE1C LTR MaLR 334 375 0 454 234 27 98 chr2 16470864 16470910 -236785673 + MIR SINE MIR 164 212 -50 203 286 92 107 chr2 16471373 16471579 -236785004 + L2 LINE L2 2994 3196 -76 2847 10 0 0 chr2 16471613 16471920 -236784663 - AluYa5 SINE Alu -4 307 1 222 191 0 0 chr2 16471954 16472001 -236784582 + GA-rich Low_complexity Low_complexity 2 48 0 263 272 136 0 chr2 16472116 16472197 -236784386 - MIR SINE MIR -105 157 66 2950 41 0 9 chr2 16472719 16473061 -236783522 - L1PA5 LINE L1 -2 6152 5814 355 333 41 10 chr2 16473087 16473282 -236783301 + L2 LINE L2 2148 2348 -966 185 318 71 12 chr2 16473441 16473526 -236783057 - MIR SINE MIR -79 129 40 208 235 0 0 chr2 16473781 16473832 -236782751 + (CAA)n Simple_repeat Simple_repeat 1 51 0 243 0 0 0 chr2 16474572 16474599 -236781984 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 187 247 63 134 chr2 16474922 16475145 -236781438 + MIR SINE MIR 47 253 -9 278 264 103 70 chr2 16475281 16475454 -236781129 + MLT1J LTR MaLR 1 156 -294 556 145 0 103 chr2 16475575 16475684 -236780899 + MLT1J LTR MaLR 339 458 -53 2100 110 0 0 chr2 16475684 16475996 -236780587 + AluY SINE Alu 1 312 0 1998 134 20 0 chr2 16475999 16476297 -236780286 + AluSq SINE Alu 1 304 -9 556 145 0 103 chr2 16476297 16476327 -236780256 + MLT1J LTR MaLR 460 468 -43 338 308 51 8 chr2 16476890 16477007 -236779576 - L2 LINE L2 -1 3312 3191 189 273 68 0 chr2 16477071 16477115 -236779468 - L2 LINE L2 -75 3197 3151 233 366 99 30 chr2 16478290 16478421 -236778162 + L2 LINE L2 2600 2739 -575 293 338 51 13 chr2 16479083 16479240 -236777343 - MIR SINE MIR -65 197 35 240 269 30 30 chr2 16479240 16479307 -236777276 + L2 LINE L2 3232 3298 -15 472 287 100 32 chr2 16479409 16479907 -236776676 - L1ME4a LINE L1 -70 6051 5520 887 260 79 62 chr2 16480038 16480512 -236776071 - L1ME LINE L1 -549 5684 5192 2204 121 0 3 chr2 16480512 16480809 -236775774 + AluSc SINE Alu 1 296 -13 887 260 79 62 chr2 16480809 16480953 -236775630 - L1ME LINE L1 -1041 5192 5052 * 1166 270 31 47 chr2 16480951 16481622 -236774961 - L1MEc LINE L1 -3467 2748 2116 2893 251 50 60 chr2 16481660 16481785 -236774798 - L1MEc LINE L1 -4451 1945 1820 1672 174 24 17 chr2 16481785 16482078 -236774505 - AluJb SINE Alu -17 295 1 2893 251 50 60 chr2 16482078 16482878 -236773705 - L1MEc LINE L1 -4576 1820 1013 1822 134 76 10 chr2 16482878 16483169 -236773414 - AluSg SINE Alu 0 310 1 2893 251 50 60 chr2 16483169 16484130 -236772453 - L1MEc LINE L1 -5383 1013 37 242 271 0 0 chr2 16484131 16484190 -236772393 + MER5B DNA MER1_type 115 173 -5 323 303 86 45 chr2 16484204 16484429 -236772154 - L1ME4a LINE L1 -639 5482 5271 1683 172 72 19 chr2 16484431 16484751 -236771832 - MER44D DNA MER2_type 0 609 3 1888 156 175 80 chr2 16485218 16485300 -236771283 - MLT2B1 LTR ERVL 0 520 447 316 21 62 0 chr2 16485300 16485348 -236771235 + (TAGA)n Simple_repeat Simple_repeat 2 52 0 1888 156 175 80 chr2 16485348 16485740 -236770843 - MLT2B1 LTR ERVL -73 447 1 497 243 41 93 chr2 16486136 16486404 -236770179 - L1MCb LINE L1 -5471 574 321 373 328 8 15 chr2 16488076 16488207 -236768376 + MIR SINE MIR 17 146 -62 201 247 43 0 chr2 16489604 16489671 -236766912 - MIR SINE MIR -80 182 113 207 373 0 13 chr2 16489785 16489860 -236766723 + MIR3 SINE MIR 15 88 -120 406 338 63 34 chr2 16489925 16490194 -236766389 + L2 LINE L2 2608 2884 -430 206 329 0 55 chr2 16490520 16490593 -236765990 + L2 LINE L2 3245 3313 0 395 237 44 0 chr2 16491560 16491674 -236764909 + MIR SINE MIR 61 179 -83 377 276 41 0 chr2 16491872 16491970 -236764613 - MER94 DNA DNA -32 102 1 215 248 214 17 chr2 16492754 16492871 -236763712 + MIR3 SINE MIR 62 201 -7 264 240 177 0 chr2 16493039 16493135 -236763448 + L2 LINE L2 3201 3313 0 402 206 14 0 chr2 16493360 16493433 -236763150 + MER2 DNA MER2_type 1 74 -271 5297 140 18 13 chr2 16494257 16495093 -236761490 + L1MC1 LINE L1 5494 6333 0 248 296 169 12 chr2 16496390 16496562 -236760021 - MIR SINE MIR -4 258 60 2358 181 91 44 chr2 16496645 16497080 -236759503 + MLT2B1 LTR ERVL 1 463 -57 279 114 0 0 chr2 16497080 16497124 -236759459 + (TG)n Simple_repeat Simple_repeat 1 44 0 2358 181 91 44 chr2 16497124 16497185 -236759398 + MLT2B1 LTR ERVL 463 520 0 2304 107 7 0 chr2 16497452 16497761 -236758822 + AluSx SINE Alu 1 311 -1 213 355 71 12 chr2 16498214 16498383 -236758200 - MIR SINE MIR 0 262 84 209 303 56 63 chr2 16499116 16499258 -236757325 + MIR SINE MIR 52 192 -70 1909 204 52 12 chr2 16499725 16500126 -236756457 - MSTB LTR MaLR -2 424 8 2117 258 65 21 chr2 16500991 16501666 -236754917 - MER20B DNA MER1_type -14 769 65 370 254 29 43 chr2 16503728 16503866 -236752717 - L1ME LINE L1 -393 5728 5593 308 334 116 36 chr2 16505268 16505608 -236750975 + L2 LINE L2 2624 2997 -275 2008 135 28 0 chr2 16506046 16506335 -236750248 - AluSx SINE Alu -15 297 1 184 261 22 0 chr2 16507897 16507943 -236748640 + L2 LINE L2 3267 3313 0 202 352 0 11 chr2 16508190 16508278 -236748305 + L3 LINE CR1 1289 1375 -202 1932 271 110 27 chr2 16508312 16509020 -236747563 + LTR41 LTR ERVL 1 767 -6 27 29 0 0 chr2 16509353 16509387 -236747196 + AT_rich Low_complexity Low_complexity 1 34 0 493 273 182 16 chr2 16509398 16509585 -236746998 - MIR SINE MIR -16 246 29 268 357 77 58 chr2 16510313 16510638 -236745945 + L2 LINE L2 2942 3272 0 343 368 7 0 chr2 16510673 16510809 -236745774 + MIR3 SINE MIR 72 208 0 2076 150 16 0 chr2 16511426 16511798 -236744785 - AluSx SINE Alu 0 377 1 326 227 30 0 chr2 16512181 16512247 -236744336 - MIR SINE MIR -68 140 73 21 0 0 0 chr2 16512716 16512737 -236743846 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr2 16513487 16513527 -236743056 + AT_rich Low_complexity Low_complexity 1 40 0 315 274 55 62 chr2 16513608 16513754 -236742829 - HAL1 LINE L1 -740 1767 1623 610 249 67 79 chr2 16513770 16513849 -236742734 - HAL1 LINE L1 -976 1531 1453 195 42 0 0 chr2 16513849 16513873 -236742710 + (TC)n Simple_repeat Simple_repeat 1 24 0 610 249 67 79 chr2 16513873 16514007 -236742576 - HAL1 LINE L1 -1054 1453 1319 2034 73 0 22 chr2 16514007 16514279 -236742304 + AluY SINE Alu 1 266 -45 610 249 67 79 chr2 16514279 16514571 -236742012 - HAL1 LINE L1 -1188 1319 1031 22 70 0 0 chr2 16514588 16514631 -236741952 + AT_rich Low_complexity Low_complexity 1 43 0 1292 199 81 75 chr2 16515573 16515945 -236740638 - MLT1A2 LTR MaLR 0 374 1 6830 87 19 0 chr2 16515996 16517120 -236739463 + L1PA14 LINE L1 5023 6159 -2 22 0 0 0 chr2 16517230 16517252 -236739331 + AT_rich Low_complexity Low_complexity 1 22 0 267 300 153 40 chr2 16518297 16518447 -236738136 - MIR3 SINE MIR -23 185 19 1204 256 52 59 chr2 16518478 16518936 -236737647 + L2 LINE L2 2804 3258 -55 281 317 48 75 chr2 16519784 16519970 -236736613 + MIR3 SINE MIR 25 205 -3 183 355 32 0 chr2 16520318 16520411 -236736172 + L2 LINE L2 2942 3037 -235 330 265 151 52 chr2 16521722 16521858 -236734725 - MIR3 SINE MIR -53 155 4 327 298 115 25 chr2 16521938 16522173 -236734410 - LTR33 LTR ERVL -67 454 199 470 233 17 0 chr2 16522206 16522326 -236734257 - LTR33 LTR ERVL -387 134 13 5039 94 5 6 chr2 16522584 16523252 -236733331 - L1PA13 LINE L1 -2 6161 5495 890 276 124 49 chr2 16524361 16525122 -236731461 + L2 LINE L2 2448 3313 0 198 246 70 18 chr2 16525313 16525370 -236731213 + MIR SINE MIR 107 166 -96 247 270 0 0 chr2 16525761 16525824 -236730759 + MIR SINE MIR 161 223 -39 414 335 62 22 chr2 16526386 16526610 -236729973 - MIR SINE MIR -10 252 20 227 308 62 0 chr2 16526856 16526921 -236729662 + MIR3 SINE MIR 116 184 -24 1728 176 43 54 chr2 16527270 16527639 -236728944 - MLT1A1 LTR MaLR 0 365 1 2744 208 75 61 chr2 16528100 16529017 -236727566 - MER63C DNA MER1_type 0 930 1 328 303 55 35 chr2 16529658 16529803 -236726780 - MIR SINE MIR -16 246 99 1917 139 17 7 chr2 16529803 16530104 -236726479 - AluSx SINE Alu -8 304 1 21 36 0 0 chr2 16630551 16630579 -236626004 + GC_rich Low_complexity Low_complexity 1 28 0 2554 105 39 86 chr2 16630629 16631621 -236624962 + SVA Other Other 393 868 -520 3536 72 7 55 chr2 16631703 16632290 -236624293 + SVA Other Other 519 1077 -309 236 68 0 45 chr2 16632803 16632847 -236623736 + (CAAAAA)n Simple_repeat Simple_repeat 4 45 0 187 396 113 17 chr2 16633041 16633579 -236623004 + L2 LINE L2 1821 2410 -904 3274 85 16 5 chr2 16633599 16634036 -236622547 - MLT2A1 LTR ERVL 0 444 3 1256 220 10 0 chr2 16634038 16634334 -236622249 - HERVL LTR ERVL 0 5654 5356 396 310 88 55 chr2 16634532 16634896 -236621687 - L1MEc LINE L1 -2368 4014 3639 312 278 128 39 chr2 16634926 16635207 -236621376 - L1MEc LINE L1 -2794 3588 3283 471 289 30 20 chr2 16635618 16635815 -236620768 + MLT1A2 LTR MaLR 1 199 -175 21 0 0 0 chr2 16635886 16635907 -236620676 + GC_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 16635960 16635985 -236620598 + GC_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr2 16636037 16636058 -236620525 + GC_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 16636086 16636109 -236620474 + GC_rich Low_complexity Low_complexity 1 23 0 296 29 0 0 chr2 16636221 16636255 -236620328 + (G)n Simple_repeat Simple_repeat 1 34 0 412 197 0 22 chr2 16636550 16636687 -236619896 + CT-rich Low_complexity Low_complexity 1 134 0 210 118 0 0 chr2 16637812 16637846 -236618737 + (CA)n Simple_repeat Simple_repeat 1 34 0 1579 158 217 17 chr2 16638232 16638637 -236617946 + MER51A LTR ERV1 1 486 -148 1856 119 58 7 chr2 16639051 16639328 -236617255 - AluSx SINE Alu -20 292 2 543 286 115 24 chr2 16639331 16639865 -236616718 - L2 LINE L2 -161 3152 2579 2149 89 14 3 chr2 16641939 16642231 -236614352 - AluY SINE Alu -14 297 3 203 329 0 14 chr2 16643178 16643248 -236613335 - MIR3 SINE MIR -49 159 91 1979 208 22 7 chr2 16643987 16644435 -236612148 - Tigger1 DNA MER2_type -1963 455 1 1680 228 55 84 chr2 16644440 16645368 -236611215 - L1MEc LINE L1 -3291 3091 2206 363 300 75 6 chr2 16645448 16645608 -236610975 - L1MEc LINE L1 -4271 2113 1943 231 217 109 0 chr2 16645949 16646041 -236610542 + MER76 LTR ERV 114 215 -473 468 138 43 11 chr2 16646066 16646160 -236610423 + MER76 LTR ERV 584 680 -8 232 353 66 0 chr2 16646307 16646429 -236610154 - MIR3 SINE MIR -19 189 60 224 263 128 45 chr2 16646528 16646661 -236609922 - L3 LINE CR1 -414 1163 1020 703 269 33 0 chr2 16646697 16646909 -236609674 + MER20 DNA MER1_type 1 219 0 1866 211 15 19 chr2 16647557 16647969 -236608614 + MER70B LTR ERVL 166 575 -3 240 246 16 0 chr2 16647981 16648042 -236608541 - MER58 DNA MER1_type -123 92 31 930 231 71 19 chr2 16648042 16648350 -236608233 - MLT1I-int LTR MaLR -797 574 251 21 0 0 0 chr2 16648628 16648649 -236607934 + AT_rich Low_complexity Low_complexity 1 21 0 216 0 0 0 chr2 16649276 16649300 -236607283 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2064 149 0 3 chr2 16649334 16649630 -236606953 - AluSx SINE Alu -17 295 1 368 344 24 8 chr2 16650466 16650591 -236605992 + MIR SINE MIR 34 160 -102 425 311 19 30 chr2 16651231 16651501 -236605082 + AluJo SINE Alu 1 267 -45 2290 167 31 7 chr2 16651677 16652121 -236604462 - L1MC2 LINE L1 -426 5918 5464 347 309 13 19 chr2 16653078 16653292 -236603291 + C-rich Low_complexity Low_complexity 1 212 0 302 313 63 78 chr2 16654345 16654677 -236601906 - MLT1I LTR MaLR -2 407 81 406 268 9 36 chr2 16655816 16655928 -236600655 - MIR SINE MIR -135 127 19 238 333 83 9 chr2 16656918 16657026 -236599557 - MIR SINE MIR -80 182 67 274 23 47 0 chr2 16657293 16657336 -236599247 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 220 322 0 0 chr2 16657645 16657704 -236598879 + CT-rich Low_complexity Low_complexity 2 60 0 306 50 0 0 chr2 16658156 16658196 -236598387 + (TG)n Simple_repeat Simple_repeat 2 41 0 351 0 0 0 chr2 16658338 16658377 -236598206 + (ATG)n Simple_repeat Simple_repeat 1 39 0 305 275 0 11 chr2 16658803 16658894 -236597689 - MIR SINE MIR -57 205 116 310 253 121 43 chr2 16659013 16659270 -236597313 - L1M4 LINE L1 -2796 3350 3074 242 277 8 23 chr2 16659297 16659427 -236597156 + T-rich Low_complexity Low_complexity 3 130 0 390 262 29 10 chr2 16659445 16659548 -236597035 - MIR SINE MIR -113 149 45 1364 219 44 25 chr2 16659567 16659928 -236596655 + LTR9 LTR ERV1 245 612 0 1703 169 75 21 chr2 16659937 16660418 -236596165 - MLT2A2 LTR ERVL -44 510 2 352 0 42 0 chr2 16661204 16661252 -236595331 + (TG)n Simple_repeat Simple_repeat 2 51 0 198 317 99 70 chr2 16661430 16661572 -236595011 + MIR SINE MIR 7 152 -110 221 350 0 48 chr2 16662570 16662673 -236593910 + MIR SINE MIR 33 130 -78 354 156 0 0 chr2 16663738 16663802 -236592781 + (CA)n Simple_repeat Simple_repeat 2 65 0 316 250 0 0 chr2 16663833 16663905 -236592678 - MIR SINE MIR -106 156 85 704 234 40 54 chr2 16664301 16664523 -236592060 - MER20 DNA MER1_type 0 219 1 2424 159 34 2 chr2 16664868 16665229 -236591354 + MSTA LTR MaLR 1 378 -50 252 0 0 0 chr2 16665229 16665257 -236591326 + (TA)n Simple_repeat Simple_repeat 1 28 0 2424 159 34 2 chr2 16665257 16665310 -236591273 + MSTA LTR MaLR 378 428 0 1553 188 0 8 chr2 16665470 16665731 -236590852 + AluJo SINE Alu 39 297 -15 188 197 66 33 chr2 16665797 16665858 -236590725 - MIR SINE MIR -2 260 198 1758 220 39 11 chr2 16666788 16667170 -236589413 + MSTD LTR MaLR 4 396 0 199 238 12 24 chr2 16667540 16667624 -236588959 + G-rich Low_complexity Low_complexity 6 88 0 201 349 0 12 chr2 16667625 16667711 -236588872 + GA-rich Low_complexity Low_complexity 2 86 0 453 181 75 30 chr2 16667820 16667953 -236588630 + MSTC LTR MaLR 290 428 0 442 311 221 23 chr2 16668377 16668474 -236588109 - L2 LINE L2 -135 3178 3102 1002 79 0 7 chr2 16668474 16668614 -236587969 - MER85 DNA T2_type 0 139 1 442 311 221 23 chr2 16668614 16669045 -236587538 - L2 LINE L2 -211 3102 2543 353 353 86 11 chr2 16669794 16669981 -236586602 - L1ME3A LINE L1 -8 6162 5962 923 258 20 74 chr2 16670132 16670589 -236585994 - L1MC5 LINE L1 -495 7466 7035 839 215 211 15 chr2 16671983 16672248 -236584335 + MSTD LTR MaLR 1 317 -79 1152 159 171 27 chr2 16672269 16672523 -236584060 + MSTA LTR MaLR 1 306 -69 2415 118 21 16 chr2 16672523 16672896 -236583687 + THE1C LTR MaLR 1 375 0 1152 159 171 27 chr2 16672896 16672978 -236583605 + MSTA LTR MaLR 306 375 0 1263 301 91 60 chr2 16672978 16674390 -236582193 - L2 LINE L2 -32 3281 1820 469 165 173 45 chr2 16674737 16674870 -236581713 + MER3 DNA MER1_type 60 209 0 384 226 60 0 chr2 16674870 16674911 -236581672 - MER3 DNA MER1_type -162 47 2 190 257 95 68 chr2 16675754 16675828 -236580755 - MIR3 SINE MIR -50 158 83 275 331 53 38 chr2 16676294 16676427 -236580156 - L2 LINE L2 -4 3268 3134 260 240 140 10 chr2 16676566 16676666 -236579917 + LTR50 LTR ERVL 104 216 -579 248 185 56 0 chr2 16676692 16676746 -236579837 + LTR50 LTR ERVL 328 384 -411 25 31 0 0 chr2 16676885 16676917 -236579666 + AT_rich Low_complexity Low_complexity 1 32 0 257 284 14 0 chr2 16677001 16677080 -236579503 + HERVL LTR ERVL 559 630 -5024 2204 98 0 44 chr2 16677081 16677397 -236579186 - AluSg SINE Alu -8 302 1 339 332 77 19 chr2 16677526 16677785 -236578798 + HERVL LTR ERVL 858 1131 -4633 805 191 25 0 chr2 16677828 16677990 -236578593 + MLT1D LTR MaLR 340 505 0 250 252 96 35 chr2 16678403 16678518 -236578065 - L2 LINE L2 -227 3086 2965 1969 158 3 0 chr2 16679074 16679384 -236577199 + AluSq SINE Alu 3 313 0 1814 192 0 19 chr2 16680198 16680505 -236576078 + AluJb SINE Alu 1 301 -11 1738 157 4 0 chr2 16680603 16680864 -236575719 + AluSq SINE Alu 1 262 -51 392 196 17 73 chr2 16680879 16681058 -236575525 + (CACCC)n Simple_repeat Simple_repeat 3 171 0 283 306 115 32 chr2 16681781 16681938 -236574645 + MIR SINE MIR 93 262 0 1760 188 35 35 chr2 16682802 16683350 -236573233 + MLT2A2 LTR ERVL 3 554 0 21 0 0 0 chr2 16683369 16683390 -236573193 + AT_rich Low_complexity Low_complexity 1 21 0 1980 199 38 20 chr2 16683437 16683944 -236572639 - L1MB7 LINE L1 -7 6177 5662 726 236 19 34 chr2 16683945 16684208 -236572375 - L1MB7 LINE L1 -1617 4529 4271 415 270 9 0 chr2 16684212 16684327 -236572256 - L1MB7 LINE L1 -2234 3912 3797 208 278 10 0 chr2 16684426 16684523 -236572060 + (TA)n Simple_repeat Simple_repeat 2 99 0 1531 259 38 0 chr2 16684554 16685059 -236571524 - L1MB7 LINE L1 -2367 3779 3256 2231 244 43 31 chr2 16685067 16685144 -236571439 - L1MB7 LINE L1 -2985 3161 3086 2376 87 0 7 chr2 16685144 16685454 -236571129 - AluSx SINE Alu -4 308 1 2231 244 43 31 chr2 16685454 16686072 -236570511 - L1MB7 LINE L1 -3060 3086 2452 258 81 0 0 chr2 16686072 16686109 -236570474 + (TG)n Simple_repeat Simple_repeat 2 38 0 2231 244 43 31 chr2 16686109 16686225 -236570358 - L1MB7 LINE L1 -3694 2452 2339 * 4164 234 72 77 chr2 16686221 16687667 -236568916 - L1M4c LINE L1 -4146 2679 1228 2154 106 0 3 chr2 16687667 16687986 -236568597 - AluSx SINE Alu 0 318 1 4164 234 72 77 chr2 16687986 16688112 -236568471 - L1M4c LINE L1 -5597 1228 1103 231 88 0 0 chr2 16688112 16688146 -236568437 + (TTG)n Simple_repeat Simple_repeat 3 36 0 4164 234 72 77 chr2 16688146 16689077 -236567506 - L1M4c LINE L1 -5722 1103 17 21 36 0 0 chr2 16689091 16689119 -236567464 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 16691280 16691301 -236565282 + AT_rich Low_complexity Low_complexity 1 21 0 12851 176 36 15 chr2 16691660 16691826 -236564757 - L1MA3 LINE L1 -11 7713 7552 2128 123 0 0 chr2 16691826 16692118 -236564465 + AluSg SINE Alu 3 294 -16 12851 176 36 15 chr2 16692118 16695716 -236560867 - L1MA3 LINE L1 -172 7552 3866 451 87 43 0 chr2 16695699 16695768 -236560815 - L1MA3 LINE L1 -3927 3638 3567 * 10792 186 78 31 chr2 16695770 16697402 -236559181 - L1MA3 LINE L1 -4099 3466 2012 7904 97 11 17 chr2 16697402 16699382 -236557201 - L1PA8 LINE L1 0 6172 4198 10792 186 78 31 chr2 16699382 16700860 -236555723 - L1MA3 LINE L1 -5553 2012 605 260 273 67 79 chr2 16700978 16701143 -236555440 + MER103 DNA DNA 3 165 -1 385 336 24 8 chr2 16701629 16701754 -236554829 + MIR SINE MIR 34 160 -102 1554 178 14 14 chr2 16702394 16702681 -236553902 + AluJo SINE Alu 1 287 -25 253 262 85 61 chr2 16703877 16704041 -236552542 - L2 LINE L2 -37 3276 3109 262 338 83 7 chr2 16704350 16704495 -236552088 - MLT1L LTR MaLR -392 223 68 218 306 106 12 chr2 16704503 16704588 -236551995 - L2 LINE L2 -266 3047 2955 306 271 35 0 chr2 16704599 16704684 -236551899 - MIR SINE MIR -8 254 167 1000 139 6 0 chr2 16704686 16704844 -236551739 - MLT2D LTR ERVL -246 168 10 1288 315 192 28 chr2 16704944 16706197 -236550386 + L2 LINE L2 931 2389 -925 281 236 0 14 chr2 16706642 16706714 -236549869 - LTR66 LTR ERVL -172 438 368 867 300 108 27 chr2 16706807 16706941 -236549642 - L2 LINE L2 -9 3304 3182 210 71 0 0 chr2 16706941 16706969 -236549614 + (TAAA)n Simple_repeat Simple_repeat 3 30 0 867 300 108 27 chr2 16706969 16707204 -236549379 - L2 LINE L2 -131 3182 2905 225 398 26 18 chr2 16707616 16707729 -236548854 - L2 LINE L2 -21 3251 3138 211 325 162 0 chr2 16707813 16707930 -236548653 + MIR SINE MIR 62 197 -65 201 333 26 0 chr2 16708778 16708856 -236547727 - L2 LINE L2 0 3313 3234 1696 198 46 48 chr2 16709377 16709624 -236546959 - MLT2D LTR ERVL 0 414 167 1885 169 36 3 chr2 16709624 16709956 -236546627 - MER61A LTR ERV1 0 343 1 1696 198 46 48 chr2 16709956 16710123 -236546460 - MLT2D LTR ERVL -247 167 1 240 167 0 0 chr2 16710271 16710319 -236546264 + (TCCA)n Simple_repeat Simple_repeat 4 51 0 284 193 0 35 chr2 16710434 16710491 -236546092 - MIR3 SINE MIR -27 181 127 26 30 0 0 chr2 16711012 16711045 -236545538 + AT_rich Low_complexity Low_complexity 1 33 0 591 197 98 0 chr2 16711046 16711168 -236545415 - AluJo SINE Alu -178 134 1 22 35 0 0 chr2 16711217 16711246 -236545337 + AT_rich Low_complexity Low_complexity 1 29 0 478 150 24 24 chr2 16713800 16713927 -236542656 + CT-rich Low_complexity Low_complexity 4 130 0 319 301 34 91 chr2 16714824 16715033 -236541550 - MIR SINE MIR -56 206 10 933 223 45 18 chr2 16715761 16715981 -236540602 - MIR SINE MIR -6 256 31 617 135 129 31 chr2 16716091 16716254 -236540329 + MER53 DNA DNA 10 188 -1 382 368 42 10 chr2 16717830 16718023 -236538560 - MIR SINE MIR -63 199 1 188 289 0 0 chr2 16718737 16718782 -236537801 + L3 LINE CR1 1524 1568 -9 4141 138 38 28 chr2 16719359 16720079 -236536504 + MER50 LTR ERV1 1 727 -7 559 284 110 21 chr2 16720113 16720349 -236536234 + MIR SINE MIR 3 259 -3 277 57 0 0 chr2 16720773 16720808 -236535775 - MADE1 DNA Mariner 0 80 46 1582 161 62 4 chr2 16721808 16722082 -236534501 - AluJo SINE Alu -22 290 1 942 191 21 2 chr2 16722431 16722646 -236533937 + L1MA8 LINE L1 5724 5939 -361 705 259 38 34 chr2 16722860 16723324 -236533259 - L1MEc LINE L1 -1949 4266 657 321 367 41 38 chr2 16723528 16723869 -236532714 - L1MEc LINE L1 -5918 478 137 3253 137 16 11 chr2 16724424 16724988 -236531595 + L1PBa LINE L1 1468 2034 -4829 247 368 128 32 chr2 16725170 16725701 -236530882 + L2 LINE L2 2535 3118 -154 311 288 12 0 chr2 16725893 16725973 -236530610 - MIR3 SINE MIR -16 192 112 27 29 0 0 chr2 16726551 16726585 -236529998 + AT_rich Low_complexity Low_complexity 1 34 0 238 150 0 0 chr2 16727050 16727090 -236529493 - LTR67 LTR ERVL -21 536 497 347 322 31 46 chr2 16727098 16727359 -236529224 - MER65A LTR ERV1 -2 443 187 21 0 0 0 chr2 16727792 16727813 -236528770 + AT_rich Low_complexity Low_complexity 1 21 0 299 228 100 118 chr2 16727927 16728251 -236528332 - MER65B LTR ERV1 -146 385 68 1974 124 112 6 chr2 16728251 16728590 -236527993 - THE1C LTR MaLR 0 375 1 299 228 100 118 chr2 16728590 16728656 -236527927 - MER65B LTR ERV1 -463 68 2 263 275 208 20 chr2 16729058 16729207 -236527376 - L2 LINE L2 -25 3288 3112 255 408 8 8 chr2 16729805 16729925 -236526658 + MIR SINE MIR 23 142 -66 251 193 35 0 chr2 16730899 16730956 -236525627 + CT-rich Low_complexity Low_complexity 3 61 0 21 36 0 0 chr2 16731577 16731605 -236524978 + AT_rich Low_complexity Low_complexity 1 28 0 2499 50 3 3 chr2 16732097 16732397 -236524186 - AluY SINE Alu -11 300 1 21 0 0 0 chr2 16733172 16733193 -236523390 + AT_rich Low_complexity Low_complexity 1 21 0 1011 141 17 23 chr2 16733368 16733545 -236523038 - MER2 DNA MER2_type -48 297 122 511 75 88 0 chr2 16733545 16733625 -236522958 - L1MA1 LINE L1 -135 6167 6081 257 36 0 214 chr2 16733625 16733709 -236522874 + L1MA2 LINE L1 6239 6304 0 726 178 0 68 chr2 16733729 16733875 -236522708 - MER2 DNA MER2_type -209 136 1 213 39 0 0 chr2 16733875 16733901 -236522682 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 26 0 0 0 chr2 16733928 16733954 -236522629 + AT_rich Low_complexity Low_complexity 1 26 0 806 271 5 0 chr2 16734471 16734663 -236521920 + MLT1J LTR MaLR 1 193 -318 973 113 60 0 chr2 16734794 16734945 -236521638 - MLT2A1 LTR ERVL 0 444 285 778 79 26 0 chr2 16734945 16735059 -236521524 - MLT2A2 LTR ERVL -336 117 1 27979 73 16 6 chr2 16735059 16738869 -236517714 - HERVL-A2 LTR ERVL 0 5654 1808 279 224 0 13 chr2 16738896 16738972 -236517611 + MLT1J LTR MaLR 427 501 -10 2136 137 50 6 chr2 16738983 16739342 -236517241 + THE1C LTR MaLR 1 375 0 27 0 0 0 chr2 16739948 16739975 -236516608 + AT_rich Low_complexity Low_complexity 1 27 0 1879 153 45 11 chr2 16740286 16740639 -236515944 + L1PB4 LINE L1 5790 6154 -2 1983 173 12 26 chr2 16740694 16741116 -236515467 + Tigger2a DNA MER2_type 12 427 -7 374 315 159 19 chr2 16741190 16741498 -236515085 - L1ME LINE L1 -434 5736 5386 2118 92 0 14 chr2 16741587 16741869 -236514714 - AluY SINE Alu -33 278 1 21 0 0 0 chr2 16741969 16741990 -236514593 + AT_rich Low_complexity Low_complexity 1 21 0 32 26 0 0 chr2 16742414 16742453 -236514130 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr2 16742470 16742492 -236514091 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr2 16742554 16742583 -236514000 + AT_rich Low_complexity Low_complexity 1 29 0 957 233 19 20 chr2 16742652 16742929 -236513654 + MLT2D LTR ERVL 66 342 -72 2094 124 7 0 chr2 16743350 16743660 -236512923 - AluSg SINE Alu 0 312 1 319 231 103 0 chr2 16743684 16743762 -236512821 + L2 LINE L2 3192 3277 -36 2033 112 47 0 chr2 16743981 16744259 -236512324 - AluSx SINE Alu -21 291 1 23 33 0 0 chr2 16744604 16744634 -236511949 + AT_rich Low_complexity Low_complexity 1 30 0 3330 73 35 0 chr2 16744789 16745216 -236511367 + MLT2A1 LTR ERVL 3 444 0 22539 85 12 7 chr2 16745216 16745632 -236510951 + HERVL-A1 LTR ERVL 1 413 -5241 1543 23 0 0 chr2 16745632 16745808 -236510775 + L1PA5 LINE L1 5968 6143 -11 240 35 0 0 chr2 16745809 16745838 -236510745 + (TA)n Simple_repeat Simple_repeat 1 29 0 22539 85 12 7 chr2 16745838 16748570 -236508013 + HERVL-A1 LTR ERVL 412 3168 -2486 1073 81 7 0 chr2 16748566 16748715 -236507868 - HERVL LTR ERVL -3797 1857 1708 * 1197 99 0 0 chr2 16748712 16748883 -236507700 + HERVL-A1 LTR ERVL 3171 3341 -2313 3776 150 42 70 chr2 16748885 16749693 -236506890 - LTR1 LTR ERV1 0 785 1 2696 134 25 16 chr2 16749740 16750189 -236506394 - HUERS-P2 LTR ERV1 -5 3083 2631 1057 86 33 0 chr2 16750264 16750415 -236506168 + LTR1 LTR ERV1 434 589 -196 737 86 0 243 chr2 16750416 16750638 -236505945 + MLT2A1 LTR ERVL 277 444 0 27 0 0 0 chr2 16752526 16752553 -236504030 + AT_rich Low_complexity Low_complexity 1 27 0 760 95 0 95 chr2 16752582 16752719 -236503864 + FLAM_C SINE Alu 20 143 0 26 0 0 0 chr2 16752720 16752746 -236503837 + AT_rich Low_complexity Low_complexity 1 26 0 2053 146 0 31 chr2 16752986 16753308 -236503275 + AluSx SINE Alu 1 312 0 2371 175 39 0 chr2 16753662 16754153 -236502430 - MER45B DNA AcHobo -11 1029 520 558 278 69 0 chr2 16754155 16754328 -236502255 - MER45B DNA AcHobo -703 337 153 309 289 27 52 chr2 16754869 16755103 -236501480 - L1 LINE L1 -1279 4867 4640 462 309 111 36 chr2 16755180 16755487 -236501096 - L1 LINE L1 -1783 4363 4034 24 0 0 0 chr2 16755566 16755590 -236500993 + AT_rich Low_complexity Low_complexity 1 24 0 25 75 0 0 chr2 16755993 16756046 -236500537 + AT_rich Low_complexity Low_complexity 1 53 0 221 224 15 15 chr2 16756366 16756433 -236500150 + T-rich Low_complexity Low_complexity 3 69 0 325 256 53 23 chr2 16756576 16756709 -236499874 - HAL1 LINE L1 -871 1636 1500 1820 180 0 3 chr2 16756848 16757159 -236499424 + AluJo SINE Alu 1 310 -2 339 354 10 29 chr2 16757433 16757639 -236498944 - L1MEd LINE L1 -5047 1072 871 408 65 0 32 chr2 16758033 16758095 -236498488 - Charlie3 DNA MER1_type -8 2702 2643 * 16267 103 9 15 chr2 16758093 16759799 -236496784 - Charlie3 DNA MER1_type -239 2467 778 2076 147 13 32 chr2 16759799 16760179 -236496404 - THE1C LTR MaLR -2 373 1 16267 103 9 15 chr2 16760179 16760908 -236495675 - Charlie3 DNA MER1_type -1928 778 46 436 88 0 0 chr2 16761226 16761294 -236495289 + L1MA3 LINE L1 6238 6305 0 397 214 151 31 chr2 16761299 16761458 -236495125 + L1M4 LINE L1 3023 3200 -2946 271 331 45 64 chr2 16761727 16761884 -236494699 - MIR SINE MIR -108 154 1 274 339 73 23 chr2 16762183 16762360 -236494223 + MIR SINE MIR 50 235 -27 3692 231 51 83 chr2 16762479 16762837 -236493746 + L1M4 LINE L1 2451 2819 -3327 832 81 0 0 chr2 16762837 16762948 -236493635 + AluY SINE Alu 200 310 -1 3692 231 51 83 chr2 16762948 16763800 -236492783 + L1M4 LINE L1 2819 3696 -2450 2384 79 0 0 chr2 16763800 16764092 -236492491 - AluSp SINE Alu -21 292 1 3692 231 51 83 chr2 16764092 16764650 -236491933 + L1M4 LINE L1 3696 4270 -1876 537 187 32 8 chr2 16764667 16764790 -236491793 + L1MB7 LINE L1 6059 6184 0 481 211 16 0 chr2 16766270 16766398 -236490185 + GA-rich Low_complexity Low_complexity 3 132 0 553 259 85 21 chr2 16766607 16766796 -236489787 + MIR SINE MIR 47 247 -15 271 206 130 54 chr2 16767826 16767918 -236488665 + L2 LINE L2 3198 3296 -17 229 286 61 0 chr2 16767932 16768030 -236488553 + L1ME4a LINE L1 5992 6095 -26 410 317 55 18 chr2 16769368 16769532 -236487051 + MIR SINE MIR 21 190 -72 3422 129 27 15 chr2 16770893 16771414 -236485169 + MER1A DNA MER1_type 1 527 0 9284 27 0 8 chr2 16771485 16772696 -236483887 - L1PA3 LINE L1 -2391 3755 2555 13920 23 5 0 chr2 16772696 16775111 -236481472 + L1PA3 LINE L1 3750 6168 0 248 322 56 22 chr2 16775827 16775917 -236480666 + L3 LINE CR1 1279 1371 -206 4525 134 10 34 chr2 16775951 16776320 -236480263 - L1PB4 LINE L1 0 6156 5780 279 0 0 0 chr2 16776320 16776351 -236480232 + (TG)n Simple_repeat Simple_repeat 2 32 0 4525 134 10 34 chr2 16776351 16776812 -236479771 - L1PB4 LINE L1 -376 5780 5346 598 226 52 94 chr2 16777597 16777925 -236478658 - LTR37A LTR ERV1 -2 424 111 219 292 42 41 chr2 16781034 16781223 -236475360 - L2 LINE L2 -302 2970 2791 186 333 0 0 chr2 16781365 16781413 -236475170 - L2 LINE L2 -678 2636 2589 209 221 135 77 chr2 16781453 16781557 -236475026 + L2 LINE L2 3178 3287 -26 312 263 117 23 chr2 16781898 16782069 -236474514 - L1ME3A LINE L1 -222 5948 5762 225 264 107 50 chr2 16782825 16782946 -236473637 + MIR SINE MIR 85 212 -50 1855 194 30 89 chr2 16783141 16783637 -236472946 + MLT1C LTR MaLR 1 467 0 1771 183 3 0 chr2 16783729 16784014 -236472569 + AluJb SINE Alu 2 287 -25 503 322 113 27 chr2 16784103 16784476 -236472107 + L1ME4a LINE L1 5378 5782 -339 707 210 6 54 chr2 16784550 16784670 -236471913 + Charlie1 DNA MER1_type 1 112 -2649 2214 128 0 0 chr2 16784670 16784974 -236471609 - AluSg SINE Alu -6 304 1 707 210 6 54 chr2 16784974 16785020 -236471563 + Charlie1 DNA MER1_type 112 159 -2602 1322 196 99 35 chr2 16785026 16785317 -236471266 + Charlie1 DNA MER1_type 2307 2636 -125 2149 57 45 0 chr2 16785317 16785587 -236470996 + AluY SINE Alu 1 282 -29 282 48 48 0 chr2 16785587 16785629 -236470954 + (TAAA)n Simple_repeat Simple_repeat 2 180 0 1322 196 99 35 chr2 16785629 16785759 -236470824 + Charlie1 DNA MER1_type 2636 2756 -5 311 271 42 0 chr2 16785834 16785952 -236470631 + L1ME4a LINE L1 5992 6114 -7 205 317 195 24 chr2 16786303 16786467 -236470116 - L3 LINE CR1 -11 1566 1375 840 228 0 12 chr2 16786549 16786716 -236469867 - FRAM SINE Alu -10 166 2 187 145 133 72 chr2 16786742 16786825 -236469758 + MIR SINE MIR 145 232 -30 2325 91 3 0 chr2 16787975 16788271 -236468312 + AluSp SINE Alu 1 297 -16 192 152 0 0 chr2 16789168 16789201 -236467382 + (TG)n Simple_repeat Simple_repeat 2 34 0 6151 61 65 13 chr2 16790732 16791881 -236464702 + L1PA7 LINE L1 4969 6150 -4 2412 135 5 13 chr2 16791978 16792356 -236464227 - THE1C LTR MaLR 0 375 1 4666 180 29 3 chr2 16792417 16793920 -236462663 + L1PA16 LINE L1 4628 6166 0 497 249 20 43 chr2 16793925 16794147 -236462436 + L1ME LINE L1 5471 5686 -478 272 310 94 25 chr2 16794308 16794553 -236462030 + HAL1b LINE L1 83 344 -1004 * 318 265 22 38 chr2 16794550 16794735 -236461848 + HAL1b LINE L1 641 822 -526 304 308 53 81 chr2 16795687 16795934 -236460649 + L1M2a LINE L1 344 583 -6585 1021 252 35 46 chr2 16796181 16796681 -236459902 - PABL_B LTR ERV1 -20 647 2 329 258 371 0 chr2 16797356 16797515 -236459068 - MIR SINE MIR -41 221 4 229 294 49 29 chr2 16798208 16798310 -236458273 + L2 LINE L2 3137 3240 -32 383 122 51 0 chr2 16798736 16798834 -236457749 + (TAGA)n Simple_repeat Simple_repeat 4 106 0 1261 188 110 99 chr2 16798843 16798946 -236457637 + MLT1D LTR MaLR 27 127 -378 1971 154 7 0 chr2 16798946 16799239 -236457344 + AluSx SINE Alu 1 295 -17 1261 188 110 99 chr2 16799239 16799609 -236456974 + MLT1D LTR MaLR 127 505 0 1108 187 24 125 chr2 16799615 16799984 -236456599 - MLT1C LTR MaLR 0 390 59 451 357 30 30 chr2 16800199 16800468 -236456115 + L3 LINE CR1 1067 1335 -242 1241 267 65 29 chr2 16800650 16801096 -236455487 - LTR40b LTR ERVL 0 462 1 963 225 15 59 chr2 16801108 16801439 -236455144 - HERVL40 LTR ERVL -8 5522 2803 1254 59 5 48 chr2 16801967 16802154 -236454429 + L1PA11 LINE L1 5994 6172 -2 705 274 82 105 chr2 16802396 16802798 -236453785 - HERVL40 LTR ERVL -613 4671 2036 * 1717 246 28 43 chr2 16802794 16803241 -236453342 - HERVL40 LTR ERVL -1237 4293 3854 1236 153 161 15 chr2 16803241 16803502 -236453081 + AluJo SINE Alu 1 299 -3 1717 246 28 43 chr2 16803502 16803587 -236452996 - HERVL40 LTR ERVL -1676 3854 3769 2095 141 0 3 chr2 16803588 16803900 -236452683 + AluSq SINE Alu 3 313 0 348 246 56 56 chr2 16803902 16804044 -236452539 - HERVL40 LTR ERVL -1747 3783 3642 221 317 12 24 chr2 16804482 16804564 -236452019 - L2 LINE L2 -6 3307 3227 223 191 44 44 chr2 16805003 16805071 -236451512 + (CTTTA)n Simple_repeat Simple_repeat 5 72 0 185 372 58 45 chr2 16805243 16805399 -236451184 - L2 LINE L2 -763 2551 2394 340 315 108 21 chr2 16805464 16805780 -236450803 - L2 LINE L2 -1071 2243 1840 1652 179 47 0 chr2 16805972 16806251 -236450332 - AluJb SINE Alu -8 304 13 2222 116 0 3 chr2 16806868 16807199 -236449384 - AluSg SINE Alu 0 330 1 2312 81 0 0 chr2 16807510 16807817 -236448766 + L1PA8A LINE L1 5807 6113 -18 210 91 0 0 chr2 16807824 16807857 -236448726 + (CATA)n Simple_repeat Simple_repeat 2 34 0 360 0 0 0 chr2 16808973 16809013 -236447570 + (TG)n Simple_repeat Simple_repeat 1 40 0 402 294 132 35 chr2 16809569 16809858 -236446725 - L2 LINE L2 -915 2399 2083 192 239 0 0 chr2 16810578 16810624 -236445959 - MIR SINE MIR -97 111 66 1583 169 33 4 chr2 16810681 16810996 -236445587 - AluJb SINE Alu 0 323 1 385 251 59 39 chr2 16813353 16813556 -236443027 - L1ME2 LINE L1 -9 6155 5949 339 338 70 6 chr2 16813584 16813741 -236442842 - L1MEc LINE L1 -6194 202 36 249 139 0 0 chr2 16814301 16814344 -236442239 + (GGGAA)n Simple_repeat Simple_repeat 3 45 0 715 312 39 13 chr2 16815152 16815383 -236441200 + MIR SINE MIR 3 239 -23 265 246 31 0 chr2 16815383 16815448 -236441135 - MSTC LTR MaLR -356 72 6 1789 166 28 0 chr2 16816003 16816293 -236440290 + AluJb SINE Alu 1 298 -14 202 374 42 24 chr2 16816658 16816824 -236439759 - MIR3 SINE MIR 0 208 40 368 327 0 0 chr2 16817710 16817820 -236438763 - MER81 DNA DNA 0 114 5 1746 150 200 11 chr2 16817826 16818186 -236438397 - MSTA LTR MaLR 0 428 1 1959 104 3 13 chr2 16818186 16818495 -236438088 - MSTA-int LTR MaLR 0 1580 1275 180 0 0 0 chr2 16818695 16818715 -236437868 + (A)n Simple_repeat Simple_repeat 1 20 0 30 0 0 0 chr2 16818815 16818845 -236437738 + AT_rich Low_complexity Low_complexity 1 30 0 40 21 0 0 chr2 16819713 16819760 -236436823 + AT_rich Low_complexity Low_complexity 1 47 0 485 324 163 28 chr2 16820123 16820546 -236436037 + L1MC4a LINE L1 5696 6175 -1633 29 28 0 0 chr2 16820704 16820740 -236435843 + AT_rich Low_complexity Low_complexity 1 36 0 1170 213 46 72 chr2 16820769 16821338 -236435245 + L1MC5 LINE L1 7109 7662 -299 339 235 0 0 chr2 16821368 16821453 -236435130 - MER53 DNA DNA -8 181 97 234 174 0 0 chr2 16821525 16821571 -236435012 + (TA)n Simple_repeat Simple_repeat 1 46 0 410 231 30 41 chr2 16821640 16821809 -236434774 + L1MC5 LINE L1 7719 7885 -76 23 33 0 0 chr2 16821827 16821857 -236434726 + AT_rich Low_complexity Low_complexity 1 30 0 323 302 9 19 chr2 16822488 16822594 -236433989 - MIR3 SINE MIR -54 154 50 13945 142 22 20 chr2 16823684 16824096 -236432487 + Tigger1 DNA MER2_type 1 410 -2008 1278 161 203 0 chr2 16824096 16824362 -236432221 + AluSp SINE Alu 1 314 0 13945 142 22 20 chr2 16824362 16826360 -236430223 + Tigger1 DNA MER2_type 410 2418 0 454 203 17 0 chr2 16826805 16826923 -236429660 + GA-rich Low_complexity Low_complexity 2 121 0 28 61 0 0 chr2 16827184 16827233 -236429350 + AT_rich Low_complexity Low_complexity 1 49 0 2399 180 9 5 chr2 16827500 16827949 -236428634 + LOR1b LTR ERV1 1 451 -10 719 322 142 34 chr2 16827995 16828857 -236427726 - L2 LINE L2 0 3313 2377 22 0 0 0 chr2 16828996 16829018 -236427565 + AT_rich Low_complexity Low_complexity 1 22 0 389 304 104 0 chr2 16829419 16829534 -236427049 + MER91B DNA MER1_type 20 146 -44 475 309 58 16 chr2 16829573 16829764 -236426819 - MIR SINE MIR -60 202 4 6509 51 4 0 chr2 16830825 16831631 -236424952 + L1PA7 LINE L1 5346 6154 0 300 280 247 27 chr2 16831661 16831808 -236424775 + L3 LINE CR1 1060 1258 -319 1232 195 121 76 chr2 16831808 16832295 -236424288 - LTR54 LTR ERV1 -1 509 1 300 280 247 27 chr2 16832295 16832333 -236424250 + L3 LINE CR1 1258 1286 -291 258 203 39 23 chr2 16832346 16832355 -236424228 + (TA)n Simple_repeat Simple_repeat 2 9 -122 207 0 0 0 chr2 16832355 16832378 -236424205 + (TG)n Simple_repeat Simple_repeat 2 24 0 258 203 39 23 chr2 16832378 16832496 -236424087 + (TA)n Simple_repeat Simple_repeat 9 131 0 352 326 90 34 chr2 16832496 16832729 -236423854 + L3 LINE CR1 1292 1537 -40 264 289 148 44 chr2 16833215 16833350 -236423233 - MIR SINE MIR -62 200 52 423 326 143 9 chr2 16833367 16833597 -236422986 + MIR SINE MIR 2 262 0 321 293 33 50 chr2 16833835 16834016 -236422567 + L1ME LINE L1 5098 5275 -871 1365 315 61 54 chr2 16834042 16835077 -236421506 - L2 LINE L2 -5 3308 2272 232 224 0 20 chr2 16835121 16835170 -236421413 + G-rich Low_complexity Low_complexity 1 48 0 641 387 58 17 chr2 16835239 16835601 -236420982 - L2 LINE L2 -2777 537 161 3234 199 29 18 chr2 16836013 16836696 -236419887 + MER54A LTR ERVL 15 894 -7 2228 112 75 26 chr2 16836715 16837062 -236419521 + THE1B LTR MaLR 1 364 0 2042 179 91 17 chr2 16837385 16837848 -236418735 + MLT1D LTR MaLR 2 498 -7 310 345 112 4 chr2 16837995 16838227 -236418356 + L1ME LINE L1 5309 5565 -597 322 237 97 9 chr2 16838479 16838593 -236417990 + L1MA7 LINE L1 6161 6284 -7 1295 247 142 13 chr2 16838658 16839367 -236417216 + L1ME2 LINE L1 5092 5894 -270 1506 183 67 0 chr2 16839367 16839689 -236416894 + AluJb SINE Alu 1 340 0 673 245 13 0 chr2 16839736 16839895 -236416688 + L1ME2 LINE L1 5879 6039 -125 32 26 0 0 chr2 16840205 16840244 -236416339 + AT_rich Low_complexity Low_complexity 1 39 0 2994 235 33 16 chr2 16841233 16841981 -236414602 - L1ME1 LINE L1 -5 6230 5470 1405 260 46 16 chr2 16842130 16842912 -236413671 - L1ME1 LINE L1 -3857 2358 647 1758 309 9 33 chr2 16842913 16843492 -236413091 - L1ME1 LINE L1 -5797 599 35 1298 308 44 33 chr2 16843494 16844356 -236412227 - L1M3b LINE L1 -4286 2110 1266 2803 135 21 63 chr2 16844360 16844931 -236411652 - L1M3 LINE L1 -366 5802 5256 757 199 6 74 chr2 16844942 16845044 -236411539 - L1M3 LINE L1 -854 5292 5185 2084 135 93 9 chr2 16845044 16845378 -236411205 + THE1B LTR MaLR 3 364 0 12545 93 10 0 chr2 16845379 16846943 -236409640 + THE1B-int LTR MaLR 2 1580 0 2407 120 42 25 chr2 16846943 16847300 -236409283 + THE1B LTR MaLR 1 363 -1 757 199 6 74 chr2 16847300 16847421 -236409162 - L1M3 LINE L1 -959 5187 5086 * 3265 229 31 3 chr2 16847416 16848184 -236408399 + L1M3 LINE L1 4304 5093 -1053 1522 159 116 29 chr2 16848239 16848515 -236408068 - AluJb SINE Alu -8 304 5 1056 47 0 0 chr2 16848661 16848788 -236407795 + HERV17 LTR ERV1 8500 8626 0 2562 40 28 31 chr2 16848788 16849113 -236407470 + LTR17 LTR ERV1 1 324 -456 1030 112 13 0 chr2 16849187 16849339 -236407244 - MER11B LTR ERVK -23 1213 1060 29 28 0 0 chr2 16849351 16849387 -236407196 + AT_rich Low_complexity Low_complexity 1 36 0 636 226 47 94 chr2 16849979 16850213 -236406370 - MER39 LTR ERV1 -214 493 271 231 247 59 47 chr2 16850199 16850284 -236406299 - LTR48B LTR ERV1 -555 89 4 * 272 338 186 8 chr2 16850794 16851057 -236405526 + L3 LINE CR1 271 580 -997 1718 146 42 3 chr2 16851129 16851417 -236405166 + AluSx SINE Alu 3 301 -11 293 328 40 24 chr2 16851730 16851760 -236404823 - MIR SINE MIR -83 179 151 1204 249 120 15 chr2 16851760 16852153 -236404430 + MER57B LTR ERV1 1 434 0 293 328 40 24 chr2 16852153 16852247 -236404336 - MIR SINE MIR -111 151 53 594 252 35 0 chr2 16852910 16853053 -236403530 - MIR SINE MIR -108 154 7 784 190 41 56 chr2 16853109 16853304 -236403279 + MER72 LTR ERV1 3 194 -528 579 138 0 11 chr2 16853304 16853381 -236403202 + THE1C LTR MaLR 1 78 -297 2864 90 58 21 chr2 16853381 16853813 -236402770 + LTR7 LTR ERV1 1 448 -2 20337 93 14 20 chr2 16853822 16856819 -236399764 + HERVH LTR ERV1 8 2987 -4726 889 149 20 0 chr2 16856813 16856961 -236399622 + HERVH LTR ERV1 3140 3290 -4423 * 3451 104 6 0 chr2 16856960 16857451 -236399132 + HERVH LTR ERV1 3500 3993 -3720 4312 151 3 1 chr2 16857453 16858114 -236398469 + HERVH LTR ERV1 4488 5149 -2564 2617 94 43 33 chr2 16858115 16858709 -236397874 + HERVH LTR ERV1 5600 7713 0 2861 86 60 21 chr2 16858709 16859140 -236397443 + LTR7 LTR ERV1 1 448 -2 2237 113 3 0 chr2 16859142 16859444 -236397139 + THE1C LTR MaLR 73 375 0 489 188 42 0 chr2 16859444 16859539 -236397044 + MER72 LTR ERV1 190 288 -434 1597 179 186 13 chr2 16859561 16859786 -236396797 - MER31B LTR ERV1 0 466 281 2772 144 28 19 chr2 16859786 16860210 -236396373 + MSTA LTR MaLR 1 428 0 1597 179 186 13 chr2 16860210 16860381 -236396202 - MER31B LTR ERV1 -185 281 1 233 344 47 23 chr2 16860421 16860549 -236396034 + MIR3 SINE MIR 14 144 -64 2426 143 14 45 chr2 16860640 16861061 -236395522 - MER72 LTR ERV1 -4 718 311 366 159 0 0 chr2 16861076 16861139 -236395444 + MER31B LTR ERV1 404 466 0 283 252 81 36 chr2 16861613 16861724 -236394859 + MIR SINE MIR 117 232 -30 880 195 0 13 chr2 16861986 16862145 -236394438 + FRAM SINE Alu 1 157 -19 181 342 75 17 chr2 16862168 16862288 -236394295 + MIR SINE MIR 124 250 -12 254 269 10 67 chr2 16862660 16862764 -236393819 - MIR3 SINE MIR -15 193 96 338 277 223 22 chr2 16863017 16863378 -236393205 + L2 LINE L2 2787 3221 -51 21 36 0 0 chr2 16863558 16863586 -236392997 + AT_rich Low_complexity Low_complexity 1 28 0 370 333 0 25 chr2 16863705 16863867 -236392716 + CT-rich Low_complexity Low_complexity 4 161 0 1964 151 0 10 chr2 16864818 16865117 -236391466 + AluSx SINE Alu 1 296 -16 2055 143 0 3 chr2 16865120 16865427 -236391156 + AluSx SINE Alu 1 306 -6 183 207 85 110 chr2 16865438 16865520 -236391063 + L2 LINE L2 3038 3117 -155 253 280 0 90 chr2 16866168 16866268 -236390315 - MIR SINE MIR -144 118 28 182 346 20 10 chr2 16866275 16866376 -236390207 + MIR3 SINE MIR 3 104 -104 2564 143 2 10 chr2 16866376 16866769 -236389814 - MLT1B LTR MaLR 0 390 1 1126 221 119 14 chr2 16866771 16867074 -236389509 - MLT1D LTR MaLR -115 390 32 1311 280 79 30 chr2 16867704 16868233 -236388350 - MLT1H1 LTR MaLR 0 555 1 291 341 146 8 chr2 16868555 16868678 -236387905 - L2 LINE L2 0 3272 3133 276 262 115 16 chr2 16868959 16869081 -236387502 - L2 LINE L2 -3 3269 3136 691 245 77 63 chr2 16869118 16869404 -236387179 - L2 LINE L2 -2 3311 3022 289 258 30 15 chr2 16870214 16870280 -236386303 - MIR SINE MIR -159 103 37 2379 101 59 34 chr2 16870367 16870722 -236385861 - THE1B LTR MaLR 0 364 1 339 234 303 59 chr2 16870752 16871191 -236385392 - MLT1H1 LTR MaLR -3 552 1 1815 231 17 3 chr2 16871367 16871727 -236384856 - MLT1A1 LTR MaLR 0 365 1 193 263 35 0 chr2 16871775 16871832 -236384751 - L2 LINE L2 -220 3052 2994 476 323 129 5 chr2 16872789 16873006 -236383577 + MIR SINE MIR 16 259 -3 453 76 0 0 chr2 16873642 16873708 -236382875 + (CA)n Simple_repeat Simple_repeat 1 66 0 23 54 0 0 chr2 16874101 16874138 -236382445 + AT_rich Low_complexity Low_complexity 1 37 0 1620 148 61 25 chr2 16874340 16874617 -236381966 - AluJo SINE Alu -25 287 1 441 303 48 45 chr2 16874618 16874948 -236381635 - L1ME4a LINE L1 -222 5899 5569 545 249 22 61 chr2 16875247 16875428 -236381155 + MIR SINE MIR 13 186 -76 613 148 95 143 chr2 16876616 16876805 -236379778 - MER58C DNA MER1_type 0 215 36 421 257 20 0 chr2 16876829 16876930 -236379653 + MER5A DNA MER1_type 10 112 -77 256 348 67 0 chr2 16877317 16877452 -236379131 + MIR SINE MIR 104 247 -15 1031 239 95 35 chr2 16878124 16878584 -236377999 - L2 LINE L2 -252 3061 2573 274 184 40 40 chr2 16878618 16878694 -236377889 - Charlie7 DNA MER1_type -2490 122 47 226 201 52 178 chr2 16879177 16879351 -236377232 - MER5A DNA MER1_type -1 188 37 216 228 0 0 chr2 16879410 16879467 -236377116 + CT-rich Low_complexity Low_complexity 1 57 0 312 293 28 0 chr2 16879482 16879588 -236376995 - L2 LINE L2 -11 3261 3153 193 362 49 53 chr2 16879874 16880117 -236376466 + L2 LINE L2 3007 3248 -24 1842 244 20 24 chr2 16880529 16880984 -236375599 - MER82 DNA MER2_type 0 653 201 372 275 11 0 chr2 16881467 16881558 -236375025 - MER82 DNA MER2_type -560 93 2 908 186 88 5 chr2 16881606 16881821 -236374762 + MLT1H LTR MaLR 1 233 -316 272 243 9 103 chr2 16881979 16882086 -236374497 + MLT1H LTR MaLR 453 549 0 332 333 27 33 chr2 16882939 16883122 -236373461 + LTR37B LTR ERV1 17 198 -270 1854 236 65 35 chr2 16883681 16884201 -236372382 - MLT1E LTR MaLR -1 592 57 381 328 35 11 chr2 16884316 16884490 -236372093 + L1ME LINE L1 5524 5701 -420 260 282 0 0 chr2 16884608 16884679 -236371904 - L1MC/D LINE L1 -1925 5883 5813 213 154 0 0 chr2 16886376 16886415 -236370168 + (CA)n Simple_repeat Simple_repeat 2 40 0 2837 146 162 9 chr2 16886801 16887351 -236369232 + MER51A LTR ERV1 1 634 0 22 94 0 0 chr2 16888144 16888208 -236368375 + AT_rich Low_complexity Low_complexity 1 64 0 23 0 0 0 chr2 16888364 16888387 -236368196 + AT_rich Low_complexity Low_complexity 1 23 0 2824 151 44 4 chr2 16888836 16889333 -236367250 - L1MA4A LINE L1 -4 6299 5783 200 125 50 0 chr2 16889350 16889390 -236367193 + (CATATA)n Simple_repeat Simple_repeat 3 44 0 895 112 8 8 chr2 16889431 16889565 -236367018 - L1MA4A LINE L1 -514 5789 5656 299 257 47 41 chr2 16890152 16890323 -236366260 - L2 LINE L2 -629 2685 2514 2165 97 0 0 chr2 16890619 16890942 -236365641 - AluSg SINE Alu 0 323 1 301 274 52 26 chr2 16891037 16891190 -236365393 - MIR SINE MIR -97 165 9 431 298 65 28 chr2 16892108 16892323 -236364260 - MIR SINE MIR 0 262 40 401 282 99 65 chr2 16892560 16893071 -236363512 + L2 LINE L2 2691 3229 -84 25 0 0 0 chr2 16893284 16893309 -236363274 + AT_rich Low_complexity Low_complexity 1 25 0 441 328 16 11 chr2 16893337 16893523 -236363060 + MIR3 SINE MIR 8 194 -14 233 250 65 109 chr2 16895880 16896064 -236360519 + MIR3 SINE MIR 33 208 0 486 215 179 36 chr2 16896475 16896670 -236359913 - MLT1D LTR MaLR -267 238 16 3322 84 9 9 chr2 16896675 16897114 -236359469 + MLT2A1 LTR ERVL 6 444 0 44245 76 13 1 chr2 16897114 16902699 -236353884 + HERVL-A1-A1 LTR ERVL 1 5654 0 3387 78 16 0 chr2 16902701 16903136 -236353447 + MLT2A1 LTR ERVL 3 444 0 193 417 7 0 chr2 16903156 16903295 -236353288 - L2 LINE L2 -904 2410 2271 268 22 22 43 chr2 16903886 16903932 -236352651 + (TTTTTG)n Simple_repeat Simple_repeat 1 45 0 219 303 174 30 chr2 16904015 16904418 -236352165 - L2 LINE L2 -1887 1427 967 389 227 9 0 chr2 16904425 16904535 -236352048 + GA-rich Low_complexity Low_complexity 1 111 0 515 254 150 22 chr2 16904747 16905114 -236351469 - LTR16A1 LTR ERVL 0 457 1 230 350 17 33 chr2 16906162 16906282 -236350301 + MIR SINE MIR 60 177 -85 1146 197 34 88 chr2 16907324 16907633 -236348950 - MLT1B LTR MaLR 0 467 189 2103 131 0 19 chr2 16907633 16907947 -236348636 - AluSc SINE Alu -1 308 1 1146 197 34 88 chr2 16907947 16908127 -236348456 - MLT1B LTR MaLR -278 189 1 286 157 0 0 chr2 16909930 16909981 -236346602 - MLT1A2 LTR MaLR -268 106 56 1369 176 35 24 chr2 16909985 16910274 -236346309 + MLT1A1 LTR MaLR 59 350 -15 545 279 42 6 chr2 16910554 16910719 -236345864 + MER5B DNA MER1_type 8 178 0 363 281 41 8 chr2 16910888 16911009 -236345574 + MIR SINE MIR 25 149 -59 805 261 58 0 chr2 16911024 16911250 -236345333 + MIR SINE MIR 16 254 -8 2253 200 29 2 chr2 16911823 16912238 -236344345 + MSTB LTR MaLR 1 426 0 425 338 26 7 chr2 16913337 16913491 -236343092 + MIR SINE MIR 20 176 -86 * 637 308 49 59 chr2 16913489 16913914 -236342669 + L2 LINE L2 2892 3312 -1 972 201 50 65 chr2 16915908 16916187 -236340396 - ORSL DNA AcHobo 0 275 1 183 256 120 17 chr2 16916190 16916307 -236340276 + L2 LINE L2 3139 3267 -5 363 241 63 90 chr2 16916884 16917091 -236339492 - MIR3 SINE MIR -1 207 2 331 358 73 35 chr2 16918022 16918363 -236338220 + L1MEd LINE L1 6 359 -5760 536 266 110 86 chr2 16918582 16919153 -236337430 + L1MEd LINE L1 564 1148 -4971 363 44 0 0 chr2 16919468 16919513 -236337070 + (TG)n Simple_repeat Simple_repeat 2 46 0 206 196 11 76 chr2 16919530 16919596 -236336987 + GA-rich Low_complexity Low_complexity 3 63 -25 2116 139 0 0 chr2 16919596 16919897 -236336686 + AluSx SINE Alu 5 305 -7 206 196 11 76 chr2 16919897 16919922 -236336661 + GA-rich Low_complexity Low_complexity 63 88 0 685 272 72 60 chr2 16919948 16920349 -236336234 + L1ME3 LINE L1 5544 5949 -213 1971 135 76 22 chr2 16922786 16923142 -236333441 - THE1C LTR MaLR 0 375 1 245 366 36 0 chr2 16924151 16924263 -236332320 - L2 LINE L2 -36 3236 3121 207 321 25 12 chr2 16924293 16924374 -236332209 - MIR SINE MIR -94 114 33 258 176 0 0 chr2 16924534 16924585 -236331998 + GA-rich Low_complexity Low_complexity 2 52 0 253 329 47 22 chr2 16924989 16925132 -236331451 + MIR SINE MIR 9 154 -78 426 320 82 37 chr2 16925288 16925557 -236331026 - L2 LINE L2 -1 3271 2991 252 86 0 0 chr2 16926343 16926378 -236330205 + (CA)n Simple_repeat Simple_repeat 2 36 0 22 35 0 0 chr2 16927335 16927364 -236329219 + AT_rich Low_complexity Low_complexity 1 29 0 327 380 25 0 chr2 16928223 16928386 -236328197 + LTR16C LTR ERVL 71 237 -254 202 325 25 0 chr2 16928460 16928540 -236328043 - L2 LINE L2 -517 2797 2716 2385 102 0 0 chr2 16929004 16929309 -236327274 - AluSc SINE Alu -4 305 1 259 189 306 9 chr2 16929321 16929432 -236327151 + MIR SINE MIR 53 196 -66 1955 129 190 11 chr2 16930012 16930375 -236326208 + MSTA LTR MaLR 1 428 0 5468 143 30 1 chr2 16930437 16931324 -236325259 + L1PA16 LINE L1 5254 6166 0 321 307 35 18 chr2 16931573 16931702 -236324881 - MIR SINE MIR -62 146 37 23 0 0 0 chr2 16932216 16932239 -236324344 + AT_rich Low_complexity Low_complexity 1 23 0 216 0 0 0 chr2 16932558 16932582 -236324001 + (T)n Simple_repeat Simple_repeat 1 24 0 215 313 0 15 chr2 16933185 16933252 -236323331 + L2 LINE L2 2992 3057 -215 205 195 13 13 chr2 16934545 16934622 -236321961 + (CA)n Simple_repeat Simple_repeat 1 77 0 1130 212 91 74 chr2 16934816 16935236 -236321347 + LTR16A LTR ERVL 17 443 -7 285 281 11 0 chr2 16936583 16936672 -236319911 + (CA)n Simple_repeat Simple_repeat 1 90 0 638 182 8 62 chr2 16937196 16937359 -236319224 + L1MA7 LINE L1 6121 6295 -5 326 321 45 0 chr2 16938286 16938398 -236318185 - MIR SINE MIR -48 214 98 332 313 35 21 chr2 16938719 16938863 -236317720 - L3 LINE CR1 -1 1576 1431 * 836 296 12 28 chr2 16938850 16939103 -236317480 - MIR SINE MIR 0 262 14 528 255 122 32 chr2 16939394 16939582 -236317001 - MIR SINE MIR -13 249 45 1349 311 140 27 chr2 16939733 16940684 -236315899 + L2 LINE L2 1974 3026 -287 516 239 76 66 chr2 16940694 16941096 -236315487 - MLT1G1 LTR MaLR -2 528 107 2047 145 13 41 chr2 16941284 16941677 -236314906 + MLT1B LTR MaLR 1 382 -8 23 0 0 0 chr2 16941698 16941721 -236314862 + AT_rich Low_complexity Low_complexity 1 23 0 2051 151 0 0 chr2 16941933 16942245 -236314338 + AluSx SINE Alu 1 312 0 209 287 39 62 chr2 16942931 16943060 -236313523 - MIR SINE MIR -28 234 109 1780 212 30 30 chr2 16943531 16943961 -236312622 + MER74A LTR ERVL 2 431 -127 1190 203 232 11 chr2 16944440 16944789 -236311794 + MSTB LTR MaLR 1 426 0 292 304 0 0 chr2 16945046 16945125 -236311458 + MIR3 SINE MIR 105 183 -25 1511 283 42 39 chr2 16947201 16948259 -236308324 + L1M4 LINE L1 3920 4980 -1166 355 279 92 71 chr2 16949291 16949725 -236306858 - L1M4 LINE L1 -2660 3486 3044 230 319 120 69 chr2 16949802 16950096 -236306487 + L2 LINE L2 2418 2742 -572 1212 255 30 14 chr2 16950096 16950464 -236306119 + MLT1A2 LTR MaLR 1 374 0 230 319 120 69 chr2 16950464 16950601 -236305982 + L2 LINE L2 2742 2871 -443 207 351 0 13 chr2 16950736 16950813 -236305770 + L2 LINE L2 3237 3312 -1 2208 90 10 7 chr2 16951223 16951522 -236305061 + AluSg SINE Alu 1 300 -10 2255 147 3 13 chr2 16951868 16952243 -236304340 - L1PB3 LINE L1 -2 6152 5782 396 0 0 0 chr2 16952292 16952336 -236304247 + (TA)n Simple_repeat Simple_repeat 2 45 0 3003 119 10 10 chr2 16952336 16952839 -236303744 - L1PB3 LINE L1 -374 5780 5278 23 0 0 0 chr2 16952885 16952908 -236303675 + AT_rich Low_complexity Low_complexity 1 23 0 6612 164 14 27 chr2 16952988 16953995 -236302588 + L1PB3 LINE L1 3750 4768 -1386 2263 138 25 3 chr2 16953995 16954351 -236302232 - THE1B LTR MaLR 0 364 1 6612 164 14 27 chr2 16954351 16954727 -236301856 + L1PB3 LINE L1 4768 5147 -1007 2614 102 3 0 chr2 16954727 16955081 -236301502 - THE1A LTR MaLR 0 355 1 6612 164 14 27 chr2 16955081 16956138 -236300445 + L1PB3 LINE L1 5147 6154 0 22 0 0 0 chr2 16956154 16956176 -236300407 + AT_rich Low_complexity Low_complexity 1 22 0 364 289 123 22 chr2 16956186 16956463 -236300120 + L1M4 LINE L1 3208 3512 -2634 278 277 7 35 chr2 16957501 16957642 -236298941 - L1M4 LINE L1 -1480 4666 4530 311 317 64 70 chr2 16958093 16958339 -236298244 - L1M4 LINE L1 -2219 3927 3682 305 47 23 0 chr2 16958339 16958382 -236298201 + (TG)n Simple_repeat Simple_repeat 1 44 0 311 317 64 70 chr2 16958382 16958447 -236298136 - L1M4 LINE L1 -2464 3682 3618 22 0 0 0 chr2 16958692 16958714 -236297869 + AT_rich Low_complexity Low_complexity 1 22 0 279 51 0 0 chr2 16959135 16959174 -236297409 - L1ME3A LINE L1 -8 6162 6124 356 303 38 57 chr2 16959778 16959989 -236296594 - L1M4 LINE L1 -3612 2534 2328 22 56 0 0 chr2 16960504 16960540 -236296043 + AT_rich Low_complexity Low_complexity 1 36 0 520 364 52 30 chr2 16960646 16961014 -236295569 - HAL1 LINE L1 -757 1750 1375 1723 225 86 45 chr2 16961194 16961790 -236294793 + MLT1E2 LTR MaLR 1 620 -6 2331 92 0 0 chr2 16961959 16962253 -236294330 - AluY SINE Alu -17 294 1 228 318 91 31 chr2 16962320 16962450 -236294133 - MIR SINE MIR -68 140 34 252 288 12 0 chr2 16962884 16962964 -236293619 + MER20 DNA MER1_type 138 218 -1 201 308 13 51 chr2 16963176 16963254 -236293329 - L3 LINE CR1 -111 1466 1392 222 91 0 0 chr2 16963366 16963399 -236293184 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 862 106 7 7 chr2 16965292 16965434 -236291149 + (GAAA)n Simple_repeat Simple_repeat 4 145 0 985 177 0 0 chr2 16966134 16966292 -236290291 - AluJb SINE Alu -22 290 133 263 85 21 0 chr2 16966416 16966463 -236290120 + (TG)n Simple_repeat Simple_repeat 1 48 0 6232 37 0 3 chr2 16968790 16969540 -236287043 + L1PA4 LINE L1 5408 6155 0 192 303 13 0 chr2 16969647 16969723 -236286860 - L3 LINE CR1 -200 1377 1301 371 245 38 9 chr2 16970108 16970214 -236286369 - MIR SINE MIR -75 133 25 393 329 109 73 chr2 16971567 16971918 -236284665 + L1ME LINE L1 41 378 -5741 1930 144 13 17 chr2 16971918 16972217 -236284366 + AluSx SINE Alu 1 298 -14 393 329 109 73 chr2 16972217 16972562 -236284021 + L1ME LINE L1 378 762 -5357 489 317 55 39 chr2 16972617 16973044 -236283539 + L1ME LINE L1 3778 4223 -1906 875 287 5 0 chr2 16973044 16973267 -236283316 - MER58A DNA MER1_type 0 224 1 489 317 55 39 chr2 16973267 16973561 -236283022 + L1ME LINE L1 4223 4511 -1618 186 219 21 10 chr2 16973664 16973760 -236282823 + (TA)n Simple_repeat Simple_repeat 2 98 0 267 86 0 0 chr2 16973825 16973860 -236282723 + U2 snRNA snRNA 1 35 -153 633 313 79 11 chr2 16974004 16974372 -236282211 + L1ME LINE L1 4889 5281 -848 380 295 49 41 chr2 16974433 16974704 -236281879 + L1ME LINE L1 5327 5601 -552 280 138 138 0 chr2 16975073 16975138 -236281445 - MLT1J2 LTR MaLR -312 138 65 221 56 0 28 chr2 16975696 16975732 -236280851 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 299 329 53 48 chr2 16975851 16976058 -236280525 - MIR SINE MIR -43 219 12 641 221 27 17 chr2 16976312 16976484 -236280099 + MIR3 SINE MIR 23 197 -11 416 344 152 23 chr2 16977432 16977827 -236278756 - L2 LINE L2 -347 2967 2522 23 33 0 0 chr2 16977953 16977983 -236278600 + AT_rich Low_complexity Low_complexity 1 30 0 222 264 110 33 chr2 16978332 16978423 -236278160 + MIR SINE MIR 32 129 -79 2654 132 9 21 chr2 16978859 16979291 -236277292 + MSTA LTR MaLR 1 427 -1 231 204 0 0 chr2 16979362 16979406 -236277177 + L2 LINE L2 3265 3308 -5 * 268 341 15 44 chr2 16979404 16979539 -236277044 - MIR SINE MIR -86 176 46 331 347 7 67 chr2 16979990 16980140 -236276443 - L2 LINE L2 0 3272 3132 2925 198 30 24 chr2 16980155 16980431 -236276152 - MER82 DNA MER2_type -22 631 358 2151 107 0 7 chr2 16980431 16980721 -236275862 + AluSc SINE Alu 1 288 -21 2925 198 30 24 chr2 16980721 16981071 -236275512 - MER82 DNA MER2_type -295 358 1 285 378 21 34 chr2 16981137 16981370 -236275213 - L2 LINE L2 -179 3093 2864 183 42 0 0 chr2 16981868 16981892 -236274691 + (CA)n Simple_repeat Simple_repeat 1 24 0 284 331 183 0 chr2 16981937 16982079 -236274504 - MIR SINE MIR -76 186 19 411 21 0 0 chr2 16983586 16983634 -236272949 + (TG)n Simple_repeat Simple_repeat 2 49 0 2249 107 0 3 chr2 16983708 16984007 -236272576 + AluSg SINE Alu 4 301 -9 309 286 124 72 chr2 16985022 16985169 -236271414 - L1M2 LINE L1 -5825 1024 886 318 67 0 0 chr2 16985169 16985214 -236271369 + (CGGGG)n Simple_repeat Simple_repeat 5 49 0 309 286 124 72 chr2 16985214 16985412 -236271171 - L1M2 LINE L1 -5963 886 661 425 279 57 0 chr2 16986980 16987102 -236269481 - MIR SINE MIR -50 212 84 264 240 62 0 chr2 16987755 16987832 -236268751 + MIR SINE MIR 86 152 -56 241 356 67 48 chr2 16988075 16988283 -236268300 - L2 LINE L2 0 3272 3061 403 347 110 23 chr2 16988539 16988758 -236267825 + MIR SINE MIR 1 238 -24 453 292 90 2 chr2 16989144 16989320 -236267263 - MIR SINE MIR -49 213 28 1658 148 30 0 chr2 16989787 16990057 -236266526 - AluJb SINE Alu -8 304 27 330 222 171 34 chr2 16990443 16990560 -236266023 - L2 LINE L2 -2 3270 3138 295 267 44 22 chr2 16990822 16990912 -236265671 + MIR3 SINE MIR 111 202 -6 435 304 65 27 chr2 16991633 16991834 -236264749 - MIR SINE MIR -49 213 6 348 167 20 39 chr2 16992328 16992430 -236264153 + A-rich Low_complexity Low_complexity 1 100 0 295 252 179 53 chr2 16992534 16992685 -236263898 + MIR SINE MIR 32 201 -61 346 193 136 11 chr2 16993121 16993209 -236263374 + MER46C DNA MER2_type 7 105 -233 518 218 57 0 chr2 16993273 16993397 -236263186 + MER46C DNA MER2_type 207 337 -1 208 173 0 19 chr2 16993573 16993625 -236262958 + A-rich Low_complexity Low_complexity 2 52 0 283 245 6 6 chr2 16994760 16994919 -236261664 + (TG)n Simple_repeat Simple_repeat 2 160 0 446 282 58 6 chr2 16995618 16995774 -236260809 + MIR3 SINE MIR 16 179 -29 200 327 75 75 chr2 16996295 16996521 -236260062 - MIR SINE MIR -5 257 32 23 33 0 0 chr2 16996569 16996599 -236259984 + AT_rich Low_complexity Low_complexity 1 30 0 1474 230 59 61 chr2 16997375 16997870 -236258713 - L2 LINE L2 0 3313 2820 255 329 42 36 chr2 16997883 16998050 -236258533 + L2 LINE L2 3081 3248 -24 181 244 289 0 chr2 16999099 16999189 -236257394 - L2 LINE L2 -6 3307 3192 404 278 73 69 chr2 17000900 17001188 -236255395 - MLT1I LTR MaLR -23 386 98 349 296 0 18 chr2 17001321 17001490 -236255093 + (TACTG)n Simple_repeat Simple_repeat 3 168 0 1051 209 88 4 chr2 17001809 17002082 -236254501 + MER2 DNA MER2_type 49 344 -1 242 318 31 62 chr2 17002239 17002368 -236254215 + L2 LINE L2 3189 3313 0 722 207 7 8 chr2 17002933 17003086 -236253497 + MIR SINE MIR 63 213 -49 345 313 62 33 chr2 17003238 17003511 -236253072 - L2 LINE L2 -249 3064 2795 494 35 0 0 chr2 17003892 17003949 -236252634 + ERVL LTR ERVL 2501 2557 -3207 2017 196 58 58 chr2 17003949 17004469 -236252114 - MLT2B1 LTR ERVL 0 520 1 226 288 0 30 chr2 17004915 17004981 -236251602 - MIR3 SINE MIR -41 167 104 313 361 52 13 chr2 17005582 17005737 -236250846 - MIR SINE MIR -12 250 90 301 383 52 7 chr2 17006848 17007002 -236249581 - MIR SINE MIR -12 250 90 251 235 118 15 chr2 17007120 17007188 -236249395 - L2 LINE L2 -5 3267 3193 349 216 0 54 chr2 17007834 17007908 -236248675 - L2 LINE L2 0 3313 3244 242 247 33 20 chr2 17007942 17008092 -236248491 + (TAA)n Simple_repeat Simple_repeat 2 153 0 2459 276 138 12 chr2 17008130 17009253 -236247330 - L2 LINE L2 -160 3153 1901 23 33 0 0 chr2 17011093 17011123 -236245460 + AT_rich Low_complexity Low_complexity 1 30 0 247 244 79 71 chr2 17012132 17012259 -236244324 - MIR SINE MIR -65 197 70 367 272 69 9 chr2 17013162 17013297 -236243286 + MIR3 SINE MIR 15 170 -38 1608 201 19 35 chr2 17013466 17013835 -236242748 - MLT1A1 LTR MaLR 0 365 3 1096 170 0 5 chr2 17014084 17014272 -236242311 - AluJb SINE Alu -6 306 120 229 391 22 17 chr2 17014471 17014650 -236241933 + MIR3 SINE MIR 13 192 -16 228 343 15 0 chr2 17015572 17015639 -236240944 - L2 LINE L2 -1 3271 3204 763 186 96 51 chr2 17015795 17015972 -236240611 - MER20 DNA MER1_type 0 219 35 385 253 110 3 chr2 17015991 17016118 -236240465 - MIR SINE MIR -68 140 24 874 228 10 35 chr2 17016134 17016336 -236240247 + MER63A DNA MER1_type 1 197 -13 191 311 19 19 chr2 17016683 17016786 -236239797 - L2 LINE L2 -964 2350 2248 272 265 48 0 chr2 17016809 17016892 -236239691 + MIR SINE MIR 105 191 -71 346 344 101 16 chr2 17017210 17017399 -236239184 - L2 LINE L2 -516 2798 2594 1066 148 188 64 chr2 17017404 17017677 -236238906 + AluSg SINE Alu 2 305 0 295 283 9 38 chr2 17018598 17018704 -236237879 - MIR SINE MIR -72 136 33 201 196 18 54 chr2 17018923 17018979 -236237604 - MIR3 SINE MIR -144 64 11 219 298 183 29 chr2 17019385 17019489 -236237094 - MIR SINE MIR -30 232 113 244 250 29 128 chr2 17019898 17020070 -236236513 - MIR SINE MIR -61 201 47 440 314 54 54 chr2 17020763 17021021 -236235562 + MIR SINE MIR 4 261 -1 613 250 0 0 chr2 17022379 17022511 -236234072 - MER94 DNA DNA -2 132 1 307 314 151 5 chr2 17022729 17022914 -236233669 + MIR SINE MIR 51 262 0 940 277 22 0 chr2 17023440 17023671 -236232912 + MIR SINE MIR 27 262 0 278 309 118 18 chr2 17024007 17024117 -236232466 + MIR SINE MIR 31 151 -57 186 43 0 0 chr2 17026455 17026478 -236230105 + (GA)n Simple_repeat Simple_repeat 2 24 0 454 274 71 36 chr2 17026811 17026979 -236229604 + MIR3 SINE MIR 35 208 0 402 325 30 54 chr2 17028306 17028509 -236228074 + MIR SINE MIR 5 202 -60 725 297 103 62 chr2 17029053 17029521 -236227062 - L2 LINE L2 0 3313 2827 360 289 82 86 chr2 17029903 17030218 -236226365 - L2 LINE L2 -2 3270 2957 440 302 68 64 chr2 17030917 17031212 -236225371 - L2 LINE L2 -3 3269 2974 246 157 0 20 chr2 17031673 17031724 -236224859 - LTR66 LTR ERVL -171 439 390 317 225 11 0 chr2 17031730 17031819 -236224764 + (TATG)n Simple_repeat Simple_repeat 3 92 0 278 291 136 0 chr2 17032003 17032113 -236224470 - MIR3 SINE MIR -70 138 14 232 364 0 0 chr2 17032300 17032366 -236224217 - L3 LINE CR1 -113 1464 1399 257 248 248 8 chr2 17033127 17033252 -236223331 + MIR3 SINE MIR 33 187 -21 640 306 6 0 chr2 17034165 17034348 -236222235 + MIR SINE MIR 79 262 0 210 239 55 92 chr2 17035400 17035509 -236221074 - MIR3 SINE MIR 0 208 104 192 333 0 0 chr2 17035567 17035624 -236220959 + MIR SINE MIR 189 245 -17 404 203 326 14 chr2 17035828 17035966 -236220617 - MER5A DNA MER1_type 0 189 9 248 304 59 39 chr2 17037538 17037640 -236218943 + MIR SINE MIR 157 260 -2 2491 126 3 3 chr2 17037931 17038295 -236218288 - THE1B LTR MaLR 0 364 1 222 198 49 0 chr2 17038671 17038752 -236217831 + CT-rich Low_complexity Low_complexity 4 88 0 2176 102 0 23 chr2 17039702 17040006 -236216577 - AluSc SINE Alu -12 297 1 202 286 157 14 chr2 17040026 17040096 -236216487 - L2 LINE L2 -38 3234 3155 360 0 0 0 chr2 17040146 17040186 -236216397 + (TA)n Simple_repeat Simple_repeat 2 41 0 381 317 68 16 chr2 17040741 17040990 -236215593 + MIR SINE MIR 1 262 0 401 361 93 19 chr2 17041032 17041353 -236215230 + L3 LINE CR1 916 1260 -317 294 308 0 0 chr2 17041344 17041422 -236215161 - L2 LINE L2 -2 3311 3234 * 273 268 144 0 chr2 17041559 17041656 -236214927 - L2 LINE L2 -340 2973 2863 194 352 0 28 chr2 17041630 17041701 -236214882 - MIR SINE MIR -80 128 60 * 349 333 36 18 chr2 17042349 17042517 -236214066 - MIR SINE MIR -13 249 79 2039 125 3 26 chr2 17043187 17043490 -236213093 + AluSx SINE Alu 1 296 -16 192 365 35 35 chr2 17045398 17045513 -236211070 - MIR SINE MIR -59 149 35 253 329 0 0 chr2 17046063 17046136 -236210447 - Charlie8 DNA MER1_type -2182 235 163 1547 197 14 40 chr2 17046443 17046813 -236209770 - MLT1A1 LTR MaLR 0 365 6 12523 149 30 32 chr2 17047184 17049227 -236207356 + Tigger1 DNA MER2_type 1 2048 -370 1513 197 43 0 chr2 17049227 17049526 -236207057 + AluJb SINE Alu 1 312 0 12523 149 30 32 chr2 17049526 17049735 -236206848 + Tigger1 DNA MER2_type 2048 2249 -169 2162 116 7 0 chr2 17049735 17050027 -236206556 + AluSx SINE Alu 1 294 -18 12523 149 30 32 chr2 17050027 17050197 -236206386 + Tigger1 DNA MER2_type 2249 2418 0 1518 205 22 11 chr2 17050343 17050709 -236205874 - L1MA10 LINE L1 -349 5819 5450 2195 156 70 15 chr2 17050709 17051161 -236205422 + L1MA10 LINE L1 5852 6331 -3 293 262 161 36 chr2 17052480 17052648 -236203935 - MIR SINE MIR -54 208 20 238 259 222 19 chr2 17052682 17052790 -236203793 + MIR3 SINE MIR 73 202 -6 1499 223 122 5 chr2 17052832 17053235 -236203348 - LTR40a LTR ERVL 0 519 70 238 334 158 42 chr2 17053373 17053971 -236202612 - L2 LINE L2 -23 3249 2581 26 0 0 0 chr2 17053971 17053997 -236202586 + AT_rich Low_complexity Low_complexity 1 26 0 644 264 50 88 chr2 17054139 17054400 -236202183 + MIR SINE MIR 12 262 0 26 0 0 0 chr2 17054540 17054566 -236202017 + AT_rich Low_complexity Low_complexity 1 26 0 4806 134 10 11 chr2 17054566 17055369 -236201214 - L1PA15 LINE L1 -3 6162 5361 180 268 54 0 chr2 17055757 17055813 -236200770 + MIR SINE MIR 74 132 -130 255 177 42 42 chr2 17056987 17057083 -236199500 - L1M4 LINE L1 -410 5774 5679 3049 217 29 34 chr2 17057309 17058437 -236198146 - L1M4 LINE L1 -469 5705 4579 1880 141 40 45 chr2 17058437 17058814 -236197769 - THE1C LTR MaLR 0 375 1 3049 217 29 34 chr2 17058814 17059035 -236197548 - L1M4 LINE L1 -1595 4579 4358 * 6191 205 17 22 chr2 17059033 17059085 -236197498 - L1MC1 LINE L1 -1 6332 6281 2361 21 11 4 chr2 17059085 17059365 -236197218 + AluY SINE Alu 17 298 -13 6191 205 17 22 chr2 17059365 17060321 -236196262 - L1MC1 LINE L1 -52 6281 5321 470 160 59 0 chr2 17060321 17060440 -236196143 - L1MA5 LINE L1 -4 6296 6171 6191 205 17 22 chr2 17060440 17062332 -236194251 - L1MC1 LINE L1 -1012 5321 3443 3861 209 30 13 chr2 17062335 17062657 -236193926 - L1M4 LINE L1 -377 6299 5984 4024 142 14 1 chr2 17062657 17063325 -236193258 - L1PA15 LINE L1 -6 6159 5484 1575 36 20 0 chr2 17063331 17063527 -236193056 - L1PA4 LINE L1 0 6155 5956 3861 209 30 13 chr2 17063527 17064499 -236192084 - L1M4 LINE L1 -696 5980 4974 891 231 4 19 chr2 17064503 17064759 -236191824 + L1P LINE L1 4202 4453 -1693 9794 164 22 9 chr2 17064772 17066605 -236189978 - Tigger1 DNA MER2_type -562 1856 1 4501 258 78 52 chr2 17066610 17069767 -236186816 - L1M4c LINE L1 -3291 3353 1 21 0 0 0 chr2 17070443 17070464 -236186119 + AT_rich Low_complexity Low_complexity 1 21 0 197 216 0 0 chr2 17071043 17071080 -236185503 + L3 LINE CR1 1535 1571 -6 2198 130 7 0 chr2 17071196 17071495 -236185088 - AluSx SINE Alu -11 301 1 8675 134 33 14 chr2 17071496 17072978 -236183605 - THE1C-int LTR MaLR -70 1510 1 1030 122 70 52 chr2 17072984 17073213 -236183370 - THE1C LTR MaLR -5 370 138 294 219 0 0 chr2 17073214 17073278 -236183305 - L1PB4 LINE L1 -55 6101 6038 242 359 132 0 chr2 17073280 17073447 -236183136 + L2 LINE L2 2860 3048 -265 1133 312 147 35 chr2 17073766 17074249 -236182334 + L2 LINE L2 1797 2225 -1088 2171 145 3 0 chr2 17074249 17074553 -236182030 - AluSx SINE Alu -7 305 1 1133 312 147 35 chr2 17074553 17075421 -236181162 + L2 LINE L2 2225 3313 0 361 282 145 0 chr2 17075881 17075998 -236180585 - L2 LINE L2 0 3313 3180 1109 306 63 27 chr2 17076037 17076482 -236180101 - L2 LINE L2 0 3313 2853 425 326 94 56 chr2 17076498 17076838 -236179745 + L2 LINE L2 2820 3172 -100 180 183 14 28 chr2 17076872 17076943 -236179640 + GA-rich Low_complexity Low_complexity 2 71 0 350 153 0 47 chr2 17077479 17077564 -236179019 - L1PA11 LINE L1 0 6174 6094 2203 95 3 0 chr2 17078741 17079037 -236177546 - AluY SINE Alu -14 297 1 374 297 81 39 chr2 17079735 17080633 -236175950 + L1MC4a LINE L1 4109 5048 -1098 1823 250 118 42 chr2 17080809 17081193 -236175390 + L1MC4a LINE L1 5254 5608 -2200 2304 109 0 0 chr2 17081193 17081504 -236175079 + AluSq SINE Alu 1 311 -2 1823 250 118 42 chr2 17081504 17082060 -236174523 + L1MC4a LINE L1 5608 6265 -1543 414 335 28 6 chr2 17082418 17082594 -236173989 + MIR SINE MIR 14 193 -69 248 348 26 0 chr2 17082648 17082763 -236173820 + L2 LINE L2 3196 3313 0 270 454 27 6 chr2 17083907 17084090 -236172493 + MIR3 SINE MIR 5 191 -17 448 234 28 48 chr2 17084133 17084278 -236172305 - MIR3 SINE MIR -48 160 19 22 70 0 0 chr2 17084413 17084456 -236172127 + AT_rich Low_complexity Low_complexity 1 43 0 349 274 34 26 chr2 17084562 17084679 -236171904 + MIR SINE MIR 109 226 -36 198 211 0 19 chr2 17084694 17084746 -236171837 - MIR SINE MIR -107 155 105 377 364 29 12 chr2 17084828 17085001 -236171582 + MIR SINE MIR 13 188 -74 2159 133 96 20 chr2 17085661 17086059 -236170524 - MSTA LTR MaLR 0 428 1 285 332 216 29 chr2 17086453 17086763 -236169820 + L3 LINE CR1 438 805 -772 610 256 6 0 chr2 17086963 17087135 -236169448 + MER119 DNA MER1_type 106 278 -305 249 333 220 0 chr2 17087519 17087669 -236168914 + L2 LINE L2 2913 3095 -218 1781 161 39 0 chr2 17087715 17088045 -236168538 - L1MC2 LINE L1 -5 6339 5997 2402 164 30 7 chr2 17088047 17088509 -236168074 - L1MC2 LINE L1 -408 5936 5464 203 205 0 0 chr2 17089545 17089584 -236166999 + MIR SINE MIR 66 104 -104 268 353 23 23 chr2 17090687 17090820 -236165763 - MIR3 SINE MIR -11 197 65 222 37 0 0 chr2 17091065 17091092 -236165491 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 293 350 29 21 chr2 17091966 17092106 -236164477 - MIR SINE MIR -108 154 14 1466 196 16 57 chr2 17092656 17093044 -236163539 + MLT1A2 LTR MaLR 1 372 -2 1678 180 9 25 chr2 17093901 17094218 -236162365 - AluJo SINE Alu 0 312 1 562 225 107 24 chr2 17095323 17095612 -236160971 + HsTC2 DNA Tc2 1579 1891 -7 278 332 97 10 chr2 17095749 17096038 -236160545 + L1 LINE L1 3625 3938 -2208 373 315 150 31 chr2 17096397 17096657 -236159926 - L2 LINE L2 0 3313 3023 230 271 58 37 chr2 17096729 17096917 -236159666 + L1 LINE L1 4371 4562 -1584 1846 174 14 20 chr2 17096934 17097278 -236159305 + MER61A LTR ERV1 2 343 0 270 343 27 20 chr2 17097361 17097507 -236159076 - L2 LINE L2 -924 2390 2244 331 178 0 55 chr2 17098238 17098311 -236158272 + MER76 LTR ERV 1 69 -619 323 182 13 0 chr2 17099586 17099663 -236156920 + GA-rich Low_complexity Low_complexity 3 80 0 192 400 0 0 chr2 17100152 17100217 -236156366 - MIR SINE MIR -106 102 38 32 0 0 0 chr2 17100390 17100422 -236156161 + AT_rich Low_complexity Low_complexity 1 32 0 26 0 0 0 chr2 17100676 17100702 -236155881 + AT_rich Low_complexity Low_complexity 1 26 0 1011 276 19 91 chr2 17101223 17101684 -236154899 + L1ME LINE L1 132 559 -5837 297 280 86 33 chr2 17101852 17102281 -236154302 + L1ME LINE L1 3597 4048 -2167 1081 171 21 28 chr2 17102304 17102716 -236153867 - MLT1D LTR MaLR 0 505 6 216 0 0 0 chr2 17102752 17102776 -236153807 + (TC)n Simple_repeat Simple_repeat 2 25 0 218 103 0 26 chr2 17102776 17102815 -236153768 + (TA)n Simple_repeat Simple_repeat 2 39 0 439 309 101 42 chr2 17102863 17103338 -236153245 + L1ME LINE L1 4168 4670 -1545 1942 152 3 0 chr2 17103626 17103922 -236152661 + AluSx SINE Alu 1 297 -15 27 0 0 0 chr2 17104183 17104210 -236152373 + AT_rich Low_complexity Low_complexity 1 27 0 288 257 30 10 chr2 17104370 17104471 -236152112 + L1MC5 LINE L1 7808 7910 -51 2375 90 3 0 chr2 17105129 17105429 -236151154 - AluSc SINE Alu -8 301 1 329 252 40 80 chr2 17105694 17105786 -236150797 + L1ME LINE L1 5333 5418 -2459 7497 31 2 0 chr2 17105786 17106874 -236149709 + L1PA3 LINE L1 5066 6155 0 329 252 40 80 chr2 17106874 17106932 -236149651 + L1ME LINE L1 5418 5477 -2400 234 269 23 8 chr2 17107151 17107281 -236149302 + L1ME LINE L1 5763 5894 -296 344 240 210 0 chr2 17107657 17107757 -236148826 - L2 LINE L2 -8 3305 3185 21 36 0 0 chr2 17108259 17108287 -236148296 + AT_rich Low_complexity Low_complexity 1 28 0 459 282 84 15 chr2 17109265 17109538 -236147045 - L1ME3A LINE L1 -104 6066 5775 1623 189 93 31 chr2 17109538 17110066 -236146517 - MLT2A2 LTR ERVL 0 554 1 9164 124 42 47 chr2 17110067 17111656 -236144927 + THE1B-int LTR MaLR 1 1580 0 2582 102 14 11 chr2 17111656 17112019 -236144564 + THE1B LTR MaLR 1 364 0 845 262 58 9 chr2 17112019 17112480 -236144103 - L1ME3A LINE L1 -391 5779 5266 1704 221 20 6 chr2 17112612 17112969 -236143614 + MLT1A2 LTR MaLR 2 363 -11 2421 225 19 21 chr2 17112980 17113606 -236142977 + MLT1A2-int LTR MaLR 1 625 -1110 1881 226 11 20 chr2 17114032 17114470 -236142113 + MLT1A2-int LTR MaLR 1302 1735 0 1321 191 55 76 chr2 17114470 17114852 -236141731 + MLT1A2 LTR MaLR 1 374 0 287 238 228 0 chr2 17114973 17115074 -236141509 - MER5C DNA MER1_type -200 124 1 1029 184 35 4 chr2 17115128 17115384 -236141199 - Charlie5 DNA MER1_type -87 2525 2262 280 158 26 66 chr2 17115392 17115468 -236141115 - Charlie5 DNA MER1_type -2513 99 27 719 138 0 21 chr2 17115469 17115614 -236140969 + L1P LINE L1 4600 4741 -1405 222 345 34 14 chr2 17116114 17116262 -236140321 + MIR SINE MIR 99 249 -13 2082 146 3 0 chr2 17117490 17117799 -236138784 - AluSg SINE Alu 0 310 1 2570 119 3 11 chr2 17118121 17118498 -236138085 + THE1C LTR MaLR 2 375 0 9454 136 24 31 chr2 17118498 17120090 -236136493 + THE1C-int LTR MaLR 1 1580 0 2156 93 10 13 chr2 17120090 17120401 -236136182 + THE1C LTR MaLR 1 310 -65 1158 171 4 80 chr2 17120394 17120669 -236135914 - MER7A DNA MER2_type -94 252 1 * 236 294 28 28 chr2 17120669 17120778 -236135805 - MIR SINE MIR -2 260 152 348 301 187 0 chr2 17120786 17120909 -236135674 - MER5A DNA MER1_type -8 181 36 430 317 0 28 chr2 17120926 17121068 -236135515 - MIR SINE MIR -90 172 35 511 343 42 13 chr2 17121722 17121961 -236134622 - MIR SINE MIR -5 257 12 2249 100 10 3 chr2 17122803 17123103 -236133480 - AluSq SINE Alu -11 302 1 21 0 0 0 chr2 17123395 17123416 -236133167 + AT_rich Low_complexity Low_complexity 1 21 0 234 378 36 69 chr2 17124373 17124942 -236131641 + L2 LINE L2 2660 3271 -1 215 186 23 0 chr2 17126027 17126070 -236130513 + A-rich Low_complexity Low_complexity 3 46 0 24 67 0 0 chr2 17126190 17126235 -236130348 + AT_rich Low_complexity Low_complexity 1 45 0 1915 149 48 107 chr2 17126406 17126902 -236129681 + MLT1C LTR MaLR 1 467 0 5682 149 21 12 chr2 17126902 17127929 -236128654 - Tigger1 DNA MER2_type -2 2416 1380 1084 128 55 66 chr2 17127919 17127961 -236128622 - Tigger1 DNA MER2_type -2164 254 213 * 1567 189 50 4 chr2 17127961 17128265 -236128318 + AluJb SINE Alu 1 317 0 1084 128 55 66 chr2 17128265 17128477 -236128106 - Tigger1 DNA MER2_type -2205 213 1 641 239 19 19 chr2 17128888 17128951 -236127632 - MER20 DNA MER1_type 0 219 157 549 0 0 0 chr2 17128951 17129012 -236127571 + (CA)n Simple_repeat Simple_repeat 1 61 0 641 239 19 19 chr2 17129012 17129107 -236127476 - MER20 DNA MER1_type -61 158 61 1438 184 125 33 chr2 17129396 17129917 -236126666 - MLT2A2 LTR ERVL 0 554 1 346 272 144 17 chr2 17131692 17131865 -236124718 - MIR SINE MIR -60 202 8 202 351 11 21 chr2 17132013 17132107 -236124476 - MIR SINE MIR -156 106 14 1374 179 120 99 chr2 17132171 17132566 -236124017 + MLT2B1 LTR ERVL 1 409 -111 2264 100 7 0 chr2 17132566 17132857 -236123726 + AluSp SINE Alu 1 293 -20 1374 179 120 99 chr2 17132857 17132936 -236123647 + MLT2B1 LTR ERVL 409 485 -35 2519 137 11 48 chr2 17133046 17133485 -236123098 + MSTB LTR MaLR 4 426 0 288 0 0 0 chr2 17133506 17133538 -236123045 + (CA)n Simple_repeat Simple_repeat 1 32 0 3471 248 58 72 chr2 17134185 17136662 -236119921 - L1ME1 LINE L1 -3 6163 3730 1449 59 5 0 chr2 17136662 17136849 -236119734 - L1PA5 LINE L1 0 6154 5967 3471 248 58 72 chr2 17136849 17137365 -236119218 - L1ME1 LINE L1 -2436 3730 3208 1563 127 17 4 chr2 17137381 17137617 -236118966 - AluSx SINE Alu -12 300 62 300 213 43 0 chr2 17137617 17137701 -236118882 - L1M4 LINE L1 -1416 4730 4640 533 114 0 0 chr2 17137704 17137783 -236118800 - AluSx SINE Alu -233 79 1 728 319 16 40 chr2 17137973 17138224 -236118359 + MIR SINE MIR 16 260 -2 213 94 0 0 chr2 17138435 17138467 -236118116 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1973 129 7 0 chr2 17138471 17138750 -236117833 - AluSx SINE Alu -31 281 1 2351 268 107 24 chr2 17140538 17140858 -236115725 - L2 LINE L2 -26 3287 2995 1687 184 33 6 chr2 17140858 17141195 -236115388 + L1PA16 LINE L1 5821 6166 0 2351 268 107 24 chr2 17141195 17141935 -236114648 - L2 LINE L2 -318 2995 2151 435 181 101 14 chr2 17141997 17142135 -236114448 - MER5C DNA MER1_type -48 276 127 1219 106 35 26 chr2 17142667 17142894 -236113689 - L1MA9 LINE L1 0 6312 6084 476 227 8 34 chr2 17143130 17143249 -236113334 - MER5C DNA MER1_type -196 128 13 443 270 203 22 chr2 17143348 17143570 -236113013 - L2 LINE L2 -1162 2152 1891 195 42 0 0 chr2 17144023 17144047 -236112536 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2247 115 0 3 chr2 17144054 17144410 -236112173 - AluSx SINE Alu 0 355 1 207 319 125 0 chr2 17146504 17146576 -236110007 - L2 LINE L2 -5 3267 3187 511 309 126 50 chr2 17147334 17147939 -236108644 - L2 LINE L2 -440 2874 2224 25 0 0 0 chr2 17149099 17149124 -236107459 + AT_rich Low_complexity Low_complexity 1 25 0 807 135 11 34 chr2 17149731 17149909 -236106674 - L1MA8 LINE L1 0 6291 6118 1756 223 6 11 chr2 17150887 17151250 -236105333 - MLT1A1 LTR MaLR -2 363 3 363 296 72 0 chr2 17151577 17151702 -236104881 + L2 LINE L2 3180 3313 0 646 324 28 47 chr2 17152222 17152475 -236104108 - MIR SINE MIR 0 262 15 427 254 192 6 chr2 17153394 17153571 -236103012 - L1MC5 LINE L1 -728 7233 7024 285 265 60 0 chr2 17154381 17154464 -236102119 + MIR SINE MIR 123 210 -52 317 175 32 0 chr2 17155185 17155248 -236101335 - MER94 DNA DNA -45 89 25 396 167 0 0 chr2 17155892 17155964 -236100619 + (CA)n Simple_repeat Simple_repeat 1 72 0 676 295 5 36 chr2 17156249 17156442 -236100141 + MER20 DNA MER1_type 28 214 -5 333 329 68 81 chr2 17156847 17157416 -236099167 + L1MC4a LINE L1 6119 6680 -1128 399 286 48 5 chr2 17157648 17157837 -236098746 + L1M4 LINE L1 2320 2516 -3630 2072 253 52 11 chr2 17157987 17158703 -236097880 - L1M4 LINE L1 -1857 4289 3545 341 274 0 0 chr2 17158741 17158836 -236097747 - L1M4 LINE L1 -2740 3406 3312 207 0 0 0 chr2 17159180 17159203 -236097380 + (TAA)n Simple_repeat Simple_repeat 2 24 0 21 0 0 0 chr2 17159839 17159860 -236096723 + AT_rich Low_complexity Low_complexity 1 21 0 245 220 34 0 chr2 17159879 17159938 -236096645 - L1ME LINE L1 -280 5841 5781 1645 96 42 27 chr2 17162045 17162306 -236094277 + AluY SINE Alu 36 300 -11 473 369 5 0 chr2 17162401 17162588 -236093995 + MIR SINE MIR 65 252 -10 826 145 24 92 chr2 17162946 17163153 -236093430 - 7SK RNA RNA 0 193 1 3471 123 63 22 chr2 17163257 17163844 -236092739 - LTR36 LTR ERV1 0 611 1 421 343 45 0 chr2 17164600 17164778 -236091805 + MIR SINE MIR 23 208 -54 318 243 0 0 chr2 17164820 17164890 -236091693 + MIR SINE MIR 81 150 -112 284 333 36 30 chr2 17165386 17165551 -236091032 + L2 LINE L2 2208 2373 -941 381 282 19 45 chr2 17165874 17166052 -236090531 + MIR SINE MIR 42 208 -54 569 326 84 45 chr2 17166120 17166679 -236089904 + L2 LINE L2 1465 2045 -1269 256 185 46 0 chr2 17167335 17167400 -236089183 - L1ME1 LINE L1 -7 6954 6887 1466 230 21 12 chr2 17167452 17167787 -236088796 - L1ME1 LINE L1 -79 6882 6545 1148 248 25 89 chr2 17167806 17168323 -236088260 + MLT1D LTR MaLR 22 505 0 1118 241 136 50 chr2 17168323 17168780 -236087803 - L1ME1 LINE L1 -410 6551 6056 1417 220 46 76 chr2 17168782 17169359 -236087224 - MLT1E3 LTR MaLR -2 622 1 1358 228 21 75 chr2 17169359 17169828 -236086755 - L1ME1 LINE L1 -881 6060 5617 300 252 84 7 chr2 17169823 17169966 -236086617 + L1M4 LINE L1 2836 2989 -3157 * 1745 32 0 0 chr2 17170035 17170251 -236086332 - L1PA4 LINE L1 -914 5232 5017 7018 34 19 35 chr2 17170251 17171196 -236085387 + L1PA4 LINE L1 5223 6152 -3 2929 272 76 26 chr2 17171243 17172655 -236083928 + L1M4 LINE L1 3073 4554 -1592 300 250 42 0 chr2 17172652 17172748 -236083835 - L1ME1 LINE L1 -3663 3278 3179 * 1317 276 64 29 chr2 17172852 17173481 -236083102 + MER49 LTR ERV1 94 923 0 1097 282 65 45 chr2 17173482 17173664 -236082919 - L1ME1 LINE L1 -4136 2986 2809 2526 71 0 3 chr2 17173664 17173973 -236082610 - AluY SINE Alu -3 308 1 1097 282 65 45 chr2 17173973 17174549 -236082034 - L1ME1 LINE L1 -4313 2809 2213 381 186 24 0 chr2 17174551 17174675 -236081908 + (TA)n Simple_repeat Simple_repeat 2 128 0 1213 241 47 39 chr2 17174709 17175474 -236081109 - L1ME1 LINE L1 -4891 1532 1218 388 297 113 21 chr2 17175561 17175888 -236080695 - L1ME1 LINE L1 -6056 367 11 27 49 0 0 chr2 17176961 17177002 -236079581 + AT_rich Low_complexity Low_complexity 1 41 0 236 169 15 46 chr2 17177516 17177581 -236079002 - HAL1b LINE L1 -535 813 751 1931 151 3 0 chr2 17178303 17178614 -236077969 + AluSx SINE Alu 1 312 0 941 193 22 37 chr2 17178866 17179242 -236077341 - MER4C LTR ERV1 0 695 149 646 152 12 109 chr2 17179317 17179397 -236077186 - MER4C LTR ERV1 -316 149 92 202 28 28 28 chr2 17179397 17179433 -236077150 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 646 152 12 109 chr2 17179433 17179517 -236077066 - MER4C LTR ERV1 -373 92 1 576 246 80 6 chr2 17179746 17179921 -236076662 + L1MCa LINE L1 7 194 -6232 758 187 97 87 chr2 17179921 17180231 -236076352 - LTR48 LTR ERV1 0 787 475 2486 138 44 50 chr2 17180364 17180864 -236075719 + L1MC2 LINE L1 5833 6329 -15 2853 254 107 44 chr2 17180990 17183178 -236073405 + L1M4 LINE L1 2262 4619 -1527 1455 141 52 19 chr2 17183192 17183462 -236073121 - Tigger7 DNA MER2_type -1 2586 2308 370 250 12 0 chr2 17183465 17183545 -236073038 - Tigger7 DNA MER2_type -380 170 90 2563 126 40 75 chr2 17183551 17183898 -236072685 - L1PA16 LINE L1 -9 6157 5830 426 39 0 0 chr2 17183898 17183950 -236072633 + (TG)n Simple_repeat Simple_repeat 2 53 0 2563 126 40 75 chr2 17183950 17184096 -236072487 - L1PA16 LINE L1 -336 5830 5681 815 214 21 31 chr2 17184101 17184293 -236072290 + L1P LINE L1 4833 5022 -1124 582 162 9 9 chr2 17184294 17184399 -236072184 - Tigger7 DNA MER2_type -620 113 9 1247 271 40 4 chr2 17184410 17184863 -236071720 + L1M4 LINE L1 4639 5107 -1039 299 294 50 25 chr2 17185050 17185169 -236071414 - L2 LINE L2 0 3313 3192 2093 93 20 3 chr2 17186769 17187069 -236069514 - AluSq SINE Alu -8 305 1 310 316 115 0 chr2 17188495 17188634 -236067949 - MIR SINE MIR -6 256 102 401 382 51 0 chr2 17189025 17189203 -236067380 - L2 LINE L2 0 3272 3086 231 181 24 24 chr2 17190523 17190606 -236065977 + (TATATG)n Simple_repeat Simple_repeat 4 86 0 2283 104 0 0 chr2 17191284 17191583 -236065000 - AluSx SINE Alu -13 299 1 2948 112 73 20 chr2 17191780 17192270 -236064313 - MER1A DNA MER1_type -13 516 1 27 62 0 0 chr2 17192398 17192446 -236064137 + AT_rich Low_complexity Low_complexity 1 48 0 269 253 0 13 chr2 17192495 17192570 -236064013 + (TG)n Simple_repeat Simple_repeat 1 74 0 21 36 0 0 chr2 17192592 17192620 -236063963 + AT_rich Low_complexity Low_complexity 1 28 0 7161 49 5 2 chr2 17192640 17193623 -236062960 + L1PA5 LINE L1 5163 6148 -6 285 314 95 0 chr2 17193871 17193976 -236062607 + MIR SINE MIR 128 242 -20 2248 82 0 0 chr2 17194126 17194419 -236062164 + AluY SINE Alu 2 294 -17 1984 131 3 14 chr2 17195300 17195430 -236061153 + AluSx SINE Alu 1 131 -181 423 0 0 0 chr2 17195430 17195477 -236061106 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 1984 131 3 14 chr2 17195477 17195637 -236060946 + AluSx SINE Alu 131 288 -24 222 323 108 0 chr2 17195907 17196000 -236060583 + L2 LINE L2 3170 3272 0 388 313 21 28 chr2 17196048 17196192 -236060391 - MIR3 SINE MIR 0 208 66 205 350 50 12 chr2 17196467 17196547 -236060036 - MIR SINE MIR -109 99 17 2389 80 7 0 chr2 17196591 17196892 -236059691 + AluSc SINE Alu 1 303 -6 276 292 92 17 chr2 17197046 17197166 -236059417 - L2 LINE L2 -1 3312 3184 553 304 70 10 chr2 17201890 17202091 -236054492 - MIR SINE MIR -41 221 9 275 250 125 25 chr2 17202407 17202487 -236054096 + L2 LINE L2 3185 3272 0 23 0 0 0 chr2 17202860 17202883 -236053700 + AT_rich Low_complexity Low_complexity 1 23 0 392 336 93 22 chr2 17203381 17203607 -236052976 - MIR SINE MIR -2 260 19 1682 221 100 18 chr2 17204081 17204743 -236051840 - L1M4 LINE L1 -2896 3250 2535 741 219 6 0 chr2 17204752 17204921 -236051662 - L1MB7 LINE L1 -19 6165 5996 5501 55 25 1 chr2 17205270 17206004 -236050579 - L1PA7 LINE L1 -3 6151 5401 356 318 121 20 chr2 17206513 17206711 -236049872 - L3b LINE CR1 -227 1356 1139 183 356 58 0 chr2 17206808 17206895 -236049688 - MIR SINE MIR -122 140 49 692 207 29 23 chr2 17206895 17207069 -236049514 + MER5B DNA MER1_type 4 178 0 3471 164 17 5 chr2 17207075 17207735 -236048848 + L1PA13 LINE L1 4486 5153 -993 4703 125 6 31 chr2 17207766 17208600 -236047983 + L1PA13 LINE L1 5347 6159 -4 406 238 158 67 chr2 17208615 17208779 -236047804 - MER5A DNA MER1_type -1 188 10 684 297 8 1 chr2 17208798 17208975 -236047608 + MER5B DNA MER1_type 1 189 0 385 355 20 0 chr2 17209190 17209342 -236047241 + L3 LINE CR1 1255 1409 -168 889 289 76 65 chr2 17209415 17210113 -236046470 + L2 LINE L2 2457 3172 -141 522 279 8 0 chr2 17210102 17210224 -236046359 - L2 LINE L2 0 3313 3191 * 286 278 42 68 chr2 17210228 17210419 -236046164 + L2 LINE L2 3128 3313 0 589 233 92 18 chr2 17210547 17210649 -236045934 + MER5A DNA MER1_type 10 130 -59 1006 179 0 18 chr2 17210649 17210817 -236045766 - FAM SINE Alu -9 166 2 589 233 92 18 chr2 17210817 17210877 -236045706 + MER5A DNA MER1_type 130 184 -5 212 246 46 0 chr2 17210884 17210949 -236045634 - MIR3 SINE MIR -51 157 90 407 305 73 13 chr2 17211974 17212125 -236044458 + MIR SINE MIR 12 171 -91 208 284 91 2 chr2 17212630 17212711 -236043872 + MER5B DNA MER1_type 86 183 -6 586 340 47 13 chr2 17213248 17213483 -236043100 - MIR SINE MIR 0 262 20 201 229 0 0 chr2 17213755 17213803 -236042780 + CT-rich Low_complexity Low_complexity 4 51 0 338 353 191 13 chr2 17213885 17214188 -236042395 + L2 LINE L2 2897 3253 -19 2168 162 45 38 chr2 17215222 17215647 -236040936 - MSTA LTR MaLR 0 428 1 328 339 48 58 chr2 17215652 17215841 -236040742 + L2 LINE L2 3125 3311 -2 215 77 51 51 chr2 17215864 17215903 -236040680 - MIR SINE MIR -106 156 118 191 369 0 0 chr2 17216653 17216718 -236039865 - L2 LINE L2 -62 3210 3146 221 322 0 0 chr2 17217362 17217421 -236039162 - L2 LINE L2 -51 3221 3163 492 321 71 19 chr2 17217617 17217829 -236038754 - MIR SINE MIR -28 234 12 619 200 36 6 chr2 17219105 17219270 -236037313 + L1ME3 LINE L1 5786 5955 -207 211 263 145 0 chr2 17219361 17219437 -236037146 + L2 LINE L2 2935 3021 -251 2457 71 0 0 chr2 17219619 17219915 -236036668 - AluY SINE Alu -15 296 1 220 333 83 0 chr2 17220800 17220896 -236035687 + MIR SINE MIR 51 133 -75 456 312 91 74 chr2 17221642 17221995 -236034588 - L2 LINE L2 0 3272 2914 4320 181 25 22 chr2 17222888 17223857 -236032726 + L1MA9 LINE L1 5341 6312 0 1061 273 52 9 chr2 17224545 17225043 -236031540 + MER69 DNA AcHobo 8 568 -658 638 236 239 14 chr2 17225031 17225458 -236031125 + MER69 DNA AcHobo 2000 2522 -4 * 204 301 12 36 chr2 17226684 17226767 -236029816 + MIR SINE MIR 54 134 -74 437 201 65 26 chr2 17226921 17227075 -236029508 - MER103 DNA DNA -4 162 3 438 88 0 0 chr2 17227760 17227828 -236028755 + (TGGA)n Simple_repeat Simple_repeat 2 69 0 191 284 30 0 chr2 17228048 17228115 -236028468 - L2 LINE L2 -73 3240 3172 288 363 79 46 chr2 17228815 17229184 -236027399 - L2 LINE L2 -663 2651 2271 251 324 19 0 chr2 17229278 17229383 -236027200 - MIR SINE MIR -10 252 146 647 270 157 22 chr2 17229390 17229620 -236026963 + MIR SINE MIR 2 262 0 256 291 10 29 chr2 17229600 17229703 -236026880 - MIR SINE MIR -93 169 69 * 227 386 26 33 chr2 17230894 17231047 -236025536 + MIR3 SINE MIR 52 203 -5 251 0 59 0 chr2 17231623 17231657 -236024926 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 2247 109 0 0 chr2 17231738 17232040 -236024543 + AluSx SINE Alu 3 304 -8 192 256 0 0 chr2 17232210 17232253 -236024330 + L2 LINE L2 3262 3304 -9 2572 144 86 46 chr2 17233182 17233878 -236022705 + pTR5 LTR ERV1 743 1466 -972 3857 112 108 101 chr2 17234302 17235687 -236020896 + pTR5 LTR ERV1 66 2438 0 314 339 188 14 chr2 17235924 17236254 -236020329 + L2 LINE L2 2716 3090 -182 21 57 0 0 chr2 17237290 17237325 -236019258 + AT_rich Low_complexity Low_complexity 1 35 0 23 54 0 0 chr2 17238425 17238462 -236018121 + AT_rich Low_complexity Low_complexity 1 37 0 195 364 64 69 chr2 17240968 17241405 -236015178 - L2 LINE L2 -14 3258 2824 546 153 14 10 chr2 17241447 17241740 -236014843 + (TA)n Simple_repeat Simple_repeat 1 294 0 343 37 19 19 chr2 17243207 17243261 -236013322 + (TG)n Simple_repeat Simple_repeat 2 55 0 316 183 19 77 chr2 17243264 17243368 -236013215 - LTR50 LTR ERVL -3 792 695 445 211 46 11 chr2 17243636 17243745 -236012838 - MLT1E1 LTR MaLR -128 509 347 345 246 140 9 chr2 17243775 17243889 -236012694 - MLT1E1 LTR MaLR -349 277 149 1856 194 7 65 chr2 17243997 17244415 -236012168 - MSTD LTR MaLR -2 394 1 908 205 82 61 chr2 17245031 17245324 -236011259 + MLT1E2 LTR MaLR 1 299 -327 652 243 24 12 chr2 17245346 17245515 -236011068 + MLT1E2 LTR MaLR 402 572 -52 1532 121 8 4 chr2 17245515 17245764 -236010819 - L1PA6 LINE L1 0 6154 5905 5241 48 3 12 chr2 17245868 17246875 -236009708 - L1PA6 LINE L1 -245 5909 4912 254 173 0 120 chr2 17246877 17246952 -236009631 + MLT1E2 LTR MaLR 559 624 0 219 88 0 0 chr2 17247089 17247123 -236009460 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 290 359 23 16 chr2 17248054 17248182 -236008401 + MIR SINE MIR 12 140 -122 280 303 22 34 chr2 17248487 17248576 -236008007 + L2 LINE L2 3185 3272 0 528 239 50 70 chr2 17249167 17249368 -236007215 - MLT1D LTR MaLR -286 219 23 2394 251 45 20 chr2 17249406 17250210 -236006373 + L1ME3A LINE L1 3611 4434 -1712 11903 200 45 20 chr2 17250249 17251016 -236005567 - L1MA9 LINE L1 -256 7077 6330 198 0 0 0 chr2 17251016 17251038 -236005545 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 11903 200 45 20 chr2 17251038 17251267 -236005316 - L1MA9 LINE L1 -1003 6330 6108 2583 40 0 0 chr2 17251267 17251566 -236005017 + AluY SINE Alu 1 299 -12 11903 200 45 20 chr2 17251566 17254284 -236002299 - L1MA9 LINE L1 -1225 6108 3275 1857 222 78 50 chr2 17254277 17254606 -236001977 - L1MA9 LINE L1 -4517 2581 2262 * 1748 185 13 0 chr2 17254606 17254908 -236001675 - AluJb SINE Alu -6 306 1 1857 222 78 50 chr2 17254908 17254931 -236001652 - L1MA9 LINE L1 -4836 2262 2241 2191 102 10 3 chr2 17254931 17255225 -236001358 - AluSg SINE Alu -14 296 1 1857 222 78 50 chr2 17255225 17255500 -236001083 - L1MA9 LINE L1 -4857 2241 1975 261 0 0 0 chr2 17255500 17255529 -236001054 + (TG)n Simple_repeat Simple_repeat 2 30 0 1857 222 78 50 chr2 17255529 17255834 -236000749 - L1MA9 LINE L1 -5123 1975 1675 300 264 55 142 chr2 17255954 17256265 -236000318 - L1MA9 LINE L1 -5552 1616 1333 238 349 6 40 chr2 17256470 17256645 -235999938 - L1MA9 LINE L1 -5967 1131 963 1761 221 18 37 chr2 17256653 17257164 -235999419 + L1ME3A LINE L1 4862 5362 -784 2014 268 25 2 chr2 17257165 17257736 -235998847 + L1ME1 LINE L1 5578 6161 -5 260 70 23 0 chr2 17257893 17257936 -235998647 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 687 148 35 0 chr2 17257936 17258051 -235998532 - AluSp/q SINE Alu -32 281 163 1420 131 4 48 chr2 17258053 17258282 -235998301 - AluSp SINE Alu -94 219 1 1381 287 123 21 chr2 17258320 17259063 -235997520 + L1ME3A LINE L1 5347 6164 -6 24 53 0 0 chr2 17259597 17259635 -235996948 + AT_rich Low_complexity Low_complexity 1 38 0 330 295 84 0 chr2 17260141 17260236 -235996347 + L2 LINE L2 3208 3310 -3 184 268 18 0 chr2 17261680 17261736 -235994847 - MIR SINE MIR 0 262 206 1520 199 7 24 chr2 17262225 17262517 -235994066 + AluJo SINE Alu 1 287 -25 26 0 0 0 chr2 17262519 17262545 -235994038 + AT_rich Low_complexity Low_complexity 1 26 0 185 279 23 0 chr2 17263726 17263769 -235992814 + L2 LINE L2 3210 3253 -19 203 279 114 57 chr2 17264012 17264170 -235992413 - MIR3 SINE MIR -6 202 36 30 0 0 0 chr2 17264867 17264897 -235991686 + AT_rich Low_complexity Low_complexity 1 30 0 2991 97 4 21 chr2 17264898 17265363 -235991220 - L1MA3 LINE L1 -1 6304 5848 252 0 0 0 chr2 17265903 17265931 -235990652 + (A)n Simple_repeat Simple_repeat 1 28 0 279 0 0 0 chr2 17266537 17266568 -235990015 + (GA)n Simple_repeat Simple_repeat 2 32 0 1562 167 12 87 chr2 17267298 17267633 -235988950 + AluJb SINE Alu 1 310 -2 269 260 0 10 chr2 17267660 17267760 -235988823 + GA-rich Low_complexity Low_complexity 1 99 0 495 294 77 28 chr2 17269006 17269084 -235987499 + MLT1I LTR MaLR 63 136 -273 2511 118 37 55 chr2 17269084 17269518 -235987065 - MSTA LTR MaLR -2 426 1 495 294 77 28 chr2 17269518 17269687 -235986896 + MLT1I LTR MaLR 136 322 -87 2059 137 23 3 chr2 17269695 17270001 -235986582 - AluSx SINE Alu 0 312 1 298 342 27 27 chr2 17270676 17270787 -235985796 + L2 LINE L2 3162 3272 0 311 306 136 14 chr2 17271458 17271605 -235984978 + MIR SINE MIR 36 200 -62 2277 119 26 98 chr2 17272820 17273281 -235983302 + MSTA LTR MaLR 1 428 0 286 258 55 9 chr2 17273374 17273483 -235983100 + MIR SINE MIR 37 155 -66 5167 117 24 10 chr2 17273907 17274716 -235981867 + L1PA15 LINE L1 5346 6165 0 371 209 93 71 chr2 17274722 17274904 -235981679 + L1M4 LINE L1 4614 4799 -1347 447 276 30 15 chr2 17276331 17276465 -235980118 + MIR SINE MIR 126 261 -1 21 0 0 0 chr2 17276504 17276525 -235980058 + AT_rich Low_complexity Low_complexity 1 21 0 601 285 150 74 chr2 17277393 17278764 -235977819 + L1MDa LINE L1 897 2254 -841 828 220 31 63 chr2 17278921 17279176 -235977407 + LTR55 LTR ERV 4 250 -298 2212 191 51 8 chr2 17279180 17279689 -235976894 - L1 LINE L1 -1861 4285 3755 343 357 64 11 chr2 17280319 17280585 -235975998 + L1ME LINE L1 4722 5001 -1145 54 62 0 0 chr2 17280721 17280817 -235975766 + AT_rich Low_complexity Low_complexity 1 96 0 324 284 131 17 chr2 17280839 17281075 -235975508 + L1ME LINE L1 5542 5804 -317 2359 75 10 0 chr2 17281297 17281602 -235974981 - AluYa5 SINE Alu -3 308 1 463 208 47 9 chr2 17281975 17282081 -235974502 - MER81 DNA DNA -2 112 3 390 259 103 14 chr2 17282515 17282672 -235973911 - MIR SINE MIR -54 208 41 22 0 0 0 chr2 17282933 17282955 -235973628 + AT_rich Low_complexity Low_complexity 1 22 0 189 362 0 0 chr2 17283509 17283567 -235973016 - L2 LINE L2 -220 3052 2995 306 0 0 0 chr2 17285134 17285168 -235971415 + (A)n Simple_repeat Simple_repeat 1 34 0 279 0 0 0 chr2 17285773 17285804 -235970779 + (GA)n Simple_repeat Simple_repeat 2 32 0 362 127 32 0 chr2 17286749 17286812 -235969771 + MER53 DNA DNA 124 188 -1 303 318 47 0 chr2 17287077 17287206 -235969377 + MIR SINE MIR 64 198 -64 184 277 0 46 chr2 17287282 17287347 -235969236 + L2 LINE L2 3252 3313 0 2193 120 0 7 chr2 17287633 17287941 -235968642 + AluSq SINE Alu 1 306 -7 228 234 32 117 chr2 17288043 17288137 -235968446 + L2 LINE L2 3226 3311 -2 232 209 0 0 chr2 17288140 17288183 -235968400 - MIR SINE MIR 0 262 220 497 292 81 89 chr2 17288190 17288735 -235967848 + L2 LINE L2 2738 3272 0 278 327 161 47 chr2 17290609 17291013 -235965570 + L2 LINE L2 2336 2785 -529 372 71 0 0 chr2 17291583 17291639 -235964944 + (TC)n Simple_repeat Simple_repeat 2 57 0 258 56 0 0 chr2 17291639 17291675 -235964908 + (CA)n Simple_repeat Simple_repeat 1 36 0 201 290 16 16 chr2 17292626 17292688 -235963895 - MIR SINE MIR -5 257 196 465 133 0 0 chr2 17292690 17292765 -235963818 + (CA)n Simple_repeat Simple_repeat 2 76 0 328 319 0 0 chr2 17292778 17292872 -235963711 - MIR SINE MIR -73 189 96 363 347 102 27 chr2 17293429 17293878 -235962705 + L2 LINE L2 1491 1973 -1341 258 294 0 0 chr2 17293953 17294021 -235962562 - L2 LINE L2 -1 3312 3245 2065 120 7 7 chr2 17294203 17294502 -235962081 - AluSx SINE Alu -13 299 1 538 143 11 0 chr2 17294678 17294769 -235961814 + L1PB1 LINE L1 5691 5782 -369 2485 117 5 3 chr2 17295800 17296177 -235960406 + L1PB1 LINE L1 5769 6146 -5 442 329 41 62 chr2 17296256 17296751 -235959832 - L2 LINE L2 -226 3046 2555 189 0 0 0 chr2 17297678 17297699 -235958884 + (TTA)n Simple_repeat Simple_repeat 1 21 0 881 159 29 58 chr2 17299321 17299529 -235957054 + MLT1A1 LTR MaLR 1 202 -163 393 233 117 0 chr2 17299554 17299657 -235956926 - MER45 DNA AcHobo -61 117 3 228 326 28 85 chr2 17299793 17299934 -235956649 + MIR3 SINE MIR 3 135 -73 216 333 12 12 chr2 17299926 17300010 -235956573 + MER5A DNA MER1_type 85 168 -21 * 237 250 18 0 chr2 17299959 17300015 -235956568 - MER5B DNA MER1_type -105 73 17 3952 145 38 16 chr2 17300529 17301259 -235955324 - L1MC1 LINE L1 0 6333 5588 618 294 42 32 chr2 17301283 17301862 -235954721 - L1ME LINE L1 -358 5804 5218 351 282 125 32 chr2 17301895 17302143 -235954440 - L1ME LINE L1 -1119 5027 4757 946 152 28 128 chr2 17302200 17302450 -235954133 - L1MC1 LINE L1 -87 6246 6022 358 244 12 0 chr2 17302452 17302538 -235954045 + Charlie5 DNA MER1_type 15 101 -2511 833 267 96 81 chr2 17302712 17303390 -235953193 - L1ME LINE L1 -2749 3397 2710 2653 99 7 24 chr2 17303482 17303907 -235952676 - MER11C LTR ERVK 0 1071 654 1540 202 67 21 chr2 17304019 17304395 -235952188 - MER52A LTR ERV1 -1362 393 1 238 255 20 10 chr2 17305416 17305518 -235951065 + L1MEc LINE L1 829 931 -5465 24 0 0 0 chr2 17305750 17305774 -235950809 + AT_rich Low_complexity Low_complexity 1 24 0 416 305 138 34 chr2 17306412 17306681 -235949902 - MLT1J1 LTR MaLR -23 423 127 643 162 0 0 chr2 17307107 17307212 -235949371 + AluSg/x SINE Alu 197 301 -11 247 209 174 0 chr2 17307545 17307660 -235948923 - L1ME LINE L1 -220 5901 5767 244 235 0 44 chr2 17307712 17307780 -235948803 - MIR SINE MIR -67 195 131 852 286 11 34 chr2 17309867 17310129 -235946454 + MIR SINE MIR 2 257 -5 270 347 27 48 chr2 17310529 17310676 -235945907 - MIR3 SINE MIR -7 201 58 2013 147 7 0 chr2 17310688 17311104 -235945479 + L1PA15 LINE L1 5392 5981 -184 441 310 28 0 chr2 17311168 17311313 -235945270 - L2 LINE L2 0 3313 3165 1235 153 0 5 chr2 17311364 17311573 -235945010 + L1PA15 LINE L1 5955 6162 -3 284 294 18 28 chr2 17313211 17313320 -235943263 + MIR SINE MIR 155 262 0 1470 306 117 24 chr2 17314902 17315049 -235941534 - L2 LINE L2 -10 3303 3171 2465 191 2 23 chr2 17315049 17315521 -235941062 - MER88 LTR ERVL 0 464 3 1470 306 117 24 chr2 17315521 17316288 -235940295 - L2 LINE L2 -142 3171 2302 293 307 128 46 chr2 17316633 17316851 -235939732 - L2 LINE L2 -58 3214 2979 209 298 93 26 chr2 17317366 17317517 -235939066 + L2 LINE L2 2851 3011 -261 2112 123 3 0 chr2 17317706 17317998 -235938585 + AluSq SINE Alu 17 309 -4 485 282 70 40 chr2 17318753 17318980 -235937603 - MIR SINE MIR -8 254 21 637 286 17 0 chr2 17319969 17320147 -235936436 - MIR SINE MIR -10 252 72 1426 114 5 9 chr2 17320152 17320371 -235936212 + MER30 DNA MER1_type 13 230 0 376 302 130 47 chr2 17320373 17320602 -235935981 - HAL1 LINE L1 -1148 1359 1098 695 226 0 0 chr2 17320602 17320717 -235935866 - FLAM_A SINE Alu -18 115 1 376 302 130 47 chr2 17320717 17320788 -235935795 - HAL1 LINE L1 -1409 1098 1034 219 171 0 0 chr2 17321099 17321134 -235935449 + (CATATA)n Simple_repeat Simple_repeat 4 38 0 1666 187 15 80 chr2 17321818 17322229 -235934354 - MLT1B LTR MaLR -6 384 1 523 270 119 11 chr2 17322229 17322414 -235934169 - L2 LINE L2 -1008 2306 2102 187 143 0 0 chr2 17322930 17322958 -235933625 - L2 LINE L2 -5 3267 3240 236 315 41 14 chr2 17323160 17323233 -235933350 + L3b LINE CR1 1507 1581 -2 2115 112 10 3 chr2 17324874 17325170 -235931413 - AluSq SINE Alu -15 298 1 187 315 83 46 chr2 17325179 17325287 -235931296 + L2 LINE L2 3202 3313 0 414 309 7 0 chr2 17325594 17325746 -235930837 - LTR16B LTR ERVL -303 161 9 225 328 124 48 chr2 17326644 17326958 -235929625 - L2 LINE L2 -23 3249 2912 416 256 88 37 chr2 17327464 17327549 -235929034 + L1M4 LINE L1 2944 3023 -3123 2016 126 28 0 chr2 17327549 17327834 -235928749 + AluSx SINE Alu 1 293 -19 416 256 88 37 chr2 17327834 17328021 -235928562 + L1M4 LINE L1 3023 3230 -2916 909 262 77 5 chr2 17328083 17328472 -235928111 + L1M4 LINE L1 3364 3780 -2366 204 133 50 0 chr2 17328544 17328604 -235927979 + (TA)n Simple_repeat Simple_repeat 1 63 0 542 240 109 66 chr2 17328807 17329284 -235927299 + MLT1F LTR MaLR 88 529 -13 269 303 42 34 chr2 17330093 17330212 -235926371 + L2 LINE L2 3160 3279 -34 328 338 93 36 chr2 17330303 17330442 -235926141 + L2 LINE L2 3124 3270 -2 279 312 124 25 chr2 17330608 17330769 -235925814 - MIR SINE MIR -50 212 35 204 270 22 34 chr2 17330846 17330935 -235925648 + MIR SINE MIR 78 165 -97 58 87 0 0 chr2 17330950 17331099 -235925484 + AT_rich Low_complexity Low_complexity 1 149 0 395 323 55 0 chr2 17332015 17332142 -235924441 - MIR SINE MIR -109 153 20 274 322 59 0 chr2 17332504 17332622 -235923961 - MIR3 SINE MIR -26 182 58 452 210 0 10 chr2 17332662 17332762 -235923821 + MER94 DNA DNA 2 100 -34 752 259 44 35 chr2 17332829 17333057 -235923526 - MIR SINE MIR -21 241 12 198 250 132 0 chr2 17333215 17333291 -235923292 + MIR3 SINE MIR 98 183 -25 338 362 80 0 chr2 17333453 17333616 -235922967 - MIR SINE MIR -82 180 5 1686 195 0 16 chr2 17337415 17337722 -235918861 + AluJo SINE Alu 1 302 -10 2186 100 0 0 chr2 17337786 17338102 -235918481 - AluSg SINE Alu 0 316 1 428 251 82 41 chr2 17338423 17338594 -235917989 - MER5B DNA MER1_type 0 178 1 686 279 5 15 chr2 17339774 17339975 -235916608 + MER58A DNA MER1_type 1 199 -25 253 364 46 13 chr2 17340909 17341060 -235915523 + MIR SINE MIR 77 232 -30 2137 111 16 16 chr2 17341201 17341507 -235915076 - AluSp SINE Alu -7 306 1 869 235 98 125 chr2 17341591 17342161 -235914422 - MLT1H1 LTR MaLR 0 555 1 462 305 69 20 chr2 17342522 17342725 -235913858 - MIR SINE MIR -30 232 20 352 176 20 0 chr2 17343668 17343770 -235912813 + (CA)n Simple_repeat Simple_repeat 2 105 0 419 217 66 38 chr2 17344057 17344163 -235912420 - MER103 DNA DNA -53 113 5 300 235 154 22 chr2 17344402 17344538 -235912045 - MIR3 SINE MIR -21 187 34 2968 75 6 3 chr2 17345087 17345448 -235911135 - THE1B LTR MaLR 0 364 3 196 310 86 0 chr2 17347181 17347239 -235909344 - L3 LINE CR1 -12 1565 1503 674 235 12 53 chr2 17347258 17347428 -235909155 + MER45A DNA AcHobo 16 178 0 203 133 0 0 chr2 17347590 17347620 -235908963 + (TGGA)n Simple_repeat Simple_repeat 1 30 0 531 243 107 6 chr2 17348049 17348218 -235908365 - MIR SINE MIR -2 260 75 507 357 38 13 chr2 17348305 17348540 -235908043 - L3 LINE CR1 -87 1490 1250 438 311 0 25 chr2 17348712 17348831 -235907752 - MIR SINE MIR -133 129 14 24 0 0 0 chr2 17349381 17349405 -235907178 + AT_rich Low_complexity Low_complexity 1 24 0 633 299 61 34 chr2 17352487 17352815 -235903768 - MLT1K LTR MaLR -8 580 244 1450 182 48 4 chr2 17353148 17353417 -235903166 + MLT2B1 LTR ERVL 1 281 -239 332 297 18 45 chr2 17353518 17353629 -235902954 - L3 LINE CR1 -840 737 630 742 170 57 19 chr2 17353663 17353822 -235902761 + MLT2B2 LTR ERVL 332 496 -19 206 265 33 26 chr2 17354000 17354151 -235902432 + (CACCC)n Simple_repeat Simple_repeat 5 156 0 272 246 55 82 chr2 17354366 17354476 -235902107 + L2 LINE L2 3203 3309 -4 346 358 128 20 chr2 17354482 17354926 -235901657 - L3 LINE CR1 -814 763 272 519 327 43 14 chr2 17355244 17355455 -235901128 - MIR SINE MIR 0 262 46 208 295 196 18 chr2 17355867 17355979 -235900604 + L2 LINE L2 3140 3271 -1 330 191 107 12 chr2 17357011 17357095 -235899488 - MER81 DNA DNA -3 111 20 324 168 76 0 chr2 17357445 17357576 -235899007 + (TA)n Simple_repeat Simple_repeat 2 142 0 646 338 100 30 chr2 17357890 17358412 -235898171 - L2 LINE L2 0 3313 2761 6161 177 47 29 chr2 17358427 17359148 -235897435 - L1MC3 LINE L1 -6 7779 7024 183 100 0 0 chr2 17359148 17359178 -235897405 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 6161 177 47 29 chr2 17359178 17359700 -235896883 - L1MC3 LINE L1 -761 7024 6513 294 36 455 0 chr2 17359749 17359804 -235896779 - MADE1 DNA Mariner 0 80 1 5033 222 16 9 chr2 17359826 17360922 -235895661 - L1MC3 LINE L1 -1238 6547 5445 555 315 79 21 chr2 17361148 17361427 -235895156 - MER102b DNA MER1_type 0 341 47 437 320 132 30 chr2 17361505 17361839 -235894744 - L2 LINE L2 -568 2746 2379 505 312 3 4 chr2 17361841 17362006 -235894577 - MIR SINE MIR -15 193 30 2136 176 90 9 chr2 17363061 17363493 -235893090 - MLT1C LTR MaLR 0 467 1 252 0 0 0 chr2 17364040 17364068 -235892515 + (TC)n Simple_repeat Simple_repeat 1 28 0 2264 159 63 0 chr2 17365461 17365812 -235890771 + MER83C LTR ERV1 1 373 0 264 302 108 23 chr2 17366486 17366615 -235889968 + MIR SINE MIR 2 141 -121 221 306 16 0 chr2 17366677 17366739 -235889844 + L2 LINE L2 3188 3250 -22 709 266 112 17 chr2 17366889 17367122 -235889461 + MIR SINE MIR 8 262 0 262 149 43 0 chr2 17367437 17367484 -235889099 - L2 LINE L2 0 3313 3265 1293 194 164 27 chr2 17368525 17368890 -235887693 - Tigger5 DNA MER2_type 0 2323 4 309 216 182 0 chr2 17369006 17369094 -235887489 + MER5A DNA MER1_type 83 186 -3 354 244 35 0 chr2 17369190 17369276 -235887307 - L2 LINE L2 -2044 1270 1182 608 159 10 3 chr2 17369276 17369395 -235887188 + MLT1D LTR MaLR 350 505 0 573 291 119 0 chr2 17369438 17369648 -235886935 + MLT1J2 LTR MaLR 198 432 -18 1817 152 31 58 chr2 17371550 17371931 -235884652 + MLT1B LTR MaLR 20 390 0 214 278 28 14 chr2 17372274 17372346 -235884237 + L2 LINE L2 3240 3312 -1 227 412 76 0 chr2 17372410 17372541 -235884042 - L2 LINE L2 -5 3267 3127 253 330 11 0 chr2 17372879 17372967 -235883616 - MER94 DNA DNA 0 134 46 773 136 0 14 chr2 17423146 17423286 -235833297 + L1MA4 LINE L1 6159 6296 -4 182 293 147 13 chr2 17423446 17423521 -235833062 + L2 LINE L2 3187 3271 -1 212 338 27 0 chr2 17423721 17423795 -235832788 + L2 LINE L2 2978 3053 -219 6592 115 15 18 chr2 17424512 17426215 -235830368 - L1MA3 LINE L1 0 6305 4605 302 283 57 38 chr2 17426275 17426381 -235830202 - MIR3 SINE MIR -41 167 60 360 312 39 54 chr2 17427666 17427871 -235828712 - L2 LINE L2 0 3313 3112 192 254 79 16 chr2 17428023 17428086 -235828497 + L2 LINE L2 2969 3035 -237 953 70 0 0 chr2 17429080 17429209 -235827374 - L1PBa LINE L1 -6728 135 7 2697 23 0 0 chr2 17429209 17429513 -235827070 - AluYa5 SINE Alu -7 304 1 268 275 64 9 chr2 17430007 17430116 -235826467 - MIR SINE MIR -78 130 16 306 316 65 36 chr2 17430620 17430759 -235825824 + L2 LINE L2 3125 3267 -5 26 30 0 0 chr2 17430970 17431003 -235825580 + AT_rich Low_complexity Low_complexity 1 33 0 336 348 76 8 chr2 17431695 17431813 -235824770 - MIR SINE MIR -59 149 24 490 259 265 6 chr2 17433106 17433276 -235823307 - MIR SINE MIR -33 229 16 239 182 0 0 chr2 17433398 17433442 -235823141 + MIR SINE MIR 109 152 -110 365 310 47 51 chr2 17433585 17433840 -235822743 + HERVL LTR ERVL 2511 2764 -2890 262 288 68 0 chr2 17436639 17436712 -235819871 + MIR SINE MIR 46 123 -139 211 196 0 43 chr2 17437562 17437608 -235818975 - MIR SINE MIR 0 262 219 185 306 124 33 chr2 17438122 17438243 -235818340 - MIR SINE MIR -116 146 15 358 309 59 25 chr2 17439467 17439703 -235816880 + L1MC5 LINE L1 4360 4603 -1543 648 240 0 0 chr2 17439704 17439883 -235816700 + (TA)n Simple_repeat Simple_repeat 2 180 0 235 289 0 0 chr2 17439890 17439980 -235816603 - L1MC4 LINE L1 -1339 6703 6614 25 0 0 0 chr2 17440024 17440049 -235816534 + AT_rich Low_complexity Low_complexity 1 25 0 198 0 0 0 chr2 17440071 17440093 -235816490 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2383 112 27 3 chr2 17440146 17440512 -235816071 + THE1C LTR MaLR 1 375 0 6514 182 128 62 chr2 17440512 17441985 -235814598 + THE1C-int LTR MaLR 1 1571 -9 2193 134 21 21 chr2 17441995 17442368 -235814215 + THE1C LTR MaLR 3 375 0 1335 193 0 0 chr2 17442369 17442623 -235813960 - L1 LINE L1 -1797 4349 4096 * 5905 162 7 4 chr2 17442615 17444316 -235812267 + L1PB1 LINE L1 4437 6146 -5 33 25 0 0 chr2 17444323 17444363 -235812220 + AT_rich Low_complexity Low_complexity 1 40 0 1702 99 63 0 chr2 17444363 17444649 -235811934 + L1PA14 LINE L1 5884 6185 0 1833 271 58 38 chr2 17444748 17445462 -235811121 + L1MC5 LINE L1 4762 5066 -1080 2174 99 7 13 chr2 17445462 17445765 -235810818 - AluSx SINE Alu -11 301 1 1833 271 58 38 chr2 17445765 17446111 -235810472 + L1MC5 LINE L1 5066 5403 -743 1120 245 82 68 chr2 17446389 17446964 -235809619 + L1MC5 LINE L1 6637 7219 -742 229 219 94 0 chr2 17447091 17447155 -235809428 + L1MC5 LINE L1 7275 7344 -617 289 164 194 0 chr2 17447155 17447222 -235809361 + MER116 DNA Mariner 1 80 0 585 258 70 58 chr2 17447227 17447696 -235808887 + L1MC5 LINE L1 7357 7831 -130 1239 258 101 90 chr2 17448499 17448741 -235807842 + MLT1E LTR MaLR 1 239 -354 2808 148 6 48 chr2 17448741 17449236 -235807347 + MER101 LTR ERV1 1 474 0 1239 258 101 90 chr2 17449236 17449529 -235807054 + MLT1E LTR MaLR 239 542 -51 228 370 0 0 chr2 17449875 17449948 -235806635 - L2 LINE L2 0 3272 3200 234 136 0 0 chr2 17450182 17450226 -235806357 + (A)n Simple_repeat Simple_repeat 1 44 0 29 70 0 0 chr2 17450642 17450699 -235805884 + AT_rich Low_complexity Low_complexity 1 57 0 365 276 179 24 chr2 17451109 17451490 -235805093 - L1M4 LINE L1 -2535 3611 3172 4729 209 40 10 chr2 17451716 17452430 -235804153 - L1 LINE L1 -2546 3600 2836 2040 148 0 6 chr2 17452430 17452741 -235803842 - AluSq SINE Alu -4 309 1 4729 209 40 10 chr2 17452741 17453187 -235803396 - L1 LINE L1 -3310 2836 2405 8654 171 17 13 chr2 17453201 17455880 -235800703 + L1MA5A LINE L1 3595 6280 -17 282 302 112 39 chr2 17455910 17456241 -235800342 - L1M4 LINE L1 -3385 2761 2407 1869 152 19 45 chr2 17456333 17456707 -235799876 + THE1B LTR MaLR 1 364 0 11313 108 10 1 chr2 17456707 17458272 -235798311 + THE1B-int LTR MaLR 1 1579 -1 1861 152 16 51 chr2 17458274 17458649 -235797934 + THE1B LTR MaLR 3 364 0 283 256 60 15 chr2 17458650 17458783 -235797800 - L1M4 LINE L1 -3861 2285 2147 1495 193 0 40 chr2 17459065 17459387 -235797196 - AluJb SINE Alu -3 309 1 884 274 129 11 chr2 17459442 17459822 -235796761 + LTR16B LTR ERVL 38 462 -2 2239 116 48 22 chr2 17461093 17461448 -235795135 + THE1B LTR MaLR 1 364 0 336 302 88 25 chr2 17461603 17461762 -235794821 - L1M4 LINE L1 -786 5360 5192 189 308 13 26 chr2 17461883 17461961 -235794622 + MIR SINE MIR 30 106 -102 273 333 54 0 chr2 17462075 17462168 -235794415 - MIR SINE MIR -142 120 23 349 296 100 1 chr2 17462551 17462696 -235793887 - MIR SINE MIR -14 248 90 236 300 121 66 chr2 17464044 17464317 -235792266 + L2 LINE L2 2447 2734 -580 313 319 65 36 chr2 17464349 17464487 -235792096 + MER5A DNA MER1_type 1 142 -47 557 299 110 39 chr2 17464877 17465158 -235791425 + L1MEd LINE L1 425 725 -5394 1605 235 27 64 chr2 17465260 17465821 -235790762 + L1MC5 LINE L1 6695 7234 -727 848 228 97 20 chr2 17465841 17466181 -235790402 + L1MC5 LINE L1 7250 7524 -437 1402 182 119 62 chr2 17466181 17466550 -235790033 - MLT1B LTR MaLR 0 390 1 2160 187 24 22 chr2 17466564 17466981 -235789602 - MLT1B-int LTR MaLR -15 1356 939 388 253 21 0 chr2 17466997 17467092 -235789491 - MLT1B LTR MaLR -291 99 3 316 262 90 0 chr2 17467092 17467214 -235789369 + L1MC5 LINE L1 7516 7648 -313 5643 135 28 8 chr2 17467240 17468202 -235788381 + L1MA5 LINE L1 5316 6296 -4 557 224 88 18 chr2 17468223 17468451 -235788132 + L1MC5 LINE L1 7683 7926 -35 253 301 18 0 chr2 17468608 17468721 -235787862 + L1ME3A LINE L1 4537 4651 -1495 282 143 0 0 chr2 17468782 17468831 -235787752 + (GAA)n Simple_repeat Simple_repeat 2 50 0 424 313 107 8 chr2 17468847 17469109 -235787474 + L1ME3A LINE L1 4712 4999 -1147 5880 318 82 14 chr2 17469219 17470700 -235785883 + L2 LINE L2 92 1790 -1524 180 0 0 0 chr2 17470700 17470720 -235785863 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 5880 318 82 14 chr2 17470720 17471559 -235785024 + L2 LINE L2 1790 2570 -744 1609 218 56 127 chr2 17471562 17472309 -235784274 - LTR8A LTR ERV1 0 727 34 760 250 154 11 chr2 17472397 17472804 -235783779 + L2 LINE L2 2754 3235 -78 25 108 0 0 chr2 17472868 17472970 -235783613 + AT_rich Low_complexity Low_complexity 1 102 0 1044 282 52 63 chr2 17473097 17473619 -235782964 + L1ME3A LINE L1 5333 5848 -322 309 300 150 22 chr2 17474741 17474999 -235781584 + L2 LINE L2 2791 3084 -188 218 216 14 0 chr2 17476891 17476965 -235779618 + (TA)n Simple_repeat Simple_repeat 1 75 0 899 152 28 0 chr2 17480281 17480466 -235776117 - AluSc SINE Alu 0 320 132 2048 88 35 0 chr2 17480466 17480750 -235775833 - AluY SINE Alu -17 294 1 585 264 159 42 chr2 17482679 17483217 -235773366 + L1ME4a LINE L1 5373 5955 -166 346 270 9 61 chr2 17483282 17483397 -235773186 - L2 LINE L2 -47 3266 3158 334 218 52 15 chr2 17483680 17483783 -235772800 + MIR SINE MIR 42 153 -68 489 342 35 5 chr2 17483923 17484122 -235772461 - MIR SINE MIR 0 262 58 230 299 23 23 chr2 17484537 17484624 -235771959 + MIR SINE MIR 38 124 -84 282 106 0 0 chr2 17484839 17484886 -235771697 + (CA)n Simple_repeat Simple_repeat 1 47 0 22 35 0 0 chr2 17485546 17485575 -235771008 + AT_rich Low_complexity Low_complexity 1 29 0 182 217 87 0 chr2 17485821 17485867 -235770716 + MIR SINE MIR 122 171 -91 1666 169 180 96 chr2 17486009 17486602 -235769981 + L1ME2 LINE L1 5344 5986 -178 396 280 69 52 chr2 17486786 17487208 -235769375 - L1 LINE L1 -3045 3101 2673 484 304 77 0 chr2 17487531 17487738 -235768845 + Charlie8 DNA MER1_type 1570 1792 -625 533 230 44 88 chr2 17489361 17489587 -235766996 - L2 LINE L2 -1 3312 3097 2175 110 3 0 chr2 17490102 17490393 -235766190 + AluSq SINE Alu 1 292 -21 1824 186 39 14 chr2 17490720 17491135 -235765448 - L1PBa LINE L1 -5834 1029 605 1395 246 99 8 chr2 17491148 17491644 -235764939 - L1PBa LINE L1 -6316 547 7 2035 246 74 49 chr2 17491654 17492022 -235764561 + L1M4 LINE L1 3504 3861 -2285 1527 177 9 40 chr2 17492022 17492344 -235764239 + AluJo SINE Alu 1 312 0 2035 246 74 49 chr2 17492344 17492809 -235763774 + L1M4 LINE L1 3861 4358 -1788 725 313 18 3 chr2 17492982 17493308 -235763275 + L1ME3A LINE L1 2669 2999 -3147 22 0 0 0 chr2 17493567 17493589 -235762994 + AT_rich Low_complexity Low_complexity 1 22 0 885 269 60 85 chr2 17493683 17494749 -235761834 + L1ME3A LINE L1 4013 5051 -1095 297 0 0 0 chr2 17494925 17494958 -235761625 + (CA)n Simple_repeat Simple_repeat 2 34 0 242 308 8 8 chr2 17494958 17495075 -235761508 + L1ME3A LINE L1 5321 5437 -725 2832 177 4 2 chr2 17495080 17495582 -235761001 + L1PA8 LINE L1 1 503 -5372 25909 143 10 20 chr2 17495610 17501339 -235755244 + L1PA8 LINE L1 797 6476 -11 755 287 117 13 chr2 17501320 17501759 -235754824 + L1ME3A LINE L1 5416 5890 -280 * 284 281 22 22 chr2 17501784 17501873 -235754710 - MER45C DNA AcHobo -502 451 363 1090 266 86 0 chr2 17501932 17502188 -235754395 - MER45C DNA AcHobo -675 278 1 882 255 34 40 chr2 17502254 17502552 -235754031 + L1MC4 LINE L1 6810 7105 -937 269 247 0 12 chr2 17502620 17502701 -235753882 + L1MC5 LINE L1 7002 7081 -880 491 320 76 0 chr2 17502792 17503017 -235753566 + L1MC4 LINE L1 7189 7430 -612 352 266 83 18 chr2 17503001 17503219 -235753364 + L1MC5 LINE L1 7252 7483 -478 * 265 270 184 9 chr2 17503298 17503511 -235753072 + L1MC4 LINE L1 7648 8025 -17 2242 191 41 59 chr2 17505732 17505847 -235750736 - MER54A LTR ERVL 0 644 528 1402 40 0 60 chr2 17505847 17506047 -235750536 + L1PA6 LINE L1 5967 6154 0 2242 191 41 59 chr2 17506047 17506086 -235750497 - MER54A LTR ERVL -116 528 490 8250 75 2 4 chr2 17506086 17507159 -235749424 - MER11C LTR ERVK 0 1071 1 2242 191 41 59 chr2 17507159 17507868 -235748715 - MER54A LTR ERVL -154 490 1 1269 251 109 41 chr2 17507934 17508400 -235748183 + MLT1D LTR MaLR 8 505 0 398 261 27 60 chr2 17508486 17508670 -235747913 - MER5B DNA MER1_type 0 178 1 296 223 330 10 chr2 17508690 17508793 -235747790 + L2 LINE L2 3137 3272 0 1317 264 89 33 chr2 17508941 17509425 -235747158 - MLT1J LTR MaLR 0 511 1 190 300 0 0 chr2 17509524 17509574 -235747009 - L2 LINE L2 -259 3054 3005 192 253 103 46 chr2 17510312 17510399 -235746184 - MIR SINE MIR -7 255 164 233 331 84 28 chr2 17511166 17511308 -235745275 + L2 LINE L2 2905 3054 -218 289 278 83 30 chr2 17511716 17511849 -235744734 - L2 LINE L2 -171 3142 3003 186 332 82 46 chr2 17511938 17512134 -235744449 + L2 LINE L2 2891 3093 -179 21 36 0 0 chr2 17512387 17512415 -235744168 + AT_rich Low_complexity Low_complexity 1 28 0 21 71 0 0 chr2 17514160 17514202 -235742381 + AT_rich Low_complexity Low_complexity 1 42 0 5238 72 0 16 chr2 17514219 17514929 -235741654 - L1PA7 LINE L1 -1668 4478 3780 6734 74 1 0 chr2 17514933 17516606 -235739977 + L1PA7 LINE L1 4466 6143 -11 419 207 0 26 chr2 17516700 17516816 -235739767 - HAL1 LINE L1 -105 2402 2290 6439 175 65 12 chr2 17516918 17518487 -235738096 - L1M1 LINE L1 -4065 1263 2 2740 178 41 6 chr2 17518498 17519038 -235737545 - L1 LINE L1 -1957 4189 3631 23 33 0 0 chr2 17519044 17519074 -235737509 + AT_rich Low_complexity Low_complexity 1 30 0 296 274 71 0 chr2 17519079 17519192 -235737391 - HAL1 LINE L1 -865 1642 1522 523 290 44 1 chr2 17519327 17519484 -235737099 + MIR SINE MIR 8 172 -36 21 0 0 0 chr2 17520601 17520622 -235735961 + AT_rich Low_complexity Low_complexity 1 21 0 2458 222 83 32 chr2 17521066 17521814 -235734769 - L1MB7 LINE L1 -10 6174 5389 25 31 0 0 chr2 17521993 17522025 -235734558 + AT_rich Low_complexity Low_complexity 1 32 0 207 191 0 43 chr2 17522178 17522225 -235734358 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 328 356 44 7 chr2 17523818 17523953 -235732630 + MIR3 SINE MIR 9 148 -60 255 335 84 77 chr2 17523965 17524356 -235732227 - LTR16C LTR ERVL -12 479 86 1290 141 5 0 chr2 17524536 17524745 -235731838 + L1PB3 LINE L1 5954 6160 -345 977 111 6 22 chr2 17524745 17524925 -235731658 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 1290 141 5 0 chr2 17524925 17525087 -235731496 + L1PB3 LINE L1 6160 6505 0 361 260 39 78 chr2 17525177 17525260 -235731323 - MIR SINE MIR -87 175 99 890 216 72 29 chr2 17525260 17525468 -235731115 - MER20 DNA MER1_type -2 217 1 361 260 39 78 chr2 17525468 17525538 -235731045 - MIR SINE MIR -163 99 28 204 91 61 0 chr2 17525769 17525802 -235730781 + (TTTAA)n Simple_repeat Simple_repeat 1 35 0 406 303 80 86 chr2 17525811 17526148 -235730435 - L2 LINE L2 -2 3270 2936 281 344 23 31 chr2 17527247 17527375 -235729208 + MER5A DNA MER1_type 63 189 0 1500 288 98 14 chr2 17528528 17529388 -235727195 - L2 LINE L2 -5 3308 2377 685 270 90 17 chr2 17530634 17530706 -235725877 - MIR SINE MIR -7 255 190 1456 87 73 23 chr2 17530706 17530925 -235725658 - MER30 DNA MER1_type 0 230 1 685 270 90 17 chr2 17530925 17531085 -235725498 - MIR SINE MIR -72 190 6 1912 157 0 3 chr2 17531605 17531905 -235724678 + AluJo SINE Alu 13 311 -1 286 326 79 28 chr2 17532409 17532624 -235723959 - MIR SINE MIR -34 228 3 1694 172 48 43 chr2 17533735 17534107 -235722476 - THE1C LTR MaLR -1 374 1 401 305 92 62 chr2 17534900 17535205 -235721378 + HAL1 LINE L1 812 1125 -1382 12784 86 37 2 chr2 17535448 17537956 -235718627 - L1PA7 LINE L1 -3 6151 3437 338 298 14 20 chr2 17538159 17538321 -235718262 + L1M4c LINE L1 1549 1913 -830 465 277 31 13 chr2 17538321 17538480 -235718103 - MLT1K LTR MaLR -8 580 419 408 257 45 56 chr2 17539351 17539530 -235717053 - MER5B DNA MER1_type -1 177 1 6459 32 0 4 chr2 17540458 17541232 -235715351 - L1PA4 LINE L1 -3 6152 5382 4985 278 109 20 chr2 17541730 17543976 -235712607 + L2 LINE L2 299 2718 -596 925 252 47 50 chr2 17543975 17544293 -235712290 + L2 LINE L2 2991 3307 -6 * 39 68 0 0 chr2 17544337 17544411 -235712172 + AT_rich Low_complexity Low_complexity 1 74 0 286 369 40 0 chr2 17544450 17544599 -235711984 - MIR SINE MIR -2 260 106 21 0 0 0 chr2 17545340 17545361 -235711222 + AT_rich Low_complexity Low_complexity 1 21 0 1044 146 39 10 chr2 17545581 17545787 -235710796 - L1PA13 LINE L1 -2 6161 5950 385 271 80 97 chr2 17545897 17546116 -235710467 - HAL1 LINE L1 -385 2122 1901 2332 100 0 0 chr2 17546116 17546416 -235710167 + AluSx SINE Alu 5 304 -8 385 271 80 97 chr2 17546416 17546672 -235709911 - HAL1 LINE L1 -606 1901 1655 6204 158 43 12 chr2 17546698 17548474 -235708109 - L1MA8 LINE L1 -156 7554 5593 979 229 0 0 chr2 17548487 17548688 -235707895 - L1MA8 LINE L1 -4553 3012 2812 1126 124 6 0 chr2 17548790 17548959 -235707624 - L1P4 LINE L1 -382 5779 5610 23 0 0 0 chr2 17549428 17549451 -235707132 + AT_rich Low_complexity Low_complexity 1 23 0 288 155 0 107 chr2 17550118 17550202 -235706381 + L1MB4 LINE L1 6106 6180 0 201 306 0 0 chr2 17550526 17550575 -235706008 - MIR SINE MIR -24 238 190 2182 162 50 29 chr2 17552058 17552539 -235704044 + L1MC2 LINE L1 5852 6342 -2 576 288 131 4 chr2 17554251 17554480 -235702103 + MIR SINE MIR 2 259 -3 26 0 0 0 chr2 17555496 17555522 -235701061 + AT_rich Low_complexity Low_complexity 1 26 0 1960 281 139 8 chr2 17556168 17557092 -235699491 - L2 LINE L2 -10 3303 2256 467 284 86 25 chr2 17558697 17558859 -235697724 - MIR SINE MIR -16 246 75 385 283 33 8 chr2 17558879 17558999 -235697584 - L2 LINE L2 0 3313 3191 2100 91 7 11 chr2 17559362 17559680 -235696903 + AluSq SINE Alu 1 317 0 234 215 187 56 chr2 17559716 17559823 -235696760 + L2 LINE L2 3192 3312 -1 308 253 13 13 chr2 17559981 17560056 -235696527 + MIR3 SINE MIR 85 159 -49 356 237 254 34 chr2 17560631 17560808 -235695775 - MIR SINE MIR -10 252 37 23 33 0 0 chr2 17561466 17561496 -235695087 + AT_rich Low_complexity Low_complexity 1 30 0 2274 87 7 0 chr2 17562822 17563122 -235693461 - AluY SINE Alu -9 302 1 200 143 18 71 chr2 17563282 17563338 -235693245 + L2 LINE L2 2294 2346 -968 1992 110 0 33 chr2 17564065 17564366 -235692217 + AluSg SINE Alu 1 291 -19 259 202 11 43 chr2 17568127 17568221 -235688362 + (CCCCG)n Simple_repeat Simple_repeat 5 95 0 224 284 142 62 chr2 17570468 17570693 -235685890 + L2 LINE L2 3015 3257 -56 22 0 0 0 chr2 17571150 17571172 -235685411 + AT_rich Low_complexity Low_complexity 1 22 0 297 382 65 58 chr2 17571374 17571939 -235684644 + L2 LINE L2 2398 2966 -348 542 286 74 30 chr2 17572562 17572793 -235683790 + MIR SINE MIR 3 243 -19 794 206 32 92 chr2 17572834 17573052 -235683531 - MER63A DNA MER1_type -3 207 3 198 289 0 0 chr2 17573541 17573586 -235682997 - L2 LINE L2 -19 3253 3209 449 330 81 73 chr2 17573827 17574088 -235682495 - L2 LINE L2 -5 3267 3005 219 411 28 0 chr2 17574237 17574344 -235682239 + L2 LINE L2 3177 3286 -27 277 230 138 0 chr2 17576724 17576811 -235679772 + L1ME3A LINE L1 6046 6144 -26 295 256 11 33 chr2 17576823 17576913 -235679670 + GA-rich Low_complexity Low_complexity 2 89 0 1602 171 7 10 chr2 17578150 17578448 -235678135 + AluJb SINE Alu 6 302 -10 22 56 0 0 chr2 17578728 17578764 -235677819 + AT_rich Low_complexity Low_complexity 1 36 0 36 23 0 0 chr2 17578833 17578876 -235677707 + AT_rich Low_complexity Low_complexity 1 43 0 21 57 0 0 chr2 17578953 17578988 -235677595 + AT_rich Low_complexity Low_complexity 1 35 0 1175 157 5 20 chr2 17579995 17580199 -235676384 + AluJb SINE Alu 112 312 0 288 47 47 0 chr2 17581059 17581102 -235675481 + L1MC1 LINE L1 6288 6332 -1 420 276 20 20 chr2 17581482 17581595 -235674988 - MIR SINE MIR -59 149 37 208 200 57 29 chr2 17581675 17581745 -235674838 - L3b LINE CR1 -189 1394 1323 1302 229 35 10 chr2 17581750 17582060 -235674523 - MLT1C LTR MaLR -6 461 144 342 119 0 17 chr2 17582057 17582116 -235674467 + FLAM SINE Alu 75 132 -1 * 240 35 0 0 chr2 17582287 17582316 -235674267 + (TAGA)n Simple_repeat Simple_repeat 1 29 0 601 324 68 30 chr2 17582675 17583101 -235673482 + L2 LINE L2 2148 2589 -725 1366 188 0 4 chr2 17583239 17583473 -235673110 + AluJo SINE Alu 24 256 -56 184 318 0 16 chr2 17584644 17584707 -235671876 - MIR SINE MIR -49 213 152 215 383 45 31 chr2 17584712 17585045 -235671538 - L2 LINE L2 -221 3051 2709 319 368 64 42 chr2 17585078 17585437 -235671146 - L2 LINE L2 -703 2611 2245 216 0 0 0 chr2 17585522 17585546 -235671037 + (A)n Simple_repeat Simple_repeat 1 24 0 1880 138 0 24 chr2 17586634 17586930 -235669653 + AluJo SINE Alu 11 299 -13 21 0 0 0 chr2 17588569 17588590 -235667993 + GC_rich Low_complexity Low_complexity 1 21 0 238 322 113 26 chr2 17589122 17589237 -235667346 + L2 LINE L2 3185 3309 -4 23 0 0 0 chr2 17590430 17590453 -235666130 + AT_rich Low_complexity Low_complexity 1 23 0 351 232 11 32 chr2 17592402 17592497 -235664086 - MIR3 SINE MIR -3 205 113 321 305 0 0 chr2 17593399 17593481 -235663102 + CT-rich Low_complexity Low_complexity 1 82 0 21 36 0 0 chr2 17594902 17594930 -235661653 + AT_rich Low_complexity Low_complexity 1 28 0 268 307 217 12 chr2 17596754 17596920 -235659663 + MIR SINE MIR 59 258 -4 275 269 120 9 chr2 17597072 17597180 -235659403 - L2 LINE L2 -19 3294 3175 186 287 98 16 chr2 17598067 17598189 -235658394 + MIR SINE MIR 101 232 -30 193 115 19 39 chr2 17598955 17599007 -235657576 + (CATA)n Simple_repeat Simple_repeat 4 54 0 260 236 81 73 chr2 17599496 17599671 -235656912 + MIR SINE MIR 16 184 -64 180 0 0 0 chr2 17601483 17601503 -235655080 + (A)n Simple_repeat Simple_repeat 1 20 0 2548 43 0 10 chr2 17601506 17601811 -235654772 + AluY SINE Alu 3 304 -7 392 332 50 20 chr2 17601811 17602009 -235654574 - MIR SINE MIR -25 237 34 25 0 0 0 chr2 17602036 17602061 -235654522 + AT_rich Low_complexity Low_complexity 1 25 0 389 216 94 41 chr2 17602078 17602392 -235654191 - L1MC5 LINE L1 -71 7890 7528 233 294 106 50 chr2 17602464 17602624 -235653959 + MIR SINE MIR 84 252 -10 268 288 15 0 chr2 17602635 17602701 -235653882 + GA-rich Low_complexity Low_complexity 2 68 0 209 333 39 0 chr2 17603118 17603196 -235653387 + MIR3 SINE MIR 85 165 -43 467 340 86 5 chr2 17603212 17603409 -235653174 + MIR SINE MIR 2 214 -48 255 143 131 12 chr2 17604299 17604383 -235652200 - L1ME4a LINE L1 -4 6117 6024 404 302 115 21 chr2 17604452 17604687 -235651896 - L1ME4a LINE L1 -225 5896 5640 220 204 0 0 chr2 17605050 17605094 -235651489 + (CAT)n Simple_repeat Simple_repeat 2 45 0 261 411 40 0 chr2 17605434 17605558 -235651025 - L2 LINE L2 -2 3270 3142 253 399 21 0 chr2 17606077 17606220 -235650363 + MIR SINE MIR 117 262 0 201 344 41 25 chr2 17606275 17606397 -235650186 + L2 LINE L2 3189 3312 -1 512 235 132 29 chr2 17606637 17606847 -235649736 - MIR SINE MIR -10 252 14 469 241 157 31 chr2 17606913 17607104 -235649479 - L2 LINE L2 0 3313 3099 201 259 52 0 chr2 17607900 17607958 -235648625 + MIR SINE MIR 129 189 -73 431 277 72 39 chr2 17608074 17608253 -235648330 - MIR SINE MIR -57 205 18 222 150 0 0 chr2 17608271 17608311 -235648272 + (TTA)n Simple_repeat Simple_repeat 2 41 0 1445 211 143 46 chr2 17608456 17608910 -235647673 - MLT1J LTR MaLR -10 501 4 371 313 41 20 chr2 17609077 17609224 -235647359 + MIR3 SINE MIR 36 185 -23 27 29 0 0 chr2 17609785 17609819 -235646764 + AT_rich Low_complexity Low_complexity 1 34 0 553 317 31 21 chr2 17609918 17610262 -235646321 + L1M4 LINE L1 4696 5059 -1087 489 169 12 0 chr2 17610776 17610859 -235645724 - AluS SINE Alu -228 85 2 28 29 0 0 chr2 17611181 17611216 -235645367 + AT_rich Low_complexity Low_complexity 1 35 0 369 270 97 30 chr2 17611401 17611638 -235644945 + L1ME LINE L1 4733 4985 -1161 612 280 106 27 chr2 17611695 17612307 -235644276 + L1ME LINE L1 5131 5805 -357 2324 105 30 21 chr2 17612307 17612679 -235643904 - THE1C LTR MaLR 0 375 1 22 0 0 0 chr2 17613721 17613743 -235642840 + AT_rich Low_complexity Low_complexity 1 22 0 1342 80 0 0 chr2 17614685 17614847 -235641736 - AluSc SINE Alu -16 293 132 253 208 57 75 chr2 17615132 17615238 -235641345 + MIR SINE MIR 109 212 -50 22 70 0 0 chr2 17616188 17616231 -235640352 + AT_rich Low_complexity Low_complexity 1 43 0 506 356 85 36 chr2 17616740 17617375 -235639208 + L2 LINE L2 2594 3258 -14 537 315 36 24 chr2 17617752 17618096 -235638487 - L1 LINE L1 -1087 5059 4696 204 40 0 0 chr2 17618206 17618231 -235638352 + (TA)n Simple_repeat Simple_repeat 2 26 0 358 306 41 20 chr2 17618792 17618939 -235637644 - MIR3 SINE MIR -23 185 36 1445 211 143 46 chr2 17619106 17619560 -235637023 + MLT1J LTR MaLR 4 501 -10 222 150 0 0 chr2 17619705 17619745 -235636838 + (TAA)n Simple_repeat Simple_repeat 2 41 0 431 277 72 39 chr2 17619763 17619942 -235636641 + MIR SINE MIR 18 205 -57 201 259 52 0 chr2 17620058 17620116 -235636467 - MIR SINE MIR -73 189 129 469 241 157 31 chr2 17620912 17621103 -235635480 + L2 LINE L2 3099 3313 0 512 235 132 29 chr2 17621169 17621379 -235635204 + MIR SINE MIR 14 252 -10 201 344 41 25 chr2 17621619 17621741 -235634842 - L2 LINE L2 -1 3312 3189 259 399 21 0 chr2 17621796 17621939 -235634644 - MIR SINE MIR 0 262 117 261 411 40 0 chr2 17622458 17622582 -235634001 + L2 LINE L2 3142 3270 -2 220 204 0 0 chr2 17622922 17622966 -235633617 + (ATG)n Simple_repeat Simple_repeat 2 45 0 404 302 115 21 chr2 17623329 17623564 -235633019 + L1ME4a LINE L1 5640 5896 -225 501 279 134 0 chr2 17624715 17624887 -235631696 - MIR SINE MIR -24 238 44 321 295 25 25 chr2 17625109 17625231 -235631352 + L3 LINE CR1 1148 1269 -308 330 284 0 0 chr2 17625231 17625326 -235631257 + L1M4 LINE L1 4774 4868 -1278 1664 133 149 0 chr2 17625549 17625850 -235630733 + MER7A DNA MER2_type 3 346 0 21 0 0 0 chr2 17626314 17626335 -235630248 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 17626777 17626806 -235629777 + AT_rich Low_complexity Low_complexity 1 29 0 2494 71 0 3 chr2 17626940 17627249 -235629334 + AluSg SINE Alu 1 308 -2 235 276 124 48 chr2 17627288 17627393 -235629190 - MIR SINE MIR -76 132 20 916 125 8 0 chr2 17627647 17627775 -235628808 + AluJb SINE Alu 1 129 -183 212 98 0 49 chr2 17627776 17627817 -235628766 + (GAAAA)n Simple_repeat Simple_repeat 5 43 0 1161 128 0 0 chr2 17627836 17628000 -235628583 + AluJb SINE Alu 129 292 -20 357 349 31 26 chr2 17628828 17629023 -235627560 - MIR3 SINE MIR -7 201 6 262 343 102 19 chr2 17629328 17629544 -235627039 + L2 LINE L2 2628 2861 -453 233 301 125 7 chr2 17629698 17629834 -235626749 + L2 LINE L2 3161 3312 -1 233 342 40 0 chr2 17630074 17630150 -235626433 + MIR SINE MIR 36 114 -148 192 152 0 0 chr2 17630230 17630263 -235626320 + CT-rich Low_complexity Low_complexity 2 34 0 475 224 47 0 chr2 17630598 17630705 -235625878 + MER94 DNA DNA 7 118 -16 1015 263 79 67 chr2 17630719 17631198 -235625385 + L2 LINE L2 2825 3309 -4 22 0 0 0 chr2 17631700 17631722 -235624861 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr2 17631881 17631904 -235624679 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1058 202 0 20 chr2 17631905 17632103 -235624480 - AluJb SINE Alu -32 280 87 467 278 108 19 chr2 17632281 17632639 -235623944 - L1MEd LINE L1 -865 1625 1277 2140 132 3 0 chr2 17632644 17632954 -235623629 + AluSx SINE Alu 2 312 0 35 0 0 0 chr2 17632954 17632989 -235623594 + AT_rich Low_complexity Low_complexity 1 35 0 512 231 12 24 chr2 17633143 17633312 -235623271 - L1MEd LINE L1 -4991 1128 962 398 303 66 0 chr2 17634220 17634372 -235622211 - MIR SINE MIR -13 249 88 1742 130 70 0 chr2 17634382 17634652 -235621931 + AluSg1 SINE Alu 1 289 -20 1934 120 24 3 chr2 17635558 17635849 -235620734 - AluSx SINE Alu -15 297 1 737 266 211 27 chr2 17636458 17637019 -235619564 + L2 LINE L2 2381 3036 -277 1190 157 5 20 chr2 17637799 17638003 -235618580 + AluJb SINE Alu 112 312 0 2376 197 84 47 chr2 17639745 17640446 -235616137 + LTR8A LTR ERV1 1 727 0 235 304 51 29 chr2 17642084 17642189 -235614394 - MER5A DNA MER1_type -61 128 11 192 255 11 85 chr2 17642287 17642381 -235614202 - L2 LINE L2 0 3272 3186 225 0 0 0 chr2 17642405 17642430 -235614153 + (CAGTG)n Simple_repeat Simple_repeat 1 25 0 282 279 98 16 chr2 17642923 17643045 -235613538 + MIR3 SINE MIR 46 177 -31 227 195 187 0 chr2 17644430 17644533 -235612050 + MIR SINE MIR 114 246 -16 337 200 47 47 chr2 17644932 17645017 -235611566 - L1MA6 LINE L1 -13 6287 6203 425 280 118 65 chr2 17645139 17645673 -235610910 - MLT1L LTR MaLR -19 492 3 212 263 0 74 chr2 17646676 17646771 -235609812 - MIR3 SINE MIR -17 191 104 1947 154 3 3 chr2 17646798 17647090 -235609493 + AluSx SINE Alu 3 294 -18 231 214 0 0 chr2 17647446 17647488 -235609095 + (CA)n Simple_repeat Simple_repeat 1 42 0 2193 188 94 30 chr2 17647763 17648232 -235608351 - MLT1D LTR MaLR 0 505 7 445 255 71 42 chr2 17648285 17648497 -235608086 - MIR SINE MIR 0 262 45 327 344 8 16 chr2 17648744 17648872 -235607711 - MIR SINE MIR -116 146 20 287 254 14 0 chr2 17649382 17649453 -235607130 - L2 LINE L2 0 3313 3242 183 327 24 54 chr2 17649889 17650057 -235606526 - L2 LINE L2 -555 2759 2597 587 80 36 27 chr2 17650813 17650925 -235605658 + CT-rich Low_complexity Low_complexity 4 116 0 2057 148 0 3 chr2 17650927 17651232 -235605351 - AluSx SINE Alu -3 309 6 1484 181 36 53 chr2 17651239 17651542 -235605041 - AluJo SINE Alu -14 298 1 1978 97 60 0 chr2 17651845 17652228 -235604355 + AluSx SINE Alu 1 399 0 2271 183 45 0 chr2 17652248 17652652 -235603931 - MER61C LTR ERV1 0 434 13 2491 72 0 3 chr2 17653001 17653306 -235603277 + AluY SINE Alu 1 304 -7 243 290 38 2 chr2 17653852 17653959 -235602624 + MIR SINE MIR 33 143 -65 1740 209 39 70 chr2 17653969 17654482 -235602101 + MLT1D LTR MaLR 1 497 -8 2093 108 35 52 chr2 17654545 17654914 -235601669 + THE1B LTR MaLR 2 364 0 207 0 0 0 chr2 17655454 17655477 -235601106 + (T)n Simple_repeat Simple_repeat 1 23 0 1580 115 0 63 chr2 17655479 17655732 -235600851 - AluSx SINE Alu -75 237 1 2689 184 86 48 chr2 17656964 17657665 -235598918 - LTR8A LTR ERV1 0 727 1 24 32 0 0 chr2 17659929 17659960 -235596623 + AT_rich Low_complexity Low_complexity 1 31 0 227 277 45 54 chr2 17660581 17660693 -235595890 + MER5B DNA MER1_type 2 112 -66 540 289 40 73 chr2 17660912 17661466 -235595117 - MLT1F1 LTR MaLR -35 520 1 237 279 0 15 chr2 17661753 17661821 -235594762 + (TA)n Simple_repeat Simple_repeat 2 68 0 2321 100 3 13 chr2 17661979 17662289 -235594294 - AluSq SINE Alu -6 307 1 247 250 143 0 chr2 17662526 17662610 -235593973 + MIR SINE MIR 96 191 -71 2493 71 0 0 chr2 17663305 17663601 -235592982 - AluSg SINE Alu -14 296 1 25 51 0 0 chr2 17663696 17663735 -235592848 + AT_rich Low_complexity Low_complexity 1 39 0 24 53 0 0 chr2 17664428 17664466 -235592117 + AT_rich Low_complexity Low_complexity 1 38 0 380 211 154 77 chr2 17664694 17664850 -235591733 - MER5A DNA MER1_type -12 177 10 423 231 110 0 chr2 17664987 17665078 -235591505 + Charlie1 DNA MER1_type 11 111 -2650 825 80 0 9 chr2 17665178 17665290 -235591293 + L1MA4A LINE L1 5863 5973 -330 1230 126 69 0 chr2 17665290 17665465 -235591118 + AluJo SINE Alu 87 273 -39 1998 97 28 53 chr2 17665473 17665833 -235590750 + L1MA4A LINE L1 5953 6303 0 445 302 99 36 chr2 17665874 17666380 -235590203 + L1ME LINE L1 5262 5799 -322 261 207 135 0 chr2 17666418 17666498 -235590085 + MIR SINE MIR 83 176 -86 216 333 42 10 chr2 17669031 17669127 -235587456 + MIR SINE MIR 79 177 -85 5996 102 6 15 chr2 17670054 17670942 -235585641 - L1PB3 LINE L1 0 6154 5275 212 338 0 0 chr2 17670998 17671078 -235585505 - MIR SINE MIR -120 142 63 1811 166 54 0 chr2 17671985 17672281 -235584302 - AluSx SINE Alu 0 312 1 272 253 11 42 chr2 17672482 17672577 -235584006 - MIR SINE MIR -98 110 19 246 221 62 5 chr2 17673169 17673299 -235583284 - MER91 DNA MER1_type -4 192 1 269 278 43 40 chr2 17673398 17673547 -235583036 + MIR SINE MIR 21 172 -66 2327 100 3 0 chr2 17673626 17673925 -235582658 + AluSc SINE Alu 1 300 -9 795 226 6 11 chr2 17674094 17674271 -235582312 + MER97a DNA MER1_type? 2 177 -717 235 322 16 0 chr2 17674372 17674457 -235582126 + MIR SINE MIR 60 146 -62 21 0 0 0 chr2 17674480 17674501 -235582082 + AT_rich Low_complexity Low_complexity 1 21 0 182 304 0 0 chr2 17675232 17675288 -235581295 + L2 LINE L2 3009 3064 -208 229 333 67 0 chr2 17675508 17675628 -235580955 - L2 LINE L2 -20 3293 3166 226 167 0 0 chr2 17675672 17675708 -235580875 + MER91 DNA MER1_type 105 140 0 1733 138 4 54 chr2 17675942 17676240 -235580343 - AluJb SINE Alu 0 305 22 408 40 0 0 chr2 17676654 17676704 -235579879 + (TGGA)n Simple_repeat Simple_repeat 3 52 0 1777 187 81 35 chr2 17676707 17677103 -235579480 - MLT2B1 LTR ERVL -105 415 2 652 215 130 35 chr2 17677128 17677328 -235579255 - MIR SINE MIR -32 230 12 195 139 0 0 chr2 17677641 17677677 -235578906 + (TG)n Simple_repeat Simple_repeat 2 37 0 1896 153 0 52 chr2 17677910 17678237 -235578346 - AluJb SINE Alu -2 310 1 331 274 16 48 chr2 17678240 17678364 -235578219 - MIR SINE MIR -114 148 29 374 250 62 44 chr2 17678694 17678854 -235577729 - MIR SINE MIR -21 241 79 2118 128 3 3 chr2 17679172 17679476 -235577107 + AluSx SINE Alu 1 304 -8 605 298 110 21 chr2 17681161 17681667 -235574916 + L1ME4a LINE L1 5269 5843 -278 490 344 0 7 chr2 17681843 17681997 -235574586 + MIR SINE MIR 35 187 -75 209 267 0 0 chr2 17682246 17682291 -235574292 + GA-rich Low_complexity Low_complexity 3 47 0 2239 99 0 0 chr2 17682699 17682991 -235573592 + AluSg1 SINE Alu 2 293 -16 193 281 0 18 chr2 17682994 17683051 -235573532 - MER5A DNA MER1_type -58 131 76 4241 117 19 56 chr2 17683055 17683772 -235572811 - LTR8 LTR ERV1 0 691 1 236 282 34 60 chr2 17684429 17684546 -235572037 - MIR SINE MIR -82 180 67 231 114 0 0 chr2 17685144 17685179 -235571404 + (TCCCC)n Simple_repeat Simple_repeat 2 36 0 326 273 10 0 chr2 17685841 17685940 -235570643 - MIR SINE MIR -87 175 76 2242 116 0 3 chr2 17686805 17687107 -235569476 - AluSx SINE Alu -9 303 3 604 220 35 14 chr2 17687279 17687420 -235569163 + MER33 DNA MER1_type 1 144 -180 727 138 59 69 chr2 17687479 17687649 -235568934 + MER33 DNA MER1_type 163 332 -2292 4970 26 0 11 chr2 17687649 17688223 -235568360 - L1PA5 LINE L1 -2 6152 5585 727 138 59 69 chr2 17688223 17688255 -235568328 + MER33 DNA MER1_type 332 363 0 189 381 0 0 chr2 17688346 17688409 -235568174 - L2 LINE L2 -202 3070 3008 219 114 0 0 chr2 17689033 17689068 -235567515 + (A)n Simple_repeat Simple_repeat 1 35 0 261 253 32 21 chr2 17689330 17689425 -235567158 + MER5A DNA MER1_type 89 184 -5 212 233 82 0 chr2 17689659 17689732 -235566851 - L2 LINE L2 -55 3258 3180 268 217 14 14 chr2 17691161 17691230 -235565353 + MIR SINE MIR 128 196 -66 329 330 41 4 chr2 17691744 17691922 -235564661 + MIR SINE MIR 5 186 -62 524 294 147 27 chr2 17693510 17694163 -235562420 - L2 LINE L2 0 3313 2580 216 77 0 26 chr2 17694513 17694552 -235562031 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2372 63 0 3 chr2 17694552 17694838 -235561745 - AluSp SINE Alu -1 323 1 516 248 113 50 chr2 17695073 17695230 -235561353 + MIR SINE MIR 6 183 -79 2313 101 0 0 chr2 17695230 17695527 -235561056 - AluSx SINE Alu -15 297 1 516 248 113 50 chr2 17695527 17695601 -235560982 + MIR SINE MIR 183 251 -11 416 333 106 40 chr2 17697100 17697118 -235559465 - L2 LINE L2 -3 3269 3254 2064 123 31 0 chr2 17697118 17697410 -235559173 - AluSq SINE Alu -12 301 1 416 333 106 40 chr2 17697410 17697664 -235558919 - L2 LINE L2 -18 3254 2979 221 224 20 0 chr2 17697782 17697831 -235558752 + L2 LINE L2 3223 3272 0 378 242 111 0 chr2 17698217 17698316 -235558267 - L2 LINE L2 -38 3275 3166 216 235 59 0 chr2 17698356 17698407 -235558176 - L2 LINE L2 -266 3047 2994 354 253 36 0 chr2 17698435 17698518 -235558065 + MIR SINE MIR 37 122 -86 271 159 0 0 chr2 17698919 17698963 -235557620 + L2 LINE L2 3193 3236 -36 1867 114 29 39 chr2 17699140 17699448 -235557135 - AluSx SINE Alu -7 305 1 2152 152 3 0 chr2 17699839 17700175 -235556408 - MER1B DNA MER1_type 0 337 1 3040 181 74 15 chr2 17700500 17701680 -235554903 - L1M4 LINE L1 -442 5978 4731 507 220 64 58 chr2 17701682 17701702 -235554881 - L1M4 LINE L1 -1806 4576 4558 1894 162 10 7 chr2 17701702 17702011 -235554572 + AluSx SINE Alu 1 310 -2 507 220 64 58 chr2 17702011 17702163 -235554420 - L1M4 LINE L1 -1824 4558 4403 2146 92 6 64 chr2 17705141 17705455 -235551128 + AluSq SINE Alu 1 296 -17 2093 116 3 7 chr2 17705838 17706130 -235550453 + AluSx SINE Alu 1 291 -21 21 0 0 0 chr2 17706388 17706409 -235550174 + AT_rich Low_complexity Low_complexity 1 21 0 307 283 0 22 chr2 17706613 17706705 -235549878 - L1MC4 LINE L1 -1339 6703 6614 315 316 0 0 chr2 17706711 17706844 -235549739 + (TATATG)n Simple_repeat Simple_repeat 3 135 0 234 286 0 10 chr2 17706845 17706943 -235549640 + L1MC4 LINE L1 6614 6710 -1332 277 291 91 2 chr2 17707215 17707521 -235549062 - L1M4 LINE L1 -3679 2703 2365 25 65 0 0 chr2 17707738 17707784 -235548799 + AT_rich Low_complexity Low_complexity 1 46 0 1641 168 32 7 chr2 17707930 17708215 -235548368 - AluSx SINE Alu -20 292 1 228 270 54 18 chr2 17708306 17708417 -235548166 - HAL1 LINE L1 -918 1589 1475 1660 226 153 38 chr2 17708431 17708919 -235547664 - L1MC5 LINE L1 -2 8040 7442 1624 156 85 14 chr2 17708919 17709202 -235547381 - AluSx SINE Alu -5 307 5 1660 226 153 38 chr2 17709202 17709477 -235547106 - L1MC5 LINE L1 -600 7442 7200 21 36 0 0 chr2 17710008 17710036 -235546547 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 17710790 17710812 -235545771 + AT_rich Low_complexity Low_complexity 1 22 0 457 277 186 0 chr2 17710944 17711164 -235545419 + MIR SINE MIR 2 262 0 335 299 193 25 chr2 17711237 17711434 -235545149 - MIR SINE MIR -13 249 20 239 278 165 30 chr2 17712012 17712145 -235544438 - L3 LINE CR1 -31 1546 1396 197 250 77 0 chr2 17712527 17712579 -235544004 + L2 LINE L2 3254 3309 -4 27 49 0 0 chr2 17713111 17713152 -235543431 + AT_rich Low_complexity Low_complexity 1 41 0 230 121 0 0 chr2 17713580 17713613 -235542970 - L2 LINE L2 -9 3263 3231 219 69 0 0 chr2 17714133 17714162 -235542421 + (TA)n Simple_repeat Simple_repeat 1 29 0 22 0 0 0 chr2 17714288 17714310 -235542273 + AT_rich Low_complexity Low_complexity 1 22 0 27 49 0 0 chr2 17714785 17714826 -235541757 + AT_rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr2 17715243 17715265 -235541318 + AT_rich Low_complexity Low_complexity 1 22 0 950 128 23 0 chr2 17715682 17715815 -235540768 + AluJ SINE Alu 1 136 -176 29 60 0 0 chr2 17715815 17715865 -235540718 + AT_rich Low_complexity Low_complexity 1 50 0 1037 183 0 0 chr2 17715876 17716040 -235540543 + AluJ SINE Alu 137 300 -12 23 33 0 0 chr2 17716081 17716111 -235540472 + AT_rich Low_complexity Low_complexity 1 30 0 349 308 101 6 chr2 17716342 17716501 -235540082 + L1MC4a LINE L1 5732 5905 -1903 2154 130 0 7 chr2 17718590 17718889 -235537694 + AluSx SINE Alu 1 297 -15 22 0 0 0 chr2 17719093 17719115 -235537468 + AT_rich Low_complexity Low_complexity 1 22 0 353 286 26 7 chr2 17719556 17719710 -235536873 - L1ME LINE L1 -349 5772 5616 269 280 90 20 chr2 17719845 17719945 -235536638 - MIR SINE MIR 0 262 156 421 191 99 75 chr2 17720296 17720548 -235536035 + L1MC5 LINE L1 7603 7860 -101 448 305 210 42 chr2 17721944 17722535 -235534048 + L1ME4a LINE L1 5254 5943 -178 2363 75 0 25 chr2 17722553 17722872 -235533711 + AluY SINE Alu 1 311 0 23 78 0 0 chr2 17722941 17722992 -235533591 + AT_rich Low_complexity Low_complexity 1 51 0 313 328 79 23 chr2 17723165 17723342 -235533241 - MIR SINE MIR -44 218 32 1973 137 14 3 chr2 17723818 17724111 -235532472 - AluJb SINE Alu -16 296 1 2284 97 0 7 chr2 17724122 17724420 -235532163 - AluSg SINE Alu -14 296 1 649 340 98 3 chr2 17724420 17724717 -235531866 - L2 LINE L2 -561 2753 2429 281 266 138 0 chr2 17724718 17724812 -235531771 - L2 LINE L2 -996 2318 2212 1068 148 0 0 chr2 17726190 17726352 -235530231 - AluSg/x SINE Alu -14 298 137 341 294 92 5 chr2 17726799 17726983 -235529600 + L1MC/D LINE L1 5591 5790 -2018 811 129 14 43 chr2 17728334 17728474 -235528109 + AluSq/x SINE Alu 1 136 -176 258 308 33 22 chr2 17728827 17728918 -235527665 + MIR SINE MIR 23 114 -148 21 36 0 0 chr2 17729528 17729556 -235527027 + AT_rich Low_complexity Low_complexity 1 28 0 341 345 111 34 chr2 17729598 17729833 -235526750 - L2 LINE L2 -10 3262 3010 24 0 0 0 chr2 17730922 17730946 -235525637 + GC_rich Low_complexity Low_complexity 1 24 0 229 188 0 0 chr2 17732343 17732391 -235524192 + Charlie7 DNA MER1_type 58 105 -2507 216 329 13 13 chr2 17732534 17732610 -235523973 + MIR SINE MIR 79 154 -108 1282 121 113 38 chr2 17732614 17732879 -235523704 - MER2 DNA MER2_type -14 331 47 501 279 134 0 chr2 17733752 17733924 -235522659 + MIR SINE MIR 44 238 -24 2544 58 0 6 chr2 17734968 17735280 -235521303 - AluY SINE Alu -1 310 1 339 278 10 10 chr2 17735450 17735547 -235521036 - MIR SINE MIR -67 141 45 212 254 34 0 chr2 17735890 17735949 -235520634 + MIR SINE MIR 99 159 -103 338 289 10 10 chr2 17736387 17736484 -235520099 + MIR SINE MIR 45 141 -67 237 235 134 8 chr2 17736729 17736848 -235519735 - L1ME4a LINE L1 -3 6118 5985 351 239 31 63 chr2 17737256 17737476 -235519107 - L1ME4a LINE L1 -298 5823 5637 857 305 81 44 chr2 17738063 17738677 -235517906 - L2 LINE L2 -410 2904 2268 539 335 53 8 chr2 17739812 17740057 -235516526 - MIR SINE MIR 0 262 7 301 287 78 35 chr2 17740710 17740825 -235515758 + MIR3 SINE MIR 73 192 -16 383 297 28 41 chr2 17741501 17741646 -235514937 + MIR3 SINE MIR 50 192 -16 2406 100 0 10 chr2 17741664 17741975 -235514608 - AluSq SINE Alu -5 308 1 182 336 33 33 chr2 17742611 17742733 -235513850 - L2 LINE L2 -220 3052 2931 441 0 0 0 chr2 17743168 17743217 -235513366 + (CA)n Simple_repeat Simple_repeat 2 50 0 251 275 27 101 chr2 17743394 17743543 -235513040 - L2 LINE L2 -636 2678 2541 * 363 300 12 0 chr2 17743515 17743650 -235512933 + MIR SINE MIR 34 169 -67 531 250 22 7 chr2 17744125 17744261 -235512322 - MIR3 SINE MIR -9 199 62 212 345 177 0 chr2 17744434 17744547 -235512036 - L2 LINE L2 -1 3271 3139 455 320 156 44 chr2 17744708 17745342 -235511241 - L2 LINE L2 0 3272 2567 311 337 0 20 chr2 17745819 17745917 -235510666 + MIR SINE MIR 28 123 -139 209 122 0 24 chr2 17746803 17746844 -235509739 + (TTA)n Simple_repeat Simple_repeat 3 42 0 283 328 34 8 chr2 17746954 17747073 -235509510 - MIR SINE MIR -82 180 59 267 152 0 0 chr2 17748445 17748491 -235508092 + T-rich Low_complexity Low_complexity 1 46 0 710 243 116 36 chr2 17748934 17749185 -235507398 + L1ME3A LINE L1 5568 5838 -332 241 262 71 63 chr2 17750719 17750845 -235505738 - MIR3 SINE MIR -81 127 1 234 282 0 14 chr2 17750863 17750934 -235505649 + L2 LINE L2 2659 2728 -586 243 242 16 0 chr2 17751001 17751063 -235505520 + L2 LINE L2 3207 3269 -3 187 178 0 67 chr2 17751133 17751178 -235505405 - L2 LINE L2 -90 3182 3141 1480 139 28 12 chr2 17751382 17751634 -235504949 + MLT1B LTR MaLR 1 256 -134 285 277 10 30 chr2 17751722 17751823 -235504760 - L1ME LINE L1 -333 5837 5739 717 140 18 0 chr2 17751823 17751937 -235504646 + MLT1B LTR MaLR 275 390 0 192 333 53 0 chr2 17752594 17752669 -235503914 + MIR SINE MIR 74 152 -110 225 297 44 11 chr2 17754112 17754203 -235502380 + MIR3 SINE MIR 64 157 -51 420 344 44 27 chr2 17754208 17754391 -235502192 - MER5A DNA MER1_type -2 187 2 295 320 64 84 chr2 17754857 17755107 -235501476 - L2 LINE L2 -24 3248 3004 211 274 14 27 chr2 17755387 17755460 -235501123 + CT-rich Low_complexity Low_complexity 1 72 0 194 318 123 45 chr2 17755518 17755672 -235500911 - MIR3 SINE MIR -28 180 15 301 185 10 205 chr2 17755944 17756086 -235500497 + MIR SINE MIR 38 151 -100 276 213 13 80 chr2 17756981 17757056 -235499527 - MIR3 SINE MIR -23 185 116 2020 141 0 0 chr2 17757165 17757462 -235499121 + AluSx SINE Alu 1 297 -15 2152 118 0 3 chr2 17757464 17757777 -235498806 + AluSx SINE Alu 1 312 0 1945 127 11 0 chr2 17758272 17758608 -235497975 + AluSx SINE Alu 1 339 0 2018 161 46 3 chr2 17758982 17759331 -235497252 - MLT1A1 LTR MaLR -1 364 1 240 326 15 44 chr2 17760789 17760925 -235495658 + MIR SINE MIR 13 143 -65 1078 197 97 13 chr2 17761727 17761955 -235494628 - MIR SINE MIR 0 262 16 407 293 29 29 chr2 17762102 17762276 -235494307 + MIR SINE MIR 9 182 -80 640 255 223 18 chr2 17762642 17762979 -235493604 + MLT1L LTR MaLR 208 613 -2 219 298 25 50 chr2 17763028 17763149 -235493434 + MIR SINE MIR 74 191 -71 297 291 0 13 chr2 17763308 17763387 -235493196 + MIR3 SINE MIR 117 194 -14 246 137 78 39 chr2 17763476 17763527 -235493056 + L2 LINE L2 3160 3212 -60 201 147 0 0 chr2 17764792 17764826 -235491757 + (CATA)n Simple_repeat Simple_repeat 3 36 0 609 271 67 2 chr2 17765107 17765294 -235491289 - MLT1J LTR MaLR -281 169 5 312 373 121 20 chr2 17766020 17766326 -235490257 - L2 LINE L2 0 3272 2936 784 301 13 4 chr2 17766909 17767154 -235489429 - MIR SINE MIR 0 262 18 294 238 131 0 chr2 17767133 17767217 -235489366 + MIR SINE MIR 59 153 -109 * 2288 183 4 73 chr2 17768025 17768594 -235487989 - LTR27 LTR ERV1 -139 497 2 355 308 8 15 chr2 17768726 17768859 -235487724 + L1ME4a LINE L1 4491 4622 -1524 2257 107 0 0 chr2 17769094 17769402 -235487181 - AluSg SINE Alu -2 308 1 335 297 97 16 chr2 17769470 17769655 -235486928 + L1ME4a LINE L1 4970 5169 -977 296 260 53 53 chr2 17769985 17770135 -235486448 + L1ME4a LINE L1 5764 5913 -208 207 0 0 0 chr2 17770200 17770223 -235486360 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1630 133 68 0 chr2 17770227 17770491 -235486092 - AluSx SINE Alu -30 282 1 261 244 174 0 chr2 17770492 17770578 -235486005 + L2 LINE L2 3212 3312 -1 2135 106 6 13 chr2 17770609 17770921 -235485662 - AluSg SINE Alu 0 310 1 1699 148 0 80 chr2 17771196 17771310 -235485273 + AluSx SINE Alu 3 125 -187 2457 103 59 0 chr2 17771310 17771650 -235484933 - THE1B LTR MaLR -4 360 1 1699 148 0 80 chr2 17771650 17771859 -235484724 + AluSx SINE Alu 125 300 -12 206 289 0 0 chr2 17771915 17771960 -235484623 - L2 LINE L2 -6 3307 3263 246 286 54 54 chr2 17772163 17772331 -235484252 - L2 LINE L2 -207 3065 2898 906 178 14 0 chr2 17772547 17772693 -235483890 + MER45A DNA AcHobo 31 178 0 237 211 0 0 chr2 17773268 17773320 -235483263 + (CA)n Simple_repeat Simple_repeat 2 53 0 466 228 167 31 chr2 17773867 17774029 -235482554 + MIR SINE MIR 23 206 -56 182 211 14 113 chr2 17774325 17774396 -235482187 - MER5B DNA MER1_type -78 100 37 1051 185 48 81 chr2 17774810 17775145 -235481438 + MER33 DNA MER1_type 1 324 0 367 271 16 49 chr2 17775218 17775340 -235481243 - MIR3 SINE MIR -2 206 89 205 264 97 0 chr2 17775968 17776040 -235480543 + MER5A DNA MER1_type 28 106 -83 226 190 203 51 chr2 17776087 17776166 -235480417 + L2 LINE L2 3166 3256 -16 900 252 48 0 chr2 17776477 17776687 -235479896 + MIR SINE MIR 38 257 -5 346 306 69 7 chr2 17776732 17776876 -235479707 - MIR3 SINE MIR -6 202 50 186 293 85 37 chr2 17777753 17777835 -235478748 + L2 LINE L2 3181 3266 -6 241 280 0 127 chr2 17778264 17778289 -235478294 - MIR SINE MIR -118 144 117 2122 120 0 13 chr2 17778289 17778605 -235477978 + AluSx SINE Alu 1 312 0 241 280 0 127 chr2 17778605 17778729 -235477854 - MIR SINE MIR -145 117 14 1719 78 47 0 chr2 17779019 17779276 -235477307 - L1MA5 LINE L1 0 6300 6032 241 293 6 52 chr2 17780005 17780179 -235476404 + (CAGAGA)n Simple_repeat Simple_repeat 3 168 0 299 365 16 24 chr2 17780306 17780432 -235476151 - MIR3 SINE MIR 0 208 84 2343 77 0 0 chr2 17780632 17780930 -235475653 - AluY SINE Alu -13 298 1 508 275 23 15 chr2 17781847 17781978 -235474605 - L2 LINE L2 0 3272 3141 211 294 71 12 chr2 17782891 17782976 -235473607 + MIR SINE MIR 20 109 -153 324 218 92 11 chr2 17784432 17784519 -235472064 + L2 LINE L2 3179 3272 0 367 301 74 49 chr2 17784740 17784903 -235471680 + MIR SINE MIR 38 204 -58 180 200 0 0 chr2 17784904 17784944 -235471639 + (CATATA)n Simple_repeat Simple_repeat 6 45 0 420 143 24 12 chr2 17786352 17786436 -235470147 + MLT1G1 LTR MaLR 511 595 0 329 337 117 17 chr2 17788392 17788802 -235467781 + L2 LINE L2 2841 3291 -22 334 330 85 5 chr2 17788836 17789024 -235467559 - MLT1K LTR MaLR -346 242 40 1881 218 185 2 chr2 17789517 17790036 -235466547 - MER90 LTR ERV1 0 614 1 572 280 35 43 chr2 17790089 17790435 -235466148 - L1MEc LINE L1 -5515 881 539 1088 296 30 26 chr2 17790463 17790922 -235465661 - L2 LINE L2 -1100 2214 1754 373 278 53 27 chr2 17791091 17791381 -235465202 - L1MEc LINE L1 -5986 410 100 1521 204 110 37 chr2 17792039 17792528 -235464055 - L1MB7 LINE L1 0 6184 5660 214 364 16 16 chr2 17792829 17792950 -235463633 + L2 LINE L2 2343 2463 -851 29 60 0 0 chr2 17793067 17793117 -235463466 + GC_rich Low_complexity Low_complexity 1 50 0 1516 213 111 35 chr2 17793830 17794318 -235462265 - L1MB7 LINE L1 0 6184 5660 293 333 15 15 chr2 17794619 17794751 -235461832 + L2 LINE L2 2343 2474 -840 365 305 102 0 chr2 17794977 17795095 -235461488 - L2 LINE L2 -5 3308 3179 414 0 0 0 chr2 17795569 17795615 -235460968 + (CA)n Simple_repeat Simple_repeat 1 46 0 21 0 0 0 chr2 17796312 17796333 -235460250 + AT_rich Low_complexity Low_complexity 1 21 0 721 206 120 11 chr2 17796831 17797015 -235459568 + MER3 DNA MER1_type 1 204 -5 224 263 32 53 chr2 17797425 17797520 -235459063 - L2 LINE L2 0 3313 3221 729 217 46 57 chr2 17798234 17798736 -235457847 - MLT1G LTR MaLR -4 538 1 330 266 69 113 chr2 17798755 17799090 -235457493 - MLT1G-int LTR MaLR -24 1347 1028 300 363 14 7 chr2 17799662 17799808 -235456775 - MLT1G-int LTR MaLR -832 539 393 575 278 115 44 chr2 17799999 17800529 -235456054 - MLT1G LTR MaLR -4 551 1 1785 152 28 3 chr2 17800863 17801153 -235455430 - AluSx SINE Alu -15 297 1 556 165 41 72 chr2 17801275 17801469 -235455114 + Charlie1 DNA MER1_type 55 242 -2519 2288 113 7 0 chr2 17801473 17801783 -235454800 + AluSx SINE Alu 1 312 0 384 174 284 9 chr2 17801783 17801887 -235454696 + Charlie1 DNA MER1_type 2627 2760 -1 752 229 63 23 chr2 17801957 17802170 -235454413 - L1MDa LINE L1 -5764 776 420 461 219 24 65 chr2 17802179 17802302 -235454281 - L1MDa LINE L1 -6014 526 409 852 200 0 7 chr2 17802999 17803144 -235453439 - MLT1D LTR MaLR -50 455 312 2764 257 38 76 chr2 17803613 17804183 -235452400 + L1M4 LINE L1 3180 3770 -2376 383 204 39 29 chr2 17804183 17804286 -235452297 + MER2 DNA MER2_type 2 105 -240 2764 257 38 76 chr2 17804286 17804965 -235451618 + L1M4 LINE L1 3770 4399 -1747 5634 138 37 8 chr2 17804965 17805859 -235450724 + L1MC1 LINE L1 5414 6333 0 2764 257 38 76 chr2 17805859 17806124 -235450459 + L1M4 LINE L1 4399 4673 -1473 2140 147 125 2 chr2 17806124 17806547 -235450036 + L1MD1 LINE L1 5768 6242 0 210 333 69 40 chr2 17806758 17806932 -235449651 - MIR SINE MIR -21 241 63 1082 157 15 35 chr2 17807130 17807327 -235449256 + MER20 DNA MER1_type 24 216 -3 2231 104 16 3 chr2 17808396 17808704 -235447879 - AluSx SINE Alu 0 312 1 658 75 9 9 chr2 17809347 17809454 -235447129 + (TG)n Simple_repeat Simple_repeat 2 108 0 534 135 10 52 chr2 17809459 17809555 -235447028 - FRAM SINE Alu -30 146 55 2219 93 6 16 chr2 17809769 17810081 -235446502 - AluY SINE Alu -2 309 1 279 54 0 0 chr2 17810704 17810741 -235445842 + (TA)n Simple_repeat Simple_repeat 2 38 0 243 0 0 0 chr2 17810741 17810768 -235445815 + (TG)n Simple_repeat Simple_repeat 1 27 0 1841 161 4 0 chr2 17810768 17811048 -235445535 - AluSx SINE Alu -31 281 1 1530 202 17 0 chr2 17811630 17811917 -235444666 + AluJo SINE Alu 1 292 -20 226 348 11 0 chr2 17812577 17812666 -235443917 + (TG)n Simple_repeat Simple_repeat 2 91 0 311 129 0 16 chr2 17813050 17813112 -235443471 - L1MA4A LINE L1 -295 6008 5948 287 327 103 6 chr2 17813345 17813501 -235443082 - MIR SINE MIR -24 238 68 240 275 79 87 chr2 17814873 17814933 -235441650 - L2 LINE L2 -411 2903 2844 4867 26 0 0 chr2 17814933 17815462 -235441121 + L1PA5 LINE L1 5626 6154 0 324 0 0 0 chr2 17815462 17815498 -235441085 + (TA)n Simple_repeat Simple_repeat 2 37 0 240 275 79 87 chr2 17815498 17815792 -235440791 - L2 LINE L2 -468 2846 2551 22 0 0 0 chr2 17816159 17816181 -235440402 + AT_rich Low_complexity Low_complexity 1 22 0 1750 216 43 54 chr2 17816591 17817053 -235439530 - MLT2C2 LTR ERVL -7 457 1 263 140 0 0 chr2 17817189 17817239 -235439344 + Alu SINE Alu 251 300 0 718 122 8 8 chr2 17817861 17817992 -235438591 + (TCCA)n Simple_repeat Simple_repeat 1 131 0 23 0 0 0 chr2 17818270 17818293 -235438290 + AT_rich Low_complexity Low_complexity 1 23 0 6156 125 10 28 chr2 17818313 17818678 -235437905 - L1PB1 LINE L1 0 6867 6497 471 60 0 0 chr2 17818678 17818745 -235437838 + (TCTA)n Simple_repeat Simple_repeat 3 69 0 6156 125 10 28 chr2 17818745 17819661 -235436922 - L1PB1 LINE L1 -370 6497 5614 648 38 0 0 chr2 17819661 17819741 -235436842 + L1PA5 LINE L1 5990 6069 -85 960 274 150 32 chr2 17819996 17820649 -235435934 - L1MEd LINE L1 -4894 1225 496 204 269 45 0 chr2 17821340 17821407 -235435176 - MIR SINE MIR -71 191 122 331 241 65 9 chr2 17822767 17822875 -235433708 + MIR SINE MIR 69 182 -80 2505 87 67 17 chr2 17823474 17823831 -235432752 + THE1C LTR MaLR 1 375 0 1644 230 8 37 chr2 17823986 17824360 -235432223 - MLT1A1 LTR MaLR 0 365 3 1731 174 0 17 chr2 17824631 17824929 -235431654 + AluJo SINE Alu 2 294 -18 1391 170 134 48 chr2 17825206 17825542 -235431041 + MLT1A1 LTR MaLR 1 365 0 1929 145 20 7 chr2 17825752 17826049 -235430534 + AluSx SINE Alu 4 304 -8 828 122 17 0 chr2 17826991 17827106 -235429477 + AluJ SINE Alu 14 130 -182 2078 132 0 0 chr2 17827116 17827397 -235429186 + AluJb SINE Alu 1 281 -31 225 0 0 0 chr2 17827648 17827673 -235428910 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1011 150 22 33 chr2 17828057 17828209 -235428374 + AluJ SINE Alu 123 274 -38 2802 104 0 29 chr2 17828209 17828251 -235428332 - THE1B LTR MaLR 0 364 322 2444 73 0 3 chr2 17828251 17828552 -235428031 + AluY SINE Alu 1 300 -11 2802 104 0 29 chr2 17828552 17828884 -235427699 - THE1B LTR MaLR -42 322 1 1011 150 22 33 chr2 17828884 17828911 -235427672 + AluJ SINE Alu 274 300 -12 396 0 0 0 chr2 17829141 17829185 -235427398 + (TA)n Simple_repeat Simple_repeat 1 44 0 13627 191 81 7 chr2 17829187 17831975 -235424608 - L1PB1 LINE L1 -1241 5621 3042 183 42 0 0 chr2 17831975 17831999 -235424584 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 13627 191 81 7 chr2 17831999 17834437 -235422146 - L1PB1 LINE L1 -3820 3042 6 234 0 0 0 chr2 17834452 17834478 -235422105 + (T)n Simple_repeat Simple_repeat 1 26 0 24 0 0 0 chr2 17835511 17835535 -235421048 + AT_rich Low_complexity Low_complexity 1 24 0 344 366 105 16 chr2 17836242 17836544 -235420039 - L2 LINE L2 -222 3050 2702 1729 160 16 35 chr2 17836546 17836864 -235419719 - AluJo SINE Alu 0 312 1 633 209 0 22 chr2 17837442 17837624 -235418959 + GA-rich Low_complexity Low_complexity 1 178 0 198 71 0 0 chr2 17838571 17838599 -235417984 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2106 113 3 10 chr2 17838653 17838954 -235417629 - AluSx SINE Alu -13 299 1 318 310 32 10 chr2 17839794 17839913 -235416670 + MIR SINE MIR 16 144 -64 430 261 127 30 chr2 17839959 17840038 -235416545 + MIR SINE MIR 63 133 -129 1454 262 47 33 chr2 17840038 17840550 -235416033 + LTR53 LTR ERVL 1 519 0 430 261 127 30 chr2 17840550 17840635 -235415948 + MIR SINE MIR 133 243 -19 231 327 127 0 chr2 17841043 17841153 -235415430 + MIR3 SINE MIR 33 156 -52 * 268 243 19 87 chr2 17841151 17841254 -235415329 - L2 LINE L2 -31 3241 3146 981 276 56 43 chr2 17841341 17841787 -235414796 + MLT1J LTR MaLR 1 452 -59 242 302 31 10 chr2 17842725 17842821 -235413762 - L2 LINE L2 -24 3289 3192 2345 110 0 0 chr2 17843176 17843485 -235413098 + AluSg SINE Alu 1 309 -1 2658 39 0 0 chr2 17843657 17843962 -235412621 + AluY SINE Alu 1 305 -6 1343 191 135 28 chr2 17843984 17844309 -235412274 + MLT1A1 LTR MaLR 6 365 0 188 294 29 0 chr2 17844498 17844566 -235412017 + MIR SINE MIR 121 190 -72 200 186 47 0 chr2 17846028 17846071 -235410512 - L2 LINE L2 -85 3187 3143 312 245 10 59 chr2 17846369 17846471 -235410112 - L1MEd LINE L1 -5538 581 485 804 145 0 0 chr2 17847666 17847811 -235408772 + (TCCA)n Simple_repeat Simple_repeat 3 147 0 180 0 0 0 chr2 17848225 17848245 -235408338 + (CAT)n Simple_repeat Simple_repeat 3 22 0 2271 112 0 3 chr2 17849519 17849824 -235406759 - AluSx SINE Alu -8 304 1 415 90 0 45 chr2 17849847 17849914 -235406669 - MLT1A1 LTR MaLR -300 65 2 1761 151 191 38 chr2 17850151 17850543 -235406040 - LTR47A LTR ERVL 0 452 1 2419 124 32 5 chr2 17850607 17850987 -235405596 + L1PA16 LINE L1 5768 6157 -9 933 226 43 0 chr2 17851139 17851325 -235405258 - MER63A DNA MER1_type -16 194 1 1736 178 4 0 chr2 17851636 17851911 -235404672 + AluJo SINE Alu 2 277 -35 198 0 0 0 chr2 17851911 17851933 -235404650 + (GAAAA)n Simple_repeat Simple_repeat 4 25 0 655 215 11 11 chr2 17851935 17852112 -235404471 + GA-rich Low_complexity Low_complexity 2 178 0 237 274 0 0 chr2 17852112 17852163 -235404420 + polypurine Low_complexity Low_complexity 3 53 0 197 378 67 0 chr2 17852288 17852407 -235404176 + MIR3 SINE MIR 56 182 -26 3508 103 10 12 chr2 17852805 17853243 -235403340 + L1PB2 LINE L1 5664 6102 -49 2750 91 10 58 chr2 17853243 17853637 -235402946 - THE1C LTR MaLR 0 375 1 3508 103 10 12 chr2 17853637 17853685 -235402898 + L1PB2 LINE L1 6102 6149 -2 811 255 19 14 chr2 17853690 17853906 -235402677 + MER58B DNA MER1_type 122 338 -3 1969 176 29 11 chr2 17854033 17854413 -235402170 + L1PA16 LINE L1 5743 6129 -37 334 247 0 26 chr2 17854717 17854794 -235401789 + L2 LINE L2 3196 3270 -2 334 293 80 25 chr2 17855247 17855420 -235401163 + MIR SINE MIR 5 184 -65 219 36 0 0 chr2 17856253 17856281 -235400302 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2101 146 0 3 chr2 17856533 17856842 -235399741 - AluSx SINE Alu -4 308 1 622 239 48 32 chr2 17856934 17857122 -235399461 + LTR40b LTR ERVL 272 462 0 702 202 22 165 chr2 17857428 17857700 -235398883 + MIR SINE MIR 4 236 -26 563 255 54 13 chr2 17858418 17858567 -235398016 - MIR SINE MIR -88 174 20 231 307 51 88 chr2 17858600 17858737 -235397846 + L2 LINE L2 3140 3271 -1 263 286 33 104 chr2 17860389 17860519 -235396064 - MIR SINE MIR -38 170 55 2114 119 3 3 chr2 17860519 17860804 -235395779 + AluSx SINE Alu 1 285 -27 263 286 33 104 chr2 17860804 17860855 -235395728 - MIR SINE MIR -153 55 2 706 281 106 0 chr2 17861188 17861405 -235395178 - MIR SINE MIR -12 250 11 1822 216 92 15 chr2 17861480 17861948 -235394635 + MLT1D LTR MaLR 1 504 -1 293 365 36 16 chr2 17862066 17862258 -235394325 + L3b LINE CR1 1177 1372 -211 872 233 45 29 chr2 17862450 17862759 -235393824 + L1MC5 LINE L1 7618 7931 -30 325 222 0 48 chr2 17862760 17862927 -235393656 + GA-rich Low_complexity Low_complexity 1 159 0 2700 136 64 5 chr2 17862977 17863381 -235393202 - MSTA LTR MaLR 0 428 1 180 83 0 0 chr2 17863408 17863432 -235393151 + MIR SINE MIR 124 147 -115 286 253 0 13 chr2 17864191 17864266 -235392317 - MER116 DNA Mariner -1 79 6 220 139 0 0 chr2 17864794 17864830 -235391753 + L2 LINE L2 3016 3051 -221 513 239 91 35 chr2 17865970 17866157 -235390426 + MIR SINE MIR 3 195 -63 185 224 17 0 chr2 17866168 17866226 -235390357 + (TTA)n Simple_repeat Simple_repeat 1 59 0 281 301 36 24 chr2 17870414 17870497 -235386086 - MIR SINE MIR -167 95 12 2490 123 103 5 chr2 17870671 17871061 -235385522 + MSTA LTR MaLR 1 428 0 254 324 150 30 chr2 17871103 17871436 -235385147 - L2 LINE L2 -481 2833 2461 620 236 56 38 chr2 17871593 17871736 -235384847 + L1MB8 LINE L1 3115 3254 -2892 1716 156 0 18 chr2 17871736 17872019 -235384564 + AluSx SINE Alu 33 310 -2 620 236 56 38 chr2 17872019 17872163 -235384420 + L1MB8 LINE L1 3254 3407 -2739 3222 119 3 108 chr2 17872194 17872473 -235384110 - MER4B LTR ERV1 -36 574 267 2110 155 62 6 chr2 17872473 17872827 -235383756 + THE1C LTR MaLR 1 374 -1 10924 115 7 46 chr2 17872829 17874473 -235382110 + THE1C-int LTR MaLR 2 1580 0 2323 123 56 8 chr2 17874473 17874831 -235381752 + THE1C LTR MaLR 1 375 0 3222 119 3 108 chr2 17874831 17875188 -235381395 - MER4B LTR ERV1 -342 268 1 4857 212 40 16 chr2 17875188 17876403 -235380180 + L1MB8 LINE L1 3406 4649 -1497 3486 175 84 46 chr2 17876462 17877781 -235378802 + L1MB8 LINE L1 4819 6178 0 683 143 0 0 chr2 17877789 17877880 -235378703 + FLAM_C SINE Alu 28 118 -25 26 0 0 0 chr2 17877886 17877912 -235378671 + AT_rich Low_complexity Low_complexity 1 26 0 793 212 148 116 chr2 17877926 17878316 -235378267 + L1MC5 LINE L1 7127 7503 -458 229 65 0 0 chr2 17878316 17878362 -235378221 - LTR66 LTR ERVL -171 439 394 793 212 148 116 chr2 17878362 17878399 -235378184 + L1MC5 LINE L1 7503 7537 -424 1955 156 167 16 chr2 17878399 17878771 -235377812 + MSTA LTR MaLR 1 428 0 793 212 148 116 chr2 17878771 17879072 -235377511 + L1MC5 LINE L1 7537 7926 -35 291 268 24 12 chr2 17879142 17879224 -235377359 + L2 LINE L2 3190 3272 0 226 296 148 9 chr2 17879231 17879339 -235377244 - MIR SINE MIR -74 188 66 219 287 103 35 chr2 17880753 17880840 -235375743 + MIR SINE MIR 19 111 -97 883 208 35 55 chr2 17881861 17881927 -235374656 - AluJb SINE Alu -113 199 133 2067 156 0 0 chr2 17881927 17882228 -235374355 - AluSx SINE Alu -11 301 1 883 208 35 55 chr2 17882228 17882363 -235374220 - AluJb SINE Alu -179 133 2 410 227 154 9 chr2 17882515 17882625 -235373958 - L2 LINE L2 -1 3312 3187 1471 163 21 4 chr2 17882642 17882881 -235373702 + AluJo SINE Alu 1 243 -69 37 0 0 0 chr2 17884647 17884684 -235371899 + AT_rich Low_complexity Low_complexity 1 37 0 1559 155 41 31 chr2 17884708 17884998 -235371585 - AluSx SINE Alu -19 293 1 2270 115 3 0 chr2 17886560 17886864 -235369719 + AluSx SINE Alu 1 305 -7 376 100 0 33 chr2 17887134 17887194 -235369389 + MER5B DNA MER1_type 1 58 -120 973 161 42 7 chr2 17887973 17888185 -235368398 - L1MD3 LINE L1 0 7995 7577 2338 102 0 0 chr2 17888869 17889174 -235367409 - AluSx SINE Alu -7 305 1 2317 82 0 41 chr2 17890677 17890992 -235365591 + AluSq SINE Alu 1 302 -11 318 367 30 30 chr2 17891391 17891560 -235365023 - MIR3 SINE MIR -37 171 3 610 189 63 24 chr2 17891655 17891782 -235364801 + MER3 DNA MER1_type 13 144 -65 216 341 8 41 chr2 17892065 17892188 -235364395 - L3 LINE CR1 -130 1447 1329 984 167 107 38 chr2 17892321 17892543 -235364040 + MER33 DNA MER1_type 44 288 -2297 2032 142 0 3 chr2 17892543 17892839 -235363744 + AluSx SINE Alu 1 295 -17 984 167 107 38 chr2 17892839 17892879 -235363704 + MER33 DNA MER1_type 288 324 0 687 124 0 50 chr2 17893031 17893152 -235363431 - FLAM_C SINE Alu -1 142 28 1929 145 7 0 chr2 17893157 17893439 -235363144 - AluJb SINE Alu -28 284 1 3195 88 4 77 chr2 17893999 17894477 -235362106 - MLT2A1 LTR ERVL 0 444 2 305 260 70 40 chr2 17894667 17894767 -235361816 - MIR3 SINE MIR -102 106 4 1987 162 0 0 chr2 17895478 17895781 -235360802 - AluSx SINE Alu -3 309 7 28 29 0 0 chr2 17897453 17897488 -235359095 + AT_rich Low_complexity Low_complexity 1 35 0 436 319 194 53 chr2 17897766 17899569 -235357014 - L2 LINE L2 -2 3270 1220 22 0 0 0 chr2 17899650 17899672 -235356911 + AT_rich Low_complexity Low_complexity 1 22 0 1734 81 0 0 chr2 17899684 17899893 -235356690 + AluSc SINE Alu 86 294 -15 303 243 0 0 chr2 17900682 17900752 -235355831 + MER116 DNA Mariner 2 71 -9 642 136 0 0 chr2 17901385 17901488 -235355095 - L1MB8 LINE L1 -1 6177 6075 248 191 0 0 chr2 17901491 17901533 -235355050 - L1M4b LINE L1 -6816 43 2 190 336 44 44 chr2 17902142 17902255 -235354328 + L2 LINE L2 3198 3310 -3 577 263 8 0 chr2 17902391 17902524 -235354059 + MER58B DNA MER1_type 206 339 -2 330 358 12 18 chr2 17902863 17903028 -235353555 + L2 LINE L2 2933 3096 -176 180 158 0 0 chr2 17903209 17903247 -235353336 + (TTATA)n Simple_repeat Simple_repeat 4 41 0 1678 178 7 13 chr2 17903584 17903893 -235352690 - AluJb SINE Alu -5 307 1 2191 99 0 10 chr2 17903900 17904203 -235352380 - AluSg SINE Alu -10 300 1 237 191 43 0 chr2 17904995 17905042 -235351541 - MER66A LTR ERV1 -147 331 283 207 176 0 0 chr2 17905736 17905770 -235350813 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 215 255 20 0 chr2 17905884 17905935 -235350648 + L3 LINE CR1 1521 1572 -5 1713 158 13 28 chr2 17907199 17907516 -235349067 + AluSx SINE Alu 1 312 0 974 229 28 47 chr2 17908106 17908359 -235348224 + MIR SINE MIR 2 249 -13 258 232 14 0 chr2 17908431 17908500 -235348083 + (TA)n Simple_repeat Simple_repeat 1 70 0 285 272 193 0 chr2 17909216 17909330 -235347253 - L2 LINE L2 -782 2532 2397 268 311 172 0 chr2 17910749 17910929 -235345654 + L2 LINE L2 1894 2104 -1210 1725 174 17 0 chr2 17911025 17911318 -235345265 + AluJb SINE Alu 3 300 -12 2076 288 180 12 chr2 17912038 17913166 -235343417 + L2 LINE L2 1735 3052 -261 581 249 133 25 chr2 17914541 17914782 -235341801 - L2 LINE L2 -1 3312 3046 1720 173 31 0 chr2 17915095 17915384 -235341199 - AluSx SINE Alu -14 298 1 2186 112 0 16 chr2 17915390 17915704 -235340879 - AluSx SINE Alu -3 309 1 477 186 153 8 chr2 17915963 17916087 -235340496 - MER104 DNA Tc2 -38 142 1 1188 138 53 0 chr2 17916656 17916844 -235339739 - Tigger2a DNA MER2_type -3 431 234 1504 134 29 12 chr2 17916910 17917156 -235339427 - Tigger2a DNA MER2_type -183 251 2 21 0 0 0 chr2 17917523 17917544 -235339039 + AT_rich Low_complexity Low_complexity 1 21 0 1518 222 109 17 chr2 17917608 17917737 -235338846 - Charlie1b DNA MER1_type -2239 522 406 2035 125 44 36 chr2 17917737 17918098 -235338485 - THE1B LTR MaLR 0 364 1 1518 222 109 17 chr2 17918098 17918446 -235338137 - Charlie1b DNA MER1_type -2355 406 1 381 311 0 10 chr2 17919403 17919506 -235337077 - L2 LINE L2 -12 3301 3200 1973 120 11 7 chr2 17919608 17919929 -235336654 - AluSq SINE Alu 0 322 1 2016 197 113 2 chr2 17920986 17922312 -235334271 + L1MDa LINE L1 1429 2898 -3642 3870 175 100 1 chr2 17922384 17923246 -235333337 - L1MB7 LINE L1 -17 6167 5221 342 264 13 110 chr2 17923469 17923624 -235332959 - L1MB7 LINE L1 -1973 4173 4034 257 234 60 54 chr2 17923629 17923813 -235332770 - L1MEc LINE L1 -4180 2216 2032 259 257 91 27 chr2 17925817 17925977 -235330606 + L1ME LINE L1 5367 5534 -587 465 312 42 8 chr2 17926002 17926143 -235330440 + MIR SINE MIR 21 162 -46 2440 132 75 30 chr2 17926273 17926701 -235329882 - L1MA4A LINE L1 -29 6274 5824 2160 121 0 13 chr2 17926701 17927015 -235329568 - AluSq SINE Alu -3 310 1 2440 132 75 30 chr2 17927015 17927027 -235329556 - L1MA4A LINE L1 -479 5824 5814 7016 32 1 0 chr2 17927033 17928566 -235328017 - L1PA4 LINE L1 0 6155 4599 1153 134 45 25 chr2 17928676 17928877 -235327706 - MER2 DNA MER2_type -139 206 2 638 191 20 14 chr2 17928969 17929116 -235327467 - L1MC4 LINE L1 -138 7904 7757 1323 265 38 36 chr2 17929206 17929678 -235326905 - L1MC4 LINE L1 -502 7540 7068 937 149 0 0 chr2 17929929 17930077 -235326506 - AluJb SINE Alu -18 294 147 1265 273 102 39 chr2 17930086 17930547 -235326036 - L1MC4a LINE L1 -889 7155 6666 1593 220 92 96 chr2 17930581 17931418 -235325165 - L1MC4a LINE L1 -1447 6597 5764 2394 101 90 3 chr2 17931418 17931785 -235324798 - Tigger4(Zombi) DNA MER2_type 0 2731 2333 1294 153 0 100 chr2 17931807 17932019 -235324564 - Tigger4(Zombi) DNA MER2_type -2507 224 39 1923 133 0 20 chr2 17932019 17932312 -235324271 - AluSx SINE Alu -25 287 1 1294 153 0 100 chr2 17932312 17932348 -235324235 - Tigger4(Zombi) DNA MER2_type -2692 39 1 507 270 100 104 chr2 17932491 17932983 -235323600 - L1MC4a LINE L1 -751 5631 5142 231 289 0 26 chr2 17933061 17933137 -235323446 - L1MC4a LINE L1 -4739 1645 1572 396 292 96 55 chr2 17933186 17933477 -235323106 - HAL1 LINE L1 -1129 1378 1076 189 0 0 0 chr2 17933650 17933671 -235322912 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1825 169 3 10 chr2 17933674 17933964 -235322619 - AluJo SINE Alu -24 288 1 236 361 116 7 chr2 17935003 17935158 -235321425 - L3 LINE CR1 -5 1572 1401 461 222 111 26 chr2 17935233 17935350 -235321233 + L2 LINE L2 3187 3313 0 1221 263 22 3 chr2 17935724 17936036 -235320547 - L1MC4a LINE L1 -5696 867 550 777 100 67 0 chr2 17936237 17936357 -235320226 + Tigger1 DNA MER2_type 1626 1753 -665 354 179 39 13 chr2 17936367 17936445 -235320138 - L1MC4a LINE L1 -6261 302 223 10345 124 25 5 chr2 17936539 17938126 -235318457 + Tigger1 DNA MER2_type 1 1618 -800 789 146 0 8 chr2 17938126 17938249 -235318334 + Tigger1 DNA MER2_type 2294 2415 -3 1337 175 100 65 chr2 17938598 17939027 -235317556 + L1MC4 LINE L1 6715 7158 -884 281 281 48 14 chr2 17939315 17939461 -235317122 - L1ME4a LINE L1 -3 6118 5968 1942 147 0 43 chr2 17939694 17940020 -235316563 - AluJo SINE Alu 0 312 1 2528 227 19 20 chr2 17941334 17942029 -235314554 + L1M4 LINE L1 4027 4720 -1426 283 169 84 0 chr2 17942022 17942093 -235314490 + L1MA10 LINE L1 6256 6332 -2 * 2697 263 84 30 chr2 17942141 17944473 -235312110 + L1ME3 LINE L1 863 3458 -2968 2362 85 3 10 chr2 17944637 17944943 -235311640 + AluSp SINE Alu 1 304 -9 1614 248 138 43 chr2 17944971 17946036 -235310547 + L1ME3 LINE L1 5231 6395 -47 25 31 0 0 chr2 17946483 17946515 -235310068 + AT_rich Low_complexity Low_complexity 1 32 0 45 79 0 0 chr2 17946757 17946858 -235309725 + AT_rich Low_complexity Low_complexity 1 101 0 1474 133 8 52 chr2 17946872 17947121 -235309462 - AluJb SINE Alu -8 304 67 1076 162 0 12 chr2 17947582 17947749 -235308834 + AluSc SINE Alu 125 289 -20 260 267 67 42 chr2 17948690 17948855 -235307728 + MIR SINE MIR 94 262 0 205 240 150 20 chr2 17949852 17949952 -235306631 + L2 LINE L2 2952 3064 -249 42 65 0 0 chr2 17950010 17950087 -235306496 + AT_rich Low_complexity Low_complexity 1 77 0 322 333 63 53 chr2 17950248 17950533 -235306050 + MARNA DNA Mariner 105 392 -194 247 321 37 0 chr2 17950645 17950726 -235305857 - MIR SINE MIR -177 85 2 2013 157 0 6 chr2 17950736 17951049 -235305534 - AluSx SINE Alu 0 312 2 1513 213 7 10 chr2 17951618 17951919 -235304664 - AluJo SINE Alu -12 300 1 182 238 24 0 chr2 17952586 17952628 -235303955 - L2 LINE L2 -10 3303 3261 250 232 122 0 chr2 17953930 17954012 -235302571 - HsTC2 DNA Tc2 -1806 92 1 619 275 161 45 chr2 17955830 17956063 -235300520 - L2 LINE L2 0 3313 3108 2135 97 0 14 chr2 17956063 17956382 -235300201 - AluSx SINE Alu 0 315 1 619 275 161 45 chr2 17956382 17956951 -235299632 - L2 LINE L2 -205 3108 2398 428 330 59 14 chr2 17957622 17957843 -235298740 - Charlie8 DNA MER1_type -2183 234 4 270 267 128 0 chr2 17959288 17959374 -235297209 - L2 LINE L2 -8 3264 3168 287 122 27 27 chr2 17959683 17959757 -235296826 + CT-rich Low_complexity Low_complexity 3 76 0 399 291 133 14 chr2 17960350 17960560 -235296023 - MIR SINE MIR 0 262 28 1049 200 9 36 chr2 17962106 17962331 -235294252 - MER20 DNA MER1_type 0 219 1 24 0 0 0 chr2 17962934 17962958 -235293625 + AT_rich Low_complexity Low_complexity 1 24 0 714 274 103 4 chr2 17963829 17964088 -235292495 + L1ME LINE L1 5558 5844 -297 550 323 35 13 chr2 17964097 17964329 -235292254 - MIR SINE MIR -24 238 2 227 246 193 29 chr2 17964390 17964561 -235292022 + L1ME4a LINE L1 5902 6100 -21 937 203 44 22 chr2 17965625 17965852 -235290731 + Charlie4 DNA MER1_type 17 248 -1713 706 231 65 19 chr2 17967591 17967807 -235288776 + MIR SINE MIR 29 254 -8 371 270 0 10 chr2 17968189 17968289 -235288294 + MIR SINE MIR 162 260 -2 21 0 0 0 chr2 17968556 17968577 -235288006 + AT_rich Low_complexity Low_complexity 1 21 0 28 29 0 0 chr2 17970554 17970589 -235285994 + GC_rich Low_complexity Low_complexity 1 35 0 231 88 0 0 chr2 17970665 17970699 -235285884 + (CGGGG)n Simple_repeat Simple_repeat 5 38 0 28 48 0 0 chr2 17970750 17970792 -235285791 + GC_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr2 17970855 17970876 -235285707 + GC_rich Low_complexity Low_complexity 1 21 0 2017 164 0 0 chr2 17974137 17974449 -235282134 + AluJb SINE Alu 1 312 0 211 244 268 16 chr2 17974482 17974609 -235281974 + MIR3 SINE MIR 45 203 -5 299 323 91 70 chr2 17975105 17975390 -235281193 + L2 LINE L2 2977 3267 -5 2205 119 3 0 chr2 17975394 17975688 -235280895 + AluSx SINE Alu 1 295 -17 483 292 0 0 chr2 17975998 17976111 -235280472 - MER81 DNA DNA 0 114 2 684 304 44 15 chr2 17976118 17976391 -235280192 + MLT1J LTR MaLR 83 363 -148 775 215 6 6 chr2 17976513 17976671 -235279912 + Charlie4 DNA MER1_type 1803 1960 -1 696 254 93 18 chr2 17976672 17977027 -235279556 + L2 LINE L2 2684 3070 -243 43416 54 1 0 chr2 17977052 17983201 -235273382 + L1PA5 LINE L1 11 6163 0 516 247 5 76 chr2 17983232 17983455 -235273128 + L2 LINE L2 3107 3313 0 369 0 0 0 chr2 17984273 17984314 -235272269 + (CA)n Simple_repeat Simple_repeat 2 42 0 538 273 92 55 chr2 17984628 17984954 -235271629 - MER102b DNA MER1_type -2 339 2 240 295 265 0 chr2 17985036 17985236 -235271347 + L2 LINE L2 2233 2485 -829 825 241 35 18 chr2 17985543 17985771 -235270812 + MIR SINE MIR 30 261 -1 2258 104 0 17 chr2 17985859 17986156 -235270427 + AluSx SINE Alu 1 292 -20 217 280 80 0 chr2 17986392 17986467 -235270116 + L2 LINE L2 3139 3219 -53 560 222 144 0 chr2 17986929 17987109 -235269474 - MIR SINE MIR -10 252 47 22 0 0 0 chr2 17987247 17987269 -235269314 + AT_rich Low_complexity Low_complexity 1 22 0 318 252 9 26 chr2 17987270 17987385 -235269198 + MIR SINE MIR 149 261 -1 195 42 0 0 chr2 17987390 17987414 -235269169 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1498 106 0 0 chr2 17987419 17987618 -235268965 - AluSc SINE Alu -25 284 86 5677 145 21 7 chr2 17987718 17988816 -235267767 + L1PA16 LINE L1 5051 6163 -3 326 183 28 0 chr2 17991090 17991161 -235265422 - L1ME4a LINE L1 -75 6046 5974 2162 124 0 7 chr2 17991517 17991823 -235264760 + AluJo SINE Alu 1 304 -8 293 317 33 17 chr2 17991829 17991949 -235264634 - MIR SINE MIR -66 142 21 285 29 0 0 chr2 17992720 17992754 -235263829 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 186 133 0 0 chr2 17993145 17993175 -235263408 + (TA)n Simple_repeat Simple_repeat 2 31 0 670 187 71 33 chr2 17993220 17993402 -235263181 + MER53 DNA DNA 1 189 0 233 167 0 67 chr2 17993795 17993855 -235262728 + (TCTCTG)n Simple_repeat Simple_repeat 6 61 0 182 91 30 0 chr2 17993865 17993898 -235262685 + CT-rich Low_complexity Low_complexity 2 35 0 325 268 79 37 chr2 17994660 17994824 -235261759 + MIR SINE MIR 65 235 -27 194 308 48 48 chr2 17994832 17994936 -235261647 - L2 LINE L2 0 3272 3169 210 295 26 0 chr2 17994964 17995042 -235261541 + MIR SINE MIR 13 92 -170 2490 138 16 47 chr2 17995312 17995718 -235260865 - MER57B LTR ERV1 0 434 42 2204 110 0 0 chr2 17995718 17996009 -235260574 + AluSg SINE Alu 3 293 -17 2490 138 16 47 chr2 17996009 17996050 -235260533 - MER57B LTR ERV1 -392 42 1 430 268 172 0 chr2 17997560 17997758 -235258825 - MIR SINE MIR 0 262 31 249 275 22 22 chr2 17999320 17999411 -235257172 - MLT1K LTR MaLR -308 280 190 1824 169 0 29 chr2 17999939 18000247 -235256336 - AluJo SINE Alu -13 299 1 596 334 81 46 chr2 18001393 18002072 -235254511 - L1MEd LINE L1 -5366 753 51 2106 142 3 0 chr2 18003584 18003893 -235252690 - AluSx SINE Alu -2 310 1 282 304 174 0 chr2 18004474 18004589 -235251994 - L2 LINE L2 0 3313 3179 1681 183 18 0 chr2 18005716 18006000 -235250583 + AluJb SINE Alu 1 289 -23 884 184 14 0 chr2 18006269 18006416 -235250167 + BC200 scRNA scRNA 2 150 -50 4176 171 8 19 chr2 18056928 18057659 -235198924 - Ricksha DNA DNA -814 2432 1710 594 138 8 54 chr2 18057644 18057774 -235198809 - Ricksha DNA DNA -1049 132 9 * 352 195 81 0 chr2 18057930 18058017 -235198566 - L1MB7 LINE L1 0 6184 6091 * 1112 143 55 46 chr2 18058013 18058251 -235198332 - L1M4 LINE L1 -650 5534 5295 226 247 13 65 chr2 18058424 18058501 -235198082 + MIR SINE MIR 66 138 -124 287 345 34 20 chr2 18058953 18059101 -235197482 + MIR SINE MIR 20 169 -93 487 313 133 23 chr2 18059109 18059461 -235197122 + L2 LINE L2 2882 3272 0 201 325 13 13 chr2 18059484 18059561 -235197022 + MIR SINE MIR 172 248 -14 2059 151 3 3 chr2 18059828 18060146 -235196437 + MSTA LTR MaLR 111 428 0 349 300 10 10 chr2 18060226 18060326 -235196257 - HAL1 LINE L1 -1326 1181 1082 1553 128 23 19 chr2 18060948 18061206 -235195377 + AluSq SINE Alu 1 259 -54 976 152 95 14 chr2 18061311 18061521 -235195062 - MLT1B LTR MaLR -78 312 86 584 147 32 0 chr2 18061583 18061678 -235194905 - MLT1B LTR MaLR -292 98 1 228 309 96 21 chr2 18063564 18063658 -235192925 + MIR SINE MIR 37 137 -71 1978 318 30 20 chr2 18063908 18064818 -235191765 + HERVI LTR ERV1 4840 5758 -2027 185 250 0 21 chr2 18065869 18065917 -235190666 - MER5C DNA MER1_type -277 47 1 * 600 341 119 25 chr2 18065917 18066469 -235190114 - L2 LINE L2 -609 2705 2102 247 239 42 14 chr2 18066724 18066795 -235189788 + MIR3 SINE MIR 126 198 -10 184 255 21 106 chr2 18067075 18067169 -235189414 + L2 LINE L2 2647 2732 -582 339 320 23 68 chr2 18067768 18067987 -235188596 + LTR67 LTR ERVL 349 557 0 363 270 20 0 chr2 18067987 18068087 -235188496 + MIR SINE MIR 159 260 -2 2250 116 123 76 chr2 18068192 18068558 -235188025 + MSTA LTR MaLR 1 389 -39 2261 99 3 34 chr2 18068558 18068881 -235187702 - AluSp SINE Alu 0 313 1 2250 116 123 76 chr2 18068881 18068921 -235187662 + MSTA LTR MaLR 389 426 -2 989 165 57 16 chr2 18068926 18069120 -235187463 + MER20 DNA MER1_type 18 219 0 2942 261 43 31 chr2 18069770 18070752 -235185831 - L1PA13 LINE L1 -4509 2278 1354 2597 138 6 3 chr2 18070962 18071325 -235185258 - THE1B LTR MaLR 0 364 1 1305 85 6 0 chr2 18071325 18071502 -235185081 - THE1B-int LTR MaLR 0 1580 1403 234 170 0 0 chr2 18071604 18071651 -235184932 + G-rich Low_complexity Low_complexity 2 48 0 371 299 0 12 chr2 18071654 18071898 -235184685 + L1PA4 LINE L1 5914 6154 -1 1166 105 6 11 chr2 18071900 18072081 -235184502 - MSTA LTR MaLR -248 180 1 1017 204 18 69 chr2 18072081 18072356 -235184227 + L1ME1 LINE L1 5904 6164 -2 201 138 0 0 chr2 18073081 18073110 -235183473 + (TATATG)n Simple_repeat Simple_repeat 3 31 0 529 269 0 6 chr2 18073117 18073292 -235183291 - AluSc SINE Alu -38 271 98 12631 31 25 8 chr2 18073657 18075244 -235181339 - L1P LINE L1 -2065 4081 2468 21 0 0 0 chr2 18075382 18075403 -235181180 + AT_rich Low_complexity Low_complexity 1 21 0 239 282 13 39 chr2 18076253 18076331 -235180252 + MER5A DNA MER1_type 84 159 -30 219 231 31 46 chr2 18076279 18076344 -235180239 - MER5A DNA MER1_type -98 91 28 * 1764 310 33 33 chr2 18076520 18077279 -235179304 - HERVI LTR ERV1 -129 7656 6898 361 152 0 0 chr2 18077514 18077580 -235179003 - L1M4 LINE L1 -2444 3702 3637 1898 180 30 13 chr2 18077581 18078015 -235178568 + MER61D LTR ERV1 1 501 0 680 255 119 54 chr2 18078015 18078592 -235177991 + MER61D-int LTR ERV1 2 568 -2520 931 193 87 94 chr2 18078666 18078973 -235177610 + MER52-int LTR ERV1 279 893 -4740 * 2979 197 10 21 chr2 18078972 18079675 -235176908 + MER52-int LTR ERV1 2174 4825 -392 223 264 19 0 chr2 18079802 18079855 -235176728 - MIR SINE MIR -86 122 69 3063 158 26 2 chr2 18080460 18080953 -235175630 + Tigger7 DNA MER2_type 22 526 -1961 587 194 0 0 chr2 18080946 18081039 -235175544 + Tigger7 DNA MER2_type 2495 2587 0 * 269 314 49 0 chr2 18081077 18081179 -235175404 - MIR SINE MIR -71 191 85 292 241 36 12 chr2 18081862 18081945 -235174638 + CT-rich Low_complexity Low_complexity 4 88 0 1471 296 119 16 chr2 18081973 18082623 -235173960 - L1MEc LINE L1 -4383 2013 1245 3259 55 3 0 chr2 18082623 18083008 -235173575 - L1PA5 LINE L1 0 6154 5769 1471 296 119 16 chr2 18083008 18083245 -235173338 - L1MEc LINE L1 -5151 1245 1034 301 151 19 0 chr2 18083558 18083611 -235172972 - L1M LINE L1 -829 5351 5298 1902 293 88 23 chr2 18083614 18084474 -235172109 - L1MEc LINE L1 -5459 937 22 663 277 52 29 chr2 18084483 18084830 -235171753 - L1MEc LINE L1 -4306 2816 2462 491 303 11 17 chr2 18084884 18085062 -235171521 + L1MCc LINE L1 1220 1396 -5027 715 268 95 53 chr2 18085096 18085696 -235170887 - L1MEc LINE L1 -4613 2328 1704 2106 154 10 3 chr2 18085741 18086052 -235170531 - MER1B DNA MER1_type 0 339 27 421 286 29 19 chr2 18086052 18086262 -235170321 - L1MEc LINE L1 -4918 1505 1294 1171 257 107 15 chr2 18086480 18086959 -235169624 - L1M4 LINE L1 -1621 4525 4003 1099 110 186 80 chr2 18086959 18087223 -235169360 + THE1C LTR MaLR 1 292 -83 6895 120 29 29 chr2 18087223 18088335 -235168248 + THE1C-int LTR MaLR 469 1580 0 2001 111 52 83 chr2 18088335 18088722 -235167861 + THE1C LTR MaLR 1 375 0 1262 177 33 23 chr2 18088722 18089021 -235167562 - L1M4 LINE L1 -2139 4007 3706 3537 172 24 23 chr2 18089462 18090544 -235166039 - L1PA16 LINE L1 -213 5953 4873 * 3917 214 20 50 chr2 18090543 18091657 -235164926 - L1M4 LINE L1 -2438 3708 2629 4167 141 34 36 chr2 18091770 18092929 -235163654 + MER61-int LTR ERV1 609 1970 -3616 * 4283 144 24 20 chr2 18092923 18093789 -235162794 + MER61-int LTR ERV1 1346 4387 -3080 5067 83 3 0 chr2 18093789 18094441 -235162142 + L1PA8A LINE L1 5309 5962 -169 373 315 132 30 chr2 18094547 18094744 -235161839 + L2 LINE L2 3039 3255 -17 250 280 13 0 chr2 18094919 18094994 -235161589 + L2 LINE L2 3195 3270 -2 24 53 0 0 chr2 18095453 18095491 -235161092 + AT_rich Low_complexity Low_complexity 1 38 0 11115 105 29 17 chr2 18095714 18097404 -235159179 + MER61-int LTR ERV1 2287 6151 -1054 385 224 0 0 chr2 18097505 18097581 -235159002 - THE1B-int LTR MaLR -1501 79 4 1170 126 22 6 chr2 18097586 18097768 -235158815 - THE1B LTR MaLR -2 362 178 1105 320 22 19 chr2 18097768 18098181 -235158402 - L1PA13 LINE L1 -6373 414 1 922 269 67 10 chr2 18098196 18098597 -235157986 - L1M4 LINE L1 -1381 4765 4342 26 93 0 0 chr2 18098622 18098697 -235157886 + AT_rich Low_complexity Low_complexity 1 75 0 869 187 14 95 chr2 18098762 18099036 -235157547 - L1MC4 LINE L1 -113 7882 7652 1714 150 32 35 chr2 18099051 18099390 -235157193 - L1MA7 LINE L1 -1 6290 5953 412 239 34 18 chr2 18099412 18099550 -235157033 - MER34 LTR ERV1 -432 110 1 2111 75 16 38 chr2 18100541 18100859 -235155724 - AluY SINE Alu 0 311 1 1680 316 48 30 chr2 18101323 18102429 -235154154 - BaEV-int LTR ERV1 -4558 2091 966 559 279 70 64 chr2 18102628 18102987 -235153596 - BaEV-int LTR ERV1 -6768 1017 657 358 243 19 19 chr2 18103096 18103199 -235153384 - BaEV-int LTR ERV1 -6279 370 268 192 200 0 0 chr2 18104423 18104463 -235152120 + T-rich Low_complexity Low_complexity 1 40 0 182 118 29 0 chr2 18104922 18104956 -235151627 + CT-rich Low_complexity Low_complexity 1 35 0 1378 170 58 4 chr2 18106288 18106547 -235150036 + LTR28-int LTR ERV1 4931 5203 -14 234 194 16 16 chr2 18106553 18106615 -235149968 + LTR28 LTR ERV1 1 62 -958 * 1931 173 28 9 chr2 18106583 18106991 -235149592 + MER61D LTR ERV1 14 501 0 1144 295 39 41 chr2 18106991 18107169 -235149414 - L1M4 LINE L1 -2507 3639 3462 7301 66 7 1 chr2 18107169 18108153 -235148430 + L1PA7 LINE L1 5167 6154 0 1144 295 39 41 chr2 18108153 18108686 -235147897 - L1M4 LINE L1 -2684 3462 2929 552 282 6 18 chr2 18108698 18108868 -235147715 + MER5B DNA MER1_type 11 178 0 181 250 17 33 chr2 18109058 18109118 -235147465 - MER5A DNA MER1_type -124 65 7 573 307 6 6 chr2 18109724 18109890 -235146693 - L1MCc LINE L1 -5126 1297 1132 423 283 64 106 chr2 18110328 18110752 -235145831 - L1MCc LINE L1 -5987 436 31 338 250 13 0 chr2 18111042 18111118 -235145465 + L2 LINE L2 3231 3307 -6 197 344 120 0 chr2 18111163 18111288 -235145295 - MIR SINE MIR -4 258 119 36 23 0 0 chr2 18111814 18111857 -235144726 + AT_rich Low_complexity Low_complexity 1 43 0 747 232 7 0 chr2 18111857 18111999 -235144584 - AluJo SINE Alu -168 144 2 317 315 16 39 chr2 18112807 18112934 -235143649 - MIR SINE MIR -57 205 82 183 333 0 46 chr2 18113081 18113168 -235143415 + L2 LINE L2 3189 3271 -1 186 171 0 0 chr2 18113480 18113521 -235143062 + CT-rich Low_complexity Low_complexity 2 42 0 288 360 0 0 chr2 18113532 18113618 -235142965 + polypyrimidine Low_complexity Low_complexity 5 90 0 204 295 62 45 chr2 18114047 18114159 -235142424 + L2 LINE L2 2626 2739 -575 12996 77 102 4 chr2 18115045 18116875 -235139708 - L1P LINE L1 -4120 2026 17 1821 126 4 0 chr2 18116875 18117137 -235139446 + MSTA LTR MaLR 166 428 0 1091 222 52 46 chr2 18117137 18117461 -235139122 - L1ME1 LINE L1 -258 5908 5583 4146 161 95 89 chr2 18117467 18117870 -235138713 + L1MC3 LINE L1 6707 7106 -679 337 256 23 0 chr2 18117870 18117956 -235138627 + MLT1F1 LTR MaLR 50 137 -430 4146 161 95 89 chr2 18117956 18118539 -235138044 + L1MC3 LINE L1 7106 7785 0 533 252 0 16 chr2 18118532 18118659 -235137924 - L1ME1 LINE L1 -576 5590 5466 * 795 220 64 46 chr2 18118689 18118971 -235137612 - L1ME1 LINE L1 -782 5364 5078 2643 71 14 11 chr2 18119072 18119437 -235137146 - L1PA8 LINE L1 -140 6032 5667 408 155 28 0 chr2 18119437 18119508 -235137075 - L1MA6 LINE L1 -319 5981 5909 1702 246 37 19 chr2 18119517 18120142 -235136441 - L1ME1 LINE L1 -1073 5073 2272 4784 141 3 11 chr2 18120161 18120915 -235135668 - L1MA4A LINE L1 -1 6302 5555 1864 147 3 46 chr2 18120915 18121241 -235135342 - AluJb SINE Alu 0 312 1 1789 113 19 20 chr2 18121243 18121675 -235134908 - L1M1 LINE L1 -755 5391 5053 826 169 81 6 chr2 18121674 18121974 -235134609 + L1 LINE L1 3114 4274 -1872 * 2292 117 0 0 chr2 18121982 18122289 -235134294 + AluSg1 SINE Alu 3 309 0 2462 178 18 2 chr2 18122293 18122747 -235133836 + L1 LINE L1 4558 5018 -1128 582 234 66 30 chr2 18122735 18122932 -235133651 - L1MEc LINE L1 -4014 2382 2179 * 1933 128 25 0 chr2 18123973 18124267 -235132316 - AluSx SINE Alu 0 301 1 1940 182 11 22 chr2 18124537 18124906 -235131677 - MLT1A1 LTR MaLR 0 365 1 729 296 141 17 chr2 18125123 18125557 -235131026 + L2 LINE L2 2559 3050 -263 1733 165 44 104 chr2 18125557 18125681 -235130902 + MLT1B LTR MaLR 1 131 -259 445 147 0 0 chr2 18125681 18125756 -235130827 + L1MA6 LINE L1 6226 6300 0 1733 165 44 104 chr2 18125756 18126044 -235130539 + MLT1B LTR MaLR 131 388 -2 647 251 147 0 chr2 18126050 18126281 -235130302 + L2 LINE L2 3049 3313 0 492 311 13 0 chr2 18127222 18127373 -235129210 - MIR SINE MIR 0 262 110 313 319 50 8 chr2 18128535 18128654 -235127929 - MIR SINE MIR -136 126 3 294 118 0 0 chr2 18128747 18128798 -235127785 - Alu SINE Alu 0 302 252 2075 54 10 61 chr2 18128898 18129195 -235127388 - AluY SINE Alu -29 282 1 209 286 0 0 chr2 18130587 18130636 -235125947 + L3 LINE CR1 1523 1571 -6 409 329 92 50 chr2 18130919 18131420 -235125163 + L2 LINE L2 1386 1907 -1407 1148 313 198 23 chr2 18131461 18132330 -235124253 + L2 LINE L2 1449 2527 -787 2524 151 53 19 chr2 18132330 18132742 -235123841 - MSTC LTR MaLR 0 428 3 1148 313 198 23 chr2 18132742 18132902 -235123681 + L2 LINE L2 2527 2658 -656 340 312 48 16 chr2 18134644 18134769 -235121814 - MER5A DNA MER1_type 0 189 61 2511 192 44 15 chr2 18134797 18135322 -235121261 - L1MB3 LINE L1 -2 6181 5642 404 303 25 31 chr2 18135671 18135833 -235120750 - MIR SINE MIR -25 237 77 187 253 27 40 chr2 18137074 18137149 -235119434 - MIR SINE MIR -188 74 1 565 258 132 0 chr2 18137399 18137581 -235119002 + MIR SINE MIR 50 255 -7 419 261 88 65 chr2 18138086 18138301 -235118282 + MIR SINE MIR 30 249 -13 208 185 163 87 chr2 18138337 18138429 -235118154 - MIR SINE MIR -92 170 72 1267 222 65 4 chr2 18138692 18138967 -235117616 + MLT1E2 LTR MaLR 4 295 -331 294 291 30 52 chr2 18139246 18139380 -235117203 + L2 LINE L2 2965 3095 -177 2038 118 3 3 chr2 18140198 18140487 -235116096 - AluSq SINE Alu -24 289 1 1015 136 28 34 chr2 18140487 18140664 -235115919 + THE1B LTR MaLR 189 364 0 217 242 121 44 chr2 18142248 18142339 -235114244 + MIR SINE MIR 43 140 -68 202 316 105 0 chr2 18143246 18143322 -235113261 + L2 LINE L2 2667 2750 -564 456 175 192 0 chr2 18143708 18143828 -235112755 - MER97a DNA MER1_type? -725 169 27 286 292 88 84 chr2 18144709 18144959 -235111624 + L2 LINE L2 2820 3070 -202 546 250 151 19 chr2 18144975 18145187 -235111396 + MIR SINE MIR 23 262 0 188 286 41 0 chr2 18145328 18145377 -235111206 + L2 LINE L2 3213 3263 -9 212 256 0 103 chr2 18146787 18146865 -235109718 - L2 LINE L2 -3 3269 3200 924 295 48 48 chr2 18146905 18147318 -235109265 + MLT1J2 LTR MaLR 36 448 -2 687 262 63 48 chr2 18148190 18148522 -235108061 - MLT1I LTR MaLR -2 407 71 1732 173 67 36 chr2 18148582 18148940 -235107643 + MLT1A2 LTR MaLR 6 374 0 1027 189 32 1 chr2 18149092 18149451 -235107132 - MSTB LTR MaLR -2 430 3 398 342 26 22 chr2 18151312 18151543 -235105040 + L2 LINE L2 2620 2851 -463 432 309 21 31 chr2 18151572 18151763 -235104820 - MER5A DNA MER1_type 0 189 1 2130 101 10 7 chr2 18151765 18152063 -235104520 + AluSx SINE Alu 1 299 -13 1955 255 74 14 chr2 18153404 18153988 -235102595 + L1ME3A LINE L1 5552 6170 0 1234 276 48 39 chr2 18154522 18154935 -235101648 - MLT1J1 LTR MaLR -29 417 1 198 378 145 0 chr2 18155422 18155615 -235100968 + L2 LINE L2 2601 2821 -493 204 311 33 11 chr2 18155751 18155841 -235100742 + L2 LINE L2 2979 3070 -202 327 321 15 22 chr2 18156467 18156604 -235099979 + MIR SINE MIR 10 145 -117 2033 111 14 10 chr2 18156762 18157050 -235099533 - AluSc SINE Alu -15 294 6 427 317 59 36 chr2 18157548 18157769 -235098814 - MIR SINE MIR -1 261 36 956 210 0 0 chr2 18157769 18157945 -235098638 - AluJb SINE Alu -2 310 135 1349 244 95 18 chr2 18159403 18159712 -235096871 + MLT1D LTR MaLR 13 370 -135 1814 128 146 3 chr2 18159712 18160040 -235096543 - THE1C LTR MaLR 0 375 1 1349 244 95 18 chr2 18160040 18160184 -235096399 + MLT1D LTR MaLR 370 501 -4 184 318 9 73 chr2 18160189 18160299 -235096284 + L2 LINE L2 3165 3267 -5 183 360 54 27 chr2 18160373 18160484 -235096099 - L2 LINE L2 0 3313 3200 552 282 63 90 chr2 18161089 18161501 -235095082 - MLT1E LTR MaLR -152 441 41 275 244 47 35 chr2 18161875 18161961 -235094622 + MIR SINE MIR 61 147 -115 365 295 122 29 chr2 18161973 18162112 -235094471 + LTR67 LTR ERVL 23 174 -383 233 231 0 64 chr2 18162047 18162125 -235094458 + MLT1J2 LTR MaLR 70 142 -308 * 385 345 17 0 chr2 18162608 18162727 -235093856 + MIR SINE MIR 21 141 -67 2363 81 0 37 chr2 18164163 18164486 -235092097 + AluY SINE Alu 1 311 0 279 140 0 0 chr2 18164488 18164538 -235092045 + (GGAA)n Simple_repeat Simple_repeat 3 52 0 261 310 103 75 chr2 18164610 18164784 -235091799 - L2 LINE L2 -38 3234 3056 399 73 0 0 chr2 18165085 18165140 -235091443 + (TG)n Simple_repeat Simple_repeat 2 56 0 350 211 31 86 chr2 18165862 18165990 -235090593 + MIR3 SINE MIR 84 204 -4 322 326 67 1 chr2 18167907 18168067 -235088516 - MIR SINE MIR -65 143 15 306 307 52 52 chr2 18169209 18169362 -235087221 - MIR3 SINE MIR -18 190 38 401 284 31 8 chr2 18170884 18171011 -235085572 - MIR SINE MIR -35 227 98 633 281 20 0 chr2 18171082 18171235 -235085348 + MIR SINE MIR 11 166 -96 22 0 0 0 chr2 18171272 18171294 -235085289 + AT_rich Low_complexity Low_complexity 1 22 0 271 280 100 39 chr2 18171713 18172054 -235084529 - MLT1F1 LTR MaLR -184 411 3 275 276 114 9 chr2 18172748 18172853 -235083730 - MIR SINE MIR -26 236 121 1382 206 74 53 chr2 18172886 18173375 -235083208 - MLT1D LTR MaLR 0 505 7 353 277 50 0 chr2 18173380 18173481 -235083102 - MLT1D-int LTR MaLR 0 1371 1266 307 303 138 0 chr2 18173605 18173714 -235082869 + L2 LINE L2 3190 3313 0 1439 186 4 8 chr2 18174276 18174524 -235082059 + L1PA16 LINE L1 5918 6164 -2 42252 39 29 4 chr2 18174707 18180345 -235076238 + L1P1 LINE L1 1 5780 -375 892 292 42 37 chr2 18180556 18181124 -235075459 - L1M4 LINE L1 -1501 6064 5494 242 281 123 0 chr2 18181826 18181940 -235074643 + MER5C DNA MER1_type 18 145 -179 184 266 37 156 chr2 18182093 18182311 -235074272 + L2 LINE L2 3000 3191 -81 416 295 14 7 chr2 18182449 18182588 -235073995 - L2 LINE L2 0 3313 3174 624 277 113 56 chr2 18183219 18183790 -235072793 - L2 LINE L2 0 3313 2701 1947 295 112 35 chr2 18183793 18184768 -235071815 - L2 LINE L2 -1771 1543 494 2324 113 44 41 chr2 18185337 18185700 -235070883 + THE1B LTR MaLR 1 364 0 11100 97 57 4 chr2 18185700 18187200 -235069383 + THE1B-int LTR MaLR 1 1580 0 2161 136 44 33 chr2 18187200 18187560 -235069023 + THE1B LTR MaLR 1 364 0 1578 116 26 21 chr2 18188056 18188289 -235068294 - MER46A DNA MER2_type 0 236 3 342 298 66 20 chr2 18188445 18188643 -235067940 + MIR SINE MIR 34 240 -22 507 198 38 0 chr2 18188940 18189046 -235067537 + MER91C DNA MER1_type 1 110 -30 690 164 22 7 chr2 18189110 18189257 -235067326 - L1M4 LINE L1 -3942 3625 3476 2590 135 6 3 chr2 18189257 18189620 -235066963 - THE1B LTR MaLR 0 364 1 291 123 18 18 chr2 18189620 18189677 -235066906 - THE1B-int LTR MaLR 0 1580 1524 * 1074 89 19 0 chr2 18189672 18189830 -235066753 + THE1-int LTR MaLR 904 1064 -516 585 307 178 28 chr2 18191014 18191534 -235065049 - L2 LINE L2 -4 3309 2703 36 40 0 0 chr2 18191536 18191586 -235064997 + AT_rich Low_complexity Low_complexity 1 50 0 321 369 72 9 chr2 18191876 18192098 -235064485 - L2 LINE L2 -528 2786 2551 22 0 0 0 chr2 18192169 18192191 -235064392 + AT_rich Low_complexity Low_complexity 1 22 0 270 324 144 6 chr2 18192682 18192855 -235063728 + MIR SINE MIR 60 256 -6 5466 149 46 15 chr2 18193158 18194521 -235062062 + L1MA4 LINE L1 4887 6284 -16 237 210 92 59 chr2 18194573 18194692 -235061891 + MIR SINE MIR 20 142 -120 271 360 36 29 chr2 18195151 18195290 -235061293 - L2 LINE L2 -9 3263 3124 994 288 95 27 chr2 18195533 18195977 -235060606 - MLT1K LTR MaLR -21 567 94 2269 159 33 14 chr2 18196105 18196526 -235060057 + L1MA7 LINE L1 5859 6287 -4 207 267 17 17 chr2 18196938 18196998 -235059585 + L2 LINE L2 2667 2726 -588 210 322 78 11 chr2 18197140 18197230 -235059353 + L2 LINE L2 2965 3060 -212 292 296 121 30 chr2 18197659 18197791 -235058792 + MIR3 SINE MIR 3 146 -62 1301 291 59 67 chr2 18197841 18198618 -235057965 - L3 LINE CR1 0 1577 807 606 331 79 19 chr2 18198979 18199296 -235057287 - L3 LINE CR1 -758 819 484 185 339 17 0 chr2 18199323 18199382 -235057201 - L2 LINE L2 -39 3233 3174 261 295 11 32 chr2 18199536 18199631 -235056952 - L2 LINE L2 -215 3057 2965 1556 207 7 17 chr2 18201980 18202280 -235054303 - AluJo SINE Alu -15 297 1 187 318 186 34 chr2 18202797 18203184 -235053399 + L2 LINE L2 1981 2426 -888 198 0 0 0 chr2 18203273 18203295 -235053288 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 6905 58 21 5 chr2 18203295 18204681 -235051902 - L1PA6 LINE L1 -11 6143 4743 667 126 96 0 chr2 18204681 18204796 -235051787 + L1P LINE L1 2327 2458 -3688 324 0 0 0 chr2 18204796 18204832 -235051751 + (TA)n Simple_repeat Simple_repeat 1 36 0 667 126 96 0 chr2 18204832 18204851 -235051732 + L1P LINE L1 2458 2474 -3672 3351 130 19 4 chr2 18204951 18205474 -235051109 + THE1B-int LTR MaLR 1044 1574 -6 2022 137 76 15 chr2 18205479 18205822 -235050761 + THE1B LTR MaLR 1 364 0 607 292 74 25 chr2 18206061 18206414 -235050169 + MLT1K LTR MaLR 217 586 -2 400 153 318 0 chr2 18206659 18206744 -235049839 - FLAM_C SINE Alu -20 123 12 432 143 0 0 chr2 18206820 18206904 -235049679 + (TG)n Simple_repeat Simple_repeat 1 84 0 211 319 0 44 chr2 18206910 18207001 -235049582 + MIR SINE MIR 156 242 -20 189 0 0 0 chr2 18207177 18207198 -235049385 + (TA)n Simple_repeat Simple_repeat 1 21 0 200 280 0 0 chr2 18208475 18208525 -235048058 + GA-rich Low_complexity Low_complexity 3 52 0 189 270 0 0 chr2 18208619 18208708 -235047875 + GA-rich Low_complexity Low_complexity 3 91 0 2052 250 53 5 chr2 18208889 18209528 -235047055 - MST-int LTR MaLR -955 696 27 306 301 37 7 chr2 18209525 18209661 -235046922 + THE1-int LTR MaLR 466 605 -975 * 532 253 50 11 chr2 18209665 18209847 -235046736 - MSTA LTR MaLR -162 266 78 497 241 195 29 chr2 18209854 18210095 -235046488 + MST-int LTR MaLR 976 1256 -395 314 191 32 0 chr2 18210256 18210319 -235046264 - MSTA LTR MaLR -363 65 1 1181 213 30 42 chr2 18210319 18210652 -235045931 - MSTA-int LTR MaLR 0 1651 1323 280 267 109 0 chr2 18210657 18210758 -235045825 - MSTA LTR MaLR -257 171 60 394 237 21 0 chr2 18210807 18210904 -235045679 - MSTA LTR MaLR -329 99 1 3515 233 70 32 chr2 18210904 18211989 -235044594 - MSTA-int LTR MaLR 0 1651 526 34049 94 9 8 chr2 18212094 18217236 -235039347 - L1P LINE L1 -987 5159 11 209 257 20 20 chr2 18217599 18217700 -235038883 + (TA)n Simple_repeat Simple_repeat 2 102 0 702 214 41 38 chr2 18217887 18218154 -235038429 - L1MC4 LINE L1 0 8042 7775 21 57 0 0 chr2 18218567 18218602 -235037981 + AT_rich Low_complexity Low_complexity 1 35 0 264 299 0 0 chr2 18218926 18218993 -235037590 - HAL1 LINE L1 -611 1896 1830 326 331 103 38 chr2 18219036 18219220 -235037363 - HAL1 LINE L1 -752 1755 1560 232 277 124 29 chr2 18219277 18219519 -235037064 - HAL1 LINE L1 -1030 1477 1213 1158 265 135 32 chr2 18219521 18220046 -235036537 + MLT2E LTR ERVL 27 605 -23 182 349 64 18 chr2 18220720 18220829 -235035754 + L2 LINE L2 2733 2846 -468 196 389 80 18 chr2 18221096 18221209 -235035374 + L2 LINE L2 3136 3255 -17 2268 143 60 38 chr2 18221447 18221866 -235034717 - MSTC LTR MaLR 0 428 1 222 307 148 55 chr2 18222259 18222461 -235034122 - L2 LINE L2 0 3272 3052 374 261 152 7 chr2 18222692 18222830 -235033753 - MER5B DNA MER1_type -1 177 20 237 341 24 0 chr2 18222856 18222938 -235033645 - MIR3 SINE MIR -5 203 120 1723 169 129 33 chr2 18222966 18223060 -235033523 + MLT1C LTR MaLR 1 85 -382 2332 169 36 7 chr2 18223060 18223474 -235033109 - MSTA LTR MaLR -2 426 1 1723 169 129 33 chr2 18223474 18223805 -235032778 + MLT1C LTR MaLR 85 467 0 214 250 0 0 chr2 18224170 18224214 -235032369 + (TG)n Simple_repeat Simple_repeat 1 44 0 304 290 97 51 chr2 18224592 18224768 -235031815 - MIR3 SINE MIR -2 206 23 246 291 25 13 chr2 18224793 18224872 -235031711 + MIR SINE MIR 71 150 -112 1131 131 75 5 chr2 18224906 18225120 -235031463 - L1PB4 LINE L1 -258 5898 5670 223 255 0 0 chr2 18225493 18225544 -235031039 + GA-rich Low_complexity Low_complexity 1 51 0 184 358 49 0 chr2 18225715 18225796 -235030787 - MIR3 SINE MIR -19 189 105 923 180 26 11 chr2 18226117 18226306 -235030277 + MLT1D LTR MaLR 1 192 -313 2126 149 40 36 chr2 18226327 18226876 -235029707 - MLT2A2 LTR ERVL 0 554 1 868 220 105 29 chr2 18226882 18227159 -235029424 + MLT1D LTR MaLR 208 505 0 1834 87 0 0 chr2 18227897 18228126 -235028457 - AluSg SINE Alu -81 229 1 464 335 126 5 chr2 18228221 18228427 -235028156 + MIR SINE MIR 3 233 -29 404 293 24 24 chr2 18228559 18228682 -235027901 + L2 LINE L2 3149 3271 -1 233 152 22 0 chr2 18229051 18229097 -235027486 - L1M4 LINE L1 -2073 4073 4027 237 219 104 10 chr2 18229130 18229226 -235027357 - L1MDa LINE L1 -4787 1342 1238 518 319 90 18 chr2 18229234 18229513 -235027070 - L1MDa LINE L1 -4883 1236 938 450 323 132 25 chr2 18230746 18231065 -235025518 + L1ME4a LINE L1 5532 5884 -237 2063 108 30 7 chr2 18231080 18231377 -235025206 - AluSg SINE Alu -6 304 1 28 61 0 0 chr2 18231574 18231623 -235024960 + AT_rich Low_complexity Low_complexity 1 49 0 22 0 0 0 chr2 18232184 18232206 -235024377 + AT_rich Low_complexity Low_complexity 1 22 0 275 26 51 0 chr2 18232659 18232698 -235023885 + (GAAA)n Simple_repeat Simple_repeat 2 42 0 293 264 42 0 chr2 18233670 18233742 -235022841 + MIR SINE MIR 54 128 -134 1370 231 101 90 chr2 18235357 18236123 -235020460 - LTR41 LTR ERVL 0 767 3 217 277 188 0 chr2 18236425 18236526 -235020057 - MIR SINE MIR -11 251 132 578 304 6 0 chr2 18236596 18236754 -235019829 + MIR SINE MIR 70 228 -34 227 333 12 12 chr2 18236873 18236954 -235019629 - MIR SINE MIR -173 89 9 333 172 104 45 chr2 18237221 18237355 -235019228 + LTR19A LTR ERV1 342 483 -3 330 389 79 26 chr2 18238124 18238515 -235018068 - L2 LINE L2 -838 2476 2065 221 188 83 0 chr2 18238634 18238682 -235017901 - MER91C DNA MER1_type -35 105 54 183 250 0 0 chr2 18240044 18240076 -235016507 + MIR SINE MIR 33 64 -144 337 344 36 40 chr2 18241227 18241451 -235015132 - L2 LINE L2 -221 3051 2829 2086 314 121 34 chr2 18242241 18243770 -235012813 + L2 LINE L2 1286 2947 -367 314 264 23 23 chr2 18243923 18244010 -235012573 + L2 LINE L2 3221 3307 -6 442 253 0 10 chr2 18244029 18244128 -235012455 - MIR3 SINE MIR -24 184 87 403 369 39 39 chr2 18244594 18244903 -235011680 - L2 LINE L2 -472 2842 2534 280 305 54 29 chr2 18245449 18245688 -235010895 + L1ME LINE L1 5593 5837 -284 1517 135 87 8 chr2 18245696 18245962 -235010621 - MSTA LTR MaLR 0 428 142 878 222 18 114 chr2 18246098 18246441 -235010142 - L2 LINE L2 -1 3312 3003 247 159 130 43 chr2 18246567 18246636 -235009947 + MIR3 SINE MIR 111 185 -23 254 287 155 39 chr2 18246702 18246831 -235009752 - L2 LINE L2 0 3272 3129 207 336 58 19 chr2 18247498 18247602 -235008981 + L2 LINE L2 2987 3094 -178 213 284 14 27 chr2 18247720 18247789 -235008794 - MIR SINE MIR -65 143 76 935 215 11 0 chr2 18247789 18247975 -235008608 - MER5A DNA MER1_type -1 188 1 247 263 98 8 chr2 18248586 18248719 -235007864 - L1ME4a LINE L1 -11 6110 5966 240 122 0 0 chr2 18248758 18248799 -235007784 + (TA)n Simple_repeat Simple_repeat 2 42 0 452 299 102 0 chr2 18249025 18249167 -235007416 - L1ME4a LINE L1 -320 5801 5675 2408 43 7 4 chr2 18249167 18249448 -235007135 + AluY SINE Alu 27 308 -3 452 299 102 0 chr2 18249448 18249559 -235007024 - L1ME4a LINE L1 -446 5675 5522 1054 184 62 53 chr2 18250572 18250893 -235005690 - MER33 DNA MER1_type 0 324 1 790 257 32 5 chr2 18251236 18251454 -235005129 + MER58A DNA MER1_type 1 224 0 197 308 217 50 chr2 18252016 18252136 -235004447 + MIR3 SINE MIR 8 147 -61 680 218 170 0 chr2 18252214 18252379 -235004204 + MIR SINE MIR 41 233 -29 367 281 105 7 chr2 18252501 18252643 -235003940 - MIR SINE MIR -17 191 24 346 345 31 27 chr2 18252844 18253067 -235003516 + MLT1K LTR MaLR 2 225 -363 30973 101 12 57 chr2 18253753 18260192 -234996391 - L1PA7 LINE L1 -4 6150 12 1010 225 28 0 chr2 18260931 18261149 -234995434 - MER58A DNA MER1_type 0 224 1 2521 100 17 0 chr2 18261454 18261803 -234994780 + THE1A LTR MaLR 1 355 0 26 0 0 0 chr2 18261887 18261913 -234994670 + AT_rich Low_complexity Low_complexity 1 26 0 410 363 41 24 chr2 18261927 18262222 -234994361 - L2 LINE L2 -559 2755 2456 806 229 133 9 chr2 18262765 18262983 -234993600 + MIR SINE MIR 8 252 -10 257 61 0 0 chr2 18264145 18264178 -234992405 + U2 snRNA snRNA 1 33 -155 1816 182 3 0 chr2 18265993 18266289 -234990294 - AluJo SINE Alu -15 297 1 5763 112 13 0 chr2 18266687 18267610 -234988973 + L1PB1 LINE L1 5215 6147 -4 29 98 0 0 chr2 18267854 18267946 -234988637 + AT_rich Low_complexity Low_complexity 1 92 0 1977 99 19 75 chr2 18268789 18269055 -234987528 - L1MA3 LINE L1 0 6305 6064 2002 108 56 0 chr2 18269055 18269225 -234987358 - AluY SINE Alu -9 302 108 2207 54 0 4 chr2 18269225 18269484 -234987099 - AluY SINE Alu -6 305 48 2002 108 56 0 chr2 18269484 18269599 -234986984 - AluY SINE Alu -203 108 1 1977 99 19 75 chr2 18269599 18269705 -234986878 - L1MA3 LINE L1 -241 6064 5954 261 305 38 29 chr2 18269717 18269822 -234986761 - MIR SINE MIR -67 141 36 21 57 0 0 chr2 18270599 18270634 -234985949 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 18270766 18270787 -234985796 + AT_rich Low_complexity Low_complexity 1 21 0 336 244 126 31 chr2 18270846 18270973 -234985610 - L1MC/D LINE L1 -893 5466 5328 362 249 97 113 chr2 18272512 18272821 -234983762 + MLT1K LTR MaLR 271 574 -14 597 319 169 36 chr2 18272981 18273392 -234983191 + L2 LINE L2 2312 2802 -512 2172 116 3 3 chr2 18273392 18273685 -234982898 + AluSx SINE Alu 1 293 -19 597 319 169 36 chr2 18273685 18273771 -234982812 + L2 LINE L2 2802 2875 -439 325 315 42 24 chr2 18273942 18274107 -234982476 - MIR SINE MIR -48 214 47 5466 63 3 4 chr2 18275453 18276153 -234980430 - L1PA7 LINE L1 0 6154 5456 225 236 18 0 chr2 18276276 18276331 -234980252 + MIR SINE MIR 86 141 -121 211 346 224 0 chr2 18276356 18276463 -234980120 - L2 LINE L2 -8 3264 3134 583 240 56 0 chr2 18276516 18276641 -234979942 - MER91C DNA MER1_type -6 134 3 459 331 81 43 chr2 18277564 18278057 -234978526 + LTR33 LTR ERVL 8 519 -2 219 139 0 0 chr2 18279509 18279545 -234977038 + (T)n Simple_repeat Simple_repeat 1 36 0 288 371 112 20 chr2 18279967 18280164 -234976419 - L2 LINE L2 0 3272 3058 281 322 43 9 chr2 18280560 18280675 -234975908 + MIR3 SINE MIR 78 196 -12 181 270 124 22 chr2 18282811 18282900 -234973683 + MIR3 SINE MIR 11 108 -100 1538 186 19 31 chr2 18283100 18283460 -234973123 + MLT1A1 LTR MaLR 10 365 0 2325 104 18 47 chr2 18283844 18284230 -234972353 + THE1C LTR MaLR 1 375 0 312 279 205 26 chr2 18285000 18285229 -234971354 - L3 LINE CR1 -87 1490 1221 525 115 13 0 chr2 18285942 18286020 -234970563 + LTR8 LTR ERV1 613 691 0 206 229 43 0 chr2 18286068 18286138 -234970445 + (TA)n Simple_repeat Simple_repeat 2 74 0 183 347 94 41 chr2 18287059 18287229 -234969354 + L2 LINE L2 2884 3062 -210 1976 141 10 0 chr2 18287364 18287654 -234968929 - AluSx SINE Alu -19 293 1 186 333 62 0 chr2 18288145 18288226 -234968357 - L2 LINE L2 -33 3239 3154 279 157 0 0 chr2 18288264 18288315 -234968268 + (CA)n Simple_repeat Simple_repeat 2 52 0 272 309 99 31 chr2 18288797 18288959 -234967624 + MIR SINE MIR 34 206 -56 637 262 84 5 chr2 18289678 18289869 -234966714 + MIR SINE MIR 57 262 0 283 175 48 0 chr2 18290112 18290175 -234966408 - MIR SINE MIR -62 146 81 355 315 79 0 chr2 18290708 18290835 -234965748 - MIR3 SINE MIR -34 174 38 276 260 63 47 chr2 18291876 18292003 -234964580 - MIR SINE MIR -45 217 89 365 316 44 0 chr2 18293451 18293565 -234963018 + MIR SINE MIR 30 148 -60 247 299 28 47 chr2 18293639 18293746 -234962837 + L2 LINE L2 2955 3059 -213 2243 123 26 9 chr2 18293887 18294236 -234962347 + THE1A LTR MaLR 1 355 0 11769 98 3 0 chr2 18294236 18295811 -234960772 + THE1A-int LTR MaLR 1 1580 0 2072 109 40 3 chr2 18295813 18296142 -234960441 + THE1A LTR MaLR 15 355 0 209 190 190 52 chr2 18296147 18296205 -234960378 + L2 LINE L2 3200 3265 -7 183 186 0 0 chr2 18296246 18296289 -234960294 + (TGAA)n Simple_repeat Simple_repeat 1 43 0 28 0 0 0 chr2 18297128 18297156 -234959427 + AT_rich Low_complexity Low_complexity 1 28 0 2509 175 41 4 chr2 18297174 18297660 -234958923 - L1MC1 LINE L1 -6 6327 5824 443 118 13 0 chr2 18297660 18297736 -234958847 + (TCCC)n Simple_repeat Simple_repeat 1 77 0 1603 189 13 28 chr2 18297736 18298053 -234958530 - AluJo SINE Alu 0 312 1 5471 224 23 13 chr2 18298053 18300128 -234956455 - L1MC1 LINE L1 -507 5826 3729 182 395 13 13 chr2 18300443 18300519 -234956064 - MIR SINE MIR -182 80 5 1762 141 0 0 chr2 18300997 18301239 -234955344 - AluSx SINE Alu -70 242 1 578 363 12 12 chr2 18302915 18303166 -234953417 - MIR SINE MIR -1 261 11 196 365 56 28 chr2 18303472 18303579 -234953004 + MIR SINE MIR 1 110 -152 216 0 0 0 chr2 18304555 18304579 -234952004 + (T)n Simple_repeat Simple_repeat 1 24 0 22 56 0 0 chr2 18304646 18304682 -234951901 + AT_rich Low_complexity Low_complexity 1 36 0 261 83 0 0 chr2 18305190 18305226 -234951357 + (TTTTC)n Simple_repeat Simple_repeat 4 39 0 2268 112 0 3 chr2 18305240 18305552 -234951031 - AluSx SINE Alu -1 311 1 396 0 0 0 chr2 18307481 18307525 -234949058 + (CA)n Simple_repeat Simple_repeat 1 44 0 2134 106 7 20 chr2 18308045 18308347 -234948236 + AluSx SINE Alu 1 298 -14 2272 105 0 0 chr2 18308350 18308646 -234947937 + AluSx SINE Alu 1 296 -16 348 24 0 0 chr2 18308834 18308877 -234947706 + (TG)n Simple_repeat Simple_repeat 1 43 -388 1710 182 20 35 chr2 18308877 18309224 -234947359 - MER2 DNA MER2_type 0 344 3 348 24 0 0 chr2 18309224 18309265 -234947318 + (TG)n Simple_repeat Simple_repeat 2 42 0 219 146 0 0 chr2 18309405 18309446 -234947137 + (TC)n Simple_repeat Simple_repeat 2 42 0 241 188 12 141 chr2 18309447 18309532 -234947051 - L1MEd LINE L1 -6042 77 4 408 329 66 28 chr2 18309755 18309968 -234946615 + MIR SINE MIR 22 242 -20 21 36 0 0 chr2 18310688 18310716 -234945867 + AT_rich Low_complexity Low_complexity 1 28 0 255 95 238 48 chr2 18311166 18311229 -234945354 - MADE1 DNA Mariner -3 77 3 180 289 92 13 chr2 18311405 18311481 -234945102 - L2 LINE L2 -563 2751 2670 2021 223 66 36 chr2 18313720 18314356 -234942227 + L1MC4 LINE L1 6783 7437 -605 344 322 91 83 chr2 18314452 18314825 -234941758 + L2 LINE L2 2894 3269 -3 666 241 47 11 chr2 18314929 18315120 -234941463 - MER3 DNA MER1_type -1 208 11 1774 176 27 44 chr2 18315123 18315301 -234941282 - L1M4 LINE L1 -432 5752 5573 2558 75 0 0 chr2 18315301 18315609 -234940974 - AluY SINE Alu -3 308 1 1774 176 27 44 chr2 18315609 18316023 -234940560 - L1M4 LINE L1 -611 5573 5172 22 0 0 0 chr2 18316033 18316055 -234940528 + AT_rich Low_complexity Low_complexity 1 22 0 4848 128 31 56 chr2 18316442 18317134 -234939449 - L1PA15 LINE L1 -4 6161 5453 2072 143 27 19 chr2 18317134 18317504 -234939079 + THE1C LTR MaLR 1 373 -2 9681 116 33 42 chr2 18317508 18319100 -234937483 + THE1C-int LTR MaLR 3 1580 0 1878 164 19 32 chr2 18319100 18319478 -234937105 + THE1C LTR MaLR 1 373 -2 4848 128 31 56 chr2 18319478 18319679 -234936904 - L1PA15 LINE L1 -714 5451 5246 2117 127 6 19 chr2 18319679 18319995 -234936588 - AluSx SINE Alu 0 312 1 2189 120 3 0 chr2 18319999 18320290 -234936293 - AluSx SINE Alu -20 292 1 4848 128 31 56 chr2 18320290 18321179 -234935404 - L1PA15 LINE L1 -922 5243 4132 1813 165 7 0 chr2 18321179 18321452 -234935131 + AluSx SINE Alu 1 275 -37 4848 128 31 56 chr2 18321452 18321596 -234934987 - L1PA15 LINE L1 -2033 4132 3986 4084 216 26 18 chr2 18321591 18322686 -234933897 + L1PA15 LINE L1 2914 4017 -2129 * 21 0 0 0 chr2 18322776 18322797 -234933786 + AT_rich Low_complexity Low_complexity 1 21 0 271 373 57 6 chr2 18323275 18323433 -234933150 - MIR SINE MIR 0 262 97 983 281 56 20 chr2 18325007 18325402 -234931181 + MLT1I LTR MaLR 1 409 0 229 340 68 19 chr2 18325750 18325853 -234930730 + L2 LINE L2 3157 3264 -8 237 117 50 0 chr2 18326022 18326082 -234930501 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 266 257 92 0 chr2 18326241 18326350 -234930233 - HAL1 LINE L1 -146 2361 2243 373 279 66 47 chr2 18326395 18326616 -234929967 - HAL1b LINE L1 -129 2378 746 647 270 118 48 chr2 18326938 18327401 -234929182 - HAL1 LINE L1 -710 1797 1293 2300 114 0 0 chr2 18327401 18327709 -234928874 - AluSg SINE Alu -2 308 1 647 270 118 48 chr2 18327709 18327764 -234928819 - HAL1 LINE L1 -1214 1293 1243 2228 118 0 6 chr2 18327799 18328113 -234928470 - AluSx SINE Alu 0 312 1 21 0 0 0 chr2 18328252 18328273 -234928310 + AT_rich Low_complexity Low_complexity 1 21 0 401 340 20 0 chr2 18328535 18328682 -234927901 + LTR16A LTR ERVL 201 350 -100 180 359 23 31 chr2 18329456 18329584 -234926999 - L2 LINE L2 -14 3299 3173 774 259 92 0 chr2 18329652 18329880 -234926703 - MIR SINE MIR -13 249 1 22 70 0 0 chr2 18330153 18330196 -234926387 + AT_rich Low_complexity Low_complexity 1 43 0 364 312 63 28 chr2 18330302 18330619 -234925964 + L1ME LINE L1 5493 5820 -350 188 241 114 13 chr2 18330971 18331050 -234925533 - L2 LINE L2 -260 3012 2926 545 287 54 0 chr2 18331205 18331334 -234925249 - L2 LINE L2 0 3272 3137 252 0 0 0 chr2 18331784 18331812 -234924771 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2005 116 22 4 chr2 18331813 18332089 -234924494 - AluSq SINE Alu -32 281 1 1827 118 28 42 chr2 18332460 18332747 -234923836 - AluSc SINE Alu -3 306 24 469 324 29 29 chr2 18333266 18333507 -234923076 - L2 LINE L2 0 3313 3073 1164 265 124 12 chr2 18333601 18334028 -234922555 + MLT1E LTR MaLR 101 575 -18 2052 140 45 24 chr2 18334195 18334573 -234922010 + MSTA LTR MaLR 1 386 -42 651 88 0 0 chr2 18334588 18334679 -234921904 + (TTCC)n Simple_repeat Simple_repeat 3 93 0 2132 124 13 3 chr2 18334681 18334987 -234921596 - AluSg SINE Alu -1 309 1 291 98 0 0 chr2 18334987 18335028 -234921555 + MSTA LTR MaLR 388 428 0 246 100 0 0 chr2 18335865 18335905 -234920678 + L1ME LINE L1 5311 5350 -1009 244 324 55 36 chr2 18335969 18336244 -234920339 + L1ME LINE L1 5452 5731 -390 228 272 12 37 chr2 18336244 18336325 -234920258 - MLT1F LTR MaLR -413 129 51 21 36 0 0 chr2 18336919 18336947 -234919636 + AT_rich Low_complexity Low_complexity 1 28 0 190 278 167 40 chr2 18337369 18337495 -234919088 - MER5B DNA MER1_type 0 178 37 676 133 19 0 chr2 18338887 18338992 -234917591 + AluY SINE Alu 173 279 -32 381 109 0 0 chr2 18338992 18339056 -234917527 + (TAAA)n Simple_repeat Simple_repeat 1 64 0 679 300 76 17 chr2 18339320 18339557 -234917026 + MIR SINE MIR 2 252 -10 494 243 20 64 chr2 18339589 18339791 -234916792 + LTR65 LTR ERV1 1 193 -476 2178 182 14 43 chr2 18339816 18340255 -234916328 - MSTB LTR MaLR 0 426 1 651 217 66 50 chr2 18341509 18341707 -234914876 + MER3 DNA MER1_type 9 209 0 1524 150 62 91 chr2 18342988 18343374 -234913209 - THE1C LTR MaLR 0 375 1 514 238 76 39 chr2 18343625 18343975 -234912608 - MER52A LTR ERV1 -32 753 334 334 173 49 0 chr2 18344227 18344308 -234912275 - MER61E LTR ERV1 -484 85 1 36 53 0 0 chr2 18344320 18344377 -234912206 + AT_rich Low_complexity Low_complexity 1 57 0 211 226 12 83 chr2 18344470 18344509 -234912074 + CT-rich Low_complexity Low_complexity 2 42 -37 2043 168 34 14 chr2 18344509 18344866 -234911717 + THE1B LTR MaLR 1 364 0 11767 91 4 4 chr2 18344867 18346446 -234910137 + THE1B-int LTR MaLR 2 1580 0 2064 171 34 14 chr2 18346446 18346803 -234909780 + THE1B LTR MaLR 1 364 0 211 226 12 83 chr2 18346803 18346844 -234909739 + CT-rich Low_complexity Low_complexity 40 79 0 804 160 0 15 chr2 18347756 18347887 -234908696 + FLAM_C SINE Alu 1 129 -4 442 181 67 9 chr2 18348245 18348350 -234908233 - Tigger6 DNA MER2_type -95 1502 1392 2281 171 14 0 chr2 18348357 18348790 -234907793 - L1MB7 LINE L1 0 6184 5746 244 154 31 31 chr2 18350026 18350091 -234906492 - LTR37B LTR ERV1 -250 218 154 655 204 34 116 chr2 18350107 18350385 -234906198 + MER31-int LTR ERV1 3841 5398 -881 1205 228 56 60 chr2 18350573 18351038 -234905545 + LTR37B LTR ERV1 6 468 0 280 319 66 60 chr2 18351969 18352151 -234904432 - MER5A DNA MER1_type -6 183 1 286 353 52 44 chr2 18351980 18352116 -234904467 + MER5B DNA MER1_type 18 154 -24 2165 89 3 14 chr2 18352151 18352442 -234904141 + AluY SINE Alu 1 288 -23 317 282 89 0 chr2 18352853 18352977 -234903606 + L2 LINE L2 3138 3272 0 1661 153 7 29 chr2 18353047 18353328 -234903255 - AluSx SINE Alu -37 275 1 22 0 0 0 chr2 18353413 18353435 -234903148 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 18354733 18354754 -234901829 + AT_rich Low_complexity Low_complexity 1 21 0 877 147 0 7 chr2 18354920 18355056 -234901527 + AluJo SINE Alu 1 135 -177 707 321 30 28 chr2 18356962 18357288 -234899295 - MLT1G LTR MaLR -303 288 1 484 258 8 16 chr2 18357994 18358118 -234898465 - L2 LINE L2 -2 3311 3189 2134 154 66 33 chr2 18358120 18358659 -234897924 - MLT2A2 LTR ERVL 0 554 1 189 244 259 8 chr2 18358660 18358791 -234897792 - L2 LINE L2 -142 3171 3008 255 61 0 0 chr2 18358920 18358953 -234897630 + (TG)n Simple_repeat Simple_repeat 2 34 0 1597 203 4 4 chr2 18358953 18359229 -234897354 - AluJo SINE Alu -34 278 3 1427 182 14 47 chr2 18359298 18359595 -234896988 + AluJo SINE Alu 1 287 -25 368 260 5 10 chr2 18359831 18359930 -234896653 + MIR SINE MIR 66 169 -39 600 189 0 0 chr2 18360533 18360644 -234895939 + FLAM_C SINE Alu 1 111 -32 234 0 0 0 chr2 18360655 18360681 -234895902 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 274 361 0 0 chr2 18361318 18361401 -234895182 - MIR SINE MIR -88 120 38 378 0 0 0 chr2 18362038 18362080 -234894503 + (CA)n Simple_repeat Simple_repeat 2 43 0 3391 130 50 20 chr2 18362080 18362680 -234893903 + HSMAR2 DNA Mariner 2 619 -683 403 186 0 23 chr2 18362681 18362767 -234893816 - MER52A LTR ERV1 0 1755 1672 * 3244 198 199 31 chr2 18362745 18363731 -234892852 - MER52A LTR ERV1 -559 1196 46 4134 147 28 6 chr2 18363984 18364656 -234891927 + HSMAR2 DNA Mariner 615 1301 -1 2459 187 37 9 chr2 18364656 18365116 -234891467 - MLT2B2 LTR ERVL -42 473 1 906 210 78 45 chr2 18365429 18365830 -234890753 - L1MDa LINE L1 -3934 2195 1797 387 154 0 15 chr2 18365839 18365904 -234890679 + MLT1B LTR MaLR 1 64 -310 1076 190 26 0 chr2 18365910 18366136 -234890447 + Tigger2 DNA MER2_type 1 232 -2486 * 1867 186 30 8 chr2 18366135 18366496 -234890087 + Tigger2 DNA MER2_type 2349 2717 -1 1007 231 28 69 chr2 18366496 18366814 -234889769 + MLT1B LTR MaLR 75 379 -11 1880 213 43 47 chr2 18366831 18366904 -234889679 - L1MDa LINE L1 -4377 1752 1680 1886 147 55 33 chr2 18366904 18367271 -234889312 - THE1C LTR MaLR 0 375 1 1880 213 43 47 chr2 18367271 18367799 -234888784 - L1MDa LINE L1 -4449 1680 1153 21 0 0 0 chr2 18367922 18367943 -234888640 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 18369044 18369065 -234887518 + AT_rich Low_complexity Low_complexity 1 21 0 282 281 49 12 chr2 18369923 18370005 -234886578 + MIR SINE MIR 88 172 -90 21 57 0 0 chr2 18370743 18370778 -234885805 + AT_rich Low_complexity Low_complexity 1 35 0 239 154 31 15 chr2 18370916 18370981 -234885602 + (TA)n Simple_repeat Simple_repeat 1 66 0 2646 105 6 0 chr2 18371066 18371427 -234885156 - THE1B LTR MaLR 0 364 2 2143 115 7 0 chr2 18371668 18371956 -234884627 - AluY SINE Alu -21 290 1 185 333 95 9 chr2 18372014 18372119 -234884464 - MIR SINE MIR 0 262 149 515 259 18 35 chr2 18372210 18372380 -234884203 - MIR3 SINE MIR -24 184 18 532 305 97 35 chr2 18373155 18373608 -234882975 - L1MDa LINE L1 -5044 1075 595 181 250 179 45 chr2 18373944 18374056 -234882527 + MIR SINE MIR 136 262 0 2148 67 0 11 chr2 18374651 18374920 -234881663 + AluY SINE Alu 28 293 -18 475 277 29 7 chr2 18375138 18375275 -234881308 + MER69B DNA AcHobo 2 141 -1085 2238 117 10 0 chr2 18375281 18375590 -234880993 + AluSx SINE Alu 1 312 0 374 249 94 12 chr2 18375616 18375805 -234880778 - MER69B DNA AcHobo -256 970 766 * 2647 260 106 18 chr2 18375795 18376276 -234880307 + MER69B DNA AcHobo 152 589 -1937 7025 75 10 7 chr2 18376276 18377994 -234878589 + L1PA7 LINE L1 4429 6154 0 2647 260 106 18 chr2 18377994 18378492 -234878091 + MER69B DNA AcHobo 589 1226 0 1319 182 33 28 chr2 18379659 18380022 -234876561 - MER31A LTR ERV1 0 485 8 294 95 0 0 chr2 18380640 18380682 -234875901 + (GA)n Simple_repeat Simple_repeat 1 42 0 3847 218 45 18 chr2 18382160 18382978 -234873605 - MER21B LTR ERV1 -9 854 15 26 30 0 0 chr2 18383120 18383153 -234873430 + AT_rich Low_complexity Low_complexity 1 33 0 242 278 122 42 chr2 18383952 18384094 -234872489 + MIR SINE MIR 37 181 -69 320 258 94 30 chr2 18384596 18384696 -234871887 - MIR SINE MIR -86 122 39 209 108 27 0 chr2 18385702 18385739 -234870844 + (TATG)n Simple_repeat Simple_repeat 4 41 0 398 133 49 42 chr2 18385750 18386016 -234870567 + (TA)n Simple_repeat Simple_repeat 1 268 0 305 99 0 104 chr2 18386044 18386226 -234870357 + (TA)n Simple_repeat Simple_repeat 1 163 0 344 112 0 96 chr2 18386292 18386489 -234870094 + (TA)n Simple_repeat Simple_repeat 1 178 0 486 119 62 45 chr2 18386491 18386668 -234869915 + (CTATA)n Simple_repeat Simple_repeat 1 180 0 466 75 104 8 chr2 18386668 18386802 -234869781 + (TTATA)n Simple_repeat Simple_repeat 3 149 0 557 116 11 63 chr2 18386902 18387092 -234869491 + (TA)n Simple_repeat Simple_repeat 1 180 0 249 303 148 45 chr2 18388166 18388321 -234868262 + L3 LINE CR1 1274 1444 -133 200 159 0 23 chr2 18388738 18388782 -234867801 + (TA)n Simple_repeat Simple_repeat 1 43 0 1664 196 0 13 chr2 18389142 18389443 -234867140 - AluJo SINE Alu -15 297 1 229 385 11 0 chr2 18391216 18391307 -234865276 - MIR SINE MIR -87 121 30 38 75 0 0 chr2 18393049 18393129 -234863454 + AT_rich Low_complexity Low_complexity 1 80 0 320 213 193 100 chr2 18393846 18394085 -234862498 + L3 LINE CR1 1191 1451 -126 248 328 49 86 chr2 18395482 18395808 -234860775 - L2 LINE L2 -52 3220 2907 246 289 159 50 chr2 18396026 18396265 -234860318 - L2 LINE L2 -739 2575 2311 5333 159 57 20 chr2 18396313 18396397 -234860186 - L1MC1 LINE L1 -11 6322 6243 2197 117 47 33 chr2 18396397 18396756 -234859827 + THE1B LTR MaLR 1 364 0 5333 159 57 20 chr2 18396756 18397768 -234858815 - L1MC1 LINE L1 -90 6243 5186 2562 168 37 63 chr2 18397831 18398432 -234858151 - L1MD3 LINE L1 -8 7987 7403 332 185 46 0 chr2 18398434 18398499 -234858084 - MLT1F1 LTR MaLR -445 122 55 2204 145 80 10 chr2 18398764 18399164 -234857419 + MSTA LTR MaLR 1 428 0 324 379 86 0 chr2 18401758 18401898 -234854685 - L2 LINE L2 -5 3267 3116 217 321 73 9 chr2 18402100 18402209 -234854374 - MIR SINE MIR -122 140 25 300 242 95 0 chr2 18402914 18403009 -234853574 + MIR SINE MIR 76 179 -83 7085 40 24 0 chr2 18403742 18405205 -234851378 + L1PA5 LINE L1 4668 6151 -3 201 417 52 0 chr2 18405264 18405379 -234851204 - L2 LINE L2 -460 2854 2734 623 299 42 17 chr2 18405474 18405715 -234850868 + MIR SINE MIR 12 258 -4 265 429 40 0 chr2 18405863 18405989 -234850594 - L2 LINE L2 -176 3096 2966 2039 130 10 0 chr2 18407568 18407869 -234848714 + AluY SINE Alu 1 304 -7 449 254 129 26 chr2 18407873 18408066 -234848517 + MIR SINE MIR 49 261 -1 323 317 122 44 chr2 18409015 18409286 -234847297 - L2 LINE L2 -63 3209 2918 369 269 147 61 chr2 18409698 18410044 -234846539 - L2 LINE L2 -908 2406 2031 246 62 0 0 chr2 18410512 18410544 -234846039 + (TG)n Simple_repeat Simple_repeat 1 32 0 2634 33 3 0 chr2 18411320 18411625 -234844958 + AluY SINE Alu 1 306 -5 30 27 0 0 chr2 18411676 18411713 -234844870 + AT_rich Low_complexity Low_complexity 1 37 0 353 274 189 13 chr2 18412168 18412321 -234844262 + MIR SINE MIR 24 203 -59 385 261 15 8 chr2 18416262 18416396 -234840187 + (TAG)n Simple_repeat Simple_repeat 1 135 0 396 330 55 61 chr2 18416512 18416987 -234839596 - MLT1K LTR MaLR -25 563 92 1811 194 59 14 chr2 18417588 18418026 -234838557 - L1MB5 LINE L1 0 6174 5717 446 246 106 0 chr2 18418328 18418470 -234838113 - MIR SINE MIR -56 206 50 1868 244 69 52 chr2 18418475 18419054 -234837529 + MLT1E LTR MaLR 2 590 -3 580 253 49 8 chr2 18419057 18419346 -234837237 + MLT1E-int LTR MaLR 1 451 -920 1697 197 0 3 chr2 18419349 18419643 -234836940 - AluJo SINE Alu -19 293 1 2917 188 32 140 chr2 18419646 18420700 -234835883 - MER52A LTR ERV1 -452 1303 379 2387 186 10 0 chr2 18421003 18421503 -234835080 + L1P LINE L1 4773 5277 -869 575 203 68 17 chr2 18421508 18421685 -234834898 - L1MB5 LINE L1 -821 5325 5140 751 298 52 22 chr2 18421691 18422053 -234834530 - L1MEc LINE L1 -5997 399 27 187 375 0 0 chr2 18422787 18422835 -234833748 + L2 LINE L2 3242 3289 -24 488 308 102 84 chr2 18423024 18423358 -234833225 + L2 LINE L2 2932 3271 -1 231 114 0 0 chr2 18426445 18426480 -234830103 + (ATG)n Simple_repeat Simple_repeat 2 36 0 382 337 35 43 chr2 18426480 18426735 -234829848 - MIR SINE MIR -6 256 4 21 0 0 0 chr2 18426939 18426960 -234829623 + AT_rich Low_complexity Low_complexity 1 21 0 306 329 49 53 chr2 18427090 18427315 -234829268 + L1MC4a LINE L1 5703 5926 -1882 210 91 0 0 chr2 18428606 18428639 -234827944 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 254 364 102 0 chr2 18428681 18428799 -234827784 - MIR SINE MIR -61 147 18 200 347 0 0 chr2 18428859 18428908 -234827675 - L2 LINE L2 -23 3290 3242 416 229 65 90 chr2 18429512 18429783 -234826800 + L1MDa LINE L1 2453 2711 -3829 347 200 15 0 chr2 18429874 18429939 -234826644 + Tigger3(Golem) DNA MER2_type 15 80 -2949 3989 128 44 19 chr2 18429941 18430690 -234825893 + Tigger3(Golem) DNA MER2_type 2261 3028 -1 385 290 83 19 chr2 18430834 18431049 -234825534 + L1MDa LINE L1 2975 3175 -3365 4138 80 11 0 chr2 18431049 18431596 -234824987 + MER41A LTR ERV1 2 554 0 385 290 83 19 chr2 18431596 18432010 -234824573 + L1MDa LINE L1 3175 3643 -2897 3045 64 5 0 chr2 18432154 18432545 -234824038 - L1PA5 LINE L1 0 6154 5762 418 134 0 0 chr2 18432548 18432615 -234823968 - L1PA11 LINE L1 -12 6162 6096 595 347 60 24 chr2 18432777 18433160 -234823423 + L1MDa LINE L1 3938 4334 -2206 739 277 146 9 chr2 18433808 18434151 -234822432 - LTR16A LTR ERVL -43 407 18 229 325 102 37 chr2 18434163 18434409 -234822174 - L2 LINE L2 -804 2510 2249 591 309 64 27 chr2 18434464 18434652 -234821931 - MER91A DNA MER1_type -1 195 1 221 329 95 37 chr2 18434655 18434950 -234821633 - L2 LINE L2 -1095 2219 1908 491 267 102 26 chr2 18435161 18435402 -234821181 - MIR SINE MIR 0 262 3 200 29 114 0 chr2 18435504 18435539 -234821044 + (TTTAA)n Simple_repeat Simple_repeat 2 40 0 407 271 48 60 chr2 18436338 18436607 -234819976 + L1MC4a LINE L1 5888 6153 -1655 * 1809 240 96 1 chr2 18436599 18437287 -234819296 - L1M4 LINE L1 -3112 3034 2282 434 218 10 59 chr2 18437591 18437692 -234818891 - L2 LINE L2 -24 3289 3194 384 298 149 6 chr2 18437815 18437996 -234818587 - MIR SINE MIR 0 262 56 597 134 0 0 chr2 18438334 18438431 -234818152 + L1PB1 LINE L1 6047 6143 -8 2676 97 23 0 chr2 18438773 18439164 -234817419 - L1PA13 LINE L1 0 6163 5764 282 373 180 8 chr2 18439511 18439755 -234816828 - L2 LINE L2 -20 3252 2967 434 258 58 53 chr2 18439897 18439946 -234816637 - L1M4 LINE L1 -1662 4484 4437 900 106 8 0 chr2 18439946 18440078 -234816505 - L1PA7 LINE L1 -3 6151 6019 434 258 58 53 chr2 18440078 18440408 -234816175 - L1M4 LINE L1 -1709 4437 4103 230 271 45 77 chr2 18440639 18440678 -234815905 - HAL1b LINE L1 -768 580 541 2305 103 0 0 chr2 18440678 18440978 -234815605 + AluSx SINE Alu 1 300 -12 230 271 45 77 chr2 18440978 18441093 -234815490 - HAL1b LINE L1 -807 541 431 334 301 11 0 chr2 18441405 18441498 -234815085 - L1MC4 LINE L1 -1318 6724 6631 434 236 16 47 chr2 18441667 18441794 -234814789 - LTR67 LTR ERVL -30 527 405 1686 300 173 15 chr2 18442851 18443846 -234812737 + L2 LINE L2 1985 3138 -175 257 321 86 68 chr2 18444123 18444518 -234812065 + L2 LINE L2 2560 2961 -353 228 333 0 24 chr2 18444544 18444628 -234811955 + L2 LINE L2 2972 3053 -219 201 147 0 0 chr2 18444660 18444694 -234811889 + (GA)n Simple_repeat Simple_repeat 1 34 0 272 213 9 65 chr2 18444710 18444818 -234811765 + A-rich Low_complexity Low_complexity 4 105 0 219 254 227 9 chr2 18444914 18445024 -234811559 + L2 LINE L2 3139 3272 0 205 256 22 139 chr2 18445036 18445173 -234811410 - L2 LINE L2 -176 3096 2976 586 302 36 9 chr2 18445222 18445444 -234811139 - MIR SINE MIR -14 248 21 469 310 35 23 chr2 18446414 18446585 -234809998 + MIR SINE MIR 20 192 -70 189 0 0 0 chr2 18446620 18446641 -234809942 + (TC)n Simple_repeat Simple_repeat 2 22 0 2196 130 0 0 chr2 18446656 18446949 -234809634 - AluSx SINE Alu -19 293 1 462 279 8 8 chr2 18448353 18448475 -234808108 + MIR SINE MIR 15 136 -126 186 43 0 0 chr2 18449222 18449245 -234807338 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 229 293 37 0 chr2 18449335 18449417 -234807166 - L2 LINE L2 0 3313 3229 305 371 40 0 chr2 18449509 18449633 -234806950 - MIR SINE MIR -26 236 108 368 325 65 46 chr2 18449875 18450244 -234806339 - L2 LINE L2 -428 2886 2511 206 310 23 69 chr2 18451054 18451141 -234805442 + L2 LINE L2 3198 3280 -33 1373 156 30 7 chr2 18452021 18452291 -234804292 + L1MA4A LINE L1 5982 6257 -46 2505 132 63 89 chr2 18452291 18452906 -234803677 - LTR1 LTR ERV1 0 785 187 1282 159 8 4 chr2 18452887 18453126 -234803457 - LTR1 LTR ERV1 -534 251 12 * 329 91 0 0 chr2 18453133 18453188 -234803395 + L1MA4A LINE L1 6248 6302 -1 1713 205 5 30 chr2 18453675 18454045 -234802538 + MLT1A1 LTR MaLR 1 361 -4 1153 283 54 13 chr2 18454051 18454600 -234801983 - L1MCa LINE L1 -4352 2255 1493 201 197 0 0 chr2 18455233 18455294 -234801289 + T-rich Low_complexity Low_complexity 1 61 0 181 339 81 0 chr2 18455555 18455617 -234800966 + L2 LINE L2 3168 3234 -38 222 156 0 0 chr2 18456512 18456557 -234800026 + (TCTCTG)n Simple_repeat Simple_repeat 2 46 0 693 189 20 0 chr2 18456768 18456916 -234799667 + L1MA10 LINE L1 6175 6325 -9 1380 226 20 10 chr2 18458501 18458807 -234797776 + MER47B DNA MER2_type 7 315 -103 947 249 0 0 chr2 18458901 18459110 -234797473 - MER2 DNA MER2_type -135 210 2 453 204 0 0 chr2 18459111 18459199 -234797384 + MER47B DNA MER2_type 331 418 0 1810 261 55 17 chr2 18459199 18460069 -234796514 + L1MEc LINE L1 1415 2317 -4079 3879 207 113 126 chr2 18460073 18461210 -234795373 + L1MEc LINE L1 -191 958 -5257 8010 125 11 28 chr2 18461210 18462532 -234794051 + HSMAR2 DNA Mariner 2 1301 -1 3879 207 113 126 chr2 18462532 18463126 -234793457 + L1MEc LINE L1 958 1510 -4705 2344 77 0 7 chr2 18463126 18463426 -234793157 - AluY SINE Alu -13 298 1 3879 207 113 126 chr2 18463426 18463914 -234792669 + L1MEc LINE L1 1510 2002 -4213 293 283 117 8 chr2 18463914 18464034 -234792549 + MLT1J LTR MaLR 334 466 -45 698 200 19 0 chr2 18464034 18464189 -234792394 - L1MB1 LINE L1 0 6168 6011 373 316 64 28 chr2 18464262 18464686 -234791897 + L1MEc LINE L1 3495 3933 -2282 1224 264 161 14 chr2 18464687 18465207 -234791376 - MLT1E2 LTR MaLR 0 626 30 428 291 47 17 chr2 18465353 18465587 -234790996 + L1MEc LINE L1 4087 4327 -1888 22 56 0 0 chr2 18465595 18465631 -234790952 + AT_rich Low_complexity Low_complexity 1 36 0 725 349 60 17 chr2 18466644 18467072 -234789511 - LTR16A LTR ERVL -7 443 4 502 228 2 23 chr2 18467411 18467544 -234789039 + MIR SINE MIR 59 185 -71 229 323 8 24 chr2 18467614 18467729 -234788854 + (TATATG)n Simple_repeat Simple_repeat 2 116 -10 905 227 27 32 chr2 18467729 18467949 -234788634 + MER20 DNA MER1_type 1 219 0 229 323 8 24 chr2 18467949 18467960 -234788623 + (TATATG)n Simple_repeat Simple_repeat 116 126 0 1933 108 11 126 chr2 18467980 18468361 -234788222 + MER1B DNA MER1_type 1 337 0 183 42 0 0 chr2 18468403 18468427 -234788156 + (A)n Simple_repeat Simple_repeat 1 24 0 522 316 106 43 chr2 18468840 18469537 -234787046 + L1MCa LINE L1 2 791 -5328 229 239 83 83 chr2 18469860 18470078 -234786505 + L1MCa LINE L1 793 1010 -5109 342 286 46 14 chr2 18470268 18470485 -234786098 + L1MCa LINE L1 2111 2334 -3795 642 316 30 27 chr2 18470491 18470931 -234785652 + L1MEc LINE L1 37 477 -5919 1619 274 97 13 chr2 18470999 18471856 -234784727 + L1MEc LINE L1 2626 3554 -2661 276 200 17 0 chr2 18472000 18472060 -234784523 - L1ME LINE L1 -528 5593 5533 30 0 0 0 chr2 18472300 18472330 -234784253 + AT_rich Low_complexity Low_complexity 1 30 0 180 111 0 0 chr2 18472343 18472370 -234784213 + (TG)n Simple_repeat Simple_repeat 1 27 0 297 313 159 30 chr2 18472896 18473129 -234783454 + L2 LINE L2 3010 3272 0 1205 173 195 12 chr2 18473207 18473530 -234783053 + MLT1B LTR MaLR 8 389 -1 212 298 0 0 chr2 18473655 18473702 -234782881 + MIR SINE MIR 99 145 -63 2097 138 75 0 chr2 18473968 18474344 -234782239 + L1PA16 LINE L1 5759 6162 -4 2698 171 3 91 chr2 18474812 18475419 -234781164 + MLT2B3 LTR ERVL 1 554 0 224 0 0 61 chr2 18476328 18476361 -234780222 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 367 297 149 7 chr2 18476437 18476585 -234779998 + MIR SINE MIR 50 218 -44 787 169 58 9 chr2 18476768 18476993 -234779590 + MER113 DNA MER1_type? 8 243 -278 27 29 0 0 chr2 18477241 18477275 -234779308 + AT_rich Low_complexity Low_complexity 1 34 0 1925 161 6 3 chr2 18477818 18478129 -234778454 + AluSx SINE Alu 1 312 0 323 237 11 21 chr2 18480247 18480340 -234776243 - L2 LINE L2 0 3313 3222 8270 157 14 3 chr2 18480401 18481009 -234775574 + L1PA13 LINE L1 3836 4436 -1727 2466 11 60 0 chr2 18481009 18481293 -234775290 - AluY SINE Alu -10 301 1 8270 157 14 3 chr2 18481293 18483005 -234773578 + L1PA13 LINE L1 4436 6161 -2 647 237 73 6 chr2 18483243 18483420 -234773163 + MER5A DNA MER1_type 1 189 0 415 290 49 38 chr2 18484461 18484644 -234771939 + MIR SINE MIR 59 243 -19 860 292 109 5 chr2 18484644 18485028 -234771555 + MLT1J2 LTR MaLR 3 426 -24 1046 219 30 0 chr2 18485033 18485234 -234771349 + MER63A DNA MER1_type 1 207 -3 1214 234 8 14 chr2 18485545 18485908 -234770675 + L1 LINE L1 4299 4659 -1487 * 2812 187 44 16 chr2 18485884 18486552 -234770031 - L1M1 LINE L1 -743 5403 4778 378 0 0 0 chr2 18486552 18486594 -234769989 + (TG)n Simple_repeat Simple_repeat 2 43 0 2812 187 44 16 chr2 18486594 18486694 -234769889 - L1M1 LINE L1 -1368 4778 4682 3977 145 35 4 chr2 18486694 18487416 -234769167 + L1MA4 LINE L1 5557 6300 0 262 119 34 0 chr2 18487421 18487480 -234769103 + L1MB4 LINE L1 6120 6180 0 351 0 0 0 chr2 18488057 18488096 -234768487 + (TA)n Simple_repeat Simple_repeat 1 39 0 392 213 42 75 chr2 18488397 18488693 -234767890 + MLT1H LTR MaLR 216 549 0 38 22 0 0 chr2 18489200 18489245 -234767338 + AT_rich Low_complexity Low_complexity 1 45 0 337 197 53 0 chr2 18489741 18489817 -234766766 - MLT1J2 LTR MaLR -370 80 1 183 80 0 0 chr2 18490331 18490356 -234766227 + (TG)n Simple_repeat Simple_repeat 2 26 0 309 365 47 0 chr2 18490430 18490537 -234766046 - L2 LINE L2 -20 3252 3141 2225 168 5 15 chr2 18490984 18491378 -234765205 - MLT1B LTR MaLR 0 390 1 459 261 103 18 chr2 18491493 18491757 -234764826 - L2 LINE L2 -544 2770 2437 293 266 32 21 chr2 18491767 18491861 -234764722 + MIR SINE MIR 56 150 -112 332 279 29 19 chr2 18491984 18492088 -234764495 + MIR SINE MIR 124 228 -34 183 269 86 43 chr2 18492360 18492453 -234764130 + MIR SINE MIR 47 143 -119 33 73 0 0 chr2 18492563 18492631 -234763952 + AT_rich Low_complexity Low_complexity 1 68 0 381 279 103 7 chr2 18493765 18493901 -234762682 - MLT1J2 LTR MaLR -21 429 281 237 230 97 44 chr2 18494012 18494125 -234762458 - MLT1J1 LTR MaLR -323 123 5 1947 244 64 43 chr2 18494448 18495029 -234761554 - MLT1E LTR MaLR 0 593 1 235 275 33 11 chr2 18495292 18495383 -234761200 + MIR3 SINE MIR 74 166 -42 1084 235 155 13 chr2 18496570 18496858 -234759725 - MLT1D LTR MaLR 0 505 151 504 79 13 13 chr2 18496858 18496934 -234759649 + MADE1 DNA Mariner 1 76 -4 1084 235 155 13 chr2 18496934 18497019 -234759564 - MLT1D LTR MaLR -354 151 79 181 327 0 0 chr2 18497144 18497196 -234759387 - L2 LINE L2 -2 3270 3219 3831 150 37 23 chr2 18497200 18497901 -234758682 + MER50 LTR ERV1 1 711 -23 1143 318 52 33 chr2 18498534 18499340 -234757243 + L2 LINE L2 2489 3313 0 955 186 0 30 chr2 18499372 18499539 -234757044 - AluJo SINE Alu -26 286 125 285 128 0 0 chr2 18499539 18499586 -234756997 + (TA)n Simple_repeat Simple_repeat 1 47 0 701 189 8 8 chr2 18499586 18499713 -234756870 - AluJo SINE Alu -183 129 3 362 245 107 60 chr2 18500477 18500775 -234755808 - L1ME4a LINE L1 -224 5897 5586 25 95 0 0 chr2 18501051 18501125 -234755458 + AT_rich Low_complexity Low_complexity 1 74 0 21 36 0 0 chr2 18501316 18501344 -234755239 + AT_rich Low_complexity Low_complexity 1 28 0 446 326 71 55 chr2 18501344 18501779 -234754804 - L1MC/D LINE L1 -2046 5762 5321 254 382 61 0 chr2 18502040 18502171 -234754412 - L2 LINE L2 -459 2855 2717 1460 199 122 0 chr2 18504244 18504506 -234752077 - AluJb SINE Alu -7 295 2 843 221 227 10 chr2 18504509 18504817 -234751766 - MER57A LTR ERV1 -21 382 8 1522 221 39 22 chr2 18504842 18505199 -234751384 + MLT1A1 LTR MaLR 1 363 -2 279 217 17 75 chr2 18505221 18505341 -234751242 - MER104 DNA Tc2 -64 116 4 227 383 25 0 chr2 18505344 18505425 -234751158 - MIR SINE MIR -156 106 24 198 328 125 16 chr2 18506267 18506395 -234750188 + MIR3 SINE MIR 60 201 -7 196 316 22 73 chr2 18508222 18508358 -234748225 - L2 LINE L2 -3 3310 3182 238 193 35 0 chr2 18509360 18509417 -234747166 + L1P LINE L1 4987 5045 -1101 535 340 87 28 chr2 18509467 18510145 -234746438 + L1MC4a LINE L1 5114 5756 -365 300 221 0 47 chr2 18510219 18510305 -234746278 + L1ME4a LINE L1 5935 6016 -105 30 69 0 0 chr2 18510324 18510382 -234746201 + AT_rich Low_complexity Low_complexity 1 58 0 197 208 0 19 chr2 18510458 18510511 -234746072 + GA-rich Low_complexity Low_complexity 1 52 0 1587 231 81 34 chr2 18510565 18511033 -234745550 - MER74B LTR ERVL -50 572 83 1844 128 0 28 chr2 18513199 18513488 -234743095 - L1PA16 LINE L1 -305 5861 5581 * 3029 178 21 3 chr2 18513486 18514357 -234742226 + L1PA16 LINE L1 4721 5603 -563 1744 188 6 3 chr2 18514349 18514678 -234741905 - L1MB1 LINE L1 -239 5950 5621 * 1125 152 26 0 chr2 18514678 18514863 -234741720 + L1MA10 LINE L1 6128 6323 -11 928 214 63 0 chr2 18514866 18515072 -234741511 - Charlie4 DNA MER1_type -1726 235 17 367 319 34 8 chr2 18515699 18515818 -234740765 + L2 LINE L2 3146 3267 -5 579 257 46 0 chr2 18515944 18516096 -234740487 + MIR SINE MIR 84 242 -20 1293 197 10 38 chr2 18516452 18516741 -234739842 + AluJo SINE Alu 1 281 -31 186 103 0 0 chr2 18516744 18516773 -234739810 + (TTG)n Simple_repeat Simple_repeat 2 30 0 248 328 32 64 chr2 18517787 18517912 -234738671 + MIR SINE MIR 3 124 -84 1142 263 40 65 chr2 18517912 18518388 -234738195 + LTR16B LTR ERVL 1 464 0 332 270 87 108 chr2 18518407 18518822 -234737761 + MLT1K LTR MaLR 16 421 -167 564 288 128 21 chr2 18522182 18522516 -234734067 - MLT1I LTR MaLR -19 390 15 255 276 0 23 chr2 18523445 18523532 -234733051 - MLT1I LTR MaLR -15 394 310 181 211 308 0 chr2 18523684 18523736 -234732847 - MIR SINE MIR -147 115 48 358 327 200 0 chr2 18523843 18523993 -234732590 - MER5A DNA MER1_type -1 188 9 21 0 0 0 chr2 18524117 18524138 -234732445 + AT_rich Low_complexity Low_complexity 1 21 0 33348 116 20 15 chr2 18524448 18530560 -234726023 - L1PA7 LINE L1 -1 6153 12 1537 187 0 26 chr2 18530692 18531002 -234725581 + AluJo SINE Alu 1 302 -10 2239 138 39 30 chr2 18531915 18532276 -234724307 - THE1B LTR MaLR 0 364 1 29 0 0 0 chr2 18532281 18532310 -234724273 + AT_rich Low_complexity Low_complexity 1 29 0 247 295 39 0 chr2 18532317 18532395 -234724188 + MLT1K LTR MaLR 424 504 -84 180 280 0 0 chr2 18533004 18533054 -234723529 + L2 LINE L2 3179 3228 -85 261 0 0 0 chr2 18534628 18534657 -234721926 + (TG)n Simple_repeat Simple_repeat 1 29 0 410 264 54 31 chr2 18535862 18535991 -234720592 + MIR SINE MIR 58 189 -73 1864 214 19 19 chr2 18536353 18536727 -234719856 - MLT1A2 LTR MaLR 0 374 1 2033 123 23 0 chr2 18538084 18538385 -234718198 + AluSx SINE Alu 1 308 -4 187 375 163 12 chr2 18539172 18539332 -234717251 + L2 LINE L2 3088 3271 -1 361 300 53 24 chr2 18540152 18540322 -234716261 + MIR SINE MIR 42 216 -46 258 156 0 0 chr2 18541901 18541946 -234714637 + (TGG)n Simple_repeat Simple_repeat 1 45 0 710 181 8 8 chr2 18541962 18542208 -234714375 + GA-rich Low_complexity Low_complexity 1 246 0 263 244 78 44 chr2 18543733 18543823 -234712760 + MER91C DNA MER1_type 1 93 -47 206 386 48 24 chr2 18543862 18544072 -234712511 - L2 LINE L2 -91 3222 3008 313 261 252 8 chr2 18544095 18544214 -234712369 - MIR SINE MIR -65 197 50 340 263 43 50 chr2 18544493 18544677 -234711906 + MIR SINE MIR 37 216 -46 2703 96 16 8 chr2 18544715 18545105 -234711478 + L1PA11 LINE L1 5766 6156 -18 253 372 43 18 chr2 18545642 18545806 -234710777 - MIR SINE MIR -75 187 20 511 224 6 117 chr2 18547071 18547250 -234709333 - MLT1F LTR MaLR 0 542 384 430 285 0 41 chr2 18547325 18547448 -234709135 - MLT1F LTR MaLR -286 304 187 773 241 127 4 chr2 18547674 18547902 -234708681 - MIR SINE MIR 0 262 7 261 246 146 36 chr2 18548571 18548681 -234707902 + L2 LINE L2 3151 3272 0 239 220 40 0 chr2 18549970 18550020 -234706563 + MIR SINE MIR 77 128 -80 300 311 98 8 chr2 18550823 18550955 -234705628 - MIR SINE MIR -37 225 82 844 224 59 59 chr2 18553164 18553383 -234703200 - MER20 DNA MER1_type 0 219 1 349 267 93 24 chr2 18553978 18554142 -234702441 + MIR SINE MIR 22 153 -55 369 86 0 0 chr2 18554166 18554224 -234702359 + (CA)n Simple_repeat Simple_repeat 2 59 0 236 295 114 19 chr2 18554674 18554779 -234701804 + MIR SINE MIR 20 134 -74 2451 58 3 26 chr2 18556083 18556392 -234700191 - AluY SINE Alu -9 302 1 266 153 17 0 chr2 18556909 18556968 -234699615 + CT-rich Low_complexity Low_complexity 2 61 0 718 272 75 65 chr2 18559856 18560242 -234696341 + MLT1J1 LTR MaLR 29 418 -28 242 349 0 0 chr2 18561497 18561563 -234695020 + polypyrimidine Low_complexity Low_complexity 3 68 0 538 172 32 13 chr2 18561569 18561726 -234694857 + CT-rich Low_complexity Low_complexity 1 160 0 428 297 57 40 chr2 18561741 18561916 -234694667 - L2 LINE L2 -20 3252 3075 22 0 0 0 chr2 18562650 18562672 -234693911 + AT_rich Low_complexity Low_complexity 1 22 0 288 342 40 13 chr2 18562694 18562843 -234693740 - MIR SINE MIR -76 186 34 1687 154 186 32 chr2 18563083 18563454 -234693129 - MSTA LTR MaLR 0 428 1 213 39 0 0 chr2 18563626 18563652 -234692931 + (TA)n Simple_repeat Simple_repeat 2 27 0 1379 93 56 42 chr2 18563789 18564003 -234692580 - MER20 DNA MER1_type -2 217 1 189 296 257 20 chr2 18564224 18564376 -234692207 + MIR SINE MIR 17 204 -58 358 171 14 0 chr2 18564386 18564456 -234692127 + MER53 DNA DNA 1 71 -118 233 162 10 101 chr2 18564402 18564501 -234692082 - MER53 DNA DNA -7 182 93 * 381 322 65 7 chr2 18564846 18565021 -234691562 + MIR SINE MIR 23 206 -56 208 108 54 0 chr2 18565053 18565090 -234691493 + CT-rich Low_complexity Low_complexity 1 39 0 273 376 0 0 chr2 18565243 18565344 -234691239 + MIR SINE MIR 20 120 -142 3055 101 0 2 chr2 18565374 18565789 -234690794 - L1PA13 LINE L1 0 6163 5750 395 283 119 86 chr2 18565962 18566449 -234690134 + MLT1J LTR MaLR 1 503 -8 318 286 56 43 chr2 18567294 18567455 -234689128 - MIR SINE MIR -23 239 77 228 377 63 25 chr2 18567736 18567895 -234688688 + MIR3 SINE MIR 3 167 -41 233 261 63 81 chr2 18568606 18568717 -234687866 - L2 LINE L2 -3 3269 3161 273 209 0 0 chr2 18569814 18569881 -234686702 + (TA)n Simple_repeat Simple_repeat 2 68 0 5057 35 2 0 chr2 18570804 18571371 -234685212 - L1PA4 LINE L1 -1 6154 5587 231 125 0 0 chr2 18572157 18572197 -234684386 + (GGGAGA)n Simple_repeat Simple_repeat 4 43 0 182 258 16 0 chr2 18572615 18572677 -234683906 + CT-rich Low_complexity Low_complexity 3 65 0 461 246 62 71 chr2 18572713 18572924 -234683659 - L1ME3A LINE L1 -36 6117 5909 243 0 0 0 chr2 18573002 18573029 -234683554 + (CA)n Simple_repeat Simple_repeat 2 28 0 420 158 32 0 chr2 18573031 18573126 -234683457 + (TA)n Simple_repeat Simple_repeat 1 98 0 956 278 75 87 chr2 18573145 18573809 -234682774 - L1ME3A LINE L1 -290 5859 5189 2526 40 0 10 chr2 18573809 18574106 -234682477 - AluY SINE Alu -17 294 1 956 278 75 87 chr2 18574106 18574627 -234681956 - L1ME3A LINE L1 -960 5189 4663 945 189 6 6 chr2 18574627 18574786 -234681797 + FRAM SINE Alu 2 160 -6 956 278 75 87 chr2 18574786 18575488 -234681095 - L1ME3A LINE L1 -1486 4663 3993 290 136 250 11 chr2 18575569 18575657 -234680926 - MER7A DNA MER2_type -178 168 62 544 325 72 7 chr2 18575739 18576167 -234680416 - L1ME3A LINE L1 -3571 2558 2103 1921 207 0 24 chr2 18576495 18576867 -234679716 + MLT1A1 LTR MaLR 1 363 -2 806 301 49 60 chr2 18576929 18577993 -234678590 - L1MEd LINE L1 -4641 1669 600 2187 120 0 3 chr2 18578022 18578331 -234678252 - AluSg SINE Alu -2 308 1 23 0 0 0 chr2 18578729 18578752 -234677831 + AT_rich Low_complexity Low_complexity 1 23 0 727 293 80 0 chr2 18580191 18580416 -234676167 + MIR SINE MIR 20 262 0 228 394 4 40 chr2 18582754 18583003 -234673580 + L2 LINE L2 2490 2729 -585 191 191 16 95 chr2 18583007 18583070 -234673513 + L2 LINE L2 1999 2056 -1258 32 64 0 13 chr2 18584727 18584745 -234671838 + AT_rich Low_complexity Low_complexity 1 18 -59 2100 84 8 0 chr2 18584745 18585008 -234671575 - AluSc SINE Alu -24 285 21 32 64 0 13 chr2 18585008 18585067 -234671516 + AT_rich Low_complexity Low_complexity 18 77 0 219 229 0 0 chr2 18585155 18585216 -234671367 + (TA)n Simple_repeat Simple_repeat 1 61 0 1294 130 12 50 chr2 18585318 18585570 -234671013 - L1MA7 LINE L1 -183 6108 5868 279 0 0 0 chr2 18585883 18585914 -234670669 + (CCA)n Simple_repeat Simple_repeat 3 33 0 268 252 202 0 chr2 18586761 18586880 -234669703 - MER102b DNA MER1_type -6 335 193 203 308 0 0 chr2 18588604 18588656 -234667927 - L2 LINE L2 -8 3305 3254 2755 137 21 2 chr2 18589331 18589763 -234666820 - L1PA16 LINE L1 -1 6165 5726 294 346 56 0 chr2 18590058 18590165 -234666418 - L2 LINE L2 -3 3269 3157 245 316 51 31 chr2 18590897 18590995 -234665588 + MIR3 SINE MIR 82 181 -27 252 362 15 56 chr2 18591263 18591459 -234665124 - MER5A DNA MER1_type 0 189 2 225 191 159 87 chr2 18594296 18594422 -234662161 + MIR SINE MIR 117 251 -11 269 304 68 47 chr2 18596535 18596683 -234659900 - L2 LINE L2 -208 3064 2914 318 331 78 24 chr2 18596802 18596968 -234659615 + MER5B DNA MER1_type 2 176 -2 222 255 82 71 chr2 18597038 18597136 -234659447 + MIR SINE MIR 65 163 -99 219 69 0 0 chr2 18597745 18597774 -234658809 + (TAA)n Simple_repeat Simple_repeat 2 30 0 273 236 82 0 chr2 18598274 18598346 -234658237 - MIR3 SINE MIR -33 175 96 729 284 101 24 chr2 18600290 18600869 -234655714 - L1ME3A LINE L1 -321 5849 5226 349 290 164 38 chr2 18600869 18601210 -234655373 - L2 LINE L2 -7 3306 2923 1466 241 166 33 chr2 18601420 18601909 -234654674 + MLT1E LTR MaLR 40 593 0 180 0 0 0 chr2 18601986 18602006 -234654577 + (T)n Simple_repeat Simple_repeat 1 20 0 232 158 0 0 chr2 18602006 18602044 -234654539 + Tigger5 DNA MER2_type 37 74 -2249 247 206 32 32 chr2 18602044 18602107 -234654476 - Tigger5 DNA MER2_type -19 2304 2242 * 425 218 0 0 chr2 18602101 18602179 -234654404 + Tigger5 DNA MER2_type 2246 2323 0 220 310 178 8 chr2 18603080 18603209 -234653374 - MIR SINE MIR -31 231 81 382 255 23 13 chr2 18603354 18603482 -234653101 - MIR SINE MIR -64 144 14 718 267 88 74 chr2 18604308 18604935 -234651648 + L2 LINE L2 2665 3313 0 192 250 50 0 chr2 18604951 18605011 -234651572 + MIR SINE MIR 96 158 -104 196 371 98 23 chr2 18605509 18605641 -234650942 + L2 LINE L2 2949 3090 -182 1799 153 66 45 chr2 18605696 18606076 -234650507 - MLT1B LTR MaLR 0 390 3 393 329 93 69 chr2 18606783 18607051 -234649532 + L2 LINE L2 2906 3185 -87 2192 105 10 0 chr2 18607051 18607346 -234649237 - AluSx SINE Alu -14 298 1 393 329 93 69 chr2 18607346 18607411 -234649172 + L2 LINE L2 3185 3247 -25 403 163 68 0 chr2 18608588 18608673 -234647910 + MIR SINE MIR 100 188 -57 485 272 74 97 chr2 18608680 18609001 -234647582 - Tigger8 DNA MER2_type 0 666 364 198 71 0 0 chr2 18609001 18609029 -234647554 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 485 272 74 97 chr2 18609029 18609328 -234647255 - Tigger8 DNA MER2_type -302 364 60 296 330 10 19 chr2 18609582 18609685 -234646898 + MER5B DNA MER1_type 7 108 -70 229 356 56 0 chr2 18609695 18609785 -234646798 + MIR SINE MIR 49 143 -119 900 259 0 5 chr2 18610262 18610459 -234646124 + MER21B LTR ERV1 175 370 -493 616 251 92 85 chr2 18610457 18610740 -234645843 + MER21B LTR ERV1 518 802 -61 * 884 267 41 85 chr2 18610887 18610931 -234645652 - L1MEc LINE L1 -3191 3191 3147 1531 103 85 0 chr2 18610931 18611155 -234645428 + AluSp SINE Alu 62 304 -9 884 267 41 85 chr2 18611155 18611967 -234644616 - L1MEc LINE L1 -3235 3147 2373 206 176 33 66 chr2 18612253 18612344 -234644239 + T-rich Low_complexity Low_complexity 1 88 0 420 305 58 30 chr2 18612358 18612719 -234643864 - L1MEc LINE L1 -4642 1921 1551 2014 190 50 20 chr2 18612721 18613178 -234643405 - L1MC1 LINE L1 -204 6129 5659 290 249 51 8 chr2 18613196 18613322 -234643261 - L1MEc LINE L1 -4987 1531 1259 692 58 0 10 chr2 18614035 18614138 -234642445 + (TCTA)n Simple_repeat Simple_repeat 1 102 0 192 291 18 18 chr2 18614965 18615020 -234641563 + MIR SINE MIR 86 140 -68 183 42 0 0 chr2 18615450 18615474 -234641109 + (ATG)n Simple_repeat Simple_repeat 2 25 0 190 345 103 26 chr2 18615795 18615911 -234640672 - L2 LINE L2 0 3272 3148 21 0 0 0 chr2 18618673 18618694 -234637889 + AT_rich Low_complexity Low_complexity 1 21 0 5931 129 15 38 chr2 18619619 18619815 -234636768 + Tigger1 DNA MER2_type 1 200 -2218 2426 72 0 0 chr2 18619815 18620106 -234636477 + AluY SINE Alu 1 291 -20 5931 129 15 38 chr2 18620106 18620894 -234635689 + Tigger1 DNA MER2_type 200 963 -1455 2228 127 33 30 chr2 18620895 18621258 -234635325 + THE1B LTR MaLR 1 364 0 * 8646 134 33 7 chr2 18621258 18622675 -234633908 + Tigger1 DNA MER2_type 964 2418 0 387 250 11 11 chr2 18622995 18623083 -234633500 + L2 LINE L2 3224 3311 -2 191 216 27 0 chr2 18624062 18624099 -234632484 - L2 LINE L2 -25 3247 3210 * 441 311 39 17 chr2 18624072 18624252 -234632331 - MIR SINE MIR -30 232 49 247 306 74 19 chr2 18625640 18625748 -234630835 - L2 LINE L2 -233 3039 2926 481 238 155 6 chr2 18625808 18625989 -234630594 - MER3 DNA MER1_type -1 208 1 223 306 57 48 chr2 18628260 18628384 -234628199 - MIR SINE MIR -130 132 8 2069 176 62 31 chr2 18629629 18630076 -234626507 + MER119 DNA MER1_type 4 464 -119 3955 78 25 88 chr2 18630076 18630747 -234625836 + MER4A LTR ERV1 1 629 -35 295 167 67 0 chr2 18630741 18630801 -234625782 + MER119 DNA MER1_type 479 542 -41 * 505 232 0 27 chr2 18631065 18631177 -234625406 + MIR SINE MIR 87 195 -67 187 288 68 0 chr2 18631218 18631277 -234625306 + MIR SINE MIR 200 262 0 390 279 181 72 chr2 18631774 18632317 -234624266 + L1M2 LINE L1 838 1374 -5475 855 158 0 149 chr2 18632786 18633007 -234623576 - MER5A DNA MER1_type -1 188 1 393 351 29 44 chr2 18634406 18634611 -234621972 + MIR SINE MIR 34 235 -27 343 284 55 0 chr2 18635993 18636120 -234620463 + MER94 DNA DNA 1 134 0 453 341 42 37 chr2 18636988 18637390 -234619193 - HAL1b LINE L1 -713 635 232 21 36 0 0 chr2 18637422 18637450 -234619133 + AT_rich Low_complexity Low_complexity 1 28 0 265 157 93 46 chr2 18638311 18638419 -234618164 + Charlie7 DNA MER1_type 2443 2555 -57 1166 311 71 19 chr2 18638441 18639030 -234617553 + L1ME1 LINE L1 51 670 -5753 723 277 85 21 chr2 18639128 18639363 -234617220 + L1ME1 LINE L1 974 1223 -5200 627 277 105 11 chr2 18639380 18639746 -234616837 + L1ME1 LINE L1 1335 1740 -4891 342 0 0 0 chr2 18639746 18639784 -234616799 + (CA)n Simple_repeat Simple_repeat 2 39 0 750 276 41 30 chr2 18639799 18640085 -234616498 + L1ME1 LINE L1 2156 2448 -4674 186 43 0 0 chr2 18640085 18640108 -234616475 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 750 276 41 30 chr2 18640108 18640184 -234616399 + L1ME1 LINE L1 2448 2522 -4600 403 200 11 21 chr2 18640274 18640369 -234616214 + MER4A LTR ERV1 5 98 -566 1431 159 5 8 chr2 18640369 18640693 -234615890 + MER4A LTR ERV1 261 664 0 2400 235 61 36 chr2 18640694 18641962 -234614621 + L1ME1 LINE L1 2608 3883 -3058 3170 250 90 31 chr2 18641972 18643343 -234613240 + L1ME1 LINE L1 4018 5469 -1472 414 0 0 0 chr2 18643377 18643423 -234613160 + (TA)n Simple_repeat Simple_repeat 1 46 0 388 216 34 34 chr2 18643535 18643711 -234612872 + A-rich Low_complexity Low_complexity 2 177 0 258 303 0 0 chr2 18643735 18643834 -234612749 + A-rich Low_complexity Low_complexity 1 99 0 198 0 0 0 chr2 18643962 18643984 -234612599 + (TA)n Simple_repeat Simple_repeat 2 23 0 2801 231 98 34 chr2 18643993 18644038 -234612545 + L1ME1 LINE L1 5497 5538 -1423 1978 115 56 0 chr2 18644038 18644325 -234612258 + AluSg SINE Alu 1 303 -7 2801 231 98 34 chr2 18644325 18645653 -234610930 + L1ME1 LINE L1 5538 6952 -9 270 56 0 0 chr2 18645663 18645699 -234610884 + (CA)n Simple_repeat Simple_repeat 2 37 0 1431 160 23 22 chr2 18646181 18647210 -234609373 + L1MA10 LINE L1 5133 6334 0 185 237 40 40 chr2 18647385 18647461 -234609122 + L3b LINE CR1 1327 1402 -181 23 68 0 0 chr2 18648340 18648384 -234608199 + AT_rich Low_complexity Low_complexity 1 44 0 374 308 23 8 chr2 18648631 18648764 -234607819 + L2 LINE L2 1680 1814 -1500 288 289 186 6 chr2 18649364 18649520 -234607063 - MIR SINE MIR -56 206 23 553 54 0 0 chr2 18649589 18649663 -234606920 + AluSc SINE Alu 229 302 -7 11061 182 17 24 chr2 18649671 18652548 -234604035 + L1PA15 LINE L1 2837 5684 -481 2258 103 0 3 chr2 18652548 18652849 -234603734 + AluSp SINE Alu 1 300 -13 11061 182 17 24 chr2 18652849 18653278 -234603305 + L1PA15 LINE L1 5684 6115 -50 528 255 56 46 chr2 18653374 18653590 -234602993 + L1ME LINE L1 5513 5730 -391 200 307 54 96 chr2 18653912 18654078 -234602505 - L2 LINE L2 -57 3215 3057 515 182 10 0 chr2 18655584 18655683 -234600900 - U6 snRNA snRNA 0 107 8 1657 180 81 3 chr2 18656951 18657284 -234599299 - MSTB LTR MaLR -63 363 5 801 303 94 39 chr2 18657291 18657674 -234598909 + L2 LINE L2 2910 3313 0 2330 111 0 0 chr2 18657749 18658046 -234598537 - AluSx SINE Alu -15 297 1 698 181 9 158 chr2 18658173 18658237 -234598346 - MER5A DNA MER1_type 0 189 117 2257 149 57 32 chr2 18658237 18658708 -234597875 + L1MD1 LINE L1 5753 6235 -7 698 181 9 158 chr2 18658708 18658864 -234597719 - MER5A DNA MER1_type -72 117 2 613 168 7 88 chr2 18659158 18659295 -234597288 + MER5B DNA MER1_type 5 130 -48 337 359 39 11 chr2 18659538 18659719 -234596864 + L2 LINE L2 2558 2743 -571 748 219 14 24 chr2 18659872 18660082 -234596501 - L1MB8 LINE L1 -12 6166 5959 293 314 111 26 chr2 18660121 18660274 -234596309 + MIR SINE MIR 21 186 -76 1715 212 137 70 chr2 18660655 18661268 -234595315 - MLT1E1 LTR MaLR 0 654 1 306 370 42 16 chr2 18661740 18661929 -234594654 + MIR SINE MIR 19 212 -50 472 270 17 35 chr2 18661986 18662160 -234594423 + MLT1H LTR MaLR 73 243 -306 2037 128 44 33 chr2 18662488 18662848 -234593735 - THE1B LTR MaLR 0 364 1 240 349 0 28 chr2 18663411 18663520 -234593063 + MIR SINE MIR 111 216 -46 496 265 153 0 chr2 18664575 18664764 -234591819 + MIR SINE MIR 30 247 -15 437 328 113 28 chr2 18665517 18665694 -234590889 + L2 LINE L2 3080 3271 -1 199 333 13 0 chr2 18665973 18666048 -234590535 + L2 LINE L2 2335 2410 -904 2802 237 178 11 chr2 18666445 18666852 -234589731 - L1MC4 LINE L1 -51 7991 7653 1946 144 34 7 chr2 18666852 18667144 -234589439 - AluJb SINE Alu -12 300 1 2802 237 178 11 chr2 18667144 18667869 -234588714 - L1MC4 LINE L1 -389 7653 6640 393 22 0 0 chr2 18667869 18667915 -234588668 + (CA)n Simple_repeat Simple_repeat 2 47 0 2802 237 178 11 chr2 18667915 18668000 -234588583 - L1MC4 LINE L1 -1402 6640 6570 186 111 56 0 chr2 18668487 18668523 -234588060 + L2 LINE L2 3234 3271 -1 311 305 182 5 chr2 18668696 18668883 -234587700 - MIR SINE MIR -11 251 32 2323 88 3 7 chr2 18669154 18669451 -234587132 + AluSx SINE Alu 1 296 -16 440 254 167 0 chr2 18669470 18669584 -234586999 - MIR3 SINE MIR -73 135 3 211 214 60 107 chr2 18669644 18669728 -234586855 - L2 LINE L2 -5 3308 3229 388 189 119 92 chr2 18670984 18671169 -234585414 - MIR SINE MIR -65 197 8 244 320 40 0 chr2 18672206 18672281 -234584302 + L2 LINE L2 3186 3263 -9 1605 307 95 40 chr2 18672325 18673221 -234583362 + L2 LINE L2 1925 2869 -445 784 130 29 120 chr2 18673697 18673905 -234582678 + MER53 DNA DNA 1 189 0 300 180 0 16 chr2 18674267 18674328 -234582255 - L1ME4a LINE L1 -4 6117 6058 274 216 49 39 chr2 18675874 18675976 -234580607 - MER69 DNA AcHobo -42 2484 2382 2077 171 18 5 chr2 18676378 18676758 -234579825 + MLT1B LTR MaLR 6 390 0 315 367 57 19 chr2 18677364 18677522 -234579061 + L2 LINE L2 3081 3244 -28 389 323 37 43 chr2 18677633 18677794 -234578789 - L2 LINE L2 -2 3270 3111 2742 158 8 11 chr2 18677950 18678418 -234578165 - MLT1C LTR MaLR 0 467 1 260 398 0 16 chr2 18678836 18678964 -234577619 + MER115 DNA AcHobo 158 283 -410 1568 221 40 118 chr2 18679276 18679877 -234576706 + MLT2B3 LTR ERVL 1 554 0 304 352 44 31 chr2 18680282 18680441 -234576142 + MER5A DNA MER1_type 29 189 0 1452 86 0 24 chr2 18680444 18680653 -234575930 - L1PA11 LINE L1 -2 6172 5969 1021 137 54 0 chr2 18680965 18681170 -234575413 + L1MA8 LINE L1 6057 6272 -19 551 230 81 6 chr2 18681627 18681788 -234574795 + MLT1B LTR MaLR 3 175 -215 9881 30 1 1 chr2 18681830 18683780 -234572803 - L1PA4 LINE L1 -8 6147 4197 880 210 20 0 chr2 18683854 18684049 -234572534 + MLT1B LTR MaLR 192 390 0 1149 232 16 0 chr2 18684132 18684378 -234572205 - MLT1E1 LTR MaLR 0 654 405 552 192 53 34 chr2 18684423 18684625 -234571958 - MLT1E1 LTR MaLR -394 260 1 406 344 75 0 chr2 18685342 18685502 -234571081 + L2 LINE L2 3100 3271 -1 2546 50 0 7 chr2 18686082 18686380 -234570203 - AluY SINE Alu -13 298 3 356 324 110 40 chr2 18687162 18687335 -234569248 - MIR3 SINE MIR -21 187 3 218 234 340 0 chr2 18687809 18687903 -234568680 - L2 LINE L2 -2 3270 3145 599 300 39 26 chr2 18688748 18688978 -234567605 - MIR SINE MIR -23 239 7 26 0 0 0 chr2 18689013 18689039 -234567544 + AT_rich Low_complexity Low_complexity 1 26 0 239 323 0 0 chr2 18689164 18689226 -234567357 + L3 LINE CR1 1511 1572 -5 421 288 14 7 chr2 18689400 18689536 -234567047 + MIR SINE MIR 31 144 -64 450 329 96 12 chr2 18689774 18689941 -234566642 - MIR3 SINE MIR -11 197 17 406 253 163 12 chr2 18690157 18690323 -234566260 + MIR SINE MIR 71 261 -1 686 176 8 8 chr2 18690924 18691084 -234565499 + AluJb SINE Alu 160 319 0 221 290 16 0 chr2 18691858 18691920 -234564663 + GA-rich Low_complexity Low_complexity 4 66 0 1797 173 84 11 chr2 18692709 18693078 -234563505 + MSTD LTR MaLR 1 396 0 283 328 86 8 chr2 18693207 18693335 -234563248 - L2 LINE L2 -3 3310 3173 312 354 42 14 chr2 18693344 18693488 -234563095 + MIR SINE MIR 45 192 -70 210 289 0 0 chr2 18693589 18693634 -234562949 + MIR SINE MIR 51 95 -167 383 83 17 0 chr2 18693658 18693718 -234562865 + (TCCA)n Simple_repeat Simple_repeat 1 61 0 902 225 20 10 chr2 18693781 18693981 -234562602 - MER58A DNA MER1_type -18 206 5 185 284 23 34 chr2 18693999 18694087 -234562496 - L2 LINE L2 -86 3227 3141 23 33 0 0 chr2 18695070 18695100 -234561483 + AT_rich Low_complexity Low_complexity 1 30 0 189 175 0 0 chr2 18695122 18695162 -234561421 + (TA)n Simple_repeat Simple_repeat 1 40 0 478 287 25 13 chr2 18695180 18695337 -234561246 - MIR SINE MIR -72 190 32 2276 127 0 6 chr2 18695408 18695762 -234560821 - L1PB1 LINE L1 -1 6150 5799 847 245 148 30 chr2 18696385 18696817 -234559766 + L2 LINE L2 2831 3313 0 402 356 91 68 chr2 18697107 18697548 -234559035 - L2 LINE L2 0 3272 2822 2329 118 19 22 chr2 18697648 18698013 -234558570 + THE1B LTR MaLR 1 364 0 3925 84 61 77 chr2 18698013 18698705 -234557878 + THE1B-int LTR MaLR 1 681 -899 * 4299 131 35 6 chr2 18698702 18700096 -234556487 - L1PA11 LINE L1 -256 5918 4495 1148 141 4 70 chr2 18700128 18700245 -234556338 - L1PA12 LINE L1 -1547 6037 5945 2364 87 3 19 chr2 18700245 18700555 -234556028 - AluSg SINE Alu -5 305 1 1148 141 4 70 chr2 18700555 18700693 -234555890 - L1PA12 LINE L1 -1639 5945 5799 732 23 0 0 chr2 18700795 18700881 -234555702 + (TA)n Simple_repeat Simple_repeat 2 87 0 9154 203 14 16 chr2 18700895 18703098 -234553485 - L1PA12 LINE L1 -2763 4821 2622 2092 147 61 33 chr2 18703099 18703615 -234552968 + MLT2A2 LTR ERVL 1 554 0 6971 217 21 31 chr2 18703617 18703785 -234552798 - L1PA12 LINE L1 -4952 2632 2464 2488 54 0 7 chr2 18703785 18704083 -234552500 - AluY SINE Alu -15 296 1 6971 217 21 31 chr2 18704083 18705777 -234550806 - L1PA12 LINE L1 -5120 2464 1 492 242 42 81 chr2 18706914 18707199 -234549384 + L1M4 LINE L1 1525 1798 -4586 881 246 187 13 chr2 18707282 18707807 -234548776 + L1M4 LINE L1 2473 3088 -3294 195 161 32 32 chr2 18707812 18707874 -234548709 + GA-rich Low_complexity Low_complexity 3 64 0 681 235 85 54 chr2 18707875 18708228 -234548355 + L1M4 LINE L1 4929 5292 -1090 237 306 28 0 chr2 18708264 18708336 -234548247 - L2 LINE L2 -688 2626 2553 453 227 9 27 chr2 18708624 18708734 -234547849 + MIR SINE MIR 113 220 -42 972 163 0 7 chr2 18709314 18709467 -234547116 - FRAM SINE Alu -30 146 1 368 339 70 0 chr2 18710066 18710237 -234546346 - MIR SINE MIR -75 187 5 2394 80 0 3 chr2 18710948 18711250 -234545333 + AluY SINE Alu 1 301 -10 233 329 110 97 chr2 18711268 18711496 -234545087 - L2 LINE L2 -4 3268 3038 420 176 0 0 chr2 18711632 18711700 -234544883 + MIR SINE MIR 84 151 -111 246 231 96 96 chr2 18712164 18712268 -234544315 + MIR SINE MIR 138 241 -21 267 276 0 0 chr2 18714216 18714292 -234542291 + (TA)n Simple_repeat Simple_repeat 2 77 0 213 211 0 35 chr2 18715144 18715201 -234541382 + A-rich Low_complexity Low_complexity 6 60 0 266 253 67 27 chr2 18715335 18715410 -234541173 - L2 LINE L2 -8 3264 3187 422 271 46 20 chr2 18716311 18716462 -234540121 + MIR3 SINE MIR 30 184 -24 231 309 40 59 chr2 18717393 18717545 -234539038 + L2 LINE L2 3165 3313 0 183 184 0 0 chr2 18718089 18718127 -234538456 + (TG)n Simple_repeat Simple_repeat 1 38 0 2204 82 0 3 chr2 18718334 18718648 -234537935 + AluSg SINE Alu 1 313 0 28 0 0 0 chr2 18719287 18719315 -234537268 + AT_rich Low_complexity Low_complexity 1 28 0 206 382 53 0 chr2 18719673 18719749 -234536834 + L2 LINE L2 3132 3211 -61 431 325 133 21 chr2 18719928 18720162 -234536421 - MIR SINE MIR 0 262 3 314 257 0 14 chr2 18720974 18721044 -234535539 + MIR3 SINE MIR 117 185 -23 452 255 0 0 chr2 18721129 18721235 -234535348 + MIR SINE MIR 49 154 -108 1604 240 21 30 chr2 18721397 18721868 -234534715 - MLT1C LTR MaLR 0 467 1 237 196 36 0 chr2 18722976 18723032 -234533551 + (TCTA)n Simple_repeat Simple_repeat 4 61 0 23 0 0 0 chr2 18723052 18723075 -234533508 + AT_rich Low_complexity Low_complexity 1 23 0 276 283 10 20 chr2 18723291 18723390 -234533193 + CT-rich Low_complexity Low_complexity 3 100 0 272 197 51 8 chr2 18723422 18723539 -234533044 + GA-rich Low_complexity Low_complexity 5 126 0 261 364 34 17 chr2 18723934 18724052 -234532531 + MIR3 SINE MIR 4 123 -85 2414 77 0 3 chr2 18725365 18725665 -234530918 + AluY SINE Alu 1 299 -12 185 81 0 54 chr2 18725854 18725891 -234530692 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 247 414 40 0 chr2 18726026 18726125 -234530458 - L2 LINE L2 -48 3224 3122 278 339 18 18 chr2 18726782 18726894 -234529689 + MIR SINE MIR 24 135 -73 363 121 0 0 chr2 18727103 18727161 -234529422 + (TTCC)n Simple_repeat Simple_repeat 3 60 0 205 204 41 0 chr2 18728343 18728392 -234528191 + (TG)n Simple_repeat Simple_repeat 2 52 0 448 289 102 21 chr2 18729166 18729353 -234527230 + MIR SINE MIR 46 247 -15 342 289 183 0 chr2 18729591 18729826 -234526757 - HsTC2 DNA Tc2 -1010 888 611 2001 86 50 11 chr2 18730074 18730354 -234526229 - AluY SINE Alu -20 291 1 351 121 0 48 chr2 18730654 18730737 -234525846 + L1MA6 LINE L1 6220 6298 -2 2233 162 11 37 chr2 18730903 18731367 -234525216 - Tigger2 DNA MER2_type 0 2718 2267 326 194 15 0 chr2 18731351 18731418 -234525165 - Tigger2 DNA MER2_type -2649 69 2 * 335 299 37 9 chr2 18731613 18731720 -234524863 + MIR SINE MIR 32 141 -121 2311 111 30 25 chr2 18732370 18732732 -234523851 + THE1B LTR MaLR 1 364 0 6513 226 55 61 chr2 18734075 18735048 -234521535 - L1PB3 LINE L1 -2 7571 6594 1981 115 3 21 chr2 18735048 18735374 -234521209 - AluY SINE Alu 0 321 1 6513 226 55 61 chr2 18735374 18737005 -234519578 - L1PB3 LINE L1 -979 6594 4955 2234 37 0 0 chr2 18737005 18737277 -234519306 + L1PA4 LINE L1 5878 6149 -6 6513 226 55 61 chr2 18737277 18739653 -234516930 - L1PB3 LINE L1 -2618 4955 3628 2077 70 0 4 chr2 18739653 18739910 -234516673 - AluY SINE Alu -16 295 40 6513 226 55 61 chr2 18739910 18742816 -234513767 - L1PB3 LINE L1 -3945 3628 706 193 223 85 64 chr2 18742875 18742969 -234513614 + MIR SINE MIR 148 243 -19 24 67 0 0 chr2 18743365 18743410 -234513173 + AT_rich Low_complexity Low_complexity 1 45 0 272 328 95 53 chr2 18744220 18744409 -234512174 - MIR SINE MIR -16 246 50 2695 102 5 3 chr2 18744942 18745316 -234511267 + THE1C LTR MaLR 1 375 0 1417 280 170 61 chr2 18745782 18747305 -234509278 - L2 LINE L2 0 3313 1638 207 0 0 0 chr2 18748531 18748554 -234508029 + (T)n Simple_repeat Simple_repeat 1 23 0 21 0 0 0 chr2 18749193 18749214 -234507369 + AT_rich Low_complexity Low_complexity 1 21 0 255 274 186 0 chr2 18749952 18750065 -234506518 - MIR SINE MIR 0 262 129 2224 204 16 45 chr2 18750213 18750699 -234505884 + MER70A LTR ERVL 1 472 0 1920 118 7 3 chr2 18750881 18751169 -234505414 - AluSc SINE Alu 0 309 21 468 344 62 0 chr2 18751564 18751756 -234504827 + MIR SINE MIR 59 262 0 929 171 0 11 chr2 18752123 18752310 -234504273 + L1M4 LINE L1 5480 5657 -511 2984 214 32 10 chr2 18752318 18753014 -234503569 - L1PB3 LINE L1 -6845 720 10 243 256 98 0 chr2 18753696 18753778 -234502805 - MIR3 SINE MIR -10 198 109 234 352 132 0 chr2 18753797 18753888 -234502695 + L2 LINE L2 3146 3248 -24 216 300 0 0 chr2 18754290 18754340 -234502243 + (TG)n Simple_repeat Simple_repeat 2 51 0 487 179 74 99 chr2 18755150 18755312 -234501271 + Charlie8 DNA MER1_type 1 158 -2259 1255 231 141 53 chr2 18755420 18755852 -234500731 + MER21B LTR ERV1 12 481 -382 2072 184 88 7 chr2 18755853 18756531 -234500052 + L1MA9 LINE L1 4786 5506 -743 783 242 11 0 chr2 18756533 18756711 -234499872 + L1MA9 LINE L1 5599 5778 -534 213 39 0 0 chr2 18756722 18756748 -234499835 + (TCCA)n Simple_repeat Simple_repeat 3 28 0 43423 44 4 1 chr2 18756748 18762887 -234493696 - L1PA4 LINE L1 0 6155 3 1373 167 53 111 chr2 18762901 18762917 -234493666 + L1MA9 LINE L1 5811 5826 -486 2107 101 21 3 chr2 18762917 18763205 -234493378 + AluSc SINE Alu 1 293 -16 1373 167 53 111 chr2 18763205 18763638 -234492945 + L1MA9 LINE L1 5826 6234 -78 705 198 12 17 chr2 18763599 18763771 -234492812 - L1M2 LINE L1 -582 5730 5560 * 30 59 0 0 chr2 18763887 18763938 -234492645 + AT_rich Low_complexity Low_complexity 1 51 0 996 239 46 31 chr2 18763961 18764221 -234492362 + MER21B LTR ERV1 472 735 -128 2552 193 52 4 chr2 18764224 18764722 -234491861 + Tigger7 DNA MER2_type 1 522 -211 497 202 11 0 chr2 18764722 18764811 -234491772 + Tigger7 DNA MER2_type 2402 2491 0 336 292 165 49 chr2 18765328 18765794 -234490789 - L1ME4a LINE L1 -77 6044 5525 414 238 102 20 chr2 18765858 18766005 -234490578 - MIR SINE MIR -50 212 54 204 366 54 9 chr2 18766041 18766153 -234490430 - MIR SINE MIR -73 135 19 213 121 0 0 chr2 18766227 18766260 -234490323 + (TG)n Simple_repeat Simple_repeat 2 34 0 3557 258 114 28 chr2 18768929 18770522 -234486061 + HAL1 LINE L1 84 1813 -694 2495 157 59 0 chr2 18770593 18771019 -234485564 - LTR47A LTR ERVL -1 451 1 445 277 158 32 chr2 18771020 18771298 -234485285 + MLT1J2 LTR MaLR 77 389 -61 1379 281 96 20 chr2 18771343 18771987 -234484596 + HAL1 LINE L1 1815 2507 0 2395 249 38 4 chr2 18773823 18774740 -234481843 - L1M LINE L1 -767 5379 2479 1777 208 102 71 chr2 18774740 18775347 -234481236 - MLT1E2 LTR MaLR 0 626 1 766 218 93 19 chr2 18775518 18776025 -234480558 - L1MDb LINE L1 -3667 2739 2200 7272 134 31 55 chr2 18776027 18777355 -234479228 - HSMAR2 DNA Mariner -1 1301 6 3322 231 55 20 chr2 18777358 18778786 -234477797 - L1MDb LINE L1 -4211 2195 716 254 33 0 0 chr2 18779160 18779190 -234477393 - THE1B LTR MaLR -2 362 333 2372 101 24 6 chr2 18779388 18779724 -234476859 - THE1B LTR MaLR -22 342 1 1497 171 111 62 chr2 18780181 18780619 -234475964 + LTR56 LTR ERV1 1 436 -1 411 304 0 0 chr2 18780638 18780750 -234475833 - L1MDb LINE L1 -6276 133 22 285 271 64 7 chr2 18780847 18780987 -234475596 - L1ME4a LINE L1 -13 6108 5961 1040 159 88 100 chr2 18781287 18781626 -234474957 + LTR49 LTR ERV1 3 337 -258 799 193 0 53 chr2 18781755 18781942 -234474641 - FRAM SINE Alu 0 176 1 267 31 0 0 chr2 18782670 18782702 -234473881 + (ATG)n Simple_repeat Simple_repeat 1 32 0 222 337 0 47 chr2 18784112 18784198 -234472385 - L2 LINE L2 0 3313 3232 258 299 85 60 chr2 18784490 18784691 -234471892 - L2 LINE L2 0 3272 3067 250 338 46 22 chr2 18785146 18785314 -234471269 - MIR SINE MIR -57 205 32 255 326 54 16 chr2 18785529 18785658 -234470925 + MIR SINE MIR 39 172 -90 251 122 20 0 chr2 18786215 18786264 -234470319 + (CA)n Simple_repeat Simple_repeat 1 50 0 351 243 0 0 chr2 18786806 18786876 -234469707 + L2 LINE L2 3200 3269 -44 366 350 11 28 chr2 18787596 18787773 -234468810 - L1ME4a LINE L1 -201 5920 5747 1403 143 5 0 chr2 18788225 18788449 -234468134 + L1MB3 LINE L1 5545 5769 -414 1706 171 35 9 chr2 18788487 18788827 -234467756 + L1MB3 LINE L1 5759 6107 -76 1578 96 14 0 chr2 18789263 18789483 -234467100 + MLT2A2 LTR ERVL 1 223 -230 622 71 0 0 chr2 18789483 18789568 -234467015 + MLT2A2 LTR ERVL 369 453 0 216 97 0 0 chr2 18790759 18790790 -234465793 + (TA)n Simple_repeat Simple_repeat 2 32 0 2170 134 0 0 chr2 18791110 18791408 -234465175 - AluSx SINE Alu -14 298 1 3817 143 68 52 chr2 18791618 18792432 -234464151 + L1MA9 LINE L1 5473 6299 -13 203 219 82 82 chr2 18792982 18793055 -234463528 + MIR SINE MIR 28 100 -162 22 35 0 0 chr2 18793324 18793353 -234463230 + AT_rich Low_complexity Low_complexity 1 29 0 357 281 28 40 chr2 18794032 18794283 -234462300 - HAL1b LINE L1 -79 2428 793 1801 163 52 0 chr2 18794326 18794614 -234461969 + AluSx SINE Alu 4 306 -6 1757 181 10 3 chr2 18794618 18794921 -234461662 + AluJb SINE Alu 1 305 -7 333 181 32 11 chr2 18794928 18795022 -234461561 + GA-rich Low_complexity Low_complexity 1 96 0 2062 150 12 0 chr2 18795058 18795391 -234461192 + MER1B DNA MER1_type 1 337 0 527 293 14 0 chr2 18795557 18795704 -234460879 + MIR SINE MIR 82 230 -32 1638 193 49 21 chr2 18796078 18796508 -234460075 - L1PB4 LINE L1 -824 5322 4881 4872 132 8 56 chr2 18796508 18797397 -234459186 + L1PB4 LINE L1 5308 6153 -3 311 310 11 0 chr2 18797774 18797861 -234458722 + L1M4b LINE L1 1360 1447 -5412 453 257 74 68 chr2 18798015 18798509 -234458074 + L1M4b LINE L1 1788 2283 -4674 13289 83 8 8 chr2 18798509 18800512 -234456071 + L1PA7 LINE L1 3532 5553 -601 8207 72 8 4 chr2 18800512 18801579 -234455004 + MER11C LTR ERVK 1 1071 0 13289 83 8 8 chr2 18801579 18802179 -234454404 + L1PA7 LINE L1 5552 6151 -3 453 257 74 68 chr2 18802179 18802306 -234454277 + L1M4b LINE L1 2283 2408 -4549 342 211 53 0 chr2 18802405 18802500 -234454083 + MLT1I LTR MaLR 304 403 -6 576 235 174 0 chr2 18802641 18802773 -234453810 - MER5A DNA MER1_type -6 183 29 1683 298 79 32 chr2 18802932 18804223 -234452360 - L1MEd LINE L1 -4480 1649 268 1683 182 28 25 chr2 18804317 18804679 -234451904 + MLT1A1 LTR MaLR 1 363 -2 577 323 53 8 chr2 18806207 18806459 -234450124 + MIR SINE MIR 5 262 0 198 325 162 52 chr2 18808241 18808432 -234448151 - MIR SINE MIR -31 231 20 233 279 19 87 chr2 18808864 18808968 -234447615 + MIR3 SINE MIR 67 163 -45 206 274 0 107 chr2 18809039 18809123 -234447460 - L2 LINE L2 -5 3308 3234 285 209 60 0 chr2 18809202 18809269 -234447314 - MLT1I LTR MaLR -8 401 331 354 245 86 26 chr2 18809447 18809598 -234446985 - MLT1J2 LTR MaLR -290 160 1 820 176 6 42 chr2 18810043 18810208 -234446375 - FRAM SINE Alu -7 159 1 22 0 0 0 chr2 18810299 18810321 -234446262 + AT_rich Low_complexity Low_complexity 1 22 0 2571 219 22 2 chr2 18810330 18810920 -234445663 - L1ME1 LINE L1 -6 6160 5559 223 278 221 11 chr2 18811087 18811210 -234445373 + MIR SINE MIR 29 183 -65 * 581 273 118 46 chr2 18811209 18811447 -234445136 + MIR SINE MIR 8 262 0 2264 121 0 6 chr2 18811522 18811836 -234444747 + AluSx SINE Alu 1 312 0 664 227 8 0 chr2 18811972 18812100 -234444483 + FLAM_A SINE Alu 1 129 -4 438 254 0 0 chr2 18812676 18812794 -234443789 - L1MC4 LINE L1 -1 8041 7924 519 251 18 31 chr2 18812833 18813060 -234443523 - L1MC4 LINE L1 -128 7914 7691 663 258 99 44 chr2 18813069 18813328 -234443255 - L1MC4a LINE L1 -1279 6529 6235 1824 83 4 11 chr2 18813328 18813592 -234442991 - L1PA8 LINE L1 0 6172 5911 663 258 99 44 chr2 18813592 18813767 -234442816 - L1MC4a LINE L1 -1573 6235 6071 207 222 33 22 chr2 18814778 18814868 -234441715 + (TA)n Simple_repeat Simple_repeat 2 92 0 329 342 57 16 chr2 18915813 18916006 -234340577 - L2 LINE L2 -234 3038 2838 2173 178 73 9 chr2 18916423 18916862 -234339721 + MLT1C LTR MaLR 1 467 0 24 32 0 0 chr2 18917162 18917193 -234339390 + AT_rich Low_complexity Low_complexity 1 31 0 191 167 42 28 chr2 18917433 18917505 -234339078 + GA-rich Low_complexity Low_complexity 3 75 0 333 0 0 0 chr2 18919566 18919603 -234336980 + (CA)n Simple_repeat Simple_repeat 2 38 0 21 36 0 0 chr2 18919703 18919731 -234336852 + AT_rich Low_complexity Low_complexity 1 28 0 777 154 27 58 chr2 18919941 18919968 -234336615 + L1MA7 LINE L1 6108 6134 -157 1796 158 0 17 chr2 18919968 18920266 -234336317 - AluJb SINE Alu -19 293 1 777 154 27 58 chr2 18920266 18920426 -234336157 + L1MA7 LINE L1 6134 6289 -2 22 0 0 0 chr2 18920640 18920662 -234335921 + AT_rich Low_complexity Low_complexity 1 22 0 2003 127 68 14 chr2 18920718 18921073 -234335510 + THE1C LTR MaLR 2 375 0 311 304 20 0 chr2 18923527 18923629 -234332954 - MLT1J2 LTR MaLR 0 450 347 215 313 31 0 chr2 18923632 18923696 -234332887 + (CATG)n Simple_repeat Simple_repeat 2 67 0 293 263 113 0 chr2 18923708 18923788 -234332795 - MLT1J1 LTR MaLR -117 329 241 507 228 52 15 chr2 18923789 18923925 -234332658 - MLT1J2 LTR MaLR -240 210 70 453 220 0 119 chr2 18924157 18924316 -234332267 - MIR SINE MIR -2 260 121 366 298 71 34 chr2 18924458 18925273 -234331310 - L1MEd LINE L1 -2920 3209 2365 783 166 0 190 chr2 18925318 18925602 -234330981 + L1M4 LINE L1 4868 5097 -1049 633 259 32 37 chr2 18925640 18925829 -234330754 + MER58A DNA MER1_type 34 221 -3 349 335 66 19 chr2 18925882 18926139 -234330444 - HAL1 LINE L1 -753 1754 1486 232 306 24 16 chr2 18926402 18926526 -234330057 - L1MEd LINE L1 -5129 990 866 276 303 28 62 chr2 18927813 18928137 -234328446 + HAL1 LINE L1 2001 2313 -194 436 252 9 9 chr2 18928314 18928429 -234328154 + L1PA16 LINE L1 6046 6160 -6 8246 84 2 0 chr2 18928436 18929557 -234327026 - L1P LINE L1 -1833 4313 3191 7057 62 0 0 chr2 18929558 18930658 -234325925 + L1PA7 LINE L1 5037 6148 -6 856 276 30 8 chr2 18930690 18930958 -234325625 - MER97c DNA MER1_type? -570 520 247 76 61 0 0 chr2 18930968 18931100 -234325483 + AT_rich Low_complexity Low_complexity 1 132 0 26 30 0 0 chr2 18931149 18931182 -234325401 + AT_rich Low_complexity Low_complexity 1 33 0 643 207 78 47 chr2 18931231 18931424 -234325159 - MER97a DNA MER1_type? -640 254 56 6861 157 24 9 chr2 18933513 18934725 -234321858 - Tigger3b DNA MER2_type -1 1230 1 200 282 186 16 chr2 18935309 18935433 -234321150 - MIR SINE MIR -53 209 65 317 306 22 0 chr2 18936605 18936785 -234319798 + L1ME4a LINE L1 5691 5874 -247 6745 65 2 4 chr2 18936798 18938079 -234318504 - L1PA7 LINE L1 0 6154 4865 6443 95 0 0 chr2 18938079 18938966 -234317617 + L1PA7 LINE L1 3976 4862 -1284 1154 283 16 10 chr2 18939014 18939322 -234317261 + HsTC2b DNA Tc2 10 319 -596 2819 255 41 18 chr2 18939324 18940297 -234316286 + L1M4 LINE L1 4044 5039 -1107 1847 188 33 0 chr2 18941630 18941966 -234314617 + MER7A DNA MER2_type 1 345 -1 21 0 0 0 chr2 18942001 18942022 -234314561 + AT_rich Low_complexity Low_complexity 1 21 0 219 36 0 0 chr2 18942148 18942176 -234314407 + (TTA)n Simple_repeat Simple_repeat 2 29 0 2414 40 0 30 chr2 18942178 18942482 -234314101 - AluY SINE Alu -16 295 1 22 0 0 0 chr2 18942488 18942510 -234314073 + AT_rich Low_complexity Low_complexity 1 22 0 2308 69 0 3 chr2 18942556 18942847 -234313736 - AluY SINE Alu -21 290 1 26 30 0 0 chr2 18942855 18942888 -234313695 + AT_rich Low_complexity Low_complexity 1 33 0 2270 163 75 5 chr2 18944255 18944655 -234311928 - MSTA LTR MaLR 0 428 1 349 246 183 0 chr2 18944660 18944802 -234311781 - MIR SINE MIR -2 260 93 381 301 145 62 chr2 18944946 18945401 -234311182 - L1ME4a LINE L1 -56 6065 5573 26 0 0 0 chr2 18945779 18945805 -234310778 + AT_rich Low_complexity Low_complexity 1 26 0 32 0 0 0 chr2 18945941 18945973 -234310610 + AT_rich Low_complexity Low_complexity 1 32 0 23 68 0 0 chr2 18946107 18946151 -234310432 + AT_rich Low_complexity Low_complexity 1 44 0 202 182 0 0 chr2 18946401 18946434 -234310149 + (TG)n Simple_repeat Simple_repeat 2 34 0 2551 52 7 0 chr2 18947011 18947316 -234309267 - AluY SINE Alu -4 307 1 22 56 0 0 chr2 18947531 18947567 -234309016 + AT_rich Low_complexity Low_complexity 1 36 0 27 65 0 26 chr2 18947653 18947675 -234308908 + AT_rich Low_complexity Low_complexity 1 22 -53 1486 96 36 0 chr2 18947675 18947894 -234308689 + L1PA10 LINE L1 5942 6168 0 27 65 0 26 chr2 18947894 18947948 -234308635 + AT_rich Low_complexity Low_complexity 22 75 0 1989 108 54 0 chr2 18948148 18948425 -234308158 + AluSg SINE Alu 1 292 -18 233 92 58 23 chr2 18948425 18948512 -234308071 + (TTATA)n Simple_repeat Simple_repeat 5 94 0 316 306 52 43 chr2 18949189 18949513 -234307070 + L1MC4a LINE L1 5268 5594 -2214 372 328 34 60 chr2 18949536 18949771 -234306812 + L1MC4a LINE L1 5682 5910 -1898 2160 128 0 0 chr2 18949773 18950078 -234306505 - AluSq SINE Alu -8 305 1 28 71 0 0 chr2 18950300 18950356 -234306227 + AT_rich Low_complexity Low_complexity 1 56 0 282 206 0 0 chr2 18950668 18950736 -234305847 + (ATG)n Simple_repeat Simple_repeat 3 70 0 8615 138 26 15 chr2 18951279 18952681 -234303902 + Tigger1 DNA MER2_type 84 1501 -917 2425 140 3 0 chr2 18952681 18953060 -234303523 - Tigger1 DNA MER2_type -356 2062 1683 776 202 104 0 chr2 18953269 18953452 -234303131 - MER105 DNA DNA -1 203 2 290 282 10 10 chr2 18953489 18953592 -234302991 + MLT1L LTR MaLR 513 615 0 3436 235 66 35 chr2 18954200 18954907 -234301676 + L1ME1 LINE L1 4099 4783 -1383 1987 109 32 14 chr2 18954907 18955024 -234301559 + AluSc SINE Alu 3 116 -193 207 0 0 0 chr2 18955024 18955047 -234301536 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1987 109 32 14 chr2 18955047 18955213 -234301370 + AluSc SINE Alu 116 291 -18 3436 235 66 35 chr2 18955213 18956476 -234300107 + L1ME1 LINE L1 4783 6120 -46 180 158 0 0 chr2 18956941 18956979 -234299604 + (TA)n Simple_repeat Simple_repeat 2 39 0 288 0 0 0 chr2 18956981 18957013 -234299570 + (TC)n Simple_repeat Simple_repeat 2 33 0 225 0 0 0 chr2 18957012 18957037 -234299546 + (TA)n Simple_repeat Simple_repeat 2 26 0 * 1392 183 28 41 chr2 18957573 18957951 -234298632 + MLT1C LTR MaLR 3 442 -25 742 239 144 1 chr2 18958322 18958625 -234297958 - MER57A LTR ERV1 -12 391 69 2360 99 7 0 chr2 18958627 18958931 -234297652 - AluSg SINE Alu -4 306 1 1500 93 13 49 chr2 18958931 18959156 -234297427 - AluSq SINE Alu -14 299 83 411 364 8 0 chr2 18959549 18959678 -234296905 - L2 LINE L2 0 3272 3143 1147 187 60 4 chr2 18960887 18961155 -234295428 + L1MC3 LINE L1 7476 7758 -27 1627 156 39 0 chr2 18962283 18962540 -234294043 - AluJb SINE Alu -45 267 1 10639 203 12 17 chr2 18963034 18966494 -234290089 + L1PB3 LINE L1 2712 6154 0 688 245 75 43 chr2 18966528 18966904 -234289679 + L1MC4 LINE L1 7654 8041 -1 417 287 161 31 chr2 18966971 18967326 -234289257 + L1ME4a LINE L1 5535 5935 -186 192 77 0 0 chr2 18967417 18967443 -234289140 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 1060 154 0 6 chr2 18969942 18970104 -234286479 + FRAM SINE Alu 1 160 -16 2234 113 7 3 chr2 18971612 18971913 -234284670 - AluSq SINE Alu -11 302 1 183 205 0 0 chr2 18972150 18972189 -234284394 + CT-rich Low_complexity Low_complexity 2 40 0 213 311 16 0 chr2 18972904 18972965 -234283618 - MER91B DNA MER1_type -119 71 10 253 333 22 0 chr2 18972975 18973065 -234283518 - MIR3 SINE MIR -3 205 114 2311 84 0 0 chr2 18973259 18973546 -234283037 + AluSc SINE Alu 1 287 -22 441 286 70 60 chr2 18973866 18974051 -234282532 + MIR3 SINE MIR 13 199 -9 183 42 0 0 chr2 18975001 18975025 -234281558 + (GA)n Simple_repeat Simple_repeat 2 25 0 256 286 78 0 chr2 18975527 18975604 -234280979 + MIR3 SINE MIR 78 160 -48 410 218 96 102 chr2 18975606 18975803 -234280780 - MER102b DNA MER1_type -1 340 145 1039 229 175 16 chr2 18975813 18976201 -234280382 - MLT2B2 LTR ERVL -65 450 1 1508 234 58 42 chr2 18976223 18976705 -234279878 + MLT1E2 LTR MaLR 135 624 -2 227 251 6 75 chr2 18977017 18977123 -234279460 - MIR SINE MIR -52 156 88 264 248 30 69 chr2 18977247 18977348 -234279235 - MIR SINE MIR -102 160 64 202 283 0 17 chr2 18978200 18978260 -234278323 + L3 LINE CR1 1518 1576 -1 1035 257 84 42 chr2 18978628 18978994 -234277589 + MLT1E LTR MaLR 1 385 -208 401 63 21 179 chr2 18978994 18979058 -234277525 - MADE1 DNA Mariner 0 80 34 2381 72 0 3 chr2 18979058 18979349 -234277234 - AluY SINE Alu -11 300 11 401 63 21 179 chr2 18979349 18979379 -234277204 - MADE1 DNA Mariner -46 34 1 1035 257 84 42 chr2 18979379 18979597 -234276986 + MLT1E LTR MaLR 385 592 -1 250 326 138 0 chr2 18980263 18980401 -234276182 - MIR3 SINE MIR -19 189 33 237 313 9 18 chr2 18981011 18981123 -234275460 + GA-rich Low_complexity Low_complexity 5 115 0 220 302 24 63 chr2 18982362 18982488 -234274095 + MIR SINE MIR 61 181 -81 218 209 0 0 chr2 18982603 18982646 -234273937 + L2 LINE L2 3263 3305 -8 222 318 24 24 chr2 18983354 18983439 -234273144 + L2 LINE L2 2897 2981 -291 196 339 17 0 chr2 18983454 18983513 -234273070 + L2 LINE L2 3116 3175 -97 926 182 86 0 chr2 18983601 18983788 -234272795 + MER3 DNA MER1_type 7 209 0 312 160 0 0 chr2 18983745 18983795 -234272788 - MER3 DNA MER1_type -119 90 41 * 238 329 12 0 chr2 18984686 18984768 -234271815 - MIR SINE MIR -72 136 54 * 389 305 108 15 chr2 18984756 18984959 -234271624 - L3 LINE CR1 -925 652 431 223 356 91 30 chr2 18987629 18987761 -234268822 - MIR3 SINE MIR -63 145 6 259 219 19 38 chr2 18988479 18988584 -234267999 + (TA)n Simple_repeat Simple_repeat 2 104 0 205 346 79 64 chr2 18989237 18989517 -234267066 - L2 LINE L2 -53 3219 2936 427 316 120 44 chr2 18991402 18991627 -234264956 - MIR SINE MIR -13 249 8 335 253 33 22 chr2 18993264 18993355 -234263228 + MIR SINE MIR 49 140 -68 215 208 38 38 chr2 18993385 18993438 -234263145 - MER5A DNA MER1_type -74 115 63 269 260 0 13 chr2 18993733 18993810 -234262773 - MLT1J2 LTR MaLR -14 436 361 2276 99 0 13 chr2 18994082 18994396 -234262187 + AluY SINE Alu 1 310 -1 186 43 0 0 chr2 18995098 18995121 -234261462 + (GA)n Simple_repeat Simple_repeat 1 23 0 196 237 34 0 chr2 18995331 18995390 -234261193 - L2 LINE L2 -528 2786 2726 450 312 59 10 chr2 18995489 18995691 -234260892 + MLT1J LTR MaLR 3 214 -297 754 253 0 22 chr2 18995794 18996019 -234260564 - L1M4 LINE L1 -1239 4907 4688 409 231 49 107 chr2 18996021 18996264 -234260319 + MER112 DNA MER1_type 25 253 -7 324 307 49 19 chr2 18996580 18996752 -234259831 - MIR SINE MIR -55 207 30 557 194 34 27 chr2 18996917 18997078 -234259505 + MLT1J LTR MaLR 295 511 0 30084 103 16 22 chr2 18998785 19001331 -234255252 + L1PA7 LINE L1 5 2564 -3905 239 0 0 31 chr2 19001331 19001363 -234255220 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 30084 103 16 22 chr2 19001363 19005177 -234251406 + L1PA7 LINE L1 2564 6398 -71 203 61 30 0 chr2 19005177 19005210 -234251373 + (TAAAA)n Simple_repeat Simple_repeat 1 34 0 30084 103 16 22 chr2 19005210 19005221 -234251362 + L1PA7 LINE L1 6398 6408 -61 2269 108 23 0 chr2 19005221 19005527 -234251056 + AluSp SINE Alu 1 313 0 766 247 81 9 chr2 19005534 19005687 -234250896 - L1MD2 LINE L1 -55 6304 6129 * 300 53 0 0 chr2 19005687 19005725 -234250858 + (TG)n Simple_repeat Simple_repeat 2 39 0 766 247 81 9 chr2 19005725 19005794 -234250789 - L1MD2 LINE L1 -230 6129 6066 186 342 108 32 chr2 19006862 19007020 -234249563 + L2 LINE L2 2890 3059 -213 386 352 40 5 chr2 19007788 19007987 -234248596 - MIR SINE MIR -1 261 56 710 234 114 26 chr2 19010384 19010554 -234246029 - MIR SINE MIR -8 254 58 2130 161 72 15 chr2 19010554 19010957 -234245626 - MSTB LTR MaLR 0 426 1 710 234 114 26 chr2 19010957 19011013 -234245570 - MIR SINE MIR -204 58 8 313 301 59 65 chr2 19011067 19011253 -234245330 - L3 LINE CR1 -146 1431 1247 443 266 96 0 chr2 19011437 19011666 -234244917 + L1ME4a LINE L1 5675 5925 -196 372 197 239 0 chr2 19012142 19012259 -234244324 + MER53 DNA DNA 38 182 -7 2406 85 7 0 chr2 19012587 19012893 -234243690 + AluY SINE Alu 4 311 0 226 259 304 0 chr2 19013630 19013742 -234242841 - MIR SINE MIR -109 153 8 310 344 90 33 chr2 19013886 19014130 -234242453 - L2 LINE L2 -631 2683 2426 236 227 45 80 chr2 19016063 19016151 -234240432 - L2 LINE L2 0 3313 3229 872 338 83 28 chr2 19016363 19017038 -234239545 - L2 LINE L2 -376 2938 2227 194 233 0 23 chr2 19017336 19017379 -234239204 + L2 LINE L2 3222 3263 -9 292 247 0 12 chr2 19017423 19017504 -234239079 + L3 LINE CR1 1444 1523 -54 236 308 164 27 chr2 19017792 19017938 -234238645 + MIR3 SINE MIR 41 206 -2 233 265 91 83 chr2 19018074 19018206 -234238377 - MIR SINE MIR -109 153 21 263 279 0 0 chr2 19019105 19019173 -234237410 + HERVL LTR ERVL 4778 4845 -809 264 276 40 13 chr2 19019972 19020048 -234236535 + L2 LINE L2 3191 3268 -4 231 227 7 40 chr2 19020051 19020201 -234236382 + GA-rich Low_complexity Low_complexity 4 148 0 1026 142 0 17 chr2 19020353 19020641 -234235942 + (GGAA)n Simple_repeat Simple_repeat 4 284 0 398 355 33 0 chr2 19021654 19021806 -234234777 + MIR3 SINE MIR 29 185 -23 2310 97 3 0 chr2 19022499 19022799 -234233784 - AluSg SINE Alu -9 301 1 911 20 0 0 chr2 19022808 19022957 -234233626 - AluYb8 SINE Alu 0 336 188 471 135 0 0 chr2 19024358 19024432 -234232151 + LTR32 LTR ERVL 15 88 -383 1217 157 12 44 chr2 19024447 19024695 -234231888 + LTR32 LTR ERVL 232 471 0 500 353 45 0 chr2 19025246 19025447 -234231136 + MIR SINE MIR 50 259 -3 225 238 30 38 chr2 19026597 19026689 -234229894 - MIR SINE MIR -59 149 52 32 75 0 0 chr2 19026824 19026891 -234229692 + AT_rich Low_complexity Low_complexity 1 67 0 30 0 0 0 chr2 19027272 19027302 -234229281 + AT_rich Low_complexity Low_complexity 1 30 0 393 225 136 78 chr2 19027468 19027659 -234228924 - MIR SINE MIR -11 251 50 273 151 0 0 chr2 19030093 19030146 -234226437 + (CA)n Simple_repeat Simple_repeat 2 54 0 564 237 96 6 chr2 19030668 19030845 -234225738 - MER3 DNA MER1_type -2 207 15 252 296 38 75 chr2 19031569 19031728 -234224855 + MIR SINE MIR 54 206 -56 242 368 39 26 chr2 19032635 19032790 -234223793 + MIR SINE MIR 20 176 -86 215 319 0 0 chr2 19034203 19034275 -234222308 + L2 LINE L2 3242 3313 0 3092 188 79 17 chr2 19034559 19035340 -234221243 + L1MB2 LINE L1 5340 6169 -2 21 0 0 0 chr2 19035367 19035388 -234221195 + AT_rich Low_complexity Low_complexity 1 21 0 1931 142 25 0 chr2 19035613 19035910 -234220673 - AluSx SINE Alu 0 306 3 228 208 228 10 chr2 19035950 19036051 -234220532 - L1ME LINE L1 -425 5696 5574 35 0 0 0 chr2 19036440 19036475 -234220108 + AT_rich Low_complexity Low_complexity 1 35 0 547 256 71 50 chr2 19036698 19036936 -234219647 - MIR SINE MIR -18 244 2 686 291 14 38 chr2 19037560 19037770 -234218813 - MIR SINE MIR -45 217 13 194 103 0 26 chr2 19038494 19038533 -234218050 + (TAAAAA)n Simple_repeat Simple_repeat 4 41 0 687 196 78 7 chr2 19040369 19040522 -234216061 - MER96 DNA MER1_type? 0 175 12 272 389 51 5 chr2 19044992 19045208 -234211375 + L2 LINE L2 2631 2856 -458 405 313 17 0 chr2 19045342 19045457 -234211126 + L2 LINE L2 3143 3259 -13 330 304 50 44 chr2 19045480 19045661 -234210922 + L2 LINE L2 3118 3299 -14 646 254 85 10 chr2 19045785 19045986 -234210597 + MER58A DNA MER1_type 4 219 -5 352 306 25 0 chr2 19045998 19046119 -234210464 + MIR SINE MIR 138 261 -1 291 309 27 9 chr2 19046328 19046438 -234210145 - MIR SINE MIR -103 159 48 771 298 78 35 chr2 19046613 19047100 -234209483 + L1ME3 LINE L1 5369 5876 -286 23 0 0 0 chr2 19047391 19047414 -234209169 + AT_rich Low_complexity Low_complexity 1 23 0 193 430 37 9 chr2 19047433 19047540 -234209043 - L2 LINE L2 -22 3250 3141 468 0 0 0 chr2 19049276 19049328 -234207255 + (TG)n Simple_repeat Simple_repeat 2 53 0 746 298 25 44 chr2 19051026 19051342 -234205241 + L2 LINE L2 2991 3300 -13 406 211 26 9 chr2 19051363 19051477 -234205106 - MER97b DNA MER1_type? 0 1053 938 30 59 0 0 chr2 19051501 19051552 -234205031 + AT_rich Low_complexity Low_complexity 1 51 0 605 198 101 48 chr2 19051688 19051936 -234204647 - MER97b DNA MER1_type? -194 859 599 255 61 0 0 chr2 19051938 19051971 -234204612 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 5804 208 22 14 chr2 19052032 19053511 -234203072 + L1P LINE L1 3862 5352 -794 5601 111 7 0 chr2 19153511 19154532 -234102051 - L1PA11 LINE L1 -100 6074 5049 545 304 54 38 chr2 19154723 19154963 -234101620 + L3 LINE CR1 1104 1347 -230 587 172 166 0 chr2 19155254 19155423 -234101160 + MER5C DNA MER1_type 128 324 0 27 29 0 0 chr2 19155559 19155593 -234100990 + AT_rich Low_complexity Low_complexity 1 34 0 710 311 43 48 chr2 19155660 19156055 -234100528 + L3 LINE CR1 1128 1520 -57 1766 133 4 8 chr2 19156283 19156538 -234100045 - AluSx SINE Alu -54 258 5 1787 109 0 0 chr2 19156539 19156804 -234099779 - L1P4 LINE L1 -484 5681 5417 1058 123 36 36 chr2 19156804 19156989 -234099594 + L1MA9 LINE L1 6118 6312 0 391 307 86 7 chr2 19157175 19157315 -234099268 - L2 LINE L2 0 3313 3163 270 81 0 0 chr2 19157335 19157372 -234099211 + (TG)n Simple_repeat Simple_repeat 1 37 0 232 215 0 31 chr2 19158849 19158914 -234097669 + (TCCA)n Simple_repeat Simple_repeat 1 63 0 2829 172 47 40 chr2 19159096 19159177 -234097406 - L1MA9 LINE L1 0 6312 6233 207 0 0 0 chr2 19159177 19159200 -234097383 + (TA)n Simple_repeat Simple_repeat 2 24 0 2829 172 47 40 chr2 19159200 19159645 -234096938 - L1MA9 LINE L1 -79 6233 5779 338 0 24 0 chr2 19159645 19159687 -234096896 + (CA)n Simple_repeat Simple_repeat 1 43 0 2829 172 47 40 chr2 19159687 19159751 -234096832 - L1MA9 LINE L1 -533 5779 5717 216 356 111 30 chr2 19159794 19160162 -234096421 - L2 LINE L2 -559 2755 2358 454 230 236 6 chr2 19160173 19160334 -234096249 - MIR SINE MIR -1 261 64 219 278 103 31 chr2 19160612 19160709 -234095874 - L2 LINE L2 -13 3300 3197 831 212 104 0 chr2 19162393 19162592 -234093991 - MIR SINE MIR -10 252 35 180 331 143 19 chr2 19162955 19163109 -234093474 + MIR3 SINE MIR 36 208 0 1963 182 35 30 chr2 19163172 19163719 -234092864 - MLT2A2 LTR ERVL 0 554 1 227 346 98 45 chr2 19164111 19164244 -234092339 + MIR3 SINE MIR 21 160 -48 2115 93 61 0 chr2 19165671 19165951 -234090632 + AluY SINE Alu 1 297 -14 294 143 18 0 chr2 19166221 19166277 -234090306 + L1MA8 LINE L1 6232 6288 -3 25 51 0 0 chr2 19166594 19166633 -234089950 + AT_rich Low_complexity Low_complexity 1 39 0 2198 139 27 3 chr2 19166640 19166977 -234089606 - MER7A DNA MER2_type -1 345 3 279 247 0 0 chr2 19167317 19167390 -234089193 + (CATA)n Simple_repeat Simple_repeat 4 76 0 518 293 93 36 chr2 19167521 19167746 -234088837 + MIR SINE MIR 12 249 -13 226 220 110 33 chr2 19170030 19170121 -234086462 + MIR3 SINE MIR 1 98 -110 339 322 115 6 chr2 19171794 19171968 -234084615 - MIR SINE MIR -48 214 22 199 70 23 23 chr2 19171969 19172012 -234084571 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 30611 101 8 12 chr2 19172027 19172700 -234083883 - L1PA7 LINE L1 0 6154 5479 2250 86 0 30 chr2 19172700 19173002 -234083581 - AluY SINE Alu -18 293 1 30611 101 8 12 chr2 19173002 19177667 -234078916 - L1PA7 LINE L1 -675 5479 845 2303 100 0 0 chr2 19177671 19177970 -234078613 - AluY SINE Alu -12 299 1 189 330 60 20 chr2 19178241 19178341 -234078242 + L2 LINE L2 3150 3253 -19 267 221 116 47 chr2 19178943 19179029 -234077554 + L2 LINE L2 3162 3253 -19 2144 194 145 24 chr2 19179312 19179890 -234076693 + L1MC4 LINE L1 7376 8023 -19 681 274 114 13 chr2 19179943 19180180 -234076403 + MIR SINE MIR 2 262 0 339 323 75 10 chr2 19180243 19180444 -234076139 - MIR SINE MIR -11 251 38 339 305 114 96 chr2 19182505 19182777 -234073806 + L2 LINE L2 2993 3269 -3 237 108 0 0 chr2 19184077 19184114 -234072469 + (CA)n Simple_repeat Simple_repeat 1 37 0 249 211 0 0 chr2 19186582 19186639 -234069944 + (TG)n Simple_repeat Simple_repeat 2 58 0 216 0 0 0 chr2 19186889 19186913 -234069670 + (GA)n Simple_repeat Simple_repeat 2 25 0 876 115 15 0 chr2 19188191 19188321 -234068262 + AluSg/x SINE Alu 177 308 -2 250 210 0 65 chr2 19188345 19188407 -234068176 - MER81 DNA DNA -56 58 1 356 299 98 18 chr2 19188711 19188875 -234067708 + MIR SINE MIR 2 178 -84 2075 132 0 7 chr2 19188930 19189226 -234067357 + AluSc SINE Alu 1 294 -15 207 100 0 0 chr2 19190738 19190768 -234065815 + (TG)n Simple_repeat Simple_repeat 1 30 0 205 195 0 24 chr2 19190768 19190809 -234065774 + (CATA)n Simple_repeat Simple_repeat 1 40 0 180 111 0 0 chr2 19192141 19192168 -234064415 + (TTTTC)n Simple_repeat Simple_repeat 3 29 0 379 24 0 0 chr2 19192586 19192628 -234063955 - THE1B LTR MaLR 0 364 323 3051 50 3 8 chr2 19192679 19193039 -234063544 - L1PA7 LINE L1 -2 6152 5795 2441 91 9 26 chr2 19193185 19193526 -234063057 - THE1B LTR MaLR -29 335 1 225 299 39 13 chr2 19193610 19193687 -234062896 + Charlie4 DNA MER1_type 1883 1961 0 279 219 84 67 chr2 19193733 19193852 -234062731 - MIR SINE MIR -130 132 12 692 256 12 12 chr2 19193982 19194150 -234062433 + MER5B DNA MER1_type 8 175 -3 206 298 18 0 chr2 19194179 19194236 -234062347 + MIR SINE MIR 24 81 -127 257 235 20 0 chr2 19194494 19194545 -234062038 + L2 LINE L2 3221 3272 0 288 299 130 13 chr2 19195730 19195884 -234060699 - MIR SINE MIR -4 258 87 309 206 58 90 chr2 19196878 19197033 -234059550 - L1M4 LINE L1 -3864 2282 2133 23 68 0 0 chr2 19197693 19197737 -234058846 + AT_rich Low_complexity Low_complexity 1 44 0 381 329 49 28 chr2 19197794 19197937 -234058646 + MER5A DNA MER1_type 43 188 -1 496 274 94 21 chr2 19198215 19198449 -234058134 + MIR SINE MIR 6 256 -6 366 271 172 0 chr2 19199345 19199467 -234057116 + MIR3 SINE MIR 4 146 -62 203 235 0 20 chr2 19199567 19199618 -234056965 + L2 LINE L2 3264 3313 0 370 303 46 13 chr2 19199653 19199805 -234056778 + L2 LINE L2 3116 3272 0 335 172 82 41 chr2 19200096 19200218 -234056365 - L1ME4a LINE L1 -2 6119 5993 * 416 234 121 8 chr2 19200209 19200333 -234056250 - HAL1b LINE L1 -231 1117 980 277 277 209 34 chr2 19200768 19200916 -234055667 - MIR SINE MIR -25 237 64 487 286 50 19 chr2 19200973 19201134 -234055449 - MIR3 SINE MIR -23 185 20 184 277 21 0 chr2 19202711 19202758 -234053825 - L3 LINE CR1 -12 1565 1518 1215 241 93 59 chr2 19202762 19203289 -234053294 - MLT1H LTR MaLR -4 545 1 377 306 62 0 chr2 19204495 19204639 -234051944 - MIR3 SINE MIR -2 206 54 207 239 60 60 chr2 19207425 19207492 -234049091 - L2 LINE L2 -216 3056 2425 253 328 77 31 chr2 19208332 19208527 -234048056 + L2 LINE L2 2553 2756 -558 300 308 38 32 chr2 19208795 19208980 -234047603 + MLT1J2 LTR MaLR 265 450 0 564 236 40 80 chr2 19209551 19209801 -234046782 + MIR SINE MIR 4 243 -19 6598 104 125 54 chr2 19209804 19210998 -234045585 - MER52C LTR ERV1 0 1278 1 295 274 59 0 chr2 19211359 19211461 -234045122 - MIR3 SINE MIR -8 200 93 814 288 49 10 chr2 19211500 19211907 -234044676 + L1ME4a LINE L1 5518 5940 -181 1980 141 35 0 chr2 19212017 19212301 -234044282 - AluSx SINE Alu -18 294 1 590 271 66 11 chr2 19212529 19212710 -234043873 + MIR SINE MIR 20 210 -52 978 194 188 53 chr2 19212711 19212991 -234043592 - MSTC LTR MaLR 0 428 83 2775 96 3 5 chr2 19212991 19213367 -234043216 + THE1C LTR MaLR 1 375 0 978 194 188 53 chr2 19213367 19213463 -234043120 - MSTC LTR MaLR -345 83 1 201 226 0 0 chr2 19214047 19214100 -234042483 + (TA)n Simple_repeat Simple_repeat 2 54 0 285 217 15 13 chr2 19214256 19214330 -234042253 - MER5A DNA MER1_type -44 145 61 384 353 30 8 chr2 19214861 19214994 -234041589 - MIR SINE MIR -125 137 2 30 27 0 0 chr2 19217195 19217232 -234039351 + AT_rich Low_complexity Low_complexity 1 37 0 305 250 0 0 chr2 19218565 19218633 -234037950 + MIR SINE MIR 80 147 -115 251 313 94 23 chr2 19218923 19219051 -234037532 + L2 LINE L2 3136 3272 0 792 306 16 4 chr2 19219231 19219484 -234037099 - MIR SINE MIR -4 258 5 256 358 11 11 chr2 19220371 19220466 -234036117 - MIR SINE MIR -76 132 38 1288 197 10 33 chr2 19220646 19220945 -234035638 - L1MB7 LINE L1 -16 6168 5877 1196 136 90 3 chr2 19220950 19221251 -234035332 - L1PBa LINE L1 -4241 2622 2296 321 65 0 0 chr2 19221418 19221464 -234035119 - L1MB7 LINE L1 -262 5922 5877 * 10179 108 119 18 chr2 19221454 19223280 -234033303 - L1PBa LINE L1 -4219 2644 634 1157 138 10 0 chr2 19223280 19223476 -234033107 - L1PBa LINE L1 -6663 200 3 4693 245 55 26 chr2 19223489 19225945 -234030638 - L1M4 LINE L1 -2143 4239 1619 559 249 30 6 chr2 19225924 19226089 -234030494 - L1MB8 LINE L1 -6 6408 6240 * 1334 261 53 69 chr2 19226268 19226873 -234029710 + MLT1G LTR MaLR 1 590 0 807 203 31 6 chr2 19226875 19227038 -234029545 + MIR SINE MIR 87 253 -9 277 197 15 61 chr2 19228195 19228261 -234028322 + L2 LINE L2 3210 3272 0 293 363 73 50 chr2 19228779 19229307 -234027276 - L2 LINE L2 0 3272 2736 260 312 0 0 chr2 19230819 19230896 -234025687 + MIR SINE MIR 79 155 -107 189 154 0 0 chr2 19231593 19231632 -234024951 + (CA)n Simple_repeat Simple_repeat 1 39 0 22 0 0 0 chr2 19232620 19232642 -234023941 + AT_rich Low_complexity Low_complexity 1 22 0 807 164 6 38 chr2 19232960 19233143 -234023440 - L1MA9 LINE L1 0 6312 6136 928 180 60 0 chr2 19233144 19233361 -234023222 - L1MA9 LINE L1 -484 5828 5599 180 0 0 0 chr2 19234680 19234700 -234021883 + (TGAA)n Simple_repeat Simple_repeat 4 23 0 183 42 0 0 chr2 19234752 19234776 -234021807 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 1034 330 102 45 chr2 19234782 19235802 -234020781 - L2 LINE L2 -13 3259 2175 375 149 0 0 chr2 19235945 19236019 -234020564 + (TG)n Simple_repeat Simple_repeat 2 75 0 285 314 57 9 chr2 19237428 19237533 -234019050 - L2 LINE L2 -25 3247 3138 4967 123 44 4 chr2 19237666 19239280 -234017303 - L1PA16 LINE L1 -2 6164 4531 450 324 80 27 chr2 19239394 19239619 -234016964 + L3 LINE CR1 1297 1533 -44 466 345 100 43 chr2 19241245 19242037 -234014546 - L2 LINE L2 -468 2846 2010 387 288 207 18 chr2 19242067 19242644 -234013939 + L2 LINE L2 2475 3142 -171 306 250 48 12 chr2 19242655 19242739 -234013844 - MIR SINE MIR -21 241 155 277 220 195 0 chr2 19242740 19242858 -234013725 - MLT2E LTR ERVL 0 628 488 366 289 35 28 chr2 19242951 19243093 -234013490 - MLT2E LTR ERVL -456 172 30 474 300 27 7 chr2 19243140 19243290 -234013293 - MIR SINE MIR -105 157 5 219 320 0 0 chr2 19243335 19243385 -234013198 + L2 LINE L2 3203 3252 -20 1021 158 0 6 chr2 19243517 19243700 -234012883 + L1PB1 LINE L1 3 184 -6679 * 13826 187 20 11 chr2 19243686 19245205 -234011378 + L1PB1 LINE L1 1894 3398 -3469 2163 139 3 0 chr2 19245205 19245515 -234011068 + AluSq SINE Alu 1 311 -2 13826 187 20 11 chr2 19245515 19248874 -234007709 + L1PB1 LINE L1 3398 6867 0 1114 262 37 13 chr2 19249343 19249824 -234006759 - L1ME3 LINE L1 -106 6056 5476 595 213 33 81 chr2 19250027 19250238 -234006345 - L1ME2 LINE L1 -8 6156 5956 189 296 19 0 chr2 19250847 19250901 -234005682 + MIR SINE MIR 85 139 -69 189 296 19 0 chr2 19252211 19252265 -234004318 + MIR SINE MIR 85 139 -69 590 314 120 20 chr2 19253154 19253511 -234003072 - HAL1 LINE L1 -1317 1190 798 1059 188 95 67 chr2 19254059 19254405 -234002178 + MER97b DNA MER1_type? 4 359 -694 * 1697 207 56 11 chr2 19254403 19254848 -234001735 + MER97a DNA MER1_type? 260 724 -170 342 181 96 0 chr2 19254902 19254985 -234001598 + MER97c DNA MER1_type? 1000 1090 0 369 326 86 21 chr2 19255516 19255795 -234000788 - MARNA DNA Mariner -213 373 77 186 43 0 0 chr2 19257052 19257075 -233999508 + (T)n Simple_repeat Simple_repeat 1 23 0 2613 107 28 26 chr2 19257075 19257497 -233999086 + MSTA LTR MaLR 6 428 0 22 35 0 0 chr2 19258049 19258078 -233998505 + AT_rich Low_complexity Low_complexity 1 29 0 221 98 24 0 chr2 19258322 19258363 -233998220 + (AATAG)n Simple_repeat Simple_repeat 1 42 0 470 197 66 53 chr2 19258365 19258517 -233998066 + L1MCc LINE L1 19 172 -6251 * 713 216 157 37 chr2 19258516 19258867 -233997716 + L1MCc LINE L1 1143 1535 -4888 403 288 33 41 chr2 19258887 19259158 -233997425 + L1MCc LINE L1 1812 2080 -5042 1072 232 32 0 chr2 19259185 19259469 -233997114 + L1MCc LINE L1 3281 3573 -3368 2404 145 44 0 chr2 19259469 19259877 -233996706 - MSTA LTR MaLR 0 428 3 531 194 102 0 chr2 19259949 19260047 -233996536 + FLAM_A SINE Alu 1 108 -34 23 68 0 0 chr2 19260682 19260726 -233995857 + AT_rich Low_complexity Low_complexity 1 44 0 3883 253 154 25 chr2 19261552 19263407 -233993176 + L1ME1 LINE L1 40 2132 -4264 596 205 31 0 chr2 19263405 19263566 -233993017 + L1ME1 LINE L1 5778 5943 -292 * 328 267 67 44 chr2 19263744 19263879 -233992704 + MIR3 SINE MIR 50 187 -21 180 254 0 51 chr2 19264190 19264249 -233992334 + MIR3 SINE MIR 12 67 -141 209 352 34 0 chr2 19264254 19264342 -233992241 + MIR SINE MIR 117 207 -55 201 293 19 66 chr2 19265118 19265224 -233991359 - L2 LINE L2 -215 3057 2957 295 318 36 24 chr2 19265276 19265443 -233991140 - MIR SINE MIR -62 200 30 1843 111 22 15 chr2 19266008 19266278 -233990305 - AluSg SINE Alu -23 287 16 338 310 35 9 chr2 19266312 19266428 -233990155 + MIR3 SINE MIR 83 201 -7 522 254 119 15 chr2 19266463 19266664 -233989919 + MIR SINE MIR 41 262 0 572 281 60 16 chr2 19266699 19266948 -233989635 - MIR SINE MIR 0 262 3 463 306 99 60 chr2 19267473 19267855 -233988728 + L2 LINE L2 2828 3224 -48 219 261 116 93 chr2 19268100 19268368 -233988215 - L2 LINE L2 0 3272 2999 200 246 35 0 chr2 19269592 19269649 -233986934 + CT-rich Low_complexity Low_complexity 2 60 0 310 288 140 54 chr2 19271001 19271223 -233985360 - L2 LINE L2 -208 3064 2824 180 0 0 0 chr2 19271544 19271564 -233985019 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 234 167 0 0 chr2 19273137 19273173 -233983410 - MIR SINE MIR -8 254 219 206 365 26 17 chr2 19273335 19273450 -233983133 - MIR SINE MIR -124 138 23 222 37 0 0 chr2 19273725 19273752 -233982831 + (GAAA)n Simple_repeat Simple_repeat 1 27 0 363 161 0 0 chr2 19274917 19274979 -233981604 - MER3 DNA MER1_type -136 73 12 344 175 0 0 chr2 19275171 19275228 -233981355 + AluS SINE Alu 1 57 -245 402 194 0 0 chr2 19275317 19275384 -233981199 + AluJ/FRAM SINE Alu 219 285 -27 25 51 0 0 chr2 19275413 19275452 -233981131 + AT_rich Low_complexity Low_complexity 1 39 0 351 243 62 97 chr2 19275464 19275608 -233980975 - MIR SINE MIR -61 201 63 5066 177 26 5 chr2 19276808 19278008 -233978575 + L1MA9 LINE L1 4255 5474 -694 200 117 50 17 chr2 19278043 19278103 -233978480 + (TA)n Simple_repeat Simple_repeat 1 62 0 383 207 23 17 chr2 19278130 19278304 -233978279 + (TA)n Simple_repeat Simple_repeat 1 175 0 286 258 0 0 chr2 19278307 19278396 -233978187 + L1MC4 LINE L1 6615 6703 -1339 227 267 0 22 chr2 19278394 19278484 -233978099 - L1MC4 LINE L1 -1339 6703 6616 * 570 138 24 42 chr2 19278510 19278778 -233977805 + (TA)n Simple_repeat Simple_repeat 1 263 0 1447 171 33 0 chr2 19278791 19279065 -233977518 + L1MA9 LINE L1 5492 5774 -538 344 39 0 20 chr2 19279078 19279129 -233977454 + (TA)n Simple_repeat Simple_repeat 2 51 0 1399 147 43 0 chr2 19279199 19279216 -233977367 + L1MA9 LINE L1 5776 5791 -521 270 0 0 0 chr2 19279216 19279246 -233977337 + (CA)n Simple_repeat Simple_repeat 1 30 0 1399 147 43 0 chr2 19279246 19279486 -233977097 + L1MA9 LINE L1 5791 6044 -268 814 175 83 70 chr2 19279587 19279901 -233976682 + L1MA10 LINE L1 6017 6334 0 2243 106 3 7 chr2 19281815 19282118 -233974465 - AluSx SINE Alu -10 302 1 262 287 126 0 chr2 19282443 19282530 -233974053 + MIR SINE MIR 57 154 -108 2653 129 21 21 chr2 19282918 19283343 -233973240 + MSTC LTR MaLR 4 428 0 395 281 118 0 chr2 19283445 19283580 -233973003 - L2 LINE L2 0 3313 3163 2463 114 7 42 chr2 19285827 19286231 -233970352 - MLT1B LTR MaLR 0 390 1 739 236 19 0 chr2 19286546 19286703 -233969880 - MER58A DNA MER1_type -25 199 40 229 329 40 13 chr2 19286707 19286783 -233969800 - MIR3 SINE MIR -125 83 6 232 302 0 0 chr2 19286890 19286943 -233969640 - MER58A DNA MER1_type -171 53 1 497 288 177 32 chr2 19287534 19287941 -233968642 - L2 LINE L2 -13 3300 2835 261 300 117 17 chr2 19290838 19290958 -233965625 - MER5A DNA MER1_type -49 140 9 424 319 104 22 chr2 19291185 19291367 -233965216 + L3 LINE CR1 1007 1203 -374 1048 279 71 57 chr2 19291449 19292115 -233964468 + HAL1 LINE L1 110 784 -1723 744 260 150 26 chr2 19292158 19292617 -233963966 + MLT1G1 LTR MaLR 72 587 -3 1270 0 0 0 chr2 19292790 19292928 -233963655 + AluYa5/8 SINE Alu 166 303 -8 275 332 66 43 chr2 19294427 19294728 -233961855 - L2 LINE L2 -453 2861 2554 1834 166 5 60 chr2 19295666 19296063 -233960520 + MLT1B LTR MaLR 1 375 -15 467 226 23 45 chr2 19296866 19297043 -233959540 - MER104 DNA Tc2 0 180 8 1793 54 35 139 chr2 19297090 19297406 -233959177 + AluY SINE Alu 29 311 0 288 336 65 0 chr2 19298020 19298127 -233958456 + MIR SINE MIR 77 190 -72 389 289 9 0 chr2 19298221 19298335 -233958248 + LTR33 LTR ERVL 103 217 -304 1807 92 17 4 chr2 19298381 19298620 -233957963 - AluSp SINE Alu -71 242 1 348 254 35 0 chr2 19298628 19298742 -233957841 + LTR33 LTR ERVL 399 516 -5 237 33 0 0 chr2 19300122 19300152 -233956431 + (TG)n Simple_repeat Simple_repeat 1 30 0 302 320 103 21 chr2 19300252 19300349 -233956234 + MIR SINE MIR 28 132 -130 1847 142 3 36 chr2 19300350 19300680 -233955903 - MER1B DNA MER1_type 0 339 21 1983 140 71 10 chr2 19300686 19301079 -233955504 - MER31A LTR ERV1 -6 479 63 1829 168 0 3 chr2 19301176 19301461 -233955122 - AluJb SINE Alu -24 288 5 246 295 45 18 chr2 19302345 19302457 -233954126 - MIR3 SINE MIR -25 183 69 22 0 0 0 chr2 19303076 19303098 -233953485 + AT_rich Low_complexity Low_complexity 1 22 0 1849 115 80 3 chr2 19303819 19304107 -233952476 + AluSx SINE Alu 1 310 -2 230 248 96 41 chr2 19305251 19305469 -233951114 + L1MEd LINE L1 874 1103 -5102 331 183 0 0 chr2 19305571 19305631 -233950952 - MER20 DNA MER1_type 0 219 160 822 271 107 60 chr2 19305770 19306256 -233950327 + L1MEd LINE L1 1403 1865 -4531 3046 195 11 7 chr2 19306256 19306816 -233949767 + MER68 LTR ERV1 1 562 0 822 271 107 60 chr2 19306816 19307179 -233949404 + L1MEd LINE L1 1865 2304 -4092 1607 201 0 17 chr2 19307179 19307472 -233949111 + AluJo SINE Alu 17 304 -8 822 271 107 60 chr2 19307472 19307573 -233949010 + L1MEd LINE L1 2304 2399 -3997 328 289 82 0 chr2 19307686 19307880 -233948703 + L1MEd LINE L1 2369 2578 -3637 1704 66 0 0 chr2 19307881 19308107 -233948476 - L1PA8 LINE L1 -35 6137 5912 229 253 51 51 chr2 19308995 19309074 -233947509 - L2 LINE L2 0 3313 3235 1164 165 25 38 chr2 19309691 19310036 -233946547 + MER33 DNA MER1_type 6 324 0 333 0 0 0 chr2 19310162 19310199 -233946384 + (CA)n Simple_repeat Simple_repeat 1 37 0 524 200 164 18 chr2 19311030 19311195 -233945388 + MER5A DNA MER1_type 1 189 0 369 331 51 0 chr2 19314790 19314947 -233941636 - MIR3 SINE MIR -43 165 1 2051 123 53 39 chr2 19315202 19315561 -233941022 - THE1B LTR MaLR 0 364 1 271 149 0 184 chr2 19315986 19316073 -233940510 + MLT1F1 LTR MaLR 49 119 -448 1418 237 169 4 chr2 19316073 19316588 -233939995 + L1MD3 LINE L1 7396 7995 0 274 311 66 42 chr2 19316792 19316959 -233939624 + L2 LINE L2 2100 2270 -1044 1109 218 146 11 chr2 19316975 19317324 -233939259 + MSTD LTR MaLR 1 396 0 279 307 93 80 chr2 19317324 19318060 -233938523 + L2 LINE L2 2295 3037 -235 250 258 16 0 chr2 19318060 19318122 -233938461 - MIR SINE MIR -131 131 69 292 289 158 26 chr2 19319564 19319678 -233936905 - L2 LINE L2 -10 3262 3134 2173 106 116 64 chr2 19320031 19320438 -233936145 + MSTA LTR MaLR 1 428 0 344 271 83 42 chr2 19321274 19321418 -233935165 + MIR3 SINE MIR 1 150 -58 209 302 48 0 chr2 19321462 19321525 -233935058 - MIR SINE MIR -83 125 60 594 279 153 13 chr2 19322332 19322561 -233934022 - MIR SINE MIR 0 262 2 3586 273 70 60 chr2 19322575 19324974 -233931609 - HAL1 LINE L1 -37 2470 47 3804 159 29 45 chr2 19326627 19327104 -233929479 + L1MC3 LINE L1 6908 7391 -394 2280 181 24 2 chr2 19327104 19327523 -233929060 - MSTA LTR MaLR 0 428 1 3804 159 29 45 chr2 19327523 19327912 -233928671 + L1MC3 LINE L1 7391 7785 0 284 173 25 25 chr2 19328136 19328217 -233928366 + (TA)n Simple_repeat Simple_repeat 2 82 0 189 107 0 0 chr2 19329007 19329035 -233927548 + (TTA)n Simple_repeat Simple_repeat 3 30 0 1065 201 5 27 chr2 19329196 19329364 -233927219 - MLT1D LTR MaLR 0 505 342 2205 133 19 30 chr2 19329364 19329732 -233926851 - THE1B LTR MaLR 0 364 1 1065 201 5 27 chr2 19329732 19329787 -233926796 - MLT1D LTR MaLR -163 342 287 311 281 94 0 chr2 19330159 19330255 -233926328 - MIR SINE MIR -102 160 56 192 242 0 91 chr2 19330824 19330890 -233925693 + L2 LINE L2 3210 3269 -3 573 274 11 40 chr2 19331473 19331648 -233924935 + MER5B DNA MER1_type 1 170 -8 852 187 22 0 chr2 19332199 19332338 -233924245 - MER5A DNA MER1_type -47 142 1 2137 92 0 25 chr2 19332454 19332736 -233923847 - AluSx SINE Alu -1 311 37 2017 118 45 0 chr2 19333967 19334254 -233922329 + AluSx SINE Alu 1 300 -12 25 51 0 0 chr2 19334520 19334559 -233922024 + AT_rich Low_complexity Low_complexity 1 39 0 814 279 60 9 chr2 19336731 19337216 -233919367 + L1MDb LINE L1 1117 1663 -4924 479 293 22 87 chr2 19337217 19337491 -233919092 + L1MDb LINE L1 1625 2008 -4528 22 35 0 0 chr2 19337609 19337638 -233918945 + AT_rich Low_complexity Low_complexity 1 29 0 926 169 0 0 chr2 19337984 19338126 -233918457 + AluSg/x SINE Alu 137 278 -34 225 0 0 0 chr2 19338128 19338153 -233918430 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 941 269 18 66 chr2 19338153 19338710 -233917873 + L1MDb LINE L1 2553 3082 -3324 643 183 70 0 chr2 19338712 19338827 -233917756 + FLAM_C SINE Alu 3 125 -18 1051 276 66 22 chr2 19338839 19339488 -233917095 + L1MDb LINE L1 3070 3747 -2659 1907 258 81 30 chr2 19339907 19340866 -233915717 + L1MDb LINE L1 3916 4923 -1483 919 142 74 16 chr2 19340884 19341074 -233915509 - L1MC3 LINE L1 0 7785 7585 428 266 19 44 chr2 19341088 19341246 -233915337 + L1MDb LINE L1 4965 5118 -1288 317 250 83 45 chr2 19341489 19341621 -233914962 - L1MEd LINE L1 -1333 1157 967 325 350 41 36 chr2 19342060 19342423 -233914160 + L1MEc LINE L1 34 398 -5998 1568 208 34 12 chr2 19342423 19342775 -233913808 - MLT1A1 LTR MaLR 0 365 4 299 250 0 37 chr2 19342871 19342979 -233913604 + L1MEc LINE L1 462 565 -5831 233 302 146 19 chr2 19343368 19343573 -233913010 + MIR SINE MIR 32 262 0 207 208 38 19 chr2 19343600 19343653 -233912930 + L2 LINE L2 3205 3258 -14 233 330 21 0 chr2 19343702 19343796 -233912787 + MIR SINE MIR 37 132 -76 29 0 0 0 chr2 19344828 19344857 -233911726 + AT_rich Low_complexity Low_complexity 1 29 0 675 111 52 31 chr2 19344961 19345273 -233911310 + GA-rich Low_complexity Low_complexity 1 318 0 304 302 54 59 chr2 19346100 19346322 -233910261 + L1M4 LINE L1 3417 3637 -2509 442 295 38 21 chr2 19346323 19346611 -233909972 + L1M4 LINE L1 3663 3955 -2191 251 283 105 55 chr2 19346845 19347133 -233909450 - L1ME LINE L1 -1527 4553 4281 1474 206 25 55 chr2 19347133 19347497 -233909086 - MLT1B LTR MaLR -4 386 33 231 36 0 0 chr2 19347497 19347525 -233909058 + (TTA)n Simple_repeat Simple_repeat 2 29 0 1474 206 25 55 chr2 19347525 19347558 -233909025 - MLT1B LTR MaLR -357 33 1 251 283 105 55 chr2 19347558 19347795 -233908788 - L1ME LINE L1 -1799 4281 4002 2680 33 0 0 chr2 19347954 19348255 -233908328 + AluY SINE Alu 1 301 -10 255 231 5 0 chr2 19349542 19349617 -233906966 - L1ME LINE L1 -2193 3887 3811 1215 308 71 41 chr2 19349620 19349866 -233906717 - L1ME LINE L1 -2794 3286 3049 7539 34 0 0 chr2 19349866 19351106 -233905477 - L1PA4 LINE L1 -1 6154 4915 1215 308 71 41 chr2 19351106 19351646 -233904937 - L1ME LINE L1 -3031 3049 2476 359 245 39 0 chr2 19351668 19351770 -233904813 - L1ME LINE L1 -4840 1240 1135 1121 202 40 46 chr2 19351774 19352197 -233904386 - L1ME LINE L1 -5026 1004 631 22 0 0 0 chr2 19353034 19353056 -233903527 + AT_rich Low_complexity Low_complexity 1 22 0 295 199 99 153 chr2 19353123 19353254 -233903329 + MIR SINE MIR 7 130 -132 269 269 15 0 chr2 19353255 19353322 -233903261 + CT-rich Low_complexity Low_complexity 3 70 0 266 306 30 97 chr2 19353674 19353721 -233902862 + L2 LINE L2 3134 3183 -89 1921 159 3 13 chr2 19353721 19354029 -233902554 + AluJo SINE Alu 1 305 -7 266 306 30 97 chr2 19354029 19354115 -233902468 + L2 LINE L2 3183 3258 -14 180 309 49 81 chr2 19354121 19354244 -233902339 + MIR SINE MIR 110 228 -34 1978 118 48 3 chr2 19354438 19354727 -233901856 - AluSg SINE Alu -8 302 1 2475 78 3 0 chr2 19355049 19355358 -233901225 + AluY SINE Alu 1 310 -1 1209 189 9 30 chr2 19356692 19356925 -233899658 - AluJo SINE Alu -3 309 82 32 0 0 0 chr2 19359566 19359598 -233896985 + AT_rich Low_complexity Low_complexity 1 32 0 457 323 31 31 chr2 19359691 19359886 -233896697 - MIR SINE MIR -66 196 2 1922 201 31 72 chr2 19359967 19360454 -233896129 + MLT1D LTR MaLR 3 469 -36 299 302 52 48 chr2 19360895 19361358 -233895225 + L1MC/D LINE L1 4390 4854 -1292 345 301 26 21 chr2 19361448 19361641 -233894942 + L1MC/D LINE L1 4860 5053 -1093 21 36 0 0 chr2 19361752 19361780 -233894803 + AT_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr2 19361907 19361927 -233894656 + (TTTTTG)n Simple_repeat Simple_repeat 3 22 0 32 43 0 0 chr2 19363068 19363114 -233893469 + AT_rich Low_complexity Low_complexity 1 46 0 401 284 67 120 chr2 19363435 19363943 -233892640 + LTR67 LTR ERVL 36 516 -41 741 155 20 147 chr2 19364156 19364408 -233892175 + L1MB8 LINE L1 5901 6120 -58 5035 94 12 1 chr2 19364423 19365115 -233891468 - L1PA13 LINE L1 -23 6140 5442 719 130 110 19 chr2 19365132 19365286 -233891297 + MER53 DNA DNA 22 189 0 591 241 21 7 chr2 19365742 19365883 -233890700 - MLT1G1 LTR MaLR -447 148 6 311 243 91 62 chr2 19366539 19366815 -233889768 + L1 LINE L1 4042 4325 -1821 21 0 0 0 chr2 19367479 19367500 -233889083 + AT_rich Low_complexity Low_complexity 1 21 0 1273 245 21 34 chr2 19367797 19368205 -233888378 + L1MC/D LINE L1 5265 5642 -2166 227 101 29 58 chr2 19369621 19369690 -233886893 + (TA)n Simple_repeat Simple_repeat 2 68 0 2326 111 0 0 chr2 19370072 19370379 -233886204 + AluSg SINE Alu 1 307 -3 21 36 0 0 chr2 19370613 19370641 -233885942 + AT_rich Low_complexity Low_complexity 1 28 0 213 39 0 0 chr2 19370690 19370716 -233885867 + (TATAA)n Simple_repeat Simple_repeat 3 28 0 211 140 40 0 chr2 19370796 19370846 -233885737 + (ATATG)n Simple_repeat Simple_repeat 3 54 0 43953 50 2 0 chr2 19371383 19377515 -233879068 + L1PA4 LINE L1 11 6154 -1 989 258 53 78 chr2 19377659 19378093 -233878490 + MLT2C2 LTR ERVL 1 423 -41 7340 134 54 17 chr2 19378094 19379299 -233877284 + HSMAR2 DNA Mariner 46 1295 -7 237 132 0 0 chr2 19379299 19379337 -233877246 + (CA)n Simple_repeat Simple_repeat 2 39 0 300 130 0 0 chr2 19379337 19379383 -233877200 + MLT2C2 LTR ERVL 465 510 -10 908 244 71 19 chr2 19380004 19380511 -233876072 + L1ME LINE L1 5003 5533 -631 1336 282 157 27 chr2 19380534 19381119 -233875464 + MLT2F LTR ERVL 1 661 -2 882 179 21 137 chr2 19381153 19381387 -233875196 + Zaphod DNA AcHobo 331 537 -3494 318 301 0 0 chr2 19382015 19382108 -233874475 + MIR3 SINE MIR 113 205 -3 343 294 94 12 chr2 19383110 19383280 -233873303 + MIR3 SINE MIR 15 198 -10 1845 231 90 27 chr2 19385267 19385756 -233870827 + MLT2B1 LTR ERVL 1 520 0 1361 167 40 117 chr2 19386241 19386636 -233869947 + MLT1A1 LTR MaLR 1 365 0 9026 206 10 26 chr2 19386636 19388395 -233868188 + MLT1A1-int LTR MaLR 1 1730 -5 276 77 0 26 chr2 19388401 19388440 -233868143 + MLT1A1 LTR MaLR 1 38 -327 212 128 0 43 chr2 19388441 19388488 -233868095 + (GGAGAA)n Simple_repeat Simple_repeat 6 50 0 487 280 121 78 chr2 19389469 19389815 -233866768 - L2 LINE L2 -10 3262 2902 632 241 54 49 chr2 19390762 19391138 -233865445 - LTR50 LTR ERVL 0 601 326 544 263 58 0 chr2 19391200 19391337 -233865246 - LTR50 LTR ERVL -650 145 1 326 297 35 43 chr2 19391484 19391682 -233864901 - MIR SINE MIR -44 218 19 256 257 99 20 chr2 19393086 19393187 -233863396 + MIR3 SINE MIR 93 201 -7 350 238 50 0 chr2 19394173 19394253 -233862330 - MER5A DNA MER1_type -92 97 14 357 321 48 30 chr2 19394273 19394438 -233862145 + MIR SINE MIR 18 185 -77 481 294 12 29 chr2 19395770 19395940 -233860643 + MER5A DNA MER1_type 2 168 -21 207 0 0 0 chr2 19398026 19398049 -233858534 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 225 94 0 0 chr2 19398856 19398888 -233857695 + (TG)n Simple_repeat Simple_repeat 2 33 0 229 200 0 75 chr2 19402743 19402823 -233853760 + G-rich Low_complexity Low_complexity 3 76 0 315 0 0 0 chr2 19407062 19407097 -233849486 + (TG)n Simple_repeat Simple_repeat 1 35 0 542 161 127 0 chr2 19408636 19408754 -233847829 + MER3 DNA MER1_type 77 209 0 203 158 0 26 chr2 19409653 19409691 -233846892 + C-rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr2 19409957 19409985 -233846598 + AT_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr2 19413155 19413177 -233843406 + (CCCCG)n Simple_repeat Simple_repeat 5 26 0 195 238 86 38 chr2 19414063 19414168 -233842415 + MIR SINE MIR 91 200 -62 1630 181 3 14 chr2 19414717 19415004 -233841579 - AluJb SINE Alu -28 284 1 3266 21 0 0 chr2 19415929 19416305 -233840278 + L1P LINE L1 4900 5275 -871 211 177 32 0 chr2 19416410 19416472 -233840111 + (TA)n Simple_repeat Simple_repeat 2 65 0 21 0 0 0 chr2 19416687 19416708 -233839875 + AT_rich Low_complexity Low_complexity 1 21 0 441 174 54 0 chr2 19417235 19417327 -233839256 - L1MDa LINE L1 -4865 1675 1579 530 289 134 16 chr2 19417415 19417803 -233838780 - L1MC4 LINE L1 -9 8033 7600 834 162 281 21 chr2 19417809 19418044 -233838539 - L1MD2 LINE L1 -3 6356 6061 6113 181 107 47 chr2 19418054 19418628 -233837955 - L1MDa LINE L1 -4244 2296 1758 2111 118 7 0 chr2 19418628 19418916 -233837667 - AluSq SINE Alu -23 290 1 6113 181 107 47 chr2 19418916 19419956 -233836627 - L1MDa LINE L1 -4782 1758 586 273 312 56 11 chr2 19420816 19420951 -233835632 + MIR SINE MIR 28 164 -63 399 298 40 22 chr2 19422525 19422734 -233833849 - MIR SINE MIR -4 258 2 471 303 90 28 chr2 19424851 19425070 -233831513 - L1ME4a LINE L1 0 6121 5917 2051 117 0 3 chr2 19425070 19425380 -233831203 + AluSx SINE Alu 1 309 0 471 303 90 28 chr2 19425380 19425476 -233831107 - L1ME4a LINE L1 -204 5917 5828 2228 203 85 45 chr2 19425476 19426076 -233830507 - MLT1E3 LTR MaLR 0 624 1 471 303 90 28 chr2 19426076 19426145 -233830438 - L1ME4a LINE L1 -293 5828 5709 285 211 90 60 chr2 19426151 19426285 -233830298 - L1P5 LINE L1 -702 5449 5312 510 243 126 0 chr2 19426340 19426451 -233830132 - FLAM_C SINE Alu -17 126 2 398 304 97 34 chr2 19426807 19427156 -233829427 - L1ME4a LINE L1 -1320 4826 4456 1490 238 65 12 chr2 19427205 19427301 -233829282 - L1MC4 LINE L1 -137 7905 7816 2231 123 0 7 chr2 19427301 19427611 -233828972 + AluSx SINE Alu 2 309 -3 1490 238 65 12 chr2 19427611 19427913 -233828670 - L1MC4 LINE L1 -226 7816 7486 702 286 43 18 chr2 19427966 19428221 -233828362 - MIR SINE MIR -1 261 2 194 263 26 40 chr2 19428307 19428383 -233828200 + MIR SINE MIR 59 133 -129 * 322 243 144 36 chr2 19428372 19428483 -233828100 - L2 LINE L2 0 3313 3191 278 304 74 0 chr2 19428487 19428622 -233827961 + MIR SINE MIR 117 261 -1 249 33 0 0 chr2 19430132 19430162 -233826421 + (TG)n Simple_repeat Simple_repeat 1 30 0 224 77 26 0 chr2 19430165 19430204 -233826379 + (TA)n Simple_repeat Simple_repeat 2 41 0 399 73 0 0 chr2 19431275 19431330 -233825253 + (TG)n Simple_repeat Simple_repeat 2 56 0 29 70 0 0 chr2 19431544 19431601 -233824982 + AT_rich Low_complexity Low_complexity 1 57 0 244 277 92 59 chr2 19431601 19431720 -233824863 + MIR SINE MIR 140 262 0 280 254 17 0 chr2 19432699 19432758 -233823825 - L2 LINE L2 0 3272 3213 587 282 41 6 chr2 19432777 19432947 -233823636 + L2 LINE L2 2592 2767 -547 * 1005 301 82 10 chr2 19432941 19433323 -233823260 - L2 LINE L2 -724 2590 2178 543 56 37 19 chr2 19433323 19433430 -233823153 + (TAGA)n Simple_repeat Simple_repeat 2 110 0 443 305 7 26 chr2 19433459 19433610 -233822973 - L2 LINE L2 -1405 1909 1762 226 252 61 69 chr2 19433867 19433998 -233822585 - MIR SINE MIR -1 261 132 23 0 0 0 chr2 19435075 19435098 -233821485 + AT_rich Low_complexity Low_complexity 1 23 0 236 300 29 0 chr2 19435407 19435477 -233821106 + CT-rich Low_complexity Low_complexity 1 72 0 35 0 0 0 chr2 19435477 19435512 -233821071 + AT_rich Low_complexity Low_complexity 1 35 0 333 0 0 0 chr2 19435717 19435754 -233820829 + (TG)n Simple_repeat Simple_repeat 2 38 0 538 203 101 7 chr2 19435827 19435965 -233820618 + MIR SINE MIR 47 197 -65 201 175 0 0 chr2 19437223 19437263 -233819320 + CT-rich Low_complexity Low_complexity 2 41 0 230 293 34 57 chr2 19437329 19437487 -233819096 - MIR SINE MIR -34 174 23 * 319 340 10 10 chr2 19437429 19437532 -233819051 + MIR SINE MIR 10 112 -150 2208 173 8 6 chr2 19437656 19438020 -233818563 + MLT1A1 LTR MaLR 1 365 0 385 260 117 53 chr2 19438020 19438362 -233818221 - L1ME LINE L1 -488 5674 5311 2246 101 3 3 chr2 19439840 19440148 -233816435 - AluY SINE Alu -3 308 1 207 0 0 0 chr2 19440762 19440785 -233815798 + (TTG)n Simple_repeat Simple_repeat 2 24 0 521 238 122 24 chr2 19440797 19440961 -233815622 - MER5A DNA MER1_type 0 189 10 36 40 0 0 chr2 19442685 19442735 -233813848 + AT_rich Low_complexity Low_complexity 1 50 0 624 295 82 82 chr2 19442813 19443952 -233812631 + L1M4 LINE L1 4243 5381 -765 * 1913 199 14 9 chr2 19443949 19444370 -233812213 + L1PB3 LINE L1 4753 5175 -971 1688 160 0 4 chr2 19444374 19444637 -233811946 + AluSx SINE Alu 13 274 -38 5023 147 38 2 chr2 19444638 19445446 -233811137 + L1PB3 LINE L1 5317 6153 -1 417 306 123 47 chr2 19445464 19445899 -233810684 + L1ME LINE L1 5267 5628 -536 663 92 0 0 chr2 19447410 19447497 -233809086 - L1P LINE L1 -6049 97 11 506 288 30 0 chr2 19448061 19448193 -233808390 - MIR SINE MIR -70 192 57 1007 158 16 22 chr2 19449047 19449231 -233807352 - AluJb SINE Alu -8 304 122 43429 34 23 1 chr2 19449624 19455647 -233800936 - L1PA2 LINE L1 -2 6153 2 195 204 0 0 chr2 19455732 19455776 -233800807 + CT-rich Low_complexity Low_complexity 2 45 0 363 265 81 0 chr2 19456474 19456610 -233799973 + MIR SINE MIR 101 247 -15 1409 110 0 55 chr2 19457093 19457312 -233799271 + AluSq SINE Alu 1 207 -106 348 64 0 0 chr2 19457339 19457386 -233799197 + (TG)n Simple_repeat Simple_repeat 2 48 0 395 250 189 14 chr2 19457580 19457728 -233798855 - MIR SINE MIR -19 243 70 625 250 45 17 chr2 19458405 19458581 -233798002 - MIR SINE MIR -76 186 6 1377 223 63 17 chr2 19458769 19459119 -233797464 + MLT1A2 LTR MaLR 1 593 0 190 293 85 49 chr2 19459141 19459223 -233797360 + L2 LINE L2 3186 3270 -43 305 294 40 89 chr2 19459883 19460186 -233796397 - L3 LINE CR1 -45 1532 1245 272 246 72 0 chr2 19460246 19460315 -233796268 + MER91B DNA MER1_type 3 76 -114 229 324 183 23 chr2 19460393 19460612 -233795971 - L3 LINE CR1 -342 1235 982 269 373 65 0 chr2 19460777 19460930 -233795653 + L2 LINE L2 3104 3266 -6 2524 56 0 37 chr2 19464524 19464846 -233791737 - AluY SINE Alu -1 310 1 425 330 54 27 chr2 19465156 19465377 -233791206 + MIR SINE MIR 20 246 -16 2369 88 7 10 chr2 19465399 19465707 -233790876 - AluSp SINE Alu -6 307 1 186 43 0 0 chr2 19465821 19465844 -233790739 + (TG)n Simple_repeat Simple_repeat 2 24 0 221 292 72 26 chr2 19466537 19466698 -233789885 + MIR SINE MIR 20 188 -62 393 278 25 56 chr2 19466816 19466978 -233789605 - MIR3 SINE MIR -17 191 35 1950 270 96 18 chr2 19467593 19468838 -233787745 - L1MEc LINE L1 -1730 4485 3143 267 284 128 35 chr2 19468834 19468975 -233787608 - L1MEc LINE L1 -4719 1677 1524 * 685 353 19 6 chr2 19468986 19469346 -233787237 + HERVL LTR ERVL 3903 4267 -1387 482 279 60 60 chr2 19469563 19469832 -233786751 + LTR33 LTR ERVL 1 269 -252 276 291 47 0 chr2 19469914 19470000 -233786583 + LTR33 LTR ERVL 298 387 -134 373 238 0 49 chr2 19470194 19470316 -233786267 - MIR SINE MIR -28 234 119 783 256 74 9 chr2 19470417 19470647 -233785936 + MIR SINE MIR 7 251 -11 288 0 0 0 chr2 19472306 19472338 -233784245 + (TC)n Simple_repeat Simple_repeat 2 33 0 261 0 0 0 chr2 19472360 19472389 -233784194 + (GA)n Simple_repeat Simple_repeat 2 30 0 2131 113 3 36 chr2 19472433 19472742 -233783841 + AluSx SINE Alu 1 299 -13 180 311 123 0 chr2 19472789 19472895 -233783688 - L2 LINE L2 0 3313 3195 324 0 0 0 chr2 19475162 19475198 -233781385 + (TG)n Simple_repeat Simple_repeat 2 37 0 5297 118 0 14 chr2 19475684 19477453 -233779130 - L1PA13 LINE L1 0 6163 4398 411 292 7 21 chr2 19479071 19479231 -233777352 + MIR SINE MIR 24 141 -67 886 137 0 7 chr2 19479546 19479699 -233776884 - L1MB1 LINE L1 -291 5898 5747 1850 151 19 35 chr2 19479699 19480069 -233776514 + L1MA9 LINE L1 5947 6312 0 201 340 111 30 chr2 19480229 19480373 -233776210 + L2 LINE L2 3032 3204 -109 14697 127 8 0 chr2 19480373 19481427 -233775156 + L1PA8 LINE L1 2954 3998 -2174 2367 85 0 38 chr2 19481427 19481746 -233774837 + AluY SINE Alu 1 307 -4 14697 127 8 0 chr2 19481746 19483920 -233772663 + L1PA8 LINE L1 3998 6167 -5 201 340 111 30 chr2 19483920 19484010 -233772573 + L2 LINE L2 3204 3285 -28 1748 165 3 26 chr2 19484747 19485050 -233771533 - AluJo SINE Alu -16 296 1 411 312 124 24 chr2 19485192 19485522 -233771061 - LTR33 LTR ERVL -57 464 102 241 341 38 15 chr2 19486371 19486503 -233770080 - MIR3 SINE MIR -15 193 59 848 328 19 0 chr2 19486905 19487161 -233769422 - MIR SINE MIR 0 262 2 836 169 27 126 chr2 19487284 19487545 -233769038 + L1PA15 LINE L1 5931 6165 0 487 242 44 50 chr2 19487946 19488128 -233768455 + MIR3 SINE MIR 16 196 -12 272 292 31 54 chr2 19488751 19488881 -233767702 - MIR SINE MIR -64 144 18 1954 161 8 40 chr2 19488926 19489280 -233767303 - MER61A LTR ERV1 0 343 1 533 276 63 23 chr2 19489730 19489904 -233766679 + MIR SINE MIR 2 182 -80 758 63 0 0 chr2 19489953 19490048 -233766535 + AluSc SINE Alu 1 95 -214 1390 105 21 0 chr2 19490187 19490377 -233766206 + AluSg/x SINE Alu 99 292 -20 237 146 24 61 chr2 19491262 19491298 -233765285 + (CATA)n Simple_repeat Simple_repeat 1 37 -388 2561 65 0 31 chr2 19491298 19491620 -233764963 + AluSq SINE Alu 1 312 -1 237 146 24 61 chr2 19491620 19491704 -233764879 + (CATA)n Simple_repeat Simple_repeat 37 425 0 5087 164 17 25 chr2 19491770 19493320 -233763263 - L1MA4 LINE L1 0 6300 4766 559 298 85 29 chr2 19493493 19494009 -233762574 - L1MC/D LINE L1 -2002 5806 5262 379 280 9 9 chr2 19494173 19494280 -233762303 - MER5A DNA MER1_type -79 110 4 515 267 83 24 chr2 19495102 19495344 -233761239 + MLT1J1 LTR MaLR 1 250 -200 242 306 83 0 chr2 19497047 19497155 -233759428 - L2 LINE L2 0 3313 3197 600 313 28 0 chr2 19499517 19499696 -233756887 + MIR SINE MIR 78 261 -1 3619 151 39 0 chr2 19499727 19500363 -233756220 - L1MC1 LINE L1 -1 6332 5672 7369 30 4 0 chr2 19500979 19502207 -233754376 - L1PA4 LINE L1 -4 6151 4917 2224 45 0 0 chr2 19502209 19502498 -233754085 + L1PA4 LINE L1 4605 4893 -1253 217 318 0 71 chr2 19502949 19503075 -233753508 + MIR3 SINE MIR 63 179 -29 5634 119 6 4 chr2 19503149 19504064 -233752519 - L1PB2 LINE L1 -3 6148 5232 194 241 111 65 chr2 19504782 19504890 -233751693 - MIR SINE MIR -51 211 99 212 257 14 68 chr2 19505720 19505794 -233750789 - MIR SINE MIR -104 158 89 207 0 0 0 chr2 19506155 19506178 -233750405 + (T)n Simple_repeat Simple_repeat 1 23 0 231 237 26 26 chr2 19506395 19506471 -233750112 - L2 LINE L2 -4 3268 3193 182 310 0 0 chr2 19506593 19506651 -233749932 - L2 LINE L2 -555 2759 2702 5935 45 8 12 chr2 19506660 19507314 -233749269 - L1PA7 LINE L1 -16 6138 5486 2199 93 0 35 chr2 19507314 19507625 -233748958 - AluY SINE Alu -11 300 1 5935 45 8 12 chr2 19507625 19507747 -233748836 - L1PA7 LINE L1 -668 5486 5365 1045 101 30 0 chr2 19507738 19507907 -233748676 + L1PA7 LINE L1 5201 5374 -772 * 204 316 161 35 chr2 19508022 19508364 -233748219 - L2 LINE L2 -825 2489 2105 186 133 0 0 chr2 19509364 19509394 -233747189 + (ATGGTG)n Simple_repeat Simple_repeat 6 35 0 305 214 29 57 chr2 19511416 19511486 -233745097 + MLT1K LTR MaLR 179 246 -342 509 265 174 10 chr2 19512215 19512411 -233744172 - MIR SINE MIR -25 237 10 26 0 0 0 chr2 19512418 19512444 -233744139 + AT_rich Low_complexity Low_complexity 1 26 0 404 169 0 26 chr2 19512900 19512977 -233743606 + L1MA6 LINE L1 6226 6300 0 25 0 0 0 chr2 19512993 19513018 -233743565 + AT_rich Low_complexity Low_complexity 1 25 0 357 285 97 21 chr2 19514278 19514422 -233742161 - MIR3 SINE MIR -13 195 41 2046 141 3 0 chr2 19515470 19515769 -233740814 + AluSx SINE Alu 1 300 -12 396 259 107 8 chr2 19515828 19515959 -233740624 - MLT1H LTR MaLR 0 549 406 180 0 0 0 chr2 19515990 19516010 -233740573 + (TC)n Simple_repeat Simple_repeat 2 21 0 * 450 0 0 0 chr2 19516009 19516059 -233740524 + (TG)n Simple_repeat Simple_repeat 1 50 0 433 227 0 0 chr2 19516130 19516218 -233740365 - MLT1H LTR MaLR -381 168 81 1924 186 194 16 chr2 19517634 19518063 -233738520 - MLT1D LTR MaLR 0 505 1 432 190 5 9 chr2 19518194 19518301 -233738282 + L1MA9 LINE L1 6187 6291 0 2036 42 0 8 chr2 19519506 19519746 -233736837 + L1PA4 LINE L1 5917 6154 -1 510 220 62 14 chr2 19520628 19520783 -233735800 - MER5A DNA MER1_type -8 170 5 2144 129 0 25 chr2 19521197 19521515 -233735068 + AluSx SINE Alu 2 311 -1 218 327 45 36 chr2 19521698 19521808 -233734775 - L2 LINE L2 -4 3268 3158 298 252 157 34 chr2 19524570 19524717 -233731866 - MIR3 SINE MIR -4 204 40 486 49 0 0 chr2 19525260 19525321 -233731262 + (TG)n Simple_repeat Simple_repeat 1 61 0 183 345 103 9 chr2 19527163 19527279 -233729304 - L2 LINE L2 0 3272 3146 426 213 11 21 chr2 19527466 19527560 -233729023 + MER96 DNA MER1_type? 1 93 -82 255 262 145 14 chr2 19527591 19527736 -233728847 + MIR SINE MIR 98 261 -1 515 275 84 48 chr2 19527880 19528131 -233728452 + MIR SINE MIR 3 262 0 2190 116 17 0 chr2 19528384 19528685 -233727898 + AluSq SINE Alu 1 306 -7 31 68 0 0 chr2 19528711 19528770 -233727813 + AT_rich Low_complexity Low_complexity 1 59 0 647 136 19 39 chr2 19528792 19528895 -233727688 - FLAM_A SINE Alu -21 121 21 315 71 0 0 chr2 19529641 19529683 -233726900 + (TGAA)n Simple_repeat Simple_repeat 1 42 0 2189 125 7 0 chr2 19530795 19531098 -233725485 - AluSx SINE Alu -7 305 1 373 234 65 19 chr2 19531268 19531375 -233725208 - MIR SINE MIR -148 114 3 602 307 120 26 chr2 19531600 19532092 -233724491 + L1ME4a LINE L1 5582 6119 -2 347 291 0 0 chr2 19533563 19533666 -233722917 + MIR SINE MIR 137 239 -23 208 344 16 0 chr2 19534833 19534897 -233721686 - L2 LINE L2 -82 3190 3126 309 283 133 9 chr2 19535736 19535849 -233720734 - MIR SINE MIR -14 248 122 384 281 82 15 chr2 19537781 19537916 -233718667 - MIR3 SINE MIR -34 174 31 21 36 0 0 chr2 19538285 19538313 -233718270 + AT_rich Low_complexity Low_complexity 1 28 0 540 179 47 0 chr2 19538375 19538481 -233718102 - MLT1H LTR MaLR -2 547 437 887 280 58 18 chr2 19538549 19538824 -233717759 - MLT1H LTR MaLR -252 297 12 453 279 7 14 chr2 19539576 19539716 -233716867 + MIR SINE MIR 118 256 -6 336 64 0 0 chr2 19540606 19540653 -233715930 + (CA)n Simple_repeat Simple_repeat 2 48 0 1983 269 30 31 chr2 19542088 19542665 -233713918 + MLT1E LTR MaLR 9 584 -9 993 226 34 64 chr2 19542666 19542710 -233713873 - MLT2C2 LTR ERVL 0 464 420 357 24 0 0 chr2 19542710 19542752 -233713831 + (CA)n Simple_repeat Simple_repeat 2 43 0 993 226 34 64 chr2 19542752 19543129 -233713454 - MLT2C2 LTR ERVL -44 420 1 210 37 0 0 chr2 19544185 19544212 -233712371 + (GA)n Simple_repeat Simple_repeat 2 28 0 2123 113 7 0 chr2 19545614 19545933 -233710650 + AluSq SINE Alu 2 313 0 696 277 30 20 chr2 19546184 19546386 -233710197 + MIR SINE MIR 49 252 -10 187 212 40 121 chr2 19547791 19547890 -233708693 - L2 LINE L2 -215 3057 2967 350 281 23 39 chr2 19548562 19548690 -233707893 - MIR SINE MIR -65 143 18 237 319 85 0 chr2 19548734 19548828 -233707755 - MIR SINE MIR -92 170 69 601 50 4 1 chr2 19548828 19548910 -233707673 - MSTA LTR MaLR 0 428 357 11202 40 4 1 chr2 19548910 19550252 -233706331 - L1PA5 LINE L1 -962 5184 3839 8099 29 5 1 chr2 19550252 19551213 -233705370 + L1PA5 LINE L1 5198 6154 0 1680 145 108 65 chr2 19551213 19551565 -233705018 - MSTA LTR MaLR -59 369 3 215 343 0 15 chr2 19551565 19551632 -233704951 - MIR SINE MIR -187 75 10 340 316 150 32 chr2 19551657 19551904 -233704679 + L3 LINE CR1 1290 1565 -12 25 31 0 0 chr2 19553003 19553035 -233703548 + AT_rich Low_complexity Low_complexity 1 32 0 25 51 0 0 chr2 19553223 19553262 -233703321 + AT_rich Low_complexity Low_complexity 1 39 0 183 264 0 19 chr2 19553948 19554001 -233702582 - L2 LINE L2 -1 3312 3261 303 273 65 65 chr2 19554041 19554180 -233702403 + MIR SINE MIR 110 248 -14 1960 146 3 3 chr2 19554491 19554779 -233701804 - AluJb SINE Alu -6 306 19 343 333 0 90 chr2 19554876 19555077 -233701506 - L2 LINE L2 -1 3271 3089 211 292 0 15 chr2 19556539 19556604 -233699979 - L2 LINE L2 -4 3268 3205 281 304 128 49 chr2 19559897 19560203 -233696380 + MLT1L LTR MaLR 148 477 -138 31 44 0 0 chr2 19560439 19560484 -233696099 + AT_rich Low_complexity Low_complexity 1 45 0 4614 30 4 4 chr2 19560484 19561009 -233695574 - L1PA2 LINE L1 0 6155 5631 193 372 149 0 chr2 19561687 19561781 -233694802 - L2 LINE L2 -26 3246 3139 778 229 19 0 chr2 19561996 19562153 -233694430 + Tigger4(Zombi) DNA MER2_type 1 160 -2571 * 3342 125 12 14 chr2 19562151 19562662 -233693921 + Tigger4(Zombi) DNA MER2_type 2222 2731 0 2215 256 52 20 chr2 19562662 19563221 -233693362 - MLT1G1 LTR MaLR -16 579 3 4810 230 15 19 chr2 19563222 19564620 -233691963 - L1M4 LINE L1 -1947 4199 2807 321 326 35 18 chr2 19565331 19565467 -233691116 - MIR SINE MIR -57 151 11 21 36 0 0 chr2 19565812 19565840 -233690743 + AT_rich Low_complexity Low_complexity 1 28 0 358 320 69 26 chr2 19568506 19568737 -233687846 - L1 LINE L1 -1195 4951 4711 252 252 52 70 chr2 19568783 19569013 -233687570 - L1 LINE L1 -1446 4700 4475 589 275 26 10 chr2 19569160 19569353 -233687230 - LTR33 LTR ERVL 0 521 326 348 211 53 0 chr2 19569536 19569612 -233686971 - LTR33 LTR ERVL -435 86 7 291 316 62 42 chr2 19569626 19569914 -233686669 - L1 LINE L1 -1868 4278 3985 27 49 0 0 chr2 19570045 19570086 -233686497 + AT_rich Low_complexity Low_complexity 1 41 0 280 362 47 24 chr2 19570421 19570548 -233686035 + L2 LINE L2 3184 3313 0 642 304 57 17 chr2 19571461 19571691 -233684892 - MIR SINE MIR -4 258 20 298 316 94 8 chr2 19571825 19571942 -233684641 + L2 LINE L2 3146 3272 0 225 0 0 0 chr2 19572085 19572110 -233684473 + (T)n Simple_repeat Simple_repeat 1 25 0 363 346 74 84 chr2 19574074 19574383 -233682200 - L2 LINE L2 0 3272 2967 4048 248 62 17 chr2 19574464 19575845 -233680738 + L1M4 LINE L1 2798 4240 -1906 1126 168 5 0 chr2 19575868 19576065 -233680518 + L1PB3 LINE L1 3 200 -6663 14095 163 59 26 chr2 19576065 19582085 -233674498 + L1PB3 LINE L1 634 6870 0 2674 153 30 32 chr2 19582163 19582731 -233673852 + L1MC2 LINE L1 5762 6328 -16 268 321 8 61 chr2 19582969 19583100 -233673483 + MIR3 SINE MIR 9 132 -76 1089 196 28 49 chr2 19583155 19583482 -233673101 + MER33 DNA MER1_type 1 320 -4 222 37 0 0 chr2 19584565 19584592 -233671991 + (CA)n Simple_repeat Simple_repeat 2 28 0 450 310 30 84 chr2 19584833 19585130 -233671453 + L2 LINE L2 2992 3272 0 21 0 0 0 chr2 19585988 19586009 -233670574 + AT_rich Low_complexity Low_complexity 1 21 0 186 286 20 0 chr2 19586319 19586368 -233670215 + MER5A DNA MER1_type 4 53 -136 292 316 187 0 chr2 19587344 19587499 -233669084 + MIR SINE MIR 36 219 -43 21 71 0 0 chr2 19588423 19588465 -233668118 + AT_rich Low_complexity Low_complexity 1 42 0 401 195 8 59 chr2 19588754 19588872 -233667711 - L1MA9 LINE L1 -38 6274 6163 585 200 16 39 chr2 19589783 19589920 -233666663 + MSTC LTR MaLR 1 134 -231 2808 92 97 0 chr2 19589920 19590292 -233666291 + MLT2A2 LTR ERVL 3 420 -33 249 33 0 0 chr2 19590292 19590322 -233666261 + (TA)n Simple_repeat Simple_repeat 2 31 0 2808 92 97 0 chr2 19590322 19590360 -233666223 + MLT2A2 LTR ERVL 420 453 0 585 200 16 39 chr2 19590360 19590379 -233666204 + MSTC LTR MaLR 134 152 -213 1405 122 4 4 chr2 19590379 19590609 -233665974 + L1MA4 LINE L1 5835 6064 -236 1434 194 8 0 chr2 19590622 19590874 -233665709 + AluJb SINE Alu 13 266 -46 240 35 0 0 chr2 19590880 19590909 -233665674 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 1382 139 0 4 chr2 19590910 19591162 -233665421 + L1MA4 LINE L1 6050 6300 0 514 182 74 8 chr2 19591277 19591398 -233665185 + MSTC LTR MaLR 262 390 -6 664 290 101 53 chr2 19592556 19593142 -233663441 - L1ME3A LINE L1 -264 5906 5293 315 360 46 10 chr2 19593152 19593349 -233663234 - L1ME3A LINE L1 -876 5270 5067 20701 30 4 0 chr2 19593828 19597093 -233659490 - L1PA3 LINE L1 -3 6152 2878 20610 40 0 3 chr2 19597094 19599612 -233656971 + L1PA3 LINE L1 374 2884 -3262 4915 180 24 21 chr2 19599745 19601326 -233655257 + L1MA9 LINE L1 4696 6274 -38 181 269 134 60 chr2 19601841 19601975 -233654608 - L2 LINE L2 -160 3112 2969 506 336 16 55 chr2 19602820 19603186 -233653397 - MLT1I LTR MaLR -18 391 40 272 313 148 13 chr2 19603292 19603522 -233653061 + MIR SINE MIR 2 262 0 226 296 70 0 chr2 19603865 19603936 -233652647 + MIR SINE MIR 39 114 -94 444 193 22 92 chr2 19604381 19604609 -233651974 + L1MB1 LINE L1 5115 5326 -820 239 212 61 0 chr2 19604629 19604695 -233651888 + LTR23 LTR ERV1 336 405 -32 335 225 11 49 chr2 19604716 19604832 -233651751 + L1MB1 LINE L1 5321 5436 -726 595 204 17 99 chr2 19604865 19604963 -233651620 + Tigger2 DNA MER2_type 2543 2621 -87 820 146 8 0 chr2 19604963 19605093 -233651490 + FLAM_C SINE Alu 3 133 0 595 204 17 99 chr2 19605093 19605175 -233651408 + Tigger2 DNA MER2_type 2621 2708 0 414 252 19 0 chr2 19605175 19605282 -233651301 + L1ME1 LINE L1 6053 6161 -5 1653 149 69 0 chr2 19605528 19605804 -233650779 - AluJb SINE Alu -12 300 6 7426 179 52 36 chr2 19605809 19607720 -233648863 - L1MC3 LINE L1 -743 5403 4941 342 227 60 60 chr2 19607729 19607879 -233648704 - L1M4 LINE L1 -812 5334 5185 377 300 52 70 chr2 19607976 19608359 -233648224 - L1M4 LINE L1 -978 5168 4793 2440 173 9 19 chr2 19608474 19608937 -233647646 + L1MB1 LINE L1 5559 6016 -152 2387 93 3 51 chr2 19608937 19609312 -233647271 + MER4A LTR ERV1 1 357 -307 2086 142 13 28 chr2 19609284 19609437 -233647146 + MER4A LTR ERV1 176 330 -334 * 2385 166 51 5 chr2 19609437 19609846 -233646737 + MSTA LTR MaLR 1 428 0 8933 175 22 19 chr2 19609846 19611492 -233645091 + MSTA-int LTR MaLR 1 1651 0 2544 128 54 7 chr2 19611492 19611899 -233644684 + MSTA LTR MaLR 1 426 -2 2086 142 13 28 chr2 19611899 19612128 -233644455 + MER4A LTR ERV1 327 664 0 542 142 228 0 chr2 19612128 19612255 -233644328 + L1MB1 LINE L1 6013 6168 0 404 259 87 39 chr2 19612274 19612472 -233644111 - L1M4 LINE L1 -1511 4635 4448 490 9 103 0 chr2 19612472 19612579 -233644004 + (TA)n Simple_repeat Simple_repeat 2 119 0 404 259 87 39 chr2 19612579 19612864 -233643719 - L1M4 LINE L1 -1698 4448 4099 1918 314 113 10 chr2 19613136 19613944 -233642639 - L2 LINE L2 -2389 925 35 315 208 0 83 chr2 19614325 19614421 -233642162 - L1P LINE L1 -2471 3675 3588 714 293 118 48 chr2 19614550 19615068 -233641515 - L1M4 LINE L1 -2644 3502 2949 276 97 39 48 chr2 19615253 19615356 -233641227 + (TA)n Simple_repeat Simple_repeat 2 103 0 196 263 137 11 chr2 19615728 19615823 -233640760 + MIR SINE MIR 124 230 -32 536 0 16 0 chr2 19615919 19615983 -233640600 + (ATATG)n Simple_repeat Simple_repeat 3 67 0 1846 133 105 12 chr2 19615986 19616318 -233640265 + THE1B LTR MaLR 2 364 0 1984 134 13 35 chr2 19616575 19616888 -233639695 - AluSx SINE Alu -6 306 1 423 0 0 0 chr2 19618724 19618771 -233637812 + (TG)n Simple_repeat Simple_repeat 1 47 0 2122 89 6 86 chr2 19621031 19621356 -233635227 - AluSc SINE Alu -10 299 1 362 281 21 0 chr2 19621447 19621543 -233635040 - L1MC4 LINE L1 -1339 6703 6606 305 211 119 9 chr2 19622039 19622148 -233634435 + MER103 DNA DNA 46 166 0 24 0 0 0 chr2 19622311 19622335 -233634248 + AT_rich Low_complexity Low_complexity 1 24 0 288 53 0 0 chr2 19622403 19622441 -233634142 + (CAAA)n Simple_repeat Simple_repeat 1 38 0 486 312 39 13 chr2 19623258 19623412 -233633171 - MIR SINE MIR -98 164 7 529 266 60 64 chr2 19624101 19624162 -233632421 + MIR SINE MIR 12 72 -190 1817 156 0 33 chr2 19624162 19624464 -233632119 - AluSx SINE Alu -20 292 1 529 266 60 64 chr2 19624464 19624620 -233631963 + MIR SINE MIR 72 228 -34 400 280 92 19 chr2 19625254 19625487 -233631096 - L1MC4 LINE L1 -786 5360 5189 383 282 123 43 chr2 19625720 19625939 -233630644 - L1M4 LINE L1 -3201 2945 2690 2566 218 30 32 chr2 19625939 19626564 -233630019 - MLT1E3 LTR MaLR 0 624 1 383 282 123 43 chr2 19626564 19626670 -233629913 - L1M4 LINE L1 -3456 2690 2594 235 111 19 19 chr2 19626808 19626862 -233629721 + (TA)n Simple_repeat Simple_repeat 2 55 0 214 191 24 0 chr2 19627082 19627124 -233629459 + CT-rich Low_complexity Low_complexity 1 43 0 189 0 0 0 chr2 19627141 19627162 -233629421 + (CA)n Simple_repeat Simple_repeat 2 22 0 244 284 84 21 chr2 19627253 19627348 -233629235 + L2 LINE L2 3211 3311 -2 31 44 0 0 chr2 19627448 19627493 -233629090 + AT_rich Low_complexity Low_complexity 1 45 0 580 261 27 49 chr2 19627523 19627707 -233628876 + L2 LINE L2 2564 2743 -571 225 290 16 0 chr2 19627740 19627802 -233628781 - MER94 DNA DNA -2 132 70 187 360 41 29 chr2 19628755 19628927 -233627656 - L2 LINE L2 -173 3099 2926 296 377 33 25 chr2 19629446 19629568 -233627015 + MIR3 SINE MIR 3 125 -83 381 22 0 0 chr2 19630481 19630527 -233626056 + (TG)n Simple_repeat Simple_repeat 1 46 0 456 67 0 0 chr2 19630762 19630822 -233625761 + (CA)n Simple_repeat Simple_repeat 2 61 0 667 173 53 0 chr2 19632315 19632465 -233624118 - L1MA8 LINE L1 -2 6289 6132 207 418 28 14 chr2 19634226 19634367 -233622216 + L2 LINE L2 3128 3270 -2 249 83 0 0 chr2 19635677 19635713 -233620870 + (TC)n Simple_repeat Simple_repeat 2 37 0 21 36 0 0 chr2 19636063 19636091 -233620492 + AT_rich Low_complexity Low_complexity 1 28 0 236 320 53 0 chr2 19636400 19636475 -233620108 - MIR3 SINE MIR -19 189 111 1035 157 103 60 chr2 19636478 19636759 -233619824 + MLT1D LTR MaLR 1 293 -212 202 220 0 51 chr2 19637963 19638022 -233618561 + CT-rich Low_complexity Low_complexity 1 56 0 199 288 70 48 chr2 19638942 19639171 -233617412 + L2 LINE L2 2032 2265 -1049 397 275 124 50 chr2 19639319 19639537 -233617046 + MIR SINE MIR 20 253 -9 1914 126 11 0 chr2 19640159 19640471 -233616112 + AluSx SINE Alu 1 315 0 399 340 7 7 chr2 19641653 19641800 -233614783 + MIR SINE MIR 3 149 -113 1766 109 9 103 chr2 19641860 19642180 -233614403 - AluY SINE Alu -21 290 1 2067 240 96 94 chr2 19642466 19644165 -233612418 + L1MDa LINE L1 52 1754 -4786 1394 158 35 8 chr2 19644192 19644440 -233612143 - MSTB1 LTR MaLR 0 432 178 4202 74 22 36 chr2 19644440 19645584 -233610999 - MER11A LTR ERVK 0 1266 1 1085 128 0 6 chr2 19645584 19645747 -233610836 - MSTB1 LTR MaLR -248 178 17 481 150 0 0 chr2 19645761 19645861 -233610722 + L1MDa LINE L1 2005 2104 -4436 1397 206 110 0 chr2 19645932 19646213 -233610370 + AluJb SINE Alu 1 312 0 238 175 0 32 chr2 19646305 19646368 -233610215 - L1MC4 LINE L1 -1339 6703 6643 * 290 200 33 0 chr2 19646335 19646425 -233610158 + L1MDa LINE L1 2323 2415 -4125 * 12896 158 76 11 chr2 19646415 19650773 -233605810 + L1PB1 LINE L1 453 5163 -1699 216 0 0 0 chr2 19650773 19650797 -233605786 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 12896 158 76 11 chr2 19650797 19651280 -233605303 + L1PB1 LINE L1 5163 5613 -1249 1955 109 138 9 chr2 19651281 19651305 -233605278 + L1PB1 LINE L1 6473 6493 -374 360 0 0 0 chr2 19651305 19651345 -233605238 + (CA)n Simple_repeat Simple_repeat 2 41 0 1955 109 138 9 chr2 19651345 19651669 -233604914 + L1PB1 LINE L1 6493 6866 -1 783 141 7 27 chr2 19651825 19651974 -233604609 + L1MA10 LINE L1 6186 6331 -3 1127 181 54 10 chr2 19651983 19652408 -233604175 + L1MDa LINE L1 2393 2835 -3705 923 168 20 35 chr2 19652533 19652730 -233603853 - L1MD3 LINE L1 -710 7285 7092 893 259 91 53 chr2 19652744 19653250 -233603333 - L1MD3 LINE L1 -1988 5820 5296 2556 121 77 22 chr2 19653598 19654081 -233602502 - L1MA8 LINE L1 0 6291 5779 195 42 0 0 chr2 19654081 19654105 -233602478 + (CA)n Simple_repeat Simple_repeat 2 25 0 2556 121 77 22 chr2 19654105 19654117 -233602466 - L1MA8 LINE L1 -512 5779 5769 878 293 9 19 chr2 19654117 19654434 -233602149 + HsTC2a DNA Tc2 34 347 -397 763 215 45 19 chr2 19654505 19654770 -233601813 + HsTC2a DNA Tc2 471 742 0 361 274 40 8 chr2 19655084 19655208 -233601375 + L1M2b LINE L1 1588 1715 -5494 * 8002 210 36 26 chr2 19655198 19658618 -233597965 + L1M2 LINE L1 789 4244 -2604 335 280 4 17 chr2 19658655 19658776 -233597807 - MLT1I LTR MaLR -208 203 80 796 251 66 29 chr2 19659768 19659899 -233596684 + MER45C DNA AcHobo 14 139 -814 2150 167 82 18 chr2 19659899 19660337 -233596246 + MLT1C LTR MaLR 1 466 -1 796 251 66 29 chr2 19660337 19660448 -233596135 + MER45C DNA AcHobo 139 265 -688 709 223 154 0 chr2 19660518 19660706 -233595877 + MER45C DNA AcHobo 730 946 -7 194 271 140 47 chr2 19662427 19662534 -233594049 - L2 LINE L2 -5 3308 3192 923 294 189 18 chr2 19663101 19664099 -233592484 + L2 LINE L2 2140 3313 0 543 291 20 5 chr2 19664376 19664572 -233592011 - MIR SINE MIR 0 262 64 255 244 89 65 chr2 19664604 19664727 -233591856 + MLT1K LTR MaLR 378 503 -85 237 33 0 0 chr2 19665995 19666025 -233590558 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 734 86 0 0 chr2 19666435 19666540 -233590043 + AluSp/q SINE Alu 207 311 -2 23 0 0 0 chr2 19667858 19667881 -233588702 + AT_rich Low_complexity Low_complexity 1 23 0 333 341 29 59 chr2 19667965 19668238 -233588345 - L2 LINE L2 -2072 1242 978 292 240 115 44 chr2 19668338 19668521 -233588062 - L1ME4a LINE L1 -74 6047 5852 307 287 45 7 chr2 19668553 19668693 -233587890 - MIR SINE MIR -62 146 16 303 282 94 18 chr2 19669324 19669494 -233587089 - MIR SINE MIR -4 258 76 253 302 35 0 chr2 19669813 19669899 -233586684 - MIR3 SINE MIR -6 202 114 2165 128 0 0 chr2 19670100 19670390 -233586193 + AluSx SINE Alu 2 291 -21 195 42 0 0 chr2 19670393 19670417 -233586166 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 457 310 52 54 chr2 19670998 19671421 -233585162 - L2 LINE L2 -1905 1409 912 21 0 0 0 chr2 19672246 19672267 -233584316 + AT_rich Low_complexity Low_complexity 1 21 0 204 308 63 56 chr2 19672401 19672544 -233584039 - MIR SINE MIR -117 145 2 1931 203 57 5 chr2 19673987 19674425 -233582158 + L1MD3 LINE L1 7535 7995 0 403 278 66 54 chr2 19674665 19674924 -233581659 - MIR SINE MIR 0 262 1 198 286 29 14 chr2 19674954 19675024 -233581559 - L2 LINE L2 -24 3248 3178 270 264 9 57 chr2 19675048 19675154 -233581429 - MIR SINE MIR -66 196 96 515 56 99 0 chr2 19675840 19675911 -233580672 + MADE1 DNA Mariner 1 78 -2 192 77 0 0 chr2 19676050 19676076 -233580507 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 243 326 61 99 chr2 19676077 19676390 -233580193 - L2 LINE L2 -15 3257 2957 2302 104 0 0 chr2 19677524 19677822 -233578761 - AluY SINE Alu -13 298 1 230 196 28 75 chr2 19679545 19679652 -233576931 + GA-rich Low_complexity Low_complexity 2 103 0 448 256 100 18 chr2 19680567 19680726 -233575857 + MER5B DNA MER1_type 15 175 -3 221 290 178 0 chr2 19681307 19681414 -233575169 + MIR3 SINE MIR 81 206 -2 219 276 38 29 chr2 19681540 19681645 -233574938 - MIR SINE MIR -109 153 48 235 340 55 63 chr2 19683673 19683911 -233572672 - L2 LINE L2 -3 3269 3034 1470 215 90 54 chr2 19683941 19684387 -233572196 + MLT1C LTR MaLR 6 467 0 274 227 68 34 chr2 19684679 19684767 -233571816 + MLT1K LTR MaLR 142 232 -356 635 161 108 0 chr2 19685254 19685393 -233571190 - MSTC LTR MaLR -244 152 1 6379 235 67 44 chr2 19685393 19685737 -233570846 - MSTD-int LTR MaLR 0 1735 1401 1831 96 69 38 chr2 19685737 19686028 -233570555 - AluSx SINE Alu -8 304 5 6379 235 67 44 chr2 19686028 19687377 -233569206 - MSTD-int LTR MaLR -334 1401 2 1622 192 70 44 chr2 19687379 19687765 -233568818 - MSTD LTR MaLR 0 396 1 333 277 0 64 chr2 19688206 19688347 -233568236 + MIR SINE MIR 86 217 -45 2334 168 33 12 chr2 19689541 19689964 -233566619 + MSTB1 LTR MaLR 1 432 0 415 287 7 21 chr2 19690081 19690224 -233566359 - MIR SINE MIR -54 208 68 2319 105 0 0 chr2 19691118 19691413 -233565170 + AluSp SINE Alu 1 295 -18 225 390 50 7 chr2 19691595 19691736 -233564847 - L3b LINE CR1 -87 1496 1350 39 0 0 0 chr2 19691846 19691885 -233564698 + AT_rich Low_complexity Low_complexity 1 39 0 2170 143 0 83 chr2 19691897 19692295 -233564288 - MLT1A1 LTR MaLR 0 365 1 254 262 82 83 chr2 19692686 19692848 -233563735 - L1ME LINE L1 -426 5744 5583 2332 98 10 0 chr2 19692848 19693153 -233563430 - AluSq SINE Alu -5 308 1 254 262 82 83 chr2 19693153 19693314 -233563269 - L1ME LINE L1 -587 5583 5349 472 298 53 21 chr2 19693344 19693626 -233562957 - L1ME LINE L1 -805 5341 5051 183 297 47 16 chr2 19693782 19693846 -233562737 + MIR SINE MIR 111 176 -86 213 292 15 0 chr2 19695709 19695774 -233560809 + MIR SINE MIR 2 67 -195 2307 120 0 0 chr2 19695880 19696189 -233560394 + AluSx SINE Alu 1 309 -3 24 0 0 0 chr2 19697433 19697457 -233559126 + AT_rich Low_complexity Low_complexity 1 24 0 1394 197 15 4 chr2 19697564 19697833 -233558750 + L1MC1 LINE L1 6061 6332 -1 285 167 0 0 chr2 19698139 19698193 -233558390 + T-rich Low_complexity Low_complexity 1 54 0 952 295 77 19 chr2 19700794 19701106 -233555477 - MER115 DNA AcHobo -329 364 35 316 304 29 0 chr2 19701173 19701275 -233555308 + MIR SINE MIR 35 139 -123 1104 161 32 37 chr2 19702475 19702693 -233553890 - MER20 DNA MER1_type -2 217 1 393 317 34 47 chr2 19702888 19703106 -233553477 - MIR SINE MIR -31 231 11 293 0 0 26 chr2 19704278 19704316 -233552267 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 578 247 47 12 chr2 19704957 19705127 -233551456 + MIR3 SINE MIR 33 208 0 426 85 0 0 chr2 19705916 19705975 -233550608 + (TTA)n Simple_repeat Simple_repeat 2 60 0 261 0 0 0 chr2 19706675 19706704 -233549879 + (TC)n Simple_repeat Simple_repeat 1 29 0 200 360 73 0 chr2 19708772 19708908 -233547675 + L2 LINE L2 2609 2754 -560 237 316 20 46 chr2 19709009 19709161 -233547422 + L2 LINE L2 2895 3042 -230 * 1463 280 245 55 chr2 19709147 19710821 -233545762 + L2 LINE L2 316 2433 -881 288 0 0 0 chr2 19710821 19710853 -233545730 + (CA)n Simple_repeat Simple_repeat 1 32 0 1463 280 245 55 chr2 19710853 19711176 -233545407 + L2 LINE L2 2433 2693 -621 188 0 74 0 chr2 19711176 19711203 -233545380 + (TATATG)n Simple_repeat Simple_repeat 3 31 0 3106 123 10 26 chr2 19711213 19711708 -233544875 - L1MC1 LINE L1 -420 5913 5427 528 302 28 74 chr2 19711709 19712097 -233544486 + L2 LINE L2 2688 3055 -258 559 205 80 113 chr2 19712840 19713079 -233543504 - MER112 DNA MER1_type -13 247 17 299 341 96 15 chr2 19713300 19713435 -233543148 + MIR3 SINE MIR 31 176 -32 1765 181 13 7 chr2 19713694 19714004 -233542579 - AluJb SINE Alu 0 312 1 2293 114 0 19 chr2 19714209 19714526 -233542057 - AluY SINE Alu 0 311 1 533 315 94 16 chr2 19715957 19716211 -233540372 - L3 LINE CR1 -175 1402 1129 1996 188 48 0 chr2 19717854 19718226 -233538357 + MLT1B LTR MaLR 1 390 0 481 312 39 24 chr2 19718386 19718591 -233537992 - MIR SINE MIR -34 228 21 197 254 79 16 chr2 19718937 19719000 -233537583 + MIR3 SINE MIR 135 201 -7 789 171 11 11 chr2 19719425 19719601 -233536982 + G-rich Low_complexity Low_complexity 4 179 0 587 199 13 32 chr2 19719619 19719873 -233536710 + G-rich Low_complexity Low_complexity 1 249 0 312 158 0 0 chr2 19719873 19719930 -233536653 + GA-rich Low_complexity Low_complexity 1 57 0 340 292 168 0 chr2 19720302 19720415 -233536168 + L2 LINE L2 3182 3313 0 2196 139 0 0 chr2 19720873 19721176 -233535407 + AluSx SINE Alu 7 309 -3 577 158 0 0 chr2 19721502 19721597 -233534986 - L1MC3 LINE L1 -492 7293 7199 292 272 43 0 chr2 19721597 19721689 -233534894 - MLT1F1 LTR MaLR -437 130 35 423 136 37 0 chr2 19721689 19721770 -233534813 - L1MC3 LINE L1 -688 7097 7014 2823 179 48 16 chr2 19721774 19722355 -233534228 - L1MC3 LINE L1 -820 6965 6366 1137 272 46 12 chr2 19722358 19722681 -233533902 - MER45C DNA AcHobo -140 813 480 896 204 47 5 chr2 19722678 19722869 -233533714 - MER45C DNA AcHobo -754 199 1 * 359 220 21 99 chr2 19723397 19723563 -233533020 + MIR SINE MIR 97 255 -7 181 307 0 40 chr2 19724470 19724545 -233532038 - L2 LINE L2 -20 3252 3181 645 292 0 0 chr2 19724611 19724779 -233531804 - MIR SINE MIR -14 248 81 857 253 101 34 chr2 19724779 19725167 -233531416 - LTR16B LTR ERVL 0 464 51 227 222 12 123 chr2 19725230 19725311 -233531272 - MIR SINE MIR -187 75 4 388 365 47 28 chr2 19725500 19725714 -233530869 - L2 LINE L2 -89 3183 2966 242 214 0 18 chr2 19725786 19725842 -233530741 - L2 LINE L2 -339 2974 2920 23 0 0 0 chr2 19726564 19726587 -233529996 + AT_rich Low_complexity Low_complexity 1 23 0 266 160 60 0 chr2 19726665 19726715 -233529868 - MLT1G1 LTR MaLR -182 413 361 917 252 20 31 chr2 19726758 19727012 -233529571 - MLT1G1 LTR MaLR -342 253 3 461 275 182 22 chr2 19727693 19727962 -233528621 + MLT1K LTR MaLR 277 588 0 1043 266 68 64 chr2 19729340 19729807 -233526776 - L2 LINE L2 -4 3309 2841 186 298 0 0 chr2 19730786 19730833 -233525750 + MIR SINE MIR 98 144 -64 537 272 90 23 chr2 19731668 19731993 -233524590 + MLT1I LTR MaLR 4 406 -3 423 315 23 15 chr2 19732906 19733036 -233523547 + MIR3 SINE MIR 78 208 0 219 146 0 0 chr2 19733137 19733178 -233523405 + (CA)n Simple_repeat Simple_repeat 2 42 0 186 43 0 0 chr2 19733677 19733700 -233522883 + (CAAT)n Simple_repeat Simple_repeat 2 24 0 * 198 0 0 0 chr2 19733699 19733721 -233522862 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 333 0 0 0 chr2 19733720 19733757 -233522826 + (CA)n Simple_repeat Simple_repeat 1 37 0 329 327 50 0 chr2 19734564 19734665 -233521918 + MIR SINE MIR 40 145 -63 2411 134 0 30 chr2 19735355 19735757 -233520826 + MLT1B LTR MaLR 1 390 0 398 292 46 0 chr2 19735795 19735925 -233520658 - MIR3 SINE MIR -8 200 65 1838 149 27 7 chr2 19736762 19737057 -233519526 - AluSx SINE Alu -11 301 1 912 355 112 23 chr2 19738856 19739608 -233516975 + L1M4 LINE L1 3705 4523 -1623 180 276 0 69 chr2 19739707 19739765 -233516818 + L3 LINE CR1 1413 1466 -111 21 36 0 0 chr2 19740164 19740192 -233516391 + AT_rich Low_complexity Low_complexity 1 28 0 547 221 0 47 chr2 19740407 19740534 -233516049 + L2 LINE L2 3193 3313 0 310 293 162 39 chr2 19740541 19740800 -233515783 - L1M4 LINE L1 -786 5360 5070 425 331 15 15 chr2 19741691 19741821 -233514762 - MIR SINE MIR -121 141 12 474 248 19 0 chr2 19741823 19741928 -233514655 - MER81 DNA DNA 0 114 8 1234 174 70 52 chr2 19741929 19742284 -233514299 - MSTA LTR MaLR -2 426 3 201 94 0 0 chr2 19742356 19742388 -233514195 + (TC)n Simple_repeat Simple_repeat 2 33 0 465 295 31 81 chr2 19743636 19743894 -233512689 - MIR SINE MIR 0 262 18 240 35 0 0 chr2 19745317 19745346 -233511237 + (CAA)n Simple_repeat Simple_repeat 2 30 0 2156 146 3 0 chr2 19746006 19746315 -233510268 - AluJb SINE Alu -2 310 1 1545 216 60 6 chr2 19746497 19746848 -233509735 + MLT1C LTR MaLR 95 464 -3 755 232 179 25 chr2 19746875 19747155 -233509428 + L2 LINE L2 2031 2353 -961 253 263 66 0 chr2 19747299 19747375 -233509208 - L2 LINE L2 -39 3233 3153 1305 263 24 29 chr2 19750140 19750419 -233506164 + L2 LINE L2 2164 2442 -872 1888 138 29 109 chr2 19750419 19750867 -233505716 + MLT2D LTR ERVL 1 412 -2 1305 263 24 29 chr2 19750867 19751006 -233505577 + L2 LINE L2 2442 2580 -734 1178 140 0 22 chr2 19751013 19751192 -233505391 + AluJb SINE Alu 136 310 -2 328 330 92 16 chr2 19751205 19751390 -233505193 + L2 LINE L2 3085 3283 -30 1624 219 23 6 chr2 19751392 19751744 -233504839 - MLT1A1 LTR MaLR -7 358 1 607 208 158 35 chr2 19752832 19753034 -233503549 - MIR SINE MIR -5 257 31 335 297 185 49 chr2 19753124 19753514 -233503069 + L2 LINE L2 2871 3313 0 346 280 8 8 chr2 19753726 19753844 -233502739 + Charlie5 DNA MER1_type 7 124 -2488 2077 113 25 6 chr2 19753855 19754217 -233502366 + Charlie5 DNA MER1_type 2245 2613 0 2383 131 44 109 chr2 19754659 19755162 -233501421 + MER101 LTR ERV1 4 473 -1 24 0 0 0 chr2 19755503 19755527 -233501056 + AT_rich Low_complexity Low_complexity 1 24 0 1980 192 21 45 chr2 19756135 19756604 -233499979 + MLT1D LTR MaLR 1 458 -47 444 232 92 14 chr2 19757002 19757144 -233499439 - MIR3 SINE MIR -31 177 25 275 235 0 15 chr2 19758545 19758613 -233497970 - MIR SINE MIR -16 246 180 718 214 15 82 chr2 19758633 19758829 -233497754 - MER5A DNA MER1_type -6 183 1 434 298 71 40 chr2 19758852 19759077 -233497506 - MIR SINE MIR -26 236 5 1031 235 70 9 chr2 19759701 19759931 -233496652 - MIR SINE MIR -17 245 2 246 200 29 0 chr2 19759995 19760065 -233496518 + (TAG)n Simple_repeat Simple_repeat 2 73 0 373 339 6 0 chr2 19760094 19760271 -233496312 + (TAG)n Simple_repeat Simple_repeat 2 179 0 222 225 0 0 chr2 19760305 19760385 -233496198 + (TAG)n Simple_repeat Simple_repeat 3 82 0 725 341 28 4 chr2 19760490 19760739 -233495844 + MIR SINE MIR 1 255 -7 538 290 56 28 chr2 19761717 19761931 -233494652 - MIR SINE MIR -6 256 37 288 346 74 52 chr2 19762217 19762448 -233494135 - L2 LINE L2 -470 2844 2609 741 117 0 0 chr2 19764297 19764434 -233492149 + (GGAA)n Simple_repeat Simple_repeat 3 139 0 1817 100 76 17 chr2 19766493 19766782 -233489801 - AluSx SINE Alu -6 306 1 180 345 0 17 chr2 19766900 19766958 -233489625 - MIR SINE MIR -6 256 200 459 326 22 11 chr2 19769128 19769306 -233487277 + MIR3 SINE MIR 22 201 -7 226 250 50 0 chr2 19769480 19769560 -233487023 + L1MC4 LINE L1 6617 6700 -1342 276 30 0 0 chr2 19769565 19769598 -233486985 + (TG)n Simple_repeat Simple_repeat 1 33 0 183 323 0 0 chr2 19769693 19769755 -233486828 + L2 LINE L2 2996 3057 -215 498 259 63 11 chr2 19770011 19770200 -233486383 + L1ME2 LINE L1 4943 5141 -1005 1097 142 18 60 chr2 19770201 19770419 -233486164 + AluJb SINE Alu 86 294 -18 3060 236 41 22 chr2 19770431 19771401 -233485182 + L1ME2 LINE L1 5162 6156 -8 240 329 25 0 chr2 19771431 19771510 -233485073 - L2 LINE L2 -4 3309 3229 378 0 0 0 chr2 19771588 19771630 -233484953 + (CA)n Simple_repeat Simple_repeat 1 42 0 541 303 91 0 chr2 19772506 19772704 -233483879 + MIR SINE MIR 46 261 -1 282 382 40 10 chr2 19772892 19773091 -233483492 - MIR SINE MIR -39 223 19 410 351 50 45 chr2 19773768 19774210 -233482373 - L2 LINE L2 0 3272 2829 1085 194 41 0 chr2 19774314 19774510 -233482073 - MER3 DNA MER1_type -5 204 1 315 0 0 0 chr2 19775790 19775825 -233480758 + (TG)n Simple_repeat Simple_repeat 2 36 0 207 0 0 0 chr2 19776705 19776728 -233479855 + (CAGAGA)n Simple_repeat Simple_repeat 2 24 0 249 325 26 0 chr2 19778283 19778360 -233478223 - MIR SINE MIR -16 246 168 627 194 58 52 chr2 19778474 19778665 -233477918 - MER112 DNA MER1_type -3 257 66 673 302 60 65 chr2 19780333 19780684 -233475899 - L2 LINE L2 -2 3270 2922 576 367 84 19 chr2 19783084 19783770 -233472813 - L2 LINE L2 -176 3096 2363 429 204 0 11 chr2 19785439 19785527 -233471056 + MLT1C LTR MaLR 381 467 0 396 298 35 0 chr2 19787556 19787670 -233468913 - MIR SINE MIR -35 227 110 399 314 15 31 chr2 19787741 19787872 -233468711 - MIR3 SINE MIR -6 202 73 2082 124 3 0 chr2 19788759 19789065 -233467518 + AluSc SINE Alu 1 307 -2 208 271 21 0 chr2 19789207 19789255 -233467328 + L2 LINE L2 3250 3298 -15 1286 243 93 33 chr2 19789272 19789671 -233466912 + MLT1J2 LTR MaLR 3 425 -25 1983 117 43 0 chr2 19790858 19791157 -233465426 + AluSx SINE Alu 1 312 0 184 206 29 200 chr2 19791208 19791378 -233465205 + MIR SINE MIR 56 196 -66 192 135 0 0 chr2 19791654 19791691 -233464892 + (TG)n Simple_repeat Simple_repeat 1 37 0 192 333 18 105 chr2 19791782 19791896 -233464687 - L2 LINE L2 -182 3090 2987 227 39 0 0 chr2 19794681 19794707 -233461876 + AluY SINE Alu 11 36 -264 633 141 0 0 chr2 19794707 19794799 -233461784 + AluSg/x SINE Alu 206 297 -13 308 272 154 6 chr2 19794800 19794962 -233461621 + L1M4 LINE L1 2435 2620 -3526 1018 169 4 37 chr2 19795158 19795401 -233461182 + L1M4 LINE L1 2645 2879 -3267 1510 204 64 52 chr2 19795410 19795850 -233460733 - L1MA9 LINE L1 -37 6275 5831 * 1676 232 99 3 chr2 19795846 19796420 -233460163 + L1M4 LINE L1 2840 3468 -2678 2389 202 32 4 chr2 19796432 19796893 -233459690 + L1MB5 LINE L1 3 476 -6373 426 103 0 0 chr2 19796954 19797012 -233459571 - Alu SINE Alu -259 59 2 7371 206 30 15 chr2 19797097 19799578 -233457005 + L1MB5 LINE L1 4177 6694 -182 465 19 0 0 chr2 19799613 19799667 -233456916 + (TG)n Simple_repeat Simple_repeat 2 55 0 201 121 0 0 chr2 19799681 19799714 -233456869 + (TA)n Simple_repeat Simple_repeat 1 33 0 1971 149 30 41 chr2 19799720 19799865 -233456718 - MLT2D LTR ERVL -50 364 219 1821 157 24 42 chr2 19799865 19800247 -233456336 - THE1C LTR MaLR 0 375 1 1971 149 30 41 chr2 19800247 19800469 -233456114 - MLT2D LTR ERVL -195 219 1 569 240 47 47 chr2 19800469 19800499 -233456084 + L1MB5 LINE L1 6698 6727 -149 2502 175 33 4 chr2 19800499 19800951 -233455632 - MLT1C LTR MaLR -2 465 1 569 240 47 47 chr2 19800951 19801091 -233455492 + L1MB5 LINE L1 6726 6868 -8 1770 154 14 0 chr2 19801644 19801937 -233454646 + AluSx SINE Alu 3 299 -13 190 397 0 0 chr2 19802173 19802251 -233454332 - MER5C DNA MER1_type -245 79 2 1239 238 134 2 chr2 19802417 19802820 -233453763 + L1ME3A LINE L1 5710 6165 -5 437 195 73 0 chr2 19803501 19803583 -233453000 + MER91C DNA MER1_type 1 88 -52 420 20 0 0 chr2 19803599 19803648 -233452935 + (TC)n Simple_repeat Simple_repeat 1 49 0 183 235 47 47 chr2 19805396 19805407 -233451176 + MER5A DNA MER1_type 6 16 -173 282 250 79 85 chr2 19805407 19805548 -233451035 - MER5B DNA MER1_type -2 187 16 202 243 100 43 chr2 19806313 19806383 -233450200 + L2 LINE L2 3168 3241 -31 1255 298 100 49 chr2 19808430 19809437 -233447146 - L2 LINE L2 0 3272 2213 293 297 123 14 chr2 19809567 19809828 -233446755 + L2 LINE L2 2720 3002 -270 337 299 41 14 chr2 19810605 19810752 -233445831 + L2 LINE L2 2825 2975 -338 2433 92 14 20 chr2 19811266 19811623 -233444960 + THE1A LTR MaLR 1 355 0 9271 96 34 1 chr2 19811623 19812868 -233443715 + THE1A-int LTR MaLR 1 1286 -294 354 81 46 23 chr2 19813224 19813311 -233443272 + (CA)n Simple_repeat Simple_repeat 2 90 0 827 62 9 26 chr2 19813337 19813450 -233443133 + THE1B LTR MaLR 1 111 -253 394 135 49 34 chr2 19813451 19813779 -233442804 + (CA)n Simple_repeat Simple_repeat 1 333 0 429 240 40 16 chr2 19814189 19814314 -233442269 + MIR SINE MIR 19 146 -62 333 0 0 0 chr2 19814667 19814704 -233441879 + (CA)n Simple_repeat Simple_repeat 2 38 0 390 337 57 73 chr2 19815608 19815908 -233440675 - L2 LINE L2 -20 3252 2958 2010 143 3 26 chr2 19817555 19817862 -233438721 + AluJo SINE Alu 2 301 -11 510 250 18 0 chr2 19819610 19819722 -233436861 - MER81 DNA DNA 0 114 1 2052 108 6 71 chr2 19820238 19820563 -233436020 - AluY SINE Alu -5 306 3 1979 210 40 62 chr2 19820762 19821342 -233435241 - L1MD3 LINE L1 -1 7994 7428 1356 195 4 12 chr2 19821625 19821866 -233434717 - MER8 DNA MER2_type 0 239 1 1924 116 58 69 chr2 19821901 19822280 -233434303 - THE1C LTR MaLR 0 375 1 489 333 18 12 chr2 19822794 19822965 -233433618 - MIR3 SINE MIR -21 187 16 2282 105 0 0 chr2 19824116 19824412 -233432171 + AluSg SINE Alu 1 296 -14 279 292 159 18 chr2 19826163 19826276 -233430307 + L2 LINE L2 3181 3309 -4 417 356 37 6 chr2 19826953 19827116 -233429467 + MIR SINE MIR 9 176 -86 193 336 18 45 chr2 19827287 19827397 -233429186 + L2 LINE L2 3008 3114 -158 495 286 148 5 chr2 19828978 19829188 -233427395 - MIR SINE MIR -14 248 9 264 239 109 11 chr2 19830000 19830092 -233426491 + MIR SINE MIR 35 135 -127 401 253 121 31 chr2 19830097 19830335 -233426248 - MIR SINE MIR 0 262 2 528 286 100 29 chr2 19831287 19831497 -233425086 - MIR SINE MIR -29 233 9 485 279 126 0 chr2 19831962 19832145 -233424438 + LTR33 LTR ERVL 3 208 -313 309 209 116 47 chr2 19832225 19832354 -233424229 + LTR33 LTR ERVL 384 521 0 241 264 11 58 chr2 19832918 19833005 -233423578 - MIR SINE MIR -94 114 32 1645 192 0 31 chr2 19833118 19833436 -233423147 + AluJo SINE Alu 1 308 -4 307 341 66 43 chr2 19834255 19834513 -233422070 - L3 LINE CR1 -9 1568 1305 716 263 158 15 chr2 19834584 19834926 -233421657 - L2 LINE L2 0 3313 2923 2297 122 0 3 chr2 19835069 19835373 -233421210 - AluSx SINE Alu -9 303 1 183 237 0 0 chr2 19835945 19835983 -233420600 + L3 LINE CR1 865 902 -675 468 310 141 17 chr2 19837073 19837363 -233419220 - L2 LINE L2 -77 3195 2870 226 228 18 0 chr2 19837758 19837815 -233418768 + (TGGA)n Simple_repeat Simple_repeat 1 58 0 203 136 45 0 chr2 19837819 19837863 -233418720 + GA-rich Low_complexity Low_complexity 3 48 0 286 366 21 21 chr2 19838836 19838978 -233417605 + MIR3 SINE MIR 2 143 -65 219 69 0 0 chr2 19839570 19839599 -233416984 + (A)n Simple_repeat Simple_repeat 1 29 0 288 333 33 17 chr2 19840595 19840715 -233415868 + L3 LINE CR1 1271 1392 -185 252 196 0 0 chr2 19841361 19841407 -233415176 - MIR SINE MIR -115 147 102 280 278 60 76 chr2 19842314 19842487 -233414096 - MIR SINE MIR -68 140 22 23 0 0 0 chr2 19842638 19842661 -233413922 + AT_rich Low_complexity Low_complexity 1 23 0 268 241 211 15 chr2 19843144 19843277 -233413306 + MIR SINE MIR 100 258 -4 187 330 134 0 chr2 19843859 19843956 -233412627 - L2 LINE L2 -18 3254 3145 315 347 97 19 chr2 19845337 19845553 -233411030 + L2 LINE L2 3000 3232 -40 435 38 0 0 chr2 19845570 19845623 -233410960 + (TGGA)n Simple_repeat Simple_repeat 2 54 0 372 22 0 0 chr2 19846411 19846456 -233410127 + (TC)n Simple_repeat Simple_repeat 1 45 0 413 302 11 2 chr2 19847031 19847142 -233409441 + MIR SINE MIR 5 116 -92 252 0 0 0 chr2 19847185 19847213 -233409370 + (TG)n Simple_repeat Simple_repeat 2 29 0 1172 297 53 10 chr2 19847215 19847801 -233408782 - L1MC4a LINE L1 -1899 5909 5299 946 306 40 55 chr2 19848185 19848790 -233407793 - ERVL LTR ERVL -4091 1673 1078 266 214 0 0 chr2 19849635 19849691 -233406892 - LTR33A LTR ERVL 0 523 468 1904 162 58 56 chr2 19850437 19850850 -233405733 - MLT2D LTR ERVL 0 414 1 203 281 101 76 chr2 19850852 19851090 -233405493 + L2 LINE L2 3029 3272 0 2577 60 0 13 chr2 19851208 19851522 -233405061 - AluY SINE Alu -1 310 1 189 234 0 78 chr2 19852417 19852481 -233404102 + MIR SINE MIR 66 124 -138 405 136 0 0 chr2 19853770 19853836 -233402747 + (TTTA)n Simple_repeat Simple_repeat 1 66 0 21 57 0 0 chr2 19854362 19854397 -233402186 + AT_rich Low_complexity Low_complexity 1 35 0 1504 169 43 66 chr2 19854406 19854707 -233401876 + AluSq SINE Alu 1 294 -19 728 260 80 72 chr2 19854730 19855107 -233401476 - MLT1I LTR MaLR -2 407 28 309 210 0 0 chr2 19855144 19855206 -233401377 + MER94 DNA DNA 8 69 -65 2398 92 0 3 chr2 19855318 19855624 -233400959 + AluSx SINE Alu 1 305 -7 1001 139 29 0 chr2 19855679 19855852 -233400731 + L1PA16 LINE L1 5958 6135 -31 318 353 8 8 chr2 19856147 19856266 -233400317 + MIR3 SINE MIR 13 131 -77 348 133 0 0 chr2 19857003 19857063 -233399520 + (CA)n Simple_repeat Simple_repeat 1 60 0 192 188 188 25 chr2 19857803 19857883 -233398700 - MIR SINE MIR -68 140 48 199 260 156 0 chr2 19857995 19858091 -233398492 + MIR SINE MIR 145 255 -7 3481 49 2 2 chr2 19858176 19858607 -233397976 + L1PA5 LINE L1 5724 6154 0 824 175 28 7 chr2 19859812 19859955 -233396628 + FRAM SINE Alu 1 146 -30 199 192 19 39 chr2 19859973 19860025 -233396558 - L3 LINE CR1 -15 1562 1512 188 181 111 83 chr2 19860103 19860175 -233396408 - L3 LINE CR1 -185 1392 1319 434 237 0 0 chr2 19862256 19862349 -233394234 - MER45A DNA AcHobo 0 178 86 263 329 102 29 chr2 19863013 19863150 -233393433 + MIR3 SINE MIR 55 201 -7 204 257 0 0 chr2 19866907 19866977 -233389606 + (CA)n Simple_repeat Simple_repeat 1 70 0 251 281 44 9 chr2 19868122 19868236 -233388347 + L2 LINE L2 2943 3060 -212 266 242 0 0 chr2 19869546 19869608 -233386975 - MLT1C LTR MaLR 0 390 329 701 172 5 115 chr2 19869631 19869823 -233386760 - MLT1C LTR MaLR -274 193 23 204 327 53 9 chr2 19869882 19869995 -233386588 + MIR3 SINE MIR 66 183 -25 1819 132 186 14 chr2 19870269 19870634 -233385949 - MSTA LTR MaLR 0 428 1 2156 103 0 4 chr2 19871368 19871699 -233384884 - AluSx SINE Alu 0 334 5 200 333 37 0 chr2 19871717 19871798 -233384785 + MIR SINE MIR 18 101 -161 249 224 0 30 chr2 19872692 19872759 -233383824 - MIR SINE MIR -73 135 71 1156 134 71 45 chr2 19872760 19873028 -233383555 - Charlie5 DNA MER1_type -68 2544 2270 1860 147 0 34 chr2 19873115 19873431 -233383152 - AluJb SINE Alu 0 306 1 401 220 30 0 chr2 19873439 19873539 -233383044 - Charlie5 DNA MER1_type -2503 109 7 2204 121 0 0 chr2 19873616 19873913 -233382670 + AluSx SINE Alu 1 297 -15 301 294 87 11 chr2 19874215 19874307 -233382276 - MIR SINE MIR -86 122 24 214 308 168 37 chr2 19874419 19874526 -233382057 + MIR SINE MIR 27 147 -61 1122 217 86 50 chr2 19874527 19874946 -233381637 - MLT1C LTR MaLR 0 467 34 354 278 102 29 chr2 19875378 19875583 -233381000 + L1ME LINE L1 5549 5768 -353 2931 112 90 56 chr2 19878023 19878158 -233378425 + L1MA6 LINE L1 5656 5785 -515 261 0 0 0 chr2 19878158 19878187 -233378396 + (CA)n Simple_repeat Simple_repeat 2 30 0 2931 112 90 56 chr2 19878187 19878675 -233377908 + L1MA6 LINE L1 5785 6300 0 2438 102 0 0 chr2 19880972 19881277 -233375306 + AluSx SINE Alu 1 305 -7 3567 91 91 0 chr2 19882513 19883086 -233373497 - LTR24C LTR ERV1 -1 634 10 200 241 37 19 chr2 19884173 19884227 -233372356 - MIR SINE MIR -119 89 35 750 107 10 0 chr2 19884403 19884506 -233372077 + AluSq/x SINE Alu 1 104 -209 865 191 42 0 chr2 19884661 19884829 -233371754 + AluSg/x SINE Alu 121 295 -17 2301 109 7 0 chr2 19884838 19885141 -233371442 + AluSq SINE Alu 1 305 -8 1744 168 7 0 chr2 19885160 19885440 -233371143 + AluJo SINE Alu 11 292 -20 2435 126 28 14 chr2 19887697 19888055 -233368528 - THE1B LTR MaLR -1 363 1 1973 113 69 36 chr2 19889426 19889789 -233366794 + THE1C LTR MaLR 1 375 0 205 347 27 53 chr2 19890354 19890504 -233366079 + MIR3 SINE MIR 1 146 -62 313 326 244 0 chr2 19894866 19895001 -233361582 + MIR3 SINE MIR 32 199 -9 778 230 63 0 chr2 19895766 19895940 -233360643 - MER5A DNA MER1_type -1 188 4 575 224 158 0 chr2 19895950 19896102 -233360481 - MER5A DNA MER1_type 0 189 14 458 297 61 40 chr2 19896446 19896691 -233359892 + L1ME LINE L1 5265 5509 -612 1647 254 79 10 chr2 19896847 19897453 -233359130 + MER114 LTR ERV 1 648 0 10512 112 25 3 chr2 19897970 19899408 -233357175 - Tigger1 DNA MER2_type 0 2418 941 2758 135 48 25 chr2 19899408 19899883 -233356700 + MER66B LTR ERV1 1 486 0 10512 112 25 3 chr2 19899883 19900032 -233356551 - Tigger1 DNA MER2_type -1477 941 797 784 286 36 18 chr2 19900118 19900506 -233356077 + L1MEc LINE L1 1987 2381 -4015 5737 249 72 15 chr2 19901224 19903285 -233353298 + L1MEc LINE L1 2322 4500 -1715 1117 281 130 52 chr2 19903415 19903653 -233352930 - L2 LINE L2 -4 3309 3091 1853 154 0 24 chr2 19903653 19903945 -233352638 - AluJo SINE Alu -27 285 1 1117 281 130 52 chr2 19903945 19904542 -233352041 - L2 LINE L2 -222 3091 2361 2405 89 0 3 chr2 19904542 19904844 -233351739 + AluY SINE Alu 1 301 -10 1117 281 130 52 chr2 19904844 19904998 -233351585 - L2 LINE L2 -952 2361 2220 276 206 0 16 chr2 19905002 19905065 -233351518 + MER94 DNA DNA 1 62 -72 532 280 148 22 chr2 19905119 19905390 -233351193 - L2 LINE L2 -1081 2233 1929 1825 161 3 7 chr2 19905581 19905873 -233350710 + AluSx SINE Alu 5 295 -17 8088 20 0 0 chr2 19905904 19906870 -233349713 - L1P LINE L1 -1177 4969 4004 7916 19 0 0 chr2 19906870 19907840 -233348743 + L1PA2 LINE L1 5186 6155 0 938 238 50 21 chr2 19907880 19908120 -233348463 - MIR SINE MIR 0 262 16 1993 128 180 11 chr2 19908310 19908676 -233347907 - MSTA LTR MaLR 0 428 1 544 284 103 46 chr2 19908978 19909503 -233347080 - L1ME LINE L1 -302 5819 5265 566 335 80 84 chr2 19910611 19912034 -233344549 + L2 LINE L2 360 1776 -1538 368 240 109 22 chr2 19912294 19912477 -233344106 - L1MC5 LINE L1 -418 7543 7345 1591 210 164 48 chr2 19912477 19913178 -233343405 - L1MC5 LINE L1 -520 7441 6660 1059 297 89 81 chr2 19913184 19914262 -233342321 + L2 LINE L2 1793 2879 -435 388 313 46 8 chr2 19914587 19914718 -233341865 - MIR3 SINE MIR -27 181 46 265 279 29 29 chr2 19915333 19915437 -233341146 - LTR16A1 LTR ERVL -2 455 352 226 214 0 0 chr2 19916183 19916225 -233340358 + L2 LINE L2 3272 3313 0 231 218 23 11 chr2 19916239 19916326 -233340257 + GA-rich Low_complexity Low_complexity 1 88 0 * 493 94 24 12 chr2 19916325 19916410 -233340173 + (GGGAA)n Simple_repeat Simple_repeat 2 87 0 1406 263 44 44 chr2 19916429 19916927 -233339656 - MLT1K LTR MaLR -81 507 10 439 296 74 72 chr2 19917554 19918038 -233338545 + MLT1K LTR MaLR 88 572 -16 256 339 77 23 chr2 19918518 19918648 -233337935 - MIR3 SINE MIR -71 137 1 1612 217 23 45 chr2 19919281 19919751 -233336832 - MLT1C LTR MaLR -7 460 1 580 226 274 5 chr2 19919998 19920210 -233336373 - L2 LINE L2 0 3313 3045 316 239 186 18 chr2 19920328 19920495 -233336088 - L2 LINE L2 -620 2694 2500 2285 101 0 19 chr2 19921317 19921633 -233334950 + AluSg SINE Alu 1 310 0 2119 109 41 22 chr2 19921713 19922081 -233334502 - THE1C LTR MaLR 0 375 1 1300 185 88 69 chr2 19922127 19922560 -233334023 - LTR37B LTR ERV1 -21 447 7 460 91 81 20 chr2 19923810 19923909 -233332674 + L1MB8 LINE L1 6074 6178 0 1512 138 0 5 chr2 19923932 19924149 -233332434 + AluJb SINE Alu 86 301 -11 193 171 98 0 chr2 19925801 19925842 -233330741 + MIR SINE MIR 211 255 -7 562 274 111 0 chr2 19926209 19926443 -233330140 + L1MC4 LINE L1 7783 8042 0 24 0 0 0 chr2 19926506 19926530 -233330053 + AT_rich Low_complexity Low_complexity 1 24 0 238 203 14 29 chr2 19929426 19929495 -233327088 + (TA)n Simple_repeat Simple_repeat 1 68 0 193 125 31 0 chr2 19929722 19929754 -233326829 - MIR SINE MIR -63 145 113 404 220 79 37 chr2 19930473 19930687 -233325896 + L1MC5 LINE L1 7246 7468 -493 365 314 96 29 chr2 19932569 19932849 -233323734 + L1 LINE L1 4721 5019 -1127 1522 110 18 9 chr2 19933140 19933368 -233323215 + AluSq SINE Alu 1 230 -83 869 148 7 0 chr2 19933368 19933503 -233323080 - AluJb SINE Alu -176 136 1 197 386 0 0 chr2 19933521 19933591 -233322992 - L2 LINE L2 -405 2908 2839 546 174 174 0 chr2 19933637 19933827 -233322756 - Charlie4a DNA MER1_type -4 504 282 1420 219 56 23 chr2 19933827 19934170 -233322413 + L1MB2 LINE L1 3100 3465 -2681 2158 108 35 57 chr2 19934170 19934542 -233322041 - THE1B LTR MaLR 0 364 1 1420 219 56 23 chr2 19934542 19934682 -233321901 + L1MB2 LINE L1 3465 3599 -2547 * 3994 186 48 30 chr2 19934670 19934810 -233321773 + L1MB2 LINE L1 4241 4377 -1794 2120 130 3 22 chr2 19934810 19935126 -233321457 + AluSx SINE Alu 1 310 -2 3994 186 48 30 chr2 19935126 19936633 -233319950 + L1MB2 LINE L1 4377 5856 -315 459 0 0 0 chr2 19936633 19936684 -233319899 + (TGG)n Simple_repeat Simple_repeat 1 51 0 3994 186 48 30 chr2 19936684 19936761 -233319822 + L1MB2 LINE L1 5856 5930 -241 846 195 6 18 chr2 19936761 19936925 -233319658 + FRAM SINE Alu 1 162 -4 3994 186 48 30 chr2 19936925 19936982 -233319601 + L1MB2 LINE L1 5930 6170 -1 574 248 141 30 chr2 19937228 19937527 -233319056 + L1M4 LINE L1 3854 4185 -1961 479 251 56 5 chr2 19937585 19937780 -233318803 + L1M4 LINE L1 4656 4860 -1286 486 202 84 0 chr2 19937849 19937968 -233318615 + HAL1b LINE L1 965 1093 -255 2811 206 67 0 chr2 19937987 19938648 -233317935 - L1ME1 LINE L1 -29 6137 5433 1908 125 0 0 chr2 19938716 19938980 -233317603 - AluSg SINE Alu -10 300 37 314 190 99 33 chr2 19938995 19939116 -233317467 + HAL1b LINE L1 965 1093 -255 2510 63 0 13 chr2 19939194 19939509 -233317074 - AluY SINE Alu 0 311 1 1341 36 12 0 chr2 19944673 19944838 -233311745 + L1PA7 LINE L1 5982 6148 -6 22 70 0 0 chr2 19944844 19944887 -233311696 + AT_rich Low_complexity Low_complexity 1 43 0 29 28 0 0 chr2 19945358 19945394 -233311189 + AT_rich Low_complexity Low_complexity 1 36 0 382 77 0 0 chr2 19945545 19945597 -233310986 + L1MA4A LINE L1 5899 5950 -353 593 125 0 0 chr2 19945597 19945685 -233310898 + AluY SINE Alu 212 299 -12 3032 133 30 0 chr2 19945693 19946195 -233310388 + L1PA7 LINE L1 3 519 -5942 19393 111 16 41 chr2 19946297 19947351 -233309232 - L1P3 LINE L1 -2275 4186 3108 2517 80 0 3 chr2 19947351 19947662 -233308921 - AluY SINE Alu -1 310 1 19393 111 16 41 chr2 19947662 19950598 -233305985 - L1P3 LINE L1 -3353 3108 217 26688 81 7 7 chr2 19950698 19952161 -233304422 + L1PA7 LINE L1 1693 3155 -3314 2496 84 0 3 chr2 19952161 19952472 -233304111 + AluY SINE Alu 1 310 -1 26688 81 7 7 chr2 19952472 19955788 -233300795 + L1PA7 LINE L1 3155 6467 -2 3823 96 0 4 chr2 19955809 19956322 -233300261 + MER9 LTR ERVK 1 511 0 20498 70 8 7 chr2 19956322 19957348 -233299235 + HERVK9 LTR ERVK 1 1024 -4892 2395 65 0 0 chr2 19957348 19957639 -233298944 + AluY SINE Alu 1 291 -20 20498 70 8 7 chr2 19957639 19959394 -233297189 + HERVK9 LTR ERVK 1024 2786 -3130 1810 43 0 0 chr2 19959394 19959625 -233296958 + HERVK9 LTR ERVK 3711 3941 -1975 * 7499 80 4 9 chr2 19959624 19960683 -233295900 + HERVK9 LTR ERVK 4582 5634 -282 2167 71 0 0 chr2 19960779 19961061 -233295522 + HERVK9 LTR ERVK 5635 5916 0 3867 76 2 8 chr2 19961061 19961575 -233295008 + MER9 LTR ERVK 1 511 0 459 227 34 102 chr2 19961764 19961873 -233294710 - MIR SINE MIR -1 261 167 2412 77 0 3 chr2 19961873 19962170 -233294413 - AluY SINE Alu -15 296 1 459 227 34 102 chr2 19962170 19962236 -233294347 - MIR SINE MIR -95 167 98 26 0 0 0 chr2 19962307 19962333 -233294250 + AT_rich Low_complexity Low_complexity 1 26 0 347 253 52 71 chr2 19962806 19962960 -233293623 + L1ME4a LINE L1 5959 6109 -12 271 162 54 0 chr2 19963087 19963161 -233293422 + (TA)n Simple_repeat Simple_repeat 2 79 0 828 201 7 13 chr2 19963744 19963898 -233292685 - FRAM SINE Alu -10 156 4 21 0 0 0 chr2 19963905 19963926 -233292657 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 19965883 19965905 -233290678 + AT_rich Low_complexity Low_complexity 1 22 0 450 0 0 0 chr2 19967087 19967137 -233289446 + (CCA)n Simple_repeat Simple_repeat 3 52 0 382 292 104 5 chr2 19967364 19967566 -233289017 - L1ME4a LINE L1 -83 6038 5817 28 79 0 0 chr2 19967566 19967629 -233288954 + AT_rich Low_complexity Low_complexity 1 63 0 328 178 33 33 chr2 19968193 19968283 -233288300 - L1MC5 LINE L1 -181 7780 7691 25 31 0 0 chr2 19968365 19968397 -233288186 + AT_rich Low_complexity Low_complexity 1 32 0 430 224 0 24 chr2 19969454 19969539 -233287044 - L2 LINE L2 0 3313 3231 1519 180 50 44 chr2 19969605 19969967 -233286616 + MLT1A1 LTR MaLR 2 365 0 1100 191 39 14 chr2 19972106 19972388 -233284195 + HAL1b LINE L1 527 815 -533 286 230 201 14 chr2 19972438 19972577 -233284006 + HAL1b LINE L1 895 1059 -289 422 213 91 70 chr2 19972587 19972817 -233283766 + HAL1b LINE L1 1091 1325 -23 210 333 16 0 chr2 19972863 19972926 -233283657 - L2 LINE L2 -8 3264 3201 24 32 0 0 chr2 19973049 19973080 -233283503 + AT_rich Low_complexity Low_complexity 1 31 0 1542 156 10 46 chr2 19973133 19973435 -233283148 + AluJb SINE Alu 1 291 -21 1654 177 54 49 chr2 19973624 19974030 -233282553 + LTR52 LTR ERVL 2 409 -12 342 251 59 148 chr2 19974487 19974758 -233281825 - MIR SINE MIR -14 248 2 516 238 118 48 chr2 19974953 19975268 -233281315 - L1MC5 LINE L1 -20 7941 7605 1885 194 40 40 chr2 19976065 19976534 -233280049 + Charlie7 DNA MER1_type 266 734 -1878 318 186 150 0 chr2 19976543 19976656 -233279927 + Charlie7 DNA MER1_type 2440 2569 -43 646 208 16 0 chr2 19981036 19981161 -233275422 - FLAM_A SINE Alu -6 127 1 25 51 0 0 chr2 19981168 19981207 -233275376 + AT_rich Low_complexity Low_complexity 1 39 0 364 231 105 91 chr2 19981371 19981514 -233275069 - L2 LINE L2 0 3313 3169 903 180 6 6 chr2 19981688 19981855 -233274728 + L1MD2 LINE L1 5834 6000 -359 1074 96 0 0 chr2 19981856 19982002 -233274581 + AluSg/x SINE Alu 165 310 -2 609 234 106 51 chr2 19982020 19982255 -233274328 + L1MD2 LINE L1 6112 6359 0 765 337 139 47 chr2 19982372 19982538 -233274045 - L2 LINE L2 -541 2773 2624 1051 205 0 28 chr2 19982538 19982753 -233273830 - MER3 DNA MER1_type 0 209 1 765 337 139 47 chr2 19982753 19983579 -233273004 - L2 LINE L2 -690 2624 1690 285 299 46 11 chr2 19983657 19983744 -233272839 + L2 LINE L2 3174 3263 -9 289 375 56 7 chr2 19983791 19983962 -233272621 + MIR SINE MIR 16 192 -58 1395 135 4 18 chr2 19985077 19985306 -233271277 - L1PB4 LINE L1 -5 6151 5926 300 227 383 0 chr2 19985307 19985435 -233271148 + MIR SINE MIR 85 261 -1 184 316 92 13 chr2 19985436 19985512 -233271071 - MIR SINE MIR -106 156 75 1195 0 0 0 chr2 19985842 19985975 -233270608 - AluYa5/8 SINE Alu -5 306 174 24 77 0 0 chr2 19986722 19986774 -233269809 + AT_rich Low_complexity Low_complexity 1 52 0 287 268 14 0 chr2 19987073 19987144 -233269439 - MIR3 SINE MIR -4 204 133 2706 152 41 10 chr2 19987221 19987992 -233268591 + L1M4 LINE L1 4976 5777 -407 2080 87 4 4 chr2 19988035 19988310 -233268273 - AluSc SINE Alu -34 275 1 340 303 0 0 chr2 19988502 19988591 -233267992 - MIR SINE MIR -94 168 80 573 258 94 82 chr2 19989443 19989676 -233266907 + MIR SINE MIR 12 247 -15 2493 30 10 0 chr2 19989679 19989977 -233266606 - AluY SINE Alu -10 301 1 825 223 135 9 chr2 19989995 19990210 -233266373 - MIR SINE MIR -9 253 12 2167 115 0 0 chr2 19990615 19990911 -233265672 - AluSx SINE Alu -16 296 1 229 328 148 39 chr2 19991301 19991429 -233265154 + L2 LINE L2 2917 3058 -214 253 292 0 0 chr2 19991450 19991515 -233265068 + L2 LINE L2 3248 3312 -1 269 294 29 0 chr2 19991573 19991641 -233264942 + L2 LINE L2 3203 3272 0 402 231 211 14 chr2 19991678 19991825 -233264758 - L2 LINE L2 -1 3271 3096 192 179 0 0 chr2 19992522 19992561 -233264022 + (TA)n Simple_repeat Simple_repeat 2 40 0 486 269 23 0 chr2 19993375 19993505 -233263078 + MER94 DNA DNA 1 133 -1 8922 105 8 7 chr2 19993966 19995266 -233261317 + HSMAR2 DNA Mariner 1 1301 -1 288 131 16 16 chr2 19995729 19995790 -233260793 + L1MA2 LINE L1 6244 6304 0 25 83 0 0 chr2 19995811 19995871 -233260712 + AT_rich Low_complexity Low_complexity 1 60 0 5144 227 120 74 chr2 19995939 19996780 -233259803 - HAL1 LINE L1 0 2507 1705 1949 95 4 0 chr2 19996780 19997073 -233259510 - AluSx SINE Alu 0 323 30 5144 227 120 74 chr2 19997073 19997430 -233259153 - HAL1 LINE L1 -802 1705 1366 1955 115 0 0 chr2 19997430 19997708 -233258875 - AluSx SINE Alu 0 312 35 5144 227 120 74 chr2 19997708 19997990 -233258593 - HAL1 LINE L1 -1141 1366 1098 2148 103 10 0 chr2 19997990 19998281 -233258302 - AluSx SINE Alu -18 294 1 5144 227 120 74 chr2 19998281 19999188 -233257395 - HAL1 LINE L1 -1409 1098 9 259 321 61 36 chr2 20000380 20000545 -233256038 - HAL1 LINE L1 -1 2506 2338 52 41 0 0 chr2 20000609 20000682 -233255901 + AT_rich Low_complexity Low_complexity 1 73 0 3158 162 131 111 chr2 20000762 20001357 -233255226 - L1MC3 LINE L1 -1 7784 7069 249 215 86 65 chr2 20001357 20001450 -233255133 - MLT1F1 LTR MaLR -442 125 31 3158 162 131 111 chr2 20001450 20001763 -233254820 - L1MC3 LINE L1 -716 7069 6764 1428 241 116 19 chr2 20001889 20002354 -233254229 + LTR33 LTR ERVL 1 510 -11 2441 67 0 0 chr2 20002806 20003104 -233253479 - AluY SINE Alu -13 298 1 525 194 91 24 chr2 20003179 20003344 -233253239 - MER104 DNA MER2_type -1 179 4 35 41 0 0 chr2 20004067 20004116 -233252467 + AT_rich Low_complexity Low_complexity 1 49 0 1205 224 142 17 chr2 20004307 20004659 -233251924 + MSTD LTR MaLR 1 396 0 418 298 92 9 chr2 20004882 20005100 -233251483 - MIR SINE MIR -6 256 21 26 30 0 0 chr2 20005764 20005797 -233250786 + AT_rich Low_complexity Low_complexity 1 33 0 26 0 0 0 chr2 20006033 20006059 -233250524 + AT_rich Low_complexity Low_complexity 1 26 0 32 57 0 0 chr2 20006411 20006464 -233250119 + AT_rich Low_complexity Low_complexity 1 53 0 1832 141 35 0 chr2 20006883 20007167 -233249416 + AluJb SINE Alu 1 294 -18 2233 98 3 0 chr2 20007186 20007491 -233249092 + AluY SINE Alu 1 306 -5 193 315 141 34 chr2 20007808 20007957 -233248626 + MIR SINE MIR 55 219 -43 22 35 0 0 chr2 20008411 20008440 -233248143 + AT_rich Low_complexity Low_complexity 1 29 0 232 186 23 0 chr2 20008838 20008881 -233247702 - L2 LINE L2 0 3313 3270 1039 320 107 85 chr2 20008904 20009478 -233247105 + L2 LINE L2 1314 1874 -1398 656 137 0 17 chr2 20009478 20009595 -233246988 + L1PB4 LINE L1 6041 6155 -1 565 123 0 0 chr2 20009602 20009683 -233246900 + MLT1B LTR MaLR 260 340 -50 1039 320 107 85 chr2 20009683 20009879 -233246704 + L2 LINE L2 1879 2069 -1203 1714 177 0 39 chr2 20009879 20010189 -233246394 - AluJo SINE Alu -14 298 1 1039 320 107 85 chr2 20010189 20011234 -233245349 + L2 LINE L2 2069 3271 -1 336 24 0 0 chr2 20011237 20011278 -233245305 + (CA)n Simple_repeat Simple_repeat 2 42 0 25 31 0 0 chr2 20011295 20011327 -233245256 + AT_rich Low_complexity Low_complexity 1 32 0 233 98 24 0 chr2 20012175 20012216 -233244367 + (TTTC)n Simple_repeat Simple_repeat 4 45 0 306 0 0 0 chr2 20012830 20012864 -233243719 + (CA)n Simple_repeat Simple_repeat 2 35 0 419 309 32 0 chr2 20013248 20013371 -233243212 - L2 LINE L2 0 3272 3146 1030 139 58 97 chr2 20014348 20014580 -233242003 - L1MC4 LINE L1 -190 7852 7629 1709 188 0 3 chr2 20014580 20014873 -233241710 - AluJo SINE Alu -18 294 3 1030 139 58 97 chr2 20014873 20014899 -233241684 - L1MC4 LINE L1 -413 7629 7604 2045 135 77 0 chr2 20015068 20015408 -233241175 + MER47A DNA MER2_type 1 366 0 810 343 34 66 chr2 20015986 20016528 -233240055 - L2 LINE L2 0 3272 2734 402 21 0 0 chr2 20017059 20017106 -233239477 + (TA)n Simple_repeat Simple_repeat 2 48 0 180 0 0 0 chr2 20018637 20018657 -233237926 + (A)n Simple_repeat Simple_repeat 1 20 0 2224 102 0 40 chr2 20018658 20018982 -233237601 + AluSx SINE Alu 1 311 -1 940 287 200 35 chr2 20018987 20019673 -233236910 - L2 LINE L2 -622 2692 1894 825 272 59 25 chr2 20019867 20020191 -233236392 + L1ME4a LINE L1 5539 5873 -248 197 300 38 38 chr2 20020219 20020299 -233236284 + L2 LINE L2 3234 3313 0 2480 75 0 3 chr2 20020598 20020903 -233235680 + AluY SINE Alu 1 304 -7 219 229 0 0 chr2 20020927 20020988 -233235595 + (TA)n Simple_repeat Simple_repeat 2 62 0 550 263 175 18 chr2 20021120 20021337 -233235246 + MIR SINE MIR 9 259 -3 529 256 167 0 chr2 20021362 20021518 -233235065 + MER5A DNA MER1_type 2 183 -6 239 310 21 84 chr2 20021523 20021665 -233234918 - MIR SINE MIR -26 182 49 404 64 0 0 chr2 20025317 20025364 -233231219 + Alu SINE Alu 17 63 -255 584 273 142 14 chr2 20026518 20026793 -233229790 - Charlie2 DNA MER1_type -2471 311 2 297 202 30 40 chr2 20027661 20027760 -233228823 + L1MC5 LINE L1 7832 7929 -32 1956 152 0 10 chr2 20027851 20028160 -233228423 + AluJo SINE Alu 1 306 -6 2233 125 0 0 chr2 20028215 20028527 -233228056 + AluSx SINE Alu 1 312 0 702 153 129 6 chr2 20029274 20029385 -233227198 + L1MB3 LINE L1 4385 4524 -1622 186 71 0 0 chr2 20029385 20029413 -233227170 + (TTAAA)n Simple_repeat Simple_repeat 3 30 0 702 153 129 6 chr2 20029413 20029464 -233227119 + L1MB3 LINE L1 4524 4567 -1579 250 196 289 0 chr2 20029462 20029559 -233227024 + L1MB3 LINE L1 5382 5506 -656 * 1294 142 33 0 chr2 20029721 20029932 -233226651 + L1MB3 LINE L1 5966 6183 0 186 200 133 76 chr2 20029978 20030083 -233226500 - L2 LINE L2 -479 2835 2725 219 69 0 0 chr2 20030808 20030837 -233225746 + (CA)n Simple_repeat Simple_repeat 2 30 0 22 0 0 30 chr2 20031501 20031518 -233225065 + AT_rich Low_complexity Low_complexity 1 18 -14 1987 155 3 3 chr2 20031518 20031821 -233224762 + AluJb SINE Alu 1 303 -9 22 0 0 30 chr2 20031821 20031836 -233224747 + AT_rich Low_complexity Low_complexity 18 32 0 481 175 117 33 chr2 20031902 20032022 -233224561 + MIR SINE MIR 1 130 -132 201 333 16 0 chr2 20032045 20032108 -233224475 + L2 LINE L2 3233 3296 -17 216 0 0 0 chr2 20032671 20032695 -233223888 + (A)n Simple_repeat Simple_repeat 1 24 0 201 261 148 23 chr2 20033953 20034041 -233222542 - MIR3 SINE MIR 0 208 110 2648 183 71 23 chr2 20034143 20034718 -233221865 - L1MC4a LINE L1 0 7808 7206 279 0 0 0 chr2 20035206 20035237 -233221346 + (CA)n Simple_repeat Simple_repeat 2 32 0 330 326 118 0 chr2 20035251 20035395 -233221188 + MIR3 SINE MIR 19 179 -29 1364 197 42 28 chr2 20035662 20035946 -233220637 - AluJo SINE Alu -24 288 1 223 244 0 0 chr2 20038620 20038661 -233217922 + (CACG)n Simple_repeat Simple_repeat 3 43 0 2368 71 31 0 chr2 20039973 20040267 -233216316 + AluY SINE Alu 1 303 -8 2294 82 0 3 chr2 20040285 20040576 -233216007 + AluSq SINE Alu 3 292 -21 239 296 93 28 chr2 20040716 20040824 -233215759 - L2 LINE L2 0 3313 3199 2229 120 0 0 chr2 20041001 20041300 -233215283 - AluSx SINE Alu -13 299 1 403 209 180 22 chr2 20041673 20041816 -233214767 - MIR SINE MIR -64 144 25 1856 156 3 13 chr2 20041982 20042284 -233214299 + AluJo SINE Alu 3 301 -11 2981 67 0 0 chr2 20042330 20042686 -233213897 + L1PA8 LINE L1 5806 6161 -11 2391 132 25 35 chr2 20042702 20043105 -233213478 + MER4E LTR ERV1 340 738 -28 2119 194 72 33 chr2 20043404 20043889 -233212694 + MLT1D LTR MaLR 1 504 -1 232 250 130 22 chr2 20045215 20045307 -233211276 + MIR SINE MIR 30 131 -77 25 0 0 0 chr2 20045637 20045662 -233210921 + GC_rich Low_complexity Low_complexity 1 25 0 24 32 0 0 chr2 20045732 20045763 -233210820 + GC_rich Low_complexity Low_complexity 1 31 0 244 353 108 24 chr2 20046440 20046607 -233209976 - L2 LINE L2 -100 3172 2992 2039 171 28 7 chr2 20046691 20047096 -233209487 + L1MB3 LINE L1 5681 6087 -64 471 246 11 94 chr2 20047217 20047272 -233209311 + LTR67 LTR ERVL 2 60 -497 3228 143 11 46 chr2 20047272 20047811 -233208772 - MLT2B1 LTR ERVL 0 520 1 471 246 11 94 chr2 20047811 20047946 -233208637 + LTR67 LTR ERVL 60 176 -381 445 285 28 28 chr2 20047942 20048086 -233208497 + LTR67 LTR ERVL 337 480 -77 * 414 218 135 53 chr2 20048086 20048256 -233208327 + MER91B DNA MER1_type 2 185 -5 1757 167 0 61 chr2 20048281 20048611 -233207972 - AluJo SINE Alu -2 310 1 21 0 0 0 chr2 20049230 20049251 -233207332 + AT_rich Low_complexity Low_complexity 1 21 0 285 257 316 27 chr2 20049440 20049627 -233206956 - MLT1J LTR MaLR -172 339 99 30 0 0 0 chr2 20050222 20050252 -233206331 + AT_rich Low_complexity Low_complexity 1 30 0 1790 157 21 11 chr2 20050255 20050536 -233206047 + AluJo SINE Alu 1 284 -28 337 241 25 135 chr2 20051042 20051142 -233205441 + MER112 DNA MER1_type 8 67 -193 2009 103 3 51 chr2 20051142 20051453 -233205130 - AluY SINE Alu -15 296 1 337 241 25 135 chr2 20051453 20051597 -233204986 + MER112 DNA MER1_type 67 225 -35 190 333 0 15 chr2 20051740 20051806 -233204777 + L2 LINE L2 3188 3252 -61 894 259 92 14 chr2 20052296 20052590 -233203993 - MLT1I LTR MaLR -2 407 91 311 246 48 24 chr2 20053238 20053364 -233203219 - MER5A DNA MER1_type 0 189 61 2582 124 22 0 chr2 20053369 20053725 -233202858 - THE1B LTR MaLR 0 364 1 11415 110 7 33 chr2 20053725 20055346 -233201237 - THE1B-int LTR MaLR 0 1580 2 2562 124 22 0 chr2 20055366 20055722 -233200861 - THE1B LTR MaLR 0 364 1 910 265 152 7 chr2 20056307 20056741 -233199842 - L1ME4a LINE L1 -1 6120 5624 211 368 60 40 chr2 20056778 20057080 -233199503 + L2 LINE L2 2179 2486 -828 1402 256 30 57 chr2 20057205 20057602 -233198981 + L1MEc LINE L1 1262 1641 -4755 2077 88 0 0 chr2 20057602 20057862 -233198721 - AluSg SINE Alu -16 294 35 1402 256 30 57 chr2 20057862 20058027 -233198556 + L1MEc LINE L1 1641 1809 -4587 855 243 28 0 chr2 20058056 20058237 -233198346 + AluJo SINE Alu 115 300 -12 2116 183 34 105 chr2 20058405 20058796 -233197787 + MER44D DNA MER2_type 4 396 -2091 8083 29 5 0 chr2 20058796 20060140 -233196443 + L1PA3 LINE L1 4808 6155 0 2116 183 34 105 chr2 20060140 20060337 -233196246 + MER44D DNA MER2_type 396 605 0 319 335 26 42 chr2 20060500 20060691 -233195892 - MIR SINE MIR -64 198 11 1228 135 96 0 chr2 20061324 20061532 -233195051 - L1PA15-16 LINE L1 -4222 2627 2400 940 138 0 0 chr2 20061532 20061662 -233194921 - AluSq/x SINE Alu -183 130 1 8531 160 45 33 chr2 20061665 20063223 -233193360 + L1PA15 LINE L1 3473 5011 -1154 2490 121 81 8 chr2 20063223 20063620 -233192963 - MSTA LTR MaLR -2 426 1 8531 160 45 33 chr2 20063620 20063920 -233192663 + L1PA15 LINE L1 5011 5306 -859 203 0 37 0 chr2 20063920 20063947 -233192636 + (CAA)n Simple_repeat Simple_repeat 2 29 0 8531 160 45 33 chr2 20063947 20063965 -233192618 + L1PA15 LINE L1 5306 5322 -843 2221 116 0 3 chr2 20063965 20064267 -233192316 + AluSx SINE Alu 1 301 -11 8531 160 45 33 chr2 20064267 20065067 -233191516 + L1PA15 LINE L1 5322 6165 0 1989 173 9 9 chr2 20065214 20065549 -233191034 + MER2 DNA MER2_type 1 335 -10 192 271 51 0 chr2 20068649 20068708 -233187875 - L2 LINE L2 -4 3309 3248 290 279 13 0 chr2 20069522 20069601 -233186982 + L2 LINE L2 3193 3272 0 26 0 0 0 chr2 20070723 20070749 -233185834 + AT_rich Low_complexity Low_complexity 1 26 0 1814 126 4 0 chr2 20071460 20071707 -233184876 - AluSx SINE Alu -12 300 53 682 229 0 0 chr2 20071734 20071856 -233184727 + FLAM_C SINE Alu 5 126 -17 2127 123 14 0 chr2 20071958 20072250 -233184333 - AluSx SINE Alu -15 297 2 1153 213 161 0 chr2 20072506 20072755 -233183828 + AluJo SINE Alu 1 289 -13 21 36 0 0 chr2 20072756 20072784 -233183799 + AT_rich Low_complexity Low_complexity 1 28 0 2177 84 38 3 chr2 20072808 20073095 -233183488 + AluSp SINE Alu 1 297 -16 788 203 0 0 chr2 20073095 20073233 -233183350 - MLT1A1 LTR MaLR -227 138 1 1636 190 64 0 chr2 20073548 20073875 -233182708 + MER7A DNA MER2_type 1 346 0 30 45 0 0 chr2 20074216 20074260 -233182323 + AT_rich Low_complexity Low_complexity 1 44 0 180 344 21 10 chr2 20074364 20074460 -233182123 - L3 LINE CR1 -5 1572 1476 279 79 0 0 chr2 20074552 20074590 -233181993 + (TG)n Simple_repeat Simple_repeat 1 38 0 1788 154 4 4 chr2 20074592 20074871 -233181712 - AluSx SINE Alu -33 279 1 453 320 190 23 chr2 20074898 20075168 -233181415 - L3 LINE CR1 -291 1286 1062 843 174 0 0 chr2 20075168 20075300 -233181283 - FLAM_C SINE Alu -1 132 1 453 320 190 23 chr2 20075300 20075604 -233180979 - L3 LINE CR1 -515 1062 616 187 352 71 36 chr2 20075674 20075927 -233180656 - L3 LINE CR1 -1131 446 185 1002 81 0 0 chr2 20075988 20076112 -233180471 - AluSg/x SINE Alu -25 287 164 960 136 0 0 chr2 20076113 20076245 -233180338 - AluSg/x SINE Alu -17 295 164 2205 116 3 3 chr2 20076247 20076549 -233180034 - AluSx SINE Alu -10 302 1 428 303 81 11 chr2 20076739 20076924 -233179659 - MIR SINE MIR -6 256 59 554 156 73 18 chr2 20077533 20077642 -233178941 + FLAM_A SINE Alu 17 131 -11 840 153 0 0 chr2 20077953 20078077 -233178506 - FLAM_C SINE Alu -18 125 2 898 161 87 0 chr2 20078354 20078515 -233178068 + FAM SINE Alu 1 175 0 2774 45 0 23 chr2 20079043 20079396 -233177187 + L1PA6 LINE L1 5808 6152 -2 904 152 0 36 chr2 20079530 20079695 -233176888 - AluJb SINE Alu -21 291 133 575 112 49 0 chr2 20079695 20079838 -233176745 + (TA)n Simple_repeat Simple_repeat 2 151 0 802 99 54 0 chr2 20079841 20079952 -233176631 - AluJb SINE Alu -187 125 9 2329 93 3 3 chr2 20080142 20080443 -233176140 + AluSc SINE Alu 1 301 -8 2825 19 0 0 chr2 20080443 20080751 -233175832 + AluYb8 SINE Alu 1 308 -10 334 225 19 2 chr2 20080797 20080897 -233175686 + L1MC5 LINE L1 7832 8041 -1 220 234 78 0 chr2 20080927 20080991 -233175592 - L2 LINE L2 -307 2965 2897 218 307 53 18 chr2 20082814 20082928 -233173655 - L2 LINE L2 -1903 1411 1294 707 196 68 41 chr2 20085551 20085770 -233170813 + LTR37A LTR ERV1 200 424 -2 227 279 16 0 chr2 20085907 20085968 -233170615 + L2 LINE L2 3160 3221 -92 294 268 198 6 chr2 20086144 20086301 -233170282 - MIR SINE MIR -25 237 51 612 216 12 54 chr2 20086309 20086476 -233170107 - MER5B DNA MER1_type 0 178 19 2571 68 0 3 chr2 20086560 20086867 -233169716 + AluSp SINE Alu 1 306 -7 1891 136 22 44 chr2 20087023 20087340 -233169243 + LTR32 LTR ERVL 22 331 -140 753 163 6 84 chr2 20087441 20087607 -233168976 + LTR32 LTR ERVL 319 471 0 251 281 98 34 chr2 20088057 20088292 -233168291 + L2 LINE L2 1917 2166 -1148 652 103 0 0 chr2 20088330 20088417 -233168166 - MSTA LTR MaLR 0 428 342 1752 169 23 7 chr2 20088444 20088745 -233167838 + AluSx SINE Alu 1 306 -6 2470 241 97 21 chr2 20088793 20089880 -233166703 + HAL1 LINE L1 673 1881 -626 1311 246 80 44 chr2 20089925 20090514 -233166069 + HAL1 LINE L1 1690 2299 -208 4139 135 19 56 chr2 20090516 20091287 -233165296 + L1MA5 LINE L1 5558 6300 0 352 196 21 0 chr2 20091307 20091381 -233165202 + AluJ/FLAM SINE Alu 2 63 -239 * 4306 163 30 57 chr2 20091375 20092409 -233164174 + Charlie1 DNA MER1_type 1755 2760 -1 846 136 0 0 chr2 20092568 20092686 -233163897 - FLAM_C SINE Alu -25 118 1 2148 156 40 3 chr2 20092713 20093059 -233163524 - MLT1A1 LTR MaLR -6 359 1 206 238 0 0 chr2 20093132 20093174 -233163409 + MIR SINE MIR 108 149 -113 705 239 48 0 chr2 20093922 20094089 -233162494 - MLT1C LTR MaLR 0 467 293 2479 90 8 8 chr2 20094106 20094460 -233162123 - L1PA11 LINE L1 0 6174 5821 361 228 51 0 chr2 20094738 20094817 -233161766 - MLT1A1 LTR MaLR 0 365 283 255 125 0 0 chr2 20096159 20096199 -233160384 + (A)n Simple_repeat Simple_repeat 1 40 0 2284 92 89 15 chr2 20096240 20096578 -233160005 + THE1B LTR MaLR 2 364 0 528 16 0 0 chr2 20097013 20097074 -233159509 + (TATG)n Simple_repeat Simple_repeat 2 62 0 836 72 0 0 chr2 20097074 20097171 -233159412 - AluSc SINE Alu -27 282 186 429 292 20 55 chr2 20097208 20097410 -233159173 + MIR3 SINE MIR 4 198 -10 958 236 71 63 chr2 20097835 20098229 -233158354 + MLT2C1 LTR ERVL 1 397 0 2875 220 70 16 chr2 20100009 20100683 -233155900 - L1ME1 LINE L1 -5 6161 5444 2610 91 89 5 chr2 20100683 20101078 -233155505 + MSTA LTR MaLR 1 428 0 2875 220 70 16 chr2 20101078 20101135 -233155448 - L1ME1 LINE L1 -722 5444 5391 407 172 141 10 chr2 20101244 20101343 -233155240 + L1MC4a LINE L1 5669 5780 -2028 1347 213 60 81 chr2 20101345 20101814 -233154769 - MLT2C2 LTR ERVL 0 464 6 2379 106 0 0 chr2 20101819 20102122 -233154461 + AluSc SINE Alu 1 303 -6 2030 128 0 3 chr2 20102129 20102453 -233154130 + AluSg SINE Alu 1 323 0 324 209 29 101 chr2 20102467 20102507 -233154076 + L1MC4a LINE L1 5791 5832 -1976 2288 102 3 0 chr2 20102507 20102801 -233153782 + AluSx SINE Alu 2 296 -16 324 209 29 101 chr2 20102801 20102899 -233153684 + L1MC4a LINE L1 5832 5919 -1889 22 0 0 0 chr2 20102899 20102921 -233153662 + AT_rich Low_complexity Low_complexity 1 22 0 2918 116 24 0 chr2 20102921 20103344 -233153239 - MER7C DNA MER2_type 0 602 170 985 72 14 29 chr2 20103344 20103483 -233153100 - MER1B DNA MER1_type 0 339 203 1528 143 0 0 chr2 20103516 20103732 -233152851 - MER1B DNA MER1_type -81 216 1 760 193 93 0 chr2 20103732 20103882 -233152701 - MER7C DNA MER2_type -425 177 14 2020 108 0 94 chr2 20103942 20104284 -233152299 + AluSg SINE Alu 1 310 0 1818 163 10 27 chr2 20105765 20106065 -233150518 + AluJo SINE Alu 1 295 -17 390 239 91 34 chr2 20106267 20106476 -233150107 + L2 LINE L2 2435 2655 -659 378 185 23 123 chr2 20106865 20106995 -233149588 + LTR4 LTR ERV1 1 117 -479 661 251 14 28 chr2 20107275 20107490 -233149093 + LTR4 LTR ERV1 385 596 0 588 263 0 0 chr2 20107765 20107879 -233148704 + MER81 DNA DNA 1 114 0 365 250 46 61 chr2 20108808 20108972 -233147611 + L1M4 LINE L1 2197 2350 -3796 1902 162 0 3 chr2 20108972 20109262 -233147321 - AluJo SINE Alu -23 289 1 365 250 46 61 chr2 20109262 20109391 -233147192 + L1M4 LINE L1 2350 2479 -3667 2291 225 50 16 chr2 20110485 20110987 -233145596 + LTR40a LTR ERVL 1 519 0 182 277 0 0 chr2 20111058 20111105 -233145478 + L2 LINE L2 3214 3260 -12 192 256 144 40 chr2 20113875 20114000 -233142583 - MIR SINE MIR -56 206 69 275 183 140 85 chr2 20114414 20114477 -233142106 - LTR33 LTR ERVL -53 468 410 665 137 9 142 chr2 20114477 20114625 -233141958 + MER53 DNA DNA 4 117 -72 2409 85 0 3 chr2 20114625 20114920 -233141663 + AluSp SINE Alu 1 294 -19 665 137 9 142 chr2 20114920 20114983 -233141600 + MER53 DNA DNA 117 187 -2 275 183 140 85 chr2 20114983 20115083 -233141500 - LTR33 LTR ERVL -111 410 296 776 215 112 18 chr2 20115227 20115484 -233141099 + MSTD LTR MaLR 1 339 -57 726 132 0 0 chr2 20115489 20115595 -233140988 - AluSg/x SINE Alu -1 311 206 2594 108 58 23 chr2 20115595 20116030 -233140553 + LTR7 LTR ERV1 1 450 0 11029 110 8 14 chr2 20116052 20119340 -233137243 + HERVH LTR ERV1 4 3736 -3977 6317 126 25 4 chr2 20119333 20120336 -233136247 + HERVH LTR ERV1 3962 4992 -2287 * 2617 90 34 15 chr2 20120315 20120725 -233135858 + HERVH LTR ERV1 7296 7713 0 * 2360 113 55 25 chr2 20120725 20121160 -233135423 + LTR7 LTR ERV1 1 448 -2 1492 130 5 0 chr2 20121162 20121370 -233135213 - AluSq SINE Alu -104 209 1 446 116 0 0 chr2 20121371 20121440 -233135143 + MSTD LTR MaLR 328 396 0 241 237 172 43 chr2 20121440 20121533 -233135050 - LTR33 LTR ERVL -416 105 1 263 386 18 0 chr2 20121803 20121917 -233134666 - MIR3 SINE MIR -9 199 84 2169 120 47 3 chr2 20122634 20122993 -233133590 + LTR8A LTR ERV1 1 375 -352 23 0 0 0 chr2 20123588 20123611 -233132972 + AT_rich Low_complexity Low_complexity 1 23 0 309 141 13 26 chr2 20124028 20124106 -233132477 + GA-rich Low_complexity Low_complexity 4 80 0 235 263 62 94 chr2 20125305 20125465 -233131118 + MER91A DNA MER1_type 40 194 -2 248 297 40 0 chr2 20126251 20126325 -233130258 + MLT1L LTR MaLR 114 190 -425 180 374 10 10 chr2 20127514 20127613 -233128970 - L2 LINE L2 -206 3066 2968 1075 271 61 44 chr2 20127836 20128312 -233128271 - HAL1 LINE L1 -135 2372 1889 1973 193 92 22 chr2 20128323 20128831 -233127752 - HAL1 LINE L1 -693 1814 1271 278 300 56 0 chr2 20129198 20129288 -233127295 + MIR3 SINE MIR 113 207 -1 1794 179 0 3 chr2 20129846 20130131 -233126452 + AluJo SINE Alu 1 284 -28 2666 51 0 3 chr2 20130230 20130542 -233126041 + AluY SINE Alu 1 311 0 1133 191 106 34 chr2 20131584 20131726 -233124857 - Charlie1b DNA MER1_type -2272 489 359 2201 103 12 38 chr2 20131726 20132045 -233124538 - AluSx SINE Alu -1 311 1 1133 191 106 34 chr2 20132045 20132280 -233124303 - Charlie1b DNA MER1_type -2402 359 85 296 272 33 33 chr2 20132320 20132412 -233124171 - Charlie1b DNA MER1_type -431 92 1 2457 79 0 31 chr2 20132437 20132755 -233123828 + AluSq SINE Alu 4 311 -2 270 0 0 0 chr2 20132845 20132875 -233123708 + (T)n Simple_repeat Simple_repeat 1 30 0 758 215 112 18 chr2 20133664 20133921 -233122662 + MSTD LTR MaLR 1 339 -57 1941 135 16 38 chr2 20133926 20134244 -233122339 - AluSx SINE Alu -1 311 1 903 185 86 22 chr2 20134247 20134479 -233122104 - Charlie1b DNA MER1_type -192 331 85 296 272 33 33 chr2 20134519 20134611 -233121972 - Charlie1b DNA MER1_type -431 92 1 2457 79 0 31 chr2 20134636 20134954 -233121629 + AluSq SINE Alu 4 311 -2 270 0 0 0 chr2 20135044 20135074 -233121509 + (T)n Simple_repeat Simple_repeat 1 30 0 388 259 118 18 chr2 20135777 20135947 -233120636 + MIR SINE MIR 28 214 -48 219 222 51 86 chr2 20135947 20136064 -233120519 + MIR SINE MIR 26 138 -70 * 1071 264 49 30 chr2 20136038 20136634 -233119949 + L2 LINE L2 2518 3124 -189 302 306 35 0 chr2 20136684 20136769 -233119814 + MIR3 SINE MIR 114 201 -7 269 264 56 0 chr2 20137052 20137124 -233119459 + Charlie1 DNA MER1_type 1 76 -2685 184 302 146 0 chr2 20137141 20137237 -233119346 + L2 LINE L2 2596 2705 -609 374 153 133 0 chr2 20137349 20137447 -233119136 - MER65A LTR ERV1 0 445 335 * 482 206 9 0 chr2 20137419 20137526 -233119057 + MER65A LTR ERV1 338 445 0 1486 127 6 106 chr2 20137543 20137605 -233118978 - MER65A LTR ERV1 -154 291 224 1790 155 49 11 chr2 20137605 20137889 -233118694 + AluJo SINE Alu 1 295 -17 818 54 18 0 chr2 20137889 20138000 -233118583 + (GGAGAA)n Simple_repeat Simple_repeat 3 115 0 1486 127 6 106 chr2 20138000 20138258 -233118325 - MER65A LTR ERV1 -219 226 2 4106 190 69 1 chr2 20138259 20139129 -233117454 - MER65A-int LTR ERV1 0 4871 3943 2249 113 7 0 chr2 20139324 20139624 -233116959 - AluSx SINE Alu -10 302 1 180 304 98 22 chr2 20139721 20139813 -233116770 + MIR SINE MIR 64 162 -100 2955 126 310 11 chr2 20141227 20141863 -233114720 - LTR12 LTR ERV1 0 826 1 702 173 48 129 chr2 20142045 20142316 -233114267 - pTR5 LTR ERV1 -1447 991 743 2219 114 0 3 chr2 20142408 20142714 -233113869 + AluY SINE Alu 1 305 -6 1849 150 40 7 chr2 20143282 20143582 -233113001 + AluJb SINE Alu 1 310 -2 2341 87 0 37 chr2 20143588 20143909 -233112674 + AluY SINE Alu 1 309 -2 1063 259 17 4 chr2 20144470 20144702 -233111881 + MIR SINE MIR 28 262 0 334 357 30 6 chr2 20144792 20144960 -233111623 - MIR SINE MIR -62 200 29 2274 82 3 54 chr2 20145084 20145401 -233111182 - AluSg SINE Alu -9 301 1 1509 233 159 30 chr2 20145561 20146088 -233110495 - MLT1G1 LTR MaLR 0 595 1 358 203 203 63 chr2 20147387 20147453 -233109130 - MIR SINE MIR 0 262 207 2202 110 0 0 chr2 20147453 20147761 -233108822 - AluSq SINE Alu 0 308 1 358 203 203 63 chr2 20147761 20147836 -233108747 - MIR SINE MIR -55 207 100 601 157 28 0 chr2 20148352 20148460 -233108123 + MIR SINE MIR 41 151 -111 213 241 69 17 chr2 20149129 20149187 -233107396 - MIR SINE MIR -70 192 132 215 191 24 0 chr2 20151737 20151779 -233104804 + (CATATA)n Simple_repeat Simple_repeat 4 46 0 707 225 16 0 chr2 20151781 20152035 -233104548 + (CATA)n Simple_repeat Simple_repeat 1 258 0 261 140 0 35 chr2 20152035 20152092 -233104491 - MER4-int LTR ERV1 -5433 1165 1111 267 244 0 0 chr2 20152092 20152170 -233104413 + (CA)n Simple_repeat Simple_repeat 2 79 0 1627 170 89 23 chr2 20152271 20152618 -233103965 + MLT1B LTR MaLR 1 370 -20 245 172 0 65 chr2 20153070 20153163 -233103420 + GA-rich Low_complexity Low_complexity 2 88 0 460 160 0 93 chr2 20153179 20153373 -233103210 + GA-rich Low_complexity Low_complexity 3 178 0 245 284 66 112 chr2 20154539 20154709 -233101874 + L2 LINE L2 1553 1729 -1585 2277 95 3 3 chr2 20154709 20154994 -233101589 + AluSx SINE Alu 1 285 -27 300 111 0 0 chr2 20154994 20155039 -233101544 + (CA)n Simple_repeat Simple_repeat 2 46 0 245 284 66 112 chr2 20155039 20155215 -233101368 + L2 LINE L2 1727 1884 -1430 1566 165 39 11 chr2 20155220 20155467 -233101116 + AluJo SINE Alu 30 286 -26 672 77 0 0 chr2 20155467 20155558 -233101025 + (GGAA)n Simple_repeat Simple_repeat 2 92 0 1566 165 39 11 chr2 20155558 20155570 -233101013 + AluJo SINE Alu 286 296 -16 356 95 16 16 chr2 20155574 20155617 -233100966 + AluS SINE Alu 2 44 -259 310 91 0 0 chr2 20155617 20155661 -233100922 + Alu SINE Alu 1 44 -256 2357 114 0 0 chr2 20155661 20155969 -233100614 + AluSg SINE Alu 1 308 -2 349 187 11 22 chr2 20155969 20156060 -233100523 + GA-rich Low_complexity Low_complexity 1 90 0 1348 322 122 12 chr2 20156062 20156814 -233099769 + L2 LINE L2 1878 2743 -571 2331 106 0 0 chr2 20156814 20157107 -233099476 - AluSx SINE Alu -19 293 1 1348 322 122 12 chr2 20157107 20157241 -233099342 + L2 LINE L2 2743 2861 -453 485 356 13 43 chr2 20157316 20157619 -233098964 + L2 LINE L2 2977 3270 -2 260 297 39 50 chr2 20157728 20157910 -233098673 - L2 LINE L2 -165 3107 2928 1326 173 107 15 chr2 20158638 20158909 -233097674 - AluJo SINE Alu -6 296 1 1871 162 29 19 chr2 20158963 20159272 -233097311 - AluJo SINE Alu 0 312 1 703 296 62 65 chr2 20159310 20159743 -233096840 - MLT1K LTR MaLR -60 528 97 638 270 86 95 chr2 20160509 20160682 -233095901 + MLT1H LTR MaLR 3 176 -370 1929 182 0 3 chr2 20160682 20160989 -233095594 + AluJo SINE Alu 1 306 -6 638 270 86 95 chr2 20160989 20161331 -233095252 + MLT1H LTR MaLR 176 542 -4 181 246 246 0 chr2 20162043 20162100 -233094483 - L2 LINE L2 -1 3271 3201 181 264 28 28 chr2 20162265 20162337 -233094246 - MIR SINE MIR -9 253 182 21 36 0 0 chr2 20162360 20162388 -233094195 + AT_rich Low_complexity Low_complexity 1 28 0 1847 158 3 54 chr2 20162693 20163009 -233093574 + AluSx SINE Alu 1 300 -12 555 272 17 56 chr2 20163047 20163279 -233093304 - L1MC/D LINE L1 -1994 5814 5592 736 152 15 8 chr2 20163303 20163435 -233093148 - AluJb SINE Alu -178 134 2 206 207 45 18 chr2 20163622 20163733 -233092850 + (TA)n Simple_repeat Simple_repeat 1 114 0 561 274 36 32 chr2 20163811 20164030 -233092553 + MLT1K LTR MaLR 363 582 -6 196 310 14 0 chr2 20164034 20164105 -233092478 - MIR SINE MIR -175 87 16 297 0 0 0 chr2 20164630 20164663 -233091920 + (TG)n Simple_repeat Simple_repeat 2 34 0 207 307 188 33 chr2 20164909 20165212 -233091371 + L2 LINE L2 2567 2916 -398 1898 199 68 33 chr2 20165218 20165705 -233090878 - MLT1D LTR MaLR -1 504 1 218 270 79 32 chr2 20165748 20165811 -233090772 + MER91A DNA MER1_type 123 188 -8 243 282 55 80 chr2 20165816 20165979 -233090604 + L2 LINE L2 2954 3112 -160 998 271 66 3 chr2 20166364 20166729 -233089854 + HAL1 LINE L1 4 391 -2116 405 295 78 6 chr2 20166843 20167009 -233089574 + HAL1 LINE L1 605 782 -1725 1361 219 205 36 chr2 20167020 20167091 -233089492 + HAL1 LINE L1 1033 1091 -1416 2850 105 19 0 chr2 20167091 20167511 -233089072 - MSTA LTR MaLR 0 428 1 1361 219 205 36 chr2 20167511 20168111 -233088472 + HAL1 LINE L1 1091 1818 -689 1141 146 8 0 chr2 20168554 20168731 -233087852 + AluSg/x SINE Alu 129 296 -16 476 293 25 6 chr2 20168864 20169021 -233087562 + L1ME3A LINE L1 6010 6169 -1 256 250 29 0 chr2 20169819 20169887 -233086696 - LTR67 LTR ERVL -431 126 57 1844 112 108 7 chr2 20170393 20170671 -233085912 - AluSx SINE Alu -6 306 1 371 266 65 53 chr2 20171792 20171961 -233084622 - MIR3 SINE MIR -21 187 17 261 307 11 11 chr2 20172455 20172543 -233084040 + MIR SINE MIR 28 115 -147 999 291 35 38 chr2 20172843 20173266 -233083317 + L1ME1 LINE L1 5740 6161 -5 378 234 9 37 chr2 20174025 20174132 -233082451 - MLT1K LTR MaLR -31 557 454 276 293 10 10 chr2 20174140 20174239 -233082344 + CT-rich Low_complexity Low_complexity 2 100 0 225 317 58 8 chr2 20175675 20175795 -233080788 - MIR SINE MIR -61 147 22 302 239 68 0 chr2 20176673 20176761 -233079822 - MIR3 SINE MIR -8 200 107 561 170 113 50 chr2 20177270 20177411 -233079172 + MER5A DNA MER1_type 40 189 0 398 298 33 8 chr2 20177888 20178009 -233078574 + MER91A DNA MER1_type 3 126 -70 268 299 43 8 chr2 20178844 20178961 -233077622 - L1ME4a LINE L1 -38 6083 5963 798 197 11 38 chr2 20181557 20181740 -233074843 + MER5B DNA MER1_type 1 178 0 225 364 63 38 chr2 20181869 20182108 -233074475 + L2 LINE L2 2974 3218 -54 201 74 0 0 chr2 20182251 20182278 -233074305 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 2099 157 12 30 chr2 20182422 20182686 -233073897 + L1MB7 LINE L1 5751 6005 -179 2242 101 0 36 chr2 20182686 20182993 -233073590 - AluSx SINE Alu -16 296 1 2099 157 12 30 chr2 20182993 20183154 -233073429 + L1MB7 LINE L1 6005 6168 -16 314 242 15 91 chr2 20183196 20183328 -233073255 - MER5A DNA MER1_type -5 184 63 519 275 22 55 chr2 20184254 20184472 -233072111 - MIR SINE MIR -6 256 42 254 329 71 0 chr2 20184747 20184902 -233071681 + L2 LINE L2 2797 2962 -352 411 237 132 0 chr2 20184940 20185054 -233071529 + L2 LINE L2 3185 3313 0 326 292 189 11 chr2 20185068 20185328 -233071255 + L2 LINE L2 3008 3313 0 21 0 0 0 chr2 20186482 20186503 -233070080 + AT_rich Low_complexity Low_complexity 1 21 0 4319 163 21 51 chr2 20186618 20187021 -233069562 - L1MB4 LINE L1 -11 6169 5755 234 0 0 0 chr2 20187021 20187047 -233069536 + (TA)n Simple_repeat Simple_repeat 1 26 0 4319 163 21 51 chr2 20187047 20187524 -233069059 - L1MB4 LINE L1 -425 5755 5318 2151 131 10 0 chr2 20187524 20187829 -233068754 - AluSx SINE Alu -3 309 2 4319 163 21 51 chr2 20187829 20187971 -233068612 - L1MB4 LINE L1 -862 5318 5173 937 274 151 9 chr2 20188224 20188662 -233067921 - L2 LINE L2 -1 3312 2813 2067 145 95 25 chr2 20188668 20189068 -233067515 + MSTA LTR MaLR 1 428 0 1659 183 4 25 chr2 20189112 20189391 -233067192 + AluJo SINE Alu 1 273 -39 616 138 0 0 chr2 20189391 20189485 -233067098 + AluJb SINE Alu 203 296 -16 825 298 147 25 chr2 20189557 20190128 -233066455 - L2 LINE L2 -675 2639 1999 251 54 27 0 chr2 20190222 20190259 -233066324 + (TC)n Simple_repeat Simple_repeat 1 38 0 2145 141 3 0 chr2 20190259 20190556 -233066027 - AluSx SINE Alu -14 298 1 471 231 75 12 chr2 20191109 20191269 -233065314 - L2 LINE L2 -1313 2001 1832 813 191 96 50 chr2 20191283 20191503 -233065080 - MIR SINE MIR 0 262 33 196 273 0 0 chr2 20191500 20191544 -233065039 - L2 LINE L2 -1510 1804 1761 * 1383 230 31 49 chr2 20191544 20191935 -233064648 - MLT1J1 LTR MaLR 0 446 63 834 309 90 17 chr2 20192022 20192556 -233064027 - L2 LINE L2 -1554 1760 1188 960 300 76 15 chr2 20192616 20193228 -233063355 - L1ME3 LINE L1 -336 5826 5152 1845 172 21 0 chr2 20193228 20193513 -233063070 - AluJo SINE Alu -15 297 7 960 300 76 15 chr2 20193513 20193694 -233062889 - L1ME3 LINE L1 -1010 5152 4983 * 4701 176 42 32 chr2 20193661 20195192 -233061391 - L1MD1 LINE L1 0 6242 4688 266 330 72 21 chr2 20195222 20195555 -233061028 - L1MB4 LINE L1 -1063 5083 4734 1038 171 0 0 chr2 20195688 20195846 -233060737 - AluJb SINE Alu -18 294 137 1027 242 45 14 chr2 20195849 20196138 -233060445 + MER93a LTR ERV1 101 398 -4 2015 134 10 3 chr2 20196144 20196434 -233060149 - AluSx SINE Alu -20 292 1 415 303 81 10 chr2 20196437 20196833 -233059750 - L1MB4 LINE L1 -1397 4749 4326 451 210 36 90 chr2 20197932 20198099 -233058484 - MER113 DNA MER1_type? -4 517 360 2232 108 3 0 chr2 20198230 20198517 -233058066 + AluSx SINE Alu 1 288 -24 323 211 39 29 chr2 20198554 20198658 -233057925 - MER113 DNA MER1_type? -408 113 9 237 264 11 11 chr2 20198666 20198753 -233057830 + MIR SINE MIR 167 253 -9 775 173 27 22 chr2 20198787 20198972 -233057611 + MER53 DNA DNA 4 189 0 344 107 77 18 chr2 20199601 20199770 -233056813 + (CA)n Simple_repeat Simple_repeat 1 179 0 * 469 67 62 56 chr2 20199729 20199908 -233056675 + (CACAC)n Simple_repeat Simple_repeat 1 180 0 204 109 65 0 chr2 20199911 20199957 -233056626 + (CA)n Simple_repeat Simple_repeat 2 50 0 407 226 46 111 chr2 20200104 20200321 -233056262 + L1MC5 LINE L1 7717 7919 -42 636 179 26 100 chr2 20200376 20200566 -233056017 + MER20 DNA MER1_type 1 176 -43 355 99 50 55 chr2 20200715 20200896 -233055687 + (CA)n Simple_repeat Simple_repeat 1 180 0 324 109 17 74 chr2 20200905 20201080 -233055503 + (CACAC)n Simple_repeat Simple_repeat 1 165 0 366 96 61 17 chr2 20201111 20201226 -233055357 + (CA)n Simple_repeat Simple_repeat 2 121 0 508 142 59 6 chr2 20201244 20201413 -233055170 + (CA)n Simple_repeat Simple_repeat 1 178 0 360 0 0 0 chr2 20202094 20202134 -233054449 + (TG)n Simple_repeat Simple_repeat 2 41 0 987 170 13 0 chr2 20202178 20202331 -233054252 - FRAM SINE Alu -21 155 1 227 318 83 38 chr2 20204352 20204484 -233052099 - L2 LINE L2 -9 3263 3126 1125 263 104 51 chr2 20204968 20205529 -233051054 - MLT1G LTR MaLR -8 582 2 393 248 23 31 chr2 20206392 20206521 -233050062 + MER63 DNA MER1_type 933 1060 0 208 290 101 14 chr2 20206588 20206657 -233049926 - MIR SINE MIR -177 85 11 188 310 56 0 chr2 20206835 20206906 -233049677 - MIR SINE MIR -92 116 42 1020 220 0 0 chr2 20207129 20207338 -233049245 - MER3 DNA MER1_type 0 209 1 285 233 129 43 chr2 20208558 20208674 -233047909 + L2 LINE L2 3187 3312 -1 315 184 92 11 chr2 20209971 20210058 -233046525 - MER94 DNA DNA -14 120 27 396 133 27 27 chr2 20210063 20210138 -233046445 + L1MC5 LINE L1 7625 7699 -262 2150 118 7 7 chr2 20210151 20210455 -233046128 + AluSx SINE Alu 1 304 -8 1666 165 4 0 chr2 20210462 20210710 -233045873 + 7SLRNA srpRNA srpRNA 1 249 -71 998 119 0 0 chr2 20260722 20260856 -232995727 - AluSq/x SINE Alu -178 134 1 1987 101 4 0 chr2 20260932 20261199 -232995384 + AluSx SINE Alu 31 298 -14 255 232 0 18 chr2 20261256 20261312 -232995271 - Charlie8 DNA MER1_type -2362 55 1 201 267 17 0 chr2 20261579 20261639 -232994944 - MIR SINE MIR -13 249 189 521 254 116 17 chr2 20261711 20261884 -232994699 - MIR SINE MIR -4 258 69 1018 164 72 34 chr2 20261908 20262116 -232994467 + AluJb SINE Alu 90 305 -7 1853 118 0 0 chr2 20262203 20262466 -232994117 + AluSx SINE Alu 40 302 -10 231 329 25 0 chr2 20263060 20263139 -232993444 + L2 LINE L2 2634 2714 -600 190 335 23 34 chr2 20263195 20263354 -232993229 + L2 LINE L2 2828 2986 -286 1842 214 18 88 chr2 20263354 20263826 -232992757 + MLT1D LTR MaLR 1 433 -72 1789 152 0 24 chr2 20263826 20264139 -232992444 - AluJb SINE Alu 0 306 1 1842 214 18 88 chr2 20264139 20264208 -232992375 + MLT1D LTR MaLR 433 505 0 190 335 23 34 chr2 20264208 20264224 -232992359 + L2 LINE L2 2986 3001 -271 653 188 26 13 chr2 20264594 20264946 -232991637 + CT-rich Low_complexity Low_complexity 1 356 0 1726 146 0 0 chr2 20264971 20265225 -232991358 - AluSx SINE Alu -58 254 1 2153 101 3 0 chr2 20265736 20266033 -232990550 + AluSx SINE Alu 1 298 -14 1488 285 62 23 chr2 20266521 20267002 -232989581 - MLT1J LTR MaLR -8 503 4 471 254 50 76 chr2 20267038 20267327 -232989256 + L1ME1 LINE L1 5402 5693 -477 1028 91 0 0 chr2 20267327 20267459 -232989124 + AluSp SINE Alu 1 132 -181 192 338 0 0 chr2 20267745 20267813 -232988770 + L2 LINE L2 2985 3052 -220 250 196 0 20 chr2 20269438 20269489 -232987094 + MIR SINE MIR 31 80 -182 201 338 52 52 chr2 20270194 20270348 -232986235 + MER91A DNA MER1_type 20 173 -23 249 108 0 0 chr2 20271033 20271070 -232985513 + (CA)n Simple_repeat Simple_repeat 1 37 0 551 184 132 0 chr2 20271771 20271907 -232984676 + MER63A DNA MER1_type 54 207 -3 583 328 131 12 chr2 20272032 20272352 -232984231 + L2 LINE L2 2913 3270 -2 249 309 136 42 chr2 20272819 20273028 -232983555 + MIR3 SINE MIR 3 223 -39 * 326 301 286 15 chr2 20272990 20273196 -232983387 - MIR SINE MIR 0 262 1 228 301 48 39 chr2 20273691 20273794 -232982789 + MIR SINE MIR 89 192 -70 325 238 25 12 chr2 20274724 20274804 -232981779 - MIR SINE MIR -173 89 9 610 166 29 86 chr2 20275003 20275142 -232981441 + FLAM_C SINE Alu 1 131 -2 1441 211 50 8 chr2 20275776 20276140 -232980443 + L1ME1 LINE L1 5780 6158 -8 2246 97 0 22 chr2 20276250 20276570 -232980013 + AluSq SINE Alu 1 313 0 269 338 155 0 chr2 20277072 20277285 -232979298 + L2 LINE L2 2496 2741 -573 470 257 8 128 chr2 20277288 20277418 -232979165 + L1MC/D LINE L1 5265 5354 -2454 1892 127 0 0 chr2 20277418 20277713 -232978870 + AluSx SINE Alu 14 308 0 470 257 8 128 chr2 20277713 20277830 -232978753 + L1MC/D LINE L1 5354 5483 -2325 290 345 43 0 chr2 20278005 20278144 -232978439 + L1MC/D LINE L1 5696 5840 -1968 309 259 57 114 chr2 20278246 20278404 -232978179 + HAL1b LINE L1 1195 1343 -5 469 324 111 37 chr2 20278592 20278999 -232977584 + L2 LINE L2 2831 3267 -5 1962 240 76 15 chr2 20279641 20280232 -232976351 - L1ME3 LINE L1 -1 6161 5535 193 184 20 20 chr2 20280861 20280910 -232975673 - L3 LINE CR1 -126 1451 1403 213 245 53 21 chr2 20287180 20287274 -232969309 + L2 LINE L2 2992 3088 -225 302 173 99 25 chr2 20287360 20287441 -232969142 - MIR SINE MIR -87 175 89 182 310 46 35 chr2 20288040 20288127 -232968456 - L2 LINE L2 -51 3221 3134 556 304 109 9 chr2 20289061 20289281 -232967302 + MIR SINE MIR 20 261 -1 1912 110 45 7 chr2 20289847 20290137 -232966446 + AluSx SINE Alu 6 306 -6 186 314 110 34 chr2 20290787 20290905 -232965678 + MIR3 SINE MIR 71 197 -11 262 248 68 75 chr2 20291609 20291742 -232964841 - MIR SINE MIR -50 212 81 1840 84 4 0 chr2 20292472 20292709 -232963874 + AluSx SINE Alu 6 243 -69 539 262 93 65 chr2 20297238 20297452 -232959131 - MIR SINE MIR -1 261 42 534 342 16 5 chr2 20298034 20298227 -232958356 - MIR SINE MIR -48 214 20 253 298 106 14 chr2 20299923 20300064 -232956519 - MIR3 SINE MIR -52 156 3 305 250 74 9 chr2 20300569 20300677 -232955906 - MIR SINE MIR -67 141 27 747 174 0 0 chr2 20300925 20301103 -232955480 + (CA)n Simple_repeat Simple_repeat 1 178 0 453 205 0 0 chr2 20301130 20301257 -232955326 + (CA)n Simple_repeat Simple_repeat 2 128 0 187 205 26 0 chr2 20301723 20301762 -232954821 + L2 LINE L2 3178 3217 -96 238 130 19 19 chr2 20302748 20302802 -232953781 + (CA)n Simple_repeat Simple_repeat 1 54 0 257 318 119 0 chr2 20302831 20302957 -232953626 + MIR SINE MIR 108 248 -14 361 328 44 7 chr2 20303075 20303217 -232953366 - MIR3 SINE MIR -68 140 9 197 340 38 0 chr2 20303590 20303696 -232952887 - L3b LINE CR1 -181 1402 1293 207 0 0 0 chr2 20304497 20304520 -232952063 + (CA)n Simple_repeat Simple_repeat 2 24 0 232 255 88 0 chr2 20304956 20305058 -232951525 + L2 LINE L2 3005 3115 -157 21 104 0 0 chr2 20306640 20306717 -232949866 + GC_rich Low_complexity Low_complexity 1 77 0 22 56 0 0 chr2 20306742 20306778 -232949805 + GC_rich Low_complexity Low_complexity 1 36 0 24 32 0 0 chr2 20306858 20306889 -232949694 + GC_rich Low_complexity Low_complexity 1 31 0 1302 100 0 0 chr2 20309134 20309304 -232947279 + AluSq SINE Alu 1 170 -143 1779 93 4 4 chr2 20309405 20309651 -232946932 - AluSx SINE Alu -66 246 1 1357 221 64 6 chr2 20309761 20310119 -232946464 - L1ME1 LINE L1 -8 6158 5780 197 254 0 0 chr2 20310126 20310181 -232946402 + L2 LINE L2 1656 1710 -1604 1240 139 0 10 chr2 20310187 20310201 -232946382 + AluSg/x SINE Alu 119 132 -178 2272 101 3 0 chr2 20310201 20310509 -232946074 + AluSx SINE Alu 1 309 -3 1240 139 0 10 chr2 20310509 20310688 -232945895 + AluSg/x SINE Alu 132 310 0 302 283 84 30 chr2 20310717 20310883 -232945700 - L1ME LINE L1 -302 5819 5645 317 297 0 27 chr2 20311117 20311228 -232945355 - L2 LINE L2 -214 3058 2951 879 132 6 12 chr2 20311557 20311724 -232944859 + (TTCC)n Simple_repeat Simple_repeat 4 169 0 3649 186 28 9 chr2 20311724 20312406 -232944177 - L1MC2 LINE L1 -8 6336 5642 542 183 67 0 chr2 20312406 20312526 -232944057 - L1MB2 LINE L1 -263 5908 5781 2378 199 97 6 chr2 20312555 20313449 -232943134 - L1MB2 LINE L1 -499 5672 4692 642 321 118 46 chr2 20313457 20313551 -232943032 - L1MB2 LINE L1 -2661 3485 3399 1767 167 0 29 chr2 20313551 20313862 -232942721 + AluJb SINE Alu 1 302 -10 642 321 118 46 chr2 20313862 20314308 -232942275 - L1MB2 LINE L1 -2747 3399 2846 735 171 8 0 chr2 20314310 20314427 -232942156 + FLAM_C SINE Alu 6 123 -20 403 301 39 19 chr2 20314466 20314622 -232941961 - L1MB2 LINE L1 -3262 2884 2726 2368 84 0 0 chr2 20316393 20316701 -232939882 + AluSg SINE Alu 1 308 -2 464 137 53 69 chr2 20316988 20317119 -232939464 + MER53 DNA DNA 1 129 -60 231 329 53 26 chr2 20317161 20317313 -232939270 - L2 LINE L2 -907 2407 2252 21 82 0 0 chr2 20317530 20317579 -232939004 + GC_rich Low_complexity Low_complexity 1 49 0 707 102 86 47 chr2 20317749 20317877 -232938706 - FLAM_C SINE Alu 0 133 1 207 206 0 111 chr2 20318601 20318634 -232937949 + L2 LINE L2 3240 3264 -49 2200 89 0 41 chr2 20318634 20318949 -232937634 + AluSx SINE Alu 1 302 -10 207 206 0 111 chr2 20318949 20318978 -232937605 + L2 LINE L2 3264 3295 -18 1807 189 0 6 chr2 20319194 20319506 -232937077 + AluJb SINE Alu 1 310 -2 2229 91 0 14 chr2 20320140 20320311 -232936272 - AluSx SINE Alu 0 304 137 2078 123 10 10 chr2 20320311 20320612 -232935971 - AluSp SINE Alu -12 301 1 2229 91 0 14 chr2 20320612 20320748 -232935835 - AluSx SINE Alu -167 137 1 348 296 171 22 chr2 20321229 20321432 -232935151 - MIR SINE MIR -32 230 12 360 150 17 0 chr2 20321473 20321533 -232935050 - U7 snRNA snRNA -2 61 1 481 211 49 28 chr2 20321806 20321948 -232934635 + L1ME3A LINE L1 5989 6133 -37 1745 164 27 0 chr2 20322046 20322345 -232934238 + AluJb SINE Alu 1 307 -5 2156 121 0 3 chr2 20323017 20323322 -232933261 + AluSg SINE Alu 1 304 -6 721 214 0 0 chr2 20323332 20323463 -232933120 + FLAM_C SINE Alu 1 131 -2 21 36 0 0 chr2 20325426 20325454 -232931129 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr2 20326209 20326234 -232930349 + AT_rich Low_complexity Low_complexity 1 25 0 343 256 173 15 chr2 20327126 20327259 -232929324 + L1ME LINE L1 5621 5774 -347 983 204 57 9 chr2 20327342 20327572 -232929011 + AluJb SINE Alu 62 302 -10 1219 135 163 28 chr2 20327979 20328261 -232928322 - MER2 DNA MER2_type -25 320 1 1571 184 15 0 chr2 20328359 20328626 -232927957 - AluJb SINE Alu -20 292 22 720 212 0 0 chr2 20328658 20328790 -232927793 - FLAM_C SINE Alu -1 132 1 1742 162 26 19 chr2 20329295 20329604 -232926979 - AluJb SINE Alu -1 311 1 26 0 0 0 chr2 20331384 20331410 -232925173 + AT_rich Low_complexity Low_complexity 1 26 0 2140 110 16 10 chr2 20331909 20332219 -232924364 + AluSx SINE Alu 1 312 0 21 0 0 0 chr2 20332921 20332942 -232923641 + AT_rich Low_complexity Low_complexity 1 21 0 25 51 0 0 chr2 20333331 20333370 -232923213 + AT_rich Low_complexity Low_complexity 1 39 0 2876 16 0 0 chr2 20333796 20334112 -232922471 - AluYb8 SINE Alu -2 316 1 3945 186 32 33 chr2 20334437 20335402 -232921181 - L1MB4 LINE L1 -36 6144 5176 5130 147 101 64 chr2 20336066 20336254 -232920329 + Tigger3b DNA MER2_type 1 181 -2847 2367 96 0 10 chr2 20336254 20336568 -232920015 + AluSx SINE Alu 1 311 -1 5130 147 101 64 chr2 20336568 20337094 -232919489 + Tigger3b DNA MER2_type 181 686 -2342 930 188 0 0 chr2 20337094 20337243 -232919340 + FRAM SINE Alu 1 149 -17 5130 147 101 64 chr2 20337243 20337714 -232918869 + Tigger3b DNA MER2_type 686 1231 0 29 28 0 0 chr2 20339159 20339195 -232917388 + AT_rich Low_complexity Low_complexity 1 36 0 2465 87 0 0 chr2 20339202 20339512 -232917071 + AluSg SINE Alu 1 310 0 270 0 0 0 chr2 20339513 20339543 -232917040 + (TA)n Simple_repeat Simple_repeat 2 31 0 1557 95 9 18 chr2 20340189 20340410 -232916173 + AluSg/x SINE Alu 77 295 -15 1800 147 0 46 chr2 20341305 20341591 -232914992 + AluJb SINE Alu 1 272 -40 182 36 0 36 chr2 20341591 20341619 -232914964 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1800 147 0 46 chr2 20341619 20341659 -232914924 + AluJb SINE Alu 272 312 0 954 244 102 83 chr2 20341838 20342172 -232914411 + L1MC4 LINE L1 7520 7869 -173 2192 96 7 14 chr2 20342172 20342465 -232914118 - AluSx SINE Alu -15 297 7 954 244 102 83 chr2 20342465 20342638 -232913945 + L1MC4 LINE L1 7869 8037 -5 324 310 0 26 chr2 20343000 20343116 -232913467 + MER8 DNA MER2_type 27 139 -100 22 35 0 0 chr2 20343390 20343419 -232913164 + AT_rich Low_complexity Low_complexity 1 29 0 2001 138 0 20 chr2 20343483 20343788 -232912795 + AluSx SINE Alu 9 307 -5 341 279 106 0 chr2 20344079 20344183 -232912400 - MIR SINE MIR -78 184 70 34 0 0 0 chr2 20344325 20344359 -232912224 + AT_rich Low_complexity Low_complexity 1 34 0 2208 73 0 4 chr2 20344359 20344631 -232911952 - AluY SINE Alu -25 286 16 1899 158 0 7 chr2 20346458 20346750 -232909833 - AluSx SINE Alu -13 299 10 2074 109 7 0 chr2 20347024 20347300 -232909283 + AluSx SINE Alu 3 280 -32 375 78 0 0 chr2 20347301 20347352 -232909231 + (TGAA)n Simple_repeat Simple_repeat 3 53 0 237 316 51 25 chr2 20347390 20347469 -232909114 + MIR SINE MIR 35 115 -147 1272 275 68 13 chr2 20347498 20348039 -232908544 - L1M4 LINE L1 -1166 4980 4410 232 271 132 23 chr2 20348335 20348464 -232908119 - MER20B DNA MER1_type -604 179 37 230 323 132 7 chr2 20349161 20349289 -232907294 + MIR SINE MIR 1 139 -69 1310 204 85 66 chr2 20350478 20351065 -232905518 + L1MC5 LINE L1 6975 7572 -389 23 0 0 0 chr2 20351110 20351133 -232905450 + AT_rich Low_complexity Low_complexity 1 23 0 26 50 0 0 chr2 20352946 20352986 -232903597 + AT_rich Low_complexity Low_complexity 1 40 0 241 184 0 20 chr2 20353650 20353699 -232902884 + (CATA)n Simple_repeat Simple_repeat 3 50 0 847 203 35 25 chr2 20359234 20359436 -232897147 - MER105 DNA DNA 0 204 1 1378 182 8 8 chr2 20359527 20359763 -232896820 - AluJo SINE Alu -38 274 39 202 284 245 49 chr2 20360317 20360623 -232895960 + L2 LINE L2 2484 2849 -465 817 312 108 29 chr2 20360778 20361565 -232895018 - L2 LINE L2 0 3313 2412 590 241 64 35 chr2 20361652 20362025 -232894558 - L1M4 LINE L1 -2853 3293 2910 286 143 0 0 chr2 20362031 20362073 -232894510 + 5S rRNA rRNA 1 42 -79 561 171 48 0 chr2 20362771 20362876 -232893707 + FLAM_C SINE Alu 21 130 -13 294 317 108 52 chr2 20362912 20363161 -232893422 - L2 LINE L2 -815 2499 2237 1080 110 6 43 chr2 20364156 20364319 -232892264 + AluSg SINE Alu 1 157 -153 25 0 0 0 chr2 20366216 20366241 -232890342 + AT_rich Low_complexity Low_complexity 1 25 0 221 176 0 20 chr2 20366724 20366775 -232889808 + CT-rich Low_complexity Low_complexity 2 51 0 1665 122 12 8 chr2 20367517 20367764 -232888819 - AluSx SINE Alu -21 291 44 2114 93 18 4 chr2 20367794 20368104 -232888479 + AluSp SINE Alu 1 314 0 1960 148 20 3 chr2 20368574 20368877 -232887706 + AluSx SINE Alu 3 310 -2 632 161 31 19 chr2 20370900 20371061 -232885522 + Charlie5 DNA MER1_type 2423 2585 -27 2599 37 0 0 chr2 20371359 20371655 -232884928 + AluY SINE Alu 1 296 -15 364 203 40 3 chr2 20372061 20372185 -232884398 - AluJ/monomer SINE Alu -246 54 1 191 245 306 20 chr2 20372957 20373055 -232883528 + MIR SINE MIR 74 199 -63 241 378 99 13 chr2 20373228 20373379 -232883204 - L2 LINE L2 -55 3217 3054 243 139 0 0 chr2 20373725 20373732 -232882851 + (TAA)n Simple_repeat Simple_repeat 2 8 -36 1636 102 125 16 chr2 20373732 20373988 -232882595 + AluSg SINE Alu 1 284 -26 243 139 0 0 chr2 20373988 20374023 -232882560 + (TAA)n Simple_repeat Simple_repeat 7 44 0 2470 143 57 30 chr2 20374085 20374526 -232882057 + MER21A LTR ERV1 459 911 -20 1969 144 0 11 chr2 20374528 20374813 -232881770 + AluSx SINE Alu 1 282 -30 433 104 15 0 chr2 20374960 20375027 -232881556 - MER4E LTR ERV1 -5 761 694 * 1597 136 95 74 chr2 20375019 20375298 -232881285 - MER4B LTR ERV1 -235 375 85 2426 68 3 0 chr2 20375298 20375594 -232880989 - AluSp SINE Alu -16 297 1 1597 136 95 74 chr2 20375594 20375681 -232880902 - MER4B LTR ERV1 -525 85 1 3136 135 40 54 chr2 20375808 20376416 -232880167 + MER4A LTR ERV1 2 600 0 1765 155 35 7 chr2 20376740 20377024 -232879559 - AluJb SINE Alu -20 292 1 304 279 136 75 chr2 20377025 20377225 -232879358 - L1MC/D LINE L1 -297 5824 5638 561 215 15 39 chr2 20377225 20377355 -232879228 - FLAM_A SINE Alu -6 127 1 304 279 136 75 chr2 20377355 20377513 -232879070 - L1MC/D LINE L1 -483 5638 5449 25 31 0 0 chr2 20377513 20377545 -232879038 + AT_rich Low_complexity Low_complexity 1 32 0 237 276 31 10 chr2 20378052 20378150 -232878433 + MER72 LTR ERV1 377 476 -246 633 193 49 50 chr2 20378158 20378390 -232878193 + LTR45B LTR ERV1 302 525 0 409 147 53 13 chr2 20378457 20378532 -232878051 + AluJb SINE Alu 190 267 -45 370 276 55 8 chr2 20378607 20378734 -232877849 - L1MC/D LINE L1 -1526 4620 4488 864 245 117 11 chr2 20379538 20379803 -232876780 + MER58B DNA MER1_type 46 338 -3 655 233 89 30 chr2 20379819 20380089 -232876494 + MER33 DNA MER1_type 29 314 -10 1699 147 84 7 chr2 20380348 20380634 -232875949 + AluJb SINE Alu 1 308 -4 299 276 32 8 chr2 20380726 20380849 -232875734 + L1M4 LINE L1 3719 3844 -2302 399 300 120 42 chr2 20380909 20381084 -232875499 + L1M4 LINE L1 4360 4520 -1626 1682 140 57 4 chr2 20381084 20381388 -232875195 + AluJb SINE Alu 1 312 0 399 300 120 42 chr2 20381388 20381619 -232874964 + L1M4 LINE L1 4520 4798 -1348 1956 128 10 0 chr2 20381750 20382046 -232874537 - AluSx SINE Alu -7 305 7 2059 116 7 7 chr2 20382077 20382380 -232874203 + AluSx SINE Alu 1 303 -9 381 222 19 28 chr2 20382573 20382681 -232873902 + L1MD1 LINE L1 6079 6185 -57 219 315 137 0 chr2 20384327 20384400 -232872183 + MIR3 SINE MIR 85 167 -41 5452 70 14 3 chr2 20387713 20388446 -232868137 + L1P LINE L1 4490 5230 -916 1667 184 13 23 chr2 20388696 20389006 -232867577 + AluJb SINE Alu 1 307 -5 1650 173 11 11 chr2 20389006 20389284 -232867299 + AluJb SINE Alu 1 278 -34 215 30 0 30 chr2 20389299 20389332 -232867251 + (TAAAA)n Simple_repeat Simple_repeat 3 34 0 25 75 0 0 chr2 20389495 20389548 -232867035 + AT_rich Low_complexity Low_complexity 1 53 0 590 177 16 32 chr2 20390203 20390327 -232866256 - FLAM_C SINE Alu -2 141 20 255 364 66 13 chr2 20390327 20390478 -232866105 - L2 LINE L2 -239 3033 2875 855 184 0 0 chr2 20390824 20390965 -232865618 + AluJb SINE Alu 1 141 -171 228 130 0 0 chr2 20390982 20391028 -232865555 + (A)n Simple_repeat Simple_repeat 1 46 0 22 56 0 0 chr2 20391642 20391678 -232864905 + AT_rich Low_complexity Low_complexity 1 36 0 1273 165 89 58 chr2 20391771 20391896 -232864687 + AluJo SINE Alu 1 121 -191 1980 138 7 0 chr2 20391896 20392193 -232864390 + AluSx SINE Alu 1 299 -13 1273 165 89 58 chr2 20392193 20392358 -232864225 + AluJo SINE Alu 121 300 -12 3980 122 51 7 chr2 20392690 20393362 -232863221 - L1PA15 LINE L1 0 6165 5465 727 171 47 0 chr2 20393465 20393594 -232862989 + AluJo SINE Alu 1 135 -177 2002 100 62 0 chr2 20395131 20395420 -232861163 + AluSg1 SINE Alu 1 307 -2 34 84 0 0 chr2 20395680 20395763 -232860820 + AT_rich Low_complexity Low_complexity 1 83 0 1195 95 6 0 chr2 20396300 20396458 -232860125 + AluSc SINE Alu 148 306 -3 498 254 51 0 chr2 20397282 20397400 -232859183 + MER94 DNA DNA 11 134 0 1068 154 24 107 chr2 20397456 20397709 -232858874 + AluJo SINE Alu 5 236 -76 1455 193 0 0 chr2 20397711 20397976 -232858607 + AluJo SINE Alu 46 310 -2 394 176 49 40 chr2 20398194 20398312 -232858271 + MIR SINE MIR 41 158 -50 2318 106 0 0 chr2 20398312 20398614 -232857969 + AluY SINE Alu 1 302 -9 193 372 0 43 chr2 20398877 20398971 -232857612 - MIR3 SINE MIR -110 98 9 270 0 0 0 chr2 20399054 20399084 -232857499 + (A)n Simple_repeat Simple_repeat 1 30 0 183 279 82 0 chr2 20399356 20399417 -232857166 - MIR SINE MIR -108 100 35 24 0 0 0 chr2 20400644 20400668 -232855915 + AT_rich Low_complexity Low_complexity 1 24 0 2441 70 0 0 chr2 20400767 20401066 -232855517 - AluY SINE Alu -12 299 1 1645 263 86 54 chr2 20402747 20403198 -232853385 + L1ME LINE L1 92 527 -5543 1918 148 24 7 chr2 20403198 20403496 -232853087 + AluSx SINE Alu 1 303 -9 1645 263 86 54 chr2 20403496 20403953 -232852630 + L1ME LINE L1 527 1029 -5041 236 215 0 46 chr2 20403967 20404032 -232852551 - MER65C LTR ERV1 -7 454 393 1934 154 3 10 chr2 20404039 20404338 -232852245 + AluJb SINE Alu 5 301 -11 1149 169 0 31 chr2 20404386 20404611 -232851972 + AluJb SINE Alu 95 312 0 1287 214 110 27 chr2 20404614 20404988 -232851595 - MER65C LTR ERV1 -56 405 1 670 275 74 30 chr2 20404988 20405395 -232851188 + L1ME LINE L1 1079 1503 -4758 2889 205 117 33 chr2 20405401 20406152 -232850431 + MER21B LTR ERV1 1 814 -49 332 123 70 0 chr2 20406199 20406256 -232850327 + MER21B-int LTR ERV1 2 62 -4129 1514 188 97 18 chr2 20406410 20406750 -232849833 + MER21B-int LTR ERV1 146 512 -3679 261 139 0 0 chr2 20406762 20406805 -232849778 + (A)n Simple_repeat Simple_repeat 1 43 0 1448 210 41 7 chr2 20407006 20407301 -232849282 - MER58B DNA MER1_type -36 305 1 360 0 0 0 chr2 20407428 20407468 -232849115 + (TG)n Simple_repeat Simple_repeat 2 41 0 1396 174 106 4 chr2 20408399 20408689 -232847894 + AluJo SINE Alu 3 319 0 720 179 0 0 chr2 20408776 20408888 -232847695 + AluJ SINE Alu 1 112 -200 2234 148 61 5 chr2 20408889 20409266 -232847317 + MSTA LTR MaLR 2 399 -29 1144 155 0 52 chr2 20409272 20409465 -232847118 + AluJ SINE Alu 107 289 -23 24 0 0 0 chr2 20409465 20409489 -232847094 + AT_rich Low_complexity Low_complexity 1 24 0 1608 150 92 7 chr2 20410097 20410370 -232846213 - AluJo SINE Alu -16 296 1 1773 171 16 13 chr2 20411323 20411633 -232844950 - AluJb SINE Alu -1 311 1 1534 149 12 90 chr2 20411663 20411827 -232844756 - AluJb SINE Alu -16 296 121 279 0 0 0 chr2 20411827 20411858 -232844725 + (TG)n Simple_repeat Simple_repeat 2 32 0 1534 149 12 90 chr2 20411858 20411894 -232844689 - AluJb SINE Alu -191 121 84 486 0 0 0 chr2 20411894 20411948 -232844635 + (TG)n Simple_repeat Simple_repeat 1 54 0 1534 149 12 90 chr2 20411948 20412067 -232844516 - AluJb SINE Alu -228 84 1 181 296 0 0 chr2 20412728 20412772 -232843811 - L2 LINE L2 -224 3048 3005 230 343 149 17 chr2 20412989 20413164 -232843419 - MIR SINE MIR 0 262 65 2295 97 0 3 chr2 20413265 20413563 -232843020 + AluSx SINE Alu 6 302 -10 21 36 0 0 chr2 20414199 20414227 -232842356 + AT_rich Low_complexity Low_complexity 1 28 0 424 269 84 8 chr2 20414385 20414504 -232842079 + FLAM_A SINE Alu 6 133 0 1991 128 3 47 chr2 20414743 20415063 -232841520 + AluSx SINE Alu 1 306 -6 370 259 45 53 chr2 20415261 20415663 -232840920 - Charlie2 DNA MER1_type -2215 567 2 314 227 49 119 chr2 20415664 20415849 -232840734 + MER5B DNA MER1_type 6 177 -1 324 271 36 2 chr2 20415951 20416093 -232840490 + MIR SINE MIR 37 205 -57 674 181 0 9 chr2 20416183 20416299 -232840284 + AluJ SINE Alu 3 117 -195 238 350 30 0 chr2 20416352 20416452 -232840131 + L1MC/D LINE L1 5614 5716 -2092 2159 122 3 0 chr2 20416993 20417304 -232839279 + AluSx SINE Alu 1 312 0 651 184 142 0 chr2 20418124 20418265 -232838318 - AluJo SINE Alu -31 281 121 819 203 0 0 chr2 20418379 20418522 -232838061 + AluJ SINE Alu 123 265 -47 306 98 78 0 chr2 20418522 20418573 -232838010 + AluJ SINE Alu 241 295 -7 23 54 0 0 chr2 20418578 20418615 -232837968 + AT_rich Low_complexity Low_complexity 1 37 0 1241 202 0 91 chr2 20418769 20419066 -232837517 + AluJb SINE Alu 5 274 -38 1601 165 0 0 chr2 20419194 20419484 -232837099 - AluJb SINE Alu 0 319 30 2334 87 0 3 chr2 20419846 20420158 -232836425 + AluY SINE Alu 1 311 0 1671 143 6 78 chr2 20420228 20420550 -232836033 - AluJo SINE Alu -9 303 5 2243 90 7 0 chr2 20420737 20421025 -232835558 + AluSq SINE Alu 1 290 -23 748 178 0 8 chr2 20423191 20423312 -232833271 + FLAM_C SINE Alu 6 127 -185 216 0 0 0 chr2 20423312 20423336 -232833247 + (TAA)n Simple_repeat Simple_repeat 1 24 0 1535 132 27 27 chr2 20423793 20424089 -232832494 + AluJb SINE Alu 1 296 -16 21 36 0 0 chr2 20425516 20425544 -232831039 + GC_rich Low_complexity Low_complexity 1 28 0 224 130 22 0 chr2 20425870 20425916 -232830667 + CT-rich Low_complexity Low_complexity 1 47 0 26 30 0 0 chr2 20426088 20426121 -232830462 + GC_rich Low_complexity Low_complexity 1 33 0 333 244 24 12 chr2 20426938 20427020 -232829563 + L2 LINE L2 3134 3216 -56 268 326 152 37 chr2 20427080 20427540 -232829043 + L2 LINE L2 2247 2759 -555 254 138 123 15 chr2 20427980 20428045 -232828538 + MLT1K LTR MaLR 513 584 -4 216 309 62 0 chr2 20428067 20428148 -232828435 - MIR SINE MIR -13 249 164 808 228 0 41 chr2 20428149 20428320 -232828263 + MER45A DNA AcHobo 1 164 -14 423 244 9 0 chr2 20428346 20428461 -232828122 + MER103 DNA DNA 49 164 -2 552 219 175 7 chr2 20428763 20428900 -232827683 + MER5A DNA MER1_type 29 188 -1 363 274 35 35 chr2 20428902 20429015 -232827568 + MLT1L LTR MaLR 151 263 -352 759 209 0 78 chr2 20429277 20429421 -232827162 - MER5B DNA MER1_type 0 178 51 2349 80 0 0 chr2 20429421 20429748 -232826835 + AluSq SINE Alu 1 313 0 759 209 0 78 chr2 20429748 20429794 -232826789 - MER5B DNA MER1_type -127 51 3 799 153 0 8 chr2 20429946 20430077 -232826506 + AluJo SINE Alu 5 134 -178 396 236 130 75 chr2 20430118 20430411 -232826172 - HAL1b LINE L1 -71 1277 969 405 0 0 0 chr2 20430411 20430456 -232826127 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 454 228 57 49 chr2 20430468 20430591 -232825992 - FRAM SINE Alu -49 127 4 396 213 132 114 chr2 20430593 20430714 -232825869 - HAL1b LINE L1 -365 983 866 2240 92 0 0 chr2 20430714 20431006 -232825577 + AluSg SINE Alu 2 293 -17 396 213 132 114 chr2 20431006 20431217 -232825366 - HAL1b LINE L1 -482 866 645 417 263 135 19 chr2 20431237 20431393 -232825190 - MLT1H LTR MaLR 0 549 376 790 215 134 11 chr2 20431441 20431627 -232824956 - MLT1H LTR MaLR -268 281 73 1642 173 10 13 chr2 20431693 20432006 -232824577 + AluJb SINE Alu 1 312 0 1368 150 120 15 chr2 20432097 20432363 -232824220 + AluJo SINE Alu 1 294 -18 362 192 77 13 chr2 20432375 20432453 -232824130 + LTR50 LTR ERVL 85 167 -628 962 90 0 0 chr2 20432499 20432632 -232823951 + AluSp SINE Alu 1 133 -180 315 111 25 12 chr2 20432637 20432718 -232823865 + (TA)n Simple_repeat Simple_repeat 2 83 0 1212 109 29 0 chr2 20432718 20432892 -232823691 + AluSp SINE Alu 123 301 -12 1256 237 139 31 chr2 20432973 20433425 -232823158 + LTR50 LTR ERVL 295 795 0 578 150 63 8 chr2 20433610 20433737 -232822846 - L1MB8 LINE L1 -1 6177 6044 265 235 0 0 chr2 20433765 20433816 -232822767 - MER66A LTR ERV1 -138 340 290 2249 75 3 38 chr2 20433841 20434160 -232822423 - AluY SINE Alu -3 308 1 1409 197 68 4 chr2 20434161 20434440 -232822143 - AluJb SINE Alu -5 297 1 923 204 5 16 chr2 20434442 20434633 -232821950 - L1MB8 LINE L1 -126 6052 5864 834 144 0 27 chr2 20434633 20434779 -232821804 - FLAM_C SINE Alu 0 143 2 1190 154 18 14 chr2 20434782 20435003 -232821580 - L1MB8 LINE L1 -306 5878 5657 1883 127 0 7 chr2 20435376 20435659 -232820924 + AluJb SINE Alu 1 281 -31 2031 136 10 0 chr2 20436046 20436348 -232820235 + AluSq SINE Alu 1 305 -8 1836 136 121 82 chr2 20436677 20436710 -232819873 - MSTA LTR MaLR -8 420 390 2037 128 3 6 chr2 20436710 20437022 -232819561 + AluSx SINE Alu 1 311 -1 1836 136 121 82 chr2 20437022 20437392 -232819191 - MSTA LTR MaLR -38 390 1 2264 112 0 0 chr2 20437576 20437888 -232818695 + AluSx SINE Alu 1 312 0 813 157 0 22 chr2 20438096 20438230 -232818353 + FLAM_A SINE Alu 1 131 -2 720 133 92 0 chr2 20438389 20438509 -232818074 + FLAM_C SINE Alu 3 133 0 2138 99 14 0 chr2 20439067 20439359 -232817224 + AluSx SINE Alu 1 296 -16 2022 135 0 7 chr2 20439380 20439683 -232816900 + AluJb SINE Alu 1 301 -11 1515 217 0 0 chr2 20440063 20440344 -232816239 + AluJb SINE Alu 1 281 -31 273 29 0 0 chr2 20440349 20440383 -232816200 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1642 262 91 16 chr2 20440686 20441516 -232815067 + L2 LINE L2 2413 3300 -13 754 146 7 44 chr2 20441518 20441655 -232814928 + FLAM_C SINE Alu 1 132 -1 228 384 0 0 chr2 20442147 20442220 -232814363 - L2 LINE L2 -1 3271 3199 2256 143 14 8 chr2 20442262 20442633 -232813950 - THE1C LTR MaLR 0 375 3 5717 118 1 5 chr2 20442635 20443420 -232813163 - THE1C-int LTR MaLR 0 1580 799 23 68 0 0 chr2 20443445 20443489 -232813094 + AT_rich Low_complexity Low_complexity 1 44 0 1320 229 93 45 chr2 20443496 20443777 -232812806 + LTR29 LTR ERV1 162 473 -149 1561 169 7 49 chr2 20443777 20444085 -232812498 + AluJb SINE Alu 1 295 -17 1320 229 93 45 chr2 20444085 20444243 -232812340 + LTR29 LTR ERV1 473 622 0 1860 150 54 10 chr2 20444245 20444558 -232812025 + LTR29-int LTR ERV1 1 327 -6004 611 235 26 20 chr2 20444591 20444744 -232811839 - MER74A LTR ERVL -404 154 1 232 143 125 71 chr2 20444820 20444876 -232811707 + MLT1H LTR MaLR 265 323 -226 229 173 13 147 chr2 20444952 20445027 -232811556 + MLT1H LTR MaLR 485 549 0 2280 134 41 6 chr2 20445089 20445454 -232811129 - MER41D LTR ERV1 -179 378 1 354 122 0 0 chr2 20445661 20445710 -232810873 - MER63 DNA MER1_type -35 1025 977 522 161 0 0 chr2 20445711 20445792 -232810791 - MER63 DNA MER1_type -311 751 671 192 77 0 0 chr2 20445793 20445819 -232810764 + (T)n Simple_repeat Simple_repeat 1 26 0 2067 96 11 0 chr2 20445840 20446121 -232810462 + AluSx SINE Alu 16 299 -13 730 215 0 13 chr2 20446124 20446273 -232810310 + MER6B DNA MER2_type 1 147 -63 418 133 13 53 chr2 20446301 20446376 -232810207 + MER6 DNA MER2_type 794 865 0 248 341 32 51 chr2 20446496 20446713 -232809870 + MLT1K LTR MaLR 183 395 -193 206 324 0 0 chr2 20446727 20446798 -232809785 + GA-rich Low_complexity Low_complexity 2 72 0 * 211 256 0 0 chr2 20446762 20446801 -232809782 + polypurine Low_complexity Low_complexity 1 39 0 2380 162 19 32 chr2 20446860 20447292 -232809291 - MSTB LTR MaLR 0 426 1 312 148 16 33 chr2 20447312 20447373 -232809210 + MLT1K LTR MaLR 529 588 0 2195 105 0 0 chr2 20447636 20447930 -232808653 + AluSx SINE Alu 6 299 -13 1080 204 180 0 chr2 20448372 20448490 -232808093 + AluJb SINE Alu 1 96 -206 306 0 0 0 chr2 20448490 20448524 -232808059 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1080 204 180 0 chr2 20448524 20448655 -232807928 + AluJb SINE Alu 96 295 -7 1692 107 0 0 chr2 20448774 20449062 -232807521 - AluSg SINE Alu 0 336 49 786 168 0 15 chr2 20449147 20449284 -232807299 + AluJo SINE Alu 2 136 -176 23 0 0 0 chr2 20449430 20449453 -232807130 + AT_rich Low_complexity Low_complexity 1 23 0 1745 144 0 54 chr2 20449509 20449822 -232806761 + AluSx SINE Alu 9 304 -8 220 205 36 36 chr2 20449866 20449949 -232806634 + A-rich Low_complexity Low_complexity 2 84 0 3420 132 71 91 chr2 20450861 20451620 -232804963 - Ricksha DNA DNA 0 3246 2503 955 176 24 0 chr2 20451620 20451790 -232804793 + FAM SINE Alu 1 174 -11 3957 134 41 24 chr2 20451792 20452080 -232804503 - Ricksha DNA DNA -735 2511 2230 1209 172 119 32 chr2 20452080 20452365 -232804218 + AluYa5 SINE Alu 1 310 -1 3957 134 41 24 chr2 20452365 20452405 -232804178 - Ricksha DNA DNA -1016 2230 2192 2013 121 20 0 chr2 20452405 20452703 -232803880 - AluSx SINE Alu -8 304 1 3957 134 41 24 chr2 20452703 20453052 -232803531 - Ricksha DNA DNA -1054 2192 1821 1046 210 73 4 chr2 20453050 20453283 -232803300 - Ricksha DNA DNA -2957 289 41 * 1065 277 45 3 chr2 20453306 20453616 -232802967 - LTR16A LTR ERVL -17 433 111 307 361 57 10 chr2 20453751 20453945 -232802638 - L2 LINE L2 -926 2388 2186 297 148 37 0 chr2 20454258 20454339 -232802244 + CT-rich Low_complexity Low_complexity 2 85 0 6218 73 8 16 chr2 20454757 20455442 -232801141 - L1PA10 LINE L1 0 6168 5489 2049 116 3 3 chr2 20455442 20455743 -232800840 - AluSx SINE Alu -11 301 1 6218 73 8 16 chr2 20455743 20455897 -232800686 - L1PA10 LINE L1 -679 5489 5335 598 227 37 12 chr2 20456295 20456458 -232800125 - L1M4 LINE L1 -1185 5459 5293 1502 243 26 31 chr2 20456464 20456847 -232799736 - L1M4 LINE L1 -5672 870 490 1361 228 99 50 chr2 20456857 20457156 -232799427 - L1M4 LINE L1 -6119 423 97 784 203 0 0 chr2 20457156 20457289 -232799294 + FLAM_C SINE Alu 1 133 0 1361 228 99 50 chr2 20457289 20457392 -232799191 - L1M4 LINE L1 -6445 97 1 2116 112 0 0 chr2 20457428 20457722 -232798861 - AluSg SINE Alu -16 294 1 357 167 0 0 chr2 20457722 20457782 -232798801 + MER69 DNA AcHobo 2467 2526 0 1406 205 35 35 chr2 20458067 20458408 -232798175 + MER58B DNA MER1_type 1 341 0 282 319 25 4 chr2 20458767 20458957 -232797626 + HERVR LTR ERV1 3950 4206 -3019 28 86 0 0 chr2 20458966 20459036 -232797547 + AT_rich Low_complexity Low_complexity 1 70 0 1754 130 48 0 chr2 20459217 20459509 -232797074 - AluSx SINE Alu 0 305 1 830 103 0 9 chr2 20459944 20460060 -232796523 + FLAM_C SINE Alu 3 117 -26 857 195 0 65 chr2 20460449 20460649 -232795934 - AluJ SINE Alu -14 298 112 498 222 94 0 chr2 20460988 20461105 -232795478 - MER58B DNA MER1_type 0 341 214 662 178 0 0 chr2 20461121 20461228 -232795355 - AluJ SINE Alu -203 109 3 2185 117 0 0 chr2 20462232 20462540 -232794043 - AluSx SINE Alu -4 308 1 195 296 110 19 chr2 20462862 20463002 -232793581 - MIR SINE MIR -63 145 22 226 193 72 84 chr2 20463503 20463586 -232792997 + MIR SINE MIR 110 191 -71 269 229 0 16 chr2 20463833 20463894 -232792689 - MER58A DNA MER1_type 0 224 165 1558 221 52 27 chr2 20463894 20464297 -232792286 - LTR47B LTR ERVL 0 443 31 1478 136 23 125 chr2 20464308 20464661 -232791922 - AluYb8 SINE Alu -1 317 1 819 198 76 0 chr2 20464701 20464858 -232791725 - MER58A DNA MER1_type -55 169 1 1005 127 19 0 chr2 20465468 20465625 -232790958 - AluSg/x SINE Alu -27 283 124 235 225 191 0 chr2 20468249 20468338 -232788245 - MLT1I LTR MaLR -26 383 278 324 295 54 39 chr2 20468502 20468631 -232787952 - MLT1I LTR MaLR -266 143 13 2275 92 0 6 chr2 20468638 20468952 -232787631 + AluSx SINE Alu 1 312 0 31 26 0 0 chr2 20470055 20470093 -232786490 + AT_rich Low_complexity Low_complexity 1 38 0 821 128 8 0 chr2 20470093 20470210 -232786373 - FLAM_C SINE Alu -15 118 1 1238 135 0 0 chr2 20470796 20470966 -232785617 + AluSx SINE Alu 2 171 -141 582 153 0 10 chr2 20472469 20472567 -232784016 - Tigger7 DNA MER2_type -1 2490 2394 1209 207 4 0 chr2 20472568 20472795 -232783788 - Tigger7 DNA MER2_type -2222 265 38 2530 243 59 22 chr2 20473280 20473992 -232782591 - MER21B LTR ERV1 -124 739 2 1720 142 12 12 chr2 20475061 20475315 -232781268 + AluSx SINE Alu 37 290 -22 279 183 28 70 chr2 20475316 20475387 -232781196 + MLT1I LTR MaLR 270 337 -72 1808 229 103 52 chr2 20475538 20475876 -232780707 + MER21B LTR ERV1 143 462 -401 768 197 0 0 chr2 20475876 20475998 -232780585 + FLAM_A SINE Alu 1 122 -11 1808 229 103 52 chr2 20475998 20476279 -232780304 + MER21B LTR ERV1 462 794 -69 317 113 75 0 chr2 20476313 20476366 -232780217 + MLT1I LTR MaLR 335 391 -18 685 80 0 0 chr2 20476782 20476870 -232779713 - 5S rRNA rRNA -33 88 1 2180 85 3 14 chr2 20476966 20477260 -232779323 - AluSc SINE Alu 0 309 19 814 142 63 0 chr2 20477300 20477427 -232779156 + FLAM_C SINE Alu 1 135 -8 2056 139 13 3 chr2 20477894 20478195 -232778388 + AluSx SINE Alu 4 307 -5 1529 126 0 0 chr2 20478352 20478575 -232778008 - L1PA14 LINE L1 -10 6151 5929 1596 225 16 31 chr2 20479005 20479392 -232777191 - MER57B LTR ERV1 -1 433 53 2500 101 0 0 chr2 20479397 20479704 -232776879 + AluSx SINE Alu 1 307 -5 2082 135 99 6 chr2 20479740 20480073 -232776510 - THE1B LTR MaLR 0 364 1 637 224 0 0 chr2 20480115 20480259 -232776324 + FLAM_A SINE Alu 1 144 0 2394 93 3 10 chr2 20481549 20481882 -232774701 - AluSx SINE Alu 0 331 1 284 120 20 0 chr2 20482080 20482130 -232774453 + CT-rich Low_complexity Low_complexity 3 53 0 757 220 8 0 chr2 20482130 20482262 -232774321 - FLAM_A SINE Alu 0 133 1 916 327 40 43 chr2 20482367 20482992 -232773591 - MER57-int LTR ERV1 -1338 6199 5573 2336 110 0 0 chr2 20482992 20483292 -232773291 - AluSc SINE Alu -9 300 1 916 327 40 43 chr2 20483292 20483524 -232773059 - MER57-int LTR ERV1 -1964 5573 2174 561 151 0 0 chr2 20483555 20483641 -232772942 + FAM SINE Alu 88 173 -12 376 221 0 0 chr2 20483642 20483728 -232772855 - L1 LINE L1 -3368 3799 3714 * 12017 181 23 36 chr2 20483715 20487016 -232769567 - L1 LINE L1 -3709 3458 195 2487 51 34 0 chr2 20487016 20487310 -232769273 - AluY SINE Alu -7 304 1 12017 181 23 36 chr2 20487310 20487491 -232769092 - L1 LINE L1 -6972 195 13 12547 116 77 27 chr2 20487878 20489014 -232767569 - L1PBa LINE L1 -3430 3432 2354 2217 128 3 3 chr2 20489014 20489312 -232767271 - AluSq SINE Alu -15 298 1 12547 116 77 27 chr2 20489312 20490329 -232766254 - L1PBa LINE L1 -4508 2354 1116 2334 48 0 0 chr2 20490329 20490602 -232765981 - AluY SINE Alu -4 307 35 12547 116 77 27 chr2 20490602 20491126 -232765457 - L1PBa LINE L1 -5746 1116 620 824 194 100 0 chr2 20491106 20491286 -232765297 - L1PBa LINE L1 -6663 200 3 * 21 0 0 0 chr2 20492725 20492746 -232763837 + AT_rich Low_complexity Low_complexity 1 21 0 2211 107 3 19 chr2 20492746 20493056 -232763527 + AluSp SINE Alu 1 305 -8 861 156 0 0 chr2 20493089 20493211 -232763372 - AluJ SINE Alu -23 289 168 2181 71 21 7 chr2 20493480 20493783 -232762800 - AluSq SINE Alu 0 307 1 2343 91 3 0 chr2 20493923 20494219 -232762364 - AluSp SINE Alu -16 297 1 356 250 0 0 chr2 20494335 20494415 -232762168 - MER96 DNA MER1_type? 0 175 96 186 314 127 34 chr2 20494463 20494581 -232762002 + MIR SINE MIR 119 247 -15 454 198 20 20 chr2 20494737 20494838 -232761745 + MER5B DNA MER1_type 4 104 -74 22 35 0 0 chr2 20496187 20496216 -232760367 + AT_rich Low_complexity Low_complexity 1 29 0 1210 160 0 11 chr2 20496667 20496848 -232759735 - AluJ SINE Alu -133 179 1 718 278 71 31 chr2 20497243 20497498 -232759085 - MER57B-int LTR ERV1 -7270 267 3 1474 205 79 70 chr2 20497502 20497932 -232758651 - MER57B LTR ERV1 0 434 1 2158 92 3 14 chr2 20499119 20499413 -232757170 + AluSx SINE Alu 1 291 -21 2301 115 3 0 chr2 20499668 20499964 -232756619 - AluSp SINE Alu -16 297 1 197 171 12 37 chr2 20500497 20500579 -232756004 + CT-rich Low_complexity Low_complexity 2 81 0 378 215 131 8 chr2 20501727 20501857 -232754726 - LTR50 LTR ERVL -577 218 73 473 288 122 40 chr2 20501916 20502194 -232754389 + L2 LINE L2 2962 3262 -10 822 258 190 5 chr2 20502322 20502543 -232754040 - MIR SINE MIR 0 262 1 372 185 97 18 chr2 20502996 20503129 -232753454 - MIR SINE MIR -62 146 11 275 126 18 189 chr2 20503993 20504104 -232752479 + MER53 DNA DNA 3 94 -95 * 305 202 48 0 chr2 20504033 20504117 -232752466 - MER53 DNA DNA -8 181 94 261 0 0 0 chr2 20504401 20504430 -232752153 + (CAG)n Simple_repeat Simple_repeat 1 29 0 1218 201 81 116 chr2 20504433 20504571 -232752012 + MLT2B1 LTR ERVL 2 143 -377 1486 164 9 4 chr2 20504571 20504802 -232751781 - AluSx SINE Alu -80 232 1 1218 201 81 116 chr2 20504802 20505120 -232751463 + MLT2B1 LTR ERVL 143 442 -78 1721 168 25 11 chr2 20505163 20505443 -232751140 - AluJb SINE Alu -22 290 7 384 22 0 0 chr2 20505473 20505518 -232751065 + (CA)n Simple_repeat Simple_repeat 2 46 0 642 207 21 14 chr2 20505556 20505696 -232750887 + MER5A DNA MER1_type 39 179 -10 1993 122 72 31 chr2 20505953 20506313 -232750270 + THE1C LTR MaLR 1 375 0 261 290 70 30 chr2 20506473 20506573 -232750010 + MIR SINE MIR 48 151 -57 914 310 28 5 chr2 20506745 20507168 -232749415 + ERVL LTR ERVL 3116 3548 -2216 247 210 0 16 chr2 20507369 20507431 -232749152 + (TTCA)n Simple_repeat Simple_repeat 4 64 0 200 236 179 80 chr2 20507516 20507545 -232749038 + L2 LINE L2 1657 1682 -1632 1840 157 0 46 chr2 20507545 20507850 -232748733 + AluJo SINE Alu 1 291 -21 200 236 179 80 chr2 20507850 20508032 -232748551 + L2 LINE L2 1682 1889 -1425 495 347 99 39 chr2 20508054 20508226 -232748357 + L2 LINE L2 2554 2714 -558 2060 158 45 21 chr2 20508226 20508607 -232747976 - MLT1B LTR MaLR 0 390 1 495 347 99 39 chr2 20508607 20508915 -232747668 + L2 LINE L2 2714 3054 -218 298 313 12 0 chr2 20508953 20509036 -232747547 + L2 LINE L2 3226 3309 -4 707 252 88 35 chr2 20509236 20509617 -232746966 + MLT1H LTR MaLR 3 389 -166 311 308 109 14 chr2 20510184 20510405 -232746178 + L1ME3A LINE L1 5707 5948 -222 1937 161 7 0 chr2 20511206 20511511 -232745072 + AluJo SINE Alu 1 307 -5 339 319 35 18 chr2 20511631 20511744 -232744839 + MIR SINE MIR 40 154 -108 39 22 0 0 chr2 20512424 20512470 -232744113 + AT_rich Low_complexity Low_complexity 1 46 0 574 225 125 12 chr2 20512587 20512747 -232743836 - MER5A DNA MER1_type -2 187 10 289 122 65 9 chr2 20513029 20513136 -232743447 + (CA)n Simple_repeat Simple_repeat 2 114 0 1884 148 27 20 chr2 20513286 20513584 -232742999 - AluJb SINE Alu -12 300 1 273 232 161 18 chr2 20513587 20513699 -232742884 + L2 LINE L2 2623 2750 -564 1124 164 86 33 chr2 20513766 20514010 -232742573 + MER68 LTR ERV1 3 259 -303 249 33 0 0 chr2 20514030 20514060 -232742523 + (GA)n Simple_repeat Simple_repeat 2 31 0 2249 107 0 0 chr2 20514075 20514364 -232742219 - AluSc SINE Alu -20 289 1 1988 170 61 15 chr2 20514364 20514759 -232741824 - MLT2C2 LTR ERVL -49 415 3 2376 95 0 3 chr2 20514761 20515067 -232741516 + AluSx SINE Alu 2 306 -6 1192 194 54 67 chr2 20515077 20515391 -232741192 + MER68 LTR ERV1 249 558 -4 180 312 104 13 chr2 20515477 20515554 -232741029 + L2 LINE L2 2937 3020 -252 445 199 176 0 chr2 20515554 20515685 -232740898 - MLT1G1 LTR MaLR 0 555 402 502 322 7 7 chr2 20515720 20515872 -232740711 - MLT1G1 LTR MaLR -220 375 224 206 185 93 19 chr2 20516184 20516238 -232740345 + L2 LINE L2 3151 3208 -64 2859 135 71 29 chr2 20516542 20517062 -232739521 + L1PB4 LINE L1 5613 6154 -2 209 161 0 0 chr2 20517909 20517940 -232738643 + polypyrimidine Low_complexity Low_complexity 2 32 0 774 160 0 8 chr2 20517962 20518081 -232738502 - FLAM_C SINE Alu -15 118 1 406 264 96 2 chr2 20518227 20518347 -232738236 - MIR SINE MIR -60 148 28 1814 163 57 0 chr2 20518723 20518889 -232737694 - AluJo SINE Alu -12 300 110 306 0 0 0 chr2 20518889 20518923 -232737660 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 1814 163 57 0 chr2 20518923 20519039 -232737544 - AluJo SINE Alu -202 110 2 231 318 0 0 chr2 20519046 20519112 -232737471 + L2 LINE L2 2980 3045 -227 1349 184 33 45 chr2 20519740 20519823 -232736760 - Charlie5 DNA MER1_type 0 2624 2541 2101 159 0 10 chr2 20519823 20520137 -232736446 + AluSx SINE Alu 1 311 -1 1349 184 33 45 chr2 20520137 20520449 -232736134 - Charlie5 DNA MER1_type -83 2541 2234 579 160 0 9 chr2 20520452 20520558 -232736025 - Charlie5 DNA MER1_type -2497 115 11 2501 68 0 3 chr2 20520917 20521227 -232735356 - AluY SINE Alu -2 309 1 2905 3 0 0 chr2 20521315 20521620 -232734963 - AluY SINE Alu -5 306 2 22 0 0 0 chr2 20522032 20522054 -232734529 + AT_rich Low_complexity Low_complexity 1 22 0 198 103 0 0 chr2 20522083 20522112 -232734471 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 1964 142 7 0 chr2 20522380 20522682 -232733901 + AluSx SINE Alu 1 304 0 26 0 0 0 chr2 20523336 20523362 -232733221 + GC_rich Low_complexity Low_complexity 1 26 0 1548 175 15 58 chr2 20523613 20523939 -232732644 - AluJo SINE Alu 0 312 1 274 256 122 0 chr2 20524032 20524114 -232732469 - L2 LINE L2 -13 3259 3168 207 69 0 0 chr2 20524122 20524151 -232732432 + (CAGAGA)n Simple_repeat Simple_repeat 5 33 0 361 172 42 81 chr2 20524673 20525046 -232731537 + (TATTG)n Simple_repeat Simple_repeat 1 358 0 245 51 26 0 chr2 20525420 20525459 -232731124 + (TG)n Simple_repeat Simple_repeat 2 41 0 24 32 0 0 chr2 20526118 20526149 -232730434 + GC_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr2 20527384 20527413 -232729170 + AT_rich Low_complexity Low_complexity 1 29 0 1007 189 22 0 chr2 20530226 20530406 -232726177 - MER5A DNA MER1_type -5 184 1 1754 161 34 10 chr2 20530640 20530931 -232725652 - AluJo SINE Alu -10 302 5 362 271 50 122 chr2 20530992 20531295 -232725288 - L2 LINE L2 -28 3244 2964 299 322 11 11 chr2 20531854 20531944 -232724639 - L2 LINE L2 -36 3236 3147 323 187 40 13 chr2 20531976 20532051 -232724532 - MLT1F LTR MaLR -465 77 1 543 194 121 0 chr2 20532053 20532177 -232724406 - MIR SINE MIR -91 171 33 266 321 166 25 chr2 20532224 20532501 -232724082 - L2 LINE L2 -629 2685 2370 1556 180 20 27 chr2 20533016 20533311 -232723272 + AluJo SINE Alu 8 300 -12 1811 164 0 30 chr2 20533357 20533655 -232722928 - AluJb SINE Alu -23 289 1 389 289 33 16 chr2 20534254 20534375 -232722208 + L2 LINE L2 3191 3313 0 1997 130 23 23 chr2 20534529 20534828 -232721755 + AluSx SINE Alu 1 299 -13 452 165 11 0 chr2 20534840 20534931 -232721652 + GA-rich Low_complexity Low_complexity 2 93 0 1390 148 28 5 chr2 20536292 20536508 -232720075 - AluJo SINE Alu -7 305 85 344 306 126 28 chr2 20536547 20536754 -232719829 + MIR3 SINE MIR 3 256 -6 280 281 117 39 chr2 20536847 20536975 -232719608 + L2 LINE L2 3168 3305 -8 873 158 0 0 chr2 20537003 20537136 -232719447 + AluJb SINE Alu 1 133 -179 31086 107 7 57 chr2 20537145 20543626 -232712957 + L1PA7 LINE L1 5 6154 0 195 129 0 0 chr2 20543686 20543717 -232712866 + (A)n Simple_repeat Simple_repeat 1 31 0 239 341 41 32 chr2 20543808 20543931 -232712652 + MER5A DNA MER1_type 63 186 -3 1003 183 0 50 chr2 20544190 20544392 -232712191 + AluJb SINE Alu 120 311 -1 2814 7 0 0 chr2 20545760 20546058 -232710525 + AluYa5 SINE Alu 1 298 -13 252 316 94 41 chr2 20547063 20547234 -232709349 + L2 LINE L2 3006 3185 -87 482 313 71 30 chr2 20547278 20547546 -232709037 + L3 LINE CR1 1275 1553 -24 374 273 74 8 chr2 20547795 20547916 -232708667 + L2 LINE L2 3184 3312 -1 384 293 78 0 chr2 20548125 20548241 -232708342 + L2 LINE L2 3184 3308 -5 637 213 8 0 chr2 20548404 20548531 -232708052 + MER45A DNA AcHobo 51 178 0 2176 119 18 49 chr2 20549045 20549432 -232707151 - THE1C LTR MaLR 0 375 1 2271 159 83 8 chr2 20549738 20550134 -232706449 - MSTB LTR MaLR 0 426 1 532 272 77 18 chr2 20550551 20550720 -232705863 - MIR3 SINE MIR -11 197 19 192 361 12 0 chr2 20550874 20550957 -232705626 - L2 LINE L2 -1 3271 3188 185 361 0 14 chr2 20551000 20551072 -232705511 - L3 LINE CR1 -62 1515 1445 205 330 177 7 chr2 20551232 20551351 -232705232 - MIR SINE MIR -1 207 70 274 321 128 24 chr2 20551892 20552141 -232704442 - L3 LINE CR1 -3 1574 1300 2227 103 14 3 chr2 20552521 20552812 -232703771 - AluSx SINE Alu -18 294 1 241 282 13 0 chr2 20553644 20553722 -232702861 + (TG)n Simple_repeat Simple_repeat 1 79 0 248 271 0 0 chr2 20554714 20554773 -232701810 + L2 LINE L2 3248 3306 -7 2270 137 98 3 chr2 20554776 20555162 -232701421 - MSTA LTR MaLR -2 426 4 234 263 92 99 chr2 20555434 20555586 -232700997 - MIR SINE MIR -56 206 56 245 280 9 103 chr2 20556358 20556407 -232700176 - MIR SINE MIR -70 192 156 2164 113 3 0 chr2 20556407 20556734 -232699849 - AluSq SINE Alu 0 328 1 245 280 9 103 chr2 20556734 20556790 -232699793 - MIR SINE MIR -106 156 96 1903 251 48 13 chr2 20556790 20557173 -232699410 + MER90 LTR ERV1 1 410 -165 2806 82 3 3 chr2 20557173 20557528 -232699055 + THE1A LTR MaLR 1 355 0 1903 251 48 13 chr2 20557528 20557691 -232698892 + MER90 LTR ERV1 410 566 -9 251 208 39 104 chr2 20557700 20557777 -232698806 - MIR SINE MIR -163 99 28 580 235 87 11 chr2 20558465 20558645 -232697938 - MIR SINE MIR -60 202 6 216 0 0 0 chr2 20558769 20558793 -232697790 + (CTG)n Simple_repeat Simple_repeat 1 24 0 1002 244 85 3 chr2 20558793 20559100 -232697483 + LTR16A LTR ERVL 119 450 0 2366 89 20 0 chr2 20559365 20559668 -232696915 + AluSc SINE Alu 1 309 0 832 73 9 0 chr2 20559682 20559791 -232696792 + HY1 scRNA scRNA 2 111 -1 278 318 65 9 chr2 20559978 20560085 -232696498 - L2 LINE L2 -18 3254 3142 788 185 99 0 chr2 20560164 20560326 -232696257 + AluJo SINE Alu 120 297 -15 2277 104 0 16 chr2 20560328 20560657 -232695926 + AluSq SINE Alu 1 313 0 251 318 65 26 chr2 20561113 20561267 -232695316 + L2 LINE L2 2924 3083 -189 207 0 0 0 chr2 20561689 20561712 -232694871 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 1928 146 30 7 chr2 20561836 20562137 -232694446 - AluSx SINE Alu -4 308 1 208 284 14 0 chr2 20562176 20562250 -232694333 + (TG)n Simple_repeat Simple_repeat 2 76 0 196 265 0 0 chr2 20562867 20562916 -232693667 - MIR SINE MIR -65 143 95 1616 188 34 28 chr2 20563608 20563965 -232692618 + MLT1A2 LTR MaLR 1 359 -15 212 283 0 19 chr2 20564907 20564960 -232691623 + G-rich Low_complexity Low_complexity 3 54 0 246 62 0 0 chr2 20565085 20565117 -232691466 + (TCCCC)n Simple_repeat Simple_repeat 2 33 0 2219 120 7 3 chr2 20565145 20565454 -232691129 - AluSx SINE Alu -2 310 1 272 191 62 80 chr2 20565824 20565937 -232690646 - MIR SINE MIR -67 141 47 187 323 92 0 chr2 20567523 20567588 -232688995 - L3 LINE CR1 -1 1576 1506 304 304 36 0 chr2 20567664 20567776 -232688807 + MLT1J2 LTR MaLR 39 154 -296 243 147 200 53 chr2 20567969 20568044 -232688539 + MLT1I LTR MaLR 315 400 -9 238 356 30 30 chr2 20568054 20568189 -232688394 - L3 LINE CR1 -107 1470 1336 2178 118 23 3 chr2 20568202 20568506 -232688077 - AluSx SINE Alu 0 312 3 816 204 16 54 chr2 20568534 20568624 -232687959 - MER5A DNA MER1_type -5 184 103 1762 176 19 53 chr2 20568624 20568999 -232687584 + MLT1A1 LTR MaLR 1 362 -3 816 204 16 54 chr2 20568999 20569094 -232687489 - MER5A DNA MER1_type -86 103 6 291 288 61 38 chr2 20569247 20569379 -232687204 + L2 LINE L2 3138 3272 0 195 225 11 34 chr2 20570113 20570202 -232686381 + CT-rich Low_complexity Low_complexity 1 87 0 712 265 78 24 chr2 20570210 20570580 -232686003 - L1MC5 LINE L1 -35 7926 7537 386 241 82 17 chr2 20571438 20571604 -232684979 + L1ME4a LINE L1 5436 5607 -514 1477 180 13 49 chr2 20571610 20571626 -232684957 - AluJo SINE Alu -11 301 286 190 0 0 0 chr2 20571626 20571647 -232684936 + (TTA)n Simple_repeat Simple_repeat 2 180 0 1477 180 13 49 chr2 20571647 20571800 -232684783 - AluJo SINE Alu -26 286 145 2075 138 17 0 chr2 20571800 20572089 -232684494 - AluSx SINE Alu -12 300 7 1477 180 13 49 chr2 20572089 20572224 -232684359 - AluJo SINE Alu -167 145 7 679 270 95 5 chr2 20572238 20572460 -232684123 - L2 LINE L2 0 3313 3072 442 318 103 26 chr2 20572464 20572799 -232683784 + L1ME4a LINE L1 5608 5977 -144 2353 88 3 0 chr2 20572799 20573107 -232683476 + AluSq SINE Alu 1 309 -4 442 318 103 26 chr2 20573107 20573149 -232683434 + L1ME4a LINE L1 5977 6014 -107 405 288 8 38 chr2 20573609 20573741 -232682842 - MIR SINE MIR -115 147 20 508 260 80 30 chr2 20574039 20574239 -232682344 - MIR SINE MIR 0 262 53 1734 137 43 47 chr2 20574254 20574554 -232682029 - AluJb SINE Alu -13 299 1 266 111 0 0 chr2 20574689 20574734 -232681849 + MADE1 DNA Mariner 1 45 -35 490 276 19 26 chr2 20574799 20574955 -232681628 - MIR SINE MIR -105 157 3 347 320 35 23 chr2 20577174 20577230 -232679353 - MIR SINE MIR -6 256 202 324 0 0 0 chr2 20577230 20577266 -232679317 + (TG)n Simple_repeat Simple_repeat 1 36 0 347 320 35 23 chr2 20577266 20577284 -232679299 - MIR SINE MIR -60 202 186 3645 173 28 17 chr2 20577284 20578005 -232678578 - L1MB7 LINE L1 -19 6165 5437 347 320 35 23 chr2 20578005 20578101 -232678482 - MIR SINE MIR -76 186 83 211 298 14 116 chr2 20578884 20579099 -232677484 - L2 LINE L2 -95 3177 2985 1553 120 4 12 chr2 20579509 20579750 -232676833 + AluY SINE Alu 72 310 -1 2903 208 20 85 chr2 20580096 20581033 -232675550 - LTR5 LTR ERVK -93 876 1 2028 96 0 30 chr2 20581192 20581516 -232675067 - AluY SINE Alu 0 311 1 1384 249 62 48 chr2 20581791 20582453 -232674130 - L1MC5 LINE L1 -385 7576 6906 2014 88 3 114 chr2 20582465 20582817 -232673766 - AluSq SINE Alu 0 313 1 911 182 61 74 chr2 20582818 20583049 -232673534 - L1MC5 LINE L1 -1041 6920 6693 1793 202 16 47 chr2 20583049 20583435 -232673148 - MLT1A2 LTR MaLR 0 374 1 1549 269 58 33 chr2 20583442 20583694 -232672889 - L1MC5 LINE L1 -1866 5942 5698 1869 128 62 0 chr2 20583694 20583984 -232672599 - AluSx SINE Alu -4 308 1 1549 269 58 33 chr2 20583984 20584329 -232672254 - L1MC5 LINE L1 -2110 5698 5330 22 35 0 0 chr2 20584400 20584429 -232672154 + AT_rich Low_complexity Low_complexity 1 29 0 986 207 78 18 chr2 20585761 20586155 -232670428 + L1MC/D LINE L1 5067 5491 -743 847 252 48 9 chr2 20586579 20586809 -232669774 - MIR SINE MIR 0 262 24 468 203 15 60 chr2 20586948 20587051 -232669532 - MLT1J1 LTR MaLR -317 129 32 2135 113 0 43 chr2 20587051 20587377 -232669206 + AluSx SINE Alu 1 312 0 468 203 15 60 chr2 20587377 20587406 -232669177 - MLT1J1 LTR MaLR -414 32 3 1455 136 35 112 chr2 20587422 20587761 -232668822 - AluYb8 SINE Alu -5 313 1 265 242 55 86 chr2 20588672 20588800 -232667783 + MIR SINE MIR 61 184 -78 340 291 48 0 chr2 20588991 20589094 -232667489 + MLT1L LTR MaLR 195 302 -313 1731 137 3 61 chr2 20589102 20589430 -232667153 + AluJb SINE Alu 3 311 -1 477 176 130 38 chr2 20589519 20589650 -232666933 - MLT1C LTR MaLR -324 143 1 353 178 129 40 chr2 20589675 20589776 -232666807 - MLT1C LTR MaLR -352 115 6 747 289 81 65 chr2 20589784 20590613 -232665970 + L2 LINE L2 2481 3313 0 2287 100 0 0 chr2 20591470 20591781 -232664802 + AluSx SINE Alu 1 311 -1 284 295 86 60 chr2 20591962 20592086 -232664497 + L2 LINE L2 2618 2737 -577 2269 107 0 0 chr2 20592086 20592395 -232664188 + AluSx SINE Alu 1 309 -3 284 295 86 60 chr2 20592395 20592606 -232663977 + L2 LINE L2 2737 2962 -352 1594 251 42 20 chr2 20592615 20593065 -232663518 + MLT1C LTR MaLR 1 460 -7 277 373 85 0 chr2 20593389 20593507 -232663076 - L2 LINE L2 -4 3309 3182 182 340 21 21 chr2 20593718 20593812 -232662771 - MIR SINE MIR -61 147 54 2028 129 64 45 chr2 20593952 20594309 -232662274 - THE1B LTR MaLR 0 364 1 230 259 123 25 chr2 20594845 20594926 -232661657 - L2 LINE L2 0 3272 3184 2097 116 0 26 chr2 20596632 20596943 -232659640 - AluSx SINE Alu -9 303 1 189 331 88 38 chr2 20597118 20597381 -232659202 - L2 LINE L2 -344 2970 2695 1471 220 39 33 chr2 20597492 20597855 -232658728 + MLT1A1 LTR MaLR 1 365 0 389 235 35 35 chr2 20599455 20599570 -232657013 + MIR SINE MIR 20 134 -74 446 293 152 10 chr2 20599599 20599797 -232656786 - MIR SINE MIR -12 250 25 1419 221 140 35 chr2 20599799 20599893 -232656690 + MLT1D LTR MaLR 1 84 -421 1594 178 49 0 chr2 20599893 20600179 -232656404 + AluJb SINE Alu 1 300 -12 1419 221 140 35 chr2 20600179 20600541 -232656042 + MLT1D LTR MaLR 84 505 0 2126 128 0 0 chr2 20601629 20601934 -232654649 + AluSg SINE Alu 1 305 -5 318 294 18 9 chr2 20602442 20602551 -232654032 + MER94 DNA DNA 10 119 -15 320 197 15 15 chr2 20604588 20604654 -232651929 - MIR SINE MIR -176 86 21 539 271 127 14 chr2 20604807 20605028 -232651555 + MIR SINE MIR 17 262 0 180 176 0 0 chr2 20605080 20605114 -232651469 + (TATATG)n Simple_repeat Simple_repeat 3 36 0 660 311 48 4 chr2 20605877 20606105 -232650478 - MIR SINE MIR -1 261 24 325 306 100 19 chr2 20606130 20606290 -232650293 - MIR SINE MIR -23 239 67 465 261 99 0 chr2 20607212 20607354 -232649229 - MER103 DNA DNA -9 157 2 274 306 162 14 chr2 20607580 20607796 -232648787 - L2 LINE L2 -40 3232 2985 1834 148 21 0 chr2 20608926 20609216 -232647367 - AluJb SINE Alu -16 296 1 291 214 71 0 chr2 20609216 20609277 -232647306 - L2 LINE L2 -7 3265 3197 1982 141 0 3 chr2 20609681 20609980 -232646603 - AluSx SINE Alu -14 298 1 371 294 76 0 chr2 20610913 20611032 -232645551 + MIR SINE MIR 16 143 -65 252 152 22 0 chr2 20611522 20611568 -232645015 + L2 LINE L2 3223 3269 -3 2031 125 3 10 chr2 20612230 20612541 -232644042 - AluSx SINE Alu -3 309 1 204 308 122 17 chr2 20613291 20613463 -232643120 - L2 LINE L2 -167 3105 2916 654 204 9 0 chr2 20613531 20613644 -232642939 + MER81 DNA DNA 1 114 0 872 164 68 53 chr2 20614293 20614529 -232642054 + AluJb SINE Alu 76 314 0 2071 97 35 3 chr2 20614778 20615068 -232641515 + AluSx SINE Alu 1 299 -13 742 106 176 24 chr2 20615073 20615243 -232641340 + L1MB4 LINE L1 5985 6180 0 * 1639 142 36 45 chr2 20615241 20615578 -232641005 + L1MD3 LINE L1 7652 7985 -10 3716 179 41 8 chr2 20616068 20616772 -232639811 - LTR8A LTR ERV1 0 727 1 417 330 86 14 chr2 20617980 20618201 -232638382 - MIR SINE MIR -6 256 20 226 200 36 0 chr2 20619734 20619789 -232636794 - L2 LINE L2 -213 3059 3003 247 286 26 13 chr2 20622034 20622111 -232634472 - MIR SINE MIR -110 152 75 391 274 76 30 chr2 20622373 20622570 -232634013 + MIR SINE MIR 47 252 -10 8353 79 5 10 chr2 20623584 20624661 -232631922 - MER11C LTR ERVK 0 1071 1 328 253 0 35 chr2 20624710 20624797 -232631786 - L2 LINE L2 -5 3308 3225 1415 192 58 10 chr2 20624806 20625258 -232631325 + MLT1F1 LTR MaLR 10 567 0 222 339 119 26 chr2 20625520 20625898 -232630685 - L2 LINE L2 -453 2861 2449 1580 214 35 6 chr2 20626088 20626430 -232630153 + MLT1A2 LTR MaLR 8 359 -15 1043 222 38 8 chr2 20626593 20626859 -232629724 + Charlie1b DNA MER1_type 53 326 -197 674 141 0 0 chr2 20626873 20626965 -232629618 + AluSx SINE Alu 2 93 -219 1347 118 29 0 chr2 20627022 20627226 -232629357 + AluSx SINE Alu 103 312 0 992 151 5 24 chr2 20627226 20627431 -232629152 + Charlie1b DNA MER1_type 323 523 0 205 200 0 22 chr2 20628406 20628451 -232628132 + (TGAA)n Simple_repeat Simple_repeat 1 44 0 190 292 97 0 chr2 20629152 20629224 -232627359 + L2 LINE L2 2985 3063 -209 650 210 0 8 chr2 20629272 20629391 -232627192 + FLAM_C SINE Alu 2 119 -24 2047 86 0 0 chr2 20629517 20629785 -232626798 + AluY SINE Alu 40 307 -4 199 208 236 0 chr2 20629864 20629936 -232626647 - L2 LINE L2 -2 3311 3223 290 333 119 6 chr2 20630990 20631167 -232625416 + MIR SINE MIR 63 259 -3 1884 171 14 112 chr2 20631720 20631949 -232624634 - MSTD LTR MaLR 0 396 229 1820 149 7 7 chr2 20631949 20632245 -232624338 - AluJb SINE Alu -16 296 1 1884 171 14 112 chr2 20632245 20632454 -232624129 - MSTD LTR MaLR -167 229 1 1791 227 53 27 chr2 20632681 20633131 -232623452 - LTR40b LTR ERVL 0 462 1 2022 85 67 0 chr2 20633274 20633556 -232623027 + AluSq SINE Alu 1 301 -12 826 224 12 0 chr2 20634154 20634324 -232622259 - MER45A DNA AcHobo -5 173 2 345 160 53 0 chr2 20634458 20634552 -232622031 + CT-rich Low_complexity Low_complexity 2 100 0 391 249 89 30 chr2 20634908 20635077 -232621506 - HAL1 LINE L1 -105 2402 2224 454 193 132 89 chr2 20635905 20636118 -232620465 - HAL1 LINE L1 -891 1616 1395 192 267 100 0 chr2 20637922 20637982 -232618601 - MIR3 SINE MIR -34 174 109 1158 127 0 11 chr2 20638256 20638600 -232617983 + (TGGA)n Simple_repeat Simple_repeat 1 341 0 425 296 40 0 chr2 20639466 20639591 -232616992 - MIR SINE MIR -56 152 23 340 333 113 6 chr2 20640036 20640213 -232616370 + L2 LINE L2 3074 3269 -3 213 191 24 0 chr2 20640250 20640292 -232616291 + L2 LINE L2 3261 3303 -10 260 296 12 0 chr2 20640358 20640439 -232616144 + (CA)n Simple_repeat Simple_repeat 1 82 0 4118 191 27 46 chr2 20640535 20641031 -232615552 + MER21B LTR ERV1 1 476 -387 1913 154 3 3 chr2 20641031 20641342 -232615241 + AluJo SINE Alu 1 311 -1 4118 191 27 46 chr2 20641342 20641723 -232614860 + MER21B LTR ERV1 476 862 -1 257 159 63 0 chr2 20642087 20642150 -232614433 - MIR3 SINE MIR -38 170 104 623 175 3 1 chr2 20642620 20642733 -232613850 + MER5A DNA MER1_type 4 106 -72 328 321 57 13 chr2 20643018 20643177 -232613406 - L3 LINE CR1 -68 1509 1344 2038 145 3 0 chr2 20643307 20643618 -232612965 - AluSx SINE Alu 0 312 1 2323 95 0 0 chr2 20645435 20645741 -232610842 - AluSq SINE Alu -7 306 1 313 342 52 36 chr2 20645876 20646069 -232610514 - MIR SINE MIR -16 246 51 566 287 165 6 chr2 20647090 20647435 -232609148 - L2 LINE L2 -298 3015 2622 202 298 106 21 chr2 20647560 20647654 -232608929 - L2 LINE L2 -37 3235 3134 729 181 90 23 chr2 20648263 20648440 -232608143 + MER53 DNA DNA 1 189 0 278 333 65 0 chr2 20650811 20650934 -232605649 - MIR SINE MIR -62 146 16 412 304 163 9 chr2 20651300 20651527 -232605056 + MIR SINE MIR 1 262 0 226 186 14 129 chr2 20651824 20651894 -232604689 + MLT1E2 LTR MaLR 1 62 -564 516 261 46 20 chr2 20651897 20652050 -232604533 + MLT1C LTR MaLR 1 157 -348 619 194 60 8 chr2 20652059 20652193 -232604390 + MLT1C LTR MaLR 284 424 -43 442 333 36 0 chr2 20653650 20653837 -232602746 + MIR SINE MIR 4 200 -62 1583 153 47 14 chr2 20654817 20655115 -232601468 - AluJb SINE Alu 0 307 1 186 176 29 0 chr2 20655448 20655482 -232601101 + L2 LINE L2 3263 3297 -16 352 303 125 7 chr2 20657490 20657642 -232598941 - MIR SINE MIR -7 255 86 2081 136 3 3 chr2 20659070 20659379 -232597204 + AluSx SINE Alu 1 309 -3 619 294 22 15 chr2 20659414 20659645 -232596938 + L1ME4a LINE L1 5316 5548 -616 1686 215 97 63 chr2 20660109 20660170 -232596413 - MLT1E1 LTR MaLR -4 650 593 2287 112 0 0 chr2 20660170 20660482 -232596101 - AluSx SINE Alu 0 312 1 1686 215 97 63 chr2 20660482 20661005 -232595578 - MLT1E1 LTR MaLR -61 593 46 442 250 0 10 chr2 20662066 20662170 -232594413 - LTR67 LTR ERVL -22 535 433 594 315 25 30 chr2 20664083 20664130 -232592453 - MIR SINE MIR -15 247 201 528 225 117 0 chr2 20664130 20664250 -232592333 - MER94 DNA DNA 0 134 1 594 315 25 30 chr2 20664250 20664437 -232592146 - MIR SINE MIR -61 201 14 230 248 353 20 chr2 20664685 20664838 -232591745 - MIR SINE MIR -22 240 37 444 278 150 32 chr2 20665782 20666188 -232590395 + L1ME4a LINE L1 5515 5968 -153 1020 86 0 0 chr2 20666467 20666607 -232589976 + AluY SINE Alu 171 310 -1 235 268 118 0 chr2 20666962 20667089 -232589494 + L1ME4a LINE L1 5978 6119 -2 1758 103 7 39 chr2 20667178 20667459 -232589124 - AluSq SINE Alu -41 272 1 329 338 58 29 chr2 20667874 20668152 -232588431 - L3 LINE CR1 -202 1375 1090 218 350 29 0 chr2 20669605 20669708 -232586875 - MIR SINE MIR -77 185 80 1824 149 28 0 chr2 20670407 20670696 -232585887 - AluSx SINE Alu -15 297 1 655 174 35 0 chr2 20670999 20671114 -232585469 + AluSg/x SINE Alu 124 242 -68 237 266 231 6 chr2 20671210 20671379 -232585204 + L2 LINE L2 2553 2759 -555 506 224 75 0 chr2 20671382 20671489 -232585094 - MLT1D LTR MaLR -3 464 350 745 261 62 28 chr2 20671525 20671794 -232584789 - MLT1D LTR MaLR -190 277 1 622 254 131 30 chr2 20671795 20672266 -232584317 + L2 LINE L2 2756 3283 -30 186 43 0 0 chr2 20672272 20672295 -232584288 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 190 330 10 10 chr2 20672802 20672899 -232583684 + MIR SINE MIR 44 140 -68 508 249 75 35 chr2 20672916 20673089 -232583494 + MER117 DNA MER1_type 1 180 -17 1719 224 17 8 chr2 20673495 20673857 -232582726 - MLT1A1 LTR MaLR 0 365 1 342 277 0 24 chr2 20674105 20674188 -232582395 + MER91A DNA MER1_type 101 181 -15 2026 184 8 19 chr2 20675126 20675491 -232581092 + MLT1A1 LTR MaLR 3 363 -2 245 336 76 8 chr2 20676209 20676340 -232580243 + MIR3 SINE MIR 23 162 -46 3217 121 14 24 chr2 20676865 20677368 -232579215 - MER1A DNA MER1_type 0 529 32 2580 42 0 0 chr2 20677378 20677689 -232578894 - AluYa5 SINE Alu 0 311 1 360 0 0 0 chr2 20678441 20678481 -232578102 + (CA)n Simple_repeat Simple_repeat 2 41 0 267 250 40 48 chr2 20678593 20678717 -232577866 + MIR3 SINE MIR 68 190 -18 627 270 169 17 chr2 20679345 20679689 -232576894 + L1ME4a LINE L1 5721 6116 -5 22 0 0 0 chr2 20679689 20679711 -232576872 + AT_rich Low_complexity Low_complexity 1 22 0 2286 103 12 6 chr2 20680268 20680599 -232575984 + THE1B LTR MaLR 1 333 -31 958 50 0 0 chr2 20680599 20680720 -232575863 - AluY SINE Alu -1 310 190 4367 174 19 23 chr2 20681517 20682600 -232573983 + L1MB8 LINE L1 5098 6178 0 231 286 26 39 chr2 20682669 20682746 -232573837 + MIR SINE MIR 40 115 -93 444 301 173 9 chr2 20683350 20683574 -232573009 - MIR SINE MIR -11 251 1 3215 183 43 56 chr2 20684265 20685052 -232571531 - L1MB5 LINE L1 -13 6161 5385 5058 214 33 22 chr2 20685542 20685988 -232570595 - L1MB5 LINE L1 -744 5402 4962 2127 128 0 0 chr2 20685988 20686285 -232570298 - AluSx SINE Alu -15 297 1 5058 214 33 22 chr2 20686285 20687122 -232569461 - L1MB5 LINE L1 -1184 4962 4102 2328 88 3 0 chr2 20687122 20687429 -232569154 + AluSp SINE Alu 1 308 -5 5058 214 33 22 chr2 20687429 20687492 -232569091 - L1MB5 LINE L1 -2044 4102 4041 4449 142 21 27 chr2 20688873 20689619 -232566964 - L1MC1 LINE L1 0 6333 5592 1777 213 67 40 chr2 20689637 20690131 -232566452 - L1ME1 LINE L1 -7 6159 5653 895 224 25 0 chr2 20690859 20691060 -232565523 - MIR SINE MIR -2 260 55 2955 203 32 6 chr2 20691137 20691767 -232564816 - L1MB7 LINE L1 -9 6175 5530 1580 216 45 75 chr2 20692713 20693181 -232563402 + MLT1C LTR MaLR 6 459 -8 216 0 0 0 chr2 20696585 20696609 -232559974 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 272 380 51 28 chr2 20698423 20698639 -232557944 - MIR SINE MIR -27 235 15 421 294 28 0 chr2 20699017 20699160 -232557423 - MIR SINE MIR -59 203 57 285 321 83 13 chr2 20699394 20699589 -232556994 + MIR SINE MIR 13 212 -50 210 162 0 0 chr2 20700980 20701017 -232555566 + (TGAA)n Simple_repeat Simple_repeat 2 38 0 433 269 52 0 chr2 20704566 20704700 -232551883 + L1ME3 LINE L1 6002 6142 -20 311 237 11 32 chr2 20705213 20705306 -232551277 - MIR SINE MIR -63 145 55 250 356 0 34 chr2 20705779 20705956 -232550627 + CT-rich Low_complexity Low_complexity 1 171 0 * 336 419 0 0 chr2 20705834 20706001 -232550582 + C-rich Low_complexity Low_complexity 1 167 0 792 209 36 52 chr2 20706102 20706351 -232550232 - L1ME1 LINE L1 -606 5568 5324 2117 113 0 7 chr2 20706358 20706658 -232549925 - AluSc SINE Alu -11 298 1 2196 112 0 7 chr2 20706660 20706963 -232549620 - AluY SINE Alu -10 301 1 382 207 190 17 chr2 20707422 20707538 -232549045 - MER5A DNA MER1_type -6 183 48 187 263 53 0 chr2 20707850 20707907 -232548676 + MER5A DNA MER1_type 78 137 -52 401 150 0 0 chr2 20709178 20709238 -232547345 + AluS SINE Alu 2 61 -257 1545 145 0 0 chr2 20709288 20709522 -232547061 + AluSg/x SINE Alu 67 300 -12 236 286 14 0 chr2 20709557 20709627 -232546956 - L2 LINE L2 -178 3094 3024 1717 153 19 26 chr2 20711125 20711438 -232545145 - AluJo SINE Alu -1 311 1 1948 156 0 9 chr2 20712101 20712416 -232544167 + AluJb SINE Alu 1 312 0 1699 201 13 29 chr2 20712724 20713176 -232543407 + MER89 LTR ERV1 3 545 -14 323 310 101 0 chr2 20713903 20714059 -232542524 - MIR SINE MIR -49 159 23 218 242 30 136 chr2 20716166 20716298 -232540285 + MIR SINE MIR 53 170 -92 204 329 73 0 chr2 20716297 20716397 -232540186 + MIR SINE MIR 17 129 -79 * 592 229 68 36 chr2 20716462 20716654 -232539929 - MER112 DNA MER1_type -39 221 24 23 0 0 0 chr2 20716925 20716948 -232539635 + GC_rich Low_complexity Low_complexity 1 23 0 304 286 95 0 chr2 20717768 20717894 -232538689 - MIR SINE MIR -56 206 69 286 226 128 0 chr2 20719130 20719232 -232537351 + MER5C DNA MER1_type 2 116 -208 336 182 143 0 chr2 20719264 20719341 -232537242 + MER5C DNA MER1_type 233 320 -4 317 225 12 12 chr2 20719576 20719656 -232536927 - MIR SINE MIR -72 190 111 408 200 120 0 chr2 20720203 20720303 -232536280 - MIR SINE MIR -43 219 108 183 271 51 0 chr2 20722713 20722772 -232533811 - L2 LINE L2 -12 3301 3240 1741 150 0 36 chr2 20723537 20723844 -232532739 + AluJo SINE Alu 1 296 -16 394 326 190 14 chr2 20724106 20724538 -232532045 + L2 LINE L2 1991 2498 -816 484 270 172 34 chr2 20724825 20725121 -232531462 + L2 LINE L2 2915 3251 -21 295 286 62 26 chr2 20726706 20726898 -232529685 - MIR SINE MIR -45 217 19 359 313 230 10 chr2 20727050 20727350 -232529233 + L2 LINE L2 876 1241 -2073 439 110 315 24 chr2 20727398 20727525 -232529058 + MER5A DNA MER1_type 5 168 -21 358 227 27 0 chr2 20727566 20727641 -232528942 - MER58B DNA MER1_type -8 333 257 2873 279 142 21 chr2 20727760 20729418 -232527165 + L2 LINE L2 1445 3309 -4 205 322 0 0 chr2 20729764 20729823 -232526760 - MIR3 SINE MIR -50 158 100 198 243 81 0 chr2 20730404 20730478 -232526105 + L2 LINE L2 3172 3251 -21 195 217 17 17 chr2 20730593 20730653 -232525930 + MIR SINE MIR 86 145 -117 405 344 119 19 chr2 20732688 20733118 -232523465 - L2 LINE L2 -665 2649 2177 212 238 38 95 chr2 20733952 20734057 -232522526 - L2 LINE L2 -182 3090 2992 1851 147 47 3 chr2 20734706 20735005 -232521578 - AluJo SINE Alu 0 312 1 266 240 19 39 chr2 20735168 20735272 -232521311 - L2 LINE L2 -1274 2040 1939 1962 159 88 11 chr2 20735303 20735738 -232520845 - MER31A LTR ERV1 -12 649 4 486 284 85 13 chr2 20735876 20736193 -232520390 - L1ME4a LINE L1 -13 6108 5769 264 266 63 25 chr2 20737031 20737189 -232519394 - L1ME4a LINE L1 -747 5399 5236 681 227 142 45 chr2 20737367 20737614 -232518969 - LTR16A LTR ERVL -118 332 62 1404 241 71 80 chr2 20737679 20737851 -232518732 - L1MC4 LINE L1 -72 7970 7798 2493 101 24 24 chr2 20737851 20738226 -232518357 - THE1C LTR MaLR 0 375 1 1404 241 71 80 chr2 20738226 20738329 -232518254 - L1MC4 LINE L1 -244 7798 7696 2669 19 0 13 chr2 20738329 20738643 -232517940 - AluYa5 SINE Alu -1 310 1 1404 241 71 80 chr2 20738643 20738988 -232517595 - L1MC4 LINE L1 -346 7696 7355 418 318 98 47 chr2 20738990 20739396 -232517187 - L1ME4a LINE L1 -951 5195 4769 322 287 24 37 chr2 20739969 20740133 -232516450 - L1ME LINE L1 -551 5570 5409 321 287 47 67 chr2 20740142 20740292 -232516291 - L3 LINE CR1 -820 757 611 222 37 0 0 chr2 20740822 20740849 -232515734 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 248 358 47 28 chr2 20741080 20741295 -232515288 - MIR SINE MIR -32 230 10 187 281 188 0 chr2 20742106 20742202 -232514381 - MIR SINE MIR -62 146 33 1477 155 45 31 chr2 20742783 20743074 -232513509 + AluJo SINE Alu 18 312 0 337 296 162 22 chr2 20743075 20743254 -232513329 + L3 LINE CR1 1374 1577 0 396 295 78 36 chr2 20744068 20744234 -232512349 + MIR SINE MIR 56 228 -34 252 276 0 0 chr2 20744824 20744882 -232511701 - MIR SINE MIR -57 151 94 26 0 0 0 chr2 20746996 20747022 -232509561 + GC_rich Low_complexity Low_complexity 1 26 0 234 0 0 0 chr2 20747154 20747180 -232509403 + (CGG)n Simple_repeat Simple_repeat 2 27 0 22 0 0 0 chr2 20747236 20747258 -232509325 + GC_rich Low_complexity Low_complexity 1 22 0 241 262 60 0 chr2 20749525 20749609 -232506974 + MIR3 SINE MIR 85 173 -35 27 49 0 0 chr2 20750851 20750892 -232505691 + GC_rich Low_complexity Low_complexity 1 41 0 181 222 0 0 chr2 20755396 20755432 -232501151 + L3b LINE CR1 1546 1581 -2 180 0 0 0 chr2 20757748 20757768 -232498815 + (CAG)n Simple_repeat Simple_repeat 3 22 0 1666 205 103 0 chr2 20762223 20762574 -232494009 - MSTD LTR MaLR 0 396 10 270 262 246 0 chr2 20762582 20762704 -232493879 + MIR SINE MIR 56 207 -55 331 255 129 20 chr2 20763569 20763739 -232492844 - MIR SINE MIR -14 248 43 21 0 0 0 chr2 20763817 20763838 -232492745 + AT_rich Low_complexity Low_complexity 1 21 0 1125 211 97 7 chr2 20763886 20764184 -232492399 - L1MC4 LINE L1 -135 7907 7583 711 176 7 37 chr2 20764185 20764321 -232492262 - FLAM_C SINE Alu -1 132 1 186 329 55 0 chr2 20767836 20767909 -232488674 - L2 LINE L2 0 3313 3237 277 370 109 18 chr2 20768039 20768369 -232488214 - L2 LINE L2 -338 2976 2617 2971 45 8 0 chr2 20768619 20768976 -232487607 - L1PA7 LINE L1 0 6154 5795 476 278 58 23 chr2 20770618 20770791 -232485792 - MIR SINE MIR -35 227 49 1606 189 10 7 chr2 20770947 20771254 -232485329 - AluJb SINE Alu -4 308 1 212 376 65 0 chr2 20771893 20771986 -232484597 - L2 LINE L2 -40 3232 3134 580 281 104 13 chr2 20772761 20772992 -232483591 + MIR SINE MIR 2 253 -9 436 245 71 92 chr2 20775183 20775228 -232481355 - MIR SINE MIR 0 262 218 2425 71 10 0 chr2 20775228 20775524 -232481059 - AluSg SINE Alu -10 300 2 436 245 71 92 chr2 20775524 20775752 -232480831 - MIR SINE MIR -44 218 9 458 292 118 40 chr2 20776606 20777106 -232479477 + L2 LINE L2 2003 2541 -773 652 221 96 0 chr2 20777535 20777743 -232478840 + Charlie4 DNA MER1_type 37 264 -1697 418 209 82 0 chr2 20777788 20777898 -232478685 + Charlie4 DNA MER1_type 1840 1958 -3 248 340 60 0 chr2 20777925 20778025 -232478558 - L2 LINE L2 0 3313 3208 2230 104 27 0 chr2 20778184 20778482 -232478101 + AluSg SINE Alu 1 306 -4 26 0 0 0 chr2 20778557 20778583 -232478000 + AT_rich Low_complexity Low_complexity 1 26 0 1163 197 75 7 chr2 20780419 20780714 -232475869 - MER33 DNA MER1_type -4 320 6 307 271 141 31 chr2 20782069 20782261 -232474322 - L1 LINE L1 -3784 2362 2150 2064 99 25 3 chr2 20782619 20782902 -232473681 - AluSp SINE Alu -24 289 1 416 273 85 62 chr2 20782950 20783372 -232473211 - HAL1 LINE L1 -6 2501 2070 744 277 155 40 chr2 20783598 20783927 -232472656 - L2 LINE L2 -1 3312 2946 288 294 116 22 chr2 20784199 20784474 -232472109 + L1ME4a LINE L1 5754 6054 -67 1268 267 134 45 chr2 20784512 20785385 -232471198 - HAL1 LINE L1 -423 2084 1134 885 194 55 20 chr2 20785688 20785889 -232470694 + MER3 DNA MER1_type 2 209 0 1072 209 7 62 chr2 20786412 20786685 -232469898 + L1MEc LINE L1 39 296 -6100 1805 213 25 64 chr2 20786692 20787255 -232469328 + MER74B LTR ERVL 59 599 -23 621 228 91 53 chr2 20787269 20787554 -232469029 + L1MEc LINE L1 296 591 -5805 3088 125 4 6 chr2 20787564 20788036 -232468547 + MER1A DNA MER1_type 56 526 -3 1351 213 18 3 chr2 20788041 20788369 -232468214 + L1MEc LINE L1 587 919 -5477 2924 168 45 24 chr2 20788369 20788815 -232467768 + L1MB7 LINE L1 4903 5338 -846 1993 137 55 3 chr2 20788815 20789158 -232467425 + MER46B DNA MER2_type 1 236 0 2924 168 45 24 chr2 20789158 20789674 -232466909 + L1MB7 LINE L1 5338 5894 -290 1435 264 42 28 chr2 20789677 20790320 -232466263 + L1M4 LINE L1 2954 3605 -2541 198 0 0 0 chr2 20790361 20790383 -232466200 + (TG)n Simple_repeat Simple_repeat 2 23 0 309 287 11 11 chr2 20790383 20790470 -232466113 + L1MC4 LINE L1 6618 6704 -1338 * 321 211 11 63 chr2 20790451 20790546 -232466037 - L1MC4 LINE L1 -1339 6703 6614 405 236 184 51 chr2 20790601 20790894 -232465689 + MLT1E2 LTR MaLR 1 332 -294 2313 58 11 0 chr2 20790898 20791175 -232465408 + AluY SINE Alu 17 296 -15 30017 89 13 8 chr2 20791195 20795667 -232460916 + L1PA6 LINE L1 11 4503 -1643 6803 51 0 0 chr2 20795667 20796496 -232460087 + L1PA6 LINE L1 5300 6135 -19 204 40 0 0 chr2 20796496 20796521 -232460062 + (TA)n Simple_repeat Simple_repeat 2 26 0 574 209 81 27 chr2 20796525 20796782 -232459801 + MLT1E2 LTR MaLR 326 503 -2 939 256 85 25 chr2 20796782 20797288 -232459295 + L1P5 LINE L1 4894 5431 -720 248 192 48 48 chr2 20797450 20797554 -232459029 + L1MA4 LINE L1 3224 3327 -4238 183 42 0 0 chr2 20797554 20797578 -232459005 + (TG)n Simple_repeat Simple_repeat 2 25 0 801 182 8 0 chr2 20797578 20797710 -232458873 - AluJb SINE Alu -28 284 152 14951 168 32 14 chr2 20797751 20801191 -232455392 + L1MA4 LINE L1 3344 6853 -743 822 117 8 0 chr2 20801191 20801318 -232455265 + L1PB1 LINE L1 6020 6148 -3 4566 144 30 20 chr2 20801352 20801869 -232454714 + L1MA4 LINE L1 6851 7382 -337 2196 82 13 20 chr2 20801869 20802173 -232454410 + AluSx SINE Alu 4 305 -7 4566 144 30 20 chr2 20802173 20802513 -232454070 + L1MA4 LINE L1 7382 7717 -2 1558 256 81 14 chr2 20802545 20803161 -232453422 + L1ME3A LINE L1 5434 6073 -97 22 56 0 0 chr2 20803228 20803264 -232453319 + AT_rich Low_complexity Low_complexity 1 36 0 296 301 75 53 chr2 20804109 20804242 -232452341 + L2 LINE L2 3137 3272 0 643 254 33 77 chr2 20805561 20805860 -232450723 + MLT1J LTR MaLR 224 509 -2 204 67 0 0 chr2 20806776 20806806 -232449777 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 757 183 7 0 chr2 20806867 20807004 -232449579 + FLAM_C SINE Alu 1 138 -5 27 29 0 0 chr2 20809180 20809214 -232447369 + AT_rich Low_complexity Low_complexity 1 34 0 830 131 21 0 chr2 20809420 20809565 -232447018 - L1MD1 LINE L1 -1 6635 6488 1091 147 0 18 chr2 20809576 20809739 -232446844 - FRAM SINE Alu -24 152 1 3200 149 7 4 chr2 20809751 20810307 -232446276 - L1MD1 LINE L1 -254 6382 5825 1328 229 12 114 chr2 20810320 20810918 -232445665 - L1MD1 LINE L1 -1059 5481 4945 1851 159 54 11 chr2 20810918 20811288 -232445295 + MSTA LTR MaLR 1 386 -42 2730 199 99 153 chr2 20811305 20812635 -232443948 - L1MD1 LINE L1 -1592 4948 3548 767 163 0 22 chr2 20812635 20812770 -232443813 - FLAM_C SINE Alu -6 137 6 2730 199 99 153 chr2 20812770 20813009 -232443574 - L1MD1 LINE L1 -2992 3548 3353 1634 175 11 14 chr2 20813009 20813170 -232443413 - AluJo SINE Alu -16 296 135 2128 131 0 13 chr2 20813170 20813476 -232443107 - AluJb SINE Alu -10 302 1 1634 175 11 14 chr2 20813476 20813599 -232442984 - AluJo SINE Alu -177 135 13 2730 199 99 153 chr2 20813599 20813783 -232442800 - L1MD1 LINE L1 -3187 3353 3161 6634 206 106 17 chr2 20813843 20815907 -232440676 - L1MD1 LINE L1 -3768 2772 348 2197 115 0 0 chr2 20815932 20816220 -232440363 + AluSx SINE Alu 1 288 -24 2822 164 54 5 chr2 20816252 20816807 -232439776 + MER34C LTR ERV1 4 585 0 1552 176 42 10 chr2 20816813 20817120 -232439463 - L1MD1 LINE L1 -6208 332 16 273 363 18 9 chr2 20817366 20817479 -232439104 - MIR3 SINE MIR -82 126 13 2988 122 69 29 chr2 20817502 20817744 -232438839 + MER41C LTR ERV1 3 234 -320 2125 113 0 0 chr2 20817744 20818063 -232438520 + AluSg SINE Alu 1 319 0 2988 122 69 29 chr2 20818063 20818342 -232438241 + MER41C LTR ERV1 234 546 -8 206 157 14 143 chr2 20818360 20818430 -232438153 + MIR3 SINE MIR 139 199 -9 585 203 171 6 chr2 20818796 20818954 -232437629 + MIR SINE MIR 40 223 -39 316 270 11 0 chr2 20819025 20819114 -232437469 - MIR SINE MIR -54 208 119 1428 158 17 8 chr2 20820140 20820380 -232436203 - AluJo SINE Alu -70 242 1 3014 175 35 13 chr2 20820382 20821295 -232435288 - L1MC1 LINE L1 -507 5826 4891 1913 175 25 35 chr2 20821296 20821731 -232434852 - L1MA7 LINE L1 -201 6090 5660 2378 241 22 10 chr2 20821754 20822538 -232434045 - L1MCa LINE L1 -3163 3263 2450 249 27 0 0 chr2 20822564 20822601 -232433982 - AluJb SINE Alu -2 300 264 1460 142 0 17 chr2 20822601 20822833 -232433750 - AluJb SINE Alu -84 228 1 2360 125 142 43 chr2 20822836 20823085 -232433498 - L1MCa LINE L1 -3973 2453 2230 864 0 0 0 chr2 20823085 20823184 -232433399 - L1PA2 LINE L1 0 6155 6057 2360 125 142 43 chr2 20823184 20823492 -232433091 - L1MCa LINE L1 -4196 2230 1841 * 6210 170 24 43 chr2 20823487 20824890 -232431693 - L1MCa LINE L1 -5048 1378 3 1298 241 29 26 chr2 20824878 20825259 -232431324 - L1ME LINE L1 -471 5699 5318 * 767 142 35 30 chr2 20825259 20825428 -232431155 + L1MA8 LINE L1 6117 6286 -5 558 329 62 22 chr2 20825546 20825868 -232430715 - L2 LINE L2 -132 3181 2847 387 271 101 12 chr2 20827533 20827729 -232428854 - MIR SINE MIR -16 246 1 571 250 47 0 chr2 20828811 20828939 -232427644 - L2 LINE L2 0 3272 3139 183 279 0 49 chr2 20829248 20829309 -232427274 - L2 LINE L2 -345 2968 2911 2160 140 0 0 chr2 20829792 20830092 -232426491 - AluSx SINE Alu -10 302 3 3064 117 45 0 chr2 20830450 20830921 -232425662 + L1PA16 LINE L1 5665 6156 -10 581 272 135 66 chr2 20831572 20831642 -232424941 + HAL1 LINE L1 984 1048 -1459 1985 157 0 19 chr2 20831642 20831960 -232424623 - AluJo SINE Alu 0 312 1 581 272 135 66 chr2 20831960 20832238 -232424345 + HAL1 LINE L1 1048 1356 -1151 401 215 11 11 chr2 20832246 20832339 -232424244 - MLT1C LTR MaLR 0 467 375 828 241 64 0 chr2 20832407 20832627 -232423956 - MLT1D LTR MaLR 0 505 272 330 67 0 0 chr2 20832736 20832781 -232423802 + (CAA)n Simple_repeat Simple_repeat 2 46 0 600 272 74 6 chr2 20833396 20833558 -232423025 + L2 LINE L2 2843 3015 -298 1965 244 71 62 chr2 20833604 20833975 -232422608 + L1MC4 LINE L1 6943 7309 -733 1977 136 6 43 chr2 20833975 20834298 -232422285 + AluSx SINE Alu 1 311 -1 1965 244 71 62 chr2 20834298 20834885 -232421698 + L1MC4 LINE L1 7309 7914 -128 390 21 0 0 chr2 20834885 20834932 -232421651 + (TG)n Simple_repeat Simple_repeat 2 48 0 1965 244 71 62 chr2 20834932 20835063 -232421520 + L1MC4 LINE L1 7914 8042 0 295 219 34 164 chr2 20835093 20835331 -232421252 + L2 LINE L2 3077 3283 -30 659 295 88 68 chr2 20835339 20835794 -232420789 + HAL1 LINE L1 349 794 -1713 2324 101 0 10 chr2 20835794 20836100 -232420483 - AluSx SINE Alu -9 303 1 659 295 88 68 chr2 20836100 20836552 -232420031 + HAL1 LINE L1 794 1274 -1233 349 258 61 8 chr2 20836601 20836733 -232419850 + HAL1 LINE L1 1388 1526 -981 2039 217 30 40 chr2 20837315 20837840 -232418743 + MLT2B1 LTR ERVL 1 520 0 441 328 36 36 chr2 20838027 20838277 -232418306 + L1MEd LINE L1 811 1060 -5059 2226 208 47 55 chr2 20840117 20840712 -232415871 - MLT1E LTR MaLR -3 590 1 21 36 0 0 chr2 20841034 20841062 -232415521 + AT_rich Low_complexity Low_complexity 1 28 0 195 289 13 40 chr2 20841211 20841287 -232415296 - L2 LINE L2 -184 3088 3015 525 220 8 8 chr2 20841436 20841568 -232415015 + L1PA16 LINE L1 6030 6161 -5 408 237 178 8 chr2 20841840 20842076 -232414507 - L1ME4a LINE L1 -245 5876 5601 586 197 146 0 chr2 20843137 20843274 -232413309 - MER5A DNA MER1_type -2 187 31 252 307 43 17 chr2 20844529 20844659 -232411924 + MIR SINE MIR 21 150 -63 219 285 111 35 chr2 20844922 20845066 -232411517 + L2 LINE L2 1587 1741 -1573 1232 250 122 47 chr2 20845239 20845755 -232410828 - MLT1H1 LTR MaLR 0 555 1 377 189 95 116 chr2 20845820 20846010 -232410573 + MER112 DNA MER1_type 2 187 -73 992 248 62 30 chr2 20846045 20846384 -232410199 + MLT1I LTR MaLR 60 409 0 6449 174 66 52 chr2 20846981 20848481 -232408102 + MER52A LTR ERV1 235 1755 0 288 284 80 0 chr2 20850794 20850882 -232405701 + MIR3 SINE MIR 108 202 -6 1641 229 96 43 chr2 20852443 20853006 -232403577 + MLT1E LTR MaLR 1 593 0 452 291 79 79 chr2 20853058 20853312 -232403271 - MIR SINE MIR 0 262 9 405 366 42 0 chr2 20853878 20854020 -232402563 + L2 LINE L2 3125 3272 0 236 316 18 0 chr2 20854151 20854208 -232402375 + L2 LINE L2 3242 3299 -14 508 339 44 24 chr2 20854994 20855242 -232401341 - MIR SINE MIR -9 253 1 1080 132 33 11 chr2 20855252 20855434 -232401149 - MER5A DNA MER1_type 0 189 4 310 325 139 71 chr2 20855587 20855839 -232400744 + L2 LINE L2 2954 3222 -50 213 244 0 0 chr2 20855873 20855918 -232400665 + MIR3 SINE MIR 153 197 -11 541 256 38 37 chr2 20856797 20856972 -232399611 + MIR SINE MIR 2 178 -63 2036 121 52 0 chr2 20857342 20857632 -232398951 - AluSx SINE Alu -7 305 1 921 146 0 0 chr2 20858004 20858141 -232398442 + LTR5 LTR ERVK 1 137 -832 204 159 0 23 chr2 20858845 20858889 -232397694 + (TA)n Simple_repeat Simple_repeat 1 43 0 1470 107 5 18 chr2 20859187 20859411 -232397172 + L1PA8A LINE L1 5909 6129 -2 21 57 0 0 chr2 20859694 20859729 -232396854 + AT_rich Low_complexity Low_complexity 1 35 0 28 0 0 0 chr2 20860157 20860185 -232396398 + AT_rich Low_complexity Low_complexity 1 28 0 1071 157 51 0 chr2 20862024 20862202 -232394381 + MER5A DNA MER1_type 3 189 0 558 219 51 0 chr2 20862299 20862436 -232394147 - L1MCb LINE L1 -2343 4221 4078 337 250 10 0 chr2 20862438 20862542 -232394041 - L1MCb LINE L1 -2660 3904 3800 3819 232 104 31 chr2 20862546 20863631 -232392952 - L1MCb LINE L1 -2803 3761 2756 1800 187 0 3 chr2 20863631 20863931 -232392652 - AluJb SINE Alu -13 299 1 3819 232 104 31 chr2 20863931 20864042 -232392541 - L1MCb LINE L1 -3808 2756 2654 1781 194 0 3 chr2 20864042 20864341 -232392242 + AluJb SINE Alu 1 298 -14 3819 232 104 31 chr2 20864341 20864521 -232392062 - L1MCb LINE L1 -3910 2654 2488 2072 139 0 7 chr2 20864521 20864830 -232391753 + AluJb SINE Alu 1 307 -5 3819 232 104 31 chr2 20864830 20866125 -232390458 - L1MCb LINE L1 -4076 2488 1288 2017 116 7 3 chr2 20866125 20866410 -232390173 - AluSx SINE Alu -26 286 1 3819 232 104 31 chr2 20866410 20867202 -232389381 - L1MCb LINE L1 -5276 1288 52 2079 158 7 0 chr2 20867202 20867512 -232389071 - AluSx SINE Alu 0 312 1 3819 232 104 31 chr2 20867512 20867568 -232389015 - L1MCb LINE L1 -6512 52 1 1175 181 93 41 chr2 20869073 20869416 -232387167 + MLT1A1 LTR MaLR 5 365 0 1682 116 154 7 chr2 20869574 20869866 -232386717 + MER1B DNA MER1_type 2 336 -1 252 309 57 57 chr2 20870394 20870588 -232385995 + L2 LINE L2 2634 2827 -487 1101 205 62 4 chr2 20871117 20871361 -232385222 + MIR SINE MIR 2 259 -3 247 304 40 20 chr2 20871642 20871790 -232384793 - L1P LINE L1 -1119 5027 4877 315 288 81 0 chr2 20871868 20871979 -232384604 - L1M4 LINE L1 -1355 4791 4672 27 49 0 0 chr2 20872054 20872095 -232384488 + AT_rich Low_complexity Low_complexity 1 41 0 763 178 100 33 chr2 20872180 20872360 -232384223 - MIR SINE MIR 0 262 71 201 269 19 0 chr2 20872531 20872583 -232384000 + MIR SINE MIR 208 260 -2 930 76 0 2 chr2 20872692 20872834 -232383749 + L1PA8 LINE L1 6015 6154 -14 475 278 223 4 chr2 20873011 20873284 -232383299 - L2 LINE L2 -14 3299 2967 382 357 66 0 chr2 20873437 20873619 -232382964 - L2 LINE L2 -428 2886 2693 2093 208 20 25 chr2 20873626 20873910 -232382673 + L1M4 LINE L1 3329 3613 -2533 2372 126 5 30 chr2 20873910 20874283 -232382300 - THE1B LTR MaLR 0 364 1 2093 208 20 25 chr2 20874283 20874589 -232381994 + L1M4 LINE L1 3613 3916 -2230 257 226 0 0 chr2 20874589 20874642 -232381941 + MER69 DNA AcHobo 624 676 -550 186 43 0 0 chr2 20875599 20875622 -232380961 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 342 0 0 0 chr2 20875866 20875904 -232380679 + (CA)n Simple_repeat Simple_repeat 1 38 0 298 296 17 26 chr2 20876033 20876148 -232380435 + L2 LINE L2 301 414 -2900 234 385 70 5 chr2 20876352 20876565 -232380018 + L2 LINE L2 584 810 -2504 643 200 107 0 chr2 20876571 20876721 -232379862 - MER5A DNA MER1_type -21 168 3 670 299 147 33 chr2 20877086 20877410 -232379173 + HAL1 LINE L1 427 713 -1794 652 204 9 0 chr2 20877410 20877523 -232379060 - MER81 DNA DNA 0 114 1 670 299 147 33 chr2 20877523 20877776 -232378807 + HAL1 LINE L1 713 1070 -1437 * 1503 234 168 44 chr2 20877773 20878472 -232378111 + HAL1 LINE L1 1315 2147 -360 316 40 40 0 chr2 20878472 20878522 -232378061 + (TATAA)n Simple_repeat Simple_repeat 1 52 0 1503 234 168 44 chr2 20878522 20878701 -232377882 + HAL1 LINE L1 2147 2302 -205 810 101 0 0 chr2 20878703 20878812 -232377771 + AluSg/x SINE Alu 188 296 -16 227 175 52 103 chr2 20878820 20878861 -232377722 + HAL1 LINE L1 2306 2348 -159 1997 153 0 3 chr2 20878861 20879168 -232377415 + AluSx SINE Alu 1 306 -6 227 175 52 103 chr2 20879168 20879223 -232377360 + HAL1 LINE L1 2348 2397 -110 1474 149 20 92 chr2 20879266 20879656 -232376927 - L1MA4A LINE L1 -3 6300 5939 356 340 59 30 chr2 20880019 20880390 -232376193 + L1M4 LINE L1 4989 5370 -776 2170 115 3 16 chr2 20880534 20880848 -232375735 - AluY SINE Alu -1 310 1 349 287 108 54 chr2 20880912 20880998 -232375585 + L1ME4a LINE L1 5852 5932 -189 228 35 0 0 chr2 20880998 20881027 -232375556 + (CA)n Simple_repeat Simple_repeat 2 30 0 349 287 108 54 chr2 20881027 20881163 -232375420 + L1ME4a LINE L1 5932 6086 -35 387 60 0 0 chr2 20881849 20881899 -232374684 + (TG)n Simple_repeat Simple_repeat 1 50 0 303 222 56 78 chr2 20881900 20881990 -232374593 - L1MC4 LINE L1 -1341 6701 6614 2022 121 0 0 chr2 20882006 20882270 -232374313 - AluSx SINE Alu -48 264 1 740 193 47 18 chr2 20882700 20882871 -232373712 + LTR41 LTR ERVL 6 181 -592 1063 193 43 5 chr2 20882925 20883132 -232373451 + MER20 DNA MER1_type 1 215 -4 231 136 0 45 chr2 20883798 20883842 -232372741 + LTR41 LTR ERVL 731 772 -1 246 253 108 0 chr2 20884141 20884224 -232372359 + L1M4 LINE L1 5495 5586 -592 315 302 121 60 chr2 20884493 20884675 -232371908 - HAL1 LINE L1 -2314 193 1 26 0 0 0 chr2 20885803 20885829 -232370754 + AT_rich Low_complexity Low_complexity 1 26 0 25 31 0 0 chr2 20886592 20886624 -232369959 + AT_rich Low_complexity Low_complexity 1 32 0 3113 256 111 45 chr2 20886659 20887082 -232369501 + L1M4 LINE L1 2947 3341 -2805 183 42 0 0 chr2 20887082 20887106 -232369477 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 3113 256 111 45 chr2 20887106 20888288 -232368295 + L1M4 LINE L1 3341 4444 -1702 2296 60 20 10 chr2 20888288 20888586 -232367997 + AluY SINE Alu 1 301 -10 3113 256 111 45 chr2 20888586 20889019 -232367564 + L1M4 LINE L1 4444 5135 -1011 2050 97 7 58 chr2 20889019 20889328 -232367255 + AluSc SINE Alu 2 294 -15 3113 256 111 45 chr2 20889328 20889423 -232367160 + L1M4 LINE L1 5135 5222 -924 195 184 0 0 chr2 20889426 20889464 -232367119 + (CATATA)n Simple_repeat Simple_repeat 3 40 0 321 224 149 0 chr2 20889546 20889653 -232366930 + L1M LINE L1 5258 5380 -786 1535 237 117 28 chr2 20889906 20890503 -232366080 - MLT1G LTR MaLR 0 590 5 1846 146 48 13 chr2 20890608 20890924 -232365659 + MER1B DNA MER1_type 1 327 -12 2377 38 7 3 chr2 20890932 20891225 -232365358 - AluY SINE Alu -15 296 3 2312 77 3 3 chr2 20891395 20891694 -232364889 - AluY SINE Alu -12 299 1 811 198 21 103 chr2 20892744 20892987 -232363596 - MIR SINE MIR -20 242 20 567 281 90 31 chr2 20893246 20893907 -232362676 - L1MC4a LINE L1 -748 5398 5214 1425 163 0 4 chr2 20894361 20894588 -232361995 - AluJb SINE Alu -2 310 85 3511 235 84 19 chr2 20895010 20897276 -232359307 + L1MD2 LINE L1 1296 3718 -2822 401 202 155 8 chr2 20897390 20897519 -232359064 + L1MD2 LINE L1 4129 4276 -2264 2651 203 133 5 chr2 20897528 20898202 -232358381 + L1MD2 LINE L1 5992 6752 -1 21 36 0 0 chr2 20898203 20898231 -232358352 + AT_rich Low_complexity Low_complexity 1 28 0 13041 26 0 0 chr2 20899376 20901685 -232354898 + L1PA5 LINE L1 3838 6151 -3 24 0 0 0 chr2 20901741 20901765 -232354818 + AT_rich Low_complexity Low_complexity 1 24 0 2228 53 43 0 chr2 20902039 20902200 -232354383 - AluY SINE Alu -17 294 114 189 94 0 0 chr2 20902200 20902232 -232354351 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2228 53 43 0 chr2 20902232 20902352 -232354231 - AluY SINE Alu -197 114 1 1910 153 46 17 chr2 20903409 20903545 -232353038 - LTR23 LTR ERV1 0 467 336 2725 13 3 0 chr2 20903545 20903846 -232352737 - AluYb8 SINE Alu -3 315 14 1910 153 46 17 chr2 20903846 20904128 -232352455 - LTR23 LTR ERV1 -131 336 1 942 167 29 0 chr2 20904128 20904302 -232352281 + Tigger1 DNA MER2_type 2240 2418 0 566 189 68 74 chr2 20904307 20904497 -232352086 - MSTB2 LTR MaLR -57 400 212 1118 230 60 0 chr2 20904522 20904774 -232351809 - LTR39 LTR ERV1 0 783 517 2143 150 142 0 chr2 20904781 20905182 -232351401 + MER66B LTR ERV1 27 484 -2 2551 181 17 25 chr2 20905183 20905708 -232350875 - LTR39 LTR ERV1 -262 521 1 740 159 34 10 chr2 20905708 20905871 -232350712 - MSTB2 LTR MaLR -270 156 1 273 273 0 11 chr2 20905885 20905973 -232350610 + MLT1I LTR MaLR 323 409 0 2002 158 54 31 chr2 20906067 20906454 -232350129 - MSTC LTR MaLR 0 428 33 259 68 0 0 chr2 20906454 20906498 -232350085 + L1MA3 LINE L1 6262 6305 0 1795 186 34 44 chr2 20906538 20906974 -232349609 + MSTB1 LTR MaLR 1 432 0 308 111 0 19 chr2 20907020 20907074 -232349509 - MSTC LTR MaLR 0 428 376 718 152 0 146 chr2 20907110 20907239 -232349344 - AluJo SINE Alu -84 228 126 351 0 0 0 chr2 20907239 20907278 -232349305 + (CA)n Simple_repeat Simple_repeat 2 40 0 718 152 0 146 chr2 20907278 20907312 -232349271 - AluJo SINE Alu -186 126 89 566 132 0 115 chr2 20907331 20907370 -232349213 - MSTC LTR MaLR -36 392 350 2091 82 21 14 chr2 20907370 20907681 -232348902 + AluY SINE Alu 1 313 0 566 132 0 115 chr2 20907681 20907867 -232348716 - MSTC LTR MaLR -78 350 89 197 300 186 7 chr2 20908092 20908232 -232348351 - L2 LINE L2 -6 3307 3143 1136 217 112 42 chr2 20908277 20908798 -232347785 - MLT1F1 LTR MaLR 0 567 1 1399 212 10 10 chr2 20909090 20909382 -232347201 - AluJb SINE Alu -18 294 3 779 147 7 7 chr2 20909383 20909519 -232347064 - AluJb SINE Alu -176 136 1 1783 135 87 34 chr2 20909729 20909915 -232346668 + THE1C LTR MaLR 1 176 -199 243 0 0 0 chr2 20909915 20909942 -232346641 + (TC)n Simple_repeat Simple_repeat 1 27 0 1783 135 87 34 chr2 20909942 20910111 -232346472 + THE1C LTR MaLR 176 375 0 1550 191 62 0 chr2 20910311 20910584 -232345999 - AluJo SINE Alu -22 290 1 306 243 45 9 chr2 20910925 20911036 -232345547 + MLT1K LTR MaLR 466 580 -8 22 35 0 0 chr2 20912494 20912523 -232344060 + AT_rich Low_complexity Low_complexity 1 29 0 232 222 19 0 chr2 20912812 20912866 -232343717 + (TA)n Simple_repeat Simple_repeat 2 56 0 1136 197 13 21 chr2 20913328 20913562 -232343021 + MLT1D LTR MaLR 1 232 -273 774 182 28 93 chr2 20913567 20913781 -232342802 + MLT1D LTR MaLR 206 405 -100 1099 94 0 0 chr2 20913784 20913944 -232342639 + AluY SINE Alu 145 304 -7 556 139 9 37 chr2 20913945 20914053 -232342530 + MLT1D LTR MaLR 399 503 -2 23 68 0 0 chr2 20914355 20914399 -232342184 + AT_rich Low_complexity Low_complexity 1 44 0 961 139 12 0 chr2 20914457 20914630 -232341953 + C-rich Low_complexity Low_complexity 4 178 0 255 61 0 0 chr2 20914630 20914663 -232341920 + (TTCC)n Simple_repeat Simple_repeat 3 35 0 520 199 42 12 chr2 20915490 20915656 -232340927 - L1MC5 LINE L1 -176 7785 7615 1397 203 75 7 chr2 20916145 20916426 -232340157 - AluJo SINE Alu -9 303 4 408 267 112 43 chr2 20916906 20917093 -232339490 - L1 LINE L1 -2368 3778 3579 2118 107 28 14 chr2 20917324 20917613 -232338970 - AluSc SINE Alu -16 293 1 745 272 18 9 chr2 20918101 20918318 -232338265 + MLT1I LTR MaLR 174 392 -17 24 53 0 0 chr2 20918494 20918532 -232338051 + AT_rich Low_complexity Low_complexity 1 38 0 3255 186 17 0 chr2 20918829 20919491 -232337092 + L1PB4 LINE L1 5482 6154 -2 296 109 0 0 chr2 20919514 20919560 -232337023 + L1MA3 LINE L1 5395 5440 -865 5655 106 8 17 chr2 20919595 20920479 -232336104 + L1MA3 LINE L1 5428 6303 -2 31 26 0 0 chr2 20920487 20920525 -232336058 + AT_rich Low_complexity Low_complexity 1 38 0 282 56 0 0 chr2 20921749 20921785 -232334798 + (TG)n Simple_repeat Simple_repeat 2 37 0 257 346 37 22 chr2 20921976 20922112 -232334471 + L2 LINE L2 2709 2846 -468 645 268 94 75 chr2 20922362 20922839 -232333744 + MLT1J LTR MaLR 26 511 0 1706 181 0 30 chr2 20922880 20923179 -232333404 - AluJb SINE Alu -18 294 5 338 132 0 19 chr2 20923928 20923981 -232332602 - MIR3 SINE MIR -30 178 127 24 0 0 0 chr2 20924047 20924071 -232332512 + AT_rich Low_complexity Low_complexity 1 24 0 227 231 77 0 chr2 20925181 20925246 -232331337 + LTR37A LTR ERV1 149 218 -208 1743 148 0 0 chr2 20926144 20926394 -232330189 + AluSq SINE Alu 1 250 -63 185 236 9 132 chr2 20926555 20926661 -232329922 - MIR SINE MIR -70 192 100 1665 186 30 19 chr2 20927931 20928296 -232328287 + MLT2D LTR ERVL 1 369 -45 1864 202 3 0 chr2 20928297 20928659 -232327924 + MER47A DNA MER2_type 2 364 -2 255 109 73 36 chr2 20928697 20928752 -232327831 + MLT2D LTR ERVL 464 520 0 1624 278 48 33 chr2 20928767 20929208 -232327375 - MLT1G1 LTR MaLR -2 593 160 2278 101 3 0 chr2 20929208 20929505 -232327078 - AluSx SINE Alu -14 298 1 1624 278 48 33 chr2 20929505 20929536 -232327047 - MLT1G1 LTR MaLR -435 160 131 497 205 180 12 chr2 20929536 20929697 -232326886 - MER53 DNA DNA 0 189 2 1624 278 48 33 chr2 20929697 20929803 -232326780 - MLT1G1 LTR MaLR -464 131 5 325 264 50 99 chr2 20929982 20930164 -232326419 - MLT1G1-int LTR MaLR -171 1200 1028 1515 150 124 4 chr2 20930597 20930863 -232325720 + AluJb SINE Alu 1 298 -14 1118 208 64 0 chr2 20930863 20931113 -232325470 + MER58B DNA MER1_type 76 341 0 769 220 55 48 chr2 20931673 20931977 -232324606 - MLT1C LTR MaLR -12 441 151 381 167 14 0 chr2 20931977 20932049 -232324534 + AluS SINE Alu 1 73 -230 788 157 15 82 chr2 20932168 20932436 -232324147 + L1MB8 LINE L1 5909 6158 -20 1901 162 0 3 chr2 20932436 20932745 -232323838 - AluSx SINE Alu -4 308 1 398 158 24 25 chr2 20932822 20932915 -232323668 - L1MB7 LINE L1 -122 6058 5959 * 5407 224 60 27 chr2 20932903 20934785 -232321798 - L1M4 LINE L1 -961 5421 3479 1584 221 71 30 chr2 20934785 20935387 -232321196 - L1M4 LINE L1 -3180 3202 2576 1387 215 6 0 chr2 20935460 20935795 -232320788 - L1 LINE L1 -1545 4601 4265 4695 157 56 10 chr2 20935796 20937139 -232319444 + L1PA16 LINE L1 4718 6156 -10 674 230 81 90 chr2 20937160 20937461 -232319122 - L1M4 LINE L1 -3910 2474 2179 1969 119 36 4 chr2 20937461 20937739 -232318844 - AluSx SINE Alu 0 312 26 674 230 81 90 chr2 20937739 20937994 -232318589 - L1M4 LINE L1 -4205 2179 1923 360 96 0 0 chr2 20938128 20938180 -232318403 + AluSg/x SINE Alu 215 266 -34 * 531 183 58 67 chr2 20938179 20938370 -232318213 - MLT1C LTR MaLR -300 205 7 649 272 55 1 chr2 20938388 20938622 -232317961 + MLT1G LTR MaLR 10 265 -290 688 216 115 32 chr2 20938730 20939008 -232317575 + MER33 DNA MER1_type 23 323 -1 255 284 0 0 chr2 20939280 20939353 -232317230 + MIR SINE MIR 47 119 -89 32 91 0 0 chr2 20939495 20939583 -232317000 + AT_rich Low_complexity Low_complexity 1 88 0 288 186 0 0 chr2 20939657 20939716 -232316867 + (TG)n Simple_repeat Simple_repeat 2 60 0 873 195 78 10 chr2 20941067 20941272 -232315311 + MER20 DNA MER1_type 1 219 0 618 210 0 29 chr2 20941288 20941426 -232315157 - FLAM_A SINE Alu -8 134 1 352 304 204 4 chr2 20944538 20944798 -232311785 - L2 LINE L2 -852 2462 2151 285 136 17 68 chr2 20944866 20944925 -232311658 + L2 LINE L2 3217 3272 0 220 349 113 33 chr2 20945590 20945802 -232310781 - L2 LINE L2 -191 3081 2853 21 57 0 0 chr2 20946040 20946075 -232310508 + AT_rich Low_complexity Low_complexity 1 35 0 263 361 23 15 chr2 20946164 20946294 -232310289 + MIR SINE MIR 19 149 -59 23 54 0 0 chr2 20948288 20948325 -232308258 + AT_rich Low_complexity Low_complexity 1 37 0 395 190 64 2 chr2 20948325 20948442 -232308141 - L1MA9 LINE L1 -7 6290 6166 2011 234 55 22 chr2 20948686 20949324 -232307259 + L1MC4 LINE L1 5254 5912 -1896 229 197 0 42 chr2 20949368 20949439 -232307144 + L1MC4 LINE L1 5894 5961 -1847 6098 156 23 6 chr2 20949577 20951467 -232305116 + L1PA15 LINE L1 4022 5945 -220 3046 267 82 18 chr2 20951593 20952976 -232303607 + L1MC4 LINE L1 6461 7931 -111 1678 182 54 99 chr2 20953018 20953146 -232303437 + MLT1C LTR MaLR 6 138 -329 1783 150 22 32 chr2 20953146 20953459 -232303124 - AluJb SINE Alu -2 310 1 1678 182 54 99 chr2 20953459 20953814 -232302769 + MLT1C LTR MaLR 138 467 0 295 135 14 94 chr2 20953829 20953924 -232302659 + L1MC4 LINE L1 7905 8041 -1 1035 129 20 0 chr2 20954000 20954147 -232302436 - AluSg SINE Alu -160 150 1 358 263 25 0 chr2 20954150 20954230 -232302353 - MER58B DNA MER1_type -259 82 1 411 186 17 8 chr2 20954759 20954877 -232301706 + (TA)n Simple_repeat Simple_repeat 1 119 0 4306 188 14 8 chr2 20954894 20955933 -232300650 - L1MB4 LINE L1 -18 6162 5111 333 0 0 0 chr2 20956646 20956683 -232299900 + (TG)n Simple_repeat Simple_repeat 1 37 0 365 256 194 8 chr2 20957483 20957612 -232298971 - MER5A DNA MER1_type -7 182 30 676 103 0 0 chr2 20957826 20957923 -232298660 + L1P LINE L1 2 98 -6048 * 1063 83 0 0 chr2 20957921 20958066 -232298517 + L1P LINE L1 623 767 -5379 * 28483 49 3 1 chr2 20958062 20961758 -232294825 - L1P LINE L1 -2442 3704 4 21 89 0 0 chr2 20961795 20961851 -232294732 + AT_rich Low_complexity Low_complexity 1 56 0 1964 144 3 31 chr2 20964226 20964650 -232291933 + L1MA1 LINE L1 5933 6345 0 314 243 10 29 chr2 20964869 20964963 -232291620 - MLT1I LTR MaLR 0 409 318 5879 168 217 26 chr2 20964963 20966408 -232290175 - MER52A LTR ERV1 0 1755 36 193 262 98 16 chr2 20967058 20967119 -232289464 + MIR SINE MIR 3 68 -194 2088 168 14 11 chr2 20967291 20967655 -232288928 + MLT1A1 LTR MaLR 1 365 0 219 297 16 0 chr2 20968602 20968666 -232287917 + (TAA)n Simple_repeat Simple_repeat 2 66 0 611 129 9 35 chr2 20969614 20969730 -232286853 - L1MB3 LINE L1 -10 6173 6061 303 357 119 16 chr2 20969736 20970055 -232286528 + L2 LINE L2 1837 2188 -1126 1825 129 63 33 chr2 20970553 20970607 -232285976 + THE1C LTR MaLR 1 52 -323 2095 117 63 26 chr2 20970607 20970958 -232285625 + THE1B LTR MaLR 1 364 0 1825 129 63 33 chr2 20970958 20971267 -232285316 + THE1C LTR MaLR 52 375 0 409 361 164 19 chr2 20971705 20971974 -232284609 + L2 LINE L2 2961 3268 -4 498 33 0 0 chr2 20972085 20972145 -232284438 + (TG)n Simple_repeat Simple_repeat 1 60 0 2474 143 30 7 chr2 20973141 20973569 -232283014 - L1PA16 LINE L1 0 6166 5729 2250 217 23 0 chr2 20973576 20974138 -232282445 + L1P LINE L1 4662 5236 -910 606 263 29 34 chr2 20974193 20974368 -232282215 + L2 LINE L2 2581 2754 -560 274 233 67 0 chr2 20974360 20974420 -232282163 - L2 LINE L2 0 3313 3250 * 245 314 41 8 chr2 20974507 20974628 -232281955 - L2 LINE L2 -276 3037 2913 476 157 231 0 chr2 20974630 20974751 -232281832 - L1MB7 LINE L1 -16 6168 6020 1419 144 0 26 chr2 20974751 20974872 -232281711 + L1MB8 LINE L1 5708 5831 -347 2442 34 41 0 chr2 20974872 20975165 -232281418 + AluY SINE Alu 1 305 -6 1419 144 0 26 chr2 20975165 20975307 -232281276 + L1MB8 LINE L1 5831 5964 -214 217 237 122 46 chr2 21178692 21178823 -232077760 - MIR3 SINE MIR -52 156 16 317 182 0 0 chr2 21178959 21179014 -232077569 + MER112 DNA MER1_type 10 64 -196 325 263 40 20 chr2 21180504 21180603 -232075980 + MLT1D LTR MaLR 237 337 -168 246 344 25 38 chr2 21181305 21181462 -232075121 + MIR3 SINE MIR 54 208 0 2070 122 0 0 chr2 21181789 21182084 -232074499 + AluSx SINE Alu 1 295 -17 1484 259 7 46 chr2 21183117 21183577 -232073006 + L2 LINE L2 2219 2660 -654 1121 167 5 56 chr2 21183583 21183799 -232072784 + MER20 DNA MER1_type 1 205 -14 1348 143 17 22 chr2 21183843 21184098 -232072485 - AluJo SINE Alu 0 312 68 557 331 68 24 chr2 21184098 21184608 -232071975 + L2 LINE L2 2699 3230 -83 199 297 38 15 chr2 21185559 21185609 -232070974 + MIR SINE MIR 40 87 -121 2745 13 0 0 chr2 21185609 21185920 -232070663 + AluYa5 SINE Alu 1 311 0 199 297 38 15 chr2 21185920 21185969 -232070614 + MIR SINE MIR 87 142 -66 661 268 25 0 chr2 21186861 21187018 -232069565 + MIR SINE MIR 42 202 -60 1972 149 3 0 chr2 21188422 21188731 -232067852 + AluSx SINE Alu 1 310 -2 1246 243 168 29 chr2 21188977 21189388 -232067195 - MLT1H LTR MaLR -45 504 1 191 200 31 108 chr2 21190174 21190239 -232066344 - L2 LINE L2 -1864 1450 1391 242 397 71 8 chr2 21190879 21191005 -232065578 - L2 LINE L2 -51 3221 3088 9291 33 0 0 chr2 21192823 21193908 -232062675 - L1P LINE L1 -1035 5111 4026 3377 34 5 5 chr2 21193908 21194316 -232062267 + L1PA5 LINE L1 5746 6153 -1 792 210 132 0 chr2 21194379 21194546 -232062037 + MER20 DNA MER1_type 1 189 -30 180 194 75 75 chr2 21195392 21195459 -232061124 + L2 LINE L2 3193 3259 -54 530 109 11 0 chr2 21195489 21195581 -232061002 + (TGGA)n Simple_repeat Simple_repeat 1 93 0 689 280 45 15 chr2 21197970 21198170 -232058413 + MIR SINE MIR 6 211 -51 2176 84 7 0 chr2 21198462 21198759 -232057824 + AluY SINE Alu 1 299 -12 203 121 121 24 chr2 21199476 21199559 -232057024 + (TGAA)n Simple_repeat Simple_repeat 3 93 0 183 42 0 0 chr2 21199900 21199924 -232056659 + (A)n Simple_repeat Simple_repeat 1 24 0 386 331 6 12 chr2 21200654 21200823 -232055760 + (TATG)n Simple_repeat Simple_repeat 2 169 0 294 247 260 20 chr2 21201271 21201417 -232055166 + MIR SINE MIR 75 255 -7 309 293 60 26 chr2 21201463 21201579 -232055004 + MIR SINE MIR 29 148 -114 193 281 61 49 chr2 21201717 21201799 -232054784 - MIR3 SINE MIR -19 189 107 705 279 42 9 chr2 21202380 21202595 -232053988 - MIR SINE MIR -21 241 20 362 227 0 0 chr2 21206285 21206360 -232050223 - L2 LINE L2 0 3272 3198 390 244 110 31 chr2 21206396 21206523 -232050060 - MIR3 SINE MIR -66 142 6 188 184 26 0 chr2 21206758 21206796 -232049787 - L2 LINE L2 -227 3045 3007 510 244 39 8 chr2 21208362 21208489 -232048094 - MIR SINE MIR -116 146 16 279 353 0 0 chr2 21208586 21208671 -232047912 + L2 LINE L2 3227 3311 -2 2123 110 3 3 chr2 21209056 21209365 -232047218 + AluSc SINE Alu 1 309 0 200 308 0 19 chr2 21209558 21209610 -232046973 - MIR SINE MIR -54 208 158 257 357 20 10 chr2 21209657 21209755 -232046828 - MIR SINE MIR -110 152 54 2340 113 132 5 chr2 21211747 21212126 -232044457 + MSTA LTR MaLR 2 428 0 233 278 56 44 chr2 21212587 21212677 -232043906 + L2 LINE L2 3173 3263 -9 352 358 12 24 chr2 21212788 21212953 -232043630 - MIR SINE MIR -57 205 43 279 203 0 0 chr2 21213395 21213454 -232043129 + (TCCA)n Simple_repeat Simple_repeat 4 62 0 166 63 0 0 chr2 21214424 21214723 -232041860 + AT_rich Low_complexity Low_complexity 1 299 0 278 205 29 29 chr2 21214730 21214901 -232041682 + (TTATA)n Simple_repeat Simple_repeat 1 171 0 49 0 0 0 chr2 21214901 21214950 -232041633 + AT_rich Low_complexity Low_complexity 1 49 0 185 178 22 0 chr2 21217325 21217370 -232039213 + GA-rich Low_complexity Low_complexity 3 48 0 212 321 152 49 chr2 21226506 21226730 -232029853 + L2 LINE L2 3021 3267 -5 620 278 45 20 chr2 21229465 21229663 -232026920 + MIR SINE MIR 52 254 -8 2388 99 0 0 chr2 21229709 21230002 -232026581 + AluSc SINE Alu 1 293 -16 2364 74 0 0 chr2 21230404 21230747 -232025836 + AluY SINE Alu 1 343 0 1017 286 97 3 chr2 21230943 21231303 -232025280 - L2 LINE L2 -30 3283 2890 1816 253 98 31 chr2 21231670 21232550 -232024033 + L2 LINE L2 2346 3293 -20 201 237 17 34 chr2 21232550 21232609 -232023974 + L2 LINE L2 3248 3305 -8 243 213 245 0 chr2 21233811 21233905 -232022678 - MIR SINE MIR -48 214 98 249 296 134 20 chr2 21234033 21234280 -232022303 + L2 LINE L2 1713 1987 -1327 649 328 131 25 chr2 21234547 21235628 -232020955 + L2 LINE L2 2014 3199 -73 1753 162 0 39 chr2 21235661 21235970 -232020613 - AluJo SINE Alu -15 297 1 25 31 0 0 chr2 21237828 21237860 -232018723 + AT_rich Low_complexity Low_complexity 1 32 0 1858 133 36 23 chr2 21238038 21238346 -232018237 + AluSx SINE Alu 1 312 0 270 236 236 9 chr2 21239441 21239547 -232017036 - MER5A DNA MER1_type -5 184 55 316 322 49 44 chr2 21239767 21239955 -232016628 - MIR SINE MIR -37 225 34 2191 122 0 7 chr2 21239955 21240250 -232016333 - AluSg SINE Alu -17 293 1 316 322 49 44 chr2 21240250 21240266 -232016317 - MIR SINE MIR -228 34 20 209 367 111 6 chr2 21240771 21240951 -232015632 - MIR SINE MIR -27 235 37 2511 62 0 7 chr2 21241009 21241315 -232015268 - AluY SINE Alu -7 304 1 2154 143 0 6 chr2 21242870 21243184 -232013399 + AluSx SINE Alu 1 312 0 281 87 0 22 chr2 21243184 21243230 -232013353 + (GGAA)n Simple_repeat Simple_repeat 4 48 0 5032 167 10 9 chr2 21243783 21245312 -232011271 + L1PB4 LINE L1 4624 6156 0 1402 154 9 4 chr2 21245349 21245576 -232011007 + AluJb SINE Alu 85 312 0 273 271 58 58 chr2 21245636 21245824 -232010759 + L1MC4 LINE L1 7828 8015 -27 183 310 35 11 chr2 21246336 21246423 -232010160 + L2 LINE L2 2936 3024 -248 186 214 48 107 chr2 21247953 21248037 -232008546 + MIR SINE MIR 103 181 -81 2248 120 3 0 chr2 21252031 21252340 -232004243 - AluSx SINE Alu -2 310 1 587 295 77 49 chr2 21252526 21253105 -232003478 - L1ME4a LINE L1 -188 5933 5334 965 107 0 20 chr2 21253244 21253393 -232003190 + L1MA5A LINE L1 6150 6295 -2 2306 119 25 19 chr2 21253650 21254012 -232002571 + THE1B LTR MaLR 1 364 0 764 192 148 6 chr2 21255285 21255467 -232001116 + MER3 DNA MER1_type 1 208 -1 217 87 22 22 chr2 21257584 21257630 -231998953 + (CAG)n Simple_repeat Simple_repeat 1 46 0 2091 105 0 7 chr2 21259652 21259928 -231996655 - AluSg SINE Alu -8 302 29 270 0 0 0 chr2 21261011 21261041 -231995542 + (CA)n Simple_repeat Simple_repeat 1 30 0 289 270 43 0 chr2 21261823 21261938 -231994645 + MIR3 SINE MIR 85 204 -4 209 305 49 24 chr2 21262973 21263055 -231993528 - MIR3 SINE MIR -21 187 104 225 0 0 0 chr2 21263057 21263082 -231993501 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2242 117 0 7 chr2 21263205 21263512 -231993071 + AluSx SINE Alu 1 305 -7 2466 111 11 24 chr2 21263537 21263917 -231992666 - THE1C LTR MaLR 0 375 1 208 238 38 50 chr2 21264009 21264089 -231992494 - L3 LINE CR1 -1 1576 1498 4369 178 26 16 chr2 21264689 21265768 -231990815 - L1MB8 LINE L1 -104 6074 4975 277 377 9 0 chr2 21266867 21266981 -231989602 - MIR SINE MIR -124 138 24 341 141 14 0 chr2 21268008 21268079 -231988504 + CT-rich Low_complexity Low_complexity 1 72 0 732 167 0 0 chr2 21268252 21268366 -231988217 - MLT1B LTR MaLR -17 373 260 2107 111 18 0 chr2 21268393 21268707 -231987876 - AluSq SINE Alu 0 319 1 2034 110 48 6 chr2 21268864 21269200 -231987383 - L1MA5A LINE L1 -4 6293 5944 1465 161 17 0 chr2 21269201 21269435 -231987148 - MLT1B LTR MaLR -118 272 35 1497 177 123 24 chr2 21269435 21269774 -231986809 - MLT1A2 LTR MaLR 0 374 1 1071 232 25 4 chr2 21270656 21270936 -231985647 - L1M4 LINE L1 -3333 2813 2528 2131 109 39 0 chr2 21271176 21271461 -231985122 - AluSp SINE Alu -17 296 1 831 251 54 17 chr2 21271708 21271947 -231984636 + MIR SINE MIR 14 261 -1 2433 180 20 9 chr2 21273606 21274062 -231982521 + MER65C LTR ERV1 1 461 0 619 268 51 47 chr2 21274086 21274340 -231982243 + MIR SINE MIR 4 258 -4 394 157 0 36 chr2 21274519 21274602 -231981981 - MER116 DNA Mariner 0 80 1 1126 170 78 92 chr2 21275159 21275469 -231981114 + AluJb SINE Alu 6 311 0 960 133 0 0 chr2 21275725 21275905 -231980678 + (CATCT)n Simple_repeat Simple_repeat 1 180 0 721 247 32 65 chr2 21276869 21277116 -231979467 + MIR SINE MIR 24 262 0 212 182 36 36 chr2 21277126 21277181 -231979402 + MIR SINE MIR 168 222 -40 1055 307 98 50 chr2 21277262 21278116 -231978467 + L2 LINE L2 1735 2629 -685 2610 188 35 16 chr2 21278989 21279538 -231977045 + L1MB1 LINE L1 5608 6166 -2 420 20 0 0 chr2 21281390 21281439 -231975144 + (T)n Simple_repeat Simple_repeat 1 49 0 703 259 41 25 chr2 21282364 21282607 -231973976 + MER112 DNA MER1_type 8 254 -6 2214 60 0 3 chr2 21283067 21283351 -231973232 - L1PA6 LINE L1 -7 6147 5865 542 245 216 5 chr2 21284772 21284976 -231971607 + MIR SINE MIR 16 262 0 339 294 231 6 chr2 21285065 21285225 -231971358 - MIR3 SINE MIR -7 201 6 195 42 0 0 chr2 21285344 21285368 -231971215 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 58 15 0 0 chr2 21285504 21285569 -231971014 + AT_rich Low_complexity Low_complexity 1 65 0 211 278 56 67 chr2 21285740 21285830 -231970753 - L2 LINE L2 -188 3084 2996 1939 144 6 72 chr2 21286104 21286465 -231970118 - MER1B DNA MER1_type 0 337 1 1860 198 39 8 chr2 21286700 21287318 -231969265 - L1M4 LINE L1 -596 5582 4945 1976 159 65 15 chr2 21287321 21287723 -231968860 - L1MC3 LINE L1 -6 7779 7358 3599 232 147 28 chr2 21287744 21287958 -231968625 - L1M4 LINE L1 -903 5243 5056 2072 138 3 0 chr2 21287958 21288256 -231968327 - AluSx SINE Alu -13 299 1 3599 232 147 28 chr2 21288256 21289447 -231967136 - L1M4 LINE L1 -1090 5056 3671 2571 246 31 12 chr2 21289443 21290123 -231966460 - L1MCb LINE L1 -5349 696 4 * 2666 216 53 3 chr2 21290136 21290783 -231965800 - L1M4 LINE L1 -1182 4964 4286 1642 176 26 57 chr2 21292085 21292471 -231964112 + MLT1A2 LTR MaLR 1 374 0 524 146 10 68 chr2 21292472 21292575 -231964008 + MLT1A2-int LTR MaLR 2 98 -1273 680 190 26 0 chr2 21292599 21292715 -231963868 - AluJo SINE Alu -178 134 16 4545 53 16 0 chr2 21292741 21293311 -231963272 - L1PA7 LINE L1 -7 6147 5569 6145 74 6 0 chr2 21293311 21294312 -231962271 + L1PA7 LINE L1 4553 5557 -597 247 88 0 0 chr2 21294309 21294343 -231962240 + MLT1A2-int LTR MaLR 82 115 -1620 * 2145 206 63 2 chr2 21294334 21294780 -231961803 + MLT1A2-int LTR MaLR 260 732 -639 2109 212 45 25 chr2 21295107 21295578 -231961005 + MLT1A2-int LTR MaLR 1256 1735 0 1131 207 61 105 chr2 21295578 21295969 -231960614 + MLT1A2 LTR MaLR 1 374 0 320 244 217 0 chr2 21295975 21296090 -231960493 - MIR SINE MIR -10 252 113 375 306 129 43 chr2 21296640 21296895 -231959688 - L1M4 LINE L1 -1082 5064 4788 402 343 18 11 chr2 21296918 21297094 -231959489 + MIR SINE MIR 6 179 -29 254 289 145 0 chr2 21297673 21297756 -231958827 - MIR SINE MIR -148 114 20 820 71 0 0 chr2 21297901 21298033 -231958550 + AluSp/q SINE Alu 188 319 0 735 309 134 31 chr2 21299313 21299896 -231956687 - L1MDa LINE L1 -3192 3348 2706 189 0 0 0 chr2 21300027 21300048 -231956535 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 620 112 0 0 chr2 21300050 21300139 -231956444 - AluSg/x SINE Alu -29 283 195 330 274 74 51 chr2 21300158 21300333 -231956250 - L1MDa LINE L1 -4012 2528 2350 2474 71 0 3 chr2 21300685 21300996 -231955587 + AluY SINE Alu 1 310 -1 361 298 30 34 chr2 21301014 21301249 -231955334 - HAL1 LINE L1 -849 1658 1425 563 288 82 88 chr2 21301255 21301880 -231954703 - HAL1 LINE L1 -1060 1447 827 394 347 72 7 chr2 21302478 21302755 -231953828 - L1M4 LINE L1 -846 5300 5006 456 266 101 14 chr2 21303107 21303293 -231953290 + MLT1J2 LTR MaLR 1 198 -248 2509 55 0 0 chr2 21303462 21303769 -231952814 - AluY SINE Alu -4 307 1 584 288 268 40 chr2 21303771 21304626 -231951957 - L1M4 LINE L1 -2137 4009 2960 585 283 33 11 chr2 21305664 21305848 -231950735 + MIR SINE MIR 74 261 -1 346 273 148 22 chr2 21305944 21306127 -231950456 - MIR SINE MIR -50 212 7 180 97 0 0 chr2 21306610 21306641 -231949942 + (TTTTTG)n Simple_repeat Simple_repeat 6 36 0 3252 149 107 5 chr2 21306909 21307266 -231949317 - L1MB3 LINE L1 -7 6176 5857 264 100 0 0 chr2 21307266 21307306 -231949277 + (TG)n Simple_repeat Simple_repeat 1 40 0 3252 149 107 5 chr2 21307306 21307574 -231949009 - L1MB3 LINE L1 -326 5857 5487 324 345 21 27 chr2 21307658 21307824 -231948759 - MIR SINE MIR -53 209 42 262 299 75 27 chr2 21307934 21308081 -231948502 + L3b LINE CR1 1284 1437 -146 2290 84 0 29 chr2 21308537 21308847 -231947736 - AluSg SINE Alu -4 306 6 364 144 41 41 chr2 21309700 21309797 -231946786 - MIR3 SINE MIR 0 208 112 36 53 0 0 chr2 21310673 21310730 -231945853 + AT_rich Low_complexity Low_complexity 1 57 0 232 259 12 157 chr2 21312291 21312457 -231944126 - L2 LINE L2 -92 3180 3039 2983 159 30 14 chr2 21313617 21314189 -231942394 - L1MB8 LINE L1 0 6178 5598 576 222 44 116 chr2 21314540 21314652 -231941931 - MER3 DNA MER1_type 0 209 119 1618 187 13 32 chr2 21314652 21314968 -231941615 - AluJo SINE Alu -1 311 2 576 222 44 116 chr2 21314968 21315080 -231941503 - MER3 DNA MER1_type -90 119 1 357 205 26 13 chr2 21315096 21315174 -231941409 + MER20 DNA MER1_type 1 79 -140 2392 102 29 37 chr2 21315178 21315787 -231940796 - LTR12 LTR ERV1 0 714 348 1897 73 16 0 chr2 21315760 21316005 -231940578 - HERV9 LTR ERV1 -279 8120 7872 * 439 189 102 39 chr2 21316008 21316113 -231940470 + MER20 DNA MER1_type 84 200 -19 2265 215 118 35 chr2 21316113 21316876 -231939707 - LTR1B LTR ERV1 0 826 1 439 189 102 39 chr2 21316876 21316897 -231939686 + MER20 DNA MER1_type 200 218 -1 416 319 35 0 chr2 21316950 21317094 -231939489 - MER5B DNA MER1_type -29 149 1 403 207 129 26 chr2 21317855 21317971 -231938612 - L2 LINE L2 -3 3310 3183 211 147 0 0 chr2 21317981 21318015 -231938568 - L2 LINE L2 -15 3298 3265 235 225 82 16 chr2 21319036 21319218 -231937365 - L1M4 LINE L1 -2828 3318 3125 1732 206 5 29 chr2 21319223 21319607 -231936976 - L1ME1 LINE L1 -4 6231 5857 262 254 82 9 chr2 21319616 21319726 -231936857 - L1ME1 LINE L1 -1330 4885 4768 2079 104 13 7 chr2 21319743 21320042 -231936541 + AluSg SINE Alu 1 301 -9 3801 231 58 100 chr2 21320048 21320250 -231936333 - L1ME1 LINE L1 -1536 4679 4470 1905 136 35 0 chr2 21320250 21320536 -231936047 - AluSx SINE Alu -16 296 1 3801 231 58 100 chr2 21320536 21321634 -231934949 - L1ME1 LINE L1 -1745 4470 3328 2131 65 61 0 chr2 21321634 21321912 -231934671 - AluY SINE Alu -14 297 3 3801 231 58 100 chr2 21321912 21324195 -231932388 - L1ME1 LINE L1 -2887 3328 1275 1944 277 62 9 chr2 21324197 21325295 -231931288 - L1ME1 LINE L1 -5170 1226 35 470 260 91 69 chr2 21325303 21325765 -231930818 - L1M4 LINE L1 -3024 3122 2651 2018 128 11 0 chr2 21325845 21326153 -231930430 - AluSq SINE Alu 0 311 1 344 304 76 67 chr2 21326309 21326667 -231929916 - MLT1H LTR MaLR -34 375 47 22 0 0 0 chr2 21326723 21326745 -231929838 + AT_rich Low_complexity Low_complexity 1 22 0 545 264 51 76 chr2 21326761 21327037 -231929546 - L2 LINE L2 0 3313 3045 1126 253 50 13 chr2 21327126 21327427 -231929156 + MLT1H LTR MaLR 1 312 -237 273 235 0 15 chr2 21327993 21328061 -231928522 + HsTC2 DNA Tc2 14 80 -1818 327 366 143 7 chr2 21328136 21328409 -231928174 + L2 LINE L2 2963 3272 0 941 295 84 14 chr2 21328449 21328879 -231927704 - LTR40c LTR ERVL -5 460 1 2278 69 0 4 chr2 21329072 21329349 -231927234 - AluSc SINE Alu -19 290 15 2117 121 3 3 chr2 21330467 21330772 -231925811 + AluSq SINE Alu 1 305 -8 1564 136 19 87 chr2 21330993 21331303 -231925280 + AluJo SINE Alu 6 294 -18 333 0 0 0 chr2 21331444 21331481 -231925102 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 356 285 131 83 chr2 21331742 21332079 -231924504 - L1ME4a LINE L1 -289 5832 5480 532 226 166 42 chr2 21333176 21333393 -231923190 - Charlie2a DNA MER1_type -916 1946 1703 293 159 0 44 chr2 21333397 21333475 -231923108 - L1ME3A LINE L1 0 6162 6092 219 36 0 0 chr2 21333477 21333505 -231923078 + (TTG)n Simple_repeat Simple_repeat 3 30 0 622 283 25 89 chr2 21333558 21333670 -231922913 - Charlie2a DNA MER1_type -2444 338 220 2336 104 0 0 chr2 21333670 21333968 -231922615 - AluSx SINE Alu -14 298 1 622 283 25 89 chr2 21333968 21334215 -231922368 - Charlie2a DNA MER1_type -2562 220 2 257 300 0 0 chr2 21334227 21334287 -231922296 - L2 LINE L2 -224 3048 2989 1756 194 10 25 chr2 21334378 21334775 -231921808 - L1MA4 LINE L1 -935 5211 4821 * 1931 141 8 27 chr2 21334769 21335173 -231921410 + L1MA4 LINE L1 5215 5612 -688 566 167 0 0 chr2 21335173 21335280 -231921303 + L1MA4 LINE L1 6188 6295 -5 807 263 109 42 chr2 21335723 21336605 -231919978 + L1M4 LINE L1 2201 3141 -3005 285 158 0 0 chr2 21336927 21336997 -231919586 - L1MC4 LINE L1 0 8040 7927 565 256 23 6 chr2 21337009 21337181 -231919402 - L1MC4 LINE L1 -154 7888 7714 189 0 0 0 chr2 21338180 21338201 -231918382 + (TG)n Simple_repeat Simple_repeat 1 21 0 204 40 0 0 chr2 21338437 21338462 -231918121 + (TG)n Simple_repeat Simple_repeat 1 25 0 207 0 0 0 chr2 21338521 21338544 -231918039 + (TG)n Simple_repeat Simple_repeat 1 23 0 210 37 0 0 chr2 21339133 21339160 -231917423 + (TG)n Simple_repeat Simple_repeat 1 27 0 21 57 0 0 chr2 21339618 21339653 -231916930 + AT_rich Low_complexity Low_complexity 1 35 0 291 93 0 0 chr2 21339698 21339741 -231916842 + (TG)n Simple_repeat Simple_repeat 2 44 0 2834 224 62 37 chr2 21339749 21340068 -231916515 - L1ME1 LINE L1 -5 6161 5851 2090 93 4 0 chr2 21340068 21340347 -231916236 - AluSp SINE Alu -11 302 23 2834 224 62 37 chr2 21340347 21341605 -231914978 - L1ME1 LINE L1 -315 5851 4547 302 355 61 22 chr2 21341696 21341924 -231914659 - L1ME LINE L1 -459 5662 5426 2510 61 0 0 chr2 21342030 21342325 -231914258 - AluY SINE Alu -16 295 1 978 180 12 6 chr2 21342646 21342818 -231913765 - AluSc SINE Alu -16 293 121 1733 216 67 13 chr2 21342822 21343487 -231913096 - L1M4 LINE L1 -400 5778 5061 2164 137 103 5 chr2 21343487 21343875 -231912708 - MSTC LTR MaLR -2 426 1 1733 216 67 13 chr2 21343875 21343964 -231912619 - L1M4 LINE L1 -1117 5061 4978 513 207 0 0 chr2 21343965 21344052 -231912531 - Tigger5 DNA MER2_type 0 2323 2237 529 189 11 0 chr2 21344064 21344154 -231912429 + Tigger5 DNA MER2_type 2 92 -2231 302 176 0 0 chr2 21344211 21344262 -231912321 - Tigger5 DNA MER2_type -2271 52 2 554 160 42 17 chr2 21344264 21344383 -231912200 - L1M4 LINE L1 -1166 4980 4859 4841 205 100 10 chr2 21344385 21345624 -231910959 + Charlie1a DNA MER1_type 104 1454 -1 905 326 98 22 chr2 21345690 21345921 -231910662 - L2 LINE L2 -225 3088 2876 204 40 0 0 chr2 21345921 21345946 -231910637 + (TGG)n Simple_repeat Simple_repeat 1 25 0 905 326 98 22 chr2 21345946 21346309 -231910274 - L2 LINE L2 -437 2876 2434 27 0 0 0 chr2 21346377 21346404 -231910179 + AT_rich Low_complexity Low_complexity 1 27 0 1029 220 0 40 chr2 21346546 21346769 -231909814 - MER20 DNA MER1_type 0 219 6 1226 175 72 7 chr2 21347456 21347762 -231908821 + MER33 DNA MER1_type 1 317 -7 41 58 0 0 chr2 21347986 21348055 -231908528 + AT_rich Low_complexity Low_complexity 1 69 0 305 188 35 0 chr2 21348694 21348779 -231907804 + (TA)n Simple_repeat Simple_repeat 1 88 0 237 122 78 0 chr2 21348803 21348918 -231907665 + (TA)n Simple_repeat Simple_repeat 1 124 0 1055 315 71 40 chr2 21348997 21349702 -231906881 - ERVL LTR ERVL -1579 4185 3459 23 33 0 0 chr2 21351073 21351103 -231905480 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr2 21357899 21357929 -231898654 + AT_rich Low_complexity Low_complexity 1 30 0 474 252 0 0 chr2 21358282 21358385 -231898198 - MIR SINE MIR -3 259 157 245 312 95 12 chr2 21358876 21358983 -231897600 - MIR SINE MIR -85 123 38 682 213 11 44 chr2 21359606 21359789 -231896794 - MER5B DNA MER1_type 0 178 2 186 335 37 31 chr2 21360437 21360566 -231896017 - L2 LINE L2 -960 2354 2225 953 250 45 16 chr2 21360566 21360810 -231895773 + MIR SINE MIR 4 254 -8 312 118 52 46 chr2 21361130 21361283 -231895300 + (TA)n Simple_repeat Simple_repeat 1 154 0 358 136 34 0 chr2 21362756 21362815 -231893768 - Alu SINE Alu -1 300 240 1042 100 7 0 chr2 21362816 21362956 -231893627 - AluSq/x SINE Alu -170 143 3 2388 67 0 7 chr2 21363319 21363616 -231892967 - AluSg SINE Alu -15 295 1 6338 81 17 63 chr2 21364785 21365590 -231890993 - L1PA10 LINE L1 -3 6165 5376 2281 63 0 70 chr2 21365590 21365906 -231890677 - AluY SINE Alu -13 298 5 6338 81 17 63 chr2 21365906 21366099 -231890484 - L1PA10 LINE L1 -792 5376 5176 9152 130 15 6 chr2 21366103 21367574 -231889009 + L1PA10 LINE L1 3704 5187 -959 21 0 0 0 chr2 21367680 21367701 -231888882 + AT_rich Low_complexity Low_complexity 1 21 0 193 327 209 0 chr2 21367988 21368098 -231888485 - L2 LINE L2 -3 3269 3137 272 264 0 0 chr2 21368280 21368352 -231888231 - MLT2F LTR ERVL -590 73 2 291 348 28 0 chr2 21368355 21368496 -231888087 - HAL1 LINE L1 -861 1646 1502 612 303 122 36 chr2 21368623 21368760 -231887823 - L1MEd LINE L1 -4862 1257 1133 180 0 0 0 chr2 21368760 21368780 -231887803 + (TTA)n Simple_repeat Simple_repeat 3 22 0 612 303 122 36 chr2 21368780 21369339 -231887244 - L1MEd LINE L1 -4986 1133 501 188 75 0 50 chr2 21369367 21369407 -231887176 + (TTTTTG)n Simple_repeat Simple_repeat 3 40 0 3640 202 71 11 chr2 21369654 21370365 -231886218 + L1MB7 LINE L1 5073 5864 -320 7213 133 42 24 chr2 21370365 21371143 -231885440 + HSMAR2 DNA Mariner 4 815 -487 180 0 0 0 chr2 21371143 21371163 -231885420 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 7213 133 42 24 chr2 21371163 21371660 -231884923 + HSMAR2 DNA Mariner 815 1302 0 3640 202 71 11 chr2 21371660 21372002 -231884581 + L1MB7 LINE L1 5864 6184 0 402 229 166 36 chr2 21372585 21372808 -231883775 - L1ME3A LINE L1 -301 5869 5618 282 333 119 6 chr2 21372837 21372996 -231883587 - LTR16C LTR ERVL -10 481 305 547 355 27 37 chr2 21373448 21373929 -231882654 - ERVL LTR ERVL -561 5203 4728 2311 103 3 0 chr2 21374073 21374374 -231882209 - AluSp SINE Alu -11 302 1 5818 170 26 126 chr2 21374790 21376269 -231880314 - MER52A LTR ERV1 0 1755 425 326 257 267 0 chr2 21376255 21376356 -231880227 - MER52A LTR ERV1 -1582 173 46 * 2527 99 8 11 chr2 21376506 21376869 -231879714 - THE1B LTR MaLR -2 362 1 344 300 35 117 chr2 21376946 21377349 -231879234 + L1M2 LINE L1 884 1253 -5596 882 260 91 33 chr2 21377860 21378221 -231878362 - L1M4 LINE L1 -2300 3846 3465 * 982 256 75 26 chr2 21378212 21378599 -231877984 - L1MB7 LINE L1 -95 6089 5684 23 54 0 0 chr2 21378922 21378959 -231877624 + AT_rich Low_complexity Low_complexity 1 37 0 375 263 161 7 chr2 21379949 21380086 -231876497 - L1MB7 LINE L1 -2154 5654 5497 450 324 45 14 chr2 21380165 21380523 -231876060 - L1MB7 LINE L1 -1980 4166 3798 729 276 75 48 chr2 21380690 21381192 -231875391 - L1ME3A LINE L1 -221 5949 5434 271 206 186 0 chr2 21381200 21381297 -231875286 - L1MC4 LINE L1 -2 8040 7926 301 227 0 0 chr2 21381355 21381421 -231875162 - L1MC4 LINE L1 -1337 6705 6640 378 275 99 6 chr2 21381422 21381604 -231874979 - L1MC4 LINE L1 -124 7918 7720 499 250 73 28 chr2 21381843 21382091 -231874492 - L1MEd LINE L1 -4874 1245 987 637 265 105 32 chr2 21382125 21382468 -231874115 - L1ME3A LINE L1 -1049 5097 4730 334 235 196 40 chr2 21382529 21382866 -231873717 - L1ME LINE L1 -514 5648 5259 408 236 94 0 chr2 21382871 21382998 -231873585 + MER3 DNA MER1_type 6 144 -65 3096 85 0 2 chr2 21383023 21383435 -231873148 - L1PB1 LINE L1 -69 6082 5672 * 4069 180 7 1 chr2 21383431 21384375 -231872208 - L1PB1 LINE L1 -714 5437 4488 282 122 0 0 chr2 21384390 21384439 -231872144 + MER3 DNA MER1_type 142 190 -19 2765 150 65 58 chr2 21384537 21385138 -231871445 + L1MA9 LINE L1 5324 5928 -384 817 279 107 23 chr2 21385139 21385486 -231871097 - MSTD LTR MaLR 0 396 21 905 207 7 14 chr2 21385488 21385687 -231870896 - MLT-int LTR MaLR -98 1580 1296 921 234 62 8 chr2 21385709 21385966 -231870617 - LTR56 LTR ERV1 0 445 175 3286 142 110 0 chr2 21385984 21386582 -231870001 - LTR51 LTR ERV1 0 671 8 1024 249 58 4 chr2 21386583 21386840 -231869743 - MST-int LTR MaLR -581 1070 800 1098 259 83 10 chr2 21386841 21387154 -231869429 + MLT-int LTR MaLR 504 839 -896 225 367 100 0 chr2 21387305 21387395 -231869188 + L2 LINE L2 3163 3261 -11 25 65 0 0 chr2 21387770 21387816 -231868767 + AT_rich Low_complexity Low_complexity 1 46 0 1043 215 33 0 chr2 21388040 21388254 -231868329 - AluJo SINE Alu -2 310 90 1402 287 129 24 chr2 21388464 21389410 -231867173 + L2 LINE L2 2241 3286 -27 1373 136 82 29 chr2 21391007 21391250 -231865333 + MER44D DNA MER2_type 1 526 -83 30 59 0 0 chr2 21391313 21391364 -231865219 + AT_rich Low_complexity Low_complexity 1 51 0 1176 165 5 0 chr2 21391427 21391615 -231864968 - MER2 DNA MER2_type -156 189 1 388 200 24 12 chr2 21391615 21391699 -231864884 + MER44D DNA MER2_type 519 603 -2 588 285 31 35 chr2 21392342 21392570 -231864013 - L2 LINE L2 0 3313 3087 363 314 45 6 chr2 21392617 21392773 -231863810 - L2 LINE L2 -708 2606 2445 1603 272 90 2 chr2 21393122 21393589 -231862994 + LTR33 LTR ERVL 1 508 -13 308 250 0 23 chr2 21393595 21393683 -231862900 - LTR67 LTR ERVL -14 543 458 180 0 0 0 chr2 21393857 21393877 -231862706 + (A)n Simple_repeat Simple_repeat 1 20 0 2864 307 56 37 chr2 21394316 21395808 -231860775 - ERVL LTR ERVL -339 5425 3906 1213 338 83 24 chr2 21395991 21396773 -231859810 - ERVL LTR ERVL -2657 2997 2170 1303 97 0 0 chr2 21396774 21396939 -231859644 + AluSp SINE Alu 136 300 -13 1012 326 96 42 chr2 21397186 21398180 -231858403 - ERVL LTR ERVL -3837 1927 881 513 0 0 0 chr2 21398779 21398836 -231857747 + (TA)n Simple_repeat Simple_repeat 2 58 0 366 98 0 0 chr2 21398837 21398888 -231857695 - Alu SINE Alu -250 51 1 407 337 112 6 chr2 21399288 21399466 -231857117 - LTR67 LTR ERVL -323 234 38 21 71 0 0 chr2 21399733 21399775 -231856808 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr2 21399846 21399867 -231856716 + AT_rich Low_complexity Low_complexity 1 21 0 219 317 93 6 chr2 21399965 21400126 -231856457 + L2 LINE L2 2026 2200 -1114 242 253 32 118 chr2 21400340 21400526 -231856057 + L2 LINE L2 2885 3054 -218 2235 128 122 8 chr2 21400700 21401084 -231855499 - MSTA LTR MaLR 0 428 1 31 0 0 0 chr2 21401183 21401214 -231855369 + AT_rich Low_complexity Low_complexity 1 31 0 20244 33 3 0 chr2 21401214 21401548 -231855035 - L1PA3 LINE L1 -2 6153 5821 1942 23 0 0 chr2 21401548 21401764 -231854819 - AluYb8 SINE Alu -3 315 100 20244 33 3 0 chr2 21401764 21404670 -231851913 - L1PA3 LINE L1 -334 5821 2918 21 0 0 0 chr2 21405178 21405199 -231851384 + AT_rich Low_complexity Low_complexity 1 21 0 626 118 10 0 chr2 21405448 21405550 -231851033 + (TCTCC)n Simple_repeat Simple_repeat 1 103 0 342 285 81 29 chr2 21406153 21406325 -231850258 + L2 LINE L2 2910 3090 -182 244 275 114 8 chr2 21406551 21406682 -231849901 + L1ME4a LINE L1 5782 5926 -195 424 226 20 20 chr2 21406995 21407097 -231849486 - MER96 DNA MER1_type? -11 164 63 263 236 31 39 chr2 21407568 21407695 -231848888 + L1 LINE L1 4733 4858 -1288 207 0 0 0 chr2 21407904 21407927 -231848656 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 324 0 0 0 chr2 21407926 21407962 -231848621 + (GA)n Simple_repeat Simple_repeat 2 37 0 1262 153 81 0 chr2 21407965 21408174 -231848409 - MLT1B LTR MaLR 0 390 165 2131 123 3 0 chr2 21408193 21408494 -231848089 + AluSc SINE Alu 8 309 0 216 0 0 0 chr2 21410177 21410201 -231846382 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 243 236 18 0 chr2 21410570 21410625 -231845958 + (TA)n Simple_repeat Simple_repeat 2 57 0 199 261 138 0 chr2 21411008 21411073 -231845510 - L2 LINE L2 -58 3255 3182 235 302 10 52 chr2 21414370 21414466 -231842117 - L1ME3A LINE L1 -115 6055 5964 473 187 24 8 chr2 21414639 21414762 -231841821 - L1MEc LINE L1 -2853 3362 3238 2044 258 55 20 chr2 21414776 21415846 -231840737 - L1MEc LINE L1 -3113 3102 2041 413 296 83 28 chr2 21416014 21416230 -231840353 - L1ME3A LINE L1 -255 5915 5688 264 224 13 0 chr2 21416281 21416357 -231840226 - L1M4 LINE L1 -3490 2656 2580 * 3318 258 36 25 chr2 21416356 21417471 -231839112 + L1M4 LINE L1 2437 3569 -2577 1847 175 7 0 chr2 21417471 21417779 -231838804 + AluSx SINE Alu 1 310 -2 3318 258 36 25 chr2 21417779 21417930 -231838653 + L1M4 LINE L1 3569 3717 -2429 477 262 9 0 chr2 21418613 21418720 -231837863 + MER81 DNA DNA 5 112 -2 1320 136 5 0 chr2 21419961 21420181 -231836402 - L1MA6 LINE L1 0 6300 6080 2290 138 11 16 chr2 21421109 21421486 -231835097 - THE1C LTR MaLR 0 375 1 1102 239 4 9 chr2 21422094 21422320 -231834263 - LTR40b LTR ERVL -15 447 223 399 218 99 0 chr2 21422331 21422432 -231834151 - MER45B DNA AcHobo 0 1040 930 252 174 0 0 chr2 21422426 21422472 -231834111 - MER45B DNA AcHobo -348 692 647 * 212 59 29 0 chr2 21422503 21422537 -231834046 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 44202 39 0 2 chr2 21422537 21428694 -231827889 - L1PA3 LINE L1 -6 6149 1 2702 219 37 44 chr2 21428700 21428796 -231827787 - MER45B DNA AcHobo -392 648 553 2329 102 0 6 chr2 21428796 21429109 -231827474 + AluSq SINE Alu 1 311 -2 2702 219 37 44 chr2 21429109 21429665 -231826918 - MER45B DNA AcHobo -487 553 1 935 247 27 14 chr2 21429671 21429894 -231826689 - LTR40c LTR ERVL -239 226 1 474 335 166 24 chr2 21430267 21430688 -231825895 - L2 LINE L2 -5 3308 2828 4027 156 33 4 chr2 21430710 21431474 -231825109 + L1MA4 LINE L1 5514 6299 -1 238 204 0 0 chr2 21431564 21431608 -231824975 + CT-rich Low_complexity Low_complexity 1 44 0 1881 245 103 45 chr2 21432741 21434267 -231822316 - L1MEc LINE L1 -3355 2860 1281 406 276 67 22 chr2 21435139 21435273 -231821310 + MIR3 SINE MIR 3 142 -66 21 0 0 0 chr2 21435292 21435313 -231821270 + AT_rich Low_complexity Low_complexity 1 21 0 338 267 24 15 chr2 21435324 21435460 -231821123 + L1MC4 LINE L1 1983 7011 -1311 1191 254 86 26 chr2 21436275 21436914 -231819669 - L2 LINE L2 0 3313 2631 613 262 47 31 chr2 21438230 21438443 -231818140 - MLT1J2 LTR MaLR -38 473 192 39 60 0 0 chr2 21438635 21438702 -231817881 + AT_rich Low_complexity Low_complexity 1 67 0 2530 49 0 10 chr2 21439110 21439416 -231817167 + AluY SINE Alu 1 303 -8 421 251 150 43 chr2 21440511 21440718 -231815865 + MIR SINE MIR 34 262 0 269 252 107 0 chr2 21441059 21441162 -231815421 - L1MC4a LINE L1 -1884 5924 5811 1219 231 37 27 chr2 21441184 21441560 -231815023 - L1MA9 LINE L1 -37 6275 5896 304 341 118 14 chr2 21441562 21441782 -231814801 - L1MC4a LINE L1 -1997 5811 5569 501 244 8 0 chr2 21442017 21442148 -231814435 + L1MD2 LINE L1 6209 6340 -19 213 324 62 41 chr2 21442411 21442556 -231814027 - MIR SINE MIR -55 207 60 351 356 111 6 chr2 21442817 21442997 -231813586 - MIR SINE MIR -18 244 46 458 311 128 32 chr2 21443511 21443730 -231812853 - MIR SINE MIR -6 256 17 183 382 146 0 chr2 21443982 21444126 -231812457 + L2 LINE L2 2172 2336 -978 450 331 163 11 chr2 21444160 21444528 -231812055 + L2 LINE L2 2458 2881 -433 321 321 54 68 chr2 21444534 21444755 -231811828 + L2 LINE L2 3046 3263 -9 397 232 86 21 chr2 21446115 21446291 -231810292 - MIR3 SINE MIR -66 142 9 409 267 15 133 chr2 21447173 21447368 -231809215 + MIR3 SINE MIR 19 190 -18 551 311 43 35 chr2 21447654 21448420 -231808163 - L1ME3A LINE L1 -213 5957 5186 1594 248 128 19 chr2 21448444 21448976 -231807607 + MLT1G1 LTR MaLR 1 590 -5 315 345 88 0 chr2 21449099 21449247 -231807336 - L1ME3A LINE L1 -1076 5070 4910 274 263 127 33 chr2 21449320 21449533 -231807050 - L1ME3A LINE L1 -1353 4793 4561 2341 244 75 24 chr2 21449636 21451084 -231805499 - L1ME2 LINE L1 -9 6155 4622 1604 188 79 3 chr2 21451184 21451524 -231805059 + MLT2C2 LTR ERVL 1 366 -98 288 89 44 0 chr2 21451627 21451672 -231804911 + MADE1 DNA Mariner 32 78 -2 978 290 107 0 chr2 21452792 21453102 -231803481 - L2 LINE L2 -2823 491 149 721 309 64 14 chr2 21453135 21453417 -231803166 + L2 LINE L2 2491 2786 -528 4420 206 21 14 chr2 21453423 21454694 -231801889 - L1PA13 LINE L1 -11 6152 4892 366 23 0 0 chr2 21454694 21454737 -231801846 + (TTA)n Simple_repeat Simple_repeat 3 45 0 3631 28 2 0 chr2 21454737 21455164 -231801419 - L1PA4 LINE L1 -18 6137 5710 4420 206 21 14 chr2 21455164 21455590 -231800993 - L1PA13 LINE L1 -1270 4893 4433 550 284 165 48 chr2 21455624 21456018 -231800565 + L2 LINE L2 2812 3251 -62 413 329 117 46 chr2 21457171 21457742 -231798841 + L1MC4a LINE L1 4551 5177 -969 195 265 0 0 chr2 21457753 21457802 -231798781 - L2 LINE L2 0 3313 3265 808 293 104 42 chr2 21457858 21458654 -231797929 + L1MC4a LINE L1 5270 6115 -6 2205 151 70 7 chr2 21460445 21460848 -231795735 - MSTA LTR MaLR 0 428 1 1721 264 12 0 chr2 21460970 21461391 -231795192 + MER20B DNA MER1_type 10 435 -348 454 189 154 0 chr2 21461442 21461611 -231794972 + MER20B DNA MER1_type 525 719 -64 886 211 11 5 chr2 21461988 21462173 -231794410 - MER5A DNA MER1_type -1 188 3 2129 92 0 3 chr2 21462353 21462664 -231793919 - AluY SINE Alu 0 310 1 349 309 83 31 chr2 21463544 21464001 -231792582 + L1M4 LINE L1 4172 4652 -1494 897 257 70 80 chr2 21464242 21464716 -231791867 - L2 LINE L2 -18 3295 2827 292 288 189 7 chr2 21469563 21469716 -231786867 + MIR SINE MIR 80 260 -2 180 423 0 0 chr2 21470773 21470870 -231785713 + L2 LINE L2 3168 3264 -8 594 212 7 55 chr2 21471111 21471257 -231785326 - MLT1A2 LTR MaLR 0 374 236 31 0 0 0 chr2 21471557 21471588 -231784995 + AT_rich Low_complexity Low_complexity 1 31 0 180 261 22 22 chr2 21471603 21471649 -231784934 + L3b LINE CR1 1280 1325 -258 379 311 39 0 chr2 21472200 21472303 -231784280 - MER91C DNA MER1_type 0 140 34 747 219 55 6 chr2 21473091 21473255 -231783328 + MER5A DNA MER1_type 18 189 0 593 152 152 22 chr2 21473272 21473410 -231783173 + MIR SINE MIR 41 196 -66 6885 133 25 44 chr2 21473706 21474973 -231781610 + THE1-int LTR MaLR 264 1505 -75 1438 40 0 0 chr2 21475073 21475246 -231781337 + AluY SINE Alu 137 309 -2 216 143 0 0 chr2 21476854 21476896 -231779687 + (A)n Simple_repeat Simple_repeat 1 42 0 1141 279 88 2 chr2 21477861 21478280 -231778303 + LTR40c LTR ERVL 1 455 -10 2236 99 3 48 chr2 21478634 21478947 -231777636 - AluSp SINE Alu -14 299 1 188 184 18 229 chr2 21479508 21479617 -231776966 - MIR3 SINE MIR -117 91 6 277 319 72 22 chr2 21479865 21480003 -231776580 + L2 LINE L2 2916 3060 -212 316 314 60 22 chr2 21480133 21480318 -231776265 + L2 LINE L2 2252 2443 -871 630 144 0 42 chr2 21480421 21480539 -231776044 - MLT1A1 LTR MaLR -252 113 1 277 274 27 0 chr2 21481385 21481458 -231775125 + MIR SINE MIR 118 192 -70 1002 224 12 10 chr2 21481602 21481855 -231774728 + MIR SINE MIR 3 259 -3 787 272 98 13 chr2 21481859 21482054 -231774529 - L1MD2 LINE L1 -10 6349 6117 378 0 0 0 chr2 21482054 21482096 -231774487 + (TG)n Simple_repeat Simple_repeat 2 43 0 787 272 98 13 chr2 21482096 21482205 -231774378 - L1MD2 LINE L1 -242 6117 6019 202 307 52 33 chr2 21482291 21482444 -231774139 + L3 LINE CR1 1420 1575 -2 251 111 0 0 chr2 21483612 21483648 -231772935 + MIR SINE MIR 111 146 -62 2359 30 0 0 chr2 21483945 21484209 -231772374 - AluY SINE Alu -17 294 31 417 328 119 42 chr2 21485826 21486186 -231770397 + L2 LINE L2 2833 3220 -52 211 311 0 0 chr2 21486806 21486867 -231769716 + MIR SINE MIR 83 143 -65 1776 62 0 0 chr2 21488588 21488818 -231767765 - AluY SINE Alu 0 311 82 550 270 97 44 chr2 21489498 21489746 -231766837 + LTR16A LTR ERVL 19 279 -171 451 313 0 8 chr2 21490018 21490152 -231766431 + MIR3 SINE MIR 9 141 -67 358 350 33 16 chr2 21491267 21491450 -231765133 - MER5A DNA MER1_type -3 186 1 437 230 75 68 chr2 21493100 21493261 -231763322 + MER63A DNA MER1_type 12 173 -37 317 296 15 61 chr2 21493664 21493796 -231762787 - MIR SINE MIR -63 145 20 2219 118 0 28 chr2 21494646 21494967 -231761616 + AluSx SINE Alu 1 312 0 264 122 0 0 chr2 21496861 21496902 -231759681 + (ATG)n Simple_repeat Simple_repeat 3 43 0 227 304 0 0 chr2 21498023 21498092 -231758491 + (TG)n Simple_repeat Simple_repeat 1 69 0 185 349 0 0 chr2 21498969 21499035 -231757548 + L2 LINE L2 3248 3313 0 339 269 40 51 chr2 21500110 21500293 -231756290 - MIR3 SINE MIR -59 149 6 2228 128 0 10 chr2 21501018 21501331 -231755252 - AluSx SINE Alu 0 312 3 702 175 6 11 chr2 21503288 21503352 -231753231 + (TG)n Simple_repeat Simple_repeat 1 64 -112 1838 199 15 0 chr2 21503352 21503693 -231752890 + MER7A DNA MER2_type 3 346 0 702 175 6 11 chr2 21503693 21503805 -231752778 + (TG)n Simple_repeat Simple_repeat 64 176 0 207 220 0 102 chr2 21504665 21504724 -231751859 + MIR SINE MIR 93 145 -117 328 259 0 0 chr2 21505802 21505883 -231750700 + MER112 DNA MER1_type 3 83 -177 257 277 71 9 chr2 21506038 21506150 -231750433 + MER112 DNA MER1_type 100 218 -42 2389 89 3 3 chr2 21506481 21506783 -231749800 + AluSg SINE Alu 1 302 -8 429 307 76 13 chr2 21506792 21507017 -231749566 - MIR SINE MIR -7 255 17 366 258 53 15 chr2 21507490 21507622 -231748961 + MIR SINE MIR 69 205 -57 21 36 0 0 chr2 21507622 21507650 -231748933 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr2 21511076 21511099 -231745484 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 21513501 21513523 -231743060 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr2 21514342 21514364 -231742219 + (TG)n Simple_repeat Simple_repeat 2 23 0 219 315 125 51 chr2 21514575 21514791 -231741792 + L2 LINE L2 3004 3235 -37 2028 216 49 70 chr2 21515904 21515964 -231740619 - MLT2B1 LTR ERVL 0 520 460 1277 219 4 4 chr2 21515964 21516202 -231740381 + MER8 DNA MER2_type 2 239 0 2028 216 49 70 chr2 21516202 21516670 -231739913 - MLT2B1 LTR ERVL -60 460 3 242 362 9 17 chr2 21519336 21519452 -231737131 + L2 LINE L2 3153 3267 -5 312 290 21 0 chr2 21520952 21521045 -231735538 + GA-rich Low_complexity Low_complexity 2 96 0 232 318 217 23 chr2 21521116 21521333 -231735250 - L2 LINE L2 -467 2847 2589 181 346 0 48 chr2 21521939 21522043 -231734540 - L2 LINE L2 -2915 399 301 672 292 92 49 chr2 21523144 21523535 -231733048 + HERV16 LTR ERVL 2 409 -4587 1008 296 60 82 chr2 21523639 21524584 -231731999 + HERV16 LTR ERVL 1760 2684 -2312 7086 184 47 11 chr2 21524588 21526184 -231730399 - Charlie5 DNA MER1_type 0 2624 972 762 160 8 0 chr2 21526201 21526326 -231730257 - FLAM_A SINE Alu -16 126 1 3796 213 31 26 chr2 21526326 21527182 -231729401 - Charlie5 DNA MER1_type -41 121 130 2226 88 7 3 chr2 21527182 21527476 -231729107 - AluY SINE Alu -16 295 1 3796 213 31 26 chr2 21527476 21527635 -231728948 - Charlie5 DNA MER1_type -31 131 1 2750 345 64 32 chr2 21527636 21529245 -231727338 + HERV16 LTR ERVL 2748 4408 -1356 1786 164 3 3 chr2 21529570 21529863 -231726720 - AluSx SINE Alu -14 298 6 221 276 149 45 chr2 21532705 21532839 -231723744 - MER5A DNA MER1_type -24 165 18 669 222 17 45 chr2 21532860 21533036 -231723547 + MIR SINE MIR 56 226 -36 24 0 0 0 chr2 21534680 21534704 -231721879 + AT_rich Low_complexity Low_complexity 1 24 0 229 328 35 60 chr2 21534736 21534852 -231721731 - L2 LINE L2 -22 3250 3138 243 0 0 0 chr2 21535226 21535253 -231721330 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 194 250 0 21 chr2 21535360 21535408 -231721175 + L2 LINE L2 3264 3310 -3 240 333 81 21 chr2 21536768 21536954 -231719629 + MIR3 SINE MIR 3 199 -9 196 361 111 19 chr2 21537468 21537676 -231718907 + L2 LINE L2 2428 2654 -660 1633 305 64 35 chr2 21538212 21539440 -231717143 - L1M4 LINE L1 -2752 3394 2131 1630 167 0 22 chr2 21539691 21539960 -231716623 - AluJo SINE Alu -49 263 1 1957 167 42 11 chr2 21540226 21540338 -231716245 - L1MB7 LINE L1 -11 6173 6066 4148 38 0 2 chr2 21540338 21540808 -231715775 - L1PA5 LINE L1 0 6154 5686 1957 167 42 11 chr2 21540808 21541073 -231715510 - L1MB7 LINE L1 -118 6066 5784 206 213 0 21 chr2 21542644 21542691 -231713892 + L2 LINE L2 3266 3311 -2 228 254 18 0 chr2 21542982 21543037 -231713546 + L2 LINE L2 3217 3272 0 2440 70 7 0 chr2 21543073 21543372 -231713211 + AluSx SINE Alu 11 311 -1 292 292 0 22 chr2 21543851 21543940 -231712643 + MER5B DNA MER1_type 82 168 -10 383 231 30 75 chr2 21543988 21544122 -231712461 + MER5A DNA MER1_type 57 184 -5 373 236 300 29 chr2 21544128 21544268 -231712315 - MER5B DNA MER1_type 0 178 1 242 328 82 0 chr2 21544463 21544585 -231711998 + L1ME4a LINE L1 4037 4168 -1978 351 165 101 0 chr2 21544622 21544701 -231711882 - L1MB8 LINE L1 -1 6177 6091 412 317 52 24 chr2 21544782 21544932 -231711651 + L1ME4a LINE L1 4265 4409 -1737 1948 149 3 13 chr2 21544932 21545247 -231711336 - AluJb SINE Alu 0 312 1 412 317 52 24 chr2 21545247 21545519 -231711064 + L1ME4a LINE L1 4409 4699 -1447 673 285 33 50 chr2 21545971 21546332 -231710251 + L1ME4a LINE L1 5501 5855 -266 1886 179 44 11 chr2 21547048 21547484 -231709099 + MER89 LTR ERV1 1 550 -9 1054 219 47 78 chr2 21547983 21548366 -231708217 + MLT2D LTR ERVL 1 371 -43 229 233 26 43 chr2 21548368 21548484 -231708099 + (TA)n Simple_repeat Simple_repeat 2 115 0 213 65 0 0 chr2 21549781 21549812 -231706771 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 247 265 94 34 chr2 21549934 21550051 -231706532 - L2 LINE L2 -208 3064 2941 416 261 92 76 chr2 21550886 21551124 -231705459 - L2 LINE L2 -2 3311 3070 1059 200 128 11 chr2 21551180 21551239 -231705344 - L1MB7 LINE L1 -16 6168 6117 2455 78 0 0 chr2 21551239 21551535 -231705048 - AluY SINE Alu -15 296 1 1059 200 128 11 chr2 21551535 21551740 -231704843 - L1MB7 LINE L1 -67 6117 5873 956 110 158 0 chr2 21551743 21551907 -231704676 + MER30 DNA MER1_type 1 190 -40 44469 41 6 1 chr2 21551908 21558044 -231698539 + L1PA4 LINE L1 2 6165 0 228 245 0 0 chr2 21558044 21558093 -231698490 + MER30 DNA MER1_type 182 230 0 2070 202 20 5 chr2 21558131 21558571 -231698012 - L1MB7 LINE L1 -365 5819 5373 928 235 151 10 chr2 21558553 21558851 -231697732 - L1MB7 LINE L1 -1743 4403 4064 * 617 274 50 17 chr2 21558986 21559227 -231697356 - L2 LINE L2 -1069 2245 1997 726 235 93 99 chr2 21560877 21561383 -231695200 + LTR33 LTR ERVL 4 506 -15 216 0 0 0 chr2 21562053 21562077 -231694506 + (T)n Simple_repeat Simple_repeat 1 24 0 259 328 15 0 chr2 21563648 21563715 -231692868 + MLT2F LTR ERVL 186 253 -410 469 312 42 33 chr2 21564638 21564853 -231691730 - MIR SINE MIR -20 242 26 194 105 26 0 chr2 21565080 21565118 -231691465 + (TCTA)n Simple_repeat Simple_repeat 3 41 0 820 250 25 33 chr2 21565139 21565637 -231690946 - MLT2F LTR ERVL -57 606 6 2709 7 0 0 chr2 21565891 21566182 -231690401 + AluY SINE Alu 21 311 0 252 0 0 0 chr2 21569138 21569166 -231687417 + (TG)n Simple_repeat Simple_repeat 1 28 0 42 48 0 0 chr2 21569294 21569357 -231687226 + AT_rich Low_complexity Low_complexity 1 63 0 23 33 0 0 chr2 21569581 21569611 -231686972 + AT_rich Low_complexity Low_complexity 1 30 0 2521 124 21 24 chr2 21570215 21570594 -231685989 + MER83B LTR ERV1 1 378 0 358 305 89 32 chr2 21572279 21572469 -231684114 + MIR3 SINE MIR 3 203 -5 223 226 119 83 chr2 21572891 21572975 -231683608 - L3 LINE CR1 -1 1576 1490 487 241 171 6 chr2 21572976 21573134 -231683449 + MER5A DNA MER1_type 4 187 -2 194 318 32 0 chr2 21573134 21573196 -231683387 - L3 LINE CR1 -77 1500 1437 319 228 50 40 chr2 21573280 21573381 -231683202 - MIR SINE MIR -10 252 151 503 301 87 6 chr2 21573386 21573559 -231683024 - MIR SINE MIR -71 191 5 438 314 251 23 chr2 21573561 21574000 -231682583 - L3 LINE CR1 -201 1376 838 657 281 63 48 chr2 21574153 21574484 -231682099 - L3 LINE CR1 -758 819 484 2061 263 67 18 chr2 21574661 21575273 -231681310 - MLT2F LTR ERVL -6 657 16 2745 271 60 31 chr2 21575273 21576264 -231680319 - ERVL-F LTR ERVL -40 5724 4705 2113 220 72 28 chr2 21576240 21576327 -231680256 + ERVL LTR ERVL 2306 2388 -3376 * 2591 58 0 6 chr2 21576327 21576638 -231679945 - AluY SINE Alu -2 309 1 2113 220 72 28 chr2 21576638 21577081 -231679502 + ERVL LTR ERVL 2388 2859 -2905 206 214 376 34 chr2 21577320 21577437 -231679146 + MIR SINE MIR 48 204 -58 205 337 27 38 chr2 21577516 21577678 -231678905 - MIR SINE MIR -72 136 2 21 0 0 0 chr2 21577991 21578012 -231678571 + AT_rich Low_complexity Low_complexity 1 21 0 557 207 9 182 chr2 21578461 21578790 -231677793 - TAR1 Satellite telomeric -1831 280 9 * 3621 129 7 24 chr2 21578584 21578790 -231677793 - LTR60 LTR ERV1 -1 585 377 1695 246 55 66 chr2 21578790 21579408 -231677175 - LTR9 LTR ERV1 0 612 2 3621 129 7 24 chr2 21579408 21579796 -231676787 - LTR60 LTR ERV1 -209 377 1 272 310 120 21 chr2 21580199 21580341 -231676242 - MIR SINE MIR -44 218 63 280 300 0 0 chr2 21581094 21581174 -231675409 + MER116 DNA Mariner 1 80 0 433 202 0 45 chr2 21581191 21581280 -231675303 + L2 LINE L2 3229 3313 0 2166 126 0 0 chr2 21582403 21582496 -231674087 - AluSx SINE Alu 0 464 372 567 43 0 0 chr2 21582496 21582566 -231674017 + (TTCC)n Simple_repeat Simple_repeat 2 71 0 2166 126 0 0 chr2 21582566 21582867 -231673716 - AluSx SINE Alu -91 373 1 1554 291 59 12 chr2 21583255 21583749 -231672834 + MER69 DNA AcHobo 1 517 -709 1028 220 89 18 chr2 21583753 21584080 -231672503 + MER69 DNA AcHobo 2170 2519 -7 211 226 0 19 chr2 21584550 21584603 -231671980 + MIR SINE MIR 96 147 -115 440 214 12 23 chr2 21585760 21586020 -231670563 + CT-rich Low_complexity Low_complexity 1 257 0 210 245 113 0 chr2 21586062 21586115 -231670468 - L2 LINE L2 -35 3237 3179 558 0 0 0 chr2 21586756 21586818 -231669765 + (TA)n Simple_repeat Simple_repeat 1 62 0 418 287 61 49 chr2 21586879 21587043 -231669540 + MIR SINE MIR 15 180 -82 632 209 23 6 chr2 21587522 21587699 -231668884 + GA-rich Low_complexity Low_complexity 1 180 0 252 77 0 0 chr2 21588139 21588178 -231668405 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 604 254 136 40 chr2 21588551 21588779 -231667804 + MIR SINE MIR 13 262 0 223 404 22 7 chr2 21588944 21589080 -231667503 - L3 LINE CR1 -6 1571 1434 402 57 0 0 chr2 21589759 21589812 -231666771 + (CA)n Simple_repeat Simple_repeat 2 54 0 1969 122 0 4 chr2 21589832 21590111 -231666472 - AluSq SINE Alu 0 313 36 610 299 27 0 chr2 21590161 21590348 -231666235 - MIR SINE MIR -64 198 7 578 352 52 53 chr2 21590822 21591239 -231665344 + L2 LINE L2 2842 3255 -17 422 237 38 23 chr2 21591938 21592069 -231664514 + MER94 DNA DNA 1 133 -1 311 247 54 0 chr2 21592533 21592626 -231663957 + CT-rich Low_complexity Low_complexity 4 101 0 188 200 127 36 chr2 21594036 21594091 -231662492 - L2 LINE L2 -18 3254 3195 3035 68 11 0 chr2 21594093 21594444 -231662139 - THE1A LTR MaLR 0 355 1 10929 111 9 38 chr2 21594444 21596072 -231660511 - THE1A-int LTR MaLR 0 1580 1 2925 90 0 0 chr2 21596072 21596427 -231660156 - THE1A LTR MaLR 0 355 1 218 171 0 24 chr2 21596442 21596483 -231660100 - MER5B DNA MER1_type -17 161 122 4938 183 33 8 chr2 21596491 21598028 -231658555 + L1MB2 LINE L1 4564 6135 -36 183 246 49 16 chr2 21598100 21598161 -231658422 + MER5B DNA MER1_type 110 172 -6 246 206 109 33 chr2 21601494 21601586 -231654997 - MIR SINE MIR -80 182 84 2535 146 67 5 chr2 21601813 21602216 -231654367 + MSTA LTR MaLR 1 428 0 267 79 0 0 chr2 21602673 21602711 -231653872 + (TGGA)n Simple_repeat Simple_repeat 2 39 0 315 339 186 17 chr2 21603390 21603680 -231652903 + L3 LINE CR1 893 1233 -340 2181 135 3 0 chr2 21603680 21604013 -231652570 + AluSp SINE Alu 1 313 0 5105 232 42 38 chr2 21605112 21606544 -231650039 + L1MC4 LINE L1 6469 7906 -136 211 331 81 24 chr2 21606617 21606741 -231649842 + MER5A DNA MER1_type 59 189 0 426 314 160 0 chr2 21606749 21606905 -231649678 - MER5A DNA MER1_type 0 189 9 464 349 26 15 chr2 21607785 21608049 -231648534 - L1ME LINE L1 -414 5756 5490 181 280 20 0 chr2 21608057 21608107 -231648476 + MIR SINE MIR 190 240 -22 212 307 67 13 chr2 21608168 21608243 -231648340 + L2 LINE L2 3235 3313 0 289 235 128 2 chr2 21608278 21608372 -231648211 - MIR SINE MIR -75 133 30 295 320 58 17 chr2 21609464 21609636 -231646947 + MIR3 SINE MIR 27 205 -3 1361 198 116 15 chr2 21609789 21610117 -231646466 - MLT1A1 LTR MaLR 0 365 5 206 338 101 14 chr2 21610926 21611074 -231645509 - L3 LINE CR1 -12 1565 1405 212 250 0 0 chr2 21611558 21611606 -231644977 + (CA)n Simple_repeat Simple_repeat 2 49 0 275 306 225 0 chr2 21611878 21611989 -231644594 + MIR3 SINE MIR 54 189 -19 290 317 177 18 chr2 21612261 21612425 -231644158 + MIR3 SINE MIR 18 207 -1 328 297 24 36 chr2 21612567 21612732 -231643851 + LTR16A LTR ERVL 26 188 -262 1395 284 23 34 chr2 21612827 21613267 -231643316 + ERVL LTR ERVL 889 1323 -3673 697 339 16 41 chr2 21613406 21613769 -231642814 + ERVL LTR ERVL 4751 5104 -660 731 274 64 34 chr2 21614187 21614518 -231642065 + LTR16A LTR ERVL 87 447 -3 187 179 0 0 chr2 21614580 21614619 -231641964 + L2 LINE L2 3273 3311 -2 942 279 0 0 chr2 21614933 21615148 -231641435 - MER58A DNA MER1_type -1 223 9 291 328 172 20 chr2 21615533 21615731 -231640852 - L2 LINE L2 -454 2860 2633 * 460 270 15 71 chr2 21615729 21615925 -231640658 + L2 LINE L2 3125 3309 -4 822 175 8 0 chr2 21615972 21616092 -231640491 - FLAM_A SINE Alu -12 121 1 273 313 12 12 chr2 21616313 21616393 -231640190 + MIR SINE MIR 19 98 -110 192 273 0 36 chr2 21616447 21616502 -231640081 + L2 LINE L2 3213 3265 -7 195 325 100 50 chr2 21616659 21616779 -231639804 - L2 LINE L2 -43 3229 3104 911 221 72 0 chr2 21617179 21617374 -231639209 - MER63A DNA MER1_type -1 209 1 442 192 42 50 chr2 21617504 21617624 -231638959 - MER103 DNA DNA -31 135 17 531 209 28 73 chr2 21617646 21617755 -231638828 - MER5A DNA MER1_type -79 99 4 212 372 35 9 chr2 21619006 21619119 -231637464 + L2 LINE L2 3071 3186 -86 2271 159 40 3 chr2 21619149 21619501 -231637082 + MLT1A1 LTR MaLR 1 365 0 247 369 39 0 chr2 21619534 21619664 -231636919 - MIR SINE MIR -47 215 81 719 285 56 86 chr2 21620652 21621312 -231635271 - L2 LINE L2 -549 2765 2126 188 340 75 0 chr2 21621639 21621733 -231634850 - L2 LINE L2 -10 3303 3203 25 0 0 0 chr2 21621775 21621800 -231634783 + AT_rich Low_complexity Low_complexity 1 25 0 259 317 71 60 chr2 21621870 21622284 -231634299 - L2 LINE L2 -208 3064 2633 186 118 0 0 chr2 21622775 21622809 -231633774 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 769 283 19 21 chr2 21624634 21624871 -231631712 + LTR16A LTR ERVL 84 313 -137 1806 203 28 60 chr2 21625163 21625597 -231630986 - MLT1D LTR MaLR -77 428 9 207 146 0 0 chr2 21625896 21625937 -231630646 + (TC)n Simple_repeat Simple_repeat 2 42 0 1593 201 17 0 chr2 21626046 21626344 -231630239 + L1MA4 LINE L1 5991 6293 -7 2192 196 0 12 chr2 21629921 21629966 -231626617 - MLT2C1 LTR ERVL 0 397 353 2390 186 41 7 chr2 21629966 21630385 -231626198 + Tigger2a DNA MER2_type 1 433 -1 2192 196 0 12 chr2 21630385 21630741 -231625842 - MLT2C1 LTR ERVL -44 353 1 266 304 111 73 chr2 21630762 21631078 -231625505 + L2 LINE L2 2944 3271 -42 2473 138 22 5 chr2 21631636 21632005 -231624578 + THE1C LTR MaLR 1 375 0 22 0 0 0 chr2 21635025 21635047 -231621536 + AT_rich Low_complexity Low_complexity 1 22 0 522 278 92 12 chr2 21635075 21635248 -231621335 - MIR SINE MIR -56 206 20 248 351 9 0 chr2 21635815 21635926 -231620657 + G-rich Low_complexity Low_complexity 2 113 0 253 300 346 0 chr2 21636459 21636589 -231619994 - MER5A DNA MER1_type -14 175 1 1977 173 3 32 chr2 21638385 21638761 -231617822 + MLT1A1 LTR MaLR 1 365 0 264 302 91 104 chr2 21639012 21639463 -231617120 - L2 LINE L2 0 3272 2828 256 259 0 0 chr2 21640290 21640344 -231616239 + MIR3 SINE MIR 126 179 -29 247 246 0 0 chr2 21640719 21640776 -231615807 + GA-rich Low_complexity Low_complexity 2 58 0 577 164 0 9 chr2 21641254 21641364 -231615219 - MLT1D LTR MaLR -1 504 396 420 257 101 13 chr2 21641390 21641620 -231614963 + MER21B LTR ERV1 475 808 -123 719 134 24 8 chr2 21642013 21642140 -231614443 - MLT1D LTR MaLR -376 129 1 227 320 80 16 chr2 21642252 21642377 -231614206 + MIR3 SINE MIR 13 145 -63 304 232 14 0 chr2 21642415 21642484 -231614099 + L1ME4a LINE L1 1995 2064 -4362 205 288 0 0 chr2 21642486 21642545 -231614038 + (TA)n Simple_repeat Simple_repeat 2 60 0 649 244 61 50 chr2 21642680 21642860 -231613723 - MIR SINE MIR -73 189 8 181 330 154 0 chr2 21643293 21643384 -231613199 + MIR SINE MIR 48 152 -110 1880 154 44 44 chr2 21644632 21645022 -231611561 + MLT1B LTR MaLR 1 390 0 204 288 14 14 chr2 21645219 21645292 -231611291 + CT-rich Low_complexity Low_complexity 3 75 0 21 57 0 0 chr2 21646320 21646355 -231610228 + AT_rich Low_complexity Low_complexity 1 35 0 2119 141 0 0 chr2 21646604 21646936 -231609647 + AluSc SINE Alu 1 309 0 23 33 0 0 chr2 21647408 21647438 -231609145 + AT_rich Low_complexity Low_complexity 1 30 0 556 302 37 20 chr2 21648187 21648407 -231608176 + MIR SINE MIR 34 250 -12 2224 92 0 7 chr2 21648710 21649003 -231607580 - AluSp SINE Alu -22 291 1 488 295 89 35 chr2 21649111 21649543 -231607040 + L1ME4a LINE L1 2360 2777 -3649 2350 115 31 14 chr2 21650351 21650708 -231605875 + THE1B LTR MaLR 2 364 0 22 0 0 0 chr2 21650718 21650740 -231605843 + AT_rich Low_complexity Low_complexity 1 22 0 367 353 15 50 chr2 21650903 21651229 -231605354 + L1ME4a LINE L1 4855 5178 -1248 2419 119 19 11 chr2 21651327 21651697 -231604886 + THE1C LTR MaLR 1 373 -2 353 243 94 116 chr2 21651759 21652230 -231604353 + L1ME4a LINE L1 5911 6372 -29 2133 155 11 41 chr2 21652230 21652668 -231603915 - L1PB4 LINE L1 -2 6154 5730 353 243 94 116 chr2 21652668 21652698 -231603885 + L1ME4a LINE L1 6372 6401 0 275 204 133 0 chr2 21652984 21653097 -231603486 - L1MC4a LINE L1 -1911 5897 5770 337 306 111 41 chr2 21653177 21653489 -231603094 - L1MC4a LINE L1 -472 5649 5305 792 295 87 55 chr2 21653839 21654103 -231602480 - L1MC4a LINE L1 -1369 4777 4523 2541 110 3 18 chr2 21654103 21654484 -231602099 + THE1C LTR MaLR 1 375 0 792 295 87 55 chr2 21654484 21655003 -231601580 - L1MC4a LINE L1 -1623 4523 3969 2164 111 0 26 chr2 21655343 21655650 -231600933 - AluSg SINE Alu -11 299 1 366 325 41 38 chr2 21657053 21657256 -231599327 - MIR SINE MIR -53 155 1 329 188 102 7 chr2 21658375 21658523 -231598060 + L1MC4 LINE L1 7631 7901 -141 2786 145 75 9 chr2 21658562 21659106 -231597477 + L1MA4 LINE L1 5717 6296 -4 23 0 0 0 chr2 21659145 21659168 -231597415 + AT_rich Low_complexity Low_complexity 1 23 0 568 184 153 55 chr2 21659239 21659378 -231597205 + MER5A DNA MER1_type 9 168 -21 1397 197 51 46 chr2 21659378 21659748 -231596835 + MLT1A2 LTR MaLR 1 372 -2 568 184 153 55 chr2 21659748 21659771 -231596812 + MER5A DNA MER1_type 168 187 -2 180 306 82 12 chr2 21659865 21659950 -231596633 + L2 LINE L2 2879 2969 -303 316 310 23 0 chr2 21660464 21660551 -231596032 - MER5B DNA MER1_type 0 178 90 2184 70 0 4 chr2 21660564 21660834 -231595749 + AluY SINE Alu 40 308 -3 253 288 24 64 chr2 21660834 21660959 -231595624 - MER5B DNA MER1_type -54 124 5 210 350 81 12 chr2 21661327 21661487 -231595096 + L2 LINE L2 2065 2235 -1079 1278 233 158 2 chr2 21661487 21661891 -231594692 - MLT1C LTR MaLR 0 467 1 627 317 68 77 chr2 21661893 21662955 -231593628 + L2 LINE L2 2233 3270 -2 278 302 47 0 chr2 21662974 21663060 -231593523 + L2 LINE L2 3219 3308 -5 224 295 66 33 chr2 21663591 21663713 -231592870 - MIR SINE MIR -50 212 87 610 343 38 4 chr2 21663954 21664190 -231592393 - MIR SINE MIR -17 245 2 533 279 101 22 chr2 21666796 21666975 -231589608 + MIR SINE MIR 5 197 -65 299 315 93 9 chr2 21667195 21667303 -231589280 - L2 LINE L2 -14 3299 3183 23 0 0 0 chr2 21670736 21670759 -231585824 + AT_rich Low_complexity Low_complexity 1 23 0 268 400 9 0 chr2 21670896 21671006 -231585577 + L2 LINE L2 3158 3268 -4 189 0 0 0 chr2 21671832 21671853 -231584730 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 210 143 0 0 chr2 21672081 21672116 -231584467 + (T)n Simple_repeat Simple_repeat 1 35 0 195 42 0 0 chr2 21672608 21672632 -231583951 + (TCCC)n Simple_repeat Simple_repeat 2 25 0 225 259 19 0 chr2 21672637 21672691 -231583892 + CT-rich Low_complexity Low_complexity 2 56 0 2365 252 61 18 chr2 21672693 21673304 -231583279 - L1ME2 LINE L1 -12 6947 6364 189 0 0 0 chr2 21673304 21673325 -231583258 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2365 252 61 18 chr2 21673325 21674115 -231582468 - L1ME2 LINE L1 -595 6364 5493 436 227 97 11 chr2 21674135 21674311 -231582272 - L1MC4a LINE L1 0 7808 7618 458 257 80 53 chr2 21674448 21674860 -231581723 - L1ME2 LINE L1 -4738 2384 1962 342 262 99 28 chr2 21674941 21675082 -231581501 - L1ME2 LINE L1 -5214 1908 1758 428 317 35 7 chr2 21675095 21675441 -231581142 - L1ME2 LINE L1 -4867 1555 1199 300 27 0 0 chr2 21675887 21675924 -231580659 + (CAAAA)n Simple_repeat Simple_repeat 3 39 0 2226 132 33 33 chr2 21677281 21677705 -231578878 - L1MA7 LINE L1 -4 6287 5864 245 294 88 69 chr2 21678197 21678357 -231578226 + MER5A DNA MER1_type 2 164 -25 875 218 6 35 chr2 21678397 21678567 -231578016 - MER5A DNA MER1_type -10 179 15 225 313 0 18 chr2 21678849 21678961 -231577622 + MARNA DNA Mariner 400 509 -77 842 209 0 23 chr2 21679008 21679185 -231577398 - MER97c DNA MER1_type? -915 175 3 183 200 0 0 chr2 21679280 21679315 -231577268 - L3b LINE CR1 -127 1456 1422 415 242 177 27 chr2 21680004 21680190 -231576393 - MLT1H LTR MaLR 0 549 336 808 249 9 24 chr2 21680246 21680459 -231576124 - MLT1H LTR MaLR -328 221 12 233 307 43 93 chr2 21680585 21680725 -231575858 - L2 LINE L2 -18 3254 3122 2172 113 0 0 chr2 21680812 21681103 -231575480 + AluSc SINE Alu 5 295 -14 401 354 28 11 chr2 21682018 21682196 -231574387 + MIR SINE MIR 2 182 -80 2994 133 24 43 chr2 21682212 21682792 -231573791 + LTR24B LTR ERV1 1 569 -7 244 191 0 0 chr2 21682796 21682838 -231573745 + MIR SINE MIR 210 251 -11 323 292 47 68 chr2 21683699 21683891 -231572692 - MER5A DNA MER1_type -1 188 1 2263 205 16 24 chr2 21683908 21684396 -231572187 - LTR42 LTR ERVL -18 477 3 234 0 0 0 chr2 21685303 21685329 -231571254 + (T)n Simple_repeat Simple_repeat 1 26 0 2199 120 0 0 chr2 21686925 21687217 -231569366 + AluSc SINE Alu 1 292 -17 304 298 0 0 chr2 21688256 21688340 -231568243 - MIR SINE MIR -84 178 95 22 56 0 0 chr2 21688918 21688954 -231567629 + AT_rich Low_complexity Low_complexity 1 36 0 669 287 19 3 chr2 21688960 21689281 -231567302 + L1MC/D LINE L1 4378 4703 -1443 1027 168 59 49 chr2 21689331 21689617 -231566966 - MER33 DNA MER1_type 0 324 36 711 284 65 64 chr2 21689639 21690338 -231566245 + L1MC/D LINE L1 4745 5447 -761 6789 65 38 9 chr2 21690338 21691519 -231565064 - L1PA8 LINE L1 -13 6159 4968 711 284 65 64 chr2 21691519 21691714 -231564869 + L1MC/D LINE L1 5447 5640 -568 894 142 0 0 chr2 21691842 21691969 -231564614 - AluSq/x SINE Alu -185 127 1 364 123 0 0 chr2 21692011 21692076 -231564507 - L1MB7 LINE L1 -8 6176 6112 2304 110 0 3 chr2 21692076 21692386 -231564197 + AluSx SINE Alu 1 309 -3 1795 180 13 124 chr2 21692431 21692719 -231563864 - LTR42 LTR ERVL -2 493 275 1467 97 65 5 chr2 21692719 21692936 -231563647 + MER30 DNA MER1_type 1 230 0 1795 180 13 124 chr2 21692936 21693113 -231563470 - LTR42 LTR ERVL -220 275 80 2533 209 39 37 chr2 21693154 21693350 -231563233 - L1MB7 LINE L1 -142 6042 5848 1633 173 7 17 chr2 21693350 21693651 -231562932 + AluJb SINE Alu 1 298 -14 2533 209 39 37 chr2 21693651 21693886 -231562697 - L1MB7 LINE L1 -336 5848 5615 2209 124 25 25 chr2 21693886 21694250 -231562333 - THE1B LTR MaLR 0 364 1 2533 209 39 37 chr2 21694250 21694488 -231562095 - L1MB7 LINE L1 -569 5615 5371 250 204 32 21 chr2 21694542 21694635 -231561948 + (TA)n Simple_repeat Simple_repeat 1 94 0 23 0 0 0 chr2 21694908 21694931 -231561652 + AT_rich Low_complexity Low_complexity 1 23 0 2279 147 12 20 chr2 21695052 21695460 -231561123 - MER65A LTR ERV1 -1 444 40 254 61 82 20 chr2 21695486 21695535 -231561048 - MER65A LTR ERV1 -391 54 3 223 376 47 0 chr2 21696028 21696113 -231560470 + L2 LINE L2 3141 3229 -43 186 275 143 11 chr2 21696151 21696242 -231560341 + L2 LINE L2 2566 2668 -646 245 358 57 24 chr2 21696268 21696391 -231560192 + L2 LINE L2 3141 3267 -5 308 279 72 90 chr2 21696533 21696755 -231559828 - MLT1I LTR MaLR -107 302 85 266 269 25 109 chr2 21696848 21696967 -231559616 - L2 LINE L2 -521 2793 2685 468 314 78 30 chr2 21697057 21697472 -231559111 + L1ME3A LINE L1 4805 5239 -907 2655 187 32 5 chr2 21697483 21698049 -231558534 + L1MB5 LINE L1 5583 6163 -11 1041 290 63 28 chr2 21698111 21698794 -231557789 + L1ME3A LINE L1 5237 5947 -219 545 115 39 10 chr2 21698794 21698898 -231557685 + L1MA7 LINE L1 6180 6286 -5 1497 210 144 87 chr2 21699292 21699516 -231557067 + MLT1E1 LTR MaLR 1 211 -443 2003 150 18 29 chr2 21699516 21699857 -231556726 + MER1B DNA MER1_type 1 337 0 1497 210 144 87 chr2 21699857 21700241 -231556342 + MLT1E1 LTR MaLR 211 644 -10 1516 175 25 39 chr2 21700336 21700621 -231555962 + AluJb SINE Alu 1 281 -31 317 256 73 0 chr2 21700623 21700705 -231555878 + L1MC4 LINE L1 6616 6703 -1339 198 0 0 0 chr2 21701167 21701189 -231555394 + (TAAAAA)n Simple_repeat Simple_repeat 2 23 0 462 293 45 37 chr2 21701235 21701481 -231555102 - L1MEd LINE L1 -4892 1227 980 23 0 0 0 chr2 21701725 21701748 -231554835 + AT_rich Low_complexity Low_complexity 1 23 0 3761 121 27 0 chr2 21702132 21702718 -231553865 - LTR43 LTR ERV1 0 602 1 24 32 0 0 chr2 21702970 21703001 -231553582 + AT_rich Low_complexity Low_complexity 1 31 0 28 29 0 0 chr2 21703094 21703129 -231553454 + AT_rich Low_complexity Low_complexity 1 35 0 15520 127 16 9 chr2 21703162 21703842 -231552741 - Tigger1 DNA MER2_type 0 2418 1744 2290 74 3 6 chr2 21703842 21704153 -231552430 - L1PA10 LINE L1 -6 6162 5853 15520 127 16 9 chr2 21704153 21705874 -231550709 - Tigger1 DNA MER2_type -674 1744 1 4150 134 9 76 chr2 21707352 21707547 -231549036 - L1MA9 LINE L1 -5 6307 6101 2640 55 0 0 chr2 21707547 21707858 -231548725 + AluY SINE Alu 1 311 0 4150 134 9 76 chr2 21707858 21708513 -231548070 - L1MA9 LINE L1 -211 6101 5514 1489 256 85 60 chr2 21708630 21708889 -231547694 - L1ME3A LINE L1 -78 6084 5833 7558 27 9 0 chr2 21708889 21710076 -231546507 - L1PA4 LINE L1 0 6155 4964 1489 256 85 60 chr2 21710076 21710616 -231545967 - L1ME3A LINE L1 -329 5833 5265 950 298 91 19 chr2 21710672 21711528 -231545055 - L1ME3A LINE L1 -955 5191 4274 328 273 87 40 chr2 21711541 21711646 -231544937 - L1ME3A LINE L1 -1922 4224 4108 1783 191 0 3 chr2 21711646 21711955 -231544628 + AluJb SINE Alu 1 308 -4 328 273 87 40 chr2 21711955 21711999 -231544584 - L1ME3A LINE L1 -2038 4108 4068 2096 162 0 20 chr2 21712039 21712384 -231544199 + MER7A DNA MER2_type 11 346 0 392 170 10 70 chr2 21712405 21712537 -231544046 - L1 LINE L1 -2165 3981 3856 6944 60 22 0 chr2 21712742 21713688 -231542895 - L1PA8 LINE L1 -4 6168 5219 315 214 14 0 chr2 21714942 21715012 -231541571 + L1ME1 LINE L1 4656 4726 -1420 1210 215 73 14 chr2 21715015 21715762 -231540821 + L1ME1 LINE L1 4791 5599 -567 1984 148 0 6 chr2 21715769 21716080 -231540503 + AluSx SINE Alu 1 309 -3 1395 195 0 28 chr2 21716087 21716369 -231540214 + AluJo SINE Alu 39 312 0 1478 239 33 32 chr2 21716373 21716842 -231539741 + L1ME1 LINE L1 5599 6021 -145 214 345 50 0 chr2 21717055 21717174 -231539409 + MIR SINE MIR 138 262 0 1980 153 10 61 chr2 21717277 21717688 -231538895 + MLT1B LTR MaLR 1 390 0 4368 56 0 5 chr2 21719014 21719565 -231537018 - L1PA7 LINE L1 0 6154 5607 1789 181 36 12 chr2 21721703 21722039 -231534544 + MSTB1 LTR MaLR 13 356 -76 22 0 0 0 chr2 21722108 21722130 -231534453 + AT_rich Low_complexity Low_complexity 1 22 0 1910 190 30 13 chr2 21722143 21722538 -231534045 + MER65A LTR ERV1 44 445 0 1703 230 18 53 chr2 21722561 21723336 -231533247 + MER65A-int LTR ERV1 29 942 -4050 2140 202 63 35 chr2 21723769 21724479 -231532104 + MER65A-int LTR ERV1 1096 1811 -3060 233 189 0 0 chr2 21724479 21724516 -231532067 - Alu SINE Alu -265 37 1 956 204 75 88 chr2 21724609 21725169 -231531414 + MER65A-int LTR ERV1 1720 3475 -3123 22 0 0 0 chr2 21725259 21725281 -231531302 + AT_rich Low_complexity Low_complexity 1 22 0 662 172 15 130 chr2 21725482 21725692 -231530891 + MER65A-int LTR ERV1 3499 3675 -2923 2209 96 10 7 chr2 21725692 21725858 -231530725 - AluSq SINE Alu -11 302 133 198 0 0 0 chr2 21725858 21725880 -231530703 + (TTA)n Simple_repeat Simple_repeat 2 23 0 2209 96 10 7 chr2 21725880 21726014 -231530569 - AluSq SINE Alu -180 133 1 662 172 15 130 chr2 21726014 21726065 -231530518 + MER65A-int LTR ERV1 3675 3730 -2868 2079 209 78 84 chr2 21726141 21727469 -231529114 + MER65A-int LTR ERV1 3735 5094 -1237 2341 238 61 0 chr2 21727649 21728144 -231528439 + MER65A-int LTR ERV1 3604 4128 -743 1780 232 32 44 chr2 21728142 21728752 -231527831 + MER65A-int LTR ERV1 4231 4871 0 * 2267 147 34 27 chr2 21728752 21729194 -231527389 + MER65A LTR ERV1 1 445 0 316 317 6 82 chr2 21729623 21729806 -231526777 - L1 LINE L1 -1100 5046 4878 1289 274 73 52 chr2 21729870 21731261 -231525322 - L1 LINE L1 -1537 4609 3190 1684 189 3 16 chr2 21731316 21731623 -231524960 + AluJb SINE Alu 3 305 -7 1905 197 43 49 chr2 21731832 21732340 -231524243 - MLT1D LTR MaLR 0 505 1 314 315 114 22 chr2 21732631 21732874 -231523709 - L1MEd LINE L1 -868 1622 1334 281 226 65 21 chr2 21732942 21733035 -231523548 - L1MEd LINE L1 -4862 1257 1161 26 50 0 0 chr2 21733138 21733178 -231523405 + AT_rich Low_complexity Low_complexity 1 40 0 320 344 100 39 chr2 21733473 21733732 -231522851 - L1MEd LINE L1 -5571 548 274 2465 187 6 17 chr2 21733784 21734266 -231522317 + L1MB4 LINE L1 5656 6132 -48 28 0 0 0 chr2 21736943 21736971 -231519612 + AT_rich Low_complexity Low_complexity 1 28 0 41482 56 8 1 chr2 21736971 21743060 -231513523 - L1PA5 LINE L1 -8 6146 11 2165 100 7 7 chr2 21743742 21744042 -231512541 - AluSq SINE Alu -12 301 2 263 293 46 46 chr2 21744099 21744246 -231512337 - MIR SINE MIR -23 185 26 253 313 38 0 chr2 21744216 21744296 -231512287 - MIR SINE MIR -116 146 64 * 2844 227 35 29 chr2 21744705 21745552 -231511031 - L1ME1 LINE L1 -50 6376 5546 2906 239 93 15 chr2 21745631 21746567 -231510016 - L1ME1 LINE L1 -874 5532 4505 210 71 0 0 chr2 21746567 21746595 -231509988 + (TG)n Simple_repeat Simple_repeat 1 28 0 2906 239 93 15 chr2 21746595 21746704 -231509879 - L1ME1 LINE L1 -1901 4505 4406 237 213 25 25 chr2 21746704 21746826 -231509757 + CT-rich Low_complexity Low_complexity 3 124 0 272 167 44 56 chr2 21746862 21746952 -231509631 - L1M LINE L1 -752 5414 5329 681 221 22 31 chr2 21746966 21747131 -231509452 - L1ME1 LINE L1 -1976 4430 4266 198 0 0 0 chr2 21747131 21747153 -231509430 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 681 221 22 31 chr2 21747153 21747209 -231509374 - L1ME1 LINE L1 -2140 4266 4211 826 191 0 0 chr2 21747226 21747367 -231509216 - FRAM SINE Alu -36 140 1 3859 260 39 26 chr2 21747367 21749108 -231507475 - L1ME1 LINE L1 -2185 4221 2459 345 206 149 37 chr2 21749113 21749220 -231507363 - L1ME1 LINE L1 -5051 1358 1240 1234 295 66 43 chr2 21749247 21749410 -231507173 - L1M4c LINE L1 -4075 3063 2905 2218 81 0 14 chr2 21749410 21749714 -231506869 - AluY SINE Alu 0 300 1 1234 295 66 43 chr2 21749714 21750655 -231505928 - L1M4c LINE L1 -4233 2905 1987 1719 143 175 24 chr2 21750655 21751027 -231505556 + MSTA LTR MaLR 1 428 0 8430 153 25 42 chr2 21751029 21752635 -231503948 + MSTA-int LTR MaLR 3 1580 0 1535 176 213 0 chr2 21752635 21752808 -231503775 + MSTA LTR MaLR 1 136 -292 183 42 0 0 chr2 21752808 21752832 -231503751 + (TC)n Simple_repeat Simple_repeat 2 25 0 1535 176 213 0 chr2 21752832 21753011 -231503572 + MSTA LTR MaLR 136 428 0 1234 295 66 43 chr2 21753011 21753399 -231503184 - L1M4c LINE L1 -5150 1988 1390 1894 138 23 129 chr2 21753399 21753878 -231502705 - MSTA LTR MaLR 0 428 1 5743 192 30 14 chr2 21753878 21754921 -231501662 + L1 LINE L1 3359 4384 -1762 1951 162 13 0 chr2 21754921 21755224 -231501359 + AluSx SINE Alu 1 307 -5 5743 192 30 14 chr2 21755224 21755311 -231501272 + L1 LINE L1 4384 4468 -1678 195 42 0 0 chr2 21755311 21755335 -231501248 + (GAAA)n Simple_repeat Simple_repeat 2 25 0 5743 192 30 14 chr2 21755335 21755453 -231501130 + L1 LINE L1 4468 4628 -1518 21 57 0 0 chr2 21755607 21755642 -231500941 + AT_rich Low_complexity Low_complexity 1 35 0 230 232 184 68 chr2 21756157 21756347 -231500236 - L1M4c LINE L1 -6256 599 388 1815 172 17 0 chr2 21757254 21757556 -231499027 - AluSx SINE Alu -1 311 5 431 331 57 0 chr2 21758372 21758496 -231498087 + L2 LINE L2 3142 3272 0 1473 205 13 13 chr2 21758788 21759091 -231497492 + AluJo SINE Alu 1 303 -9 236 274 167 0 chr2 21759251 21759335 -231497248 - L2 LINE L2 -2 3270 3173 348 64 0 0 chr2 21763686 21763733 -231492850 + (TG)n Simple_repeat Simple_repeat 2 48 0 216 182 0 0 chr2 21763733 21763777 -231492806 + (TA)n Simple_repeat Simple_repeat 2 45 0 329 311 36 51 chr2 21763883 21764082 -231492501 - MIR3 SINE MIR -50 158 18 907 304 51 27 chr2 21767045 21767381 -231489202 + L2 LINE L2 2952 3295 -18 342 0 0 0 chr2 21768132 21768170 -231488413 + (CA)n Simple_repeat Simple_repeat 2 39 0 703 183 84 0 chr2 21769498 21769640 -231486943 - MER105 DNA DNA -47 157 4 457 336 0 0 chr2 21769640 21769782 -231486801 + MLT1J1 LTR MaLR 11 152 -294 350 370 37 12 chr2 21769839 21769916 -231486667 + MLT1J2 LTR MaLR 244 318 -132 2256 130 19 30 chr2 21769916 21770284 -231486299 + THE1B LTR MaLR 1 364 0 350 370 37 12 chr2 21770284 21770368 -231486215 + MLT1J2 LTR MaLR 318 409 -41 462 288 21 78 chr2 21770833 21770964 -231485619 + MER5A DNA MER1_type 4 122 -67 2548 65 0 0 chr2 21770964 21771272 -231485311 - AluY SINE Alu -3 308 1 462 288 21 78 chr2 21771272 21771331 -231485252 + MER5A DNA MER1_type 122 183 -6 516 319 125 0 chr2 21772253 21772469 -231484114 + MIR SINE MIR 8 250 -12 470 189 100 0 chr2 21773969 21774059 -231482524 + MLT1E LTR MaLR 1 99 -494 848 198 12 12 chr2 21774064 21774231 -231482352 - FRAM SINE Alu -9 167 1 1218 216 25 85 chr2 21774327 21774692 -231481891 + MLT1E1 LTR MaLR 312 654 0 236 215 103 75 chr2 21774827 21774934 -231481649 - MIR SINE MIR -27 235 126 362 326 15 22 chr2 21774934 21775069 -231481514 - MIR SINE MIR -109 153 20 257 175 140 18 chr2 21775274 21775331 -231481252 - L2 LINE L2 -11 3302 3239 445 254 138 14 chr2 21776337 21776475 -231480108 - MER5A DNA MER1_type -3 186 32 2044 227 85 58 chr2 21776749 21777746 -231478837 - L1MC5 LINE L1 -44 7917 6894 191 61 30 0 chr2 21777765 21777798 -231478785 + (TTTTTG)n Simple_repeat Simple_repeat 4 37 0 297 276 127 22 chr2 21777953 21778087 -231478496 - L2 LINE L2 -1023 2291 2144 233 317 48 29 chr2 21778339 21778443 -231478140 - MIR SINE MIR -155 107 2 3709 147 30 3 chr2 21778985 21779650 -231476933 + L1MA5A LINE L1 5615 6297 0 342 0 0 0 chr2 21779898 21779936 -231476647 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 480 306 27 7 chr2 21782270 21782417 -231474166 + MIR3 SINE MIR 54 203 -5 370 171 34 0 chr2 21782676 21782764 -231473819 + GA-rich Low_complexity Low_complexity 2 92 0 2038 75 32 0 chr2 21782812 21783090 -231473493 + L1PA8 LINE L1 5886 6172 0 186 191 0 0 chr2 21783327 21783369 -231473214 + CT-rich Low_complexity Low_complexity 3 44 0 290 219 27 41 chr2 21784174 21784247 -231472336 + MER112 DNA MER1_type 178 249 -11 240 286 76 76 chr2 21784454 21784664 -231471919 + MLT1K LTR MaLR 293 502 -86 6054 187 94 102 chr2 21784763 21786943 -231469640 - L1MCa LINE L1 -4241 2185 22 419 315 41 20 chr2 21787017 21787163 -231469420 - MIR SINE MIR -95 167 19 372 284 169 11 chr2 21788122 21788305 -231468278 + L2 LINE L2 3102 3313 0 539 92 0 0 chr2 21788683 21788759 -231467824 + AluSc SINE Alu 226 301 -8 1608 187 0 31 chr2 21792231 21792550 -231464033 - AluJo SINE Alu 0 310 1 2219 110 0 7 chr2 21792852 21793160 -231463423 + AluSc SINE Alu 1 306 -3 892 275 13 8 chr2 21794425 21794661 -231461922 + MIR SINE MIR 1 237 -25 263 281 219 10 chr2 21794931 21795123 -231461460 + LTR33A LTR ERVL 292 523 0 279 79 0 0 chr2 21798097 21798135 -231458448 + (TTC)n Simple_repeat Simple_repeat 1 38 0 6204 77 16 8 chr2 21798135 21799816 -231456767 - L1PA7 LINE L1 -26 6128 4441 * 6848 99 4 30 chr2 21799808 21800413 -231456170 + L1P LINE L1 1672 2292 -3854 1593 117 0 0 chr2 21800413 21800626 -231455957 + AluSc SINE Alu 71 283 -26 6848 99 4 30 chr2 21800626 21800639 -231455944 + L1P LINE L1 2292 2304 -3842 188 35 35 0 chr2 21800639 21800668 -231455915 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 6848 99 4 30 chr2 21800668 21801172 -231455411 + L1P LINE L1 2304 2765 -3381 268 327 128 29 chr2 21801177 21801458 -231455125 - L2 LINE L2 -962 2352 2044 191 333 51 0 chr2 21801466 21801583 -231455000 - L2 LINE L2 -1508 1806 1684 310 293 140 57 chr2 21801906 21802135 -231454448 - L2 LINE L2 -42 3230 2983 458 255 28 28 chr2 21802268 21802413 -231454170 - MER58B DNA MER1_type -1 340 196 1505 222 59 61 chr2 21802415 21803041 -231453542 + MER92B LTR ERV1 1 625 -11 979 183 59 0 chr2 21803062 21803248 -231453335 - MER58B DNA MER1_type -144 197 1 414 307 9 9 chr2 21803296 21803410 -231453173 - L2 LINE L2 -1 3312 3199 338 43 0 0 chr2 21803426 21803472 -231453111 + MADE1 DNA Mariner 35 80 0 316 360 25 5 chr2 21803637 21803837 -231452746 - MARNA DNA Mariner -100 486 283 1117 217 33 79 chr2 21803939 21804280 -231452303 + MLT1A2 LTR MaLR 1 323 -51 2246 89 0 7 chr2 21804280 21804573 -231452010 + AluY SINE Alu 1 291 -20 1117 217 33 79 chr2 21804573 21804623 -231451960 + MLT1A2 LTR MaLR 323 374 0 198 349 79 16 chr2 21805483 21805609 -231450974 - L2 LINE L2 -1 3271 3138 491 241 55 65 chr2 21806435 21806634 -231449949 - MIR3 SINE MIR -7 201 5 213 227 213 85 chr2 21806793 21806934 -231449649 + L2 LINE L2 3150 3308 -5 186 327 75 19 chr2 21807224 21807331 -231449252 - L2 LINE L2 0 3313 3201 401 277 76 113 chr2 21808500 21808854 -231447729 - L3 LINE CR1 -177 1400 1060 29 78 0 0 chr2 21811543 21811607 -231444976 + AT_rich Low_complexity Low_complexity 1 64 0 363 290 0 23 chr2 21811754 21811794 -231444789 + (TA)n Simple_repeat Simple_repeat 2 41 -88 279 0 0 0 chr2 21811794 21811825 -231444758 + (CA)n Simple_repeat Simple_repeat 2 32 0 2387 114 39 3 chr2 21811825 21812184 -231444399 + THE1C LTR MaLR 2 373 -2 363 290 0 23 chr2 21812184 21812273 -231444310 + (TA)n Simple_repeat Simple_repeat 39 129 0 7009 114 11 7 chr2 21812300 21812987 -231443596 - L1PA8 LINE L1 -3 6169 5486 2340 84 3 3 chr2 21812987 21813284 -231443299 - AluY SINE Alu -14 297 1 7009 114 11 7 chr2 21813284 21814494 -231442089 - L1PA8 LINE L1 -686 5486 4278 215 244 0 0 chr2 21814878 21814919 -231441664 + L2 LINE L2 3219 3259 -13 282 358 29 7 chr2 21816936 21817073 -231439510 + L3 LINE CR1 651 790 -787 581 320 24 10 chr2 21817084 21817290 -231439293 - MIR SINE MIR -11 251 43 215 360 174 21 chr2 21817393 21817635 -231438948 + L3 LINE CR1 900 1178 -399 375 290 30 38 chr2 21817775 21817906 -231438677 - L2 LINE L2 -1 3271 3142 2055 169 6 0 chr2 21817944 21818288 -231438295 - MER7A DNA MER2_type -1 345 2 469 320 63 80 chr2 21818353 21818718 -231437865 + L3 LINE CR1 1204 1562 -15 184 281 31 31 chr2 21819234 21819298 -231437285 + MIR3 SINE MIR 97 160 -48 288 349 54 8 chr2 21819338 21819467 -231437116 - MER5B DNA MER1_type -37 141 7 267 297 0 0 chr2 21819462 21819526 -231437057 + MIR3 SINE MIR 145 208 0 * 252 0 0 0 chr2 21819555 21819583 -231437000 + (CA)n Simple_repeat Simple_repeat 2 29 0 243 0 0 0 chr2 21819589 21819616 -231436967 + (TG)n Simple_repeat Simple_repeat 2 28 0 1833 177 19 8 chr2 21821292 21821696 -231434887 - MLT2B2 LTR ERVL -64 456 1 289 281 167 9 chr2 21821867 21821981 -231434602 - MIR SINE MIR -82 180 49 807 287 113 29 chr2 21823545 21824030 -231432553 - MLT1H1 LTR MaLR 0 555 30 221 274 14 0 chr2 21824970 21825043 -231431540 + (TA)n Simple_repeat Simple_repeat 2 75 0 236 263 132 13 chr2 21825504 21825580 -231431003 + MIR SINE MIR 96 180 -82 734 190 65 13 chr2 21826571 21826816 -231429767 + MER33 DNA MER1_type 1 255 -69 19274 159 20 14 chr2 21826816 21834449 -231422134 - L1MA1 LINE L1 -11 7710 16 524 117 21 0 chr2 21834455 21834549 -231422034 + MER33 DNA MER1_type 256 351 -12 498 348 52 4 chr2 21835652 21835885 -231420698 + MIR SINE MIR 18 261 -1 801 271 105 56 chr2 21835935 21836345 -231420238 - LTR16A LTR ERVL 0 450 21 961 273 164 25 chr2 21837141 21837702 -231418881 - HAL1 LINE L1 -21 2486 1849 283 29 0 0 chr2 21837704 21837739 -231418844 + (TTTTG)n Simple_repeat Simple_repeat 1 70 0 865 181 0 0 chr2 21837739 21837883 -231418700 - AluSc SINE Alu -31 278 135 739 240 20 15 chr2 21837958 21838154 -231418429 - HAL1 LINE L1 -739 1768 1572 382 311 89 26 chr2 21838155 21838425 -231418158 - HAL1 LINE L1 -2208 299 13 433 289 107 75 chr2 21838429 21839189 -231417394 - HAL1 LINE L1 -947 1560 777 264 306 0 0 chr2 21839257 21839319 -231417264 - HAL1 LINE L1 -1859 648 587 821 304 68 42 chr2 21839360 21839814 -231416769 - HAL1 LINE L1 -2029 478 13 346 335 83 53 chr2 21840755 21840971 -231415612 - L3 LINE CR1 -128 1449 1241 2902 87 16 3 chr2 21840971 21841337 -231415246 - THE1C LTR MaLR -3 372 2 346 335 83 53 chr2 21841337 21841588 -231414995 - L3 LINE CR1 -336 1241 968 4670 36 0 0 chr2 21841730 21842257 -231414326 - L1PA4 LINE L1 0 6155 5629 1254 56 6 0 chr2 21842257 21842419 -231414164 + L1P LINE L1 3830 3992 -2154 211 282 97 57 chr2 21843130 21843254 -231413329 - MIR SINE MIR -68 194 66 2239 105 23 0 chr2 21843277 21843615 -231412968 - AluSq SINE Alu 0 345 1 290 282 22 74 chr2 21845050 21845198 -231411385 - MIR3 SINE MIR -90 118 10 24 0 0 0 chr2 21845304 21845328 -231411255 + AT_rich Low_complexity Low_complexity 1 24 0 831 252 58 13 chr2 21846161 21846387 -231410196 - MIR SINE MIR -26 236 1 664 284 39 10 chr2 21847835 21848043 -231408540 - MIR SINE MIR -12 250 37 339 164 82 8 chr2 21848414 21848536 -231408047 + (TA)n Simple_repeat Simple_repeat 1 131 0 209 304 0 0 chr2 21848776 21848822 -231407761 + L2 LINE L2 3137 3182 -90 21 0 0 0 chr2 21849933 21849954 -231406629 + AT_rich Low_complexity Low_complexity 1 21 0 507 270 82 36 chr2 21850154 21850350 -231406233 - MIR3 SINE MIR -1 207 3 1148 229 13 4 chr2 21850625 21850852 -231405731 + MLT1A1 LTR MaLR 1 229 -136 187 355 36 18 chr2 21851126 21851236 -231405347 - L2 LINE L2 -222 3050 2939 1459 341 127 26 chr2 21851972 21853166 -231403417 + L2 LINE L2 1541 2855 -459 477 217 0 126 chr2 21853166 21853309 -231403274 + MER63 DNA MER1_type 3 753 -309 706 355 38 16 chr2 21853392 21853817 -231402766 + L2 LINE L2 2857 3290 -23 1146 276 86 46 chr2 21854353 21854831 -231401752 + LTR33 LTR ERVL 6 502 -19 211 238 88 62 chr2 21855069 21855149 -231401434 + L2 LINE L2 2532 2613 -701 2419 143 76 0 chr2 21855231 21855624 -231400959 - MSTA LTR MaLR 0 428 6 477 376 64 51 chr2 21855716 21856236 -231400347 + L2 LINE L2 2743 3267 -5 229 200 0 17 chr2 21856444 21856504 -231400079 - L1ME4a LINE L1 -103 6018 5960 2656 43 0 0 chr2 21856912 21857217 -231399366 + AluY SINE Alu 1 305 -6 245 143 0 20 chr2 21857300 21857349 -231399234 + (TG)n Simple_repeat Simple_repeat 1 48 0 216 0 0 0 chr2 21858420 21858444 -231398139 + (A)n Simple_repeat Simple_repeat 1 24 0 447 327 99 9 chr2 21858969 21859180 -231397403 + MIR SINE MIR 15 244 -18 944 222 72 19 chr2 21859907 21860114 -231396469 - MER20 DNA MER1_type 0 219 2 2131 119 3 3 chr2 21860585 21860879 -231395704 - AluSq SINE Alu -19 294 1 329 356 56 19 chr2 21863205 21863365 -231393218 + L2 LINE L2 3104 3269 -3 349 294 83 44 chr2 21865374 21865554 -231391029 + MIR3 SINE MIR 19 205 -3 233 307 34 23 chr2 21865829 21865917 -231390666 - L2 LINE L2 -45 3268 3180 191 383 0 25 chr2 21866184 21866265 -231390318 + MIR SINE MIR 19 97 -111 225 233 17 17 chr2 21867877 21867937 -231388646 + MIR3 SINE MIR 112 171 -37 209 291 37 52 chr2 21868034 21868168 -231388415 - L3b LINE CR1 -140 1443 1312 183 42 0 0 chr2 21869090 21869114 -231387469 + (A)n Simple_repeat Simple_repeat 1 24 0 21 36 0 0 chr2 21869549 21869577 -231387006 + AT_rich Low_complexity Low_complexity 1 28 0 368 261 22 22 chr2 21871173 21871265 -231385318 - MIR SINE MIR -100 108 17 183 313 102 39 chr2 21871389 21871517 -231385066 + MIR3 SINE MIR 11 146 -62 1337 150 0 33 chr2 21871935 21872148 -231384435 - AluJo SINE Alu -22 290 85 488 267 59 30 chr2 21872148 21872283 -231384300 - AluJ SINE Alu -62 250 112 695 215 0 0 chr2 21872283 21872404 -231384179 - AluJ SINE Alu -178 124 4 198 333 58 58 chr2 21873188 21873308 -231383275 + L2 LINE L2 3111 3230 -42 246 310 42 0 chr2 21873691 21873762 -231382821 + MIR SINE MIR 58 131 -131 225 0 0 0 chr2 21877368 21877393 -231379190 + (TC)n Simple_repeat Simple_repeat 2 26 0 1783 166 10 23 chr2 21877414 21877722 -231378861 + AluJb SINE Alu 3 306 -6 27 49 0 0 chr2 21877967 21878008 -231378575 + AT_rich Low_complexity Low_complexity 1 41 0 651 276 79 47 chr2 21878237 21878342 -231378241 - HAL1 LINE L1 -8 2499 2399 1852 201 174 42 chr2 21878342 21878895 -231377688 - MLT1E2 LTR MaLR 0 626 1 651 276 79 47 chr2 21878895 21879217 -231377366 - HAL1 LINE L1 -108 2399 2058 773 269 111 38 chr2 21879282 21879624 -231376959 - HAL1 LINE L1 -587 1920 1554 1230 210 105 68 chr2 21879625 21880079 -231376504 - HAL1 LINE L1 -1938 569 94 2472 170 34 12 chr2 21880079 21880496 -231376087 - MSTB LTR MaLR 0 426 1 1230 210 105 68 chr2 21880496 21880526 -231376057 - HAL1 LINE L1 -2413 94 67 1759 149 4 25 chr2 21881417 21881698 -231374885 + AluSx SINE Alu 1 275 -37 219 36 0 0 chr2 21881707 21881735 -231374848 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 540 352 40 0 chr2 21882167 21882366 -231374217 + MIR SINE MIR 48 254 -8 260 284 74 0 chr2 21883373 21883454 -231373129 + L2 LINE L2 2959 3045 -227 216 86 0 0 chr2 21884019 21884054 -231372529 + (A)n Simple_repeat Simple_repeat 1 35 0 23 33 0 0 chr2 21884696 21884726 -231371857 + AT_rich Low_complexity Low_complexity 1 30 0 186 375 106 47 chr2 21885117 21885437 -231371146 + L2 LINE L2 2890 3228 -44 635 273 53 49 chr2 21885591 21885855 -231370728 + MARNA DNA Mariner 159 423 -163 224 384 20 20 chr2 21885960 21886059 -231370524 + MIR SINE MIR 2 100 -162 375 277 7 57 chr2 21886243 21886365 -231370218 - MIR SINE MIR -118 144 28 2490 69 0 7 chr2 21886365 21886669 -231369914 - AluY SINE Alu -9 302 1 375 277 7 57 chr2 21886669 21886687 -231369896 - MIR SINE MIR -234 28 11 844 318 28 13 chr2 21887014 21887332 -231369251 + L3 LINE CR1 1254 1576 -1 251 253 72 12 chr2 21887686 21887769 -231368814 - MIR SINE MIR -66 196 109 515 215 76 38 chr2 21888356 21888514 -231368069 + L1ME3A LINE L1 5778 5941 -229 713 283 123 13 chr2 21889545 21889845 -231366738 + L2 LINE L2 2967 3299 -14 2007 301 44 11 chr2 21890905 21891547 -231365036 - MLT2F LTR ERVL 0 663 1 296 236 87 87 chr2 21891547 21891708 -231364875 - Ricksha DNA DNA -2900 346 186 1538 250 165 50 chr2 21891906 21892530 -231364053 + MER21B LTR ERV1 19 714 -149 356 0 23 0 chr2 21892548 21892592 -231363991 + (CA)n Simple_repeat Simple_repeat 2 46 0 1958 281 65 20 chr2 21892677 21893386 -231363197 - ERVL-F LTR ERVL -331 5433 4693 10325 195 73 21 chr2 21893418 21896572 -231360011 + L1MB3 LINE L1 20 3345 -3037 1913 64 0 26 chr2 21896593 21896859 -231359724 + L1PA13 LINE L1 5898 6156 -7 898 73 156 84 chr2 21896992 21897014 -231359569 + L1PA16 LINE L1 5975 5994 -172 186 43 0 0 chr2 21897014 21897037 -231359546 + (GGGA)n Simple_repeat Simple_repeat 1 23 0 898 73 156 84 chr2 21897037 21897193 -231359390 + L1PA16 LINE L1 5994 6166 0 * 1774 229 71 4 chr2 21897190 21897727 -231358856 + L1MB3 LINE L1 3427 3999 -2383 5941 211 34 16 chr2 21947727 21950110 -231306473 + L1MB3 LINE L1 3994 6417 -2 795 271 84 16 chr2 21950124 21950375 -231306208 - ERVL-F LTR ERVL -1121 4643 4376 * 3038 243 34 3 chr2 21950366 21951040 -231305543 - ERVL-F LTR ERVL -2231 3533 2839 412 281 146 12 chr2 21951055 21951219 -231305364 - MIR SINE MIR -3 259 74 5029 291 45 11 chr2 21951335 21953136 -231303447 - ERVL-F LTR ERVL -2996 2768 853 1770 162 11 43 chr2 21953249 21953620 -231302963 - L1MB8 LINE L1 -200 5978 5620 275 285 114 32 chr2 21953636 21953794 -231302789 - MIR3 SINE MIR -37 171 1 537 321 146 36 chr2 21956208 21956775 -231299808 - L2 LINE L2 -191 3081 2455 2249 106 26 32 chr2 21956776 21957153 -231299430 + THE1C LTR MaLR 1 375 0 24 53 0 0 chr2 21957164 21957202 -231299381 + AT_rich Low_complexity Low_complexity 1 38 0 1935 116 7 27 chr2 21957699 21958017 -231298566 + AluSx SINE Alu 1 312 0 336 329 91 30 chr2 21959069 21959300 -231297283 - L3 LINE CR1 -673 904 660 232 179 80 86 chr2 21959305 21959456 -231297127 + MER113 DNA MER1_type? 4 153 -368 237 132 0 0 chr2 21961024 21961062 -231295521 + (TAG)n Simple_repeat Simple_repeat 1 38 0 305 250 79 0 chr2 21961257 21961333 -231295250 - MIR SINE MIR -70 192 111 234 315 130 12 chr2 21963267 21963428 -231293155 + MIR SINE MIR 60 238 -24 993 114 13 0 chr2 21964545 21964694 -231291889 - L1PA11 LINE L1 -11 6163 6013 1051 313 67 38 chr2 21964733 21965152 -231291431 + LTR16A LTR ERVL 23 446 -4 223 214 0 18 chr2 21965693 21965749 -231290834 + (TA)n Simple_repeat Simple_repeat 1 55 0 382 267 75 107 chr2 21965785 21966160 -231290423 + L1ME4a LINE L1 5602 5964 -157 245 279 0 0 chr2 21966162 21966230 -231290353 + (TA)n Simple_repeat Simple_repeat 1 68 0 338 231 51 0 chr2 21966236 21966314 -231290269 - L1MC4 LINE L1 -1347 6695 6614 333 311 0 0 chr2 21966250 21966340 -231290243 + L1MC4 LINE L1 6614 6703 -1339 * 311 301 0 0 chr2 21966354 21966437 -231290146 - L1MC4 LINE L1 -1346 6696 6614 183 80 0 0 chr2 21966437 21966462 -231290121 + (TA)n Simple_repeat Simple_repeat 1 25 0 283 216 104 40 chr2 21966462 21966587 -231289996 + L1ME4a LINE L1 5935 6067 -54 378 340 102 48 chr2 21966591 21967259 -231289324 + L2 LINE L2 961 1664 -1650 469 284 13 23 chr2 21967650 21967927 -231288656 - L1MC4 LINE L1 -339 5831 5644 1454 226 25 67 chr2 21968437 21968871 -231287712 + LTR52 LTR ERVL 6 421 0 23 0 0 0 chr2 21969062 21969085 -231287498 + AT_rich Low_complexity Low_complexity 1 23 0 1499 190 36 30 chr2 21969349 21969712 -231286871 + MLT1A1 LTR MaLR 1 365 0 1148 58 0 0 chr2 21970013 21970152 -231286431 - MER85 DNA T2_type 0 139 1 426 307 93 42 chr2 21970881 21971096 -231285487 + MIR SINE MIR 3 228 -34 1287 138 55 0 chr2 21972596 21972814 -231283769 + MER30 DNA MER1_type 1 230 0 1724 162 76 15 chr2 21972902 21973296 -231283287 + L1MB7 LINE L1 5743 6160 -24 525 292 0 0 chr2 21974316 21974453 -231282130 - MIR SINE MIR -45 217 81 253 344 131 55 chr2 21975254 21975675 -231280908 - L2 LINE L2 -431 2883 2431 199 326 114 38 chr2 21976382 21976451 -231280132 + L2 LINE L2 2392 2454 -860 2115 125 90 0 chr2 21976451 21976795 -231279788 - THE1C LTR MaLR 0 375 1 199 326 114 38 chr2 21976795 21976961 -231279622 + L2 LINE L2 2454 2645 -669 229 302 47 35 chr2 21977005 21977091 -231279492 - L2 LINE L2 -37 3276 3190 205 310 81 0 chr2 21977498 21977585 -231278998 - L2 LINE L2 -748 2566 2473 1563 178 20 10 chr2 21978061 21978359 -231278224 + MER2 DNA MER2_type 32 332 -13 27 0 0 0 chr2 21978729 21978756 -231277827 + AT_rich Low_complexity Low_complexity 1 27 0 263 347 76 31 chr2 21978773 21979064 -231277519 - L1MC/D LINE L1 -2001 5790 5487 464 336 67 34 chr2 21979419 21979913 -231276670 - L1MC/D LINE L1 -3387 2742 2233 251 296 6 62 chr2 21980011 21980173 -231276410 - L1MC/D LINE L1 -5005 1114 962 815 161 0 7 chr2 21980547 21980684 -231275899 - FRAM SINE Alu -10 166 31 204 277 0 21 chr2 21981587 21981634 -231274949 - MIR3 SINE MIR -20 188 143 885 317 35 0 chr2 21982673 21982957 -231273626 - LTR33 LTR ERVL -222 299 6 239 269 50 50 chr2 21983193 21983312 -231273271 - MIR SINE MIR -131 131 13 205 65 32 0 chr2 21983755 21983786 -231272797 + L2 LINE L2 1380 1411 -1903 192 250 0 21 chr2 21983888 21983936 -231272647 - L2 LINE L2 -8 3264 3218 225 305 29 29 chr2 21984838 21984943 -231271640 + MIR SINE MIR 75 179 -83 190 306 82 41 chr2 21985519 21985617 -231270966 + MIR SINE MIR 7 108 -154 696 306 119 25 chr2 21986681 21987041 -231269542 - LTR16C LTR ERVL 0 491 98 404 309 101 39 chr2 21987510 21987717 -231268866 + MIR SINE MIR 29 248 -14 234 0 0 0 chr2 21987729 21987755 -231268828 + (CAT)n Simple_repeat Simple_repeat 3 28 0 1173 166 76 0 chr2 21987988 21988199 -231268384 - MER30 DNA MER1_type 0 230 4 206 289 52 31 chr2 21988728 21988825 -231267758 + MIR SINE MIR 1 99 -163 458 296 32 0 chr2 21988847 21988972 -231267611 + L2 LINE L2 3182 3310 -3 186 208 0 21 chr2 21988970 21989018 -231267565 + MIR SINE MIR 93 139 -69 * 325 318 32 0 chr2 21989631 21989757 -231266826 + MIR SINE MIR 120 249 -13 246 324 193 14 chr2 21990596 21990741 -231265842 - L2 LINE L2 -87 3185 3015 221 171 0 0 chr2 21991467 21991508 -231265075 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 188 194 0 0 chr2 21991763 21991794 -231264789 + L2 LINE L2 3265 3295 -18 415 269 81 27 chr2 21995824 21995973 -231260610 - L3 LINE CR1 -14 1563 1407 988 247 93 0 chr2 21998620 21998657 -231257926 - MER33 DNA MER1_type -2265 320 288 1165 126 10 20 chr2 21998657 21998855 -231257728 + L1PA14 LINE L1 5964 6159 -2 988 247 93 0 chr2 21998855 21999119 -231257464 - MER33 DNA MER1_type -2297 288 1 1959 143 18 47 chr2 21999135 21999521 -231257062 - THE1C LTR MaLR 0 375 1 21 57 0 0 chr2 22000468 22000503 -231256080 + AT_rich Low_complexity Low_complexity 1 35 0 437 177 0 0 chr2 22000646 22000725 -231255858 - L1P LINE L1 -905 5241 5163 3059 82 58 16 chr2 22000725 22001176 -231255407 + L1PA10 LINE L1 5683 6152 -16 273 257 46 46 chr2 22001983 22002092 -231254491 + MER103 DNA DNA 1 109 -57 409 256 0 0 chr2 22002816 22002906 -231253677 + L3 LINE CR1 480 569 -1008 387 0 0 0 chr2 22003180 22003223 -231253360 + (TG)n Simple_repeat Simple_repeat 1 43 0 1285 246 62 10 chr2 22003576 22003962 -231252621 + L1ME LINE L1 5397 5802 -319 942 227 63 54 chr2 22004024 22004465 -231252118 + L1MC5 LINE L1 7502 7946 -15 208 237 85 76 chr2 22005284 22005402 -231251181 + MIR SINE MIR 105 223 -39 197 207 0 17 chr2 22005433 22005491 -231251092 + CT-rich Low_complexity Low_complexity 1 57 0 22 35 0 0 chr2 22005690 22005719 -231250864 + AT_rich Low_complexity Low_complexity 1 29 0 210 37 0 0 chr2 22007871 22007898 -231248685 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1917 130 14 4 chr2 22007912 22008189 -231248394 - AluSx SINE Alu -30 282 3 4535 190 30 1 chr2 22008408 22009504 -231247079 - L1P4 LINE L1 -684 5482 4356 923 206 0 0 chr2 22009503 22009678 -231246905 - L1P4 LINE L1 -2341 3805 3631 * 329 310 173 28 chr2 22010235 22010519 -231246064 - MLT1H LTR MaLR -16 533 209 305 232 61 12 chr2 22010566 22010648 -231245935 + L1 LINE L1 3072 3157 -2989 1863 155 13 7 chr2 22010715 22011019 -231245564 - AluJb SINE Alu -6 306 1 1323 188 25 43 chr2 22011938 22012173 -231244410 + AluJo SINE Alu 29 260 -52 3515 117 31 13 chr2 22012173 22012728 -231243855 - MER61E LTR ERV1 -4 565 1 1323 188 25 43 chr2 22012728 22012774 -231243809 + AluJo SINE Alu 260 305 -7 317 239 35 26 chr2 22013291 22013404 -231243179 - MLT1H-int LTR MaLR -1269 102 2 421 240 100 60 chr2 22013407 22013738 -231242845 - MLT1H LTR MaLR -2 550 108 489 203 93 0 chr2 22014140 22014258 -231242325 - MER94 DNA DNA 0 134 6 255 271 0 14 chr2 22014268 22014338 -231242245 + HAL1b LINE L1 392 460 -888 3084 124 50 2 chr2 22014422 22014904 -231241679 - MER84 LTR ERV1 0 507 3 4021 120 14 14 chr2 22015356 22015990 -231240593 + MER41B LTR ERV1 2 635 0 277 280 141 49 chr2 22016291 22017063 -231239520 + L1 LINE L1 2205 3047 -3099 23 0 0 0 chr2 22018516 22018539 -231238044 + AT_rich Low_complexity Low_complexity 1 23 0 25 83 0 0 chr2 22018565 22018625 -231237958 + AT_rich Low_complexity Low_complexity 1 60 0 22 0 0 0 chr2 22018956 22018978 -231237605 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 22020789 22020810 -231235773 + AT_rich Low_complexity Low_complexity 1 21 0 1772 162 6 19 chr2 22021221 22021536 -231235047 + AluJb SINE Alu 1 311 -1 1659 156 27 21 chr2 22022168 22022543 -231234040 + MER1B DNA MER1_type 1 337 -2 646 152 0 0 chr2 22022753 22022858 -231233725 - L1MA10 LINE L1 -25 6309 6205 1536 152 116 27 chr2 22022981 22023316 -231233267 - MLT1A1 LTR MaLR 0 365 1 396 279 54 0 chr2 22023316 22023463 -231233120 - L1M4 LINE L1 -2489 3657 3503 21 36 0 0 chr2 22025026 22025054 -231231529 + AT_rich Low_complexity Low_complexity 1 28 0 340 303 11 110 chr2 22026268 22026532 -231230051 - L1M4 LINE L1 -2296 3850 3613 200 322 0 0 chr2 22026977 22027064 -231229519 + T-rich Low_complexity Low_complexity 1 87 0 21 0 0 0 chr2 22027358 22027379 -231229204 + AT_rich Low_complexity Low_complexity 1 21 0 14088 156 24 7 chr2 22027393 22028173 -231228410 - Tigger1 DNA MER2_type 0 2418 1653 2840 189 136 42 chr2 22028173 22028928 -231227655 - LTR1B LTR ERV1 0 826 1 14088 156 24 7 chr2 22028928 22030525 -231226058 - Tigger1 DNA MER2_type -765 1653 1 531 348 81 45 chr2 22030624 22030815 -231225768 - HAL1 LINE L1 -904 1603 1420 2179 123 0 0 chr2 22030815 22031108 -231225475 + AluSx SINE Alu 3 295 -17 531 348 81 45 chr2 22031108 22031407 -231225176 - HAL1 LINE L1 -1087 1420 1086 3105 184 40 17 chr2 22031407 22032101 -231224482 - MER67C LTR ERV1 0 710 1 531 348 81 45 chr2 22032101 22032193 -231224390 - HAL1 LINE L1 -1421 1086 999 267 306 44 39 chr2 22032760 22032940 -231223643 + MLT1L LTR MaLR 98 278 -337 305 340 66 23 chr2 22034401 22034657 -231221926 - MLT1J1 LTR MaLR -4 442 176 367 179 83 12 chr2 22034781 22034865 -231221718 - MLT1J2 LTR MaLR -360 90 1 250 322 41 85 chr2 22035514 22035784 -231220799 + MIR SINE MIR 5 262 0 202 306 97 28 chr2 22036084 22036156 -231220427 - L2 LINE L2 -38 3234 3158 664 323 132 40 chr2 22038748 22039345 -231217238 - L3 LINE CR1 -396 1181 530 1128 161 256 25 chr2 22041019 22041293 -231215290 - MER1B DNA MER1_type 0 337 1 419 290 29 104 chr2 22042065 22042451 -231214132 - L1M4 LINE L1 -3002 3144 2788 910 262 78 38 chr2 22043104 22043501 -231213082 - L1ME3 LINE L1 -80 6082 5670 1408 211 32 7 chr2 22044827 22044983 -231211600 - AluJo SINE Alu -20 292 124 225 0 0 0 chr2 22044983 22045008 -231211575 + (TATG)n Simple_repeat Simple_repeat 4 28 0 1408 211 32 7 chr2 22045008 22045136 -231211447 - AluJo SINE Alu -188 124 1 296 251 113 111 chr2 22045367 22045765 -231210818 + MLT1J LTR MaLR 113 511 0 1710 256 28 32 chr2 22046954 22047539 -231209044 + MLT2F LTR ERVL 45 661 -2 412 149 81 0 chr2 22047703 22047777 -231208806 + MIR SINE MIR 183 262 0 628 281 101 46 chr2 22047788 22048116 -231208467 + L3 LINE CR1 946 1291 -286 371 306 38 50 chr2 22050551 22050711 -231205872 + MIR SINE MIR 26 183 -79 1135 280 114 49 chr2 22050857 22051514 -231205069 + HAL1 LINE L1 344 1043 -1464 252 237 53 44 chr2 22051857 22051971 -231204612 + L1MC4 LINE L1 6587 6701 -1341 344 296 69 39 chr2 22052208 22052411 -231204172 + L1ME LINE L1 5426 5634 -528 185 224 10 31 chr2 22053870 22053894 -231202689 + (TA)n Simple_repeat Simple_repeat 1 24 -72 13467 136 39 16 chr2 22053894 22056250 -231200333 - Tigger1 DNA MER2_type -4 2414 5 185 224 10 31 chr2 22056250 22056323 -231200260 + (TA)n Simple_repeat Simple_repeat 24 96 0 3813 70 12 2 chr2 22056408 22056897 -231199686 + LTR3b LTR ERVK 3 496 -4 283 160 29 14 chr2 22057658 22057802 -231198781 + CT-rich Low_complexity Low_complexity 1 146 0 299 237 97 0 chr2 22057866 22057959 -231198624 - MER91C DNA MER1_type -1 139 38 211 356 14 0 chr2 22058155 22058228 -231198355 - MIR3 SINE MIR -13 195 122 483 321 46 28 chr2 22061312 22061530 -231195053 - MIR SINE MIR -35 227 6 204 370 17 34 chr2 22061585 22061704 -231194879 + L2 LINE L2 2967 3083 -189 218 218 18 18 chr2 22063208 22063263 -231193320 + GA-rich Low_complexity Low_complexity 2 56 0 300 355 30 18 chr2 22063328 22063494 -231193089 + MIR SINE MIR 19 186 -76 22 56 0 0 chr2 22063809 22063845 -231192738 + AT_rich Low_complexity Low_complexity 1 36 0 517 268 102 17 chr2 22064380 22064615 -231191968 - MLT1L LTR MaLR -349 266 12 1338 216 10 80 chr2 22065132 22065531 -231191052 + MLT1A2 LTR MaLR 4 374 0 550 161 9 45 chr2 22066453 22066565 -231190018 - L1MC1 LINE L1 -119 6214 6107 1369 198 80 0 chr2 22066569 22066721 -231189862 - AluJo SINE Alu -28 284 146 180 0 0 0 chr2 22066721 22066741 -231189842 + (TG)n Simple_repeat Simple_repeat 1 20 0 1369 198 80 0 chr2 22066741 22066851 -231189732 - AluJo SINE Alu -166 146 1 536 153 9 72 chr2 22067086 22067197 -231189386 + MER63 DNA MER1_type 679 782 -280 244 309 213 7 chr2 22069088 22069224 -231187359 + L2 LINE L2 3094 3257 -15 401 311 34 53 chr2 22069759 22069968 -231186615 + MIR3 SINE MIR 3 207 -1 198 239 65 0 chr2 22072054 22072100 -231184483 + L2 LINE L2 3257 3305 -8 464 331 49 37 chr2 22072124 22072369 -231184214 + MIR SINE MIR 13 260 -2 26 0 0 0 chr2 22073354 22073380 -231183203 + AT_rich Low_complexity Low_complexity 1 26 0 937 216 103 92 chr2 22074207 22074352 -231182231 + L1M4 LINE L1 3842 3984 -2162 342 171 29 0 chr2 22074352 22074422 -231182161 + L1PA16 LINE L1 6086 6157 -9 937 216 103 92 chr2 22074422 22074909 -231181674 + L1M4 LINE L1 3984 4481 -1665 766 308 19 5 chr2 22075089 22075334 -231181249 - MIR SINE MIR -10 252 6 1077 170 75 85 chr2 22076722 22077036 -231179547 + MSTA LTR MaLR 1 388 -38 1926 164 0 3 chr2 22077036 22077347 -231179236 - AluJb SINE Alu -2 310 1 1077 170 75 85 chr2 22077347 22077386 -231179197 + MSTA LTR MaLR 388 426 0 1620 206 19 25 chr2 22077447 22077806 -231178777 + MLT1A1 LTR MaLR 5 361 -4 448 330 33 14 chr2 22077915 22078127 -231178456 - MIR SINE MIR 0 262 47 720 228 48 6 chr2 22078560 22078727 -231177856 + MLT1A1 LTR MaLR 7 180 -185 720 178 0 0 chr2 22078740 22078858 -231177725 + MLT1A1 LTR MaLR 246 363 -2 204 67 0 0 chr2 22079265 22079295 -231177288 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 251 283 0 0 chr2 22079331 22079384 -231177199 + MIR SINE MIR 51 103 -159 188 247 144 52 chr2 22079759 22079856 -231176727 + L2 LINE L2 3208 3313 0 298 245 10 71 chr2 22079934 22080032 -231176551 - MIR SINE MIR -75 133 42 490 169 20 30 chr2 22081826 22081927 -231174656 + MLT1A1 LTR MaLR 1 85 -280 1212 139 135 87 chr2 22082011 22082299 -231174284 - AluJb SINE Alu 0 302 1 33 56 0 0 chr2 22082490 22082544 -231174039 + AT_rich Low_complexity Low_complexity 1 54 0 1353 186 52 0 chr2 22083024 22083329 -231173254 - MER33 DNA MER1_type -13 311 1 461 262 139 58 chr2 22083330 22083440 -231173143 + MER5A DNA MER1_type 4 135 -54 1908 124 0 32 chr2 22083440 22083743 -231172840 - AluSc SINE Alu 0 298 5 461 262 139 58 chr2 22083743 22083803 -231172780 + MER5A DNA MER1_type 135 189 0 2236 111 3 0 chr2 22085189 22085487 -231171096 + AluSg SINE Alu 1 299 -11 1330 209 47 75 chr2 22086293 22086680 -231169903 - MLT1B LTR MaLR 0 390 15 397 144 58 29 chr2 22089083 22089187 -231167396 - MER53 DNA DNA -70 119 13 566 259 103 19 chr2 22089674 22090099 -231166484 - L1M4 LINE L1 -3572 2574 2114 591 318 79 65 chr2 22090735 22091304 -231165279 - HAL1 LINE L1 -1111 1396 820 1761 281 27 38 chr2 22091430 22091979 -231164604 + MLT1E LTR MaLR 51 593 0 2845 145 23 0 chr2 22093426 22093909 -231162674 - L1PB1 LINE L1 -1 6866 6373 300 45 0 0 chr2 22093919 22093963 -231162620 - L1PA6 LINE L1 -2 6152 6109 9075 186 44 29 chr2 22093964 22098488 -231158095 - L1PB1 LINE L1 -1209 5653 903 676 289 24 0 chr2 22098573 22098781 -231157802 + MIR SINE MIR 46 258 -4 33 0 0 0 chr2 22099027 22099060 -231157523 + AT_rich Low_complexity Low_complexity 1 33 0 1577 105 35 113 chr2 22100921 22101293 -231155290 + L1MA2 LINE L1 5962 6304 0 354 316 40 0 chr2 22104834 22104986 -231151597 + L1MEc LINE L1 20 177 -6219 * 688 276 97 20 chr2 22104983 22105571 -231151012 + L1MEc LINE L1 1005 1637 -4759 3666 63 0 11 chr2 22105720 22106197 -231150386 - L1PA7 LINE L1 -4 6150 5679 1659 153 66 38 chr2 22106489 22106854 -231149729 + THE1C LTR MaLR 1 375 0 9646 138 11 39 chr2 22106856 22108480 -231148103 + THE1C-int LTR MaLR 3 1580 0 1928 120 67 25 chr2 22108481 22108840 -231147743 + THE1C LTR MaLR 2 375 0 357 283 90 21 chr2 22110200 22110345 -231146238 + MIR SINE MIR 90 244 -18 199 242 91 15 chr2 22111384 22111450 -231145133 + L2 LINE L2 3232 3302 -11 2116 120 3 25 chr2 22112079 22112395 -231144188 - AluSx SINE Alu -3 309 1 210 286 175 3 chr2 22112554 22112648 -231143935 - L2 LINE L2 -16 3297 3141 5938 103 13 6 chr2 22113173 22114224 -231142359 + L1PA14 LINE L1 5098 6157 -4 2149 86 0 4 chr2 22114269 22114536 -231142047 + AluSq SINE Alu 23 288 -25 561 300 31 24 chr2 22114624 22114911 -231141672 - L1ME LINE L1 -357 5813 5525 437 346 88 9 chr2 22114911 22115175 -231141408 - L1MEc LINE L1 -4562 1978 1709 360 318 27 20 chr2 22115328 22115476 -231141107 - L1MEc LINE L1 -5269 1261 1113 286 325 53 105 chr2 22115657 22116326 -231140257 - L2 LINE L2 -542 2772 2199 2660 77 0 0 chr2 22116326 22116675 -231139908 - L1PA8 LINE L1 0 6172 5824 286 325 53 105 chr2 22116675 22117280 -231139303 - L2 LINE L2 -1115 2199 1564 2198 111 3 0 chr2 22117371 22117668 -231138915 + AluSg SINE Alu 2 299 -11 366 259 36 54 chr2 22117764 22117930 -231138653 - MIR SINE MIR -3 259 97 243 326 47 0 chr2 22117958 22118044 -231138539 - MIR SINE MIR -155 107 18 231 313 43 18 chr2 22118747 22118910 -231137673 - L1ME LINE L1 -364 5757 5591 23 0 0 0 chr2 22118924 22118947 -231137636 + AT_rich Low_complexity Low_complexity 1 23 0 231 277 44 101 chr2 22121573 22121732 -231134851 - L3 LINE CR1 -48 1529 1380 359 320 26 26 chr2 22121780 22121936 -231134647 + MIR3 SINE MIR 25 180 -28 27 0 0 0 chr2 22121986 22122013 -231134570 + AT_rich Low_complexity Low_complexity 1 27 0 235 306 108 18 chr2 22123145 22123256 -231133327 + MIR SINE MIR 28 148 -114 1447 151 19 28 chr2 22123306 22123624 -231132959 - L1M2 LINE L1 -682 5618 5304 420 243 73 0 chr2 22123616 22123752 -231132831 - L1MA4 LINE L1 0 6300 6155 * 3373 160 23 21 chr2 22123730 22124516 -231132067 - L1M LINE L1 -815 5368 4586 2630 166 100 19 chr2 22124514 22125146 -231131437 + L1MA6 LINE L1 5605 6287 -13 * 610 339 91 16 chr2 22125274 22125660 -231130923 - LTR16B LTR ERVL -49 415 1 1345 313 131 57 chr2 22125746 22126740 -231129843 - L2 LINE L2 -353 2961 1895 811 160 15 0 chr2 22127448 22127579 -231129004 + FLAM_C SINE Alu 1 133 0 1010 289 74 16 chr2 22127874 22128237 -231128346 + L3 LINE CR1 1178 1561 -16 2057 148 28 3 chr2 22128452 22128816 -231127767 - Tigger4(Zombi) DNA MER2_type 0 2731 2359 454 176 24 0 chr2 22128838 22128923 -231127660 - Tigger4(Zombi) DNA MER2_type -2644 87 1 2871 207 29 88 chr2 22129414 22130720 -231125863 - L1M2 LINE L1 -597 5694 4482 2164 220 26 14 chr2 22130722 22131308 -231125275 - L1M2 LINE L1 -2234 3912 3320 1441 249 11 19 chr2 22131307 22131685 -231124898 + L1M3e LINE L1 1734 2108 -4922 * 7426 217 66 18 chr2 22131716 22133510 -231123073 + L1MA4A LINE L1 5 1884 -4965 5020 181 33 13 chr2 22133499 22135118 -231121465 + L1MA4A LINE L1 5359 6999 -6 * 978 268 42 67 chr2 22135146 22135817 -231120766 + L1M4c LINE L1 990 1643 -4741 261 344 142 16 chr2 22136181 22136428 -231120155 - L2 LINE L2 -44 3228 2951 671 236 133 10 chr2 22137135 22137338 -231119245 + MIR SINE MIR 15 242 -20 778 284 21 19 chr2 22139093 22139187 -231117396 - L2 LINE L2 -186 3127 3035 2190 107 7 0 chr2 22139187 22139476 -231117107 + AluSg SINE Alu 1 291 -19 778 284 21 19 chr2 22139476 22139729 -231116854 - L2 LINE L2 -278 3035 2780 374 280 128 44 chr2 22139757 22140007 -231116576 + L2 LINE L2 2819 3089 -224 287 247 10 21 chr2 22140014 22140111 -231116472 - LTR33A LTR ERVL -10 513 418 230 191 0 32 chr2 22140658 22140721 -231115862 + (CCA)n Simple_repeat Simple_repeat 3 63 0 279 114 0 0 chr2 22141225 22141269 -231115314 + (TTCA)n Simple_repeat Simple_repeat 1 44 0 711 329 82 30 chr2 22141271 22141700 -231114883 - L2 LINE L2 -15 3257 2807 235 298 53 26 chr2 22141746 22141860 -231114723 - L2 LINE L2 -897 2417 2301 1227 114 6 6 chr2 22142119 22142294 -231114289 + AluSx SINE Alu 1 175 -137 2481 67 0 0 chr2 22142454 22142751 -231113832 + AluY SINE Alu 1 297 -14 1074 231 154 23 chr2 22142769 22143198 -231113385 + MLT1H LTR MaLR 35 555 0 371 303 9 9 chr2 22143220 22143329 -231113254 - HERVL LTR ERVL -1195 4459 4351 22 0 0 0 chr2 22144091 22144113 -231112470 + AT_rich Low_complexity Low_complexity 1 22 0 1569 192 47 27 chr2 22144205 22144570 -231112013 + THE1C LTR MaLR 4 375 0 260 338 47 20 chr2 22144825 22144973 -231111610 - MLT1J2 LTR MaLR -40 410 259 412 238 35 14 chr2 22145074 22145217 -231111366 - MER5C DNA MER1_type -96 228 83 3802 166 27 3 chr2 22145218 22145893 -231110690 - L1PA15 LINE L1 -7 6158 5468 373 291 148 13 chr2 22146902 22147132 -231109451 - L1MC/D LINE L1 -788 5571 5311 228 313 65 34 chr2 22147532 22147794 -231108789 - L1MC/D LINE L1 -1315 4831 4562 358 302 165 32 chr2 22148097 22148498 -231108085 - L1MC/D LINE L1 -2884 3262 2809 578 274 108 26 chr2 22148596 22149199 -231107384 - L1MC/D LINE L1 -3381 2765 2114 450 312 86 41 chr2 22149835 22150104 -231106479 - HAL1 LINE L1 -1111 1396 1116 14503 227 34 14 chr2 22150544 22152167 -231104416 - L1P4 LINE L1 -680 6923 5334 4634 59 7 2 chr2 22152167 22152760 -231103823 - L1PA7 LINE L1 0 6154 5559 14503 227 34 14 chr2 22152760 22153497 -231103086 - L1P4 LINE L1 -2269 5334 4613 1686 186 0 0 chr2 22153497 22153772 -231102811 - AluSx SINE Alu -11 301 27 14503 227 34 14 chr2 22153772 22156352 -231100231 - L1P4 LINE L1 -2990 4613 1884 318 284 57 0 chr2 22156353 22156441 -231100142 - MER5C DNA MER1_type -229 95 3 260 309 59 53 chr2 22156441 22156520 -231100063 - MLT1J2 LTR MaLR -297 153 71 2141 194 24 5 chr2 22156520 22156942 -231099641 - MSTB1 LTR MaLR 0 432 3 260 309 59 53 chr2 22156942 22157014 -231099569 - MLT1J2 LTR MaLR -379 71 1 206 340 41 48 chr2 22157560 22157707 -231098876 - L2 LINE L2 -844 2470 2325 1536 261 167 91 chr2 22158984 22159536 -231097047 + MLT1E2 LTR MaLR 5 598 -56 395 299 92 57 chr2 22160114 22160428 -231096155 - HAL1 LINE L1 -1291 1216 892 315 0 0 0 chr2 22160912 22160947 -231095636 + (TA)n Simple_repeat Simple_repeat 1 35 0 1927 106 4 29 chr2 22160963 22161238 -231095345 - AluSx SINE Alu -30 282 15 380 305 126 0 chr2 22161603 22161770 -231094813 - HAL1 LINE L1 -2318 189 2 219 139 0 0 chr2 22162255 22162291 -231094292 + (ATG)n Simple_repeat Simple_repeat 3 38 0 188 280 53 53 chr2 22163009 22163084 -231093499 + L3 LINE CR1 1370 1444 -133 376 213 68 108 chr2 22163232 22163437 -231093146 - MIR3 SINE MIR -28 180 31 271 346 51 56 chr2 22163672 22163906 -231092677 + L2 LINE L2 3030 3262 -10 906 280 115 7 chr2 22164782 22165061 -231091522 + MLT1I LTR MaLR 101 409 0 780 288 21 21 chr2 22166355 22166595 -231089988 - MIR SINE MIR 0 262 23 264 294 181 23 chr2 22166905 22167126 -231089457 + MIR SINE MIR 7 262 0 195 186 0 0 chr2 22169085 22169128 -231087455 + CT-rich Low_complexity Low_complexity 2 44 0 5197 130 66 2 chr2 22170532 22170873 -231085710 - L1PA13 LINE L1 -1 6162 5844 207 0 0 0 chr2 22170873 22170896 -231085687 + (TTA)n Simple_repeat Simple_repeat 2 24 0 5197 130 66 2 chr2 22170896 22171607 -231084976 - L1PA13 LINE L1 -319 5844 5047 368 177 13 25 chr2 22171608 22171687 -231084896 + AluJb SINE Alu 29 106 -196 207 338 54 0 chr2 22171749 22171823 -231084760 - MIR SINE MIR -131 131 54 234 352 96 0 chr2 22171980 22172105 -231084478 - MIR SINE MIR -124 138 2 513 306 73 16 chr2 22172125 22172370 -231084213 - MIR SINE MIR -3 259 1 215 280 0 20 chr2 22172489 22172539 -231084044 - L2 LINE L2 -226 3046 2998 857 219 5 19 chr2 22173362 22173572 -231083011 - L1MB8 LINE L1 0 6178 5972 930 216 30 15 chr2 22173914 22174113 -231082470 - MER82 DNA MER2_type 0 653 452 267 352 48 14 chr2 22174153 22174298 -231082285 + MIR SINE MIR 2 151 -111 49 32 0 0 chr2 22174341 22174404 -231082179 + AT_rich Low_complexity Low_complexity 1 63 0 284 284 0 23 chr2 22174407 22174495 -231082088 - MER82 DNA MER2_type -567 86 1 238 238 16 16 chr2 22174834 22174897 -231081686 - MLT1J LTR MaLR -146 365 303 26 0 0 0 chr2 22175782 22175808 -231080775 + AT_rich Low_complexity Low_complexity 1 26 0 29 28 0 0 chr2 22175885 22175921 -231080662 + AT_rich Low_complexity Low_complexity 1 36 0 389 337 47 11 chr2 22176307 22176497 -231080086 + MIR SINE MIR 7 203 -59 340 294 33 0 chr2 22176589 22176681 -231079902 + polypurine Low_complexity Low_complexity 6 100 0 873 203 50 68 chr2 22177230 22177452 -231079131 + MER20 DNA MER1_type 2 219 0 27 62 0 0 chr2 22178135 22178183 -231078400 + AT_rich Low_complexity Low_complexity 1 48 0 241 300 0 0 chr2 22179121 22179191 -231077392 + L1ME LINE L1 2959 3028 -3118 310 336 139 40 chr2 22179437 22179913 -231076670 + L1ME LINE L1 3291 3813 -2333 282 282 29 10 chr2 22180432 22180535 -231076048 + L1ME LINE L1 4506 4610 -1536 42508 36 23 1 chr2 22181111 22187149 -231069434 - L1PA3 LINE L1 0 6155 1 289 297 7 36 chr2 22187750 22187888 -231068695 + L1ME LINE L1 5612 5745 -376 286 242 125 92 chr2 22188727 22188847 -231067736 - L2 LINE L2 -1 3312 3189 248 224 0 0 chr2 22189093 22189142 -231067441 + MER3 DNA MER1_type 42 90 -119 * 258 204 32 54 chr2 22189121 22189214 -231067369 - MER3 DNA MER1_type -118 91 1 1985 139 0 0 chr2 22189243 22189524 -231067059 - AluSx SINE Alu -29 283 3 638 318 218 3 chr2 22190915 22191236 -231065347 - L2 LINE L2 0 3313 2924 333 283 25 33 chr2 22191232 22191352 -231065231 - L2 LINE L2 -580 2734 2616 * 248 169 51 0 chr2 22191988 22192047 -231064536 - L1MCa LINE L1 -4359 2067 2006 245 182 18 0 chr2 22192047 22192102 -231064481 + (TA)n Simple_repeat Simple_repeat 1 56 0 33 0 0 0 chr2 22192652 22192685 -231063898 + AT_rich Low_complexity Low_complexity 1 33 0 185 286 48 32 chr2 22193289 22193352 -231063231 - L2 LINE L2 -18 3295 3232 1942 130 3 3 chr2 22194307 22194618 -231061965 + AluSx SINE Alu 1 311 0 2659 244 99 40 chr2 22195306 22196362 -231060221 + L1MC4 LINE L1 6884 8002 -40 363 238 38 12 chr2 22196369 22196529 -231060054 + (TA)n Simple_repeat Simple_repeat 2 165 0 527 211 18 0 chr2 22196619 22196733 -231059850 - L1MD2 LINE L1 -4 6355 6240 230 81 0 0 chr2 22196733 22196770 -231059813 + L1MC4 LINE L1 8006 8042 0 304 318 63 8 chr2 22197017 22197143 -231059440 + MIR SINE MIR 121 253 -9 21 0 0 0 chr2 22197706 22197727 -231058856 + AT_rich Low_complexity Low_complexity 1 21 0 679 142 97 0 chr2 22198057 22198191 -231058392 + L1MA4 LINE L1 6147 6293 -7 249 286 224 56 chr2 22198493 22198654 -231057929 + MIR SINE MIR 3 190 -72 1637 186 3 7 chr2 22200885 22201181 -231055402 + 7SLRNA srpRNA srpRNA 1 295 -25 3496 238 42 8 chr2 22201647 22202538 -231054045 - L1MB5 LINE L1 0 6672 5752 2013 234 76 33 chr2 22202557 22203345 -231053238 - L1MB5 LINE L1 -4741 1905 1043 444 123 12 12 chr2 22203345 22203426 -231053157 - L1PA10 LINE L1 -10 6158 6078 2013 234 76 33 chr2 22203426 22203661 -231052922 - L1MB5 LINE L1 -5603 1043 820 270 350 87 0 chr2 22205474 22205577 -231051006 - L2 LINE L2 -18 3254 3143 295 314 13 70 chr2 22205674 22205733 -231050850 - MER5A DNA MER1_type -26 163 102 1788 133 98 14 chr2 22205733 22206079 -231050504 + THE1C LTR MaLR 1 375 0 295 314 13 70 chr2 22206079 22206175 -231050408 - MER5A DNA MER1_type -87 102 17 1596 180 70 44 chr2 22207090 22207473 -231049110 - MER21B LTR ERV1 -11 852 460 850 224 90 0 chr2 22207469 22207670 -231048913 + MLT1E2 LTR MaLR 406 624 -2 * 193 238 0 0 chr2 22209195 22209237 -231047346 - MIR SINE MIR -116 146 105 2619 82 0 3 chr2 22209472 22209837 -231046746 - L1P LINE L1 -3961 2185 1822 1968 62 23 0 chr2 22209837 22210093 -231046490 + L1PA6 LINE L1 5893 6154 0 313 353 26 7 chr2 22210569 22210722 -231045861 + MIR SINE MIR 94 249 -13 366 273 106 45 chr2 22211857 22212048 -231044535 - MIR SINE MIR 0 262 55 213 268 24 126 chr2 22212417 22212544 -231044039 + L2 LINE L2 3141 3254 -18 25 51 0 0 chr2 22213000 22213039 -231043544 + AT_rich Low_complexity Low_complexity 1 39 0 212 255 0 0 chr2 22214112 22214159 -231042424 + (CA)n Simple_repeat Simple_repeat 2 48 0 25 51 0 0 chr2 22214782 22214821 -231041762 + AT_rich Low_complexity Low_complexity 1 39 0 231 204 20 0 chr2 22215461 22215510 -231041073 + (CA)n Simple_repeat Simple_repeat 2 51 0 180 0 0 0 chr2 22215604 22215624 -231040959 + (TTA)n Simple_repeat Simple_repeat 3 22 0 1387 62 6 0 chr2 22215624 22215802 -231040781 - L1PA7 LINE L1 -18 6136 5958 335 360 64 12 chr2 22216368 22216540 -231040043 - MIR SINE MIR -46 216 36 265 367 33 0 chr2 22216579 22216699 -231039884 + MIR3 SINE MIR 40 163 -45 255 255 83 83 chr2 22218549 22218741 -231037842 + L2 LINE L2 1808 1999 -1315 22 0 0 0 chr2 22218772 22218794 -231037789 + AT_rich Low_complexity Low_complexity 1 22 0 2239 127 8 23 chr2 22218981 22219352 -231037231 + THE1B LTR MaLR 1 428 0 518 336 61 9 chr2 22220368 22220582 -231036001 - MIR SINE MIR -18 244 20 631 280 24 6 chr2 22221053 22221221 -231035362 + MER5B DNA MER1_type 1 171 -7 2059 146 10 0 chr2 22221421 22221723 -231034860 + AluSx SINE Alu 1 305 -7 400 298 55 29 chr2 22221971 22222176 -231034407 - MIR SINE MIR -24 238 30 1855 115 22 15 chr2 22224200 22224469 -231032114 + AluSp SINE Alu 26 296 -17 502 325 48 17 chr2 22225220 22225451 -231031132 + MIR SINE MIR 23 260 -2 562 205 30 95 chr2 22226421 22226621 -231029962 + MER5A DNA MER1_type 1 187 -2 2233 107 0 7 chr2 22227951 22228261 -231028322 - AluSc SINE Alu -1 308 1 912 191 8 89 chr2 22228347 22228604 -231027979 - L1MA9 LINE L1 -38 6274 6039 1444 116 5 0 chr2 22228605 22228829 -231027754 - HSMAR2 DNA Mariner -1 1301 1077 300 365 56 0 chr2 22228976 22229083 -231027500 + L2 LINE L2 3115 3227 -45 480 333 57 37 chr2 22229248 22229494 -231027089 - MIR SINE MIR -10 252 2 241 184 20 0 chr2 22229529 22229578 -231027005 + GA-rich Low_complexity Low_complexity 4 53 0 1439 293 160 25 chr2 22229712 22230545 -231026038 + L2 LINE L2 2243 3189 -124 745 317 90 15 chr2 22230594 22230862 -231025721 + MER45C DNA AcHobo 1 288 -665 1262 201 0 62 chr2 22230865 22231153 -231025430 - AluJo SINE Alu -14 298 29 300 196 0 0 chr2 22231449 22231500 -231025083 + MER45 DNA AcHobo 1530 1580 -1 202 232 36 18 chr2 22231544 22231600 -231024983 + L2 LINE L2 3254 3310 -3 364 274 63 29 chr2 22234109 22234284 -231022299 + L1ME LINE L1 5520 5700 -421 309 279 41 41 chr2 22234377 22234499 -231022084 + L1ME LINE L1 5544 5665 -2143 566 205 139 36 chr2 22234544 22234710 -231021873 - MER58A DNA MER1_type -1 223 41 22 0 0 0 chr2 22234841 22234863 -231021720 + AT_rich Low_complexity Low_complexity 1 22 0 601 285 186 44 chr2 22235124 22235584 -231020999 - MLT1H1 LTR MaLR -72 495 1 22 0 0 0 chr2 22235621 22235643 -231020940 + AT_rich Low_complexity Low_complexity 1 22 0 425 284 54 64 chr2 22236998 22237294 -231019289 + MLT1L LTR MaLR 6 298 -317 272 252 0 10 chr2 22237325 22237428 -231019155 + (TA)n Simple_repeat Simple_repeat 1 102 0 261 222 0 0 chr2 22237462 22237525 -231019058 + (TG)n Simple_repeat Simple_repeat 2 64 0 706 250 28 0 chr2 22237526 22237670 -231018913 - FRAM SINE Alu -25 151 4 530 268 70 0 chr2 22237681 22237823 -231018760 + MLT1L LTR MaLR 341 492 -123 302 359 56 0 chr2 22237925 22238092 -231018491 + MIR SINE MIR 32 206 -56 853 160 15 73 chr2 22238316 22238522 -231018061 + L1MA9 LINE L1 6119 6312 0 1205 109 11 5 chr2 22238948 22239132 -231017451 - L1PB2 LINE L1 0 6151 5967 260 281 52 30 chr2 22240036 22240171 -231016412 + L1ME2 LINE L1 6016 6153 -11 312 314 69 25 chr2 22240295 22240454 -231016129 + L1ME LINE L1 5676 5841 -280 3314 153 20 15 chr2 22240495 22241089 -231015494 + L1MC1 LINE L1 5601 6197 -136 22 56 0 0 chr2 22241148 22241184 -231015399 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr2 22241629 22241657 -231014926 + AT_rich Low_complexity Low_complexity 1 28 0 532 267 108 46 chr2 22241891 22242344 -231014239 + L1ME4a LINE L1 5355 5835 -286 613 316 80 4 chr2 22242393 22242630 -231013953 + MIR SINE MIR 7 261 -1 276 291 47 12 chr2 22244192 22244278 -231012305 - L2 LINE L2 -20 3293 3205 1898 131 31 69 chr2 22244485 22244835 -231011748 - MER1B DNA MER1_type 0 337 1 201 121 0 0 chr2 22245252 22245285 -231011298 + (CAATT)n Simple_repeat Simple_repeat 3 35 0 286 252 35 112 chr2 22246035 22246178 -231010405 + MIR SINE MIR 20 151 -111 393 188 0 0 chr2 22247105 22247185 -231009398 + (CA)n Simple_repeat Simple_repeat 2 81 0 181 148 93 0 chr2 22248258 22248312 -231008271 + (TATATG)n Simple_repeat Simple_repeat 4 62 0 343 288 63 44 chr2 22248551 22248756 -231007827 + LTR33A LTR ERVL 312 520 -3 21 36 0 0 chr2 22249430 22249458 -231007125 + AT_rich Low_complexity Low_complexity 1 28 0 1781 133 0 4 chr2 22251376 22251631 -231004952 - AluSx SINE Alu -2 310 57 859 138 0 0 chr2 22251633 22251756 -231004827 - AluSq/x SINE Alu -189 123 1 201 359 41 14 chr2 22254770 22254915 -231001668 - MIR SINE MIR -46 216 68 22 0 0 0 chr2 22255141 22255163 -231001420 + AT_rich Low_complexity Low_complexity 1 22 0 1088 162 17 6 chr2 22256311 22256490 -231000093 + MER5A DNA MER1_type 2 182 -7 387 327 39 6 chr2 22256701 22256857 -230999726 + MIR SINE MIR 47 207 -55 185 422 0 20 chr2 22258231 22258333 -230998250 - MIR SINE MIR -85 123 24 24 53 0 0 chr2 22258554 22258592 -230997991 + AT_rich Low_complexity Low_complexity 1 38 0 1944 93 0 12 chr2 22258692 22258949 -230997634 + AluSg SINE Alu 46 299 -11 2223 123 23 11 chr2 22259566 22259917 -230996666 - THE1A LTR MaLR 0 355 1 11072 118 4 3 chr2 22259917 22261495 -230995088 - THE1A-int LTR MaLR 0 1580 1 2266 113 14 11 chr2 22261495 22261849 -230994734 - THE1A LTR MaLR 0 355 1 443 259 7 43 chr2 22261933 22262072 -230994511 - MIR SINE MIR -37 225 92 11362 228 23 9 chr2 22263307 22267266 -230989317 + L1PA16 LINE L1 2150 6162 -4 767 159 153 0 chr2 22267265 22267428 -230989155 - L1M3 LINE L1 -534 5800 5613 * 1779 178 42 28 chr2 22267450 22267922 -230988661 - MLT2A2 LTR ERVL -68 486 6 1605 229 70 11 chr2 22267934 22268466 -230988117 - L1M3c LINE L1 -4531 1610 1048 235 287 14 35 chr2 22268507 22268650 -230987933 + CT-rich Low_complexity Low_complexity 3 142 0 213 39 0 0 chr2 22268693 22268719 -230987864 + (TG)n Simple_repeat Simple_repeat 1 26 0 245 274 0 40 chr2 22268883 22269007 -230987576 + CT-rich Low_complexity Low_complexity 2 120 0 23 0 0 0 chr2 22269070 22269093 -230987490 + AT_rich Low_complexity Low_complexity 1 23 0 315 335 79 70 chr2 22269297 22269930 -230986653 - HAL1 LINE L1 -962 1545 907 1810 140 0 76 chr2 22271182 22271355 -230985228 - AluSx SINE Alu -8 304 166 489 62 0 0 chr2 22271355 22271420 -230985163 + (TG)n Simple_repeat Simple_repeat 2 66 0 1810 140 0 76 chr2 22271420 22271575 -230985008 - AluSx SINE Alu -146 166 1 29 106 0 0 chr2 22272491 22272604 -230983979 + AT_rich Low_complexity Low_complexity 1 113 0 877 201 13 0 chr2 22272632 22272786 -230983797 + FRAM SINE Alu 3 158 -18 2433 71 0 0 chr2 22273121 22273429 -230983154 + AluY SINE Alu 1 308 -3 226 345 36 50 chr2 22273520 22273659 -230982924 - L2 LINE L2 0 3313 3177 670 172 0 0 chr2 22274072 22274194 -230982389 - pTR5 LTR ERV1 -1576 862 741 3660 51 32 0 chr2 22274232 22274702 -230981881 + L1PA7 LINE L1 5660 6144 -10 1658 253 90 21 chr2 22276172 22276998 -230979585 + L1M4 LINE L1 2521 3403 -2743 316 245 88 0 chr2 22277711 22277813 -230978770 - MIR SINE MIR -1 261 151 21 36 0 0 chr2 22277959 22277987 -230978596 + AT_rich Low_complexity Low_complexity 1 28 0 1330 191 165 45 chr2 22278092 22278474 -230978109 + MSTC LTR MaLR 1 428 0 2253 68 7 23 chr2 22278855 22279162 -230977421 - AluY SINE Alu -9 302 1 23 33 0 0 chr2 22279673 22279703 -230976880 + AT_rich Low_complexity Low_complexity 1 30 0 364 291 66 20 chr2 22281692 22281843 -230974740 - MIR SINE MIR -24 238 81 550 123 12 0 chr2 22281967 22282048 -230974535 + L1PB2 LINE L1 6023 6104 -47 939 216 51 47 chr2 22282071 22282223 -230974360 + MER2 DNA MER2_type 88 243 -102 2246 98 0 29 chr2 22282223 22282530 -230974053 + AluY SINE Alu 1 298 -13 939 216 51 47 chr2 22282530 22282631 -230973952 + MER2 DNA MER2_type 243 342 -3 3454 181 78 9 chr2 22282632 22283367 -230973216 - L1 LINE L1 -1732 4414 3630 227 277 15 31 chr2 22283531 22283596 -230972987 - MLT1I LTR MaLR -280 129 66 1813 132 33 10 chr2 22283604 22283907 -230972676 - AluSg SINE Alu 0 310 1 403 293 57 8 chr2 22284580 22284754 -230971829 - MIR SINE MIR -10 252 34 207 151 57 19 chr2 22285085 22285138 -230971445 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 916 284 94 79 chr2 22285751 22286347 -230970236 - MER77 LTR ERV1 0 605 1 272 277 125 43 chr2 22286520 22286690 -230969893 - MLT1I LTR MaLR -184 225 42 455 299 120 14 chr2 22287125 22287342 -230969241 - MIR SINE MIR -11 251 12 2386 103 16 47 chr2 22287760 22287799 -230968784 - THE1C LTR MaLR 0 375 336 2188 132 0 0 chr2 22287799 22288109 -230968474 + AluSx SINE Alu 1 310 -2 2386 103 16 47 chr2 22288109 22288456 -230968127 - THE1C LTR MaLR -39 336 1 15464 28 6 1 chr2 22288678 22291305 -230965278 + L1PA3 LINE L1 3533 6167 0 306 50 0 0 chr2 22291968 22292008 -230964575 + (TG)n Simple_repeat Simple_repeat 2 41 0 260 307 23 11 chr2 22292443 22292531 -230964052 + L2 LINE L2 2502 2590 -724 1248 138 47 63 chr2 22292531 22292785 -230963798 - MER1B DNA MER1_type 0 339 130 278 234 26 26 chr2 22292814 22292891 -230963692 + L2 LINE L2 2577 2653 -661 2260 66 10 13 chr2 22293181 22293486 -230963097 - L1PA8 LINE L1 0 6172 5869 5419 171 25 14 chr2 22293523 22294034 -230962549 - L1MA8 LINE L1 -3 6288 5784 2485 59 3 10 chr2 22294034 22294340 -230962243 - AluY SINE Alu -6 305 2 5419 171 25 14 chr2 22294340 22295685 -230960898 - L1MA8 LINE L1 -507 5784 4411 211 189 0 0 chr2 22295719 22295756 -230960827 + (CCCTAA)n Simple_repeat Simple_repeat 1 37 0 1926 178 28 3 chr2 22295802 22296157 -230960426 - THE1B LTR MaLR 0 364 1 376 194 0 0 chr2 22296181 22296253 -230960330 + L1PB1 LINE L1 129 200 -6663 1364 148 12 27 chr2 22296255 22296512 -230960071 + L1PB1 LINE L1 636 888 -5975 * 8115 204 59 39 chr2 22296509 22296796 -230959787 + L1PB1 LINE L1 3217 3497 -3365 231 211 0 39 chr2 22296796 22296848 -230959735 + LTR27 LTR ERV1 587 636 0 8115 204 59 39 chr2 22296848 22298851 -230957732 + L1PB1 LINE L1 3497 5604 -1258 1805 179 39 26 chr2 22298851 22299405 -230957178 + MLT2A2 LTR ERVL 1 554 0 4280 139 14 9 chr2 22299406 22300452 -230956131 + L1PB1 LINE L1 5601 6653 -214 24789 56 39 3 chr2 22300615 22304049 -230952534 - L1P LINE L1 -2589 3557 1 200 225 14 14 chr2 22304519 22304590 -230951993 + (TAGA)n Simple_repeat Simple_repeat 2 72 0 310 215 112 116 chr2 22304605 22304669 -230951914 - L1ME4a LINE L1 -201 5920 5857 276 30 0 0 chr2 22304669 22304702 -230951881 + (TG)n Simple_repeat Simple_repeat 2 34 0 310 215 112 116 chr2 22304702 22304792 -230951791 - L1ME4a LINE L1 -264 5857 5765 1846 124 7 25 chr2 22304792 22305067 -230951516 - AluSp SINE Alu -5 308 39 310 215 112 116 chr2 22305067 22305144 -230951439 - L1ME4a LINE L1 -356 5765 5689 194 375 23 16 chr2 22305711 22305724 -230950859 + L2 LINE L2 2851 2862 -410 387 0 0 0 chr2 22305724 22305767 -230950816 + (TG)n Simple_repeat Simple_repeat 2 44 0 194 375 23 16 chr2 22305767 22305881 -230950702 + L2 LINE L2 2862 2979 -293 210 71 0 0 chr2 22305961 22305989 -230950594 + (TG)n Simple_repeat Simple_repeat 1 28 0 1546 199 59 0 chr2 22306948 22307269 -230949314 + Tigger7 DNA MER2_type 1 340 -393 778 150 8 0 chr2 22307282 22307415 -230949168 + Tigger7 DNA MER2_type 2454 2587 0 1003 329 50 2 chr2 22307653 22308073 -230948510 + L1M2 LINE L1 11 450 -6399 10744 225 59 18 chr2 22308938 22309505 -230947078 + L1P5 LINE L1 1071 1613 -5245 2178 118 0 0 chr2 22309505 22309802 -230946781 + AluY SINE Alu 1 297 -14 10744 225 59 18 chr2 22309802 22314391 -230942192 + L1P5 LINE L1 1613 6418 -440 214 255 104 28 chr2 22314646 22314752 -230941831 - L2 LINE L2 0 3313 3200 241 296 119 63 chr2 22317401 22317560 -230939023 - MIR SINE MIR -60 202 35 3290 147 11 11 chr2 22318839 22319363 -230937220 + MER1A DNA MER1_type 4 527 0 362 284 65 60 chr2 22319625 22319826 -230936757 - LTR33 LTR ERVL -319 202 1 858 321 148 32 chr2 22319895 22320575 -230936008 + L2 LINE L2 2122 2722 -591 2128 118 65 8 chr2 22320575 22320930 -230935653 - THE1C LTR MaLR 0 375 1 7197 182 34 34 chr2 22320930 22322510 -230934073 - THE1C-int LTR MaLR 0 1580 1 2212 126 41 16 chr2 22322510 22322876 -230933707 - THE1C LTR MaLR 0 375 1 858 321 148 32 chr2 22322876 22323239 -230933344 + L2 LINE L2 2721 3312 -1 21 71 0 0 chr2 22323500 22323542 -230933041 + AT_rich Low_complexity Low_complexity 1 42 0 180 250 0 0 chr2 22324117 22324157 -230932426 + L2 LINE L2 3274 3313 0 370 312 41 7 chr2 22324445 22324596 -230931987 + MIR SINE MIR 52 206 -56 323 295 8 78 chr2 22325516 22325645 -230930938 - L2 LINE L2 -219 3053 2934 2150 130 3 0 chr2 22325864 22326165 -230930418 + AluSp SINE Alu 1 302 -11 427 328 206 23 chr2 22326332 22326972 -230929611 - L2 LINE L2 -809 2505 1749 2346 115 0 0 chr2 22327987 22328299 -230928284 + AluSx SINE Alu 1 312 0 278 304 20 20 chr2 22328471 22328573 -230928010 - MLT1I LTR MaLR -189 220 119 361 287 154 47 chr2 22328952 22329231 -230927352 + L2 LINE L2 3005 3313 0 268 82 20 20 chr2 22329720 22329769 -230926814 + (TC)n Simple_repeat Simple_repeat 2 50 0 21 36 0 0 chr2 22329992 22330020 -230926563 + AT_rich Low_complexity Low_complexity 1 28 0 2157 104 7 13 chr2 22331013 22331312 -230925271 + AluY SINE Alu 1 297 -14 348 24 0 0 chr2 22331315 22331356 -230925227 + (GA)n Simple_repeat Simple_repeat 2 42 0 285 29 0 0 chr2 22332860 22332894 -230923689 + (A)n Simple_repeat Simple_repeat 1 34 0 331 347 71 31 chr2 22333921 22334117 -230922466 + MIR SINE MIR 33 236 -26 292 93 19 19 chr2 22334774 22334828 -230921755 + (TTCC)n Simple_repeat Simple_repeat 4 57 0 325 111 16 32 chr2 22335249 22335312 -230921271 - MLT2B1 LTR ERVL 0 520 459 270 261 15 0 chr2 22335338 22335403 -230921180 + (CATA)n Simple_repeat Simple_repeat 3 68 0 6387 144 11 0 chr2 22335403 22336450 -230920133 - HSMAR2 DNA Mariner -2 1300 242 620 206 29 29 chr2 22336458 22336628 -230919955 - MLT2B1 LTR ERVL -350 170 1 237 365 61 0 chr2 22337982 22338097 -230918486 + L2 LINE L2 3183 3304 -9 2030 143 0 31 chr2 22338225 22338547 -230918036 + AluSx SINE Alu 1 312 0 1166 200 0 4 chr2 22339225 22339455 -230917128 + MSTB LTR MaLR 1 229 -197 299 164 0 30 chr2 22339455 22339522 -230917061 + CT-rich Low_complexity Low_complexity 2 66 0 1027 178 50 0 chr2 22339522 22339741 -230916842 + MSTB LTR MaLR 203 432 0 230 349 72 68 chr2 22339771 22340006 -230916577 - L2 LINE L2 -1898 1416 1181 220 360 73 0 chr2 22340631 22340781 -230915802 + L2 LINE L2 3146 3306 -7 729 204 91 42 chr2 22341294 22341558 -230915025 + L1ME3A LINE L1 5881 6157 -13 407 292 64 26 chr2 22341576 22341851 -230914732 + L1ME LINE L1 5211 5493 -671 359 277 262 0 chr2 22341851 22342057 -230914526 - MIR SINE MIR -1 261 2 340 247 72 54 chr2 22342686 22342852 -230913731 + L1MEc LINE L1 2192 2360 -4036 188 338 120 15 chr2 22343389 22343522 -230913061 - L2 LINE L2 -909 2405 2259 385 299 26 62 chr2 22343606 22343750 -230912833 - HAL1b LINE L1 -602 746 598 197 33 33 0 chr2 22343750 22343780 -230912803 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 385 299 26 62 chr2 22343780 22343978 -230912605 - HAL1b LINE L1 -750 598 421 1769 39 0 5 chr2 22343978 22344185 -230912398 + AluY SINE Alu 100 305 -6 385 299 26 62 chr2 22344185 22344293 -230912290 - HAL1b LINE L1 -927 421 311 358 208 10 40 chr2 22344357 22344458 -230912125 - MLT1J LTR MaLR -13 498 401 * 481 306 33 27 chr2 22344453 22344636 -230911947 - MLT1J LTR MaLR -233 278 95 22 56 0 0 chr2 22345353 22345389 -230911194 + AT_rich Low_complexity Low_complexity 1 36 0 2218 93 3 7 chr2 22346077 22346368 -230910215 - AluSg1 SINE Alu -19 290 1 382 309 164 5 chr2 22348093 22348294 -230908289 + MIR SINE MIR 9 241 -21 244 192 58 0 chr2 22348524 22348576 -230908007 + MER3 DNA MER1_type 36 90 -119 * 829 218 5 35 chr2 22348546 22348743 -230907840 - MER3 DNA MER1_type -13 196 6 237 297 126 0 chr2 22350296 22350407 -230906176 - Charlie8 DNA MER1_type -2215 202 78 279 302 40 24 chr2 22350592 22350718 -230905865 + MIR SINE MIR 20 147 -61 201 314 49 29 chr2 22351875 22351977 -230904606 + MIR SINE MIR 97 200 -62 488 322 49 11 chr2 22352963 22353146 -230903437 + MIR SINE MIR 4 193 -69 1757 169 0 7 chr2 22353427 22353705 -230902878 - AluJb SINE Alu -23 289 14 315 246 22 84 chr2 22354072 22354213 -230902370 + MIR SINE MIR 32 162 -46 222 321 46 46 chr2 22355939 22356070 -230900513 - MIR3 SINE MIR -41 167 37 1965 58 4 25 chr2 22357326 22357603 -230898980 + L1PA4 LINE L1 5882 6152 -3 275 141 0 42 chr2 22357636 22357707 -230898876 + L1MA7 LINE L1 6223 6290 -1 21 57 0 0 chr2 22357707 22357742 -230898841 + AT_rich Low_complexity Low_complexity 1 35 0 280 191 0 0 chr2 22357837 22357884 -230898699 - L2 LINE L2 -9 3304 3258 511 180 0 6 chr2 22357943 22358051 -230898532 - L1ME2 LINE L1 -2 6332 6073 285 253 147 27 chr2 22358409 22358559 -230898024 - MIR SINE MIR -78 184 17 195 42 0 0 chr2 22358611 22358635 -230897948 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 414 295 152 35 chr2 22359729 22360274 -230896309 + L1ME4a LINE L1 5258 5866 -255 321 270 143 32 chr2 22360688 22360814 -230895769 - MER91B DNA MER1_type -11 179 40 190 298 88 35 chr2 22361138 22361252 -230895331 + MIR SINE MIR 131 250 -12 297 0 0 0 chr2 22361573 22361606 -230894977 + (TG)n Simple_repeat Simple_repeat 2 34 0 596 40 13 0 chr2 22362560 22362636 -230893947 + L1PA10 LINE L1 6091 6167 -1 185 273 52 26 chr2 22363652 22363729 -230892854 - L2 LINE L2 -12 3260 3182 * 296 254 140 18 chr2 22363717 22363831 -230892752 - MIR SINE MIR -95 167 40 289 357 36 0 chr2 22364043 22364155 -230892428 + L2 LINE L2 3157 3272 0 1765 120 33 0 chr2 22365136 22365412 -230891171 + L1PB2 LINE L1 5864 6148 -3 427 216 94 35 chr2 22365435 22365745 -230890838 - LTR48 LTR ERV1 -1 739 284 207 167 0 0 chr2 22365963 22365999 -230890584 + (TAG)n Simple_repeat Simple_repeat 3 38 0 285 213 38 12 chr2 22367204 22367284 -230889299 + L1ME2 LINE L1 1269 1350 -5073 * 290 234 209 6 chr2 22367279 22367437 -230889146 + L1ME2 LINE L1 3097 3286 -3655 733 297 87 77 chr2 22367437 22368212 -230888371 + L1MB5 LINE L1 3 784 -5758 2959 248 38 7 chr2 22368423 22369374 -230887209 + L1MB5 LINE L1 1328 2406 -4240 5496 248 24 76 chr2 22369389 22371728 -230884855 + L1MB5 LINE L1 3238 5455 -1189 2433 171 37 4 chr2 22371728 22372218 -230884365 + L1MA5 LINE L1 5795 6300 0 1884 167 0 0 chr2 22372240 22372552 -230884031 + AluSx SINE Alu 1 312 0 3889 228 28 25 chr2 22372683 22373911 -230882672 + L1MB5 LINE L1 5441 6664 -8 4844 255 73 50 chr2 22373920 22375662 -230880921 + L1ME2 LINE L1 3268 5099 -1842 1955 128 4 4 chr2 22375662 22375966 -230880617 + AluSg SINE Alu 1 304 0 4844 255 73 50 chr2 22375966 22376943 -230879640 + L1ME2 LINE L1 5099 6052 -889 378 0 0 0 chr2 22376943 22376985 -230879598 + (TA)n Simple_repeat Simple_repeat 1 42 0 2226 243 32 61 chr2 22377088 22377936 -230878647 + L1ME2 LINE L1 6113 6935 -24 252 345 137 13 chr2 22378091 22378317 -230878266 - MIR SINE MIR -1 261 8 297 339 51 21 chr2 22378470 22378706 -230877877 + L1ME LINE L1 6212 6454 -505 342 278 46 19 chr2 22380289 22380397 -230876186 + MIR SINE MIR 81 191 -71 518 351 85 37 chr2 22380772 22381314 -230875269 + L2 LINE L2 2141 2708 -606 207 349 139 16 chr2 22381521 22381650 -230874933 + L2 LINE L2 3034 3178 -94 602 281 46 10 chr2 22382701 22382897 -230873686 + MIR SINE MIR 2 204 -58 185 170 0 113 chr2 22382923 22382947 -230873636 + MIR SINE MIR 201 217 -45 2074 133 44 22 chr2 22382947 22383314 -230873269 - THE1C LTR MaLR 0 375 1 185 170 0 113 chr2 22383314 22383342 -230873241 + MIR SINE MIR 217 247 -15 213 354 25 0 chr2 22383901 22383980 -230872603 - L2 LINE L2 -2 3270 3190 1544 158 4 8 chr2 22383982 22384229 -230872354 + AluSx SINE Alu 1 246 -66 1011 161 0 0 chr2 22384245 22384425 -230872158 + (TA)n Simple_repeat Simple_repeat 1 180 0 297 239 23 0 chr2 22384432 22384520 -230872063 - L1MC4 LINE L1 -1339 6703 6614 237 303 0 0 chr2 22384512 22384601 -230871982 + L1MC4 LINE L1 6614 6702 -1340 * 264 209 121 0 chr2 22384566 22384657 -230871926 - L1MC4 LINE L1 -1339 6703 6602 261 138 11 23 chr2 22384695 22384782 -230871801 + (TA)n Simple_repeat Simple_repeat 1 86 0 234 274 9 9 chr2 22384782 22384888 -230871695 - L1MC4 LINE L1 -1323 6719 6614 268 354 145 36 chr2 22385378 22385426 -230871157 - L2 LINE L2 -666 2648 2607 1957 225 65 54 chr2 22385426 22386057 -230870526 - LTR48B LTR ERV1 -4 640 3 268 354 145 36 chr2 22386057 22386672 -230869911 - L2 LINE L2 -707 2607 1913 4088 114 21 6 chr2 22386868 22387492 -230869091 - MER41B LTR ERV1 -2 633 1 2729 205 98 13 chr2 22388898 22389604 -230866979 - L1MC3 LINE L1 -15 7770 7005 4623 145 30 18 chr2 22389605 22390427 -230866156 + L1PB3 LINE L1 5322 6153 -1 620 141 5 174 chr2 22390435 22390648 -230865935 - L1MC3 LINE L1 -785 7000 6824 238 288 0 0 chr2 22390661 22390734 -230865849 + L1MC4 LINE L1 6624 6696 -1346 255 31 0 0 chr2 22390734 22390766 -230865817 + (TG)n Simple_repeat Simple_repeat 1 32 0 999 221 0 71 chr2 22390766 22391000 -230865583 - L1MC3 LINE L1 -977 6808 6596 1528 175 51 31 chr2 22391000 22391292 -230865291 + AluJo SINE Alu 7 304 -8 999 221 0 71 chr2 22391292 22391337 -230865246 - L1MC3 LINE L1 -1189 6596 6549 925 159 33 11 chr2 22391339 22391521 -230865062 + MSTB2 LTR MaLR 272 457 0 3620 195 37 36 chr2 22391543 22392476 -230864107 - L1MC3 LINE L1 -748 5398 5276 893 237 64 10 chr2 22392543 22392838 -230863745 - L1MC3 LINE L1 -857 5289 4979 411 224 0 9 chr2 22392859 22392975 -230863608 + CT-rich Low_complexity Low_complexity 3 117 0 722 277 75 0 chr2 22392980 22393247 -230863336 - L1MC3 LINE L1 -1213 4933 4647 180 0 0 0 chr2 22393247 22393267 -230863316 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1137 222 13 0 chr2 22393280 22393514 -230863069 - AluJb SINE Alu -43 269 33 1481 278 30 4 chr2 22393514 22394040 -230862543 - L1MC3 LINE L1 -1490 4656 4117 1238 222 27 7 chr2 22394061 22394354 -230862229 - L1MC3 LINE L1 -1999 4147 3849 718 264 19 11 chr2 22394358 22394619 -230861964 + L1MB8 LINE L1 3185 3447 -2699 1737 158 152 8 chr2 22394620 22394994 -230861589 + MSTA LTR MaLR 1 428 0 633 239 30 30 chr2 22395041 22395242 -230861341 + L1MB8 LINE L1 3636 3836 -2310 22 0 0 0 chr2 22396461 22396483 -230860100 + AT_rich Low_complexity Low_complexity 1 22 0 298 264 28 19 chr2 22396760 22396866 -230859717 - MER89-int LTR ERV1 -4454 2347 2241 38 22 0 0 chr2 22397227 22397272 -230859311 + AT_rich Low_complexity Low_complexity 1 45 0 2434 246 31 20 chr2 22397337 22398150 -230858433 + L1MB8 LINE L1 4335 5156 -990 7182 208 25 8 chr2 22398174 22399577 -230857006 + L1MA2 LINE L1 15 1441 -6124 6814 154 27 9 chr2 22399577 22401260 -230855323 + L1MA2 LINE L1 2505 4219 -3346 * 9896 159 18 14 chr2 22401257 22404191 -230852392 + L1MA2 LINE L1 4776 7723 0 2072 233 102 45 chr2 22404207 22405177 -230851406 + L1MB8 LINE L1 5150 6176 -2 3650 202 42 28 chr2 22405397 22406361 -230850222 - L1MB7 LINE L1 -21 6163 5182 1359 240 11 3 chr2 22406361 22406648 -230849935 - AluJo SINE Alu -23 289 1 3650 202 42 28 chr2 22406648 22407056 -230849527 - L1MB7 LINE L1 -1002 5182 4781 2175 112 0 3 chr2 22407357 22407652 -230848931 + AluSc SINE Alu 1 294 -15 209 270 68 0 chr2 22408855 22408929 -230847654 - MIR SINE MIR -102 160 82 258 323 21 0 chr2 22409870 22409966 -230846617 + MLT1I-int LTR MaLR 1012 1109 -262 1986 142 3 0 chr2 22411071 22411367 -230845216 + AluSx SINE Alu 1 297 -15 288 231 0 0 chr2 22411841 22411919 -230844664 + (TA)n Simple_repeat Simple_repeat 1 78 0 395 257 57 9 chr2 22412255 22412360 -230844223 - MER20 DNA MER1_type -6 213 104 237 132 0 0 chr2 22412387 22412425 -230844158 + (TA)n Simple_repeat Simple_repeat 1 38 0 280 324 27 0 chr2 22412429 22412540 -230844043 + L1MC4 LINE L1 6614 6727 -1315 235 345 36 50 chr2 22412865 22413004 -230843579 + L2 LINE L2 3177 3313 0 2095 119 6 13 chr2 22413096 22413408 -230843175 - AluY SINE Alu -1 310 1 21 36 0 0 chr2 22414401 22414429 -230842154 + AT_rich Low_complexity Low_complexity 1 28 0 268 82 20 20 chr2 22414652 22414701 -230841882 + (GA)n Simple_repeat Simple_repeat 2 50 0 393 287 154 47 chr2 22415190 22415469 -230841114 - L2 LINE L2 0 3313 3005 318 280 16 64 chr2 22415848 22415973 -230840610 + MLT1I LTR MaLR 119 237 -172 2206 125 0 0 chr2 22416118 22416429 -230840154 - AluSx SINE Alu -1 311 1 433 323 213 24 chr2 22417444 22418069 -230838514 + L2 LINE L2 1749 2491 -823 2100 127 3 0 chr2 22418251 22418551 -230838032 - AluSp SINE Alu -12 301 1 324 295 8 78 chr2 22418770 22418899 -230837684 + L2 LINE L2 2934 3053 -219 383 312 41 7 chr2 22419828 22419979 -230836604 - MIR SINE MIR -56 206 52 181 250 0 0 chr2 22420267 22420307 -230836276 - L2 LINE L2 0 3313 3274 28 48 0 0 chr2 22420883 22420925 -230835658 + AT_rich Low_complexity Low_complexity 1 42 0 1723 204 30 16 chr2 22421245 22421617 -230834966 + L1PB4 LINE L1 5751 6127 -29 1086 123 7 0 chr2 22421617 22421771 -230834812 + AluSx SINE Alu 1 155 -157 1549 111 0 40 chr2 22421796 22422022 -230834561 + AluSg SINE Alu 63 279 -31 234 105 0 0 chr2 22422051 22422089 -230834494 + L1PB4 LINE L1 6112 6149 -7 23 54 0 0 chr2 22424119 22424156 -230832427 + AT_rich Low_complexity Low_complexity 1 37 0 438 188 36 0 chr2 22424161 22424326 -230832257 + (TA)n Simple_repeat Simple_repeat 1 171 0 241 242 22 0 chr2 22425640 22425731 -230830852 + CT-rich Low_complexity Low_complexity 3 95 0 21 0 0 0 chr2 22427236 22427257 -230829326 + AT_rich Low_complexity Low_complexity 1 21 0 2223 97 0 0 chr2 22428711 22429000 -230827583 - AluSq SINE Alu -24 289 1 3063 313 70 17 chr2 22429301 22430581 -230826002 + L2 LINE L2 1249 2596 -718 691 276 154 6 chr2 22430581 22431215 -230825368 - L1ME LINE L1 -557 5607 4881 378 319 89 45 chr2 22431637 22431929 -230824654 + L1MB8 LINE L1 5260 5564 -2244 321 333 35 23 chr2 22431985 22432159 -230824424 - MIR SINE MIR -72 190 15 215 333 24 0 chr2 22433421 22433505 -230823078 - MIR SINE MIR -124 138 53 265 333 11 0 chr2 22433687 22433777 -230822806 + GA-rich Low_complexity Low_complexity 6 96 0 301 323 8 8 chr2 22434086 22434216 -230822367 - L1ME LINE L1 -469 5652 5523 351 0 0 0 chr2 22434225 22434264 -230822319 + (TA)n Simple_repeat Simple_repeat 1 39 0 21 36 0 0 chr2 22434362 22434390 -230822193 + AT_rich Low_complexity Low_complexity 1 28 0 23 78 0 0 chr2 22434488 22434539 -230822044 + AT_rich Low_complexity Low_complexity 1 51 0 253 245 116 19 chr2 22434540 22434695 -230821888 - MER69 DNA AcHobo -167 2359 2190 813 221 11 16 chr2 22434762 22434952 -230821631 + L1MB8 LINE L1 5988 6176 -2 2232 105 0 3 chr2 22434965 22435271 -230821312 + AluSx SINE Alu 1 305 -7 529 233 63 11 chr2 22435281 22435470 -230821113 - MER69 DNA AcHobo -327 2199 2001 415 304 15 0 chr2 22435517 22435652 -230820931 - MER69 DNA AcHobo -1899 627 491 4683 177 40 20 chr2 22435680 22435729 -230820854 - L1MA8 LINE L1 -10 6281 6234 1591 213 18 6 chr2 22435729 22436067 -230820516 + MER2 DNA MER2_type 1 342 -2 4683 177 40 20 chr2 22436067 22437185 -230819398 - L1MA8 LINE L1 -57 6234 5088 604 184 86 0 chr2 22437221 22437343 -230819240 - L1MA8 LINE L1 -1616 4530 4391 390 21 0 0 chr2 22437343 22437390 -230819193 + (TG)n Simple_repeat Simple_repeat 2 48 0 604 184 86 0 chr2 22437390 22437419 -230819164 - L1MA8 LINE L1 -1755 4391 4366 2694 177 29 89 chr2 22437423 22438123 -230818460 - L1 LINE L1 -1065 5263 4606 3380 177 75 18 chr2 22438196 22439083 -230817500 - L1 LINE L1 -2400 3928 2991 1243 166 136 58 chr2 22439110 22439588 -230816995 - MER4A LTR ERV1 -19 446 1 1035 229 12 8 chr2 22439588 22439832 -230816751 - L1 LINE L1 -3342 2986 2742 * 1784 262 35 12 chr2 22439826 22440401 -230816182 - L1 LINE L1 -4604 1724 1133 3982 165 31 3 chr2 22440401 22441115 -230815468 - MER50 LTR ERV1 0 734 1 1784 262 35 12 chr2 22441115 22441131 -230815452 - L1 LINE L1 -5195 1133 1119 2346 130 23 8 chr2 22441131 22441484 -230815099 - MER50-int LTR ERV1 -24 7181 6824 604 137 0 21 chr2 22441469 22441564 -230815019 - MER50-int LTR ERV1 -1010 6195 6103 * 3096 128 51 12 chr2 22441565 22442115 -230814468 - MER50-int LTR ERV1 -812 4068 3391 2893 155 6 12 chr2 22442115 22442599 -230813984 - MER50-int LTR ERV1 -3398 1482 1002 5843 149 53 12 chr2 22442617 22444320 -230812263 - MER50-int LTR ERV1 -5351 1854 1 3916 151 29 19 chr2 22444369 22445066 -230811517 - MER50 LTR ERV1 -30 704 1 606 229 23 0 chr2 22445102 22445293 -230811290 - L1 LINE L1 -4240 1088 939 235 97 90 15 chr2 22445297 22445431 -230811152 + (TA)n Simple_repeat Simple_repeat 1 144 0 809 299 119 43 chr2 22445547 22446322 -230810261 + L1ME2 LINE L1 1177 2085 -4311 1494 207 29 0 chr2 22446322 22446597 -230809986 + AluJo SINE Alu 3 285 -27 809 299 119 43 chr2 22446597 22447073 -230809510 + L1ME2 LINE L1 2085 2523 -3873 765 280 89 51 chr2 22447096 22447401 -230809182 + L1ME2 LINE L1 2543 2835 -3380 2304 85 3 7 chr2 22447401 22447708 -230808875 - AluY SINE Alu -5 306 1 765 280 89 51 chr2 22447708 22447995 -230808588 + L1ME2 LINE L1 2835 3158 -3057 216 0 0 0 chr2 22448260 22448284 -230808299 + (TA)n Simple_repeat Simple_repeat 2 25 0 2330 70 20 3 chr2 22448284 22448586 -230807997 - AluSp SINE Alu -6 307 1 1045 279 66 51 chr2 22448717 22449365 -230807218 + L1ME2 LINE L1 3622 4279 -1936 261 289 61 87 chr2 22449370 22449722 -230806861 + L1ME2 LINE L1 4881 5220 -995 1992 136 3 10 chr2 22449722 22450023 -230806560 + AluSp SINE Alu 4 302 -11 261 289 61 87 chr2 22450023 22450131 -230806452 + L1ME2 LINE L1 5220 5329 -886 887 244 31 4 chr2 22450218 22450472 -230806111 + L1ME2 LINE L1 5359 5619 -614 431 223 39 0 chr2 22450544 22450647 -230805936 + L1ME2 LINE L1 5811 5917 -318 557 222 81 9 chr2 22450649 22450870 -230805713 - L1M4 LINE L1 -777 5369 5133 918 254 30 27 chr2 22450895 22451194 -230805389 + L1ME2 LINE L1 5925 6224 -9 2504 181 33 6 chr2 22451397 22451879 -230804704 + Tigger2 DNA MER2_type 1 495 -2223 3824 170 48 19 chr2 22451881 22452716 -230803867 - L1M4 LINE L1 -1156 4990 4132 231 373 37 15 chr2 22452764 22452898 -230803685 - MIR3 SINE MIR -28 180 44 * 1444 263 46 151 chr2 22452896 22453341 -230803242 - L2 LINE L2 -502 2812 2400 403 188 134 0 chr2 22453341 22453453 -230803130 - L1M4 LINE L1 -685 5499 5373 1444 263 46 151 chr2 22453453 22453869 -230802714 - L2 LINE L2 -914 2400 1942 28 0 0 0 chr2 22454111 22454139 -230802444 + AT_rich Low_complexity Low_complexity 1 28 0 3337 228 62 27 chr2 22454230 22456005 -230800578 - L1MB7 LINE L1 -21 6163 4322 303 28 0 0 chr2 22456762 22456798 -230799785 + (TG)n Simple_repeat Simple_repeat 1 36 0 207 309 37 8 chr2 22457811 22457971 -230798612 - MIR SINE MIR -46 216 31 2203 115 0 7 chr2 22458506 22458811 -230797772 - AluSg SINE Alu -7 303 1 1812 248 82 7 chr2 22458826 22459453 -230797130 + L1MB4 LINE L1 4836 5414 -766 195 100 0 0 chr2 22459453 22459483 -230797100 + (TAA)n Simple_repeat Simple_repeat 2 31 0 1812 248 82 7 chr2 22459483 22460094 -230796489 + L1MB4 LINE L1 5414 6178 -2 22 35 0 0 chr2 22460768 22460797 -230795786 + AT_rich Low_complexity Low_complexity 1 29 0 1339 92 0 66 chr2 22461386 22461614 -230794969 + AluY SINE Alu 99 311 0 201 74 0 0 chr2 22461654 22461681 -230794902 + (TTCC)n Simple_repeat Simple_repeat 4 30 0 855 131 0 0 chr2 22461744 22461881 -230794702 + (TCCC)n Simple_repeat Simple_repeat 3 139 0 222 118 0 0 chr2 22461944 22461978 -230794605 + (TCCC)n Simple_repeat Simple_repeat 3 36 0 1690 278 112 3 chr2 22462076 22462824 -230793759 - L1MB7 LINE L1 -1985 4161 3332 3326 253 66 9 chr2 22462831 22463448 -230793135 - L1MC3 LINE L1 -7 7778 7081 2114 142 31 19 chr2 22463448 22463808 -230792775 + THE1B LTR MaLR 1 364 0 3326 253 66 9 chr2 22463808 22464185 -230792398 - L1MC3 LINE L1 -704 7081 6727 675 301 69 19 chr2 22464223 22464642 -230791941 - L1MEc LINE L1 -4258 2138 1699 1446 214 55 16 chr2 22464683 22465047 -230791536 - L1M4 LINE L1 -540 5703 5326 21 0 0 0 chr2 22465075 22465096 -230791487 + AT_rich Low_complexity Low_complexity 1 21 0 1768 295 67 40 chr2 22465099 22466612 -230789971 - L1MEc LINE L1 -4814 1401 45 2002 140 44 16 chr2 22466614 22466979 -230789604 - THE1C LTR MaLR 0 375 1 1812 177 51 24 chr2 22467113 22467596 -230788987 + MLT2A2 LTR ERVL 1 500 -54 248 207 98 0 chr2 22467674 22467756 -230788827 + L1MC4 LINE L1 6614 6703 -1339 198 209 0 0 chr2 22467761 22467804 -230788779 + (TATATG)n Simple_repeat Simple_repeat 2 44 0 229 250 71 0 chr2 22467804 22467888 -230788695 + L1MC4 LINE L1 6614 6703 -1339 788 212 8 8 chr2 22467888 22468143 -230788440 + (TATATG)n Simple_repeat Simple_repeat 1 255 0 235 247 26 0 chr2 22468143 22468220 -230788363 + L1MCa LINE L1 2006 2084 -4342 182 0 105 0 chr2 22468256 22468294 -230788289 + (TA)n Simple_repeat Simple_repeat 1 42 0 1015 258 106 58 chr2 22468301 22468931 -230787652 - L1ME LINE L1 -439 5723 5071 1690 228 24 40 chr2 22468956 22469389 -230787194 - MLT2B2 LTR ERVL 0 397 1 1128 285 136 36 chr2 22469412 22469512 -230787071 - L1ME LINE L1 -1156 4990 4901 2347 73 0 55 chr2 22469512 22469839 -230786744 - AluSc SINE Alu 0 309 1 1128 285 136 36 chr2 22469839 22470758 -230785825 - L1ME LINE L1 -1245 4901 3869 21 0 0 0 chr2 22470886 22470907 -230785676 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 22471491 22471514 -230785069 + AT_rich Low_complexity Low_complexity 1 23 0 2039 170 62 79 chr2 22471986 22472533 -230784050 - L1MA10 LINE L1 -8 6326 5789 3095 104 143 138 chr2 22473271 22474565 -230782018 + pTR5 LTR ERV1 827 2438 0 499 203 262 0 chr2 22476087 22476154 -230780429 - MER46A DNA MER2_type -2495 236 188 1585 151 12 12 chr2 22476154 22476412 -230780171 + AluSx SINE Alu 44 301 -11 499 203 262 0 chr2 22476412 22476531 -230780052 - MER46A DNA MER2_type -2543 188 1 23 33 0 0 chr2 22477573 22477603 -230778980 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr2 22477788 22477811 -230778772 + AT_rich Low_complexity Low_complexity 1 23 0 1973 128 67 20 chr2 22478998 22479356 -230777227 + THE1C LTR MaLR 1 375 0 264 391 106 21 chr2 22479526 22480245 -230776338 + L2 LINE L2 854 1633 -1681 297 291 44 50 chr2 22480640 22480822 -230775761 + L2 LINE L2 1978 2158 -1156 637 209 6 55 chr2 22482010 22482146 -230774437 - AluJo/FRAM SINE Alu -18 294 166 2033 70 4 33 chr2 22482146 22482417 -230774166 + AluY SINE Alu 34 296 -15 637 209 6 55 chr2 22482417 22482443 -230774140 - AluJo/FRAM SINE Alu -146 166 140 278 180 16 0 chr2 22482458 22482519 -230774064 + (TA)n Simple_repeat Simple_repeat 2 63 0 297 0 0 0 chr2 22482522 22482555 -230774028 + (CA)n Simple_repeat Simple_repeat 2 34 0 399 326 49 33 chr2 22483167 22483351 -230773232 + L3 LINE CR1 922 1108 -469 27 29 0 0 chr2 22483837 22483871 -230772712 + AT_rich Low_complexity Low_complexity 1 34 0 291 175 0 0 chr2 22484151 22484208 -230772375 + (TATG)n Simple_repeat Simple_repeat 3 59 0 26 30 0 0 chr2 22484614 22484647 -230771936 + AT_rich Low_complexity Low_complexity 1 33 0 22 80 0 0 chr2 22485124 22485174 -230771409 + AT_rich Low_complexity Low_complexity 1 50 0 243 0 0 0 chr2 22486814 22486841 -230769742 + (TC)n Simple_repeat Simple_repeat 2 28 0 345 47 0 0 chr2 22486855 22486898 -230769685 + (GA)n Simple_repeat Simple_repeat 1 43 0 336 24 0 0 chr2 22487767 22487808 -230768775 + (CA)n Simple_repeat Simple_repeat 1 41 0 614 385 64 19 chr2 22488282 22488765 -230767818 + L3 LINE CR1 1071 1575 -2 22 35 0 0 chr2 22488847 22488876 -230767707 + AT_rich Low_complexity Low_complexity 1 29 0 745 296 39 35 chr2 22489094 22489405 -230767178 + ERVL LTR ERVL 1101 1412 -3584 333 250 0 38 chr2 22489645 22489725 -230766858 + ERVL LTR ERVL 1756 1832 -3164 471 204 102 12 chr2 22489745 22489912 -230766671 + MER53 DNA DNA 8 189 0 524 338 75 24 chr2 22489915 22490208 -230766375 + ERVL LTR ERVL 1968 2275 -2721 2017 266 64 26 chr2 22490209 22491001 -230765582 + L1MB5 LINE L1 4017 4838 -1308 1754 185 37 87 chr2 22491001 22491096 -230765487 + MLT1C LTR MaLR 1 99 -368 1819 181 44 16 chr2 22491096 22491461 -230765122 - THE1C LTR MaLR 0 375 1 1754 185 37 87 chr2 22491461 22491857 -230764726 + MLT1C LTR MaLR 99 467 0 3605 217 80 3 chr2 22491857 22493078 -230763505 + L1MB5 LINE L1 4834 6157 -17 24 53 0 0 chr2 22493081 22493119 -230763464 + AT_rich Low_complexity Low_complexity 1 38 0 2248 329 19 8 chr2 22493119 22493981 -230762602 + ERVL LTR ERVL 2285 3020 -1976 744 324 42 43 chr2 22493990 22494607 -230761976 + ERVL LTR ERVL 3131 3535 -1461 675 336 59 23 chr2 22494746 22495140 -230761443 + ERVL LTR ERVL 4039 4481 -1283 500 315 14 18 chr2 22495251 22495470 -230761113 + ERVL LTR ERVL 4665 4882 -603 683 333 35 31 chr2 22495611 22496067 -230760516 + ERVL LTR ERVL 4887 5344 -310 359 325 73 7 chr2 22496187 22496338 -230760245 + LTR16B LTR ERVL 1 161 -303 247 333 75 0 chr2 22496580 22496673 -230759910 + L1M4 LINE L1 5486 5585 -579 226 301 115 6 chr2 22497603 22497759 -230758824 + L1M4 LINE L1 5690 5862 -316 310 128 0 0 chr2 22497806 22497853 -230758730 - MADE1 DNA Mariner 0 80 34 4949 171 38 10 chr2 22498051 22499058 -230757525 - L1MA8 LINE L1 -17 6274 5231 628 226 75 44 chr2 22499059 22499218 -230757365 + FRAM SINE Alu 1 164 -12 5133 191 36 25 chr2 22499218 22500048 -230756535 - L1MA8 LINE L1 -909 5237 4388 189 0 0 0 chr2 22500048 22500069 -230756514 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 5133 191 36 25 chr2 22500069 22500446 -230756137 - L1MA8 LINE L1 -1758 4388 4017 1964 123 67 58 chr2 22500446 22500876 -230755707 + L1MA4 LINE L1 5866 6299 -1 1360 206 88 31 chr2 22500876 22501352 -230755231 + L1 LINE L1 3041 3543 -2603 1535 147 16 0 chr2 22551352 22551604 -230704979 + MER44D DNA MER2_type 294 604 -1 22 80 0 0 chr2 22551706 22551756 -230704827 + AT_rich Low_complexity Low_complexity 1 50 0 681 253 91 97 chr2 22551763 22552281 -230704302 + MLT1H LTR MaLR 8 522 -27 210 238 60 24 chr2 22552348 22552432 -230704151 - MIR SINE MIR -56 206 120 443 307 26 40 chr2 22552662 22552782 -230703801 - MER102b DNA MER1_type -1090 338 221 2384 94 3 0 chr2 22552782 22553091 -230703492 + AluSp SINE Alu 3 312 -1 443 307 26 40 chr2 22553091 22553198 -230703385 - MER102b DNA MER1_type -1207 221 114 825 161 7 0 chr2 22553326 22553463 -230703120 + FLAM_C SINE Alu 1 138 -5 2143 131 3 0 chr2 22555224 22555529 -230701054 + AluSg SINE Alu 1 306 -4 213 175 0 0 chr2 22555896 22555936 -230700647 + (TG)n Simple_repeat Simple_repeat 1 40 0 246 136 121 0 chr2 22556670 22556736 -230699847 - L1MA7 LINE L1 -2 6289 6216 591 218 8 8 chr2 22556951 22557075 -230699508 - L2 LINE L2 0 3313 3190 1424 204 33 41 chr2 22557203 22557571 -230699012 + MLT1A1 LTR MaLR 1 365 0 258 323 123 13 chr2 22557680 22557835 -230698748 + MIR SINE MIR 50 221 -41 466 248 99 8 chr2 22558212 22558333 -230698250 + L2 LINE L2 3137 3268 -4 2141 147 0 0 chr2 22558570 22558882 -230697701 - AluSx SINE Alu 0 312 1 256 312 0 65 chr2 22559865 22559958 -230696625 - L2 LINE L2 -2 3311 3225 363 44 0 0 chr2 22560154 22560199 -230696384 + (TG)n Simple_repeat Simple_repeat 1 45 0 294 106 0 0 chr2 22560199 22560246 -230696337 + (GA)n Simple_repeat Simple_repeat 2 48 0 257 271 29 0 chr2 22560802 22560872 -230695711 + L1ME3 LINE L1 6062 6133 -29 2038 140 0 0 chr2 22561736 22562022 -230694561 + AluSx SINE Alu 3 288 -24 396 179 0 0 chr2 22562817 22562895 -230693688 + (TA)n Simple_repeat Simple_repeat 1 78 0 1719 248 68 7 chr2 22563196 22563652 -230692931 + MER119 DNA MER1_type 1 484 -99 381 324 45 80 chr2 22564699 22565076 -230691507 + L2 LINE L2 2127 2490 -824 270 365 78 9 chr2 22566301 22566416 -230690167 + L2 LINE L2 3129 3251 -21 26 64 0 0 chr2 22566952 22566999 -230689584 + AT_rich Low_complexity Low_complexity 1 47 0 458 310 32 7 chr2 22567497 22567652 -230688931 - MIR SINE MIR -54 208 50 26 30 0 0 chr2 22570054 22570087 -230686496 + AT_rich Low_complexity Low_complexity 1 33 0 2514 71 3 0 chr2 22570481 22570791 -230685792 + AluY SINE Alu 1 311 0 21 36 0 0 chr2 22572212 22572240 -230684343 + AT_rich Low_complexity Low_complexity 1 28 0 580 235 37 27 chr2 22574075 22574370 -230682213 + MLT1I LTR MaLR 79 392 -17 279 212 0 0 chr2 22575453 22575519 -230681064 - MER116 DNA Mariner -9 71 6 252 0 0 0 chr2 22575804 22575832 -230680751 + (A)n Simple_repeat Simple_repeat 1 28 0 869 183 52 92 chr2 22576182 22576411 -230680172 + Tigger5 DNA MER2_type 1 220 -2103 * 1729 138 4 0 chr2 22576403 22576671 -230679912 + Tigger5 DNA MER2_type 2054 2322 -1 445 321 144 23 chr2 22577785 22578221 -230678362 - L1MEd LINE L1 -2563 3566 3078 361 245 172 81 chr2 22578222 22578483 -230678100 + MLT1E2 LTR MaLR 1 285 -341 581 286 104 58 chr2 22578825 22579413 -230677170 - L1MEd LINE L1 -5041 1078 464 2228 114 0 16 chr2 22579762 22580070 -230676513 - AluSg SINE Alu -7 303 1 458 317 35 15 chr2 22580101 22580300 -230676283 + L2 LINE L2 3111 3313 0 244 298 36 0 chr2 22580306 22580390 -230676193 + (CATA)n Simple_repeat Simple_repeat 2 88 0 286 284 162 27 chr2 22580969 22581117 -230675466 + MIR3 SINE MIR 31 198 -10 471 259 6 29 chr2 22581697 22581867 -230674716 + L1M4 LINE L1 3272 3437 -2709 201 369 36 18 chr2 22582471 22582582 -230674001 + MIR SINE MIR 4 116 -146 234 81 0 0 chr2 22582641 22582678 -230673905 + (TA)n Simple_repeat Simple_repeat 2 38 0 1198 164 38 0 chr2 22583395 22583608 -230672975 + Tigger2 DNA MER2_type 2498 2718 0 1331 245 33 27 chr2 22583656 22584024 -230672559 + MLT1A2 LTR MaLR 5 374 0 184 77 51 0 chr2 22587226 22587265 -230669318 + A-rich Low_complexity Low_complexity 2 42 0 375 202 25 17 chr2 22590366 22590485 -230666098 + GA-rich Low_complexity Low_complexity 4 123 0 459 290 36 24 chr2 22590700 22590948 -230665635 - L1MEd LINE L1 -4923 1196 946 4346 148 73 14 chr2 22590976 22591758 -230664825 - L1PA16 LINE L1 0 6166 5339 2080 115 7 0 chr2 22591758 22592053 -230664530 + AluSc SINE Alu 1 297 -12 427 91 39 0 chr2 22592053 22592130 -230664453 + GA-rich Low_complexity Low_complexity 4 83 0 537 129 63 12 chr2 22592141 22592276 -230664307 - L1 LINE L1 -795 5351 5211 1737 181 122 13 chr2 22592381 22592767 -230663816 + MSTA LTR MaLR 1 428 0 2448 71 0 0 chr2 22592990 22593286 -230663297 + AluY SINE Alu 1 296 -15 234 286 29 9 chr2 22594064 22594169 -230662414 - L1MCa LINE L1 -4581 1845 1739 2446 118 39 15 chr2 22594444 22594833 -230661750 - MER48 LTR ERV1 0 398 1 480 292 52 77 chr2 22594910 22595406 -230661177 - L1MCa LINE L1 -5013 1403 920 256 273 99 37 chr2 22595712 22595873 -230660710 - L1MCa LINE L1 -5890 526 356 23 0 0 0 chr2 22596511 22596534 -230660049 + AT_rich Low_complexity Low_complexity 1 23 0 756 251 18 44 chr2 22597157 22597384 -230659199 + MER58A DNA MER1_type 3 223 -1 1011 287 77 8 chr2 22597506 22597868 -230658715 + MLT1I LTR MaLR 1 387 -22 586 301 113 10 chr2 22598547 22599062 -230657521 + L1ME4a LINE L1 5526 6093 -28 204 283 35 9 chr2 22599136 22599249 -230657334 + (TA)n Simple_repeat Simple_repeat 2 117 0 5317 114 2 14 chr2 22599378 22600175 -230656408 - L1PA15 LINE L1 -9 6156 5369 27 96 0 0 chr2 22600341 22600424 -230656159 + AT_rich Low_complexity Low_complexity 1 83 0 1133 211 13 50 chr2 22600425 22600728 -230655855 - L1MA10 LINE L1 -13 6321 6030 186 300 0 0 chr2 22600729 22600779 -230655804 + L2 LINE L2 2709 2758 -556 469 236 0 9 chr2 22600974 22601080 -230655503 - L1PB4 LINE L1 -26 6130 6026 314 292 70 16 chr2 22601739 22601924 -230654659 - L1ME LINE L1 -321 5800 5606 236 189 75 0 chr2 22602448 22602501 -230654082 - MER68 LTR ERV1 -31 531 475 25 31 0 0 chr2 22603237 22603269 -230653314 + AT_rich Low_complexity Low_complexity 1 32 0 32 26 0 0 chr2 22603814 22603853 -230652730 + AT_rich Low_complexity Low_complexity 1 39 0 697 243 88 4 chr2 22603932 22604158 -230652425 - LTR37B LTR ERV1 0 468 224 1963 114 57 4 chr2 22604389 22604670 -230651913 + AluSx SINE Alu 1 296 -16 225 274 0 20 chr2 22604900 22604951 -230651632 - L2 LINE L2 -6 3266 3217 1954 135 4 0 chr2 22606017 22606298 -230650285 + AluSx SINE Alu 14 295 -17 180 348 128 68 chr2 22606814 22607064 -230649519 - L2 LINE L2 -82 3190 2926 3537 175 46 23 chr2 22608120 22609121 -230647462 - L1MA7 LINE L1 -258 6033 5013 802 268 49 25 chr2 22609135 22609378 -230647205 - MIR SINE MIR -8 254 6 7025 61 27 0 chr2 22609593 22610621 -230645962 - L1PA8 LINE L1 -1 6171 5139 233 377 23 23 chr2 22610662 22610792 -230645791 - MIR SINE MIR -126 136 7 627 354 93 42 chr2 22612129 22612982 -230643601 - L2 LINE L2 -457 2857 1962 338 204 11 0 chr2 22613079 22613172 -230643411 + GA-rich Low_complexity Low_complexity 6 99 0 3397 195 43 65 chr2 22614179 22615089 -230641494 - L1MC1 LINE L1 0 7764 6137 26 50 0 0 chr2 22615196 22615236 -230641347 + AT_rich Low_complexity Low_complexity 1 40 0 1431 36 6 10 chr2 22615344 22615593 -230640990 + L1PA3 LINE L1 5955 6176 0 704 344 126 44 chr2 22615829 22616819 -230639764 + L1ME LINE L1 3 1073 -5046 927 265 57 43 chr2 22616898 22617522 -230639061 + L1ME3A LINE L1 5144 5777 -393 399 274 22 34 chr2 22617549 22617728 -230638855 + L1ME3A LINE L1 5851 6028 -135 478 309 91 17 chr2 22617744 22618094 -230638489 + L1ME LINE L1 4357 4732 -1397 229 263 124 21 chr2 22618201 22618395 -230638188 + L1ME LINE L1 4911 5124 -1005 575 272 138 19 chr2 22618655 22618975 -230637608 + L1ME LINE L1 5419 5776 -369 279 0 0 0 chr2 22621695 22621726 -230634857 + (CA)n Simple_repeat Simple_repeat 2 32 0 33 73 0 0 chr2 22621726 22621794 -230634789 + AT_rich Low_complexity Low_complexity 1 68 0 198 0 0 0 chr2 22621800 22621822 -230634761 + (TA)n Simple_repeat Simple_repeat 1 22 0 194 328 40 80 chr2 22621854 22621979 -230634604 - MER5A DNA MER1_type -68 121 2 420 394 20 5 chr2 22622125 22622328 -230634255 + MIR SINE MIR 2 207 -55 24 53 0 0 chr2 22623027 22623065 -230633518 + AT_rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr2 22623473 22623496 -230633087 + AT_rich Low_complexity Low_complexity 1 23 0 1925 108 0 0 chr2 22624560 22624811 -230631772 + AluSq SINE Alu 1 251 -62 455 316 88 10 chr2 22625039 22625232 -230631351 + MIR SINE MIR 31 238 -24 193 215 13 13 chr2 22625364 22625443 -230631140 + (TTTA)n Simple_repeat Simple_repeat 4 82 0 282 136 0 0 chr2 22625537 22625581 -230631002 + L2 LINE L2 3269 3312 -1 183 42 0 0 chr2 22625975 22625999 -230630584 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1373 144 74 41 chr2 22626002 22626272 -230630311 - AluJb SINE Alu -33 279 1 31 0 0 0 chr2 22626717 22626748 -230629835 + AT_rich Low_complexity Low_complexity 1 31 0 950 128 156 0 chr2 22626748 22626928 -230629655 - L1MA2 LINE L1 -2 6302 6095 2325 91 0 0 chr2 22627138 22627425 -230629158 + AluSg SINE Alu 1 287 -23 243 0 0 0 chr2 22627426 22627453 -230629130 + (TTAA)n Simple_repeat Simple_repeat 2 28 0 617 338 123 41 chr2 22627476 22627686 -230628897 + L2 LINE L2 2134 2325 -989 2155 136 0 0 chr2 22627686 22627996 -230628587 + AluSx SINE Alu 1 310 -2 617 338 123 41 chr2 22627996 22628475 -230628108 + L2 LINE L2 2325 2880 -434 1230 289 73 24 chr2 22628599 22629233 -230627350 - HAL1 LINE L1 -162 2345 1681 1995 235 21 14 chr2 22629267 22629778 -230626805 - MER90 LTR ERV1 -99 515 1 648 287 116 68 chr2 22629785 22630894 -230625689 - HAL1 LINE L1 -1245 1262 101 212 330 134 50 chr2 22631001 22631103 -230625480 + L3 LINE CR1 238 330 -1247 2178 111 0 26 chr2 22631103 22631410 -230625173 + AluSq SINE Alu 1 299 -14 2168 98 0 29 chr2 22631410 22631716 -230624867 + AluY SINE Alu 1 297 -14 212 330 134 50 chr2 22631716 22631851 -230624732 + L3 LINE CR1 329 496 -1081 360 315 123 19 chr2 22631858 22632020 -230624563 + MIR SINE MIR 12 190 -72 745 161 8 0 chr2 22632196 22632314 -230624269 + 5S rRNA rRNA 1 119 -2 2866 22 0 0 chr2 22633362 22633678 -230622905 - AluYb8 SINE Alu -2 316 1 191 323 0 48 chr2 22636276 22636338 -230620245 - L2 LINE L2 -63 3209 3151 330 376 24 37 chr2 22636375 22636653 -230619930 + L2 LINE L2 2728 3010 -262 581 266 305 25 chr2 22636830 22637278 -230619305 + MLT1H LTR MaLR 20 557 -10 514 255 127 45 chr2 22638500 22638564 -230618019 - MLT1H LTR MaLR -1 548 491 1751 166 26 10 chr2 22638564 22638871 -230617712 + AluJb SINE Alu 1 312 0 514 255 127 45 chr2 22638871 22639039 -230617544 - MLT1H LTR MaLR -58 491 320 2044 136 0 16 chr2 22639279 22639587 -230616996 - AluSx SINE Alu 0 312 10 218 345 191 0 chr2 22639801 22639911 -230616672 - MIR SINE MIR -128 134 4 539 228 53 23 chr2 22639986 22640157 -230616426 + MER104 DNA MER2_type 4 179 -1 1957 153 22 30 chr2 22641085 22641452 -230615131 + THE1B LTR MaLR 1 364 0 11595 97 4 11 chr2 22641452 22641961 -230614622 + THE1B-int LTR MaLR 1 512 -1068 2304 116 0 0 chr2 22641961 22642272 -230614311 + AluY SINE Alu 1 311 0 11595 97 4 11 chr2 22642272 22643353 -230613230 + THE1B-int LTR MaLR 512 1580 0 1958 150 19 46 chr2 22643353 22643726 -230612857 + THE1B LTR MaLR 1 363 -1 1244 96 0 0 chr2 22644672 22644838 -230611745 + AluSg/x SINE Alu 142 307 -3 255 303 35 27 chr2 22644851 22644974 -230611609 - MER5A DNA MER1_type -52 137 4 188 359 0 0 chr2 22645074 22645127 -230611456 + L2 LINE L2 3219 3271 -1 276 273 67 53 chr2 22646453 22646603 -230609980 - L2 LINE L2 -124 3189 3038 189 235 0 0 chr2 22646707 22646741 -230609842 - L2 LINE L2 -83 3189 3156 350 351 28 83 chr2 22647091 22647416 -230609167 - L2 LINE L2 0 3272 2966 317 250 54 11 chr2 22647807 22647899 -230608684 - MIR SINE MIR -128 134 39 347 344 31 12 chr2 22649553 22649713 -230606870 + MIR SINE MIR 28 190 -72 234 305 9 48 chr2 22650141 22650246 -230606337 + MIR SINE MIR 103 203 -59 358 353 74 7 chr2 22651011 22651239 -230605344 + MIR SINE MIR 21 262 0 248 0 0 30 chr2 22651244 22651277 -230605306 + (TTA)n Simple_repeat Simple_repeat 1 32 0 459 92 0 0 chr2 22651355 22651420 -230605163 + (CA)n Simple_repeat Simple_repeat 1 65 0 294 255 0 53 chr2 22651739 22651833 -230604750 + LTR33A LTR ERVL 412 500 -23 21 57 0 0 chr2 22652215 22652250 -230604333 + AT_rich Low_complexity Low_complexity 1 35 0 1992 136 3 6 chr2 22654885 22655202 -230601381 + L1PA15 LINE L1 5847 6162 -3 287 298 10 39 chr2 22655418 22655522 -230601061 + MIR SINE MIR 40 140 -122 1940 170 96 19 chr2 22655523 22655941 -230600642 - MER66A LTR ERV1 0 478 29 1765 185 3 16 chr2 22657612 22657926 -230598657 - AluJo SINE Alu -2 310 1 1691 173 83 25 chr2 22658638 22659036 -230597547 + MER66B LTR ERV1 3 423 -63 188 184 20 0 chr2 22659870 22659919 -230596664 + (TA)n Simple_repeat Simple_repeat 1 50 0 1965 150 7 78 chr2 22660559 22660972 -230595611 + MLT1B LTR MaLR 7 390 0 201 195 0 0 chr2 22662593 22662634 -230593949 + (TA)n Simple_repeat Simple_repeat 2 42 0 324 0 0 0 chr2 22664029 22664065 -230592518 + (A)n Simple_repeat Simple_repeat 1 36 0 1674 277 49 38 chr2 22667038 22667855 -230588728 - L1ME3A LINE L1 -5 6165 5340 442 262 51 33 chr2 22667866 22668141 -230588442 - L1M4 LINE L1 -748 5398 5119 258 224 48 109 chr2 22668291 22668438 -230588145 - MIR SINE MIR -25 237 100 364 264 8 49 chr2 22668835 22669065 -230587518 + GA-rich Low_complexity Low_complexity 1 220 0 345 284 90 15 chr2 22669065 22669199 -230587384 + MIR SINE MIR 63 206 -56 21 36 0 0 chr2 22672624 22672652 -230583931 + AT_rich Low_complexity Low_complexity 1 28 0 194 260 80 0 chr2 22672873 22672923 -230583660 - L2 LINE L2 -1 3312 3259 5696 119 61 88 chr2 22673589 22674827 -230581756 + Tigger3b DNA MER2_type 28 1231 0 1367 219 16 33 chr2 22675462 22675828 -230580755 - MLT1C LTR MaLR -52 415 56 222 299 11 58 chr2 22676577 22676664 -230579919 + MIR SINE MIR 33 115 -93 187 237 65 86 chr2 22676996 22677089 -230579494 - L2 LINE L2 -9 3304 3214 438 335 66 0 chr2 22678485 22678637 -230577946 - L2 LINE L2 0 3272 3111 235 319 104 42 chr2 22678685 22678945 -230577638 + L2 LINE L2 1807 2082 -1232 1837 190 19 27 chr2 22680168 22680536 -230576047 + MLT1A1 LTR MaLR 1 365 0 265 211 29 115 chr2 22680597 22680701 -230575882 - MLT1H LTR MaLR 0 549 455 387 0 0 0 chr2 22681515 22681558 -230575025 + (TAAA)n Simple_repeat Simple_repeat 4 46 0 297 0 0 0 chr2 22681560 22681593 -230574990 + (TG)n Simple_repeat Simple_repeat 2 34 0 275 208 0 0 chr2 22683279 22683327 -230573256 - L2 LINE L2 -4 3309 3262 233 130 43 0 chr2 22683818 22683864 -230572719 + CT-rich Low_complexity Low_complexity 3 50 0 2628 234 71 23 chr2 22685440 22686148 -230570435 - MER21B LTR ERV1 -105 758 17 1846 85 19 4 chr2 22686332 22686590 -230569993 + L1PA14 LINE L1 5900 6161 0 * 10354 32 1 10 chr2 22686588 22688608 -230567975 + L1PA4 LINE L1 4143 6155 0 1789 142 92 19 chr2 22688611 22688971 -230567612 + LTR49 LTR ERV1 134 519 -76 21 0 0 0 chr2 22689278 22689299 -230567284 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 22689396 22689421 -230567162 + AT_rich Low_complexity Low_complexity 1 25 0 8384 215 24 8 chr2 22689579 22691706 -230564877 - L1 LINE L1 -841 5305 3143 362 329 57 35 chr2 22692481 22692709 -230563874 - L1M4 LINE L1 -1283 4863 4631 39 0 0 0 chr2 22692714 22692753 -230563830 + AT_rich Low_complexity Low_complexity 1 39 0 252 337 84 32 chr2 22694742 22694932 -230561651 - L2 LINE L2 -113 3200 3001 189 0 0 0 chr2 22694950 22694971 -230561612 + (GGGGA)n Simple_repeat Simple_repeat 1 21 0 3266 95 12 12 chr2 22695206 22695688 -230560895 + L1PB1 LINE L1 5663 6144 -7 24 53 0 0 chr2 22696445 22696483 -230560100 + AT_rich Low_complexity Low_complexity 1 38 0 1596 295 86 69 chr2 22696592 22698064 -230558519 - L2 LINE L2 0 3313 1815 25 0 0 0 chr2 22698256 22698281 -230558302 + AT_rich Low_complexity Low_complexity 1 25 0 206 237 13 0 chr2 22698301 22698377 -230558206 + (TA)n Simple_repeat Simple_repeat 2 78 0 2276 107 7 0 chr2 22698430 22698740 -230557843 + AluSq SINE Alu 1 312 -1 799 294 37 47 chr2 22698976 22699567 -230557016 - L1ME3 LINE L1 -279 5883 5299 386 278 0 10 chr2 22701265 22701362 -230555221 - MIR SINE MIR -21 241 146 801 335 97 5 chr2 22701376 22701809 -230554774 + LTR33 LTR ERVL 38 510 -11 529 294 15 0 chr2 22701815 22701951 -230554632 - MIR SINE MIR -124 138 1 892 186 101 36 chr2 22704428 22704649 -230551934 + MER33 DNA MER1_type 5 245 -2340 2110 137 3 0 chr2 22704649 22704949 -230551634 - AluSx SINE Alu -11 301 1 892 186 101 36 chr2 22704949 22704974 -230551609 + MER33 DNA MER1_type 245 267 -57 186 307 51 73 chr2 22705780 22705917 -230550666 + L2 LINE L2 2546 2679 -635 419 371 84 23 chr2 22706397 22706836 -230549747 + L2 LINE L2 2511 2976 -338 321 26 0 0 chr2 22710527 22710565 -230546018 + (TA)n Simple_repeat Simple_repeat 2 39 0 2283 113 0 13 chr2 22710565 22710876 -230545707 - AluSg SINE Alu -3 307 1 458 298 13 20 chr2 22711041 22711192 -230545391 + MIR SINE MIR 95 244 -18 1636 122 24 32 chr2 22713155 22713402 -230543181 + AluSc SINE Alu 1 245 -64 236 173 0 0 chr2 22713522 22713574 -230543009 - L1MC4 LINE L1 -1339 6703 6652 197 206 294 11 chr2 22713831 22713923 -230542660 + MER5A DNA MER1_type 40 157 -32 * 358 148 34 45 chr2 22713857 22713945 -230542638 - MER5A DNA MER1_type -77 112 26 181 309 25 49 chr2 22714098 22714179 -230542404 + L2 LINE L2 2586 2664 -650 180 152 0 0 chr2 22714188 22714221 -230542362 + (TTA)n Simple_repeat Simple_repeat 2 34 0 258 250 0 0 chr2 22714223 22714279 -230542304 - MIR SINE MIR -27 235 180 241 333 19 9 chr2 22714854 22714962 -230541621 + MER110 LTR ERV1 298 406 -85 2257 218 43 34 chr2 22714962 22715134 -230541449 + L1MA9 LINE L1 5612 5781 -531 347 0 23 0 chr2 22715134 22715177 -230541406 + (TAGA)n Simple_repeat Simple_repeat 4 47 0 2257 218 43 34 chr2 22715177 22715661 -230540922 + L1MA9 LINE L1 5781 6274 -38 385 240 21 10 chr2 22715777 22715873 -230540710 + MER110 LTR ERV1 393 489 -2 207 167 0 0 chr2 22715986 22716022 -230540561 + GA-rich Low_complexity Low_complexity 1 36 0 204 350 86 8 chr2 22717016 22717133 -230539450 + L2 LINE L2 3146 3271 -1 22 35 0 0 chr2 22717399 22717428 -230539155 + AT_rich Low_complexity Low_complexity 1 29 0 195 188 0 0 chr2 22718042 22718090 -230538493 + (TATG)n Simple_repeat Simple_repeat 2 49 0 180 111 0 0 chr2 22718101 22718128 -230538455 + (TA)n Simple_repeat Simple_repeat 1 27 0 215 254 17 0 chr2 22718142 22718201 -230538382 + (TATG)n Simple_repeat Simple_repeat 2 61 0 466 283 131 5 chr2 22718302 22718500 -230538083 - MIR SINE MIR -6 256 34 408 288 18 59 chr2 22718498 22718668 -230537915 + L2 LINE L2 3147 3309 -4 * 305 336 28 9 chr2 22719546 22719653 -230536930 - MER5A DNA MER1_type -45 144 36 1135 203 7 27 chr2 22721304 22721600 -230534983 + L1MA4 LINE L1 6011 6300 0 2058 200 59 15 chr2 22722779 22723010 -230533573 - LOR1a LTR ERV1 0 497 278 1843 133 0 0 chr2 22723010 22723274 -230533309 + AluSx SINE Alu 35 298 -14 2058 200 59 15 chr2 22723274 22723518 -230533065 - LOR1a LTR ERV1 -219 278 1 1645 186 25 35 chr2 22725281 22725685 -230530898 + L1MA7 LINE L1 5885 6284 -7 183 42 0 0 chr2 22725932 22725956 -230530627 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 186 314 119 17 chr2 22726263 22726381 -230530202 - MIR3 SINE MIR -66 142 13 205 299 68 41 chr2 22726698 22726845 -230529738 + L2 LINE L2 3163 3313 0 569 280 111 69 chr2 22727352 22727731 -230528852 + L2 LINE L2 2915 3309 -4 191 381 103 0 chr2 22728416 22728513 -230528070 - L2 LINE L2 -221 3051 2945 406 274 94 33 chr2 22728990 22729202 -230527381 + MIR SINE MIR 36 260 -2 269 252 134 42 chr2 22729245 22729364 -230527219 + MIR3 SINE MIR 1 130 -78 2176 116 3 0 chr2 22729507 22729801 -230526782 - AluSg SINE Alu -15 295 1 325 333 145 0 chr2 22730121 22730238 -230526345 + L2 LINE L2 3137 3270 -2 330 321 54 45 chr2 22730284 22730508 -230526075 - MIR SINE MIR -9 253 28 31 0 0 0 chr2 22732810 22732841 -230523742 + AT_rich Low_complexity Low_complexity 1 31 0 229 319 70 57 chr2 22733060 22733217 -230523366 - L2 LINE L2 -244 3028 2870 22 0 0 0 chr2 22734945 22734967 -230521616 + AT_rich Low_complexity Low_complexity 1 22 0 278 208 69 0 chr2 22735464 22735536 -230521047 + MER103 DNA DNA 2 78 -88 1822 179 7 10 chr2 22735630 22735931 -230520652 + AluJb SINE Alu 2 301 -11 321 258 21 108 chr2 22736050 22736144 -230520439 - MIR SINE MIR -7 255 185 2232 94 3 16 chr2 22736144 22736451 -230520132 - AluSx SINE Alu -8 304 2 321 258 21 108 chr2 22736451 22736550 -230520033 - MIR SINE MIR -77 185 79 331 324 15 15 chr2 22736744 22736880 -230519703 + HAL1 LINE L1 1642 1777 -730 221 321 12 0 chr2 22739405 22739486 -230517097 + GA-rich Low_complexity Low_complexity 2 83 0 22 0 0 0 chr2 22739667 22739689 -230516894 + AT_rich Low_complexity Low_complexity 1 22 0 533 259 71 57 chr2 22740939 22741381 -230515202 + L1ME LINE L1 5316 5776 -345 251 350 82 0 chr2 22741829 22741926 -230514657 + MIR3 SINE MIR 95 199 -9 406 279 23 0 chr2 22742264 22742393 -230514190 + MER94 DNA DNA 3 134 0 381 211 179 0 chr2 22742758 22742853 -230513730 + MER81 DNA DNA 3 114 0 1890 164 26 26 chr2 22742962 22743352 -230513231 + MLT1B LTR MaLR 1 390 0 286 292 0 0 chr2 22744464 22744529 -230512054 + L2 LINE L2 3208 3272 0 641 332 122 11 chr2 22745515 22745885 -230510698 - MLT1J LTR MaLR -1 510 100 283 285 73 3 chr2 22746240 22746358 -230510225 + MIR SINE MIR 30 154 -63 326 275 101 18 chr2 22746373 22746482 -230510101 - L2 LINE L2 0 3272 3155 1889 168 10 23 chr2 22746890 22747193 -230509390 + AluJb SINE Alu 1 299 -13 4151 152 11 45 chr2 22747193 22748042 -230508541 + L1MA4 LINE L1 5481 6300 0 22 0 0 0 chr2 22749575 22749597 -230506986 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 22751666 22751694 -230504889 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr2 22751817 22751848 -230504735 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr2 22752169 22752193 -230504390 + AT_rich Low_complexity Low_complexity 1 24 0 254 150 0 17 chr2 22752488 22752548 -230504035 + (TG)n Simple_repeat Simple_repeat 2 60 0 846 293 45 45 chr2 22753470 22753828 -230502755 - L2 LINE L2 0 3313 2956 2068 129 7 26 chr2 22753902 22754205 -230502378 + AluSg SINE Alu 1 297 -13 331 274 24 0 chr2 22754772 22754856 -230501727 + L2 LINE L2 1225 1310 -2004 468 271 121 10 chr2 22754871 22755078 -230501505 - MLT1G LTR MaLR -358 232 3 2805 200 46 28 chr2 22755140 22755180 -230501403 + MER67B LTR ERV1 1 39 -622 2316 126 21 19 chr2 22755180 22755552 -230501031 + THE1C LTR MaLR 3 375 0 7389 157 57 38 chr2 22755552 22757097 -230499486 + THE1C-int LTR MaLR 5 1580 0 2257 157 5 11 chr2 22757097 22757474 -230499109 + THE1C LTR MaLR 1 375 0 2805 200 46 28 chr2 22757474 22758080 -230498503 + MER67B LTR ERV1 38 661 0 259 264 60 104 chr2 22758084 22758285 -230498298 - MLT1G-int LTR MaLR -69 1302 1111 1393 214 36 36 chr2 22759654 22760019 -230496564 - MLT1A1 LTR MaLR 0 365 1 951 292 71 21 chr2 22760021 22760498 -230496085 - MLT1G LTR MaLR -93 497 1 207 146 0 0 chr2 22760561 22760602 -230495981 + (CA)n Simple_repeat Simple_repeat 1 41 0 782 246 39 58 chr2 22760884 22761294 -230495289 - L1ME1 LINE L1 -5 6161 5760 2251 243 58 5 chr2 22761295 22761859 -230494724 + MLT1A1-int LTR MaLR 1137 1730 -5 1628 210 40 11 chr2 22761870 22762222 -230494361 + MLT1A1 LTR MaLR 1 362 -3 1009 213 12 12 chr2 22762229 22762473 -230494110 - L1ME1 LINE L1 -409 5757 5514 2067 93 3 93 chr2 22762893 22763225 -230493358 - AluSp SINE Alu -11 302 1 363 330 98 17 chr2 22763304 22763540 -230493043 - L2 LINE L2 -79 3234 2980 286 318 81 55 chr2 22763658 22763894 -230492689 - L2 LINE L2 -438 2876 2635 22096 156 23 9 chr2 22763903 22764111 -230492472 + L1PA10 LINE L1 1028 1232 -5251 216 0 0 0 chr2 22764111 22764135 -230492448 + (CAA)n Simple_repeat Simple_repeat 1 24 0 22096 156 23 9 chr2 22764135 22769265 -230487318 + L1PA10 LINE L1 1232 6483 0 479 349 24 31 chr2 22769382 22769637 -230486946 - L2 LINE L2 -757 2557 2305 1492 106 8 16 chr2 22769646 22769901 -230486682 + L1MA3 LINE L1 6017 6269 -36 23 0 0 0 chr2 22769901 22769924 -230486659 + AT_rich Low_complexity Low_complexity 1 23 0 621 279 129 59 chr2 22769958 22770600 -230485983 - L2 LINE L2 -1056 2258 1572 207 69 0 0 chr2 22770716 22770745 -230485838 + (CAAAA)n Simple_repeat Simple_repeat 5 33 0 2156 93 17 3 chr2 22770985 22771276 -230485307 + AluSg SINE Alu 8 302 -8 27 0 0 0 chr2 22771309 22771336 -230485247 + AT_rich Low_complexity Low_complexity 1 27 0 317 282 0 0 chr2 22772827 22772912 -230483671 + (ATG)n Simple_repeat Simple_repeat 1 85 0 207 69 0 0 chr2 22773528 22773557 -230483026 + (TTTC)n Simple_repeat Simple_repeat 4 32 0 1210 235 77 37 chr2 22776614 22776993 -230479590 - MSTD LTR MaLR 0 396 3 183 353 24 12 chr2 22778248 22778333 -230478250 + L3 LINE CR1 1371 1456 -121 204 316 61 20 chr2 22778433 22778531 -230478052 - MIR SINE MIR -155 107 6 196 353 102 21 chr2 22779963 22780095 -230476488 - MIR SINE MIR -68 140 6 184 255 20 0 chr2 22780311 22780362 -230476221 - L2 LINE L2 -83 3189 3138 216 287 42 91 chr2 22782003 22782091 -230474492 + L2 LINE L2 2600 2680 -634 1180 180 37 26 chr2 22782091 22782363 -230474220 - ORSL DNA AcHobo 0 275 1 216 287 42 91 chr2 22782363 22782417 -230474166 + L2 LINE L2 2680 2735 -579 250 377 35 10 chr2 22783149 22783348 -230473235 + MIR3 SINE MIR 2 205 -3 337 344 54 32 chr2 22784325 22784511 -230472072 - MIR SINE MIR -10 252 63 1923 147 0 38 chr2 22786523 22786837 -230469746 + AluSx SINE Alu 1 302 -10 21 0 0 0 chr2 22787770 22787791 -230468792 + AT_rich Low_complexity Low_complexity 1 21 0 182 61 0 30 chr2 22789155 22789188 -230467395 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 554 106 0 0 chr2 22789189 22789274 -230467309 - L1PA13 LINE L1 -30 6133 6049 644 268 77 30 chr2 22789792 22790228 -230466355 - LTR33 LTR ERVL -5 516 25 308 338 26 19 chr2 22790864 22791018 -230465565 - MIR SINE MIR -5 257 103 277 217 43 6 chr2 22791146 22791307 -230465276 + (CATATA)n Simple_repeat Simple_repeat 2 168 0 690 295 87 62 chr2 22792322 22792804 -230463779 - MLT1G1 LTR MaLR 0 595 102 1836 96 96 0 chr2 22795867 22796138 -230460445 + AluSg SINE Alu 1 297 -13 248 311 39 29 chr2 22796246 22796349 -230460234 + MIR3 SINE MIR 60 163 -45 1137 273 72 45 chr2 22796456 22797163 -230459420 - L2 LINE L2 -96 3217 2490 322 275 100 0 chr2 22798755 22798875 -230457708 - L2 LINE L2 -1362 1952 1821 243 0 0 0 chr2 22799172 22799199 -230457384 + (TG)n Simple_repeat Simple_repeat 1 27 0 606 217 37 25 chr2 22799321 22799482 -230457101 - MIR SINE MIR -56 206 44 183 100 0 0 chr2 22799835 22799865 -230456718 + (GGAAA)n Simple_repeat Simple_repeat 3 32 0 195 290 41 69 chr2 22800330 22800475 -230456108 - MIR SINE MIR -40 222 82 191 279 87 39 chr2 22800697 22800801 -230455782 - L3 LINE CR1 -90 1487 1379 185 314 0 0 chr2 22801244 22801295 -230455288 - L2 LINE L2 -16 3256 3206 213 250 18 18 chr2 22801751 22801807 -230454776 + L2 LINE L2 3209 3264 -49 216 97 0 0 chr2 22801817 22801848 -230454735 + (TGAG)n Simple_repeat Simple_repeat 1 31 0 381 206 7 78 chr2 22802684 22802825 -230453758 + L1ME3 LINE L1 5832 5962 -200 203 342 237 0 chr2 22803073 22803187 -230453396 - MIR3 SINE MIR -49 159 19 283 291 120 0 chr2 22803871 22803988 -230452595 + MIR SINE MIR 96 226 -36 309 302 75 28 chr2 22804211 22804317 -230452266 - L3 LINE CR1 -60 1517 1407 22 56 0 0 chr2 22804908 22804944 -230451639 + AT_rich Low_complexity Low_complexity 1 36 0 2288 105 0 3 chr2 22805136 22805442 -230451141 + AluSg SINE Alu 1 305 -5 349 296 116 37 chr2 22806040 22806229 -230450354 - MIR SINE MIR -1 261 58 2152 118 3 7 chr2 22806236 22806540 -230450043 + AluSx SINE Alu 3 305 -7 2219 110 3 0 chr2 22806876 22807175 -230449408 + AluSx SINE Alu 1 300 -12 341 286 130 7 chr2 22807279 22807385 -230449198 + MIR SINE MIR 81 213 -49 225 0 0 0 chr2 22807385 22807410 -230449173 + (TA)n Simple_repeat Simple_repeat 1 25 0 341 286 130 7 chr2 22807410 22807457 -230449126 + MIR SINE MIR 213 253 -9 455 250 22 15 chr2 22808384 22808520 -230448063 - Charlie2a DNA MER1_type 0 2862 2726 551 189 31 66 chr2 22808539 22808735 -230447848 - Charlie2a DNA MER1_type -1202 1660 1472 733 288 66 28 chr2 22808901 22809189 -230447394 - Charlie2a DNA MER1_type -2477 305 7 258 239 34 111 chr2 22809272 22809389 -230447194 - MIR3 SINE MIR -7 201 94 2460 53 3 3 chr2 22809733 22810035 -230446548 - AluY SINE Alu -9 302 1 25 0 0 0 chr2 22814238 22814263 -230442320 + AT_rich Low_complexity Low_complexity 1 25 0 306 0 0 0 chr2 22814269 22814303 -230442280 + (CA)n Simple_repeat Simple_repeat 2 35 0 344 298 80 20 chr2 22814478 22814629 -230441954 + MER5A DNA MER1_type 2 161 -28 366 241 148 92 chr2 22814948 22815470 -230441113 - MER34C LTR ERV1 0 585 35 202 326 124 8 chr2 22816397 22816526 -230440057 - L2 LINE L2 -2 3270 3127 1020 196 99 48 chr2 22816639 22817013 -230439570 + MLT1C LTR MaLR 6 390 0 1143 49 0 0 chr2 22817462 22817604 -230438979 - L1PA8 LINE L1 -419 5753 5612 3243 71 7 0 chr2 22817614 22818036 -230438547 + L1PA8 LINE L1 5746 6170 -2 780 284 90 29 chr2 22818802 22819703 -230436880 + L1MEc LINE L1 705 1461 -4754 * 929 274 119 35 chr2 22819686 22820040 -230436543 + L1MEc LINE L1 2157 2480 -3735 1690 204 132 34 chr2 22820040 22820152 -230436431 + MLT2B1 LTR ERVL 4 104 -416 2560 43 0 3 chr2 22820152 22820456 -230436127 + AluY SINE Alu 1 303 -8 1690 204 132 34 chr2 22820456 22820759 -230435824 + MLT2B1 LTR ERVL 104 376 -144 189 107 0 0 chr2 22820759 22820787 -230435796 + (CATATA)n Simple_repeat Simple_repeat 3 30 0 1690 204 132 34 chr2 22820787 22820800 -230435783 + MLT2B1 LTR ERVL 376 386 -134 219 36 0 0 chr2 22820800 22820828 -230435755 + (TG)n Simple_repeat Simple_repeat 2 29 0 1690 204 132 34 chr2 22820828 22820868 -230435715 + MLT2B1 LTR ERVL 386 520 0 929 274 119 35 chr2 22820868 22821220 -230435363 + L1MEc LINE L1 2480 2885 -3330 1216 198 118 19 chr2 22821220 22821533 -230435050 - MER2 DNA MER2_type 0 344 1 929 274 119 35 chr2 22821533 22821547 -230435036 + L1MEc LINE L1 2885 2896 -3319 956 254 19 29 chr2 22821573 22821865 -230434718 + L1MEc LINE L1 3402 3691 -2524 2269 137 64 17 chr2 22821865 22822274 -230434309 + MSTA LTR MaLR 1 428 0 956 254 19 29 chr2 22822274 22822355 -230434228 + L1MEc LINE L1 3691 3771 -2444 256 210 20 40 chr2 22822388 22822488 -230434095 + L1MC5 LINE L1 7612 7709 -252 238 237 53 0 chr2 22822543 22822619 -230433964 - MER116 DNA Mariner 0 80 1 183 80 0 0 chr2 22823368 22823393 -230433190 + (CA)n Simple_repeat Simple_repeat 2 26 0 308 217 33 50 chr2 22823524 22823644 -230432939 - LTR41 LTR ERVL -6 767 650 685 237 47 51 chr2 22823981 22824238 -230432345 - LTR41 LTR ERVL -501 272 17 686 281 76 5 chr2 22824404 22824614 -230431969 + MIR SINE MIR 28 252 -10 274 310 100 0 chr2 22825578 22825678 -230430905 + L2 LINE L2 3163 3272 0 306 50 0 0 chr2 22826525 22826565 -230430018 + (TTCA)n Simple_repeat Simple_repeat 1 40 0 326 180 0 0 chr2 22826571 22826621 -230429962 - 5S rRNA rRNA -70 51 2 22 0 0 0 chr2 22826956 22826978 -230429605 + AT_rich Low_complexity Low_complexity 1 22 0 301 300 65 25 chr2 22826985 22827185 -230429398 + L1M4 LINE L1 2225 2432 -3714 248 304 72 0 chr2 22827493 22827631 -230428952 - MER104 DNA Tc2 -31 149 2 27 0 0 0 chr2 22827688 22827715 -230428868 + AT_rich Low_complexity Low_complexity 1 27 0 360 311 15 15 chr2 22827851 22827986 -230428597 + MLT1I LTR MaLR 80 214 -195 6188 145 26 10 chr2 22828118 22829109 -230427474 + THE1C-int LTR MaLR 574 1580 0 2413 113 21 37 chr2 22829109 22829447 -230427136 + THE1C LTR MaLR 1 334 -41 2255 115 3 0 chr2 22829447 22829752 -230426831 - AluSx SINE Alu -1 311 6 2413 113 21 37 chr2 22829752 22829794 -230426789 + THE1C LTR MaLR 334 375 0 10580 136 31 89 chr2 22829794 22830647 -230425936 + Tigger1 DNA MER2_type 282 1182 -1236 1944 119 3 77 chr2 22830647 22830983 -230425600 + AluSp SINE Alu 1 311 -2 10580 136 31 89 chr2 22830983 22831597 -230424986 + Tigger1 DNA MER2_type 1182 1764 -654 870 187 6 29 chr2 22831597 22831768 -230424815 + FRAM SINE Alu 1 163 -13 10580 136 31 89 chr2 22831768 22832318 -230424265 + Tigger1 DNA MER2_type 1764 2344 -74 1575 230 110 17 chr2 22832348 22832939 -230423644 + L1MC3 LINE L1 4744 5389 -757 258 250 0 0 chr2 22832936 22832996 -230423587 - L1 LINE L1 -1179 4967 4908 * 3636 197 54 5 chr2 22833023 22833746 -230422837 - L1 LINE L1 -1225 4921 4150 288 0 0 0 chr2 22833746 22833778 -230422805 + (TC)n Simple_repeat Simple_repeat 2 33 0 3636 197 54 5 chr2 22833778 22833883 -230422700 - L1 LINE L1 -1996 4150 4052 * 3702 173 41 35 chr2 22833881 22835017 -230421566 + L1MA9 LINE L1 4941 6081 -231 403 194 58 10 chr2 22835019 22835122 -230421461 + L1MA9 LINE L1 6180 6287 -25 45 19 0 0 chr2 22835125 22835177 -230421406 + AT_rich Low_complexity Low_complexity 1 52 0 7281 201 41 25 chr2 22835204 22835542 -230421041 + L1MC3 LINE L1 5386 5717 -2068 2590 39 3 0 chr2 22835542 22835883 -230420700 + AluY SINE Alu 1 342 0 7281 201 41 25 chr2 22835883 22837315 -230419268 + L1MC3 LINE L1 5717 7186 -599 630 302 108 0 chr2 22837317 22837585 -230418998 - MER110 LTR ERV1 -7 484 188 521 315 80 28 chr2 22837874 22838236 -230418347 + L1ME LINE L1 5335 5715 -455 21 0 0 0 chr2 22838321 22838342 -230418241 + AT_rich Low_complexity Low_complexity 1 21 0 2235 129 44 46 chr2 22838342 22838777 -230417806 + Tigger2a DNA MER2_type 1 434 0 2456 162 9 12 chr2 22839026 22839453 -230417130 + MSTB LTR MaLR 1 426 0 299 273 36 9 chr2 22839618 22839728 -230416855 - L1M4 LINE L1 -1201 4945 4833 1355 264 47 28 chr2 22839778 22840271 -230416312 - L1M4 LINE L1 -1319 4827 4326 647 276 0 54 chr2 22840271 22840456 -230416127 + MER8 DNA MER2_type 1 175 -64 408 148 0 111 chr2 22840491 22840572 -230416011 - Tigger2a DNA MER2_type -361 73 2 2534 232 26 19 chr2 22840573 22841297 -230415286 - L1M4 LINE L1 -1823 4323 3595 22 0 0 0 chr2 22841418 22841440 -230415143 + AT_rich Low_complexity Low_complexity 1 22 0 2473 67 0 13 chr2 22842029 22842344 -230414239 - AluY SINE Alu 0 311 1 472 328 123 0 chr2 22844805 22845009 -230411574 - MIR SINE MIR -10 252 24 501 348 26 31 chr2 22845339 22845566 -230411017 - MIR SINE MIR -14 248 23 429 293 75 11 chr2 22845968 22846156 -230410427 - HAL1 LINE L1 -1933 574 375 230 143 41 0 chr2 22846576 22846625 -230409958 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 192 356 43 26 chr2 22847278 22847372 -230409211 + MIR SINE MIR 30 128 -80 4406 101 16 0 chr2 22847372 22847997 -230408586 + MER41B LTR ERV1 1 635 0 192 356 43 26 chr2 22847997 22848017 -230408566 + MIR SINE MIR 128 146 -62 22 0 0 0 chr2 22848568 22848590 -230407993 + AT_rich Low_complexity Low_complexity 1 22 0 238 48 0 48 chr2 22848603 22848645 -230407938 + (TA)n Simple_repeat Simple_repeat 1 40 0 475 284 161 14 chr2 22848913 22849131 -230407452 + MIR SINE MIR 13 262 0 505 278 97 34 chr2 22849459 22849635 -230406948 + MIR SINE MIR 65 251 -11 282 316 33 40 chr2 22849665 22849817 -230406766 + L2 LINE L2 3146 3296 -17 1309 276 72 35 chr2 22850166 22851061 -230405522 + L1MEc LINE L1 2159 3037 -3178 383 332 91 18 chr2 22851203 22851437 -230405146 + L1MEc LINE L1 3041 3292 -2923 794 222 4 50 chr2 22851450 22851695 -230404888 + L1ME2 LINE L1 4467 4700 -1446 422 232 90 13 chr2 22851706 22851861 -230404722 + L1ME2 LINE L1 5281 5447 -715 366 236 79 0 chr2 22851885 22852012 -230404571 + L1ME2 LINE L1 5751 5887 -277 398 278 97 42 chr2 22852015 22852231 -230404352 + L1ME2 LINE L1 5936 6163 -1 298 328 56 31 chr2 22852224 22852245 -230404338 + L1MEc LINE L1 3398 3417 -2798 * 3293 130 43 26 chr2 22852245 22852828 -230403755 + LTR49 LTR ERV1 3 595 0 298 328 56 31 chr2 22852828 22853163 -230403420 + L1MEc LINE L1 3417 3763 -2452 814 268 98 40 chr2 22853339 22853958 -230402625 - L1M4 LINE L1 -1809 4337 3683 315 252 50 0 chr2 22854570 22854689 -230401894 - L1ME3A LINE L1 -4 6166 6042 2127 122 7 0 chr2 22854690 22854984 -230401599 + AluSx SINE Alu 1 296 -16 344 284 0 11 chr2 22854987 22855082 -230401501 - L1MC4 LINE L1 -1339 6703 6610 355 300 23 0 chr2 22855083 22855213 -230401370 - L1ME3A LINE L1 -123 6047 5915 618 266 86 5 chr2 22855215 22855437 -230401146 - L1ME3A LINE L1 -285 5885 5646 393 86 43 0 chr2 22855437 22855507 -230401076 - MER31-int LTR ERV1 -1985 2951 2879 2312 61 16 13 chr2 22855531 22855841 -230400742 - AluY SINE Alu 0 311 1 1096 171 6 0 chr2 22855844 22856020 -230400563 - AluJb SINE Alu -16 296 120 1231 94 42 5 chr2 22856040 22856232 -230400351 - L1PA3 LINE L1 0 6155 5957 879 263 67 24 chr2 22856232 22856520 -230400063 - L1ME3A LINE L1 -518 5652 5343 297 0 0 0 chr2 22856520 22856553 -230400030 + (TG)n Simple_repeat Simple_repeat 2 34 0 879 263 67 24 chr2 22856553 22856640 -230399943 - L1ME3A LINE L1 -827 5343 5261 308 230 50 80 chr2 22857977 22858077 -230398506 + MER91C DNA MER1_type 12 108 -32 249 33 0 0 chr2 22858833 22858863 -230397720 + (TG)n Simple_repeat Simple_repeat 1 30 0 256 219 0 78 chr2 22859041 22859105 -230397478 + MER115 DNA AcHobo 1 59 -634 2095 101 3 21 chr2 22859246 22859566 -230397017 - AluSx SINE Alu 0 315 1 1327 179 43 33 chr2 22860000 22860301 -230396282 + MLT2C1 LTR ERVL 93 396 -1 357 276 30 30 chr2 22860347 22860481 -230396102 - MLT1K LTR MaLR -338 250 117 270 321 46 55 chr2 22862044 22862153 -230394430 - MIR SINE MIR -58 150 43 326 339 130 28 chr2 22862599 22862776 -230393807 + MER91A DNA MER1_type 2 196 0 1056 208 55 104 chr2 22863485 22863819 -230392764 + MLT1A1 LTR MaLR 1 350 -15 450 0 0 0 chr2 22863819 22863869 -230392714 + (TA)n Simple_repeat Simple_repeat 1 50 0 279 0 0 0 chr2 22863868 22863899 -230392684 + (CA)n Simple_repeat Simple_repeat 2 32 0 * 1056 208 55 104 chr2 22863869 22863948 -230392635 + MLT1A1 LTR MaLR 350 365 0 644 271 124 19 chr2 22864525 22864735 -230391848 - MIR SINE MIR -28 234 3 643 317 0 0 chr2 22865421 22865585 -230390998 - MIR SINE MIR -98 164 1 1129 171 9 46 chr2 22866329 22866545 -230390038 + AluJb SINE Alu 86 293 -19 226 147 0 0 chr2 22867323 22867357 -230389226 + (TAGA)n Simple_repeat Simple_repeat 4 37 0 813 190 0 0 chr2 22867357 22867536 -230389047 + (CAGA)n Simple_repeat Simple_repeat 2 180 0 204 345 84 49 chr2 22867628 22867770 -230388813 - L2 LINE L2 -5 3267 3121 245 274 48 36 chr2 22868138 22868222 -230388361 + MER96 DNA MER1_type? 91 175 0 2256 171 70 42 chr2 22868554 22869082 -230387501 - MER74A LTR ERVL -15 543 1 252 0 0 0 chr2 22870068 22870096 -230386487 + (A)n Simple_repeat Simple_repeat 1 28 0 1688 238 40 12 chr2 22870098 22870519 -230386064 + MLT1C LTR MaLR 35 467 0 1671 194 156 34 chr2 22871337 22871831 -230384752 + L1ME2 LINE L1 5611 6164 0 2165 99 3 0 chr2 22871842 22872213 -230384370 + AluSp SINE Alu 2 373 0 778 255 80 34 chr2 22873067 22873306 -230383277 + MIR SINE MIR 13 262 0 8585 196 33 134 chr2 22876750 22879117 -230377466 + L1M2 LINE L1 9 2056 -4793 1718 10 0 0 chr2 22879117 22879311 -230377272 - L1PA3 LINE L1 -5 6150 5957 8585 196 33 134 chr2 22879311 22879720 -230376863 + L1M2 LINE L1 2056 2505 -4344 2442 42 0 7 chr2 22879708 22880015 -230376568 + L1P LINE L1 2768 3072 -3074 * 563 180 0 18 chr2 22880004 22880115 -230376468 + L1M2 LINE L1 2494 2602 -4247 * 2200 155 5 8 chr2 22880118 22880492 -230376091 - THE1C LTR MaLR 0 375 3 9532 123 35 40 chr2 22880494 22882082 -230374501 - THE1C-int LTR MaLR 0 1580 1 2292 128 11 14 chr2 22882084 22882443 -230374140 - THE1C LTR MaLR -2 373 16 2033 209 33 31 chr2 22882445 22883206 -230373377 + L1M2 LINE L1 2601 3362 -3486 12129 237 22 9 chr2 22883226 22888236 -230368347 - L1PA16 LINE L1 -40 6183 899 4797 141 19 20 chr2 22888237 22889089 -230367494 + L1MA4A LINE L1 5443 6293 -10 28 29 0 0 chr2 22889542 22889577 -230367006 + AT_rich Low_complexity Low_complexity 1 35 0 1439 214 0 0 chr2 22889590 22889871 -230366712 - AluJb SINE Alu -31 281 1 3641 241 49 39 chr2 22889954 22891121 -230365462 + L1MCb LINE L1 1 1178 -4867 411 302 62 36 chr2 22891112 22891337 -230365246 + HAL1 LINE L1 1373 1603 -904 * 450 272 77 57 chr2 22891424 22891727 -230364856 + L1MCb LINE L1 3150 3445 -3119 1645 150 98 7 chr2 22891727 22892013 -230364570 + AluSx SINE Alu 1 312 0 450 272 77 57 chr2 22892013 22892463 -230364120 + L1MCb LINE L1 3445 3918 -2646 719 305 89 38 chr2 22892488 22892937 -230363646 - L2 LINE L2 -18 3295 2824 372 312 77 16 chr2 22892981 22893292 -230363291 + L1MCb LINE L1 3997 4326 -2238 750 366 65 11 chr2 22893413 22893782 -230362801 + LTR16A LTR ERVL 55 443 -7 846 310 113 33 chr2 22893805 22894075 -230362508 + ERVL LTR ERVL 4479 4726 -1038 2436 125 6 0 chr2 22894075 22894428 -230362155 - THE1A LTR MaLR 0 355 1 11037 102 5 29 chr2 22894428 22896047 -230360536 - THE1A-int LTR MaLR 0 1580 1 2486 105 8 0 chr2 22896047 22896399 -230360184 - THE1A LTR MaLR 0 355 1 846 310 113 33 chr2 22896399 22896675 -230359908 + ERVL LTR ERVL 4725 5071 -693 352 331 102 39 chr2 22896687 22896992 -230359591 + MLT1I LTR MaLR 1 324 -85 298 162 27 0 chr2 22896999 22897073 -230359510 + (TA)n Simple_repeat Simple_repeat 2 77 0 6540 183 31 41 chr2 22897369 22899754 -230356829 + L1MA7 LINE L1 4355 6706 -3 5601 148 18 11 chr2 22900189 22901056 -230355527 - L1PA16 LINE L1 -3 6163 5281 198 103 0 0 chr2 22901056 22901085 -230355498 + (CTTG)n Simple_repeat Simple_repeat 3 31 0 5601 148 18 11 chr2 22901085 22901452 -230355131 - L1PA16 LINE L1 -885 5281 4918 638 202 154 0 chr2 22901698 22901805 -230354778 - L1MA9 LINE L1 -39 6273 6184 273 57 0 0 chr2 22901805 22901840 -230354743 + (TG)n Simple_repeat Simple_repeat 2 36 0 638 202 154 0 chr2 22901840 22901920 -230354663 - L1MA9 LINE L1 -128 6184 6057 2843 13 0 0 chr2 22902893 22903203 -230353380 + AluYb8 SINE Alu 1 310 -8 25 0 0 0 chr2 22903869 22903894 -230352689 + AT_rich Low_complexity Low_complexity 1 25 0 28 61 0 0 chr2 22904003 22904052 -230352531 + AT_rich Low_complexity Low_complexity 1 49 0 304 271 36 6 chr2 22904052 22904218 -230352365 + (TA)n Simple_repeat Simple_repeat 2 172 0 683 274 152 25 chr2 22904443 22904804 -230351779 - MLT1J LTR MaLR -35 476 70 3989 77 0 0 chr2 22904816 22905350 -230351233 - L1P LINE L1 -3087 3059 2526 10659 74 4 12 chr2 22905350 22908131 -230348452 + L1PA7 LINE L1 3396 6154 0 4129 167 12 65 chr2 22910096 22911162 -230345421 - L1MB1 LINE L1 -1 6167 5146 1161 236 38 3 chr2 22911163 22911477 -230345106 + L1MB1 LINE L1 4797 5121 -1025 853 368 56 23 chr2 22911550 22912282 -230344301 + L2 LINE L2 1711 2466 -848 309 248 96 50 chr2 22912282 22912602 -230343981 - MER97b DNA MER1_type? 0 1053 768 22 56 0 0 chr2 22912728 22912764 -230343819 + AT_rich Low_complexity Low_complexity 1 36 0 1182 236 36 25 chr2 22912929 22913289 -230343294 - MER97b DNA MER1_type? -448 605 242 196 118 20 20 chr2 22913327 22913378 -230343205 + (TA)n Simple_repeat Simple_repeat 1 51 0 358 35 0 35 chr2 22913428 22913486 -230343097 + (TA)n Simple_repeat Simple_repeat 1 56 0 1901 105 61 107 chr2 22913493 22913658 -230342925 - THE1C LTR MaLR 0 375 204 234 0 0 0 chr2 22913658 22913684 -230342899 + (GA)n Simple_repeat Simple_repeat 1 26 0 1901 105 61 107 chr2 22913684 22913910 -230342673 - THE1C LTR MaLR -171 204 2 218 87 43 22 chr2 22913932 22913978 -230342605 + (TA)n Simple_repeat Simple_repeat 2 48 0 412 193 12 0 chr2 22914006 22914089 -230342494 - MER97a DNA MER1_type? -658 236 153 308 250 23 0 chr2 22914089 22914177 -230342406 + L1MD2 LINE L1 6048 6137 -222 266 246 0 0 chr2 22914181 22914246 -230342337 + (TA)n Simple_repeat Simple_repeat 2 66 0 2124 117 0 0 chr2 22914297 22914630 -230341953 - AluSg SINE Alu 0 333 1 422 225 70 8 chr2 22914650 22914779 -230341804 - MER97a DNA MER1_type? -749 145 9 423 346 61 24 chr2 22914866 22915195 -230341388 + L2 LINE L2 2543 2883 -431 1158 262 47 13 chr2 22915622 22916045 -230340538 - MERVL LTR ERVL -3264 2221 1742 329 328 15 51 chr2 22916059 22916254 -230340329 - MERVL LTR ERVL -3422 1574 1387 420 379 61 0 chr2 22916326 22916606 -230339977 - MERVL LTR ERVL -3711 1285 989 903 224 22 0 chr2 22916607 22916790 -230339793 - MER5A DNA MER1_type -2 187 1 414 353 34 11 chr2 22916806 22917072 -230339511 - MERVL LTR ERVL -4016 980 709 294 350 150 10 chr2 22917363 22917657 -230338926 - L2 LINE L2 -805 2509 2175 954 124 0 0 chr2 22917658 22917811 -230338772 + (TAGA)n Simple_repeat Simple_repeat 3 155 0 21 89 0 0 chr2 22918029 22918085 -230338498 + AT_rich Low_complexity Low_complexity 1 56 0 21 71 0 0 chr2 22920625 22920667 -230335916 + AT_rich Low_complexity Low_complexity 1 42 0 296 264 23 23 chr2 22920812 22920899 -230335684 + MLT2E LTR ERVL 34 120 -508 2195 84 54 3 chr2 22920909 22921205 -230335378 + AluSq SINE Alu 1 311 -2 287 350 20 0 chr2 22921205 22921305 -230335278 + MER81 DNA DNA 3 104 -10 825 287 59 72 chr2 22921306 22921835 -230334748 + MLT2E LTR ERVL 107 628 0 201 296 19 0 chr2 22922171 22922225 -230334358 + L2 LINE L2 3198 3252 -20 183 173 96 58 chr2 22923318 22923370 -230333213 - MIR3 SINE MIR -38 170 117 374 333 8 15 chr2 22924107 22924239 -230332344 + MIR3 SINE MIR 38 168 -40 393 305 136 86 chr2 22924330 22924772 -230331811 - L2 LINE L2 0 3272 2809 2124 291 61 9 chr2 22925464 22926149 -230330434 - L3 LINE CR1 -457 1120 400 374 296 43 17 chr2 22926277 22926392 -230330191 + L2 LINE L2 3196 3313 0 1158 231 0 4 chr2 22926498 22926723 -230329860 + MER58A DNA MER1_type 1 224 0 196 363 134 25 chr2 22926948 22927105 -230329478 - MIR SINE MIR -5 257 84 352 409 50 0 chr2 22931091 22931250 -230325333 + L2 LINE L2 3106 3272 0 564 304 27 11 chr2 22931582 22931766 -230324817 - MIR SINE MIR -13 249 63 1513 215 0 13 chr2 22931769 22932076 -230324507 - AluJo SINE Alu -9 303 1 229 324 14 0 chr2 22932470 22932541 -230324042 - L2 LINE L2 -1 3271 3200 1800 221 54 50 chr2 22935966 22936077 -230320506 - MER68 LTR ERV1 0 562 453 2303 125 3 55 chr2 22936077 22936461 -230320122 - THE1B LTR MaLR 0 364 1 1800 221 54 50 chr2 22936461 22936909 -230319674 - MER68 LTR ERV1 -109 453 1 322 302 101 0 chr2 22938738 22938877 -230317706 + MIR SINE MIR 18 170 -92 283 258 15 0 chr2 22939614 22939680 -230316903 - L3 LINE CR1 -2 1575 1509 1515 173 3 13 chr2 22939821 22940127 -230316456 - L1PB4 LINE L1 -268 5888 5586 715 264 0 0 chr2 22940126 22940300 -230316283 + L1PA16 LINE L1 5942 6115 -51 * 461 357 58 49 chr2 22940419 22940846 -230315737 + L2 LINE L2 2596 3032 -281 879 64 80 0 chr2 22940846 22940971 -230315612 - MER85 DNA T2_type -2 137 3 461 357 58 49 chr2 22940971 22941254 -230315329 + L2 LINE L2 3032 3311 -2 217 214 0 0 chr2 22941705 22941747 -230314836 + (TG)n Simple_repeat Simple_repeat 1 42 0 2164 105 66 0 chr2 22941755 22942087 -230314496 - THE1B LTR MaLR 0 364 11 181 333 0 0 chr2 22942110 22942158 -230314425 - L3 LINE CR1 -595 982 935 864 268 198 22 chr2 22942225 22942684 -230313899 + MLT1F LTR MaLR 1 540 -2 21 0 0 0 chr2 22942808 22942829 -230313754 + AT_rich Low_complexity Low_complexity 1 21 0 258 343 117 54 chr2 22942856 22943278 -230313305 - L3 LINE CR1 -872 705 240 6962 62 2 1 chr2 22943278 22944351 -230312232 + L1PA5 LINE L1 5078 6151 -3 258 343 117 54 chr2 22944351 22944465 -230312118 - L3 LINE CR1 -1337 240 135 286 280 51 89 chr2 22945363 22945713 -230310870 + L1ME LINE L1 5311 5647 -474 2126 152 0 0 chr2 22945718 22946021 -230310562 + AluSq SINE Alu 1 303 -10 4186 86 50 3 chr2 22946873 22947454 -230309129 + LTR14B LTR ERVK 1 608 0 22 0 0 0 chr2 22947718 22947740 -230308843 + AT_rich Low_complexity Low_complexity 1 22 0 347 281 81 30 chr2 22948006 22948349 -230308234 - L1ME LINE L1 -542 5628 5258 33 0 0 0 chr2 22948993 22949026 -230307557 + AT_rich Low_complexity Low_complexity 1 33 0 209 385 10 10 chr2 22950105 22950209 -230306374 - L2 LINE L2 -244 3028 2925 31 26 0 0 chr2 22951533 22951571 -230305012 + AT_rich Low_complexity Low_complexity 1 38 0 418 303 67 30 chr2 22952076 22952241 -230304342 - MIR SINE MIR -28 234 64 232 227 0 0 chr2 22953114 22953158 -230303425 + L2 LINE L2 2703 2746 -568 1011 177 4 62 chr2 22953289 22953354 -230303229 - L1MD1 LINE L1 -5 6237 6170 2250 83 7 0 chr2 22953354 22953643 -230302940 + AluY SINE Alu 1 291 -20 1011 177 4 62 chr2 22953643 22953820 -230302763 - L1MD1 LINE L1 -72 6170 6009 1833 165 38 28 chr2 22953820 22954213 -230302370 - L1MD1 LINE L1 -564 5795 5399 1700 120 12 56 chr2 22954214 22954555 -230302028 + THE1C LTR MaLR 1 326 -49 337 339 130 28 chr2 22955073 22955250 -230301333 + MER91A DNA MER1_type 2 196 0 866 220 54 109 chr2 22955959 22956293 -230300290 + MLT1A1 LTR MaLR 1 352 -13 450 0 0 0 chr2 22956293 22956343 -230300240 + (TA)n Simple_repeat Simple_repeat 1 50 0 261 0 0 0 chr2 22956342 22956371 -230300212 + (CA)n Simple_repeat Simple_repeat 2 30 0 * 866 220 54 109 chr2 22956343 22956422 -230300161 + MLT1A1 LTR MaLR 352 365 0 1564 182 5 39 chr2 22957082 22957540 -230299043 - L1M LINE L1 -751 5395 4965 182 174 22 0 chr2 22957562 22957608 -230298975 + CT-rich Low_complexity Low_complexity 3 49 0 247 163 0 0 chr2 22957625 22957668 -230298915 - L1M4 LINE L1 -1204 4942 4900 2042 149 0 0 chr2 22957680 22957976 -230298607 - AluSx SINE Alu -16 296 1 390 291 52 58 chr2 22959630 22959957 -230296626 - HsTC2 DNA Tc2 -1086 812 488 279 308 112 14 chr2 22960320 22960463 -230296120 + MIR SINE MIR 100 256 -6 203 303 45 22 chr2 22961153 22961242 -230295341 + L2 LINE L2 1468 1558 -1756 1483 234 112 27 chr2 22961243 22961806 -230294777 - L1MCb LINE L1 -4873 1172 562 944 301 18 6 chr2 22962006 22962332 -230294251 + MER93a LTR ERV1 73 402 0 633 284 44 68 chr2 22962347 22962756 -230293827 - L1MCb LINE L1 -5486 559 161 4657 52 3 0 chr2 22962992 22963571 -230293012 - L1PA7 LINE L1 0 6154 5574 567 215 9 9 chr2 22963582 22963689 -230292894 - MER5B DNA MER1_type -6 172 66 301 253 32 118 chr2 22963713 22963934 -230292649 + L2 LINE L2 2682 2883 -431 * 513 236 6 56 chr2 22963918 22964079 -230292504 - L2 LINE L2 0 3313 3161 189 195 0 0 chr2 22964082 22964123 -230292460 + (TA)n Simple_repeat Simple_repeat 1 41 0 3847 158 44 19 chr2 22964126 22965130 -230291453 - L1MB1 LINE L1 -81 6087 5058 1865 320 96 35 chr2 22965130 22966348 -230290235 - L2 LINE L2 -196 3117 1826 1012 309 63 50 chr2 22966352 22966886 -230289697 + L1ME LINE L1 6 532 -5538 1559 201 25 19 chr2 22966886 22967249 -230289334 - MLT1A1 LTR MaLR 0 365 1 1012 309 63 50 chr2 22967249 22967781 -230288802 + L1ME LINE L1 532 1086 -4984 566 266 121 32 chr2 22967785 22968033 -230288550 + L1ME LINE L1 1152 1421 -4840 328 147 29 0 chr2 23069388 23069456 -230187127 - L1MD2 LINE L1 -3 6356 6287 2170 130 0 9 chr2 23069458 23069774 -230186809 + AluSq SINE Alu 1 313 0 2236 111 0 7 chr2 23070078 23070375 -230186208 + AluSq SINE Alu 2 296 -17 872 167 30 15 chr2 23070403 23070601 -230185982 + L1MD3 LINE L1 7794 7994 -1 662 286 12 6 chr2 23071094 23071265 -230185318 - MER90 LTR ERV1 -442 172 1 498 223 67 80 chr2 23071666 23071718 -230184865 + MER112 DNA MER1_type 29 80 -180 321 26 0 0 chr2 23071718 23071756 -230184827 + (CA)n Simple_repeat Simple_repeat 2 39 0 498 223 67 80 chr2 23071756 23071927 -230184656 + MER112 DNA MER1_type 80 249 -11 2113 133 0 3 chr2 23072346 23072640 -230183943 + AluSx SINE Alu 1 293 -19 290 254 26 70 chr2 23073436 23073550 -230183033 - MER5A DNA MER1_type 0 189 70 2250 101 7 0 chr2 23075415 23075742 -230180841 + AluSg SINE Alu 7 335 0 579 265 99 24 chr2 23075744 23075997 -230180586 + L1ME1 LINE L1 5871 6142 -24 6682 174 35 10 chr2 23076425 23077637 -230178946 + MST-int LTR MaLR 216 1457 -194 852 251 5 5 chr2 23077643 23077850 -230178733 - AluJb SINE Alu 0 312 106 1765 129 82 0 chr2 23078819 23079099 -230177484 + AluJb SINE Alu 1 303 -9 1467 166 25 7 chr2 23079580 23079863 -230176720 + L1MA4A LINE L1 6016 6303 0 191 316 93 53 chr2 23080099 23080324 -230176259 - L3 LINE CR1 -15 1562 1329 252 238 16 16 chr2 23081293 23081356 -230175227 + CT-rich Low_complexity Low_complexity 2 64 0 342 238 91 11 chr2 23081359 23081532 -230175051 - L1MC4 LINE L1 0 8042 7725 244 309 43 0 chr2 23081628 23081722 -230174861 + MIR SINE MIR 28 125 -137 216 188 165 24 chr2 23081888 23081973 -230174610 + MIR SINE MIR 79 175 -87 215 323 31 0 chr2 23082104 23082200 -230174383 + MIR SINE MIR 23 121 -141 21 0 0 0 chr2 23082205 23082226 -230174357 + AT_rich Low_complexity Low_complexity 1 21 0 602 173 0 39 chr2 23082232 23082359 -230174224 + L1PB3 LINE L1 6033 6154 0 23 54 0 0 chr2 23082359 23082396 -230174187 + AT_rich Low_complexity Low_complexity 1 37 0 603 239 137 24 chr2 23082766 23082971 -230173612 - MIR SINE MIR 0 262 35 413 266 26 9 chr2 23083137 23083250 -230173333 - L2 LINE L2 -21 3251 3137 24 0 0 0 chr2 23084349 23084373 -230172210 + AT_rich Low_complexity Low_complexity 1 24 0 1566 153 47 4 chr2 23085493 23085748 -230170835 + AluJb SINE Alu 1 266 -46 2181 121 3 0 chr2 23085780 23086069 -230170514 + AluSx SINE Alu 1 290 -22 2368 81 3 0 chr2 23086455 23086750 -230169833 - AluY SINE Alu -15 296 1 1383 162 4 9 chr2 23086758 23086986 -230169597 - THE1C LTR MaLR -148 227 1 357 101 145 159 chr2 23087693 23087741 -230168842 - MIR SINE MIR -24 238 191 1604 123 0 13 chr2 23087741 23087969 -230168614 + AluSc SINE Alu 83 307 -2 357 101 145 159 chr2 23087969 23088058 -230168525 - MIR SINE MIR -71 191 103 232 274 68 68 chr2 23088062 23088208 -230168375 + MIR3 SINE MIR 2 147 -61 24 0 0 0 chr2 23088734 23088758 -230167825 + AT_rich Low_complexity Low_complexity 1 24 0 1774 180 23 0 chr2 23088760 23089065 -230167518 + AluJb SINE Alu 1 312 0 573 295 121 43 chr2 23089104 23089450 -230167133 + L3 LINE CR1 1119 1491 -86 733 277 46 35 chr2 23089450 23089735 -230166848 + L1ME LINE L1 5328 5615 -506 246 243 57 0 chr2 23090174 23090244 -230166339 + MIR SINE MIR 78 151 -111 25 0 0 0 chr2 23192170 23192195 -230064388 + AT_rich Low_complexity Low_complexity 1 25 0 4519 138 42 22 chr2 23192196 23192950 -230063633 - L1PA16 LINE L1 -10 6156 5388 193 342 60 43 chr2 23193120 23193354 -230063229 - L2 LINE L2 -924 2390 2153 197 83 28 0 chr2 23194031 23194067 -230062516 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 292 333 43 62 chr2 23194457 23194667 -230061916 + L2 LINE L2 2633 2838 -476 1699 176 29 67 chr2 23194693 23195069 -230061514 + MLT1A1 LTR MaLR 4 365 0 247 200 0 0 chr2 23195075 23195120 -230061463 - MER92C LTR ERV1 -19 535 491 468 311 31 31 chr2 23195148 23195373 -230061210 - MER92C LTR ERV1 -329 225 1 221 353 59 8 chr2 23195519 23195638 -230060945 + MIR SINE MIR 120 244 -18 257 359 11 0 chr2 23195812 23195904 -230060679 - L2 LINE L2 -59 3213 3121 341 136 15 0 chr2 23196302 23196368 -230060215 + (CA)n Simple_repeat Simple_repeat 1 67 0 2120 160 36 0 chr2 23197272 23197603 -230058980 + MER2 DNA MER2_type 2 344 0 684 241 52 29 chr2 23197630 23197804 -230058779 - MER45A DNA AcHobo 0 178 1 281 250 0 0 chr2 23197804 23197860 -230058723 - MIR3 SINE MIR -38 170 115 445 284 34 7 chr2 23197946 23198094 -230058489 + MIR SINE MIR 65 216 -46 224 299 104 104 chr2 23198379 23198523 -230058060 + MER5A DNA MER1_type 46 189 0 2128 129 3 3 chr2 23199067 23199245 -230057338 - AluSx SINE Alu -3 309 129 285 51 0 0 chr2 23199245 23199284 -230057299 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2128 129 3 3 chr2 23199284 23199414 -230057169 - AluSx SINE Alu -182 130 1 192 204 76 134 chr2 23200053 23200210 -230056373 + L2 LINE L2 3090 3237 -76 1846 185 36 11 chr2 23200567 23200923 -230055660 - MLT1A1 LTR MaLR 0 365 1 281 178 0 0 chr2 23201108 23201153 -230055430 + L2 LINE L2 3227 3271 -1 2188 94 17 0 chr2 23201350 23201637 -230054946 + AluSx SINE Alu 10 301 -11 225 339 129 29 chr2 23202577 23202857 -230053726 + L2 LINE L2 2965 3272 0 26 30 0 0 chr2 23202975 23203008 -230053575 + AT_rich Low_complexity Low_complexity 1 33 0 1200 189 8 89 chr2 23203345 23203584 -230052999 + MER33 DNA MER1_type 1 196 -2389 1963 158 3 0 chr2 23203584 23204073 -230052510 + AluSx SINE Alu 1 490 0 1200 189 8 89 chr2 23204073 23204193 -230052390 + MER33 DNA MER1_type 196 324 0 606 286 83 5 chr2 23204992 23205209 -230051374 - MLT1B LTR MaLR -1 566 333 230 308 42 17 chr2 23206747 23206867 -230049716 + L2 LINE L2 2453 2575 -739 880 268 104 45 chr2 23206900 23207344 -230049239 + MLT2B1 LTR ERVL 5 474 -46 35 71 0 0 chr2 23207347 23207417 -230049166 + AT_rich Low_complexity Low_complexity 1 70 0 354 60 90 0 chr2 23207424 23207524 -230049059 + (TA)n Simple_repeat Simple_repeat 2 110 0 239 214 14 0 chr2 23207527 23207597 -230048986 + MLT2B1 LTR ERVL 450 520 0 1687 207 21 54 chr2 23207597 23207983 -230048600 - MLT1B LTR MaLR -17 373 1 35 71 0 0 chr2 23208758 23208828 -230047755 + AT_rich Low_complexity Low_complexity 1 70 0 100 95 0 0 chr2 23208829 23209125 -230047458 + AT_rich Low_complexity Low_complexity 1 296 0 286 243 81 75 chr2 23211625 23211798 -230044785 - MIR3 SINE MIR -21 187 14 240 330 18 37 chr2 23213630 23213848 -230042735 + L1ME LINE L1 5562 5775 -387 2113 139 0 0 chr2 23213958 23214260 -230042323 + AluSg SINE Alu 1 302 -8 353 288 85 8 chr2 23214497 23214615 -230041968 - L2 LINE L2 0 3313 3187 365 313 8 0 chr2 23215838 23215972 -230040611 + L1ME1 LINE L1 5577 5711 -410 21 36 0 0 chr2 23216832 23216860 -230039723 + AT_rich Low_complexity Low_complexity 1 28 0 2139 100 7 0 chr2 23216895 23217175 -230039408 - AluSx SINE Alu -14 298 17 260 302 32 24 chr2 23217178 23217304 -230039279 + MIR SINE MIR 73 199 -63 740 244 51 51 chr2 23218425 23218736 -230037847 + MLT1I LTR MaLR 96 406 -3 502 292 76 11 chr2 23218919 23219104 -230037479 + MIR SINE MIR 11 207 -55 22 56 0 0 chr2 23219136 23219172 -230037411 + AT_rich Low_complexity Low_complexity 1 36 0 198 413 14 22 chr2 23219412 23219550 -230037033 - L2 LINE L2 -940 2374 2238 268 317 50 59 chr2 23220433 23220654 -230035929 - L2 LINE L2 -428 2886 2668 1678 157 17 9 chr2 23221909 23222461 -230034122 + L1M1 LINE L1 4970 5527 -743 2248 240 86 19 chr2 23222713 23223409 -230033174 - L1ME1 LINE L1 -4 6162 5420 283 200 136 9 chr2 23223415 23223525 -230033058 - L1ME1 LINE L1 0 6166 6043 3108 125 33 2 chr2 23223641 23224154 -230032429 - L1MA3 LINE L1 0 6305 5777 641 127 5 196 chr2 23224162 23224382 -230032201 + 7SK RNA RNA 15 192 -1 1432 232 65 18 chr2 23224385 23224897 -230031686 - L1ME1 LINE L1 -733 5433 4901 1155 258 78 5 chr2 23224905 23225301 -230031282 + L1ME1 LINE L1 5738 6162 -4 316 148 35 61 chr2 23225874 23225989 -230030594 + (TATAA)n Simple_repeat Simple_repeat 5 116 0 23 33 0 0 chr2 23226196 23226226 -230030357 + AT_rich Low_complexity Low_complexity 1 30 0 1980 147 7 3 chr2 23226516 23226823 -230029760 + AluSx SINE Alu 1 308 -4 23 0 0 0 chr2 23227267 23227290 -230029293 + AT_rich Low_complexity Low_complexity 1 23 0 2145 106 3 3 chr2 23227373 23227665 -230028918 - AluSx SINE Alu -20 292 1 21 71 0 0 chr2 23227748 23227790 -230028793 + AT_rich Low_complexity Low_complexity 1 42 0 624 346 51 21 chr2 23228091 23228577 -230028006 - LTR33 LTR ERVL 0 521 21 2506 299 33 56 chr2 23228751 23229260 -230027323 - L2 LINE L2 -688 2626 2150 608 102 51 0 chr2 23229260 23229358 -230027225 + L1PA14 LINE L1 6059 6161 0 2506 299 33 56 chr2 23229358 23229849 -230026734 - L2 LINE L2 -1164 2150 1649 264 350 127 35 chr2 23231657 23231917 -230024666 + L2 LINE L2 2812 3095 -177 307 274 71 9 chr2 23232786 23232899 -230023684 - MIR SINE MIR -62 200 81 200 312 39 26 chr2 23232908 23232985 -230023598 + L2 LINE L2 3236 3313 0 1999 137 7 0 chr2 23234018 23234310 -230022273 + AluSq SINE Alu 1 294 -19 234 294 49 39 chr2 23234961 23235063 -230021520 - MIR3 SINE MIR -94 114 12 182 338 103 0 chr2 23235580 23235648 -230020935 + L2 LINE L2 3116 3190 -82 287 376 73 47 chr2 23236536 23237098 -230019485 + L2 LINE L2 2696 3267 -5 245 376 67 61 chr2 23237242 23237617 -230018966 + L3 LINE CR1 126 502 -1075 1533 243 63 22 chr2 23237637 23238188 -230018395 + L1MCc LINE L1 389 962 -4946 834 236 32 23 chr2 23238191 23238407 -230018176 + MER58A DNA MER1_type 6 223 -1 340 216 85 81 chr2 23238460 23238743 -230017840 + L1MCc LINE L1 1076 1528 -5079 902 322 154 43 chr2 23238767 23239617 -230016966 + L3 LINE CR1 530 1473 -104 443 321 44 0 chr2 23239775 23239934 -230016649 - L2 LINE L2 -934 2380 2215 846 184 54 38 chr2 23239949 23240188 -230016395 - MER33 DNA MER1_type -81 243 1 282 306 112 15 chr2 23240250 23240384 -230016199 - L2 LINE L2 -1215 2099 1953 586 183 111 151 chr2 23243420 23243573 -230013010 - MIR SINE MIR -10 252 111 1890 177 0 3 chr2 23243573 23243878 -230012705 + AluJb SINE Alu 8 311 -1 586 183 111 151 chr2 23243878 23243976 -230012607 - MIR SINE MIR -151 111 11 639 153 0 9 chr2 23243983 23244094 -230012489 - AluSp SINE Alu -203 110 1 760 86 0 0 chr2 23244621 23244726 -230011857 + L1PA5 LINE L1 6047 6151 -3 189 0 0 0 chr2 23244766 23244787 -230011796 + (A)n Simple_repeat Simple_repeat 1 21 0 4028 110 40 12 chr2 23244887 23245569 -230011014 + L1MA2 LINE L1 5604 6304 0 534 267 45 95 chr2 23248739 23249021 -230007562 + MER5C DNA MER1_type 3 298 -26 296 24 24 0 chr2 23249021 23249062 -230007521 + (TAGA)n Simple_repeat Simple_repeat 3 44 0 2389 60 0 3 chr2 23249067 23249374 -230007209 + AluY SINE Alu 1 306 0 534 267 45 95 chr2 23249374 23249421 -230007162 + MER5C DNA MER1_type 302 322 -2 332 283 28 38 chr2 23249450 23249556 -230007027 + L2 LINE L2 3168 3272 -41 324 0 0 0 chr2 23249560 23249596 -230006987 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 1722 269 61 20 chr2 23250192 23250747 -230005836 - MLT1G LTR MaLR -3 587 10 5552 115 7 16 chr2 23250911 23251830 -230004753 + L1PA13 LINE L1 5254 6163 0 994 236 140 12 chr2 23252054 23252389 -230004194 + L1MC4 LINE L1 7207 7584 -458 982 113 7 1 chr2 23252431 23252592 -230003991 + L1PA13 LINE L1 5754 5913 -250 314 211 23 83 chr2 23252595 23252728 -230003855 + L1MC4 LINE L1 7918 8042 0 573 272 57 59 chr2 23252977 23253424 -230003159 - MLT1J LTR MaLR 0 511 4 230 237 0 17 chr2 23253732 23253791 -230002792 + (CA)n Simple_repeat Simple_repeat 1 58 0 802 257 59 0 chr2 23254856 23255093 -230001490 + MIR SINE MIR 4 254 -8 233 57 29 0 chr2 23255094 23255129 -230001454 + (TTA)n Simple_repeat Simple_repeat 3 38 0 198 364 16 25 chr2 23255144 23255265 -230001318 - L2 LINE L2 -1406 1908 1789 225 320 67 0 chr2 23255479 23255595 -230000988 - MIR SINE MIR -66 142 74 2190 96 0 68 chr2 23255620 23255943 -230000640 - AluSx SINE Alu -11 301 1 1939 136 39 0 chr2 23256778 23257064 -229999519 - AluSg SINE Alu -13 297 1 1526 177 51 77 chr2 23257369 23257877 -229998706 - MLT1D LTR MaLR -5 500 6 305 278 22 0 chr2 23259917 23260007 -229996576 + L1ME4a LINE L1 5770 5861 -260 33 25 0 0 chr2 23260102 23260142 -229996441 + AT_rich Low_complexity Low_complexity 1 40 0 243 88 0 0 chr2 23260274 23260308 -229996275 + (CATATA)n Simple_repeat Simple_repeat 2 35 0 329 321 22 22 chr2 23261274 23261411 -229995172 + MIR SINE MIR 36 172 -90 1133 225 48 16 chr2 23261412 23261786 -229994797 + MER74C LTR ERVL 4 538 -84 2259 113 0 0 chr2 23261936 23262237 -229994346 + AluSx SINE Alu 1 301 -11 246 308 31 8 chr2 23262378 23262508 -229994075 + MLT1J2 LTR MaLR 46 178 -272 2268 252 107 87 chr2 23263013 23263754 -229992829 + L1ME1 LINE L1 36 760 -5475 846 64 112 0 chr2 23263754 23263879 -229992704 + MER85 DNA T2_type 1 139 0 2268 252 107 87 chr2 23263879 23264605 -229991978 + L1ME1 LINE L1 760 1470 -4765 2281 91 3 0 chr2 23264605 23264892 -229991691 + AluSg SINE Alu 1 288 -22 2268 252 107 87 chr2 23264892 23265410 -229991173 + L1ME1 LINE L1 1470 1976 -4259 411 255 52 83 chr2 23265410 23265602 -229990981 - MER5A DNA MER1_type -1 188 3 2268 252 107 87 chr2 23265602 23267043 -229989540 + L1ME1 LINE L1 1976 3386 -2849 587 69 0 35 chr2 23267043 23267130 -229989453 - AluSc SINE Alu -6 303 220 2268 252 107 87 chr2 23267130 23267606 -229988977 + L1ME1 LINE L1 3386 3851 -2384 2406 92 3 0 chr2 23267606 23267912 -229988671 - AluSc SINE Alu -2 307 1 2268 252 107 87 chr2 23267912 23268124 -229988459 + L1ME1 LINE L1 3851 4057 -2178 1538 188 0 8 chr2 23268124 23268390 -229988193 + AluJo SINE Alu 1 264 -48 2268 252 107 87 chr2 23268390 23270282 -229986301 + L1ME1 LINE L1 4057 6216 -19 513 320 70 10 chr2 23270681 23270881 -229985702 + MIR SINE MIR 47 258 -4 48 43 0 0 chr2 23271029 23271098 -229985485 + AT_rich Low_complexity Low_complexity 1 69 0 372 237 58 36 chr2 23272422 23272561 -229984022 + MLT1J2 LTR MaLR 67 208 -242 349 163 0 62 chr2 23272692 23272772 -229983811 + MLT1I LTR MaLR 335 409 0 257 248 76 102 chr2 23273010 23273167 -229983416 - MIR SINE MIR -77 185 33 519 240 97 40 chr2 23274043 23274218 -229982365 + MIR SINE MIR 29 213 -49 203 194 0 0 chr2 23274218 23274254 -229982329 + (TA)n Simple_repeat Simple_repeat 1 36 0 321 175 0 18 chr2 23274400 23274457 -229982126 + L2 LINE L2 3254 3309 -4 298 241 17 0 chr2 23274834 23274892 -229981691 - L3 LINE CR1 -7 1570 1512 6246 140 55 27 chr2 23275279 23275884 -229980699 - Tigger3b DNA MER2_type -1797 1231 645 2180 114 7 0 chr2 23275884 23276182 -229980401 + AluSx SINE Alu 1 300 -12 6246 140 55 27 chr2 23276182 23276211 -229980372 - Tigger3b DNA MER2_type -2383 645 618 246 32 0 0 chr2 23276211 23276242 -229980341 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 6246 140 55 27 chr2 23276242 23276279 -229980304 - Tigger3b DNA MER2_type -2410 618 584 2547 33 3 3 chr2 23276279 23276580 -229980003 + AluY SINE Alu 1 301 -10 6246 140 55 27 chr2 23276580 23277103 -229979480 - Tigger3b DNA MER2_type -2444 584 1 255 157 0 0 chr2 23277729 23277780 -229978803 + (TTCA)n Simple_repeat Simple_repeat 2 52 0 207 379 30 6 chr2 23278253 23278422 -229978161 - MIR SINE MIR -37 225 53 750 296 27 27 chr2 23282197 23282454 -229974129 - MIR SINE MIR 0 262 6 2063 107 30 10 chr2 23282546 23282846 -229973737 + AluSx SINE Alu 1 306 -6 400 296 146 10 chr2 23282957 23283163 -229973420 + MIR SINE MIR 6 239 -23 766 228 97 107 chr2 23284507 23284844 -229971739 - MLT1J2 LTR MaLR -16 434 100 1831 130 121 18 chr2 23284844 23285174 -229971409 + THE1B LTR MaLR 1 364 0 766 228 97 107 chr2 23285174 23285258 -229971325 - MLT1J2 LTR MaLR -350 100 17 211 189 75 19 chr2 23285262 23285315 -229971268 - L2 LINE L2 -209 3063 3008 1141 171 87 87 chr2 23286198 23286577 -229970006 - MLT1B LTR MaLR -11 379 1 22 35 0 0 chr2 23287695 23287724 -229968859 + AT_rich Low_complexity Low_complexity 1 29 0 235 234 0 0 chr2 23288172 23288219 -229968364 + (TG)n Simple_repeat Simple_repeat 1 47 0 552 224 0 0 chr2 23290957 23291073 -229965510 + MER94 DNA DNA 13 128 -6 222 323 0 0 chr2 23291443 23291505 -229965078 + MIR SINE MIR 183 244 -18 225 0 0 0 chr2 23291542 23291567 -229965016 + (CA)n Simple_repeat Simple_repeat 2 26 0 233 296 40 16 chr2 23291682 23291807 -229964776 + L1ME LINE L1 5695 5822 -299 493 303 45 90 chr2 23292086 23292353 -229964230 + L2 LINE L2 3014 3268 -4 470 302 34 39 chr2 23292686 23292865 -229963718 - MIR3 SINE MIR -10 198 21 343 340 101 44 chr2 23293870 23294417 -229962166 + L2 LINE L2 2674 3252 -20 561 239 0 67 chr2 23294505 23294685 -229961898 - L2 LINE L2 -9 3304 3137 495 336 41 41 chr2 23294816 23295185 -229961398 - L1ME LINE L1 -347 5774 5406 1289 218 140 21 chr2 23296017 23296928 -229959655 - L1ME1 LINE L1 -10 6156 5127 192 427 8 17 chr2 23297092 23297209 -229959374 + MIR SINE MIR 20 135 -73 879 175 21 0 chr2 23297219 23297383 -229959200 - FRAM SINE Alu 0 166 1 24 53 0 0 chr2 23297738 23297776 -229958807 + AT_rich Low_complexity Low_complexity 1 38 0 508 271 197 12 chr2 23298289 23298562 -229958021 + L2 LINE L2 2674 2995 -318 492 233 43 0 chr2 23298563 23298679 -229957904 - MER45A DNA AcHobo 0 178 58 341 107 18 0 chr2 23298697 23298753 -229957830 - THE1C LTR MaLR 0 375 319 180 77 0 0 chr2 23298756 23298782 -229957801 + (T)n Simple_repeat Simple_repeat 1 26 0 12103 13 0 0 chr2 23298782 23301018 -229955565 - L1HS LINE L1 0 6155 3920 2465 199 22 41 chr2 23301133 23301650 -229954933 - L1M1 LINE L1 -6980 585 79 2509 92 123 2 chr2 23301650 23302050 -229954533 + LTR7 LTR ERV1 1 448 -2 2465 199 22 41 chr2 23302050 23302115 -229954468 - L1M1 LINE L1 -7486 79 14 341 331 24 8 chr2 23303175 23303299 -229953284 - MIR SINE MIR -60 148 23 440 278 137 50 chr2 23303454 23303753 -229952830 - L2 LINE L2 -1 3312 2988 2198 121 3 9 chr2 23303778 23304118 -229952465 + THE1C LTR MaLR 1 338 -37 40719 32 26 1 chr2 23304118 23310118 -229946465 + L1PA2 LINE L1 6 6155 0 1694 212 127 97 chr2 23312097 23312941 -229943642 - L1MC4 LINE L1 -4 8038 7170 364 296 24 52 chr2 23313795 23313938 -229942645 + MIR SINE MIR 20 161 -65 440 292 118 50 chr2 23314039 23314361 -229942222 - L2 LINE L2 -126 3187 2844 679 252 97 26 chr2 23314402 23314628 -229941955 + MIR SINE MIR 21 262 0 251 288 150 0 chr2 23314743 23314823 -229941760 + L2 LINE L2 3160 3251 -21 433 241 35 64 chr2 23315823 23315964 -229940619 - MIR3 SINE MIR -3 205 69 275 286 53 105 chr2 23316143 23316276 -229940307 + MIR3 SINE MIR 44 169 -39 861 249 23 0 chr2 23316278 23316455 -229940128 - MER5A DNA MER1_type 0 189 9 1227 180 78 32 chr2 23317149 23317508 -229939075 + MSTC LTR MaLR 1 428 0 320 224 0 0 chr2 23318415 23318482 -229938101 + L1MB2 LINE L1 6069 6135 -36 771 175 8 0 chr2 23318501 23318627 -229937956 + L1MB5 LINE L1 6040 6166 -8 246 62 0 0 chr2 23318645 23318677 -229937906 + (CA)n Simple_repeat Simple_repeat 2 33 0 251 280 134 19 chr2 23318809 23318966 -229937617 + L2 LINE L2 665 839 -2475 202 250 26 0 chr2 23319810 23319886 -229936697 + (TA)n Simple_repeat Simple_repeat 1 78 0 2727 133 36 83 chr2 23319947 23320450 -229936133 - MLT2B1 LTR ERVL -41 479 1 276 137 0 0 chr2 23320460 23320511 -229936072 + (TA)n Simple_repeat Simple_repeat 2 52 0 1198 171 0 38 chr2 23320512 23320722 -229935861 - AluJb SINE Alu -23 289 88 683 229 91 97 chr2 23320801 23321037 -229935546 + MER46C DNA MER2_type 1 236 -102 316 0 0 43 chr2 23321037 23321083 -229935500 + (TG)n Simple_repeat Simple_repeat 2 45 0 683 229 91 97 chr2 23321083 23321186 -229935397 + MER46C DNA MER2_type 236 338 0 2027 171 42 21 chr2 23321392 23321608 -229934975 + MLT1B LTR MaLR 4 233 -157 2153 107 19 105 chr2 23321608 23322018 -229934565 - THE1C LTR MaLR 0 375 1 2027 171 42 21 chr2 23322018 23322180 -229934403 + MLT1B LTR MaLR 233 390 0 37 39 0 0 chr2 23323115 23323166 -229933417 + AT_rich Low_complexity Low_complexity 1 51 0 2363 73 3 13 chr2 23323816 23324119 -229932464 - AluSp SINE Alu -13 300 1 2238 245 61 11 chr2 23325609 23326165 -229930418 - MLT1E LTR MaLR -8 585 2 183 42 0 0 chr2 23327434 23327458 -229929125 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 228 333 14 62 chr2 23327528 23327672 -229928911 + MIR SINE MIR 41 177 -85 376 230 58 0 chr2 23329158 23329245 -229927338 + MER5A DNA MER1_type 16 107 -82 3150 168 59 35 chr2 23330374 23331303 -229925280 - L1MA9 LINE L1 -659 5653 4690 1950 154 0 18 chr2 23331285 23331616 -229924967 + L1MA9 LINE L1 5636 5960 -352 * 38869 40 27 3 chr2 23331719 23336477 -229920106 - L1P LINE L1 -1272 4874 3 268 231 0 44 chr2 23336530 23336621 -229919962 + T-rich Low_complexity Low_complexity 3 89 0 198 224 26 79 chr2 23337215 23337291 -229919292 - L2 LINE L2 -16 3256 3185 * 544 299 74 30 chr2 23337271 23337502 -229919081 + MIR SINE MIR 6 246 -16 266 285 91 31 chr2 23338353 23338649 -229917934 - L1ME LINE L1 -502 5619 5306 300 284 50 28 chr2 23338980 23339121 -229917462 - MLT1J LTR MaLR -2 509 366 2384 107 0 0 chr2 23340322 23340632 -229915951 - AluY SINE Alu -1 310 1 2559 243 103 26 chr2 23341073 23341770 -229914813 - MER21B LTR ERV1 -58 805 55 237 224 0 0 chr2 23341962 23342020 -229914563 + CT-rich Low_complexity Low_complexity 5 62 0 370 313 62 82 chr2 23342062 23342414 -229914169 - L2 LINE L2 -2 3270 2926 761 272 18 13 chr2 23342487 23342711 -229913872 - MIR SINE MIR -1 261 37 322 251 67 41 chr2 23342830 23343025 -229913558 + Charlie7 DNA MER1_type 2408 2607 -5 869 184 6 13 chr2 23343037 23343195 -229913388 + MER5A DNA MER1_type 1 157 -32 1697 206 51 49 chr2 23343937 23344428 -229912155 - Charlie4a DNA MER1_type 0 508 17 317 326 34 0 chr2 23344872 23344961 -229911622 - MIR3 SINE MIR -19 189 98 1393 247 161 21 chr2 23344963 23345448 -229911135 - MLT1H1 LTR MaLR -2 553 1 472 281 75 100 chr2 23345448 23345797 -229910786 - MLT1H1-int LTR MaLR 0 1371 1032 7690 133 25 14 chr2 23346342 23347016 -229909567 - L1MA2 LINE L1 0 7723 7058 3402 82 13 27 chr2 23347016 23347466 -229909117 - MLT2A1 LTR ERVL 0 444 1 7690 133 25 14 chr2 23347466 23349106 -229907477 - L1MA2 LINE L1 -665 7058 5383 4819 185 19 45 chr2 23349102 23350039 -229906544 - L1MA2 LINE L1 -6575 990 79 * 2648 93 128 2 chr2 23350039 23350437 -229906146 + LTR7 LTR ERV1 1 448 -2 4819 185 19 45 chr2 23350437 23350502 -229906081 - L1MA2 LINE L1 -7486 79 14 341 331 24 8 chr2 23351562 23351686 -229904897 - MIR SINE MIR -60 148 23 430 278 137 50 chr2 23351841 23352140 -229904443 - L2 LINE L2 -1 3312 2988 2675 125 5 8 chr2 23352165 23352541 -229904042 + THE1C LTR MaLR 1 375 0 539 233 43 0 chr2 23352559 23352675 -229903908 + MER45A DNA AcHobo 58 178 0 517 276 192 13 chr2 23352676 23352950 -229903633 - L2 LINE L2 -318 2995 2674 24 53 0 0 chr2 23353463 23353501 -229903082 + AT_rich Low_complexity Low_complexity 1 38 0 823 176 28 0 chr2 23353856 23354019 -229902564 + FRAM SINE Alu 1 166 0 183 342 60 68 chr2 23354029 23354146 -229902437 - MIR SINE MIR -73 135 20 1747 220 151 21 chr2 23354310 23355221 -229901362 + L1MC4 LINE L1 5127 6163 -21 1359 199 81 46 chr2 23356428 23356799 -229899784 + L1MA10 LINE L1 5943 6326 -8 2230 90 21 0 chr2 23356799 23357110 -229899473 - AluY SINE Alu 0 317 1 689 271 96 9 chr2 23357630 23357859 -229898724 - MLT1J2 LTR MaLR 0 450 202 435 221 139 0 chr2 23357889 23358011 -229898572 - MLT1J2 LTR MaLR -307 143 5 1068 176 62 59 chr2 23359125 23359414 -229897169 + MER33 DNA MER1_type 35 324 0 680 236 101 43 chr2 23359415 23359623 -229896960 + MIR SINE MIR 32 251 -11 183 262 66 0 chr2 23361219 23361280 -229895303 + L2 LINE L2 3234 3298 -15 195 100 0 0 chr2 23361368 23361398 -229895185 + (CA)n Simple_repeat Simple_repeat 2 31 0 1204 215 32 3 chr2 23362617 23363050 -229893533 + Charlie4a DNA MER1_type 21 495 -13 2141 112 3 26 chr2 23363249 23363552 -229893031 + AluSx SINE Alu 1 296 -16 254 311 144 20 chr2 23365096 23365418 -229891165 - L2 LINE L2 -202 3070 2712 310 341 95 0 chr2 23365479 23365605 -229890978 - L2 LINE L2 -946 2368 2231 259 279 70 23 chr2 23365705 23365791 -229890792 - MIR3 SINE MIR -7 201 112 22 35 0 0 chr2 23367774 23367803 -229888780 + AT_rich Low_complexity Low_complexity 1 29 0 580 243 25 55 chr2 23368494 23368696 -229887887 + L2 LINE L2 3109 3304 -9 1204 218 35 0 chr2 23368699 23368984 -229887599 + AluJo SINE Alu 1 295 -17 542 280 92 13 chr2 23370253 23370492 -229886091 + MIR SINE MIR 3 260 -2 2529 143 30 39 chr2 23371830 23372298 -229884285 - MLT2C2 LTR ERVL 0 464 1 1529 176 117 6 chr2 23373536 23373860 -229882723 - MER46B DNA MER2_type 0 236 2 293 194 97 65 chr2 23373790 23373883 -229882700 + MER46A DNA MER2_type 75 170 -66 * 848 183 0 33 chr2 23373906 23374086 -229882497 - AluJb SINE Alu -2 310 137 186 287 79 10 chr2 23374372 23374473 -229882110 + L2 LINE L2 3149 3256 -57 556 298 91 27 chr2 23374551 23374771 -229881812 - MIR SINE MIR 0 262 36 519 226 0 0 chr2 23376605 23376764 -229879819 + (TCCA)n Simple_repeat Simple_repeat 2 160 0 496 229 8 0 chr2 23376921 23377039 -229879544 + MIR SINE MIR 79 197 -65 242 246 31 15 chr2 23377041 23377106 -229879477 - MER113 DNA MER1_type? -1 520 455 1946 250 83 37 chr2 23377219 23377871 -229878712 + L1ME3A LINE L1 5208 5908 -262 1298 210 105 9 chr2 23377871 23378204 -229878379 - MLT1A1 LTR MaLR 0 365 1 1946 250 83 37 chr2 23378204 23378383 -229878200 + L1ME3A LINE L1 5908 6077 -93 877 298 28 0 chr2 23378563 23378781 -229877802 - MIR SINE MIR -37 225 2 345 47 0 0 chr2 23380204 23380247 -229876336 + (CA)n Simple_repeat Simple_repeat 2 44 0 206 305 17 0 chr2 23380623 23380682 -229875901 + L2 LINE L2 3207 3266 -6 281 377 82 7 chr2 23382661 23382807 -229873776 - MIR3 SINE MIR -23 185 29 1731 148 80 45 chr2 23382827 23383204 -229873379 + MLT1B LTR MaLR 1 390 0 620 293 6 6 chr2 23383397 23383571 -229873012 - MIR SINE MIR -85 177 4 383 319 12 62 chr2 23383573 23383684 -229872899 + L3 LINE CR1 1425 1527 -50 2237 117 0 0 chr2 23383684 23383993 -229872590 - AluSq SINE Alu -4 309 1 383 319 12 62 chr2 23383993 23384041 -229872542 + L3 LINE CR1 1527 1576 -1 348 24 0 0 chr2 23385440 23385481 -229871102 + (CCA)n Simple_repeat Simple_repeat 2 42 0 361 289 37 15 chr2 23385711 23385846 -229870737 - MIR3 SINE MIR -63 145 8 222 286 47 45 chr2 23386407 23386650 -229869933 + L2 LINE L2 2712 2960 -312 21 0 0 0 chr2 23387273 23387294 -229869289 + AT_rich Low_complexity Low_complexity 1 21 0 209 352 114 0 chr2 23387311 23387416 -229869167 - MIR3 SINE MIR -1 207 91 2155 110 0 25 chr2 23387950 23388268 -229868315 - AluSx SINE Alu -2 310 1 2384 162 24 75 chr2 23388683 23389142 -229867441 + MLT1D LTR MaLR 1 431 -74 3762 81 2 2 chr2 23389142 23389638 -229866945 - L1PA13 LINE L1 -3 6160 5665 2384 162 24 75 chr2 23389638 23389710 -229866873 + MLT1D LTR MaLR 431 505 0 656 261 26 13 chr2 23389710 23389863 -229866720 - MIR SINE MIR -106 156 2 2523 185 69 42 chr2 23390057 23390637 -229865946 + L1MB5 LINE L1 5535 6133 -41 4273 51 2 6 chr2 23390637 23391166 -229865417 + L1PA8 LINE L1 5639 6165 -7 2523 185 69 42 chr2 23391166 23391197 -229865386 + L1MB5 LINE L1 6133 6162 -12 2311 175 8 25 chr2 23391202 23391677 -229864906 - L1MB5 LINE L1 -173 6001 5535 368 0 0 60 chr2 23391690 23391740 -229864843 + L1PA8 LINE L1 6120 6166 -6 23 0 0 0 chr2 23391761 23391784 -229864799 + AT_rich Low_complexity Low_complexity 1 23 0 244 309 12 25 chr2 23391806 23391887 -229864696 - L2 LINE L2 -219 3053 2974 315 343 67 0 chr2 23393286 23393391 -229863192 - MIR SINE MIR -10 252 141 208 253 288 39 chr2 23393385 23393642 -229862941 + L2 LINE L2 1777 2097 -1217 * 471 281 234 5 chr2 23393662 23393854 -229862729 + MIR SINE MIR 10 245 -17 1469 291 103 34 chr2 23393909 23394672 -229861911 + L2 LINE L2 2110 2925 -389 908 196 60 25 chr2 23394686 23394824 -229861759 - Charlie4a DNA MER1_type -1460 501 369 832 138 22 7 chr2 23394824 23394962 -229861621 + L1MC1 LINE L1 6193 6332 -1 908 196 60 25 chr2 23394962 23395128 -229861455 - Charlie4a DNA MER1_type -1592 369 141 187 331 75 50 chr2 23395280 23395440 -229861143 + L2 LINE L2 3078 3241 -72 204 40 0 0 chr2 23395838 23395863 -229860720 + (ATG)n Simple_repeat Simple_repeat 3 27 0 248 242 231 0 chr2 23395875 23395966 -229860617 - MIR SINE MIR -44 218 107 219 222 0 0 chr2 23396442 23396487 -229860096 + (TTAGGG)n Simple_repeat Simple_repeat 3 47 0 378 42 0 0 chr2 23397113 23397161 -229859422 + (A)n Simple_repeat Simple_repeat 1 48 0 1624 130 163 71 chr2 23397451 23397843 -229858740 + MSTA LTR MaLR 1 428 0 260 244 122 57 chr2 23398066 23398189 -229858394 + MIR3 SINE MIR 41 171 -37 420 321 177 18 chr2 23398997 23399274 -229857309 - MLT1J2 LTR MaLR -49 401 81 334 286 10 10 chr2 23399476 23399574 -229857009 + MER8 DNA MER2_type 1 98 -141 567 216 199 85 chr2 23401373 23401771 -229854812 - MLT1J LTR MaLR -54 457 15 321 155 0 0 chr2 23402206 23402264 -229854319 + GA-rich Low_complexity Low_complexity 4 61 0 318 108 215 0 chr2 23404193 23404258 -229852325 - MADE1 DNA Mariner -1 79 1 1846 176 76 58 chr2 23404967 23405416 -229851167 + MLT1C LTR MaLR 3 459 -8 471 35 0 0 chr2 23405601 23405658 -229850925 + (CA)n Simple_repeat Simple_repeat 2 58 0 1977 138 3 0 chr2 23405761 23406052 -229850531 - AluJb SINE Alu -20 292 1 266 284 39 20 chr2 23408643 23408745 -229847838 - MER5B DNA MER1_type -57 121 18 430 214 51 51 chr2 23409496 23409613 -229846970 + MER5B DNA MER1_type 3 119 -59 2215 85 3 3 chr2 23409723 23410016 -229846567 + AluSp SINE Alu 1 293 -20 2193 153 18 10 chr2 23410143 23410530 -229846053 + MLT1B LTR MaLR 1 390 0 31 0 0 0 chr2 23411136 23411167 -229845416 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr2 23411834 23411856 -229844727 + AT_rich Low_complexity Low_complexity 1 22 0 218 31 0 31 chr2 23412081 23412113 -229844470 + (CAAAAA)n Simple_repeat Simple_repeat 3 33 0 661 245 80 0 chr2 23412546 23412697 -229843886 + MER96 DNA MER1_type? 12 174 -1 293 314 146 29 chr2 23412857 23413137 -229843446 + L2 LINE L2 2387 2699 -615 * 931 247 6 0 chr2 23413122 23413300 -229843283 + MER5A DNA MER1_type 11 189 0 236 130 0 87 chr2 23414930 23414976 -229841607 + L2 LINE L2 3231 3272 0 202 322 74 33 chr2 23415400 23415521 -229841062 - L2 LINE L2 -467 2847 2722 259 298 114 46 chr2 23415691 23415953 -229840630 - L2 LINE L2 -832 2482 2203 447 335 116 14 chr2 23417126 23417341 -229839242 + L2 LINE L2 3036 3272 0 205 247 82 21 chr2 23418415 23418512 -229838071 + MIR SINE MIR 79 181 -81 451 248 35 64 chr2 23419199 23419401 -229837182 + L1MC5 LINE L1 7698 7893 -68 21 0 0 0 chr2 23419496 23419517 -229837066 + AT_rich Low_complexity Low_complexity 1 21 0 186 237 0 0 chr2 23421646 23421684 -229834899 + L2 LINE L2 3217 3254 -18 308 287 116 53 chr2 23422800 23423463 -229833120 - L1M4 LINE L1 -1556 4590 3886 1249 255 41 11 chr2 23423913 23424282 -229832301 + L1M4 LINE L1 4724 5103 -1043 * 7613 235 61 19 chr2 23424280 23426718 -229829865 - L1M4c LINE L1 -1641 5316 2819 1770 111 15 0 chr2 23426718 23426980 -229829603 - L1MA2 LINE L1 0 6304 6039 7613 235 61 19 chr2 23426980 23427065 -229829518 - L1M4c LINE L1 -4138 2819 2739 328 22 0 0 chr2 23427345 23427390 -229829193 - AluY SINE Alu 0 300 256 6900 232 55 27 chr2 23427485 23429935 -229826648 - L1M4c LINE L1 -4453 2685 9 1838 197 42 3 chr2 23430860 23431195 -229825388 + MER7A DNA MER2_type 1 346 0 439 270 40 16 chr2 23431826 23431952 -229824631 + L2 LINE L2 3180 3308 -5 2291 138 19 50 chr2 23432338 23432714 -229823869 - THE1B LTR MaLR 0 364 1 12083 98 22 5 chr2 23432714 23434267 -229822316 - THE1B-int LTR MaLR 0 1580 1 2360 115 33 36 chr2 23434267 23434632 -229821951 - THE1B LTR MaLR 0 364 1 225 178 0 0 chr2 23434726 23434771 -229821812 + GA-rich Low_complexity Low_complexity 1 45 0 1962 180 44 31 chr2 23434775 23435311 -229821272 + MLT2A2 LTR ERVL 5 554 0 425 188 0 10 chr2 23435318 23435414 -229821169 + GA-rich Low_complexity Low_complexity 3 97 0 21 0 0 0 chr2 23435891 23435912 -229820671 + AT_rich Low_complexity Low_complexity 1 21 0 408 20 0 0 chr2 23435943 23435992 -229820591 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 545 308 43 0 chr2 23437222 23437407 -229819176 - MIR SINE MIR -21 241 49 428 351 53 61 chr2 23438628 23438987 -229817596 - L2 LINE L2 -14 3258 2903 452 275 106 25 chr2 23440209 23440369 -229816214 + MIR SINE MIR 8 180 -82 269 246 18 109 chr2 23440756 23440866 -229815717 - MIR SINE MIR -56 206 107 25 31 0 0 chr2 23443545 23443577 -229813006 + AT_rich Low_complexity Low_complexity 1 32 0 3892 245 41 8 chr2 23444008 23445065 -229811518 - L1M4 LINE L1 -1612 4534 3443 2334 216 55 24 chr2 23445066 23445293 -229811290 + L1M2 LINE L1 1547 1765 -5084 1864 181 0 6 chr2 23445293 23445607 -229810976 + AluJb SINE Alu 1 312 0 2334 216 55 24 chr2 23445607 23446051 -229810532 + L1M2 LINE L1 1765 2239 -4610 363 265 0 10 chr2 23446037 23446132 -229810451 + L1PB4 LINE L1 6054 6149 -7 * 955 68 0 0 chr2 23446132 23446249 -229810334 + L1PA10 LINE L1 6050 6166 -2 5003 226 40 13 chr2 23446271 23447452 -229809131 - L1MCb LINE L1 -4851 1194 3 190 261 87 0 chr2 23447467 23447513 -229809070 + MIR SINE MIR 97 146 -116 964 218 9 28 chr2 23450182 23450398 -229806185 + MIR SINE MIR 41 252 -10 5563 105 13 20 chr2 23453723 23454551 -229802032 - L1PA10 LINE L1 -3 6165 5344 7968 119 13 1 chr2 23454653 23455839 -229800744 - L1PA10 LINE L1 -873 5273 4074 265 326 56 21 chr2 23458640 23458784 -229797799 - L3 LINE CR1 -142 1435 1287 730 159 24 0 chr2 23458858 23458984 -229797599 - LTR40a LTR ERVL 0 519 391 579 329 81 0 chr2 23459307 23459517 -229797066 - MIR SINE MIR 0 262 36 237 360 83 12 chr2 23459875 23460050 -229796533 + MIR SINE MIR 25 211 -51 2340 113 0 3 chr2 23460614 23460924 -229795659 + AluSx SINE Alu 1 309 -3 369 0 0 0 chr2 23460949 23460990 -229795593 + (CA)n Simple_repeat Simple_repeat 2 42 0 192 341 66 0 chr2 23460993 23461084 -229795499 + L3 LINE CR1 846 942 -635 468 331 54 0 chr2 23461305 23461471 -229795112 + L3 LINE CR1 964 1138 -439 1091 224 35 38 chr2 23461493 23461806 -229794777 + LTR40a LTR ERVL 1 312 -207 351 260 188 61 chr2 23461922 23462295 -229794288 + L2 LINE L2 2638 3065 -248 2587 212 39 40 chr2 23462375 23462997 -229793586 - MLT1E3 LTR MaLR 0 624 4 225 228 38 51 chr2 23463016 23463095 -229793488 + L2 LINE L2 3182 3259 -13 2524 60 0 0 chr2 23463320 23463620 -229792963 + AluY SINE Alu 1 300 -11 25 0 0 0 chr2 23463625 23463650 -229792933 + AT_rich Low_complexity Low_complexity 1 25 0 252 59 0 0 chr2 23464969 23465003 -229791580 + (CAT)n Simple_repeat Simple_repeat 3 36 0 355 333 20 20 chr2 23465072 23465222 -229791361 + MIR SINE MIR 1 150 -112 214 383 42 0 chr2 23465684 23465804 -229790779 + MIR3 SINE MIR 35 159 -49 670 226 17 57 chr2 23466254 23466431 -229790152 + MER91B DNA MER1_type 19 188 -2 245 242 0 15 chr2 23467772 23467838 -229788745 + MER5B DNA MER1_type 1 65 -113 21 0 0 0 chr2 23467853 23467874 -229788709 + AT_rich Low_complexity Low_complexity 1 21 0 2292 93 19 0 chr2 23469165 23469475 -229787108 + L1PA10 LINE L1 5851 6166 -2 954 297 68 38 chr2 23470321 23470853 -229785730 + LTR67 LTR ERVL 8 555 -2 296 102 20 0 chr2 23470931 23470980 -229785603 + (CA)n Simple_repeat Simple_repeat 1 50 0 404 320 8 0 chr2 23471050 23471172 -229785411 - L2 LINE L2 0 3313 3191 189 74 0 0 chr2 23471255 23471282 -229785301 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 288 247 72 92 chr2 23472552 23472803 -229783780 + L2 LINE L2 3029 3274 -39 210 293 13 27 chr2 23472843 23472918 -229783665 - L3 LINE CR1 -654 923 850 495 148 12 0 chr2 23472924 23473005 -229783578 - AluSx SINE Alu -14 295 214 1139 136 0 0 chr2 23473006 23473160 -229783423 - AluSx SINE Alu -158 154 1 561 268 37 0 chr2 23476609 23476799 -229779784 + MIR SINE MIR 64 260 -2 275 300 94 47 chr2 23478041 23478338 -229778245 + L1ME4a LINE L1 5604 5914 -207 249 276 11 0 chr2 23478375 23478462 -229778121 + L1ME4a LINE L1 6000 6087 -34 1461 187 154 18 chr2 23478582 23478925 -229777658 - MLT1B LTR MaLR 0 390 1 948 98 11 7 chr2 23479529 23479816 -229776767 + (CA)n Simple_repeat Simple_repeat 1 288 0 664 240 54 36 chr2 23479850 23480071 -229776512 + MIR SINE MIR 37 261 -1 630 307 62 8 chr2 23480389 23480630 -229775953 + L3b LINE CR1 1306 1559 -24 1995 137 139 36 chr2 23481736 23482124 -229774459 - MSTA LTR MaLR 0 428 1 330 26 0 0 chr2 23484748 23484787 -229771796 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 750 212 114 10 chr2 23484928 23485121 -229771462 + LTR16A1 LTR ERVL 245 457 0 196 125 78 0 chr2 23485932 23485996 -229770587 + (CA)n Simple_repeat Simple_repeat 2 70 0 1736 178 10 3 chr2 23486675 23486973 -229769610 - AluJb SINE Alu -12 300 1 872 198 6 0 chr2 23487567 23487724 -229768859 + L1PB4 LINE L1 5968 6125 -31 413 141 28 0 chr2 23487774 23487845 -229768738 + L1PA16 LINE L1 6081 6153 -13 1732 174 27 48 chr2 23487920 23488293 -229768290 - MLT1A1 LTR MaLR 0 365 1 182 290 32 0 chr2 23488304 23488366 -229768217 + L2 LINE L2 3250 3313 0 785 226 39 85 chr2 23489139 23489338 -229767245 - L1ME LINE L1 -5746 324 142 1494 158 4 15 chr2 23489338 23489598 -229766985 - AluJb SINE Alu -55 257 1 785 226 39 85 chr2 23489598 23489704 -229766879 - L1ME LINE L1 -5928 142 33 223 319 22 22 chr2 23489826 23489917 -229766666 - L2 LINE L2 0 3272 3182 931 139 61 113 chr2 23490073 23490383 -229766200 + MER33 DNA MER1_type 31 324 0 1475 231 21 9 chr2 23490391 23490728 -229765855 - MER58B DNA MER1_type 0 341 1 550 286 6 23 chr2 23490861 23491036 -229765547 + MLT1H LTR MaLR 49 220 -329 265 261 65 66 chr2 23491170 23491330 -229765253 + MLT1H LTR MaLR 382 549 0 24 53 0 0 chr2 23491628 23491666 -229764917 + AT_rich Low_complexity Low_complexity 1 38 0 216 333 0 11 chr2 23492332 23492422 -229764161 + MIR3 SINE MIR 116 204 -4 430 317 60 33 chr2 23492954 23493254 -229763329 + L2 LINE L2 2622 2929 -385 324 0 0 0 chr2 23494268 23494304 -229762279 + (A)n Simple_repeat Simple_repeat 1 36 0 541 291 100 33 chr2 23495787 23496058 -229760525 - MER102b DNA MER1_type -3 338 50 236 224 17 0 chr2 23496349 23496407 -229760176 - LTR66 LTR ERVL -154 456 398 404 288 100 17 chr2 23496457 23496697 -229759886 - L2 LINE L2 -761 2553 2294 581 259 41 12 chr2 23498084 23498254 -229758329 + L1MCc LINE L1 26 200 -6223 763 256 66 36 chr2 23498938 23499368 -229757215 + L1MCc LINE L1 1129 1570 -4852 1051 245 109 85 chr2 23499646 23500338 -229756245 + L1MCc LINE L1 1864 2582 -4540 216 0 0 0 chr2 23500338 23500362 -229756221 + (CA)n Simple_repeat Simple_repeat 2 25 0 1051 245 109 85 chr2 23500362 23500518 -229756065 + L1MCc LINE L1 2582 2733 -4389 2327 135 3 6 chr2 23500520 23500882 -229755701 - MER46B DNA MER2_type 0 236 1 3589 269 74 15 chr2 23500957 23502632 -229753951 + L1MCc LINE L1 2747 4464 -2477 779 261 9 18 chr2 23502650 23502876 -229753707 - MIR SINE MIR -36 226 3 189 74 0 0 chr2 23503998 23504025 -229752558 + (TC)n Simple_repeat Simple_repeat 2 28 0 942 267 67 54 chr2 23504174 23504709 -229751874 + MER34 LTR ERV1 1 542 0 341 278 119 0 chr2 23506728 23506854 -229749729 - MIR3 SINE MIR -21 187 47 1025 125 6 6 chr2 23507928 23508088 -229748495 - L1PA10 LINE L1 -11 6157 5998 343 316 15 0 chr2 23508312 23508445 -229748138 + MIR SINE MIR 128 262 0 196 267 13 53 chr2 23508470 23508545 -229748038 + L3 LINE CR1 1340 1411 -166 180 291 102 47 chr2 23508666 23508709 -229747874 + MER5A DNA MER1_type 34 73 -116 2313 97 0 0 chr2 23508709 23508999 -229747584 + AluSc SINE Alu 1 290 -19 180 291 102 47 chr2 23508999 23509082 -229747501 + MER5A DNA MER1_type 73 167 -22 373 302 22 22 chr2 23509235 23509374 -229747209 + MIR SINE MIR 39 177 -85 207 0 0 0 chr2 23510535 23510558 -229746025 + (A)n Simple_repeat Simple_repeat 1 23 0 342 0 0 0 chr2 23510801 23510839 -229745744 + (TA)n Simple_repeat Simple_repeat 1 38 0 261 0 0 0 chr2 23510838 23510867 -229745716 + (GA)n Simple_repeat Simple_repeat 2 30 0 * 218 284 118 120 chr2 23510924 23511340 -229745243 - L2 LINE L2 -5 3267 2853 243 298 0 0 chr2 23512870 23512954 -229743629 - MIR3 SINE MIR -9 199 116 641 247 123 67 chr2 23513163 23513259 -229743324 - MLT1J2 LTR MaLR 0 428 339 991 215 34 130 chr2 23513259 23513673 -229742910 - MLT1A2 LTR MaLR 0 374 1 641 247 123 67 chr2 23513673 23513943 -229742640 - MLT1J2 LTR MaLR -89 339 67 516 244 262 0 chr2 23514128 23514300 -229742283 + MIR SINE MIR 1 217 -45 962 289 9 33 chr2 23515588 23515920 -229740663 + L1MEc LINE L1 8 331 -6065 1191 207 17 20 chr2 23515921 23516269 -229740314 + L1MEc LINE L1 1969 2315 -4081 * 1655 215 23 5 chr2 23516251 23516641 -229739942 + L1MEc LINE L1 3728 4124 -2091 1453 239 98 0 chr2 23516645 23517013 -229739570 + L1MD2 LINE L1 5952 6355 -4 457 189 31 24 chr2 23516997 23517124 -229739459 + L1MEc LINE L1 2271 2398 -3998 * 798 180 14 0 chr2 23517135 23517274 -229739309 + MER46A DNA MER2_type 22 162 -74 1180 202 11 74 chr2 23517308 23517660 -229738923 + L1MEc LINE L1 2361 2690 -3525 1251 252 47 36 chr2 23517670 23518146 -229738437 + L1ME1 LINE L1 5680 6329 -5 692 174 0 8 chr2 23518494 23518615 -229737968 + L2 LINE L2 3189 3308 -5 2404 152 48 33 chr2 23521488 23521948 -229734635 + MLT1C LTR MaLR 1 467 0 231 297 11 22 chr2 23522144 23522235 -229734348 + MIR SINE MIR 1 90 -172 422 254 219 12 chr2 23522903 23523072 -229733511 + MER63A DNA MER1_type 1 204 -6 289 306 41 0 chr2 23523991 23524089 -229732494 + MIR SINE MIR 43 144 -64 494 270 11 54 chr2 23525134 23525265 -229731318 - MIR SINE MIR -15 247 125 2011 121 30 3 chr2 23525265 23525562 -229731021 + AluSx SINE Alu 1 305 -7 494 270 11 54 chr2 23525562 23525615 -229730968 - MIR SINE MIR -137 125 71 643 271 134 29 chr2 23525617 23525960 -229730623 - MLT1J1 LTR MaLR 0 446 68 185 143 0 0 chr2 23526059 23526087 -229730496 - MIR SINE MIR -195 67 40 2064 242 75 17 chr2 23526580 23527114 -229729469 + MLT1F1 LTR MaLR 1 565 -2 1077 211 5 22 chr2 23527329 23527552 -229729031 + MER20B DNA MER1_type 1 219 0 986 219 149 54 chr2 23527778 23528167 -229728416 - MLT1J2 LTR MaLR -5 445 20 941 214 0 16 chr2 23530078 23530265 -229726318 + MER5A DNA MER1_type 6 189 0 408 344 56 11 chr2 23530382 23530562 -229726021 + MER91A DNA MER1_type 1 188 -8 211 353 0 0 chr2 23531628 23531696 -229724887 + GA-rich Low_complexity Low_complexity 4 71 0 456 297 22 22 chr2 23531916 23532098 -229724485 - MIR SINE MIR -69 193 12 265 220 34 0 chr2 23532325 23532384 -229724199 + L2 LINE L2 3248 3308 -5 220 307 100 14 chr2 23532411 23532551 -229724032 - MIR SINE MIR -15 247 96 1539 219 86 46 chr2 23532776 23533297 -229723286 - MLT1H1 LTR MaLR -13 542 1 546 260 154 45 chr2 23533367 23533908 -229722675 + MLT1G LTR MaLR 17 588 -2 1142 257 133 32 chr2 23534884 23535351 -229721232 + LTR33 LTR ERVL 1 514 -7 2862 9 6 0 chr2 23535799 23536122 -229720461 - L1PA2 LINE L1 0 6155 5831 186 43 0 0 chr2 23536346 23536369 -229720214 + (A)n Simple_repeat Simple_repeat 1 23 0 303 283 50 25 chr2 23538061 23538220 -229718363 + MER103 DNA DNA 1 163 -3 333 0 0 0 chr2 23538427 23538464 -229718119 + (CA)n Simple_repeat Simple_repeat 2 38 0 261 0 0 0 chr2 23538864 23538893 -229717690 + (CA)n Simple_repeat Simple_repeat 2 30 0 434 286 102 39 chr2 23540360 23540990 -229715593 + L1MEd LINE L1 884 1637 -853 205 109 43 0 chr2 23541072 23541118 -229715465 + (TA)n Simple_repeat Simple_repeat 2 49 0 3894 221 123 62 chr2 23541330 23542535 -229714048 + L1MC4 LINE L1 6460 7769 -273 2401 77 3 32 chr2 23542535 23542847 -229713736 - AluY SINE Alu -8 303 1 3894 221 123 62 chr2 23542847 23543077 -229713506 + L1MC4 LINE L1 7769 7983 -59 1632 230 45 15 chr2 23543321 23543790 -229712793 - MER20B DNA MER1_type -11 772 290 1748 232 32 34 chr2 23543792 23544288 -229712295 - MER20B DNA MER1_type -124 659 165 545 303 6 11 chr2 23548499 23548677 -229707906 - MER5B DNA MER1_type 0 178 2 2235 120 52 88 chr2 23550132 23550228 -229706355 + MSTC LTR MaLR 1 99 -329 2099 128 4 0 chr2 23550228 23550509 -229706074 + AluSx SINE Alu 1 282 -30 2235 120 52 88 chr2 23550509 23550853 -229705730 + MSTC LTR MaLR 99 425 -3 419 276 15 15 chr2 23552013 23552147 -229704436 - MER5B DNA MER1_type 0 178 45 2007 126 3 21 chr2 23552218 23552532 -229704051 + AluSx SINE Alu 1 309 0 1737 163 19 26 chr2 23552853 23553166 -229703417 + AluJo SINE Alu 1 311 -1 184 297 62 0 chr2 23553759 23553823 -229702760 + MIR SINE MIR 87 154 -108 326 335 157 12 chr2 23554033 23554352 -229702231 - L2 LINE L2 -5 3308 2944 210 358 58 7 chr2 23554517 23554654 -229701929 + L3 LINE CR1 733 876 -701 416 304 12 31 chr2 23554770 23554931 -229701652 + MER5B DNA MER1_type 21 178 0 1255 222 36 47 chr2 23555112 23555440 -229701143 - L1MEc LINE L1 -3571 2509 2184 2595 66 0 0 chr2 23555440 23555743 -229700840 - AluY SINE Alu -8 303 1 1255 222 36 47 chr2 23555743 23555779 -229700804 - L1MEc LINE L1 -3896 2184 2149 1005 85 8 0 chr2 23555780 23555909 -229700674 - AluY SINE Alu -181 130 1 757 199 9 87 chr2 23555912 23556047 -229700536 - L1MEc LINE L1 -4071 2190 2046 2137 159 81 8 chr2 23556047 23556444 -229700139 - MSTB LTR MaLR 0 426 1 757 199 9 87 chr2 23556444 23556589 -229699994 - L1MEc LINE L1 -4215 2046 1891 270 0 0 0 chr2 23556589 23556619 -229699964 + (TG)n Simple_repeat Simple_repeat 1 30 0 1214 170 58 0 chr2 23556624 23556830 -229699753 + MER20 DNA MER1_type 2 219 0 757 199 9 87 chr2 23556830 23556874 -229699709 - L1MEc LINE L1 -4330 1931 1885 4358 166 59 32 chr2 23556951 23557412 -229699171 - L1MB1 LINE L1 -29 6160 5713 1709 193 7 0 chr2 23557412 23557707 -229698876 + AluJo SINE Alu 1 297 -15 4358 166 59 32 chr2 23557707 23558230 -229698353 - L1MB1 LINE L1 -476 5713 5146 496 250 77 42 chr2 23558232 23558492 -229698091 - L1MEc LINE L1 -4929 1151 883 2944 220 71 24 chr2 23558505 23559099 -229697484 - L1ME1 LINE L1 -6 6160 5507 2283 114 0 16 chr2 23559099 23559414 -229697169 + AluSq SINE Alu 1 310 -3 2944 220 71 24 chr2 23559414 23559750 -229696833 - L1ME1 LINE L1 -659 5507 5188 * 41174 71 6 8 chr2 23559743 23565892 -229690691 - L1PA5 LINE L1 -1 6153 5 763 225 21 34 chr2 23565894 23566130 -229690453 - L1ME1 LINE L1 -944 5202 4970 1967 205 51 102 chr2 23566195 23566493 -229690090 - L1ME1 LINE L1 -1204 4942 4630 300 116 0 0 chr2 23566493 23566536 -229690047 - tRNA-Phe-TTC tRNA tRNA -32 44 2 1967 205 51 102 chr2 23566536 23566966 -229689617 - L1ME1 LINE L1 -1516 4630 4212 1346 227 82 51 chr2 23566958 23567492 -229689091 - L1MEc LINE L1 -5155 915 365 * 1175 145 100 10 chr2 23567492 23567692 -229688891 - MSTA LTR MaLR 0 428 211 2159 178 8 13 chr2 23568395 23568782 -229687801 + MLT1B LTR MaLR 6 390 0 181 391 25 6 chr2 23570949 23571110 -229685473 + L2 LINE L2 2915 3078 -194 1145 185 17 98 chr2 23572266 23572421 -229684162 + MER33 DNA MER1_type 2 115 -2470 2262 136 0 0 chr2 23572421 23572731 -229683852 + AluSx SINE Alu 1 310 -2 1145 185 17 98 chr2 23572731 23572921 -229683662 + MER33 DNA MER1_type 115 319 -5 2020 110 7 7 chr2 23574303 23574615 -229681968 + AluY SINE Alu 1 312 0 1034 131 258 4 chr2 23574704 23574956 -229681627 - Charlie1 DNA MER1_type -136 2625 2310 1874 159 23 7 chr2 23575374 23575682 -229680901 + AluSq SINE Alu 1 313 0 295 132 13 92 chr2 23575770 23575846 -229680737 + L2 LINE L2 3203 3272 0 21 36 0 0 chr2 23575963 23575991 -229680592 + AT_rich Low_complexity Low_complexity 1 28 0 371 224 102 68 chr2 23576858 23577005 -229679578 - MER5A DNA MER1_type -37 152 1 44106 30 23 2 chr2 23578706 23584316 -229672267 + L1P1 LINE L1 2 5731 -424 181 211 19 39 chr2 23589172 23589224 -229667359 - MIR3 SINE MIR -37 171 121 2072 147 0 0 chr2 23589239 23589539 -229667044 + AluJo SINE Alu 2 301 -11 241 250 65 19 chr2 23594687 23594795 -229661788 - L1ME LINE L1 -279 6236 6124 1025 186 0 0 chr2 23594950 23595111 -229661472 + FAM SINE Alu 9 169 -16 2476 83 0 0 chr2 23595116 23595417 -229661166 + AluSg SINE Alu 1 301 -9 7709 246 81 28 chr2 23595670 23597560 -229659023 + L1MEc LINE L1 42 1831 -4384 596 238 4 144 chr2 23597560 23597644 -229658939 + MER58A DNA MER1_type 4 98 -2322 2244 105 10 3 chr2 23597644 23597948 -229658635 + AluSq SINE Alu 1 306 -7 596 238 4 144 chr2 23597948 23598119 -229658464 + MER58A DNA MER1_type 98 223 -1 7709 246 81 28 chr2 23598119 23600599 -229655984 + L1MEc LINE L1 1831 4179 -2036 2352 103 0 0 chr2 23600599 23600899 -229655684 + AluSg SINE Alu 1 300 -10 7709 246 81 28 chr2 23600899 23601320 -229655263 + L1MEc LINE L1 4179 4576 -1639 2133 132 3 0 chr2 23601320 23601623 -229654960 + AluSx SINE Alu 1 304 -8 7709 246 81 28 chr2 23601623 23601823 -229654760 + L1MEc LINE L1 4576 5268 -947 273 308 68 34 chr2 23601981 23602247 -229654336 - L1ME LINE L1 -551 5964 5690 304 254 42 83 chr2 23602277 23602470 -229654113 - L1ME4a LINE L1 -132 5989 5805 207 0 0 0 chr2 23604531 23604554 -229652029 + (CTG)n Simple_repeat Simple_repeat 1 23 0 323 242 95 87 chr2 23604728 23604980 -229651603 + HAL1b LINE L1 80 333 -1015 581 126 61 96 chr2 23655025 23655223 -229601360 - AluY SINE Alu -117 194 4 2742 258 61 28 chr2 23655244 23656644 -229599939 - L1MEc LINE L1 -2739 3801 2395 357 220 19 164 chr2 23656656 23656697 -229599886 - MER58C DNA MER1_type -2207 213 168 2339 104 0 0 chr2 23656697 23656996 -229599587 + AluSc SINE Alu 1 299 -10 357 220 19 164 chr2 23656996 23657168 -229599415 - MER58C DNA MER1_type -2252 168 31 2267 128 13 10 chr2 23657559 23657949 -229598634 - L1PB3 LINE L1 -7 6147 5757 334 217 57 9 chr2 23657963 23658069 -229598514 - L1MEc LINE L1 -4578 1962 1852 1195 188 50 56 chr2 23658189 23658236 -229598347 + MLT1A1 LTR MaLR 49 95 -270 575 52 39 0 chr2 23658236 23658313 -229598270 + MADE1 DNA Mariner 1 80 0 1195 188 50 56 chr2 23658313 23658345 -229598238 + MLT1A1 LTR MaLR 95 126 -239 2184 98 3 17 chr2 23658345 23658668 -229597915 - AluSg SINE Alu 0 310 1 1195 188 50 56 chr2 23658668 23658906 -229597677 + MLT1A1 LTR MaLR 126 365 0 233 236 69 0 chr2 23658908 23658980 -229597603 + MER110 LTR ERV1 415 491 0 235 233 19 19 chr2 23660617 23660720 -229595863 + (CCG)n Simple_repeat Simple_repeat 2 104 0 * 236 231 25 41 chr2 23660672 23660793 -229595790 + (CCCCAG)n Simple_repeat Simple_repeat 6 124 0 189 0 0 0 chr2 23660839 23660860 -229595723 + (CCG)n Simple_repeat Simple_repeat 2 22 0 275 225 14 0 chr2 23660953 23661024 -229595559 + GA-rich Low_complexity Low_complexity 1 72 0 217 206 64 50 chr2 23661137 23661278 -229595305 + (CCGGG)n Simple_repeat Simple_repeat 2 144 0 21 0 0 0 chr2 23661512 23661533 -229595050 + GC_rich Low_complexity Low_complexity 1 21 0 207 156 0 0 chr2 23662424 23662456 -229594127 + (CCG)n Simple_repeat Simple_repeat 3 34 0 22 0 0 0 chr2 23662490 23662512 -229594071 + GC_rich Low_complexity Low_complexity 1 22 0 994 193 24 107 chr2 23663025 23663362 -229593221 + MLT1A1 LTR MaLR 56 364 -1 1709 178 28 6 chr2 23663362 23663722 -229592861 + L1MA7 LINE L1 5923 6290 -1 2399 63 3 0 chr2 23664137 23664421 -229592162 - AluY SINE Alu -14 297 13 445 120 0 13 chr2 23665286 23665361 -229591222 + MER46A DNA MER2_type 97 170 -66 1182 150 5 5 chr2 23666274 23666467 -229590116 - LTR40a LTR ERVL -3 516 324 658 318 17 0 chr2 23667123 23667302 -229589281 - MIR SINE MIR -75 187 6 293 263 88 26 chr2 23667293 23667407 -229589176 + L3 LINE CR1 1298 1418 -159 * 369 0 0 0 chr2 23668832 23668873 -229587710 + (TG)n Simple_repeat Simple_repeat 2 42 0 515 214 183 0 chr2 23669199 23669330 -229587253 - MER5A DNA MER1_type -4 185 31 182 237 85 17 chr2 23670287 23670346 -229586237 - L2 LINE L2 -4 3309 3247 302 246 119 0 chr2 23670703 23670821 -229585762 + MIR SINE MIR 117 248 -14 2087 122 18 33 chr2 23670830 23671165 -229585418 + L1M2 LINE L1 5469 5798 -493 273 119 0 0 chr2 23672551 23672593 -229583990 + (T)n Simple_repeat Simple_repeat 1 42 0 570 153 71 0 chr2 23673185 23673283 -229583300 + AluJb SINE Alu 190 294 -18 273 233 0 0 chr2 23674087 23674177 -229582406 + (TA)n Simple_repeat Simple_repeat 2 91 0 2499 174 54 14 chr2 23674212 23674234 -229582349 - L1MB2 LINE L1 -28 6143 6123 2308 89 0 7 chr2 23674234 23674527 -229582056 - AluSx SINE Alu -11 301 11 2499 174 54 14 chr2 23674527 23675004 -229581579 - L1MB2 LINE L1 -48 6123 5624 2055 111 3 39 chr2 23675015 23675322 -229581261 - AluSp SINE Alu -17 296 1 455 283 90 6 chr2 23675526 23675692 -229580891 + MIR SINE MIR 9 188 -74 493 247 84 26 chr2 23676121 23676311 -229580272 - MIR SINE MIR -41 221 21 684 289 16 43 chr2 23677988 23678292 -229578291 + HAL1b LINE L1 352 647 -701 1659 200 114 47 chr2 23678345 23678794 -229577789 + MLT2B1 LTR ERVL 1 479 -41 1021 168 12 0 chr2 23678832 23678999 -229577584 + MER6B DNA MER2_type 1 169 -41 21 0 0 0 chr2 23679065 23679086 -229577497 + AT_rich Low_complexity Low_complexity 1 21 0 1269 233 128 49 chr2 23679221 23681433 -229575150 - L1ME2 LINE L1 -1 6163 3665 1370 242 132 19 chr2 23681439 23682084 -229574499 - L1ME2 LINE L1 -2954 3192 2475 2960 235 63 24 chr2 23682114 23682649 -229573934 - L1ME1 LINE L1 -5 6230 5718 2169 35 0 8 chr2 23682649 23682905 -229573678 - AluY SINE Alu -57 254 1 2960 235 63 24 chr2 23682905 23684001 -229572582 - L1ME1 LINE L1 -517 5718 4524 296 312 11 0 chr2 23684007 23684100 -229572483 - L1ME1 LINE L1 -2054 4161 4068 * 3122 226 45 45 chr2 23684097 23684224 -229572359 - L1ME1 LINE L1 -2953 3262 3137 808 284 62 0 chr2 23684224 23684435 -229572148 - MER58A DNA MER1_type 0 224 1 3122 226 45 45 chr2 23684435 23685949 -229570634 - L1ME1 LINE L1 -3078 3137 1450 301 329 41 27 chr2 23686385 23686531 -229570052 - L1ME1 LINE L1 -4926 1279 1132 238 226 157 10 chr2 23686560 23686662 -229569921 - L1M3de LINE L1 -4700 1953 1837 809 168 7 0 chr2 23686664 23686819 -229569764 + CT-rich Low_complexity Low_complexity 4 159 0 1639 186 0 20 chr2 23686824 23687120 -229569463 - AluJo SINE Alu -22 290 1 322 334 100 26 chr2 23687120 23687426 -229569157 - L1ME1 LINE L1 -5321 1075 747 475 309 29 56 chr2 23687841 23688181 -229568402 - L1ME1 LINE L1 -5738 467 137 952 265 105 47 chr2 23689162 23689630 -229566953 + LTR33A LTR ERVL 23 517 -6 494 229 46 46 chr2 23689744 23689875 -229566708 - L2 LINE L2 -4 3268 3138 344 271 0 34 chr2 23689926 23690044 -229566539 + MIR SINE MIR 26 139 -123 220 283 57 47 chr2 23690421 23690527 -229566056 + L2 LINE L2 2994 3100 -172 405 70 0 0 chr2 23690541 23690598 -229565985 + (CAT)n Simple_repeat Simple_repeat 1 57 0 330 45 0 0 chr2 23690758 23690802 -229565781 + (TG)n Simple_repeat Simple_repeat 2 45 0 355 325 78 6 chr2 23691373 23691539 -229565044 - MIR3 SINE MIR -1 207 30 2105 112 31 17 chr2 23692653 23692947 -229563636 + AluSx SINE Alu 1 298 -14 603 201 35 114 chr2 23694457 23694746 -229561837 - L1MEc LINE L1 -5135 1261 996 512 323 26 5 chr2 23694761 23694956 -229561627 - MER58C DNA MER1_type 0 215 17 2238 233 79 79 chr2 23694974 23695060 -229561523 - L1MEc LINE L1 -5421 975 890 300 27 0 0 chr2 23695060 23695097 -229561486 + (ATTG)n Simple_repeat Simple_repeat 2 38 0 2238 233 79 79 chr2 23695097 23695964 -229560619 - L1MEc LINE L1 -5505 891 22 1638 109 0 0 chr2 23696145 23696356 -229560227 - AluSg/x SINE Alu -10 300 90 1001 273 93 14 chr2 23697554 23697909 -229558674 - LTR16B LTR ERVL -8 456 74 1315 176 9 45 chr2 23698420 23698687 -229557896 + MLT1A1 LTR MaLR 1 301 -64 2284 112 16 0 chr2 23698687 23698992 -229557591 - AluSx SINE Alu -2 310 1 1315 176 9 45 chr2 23698992 23699055 -229557528 + MLT1A1 LTR MaLR 301 365 0 204 370 0 0 chr2 23699715 23699796 -229556787 - L2 LINE L2 -1 3271 3191 243 203 0 0 chr2 23699900 23699964 -229556619 + A-rich Low_complexity Low_complexity 1 64 0 401 200 0 0 chr2 23700032 23700107 -229556476 - MER45C DNA AcHobo 0 953 879 365 279 19 0 chr2 23700143 23700247 -229556336 - LTR16B LTR ERVL -196 268 163 299 274 14 0 chr2 23700249 23700322 -229556261 - MER45C DNA AcHobo -190 763 690 263 219 62 0 chr2 23700424 23700488 -229556095 - MER45C DNA AcHobo -775 178 111 267 178 0 0 chr2 23700489 23700534 -229556049 + Alu SINE Alu 1 45 -257 446 326 103 49 chr2 23700564 23701352 -229555231 - L2 LINE L2 -211 3061 2220 1371 162 64 24 chr2 23701363 23701659 -229554924 + MLT1C LTR MaLR 1 308 -159 696 245 172 45 chr2 23702650 23703046 -229553537 + MLT1J2 LTR MaLR 5 450 0 2422 81 7 0 chr2 23703921 23704228 -229552355 + AluY SINE Alu 1 309 -2 2317 106 0 6 chr2 23704792 23705103 -229551480 + AluSg SINE Alu 1 309 -1 499 288 23 23 chr2 23705529 23705706 -229550877 + MLT1L LTR MaLR 112 288 -327 331 258 97 32 chr2 23705788 23705943 -229550640 + MLT1L LTR MaLR 445 609 -6 2123 118 14 0 chr2 23706440 23706727 -229549856 + AluSx SINE Alu 1 291 -21 780 290 9 0 chr2 23706738 23706959 -229549624 - MIR SINE MIR 0 262 40 2407 55 0 0 chr2 23707223 23707514 -229549069 + L1P LINE L1 4515 4805 -1341 244 196 0 20 chr2 23707514 23707565 -229549018 + MLT1G1 LTR MaLR 546 595 0 459 0 0 0 chr2 23708840 23708891 -229547692 + (CA)n Simple_repeat Simple_repeat 2 52 0 240 163 0 0 chr2 23709253 23709296 -229547287 + GA-rich Low_complexity Low_complexity 2 44 0 2741 36 0 0 chr2 23710827 23711133 -229545450 - AluY SINE Alu -5 306 1 1683 188 3 20 chr2 23711242 23711540 -229545043 - AluJo SINE Alu -18 294 2 360 246 148 48 chr2 23712400 23712757 -229543826 + L2 LINE L2 2921 3313 0 310 127 67 149 chr2 23713144 23713249 -229543334 + L1ME4a LINE L1 5999 6092 -29 2595 32 0 32 chr2 23713249 23713561 -229543022 - AluY SINE Alu -9 302 1 310 127 67 149 chr2 23713561 23713589 -229542994 + L1ME4a LINE L1 6092 6121 0 331 279 23 0 chr2 23714293 23714379 -229542204 + MIR3 SINE MIR 87 174 -34 204 342 33 8 chr2 23714434 23714554 -229542029 - L2 LINE L2 -158 3114 2992 665 277 21 16 chr2 23714873 23715061 -229541522 + MER5A DNA MER1_type 1 189 0 461 276 109 6 chr2 23715083 23715257 -229541326 + MIR SINE MIR 32 223 -39 25 31 0 0 chr2 23715260 23715292 -229541291 + AT_rich Low_complexity Low_complexity 1 32 0 2386 106 0 3 chr2 23715389 23715701 -229540882 - AluSx SINE Alu -1 311 1 211 394 0 10 chr2 23716110 23716214 -229540369 - MIR SINE MIR -57 151 49 193 362 71 35 chr2 23718448 23718702 -229537881 + L3 LINE CR1 1068 1330 -247 269 225 50 25 chr2 23721182 23721262 -229535321 + MIR SINE MIR 178 259 -3 285 272 141 0 chr2 23721621 23721713 -229534870 + MER5C DNA MER1_type 3 107 -217 2392 107 0 0 chr2 23721722 23722032 -229534551 + AluSg SINE Alu 1 310 0 243 206 0 48 chr2 23722192 23722255 -229534328 + MER5C DNA MER1_type 251 310 -14 4332 155 31 11 chr2 23724016 23724818 -229531765 + L1MB3 LINE L1 5284 6101 -82 599 140 0 0 chr2 23725577 23725677 -229530906 + L1MB3 LINE L1 6083 6182 -1 22 0 0 0 chr2 23725819 23725841 -229530742 + AT_rich Low_complexity Low_complexity 1 22 0 889 277 85 3 chr2 23725863 23726228 -229530355 - L1ME2 LINE L1 -26 6138 5744 1353 197 24 41 chr2 23726804 23727094 -229529489 + AluJo SINE Alu 1 285 -27 315 193 29 14 chr2 23729102 23729242 -229527341 + (TA)n Simple_repeat Simple_repeat 1 142 0 351 0 0 0 chr2 23729982 23730021 -229526562 + (TG)n Simple_repeat Simple_repeat 1 39 0 301 263 27 45 chr2 23731198 23731391 -229525192 - L2 LINE L2 -1 3312 3091 271 260 0 14 chr2 23732080 23732153 -229524430 - L2 LINE L2 -208 3064 2993 2396 104 3 0 chr2 23732302 23732609 -229523974 + AluSx SINE Alu 1 308 -4 267 307 47 40 chr2 23732918 23733068 -229523515 + MIR SINE MIR 66 216 -46 312 190 300 20 chr2 23733108 23733208 -229523375 - L1ME4a LINE L1 -5 6116 5989 250 222 61 20 chr2 23733215 23733314 -229523269 - L1ME4a LINE L1 -179 5942 5840 1470 229 27 27 chr2 23733423 23733790 -229522793 - LTR40a LTR ERVL -152 367 1 818 255 61 9 chr2 23734818 23735030 -229521553 - MIR SINE MIR -6 256 34 181 229 133 60 chr2 23735110 23735193 -229521390 + L2 LINE L2 1395 1483 -1831 22 0 0 0 chr2 23735322 23735344 -229521239 + AT_rich Low_complexity Low_complexity 1 22 0 2161 100 21 7 chr2 23735346 23735637 -229520946 + AluSx SINE Alu 13 307 -5 210 154 0 0 chr2 23736935 23736974 -229519609 + A-rich Low_complexity Low_complexity 1 39 0 415 196 74 16 chr2 23737948 23738078 -229518505 - MLT1I LTR MaLR -3 536 286 185 313 16 16 chr2 23738495 23738559 -229518024 - L3 LINE CR1 -3 1574 1511 402 327 111 0 chr2 23738623 23738840 -229517743 - L3 LINE CR1 -273 1304 1064 823 318 92 16 chr2 23738930 23739376 -229517207 - L2 LINE L2 0 3313 2834 224 329 13 0 chr2 23739539 23739615 -229516968 - L3 LINE CR1 -737 840 764 1755 184 27 3 chr2 23740967 23741298 -229515285 - MER44D DNA MER2_type 0 609 1 1536 192 22 11 chr2 23741335 23741606 -229514977 + AluJb SINE Alu 20 293 -19 236 214 294 46 chr2 23742301 23742457 -229514126 - MIR SINE MIR -33 175 18 204 179 0 0 chr2 23744828 23744867 -229511716 + GA-rich Low_complexity Low_complexity 4 42 0 1863 151 46 27 chr2 23744985 23745050 -229511533 - L1MB8 LINE L1 -2 6176 6114 2283 109 3 0 chr2 23745050 23745353 -229511230 + AluSp SINE Alu 1 304 -9 1863 151 46 27 chr2 23745353 23745658 -229510925 - L1MB8 LINE L1 -64 6114 5799 597 112 0 0 chr2 23745674 23745763 -229510820 - AluSc SINE Alu -6 303 215 413 142 36 24 chr2 23745765 23745885 -229510698 - L1MB8 LINE L1 -399 5779 5659 1322 84 0 24 chr2 23745977 23746144 -229510439 - AluSc SINE Alu -77 232 70 1050 357 88 23 chr2 23746144 23747152 -229509431 - L2 LINE L2 -65 3248 2174 339 308 61 57 chr2 23747410 23747689 -229508894 - L2 LINE L2 -179 3134 2855 269 159 0 0 chr2 23747906 23747950 -229508633 + Alu SINE Alu 246 289 -13 23 33 0 0 chr2 23748120 23748150 -229508433 + AT_rich Low_complexity Low_complexity 1 30 0 2402 109 0 3 chr2 23748228 23748539 -229508044 + AluSg SINE Alu 1 310 0 189 121 0 0 chr2 23748573 23748606 -229507977 + (CAT)n Simple_repeat Simple_repeat 3 35 0 410 339 27 43 chr2 23750061 23750318 -229506265 + L1M4 LINE L1 3169 3421 -2725 2412 43 40 7 chr2 23750318 23750618 -229505965 + AluY SINE Alu 1 310 -1 887 160 0 0 chr2 23750670 23750801 -229505782 - FLAM_C SINE Alu -10 133 3 1099 271 136 14 chr2 23750827 23751328 -229505255 + L1ME3A LINE L1 5587 6148 -22 1953 131 7 0 chr2 23751361 23751687 -229504896 + AluSx SINE Alu 1 328 0 532 200 59 0 chr2 23752695 23752830 -229503753 + L1MB7 LINE L1 6042 6184 0 197 298 107 46 chr2 23753230 23753361 -229503222 + L2 LINE L2 3104 3242 -30 185 283 22 0 chr2 23753376 23753422 -229503161 + L2 LINE L2 3214 3260 -12 180 77 0 0 chr2 23753806 23753832 -229502751 + (CAGCC)n Simple_repeat Simple_repeat 3 28 0 466 289 100 28 chr2 23754483 23754663 -229501920 + MIR SINE MIR 1 193 -69 1964 194 94 26 chr2 23754684 23755152 -229501431 + MLT1D LTR MaLR 1 500 -5 1055 336 139 49 chr2 23755236 23756656 -229499927 - L3 LINE CR1 -28 1549 2 193 250 0 88 chr2 23756832 23756900 -229499683 + MER5A DNA MER1_type 30 91 -98 822 263 93 35 chr2 23756915 23757291 -229499292 - MLT1J1 LTR MaLR -2 444 47 244 121 152 0 chr2 23757307 23757371 -229499212 - MLT1J1 LTR MaLR -352 94 21 236 316 127 0 chr2 23757388 23757467 -229499116 - MER5A DNA MER1_type -100 89 1 438 303 83 78 chr2 23757545 23757931 -229498652 + L2 LINE L2 2864 3251 -21 453 223 39 0 chr2 23758399 23758502 -229498081 + MLT1F1 LTR MaLR 1 107 -435 1218 218 35 22 chr2 23758521 23758862 -229497721 + MLT1F1 LTR MaLR 224 567 0 33 80 0 0 chr2 23759074 23759149 -229497434 + AT_rich Low_complexity Low_complexity 1 75 0 1902 144 34 0 chr2 23759421 23759713 -229496870 + AluSx SINE Alu 2 303 -9 201 39 0 0 chr2 23761098 23761124 -229495459 + (G)n Simple_repeat Simple_repeat 1 26 0 2038 125 7 17 chr2 23761620 23761916 -229494667 + AluSx SINE Alu 1 293 -19 230 186 17 34 chr2 23762898 23762957 -229493626 + L2 LINE L2 3212 3269 -3 185 286 0 0 chr2 23763057 23763106 -229493477 + L2 LINE L2 3263 3311 -2 525 249 157 40 chr2 23763526 23763741 -229492842 + MIR SINE MIR 10 251 -11 22 0 0 0 chr2 23765479 23765501 -229491082 + AT_rich Low_complexity Low_complexity 1 22 0 27 73 0 0 chr2 23766548 23766603 -229489980 + GC_rich Low_complexity Low_complexity 1 55 0 321 131 0 0 chr2 23768008 23768069 -229488514 + (TGGA)n Simple_repeat Simple_repeat 3 63 0 329 311 149 6 chr2 23768939 23769100 -229487483 - MIR3 SINE MIR -6 202 19 189 327 44 26 chr2 23769918 23770031 -229486552 + L2 LINE L2 3142 3256 -16 201 94 0 0 chr2 23771584 23771616 -229484967 + (TTCA)n Simple_repeat Simple_repeat 3 34 0 269 208 15 154 chr2 23772834 23772964 -229483619 + MER103 DNA DNA 3 114 -52 282 339 123 0 chr2 23773235 23773365 -229483218 + L2 LINE L2 3127 3272 0 1855 251 101 15 chr2 23774221 23774835 -229481748 + HsTC2a DNA Tc2 78 744 0 437 322 33 115 chr2 23778576 23779001 -229477582 + L2 LINE L2 2881 3270 -2 242 253 23 58 chr2 23779129 23779216 -229477367 + L2 LINE L2 3004 3087 -185 201 335 90 48 chr2 23779762 23779929 -229476654 + L2 LINE L2 3083 3256 -16 204 158 0 0 chr2 23779967 23780005 -229476578 + A-rich Low_complexity Low_complexity 3 40 0 2260 140 60 3 chr2 23781213 23781577 -229475006 - MLT1B LTR MaLR 0 390 6 225 303 99 46 chr2 23781939 23782091 -229474492 + MIR SINE MIR 95 254 -8 417 330 115 10 chr2 23782628 23782837 -229473746 - MIR SINE MIR -1 261 31 872 258 99 40 chr2 23782926 23783228 -229473355 + L1ME3 LINE L1 5795 6114 -48 205 379 66 71 chr2 23785168 23785606 -229470977 - L2 LINE L2 0 3272 2837 408 167 18 53 chr2 23786114 23786228 -229470355 + Charlie7 DNA MER1_type 28 137 -2475 227 277 174 40 chr2 23786351 23786575 -229470008 + L1MEc LINE L1 1454 1707 -4689 431 259 28 52 chr2 23787095 23787307 -229469276 + L1MEc LINE L1 2525 2731 -3484 2157 115 86 9 chr2 23787419 23787757 -229468826 - THE1B LTR MaLR 0 364 1 215 325 113 25 chr2 23788160 23788240 -229468343 + L2 LINE L2 3169 3255 -17 2056 175 16 10 chr2 23789728 23790116 -229466467 + MLT1B LTR MaLR 1 390 0 201 229 148 0 chr2 23790879 23790940 -229465643 - MIR SINE MIR -24 238 169 837 271 48 31 chr2 23790949 23791148 -229465435 + L1ME3A LINE L1 5418 5625 -545 2687 80 16 16 chr2 23791148 23791523 -229465060 - THE1C LTR MaLR 0 375 1 837 271 48 31 chr2 23791523 23791615 -229464968 + L1ME3A LINE L1 5625 5714 -456 1228 217 41 52 chr2 23791637 23792001 -229464582 + L1ME3A LINE L1 5811 6170 0 247 329 200 0 chr2 23792005 23792145 -229464438 - MIR SINE MIR -89 173 6 193 309 181 0 chr2 23792879 23792973 -229463610 + MIR SINE MIR 152 262 0 485 240 147 69 chr2 23794487 23794833 -229461750 - HAL1 LINE L1 -2 2505 2133 391 304 60 71 chr2 23794911 23795279 -229461304 - HAL1 LINE L1 -2125 382 19 685 265 49 7 chr2 23795612 23795897 -229460686 + HERVL LTR ERVL 1711 1853 -3143 450 343 26 46 chr2 23795889 23796088 -229460495 + HERVL LTR ERVL 3173 3374 -2280 * 2147 93 3 0 chr2 23796088 23796378 -229460205 + AluSc SINE Alu 1 291 -18 450 343 26 46 chr2 23796378 23796639 -229459944 + HERVL LTR ERVL 3374 3624 -2030 457 299 182 23 chr2 23797564 23797949 -229458634 + MLT1J2 LTR MaLR 5 450 0 573 281 155 47 chr2 23799879 23800311 -229456272 + MLT1J2 LTR MaLR 1 450 0 1299 223 81 17 chr2 23801142 23801488 -229455095 + MER110A LTR ERV1 69 436 -32 282 178 0 0 chr2 23801487 23801532 -229455051 + MLT1A2 LTR MaLR 5 49 -325 * 201 350 69 17 chr2 23802766 23803057 -229453526 - L2 LINE L2 -1020 2294 1989 182 278 74 0 chr2 23805207 23805261 -229451322 + L2 LINE L2 3209 3266 -6 224 353 30 0 chr2 23805319 23805452 -229451131 + L2 LINE L2 2637 2773 -541 710 262 21 5 chr2 23805872 23806063 -229450520 + MIR SINE MIR 29 222 -40 668 204 0 30 chr2 23806102 23806234 -229450349 + AluJb SINE Alu 165 292 -20 234 0 0 0 chr2 23806243 23806269 -229450314 + (GAAA)n Simple_repeat Simple_repeat 4 29 0 402 115 0 0 chr2 23806288 23806349 -229450234 + (GGAA)n Simple_repeat Simple_repeat 3 63 0 858 83 0 0 chr2 23806451 23806571 -229450012 + (GGAA)n Simple_repeat Simple_repeat 4 123 0 242 357 51 0 chr2 23806577 23806675 -229449908 - MIR SINE MIR -71 137 35 2072 134 0 3 chr2 23807995 23808308 -229448275 + AluSx SINE Alu 1 312 0 284 218 0 103 chr2 23812260 23812347 -229444236 + L2 LINE L2 3193 3270 -2 473 239 92 37 chr2 23812400 23812563 -229444020 - MLT1J2 LTR MaLR 0 450 279 198 0 0 0 chr2 23813330 23813352 -229443231 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 236 279 29 0 chr2 23813992 23814060 -229442523 - L1ME LINE L1 -437 5684 5615 238 226 75 19 chr2 23814110 23814216 -229442367 - L1ME LINE L1 -682 5482 5371 545 338 86 31 chr2 23814223 23814679 -229441904 - L1ME LINE L1 -813 5333 4853 703 99 54 9 chr2 23814693 23814826 -229441757 - AluSp/q SINE Alu 0 313 174 633 284 61 124 chr2 23814856 23815445 -229441138 - L1ME LINE L1 -1316 4830 4279 555 330 133 39 chr2 23816431 23817392 -229439191 - L2 LINE L2 0 3272 2215 306 202 83 60 chr2 23817838 23817922 -229438661 - L2 LINE L2 -2 3270 3185 414 0 0 0 chr2 23818168 23818214 -229438369 + (TG)n Simple_repeat Simple_repeat 1 46 0 502 266 90 17 chr2 23820845 23821022 -229435561 + L3b LINE CR1 1152 1341 -242 848 228 35 5 chr2 23821652 23821854 -229434729 - LTR67 LTR ERVL -2 555 348 258 315 14 0 chr2 23822328 23822401 -229434182 + MIR SINE MIR 20 93 -169 1079 186 0 16 chr2 23822488 23822676 -229433907 - AluJb SINE Alu -13 299 115 183 244 0 24 chr2 23823187 23823228 -229433355 + MIR SINE MIR 112 151 -111 * 268 187 40 80 chr2 23823214 23823289 -229433294 - MIR SINE MIR -95 113 42 305 321 108 35 chr2 23823625 23824058 -229432525 + L2 LINE L2 2227 2691 -623 390 379 11 6 chr2 23824283 23824457 -229432126 - MIR SINE MIR -75 187 13 578 247 100 24 chr2 23824730 23824900 -229431683 + L2 LINE L2 3090 3272 0 389 293 110 30 chr2 23825493 23825657 -229430926 + MIR SINE MIR 79 255 -7 191 300 25 12 chr2 23826678 23826758 -229429825 + MIR SINE MIR 59 139 -69 393 281 22 43 chr2 23827763 23827902 -229428681 - MIR SINE MIR -35 227 92 591 173 11 6 chr2 23828313 23828492 -229428091 + (TG)n Simple_repeat Simple_repeat 1 180 0 332 215 9 0 chr2 23828505 23828612 -229427971 + (TG)n Simple_repeat Simple_repeat 2 109 0 250 229 5 5 chr2 23828638 23828865 -229427718 + (TG)n Simple_repeat Simple_repeat 1 227 0 447 196 11 6 chr2 23828879 23829058 -229427525 + (TG)n Simple_repeat Simple_repeat 1 180 0 388 195 29 0 chr2 23829123 23829297 -229427286 + (TG)n Simple_repeat Simple_repeat 2 180 0 422 193 23 0 chr2 23829309 23829480 -229427103 + (TG)n Simple_repeat Simple_repeat 2 176 0 299 132 15 0 chr2 23829525 23829593 -229426990 + (TG)n Simple_repeat Simple_repeat 1 69 0 17407 28 1 1 chr2 23831191 23833363 -229423220 - L1P LINE L1 -1658 4488 2315 7671 30 0 0 chr2 23833363 23834722 -229421861 + L1PA3 LINE L1 4811 6169 0 1150 225 103 48 chr2 23834740 23835139 -229421444 - MLT1G1 LTR MaLR -37 558 95 2516 185 18 35 chr2 23835139 23835311 -229421272 + MLT1D LTR MaLR 1 174 -331 1623 168 34 30 chr2 23835311 23835608 -229420975 - AluJb SINE Alu -14 298 1 2516 185 18 35 chr2 23835608 23835949 -229420634 + MLT1D LTR MaLR 174 505 0 1150 225 103 48 chr2 23835949 23836025 -229420558 - MLT1G1 LTR MaLR -500 95 25 1404 272 56 82 chr2 23836284 23837248 -229419335 - L1MC4 LINE L1 0 8042 7104 2270 277 129 42 chr2 23837256 23837550 -229419033 - L1MC4a LINE L1 -975 6833 6566 2141 100 24 7 chr2 23837550 23837840 -229418743 - AluSq SINE Alu -17 296 2 2270 277 129 42 chr2 23837840 23838180 -229418403 - L1MC4a LINE L1 -1242 6566 6257 1116 156 40 10 chr2 23838180 23838379 -229418204 - MER6B DNA MER2_type -1 209 5 2270 277 129 42 chr2 23838379 23839195 -229417388 - L1MC4a LINE L1 -1551 6257 5255 434 318 118 47 chr2 23839201 23839582 -229417001 - L1MC4a LINE L1 -944 5202 4795 884 221 99 1 chr2 23840893 23841175 -229415408 + MER46C DNA MER2_type 2 338 0 490 287 45 6 chr2 23841482 23841639 -229414944 - MIR SINE MIR 0 262 100 228 254 94 14 chr2 23841664 23841802 -229414781 - LTR67 LTR ERVL -29 528 380 204 309 75 21 chr2 23842226 23842320 -229414263 - MIR SINE MIR -87 121 23 638 269 138 24 chr2 23842557 23842847 -229413736 - MLT1H LTR MaLR -16 533 211 1331 156 3 122 chr2 23843944 23844316 -229412267 - L1MB8 LINE L1 -6 6172 5844 600 240 73 82 chr2 23844319 23844552 -229412031 + MIR SINE MIR 31 261 -1 1276 135 50 0 chr2 23845000 23845222 -229411361 - MSTB LTR MaLR 0 426 194 1384 220 3 33 chr2 23845225 23845529 -229411054 - AluJo SINE Alu -12 300 6 998 138 46 0 chr2 23845537 23845711 -229410872 - MSTB LTR MaLR -244 182 1 221 373 15 0 chr2 23846228 23846295 -229410288 + L2 LINE L2 3123 3190 -82 23 54 0 0 chr2 23846318 23846355 -229410228 + AT_rich Low_complexity Low_complexity 1 37 0 233 340 47 19 chr2 23848019 23848125 -229408458 - L2 LINE L2 -5 3308 3200 1073 80 0 0 chr2 23848818 23848955 -229407628 - AluSg/x SINE Alu -6 306 170 2004 151 84 35 chr2 23849008 23849379 -229407204 + MLT1B LTR MaLR 2 390 0 2609 68 0 0 chr2 23850941 23851250 -229405333 + AluY SINE Alu 1 309 -2 1262 291 148 55 chr2 23851429 23851496 -229405087 - L2 LINE L2 -2 3311 3252 889 195 133 0 chr2 23851496 23851691 -229404892 - MER58A DNA MER1_type -3 221 1 1262 291 148 55 chr2 23851691 23852822 -229403761 - L2 LINE L2 -61 3252 1990 662 239 116 61 chr2 23852966 23853259 -229403324 - L2 LINE L2 -1324 1990 1682 336 336 35 17 chr2 23853402 23853518 -229403065 - L2 LINE L2 -1 3271 3154 807 149 29 120 chr2 23853529 23853737 -229402846 + MER20 DNA MER1_type 1 189 -30 234 337 102 10 chr2 23854177 23854275 -229402308 - L2 LINE L2 -528 2786 2680 768 306 37 0 chr2 23854287 23854503 -229402080 - MIR SINE MIR 0 262 39 488 71 12 60 chr2 23855151 23855235 -229401348 + MADE1 DNA Mariner 1 80 0 352 161 12 49 chr2 23855744 23855825 -229400758 + MIR3 SINE MIR 111 188 -20 1008 129 0 0 chr2 23856064 23856204 -229400379 + FLAM_C SINE Alu 3 142 -1 695 252 110 13 chr2 23857504 23857822 -229398761 + LTR16C LTR ERVL 120 468 -23 871 279 68 6 chr2 23858610 23858932 -229397651 + LTR16C LTR ERVL 150 491 0 345 280 40 16 chr2 23860150 23860275 -229396308 + MIR3 SINE MIR 10 137 -71 409 319 49 58 chr2 23861263 23861489 -229395094 - MIR SINE MIR -30 232 9 194 148 0 0 chr2 23862946 23862973 -229393610 - L2 LINE L2 -20 3252 3226 463 313 20 22 chr2 23863565 23863763 -229392820 + MIR SINE MIR 3 198 -62 2061 97 0 4 chr2 23865585 23865868 -229390715 + AluSc SINE Alu 23 304 0 578 138 0 0 chr2 23865869 23865978 -229390605 - L1PA12 LINE L1 -4449 3135 3019 328 320 39 10 chr2 23865980 23866083 -229390500 - MIR SINE MIR -141 121 16 755 244 107 90 chr2 23866094 23866606 -229389977 - LTR33 LTR ERVL 0 521 1 1184 231 126 38 chr2 23866969 23867471 -229389112 + L2 LINE L2 2780 3301 -12 189 0 0 0 chr2 23867472 23867493 -229389090 + (TGAA)n Simple_repeat Simple_repeat 3 23 0 27 29 0 0 chr2 23868202 23868236 -229388347 + AT_rich Low_complexity Low_complexity 1 34 0 201 74 0 0 chr2 23868693 23868720 -229387863 + (A)n Simple_repeat Simple_repeat 1 27 0 1552 163 20 0 chr2 23869128 23869380 -229387203 - AluSx SINE Alu -51 261 5 473 327 125 9 chr2 23869540 23869965 -229386618 - L1ME4a LINE L1 -11 6110 5637 191 324 39 56 chr2 23872785 23872964 -229383619 + L2 LINE L2 2232 2407 -907 339 208 160 24 chr2 23873165 23873290 -229383293 + MIR3 SINE MIR 4 145 -63 186 246 154 108 chr2 23873358 23873416 -229383167 + MER5B DNA MER1_type 1 55 -123 2208 113 0 10 chr2 23873416 23873718 -229382865 + AluSx SINE Alu 3 301 -11 186 246 154 108 chr2 23873718 23873789 -229382794 + MER5B DNA MER1_type 55 136 -42 720 224 16 44 chr2 23874253 23874436 -229382147 + MER5B DNA MER1_type 1 178 0 1905 128 45 3 chr2 23874843 23875133 -229381450 + AluSx SINE Alu 1 302 -10 201 279 0 0 chr2 23875686 23875729 -229380854 + MER91 DNA MER1_type 122 164 -26 426 39 0 0 chr2 23876032 23876084 -229380499 + (TTCA)n Simple_repeat Simple_repeat 4 55 0 226 267 89 11 chr2 23876107 23876197 -229380386 - L2 LINE L2 -47 3225 3129 369 280 72 16 chr2 23876287 23876412 -229380171 - L2 LINE L2 0 3313 3182 456 276 14 60 chr2 23876898 23877047 -229379536 - MIR SINE MIR -60 148 32 259 237 175 26 chr2 23878440 23878554 -229378029 + L2 LINE L2 3142 3272 0 839 241 63 5 chr2 23878907 23879114 -229377469 + MIR SINE MIR 13 231 -31 311 313 0 30 chr2 23879573 23879704 -229376879 + MIR3 SINE MIR 60 186 -22 558 341 45 5 chr2 23880103 23880323 -229376260 - MIR SINE MIR -19 243 15 193 175 25 0 chr2 23882003 23882043 -229374540 - MER5B DNA MER1_type 0 178 138 634 228 102 0 chr2 23882537 23882704 -229373879 - L3b LINE CR1 -117 1466 1283 1435 108 0 0 chr2 23884166 23884360 -229372223 - L1PA8 LINE L1 -4 6168 5975 362 275 44 93 chr2 23886106 23886288 -229370295 + MIR3 SINE MIR 18 190 -18 456 175 0 0 chr2 23886842 23886939 -229369644 + (TG)n Simple_repeat Simple_repeat 1 97 0 583 237 0 30 chr2 23888261 23888396 -229368187 - FLAM_C SINE Alu -1 132 2 766 201 35 0 chr2 23891190 23891364 -229365219 - L1MA9 LINE L1 -47 6265 6086 643 204 162 0 chr2 23891859 23892026 -229364557 + MER3 DNA MER1_type 15 208 -1 248 222 19 0 chr2 23891985 23892039 -229364544 - MER3 DNA MER1_type -119 90 36 * 242 302 104 0 chr2 23893232 23893328 -229363255 - L2 LINE L2 -15 3298 3193 695 250 17 56 chr2 23894949 23895181 -229361402 - L1ME2 LINE L1 -16 6148 5926 463 253 55 7 chr2 23896451 23896597 -229359986 + MIR3 SINE MIR 56 208 0 29 28 0 0 chr2 23897415 23897451 -229359132 + AT_rich Low_complexity Low_complexity 1 36 0 459 254 56 7 chr2 23900953 23901095 -229355488 + MIR3 SINE MIR 60 208 0 880 229 147 7 chr2 23901373 23901814 -229354769 - MLT1G LTR MaLR 0 530 32 786 214 46 25 chr2 23902083 23902279 -229354304 + MIR SINE MIR 21 220 -42 838 154 0 14 chr2 23904190 23904333 -229352250 - MLT1B LTR MaLR 0 390 250 270 285 86 93 chr2 23904334 23904485 -229352098 + MER5A DNA MER1_type 27 176 -13 588 250 45 60 chr2 23905286 23905373 -229351210 + MIR SINE MIR 64 151 -111 2185 104 3 0 chr2 23905373 23905670 -229350913 + AluSp SINE Alu 1 298 -15 588 250 45 60 chr2 23905670 23905782 -229350801 + MIR SINE MIR 151 260 -2 249 323 38 8 chr2 23908129 23908262 -229348321 + L2 LINE L2 2369 2505 -809 197 277 46 0 chr2 23908235 23908300 -229348283 + L2 LINE L2 3205 3272 0 * 373 278 145 61 chr2 23908492 23908884 -229347699 + L2 LINE L2 2830 3254 -18 2189 86 0 10 chr2 23910472 23910773 -229345810 + AluSc SINE Alu 1 298 -11 297 257 48 38 chr2 23911148 23911253 -229345330 + MIR SINE MIR 92 197 -65 1758 120 16 72 chr2 23912780 23913148 -229343435 - MER4A LTR ERV1 0 664 259 444 165 87 9 chr2 23913161 23913276 -229343307 - MER4A LTR ERV1 -539 125 2 262 325 127 25 chr2 23914829 23915026 -229341557 - MIR SINE MIR -36 226 10 2133 114 3 7 chr2 23915361 23915659 -229340924 - AluSx SINE Alu -15 297 1 259 254 0 15 chr2 23916869 23916936 -229339647 - L2 LINE L2 -2 3311 3246 235 340 61 36 chr2 23917289 23917461 -229339122 - MIR SINE MIR -63 145 16 812 193 18 94 chr2 23919919 23920142 -229336441 - MER63A DNA MER1_type -4 206 1 213 286 39 0 chr2 23920925 23921002 -229335581 - MIR SINE MIR -61 147 68 1754 144 0 24 chr2 23922326 23922624 -229333959 - AluJo SINE Alu -21 291 1 236 284 70 0 chr2 23923281 23923375 -229333208 - MIR SINE MIR -61 147 53 218 314 0 97 chr2 23927466 23927590 -229328993 + MIR SINE MIR 150 261 -1 180 346 23 54 chr2 23927590 23927720 -229328863 + L2 LINE L2 2924 3049 -223 810 184 10 7 chr2 23928165 23928331 -229328252 + L1ME2 LINE L1 6012 6183 -1 2989 132 18 25 chr2 23928635 23929150 -229327433 + L1MB3 LINE L1 5673 6183 0 261 0 0 0 chr2 23930100 23930129 -229326454 + (CA)n Simple_repeat Simple_repeat 1 29 0 342 80 0 0 chr2 23930129 23930179 -229326404 + (TC)n Simple_repeat Simple_repeat 1 50 0 465 50 0 0 chr2 23930627 23930687 -229325896 + (CA)n Simple_repeat Simple_repeat 2 61 0 336 351 60 12 chr2 23931238 23931406 -229325177 - MIR3 SINE MIR -15 193 18 299 161 145 0 chr2 23931453 23931515 -229325068 - MER5A DNA MER1_type -115 74 4 1951 149 3 3 chr2 23932642 23932951 -229323632 - AluJb SINE Alu -3 309 1 926 183 76 15 chr2 23933458 23933655 -229322928 - MER3 DNA MER1_type 0 209 1 885 276 141 42 chr2 23933812 23934309 -229322274 - MLT1K LTR MaLR -10 578 33 321 172 0 0 chr2 23934447 23934511 -229322072 + (TGGA)n Simple_repeat Simple_repeat 1 64 0 329 294 18 55 chr2 23936093 23936161 -229320422 + MIR SINE MIR 81 150 -112 408 237 168 67 chr2 23936161 23936566 -229320017 - MLT1J1 LTR MaLR 0 446 1 329 294 18 55 chr2 23936566 23936660 -229319923 + MIR SINE MIR 150 237 -25 215 309 62 0 chr2 23937441 23937522 -229319061 - L2 LINE L2 -5 3308 3223 781 235 11 16 chr2 23937533 23937716 -229318867 + MIR SINE MIR 12 193 -69 1062 256 97 4 chr2 23937731 23938338 -229318245 - L2 LINE L2 -97 3216 2546 299 326 39 8 chr2 23938451 23938580 -229318003 + MIR3 SINE MIR 15 147 -61 340 317 149 6 chr2 23940620 23940781 -229315802 + MIR SINE MIR 69 252 -10 242 229 0 0 chr2 23940789 23940837 -229315746 + (TAG)n Simple_repeat Simple_repeat 3 50 0 191 205 0 0 chr2 23941080 23941119 -229315464 - L2 LINE L2 -207 3065 3027 639 169 0 0 chr2 23941462 23941610 -229314973 + (CA)n Simple_repeat Simple_repeat 2 149 0 1005 263 104 61 chr2 23941626 23942002 -229314581 + MLT1I LTR MaLR 18 409 0 31 0 0 0 chr2 23942670 23942701 -229313882 + AT_rich Low_complexity Low_complexity 1 31 0 220 224 282 12 chr2 23944996 23945081 -229311502 + MER5A DNA MER1_type 55 162 -27 * 527 194 0 0 chr2 23945010 23945114 -229311469 - MER5A DNA MER1_type -80 109 6 408 304 0 48 chr2 23945254 23945422 -229311161 - L1MB1 LINE L1 -25 6164 6005 696 206 0 86 chr2 23945424 23945633 -229310950 + L1MA10 LINE L1 6144 6334 0 2278 98 3 0 chr2 23945962 23946269 -229310314 - AluSx SINE Alu -4 308 1 328 223 252 0 chr2 23946804 23946943 -229309640 - MER96 DNA MER1_type? -1 174 1 1893 133 3 47 chr2 23949566 23949883 -229306700 + AluSx SINE Alu 1 303 -9 330 256 0 0 chr2 23951057 23951135 -229305448 - MLT1I LTR MaLR -3 406 329 456 275 85 56 chr2 23951193 23951429 -229305154 - MLT1J2 LTR MaLR -170 239 1 2008 117 23 7 chr2 23951612 23951911 -229304672 - AluSx SINE Alu -6 306 3 306 298 48 0 chr2 23952065 23952169 -229304414 - L2 LINE L2 0 3313 3205 186 43 0 0 chr2 23952642 23952665 -229303918 + (CAGG)n Simple_repeat Simple_repeat 3 25 0 745 329 110 23 chr2 23952793 23953410 -229303173 - L2 LINE L2 -882 2432 1762 2155 125 0 0 chr2 23953473 23953778 -229302805 - AluSc SINE Alu -4 305 1 317 273 182 23 chr2 23955122 23955254 -229301329 + MIR SINE MIR 45 197 -65 373 302 0 9 chr2 23956149 23956255 -229300328 - MIR SINE MIR -57 205 101 246 231 0 0 chr2 23956677 23956742 -229299841 + (TG)n Simple_repeat Simple_repeat 2 66 0 788 234 49 35 chr2 23958102 23958328 -229298255 + MIR SINE MIR 7 235 -27 926 119 0 8 chr2 23958439 23958573 -229298010 - AluSq/x SINE Alu -180 133 1 335 311 66 0 chr2 23959503 23959654 -229296929 - MIR3 SINE MIR -23 185 25 701 271 89 22 chr2 23959838 23960063 -229296520 + MIR SINE MIR 17 256 -6 1258 266 85 31 chr2 23961476 23961992 -229294591 - MLT1H LTR MaLR 0 549 6 903 289 147 16 chr2 23964573 23965057 -229291526 + MLT1L LTR MaLR 1 547 -68 262 320 47 29 chr2 23965395 23965567 -229291016 + L2 LINE L2 2863 3037 -235 26 30 0 0 chr2 23965775 23965808 -229290775 + AT_rich Low_complexity Low_complexity 1 33 0 2345 48 41 0 chr2 23965906 23966197 -229290386 - AluY SINE Alu -8 303 1 482 257 125 0 chr2 23966503 23966655 -229289928 - MIR SINE MIR -12 250 80 340 314 51 29 chr2 23967492 23967667 -229288916 + MIR SINE MIR 13 191 -71 1127 196 31 9 chr2 23967708 23967937 -229288646 + L1MB4 LINE L1 5947 6180 0 347 298 139 6 chr2 23968691 23968849 -229287734 - MIR SINE MIR -4 258 80 2175 117 0 0 chr2 23969232 23969539 -229287044 + AluSx SINE Alu 1 307 -5 1969 106 7 3 chr2 23970383 23970665 -229285918 + AluSx SINE Alu 7 289 -23 2204 113 0 3 chr2 23970674 23970983 -229285600 + AluSq SINE Alu 1 308 -5 934 239 20 20 chr2 23971500 23971747 -229284836 + MIR SINE MIR 16 262 0 231 281 123 18 chr2 23971784 23971898 -229284685 + L2 LINE L2 3180 3305 -8 523 313 39 30 chr2 23972315 23972545 -229284038 - MIR SINE MIR -14 248 17 413 341 78 27 chr2 23972502 23972910 -229283673 + L2 LINE L2 2246 2674 -640 * 327 282 11 83 chr2 23973195 23973298 -229283285 + MIR SINE MIR 94 203 -59 2334 61 0 7 chr2 23973298 23973591 -229282992 + AluY SINE Alu 1 291 -20 327 282 11 83 chr2 23973591 23973603 -229282980 + MIR SINE MIR 203 214 -48 2114 100 0 7 chr2 23973603 23973894 -229282689 + AluSc SINE Alu 1 289 -20 327 282 11 83 chr2 23973894 23973906 -229282677 + MIR SINE MIR 214 225 -37 2103 114 0 3 chr2 23973906 23974204 -229282379 + AluSc SINE Alu 1 297 -12 327 282 11 83 chr2 23974204 23974255 -229282328 + MIR SINE MIR 225 261 -1 2312 86 0 7 chr2 23974753 23975056 -229281527 + AluSq SINE Alu 1 301 -12 1282 222 109 52 chr2 23976016 23976457 -229280126 + MLT1C LTR MaLR 1 466 -1 2115 129 3 0 chr2 23977934 23978245 -229278338 - AluSx SINE Alu 0 312 1 927 194 0 17 chr2 23979380 23979560 -229277023 - L1MB5 LINE L1 -6 6168 5992 2243 77 30 3 chr2 23979572 23979870 -229276713 - AluSq SINE Alu -7 306 1 186 338 27 0 chr2 23980077 23980151 -229276432 + L2 LINE L2 3186 3261 -11 262 252 30 99 chr2 23981807 23981938 -229274645 + MER5A DNA MER1_type 60 181 -8 278 122 0 0 chr2 23983082 23983123 -229273460 + MER91 DNA MER1_type 4 44 -146 319 289 58 8 chr2 23983269 23983390 -229273193 - MIR3 SINE MIR -53 155 29 417 292 128 60 chr2 23984051 23984466 -229272117 - L2 LINE L2 0 3313 2871 217 234 0 0 chr2 23985226 23985273 -229271310 + L2 LINE L2 3226 3272 0 251 276 0 69 chr2 23987196 23987283 -229269300 + MIR SINE MIR 111 191 -71 356 252 35 49 chr2 23988478 23988621 -229267962 - MIR SINE MIR -55 207 67 333 0 0 0 chr2 23990519 23990556 -229266027 + (TG)n Simple_repeat Simple_repeat 2 38 0 322 219 31 0 chr2 23990556 23990620 -229265963 + L1MC4 LINE L1 6640 6705 -1337 2334 102 0 3 chr2 23990621 23990934 -229265649 - AluSx SINE Alu 0 312 1 204 219 234 0 chr2 23990936 23991000 -229265583 + MIR3 SINE MIR 124 202 -6 390 264 155 13 chr2 23991354 23991509 -229265074 - MIR SINE MIR 0 262 86 212 289 48 29 chr2 23992441 23992545 -229264038 + MIR SINE MIR 89 194 -68 279 290 23 11 chr2 23992684 23992860 -229263723 + (TA)n Simple_repeat Simple_repeat 2 179 0 673 293 85 29 chr2 23994116 23994362 -229262221 - MIR SINE MIR 0 262 3 881 149 0 8 chr2 23995829 23995963 -229260620 - FLAM_C SINE Alu 0 133 1 1483 86 247 0 chr2 23997349 23997604 -229258979 - AluYb8 SINE Alu 0 318 1 1675 162 52 0 chr2 23998317 23998607 -229257976 - AluJb SINE Alu -7 305 1 2177 102 3 0 chr2 23998983 23999278 -229257305 - AluSx SINE Alu -16 296 1 273 57 0 0 chr2 23999349 23999384 -229257199 + (TG)n Simple_repeat Simple_repeat 1 35 0 461 84 14 0 chr2 23999384 23999455 -229257128 + (GA)n Simple_repeat Simple_repeat 2 73 0 1919 171 50 28 chr2 24000029 24000386 -229256197 - MLT1A1 LTR MaLR 0 365 1 2102 131 30 24 chr2 24000769 24001104 -229255479 + MER1B DNA MER1_type 1 337 0 263 327 92 0 chr2 24001568 24001721 -229254862 + L2 LINE L2 3095 3261 -11 201 121 0 0 chr2 24002062 24002095 -229254488 + (TAA)n Simple_repeat Simple_repeat 1 33 0 304 326 12 0 chr2 24002315 24002401 -229254182 - L2 LINE L2 0 3313 3227 601 289 59 15 chr2 24002889 24003093 -229253490 - MIR SINE MIR 0 262 50 664 242 21 21 chr2 24004072 24004258 -229252325 - L2 LINE L2 0 3313 3128 758 290 102 37 chr2 24004684 24005672 -229250911 + L1MEd LINE L1 552 1475 -4835 1889 125 11 0 chr2 24005672 24005976 -229250607 + AluSx SINE Alu 1 307 0 758 290 102 37 chr2 24005976 24006660 -229249923 + L1MEd LINE L1 1475 2398 -3912 2493 65 0 0 chr2 24006693 24007000 -229249583 + AluSg SINE Alu 1 307 -3 1788 119 20 38 chr2 24007053 24007595 -229248988 + MER4A LTR ERV1 1 664 0 349 308 54 21 chr2 24007603 24007843 -229248740 + L1MEd LINE L1 2447 2694 -3435 340 244 225 34 chr2 24007843 24008052 -229248531 - L2 LINE L2 -176 3137 2889 224 193 123 0 chr2 24008397 24008454 -229248129 - MIR SINE MIR -78 184 121 282 353 73 18 chr2 24009799 24010017 -229246566 - MIR SINE MIR 0 262 33 1952 201 86 42 chr2 24011475 24011973 -229244610 + MLT2B1 LTR ERVL 1 520 0 234 271 96 131 chr2 24013035 24013326 -229243257 - L2 LINE L2 -16 3256 2976 198 0 0 0 chr2 24014386 24014408 -229242175 + (CAG)n Simple_repeat Simple_repeat 1 22 0 294 131 28 56 chr2 24014675 24014782 -229241801 + GA-rich Low_complexity Low_complexity 3 106 0 408 258 75 0 chr2 24015285 24015437 -229241146 - MIR SINE MIR -63 145 23 215 210 118 67 chr2 24015456 24015575 -229241008 + L2 LINE L2 2948 3072 -200 633 299 85 0 chr2 24015987 24016198 -229240385 - MIR SINE MIR -21 241 13 211 188 62 0 chr2 24016219 24016267 -229240316 - L2 LINE L2 -96 3176 3126 399 351 36 36 chr2 24018012 24018263 -229238320 - MIR SINE MIR -2 260 10 1562 194 41 36 chr2 24018916 24019232 -229237351 + MLT1A2 LTR MaLR 4 324 -50 2017 107 13 131 chr2 24019232 24019614 -229236969 - MER1B DNA MER1_type 0 337 1 1562 194 41 36 chr2 24019614 24019662 -229236921 + MLT1A2 LTR MaLR 324 370 -4 1992 106 3 20 chr2 24021118 24021419 -229235164 - AluSg SINE Alu -14 296 1 919 172 0 0 chr2 24021715 24021866 -229234717 + FRAM SINE Alu 1 151 -25 211 340 92 25 chr2 24023065 24023380 -229233203 - L2 LINE L2 -1152 2162 1827 274 242 111 40 chr2 24023646 24023687 -229232896 + MIR SINE MIR 42 79 -129 1972 145 0 13 chr2 24023687 24023997 -229232586 - AluSx SINE Alu -6 306 1 274 242 111 40 chr2 24023997 24024054 -229232529 + MIR SINE MIR 79 147 -61 491 319 11 27 chr2 24025159 24025347 -229231236 + MER5A DNA MER1_type 1 185 -4 384 287 67 27 chr2 24026014 24026164 -229230419 - LTR67 LTR ERVL -296 261 106 462 259 38 13 chr2 24026714 24026872 -229229711 - MLT1H1 LTR MaLR -42 513 352 324 0 0 0 chr2 24026966 24027002 -229229581 + (TG)n Simple_repeat Simple_repeat 2 37 0 207 0 0 0 chr2 24028066 24028089 -229228494 + (TTCA)n Simple_repeat Simple_repeat 4 26 0 316 219 47 0 chr2 24028317 24028381 -229228202 - MER91A DNA MER1_type -3 193 127 275 292 73 29 chr2 24029792 24029929 -229226654 + L2 LINE L2 3169 3311 -2 598 238 127 23 chr2 24031263 24031570 -229225013 - L1ME4a LINE L1 0 6121 5783 560 352 270 17 chr2 24032870 24033861 -229222722 - L3 LINE CR1 -123 1454 213 207 274 94 17 chr2 24033960 24034077 -229222506 - MIR SINE MIR -125 137 12 431 259 94 102 chr2 24034750 24034911 -229221672 - MIR SINE MIR -8 254 94 2272 110 0 0 chr2 24034911 24035212 -229221371 + AluSx SINE Alu 1 301 -11 431 259 94 102 chr2 24035212 24035305 -229221278 - MIR SINE MIR -168 94 2 472 252 49 14 chr2 24040012 24040155 -229216428 + MIR SINE MIR 78 225 -37 393 313 165 3 chr2 24040562 24040914 -229215669 + L2 LINE L2 2344 2752 -562 224 353 34 34 chr2 24041056 24041175 -229215408 + L2 LINE L2 3147 3265 -7 463 301 27 0 chr2 24041431 24041577 -229215006 + MIR SINE MIR 113 262 0 793 285 61 0 chr2 24042011 24042257 -229214326 + MIR SINE MIR 2 262 0 188 306 51 20 chr2 24043211 24043309 -229213274 + L2 LINE L2 2725 2825 -489 223 330 232 0 chr2 24044736 24044848 -229211735 - L3 LINE CR1 -438 1139 1002 1786 153 38 38 chr2 24044874 24045247 -229211336 - MLT1B LTR MaLR -17 373 1 769 319 153 25 chr2 24045553 24045985 -229210598 - L3 LINE CR1 -184 1393 907 295 198 52 21 chr2 24046353 24046450 -229210133 - MIR3 SINE MIR -10 198 98 2218 104 0 13 chr2 24047093 24047400 -229209183 + AluSx SINE Alu 1 303 -9 225 330 184 19 chr2 24047918 24048124 -229208459 - MIR SINE MIR -19 243 4 192 179 0 0 chr2 24048290 24048329 -229208254 + (TGGA)n Simple_repeat Simple_repeat 2 40 0 180 0 0 0 chr2 24050142 24050162 -229206421 + (A)n Simple_repeat Simple_repeat 1 20 0 303 272 16 24 chr2 24051255 24051372 -229205211 + C-rich Low_complexity Low_complexity 1 116 0 238 279 0 0 chr2 24052203 24052264 -229204319 + L2 LINE L2 3101 3161 -111 661 298 28 6 chr2 24052280 24052461 -229204122 - MER91B DNA MER1_type -5 185 1 665 277 43 30 chr2 24052465 24052696 -229203887 - MIR SINE MIR -13 249 16 203 329 24 12 chr2 24053088 24053170 -229203413 + L2 LINE L2 2685 2767 -547 2218 117 0 16 chr2 24053953 24054269 -229202314 + AluSq SINE Alu 1 311 -2 1831 179 0 3 chr2 24054269 24054576 -229202007 + AluJo SINE Alu 1 307 -5 287 219 323 0 chr2 24055120 24055216 -229201367 + L2 LINE L2 3187 3313 0 509 247 105 0 chr2 24056091 24056258 -229200325 + MIR SINE MIR 16 197 -61 2288 178 52 0 chr2 24058731 24059136 -229197447 - MSTB LTR MaLR 0 426 1 195 204 0 23 chr2 24059353 24059397 -229197186 - L2 LINE L2 -80 3233 3191 329 247 67 11 chr2 24060573 24060662 -229195921 + MER5B DNA MER1_type 85 178 0 258 307 99 0 chr2 24061479 24061580 -229195003 - L2 LINE L2 -2 3270 3160 642 60 0 0 chr2 24064128 24064211 -229192372 + (TC)n Simple_repeat Simple_repeat 1 83 0 183 270 135 0 chr2 24065845 24065919 -229190664 + L2 LINE L2 3126 3209 -63 207 370 8 8 chr2 24066352 24066471 -229190112 + (CACG)n Simple_repeat Simple_repeat 1 119 0 * 464 297 14 7 chr2 24066409 24066788 -229189795 + (CA)n Simple_repeat Simple_repeat 1 381 0 268 262 12 0 chr2 24066833 24067001 -229189582 + (CA)n Simple_repeat Simple_repeat 1 170 0 266 303 18 9 chr2 24067040 24067149 -229189434 + (CA)n Simple_repeat Simple_repeat 1 110 0 2393 70 3 0 chr2 24069391 24069692 -229186891 - AluY SINE Alu -9 302 1 823 169 0 15 chr2 24069719 24069855 -229186728 + AluJo SINE Alu 1 134 -178 730 217 17 22 chr2 24071585 24071765 -229184818 + MLT1H LTR MaLR 189 367 -182 2600 133 76 7 chr2 24071824 24072269 -229184314 + L1MB2 LINE L1 5696 6171 0 1452 201 143 39 chr2 24072365 24072798 -229183785 - MLT1H LTR MaLR 0 549 72 326 320 44 10 chr2 24073280 24073486 -229183097 - L2 LINE L2 -627 2687 2475 470 195 16 55 chr2 24074859 24074987 -229181596 - MIR3 SINE MIR -77 131 9 258 356 37 7 chr2 24075512 24075647 -229180936 - MIR SINE MIR -122 140 2 316 235 163 0 chr2 24076269 24076367 -229180216 - MIR SINE MIR -56 152 39 26 30 0 0 chr2 24077531 24077564 -229179019 + AT_rich Low_complexity Low_complexity 1 33 0 225 0 0 0 chr2 24077872 24077897 -229178686 + (TCC)n Simple_repeat Simple_repeat 1 25 0 487 263 39 39 chr2 24079536 24079715 -229176868 + MIR3 SINE MIR 11 189 -19 394 288 113 6 chr2 24083473 24083633 -229172950 - MIR3 SINE MIR -31 177 1 337 321 196 15 chr2 24087299 24087834 -229168749 + L2 LINE L2 2227 2858 -456 200 394 112 0 chr2 24087948 24088197 -229168386 + L2 LINE L2 2964 3240 -32 660 332 92 28 chr2 24092820 24093431 -229163152 + L2 LINE L2 1059 1708 -1606 1525 201 53 15 chr2 24093445 24093842 -229162741 - MER63B DNA MER1_type -24 412 1 212 323 86 21 chr2 24093844 24093937 -229162646 + L2 LINE L2 1712 1810 -1504 443 290 148 49 chr2 24094172 24094640 -229161943 + L2 LINE L2 2230 2753 -561 1976 158 0 14 chr2 24094640 24094937 -229161646 + AluJo SINE Alu 1 293 -19 443 290 148 49 chr2 24094937 24094975 -229161608 + L2 LINE L2 2753 2786 -528 2245 82 6 67 chr2 24095003 24095332 -229161251 - AluSp SINE Alu -4 309 1 1496 129 4 0 chr2 24095384 24095616 -229160967 - Tigger5 DNA MER2_type -5 2318 2086 449 339 35 71 chr2 24095694 24096060 -229160523 + L2 LINE L2 2897 3249 -23 2310 99 0 0 chr2 24097693 24097986 -229158597 + AluSx SINE Alu 1 293 -19 386 250 67 25 chr2 24098149 24098269 -229158314 + MIR3 SINE MIR 77 201 -7 2398 84 3 3 chr2 24098419 24098715 -229157868 + AluSg SINE Alu 1 296 -14 28 0 0 0 chr2 24101445 24101473 -229155110 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr2 24101782 24101807 -229154776 + AT_rich Low_complexity Low_complexity 1 25 0 2472 83 3 6 chr2 24102236 24102550 -229154033 - AluSp SINE Alu 0 313 1 464 326 82 43 chr2 24103346 24103818 -229152765 + L1ME LINE L1 5191 5680 -441 285 229 29 0 chr2 24103830 24103900 -229152683 - MER2 DNA MER2_type -6 339 268 1242 144 10 0 chr2 24103926 24104134 -229152449 - MER2 DNA MER2_type -135 210 1 219 239 22 0 chr2 24104151 24104197 -229152386 - L2 LINE L2 -18 3254 3208 33 25 0 0 chr2 24104467 24104507 -229152076 + AT_rich Low_complexity Low_complexity 1 40 0 2394 98 0 16 chr2 24104562 24104879 -229151704 - AluSx SINE Alu 0 312 1 297 216 129 17 chr2 24105102 24105218 -229151365 - MIR SINE MIR -57 205 77 288 93 0 0 chr2 24106290 24106333 -229150250 - MADE1 DNA Mariner 0 80 38 2617 128 43 47 chr2 24106616 24107125 -229149458 - L1MB7 LINE L1 0 6184 5678 446 289 20 0 chr2 24107126 24107275 -229149308 + MER103 DNA DNA 9 160 -6 2520 63 0 3 chr2 24107448 24107748 -229148835 - AluY SINE Alu -12 299 1 2404 110 0 0 chr2 24107781 24108081 -229148502 + AluSx SINE Alu 1 300 -12 2391 72 3 3 chr2 24108501 24108794 -229147789 + AluY SINE Alu 1 293 -18 22 0 0 0 chr2 24108806 24108828 -229147755 + AT_rich Low_complexity Low_complexity 1 22 0 315 0 0 0 chr2 24109647 24109682 -229146901 + (TTG)n Simple_repeat Simple_repeat 2 36 0 223 317 118 59 chr2 24109913 24110134 -229146449 + L2 LINE L2 1106 1339 -1975 255 365 0 8 chr2 24111219 24111345 -229145238 + L1MC2 LINE L1 5 129 -6411 2640 175 56 2 chr2 24111818 24112297 -229144286 - MLT1D LTR MaLR 0 505 1 601 245 26 86 chr2 24112314 24112616 -229143967 + L1MC2 LINE L1 922 1205 -5338 4158 160 13 4 chr2 24112617 24113322 -229143261 + L1M3f LINE L1 1 711 -4617 10471 161 42 93 chr2 24113336 24113500 -229143083 + L1MA5A LINE L1 14 185 -6603 2172 122 3 20 chr2 24113500 24113803 -229142780 + AluSx SINE Alu 1 298 -14 10471 161 42 93 chr2 24113803 24116112 -229140471 + L1MA5A LINE L1 185 2450 -4338 486 186 0 35 chr2 24116112 24116218 -229140365 + L1MA5A LINE L1 5869 5972 -828 1935 179 0 3 chr2 24116218 24116530 -229140053 + AluJb SINE Alu 1 311 -1 486 186 0 35 chr2 24116530 24116543 -229140040 + L1MA5A LINE L1 5972 5984 -816 520 148 16 49 chr2 24116545 24116728 -229139855 + GA-rich Low_complexity Low_complexity 4 180 0 4877 111 23 15 chr2 24116728 24117619 -229138964 + L1MA5A LINE L1 5975 6938 -1 2540 228 96 36 chr2 24117642 24117970 -229138613 + L1MC2 LINE L1 1427 1734 -4806 2730 46 0 0 chr2 24117970 24118275 -229138308 + AluY SINE Alu 1 305 -6 2540 228 96 36 chr2 24118275 24119006 -229137577 + L1MC2 LINE L1 1734 2550 -3990 2515 133 93 137 chr2 24119013 24119432 -229137151 + L1MB2 LINE L1 5444 5817 -354 2297 141 62 31 chr2 24119432 24119852 -229136731 - Tigger2a DNA MER2_type 0 434 2 2515 133 93 137 chr2 24119852 24120191 -229136392 + L1MB2 LINE L1 5817 6169 -2 282 217 38 57 chr2 24120188 24120345 -229136238 + L1MC2 LINE L1 2573 2726 -3995 * 5295 159 54 13 chr2 24120347 24121465 -229135118 + L1MC2 LINE L1 5582 6737 -1 311 176 104 64 chr2 24121468 24121593 -229134990 + L1MC4a LINE L1 5889 6018 -1790 775 241 37 78 chr2 24121623 24122046 -229134537 + L1MC4a LINE L1 6098 6537 -1271 2401 92 169 5 chr2 24122046 24122414 -229134169 - MSTA LTR MaLR 0 428 1 775 241 37 78 chr2 24122414 24122425 -229134158 + L1MC4a LINE L1 6537 6516 -1292 1575 190 145 18 chr2 24122425 24122867 -229133716 + LTR54B LTR ERV1 1 498 0 775 241 37 78 chr2 24122867 24122891 -229133692 + L1MC4a LINE L1 6515 6538 -1270 2505 230 94 41 chr2 24122899 24123593 -229132990 + L1MDa LINE L1 2666 3432 -3108 2673 68 0 0 chr2 24123593 24123904 -229132679 + AluY SINE Alu 1 311 0 2505 230 94 41 chr2 24123904 24124218 -229132365 + L1MDa LINE L1 3432 3728 -2812 1774 198 46 86 chr2 24124225 24124754 -229131829 + L1MC5 LINE L1 6834 7328 -633 1092 141 141 24 chr2 24124754 24124912 -229131671 - MER33 DNA MER1_type -2261 324 186 1377 178 75 68 chr2 24124912 24125205 -229131378 + AluJo SINE Alu 1 295 -17 1092 141 141 24 chr2 24125205 24125336 -229131247 - MER33 DNA MER1_type -2399 186 1 1774 198 46 86 chr2 24125336 24125527 -229131056 + L1MC5 LINE L1 7328 7525 -436 439 298 93 52 chr2 24125574 24125803 -229130780 + L1ME3A LINE L1 5925 6163 -1 696 263 56 16 chr2 24126045 24126296 -229130287 + MIR SINE MIR 2 262 0 599 336 128 52 chr2 24126366 24127311 -229129272 + L2 LINE L2 1825 3082 -190 2211 118 113 42 chr2 24127311 24127364 -229129219 - MSTA LTR MaLR 0 428 380 2187 118 3 10 chr2 24127364 24127668 -229128915 - AluSx SINE Alu -10 302 1 2211 118 113 42 chr2 24127668 24128014 -229128569 - MSTA LTR MaLR -48 380 1 599 336 128 52 chr2 24128014 24128211 -229128372 + L2 LINE L2 3082 3263 -9 317 295 16 25 chr2 24129399 24129521 -229127062 - HAL1 LINE L1 -1753 754 634 825 207 39 17 chr2 24129537 24129769 -229126814 + HAL1 LINE L1 800 1036 -1471 44577 35 1 1 chr2 24129777 24135920 -229120663 + L1PA4 LINE L1 13 6149 -6 388 300 90 9 chr2 24136065 24136288 -229120295 + HAL1 LINE L1 1284 1524 -983 1275 226 100 102 chr2 24136314 24136493 -229120090 + HAL1 LINE L1 1769 1947 -560 2081 102 27 14 chr2 24136493 24136787 -229119796 + AluSx SINE Alu 1 298 -14 1275 226 100 102 chr2 24136787 24136845 -229119738 + HAL1 LINE L1 1947 2004 -503 1689 154 7 7 chr2 24136845 24137117 -229119466 - AluJo SINE Alu -23 289 18 1275 226 100 102 chr2 24137117 24137617 -229118966 + HAL1 LINE L1 2004 2506 -1 957 272 1 25 chr2 24137698 24137951 -229118632 - MIR SINE MIR -4 258 14 1937 122 0 4 chr2 24138212 24138490 -229118093 + AluSx SINE Alu 1 277 -35 228 130 0 0 chr2 24138492 24138538 -229118045 + (CAAG)n Simple_repeat Simple_repeat 3 48 0 790 37 0 59 chr2 24138553 24138689 -229117894 + (GGAA)n Simple_repeat Simple_repeat 2 129 0 644 292 84 0 chr2 24138736 24138938 -229117645 + MIR SINE MIR 16 234 -28 377 253 110 32 chr2 24138959 24139113 -229117470 + L2 LINE L2 3109 3274 -39 222 258 298 26 chr2 24139202 24139353 -229117230 + L2 LINE L2 2909 3100 -172 986 194 116 41 chr2 24139427 24139669 -229116914 + MIR SINE MIR 2 261 -1 234 305 84 21 chr2 24139676 24139771 -229116812 + L2 LINE L2 3163 3263 -9 216 328 67 44 chr2 24139777 24139957 -229116626 - L2 LINE L2 -690 2624 2441 613 233 0 0 chr2 24140146 24140266 -229116317 + L2 LINE L2 3193 3312 -1 266 119 45 15 chr2 24140507 24140574 -229116009 + (TA)n Simple_repeat Simple_repeat 1 69 0 264 303 124 0 chr2 24140876 24140965 -229115618 + L2 LINE L2 3143 3242 -30 22 0 0 0 chr2 24143132 24143154 -229113429 + AT_rich Low_complexity Low_complexity 1 22 0 250 162 27 0 chr2 24145655 24145729 -229110854 + (TA)n Simple_repeat Simple_repeat 1 76 0 590 214 103 0 chr2 24145764 24145890 -229110693 - MIR SINE MIR -104 158 20 353 257 89 10 chr2 24146514 24146615 -229109968 + L2 LINE L2 3190 3298 -15 257 317 14 35 chr2 24146695 24146837 -229109746 + L3 LINE CR1 1275 1413 -164 273 357 123 6 chr2 24150023 24150194 -229106389 - MIR SINE MIR -25 237 47 267 271 156 10 chr2 24153474 24153570 -229103013 + L2 LINE L2 3201 3310 -3 2004 142 0 10 chr2 24153587 24153897 -229102686 + AluSx SINE Alu 1 307 -5 585 42 0 0 chr2 24153908 24153980 -229102603 + (CA)n Simple_repeat Simple_repeat 2 73 0 1312 113 0 10 chr2 24154564 24154759 -229101824 + MER46A DNA MER2_type 44 236 0 416 301 58 90 chr2 24155959 24156458 -229100125 + L2 LINE L2 2014 2496 -818 2081 200 20 38 chr2 24156499 24156552 -229100031 - L1MB8 LINE L1 -192 5986 5934 472 229 8 0 chr2 24156552 24156670 -229099913 - L1MB7 LINE L1 -10 6174 6056 2081 200 20 38 chr2 24156670 24156805 -229099778 - L1MB8 LINE L1 -244 5934 5798 1776 176 0 7 chr2 24156805 24157100 -229099483 - AluJo SINE Alu -19 293 1 2081 200 20 38 chr2 24157100 24157415 -229099168 - L1MB8 LINE L1 -380 5798 5550 381 278 19 28 chr2 24157531 24157639 -229098944 - MER5A DNA MER1_type -3 186 80 273 289 123 8 chr2 24157705 24157907 -229098676 - L2 LINE L2 -3 3310 3030 229 311 66 78 chr2 24158005 24158262 -229098321 + L2 LINE L2 2923 3176 -96 317 338 34 81 chr2 24159998 24160232 -229096351 - L2 LINE L2 -173 3099 2877 1774 189 153 27 chr2 24160237 24160713 -229095870 + LTR10A LTR ERV1 13 548 -61 706 326 65 41 chr2 24160811 24161098 -229095485 - L2 LINE L2 -611 2703 2401 182 62 31 0 chr2 24161098 24161130 -229095453 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 706 326 65 41 chr2 24161130 24161256 -229095327 - L2 LINE L2 -913 2401 2280 1357 245 20 69 chr2 24161347 24161461 -229095122 - L1ME1 LINE L1 -12 6227 6109 1489 144 6 117 chr2 24161461 24161794 -229094789 + AluJo SINE Alu 1 296 -6 1357 245 20 69 chr2 24161794 24162266 -229094317 - L1ME1 LINE L1 -130 6109 5675 414 216 10 62 chr2 24162269 24162366 -229094217 + MER2 DNA MER2_type 6 97 -248 2065 89 4 7 chr2 24162366 24162647 -229093936 + AluSg SINE Alu 1 280 -30 30 0 0 0 chr2 24162647 24162677 -229093906 + AT_rich Low_complexity Low_complexity 1 30 0 1095 186 33 89 chr2 24162747 24162920 -229093663 - L1ME1 LINE L1 -562 5673 5492 1733 118 114 7 chr2 24162920 24163191 -229093392 - AluSg1 SINE Alu -9 300 1 1095 186 33 89 chr2 24163191 24163237 -229093346 - L1ME1 LINE L1 -743 5492 5445 2069 111 7 21 chr2 24163237 24163556 -229093027 + AluSx SINE Alu 3 317 0 1095 186 33 89 chr2 24163556 24163697 -229092886 - L1ME1 LINE L1 -790 5445 5322 * 3322 226 82 13 chr2 24163690 24164660 -229091923 - L1ME1 LINE L1 -1115 5100 4064 482 161 117 72 chr2 24164761 24164941 -229091642 - L1ME1 LINE L1 -4121 2275 2088 * 1534 246 74 32 chr2 24164939 24165414 -229091169 - L1ME1 LINE L1 -5863 533 39 354 253 27 33 chr2 24165437 24165587 -229090996 - L1ME4a LINE L1 -279 5842 5694 1514 167 10 48 chr2 24165956 24166249 -229090334 - AluJo SINE Alu -30 282 1 1441 182 14 67 chr2 24166431 24166728 -229089855 + AluJo SINE Alu 1 281 -31 303 256 56 72 chr2 24166960 24167085 -229089498 + MIR SINE MIR 29 151 -111 1552 206 16 16 chr2 24167380 24167686 -229088897 + AluJo SINE Alu 1 306 -6 2268 116 0 0 chr2 24167825 24168135 -229088448 + AluSq SINE Alu 1 310 -3 2177 93 4 0 chr2 24168404 24168719 -229087864 - AluSc SINE Alu 0 316 1 360 297 203 17 chr2 24168935 24169068 -229087515 + L2 LINE L2 2132 2239 -1075 2059 86 4 0 chr2 24169068 24169347 -229087236 + AluSc SINE Alu 25 304 0 360 297 203 17 chr2 24169347 24169502 -229087081 + L2 LINE L2 2239 2475 -839 1777 158 70 57 chr2 24170101 24170486 -229086097 + MLT1B LTR MaLR 1 390 0 228 143 0 0 chr2 24170555 24170597 -229085986 + (TA)n Simple_repeat Simple_repeat 2 43 0 208 306 0 0 chr2 24171800 24171862 -229084721 - MIR SINE MIR -3 259 198 240 88 0 0 chr2 24171875 24171909 -229084674 + MER116 DNA Mariner 47 80 0 632 265 54 6 chr2 24171917 24172083 -229084500 - MIR SINE MIR -70 192 19 455 304 103 38 chr2 24172167 24172351 -229084232 + MER91A DNA MER1_type 1 196 0 2527 77 0 0 chr2 24172371 24172682 -229083901 - AluY SINE Alu 0 311 1 495 262 40 20 chr2 24172706 24172908 -229083675 + L1ME LINE L1 5563 5768 -353 1699 172 3 14 chr2 24173170 24173466 -229083117 + AluJo SINE Alu 1 293 -19 333 0 0 0 chr2 24173475 24173512 -229083071 + (TG)n Simple_repeat Simple_repeat 2 38 0 183 275 0 0 chr2 24173755 24173795 -229082788 - MER5B DNA MER1_type -138 40 1 2059 119 7 13 chr2 24173825 24174128 -229082455 + AluSx SINE Alu 1 301 -11 1625 162 101 204 chr2 24174242 24174537 -229082046 + MER90 LTR ERV1 1 325 -289 417 20 0 0 chr2 24174537 24174587 -229081996 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 2108 134 0 0 chr2 24174590 24174889 -229081694 + AluSx SINE Alu 1 299 -13 1625 162 101 204 chr2 24174889 24175009 -229081574 + MER90 LTR ERV1 327 458 -156 1871 168 0 13 chr2 24175009 24175324 -229081259 - AluJb SINE Alu -1 311 1 1625 162 101 204 chr2 24175324 24175588 -229080995 + MER90 LTR ERV1 458 614 0 29 60 0 0 chr2 24176319 24176369 -229080214 + AT_rich Low_complexity Low_complexity 1 50 0 24 0 0 0 chr2 24177922 24177946 -229078637 + AT_rich Low_complexity Low_complexity 1 24 0 274 265 44 0 chr2 24178147 24178215 -229078368 + MIR SINE MIR 120 190 -72 2184 129 42 3 chr2 24179532 24179866 -229076717 - MER7A DNA MER2_type 0 346 2 25 65 0 0 chr2 24179961 24180007 -229076576 + AT_rich Low_complexity Low_complexity 1 46 0 308 341 61 15 chr2 24182585 24182717 -229073866 + L2 LINE L2 3134 3271 -1 475 218 82 9 chr2 24182973 24183083 -229073500 - MIR SINE MIR -71 191 74 2690 186 127 17 chr2 24184058 24184656 -229071927 - L1MB8 LINE L1 -61 6117 5433 340 139 38 38 chr2 24184656 24184735 -229071848 + MADE1 DNA Mariner 1 79 -1 2690 186 127 17 chr2 24184735 24184824 -229071759 - L1MB8 LINE L1 -745 5433 5355 2425 166 55 7 chr2 24184818 24185275 -229071308 - L1MB3 LINE L1 -242 5941 5463 * 2068 93 54 0 chr2 24185275 24185554 -229071029 - AluY SINE Alu -17 294 1 2475 77 0 3 chr2 24185888 24186198 -229070385 + AluY SINE Alu 1 309 -2 21 36 0 0 chr2 24186793 24186821 -229069762 + AT_rich Low_complexity Low_complexity 1 28 0 254 325 12 0 chr2 24186902 24186982 -229069601 - L2 LINE L2 -5 3267 3187 1093 171 157 51 chr2 24187007 24187223 -229069360 - Charlie1 DNA MER1_type 0 2761 2569 1984 146 10 0 chr2 24187223 24187517 -229069066 - AluJb SINE Alu -15 297 1 1093 171 157 51 chr2 24187517 24187746 -229068837 - Charlie1 DNA MER1_type -192 2569 1 306 171 86 71 chr2 24187754 24187894 -229068689 - Charlie7 DNA MER1_type 0 2612 2471 354 244 101 6 chr2 24188315 24188483 -229068100 - L1ME4a LINE L1 0 6121 5938 395 214 0 0 chr2 24188534 24188604 -229067979 - AluJ/FRAM SINE Alu -3 299 230 2289 110 7 0 chr2 24188806 24189116 -229067467 + AluSx SINE Alu 1 312 0 860 139 8 0 chr2 24189159 24189281 -229067302 + FLAM_C SINE Alu 1 123 -20 251 247 49 12 chr2 24190031 24190112 -229066471 - MIR SINE MIR -107 155 72 1762 134 106 12 chr2 24190761 24191090 -229065493 - MER46B DNA MER2_type -1 235 1 303 286 252 7 chr2 24191103 24191250 -229065333 - MIR SINE MIR -37 225 43 22 0 0 0 chr2 24191250 24191272 -229065311 + AT_rich Low_complexity Low_complexity 1 22 0 2364 103 7 0 chr2 24192498 24192808 -229063775 + AluSx SINE Alu 1 312 0 23 0 0 0 chr2 24193287 24193310 -229063273 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 24194024 24194046 -229062537 + AT_rich Low_complexity Low_complexity 1 22 0 186 191 24 0 chr2 24194385 24194427 -229062156 + MER5C DNA MER1_type 74 116 -208 21 57 0 0 chr2 24194912 24194947 -229061636 + AT_rich Low_complexity Low_complexity 1 35 0 26 0 0 0 chr2 24195348 24195374 -229061209 + AT_rich Low_complexity Low_complexity 1 26 0 252 86 0 0 chr2 24196521 24196556 -229060027 + (CA)n Simple_repeat Simple_repeat 2 36 0 447 257 44 71 chr2 24196612 24196795 -229059788 + MER5A DNA MER1_type 9 186 -3 2260 108 0 9 chr2 24198065 24198380 -229058203 + AluSq SINE Alu 1 312 -1 587 297 50 53 chr2 24198565 24198865 -229057718 - L1MC4a LINE L1 -1921 5887 5589 582 332 113 39 chr2 24198891 24199863 -229056720 - L1MC4a LINE L1 -743 5403 4562 419 289 132 0 chr2 24200007 24200128 -229056455 - MIR SINE MIR -111 151 15 189 107 0 0 chr2 24200479 24200507 -229056076 + (CA)n Simple_repeat Simple_repeat 2 29 0 1996 97 0 0 chr2 24200778 24201037 -229055546 + AluY SINE Alu 37 295 -16 470 113 62 0 chr2 24201037 24201197 -229055386 + (TA)n Simple_repeat Simple_repeat 1 170 0 391 163 36 9 chr2 24201211 24201444 -229055139 + (TA)n Simple_repeat Simple_repeat 1 239 0 2161 106 3 0 chr2 24204175 24204467 -229052116 + AluSx SINE Alu 1 293 -19 263 214 51 51 chr2 24204631 24204729 -229051854 + MIR3 SINE MIR 77 174 -34 420 117 0 0 chr2 24204847 24204924 -229051659 + (G)n Simple_repeat Simple_repeat 1 77 0 379 305 109 31 chr2 24205097 24205418 -229051165 - L1MC4a LINE L1 -1624 4522 4177 2451 63 0 0 chr2 24207428 24207752 -229048831 + AluSq SINE Alu 1 324 0 1036 177 14 146 chr2 24207920 24208215 -229048368 + MLT1A1 LTR MaLR 52 293 -72 1919 52 0 0 chr2 24208215 24208468 -229048115 + L1PA7 LINE L1 5911 6163 0 1036 177 14 146 chr2 24208468 24208533 -229048050 + MLT1A1 LTR MaLR 293 365 0 25 31 0 0 chr2 24208538 24208570 -229048013 + AT_rich Low_complexity Low_complexity 1 32 0 418 297 104 21 chr2 24208715 24208989 -229047594 + L1 LINE L1 4063 4366 -1780 22 0 0 0 chr2 24209008 24209030 -229047553 + AT_rich Low_complexity Low_complexity 1 22 0 2017 102 46 7 chr2 24209280 24209565 -229047018 + AluSc SINE Alu 1 296 -13 366 365 83 10 chr2 24209604 24209796 -229046787 - MIR SINE MIR -50 212 7 215 165 41 52 chr2 24209969 24210066 -229046517 + (TTATA)n Simple_repeat Simple_repeat 1 96 0 1813 149 6 35 chr2 24210159 24210474 -229046109 + AluJb SINE Alu 7 312 0 23 68 0 0 chr2 24210548 24210592 -229045991 + AT_rich Low_complexity Low_complexity 1 44 0 644 203 16 0 chr2 24210671 24210794 -229045789 + FLAM_A SINE Alu 1 125 -8 21 36 0 0 chr2 24210953 24210981 -229045602 + AT_rich Low_complexity Low_complexity 1 28 0 207 314 164 7 chr2 24211158 24211298 -229045285 - L2 LINE L2 -212 3060 2899 304 359 116 33 chr2 24211393 24211472 -229045111 - L2 LINE L2 -455 2859 2788 2209 90 10 10 chr2 24211472 24211773 -229044810 + AluSq SINE Alu 1 301 -12 304 359 116 33 chr2 24211773 24212306 -229044277 - L2 LINE L2 -526 2788 2196 549 298 47 30 chr2 24212527 24212762 -229043821 + L2 LINE L2 3075 3313 0 774 296 101 32 chr2 24212810 24213435 -229043148 + L1ME4a LINE L1 5452 6119 -2 517 299 42 0 chr2 24213946 24214090 -229042493 + MIR SINE MIR 61 210 -52 364 318 188 31 chr2 24214173 24214365 -229042218 + L2 LINE L2 3021 3242 -30 481 53 0 27 chr2 24214768 24214843 -229041740 + (CA)n Simple_repeat Simple_repeat 2 74 0 505 142 38 0 chr2 24214843 24214949 -229041634 + GA-rich Low_complexity Low_complexity 3 112 0 1928 147 24 0 chr2 24215629 24215922 -229040661 + AluSx SINE Alu 1 300 -12 1772 58 0 14 chr2 24217153 24217376 -229039207 + AluY SINE Alu 76 295 -16 27 29 0 0 chr2 24218210 24218244 -229038339 + AT_rich Low_complexity Low_complexity 1 34 0 941 72 16 16 chr2 24218244 24218369 -229038214 - AluSq/x SINE Alu -188 125 1 182 322 102 51 chr2 24218565 24218666 -229037917 + MIR SINE MIR 2 117 -145 2157 112 0 33 chr2 24218666 24218970 -229037613 + AluSx SINE Alu 1 294 -18 182 322 102 51 chr2 24218970 24219045 -229037538 + MIR SINE MIR 117 187 -75 2410 71 3 7 chr2 24219047 24219355 -229037228 + AluSq SINE Alu 1 307 -6 343 240 21 52 chr2 24219477 24219573 -229037010 - L2 LINE L2 0 3272 3180 22 56 0 0 chr2 24220186 24220222 -229036361 + AT_rich Low_complexity Low_complexity 1 36 0 1623 151 3 60 chr2 24220376 24220675 -229035908 - AluJb SINE Alu -30 282 1 1601 155 30 30 chr2 24221353 24221657 -229034926 - AluJo SINE Alu -8 304 1 427 286 32 22 chr2 24222463 24222640 -229033943 + MER5A DNA MER1_type 3 189 0 362 209 99 0 chr2 24222718 24222809 -229033774 - MER94 DNA DNA -34 100 1 25 0 0 0 chr2 24224486 24224511 -229032072 + AT_rich Low_complexity Low_complexity 1 25 0 31 0 0 0 chr2 24225464 24225495 -229031088 + AT_rich Low_complexity Low_complexity 1 31 0 210 323 0 0 chr2 24225598 24225663 -229030920 - MIR SINE MIR -94 114 50 1713 165 16 36 chr2 24225883 24226186 -229030397 + AluJb SINE Alu 2 298 -14 2145 122 3 0 chr2 24226402 24226697 -229029886 - AluSx SINE Alu -16 296 1 180 367 112 10 chr2 24227287 24227385 -229029198 - MIR3 SINE MIR -26 182 75 2417 233 148 23 chr2 24227863 24228635 -229027948 + L2 LINE L2 1201 2068 -1246 235 214 0 0 chr2 24228649 24228691 -229027892 + L2 LINE L2 2178 2219 -1095 994 150 0 93 chr2 24228833 24229059 -229027524 - MER3 DNA MER1_type -4 205 1 2416 103 0 0 chr2 24230619 24230931 -229025652 - AluSx SINE Alu 0 312 1 449 175 185 37 chr2 24231051 24231240 -229025343 + L1MB8 LINE L1 5116 5332 -814 849 163 0 0 chr2 24231240 24231369 -229025214 + FLAM_C SINE Alu 1 129 -14 3011 163 113 39 chr2 24231374 24232123 -229024460 + L1MB8 LINE L1 5315 6007 -171 2272 121 0 0 chr2 24232123 24232420 -229024163 + AluSq SINE Alu 1 297 -16 3011 163 113 39 chr2 24232420 24232440 -229024143 + L1MB8 LINE L1 6007 6024 -154 8884 168 60 17 chr2 24232440 24234122 -229022461 - MER52A LTR ERV1 0 1755 1 3011 163 113 39 chr2 24234122 24234150 -229022433 + L1MB8 LINE L1 6024 6172 -6 620 265 71 18 chr2 24235047 24235330 -229021253 - L1M4 LINE L1 -1089 5057 4760 969 303 35 25 chr2 24235626 24236147 -229020436 - L1M4 LINE L1 -1909 4237 3712 1564 207 39 55 chr2 24236182 24236674 -229019909 - L1ME1 LINE L1 -4 6231 5748 255 229 49 57 chr2 24236842 24236964 -229019619 - L1ME1 LINE L1 -2895 3320 3200 567 268 59 55 chr2 24237043 24237389 -229019194 - L1ME1 LINE L1 -3364 2851 2501 1560 151 0 103 chr2 24237389 24237708 -229018875 - AluJb SINE Alu -16 286 1 567 268 59 55 chr2 24237708 24237868 -229018715 - L1ME1 LINE L1 -3714 2501 2343 * 1537 116 0 34 chr2 24237860 24237981 -229018602 - L1MB7 LINE L1 -236 5948 5824 1667 204 0 7 chr2 24237981 24238280 -229018303 - AluJo SINE Alu -11 301 5 1537 116 0 34 chr2 24238280 24238425 -229018158 - L1MB7 LINE L1 -360 5824 5691 487 267 25 4 chr2 24238433 24238685 -229017898 - L1ME1 LINE L1 -3851 2364 2148 1610 236 65 21 chr2 24239142 24239804 -229016779 + L1ME LINE L1 784 1515 -5073 292 262 7 12 chr2 24239816 24239955 -229016628 + L1ME LINE L1 1552 1836 -4885 2431 260 81 44 chr2 24239966 24240402 -229016181 + L1MEc LINE L1 236 654 -5742 2311 105 0 3 chr2 24240402 24240708 -229015875 - AluSx SINE Alu -7 305 1 2431 260 81 44 chr2 24240708 24241623 -229014960 + L1MEc LINE L1 654 1638 -4758 1632 227 70 39 chr2 24241625 24242039 -229014544 + L1MB7 LINE L1 5585 6023 -161 2161 141 0 0 chr2 24242039 24242344 -229014239 - AluJo SINE Alu -3 309 5 1632 227 70 39 chr2 24242344 24242501 -229014082 + L1MB7 LINE L1 6023 6174 -10 1151 185 58 29 chr2 24242514 24242608 -229013975 + AluJb SINE Alu 42 132 -180 2205 103 0 3 chr2 24242608 24242899 -229013684 + AluSg SINE Alu 1 290 -20 1151 185 58 29 chr2 24242899 24243047 -229013536 + AluJb SINE Alu 132 291 -21 2258 102 0 26 chr2 24243089 24243394 -229013189 + AluSg SINE Alu 1 297 -13 1144 227 139 15 chr2 24243461 24243605 -229012978 + L1MEc LINE L1 1730 1855 -4541 1794 129 85 0 chr2 24243605 24243877 -229012706 + AluSx SINE Alu 1 295 -17 1144 227 139 15 chr2 24243877 24244207 -229012376 + L1MEc LINE L1 1855 2263 -4133 297 243 7 79 chr2 24244217 24244369 -229012214 + L1MA10 LINE L1 6187 6327 -7 521 227 99 58 chr2 24244371 24244613 -229011970 + L1ME LINE L1 2385 2636 -3904 593 256 81 49 chr2 24244615 24244934 -229011649 + L1ME LINE L1 2660 2996 -3544 2094 111 17 0 chr2 24244934 24245223 -229011360 + AluSx SINE Alu 1 294 -18 593 256 81 49 chr2 24245223 24245313 -229011270 + L1ME LINE L1 2996 3082 -3458 1273 79 22 11 chr2 24245365 24245543 -229011040 + AluY SINE Alu 122 301 -10 891 185 46 46 chr2 24245556 24245881 -229010702 + L1ME LINE L1 3178 3502 -3038 1180 155 33 59 chr2 24245883 24246154 -229010429 + L1MC2 LINE L1 5839 6102 -242 1257 188 50 122 chr2 24246164 24246526 -229010057 + MLT1A1 LTR MaLR 1 327 -38 1686 182 17 3 chr2 24246534 24246825 -229009758 - AluJb SINE Alu -17 295 1 1297 202 65 12 chr2 24246837 24247159 -229009424 - L1MC1 LINE L1 0 6333 5995 4271 222 79 69 chr2 24247197 24247680 -229008903 + L1ME LINE L1 3546 4023 -2535 809 173 0 0 chr2 24247680 24247807 -229008776 - FLAM_C SINE Alu -4 129 3 4271 222 79 69 chr2 24247807 24248021 -229008562 + L1ME LINE L1 4023 4233 -2325 2259 104 0 0 chr2 24248021 24248319 -229008264 + AluSx SINE Alu 1 298 -14 4271 222 79 69 chr2 24248319 24249348 -229007235 + L1ME LINE L1 4233 5250 -1308 2136 125 3 0 chr2 24249348 24249645 -229006938 + AluSx SINE Alu 1 298 -14 4271 222 79 69 chr2 24249645 24249780 -229006803 + L1ME LINE L1 5250 5382 -1176 2280 101 0 0 chr2 24249780 24250078 -229006505 + AluSq SINE Alu 1 298 -15 4271 222 79 69 chr2 24250078 24250296 -229006287 + L1ME LINE L1 5382 5596 -962 2138 118 7 0 chr2 24250296 24250592 -229005991 + AluSx SINE Alu 1 298 -14 4271 222 79 69 chr2 24250592 24251020 -229005563 + L1ME LINE L1 5596 6083 -475 1504 192 0 8 chr2 24251024 24251279 -229005304 + AluJo SINE Alu 35 287 -25 2314 90 0 7 chr2 24251290 24251589 -229004994 + AluSg SINE Alu 1 297 -13 1084 199 0 5 chr2 24251589 24251800 -229004783 - MER46A DNA MER2_type -26 210 1 262 214 14 90 chr2 24251810 24251955 -229004628 + L1ME LINE L1 6097 6230 -330 2106 139 3 0 chr2 24251962 24252263 -229004320 + AluSx SINE Alu 1 302 -10 873 221 4 83 chr2 24252276 24252310 -229004273 - MER58A DNA MER1_type -2199 221 186 736 158 0 43 chr2 24252310 24252449 -229004134 + FLAM_C SINE Alu 1 133 0 873 221 4 83 chr2 24252449 24252654 -229003929 - MER58A DNA MER1_type -2234 186 1 28 61 0 0 chr2 24252903 24252952 -229003631 + AT_rich Low_complexity Low_complexity 1 49 0 2501 66 0 7 chr2 24253123 24253426 -229003157 - AluY SINE Alu -10 301 1 2271 98 0 0 chr2 24253476 24253804 -229002779 - AluSx SINE Alu 0 328 1 1740 166 37 7 chr2 24253870 24254166 -229002417 - AluJo SINE Alu -7 305 1 837 278 99 36 chr2 24254168 24254614 -229001969 - L1MC1 LINE L1 -1983 5825 5352 240 35 0 0 chr2 24254673 24254702 -229001881 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1198 176 10 0 chr2 24254706 24254905 -229001678 - AluJb SINE Alu -25 287 87 1265 181 75 80 chr2 24254997 24255049 -229001534 + MSTD LTR MaLR 1 52 -344 2250 96 0 7 chr2 24255049 24255350 -229001233 + AluSx SINE Alu 1 299 -13 1265 181 75 80 chr2 24255350 24255684 -229000899 + MSTD LTR MaLR 52 385 -11 2125 127 0 0 chr2 24256072 24256377 -229000206 + AluSq SINE Alu 1 305 0 281 156 0 0 chr2 24256431 24256476 -229000107 + AluJb SINE Alu 1 45 -258 315 374 96 0 chr2 24256583 24256802 -228999781 - MIR SINE MIR -21 241 2 21 0 0 0 chr2 24256859 24256880 -228999703 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 24257064 24257085 -228999498 + AT_rich Low_complexity Low_complexity 1 21 0 1693 188 20 0 chr2 24257302 24257594 -228998989 + AluJo SINE Alu 1 298 -14 899 201 6 6 chr2 24257785 24257959 -228998624 - FRAM SINE Alu -3 173 1 1347 167 4 28 chr2 24258459 24258710 -228997873 + AluJb SINE Alu 52 296 -16 186 71 0 0 chr2 24258710 24258738 -228997845 + (CAGAA)n Simple_repeat Simple_repeat 2 29 0 1969 119 53 0 chr2 24259403 24259688 -228996895 - AluSx SINE Alu -12 300 1 25 31 0 0 chr2 24260090 24260122 -228996461 + AT_rich Low_complexity Low_complexity 1 32 0 25 51 0 0 chr2 24260341 24260380 -228996203 + AT_rich Low_complexity Low_complexity 1 39 0 26 50 0 0 chr2 24260577 24260617 -228995966 + AT_rich Low_complexity Low_complexity 1 40 0 2340 90 0 0 chr2 24260630 24260929 -228995654 + AluSq SINE Alu 1 299 -14 22 0 0 0 chr2 24260940 24260962 -228995621 + AT_rich Low_complexity Low_complexity 1 22 0 733 168 0 39 chr2 24260965 24261120 -228995463 + MER106B DNA MER1_type 1 149 -910 2363 91 7 3 chr2 24261507 24261814 -228994769 + AluSp SINE Alu 1 308 -5 488 314 65 90 chr2 24262374 24262928 -228993655 + L2 LINE L2 2182 2721 -593 1515 171 105 0 chr2 24263700 24263957 -228992626 - AluJo SINE Alu -28 284 1 21 0 0 0 chr2 24264285 24264306 -228992277 + AT_rich Low_complexity Low_complexity 1 21 0 2060 118 3 0 chr2 24265331 24265618 -228990965 + AluSg SINE Alu 21 308 -2 1946 154 7 0 chr2 24265669 24265968 -228990615 - AluJb SINE Alu -11 301 1 204 283 38 47 chr2 24266688 24266794 -228989789 + L2 LINE L2 791 895 -2419 2184 130 0 0 chr2 24267260 24267559 -228989024 - AluSg SINE Alu -11 299 1 419 159 0 34 chr2 24267561 24267649 -228988934 - AluJ/FRAM SINE Alu -8 304 220 631 197 7 56 chr2 24268744 24268886 -228987697 + MER2 DNA MER2_type 1 135 -210 444 195 18 2 chr2 24268922 24269104 -228987479 + MER2 DNA MER2_type 121 345 0 2098 131 0 0 chr2 24269288 24269586 -228986997 + AluSx SINE Alu 1 298 -14 715 177 47 5 chr2 24269628 24269820 -228986763 + L1M4 LINE L1 4966 5165 -981 1765 150 92 0 chr2 24269820 24270093 -228986490 + AluJb SINE Alu 1 298 -14 2297 95 0 0 chr2 24270158 24270454 -228986129 + AluY SINE Alu 1 296 -15 2104 119 3 23 chr2 24270603 24270905 -228985678 + AluSg SINE Alu 1 296 -14 2311 96 0 0 chr2 24271374 24271675 -228984908 - AluSc SINE Alu -8 301 1 2328 97 0 0 chr2 24271683 24271983 -228984600 - AluSg SINE Alu -10 300 1 2463 87 3 0 chr2 24272169 24272480 -228984103 + AluSp SINE Alu 1 312 -1 380 211 11 11 chr2 24272540 24272630 -228983953 + FLAM_C SINE Alu 29 118 -15 1624 107 4 43 chr2 24272634 24272868 -228983715 + AluSx SINE Alu 49 273 -39 642 104 0 0 chr2 24272869 24272965 -228983618 + (GGGGA)n Simple_repeat Simple_repeat 2 97 0 1879 116 55 10 chr2 24272972 24273265 -228983318 + AluSg SINE Alu 1 306 -4 483 153 382 0 chr2 24273292 24273423 -228983160 + AluJb SINE Alu 132 312 0 1727 185 62 58 chr2 24273425 24273462 -228983121 + L1ME LINE L1 5128 5163 -1003 2172 122 0 0 chr2 24273462 24273750 -228982833 + AluSx SINE Alu 1 288 -24 2306 67 0 3 chr2 24273760 24274073 -228982510 + AluY SINE Alu 1 312 0 1727 185 62 58 chr2 24274073 24274700 -228981883 + L1ME LINE L1 5171 5819 -347 1184 238 27 47 chr2 24274714 24275012 -228981571 + AluJo SINE Alu 2 293 -9 264 259 12 37 chr2 24275057 24275138 -228981445 + MIR SINE MIR 42 120 -88 2098 127 10 10 chr2 24275156 24275456 -228981127 + AluSx SINE Alu 1 300 -12 487 66 0 0 chr2 24275745 24275806 -228980777 - AluY SINE Alu -185 126 66 1205 97 0 0 chr2 24275806 24275960 -228980623 + AluY SINE Alu 142 295 -16 2207 92 13 7 chr2 24276741 24277044 -228979539 - AluSc SINE Alu -4 305 1 2098 126 3 0 chr2 24277109 24277394 -228979189 - AluSq SINE Alu -15 298 13 747 155 0 63 chr2 24277462 24277580 -228979003 + FLAM_A SINE Alu 1 110 -192 2048 134 27 0 chr2 24277580 24277879 -228978704 - AluSx SINE Alu -5 307 1 747 155 0 63 chr2 24277879 24277902 -228978681 + FLAM_A SINE Alu 110 133 -169 2236 94 3 7 chr2 24277910 24278218 -228978365 + AluY SINE Alu 1 307 -4 1898 168 0 19 chr2 24278447 24278756 -228977827 + AluJb SINE Alu 1 303 -9 2154 116 0 0 chr2 24279317 24279610 -228976973 + AluSq SINE Alu 1 293 -20 189 114 29 29 chr2 24280411 24280446 -228976137 - L2 LINE L2 -10 3303 3269 1899 144 0 3 chr2 24281395 24281679 -228974904 - AluJb SINE Alu -7 305 23 23 54 0 0 chr2 24281783 24281820 -228974763 + AT_rich Low_complexity Low_complexity 1 37 0 30 77 0 0 chr2 24281946 24282011 -228974572 + AT_rich Low_complexity Low_complexity 1 65 0 2427 85 0 0 chr2 24282105 24282411 -228974172 + AluY SINE Alu 1 306 -5 561 225 42 0 chr2 24282432 24282452 -228974131 - FLAM_A SINE Alu -186 125 107 1817 110 68 4 chr2 24282452 24282715 -228973868 + AluSg SINE Alu 2 281 -29 561 225 42 0 chr2 24282715 24282814 -228973769 - FLAM_A SINE Alu -204 107 1 22 0 0 0 chr2 24282823 24282845 -228973738 + AT_rich Low_complexity Low_complexity 1 22 0 2273 89 0 0 chr2 24284642 24284923 -228971660 - AluSx SINE Alu -31 281 1 181 0 0 65 chr2 24285325 24285356 -228971227 + (TTTTA)n Simple_repeat Simple_repeat 4 32 0 1980 122 3 3 chr2 24285363 24285650 -228970933 - AluSx SINE Alu -25 287 1 1785 121 92 0 chr2 24285652 24285925 -228970658 - AluSx SINE Alu -14 298 1 984 171 52 5 chr2 24285935 24286128 -228970455 - L1MA6 LINE L1 -5 6295 6094 470 217 9 43 chr2 24286188 24286303 -228970280 + L2 LINE L2 3186 3296 -17 459 0 0 0 chr2 24286360 24286411 -228970172 + (TA)n Simple_repeat Simple_repeat 2 52 0 1976 138 7 0 chr2 24286412 24286702 -228969881 - AluSq SINE Alu -16 297 6 2392 104 0 0 chr2 24286905 24287213 -228969370 - AluSx SINE Alu -4 308 1 1730 167 7 27 chr2 24287219 24287381 -228969202 - AluJo SINE Alu -19 293 138 2142 130 3 3 chr2 24287381 24287689 -228968894 - AluSg SINE Alu -2 308 1 1730 167 7 27 chr2 24287689 24287825 -228968758 - AluJo SINE Alu -174 138 1 2199 217 68 48 chr2 24288205 24288956 -228967627 - L1MC5 LINE L1 -37 7924 7159 1107 90 0 0 chr2 24288956 24289100 -228967483 - AluSp/q SINE Alu -10 303 160 1618 174 16 13 chr2 24289100 24289417 -228967166 - L1MB4 LINE L1 -158 6022 5705 1550 148 4 29 chr2 24289418 24289696 -228966887 - L1MB4 LINE L1 -592 5588 5318 1013 144 6 24 chr2 24289703 24289870 -228966713 - AluJb SINE Alu -13 299 136 2368 94 0 0 chr2 24289878 24290177 -228966406 - AluSc SINE Alu -10 299 1 400 286 12 25 chr2 24290203 24290364 -228966219 - L1M4 LINE L1 -6383 159 1 2212 169 9 0 chr2 24290445 24290789 -228965794 - MER7A DNA MER2_type -1 345 1 1661 170 4 0 chr2 24290851 24291110 -228965473 - AluSx SINE Alu -52 260 1 23 0 0 0 chr2 24291115 24291138 -228965445 + AT_rich Low_complexity Low_complexity 1 23 0 1130 216 57 63 chr2 24291144 24291283 -228965300 - L1MC4 LINE L1 -979 7063 6925 2081 117 6 19 chr2 24291283 24291599 -228964984 - AluSx SINE Alu 0 312 1 1130 216 57 63 chr2 24291599 24291810 -228964773 - L1MC4 LINE L1 -1117 6925 6715 1116 209 137 14 chr2 24291830 24292108 -228964475 + MER2 DNA MER2_type 6 317 -28 734 199 0 57 chr2 24292114 24292255 -228964328 - AluJo/FRAM SINE Alu -46 266 134 1761 133 0 4 chr2 24292256 24292497 -228964086 - AluSx SINE Alu -19 293 54 2189 92 3 0 chr2 24292499 24292782 -228963801 + AluSp SINE Alu 1 284 -29 21 0 0 0 chr2 24292789 24292810 -228963773 + AT_rich Low_complexity Low_complexity 1 21 0 830 220 62 0 chr2 24292810 24292987 -228963596 - AluJo SINE Alu -113 199 12 23 33 0 0 chr2 24293493 24293523 -228963060 + AT_rich Low_complexity Low_complexity 1 30 0 566 251 36 18 chr2 24293611 24293778 -228962805 + MIR SINE MIR 10 179 -83 1443 210 48 7 chr2 24293784 24294079 -228962504 - AluJo SINE Alu -5 307 1 2285 109 0 10 chr2 24294156 24294469 -228962114 + AluSx SINE Alu 1 310 -2 2775 179 88 37 chr2 24294477 24294917 -228961666 - MER68 LTR ERV1 0 562 89 2517 62 0 13 chr2 24294917 24295225 -228961358 + AluY SINE Alu 1 304 -7 2775 179 88 37 chr2 24295225 24295319 -228961264 - MER68 LTR ERV1 -473 89 1 783 200 0 7 chr2 24295379 24295529 -228961054 - L1MB8 LINE L1 -6 6172 6024 1731 158 3 10 chr2 24295686 24295977 -228960606 - AluSx SINE Alu -23 289 1 856 101 0 54 chr2 24295980 24296128 -228960455 - L1MB8 LINE L1 -211 5967 5828 2411 98 0 0 chr2 24296139 24296445 -228960138 - AluSq SINE Alu -7 306 1 2396 98 0 0 chr2 24296589 24296895 -228959688 - AluSc SINE Alu -3 306 1 2378 90 0 3 chr2 24296895 24297195 -228959388 - AluSx SINE Alu -13 299 1 563 156 24 102 chr2 24297418 24297564 -228959019 + L1MB1 LINE L1 5172 5305 -841 2344 97 45 87 chr2 24297564 24297644 -228958939 - THE1B LTR MaLR 0 364 282 2300 89 3 16 chr2 24297644 24297958 -228958625 - AluSp SINE Alu -2 311 2 2344 97 45 87 chr2 24297958 24298257 -228958326 - THE1B LTR MaLR -82 282 1 563 156 24 102 chr2 24298257 24298277 -228958306 + L1MB1 LINE L1 5305 5325 -821 1525 90 0 0 chr2 24298285 24298474 -228958109 + AluSg SINE Alu 2 190 -120 425 125 0 50 chr2 24298474 24298554 -228958029 + AluSg SINE Alu 236 311 -1 1746 127 71 56 chr2 24298556 24298896 -228957687 + L1MB1 LINE L1 5335 5679 -655 1676 178 3 23 chr2 24298896 24299200 -228957383 + AluJo SINE Alu 1 298 -14 1344 150 0 31 chr2 24299211 24299266 -228957317 + L1MB1 LINE L1 5758 5813 -355 2340 89 3 0 chr2 24299266 24299559 -228957024 - AluSp SINE Alu -19 294 1 1344 150 0 31 chr2 24299559 24299823 -228956760 + L1MB1 LINE L1 5813 6167 -1 785 200 15 0 chr2 24299912 24300047 -228956536 + AluJb SINE Alu 2 138 -174 1162 133 0 17 chr2 24300057 24300230 -228956353 - AluJo SINE Alu -142 170 1 3194 249 19 8 chr2 24300230 24301078 -228955505 - L1M4 LINE L1 -1959 4187 3331 2297 92 7 0 chr2 24301189 24301484 -228955099 - AluSc SINE Alu -12 297 1 2630 52 3 0 chr2 24301493 24301800 -228954783 - AluY SINE Alu -3 308 1 1648 157 63 20 chr2 24301808 24302107 -228954476 - AluJb SINE Alu 0 312 1 238 103 0 69 chr2 24302141 24302199 -228954384 + (CTACT)n Simple_repeat Simple_repeat 4 57 0 212 130 0 130 chr2 24302252 24302298 -228954285 + L2 LINE L2 3267 3306 -7 472 301 128 9 chr2 24302508 24302734 -228953849 - MIR SINE MIR -8 254 2 736 158 127 70 chr2 24302980 24303138 -228953445 - FAM SINE Alu -4 171 5 872 215 98 5 chr2 24303165 24303370 -228953213 + MIR SINE MIR 1 224 -38 2299 81 10 3 chr2 24303445 24303740 -228952843 + AluY SINE Alu 2 298 -13 2482 91 0 0 chr2 24303932 24304241 -228952342 - AluSc SINE Alu 0 309 1 1340 181 35 86 chr2 24304305 24304443 -228952140 + AluJo SINE Alu 1 144 -168 2026 119 0 0 chr2 24304443 24304711 -228951872 - AluSc SINE Alu -41 268 1 1340 181 35 86 chr2 24304711 24304887 -228951696 + AluJo SINE Alu 144 299 -13 1643 182 26 13 chr2 24305060 24305362 -228951221 + AluJb SINE Alu 1 306 -6 815 178 8 130 chr2 24305386 24305552 -228951031 + MER20 DNA MER1_type 1 129 -90 3572 116 44 31 chr2 24305552 24306070 -228950513 - MER1A DNA MER1_type 0 527 3 815 178 8 130 chr2 24306070 24306150 -228950433 + MER20 DNA MER1_type 129 217 -2 302 197 66 123 chr2 24306519 24306549 -228950034 + Charlie1a DNA MER1_type 49 79 -2682 1710 156 4 7 chr2 24306549 24306825 -228949758 - AluJo SINE Alu -22 290 16 302 197 66 123 chr2 24306825 24306884 -228949699 + Charlie1a DNA MER1_type 79 132 -2629 1811 138 4 4 chr2 24306884 24307145 -228949438 + AluJo SINE Alu 18 278 -34 302 197 66 123 chr2 24307145 24307176 -228949407 + Charlie1a DNA MER1_type 132 163 -1292 1799 186 65 71 chr2 24307177 24307284 -228949299 + Charlie1a DNA MER1_type 112 218 -2543 1036 178 113 14 chr2 24307284 24307497 -228949086 + MER46A DNA MER2_type 3 236 0 1799 186 65 71 chr2 24307497 24307592 -228948991 + Charlie1a DNA MER1_type 218 312 -2449 2359 88 0 0 chr2 24307592 24307888 -228948695 + AluSg SINE Alu 1 296 -14 1799 186 65 71 chr2 24307888 24308098 -228948485 + Charlie1a DNA MER1_type 312 522 -2239 2052 104 4 4 chr2 24308098 24308368 -228948215 - AluSg SINE Alu -40 270 1 2408 90 0 6 chr2 24308377 24308689 -228947894 - AluY SINE Alu -1 310 1 2231 97 10 0 chr2 24308689 24308979 -228947604 - AluSg SINE Alu -17 293 1 1799 186 65 71 chr2 24308979 24309048 -228947535 + Charlie1a DNA MER1_type 528 603 -852 2126 107 10 0 chr2 24309276 24309567 -228947016 + AluSx SINE Alu 1 294 -18 2501 70 0 3 chr2 24309569 24309881 -228946702 + AluY SINE Alu 1 311 0 242 324 86 0 chr2 24310068 24310173 -228946410 - MARNA DNA Mariner -77 509 396 * 764 304 79 22 chr2 24310111 24310479 -228946104 + MARNA DNA Mariner 125 513 -73 2297 107 3 0 chr2 24310657 24310956 -228945627 - AluSx SINE Alu -12 300 1 1888 119 22 53 chr2 24311121 24311439 -228945144 - AluSx SINE Alu -4 308 1 2528 44 0 3 chr2 24311801 24312098 -228944485 - AluY SINE Alu -13 298 3 2192 133 7 0 chr2 24312098 24312406 -228944177 - AluSx SINE Alu -2 310 1 25 31 0 0 chr2 24312617 24312649 -228943934 + AT_rich Low_complexity Low_complexity 1 32 0 1621 153 41 24 chr2 24313304 24313599 -228942984 - AluJo SINE Alu -12 300 1 2107 108 54 0 chr2 24313836 24314132 -228942451 + AluSp SINE Alu 1 312 -1 26 50 0 0 chr2 24314786 24314826 -228941757 + AT_rich Low_complexity Low_complexity 1 40 0 2023 109 10 30 chr2 24315673 24315977 -228940606 + AluSx SINE Alu 1 298 -14 4117 226 90 14 chr2 24316212 24316491 -228940092 - L1MC4 LINE L1 -191 7851 7595 1658 117 78 32 chr2 24316491 24316773 -228939810 + AluSx SINE Alu 1 295 -17 4117 226 90 14 chr2 24316773 24317610 -228938973 - L1MC4 LINE L1 -447 7595 6650 1400 187 97 4 chr2 24317611 24317879 -228938704 - AluJo SINE Alu -19 293 1 2370 166 37 21 chr2 24317881 24318309 -228938274 + MER4E LTR ERV1 343 777 -2 1467 162 29 76 chr2 24318357 24318503 -228938080 + AluJo SINE Alu 1 126 -186 2198 94 11 0 chr2 24318503 24318790 -228937793 + AluSq SINE Alu 1 290 -23 1467 162 29 76 chr2 24318790 24318958 -228937625 + AluJo SINE Alu 126 300 -12 2218 121 0 0 chr2 24319225 24319523 -228937060 - AluSg SINE Alu -10 300 3 2308 88 20 7 chr2 24319546 24319852 -228936731 - AluSg SINE Alu 0 310 1 620 165 55 0 chr2 24319859 24320002 -228936581 - FLAM_C SINE Alu 0 150 2 184 375 0 0 chr2 24320046 24320110 -228936473 - L3 LINE CR1 -7 1570 1507 547 238 156 31 chr2 24320117 24320277 -228936306 + MER5A DNA MER1_type 9 188 -1 22 0 0 0 chr2 24321261 24321283 -228935300 + AT_rich Low_complexity Low_complexity 1 22 0 288 221 168 0 chr2 24321302 24321397 -228935186 + MER103 DNA DNA 6 116 -50 319 283 201 19 chr2 24321662 24321821 -228934762 + MER5A DNA MER1_type 2 189 0 217 270 162 0 chr2 24322334 24322408 -228934175 - L2 LINE L2 -5 3267 3182 734 174 17 0 chr2 24322420 24322559 -228934024 + FLAM_C SINE Alu 1 141 0 1711 166 11 7 chr2 24322591 24322906 -228933677 + AluJo SINE Alu 1 316 0 300 53 0 0 chr2 24323576 24323614 -228932969 + (TGG)n Simple_repeat Simple_repeat 1 38 0 1795 177 3 22 chr2 24324872 24325183 -228931400 + AluJb SINE Alu 1 305 -7 227 290 178 37 chr2 24325413 24325520 -228931063 - L2 LINE L2 0 3272 3151 318 231 111 60 chr2 24325571 24325688 -228930895 + L1ME LINE L1 5541 5637 -484 2129 117 0 13 chr2 24325691 24325991 -228930592 + AluSx SINE Alu 1 296 -16 1048 39 0 0 chr2 24326113 24326242 -228930341 - L1P LINE L1 -3471 2675 2547 15493 30 12 1 chr2 24326242 24328781 -228927802 + L1PA3 LINE L1 3628 6155 0 954 161 8 4 chr2 24328841 24329049 -228927534 + AluJb SINE Alu 2 286 -26 315 267 70 0 chr2 24329054 24329140 -228927443 - L1MC4 LINE L1 -1339 6703 6612 1660 179 19 16 chr2 24329489 24329796 -228926787 - AluJo SINE Alu 0 312 5 2391 86 3 3 chr2 24329810 24330114 -228926469 - AluSp SINE Alu -9 304 1 2075 125 3 0 chr2 24330222 24330510 -228926073 + AluSx SINE Alu 1 289 -23 2201 93 24 0 chr2 24330580 24330870 -228925713 + AluSp SINE Alu 1 297 -16 1895 176 3 3 chr2 24330907 24331219 -228925364 + AluJb SINE Alu 1 312 0 180 77 0 0 chr2 24331231 24331257 -228925326 + (AGGGGG)n Simple_repeat Simple_repeat 5 30 0 2213 116 0 7 chr2 24331335 24331629 -228924954 + AluSx SINE Alu 9 300 -12 994 233 43 16 chr2 24331640 24331849 -228924734 + L1M4 LINE L1 2627 2848 -3298 1732 161 16 48 chr2 24331849 24332165 -228924418 + AluJo SINE Alu 1 306 -6 994 233 43 16 chr2 24332165 24332260 -228924323 + L1M4 LINE L1 2848 2939 -3207 1916 142 0 17 chr2 24332343 24332655 -228923928 + AluSx SINE Alu 1 307 0 2342 89 7 13 chr2 24332988 24333292 -228923291 + AluSx SINE Alu 1 302 -10 834 142 14 7 chr2 24333467 24333608 -228922975 + FRAM SINE Alu 13 154 -22 523 145 161 40 chr2 24333623 24333747 -228922836 + FLAM_C SINE Alu 3 141 -2 236 229 0 0 chr2 24333902 24333950 -228922633 - MER112 DNA MER1_type -183 77 30 338 317 114 46 chr2 24334126 24334192 -228922391 + L1ME3A LINE L1 5461 5521 -649 2394 56 7 13 chr2 24334192 24334494 -228922089 + AluY SINE Alu 1 300 -11 338 317 114 46 chr2 24334494 24334821 -228921762 + L1ME3A LINE L1 5521 5881 -289 244 175 0 0 chr2 24334990 24335030 -228921553 + MER94 DNA DNA 95 134 0 400 211 54 21 chr2 24335104 24335214 -228921369 - FRAM/FAM SINE Alu -93 73 1 2365 88 10 3 chr2 24335218 24335525 -228921058 - AluSg SINE Alu -1 309 1 216 254 91 55 chr2 24336521 24336631 -228919952 + L2 LINE L2 3113 3226 -46 233 211 88 0 chr2 24336663 24336720 -228919863 - MER91C DNA MER1_type -38 102 41 181 245 0 38 chr2 24336736 24336789 -228919794 - L2 LINE L2 -80 3233 3183 195 42 0 0 chr2 24336804 24336828 -228919755 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 733 180 0 8 chr2 24337280 24337408 -228919175 + FLAM_A SINE Alu 1 127 -6 2206 93 40 0 chr2 24337411 24337712 -228918871 + AluSp SINE Alu 1 313 0 1639 185 7 20 chr2 24337719 24338011 -228918572 + AluJo SINE Alu 1 288 -24 207 265 0 0 chr2 24338048 24338116 -228918467 + A-rich Low_complexity Low_complexity 3 70 0 417 261 111 13 chr2 24338481 24338634 -228917949 + MIR SINE MIR 89 256 -6 752 194 0 0 chr2 24338696 24338820 -228917763 + FLAM_C SINE Alu 2 125 -18 1798 160 32 0 chr2 24338906 24339187 -228917396 + AluJb SINE Alu 1 290 -22 2140 130 0 7 chr2 24339195 24339496 -228917087 + AluSq SINE Alu 1 299 -14 2174 118 0 0 chr2 24339503 24339800 -228916783 + AluSx SINE Alu 1 297 -15 187 308 128 0 chr2 24339802 24339880 -228916703 - L2 LINE L2 -18 3295 3208 398 215 0 114 chr2 24340134 24340283 -228916300 - L2 LINE L2 0 3313 3182 1716 182 3 3 chr2 24340557 24340864 -228915719 + AluSx SINE Alu 1 307 -5 26 0 0 0 chr2 24341670 24341696 -228914887 + AT_rich Low_complexity Low_complexity 1 26 0 415 236 9 0 chr2 24342152 24342258 -228914325 + L1MA10 LINE L1 5198 5304 -842 427 120 213 0 chr2 24342275 24342350 -228914233 + FRAM SINE Alu 71 161 -15 4336 156 64 42 chr2 24342375 24343285 -228913298 + L1MA10 LINE L1 5376 6305 -29 2469 43 7 3 chr2 24343534 24343835 -228912748 + AluY SINE Alu 1 302 -9 2149 135 0 0 chr2 24347517 24347875 -228908708 + AluSx SINE Alu 1 358 0 2368 80 0 3 chr2 24347930 24348218 -228908365 + AluSx SINE Alu 14 300 -12 748 148 16 0 chr2 24348632 24348754 -228907829 + FLAM_C SINE Alu 2 125 -18 880 143 0 0 chr2 24348764 24348890 -228907693 - AluJb SINE Alu -30 282 157 799 166 13 38 chr2 24348895 24349052 -228907531 + AluJb SINE Alu 154 306 -6 2325 96 3 3 chr2 24349057 24349359 -228907224 + AluSq SINE Alu 5 306 -7 2215 112 0 0 chr2 24349515 24349809 -228906774 - AluY SINE Alu -15 296 3 503 103 0 0 chr2 24349841 24349909 -228906674 + FLAM SINE Alu 63 130 -13 961 188 102 109 chr2 24350200 24350504 -228906079 + AluJo SINE Alu 1 302 0 1661 141 58 14 chr2 24350508 24350785 -228905798 + AluSg1 SINE Alu 1 289 -20 1789 158 23 16 chr2 24350789 24351093 -228905490 + AluSx SINE Alu 1 306 -6 2307 112 0 0 chr2 24351354 24351658 -228904925 + AluSg SINE Alu 1 304 -6 2133 122 0 29 chr2 24351661 24351972 -228904611 + AluSg SINE Alu 1 302 -8 343 367 100 4 chr2 24352197 24352437 -228904146 + L1MEd LINE L1 459 721 -5398 2152 107 3 3 chr2 24352449 24352740 -228903843 + AluY SINE Alu 3 293 -18 22 0 0 0 chr2 24352740 24352762 -228903821 + AT_rich Low_complexity Low_complexity 1 22 0 2377 103 3 0 chr2 24352848 24353160 -228903423 + AluSp SINE Alu 1 313 0 1122 166 6 0 chr2 24353194 24353375 -228903208 + FRAM SINE Alu 1 176 0 2269 99 17 0 chr2 24353557 24353851 -228902732 + AluSx SINE Alu 1 299 -13 947 159 143 0 chr2 24353869 24354051 -228902532 - MER3 DNA MER1_type -1 208 1 2240 123 0 3 chr2 24354415 24354717 -228901866 + AluSx SINE Alu 1 301 -11 3277 166 25 86 chr2 24354717 24355392 -228901191 + L1MB4 LINE L1 4996 5711 -469 1902 131 7 7 chr2 24355392 24355705 -228900878 + AluSx SINE Alu 2 314 0 3277 166 25 86 chr2 24355705 24356051 -228900532 + L1MB4 LINE L1 5711 5954 -226 727 193 0 15 chr2 24356051 24356186 -228900397 + FLAM_C SINE Alu 1 133 0 3277 166 25 86 chr2 24356186 24356231 -228900352 + L1MB4 LINE L1 5954 6000 -180 491 179 0 21 chr2 24356251 24356346 -228900237 + L1M4 LINE L1 4012 4104 -2042 2309 90 0 0 chr2 24356346 24356634 -228899949 - AluSx SINE Alu -24 288 1 824 168 0 28 chr2 24356640 24356783 -228899800 - FLAM_C SINE Alu -4 139 1 597 141 0 0 chr2 24356787 24356886 -228899697 + L1M4 LINE L1 4103 4201 -1945 1206 180 18 40 chr2 24356886 24357108 -228899475 + AluJo SINE Alu 1 217 -95 2192 169 57 132 chr2 24357146 24357387 -228899196 + L1M4 LINE L1 4258 4516 -1630 2067 136 48 3 chr2 24357387 24357717 -228898866 - MER7A DNA MER2_type -2 344 2 2192 169 57 132 chr2 24357717 24357807 -228898776 + L1M4 LINE L1 4516 4611 -1535 2343 102 0 0 chr2 24357807 24358100 -228898483 + AluSp SINE Alu 1 293 -20 2192 169 57 132 chr2 24358100 24358487 -228898096 + L1M4 LINE L1 4611 4923 -1223 422 174 0 23 chr2 24358720 24358806 -228897777 - MER92B LTR ERV1 -7 629 546 279 186 51 0 chr2 24358810 24358869 -228897714 - MER92B LTR ERV1 -50 586 525 * 1605 198 46 85 chr2 24358865 24359451 -228897132 - MER92B LTR ERV1 -4 632 70 1985 54 8 0 chr2 24359451 24359692 -228896891 + AluSq SINE Alu 1 243 -70 21 36 0 0 chr2 24360057 24360085 -228896498 + AT_rich Low_complexity Low_complexity 1 28 0 205 309 203 8 chr2 24360107 24360230 -228896353 - L2 LINE L2 -5 3267 3121 2088 117 0 23 chr2 24360233 24360542 -228896041 + AluSx SINE Alu 1 302 -10 187 298 110 53 chr2 24360634 24360862 -228895721 - L2 LINE L2 -216 3056 2816 2285 97 17 0 chr2 24360862 24361161 -228895422 - AluSx SINE Alu -8 304 1 2172 91 28 3 chr2 24361410 24361697 -228894886 - AluSg SINE Alu -16 294 1 357 277 208 0 chr2 24361701 24361831 -228894752 - L2 LINE L2 -604 2710 2554 2056 137 3 13 chr2 24361934 24362233 -228894350 - AluSp SINE Alu -17 296 1 25 0 0 0 chr2 24364222 24364247 -228892336 + AT_rich Low_complexity Low_complexity 1 25 0 2031 146 0 19 chr2 24364258 24364574 -228892009 - AluSx SINE Alu -2 310 1 222 37 0 0 chr2 24364586 24364613 -228891970 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1969 131 7 14 chr2 24364615 24364763 -228891820 - AluSx SINE Alu -31 281 134 2080 110 33 10 chr2 24364763 24365063 -228891520 - AluSc SINE Alu -2 307 1 1969 131 7 14 chr2 24365063 24365197 -228891386 - AluSx SINE Alu -178 134 1 1718 193 7 3 chr2 24365330 24365631 -228890952 - AluJo SINE Alu -10 302 1 2251 104 0 10 chr2 24366289 24366597 -228889986 - AluSq SINE Alu -8 305 1 2410 84 3 0 chr2 24366685 24366981 -228889602 - AluSq SINE Alu -2 311 15 379 296 64 0 chr2 24367071 24367196 -228889387 - MIR SINE MIR -74 188 56 2048 108 13 67 chr2 24367388 24367704 -228888879 - AluSx SINE Alu -13 299 1 1850 122 84 3 chr2 24367733 24368020 -228888563 + AluY SINE Alu 2 311 0 2198 125 0 0 chr2 24368035 24368330 -228888253 + AluSx SINE Alu 1 295 -17 496 187 0 0 chr2 24368330 24368421 -228888162 - L1PB4 LINE L1 -5 6151 6061 923 75 8 8 chr2 24368521 24368641 -228887942 - AluY SINE Alu -191 120 1 2365 67 0 20 chr2 24368670 24368970 -228887613 - AluY SINE Alu -17 294 1 1788 219 45 36 chr2 24368980 24369020 -228887563 + Charlie1 DNA MER1_type 1936 1974 -787 2038 152 7 3 chr2 24369020 24369329 -228887254 + AluSx SINE Alu 1 310 -2 1788 219 45 36 chr2 24369329 24369841 -228886742 + Charlie1 DNA MER1_type 1974 2493 -268 763 264 57 24 chr2 24369911 24369961 -228886622 - HAL1 LINE L1 -56 2451 2404 2059 118 45 0 chr2 24369961 24370250 -228886333 - AluSp SINE Alu -11 302 1 763 264 57 24 chr2 24370250 24370533 -228886050 - HAL1 LINE L1 -103 2404 2107 2231 84 99 0 chr2 24370746 24371069 -228885514 - THE1A LTR MaLR 0 355 1 875 137 8 0 chr2 24371073 24371204 -228885379 - FLAM_C SINE Alu -11 132 1 1132 188 144 0 chr2 24371406 24371662 -228884921 + AluJo SINE Alu 2 294 -8 2175 112 7 7 chr2 24371686 24371989 -228884594 + AluSp SINE Alu 5 307 -6 1941 151 14 0 chr2 24372160 24372451 -228884132 - AluSx SINE Alu -17 295 1 368 120 0 0 chr2 24372617 24372667 -228883916 + MER57A LTR ERV1 295 344 -59 2457 67 0 32 chr2 24372686 24373001 -228883582 + AluY SINE Alu 2 306 -5 2144 116 0 3 chr2 24373005 24373299 -228883284 + AluSg SINE Alu 1 293 -17 2226 101 7 7 chr2 24373386 24373682 -228882901 + AluSx SINE Alu 1 296 -16 286 289 0 30 chr2 24373684 24373819 -228882764 - L1ME4a LINE L1 -80 6041 5911 1603 178 0 8 chr2 24373935 24374194 -228882389 - AluJo SINE Alu -55 257 1 683 171 48 115 chr2 24374257 24374509 -228882074 - L1MB7 LINE L1 -5 6179 5945 2400 152 38 22 chr2 24374539 24374937 -228881646 - L1ME4a LINE L1 -448 5736 5322 2100 121 4 0 chr2 24374937 24375250 -228881333 - AluSx SINE Alu 0 314 1 2400 152 38 22 chr2 24375250 24375379 -228881204 - L1ME4a LINE L1 -862 5322 5197 1663 171 19 47 chr2 24375510 24375831 -228880752 + AluJo SINE Alu 1 312 0 2130 111 21 0 chr2 24375935 24376223 -228880360 + AluJb SINE Alu 1 294 -18 1178 95 24 86 chr2 24376241 24376403 -228880180 + MER30 DNA MER1_type 1 149 -81 2425 63 0 27 chr2 24376403 24376704 -228879879 + AluY SINE Alu 3 295 -16 1178 95 24 86 chr2 24376704 24376751 -228879832 + MER30 DNA MER1_type 149 197 -33 808 132 66 0 chr2 24376841 24376962 -228879621 + FLAM_C SINE Alu 5 133 -10 2481 74 0 3 chr2 24377547 24377844 -228878739 + AluSp SINE Alu 1 296 -17 2282 112 0 0 chr2 24378004 24378299 -228878284 - AluSx SINE Alu -17 295 1 28 48 0 0 chr2 24378912 24378954 -228877629 + AT_rich Low_complexity Low_complexity 1 42 0 1446 170 3 113 chr2 24379232 24379561 -228877022 - AluJo SINE Alu -9 293 1 2167 117 0 10 chr2 24379566 24379875 -228876708 - AluSx SINE Alu -6 306 1 462 97 0 0 chr2 24379926 24379988 -228876595 - Alu SINE Alu -15 297 236 1614 172 46 14 chr2 24380037 24380322 -228876261 + AluJb SINE Alu 1 294 -18 2459 52 0 7 chr2 24380350 24380667 -228875916 + AluY SINE Alu 1 315 0 23 54 0 0 chr2 24380737 24380774 -228875809 + AT_rich Low_complexity Low_complexity 1 37 0 311 194 78 10 chr2 24380822 24380925 -228875658 - L1ME4a LINE L1 -48 6073 5964 2357 92 10 0 chr2 24380937 24381231 -228875352 - AluSx SINE Alu -15 297 1 914 162 0 103 chr2 24381248 24381433 -228875150 + AluJb SINE Alu 134 299 -13 24 32 0 0 chr2 24381482 24381513 -228875070 + AT_rich Low_complexity Low_complexity 1 31 0 2511 72 0 0 chr2 24381820 24382124 -228874459 + AluY SINE Alu 1 304 -7 2228 129 0 3 chr2 24382165 24382474 -228874109 + AluSg SINE Alu 1 308 -2 1773 242 121 4 chr2 24382475 24383038 -228873545 - L1MC4 LINE L1 -142 7900 7272 180 0 0 0 chr2 24383068 24383088 -228873495 + (ATTG)n Simple_repeat Simple_repeat 2 21 0 1069 278 125 3 chr2 24383101 24383446 -228873137 - L1MC4 LINE L1 -985 7057 6671 551 93 52 10 chr2 24383457 24383554 -228873029 + L1 LINE L1 3589 3689 -2457 186 43 0 0 chr2 24383570 24383593 -228872990 + (TG)n Simple_repeat Simple_repeat 2 24 0 712 139 0 6 chr2 24383622 24383862 -228872721 - AluJb SINE Alu -7 305 15 266 132 0 8 chr2 24383963 24384148 -228872435 - AluJb SINE Alu -66 236 1 489 257 29 40 chr2 24384155 24384216 -228872367 - L1MC4 LINE L1 -1414 6628 6568 1825 155 0 7 chr2 24384216 24384506 -228872077 + AluJb SINE Alu 1 288 -24 489 257 29 40 chr2 24384506 24384620 -228871963 - L1MC4 LINE L1 -1474 6568 6443 2076 105 0 23 chr2 24385080 24385384 -228871199 + AluSx SINE Alu 1 297 -15 394 216 108 0 chr2 24385391 24385502 -228871081 + L1ME3A LINE L1 5827 5949 -221 478 266 35 6 chr2 24385720 24385889 -228870694 - L1MCa LINE L1 -3558 2868 2695 316 179 107 24 chr2 24385891 24385975 -228870608 - MER34C LTR ERV1 0 585 495 28 0 0 26 chr2 24385983 24386002 -228870581 + AT_rich Low_complexity Low_complexity 1 19 -19 237 65 0 0 chr2 24386002 24386033 -228870550 + (CA)n Simple_repeat Simple_repeat 2 32 0 28 0 0 26 chr2 24386033 24386052 -228870531 + AT_rich Low_complexity Low_complexity 19 38 0 1995 124 3 13 chr2 24386052 24386367 -228870216 - AluSx SINE Alu 0 312 1 184 29 29 29 chr2 24386369 24386403 -228870180 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1417 103 9 60 chr2 24386403 24386563 -228870020 - AluSg/x SINE Alu -27 285 139 2322 80 0 0 chr2 24386563 24386865 -228869718 - AluSc SINE Alu -7 302 1 1417 103 9 60 chr2 24386865 24386937 -228869646 - AluSg/x SINE Alu -173 139 65 818 204 38 80 chr2 24386937 24387201 -228869382 - MER39 LTR ERV1 -188 519 267 240 238 37 32 chr2 24387177 24387279 -228869304 - MER39 LTR ERV1 -538 106 6 * 636 239 32 40 chr2 24387284 24387531 -228869052 - L1MCa LINE L1 -3730 2696 2452 22 0 0 0 chr2 24388000 24388022 -228868561 + AT_rich Low_complexity Low_complexity 1 22 0 238 139 0 0 chr2 24388042 24388078 -228868505 - Alu SINE Alu -266 36 1 1945 120 16 13 chr2 24388270 24388579 -228868004 - AluSg SINE Alu 0 310 1 431 267 120 45 chr2 24388602 24389230 -228867353 - L1MCa LINE L1 -4564 1862 1129 238 210 16 32 chr2 24389851 24389913 -228866670 - L1MCa LINE L1 -5855 561 501 343 150 100 25 chr2 24389972 24390034 -228866549 - Tigger5 DNA MER2_type -1 2322 2251 2229 57 0 7 chr2 24390034 24390316 -228866267 + AluY SINE Alu 30 309 -2 343 150 100 25 chr2 24390316 24390333 -228866250 - Tigger5 DNA MER2_type -72 2251 2237 23 33 0 0 chr2 24390479 24390509 -228866074 + AT_rich Low_complexity Low_complexity 1 30 0 1098 139 0 17 chr2 24390622 24390802 -228865781 - AluSg/x SINE Alu -2 310 134 2108 116 3 3 chr2 24390802 24391103 -228865480 - AluSx SINE Alu -11 301 1 2334 91 7 0 chr2 24391200 24391509 -228865074 - AluSq SINE Alu 0 313 3 1727 142 35 10 chr2 24391511 24391821 -228864762 - 7SLRNA srpRNA srpRNA -1 319 2 801 158 0 0 chr2 24391826 24391946 -228864637 - FLAM_C SINE Alu -11 132 13 305 267 46 53 chr2 24391946 24392077 -228864506 - L1M4 LINE L1 -2879 3267 3138 2117 79 14 4 chr2 24392175 24392482 -228864101 - AluSc SINE Alu 0 310 1 2208 110 3 0 chr2 24392547 24392848 -228863735 - AluSq SINE Alu -11 302 1 343 276 151 5 chr2 24392977 24393169 -228863414 - L2 LINE L2 -5 3308 3089 2032 114 3 7 chr2 24393174 24393473 -228863110 + AluSx SINE Alu 1 298 -14 640 194 16 23 chr2 24393473 24393602 -228862981 - AluSg/x SINE Alu -19 291 164 502 194 83 0 chr2 24393862 24393970 -228862613 + HsTC2 DNA Tc2 2 118 -1780 657 199 107 0 chr2 24394176 24394307 -228862276 + FRAM SINE Alu 2 146 -30 1910 129 0 0 chr2 24394998 24395311 -228861272 + AluSc SINE Alu 1 313 0 725 175 0 8 chr2 24395319 24395439 -228861144 + FLAM_C SINE Alu 2 120 -23 26 30 0 0 chr2 24395439 24395472 -228861111 + AT_rich Low_complexity Low_complexity 1 33 0 2119 111 7 0 chr2 24395720 24396026 -228860557 - AluSp SINE Alu -5 308 1 48 0 0 0 chr2 24396365 24396413 -228860170 + AT_rich Low_complexity Low_complexity 1 48 0 2024 96 7 10 chr2 24396414 24396706 -228859877 + AluSc SINE Alu 1 291 -18 866 134 15 0 chr2 24396729 24396863 -228859720 + AluJb SINE Alu 1 136 -176 1884 136 0 0 chr2 24396863 24397135 -228859448 + AluSx SINE Alu 7 278 -34 1999 110 10 0 chr2 24397151 24397443 -228859140 - AluSq SINE Alu -18 295 1 1201 198 87 7 chr2 24397443 24397731 -228858852 - Charlie1b DNA MER1_type -208 315 5 375 269 85 21 chr2 24397754 24397895 -228858688 - MER5B DNA MER1_type 0 178 29 180 0 0 0 chr2 24398458 24398478 -228858105 + (A)n Simple_repeat Simple_repeat 1 20 0 2250 90 0 3 chr2 24399107 24399407 -228857176 + AluSc SINE Alu 1 299 -10 1008 162 131 22 chr2 24400125 24400347 -228856236 + 7SLRNA srpRNA srpRNA 11 256 -64 2228 110 0 0 chr2 24400369 24400678 -228855905 + AluSg SINE Alu 1 309 -1 2310 87 0 3 chr2 24400940 24401240 -228855343 - AluSq SINE Alu -14 299 1 679 203 0 8 chr2 24401396 24401529 -228855054 + FLAM_C SINE Alu 2 133 0 908 240 110 16 chr2 24401732 24401978 -228854605 - MLT1J LTR MaLR 0 511 243 3702 160 113 57 chr2 24401991 24402065 -228854518 - L1MB8 LINE L1 -1 6177 6109 1954 90 42 3 chr2 24402065 24402353 -228854230 + AluSx SINE Alu 9 307 -5 3702 160 113 57 chr2 24402353 24403343 -228853240 - L1MB8 LINE L1 -69 6109 5043 1188 102 0 0 chr2 24403355 24403521 -228853062 - AluSg/x SINE Alu -8 304 139 3862 155 45 31 chr2 24403592 24404310 -228852273 - MER50 LTR ERV1 0 734 7 344 215 41 50 chr2 24404312 24404433 -228852150 - MLT1J LTR MaLR -286 225 106 848 161 7 7 chr2 24405728 24405877 -228850706 - MER5A DNA MER1_type -27 162 14 2396 81 0 0 chr2 24405936 24406245 -228850338 + AluSx SINE Alu 1 309 -3 824 161 67 0 chr2 24407233 24407382 -228849201 - AluJo SINE Alu -33 279 121 21 0 0 0 chr2 24407382 24407403 -228849180 + AT_rich Low_complexity Low_complexity 1 21 0 653 135 31 0 chr2 24407410 24407506 -228849077 - U6 snRNA snRNA -5 102 4 787 181 0 21 chr2 24407506 24407650 -228848933 - AluJo SINE Alu -168 144 4 325 98 0 33 chr2 24407651 24407712 -228848871 + (TTCC)n Simple_repeat Simple_repeat 4 62 0 2224 96 3 0 chr2 24407723 24408024 -228848559 - AluSx SINE Alu -10 302 1 292 336 52 0 chr2 24408071 24408205 -228848378 + L2 LINE L2 2431 2571 -743 216 0 0 0 chr2 24408502 24408526 -228848057 + (T)n Simple_repeat Simple_repeat 1 24 0 1861 114 11 0 chr2 24408785 24409049 -228847534 + AluSx SINE Alu 9 275 -37 302 327 30 35 chr2 24409574 24409773 -228846810 - L2 LINE L2 -1334 1980 1783 1543 169 19 50 chr2 24412141 24412461 -228844122 - AluJb SINE Alu -2 310 1 2013 128 3 6 chr2 24412471 24412783 -228843800 - AluSx SINE Alu -1 311 1 375 252 43 142 chr2 24412812 24413114 -228843469 - L1MC4a LINE L1 -1756 6052 5781 1210 65 126 75 chr2 24413116 24413167 -228843416 + MER30 DNA MER1_type 6 53 -177 2193 89 0 38 chr2 24413167 24413309 -228843274 + AluSx SINE Alu 1 147 -165 2139 106 3 7 chr2 24413309 24413612 -228842971 + AluSg SINE Alu 1 302 -8 2193 89 0 38 chr2 24413612 24413785 -228842798 + AluSx SINE Alu 147 304 -8 1210 65 126 75 chr2 24413785 24413947 -228842636 + MER30 DNA MER1_type 53 230 0 242 291 36 45 chr2 24413948 24414058 -228842525 - L1MC4a LINE L1 -372 5798 5690 476 266 25 14 chr2 24414626 24414791 -228841792 + MIR SINE MIR 33 198 -64 354 283 114 33 chr2 24414792 24414976 -228841607 + L2 LINE L2 2278 2476 -838 876 262 97 83 chr2 24414977 24415083 -228841500 + L2 LINE L2 2597 2700 -572 1677 139 12 0 chr2 24415083 24415342 -228841241 + AluSx SINE Alu 7 268 -44 180 0 0 0 chr2 24415350 24415370 -228841213 + (TAAA)n Simple_repeat Simple_repeat 4 23 0 876 262 97 83 chr2 24415370 24415440 -228841143 + L2 LINE L2 2706 2774 -498 261 0 0 0 chr2 24415440 24415469 -228841114 + (TG)n Simple_repeat Simple_repeat 2 30 0 207 0 0 0 chr2 24415469 24415492 -228841091 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 876 262 97 83 chr2 24415492 24415956 -228840627 + L2 LINE L2 2773 3272 0 755 142 0 71 chr2 24416661 24416802 -228839781 - FLAM_C SINE Alu -2 131 1 1893 139 0 7 chr2 24416810 24417112 -228839471 - AluSx SINE Alu -10 302 3 2306 77 3 3 chr2 24417115 24417415 -228839168 - AluSp SINE Alu -13 300 1 2164 94 0 13 chr2 24417443 24417606 -228838977 - AluSp SINE Alu -17 296 137 2475 53 3 0 chr2 24417606 24417910 -228838673 - AluY SINE Alu -6 305 1 2164 94 0 13 chr2 24417910 24418044 -228838539 - AluSp SINE Alu -176 137 3 2155 73 0 17 chr2 24418284 24418572 -228838011 - AluSq SINE Alu -7 306 24 2183 110 0 3 chr2 24418811 24419110 -228837473 - AluSx SINE Alu -14 298 1 2017 142 3 0 chr2 24419121 24419432 -228837151 - AluSp SINE Alu -1 312 1 832 258 79 47 chr2 24419789 24420066 -228836517 - L1MC4 LINE L1 0 8042 7775 2198 101 0 10 chr2 24420066 24420372 -228836211 + AluSq SINE Alu 1 303 -10 832 258 79 47 chr2 24420372 24420628 -228835955 - L1MC4 LINE L1 -267 7775 7492 1990 120 17 0 chr2 24422845 24423136 -228833447 + AluSx SINE Alu 2 297 -15 533 295 46 50 chr2 24423454 24423735 -228832848 - L1ME LINE L1 -346 5775 5496 1142 184 0 5 chr2 24423742 24423943 -228832640 - AluJo SINE Alu -112 200 1 1975 108 14 0 chr2 24424058 24424378 -228832205 - AluSc SINE Alu 0 324 1 24 0 0 0 chr2 24424378 24424402 -228832181 + AT_rich Low_complexity Low_complexity 1 24 0 815 136 0 23 chr2 24424402 24424534 -228832049 - FLAM_C SINE Alu -14 129 1 29 0 0 0 chr2 24424543 24424572 -228832011 + AT_rich Low_complexity Low_complexity 1 29 0 550 257 128 16 chr2 24424715 24424964 -228831619 - L1MC4a LINE L1 -1736 6072 5796 357 218 115 109 chr2 24424964 24425129 -228831454 - L1ME4a LINE L1 0 6121 5956 36 40 0 0 chr2 24425140 24425190 -228831393 + AT_rich Low_complexity Low_complexity 1 50 0 24 32 0 0 chr2 24425238 24425269 -228831314 + AT_rich Low_complexity Low_complexity 1 31 0 1787 156 0 7 chr2 24425292 24425593 -228830990 + AluJb SINE Alu 1 299 -13 1908 81 4 0 chr2 24425774 24426021 -228830562 - AluSx SINE Alu -64 248 1 570 168 0 10 chr2 24426256 24426357 -228830226 - FLAM_C SINE Alu -11 132 33 1615 189 3 0 chr2 24426403 24426700 -228829883 - AluSx SINE Alu -14 298 1 1426 180 0 53 chr2 24427477 24427630 -228828953 - AluJo SINE Alu -28 284 124 207 0 0 0 chr2 24427630 24427653 -228828930 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1660 118 59 7 chr2 24427653 24427925 -228828658 - AluSx SINE Alu -26 286 1 1426 180 0 53 chr2 24427925 24428070 -228828513 - AluJo SINE Alu -186 126 1 325 269 104 30 chr2 24428070 24428204 -228828379 - L2 LINE L2 -10 3303 3160 2330 75 0 7 chr2 24428309 24428615 -228827968 - AluSc SINE Alu -5 304 1 666 110 0 0 chr2 24431116 24431207 -228825376 - AluSg/x SINE Alu -150 162 72 2035 112 3 0 chr2 24431360 24431669 -228824914 - AluSx SINE Alu 0 310 1 710 269 41 62 chr2 24431731 24431754 -228824829 - L1M4 LINE L1 -2281 3865 3843 2053 105 10 0 chr2 24431754 24432050 -228824533 - AluSg SINE Alu -11 299 1 710 269 41 62 chr2 24432050 24432199 -228824384 - L1M4 LINE L1 -2303 3843 3692 1711 160 3 10 chr2 24432199 24432499 -228824084 - AluJo SINE Alu -14 298 1 710 269 41 62 chr2 24432499 24432685 -228823898 - L1M4 LINE L1 -2454 3692 3504 2366 62 0 0 chr2 24432685 24433006 -228823577 - AluY SINE Alu -33 278 1 24 0 0 0 chr2 24433015 24433039 -228823544 + AT_rich Low_complexity Low_complexity 1 24 0 710 269 41 62 chr2 24433039 24433060 -228823523 - L1M4 LINE L1 -2650 3496 3459 2138 243 87 65 chr2 24433087 24433881 -228822702 - MER21B LTR ERV1 -52 811 1 533 170 11 0 chr2 24434057 24434151 -228822432 + FLAM_A SINE Alu 1 95 -47 1739 51 69 5 chr2 24434151 24434368 -228822215 + AluY SINE Alu 1 231 -80 295 320 21 0 chr2 24435138 24435235 -228821348 - L2 LINE L2 -21 3251 3153 406 299 113 31 chr2 24435337 24435789 -228820794 - L2 LINE L2 -838 2476 1988 263 319 121 21 chr2 24438780 24438921 -228817662 - L2 LINE L2 -3 3269 3115 2299 115 0 6 chr2 24438962 24439276 -228817307 + AluSx SINE Alu 1 312 0 1872 149 0 24 chr2 24439293 24439582 -228817001 + AluJb SINE Alu 1 282 -30 808 270 83 12 chr2 24439736 24439977 -228816606 + MER45C DNA AcHobo 16 273 -680 242 301 84 0 chr2 24440739 24440882 -228815701 - L1ME LINE L1 -207 5914 5760 183 162 0 0 chr2 24442060 24442097 -228814486 + T-rich Low_complexity Low_complexity 1 37 0 2281 77 3 7 chr2 24442111 24442397 -228814186 + AluSx SINE Alu 18 302 -10 827 124 0 0 chr2 24442407 24442512 -228814071 - FLAM_C SINE Alu -26 117 13 1394 102 0 66 chr2 24443071 24443297 -228813286 + AluJo SINE Alu 94 304 -8 209 178 0 82 chr2 24443538 24443611 -228812972 + (CCCCG)n Simple_repeat Simple_repeat 5 71 0 2448 85 0 0 chr2 24444968 24445261 -228811322 + AluSg SINE Alu 9 301 -9 251 195 273 0 chr2 24445456 24445533 -228811050 - L2 LINE L2 -3 3310 3213 380 323 37 12 chr2 24445549 24445713 -228810870 + L2 LINE L2 2924 3091 -181 1164 257 214 24 chr2 24445747 24446591 -228809992 + L2 LINE L2 2174 3218 -95 1577 186 13 39 chr2 24446591 24446897 -228809686 + AluJb SINE Alu 1 298 -14 1164 257 214 24 chr2 24446897 24447000 -228809583 + L2 LINE L2 3218 3300 -13 198 0 0 0 chr2 24447001 24447023 -228809560 + (TTTTG)n Simple_repeat Simple_repeat 5 26 0 1793 162 0 55 chr2 24447026 24447335 -228809248 - AluJo SINE Alu -20 292 1 251 271 14 0 chr2 24447457 24447527 -228809056 + L2 LINE L2 3200 3270 -2 2497 235 67 54 chr2 24448902 24449101 -228807482 - L1ME3A LINE L1 -14 6156 5961 1882 137 22 26 chr2 24449101 24449414 -228807169 - AluJb SINE Alu 0 312 1 2497 235 67 54 chr2 24449414 24449888 -228806695 - L1ME3A LINE L1 -209 5961 5495 2320 107 16 0 chr2 24449888 24450196 -228806387 - AluSq SINE Alu 0 313 1 2497 235 67 54 chr2 24450196 24450249 -228806334 - L1ME3A LINE L1 -675 5495 5444 1725 96 5 0 chr2 24450249 24450468 -228806115 - AluSg/x SINE Alu -10 302 83 2497 235 67 54 chr2 24450468 24450590 -228805993 - L1ME3A LINE L1 -726 5444 5325 2257 130 0 0 chr2 24450590 24450897 -228805686 - AluSq SINE Alu -6 307 1 2497 235 67 54 chr2 24450897 24451085 -228805498 - L1ME3A LINE L1 -845 5325 5141 1795 152 0 70 chr2 24451085 24451269 -228805314 - AluJo SINE Alu -6 306 153 2347 100 3 0 chr2 24451269 24451579 -228805004 - AluSp SINE Alu -2 311 1 1795 152 0 70 chr2 24451579 24451723 -228804860 - AluJo SINE Alu -159 153 1 2497 235 67 54 chr2 24451723 24451821 -228804762 - L1ME3A LINE L1 -1029 5141 5046 2396 92 0 13 chr2 24451821 24452126 -228804457 + AluSx SINE Alu 1 301 -11 2497 235 67 54 chr2 24452126 24452387 -228804196 - L1ME3A LINE L1 -1124 5046 4822 311 311 0 0 chr2 24452510 24452600 -228803983 + (TG)n Simple_repeat Simple_repeat 2 91 0 379 293 26 0 chr2 24452925 24453041 -228803542 - MIR3 SINE MIR -50 158 40 2336 101 3 7 chr2 24453518 24453825 -228802758 + AluSx SINE Alu 1 306 -6 665 292 161 32 chr2 24453874 24454175 -228802408 - L2 LINE L2 -453 2861 2600 2099 146 0 3 chr2 24454175 24454498 -228802085 + AluSx SINE Alu 1 312 0 665 292 161 32 chr2 24454498 24454669 -228801914 - L2 LINE L2 -714 2600 2328 1951 140 44 0 chr2 24455089 24455382 -228801201 + AluSx SINE Alu 1 306 -6 479 184 72 121 chr2 24455469 24455676 -228800907 - L1MC4a LINE L1 -6 7802 7606 2107 89 41 7 chr2 24455774 24456065 -228800518 - AluY SINE Alu -10 301 1 2346 101 0 19 chr2 24456067 24456383 -228800200 - AluSx SINE Alu 0 312 3 907 141 0 15 chr2 24456385 24456520 -228800063 - AluSq/x SINE Alu -180 133 1 1595 120 127 15 chr2 24457752 24458033 -228798550 - AluSg1 SINE Alu 0 309 1 2537 91 0 0 chr2 24458590 24458897 -228797686 - AluY SINE Alu -4 307 1 32 26 0 0 chr2 24458961 24459000 -228797583 + AT_rich Low_complexity Low_complexity 1 39 0 647 169 25 25 chr2 24459000 24459118 -228797465 - FLAM_C SINE Alu -15 118 1 227 235 118 35 chr2 24461224 24461309 -228795274 + MIR SINE MIR 114 205 -57 2458 45 7 3 chr2 24461882 24462169 -228794414 - AluY SINE Alu -23 288 1 2189 154 0 0 chr2 24462741 24463053 -228793530 - AluSx SINE Alu 0 312 1 1039 102 0 0 chr2 24464190 24464318 -228792265 - AluSx SINE Alu -152 160 33 200 261 123 0 chr2 24464508 24464533 -228792050 - L2 LINE L2 -22 3250 3229 645 172 0 17 chr2 24464533 24464649 -228791934 - MER81 DNA DNA 0 114 1 200 261 123 0 chr2 24464649 24464688 -228791895 - L2 LINE L2 -43 3229 3178 701 276 55 57 chr2 24464763 24464901 -228791682 - L2 LINE L2 -22 3291 3154 2378 101 0 0 chr2 24464901 24465197 -228791386 - AluSg SINE Alu -14 296 1 701 276 55 57 chr2 24465197 24465229 -228791354 - L2 LINE L2 -159 3154 3123 2357 99 0 0 chr2 24465229 24465523 -228791060 + AluSq SINE Alu 1 294 -19 701 276 55 57 chr2 24465523 24465717 -228790866 - L2 LINE L2 -190 3123 2927 2003 141 6 16 chr2 24465879 24466192 -228790391 - AluSx SINE Alu -2 310 1 221 247 142 13 chr2 24466510 24466622 -228789961 - MIR SINE MIR -66 142 17 198 364 121 0 chr2 24466650 24466749 -228789834 - MIR SINE MIR -64 144 34 313 157 0 0 chr2 24466749 24466800 -228789783 - AluSg SINE Alu -187 113 63 28 0 0 0 chr2 24467153 24467181 -228789402 + AT_rich Low_complexity Low_complexity 1 28 0 988 144 7 13 chr2 24468283 24468436 -228788147 + AluJo SINE Alu 1 152 -160 206 325 38 12 chr2 24468495 24468575 -228788008 + L2 LINE L2 1352 1433 -1881 552 303 122 18 chr2 24468616 24468753 -228787830 + L2 LINE L2 1574 1695 -1619 2335 106 0 0 chr2 24468753 24469045 -228787538 + AluSx SINE Alu 1 292 -20 552 303 122 18 chr2 24469045 24469250 -228787333 + L2 LINE L2 1695 1952 -1362 992 182 0 28 chr2 24469253 24469434 -228787149 - FRAM SINE Alu 0 40 1 460 142 132 28 chr2 24469530 24469636 -228786947 + L2 LINE L2 3189 3305 -8 200 286 7 65 chr2 24470718 24470872 -228785711 + (CGGGG)n Simple_repeat Simple_repeat 5 149 0 552 258 52 99 chr2 24471825 24472190 -228784393 + MER34 LTR ERV1 1 348 -194 957 161 301 0 chr2 24472217 24472410 -228784173 + AluJo SINE Alu 58 308 -4 255 246 18 0 chr2 24472414 24472471 -228784112 + MER34 LTR ERV1 446 503 -39 1055 141 18 6 chr2 24472785 24472955 -228783628 - FAM SINE Alu -3 172 1 2330 106 7 0 chr2 24473981 24474283 -228782300 + AluSx SINE Alu 1 304 -8 2425 82 0 23 chr2 24475597 24475901 -228780682 - AluY SINE Alu -14 297 1 1877 151 42 3 chr2 24475906 24476190 -228780393 - AluJb SINE Alu -17 295 1 342 287 0 11 chr2 24477243 24477337 -228779246 - MIR3 SINE MIR -3 205 113 182 361 0 0 chr2 24477438 24477510 -228779073 - MER5A DNA MER1_type 0 189 118 461 258 39 16 chr2 24477666 24477794 -228778789 + MIR SINE MIR 17 147 -115 594 75 0 0 chr2 24478247 24478327 -228778256 + (CAGGG)n Simple_repeat Simple_repeat 1 80 0 791 185 0 0 chr2 24479264 24479394 -228777189 - MER20 DNA MER1_type -1 218 89 2226 120 42 3 chr2 24479408 24479765 -228776818 + MER31A LTR ERV1 115 485 0 323 337 88 50 chr2 24479766 24479860 -228776723 + HAL1 LINE L1 1144 1233 -1274 2759 23 0 0 chr2 24479860 24480159 -228776424 + AluY SINE Alu 1 299 -12 323 337 88 50 chr2 24480159 24480325 -228776258 + HAL1 LINE L1 1233 1414 -1093 281 185 15 0 chr2 24480380 24480445 -228776138 + CT-rich Low_complexity Low_complexity 3 68 0 921 137 0 0 chr2 24480447 24480571 -228776012 - FLAM_C SINE Alu -18 125 2 248 274 36 24 chr2 24481067 24481151 -228775432 + MER21B LTR ERV1 12 96 -767 675 194 8 22 chr2 24481152 24481286 -228775297 - FLAM_C SINE Alu -1 132 1 1515 236 95 104 chr2 24481312 24481514 -228775069 + MER21B LTR ERV1 39 241 -582 2055 141 0 10 chr2 24481514 24481684 -228774899 - AluSx SINE Alu -9 303 136 1373 113 204 57 chr2 24481684 24481949 -228774634 - AluSx SINE Alu -8 304 1 2055 141 0 10 chr2 24481949 24482084 -228774499 - AluSx SINE Alu -176 136 1 1515 236 95 104 chr2 24482084 24482268 -228774315 + MER21B LTR ERV1 241 425 -398 2176 121 0 0 chr2 24482268 24482557 -228774026 - AluSx SINE Alu -23 289 1 1515 236 95 104 chr2 24482557 24482893 -228773690 + MER21B LTR ERV1 425 819 -4 1275 134 0 0 chr2 24482973 24483144 -228773439 + AluSq SINE Alu 1 171 -142 226 236 0 0 chr2 24483623 24483678 -228772905 + MLT1I LTR MaLR 329 383 -26 1281 92 52 0 chr2 24483724 24483898 -228772685 + AluSp SINE Alu 125 307 -6 2455 63 17 0 chr2 24483899 24484199 -228772384 + AluY SINE Alu 2 306 -5 1852 115 77 11 chr2 24484211 24484497 -228772086 + AluSx SINE Alu 6 310 -2 327 273 13 13 chr2 24484536 24484690 -228771893 + L1ME LINE L1 3830 3983 -2163 1010 161 18 78 chr2 24484706 24484923 -228771660 - AluJb SINE Alu -23 289 86 2370 51 41 0 chr2 24485069 24485364 -228771219 + AluY SINE Alu 2 308 -3 495 293 41 53 chr2 24485444 24485856 -228770727 + L1ME LINE L1 4288 4704 -1442 1821 157 51 7 chr2 24485856 24486150 -228770433 + AluJb SINE Alu 1 307 -5 495 293 41 53 chr2 24486150 24486199 -228770384 + L1ME LINE L1 4704 4745 -1401 2136 126 7 3 chr2 24486199 24486508 -228770075 + AluSx SINE Alu 1 310 -2 495 293 41 53 chr2 24486508 24486536 -228770047 + L1ME LINE L1 4745 4772 -1374 367 287 37 38 chr2 24486542 24486710 -228769873 + L1ME LINE L1 5634 5799 -341 387 0 0 0 chr2 24486831 24486874 -228769709 + (CA)n Simple_repeat Simple_repeat 1 43 0 4842 67 0 7 chr2 24487043 24487527 -228769056 - L1PA8 LINE L1 -3 6169 5688 2113 108 3 14 chr2 24487527 24487823 -228768760 - AluSg SINE Alu -17 293 1 4842 67 0 7 chr2 24487823 24487933 -228768650 - L1PA8 LINE L1 -484 5688 5579 1724 149 3 97 chr2 24487936 24488278 -228768305 - AluJo SINE Alu -2 310 1 461 180 62 123 chr2 24488279 24488409 -228768174 - Charlie2a DNA MER1_type -63 2799 2663 1578 207 7 0 chr2 24488409 24488689 -228767894 - AluJo SINE Alu -30 282 1 461 180 62 123 chr2 24488689 24488717 -228767866 - Charlie2a DNA MER1_type -199 2663 2635 1799 131 0 11 chr2 24488717 24488977 -228767606 + AluSx SINE Alu 1 257 -55 461 180 62 123 chr2 24488977 24489061 -228767522 - Charlie2a DNA MER1_type -227 2635 2571 38825 81 11 8 chr2 24489064 24495165 -228761418 + L1PA6 LINE L1 27 6137 -17 4029 179 93 35 chr2 24495165 24495579 -228761004 - Charlie2a DNA MER1_type -272 2590 2202 2199 123 0 0 chr2 24495579 24495888 -228760695 - AluY SINE Alu -2 309 1 4029 179 93 35 chr2 24495888 24496362 -228760221 - Charlie2a DNA MER1_type -660 2202 1628 2201 136 0 0 chr2 24496362 24496671 -228759912 + AluSx SINE Alu 1 309 -3 4029 179 93 35 chr2 24496671 24496840 -228759743 - Charlie2a DNA MER1_type -1234 1628 1470 479 274 34 0 chr2 24496910 24497027 -228759556 - Charlie2b DNA MER1_type -2131 651 531 579 266 79 39 chr2 24497042 24497347 -228759236 - Charlie2b DNA MER1_type -2545 317 1 471 326 23 31 chr2 24497861 24498214 -228758369 + L1PA15 LINE L1 1 350 -7231 11329 180 168 18 chr2 24499263 24500220 -228756363 + L1PA15 LINE L1 2319 3132 -4471 2281 114 7 0 chr2 24500220 24500526 -228756057 - AluSq SINE Alu -5 308 1 11329 180 168 18 chr2 24500526 24502201 -228754382 + L1PA15 LINE L1 3132 4556 -3047 207 0 0 0 chr2 24502201 24502224 -228754359 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 11329 180 168 18 chr2 24502224 24502526 -228754057 + L1PA15 LINE L1 4556 4812 -2791 2462 86 0 0 chr2 24502526 24502829 -228753754 + AluY SINE Alu 1 303 -8 11329 180 168 18 chr2 24502829 24504235 -228752348 + L1PA15 LINE L1 4812 7477 -126 1765 223 84 62 chr2 24504264 24504848 -228751735 + MER21B LTR ERV1 131 727 -136 1941 161 7 0 chr2 24504974 24505265 -228751318 - AluJo SINE Alu -19 293 1 536 246 204 9 chr2 24505846 24506175 -228750408 + L1ME4a LINE L1 5593 5985 -136 2213 112 0 3 chr2 24506203 24506508 -228750075 - AluSq SINE Alu -9 304 1 401 321 132 59 chr2 24506709 24507064 -228749519 + L2 LINE L2 2847 3227 -45 197 216 0 0 chr2 24507069 24507106 -228749477 - L2 LINE L2 -50 3263 3227 1843 182 10 0 chr2 24507197 24507499 -228749084 + AluJo SINE Alu 1 305 -7 2165 125 0 0 chr2 24507501 24507806 -228748777 + AluSq SINE Alu 1 305 -8 183 42 0 0 chr2 24507870 24507894 -228748689 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 2762 258 62 36 chr2 24508133 24508944 -228747639 - HERVL40 LTR ERVL -848 4682 3851 1303 238 31 10 chr2 24508949 24509239 -228747344 - LTR40c LTR ERVL -169 296 1 669 220 33 33 chr2 24509587 24509737 -228746846 - L2 LINE L2 0 3272 3123 2119 132 0 0 chr2 24509953 24510249 -228746334 + AluY SINE Alu 1 296 -15 795 176 0 0 chr2 24510277 24510396 -228746187 - FLAM_A SINE Alu -13 120 2 2085 114 3 69 chr2 24510479 24510813 -228745770 + AluSx SINE Alu 1 312 0 2090 125 3 3 chr2 24510921 24511216 -228745367 - AluSx SINE Alu -11 301 7 2178 139 0 0 chr2 24511339 24511649 -228744934 - AluSx SINE Alu -2 310 1 253 190 17 0 chr2 24511654 24511712 -228744871 + L1ME4a LINE L1 6062 6120 -1 320 314 51 8 chr2 24512343 24512461 -228744122 - L2 LINE L2 0 3313 3191 228 315 67 34 chr2 24512645 24512734 -228743849 + L2 LINE L2 3168 3259 -13 213 39 0 0 chr2 24512734 24512760 -228743823 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 329 253 25 13 chr2 24513370 24513449 -228743134 + MLT1K LTR MaLR 509 588 0 2244 92 3 0 chr2 24513893 24514218 -228742365 + AluSq SINE Alu 1 326 0 360 264 73 27 chr2 24514240 24514350 -228742233 + MIR SINE MIR 30 144 -118 2003 84 80 28 chr2 24514457 24514743 -228741840 - AluSq SINE Alu -12 301 1 1750 150 43 37 chr2 24515230 24515512 -228741071 + MER58B DNA MER1_type 1 287 -2133 2182 110 147 21 chr2 24515512 24515893 -228740690 + MSTB1 LTR MaLR 1 429 -3 1750 150 43 37 chr2 24515893 24515937 -228740646 + MER58B DNA MER1_type 287 329 -12 2180 110 21 0 chr2 24515956 24516247 -228740336 + AluSq SINE Alu 1 297 -16 22 103 0 0 chr2 24517588 24517666 -228738917 + GC_rich Low_complexity Low_complexity 1 78 0 581 183 174 9 chr2 24518443 24518673 -228737910 - L1MEc LINE L1 -2956 3259 2992 993 198 33 33 chr2 24518696 24518908 -228737675 - AluJo SINE Alu -100 212 1 3277 186 28 93 chr2 24518951 24519006 -228737577 - L1ME1 LINE L1 -5 6161 6104 1674 162 3 24 chr2 24519006 24519296 -228737287 + AluJo SINE Alu 6 289 -23 3277 186 28 93 chr2 24519296 24519469 -228737114 - L1ME1 LINE L1 -62 6104 5921 2037 123 37 7 chr2 24519469 24519769 -228736814 - AluSx SINE Alu -3 309 1 3277 186 28 93 chr2 24519769 24520473 -228736110 - L1ME1 LINE L1 -245 5921 5289 2704 240 96 100 chr2 24520457 24520482 -228736101 - L1MEc LINE L1 -4995 1401 1377 * 3507 139 20 85 chr2 24520482 24520519 -228736064 - L1MB7 LINE L1 -18 6166 6128 2288 64 3 54 chr2 24520519 24520832 -228735751 - AluY SINE Alu -14 297 1 3507 139 20 85 chr2 24520832 24521497 -228735086 - L1MB7 LINE L1 -56 6128 5510 2704 240 96 100 chr2 24521497 24521572 -228735011 - L1MEc LINE L1 -5019 1377 1303 2038 145 3 0 chr2 24521572 24521869 -228734714 - AluSx SINE Alu -14 298 1 2704 240 96 100 chr2 24521869 24522139 -228734444 - L1MEc LINE L1 -5093 1303 1034 870 150 0 15 chr2 24522139 24522295 -228734288 - FLAM_C SINE Alu 0 133 1 2704 240 96 100 chr2 24522295 24523292 -228733291 - L1MEc LINE L1 -5362 1034 37 * 2818 230 59 61 chr2 24523286 24523709 -228732874 - L1ME LINE L1 -4984 1086 664 13746 110 10 28 chr2 24523709 24526526 -228730057 - L1PA8 LINE L1 0 6172 3382 2818 230 59 61 chr2 24526526 24527177 -228729406 - L1ME LINE L1 -5406 664 81 863 211 11 58 chr2 24527651 24527841 -228728742 + AluJo SINE Alu 125 305 -7 1995 141 3 10 chr2 24528575 24528879 -228727704 + AluSx SINE Alu 1 302 -10 1914 149 0 32 chr2 24529957 24530142 -228726441 - AluJb SINE Alu -1 311 139 2052 123 10 14 chr2 24530142 24530434 -228726149 - AluSx SINE Alu -21 291 1 1914 149 0 32 chr2 24530434 24530564 -228726019 - AluJb SINE Alu -173 139 6 3190 133 39 44 chr2 24530672 24531265 -228725318 - L1MB4 LINE L1 -15 6165 5576 813 247 0 0 chr2 24531397 24531563 -228725020 - FRAM SINE Alu 0 166 1 1974 131 7 7 chr2 24532256 24532539 -228724044 - AluSg SINE Alu -27 283 1 2436 83 3 0 chr2 24534872 24535184 -228721399 - AluSq SINE Alu 0 313 1 430 144 44 11 chr2 24536378 24536468 -228720115 - AluJ/FLAM SINE Alu -219 93 1 1613 204 14 0 chr2 24536522 24536806 -228719777 + AluJb SINE Alu 1 288 -24 632 158 190 6 chr2 24536822 24536980 -228719603 - MER44D DNA MER2_type -134 475 19 2214 228 161 12 chr2 24537126 24538229 -228718354 - L1ME3 LINE L1 -8 6154 4901 377 277 71 0 chr2 24538239 24538351 -228718232 + FLAM_A SINE Alu 1 120 -13 2219 118 7 3 chr2 24538357 24538662 -228717921 - AluSx SINE Alu -6 306 1 21 36 0 0 chr2 24538687 24538715 -228717868 + AT_rich Low_complexity Low_complexity 1 28 0 363 50 125 6 chr2 24539707 24539867 -228716716 + (TA)n Simple_repeat Simple_repeat 1 179 0 * 593 54 27 65 chr2 24539845 24540031 -228716552 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 2206 98 3 0 chr2 24540039 24540324 -228716259 - AluSp SINE Alu -27 286 1 2255 110 10 0 chr2 24540374 24540674 -228715909 - AluSx SINE Alu -9 303 1 537 265 48 58 chr2 24541280 24541341 -228715242 + L1MC4a LINE L1 5313 5373 -2435 1870 116 56 7 chr2 24541341 24541510 -228715073 - AluSg SINE Alu -11 299 109 195 42 0 0 chr2 24541510 24541534 -228715049 + (TG)n Simple_repeat Simple_repeat 2 25 0 1870 116 56 7 chr2 24541534 24541649 -228714934 - AluSg SINE Alu -201 109 1 2308 98 0 3 chr2 24541649 24541946 -228714637 - AluSq SINE Alu -17 296 1 537 265 48 58 chr2 24541946 24542174 -228714409 + L1MC4a LINE L1 5371 5600 -2208 2257 102 3 0 chr2 24542188 24542482 -228714101 + AluSx SINE Alu 1 295 -17 2116 117 3 0 chr2 24542634 24542924 -228713659 + AluSg SINE Alu 1 291 -19 312 250 105 0 chr2 24542933 24543057 -228713526 + L1MC4a LINE L1 5817 5953 -1855 297 219 0 0 chr2 24543170 24543243 -228713340 + (TATG)n Simple_repeat Simple_repeat 2 74 0 188 0 74 0 chr2 24543344 24543371 -228713212 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 25 0 0 0 chr2 24544193 24544218 -228712365 + AT_rich Low_complexity Low_complexity 1 25 0 194 324 69 20 chr2 24545381 24545483 -228711100 + MIR SINE MIR 153 259 -3 187 309 56 16 chr2 24545522 24545648 -228710935 - L3 LINE CR1 -808 769 639 2649 49 0 0 chr2 24546427 24546732 -228709851 + AluY SINE Alu 1 305 -6 1827 156 0 17 chr2 24547381 24547683 -228708900 + AluJb SINE Alu 1 297 -15 1382 202 63 25 chr2 24548003 24548370 -228708213 + MER119 DNA MER1_type 149 529 -54 2127 125 0 0 chr2 24548564 24548893 -228707690 + AluSx SINE Alu 1 329 0 496 332 110 12 chr2 24548905 24549224 -228707359 + L1M4 LINE L1 3850 4199 -1947 632 228 27 0 chr2 24549226 24549375 -228707208 - MLT1J2 LTR MaLR -227 223 71 205 286 79 0 chr2 24549712 24549775 -228706808 - MIR SINE MIR -13 249 182 440 239 301 23 chr2 24550234 24550410 -228706173 + MIR SINE MIR 24 248 -14 577 174 67 49 chr2 24550630 24550854 -228705729 - L1MC5 LINE L1 -125 7836 7609 1212 187 92 75 chr2 24550906 24551518 -228705065 - L1MC5 LINE L1 -450 7511 6821 180 0 0 0 chr2 24551742 24551762 -228704821 + (A)n Simple_repeat Simple_repeat 1 20 0 2249 121 0 0 chr2 24551919 24552224 -228704359 - AluSg SINE Alu -5 305 1 240 100 0 0 chr2 24552784 24552824 -228703759 + (A)n Simple_repeat Simple_repeat 1 40 0 359 191 217 35 chr2 24552932 24553047 -228703536 - L2 LINE L2 -3 3310 3175 1666 226 76 51 chr2 24553741 24554503 -228702080 + L1M4 LINE L1 2461 3241 -2905 1188 158 6 0 chr2 24554542 24554725 -228701858 - AluSg/x SINE Alu -9 303 120 579 122 52 0 chr2 24554725 24554840 -228701743 + MER58 DNA MER1_type 93 213 -128 972 176 49 15 chr2 24554845 24555049 -228701534 + MER58B DNA MER1_type 130 340 -1 396 191 11 11 chr2 24555603 24555692 -228700891 - Charlie1 DNA MER1_type 0 2761 2673 1952 279 65 73 chr2 24555840 24556596 -228699987 - L1MEc LINE L1 -4842 1554 813 2529 77 0 0 chr2 24556596 24556907 -228699676 - AluY SINE Alu 0 311 1 1952 279 65 73 chr2 24556907 24557666 -228698917 - L1MEc LINE L1 -5583 813 50 826 282 56 11 chr2 24558512 24558870 -228697713 - HsTC2 DNA Tc2 -1043 855 482 2401 80 0 3 chr2 24559706 24560006 -228696577 - AluSq SINE Alu -14 299 1 1758 112 98 0 chr2 24560012 24560289 -228696294 - AluY SINE Alu -7 304 1 191 314 0 0 chr2 24561086 24561137 -228695446 + L3 LINE CR1 1512 1562 -15 1950 225 50 41 chr2 24561327 24561910 -228694673 - L1ME3A LINE L1 -26 6144 5557 2010 99 0 87 chr2 24561933 24562255 -228694328 - AluSx SINE Alu -2 310 17 2335 83 0 3 chr2 24563068 24563369 -228693214 + AluSq SINE Alu 3 302 -11 202 329 105 22 chr2 24563599 24563827 -228692756 - L2 LINE L2 -1154 2160 1914 216 162 0 0 chr2 24564102 24564139 -228692444 + (TGAA)n Simple_repeat Simple_repeat 2 38 0 193 333 42 0 chr2 24564595 24564667 -228691916 - L3 LINE CR1 -98 1479 1405 5018 213 64 51 chr2 24565505 24567137 -228689446 - L1MDa LINE L1 -4691 1849 196 * 6958 160 36 10 chr2 24567115 24569162 -228687421 + L1M2 LINE L1 3681 5804 -496 2217 88 0 14 chr2 24569265 24569562 -228687021 + AluY SINE Alu 1 293 -18 382 197 123 33 chr2 24569592 24569714 -228686869 - L1MEd LINE L1 -2473 3656 3524 1782 166 89 111 chr2 24570013 24570106 -228686477 - L1MD3 LINE L1 -1 7994 7900 1871 108 56 0 chr2 24570106 24570426 -228686157 - AluY SINE Alu 0 335 1 1782 166 89 111 chr2 24570426 24570951 -228685632 - L1MD3 LINE L1 -95 7900 7389 230 197 79 92 chr2 24570953 24571029 -228685554 - MLT1F1 LTR MaLR -456 111 37 411 172 0 11 chr2 24571030 24571123 -228685460 - L1MC3 LINE L1 -687 7098 7007 432 229 134 55 chr2 24571267 24571333 -228685250 - L1MEd LINE L1 -2873 3256 3197 962 145 23 23 chr2 24571333 24571505 -228685078 + FAM SINE Alu 1 172 -3 432 229 134 55 chr2 24571505 24571892 -228684691 - L1MEd LINE L1 -2932 3197 2767 281 279 59 76 chr2 24571911 24571981 -228684602 - L1MEd LINE L1 -5012 1107 1037 2171 91 16 56 chr2 24571981 24572300 -228684283 - AluY SINE Alu -5 306 1 281 279 59 76 chr2 24572300 24572753 -228683830 - L1MEd LINE L1 -5082 1037 593 3819 156 16 0 chr2 24572811 24573447 -228683136 - L1PA16 LINE L1 -7 6159 5514 12447 145 29 8 chr2 24573447 24575740 -228680843 - L1PA15-16 LINE L1 -3658 3191 850 1720 177 0 49 chr2 24576061 24576389 -228680194 - AluJb SINE Alu 0 312 1 433 246 79 28 chr2 24576452 24576616 -228679967 + MER5A DNA MER1_type 7 189 0 771 279 52 22 chr2 24576737 24576966 -228679617 - MIR SINE MIR -26 236 1 269 350 97 13 chr2 24577094 24577320 -228679263 + MIR SINE MIR 2 246 -16 351 269 43 21 chr2 24577461 24577554 -228679029 - L2 LINE L2 -22 3291 3197 1905 173 0 0 chr2 24578055 24578339 -228678244 - AluJb SINE Alu -23 289 6 27 0 0 0 chr2 24578638 24578665 -228677918 + AT_rich Low_complexity Low_complexity 1 27 0 659 153 90 0 chr2 24579154 24579265 -228677318 - 5S rRNA rRNA 0 121 1 22 0 0 0 chr2 24579382 24579404 -228677179 + AT_rich Low_complexity Low_complexity 1 22 0 35 24 0 0 chr2 24579800 24579842 -228676741 + AT_rich Low_complexity Low_complexity 1 42 0 6690 151 123 54 chr2 24580086 24581539 -228675044 - MER52A LTR ERV1 0 1755 204 276 221 234 0 chr2 24581540 24581617 -228674966 - MER52A LTR ERV1 -1660 95 1 2065 115 31 7 chr2 24582284 24582570 -228674013 - AluSx SINE Alu -19 293 1 1122 174 8 26 chr2 24584179 24584431 -228672152 + MER52A LTR ERV1 903 1114 -164 11896 116 35 6 chr2 24584432 24586521 -228670062 + Tigger1 DNA MER2_type 250 2417 -1 51 42 0 0 chr2 24586843 24586915 -228669668 + AT_rich Low_complexity Low_complexity 1 72 0 1737 168 0 0 chr2 24587041 24587321 -228669262 + AluJb SINE Alu 2 281 -31 2198 121 3 13 chr2 24587605 24587920 -228668663 + AluSx SINE Alu 1 312 0 1553 210 17 17 chr2 24588026 24588326 -228668257 + AluJo SINE Alu 1 300 -12 1975 133 0 13 chr2 24589037 24589345 -228667238 + AluJb SINE Alu 4 307 -5 2128 79 7 17 chr2 24589523 24589815 -228666768 + AluSq SINE Alu 14 302 -11 2451 74 0 3 chr2 24590204 24590503 -228666080 - AluSq SINE Alu -15 298 1 339 304 133 57 chr2 24590612 24591139 -228665444 - L2 LINE L2 -820 2494 1928 394 231 93 9 chr2 24591173 24591281 -228665302 + MLT1J LTR MaLR 395 511 0 22 35 0 0 chr2 24591730 24591759 -228664824 + AT_rich Low_complexity Low_complexity 1 29 0 224 286 86 0 chr2 24592701 24592771 -228663812 - L2 LINE L2 -8 3264 3189 1516 168 68 91 chr2 24592773 24593226 -228663357 - MSTB2 LTR MaLR 0 457 15 212 276 9 67 chr2 24593348 24593453 -228663130 - L2 LINE L2 -183 3089 2991 919 322 89 39 chr2 24593479 24594166 -228662417 - L2 LINE L2 -452 2862 2142 1733 180 17 3 chr2 24594207 24594502 -228662081 + AluJo SINE Alu 1 299 -13 3084 186 26 6 chr2 24594553 24595209 -228661374 + L1MC3 LINE L1 6371 7039 -746 227 175 0 150 chr2 24595256 24595336 -228661247 + MLT1F1 LTR MaLR 35 102 -465 198 344 38 15 chr2 24595336 24595467 -228661116 - L2 LINE L2 -1323 1991 1858 2147 109 14 0 chr2 24595550 24595835 -228660748 - AluSx SINE Alu -23 289 1 408 169 0 28 chr2 24595896 24595967 -228660616 + AluJ/FRAM SINE Alu 228 296 -16 616 237 80 22 chr2 24596420 24596811 -228659772 - MLT1H1 LTR MaLR -66 489 32 238 319 0 0 chr2 24597264 24597336 -228659247 + L1MC/D LINE L1 5564 5635 -2173 2330 99 0 3 chr2 24597453 24597755 -228658828 + AluY SINE Alu 1 301 -10 2079 125 62 28 chr2 24597838 24598190 -228658393 - THE1B LTR MaLR 0 364 1 9701 102 24 9 chr2 24598190 24599322 -228657261 - THE1B-int LTR MaLR 0 1580 420 2274 88 0 14 chr2 24599322 24599616 -228656967 - AluY SINE Alu -21 290 1 9701 102 24 9 chr2 24599616 24599924 -228656659 - THE1B-int LTR MaLR -1160 420 118 607 197 0 48 chr2 24600514 24600661 -228655922 + L1PA16 LINE L1 6027 6166 0 2022 160 26 50 chr2 24601171 24601271 -228655312 + MLT2D LTR ERVL 6 107 -307 2928 52 0 0 chr2 24601271 24601635 -228654948 + L1PA5 LINE L1 5790 6153 -1 2022 160 26 50 chr2 24601635 24601893 -228654690 + MLT2D LTR ERVL 107 355 -59 201 39 0 0 chr2 24601893 24601919 -228654664 + (CCCCAG)n Simple_repeat Simple_repeat 1 26 0 2022 160 26 50 chr2 24601919 24601978 -228654605 + MLT2D LTR ERVL 355 414 0 213 264 209 0 chr2 24602049 24602140 -228654443 - L2 LINE L2 0 3313 3204 214 162 0 0 chr2 24603333 24603370 -228653213 + L2 LINE L2 3236 3272 0 21 57 0 0 chr2 24604172 24604207 -228652376 + AT_rich Low_complexity Low_complexity 1 35 0 441 276 51 39 chr2 24605638 24605794 -228650789 + MIR3 SINE MIR 26 183 -25 234 0 0 0 chr2 24606812 24606838 -228649745 + (A)n Simple_repeat Simple_repeat 1 26 0 406 244 207 6 chr2 24607311 24607475 -228649108 - L2 LINE L2 0 3313 3117 31 26 0 0 chr2 24607607 24607645 -228648938 + AT_rich Low_complexity Low_complexity 1 38 0 223 315 46 54 chr2 24607659 24607789 -228648794 - L2 LINE L2 -256 3016 2888 530 226 48 30 chr2 24607896 24608064 -228648519 - MIR SINE MIR 0 262 92 659 280 43 14 chr2 24608391 24608602 -228647981 - L2 LINE L2 -6 3307 3091 372 88 0 0 chr2 24609729 24609786 -228646797 + (CA)n Simple_repeat Simple_repeat 1 57 0 1365 222 33 0 chr2 24611043 24611318 -228645265 + AluJo SINE Alu 3 286 -26 180 0 0 0 chr2 24611318 24611338 -228645245 + (GGGGA)n Simple_repeat Simple_repeat 4 23 0 341 333 85 0 chr2 24611497 24611638 -228644945 + MER5A DNA MER1_type 37 189 0 328 292 96 88 chr2 24611646 24611906 -228644677 + HAL1 LINE L1 816 1077 -1430 287 296 20 0 chr2 24611954 24612052 -228644531 + L1ME LINE L1 22 121 -5949 899 160 169 46 chr2 24612663 24612882 -228643701 + AluSq SINE Alu 1 246 -67 616 225 0 8 chr2 24612883 24613040 -228643543 + AluJb SINE Alu 154 309 0 344 174 14 0 chr2 24613045 24613114 -228643469 - AluSc SINE Alu -98 201 132 2237 97 0 3 chr2 24613114 24613424 -228643159 - AluSx SINE Alu -3 309 1 319 236 199 29 chr2 24613424 24613665 -228642918 + L1M4 LINE L1 4565 4846 -1300 23 68 0 0 chr2 24613762 24613806 -228642777 + AT_rich Low_complexity Low_complexity 1 44 0 232 326 84 22 chr2 24614417 24614595 -228641988 + MIR SINE MIR 57 245 -17 1354 127 47 4 chr2 24615237 24615490 -228641093 - L1MA5 LINE L1 -10 6290 6027 1449 217 40 25 chr2 24615758 24616205 -228640378 - pTR5 LTR ERV1 -1242 1196 743 1871 133 46 0 chr2 24616580 24616865 -228639718 + AluSx SINE Alu 1 298 -14 1766 120 31 22 chr2 24616867 24617184 -228639399 + L1PA15 LINE L1 5825 6144 -21 21 0 0 0 chr2 24617185 24617206 -228639377 + AT_rich Low_complexity Low_complexity 1 21 0 307 261 22 22 chr2 24617504 24617596 -228638987 - MIR SINE MIR 0 262 171 1839 169 3 7 chr2 24617677 24617984 -228638599 - AluJb SINE Alu -6 306 1 236 128 85 0 chr2 24618085 24618132 -228638451 + MER77 LTR ERV1 161 211 -394 228 161 71 18 chr2 24618111 24618167 -228638416 + MER21B LTR ERV1 140 198 -665 * 508 95 0 0 chr2 24618169 24618243 -228638340 + SVA Other Other 530 603 -783 822 248 101 51 chr2 24618362 24618847 -228637736 + MER77 LTR ERV1 196 670 -4 477 204 32 0 chr2 24618884 24618977 -228637606 - MIR SINE MIR -122 140 45 3199 147 76 21 chr2 24618997 24619577 -228637006 - LTR9 LTR ERV1 0 612 1 365 131 0 159 chr2 24619615 24619722 -228636861 + L1MA8 LINE L1 6197 6286 -5 2432 88 0 0 chr2 24619889 24620196 -228636387 - AluSc SINE Alu 0 309 3 562 283 11 60 chr2 24620354 24620538 -228636045 - MER5B DNA MER1_type -2 176 2 41 36 0 0 chr2 24620811 24620866 -228635717 + AT_rich Low_complexity Low_complexity 1 55 0 1975 172 0 6 chr2 24621044 24621358 -228635225 + AluJb SINE Alu 1 312 0 1043 299 77 21 chr2 24621438 24622050 -228634533 - L1ME3A LINE L1 -226 5944 5299 260 162 29 0 chr2 24622598 24622666 -228633917 + L1M4 LINE L1 4618 4687 -1459 2325 92 3 0 chr2 24622666 24622959 -228633624 - AluSq SINE Alu -19 294 1 1260 149 0 39 chr2 24623147 24623375 -228633208 - AluJo SINE Alu 0 305 86 224 258 88 44 chr2 24623604 24623763 -228632820 - MIR3 SINE MIR -42 166 1 239 216 0 0 chr2 24623861 24623912 -228632671 + G-rich Low_complexity Low_complexity 4 54 0 23 54 0 0 chr2 24623989 24624026 -228632557 + GC_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr2 24624064 24624085 -228632498 + GC_rich Low_complexity Low_complexity 1 21 0 197 56 0 56 chr2 24624103 24624139 -228632444 + (CGGG)n Simple_repeat Simple_repeat 3 36 0 201 74 0 0 chr2 24624178 24624205 -228632378 + (CGG)n Simple_repeat Simple_repeat 2 28 0 337 302 126 39 chr2 24624359 24624644 -228631939 - L1M2 LINE L1 -5932 917 608 28 61 0 0 chr2 24624866 24624915 -228631668 + GC_rich Low_complexity Low_complexity 1 49 0 342 274 158 21 chr2 24628654 24628844 -228627739 + MIR SINE MIR 18 233 -29 280 308 115 0 chr2 24628948 24629078 -228627505 + MIR3 SINE MIR 55 199 -9 243 302 42 21 chr2 24629600 24629696 -228626887 - MIR3 SINE MIR -8 200 103 292 172 0 35 chr2 24629951 24630009 -228626574 - L2 LINE L2 -2 3311 3256 377 302 10 0 chr2 24630021 24630117 -228626466 - MIR SINE MIR -120 142 46 2266 90 14 0 chr2 24630333 24630622 -228625961 + AluSg SINE Alu 1 293 -17 330 223 82 100 chr2 24630660 24630880 -228625703 - L1MCa LINE L1 -4893 1533 1318 308 340 21 37 chr2 24631183 24631374 -228625209 - L2 LINE L2 -2 3311 3124 2474 80 3 0 chr2 24633035 24633346 -228623237 - AluSp SINE Alu -1 312 1 2850 222 50 49 chr2 24633488 24634545 -228622038 + Charlie7 DNA MER1_type 1482 2539 -73 277 402 25 10 chr2 24635453 24635763 -228620820 + L2 LINE L2 2719 3032 -240 2270 103 3 3 chr2 24636672 24636973 -228619610 - AluSx SINE Alu -11 301 1 23 0 0 0 chr2 24637518 24637541 -228619042 + AT_rich Low_complexity Low_complexity 1 23 0 2197 106 26 0 chr2 24638115 24638417 -228618166 - AluSp SINE Alu -3 310 1 609 266 75 111 chr2 24638570 24639104 -228617479 + MLT1K LTR MaLR 74 588 0 189 0 0 0 chr2 24639116 24639137 -228617446 + (CAT)n Simple_repeat Simple_repeat 1 21 0 756 227 84 30 chr2 24639780 24639983 -228616600 + MIR SINE MIR 17 230 -32 944 127 6 6 chr2 24640022 24640180 -228616403 - L1MA4 LINE L1 0 6300 6143 737 158 137 93 chr2 24641140 24641462 -228615121 - L1MC5 LINE L1 -419 7542 7207 542 313 114 9 chr2 24641703 24641930 -228614653 - MIR SINE MIR -11 251 1 2204 94 14 3 chr2 24642637 24642924 -228613659 - AluSq SINE Alu -23 290 1 1613 151 17 48 chr2 24642928 24643220 -228613363 - AluJo SINE Alu -20 292 10 2298 148 22 0 chr2 24643420 24643791 -228612792 - L1MB7 LINE L1 -16 6168 5790 1964 182 111 5 chr2 24643792 24644494 -228612089 - L1MB7 LINE L1 -446 5734 4939 291 316 10 10 chr2 24645032 24645130 -228611453 - L3 LINE CR1 -151 1426 1329 257 352 98 26 chr2 24645130 24645323 -228611260 - L3 LINE CR1 -460 1117 911 182 333 98 8 chr2 24645406 24645538 -228611045 + MIR SINE MIR 60 203 -59 270 202 146 22 chr2 24645695 24645784 -228610799 - L1MC4 LINE L1 -10 8032 7933 393 250 83 13 chr2 24645987 24646143 -228610440 - L1ME LINE L1 -341 5821 5655 202 298 0 0 chr2 24646164 24646211 -228610372 + (TG)n Simple_repeat Simple_repeat 2 48 0 2500 78 7 0 chr2 24646584 24646893 -228609690 + AluY SINE Alu 1 311 0 21 57 0 0 chr2 24647029 24647064 -228609519 + AT_rich Low_complexity Low_complexity 1 35 0 1484 164 106 4 chr2 24647098 24647372 -228609211 + AluJb SINE Alu 1 302 -10 400 246 72 14 chr2 24648062 24648200 -228608383 - L1ME LINE L1 -458 5663 5518 813 273 26 18 chr2 24648268 24648495 -228608088 + MIR SINE MIR 5 233 -29 2124 183 137 2 chr2 24648529 24648967 -228607616 + LTR65 LTR ERV1 1 497 -172 2314 109 0 0 chr2 24649239 24649542 -228607041 - AluSx SINE Alu -9 303 1 276 211 18 0 chr2 24650033 24650090 -228606493 - L1MC/D LINE L1 -2056 5752 5695 422 250 42 0 chr2 24650420 24650540 -228606043 - L1ME4a LINE L1 -21 6100 5976 2322 85 2 139 chr2 24650569 24650980 -228605603 - THE1A LTR MaLR 0 355 1 10794 85 7 1 chr2 24650980 24652375 -228604208 - THE1A-int LTR MaLR 0 1580 178 460 243 114 21 chr2 24653310 24653450 -228603133 - L2 LINE L2 -3 3310 3158 351 281 0 0 chr2 24654079 24654161 -228602422 - MIR3 SINE MIR -51 157 76 2396 104 0 0 chr2 24654465 24654774 -228601809 + AluSx SINE Alu 1 309 -3 4814 131 34 1 chr2 24654792 24655487 -228601096 + L1PA13 LINE L1 5408 6130 -33 2413 55 0 3 chr2 24655487 24655778 -228600805 + AluY SINE Alu 3 292 -19 4814 131 34 1 chr2 24655778 24655814 -228600769 + L1PA13 LINE L1 6130 6163 0 310 80 20 0 chr2 24655815 24655865 -228600718 + L1PA13 LINE L1 6112 6162 -1 1979 139 43 23 chr2 24655958 24656260 -228600323 + AluSx SINE Alu 1 308 -4 384 281 114 9 chr2 24656372 24656486 -228600097 + L2 LINE L2 3147 3272 0 2270 119 0 0 chr2 24657722 24658032 -228598551 - AluSq SINE Alu -2 311 2 2337 69 0 7 chr2 24658535 24658823 -228597760 - AluSq SINE Alu -14 299 14 1753 116 98 0 chr2 24658838 24659115 -228597468 - AluY SINE Alu -7 304 1 2962 234 54 50 chr2 24660153 24660759 -228595824 - L1ME3A LINE L1 -26 6144 5542 1898 101 0 85 chr2 24660759 24661065 -228595518 - AluSx SINE Alu -2 310 31 1455 136 72 4 chr2 24661065 24661298 -228595285 - AluYb8 SINE Alu -67 251 1 2962 234 54 50 chr2 24661298 24661712 -228594871 - L1ME3A LINE L1 -627 5543 5121 1509 142 51 70 chr2 24661715 24662031 -228594552 - AluJo SINE Alu -2 310 1 386 245 48 53 chr2 24662107 24662295 -228594288 + HAL1 LINE L1 1994 2180 -327 2876 130 82 13 chr2 24662731 24663208 -228593375 - L1PA16 LINE L1 0 6166 5657 2342 81 3 0 chr2 24663259 24663557 -228593026 + AluSp SINE Alu 1 299 -14 805 172 240 30 chr2 24663638 24663871 -228592712 - MLT1J1 LTR MaLR -163 283 2 316 224 204 0 chr2 24663872 24663970 -228592613 + L2 LINE L2 3194 3311 -2 * 367 311 40 13 chr2 24663966 24664117 -228592466 + MIR SINE MIR 6 160 -102 1404 164 5 5 chr2 24664197 24664417 -228592166 + AluJo SINE Alu 1 220 -92 29 0 0 0 chr2 24664448 24664477 -228592106 + AT_rich Low_complexity Low_complexity 1 29 0 2438 42 0 11 chr2 24664615 24664924 -228591659 - AluY SINE Alu 0 306 1 208 430 39 12 chr2 24666030 24666286 -228590297 - L2 LINE L2 -622 2692 2430 260 270 110 10 chr2 24666341 24666441 -228590142 + MIR SINE MIR 88 197 -65 198 0 0 0 chr2 24666661 24666683 -228589900 + (CAA)n Simple_repeat Simple_repeat 3 24 0 1874 87 21 0 chr2 24666707 24666949 -228589634 - L1PA13 LINE L1 -394 5767 5521 2741 98 8 0 chr2 24666949 24667313 -228589270 + L1PA13 LINE L1 5792 6160 -3 304 121 273 30 chr2 24669065 24669131 -228587452 - MER112 DNA MER1_type -6 254 173 252 0 0 0 chr2 24669179 24669207 -228587376 + (CA)n Simple_repeat Simple_repeat 2 29 0 317 221 15 0 chr2 24669207 24669275 -228587308 - MER112 DNA MER1_type -190 70 2 1074 182 4 74 chr2 24669328 24669496 -228587087 - AluJo SINE Alu -11 301 152 2208 122 0 0 chr2 24669496 24669792 -228586791 - AluSx SINE Alu -16 296 1 1074 182 4 74 chr2 24669792 24669854 -228586729 - AluJo SINE Alu -160 152 87 23 33 0 0 chr2 24669898 24669928 -228586655 + AT_rich Low_complexity Low_complexity 1 30 0 1892 124 0 0 chr2 24669944 24670193 -228586390 + AluSx SINE Alu 42 290 -22 189 107 0 0 chr2 24670193 24670221 -228586362 + (TA)n Simple_repeat Simple_repeat 2 29 0 24 53 0 0 chr2 24670235 24670273 -228586310 + AT_rich Low_complexity Low_complexity 1 38 0 2577 72 0 0 chr2 24670611 24670916 -228585667 + AluY SINE Alu 1 305 -6 2066 125 0 20 chr2 24671188 24671492 -228585091 + AluSx SINE Alu 1 298 -14 446 247 294 4 chr2 24672451 24672706 -228583877 + L2 LINE L2 2174 2502 -812 1702 156 9 55 chr2 24672911 24673238 -228583345 - AluJb SINE Alu 0 312 1 337 295 18 18 chr2 24674115 24674227 -228582356 + L2 LINE L2 3199 3310 -3 21 0 0 0 chr2 24674273 24674294 -228582289 + AT_rich Low_complexity Low_complexity 1 21 0 292 287 46 0 chr2 24674474 24674561 -228582022 - MIR SINE MIR -116 146 56 191 252 92 76 chr2 24674575 24674694 -228581889 + MIR SINE MIR 35 155 -107 1864 149 29 19 chr2 24674738 24674876 -228581707 + AluJo SINE Alu 1 136 -176 2290 104 0 13 chr2 24674876 24675185 -228581398 + AluSx SINE Alu 1 305 -7 1864 149 29 19 chr2 24675185 24675354 -228581229 + AluJo SINE Alu 136 311 -1 186 43 0 0 chr2 24675887 24675910 -228580673 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 225 346 39 68 chr2 24676114 24676447 -228580136 + L2 LINE L2 2739 3063 -209 2385 83 10 0 chr2 24676709 24677010 -228579573 + AluSx SINE Alu 1 304 -8 181 139 0 56 chr2 24677010 24677046 -228579537 - MIR SINE MIR -173 89 56 362 250 55 62 chr2 24677360 24677488 -228579095 + MIR SINE MIR 116 242 -20 186 208 0 0 chr2 24677504 24677552 -228579031 + (CAT)n Simple_repeat Simple_repeat 1 48 0 203 267 0 0 chr2 24678171 24678216 -228578367 - L2 LINE L2 -3 3310 3266 198 276 92 59 chr2 24678283 24678435 -228578148 - MIR SINE MIR -85 177 21 203 189 0 0 chr2 24678704 24678741 -228577842 + T-rich Low_complexity Low_complexity 1 37 0 2504 64 0 0 chr2 24679588 24679884 -228576699 + AluY SINE Alu 1 296 -15 2014 114 10 23 chr2 24680003 24680302 -228576281 + AluSx SINE Alu 1 295 -17 2333 77 3 13 chr2 24680302 24680601 -228575982 + AluSg SINE Alu 1 296 -14 24 0 0 0 chr2 24681526 24681550 -228575033 + AT_rich Low_complexity Low_complexity 1 24 0 897 164 11 32 chr2 24681674 24681871 -228574712 + L1MC3 LINE L1 7613 7785 0 480 286 89 17 chr2 24682354 24682601 -228573982 - L1ME3A LINE L1 -264 5906 5645 1667 294 39 10 chr2 24682755 24683242 -228573341 - MLT1J LTR MaLR -3 508 8 360 152 45 89 chr2 24683306 24683418 -228573165 - L1ME4a LINE L1 -66 6055 5949 2546 90 48 25 chr2 24683469 24683825 -228572758 - THE1B LTR MaLR 0 364 1 216 316 158 9 chr2 24684377 24684491 -228572092 - L2 LINE L2 -4 3309 3179 814 194 0 0 chr2 24684510 24684639 -228571944 + FLAM_C SINE Alu 1 129 -4 818 263 79 4 chr2 24684644 24684872 -228571711 - MIR SINE MIR -17 245 1 1969 175 19 30 chr2 24684975 24685341 -228571242 - MLT1A1 LTR MaLR 0 365 4 1572 169 6 98 chr2 24685597 24685934 -228570649 - AluJo SINE Alu -6 306 1 343 340 0 0 chr2 24686301 24686395 -228570188 - L2 LINE L2 -494 2820 2727 757 147 7 73 chr2 24686396 24686546 -228570037 + AluJo SINE Alu 84 223 -89 24 0 0 0 chr2 24687235 24687259 -228569324 + AT_rich Low_complexity Low_complexity 1 24 0 346 291 95 25 chr2 24687324 24687482 -228569101 + L1MEd LINE L1 417 585 -5945 724 224 90 0 chr2 24687874 24688016 -228568567 + L1ME3 LINE L1 5148 5315 -831 195 42 0 0 chr2 24688016 24688040 -228568543 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 724 224 90 0 chr2 24688040 24688098 -228568485 + L1ME3 LINE L1 5315 5366 -780 2227 117 0 0 chr2 24688099 24688397 -228568186 + AluSx SINE Alu 1 298 -14 247 219 20 1 chr2 24688398 24688687 -228567896 + L1ME3 LINE L1 5819 6104 -72 1759 126 82 7 chr2 24688687 24688957 -228567626 + AluJb SINE Alu 1 290 -22 247 219 20 1 chr2 24688957 24688968 -228567615 + L1ME3 LINE L1 6104 6113 -63 505 105 0 13 chr2 24688974 24689050 -228567533 - AluSg/x SINE Alu -18 292 218 273 29 0 0 chr2 24689068 24689102 -228567481 + (CA)n Simple_repeat Simple_repeat 1 34 0 1849 94 3 84 chr2 24689103 24689400 -228567183 + AluY SINE Alu 21 293 -18 886 276 72 32 chr2 24689480 24689978 -228566605 + L1MEd LINE L1 1304 1941 -960 2435 77 0 0 chr2 24689978 24690276 -228566307 + AluY SINE Alu 1 298 -13 886 276 72 32 chr2 24690276 24690403 -228566180 + L1MEd LINE L1 1941 2061 -840 677 116 0 0 chr2 24690714 24690809 -228565774 + AluS SINE Alu 5 99 -214 318 336 8 0 chr2 24690974 24691105 -228565478 + L1MEd LINE L1 2443 2574 -3966 1638 165 11 25 chr2 24691111 24691396 -228565187 + AluJo SINE Alu 1 281 -31 * 2343 97 3 7 chr2 24691395 24691693 -228564890 - AluSg SINE Alu -13 297 1 1845 169 0 13 chr2 24691927 24692234 -228564349 + AluJo SINE Alu 1 303 -9 2360 94 0 3 chr2 24692236 24692545 -228564038 + AluSc SINE Alu 1 308 -1 811 221 23 0 chr2 24692583 24692755 -228563828 - AluJb SINE Alu 0 312 137 251 286 0 24 chr2 24692772 24692856 -228563727 + L2 LINE L2 3228 3309 -4 396 299 29 59 chr2 24692872 24693280 -228563303 + L1MEd LINE L1 2851 3246 -3294 2005 127 21 0 chr2 24693409 24693733 -228562850 + AluSx SINE Alu 4 312 0 21 57 0 0 chr2 24693837 24693872 -228562711 + AT_rich Low_complexity Low_complexity 1 35 0 752 257 68 89 chr2 24694019 24694449 -228562134 + L1MEd LINE L1 4025 4441 -2099 1203 170 158 19 chr2 24694449 24694595 -228561988 + AluJb SINE Alu 1 125 -177 2264 116 0 3 chr2 24694595 24694896 -228561687 + AluSx SINE Alu 1 300 -12 1203 170 158 19 chr2 24694896 24695014 -228561569 + AluJb SINE Alu 125 302 0 752 257 68 89 chr2 24695014 24695167 -228561416 + L1MEd LINE L1 4441 4596 -1944 3517 189 34 60 chr2 24695168 24696039 -228560544 - L1MCb LINE L1 -4958 1087 239 243 200 29 57 chr2 24696041 24696111 -228560472 + Charlie1 DNA MER1_type 1589 1656 -1105 58 38 0 0 chr2 24696111 24696190 -228560393 + AT_rich Low_complexity Low_complexity 1 79 0 864 119 0 0 chr2 24696193 24696311 -228560272 - FLAM_C SINE Alu -15 118 1 4972 171 69 31 chr2 24696312 24696326 -228560257 + Charlie1 DNA MER1_type 1630 1642 -1119 2332 108 0 0 chr2 24696326 24696623 -228559960 - AluSx SINE Alu -15 297 1 4972 171 69 31 chr2 24696623 24697694 -228558889 + Charlie1 DNA MER1_type 1642 2756 -5 2291 94 0 0 chr2 24697718 24698005 -228558578 + AluSg SINE Alu 1 287 -23 25 31 0 0 chr2 24698140 24698172 -228558411 + AT_rich Low_complexity Low_complexity 1 32 0 2070 132 3 0 chr2 24698196 24698492 -228558091 + AluSx SINE Alu 1 297 -15 2344 105 3 0 chr2 24698655 24698961 -228557622 + AluSc SINE Alu 1 307 -2 1490 138 176 0 chr2 24701319 24701558 -228555025 + AluJo SINE Alu 1 281 -31 233 359 63 0 chr2 24701943 24702085 -228554498 - MIR3 SINE MIR -21 187 37 207 100 0 0 chr2 24702319 24702349 -228554234 + (CAAGA)n Simple_repeat Simple_repeat 4 33 0 548 175 126 0 chr2 24702361 24702464 -228554119 - FLAM_A SINE Alu -17 116 1 321 336 23 8 chr2 24702596 24702724 -228553859 + MIR SINE MIR 21 150 -58 2281 116 0 22 chr2 24702797 24703116 -228553467 + AluSq SINE Alu 1 312 -1 1869 167 0 3 chr2 24704058 24704352 -228552231 + AluJb SINE Alu 1 293 -19 666 186 53 112 chr2 24704406 24704530 -228552053 - MSTD LTR MaLR -2 394 264 1575 140 140 4 chr2 24704530 24704794 -228551789 - AluSg SINE Alu 0 300 1 1996 151 3 3 chr2 24704800 24705104 -228551479 - AluJb SINE Alu -8 304 1 666 186 53 112 chr2 24705104 24705160 -228551423 - MSTD LTR MaLR -137 259 218 1068 194 16 52 chr2 24705198 24705446 -228551137 - MSTD LTR MaLR -157 239 1 219 380 9 0 chr2 24705618 24705731 -228550852 - L2 LINE L2 -779 2535 2422 378 267 42 42 chr2 24705782 24705902 -228550681 + MARNA DNA Mariner 110 229 -357 186 348 51 51 chr2 24705930 24706048 -228550535 - L2 LINE L2 -6 3266 3149 201 152 0 0 chr2 24706388 24706421 -228550162 + (CA)n Simple_repeat Simple_repeat 1 33 0 1979 102 36 7 chr2 24706599 24706910 -228549673 + AluSg SINE Alu 2 320 0 443 320 152 36 chr2 24707062 24707126 -228549457 - L2 LINE L2 -10 3303 3248 1638 140 57 21 chr2 24707126 24707405 -228549178 - AluSx SINE Alu -19 293 5 443 320 152 36 chr2 24707405 24707787 -228548796 - L2 LINE L2 -65 3248 2805 2370 66 21 0 chr2 24707818 24708106 -228548477 + AluY SINE Alu 1 294 -17 209 222 16 0 chr2 24708141 24708204 -228548379 + (CA)n Simple_repeat Simple_repeat 2 65 0 302 195 345 18 chr2 24708204 24708317 -228548266 - MARNA DNA Mariner -422 164 15 256 345 18 0 chr2 24708795 24708905 -228547678 - L1ME LINE L1 -309 5855 5744 2202 105 0 3 chr2 24708919 24709205 -228547378 - AluSx SINE Alu -7 305 21 195 42 0 0 chr2 24710161 24710185 -228546398 + (A)n Simple_repeat Simple_repeat 1 24 0 2191 105 0 3 chr2 24710313 24710607 -228545976 + AluSg SINE Alu 17 309 -1 657 183 0 8 chr2 24711221 24711347 -228545236 + MLT2D LTR ERVL 3 127 -287 2063 126 14 0 chr2 24711347 24711632 -228544951 + AluSq SINE Alu 1 289 -24 189 0 0 0 chr2 24711632 24711653 -228544930 + (GA)n Simple_repeat Simple_repeat 2 22 0 661 151 12 84 chr2 24711733 24711899 -228544684 - MER3 DNA MER1_type 0 2624 2471 396 154 0 99 chr2 24711902 24711993 -228544590 - MER3 DNA MER1_type -95 114 33 451 283 100 6 chr2 24712729 24712909 -228543674 + LTR67 LTR ERVL 354 550 -7 637 291 90 4 chr2 24712986 24713230 -228543353 + L1MC/D LINE L1 5498 5762 -2046 200 231 77 0 chr2 24713738 24713790 -228542793 - MER91C DNA MER1_type -42 98 43 663 94 19 38 chr2 24714008 24714114 -228542469 - Tigger7 DNA MER2_type 0 2487 2384 2163 133 0 0 chr2 24714119 24714420 -228542163 - AluSx SINE Alu -11 301 1 2551 62 0 7 chr2 24714556 24714863 -228541720 + AluY SINE Alu 1 305 -6 28 29 0 0 chr2 24714938 24714973 -228541610 + AT_rich Low_complexity Low_complexity 1 35 0 1800 152 10 28 chr2 24715114 24715403 -228541180 + AluJb SINE Alu 1 284 -28 303 28 0 0 chr2 24715407 24715443 -228541140 + (CA)n Simple_repeat Simple_repeat 2 37 0 1912 158 10 6 chr2 24715737 24716048 -228540535 + AluSx SINE Alu 1 312 0 2226 161 3 6 chr2 24716241 24716601 -228539982 - LOR1b LTR ERV1 0 461 103 1834 124 3 64 chr2 24716601 24716915 -228539668 + AluSx SINE Alu 18 312 0 284 247 74 12 chr2 24716991 24717072 -228539511 + HAL1 LINE L1 20 105 -2402 1571 248 35 63 chr2 24717101 24717622 -228538961 - LTR33 LTR ERVL -2 519 14 361 319 58 62 chr2 24717759 24717884 -228538699 + HAL1 LINE L1 276 401 -2106 2219 123 0 16 chr2 24717884 24718200 -228538383 - AluSx SINE Alu -1 311 1 361 319 58 62 chr2 24718200 24718315 -228538268 + HAL1 LINE L1 401 515 -1992 419 236 79 140 chr2 24718360 24718653 -228537930 + HAL1 LINE L1 1982 2227 -280 1888 163 3 14 chr2 24718653 24718948 -228537635 + AluJo SINE Alu 1 292 -20 419 236 79 140 chr2 24718948 24719210 -228537373 + HAL1 LINE L1 2227 2503 -4 1708 167 33 0 chr2 24719221 24719497 -228537086 - AluJo SINE Alu -23 289 5 1430 256 67 40 chr2 24719549 24720465 -228536118 + L1ME LINE L1 532 1461 -4619 2410 83 3 0 chr2 24720466 24720767 -228535816 + AluSx SINE Alu 1 302 -10 544 145 11 0 chr2 24720780 24720881 -228535702 + L1MB3 LINE L1 5385 5486 -682 637 197 0 16 chr2 24720900 24721022 -228535561 + AluSq/x SINE Alu 15 134 -178 3396 130 42 35 chr2 24721032 24721158 -228535425 + L1MB3 LINE L1 5483 5607 -576 2173 125 0 13 chr2 24721158 24721463 -228535120 + AluSx SINE Alu 1 301 -11 3396 130 42 35 chr2 24721463 24721532 -228535051 + L1MB3 LINE L1 5607 5674 -509 2341 103 0 0 chr2 24721532 24721834 -228534749 + AluSg SINE Alu 1 302 -8 3396 130 42 35 chr2 24721834 24722226 -228534357 + L1MB3 LINE L1 5674 6078 -105 3502 135 52 74 chr2 24722226 24722606 -228533977 + LTR8A LTR ERV1 1 359 -368 1784 163 29 0 chr2 24722606 24722883 -228533700 - AluSx SINE Alu -11 301 17 3502 135 52 74 chr2 24722883 24723245 -228533338 + LTR8A LTR ERV1 359 727 0 3396 130 42 35 chr2 24723245 24723276 -228533307 + L1MB3 LINE L1 6078 6107 -76 1205 162 0 0 chr2 24723277 24723462 -228533121 + AluSg/x SINE Alu 116 300 -12 424 133 13 0 chr2 24723462 24723537 -228533046 + L1MB2 LINE L1 6093 6168 -3 290 221 52 0 chr2 24723547 24723624 -228532959 + L1ME LINE L1 1492 1572 -4689 516 101 63 0 chr2 24723706 24723785 -228532798 + AluS SINE Alu 2 85 -228 1279 168 0 59 chr2 24723797 24724035 -228532548 - AluJb SINE Alu -88 224 1 5106 160 60 0 chr2 24724138 24724609 -228531974 + L1M1 LINE L1 1271 1815 -5750 387 0 0 0 chr2 24724609 24724652 -228531931 + (GA)n Simple_repeat Simple_repeat 2 44 0 5106 160 60 0 chr2 24724652 24725007 -228531576 + L1M1 LINE L1 1815 2147 -5418 1777 88 21 121 chr2 24725006 24725141 -228531442 + L1MA2 LINE L1 5925 6072 -232 * 2052 85 19 65 chr2 24725141 24725448 -228531135 + AluSq SINE Alu 5 297 -16 1777 88 21 121 chr2 24725448 24725518 -228531065 + L1MA2 LINE L1 6072 6147 -157 180 0 0 0 chr2 24725518 24725538 -228531045 + (TA)n Simple_repeat Simple_repeat 2 21 0 1960 124 3 18 chr2 24725542 24725825 -228530758 - AluJo SINE Alu -33 279 1 1777 88 21 121 chr2 24725825 24725865 -228530718 + L1MA2 LINE L1 6150 6192 -112 1603 141 112 11 chr2 24725865 24726141 -228530442 + AluSx SINE Alu 1 304 -8 1777 88 21 121 chr2 24726141 24726261 -228530322 + L1MA2 LINE L1 6192 6260 -44 21 0 0 0 chr2 24726278 24726299 -228530284 + AT_rich Low_complexity Low_complexity 1 21 0 1088 121 90 0 chr2 24726299 24726465 -228530118 + AluSx SINE Alu 1 181 -131 421 40 0 0 chr2 24726466 24726516 -228530067 + AluSp/q SINE Alu 216 265 -48 2063 29 0 0 chr2 24726516 24726755 -228529828 + L1PA4 LINE L1 5914 6152 -3 239 94 113 0 chr2 24726761 24726814 -228529769 + L1MA3 LINE L1 6246 6304 -1 1818 122 0 4 chr2 24726916 24727171 -228529412 - AluSg SINE Alu -5 305 52 342 256 248 15 chr2 24727330 24727463 -228529120 - MER5A DNA MER1_type 0 189 26 2141 103 0 0 chr2 24727986 24728267 -228528316 + AluSx SINE Alu 1 281 -31 2313 106 7 0 chr2 24728321 24728623 -228527960 + AluSx SINE Alu 1 304 -8 1867 159 90 45 chr2 24728674 24728695 -228527888 - MER31B LTR ERV1 0 466 447 2374 111 0 0 chr2 24728695 24729002 -228527581 + AluSx SINE Alu 1 307 -5 1867 159 90 45 chr2 24729002 24729426 -228527157 - MER31B LTR ERV1 -19 447 1 201 178 0 0 chr2 24729757 24729802 -228526781 + (CA)n Simple_repeat Simple_repeat 2 46 0 2333 103 0 0 chr2 24729885 24730185 -228526398 - AluSx SINE Alu -10 302 3 187 282 86 60 chr2 24730384 24730450 -228526133 - MIR SINE MIR -114 148 76 2365 58 41 7 chr2 24730450 24730745 -228525838 + AluY SINE Alu 1 305 -6 187 282 86 60 chr2 24730745 24730795 -228525788 - MIR SINE MIR -186 76 29 2467 87 3 0 chr2 24730943 24731252 -228525331 + AluSp SINE Alu 1 310 -3 2153 90 24 7 chr2 24731482 24731770 -228524813 + AluSq SINE Alu 1 293 -20 2337 100 0 0 chr2 24731780 24732081 -228524502 + AluSq SINE Alu 1 301 -12 311 210 225 22 chr2 24732091 24732229 -228524354 + MER53 DNA DNA 1 166 -23 258 176 0 0 chr2 24732278 24732329 -228524254 + GA-rich Low_complexity Low_complexity 1 51 0 1904 119 3 66 chr2 24732480 24732802 -228523781 - AluSx SINE Alu 0 303 1 744 226 101 76 chr2 24732853 24733080 -228523503 + L1ME4a LINE L1 5564 5784 -337 2003 152 0 7 chr2 24733080 24733377 -228523206 + AluSx SINE Alu 1 295 -17 744 226 101 76 chr2 24733377 24733556 -228523027 + L1ME4a LINE L1 5784 5988 -133 1919 95 42 4 chr2 24733556 24733847 -228522736 - AluSc SINE Alu 0 309 12 744 226 101 76 chr2 24733847 24733966 -228522617 + L1ME4a LINE L1 5988 6103 -18 2239 128 0 0 chr2 24733973 24734277 -228522306 - AluSx SINE Alu -8 304 1 288 0 0 0 chr2 24734670 24734702 -228521881 + (TG)n Simple_repeat Simple_repeat 1 32 0 948 71 0 0 chr2 24734702 24734815 -228521768 - AluY SINE Alu -31 280 168 2177 118 3 3 chr2 24735087 24735391 -228521192 + AluSx SINE Alu 2 305 -7 2075 104 11 7 chr2 24735393 24735519 -228521064 + AluSg SINE Alu 1 125 -178 477 0 0 0 chr2 24735519 24735572 -228521011 + (CA)n Simple_repeat Simple_repeat 2 54 0 2075 104 11 7 chr2 24735572 24735747 -228520836 + AluSg SINE Alu 125 303 0 4565 164 32 30 chr2 24735769 24736580 -228520003 - MER21B LTR ERV1 -50 813 1 1392 160 53 42 chr2 24736604 24736772 -228519811 - AluJo SINE Alu -18 294 120 225 0 0 0 chr2 24736772 24736797 -228519786 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1392 160 53 42 chr2 24736797 24736891 -228519692 - AluJo SINE Alu -192 120 29 2441 96 0 0 chr2 24737011 24737323 -228519260 - AluSx SINE Alu 0 312 1 1875 172 0 3 chr2 24737434 24737742 -228518841 - AluJb SINE Alu -3 309 3 2455 80 3 0 chr2 24738292 24738594 -228517989 + AluY SINE Alu 1 303 -8 2411 92 0 0 chr2 24738606 24738901 -228517682 + AluSc SINE Alu 3 297 -12 1077 166 0 17 chr2 24738924 24739099 -228517484 - FRAM SINE Alu -7 169 1 1870 150 0 7 chr2 24739213 24739506 -228517077 - AluJb SINE Alu -21 291 1 2356 105 0 0 chr2 24739890 24740196 -228516387 - AluSx SINE Alu -6 306 1 1300 88 0 0 chr2 24740472 24740631 -228515952 + AluSg/x SINE Alu 132 290 -20 1483 169 75 7 chr2 24740640 24740918 -228515665 + AluJb SINE Alu 2 298 -14 265 227 80 0 chr2 24741085 24741160 -228515423 + MLT1L LTR MaLR 535 615 0 331 306 0 36 chr2 24741802 24741913 -228514670 + L2 LINE L2 3207 3313 0 26 50 0 0 chr2 24742018 24742058 -228514525 + AT_rich Low_complexity Low_complexity 1 40 0 1297 184 5 0 chr2 24742080 24742297 -228514286 - MLT1A1 LTR MaLR 0 365 148 1693 107 25 8 chr2 24742298 24742542 -228514041 - AluSc SINE Alu -12 297 50 1784 120 0 4 chr2 24742542 24742784 -228513799 - AluSc SINE Alu -68 241 1 1864 145 4 0 chr2 24742792 24743061 -228513522 - AluSg SINE Alu -11 299 30 831 122 88 20 chr2 24743119 24743267 -228513316 + MLT1A1 LTR MaLR 3 160 -205 2346 69 13 7 chr2 24743267 24743571 -228513012 + AluSc SINE Alu 1 306 -3 2154 99 0 7 chr2 24743590 24743941 -228512642 + AluSx SINE Alu 1 349 0 354 227 13 0 chr2 24744500 24744575 -228512008 + AluJ/FLAM SINE Alu 1 76 -226 193 275 176 22 chr2 24744861 24744952 -228511631 + MIR SINE MIR 158 262 0 32 0 0 0 chr2 24745576 24745608 -228510975 + AT_rich Low_complexity Low_complexity 1 32 0 225 325 12 0 chr2 24745879 24745962 -228510621 + L1MEc LINE L1 1729 1812 -4584 25 31 0 0 chr2 24745988 24746020 -228510563 + AT_rich Low_complexity Low_complexity 1 32 0 2302 99 0 3 chr2 24746022 24746324 -228510259 + AluSq SINE Alu 13 313 0 377 293 81 65 chr2 24746845 24747152 -228509431 - L2 LINE L2 -2563 751 440 267 222 278 0 chr2 24747694 24747766 -228508817 + MER117 DNA MER1_type 1 92 -105 2304 76 13 25 chr2 24748266 24748582 -228508001 + AluSx SINE Alu 1 312 0 2388 78 0 0 chr2 24748635 24748930 -228507653 - AluSq SINE Alu -18 295 1 448 270 132 93 chr2 24749585 24750425 -228506158 - L1M2 LINE L1 -5445 1404 532 189 74 0 0 chr2 24750727 24750754 -228505829 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 438 296 97 23 chr2 24751915 24752131 -228504452 - MIR SINE MIR -12 250 19 2201 81 20 7 chr2 24752180 24752477 -228504106 + AluSg SINE Alu 2 302 -8 6740 73 11 21 chr2 24752776 24753471 -228503112 - L1PA8A LINE L1 -3 6128 5427 2163 91 39 0 chr2 24753471 24753756 -228502827 - AluSq SINE Alu -17 296 1 6740 73 11 21 chr2 24753756 24754013 -228502570 - L1PA8A LINE L1 -704 5427 5169 1834 131 64 17 chr2 24754013 24754171 -228502412 - AluSx SINE Alu -1 311 162 2332 81 10 7 chr2 24754171 24754467 -228502116 - AluSq SINE Alu -16 297 1 1834 131 64 17 chr2 24754467 24754605 -228501978 - AluSx SINE Alu -150 162 1 6740 73 11 21 chr2 24754605 24755043 -228501540 - L1PA8A LINE L1 -962 5169 4753 684 220 148 19 chr2 24755674 24755883 -228500700 + MIR SINE MIR 10 245 -17 246 188 50 38 chr2 24756426 24756506 -228500077 - L1MB8 LINE L1 -6 6172 6092 * 693 293 48 11 chr2 24756502 24756772 -228499811 - L1ME LINE L1 -357 5764 5485 1304 139 94 66 chr2 24756780 24757067 -228499516 - AluJb SINE Alu -10 302 8 3279 163 33 17 chr2 24758180 24758868 -228497715 - Tigger7 DNA MER2_type 0 2587 1 220 292 146 0 chr2 24758868 24758964 -228497619 - MIR SINE MIR -114 148 39 188 221 263 11 chr2 24759006 24759101 -228497482 - L2 LINE L2 -10 3303 3185 3818 133 26 48 chr2 24759357 24760041 -228496542 - L1MB7 LINE L1 0 6184 5516 314 81 0 20 chr2 24760689 24760744 -228495839 + MER41A LTR ERV1 390 440 -114 285 29 0 0 chr2 24761240 24761274 -228495309 + (ATG)n Simple_repeat Simple_repeat 2 35 0 807 179 0 0 chr2 24761279 24761402 -228495181 - FLAM_C SINE Alu -19 124 2 2069 81 67 50 chr2 24761899 24762197 -228494386 + AluSq SINE Alu 2 304 -9 1464 209 13 17 chr2 24762297 24762598 -228493985 - AluJo SINE Alu -12 300 1 285 280 86 16 chr2 24762678 24762691 -228493892 - L1ME4a LINE L1 -207 5914 5903 2189 106 3 0 chr2 24762691 24762983 -228493600 - AluSp SINE Alu -20 293 1 285 280 86 16 chr2 24762983 24763226 -228493357 - L1ME4a LINE L1 -218 5903 5640 2257 114 0 0 chr2 24763226 24763533 -228493050 + AluSg SINE Alu 2 308 -2 951 182 30 10 chr2 24763630 24763828 -228492755 - L1MC2 LINE L1 0 6344 6143 1827 178 63 39 chr2 24763835 24764245 -228492338 - L1MC3 LINE L1 -191 7594 7175 1134 181 73 26 chr2 24765186 24765408 -228491175 + MER33 DNA MER1_type 4 245 -2340 2191 139 0 0 chr2 24765408 24765718 -228490865 - AluSx SINE Alu -2 310 1 1134 181 73 26 chr2 24765718 24765798 -228490785 + MER33 DNA MER1_type 245 320 -4 604 292 152 16 chr2 24765804 24766417 -228490166 + L1ME4a LINE L1 5316 6011 -110 329 219 71 90 chr2 24766722 24766877 -228489706 + L1ME3A LINE L1 5570 5721 -400 26 30 0 0 chr2 24767135 24767168 -228489415 + AT_rich Low_complexity Low_complexity 1 33 0 1818 158 7 7 chr2 24767281 24767579 -228489004 - AluJb SINE Alu -14 298 1 1391 162 29 55 chr2 24767927 24768199 -228488384 + AluJb SINE Alu 39 303 -9 1540 138 107 11 chr2 24768528 24768789 -228487794 - AluSx SINE Alu -24 288 3 404 328 130 42 chr2 24768993 24769401 -228487182 + L2 LINE L2 2149 2592 -722 611 258 94 9 chr2 24769678 24769891 -228486692 + L1ME3A LINE L1 5857 6087 -83 2262 102 3 0 chr2 24769893 24770188 -228486395 - AluSx SINE Alu -16 296 1 1669 181 0 50 chr2 24770327 24770647 -228485936 - AluJo SINE Alu -8 304 1 1761 149 57 4 chr2 24770900 24771181 -228485402 - AluSc SINE Alu -13 296 1 686 205 8 0 chr2 24771555 24771677 -228484906 - FLAM_C SINE Alu -19 124 2 210 128 0 0 chr2 24771711 24771750 -228484833 + (TGAA)n Simple_repeat Simple_repeat 4 42 0 2832 120 22 29 chr2 24771837 24772436 -228484147 - MER4E LTR ERV1 0 779 1 841 184 0 22 chr2 24772598 24772734 -228483849 + FLAM_A SINE Alu 1 133 0 2407 79 0 3 chr2 24772738 24773030 -228483553 + AluSg SINE Alu 1 291 -19 356 200 12 0 chr2 24773031 24773116 -228483467 + (TA)n Simple_repeat Simple_repeat 1 86 0 225 347 84 0 chr2 24773507 24773602 -228482981 - L2 LINE L2 0 3313 3211 2520 59 0 3 chr2 24774125 24774428 -228482155 - AluY SINE Alu -9 302 1 2174 80 28 0 chr2 24774456 24774743 -228481840 + AluSx SINE Alu 1 295 -17 1647 194 0 3 chr2 24774754 24775043 -228481540 + AluJb SINE Alu 1 288 -24 276 235 210 25 chr2 24775045 24775164 -228481419 + MIR3 SINE MIR 23 163 -45 2900 6 0 0 chr2 24775295 24775606 -228480977 - AluY SINE Alu 0 311 1 1546 116 0 19 chr2 24775983 24776029 -228480554 + AluSg/x SINE Alu 89 134 -176 2270 109 0 0 chr2 24776029 24776331 -228480252 + AluSx SINE Alu 1 302 -10 1546 116 0 19 chr2 24776331 24776499 -228480084 + AluSg/x SINE Alu 134 299 -11 440 269 167 32 chr2 24777223 24777409 -228479174 + MIR SINE MIR 25 235 -27 2234 101 7 0 chr2 24778130 24778426 -228478157 - AluSq SINE Alu -15 298 1 2378 102 0 3 chr2 24779015 24779319 -228477264 + AluSq SINE Alu 1 303 -10 2315 103 0 0 chr2 24779321 24779622 -228476961 + AluSx SINE Alu 1 301 -11 21 0 0 0 chr2 24780645 24780666 -228475917 + AT_rich Low_complexity Low_complexity 1 21 0 1974 116 54 0 chr2 24780821 24780936 -228475647 + AluSx SINE Alu 1 108 -204 207 0 0 0 chr2 24780936 24780959 -228475624 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1974 116 54 0 chr2 24780959 24781137 -228475446 + AluSx SINE Alu 108 310 -2 492 239 168 14 chr2 24781244 24781453 -228475130 - MIR SINE MIR -3 259 19 2005 159 0 0 chr2 24781625 24781920 -228474663 + AluSx SINE Alu 1 295 -17 2036 131 13 10 chr2 24782790 24783102 -228473481 + AluSq SINE Alu 1 313 0 25 0 0 0 chr2 24783786 24783811 -228472772 + AT_rich Low_complexity Low_complexity 1 25 0 348 148 0 0 chr2 24784418 24784479 -228472104 + (TG)n Simple_repeat Simple_repeat 2 62 0 1821 167 3 7 chr2 24784966 24785260 -228471323 - AluJo SINE Alu -19 293 1 1625 134 21 35 chr2 24785508 24785791 -228470792 - AluJb SINE Alu -4 308 30 270 0 0 0 chr2 24786122 24786152 -228470431 + (TTTAA)n Simple_repeat Simple_repeat 3 32 0 2320 77 0 0 chr2 24786152 24786437 -228470146 - AluY SINE Alu -26 285 1 3641 196 60 33 chr2 24786688 24787965 -228468618 - L1ME1 LINE L1 -30 6136 4823 807 297 18 0 chr2 24787994 24788223 -228468360 + MIR SINE MIR 29 261 -1 235 285 73 57 chr2 24788228 24788351 -228468232 - MIR SINE MIR -62 200 76 824 231 83 23 chr2 24788360 24788576 -228468007 + MIR SINE MIR 23 251 -11 533 213 28 9 chr2 24789231 24789339 -228467244 - LTR40a LTR ERVL -407 112 3 981 212 107 9 chr2 24789349 24789620 -228466963 - HERVL40 LTR ERVL -8 5522 2837 1693 122 30 104 chr2 24789637 24789832 -228466751 - AluJo SINE Alu 0 312 151 2910 13 0 0 chr2 24789832 24790150 -228466433 - AluYb8 SINE Alu 0 318 1 1693 122 30 104 chr2 24790150 24790291 -228466292 - AluJo SINE Alu -161 151 1 380 121 0 0 chr2 24790419 24790477 -228466106 - HERVL40 LTR ERVL -254 2783 2726 349 260 92 104 chr2 24790572 24791168 -228465415 - HERVL40 LTR ERVL -347 4660 2202 1196 206 4 74 chr2 24791218 24791247 -228465336 - HERVL40 LTR ERVL -1240 4290 4261 2201 127 9 35 chr2 24791247 24791593 -228464990 - MER1B DNA MER1_type 0 337 1 1196 206 4 74 chr2 24791593 24791981 -228464602 - HERVL40 LTR ERVL -1269 4261 3806 1663 126 15 31 chr2 24791981 24792242 -228464341 + AluJb SINE Alu 40 296 -16 1196 206 4 74 chr2 24792242 24792298 -228464285 - HERVL40 LTR ERVL -1724 3806 3748 534 198 58 0 chr2 24792319 24792440 -228464143 + L1MC1 LINE L1 6206 6333 0 478 227 153 12 chr2 24792444 24792607 -228463976 - HERVL40 LTR ERVL -1808 3722 3537 733 243 44 11 chr2 24792618 24792799 -228463784 - HERVL40 LTR ERVL -2118 3412 3226 1078 228 102 22 chr2 24792817 24792987 -228463596 - HERVL40 LTR ERVL -2060 977 1168 2226 99 0 13 chr2 24792987 24793289 -228463294 - AluSq SINE Alu -15 298 1 1078 228 102 22 chr2 24793289 24793586 -228462997 - HERVL40 LTR ERVL -1868 1169 897 764 174 22 11 chr2 24793627 24793805 -228462778 + L1MD3 LINE L1 7816 7995 0 2197 91 0 14 chr2 24793809 24794125 -228462458 + AluSc SINE Alu 3 309 0 214 376 44 76 chr2 24794290 24794443 -228462140 + L2 LINE L2 2941 3097 -175 1617 175 53 22 chr2 24794443 24794803 -228461780 - THE1C LTR MaLR 0 375 5 214 376 44 76 chr2 24794803 24794992 -228461591 + L2 LINE L2 3097 3272 0 817 289 54 8 chr2 24795803 24796042 -228460541 - MIR SINE MIR -11 251 2 1531 269 42 9 chr2 24796080 24796511 -228460072 - LTR40c LTR ERVL -16 449 5 1497 157 57 23 chr2 24797043 24797305 -228459278 + AluJo SINE Alu 31 301 -11 293 226 32 86 chr2 24797615 24797708 -228458875 + L2 LINE L2 3185 3272 0 344 238 79 16 chr2 24798337 24798463 -228458120 - MER94 DNA DNA 0 134 1 815 181 14 0 chr2 24798855 24798993 -228457590 + FAM SINE Alu 13 152 -33 225 0 0 0 chr2 24799300 24799325 -228457258 + (TG)n Simple_repeat Simple_repeat 2 26 0 26 30 0 0 chr2 24800255 24800288 -228456295 + AT_rich Low_complexity Low_complexity 1 33 0 451 290 87 27 chr2 24800597 24800780 -228455803 + MIR SINE MIR 53 246 -16 2056 101 3 42 chr2 24800888 24801196 -228455387 + AluSx SINE Alu 1 296 -16 1800 166 66 9 chr2 24801220 24801539 -228455044 - MER1B DNA MER1_type 0 337 1 50 31 0 0 chr2 24801566 24801630 -228454953 + AT_rich Low_complexity Low_complexity 1 64 0 328 324 89 11 chr2 24802783 24802962 -228453621 + L1ME3A LINE L1 5963 6155 -15 507 185 38 70 chr2 24803027 24803184 -228453399 + MER104 DNA Tc2 29 180 0 2466 75 0 0 chr2 24803284 24803578 -228453005 + AluSc SINE Alu 1 294 -15 692 195 49 0 chr2 24803588 24803711 -228452872 + FLAM_A SINE Alu 1 129 -4 1155 226 100 9 chr2 24803767 24804107 -228452476 + L1ME3 LINE L1 5736 6106 -56 2186 129 0 0 chr2 24804108 24804403 -228452180 + AluSx SINE Alu 1 295 -17 1942 92 92 3 chr2 24804786 24805068 -228451515 - AluSx SINE Alu -5 307 1 204 343 105 9 chr2 24805144 24805249 -228451334 - L2 LINE L2 -2 3270 3156 25 65 0 0 chr2 24805886 24805932 -228450651 + AT_rich Low_complexity Low_complexity 1 46 0 194 304 101 0 chr2 24806324 24806393 -228450190 + L2 LINE L2 3150 3225 -47 4021 142 56 7 chr2 24806774 24807540 -228449043 - Tigger3b DNA MER2_type -426 805 2 2437 51 0 3 chr2 24807889 24808215 -228448368 + AluY SINE Alu 1 311 0 1773 167 13 3 chr2 24808565 24808864 -228447719 + AluJo SINE Alu 1 302 -10 264 274 78 29 chr2 24808879 24808981 -228447602 - MIR SINE MIR -64 144 38 24 32 0 0 chr2 24809302 24809333 -228447250 + AT_rich Low_complexity Low_complexity 1 31 0 2095 99 42 3 chr2 24809669 24809952 -228446631 - AluSq SINE Alu -19 294 1 1490 126 0 14 chr2 24811139 24811361 -228445222 + AluJb SINE Alu 85 303 -9 2051 103 9 66 chr2 24811792 24811935 -228444648 + AluSx SINE Alu 1 150 -162 2246 102 10 0 chr2 24811935 24812229 -228444354 + AluSg SINE Alu 1 297 -13 2051 103 9 66 chr2 24812229 24812405 -228444178 + AluSx SINE Alu 150 302 -10 372 347 34 14 chr2 24812496 24812643 -228443940 + MIR3 SINE MIR 13 162 -46 21 0 0 0 chr2 24813182 24813203 -228443380 + AT_rich Low_complexity Low_complexity 1 21 0 1887 164 28 45 chr2 24813624 24814020 -228442563 - MLT1B LTR MaLR 0 390 2 21 36 0 0 chr2 24814490 24814518 -228442065 + AT_rich Low_complexity Low_complexity 1 28 0 2106 121 0 7 chr2 24814779 24815077 -228441506 + AluSx SINE Alu 1 296 -16 1439 205 54 0 chr2 24815294 24815635 -228440948 - MLT1A1 LTR MaLR -2 426 1 2063 114 0 0 chr2 24815972 24816244 -228440339 - AluSx SINE Alu -40 272 1 521 287 50 17 chr2 24818260 24818441 -228438142 - MIR SINE MIR -1 261 75 2431 91 0 0 chr2 24818600 24818908 -228437675 + AluSc SINE Alu 1 308 -1 1977 163 3 0 chr2 24818959 24819260 -228437323 + AluSx SINE Alu 1 302 -10 314 284 74 48 chr2 24819439 24819833 -228436750 + L1MC4a LINE L1 4672 5075 -1071 488 248 113 46 chr2 24819981 24820277 -228436306 + L1MC4a LINE L1 5292 5612 -509 * 2089 162 36 47 chr2 24820274 24820491 -228436092 + L1MA8 LINE L1 3864 4082 -2209 1396 91 106 10 chr2 24820491 24820699 -228435884 + MER30 DNA MER1_type 3 230 0 2089 162 36 47 chr2 24820699 24821414 -228435169 + L1MA8 LINE L1 4082 4803 -1488 2089 151 39 16 chr2 24821414 24821848 -228434735 + L1MA8 LINE L1 5841 6287 -4 2089 162 36 47 chr2 24821848 24821913 -228434670 + L1MA8 LINE L1 4803 4867 -1424 399 120 109 0 chr2 24821913 24822005 -228434578 + L1MA8 LINE L1 6180 6281 -10 2089 162 36 47 chr2 24822005 24822903 -228433680 + L1MA8 LINE L1 4867 6287 -4 794 187 0 24 chr2 24822886 24823052 -228433531 + L1MA9 LINE L1 5867 6028 -284 * 347 317 83 0 chr2 24823076 24823221 -228433362 + L1MC4a LINE L1 5755 5911 -1897 226 296 227 0 chr2 24823651 24823783 -228432800 - MIR SINE MIR -13 249 88 2582 62 0 0 chr2 24825195 24825499 -228431084 + AluSc SINE Alu 3 306 -3 22 35 0 0 chr2 24826162 24826191 -228430392 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 24826213 24826234 -228430349 + AT_rich Low_complexity Low_complexity 1 21 0 194 247 117 0 chr2 24826528 24826605 -228429978 + MIR3 SINE MIR 120 205 -3 2473 78 0 3 chr2 24826862 24827169 -228429414 + AluSq SINE Alu 1 306 -7 247 285 213 58 chr2 24827172 24827604 -228428979 - L2 LINE L2 -1387 1927 1429 4044 110 50 68 chr2 24827609 24828393 -228428190 - LTR1 LTR ERV1 0 785 16 1200 324 118 45 chr2 24828584 24829058 -228427525 - L2 LINE L2 -1921 1393 955 2239 112 0 3 chr2 24829058 24829362 -228427221 + AluSq SINE Alu 1 303 -10 1200 324 118 45 chr2 24829362 24830027 -228426556 - L2 LINE L2 -2359 955 171 2405 93 0 3 chr2 24830356 24830666 -228425917 + AluSg SINE Alu 1 309 -1 208 383 58 17 chr2 24830690 24830810 -228425773 + MIR SINE MIR 17 141 -67 624 240 30 43 chr2 24831176 24831409 -228425174 + L1M4 LINE L1 3781 4010 -2136 2427 88 0 0 chr2 24831436 24831742 -228424841 + AluSx SINE Alu 1 306 -6 366 354 127 23 chr2 24831961 24832221 -228424362 - L2 LINE L2 -1 3271 2985 911 201 88 38 chr2 24832312 24832422 -228424161 - MIR SINE MIR 0 262 159 1433 106 25 51 chr2 24832422 24832658 -228423925 - MER30 DNA MER1_type 0 230 1 911 201 88 38 chr2 24832658 24832786 -228423797 - MIR SINE MIR -103 159 12 269 293 61 94 chr2 24833489 24833817 -228422766 - MLT1K LTR MaLR -249 339 23 218 314 71 114 chr2 24833859 24833999 -228422584 + L2 LINE L2 3127 3260 -12 26 30 0 0 chr2 24834396 24834429 -228422154 + AT_rich Low_complexity Low_complexity 1 33 0 703 222 60 68 chr2 24834853 24835036 -228421547 + MIR SINE MIR 12 194 -68 799 143 0 30 chr2 24835036 24835169 -228421414 + FLAM_A SINE Alu 2 130 -3 703 222 60 68 chr2 24835169 24835219 -228421364 + MIR SINE MIR 194 243 -19 1704 165 3 20 chr2 24835801 24836098 -228420485 - AluJb SINE Alu -18 294 3 24 32 0 0 chr2 24836824 24836855 -228419728 + AT_rich Low_complexity Low_complexity 1 31 0 229 333 8 61 chr2 24836999 24837131 -228419452 - L2 LINE L2 -2892 422 298 1876 152 7 26 chr2 24837653 24837963 -228418620 + AluJo SINE Alu 1 304 -8 268 305 0 59 chr2 24838442 24838629 -228417954 + GA-rich Low_complexity Low_complexity 3 178 0 186 319 14 29 chr2 24840175 24840244 -228416339 + MIR SINE MIR 2 69 -193 245 269 213 9 chr2 24840638 24840746 -228415837 - L2 LINE L2 -1 3312 3183 1039 286 140 36 chr2 24840962 24841731 -228414852 - L2 LINE L2 -869 2445 1597 382 286 81 0 chr2 24841737 24841898 -228414685 - L1ME3 LINE L1 0 6162 5989 1590 170 10 21 chr2 24842533 24842822 -228413761 + AluJo SINE Alu 1 286 -26 195 129 0 0 chr2 24842902 24842933 -228413650 + (TATG)n Simple_repeat Simple_repeat 4 34 0 2453 52 3 0 chr2 24842991 24843301 -228413282 - L1PA7 LINE L1 -1 6153 5843 1752 177 0 25 chr2 24843424 24843740 -228412843 - AluJb SINE Alu -3 309 2 226 320 77 64 chr2 24844306 24844540 -228412043 - MIR SINE MIR -24 238 2 226 359 78 7 chr2 24844540 24844677 -228411906 - L2 LINE L2 -314 2958 2812 1258 227 44 3 chr2 24844807 24845195 -228411388 + L1ME1 LINE L1 4163 4566 -1580 689 231 0 0 chr2 24845297 24845431 -228411152 + AluJo SINE Alu 1 134 -178 1398 218 35 33 chr2 24845500 24845656 -228410927 + L1ME1 LINE L1 4680 4834 -1312 273 29 0 0 chr2 24845656 24845690 -228410893 + (TG)n Simple_repeat Simple_repeat 2 35 0 1398 218 35 33 chr2 24845690 24845956 -228410627 + L1ME1 LINE L1 4834 5103 -1043 2300 101 13 0 chr2 24845971 24846278 -228410305 - AluSp SINE Alu -2 311 1 487 196 34 27 chr2 24846282 24846430 -228410153 + L1MB8 LINE L1 6030 6178 0 * 1779 197 70 40 chr2 24846425 24846943 -228409640 + L1ME1 LINE L1 5590 6122 -44 490 194 76 0 chr2 24846844 24846988 -228409595 + L1MA10 LINE L1 6180 6334 0 * 414 355 125 5 chr2 24847455 24847863 -228408720 - L2 LINE L2 -812 2502 2046 793 242 112 40 chr2 24848009 24848464 -228408119 + HAL1 LINE L1 2020 2507 0 2306 88 14 0 chr2 24849465 24849762 -228406821 - AluSx SINE Alu -11 301 1 1743 187 7 3 chr2 24850168 24850452 -228406131 + AluJo SINE Alu 3 287 -25 201 389 74 25 chr2 24850583 24850827 -228405756 - L2 LINE L2 -189 3083 2828 946 294 94 55 chr2 24850881 24851548 -228405035 - L2 LINE L2 -557 2757 2065 190 331 120 14 chr2 24851565 24851707 -228404876 - L2 LINE L2 -1411 1903 1747 225 261 15 0 chr2 24851820 24851885 -228404698 + GA-rich Low_complexity Low_complexity 5 70 0 2159 138 0 0 chr2 24852631 24852935 -228403648 + AluJb SINE Alu 1 304 -8 1862 152 3 10 chr2 24853056 24853353 -228403230 - AluJb SINE Alu -17 295 1 277 259 30 74 chr2 24853580 24853715 -228402868 + L2 LINE L2 3184 3312 -1 315 374 116 0 chr2 24853942 24854089 -228402494 + MIR3 SINE MIR 38 201 -7 180 0 0 0 chr2 24854142 24854162 -228402421 + (ATTG)n Simple_repeat Simple_repeat 2 21 0 2205 94 0 14 chr2 24854162 24854313 -228402270 - AluSx SINE Alu -28 284 137 2342 75 0 10 chr2 24854313 24854607 -228401976 - AluSp SINE Alu -9 304 14 2205 94 0 14 chr2 24854607 24854743 -228401840 - AluSx SINE Alu -175 137 1 2129 135 3 0 chr2 24854744 24855041 -228401542 - AluSx SINE Alu -14 298 1 431 305 85 10 chr2 24855283 24855483 -228401100 - L3 LINE CR1 -117 1460 1246 25 51 0 0 chr2 24855526 24855565 -228401018 + AT_rich Low_complexity Low_complexity 1 39 0 25 0 0 0 chr2 24855732 24855757 -228400826 + AT_rich Low_complexity Low_complexity 1 25 0 249 83 0 0 chr2 24855916 24855952 -228400631 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 207 367 235 14 chr2 24856645 24857007 -228399576 - L2 LINE L2 -15 3257 2816 331 206 16 0 chr2 24857305 24857368 -228399215 - L2 LINE L2 -2 3311 3248 182 262 0 0 chr2 24857541 24857583 -228399000 + MIR SINE MIR 98 139 -123 783 153 74 45 chr2 24858468 24858710 -228397873 - Charlie1a DNA MER1_type 0 1455 1207 1014 195 0 3 chr2 24858720 24859058 -228397525 + (TA)n Simple_repeat Simple_repeat 1 338 0 1973 125 56 0 chr2 24859058 24859345 -228397238 - AluSq SINE Alu -10 303 1 977 70 0 0 chr2 24859345 24859460 -228397123 - AluSq/x SINE Alu -177 135 21 4896 197 61 7 chr2 24859460 24860595 -228395988 - Charlie1a DNA MER1_type -259 1196 1 981 225 41 0 chr2 24860601 24860819 -228395764 + MIR SINE MIR 34 260 -2 21 0 0 0 chr2 24861036 24861057 -228395526 + AT_rich Low_complexity Low_complexity 1 21 0 315 254 155 35 chr2 24861787 24861929 -228394654 - L1ME4a LINE L1 -7 6114 5956 1965 223 80 17 chr2 24862865 24863381 -228393202 - MER77 LTR ERV1 -4 601 54 34 0 0 0 chr2 24863954 24863988 -228392595 + AT_rich Low_complexity Low_complexity 1 34 0 1890 162 3 7 chr2 24864608 24864910 -228391673 + AluJb SINE Alu 1 301 -11 21 0 0 0 chr2 24865027 24865048 -228391535 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr2 24865317 24865347 -228391236 + AT_rich Low_complexity Low_complexity 1 30 0 860 211 57 0 chr2 24866387 24866581 -228390002 + MER3 DNA MER1_type 1 205 -4 1121 189 205 8 chr2 24866645 24866894 -228389689 + AluJo SINE Alu 1 298 -4 256 291 131 78 chr2 24867048 24867316 -228389267 - L2 LINE L2 0 3272 2991 28 91 0 0 chr2 24870981 24871058 -228385525 + AT_rich Low_complexity Low_complexity 1 77 0 266 335 79 93 chr2 24872037 24872327 -228384256 - L2 LINE L2 -4 3268 2983 572 276 90 0 chr2 24872475 24872631 -228383952 - MER5B DNA MER1_type 0 178 9 200 304 265 16 chr2 24872603 24872856 -228383727 - L2 LINE L2 -715 2599 2284 * 382 285 131 8 chr2 24873190 24873320 -228383263 - MIR SINE MIR -110 152 7 1800 136 7 23 chr2 24873402 24873530 -228383053 + AluJb SINE Alu 11 140 -172 198 0 0 0 chr2 24873530 24873552 -228383031 + (TAGA)n Simple_repeat Simple_repeat 2 23 0 1800 136 7 23 chr2 24873552 24873724 -228382859 + AluJb SINE Alu 140 306 -6 3969 153 60 13 chr2 24873880 24874714 -228381869 - L1MB7 LINE L1 -9 6175 5299 6371 158 26 18 chr2 24874724 24876419 -228380164 - L1MC1 LINE L1 0 6333 4633 269 290 169 8 chr2 24876587 24876711 -228379872 + MIR SINE MIR 98 241 -21 295 290 48 0 chr2 24876781 24876843 -228379740 - MIR SINE MIR -184 78 14 2642 259 100 36 chr2 24879039 24879595 -228376988 - L2 LINE L2 -7 3306 2787 2379 101 0 0 chr2 24879595 24879902 -228376681 - AluSq SINE Alu -6 307 1 2642 259 100 36 chr2 24879902 24880631 -228375952 - L2 LINE L2 -526 2787 1939 2037 142 0 13 chr2 24880782 24881085 -228375498 - AluSx SINE Alu -13 299 1 367 254 144 77 chr2 24881097 24881650 -228374933 - L1MCa LINE L1 -3454 2972 2337 312 282 9 0 chr2 24882021 24882131 -228374452 - L1MCa LINE L1 -4577 1849 1739 715 250 76 94 chr2 24882307 24882501 -228374082 - L1MCa LINE L1 -4887 1529 1333 1885 93 12 4 chr2 24882501 24882749 -228373834 - AluSq SINE Alu -63 250 1 715 250 76 94 chr2 24882749 24883242 -228373341 - L1MCa LINE L1 -5083 1333 855 1560 115 0 0 chr2 24883246 24883454 -228373129 - AluSg/x SINE Alu -4 306 99 590 113 0 0 chr2 24883799 24883879 -228372704 - AluS SINE Alu -233 80 1 304 282 17 86 chr2 24884008 24884182 -228372401 - LTR33 LTR ERVL -344 177 16 277 303 76 0 chr2 24884567 24884712 -228371871 + MER103 DNA DNA 3 158 -8 181 320 184 38 chr2 24884887 24885447 -228371136 - L2 LINE L2 -1347 1967 1326 2231 85 14 0 chr2 24885458 24885751 -228370832 + AluSx SINE Alu 1 297 -15 356 221 71 0 chr2 24886073 24886186 -228370397 - MER113 DNA MER1_type? -400 121 1 398 145 8 46 chr2 24886474 24886605 -228369978 + CT-rich Low_complexity Low_complexity 3 128 0 222 37 0 0 chr2 24886611 24886638 -228369945 + (TCCCC)n Simple_repeat Simple_repeat 5 31 0 1729 150 10 27 chr2 24886678 24886971 -228369612 - AluJo SINE Alu -4 308 21 2421 142 29 44 chr2 24887345 24887415 -228369168 - MER65A LTR ERV1 0 445 375 2365 94 3 3 chr2 24887415 24887724 -228368859 + AluSx SINE Alu 3 311 -1 2421 142 29 44 chr2 24887724 24888104 -228368479 - MER65A LTR ERV1 -70 375 2 2418 79 0 19 chr2 24888107 24888423 -228368160 - AluY SINE Alu -1 310 1 396 174 229 60 chr2 24888775 24888976 -228367607 + MER112 DNA MER1_type 10 244 -16 219 352 48 9 chr2 24890364 24890469 -228366114 + L2 LINE L2 3122 3230 -42 299 304 79 1 chr2 24891606 24891735 -228364848 + MIR SINE MIR 31 166 -65 1216 93 0 0 chr2 24893126 24893288 -228363295 - AluY SINE Alu -17 294 133 2322 68 3 0 chr2 24893288 24893584 -228362999 - AluY SINE Alu -14 297 1 1992 127 7 10 chr2 24893606 24893914 -228362669 - AluJo SINE Alu -5 307 1 2246 106 0 0 chr2 24894702 24895003 -228361580 - AluSx SINE Alu -11 301 1 303 244 54 95 chr2 24895506 24895674 -228360909 + L1MEd LINE L1 750 910 -5209 230 304 98 66 chr2 24895816 24896254 -228360329 + L1M4 LINE L1 3365 3816 -2330 460 246 32 24 chr2 24896273 24896399 -228360184 + MIR SINE MIR 34 160 -102 26 0 0 0 chr2 24897463 24897489 -228359094 + AT_rich Low_complexity Low_complexity 1 26 0 667 237 89 8 chr2 24898497 24898785 -228357798 - MER46C DNA MER2_type 0 338 4 236 304 38 13 chr2 24899274 24899353 -228357230 + L2 LINE L2 3152 3232 -40 1932 117 0 13 chr2 24899743 24900043 -228356540 - AluSx SINE Alu 0 312 17 568 279 131 27 chr2 24904390 24904612 -228351971 + MIR SINE MIR 18 262 0 286 269 117 80 chr2 24904650 24904974 -228351609 - L2 LINE L2 -33 3239 2904 1889 113 0 0 chr2 24905236 24905501 -228351082 - AluSx SINE Alu -25 287 23 410 286 113 0 chr2 24907675 24907808 -228348775 + MIR3 SINE MIR 20 167 -41 2383 85 0 0 chr2 24907938 24908245 -228348338 - AluSx SINE Alu -5 307 1 186 296 0 0 chr2 24909483 24909527 -228347056 + L2 LINE L2 3210 3253 -19 500 262 84 69 chr2 24910060 24910465 -228346118 + MLT1J1 LTR MaLR 5 415 -31 1374 152 18 72 chr2 24910520 24910888 -228345695 + L1MA9 LINE L1 5131 5496 -743 1556 150 62 126 chr2 24911006 24911305 -228345278 + LTR10A LTR ERV1 185 447 -162 2229 78 3 0 chr2 24911305 24911588 -228344995 + AluY SINE Alu 1 284 -27 1556 150 62 126 chr2 24911588 24911742 -228344841 + LTR10A LTR ERV1 447 609 0 37094 33 3 1 chr2 24911747 24916962 -228339621 + L1PA4 LINE L1 926 6152 -3 2719 153 23 50 chr2 24916982 24917389 -228339194 + L1MA9 LINE L1 5524 5914 -398 4015 91 16 4 chr2 24917389 24917936 -228338647 + MER41A LTR ERV1 1 554 0 2719 153 23 50 chr2 24917936 24918084 -228338499 + L1MA9 LINE L1 5914 6064 -248 3379 113 87 4 chr2 24918104 24918644 -228337939 + MER51C LTR ERV1 45 629 -11 1033 204 33 0 chr2 24918653 24918864 -228337719 + L1MA9 LINE L1 6050 6267 -45 357 261 148 0 chr2 24920767 24920882 -228335701 - L2 LINE L2 0 3313 3182 409 262 182 14 chr2 24921080 24921294 -228335289 - L2 LINE L2 -471 2843 2594 1014 110 86 0 chr2 24921974 24922137 -228334446 + L1PA10 LINE L1 5991 6167 -1 706 240 142 20 chr2 24922138 24922686 -228333897 + L1ME3 LINE L1 1306 1895 -4645 2157 153 65 28 chr2 24922686 24923116 -228333467 + L1MC1 LINE L1 5888 6333 0 706 240 142 20 chr2 24923116 24923151 -228333432 + L1ME3 LINE L1 1895 1924 -4616 234 290 84 47 chr2 24923204 24923418 -228333165 + L1MC5 LINE L1 7706 7927 -34 907 263 103 23 chr2 24923419 24923449 -228333134 + L1ME3 LINE L1 4230 4256 -2284 1837 137 11 11 chr2 24923449 24923757 -228332826 + AluSx SINE Alu 1 308 0 907 263 103 23 chr2 24923757 24924088 -228332495 + L1ME3 LINE L1 4256 4657 -1883 1958 92 96 0 chr2 24924088 24924360 -228332223 + AluSx SINE Alu 1 298 -14 907 263 103 23 chr2 24924360 24924566 -228332017 + L1ME3 LINE L1 4657 4845 -1695 609 188 194 7 chr2 24924570 24924714 -228331869 - MER20 DNA MER1_type -4 215 45 804 122 3 16 chr2 24924737 24924880 -228331703 + L1ME3 LINE L1 4860 5003 -1537 315 47 0 0 chr2 24924883 24924926 -228331657 + MADE1 DNA Mariner 1 43 -37 356 292 44 13 chr2 24925036 24925262 -228331321 + L1ME3 LINE L1 5196 5428 -1112 2237 91 0 7 chr2 24925265 24925561 -228331022 + AluSc SINE Alu 1 294 -15 385 113 0 0 chr2 24925643 24925718 -228330865 + AluS SINE Alu 231 305 0 581 216 41 26 chr2 24925754 24925948 -228330635 + L1ME3 LINE L1 6103 6299 -265 2200 101 7 0 chr2 24925993 24926290 -228330293 - AluSx SINE Alu -13 299 1 236 250 26 0 chr2 24926321 24926397 -228330186 + L1ME3 LINE L1 6273 6350 -206 1036 149 14 59 chr2 24927170 24927391 -228329192 + L1PA16 LINE L1 5955 6165 -1 2013 125 0 13 chr2 24928702 24929005 -228327578 + AluSp SINE Alu 1 299 -14 820 348 165 11 chr2 24929155 24929814 -228326769 - L3 LINE CR1 -1 1576 816 1549 169 18 0 chr2 24929943 24930215 -228326368 - AluJb SINE Alu -35 277 1 548 255 149 70 chr2 24930505 24930869 -228325714 + MLT1L LTR MaLR 110 564 -50 1599 141 4 36 chr2 24931794 24932070 -228324513 - AluJo SINE Alu -10 302 36 1933 146 7 0 chr2 24932929 24933230 -228323353 - AluSx SINE Alu -9 303 1 812 180 7 0 chr2 24933874 24934024 -228322559 + FRAM SINE Alu 1 151 -25 262 225 54 54 chr2 24935759 24935888 -228320695 + L1MC5 LINE L1 7546 7674 -287 * 347 123 18 0 chr2 24935881 24935938 -228320645 - L1MD1 LINE L1 -122 6120 6063 1404 217 68 25 chr2 24935983 24936623 -228319960 - L1MDa LINE L1 -4952 1588 857 188 331 38 68 chr2 24936681 24936814 -228319769 + L2 LINE L2 3142 3270 -2 366 252 165 9 chr2 24937197 24937312 -228319271 + L2 LINE L2 3138 3270 -2 1647 174 17 0 chr2 24937553 24937846 -228318737 + AluJb SINE Alu 1 298 -14 1921 122 0 13 chr2 24938361 24938664 -228317919 - AluSx SINE Alu -13 299 1 458 275 0 47 chr2 24939177 24939348 -228317235 + L1MC5 LINE L1 7747 7909 -52 2115 118 3 10 chr2 24939382 24939696 -228316887 + AluJb SINE Alu 1 312 0 1667 125 0 0 chr2 24940247 24940479 -228316104 - AluSx SINE Alu -17 295 64 480 34 0 0 chr2 24940493 24940552 -228316031 + AluJ/FLAM SINE Alu 42 100 -212 343 111 0 19 chr2 24940552 24940606 -228315977 - Alu SINE Alu -246 53 1 2166 266 138 11 chr2 24941390 24942288 -228314295 + L2 LINE L2 1325 2336 -978 919 318 42 19 chr2 24943394 24943869 -228312714 + L2 LINE L2 2813 3298 -15 255 161 0 0 chr2 24944276 24944332 -228312251 + (TA)n Simple_repeat Simple_repeat 1 56 0 2209 108 3 3 chr2 24944332 24944628 -228311955 - AluSp SINE Alu -17 296 1 21 0 0 0 chr2 24946247 24946268 -228310315 + AT_rich Low_complexity Low_complexity 1 21 0 3708 168 25 3 chr2 24947296 24947932 -228308651 - L1MB7 LINE L1 -10 6174 5525 2360 106 0 0 chr2 24948267 24948570 -228308013 - AluSx SINE Alu -9 303 1 1793 160 13 19 chr2 24948909 24949222 -228307361 - AluJb SINE Alu 0 312 2 431 304 77 44 chr2 24949801 24950097 -228306486 + HAL1 LINE L1 1088 1409 -1098 1937 168 0 9 chr2 24950097 24950412 -228306171 + AluJb SINE Alu 1 312 0 431 304 77 44 chr2 24950412 24950619 -228305964 + HAL1 LINE L1 1409 1608 -899 27 0 0 0 chr2 24950840 24950867 -228305716 + AT_rich Low_complexity Low_complexity 1 27 0 1906 218 62 24 chr2 24951118 24951568 -228305015 + MLT1C LTR MaLR 1 467 0 705 226 28 50 chr2 24952515 24952635 -228303948 - MER5B DNA MER1_type -1 177 61 2301 105 0 0 chr2 24952635 24952931 -228303652 - AluSx SINE Alu -16 296 1 705 226 28 50 chr2 24952931 24952991 -228303592 - MER5B DNA MER1_type -117 61 1 206 254 0 17 chr2 24953025 24953084 -228303499 + MIR SINE MIR 150 207 -55 1874 228 45 14 chr2 24953096 24953601 -228302982 + L1M4 LINE L1 2684 3204 -2942 183 160 60 60 chr2 24953624 24953674 -228302909 + MIR SINE MIR 212 261 -1 2181 111 0 3 chr2 24953738 24954036 -228302547 - AluSq SINE Alu -16 297 1 2412 81 3 0 chr2 24954547 24954854 -228301729 + AluSq SINE Alu 1 308 -5 252 0 0 0 chr2 24954854 24954882 -228301701 + (TA)n Simple_repeat Simple_repeat 2 29 0 946 141 65 109 chr2 24955494 24955742 -228300841 + L1MCc LINE L1 13 249 -6174 1230 208 0 25 chr2 24955774 24956058 -228300525 + L1M4 LINE L1 5113 5389 -757 18186 124 58 91 chr2 24956092 24958220 -228298363 + L1M1 LINE L1 16 2214 -5351 2352 107 0 0 chr2 24958220 24958528 -228298055 + AluSx SINE Alu 3 310 -2 1137 130 0 6 chr2 24958528 24958697 -228297886 + AluSg/x SINE Alu 126 293 -19 585 62 0 82 chr2 24958697 24958794 -228297789 + MER30 DNA MER1_type 52 140 -90 2244 107 0 16 chr2 24958795 24959112 -228297471 + AluSx SINE Alu 1 312 0 18186 124 58 91 chr2 24959112 24959662 -228296921 + L1M1 LINE L1 2212 2779 -4786 2073 148 7 0 chr2 24959662 24959972 -228296611 + AluSx SINE Alu 1 312 0 18186 124 58 91 chr2 24959972 24960552 -228296031 + L1M1 LINE L1 2779 3425 -4140 332 167 17 17 chr2 24960578 24960638 -228295945 - LTR45 LTR ERV1 -25 500 441 6252 108 9 8 chr2 24960638 24960654 -228295929 + L1MA2 LINE L1 5420 5434 -870 2008 123 74 0 chr2 24960654 24960938 -228295645 + AluSx SINE Alu 1 305 -7 6252 108 9 8 chr2 24960938 24961804 -228294779 + L1MA2 LINE L1 5434 6303 -1 3045 225 51 46 chr2 24961844 24963156 -228293427 + L1MCc LINE L1 734 2068 -4873 237 88 0 0 chr2 24963166 24963200 -228293383 + Alu SINE Alu 264 297 -5 22 0 0 0 chr2 24963779 24963801 -228292782 + AT_rich Low_complexity Low_complexity 1 22 0 2186 78 58 3 chr2 24964398 24964692 -228291891 + AluY SINE Alu 1 310 -1 4151 188 198 0 chr2 24964761 24965743 -228290840 - L1M2 LINE L1 -5109 1740 565 1158 131 16 6 chr2 24965777 24965960 -228290623 - L1M2 LINE L1 -6659 190 6 1521 141 65 4 chr2 24965963 24966225 -228290358 - AluJo SINE Alu -32 280 3 942 122 95 0 chr2 24966373 24966521 -228290062 - AluSc SINE Alu -14 295 134 5460 146 66 32 chr2 24966555 24966893 -228289690 - Charlie1 DNA MER1_type -62 2699 2374 2345 75 26 7 chr2 24966893 24967014 -228289569 + AluY SINE Alu 1 118 -193 207 0 0 0 chr2 24967014 24967037 -228289546 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2345 75 26 7 chr2 24967037 24967220 -228289363 + AluY SINE Alu 118 311 0 5460 146 66 32 chr2 24967220 24967946 -228288637 - Charlie1 DNA MER1_type -387 2374 1599 2339 61 10 14 chr2 24968709 24968843 -228287740 + AluSg SINE Alu 1 134 -176 2404 80 0 3 chr2 24968843 24969145 -228287438 + AluY SINE Alu 1 301 -10 2339 61 10 14 chr2 24969145 24969303 -228287280 + AluSg SINE Alu 134 292 -18 2262 101 0 20 chr2 24969401 24969707 -228286876 - AluSx SINE Alu -12 300 1 973 141 52 5 chr2 24969719 24969910 -228286673 + L1MA8 LINE L1 6056 6255 -36 2233 116 0 0 chr2 24969910 24970213 -228286370 + AluSx SINE Alu 1 303 -9 224 219 172 0 chr2 24970225 24970289 -228286294 + MIR SINE MIR 64 138 -124 266 242 65 59 chr2 24970497 24970683 -228285900 + L1ME4a LINE L1 5923 6109 -12 2012 112 36 0 chr2 24971426 24971702 -228284881 - AluSx SINE Alu -15 297 12 1993 113 15 0 chr2 24971878 24972152 -228284431 + AluSx SINE Alu 26 303 -9 866 267 52 14 chr2 24972184 24972472 -228284111 + L1MC4a LINE L1 5597 5895 -1913 1475 186 21 48 chr2 24972700 24972845 -228283738 + AluJo SINE Alu 1 136 -176 2209 105 3 13 chr2 24972845 24973149 -228283434 + AluSx SINE Alu 1 301 -11 1475 186 21 48 chr2 24973149 24973293 -228283290 + AluJo SINE Alu 136 282 -30 1111 166 11 0 chr2 24973760 24973935 -228282648 - MSTD LTR MaLR -1 395 219 366 271 236 13 chr2 24973940 24974046 -228282537 - MLT1K LTR MaLR -53 535 454 231 36 0 0 chr2 24974046 24974074 -228282509 + (TC)n Simple_repeat Simple_repeat 1 28 0 366 271 236 13 chr2 24974074 24974196 -228282387 - MLT1K LTR MaLR -134 454 256 252 250 0 31 chr2 24975137 24975201 -228281382 + MLT1L LTR MaLR 3 64 -551 243 273 176 66 chr2 24975257 24975484 -228281099 + MLT1L LTR MaLR 149 400 -215 238 304 20 10 chr2 24975527 24975629 -228280954 + MLT1L LTR MaLR 513 615 0 611 95 9 2 chr2 24975680 24975902 -228280681 + AluSx SINE Alu 1 268 -44 273 374 80 13 chr2 24976178 24976416 -228280167 + L3 LINE CR1 1319 1572 -5 2062 107 0 52 chr2 24976496 24976824 -228279759 - AluSx SINE Alu -1 311 1 288 172 0 17 chr2 24976950 24977008 -228279575 + MLT1L LTR MaLR 550 606 -9 1458 113 13 26 chr2 24977154 24977383 -228279200 + MER1B DNA MER1_type 110 335 -4 2451 70 0 22 chr2 24977383 24977698 -228278885 + AluY SINE Alu 1 308 -3 1536 152 33 63 chr2 24977988 24978291 -228278292 + AluJo SINE Alu 1 294 -18 1044 105 0 0 chr2 24978357 24978490 -228278093 + AluSq/x SINE Alu 1 133 -180 2133 103 20 3 chr2 24978492 24978792 -228277791 + AluSg SINE Alu 1 305 -5 190 278 56 0 chr2 24978794 24978848 -228277735 - MER5A DNA MER1_type -53 136 80 2125 110 0 10 chr2 24979130 24979422 -228277161 + AluY SINE Alu 1 289 -22 404 274 185 45 chr2 24980699 24981078 -228275505 + L2 LINE L2 2027 2458 -856 484 235 119 68 chr2 24981089 24981518 -228275065 + L1ME4a LINE L1 5660 6110 -11 36 53 0 0 chr2 24983128 24983185 -228273398 + AT_rich Low_complexity Low_complexity 1 57 0 2289 86 3 17 chr2 24983673 24983975 -228272608 + AluSp SINE Alu 1 298 -15 1954 92 0 95 chr2 24984642 24984967 -228271616 - AluSq SINE Alu -19 294 1 1086 209 29 5 chr2 24985439 24985649 -228270934 - MER20 DNA MER1_type -4 215 1 416 281 155 28 chr2 24985656 24986016 -228270567 - L1MC/D LINE L1 -552 5569 5290 211 300 0 14 chr2 24986118 24986188 -228270395 + (TATATG)n Simple_repeat Simple_repeat 2 70 0 842 287 24 31 chr2 24986737 24986774 -228269809 + Charlie1a DNA MER1_type 6 42 -2719 2045 148 64 29 chr2 24986774 24987151 -228269432 - MLT1B LTR MaLR 0 390 1 842 287 24 31 chr2 24987151 24987367 -228269216 + Charlie1a DNA MER1_type 42 257 -1198 258 356 54 64 chr2 24987768 24988063 -228268520 + L2 LINE L2 2685 2976 -338 759 189 0 8 chr2 24988119 24988241 -228268342 + FLAM_C SINE Alu 1 121 -12 320 260 106 57 chr2 24988530 24988653 -228267930 + L2 LINE L2 3143 3271 -1 446 316 51 6 chr2 24988784 24988942 -228267641 - MIR3 SINE MIR -9 199 35 1262 159 71 128 chr2 24989528 24990101 -228266482 - L1MA9 LINE L1 -25 6266 5787 327 65 0 0 chr2 24990101 24990147 -228266436 + (TG)n Simple_repeat Simple_repeat 2 47 0 1262 159 71 128 chr2 24990147 24990250 -228266333 - L1MA9 LINE L1 -504 5787 5680 1969 134 7 10 chr2 24990250 24990548 -228266035 - L1PB3 LINE L1 -1 6153 5857 22069 64 5 8 chr2 24990553 24995929 -228260654 + L1PA6 LINE L1 803 6153 -1 2156 186 37 14 chr2 24995932 24996363 -228260220 - L1MA8 LINE L1 -423 5868 5428 1259 238 3 33 chr2 24997746 24998049 -228258534 + AluJo SINE Alu 1 294 -8 406 280 84 76 chr2 24998050 24998198 -228258385 + L3 LINE CR1 543 695 -882 2179 103 3 0 chr2 24998198 24998498 -228258085 + AluY SINE Alu 1 301 -10 406 280 84 76 chr2 24998498 24998624 -228257959 + L3 LINE CR1 695 819 -758 4509 190 38 20 chr2 24998707 24998735 -228257848 + L1MA9 LINE L1 4928 4954 -1358 1998 154 0 3 chr2 24998735 24999041 -228257542 + AluJb SINE Alu 1 305 -7 4509 190 38 20 chr2 24999041 25000290 -228256293 + L1MA9 LINE L1 4954 6228 -84 988 166 60 10 chr2 25000290 25000489 -228256094 + MER2 DNA MER2_type 2 210 -135 292 109 0 0 chr2 25000597 25000643 -228255940 + L1MA9 LINE L1 6228 6273 -39 320 130 0 19 chr2 25000656 25000710 -228255873 - Alu SINE Alu -8 294 242 21 0 0 0 chr2 25000725 25000746 -228255837 + AT_rich Low_complexity Low_complexity 1 21 0 588 310 64 86 chr2 25001157 25001535 -228255048 + L3 LINE CR1 1028 1396 -181 1987 124 10 7 chr2 25001535 25001834 -228254749 + AluSx SINE Alu 1 300 -12 588 310 64 86 chr2 25001834 25001910 -228254673 + L3 LINE CR1 1396 1472 -105 2168 107 0 7 chr2 25002473 25002764 -228253819 + AluSq SINE Alu 1 289 -24 1574 175 29 16 chr2 25002792 25003088 -228253495 + AluJb SINE Alu 1 303 -9 180 77 0 0 chr2 25003088 25003114 -228253469 + (TAAG)n Simple_repeat Simple_repeat 2 27 0 1574 175 29 16 chr2 25003114 25003125 -228253458 + AluJb SINE Alu 303 312 0 2415 81 0 0 chr2 25003429 25003737 -228252846 - AluSc SINE Alu -1 308 1 2546 65 0 0 chr2 25003748 25004058 -228252525 - AluY SINE Alu -1 310 1 265 282 99 30 chr2 25004903 25005034 -228251549 + L2 LINE L2 3172 3311 -2 678 256 143 74 chr2 25005236 25005446 -228251137 - L2 LINE L2 -1 3312 3118 4222 165 52 8 chr2 25005446 25006270 -228250313 + L1MA9 LINE L1 5449 6308 -4 678 256 143 74 chr2 25006270 25006564 -228250019 - L2 LINE L2 -195 3118 2771 2777 248 43 26 chr2 25006613 25007559 -228249024 - L1ME1 LINE L1 -9 6157 5194 1168 165 25 53 chr2 25007602 25007845 -228248738 - AluJo SINE Alu -76 236 1 997 178 160 17 chr2 25007853 25008204 -228248379 - L1MB8 LINE L1 -1 6177 5765 * 4006 236 34 20 chr2 25008197 25009318 -228247265 - L1MB8 LINE L1 -1294 4852 3716 1574 170 0 18 chr2 25010438 25010715 -228245868 + AluJo SINE Alu 11 282 -30 21 0 0 0 chr2 25010715 25010736 -228245847 + GC_rich Low_complexity Low_complexity 1 21 0 539 283 128 54 chr2 25011340 25011907 -228244676 - L1ME3A LINE L1 -233 5937 5321 * 851 269 97 11 chr2 25011884 25012245 -228244338 - HAL1 LINE L1 -1119 1388 997 379 178 20 20 chr2 25012271 25012372 -228244211 + (TATATG)n Simple_repeat Simple_repeat 3 103 0 478 301 118 16 chr2 25012396 25012582 -228244001 - HAL1 LINE L1 -1575 932 728 630 189 52 13 chr2 25012602 25012755 -228243828 - L1MC4a LINE L1 -1314 6494 6336 * 1420 292 92 39 chr2 25012746 25013411 -228243172 - HAL1 LINE L1 -1804 703 4 225 91 0 0 chr2 25013892 25013925 -228242658 - L1MC4a LINE L1 -1415 6393 6361 403 253 112 28 chr2 25014921 25015099 -228241484 + L1ME3A LINE L1 5649 5841 -329 510 228 239 30 chr2 25015138 25015300 -228241283 + MIR SINE MIR 1 128 -134 2335 65 0 7 chr2 25015300 25015593 -228240990 + AluY SINE Alu 1 291 -20 315 71 0 0 chr2 25015593 25015635 -228240948 + (TA)n Simple_repeat Simple_repeat 2 43 0 510 228 239 30 chr2 25015635 25015668 -228240915 + MIR SINE MIR 127 238 -24 221 370 37 22 chr2 25015697 25015832 -228240751 - L3 LINE CR1 -266 1311 1175 293 359 14 75 chr2 25016570 25016918 -228239665 + L2 LINE L2 2848 3174 -98 2369 90 0 0 chr2 25017126 25017427 -228239156 - AluSq SINE Alu -12 301 1 189 0 0 0 chr2 25018301 25018322 -228238261 + (A)n Simple_repeat Simple_repeat 1 21 0 363 191 217 35 chr2 25018449 25018564 -228238019 - L2 LINE L2 -3 3310 3175 430 99 81 36 chr2 25019222 25019333 -228237250 + L1PA2 LINE L1 6034 6149 -6 716 147 18 43 chr2 25019333 25019488 -228237095 + L1MA5A LINE L1 6135 6293 -4 1641 209 86 87 chr2 25019488 25020243 -228236340 + L1M4 LINE L1 3830 4583 -1563 27 0 0 0 chr2 25020916 25020943 -228235640 + AT_rich Low_complexity Low_complexity 1 27 0 290 320 26 13 chr2 25021636 25021789 -228234794 - Charlie4 DNA MER1_type -1384 577 423 840 227 89 0 chr2 25022103 25022306 -228234277 + MER58A DNA MER1_type 4 224 0 2593 51 0 3 chr2 25022536 25022847 -228233736 - AluY SINE Alu -1 310 1 341 333 83 11 chr2 25022983 25023163 -228233420 + L2 LINE L2 2168 2360 -954 * 404 336 148 38 chr2 25023160 25023553 -228233030 + L2 LINE L2 2837 3272 0 2141 114 3 0 chr2 25023646 25023943 -228232640 + AluSx SINE Alu 1 298 -14 192 219 83 115 chr2 25024004 25024100 -228232483 - MIR SINE MIR -100 108 16 973 101 0 34 chr2 25024115 25024264 -228232319 + L1MC1 LINE L1 6016 6159 -174 359 162 27 0 chr2 25024373 25024447 -228232136 + L1MC1 LINE L1 6258 6333 0 248 91 23 0 chr2 25024464 25024508 -228232075 + (CAA)n Simple_repeat Simple_repeat 1 45 0 1812 152 34 7 chr2 25024713 25025009 -228231574 - AluJo SINE Alu -3 309 6 2402 92 3 0 chr2 25025211 25025517 -228231066 + AluSp SINE Alu 2 308 -5 2160 105 7 20 chr2 25025715 25026021 -228230562 + AluSq SINE Alu 1 302 -11 3560 205 43 47 chr2 25026501 25027556 -228229027 + L1ME1 LINE L1 40 1181 -5215 1170 184 101 14 chr2 25027570 25027848 -228228735 + L1ME1 LINE L1 4632 4933 -1282 986 201 43 39 chr2 25027879 25028158 -228228425 + L1ME1 LINE L1 5877 6156 -79 468 216 36 22 chr2 25028164 25028303 -228228280 + L1MB8 LINE L1 6036 6176 -2 1335 168 84 14 chr2 25028369 25028655 -228227928 - AluSx SINE Alu -6 306 1 5415 88 36 50 chr2 25028655 25029505 -228227078 - L1MA5A LINE L1 -170 6127 5288 195 42 0 0 chr2 25029505 25029529 -228227054 + (TTG)n Simple_repeat Simple_repeat 1 24 0 5415 88 36 50 chr2 25029529 25029564 -228227019 - L1MA5A LINE L1 -1009 5288 5254 1045 252 156 15 chr2 25029577 25030193 -228226390 - L1ME LINE L1 -2297 3783 3081 2267 101 0 3 chr2 25030266 25030563 -228226020 + AluSg SINE Alu 1 296 -14 498 75 0 0 chr2 25030564 25030631 -228225952 + (TA)n Simple_repeat Simple_repeat 2 68 0 1418 253 48 23 chr2 25030657 25031183 -228225400 - L1ME LINE L1 -3169 2911 2373 653 168 80 0 chr2 25031185 25031310 -228225273 + AluJo SINE Alu 1 135 -177 2021 259 82 69 chr2 25031312 25032667 -228223916 - L1ME LINE L1 -3699 2381 1044 414 100 0 0 chr2 25032667 25032727 -228223856 + (TG)n Simple_repeat Simple_repeat 2 61 0 2021 259 82 69 chr2 25032727 25032965 -228223618 - L1ME LINE L1 -5036 1044 810 225 65 0 0 chr2 25032965 25032996 -228223587 + (TA)n Simple_repeat Simple_repeat 2 32 0 2021 259 82 69 chr2 25032996 25033247 -228223336 - L1ME LINE L1 -5270 810 520 2316 204 79 18 chr2 25033247 25033805 -228222778 + L1MD2 LINE L1 5600 6191 -168 784 290 27 53 chr2 25033812 25034150 -228222433 - L1ME LINE L1 -5735 335 7 298 283 33 0 chr2 25035074 25035226 -228221357 + (TA)n Simple_repeat Simple_repeat 2 158 0 401 255 59 39 chr2 25035432 25035585 -228220998 - L1ME3A LINE L1 -6 6164 6009 2272 65 3 59 chr2 25035867 25036189 -228220394 + AluY SINE Alu 1 304 -7 886 152 236 0 chr2 25036261 25036452 -228220131 - MER46A DNA MER2_type 0 236 1 353 241 19 134 chr2 25036787 25037025 -228219558 - L1MC5 LINE L1 -11 8031 7783 618 197 28 84 chr2 25037266 25037444 -228219139 - L1MC4 LINE L1 -376 7666 7499 222 118 0 0 chr2 25037493 25037527 -228219056 + (T)n Simple_repeat Simple_repeat 1 34 0 667 233 51 81 chr2 25038099 25038335 -228218248 + MIR SINE MIR 27 255 -7 354 237 41 10 chr2 25038381 25038478 -228218105 + MIR SINE MIR 133 232 -30 207 200 0 0 chr2 25038736 25038781 -228217802 + (TTA)n Simple_repeat Simple_repeat 2 46 0 2113 107 7 0 chr2 25039086 25039376 -228217207 - AluSg SINE Alu -18 292 1 557 255 7 28 chr2 25039888 25040033 -228216550 - FLAM_A SINE Alu 0 142 1 623 210 20 2 chr2 25041024 25041210 -228215373 + L1M4 LINE L1 809 1170 -5372 * 3411 182 14 77 chr2 25041206 25041602 -228214981 + L1MA9 LINE L1 5121 5540 -772 1347 143 35 9 chr2 25041602 25041832 -228214751 - MER46A DNA MER2_type 0 236 1 3411 182 14 77 chr2 25041832 25042498 -228214085 + L1MA9 LINE L1 5540 6274 -38 2625 165 20 16 chr2 25042510 25043020 -228213563 + L1MB7 LINE L1 5315 5826 -358 263 370 101 0 chr2 25044347 25044466 -228212117 - L2 LINE L2 -5 3267 3137 24 53 0 0 chr2 25044802 25044840 -228211743 + AT_rich Low_complexity Low_complexity 1 38 0 242 329 0 0 chr2 25045247 25045317 -228211266 - L2 LINE L2 -962 2352 2283 1134 299 82 20 chr2 25045403 25045981 -228210602 + L2 LINE L2 2687 3299 -14 592 334 58 37 chr2 25046345 25046612 -228209971 - L2 LINE L2 -529 2785 2508 2654 48 0 0 chr2 25046612 25046921 -228209662 + AluY SINE Alu 1 309 -2 592 334 58 37 chr2 25046921 25046979 -228209604 - L2 LINE L2 -806 2508 2453 253 314 105 9 chr2 25047001 25047106 -228209477 - MIR SINE MIR -125 137 23 4515 142 20 10 chr2 25047140 25047934 -228208649 - L1MA5 LINE L1 -2 6298 5497 795 338 7 83 chr2 25049624 25050083 -228206500 + L2 LINE L2 2845 3268 -4 1240 126 42 42 chr2 25050510 25050725 -228205858 - MER20 DNA MER1_type -4 215 1 21 0 0 0 chr2 25051073 25051094 -228205489 + AT_rich Low_complexity Low_complexity 1 21 0 2062 128 3 7 chr2 25051583 25051879 -228204704 + AluSq SINE Alu 1 295 -18 315 279 80 34 chr2 25051923 25052218 -228204365 - L1M3 LINE L1 -623 5560 5254 424 314 238 12 chr2 25052239 25052580 -228204003 - L1M3 LINE L1 -914 5232 4815 225 350 67 8 chr2 25052935 25053055 -228203528 + L2 LINE L2 3137 3263 -9 194 279 45 63 chr2 25053181 25053292 -228203291 - L2 LINE L2 -8 3305 3197 188 379 64 38 chr2 25053289 25053376 -228203207 + L2 LINE L2 2707 2790 -524 * 596 248 98 49 chr2 25053376 25053591 -228202992 - MIR SINE MIR -1 261 31 1762 175 0 29 chr2 25053591 25053900 -228202683 - AluJo SINE Alu -12 300 1 596 248 98 49 chr2 25053900 25053930 -228202653 - MIR SINE MIR -231 31 4 188 379 64 38 chr2 25053930 25054106 -228202477 + L2 LINE L2 2790 2977 -337 2355 92 3 0 chr2 25055234 25055538 -228201045 + AluSc SINE Alu 1 305 -4 2326 69 0 10 chr2 25056791 25057119 -228199464 - AluY SINE Alu 0 325 1 31 44 0 0 chr2 25057122 25057167 -228199416 + AT_rich Low_complexity Low_complexity 1 45 0 1609 99 9 0 chr2 25057444 25057655 -228198928 - AluSg/x SINE Alu -16 294 82 516 288 58 5 chr2 25057715 25057920 -228198663 + L1MEd LINE L1 587 802 -5317 319 256 12 0 chr2 25057935 25058021 -228198562 + HAL1 LINE L1 146 232 -2275 655 265 191 23 chr2 25058042 25058483 -228198100 + HAL1 LINE L1 586 1100 -1407 1161 241 90 40 chr2 25058512 25058911 -228197672 + L2 LINE L2 2895 3313 0 1800 243 189 41 chr2 25058924 25059988 -228196595 + HAL1 LINE L1 1125 2345 -162 628 280 84 29 chr2 25060054 25060293 -228196290 - MLT1J LTR MaLR -132 379 128 4211 167 33 36 chr2 25060441 25060661 -228195922 + L1MB8 LINE L1 5256 5475 -703 1842 167 7 3 chr2 25060661 25060961 -228195622 + AluJo SINE Alu 1 301 -11 4211 167 33 36 chr2 25060961 25061661 -228194922 + L1MB8 LINE L1 5475 6173 -5 453 328 104 16 chr2 25061760 25062068 -228194515 + L1ME3A LINE L1 5555 5889 -281 648 163 0 0 chr2 25062083 25062181 -228194402 + MER2 DNA MER2_type 1 98 -247 715 220 0 8 chr2 25062181 25062313 -228194270 + FLAM_A SINE Alu 1 131 -2 987 147 82 52 chr2 25062334 25062378 -228194205 + MER2 DNA MER2_type 83 124 -221 2039 131 0 10 chr2 25062378 25062669 -228193914 - AluSx SINE Alu -24 288 1 987 147 82 52 chr2 25062669 25062855 -228193728 + MER2 DNA MER2_type 124 320 -25 1716 188 0 7 chr2 25063204 25063502 -228193081 - AluJo SINE Alu -16 296 1 291 337 10 10 chr2 25063932 25064030 -228192553 + MIR SINE MIR 53 150 -112 22 80 0 0 chr2 25064355 25064405 -228192178 + AT_rich Low_complexity Low_complexity 1 50 0 291 54 0 0 chr2 25064921 25064958 -228191625 + (TG)n Simple_repeat Simple_repeat 2 38 0 2392 61 0 3 chr2 25065016 25065311 -228191272 - AluY SINE Alu -17 294 1 21 0 0 0 chr2 25065319 25065340 -228191243 + AT_rich Low_complexity Low_complexity 1 21 0 262 250 0 0 chr2 25065409 25065461 -228191122 - L2 LINE L2 0 3313 3262 203 321 119 0 chr2 25065463 25065547 -228191036 + MIR SINE MIR 156 249 -13 231 165 114 25 chr2 25066033 25066112 -228190471 - LTR67 LTR ERVL -15 542 457 2111 117 0 0 chr2 25066410 25066728 -228189855 + AluSx SINE Alu 3 320 0 211 310 10 40 chr2 25066744 25066844 -228189739 + L2 LINE L2 2217 2313 -1001 755 131 0 0 chr2 25067114 25067221 -228189362 + U6 snRNA snRNA 1 107 0 2656 186 55 10 chr2 25067224 25067822 -228188761 + L1PA13 LINE L1 1552 2176 -4611 245 125 25 0 chr2 25067822 25067862 -228188721 - MSTA LTR MaLR 0 428 388 2323 103 0 0 chr2 25067867 25068179 -228188404 + AluSx SINE Alu 1 312 0 2359 92 19 0 chr2 25068279 25068832 -228187751 - L1P4 LINE L1 -594 5580 5019 22 35 0 0 chr2 25069425 25069454 -228187129 + AT_rich Low_complexity Low_complexity 1 29 0 329 244 51 32 chr2 25069694 25069850 -228186733 - Charlie7 DNA MER1_type -229 2383 2225 1578 100 0 21 chr2 25069854 25070093 -228186490 - L1M2 LINE L1 -521 5770 5537 1576 189 97 120 chr2 25070123 25070137 -228186446 - Charlie7 DNA MER1_type -378 2234 2221 3044 121 43 15 chr2 25070137 25070675 -228185908 + L1MA8 LINE L1 5735 6287 -4 1576 189 97 120 chr2 25070675 25070898 -228185685 - Charlie7 DNA MER1_type -391 2221 1994 1776 136 4 0 chr2 25070898 25071148 -228185435 + AluSx SINE Alu 1 251 -61 1576 189 97 120 chr2 25071148 25071526 -228185057 - Charlie7 DNA MER1_type -618 1994 1637 2405 63 0 26 chr2 25071526 25071829 -228184754 - AluY SINE Alu -16 295 1 1576 189 97 120 chr2 25071829 25072004 -228184579 - Charlie7 DNA MER1_type -975 1637 1460 547 249 173 14 chr2 25072024 25072301 -228184282 - Charlie7 DNA MER1_type -2291 321 1 21 107 0 0 chr2 25072995 25073079 -228183504 + AT_rich Low_complexity Low_complexity 1 84 0 450 354 44 11 chr2 25073362 25073543 -228183040 + MER91A DNA MER1_type 9 195 -1 335 211 61 79 chr2 25075381 25075495 -228181088 + MIR SINE MIR 11 122 -140 2232 114 0 3 chr2 25075811 25076118 -228180465 - AluSq SINE Alu -7 306 1 6058 100 41 2 chr2 25077174 25077282 -228179301 - L1PA13 LINE L1 0 6163 6061 1866 118 55 71 chr2 25077282 25077663 -228178920 - THE1C LTR MaLR 0 375 1 6058 100 41 2 chr2 25077663 25079219 -228177364 - L1PA13 LINE L1 -102 6061 4469 1808 88 95 29 chr2 25079230 25079503 -228177080 - AluY SINE Alu -19 292 2 2251 118 3 0 chr2 25080186 25080492 -228176091 + AluSg SINE Alu 1 307 -3 196 74 0 0 chr2 25081804 25081831 -228174752 - L3 LINE CR1 -174 1403 1377 2225 65 27 7 chr2 25082673 25082967 -228173616 - AluY SINE Alu -11 300 1 224 232 0 0 chr2 25083452 25083508 -228173075 + (TA)n Simple_repeat Simple_repeat 2 57 0 24 53 0 0 chr2 25083542 25083580 -228173003 + AT_rich Low_complexity Low_complexity 1 38 0 195 323 189 14 chr2 25083694 25083911 -228172672 - L2 LINE L2 -215 3098 2844 42 0 0 0 chr2 25084615 25084657 -228171926 + AT_rich Low_complexity Low_complexity 1 42 0 979 276 29 20 chr2 25086392 25086740 -228169843 + L1ME LINE L1 5414 5764 -406 24 53 0 0 chr2 25086843 25086881 -228169702 + AT_rich Low_complexity Low_complexity 1 38 0 222 37 0 0 chr2 25087994 25088021 -228168562 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 380 395 52 32 chr2 25088022 25088270 -228168313 - L2 LINE L2 -14 3258 3006 327 259 72 70 chr2 25088948 25089062 -228167521 - MER5B DNA MER1_type -60 129 2 206 283 71 61 chr2 25089768 25089842 -228166741 + MER5A DNA MER1_type 90 162 -27 2160 90 7 0 chr2 25089842 25090121 -228166462 + AluSp SINE Alu 1 281 -32 393 22 0 0 chr2 25090123 25090169 -228166414 + (TAA)n Simple_repeat Simple_repeat 1 46 0 206 283 71 61 chr2 25090169 25090190 -228166393 + MER5A DNA MER1_type 162 189 0 257 237 155 10 chr2 25090723 25090820 -228165763 + MER5A DNA MER1_type 3 113 -76 247 267 0 23 chr2 25090914 25091000 -228165583 - MER103 DNA DNA -44 122 39 1788 166 13 20 chr2 25091202 25091503 -228165080 + AluJb SINE Alu 1 299 -13 2014 132 7 0 chr2 25091708 25092004 -228164579 + AluSx SINE Alu 1 298 -14 194 0 39 0 chr2 25092573 25092599 -228163984 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 269 173 0 0 chr2 25094287 25094339 -228162244 + L1MB7 LINE L1 6133 6184 0 2258 105 14 0 chr2 25094473 25094769 -228161814 + AluSx SINE Alu 1 300 -12 183 42 0 0 chr2 25095526 25095550 -228161033 + (TTTTTA)n Simple_repeat Simple_repeat 2 25 0 26 50 0 0 chr2 25096254 25096294 -228160289 + AT_rich Low_complexity Low_complexity 1 40 0 192 326 101 59 chr2 25098742 25099082 -228157501 + L2 LINE L2 2824 3190 -82 754 231 177 9 chr2 25099153 25099695 -228156888 - L1ME LINE L1 -443 5719 5088 * 862 213 7 0 chr2 25099680 25099882 -228156701 + L1ME3 LINE L1 5666 5870 -300 2226 94 7 3 chr2 25100040 25100371 -228156212 - AluSx SINE Alu 0 332 1 369 281 68 14 chr2 25101463 25101609 -228154974 - MER103 DNA DNA -12 154 1 393 294 106 38 chr2 25102062 25102222 -228154361 + MIR3 SINE MIR 10 180 -28 667 263 136 77 chr2 25102359 25102927 -228153656 + HAL1 LINE L1 643 1176 -1331 2181 104 3 7 chr2 25102927 25103216 -228153367 + AluSq SINE Alu 1 288 -25 189 0 0 0 chr2 25103216 25103237 -228153346 + (TTAA)n Simple_repeat Simple_repeat 2 22 0 667 263 136 77 chr2 25103237 25103511 -228153072 + HAL1 LINE L1 1175 1536 -971 2633 301 84 35 chr2 25103530 25105367 -228151216 + L1ME2 LINE L1 36 1962 -4434 2673 234 52 40 chr2 25105467 25105840 -228150743 + L1M4 LINE L1 4229 4596 -1550 2605 46 0 7 chr2 25105840 25106144 -228150439 + AluY SINE Alu 1 302 -9 2673 234 52 40 chr2 25106144 25106728 -228149855 + L1M4 LINE L1 4596 5198 -948 472 228 36 36 chr2 25106719 25106886 -228149697 + L1ME2 LINE L1 3547 3713 -2502 * 2638 145 123 29 chr2 25106877 25107792 -228148791 + L1MC2 LINE L1 5228 6237 -107 1808 213 9 58 chr2 25107773 25107885 -228148698 + L1ME2 LINE L1 5358 5474 -761 * 1862 146 27 10 chr2 25107885 25108179 -228148404 - AluSx SINE Alu -13 299 1 1808 213 9 58 chr2 25108179 25108531 -228148052 + L1ME2 LINE L1 5474 5799 -436 1406 109 43 137 chr2 25108533 25108862 -228147721 + AluYb8 SINE Alu 5 302 -16 1214 127 0 0 chr2 25108862 25109035 -228147548 + AluSg/x SINE Alu 135 307 -3 1225 196 117 50 chr2 25109039 25109441 -228147142 + L1ME2 LINE L1 5796 6224 -9 1447 259 125 35 chr2 25109455 25110325 -228146258 + HAL1 LINE L1 1554 2502 -5 344 326 105 22 chr2 25111736 25111917 -228144666 + L2 LINE L2 1177 1372 -1942 1262 162 63 0 chr2 25111991 25112213 -228144370 - MER46A DNA MER2_type 0 236 1 566 261 162 25 chr2 25113096 25113460 -228143123 - L1MC4a LINE L1 -1643 6165 5752 207 333 95 0 chr2 25113794 25113878 -228142705 - L2 LINE L2 -215 3057 2966 2760 239 40 94 chr2 25113937 25115227 -228141356 + L1MCc LINE L1 17 1237 -5186 2415 167 37 9 chr2 25115349 25115783 -228140800 + LTR45B LTR ERV1 5 491 -40 2875 53 3 3 chr2 25115783 25116138 -228140445 + THE1A LTR MaLR 1 355 0 2415 167 37 9 chr2 25116138 25116169 -228140414 + LTR45B LTR ERV1 491 520 -11 1112 249 74 115 chr2 25116196 25117237 -228139346 + L1MCc LINE L1 1807 2798 -4324 973 130 0 158 chr2 25117237 25117491 -228139092 + MER20 DNA MER1_type 2 215 -4 1112 249 74 115 chr2 25117491 25117591 -228138992 + L1MCc LINE L1 2798 2901 -4221 2353 92 12 0 chr2 25117594 25117919 -228138664 - L1PA10 LINE L1 -556 5612 5284 3669 89 32 2 chr2 25117919 25118440 -228138143 + L1PA10 LINE L1 5616 6157 -11 2078 242 79 17 chr2 25118448 25119305 -228137278 + L1MCc LINE L1 2896 3769 -3172 1093 96 5 70 chr2 25119308 25119495 -228137088 + LTR9 LTR ERV1 438 612 0 2715 170 33 2 chr2 25119510 25119969 -228136614 + HUERS-P3 LTR ERV1 15 487 -8432 447 122 11 44 chr2 25119969 25120059 -228136524 + LTR9 LTR ERV1 440 526 -86 205 43 87 22 chr2 25120060 25120106 -228136477 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 1008 254 115 5 chr2 25120106 25120507 -228136076 + L1MCc LINE L1 3767 4211 -2730 4359 212 65 55 chr2 25120511 25120926 -228135657 + L1MCc LINE L1 4292 4701 -2240 2238 98 7 0 chr2 25120926 25121221 -228135362 + AluSx SINE Alu 2 298 -14 4359 212 65 55 chr2 25121221 25121778 -228134805 + L1MCc LINE L1 4701 5251 -1690 2301 104 3 0 chr2 25121778 25122087 -228134496 + AluY SINE Alu 1 310 -1 329 0 24 0 chr2 25122087 25122128 -228134455 + (TA)n Simple_repeat Simple_repeat 2 43 0 4359 212 65 55 chr2 25122128 25122721 -228133862 + L1MCc LINE L1 5250 5875 -1066 847 208 50 6 chr2 25122750 25122909 -228133674 - MER58A DNA MER1_type 0 167 2 858 209 57 8 chr2 25122919 25123163 -228133420 + L1MCc LINE L1 5881 6136 -805 2133 101 49 0 chr2 25123329 25123615 -228132968 - AluSx SINE Alu -12 300 1 2116 136 48 23 chr2 25123793 25124146 -228132437 + THE1B LTR MaLR 1 362 -2 955 126 13 13 chr2 25124148 25124307 -228132276 + THE1B-int LTR MaLR 1 159 -1421 305 219 159 13 chr2 25124409 25124560 -228132023 + L1M4 LINE L1 5120 5292 -854 1058 141 13 0 chr2 25124574 25124730 -228131853 - AluSg/x SINE Alu -13 299 142 2167 111 0 33 chr2 25124731 25124867 -228131716 + AluSx SINE Alu 1 140 -172 2144 97 10 3 chr2 25124867 25125157 -228131426 + AluSg1 SINE Alu 1 292 -17 2167 111 0 33 chr2 25125157 25125327 -228131256 + AluSx SINE Alu 140 297 -15 748 208 8 0 chr2 25125337 25125467 -228131116 + FLAM_A SINE Alu 1 131 -2 451 299 7 39 chr2 25125823 25125977 -228130606 - MLT1I LTR MaLR -190 219 71 312 167 0 0 chr2 25126479 25126527 -228130056 - AluJ/FLAM SINE Alu -218 84 37 3047 145 199 3 chr2 25126536 25127108 -228129475 - LTR12 LTR ERV1 0 688 5 439 200 27 27 chr2 25127124 25127274 -228129309 - pTR5 LTR ERV1 -1094 1344 1195 326 272 0 0 chr2 25127290 25127393 -228129190 + G-rich Low_complexity Low_complexity 1 103 0 373 249 127 14 chr2 25127479 25127692 -228128891 - pTR5 LTR ERV1 -1257 1181 945 307 282 38 46 chr2 25127970 25128101 -228128482 - L1MEd LINE L1 -5018 1101 972 256 292 135 15 chr2 25128101 25128361 -228128222 - HAL1 LINE L1 -1389 1118 828 304 266 54 109 chr2 25128828 25129012 -228127571 - HAL1 LINE L1 -2333 174 1 385 325 132 16 chr2 25129312 25129555 -228127028 - MARNA DNA Mariner -167 419 149 1339 135 9 22 chr2 25129744 25129966 -228126617 + AluJb SINE Alu 86 304 -8 1015 258 175 35 chr2 25130131 25130732 -228125851 - L1MC4a LINE L1 -1870 5938 5254 314 23 0 23 chr2 25131025 25131069 -228125514 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 2021 139 72 12 chr2 25132209 25132570 -228124013 - MLT1B LTR MaLR -10 644 1 366 23 0 0 chr2 25132664 25132707 -228123876 + (TG)n Simple_repeat Simple_repeat 1 43 0 26 50 0 0 chr2 25132716 25132756 -228123827 + AT_rich Low_complexity Low_complexity 1 40 0 277 211 19 39 chr2 25132813 25132917 -228123666 - L1ME LINE L1 -325 5796 5695 2416 84 0 3 chr2 25133810 25134118 -228122465 + AluSq SINE Alu 1 307 -6 489 234 57 110 chr2 25135793 25136020 -228120563 - MER112 DNA MER1_type -42 218 4 2095 107 3 30 chr2 25136799 25137099 -228119484 - AluSc SINE Alu -17 292 1 318 287 197 47 chr2 25137513 25137699 -228118884 + HAL1 LINE L1 2176 2333 -174 2182 106 0 39 chr2 25137699 25138011 -228118572 + AluSx SINE Alu 1 300 -12 318 287 197 47 chr2 25138011 25138103 -228118480 + HAL1 LINE L1 2333 2496 -11 589 284 38 19 chr2 25138218 25138429 -228118154 + MIR SINE MIR 48 262 0 600 256 46 26 chr2 25139536 25139731 -228116852 - MLT1L LTR MaLR 0 615 417 192 158 0 0 chr2 25139862 25139900 -228116683 + A-rich Low_complexity Low_complexity 1 38 0 243 229 282 58 chr2 25139918 25140106 -228116477 - MLT1L LTR MaLR -380 235 6 2014 134 0 0 chr2 25140414 25140721 -228115862 + AluSx SINE Alu 1 307 0 2383 79 26 0 chr2 25141040 25141344 -228115239 + AluSq SINE Alu 1 312 -1 480 246 185 82 chr2 25141460 25141650 -228114933 + L1M4 LINE L1 4549 4718 -1428 1627 178 10 40 chr2 25141650 25141953 -228114630 + AluJo SINE Alu 1 294 -18 480 246 185 82 chr2 25141953 25142417 -228114166 + L1M4 LINE L1 4718 5270 -876 22 0 0 0 chr2 25142660 25142682 -228113901 + AT_rich Low_complexity Low_complexity 1 22 0 2316 101 3 0 chr2 25143077 25143374 -228113209 + AluSp SINE Alu 1 298 -15 222 354 71 24 chr2 25143535 25143662 -228112921 + L3 LINE CR1 16 148 -1429 268 359 94 52 chr2 25143662 25143808 -228112775 + L3 LINE CR1 1309 1466 -111 1117 178 23 5 chr2 25143808 25144022 -228112561 - MER20 DNA MER1_type 0 219 2 268 359 94 52 chr2 25144022 25144067 -228112516 + L3 LINE CR1 1466 1508 -69 202 284 98 114 chr2 25144686 25145045 -228111538 + L2 LINE L2 2915 3267 -5 23 101 0 0 chr2 25145407 25145486 -228111097 + AT_rich Low_complexity Low_complexity 1 79 0 509 203 101 7 chr2 25145733 25145871 -228110712 - MER103 DNA DNA 0 166 16 326 24 49 0 chr2 25146269 25146343 -228110240 - AluY SINE Alu 0 316 241 1770 142 53 19 chr2 25147394 25147717 -228108866 - MER7A DNA MER2_type 0 346 15 395 152 76 0 chr2 25148297 25148389 -228108194 - L1ME4a LINE L1 -2 6119 6021 248 279 197 14 chr2 25149421 25149568 -228107015 + MIR3 SINE MIR 9 182 -26 1630 141 0 23 chr2 25149594 25149857 -228106726 - AluSx SINE Alu -11 301 45 532 116 74 11 chr2 25151575 25151670 -228104913 + L1MB5 LINE L1 5828 5928 -246 576 296 13 43 chr2 25152532 25152765 -228103818 + L2 LINE L2 987 1212 -2102 2837 244 128 31 chr2 25152770 25154202 -228102381 + L2 LINE L2 1746 3313 0 292 186 279 0 chr2 25154661 25154747 -228101836 - MER103 DNA DNA -53 113 4 2058 106 3 69 chr2 25155268 25155588 -228100995 + AluSp SINE Alu 1 299 -14 263 331 110 12 chr2 25156452 25156615 -228099968 - MER5A DNA MER1_type -4 185 7 265 281 61 0 chr2 25156713 25156795 -228099788 - L2 LINE L2 0 3272 3186 195 42 0 0 chr2 25156910 25156934 -228099649 + (TA)n Simple_repeat Simple_repeat 2 25 0 27 0 0 0 chr2 25157140 25157167 -228099416 + AT_rich Low_complexity Low_complexity 1 27 0 1977 178 0 0 chr2 25157642 25157946 -228098637 - AluJb SINE Alu -8 304 1 2105 126 0 26 chr2 25158016 25158326 -228098257 + AluSg SINE Alu 1 302 -8 4022 234 109 72 chr2 25159122 25159448 -228097135 - L1MEc LINE L1 -4399 1997 1685 2231 92 0 55 chr2 25159448 25159773 -228096810 - AluY SINE Alu -4 307 1 4022 234 109 72 chr2 25159773 25160157 -228096426 - L1MEc LINE L1 -4711 1685 1317 2307 121 0 0 chr2 25160157 25160464 -228096119 - AluSx SINE Alu -5 307 1 4022 234 109 72 chr2 25160464 25161644 -228094939 - L1MEc LINE L1 -5079 1317 35 836 181 93 10 chr2 25161672 25161877 -228094706 - L1ME3A LINE L1 -3 6167 5946 447 302 102 8 chr2 25162154 25162389 -228094194 + MIR SINE MIR 4 260 -2 1455 94 0 5 chr2 25162574 25162766 -228093817 + AluY SINE Alu 1 191 -120 2343 88 3 3 chr2 25162944 25163249 -228093334 - AluSq SINE Alu -8 305 1 697 263 40 9 chr2 25163375 25163599 -228092984 - MIR SINE MIR -12 250 20 188 319 99 11 chr2 25163739 25163830 -228092753 - L2 LINE L2 -211 3061 2963 1953 134 18 0 chr2 25164239 25164516 -228092067 + AluSx SINE Alu 13 294 -18 2311 69 24 10 chr2 25164549 25164840 -228091743 + AluY SINE Alu 1 295 -16 1982 141 3 10 chr2 25165224 25165522 -228091061 - AluSx SINE Alu -11 301 6 320 291 23 40 chr2 25165862 25166037 -228090546 + GA-rich Low_complexity Low_complexity 5 176 0 225 0 0 0 chr2 25167844 25167869 -228088714 + (A)n Simple_repeat Simple_repeat 1 25 0 25 0 0 0 chr2 25168540 25168565 -228088018 + AT_rich Low_complexity Low_complexity 1 25 0 2797 110 60 13 chr2 25170377 25170841 -228085742 - LTR19A LTR ERV1 0 486 1 185 286 16 0 chr2 25171535 25171598 -228084985 - L2 LINE L2 -56 3257 3194 2301 101 7 13 chr2 25172181 25172488 -228084095 + AluSq SINE Alu 1 305 -8 2394 93 0 0 chr2 25172488 25172788 -228083795 + AluSc SINE Alu 1 300 -9 1591 135 82 32 chr2 25173639 25173920 -228082663 - AluJo SINE Alu -17 295 1 198 226 42 48 chr2 25174122 25174216 -228082367 - MIR SINE MIR -65 143 98 2194 110 7 7 chr2 25174314 25174614 -228081969 + AluSx SINE Alu 3 302 -10 643 163 0 0 chr2 25174721 25174819 -228081764 + AluS SINE Alu 2 99 -214 2485 68 0 13 chr2 25175581 25175891 -228080692 + AluY SINE Alu 1 306 -5 1478 211 31 92 chr2 25176283 25176768 -228079815 - LTR9 LTR ERV1 0 612 227 2574 61 0 10 chr2 25176768 25177078 -228079505 - AluY SINE Alu -4 307 1 1478 211 31 92 chr2 25177078 25177292 -228079291 - LTR9 LTR ERV1 -385 227 1 212 0 36 0 chr2 25177294 25177322 -228079261 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1145 177 72 153 chr2 25177619 25177967 -228078616 - MER4C LTR ERV1 0 465 169 1940 145 54 3 chr2 25177967 25178263 -228078320 - AluSx SINE Alu -1 311 1 1145 177 72 153 chr2 25178263 25178417 -228078166 - MER4C LTR ERV1 -296 169 4 2118 105 0 45 chr2 25178808 25179121 -228077462 + AluSx SINE Alu 1 299 -13 2292 80 7 0 chr2 25179551 25179838 -228076745 + AluSg SINE Alu 1 289 -21 1336 260 58 7 chr2 25179908 25180677 -228075906 - L2 LINE L2 -5 3308 2455 635 149 98 11 chr2 25180680 25180854 -228075729 + AluSx SINE Alu 2 190 -122 2484 84 3 0 chr2 25181088 25181399 -228075184 - AluSp SINE Alu -1 312 1 684 332 82 12 chr2 25181480 25181884 -228074699 + L1M4 LINE L1 3798 4229 -1917 2248 98 10 3 chr2 25182697 25182992 -228073591 + AluSc SINE Alu 1 297 -12 2215 129 0 0 chr2 25183623 25183925 -228072658 + AluSx SINE Alu 2 303 -9 718 125 10 0 chr2 25184113 25184217 -228072366 + AluSq SINE Alu 1 105 -208 1863 151 112 19 chr2 25184217 25184629 -228071954 + LTR7 LTR ERV1 1 450 0 1459 117 0 9 chr2 25184629 25184842 -228071741 + AluSq SINE Alu 101 311 -2 505 182 36 9 chr2 25185126 25185236 -228071347 - MER5A DNA MER1_type -76 113 1 2066 107 0 35 chr2 25185459 25185608 -228070975 - AluSg SINE Alu -31 279 143 2411 55 24 3 chr2 25185608 25185897 -228070686 - AluSp SINE Alu -17 296 2 2066 107 0 35 chr2 25185897 25186036 -228070547 - AluSg SINE Alu -167 143 1 472 268 14 21 chr2 25186321 25186463 -228070120 - MIR SINE MIR -115 147 7 1801 107 53 17 chr2 25186520 25186819 -228069764 - L1PA12 LINE L1 0 6168 5859 2383 74 10 0 chr2 25187228 25187524 -228069059 - AluSq SINE Alu -14 299 1 956 128 0 0 chr2 25187816 25187949 -228068634 - AluSq/x SINE Alu -180 133 1 2288 87 0 7 chr2 25188423 25188721 -228067862 + AluSx SINE Alu 1 296 -16 805 208 7 7 chr2 25189054 25189208 -228067375 - FRAM SINE Alu -30 146 1 352 198 58 12 chr2 25189234 25189320 -228067263 + HsTC2 DNA Tc2 1808 1897 -1 2299 112 0 3 chr2 25190152 25190455 -228066128 - AluSx SINE Alu -10 302 1 428 258 225 0 chr2 25190872 25191081 -228065502 + MIR SINE MIR 2 257 -5 298 240 392 9 chr2 25191531 25191748 -228064835 - L1ME4a LINE L1 -2 6119 5820 322 294 38 31 chr2 25191757 25191917 -228064666 - L1ME4a LINE L1 -420 5701 5541 408 215 47 9 chr2 25193561 25193668 -228062915 + MIR SINE MIR 48 158 -104 385 278 46 0 chr2 25195006 25195114 -228061469 + L2 LINE L2 3197 3309 -4 2323 104 0 0 chr2 25195303 25195592 -228060991 + AluSg SINE Alu 1 289 -21 261 250 36 64 chr2 25195604 25195744 -228060839 - L2 LINE L2 -26 3287 3152 970 86 0 43 chr2 25195760 25195899 -228060684 + FLAM_C SINE Alu 1 133 0 1043 259 122 113 chr2 25196226 25197175 -228059408 - L2 LINE L2 -557 2757 1797 942 172 163 0 chr2 25197175 25197378 -228059205 + MER46A DNA MER2_type 1 236 0 1043 259 122 113 chr2 25197378 25197461 -228059122 - L2 LINE L2 -1517 1797 1716 216 216 0 0 chr2 25197485 25197536 -228059047 + (TG)n Simple_repeat Simple_repeat 2 52 0 2429 63 21 0 chr2 25197704 25197991 -228058592 - AluY SINE Alu -18 293 1 2256 84 16 53 chr2 25198207 25198529 -228058054 - AluSx SINE Alu -2 310 1 2080 111 24 0 chr2 25199235 25199523 -228057060 + AluSx SINE Alu 1 295 -17 42460 41 2 0 chr2 25199555 25205702 -228050881 - L1PA4 LINE L1 0 6155 1 576 205 73 13 chr2 25205810 25205961 -228050622 - L1ME LINE L1 -517 5653 5494 229 254 30 15 chr2 25206342 25206409 -228050174 + CT-rich Low_complexity Low_complexity 3 70 0 1939 249 65 41 chr2 25206448 25207432 -228049151 - L1ME3A LINE L1 -109 6455 5447 2171 92 54 3 chr2 25207437 25207732 -228048851 - AluSx SINE Alu -2 310 1 1733 258 64 58 chr2 25207757 25209128 -228047455 - L1ME3A LINE L1 -2168 4372 2993 1206 140 0 0 chr2 25209129 25209293 -228047290 + AluSg/x SINE Alu 134 297 -15 373 202 138 136 chr2 25209295 25209528 -228047055 - L1MEc LINE L1 -3542 2998 2767 762 169 0 22 chr2 25209528 25209664 -228046919 + FLAM_C SINE Alu 1 133 0 373 202 138 136 chr2 25209664 25209735 -228046848 - L1MEc LINE L1 -3773 2767 2698 2442 92 0 0 chr2 25209735 25210038 -228046545 - AluSq SINE Alu -10 303 1 373 202 138 136 chr2 25210038 25210163 -228046420 - L1MEc LINE L1 -3842 2698 2575 2228 128 0 3 chr2 25210163 25210475 -228046108 - AluSx SINE Alu -1 311 1 373 202 138 136 chr2 25210475 25210513 -228046070 - L1MEc LINE L1 -3965 2575 2578 2398 73 3 23 chr2 25210513 25210680 -228045903 - AluSg SINE Alu -13 297 137 2652 64 0 0 chr2 25210680 25210991 -228045592 - AluY SINE Alu 0 311 1 2398 73 3 23 chr2 25210991 25211125 -228045458 - AluSg SINE Alu -173 137 2 373 202 138 136 chr2 25211125 25211202 -228045381 - L1MEc LINE L1 -3961 2579 2504 412 297 100 46 chr2 25211217 25211699 -228044884 - L1MEc LINE L1 -4576 2145 1638 543 251 108 70 chr2 25211700 25212015 -228044568 - L1MEc LINE L1 -4958 1582 1256 198 0 0 0 chr2 25212133 25212155 -228044428 + (T)n Simple_repeat Simple_repeat 1 22 0 2348 105 7 0 chr2 25212194 25212499 -228044084 + AluSx SINE Alu 1 307 -5 246 233 0 0 chr2 25213128 25213188 -228043395 - L1MEc LINE L1 -5974 556 497 258 56 0 0 chr2 25213847 25213883 -228042700 + (CA)n Simple_repeat Simple_repeat 1 36 0 1993 148 11 0 chr2 25214203 25214487 -228042096 + AluJo SINE Alu 15 301 -11 223 244 61 49 chr2 25214599 25214681 -228041902 - L2 LINE L2 -4 3268 3186 21 0 0 0 chr2 25217605 25217626 -228038957 + AT_rich Low_complexity Low_complexity 1 21 0 460 179 232 66 chr2 25222723 25222874 -228033709 - FAM SINE Alu -9 40 1 2219 118 0 10 chr2 25222921 25223225 -228033358 - AluSx SINE Alu -11 301 1 2511 63 3 3 chr2 25223837 25224136 -228032447 + AluSq SINE Alu 1 299 -14 21 36 0 0 chr2 25224562 25224590 -228031993 + GC_rich Low_complexity Low_complexity 1 28 0 1791 129 0 4 chr2 25224591 25224832 -228031751 - AluJb SINE Alu -38 274 35 994 212 110 114 chr2 25225753 25226315 -228030268 - L1ME3A LINE L1 -315 5855 5296 245 314 181 18 chr2 25226011 25226349 -228030234 - L1PA8A LINE L1 -479 5652 5260 * 336 322 72 13 chr2 25226349 25226501 -228030082 - MIR3 SINE MIR -2 206 46 319 326 155 11 chr2 25227567 25227754 -228028829 - MIR SINE MIR -48 214 1 210 360 62 56 chr2 25227777 25227955 -228028628 - L3 LINE CR1 -69 1508 1330 2406 107 0 0 chr2 25228237 25228546 -228028037 - AluSx SINE Alu -3 309 1 2619 45 7 7 chr2 25228642 25228950 -228027633 - AluY SINE Alu -2 309 2 477 270 56 60 chr2 25229187 25229274 -228027309 + MIR SINE MIR 20 106 -156 2422 78 7 0 chr2 25229274 25229568 -228027015 - AluSg SINE Alu -14 296 1 477 270 56 60 chr2 25229568 25229695 -228026888 + MIR SINE MIR 106 233 -29 245 200 0 104 chr2 25231045 25231170 -228025413 + G-rich Low_complexity Low_complexity 3 114 0 210 125 0 54 chr2 25231181 25231237 -228025346 + (CGGGGG)n Simple_repeat Simple_repeat 3 55 0 211 179 0 95 chr2 25231246 25231330 -228025253 + G-rich Low_complexity Low_complexity 2 77 0 205 306 24 0 chr2 25231759 25231844 -228024739 + L2 LINE L2 1864 1950 -1364 1262 304 114 28 chr2 25231866 25232958 -228023625 + L2 LINE L2 2134 3313 0 253 202 64 55 chr2 25233004 25233113 -228023470 - MIR SINE MIR -60 148 39 2364 95 7 0 chr2 25234881 25235177 -228021406 + AluSx SINE Alu 1 298 -14 951 242 127 25 chr2 25236293 25236686 -228019897 - L2 LINE L2 -696 2618 2186 589 66 0 0 chr2 25237123 25237199 -228019384 - MER30 DNA MER1_type -154 76 1 253 0 54 0 chr2 25237628 25237665 -228018918 + (GGGTG)n Simple_repeat Simple_repeat 3 41 0 197 77 0 0 chr2 25237991 25238017 -228018566 + MIR SINE MIR 63 88 -120 2332 93 3 0 chr2 25238169 25238458 -228018125 - AluSx SINE Alu -11 301 12 375 267 7 44 chr2 25239536 25239671 -228016912 - L2 LINE L2 0 3272 3143 236 306 90 0 chr2 25241178 25241289 -228015294 + MIR3 SINE MIR 37 157 -51 1028 209 19 14 chr2 25242420 25242466 -228014117 + MER58A DNA MER1_type 4 48 -2372 1550 176 0 0 chr2 25242466 25242704 -228013879 - AluJb SINE Alu -19 293 56 1028 209 19 14 chr2 25242704 25242867 -228013716 + MER58A DNA MER1_type 48 214 -10 1083 83 7 0 chr2 25244043 25244187 -228012396 + THE1A LTR MaLR 1 145 -210 557 300 100 39 chr2 25244406 25244736 -228011847 + L2 LINE L2 2941 3290 -23 353 221 54 20 chr2 25244911 25245031 -228011552 + MIR SINE MIR 34 154 -54 1071 151 6 6 chr2 25245818 25245984 -228010599 - AluJo SINE Alu -146 166 1 424 339 46 6 chr2 25246719 25246893 -228009690 + MIR3 SINE MIR 25 205 -3 30 0 0 0 chr2 25247061 25247091 -228009492 + AT_rich Low_complexity Low_complexity 1 30 0 1949 119 3 85 chr2 25247098 25247416 -228009167 + AluSq SINE Alu 1 320 0 253 0 0 0 chr2 25247416 25247444 -228009139 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 198 0 0 0 chr2 25247443 25247465 -228009118 + (TG)n Simple_repeat Simple_repeat 1 22 0 * 1546 202 32 7 chr2 25247550 25247832 -228008751 - AluJb SINE Alu -21 291 3 1670 163 9 71 chr2 25247956 25248282 -228008301 + AluJo SINE Alu 5 310 -2 360 220 110 46 chr2 25249015 25249124 -228007459 + MER63 DNA MER1_type 4 745 -91 2516 115 0 0 chr2 25249427 25249739 -228006844 + AluSq SINE Alu 1 312 -1 576 0 0 0 chr2 25249739 25249803 -228006780 + (TA)n Simple_repeat Simple_repeat 2 65 0 224 170 0 21 chr2 25250172 25250219 -228006364 - L2 LINE L2 -4 3309 3264 2341 85 7 3 chr2 25250284 25250577 -228006006 + AluSx SINE Alu 1 294 -18 407 275 81 19 chr2 25250669 25250829 -228005754 - MIR SINE MIR -8 254 85 1256 234 67 44 chr2 25250844 25251280 -228005303 + MLT1C LTR MaLR 14 457 -10 241 282 99 60 chr2 25251373 25251625 -228004958 + L2 LINE L2 2821 3082 -190 186 43 0 0 chr2 25251712 25251735 -228004848 + (TGAA)n Simple_repeat Simple_repeat 4 26 0 375 302 9 0 chr2 25252027 25252133 -228004450 + MLT1L LTR MaLR 470 576 -39 2340 64 41 7 chr2 25252261 25252556 -228004027 + AluY SINE Alu 1 305 -6 2153 129 6 3 chr2 25254522 25254833 -228001750 - AluSx SINE Alu 0 312 1 2251 112 7 0 chr2 25254941 25255236 -228001347 - AluSx SINE Alu -13 299 3 2115 131 0 3 chr2 25255329 25255620 -228000963 + AluSx SINE Alu 1 290 -22 278 196 0 0 chr2 25256467 25256518 -228000065 + L2 LINE L2 3262 3312 -1 463 313 48 45 chr2 25257149 25257462 -227999121 - LTR16C LTR ERVL -18 473 160 310 322 6 17 chr2 25258177 25258357 -227998226 + (TG)n Simple_repeat Simple_repeat 1 178 0 220 267 6 6 chr2 25258372 25258548 -227998035 + (TG)n Simple_repeat Simple_repeat 1 176 0 180 238 0 0 chr2 25258619 25258703 -227997880 + (TG)n Simple_repeat Simple_repeat 1 84 0 407 297 0 6 chr2 25258723 25258888 -227997695 + (TG)n Simple_repeat Simple_repeat 1 164 0 437 316 0 0 chr2 25258903 25259080 -227997503 + (TG)n Simple_repeat Simple_repeat 1 177 0 281 335 0 11 chr2 25259097 25259279 -227997304 + (TG)n Simple_repeat Simple_repeat 1 180 0 208 323 31 31 chr2 25259772 25259899 -227996684 - MIR SINE MIR -99 163 37 875 210 6 2 chr2 25260400 25260599 -227995984 - MLT1D LTR MaLR -327 178 2 2161 110 31 3 chr2 25260801 25261092 -227995491 - AluSx SINE Alu -13 299 1 528 298 44 0 chr2 25261404 25261585 -227994998 - MIR SINE MIR -64 198 10 2467 84 0 0 chr2 25261936 25262246 -227994337 + AluY SINE Alu 1 310 -1 2284 102 0 46 chr2 25262982 25263305 -227993278 + AluSx SINE Alu 1 308 -4 988 26 0 0 chr2 25263516 25263633 -227992950 + THE1A LTR MaLR 239 355 0 11140 87 13 9 chr2 25263633 25265031 -227991552 + THE1A-int LTR MaLR 1 1407 -173 2263 132 0 0 chr2 25265031 25265342 -227991241 - AluSq SINE Alu -2 311 1 11140 87 13 9 chr2 25265342 25265517 -227991066 + THE1A-int LTR MaLR 1407 1580 0 2550 89 14 0 chr2 25265517 25265867 -227990716 + THE1A LTR MaLR 1 355 0 203 253 23 58 chr2 25266474 25266521 -227990062 + MIR SINE MIR 46 90 -172 3770 86 0 4 chr2 25266521 25267034 -227989549 + MER9 LTR ERVK 1 511 0 203 253 23 58 chr2 25267034 25267073 -227989510 + MIR SINE MIR 90 129 -133 250 103 0 0 chr2 25267110 25267149 -227989434 + MIR SINE MIR 205 243 -19 378 308 71 25 chr2 25269036 25269276 -227987307 + L1ME LINE L1 5572 5822 -299 267 306 73 16 chr2 25269883 25270007 -227986576 - MIR SINE MIR -85 177 47 1550 190 136 15 chr2 25270125 25270536 -227986047 + LOR1b LTR ERV1 1 461 0 558 0 0 0 chr2 25271467 25271529 -227985054 + (TG)n Simple_repeat Simple_repeat 2 63 0 2162 107 6 50 chr2 25271929 25272247 -227984336 - AluSx SINE Alu -8 304 1 206 192 77 0 chr2 25272864 25272916 -227983667 + MIR SINE MIR 90 145 -63 197 262 48 29 chr2 25273046 25273149 -227983434 + L3 LINE CR1 770 874 -703 2115 140 0 0 chr2 25273231 25273538 -227983045 + AluSx SINE Alu 3 309 -3 491 317 65 5 chr2 25273677 25273863 -227982720 + L3 LINE CR1 1244 1440 -137 846 157 124 6 chr2 25275961 25276139 -227980444 + MER3 DNA MER1_type 1 199 -10 299 189 0 27 chr2 25276178 25276252 -227980331 + MER117 DNA MER1_type 28 99 -98 239 200 20 0 chr2 25276472 25276522 -227980061 + L2 LINE L2 3184 3234 -38 1238 129 54 42 chr2 25276535 25276775 -227979808 - AluJo SINE Alu -6 306 64 398 289 94 13 chr2 25276827 25276976 -227979607 - Charlie8 DNA MER1_type -2241 176 16 2311 108 3 0 chr2 25279512 25279817 -227976766 + AluSx SINE Alu 1 306 -6 252 287 74 0 chr2 25280453 25280561 -227976022 - MIR SINE MIR -66 196 81 2608 44 0 31 chr2 25280807 25281128 -227975455 + AluY SINE Alu 1 311 0 452 139 70 0 chr2 25281142 25281228 -227975355 + L1MB5 LINE L1 6022 6113 -61 3117 73 20 7 chr2 25281651 25282089 -227974494 + MLT2A1 LTR ERVL 1 444 0 729 160 0 16 chr2 25282100 25282225 -227974358 - FLAM_C SINE Alu -15 128 6 3040 172 56 2 chr2 25282498 25282547 -227974036 + L1MB4 LINE L1 5524 5569 -611 2294 88 10 10 chr2 25282547 25282854 -227973729 + AluSx SINE Alu 1 307 -5 3040 172 56 2 chr2 25282854 25283416 -227973167 + L1MB4 LINE L1 5569 6168 -12 567 258 68 84 chr2 25283439 25283723 -227972860 + L1MC4a LINE L1 5600 5880 -1928 2052 121 11 0 chr2 25283723 25283995 -227972588 + AluSx SINE Alu 21 295 -17 567 258 68 84 chr2 25283995 25284020 -227972563 + L1MC4a LINE L1 5880 5904 -1904 414 0 0 0 chr2 25284030 25284076 -227972507 + (TG)n Simple_repeat Simple_repeat 1 46 0 363 226 47 74 chr2 25284247 25284437 -227972146 + L1ME LINE L1 82 266 -5853 1517 156 53 23 chr2 25284872 25285135 -227971448 + AluJo SINE Alu 42 312 0 624 287 91 33 chr2 25285187 25285843 -227970740 + L1ME LINE L1 792 1475 -4654 809 174 131 24 chr2 25285862 25286149 -227970434 + MSTD LTR MaLR 5 396 0 296 298 153 32 chr2 25286151 25286497 -227970086 + L1ME LINE L1 1533 1920 -4390 1365 263 113 57 chr2 25286571 25286932 -227969651 + L1ME LINE L1 2657 2996 -3133 1532 131 151 4 chr2 25286932 25287191 -227969392 + AluSg SINE Alu 1 297 -13 1365 263 113 57 chr2 25287191 25287275 -227969308 + L1ME LINE L1 2996 3074 -3055 2350 75 0 26 chr2 25287275 25287580 -227969003 + AluY SINE Alu 1 297 -14 1365 263 113 57 chr2 25287580 25287937 -227968646 + L1ME LINE L1 3074 3529 -2600 2118 143 7 0 chr2 25287937 25288244 -227968339 - AluJo SINE Alu -3 309 1 1365 263 113 57 chr2 25288244 25288435 -227968148 + L1ME LINE L1 3529 3708 -2421 2390 93 0 31 chr2 25288569 25288892 -227967691 + AluSq SINE Alu 1 313 0 275 215 101 0 chr2 25288906 25288985 -227967598 - MIR SINE MIR -67 141 55 274 278 62 10 chr2 25289373 25289470 -227967113 - MIR SINE MIR -70 192 91 199 336 136 0 chr2 25293191 25293331 -227963252 - MIR3 SINE MIR -7 201 43 1733 186 11 0 chr2 25294548 25294827 -227961756 - AluJo SINE Alu -30 282 1 190 270 124 0 chr2 25297458 25297547 -227959036 + L2 LINE L2 3179 3278 -35 2202 63 80 14 chr2 25297726 25298012 -227958571 + AluY SINE Alu 1 311 0 208 365 112 18 chr2 25298139 25298309 -227958274 - MIR SINE MIR -55 207 22 2390 91 3 0 chr2 25299269 25299565 -227957018 + AluSx SINE Alu 1 297 -15 289 336 0 24 chr2 25299908 25300033 -227956550 - L2 LINE L2 -258 3055 2934 188 233 0 0 chr2 25300147 25300190 -227956393 + L2 LINE L2 3201 3243 -29 961 184 18 18 chr2 25300297 25300515 -227956068 + MER20 DNA MER1_type 2 219 0 2177 113 0 10 chr2 25301310 25301602 -227954981 + AluSx SINE Alu 1 289 -23 2388 93 0 0 chr2 25301603 25301903 -227954680 + AluSg SINE Alu 1 300 -10 187 276 233 9 chr2 25302719 25302835 -227953748 + MER5A DNA MER1_type 20 161 -28 2521 75 0 3 chr2 25303007 25303312 -227953271 - AluSx SINE Alu -8 304 1 290 336 188 0 chr2 25303740 25303889 -227952694 + MER5B DNA MER1_type 1 177 -1 196 354 164 22 chr2 25304134 25304501 -227952082 + L2 LINE L2 2554 2972 -342 303 292 125 8 chr2 25304636 25304756 -227951827 + L2 LINE L2 3139 3272 0 2202 133 25 5 chr2 25305545 25305913 -227950670 - THE1C LTR MaLR 0 375 1 241 321 148 46 chr2 25306207 25306444 -227950139 + MIR SINE MIR 2 262 0 2391 223 79 37 chr2 25307200 25307261 -227949322 - MER45B DNA AcHobo -306 734 677 2277 116 0 0 chr2 25307261 25307554 -227949029 + AluSx SINE Alu 1 293 -19 2391 223 79 37 chr2 25307554 25308085 -227948498 - MER45B DNA AcHobo -363 677 112 2218 91 3 14 chr2 25308085 25308394 -227948189 + AluSq SINE Alu 1 306 0 2391 223 79 37 chr2 25308394 25308417 -227948166 - MER45B DNA AcHobo -928 112 91 2657 251 69 10 chr2 25308462 25309335 -227947248 - L1MEc LINE L1 -2091 4124 3201 2165 102 17 3 chr2 25309408 25309703 -227946880 - AluSx SINE Alu -13 299 1 3351 185 40 3 chr2 25309726 25310348 -227946235 + Tigger7 DNA MER2_type 1 645 -88 1193 126 31 0 chr2 25310344 25310535 -227946048 + Tigger7 DNA MER2_type 2291 2487 0 * 868 225 88 45 chr2 25310535 25310788 -227945795 - L1MEc LINE L1 -3121 3094 2818 2476 57 3 14 chr2 25310788 25311085 -227945498 - AluY SINE Alu -17 294 1 868 225 88 45 chr2 25311085 25311205 -227945378 - L1MEc LINE L1 -3397 2818 2705 719 188 21 0 chr2 25311208 25311352 -227945231 - L1MEc LINE L1 -3675 2540 2394 207 0 0 0 chr2 25311354 25311377 -227945206 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 923 118 0 0 chr2 25311379 25311498 -227945085 - AluSq/x SINE Alu -194 119 1 230 254 0 0 chr2 25311502 25311565 -227945018 - L1MEc LINE L1 -3824 2391 2329 1161 166 0 21 chr2 25311566 25311759 -227944824 - AluJo SINE Alu -10 302 114 963 141 0 0 chr2 25311761 25311896 -227944687 + AluSg/x SINE Alu 139 273 -39 600 228 0 0 chr2 25311926 25312049 -227944534 - AluJo SINE Alu -187 125 3 2531 253 53 50 chr2 25312050 25312137 -227944446 - L1MEc LINE L1 -4020 2376 2291 1939 143 17 14 chr2 25312137 25312430 -227944153 - AluJb SINE Alu -10 302 9 2531 253 53 50 chr2 25312430 25312736 -227943847 - L1MEc LINE L1 -4105 2291 1987 1613 190 29 26 chr2 25312736 25313047 -227943536 + AluJo SINE Alu 1 312 0 2531 253 53 50 chr2 25313047 25313624 -227942959 - L1MEc LINE L1 -4409 1987 1399 2338 97 7 0 chr2 25313624 25313922 -227942661 - AluSg SINE Alu -10 300 1 2531 253 53 50 chr2 25313922 25314146 -227942437 - L1MEc LINE L1 -4997 1399 1177 1405 176 4 0 chr2 25314148 25314375 -227942208 - AluJb SINE Alu 0 312 85 734 234 31 80 chr2 25314380 25314637 -227941946 - L1MEc LINE L1 -5226 1170 943 2264 113 0 3 chr2 25314637 25314930 -227941653 + AluSg SINE Alu 1 292 -18 734 234 31 80 chr2 25314930 25315120 -227941463 - L1MEc LINE L1 -5453 943 745 788 300 94 38 chr2 25315136 25315616 -227940967 - L1MEc LINE L1 -5868 528 22 426 204 0 0 chr2 25315754 25315847 -227940736 + CT-rich Low_complexity Low_complexity 2 94 0 211 277 0 0 chr2 25316067 25316114 -227940469 + L2 LINE L2 3210 3256 -16 444 293 48 52 chr2 25318751 25318952 -227937631 + L3 LINE CR1 1127 1328 -249 2389 95 0 0 chr2 25318952 25319247 -227937336 + AluSq SINE Alu 11 305 -8 444 293 48 52 chr2 25319247 25319274 -227937309 + L3 LINE CR1 1328 1354 -223 741 192 0 0 chr2 25319827 25319957 -227936626 + FLAM_A SINE Alu 4 133 0 369 0 0 0 chr2 25320195 25320236 -227936347 + (TG)n Simple_repeat Simple_repeat 2 42 0 2091 143 0 0 chr2 25320364 25320658 -227935925 - AluJo SINE Alu -18 294 1 467 302 0 0 chr2 25320658 25320787 -227935796 - L1ME2 LINE L1 -47 6117 5989 1031 90 53 53 chr2 25320834 25321023 -227935560 + Tigger2a DNA MER2_type 2 190 -244 1710 135 0 4 chr2 25321025 25321269 -227935314 + AluJb SINE Alu 1 243 -69 1310 108 0 6 chr2 25321270 25321446 -227935137 + AluSq SINE Alu 129 303 -10 387 147 29 0 chr2 25321446 25321514 -227935069 + Tigger2a DNA MER2_type 365 434 0 292 205 128 0 chr2 25321580 25321658 -227934925 - L1ME1 LINE L1 -20 6146 6059 383 253 47 33 chr2 25321732 25321882 -227934701 + MIR SINE MIR 61 212 -50 413 148 12 0 chr2 25322410 25322491 -227934092 + GA-rich Low_complexity Low_complexity 1 82 0 1917 139 33 0 chr2 25322525 25322822 -227933761 + AluSx SINE Alu 1 306 0 2173 125 17 0 chr2 25322923 25323218 -227933365 - AluSx SINE Alu -12 300 1 2393 98 0 3 chr2 25323406 25323711 -227932872 - AluY SINE Alu -7 304 1 466 229 29 0 chr2 25324050 25324155 -227932428 - MIR SINE MIR -91 171 64 2134 100 7 0 chr2 25324321 25324600 -227931983 + AluSx SINE Alu 20 300 -12 2116 119 44 0 chr2 25325126 25325420 -227931163 + AluSq SINE Alu 1 307 -6 2242 126 3 0 chr2 25325990 25326300 -227930283 + AluSx SINE Alu 1 311 -1 2410 105 0 3 chr2 25326317 25326623 -227929960 + AluSp SINE Alu 1 305 -8 349 288 26 110 chr2 25327171 25327435 -227929148 + L2 LINE L2 2101 2342 -972 363 167 69 135 chr2 25328230 25328476 -227928107 + MLT1G LTR MaLR 241 492 -63 1199 164 43 5 chr2 25328479 25328687 -227927896 - AluJb SINE Alu -10 302 87 353 212 0 0 chr2 25328690 25328756 -227927827 + MLT1G LTR MaLR 530 595 0 2029 112 51 7 chr2 25328929 25329223 -227927360 - AluSc SINE Alu -2 307 1 1486 166 36 62 chr2 25329493 25329645 -227926938 - AluJo SINE Alu -4 308 154 2113 106 41 10 chr2 25329645 25329937 -227926646 + AluSx SINE Alu 3 303 -9 1486 166 36 62 chr2 25329937 25329983 -227926600 - AluJo SINE Alu -158 154 108 189 107 0 0 chr2 25329983 25330011 -227926572 + (TG)n Simple_repeat Simple_repeat 1 28 0 1486 166 36 62 chr2 25330011 25330118 -227926465 - AluJo SINE Alu -204 108 10 493 267 8 15 chr2 25330152 25330283 -227926300 + MIR SINE MIR 22 151 -111 875 158 7 27 chr2 25330460 25330606 -227925977 + FLAM_C SINE Alu 1 143 0 540 81 0 0 chr2 25330830 25330904 -227925679 + (TG)n Simple_repeat Simple_repeat 1 74 0 255 231 0 0 chr2 25331835 25331887 -227924696 + MIR SINE MIR 103 154 -108 272 228 27 87 chr2 25332560 25332678 -227923905 + MIR3 SINE MIR 24 133 -75 2211 113 0 7 chr2 25332678 25332971 -227923612 + AluSq SINE Alu 10 300 -13 272 228 27 87 chr2 25332971 25333001 -227923582 + MIR3 SINE MIR 133 163 -45 2309 108 7 0 chr2 25333814 25334119 -227922464 - AluSx SINE Alu -5 307 1 2416 86 0 0 chr2 25334682 25334973 -227921610 + AluSc SINE Alu 3 293 -16 394 288 69 6 chr2 25335175 25335335 -227921248 + MIR3 SINE MIR 24 193 -15 201 211 83 110 chr2 25336088 25336197 -227920386 - MIR SINE MIR -44 218 113 23 54 0 0 chr2 25338053 25338090 -227918493 + GC_rich Low_complexity Low_complexity 1 37 0 24 67 0 0 chr2 25338261 25338306 -227918277 + GC_rich Low_complexity Low_complexity 1 45 0 23 101 0 0 chr2 25338478 25338557 -227918026 + GC_rich Low_complexity Low_complexity 1 79 0 953 122 0 27 chr2 25338671 25338818 -227917765 + AluJb SINE Alu 170 312 0 2499 85 0 0 chr2 25338831 25339137 -227917446 + AluSc SINE Alu 1 306 -3 832 110 0 0 chr2 25339303 25339412 -227917171 + AluSp/q SINE Alu 189 297 -16 239 0 0 31 chr2 25339412 25339444 -227917139 + (TA)n Simple_repeat Simple_repeat 1 31 0 475 290 35 7 chr2 25339537 25339595 -227916988 + MIR SINE MIR 6 61 -201 1748 162 7 4 chr2 25339595 25339866 -227916717 - AluJb SINE Alu -39 273 2 475 290 35 7 chr2 25339866 25339952 -227916631 + MIR SINE MIR 61 154 -108 2357 95 3 0 chr2 25340044 25340340 -227916243 - AluSc SINE Alu -12 297 1 2370 97 6 3 chr2 25340973 25341284 -227915299 - AluSq SINE Alu -1 312 1 2023 147 0 16 chr2 25341758 25342072 -227914511 - AluSx SINE Alu -3 309 1 611 192 8 8 chr2 25342308 25342433 -227914150 + L2 LINE L2 3189 3313 0 2235 92 0 3 chr2 25342444 25342728 -227913855 - AluSg SINE Alu -27 283 1 2259 95 0 13 chr2 25343448 25343752 -227912831 + AluSg SINE Alu 9 308 -2 186 43 0 0 chr2 25344670 25344693 -227911890 + (T)n Simple_repeat Simple_repeat 1 23 0 777 196 0 0 chr2 25346993 25347126 -227909457 - FLAM_A SINE Alu 0 133 1 245 231 0 0 chr2 25348340 25348392 -227908191 + L2 LINE L2 3221 3272 0 629 244 50 20 chr2 25350214 25350415 -227906168 + L1M4 LINE L1 4572 4778 -1368 2282 119 0 3 chr2 25350883 25351195 -227905388 + AluSx SINE Alu 1 311 -1 373 297 48 0 chr2 25351267 25351411 -227905172 + MIR3 SINE MIR 47 199 -9 28 61 0 0 chr2 25352013 25352062 -227904521 + AT_rich Low_complexity Low_complexity 1 49 0 1939 132 3 20 chr2 25352146 25352442 -227904141 + AluJb SINE Alu 1 291 -21 1068 268 82 66 chr2 25352458 25353240 -227903343 - L1ME4a LINE L1 -14 6107 5313 816 147 23 0 chr2 25353240 25353369 -227903214 - FLAM_A SINE Alu -1 132 1 1068 268 82 66 chr2 25353369 25353388 -227903195 - L1ME4a LINE L1 -808 5313 5296 400 336 186 11 chr2 25354185 25354545 -227902038 + L1MEc LINE L1 474 896 -5929 2453 67 3 0 chr2 25354975 25355272 -227901311 + AluY SINE Alu 1 298 -13 1550 265 85 44 chr2 25355286 25356118 -227900465 + L1MEc LINE L1 1014 2011 -4814 336 228 83 62 chr2 25356994 25357139 -227899444 - MER5A DNA MER1_type -6 183 36 231 263 0 0 chr2 25357176 25357233 -227899350 + CT-rich Low_complexity Low_complexity 2 58 0 1048 184 61 5 chr2 25358799 25359011 -227897572 + MIR SINE MIR 2 225 -37 188 320 136 34 chr2 25359439 25359880 -227896703 + L2 LINE L2 1934 2419 -895 249 263 141 0 chr2 25361598 25361697 -227894886 - L1ME4a LINE L1 -43 6078 5966 2399 68 10 7 chr2 25361757 25362053 -227894530 + AluY SINE Alu 1 297 -14 326 178 78 101 chr2 25362174 25362303 -227894280 + MLT1K LTR MaLR 460 585 -3 509 298 30 0 chr2 25363408 25363576 -227893007 + MIR SINE MIR 89 261 -1 1794 120 10 58 chr2 25363755 25364046 -227892537 + AluJb SINE Alu 1 277 -35 326 205 84 0 chr2 25364131 25364214 -227892369 - MIR SINE MIR -43 219 130 400 256 73 29 chr2 25364588 25364725 -227891858 - MIR SINE MIR -89 173 31 770 205 54 11 chr2 25364835 25365020 -227891563 + L1MD2 LINE L1 6165 6357 -2 1380 154 66 4 chr2 25365033 25365306 -227891277 + AluSx SINE Alu 4 293 -19 13098 116 31 14 chr2 25365562 25367590 -227888993 + Tigger1 DNA MER2_type 89 2151 -267 1245 181 14 113 chr2 25367592 25367688 -227888895 + L1M4 LINE L1 2790 2894 -3252 203 79 26 0 chr2 25367688 25367726 -227888857 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1245 181 14 113 chr2 25367726 25367743 -227888840 + L1M4 LINE L1 2894 2911 -3235 2084 113 18 0 chr2 25367743 25368026 -227888557 - AluSx SINE Alu -24 288 1 1245 181 14 113 chr2 25368026 25368336 -227888247 + L1M4 LINE L1 2911 3172 -2974 1956 125 0 48 chr2 25369058 25369369 -227887214 - AluSp SINE Alu -17 296 1 357 293 134 21 chr2 25369926 25370165 -227886418 + L1ME LINE L1 5366 5631 -490 1243 73 12 0 chr2 25370253 25370418 -227886165 - LTR13 LTR ERVK 0 1007 841 * 1564 54 64 0 chr2 25370410 25370613 -227885970 - LTR13 LTR ERVK -791 216 1 247 286 59 8 chr2 25370757 25370876 -227885707 + L1ME LINE L1 5773 5897 -224 1846 154 17 3 chr2 25370888 25371180 -227885403 + AluJo SINE Alu 1 296 -16 2258 109 6 10 chr2 25371402 25371714 -227884869 + AluSx SINE Alu 1 311 -1 205 296 174 9 chr2 25371792 25371907 -227884676 - MIR SINE MIR -93 169 36 2209 106 11 0 chr2 25372188 25372472 -227884111 - AluSx SINE Alu -25 287 1 259 288 144 19 chr2 25372803 25372963 -227883620 - L2 LINE L2 -11 3302 3123 300 73 0 24 chr2 25372980 25373021 -227883562 + MLT1K LTR MaLR 547 586 -2 2145 125 7 0 chr2 25373377 25373673 -227882910 - AluSg SINE Alu -12 298 1 253 268 21 52 chr2 25373861 25373958 -227882625 + L2 LINE L2 3218 3311 -2 2320 91 3 7 chr2 25374335 25374643 -227881940 + AluSx SINE Alu 1 307 -5 2343 68 0 4 chr2 25374866 25375175 -227881408 - AluSc SINE Alu 0 308 1 2001 136 14 0 chr2 25375179 25375466 -227881117 - AluSx SINE Alu -21 291 1 23 0 0 0 chr2 25375564 25375587 -227880996 + AT_rich Low_complexity Low_complexity 1 23 0 188 316 38 25 chr2 25376250 25376329 -227880254 + MIR SINE MIR 61 140 -122 1286 108 48 0 chr2 25376595 25376781 -227879802 - AluY SINE Alu -116 195 1 726 117 9 0 chr2 25376789 25376900 -227879683 - FLAM_C SINE Alu 0 143 32 332 187 133 0 chr2 25376901 25376976 -227879607 - L1MA9 LINE L1 -69 6243 6159 1312 156 12 56 chr2 25377009 25377259 -227879324 + L1MA9 LINE L1 5712 5950 -362 2106 108 3 26 chr2 25377259 25377564 -227879019 + AluSq SINE Alu 1 298 -15 326 294 69 4 chr2 25377859 25378015 -227878568 + MIR3 SINE MIR 17 189 -19 2135 114 0 39 chr2 25378387 25378694 -227877889 - AluSx SINE Alu -17 295 1 1925 143 14 0 chr2 25379064 25379351 -227877232 + AluSx SINE Alu 1 291 -21 642 121 32 8 chr2 25379362 25379486 -227877097 + GA-rich Low_complexity Low_complexity 2 128 0 1687 140 33 29 chr2 25379498 25379805 -227876778 + AluJb SINE Alu 1 308 -4 621 133 10 0 chr2 25380406 25380504 -227876079 + AluJb SINE Alu 200 298 -14 236 208 0 0 chr2 25380816 25380864 -227875719 + L1ME4a LINE L1 6062 6109 -12 243 0 0 0 chr2 25380922 25380949 -227875634 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 981 85 23 0 chr2 25380949 25381078 -227875505 - AluSc SINE Alu -177 132 1 286 262 60 27 chr2 25381137 25381286 -227875297 - L1M4 LINE L1 -1218 4928 4775 27 0 0 0 chr2 25381303 25381330 -227875253 + AT_rich Low_complexity Low_complexity 1 27 0 291 167 36 83 chr2 25381830 25381914 -227874669 - U14 snRNA snRNA -7 80 1 2165 99 20 7 chr2 25381921 25382215 -227874368 - AluSx SINE Alu -14 298 1 519 283 94 50 chr2 25382251 25382855 -227873728 - L1M4 LINE L1 -1430 4716 4086 2073 108 34 7 chr2 25382897 25383193 -227873390 - AluSx SINE Alu -8 304 1 297 211 0 0 chr2 25383316 25383373 -227873210 - L2 LINE L2 -7 3265 3209 264 261 68 11 chr2 25383416 25383504 -227873079 + MIR SINE MIR 18 110 -98 1433 136 5 5 chr2 25385203 25385423 -227871160 + AluSq SINE Alu 70 289 -24 207 0 0 0 chr2 25385426 25385449 -227871134 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 254 111 0 0 chr2 25385449 25385485 -227871098 - Alu SINE Alu -271 37 2 181 276 171 0 chr2 25385495 25385571 -227871012 + L2 LINE L2 3225 3313 0 2364 87 0 10 chr2 25385714 25386023 -227870560 - AluSg SINE Alu -4 306 1 620 265 70 0 chr2 25386070 25386255 -227870328 - MIR SINE MIR -43 219 22 2264 71 0 18 chr2 25386843 25387124 -227869459 + AluSc SINE Alu 1 276 -33 187 27 27 54 chr2 25387124 25387161 -227869422 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 1915 125 53 4 chr2 25387547 25387828 -227868755 - AluSx SINE Alu -17 295 1 188 278 37 0 chr2 25388323 25388377 -227868206 - MIR SINE MIR -77 131 76 394 269 10 0 chr2 25390135 25390239 -227866344 + MIR3 SINE MIR 81 185 -23 196 274 0 0 chr2 25390338 25390389 -227866194 + MIR SINE MIR 100 150 -112 2359 84 7 10 chr2 25390720 25391019 -227865564 + AluSp SINE Alu 1 298 -15 4392 159 17 77 chr2 25391026 25391255 -227865328 + L1MB3 LINE L1 5135 5376 -807 2085 150 0 7 chr2 25391255 25391562 -227865021 + 7SLRNA srpRNA srpRNA 5 309 -11 4392 159 17 77 chr2 25391562 25391697 -227864886 + L1MB3 LINE L1 5376 5517 -666 2105 121 0 0 chr2 25391697 25391979 -227864604 + AluSx SINE Alu 1 282 -30 4392 159 17 77 chr2 25391979 25392335 -227864248 + L1MB3 LINE L1 5517 5776 -407 1740 123 108 0 chr2 25392335 25392604 -227863979 - AluSx SINE Alu -14 298 1 4392 159 17 77 chr2 25392604 25392931 -227863652 + L1MB3 LINE L1 5776 6121 -62 1429 79 11 5 chr2 25392933 25393122 -227863461 + AluSp SINE Alu 120 309 -4 2344 81 3 17 chr2 25393132 25393430 -227863153 + AluSg SINE Alu 1 294 -16 225 140 0 40 chr2 25393430 25393473 -227863110 + L1MB4 LINE L1 6132 6174 -6 2409 70 0 3 chr2 25393859 25394159 -227862424 + AluY SINE Alu 1 299 -12 1965 116 46 0 chr2 25394348 25394633 -227861950 - AluSx SINE Alu -14 298 1 2385 85 0 7 chr2 25394710 25395016 -227861567 - AluSx SINE Alu -8 304 1 365 226 49 0 chr2 25395092 25395194 -227861389 + L1ME4a LINE L1 5977 6083 -38 23 0 0 0 chr2 25395299 25395322 -227861261 + AT_rich Low_complexity Low_complexity 1 23 0 716 183 109 30 chr2 25395466 25395668 -227860915 + L1ME2 LINE L1 5938 6155 -9 2266 78 3 50 chr2 25396139 25396460 -227860123 - AluSx SINE Alu -6 306 1 654 261 88 9 chr2 25396695 25396921 -227859662 + MIR SINE MIR 13 256 -6 1744 164 0 33 chr2 25398407 25398711 -227857872 - AluJo SINE Alu -18 294 1 943 172 92 6 chr2 25400250 25400424 -227856159 + MER3 DNA MER1_type 21 209 0 283 303 34 46 chr2 25400593 25400641 -227855942 - L1MC4a LINE L1 -1884 5924 5877 1864 89 7 4 chr2 25400641 25400910 -227855673 - AluY SINE Alu 0 311 42 283 303 34 46 chr2 25400910 25401036 -227855547 - L1MC4a LINE L1 -1931 5877 5752 843 99 7 84 chr2 25401056 25401198 -227855385 - FLAM_C SINE Alu -2 131 1 2350 81 0 0 chr2 25401836 25402146 -227854437 - AluY SINE Alu 0 311 2 2103 69 94 0 chr2 25402149 25402426 -227854157 - AluSx SINE Alu -9 303 1 2365 147 21 95 chr2 25402618 25402922 -227853661 - MER66B LTR ERV1 0 486 236 2202 82 0 3 chr2 25402922 25403215 -227853368 - AluY SINE Alu -19 292 1 2365 147 21 95 chr2 25403215 25403435 -227853148 - MER66B LTR ERV1 -250 236 1 2104 113 0 3 chr2 25403477 25403777 -227852806 - AluSx SINE Alu -9 303 5 2334 57 0 0 chr2 25404174 25404478 -227852105 - AluY SINE Alu 0 304 1 2265 94 0 0 chr2 25404478 25404777 -227851806 - AluSg SINE Alu -11 299 1 1912 162 0 3 chr2 25405490 25405798 -227850785 - AluJb SINE Alu -4 308 2 423 276 71 34 chr2 25406098 25406337 -227850246 + L1ME4a LINE L1 5595 5842 -279 182 274 263 11 chr2 25406436 25406531 -227850052 - MIR SINE MIR -71 137 19 1867 132 35 0 chr2 25406578 25406865 -227849718 - AluJb SINE Alu -15 297 1 232 338 100 38 chr2 25406976 25407316 -227849267 + L2 LINE L2 2934 3294 -19 2083 100 11 0 chr2 25407501 25407782 -227848801 + AluSx SINE Alu 1 284 -28 2137 117 0 0 chr2 25408224 25408533 -227848050 - AluSq SINE Alu -4 309 1 1558 176 30 0 chr2 25409016 25409312 -227847271 + AluJb SINE Alu 3 307 -5 496 253 28 45 chr2 25409475 25409653 -227846930 - L1MC4 LINE L1 -4 8038 7864 1407 119 0 0 chr2 25409700 25409894 -227846689 + AluSq SINE Alu 11 204 -109 303 238 36 12 chr2 25409895 25409979 -227846604 + L1MC4 LINE L1 6624 6709 -1333 930 138 0 0 chr2 25409987 25410117 -227846466 - FLAM_C SINE Alu -3 130 1 373 228 79 9 chr2 25410121 25410235 -227846348 - L1MC4 LINE L1 -181 7861 7740 705 240 60 56 chr2 25410248 25410481 -227846102 + MER119 DNA MER1_type 11 244 -339 2109 82 0 4 chr2 25410485 25410792 -227845791 + AluY SINE Alu 1 306 0 225 261 0 0 chr2 25410793 25410839 -227845744 + MER119 DNA MER1_type 537 582 -1 4703 214 139 56 chr2 25410839 25411114 -227845469 - L1MC4a LINE L1 -154 7654 7403 1947 136 0 7 chr2 25411114 25411408 -227845175 + AluSx SINE Alu 1 292 -20 4703 214 139 56 chr2 25411408 25411897 -227844686 - L1MC4a LINE L1 -405 7403 6956 1822 106 50 20 chr2 25411897 25412199 -227844384 - AluSx SINE Alu -1 311 1 4703 214 139 56 chr2 25412199 25413355 -227843228 - L1MC4a LINE L1 -852 6956 5573 715 180 0 11 chr2 25413493 25413729 -227842854 + AluJo SINE Alu 2 286 -26 872 150 0 0 chr2 25413806 25413939 -227842644 - FLAM_C SINE Alu 0 133 1 367 221 195 21 chr2 25413940 25414130 -227842453 - L1MC5 LINE L1 -51 7910 7688 2769 208 40 32 chr2 25414159 25414631 -227841952 + MLT1E3 LTR MaLR 1 468 -156 2128 106 3 0 chr2 25414631 25414923 -227841660 - AluSx SINE Alu -19 293 1 1676 163 28 0 chr2 25414926 25415215 -227841368 - AluJo SINE Alu -15 297 1 2769 208 40 32 chr2 25415215 25415357 -227841226 + MLT1E3 LTR MaLR 469 624 0 1693 206 0 0 chr2 25415510 25415820 -227840763 + AluSx SINE Alu 1 310 -2 202 111 0 44 chr2 25415825 25415870 -227840713 + (GGGA)n Simple_repeat Simple_repeat 1 43 0 246 295 0 11 chr2 25415870 25415965 -227840618 + L1ME LINE L1 91 184 -5886 1343 238 92 37 chr2 25416128 25416186 -227840397 + MLT1G1 LTR MaLR 1 54 -541 1715 132 97 3 chr2 25416186 25416496 -227840087 - L1MB3 LINE L1 0 6183 5845 1343 238 92 37 chr2 25416496 25416819 -227839764 + MLT1G1 LTR MaLR 54 403 -192 241 323 86 0 chr2 25417010 25417103 -227839480 + L2 LINE L2 2880 2980 -333 329 193 34 0 chr2 25417224 25417312 -227839271 + GA-rich Low_complexity Low_complexity 5 95 0 241 305 133 29 chr2 25417312 25417417 -227839166 + L3 LINE CR1 586 701 -876 1526 188 14 0 chr2 25417418 25417710 -227838873 + AluJb SINE Alu 1 296 -16 1285 203 11 8 chr2 25417747 25418013 -227838570 - AluJo SINE Alu -11 301 35 2151 125 0 0 chr2 25418056 25418368 -227838215 - AluSx SINE Alu 0 312 1 1297 244 35 20 chr2 25418481 25418801 -227837782 - L1ME LINE L1 -507 5663 5334 1758 133 31 7 chr2 25418801 25419087 -227837496 + AluJo SINE Alu 6 298 -14 1297 244 35 20 chr2 25419087 25419168 -227837415 - L1ME LINE L1 -836 5334 5256 1496 234 84 24 chr2 25419186 25419656 -227836927 + L1ME3A LINE L1 5671 6165 -5 312 183 14 28 chr2 25420768 25420839 -227835744 - MER116 DNA Mariner -3 77 8 493 383 24 0 chr2 25421181 25421348 -227835235 + L2 LINE L2 3102 3272 0 1127 148 31 45 chr2 25421534 25421757 -227834826 + AluJo SINE Alu 1 220 -92 372 94 0 0 chr2 25421757 25421810 -227834773 + AluJo SINE Alu 86 138 -164 1294 169 20 128 chr2 25421810 25422153 -227834430 + AluYb8 SINE Alu 3 308 0 835 211 0 6 chr2 25422161 25422327 -227834256 + AluJo SINE Alu 137 301 -1 246 319 69 53 chr2 25422456 25422644 -227833939 - L2 LINE L2 -796 2518 2328 1184 124 0 6 chr2 25422645 25422814 -227833769 + THE1C LTR MaLR 1 168 -207 19758 77 20 24 chr2 25422817 25425455 -227831128 + HERVL LTR ERVL 2697 5325 -329 7357 121 10 6 chr2 25425455 25426491 -227830092 + THE1C-int LTR MaLR 541 1580 0 2119 115 50 21 chr2 25426491 25426830 -227829753 + THE1C LTR MaLR 1 349 -26 1426 173 111 7 chr2 25426832 25427103 -227829480 + LTR28 LTR ERV1 1 299 -721 853 85 0 0 chr2 25427103 25427209 -227829374 + MER61-int LTR ERV1 3755 3860 -1357 498 255 137 54 chr2 25427209 25427400 -227829183 + L1MC4a LINE L1 4285 4459 -1687 2175 121 0 3 chr2 25427400 25427713 -227828870 + AluSx SINE Alu 1 312 0 498 255 137 54 chr2 25427713 25427724 -227828859 + L1MC4a LINE L1 4459 4468 -1678 1786 164 0 3 chr2 25427724 25428016 -227828567 + AluJb SINE Alu 6 296 -16 498 255 137 54 chr2 25428016 25428235 -227828348 + L1MC4a LINE L1 4468 4742 -1404 293 221 129 49 chr2 25428909 25429072 -227827511 + L1MC4a LINE L1 5722 5897 -1911 1901 113 14 10 chr2 25429600 25429892 -227826691 + AluSg SINE Alu 18 310 0 227 98 0 59 chr2 25429922 25429973 -227826610 + (TTTTTG)n Simple_repeat Simple_repeat 2 49 0 2201 92 7 7 chr2 25430005 25430308 -227826275 - AluSx SINE Alu -9 303 1 1931 122 18 0 chr2 25430645 25430974 -227825609 - AluSx SINE Alu 0 334 1 28 0 0 0 chr2 25431173 25431201 -227825382 + AT_rich Low_complexity Low_complexity 1 28 0 1819 100 75 0 chr2 25432067 25432346 -227824237 - AluSx SINE Alu -12 300 1 2257 105 0 0 chr2 25432555 25432859 -227823724 + AluSx SINE Alu 1 304 -8 186 103 0 0 chr2 25432994 25433023 -227823560 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 473 174 105 0 chr2 25433129 25433215 -227823368 + MER58A DNA MER1_type 13 107 0 1221 185 137 0 chr2 25433233 25433503 -227823080 - AluSx SINE Alu -1 311 5 1855 128 14 0 chr2 25433550 25433852 -227822731 + AluSx SINE Alu 1 306 0 668 176 120 44 chr2 25433889 25433992 -227822591 + MER20B DNA MER1_type 515 609 -174 2242 106 0 0 chr2 25433992 25434304 -227822279 - AluSx SINE Alu 0 312 1 668 176 120 44 chr2 25434304 25434450 -227822133 + MER20B DNA MER1_type 609 783 0 2199 115 0 0 chr2 25434470 25434775 -227821808 - AluSx SINE Alu -7 305 1 206 378 0 0 chr2 25435320 25435402 -227821181 + CT-rich Low_complexity Low_complexity 2 83 0 1909 134 0 10 chr2 25436502 25436801 -227819782 - AluSx SINE Alu -16 296 1 2280 84 0 7 chr2 25437440 25437739 -227818844 - AluSx SINE Alu -11 301 5 2067 123 0 0 chr2 25438374 25438666 -227817917 + AluSx SINE Alu 1 292 -20 754 286 100 4 chr2 25438677 25438936 -227817647 - MLT1K LTR MaLR -140 448 165 594 350 138 15 chr2 25439233 25439388 -227817195 - L2 LINE L2 -4 3268 3133 1828 122 11 17 chr2 25439388 25439523 -227817060 + AluJo SINE Alu 1 135 -177 2751 10 0 3 chr2 25439523 25439834 -227816749 + AluYb8 SINE Alu 1 310 -8 1828 122 11 17 chr2 25439834 25439985 -227816598 + AluJo SINE Alu 135 285 -27 222 37 0 0 chr2 25439985 25440012 -227816571 + (CAAT)n Simple_repeat Simple_repeat 2 28 0 594 350 138 15 chr2 25440012 25440256 -227816327 - L2 LINE L2 -139 3133 2920 1858 176 11 37 chr2 25440256 25440527 -227816056 - MER7A DNA MER2_type -2696 342 83 2447 56 0 3 chr2 25440527 25440832 -227815751 + AluY SINE Alu 1 304 -7 1858 176 11 37 chr2 25440832 25440913 -227815670 - MER7A DNA MER2_type -2955 83 1 594 350 138 15 chr2 25440913 25441168 -227815415 - L2 LINE L2 -352 2920 2588 29 0 0 0 chr2 25441304 25441333 -227815250 + AT_rich Low_complexity Low_complexity 1 29 0 1883 145 3 10 chr2 25441333 25441629 -227814954 + AluSx SINE Alu 1 294 -18 1000 69 8 0 chr2 25441635 25441766 -227814817 - L1MA2 LINE L1 0 6304 6173 2076 82 0 56 chr2 25441789 25442092 -227814491 - AluSq SINE Alu -27 286 1 663 289 52 41 chr2 25442102 25442469 -227814114 + L1MC4 LINE L1 7298 7668 -374 348 115 19 0 chr2 25442652 25442704 -227813879 - AluSp/q SINE Alu -71 232 180 1058 161 11 0 chr2 25442748 25442928 -227813655 - AluSx SINE Alu -121 191 10 209 171 98 0 chr2 25442973 25443014 -227813569 + L2 LINE L2 2699 2743 -571 1214 154 168 62 chr2 25443019 25443426 -227813157 + Tigger5 DNA MER2_type 5 2323 0 397 289 66 0 chr2 25443818 25443939 -227812644 + L2 LINE L2 3144 3272 0 2154 108 0 0 chr2 25444006 25444301 -227812282 - AluSx SINE Alu -15 297 3 575 267 182 27 chr2 25444493 25444643 -227811940 + MIR SINE MIR 2 127 -135 216 0 0 0 chr2 25444643 25444667 -227811916 + (TA)n Simple_repeat Simple_repeat 2 25 0 2078 127 0 0 chr2 25444667 25444966 -227811617 - AluSx SINE Alu -13 299 1 575 267 182 27 chr2 25444966 25445039 -227811544 + MIR SINE MIR 126 261 -1 805 310 32 29 chr2 25445043 25445353 -227811230 - L3 LINE CR1 -428 1149 839 2084 119 0 0 chr2 25445362 25445655 -227810928 - AluSx SINE Alu -19 293 1 278 307 235 18 chr2 25445656 25445822 -227810761 - L3 LINE CR1 -916 661 460 369 143 39 39 chr2 25445877 25445954 -227810629 + L1MC/D LINE L1 5708 5784 -2024 264 352 16 0 chr2 25446348 25446476 -227810107 + LTR67 LTR ERVL 428 557 0 1372 185 10 40 chr2 25446538 25446835 -227809748 + AluJb SINE Alu 1 288 -24 2031 104 19 10 chr2 25446845 25447152 -227809431 + AluSg SINE Alu 1 310 0 461 288 95 18 chr2 25447294 25447516 -227809067 - HAL1 LINE L1 -1499 1008 770 * 628 238 65 65 chr2 25447509 25447803 -227808780 - HAL1 LINE L1 -2151 356 63 225 308 107 58 chr2 25447931 25448155 -227808428 - L3 LINE CR1 -1148 429 195 25 31 0 0 chr2 25448275 25448307 -227808276 + AT_rich Low_complexity Low_complexity 1 32 0 2186 92 7 3 chr2 25448779 25449085 -227807498 - AluSq SINE Alu -6 307 1 380 300 36 7 chr2 25449086 25449226 -227807357 + LTR67 LTR ERVL 414 557 0 365 319 93 51 chr2 25449899 25450062 -227806521 + HERVL LTR ERVL 826 981 -4783 303 28 0 0 chr2 25450062 25450098 -227806485 + (CA)n Simple_repeat Simple_repeat 2 37 0 365 319 93 51 chr2 25450098 25450288 -227806295 + HERVL LTR ERVL 981 1194 -4570 1883 162 3 10 chr2 25450696 25450715 -227805868 - AluJb SINE Alu -7 305 287 381 22 0 0 chr2 25450715 25450761 -227805822 + (TTGG)n Simple_repeat Simple_repeat 2 47 0 1883 162 3 10 chr2 25450761 25451044 -227805539 - AluJb SINE Alu -25 287 5 1732 314 89 65 chr2 25451072 25451745 -227804838 + HERVL LTR ERVL 2151 2807 -2847 2362 85 10 0 chr2 25451745 25452039 -227804544 + AluSq SINE Alu 1 297 -16 1732 314 89 65 chr2 25452039 25452170 -227804413 + HERVL LTR ERVL 2807 2933 -2721 2184 104 17 17 chr2 25452170 25452469 -227804114 + AluSx SINE Alu 1 299 -13 1732 314 89 65 chr2 25452469 25452507 -227804076 + HERVL LTR ERVL 2933 2969 -2685 1847 145 24 10 chr2 25452507 25452803 -227803780 - AluJb SINE Alu -12 300 1 450 0 0 0 chr2 25452803 25452853 -227803730 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 1894 142 8 4 chr2 25452858 25453125 -227803458 - AluSx SINE Alu -44 268 1 1732 314 89 65 chr2 25453125 25453724 -227802859 + HERVL LTR ERVL 2972 3600 -2054 370 336 84 9 chr2 25453732 25453958 -227802625 + HERVL LTR ERVL 3731 3973 -1791 2089 138 10 0 chr2 25454033 25454338 -227802245 + AluSx SINE Alu 1 308 -4 2359 112 7 0 chr2 25454587 25454892 -227801691 + AluSx SINE Alu 1 307 -5 1967 152 0 7 chr2 25455567 25455869 -227800714 + AluJb SINE Alu 7 306 -6 258 283 66 9 chr2 25456320 25456426 -227800157 - MER5A DNA MER1_type -75 114 3 2331 99 0 0 chr2 25456604 25456922 -227799661 - AluSx SINE Alu 0 312 1 240 172 0 109 chr2 25457030 25457094 -227799489 - L2 LINE L2 -5 3308 3252 208 276 69 9 chr2 25457728 25457844 -227798739 + L2 LINE L2 1892 2014 -1300 252 323 81 8 chr2 25458144 25458268 -227798315 + L2 LINE L2 3179 3311 -2 1737 168 0 72 chr2 25458875 25459208 -227797375 - AluJb SINE Alu -3 309 1 265 281 11 34 chr2 25460213 25460302 -227796281 + MIR SINE MIR 36 122 -86 633 249 107 30 chr2 25461122 25461355 -227795228 + MIR SINE MIR 1 251 -11 2300 104 0 0 chr2 25461557 25461893 -227794690 - AluSg SINE Alu 0 336 1 353 238 140 14 chr2 25462397 25462540 -227794043 - MER53 DNA DNA -2 187 27 1696 98 0 0 chr2 25462540 25462754 -227793829 - AluSg/x SINE Alu -17 295 82 1559 129 110 36 chr2 25462802 25463111 -227793472 - MER21A LTR ERV1 -6 925 594 1369 173 60 11 chr2 25463267 25463643 -227792940 + MER21A LTR ERV1 1 418 -445 2529 90 0 0 chr2 25463901 25464211 -227792372 - AluSx SINE Alu -2 310 1 2357 80 7 3 chr2 25465112 25465412 -227791171 + AluSx SINE Alu 12 312 0 24 32 0 0 chr2 25466129 25466160 -227790423 + GC_rich Low_complexity Low_complexity 1 31 0 209 227 34 23 chr2 25466301 25466389 -227790194 + C-rich Low_complexity Low_complexity 3 91 0 29 0 0 0 chr2 25466496 25466525 -227790058 + GC_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 25468269 25468290 -227788293 + AT_rich Low_complexity Low_complexity 1 21 0 2393 87 0 3 chr2 25469660 25469958 -227786625 + AluSq SINE Alu 1 297 -16 2337 98 3 0 chr2 25470264 25470561 -227786022 + AluSx SINE Alu 1 298 -14 2647 27 7 0 chr2 25470667 25470962 -227785621 - AluY SINE Alu -14 297 1 342 294 37 0 chr2 25471477 25471586 -227784997 + L1MC4 LINE L1 7786 7898 -144 827 252 41 35 chr2 25471886 25472101 -227784482 - MLT1A2 LTR MaLR -16 402 190 1945 145 19 13 chr2 25472101 25472411 -227784172 - AluJo SINE Alu 0 312 1 827 252 41 35 chr2 25472411 25472441 -227784142 - MLT1A2 LTR MaLR -228 190 162 718 80 0 0 chr2 25472441 25472541 -227784042 - HY3 scRNA scRNA -1 100 1 827 252 41 35 chr2 25472541 25472662 -227783921 - MLT1A2 LTR MaLR -256 162 34 2103 103 43 7 chr2 25472662 25472943 -227783640 + AluSx SINE Alu 1 291 -21 484 156 31 0 chr2 25472972 25473068 -227783515 + L1MA9 LINE L1 5937 6035 -277 2160 100 7 17 chr2 25473218 25473519 -227783064 + AluSp SINE Alu 1 298 -15 2151 128 7 0 chr2 25474300 25474590 -227781993 - AluSx SINE Alu -20 292 1 783 209 24 80 chr2 25475164 25475413 -227781170 - MLT1D LTR MaLR -270 235 1 267 395 15 24 chr2 25475413 25475618 -227780965 - MIR SINE MIR -59 203 1 * 309 302 0 63 chr2 25475618 25475727 -227780856 - MER5A DNA MER1_type -23 166 66 1995 139 17 3 chr2 25475727 25476028 -227780555 - AluJb SINE Alu -7 305 1 434 262 66 87 chr2 25476910 25477093 -227779490 + MIR SINE MIR 2 180 -82 2270 82 58 0 chr2 25477234 25477528 -227779055 - AluY SINE Alu 0 311 1 209 73 0 49 chr2 25477666 25477707 -227778876 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2280 153 62 46 chr2 25478931 25479428 -227777155 - MLT1D LTR MaLR 0 505 1 472 305 51 30 chr2 25479661 25480213 -227776370 + L1MC5 LINE L1 7222 7690 -271 1251 149 84 8 chr2 25481051 25481312 -227775271 - L1MB5 LINE L1 0 6174 5894 2275 174 24 40 chr2 25481313 25481907 -227774676 - L1MB5 LINE L1 -439 5741 5173 2102 121 7 23 chr2 25481907 25482212 -227774371 - AluSx SINE Alu -10 302 3 2275 174 24 40 chr2 25482212 25482431 -227774152 - L1MB5 LINE L1 -1007 5173 4952 2148 117 33 0 chr2 25482799 25483099 -227773484 + AluSx SINE Alu 3 312 0 183 184 0 0 chr2 25483298 25483336 -227773247 + GA-rich Low_complexity Low_complexity 3 40 0 285 284 94 16 chr2 25483365 25483492 -227773091 - MER5B DNA MER1_type 0 178 42 218 361 93 10 chr2 25483529 25483734 -227772849 + L3 LINE CR1 1259 1480 -97 205 200 22 0 chr2 25483943 25483988 -227772595 + CT-rich Low_complexity Low_complexity 5 50 0 2111 125 0 30 chr2 25484047 25484188 -227772395 + AluSx SINE Alu 1 145 -167 2128 115 52 0 chr2 25484188 25484474 -227772109 + AluSx SINE Alu 1 301 -11 2111 125 0 30 chr2 25484474 25484635 -227771948 + AluSx SINE Alu 145 294 -18 216 0 0 0 chr2 25485521 25485545 -227771038 + (A)n Simple_repeat Simple_repeat 1 24 0 337 259 127 19 chr2 25485780 25485938 -227770645 - HAL1 LINE L1 -386 2121 1947 1234 146 0 11 chr2 25485941 25486126 -227770457 - AluJ SINE Alu -22 290 108 731 108 0 0 chr2 25486135 25486246 -227770337 - Tigger5 DNA MER2_type -144 2179 2069 1900 118 4 8 chr2 25486246 25486539 -227770044 + AluSx SINE Alu 24 315 0 650 124 152 0 chr2 25486540 25486645 -227769938 - AluJ SINE Alu -189 123 3 580 241 200 5 chr2 25486647 25486867 -227769716 - HAL1 LINE L1 -548 1959 1697 320 335 29 29 chr2 25486868 25486961 -227769622 - HAL1 LINE L1 -2325 182 87 2586 59 3 3 chr2 25486961 25487266 -227769317 - AluY SINE Alu -6 305 1 320 335 29 29 chr2 25487266 25487345 -227769238 - HAL1 LINE L1 -2419 88 10 205 362 0 57 chr2 25487347 25487488 -227769095 - L2 LINE L2 -594 2720 2588 2279 124 10 0 chr2 25488042 25488348 -227768235 - AluSx SINE Alu -3 309 1 22 0 0 0 chr2 25488349 25488371 -227768212 + AT_rich Low_complexity Low_complexity 1 22 0 2420 97 6 0 chr2 25488533 25488844 -227767739 - AluSp SINE Alu 0 313 1 2427 92 0 0 chr2 25489785 25490080 -227766503 + AluSc SINE Alu 1 295 -14 2361 93 0 13 chr2 25490137 25490450 -227766133 + AluSg1 SINE Alu 1 309 0 395 311 42 42 chr2 25490699 25490866 -227765717 + L1ME LINE L1 5657 5823 -298 2480 64 0 55 chr2 25490872 25491200 -227765383 + AluY SINE Alu 1 310 -1 849 235 37 89 chr2 25491747 25491831 -227764752 - L1M4 LINE L1 -2793 3353 3266 2352 111 0 9 chr2 25491831 25492147 -227764436 - AluSp SINE Alu 0 313 1 849 235 37 89 chr2 25492147 25492387 -227764196 - L1M4 LINE L1 -2880 3266 3015 519 205 137 0 chr2 25492387 25492504 -227764079 - FLAM_A SINE Alu 0 133 1 849 235 37 89 chr2 25492504 25492865 -227763718 - L1M4 LINE L1 -3131 3015 2727 1038 129 14 0 chr2 25492966 25493113 -227763470 + AluSg/x SINE Alu 142 290 -20 2275 100 3 10 chr2 25493894 25494194 -227762389 - AluSp SINE Alu -15 298 1 1652 143 18 73 chr2 25494346 25494437 -227762146 - L1MA9 LINE L1 -277 6035 5941 2190 102 0 3 chr2 25494437 25494763 -227761820 - AluSx SINE Alu 0 325 1 1652 143 18 73 chr2 25494763 25495013 -227761570 - L1MA9 LINE L1 -371 5941 5712 322 200 133 0 chr2 25495046 25495121 -227761462 + L1MA9 LINE L1 6159 6243 -69 648 118 18 0 chr2 25495122 25495232 -227761351 + FLAM_C SINE Alu 32 143 0 312 128 7 0 chr2 25495232 25495289 -227761294 + Alu SINE Alu 1 45 -263 2230 94 13 7 chr2 25495462 25495761 -227760822 + AluY SINE Alu 1 301 -10 2276 103 10 13 chr2 25496080 25496435 -227760148 + AluSq SINE Alu 1 354 0 1528 266 90 53 chr2 25496461 25497519 -227759064 + L2 LINE L2 2184 3289 -24 2209 129 0 3 chr2 25497519 25497821 -227758762 - AluSx SINE Alu -11 301 1 1528 266 90 53 chr2 25497821 25497843 -227758740 + L2 LINE L2 3289 3309 -4 1791 231 54 91 chr2 25498079 25498612 -227757971 + LTR8 LTR ERV1 17 519 -172 2191 105 7 0 chr2 25498612 25498906 -227757677 + AluSq SINE Alu 6 301 -12 1791 231 54 91 chr2 25498906 25499073 -227757510 + LTR8 LTR ERV1 519 691 0 229 88 0 0 chr2 25499175 25499209 -227757374 - MER3 DNA MER1_type -160 49 16 431 208 0 0 chr2 25499240 25499336 -227757247 - L1ME2 LINE L1 -208 5956 5861 1867 149 0 50 chr2 25499442 25499765 -227756818 - AluJo SINE Alu -1 311 5 216 350 68 10 chr2 25499885 25499988 -227756595 - L2 LINE L2 -695 2619 2511 239 324 14 0 chr2 25500704 25500778 -227755805 - L2 LINE L2 -210 3062 2988 413 255 0 0 chr2 25501090 25501188 -227755395 + L1ME1 LINE L1 6066 6163 -3 264 139 278 0 chr2 25501259 25501331 -227755252 - MIR SINE MIR -56 152 61 1978 111 69 7 chr2 25501376 25501665 -227754918 - AluSx SINE Alu -5 307 1 465 213 132 46 chr2 25501963 25501998 -227754585 + MER53 DNA DNA 1 32 -157 1826 130 43 14 chr2 25501998 25502275 -227754308 + AluJo SINE Alu 1 285 -27 208 0 0 0 chr2 25502275 25502298 -227754285 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 465 213 132 46 chr2 25502298 25502435 -227754148 + MER53 DNA DNA 32 189 0 314 203 7 61 chr2 25502442 25502590 -227753993 + A-rich Low_complexity Low_complexity 2 141 0 491 336 31 14 chr2 25503295 25503597 -227752986 + L1ME4a LINE L1 5574 5883 -238 229 186 34 0 chr2 25503652 25503711 -227752872 - L1MD2 LINE L1 0 6359 6299 1263 148 10 5 chr2 25503716 25503925 -227752658 + AluSc SINE Alu 1 210 -99 1166 115 11 17 chr2 25504344 25504538 -227752045 + AluSp SINE Alu 114 306 0 2823 139 40 82 chr2 25504543 25504680 -227751903 - L1MB8 LINE L1 -16 6162 6021 621 152 9 0 chr2 25504680 25504785 -227751798 + L1PB2 LINE L1 6040 6145 -6 1938 119 13 32 chr2 25504785 25505117 -227751466 + AluSx SINE Alu 1 312 0 2823 139 40 82 chr2 25505117 25505344 -227751239 - L1MB8 LINE L1 -156 6022 5787 2411 103 3 0 chr2 25505344 25505656 -227750927 - AluSp SINE Alu 0 313 1 2823 139 40 82 chr2 25505656 25505944 -227750639 - L1MB8 LINE L1 -391 5787 5536 344 247 11 44 chr2 25505966 25506119 -227750464 - MER20B DNA MER1_type -41 742 594 2109 128 0 17 chr2 25506119 25506417 -227750166 - AluSx SINE Alu -18 294 2 344 247 11 44 chr2 25506417 25506445 -227750138 - MER20B DNA MER1_type -189 594 567 297 183 0 0 chr2 25506677 25506737 -227749846 + (CA)n Simple_repeat Simple_repeat 1 60 0 448 227 82 67 chr2 25507913 25508107 -227748476 - MIR3 SINE MIR -6 202 6 1308 121 0 0 chr2 25508108 25508281 -227748302 - AluJb SINE Alu -15 297 125 180 111 0 0 chr2 25508288 25508315 -227748268 + (TA)n Simple_repeat Simple_repeat 2 28 0 2246 192 156 34 chr2 25508907 25509606 -227746977 - LTR48 LTR ERV1 0 787 4 4126 80 9 28 chr2 25509764 25509942 -227746641 - MER41A LTR ERV1 0 554 374 2394 95 0 0 chr2 25509942 25510238 -227746345 - AluSg1 SINE Alu -13 296 1 4126 80 9 28 chr2 25510238 25510624 -227745959 - MER41A LTR ERV1 -180 374 1 222 231 0 19 chr2 25510717 25510769 -227745814 - L2 LINE L2 -13 3300 3250 192 206 118 15 chr2 25511025 25511093 -227745490 - L3 LINE CR1 -308 1269 1195 220 324 95 14 chr2 25511410 25511620 -227744963 - L2 LINE L2 -1018 2296 2070 2281 99 3 26 chr2 25511637 25511950 -227744633 + AluSx SINE Alu 1 306 -6 310 242 167 30 chr2 25511990 25512122 -227744461 - L1ME LINE L1 -398 5723 5574 256 286 82 66 chr2 25512398 25512580 -227744003 + MIR3 SINE MIR 16 200 -8 377 183 144 10 chr2 25512774 25512878 -227743705 + L2 LINE L2 2571 2688 -626 2096 145 0 0 chr2 25512879 25513183 -227743400 + AluSx SINE Alu 1 304 -8 262 242 32 0 chr2 25513192 25513254 -227743329 + L2 LINE L2 2760 2823 -491 441 0 0 0 chr2 25513277 25513326 -227743257 + (CA)n Simple_repeat Simple_repeat 1 49 0 735 275 112 20 chr2 25513370 25513665 -227742918 + L2 LINE L2 2991 3312 -1 205 139 116 0 chr2 25513836 25513879 -227742704 + L2 LINE L2 3202 3249 -64 184 228 279 25 chr2 25514333 25514412 -227742171 - L2 LINE L2 -1 3312 3214 2539 83 0 0 chr2 25514416 25514728 -227741855 + AluSp SINE Alu 2 313 0 975 75 0 8 chr2 25514742 25514862 -227741721 + AluSq/x SINE Alu 21 139 -174 326 70 0 0 chr2 25514862 25514932 -227741651 + Alu SINE Alu 242 311 0 1578 139 68 24 chr2 25515130 25515485 -227741098 + AluJb SINE Alu 1 368 0 320 309 33 9 chr2 25515892 25516102 -227740481 + L1ME4a LINE L1 4369 4583 -1563 242 320 40 25 chr2 25516329 25516607 -227739976 + L1ME4a LINE L1 4735 5016 -1130 1185 130 0 0 chr2 25516790 25516959 -227739624 + AluSp SINE Alu 137 305 -8 2247 118 0 10 chr2 25516969 25517282 -227739301 + AluSx SINE Alu 1 310 -2 24 0 0 0 chr2 25517975 25517999 -227738584 + AT_rich Low_complexity Low_complexity 1 24 0 678 226 55 0 chr2 25518016 25518162 -227738421 - MIR SINE MIR -29 233 80 339 274 125 21 chr2 25519300 25519327 -227737256 + L1ME4a LINE L1 5806 5829 -292 2208 108 0 14 chr2 25519327 25519622 -227736961 - AluSg SINE Alu -19 291 1 339 274 125 21 chr2 25519622 25519875 -227736708 + L1ME4a LINE L1 5829 6115 -6 393 356 34 34 chr2 25520004 25520240 -227736343 + L2 LINE L2 3016 3251 -21 678 226 55 0 chr2 25521440 25521586 -227734997 + MIR SINE MIR 80 233 -29 24 0 0 0 chr2 25521603 25521627 -227734956 + AT_rich Low_complexity Low_complexity 1 24 0 2415 90 3 0 chr2 25522317 25522627 -227733956 - AluSq SINE Alu -2 311 1 555 276 150 52 chr2 25524683 25525009 -227731574 - L2 LINE L2 -5 3308 2951 318 315 19 19 chr2 25525728 25525836 -227730747 - MIR SINE MIR -147 115 8 254 159 0 0 chr2 25525851 25525895 -227730688 + MER5A DNA MER1_type 9 52 -137 705 225 12 65 chr2 25526042 25526211 -227730372 + MIR SINE MIR 14 173 -89 233 158 0 0 chr2 25526211 25526249 -227730334 - MER4A LTR ERV1 0 664 627 2342 98 0 13 chr2 25526255 25526571 -227730012 - AluSx SINE Alu 0 312 1 1678 114 6 81 chr2 25526572 25526916 -227729667 - MER4A LTR ERV1 -25 639 262 677 91 0 10 chr2 25526917 25527016 -227729567 - MER4A LTR ERV1 -566 98 1 257 250 0 16 chr2 25527016 25527080 -227729503 + MIR SINE MIR 170 232 -30 206 357 21 49 chr2 25527260 25527403 -227729180 - MIR SINE MIR -121 141 3 2185 136 0 0 chr2 25527496 25527797 -227728786 - AluSx SINE Alu -11 301 1 4111 140 23 65 chr2 25528047 25528625 -227727958 - L1MC1 LINE L1 -420 5913 5312 2230 133 0 0 chr2 25528625 25528925 -227727658 - AluSx SINE Alu -12 300 1 4111 140 23 65 chr2 25528925 25528970 -227727613 - L1MC1 LINE L1 -1021 5312 5267 2810 99 8 3 chr2 25528970 25529343 -227727240 - THE1C LTR MaLR 0 375 1 4111 140 23 65 chr2 25529343 25529515 -227727068 - L1MC1 LINE L1 -1066 5267 5187 2184 110 24 0 chr2 25529515 25529805 -227726778 - AluSx SINE Alu -15 297 1 4111 140 23 65 chr2 25529805 25530065 -227726518 - L1MC1 LINE L1 -1146 5187 4918 393 265 71 83 chr2 25530643 25530855 -227725728 - MIR SINE MIR -36 226 9 2332 89 0 3 chr2 25534109 25534400 -227722183 - AluSc SINE Alu -19 290 1 306 50 0 0 chr2 25534436 25534476 -227722107 + (CA)n Simple_repeat Simple_repeat 2 41 0 318 291 51 0 chr2 25534477 25534556 -227722027 - L1MC4 LINE L1 -1345 6697 6615 2076 85 31 4 chr2 25534599 25534859 -227721724 - AluSg SINE Alu -30 280 14 1982 166 3 13 chr2 25535245 25535552 -227721031 + AluJb SINE Alu 1 304 -8 2140 130 19 7 chr2 25536037 25536345 -227720238 + AluJb SINE Alu 1 312 0 767 277 50 85 chr2 25536613 25536812 -227719771 + L1ME4a LINE L1 5479 5683 -438 1951 170 0 3 chr2 25536812 25537123 -227719460 - AluJb SINE Alu -2 310 1 767 277 50 85 chr2 25537123 25537446 -227719137 + L1ME4a LINE L1 5683 5976 -145 2262 132 0 0 chr2 25537446 25537749 -227718834 + AluSx SINE Alu 1 303 -9 767 277 50 85 chr2 25537749 25537886 -227718697 + L1ME4a LINE L1 5976 6116 -5 2338 97 0 0 chr2 25538056 25538346 -227718237 - AluSg SINE Alu -20 290 1 193 362 141 22 chr2 25538372 25538684 -227717899 + L2 LINE L2 2550 2898 -416 234 0 0 0 chr2 25540864 25540890 -227715693 + (T)n Simple_repeat Simple_repeat 1 26 0 2310 102 0 3 chr2 25541953 25542247 -227714336 + AluSq SINE Alu 1 293 -20 2407 78 0 0 chr2 25542530 25542824 -227713759 - AluY SINE Alu -17 294 1 380 218 122 107 chr2 25543124 25543387 -227713196 - MLT1J LTR MaLR -38 473 167 1852 160 10 3 chr2 25543387 25543680 -227712903 - AluJb SINE Alu -17 295 1 380 218 122 107 chr2 25543680 25543847 -227712736 - MLT1J LTR MaLR -344 167 4 193 29 59 0 chr2 25543929 25543963 -227712620 + (CAAAA)n Simple_repeat Simple_repeat 1 36 0 264 374 11 26 chr2 25544167 25544357 -227712226 + L3 LINE CR1 1171 1357 -220 2106 105 80 23 chr2 25544372 25544724 -227711859 - THE1C LTR MaLR 0 375 4 244 277 12 36 chr2 25545217 25545300 -227711283 + L2 LINE L2 3223 3303 -10 323 188 14 29 chr2 25545416 25545485 -227711098 + MIR3 SINE MIR 126 193 -15 46 33 0 0 chr2 25545994 25546054 -227710529 + AT_rich Low_complexity Low_complexity 1 60 0 320 147 0 137 chr2 25546054 25546098 -227710485 - L1MB7 LINE L1 -41 6143 6117 1986 126 12 64 chr2 25546098 25546424 -227710159 + AluSx SINE Alu 1 309 -3 320 147 0 137 chr2 25546424 25546474 -227710109 - L1MB7 LINE L1 -67 6117 6062 444 308 77 0 chr2 25546722 25546878 -227709705 + MIR3 SINE MIR 16 183 -25 2245 126 7 0 chr2 25547174 25547483 -227709100 - AluSx SINE Alu -1 311 1 756 151 13 10 chr2 25547791 25548097 -227708486 + CT-rich Low_complexity Low_complexity 1 307 0 303 307 0 0 chr2 25548124 25548212 -227708371 - MIR SINE MIR -2 260 173 2208 108 40 0 chr2 25548510 25548807 -227707776 - AluSg SINE Alu -1 309 1 2186 113 0 0 chr2 25548873 25549181 -227707402 - AluSq SINE Alu 0 308 1 815 236 12 56 chr2 25549181 25549431 -227707152 - L1MA9 LINE L1 -362 5950 5712 610 159 9 18 chr2 25549540 25549653 -227706930 + FLAM_C SINE Alu 32 143 0 1296 108 48 0 chr2 25549663 25549849 -227706734 + AluY SINE Alu 1 195 -116 233 333 90 18 chr2 25550085 25550223 -227706360 - MIR SINE MIR -31 177 25 23 0 0 0 chr2 25550856 25550879 -227705704 + AT_rich Low_complexity Low_complexity 1 23 0 2048 132 14 0 chr2 25550977 25551264 -227705319 + AluSx SINE Alu 1 291 -21 2439 61 0 0 chr2 25551268 25551576 -227705007 + AluSc SINE Alu 1 308 0 2351 107 3 3 chr2 25551796 25552106 -227704477 - AluSx SINE Alu -2 310 1 2385 110 0 0 chr2 25552863 25553171 -227703412 - AluSx SINE Alu -4 308 1 910 273 105 19 chr2 25553428 25553838 -227702745 + L2 LINE L2 2867 3311 -2 2118 142 10 0 chr2 25553985 25554281 -227702302 + AluJb SINE Alu 1 299 -13 250 136 0 0 chr2 25554701 25554745 -227701838 - MER4-int LTR ERV1 -5437 1161 1118 495 0 0 0 chr2 25555182 25555237 -227701346 + (TG)n Simple_repeat Simple_repeat 1 55 0 2426 57 3 41 chr2 25555349 25555667 -227700916 + AluY SINE Alu 1 306 -5 1977 163 0 3 chr2 25555678 25555979 -227700604 + AluSx SINE Alu 1 300 -12 2279 51 51 0 chr2 25556570 25556846 -227699737 + AluY SINE Alu 1 290 -21 843 206 0 57 chr2 25557085 25557260 -227699323 - AluSg/x SINE Alu -14 298 134 2297 122 0 0 chr2 25557260 25557564 -227699019 - AluSx SINE Alu -8 304 1 2545 45 10 19 chr2 25558891 25559205 -227697378 + AluY SINE Alu 1 311 0 243 0 0 0 chr2 25559534 25559561 -227697022 + (CGGGGG)n Simple_repeat Simple_repeat 1 27 0 881 92 8 0 chr2 25560097 25560216 -227696367 + AluY SINE Alu 176 295 -16 228 233 207 0 chr2 25560244 25560360 -227696223 + L1ME4a LINE L1 5978 6117 -4 2437 81 0 3 chr2 25560363 25560658 -227695925 + AluSq SINE Alu 1 294 -19 436 282 43 62 chr2 25561106 25561248 -227695335 + MIR SINE MIR 20 158 -104 2180 136 0 3 chr2 25561248 25561556 -227695027 + AluSx SINE Alu 2 308 -4 436 282 43 62 chr2 25561556 25561622 -227694961 + MIR SINE MIR 158 224 -38 1709 193 3 10 chr2 25562276 25562577 -227694006 + AluJo SINE Alu 1 299 -13 1654 171 44 14 chr2 25562712 25563074 -227693509 - L1MC1 LINE L1 0 6333 5961 196 178 44 0 chr2 25564391 25564436 -227692147 + L2 LINE L2 3220 3266 -6 300 303 23 45 chr2 25564477 25564609 -227691974 - L1ME3A LINE L1 -36 6134 6006 236 149 149 0 chr2 25564642 25564709 -227691874 - L1ME3A LINE L1 -232 5938 5862 2203 122 3 16 chr2 25564725 25565037 -227691546 + AluSq SINE Alu 1 308 -5 2121 107 4 4 chr2 25565259 25565540 -227691043 - AluSx SINE Alu -31 281 1 203 232 0 36 chr2 25565713 25565769 -227690814 + (TATG)n Simple_repeat Simple_repeat 3 56 0 256 93 0 23 chr2 25565868 25565911 -227690672 - L1ME3A LINE L1 -2071 5737 5696 343 306 208 0 chr2 25565914 25566087 -227690496 - L1ME3A LINE L1 -2165 5643 5435 2269 96 17 13 chr2 25566114 25566416 -227690167 + AluSx SINE Alu 1 303 -9 272 0 79 0 chr2 25566531 25566569 -227690014 + CT-rich Low_complexity Low_complexity 4 44 0 1951 109 62 7 chr2 25566695 25566971 -227689612 + AluSg SINE Alu 9 299 -11 276 328 16 55 chr2 25567052 25567180 -227689403 + MIR SINE MIR 60 182 -80 428 186 372 0 chr2 25567885 25568014 -227688569 - MER58B DNA MER1_type 0 341 165 663 208 8 8 chr2 25568018 25568148 -227688435 - FLAM_A SINE Alu -2 131 2 698 190 76 0 chr2 25568165 25568323 -227688260 + MLT1B LTR MaLR 7 176 -214 817 183 59 0 chr2 25568325 25568478 -227688105 + AluJb SINE Alu 137 298 -14 2443 39 0 14 chr2 25568485 25568810 -227687773 + AluY SINE Alu 5 325 0 684 167 18 11 chr2 25568849 25568998 -227687585 + MLT1C LTR MaLR 239 466 -1 189 0 0 0 chr2 25569027 25569048 -227687535 + (TTC)n Simple_repeat Simple_repeat 3 23 0 1236 89 0 6 chr2 25569209 25569366 -227687217 + AluJb SINE Alu 72 227 -85 3752 172 81 55 chr2 25569980 25570650 -227685933 - LTR13 LTR ERVK 0 954 252 2595 60 7 0 chr2 25570650 25570951 -227685632 - AluY SINE Alu -8 303 1 3752 172 81 55 chr2 25570951 25571210 -227685373 - LTR13 LTR ERVK -702 252 1 2122 135 0 3 chr2 25571265 25571562 -227685021 - AluJb SINE Alu -16 296 1 248 288 209 17 chr2 25571568 25571745 -227684838 - MIR SINE MIR -12 250 40 2499 69 0 0 chr2 25572017 25572308 -227684275 - AluSc SINE Alu -18 291 1 254 156 47 0 chr2 25572666 25572730 -227683853 + GA-rich Low_complexity Low_complexity 2 68 0 306 274 11 63 chr2 25573682 25573777 -227682806 - L1MC4 LINE L1 -1340 6702 6613 185 196 18 0 chr2 25573784 25573840 -227682743 + (TA)n Simple_repeat Simple_repeat 1 57 0 2230 122 3 0 chr2 25573893 25574196 -227682387 + AluSg SINE Alu 1 304 -6 2290 97 7 10 chr2 25574843 25575143 -227681440 + AluSg SINE Alu 1 299 -11 969 269 60 95 chr2 25575566 25576093 -227680490 - L2 LINE L2 -105 3208 2708 2185 105 0 7 chr2 25576093 25576400 -227680183 - AluSx SINE Alu 0 306 2 969 269 60 95 chr2 25576400 25576667 -227679916 - L2 LINE L2 -605 2708 2433 535 224 115 0 chr2 25576770 25576926 -227679657 + L1M4 LINE L1 5520 5693 -485 2172 115 0 3 chr2 25576928 25577214 -227679369 + AluSx SINE Alu 1 285 -27 297 0 0 0 chr2 25577226 25577259 -227679324 + (TG)n Simple_repeat Simple_repeat 2 34 0 2213 167 54 11 chr2 25577264 25577728 -227678855 + L1HS LINE L1 5639 6123 -61 2232 120 3 0 chr2 25577729 25578030 -227678553 - AluSx SINE Alu -10 302 1 515 299 145 43 chr2 25580052 25580377 -227676206 - L2 LINE L2 -5 3308 2951 294 315 19 19 chr2 25581096 25581204 -227675379 - MIR SINE MIR -147 115 8 237 159 0 0 chr2 25581219 25581263 -227675320 + MER5A DNA MER1_type 9 52 -137 642 231 12 65 chr2 25581410 25581579 -227675004 + MIR SINE MIR 14 173 -89 1690 111 5 126 chr2 25581579 25581623 -227674960 - MER4A LTR ERV1 0 664 616 2347 98 0 13 chr2 25581623 25581939 -227674644 - AluSx SINE Alu 0 312 1 1690 111 5 126 chr2 25581939 25582284 -227674299 - MER4A LTR ERV1 -48 616 262 682 91 0 10 chr2 25582285 25582384 -227674199 - MER4A LTR ERV1 -566 98 1 246 250 0 16 chr2 25582384 25582448 -227674135 + MIR SINE MIR 170 232 -30 2205 133 0 0 chr2 25582864 25583165 -227673418 - AluSx SINE Alu -11 301 1 4113 139 23 64 chr2 25583415 25583993 -227672590 - L1MC1 LINE L1 -420 5913 5313 2208 137 0 0 chr2 25583993 25584293 -227672290 - AluSx SINE Alu -12 300 1 4113 139 23 64 chr2 25584293 25584338 -227672245 - L1MC1 LINE L1 -1020 5313 5268 2429 115 16 11 chr2 25584338 25584711 -227671872 - THE1C LTR MaLR 0 375 1 4113 139 23 64 chr2 25584711 25584881 -227671702 - L1MC1 LINE L1 -1065 5268 5187 2195 110 24 0 chr2 25584881 25585171 -227671412 - AluSx SINE Alu -15 297 1 4113 139 23 64 chr2 25585171 25585431 -227671152 - L1MC1 LINE L1 -1146 5187 4918 377 275 155 26 chr2 25586009 25586202 -227670381 - MIR SINE MIR -36 226 9 248 159 191 0 chr2 25588680 25588743 -227667840 - MIR3 SINE MIR -25 183 109 821 113 8 15 chr2 25588755 25588888 -227667695 + FLAM_C SINE Alu 2 133 0 2299 119 0 0 chr2 25589069 25589371 -227667212 - AluSx SINE Alu -10 302 1 287 228 0 0 chr2 25590232 25590289 -227666294 - MIR SINE MIR -74 188 132 30 27 0 0 chr2 25590582 25590619 -227665964 + AT_rich Low_complexity Low_complexity 1 37 0 270 0 0 0 chr2 25590628 25590658 -227665925 + (TG)n Simple_repeat Simple_repeat 2 31 0 2211 132 3 0 chr2 25590886 25591189 -227665394 + AluSx SINE Alu 1 304 -8 720 125 0 9 chr2 25593662 25593774 -227662809 - FLAM_A SINE Alu -4 138 28 2284 112 7 0 chr2 25594099 25594404 -227662179 - AluSx SINE Alu -2 310 4 2297 121 0 0 chr2 25597230 25597537 -227659046 + AluSx SINE Alu 1 307 -5 219 319 127 24 chr2 25598161 25598287 -227658296 - MIR SINE MIR -57 205 68 198 103 0 0 chr2 25599394 25599423 -227657160 + (CTG)n Simple_repeat Simple_repeat 3 31 0 2159 113 0 25 chr2 25599973 25600291 -227656292 + AluSx SINE Alu 1 310 -2 834 104 0 0 chr2 25600430 25600545 -227656038 + AluY SINE Alu 197 311 0 365 310 118 27 chr2 25600983 25601170 -227655413 - MIR3 SINE MIR 0 208 5 1343 144 0 5 chr2 25601429 25601631 -227654952 + AluSg/x SINE Alu 110 310 -2 318 191 16 0 chr2 25602330 25602393 -227654190 - AluJ/FLAM SINE Alu -218 84 21 741 273 10 19 chr2 25602395 25602436 -227654147 - MLT1G LTR MaLR 0 590 550 1719 98 4 18 chr2 25602436 25602661 -227653922 - AluSg/x SINE Alu -15 295 74 741 273 10 19 chr2 25602661 25602824 -227653759 - MLT1G LTR MaLR -40 550 388 2138 144 0 0 chr2 25602824 25603123 -227653460 + AluSx SINE Alu 1 299 -13 185 284 9 73 chr2 25603476 25603585 -227652998 + L3 LINE CR1 633 734 -843 303 344 13 4 chr2 25603876 25604041 -227652542 + L1ME4a LINE L1 5432 5591 -530 527 88 20 20 chr2 25604065 25604167 -227652416 + (TTTC)n Simple_repeat Simple_repeat 1 102 0 1953 153 0 0 chr2 25604177 25604477 -227652106 - AluSx SINE Alu 0 312 13 1585 188 3 38 chr2 25604670 25604957 -227651626 + AluJo SINE Alu 1 277 -35 291 93 0 0 chr2 25604957 25605000 -227651583 + (TAA)n Simple_repeat Simple_repeat 1 43 0 1585 188 3 38 chr2 25605000 25605032 -227651551 + AluJo SINE Alu 277 309 -3 276 337 47 0 chr2 25605086 25605172 -227651411 + L2 LINE L2 3197 3286 -27 381 362 93 41 chr2 25605257 25605525 -227651058 + L1ME4a LINE L1 5840 6121 0 2171 121 0 3 chr2 25605525 25605838 -227650745 + AluJb SINE Alu 1 312 0 289 231 27 21 chr2 25605873 25605967 -227650616 + MLT1G3 LTR MaLR 451 590 0 471 298 44 58 chr2 25606106 25606311 -227650272 - L2 LINE L2 -1 3312 3111 373 242 152 12 chr2 25606385 25606550 -227650033 + HAL1 LINE L1 2025 2212 -295 180 253 44 44 chr2 25606711 25606802 -227649781 - L2 LINE L2 -2 3311 3221 1566 183 47 4 chr2 25606932 25607211 -227649372 - AluJo SINE Alu -21 291 1 278 363 48 0 chr2 25608328 25608452 -227648131 - MIR3 SINE MIR -15 193 64 2334 70 0 0 chr2 25611159 25611459 -227645124 + AluSp SINE Alu 1 300 -13 1548 160 12 89 chr2 25613542 25613867 -227642716 - AluJb SINE Alu -12 300 1 2258 75 0 0 chr2 25613951 25614244 -227642339 + AluSc SINE Alu 1 293 -16 267 315 87 0 chr2 25614437 25614529 -227642054 - LTR67 LTR ERVL -293 264 165 871 264 17 30 chr2 25614535 25614830 -227641753 - L1M4 LINE L1 -2250 3896 3606 1084 172 48 131 chr2 25614933 25615088 -227641495 - AluJo SINE Alu -13 289 123 198 0 0 0 chr2 25615088 25615110 -227641473 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 1947 121 0 27 chr2 25615117 25615415 -227641168 - AluSx SINE Alu -22 290 1 2211 87 0 20 chr2 25615418 25615718 -227640865 - AluSx SINE Alu -13 299 6 1084 172 48 131 chr2 25615718 25615864 -227640719 - AluJo SINE Alu -187 115 2 392 229 150 0 chr2 25615913 25616053 -227640530 - L1ME4a LINE L1 -223 5898 5738 2074 127 7 0 chr2 25616821 25617121 -227639462 - AluSx SINE Alu -10 302 1 186 43 0 0 chr2 25617524 25617547 -227639036 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 2115 105 20 0 chr2 25617555 25617851 -227638732 - AluSx SINE Alu -10 302 1 280 316 15 41 chr2 25617921 25618117 -227638466 + L1MC5 LINE L1 7587 7777 -184 183 235 20 20 chr2 25619623 25619674 -227636909 + MER5A DNA MER1_type 136 186 -3 2186 109 0 10 chr2 25619679 25619992 -227636591 - AluSx SINE Alu -2 310 1 1868 125 0 14 chr2 25620971 25621251 -227635332 - AluSx SINE Alu -36 276 1 1705 171 3 16 chr2 25621533 25621838 -227634745 - AluJb SINE Alu -3 309 9 2130 77 50 17 chr2 25623408 25623706 -227632877 + AluSq SINE Alu 1 308 -5 198 271 17 17 chr2 25623828 25623887 -227632696 - MER5B DNA MER1_type -17 161 103 * 270 228 38 13 chr2 25623834 25623913 -227632670 + MER5A DNA MER1_type 35 115 -74 626 282 43 27 chr2 25624187 25624375 -227632208 - MER91A DNA MER1_type -4 192 2 21 36 0 0 chr2 25625794 25625822 -227630761 + GC_rich Low_complexity Low_complexity 1 28 0 246 132 40 26 chr2 25625888 25625964 -227630619 + (CCCCG)n Simple_repeat Simple_repeat 5 81 0 674 264 158 18 chr2 25626839 25627123 -227629460 + MER5C DNA MER1_type 1 324 0 307 313 20 0 chr2 25628238 25628337 -227628246 + GA-rich Low_complexity Low_complexity 2 102 0 699 164 8 16 chr2 25628453 25628581 -227628002 + AluSg/x SINE Alu 180 306 -4 420 31 47 0 chr2 25628813 25628877 -227627706 - L1PB2 LINE L1 -2 6149 6083 2360 60 10 10 chr2 25628880 25629180 -227627403 - AluY SINE Alu -11 300 1 251 287 32 51 chr2 25629215 25629372 -227627211 - L1ME4a LINE L1 -366 5755 5602 1971 124 3 3 chr2 25629816 25630158 -227626425 + AluSx SINE Alu 1 342 0 2235 92 7 0 chr2 25630662 25630957 -227625626 - AluSp SINE Alu -16 297 1 1031 89 0 0 chr2 25631306 25631441 -227625142 - AluSq/x SINE Alu -178 135 1 180 0 0 0 chr2 25631584 25631604 -227624979 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1833 133 0 14 chr2 25631609 25631888 -227624695 - AluSx SINE Alu -37 275 1 281 315 132 42 chr2 25632257 25632546 -227624037 - L3 LINE CR1 -346 1231 917 260 250 0 0 chr2 25633076 25633116 -227623467 + A-rich Low_complexity Low_complexity 1 40 0 2060 78 11 0 chr2 25633770 25634052 -227622531 + AluSp SINE Alu 28 312 -1 734 116 25 8 chr2 25634060 25634181 -227622402 - FLAM_C SINE Alu -7 126 4 214 253 13 109 chr2 25635745 25635902 -227620681 + MIR SINE MIR 68 210 -52 1862 118 45 3 chr2 25635910 25636197 -227620386 + AluSx SINE Alu 1 299 -13 29 28 0 0 chr2 25636489 25636525 -227620058 + AT_rich Low_complexity Low_complexity 1 36 0 2216 77 0 17 chr2 25636563 25636863 -227619720 - AluSx SINE Alu -17 295 1 194 202 32 11 chr2 25636878 25636972 -227619611 + (TA)n Simple_repeat Simple_repeat 1 96 0 309 274 11 63 chr2 25636979 25637074 -227619509 + L1MC4 LINE L1 6613 6702 -1340 254 156 47 0 chr2 25638027 25638091 -227618492 + CT-rich Low_complexity Low_complexity 2 68 0 459 0 0 0 chr2 25638772 25638823 -227617760 + (A)n Simple_repeat Simple_repeat 1 51 0 22 0 0 0 chr2 25638852 25638874 -227617709 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr2 25639249 25639280 -227617303 + AT_rich Low_complexity Low_complexity 1 31 0 242 44 0 67 chr2 25644334 25644379 -227612204 + (A)n Simple_repeat Simple_repeat 1 42 0 2251 90 10 0 chr2 25645752 25646053 -227610530 - AluSx SINE Alu -8 304 1 2268 84 3 0 chr2 25646636 25646933 -227609650 - AluSx SINE Alu -14 298 1 369 257 30 10 chr2 25647926 25648027 -227608556 + L1ME1 LINE L1 6020 6122 -44 2137 102 10 0 chr2 25648054 25648348 -227608235 + AluSx SINE Alu 1 297 -15 754 197 138 37 chr2 25649985 25650173 -227606410 + MER3 DNA MER1_type 1 207 -2 664 184 0 0 chr2 25651833 25651936 -227604647 - AluJb SINE Alu -208 104 2 467 271 86 56 chr2 25653393 25653590 -227602993 + L1ME4a LINE L1 5619 5809 -312 2150 89 21 0 chr2 25653590 25653881 -227602702 + AluSg SINE Alu 1 297 -13 467 271 86 56 chr2 25653881 25654056 -227602527 + L1ME4a LINE L1 5809 6002 -119 2230 109 7 0 chr2 25659110 25659413 -227597170 - AluSx SINE Alu -7 305 1 1170 33 0 20 chr2 25659435 25659585 -227596998 - L1PA4 LINE L1 -3 6152 6006 639 134 80 27 chr2 25659697 25659809 -227596774 + FLAM_A SINE Alu 13 130 -12 233 282 0 39 chr2 25661689 25661792 -227594791 + G-rich Low_complexity Low_complexity 3 101 0 305 263 0 0 chr2 25662840 25662920 -227593663 + G-rich Low_complexity Low_complexity 1 80 0 21 0 0 0 chr2 25663049 25663070 -227593513 + GC_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 25663175 25663196 -227593387 + GC_rich Low_complexity Low_complexity 1 21 0 260 259 69 61 chr2 25664337 25664355 -227592228 + MIR SINE MIR 39 55 -163 2374 87 0 0 chr2 25664355 25664655 -227591928 + AluSg SINE Alu 1 300 -10 260 259 69 61 chr2 25664655 25664754 -227591829 + MIR SINE MIR 55 155 -63 230 337 39 22 chr2 25666851 25667020 -227589563 + L2 LINE L2 2884 3058 -214 969 198 88 5 chr2 25667020 25667212 -227589371 - MER3 DNA MER1_type -1 208 1 232 324 0 0 chr2 25667225 25667296 -227589287 + CT-rich Low_complexity Low_complexity 3 73 0 189 326 72 43 chr2 25667373 25667511 -227589072 + L2 LINE L2 3165 3306 -7 376 296 92 33 chr2 25668253 25668405 -227588178 - MER5B DNA MER1_type -12 166 6 194 129 0 0 chr2 25668427 25668458 -227588125 - MIR SINE MIR -69 139 109 294 331 145 18 chr2 25670837 25671003 -227585580 - MER5A DNA MER1_type -2 187 1 1053 118 0 33 chr2 25671430 25671583 -227585000 + FRAM SINE Alu 4 151 -25 2175 102 0 31 chr2 25671591 25671736 -227584847 + AluSx SINE Alu 1 149 -163 2370 99 0 0 chr2 25671736 25672040 -227584543 + AluSx SINE Alu 1 304 -8 2175 102 0 31 chr2 25672040 25672216 -227584367 + AluSx SINE Alu 149 312 0 2200 102 0 16 chr2 25672484 25672788 -227583795 + AluSc SINE Alu 1 299 -10 417 185 68 34 chr2 25672866 25673012 -227583571 + L1MC4a LINE L1 5051 5201 -945 1425 157 99 4 chr2 25673530 25673792 -227582791 - AluJo SINE Alu -2 310 24 229 354 102 0 chr2 25673935 25674062 -227582521 + L2 LINE L2 3088 3227 -45 2216 121 0 0 chr2 25674712 25675019 -227581564 - AluSx SINE Alu -5 307 1 2345 60 17 0 chr2 25675042 25675341 -227581242 - AluY SINE Alu -7 304 1 345 357 21 7 chr2 25675519 25675662 -227580921 - MIR3 SINE MIR -34 174 30 2271 91 3 3 chr2 25676116 25676414 -227580169 + AluSx SINE Alu 1 298 -14 209 262 0 0 chr2 25676459 25676501 -227580082 + L2 LINE L2 3211 3252 -20 202 287 98 49 chr2 25676976 25677119 -227579464 + L2 LINE L2 3159 3308 -5 760 304 161 8 chr2 25677237 25677760 -227578823 + L1MC4a LINE L1 5344 5801 -363 1834 165 3 3 chr2 25677871 25678162 -227578421 + AluJo SINE Alu 1 291 -21 193 281 94 0 chr2 25678330 25678394 -227578189 - L2 LINE L2 -1 3271 3202 235 190 79 65 chr2 25678482 25678567 -227578016 - MIR SINE MIR -52 156 70 1889 140 7 23 chr2 25679621 25679921 -227576662 + AluSx SINE Alu 3 297 -15 198 324 0 67 chr2 25679929 25680034 -227576549 - L2 LINE L2 -173 3099 3002 216 185 62 77 chr2 25680803 25680868 -227575715 - MIR3 SINE MIR -2 206 143 31 0 0 0 chr2 25682440 25682471 -227574112 + GC_rich Low_complexity Low_complexity 1 31 0 2131 95 7 0 chr2 25682582 25682867 -227573716 + AluSg SINE Alu 24 310 0 2093 107 7 17 chr2 25685316 25685616 -227570967 + AluSx SINE Alu 1 297 -15 1191 87 6 46 chr2 25685616 25685789 -227570794 + AluSg/x SINE Alu 132 297 -13 225 0 0 0 chr2 25686264 25686289 -227570294 + (A)n Simple_repeat Simple_repeat 1 25 0 393 294 34 20 chr2 25687983 25688129 -227568454 - MIR SINE MIR -113 149 2 288 313 0 27 chr2 25689164 25689276 -227567307 + L2 LINE L2 2981 3089 -183 2424 69 0 3 chr2 25690199 25690503 -227566080 - AluSx SINE Alu -9 303 1 395 289 110 43 chr2 25690620 25690848 -227565735 - MIR SINE MIR -19 243 3 231 235 103 15 chr2 25692616 25692684 -227563899 + MIR SINE MIR 16 89 -119 236 311 164 33 chr2 25693805 25694049 -227562534 + L2 LINE L2 2992 3267 -5 330 373 47 26 chr2 25694073 25694266 -227562317 + L3b LINE CR1 1304 1500 -83 436 301 33 7 chr2 25694367 25694520 -227562063 - MIR SINE MIR -41 221 65 1117 60 0 0 chr2 25696739 25696872 -227559711 + AluSx SINE Alu 1 133 -179 444 99 0 14 chr2 25696876 25696947 -227559636 + MER51B LTR ERV1 212 281 -96 1256 132 0 0 chr2 25696956 25697146 -227559437 + AluSx SINE Alu 123 312 0 306 405 23 0 chr2 25697390 25697563 -227559020 - L3 LINE CR1 -342 1235 1059 1037 160 18 0 chr2 25698258 25698427 -227558156 - AluJb SINE Alu -14 298 127 1825 147 10 3 chr2 25698444 25698736 -227557847 - AluSx SINE Alu -18 294 1 188 405 41 0 chr2 25698871 25698992 -227557591 + L2 LINE L2 2956 3081 -191 341 250 16 73 chr2 25700462 25700586 -227555997 + MIR SINE MIR 96 212 -50 239 296 0 61 chr2 25700691 25700789 -227555794 - MER5C DNA MER1_type 0 324 233 186 236 91 0 chr2 25700879 25700934 -227555649 + MER5C DNA MER1_type 2 61 -263 2368 85 3 0 chr2 25702267 25702572 -227554011 - AluSx SINE Alu -6 306 1 334 264 46 0 chr2 25702628 25702715 -227553868 - MIR SINE MIR -99 163 73 405 340 62 6 chr2 25702833 25702995 -227553588 - MIR SINE MIR -72 190 20 194 357 188 0 chr2 25704297 25704409 -227552174 + MIR SINE MIR 18 150 -58 2301 109 0 0 chr2 25704411 25704723 -227551860 + AluSx SINE Alu 1 312 0 395 309 23 47 chr2 25705154 25705222 -227551361 - L1MC4 LINE L1 -160 7801 7733 914 121 0 0 chr2 25705222 25705346 -227551237 + FLAM_C SINE Alu 1 124 -9 395 309 23 47 chr2 25705346 25705357 -227551226 - L1MC4 LINE L1 -228 7733 7723 22 35 0 0 chr2 25705357 25705386 -227551197 + AT_rich Low_complexity Low_complexity 1 29 0 395 309 23 47 chr2 25705386 25705542 -227551041 - L1MC4 LINE L1 -238 7723 6608 2154 103 10 10 chr2 25705752 25706062 -227550521 + AluY SINE Alu 2 311 0 279 139 0 0 chr2 25707693 25707736 -227548847 + MIR SINE MIR 106 148 -114 321 206 0 27 chr2 25707778 25707851 -227548732 + L2 LINE L2 3201 3271 -42 399 354 0 8 chr2 25708663 25708793 -227547790 + L3 LINE CR1 618 746 -831 32 43 0 0 chr2 25709225 25709271 -227547312 + GC_rich Low_complexity Low_complexity 1 46 0 482 270 44 19 chr2 25709668 25709827 -227546756 + L3 LINE CR1 1407 1569 -8 248 241 230 0 chr2 25710543 25710630 -227545953 + L2 LINE L2 3161 3267 -5 618 265 157 10 chr2 25710787 25710991 -227545592 - MIR SINE MIR 0 262 29 1846 160 0 10 chr2 25711004 25711311 -227545272 - AluJo SINE Alu -8 304 1 2247 100 3 0 chr2 25711360 25711660 -227544923 + AluSx SINE Alu 5 305 -7 415 114 14 0 chr2 25712065 25712135 -227544448 - MLT1I LTR MaLR -8 401 331 3321 123 37 78 chr2 25712135 25712266 -227544317 + L1MB3 LINE L1 5566 5701 -482 2278 105 0 0 chr2 25712266 25712572 -227544011 - AluSq SINE Alu -7 306 1 3321 123 37 78 chr2 25712572 25713027 -227543556 + L1MB3 LINE L1 5701 6173 -10 2345 74 0 0 chr2 25713027 25713325 -227543258 + AluY SINE Alu 1 298 -13 2190 111 0 0 chr2 25713328 25713625 -227542958 + AluSq SINE Alu 3 299 -14 2274 76 0 3 chr2 25713625 25713916 -227542667 + AluSc SINE Alu 1 290 -19 3321 123 37 78 chr2 25713916 25713967 -227542616 + L1MB3 LINE L1 6173 6183 0 253 214 36 150 chr2 25713999 25714139 -227542444 - MLT1I LTR MaLR -54 355 232 295 238 99 10 chr2 25714193 25714294 -227542289 - MLT1I LTR MaLR -299 110 1 304 276 32 77 chr2 25714897 25715053 -227541530 - MLT1K LTR MaLR -163 425 277 195 42 0 0 chr2 25715169 25715193 -227541390 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 245 296 12 0 chr2 25715232 25715313 -227541270 - MLT1K LTR MaLR -324 264 183 2257 97 0 3 chr2 25715507 25715816 -227540767 - AluSc SINE Alu -1 308 1 544 211 0 44 chr2 25715816 25715973 -227540610 + L1MB5 LINE L1 6040 6184 0 2447 229 90 57 chr2 25716862 25717120 -227539463 + L1MC4 LINE L1 6637 6885 -900 2393 142 31 68 chr2 25717120 25717455 -227539128 + MSTB1 LTR MaLR 5 322 -110 2184 126 7 0 chr2 25717455 25717765 -227538818 - AluSx SINE Alu 0 312 1 2393 142 31 68 chr2 25717765 25717873 -227538710 + MSTB1 LTR MaLR 322 432 0 2447 229 90 57 chr2 25717873 25718499 -227538084 + L1MC4 LINE L1 6885 7489 -296 2249 108 0 6 chr2 25718499 25718813 -227537770 + AluSx SINE Alu 1 312 0 2447 229 90 57 chr2 25718813 25718854 -227537729 + L1MC4 LINE L1 7489 7527 -258 2214 98 7 3 chr2 25718854 25719160 -227537423 + AluSc SINE Alu 3 309 0 2447 229 90 57 chr2 25719160 25719231 -227537352 + L1MC4 LINE L1 7527 7649 -136 260 164 0 0 chr2 25719247 25719302 -227537281 + L1MC4 LINE L1 7988 8042 0 * 673 246 175 4 chr2 25719300 25719568 -227537015 - L1MC/D LINE L1 -2230 5578 5265 1588 199 98 62 chr2 25719944 25720233 -227536350 - L1MD1 LINE L1 0 6242 5965 2410 74 0 16 chr2 25720233 25720545 -227536038 + AluY SINE Alu 1 307 -4 2147 128 0 3 chr2 25720554 25720867 -227535716 + AluSx SINE Alu 1 312 0 1588 199 98 62 chr2 25720867 25721086 -227535497 - L1MD1 LINE L1 -284 5958 5705 2217 87 0 45 chr2 25721358 25721669 -227534914 + AluSx SINE Alu 1 297 -15 1653 227 128 42 chr2 25722056 25722602 -227533981 - MLT1E LTR MaLR 0 593 1 1666 162 61 82 chr2 25723400 25723772 -227532811 + MSTA LTR MaLR 13 391 -37 2182 102 0 0 chr2 25723772 25724088 -227532495 - AluSx SINE Alu 0 316 1 2203 112 0 3 chr2 25724094 25724406 -227532177 - AluY SINE Alu 0 311 1 1666 162 61 82 chr2 25724406 25724450 -227532133 + MSTA LTR MaLR 396 428 0 1200 205 31 87 chr2 25724471 25724677 -227531906 + MLT1D LTR MaLR 1 176 -329 2247 106 3 0 chr2 25724677 25724980 -227531603 + AluSx SINE Alu 1 304 -8 1200 205 31 87 chr2 25724980 25725163 -227531420 + MLT1D LTR MaLR 176 368 -137 361 322 33 10 chr2 25725201 25725362 -227531221 + MIR3 SINE MIR 13 176 -78 201 311 68 10 chr2 25725528 25725631 -227530952 - MIR SINE MIR -57 151 43 201 308 22 33 chr2 25725684 25725775 -227530808 + MIR3 SINE MIR 5 94 -114 249 337 54 0 chr2 25725776 25725868 -227530715 + MIR SINE MIR 150 246 -16 2150 119 0 3 chr2 25726004 25726315 -227530268 - AluSg SINE Alu 0 310 1 185 277 234 0 chr2 25726332 25726426 -227530157 - MIR SINE MIR -65 143 28 1269 77 0 0 chr2 25727657 25727813 -227528770 + AluSp SINE Alu 129 284 -29 1570 147 10 34 chr2 25727870 25728162 -227528421 + AluSq SINE Alu 21 305 -8 182 325 26 61 chr2 25728327 25728441 -227528142 + MIR SINE MIR 36 145 -63 278 213 43 43 chr2 25728683 25728777 -227527806 + L1MC5 LINE L1 7832 7925 -36 2210 102 0 0 chr2 25728782 25729076 -227527507 - AluSx SINE Alu -18 294 1 1044 151 33 142 chr2 25729589 25729802 -227526781 - AluSg SINE Alu 0 300 136 2329 91 0 3 chr2 25729802 25730109 -227526474 - AluSq SINE Alu -7 306 1 1044 151 33 142 chr2 25730109 25730232 -227526351 - AluSg SINE Alu -164 136 1 515 312 214 18 chr2 25730493 25731162 -227525421 + L2 LINE L2 1804 2603 -711 703 310 190 18 chr2 25731163 25731636 -227524947 + L2 LINE L2 2731 3272 0 235 313 72 0 chr2 25732502 25732585 -227523998 - L2 LINE L2 -5 3308 3220 424 265 34 8 chr2 25732912 25733029 -227523554 + MIR3 SINE MIR 88 207 -1 259 284 197 8 chr2 25733129 25733256 -227523327 + MIR SINE MIR 105 255 -7 312 264 165 60 chr2 25734508 25734690 -227521893 - MIR3 SINE MIR -6 202 2 390 21 0 0 chr2 25734830 25734877 -227521706 + (CA)n Simple_repeat Simple_repeat 1 47 0 441 270 0 10 chr2 25735266 25735366 -227521217 + MIR SINE MIR 58 156 -106 2118 120 0 13 chr2 25735372 25735673 -227520910 + AluSx SINE Alu 1 297 -15 439 278 199 0 chr2 25735711 25735862 -227520721 - MER5A DNA MER1_type 0 189 9 2095 131 0 13 chr2 25736507 25736819 -227519764 - AluSx SINE Alu -4 308 1 291 85 0 0 chr2 25737121 25737168 -227519415 + (C)n Simple_repeat Simple_repeat 1 47 0 385 320 24 48 chr2 25737416 25737622 -227518961 + L2 LINE L2 3111 3311 -2 362 339 36 23 chr2 25738034 25738252 -227518331 + MIR SINE MIR 35 255 -7 181 284 156 28 chr2 25738418 25738527 -227518056 + MIR SINE MIR 136 258 -4 739 279 42 48 chr2 25738805 25739135 -227517448 - MER102b DNA MER1_type 0 341 14 2155 113 7 0 chr2 25739909 25740211 -227516372 + AluSx SINE Alu 1 304 -8 219 342 18 11 chr2 25740707 25740842 -227515741 - MIR SINE MIR -72 136 2 199 277 17 6 chr2 25741046 25741111 -227515472 + MIR SINE MIR 93 159 -49 302 266 51 0 chr2 25741138 25741192 -227515391 - L1ME4a LINE L1 0 6121 6060 2078 119 26 26 chr2 25741192 25741503 -227515080 + AluSx SINE Alu 1 311 -1 302 266 51 0 chr2 25741503 25741527 -227515056 - L1ME4a LINE L1 -61 6060 6039 431 293 223 0 chr2 25741705 25742005 -227514578 - L1MC4a LINE L1 -1878 5930 5564 189 0 0 0 chr2 25742181 25742202 -227514381 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 183 314 16 91 chr2 25743724 25743845 -227512738 + L2 LINE L2 3186 3297 -16 931 161 50 55 chr2 25744401 25744619 -227511964 + MER20 DNA MER1_type 3 219 0 2153 109 7 3 chr2 25744667 25744961 -227511622 - AluSq SINE Alu -18 295 1 752 175 131 8 chr2 25744991 25745223 -227511360 - L1MB3 LINE L1 -7 6173 5915 2301 68 17 0 chr2 25745458 25745751 -227510832 - AluSx SINE Alu -14 298 1 1024 194 18 127 chr2 25746316 25746656 -227509927 - AluJo SINE Alu -9 303 1 1835 109 3 25 chr2 25746672 25746955 -227509628 - AluSx SINE Alu -12 300 24 323 287 171 8 chr2 25747089 25747218 -227509365 + MIR SINE MIR 103 252 -10 247 339 173 36 chr2 25747598 25747905 -227508678 + L2 LINE L2 2911 3259 -13 289 303 31 71 chr2 25748306 25748524 -227508059 - MIR3 SINE MIR -50 212 3 183 267 89 33 chr2 25749289 25749379 -227507204 + L2 LINE L2 3162 3256 -16 249 159 23 0 chr2 25749844 25749888 -227506695 + MIR SINE MIR 105 149 -113 641 199 64 21 chr2 25750142 25750283 -227506300 - AluSx SINE Alu -159 153 7 2194 115 3 0 chr2 25750291 25750596 -227505987 - AluSq SINE Alu -7 306 1 348 127 0 0 chr2 25750991 25751046 -227505537 + (TAGG)n Simple_repeat Simple_repeat 4 58 0 333 68 0 0 chr2 25751797 25751841 -227504742 + (CA)n Simple_repeat Simple_repeat 1 44 0 274 274 21 32 chr2 25752096 25752191 -227504392 + GA-rich Low_complexity Low_complexity 2 95 0 640 265 32 60 chr2 25752419 25752603 -227503980 + MIR SINE MIR 20 197 -65 2191 71 14 20 chr2 25752603 25752900 -227503683 + AluY SINE Alu 1 295 -16 640 265 32 60 chr2 25752900 25752964 -227503619 + MIR SINE MIR 197 261 -1 204 313 94 10 chr2 25753474 25753570 -227503013 - L2 LINE L2 -1 3312 3209 732 201 103 17 chr2 25753601 25753775 -227502808 - MER5A DNA MER1_type 0 189 1 203 130 0 22 chr2 25753941 25753987 -227502596 + (CGGGGG)n Simple_repeat Simple_repeat 2 46 0 406 298 71 61 chr2 25754538 25754736 -227501847 - MIR SINE MIR -57 205 6 194 209 77 0 chr2 25755450 25755514 -227501069 + MIR SINE MIR 116 185 -77 249 346 10 10 chr2 25756349 25756450 -227500133 - MIR SINE MIR -76 132 32 220 295 338 0 chr2 25756501 25756640 -227499943 + MIR SINE MIR 6 191 -71 180 298 0 0 chr2 25758810 25758857 -227497726 + MIR3 SINE MIR 109 155 -53 721 287 217 51 chr2 25759826 25759879 -227496704 + HAL1 LINE L1 24 67 -2440 1626 161 7 20 chr2 25759879 25760184 -227496399 - AluJo SINE Alu -11 301 1 721 287 217 51 chr2 25760184 25760557 -227496026 + HAL1 LINE L1 67 376 -2131 2238 80 7 0 chr2 25760557 25760856 -227495727 - AluSp SINE Alu -12 301 1 721 287 217 51 chr2 25760856 25761100 -227495483 + HAL1 LINE L1 376 807 -1700 2092 115 3 0 chr2 25761103 25761408 -227495175 - AluSx SINE Alu -6 306 1 398 229 190 78 chr2 25761436 25761509 -227495074 + HAL1 LINE L1 1567 1630 -877 2339 87 0 6 chr2 25761509 25761821 -227494762 - AluY SINE Alu -1 310 1 2396 75 0 0 chr2 25761827 25762134 -227494449 - AluY SINE Alu -2 309 3 970 103 0 22 chr2 25762136 25762272 -227494311 - AluJo/FLAM SINE Alu -169 133 1 398 229 190 78 chr2 25762272 25762472 -227494111 + HAL1 LINE L1 1634 1882 -625 2148 119 0 0 chr2 25762581 25762892 -227493691 - AluSx SINE Alu -1 311 1 753 233 65 122 chr2 25762925 25763193 -227493390 + HAL1 LINE L1 1697 1924 -583 1005 117 0 0 chr2 25763193 25763338 -227493245 + L1MA6 LINE L1 6156 6300 0 753 233 65 122 chr2 25763338 25763579 -227493004 + HAL1 LINE L1 1924 2177 -330 198 167 0 0 chr2 25763579 25763615 -227492968 + (TATG)n Simple_repeat Simple_repeat 3 38 0 2365 145 18 59 chr2 25763636 25763672 -227492911 - MLT1D LTR MaLR -32 473 437 2305 71 0 3 chr2 25763672 25763967 -227492616 + AluSp SINE Alu 1 294 -19 2365 145 18 59 chr2 25763967 25764421 -227492162 - MLT1D LTR MaLR -68 437 3 1505 158 62 4 chr2 25764441 25764714 -227491869 + AluJo SINE Alu 1 289 -23 749 231 62 33 chr2 25764809 25765051 -227491532 + HAL1 LINE L1 2258 2506 -1 197 212 227 0 chr2 25765119 25765185 -227491398 + MIR3 SINE MIR 117 197 -11 393 260 156 12 chr2 25765922 25766095 -227490488 + MLT1K LTR MaLR 211 408 -180 656 293 80 5 chr2 25766268 25766480 -227490103 + MIR SINE MIR 35 262 0 779 221 11 47 chr2 25766572 25766788 -227489795 - MIR SINE MIR -18 244 37 798 242 62 9 chr2 25767018 25767229 -227489354 - MIR SINE MIR -13 249 28 1184 302 21 42 chr2 25768359 25768914 -227487669 + ERVL LTR ERVL 4813 5399 -153 410 0 20 0 chr2 25768930 25768980 -227487603 + (TG)n Simple_repeat Simple_repeat 2 52 0 2020 207 56 132 chr2 25769288 25770124 -227486459 + LTR41 LTR ERVL 1 773 0 447 124 56 0 chr2 25770951 25771040 -227485543 + L1MB7 LINE L1 6091 6184 0 300 53 0 0 chr2 25771754 25771792 -227484791 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 10161 169 19 0 chr2 25771792 25772983 -227483600 + L1PB1 LINE L1 3193 4361 -1790 234 0 0 0 chr2 25772983 25773009 -227483574 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 10161 169 19 0 chr2 25773009 25774728 -227481855 + L1PB1 LINE L1 4361 6151 0 243 200 12 38 chr2 25774746 25774826 -227481757 + (TA)n Simple_repeat Simple_repeat 1 78 0 328 253 42 21 chr2 25774842 25774937 -227481646 + L1MC4 LINE L1 6603 6699 -1343 3184 71 9 43 chr2 25775323 25775590 -227480993 + L1PB1 LINE L1 5706 5952 -199 1926 135 0 0 chr2 25775590 25775872 -227480711 + AluSx SINE Alu 21 302 -10 3184 71 9 43 chr2 25775872 25776066 -227480517 + L1PB1 LINE L1 5952 6151 0 207 0 0 0 chr2 25776073 25776096 -227480487 + (A)n Simple_repeat Simple_repeat 1 23 0 751 151 16 8 chr2 25776404 25776562 -227480021 + L1MB8 LINE L1 5595 5748 -416 860 153 0 0 chr2 25776562 25776706 -227479877 + AluSg/x SINE Alu 164 307 -3 589 200 8 24 chr2 25776706 25776844 -227479739 + L1MB8 LINE L1 5865 5989 -182 2216 101 7 0 chr2 25776939 25777246 -227479337 + AluSx SINE Alu 1 309 -3 204 220 20 40 chr2 25778232 25778282 -227478301 + L2 LINE L2 3264 3312 -1 2187 82 7 14 chr2 25778399 25778691 -227477892 - AluSc SINE Alu -19 290 1 1811 146 24 0 chr2 25778691 25778979 -227477604 - AluSx SINE Alu -17 295 1 351 189 68 10 chr2 25779023 25779137 -227477446 + MLT1F1 LTR MaLR 1 116 -451 374 241 125 9 chr2 25780377 25780489 -227476094 - MIR3 SINE MIR -49 159 35 210 219 0 0 chr2 25780900 25780941 -227475642 + L2 LINE L2 3255 3295 -18 2213 89 0 0 chr2 25782465 25782756 -227473827 - AluSx SINE Alu -21 291 1 746 183 48 81 chr2 25783091 25783138 -227473445 + MIR SINE MIR 5 52 -210 768 181 0 0 chr2 25783138 25783271 -227473312 - FLAM_A SINE Alu 0 133 1 746 183 48 81 chr2 25783271 25783409 -227473174 + MIR SINE MIR 52 184 -78 2245 95 0 0 chr2 25783913 25784209 -227472374 + AluSq SINE Alu 1 296 -17 1622 158 54 30 chr2 25784271 25784568 -227472015 - AluJb SINE Alu -8 304 1 1968 114 7 0 chr2 25784599 25784899 -227471684 + AluSx SINE Alu 1 302 0 433 196 131 19 chr2 25784953 25785106 -227471477 + MER58 DNA MER1_type 50 2420 0 320 242 16 0 chr2 25785609 25785671 -227470912 + MER20 DNA MER1_type 79 141 -78 1731 60 0 14 chr2 25785674 25785892 -227470691 + AluSp SINE Alu 86 300 -13 284 97 0 161 chr2 25785892 25785954 -227470629 + AluSq/x SINE Alu 78 129 -173 241 312 0 13 chr2 25785963 25786040 -227470543 + MER20 DNA MER1_type 138 213 -6 29 47 0 0 chr2 25786324 25786367 -227470216 + AT_rich Low_complexity Low_complexity 1 43 0 5584 118 11 4 chr2 25786449 25787272 -227469311 + L1PB3 LINE L1 5326 6154 0 387 148 0 0 chr2 25787308 25787362 -227469221 + AluSx SINE Alu 32 85 -217 2166 104 0 10 chr2 25787363 25787661 -227468922 + AluSp SINE Alu 1 295 -18 1571 111 0 37 chr2 25787661 25787903 -227468680 + AluSx SINE Alu 71 305 -5 330 26 0 0 chr2 25788567 25788606 -227467977 + (TTCA)n Simple_repeat Simple_repeat 2 40 0 342 339 132 29 chr2 25788918 25789425 -227467158 + L2 LINE L2 1835 2484 -830 631 242 27 0 chr2 25789775 25789924 -227466659 + LTR23-int LTR ERV1 4971 5123 0 1262 172 26 4 chr2 25789925 25790157 -227466426 + LTR23 LTR ERV1 1 237 -200 332 114 0 0 chr2 25790175 25790219 -227466364 - MER4E LTR ERV1 -70 696 653 953 129 17 39 chr2 25790220 25790398 -227466185 + LTR23 LTR ERV1 226 399 -38 2241 105 0 0 chr2 25790416 25790722 -227465861 + AluSq SINE Alu 1 306 -7 7490 34 14 0 chr2 25792610 25793588 -227462995 - L1PA5 LINE L1 -3 6151 5183 2190 88 7 7 chr2 25793588 25793893 -227462690 - AluY SINE Alu -6 305 1 398 275 22 0 chr2 25794073 25794164 -227462419 - L2 LINE L2 -6 3266 3174 1242 174 11 76 chr2 25794519 25794581 -227462002 + MER21B LTR ERV1 1 65 -798 1672 95 0 0 chr2 25794581 25794802 -227461781 - AluSg/x SINE Alu -7 305 85 1242 174 11 76 chr2 25794802 25795003 -227461580 + MER21B LTR ERV1 65 247 -616 341 256 56 24 chr2 25795104 25795229 -227461354 + L1MEc LINE L1 606 734 -5662 1449 266 59 35 chr2 25795280 25795973 -227460610 + L1MEc LINE L1 1429 2138 -4258 1077 275 8 5 chr2 25795978 25796352 -227460231 + L1MEc LINE L1 2362 2736 -3479 1823 110 53 7 chr2 25796926 25797208 -227459375 - AluSg SINE Alu -15 295 1 335 353 50 27 chr2 25797699 25797920 -227458663 + MIR SINE MIR 18 243 -19 543 147 63 11 chr2 25798140 25798235 -227458348 - THE1C LTR MaLR -275 100 1 367 336 83 6 chr2 25798253 25798604 -227457979 - L1ME LINE L1 -365 5756 5379 360 324 87 0 chr2 25798632 25798805 -227457778 - MIR SINE MIR -13 249 62 235 354 135 0 chr2 25799655 25799751 -227456832 + L2 LINE L2 3155 3263 -9 885 164 77 72 chr2 25800732 25800940 -227455643 + MER58A DNA MER1_type 1 209 -15 1591 179 16 35 chr2 25801121 25801439 -227455144 + AluJo SINE Alu 1 312 0 2111 121 0 10 chr2 25802094 25802401 -227454182 - AluSx SINE Alu -8 304 1 1918 124 0 41 chr2 25803112 25803426 -227453157 - AluSx SINE Alu -11 301 1 2473 234 42 28 chr2 25803753 25804404 -227452179 + MER21B LTR ERV1 156 815 -48 2041 110 20 0 chr2 25804572 25804864 -227451719 + AluSx SINE Alu 1 298 -14 561 15 0 0 chr2 25804966 25805032 -227451551 + (GGAA)n Simple_repeat Simple_repeat 1 66 0 22 0 0 0 chr2 25805630 25805652 -227450931 + AT_rich Low_complexity Low_complexity 1 22 0 657 215 12 1 chr2 25806046 25806194 -227450389 + MLT1I LTR MaLR 18 166 -243 209 206 0 63 chr2 25806429 25806492 -227450091 + CT-rich Low_complexity Low_complexity 2 60 0 2293 85 0 0 chr2 25806601 25806895 -227449688 + AluSg SINE Alu 1 294 -16 333 213 111 46 chr2 25807941 25808049 -227448534 - MIR3 SINE MIR -23 185 71 692 215 79 17 chr2 25808150 25808327 -227448256 + MER5A DNA MER1_type 2 189 0 1957 128 63 33 chr2 25808715 25809530 -227447053 + SVA Other Other 458 868 -518 5984 107 35 36 chr2 25809562 25810518 -227446065 + SVA Other Other 432 1386 0 288 70 0 0 chr2 25810538 25810581 -227446002 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 191 269 121 50 chr2 25810856 25810997 -227445586 - L2 LINE L2 -450 2864 2714 189 0 0 0 chr2 25811166 25811187 -227445396 + (TTTTC)n Simple_repeat Simple_repeat 5 25 0 1545 160 4 15 chr2 25811187 25811449 -227445134 - AluJb SINE Alu -48 264 6 2196 112 31 0 chr2 25811925 25812219 -227444364 - AluSx SINE Alu -9 303 1 241 204 0 0 chr2 25812776 25812825 -227443758 + U5 snRNA snRNA 1 49 -67 306 211 110 55 chr2 25813075 25813184 -227443399 - MIR3 SINE MIR -23 185 71 686 220 79 17 chr2 25813285 25813462 -227443121 + MER5A DNA MER1_type 2 189 0 234 0 0 0 chr2 25813580 25813606 -227442977 + (T)n Simple_repeat Simple_repeat 1 26 0 564 42 0 0 chr2 25813781 25813852 -227442731 + (TCTA)n Simple_repeat Simple_repeat 3 73 0 1478 137 133 4 chr2 25813852 25814100 -227442483 - AluJb SINE Alu -32 280 1 2234 116 26 0 chr2 25815714 25816017 -227440566 - AluSx SINE Alu -1 311 1 1174 136 35 0 chr2 25816201 25816370 -227440213 - AluSx SINE Alu -137 175 1 192 40 0 0 chr2 25816699 25816724 -227439859 + (CCA)n Simple_repeat Simple_repeat 1 25 0 545 133 22 33 chr2 25817348 25817438 -227439145 + FRAM SINE Alu 20 108 -68 1203 144 20 0 chr2 25817562 25817757 -227438826 + MLT2B3 LTR ERVL 1 199 -355 392 303 15 0 chr2 25817761 25817893 -227438690 - L1ME3A LINE L1 -328 5842 5709 1004 215 26 32 chr2 25817896 25818209 -227438374 + MLT2B2 LTR ERVL 258 515 0 1868 138 0 17 chr2 25818302 25818592 -227437991 + AluSx SINE Alu 1 285 -27 396 0 0 0 chr2 25818592 25818636 -227437947 + (CA)n Simple_repeat Simple_repeat 2 45 0 366 298 158 18 chr2 25819086 25819257 -227437326 + MIR SINE MIR 26 220 -42 206 157 0 20 chr2 25819585 25819636 -227436947 + (TCTCTG)n Simple_repeat Simple_repeat 1 50 0 2348 93 3 3 chr2 25819843 25820144 -227436439 - AluSx SINE Alu -11 301 1 327 326 134 17 chr2 25820166 25820338 -227436245 + MIR SINE MIR 20 211 -51 1214 254 35 0 chr2 25820447 25820758 -227435825 + MER33 DNA MER1_type 1 322 -2 228 205 60 0 chr2 25821507 25821590 -227434993 + (TA)n Simple_repeat Simple_repeat 2 89 0 230 292 138 0 chr2 25822488 25822618 -227433965 - L1ME3A LINE L1 -963 5183 5036 1094 56 0 0 chr2 25822618 25822743 -227433840 - AluSp/q SINE Alu -17 296 172 338 320 93 7 chr2 25822743 25822893 -227433690 - L1ME3A LINE L1 -1102 5044 4882 342 0 0 0 chr2 25823619 25823657 -227432926 + (CA)n Simple_repeat Simple_repeat 2 39 0 22 0 0 0 chr2 25824930 25824952 -227431631 + AT_rich Low_complexity Low_complexity 1 22 0 2411 199 83 21 chr2 25825493 25825814 -227430769 - L1ME1 LINE L1 -6 6160 5860 851 155 75 43 chr2 25825814 25825975 -227430608 - FRAM SINE Alu 0 166 1 2411 199 83 21 chr2 25825975 25826307 -227430276 - L1ME1 LINE L1 -306 5860 5467 3305 156 160 19 chr2 25826369 25826436 -227430147 - L1MB7 LINE L1 0 6184 6128 2102 141 3 3 chr2 25826436 25826733 -227429850 - AluSx SINE Alu -15 297 1 3305 156 160 19 chr2 25826733 25827417 -227429166 - L1MB7 LINE L1 -56 6128 5326 2189 127 3 0 chr2 25827471 25827770 -227428813 + AluSg SINE Alu 4 303 -7 454 266 167 26 chr2 25828099 25828291 -227428292 - MIR SINE MIR -43 219 1 596 159 29 72 chr2 25829835 25829973 -227426610 + AluJ SINE Alu 2 133 -169 2038 108 0 0 chr2 25829993 25830252 -227426331 + AluSg SINE Alu 1 259 -51 1096 182 0 30 chr2 25830321 25830519 -227426064 + AluJ SINE Alu 120 311 -1 2306 110 0 0 chr2 25831054 25831353 -227425230 - AluSx SINE Alu -13 299 1 486 287 12 12 chr2 25831575 25831742 -227424841 - Charlie8 DNA MER1_type -2214 203 37 524 154 0 0 chr2 25832280 25832358 -227424225 - AluSg/x SINE Alu -13 296 219 2043 92 0 8 chr2 25832361 25832622 -227423961 - AluSq SINE Alu -54 259 1 4687 108 46 42 chr2 25834321 25835097 -227421486 + MER4E LTR ERV1 1 779 0 261 0 0 0 chr2 25835650 25835679 -227420904 + (T)n Simple_repeat Simple_repeat 1 29 0 936 222 11 0 chr2 25839233 25839418 -227417165 + MER5A DNA MER1_type 3 189 0 23 33 0 0 chr2 25840834 25840864 -227415719 + GC_rich Low_complexity Low_complexity 1 30 0 194 278 37 0 chr2 25841956 25842010 -227414573 + MIR SINE MIR 18 73 -135 183 205 0 0 chr2 25845150 25845189 -227411394 + (TG)n Simple_repeat Simple_repeat 2 40 0 2019 153 14 0 chr2 25845346 25845640 -227410943 - AluJo SINE Alu -14 298 1 370 207 155 9 chr2 25846244 25846360 -227410223 - L2 LINE L2 -19 3294 3162 391 247 124 67 chr2 25846417 25846485 -227410098 + MIR SINE MIR 2 65 -197 2462 94 0 0 chr2 25846485 25846794 -227409789 - AluSx SINE Alu -3 309 1 391 247 124 67 chr2 25846794 25846919 -227409664 + MIR SINE MIR 65 206 -56 2312 96 6 16 chr2 25847170 25847484 -227409099 - AluSq SINE Alu -2 311 1 1087 325 59 28 chr2 25848173 25848831 -227407752 + L3 LINE CR1 809 1554 -23 2342 111 7 0 chr2 25848832 25849139 -227407444 - AluSx SINE Alu 0 312 4 402 303 71 13 chr2 25849548 25849703 -227406880 + MIR3 SINE MIR 40 203 -5 249 33 0 0 chr2 25852766 25852796 -227403787 + (TG)n Simple_repeat Simple_repeat 2 31 0 2025 132 3 3 chr2 25852819 25853108 -227403475 - AluSx SINE Alu -23 289 1 217 244 171 40 chr2 25853110 25853240 -227403343 - MIR SINE MIR -65 143 17 384 22 0 0 chr2 25853806 25853851 -227402732 + (TG)n Simple_repeat Simple_repeat 2 46 0 233 167 67 0 chr2 25854257 25854317 -227402266 + L1M4 LINE L1 4987 5050 -1096 2112 137 3 13 chr2 25854393 25854708 -227401875 - AluSx SINE Alu 0 312 1 1625 180 35 14 chr2 25854742 25854857 -227401726 + L1M4 LINE L1 4973 5084 -1090 2549 67 0 0 chr2 25854857 25855157 -227401426 - AluY SINE Alu -11 300 1 1625 180 35 14 chr2 25855157 25855620 -227400963 + L1M4 LINE L1 5084 5557 -617 * 11348 178 19 4 chr2 25855618 25856088 -227400495 + L1PB1 LINE L1 2722 3183 -2968 2264 91 0 3 chr2 25856088 25856374 -227400209 + AluSx SINE Alu 1 285 -27 300 53 0 0 chr2 25856374 25856412 -227400171 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 11348 178 19 4 chr2 25856412 25857603 -227398980 + L1PB1 LINE L1 3183 4354 -1797 234 0 0 0 chr2 25857603 25857629 -227398954 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 11348 178 19 4 chr2 25857629 25859348 -227397235 + L1PB1 LINE L1 4354 6151 0 342 208 17 17 chr2 25859379 25859557 -227397026 + (TA)n Simple_repeat Simple_repeat 2 179 0 2071 75 4 0 chr2 25859942 25860209 -227396374 + L1PB1 LINE L1 5706 5973 -178 2022 131 0 3 chr2 25860209 25860499 -227396084 + AluSx SINE Alu 21 309 -3 1076 154 0 0 chr2 25860499 25860661 -227395922 + AluSg/x SINE Alu 134 295 -17 258 81 0 0 chr2 25861277 25861314 -227395269 + (CA)n Simple_repeat Simple_repeat 1 37 0 2528 59 0 7 chr2 25861346 25861652 -227394931 - AluY SINE Alu -7 304 1 681 275 165 43 chr2 25861905 25862138 -227394445 + L2 LINE L2 2243 2446 -826 2278 108 0 3 chr2 25862138 25862443 -227394140 - AluSx SINE Alu -8 304 1 681 275 165 43 chr2 25862443 25862644 -227393939 + L2 LINE L2 2446 2621 -651 1061 54 78 0 chr2 25862644 25862773 -227393810 + MER85 DNA T2_type 1 139 0 681 275 165 43 chr2 25862773 25862796 -227393787 + L2 LINE L2 2621 2640 -632 1914 166 0 0 chr2 25862796 25863097 -227393486 + AluJb SINE Alu 3 303 -9 681 275 165 43 chr2 25863097 25863363 -227393220 + L2 LINE L2 2640 3068 -204 603 140 21 0 chr2 25863367 25863460 -227393123 - AluJ SINE Alu -7 305 211 871 99 20 80 chr2 25863460 25863611 -227392972 - AluJ SINE Alu -170 142 1 338 242 110 60 chr2 25863622 25863804 -227392779 + L2 LINE L2 3089 3279 -34 202 240 308 0 chr2 25863830 25863934 -227392649 - MIR SINE MIR -4 258 123 191 250 163 0 chr2 25864163 25864255 -227392328 + MIR3 SINE MIR 4 110 -98 329 245 176 32 chr2 25864550 25864738 -227391845 + L2 LINE L2 3033 3247 -66 1844 152 14 0 chr2 25865001 25865297 -227391286 - AluJb SINE Alu -12 300 1 358 264 132 16 chr2 25865362 25865491 -227391092 - MIR SINE MIR -25 237 94 436 189 91 118 chr2 25865716 25865970 -227390613 - L1ME4a LINE L1 -58 6063 5817 908 202 13 70 chr2 25865979 25866207 -227390376 - AluJo SINE Alu -15 297 83 2395 95 0 0 chr2 25866219 25866524 -227390059 - AluSq SINE Alu -8 305 1 284 241 23 23 chr2 25866524 25866611 -227389972 - L1ME4a LINE L1 -292 5829 5743 1088 135 0 27 chr2 25866646 25866831 -227389752 - AluJb SINE Alu -1 311 132 1502 66 6 0 chr2 25866851 25867034 -227389549 + AluSp SINE Alu 1 184 -129 458 244 157 46 chr2 25867193 25867403 -227389180 - L2 LINE L2 -244 3069 2884 1416 93 132 10 chr2 25867403 25867497 -227389086 + MER30 DNA MER1_type 1 82 -148 198 71 0 0 chr2 25867497 25867525 -227389058 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 1416 93 132 10 chr2 25867525 25867635 -227388948 + MER30 DNA MER1_type 82 230 0 458 244 157 46 chr2 25867635 25867756 -227388827 - L2 LINE L2 -429 2884 2698 455 209 0 0 chr2 25867763 25867854 -227388729 + L1MC3 LINE L1 7005 7095 -690 274 233 14 14 chr2 25867857 25867930 -227388653 + MLT1F1 LTR MaLR 36 108 -459 2323 129 73 5 chr2 25867930 25868326 -227388257 + L1MC3 LINE L1 7172 7594 -191 906 145 25 60 chr2 25868326 25868431 -227388152 + L1MC2 LINE L1 6137 6233 -111 1863 123 7 11 chr2 25868431 25868708 -227387875 + AluJb SINE Alu 11 286 -26 906 145 25 60 chr2 25868708 25868802 -227387781 + L1MC2 LINE L1 6233 6329 -15 209 333 0 0 chr2 25868808 25868880 -227387703 - L2 LINE L2 -615 2699 2628 * 337 262 170 2 chr2 25868845 25869022 -227387561 + MIR SINE MIR 16 222 -40 263 229 100 43 chr2 25869890 25870030 -227386553 - L1MC5 LINE L1 -53 7908 7761 697 260 18 18 chr2 25871553 25871722 -227384861 + MER5B DNA MER1_type 1 169 -9 392 350 85 5 chr2 25871958 25872158 -227384425 + MIR SINE MIR 47 262 0 377 288 31 50 chr2 25872893 25873072 -227383511 - MER5A DNA MER1_type 0 189 2 2355 81 0 19 chr2 25873449 25873758 -227382825 + AluSx SINE Alu 1 303 -9 223 278 158 62 chr2 25874776 25874985 -227381598 + L2 LINE L2 2809 3037 -235 469 269 60 81 chr2 25875052 25875262 -227381321 + MIR SINE MIR 34 260 -2 1821 139 3 70 chr2 25875442 25875758 -227380825 - AluJo SINE Alu -17 295 1 934 265 84 31 chr2 25875800 25876410 -227380173 - L1MEd LINE L1 -4723 1406 763 659 307 105 43 chr2 25876423 25876702 -227379881 - L1MEd LINE L1 -5427 692 381 2348 91 0 16 chr2 25876702 25877011 -227379572 - AluSx SINE Alu -8 304 1 659 307 105 43 chr2 25877011 25877122 -227379461 - L1MEd LINE L1 -5738 381 278 405 279 34 131 chr2 25877246 25877483 -227379100 + L2 LINE L2 2994 3207 -65 2587 50 0 7 chr2 25877597 25877897 -227378686 + AluY SINE Alu 4 301 -10 4637 210 83 20 chr2 25877913 25878778 -227377805 - L1ME2 LINE L1 -67 6097 5288 1966 97 8 0 chr2 25878778 25879036 -227377547 - AluY SINE Alu -4 307 48 4637 210 83 20 chr2 25879036 25879830 -227376753 - L1ME2 LINE L1 -876 5288 4278 1802 138 0 11 chr2 25879830 25880105 -227376478 - AluJb SINE Alu -17 295 24 4637 210 83 20 chr2 25880105 25880439 -227376144 - L1ME2 LINE L1 -1886 4278 3967 22 35 0 0 chr2 25882056 25882085 -227374498 + AT_rich Low_complexity Low_complexity 1 29 0 2335 97 0 10 chr2 25882887 25883196 -227373387 + AluY SINE Alu 1 306 -5 22 0 0 0 chr2 25884606 25884628 -227371955 + AT_rich Low_complexity Low_complexity 1 22 0 390 262 99 73 chr2 25885145 25885557 -227371026 - L1MC5 LINE L1 -27 7934 7512 2267 98 19 3 chr2 25885582 25885889 -227370694 - AluSx SINE Alu 0 312 1 1061 245 30 30 chr2 25885906 25886024 -227370559 - L1MC4a LINE L1 -898 6910 6793 2407 98 0 0 chr2 25886024 25886331 -227370252 - AluSx SINE Alu -5 307 1 1061 245 30 30 chr2 25886331 25886514 -227370069 - L1MC4a LINE L1 -1014 6794 6609 3574 107 11 52 chr2 25886593 25886868 -227369715 + MER75 DNA T2_type 2 246 -268 2254 98 0 3 chr2 25886868 25887154 -227369429 - AluSc SINE Alu -24 285 1 3574 107 11 52 chr2 25887154 25887413 -227369170 + MER75 DNA T2_type 246 514 0 1420 154 0 26 chr2 25887501 25887657 -227368926 - AluJb SINE Alu -23 289 131 225 0 0 0 chr2 25887657 25887682 -227368901 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2282 78 0 3 chr2 25887682 25887966 -227368617 - AluY SINE Alu -28 283 1 1420 154 0 26 chr2 25887966 25888041 -227368542 - AluJb SINE Alu -179 133 63 541 233 204 61 chr2 25888047 25888440 -227368143 - L1MDa LINE L1 -4785 1755 1320 2587 310 68 24 chr2 25888440 25888508 -227368075 - L2 LINE L2 -513 2801 2737 2296 117 0 0 chr2 25888508 25888815 -227367768 - AluSx SINE Alu -5 307 1 2587 310 68 24 chr2 25888815 25888847 -227367736 - L2 LINE L2 -577 2737 2708 907 110 0 16 chr2 25888847 25888974 -227367609 + FLAM_C SINE Alu 1 125 -8 2587 310 68 24 chr2 25888974 25889916 -227366667 - L2 LINE L2 -606 2708 1712 2219 107 0 19 chr2 25889917 25890225 -227366358 - AluSx SINE Alu -10 302 1 213 143 71 0 chr2 25890443 25890485 -227366098 + (CATATA)n Simple_repeat Simple_repeat 2 46 0 209 249 121 91 chr2 25890667 25890832 -227365751 - L2 LINE L2 -23 3290 3121 289 291 27 27 chr2 25891114 25891224 -227365359 - MER5A DNA MER1_type -72 117 8 325 184 154 110 chr2 25891510 25891646 -227364937 + MIR SINE MIR 91 232 -30 2702 17 0 0 chr2 25891730 25892024 -227364559 - AluYa5 SINE Alu -17 294 1 1103 271 91 33 chr2 25892053 25892506 -227364077 + L2 LINE L2 2220 2698 -616 876 154 0 7 chr2 25892511 25892654 -227363929 + L1MB8 LINE L1 6037 6178 0 2449 174 191 104 chr2 25892673 25892919 -227363664 + L1MC3 LINE L1 6137 6360 -657 2000 116 3 29 chr2 25892919 25893230 -227363353 - AluSx SINE Alu -9 303 1 2449 174 191 104 chr2 25893230 25893574 -227363009 + L1MC3 LINE L1 6360 6672 -345 264 284 39 59 chr2 25893574 25893676 -227362907 + MLT1F1 LTR MaLR 35 134 -433 2449 174 191 104 chr2 25893676 25894115 -227362468 + L1MC3 LINE L1 6672 6925 -92 2491 73 0 6 chr2 25894115 25894428 -227362155 + AluY SINE Alu 1 311 0 2449 174 191 104 chr2 25894428 25894530 -227362053 + L1MC3 LINE L1 6925 7017 0 1336 302 70 16 chr2 25894546 25895030 -227361553 + L2 LINE L2 2804 3313 0 2169 111 10 10 chr2 25895075 25895381 -227361202 + AluSx SINE Alu 1 306 -6 224 242 76 30 chr2 25895415 25895481 -227361102 - MIR SINE MIR -173 89 21 180 353 130 55 chr2 25896155 25896501 -227360082 - L2 LINE L2 -92 3180 2809 544 187 97 58 chr2 25896558 25896618 -227359965 - MER3 DNA MER1_type -17 192 136 2092 133 0 7 chr2 25896618 25896919 -227359664 + AluSq SINE Alu 1 299 -14 544 187 97 58 chr2 25896919 25897013 -227359570 - MER3 DNA MER1_type -73 136 32 254 308 42 50 chr2 25897038 25897158 -227359425 - L2 LINE L2 -560 2754 2636 255 265 15 0 chr2 25897869 25897937 -227358646 + L2 LINE L2 2323 2391 -923 16494 119 21 14 chr2 25898665 25900087 -227356496 + Tigger1 DNA MER2_type 1 1450 -968 2173 107 20 3 chr2 25900087 25900385 -227356198 - AluSq SINE Alu -10 303 1 16494 119 21 14 chr2 25900385 25901362 -227355221 + Tigger1 DNA MER2_type 1450 2418 0 643 237 28 47 chr2 25901889 25902100 -227354483 - HAL1 LINE L1 -2256 251 45 961 122 7 0 chr2 25902541 25902680 -227353903 - FAM SINE Alu -5 44 1 461 231 113 19 chr2 25905057 25905138 -227351445 - MIR SINE MIR -67 195 123 2002 128 3 32 chr2 25905138 25905450 -227351133 + AluSx SINE Alu 1 303 -9 461 231 113 19 chr2 25905450 25905528 -227351055 - MIR SINE MIR -139 123 21 323 276 84 34 chr2 25905748 25905911 -227350672 - MER5A DNA MER1_type -8 181 1 1340 109 63 225 chr2 25907855 25908269 -227348314 + MER7A DNA MER2_type 1 345 -1 32 0 0 0 chr2 25909181 25909213 -227347370 + AT_rich Low_complexity Low_complexity 1 32 0 821 155 9 0 chr2 25909213 25909329 -227347254 - FLAM_C SINE Alu -25 118 2 1199 119 4 132 chr2 25909803 25909864 -227346719 + AluJo SINE Alu 88 155 -157 2265 99 0 0 chr2 25909864 25910184 -227346399 + AluSg SINE Alu 1 320 0 1199 119 4 132 chr2 25910184 25910198 -227346385 + AluJo SINE Alu 155 169 -143 1784 164 3 10 chr2 25910198 25910502 -227346081 + AluJo SINE Alu 1 302 -10 1199 119 4 132 chr2 25910502 25910667 -227345916 + AluJo SINE Alu 169 299 -13 1144 217 68 32 chr2 25911262 25911571 -227345012 - MER2 DNA MER2_type -25 320 1 253 241 111 46 chr2 25912014 25912122 -227344461 - MER5A DNA MER1_type -6 183 69 293 306 51 88 chr2 25912163 25912617 -227343966 - L2 LINE L2 -653 2661 2225 2114 114 7 7 chr2 25912670 25912967 -227343616 - AluSx SINE Alu -15 297 1 274 194 113 0 chr2 25913313 25913375 -227343208 - L2 LINE L2 -1 3312 3244 723 221 0 8 chr2 25913553 25913684 -227342899 + FLAM_A SINE Alu 1 130 -3 337 242 39 39 chr2 25913878 25914006 -227342577 + L1 LINE L1 5265 5392 -754 1883 167 0 0 chr2 25914010 25914292 -227342291 + AluJo SINE Alu 1 282 -30 960 267 12 18 chr2 25914416 25914749 -227341834 + L1ME4a LINE L1 5538 5868 -253 234 330 55 0 chr2 25914777 25914868 -227341715 - MIR SINE MIR -1 261 166 363 23 0 0 chr2 25915154 25915198 -227341385 + (CA)n Simple_repeat Simple_repeat 1 44 0 198 208 0 0 chr2 25915198 25915246 -227341337 + GA-rich Low_complexity Low_complexity 3 50 0 314 308 164 0 chr2 25915396 25915500 -227341083 + L2 LINE L2 3141 3261 -11 826 220 62 50 chr2 25915803 25916062 -227340521 - MIR SINE MIR 0 262 1 1565 165 61 11 chr2 25916610 25916889 -227339694 + AluJb SINE Alu 1 293 -19 216 310 90 10 chr2 25917743 25917843 -227338740 - L2 LINE L2 -12 3260 3153 200 340 174 0 chr2 25918132 25918276 -227338307 - MIR SINE MIR -10 252 84 1945 154 3 3 chr2 25919097 25919396 -227337187 - AluJb SINE Alu -13 299 1 2276 110 3 0 chr2 25920592 25920891 -227335692 + AluSx SINE Alu 1 300 -12 570 203 23 30 chr2 25922724 25922857 -227333726 - AluSg1 SINE Alu -176 133 2 1089 148 0 23 chr2 25923865 25924041 -227332542 - AluJo/FRAM SINE Alu -7 305 134 1836 142 35 10 chr2 25924041 25924329 -227332254 - AluSx SINE Alu -16 296 2 278 218 79 74 chr2 25924374 25924561 -227332022 + L1MDa LINE L1 1543 1726 -4814 1728 182 7 3 chr2 25924561 25924890 -227331693 + AluJb SINE Alu 1 312 0 278 218 79 74 chr2 25924890 25924926 -227331657 + L1MDa LINE L1 1726 1760 -4780 884 159 34 193 chr2 25925062 25925108 -227331475 + L1M4 LINE L1 4136 4188 -1958 1856 142 3 60 chr2 25925108 25925259 -227331324 + AluJb SINE Alu 1 124 -188 2176 109 13 10 chr2 25925259 25925562 -227331021 + AluY SINE Alu 1 304 -7 1856 142 3 60 chr2 25925562 25925741 -227330842 + AluJb SINE Alu 124 312 0 884 159 34 193 chr2 25925741 25925865 -227330718 + L1M4 LINE L1 4188 4330 -1816 1731 170 7 17 chr2 25925865 25926159 -227330424 + AluJo SINE Alu 1 291 -21 884 159 34 193 chr2 25926159 25926290 -227330293 + L1M4 LINE L1 4330 4377 -1769 2444 69 0 10 chr2 25926290 25926594 -227329989 + AluY SINE Alu 1 301 -10 884 159 34 193 chr2 25926594 25926642 -227329941 + L1M4 LINE L1 4377 4431 -1715 1966 136 0 0 chr2 25926643 25926916 -227329667 + AluSx SINE Alu 1 273 -39 229 182 0 0 chr2 25926916 25926960 -227329623 + GA-rich Low_complexity Low_complexity 1 44 0 966 138 6 11 chr2 25926960 25927141 -227329442 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 572 138 13 38 chr2 25927147 25927306 -227329277 + GA-rich Low_complexity Low_complexity 2 156 0 1065 208 80 13 chr2 25927311 25927624 -227328959 + L1M4 LINE L1 4416 4749 -1397 2568 118 66 9 chr2 25928586 25929011 -227327572 + L1MA4A LINE L1 5762 6210 -93 1921 105 19 0 chr2 25929020 25929277 -227327306 - L1PA12 LINE L1 0 6168 5907 658 106 0 0 chr2 25929277 25929371 -227327212 + L1MA4A LINE L1 6204 6297 -6 264 236 42 0 chr2 25929757 25929829 -227326754 + L2 LINE L2 2196 2270 -1044 1350 270 163 22 chr2 25929976 25930928 -227325655 + L2 LINE L2 2229 3311 -2 525 184 48 24 chr2 25930968 25931093 -227325490 + MER97a DNA MER1_type? 767 894 0 320 197 0 0 chr2 25931093 25931154 -227325429 - L1M4 LINE L1 -1609 4537 4477 2304 103 3 0 chr2 25931192 25931494 -227325089 - AluSp SINE Alu -10 303 1 2186 219 30 16 chr2 25931498 25932059 -227324524 - L1M4 LINE L1 -1661 4485 3917 509 302 80 24 chr2 25932063 25932401 -227324182 - L1MEc LINE L1 -4653 1743 1387 2287 120 0 3 chr2 25932404 25932712 -227323871 - AluSx SINE Alu -5 307 1 545 297 114 67 chr2 25932850 25933165 -227323418 - L1MEc LINE L1 -5138 1067 719 2398 95 0 3 chr2 25933165 25933470 -227323113 - AluSx SINE Alu -8 304 1 545 297 114 67 chr2 25933470 25933645 -227322938 - L1MEc LINE L1 -5486 719 554 2245 98 3 0 chr2 25934003 25934290 -227322293 - AluSq SINE Alu -21 292 5 239 406 30 0 chr2 25935536 25935669 -227320914 - L2 LINE L2 -461 2853 2717 2039 122 6 34 chr2 25936103 25936424 -227320159 + AluSx SINE Alu 1 312 0 234 311 111 0 chr2 25936547 25936637 -227319946 - L2 LINE L2 -2 3311 3212 1093 321 45 3 chr2 25936663 25937142 -227319441 - L2 LINE L2 -77 3236 2740 2022 106 20 17 chr2 25937345 25937646 -227318937 - AluSx SINE Alu -10 302 1 1460 190 97 15 chr2 25937892 25938234 -227318349 + L1MD3 LINE L1 4568 4937 -1209 2059 85 44 4 chr2 25938236 25938540 -227318043 - AluSq SINE Alu 0 315 1 1249 215 13 16 chr2 25938550 25938910 -227317673 + L1MD3 LINE L1 5267 7993 -2 1158 157 0 30 chr2 25938910 25939107 -227317476 - AluJb SINE Alu -12 300 110 2283 106 0 3 chr2 25939232 25939534 -227317049 + AluSq SINE Alu 1 301 -12 2244 210 61 9 chr2 25939534 25940078 -227316505 + L1ME1 LINE L1 5595 6166 0 * 3457 141 63 91 chr2 25940069 25940850 -227315733 + L1MB2 LINE L1 5413 6171 0 294 148 0 0 chr2 25941201 25941255 -227315328 + (CA)n Simple_repeat Simple_repeat 2 55 0 1721 173 3 7 chr2 25941706 25941989 -227314594 + AluJo SINE Alu 1 282 -30 192 97 0 0 chr2 25941992 25942023 -227314560 + (T)n Simple_repeat Simple_repeat 1 31 0 1391 137 48 9 chr2 25942139 25942366 -227314217 - MER46A DNA MER2_type 0 236 1 1917 108 37 0 chr2 25942726 25943015 -227313568 + AluSg SINE Alu 1 299 0 1304 201 112 29 chr2 25943857 25944011 -227312572 - MER58B DNA MER1_type -2079 341 201 1624 154 50 40 chr2 25944011 25944310 -227312273 - AluSx SINE Alu -10 302 1 1304 201 112 29 chr2 25944310 25944469 -227312114 - MER58B DNA MER1_type -2219 201 2 428 276 78 0 chr2 25945058 25945174 -227311409 - L2 LINE L2 0 3313 3189 186 236 90 22 chr2 25945235 25945324 -227311259 - MIR SINE MIR -50 212 118 2332 110 0 0 chr2 25945326 25945625 -227310958 - AluSx SINE Alu -13 299 1 222 206 191 0 chr2 25945880 25945943 -227310640 + L2 LINE L2 3198 3272 0 2123 132 0 3 chr2 25945982 25946286 -227310297 + AluSx SINE Alu 1 303 -9 232 287 54 100 chr2 25946403 25946522 -227310061 - MER5B DNA MER1_type 0 189 63 2447 82 3 0 chr2 25946522 25946825 -227309758 - AluSp SINE Alu -9 304 1 232 287 54 100 chr2 25946825 25946881 -227309702 - MER5B DNA MER1_type -126 63 6 240 224 20 0 chr2 25946920 25946969 -227309614 - L3 LINE CR1 -8 1569 1520 340 301 32 38 chr2 25947354 25947534 -227309049 + MLT1J2 LTR MaLR 263 401 -8 339 226 104 0 chr2 25947595 25947701 -227308882 + L1ME LINE L1 5688 5804 -366 2198 99 31 0 chr2 25947985 25948279 -227308304 + AluSq SINE Alu 1 303 -10 428 296 48 77 chr2 25948469 25948821 -227307762 + HAL1 LINE L1 294 635 -1872 375 41 0 0 chr2 25948970 25949019 -227307564 + (TA)n Simple_repeat Simple_repeat 1 49 0 2205 120 0 7 chr2 25949019 25949318 -227307265 - AluSq SINE Alu -16 297 1 2768 259 66 83 chr2 25949530 25949866 -227306717 + L1M4 LINE L1 2742 3082 -3064 2241 100 7 3 chr2 25949866 25950165 -227306418 + AluSc SINE Alu 3 302 -7 2768 259 66 83 chr2 25950165 25951318 -227305265 + L1M4 LINE L1 3082 4370 -1776 311 216 14 0 chr2 25951318 25951392 -227305191 + L1MB7 LINE L1 6099 6173 -11 2768 259 66 83 chr2 25951392 25952144 -227304439 + L1M4 LINE L1 4370 5134 -1012 295 287 96 22 chr2 25952475 25952611 -227303972 + HAL1b LINE L1 746 891 -457 28 0 0 0 chr2 25952634 25952662 -227303921 + AT_rich Low_complexity Low_complexity 1 28 0 1963 135 3 7 chr2 25952779 25953068 -227303515 + AluJb SINE Alu 1 288 -24 333 279 184 5 chr2 25953079 25953269 -227303314 + HAL1 LINE L1 2283 2506 -1 2122 138 7 0 chr2 25954589 25954894 -227301689 + AluSp SINE Alu 1 307 -6 1753 164 3 13 chr2 25955666 25955970 -227300613 + AluJb SINE Alu 1 301 -11 208 239 45 45 chr2 25956137 25956204 -227300379 + L2 LINE L2 2714 2780 -534 5808 107 35 36 chr2 25956722 25957678 -227298905 - SVA Other Other 0 1386 432 4831 111 45 29 chr2 25957710 25959491 -227297092 - SVA Other Other -518 868 1 2069 87 0 0 chr2 25959505 25959769 -227296814 - AluSc SINE Alu -45 264 1 1719 150 3 72 chr2 25960829 25961136 -227295447 + AluJo SINE Alu 1 286 -26 2166 110 3 0 chr2 25961184 25961474 -227295109 - AluSq SINE Alu -18 295 5 233 227 72 0 chr2 25961730 25961807 -227294776 - L1ME LINE L1 -263 5886 5808 261 0 8 0 chr2 25961826 25961894 -227294689 + (T)n Simple_repeat Simple_repeat 1 29 0 1422 252 103 32 chr2 25961933 25963216 -227293367 - L1ME LINE L1 -371 5782 4388 267 164 0 18 chr2 25963248 25963303 -227293280 - L1MB2 LINE L1 0 6171 6118 180 0 0 0 chr2 25963303 25963323 -227293260 + (TTA)n Simple_repeat Simple_repeat 2 21 0 298 118 59 0 chr2 25963323 25963374 -227293209 - AluJ/FRAM SINE Alu -17 285 232 4523 27 8 0 chr2 25963392 25963881 -227292702 + SVA Other Other 891 1383 -3 2241 103 6 10 chr2 25964026 25964338 -227292245 + AluSx SINE Alu 1 311 -1 438 201 86 72 chr2 25964353 25964492 -227292091 - L1MB2 LINE L1 -61 6110 5970 * 1457 184 4 0 chr2 25964486 25964730 -227291853 - L1MB2 LINE L1 -413 5758 5514 335 318 71 24 chr2 25964738 25964908 -227291675 - L1ME LINE L1 -2020 4109 3932 860 114 0 0 chr2 25964944 25965067 -227291516 - AluSg/x SINE Alu -12 298 176 815 280 78 33 chr2 25965080 25965622 -227290961 - L1ME LINE L1 -2204 3925 3360 375 248 50 19 chr2 25965956 25966117 -227290466 - L1ME LINE L1 -3762 2367 2202 2353 97 7 0 chr2 25966123 25966433 -227290150 - AluSx SINE Alu 0 312 1 24 0 0 0 chr2 25967681 25967705 -227288878 + AT_rich Low_complexity Low_complexity 1 24 0 325 312 69 6 chr2 25967792 25967979 -227288604 - L1MDa LINE L1 -762 2139 1852 * 505 243 61 42 chr2 25967959 25968173 -227288410 - L1MDa LINE L1 -5007 1523 1306 603 219 0 34 chr2 25968459 25968587 -227287996 + MER3 DNA MER1_type 1 125 -37 2107 108 35 0 chr2 25968587 25968875 -227287708 - AluSx SINE Alu -14 298 1 603 219 0 34 chr2 25968875 25968892 -227287691 + MER3 DNA MER1_type 125 141 -68 1948 179 66 34 chr2 25968895 25969335 -227287248 + MER101 LTR ERV1 11 464 -10 318 345 74 5 chr2 25969350 25969553 -227287030 - L1MDa LINE L1 -5664 866 650 1649 204 0 10 chr2 25969794 25970102 -227286481 - AluJo SINE Alu -7 305 1 696 268 111 90 chr2 25970122 25970268 -227286315 - L1 LINE L1 -2307 3839 3697 1923 114 7 4 chr2 25970268 25970541 -227286042 - AluSq SINE Alu -2 311 38 696 268 111 90 chr2 25970541 25971424 -227285159 - L1 LINE L1 -2449 3697 2789 1188 261 52 17 chr2 25971433 25971827 -227284756 - L2 LINE L2 -294 3019 2611 28 48 0 0 chr2 25972005 25972047 -227284536 + AT_rich Low_complexity Low_complexity 1 42 0 204 242 15 0 chr2 25972158 25972224 -227284359 + (TA)n Simple_repeat Simple_repeat 1 67 0 1820 129 0 0 chr2 25972667 25972915 -227283668 - AluJb SINE Alu -64 248 1 1924 123 0 0 chr2 25973383 25973643 -227282940 - AluSx SINE Alu -52 260 1 499 296 64 20 chr2 25973654 25973904 -227282679 - L1ME LINE L1 -4943 1176 916 403 337 111 23 chr2 25974465 25974726 -227281857 - L1MEd LINE L1 -4946 1173 890 24 32 0 0 chr2 25975494 25975525 -227281058 + AT_rich Low_complexity Low_complexity 1 31 0 2556 7 0 0 chr2 25975538 25975812 -227280771 - AluYb8 SINE Alu -5 313 40 748 130 0 0 chr2 25975819 25975919 -227280664 - FLAM_A SINE Alu -18 124 25 2288 71 7 19 chr2 25976206 25976514 -227280069 + AluSq SINE Alu 1 304 -9 713 271 148 16 chr2 25977206 25977572 -227279011 + L1ME2 LINE L1 5524 5940 -224 2373 83 17 0 chr2 25977766 25978067 -227278516 + AluY SINE Alu 1 306 -5 257 214 36 0 chr2 25978364 25978420 -227278163 - L1ME4a LINE L1 -195 5926 5869 2167 131 0 13 chr2 25978485 25978799 -227277784 + AluSx SINE Alu 1 310 -2 364 309 81 94 chr2 25978810 25979182 -227277401 - L1MC4a LINE L1 -1976 5832 5466 2246 93 3 17 chr2 25980025 25980325 -227276258 - AluSc SINE Alu -9 300 5 280 304 5 22 chr2 25980495 25980586 -227275997 + MIR SINE MIR 59 149 -73 689 236 18 12 chr2 25980589 25980754 -227275829 + Charlie1 DNA MER1_type 2 167 -2594 2229 156 44 11 chr2 25980757 25981067 -227275516 + Charlie1 DNA MER1_type 2312 2641 -120 2151 114 10 0 chr2 25981067 25981364 -227275219 - AluSx SINE Alu -12 300 1 2229 156 44 11 chr2 25981364 25981488 -227275095 + Charlie1 DNA MER1_type 2641 2760 -1 2372 93 3 13 chr2 25982736 25983047 -227273536 + AluSx SINE Alu 1 308 -4 191 237 155 31 chr2 25983049 25983146 -227273437 - L2 LINE L2 0 3313 3205 864 204 19 0 chr2 25983371 25983533 -227273050 + L1MC/D LINE L1 5398 5562 -2246 2611 208 52 81 chr2 25984353 25984877 -227271706 - HsTC2c DNA MER2_type -1169 729 232 2300 92 3 0 chr2 25984877 25985170 -227271413 - AluSc SINE Alu -15 294 1 2611 208 52 81 chr2 25985170 25985394 -227271189 - HsTC2c DNA MER2_type -1666 232 3 180 322 23 46 chr2 25985423 25985510 -227271073 + L3b LINE CR1 1410 1494 -89 208 252 59 74 chr2 25986228 25986363 -227270220 - MER5B DNA MER1_type -45 133 1 1302 261 195 46 chr2 25987622 25988253 -227268330 + L2 LINE L2 1 725 -2589 732 214 112 96 chr2 25988253 25988576 -227268007 + MLT1D LTR MaLR 2 329 -176 2150 109 20 13 chr2 25988605 25988909 -227267674 + AluSx SINE Alu 1 306 -6 1665 244 54 46 chr2 25988909 25989413 -227267170 + MLT2B1 LTR ERVL 13 520 0 342 314 114 7 chr2 25989413 25989553 -227267030 + MLT1D LTR MaLR 313 467 0 1024 272 107 33 chr2 25989572 25990058 -227266525 + L2 LINE L2 733 1254 -2060 328 258 0 0 chr2 25990047 25990113 -227266470 + L2 LINE L2 3005 3070 -243 * 2582 148 29 5 chr2 25990135 25990546 -227266037 + MSTB LTR MaLR 1 421 -5 4420 163 28 37 chr2 25990547 25991404 -227265179 - L1MB7 LINE L1 -19 6165 5317 1995 145 10 0 chr2 25991416 25991712 -227264871 - AluSx SINE Alu -13 299 1 945 128 122 17 chr2 25991729 25991909 -227264674 - L1MB2 LINE L1 -12 6159 5961 6325 199 42 41 chr2 25991911 25992524 -227264059 - L1MB7 LINE L1 -814 5332 4721 2128 73 0 38 chr2 25992524 25992811 -227263772 - AluY SINE Alu -3 308 33 6325 199 42 41 chr2 25992811 25993017 -227263566 - L1MB7 LINE L1 -1425 4721 4517 2149 128 0 22 chr2 25993017 25993330 -227263253 - AluSx SINE Alu -6 306 1 6325 199 42 41 chr2 25993330 25993509 -227263074 - L1MB7 LINE L1 -1629 4517 4340 595 90 13 0 chr2 25993509 25993587 -227262996 - MADE1 DNA Mariner -1 79 1 6325 199 42 41 chr2 25993587 25993882 -227262701 - L1MB7 LINE L1 -1806 4340 4047 1565 149 17 61 chr2 25993882 25994178 -227262405 - AluJb SINE Alu -18 294 12 6325 199 42 41 chr2 25994178 25994468 -227262115 - L1MB7 LINE L1 -2099 4047 3744 1078 230 201 94 chr2 25994559 25995146 -227261437 + MLT1E3 LTR MaLR 5 624 0 601 238 32 0 chr2 25995146 25995272 -227261311 - MER94 DNA DNA -4 130 1 386 350 38 0 chr2 25995356 25995516 -227261067 - L2 LINE L2 -2881 433 268 237 171 118 53 chr2 25995658 25995734 -227260849 - MER4D LTR ERV1 -68 804 724 2368 94 3 0 chr2 25996523 25996831 -227259752 + AluSc SINE Alu 1 309 0 1115 92 0 13 chr2 25996838 25996991 -227259592 + L1MB3 LINE L1 6028 6178 -5 814 255 109 39 chr2 25997379 25997952 -227258631 + MLT1G LTR MaLR 22 590 0 2361 82 7 0 chr2 25998460 25998764 -227257819 + AluSq SINE Alu 1 306 -7 1609 171 40 20 chr2 25998775 25999079 -227257504 + AluJb SINE Alu 1 310 -2 1898 206 122 36 chr2 25999113 25999646 -227256937 + L2 LINE L2 1775 2353 -961 2502 60 0 0 chr2 26000020 26000318 -227256265 + AluY SINE Alu 1 298 -13 370 231 8 142 chr2 26000736 26000781 -227255802 + MER5B DNA MER1_type 1 50 -128 2259 74 7 23 chr2 26000781 26001080 -227255503 - AluSq SINE Alu -19 294 1 370 231 8 142 chr2 26001080 26001168 -227255415 + MER5B DNA MER1_type 50 116 -62 532 281 152 33 chr2 26001673 26002036 -227254547 - MLT1J2 LTR MaLR -44 406 1 536 232 8 8 chr2 26002038 26002163 -227254420 + L2 LINE L2 3189 3313 0 274 186 0 17 chr2 26002758 26002817 -227253766 + L1ME3A LINE L1 6113 6170 0 2596 58 0 10 chr2 26004051 26004362 -227252221 - AluY SINE Alu -3 308 1 30 0 0 0 chr2 26004676 26004706 -227251877 + AT_rich Low_complexity Low_complexity 1 30 0 198 0 0 0 chr2 26004706 26004728 -227251855 + (C)n Simple_repeat Simple_repeat 1 22 0 1848 165 0 7 chr2 26005088 26005397 -227251186 + AluSx SINE Alu 1 307 0 2408 84 10 0 chr2 26005656 26005964 -227250619 + AluSp SINE Alu 1 311 -2 1234 141 0 0 chr2 26008014 26008191 -227248392 + AluSg/x SINE Alu 120 296 -16 326 188 71 35 chr2 26008884 26008969 -227247614 + L2 LINE L2 3169 3256 -16 1995 130 42 0 chr2 26010634 26010919 -227245664 + AluSg SINE Alu 1 297 -13 2370 76 30 0 chr2 26011266 26011569 -227245014 - AluSx SINE Alu 0 312 1 7950 157 88 46 chr2 26011652 26013337 -227243246 - MER52A LTR ERV1 0 1755 1 474 243 34 20 chr2 26013634 26013676 -227242907 - L1MC5 LINE L1 -58 7903 7863 2375 101 0 0 chr2 26013676 26013983 -227242600 + AluSx SINE Alu 1 307 -5 474 243 34 20 chr2 26013983 26014088 -227242495 - L1MC5 LINE L1 -98 7863 7754 239 240 193 33 chr2 26014126 26014276 -227242307 - L1ME LINE L1 -410 5754 5581 21 82 0 0 chr2 26014472 26014521 -227242062 + AT_rich Low_complexity Low_complexity 1 49 0 408 156 21 10 chr2 26016567 26016663 -227239920 - L1MC4 LINE L1 0 8042 7946 2523 196 55 10 chr2 26016664 26017287 -227239296 - L1MC4 LINE L1 -170 7872 7222 1440 139 0 43 chr2 26019029 26019259 -227237324 + AluJb SINE Alu 85 304 -8 260 283 25 82 chr2 26019622 26019781 -227236802 - L2 LINE L2 -4 3309 3160 933 246 49 92 chr2 26019886 26020377 -227236206 + MLT1J LTR MaLR 34 503 -8 199 343 71 10 chr2 26020396 26020495 -227236088 - MIR SINE MIR -144 118 14 187 405 41 23 chr2 26020940 26021160 -227235423 - L2 LINE L2 -660 2654 2431 2357 82 7 0 chr2 26021245 26021537 -227235046 - AluY SINE Alu -17 294 1 1907 151 0 10 chr2 26021711 26022009 -227234574 + AluJo SINE Alu 1 295 -17 285 286 100 56 chr2 26022256 26022487 -227234096 + MLT1L LTR MaLR 241 583 -30 35 24 0 0 chr2 26023076 26023118 -227233465 + AT_rich Low_complexity Low_complexity 1 42 0 2280 119 0 0 chr2 26023737 26024047 -227232536 + AluSx SINE Alu 1 310 -2 28 0 0 0 chr2 26024604 26024632 -227231951 + AT_rich Low_complexity Low_complexity 1 28 0 531 244 132 12 chr2 26024744 26024994 -227231589 - L1ME4a LINE L1 -290 5831 5552 216 97 0 0 chr2 26026071 26026102 -227230481 + (CCA)n Simple_repeat Simple_repeat 1 31 0 1628 189 6 43 chr2 26026294 26026483 -227230100 - AluJo SINE Alu -1 311 137 2136 114 30 0 chr2 26026483 26026782 -227229801 - AluSx SINE Alu -4 308 1 1628 189 6 43 chr2 26026782 26026915 -227229668 - AluJo SINE Alu -175 137 1 22 35 0 0 chr2 26027728 26027757 -227228826 + AT_rich Low_complexity Low_complexity 1 29 0 271 168 99 59 chr2 26028014 26028115 -227228468 + L1MC5 LINE L1 7275 7379 -582 387 268 39 16 chr2 26028364 26028491 -227228092 + MIR SINE MIR 118 247 -15 745 296 101 56 chr2 26030697 26031123 -227225460 + LTR67 LTR ERVL 113 557 0 2248 98 14 0 chr2 26031213 26031508 -227225075 + AluSp SINE Alu 1 299 -14 459 0 0 0 chr2 26031554 26031605 -227224978 + (CA)n Simple_repeat Simple_repeat 2 52 0 572 246 32 8 chr2 26031610 26031736 -227224847 - MER5B DNA MER1_type -49 129 1 346 244 78 34 chr2 26031757 26031914 -227224669 + L1MC4a LINE L1 5288 5444 -730 1135 159 0 0 chr2 26031996 26032172 -227224411 - AluJb SINE Alu -1 311 136 1164 196 51 106 chr2 26032387 26032612 -227223971 - L1ME3A LINE L1 0 6170 5981 2228 119 0 0 chr2 26032612 26032906 -227223677 - AluSx SINE Alu -18 294 1 1164 196 51 106 chr2 26032906 26033133 -227223450 - L1ME3A LINE L1 -189 5981 5743 446 175 11 7 chr2 26033322 26033415 -227223168 + MER2 DNA MER2_type 1 89 -150 727 192 8 0 chr2 26033595 26033720 -227222863 + FLAM_A SINE Alu 2 127 -6 387 145 36 24 chr2 26033998 26034081 -227222502 + L1MC4a LINE L1 5680 5763 -2045 341 302 114 41 chr2 26034088 26034333 -227222250 + L1MC4a LINE L1 5813 6075 -1733 1561 244 55 24 chr2 26034360 26034979 -227221604 + L1M4 LINE L1 3015 3652 -2494 186 43 0 0 chr2 26035007 26035030 -227221553 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 751 179 0 0 chr2 26035030 26035147 -227221436 - AluJb SINE Alu -193 119 3 2067 96 3 3 chr2 26035149 26035440 -227221143 - L1PA16 LINE L1 -12 6154 5864 2005 257 86 19 chr2 26035440 26035578 -227221005 + L1M4 LINE L1 3639 3766 -2380 2236 117 0 0 chr2 26035578 26035886 -227220697 + AluSg SINE Alu 1 308 -2 2005 257 86 19 chr2 26035886 26036643 -227219940 + L1M4 LINE L1 3766 4594 -1552 180 0 0 0 chr2 26036665 26036685 -227219898 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 3462 194 70 15 chr2 26036685 26037467 -227219116 - MER21B LTR ERV1 -19 844 20 390 179 26 13 chr2 26037569 26037647 -227218936 - MER21B LTR ERV1 -773 90 12 189 319 0 0 chr2 26037815 26037862 -227218721 - MER5B DNA MER1_type -129 49 3 2618 55 0 0 chr2 26038551 26038862 -227217721 + AluY SINE Alu 1 311 0 1713 156 52 10 chr2 26039511 26039799 -227216784 + AluSx SINE Alu 1 300 -12 2486 80 0 0 chr2 26041660 26041962 -227214621 + AluSg SINE Alu 1 302 -8 757 167 15 0 chr2 26042586 26042718 -227213865 + AluJo SINE Alu 1 134 -178 1051 149 0 18 chr2 26042774 26042942 -227213641 + AluJo SINE Alu 131 295 -17 203 59 0 29 chr2 26043245 26043279 -227213304 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 2178 81 23 55 chr2 26043347 26043657 -227212926 - AluSp SINE Alu -13 300 1 1782 131 15 15 chr2 26044098 26044365 -227212218 + AluSx SINE Alu 1 267 -45 305 172 0 92 chr2 26044369 26044456 -227212127 - MER115 DNA AcHobo -106 587 509 539 291 34 0 chr2 26044490 26044638 -227211945 - MER115 DNA AcHobo -253 440 288 309 345 108 14 chr2 26044743 26045039 -227211544 + L1M4 LINE L1 1263 1586 -4956 354 297 34 0 chr2 26045468 26045586 -227210997 + L1MEd LINE L1 636 757 -5448 2616 124 120 22 chr2 26045753 26046245 -227210338 + MER4B LTR ERV1 1 540 -70 216 0 0 0 chr2 26047452 26047476 -227209107 + (T)n Simple_repeat Simple_repeat 1 24 0 1847 181 37 3 chr2 26047676 26048025 -227208558 + MLT1A1 LTR MaLR 1 361 -4 676 183 17 0 chr2 26048383 26048503 -227208080 + FLAM_A SINE Alu 1 122 -11 2314 92 3 7 chr2 26049031 26049334 -227207249 + AluSp SINE Alu 1 302 -11 2316 102 0 0 chr2 26049631 26049936 -227206647 - AluY SINE Alu -6 305 1 259 258 71 32 chr2 26051035 26051190 -227205393 + L1MEd LINE L1 1514 1674 -4722 363 329 95 33 chr2 26051252 26051526 -227205057 + L1MEd LINE L1 2166 2456 -3940 796 212 10 5 chr2 26051552 26051755 -227204828 + L1MB7 LINE L1 3882 4085 -2061 * 4126 160 34 34 chr2 26051751 26052457 -227204126 + L1MB7 LINE L1 5100 5809 -375 2409 80 3 19 chr2 26052457 26052768 -227203815 + AluSp SINE Alu 1 306 -7 4126 160 34 34 chr2 26052768 26053120 -227203463 + L1MB7 LINE L1 5809 6159 -25 713 265 17 80 chr2 26053152 26053207 -227203376 + L1MEd LINE L1 2454 2511 -3704 1358 206 78 27 chr2 26053207 26053503 -227203080 + AluJo SINE Alu 1 311 -1 713 265 17 80 chr2 26053503 26053813 -227202770 + L1MEd LINE L1 2511 2779 -3436 2256 112 7 0 chr2 26053813 26054118 -227202465 + AluSx SINE Alu 1 307 -5 713 265 17 80 chr2 26054118 26054276 -227202307 + L1MEd LINE L1 2779 2945 -3270 690 267 83 56 chr2 26054281 26054306 -227202277 + L1MEd LINE L1 4049 4072 -2143 2360 155 46 12 chr2 26054306 26054720 -227201863 + MSTC LTR MaLR 1 428 0 690 267 83 56 chr2 26054720 26055059 -227201524 + L1MEd LINE L1 4072 4400 -1815 261 0 0 0 chr2 26055059 26055088 -227201495 + (TCTCCC)n Simple_repeat Simple_repeat 3 31 0 8350 21 0 293 chr2 26055088 26056971 -227199612 + SVA Other Other 53 1383 -3 690 267 83 56 chr2 26056971 26057051 -227199532 + L1MEd LINE L1 4400 4476 -1739 2001 119 26 19 chr2 26057051 26057361 -227199222 + AluSx SINE Alu 1 312 0 690 267 83 56 chr2 26057361 26057524 -227199059 + L1MEd LINE L1 4476 4676 -1539 229 175 53 0 chr2 26057528 26057585 -227198998 + L1ME1 LINE L1 6106 6165 -1 477 208 15 128 chr2 26057620 26057885 -227198698 + L1MEd LINE L1 4685 4919 -1296 341 279 32 45 chr2 26058151 26058305 -227198278 + L1MEd LINE L1 4969 5120 -1095 229 141 71 71 chr2 26058424 26058509 -227198074 + MER112 DNA MER1_type 1 85 -175 301 277 65 43 chr2 26058568 26058752 -227197831 + MER112 DNA MER1_type 67 254 -6 186 311 0 151 chr2 26058875 26058929 -227197654 - MIR SINE MIR -99 109 77 7415 41 1 0 chr2 26058929 26060268 -227196315 + L1PA5 LINE L1 4812 6151 -3 186 311 0 151 chr2 26060268 26060319 -227196264 - MIR SINE MIR -131 77 20 204 182 0 0 chr2 26060432 26060476 -227196107 + (CA)n Simple_repeat Simple_repeat 2 45 0 188 284 17 97 chr2 26061305 26061481 -227195102 + MIR3 SINE MIR 20 181 -27 890 293 87 54 chr2 26061483 26062001 -227194582 + MLT1G1 LTR MaLR 1 535 -60 568 191 0 0 chr2 26062530 26062619 -227193964 + AluJ/FLAM SINE Alu 3 91 -221 2045 55 0 0 chr2 26062625 26062860 -227193723 + AluY SINE Alu 1 235 -76 189 0 0 0 chr2 26063344 26063365 -227193218 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 551 196 0 10 chr2 26063366 26063463 -227193120 - FLAM_A SINE Alu -46 96 1 2385 85 3 0 chr2 26063726 26064020 -227192563 - AluY SINE Alu -16 295 1 207 100 0 0 chr2 26064097 26064127 -227192456 + (TG)n Simple_repeat Simple_repeat 2 31 0 180 293 0 113 chr2 26064219 26064321 -227192262 + MER5A DNA MER1_type 36 121 -68 1901 158 14 3 chr2 26064321 26064612 -227191971 - AluJb SINE Alu -18 294 1 180 293 0 113 chr2 26064612 26064642 -227191941 + MER5A DNA MER1_type 121 153 -36 2336 94 3 3 chr2 26064657 26064954 -227191629 - AluSx SINE Alu -15 297 1 4066 106 9 0 chr2 26065653 26066202 -227190381 + MER41A LTR ERV1 1 554 0 1918 147 10 19 chr2 26066374 26066686 -227189897 + AluSx SINE Alu 1 309 -3 1826 137 88 0 chr2 26067001 26067285 -227189298 + AluSx SINE Alu 1 309 -3 1745 159 24 14 chr2 26067352 26067641 -227188942 - AluJb SINE Alu -20 292 1 2694 133 22 48 chr2 26067906 26068094 -227188489 + MER4B LTR ERV1 1 192 -587 2356 93 13 0 chr2 26068094 26068394 -227188189 + AluSx SINE Alu 1 304 -8 2694 133 22 48 chr2 26068394 26068816 -227187767 + MER4B LTR ERV1 192 779 0 288 273 168 54 chr2 26068914 26069494 -227187089 + L1M4 LINE L1 2214 2727 -3419 852 111 0 0 chr2 26069494 26069611 -227186972 + FLAM_C SINE Alu 2 118 -15 288 273 168 54 chr2 26069611 26069973 -227186610 + L1M4 LINE L1 2727 3263 -2883 340 25 0 0 chr2 26070384 26070424 -227186159 + L1PA16 LINE L1 6106 6145 -21 664 153 24 40 chr2 26070506 26070630 -227185953 + MER58B DNA MER1_type 218 339 -2 352 256 72 117 chr2 26070632 26070894 -227185689 + L1M4 LINE L1 3859 4131 -2015 2581 68 0 3 chr2 26070894 26071205 -227185378 - AluY SINE Alu -1 310 1 352 256 72 117 chr2 26071205 26071333 -227185250 + L1M4 LINE L1 4131 4225 -1921 1912 152 0 13 chr2 26071333 26071636 -227184947 + AluJb SINE Alu 1 299 -13 352 256 72 117 chr2 26071636 26071732 -227184851 + L1M4 LINE L1 4225 4324 -1822 433 210 43 72 chr2 26072126 26072264 -227184319 + L2 LINE L2 3161 3294 -19 222 292 75 89 chr2 26072337 26072579 -227184004 - L2 LINE L2 -354 2960 2723 2256 105 0 0 chr2 26072579 26072875 -227183708 + AluSx SINE Alu 1 296 -16 222 292 75 89 chr2 26072875 26072981 -227183602 - L2 LINE L2 -591 2723 2617 848 263 38 5 chr2 26073078 26073291 -227183292 - MIR SINE MIR -33 229 10 359 333 0 0 chr2 26073415 26073526 -227183057 - L3 LINE CR1 -11 1566 1456 2194 88 37 0 chr2 26075038 26075333 -227181250 + THE1A LTR MaLR 1 306 -49 183 156 0 0 chr2 26075333 26075365 -227181218 + A-rich Low_complexity Low_complexity 1 32 0 2328 110 13 0 chr2 26075375 26075712 -227180871 - AluSx SINE Alu 0 341 1 365 277 158 23 chr2 26075907 26076084 -227180499 - MIR SINE MIR -59 203 3 1267 163 34 0 chr2 26076184 26076393 -227180190 + MER20 DNA MER1_type 4 219 0 510 263 134 6 chr2 26076665 26076844 -227179739 + MIR SINE MIR 53 254 -8 237 289 0 0 chr2 26076982 26077027 -227179556 + LTR16C LTR ERVL 67 111 -380 1024 282 29 50 chr2 26077679 26078062 -227178521 + LTR16C LTR ERVL 103 477 -14 2126 118 3 10 chr2 26078792 26079089 -227177494 + AluSx SINE Alu 1 295 -17 4319 171 41 38 chr2 26079170 26079337 -227177246 + L1MC3 LINE L1 5107 5272 -874 1646 170 3 18 chr2 26079337 26079640 -227176943 + AluJo SINE Alu 3 301 0 4319 171 41 38 chr2 26079640 26079875 -227176708 + L1MC3 LINE L1 5272 4781 -1365 2422 101 0 0 chr2 26079875 26080182 -227176401 + AluSx SINE Alu 1 307 -5 4319 171 41 38 chr2 26080182 26080808 -227175775 + L1MC3 LINE L1 4780 5403 -743 733 164 16 8 chr2 26080830 26080958 -227175625 - AluJo SINE Alu -178 134 6 723 163 95 0 chr2 26080961 26081108 -227175475 + L1MC3 LINE L1 6118 6278 -1507 * 1032 219 8 4 chr2 26081104 26081342 -227175241 + L1ME1 LINE L1 2595 2833 -3313 * 1438 229 112 35 chr2 26081317 26081897 -227174686 + L1ME1 LINE L1 3154 3778 -2368 987 180 5 38 chr2 26081893 26082104 -227174479 + L1ME1 LINE L1 4735 4938 -1208 * 2300 120 36 31 chr2 26082103 26082495 -227174088 + L1MB7 LINE L1 5771 6164 -20 774 273 187 21 chr2 26082548 26083025 -227173558 - L1ME2 LINE L1 -283 5881 5326 260 277 141 5 chr2 26083144 26083328 -227173255 + L1ME1 LINE L1 5189 5397 -749 279 268 38 89 chr2 26083411 26083568 -227173015 + L1ME3 LINE L1 5961 6109 -53 481 267 162 37 chr2 26083622 26083773 -227172810 + L1ME1 LINE L1 5443 5574 -592 2266 113 0 3 chr2 26083773 26084082 -227172501 + AluSx SINE Alu 1 308 -4 481 267 162 37 chr2 26084082 26084329 -227172254 + L1ME1 LINE L1 5574 5903 -263 536 215 174 0 chr2 26084379 26084528 -227172055 + MER96 DNA MER1_type? 1 175 0 492 93 0 0 chr2 26084534 26084609 -227171974 + (CA)n Simple_repeat Simple_repeat 2 76 0 4751 70 3 2 chr2 26084800 26085410 -227171173 - L1PA8 LINE L1 -5 6167 5557 2223 258 119 40 chr2 26085546 26086512 -227170071 - Charlie7 DNA MER1_type -1450 1162 121 193 304 14 14 chr2 26086659 26086728 -227169855 - MIR SINE MIR -132 130 62 2159 122 0 0 chr2 26087245 26087539 -227169044 + AluY SINE Alu 1 294 -17 342 232 74 0 chr2 26087825 26087920 -227168663 + MIR SINE MIR 161 262 0 598 259 114 11 chr2 26088170 26088432 -227168151 + L1MC4a LINE L1 3875 4163 -1983 25 31 0 0 chr2 26088538 26088570 -227168013 + AT_rich Low_complexity Low_complexity 1 32 0 197 116 0 23 chr2 26089028 26089071 -227167512 + (GAAAA)n Simple_repeat Simple_repeat 4 45 0 2276 97 0 20 chr2 26089107 26089405 -227167178 + AluSx SINE Alu 1 292 -20 3172 167 65 35 chr2 26089567 26089858 -227166725 + L1MC2 LINE L1 5542 5823 -521 2572 65 0 0 chr2 26089858 26090164 -227166419 + AluY SINE Alu 1 306 -5 3172 167 65 35 chr2 26090164 26090580 -227166003 + L1MC2 LINE L1 5823 6270 -74 3213 140 52 2 chr2 26090645 26091201 -227165382 + L1MB3 LINE L1 5599 6182 -1 362 319 87 36 chr2 26091207 26091542 -227165041 + L1MC4a LINE L1 4914 5265 -881 963 135 377 0 chr2 26091604 26091819 -227164764 + AluJb SINE Alu 1 296 -6 307 331 74 0 chr2 26091977 26092140 -227164443 + L1MC4a LINE L1 5766 5940 -1868 419 331 29 0 chr2 26092448 26092584 -227163999 + MER91C DNA MER1_type 1 140 0 375 160 106 43 chr2 26092617 26092711 -227163872 + L1ME2 LINE L1 5987 6086 -78 2242 199 24 26 chr2 26092723 26093186 -227163397 + MER44D DNA MER2_type 89 605 0 286 206 31 20 chr2 26093186 26093278 -227163305 + L1ME2 LINE L1 6081 6334 0 189 203 10 0 chr2 26093434 26093482 -227163101 - MIR SINE MIR -63 145 104 279 0 0 0 chr2 26094104 26094135 -227162448 + (A)n Simple_repeat Simple_repeat 1 31 0 191 265 0 0 chr2 26094242 26094291 -227162292 - L2 LINE L2 0 3272 3224 27 49 0 0 chr2 26094975 26095016 -227161567 + GC_rich Low_complexity Low_complexity 1 41 0 240 207 43 52 chr2 26095482 26095598 -227160985 + (CGGG)n Simple_repeat Simple_repeat 3 117 0 29 47 0 0 chr2 26095610 26095653 -227160930 + GC_rich Low_complexity Low_complexity 1 43 0 234 0 0 0 chr2 26096486 26096512 -227160071 + (CCTG)n Simple_repeat Simple_repeat 2 27 0 2268 97 3 3 chr2 26096635 26096933 -227159650 + AluSx SINE Alu 1 298 -14 198 294 140 79 chr2 26098017 26098193 -227158390 + L2 LINE L2 2425 2624 -690 2214 106 0 10 chr2 26098193 26098494 -227158089 - AluSx SINE Alu -14 298 1 198 294 140 79 chr2 26098494 26098582 -227158001 + L2 LINE L2 2624 2705 -609 2480 86 0 3 chr2 26099004 26099317 -227157266 + AluSq SINE Alu 1 312 -1 261 303 64 117 chr2 26099366 26099498 -227157085 + MLT1H1 LTR MaLR 68 189 -366 2357 95 7 0 chr2 26099498 26099803 -227156780 - AluSg SINE Alu -3 307 1 261 303 64 117 chr2 26099803 26099858 -227156725 + MLT1H1 LTR MaLR 189 245 -310 788 208 68 31 chr2 26099903 26100095 -227156488 + MLT1H1 LTR MaLR 339 537 -18 860 205 100 0 chr2 26100336 26100536 -227156047 - MER58A DNA MER1_type -3 221 2 767 157 8 0 chr2 26100637 26100758 -227155825 - MLT1B LTR MaLR 0 390 269 714 206 0 0 chr2 26100758 26100884 -227155699 + AluJo/FLAM SINE Alu 5 130 -172 1891 110 78 11 chr2 26100884 26101165 -227155418 - AluSx SINE Alu -12 300 1 861 67 0 5 chr2 26101186 26101381 -227155202 - AluY SINE Alu -18 293 2 980 107 7 7 chr2 26101383 26101523 -227155060 - MLT1B LTR MaLR -214 176 37 1969 173 37 25 chr2 26101523 26102072 -227154511 + L1MB8 LINE L1 5006 5547 -631 2306 97 0 10 chr2 26102072 26102380 -227154203 - AluSg SINE Alu -5 305 1 1969 173 37 25 chr2 26102380 26102640 -227153943 + L1MB8 LINE L1 5547 6169 -9 1656 179 17 20 chr2 26102641 26102963 -227153620 - AluJb SINE Alu 0 312 1 2325 57 0 7 chr2 26102966 26103288 -227153295 - AluY SINE Alu 0 320 1 531 297 70 35 chr2 26103387 26103757 -227152826 + L1MC4a LINE L1 4540 4922 -1224 2226 87 10 7 chr2 26103765 26104054 -227152529 + AluSx SINE Alu 9 298 -14 1155 259 59 43 chr2 26104081 26104456 -227152127 + L1MC4a LINE L1 5491 5871 -1937 1332 168 0 9 chr2 26104459 26104679 -227151904 - AluJb SINE Alu -8 304 87 2115 114 3 29 chr2 26104927 26105233 -227151350 + AluSx SINE Alu 1 298 -14 936 288 102 25 chr2 26105238 26105610 -227150973 + L1ME4a LINE L1 5304 5741 -429 2093 138 7 0 chr2 26105610 26105915 -227150668 - AluSx SINE Alu -5 307 1 936 288 102 25 chr2 26105915 26106139 -227150444 + L1ME4a LINE L1 5741 5946 -224 479 230 54 7 chr2 26106370 26106518 -227150065 + L1ME4a LINE L1 5967 6121 0 180 0 0 0 chr2 26106852 26106872 -227149711 + (CCCCCA)n Simple_repeat Simple_repeat 3 22 0 889 187 0 35 chr2 26107952 26108123 -227148460 - FRAM SINE Alu -19 157 1 2154 118 20 0 chr2 26108354 26108650 -227147933 - AluSx SINE Alu -6 306 5 1920 151 6 19 chr2 26109080 26109392 -227147191 + AluJo SINE Alu 1 308 -4 2175 104 7 3 chr2 26109893 26110190 -227146393 - AluSq SINE Alu -13 300 3 2388 64 7 3 chr2 26110422 26110719 -227145864 - AluY SINE Alu -13 298 1 2157 83 3 64 chr2 26110906 26111219 -227145364 + AluSg SINE Alu 2 295 -15 2045 132 3 20 chr2 26111307 26111610 -227144973 + AluJo SINE Alu 1 298 -14 1816 159 23 7 chr2 26111669 26111970 -227144613 - AluJo SINE Alu -6 306 1 691 265 158 32 chr2 26112049 26112524 -227144059 + MLT1F LTR MaLR 1 535 -7 1899 130 58 0 chr2 26112813 26113105 -227143478 + AluSx SINE Alu 1 309 -3 1907 132 7 13 chr2 26113543 26113894 -227142689 - AluSx SINE Alu 0 312 1 1946 137 0 3 chr2 26114348 26114648 -227141935 - AluSc SINE Alu -10 299 1 251 171 0 0 chr2 26114653 26114694 -227141889 - Alu SINE Alu -9 293 253 333 282 96 53 chr2 26114938 26115126 -227141457 + MLT1H LTR MaLR 115 310 -239 231 207 11 69 chr2 26115223 26115328 -227141255 + MLT1F1 LTR MaLR 454 567 0 1763 168 27 0 chr2 26115354 26115652 -227140931 + AluJb SINE Alu 3 308 -4 2616 36 0 0 chr2 26115768 26116075 -227140508 + AluY SINE Alu 1 307 -4 2084 121 0 0 chr2 26116189 26116486 -227140097 - AluSq SINE Alu -16 297 1 2233 89 0 0 chr2 26116547 26116838 -227139745 + AluSx SINE Alu 1 291 -21 221 238 309 0 chr2 26117057 26117141 -227139442 + MIR3 SINE MIR 93 202 -6 2160 116 3 0 chr2 26117141 26117444 -227139139 - AluSq SINE Alu -9 304 1 1808 152 14 7 chr2 26117454 26117751 -227138832 - AluJb SINE Alu -13 299 1 323 275 243 0 chr2 26117885 26118165 -227138418 + L1ME4a LINE L1 5545 5892 -229 2047 116 3 16 chr2 26118268 26118571 -227138012 + AluSx SINE Alu 1 299 -13 1389 189 17 36 chr2 26118660 26118961 -227137622 - AluJo SINE Alu -17 295 1 722 146 0 0 chr2 26118979 26119089 -227137494 - HY1 scRNA scRNA -2 110 1 2464 48 0 0 chr2 26121647 26121940 -227134643 + AluY SINE Alu 1 293 -18 1009 151 11 16 chr2 26121940 26122125 -227134458 - L1MB3 LINE L1 -9 6174 5991 997 152 29 82 chr2 26122608 26122666 -227133917 + AluJo SINE Alu 72 132 -180 1971 135 0 7 chr2 26122666 26122962 -227133621 - AluSx SINE Alu -18 294 1 997 152 29 82 chr2 26122962 26123147 -227133436 + AluJo SINE Alu 132 302 -10 1665 155 14 7 chr2 26123156 26123452 -227133131 + AluJb SINE Alu 5 302 -10 29 0 0 0 chr2 26124883 26124912 -227131671 + AT_rich Low_complexity Low_complexity 1 29 0 2166 121 0 13 chr2 26125057 26125372 -227131211 + AluSq SINE Alu 1 311 -2 7541 112 21 28 chr2 26125481 26126057 -227130526 + Tigger1 DNA MER2_type 6 585 -1833 2219 114 0 0 chr2 26126057 26126365 -227130218 - AluSc SINE Alu -1 308 1 2145 93 14 0 chr2 26126365 26126656 -227129927 - AluSg SINE Alu -15 295 1 7541 112 21 28 chr2 26126656 26126954 -227129629 + Tigger1 DNA MER2_type 584 872 -1546 10586 45 9 33 chr2 26126954 26128363 -227128220 + SVA Other Other 7 1381 -5 7541 112 21 28 chr2 26128363 26128650 -227127933 + Tigger1 DNA MER2_type 872 1160 -1258 2360 79 0 0 chr2 26128650 26128953 -227127630 - AluY SINE Alu -8 303 1 1043 165 18 6 chr2 26128962 26129126 -227127457 - FAM SINE Alu -9 166 1 2180 94 7 3 chr2 26129152 26129450 -227127133 - AluSx SINE Alu -13 299 1 2345 75 0 0 chr2 26129456 26129751 -227126832 - AluSg SINE Alu -15 295 1 853 114 0 0 chr2 26129752 26129866 -227126717 + Tigger1 DNA MER2_type 2304 2417 -1 1934 122 30 7 chr2 26130781 26131084 -227125499 + AluSx SINE Alu 3 312 0 1620 229 125 77 chr2 26131507 26131722 -227124861 + L1M4 LINE L1 2953 3156 -2990 2229 72 0 13 chr2 26131722 26132029 -227124554 + AluY SINE Alu 1 303 -8 1620 161 0 75 chr2 26132039 26132185 -227124398 + AluJo SINE Alu 1 111 -201 1926 122 25 4 chr2 26132185 26132486 -227124097 + AluSx SINE Alu 1 307 0 1620 161 0 75 chr2 26132486 26132673 -227123910 + AluJo SINE Alu 111 310 -2 1620 229 125 77 chr2 26132673 26133000 -227123583 + L1M4 LINE L1 3164 3474 -2672 1649 158 11 11 chr2 26133000 26133284 -227123299 - AluJo SINE Alu -28 284 1 1620 229 125 77 chr2 26133284 26133327 -227123256 + L1M4 LINE L1 3474 3514 -2632 2107 81 0 0 chr2 26133327 26133600 -227122983 + AluSx SINE Alu 34 306 -6 1620 229 125 77 chr2 26133600 26133802 -227122781 + L1M4 LINE L1 3514 3791 -2355 980 185 0 36 chr2 26133871 26134066 -227122517 - LTR2B LTR ERV1 0 490 303 354 259 24 82 chr2 26134056 26134226 -227122357 - LTR2 LTR ERV1 -289 160 1 * 2161 185 25 0 chr2 26134228 26134634 -227121949 + L1M4 LINE L1 3781 4196 -1950 1903 185 42 45 chr2 26134670 26134861 -227121722 + MLT1C LTR MaLR 1 191 -276 2148 125 0 0 chr2 26134861 26135172 -227121411 + AluSx SINE Alu 1 311 -1 1903 185 42 45 chr2 26135172 26135263 -227121320 + MLT1C LTR MaLR 191 281 -186 2341 94 0 0 chr2 26135263 26135572 -227121011 + AluSq SINE Alu 1 309 -4 1903 185 42 45 chr2 26135572 26135737 -227120846 + MLT1C LTR MaLR 281 448 -19 532 101 0 38 chr2 26135739 26135818 -227120765 - AluSq/x SINE Alu -182 130 55 444 300 181 13 chr2 26135828 26136065 -227120518 + MLT1L LTR MaLR 1 277 -338 1114 190 70 162 chr2 26136193 26136410 -227120173 - L2 LINE L2 -664 2650 2415 1757 153 30 3 chr2 26136410 26136710 -227119873 + AluJb SINE Alu 5 312 0 1114 190 70 162 chr2 26136710 26137061 -227119522 - L2 LINE L2 -899 2415 2134 192 200 250 0 chr2 26137177 26137257 -227119326 - MIR SINE MIR 0 262 163 2108 120 0 0 chr2 26137521 26137821 -227118762 + AluSq SINE Alu 9 308 -5 341 82 2 0 chr2 26137834 26137881 -227118702 + Alu SINE Alu 2 43 -258 189 0 0 0 chr2 26138134 26138155 -227118428 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 2027 118 0 0 chr2 26138157 26138436 -227118147 - AluSg SINE Alu -31 279 1 323 340 115 64 chr2 26138542 26138854 -227117729 + L2 LINE L2 2945 3272 0 2046 116 0 26 chr2 26139275 26139577 -227117006 + AluSx SINE Alu 1 294 -18 366 278 94 52 chr2 26139756 26139947 -227116636 + L2 LINE L2 3111 3309 -4 1699 112 51 40 chr2 26139959 26140258 -227116325 - AluSc SINE Alu 0 302 1 1614 126 9 86 chr2 26140263 26140588 -227115995 - AluJb SINE Alu -12 300 1 402 21 0 0 chr2 26141454 26141501 -227115082 + (TG)n Simple_repeat Simple_repeat 2 48 0 385 282 23 38 chr2 26141964 26142095 -227114488 + MIR SINE MIR 29 157 -105 281 273 81 10 chr2 26142582 26142681 -227113902 + MIR SINE MIR 153 258 -4 250 397 9 9 chr2 26142684 26142800 -227113783 - L2 LINE L2 -13 3300 3185 1044 161 13 61 chr2 26142949 26143179 -227113404 + MER20 DNA MER1_type 1 219 0 195 42 0 0 chr2 26143794 26143818 -227112765 + (GA)n Simple_repeat Simple_repeat 2 25 0 570 65 39 0 chr2 26144105 26144182 -227112401 - MADE1 DNA Mariner 0 80 1 6752 50 20 32 chr2 26144539 26146050 -227110533 - SVA Other Other -799 1382 47 181 214 95 0 chr2 26146434 26146476 -227110107 + L2 LINE L2 3218 3263 -9 409 322 60 6 chr2 26147054 26147226 -227109357 + MIR SINE MIR 33 212 -50 216 0 0 0 chr2 26147436 26147460 -227109123 + (A)n Simple_repeat Simple_repeat 1 24 0 1349 229 93 14 chr2 26147530 26147743 -227108840 - MSTD LTR MaLR 0 396 201 1553 161 0 51 chr2 26147743 26148054 -227108529 - AluJo SINE Alu -17 295 1 1349 229 93 14 chr2 26148054 26148207 -227108376 - MSTD LTR MaLR -195 201 1 3910 51 4 0 chr2 26148858 26149331 -227107252 - L1PA6 LINE L1 0 6154 5680 1357 194 127 53 chr2 26149921 26149942 -227106641 - Charlie1 DNA MER1_type -696 2065 2047 351 0 0 0 chr2 26149942 26149981 -227106602 + (TG)n Simple_repeat Simple_repeat 2 40 0 1357 194 127 53 chr2 26149981 26150128 -227106455 - Charlie1 DNA MER1_type -714 2047 1912 2308 84 0 10 chr2 26150128 26150436 -227106147 - AluSx SINE Alu -5 307 3 1357 194 127 53 chr2 26150436 26150683 -227105900 - Charlie1 DNA MER1_type -849 1912 1618 2214 87 0 0 chr2 26150692 26151003 -227105580 + AluY SINE Alu 1 311 0 797 273 18 7 chr2 26151052 26151330 -227105253 + L1ME1 LINE L1 2910 3190 -2956 2928 218 107 44 chr2 26151342 26152254 -227104329 + L1ME1 LINE L1 3815 4810 -1336 1948 107 10 21 chr2 26152254 26152545 -227104038 + AluSg SINE Alu 6 293 -17 2928 218 107 44 chr2 26152545 26152734 -227103849 + L1ME1 LINE L1 4810 4986 -1160 2659 201 154 14 chr2 26152739 26153454 -227103129 + L1ME1 LINE L1 5340 6311 -23 1954 117 7 10 chr2 26153454 26153744 -227102839 - AluSq SINE Alu -24 289 1 1130 196 26 0 chr2 26153845 26154074 -227102509 - AluJo SINE Alu -20 292 58 2731 140 137 17 chr2 26154376 26154954 -227101629 - L1MB3 LINE L1 -11 6172 5526 1290 211 261 8 chr2 26154966 26155444 -227101139 - L1MB3 LINE L1 -807 5339 4741 22 0 0 0 chr2 26155956 26155978 -227100605 + AT_rich Low_complexity Low_complexity 1 22 0 187 292 83 10 chr2 26157755 26157851 -227098732 - MIR SINE MIR -12 250 148 278 282 90 0 chr2 26157925 26158003 -227098580 + L2 LINE L2 3229 3313 0 25 31 0 0 chr2 26160073 26160105 -227096478 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr2 26161270 26161291 -227095292 + AT_rich Low_complexity Low_complexity 1 21 0 233 148 19 37 chr2 26162523 26162577 -227094006 + A-rich Low_complexity Low_complexity 2 54 0 405 0 0 0 chr2 26166836 26166881 -227089702 + (CA)n Simple_repeat Simple_repeat 1 45 0 220 306 41 31 chr2 26167002 26167100 -227089483 + MER5B DNA MER1_type 1 99 -79 2095 132 0 0 chr2 26167117 26167413 -227089170 - AluSx SINE Alu -16 296 1 2369 96 6 6 chr2 26167534 26167846 -227088737 - AluSx SINE Alu 0 312 1 21 0 0 0 chr2 26168017 26168038 -227088545 + AT_rich Low_complexity Low_complexity 1 21 0 221 290 0 0 chr2 26168383 26168452 -227088131 + A-rich Low_complexity Low_complexity 3 71 0 1298 127 19 0 chr2 26168801 26169006 -227087577 + MER2 DNA MER2_type 1 209 -136 1808 140 9 65 chr2 26169787 26170109 -227086474 + AluSg SINE Alu 1 304 -6 2171 92 7 24 chr2 26170126 26170418 -227086165 + AluSx SINE Alu 10 296 -16 762 256 116 0 chr2 26172468 26172675 -227083908 + MIR SINE MIR 32 262 0 1911 170 20 0 chr2 26173258 26173564 -227083019 + AluJb SINE Alu 1 312 0 1740 163 42 7 chr2 26173689 26173972 -227082611 - AluJb SINE Alu -19 293 1 2173 112 13 3 chr2 26174466 26174771 -227081812 + AluSq SINE Alu 1 308 -5 2120 96 24 10 chr2 26174872 26175164 -227081419 - AluSp SINE Alu -17 296 1 186 103 0 0 chr2 26175302 26175331 -227081252 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 309 280 27 75 chr2 26177076 26177262 -227079321 + MER5B DNA MER1_type 1 177 -1 248 224 13 0 chr2 26177391 26177467 -227079116 + L1MB7 LINE L1 6108 6184 0 317 326 11 0 chr2 26177590 26177679 -227078904 + MER5A DNA MER1_type 50 139 -50 24 67 0 0 chr2 26178089 26178134 -227078449 + AT_rich Low_complexity Low_complexity 1 45 0 279 79 0 0 chr2 26178354 26178392 -227078191 + (A)n Simple_repeat Simple_repeat 1 38 0 814 264 42 5 chr2 26178552 26178768 -227077815 - MER58A DNA MER1_type 0 224 1 255 323 87 24 chr2 26178822 26178949 -227077634 - L3 LINE CR1 -103 1474 1340 1991 80 0 112 chr2 26179257 26179595 -227076988 + AluSg SINE Alu 1 300 0 326 254 0 0 chr2 26179618 26179681 -227076902 + L3 LINE CR1 1507 1569 -8 180 0 0 0 chr2 26179822 26179842 -227076741 + (A)n Simple_repeat Simple_repeat 1 20 0 208 266 53 43 chr2 26180352 26180446 -227076137 - MIR3 SINE MIR -15 193 99 2244 108 0 0 chr2 26180859 26181155 -227075428 - AluSx SINE Alu -16 296 1 29 28 0 0 chr2 26182075 26182111 -227074472 + AT_rich Low_complexity Low_complexity 1 36 0 226 250 54 9 chr2 26182120 26182232 -227074351 + L1MC/D LINE L1 5217 5333 -813 357 255 156 82 chr2 26182290 26182521 -227074062 + L1MC/D LINE L1 5412 5659 -2149 560 309 100 31 chr2 26182540 26182890 -227073693 + L1MEd LINE L1 586 959 -5160 386 315 67 30 chr2 26183047 26183293 -227073290 + L1MEd LINE L1 1012 1282 -4849 2410 67 3 0 chr2 26183293 26183593 -227072990 + AluY SINE Alu 1 301 -10 386 315 67 30 chr2 26183593 26183778 -227072805 + L1MEd LINE L1 1282 1459 -4672 2226 120 3 0 chr2 26184284 26184593 -227071990 + AluSx SINE Alu 1 310 -2 328 276 126 36 chr2 26184652 26185072 -227071511 + L1MEd LINE L1 2114 2571 -3558 2302 84 0 20 chr2 26185104 26185403 -227071180 + AluSg SINE Alu 1 293 -17 970 195 81 5 chr2 26185568 26185789 -227070794 - MIR SINE MIR -21 241 4 390 181 23 90 chr2 26185833 26185966 -227070617 + L1MEd LINE L1 2805 2928 -3201 341 298 5 58 chr2 26186127 26186229 -227070354 - L1MC4a LINE L1 -1927 5881 5792 1378 99 43 52 chr2 26186229 26186461 -227070122 + MER30 DNA MER1_type 1 230 0 341 298 5 58 chr2 26186461 26186546 -227070037 - L1MC4a LINE L1 -2016 5792 5704 2328 73 10 3 chr2 26187104 26187407 -227069176 + AluY SINE Alu 1 305 -6 242 342 45 18 chr2 26187665 26187776 -227068807 + L2 LINE L2 3192 3305 -8 22 0 0 0 chr2 26187884 26187906 -227068677 + AT_rich Low_complexity Low_complexity 1 22 0 620 299 76 23 chr2 26187976 26188408 -227068175 - HAL1 LINE L1 -933 1574 1120 445 279 73 59 chr2 26188560 26188764 -227067819 - HAL1 LINE L1 -1877 630 424 1388 155 4 4 chr2 26190212 26190438 -227066145 - AluJb SINE Alu -20 292 67 22 0 0 0 chr2 26190537 26190559 -227066024 + AT_rich Low_complexity Low_complexity 1 22 0 192 97 0 0 chr2 26190731 26190762 -227065821 + (CTG)n Simple_repeat Simple_repeat 2 32 0 448 36 0 0 chr2 26190921 26190977 -227065606 + U2 snRNA snRNA 2 57 -131 983 142 0 13 chr2 26192098 26192253 -227064330 - AluSx SINE Alu -3 309 157 613 103 0 11 chr2 26192254 26192341 -227064242 - AluSx SINE Alu -226 86 1 1922 114 111 0 chr2 26192373 26192653 -227063930 + AluSp SINE Alu 1 311 -2 335 206 10 39 chr2 26192663 26192765 -227063818 + L1MEd LINE L1 3835 3933 -2196 2172 101 14 3 chr2 26192856 26193143 -227063440 + AluSc SINE Alu 1 290 -19 21 0 0 0 chr2 26194183 26194204 -227062379 + AT_rich Low_complexity Low_complexity 1 21 0 2256 105 13 0 chr2 26194351 26194657 -227061926 + AluSp SINE Alu 1 310 -3 2289 92 3 0 chr2 26194827 26195121 -227061462 + AluSx SINE Alu 1 295 -17 2511 63 0 3 chr2 26195284 26195585 -227060998 + AluY SINE Alu 1 300 -11 1946 136 25 0 chr2 26195655 26195941 -227060642 + AluSx SINE Alu 1 293 -19 1200 113 11 0 chr2 26195996 26196173 -227060410 + L1PA15 LINE L1 5981 6159 -6 26 0 0 0 chr2 26196226 26196252 -227060331 + AT_rich Low_complexity Low_complexity 1 26 0 550 276 121 22 chr2 26196285 26196966 -227059617 - L1ME3 LINE L1 -154 6008 5258 1633 107 71 119 chr2 26196990 26197029 -227059554 + THE1C LTR MaLR 1 40 -335 2406 97 0 0 chr2 26197029 26197328 -227059255 - AluSq SINE Alu -14 299 1 1633 107 71 119 chr2 26197328 26197682 -227058901 + THE1C LTR MaLR 40 375 0 322 278 8 8 chr2 26197777 26197903 -227058680 - L1ME3 LINE L1 -1043 5103 4978 2303 194 92 19 chr2 26197971 26198588 -227057995 - L1MB7 LINE L1 -58 6126 5465 1176 178 9 14 chr2 26199002 26199215 -227057368 - AluJo SINE Alu -25 287 76 234 145 17 48 chr2 26199259 26199500 -227057083 + AluJb SINE Alu 1 296 -6 21 0 0 0 chr2 26199586 26199607 -227056976 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 26199822 26199851 -227056732 + AT_rich Low_complexity Low_complexity 1 29 0 273 271 176 0 chr2 26199884 26199969 -227056614 - MIR SINE MIR -111 151 52 859 237 173 39 chr2 26200005 26200444 -227056139 + MLT1D LTR MaLR 8 505 0 474 262 40 25 chr2 26200570 26200772 -227055811 - L1MC4 LINE L1 -1048 6994 6790 251 280 10 50 chr2 26200786 26200898 -227055685 - L1MC5 LINE L1 -1225 6770 6637 2212 109 3 31 chr2 26200976 26201298 -227055285 - AluSq SINE Alu 0 313 1 1945 121 68 0 chr2 26201771 26202051 -227054532 - AluSq SINE Alu -14 299 1 285 163 0 0 chr2 26202118 26202167 -227054416 - Alu SINE Alu -4 304 256 540 296 43 27 chr2 26202193 26202366 -227054217 - L1MC5 LINE L1 -1939 5869 5689 705 260 44 0 chr2 26202366 26202547 -227054036 + MER5A DNA MER1_type 1 189 0 540 296 43 27 chr2 26202547 26202630 -227053953 - L1MC5 LINE L1 -2119 5689 5609 2009 72 12 0 chr2 26202706 26202955 -227053628 + AluY SINE Alu 1 252 -59 192 77 0 0 chr2 26202960 26202986 -227053597 + (A)n Simple_repeat Simple_repeat 1 26 0 858 174 13 0 chr2 26203150 26203322 -227053261 + AluSq SINE Alu 134 307 0 235 89 0 44 chr2 26203454 26203499 -227053084 - AluJo SINE Alu -1 301 259 1012 160 68 48 chr2 26203499 26203571 -227053012 - AluJo SINE Alu -90 222 153 2046 100 24 3 chr2 26203571 26203861 -227052722 - AluSg SINE Alu -14 296 1 1012 160 68 48 chr2 26203861 26203994 -227052589 - AluJo SINE Alu -159 153 13 256 287 6 96 chr2 26204026 26204163 -227052420 - L1 LINE L1 -1896 4250 4139 2141 115 0 3 chr2 26204163 26204471 -227052112 + AluSx SINE Alu 1 307 0 256 287 6 96 chr2 26204471 26204561 -227052022 - L1 LINE L1 -2007 4139 4042 2286 105 0 10 chr2 26204746 26205059 -227051524 + AluSx SINE Alu 1 310 -2 312 266 83 41 chr2 26205376 26205545 -227051038 - L1 LINE L1 -2975 3171 2996 1605 155 40 34 chr2 26205547 26205674 -227050909 + AluJb SINE Alu 1 126 -186 2149 104 0 0 chr2 26205674 26206000 -227050583 + AluSg SINE Alu 1 326 0 1605 155 40 34 chr2 26206000 26206168 -227050415 + AluJb SINE Alu 126 299 -13 1613 245 44 13 chr2 26206368 26206821 -227049762 - MLT1C LTR MaLR 0 467 1 1837 146 4 0 chr2 26207111 26207421 -227049162 - AluSx SINE Alu 0 315 5 2041 136 3 3 chr2 26207454 26207748 -227048835 - AluSx SINE Alu -18 294 1 446 270 132 65 chr2 26207876 26208141 -227048442 + L1M4 LINE L1 3740 3986 -2160 2324 101 0 0 chr2 26208141 26208439 -227048144 - AluSc SINE Alu -11 298 1 446 270 132 65 chr2 26208439 26208471 -227048112 + L1M4 LINE L1 3986 4014 -2132 2105 132 0 7 chr2 26208471 26208774 -227047809 + AluSx SINE Alu 1 301 -11 446 270 132 65 chr2 26208774 26209019 -227047564 + L1M4 LINE L1 4014 4316 -1830 1121 265 56 36 chr2 26209019 26209465 -227047118 + LTR40c LTR ERVL 5 459 -6 918 247 114 42 chr2 26209474 26210158 -227046425 + L1M4 LINE L1 4301 5033 -1113 959 256 118 4 chr2 26210261 26210810 -227045773 - L1M1 LINE L1 -495 5667 5155 376 253 50 68 chr2 26210838 26211059 -227045524 - L1M4 LINE L1 -1386 4760 4544 423 260 95 18 chr2 26211317 26211486 -227045097 + L1ME3A LINE L1 5952 6133 -37 1061 165 55 5 chr2 26211494 26211712 -227044871 + MER46A DNA MER2_type 1 229 -7 238 273 50 40 chr2 26211726 26211825 -227044758 + L1ME3A LINE L1 5910 6009 -161 257 188 109 31 chr2 26212038 26212102 -227044481 + MER5C DNA MER1_type 56 124 -200 212 266 38 0 chr2 26212276 26212355 -227044228 + A-rich Low_complexity Low_complexity 1 82 0 1831 180 23 0 chr2 26212692 26212997 -227043586 - AluJo SINE Alu 0 312 1 2230 98 0 3 chr2 26213107 26213403 -227043180 + AluSg SINE Alu 1 295 -15 2019 130 0 17 chr2 26213909 26214202 -227042381 - AluJo SINE Alu -24 288 1 2281 102 0 10 chr2 26214501 26214806 -227041777 - AluSx SINE Alu -10 302 1 1879 128 72 0 chr2 26214871 26215161 -227041422 + AluSx SINE Alu 1 311 -1 28 0 0 0 chr2 26217677 26217705 -227038878 + AT_rich Low_complexity Low_complexity 1 28 0 315 164 0 30 chr2 26218700 26218767 -227037816 - MER3 DNA MER1_type -4 205 141 3182 159 35 26 chr2 26218771 26219069 -227037514 + L1MC1 LINE L1 4924 5218 -1115 2293 102 0 0 chr2 26219069 26219373 -227037210 + AluSg SINE Alu 5 308 -2 3182 159 35 26 chr2 26219373 26219941 -227036642 + L1MC1 LINE L1 5218 5799 -534 1883 99 21 0 chr2 26219955 26220237 -227036346 + L1PA13 LINE L1 5876 6163 0 2687 135 50 28 chr2 26220238 26220382 -227036201 + L1MC1 LINE L1 5816 5955 -378 2249 110 0 0 chr2 26220382 26220673 -227035910 + AluSq SINE Alu 1 291 -22 2687 135 50 28 chr2 26220673 26221023 -227035560 + L1MC1 LINE L1 5955 6321 -12 553 218 8 38 chr2 26221035 26221168 -227035415 - MER3 DNA MER1_type -80 129 1 834 159 7 21 chr2 26221763 26221908 -227034675 + FLAM_C SINE Alu 1 143 0 1723 162 13 26 chr2 26221912 26222214 -227034369 + AluJb SINE Alu 1 298 -14 613 269 122 46 chr2 26222530 26222768 -227033815 + MIR SINE MIR 6 261 -1 1892 150 3 29 chr2 26222829 26223135 -227033448 - AluJb SINE Alu -14 298 1 255 292 0 34 chr2 26224278 26224367 -227032216 + MER21B LTR ERV1 1 86 -777 329 293 0 0 chr2 26224392 26224467 -227032116 + MER21B LTR ERV1 20 94 -769 2975 176 64 41 chr2 26224468 26224749 -227031834 + MER21B LTR ERV1 48 321 -542 2159 105 0 3 chr2 26224749 26225034 -227031549 + AluSx SINE Alu 1 284 -28 333 0 0 0 chr2 26225034 26225071 -227031512 + (TGAA)n Simple_repeat Simple_repeat 3 39 0 2975 176 64 41 chr2 26225071 26225448 -227031135 + MER21B LTR ERV1 320 722 -141 1741 156 13 13 chr2 26225448 26225756 -227030827 - MER1B DNA MER1_type 0 339 32 536 204 117 0 chr2 26225759 26225896 -227030687 + MER21B LTR ERV1 710 862 -1 434 335 56 14 chr2 26226937 26227152 -227029431 + ERVL LTR ERVL 4851 5074 -690 1854 183 3 0 chr2 26227152 26227463 -227029120 + AluSx SINE Alu 1 312 0 2008 112 36 0 chr2 26227621 26227899 -227028684 + AluSx SINE Alu 1 288 -24 1454 197 3 43 chr2 26228545 26228690 -227027893 + AluJo SINE Alu 1 129 -183 1726 177 3 0 chr2 26228690 26228984 -227027599 + AluJb SINE Alu 1 295 -17 1454 197 3 43 chr2 26228984 26229142 -227027441 + AluJo SINE Alu 129 292 -20 381 269 219 0 chr2 26229618 26229778 -227026805 + MLT1K LTR MaLR 359 553 -35 2194 94 0 0 chr2 26229853 26230128 -227026455 + AluSx SINE Alu 1 275 -37 203 0 0 36 chr2 26230132 26230160 -227026423 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 350 321 70 27 chr2 26230182 26230369 -227026214 + MIR SINE MIR 20 214 -48 1956 130 3 7 chr2 26230736 26231062 -227025521 - AluSx SINE Alu 0 325 1 32 43 0 0 chr2 26231991 26232037 -227024546 + AT_rich Low_complexity Low_complexity 1 46 0 347 267 61 8 chr2 26232909 26233040 -227023543 + MLT1K LTR MaLR 10 147 -441 324 0 0 0 chr2 26233072 26233108 -227023475 + (CA)n Simple_repeat Simple_repeat 2 37 0 2092 128 3 0 chr2 26233421 26233717 -227022866 - AluSx SINE Alu -15 297 1 453 278 108 45 chr2 26235949 26236032 -227020551 + L1MB7 LINE L1 4968 5044 -1120 1595 145 83 25 chr2 26236032 26236141 -227020442 + AluJb SINE Alu 3 104 -208 405 0 0 0 chr2 26236141 26236186 -227020397 + (CA)n Simple_repeat Simple_repeat 2 46 0 1595 145 83 25 chr2 26236186 26236377 -227020206 + AluJb SINE Alu 104 312 0 453 278 108 45 chr2 26236377 26236735 -227019848 + L1MB7 LINE L1 5044 5449 -715 230 119 24 0 chr2 26236769 26236811 -227019772 + L1MC4a LINE L1 7649 7691 -117 23 33 0 0 chr2 26236818 26236848 -227019735 + AT_rich Low_complexity Low_complexity 1 30 0 2132 114 7 10 chr2 26236848 26237138 -227019445 - AluSx SINE Alu -23 289 1 532 207 16 0 chr2 26237138 26237259 -227019324 + L1MD2 LINE L1 6221 6343 -16 2092 121 3 7 chr2 26237266 26237571 -227019012 + AluSq SINE Alu 6 309 -4 319 281 65 78 chr2 26237575 26237881 -227018702 + L1MB7 LINE L1 5480 5781 -2027 404 312 64 0 chr2 26237960 26238085 -227018498 - MIR SINE MIR -74 188 56 1071 246 74 3 chr2 26238361 26238670 -227017913 - MER46C DNA MER2_type 0 338 8 2557 58 0 0 chr2 26238853 26239161 -227017422 + AluY SINE Alu 1 308 -3 248 194 113 16 chr2 26239967 26240029 -227016554 + MIR SINE MIR 84 151 -111 196 278 129 48 chr2 26240192 26240401 -227016182 + L2 LINE L2 2648 2873 -441 304 327 159 9 chr2 26240733 26240953 -227015630 + MLT1K LTR MaLR 336 588 0 815 196 72 0 chr2 26241184 26241337 -227015246 + AluSg/x SINE Alu 134 297 -15 509 212 133 35 chr2 26241816 26241927 -227014656 + HAL1b LINE L1 429 528 -820 2039 128 14 0 chr2 26241927 26242216 -227014367 + AluSx SINE Alu 1 293 -19 509 212 133 35 chr2 26242216 26242330 -227014253 + HAL1b LINE L1 528 676 -672 2082 113 0 7 chr2 26243323 26243606 -227012977 + AluSx SINE Alu 15 295 -17 386 185 146 54 chr2 26243670 26243875 -227012708 + L1MC4 LINE L1 7001 7224 -818 1557 238 145 17 chr2 26243875 26244391 -227012192 + MLT1E LTR MaLR 1 582 -11 2087 207 124 49 chr2 26244399 26244985 -227011598 + L1MC4 LINE L1 7221 7762 -280 198 0 0 0 chr2 26244985 26245007 -227011576 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1718 154 11 28 chr2 26245009 26245295 -227011288 - AluJo SINE Alu -31 281 1 2087 207 124 49 chr2 26245295 26245455 -227011128 + L1MC4 LINE L1 7762 8026 -16 694 232 165 14 chr2 26245534 26245821 -227010762 + L1MB7 LINE L1 5810 6141 -43 1663 175 7 48 chr2 26245823 26245965 -227010618 + AluJo SINE Alu 1 147 -165 2152 88 6 41 chr2 26245965 26246284 -227010299 + AluSp SINE Alu 1 308 -5 1663 175 7 48 chr2 26246284 26246450 -227010133 + AluJo SINE Alu 147 296 -16 236 163 41 0 chr2 26246503 26246552 -227010031 + L1MB7 LINE L1 6134 6184 0 713 135 18 0 chr2 26246561 26246672 -227009911 + AluSq/x SINE Alu 1 113 -200 22 70 0 0 chr2 26249274 26249317 -227007266 + AT_rich Low_complexity Low_complexity 1 43 0 192 77 0 0 chr2 26249549 26249575 -227007008 + (CA)n Simple_repeat Simple_repeat 1 26 0 2645 137 72 14 chr2 26250380 26250897 -227005686 - L1MB2 LINE L1 -2 6169 5623 204 265 73 0 chr2 26251359 26251427 -227005156 - L3 LINE CR1 -297 1280 1208 216 0 0 0 chr2 26251838 26251862 -227004721 + (A)n Simple_repeat Simple_repeat 1 24 0 1365 172 73 40 chr2 26251904 26252206 -227004377 - AluJo SINE Alu 0 312 1 25 31 0 0 chr2 26252213 26252245 -227004338 + AT_rich Low_complexity Low_complexity 1 32 0 2219 101 3 10 chr2 26253298 26253606 -227002977 + AluSp SINE Alu 1 306 -7 2244 115 0 3 chr2 26253618 26253923 -227002660 + AluSg SINE Alu 1 304 -6 181 284 95 40 chr2 26253951 26254025 -227002558 + MIR SINE MIR 16 93 -115 675 245 7 0 chr2 26254177 26254328 -227002255 + AluJo SINE Alu 123 274 -38 282 56 0 0 chr2 26254352 26254388 -227002195 + (CA)n Simple_repeat Simple_repeat 2 37 0 2720 213 124 72 chr2 26254840 26255424 -227001159 + L1MDb LINE L1 311 863 -5543 2105 123 20 0 chr2 26255424 26255717 -227000866 + AluSx SINE Alu 1 299 -13 2720 213 124 72 chr2 26255717 26256112 -227000471 + L1MDb LINE L1 863 1236 -5170 1932 128 60 0 chr2 26256112 26256394 -227000189 + AluSx SINE Alu 1 299 -13 2720 213 124 72 chr2 26256394 26256453 -227000130 + L1MDb LINE L1 1236 1291 -5115 1776 167 28 3 chr2 26256453 26256741 -226999842 + AluJb SINE Alu 1 295 -17 2720 213 124 72 chr2 26256741 26257692 -226998891 + L1MDb LINE L1 1291 2508 -3898 2425 214 80 21 chr2 26257692 26258356 -226998227 + L1MD2 LINE L1 5575 6277 -82 278 163 0 0 chr2 26258420 26258469 -226998114 + MLT1K LTR MaLR 3 51 -537 2211 129 0 3 chr2 26258487 26258782 -226997801 + AluSx SINE Alu 1 294 -18 2166 131 0 0 chr2 26259145 26259457 -226997126 + AluSx SINE Alu 1 312 0 27 0 0 0 chr2 26259506 26259533 -226997050 + AT_rich Low_complexity Low_complexity 1 27 0 2181 112 0 7 chr2 26259903 26260199 -226996384 - AluSx SINE Alu -18 294 1 530 146 37 0 chr2 26261214 26261296 -226995287 + FLAM SINE Alu 43 127 -16 22 0 0 0 chr2 26262613 26262635 -226993948 + AT_rich Low_complexity Low_complexity 1 22 0 1549 154 8 0 chr2 26262644 26262878 -226993705 + AluJb SINE Alu 1 236 -76 1470 136 125 52 chr2 26262909 26263196 -226993387 + AluJb SINE Alu 1 308 -4 320 196 0 56 chr2 26263409 26263516 -226993067 + LTR41 LTR ERVL 662 762 -11 997 68 0 23 chr2 26264690 26264823 -226991760 - AluJb SINE Alu -7 305 176 860 183 0 0 chr2 26264964 26265106 -226991477 - FLAM_C SINE Alu -1 142 1 22 70 0 0 chr2 26265250 26265293 -226991290 + AT_rich Low_complexity Low_complexity 1 43 0 2364 157 37 5 chr2 26265440 26265873 -226990710 - L1MB4 LINE L1 -7 6173 5727 1576 172 17 10 chr2 26266091 26266381 -226990202 + AluJb SINE Alu 1 292 -20 2211 102 0 16 chr2 26266641 26266777 -226989806 + AluSq SINE Alu 2 139 -174 2072 69 0 0 chr2 26266777 26267038 -226989545 + AluY SINE Alu 37 297 -14 2211 102 0 16 chr2 26267038 26267216 -226989367 + AluSq SINE Alu 139 311 -2 587 101 0 0 chr2 26267648 26267727 -226988856 - AluS SINE Alu -233 80 2 204 67 0 0 chr2 26267771 26267801 -226988782 + (TAGA)n Simple_repeat Simple_repeat 4 33 0 333 118 0 0 chr2 26267802 26267818 -226988765 + (TG)n Simple_repeat Simple_repeat 1 67 0 333 118 0 0 chr2 26267818 26267869 -226988714 + (TG)n Simple_repeat Simple_repeat 2 52 0 1983 114 0 49 chr2 26267888 26268094 -226988489 - AluSx SINE Alu -3 309 123 2189 73 7 16 chr2 26268094 26268397 -226988186 + AluY SINE Alu 1 300 -11 1983 114 0 49 chr2 26268397 26268515 -226988068 - AluSx SINE Alu -189 123 1 877 187 12 0 chr2 26268751 26268917 -226987666 + FAM SINE Alu 1 49 0 374 285 21 61 chr2 26269014 26269229 -226987354 - MER20B DNA MER1_type -4 215 4 1931 137 16 0 chr2 26269375 26269681 -226986902 + AluSx SINE Alu 1 311 -1 1299 211 39 0 chr2 26269726 26270011 -226986572 - AluJo SINE Alu -16 296 1 25 31 0 0 chr2 26270518 26270550 -226986033 + AT_rich Low_complexity Low_complexity 1 32 0 29 78 0 0 chr2 26270650 26270714 -226985869 + AT_rich Low_complexity Low_complexity 1 64 0 360 310 50 72 chr2 26270950 26271269 -226985314 + L1MDa LINE L1 21 332 -6208 2173 112 0 7 chr2 26271438 26271741 -226984842 + AluSx SINE Alu 1 301 -11 866 169 39 0 chr2 26271741 26271895 -226984688 + AluSg/x SINE Alu 132 291 -19 419 273 72 24 chr2 26271896 26272105 -226984478 + L1MDa LINE L1 1070 1288 -5255 252 234 16 16 chr2 26272602 26272666 -226983917 + L2 LINE L2 2310 2373 -941 504 238 104 0 chr2 26272822 26272986 -226983597 + L1MC5 LINE L1 7720 7900 -61 2073 91 0 7 chr2 26273415 26273729 -226982854 + AluY SINE Alu 1 312 0 1994 128 3 0 chr2 26273838 26274134 -226982449 + AluSq SINE Alu 1 297 -16 1628 154 0 47 chr2 26274230 26274548 -226982035 + AluSx SINE Alu 1 303 -9 1515 141 0 4 chr2 26274549 26274783 -226981800 - AluJb SINE Alu -12 300 68 808 161 8 0 chr2 26274783 26274913 -226981670 - AluJo/FLAM SINE Alu -181 131 1 1759 179 113 136 chr2 26275035 26275939 -226980644 - L1MC5 LINE L1 -30 7931 7051 2004 113 26 22 chr2 26275939 26276250 -226980333 + AluSq SINE Alu 1 312 -1 1759 179 113 136 chr2 26276250 26276338 -226980245 - L1MC5 LINE L1 -910 7051 6962 1303 143 0 31 chr2 26276765 26276988 -226979595 + AluSg/x SINE Alu 83 298 -14 412 336 125 19 chr2 26277663 26278079 -226978504 - L2 LINE L2 -1110 2204 1745 265 281 210 27 chr2 26278424 26278648 -226977935 + L2 LINE L2 1946 2210 -1104 993 111 0 76 chr2 26278710 26278882 -226977701 - FRAM SINE Alu -17 159 1 799 235 36 25 chr2 26279349 26279545 -226977038 - MIR SINE MIR -2 260 63 291 232 63 42 chr2 26279548 26279643 -226976940 + HERVL LTR ERVL 4203 4299 -1355 331 322 101 0 chr2 26279762 26279920 -226976663 + HERVL LTR ERVL 5177 5343 -142 978 106 0 7 chr2 26280433 26280604 -226975979 - AluSg/x SINE Alu 0 308 139 2177 99 3 7 chr2 26280607 26280909 -226975674 - AluSx SINE Alu -11 301 1 189 0 0 0 chr2 26280914 26280935 -226975648 + (T)n Simple_repeat Simple_repeat 1 21 0 423 292 82 31 chr2 26281654 26281920 -226974663 - MLT1J LTR MaLR -119 331 64 856 271 43 60 chr2 26282056 26282406 -226974177 + L2 LINE L2 2876 3219 -94 644 152 0 0 chr2 26282407 26282532 -226974051 - AluSg/x SINE Alu 0 314 190 514 152 0 54 chr2 26282535 26282627 -226973956 + L2 LINE L2 3212 3298 -15 21 36 0 0 chr2 26282774 26282802 -226973781 + AT_rich Low_complexity Low_complexity 1 28 0 2058 106 7 7 chr2 26282998 26283301 -226973282 + AluSc SINE Alu 5 307 -2 189 171 0 0 chr2 26283305 26283340 -226973243 + A-rich Low_complexity Low_complexity 1 35 0 618 126 0 0 chr2 26283362 26283449 -226973134 + FRAM SINE Alu 75 161 -15 731 193 31 68 chr2 26283449 26283537 -226973046 + L2 LINE L2 3129 3219 -94 1828 139 20 14 chr2 26283537 26283832 -226972751 - AluSx SINE Alu -15 297 1 731 193 31 68 chr2 26283832 26283935 -226972648 + L2 LINE L2 3219 3313 0 443 256 74 78 chr2 26283955 26284224 -226972359 - MLT1J LTR MaLR -241 270 3 1992 101 42 3 chr2 26284269 26284557 -226972026 - AluSq SINE Alu -14 299 1 2138 114 0 9 chr2 26284619 26284934 -226971649 + AluSx SINE Alu 1 312 0 793 165 0 8 chr2 26284987 26285120 -226971463 - FLAM_A SINE Alu -1 132 1 2133 105 0 10 chr2 26285954 26286267 -226970316 - AluSx SINE Alu -2 310 1 207 326 184 31 chr2 26286429 26286625 -226969958 + MIR SINE MIR 3 228 -34 2062 112 10 0 chr2 26286939 26287233 -226969350 - AluSq SINE Alu -16 297 1 2142 113 0 0 chr2 26287590 26287890 -226968693 - AluSx SINE Alu -12 300 1 24 0 0 0 chr2 26288150 26288174 -226968409 + AT_rich Low_complexity Low_complexity 1 24 0 234 128 0 0 chr2 26288430 26288469 -226968114 + (CA)n Simple_repeat Simple_repeat 2 40 0 204 179 0 0 chr2 26290266 26290305 -226966278 + (CA)n Simple_repeat Simple_repeat 1 39 0 2192 93 3 7 chr2 26291023 26291323 -226965260 - AluSx SINE Alu -13 299 1 484 275 67 7 chr2 26291323 26291472 -226965111 + MIR SINE MIR 91 248 -14 1994 128 10 3 chr2 26291633 26291938 -226964645 - AluSx SINE Alu -3 309 3 1564 122 106 0 chr2 26292342 26292588 -226963995 + AluSx SINE Alu 1 272 -40 200 227 0 15 chr2 26292588 26292644 -226963939 + GA-rich Low_complexity Low_complexity 12 68 0 246 193 0 35 chr2 26293176 26293233 -226963350 + LTR54 LTR ERV1 402 456 -54 1807 147 17 0 chr2 26293237 26293529 -226963054 - AluSx SINE Alu -15 297 1 2024 111 7 17 chr2 26293544 26293841 -226962742 - AluSx SINE Alu -18 294 1 222 223 69 56 chr2 26293871 26293950 -226962633 + MIR SINE MIR 51 130 -78 417 248 18 9 chr2 26294594 26294707 -226961876 - MIR SINE MIR -129 133 20 498 254 176 8 chr2 26294801 26295045 -226961538 + L1ME LINE L1 5450 5734 -436 491 211 66 26 chr2 26295100 26295252 -226961331 - L1ME4a LINE L1 -17 6104 5947 850 157 0 0 chr2 26295269 26295403 -226961180 + AluJo SINE Alu 1 134 -178 1949 95 0 41 chr2 26295491 26295814 -226960769 - AluSc SINE Alu 0 311 1 454 210 76 112 chr2 26295828 26295948 -226960635 - L1ME4a LINE L1 -303 5818 5708 1659 176 17 0 chr2 26295948 26296238 -226960345 + AluJo SINE Alu 1 295 -17 454 210 76 112 chr2 26296238 26296341 -226960242 - L1ME4a LINE L1 -413 5708 5603 2161 119 0 0 chr2 26296345 26296648 -226959935 - AluSx SINE Alu -9 303 1 860 209 0 28 chr2 26296654 26296831 -226959752 - FAM SINE Alu -3 172 1 4319 136 50 79 chr2 26296842 26297007 -226959576 - L1MB7 LINE L1 0 6184 6016 2030 121 3 7 chr2 26297007 26297313 -226959270 - AluSx SINE Alu -7 305 1 4319 136 50 79 chr2 26297313 26297917 -226958666 - L1MB7 LINE L1 -168 6016 5442 1932 141 0 16 chr2 26297917 26298221 -226958362 - AluJb SINE Alu -13 299 1 4319 136 50 79 chr2 26298221 26298337 -226958246 - L1MB7 LINE L1 -742 5442 5324 1873 132 3 36 chr2 26298337 26298641 -226957942 - AluSx SINE Alu -18 294 1 327 259 12 0 chr2 26298641 26298726 -226957857 - L1MB7 LINE L1 -1321 4825 4740 2196 92 0 0 chr2 26298726 26299059 -226957524 - AluSx SINE Alu 0 333 1 394 262 59 0 chr2 26299067 26299205 -226957378 + L1MC4 LINE L1 1969 6988 -1334 697 226 0 0 chr2 26299235 26299368 -226957215 + FLAM_C SINE Alu 1 133 0 7195 102 181 86 chr2 26299388 26300937 -226955646 - pTR5 LTR ERV1 0 2438 743 782 176 23 0 chr2 26300937 26301068 -226955515 + AluJb SINE Alu 147 280 -32 189 0 0 0 chr2 26301070 26301091 -226955492 + (TAA)n Simple_repeat Simple_repeat 2 22 0 27 73 0 0 chr2 26301109 26301164 -226955419 + AT_rich Low_complexity Low_complexity 1 55 0 2051 107 14 0 chr2 26301243 26301533 -226955050 + AluSq SINE Alu 1 294 -19 1683 85 71 57 chr2 26301539 26301649 -226954934 + AluSx SINE Alu 13 120 -192 2139 88 0 3 chr2 26301649 26301956 -226954627 + AluSx SINE Alu 1 306 0 1683 85 71 57 chr2 26301956 26302125 -226954458 + AluSx SINE Alu 120 297 -15 277 99 0 28 chr2 26302292 26302539 -226954044 + AluJb SINE Alu 1 303 0 216 0 0 0 chr2 26303551 26303575 -226953008 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 427 178 36 234 chr2 26303652 26303874 -226952709 + L2 LINE L2 2540 2804 -510 1911 129 10 3 chr2 26303874 26304183 -226952400 + AluSx SINE Alu 1 311 -1 1821 149 0 7 chr2 26304188 26304489 -226952094 + AluJo SINE Alu 13 311 -1 427 178 36 234 chr2 26304489 26304564 -226952019 + L2 LINE L2 2695 2783 -531 7709 21 8 291 chr2 26304669 26306531 -226950052 + SVA Other Other 62 1407 0 202 244 24 0 chr2 26306531 26306572 -226950011 + L2 LINE L2 2773 2814 -500 1147 130 5 65 chr2 26306575 26306790 -226949793 - AluJo SINE Alu -4 308 107 615 107 0 0 chr2 26306800 26306884 -226949699 + AluSp/q SINE Alu 215 298 -15 * 665 172 9 9 chr2 26306879 26306995 -226949588 - AluJo SINE Alu -195 117 2 1161 128 12 0 chr2 26307048 26307220 -226949363 + AluSx SINE Alu 1 174 -138 985 129 80 54 chr2 26307475 26307558 -226949025 - AluSx SINE Alu -82 230 151 1859 103 21 4 chr2 26307558 26307839 -226948744 - AluSx SINE Alu -22 290 5 985 129 80 54 chr2 26307839 26307979 -226948604 - AluSx SINE Alu -161 151 1 2070 108 0 0 chr2 26307999 26308276 -226948307 - AluSx SINE Alu -35 277 1 503 256 64 29 chr2 26308289 26308461 -226948122 - MLT1H LTR MaLR -249 300 123 449 299 6 92 chr2 26308642 26308693 -226947890 + LTR16C LTR ERVL 80 134 -357 1850 122 38 0 chr2 26308693 26308980 -226947603 - AluSp SINE Alu -15 298 1 449 299 6 92 chr2 26308980 26309102 -226947481 + LTR16C LTR ERVL 134 238 -253 1951 124 28 0 chr2 26309104 26309394 -226947189 - AluSg SINE Alu -12 298 1 576 154 48 2 chr2 26309397 26309726 -226946857 + L1MC2 LINE L1 6137 6449 -1309 463 90 26 0 chr2 26309726 26309804 -226946779 + (TA)n Simple_repeat Simple_repeat 1 80 0 576 154 48 2 chr2 26309804 26309818 -226946765 + L1MC2 LINE L1 6449 6461 -1297 558 217 83 0 chr2 26309818 26309938 -226946645 - FLAM_A SINE Alu -3 130 1 576 154 48 2 chr2 26309938 26309957 -226946626 + L1MC2 LINE L1 6461 7758 0 774 248 78 24 chr2 26309970 26310262 -226946321 + MLT1G LTR MaLR 40 325 -270 327 146 0 0 chr2 26310596 26310644 -226945939 + Alu SINE Alu 1 48 -254 325 115 0 82 chr2 26310641 26310686 -226945897 + MLT1A1 LTR MaLR 255 295 -70 * 2242 100 7 0 chr2 26310686 26310995 -226945588 - AluSp SINE Alu -2 311 1 325 115 0 82 chr2 26310995 26311010 -226945573 + MLT1A1 LTR MaLR 295 310 -55 252 86 0 0 chr2 26311010 26311045 -226945538 + (CAT)n Simple_repeat Simple_repeat 2 36 0 849 150 94 22 chr2 26311047 26311227 -226945356 - AluJb SINE Alu -27 285 93 451 130 0 26 chr2 26311237 26311314 -226945269 + MLT1A1 LTR MaLR 291 365 0 2127 110 3 3 chr2 26311761 26312061 -226944522 + AluSg SINE Alu 1 300 -10 2027 119 37 0 chr2 26312100 26312395 -226944188 + AluSx SINE Alu 1 306 -6 227 189 19 0 chr2 26312608 26312661 -226943922 + (TA)n Simple_repeat Simple_repeat 1 54 0 1846 117 39 0 chr2 26312661 26312942 -226943641 - AluSx SINE Alu -20 292 1 804 158 21 68 chr2 26312943 26313177 -226943406 - L1MC5 LINE L1 -173 7788 7566 479 333 102 30 chr2 26313195 26313528 -226943055 + L2 LINE L2 2880 3236 -36 700 152 6 116 chr2 26314087 26314119 -226942464 + FAM SINE Alu 4 38 -283 2136 113 0 0 chr2 26314119 26314420 -226942163 - AluSx SINE Alu -11 301 1 700 152 6 116 chr2 26314420 26314551 -226942032 + FAM SINE Alu 38 149 -36 546 221 129 150 chr2 26314653 26314795 -226941788 - L2 LINE L2 -1 3312 3169 1780 195 41 31 chr2 26314795 26315185 -226941398 + MSTD LTR MaLR 1 394 -2 1896 113 13 17 chr2 26315185 26315309 -226941274 + AluSg SINE Alu 12 135 -175 2122 84 3 20 chr2 26315309 26315606 -226940977 + AluY SINE Alu 1 292 -19 1896 113 13 17 chr2 26315606 26315781 -226940802 + AluSg SINE Alu 135 310 0 546 221 129 150 chr2 26315781 26315801 -226940782 - L2 LINE L2 -143 3170 3151 944 230 5 0 chr2 26315801 26315988 -226940595 - MER5A DNA MER1_type 0 189 2 546 221 129 150 chr2 26315988 26316203 -226940380 - L2 LINE L2 -162 3151 2941 2233 119 0 0 chr2 26316203 26316514 -226940069 + AluSx SINE Alu 1 311 -1 1967 115 0 10 chr2 26316521 26316809 -226939774 + AluSg SINE Alu 1 285 -25 1411 238 109 18 chr2 26316914 26317392 -226939191 + L1MC4 LINE L1 7178 8019 -23 2163 79 7 0 chr2 26317392 26317695 -226938888 - AluSg SINE Alu 0 305 1 23 0 0 0 chr2 26317707 26317730 -226938853 + AT_rich Low_complexity Low_complexity 1 23 0 2035 138 0 0 chr2 26317735 26318046 -226938537 + AluSx SINE Alu 1 311 -1 279 293 30 10 chr2 26318100 26318199 -226938384 + MIR3 SINE MIR 54 154 -54 1734 149 18 0 chr2 26318225 26318500 -226938083 + AluJo SINE Alu 7 286 -26 279 0 0 0 chr2 26318509 26318540 -226938043 + (CAT)n Simple_repeat Simple_repeat 2 32 0 1462 114 71 36 chr2 26318830 26319110 -226937473 + AluSq SINE Alu 18 307 -6 1445 189 0 0 chr2 26319224 26319483 -226937100 + AluJb SINE Alu 47 305 -7 21 0 0 0 chr2 26319778 26319799 -226936784 + AT_rich Low_complexity Low_complexity 1 21 0 532 207 0 0 chr2 26319801 26319888 -226936695 - AluJ/FLAM SINE Alu -221 91 5 2111 94 17 0 chr2 26319900 26320198 -226936385 - AluSx SINE Alu -9 303 1 1888 153 3 7 chr2 26320471 26320779 -226935804 + AluJo SINE Alu 1 307 -5 969 176 0 0 chr2 26320854 26321019 -226935564 - FAM SINE Alu -10 175 11 240 35 0 0 chr2 26321030 26321059 -226935524 + (A)n Simple_repeat Simple_repeat 1 29 0 1030 156 6 17 chr2 26321346 26321525 -226935058 + L1MB2 LINE L1 5949 6125 -46 216 67 0 0 chr2 26321530 26321560 -226935023 + (TTG)n Simple_repeat Simple_repeat 2 31 0 2090 92 3 3 chr2 26321563 26321845 -226934738 - AluSp SINE Alu -31 282 1 1612 104 4 13 chr2 26321917 26322148 -226934435 + AluSg SINE Alu 4 232 -78 2134 86 3 7 chr2 26322248 26322539 -226934044 - AluSq SINE Alu -23 290 1 726 206 0 8 chr2 26322539 26322665 -226933918 - FLAM_A SINE Alu -8 125 1 23 33 0 0 chr2 26322702 26322732 -226933851 + AT_rich Low_complexity Low_complexity 1 30 0 251 233 0 17 chr2 26322833 26322893 -226933690 + L1ME LINE L1 5505 5563 -558 245 319 60 0 chr2 26322977 26323093 -226933490 + L1ME LINE L1 3 125 -5945 * 2793 225 50 17 chr2 26323079 26323329 -226933254 + L1M4 LINE L1 2674 2914 -3232 756 177 15 0 chr2 26323329 26323459 -226933124 + FLAM_C SINE Alu 2 133 0 2104 87 37 0 chr2 26323467 26323765 -226932818 + AluSp SINE Alu 4 312 -1 2793 225 50 17 chr2 26323765 26323858 -226932725 + L1M4 LINE L1 2920 3008 -3138 1931 114 17 0 chr2 26323858 26324148 -226932435 + AluSg SINE Alu 1 295 -15 1948 131 7 7 chr2 26324155 26324460 -226932123 + AluJb SINE Alu 2 306 -6 2793 225 50 17 chr2 26324460 26325017 -226931566 + L1M4 LINE L1 3013 3622 -2524 378 190 63 5 chr2 26325022 26325145 -226931438 + Tigger5 DNA MER2_type 7 194 -2129 * 412 228 13 0 chr2 26325142 26325221 -226931362 + Tigger5 DNA MER2_type 2244 2323 0 385 161 23 0 chr2 26325251 26325338 -226931245 + L1M4 LINE L1 3680 3768 -2378 183 259 32 152 chr2 26325940 26326018 -226930565 - L2 LINE L2 -4 3309 3258 1794 128 3 32 chr2 26326018 26326331 -226930252 - AluSx SINE Alu -8 304 1 183 259 32 152 chr2 26326331 26326410 -226930173 - L2 LINE L2 -55 3258 3171 2098 101 0 7 chr2 26326473 26326770 -226929813 + AluSc SINE Alu 1 295 -14 2205 100 0 3 chr2 26326836 26327147 -226929436 + AluY SINE Alu 1 310 -1 1964 131 0 0 chr2 26327149 26327465 -226929118 + AluSx SINE Alu 1 316 0 2047 97 35 3 chr2 26328259 26328548 -226928035 - AluSq SINE Alu -15 298 1 936 162 87 140 chr2 26328860 26328993 -226927590 + MER44D DNA MER2_type 1 140 -2351 1944 121 0 48 chr2 26328993 26329158 -226927425 - AluSx SINE Alu -14 298 153 2205 112 0 3 chr2 26329158 26329471 -226927112 - AluSp SINE Alu -1 312 1 1944 121 0 48 chr2 26329471 26329618 -226926965 - AluSx SINE Alu -159 153 1 936 162 87 140 chr2 26329618 26329808 -226926775 + MER44D DNA MER2_type 140 339 -2152 2218 109 0 3 chr2 26329808 26330121 -226926462 + AluSp SINE Alu 2 313 0 936 162 87 140 chr2 26330121 26330154 -226926429 + MER44D DNA MER2_type 339 609 0 1900 116 35 3 chr2 26330281 26330565 -226926018 - AluSx SINE Alu -19 293 1 2106 113 7 0 chr2 26330630 26330931 -226925652 - AluSc SINE Alu -6 303 1 942 95 7 15 chr2 26330933 26331070 -226925513 - AluSq/x SINE Alu -176 136 1 431 241 6 100 chr2 26331098 26331181 -226925402 + L1MB7 LINE L1 4672 4734 -1412 2182 92 0 0 chr2 26331181 26331513 -226925070 + AluSx SINE Alu 2 333 0 431 241 6 100 chr2 26331513 26331598 -226924985 + L1MB7 LINE L1 4734 4825 -1321 1873 132 3 36 chr2 26331598 26331902 -226924681 + AluSx SINE Alu 1 294 -18 4319 136 50 79 chr2 26331902 26332018 -226924565 + L1MB7 LINE L1 5324 5442 -742 1932 141 0 16 chr2 26332018 26332322 -226924261 + AluJb SINE Alu 1 299 -13 4319 136 50 79 chr2 26332322 26332926 -226923657 + L1MB7 LINE L1 5442 6016 -168 2030 121 3 7 chr2 26332926 26333232 -226923351 + AluSx SINE Alu 1 305 -7 4319 136 50 79 chr2 26333232 26333397 -226923186 + L1MB7 LINE L1 6016 6184 0 860 209 0 28 chr2 26333408 26333585 -226922998 + FAM SINE Alu 1 172 -3 2161 119 0 0 chr2 26333591 26333894 -226922689 + AluSx SINE Alu 1 303 -9 454 210 76 112 chr2 26333898 26334001 -226922582 + L1ME4a LINE L1 5603 5708 -413 1659 176 17 0 chr2 26334001 26334291 -226922292 - AluJo SINE Alu -17 295 1 454 210 76 112 chr2 26334291 26334411 -226922172 + L1ME4a LINE L1 5708 5818 -303 1950 95 0 41 chr2 26334425 26334748 -226921835 + AluSc SINE Alu 1 311 0 850 157 0 0 chr2 26334836 26334970 -226921613 - AluJo SINE Alu -178 134 1 491 211 66 26 chr2 26334987 26335139 -226921444 + L1ME4a LINE L1 5947 6104 -17 498 254 176 8 chr2 26335194 26335438 -226921145 - L1ME LINE L1 -436 5734 5450 406 250 18 9 chr2 26335533 26335645 -226920938 + MIR SINE MIR 21 133 -129 222 223 69 56 chr2 26336289 26336368 -226920215 - MIR SINE MIR -78 130 51 2024 111 7 17 chr2 26336398 26336695 -226919888 + AluSx SINE Alu 1 294 -18 1807 147 17 0 chr2 26336710 26337002 -226919581 + AluSx SINE Alu 1 297 -15 246 193 0 35 chr2 26337006 26337063 -226919520 - LTR54 LTR ERV1 -54 456 402 200 227 0 15 chr2 26337595 26337651 -226918932 + CT-rich Low_complexity Low_complexity 4 60 -8 1564 122 106 0 chr2 26337651 26337897 -226918686 - AluSx SINE Alu -40 272 1 1994 128 10 3 chr2 26338301 26338606 -226917977 + AluSx SINE Alu 3 309 -3 484 275 67 7 chr2 26338767 26338916 -226917667 - MIR SINE MIR -14 248 91 2132 97 3 25 chr2 26338916 26339236 -226917347 + AluSq SINE Alu 1 313 0 2051 260 31 40 chr2 26339354 26340001 -226916582 - MER21B LTR ERV1 -125 738 98 523 179 24 0 chr2 26340207 26340291 -226916292 + FRAM/FAM SINE Alu 1 79 -97 204 179 0 0 chr2 26342116 26342155 -226914428 + (CA)n Simple_repeat Simple_repeat 1 39 0 2270 94 0 0 chr2 26342892 26343191 -226913392 - AluSx SINE Alu -13 299 1 674 377 503 0 chr2 26343503 26343636 -226912947 + MER44D DNA MER2_type 1 22 -2465 1944 121 0 48 chr2 26343636 26343801 -226912782 - AluSx SINE Alu -14 298 153 2205 112 0 3 chr2 26343801 26344114 -226912469 - AluSp SINE Alu -1 312 1 1944 121 0 48 chr2 26344114 26344261 -226912322 - AluSx SINE Alu -159 153 1 674 377 503 0 chr2 26344261 26344297 -226912286 + MER44D DNA MER2_type 22 27 -2460 358 89 0 0 chr2 26344297 26344353 -226912230 + L1MA2 LINE L1 6249 6304 0 674 377 503 0 chr2 26344353 26344450 -226912133 + MER44D DNA MER2_type 27 583 -22 1941 97 4 4 chr2 26344451 26344718 -226911865 + AluSp SINE Alu 2 268 -45 374 274 0 0 chr2 26344745 26344840 -226911743 + MIR SINE MIR 167 261 -1 2006 141 0 0 chr2 26344859 26345158 -226911425 - AluSx SINE Alu -13 299 1 765 194 8 0 chr2 26345308 26345437 -226911146 - FLAM_A SINE Alu -3 130 1 2134 118 0 0 chr2 26345736 26346033 -226910550 + AluSg SINE Alu 1 297 -13 208 256 0 0 chr2 26346051 26346094 -226910489 + L2 LINE L2 3172 3214 -58 1100 161 20 5 chr2 26346166 26346365 -226910218 + AluSg/x SINE Alu 103 304 -6 1486 185 0 18 chr2 26346365 26346651 -226909932 - AluJo SINE Alu -31 281 1 248 291 63 0 chr2 26347021 26347100 -226909483 + MIR SINE MIR 41 124 -138 1375 164 0 4 chr2 26347157 26347383 -226909200 - AluSx SINE Alu -87 225 1 661 298 82 76 chr2 26347383 26347494 -226909089 - L2 LINE L2 -12 3301 3192 889 134 0 8 chr2 26347494 26347628 -226908955 - FLAM_C SINE Alu 0 133 1 661 298 82 76 chr2 26347628 26347990 -226908593 - L2 LINE L2 -121 3192 2825 601 278 21 11 chr2 26347995 26348182 -226908401 - L2 LINE L2 -1941 1373 1185 1888 133 9 46 chr2 26348401 26348573 -226908010 - AluSx SINE Alu -1 311 134 414 0 0 0 chr2 26348573 26348619 -226907964 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 2056 80 0 60 chr2 26348619 26348919 -226907664 - AluSg SINE Alu -28 282 1 2178 114 0 0 chr2 26348922 26349228 -226907355 - AluSg SINE Alu -4 306 1 2313 39 11 0 chr2 26349234 26349545 -226907038 - AluY SINE Alu 0 314 1 1888 133 9 46 chr2 26349545 26349682 -226906901 - AluSx SINE Alu -184 128 1 1659 179 3 19 chr2 26349779 26349947 -226906636 - AluJo SINE Alu -10 302 140 2082 114 0 0 chr2 26349947 26350246 -226906337 - AluSg SINE Alu -11 299 1 1659 179 3 19 chr2 26350246 26350384 -226906199 - AluJo SINE Alu -172 140 1 1985 130 0 3 chr2 26351081 26351373 -226905210 + AluSx SINE Alu 3 293 -19 666 324 32 0 chr2 26351561 26351780 -226904803 + LTR16C LTR ERVL 1 226 -265 950 227 94 72 chr2 26351797 26352025 -226904558 - MLT1H LTR MaLR -4 545 303 2127 107 3 0 chr2 26352025 26352315 -226904268 - AluSx SINE Alu -21 291 1 950 227 94 72 chr2 26352315 26352500 -226904083 - MLT1H LTR MaLR -246 303 123 449 299 6 92 chr2 26352681 26352732 -226903851 + LTR16C LTR ERVL 80 134 -357 1912 114 35 3 chr2 26352732 26353021 -226903562 - AluSp SINE Alu -15 298 1 449 299 6 92 chr2 26353021 26353143 -226903440 + LTR16C LTR ERVL 134 238 -253 1951 124 28 0 chr2 26353145 26353435 -226903148 - AluSg SINE Alu -12 298 1 1939 151 39 0 chr2 26353438 26353769 -226902814 + L1MC3 LINE L1 7418 7761 -24 364 158 158 0 chr2 26353769 26353845 -226902738 - L1MC4 LINE L1 -1340 6702 6615 300 276 35 0 chr2 26353770 26353857 -226902726 + L1MC4 LINE L1 6614 6703 -1339 * 558 217 83 0 chr2 26353859 26353979 -226902604 - FLAM_A SINE Alu -3 130 1 774 248 78 24 chr2 26354011 26354303 -226902280 + MLT1G LTR MaLR 40 325 -270 327 146 0 0 chr2 26354637 26354685 -226901898 + Alu SINE Alu 1 48 -255 * 361 89 36 0 chr2 26354683 26354739 -226901844 + MSTD LTR MaLR 284 341 -55 491 313 88 46 chr2 26354766 26355475 -226901108 + L1MEd LINE L1 636 1283 -4848 2321 67 3 0 chr2 26355475 26355775 -226900808 + AluY SINE Alu 1 301 -10 491 313 88 46 chr2 26355775 26355960 -226900623 + L1MEd LINE L1 1283 1459 -4672 2116 120 3 0 chr2 26356466 26356775 -226899808 + AluSx SINE Alu 1 310 -2 439 276 126 36 chr2 26356834 26357254 -226899329 + L1MEd LINE L1 2114 2571 -3558 2191 84 0 20 chr2 26357286 26357585 -226898998 + AluSg SINE Alu 1 293 -17 985 190 81 5 chr2 26357750 26357971 -226898612 - MIR SINE MIR -21 241 4 448 181 23 90 chr2 26358015 26358148 -226898435 + L1MEd LINE L1 2805 2928 -3201 779 105 53 0 chr2 26358411 26358525 -226898058 + MER30 DNA MER1_type 1 120 -110 216 0 0 0 chr2 26358630 26358654 -226897929 + (A)n Simple_repeat Simple_repeat 1 24 0 2166 86 10 3 chr2 26358970 26359273 -226897310 - AluSc SINE Alu -3 306 2 24 32 0 0 chr2 26359559 26359590 -226896993 + AT_rich Low_complexity Low_complexity 1 31 0 1113 102 17 34 chr2 26359595 26359741 -226896842 - AluSg/x SINE Alu -30 280 136 2386 67 3 0 chr2 26359741 26360040 -226896543 - AluSp SINE Alu -12 301 2 1113 102 17 34 chr2 26360040 26360070 -226896513 - AluSg/x SINE Alu -174 136 107 621 189 79 0 chr2 26360168 26360295 -226896288 + FLAM_C SINE Alu 2 138 -5 438 179 36 12 chr2 26360858 26360942 -226895641 - MLT1E1 LTR MaLR -50 604 519 1605 182 3 16 chr2 26361587 26361723 -226894860 + AluJb SINE Alu 1 137 -175 2235 101 0 0 chr2 26361723 26362021 -226894562 + AluSq SINE Alu 1 298 -15 1605 182 3 16 chr2 26362021 26362192 -226894391 + AluJb SINE Alu 137 304 -8 1976 115 20 0 chr2 26362380 26362676 -226893907 + AluSx SINE Alu 1 302 -10 575 198 18 0 chr2 26362780 26362891 -226893692 + AluJo SINE Alu 120 232 -80 1043 156 0 98 chr2 26363015 26363084 -226893499 + AluJb SINE Alu 86 160 -152 1969 86 43 4 chr2 26363084 26363363 -226893220 + AluSc SINE Alu 1 290 -19 1043 156 0 98 chr2 26363363 26363537 -226893046 + AluJb SINE Alu 160 305 -7 258 77 51 0 chr2 26363728 26363767 -226892816 - HAL1 LINE L1 -1940 567 527 1305 81 0 6 chr2 26364429 26364603 -226891980 - AluSp SINE Alu -10 303 131 251 276 105 41 chr2 26364782 26364953 -226891630 + L1M4 LINE L1 2855 3014 -3132 1706 147 46 0 chr2 26364953 26365238 -226891345 + AluJb SINE Alu 1 298 -14 251 276 105 41 chr2 26365238 26365580 -226891003 + L1M4 LINE L1 3014 3401 -2745 1600 52 4 48 chr2 26365776 26366006 -226890577 - L1PB1 LINE L1 0 6151 5932 861 154 87 0 chr2 26366107 26366256 -226890327 + AluSc SINE Alu 124 285 -24 1476 196 0 61 chr2 26366901 26367052 -226889531 + AluJo SINE Alu 1 125 -187 1793 177 0 0 chr2 26367052 26367340 -226889243 + AluJb SINE Alu 8 295 -17 1476 196 0 61 chr2 26367340 26367499 -226889084 + AluJo SINE Alu 125 292 -20 1718 156 23 23 chr2 26367636 26367937 -226888646 + AluJb SINE Alu 1 301 -11 827 218 14 0 chr2 26368160 26368307 -226888276 + FAM SINE Alu 1 149 -36 29 70 0 0 chr2 26368312 26368369 -226888214 + AT_rich Low_complexity Low_complexity 1 57 0 603 156 0 55 chr2 26369244 26369353 -226887230 + FLAM_C SINE Alu 24 126 -17 331 219 62 27 chr2 26369790 26369936 -226886647 + L1ME4a LINE L1 5967 6117 -4 214 316 116 21 chr2 26371775 26371870 -226884713 - MIR SINE MIR -111 151 48 405 270 50 0 chr2 26371968 26372068 -226884515 + L2 LINE L2 3162 3266 -6 2346 112 0 6 chr2 26372688 26373001 -226883582 + AluSx SINE Alu 2 312 0 512 224 100 0 chr2 26374272 26374380 -226882203 - LTR16A1 LTR ERVL -19 438 305 2026 147 3 3 chr2 26374380 26374687 -226881896 + AluSx SINE Alu 1 307 -5 512 224 100 0 chr2 26374687 26374748 -226881835 - LTR16A1 LTR ERVL -151 306 252 279 191 181 29 chr2 26374996 26375101 -226881482 - L1ME LINE L1 -295 5826 5706 315 320 10 19 chr2 26375125 26375228 -226881355 + L1MC4a LINE L1 5844 5945 -1863 311 315 0 0 chr2 26375319 26375411 -226881172 + LTR67 LTR ERVL 117 208 -349 1729 85 0 22 chr2 26375590 26375814 -226880769 - AluSq SINE Alu -94 219 1 23 0 0 0 chr2 26375827 26375850 -226880733 + AT_rich Low_complexity Low_complexity 1 23 0 189 107 0 0 chr2 26375940 26375968 -226880615 + (TG)n Simple_repeat Simple_repeat 2 29 0 1173 299 13 4 chr2 26375986 26376361 -226880222 + LTR16A LTR ERVL 16 440 -10 332 215 108 32 chr2 26376364 26376457 -226880126 + HERVL LTR ERVL 1985 2084 -2912 370 307 106 5 chr2 26376483 26376672 -226879911 + HERVL LTR ERVL 2249 2456 -2540 763 299 79 29 chr2 26376685 26377066 -226879517 + HERVL LTR ERVL 3314 3713 -2051 2112 101 104 94 chr2 26377068 26377242 -226879341 + MSTA LTR MaLR 1 172 -256 2402 84 3 10 chr2 26377242 26377552 -226879031 + AluSx SINE Alu 1 308 -4 1301 62 0 0 chr2 26377560 26377720 -226878863 + L1PA7 LINE L1 5990 6149 -5 2112 101 104 94 chr2 26377720 26377960 -226878623 + MSTA LTR MaLR 178 428 0 1607 306 16 48 chr2 26377971 26378321 -226878262 + HERVL LTR ERVL 3682 4042 -1722 1697 138 0 71 chr2 26378321 26378421 -226878162 + AluJo SINE Alu 34 139 -173 2423 109 0 0 chr2 26378421 26378724 -226877859 - AluSg SINE Alu -7 303 1 1697 138 0 71 chr2 26378724 26378906 -226877677 + AluJo SINE Alu 139 296 -16 1607 306 16 48 chr2 26378906 26379404 -226877179 + HERVL LTR ERVL 4042 4533 -1231 2356 84 3 3 chr2 26379404 26379701 -226876882 - AluSq SINE Alu -16 297 1 270 0 0 0 chr2 26379713 26379743 -226876840 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 496 335 56 14 chr2 26380435 26380650 -226875933 + HERVL LTR ERVL 4851 5074 -690 1888 183 3 0 chr2 26380650 26380961 -226875622 + AluSx SINE Alu 1 312 0 1883 98 37 0 chr2 26381119 26381363 -226875220 + AluSq SINE Alu 1 253 -60 1096 275 63 13 chr2 26381704 26382006 -226874577 + LTR16A LTR ERVL 91 407 -43 421 97 0 0 chr2 26382124 26382186 -226874397 - Alu SINE Alu -11 300 239 246 188 104 0 chr2 26382322 26382370 -226874213 - MIR SINE MIR -107 101 49 2300 86 26 10 chr2 26382374 26382678 -226873905 - AluSx SINE Alu -3 309 1 1886 143 39 26 chr2 26382751 26383058 -226873525 + AluJb SINE Alu 1 311 -1 666 146 89 24 chr2 26383184 26383307 -226873276 + FLAM_C SINE Alu 13 143 0 1674 165 59 0 chr2 26383336 26383608 -226872975 + AluJo SINE Alu 1 288 -24 1044 196 0 0 chr2 26383610 26383789 -226872794 + AluJb SINE Alu 131 309 -3 2139 95 0 0 chr2 26383801 26384065 -226872518 + AluSx SINE Alu 1 264 -48 2444 66 7 0 chr2 26384141 26384429 -226872154 - AluSp SINE Alu -18 295 6 2098 95 3 69 chr2 26385286 26385603 -226870980 + AluSp SINE Alu 1 296 -17 1100 172 0 0 chr2 26385764 26385938 -226870645 - AluSg/x SINE Alu -4 306 133 1931 152 7 20 chr2 26386072 26386375 -226870208 - AluJo SINE Alu -13 299 1 2476 84 0 0 chr2 26386573 26386870 -226869713 + AluSq SINE Alu 1 297 -16 1148 148 25 10 chr2 26387123 26387319 -226869264 + AluSg/x SINE Alu 114 312 0 648 206 6 77 chr2 26387338 26387508 -226869075 + FRAM SINE Alu 8 165 -11 2060 117 0 11 chr2 26387558 26387881 -226868702 + AluSx SINE Alu 7 326 0 2229 115 3 16 chr2 26387997 26388133 -226868450 + AluSx SINE Alu 1 137 -175 2297 88 7 0 chr2 26388133 26388428 -226868155 + AluSg SINE Alu 1 297 -13 2229 115 3 16 chr2 26388428 26388595 -226867988 + AluSx SINE Alu 137 300 -12 2158 85 4 11 chr2 26388595 26388867 -226867716 + AluSq SINE Alu 1 270 -43 2420 72 7 0 chr2 26389024 26389316 -226867267 + AluY SINE Alu 1 294 -17 750 191 71 0 chr2 26389623 26389749 -226866834 - FRAM SINE Alu -25 151 17 979 170 6 22 chr2 26389792 26389974 -226866609 + AluJb SINE Alu 129 307 -5 1554 153 78 3 chr2 26389997 26390279 -226866304 + AluJo SINE Alu 1 303 -9 746 173 11 17 chr2 26390285 26390464 -226866119 + GA-rich Low_complexity Low_complexity 3 180 0 215 74 0 0 chr2 26390465 26390492 -226866091 + (GGGA)n Simple_repeat Simple_repeat 2 28 0 885 182 296 9 chr2 26390667 26391008 -226865575 + L1MC4 LINE L1 7604 8042 0 1204 189 130 11 chr2 26391016 26391286 -226865297 + AluJb SINE Alu 1 302 0 2065 108 0 4 chr2 26391415 26391683 -226864900 + AluSx SINE Alu 6 272 -40 1618 106 4 38 chr2 26391685 26391920 -226864663 - AluSx SINE Alu -84 228 2 2385 102 0 13 chr2 26391929 26392243 -226864340 - AluSq SINE Alu -3 310 1 195 210 321 12 chr2 26392323 26392404 -226864179 + MER5B DNA MER1_type 1 106 -72 261 180 0 0 chr2 26392616 26392666 -226863917 + A-rich Low_complexity Low_complexity 1 50 0 331 258 175 0 chr2 26393055 26393152 -226863431 + L2 LINE L2 3143 3256 -16 2275 80 3 33 chr2 26393731 26394033 -226862550 + AluY SINE Alu 1 293 -18 30 0 0 0 chr2 26394034 26394064 -226862519 + AT_rich Low_complexity Low_complexity 1 30 0 1329 98 14 115 chr2 26394156 26394237 -226862346 + L1MA1 LINE L1 6035 6123 -179 231 114 0 0 chr2 26394237 26394272 -226862311 + (TG)n Simple_repeat Simple_repeat 2 36 0 1329 98 14 115 chr2 26394272 26394285 -226862298 + L1MA1 LINE L1 6123 6136 -166 2315 89 7 0 chr2 26394285 26394567 -226862016 - AluSq SINE Alu -17 296 13 1329 98 14 115 chr2 26394567 26394708 -226861875 + L1MA1 LINE L1 6136 6240 -62 2084 139 0 0 chr2 26394708 26395003 -226861580 + AluSx SINE Alu 1 295 -17 1329 98 14 115 chr2 26395003 26395052 -226861531 + L1MA1 LINE L1 6240 6292 -10 42 15 0 44 chr2 26395052 26395089 -226861494 + AT_rich Low_complexity Low_complexity 1 38 -27 2454 72 0 0 chr2 26395089 26395381 -226861202 - AluY SINE Alu -19 292 1 2477 75 13 0 chr2 26395381 26395688 -226860895 - AluSx SINE Alu -1 311 1 42 15 0 44 chr2 26395688 26395717 -226860866 + AT_rich Low_complexity Low_complexity 36 65 0 581 257 90 0 chr2 26396352 26396496 -226860087 - MIR3 SINE MIR -7 201 45 386 297 173 17 chr2 26398837 26399035 -226857548 - MIR SINE MIR -10 252 27 245 167 0 21 chr2 26399128 26399176 -226857407 + MER57A LTR ERV1 291 337 -66 270 267 35 0 chr2 26399711 26399797 -226856786 + MER96 DNA MER1_type? 87 175 0 202 293 106 78 chr2 26399858 26400020 -226856563 + L2 LINE L2 2545 2701 -613 2177 126 0 0 chr2 26400020 26400322 -226856261 + AluSx SINE Alu 1 302 -10 202 293 106 78 chr2 26400322 26400490 -226856093 + L2 LINE L2 2701 2884 -430 965 81 8 0 chr2 26400516 26400639 -226855944 + AluSp SINE Alu 3 126 -187 188 135 27 0 chr2 26400745 26400782 -226855801 + A-rich Low_complexity Low_complexity 5 42 0 2551 86 0 3 chr2 26401262 26401615 -226854968 + AluSx SINE Alu 1 352 0 1693 236 107 14 chr2 26401615 26402165 -226854418 + L1ME3 LINE L1 5040 5692 -478 2092 177 19 11 chr2 26402165 26402527 -226854056 + MLT1A1 LTR MaLR 1 365 0 1693 236 107 14 chr2 26402527 26402757 -226853826 + L1ME3 LINE L1 5692 5899 -271 1067 79 0 0 chr2 26402773 26402899 -226853684 + AluSq/x SINE Alu 1 126 -187 192 40 0 0 chr2 26402899 26402924 -226853659 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 325 204 58 78 chr2 26402935 26403038 -226853545 + L1ME3 LINE L1 5872 5972 -190 458 276 161 52 chr2 26403603 26403820 -226852763 - L2 LINE L2 -10 3262 3005 2322 104 0 0 chr2 26403820 26404118 -226852465 + AluSg SINE Alu 1 298 -12 458 276 161 52 chr2 26404118 26404186 -226852397 - L2 LINE L2 -267 3005 2946 1942 116 49 0 chr2 26404233 26404517 -226852066 - AluSx SINE Alu -14 298 1 661 278 30 47 chr2 26404687 26404798 -226851785 + MIR SINE MIR 29 140 -122 2558 71 0 0 chr2 26404798 26405095 -226851488 + AluSp SINE Alu 1 297 -16 661 278 30 47 chr2 26405095 26405217 -226851366 + MIR SINE MIR 140 258 -4 2309 100 3 0 chr2 26405330 26405621 -226850962 - AluSq SINE Alu -15 298 7 2286 114 3 0 chr2 26405629 26405937 -226850646 - AluSq SINE Alu -4 309 1 2067 123 10 3 chr2 26406068 26406360 -226850223 + AluSx SINE Alu 1 294 -18 962 173 24 12 chr2 26406575 26406743 -226849840 - AluJo SINE Alu -98 214 45 215 227 0 0 chr2 26406743 26406787 -226849796 + L2 LINE L2 3262 3305 -8 583 316 106 56 chr2 26406856 26407251 -226849332 - L3 LINE CR1 -104 1473 1059 1632 178 43 33 chr2 26407427 26407533 -226849050 + AluJo SINE Alu 1 104 -208 2383 84 0 3 chr2 26407533 26407830 -226848753 + AluY SINE Alu 1 296 -15 1632 178 43 33 chr2 26407830 26408026 -226848557 + AluJo SINE Alu 104 306 -6 695 281 50 46 chr2 26408046 26408349 -226848234 + L1ME LINE L1 5375 5678 -484 2192 114 3 16 chr2 26408545 26408860 -226847723 + AluSx SINE Alu 1 311 -1 276 0 0 0 chr2 26408887 26408919 -226847664 - L1MA1 LINE L1 -58 6244 6213 2454 89 0 0 chr2 26409054 26409356 -226847227 - AluSq SINE Alu -11 302 1 2032 134 14 0 chr2 26409568 26409860 -226846723 + AluSg SINE Alu 1 296 -14 2005 132 0 4 chr2 26409966 26410239 -226846344 - AluSx SINE Alu -40 272 1 25 40 0 20 chr2 26410249 26410268 -226846315 + AT_rich Low_complexity Low_complexity 1 19 -30 2196 107 3 10 chr2 26410268 26410567 -226846016 - AluSq SINE Alu -16 297 1 25 40 0 20 chr2 26410567 26410597 -226845986 + AT_rich Low_complexity Low_complexity 19 49 0 924 141 0 0 chr2 26410649 26410784 -226845799 + FLAM_C SINE Alu 1 135 -8 325 167 0 0 chr2 26410902 26410956 -226845627 - Charlie5 DNA MER1_type -2550 62 9 973 200 0 0 chr2 26411070 26411235 -226845348 - FRAM SINE Alu -12 164 1 1786 163 24 3 chr2 26411300 26411595 -226844988 + AluJo SINE Alu 1 301 -11 350 282 77 17 chr2 26411917 26412034 -226844549 + L2 LINE L2 3189 3312 -1 2331 103 0 10 chr2 26412177 26412488 -226844095 + AluSx SINE Alu 1 308 -4 2351 101 7 0 chr2 26412542 26412849 -226843734 + AluSq SINE Alu 1 309 -4 2035 133 3 36 chr2 26413272 26413574 -226843009 + AluJo SINE Alu 1 292 -20 714 143 0 0 chr2 26413593 26413698 -226842885 + U6 snRNA snRNA 1 105 -2 1555 211 28 11 chr2 26413703 26414063 -226842520 + L1MB3 LINE L1 5315 5680 -500 247 146 21 21 chr2 26414063 26414111 -226842472 + Alu SINE Alu 1 48 -251 1335 179 4 17 chr2 26414216 26414451 -226842132 + AluJb SINE Alu 72 303 -9 2209 182 65 0 chr2 26414451 26414895 -226841688 + L1MB3 LINE L1 5670 6142 -41 1207 138 46 63 chr2 26414894 26415193 -226841390 + L1MB2 LINE L1 5890 6148 -23 * 297 255 137 57 chr2 26415431 26415555 -226841028 - MIR3 SINE MIR 0 208 53 2173 124 0 0 chr2 26415555 26415853 -226840730 - AluSq SINE Alu -15 298 1 297 255 137 57 chr2 26415853 26415910 -226840673 - MIR3 SINE MIR -155 53 2 406 329 110 58 chr2 26416259 26416551 -226840032 + L2 LINE L2 2957 3263 -9 1947 105 0 0 chr2 26416620 26416868 -226839715 - AluSx SINE Alu -64 248 1 222 265 213 52 chr2 26417189 26417251 -226839332 + MER5B DNA MER1_type 1 52 -126 753 220 0 0 chr2 26417251 26417383 -226839200 + FLAM_A SINE Alu 1 132 -1 222 265 213 52 chr2 26417383 26417456 -226839127 + MER5B DNA MER1_type 52 158 -20 182 258 136 15 chr2 26417492 26417558 -226839025 - MIR SINE MIR -105 157 84 265 349 110 0 chr2 26417609 26417718 -226838865 + L2 LINE L2 3118 3238 -34 1874 181 10 0 chr2 26417783 26418092 -226838491 + AluJb SINE Alu 1 312 0 1146 119 12 0 chr2 26418932 26419092 -226837491 + AluSg/x SINE Alu 137 298 -14 2411 85 10 0 chr2 26419498 26419805 -226836778 - AluSp SINE Alu -3 310 1 391 41 107 8 chr2 26419870 26419991 -226836592 + (TA)n Simple_repeat Simple_repeat 2 134 0 309 195 51 93 chr2 26419992 26420110 -226836473 - L1MCa LINE L1 -4362 2064 1952 2197 139 0 0 chr2 26420577 26420880 -226835703 + AluSx SINE Alu 1 303 -9 377 169 28 42 chr2 26420882 26420953 -226835630 - L1MCa LINE L1 -4362 2064 1995 525 55 0 0 chr2 26420953 26421026 -226835557 + (GA)n Simple_repeat Simple_repeat 2 74 0 1446 187 4 26 chr2 26421035 26421303 -226835280 - AluJb SINE Alu -50 262 1 285 159 125 45 chr2 26421303 26421391 -226835192 - L1MC5 LINE L1 -414 7547 7453 2082 152 0 0 chr2 26421437 26421734 -226834849 + AluJb SINE Alu 1 297 -15 763 332 50 4 chr2 26421757 26422037 -226834546 + L3 LINE CR1 834 1126 -451 2175 129 0 0 chr2 26422359 26422654 -226833929 + AluSx SINE Alu 1 295 -17 1555 134 110 7 chr2 26422733 26423155 -226833428 + LTR54 LTR ERV1 4 495 -3 2262 117 0 0 chr2 26423313 26423613 -226832970 - AluSc SINE Alu -9 300 1 1697 182 14 7 chr2 26423613 26423899 -226832684 - AluJo SINE Alu -23 289 2 624 274 48 12 chr2 26423929 26424097 -226832486 - MIR SINE MIR -50 212 39 320 307 10 30 chr2 26425108 26425209 -226831374 + MIR SINE MIR 4 102 -160 515 253 27 16 chr2 26425215 26425401 -226831182 - L1MC5 LINE L1 -35 7926 7739 2333 98 3 0 chr2 26425402 26425697 -226830886 - AluSx SINE Alu -12 300 5 2017 154 3 3 chr2 26425720 26426032 -226830551 - AluJb SINE Alu 0 312 1 331 255 123 0 chr2 26426036 26426142 -226830441 + MIR SINE MIR 104 222 -40 1088 103 18 36 chr2 26426177 26426193 -226830390 + AluSg/x SINE Alu 120 135 -181 1847 163 3 7 chr2 26426193 26426482 -226830101 + AluJo SINE Alu 3 290 -22 1088 103 18 36 chr2 26426482 26426665 -226829918 + AluSg/x SINE Alu 135 316 0 498 186 47 31 chr2 26427064 26427193 -226829390 - LTR67 LTR ERVL 0 557 427 1162 120 0 0 chr2 26427414 26427572 -226829011 + AluSg/x SINE Alu 153 310 0 1428 100 0 25 chr2 26427713 26427732 -226828851 - AluSg/x SINE Alu -1 311 293 1218 82 0 6 chr2 26427732 26427902 -226828681 - L1MA1 LINE L1 0 6302 6134 1428 100 0 25 chr2 26427902 26428082 -226828501 - AluSg/x SINE Alu -19 293 117 1076 152 0 0 chr2 26428182 26428333 -226828250 - AluJb SINE Alu -24 288 138 2372 92 3 3 chr2 26428613 26428919 -226827664 - AluSp SINE Alu -7 306 1 2382 68 0 0 chr2 26429248 26429569 -226827014 - AluY SINE Alu 0 321 1 320 59 20 0 chr2 26429573 26429624 -226826959 + (TTTA)n Simple_repeat Simple_repeat 2 53 0 2414 82 0 3 chr2 26430216 26430509 -226826074 - AluSc SINE Alu -17 292 1 1719 179 0 10 chr2 26430511 26430807 -226825776 - AluJb SINE Alu -19 293 1 2184 126 7 0 chr2 26430816 26431117 -226825466 - AluSx SINE Alu -9 303 1 339 257 76 38 chr2 26431489 26431594 -226824989 + MIR3 SINE MIR 57 165 -43 2027 169 0 0 chr2 26431607 26431909 -226824674 + AluJb SINE Alu 5 306 -6 657 164 0 10 chr2 26431918 26432022 -226824561 + AluSq/x SINE Alu 2 104 -209 2018 133 7 3 chr2 26432086 26432379 -226824204 + AluSx SINE Alu 1 294 -18 598 132 97 14 chr2 26432502 26432646 -226823937 - L1MA4 LINE L1 -3 6297 6142 2195 117 0 7 chr2 26432701 26432992 -226823591 - AluSc SINE Alu -20 289 1 769 214 83 0 chr2 26433004 26433172 -226823411 + AluJo SINE Alu 115 296 -16 715 174 16 0 chr2 26433186 26433307 -226823276 - FLAM_A SINE Alu -10 123 1 2261 100 17 0 chr2 26433555 26433844 -226822739 + AluSx SINE Alu 1 294 -18 2282 101 13 0 chr2 26434344 26434651 -226821932 + AluSq SINE Alu 3 313 0 327 104 0 0 chr2 26434694 26434742 -226821841 + (A)n Simple_repeat Simple_repeat 1 48 0 2046 104 11 14 chr2 26436830 26437117 -226819466 - AluSx SINE Alu -25 287 2 933 256 91 21 chr2 26437117 26437503 -226819080 - L1M4 LINE L1 -3371 2775 2363 1853 146 3 61 chr2 26437651 26437979 -226818604 - AluJb SINE Alu -3 309 1 320 320 64 19 chr2 26438444 26438600 -226817983 + MIR SINE MIR 65 227 -35 355 272 37 63 chr2 26438872 26439063 -226817520 - L1ME1 LINE L1 -46 6120 5935 234 0 0 0 chr2 26439075 26439101 -226817482 + (T)n Simple_repeat Simple_repeat 1 26 0 934 85 30 12 chr2 26439203 26439367 -226817216 + (TTTC)n Simple_repeat Simple_repeat 2 168 0 2442 81 0 31 chr2 26439375 26439782 -226816801 - AluY SINE Alu 0 397 1 2232 130 0 0 chr2 26439785 26440093 -226816490 - AluSx SINE Alu -4 308 1 749 158 23 17 chr2 26440115 26440292 -226816291 + CT-rich Low_complexity Low_complexity 1 178 0 2078 120 40 0 chr2 26440306 26440605 -226815978 - AluSp SINE Alu -1 312 2 883 175 44 38 chr2 26440611 26440794 -226815789 - AluJo SINE Alu -6 306 123 2163 145 0 0 chr2 26441163 26441466 -226815117 + AluSx SINE Alu 1 303 -9 186 230 32 143 chr2 26441667 26441793 -226814790 + MIR SINE MIR 36 147 -61 329 294 0 68 chr2 26442010 26442156 -226814427 - MIR SINE MIR -50 212 77 2137 107 21 3 chr2 26442180 26442470 -226814113 - AluSx SINE Alu -17 295 1 300 281 12 24 chr2 26442651 26442733 -226813850 - L2 LINE L2 -546 2768 2688 259 246 29 0 chr2 26442734 26442803 -226813780 + CT-rich Low_complexity Low_complexity 6 76 0 222 324 73 0 chr2 26443508 26443576 -226813007 + L2 LINE L2 3231 3303 -10 200 35 35 0 chr2 26443580 26443609 -226812974 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 27 29 0 0 chr2 26444640 26444674 -226811909 + AT_rich Low_complexity Low_complexity 1 34 0 2211 122 0 0 chr2 26444723 26445019 -226811564 + AluSq SINE Alu 1 296 -17 2366 89 0 0 chr2 26445020 26445313 -226811270 + AluSc SINE Alu 1 293 -16 321 26 0 0 chr2 26445332 26445370 -226811213 + (TAA)n Simple_repeat Simple_repeat 1 38 0 1447 164 116 40 chr2 26445375 26445650 -226810933 + AluJb SINE Alu 1 296 -16 1597 106 0 14 chr2 26445765 26445982 -226810601 + AluSg SINE Alu 1 214 -96 2288 132 0 0 chr2 26446018 26446328 -226810255 + AluSg SINE Alu 1 310 0 919 150 0 0 chr2 26446379 26446512 -226810071 + FLAM_C SINE Alu 1 133 0 231 362 21 11 chr2 26446669 26446763 -226809820 + MIR SINE MIR 19 113 -149 721 245 70 10 chr2 26446763 26446963 -226809620 - MLT1K LTR MaLR 0 588 377 2366 82 0 26 chr2 26446985 26447288 -226809295 - AluY SINE Alu -16 295 1 2433 99 0 6 chr2 26447291 26447604 -226808979 - AluSq SINE Alu -2 311 1 409 318 161 0 chr2 26447605 26447828 -226808755 - MLT1K LTR MaLR -320 268 10 2161 135 0 0 chr2 26448164 26448460 -226808123 + AluSx SINE Alu 1 296 -16 794 179 0 0 chr2 26448512 26448629 -226807954 + FLAM_C SINE Alu 2 118 -15 381 22 0 0 chr2 26448631 26448677 -226807906 + (TG)n Simple_repeat Simple_repeat 1 46 0 2096 111 4 7 chr2 26448677 26448957 -226807626 - AluSx SINE Alu -33 279 1 183 385 33 0 chr2 26449167 26449258 -226807325 + L2 LINE L2 3168 3261 -11 749 180 16 0 chr2 26449282 26449404 -226807179 + FLAM_A SINE Alu 1 124 -9 2094 133 0 3 chr2 26449424 26449758 -226806825 + AluSx SINE Alu 1 333 0 405 262 148 0 chr2 26450397 26450519 -226806064 + MER91C DNA MER1_type 1 140 0 2236 209 86 36 chr2 26450797 26451139 -226805444 + L1ME3A LINE L1 5456 5779 -391 2303 100 3 0 chr2 26451139 26451430 -226805153 + AluSq SINE Alu 5 296 -17 2306 97 7 0 chr2 26451431 26451740 -226804843 + AluY SINE Alu 1 311 0 2236 209 86 36 chr2 26451740 26451761 -226804822 + L1ME3A LINE L1 5779 5797 -373 2332 100 3 13 chr2 26451761 26452072 -226804511 + AluSp SINE Alu 1 308 -5 2236 209 86 36 chr2 26452072 26452378 -226804205 + L1ME3A LINE L1 5797 6162 -8 646 252 61 49 chr2 26452372 26452618 -226803965 + L1MEc LINE L1 8 256 -6140 * 398 248 39 78 chr2 26452631 26452656 -226803927 + L1MEc LINE L1 390 414 -5982 1463 164 118 8 chr2 26452656 26452918 -226803665 - AluSg1 SINE Alu -18 291 1 398 248 39 78 chr2 26452918 26453098 -226803485 + L1MEc LINE L1 414 587 -5809 455 241 70 82 chr2 26453354 26453512 -226803071 + L2 LINE L2 3158 3313 0 2268 101 0 31 chr2 26454216 26454533 -226802050 + AluSg SINE Alu 1 307 -3 1368 74 0 0 chr2 26455140 26455302 -226801281 + AluY SINE Alu 1 162 -149 719 290 65 0 chr2 26455600 26455845 -226800738 + AluSx SINE Alu 50 310 -2 1100 165 6 0 chr2 26455991 26456161 -226800422 - FRAM SINE Alu -13 163 1 795 164 138 13 chr2 26457000 26457152 -226799431 - AluJb SINE Alu -16 296 126 2243 114 7 0 chr2 26457636 26457925 -226798658 - AluSx SINE Alu -17 295 5 587 302 33 6 chr2 26458365 26458547 -226798036 - MIR SINE MIR -56 206 20 287 324 63 9 chr2 26458898 26459009 -226797574 + MIR SINE MIR 35 151 -111 1756 155 0 63 chr2 26459048 26459391 -226797192 + AluJb SINE Alu 1 324 0 287 300 33 8 chr2 26460097 26460217 -226796366 - MIR3 SINE MIR -5 203 81 2499 89 0 0 chr2 26460344 26460647 -226795936 - AluSx SINE Alu -9 303 1 211 189 0 0 chr2 26460674 26460711 -226795872 - MIR SINE MIR -87 121 85 739 30 10 30 chr2 26460917 26461018 -226795565 + L1PB1 LINE L1 6053 6151 0 357 246 96 32 chr2 26461031 26461159 -226795424 - HAL1b LINE L1 -2 6104 1238 2120 141 10 0 chr2 26461242 26461539 -226795044 - AluSx SINE Alu -12 300 1 514 282 85 77 chr2 26461704 26461909 -226794674 + MIR SINE MIR 2 211 -51 2336 113 3 0 chr2 26461909 26462219 -226794364 + AluSq SINE Alu 1 311 -2 514 282 85 77 chr2 26462219 26462272 -226794311 + MIR SINE MIR 211 262 0 2104 108 0 49 chr2 26462367 26462514 -226794069 + AluSc SINE Alu 1 154 -155 2555 70 0 0 chr2 26462514 26462815 -226793768 + AluY SINE Alu 1 301 -10 2104 108 0 49 chr2 26462815 26462991 -226793592 + AluSc SINE Alu 154 308 -1 1609 180 0 59 chr2 26463225 26463548 -226793035 - AluJo SINE Alu -6 306 3 292 285 32 8 chr2 26464352 26464475 -226792108 + CT-rich Low_complexity Low_complexity 2 127 0 301 336 100 0 chr2 26464638 26464748 -226791835 - L3 LINE CR1 -25 1552 1432 493 171 0 122 chr2 26464751 26464795 -226791788 - L1MA10 LINE L1 -13 6321 6273 2404 103 0 0 chr2 26464795 26465095 -226791488 + AluSx SINE Alu 1 300 -12 493 171 0 122 chr2 26465095 26465173 -226791410 - L1MA10 LINE L1 -61 6273 6214 181 292 67 56 chr2 26465176 26465265 -226791318 - L3 LINE CR1 -162 1415 1326 434 266 77 14 chr2 26465520 26465580 -226791003 - MIR SINE MIR 0 262 207 2426 87 0 6 chr2 26465580 26465891 -226790692 - AluSc SINE Alu 0 309 1 972 135 0 0 chr2 26465891 26466024 -226790559 - AluJo/FLAM SINE Alu -169 133 1 434 266 77 14 chr2 26466024 26466105 -226790478 - MIR SINE MIR -54 208 111 2367 101 3 0 chr2 26466268 26466564 -226790019 + AluSp SINE Alu 1 297 -16 2035 140 0 3 chr2 26466682 26466974 -226789609 - AluJb SINE Alu -10 302 12 706 299 65 13 chr2 26467071 26467200 -226789383 + MIR SINE MIR 20 141 -121 2397 92 0 0 chr2 26467200 26467503 -226789080 + AluY SINE Alu 1 303 -8 706 299 65 13 chr2 26467503 26467604 -226788979 + MIR SINE MIR 141 262 0 2117 110 10 3 chr2 26468100 26468390 -226788193 + AluSq SINE Alu 1 292 -21 199 239 56 42 chr2 26469672 26469743 -226786840 - MIR SINE MIR -59 149 78 531 246 46 56 chr2 26469773 26469968 -226786615 + MIR SINE MIR 20 212 -50 506 293 42 31 chr2 26471055 26471246 -226785337 - MIR3 SINE MIR -12 196 4 338 268 71 27 chr2 26471362 26471474 -226785109 + MIR SINE MIR 30 146 -62 246 136 0 0 chr2 26472685 26472729 -226783854 + (CCA)n Simple_repeat Simple_repeat 2 45 0 206 269 0 0 chr2 26474045 26474097 -226782486 + (CCG)n Simple_repeat Simple_repeat 1 52 0 208 230 0 27 chr2 26474193 26474267 -226782316 + G-rich Low_complexity Low_complexity 3 74 0 384 256 41 123 chr2 26475133 26475352 -226781231 + MIR SINE MIR 11 211 -51 2110 112 0 0 chr2 26476194 26476488 -226780095 + AluSc SINE Alu 1 294 -15 255 288 0 14 chr2 26476490 26476563 -226780020 + MIR SINE MIR 82 153 -109 900 174 6 6 chr2 26476569 26476730 -226779853 + FRAM SINE Alu 1 157 -19 251 342 47 13 chr2 26476859 26477008 -226779575 + L2 LINE L2 2816 2969 -303 1491 166 10 71 chr2 26477031 26477207 -226779376 - AluJo SINE Alu -23 289 139 2093 87 33 3 chr2 26477207 26477506 -226779077 + AluSg SINE Alu 1 308 -2 1491 166 10 71 chr2 26477506 26477637 -226778946 - AluJo SINE Alu -173 139 1 519 159 11 0 chr2 26477710 26477798 -226778785 + AluJ/FLAM SINE Alu 2 90 -222 192 339 0 0 chr2 26477827 26477886 -226778697 + L2 LINE L2 1851 1909 -1405 815 284 107 84 chr2 26477890 26478359 -226778224 + L2 LINE L2 2172 2629 -643 1902 129 6 58 chr2 26478359 26478684 -226777899 + AluSq SINE Alu 1 308 -5 815 284 107 84 chr2 26478684 26478708 -226777875 + L2 LINE L2 2629 2651 -621 1585 176 13 20 chr2 26478708 26479009 -226777574 + AluJo SINE Alu 1 299 -13 815 284 107 84 chr2 26479009 26479023 -226777560 + L2 LINE L2 2651 2663 -609 2090 114 0 10 chr2 26479023 26479330 -226777253 + AluSx SINE Alu 1 304 -8 815 284 107 84 chr2 26479330 26479371 -226777212 + L2 LINE L2 2663 2702 -570 2203 84 7 3 chr2 26479371 26479668 -226776915 + AluSc SINE Alu 1 298 -11 815 284 107 84 chr2 26479668 26479690 -226776893 + L2 LINE L2 2702 2722 -550 1972 130 0 3 chr2 26479690 26479983 -226776600 - AluSc SINE Alu -17 292 1 815 284 107 84 chr2 26479983 26480493 -226776090 + L2 LINE L2 2722 3271 -1 784 159 0 8 chr2 26480569 26480695 -226775888 + AluJb SINE Alu 2 126 -186 1751 164 3 0 chr2 26480921 26481214 -226775369 + AluJb SINE Alu 3 296 -16 22 80 0 0 chr2 26481231 26481281 -226775302 + AT_rich Low_complexity Low_complexity 1 50 0 2314 76 0 17 chr2 26481303 26481604 -226774979 - AluSp SINE Alu -17 296 1 396 0 0 0 chr2 26481636 26481680 -226774903 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 1985 97 49 3 chr2 26481691 26481979 -226774604 + AluSq SINE Alu 1 301 -12 343 304 48 30 chr2 26482063 26482231 -226774352 - MIR SINE MIR -50 212 42 1809 138 0 3 chr2 26482402 26482705 -226773878 + AluSx SINE Alu 1 302 0 830 181 0 0 chr2 26482882 26483015 -226773568 + FLAM_C SINE Alu 1 133 0 1997 94 44 10 chr2 26483020 26483317 -226773266 + AluSx SINE Alu 1 307 -5 1088 278 59 45 chr2 26484082 26484395 -226772188 + L2 LINE L2 2464 2771 -542 2254 109 0 3 chr2 26484395 26484707 -226771876 + AluSx SINE Alu 1 311 -1 1088 278 59 45 chr2 26484707 26485174 -226771409 + L2 LINE L2 2771 3264 -49 2122 106 0 3 chr2 26485174 26485475 -226771108 + AluSc SINE Alu 1 300 -9 1088 278 59 45 chr2 26485475 26485526 -226771057 + L2 LINE L2 3264 3313 0 1773 158 16 22 chr2 26485561 26485872 -226770711 - AluJb SINE Alu -3 309 1 2250 81 3 0 chr2 26485910 26486208 -226770375 - AluSp SINE Alu -14 299 1 1127 132 6 0 chr2 26487001 26487168 -226769415 - AluSp SINE Alu -27 286 119 2582 33 0 0 chr2 26487323 26487623 -226768960 - AluY SINE Alu -11 300 1 545 151 23 0 chr2 26487834 26487920 -226768663 - FLAM_C SINE Alu -19 124 37 24 32 0 0 chr2 26487934 26487965 -226768618 + AT_rich Low_complexity Low_complexity 1 31 0 2415 79 0 0 chr2 26488127 26488431 -226768152 + AluSp SINE Alu 1 304 -9 774 144 0 8 chr2 26488683 26488801 -226767782 - FLAM_C SINE Alu -25 118 2 4654 176 65 57 chr2 26488974 26489488 -226767095 - L1MD2 LINE L1 0 6359 5851 2016 104 0 21 chr2 26489488 26489806 -226766777 - AluSx SINE Alu 0 312 1 2129 101 0 26 chr2 26489808 26490116 -226766467 - AluSx SINE Alu -12 300 1 4654 176 65 57 chr2 26490116 26490691 -226765892 - L1MD2 LINE L1 -508 5851 5266 1416 168 95 4 chr2 26490691 26490965 -226765618 + AluJb SINE Alu 1 299 -13 4654 176 65 57 chr2 26490965 26491332 -226765251 - L1MD2 LINE L1 -1093 5266 4903 2076 104 37 0 chr2 26491483 26491782 -226764801 - AluSq SINE Alu -3 310 1 1383 234 122 54 chr2 26491914 26492597 -226763986 - HAL1 LINE L1 -443 2064 1336 458 259 53 159 chr2 26492608 26492729 -226763854 - HAL1 LINE L1 -1344 1163 1031 1164 210 126 8 chr2 26492729 26492991 -226763592 - AluJb SINE Alu -9 293 1 1688 145 3 68 chr2 26492996 26493320 -226763263 - AluJb SINE Alu -8 304 2 458 259 53 159 chr2 26493320 26493550 -226763033 - HAL1 LINE L1 -1480 1027 774 2051 90 0 30 chr2 26493550 26493850 -226762733 + AluSc SINE Alu 1 291 -18 2330 70 0 3 chr2 26493860 26494160 -226762423 + AluSg SINE Alu 1 299 -11 458 259 53 159 chr2 26494160 26494185 -226762398 - HAL1 LINE L1 -1742 765 739 1548 178 0 27 chr2 26494185 26494478 -226762105 + AluJo SINE Alu 6 290 -22 458 259 53 159 chr2 26494478 26494916 -226761667 - HAL1 LINE L1 -1768 739 419 2016 94 56 3 chr2 26495800 26496086 -226760497 - AluSg SINE Alu -9 301 1 207 182 0 0 chr2 26496086 26496119 -226760464 + T-rich Low_complexity Low_complexity 5 37 0 2261 91 0 19 chr2 26496120 26496438 -226760145 - AluSx SINE Alu 0 312 1 1009 96 0 0 chr2 26496438 26496574 -226760009 - AluSq/x SINE Alu -176 136 1 392 222 46 9 chr2 26496747 26496855 -226759728 - L1MC4 LINE L1 -3 8039 7928 1014 171 0 0 chr2 26496913 26497077 -226759506 + AluJb SINE Alu 131 294 -18 267 333 32 24 chr2 26497159 26497285 -226759298 - L2 LINE L2 -3 3269 3143 1056 134 6 34 chr2 26497435 26497476 -226759107 - AluSx SINE Alu -138 174 133 1943 128 14 3 chr2 26497476 26497773 -226758810 - AluSx SINE Alu -12 300 1 1056 134 6 34 chr2 26497773 26497910 -226758673 - AluSx SINE Alu -179 133 1 1878 149 17 0 chr2 26497979 26498275 -226758308 - AluJo SINE Alu -11 301 1 2146 114 0 0 chr2 26498275 26498581 -226758002 - AluSc SINE Alu -3 306 1 1563 184 24 3 chr2 26498718 26499006 -226757577 - AluJo SINE Alu -18 294 1 320 295 181 31 chr2 26499144 26499367 -226757216 - L2 LINE L2 -896 2418 2129 958 157 48 6 chr2 26499367 26499533 -226757050 + FAM SINE Alu 1 173 -2 320 295 181 31 chr2 26499533 26499634 -226756949 - L2 LINE L2 -1185 2129 2045 183 42 0 0 chr2 26499701 26499725 -226756858 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 1798 134 0 3 chr2 26499725 26500008 -226756575 - AluSx SINE Alu -30 282 1 210 277 170 7 chr2 26500012 26500153 -226756430 + MIR SINE MIR 94 257 -5 937 269 87 42 chr2 26500156 26500491 -226756092 + L2 LINE L2 2440 2789 -525 697 203 0 30 chr2 26500505 26500638 -226755945 - FLAM_A SINE Alu -5 137 9 911 250 115 44 chr2 26500724 26501108 -226755475 + L2 LINE L2 2889 3299 -14 188 234 0 21 chr2 26501179 26501226 -226755357 + MIR SINE MIR 210 255 -7 244 211 333 26 chr2 26501361 26501475 -226755108 - L2 LINE L2 0 3313 3165 1031 167 28 3 chr2 26501624 26501825 -226754758 + L1MB2 LINE L1 5551 5758 -413 791 109 67 124 chr2 26501820 26502030 -226754553 + L1MB2 LINE L1 5971 6168 -3 * 603 246 19 119 chr2 26502275 26502355 -226754228 - MIR SINE MIR -15 247 161 2264 63 14 0 chr2 26502355 26502672 -226753911 - AluY SINE Alu 0 311 1 603 246 19 119 chr2 26502672 26502859 -226753724 - MIR SINE MIR -101 161 7 1756 146 0 34 chr2 26503178 26503501 -226753082 - AluJb SINE Alu 0 312 1 1013 233 111 30 chr2 26503504 26503775 -226752808 - AluJo SINE Alu -9 293 1 759 187 193 0 chr2 26503851 26504022 -226752561 - AluJb SINE Alu -22 290 87 21 36 0 0 chr2 26504239 26504267 -226752316 + AT_rich Low_complexity Low_complexity 1 28 0 1934 138 0 10 chr2 26504481 26504805 -226751778 + AluSx SINE Alu 2 312 0 2110 123 0 0 chr2 26504917 26505217 -226751366 + AluSq SINE Alu 1 300 -13 1136 242 184 37 chr2 26505386 26505888 -226750695 - L1MC4 LINE L1 0 8042 7421 1465 135 0 32 chr2 26505888 26506140 -226750443 - AluSx SINE Alu -22 290 47 1136 242 184 37 chr2 26506140 26506289 -226750294 - L1MC4 LINE L1 -621 7421 7295 1356 150 32 80 chr2 26506418 26506731 -226749852 - AluJb SINE Alu -14 298 1 1442 158 0 50 chr2 26506849 26507146 -226749437 + AluJo SINE Alu 1 282 -30 201 147 0 0 chr2 26507290 26507324 -226749259 + (A)n Simple_repeat Simple_repeat 1 34 0 25 0 0 0 chr2 26507431 26507456 -226749127 + AT_rich Low_complexity Low_complexity 1 25 0 351 196 9 89 chr2 26507523 26507635 -226748948 + MER114 LTR ERV 546 648 0 2197 109 106 0 chr2 26508519 26508858 -226747725 - THE1C LTR MaLR 0 375 1 2182 107 3 0 chr2 26508862 26509161 -226747422 - AluSx SINE Alu -7 305 6 882 146 0 0 chr2 26509164 26509301 -226747282 - AluJo SINE Alu -175 137 1 286 270 158 67 chr2 26510131 26510505 -226746078 - L2 LINE L2 -241 3072 2661 341 248 124 0 chr2 26510683 26510788 -226745795 + MIR3 SINE MIR 37 154 -54 1943 102 43 33 chr2 26511483 26511786 -226744797 + AluSg SINE Alu 1 306 -4 1942 137 0 3 chr2 26511798 26512091 -226744492 - AluSx SINE Alu -20 292 1 211 289 186 0 chr2 26512645 26512742 -226743841 - MIR SINE MIR -100 162 48 2448 186 146 19 chr2 26512913 26513490 -226743093 + Charlie1a DNA MER1_type 1 652 -799 2182 101 0 3 chr2 26513490 26513787 -226742796 + AluSx SINE Alu 1 296 -16 825 188 0 0 chr2 26513824 26513973 -226742610 + FRAM SINE Alu 20 168 -8 2475 170 100 106 chr2 26513977 26514221 -226742362 + Charlie1a DNA MER1_type 650 894 -1867 2037 109 3 0 chr2 26514221 26514504 -226742079 + AluSc SINE Alu 1 284 -25 210 37 0 0 chr2 26514511 26514538 -226742045 + (TAA)n Simple_repeat Simple_repeat 3 29 0 2475 170 100 106 chr2 26514538 26515096 -226741487 + Charlie1a DNA MER1_type 900 1455 0 452 288 40 17 chr2 26515587 26515751 -226740832 - LTR33A LTR ERVL -361 185 24 2226 107 0 13 chr2 26516486 26516803 -226739780 - AluSq SINE Alu 0 313 1 700 203 222 24 chr2 26516829 26517036 -226739547 + MIR SINE MIR 8 255 -7 533 237 147 30 chr2 26518175 26518407 -226738176 - MIR SINE MIR -2 260 2 2249 74 30 0 chr2 26518746 26519045 -226737538 + AluSq SINE Alu 1 308 -5 2083 137 0 0 chr2 26519782 26520082 -226736501 + AluY SINE Alu 1 300 -11 2201 221 65 0 chr2 26520102 26520623 -226735960 + L1M4 LINE L1 4310 4864 -1282 321 256 236 20 chr2 26520668 26520922 -226735661 + L1MEc LINE L1 1237 1545 -4851 3108 198 78 74 chr2 26520922 26520992 -226735591 + L1MC4a LINE L1 6240 6308 -1500 1904 158 11 0 chr2 26520992 26521277 -226735306 + AluSx SINE Alu 1 288 -24 3108 198 78 74 chr2 26521277 26521395 -226735188 + L1MC4a LINE L1 6308 6424 -1384 368 70 0 18 chr2 26521395 26521452 -226735131 + (CA)n Simple_repeat Simple_repeat 2 57 0 3108 198 78 74 chr2 26521452 26521744 -226734839 + L1MC4a LINE L1 6424 6713 -1095 2000 137 27 0 chr2 26521744 26522044 -226734539 - AluJo SINE Alu -4 308 1 3108 198 78 74 chr2 26522044 26522526 -226734057 + L1MC4a LINE L1 6713 7208 -600 303 179 0 0 chr2 26522577 26522633 -226733950 + L1MD3 LINE L1 7599 7654 -341 962 147 125 85 chr2 26522641 26522865 -226733718 - AluJo SINE Alu -60 252 20 1950 190 82 74 chr2 26522894 26523016 -226733567 + L1MD3 LINE L1 7405 7524 -471 2452 107 42 20 chr2 26523016 26523370 -226733213 + THE1B LTR MaLR 1 362 -2 1950 190 82 74 chr2 26523370 26523831 -226732752 + L1MD3 LINE L1 7524 7993 -2 1470 226 63 52 chr2 26523863 26524403 -226732180 + L1MEc LINE L1 1531 2076 -4320 1113 169 111 43 chr2 26524399 26524678 -226731905 + L1MEc LINE L1 2357 2654 -3561 * 1850 237 152 30 chr2 26524675 26525447 -226731136 + L1MEc LINE L1 3535 4400 -1815 212 156 0 89 chr2 26525471 26525561 -226731022 + C-rich Low_complexity Low_complexity 5 86 0 978 146 0 7 chr2 26525574 26525725 -226730858 - AluSg/x SINE Alu -38 272 123 1128 145 0 6 chr2 26525728 26525900 -226730683 - AluSx SINE Alu -138 174 4 796 190 42 14 chr2 26525903 26526119 -226730464 + L1MEc LINE L1 4388 4609 -1606 720 274 85 0 chr2 26526121 26526322 -226730261 + L2 LINE L2 2864 3081 -232 258 171 85 49 chr2 26527209 26527291 -226729292 + L1MEc LINE L1 5189 5273 -942 2150 120 3 3 chr2 26527291 26527591 -226728992 + AluSx SINE Alu 1 300 -12 612 144 0 0 chr2 26527610 26527707 -226728876 + MER50 LTR ERV1 508 604 -130 308 219 37 12 chr2 26527717 26527799 -226728784 + L1MEc LINE L1 5262 5345 -870 2340 96 7 7 chr2 26527799 26528102 -226728481 + AluSp SINE Alu 1 303 -10 1597 137 122 11 chr2 26528117 26528379 -226728204 + AluSq SINE Alu 1 291 -22 3384 180 60 62 chr2 26528379 26529223 -226727360 + L1MB5 LINE L1 5323 6165 -9 356 307 200 9 chr2 26529244 26529459 -226727124 + MIR SINE MIR 7 262 0 235 274 0 32 chr2 26529459 26529506 -226727077 + (CTG)n Simple_repeat Simple_repeat 2 48 -13 2198 96 4 0 chr2 26529506 26529786 -226726797 - AluSq SINE Alu -32 281 1 235 274 0 32 chr2 26529786 26529800 -226726783 + (CTG)n Simple_repeat Simple_repeat 48 61 0 404 209 76 9 chr2 26529810 26529915 -226726668 + MIR SINE MIR 125 236 -26 254 292 67 11 chr2 26529995 26530084 -226726499 - MIR SINE MIR -70 138 45 2033 88 0 39 chr2 26530722 26531007 -226725576 - AluSg SINE Alu -36 274 1 2282 105 7 0 chr2 26531227 26531523 -226725060 + AluSx SINE Alu 1 298 -14 390 240 127 75 chr2 26531903 26532170 -226724413 - HAL1 LINE L1 -379 2128 1848 901 268 175 2 chr2 26532230 26532681 -226723902 - HAL1 LINE L1 -789 1718 1190 1786 170 0 23 chr2 26532736 26533042 -226723541 + AluSx SINE Alu 1 299 -13 247 315 18 64 chr2 26533476 26533695 -226722888 - L2 LINE L2 -353 2961 2753 963 251 212 40 chr2 26533697 26533974 -226722609 - L2 LINE L2 -1004 2310 2082 2170 135 0 0 chr2 26533974 26534278 -226722305 + AluSx SINE Alu 1 304 -8 963 251 212 40 chr2 26534278 26534346 -226722237 - L2 LINE L2 -1232 2082 2027 549 0 0 0 chr2 26534346 26534407 -226722176 + (TG)n Simple_repeat Simple_repeat 2 62 0 963 251 212 40 chr2 26534407 26534559 -226722024 - L2 LINE L2 -1287 2027 1726 1745 177 23 16 chr2 26535963 26536273 -226720310 - AluJb SINE Alu 0 312 1 184 79 79 0 chr2 26536303 26536341 -226720242 + (CATTT)n Simple_repeat Simple_repeat 2 42 0 2260 108 0 0 chr2 26536341 26536636 -226719947 - AluSq SINE Alu -18 295 1 2111 121 0 0 chr2 26536654 26536943 -226719640 - AluSx SINE Alu -23 289 1 344 279 48 0 chr2 26537051 26537155 -226719428 - L1MEd LINE L1 -5406 713 605 362 265 103 101 chr2 26537208 26537410 -226719173 - L1MEd LINE L1 -5680 439 239 2450 71 0 0 chr2 26537410 26537704 -226718879 + AluY SINE Alu 1 294 -17 1776 171 7 3 chr2 26537713 26538017 -226718566 + AluJb SINE Alu 1 305 -7 362 265 103 101 chr2 26538017 26538231 -226718352 - L1MEd LINE L1 -5887 232 12 477 104 0 0 chr2 26538471 26538548 -226718035 + (TGGA)n Simple_repeat Simple_repeat 1 77 0 1697 206 105 75 chr2 26538814 26539024 -226717559 - L1M4 LINE L1 -3128 3018 2816 1804 149 27 7 chr2 26539024 26539319 -226717264 + AluJb SINE Alu 1 301 -11 1697 206 105 75 chr2 26539319 26539358 -226717225 - L1M4 LINE L1 -3330 2816 2780 2252 99 0 13 chr2 26539358 26539661 -226716922 - AluSx SINE Alu -12 300 2 1697 206 105 75 chr2 26539661 26540047 -226716536 - L1M4 LINE L1 -3366 2780 2363 1816 146 3 61 chr2 26540163 26540523 -226716060 - AluJb SINE Alu 0 341 1 366 310 65 13 chr2 26540988 26541143 -226715440 + MIR SINE MIR 65 227 -35 771 197 43 64 chr2 26541373 26541606 -226714977 - L1ME1 LINE L1 -5 6161 5934 2483 74 0 7 chr2 26541617 26541926 -226714657 - AluY SINE Alu -4 307 1 450 276 97 25 chr2 26542964 26543160 -226713423 - L2 LINE L2 -96 3217 3008 356 276 95 9 chr2 26543183 26543299 -226713284 - L2 LINE L2 -2 3311 3186 374 258 208 6 chr2 26544252 26544430 -226712153 + L2 LINE L2 3100 3313 0 2538 74 0 0 chr2 26544513 26544822 -226711761 - AluY SINE Alu -2 309 1 246 281 104 21 chr2 26545175 26545271 -226711312 - MIR SINE MIR -138 124 21 206 254 0 79 chr2 26545280 26545343 -226711240 + L2 LINE L2 3215 3272 0 4516 162 46 26 chr2 26545663 26546822 -226709761 - L1MB8 LINE L1 0 6178 4995 2441 70 0 0 chr2 26546822 26547121 -226709462 - AluY SINE Alu -12 299 1 4516 162 46 26 chr2 26547121 26547240 -226709343 - L1MB8 LINE L1 -1183 4995 4880 299 200 53 13 chr2 26547243 26547318 -226709265 - L2 LINE L2 -566 2748 2671 534 287 84 45 chr2 26547349 26547453 -226709130 - L2 LINE L2 -1225 2089 1990 2071 117 50 13 chr2 26547453 26547752 -226708831 + AluSx SINE Alu 1 310 -2 534 287 84 45 chr2 26547752 26547792 -226708791 - L2 LINE L2 -1324 1990 1953 1829 196 20 12 chr2 26547792 26548134 -226708449 + MER7A DNA MER2_type 1 343 -3 534 287 84 45 chr2 26548134 26548298 -226708285 - L2 LINE L2 -1361 1953 1768 2208 206 47 58 chr2 26548304 26548688 -226707895 + L1MD2 LINE L1 4614 5001 -1358 2170 122 3 0 chr2 26548688 26548984 -226707599 + AluSx SINE Alu 1 297 -15 2208 206 47 58 chr2 26548984 26549048 -226707535 + L1MD2 LINE L1 5001 5064 -1295 2315 113 0 0 chr2 26549048 26549350 -226707233 + AluSx SINE Alu 1 302 -10 2208 206 47 58 chr2 26549350 26549598 -226706985 + L1MD2 LINE L1 5064 5313 -1046 2304 97 0 13 chr2 26549598 26549907 -226706676 + AluSq SINE Alu 1 305 -8 2208 206 47 58 chr2 26549907 26550893 -226705690 + L1MD2 LINE L1 5313 6349 -10 2025 128 7 0 chr2 26550964 26551294 -226705289 - AluSx SINE Alu 0 332 1 333 185 93 9 chr2 26551296 26551404 -226705179 - L2 LINE L2 -1604 1710 1594 21 36 0 0 chr2 26551599 26551627 -226704956 + AT_rich Low_complexity Low_complexity 1 28 0 2205 119 0 3 chr2 26552139 26552441 -226704142 + AluSx SINE Alu 1 301 -11 2002 164 0 10 chr2 26552780 26553090 -226703493 - AluSx SINE Alu -5 307 1 26 0 0 0 chr2 26553367 26553393 -226703190 + AT_rich Low_complexity Low_complexity 1 26 0 2435 67 3 7 chr2 26553407 26553706 -226702877 + AluSp SINE Alu 1 298 -15 2048 260 31 40 chr2 26553843 26554490 -226702093 - MER21B LTR ERV1 -125 738 98 1040 177 0 0 chr2 26554704 26554862 -226701721 + FRAM SINE Alu 4 161 -15 2118 121 3 13 chr2 26554883 26555189 -226701394 + AluSq SINE Alu 1 303 -10 4613 209 63 41 chr2 26555209 26555375 -226701208 + L1MB7 LINE L1 3776 3937 -2209 2244 103 0 3 chr2 26555375 26555666 -226700917 + AluSx SINE Alu 1 290 -22 4613 209 63 41 chr2 26555666 26556693 -226699890 + L1MB7 LINE L1 3937 5000 -1146 1925 149 9 44 chr2 26556693 26557009 -226699574 + AluJb SINE Alu 1 305 -7 4613 209 63 41 chr2 26557009 26557060 -226699523 + L1MB7 LINE L1 5000 5048 -1098 267 221 13 26 chr2 26557061 26557138 -226699445 + L1MB7 LINE L1 5129 5204 -942 3402 167 50 31 chr2 26557138 26557855 -226698728 + L1MB7 LINE L1 5454 6184 0 294 150 0 0 chr2 26557889 26557929 -226698654 + Tigger2 DNA MER2_type 1 40 -2678 2135 99 0 30 chr2 26557945 26558247 -226698336 - AluSg SINE Alu -13 297 5 24 0 0 0 chr2 26558256 26558280 -226698303 + AT_rich Low_complexity Low_complexity 1 24 0 652 240 0 8 chr2 26558280 26558401 -226698182 - FLAM_A SINE Alu -13 120 1 622 200 38 81 chr2 26558402 26558605 -226697978 - MER8 DNA MER2_type -33 206 12 2552 68 0 0 chr2 26558633 26558940 -226697643 - AluY SINE Alu -4 307 1 424 139 0 38 chr2 26558940 26559019 -226697564 - FLAM_C SINE Alu 0 143 68 2400 63 0 25 chr2 26559417 26559734 -226696849 + AluY SINE Alu 3 311 0 2235 92 3 3 chr2 26560062 26560354 -226696229 - AluSg SINE Alu -18 292 1 543 153 24 0 chr2 26560408 26560493 -226696090 - AluJb SINE Alu -22 290 204 323 220 94 29 chr2 26560708 26560845 -226695738 + MER20 DNA MER1_type 3 219 0 1725 161 27 34 chr2 26561209 26561507 -226695076 + AluJo SINE Alu 1 296 -16 1577 194 27 3 chr2 26561609 26561902 -226694681 - AluJo SINE Alu -11 301 2 2407 86 0 3 chr2 26562673 26562974 -226693609 - AluY SINE Alu -11 300 1 2066 140 0 0 chr2 26563001 26563294 -226693289 - AluSx SINE Alu -17 295 3 14449 129 95 22 chr2 26563410 26563440 -226693143 + Tigger2 DNA MER2_type 26 52 -2666 784 173 0 16 chr2 26563440 26563567 -226693016 - FLAM_A SINE Alu -8 125 1 14449 129 95 22 chr2 26563567 26564431 -226692152 + Tigger2 DNA MER2_type 52 852 -1866 2574 47 7 0 chr2 26564431 26564731 -226691852 + AluY SINE Alu 1 302 -9 14449 129 95 22 chr2 26564731 26566346 -226690237 + Tigger2 DNA MER2_type 852 2718 0 968 185 0 5 chr2 26566440 26566663 -226689920 - AluJo SINE Alu 0 344 123 4858 186 59 12 chr2 26566669 26567519 -226689064 - L1MB3 LINE L1 0 6183 5375 1712 156 7 21 chr2 26567519 26567801 -226688782 - AluJb SINE Alu -3 309 32 4858 186 59 12 chr2 26567801 26568380 -226688203 - L1MB3 LINE L1 -808 5375 4676 1772 133 3 53 chr2 26568380 26568682 -226687901 + AluSx SINE Alu 1 287 -25 4858 186 59 12 chr2 26568682 26568765 -226687818 - L1MB3 LINE L1 -1507 4676 4598 2134 160 9 0 chr2 26570156 26570487 -226686096 - MER1B DNA MER1_type 0 339 6 2355 94 3 0 chr2 26571075 26571382 -226685201 + AluSc SINE Alu 1 308 -1 25 31 0 0 chr2 26571452 26571484 -226685099 + AT_rich Low_complexity Low_complexity 1 32 0 602 236 115 0 chr2 26572394 26572551 -226684032 - FAM SINE Alu 0 175 1 1013 205 120 27 chr2 26572563 26572822 -226683761 - AluJo SINE Alu -18 294 12 1134 113 148 15 chr2 26573256 26573459 -226683124 + MER30 DNA MER1_type 1 230 0 335 275 146 87 chr2 26573620 26573907 -226682676 - L1MC4a LINE L1 -1634 6174 5871 841 270 69 73 chr2 26573928 26574343 -226682240 - L1MC4a LINE L1 -1992 5816 5402 2107 97 3 0 chr2 26574343 26574631 -226681952 - AluSq SINE Alu -18 295 7 841 270 69 73 chr2 26574631 26574738 -226681845 - L1MC4a LINE L1 -2406 5402 5296 33 0 0 0 chr2 26575246 26575279 -226681304 + AT_rich Low_complexity Low_complexity 1 33 0 1053 216 80 31 chr2 26575367 26575691 -226680892 + L1ME3 LINE L1 5822 6161 -1 2245 103 0 0 chr2 26575746 26576058 -226680525 - AluSx SINE Alu 0 312 1 344 233 120 8 chr2 26576059 26576192 -226680391 - L1ME4a LINE L1 -6 6115 5968 1573 161 4 7 chr2 26576227 26576501 -226680082 - AluJo SINE Alu -39 273 1 2371 55 0 22 chr2 26579925 26580237 -226676346 + AluY SINE Alu 1 305 -6 2341 67 10 0 chr2 26580242 26580541 -226676042 + AluSx SINE Alu 1 302 -10 2427 87 0 0 chr2 26580795 26581106 -226675477 + AluSx SINE Alu 2 312 0 303 277 0 0 chr2 26581694 26581759 -226674824 - MIR SINE MIR -152 110 46 2396 64 6 3 chr2 26582540 26582852 -226673731 - AluSp SINE Alu 0 313 1 2244 83 0 3 chr2 26582868 26583169 -226673414 - AluSc SINE Alu -9 300 1 1562 206 125 91 chr2 26583516 26584205 -226672378 + L1MC5 LINE L1 6731 7442 -519 1931 122 0 7 chr2 26584365 26584653 -226671930 - AluSx SINE Alu -26 286 1 1588 175 0 45 chr2 26584793 26585101 -226671482 + AluJb SINE Alu 1 294 -18 601 273 172 60 chr2 26585244 26585628 -226670955 - LTR67 LTR ERVL -129 428 2 193 208 146 0 chr2 26585633 26585681 -226670902 + MER5B DNA MER1_type 1 55 -123 644 218 8 0 chr2 26585696 26585820 -226670763 + FLAM_C SINE Alu 7 131 -12 250 243 184 19 chr2 26585823 26585926 -226670657 - MER5B DNA MER1_type -55 123 4 328 278 28 28 chr2 26585944 26586052 -226670531 + MER5A DNA MER1_type 9 116 -73 196 331 86 36 chr2 26586230 26586369 -226670214 + L2 LINE L2 3122 3267 -5 2045 112 23 0 chr2 26586505 26586808 -226669775 + AluSx SINE Alu 3 312 0 2193 104 0 0 chr2 26586812 26587109 -226669474 + AluSg SINE Alu 1 297 -13 353 297 104 91 chr2 26587456 26588069 -226668514 + HAL1 LINE L1 45 665 -1842 1025 160 11 0 chr2 26588226 26588407 -226668176 + AluSc SINE Alu 127 309 0 502 260 114 62 chr2 26588471 26588698 -226667885 + HAL1 LINE L1 874 1112 -1395 2074 116 0 38 chr2 26588699 26589018 -226667565 + AluSx SINE Alu 1 307 -5 603 86 0 0 chr2 26589018 26589099 -226667484 + MSTD LTR MaLR 316 396 0 448 247 107 27 chr2 26589149 26589299 -226667284 + HAL1 LINE L1 1611 1772 -735 398 240 39 10 chr2 26589483 26589587 -226666996 + L2 LINE L2 3201 3307 -6 1498 188 18 3 chr2 26589587 26589869 -226666714 + AluJo SINE Alu 1 286 -26 243 0 0 0 chr2 26589869 26589875 -226666708 + (TG)n Simple_repeat Simple_repeat 1 33 0 243 0 0 0 chr2 26589875 26589902 -226666681 + (TG)n Simple_repeat Simple_repeat 2 28 0 228 226 89 97 chr2 26590002 26590126 -226666457 + L1MEd LINE L1 25 147 -5972 2056 94 0 4 chr2 26590245 26590521 -226666062 - AluSx SINE Alu -17 295 21 1004 261 35 32 chr2 26590521 26590831 -226665752 + L2 LINE L2 3002 3312 -1 207 0 0 0 chr2 26590989 26591012 -226665571 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 780 179 21 0 chr2 26591044 26591184 -226665399 + AluJb SINE Alu 2 144 -168 2079 99 26 10 chr2 26591838 26592141 -226664442 - AluSg SINE Alu -2 308 1 1979 140 0 6 chr2 26592850 26593164 -226663419 - AluSx SINE Alu 0 312 1 21 57 0 0 chr2 26593177 26593212 -226663371 + AT_rich Low_complexity Low_complexity 1 35 0 766 97 0 0 chr2 26593212 26593315 -226663268 - AluSg/x SINE Alu -14 296 194 2153 111 0 0 chr2 26593370 26593668 -226662915 + AluSx SINE Alu 1 298 -14 1156 145 0 0 chr2 26593671 26593843 -226662740 + AluJo/FRAM SINE Alu 129 300 -12 11673 172 30 28 chr2 26594046 26595265 -226661318 + L1MB1 LINE L1 2737 3952 -2216 2262 99 7 3 chr2 26595265 26595569 -226661014 + AluSx SINE Alu 1 305 -7 11673 172 30 28 chr2 26595569 26597520 -226659063 + L1MB1 LINE L1 3952 5916 -252 2237 108 3 0 chr2 26597520 26597827 -226658756 + AluSq SINE Alu 1 308 -5 11673 172 30 28 chr2 26597827 26598047 -226658536 + L1MB1 LINE L1 5916 6134 -34 1544 127 42 81 chr2 26598047 26598354 -226658229 + AluJo SINE Alu 1 295 -17 1927 117 7 0 chr2 26598403 26598717 -226657866 - AluSq SINE Alu 0 316 1 4315 146 28 79 chr2 26598741 26598981 -226657602 + L1MB5 LINE L1 5272 5523 -651 2266 67 3 3 chr2 26598981 26599280 -226657303 + AluY SINE Alu 1 299 -12 4315 146 28 79 chr2 26599280 26599909 -226656674 + L1MB5 LINE L1 5523 6092 -82 1926 150 0 16 chr2 26599909 26600222 -226656361 - AluJo SINE Alu -4 308 1 4315 146 28 79 chr2 26600222 26600302 -226656281 + L1MB5 LINE L1 6092 6174 0 1597 118 18 109 chr2 26600352 26600683 -226655900 - MER50 LTR ERV1 -1 733 433 1313 131 13 42 chr2 26600677 26600798 -226655785 - MER50 LTR ERV1 -505 229 117 * 2197 95 0 25 chr2 26600798 26601113 -226655470 + AluSx SINE Alu 1 307 -5 1313 131 13 42 chr2 26601113 26601227 -226655356 - MER50 LTR ERV1 -617 117 1 2144 125 0 0 chr2 26601254 26601566 -226655017 + AluSx SINE Alu 1 312 0 1670 83 8 43 chr2 26601828 26602082 -226654501 + AluSx SINE Alu 51 295 -17 1462 201 3 15 chr2 26602311 26602640 -226653943 - L1M4 LINE L1 -1033 5113 4789 2475 55 7 0 chr2 26602776 26603085 -226653498 - AluY SINE Alu 0 311 1 1767 100 130 0 chr2 26603231 26603492 -226653091 - AluSx SINE Alu -17 295 1 1948 113 44 0 chr2 26603571 26603864 -226652719 + AluSx SINE Alu 1 306 -6 2154 111 0 0 chr2 26605182 26605488 -226651095 + AluSx SINE Alu 2 307 -5 732 189 8 0 chr2 26606023 26606150 -226650433 + FLAM_A SINE Alu 2 129 -4 21 36 0 0 chr2 26606150 26606178 -226650405 + AT_rich Low_complexity Low_complexity 1 28 0 1574 167 36 16 chr2 26607022 26607328 -226649255 - AluJo SINE Alu 0 312 1 1897 189 27 30 chr2 26607363 26607611 -226648972 + MER63B DNA MER1_type 1 249 -813 918 172 12 0 chr2 26607611 26607774 -226648809 + FRAM SINE Alu 1 165 -1 1897 189 27 30 chr2 26607774 26607926 -226648657 + MER63B DNA MER1_type 249 400 -36 1983 130 7 0 chr2 26607940 26608240 -226648343 - AluSx SINE Alu -10 302 1 1893 138 10 0 chr2 26608550 26608848 -226647735 - AluJb SINE Alu -11 301 1 2404 87 0 3 chr2 26608855 26609167 -226647416 - AluSq SINE Alu -2 311 1 388 181 58 106 chr2 26609198 26609386 -226647197 + L1MC5 LINE L1 7206 7384 -577 329 167 76 0 chr2 26609393 26609459 -226647124 + MER63B DNA MER1_type 327 397 -38 233 178 0 0 chr2 26609460 26609505 -226647078 + L1MC5 LINE L1 7395 7439 -522 2020 130 0 13 chr2 26609517 26609818 -226646765 - AluSx SINE Alu -10 302 6 523 186 124 0 chr2 26609894 26610007 -226646576 + FLAM_A SINE Alu 1 127 -6 570 165 148 9 chr2 26610053 26610168 -226646415 + AluJo/FLAM SINE Alu 3 133 -179 1955 111 47 3 chr2 26610170 26610468 -226646115 + AluSx SINE Alu 1 311 -1 490 170 28 0 chr2 26610471 26610577 -226646006 + L1MB8 LINE L1 6064 6172 -6 261 119 0 51 chr2 26610582 26610641 -226645942 + Alu SINE Alu 247 302 0 244 291 57 51 chr2 26610660 26610818 -226645765 + L1MC5 LINE L1 7778 7936 -25 1793 131 4 0 chr2 26611120 26611388 -226645195 - AluJb SINE Alu -16 296 28 2111 80 0 100 chr2 26612586 26612925 -226643658 - AluSx SINE Alu -7 305 1 420 307 7 7 chr2 26613145 26613295 -226643288 + MIR3 SINE MIR 34 183 -25 1283 76 4 143 chr2 26613439 26613677 -226642906 + AluSx SINE Alu 48 252 -60 2011 120 0 7 chr2 26613918 26614227 -226642356 + AluSx SINE Alu 1 307 -5 242 250 208 0 chr2 26614467 26614563 -226642020 + MIR SINE MIR 34 149 -113 469 187 0 101 chr2 26614836 26615034 -226641549 + G-rich Low_complexity Low_complexity 1 178 0 184 80 0 93 chr2 26615069 26615144 -226641439 + (CGGGGG)n Simple_repeat Simple_repeat 2 69 0 38 101 0 0 chr2 26615171 26615300 -226641283 + GC_rich Low_complexity Low_complexity 1 129 0 202 270 0 27 chr2 26615691 26615765 -226640818 + C-rich Low_complexity Low_complexity 2 73 0 240 35 0 0 chr2 26617160 26617189 -226639394 + (CA)n Simple_repeat Simple_repeat 1 29 0 399 276 26 0 chr2 26619194 26619310 -226637273 - MIR3 SINE MIR -52 156 38 374 338 93 0 chr2 26619434 26619585 -226636998 - MIR SINE MIR -12 250 86 735 171 16 0 chr2 26619599 26619728 -226636855 - FLAM_C SINE Alu -2 131 1 1713 113 35 0 chr2 26619755 26620011 -226636572 - AluSq SINE Alu -48 265 1 1043 183 30 104 chr2 26620377 26620705 -226635878 + AluJo SINE Alu 9 312 0 200 189 0 0 chr2 26620960 26620997 -226635586 + G-rich Low_complexity Low_complexity 3 39 0 634 236 28 7 chr2 26621401 26621545 -226635038 - MIR SINE MIR -114 148 2 256 246 0 14 chr2 26621994 26622063 -226634520 + G-rich Low_complexity Low_complexity 5 72 0 2021 109 3 3 chr2 26622697 26623001 -226633582 - AluSx SINE Alu 0 304 1 284 281 94 31 chr2 26623216 26623376 -226633207 + L2 LINE L2 2715 2884 -430 319 310 140 29 chr2 26623560 26623731 -226632852 + L2 LINE L2 3124 3313 0 1885 132 11 0 chr2 26623782 26624069 -226632514 + AluJo SINE Alu 1 290 -22 322 232 160 8 chr2 26624559 26624684 -226631899 - MIR3 SINE MIR -12 196 53 1689 138 14 7 chr2 26625530 26625829 -226630754 + AluJo SINE Alu 5 305 0 185 330 223 0 chr2 26626062 26626174 -226630409 - MIR SINE MIR -74 188 52 36 82 0 0 chr2 26626466 26626551 -226630032 + GC_rich Low_complexity Low_complexity 1 85 0 228 189 0 40 chr2 26627048 26627122 -226629461 + (CCCG)n Simple_repeat Simple_repeat 4 74 0 24 32 0 0 chr2 26627178 26627209 -226629374 + GC_rich Low_complexity Low_complexity 1 31 0 387 113 50 75 chr2 26627727 26627807 -226628776 - MER103 DNA DNA -42 124 47 2049 111 3 13 chr2 26628778 26629084 -226627499 + AluSx SINE Alu 1 303 -9 183 162 0 0 chr2 26629752 26629789 -226626794 + CT-rich Low_complexity Low_complexity 2 38 0 509 27 147 0 chr2 26634242 26634317 -226622266 + L1PA7 LINE L1 6069 6154 0 1525 97 202 0 chr2 26634589 26634846 -226621737 + AluJb SINE Alu 1 309 -3 803 188 0 0 chr2 26635379 26635512 -226621071 - FLAM_A SINE Alu 0 133 1 879 175 40 11 chr2 26637823 26638000 -226618583 + MER5A DNA MER1_type 1 182 -7 229 248 67 60 chr2 26637867 26638016 -226618567 - MER5A DNA MER1_type -31 158 9 * 340 302 135 10 chr2 26638133 26638325 -226618258 - MIR SINE MIR -13 249 34 567 179 50 25 chr2 26638474 26638615 -226617968 - L1ME2 LINE L1 -9 6155 6033 457 194 107 10 chr2 26638615 26638718 -226617865 - MER81 DNA DNA -1 113 1 567 179 50 25 chr2 26638718 26638731 -226617852 - L1ME2 LINE L1 -131 6033 6022 719 109 0 0 chr2 26640454 26640555 -226616028 - AluSg/x SINE Alu -6 303 203 633 284 71 76 chr2 26640556 26640855 -226615728 + L3 LINE CR1 637 935 -642 1534 173 0 65 chr2 26640855 26640981 -226615602 + AluJo SINE Alu 5 138 -174 2068 110 0 10 chr2 26640981 26641280 -226615303 - AluSg SINE Alu -14 296 1 1534 173 0 65 chr2 26641280 26641476 -226615107 + AluJo SINE Alu 138 306 -6 633 284 71 76 chr2 26641476 26641556 -226615027 + L3 LINE CR1 935 1014 -563 593 212 18 0 chr2 26641647 26641760 -226614823 + MLT1H LTR MaLR 81 195 -354 26 30 0 0 chr2 26641787 26641820 -226614763 + AT_rich Low_complexity Low_complexity 1 33 0 254 196 22 0 chr2 26642031 26642077 -226614506 + MLT1G1 LTR MaLR 479 525 -70 198 103 0 0 chr2 26642220 26642249 -226614334 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2149 105 0 3 chr2 26642820 26643116 -226613467 - AluSg SINE Alu -15 295 1 247 276 245 36 chr2 26643445 26643641 -226612942 - MIR SINE MIR -6 256 20 2211 81 0 23 chr2 26643873 26644183 -226612400 - AluSg1 SINE Alu -6 303 1 1856 157 7 0 chr2 26644543 26644837 -226611746 + AluSx SINE Alu 1 296 -16 23 0 0 0 chr2 26646400 26646423 -226610160 + AT_rich Low_complexity Low_complexity 1 23 0 1573 155 10 27 chr2 26646668 26646965 -226609618 - AluJo SINE Alu -13 299 8 223 268 14 14 chr2 26646992 26647063 -226609520 + L2 LINE L2 2589 2659 -655 186 322 42 56 chr2 26647173 26647316 -226609267 + L2 LINE L2 3169 3309 -4 231 241 146 36 chr2 26647552 26647622 -226608961 + L1MC/D LINE L1 5100 5161 -985 1582 133 72 29 chr2 26647622 26647901 -226608682 + AluSg SINE Alu 1 291 -19 231 241 146 36 chr2 26647901 26648104 -226608479 + L1MC/D LINE L1 5161 5403 -743 861 128 0 0 chr2 26648104 26648221 -226608362 + FLAM_C SINE Alu 2 118 -15 255 278 192 45 chr2 26648241 26648311 -226608272 + L1MC/D LINE L1 5380 5438 -2370 2222 109 0 0 chr2 26648311 26648613 -226607970 - AluSq SINE Alu -11 302 1 255 278 192 45 chr2 26648613 26648876 -226607707 + L1MC/D LINE L1 5438 5762 -2046 1560 211 0 0 chr2 26649000 26649294 -226607289 + AluJo SINE Alu 1 294 -18 1301 130 19 10 chr2 26651111 26651318 -226605265 - MER20 DNA MER1_type -8 211 3 572 296 12 12 chr2 26652257 26652426 -226604157 - MIR3 SINE MIR -3 205 37 2278 68 3 0 chr2 26652436 26652728 -226603855 - AluY SINE Alu -18 293 1 261 241 60 24 chr2 26652889 26652972 -226603611 + MIR SINE MIR 124 209 -53 256 280 101 42 chr2 26653150 26653339 -226603244 - MER112 DNA MER1_type -1 259 60 1716 161 94 0 chr2 26653442 26653771 -226602812 + MER46B DNA MER2_type 1 235 -1 1867 164 0 13 chr2 26654159 26654471 -226602112 - AluJo SINE Alu -4 308 1 571 158 123 35 chr2 26658093 26658207 -226598376 + FLAM_C SINE Alu 10 133 -10 2171 116 0 0 chr2 26658402 26658703 -226597880 - AluSx SINE Alu -9 303 3 418 306 27 27 chr2 26658818 26659004 -226597579 + L1MEc LINE L1 318 503 -5893 * 495 272 26 5 chr2 26658986 26659177 -226597406 + L1MEc LINE L1 820 1014 -5382 479 143 88 11 chr2 26659187 26659278 -226597305 + FLAM_A SINE Alu 29 126 -16 1956 251 84 46 chr2 26659285 26659703 -226596880 + L1MEc LINE L1 1068 1468 -4928 1766 160 13 32 chr2 26659703 26660015 -226596568 + AluJo SINE Alu 1 306 -6 1956 251 84 46 chr2 26660015 26660112 -226596471 + L1MEc LINE L1 1468 1560 -4836 1859 141 37 0 chr2 26660112 26660410 -226596173 + AluSq SINE Alu 1 309 -4 1956 251 84 46 chr2 26660410 26660811 -226595772 + L1MEc LINE L1 1560 1944 -4452 2149 119 7 0 chr2 26660811 26661121 -226595462 + AluSx SINE Alu 1 312 0 1956 251 84 46 chr2 26661121 26661224 -226595359 + L1MEc LINE L1 1944 2042 -4354 2045 105 7 0 chr2 26661224 26661510 -226595073 - AluY SINE Alu -23 288 1 1956 251 84 46 chr2 26661510 26661576 -226595007 + L1MEc LINE L1 2042 2198 -4198 9122 191 46 11 chr2 26661578 26664072 -226592511 + ERVL-C1 LTR ERVL 1337 3972 -1792 2277 122 31 36 chr2 26664072 26664464 -226592119 + MLT1B LTR MaLR 1 390 0 9122 191 46 11 chr2 26664464 26664728 -226591855 + ERVL-C1 LTR ERVL 3972 4225 -1539 4410 195 32 20 chr2 26664746 26665597 -226590986 + ERVL-C1 LTR ERVL 4461 5321 -443 2192 194 92 49 chr2 26665603 26665824 -226590759 + MER76 LTR ERV 103 313 -375 2203 114 0 0 chr2 26665824 26666130 -226590453 - AluSx SINE Alu -6 306 1 2192 194 92 49 chr2 26666130 26666460 -226590123 + MER76 LTR ERV 313 678 -10 1476 181 135 3 chr2 26666498 26666846 -226589737 + ERVL-C1 LTR ERVL 5362 5755 -9 493 178 69 0 chr2 26666862 26666963 -226589620 + MLT2C1 LTR ERVL 17 124 -273 795 255 76 19 chr2 26666972 26667286 -226589297 + L1MEc LINE L1 3352 3683 -2532 457 113 0 36 chr2 26667286 26667507 -226589076 + AluSc SINE Alu 1 305 -4 4676 233 86 12 chr2 26667509 26668887 -226587696 + L1MEc LINE L1 3691 5192 -1023 1574 189 107 42 chr2 26668855 26669313 -226587270 + L1ME1 LINE L1 5023 5538 -697 * 2081 128 0 0 chr2 26669313 26669618 -226586965 + AluSx SINE Alu 1 305 -7 1574 189 107 42 chr2 26669618 26669777 -226586806 + L1ME1 LINE L1 5538 5685 -550 580 179 0 68 chr2 26669781 26669898 -226586685 + FLAM_A SINE Alu 11 119 -23 1147 171 9 23 chr2 26669898 26670115 -226586468 - AluJo SINE Alu -11 301 88 1410 198 24 49 chr2 26670123 26670219 -226586364 + L1ME1 LINE L1 5653 5750 -485 2153 115 0 0 chr2 26670219 26670514 -226586069 - AluSx SINE Alu -17 295 1 1410 198 24 49 chr2 26670514 26670746 -226585837 + L1ME1 LINE L1 5750 5973 -262 1476 179 13 47 chr2 26670762 26671063 -226585520 - AluJo SINE Alu -21 291 1 286 188 75 25 chr2 26671063 26671143 -226585440 + L1ME1 LINE L1 6121 6204 -31 1294 228 11 4 chr2 26671143 26671415 -226585168 + AluJo SINE Alu 3 276 -36 234 0 0 0 chr2 26671432 26671458 -226585125 + (CA)n Simple_repeat Simple_repeat 1 26 0 1916 121 17 7 chr2 26671916 26672206 -226584377 - AluSx SINE Alu -19 293 1 1995 124 11 7 chr2 26672721 26673004 -226583579 + AluSq SINE Alu 1 304 0 181 0 0 0 chr2 26673004 26673024 -226583559 + (TAAAA)n Simple_repeat Simple_repeat 2 180 0 3243 176 48 59 chr2 26673826 26674570 -226582013 - L1MB5 LINE L1 -76 6098 5363 443 143 199 93 chr2 26674601 26674762 -226581821 - AluSp SINE Alu -21 292 115 252 111 0 0 chr2 26675007 26675052 -226581531 + (TG)n Simple_repeat Simple_repeat 1 45 0 261 230 96 111 chr2 26675299 26675434 -226581149 - MIR3 SINE MIR -44 164 32 202 277 24 60 chr2 26675803 26675886 -226580697 + L3 LINE CR1 1429 1508 -69 405 188 141 74 chr2 26675981 26676081 -226580502 - MER58C DNA MER1_type -2205 215 100 2299 77 16 19 chr2 26676081 26676392 -226580191 - AluSq SINE Alu -3 310 1 405 188 141 74 chr2 26676392 26676440 -226580143 - MER58C DNA MER1_type -2320 100 57 186 167 0 0 chr2 26676681 26676717 -226579866 + (TG)n Simple_repeat Simple_repeat 2 37 0 323 227 182 0 chr2 26676735 26676823 -226579760 - MIR SINE MIR -153 109 6 183 139 0 0 chr2 26676967 26677003 -226579580 + (CCCTA)n Simple_repeat Simple_repeat 2 37 0 440 216 85 51 chr2 26677125 26677301 -226579282 - L1ME4a LINE L1 -1 6120 5939 1851 175 15 18 chr2 26677314 26677657 -226578926 - MER2 DNA MER2_type 0 344 3 616 246 18 61 chr2 26677900 26678128 -226578455 - L1MC4a LINE L1 -1903 5905 5688 415 82 0 0 chr2 26678132 26678193 -226578390 - Alu SINE Alu -13 298 238 271 310 61 41 chr2 26678255 26678500 -226578083 - L1MC4a LINE L1 -449 5672 5423 180 0 0 0 chr2 26678502 26678522 -226578061 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2491 84 0 0 chr2 26678525 26678824 -226577759 + AluSc SINE Alu 1 299 -10 2318 157 66 23 chr2 26678824 26679265 -226577318 + L1MB2 LINE L1 5665 6124 -47 596 114 0 0 chr2 26679269 26679348 -226577235 + AluJ/FLAM SINE Alu 13 91 -221 839 146 26 1 chr2 26679349 26679501 -226577082 - L1MB2 LINE L1 -252 5911 5753 383 221 29 39 chr2 26679655 26679759 -226576824 - L2 LINE L2 -1 3312 3210 630 168 35 0 chr2 26679957 26680070 -226576513 - AluSg/x SINE Alu -5 307 191 227 161 0 36 chr2 26680070 26680126 -226576457 + T-rich Low_complexity Low_complexity 3 56 0 1751 131 94 0 chr2 26680149 26680424 -226576159 + AluJb SINE Alu 3 303 -9 351 0 0 0 chr2 26680469 26680508 -226576075 + (CA)n Simple_repeat Simple_repeat 2 40 0 234 183 32 86 chr2 26680514 26680607 -226575976 + L1MA9 LINE L1 6183 6270 -42 3922 98 36 23 chr2 26680709 26681206 -226575377 + LTR38B LTR ERV1 1 509 -101 2126 93 10 7 chr2 26681206 26681495 -226575088 - AluSx SINE Alu -22 290 1 3922 98 36 23 chr2 26681495 26681599 -226574984 + LTR38B LTR ERV1 509 610 0 3217 124 23 2 chr2 26681661 26682138 -226574445 + LTR15 LTR ERV1 1 487 -6 7672 146 60 35 chr2 26682144 26683773 -226572810 + HERV15 LTR ERV1 1 1387 -7039 4019 259 22 28 chr2 26683762 26684795 -226571788 + HERV15 LTR ERV1 1701 2727 -5699 * 1761 275 98 20 chr2 26684976 26685752 -226570831 - HERV16 LTR ERVL -2759 2237 1598 323 325 0 0 chr2 26685818 26685895 -226570688 - L2 LINE L2 -58 3214 3138 2200 112 7 3 chr2 26686144 26686449 -226570134 - AluSx SINE Alu -6 306 1 1300 241 145 10 chr2 26686462 26686861 -226569722 - MER97a DNA MER1_type? -438 456 4 2185 106 0 10 chr2 26686916 26687218 -226569365 + AluSx SINE Alu 1 299 -13 361 77 0 0 chr2 26687305 26687357 -226569226 - AluSp SINE Alu 0 302 251 1842 119 15 0 chr2 26687463 26687724 -226568859 - AluSp SINE Alu -48 265 1 242 262 48 0 chr2 26687727 26687853 -226568730 - L1P LINE L1 -846 5300 5169 1482 141 109 62 chr2 26687972 26688248 -226568335 + AluJo SINE Alu 1 289 -23 332 324 33 52 chr2 26688276 26688606 -226567977 - L1M4 LINE L1 -1085 5061 4738 2124 127 3 3 chr2 26688607 26688907 -226567676 - AluJo SINE Alu -12 300 1 1958 226 94 8 chr2 26689263 26689753 -226566830 - MLT1F LTR MaLR -8 534 3 1711 256 106 16 chr2 26689901 26690589 -226565994 - L1MC4a LINE L1 -101 6020 5270 414 268 45 57 chr2 26690744 26690901 -226565682 - L1MC4 LINE L1 -143 7899 7745 659 225 62 77 chr2 26690940 26690990 -226565593 + MIR SINE MIR 20 69 -193 2111 99 7 3 chr2 26690990 26691323 -226565260 + AluSq SINE Alu 1 334 0 659 225 62 77 chr2 26691323 26691480 -226565103 + MIR SINE MIR 69 225 -37 24 0 0 0 chr2 26691742 26691766 -226564817 + AT_rich Low_complexity Low_complexity 1 24 0 2355 106 3 0 chr2 26692636 26692947 -226563636 + AluSx SINE Alu 1 312 0 354 240 29 19 chr2 26692964 26693085 -226563498 + MIR SINE MIR 33 154 -64 187 276 195 23 chr2 26693477 26693564 -226563019 + L2 LINE L2 3139 3240 -32 180 0 0 0 chr2 26693946 26693966 -226562617 + (TA)n Simple_repeat Simple_repeat 1 20 0 212 292 56 11 chr2 26694064 26694153 -226562430 - MIR3 SINE MIR -4 204 112 3159 138 0 24 chr2 26694356 26694529 -226562054 - HERVK22 LTR ERVK -6026 811 635 2519 84 0 0 chr2 26694529 26694838 -226561745 - AluY SINE Alu -2 309 1 3159 138 0 24 chr2 26694838 26695156 -226561427 - HERVK22 LTR ERVK -6202 635 332 1037 77 0 8 chr2 26695156 26695286 -226561297 + AluY SINE Alu 1 129 -182 585 162 29 0 chr2 26695386 26695491 -226561092 - AluJb SINE Alu -203 109 2 824 278 28 24 chr2 26695502 26695793 -226560790 + HAL1 LINE L1 2 293 -2214 879 253 106 76 chr2 26695819 26696509 -226560074 + MER49 LTR ERV1 15 923 0 1004 263 50 66 chr2 26696601 26696866 -226559717 + HAL1 LINE L1 435 695 -1812 2167 93 11 0 chr2 26696866 26697168 -226559415 + AluSx SINE Alu 3 307 0 1004 263 50 66 chr2 26697168 26697282 -226559301 + HAL1 LINE L1 695 809 -1698 1854 165 7 7 chr2 26697294 26697603 -226558980 - AluJo SINE Alu -3 309 1 1772 176 106 131 chr2 26698188 26698618 -226557965 + HAL1 LINE L1 805 1244 -1263 2374 91 0 0 chr2 26698618 26698944 -226557639 - AluSq SINE Alu 0 326 1 1772 176 106 131 chr2 26698944 26699184 -226557399 + HAL1 LINE L1 1244 1455 -1052 309 26 0 0 chr2 26699184 26699222 -226557361 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 1772 176 106 131 chr2 26699222 26699381 -226557202 + HAL1 LINE L1 1455 1616 -891 1405 162 62 26 chr2 26699580 26699889 -226556694 - MER33 DNA MER1_type -4 320 1 1516 121 0 0 chr2 26699976 26700182 -226556401 + AluSc SINE Alu 88 293 -16 954 97 0 0 chr2 26700636 26700770 -226555813 + AluSp/q SINE Alu 179 312 -1 2518 55 0 16 chr2 26701144 26701454 -226555129 - AluY SINE Alu -6 305 1 1014 300 88 16 chr2 26701478 26702095 -226554488 - L1MC4a LINE L1 -1893 5915 5255 762 170 0 43 chr2 26702288 26702429 -226554154 - AluJo SINE Alu -176 136 2 276 30 0 0 chr2 26702488 26702521 -226554062 + (TTA)n Simple_repeat Simple_repeat 2 34 0 695 178 0 8 chr2 26702530 26702648 -226553935 - FLAM_C SINE Alu -25 118 2 2132 114 3 13 chr2 26704022 26704328 -226552255 + AluSx SINE Alu 1 303 -9 480 103 0 0 chr2 26704616 26704684 -226551899 - AluSc SINE Alu -8 301 234 1001 79 0 8 chr2 26704684 26704810 -226551773 - AluSc SINE Alu -184 125 1 1714 228 34 55 chr2 26704834 26705155 -226551428 - L1MC4a LINE L1 -1037 5109 4783 2748 119 41 2 chr2 26705155 26705566 -226551017 - MSTA LTR MaLR 0 428 2 1714 228 34 55 chr2 26705566 26705695 -226550888 - L1MC4a LINE L1 -1363 4783 4671 2088 145 7 0 chr2 26705695 26705999 -226550584 - AluSx SINE Alu -6 306 1 1714 228 34 55 chr2 26705999 26706112 -226550471 - L1MC4a LINE L1 -1475 4671 4557 438 250 17 0 chr2 26706158 26706278 -226550305 - L1MC4a LINE L1 -1792 4354 4233 842 229 79 12 chr2 26706427 26706669 -226549914 + MIR SINE MIR 3 262 0 29 0 0 0 chr2 26707522 26707551 -226549032 + AT_rich Low_complexity Low_complexity 1 29 0 503 269 98 57 chr2 26707781 26707950 -226548633 - Charlie8 DNA MER1_type -65 276 91 2351 91 0 3 chr2 26707950 26708248 -226548335 - AluSg SINE Alu -13 297 1 503 269 98 57 chr2 26708248 26708342 -226548241 - Charlie8 DNA MER1_type -250 91 2 251 335 92 10 chr2 26708342 26708548 -226548035 + L2 LINE L2 2535 2757 -557 1813 170 10 0 chr2 26708596 26708890 -226547693 - AluJb SINE Alu -15 297 1 617 214 312 0 chr2 26709239 26709393 -226547190 + Tigger5 DNA MER2_type 11 212 -2111 2249 116 0 0 chr2 26709393 26709686 -226546897 + AluSx SINE Alu 1 293 -19 1853 96 49 146 chr2 26709686 26709876 -226546707 - HERVK22 LTR ERVK -6489 348 212 4894 117 32 38 chr2 26709876 26710661 -226545922 - LTR17 LTR ERV1 0 780 1 1853 96 49 146 chr2 26710661 26710855 -226545728 - HERVK22 LTR ERVK -6625 212 1 3312 93 18 7 chr2 26710856 26711309 -226545274 - LTR22A LTR ERVK 0 458 1 2264 117 3 0 chr2 26711729 26712038 -226544545 - AluSx SINE Alu -2 310 1 188 329 0 0 chr2 26713077 26713150 -226543433 + L2 LINE L2 2284 2356 -958 2107 136 0 0 chr2 26713150 26713444 -226543139 + AluSx SINE Alu 1 294 -18 227 311 0 0 chr2 26713946 26714020 -226542563 + L1MC/D LINE L1 5812 5885 -1923 21 0 0 0 chr2 26714571 26714592 -226541991 + AT_rich Low_complexity Low_complexity 1 21 0 2424 95 3 0 chr2 26714674 26714978 -226541605 + AluSx SINE Alu 1 305 -7 345 215 20 114 chr2 26715821 26715923 -226540660 + L1MD3 LINE L1 5794 5879 -1929 2165 134 0 16 chr2 26715923 26716230 -226540353 + AluJb SINE Alu 1 302 -10 345 215 20 114 chr2 26716230 26716276 -226540307 + L1MD3 LINE L1 5879 5928 -1880 1782 154 74 0 chr2 26716385 26716670 -226539913 + AluSx SINE Alu 1 306 -6 2162 134 0 0 chr2 26716970 26717280 -226539303 + AluSx SINE Alu 1 310 0 1316 130 0 211 chr2 26717575 26717944 -226538639 + AluJo SINE Alu 1 291 -21 1953 128 34 7 chr2 26718254 26718551 -226538032 + AluSx SINE Alu 1 305 -7 3389 156 180 137 chr2 26718859 26719180 -226537403 + L1MD3 LINE L1 6736 7042 -953 2111 94 0 0 chr2 26719180 26719446 -226537137 + AluSx SINE Alu 35 300 -12 3389 156 180 137 chr2 26719446 26719523 -226537060 + L1MD3 LINE L1 7042 7114 -881 1706 173 10 23 chr2 26719523 26719830 -226536753 + AluJo SINE Alu 10 312 0 3389 156 180 137 chr2 26719830 26719961 -226536622 + L1MD3 LINE L1 7114 7238 -757 526 239 26 8 chr2 26719961 26720078 -226536505 + MLT1F1 LTR MaLR 1 119 -448 3389 156 180 137 chr2 26720078 26720521 -226536062 + L1MD3 LINE L1 7238 7660 -335 2404 90 0 7 chr2 26720521 26720822 -226535761 + AluSq SINE Alu 1 299 -14 3389 156 180 137 chr2 26720822 26720879 -226535704 + L1MD3 LINE L1 7660 7713 -282 1544 184 25 22 chr2 26720879 26721157 -226535426 - AluJo SINE Alu -33 279 1 3389 156 180 137 chr2 26721157 26721214 -226535369 + L1MD3 LINE L1 7713 7994 -1 27 29 0 0 chr2 26721250 26721284 -226535299 + AT_rich Low_complexity Low_complexity 1 34 0 2376 46 0 55 chr2 26722535 26722842 -226533741 - AluY SINE Alu -12 299 10 203 179 0 0 chr2 26722994 26723033 -226533550 + A-rich Low_complexity Low_complexity 1 39 0 1418 124 9 5 chr2 26723071 26723288 -226533295 + HERV15 LTR ERV1 3160 3377 -5358 21412 106 10 8 chr2 26723288 26726268 -226530315 + HERV15 LTR ERV1 3776 6762 -1973 8240 83 6 18 chr2 26726261 26727364 -226529219 + HERV15 LTR ERV1 6982 8071 -664 * 2794 115 8 0 chr2 26727344 26727734 -226528849 + HERV15 LTR ERV1 8343 8735 0 * 3075 122 25 21 chr2 26727734 26728219 -226528364 + LTR15 LTR ERV1 1 487 -6 266 324 0 0 chr2 26728223 26728325 -226528258 - L1MC/D LINE L1 -1939 5869 5768 1618 152 32 26 chr2 26728411 26728721 -226527862 - AluJb SINE Alu 0 312 1 2164 112 0 0 chr2 26728901 26729206 -226527377 - AluSx SINE Alu -5 307 3 2351 82 0 0 chr2 26729528 26729834 -226526749 + AluY SINE Alu 3 308 -3 45 45 0 0 chr2 26730218 26730284 -226526299 + AT_rich Low_complexity Low_complexity 1 66 0 521 329 0 22 chr2 26732293 26732430 -226524153 - MIR3 SINE MIR -64 144 11 190 271 169 0 chr2 26735943 26736002 -226520581 + MIR SINE MIR 124 192 -70 1063 192 195 3 chr2 26736811 26737098 -226519485 - Charlie1b DNA MER1_type -181 342 1 363 322 7 20 chr2 26737178 26737324 -226519259 + GA-rich Low_complexity Low_complexity 1 144 0 773 163 8 0 chr2 26740126 26740249 -226516334 + FLAM_A SINE Alu 1 124 -9 804 160 23 6 chr2 26741328 26741503 -226515080 + CT-rich Low_complexity Low_complexity 2 179 0 843 221 0 12 chr2 26741530 26741702 -226514881 - FAM SINE Alu -10 175 6 311 210 80 105 chr2 26741961 26742028 -226514555 + L1MC4a LINE L1 5312 5379 -2429 2105 118 3 0 chr2 26742028 26742333 -226514250 + AluSq SINE Alu 1 306 -7 311 210 80 105 chr2 26742333 26742427 -226514156 + L1MC4a LINE L1 5379 5469 -2339 378 293 89 19 chr2 26742453 26742723 -226513860 + L1MC4a LINE L1 5649 5937 -1871 2151 88 14 7 chr2 26743503 26743799 -226512784 + AluSx SINE Alu 1 298 -14 2173 99 3 16 chr2 26743812 26744126 -226512457 + AluSg SINE Alu 1 310 0 221 211 105 40 chr2 26744453 26744529 -226512054 + L2 LINE L2 3192 3272 0 2124 87 0 27 chr2 26744662 26744961 -226511622 + AluSx SINE Alu 1 291 -21 671 206 0 22 chr2 26745281 26745417 -226511166 - FLAM_A SINE Alu 0 133 1 1919 147 3 0 chr2 26745442 26745741 -226510842 - AluSx SINE Alu -12 300 1 1672 151 25 54 chr2 26745774 26746091 -226510492 + AluJb SINE Alu 3 310 -2 5193 66 38 0 chr2 26746153 26746834 -226509749 - L1PA13 LINE L1 -2 6161 5455 1989 129 10 0 chr2 26748585 26748880 -226507703 - AluSx SINE Alu -14 298 1 1022 160 20 60 chr2 26749312 26749512 -226507071 - MSTD LTR MaLR -1 395 204 189 121 0 0 chr2 26749530 26749563 -226507020 + (GA)n Simple_repeat Simple_repeat 1 33 0 366 142 28 123 chr2 26749601 26749707 -226506876 + MSTD LTR MaLR 299 394 -2 * 796 116 0 0 chr2 26749707 26749815 -226506768 - MSTD LTR MaLR -288 108 1 301 306 47 0 chr2 26749848 26749933 -226506650 + MIR3 SINE MIR 73 161 -47 2463 215 89 19 chr2 26749934 26750258 -226506325 - L1MDb LINE L1 -4676 1864 1564 2110 99 7 3 chr2 26750258 26750562 -226506021 - AluY SINE Alu -6 305 1 2463 215 89 19 chr2 26750562 26750712 -226505871 - L1MDb LINE L1 -4976 1564 1426 1910 232 8 37 chr2 26750712 26750958 -226505625 + MLT1D LTR MaLR 4 229 -276 1794 134 25 14 chr2 26750958 26751241 -226505342 - AluJb SINE Alu -24 288 3 1910 232 8 37 chr2 26751241 26751511 -226505072 + MLT1D LTR MaLR 229 505 0 2463 215 89 19 chr2 26751511 26751997 -226504586 - L1MDb LINE L1 -5114 1426 907 423 360 88 32 chr2 26752485 26752793 -226503790 - L1MDb LINE L1 -6193 347 23 838 227 56 7 chr2 26752797 26753083 -226503500 - L1MEc LINE L1 -3166 3049 2750 2042 108 20 0 chr2 26753083 26753379 -226503204 + AluSx SINE Alu 1 302 -10 834 210 19 0 chr2 26753394 26753556 -226503027 + FRAM SINE Alu 1 165 -1 350 277 65 48 chr2 26753603 26753913 -226502670 - L1MEc LINE L1 -4052 2344 2030 1886 149 0 0 chr2 26754268 26754556 -226502027 + AluJb SINE Alu 1 288 -24 805 138 0 0 chr2 26754591 26754714 -226501869 - FLAM_C SINE Alu -7 136 14 219 387 21 0 chr2 26754960 26755053 -226501530 + L2 LINE L2 240 334 -2980 495 271 75 8 chr2 26755236 26755369 -226501214 - MER21B LTR ERV1 -654 209 68 1819 111 59 21 chr2 26755630 26755919 -226500664 - AluSx SINE Alu -8 304 5 723 212 0 0 chr2 26755984 26756116 -226500467 + FLAM_A SINE Alu 1 132 -1 2868 151 99 16 chr2 26756869 26757474 -226499109 - L1MB7 LINE L1 -41 6143 5476 377 335 79 60 chr2 26757773 26758039 -226498544 - L2 LINE L2 -16 3256 2986 429 103 0 0 chr2 26758126 26758194 -226498389 + (TG)n Simple_repeat Simple_repeat 2 69 0 2152 117 10 0 chr2 26758254 26758563 -226498020 + AluSx SINE Alu 1 312 0 651 281 45 27 chr2 26758921 26759142 -226497441 + MLT1H LTR MaLR 2 226 -323 787 138 8 0 chr2 26759146 26759276 -226497307 - L1MA9 LINE L1 0 6312 6182 596 222 24 8 chr2 26759276 26759402 -226497181 + MLT1H LTR MaLR 416 543 -6 2005 122 0 3 chr2 26759551 26759873 -226496710 + AluSx SINE Alu 1 321 0 818 182 8 0 chr2 26760043 26760175 -226496408 + FLAM_A SINE Alu 1 133 0 201 147 0 0 chr2 26760511 26760545 -226496038 + (T)n Simple_repeat Simple_repeat 1 34 0 1521 135 11 22 chr2 26760688 26760962 -226495621 - AluJo SINE Alu -30 282 12 1425 137 17 99 chr2 26760998 26761051 -226495532 + MER58B DNA MER1_type 74 130 -2290 1666 180 41 3 chr2 26761051 26761367 -226495216 + L1MC1 LINE L1 6000 6327 -6 1425 137 17 99 chr2 26761367 26761605 -226494978 + MER58B DNA MER1_type 130 341 0 1249 272 65 7 chr2 26761639 26762049 -226494534 + HERV16 LTR ERVL 2755 3090 -1906 817 144 12 24 chr2 26762051 26762218 -226494365 - AluJo SINE Alu -147 165 1 22 0 0 0 chr2 26762315 26762337 -226494246 + GC_rich Low_complexity Low_complexity 1 22 0 245 196 54 0 chr2 26762858 26762914 -226493669 - L2 LINE L2 0 3313 3255 1973 118 3 7 chr2 26763109 26763397 -226493186 + AluSx SINE Alu 3 289 -23 297 241 139 9 chr2 26763469 26763577 -226493006 + MIR SINE MIR 23 144 -64 1282 146 105 34 chr2 26764128 26764423 -226492160 + LTR52 LTR ERVL 5 320 -101 1422 128 124 0 chr2 26764517 26764767 -226491816 + L1MA5A LINE L1 5997 6277 -20 2072 131 0 10 chr2 26764767 26765080 -226491503 - AluSx SINE Alu -2 310 1 23 33 0 0 chr2 26765085 26765115 -226491468 + AT_rich Low_complexity Low_complexity 1 30 0 349 336 9 0 chr2 26765457 26765564 -226491019 + L2 LINE L2 3201 3308 -5 226 268 62 18 chr2 26765574 26765686 -226490897 + L1ME4a LINE L1 5685 5801 -361 239 193 136 23 chr2 26765776 26765864 -226490719 + L1ME4a LINE L1 5944 6041 -80 2151 90 37 0 chr2 26766131 26766430 -226490153 + AluSg SINE Alu 1 310 0 403 254 90 30 chr2 26767162 26767296 -226489287 - MIR SINE MIR -21 241 100 2153 98 7 7 chr2 26767732 26768039 -226488544 - AluSg SINE Alu -3 307 1 212 253 13 27 chr2 26769268 26769346 -226487237 + (TA)n Simple_repeat Simple_repeat 1 76 0 1815 141 0 7 chr2 26770056 26770346 -226486237 - AluSx SINE Alu -4 308 21 23 68 0 0 chr2 26770524 26770568 -226486015 + AT_rich Low_complexity Low_complexity 1 44 0 227 222 0 0 chr2 26776110 26776164 -226480419 + L1ME4a LINE L1 6067 6120 -1 297 219 73 110 chr2 26776635 26776753 -226479830 + L1ME LINE L1 5590 5702 -419 2049 146 0 16 chr2 26776753 26777068 -226479515 - AluJb SINE Alu -2 310 1 297 219 73 110 chr2 26777068 26777113 -226479470 + L1ME LINE L1 5702 5747 -374 303 343 76 0 chr2 26778333 26778438 -226478145 + L3 LINE CR1 1459 1571 -6 330 319 88 42 chr2 26779608 26779799 -226476784 - MIR SINE MIR -63 145 2 185 342 99 33 chr2 26780047 26780199 -226476384 + MIR3 SINE MIR 44 205 -3 2353 73 10 0 chr2 26780591 26780880 -226475703 - AluSg SINE Alu -18 292 1 645 321 55 9 chr2 26781346 26781564 -226475019 + MIR SINE MIR 2 229 -33 734 198 24 0 chr2 26781639 26781765 -226474818 - FLAM_A SINE Alu -3 130 2 355 252 84 23 chr2 26782286 26782417 -226474166 + MIR3 SINE MIR 68 206 -2 201 357 14 0 chr2 26782445 26782515 -226474068 + L2 LINE L2 2260 2330 -984 279 0 0 0 chr2 26783247 26783278 -226473305 + (A)n Simple_repeat Simple_repeat 1 31 0 2365 269 106 46 chr2 26783462 26784768 -226471815 + L1MC4a LINE L1 5255 6638 -1170 22 0 0 0 chr2 26784852 26784874 -226471709 + AT_rich Low_complexity Low_complexity 1 22 0 533 215 30 106 chr2 26784990 26785207 -226471376 + L1MC5 LINE L1 7304 7499 -462 1845 126 54 0 chr2 26785207 26785484 -226471099 - AluSq SINE Alu -21 292 1 533 215 30 106 chr2 26785484 26785531 -226471052 + L1MC5 LINE L1 7499 7548 -413 557 179 27 0 chr2 26785558 26785670 -226470913 + L1MC5 LINE L1 7680 7794 -167 354 298 21 28 chr2 26785699 26785840 -226470743 + L1ME LINE L1 41 180 -5890 304 302 33 61 chr2 26785877 26786089 -226470494 + L1ME LINE L1 258 463 -5607 1819 237 90 78 chr2 26786215 26786833 -226469750 + L1ME LINE L1 271 880 -5202 2064 133 0 7 chr2 26786833 26787127 -226469456 - AluJo SINE Alu -18 294 3 1819 237 90 78 chr2 26787127 26787821 -226468762 + L1ME LINE L1 880 1514 -4568 1783 145 64 14 chr2 26788355 26788652 -226467931 - AluJo SINE Alu 0 312 1 2358 86 3 7 chr2 26789607 26789910 -226466673 + AluSp SINE Alu 1 302 -11 355 246 78 21 chr2 26790284 26790426 -226466157 + L1MC5 LINE L1 7637 7786 -175 1302 138 6 0 chr2 26790426 26790607 -226465976 + AluSq SINE Alu 1 182 -131 25 0 0 0 chr2 26790711 26790736 -226465847 + AT_rich Low_complexity Low_complexity 1 25 0 1953 154 3 13 chr2 26791289 26791595 -226464988 + AluJo SINE Alu 3 305 -7 2206 101 10 10 chr2 26792064 26792372 -226464211 + AluSq SINE Alu 1 308 -5 5307 75 21 38 chr2 26792561 26793620 -226462963 + SVA Other Other 3 868 -592 6542 60 24 34 chr2 26793633 26794584 -226461999 + SVA Other Other 433 1374 -12 304 351 89 10 chr2 26794942 26795244 -226461339 - L2 LINE L2 -819 2495 2170 193 200 0 60 chr2 26795445 26795495 -226461088 + L2 LINE L2 3188 3234 -38 943 240 61 8 chr2 26795740 26795986 -226460597 - MER46C DNA MER2_type -10 328 70 594 245 51 38 chr2 26796405 26796646 -226459937 - L2 LINE L2 -34 3279 2944 1171 241 14 0 chr2 26796813 26797033 -226459550 - MER58A DNA MER1_type 0 224 2 362 333 32 0 chr2 26797817 26797910 -226458673 + MIR SINE MIR 19 114 -94 222 62 0 0 chr2 26798107 26798139 -226458444 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 2338 105 3 0 chr2 26798353 26798658 -226457925 + AluSx SINE Alu 1 306 -6 23 0 0 0 chr2 26799632 26799655 -226456928 + AT_rich Low_complexity Low_complexity 1 23 0 880 145 15 0 chr2 26800239 26800370 -226456213 + FLAM_A SINE Alu 1 133 0 1725 126 99 8 chr2 26800410 26800673 -226455910 + AluSx SINE Alu 1 287 -25 799 200 123 0 chr2 26801102 26801272 -226455311 + MIR SINE MIR 71 261 -1 2322 87 23 0 chr2 26801674 26801974 -226454609 - AluSx SINE Alu -5 307 1 1531 52 134 0 chr2 26802141 26802335 -226454248 + AluY SINE Alu 58 277 -34 2129 122 3 13 chr2 26802496 26802799 -226453784 + AluSx SINE Alu 1 300 -12 1121 153 144 4 chr2 26802892 26803118 -226453465 + MER44D DNA MER2_type 1 528 -81 670 164 138 0 chr2 26803118 26803234 -226453349 + MER2 DNA MER2_type 1 132 -213 2410 63 3 0 chr2 26803234 26803519 -226453064 - AluY SINE Alu -25 286 1 695 306 156 42 chr2 26804668 26804796 -226451787 - L3 LINE CR1 -140 1437 1325 2223 118 0 0 chr2 26804796 26805092 -226451491 - AluSx SINE Alu -16 296 1 695 306 156 42 chr2 26805092 26805234 -226451349 - L3 LINE CR1 -252 1325 1201 979 210 93 0 chr2 26805234 26805439 -226451144 - MER58A DNA MER1_type 0 224 1 695 306 156 42 chr2 26805439 26805880 -226450703 - L3 LINE CR1 -376 1201 644 613 133 0 51 chr2 26805930 26806028 -226450555 + AluJ/FLAM SINE Alu 3 95 -217 1972 96 62 7 chr2 26806037 26806328 -226450255 - AluSx SINE Alu -1 311 5 1932 137 40 28 chr2 26806330 26806652 -226449931 - THE1B LTR MaLR -38 326 1 820 261 70 21 chr2 26806748 26807032 -226449551 + MLT1C LTR MaLR 168 465 -2 285 299 84 9 chr2 26807051 26807158 -226449425 - L2 LINE L2 -208 3105 2991 849 191 111 36 chr2 26807216 26807441 -226449142 + L1ME3 LINE L1 5913 6154 -8 325 322 256 22 chr2 26807520 26807883 -226448700 - L2 LINE L2 -341 2973 2526 988 178 6 12 chr2 26808126 26808289 -226448294 + FRAM SINE Alu 1 158 -18 1733 170 3 7 chr2 26808412 26808706 -226447877 + AluJb SINE Alu 3 295 -17 574 204 154 43 chr2 26809306 26809468 -226447115 - MIR SINE MIR -13 249 70 2306 85 0 16 chr2 26809762 26810069 -226446514 + AluY SINE Alu 2 303 -8 1483 169 48 45 chr2 26810306 26810596 -226445987 - AluJo SINE Alu -19 293 3 2418 71 3 0 chr2 26810818 26811115 -226445468 + AluSq SINE Alu 1 298 -15 2225 83 27 7 chr2 26811120 26811421 -226445162 + AluSp SINE Alu 7 313 0 300 272 31 93 chr2 26811645 26811807 -226444776 - L2 LINE L2 -2 3311 3160 194 331 88 37 chr2 26812735 26812871 -226443712 + L3b LINE CR1 1302 1444 -139 287 232 0 0 chr2 26813027 26813083 -226443500 - L2 LINE L2 0 3272 3217 222 294 59 0 chr2 26813206 26813274 -226443309 - L2 LINE L2 -261 3052 2981 191 291 202 38 chr2 26813372 26813585 -226442998 - MIR SINE MIR -2 260 13 185 202 294 28 chr2 26815190 26815299 -226441284 - MIR SINE MIR -14 248 111 231 286 0 0 chr2 26815436 26815492 -226441091 - L2 LINE L2 -1 3312 3257 978 133 42 18 chr2 26815593 26815758 -226440825 - AluJb SINE Alu -29 283 115 2052 140 3 0 chr2 26815977 26816277 -226440306 + AluSx SINE Alu 1 301 -11 247 272 78 29 chr2 26816596 26816678 -226439905 + MIR3 SINE MIR 66 155 -53 2552 49 0 13 chr2 26816678 26816983 -226439600 + AluY SINE Alu 1 301 -10 247 272 78 29 chr2 26816983 26817003 -226439580 + MIR3 SINE MIR 155 173 -35 1597 154 60 0 chr2 26817180 26817447 -226439136 + Tigger3(Golem) DNA MER2_type 2 284 -2745 226 167 28 0 chr2 26817446 26817482 -226439101 + Tigger3(Golem) DNA MER2_type 3002 3038 0 * 24 0 0 0 chr2 26817848 26817872 -226438711 + AT_rich Low_complexity Low_complexity 1 24 0 2488 58 0 0 chr2 26818338 26818629 -226437954 - AluY SINE Alu -20 291 1 673 157 0 9 chr2 26818649 26818757 -226437826 + FLAM_C SINE Alu 27 133 -10 2192 108 3 0 chr2 26819029 26819324 -226437259 - AluSx SINE Alu -16 296 1 3554 128 39 7 chr2 26820313 26820884 -226435699 - LTR38B LTR ERV1 0 610 22 183 42 0 0 chr2 26820888 26820912 -226435671 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 573 143 0 22 chr2 26820914 26821005 -226435578 - FRAM SINE Alu -19 157 69 881 200 47 147 chr2 26821081 26821219 -226435364 - L1MC4 LINE L1 -881 6927 6777 339 221 0 12 chr2 26821219 26821305 -226435278 - L1MA10 LINE L1 -15 6319 6235 881 200 47 147 chr2 26821305 26821328 -226435255 - L1MC4 LINE L1 -1031 6777 6753 2228 114 0 10 chr2 26821328 26821636 -226434947 - AluSq SINE Alu -8 305 1 881 200 47 147 chr2 26821636 26821789 -226434794 - L1MC4 LINE L1 -1055 6753 6701 1837 161 3 20 chr2 26821789 26822094 -226434489 + AluSx SINE Alu 1 300 -12 881 200 47 147 chr2 26822094 26822245 -226434338 - L1MC4 LINE L1 -1107 6701 6536 182 33 67 0 chr2 26823862 26823892 -226432691 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 25 31 0 0 chr2 26825039 26825071 -226431512 + AT_rich Low_complexity Low_complexity 1 32 0 1970 148 10 0 chr2 26826222 26826519 -226430064 - AluJo SINE Alu -8 304 5 814 112 0 17 chr2 26828520 26828636 -226427947 + FLAM_C SINE Alu 26 139 -4 335 301 68 90 chr2 26829388 26829559 -226427024 - L2 LINE L2 -143 3129 2967 2394 68 13 13 chr2 26829559 26829870 -226426713 + AluSp SINE Alu 1 311 -2 335 301 68 90 chr2 26829870 26830020 -226426563 - L2 LINE L2 -305 2967 2815 198 286 36 0 chr2 26830025 26830081 -226426502 - L3 LINE CR1 -179 1398 1341 221 351 40 20 chr2 26830142 26830293 -226426290 - L3 LINE CR1 -330 1247 1094 2169 102 3 43 chr2 26831233 26831555 -226425028 - AluY SINE Alu -2 309 1 2430 82 0 0 chr2 26832231 26832536 -226424047 + AluY SINE Alu 1 305 -6 2230 112 0 13 chr2 26833452 26833755 -226422828 - AluSx SINE Alu -13 299 1 22 70 0 0 chr2 26834116 26834159 -226422424 + AT_rich Low_complexity Low_complexity 1 43 0 2095 141 6 10 chr2 26834713 26835026 -226421557 - AluSx SINE Alu 0 312 1 367 239 90 8 chr2 26835093 26835227 -226421356 - L1ME4a LINE L1 0 6121 5977 2279 100 0 10 chr2 26835484 26835794 -226420789 - AluSx SINE Alu -5 307 1 183 42 0 0 chr2 26835796 26835820 -226420763 + (T)n Simple_repeat Simple_repeat 1 24 0 2244 100 3 0 chr2 26836027 26836317 -226420266 + AluSx SINE Alu 1 291 -21 784 113 81 124 chr2 26836841 26837027 -226419556 - MER20 DNA MER1_type 0 219 42 1652 186 16 16 chr2 26837090 26837402 -226419181 + AluJb SINE Alu 1 312 0 2050 135 3 0 chr2 26837533 26837829 -226418754 + AluJb SINE Alu 2 298 -14 2426 68 10 0 chr2 26838074 26838381 -226418202 + AluY SINE Alu 1 310 -1 498 232 14 56 chr2 26838434 26838576 -226418007 + MIR SINE MIR 4 139 -123 321 208 0 0 chr2 26838711 26838788 -226417795 + (TA)n Simple_repeat Simple_repeat 2 78 0 422 283 151 0 chr2 26838795 26838961 -226417622 - MIR SINE MIR -71 191 1 2299 117 0 0 chr2 26839716 26840025 -226416558 - AluSx SINE Alu -3 309 1 1057 250 133 42 chr2 26840448 26840754 -226415829 + L1ME LINE L1 4974 5251 -919 2372 75 0 7 chr2 26840754 26841049 -226415534 + AluSg SINE Alu 1 293 -17 1057 250 133 42 chr2 26841049 26841285 -226415298 + L1ME LINE L1 5251 5464 -706 2080 65 69 0 chr2 26841285 26841560 -226415023 + AluY SINE Alu 1 294 -17 1057 250 133 42 chr2 26841560 26841706 -226414877 + L1ME LINE L1 5464 5723 -447 255 140 0 40 chr2 26841810 26841860 -226414723 + L1MD3 LINE L1 7063 7110 -885 446 152 33 43 chr2 26841867 26841959 -226414624 + MLT1F1 LTR MaLR 35 125 -442 2211 157 47 15 chr2 26841959 26842368 -226414215 + L1MD3 LINE L1 7404 7825 -170 1996 102 0 37 chr2 26842445 26842740 -226413843 - AluSx SINE Alu -28 284 1 1976 124 11 7 chr2 26843255 26843558 -226413025 + AluSq SINE Alu 1 304 0 2236 118 0 7 chr2 26844302 26844607 -226411976 + AluSx SINE Alu 1 303 -9 1016 150 7 0 chr2 26845362 26845515 -226411068 - MER7A DNA MER2_type -1 335 182 1994 136 16 19 chr2 26845517 26845839 -226410744 - MER1B DNA MER1_type 0 339 4 844 181 110 16 chr2 26845841 26846023 -226410560 - MER7A DNA MER2_type -149 197 1 193 354 0 0 chr2 26846033 26846081 -226410502 + L2 LINE L2 3210 3257 -15 2273 107 0 0 chr2 26846419 26846719 -226409864 + AluSq SINE Alu 6 305 -8 1900 55 0 0 chr2 26847178 26847398 -226409185 + AluY SINE Alu 79 298 -13 2193 125 0 0 chr2 26847642 26847947 -226408636 + AluSx SINE Alu 1 305 -7 405 271 59 27 chr2 26848665 26848946 -226407637 - L1ME3 LINE L1 -225 5939 5651 467 122 0 12 chr2 26848955 26849037 -226407546 + (TG)n Simple_repeat Simple_repeat 2 82 0 2119 112 21 0 chr2 26849043 26849330 -226407253 - AluSx SINE Alu -19 293 1 406 224 128 66 chr2 26849857 26849960 -226406623 + L1ME4a LINE L1 5797 5892 -229 1873 161 0 7 chr2 26849960 26850252 -226406331 + AluJb SINE Alu 1 290 -22 406 224 128 66 chr2 26850252 26850452 -226406131 + L1ME4a LINE L1 5892 6119 -2 1803 170 13 10 chr2 26850619 26850919 -226405664 - AluJo SINE Alu -11 301 1 599 222 89 22 chr2 26851956 26852136 -226404447 + MLT1D LTR MaLR 12 203 -302 207 318 45 0 chr2 26852452 26852518 -226404065 + MIR SINE MIR 38 106 -102 21 0 0 0 chr2 26852747 26852768 -226403815 + AT_rich Low_complexity Low_complexity 1 21 0 531 150 15 105 chr2 26852842 26852975 -226403608 - L2 LINE L2 -2 3311 3191 706 144 117 0 chr2 26853271 26853382 -226403201 - FLAM_A SINE Alu -6 127 4 1986 90 6 99 chr2 26853953 26854298 -226402285 + AluSq SINE Alu 1 313 0 1670 141 100 4 chr2 26854535 26854804 -226401779 - AluSx SINE Alu -17 295 1 536 186 219 11 chr2 26855182 26855365 -226401218 - MIR SINE MIR -10 252 32 2385 48 41 0 chr2 26855370 26855665 -226400918 - AluY SINE Alu -4 307 1 352 230 186 0 chr2 26855719 26855832 -226400751 - MIR3 SINE MIR -45 163 30 2082 91 14 11 chr2 26907184 26907469 -226349114 - AluSx SINE Alu -6 306 21 22 56 0 0 chr2 26907573 26907609 -226348974 + AT_rich Low_complexity Low_complexity 1 36 0 372 245 224 21 chr2 26907662 26907805 -226348778 - L1ME3 LINE L1 -459 5662 5491 848 268 45 23 chr2 26908573 26908883 -226347700 - L1MC5 LINE L1 -42 7919 7603 243 266 138 21 chr2 26908951 26909045 -226347538 - L2 LINE L2 0 3272 3168 2217 74 0 3 chr2 26909364 26909649 -226346934 + AluSx SINE Alu 1 284 -28 183 235 0 0 chr2 26910632 26910666 -226345917 + L2 LINE L2 3190 3223 -49 183 225 50 0 chr2 26910651 26910691 -226345892 + L2 LINE L2 3262 3303 -10 714 215 77 5 chr2 26910912 26911107 -226345476 + L1ME2 LINE L1 5956 6164 0 1891 123 7 29 chr2 26911277 26911586 -226344997 + AluSx SINE Alu 1 302 -10 586 252 60 7 chr2 26911668 26911819 -226344764 - MIR SINE MIR -100 162 4 1843 164 57 74 chr2 26915269 26915599 -226340984 + L1MB7 LINE L1 2732 3066 -3118 1843 147 19 13 chr2 26915599 26915669 -226340914 + L1MB7 LINE L1 5854 5922 -262 2107 152 36 0 chr2 26915669 26916005 -226340578 - MER7A DNA MER2_type 0 346 1 1843 147 19 13 chr2 26916005 26916247 -226340336 + L1MB7 LINE L1 5922 6168 -16 1843 164 57 74 chr2 26916247 26916707 -226339876 + L1MB7 LINE L1 3066 3532 -2652 2207 95 0 16 chr2 26916707 26917012 -226339571 - AluSx SINE Alu -12 300 1 1843 164 57 74 chr2 26917012 26918084 -226338499 + L1MB7 LINE L1 3532 4620 -1564 2306 92 0 0 chr2 26918084 26918387 -226338196 - AluSq SINE Alu -10 303 1 1499 146 29 0 chr2 26918391 26918631 -226337952 + Tigger2 DNA MER2_type 2471 2717 -1 1843 164 57 74 chr2 26918631 26919496 -226337087 + L1MB7 LINE L1 4623 6026 -158 2120 112 0 13 chr2 26919496 26919810 -226336773 - AluY SINE Alu -1 310 1 1843 164 57 74 chr2 26919810 26919951 -226336632 + L1MB7 LINE L1 6026 6168 -16 534 152 0 0 chr2 26920054 26920133 -226336450 - AluJ/FLAM SINE Alu -232 80 2 228 152 0 0 chr2 26920254 26920287 -226336296 + MER103 DNA DNA 1 33 -133 245 254 30 0 chr2 26920528 26920595 -226335988 - L3 LINE CR1 -1 1576 1508 369 306 4 66 chr2 26920812 26921054 -226335529 + L2 LINE L2 2817 3043 -229 2171 77 24 7 chr2 26921442 26921740 -226334843 - AluSg SINE Alu -7 303 1 1387 124 0 10 chr2 26923256 26923465 -226333118 - AluJb SINE Alu -45 267 61 2191 82 0 0 chr2 26923624 26923933 -226332650 - AluSg SINE Alu 0 309 1 2117 99 10 10 chr2 26923944 26924256 -226332327 - AluSx SINE Alu 0 312 1 2703 176 36 102 chr2 26924526 26924686 -226331897 + L1MC5 LINE L1 6567 6736 -1225 1579 147 49 3 chr2 26924686 26924971 -226331612 + AluJb SINE Alu 7 304 -8 2703 176 36 102 chr2 26924971 26925108 -226331475 + L1MC5 LINE L1 6736 6880 -1081 1949 113 0 3 chr2 26925108 26925416 -226331167 + AluSc SINE Alu 1 307 0 2703 176 36 102 chr2 26925416 26925970 -226330613 + L1MC5 LINE L1 6880 7376 -585 196 292 15 0 chr2 26926037 26926102 -226330481 + MIR3 SINE MIR 132 197 -11 231 146 0 0 chr2 26927340 26927381 -226329202 + (TTCA)n Simple_repeat Simple_repeat 3 43 0 247 356 129 37 chr2 26928151 26928477 -226328106 - L2 LINE L2 -766 2548 2193 1067 213 77 65 chr2 26928767 26929120 -226327463 + MLT1A1 LTR MaLR 1 357 -8 257 226 0 0 chr2 26929908 26929961 -226326622 + GA-rich Low_complexity Low_complexity 3 55 0 622 280 20 4 chr2 26930006 26930211 -226326372 + L1MC4a LINE L1 5668 5797 -547 273 29 0 0 chr2 26930718 26930752 -226325831 + (CA)n Simple_repeat Simple_repeat 2 35 0 365 266 23 121 chr2 26930927 26931143 -226325440 + L1MC4 LINE L1 1872 6984 -1338 311 352 19 0 chr2 26931050 26931155 -226325428 - L1MC4 LINE L1 -1337 6705 6599 * 550 339 114 28 chr2 26931559 26932143 -226324440 - L2 LINE L2 0 3272 2640 2500 60 3 0 chr2 26934421 26934736 -226321847 - L1PA7 LINE L1 -1 6153 5838 812 178 0 84 chr2 26935221 26935412 -226321171 + AluJb SINE Alu 137 311 -1 1328 307 37 34 chr2 26935430 26935947 -226320636 + L1MC4a LINE L1 5106 5054 -1092 1935 98 0 15 chr2 26935947 26936213 -226320370 - AluSx SINE Alu -13 299 38 1328 307 37 34 chr2 26936213 26936561 -226320022 + L1MC4a LINE L1 5053 5399 -747 231 329 0 0 chr2 26937078 26937157 -226319426 + GA-rich Low_complexity Low_complexity 1 79 0 259 247 32 54 chr2 26937452 26937545 -226319038 - L2 LINE L2 -2 3270 3180 399 298 109 66 chr2 26937633 26938120 -226318463 - L2 LINE L2 -349 2965 2458 221 214 0 0 chr2 26943358 26943400 -226313183 - MIR SINE MIR -115 147 106 425 239 71 0 chr2 26944725 26944838 -226311745 - MER45A DNA AcHobo 0 178 58 282 238 9 29 chr2 26945146 26945251 -226311332 + (TG)n Simple_repeat Simple_repeat 2 104 0 345 196 20 39 chr2 26946248 26946350 -226310233 - MIR3 SINE MIR -24 184 85 344 297 35 34 chr2 26946547 26946707 -226309876 + MIR SINE MIR 16 173 -63 481 183 96 26 chr2 26947371 26947486 -226309097 - MIR3 SINE MIR -75 133 11 428 296 9 0 chr2 26948271 26948379 -226308204 + MIR3 SINE MIR 78 186 -22 2260 111 0 0 chr2 26948397 26948703 -226307880 - AluSx SINE Alu -6 306 1 269 292 118 30 chr2 26949589 26949782 -226306801 + MIR SINE MIR 11 224 -38 439 253 82 0 chr2 26949984 26950130 -226306453 - MER103 DNA DNA -1 165 8 296 219 94 0 chr2 26950182 26950246 -226306337 + MIR3 SINE MIR 133 202 -6 2949 74 0 5 chr2 26950753 26951133 -226305450 + L1PA5 LINE L1 5777 6154 0 667 287 102 4 chr2 26951443 26951687 -226304896 + MLT1J LTR MaLR 8 275 -236 441 311 160 9 chr2 26952227 26952446 -226304137 + L2 LINE L2 3021 3272 0 225 94 0 0 chr2 26952751 26952783 -226303800 + (TTC)n Simple_repeat Simple_repeat 3 34 0 424 316 23 0 chr2 26953773 26953906 -226302677 + (CA)n Simple_repeat Simple_repeat 1 136 0 257 138 17 35 chr2 26953906 26953964 -226302619 - MER4-int LTR ERV1 -5431 1167 1111 216 258 31 0 chr2 26954018 26954115 -226302468 + (CA)n Simple_repeat Simple_repeat 1 100 0 299 326 11 11 chr2 26954124 26954213 -226302370 + (CACG)n Simple_repeat Simple_repeat 3 91 0 400 242 19 12 chr2 26954215 26954376 -226302207 + (CA)n Simple_repeat Simple_repeat 1 162 0 405 48 0 114 chr2 26956486 26956653 -226299930 + (CCCCAG)n Simple_repeat Simple_repeat 1 148 0 447 288 2 56 chr2 26956874 26957077 -226299506 - MIR SINE MIR -56 206 21 2138 89 4 0 chr2 26959246 26959561 -226297022 - AluSq SINE Alu 0 319 4 546 246 0 0 chr2 26962934 26963536 -226293047 + (TG)n Simple_repeat Simple_repeat 1 602 0 313 387 45 10 chr2 26964037 26964236 -226292347 + MIR SINE MIR 7 212 -50 278 329 100 7 chr2 26964332 26964472 -226292111 - MER117 DNA MER1_type -30 167 15 286 299 55 97 chr2 26965321 26965810 -226290773 + L2 LINE L2 2725 3225 -47 262 336 16 0 chr2 26966296 26966421 -226290162 + (TGGA)n Simple_repeat Simple_repeat 2 128 0 408 215 0 0 chr2 26966439 26966546 -226290037 + (TGGG)n Simple_repeat Simple_repeat 4 110 0 501 248 0 0 chr2 26966646 26966875 -226289708 + (TGGA)n Simple_repeat Simple_repeat 1 229 0 478 331 199 9 chr2 26966901 26967227 -226289356 + L3 LINE CR1 1184 1571 -6 464 318 98 0 chr2 26967829 26968002 -226288581 + MIR SINE MIR 47 236 -26 329 293 195 11 chr2 26968301 26968475 -226288108 + MIR3 SINE MIR 2 207 -1 265 301 49 24 chr2 26968589 26968712 -226287871 + MIR SINE MIR 72 197 -65 494 300 29 53 chr2 26969893 26970063 -226286520 + MER91A DNA MER1_type 31 196 0 617 253 52 11 chr2 26970441 26970615 -226285968 + MIR SINE MIR 20 200 -62 248 351 97 12 chr2 26970616 26970781 -226285802 - MER104 DNA Tc2 -1 179 1 372 320 134 58 chr2 26971349 26972056 -226284527 - L2 LINE L2 -1037 2277 1517 1003 143 122 15 chr2 26972577 26972773 -226283810 + MER20 DNA MER1_type 2 218 -1 200 353 20 29 chr2 26972941 26973043 -226283540 + L2 LINE L2 3159 3259 -13 235 371 60 18 chr2 26973120 26973287 -226283296 - L2 LINE L2 -107 3165 2992 488 288 49 18 chr2 26974506 26974669 -226281914 + MIR3 SINE MIR 23 190 -18 186 333 201 0 chr2 26974829 26974973 -226281610 + MIR SINE MIR 75 247 -15 313 294 89 41 chr2 26975575 26975721 -226280862 + MIR3 SINE MIR 18 170 -38 381 181 39 102 chr2 26975760 26975843 -226280740 + MER5B DNA MER1_type 39 113 -65 2011 127 7 3 chr2 26975843 26976135 -226280448 - AluSx SINE Alu -17 295 3 381 181 39 102 chr2 26976135 26976178 -226280405 + MER5B DNA MER1_type 113 157 -21 233 208 21 0 chr2 26976546 26976594 -226279989 - L2 LINE L2 -1 3271 3223 2030 119 0 20 chr2 26976649 26976951 -226279632 - AluSx SINE Alu -16 296 1 201 39 0 0 chr2 26976987 26977013 -226279570 + (GA)n Simple_repeat Simple_repeat 2 27 0 238 291 139 46 chr2 26977106 26977304 -226279279 + MIR SINE MIR 1 210 -52 2167 96 20 0 chr2 26977502 26977805 -226278778 - AluSg SINE Alu 0 310 2 290 350 36 21 chr2 26979282 26979476 -226277107 - L2 LINE L2 -581 2733 2537 1078 150 0 0 chr2 26979909 26980076 -226276507 - AluSg/x SINE Alu -2 308 142 400 257 88 47 chr2 26980197 26980368 -226276215 + MIR SINE MIR 72 249 -13 279 209 70 43 chr2 26981231 26981346 -226275237 - L1ME4a LINE L1 0 6121 6004 252 327 77 12 chr2 26981878 26982046 -226274537 + L3 LINE CR1 1190 1368 -209 334 304 105 29 chr2 26982761 26982932 -226273651 - MIR SINE MIR -3 259 76 351 44 0 0 chr2 26985428 26985473 -226271110 + (CA)n Simple_repeat Simple_repeat 2 46 0 418 291 64 22 chr2 26985524 26985727 -226270856 - MIR SINE MIR -56 206 3 2123 96 34 0 chr2 26986733 26987026 -226269557 + AluSx SINE Alu 1 303 -9 409 347 94 36 chr2 26988649 26988926 -226267657 - L3b LINE CR1 -154 1429 1137 216 268 52 62 chr2 26988984 26989081 -226267502 - L2 LINE L2 -458 2856 2761 236 277 119 20 chr2 26989323 26989424 -226267159 + L2 LINE L2 2906 3016 -256 226 289 12 54 chr2 26989700 26989861 -226266722 + MIR SINE MIR 91 241 -21 225 359 86 0 chr2 26992820 26992937 -226263646 - MIR SINE MIR -10 252 126 243 262 128 74 chr2 26994641 26994790 -226261793 - MIR3 SINE MIR -14 194 38 332 268 116 9 chr2 26995156 26995268 -226261315 - MIR SINE MIR -110 152 29 192 77 0 0 chr2 26995418 26995444 -226261139 + (TG)n Simple_repeat Simple_repeat 1 26 0 216 220 80 0 chr2 26996757 26996807 -226259776 - MIR SINE MIR -62 146 93 490 297 195 5 chr2 26997417 26997612 -226258971 - MIR SINE MIR -11 251 20 182 286 80 114 chr2 26997674 26997849 -226258734 + MIR3 SINE MIR 33 201 -7 447 248 252 9 chr2 26998232 26998442 -226258141 - MIR SINE MIR 0 262 2 537 289 49 36 chr2 26999667 26999892 -226256691 + MIR SINE MIR 15 242 -20 187 300 146 9 chr2 26999926 27000036 -226256547 + L2 LINE L2 3147 3271 -1 325 239 150 9 chr2 27000235 27000348 -226256235 - MIR3 SINE MIR -19 189 61 402 134 15 0 chr2 27000867 27000934 -226255649 - MER5A DNA MER1_type 0 189 122 506 250 86 8 chr2 27000946 27001074 -226255509 + MER63 DNA MER1_type 3 766 -70 599 153 42 0 chr2 27001104 27001222 -226255361 - MER5A DNA MER1_type -66 123 1 186 279 70 0 chr2 27001609 27001695 -226254888 - L3 LINE CR1 -49 1528 1437 355 231 67 10 chr2 27002808 27002912 -226253671 + MIR SINE MIR 20 129 -79 234 238 48 16 chr2 27003793 27003856 -226252727 - L2 LINE L2 0 3313 3249 1865 164 0 3 chr2 27004335 27004640 -226251943 + AluSx SINE Alu 1 304 -8 348 338 86 0 chr2 27004874 27005025 -226251558 + MIR3 SINE MIR 36 199 -9 359 280 175 7 chr2 27005385 27005528 -226251055 - L3 LINE CR1 -1 1576 1410 336 260 0 39 chr2 27005651 27005755 -226250828 + L2 LINE L2 3170 3269 -3 712 164 6 22 chr2 27005773 27005914 -226250669 + (TGGA)n Simple_repeat Simple_repeat 1 140 -40 2173 119 0 0 chr2 27005914 27006226 -226250357 + AluSx SINE Alu 1 312 0 712 164 6 22 chr2 27006226 27006267 -226250316 + (TGGA)n Simple_repeat Simple_repeat 140 180 0 446 153 0 10 chr2 27006299 27006397 -226250186 + (TGGA)n Simple_repeat Simple_repeat 1 97 0 219 343 37 9 chr2 27006539 27006647 -226249936 - L3 LINE CR1 -606 971 861 687 205 0 0 chr2 27006660 27006777 -226249806 - FLAM_A SINE Alu -15 127 11 375 254 153 25 chr2 27006922 27007040 -226249543 + L2 LINE L2 3181 3313 0 473 265 80 13 chr2 27007047 27007198 -226249385 - MIR SINE MIR -67 195 35 293 345 120 7 chr2 27007872 27008014 -226248569 - MIR SINE MIR -70 192 35 256 369 56 12 chr2 27009159 27009319 -226247264 - MIR SINE MIR 0 262 96 224 140 40 0 chr2 27010503 27010553 -226246030 + (TCTCTG)n Simple_repeat Simple_repeat 4 55 0 397 271 68 8 chr2 27010557 27010675 -226245908 + MER5B DNA MER1_type 1 125 -53 434 271 206 32 chr2 27011096 27011251 -226245332 + MIR SINE MIR 24 205 -57 2078 131 3 0 chr2 27011612 27011918 -226244665 + AluSx SINE Alu 1 307 -5 328 274 104 0 chr2 27012024 27012130 -226244453 - MIR SINE MIR -63 145 29 281 224 0 45 chr2 27012265 27012332 -226244251 - L2 LINE L2 -14 3258 3195 2178 151 0 20 chr2 27012773 27013117 -226243466 + MER1B DNA MER1_type 1 337 0 260 82 0 41 chr2 27013219 27013268 -226243315 + (TCTCTG)n Simple_repeat Simple_repeat 2 48 0 368 192 26 13 chr2 27013327 27013405 -226243178 + MIR3 SINE MIR 91 169 -39 224 247 247 10 chr2 27013586 27013683 -226242900 - L2 LINE L2 0 3272 3153 209 247 65 13 chr2 27013797 27013874 -226242709 + L2 LINE L2 3122 3202 -70 186 234 31 47 chr2 27013961 27014025 -226242558 + MIR SINE MIR 187 249 -13 208 333 10 62 chr2 27014454 27014550 -226242033 - MIR SINE MIR -66 196 106 232 253 48 12 chr2 27015050 27015133 -226241450 + MIR SINE MIR 45 130 -132 372 224 82 10 chr2 27015237 27015335 -226241248 - MER20B DNA MER1_type -622 161 57 218 302 34 54 chr2 27018445 27018594 -226237989 - L2 LINE L2 -1 3271 3126 1975 77 8 0 chr2 27018618 27018877 -226237706 - AluSx SINE Alu -14 298 38 2059 119 7 0 chr2 27018977 27019272 -226237311 - AluSx SINE Alu -15 297 1 491 234 32 8 chr2 27019304 27019428 -226237155 - Charlie4 DNA MER1_type -1678 283 157 487 296 0 22 chr2 27020033 27020168 -226236415 + MIR3 SINE MIR 30 161 -47 215 244 0 0 chr2 27020348 27020393 -226236190 + MIR3 SINE MIR 157 201 -7 1100 116 11 28 chr2 27022186 27022367 -226234216 + AluSg/x SINE Alu 117 294 -18 725 126 0 10 chr2 27022367 27022470 -226234113 - AluJo/FLAM SINE Alu -194 118 17 205 333 0 13 chr2 27022668 27022743 -226233840 - MIR SINE MIR -86 122 49 518 302 36 40 chr2 27023074 27023109 -226233474 - L1MC4a LINE L1 -1879 5929 5895 1765 174 0 19 chr2 27023109 27023419 -226233164 - AluJo SINE Alu -8 304 1 518 302 36 40 chr2 27023419 27023605 -226232978 - L1MC4a LINE L1 -1913 5895 5709 439 249 90 26 chr2 27023781 27023970 -226232613 - L1MC4a LINE L1 -2184 5624 5424 1095 195 27 14 chr2 27023979 27024200 -226232383 - AluJb SINE Alu -88 224 1 836 206 38 0 chr2 27024205 27024389 -226232194 - AluJo SINE Alu -1 311 121 261 305 45 32 chr2 27024389 27024512 -226232071 - L1MC4a LINE L1 -2397 5411 5284 2176 129 2 104 chr2 27024512 27024875 -226231708 - L1MB8 LINE L1 0 6178 5864 1529 167 29 4 chr2 27024875 27025182 -226231401 + AluSx SINE Alu 1 314 0 2176 129 2 104 chr2 27025182 27025259 -226231324 - L1MB8 LINE L1 -314 5864 5781 261 305 45 32 chr2 27025259 27025289 -226231294 - L1MC4a LINE L1 -2524 5284 5256 247 288 11 79 chr2 27025420 27025546 -226231037 - L1P LINE L1 -1074 5072 4960 2125 95 3 30 chr2 27025546 27025851 -226230732 - AluSx SINE Alu -15 297 1 247 288 11 79 chr2 27025851 27025901 -226230682 - L1P LINE L1 -1186 4960 4908 243 249 43 155 chr2 27026062 27026144 -226230439 - L1MC5 LINE L1 -48 7913 7823 2189 113 3 0 chr2 27026144 27026453 -226230130 + AluSx SINE Alu 1 310 -2 243 249 43 155 chr2 27026453 27026524 -226230059 - L1MC5 LINE L1 -138 7823 7746 6412 112 6 44 chr2 27026524 27027531 -226229052 + LTR5 LTR ERVK 1 969 0 243 249 43 155 chr2 27027531 27027555 -226229028 - L1MC5 LINE L1 -215 7746 7721 1574 162 3 55 chr2 27027555 27027882 -226228701 - AluJb SINE Alu -2 310 1 243 249 43 155 chr2 27027882 27027979 -226228604 - L1MC5 LINE L1 -240 7721 7668 2224 181 116 13 chr2 27027981 27028439 -226228144 + MLT1D LTR MaLR 1 505 0 1939 118 42 7 chr2 27028507 27028795 -226227788 - AluJb SINE Alu -14 298 1 312 281 62 0 chr2 27028944 27029072 -226227511 + MIR3 SINE MIR 62 197 -11 797 169 0 0 chr2 27029163 27029281 -226227302 + FLAM_C SINE Alu 1 118 -15 26 50 0 0 chr2 27029281 27029321 -226227262 + AT_rich Low_complexity Low_complexity 1 40 0 571 207 45 34 chr2 27029547 27029630 -226226953 + MER53 DNA DNA 2 83 -106 3215 113 20 73 chr2 27029630 27029781 -226226802 - LTR26B LTR ERV1 -1 530 372 1682 155 33 7 chr2 27029781 27030084 -226226499 - AluJo SINE Alu -1 311 1 3215 113 20 73 chr2 27030084 27030304 -226226279 - LTR26B LTR ERV1 -159 372 196 1682 152 33 7 chr2 27030304 27030580 -226226003 - AluJb SINE Alu -9 303 21 3215 113 20 73 chr2 27030580 27030767 -226225816 - LTR26B LTR ERV1 -335 196 1 571 207 45 34 chr2 27030767 27030862 -226225721 + MER53 DNA DNA 83 182 -7 2055 142 0 0 chr2 27030934 27031229 -226225354 + AluSx SINE Alu 1 295 -17 1861 137 33 23 chr2 27031313 27031619 -226224964 + AluSx SINE Alu 4 312 0 182 233 82 14 chr2 27031911 27031984 -226224599 - L2 LINE L2 -59 3213 3136 265 289 59 19 chr2 27032456 27032563 -226224020 - MIR SINE MIR -65 143 51 2289 75 20 0 chr2 27032828 27033120 -226223463 + AluSx SINE Alu 3 300 -12 1857 100 100 14 chr2 27033478 27033708 -226222875 + LTR24C LTR ERV1 1 276 -359 2207 99 3 3 chr2 27033708 27034002 -226222581 - AluSx SINE Alu -18 294 1 1857 100 100 14 chr2 27034002 27034142 -226222441 + LTR24C LTR ERV1 276 403 -232 2921 158 73 8 chr2 27034285 27034804 -226221779 - MER41A LTR ERV1 0 554 2 214 264 92 0 chr2 27035001 27035088 -226221495 + L2 LINE L2 2939 3033 -239 214 316 94 8 chr2 27035308 27035425 -226221158 + L2 LINE L2 3182 3308 -5 263 114 0 2 chr2 27035842 27036078 -226220505 + AluSx SINE Alu 1 293 -8 252 293 57 57 chr2 27036173 27036313 -226220270 + L2 LINE L2 2910 3049 -223 1526 177 30 7 chr2 27036478 27036749 -226219834 - AluJo SINE Alu -29 283 7 2020 135 0 7 chr2 27036789 27037085 -226219498 + AluSx SINE Alu 3 296 -16 2117 148 45 5 chr2 27037092 27037511 -226219072 - LTR56 LTR ERV1 -2 443 8 4310 113 29 0 chr2 27037576 27038193 -226218390 + MER41B LTR ERV1 1 635 0 2011 102 7 7 chr2 27038304 27038587 -226217996 - AluSp SINE Alu -30 283 1 1709 197 3 3 chr2 27038587 27038887 -226217696 - AluSx SINE Alu -12 300 1 1916 80 9 49 chr2 27038917 27039196 -226217387 + MER4E LTR ERV1 1 267 -512 2074 83 31 14 chr2 27039196 27039486 -226217097 + AluSg SINE Alu 1 295 -15 1916 80 9 49 chr2 27039486 27039532 -226217051 + MER4E LTR ERV1 267 313 -466 1415 70 74 0 chr2 27039543 27039758 -226216825 + MER4E LTR ERV1 536 766 0 299 345 43 22 chr2 27039847 27039986 -226216597 + MIR3 SINE MIR 2 143 -65 2268 97 0 3 chr2 27040289 27040600 -226215983 + AluSx SINE Alu 1 310 -2 229 243 129 0 chr2 27041725 27041795 -226214788 - L2 LINE L2 -842 2472 2394 281 54 0 0 chr2 27041985 27042022 -226214561 - AluSp/q SINE Alu -35 268 232 202 320 57 66 chr2 27042022 27042144 -226214439 - L2 LINE L2 -37 3235 3115 2146 120 3 0 chr2 27042813 27043114 -226213469 + AluSx SINE Alu 1 302 -10 734 289 44 18 chr2 27043196 27043421 -226213162 - MIR SINE MIR -20 242 12 329 302 134 13 chr2 27043465 27043614 -226212969 - MIR3 SINE MIR -21 187 21 755 137 32 8 chr2 27044224 27044348 -226212235 + FLAM_C SINE Alu 1 127 -16 21 0 0 0 chr2 27044348 27044369 -226212214 + AT_rich Low_complexity Low_complexity 1 21 0 324 221 117 0 chr2 27044747 27044824 -226211759 + MIR3 SINE MIR 93 178 -30 2076 98 27 10 chr2 27044855 27045152 -226211431 - AluY SINE Alu -9 302 1 1755 150 49 0 chr2 27045152 27045438 -226211145 - AluJo SINE Alu -12 300 1 1849 170 0 7 chr2 27046618 27046924 -226209659 + AluJb SINE Alu 1 304 -8 2036 153 0 0 chr2 27046931 27047239 -226209344 + AluSx SINE Alu 1 308 -4 27 0 0 0 chr2 27047812 27047839 -226208744 + AT_rich Low_complexity Low_complexity 1 27 0 887 147 0 0 chr2 27048185 27048314 -226208269 + FLAM_C SINE Alu 5 133 0 438 346 257 10 chr2 27048869 27049262 -226207321 + L3 LINE CR1 803 1292 -285 300 381 19 12 chr2 27049336 27049496 -226207087 + MER117 DNA MER1_type 33 193 -4 738 182 6 50 chr2 27049604 27049714 -226206869 - Charlie4 DNA MER1_type 0 1961 1861 2228 76 10 10 chr2 27049714 27050017 -226206566 + AluY SINE Alu 1 303 -8 738 182 6 50 chr2 27050017 27050087 -226206496 - Charlie4 DNA MER1_type -100 1861 1789 337 281 8 11 chr2 27050854 27050982 -226205601 - MIR SINE MIR -79 183 17 502 318 112 33 chr2 27052482 27052903 -226203680 + L2 LINE L2 2819 3272 0 261 98 0 0 chr2 27053764 27053805 -226202778 + (TG)n Simple_repeat Simple_repeat 1 41 0 2190 122 0 0 chr2 27055545 27055848 -226200735 - AluSx SINE Alu -9 303 1 276 149 0 0 chr2 27056953 27057000 -226199583 + (CACG)n Simple_repeat Simple_repeat 4 50 0 213 299 23 69 chr2 27058969 27059056 -226197527 - L2 LINE L2 -1 3271 3189 410 279 95 0 chr2 27059752 27059910 -226196673 - MIR3 SINE MIR -3 205 33 229 154 0 0 chr2 27059934 27059973 -226196610 - L2 LINE L2 -24 3248 3210 498 108 0 0 chr2 27059985 27060059 -226196524 + (TTCTCC)n Simple_repeat Simple_repeat 6 79 0 2195 95 7 3 chr2 27060064 27060358 -226196225 - AluSx SINE Alu -17 295 1 570 244 131 0 chr2 27060547 27060715 -226195868 + MIR SINE MIR 19 208 -54 1703 244 32 30 chr2 27061396 27061691 -226194892 + MER63B DNA MER1_type 1 299 -763 1792 156 50 0 chr2 27061691 27061973 -226194610 - AluJo SINE Alu -16 296 1 1703 244 32 30 chr2 27061973 27062112 -226194471 + MER63B DNA MER1_type 299 436 0 2399 122 27 11 chr2 27062122 27062491 -226194092 + THE1C LTR MaLR 1 375 0 510 268 35 0 chr2 27062720 27062862 -226193721 - MER5B DNA MER1_type -25 153 7 2126 107 43 0 chr2 27063714 27064013 -226192570 + AluSx SINE Alu 1 312 0 211 296 0 0 chr2 27065368 27065412 -226191171 - L2 LINE L2 -6 3266 3223 197 318 139 0 chr2 27065522 27065651 -226190932 - L2 LINE L2 -212 3060 2914 231 313 16 0 chr2 27066500 27066564 -226190019 + L2 LINE L2 3201 3265 -7 387 265 5 0 chr2 27066579 27066699 -226189884 - HAL1b LINE L1 -44 6077 1194 312 48 0 0 chr2 27066699 27066741 -226189842 - 5S rRNA rRNA -79 42 1 1906 275 37 36 chr2 27066796 27067527 -226189056 - HAL1b LINE L1 -170 1178 447 486 328 238 12 chr2 27069330 27069915 -226186668 - L2 LINE L2 -784 2530 1814 189 303 172 20 chr2 27070325 27070424 -226186159 - MIR3 SINE MIR -2 206 93 798 160 0 15 chr2 27070654 27070785 -226185798 - FLAM_C SINE Alu -10 133 5 185 337 47 12 chr2 27072221 27072307 -226184276 - MIR SINE MIR -66 196 108 189 362 0 29 chr2 27073451 27073556 -226183027 - MIR SINE MIR -64 144 43 263 333 14 16 chr2 27073875 27074088 -226182495 - MIR SINE MIR -7 255 1 650 298 17 6 chr2 27074867 27075048 -226181535 - MIR SINE MIR -71 191 9 203 360 72 14 chr2 27076572 27076711 -226179872 + L3 LINE CR1 1164 1310 -267 452 273 197 10 chr2 27079053 27079251 -226177332 - MIR SINE MIR 0 262 28 324 241 36 45 chr2 27079327 27079439 -226177144 + MIR3 SINE MIR 3 113 -95 226 118 78 20 chr2 27080546 27080597 -226175986 - MIR SINE MIR -29 233 180 915 264 155 28 chr2 27080640 27081595 -226174988 + L2 LINE L2 2169 3311 -2 303 250 33 43 chr2 27081597 27081689 -226174894 - MIR SINE MIR -158 104 14 673 258 18 0 chr2 27081706 27081873 -226174710 + MLT1J LTR MaLR 54 223 -288 2535 52 3 0 chr2 27082006 27082297 -226174286 + AluY SINE Alu 17 308 -3 231 279 0 0 chr2 27082370 27082438 -226174145 + MLT1J LTR MaLR 441 508 -3 485 221 29 0 chr2 27082440 27082544 -226174039 + MIR SINE MIR 112 218 -44 189 219 219 14 chr2 27082830 27082903 -226173680 - MIR SINE MIR -63 145 58 1400 44 0 6 chr2 27083937 27084118 -226172465 + (TTC)n Simple_repeat Simple_repeat 1 180 0 675 195 12 6 chr2 27084119 27084288 -226172295 + CT-rich Low_complexity Low_complexity 1 170 0 2203 128 3 0 chr2 27084288 27084586 -226171997 - AluSq SINE Alu -14 299 1 695 296 12 83 chr2 27084602 27085025 -226171558 + MLT1J LTR MaLR 26 418 -93 389 256 21 89 chr2 27085102 27085293 -226171290 + MER5B DNA MER1_type 1 178 0 401 247 21 0 chr2 27085347 27085440 -226171143 - MER5A DNA MER1_type -80 109 15 2108 222 69 27 chr2 27086520 27087084 -226169499 + MLT1E LTR MaLR 3 590 -3 1094 227 23 15 chr2 27087428 27087850 -226168733 - L1ME LINE L1 -4904 2053 1534 1600 210 59 2 chr2 27087852 27088263 -226168320 + MLT2B1 LTR ERVL 1 480 -40 255 61 0 0 chr2 27088272 27088305 -226168278 + (TG)n Simple_repeat Simple_repeat 2 34 0 354 343 0 9 chr2 27088305 27088413 -226168170 - L1MC4 LINE L1 -1341 6701 6595 348 138 0 12 chr2 27088416 27088488 -226168095 + MLT2B1 LTR ERVL 386 520 0 1673 248 84 64 chr2 27088489 27089228 -226167355 - L1ME LINE L1 -5310 1637 884 183 80 0 0 chr2 27089298 27089323 -226167260 - MIR SINE MIR -67 141 117 493 185 74 9 chr2 27089672 27089780 -226166803 - MIR3 SINE MIR -5 203 89 599 224 75 17 chr2 27090481 27090655 -226165928 + Charlie7 DNA MER1_type 385 568 -2044 180 0 0 0 chr2 27090861 27090881 -226165702 + (CA)n Simple_repeat Simple_repeat 1 20 0 4298 232 114 19 chr2 27090970 27091413 -226165170 + Charlie7 DNA MER1_type 998 1397 -1215 2326 92 0 10 chr2 27091413 27091718 -226164865 + AluSq SINE Alu 1 302 -11 4298 232 114 19 chr2 27091718 27092729 -226163854 + Charlie7 DNA MER1_type 1397 2591 -21 297 250 158 0 chr2 27092729 27092849 -226163734 - MIR3 SINE MIR -51 157 19 2194 116 0 13 chr2 27092968 27093278 -226163305 + AluSx SINE Alu 1 306 -6 2411 96 0 0 chr2 27094742 27095035 -226161548 + AluSc SINE Alu 1 293 -16 2161 103 7 3 chr2 27095071 27095388 -226161195 + AluSx SINE Alu 2 319 0 787 257 49 13 chr2 27095669 27095895 -226160688 + L1MC3 LINE L1 4509 4742 -1404 1134 186 51 5 chr2 27095895 27096110 -226160473 + AluJo SINE Alu 1 225 -87 270 0 0 0 chr2 27096172 27096202 -226160381 + (TA)n Simple_repeat Simple_repeat 2 31 0 1404 239 31 18 chr2 27096217 27096668 -226159915 + L1MC3 LINE L1 4755 5211 -935 * 2170 234 80 67 chr2 27096667 27097581 -226159002 + L1MC3 LINE L1 5735 6660 -1125 1810 189 39 61 chr2 27097586 27097712 -226158871 + L1MD3 LINE L1 7416 7543 -452 1513 170 51 4 chr2 27097712 27097988 -226158595 + AluJo SINE Alu 1 289 -23 1810 189 39 61 chr2 27097988 27098322 -226158261 + L1MD3 LINE L1 7543 7866 -129 250 203 0 34 chr2 27098349 27098408 -226158175 - L1MD3 LINE L1 -53 7942 7886 625 260 13 4 chr2 27098433 27098660 -226157923 + L1MEc LINE L1 660 888 -5508 1907 158 0 17 chr2 27098661 27098959 -226157624 + AluJb SINE Alu 15 307 -5 885 314 27 36 chr2 27098962 27099029 -226157554 + L1MEc LINE L1 1388 1454 -4942 2142 148 0 0 chr2 27099029 27099340 -226157243 + AluJo SINE Alu 1 311 -1 885 314 27 36 chr2 27099340 27099747 -226156836 + L1MEc LINE L1 1454 1858 -4538 * 1237 239 59 20 chr2 27099741 27100223 -226156360 + L1MEc LINE L1 2586 3114 -3101 378 241 45 9 chr2 27102473 27102585 -226153998 + MIR SINE MIR 111 226 -36 2316 102 0 10 chr2 27102886 27103189 -226153394 + AluSx SINE Alu 1 300 -12 247 403 0 15 chr2 27103299 27103433 -226153150 + MER5B DNA MER1_type 13 144 -34 416 372 76 14 chr2 27105616 27105839 -226150744 - MIR SINE MIR -6 256 20 462 300 67 22 chr2 27106193 27106373 -226150210 + L3 LINE CR1 439 626 -951 596 280 98 44 chr2 27106562 27106837 -226149746 + L1ME4a LINE L1 5645 5934 -187 286 310 171 12 chr2 27108076 27108334 -226148249 - L3 LINE CR1 -100 1477 1179 292 271 9 65 chr2 27108471 27108578 -226148005 - MIR SINE MIR -44 218 118 202 318 34 0 chr2 27109505 27109593 -226146990 + MIR SINE MIR 56 146 -62 224 330 57 0 chr2 27109691 27109779 -226146804 - MIR SINE MIR -77 185 93 290 292 21 52 chr2 27109958 27110102 -226146481 + MIR SINE MIR 16 156 -62 344 340 27 27 chr2 27110395 27110545 -226146038 - MIR3 SINE MIR -43 165 16 195 314 49 0 chr2 27110557 27110659 -226145924 - MIR SINE MIR -96 166 60 302 315 30 36 chr2 27110967 27111132 -226145451 + MIR SINE MIR 67 230 -32 207 169 108 62 chr2 27111976 27112041 -226144542 - MIR SINE MIR -63 145 78 252 0 0 0 chr2 27112050 27112078 -226144505 + (TG)n Simple_repeat Simple_repeat 1 28 0 494 266 36 7 chr2 27112339 27112478 -226144105 + MIR SINE MIR 79 221 -41 292 340 0 42 chr2 27112824 27112968 -226143615 + MIR3 SINE MIR 3 140 -68 1848 155 3 48 chr2 27113220 27113529 -226143054 - AluJb SINE Alu -17 295 1 577 308 37 27 chr2 27114424 27114723 -226141860 + HAL1 LINE L1 1 302 -2205 251 279 25 0 chr2 27114958 27115037 -226141546 + HAL1 LINE L1 199 279 -2228 282 228 38 13 chr2 27115042 27115121 -226141462 + HAL1 LINE L1 199 279 -2228 3833 234 139 100 chr2 27115126 27116348 -226140235 + HAL1 LINE L1 199 1372 -1135 800 194 0 0 chr2 27116348 27116482 -226140101 + AluJo SINE Alu 1 134 -178 3833 234 139 100 chr2 27116482 27117009 -226139574 + HAL1 LINE L1 1372 1877 -630 2341 98 0 0 chr2 27117009 27117321 -226139262 + AluSx SINE Alu 1 312 0 3833 234 139 100 chr2 27117321 27117555 -226139028 + HAL1 LINE L1 1877 2400 -107 29 40 0 40 chr2 27117601 27117631 -226138952 + AT_rich Low_complexity Low_complexity 1 31 -42 2221 129 0 0 chr2 27117631 27117966 -226138617 + AluSx SINE Alu 1 312 0 29 40 0 40 chr2 27117966 27117992 -226138591 + AT_rich Low_complexity Low_complexity 31 57 -16 1833 184 3 0 chr2 27117992 27118303 -226138280 + AluJb SINE Alu 1 312 0 29 40 0 40 chr2 27118303 27118320 -226138263 + AT_rich Low_complexity Low_complexity 57 73 0 24 32 0 0 chr2 27119492 27119523 -226137060 + AT_rich Low_complexity Low_complexity 1 31 0 1611 62 48 140 chr2 27119644 27119980 -226136603 + L1MA1 LINE L1 5990 6294 -8 222 310 0 0 chr2 27120144 27120215 -226136368 - L3 LINE CR1 -156 1421 1351 2491 81 3 0 chr2 27120278 27120576 -226136007 - AluSp SINE Alu -10 303 5 2611 142 4 9 chr2 27120632 27121090 -226135493 - L1P LINE L1 -962 5184 4729 438 210 66 18 chr2 27121358 27121525 -226135058 + L1ME4a LINE L1 5946 6120 -1 345 230 56 112 chr2 27122204 27122365 -226134218 + MIR3 SINE MIR 56 207 -1 201 128 26 26 chr2 27123314 27123353 -226133230 - MIR SINE MIR -118 144 106 209 180 229 0 chr2 27124742 27124803 -226131780 - MIR3 SINE MIR -10 198 124 398 288 21 0 chr2 27125275 27125432 -226131151 + MIR SINE MIR 33 190 -61 595 305 52 5 chr2 27125502 27125715 -226130868 + MIR SINE MIR 15 237 -25 1879 172 3 0 chr2 27126113 27126409 -226130174 + AluJo SINE Alu 1 297 -15 267 243 14 0 chr2 27126618 27126688 -226129895 + LTR33 LTR ERVL 51 121 -400 2219 128 0 3 chr2 27127394 27127706 -226128877 + AluSx SINE Alu 1 311 -1 304 206 55 0 chr2 27127743 27127816 -226128767 - MER97a DNA MER1_type? -718 176 100 418 274 48 8 chr2 27127961 27128085 -226128498 - MIR SINE MIR -82 180 52 443 298 47 53 chr2 27128175 27128346 -226128237 - MIR SINE MIR -43 219 50 318 281 70 0 chr2 27128759 27128887 -226127696 + MIR3 SINE MIR 66 202 -6 294 315 73 30 chr2 27128947 27129112 -226127471 - MER5B DNA MER1_type -1 177 6 386 245 20 19 chr2 27129241 27129360 -226127223 + MIR SINE MIR 38 154 -58 592 318 16 24 chr2 27129367 27129619 -226126964 - MIR SINE MIR 0 262 13 472 295 174 9 chr2 27130240 27130464 -226126119 - L3 LINE CR1 -871 706 446 2225 250 91 54 chr2 27130792 27131889 -226124694 - HAL1 LINE L1 -7 2500 1363 282 273 13 0 chr2 27131885 27131962 -226124621 - HAL1 LINE L1 -1638 869 792 * 272 234 168 105 chr2 27131963 27132391 -226124192 - HAL1 LINE L1 -1989 518 64 349 275 58 0 chr2 27132440 27132578 -226124005 - L1MC4a LINE L1 -1915 5893 5748 2134 115 3 26 chr2 27133588 27133901 -226122682 + AluSx SINE Alu 1 306 -6 1958 53 0 8 chr2 27134112 27134356 -226122227 - L1PA7 LINE L1 0 6154 5913 266 104 0 21 chr2 27135006 27135054 -226121529 + (GGGA)n Simple_repeat Simple_repeat 2 48 0 1648 72 36 5 chr2 27135863 27136086 -226120497 - MER30 DNA MER1_type 0 230 1 807 207 186 0 chr2 27136517 27136710 -226119873 + MIR SINE MIR 31 259 -3 1699 158 49 3 chr2 27136723 27137007 -226119576 + AluSx SINE Alu 1 297 -15 1116 133 0 0 chr2 27137041 27137199 -226119384 + FRAM SINE Alu 16 173 -3 381 268 24 49 chr2 27137307 27137471 -226119112 - LTR33 LTR ERVL -3 518 359 180 372 0 12 chr2 27137857 27137943 -226118640 - L2 LINE L2 -1 3271 3187 183 80 0 0 chr2 27137989 27138014 -226118569 + (A)n Simple_repeat Simple_repeat 1 25 0 285 98 0 0 chr2 27138025 27138066 -226118517 + (CA)n Simple_repeat Simple_repeat 1 41 0 585 262 89 44 chr2 27138194 27138419 -226118164 + MIR SINE MIR 14 248 -14 1612 130 0 0 chr2 27138428 27138644 -226117939 + AluSg/x SINE Alu 82 297 -13 2319 111 0 0 chr2 27138681 27138979 -226117604 + AluSq SINE Alu 1 298 -15 272 269 37 46 chr2 27139313 27139421 -226117162 - MER113 DNA MER1_type? -100 421 315 191 283 50 0 chr2 27139492 27139552 -226117031 - L2 LINE L2 -47 3225 3163 685 202 50 28 chr2 27139749 27139967 -226116616 - MER113 DNA MER1_type? -262 259 37 300 111 0 0 chr2 27139967 27140021 -226116562 + (TC)n Simple_repeat Simple_repeat 1 54 0 4771 180 23 11 chr2 27140622 27140858 -226115725 + L1MB7 LINE L1 5254 5486 -698 2189 142 0 0 chr2 27140858 27141169 -226115414 + AluJb SINE Alu 2 312 0 4771 180 23 11 chr2 27141169 27141848 -226114735 + L1MB7 LINE L1 5486 6180 -4 2151 141 0 0 chr2 27143758 27144062 -226112521 + AluSq SINE Alu 1 304 -9 401 262 138 7 chr2 27144241 27144386 -226112197 - MIR3 SINE MIR -9 199 36 208 175 0 0 chr2 27144509 27144549 -226112034 - MIR SINE MIR -134 74 35 928 283 110 55 chr2 27144725 27145751 -226110832 - L2 LINE L2 0 3272 2174 287 161 65 16 chr2 27145753 27145815 -226110768 - L2 LINE L2 -70 3243 3179 246 271 108 16 chr2 27146596 27146725 -226109858 + L1M3de LINE L1 1668 1808 -4845 526 290 115 19 chr2 27148225 27148539 -226108044 + L2 LINE L2 2541 2884 -430 259 313 109 20 chr2 27148715 27148862 -226107721 - MIR3 SINE MIR -46 162 3 252 0 0 0 chr2 27149718 27149746 -226106837 + (GA)n Simple_repeat Simple_repeat 1 28 0 213 39 0 0 chr2 27149994 27150020 -226106563 + (GGGA)n Simple_repeat Simple_repeat 3 28 0 1371 62 0 0 chr2 27150020 27150198 -226106385 + (GGAA)n Simple_repeat Simple_repeat 1 178 0 237 196 0 0 chr2 27150198 27150249 -226106334 + GA-rich Low_complexity Low_complexity 1 51 0 857 145 0 43 chr2 27150981 27151119 -226105464 - FLAM_C SINE Alu 0 133 2 3011 6 0 0 chr2 27151130 27151447 -226105136 - AluYb8 SINE Alu -1 317 1 909 125 7 13 chr2 27151481 27151633 -226104950 + L1PB2 LINE L1 5999 6149 -2 290 300 8 50 chr2 27151831 27151900 -226104683 + L3 LINE CR1 1127 1190 -387 2402 92 0 0 chr2 27151900 27152192 -226104391 - AluSc SINE Alu -14 295 4 290 300 8 50 chr2 27152192 27152242 -226104341 + L3 LINE CR1 1190 1241 -336 644 238 100 128 chr2 27152246 27152848 -226103735 - MLT1K LTR MaLR -2 586 2 223 306 65 86 chr2 27152894 27153126 -226103457 + L2 LINE L2 2704 2930 -384 2337 101 0 0 chr2 27153269 27153565 -226103018 + AluSx SINE Alu 1 296 -16 228 216 39 29 chr2 27154626 27154728 -226101855 + L1MEd LINE L1 83 185 -5934 428 284 63 55 chr2 27154795 27155049 -226101534 + L1MEd LINE L1 646 901 -5218 1594 219 28 14 chr2 27155054 27155584 -226100999 - L1MEc LINE L1 -3605 2610 2116 655 308 76 34 chr2 27155595 27155782 -226100801 - L1MC4a LINE L1 -1942 5866 5688 1949 196 0 0 chr2 27155782 27156094 -226100489 - AluSx SINE Alu 0 312 1 655 308 76 34 chr2 27156094 27156263 -226100320 - L1MC4a LINE L1 -2120 5688 5495 444 112 45 0 chr2 27156277 27156366 -226100217 + CT-rich Low_complexity Low_complexity 4 96 0 243 236 106 50 chr2 27156404 27156488 -226100095 - L1MC4a LINE L1 -2381 5427 5349 1934 138 53 76 chr2 27156488 27156588 -226099995 + MLT1B LTR MaLR 3 104 -286 2241 125 6 0 chr2 27156588 27156899 -226099684 - AluSq SINE Alu 0 313 1 1934 138 53 76 chr2 27156899 27157195 -226099388 + MLT1B LTR MaLR 104 390 0 243 236 106 50 chr2 27157195 27157271 -226099312 - L1MC4a LINE L1 -2459 5349 5258 2222 99 0 49 chr2 27157278 27157602 -226098981 + AluSg SINE Alu 2 309 -1 373 280 45 30 chr2 27157620 27157752 -226098831 + MER94 DNA DNA 1 134 0 3752 181 20 24 chr2 27157799 27158583 -226098000 - L1MC2 LINE L1 -2 6342 5562 1126 123 12 6 chr2 27158590 27158753 -226097830 + AluSg/x SINE Alu 123 286 -24 4491 200 51 65 chr2 27158763 27159745 -226096838 - L1MC2 LINE L1 -743 5403 4629 5581 60 17 14 chr2 27159745 27160460 -226096123 - SVA Other Other -1 1385 669 4491 200 51 65 chr2 27160460 27161051 -226095532 - L1MC2 LINE L1 -1517 4629 4032 24 32 0 0 chr2 27161085 27161116 -226095467 + AT_rich Low_complexity Low_complexity 1 31 0 373 271 52 66 chr2 27161119 27161143 -226095440 - L1MC4a LINE L1 -1007 5139 5116 2492 77 0 0 chr2 27161143 27161442 -226095141 - AluY SINE Alu -12 299 1 373 271 52 66 chr2 27161442 27161597 -226094986 - L1MC4a LINE L1 -1030 5116 4957 852 296 69 13 chr2 27161748 27162066 -226094517 + LTR16B LTR ERVL 129 464 0 372 293 70 22 chr2 27162544 27162817 -226093766 - L1MC4a LINE L1 -1326 4820 4535 508 266 62 50 chr2 27162951 27163210 -226093373 - L2 LINE L2 -187 3085 2824 380 310 96 83 chr2 27163248 27163370 -226093213 - MIR SINE MIR -30 232 104 1525 148 48 41 chr2 27163370 27163640 -226092943 + AluJo SINE Alu 25 296 -16 380 310 96 83 chr2 27163640 27163746 -226092837 - MIR SINE MIR -158 104 1 266 296 14 0 chr2 27164075 27164146 -226092437 - L2 LINE L2 0 3272 3201 330 182 0 0 chr2 27164336 27164402 -226092181 + CT-rich Low_complexity Low_complexity 4 69 0 334 271 35 0 chr2 27164402 27164487 -226092096 - L2 LINE L2 -1 3271 3184 572 256 50 6 chr2 27164727 27164887 -226091696 + MIR SINE MIR 32 198 -64 * 654 239 101 27 chr2 27164886 27165074 -226091509 - L2 LINE L2 -4 3309 3108 360 230 123 70 chr2 27165074 27165261 -226091322 - LTR16A1 LTR ERVL 0 457 261 830 119 8 0 chr2 27165394 27165528 -226091055 + (GGAA)n Simple_repeat Simple_repeat 1 135 0 586 169 8 8 chr2 27165712 27165836 -226090747 + GA-rich Low_complexity Low_complexity 2 125 0 563 263 19 52 chr2 27166180 27166393 -226090190 + MIR3 SINE MIR 3 208 0 693 284 34 5 chr2 27166726 27166930 -226089653 + MER63A DNA MER1_type 1 210 0 224 256 137 77 chr2 27166937 27167054 -226089529 - MIR SINE MIR -119 143 20 314 290 0 83 chr2 27167095 27167240 -226089343 + MIR SINE MIR 21 153 -109 291 341 0 0 chr2 27168026 27168114 -226088469 + (CA)n Simple_repeat Simple_repeat 2 89 0 241 360 33 7 chr2 27169528 27169681 -226086902 - MIR3 SINE MIR -30 178 22 2047 111 68 0 chr2 27170305 27170585 -226085998 + AluSx SINE Alu 1 299 -13 2695 110 30 46 chr2 27171322 27171688 -226084895 + MSTC LTR MaLR 1 360 -68 2320 107 0 3 chr2 27171688 27171997 -226084586 + AluSx SINE Alu 1 308 -4 2695 110 30 46 chr2 27171997 27172065 -226084518 + MSTC LTR MaLR 360 428 0 1297 152 43 0 chr2 27172210 27172420 -226084163 + MER20 DNA MER1_type 1 219 0 1315 267 56 45 chr2 27172473 27173008 -226083575 + LTR67 LTR ERVL 4 544 -13 290 289 102 55 chr2 27174013 27174141 -226082442 - L2 LINE L2 0 3313 3180 292 335 51 47 chr2 27174345 27174560 -226082023 - L2 LINE L2 -382 2932 2717 205 157 20 39 chr2 27174874 27174925 -226081658 + GA-rich Low_complexity Low_complexity 2 51 0 405 243 257 15 chr2 27174959 27175095 -226081488 - MIR3 SINE MIR -24 184 16 231 36 0 0 chr2 27175142 27175170 -226081413 + (TG)n Simple_repeat Simple_repeat 1 28 0 210 257 35 106 chr2 27176349 27176462 -226080121 + MIR3 SINE MIR 104 208 0 209 281 0 18 chr2 27177834 27177891 -226078692 - L2 LINE L2 0 3272 3217 487 291 64 69 chr2 27177956 27178030 -226078553 + MIR SINE MIR 3 76 -186 2179 119 0 22 chr2 27178030 27178349 -226078234 - AluSx SINE Alu 0 312 1 487 291 64 69 chr2 27178349 27178477 -226078106 + MIR SINE MIR 76 204 -58 222 336 19 9 chr2 27178498 27178605 -226077978 - L2 LINE L2 -338 2934 2827 286 213 12 100 chr2 27179392 27179472 -226077111 - MIR SINE MIR -58 150 81 492 315 61 11 chr2 27180075 27180256 -226076327 - MIR3 SINE MIR -15 193 4 189 321 0 0 chr2 27180833 27180889 -226075694 - L2 LINE L2 -10 3262 3207 * 667 305 141 14 chr2 27180886 27181247 -226075336 - L3 LINE CR1 -70 1507 1101 216 67 0 0 chr2 27181450 27181480 -226075103 + (CA)n Simple_repeat Simple_repeat 2 31 0 182 300 190 10 chr2 27181817 27181917 -226074666 + MIR3 SINE MIR 84 201 -7 432 51 0 0 chr2 27182023 27182082 -226074501 + (CA)n Simple_repeat Simple_repeat 1 59 0 245 313 52 10 chr2 27183316 27183412 -226073171 - L2 LINE L2 -20 3252 3153 183 283 19 19 chr2 27183455 27183508 -226073075 - MIR SINE MIR -182 80 28 592 255 32 58 chr2 27183662 27183850 -226072733 - MIR3 SINE MIR -6 202 20 270 323 53 63 chr2 27184294 27184483 -226072100 - L2 LINE L2 -214 3058 2872 278 380 23 0 chr2 27184673 27184802 -226071781 - MIR3 SINE MIR -11 197 66 622 209 16 8 chr2 27185106 27185235 -226071348 + MIR3 SINE MIR 58 187 -21 435 254 244 40 chr2 27185874 27186075 -226070508 + MIR SINE MIR 15 256 -6 267 320 40 0 chr2 27186349 27186449 -226070134 - MIR3 SINE MIR -21 187 84 187 337 23 23 chr2 27186464 27186550 -226070033 - MIR SINE MIR -106 156 71 525 308 41 0 chr2 27186903 27187075 -226069508 + MIR3 SINE MIR 20 198 -10 242 239 26 53 chr2 27187169 27187282 -226069301 + (TCTCTG)n Simple_repeat Simple_repeat 5 114 0 201 139 0 0 chr2 27187358 27187401 -226069182 + (TC)n Simple_repeat Simple_repeat 2 44 0 245 152 25 38 chr2 27187495 27187574 -226069009 + (CGGG)n Simple_repeat Simple_repeat 2 79 0 207 0 0 0 chr2 27187599 27187622 -226068961 + (CGG)n Simple_repeat Simple_repeat 3 25 0 214 201 10 29 chr2 27188752 27188863 -226067720 + (CA)n Simple_repeat Simple_repeat 1 108 0 * 228 35 0 0 chr2 27188862 27188891 -226067692 + (GA)n Simple_repeat Simple_repeat 2 30 0 532 270 26 7 chr2 27188992 27189144 -226067439 + MIR3 SINE MIR 52 206 -2 195 370 55 62 chr2 27190075 27190100 -226066483 + L2 LINE L2 2941 2965 -307 942 195 0 24 chr2 27190100 27190269 -226066314 - FRAM SINE Alu -1 165 1 195 370 55 62 chr2 27190269 27190535 -226066048 + L2 LINE L2 2965 3230 -42 401 313 17 22 chr2 27191131 27191272 -226065311 - MIR SINE MIR -71 137 16 393 269 172 0 chr2 27191619 27191764 -226064819 - MIR3 SINE MIR -3 205 36 580 273 44 24 chr2 27191825 27192030 -226064553 - MIR SINE MIR 0 262 54 1655 143 0 23 chr2 27192100 27192365 -226064218 + AluSx SINE Alu 2 260 -52 294 348 17 9 chr2 27192878 27192993 -226063590 - MIR3 SINE MIR -90 118 3 621 227 119 70 chr2 27193186 27193433 -226063150 + MIR SINE MIR 4 262 0 440 129 0 0 chr2 27193698 27193760 -226062823 + AluS SINE Alu 1 62 -248 2162 128 0 3 chr2 27193779 27194138 -226062445 + AluSx SINE Alu 1 358 0 257 356 61 8 chr2 27194664 27194796 -226061787 - MIR SINE MIR -77 185 47 284 252 114 41 chr2 27194983 27195106 -226061477 - MIR3 SINE MIR -41 167 36 540 45 0 0 chr2 27195599 27195666 -226060917 + (CAT)n Simple_repeat Simple_repeat 3 69 0 213 65 0 0 chr2 27195667 27195698 -226060885 + (TC)n Simple_repeat Simple_repeat 2 32 0 189 307 23 57 chr2 27195699 27195787 -226060796 + MIR SINE MIR 66 150 -112 496 256 143 36 chr2 27195837 27196005 -226060578 - MER5A DNA MER1_type 0 189 4 273 169 77 0 chr2 27196465 27196530 -226060053 - MLT1A2 LTR MaLR 0 374 305 1899 155 7 0 chr2 27196545 27196848 -226059735 + AluSx SINE Alu 2 306 -6 1136 113 0 39 chr2 27196848 27197041 -226059542 - L1PA13 LINE L1 -11 6152 5966 268 210 16 16 chr2 27197041 27197103 -226059480 - MLT1A2 LTR MaLR -123 242 181 948 318 149 16 chr2 27197228 27197578 -226059005 + L3 LINE CR1 1093 1510 -67 1227 270 28 47 chr2 27197578 27197725 -226058858 - MLT2D LTR ERVL 0 414 266 2140 115 0 3 chr2 27197725 27198020 -226058563 + AluSx SINE Alu 1 294 -18 1227 270 28 47 chr2 27198020 27198294 -226058289 - MLT2D LTR ERVL -148 266 1 948 318 149 16 chr2 27198294 27198367 -226058216 + L3 LINE CR1 1510 1572 -5 181 264 62 85 chr2 27198487 27198616 -226057967 - L2 LINE L2 -1 3312 3187 733 218 0 69 chr2 27199785 27199852 -226056731 - MIR SINE MIR -43 219 149 1770 174 27 0 chr2 27199852 27200150 -226056433 - AluJb SINE Alu -6 306 1 733 218 0 69 chr2 27200150 27200256 -226056327 - MIR SINE MIR -113 149 58 276 385 59 0 chr2 27200283 27200418 -226056165 - MIR SINE MIR -74 188 46 216 343 38 29 chr2 27200856 27200961 -226055622 - MER5B DNA MER1_type -65 113 8 214 268 188 18 chr2 27201747 27201859 -226054724 + MIR3 SINE MIR 66 196 -12 245 274 76 96 chr2 27202669 27202826 -226053757 - MIR3 SINE MIR -48 160 7 1924 251 136 76 chr2 27202858 27203285 -226053298 - L2 LINE L2 -25 3288 2888 2209 95 0 19 chr2 27203285 27203600 -226052983 + AluSq SINE Alu 1 309 -4 1924 251 136 76 chr2 27203600 27204615 -226051968 - L2 LINE L2 -425 2888 1764 185 288 208 0 chr2 27204641 27204766 -226051817 - MIR SINE MIR -92 170 20 202 287 17 96 chr2 27206022 27206137 -226050446 + MIR SINE MIR 30 135 -73 920 182 30 5 chr2 27206462 27206660 -226049923 + MIR SINE MIR 60 262 0 282 369 68 5 chr2 27206994 27207200 -226049383 + L3b LINE CR1 1106 1324 -259 288 0 0 0 chr2 27207559 27207591 -226048992 + (TG)n Simple_repeat Simple_repeat 2 33 0 1829 95 48 41 chr2 27208389 27208684 -226047899 + AluSx SINE Alu 1 297 -15 2206 115 3 3 chr2 27208685 27208998 -226047585 + AluSq SINE Alu 1 313 0 249 369 92 8 chr2 27209133 27209263 -226047320 + MIR3 SINE MIR 3 143 -65 434 296 101 13 chr2 27210216 27210375 -226046208 + MIR SINE MIR 35 207 -55 210 71 0 0 chr2 27210628 27210656 -226045927 + (G)n Simple_repeat Simple_repeat 1 28 0 476 306 0 0 chr2 27210670 27210850 -226045733 + G-rich Low_complexity Low_complexity 1 180 0 284 284 55 28 chr2 27211724 27211833 -226044750 + L2 LINE L2 3202 3313 0 2022 100 76 0 chr2 27212224 27212514 -226044069 + AluSx SINE Alu 1 312 0 2165 117 3 3 chr2 27212873 27213182 -226043401 + AluSq SINE Alu 5 313 0 249 369 92 8 chr2 27213318 27213448 -226043135 + MIR3 SINE MIR 3 143 -65 2212 92 0 0 chr2 27213679 27213992 -226042591 + AluSx SINE Alu 1 313 0 192 267 43 60 chr2 27214018 27214134 -226042449 + MIR SINE MIR 26 139 -123 685 276 56 42 chr2 27214204 27214418 -226042165 + MIR SINE MIR 46 262 0 180 158 298 0 chr2 27214453 27214510 -226042073 - L2 LINE L2 -32 3240 3167 475 259 129 0 chr2 27215047 27215194 -226041389 - MIR3 SINE MIR -9 199 34 326 333 73 30 chr2 27215237 27215402 -226041181 + MIR SINE MIR 41 212 -50 251 308 0 0 chr2 27215574 27215652 -226040931 - L2 LINE L2 -215 3057 2980 333 260 17 157 chr2 27215815 27215963 -226040620 - MIR3 SINE MIR -1 207 102 1097 197 22 31 chr2 27215963 27216186 -226040397 + MER58A DNA MER1_type 4 224 0 333 260 17 157 chr2 27216186 27216272 -226040311 - MIR3 SINE MIR -106 102 6 513 275 0 8 chr2 27216945 27217065 -226039518 - L2 LINE L2 -2 3311 3193 227 243 27 27 chr2 27217100 27217201 -226039382 + C-rich Low_complexity Low_complexity 1 101 0 1030 289 66 40 chr2 27217523 27217689 -226038894 - L1ME4a LINE L1 -4 6117 5957 1786 168 3 0 chr2 27217689 27217980 -226038603 - AluJb SINE Alu -20 292 1 1030 289 66 40 chr2 27217980 27218356 -226038227 - L1ME4a LINE L1 -164 5957 5561 343 240 16 58 chr2 27218477 27218598 -226037985 + L2 LINE L2 2970 3085 -187 515 192 19 0 chr2 27218948 27219052 -226037531 + MIR SINE MIR 44 149 -59 1973 114 29 0 chr2 27219057 27219354 -226037229 + AluSx SINE Alu 5 309 0 233 217 0 0 chr2 27221381 27221427 -226035156 - MIR3 SINE MIR -10 198 153 564 251 112 6 chr2 27221452 27221631 -226034952 - MIR SINE MIR -2 260 63 426 218 123 35 chr2 27221951 27222121 -226034462 - MIR3 SINE MIR -23 185 1 672 326 0 5 chr2 27222644 27222834 -226033749 + MIR3 SINE MIR 16 204 -4 317 292 39 15 chr2 27223506 27223636 -226032947 + MIR SINE MIR 85 217 -45 388 251 13 71 chr2 27224400 27224540 -226032043 - MIR3 SINE MIR -49 159 32 670 262 5 32 chr2 27224984 27225143 -226031440 - MIR SINE MIR 0 262 100 195 42 0 0 chr2 27225143 27225167 -226031416 + (CA)n Simple_repeat Simple_repeat 1 24 0 * 279 0 0 0 chr2 27225166 27225197 -226031386 + (GA)n Simple_repeat Simple_repeat 2 32 0 670 262 5 32 chr2 27225167 27225224 -226031359 - MIR SINE MIR -162 100 81 320 215 43 4 chr2 27225598 27225699 -226030884 - MIR SINE MIR -65 143 73 293 321 142 0 chr2 27226209 27226343 -226030240 - MIR3 SINE MIR -34 174 22 193 340 64 11 chr2 27226424 27226518 -226030065 + MIR SINE MIR 34 132 -130 345 251 66 81 chr2 27228407 27228599 -226027984 - MIR3 SINE MIR -1 261 73 2039 137 3 3 chr2 27228599 27228898 -226027685 + AluJb SINE Alu 1 299 -13 345 251 66 81 chr2 27228898 27228960 -226027623 - MIR3 SINE MIR -189 73 12 1869 111 42 29 chr2 27230345 27230652 -226025931 + AluSx SINE Alu 2 312 0 476 301 22 22 chr2 27230754 27230937 -226025646 - MIR3 SINE MIR -22 186 4 461 230 74 20 chr2 27231305 27231453 -226025130 + MER112 DNA MER1_type 99 254 -6 595 213 27 13 chr2 27232360 27232510 -226024073 - MER103 DNA DNA -1 165 14 343 310 70 29 chr2 27232690 27232861 -226023722 - MIR SINE MIR -84 178 1 2369 96 0 0 chr2 27233023 27233335 -226023248 + AluSx SINE Alu 1 312 0 2106 107 0 0 chr2 27233758 27234068 -226022515 - AluSx SINE Alu 0 311 2 201 39 0 0 chr2 27234100 27234126 -226022457 + (CA)n Simple_repeat Simple_repeat 2 27 0 252 379 57 0 chr2 27234128 27234252 -226022331 - MIR3 SINE MIR -43 165 35 252 0 0 0 chr2 27234254 27234282 -226022301 + (CA)n Simple_repeat Simple_repeat 2 29 0 197 253 0 116 chr2 27234577 27234606 -226021977 - MIR SINE MIR -70 192 161 2258 96 0 0 chr2 27234606 27234928 -226021655 + AluSq SINE Alu 1 322 0 197 253 0 116 chr2 27234928 27234992 -226021591 - MIR SINE MIR -101 161 109 1903 159 0 0 chr2 27235835 27236137 -226020446 - AluSx SINE Alu -10 302 1 274 359 28 9 chr2 27236294 27236400 -226020183 - L3 LINE CR1 -857 720 613 2022 90 76 0 chr2 27236608 27236896 -226019687 + AluSg SINE Alu 1 310 0 544 218 75 14 chr2 27237258 27237405 -226019178 - MIR SINE MIR -73 189 34 2171 88 3 7 chr2 27238303 27238597 -226017986 + AluSq SINE Alu 1 293 -20 748 273 87 55 chr2 27238640 27238944 -226017639 + L1ME1 LINE L1 5682 5975 -359 1883 120 10 7 chr2 27238944 27239236 -226017347 + AluJo SINE Alu 1 293 -19 748 273 87 55 chr2 27239236 27239417 -226017166 + L1ME1 LINE L1 5975 6334 0 222 379 39 0 chr2 27240827 27240930 -226015653 + L2 LINE L2 3157 3263 -9 203 306 91 25 chr2 27242056 27242177 -226014406 - MIR3 SINE MIR -28 180 52 260 250 66 13 chr2 27242422 27242498 -226014085 - MIR3 SINE MIR -20 188 109 269 296 97 0 chr2 27242783 27242910 -226013673 - MIR3 SINE MIR -85 123 13 238 49 49 24 chr2 27243823 27243864 -226012719 - HSMAR1 DNA Mariner 0 1287 1246 219 204 74 0 chr2 27244130 27244184 -226012399 - MIR SINE MIR -57 151 94 223 151 94 0 chr2 27294721 27294774 -225961809 - MIR SINE MIR -112 150 93 2111 114 3 17 chr2 27295048 27295345 -225961238 + AluSx SINE Alu 2 294 -18 659 136 0 10 chr2 27295345 27295448 -225961135 - AluJo/FLAM SINE Alu -194 118 17 203 333 0 13 chr2 27295646 27295721 -225960862 - MIR SINE MIR -86 122 49 487 308 36 41 chr2 27296052 27296086 -225960497 - L1MC4a LINE L1 -1880 5928 5895 1884 174 0 19 chr2 27296086 27296396 -225960187 - AluJo SINE Alu -8 304 1 487 308 36 41 chr2 27296396 27296582 -225960001 - L1MC4a LINE L1 -1913 5895 5709 419 270 85 21 chr2 27296758 27296947 -225959636 - L1MC4a LINE L1 -2184 5624 5424 1182 195 27 14 chr2 27296956 27297177 -225959406 - AluJb SINE Alu -88 224 1 894 203 39 0 chr2 27297182 27297364 -225959219 - AluJo SINE Alu -1 311 123 275 320 46 13 chr2 27297364 27297489 -225959094 - L1MC4a LINE L1 -2395 5413 5281 1976 132 2 103 chr2 27297489 27297852 -225958731 - L1MB8 LINE L1 0 6178 5865 1639 167 29 4 chr2 27297852 27298159 -225958424 + AluSx SINE Alu 1 314 0 1976 132 2 103 chr2 27298159 27298240 -225958343 - L1MB8 LINE L1 -313 5865 5777 275 320 46 13 chr2 27298240 27298267 -225958316 - L1MC4a LINE L1 -2527 5281 5256 305 289 40 62 chr2 27298414 27298524 -225958059 - L1MC4a LINE L1 -1089 5057 4946 2251 95 3 30 chr2 27298524 27298828 -225957755 - AluSx SINE Alu -16 296 1 305 289 40 62 chr2 27298828 27299005 -225957578 - L1MC4a LINE L1 -1200 4946 4769 250 223 77 179 chr2 27299039 27299121 -225957462 - L1MC5 LINE L1 -48 7913 7824 2286 120 3 0 chr2 27299121 27299430 -225957153 + AluSx SINE Alu 1 310 -2 250 223 77 179 chr2 27299430 27299501 -225957082 - L1MC5 LINE L1 -137 7824 7747 6731 113 6 44 chr2 27299501 27300508 -225956075 + LTR5 LTR ERVK 1 969 0 250 223 77 179 chr2 27300508 27300529 -225956054 - L1MC5 LINE L1 -214 7747 7725 1682 163 3 55 chr2 27300529 27300855 -225955728 - AluJb SINE Alu -3 309 1 250 223 77 179 chr2 27300855 27300952 -225955631 - L1MC5 LINE L1 -236 7725 7668 1996 186 116 13 chr2 27300954 27301412 -225955171 + MLT1D LTR MaLR 1 505 0 2031 115 42 7 chr2 27301482 27301768 -225954815 - AluJb SINE Alu -16 296 1 294 231 77 0 chr2 27301917 27302008 -225954575 + MIR3 SINE MIR 62 159 -49 752 169 0 0 chr2 27302136 27302254 -225954329 + FLAM_C SINE Alu 1 118 -15 26 50 0 0 chr2 27302254 27302294 -225954289 + AT_rich Low_complexity Low_complexity 1 40 0 611 207 45 34 chr2 27302520 27302603 -225953980 + MER53 DNA DNA 2 83 -106 2969 113 20 73 chr2 27302603 27302754 -225953829 - LTR26B LTR ERV1 -1 530 372 1767 155 33 7 chr2 27302754 27303057 -225953526 - AluJo SINE Alu -1 311 1 2969 113 20 73 chr2 27303057 27303277 -225953306 - LTR26B LTR ERV1 -159 372 196 1740 156 33 7 chr2 27303277 27303552 -225953031 - AluJb SINE Alu -10 302 21 2969 113 20 73 chr2 27303552 27303739 -225952844 - LTR26B LTR ERV1 -335 196 1 611 207 45 34 chr2 27303739 27303834 -225952749 + MER53 DNA DNA 83 182 -7 2151 140 0 0 chr2 27303906 27304199 -225952384 + AluSx SINE Alu 1 293 -19 1995 136 32 23 chr2 27304284 27304593 -225951990 + AluSx SINE Alu 1 312 0 254 278 59 19 chr2 27305430 27305537 -225951046 - MIR SINE MIR -65 143 51 2411 75 20 0 chr2 27305802 27306094 -225950489 + AluSx SINE Alu 3 300 -12 2885 111 89 81 chr2 27306452 27306682 -225949901 + LTR24C LTR ERV1 1 228 -407 2327 95 3 3 chr2 27306682 27306976 -225949607 - AluSx SINE Alu -18 294 1 2885 111 89 81 chr2 27306976 27307375 -225949208 + LTR24C LTR ERV1 228 635 0 2652 166 73 8 chr2 27307420 27307939 -225948644 - MER41A LTR ERV1 0 554 2 192 264 92 0 chr2 27308136 27308223 -225948360 + L2 LINE L2 2939 3033 -239 196 316 94 8 chr2 27308439 27308556 -225948027 + L2 LINE L2 3182 3308 -5 1488 123 0 0 chr2 27308973 27309168 -225947415 + AluSx SINE Alu 1 195 -117 282 73 0 0 chr2 27309168 27309209 -225947374 + AluSx SINE Alu 254 294 -8 227 300 57 57 chr2 27309304 27309444 -225947139 + L2 LINE L2 2910 3049 -223 1591 177 30 7 chr2 27309609 27309880 -225946703 - AluJo SINE Alu -29 283 7 2115 135 0 7 chr2 27309920 27310216 -225946367 + AluSx SINE Alu 3 296 -16 2253 148 45 5 chr2 27310223 27310642 -225945941 - LTR56 LTR ERV1 -2 443 8 3987 117 29 0 chr2 27310707 27311324 -225945259 + MER41B LTR ERV1 1 635 0 2323 102 6 6 chr2 27311405 27311718 -225944865 - AluSp SINE Alu 0 313 1 1783 193 3 3 chr2 27311718 27312018 -225944565 - AluJb SINE Alu -12 300 1 2061 80 9 49 chr2 27312048 27312327 -225944256 + MER4E LTR ERV1 1 267 -512 2177 83 31 14 chr2 27312327 27312617 -225943966 + AluSg SINE Alu 1 295 -15 2061 80 9 49 chr2 27312617 27312663 -225943920 + MER4E LTR ERV1 267 313 -466 1510 70 74 0 chr2 27312674 27312889 -225943694 + MER4E LTR ERV1 536 766 0 261 339 33 25 chr2 27312996 27313117 -225943466 + MIR SINE MIR 22 143 -65 2390 84 0 13 chr2 27313420 27313731 -225942852 + AluSx SINE Alu 1 307 -5 220 243 129 0 chr2 27314865 27314935 -225941648 - L2 LINE L2 -842 2472 2394 297 54 0 0 chr2 27315124 27315161 -225941422 - AluSp/q SINE Alu -35 268 232 2328 116 0 0 chr2 27315952 27316255 -225940328 + AluSx SINE Alu 1 303 -9 689 289 44 18 chr2 27316337 27316562 -225940021 - MIR SINE MIR -20 242 12 319 302 134 13 chr2 27316606 27316755 -225939828 - MIR3 SINE MIR -21 187 21 706 137 32 8 chr2 27317365 27317489 -225939094 + FLAM_C SINE Alu 1 127 -16 21 0 0 0 chr2 27317489 27317510 -225939073 + AT_rich Low_complexity Low_complexity 1 21 0 312 221 117 0 chr2 27317888 27317965 -225938618 + MIR3 SINE MIR 93 178 -30 2232 88 27 10 chr2 27317996 27318293 -225938290 - AluY SINE Alu -9 302 1 1836 150 49 0 chr2 27318293 27318579 -225938004 - AluJo SINE Alu -12 300 1 1921 170 0 7 chr2 27319759 27320065 -225936518 + AluJb SINE Alu 1 304 -8 2192 145 0 0 chr2 27320072 27320382 -225936201 + AluSx SINE Alu 1 310 -2 27 0 0 0 chr2 27320953 27320980 -225935603 + AT_rich Low_complexity Low_complexity 1 27 0 833 146 0 0 chr2 27321326 27321456 -225935127 + FLAM_A SINE Alu 4 133 0 303 293 57 9 chr2 27322297 27322403 -225934180 + L3 LINE CR1 1182 1292 -285 310 381 19 12 chr2 27322477 27322637 -225933946 + MER117 DNA MER1_type 33 193 -4 1184 221 19 47 chr2 27322745 27322855 -225933728 - Charlie4a DNA MER1_type -1453 508 396 2409 70 7 10 chr2 27322855 27323156 -225933427 + AluY SINE Alu 1 300 -11 1184 221 19 47 chr2 27323156 27323250 -225933333 - Charlie4a DNA MER1_type -1565 396 301 2252 117 3 0 chr2 27323250 27323548 -225933035 - AluSx SINE Alu -13 299 1 1184 221 19 47 chr2 27323548 27323704 -225932879 - Charlie4a DNA MER1_type -1660 301 157 479 296 0 22 chr2 27324309 27324444 -225932139 + MIR3 SINE MIR 30 161 -47 212 244 0 0 chr2 27324624 27324669 -225931914 + MIR3 SINE MIR 157 201 -7 2076 133 7 3 chr2 27326554 27326847 -225929736 + AluSx SINE Alu 1 294 -18 369 227 153 23 chr2 27327276 27327380 -225929203 - MER112 DNA MER1_type -45 215 126 180 0 0 0 chr2 27327380 27327400 -225929183 + (TG)n Simple_repeat Simple_repeat 2 21 0 369 227 153 23 chr2 27327400 27327471 -225929112 - MER112 DNA MER1_type -134 126 17 2238 86 41 10 chr2 27328574 27328865 -225927718 - AluSx SINE Alu -12 300 1 278 369 56 6 chr2 27328914 27329074 -225927509 + MIR3 SINE MIR 39 206 -2 2058 121 44 7 chr2 27329154 27329452 -225927131 - AluSc SINE Alu 0 309 1 1800 138 73 10 chr2 27329452 27329741 -225926842 - AluJo SINE Alu -3 309 3 207 205 0 0 chr2 27329864 27329903 -225926680 - MIR SINE MIR -58 150 112 209 178 0 22 chr2 27330175 27330220 -225926363 - MIR SINE MIR -71 137 94 2614 93 43 24 chr2 27330785 27331205 -225925378 - MSTA LTR MaLR 0 428 1 361 237 200 0 chr2 27331313 27331448 -225925135 - MIR3 SINE MIR -45 163 2 2319 97 7 13 chr2 27331465 27331773 -225924810 + AluSx SINE Alu 1 306 -6 2711 43 0 0 chr2 27331781 27332083 -225924500 + AluY SINE Alu 3 304 -7 584 134 85 12 chr2 27332083 27332229 -225924354 + Tigger3(Golem) DNA MER2_type 2409 2569 -459 1795 186 0 3 chr2 27332229 27332524 -225924059 - AluJo SINE Alu -18 294 1 584 134 85 12 chr2 27332524 27332535 -225924048 + Tigger3(Golem) DNA MER2_type 2569 2578 -450 * 1672 115 35 0 chr2 27332525 27332786 -225923797 + Tigger3(Golem) DNA MER2_type 2747 3016 -13 1275 99 0 5 chr2 27332898 27333100 -225923483 + AluSc SINE Alu 1 299 -10 817 215 0 7 chr2 27333103 27333247 -225923336 + AluJo/FRAM SINE Alu 137 279 -33 189 0 0 0 chr2 27333262 27333283 -225923300 + (TA)n Simple_repeat Simple_repeat 2 22 0 1343 128 84 0 chr2 27333288 27333527 -225923056 - L1MB3 LINE L1 -19 6164 5902 2275 113 0 7 chr2 27333527 27333836 -225922747 - AluY SINE Alu -4 307 1 1098 162 5 44 chr2 27333846 27334050 -225922533 - AluJb SINE Alu -13 299 104 2248 111 10 3 chr2 27334079 27334385 -225922198 - AluSx SINE Alu -3 309 2 649 165 18 0 chr2 27334386 27334495 -225922088 - AluSq/x SINE Alu -197 115 5 2208 148 15 18 chr2 27334500 27334891 -225921692 - L1MB3 LINE L1 -274 5909 5520 233 148 222 37 chr2 27334913 27334994 -225921589 - L1ME4a LINE L1 -2 6119 6024 289 240 39 58 chr2 27336247 27336351 -225920232 - MIR SINE MIR -111 151 50 892 109 0 0 chr2 27336717 27336836 -225919747 - AluJ SINE Alu -188 124 6 2510 55 0 10 chr2 27336843 27337150 -225919433 - AluY SINE Alu -7 304 1 1204 168 56 5 chr2 27337153 27337367 -225919216 - AluJb SINE Alu -3 309 85 380 293 61 14 chr2 27337432 27337579 -225919004 - L1M4 LINE L1 -1836 4310 4157 189 327 0 0 chr2 27337734 27337786 -225918797 + L2 LINE L2 1234 1285 -2029 952 189 5 32 chr2 27337787 27337977 -225918606 - AluJ SINE Alu -16 296 112 279 235 20 39 chr2 27338042 27338144 -225918439 + L2 LINE L2 1290 1389 -1925 2341 103 3 0 chr2 27338298 27338610 -225917973 - AluSp SINE Alu 0 313 1 1957 297 121 37 chr2 27338610 27339645 -225916938 + L2 LINE L2 1681 2805 -509 376 267 38 45 chr2 27339646 27339912 -225916671 - HAL1 LINE L1 -1420 1087 824 2288 106 3 28 chr2 27339940 27340261 -225916322 - AluSq SINE Alu 0 313 1 299 311 76 0 chr2 27340469 27340601 -225915982 + LTR33A LTR ERVL 380 521 -2 370 265 56 38 chr2 27340710 27340997 -225915586 - L1M4 LINE L1 -2980 3166 2875 346 225 171 9 chr2 27341188 27341299 -225915284 + MIR3 SINE MIR 59 187 -21 214 192 26 154 chr2 27341388 27341466 -225915117 - L2 LINE L2 -185 3087 3020 315 186 80 97 chr2 27341488 27341569 -225915014 - L2 LINE L2 0 3313 3233 354 79 270 0 chr2 27341569 27341632 -225914951 + MADE1 DNA Mariner 1 80 0 315 186 80 97 chr2 27341632 27341663 -225914920 - L2 LINE L2 -80 3233 3203 274 213 153 12 chr2 27343190 27343291 -225913292 - FLAM_C SINE Alu -9 124 22 6504 33 12 17 chr2 27344323 27345074 -225911509 - SVA Other Other 0 1386 640 2069 118 24 0 chr2 27345337 27345625 -225910958 - AluSx SINE Alu -17 295 1 29 0 0 0 chr2 27345641 27345670 -225910913 + AT_rich Low_complexity Low_complexity 1 29 0 784 204 0 15 chr2 27345670 27345807 -225910776 - AluJo SINE Alu -176 136 2 1021 147 0 40 chr2 27345811 27345988 -225910595 - AluJo SINE Alu -21 291 122 324 196 38 38 chr2 27345989 27346122 -225910461 - HAL1 LINE L1 -1352 1155 1023 496 86 0 0 chr2 27346436 27346506 -225910077 - Alu SINE Alu -11 299 230 503 254 127 25 chr2 27346690 27346887 -225909696 - MLT1K LTR MaLR -6 582 366 1509 193 56 29 chr2 27346888 27347369 -225909214 + MLT1D LTR MaLR 49 505 0 1289 119 86 8 chr2 27347460 27347703 -225908880 + MER21A LTR ERV1 1 262 -669 2408 125 77 93 chr2 27347711 27347906 -225908677 + MER21A LTR ERV1 377 574 -357 2517 71 13 7 chr2 27347906 27348216 -225908367 - AluSx SINE Alu 0 312 1 2408 125 77 93 chr2 27348216 27348578 -225908005 + MER21A LTR ERV1 574 925 -6 417 38 0 0 chr2 27348651 27348704 -225907879 + MADE1 DNA Mariner 27 79 -1 670 208 208 63 chr2 27348797 27348965 -225907618 - L1ME3A LINE L1 0 6170 6028 2216 85 0 72 chr2 27348965 27349284 -225907299 - AluSq SINE Alu -17 296 1 670 208 208 63 chr2 27349284 27349466 -225907117 - L1ME3A LINE L1 -142 6028 5769 398 123 15 0 chr2 27349477 27349542 -225907041 - MER41B LTR ERV1 -89 546 481 1809 154 0 39 chr2 27349664 27349838 -225906745 - AluJb SINE Alu -12 300 142 2476 96 0 0 chr2 27349838 27350139 -225906444 - AluSc SINE Alu -8 301 1 1809 154 0 39 chr2 27350139 27350276 -225906307 - AluJb SINE Alu -170 142 1 219 125 0 0 chr2 27350348 27350388 -225906195 + (TA)n Simple_repeat Simple_repeat 2 41 0 592 139 20 50 chr2 27350406 27350507 -225906076 + AluJo/FLAM SINE Alu 20 117 -195 837 109 0 0 chr2 27350509 27350645 -225905938 - AluSg/x SINE Alu 0 310 175 23 33 0 0 chr2 27350656 27350686 -225905897 + AT_rich Low_complexity Low_complexity 1 30 0 2407 87 3 0 chr2 27351868 27352166 -225904417 - AluSx SINE Alu -11 301 3 562 149 18 26 chr2 27352180 27352294 -225904289 - MER65A LTR ERV1 -268 177 65 2402 87 7 0 chr2 27352298 27352597 -225903986 - AluSx SINE Alu -7 305 5 2457 86 3 0 chr2 27352682 27352984 -225903599 - AluSp SINE Alu -10 303 1 2348 89 0 35 chr2 27353013 27353327 -225903256 + AluSx SINE Alu 2 304 -8 319 282 27 27 chr2 27353450 27353560 -225903023 + L1MC4 LINE L1 6609 6718 -1324 1993 156 7 0 chr2 27353609 27353911 -225902672 - AluJb SINE Alu -8 304 1 2467 113 47 43 chr2 27353977 27354369 -225902214 - MER65A LTR ERV1 0 445 49 2290 100 13 0 chr2 27354369 27354668 -225901915 - AluSq SINE Alu -10 303 1 2467 113 47 43 chr2 27354668 27354718 -225901865 - MER65A LTR ERV1 -396 49 1 1304 177 52 20 chr2 27354759 27355007 -225901576 - AluJo SINE Alu -36 276 21 2778 72 8 44 chr2 27355176 27355565 -225901018 - THE1C LTR MaLR 0 375 1 750 186 0 0 chr2 27356595 27356713 -225899870 - FLAM_C SINE Alu -15 118 1 31 0 0 0 chr2 27356720 27356751 -225899832 + AT_rich Low_complexity Low_complexity 1 31 0 202 224 0 0 chr2 27356766 27356815 -225899768 + A-rich Low_complexity Low_complexity 1 49 0 333 196 0 0 chr2 27356815 27356871 -225899712 - Alu SINE Alu -13 289 234 1641 191 29 0 chr2 27356930 27357233 -225899350 + AluJb SINE Alu 1 311 0 272 108 0 0 chr2 27357233 27357270 -225899313 - FLAM_A SINE Alu -13 120 84 2080 130 0 46 chr2 27358151 27358475 -225898108 - AluSx SINE Alu -3 309 1 820 142 8 8 chr2 27358491 27358618 -225897965 - FLAM_C SINE Alu -16 127 1 1533 178 7 43 chr2 27358665 27358969 -225897614 - AluJb SINE Alu -19 293 1 1192 225 131 54 chr2 27359110 27359196 -225897387 + MER34B LTR ERV1 1 79 -506 2328 100 0 13 chr2 27359196 27359482 -225897101 + AluSx SINE Alu 1 284 -28 225 0 0 0 chr2 27359482 27359507 -225897076 + (TTAAA)n Simple_repeat Simple_repeat 3 27 0 2328 100 0 13 chr2 27359507 27359519 -225897064 + AluSx SINE Alu 284 295 -17 1192 225 131 54 chr2 27359519 27359956 -225896627 + MER34B LTR ERV1 79 585 0 1077 162 0 0 chr2 27360515 27360682 -225895901 - AluJb SINE Alu -6 306 140 450 280 120 13 chr2 27360765 27360990 -225895593 + MIR SINE MIR 11 259 -3 250 289 97 18 chr2 27362340 27362454 -225894129 - MIR SINE MIR -80 182 60 2069 118 0 0 chr2 27362754 27363034 -225893549 - AluSx SINE Alu -7 305 26 1920 78 0 0 chr2 27363678 27363923 -225892660 + AluY SINE Alu 1 245 -66 4155 136 68 30 chr2 27363923 27365184 -225891399 + pTR5 LTR ERV1 743 2399 -39 537 46 0 130 chr2 27365184 27365292 -225891291 + AluYa5/8 SINE Alu 218 311 0 36 23 0 0 chr2 27365392 27365435 -225891148 + GC_rich Low_complexity Low_complexity 1 43 0 2112 98 0 0 chr2 27365708 27365983 -225890600 - AluSx SINE Alu -5 307 33 1077 120 44 0 chr2 27366011 27366169 -225890414 - AluJo SINE Alu -1 301 137 2140 98 0 21 chr2 27367089 27367374 -225889209 - AluSc SINE Alu -30 279 1 357 285 81 12 chr2 27367713 27367885 -225888698 + L1ME LINE L1 5567 5750 -371 410 263 165 46 chr2 27367891 27368286 -225888297 - LTR67 LTR ERVL -6 551 110 2232 91 3 3 chr2 27368985 27369271 -225887312 + AluSg SINE Alu 1 286 -24 804 207 78 5 chr2 27369320 27369537 -225887046 - LTR37A LTR ERV1 -13 413 181 829 144 24 0 chr2 27369711 27369836 -225886747 - AluJo SINE Alu -181 131 4 1817 168 83 13 chr2 27369836 27370234 -225886349 - MLT1C LTR MaLR -39 428 3 2327 92 3 22 chr2 27370246 27370560 -225886023 + AluSc SINE Alu 1 308 -1 2134 159 38 0 chr2 27370564 27370935 -225885648 - MER57A LTR ERV1 -18 385 1 287 190 76 13 chr2 27371059 27371138 -225885445 - MER31-int LTR ERV1 -749 4187 4104 1765 179 0 0 chr2 27371245 27371518 -225885065 - AluJb SINE Alu -37 275 3 346 314 32 54 chr2 27371590 27371775 -225884808 - MER31-int LTR ERV1 -918 4018 3838 2136 126 0 3 chr2 27371848 27372149 -225884434 + AluSx SINE Alu 1 300 -12 912 211 6 0 chr2 27372437 27372612 -225883971 - FRAM SINE Alu -4 172 1 2261 84 11 0 chr2 27372847 27373133 -225883450 + AluY SINE Alu 1 289 -22 1012 196 0 0 chr2 27373144 27373307 -225883276 + AluJb SINE Alu 137 299 -13 2287 113 0 7 chr2 27373312 27373613 -225882970 + AluSx SINE Alu 1 299 -13 1938 146 0 29 chr2 27373615 27373930 -225882653 + AluJo SINE Alu 5 310 -2 27 0 0 0 chr2 27373953 27373980 -225882603 + AT_rich Low_complexity Low_complexity 1 27 0 319 270 7 40 chr2 27374003 27374151 -225882432 - MER31-int LTR ERV1 -2171 2765 2623 2046 135 3 7 chr2 27374314 27374611 -225881972 + AluSx SINE Alu 1 296 -16 1346 189 128 38 chr2 27374846 27375212 -225881371 + Charlie1b DNA MER1_type 6 404 -119 900 137 0 0 chr2 27375247 27375371 -225881212 - FLAM_C SINE Alu -19 124 1 361 163 109 11 chr2 27375382 27375474 -225881109 + Charlie1b DNA MER1_type 423 523 0 2205 117 0 13 chr2 27375496 27375803 -225880780 - AluSg SINE Alu -7 303 1 22 0 0 0 chr2 27376198 27376220 -225880363 + AT_rich Low_complexity Low_complexity 1 22 0 1254 84 0 13 chr2 27376230 27376384 -225880199 - AluSx SINE Alu -155 157 6 547 232 0 0 chr2 27376436 27376548 -225880035 + FRAM SINE Alu 65 176 0 1174 73 0 0 chr2 27377168 27377305 -225879278 - AluSq/x SINE Alu -175 137 1 2263 112 0 10 chr2 27378207 27378503 -225878080 + AluSx SINE Alu 1 293 -19 223 308 132 0 chr2 27378540 27378631 -225877952 + MIR SINE MIR 28 130 -132 753 135 0 0 chr2 27379267 27379378 -225877205 - AluSx SINE Alu -10 302 192 1063 104 0 0 chr2 27379378 27379512 -225877071 - AluSx SINE Alu -173 140 7 386 215 23 73 chr2 27379730 27379907 -225876676 + MER69 DNA AcHobo 2046 2213 -313 251 299 110 7 chr2 27379928 27380082 -225876501 + MLT1L LTR MaLR 369 538 -77 2145 120 7 0 chr2 27380088 27380388 -225876195 + AluSx SINE Alu 4 305 -7 797 246 49 23 chr2 27380548 27380812 -225875771 - L1MCb LINE L1 -5686 359 89 2148 133 3 0 chr2 27380815 27381116 -225875467 - AluSq SINE Alu -11 302 1 202 306 32 51 chr2 27381149 27381306 -225875277 - L2 LINE L2 -286 2986 2833 248 244 0 0 chr2 27381432 27381477 -225875106 - L2 LINE L2 -17 3255 3211 198 0 0 0 chr2 27381488 27381510 -225875073 + (TTTTA)n Simple_repeat Simple_repeat 4 25 0 1960 86 0 4 chr2 27381857 27382101 -225874482 - AluSx SINE Alu -56 256 14 8672 191 38 39 chr2 27382142 27382721 -225873862 + L1MC2 LINE L1 2860 3438 -2906 753 178 0 0 chr2 27382721 27382839 -225873744 + FLAM_C SINE Alu 1 118 -15 8672 191 38 39 chr2 27382839 27382896 -225873687 + L1MC2 LINE L1 3438 3494 -2850 1861 176 3 7 chr2 27382896 27383198 -225873385 + AluJb SINE Alu 3 303 -9 8672 191 38 39 chr2 27383198 27383762 -225872821 + L1MC2 LINE L1 3494 4057 -2287 2369 94 0 7 chr2 27383762 27384071 -225872512 + AluSq SINE Alu 1 307 -6 8672 191 38 39 chr2 27384071 27384589 -225871994 + L1MC2 LINE L1 4057 4574 -1770 2195 108 7 0 chr2 27384589 27384886 -225871697 - AluSx SINE Alu -13 299 1 8672 191 38 39 chr2 27384886 27386490 -225870093 + L1MC2 LINE L1 4574 6184 -160 1604 161 0 30 chr2 27386490 27386788 -225869795 + AluJo SINE Alu 1 289 -23 8672 191 38 39 chr2 27386788 27386948 -225869635 + L1MC2 LINE L1 6184 6343 -1 213 283 45 101 chr2 27387089 27387287 -225869296 + L2 LINE L2 3126 3312 -1 2413 116 53 39 chr2 27387789 27388221 -225868362 + MER65A LTR ERV1 1 438 -7 1952 141 0 7 chr2 27388722 27389027 -225867556 - AluSx SINE Alu -9 303 1 228 182 0 0 chr2 27389279 27389323 -225867260 + CT-rich Low_complexity Low_complexity 1 44 0 1175 174 9 22 chr2 27389323 27389553 -225867030 - AluJo SINE Alu 0 312 86 186 233 14 96 chr2 27390270 27390296 -225866287 - MIR SINE MIR -42 220 193 2290 81 10 0 chr2 27390296 27390591 -225865992 - AluSq SINE Alu -14 299 2 186 233 14 96 chr2 27390591 27390637 -225865946 - MIR SINE MIR -69 193 154 380 322 67 34 chr2 27390698 27390937 -225865646 - MIR SINE MIR -1 261 15 577 297 94 5 chr2 27391354 27391556 -225865027 + MIR SINE MIR 3 222 -40 2195 122 0 0 chr2 27391564 27391876 -225864707 - AluSx SINE Alu 0 312 1 540 200 105 0 chr2 27391934 27392039 -225864544 + FLAM_C SINE Alu 1 116 -17 619 115 0 0 chr2 27392065 27392152 -225864431 + AluJ/FRAM SINE Alu 218 304 -8 1876 129 48 0 chr2 27392225 27392520 -225864063 - AluSx SINE Alu -3 309 1 21 0 0 0 chr2 27392547 27392568 -225864015 + AT_rich Low_complexity Low_complexity 1 21 0 183 226 0 57 chr2 27392810 27392863 -225863720 + MIR3 SINE MIR 118 167 -41 983 136 0 7 chr2 27393463 27393646 -225862937 - AluSg/x SINE Alu 0 308 127 2243 89 0 9 chr2 27393654 27393969 -225862614 - AluSx SINE Alu 0 312 1 2141 92 30 0 chr2 27393971 27394266 -225862317 - AluSp SINE Alu -9 304 1 1537 203 3 7 chr2 27394268 27394563 -225862020 - AluJb SINE Alu -18 294 1 495 259 87 40 chr2 27394861 27395100 -225861483 + MIR SINE MIR 1 243 -19 226 137 0 98 chr2 27395646 27395697 -225860886 + Tigger5 DNA MER2_type 1266 1311 -1012 387 343 50 11 chr2 27395697 27395878 -225860705 - MIR SINE MIR -55 207 20 22 0 0 0 chr2 27397581 27397603 -225858980 + GC_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 27399664 27399685 -225856898 + GC_rich Low_complexity Low_complexity 1 21 0 368 271 0 66 chr2 27400709 27400831 -225855752 - L1MC4 LINE L1 -1336 6706 6593 2111 94 3 17 chr2 27401427 27401724 -225854859 + AluSx SINE Alu 1 293 -19 428 234 66 36 chr2 27402449 27402485 -225854098 + MIR SINE MIR 121 154 -108 562 113 0 0 chr2 27402485 27402565 -225854018 + MADE1 DNA Mariner 1 80 0 428 234 66 36 chr2 27402565 27402665 -225853918 + MIR SINE MIR 154 261 -1 357 246 184 18 chr2 27403198 27403312 -225853271 - MIR SINE MIR -93 169 37 1178 202 30 11 chr2 27403342 27403604 -225852979 - MLT2C1 LTR ERVL -11 386 120 1176 179 9 5 chr2 27403607 27403825 -225852758 + AluJb SINE Alu 85 303 -9 717 144 17 0 chr2 27403825 27403943 -225852640 - MLT2C1 LTR ERVL -272 125 6 1932 150 6 13 chr2 27403943 27404257 -225852326 + AluSx SINE Alu 1 312 0 2281 97 3 0 chr2 27404573 27404884 -225851699 - AluSx SINE Alu 0 312 1 2122 97 0 3 chr2 27404915 27405205 -225851378 + AluSg SINE Alu 2 290 -20 418 196 147 0 chr2 27405856 27405958 -225850625 - L1ME3A LINE L1 -12 6158 6042 239 188 62 0 chr2 27405958 27406006 -225850577 + MER57A LTR ERV1 295 345 -58 1226 246 131 12 chr2 27406033 27406460 -225850123 - L1ME3A LINE L1 -114 6056 5579 298 61 76 0 chr2 27406652 27406718 -225849865 + (TA)n Simple_repeat Simple_repeat 2 72 0 273 463 0 0 chr2 27406850 27406958 -225849625 + polypyrimidine Low_complexity Low_complexity 1 108 0 25 0 0 0 chr2 27407166 27407191 -225849392 + AT_rich Low_complexity Low_complexity 1 25 0 2077 111 0 10 chr2 27407490 27407796 -225848787 + AluSx SINE Alu 1 303 -9 2467 53 0 0 chr2 27408406 27408706 -225847877 - AluY SINE Alu -11 300 1 1562 157 23 33 chr2 27408809 27409109 -225847474 - AluJo SINE Alu -15 297 1 386 305 88 24 chr2 27409359 27409556 -225847027 - L1MB5 LINE L1 -319 5855 5638 352 253 96 34 chr2 27410224 27410370 -225846213 + MIR SINE MIR 50 204 -58 1066 261 82 61 chr2 27410702 27411142 -225845441 + L1MC4a LINE L1 5572 6020 -101 215 242 177 0 chr2 27411700 27411762 -225844821 - MIR3 SINE MIR -10 198 126 2025 225 140 22 chr2 27411982 27412488 -225844095 + MLT1E LTR MaLR 28 593 0 414 267 8 15 chr2 27412617 27412748 -225843835 + MER94 DNA DNA 3 132 -2 1442 158 3 67 chr2 27413785 27414082 -225842501 - L1MB8 LINE L1 -14 6164 5887 1705 177 0 7 chr2 27414196 27414495 -225842088 + AluJb SINE Alu 1 297 -15 2130 106 23 3 chr2 27415545 27415848 -225840735 - AluSg SINE Alu -1 309 1 439 270 185 40 chr2 27416322 27416543 -225840040 + MIR SINE MIR 5 256 -6 327 290 94 7 chr2 27416566 27416704 -225839879 - HAL1b LINE L1 0 1348 1199 243 0 0 0 chr2 27416705 27416732 -225839851 + (CA)n Simple_repeat Simple_repeat 2 28 0 1029 85 7 0 chr2 27416782 27416935 -225839648 + L1MA4 LINE L1 6140 6293 -7 2344 84 0 7 chr2 27416959 27417267 -225839316 - AluSx SINE Alu -4 308 3 896 279 104 69 chr2 27417583 27417679 -225838904 - L1MB8 LINE L1 -744 5402 5311 2752 10 0 0 chr2 27417679 27417990 -225838593 - AluYa5 SINE Alu 0 311 1 896 279 104 69 chr2 27417990 27419164 -225837419 - L1MB8 LINE L1 -835 5311 4487 1921 153 0 0 chr2 27419200 27419500 -225837083 - AluJb SINE Alu -12 300 1 740 234 47 0 chr2 27419535 27419727 -225836856 - L1MB7 LINE L1 -13 6171 5971 2298 80 0 0 chr2 27419965 27420264 -225836319 + AluY SINE Alu 1 299 -12 380 290 101 42 chr2 27420265 27420809 -225835774 - L1MB8 LINE L1 -1945 4201 3626 841 113 47 33 chr2 27420813 27420963 -225835620 + FRAM SINE Alu 14 165 -11 703 172 94 0 chr2 27421164 27421292 -225835291 - MER3 DNA MER1_type -18 191 52 540 196 155 27 chr2 27421324 27421472 -225835111 + MER58C DNA MER1_type 49 215 0 293 241 46 19 chr2 27421480 27421588 -225834995 + MER113 DNA MER1_type? 1 111 -410 2028 112 7 0 chr2 27421690 27421976 -225834607 - AluSx SINE Alu -24 288 1 1071 208 162 25 chr2 27422006 27422400 -225834183 + MER113 DNA MER1_type? 74 521 0 2176 83 14 0 chr2 27422645 27422934 -225833649 + AluSg SINE Alu 1 293 -17 500 103 26 0 chr2 27422986 27423064 -225833519 + Alu SINE Alu 223 302 -8 708 184 61 114 chr2 27423413 27423641 -225832942 - L1ME1 LINE L1 -6 6160 5945 1111 156 38 0 chr2 27423646 27423832 -225832751 + MER20 DNA MER1_type 27 219 0 624 227 23 8 chr2 27423846 27423978 -225832605 + MER58 DNA MER1_type 3 136 -205 1289 99 0 16 chr2 27423998 27424180 -225832403 - MLT2B2 LTR ERVL -336 179 1 2421 196 94 79 chr2 27424182 27425317 -225831266 - L1ME1 LINE L1 -711 5467 4395 238 402 6 0 chr2 27426584 27426748 -225829835 - L2 LINE L2 -887 2427 2263 2127 106 7 0 chr2 27426748 27427051 -225829532 - AluSq SINE Alu -8 305 1 2294 66 7 3 chr2 27427197 27427501 -225829082 - AluSq SINE Alu -8 305 1 34 42 0 0 chr2 27427510 27427558 -225829025 + AT_rich Low_complexity Low_complexity 1 48 0 692 278 68 34 chr2 27428038 27428854 -225827729 - L1ME4a LINE L1 -223 5898 5023 230 329 45 78 chr2 27429070 27429313 -225827270 + L2 LINE L2 2953 3187 -85 832 131 0 29 chr2 27429580 27429717 -225826866 + FLAM_C SINE Alu 7 139 -4 1908 110 7 11 chr2 27430124 27430427 -225826156 - AluJb SINE Alu 0 302 1 181 303 232 10 chr2 27431074 27431173 -225825410 - L2 LINE L2 -5 3308 3188 276 246 0 15 chr2 27431187 27431252 -225825331 + MIR SINE MIR 118 181 -81 2445 74 0 0 chr2 27432045 27432356 -225824227 + AluY SINE Alu 1 311 0 1562 144 60 21 chr2 27432485 27432649 -225823934 - AluJo SINE Alu -16 296 115 423 38 0 0 chr2 27432649 27432702 -225823881 + (TG)n Simple_repeat Simple_repeat 2 54 0 1562 144 60 21 chr2 27432702 27432821 -225823762 - AluJo SINE Alu -197 115 2 21 0 0 0 chr2 27432823 27432844 -225823739 + AT_rich Low_complexity Low_complexity 1 21 0 2024 103 13 39 chr2 27432854 27433165 -225823418 + AluSx SINE Alu 1 303 -9 354 157 100 129 chr2 27433570 27433622 -225822961 - L1ME3A LINE L1 -224 5946 5894 2056 127 0 0 chr2 27433622 27433934 -225822649 - AluSx SINE Alu 0 312 1 354 157 100 129 chr2 27433934 27434020 -225822563 - L1ME3A LINE L1 -276 5894 5811 315 0 0 0 chr2 27434756 27434791 -225821792 + (CA)n Simple_repeat Simple_repeat 1 35 0 2191 104 3 3 chr2 27435152 27435460 -225821123 + AluSx SINE Alu 1 308 -4 863 45 22 15 chr2 27438399 27438533 -225818050 + (TTTC)n Simple_repeat Simple_repeat 1 135 0 1764 120 0 29 chr2 27438535 27438811 -225817772 - AluSx SINE Alu -44 268 1 1597 174 91 15 chr2 27439042 27439381 -225817202 - MLT1A1 LTR MaLR 0 365 1 2364 61 0 3 chr2 27439508 27439805 -225816778 - AluY SINE Alu -15 296 1 1623 181 43 51 chr2 27440894 27441287 -225815296 - MLT1B LTR MaLR 0 390 1 815 299 17 9 chr2 27441287 27441518 -225815065 + MIR SINE MIR 30 262 0 2040 134 0 0 chr2 27441916 27442208 -225814375 - AluSx SINE Alu -20 292 1 207 352 77 39 chr2 27442340 27442522 -225814061 + MIR SINE MIR 31 219 -43 705 158 71 24 chr2 27442791 27442918 -225813665 + FLAM_A SINE Alu 1 133 0 342 0 0 0 chr2 27442992 27443030 -225813553 + (GA)n Simple_repeat Simple_repeat 1 38 0 205 259 93 0 chr2 27444023 27444077 -225812506 - L2 LINE L2 -214 3058 3000 242 238 8 25 chr2 27444230 27444352 -225812231 + (TTA)n Simple_repeat Simple_repeat 3 122 0 403 245 51 0 chr2 27444664 27444762 -225811821 + MIR SINE MIR 104 206 -56 676 217 59 0 chr2 27445189 27445341 -225811242 - L1M4 LINE L1 -1143 5003 4843 1331 231 54 9 chr2 27445346 27445679 -225810904 - L1M4 LINE L1 -1368 4778 4431 5854 134 33 19 chr2 27445680 27446005 -225810578 - L1MA8 LINE L1 0 6291 5972 2250 104 0 0 chr2 27446005 27446313 -225810270 - AluSg1 SINE Alu -1 308 1 5854 134 33 19 chr2 27446313 27447160 -225809423 - L1MA8 LINE L1 -319 5972 5108 3444 200 45 8 chr2 27447212 27447992 -225808591 - L1M4 LINE L1 -1794 4352 3544 446 287 0 16 chr2 27447995 27448117 -225808466 + MER5B DNA MER1_type 43 162 -16 253 263 72 66 chr2 27449681 27449833 -225806750 + L2 LINE L2 3103 3255 -17 1921 204 161 21 chr2 27450295 27450476 -225806107 - L1ME3A LINE L1 -8 6162 6008 452 144 10 31 chr2 27450476 27450573 -225806010 - L1MB7 LINE L1 0 6184 6090 1921 204 161 21 chr2 27450573 27450951 -225805632 - L1ME3A LINE L1 -162 6008 5525 3900 106 3 25 chr2 27452856 27453298 -225803285 + MER41A LTR ERV1 1 430 -124 1814 126 0 7 chr2 27453298 27453568 -225803015 - AluSg SINE Alu -5 305 38 3900 106 3 25 chr2 27453568 27453691 -225802892 + MER41A LTR ERV1 430 554 0 180 0 0 0 chr2 27453731 27453751 -225802832 + (CAGCC)n Simple_repeat Simple_repeat 4 23 0 268 159 191 0 chr2 27454782 27454845 -225801738 - MIR3 SINE MIR -25 183 109 1986 128 0 3 chr2 27454857 27455155 -225801428 + AluJb SINE Alu 2 298 -14 312 314 0 0 chr2 27455509 27455595 -225800988 + MIR SINE MIR 170 255 -7 2050 199 91 56 chr2 27456007 27456422 -225800161 - MLT1E3 LTR MaLR 0 624 180 2238 88 0 0 chr2 27456422 27456717 -225799866 - AluSc SINE Alu -14 295 1 2050 199 91 56 chr2 27456717 27456904 -225799679 - MLT1E3 LTR MaLR -444 180 1 1693 171 0 20 chr2 27456997 27457302 -225799281 - AluJo SINE Alu -13 299 1 207 0 0 0 chr2 27457336 27457359 -225799224 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2122 104 3 0 chr2 27457361 27457649 -225798934 - AluSx SINE Alu -23 289 1 408 289 228 14 chr2 27458173 27458384 -225798199 + MIR SINE MIR 2 257 -5 26 0 0 0 chr2 27459683 27459709 -225796874 + AT_rich Low_complexity Low_complexity 1 26 0 1832 129 20 27 chr2 27459725 27460019 -225796564 + AluJo SINE Alu 6 297 -15 1848 220 255 16 chr2 27460114 27460829 -225795754 - L1ME1 LINE L1 -12 6154 5272 866 129 8 0 chr2 27460858 27460990 -225795593 - AluSq/x SINE Alu -179 133 1 2428 184 78 24 chr2 27460991 27461578 -225795005 - L1ME1 LINE L1 -864 5282 4664 249 250 150 0 chr2 27462417 27462497 -225794086 - MIR SINE MIR -110 152 61 275 227 84 130 chr2 27463236 27463310 -225793273 + MIR SINE MIR 110 175 -87 2894 130 26 49 chr2 27463310 27463841 -225792742 - L1MB3 LINE L1 -8 6175 5657 275 227 84 130 chr2 27463841 27463920 -225792663 + MIR SINE MIR 175 256 -6 561 143 0 0 chr2 27464473 27464557 -225792026 + AluJ/FLAM SINE Alu 1 84 -228 753 249 15 51 chr2 27464562 27464835 -225791748 - L1ME1 LINE L1 -1639 4507 4245 25 31 0 0 chr2 27466005 27466037 -225790546 + AT_rich Low_complexity Low_complexity 1 32 0 283 257 145 7 chr2 27466243 27466395 -225790188 + L1ME4a LINE L1 5743 5915 -247 32 57 0 0 chr2 27466397 27466450 -225790133 + AT_rich Low_complexity Low_complexity 1 53 0 337 270 44 36 chr2 27466579 27466716 -225789867 + L1ME4a LINE L1 5963 6100 -21 1874 144 3 0 chr2 27466875 27467167 -225789416 + AluSx SINE Alu 1 293 -19 915 44 35 0 chr2 27467613 27467727 -225788856 + AluSq/x SINE Alu 1 118 -195 493 267 147 16 chr2 27468352 27468543 -225788040 + MER115 DNA AcHobo 1 216 -477 28 29 0 0 chr2 27468656 27468691 -225787892 + AT_rich Low_complexity Low_complexity 1 35 0 684 283 40 0 chr2 27469089 27469287 -225787296 + MER115 DNA AcHobo 488 693 0 1029 168 0 0 chr2 27469921 27470082 -225786501 + FRAM SINE Alu 1 161 -5 336 323 85 8 chr2 27470153 27470283 -225786300 - MIR SINE MIR -71 191 52 1943 125 10 0 chr2 27470404 27470692 -225785891 - AluSq SINE Alu -18 295 5 203 167 48 0 chr2 27471208 27471250 -225785333 + (TTATA)n Simple_repeat Simple_repeat 5 48 0 217 211 88 0 chr2 27472549 27472606 -225783977 - L2 LINE L2 0 3313 3252 818 128 21 21 chr2 27472644 27472785 -225783798 + LTR23 LTR ERV1 259 399 -38 236 257 125 29 chr2 27473424 27473560 -225783023 - L1ME LINE L1 -306 5815 5667 1652 139 4 25 chr2 27475274 27475548 -225781035 + AluJb SINE Alu 1 268 -44 264 167 0 0 chr2 27475565 27475613 -225780970 + (CA)n Simple_repeat Simple_repeat 2 49 0 195 42 0 0 chr2 27475613 27475637 -225780946 + (TG)n Simple_repeat Simple_repeat 2 25 0 1770 83 75 136 chr2 27475855 27476080 -225780503 + MER1B DNA MER1_type 1 197 -2515 2192 112 3 0 chr2 27476080 27476392 -225780191 - AluSq SINE Alu 0 313 1 1770 83 75 136 chr2 27476392 27476527 -225780056 + MER1B DNA MER1_type 197 339 0 960 149 17 23 chr2 27477220 27477395 -225779188 + MER20 DNA MER1_type 4 177 -42 1671 133 6 63 chr2 27477403 27477553 -225779030 + AluJo SINE Alu 1 125 -187 2355 74 0 0 chr2 27477553 27477850 -225778733 + AluY SINE Alu 1 297 -14 1671 133 6 63 chr2 27477850 27478014 -225778569 + AluJo SINE Alu 125 297 -15 288 0 0 0 chr2 27478030 27478062 -225778521 + (TG)n Simple_repeat Simple_repeat 1 32 0 265 336 8 22 chr2 27478313 27478447 -225778136 + CT-rich Low_complexity Low_complexity 5 136 0 2167 109 3 3 chr2 27479244 27479556 -225777027 + AluSx SINE Alu 1 312 0 1289 32 0 37 chr2 27479566 27479753 -225776830 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 182 313 52 52 chr2 27480179 27480294 -225776289 - MIR3 SINE MIR -89 119 5 407 277 29 22 chr2 27481918 27482055 -225774528 + MIR3 SINE MIR 37 174 -34 243 252 29 29 chr2 27482673 27482776 -225773807 + CT-rich Low_complexity Low_complexity 3 105 0 2226 98 0 13 chr2 27482923 27483228 -225773355 + AluSx SINE Alu 1 301 -11 2074 106 20 0 chr2 27484187 27484479 -225772104 + AluSq SINE Alu 1 298 -15 28 29 0 0 chr2 27484759 27484794 -225771789 + AT_rich Low_complexity Low_complexity 1 35 0 28 29 0 0 chr2 27484898 27484933 -225771650 + AT_rich Low_complexity Low_complexity 1 35 0 1134 148 21 145 chr2 27485148 27485260 -225771323 - AluSx SINE Alu -6 296 172 342 0 0 0 chr2 27485260 27485298 -225771285 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 1134 148 21 145 chr2 27485298 27485523 -225771060 - AluSx SINE Alu -130 172 1 1925 138 3 7 chr2 27486657 27486953 -225769630 - AluSx SINE Alu -14 298 4 370 300 36 18 chr2 27487351 27487461 -225769122 - MIR SINE MIR -63 145 34 1253 226 50 83 chr2 27487859 27488022 -225768561 - L1ME4a LINE L1 0 6121 5954 662 180 82 0 chr2 27488022 27488144 -225768439 - FLAM_C SINE Alu 0 133 2 1253 226 50 83 chr2 27488144 27488433 -225768150 - L1ME4a LINE L1 -167 5954 5657 216 0 0 0 chr2 27488433 27488457 -225768126 + (TTA)n Simple_repeat Simple_repeat 2 25 0 2162 101 0 14 chr2 27488459 27488755 -225767828 - AluSc SINE Alu -17 292 1 1253 226 50 83 chr2 27488755 27488879 -225767704 - L1ME4a LINE L1 -465 5656 5560 1046 202 32 32 chr2 27489723 27489971 -225766612 - MLT1B LTR MaLR -142 248 1 902 158 7 26 chr2 27490928 27491080 -225765503 - AluJb SINE Alu -163 149 1 635 239 186 5 chr2 27491152 27491340 -225765243 - MIR SINE MIR -24 238 17 2182 98 17 3 chr2 27491528 27491823 -225764760 + AluSg SINE Alu 1 299 -11 311 306 0 0 chr2 27491908 27491980 -225764603 + (CA)n Simple_repeat Simple_repeat 1 72 0 565 250 14 29 chr2 27494167 27494307 -225762276 + MIR SINE MIR 7 144 -118 348 24 0 0 chr2 27495696 27495737 -225760846 + (CA)n Simple_repeat Simple_repeat 1 41 0 2412 73 7 0 chr2 27496198 27496498 -225760085 + AluY SINE Alu 1 302 -9 389 246 82 18 chr2 27496533 27496643 -225759940 - MIR SINE MIR -44 218 102 180 111 0 0 chr2 27497617 27497644 -225758939 + (TG)n Simple_repeat Simple_repeat 2 28 0 2431 84 3 10 chr2 27498589 27498898 -225757685 + AluSp SINE Alu 1 307 -6 461 107 14 8 chr2 27499391 27499607 -225756976 + AluJo SINE Alu 1 298 -14 676 248 0 0 chr2 27499878 27500011 -225756572 - MER94 DNA DNA 0 134 2 2348 97 3 13 chr2 27500549 27500860 -225755723 - AluSg SINE Alu -2 308 1 1935 164 23 0 chr2 27501068 27501373 -225755210 - AluJb SINE Alu 0 312 1 2716 169 44 4 chr2 27501651 27502177 -225754406 - L1MC3 LINE L1 0 7785 7239 2194 128 0 7 chr2 27502362 27502666 -225753917 + AluSx SINE Alu 1 302 -10 234 156 0 0 chr2 27502801 27502846 -225753737 + (CA)n Simple_repeat Simple_repeat 2 46 0 1397 138 75 48 chr2 27502984 27503045 -225753538 - MER1B DNA MER1_type -2437 275 217 1460 119 50 0 chr2 27503045 27503264 -225753319 - MER30 DNA MER1_type 0 230 1 1397 138 75 48 chr2 27503264 27503470 -225753113 - MER1B DNA MER1_type -2495 217 1 912 291 35 95 chr2 27503644 27504246 -225752337 - L3 LINE CR1 -1 1576 1011 445 238 40 0 chr2 27504243 27504344 -225752239 + MIR SINE MIR 21 125 -137 * 282 263 161 106 chr2 27504342 27504578 -225752005 - L2 LINE L2 -5 3267 3019 * 233 297 126 34 chr2 27504594 27504769 -225751814 - L3 LINE CR1 -657 920 730 2381 89 6 16 chr2 27505275 27505591 -225750992 - AluSp SINE Alu 0 313 1 207 265 31 41 chr2 27506217 27506315 -225750268 + GA-rich Low_complexity Low_complexity 4 100 0 344 242 54 7 chr2 27506730 27506879 -225749704 - L1ME4a LINE L1 -1 6120 5965 1531 131 17 0 chr2 27506911 27507147 -225749436 - MER7A DNA MER2_type 0 337 98 800 214 0 14 chr2 27507150 27507295 -225749288 + FRAM SINE Alu 2 144 -32 259 141 31 0 chr2 27507299 27507363 -225749220 + (TAGA)n Simple_repeat Simple_repeat 4 69 0 347 203 0 0 chr2 27507375 27507439 -225749144 + AluJ/FRAM SINE Alu 217 280 -22 560 219 47 0 chr2 27507491 27507619 -225748964 - MER7A DNA MER2_type -214 132 1 387 303 43 6 chr2 27507665 27507827 -225748756 - MLT1J LTR MaLR -2 509 342 762 263 99 28 chr2 27507982 27508305 -225748278 - L1ME4a LINE L1 -276 5845 5500 185 378 71 0 chr2 27509668 27509766 -225746817 - MIR SINE MIR -4 258 154 274 213 15 8 chr2 27509771 27509862 -225746721 - L1P LINE L1 -740 5411 5322 189 194 65 129 chr2 27509896 27509989 -225746594 - MIR SINE MIR -119 143 57 429 141 165 12 chr2 27510359 27510444 -225746139 - AluJo SINE Alu -128 184 87 376 325 24 8 chr2 27510694 27510817 -225745766 + L1ME LINE L1 5341 5465 -656 271 237 252 14 chr2 27510822 27511144 -225745439 + L1ME LINE L1 5484 5879 -242 396 189 151 82 chr2 27511145 27511304 -225745279 + L2 LINE L2 2358 2527 -787 370 335 6 23 chr2 27511505 27511678 -225744905 - MER110-int LTR ERV1 -3328 3473 3304 2606 61 0 0 chr2 27511688 27511999 -225744584 + AluY SINE Alu 1 311 0 1163 243 23 40 chr2 27512114 27512211 -225744372 - MER34B LTR ERV1 -4 561 464 1926 168 0 10 chr2 27512211 27512521 -225744062 - AluJo SINE Alu -5 307 1 1163 243 23 40 chr2 27512521 27512932 -225743651 - MER34B LTR ERV1 -101 464 4 1620 296 73 32 chr2 27512933 27513785 -225742798 - MER110-int LTR ERV1 -3616 3185 151 823 158 8 15 chr2 27514096 27514229 -225742354 + FLAM_A SINE Alu 1 132 -1 1976 193 87 60 chr2 27514541 27515174 -225741409 + L1MD2 LINE L1 5699 6348 -11 225 221 150 44 chr2 27515375 27515488 -225741095 + L2 LINE L2 2736 2860 -454 210 360 67 54 chr2 27515579 27515818 -225740765 + L2 LINE L2 3004 3245 -27 2312 112 0 3 chr2 27516223 27516528 -225740055 - AluSq SINE Alu -7 306 3 250 345 129 6 chr2 27516714 27516885 -225739698 + L2 LINE L2 1848 2039 -1275 23 33 0 0 chr2 27516950 27516980 -225739603 + AT_rich Low_complexity Low_complexity 1 30 0 1700 108 0 0 chr2 27517351 27517564 -225739019 + AluSx SINE Alu 1 213 -99 2560 60 0 0 chr2 27517666 27517965 -225738618 - AluY SINE Alu -11 300 2 213 283 0 0 chr2 27519031 27519084 -225737499 + MER5B DNA MER1_type 3 55 -123 225 256 0 110 chr2 27519781 27519863 -225736720 + L2 LINE L2 3107 3179 -93 184 348 130 9 chr2 27520049 27520164 -225736419 - L2 LINE L2 -5 3308 3180 1708 103 96 11 chr2 27520176 27520472 -225736111 - AluSx SINE Alu 0 321 4 378 213 28 46 chr2 27521271 27521379 -225735204 - MER5A DNA MER1_type -80 109 4 630 274 238 7 chr2 27521601 27522014 -225734569 - Charlie8 DNA MER1_type -2264 153 27 325 329 125 38 chr2 27522041 27522196 -225734387 - L2 LINE L2 -567 2747 2607 1760 162 36 12 chr2 27522196 27522530 -225734053 - MER2 DNA MER2_type 0 344 3 325 329 125 38 chr2 27522530 27522799 -225733784 - L2 LINE L2 -707 2607 2286 415 309 119 32 chr2 27522820 27523349 -225733234 + L2 LINE L2 2696 3267 -5 2084 159 8 17 chr2 27523707 27524058 -225732525 - MER7A DNA MER2_type 0 346 1 537 273 97 31 chr2 27524221 27524448 -225732135 + MIR SINE MIR 21 262 0 248 148 548 0 chr2 27527378 27527493 -225729090 - MIR3 SINE MIR -23 185 8 281 222 185 30 chr2 27529112 27529247 -225727336 - MIR3 SINE MIR -15 193 38 2165 163 36 71 chr2 27529676 27529776 -225726807 + MLT1D LTR MaLR 1 103 -402 2115 128 10 7 chr2 27529776 27530082 -225726501 + AluJb SINE Alu 1 307 -5 2165 163 36 71 chr2 27530082 27530214 -225726369 + MLT1D LTR MaLR 103 238 -267 1977 163 7 0 chr2 27530214 27530509 -225726074 + AluJb SINE Alu 1 297 -15 2165 163 36 71 chr2 27530509 27530798 -225725785 + MLT1D LTR MaLR 238 505 0 376 319 132 14 chr2 27531050 27531194 -225725389 + L2 LINE L2 3112 3272 0 2127 113 115 36 chr2 27531765 27532156 -225724427 - MSTA LTR MaLR -6 422 1 2211 103 10 10 chr2 27532310 27532620 -225723963 - AluSq SINE Alu -1 312 3 1713 129 75 7 chr2 27533124 27533404 -225723179 + AluJb SINE Alu 1 299 -13 1961 97 0 32 chr2 27533656 27533935 -225722648 + AluSx SINE Alu 1 270 -42 24 0 0 0 chr2 27534179 27534203 -225722380 + GC_rich Low_complexity Low_complexity 1 24 0 2010 99 8 0 chr2 27534691 27534954 -225721629 + AluSg SINE Alu 26 290 -20 2206 106 33 0 chr2 27535357 27535659 -225720924 - AluSx SINE Alu 0 312 1 297 293 41 0 chr2 27535698 27535821 -225720762 + L1M4 LINE L1 2716 2843 -3303 334 294 206 52 chr2 27535987 27536746 -225719837 + HAL1 LINE L1 8 897 -1610 1716 165 19 38 chr2 27536746 27537062 -225719521 + AluJb SINE Alu 1 310 -2 334 294 206 52 chr2 27537062 27537102 -225719481 + HAL1 LINE L1 897 930 -1577 1187 226 95 34 chr2 27537136 27537652 -225718931 + HAL1 LINE L1 1140 1756 -751 2272 106 3 7 chr2 27537652 27537954 -225718629 + AluSx SINE Alu 1 301 -11 1187 226 95 34 chr2 27537954 27538077 -225718506 + HAL1 LINE L1 1756 1870 -637 311 335 131 31 chr2 27538246 27538536 -225718047 - L3 LINE CR1 -1 1576 1258 665 200 8 0 chr2 27538588 27538708 -225717875 - MER5A DNA MER1_type -2 187 67 2065 122 0 0 chr2 27538708 27539003 -225717580 - AluSx SINE Alu -17 295 1 218 304 58 0 chr2 27539866 27539935 -225716648 - MIR SINE MIR -6 256 184 716 141 60 54 chr2 27540639 27540676 -225715907 + MER53 DNA DNA 2 37 -152 2379 39 0 0 chr2 27540676 27540993 -225715590 + AluY SINE Alu 1 317 0 716 141 60 54 chr2 27540993 27541136 -225715447 + MER53 DNA DNA 37 186 -3 504 270 79 7 chr2 27541301 27541453 -225715130 + MIR SINE MIR 3 165 -97 2248 84 0 3 chr2 27541454 27541751 -225714832 + AluSx SINE Alu 1 296 -16 1962 94 10 28 chr2 27541867 27542192 -225714391 + AluSx SINE Alu 1 320 0 25 0 0 0 chr2 27542286 27542311 -225714272 + AT_rich Low_complexity Low_complexity 1 25 0 665 187 32 8 chr2 27542311 27542434 -225714149 - FLAM_C SINE Alu -16 127 2 653 296 129 13 chr2 27542456 27542689 -225713894 - MIR SINE MIR 0 262 3 270 266 43 33 chr2 27543001 27543158 -225713425 - MIR SINE MIR -2 260 44 2301 92 0 0 chr2 27543744 27544047 -225712536 + AluSg SINE Alu 1 303 -7 37 69 0 0 chr2 27544505 27544577 -225712006 + AT_rich Low_complexity Low_complexity 1 72 0 899 183 26 26 chr2 27544632 27544804 -225711779 + AluJo SINE Alu 122 296 -16 1746 130 0 4 chr2 27544804 27545065 -225711518 + AluSx SINE Alu 1 260 -52 899 183 26 26 chr2 27545065 27545083 -225711500 + AluJo SINE Alu 295 312 0 475 312 41 0 chr2 27545168 27545338 -225711245 - L2 LINE L2 -558 2756 2580 1768 157 14 0 chr2 27545379 27545673 -225710910 + AluJb SINE Alu 1 298 -14 1718 139 0 37 chr2 27545695 27545989 -225710594 + AluJo SINE Alu 14 296 -16 1970 117 0 0 chr2 27546044 27546348 -225710235 + AluSx SINE Alu 11 314 0 679 210 6 19 chr2 27546348 27546505 -225710078 + L1ME LINE L1 5228 5382 -764 449 222 77 19 chr2 27546550 27546702 -225709881 + MLT1F1 LTR MaLR 433 595 0 345 158 0 0 chr2 27546702 27546759 -225709824 + L1MC4 LINE L1 7938 7994 -48 385 296 99 60 chr2 27547705 27547938 -225708645 - L2 LINE L2 -1 3271 3030 2196 82 3 7 chr2 27548349 27548652 -225707931 + AluSq SINE Alu 1 302 -11 2684 13 0 3 chr2 27552052 27552360 -225704223 - AluYb8 SINE Alu -11 307 1 348 269 65 9 chr2 27552451 27552559 -225704024 - MIR3 SINE MIR -14 194 81 190 219 0 24 chr2 27552626 27552667 -225703916 - MIR SINE MIR -131 77 38 21 0 0 0 chr2 27552848 27552869 -225703714 + AT_rich Low_complexity Low_complexity 1 21 0 715 294 21 5 chr2 27553143 27553330 -225703253 + MIR SINE MIR 23 212 -50 310 203 90 40 chr2 27555322 27555499 -225701084 + L1ME LINE L1 5584 5769 -352 1649 163 7 7 chr2 27557810 27558098 -225698485 + AluJo SINE Alu 6 293 -19 394 246 125 62 chr2 27558867 27559238 -225697345 - L1ME2 LINE L1 -196 5966 5586 436 271 40 99 chr2 27560460 27560611 -225695972 - MER91A DNA MER1_type -54 142 1 270 252 84 17 chr2 27563064 27563183 -225693400 - L1ME4a LINE L1 -53 6068 5942 306 264 38 28 chr2 27563183 27563289 -225693294 - L1ME4a LINE L1 -3 6118 6012 1191 173 239 30 chr2 27564463 27564832 -225691751 + MLT1D LTR MaLR 60 505 0 * 1283 154 35 27 chr2 27564832 27565157 -225691426 - MLT1D LTR MaLR -112 393 24 2362 87 0 3 chr2 27566130 27566442 -225690141 + AluSq SINE Alu 1 311 -2 287 265 154 19 chr2 27567443 27567605 -225688978 + MER5A DNA MER1_type 5 188 -1 199 218 91 18 chr2 27568569 27568624 -225687959 + MIR SINE MIR 2 60 -202 * 269 230 111 87 chr2 27568590 27568672 -225687911 + MER5A DNA MER1_type 61 148 -41 1577 175 24 0 chr2 27568672 27568963 -225687620 + AluJo SINE Alu 1 298 -14 269 230 111 87 chr2 27568963 27569006 -225687577 + MER5A DNA MER1_type 148 189 0 183 317 12 85 chr2 27569072 27569236 -225687347 + L2 LINE L2 2910 3061 -211 21 36 0 0 chr2 27569492 27569520 -225687063 + AT_rich Low_complexity Low_complexity 1 28 0 253 315 67 27 chr2 27569588 27569737 -225686846 + L2 LINE L2 3109 3263 -9 2169 70 14 3 chr2 27569751 27570038 -225686545 + AluY SINE Alu 1 290 -21 297 78 0 39 chr2 27571005 27571056 -225685527 - AluSp/q SINE Alu -6 297 249 24 0 0 0 chr2 27571354 27571378 -225685205 + AT_rich Low_complexity Low_complexity 1 24 0 2099 104 7 3 chr2 27571914 27572213 -225684370 + AluSq SINE Alu 1 300 -13 1212 150 0 54 chr2 27573642 27573882 -225682701 - AluJo SINE Alu -1 311 85 894 152 7 7 chr2 27573882 27574033 -225682550 - MER58B DNA MER1_type -10 331 181 1475 184 15 31 chr2 27574184 27574510 -225682073 + L1MC4 LINE L1 6794 7114 -928 537 16 0 0 chr2 27574607 27574669 -225681914 + (TG)n Simple_repeat Simple_repeat 2 63 0 1597 161 3 14 chr2 27574942 27575282 -225681301 - AluJo SINE Alu 0 337 1 1726 74 56 63 chr2 27575347 27575662 -225680921 + AluY SINE Alu 1 313 0 233 310 0 0 chr2 27575996 27576054 -225680529 + MIR SINE MIR 183 240 -22 982 184 0 76 chr2 27576093 27576161 -225680422 + MER45A DNA AcHobo 6 78 -1503 2202 104 3 3 chr2 27576161 27576470 -225680113 - AluSx SINE Alu -3 309 1 982 184 0 76 chr2 27576470 27576586 -225679997 + MER45A DNA AcHobo 78 176 -2 941 258 41 12 chr2 27577104 27577348 -225679235 + MIR SINE MIR 2 252 -10 210 283 43 33 chr2 27577968 27578060 -225678523 - L2 LINE L2 -545 2769 2677 298 164 164 0 chr2 27578358 27578419 -225678164 - MIR SINE MIR -74 188 118 191 170 64 85 chr2 27578888 27578935 -225677648 + MER5A DNA MER1_type 31 76 -113 205 344 11 11 chr2 27578958 27579048 -225677535 + MIR SINE MIR 11 100 -162 269 312 233 6 chr2 27579049 27579405 -225677178 - L2 LINE L2 -870 2444 2008 275 227 84 130 chr2 27580636 27580715 -225675868 - MIR SINE MIR -6 256 186 2894 130 26 49 chr2 27580715 27581246 -225675337 + L1MB3 LINE L1 5657 6175 -8 275 227 84 130 chr2 27581246 27581320 -225675263 - MIR SINE MIR -76 186 110 249 250 150 0 chr2 27582059 27582139 -225674444 + MIR SINE MIR 61 152 -110 2422 184 78 25 chr2 27582978 27583566 -225673017 + L1ME1 LINE L1 4664 5282 -864 866 129 8 0 chr2 27583567 27583699 -225672884 + AluSq/x SINE Alu 1 133 -179 709 219 69 19 chr2 27583728 27584443 -225672140 + L1ME1 LINE L1 5272 6154 -12 1832 129 20 27 chr2 27584538 27584832 -225671751 - AluJo SINE Alu -15 297 6 26 0 0 0 chr2 27584848 27584874 -225671709 + AT_rich Low_complexity Low_complexity 1 26 0 408 289 228 14 chr2 27586173 27586384 -225670199 - MIR SINE MIR -5 257 2 2222 113 3 0 chr2 27586908 27587219 -225669364 + AluSx SINE Alu 1 312 0 206 343 49 35 chr2 27587322 27587465 -225669118 + MIR SINE MIR 8 152 -110 198 0 0 0 chr2 27588544 27588566 -225668017 + (TTCA)n Simple_repeat Simple_repeat 1 22 0 236 349 67 0 chr2 27588880 27589029 -225667554 - MIR SINE MIR -69 193 35 681 321 80 0 chr2 27590214 27590438 -225666145 - MIR SINE MIR -9 253 12 2089 86 65 0 chr2 27591488 27591778 -225664805 - AluSx SINE Alu -3 309 1 447 234 0 18 chr2 27593103 27593214 -225663369 - MIR SINE MIR -89 173 65 275 344 38 0 chr2 27596292 27596423 -225660160 - MIR SINE MIR -111 151 16 1371 146 15 131 chr2 27600405 27600741 -225655842 - AluJo SINE Alu -5 297 1 2247 93 0 3 chr2 27601113 27601413 -225655170 - AluSq SINE Alu -14 299 1 5191 149 60 30 chr2 27601415 27601856 -225654727 - L1MC2 LINE L1 -13 6331 5905 2206 115 0 0 chr2 27601856 27602161 -225654422 - AluSx SINE Alu -7 305 1 5191 149 60 30 chr2 27602161 27602716 -225653867 - L1MC2 LINE L1 -439 5905 5294 1378 178 85 24 chr2 27602716 27603009 -225653574 - AluJo SINE Alu -1 311 1 5191 149 60 30 chr2 27603009 27603103 -225653480 - L1MC2 LINE L1 -1050 5294 5204 2263 96 0 0 chr2 27603315 27603616 -225652967 - AluY SINE Alu -10 301 1 1702 132 64 10 chr2 27603693 27603988 -225652595 - AluSx SINE Alu -1 311 1 1801 164 0 7 chr2 27603988 27604292 -225652291 - AluJb SINE Alu -8 304 3 2831 206 24 72 chr2 27604300 27604831 -225651752 - L1 LINE L1 -1773 4373 3903 2207 93 23 0 chr2 27604831 27605131 -225651452 - AluSx SINE Alu -5 307 1 2831 206 24 72 chr2 27605131 27605516 -225651067 - L1 LINE L1 -2243 3903 3501 2163 92 10 0 chr2 27605516 27605819 -225650764 - AluSx SINE Alu -6 306 1 842 110 12 61 chr2 27605819 27605982 -225650601 - AluSg/x SINE Alu -22 290 136 1990 87 30 10 chr2 27605984 27606283 -225650300 - AluSq SINE Alu -8 305 1 182 261 15 31 chr2 27606471 27606536 -225650047 - MIR SINE MIR -111 97 34 555 11 0 178 chr2 27607667 27607757 -225648826 + tRNA-Tyr-TAC tRNA tRNA 1 74 -2 555 55 14 0 chr2 27608100 27608173 -225648410 + tRNA-Ala-GCA tRNA tRNA 1 74 -2 208 143 48 63 chr2 27608709 27608772 -225647811 + (CCCCAG)n Simple_repeat Simple_repeat 3 64 0 1301 89 0 0 chr2 27612472 27612641 -225643942 + AluSp SINE Alu 135 303 -10 1918 102 4 8 chr2 27613418 27613682 -225642901 + AluSx SINE Alu 1 263 -49 2099 131 0 0 chr2 27615457 27615755 -225640828 + AluSx SINE Alu 1 298 -14 270 333 121 6 chr2 27616408 27616573 -225640010 - MIR SINE MIR 0 262 79 2028 137 3 13 chr2 27616641 27616821 -225639762 - AluSx SINE Alu 0 312 135 2339 82 3 0 chr2 27616821 27617124 -225639459 - AluSg SINE Alu -6 304 1 2028 137 3 13 chr2 27617124 27617258 -225639325 - AluSx SINE Alu -177 135 1 2022 125 7 7 chr2 27617404 27617701 -225638882 - AluSq SINE Alu -12 301 5 2246 92 3 10 chr2 27617710 27618016 -225638567 - AluSp SINE Alu -9 304 1 283 296 0 0 chr2 27618794 27618865 -225637718 + L2 LINE L2 3242 3312 -1 2434 53 0 10 chr2 27618901 27619203 -225637380 + AluY SINE Alu 1 299 -12 1678 137 50 20 chr2 27619879 27620178 -225636405 - AluJb SINE Alu -3 309 2 2183 83 13 3 chr2 27620343 27620644 -225635939 - AluSx SINE Alu -8 304 1 234 330 43 26 chr2 27621067 27621182 -225635401 - L2 LINE L2 -15 3257 3141 251 232 244 0 chr2 27621182 27621264 -225635319 - MIR SINE MIR -1 261 160 1628 148 94 0 chr2 27621568 27621845 -225634738 + AluJb SINE Alu 1 303 -9 1762 139 16 29 chr2 27622253 27622389 -225634194 + AluJb SINE Alu 1 137 -175 2182 92 3 13 chr2 27622389 27622693 -225633890 + AluSg SINE Alu 1 301 -9 1762 139 16 29 chr2 27622693 27622865 -225633718 + AluJb SINE Alu 137 305 -7 302 208 125 0 chr2 27623411 27623483 -225633100 - MIR SINE MIR 0 262 182 1094 179 14 19 chr2 27623944 27624156 -225632427 + MER20 DNA MER1_type 9 219 0 289 270 147 37 chr2 27628901 27628965 -225627618 - MIR3 SINE MIR -4 204 148 2118 119 20 0 chr2 27628965 27629267 -225627316 + AluSx SINE Alu 1 308 -4 289 270 147 37 chr2 27629267 27629365 -225627218 - MIR3 SINE MIR -60 148 24 2191 107 3 0 chr2 27629955 27630254 -225626329 - AluSx SINE Alu -12 300 1 206 178 0 44 chr2 27630558 27630603 -225625980 + (CCA)n Simple_repeat Simple_repeat 3 45 0 938 108 20 7 chr2 27631195 27631207 -225625376 - AluSq/x SINE Alu -163 150 140 1923 128 14 0 chr2 27631207 27631497 -225625086 - AluSx SINE Alu -18 294 1 938 108 20 7 chr2 27631497 27631632 -225624951 - AluSq/x SINE Alu -173 140 1 202 288 27 27 chr2 27631822 27631933 -225624650 + L2 LINE L2 2305 2415 -899 623 239 42 7 chr2 27632350 27632492 -225624091 - MIR SINE MIR 0 262 116 2296 90 0 0 chr2 27633245 27633545 -225623038 - AluSg SINE Alu -10 300 1 461 304 8 0 chr2 27633679 27633804 -225622779 + MIR3 SINE MIR 60 185 -23 241 200 0 67 chr2 27634409 27634484 -225622099 + GA-rich Low_complexity Low_complexity 5 74 0 426 53 0 0 chr2 27636698 27636755 -225619828 + (TG)n Simple_repeat Simple_repeat 1 57 0 209 284 81 0 chr2 27637223 27637297 -225619286 - MIR SINE MIR -80 182 103 397 317 19 37 chr2 27637317 27637478 -225619105 + MIR SINE MIR 20 177 -85 186 43 0 0 chr2 27637986 27638009 -225618574 + (CCCCAG)n Simple_repeat Simple_repeat 6 28 0 485 214 95 8 chr2 27641056 27641182 -225615401 - L2 LINE L2 0 3272 3136 279 0 0 0 chr2 27642310 27642341 -225614242 + (CGGGG)n Simple_repeat Simple_repeat 5 35 0 234 271 86 0 chr2 27643212 27643282 -225613301 - MIR SINE MIR -109 153 78 249 33 0 0 chr2 27643685 27643715 -225612868 + (T)n Simple_repeat Simple_repeat 1 30 0 312 217 0 33 chr2 27643825 27643917 -225612666 - AluY SINE Alu -212 89 1 625 260 58 42 chr2 27644036 27644451 -225612132 + MLT1F1 LTR MaLR 1 418 -172 717 194 8 15 chr2 27644524 27644658 -225611925 - FLAM_C SINE Alu -10 133 1 270 186 17 0 chr2 27644660 27644719 -225611864 + MLT1F1 LTR MaLR 534 593 -2 740 181 188 0 chr2 27644732 27644881 -225611702 + MER45A DNA AcHobo 2 178 0 498 301 47 10 chr2 27644951 27645144 -225611439 + MIR SINE MIR 2 201 -61 229 376 93 28 chr2 27645142 27645496 -225611087 + L2 LINE L2 2595 2971 -343 * 1512 172 20 50 chr2 27645555 27645852 -225610731 + AluJo SINE Alu 1 288 -14 2304 78 14 0 chr2 27647112 27647407 -225609176 + AluSp SINE Alu 1 299 -14 2269 96 0 3 chr2 27647871 27648173 -225608410 + AluSx SINE Alu 1 301 -11 637 307 42 25 chr2 27648215 27648453 -225608130 + MIR SINE MIR 11 252 -10 261 303 26 0 chr2 27648493 27648569 -225608014 + MIR SINE MIR 64 141 -121 2187 73 0 43 chr2 27649072 27649373 -225607210 + AluY SINE Alu 1 288 -23 243 0 0 0 chr2 27649489 27649516 -225607067 + (T)n Simple_repeat Simple_repeat 1 27 0 2373 45 10 0 chr2 27649527 27649817 -225606766 + AluY SINE Alu 2 294 -17 526 309 127 72 chr2 27649936 27650107 -225606476 + L1ME LINE L1 2039 2199 -4016 1388 164 15 134 chr2 27650107 27650436 -225606147 + AluJb SINE Alu 1 290 -12 526 309 127 72 chr2 27650436 27650661 -225605922 + L1ME LINE L1 2199 3481 -2734 2850 109 113 107 chr2 27650718 27652042 -225604541 - pTR5 LTR ERV1 0 2438 743 1697 153 3 24 chr2 27652042 27652329 -225604254 + AluJo SINE Alu 31 311 -1 265 277 42 8 chr2 27652392 27652511 -225604072 + L1ME LINE L1 3442 3564 -2651 232 325 106 15 chr2 27652520 27652785 -225603798 + L1ME LINE L1 5600 5888 -302 192 283 0 0 chr2 27653417 27653470 -225603113 - L2 LINE L2 -4 3309 3257 561 309 133 19 chr2 27653595 27653805 -225602778 + MIR SINE MIR 4 237 -25 1667 59 5 0 chr2 27654015 27654219 -225602364 - AluSc SINE Alu -7 302 98 1759 172 10 3 chr2 27654319 27654616 -225601967 - AluJo SINE Alu -13 299 1 1890 140 3 35 chr2 27654618 27654932 -225601651 - AluSx SINE Alu -8 304 1 274 325 62 72 chr2 27655205 27655399 -225601184 - MIR SINE MIR -50 212 21 2284 88 3 0 chr2 27656062 27656359 -225600224 - AluSp SINE Alu -15 298 1 2357 97 0 0 chr2 27656650 27656960 -225599623 - AluSg SINE Alu 0 310 1 1786 172 7 7 chr2 27656979 27657276 -225599307 + AluJo SINE Alu 1 297 -15 1583 170 21 28 chr2 27657308 27657596 -225598987 - AluJb SINE Alu -26 286 1 201 291 58 39 chr2 27658363 27658466 -225598117 + MIR3 SINE MIR 91 195 -13 204 326 76 11 chr2 27659108 27659200 -225597383 - MIR SINE MIR -83 125 28 251 224 0 0 chr2 27659661 27659710 -225596873 - L2 LINE L2 -3 3310 3262 363 168 7 168 chr2 27663094 27663231 -225593352 - MIR3 SINE MIR -32 176 62 269 319 76 60 chr2 27663399 27663584 -225592999 + MIR3 SINE MIR 19 206 -2 258 231 51 39 chr2 27664155 27664233 -225592350 + MIR3 SINE MIR 106 184 -24 188 111 0 0 chr2 27664406 27664433 -225592150 + MER5B DNA MER1_type 6 32 -146 1021 219 27 9 chr2 27664445 27664664 -225591919 + AluJo SINE Alu 1 223 -89 488 144 18 90 chr2 27664665 27664776 -225591807 + AluJo SINE Alu 105 207 -105 639 189 76 8 chr2 27665122 27665254 -225591329 + FLAM_C SINE Alu 1 141 -2 528 299 86 23 chr2 27666776 27666997 -225589586 + MIR SINE MIR 28 262 0 1239 92 6 0 chr2 27669583 27669746 -225586837 - AluSg/x SINE Alu -17 293 130 207 100 0 0 chr2 27670081 27670111 -225586472 + (A)n Simple_repeat Simple_repeat 1 30 0 2198 92 0 0 chr2 27670349 27670653 -225585930 + AluSg SINE Alu 1 304 0 188 265 82 0 chr2 27670737 27670786 -225585797 - L2 LINE L2 -9 3263 3211 2319 98 0 0 chr2 27672185 27672491 -225584092 - AluSx SINE Alu -6 306 1 583 314 84 52 chr2 27672586 27673253 -225583330 + L1MEd LINE L1 1 515 -5604 2033 120 0 19 chr2 27673253 27673562 -225583021 - AluSx SINE Alu -9 303 1 583 314 84 52 chr2 27673562 27673886 -225582697 + L1MEd LINE L1 515 827 -5292 2169 115 0 0 chr2 27673895 27674199 -225582384 - AluSx SINE Alu -8 304 1 495 0 0 0 chr2 27674202 27674257 -225582326 + (TC)n Simple_repeat Simple_repeat 2 56 0 2026 127 7 0 chr2 27674257 27674541 -225582042 - AluSx SINE Alu -26 286 1 467 246 109 62 chr2 27674931 27675036 -225581547 + MIR SINE MIR 21 120 -142 2333 58 0 32 chr2 27675036 27675348 -225581235 - AluY SINE Alu -9 302 1 467 246 109 62 chr2 27675348 27675453 -225581130 + MIR SINE MIR 120 241 -21 519 293 91 16 chr2 27675461 27675703 -225580880 - L3 LINE CR1 -6 1571 1312 21 71 0 0 chr2 27676397 27676439 -225580144 + GC_rich Low_complexity Low_complexity 1 42 0 210 271 0 0 chr2 27676440 27676536 -225580047 + (CGTG)n Simple_repeat Simple_repeat 4 99 0 282 337 0 0 chr2 27676551 27676646 -225579937 + (TG)n Simple_repeat Simple_repeat 2 96 0 2148 73 0 24 chr2 27676886 27677204 -225579379 + AluY SINE Alu 1 311 0 2180 183 5 20 chr2 27677569 27677783 -225578800 + MLT1C LTR MaLR 1 217 -250 1659 161 45 87 chr2 27677783 27677857 -225578726 + MLT1A1 LTR MaLR 1 77 -288 1831 147 13 20 chr2 27677857 27678157 -225578426 + AluJo SINE Alu 1 298 -14 1659 161 45 87 chr2 27678157 27678461 -225578122 + MLT1A1 LTR MaLR 77 363 -2 2180 183 5 20 chr2 27678461 27678667 -225577916 + MLT1C LTR MaLR 217 414 -53 356 115 0 0 chr2 27678667 27678719 -225577864 - MER1B DNA MER1_type -3 326 275 888 104 7 22 chr2 27678743 27678878 -225577705 - AluSq/x SINE Alu -179 133 1 1506 129 73 35 chr2 27678883 27679169 -225577414 - MER1B DNA MER1_type -42 297 1 251 185 37 0 chr2 27679169 27679223 -225577360 + MLT1C LTR MaLR 412 467 0 982 245 109 19 chr2 27679302 27679677 -225576906 - MER74B LTR ERVL -5 617 209 310 151 0 0 chr2 27679710 27679763 -225576820 - MER74B LTR ERVL -569 53 1 690 294 233 9 chr2 27679781 27680308 -225576275 + L2 LINE L2 2327 2971 -343 489 272 96 7 chr2 27680393 27680529 -225576054 - MER5B DNA MER1_type -29 149 2 322 308 83 79 chr2 27681270 27681351 -225575232 - L1MDa LINE L1 -3949 2477 2398 2082 118 0 3 chr2 27681351 27681647 -225574936 + AluSx SINE Alu 1 295 -17 322 308 83 79 chr2 27681647 27681879 -225574704 - L1MDa LINE L1 -4028 2398 928 1734 100 0 0 chr2 27682314 27682545 -225574038 - AluSc SINE Alu -78 231 1 968 127 14 0 chr2 27682656 27682798 -225573785 - FRAM SINE Alu -32 144 1 272 184 58 68 chr2 27688537 27688640 -225567943 - MIR SINE MIR -70 192 91 22 0 0 0 chr2 27689481 27689503 -225567080 + GC_rich Low_complexity Low_complexity 1 22 0 1876 61 65 47 chr2 27689556 27689834 -225566749 + AluSp SINE Alu 14 296 -17 1268 161 27 65 chr2 27689840 27690132 -225566451 + AluJb SINE Alu 2 282 -30 203 118 59 0 chr2 27690219 27690253 -225566330 - MIR SINE MIR -90 118 83 2219 110 0 3 chr2 27690845 27691138 -225565445 - AluSx SINE Alu -17 295 6 1908 143 17 24 chr2 27691146 27691440 -225565143 - AluJo SINE Alu -10 302 11 244 261 0 78 chr2 27692565 27692707 -225563876 + G-rich Low_complexity Low_complexity 5 135 0 210 261 14 29 chr2 27693519 27693588 -225562995 + GA-rich Low_complexity Low_complexity 4 71 0 4363 166 27 1 chr2 27694446 27694862 -225561721 - L1MB7 LINE L1 -9 6175 5771 2346 119 0 0 chr2 27694862 27695172 -225561411 - AluSx SINE Alu -1 311 2 4363 166 27 1 chr2 27695172 27695594 -225560989 - L1MB7 LINE L1 -413 5771 5315 340 83 0 0 chr2 27695594 27695642 -225560941 - HY4 scRNA scRNA 0 93 46 2428 64 0 27 chr2 27695643 27695940 -225560643 - AluSg SINE Alu -21 289 1 2094 156 0 6 chr2 27695956 27696270 -225560313 - AluJb SINE Alu 0 312 1 1071 94 0 0 chr2 27696288 27696426 -225560157 - AluSg/x SINE Alu -11 299 162 3385 75 30 136 chr2 27696426 27696494 -225560089 + MER4A LTR ERV1 65 139 -525 2195 107 0 23 chr2 27696494 27696794 -225559789 + AluSx SINE Alu 1 293 -19 3385 75 30 136 chr2 27696794 27697116 -225559467 + MER4A LTR ERV1 139 357 -307 1723 158 54 0 chr2 27697116 27697394 -225559189 + AluJb SINE Alu 1 293 -19 3385 75 30 136 chr2 27697394 27697672 -225558911 + MER4A LTR ERV1 357 663 -1 4749 210 36 41 chr2 27697678 27698025 -225558558 - L1M4 LINE L1 -2154 3992 3645 1745 215 31 49 chr2 27698025 27698476 -225558107 + LTR47B LTR ERVL 1 443 0 4749 210 36 41 chr2 27698476 27698920 -225557663 - L1M4 LINE L1 -2501 3645 3200 2376 98 0 0 chr2 27698920 27699252 -225557331 - AluSq SINE Alu 0 313 1 4749 210 36 41 chr2 27699252 27699397 -225557186 - L1M4 LINE L1 -2946 3200 3056 2404 92 0 16 chr2 27699397 27699714 -225556869 - AluSq SINE Alu -1 312 1 4749 210 36 41 chr2 27699714 27700009 -225556574 - L1M4 LINE L1 -3090 3056 2764 2379 89 3 0 chr2 27700009 27700311 -225556272 - AluSp SINE Alu -4 309 7 4749 210 36 41 chr2 27700311 27700502 -225556081 - L1M4 LINE L1 -3382 2764 2574 914 157 0 44 chr2 27700527 27700686 -225555897 - FRAM SINE Alu -28 148 1 1901 177 29 26 chr2 27700756 27701140 -225555443 - MLT1F LTR MaLR -3 539 155 748 198 108 0 chr2 27701141 27701298 -225555285 - FAM SINE Alu 0 175 2 2348 95 7 0 chr2 27701311 27701617 -225554966 - AluSq SINE Alu -5 308 1 452 285 47 24 chr2 27701672 27701899 -225554684 - L1ME4a LINE L1 -187 5934 5729 314 89 0 36 chr2 27701915 27701955 -225554628 + (TTCC)n Simple_repeat Simple_repeat 3 42 -14 2232 99 0 7 chr2 27701955 27702248 -225554335 - AluY SINE Alu -20 291 1 314 89 0 36 chr2 27702248 27702263 -225554320 + (TTCC)n Simple_repeat Simple_repeat 42 56 0 2418 69 13 7 chr2 27702271 27702577 -225554006 - AluSc SINE Alu -1 308 1 201 291 139 12 chr2 27702821 27702888 -225553695 - L2 LINE L2 -89 3183 3106 537 291 128 18 chr2 27702888 27703115 -225553468 + MIR SINE MIR 2 253 -9 369 286 16 32 chr2 27704264 27704390 -225552193 - MIR3 SINE MIR -76 132 9 261 244 215 30 chr2 27704532 27704667 -225551916 + MIR3 SINE MIR 3 162 -46 439 249 259 10 chr2 27705683 27705884 -225550699 - MIR SINE MIR 0 262 12 28 0 0 0 chr2 27705990 27706018 -225550565 + AT_rich Low_complexity Low_complexity 1 28 0 2212 113 3 0 chr2 27706024 27706315 -225550268 - AluSx SINE Alu -20 292 1 1307 165 24 20 chr2 27706316 27706570 -225550013 - AluJo SINE Alu -9 303 49 341 21 0 21 chr2 27708186 27708233 -225548350 + (TTTTC)n Simple_repeat Simple_repeat 2 47 0 867 124 0 8 chr2 27708235 27708356 -225548227 - FLAM_C SINE Alu -23 120 1 2340 112 0 6 chr2 27710140 27710452 -225546131 + AluSg SINE Alu 1 310 0 1145 112 28 17 chr2 27710724 27710902 -225545681 + AluSx SINE Alu 1 180 -132 2507 55 0 29 chr2 27711073 27711383 -225545200 - AluY SINE Alu -10 301 1 1057 207 58 0 chr2 27711591 27711799 -225544784 + MER58A DNA MER1_type 5 224 0 351 233 23 0 chr2 27711807 27711893 -225544690 + Charlie1b DNA MER1_type 1 88 -435 1856 161 17 0 chr2 27711905 27712197 -225544386 + AluSx SINE Alu 1 297 -15 2198 126 3 7 chr2 27712200 27712509 -225544074 + AluSx SINE Alu 5 312 0 762 183 12 67 chr2 27712509 27712696 -225543887 + AluJb SINE Alu 134 312 0 1574 160 52 30 chr2 27712706 27713106 -225543477 + Charlie1b DNA MER1_type 110 518 -5 2695 115 0 0 chr2 27714852 27715227 -225541356 - THE1C LTR MaLR 0 375 1 2233 99 10 13 chr2 27715311 27715481 -225541102 - AluSq SINE Alu -10 303 133 1882 123 51 27 chr2 27715481 27715774 -225540809 - AluSq SINE Alu -13 300 1 2233 99 10 13 chr2 27715774 27715907 -225540676 - AluSq SINE Alu -180 133 1 693 163 37 52 chr2 27715920 27716055 -225540528 - FLAM_A SINE Alu 0 133 1 1917 146 3 22 chr2 27716496 27716812 -225539771 - AluJb SINE Alu -2 310 1 778 57 9 9 chr2 27716842 27716948 -225539635 - LTR23 LTR ERV1 -12 425 320 392 206 21 10 chr2 27716932 27717029 -225539554 + LTR23 LTR ERV1 340 437 0 * 492 306 70 55 chr2 27717414 27717757 -225538826 + MER4B-int LTR ERV1 346 693 -6065 3233 76 9 38 chr2 27717804 27717903 -225538680 + MER57B LTR ERV1 2 102 -332 2247 124 0 0 chr2 27717903 27718194 -225538389 + AluSx SINE Alu 8 298 -14 3233 76 9 38 chr2 27718194 27718540 -225538043 + MER57B LTR ERV1 102 434 0 398 209 0 12 chr2 27718798 27718884 -225537699 + MER4B-int LTR ERV1 1557 1641 -4690 642 140 0 0 chr2 27718887 27718994 -225537589 + MER72 LTR ERV1 1 107 -615 2876 99 59 60 chr2 27718994 27719159 -225537424 - MER4B LTR ERV1 0 779 615 2480 69 3 3 chr2 27719159 27719462 -225537121 + AluY SINE Alu 1 303 -8 2876 99 59 60 chr2 27719462 27719902 -225536681 - MER4B LTR ERV1 -164 615 1 755 153 0 15 chr2 27719903 27720040 -225536543 + MER4D LTR ERV1 105 239 -664 982 234 43 67 chr2 27720142 27720488 -225536095 + LTR10B LTR ERV1 210 547 0 21 36 0 0 chr2 27720532 27720560 -225536023 + AT_rich Low_complexity Low_complexity 1 28 0 3374 165 12 48 chr2 27720682 27721009 -225535574 + MER4D LTR ERV1 238 529 -374 2037 149 0 13 chr2 27721009 27721318 -225535265 - AluSx SINE Alu -1 311 7 3374 165 12 48 chr2 27721318 27721673 -225534910 + MER4D LTR ERV1 529 895 -8 913 158 45 25 chr2 27721719 27721921 -225534662 + LTR49-int LTR ERV1 1670 1875 -4456 1010 69 35 0 chr2 27721927 27722072 -225534511 + LTR56 LTR ERV1 188 337 -108 707 286 48 22 chr2 27722090 27722446 -225534137 + L1ME LINE L1 8 372 -5747 630 292 43 78 chr2 27722473 27722557 -225534026 + L1ME LINE L1 561 646 -5473 1925 177 0 0 chr2 27722557 27722862 -225533721 + AluJb SINE Alu 1 305 -7 630 292 43 78 chr2 27722862 27723223 -225533360 + L1ME LINE L1 646 986 -5133 2192 132 0 6 chr2 27723223 27723534 -225533049 + AluSx SINE Alu 3 311 -1 630 292 43 78 chr2 27723534 27723625 -225532958 + L1ME LINE L1 986 1079 -5040 * 696 255 28 47 chr2 27723609 27723931 -225532652 + L1ME LINE L1 5007 5322 -807 1003 165 0 17 chr2 27723937 27724113 -225532470 - FRAM SINE Alu -3 173 1 479 186 137 0 chr2 27724113 27724237 -225532346 + L1ME LINE L1 5317 5457 -690 2537 65 0 7 chr2 27724273 27724579 -225532004 + AluSx SINE Alu 1 304 -8 289 258 0 0 chr2 27724579 27724633 -225531950 + L1ME LINE L1 5662 5718 -435 587 203 84 0 chr2 27724648 27724791 -225531792 + LTR50 LTR ERVL 59 213 -582 376 254 42 34 chr2 27724843 27724885 -225531698 + LTR50 LTR ERVL 326 366 -429 2130 133 0 0 chr2 27724885 27725186 -225531397 + AluSx SINE Alu 1 301 -11 376 254 42 34 chr2 27725186 27725319 -225531264 + LTR50 LTR ERVL 366 585 -210 391 121 30 0 chr2 27725401 27725467 -225531116 + LTR50 LTR ERVL 728 795 0 1111 129 12 6 chr2 27725536 27725699 -225530884 - FRAM SINE Alu -1 165 2 1792 143 43 7 chr2 27726013 27726292 -225530291 - AluJo SINE Alu -9 303 15 838 164 217 5 chr2 27726370 27726577 -225530006 + AluJo SINE Alu 48 298 -14 418 307 53 22 chr2 27726577 27726935 -225529648 - L1MEc LINE L1 -4746 1650 1282 776 157 31 13 chr2 27727398 27727557 -225529026 + AluSc SINE Alu 140 301 -8 247 274 0 0 chr2 27727558 27727609 -225528974 + L1ME LINE L1 5685 5735 -435 587 203 84 0 chr2 27727624 27727767 -225528816 + LTR50 LTR ERVL 59 213 -582 376 260 42 34 chr2 27727819 27727861 -225528722 + LTR50 LTR ERVL 326 366 -429 2130 133 0 0 chr2 27727861 27728162 -225528421 + AluSx SINE Alu 1 301 -11 376 260 42 34 chr2 27728162 27728295 -225528288 + LTR50 LTR ERVL 366 585 -210 391 121 30 0 chr2 27728377 27728443 -225528140 + LTR50 LTR ERVL 728 795 0 1111 129 12 6 chr2 27728512 27728675 -225527908 - FRAM SINE Alu -1 165 2 1710 158 47 30 chr2 27728992 27729290 -225527293 - AluJb SINE Alu -9 303 1 2141 117 0 39 chr2 27730337 27730646 -225525937 + AluSg SINE Alu 1 297 -13 2417 298 67 62 chr2 27731526 27733069 -225523514 + L2 LINE L2 443 1994 -1320 741 179 0 36 chr2 27733071 27733211 -225523372 - FRAM SINE Alu 0 40 1 2366 97 3 0 chr2 27733303 27733611 -225522972 - AluSp SINE Alu -4 309 1 771 222 54 52 chr2 27733662 27733941 -225522642 + L1MC/D LINE L1 5174 5458 -834 1945 149 0 3 chr2 27733941 27734258 -225522325 + AluSx SINE Alu 1 316 0 771 222 54 52 chr2 27734258 27734339 -225522244 + L1MC/D LINE L1 5458 5537 -755 351 0 0 0 chr2 27734447 27734486 -225522097 + (CA)n Simple_repeat Simple_repeat 2 40 0 1116 135 0 18 chr2 27734555 27734718 -225521865 - FRAM SINE Alu -8 168 9 2319 122 0 3 chr2 27734796 27735107 -225521476 - AluSx SINE Alu -2 310 1 1798 143 10 51 chr2 27735109 27735423 -225521160 - AluJb SINE Alu -11 301 1 524 264 83 61 chr2 27735796 27736103 -225520480 - MLT1L LTR MaLR -4 611 213 1882 166 7 10 chr2 27736196 27736504 -225520079 - AluJo SINE Alu -5 307 1 2466 206 6 61 chr2 27736504 27737032 -225519551 - L1M4 LINE L1 -1867 4279 3792 191 61 30 0 chr2 27737032 27737065 -225519518 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2466 206 6 61 chr2 27737065 27737191 -225519392 - L1M4 LINE L1 -2354 3792 3661 975 169 226 24 chr2 27737335 27737583 -225519000 - AluY SINE Alu 0 311 14 2241 113 10 0 chr2 27737949 27738250 -225518333 + AluSq SINE Alu 1 304 -9 2239 125 0 0 chr2 27738822 27739125 -225517458 - AluSx SINE Alu -9 303 1 1885 156 18 0 chr2 27739352 27739634 -225516949 + AluSx SINE Alu 3 289 -23 344 276 62 21 chr2 27739969 27740114 -225516469 + L1ME LINE L1 334 484 -5586 370 286 45 62 chr2 27740121 27740299 -225516284 + L1ME LINE L1 383 557 -5513 1576 170 3 35 chr2 27740329 27740640 -225515943 + AluJo SINE Alu 12 312 0 269 202 117 91 chr2 27740714 27740876 -225515707 + L1ME LINE L1 606 772 -5308 617 161 21 0 chr2 27740876 27740999 -225515584 + MSTD LTR MaLR 69 193 -203 2190 116 7 7 chr2 27740999 27741301 -225515282 + AluSx SINE Alu 1 302 -10 966 165 5 48 chr2 27741374 27741562 -225515021 + MSTD LTR MaLR 217 396 0 395 192 77 90 chr2 27741562 27741718 -225514865 - HAL1 LINE L1 -2332 175 22 198 0 0 0 chr2 27742633 27742655 -225513928 + (CA)n Simple_repeat Simple_repeat 2 23 0 442 70 14 14 chr2 27742742 27742813 -225513770 + MER53 DNA DNA 1 71 -118 875 268 72 27 chr2 27742818 27743260 -225513323 + MLT1L LTR MaLR 119 611 -4 2201 112 3 13 chr2 27743817 27744122 -225512461 - AluSq SINE Alu -11 302 1 262 313 180 14 chr2 27744197 27744475 -225512108 - L1MC4a LINE L1 -1741 6067 5744 614 293 76 50 chr2 27745006 27745170 -225511413 - L1MC4a LINE L1 -2057 5751 5593 2321 121 0 0 chr2 27745170 27745475 -225511108 + AluSx SINE Alu 1 305 -7 614 293 76 50 chr2 27745475 27745795 -225510788 - L1MC4a LINE L1 -2215 5593 5254 863 162 0 108 chr2 27745879 27746064 -225510519 + AluSg/x SINE Alu 135 299 -11 2255 95 10 13 chr2 27746105 27746409 -225510174 + AluSp SINE Alu 1 303 -10 781 251 15 10 chr2 27746494 27746693 -225509890 + L1MB8 LINE L1 4803 5002 -1144 1621 175 8 0 chr2 27746694 27746940 -225509643 + AluJb SINE Alu 50 297 -15 2475 86 0 0 chr2 27746941 27747242 -225509341 + AluSg SINE Alu 1 301 -9 294 242 30 0 chr2 27747243 27747309 -225509274 + L1MC2 LINE L1 6223 6290 -54 207 0 0 0 chr2 27747311 27747334 -225509249 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 888 144 95 10 chr2 27747363 27747471 -225509112 + L1MB8 LINE L1 5417 5514 -664 2221 75 14 3 chr2 27747471 27747780 -225508803 - AluSx SINE Alu 0 312 1 888 144 95 10 chr2 27747780 27747951 -225508632 + L1MB8 LINE L1 5514 5965 -213 671 204 133 11 chr2 27747958 27748139 -225508444 + L1MC/D LINE L1 746 948 -5592 367 224 60 60 chr2 27748663 27748797 -225507786 + L1MC/D LINE L1 4960 5093 -1447 335 300 60 69 chr2 27748847 27749080 -225507503 + L1MC/D LINE L1 5207 5437 -1103 2572 59 3 7 chr2 27749162 27749469 -225507114 + AluY SINE Alu 1 306 -5 1271 109 0 0 chr2 27749469 27749634 -225506949 + AluSg/x SINE Alu 132 296 -14 378 309 88 60 chr2 27749755 27749972 -225506611 + L1MC/D LINE L1 5649 5871 -2331 248 323 15 0 chr2 27749986 27750116 -225506467 - L1M4 LINE L1 -3173 2973 2842 1762 167 0 37 chr2 27750128 27750427 -225506156 + AluJb SINE Alu 1 288 -24 549 44 0 0 chr2 27750427 27750495 -225506088 + (GGAA)n Simple_repeat Simple_repeat 3 70 0 2385 94 0 0 chr2 27750772 27751069 -225505514 - AluY SINE Alu -14 297 1 262 213 64 11 chr2 27751077 27751171 -225505412 - L1MC4a LINE L1 -1857 5951 5853 1767 91 0 0 chr2 27751280 27751499 -225505084 + AluSq SINE Alu 1 219 -94 580 165 8 33 chr2 27751499 27751620 -225504963 + AluSp/q SINE Alu 188 305 -8 287 296 148 6 chr2 27751785 27751947 -225504636 - L1ME3A LINE L1 -208 5962 5778 207 88 0 0 chr2 27751984 27752018 -225504565 + (TTTTG)n Simple_repeat Simple_repeat 3 36 0 1049 158 224 70 chr2 27752020 27752261 -225504322 - AluJb SINE Alu -34 278 1 401 265 0 0 chr2 27752311 27752394 -225504189 + Charlie1a DNA MER1_type 1 83 -1372 1405 44 0 11 chr2 27752398 27752579 -225504004 - L1PA3 LINE L1 0 6155 5977 1772 5 0 0 chr2 27752579 27752784 -225503799 + L1PA3 LINE L1 5656 5860 -295 650 184 6 54 chr2 27752784 27752952 -225503631 + Charlie1a DNA MER1_type 72 231 -1224 626 184 0 40 chr2 27753000 27753125 -225503458 + AluSg/x SINE Alu 178 297 -13 455 161 0 35 chr2 27753126 27753213 -225503370 - MER112 DNA MER1_type -176 84 1 2342 75 48 3 chr2 27754000 27754293 -225502290 + AluSg1 SINE Alu 1 306 -3 1609 170 23 0 chr2 27754962 27755227 -225501356 - AluJo SINE Alu -5 307 37 2265 114 7 7 chr2 27759005 27759312 -225497271 + AluSx SINE Alu 1 307 -5 217 314 46 26 chr2 27760828 27760967 -225495616 + MIR3 SINE MIR 21 162 -46 235 288 151 0 chr2 27761094 27761167 -225495416 - L3 LINE CR1 -2 1575 1492 1369 59 10 49 chr2 27762334 27762537 -225494046 - MER107 DNA MER1_type -2 195 1 200 305 12 12 chr2 27762704 27762786 -225493797 + CT-rich Low_complexity Low_complexity 4 85 0 384 325 16 0 chr2 27765883 27766009 -225490574 - MIR3 SINE MIR -66 142 15 308 258 65 102 chr2 27766113 27766299 -225490284 - MIR SINE MIR -4 258 80 1817 100 0 54 chr2 27767222 27767481 -225489102 - AluSg SINE Alu -20 290 46 2582 30 0 7 chr2 27767535 27767830 -225488753 + AluY SINE Alu 17 309 -2 27 62 0 0 chr2 27768725 27768773 -225487810 + GC_rich Low_complexity Low_complexity 1 48 0 830 99 0 25 chr2 27770701 27770822 -225485761 - AluSp/q SINE Alu -3 310 193 202 308 142 25 chr2 27770950 27771070 -225485513 + L2 LINE L2 3139 3272 0 545 200 35 83 chr2 27771299 27771343 -225485240 + MER3 DNA MER1_type 1 46 -116 2395 86 7 0 chr2 27771343 27771633 -225484950 + AluSg SINE Alu 1 292 -18 545 200 35 83 chr2 27771633 27771733 -225484850 + MER3 DNA MER1_type 46 138 -71 731 159 38 15 chr2 27771737 27771869 -225484714 - AluJb SINE Alu -176 136 2 307 190 0 0 chr2 27771878 27771936 -225484647 + MER3 DNA MER1_type 152 209 0 1301 164 78 108 chr2 27772685 27773147 -225483436 - LTR7 LTR ERV1 -2 448 1 1289 178 0 14 chr2 27776107 27776326 -225480257 - AluJb SINE Alu -13 299 84 2204 115 10 0 chr2 27776347 27776652 -225479931 - AluSp SINE Alu -5 308 1 237 285 113 38 chr2 27776742 27776928 -225479655 + L2 LINE L2 3100 3299 -14 1788 144 10 39 chr2 27777129 27777434 -225479149 + AluJb SINE Alu 1 296 -16 2340 106 0 3 chr2 27777439 27777750 -225478833 + AluY SINE Alu 1 310 -1 844 237 147 21 chr2 27778350 27778819 -225477764 - L1MC5 LINE L1 -178 7783 7256 2355 105 0 0 chr2 27779913 27780219 -225476364 + AluSx SINE Alu 4 309 -3 259 293 197 14 chr2 27780954 27781101 -225475482 + MIR3 SINE MIR 35 208 0 2376 95 3 19 chr2 27782057 27782373 -225474210 - AluSp SINE Alu -2 311 1 681 234 21 0 chr2 27785208 27785349 -225471234 + FRAM SINE Alu 2 145 -31 1976 113 29 4 chr2 27785351 27785646 -225470937 - AluSp SINE Alu 0 302 1 2480 84 0 3 chr2 27785671 27785979 -225470604 - AluSc SINE Alu -2 307 1 1280 201 28 32 chr2 27786038 27786321 -225470262 - AluJo SINE Alu -20 292 11 2238 117 3 0 chr2 27786357 27786657 -225469926 + AluSg SINE Alu 1 301 -9 2215 110 7 0 chr2 27786717 27787007 -225469576 + AluSq SINE Alu 1 292 -21 2045 104 58 0 chr2 27787121 27787399 -225469184 + AluSq SINE Alu 1 294 -19 2421 83 0 3 chr2 27787755 27788067 -225468516 - AluY SINE Alu 0 311 1 444 265 38 23 chr2 27788509 27788641 -225467942 - MIR SINE MIR -108 154 21 953 148 11 85 chr2 27792464 27792653 -225463930 + AluJb SINE Alu 129 303 -9 234 259 84 21 chr2 27793901 27794044 -225462539 - L1ME LINE L1 -369 5752 5601 2254 105 3 10 chr2 27794388 27794694 -225461889 - AluSx SINE Alu -3 309 6 329 265 138 50 chr2 27795321 27795568 -225461015 + L2 LINE L2 2777 3049 -264 270 0 0 0 chr2 27795616 27795646 -225460937 + (CA)n Simple_repeat Simple_repeat 2 31 0 205 200 0 0 chr2 27795646 27795686 -225460897 + (TA)n Simple_repeat Simple_repeat 1 40 0 1913 138 50 0 chr2 27795686 27795969 -225460614 - AluJb SINE Alu -15 297 1 622 96 4 3 chr2 27796132 27796362 -225460221 + AluSg SINE Alu 1 297 -13 465 204 48 10 chr2 27796383 27796486 -225460097 + L2 LINE L2 3201 3307 -6 207 227 160 40 chr2 27796681 27796756 -225459827 + L2 LINE L2 3188 3271 -1 181 286 143 0 chr2 27796796 27796880 -225459703 - MIR SINE MIR -65 197 102 463 307 34 3 chr2 27797204 27797368 -225459215 + MIR SINE MIR 20 141 -67 528 245 116 19 chr2 27797705 27797860 -225458723 - MIR3 SINE MIR -9 199 30 292 186 51 0 chr2 27798183 27798242 -225458341 + MIR SINE MIR 128 189 -73 1293 119 11 0 chr2 27798973 27799150 -225457433 - AluSg/x SINE Alu -2 308 130 2380 103 0 10 chr2 27799350 27799662 -225456921 + AluSc SINE Alu 1 309 0 1954 78 112 4 chr2 27800116 27800385 -225456198 - AluYa8 SINE Alu -12 298 1 260 333 133 0 chr2 27800505 27800625 -225455958 - L2 LINE L2 0 3272 3137 1926 218 120 107 chr2 27800626 27800667 -225455916 - L2 LINE L2 -1 3312 3273 231 61 0 0 chr2 27800667 27800700 -225455883 + (CAGTA)n Simple_repeat Simple_repeat 3 35 0 1926 218 120 107 chr2 27800700 27800892 -225455691 - L2 LINE L2 -40 3273 3085 2449 87 3 10 chr2 27800892 27801204 -225455379 - AluSx SINE Alu -2 310 1 1926 218 120 107 chr2 27801204 27801941 -225454642 - L2 LINE L2 -228 3085 2358 2118 133 7 3 chr2 27801941 27802242 -225454341 - AluSx SINE Alu -10 302 1 1926 218 120 107 chr2 27802242 27802253 -225454330 - L2 LINE L2 -955 2358 2349 376 204 41 20 chr2 27802253 27802351 -225454232 - L1MC5 LINE L1 -36 7925 7826 1926 218 120 107 chr2 27802351 27802566 -225454017 - L2 LINE L2 -964 2349 2005 1159 158 0 0 chr2 27802638 27802809 -225453774 + AluJb SINE Alu 142 312 0 234 241 19 0 chr2 27802845 27802899 -225453684 - L2 LINE L2 -202 3070 3016 395 202 97 116 chr2 27803002 27803260 -225453323 - L2 LINE L2 -38 3234 2982 216 0 0 0 chr2 27804490 27804514 -225452069 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 255 277 103 0 chr2 27805080 27805203 -225451380 + MIR SINE MIR 23 155 -61 291 54 0 0 chr2 27806348 27806385 -225450198 + (CCCCCG)n Simple_repeat Simple_repeat 5 41 0 2316 94 7 10 chr2 27806462 27806769 -225449814 + AluSq SINE Alu 1 306 -7 201 133 0 0 chr2 27807121 27807151 -225449432 + L3 LINE CR1 1424 1453 -124 2221 104 0 47 chr2 27807410 27807728 -225448855 - AluSx SINE Alu -9 303 1 2138 104 7 4 chr2 27807736 27808048 -225448535 - AluSg SINE Alu 0 313 1 203 189 0 0 chr2 27808703 27808740 -225447843 + (TTG)n Simple_repeat Simple_repeat 3 39 0 2471 92 0 9 chr2 27808885 27809200 -225447383 + AluSx SINE Alu 1 312 0 2508 93 0 0 chr2 27809211 27809521 -225447062 + AluSg SINE Alu 1 310 0 194 0 39 0 chr2 27809765 27809791 -225446792 + (TTG)n Simple_repeat Simple_repeat 1 27 0 1742 129 39 25 chr2 27809804 27810083 -225446500 - AluSx SINE Alu -28 284 2 1854 179 0 35 chr2 27810117 27810436 -225446147 + AluJb SINE Alu 1 308 -4 191 114 29 0 chr2 27810436 27810471 -225446112 + GA-rich Low_complexity Low_complexity 1 36 0 245 111 0 0 chr2 27811986 27812022 -225444561 + U2 snRNA snRNA 1 36 -152 450 53 0 0 chr2 27814252 27814309 -225442274 + (CA)n Simple_repeat Simple_repeat 1 57 0 2312 116 0 0 chr2 27814340 27814643 -225441940 + AluSg SINE Alu 1 303 -7 507 161 0 45 chr2 27816098 27816210 -225440373 - FLAM_A SINE Alu 0 142 36 1847 166 3 16 chr2 27817150 27817458 -225439125 - AluJb SINE Alu -8 304 1 1706 181 17 27 chr2 27817479 27817778 -225438805 - AluJo SINE Alu -16 296 1 474 237 23 15 chr2 27819104 27819235 -225437348 - Charlie4a DNA MER1_type -10 498 367 457 206 95 32 chr2 27819235 27819296 -225437287 + MER106B DNA MER1_type 1 57 -1002 2133 93 4 4 chr2 27819296 27819566 -225437017 - AluSp SINE Alu -43 270 1 457 206 95 32 chr2 27819566 27819690 -225436893 + MER106B DNA MER1_type 57 1022 -37 704 165 0 0 chr2 27819692 27819801 -225436782 + FLAM_A SINE Alu 8 116 -26 2422 102 0 0 chr2 27819810 27820115 -225436468 - AluSx SINE Alu -1 311 7 26 0 0 0 chr2 27820139 27820165 -225436418 + AT_rich Low_complexity Low_complexity 1 26 0 1021 181 32 48 chr2 27820204 27820336 -225436247 - Charlie4a DNA MER1_type -1581 380 249 1820 97 85 0 chr2 27820336 27820622 -225435961 + AluY SINE Alu 1 308 0 1021 181 32 48 chr2 27820622 27820734 -225435849 - Charlie4a DNA MER1_type -1712 249 137 275 143 71 79 chr2 27820925 27821021 -225435562 + MER113 DNA MER1_type? 11 107 -414 2127 146 0 3 chr2 27821021 27821330 -225435253 + AluSq SINE Alu 1 308 -5 275 143 71 79 chr2 27821330 27821359 -225435224 + MER113 DNA MER1_type? 107 135 -386 1206 187 13 18 chr2 27822242 27822467 -225434116 + AluJo SINE Alu 6 229 -83 1694 172 87 12 chr2 27822488 27822890 -225433693 - L1MB3 LINE L1 0 6183 5752 2244 89 3 10 chr2 27823688 27824017 -225432566 + AluSx SINE Alu 1 312 0 1657 168 33 0 chr2 27824065 27824369 -225432214 - AluJb SINE Alu 0 313 1 838 248 4 69 chr2 27824392 27824558 -225432025 + MIR SINE MIR 1 147 -115 2264 97 7 7 chr2 27824558 27824858 -225431725 + AluSc SINE Alu 1 300 -9 838 248 4 69 chr2 27824858 27824937 -225431646 + MIR SINE MIR 147 230 -32 2447 95 0 7 chr2 27825321 27825627 -225430956 - AluSx SINE Alu -8 304 1 281 299 144 0 chr2 27827024 27827121 -225429462 + L2 LINE L2 3203 3313 0 2146 100 78 0 chr2 27828256 27828537 -225428046 + AluSx SINE Alu 1 303 -9 189 0 0 0 chr2 27831686 27831707 -225424876 + (T)n Simple_repeat Simple_repeat 1 21 0 194 175 50 0 chr2 27833051 27833091 -225423492 - MIR SINE MIR -60 148 107 2121 103 21 3 chr2 27833095 27833385 -225423198 + AluSq SINE Alu 5 299 -14 2262 119 0 16 chr2 27834330 27834640 -225421943 - AluSx SINE Alu -7 305 1 253 269 30 0 chr2 27834794 27834861 -225421722 - MIR SINE MIR -30 232 164 1726 165 3 38 chr2 27835062 27835378 -225421205 - AluJb SINE Alu -7 305 1 700 158 0 86 chr2 27835380 27835444 -225421139 - FLAM_C SINE Alu -172 140 72 2557 34 41 3 chr2 27835444 27835739 -225420844 - AluY SINE Alu -5 306 1 700 158 0 86 chr2 27835739 27835826 -225420757 - FLAM_C SINE Alu -240 72 2 200 316 132 11 chr2 27836125 27836299 -225420284 - L2 LINE L2 -830 2484 2290 411 226 118 0 chr2 27836353 27836455 -225420128 + L2 LINE L2 3195 3308 -5 2658 54 0 6 chr2 27836981 27837294 -225419289 + AluY SINE Alu 1 311 0 722 192 0 0 chr2 27838156 27838281 -225418302 + FLAM_A SINE Alu 4 128 -5 217 193 24 48 chr2 27839140 27839223 -225417360 + C-rich Low_complexity Low_complexity 3 83 0 286 255 176 0 chr2 27839737 27839839 -225416744 - MIR SINE MIR -115 147 28 185 311 75 19 chr2 27839958 27840064 -225416519 + MIR3 SINE MIR 81 192 -16 1554 82 0 29 chr2 27840845 27841012 -225415571 - AluSg/x SINE Alu -13 299 138 2432 88 3 0 chr2 27841012 27841307 -225415276 - AluSp SINE Alu -17 296 1 1554 82 0 29 chr2 27841307 27841347 -225415236 - AluSg/x SINE Alu -174 138 98 1976 158 0 0 chr2 27841347 27841632 -225414951 - AluJb SINE Alu -27 285 1 1939 144 6 44 chr2 27841634 27841953 -225414630 - AluJo SINE Alu -3 309 3 2062 145 3 3 chr2 27841962 27842259 -225414324 - AluJo SINE Alu -15 297 1 372 22 0 0 chr2 27843053 27843098 -225413485 + (CA)n Simple_repeat Simple_repeat 2 46 0 249 33 0 0 chr2 27843439 27843469 -225413114 + (CTGGGG)n Simple_repeat Simple_repeat 1 30 0 180 152 0 0 chr2 27844515 27844548 -225412035 + (TG)n Simple_repeat Simple_repeat 1 33 0 531 266 80 34 chr2 27845778 27846015 -225410568 + MIR SINE MIR 1 248 -14 292 226 77 54 chr2 27846647 27846815 -225409768 + L1ME4a LINE L1 5946 6117 -4 301 233 55 0 chr2 27847432 27847505 -225409078 - MIR3 SINE MIR -4 204 128 2233 98 0 0 chr2 27847507 27847804 -225408779 + AluSc SINE Alu 1 297 -12 876 156 0 0 chr2 27847805 27847946 -225408637 - FRAM SINE Alu -35 141 1 230 308 67 10 chr2 27847946 27848050 -225408533 - MIR3 SINE MIR -49 159 50 23 0 0 0 chr2 27850394 27850417 -225406166 + GC_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr2 27851000 27851025 -225405558 + GC_rich Low_complexity Low_complexity 1 25 0 1982 66 81 11 chr2 27851293 27851564 -225405019 + AluY SINE Alu 9 298 -13 264 249 49 100 chr2 27851570 27851834 -225404749 + L1MEd LINE L1 1001 1344 -1146 474 271 94 54 chr2 27852322 27852525 -225404058 + MIR SINE MIR 38 248 -14 228 328 16 0 chr2 27852556 27852620 -225403963 + MIR SINE MIR 42 106 -102 287 350 44 22 chr2 27852971 27853151 -225403432 + MIR SINE MIR 9 192 -70 21 0 0 0 chr2 27854808 27854829 -225401754 + GC_rich Low_complexity Low_complexity 1 21 0 312 282 107 8 chr2 27856111 27856205 -225400378 + MIR3 SINE MIR 42 154 -54 2362 87 0 0 chr2 27856205 27856514 -225400069 + AluSg SINE Alu 1 309 -1 312 282 107 8 chr2 27856514 27856550 -225400033 + MIR3 SINE MIR 154 185 -23 204 121 0 0 chr2 27856786 27856819 -225399764 - L2 LINE L2 -9 3304 3272 2025 96 36 0 chr2 27857229 27857509 -225399074 - AluSx SINE Alu -22 290 1 2268 94 0 13 chr2 27857847 27858156 -225398427 - AluSg SINE Alu -5 305 1 1889 151 3 19 chr2 27858157 27858474 -225398109 - AluJo SINE Alu 0 312 1 374 290 142 18 chr2 27860532 27860701 -225395882 - MIR3 SINE MIR -7 201 12 2013 137 3 0 chr2 27860829 27861121 -225395462 - AluSx SINE Alu -19 293 1 1815 155 23 16 chr2 27861152 27861461 -225395122 + AluJo SINE Alu 1 311 -1 195 273 227 55 chr2 27862609 27862654 -225393929 - MIR SINE MIR -72 190 154 225 94 0 0 chr2 27862654 27862686 -225393897 + (TTCA)n Simple_repeat Simple_repeat 3 34 0 2149 102 0 0 chr2 27862686 27862971 -225393612 - AluSx SINE Alu -27 285 1 195 273 227 55 chr2 27862971 27863052 -225393531 - MIR SINE MIR -107 155 41 344 219 14 0 chr2 27863335 27863408 -225393175 - MIR SINE MIR -105 103 30 306 293 50 7 chr2 27864615 27864755 -225391828 + MIR3 SINE MIR 48 193 -15 2053 121 10 0 chr2 27865167 27865474 -225391109 - AluSx SINE Alu -2 310 1 2075 96 39 0 chr2 27865474 27865755 -225390828 - AluSx SINE Alu -20 292 1 2188 86 0 0 chr2 27865862 27866171 -225390412 - AluSx SINE Alu 0 311 3 832 161 22 83 chr2 27866433 27866663 -225389920 + AluJo SINE Alu 87 302 -10 1872 156 0 3 chr2 27866763 27867064 -225389519 + AluSx SINE Alu 13 312 0 2165 112 0 3 chr2 27867064 27867369 -225389214 + AluSg SINE Alu 1 304 -6 2234 95 10 0 chr2 27867436 27867742 -225388841 - AluSq SINE Alu -4 309 1 241 384 0 30 chr2 27867754 27867887 -225388696 - MIR SINE MIR -124 138 10 273 282 86 55 chr2 27870713 27870876 -225385707 + MIR3 SINE MIR 18 185 -23 267 196 0 0 chr2 27871019 27871070 -225385513 + MIR3 SINE MIR 155 205 -3 304 231 131 62 chr2 27871416 27871546 -225385037 + MIR SINE MIR 30 168 -94 2006 117 3 10 chr2 27872201 27872492 -225384091 - AluSx SINE Alu -23 289 1 436 275 161 21 chr2 27872913 27873149 -225383434 + L3 LINE CR1 1140 1408 -169 2197 69 17 3 chr2 27874435 27874724 -225381859 - AluY SINE Alu -18 293 1 2155 99 10 0 chr2 27874726 27875019 -225381564 - AluSq SINE Alu -17 296 1 519 156 0 56 chr2 27875045 27875065 -225381518 + AluJo SINE Alu 33 53 -259 4308 85 0 18 chr2 27875065 27875453 -225381130 + MER41A LTR ERV1 1 377 -177 2137 115 7 0 chr2 27875453 27875757 -225380826 + AluSq SINE Alu 1 306 -7 4308 85 0 18 chr2 27875757 27875932 -225380651 + MER41A LTR ERV1 377 554 0 519 156 0 56 chr2 27875932 27876001 -225380582 + AluJo SINE Alu 53 117 -195 1536 131 40 24 chr2 27876016 27876268 -225380315 - AluJb SINE Alu -21 291 36 194 133 0 22 chr2 27876276 27876321 -225380262 + (CTA)n Simple_repeat Simple_repeat 1 44 0 817 170 15 78 chr2 27876385 27876422 -225380161 + AluJo SINE Alu 104 142 -170 2147 89 3 3 chr2 27876422 27876747 -225379836 + AluSq SINE Alu 4 313 0 817 170 15 78 chr2 27876747 27876915 -225379668 + AluJo SINE Alu 142 296 -16 1508 123 131 0 chr2 27876919 27877171 -225379412 + AluSx SINE Alu 2 286 -16 369 0 0 0 chr2 27877174 27877215 -225379368 + (TAGA)n Simple_repeat Simple_repeat 3 43 0 856 230 6 6 chr2 27877216 27877381 -225379202 + FRAM SINE Alu 1 165 -1 228 182 0 0 chr2 27878828 27878872 -225377711 + MIR SINE MIR 27 70 -138 1869 140 0 3 chr2 27878889 27879175 -225377408 - AluJb SINE Alu -9 303 19 1669 243 98 25 chr2 27879738 27879830 -225376753 + MLT1J LTR MaLR 3 87 -424 1994 146 0 0 chr2 27879830 27880131 -225376452 + AluSx SINE Alu 1 301 -11 1669 243 98 25 chr2 27880131 27880508 -225376075 + MLT1J LTR MaLR 87 506 -5 2108 100 7 3 chr2 27881283 27881573 -225375010 + AluSq SINE Alu 1 291 -22 841 102 0 88 chr2 27881672 27881819 -225374764 + AluSg/x SINE Alu 163 296 -16 603 185 39 23 chr2 27881951 27882081 -225374502 - FLAM_A SINE Alu -1 132 1 364 306 12 0 chr2 27882090 27882175 -225374408 - L1MC4 LINE L1 -1338 6704 6619 1849 127 7 3 chr2 27882175 27882459 -225374124 - AluJb SINE Alu -27 285 1 283 251 103 55 chr2 27882465 27882756 -225373827 - L1MEd LINE L1 -5214 905 601 2179 103 0 0 chr2 27882829 27883119 -225373464 - AluSc SINE Alu -19 290 1 2002 113 20 13 chr2 27885060 27885361 -225371222 + AluSq SINE Alu 8 310 -3 2076 116 3 16 chr2 27885369 27885680 -225370903 + AluSx SINE Alu 1 307 -5 916 251 25 77 chr2 27885861 27886041 -225370542 + HAL1b LINE L1 733 921 -427 2134 97 3 3 chr2 27886041 27886330 -225370253 - AluSc SINE Alu -20 289 1 916 251 25 77 chr2 27886330 27886361 -225370222 + HAL1b LINE L1 921 952 -396 1749 176 0 3 chr2 27886361 27886663 -225369920 + AluJb SINE Alu 1 301 -11 916 251 25 77 chr2 27886663 27886881 -225369702 + HAL1b LINE L1 952 1141 -207 189 74 0 0 chr2 27886881 27886908 -225369675 + (TTAG)n Simple_repeat Simple_repeat 2 28 0 726 93 75 0 chr2 27886909 27887016 -225369567 - AluJb SINE Alu -197 115 1 2267 82 3 0 chr2 27887113 27887418 -225369165 - AluY SINE Alu -5 306 1 2128 109 0 0 chr2 27887424 27887717 -225368866 - AluSc SINE Alu -15 294 2 747 183 8 15 chr2 27887721 27887852 -225368731 - FLAM_C SINE Alu -3 130 1 1532 176 44 10 chr2 27887861 27888157 -225368426 - AluSx SINE Alu -6 306 1 884 192 0 0 chr2 27888752 27888908 -225367675 - AluJo SINE Alu -37 275 120 721 281 32 56 chr2 27888999 27889347 -225367236 + L2 LINE L2 1426 1764 -1550 1613 191 3 7 chr2 27889347 27889645 -225366938 - AluJo SINE Alu -15 297 1 721 281 32 56 chr2 27889645 27889727 -225366856 + L2 LINE L2 1764 1846 -1468 1799 136 3 14 chr2 27940574 27940869 -225315714 + AluJb SINE Alu 1 292 -20 2060 129 3 3 chr2 27940875 27941185 -225315398 + AluSx SINE Alu 1 310 -2 30 0 0 0 chr2 27942305 27942335 -225314248 + AT_rich Low_complexity Low_complexity 1 30 0 2142 82 14 0 chr2 27942368 27942662 -225313921 - AluY SINE Alu -13 298 1 852 149 14 7 chr2 27942793 27942941 -225313642 - AluJb SINE Alu -26 286 138 1495 166 17 10 chr2 27942951 27943247 -225313336 - AluSx SINE Alu -14 298 1 21 0 0 0 chr2 27943250 27943271 -225313312 + AT_rich Low_complexity Low_complexity 1 21 0 337 241 48 0 chr2 27943570 27943653 -225312930 + MER88 LTR ERVL 79 165 -299 306 321 15 37 chr2 27943583 27943717 -225312866 - MER74B LTR ERVL -75 547 417 * 1544 176 7 0 chr2 27943722 27943995 -225312588 - AluSq SINE Alu -38 275 1 2179 70 7 3 chr2 27944006 27944290 -225312293 - AluSg SINE Alu -17 293 9 476 237 61 0 chr2 27944298 27944412 -225312171 - MER74B LTR ERVL -191 431 311 21 0 0 0 chr2 27944791 27944812 -225311771 + AT_rich Low_complexity Low_complexity 1 21 0 1946 123 0 7 chr2 27944834 27945135 -225311448 - AluY SINE Alu -12 299 1 2090 91 3 7 chr2 27945148 27945446 -225311137 - AluSx SINE Alu -15 297 1 358 173 62 37 chr2 27945447 27945528 -225311055 + MER74B LTR ERVL 91 173 -449 2132 111 0 3 chr2 27945528 27945825 -225310758 - AluSx SINE Alu -16 296 1 1742 96 56 8 chr2 27945972 27946223 -225310360 - AluSc SINE Alu -46 263 1 293 269 212 60 chr2 27946447 27947031 -225309552 - L2 LINE L2 -1298 2016 1344 280 316 199 15 chr2 27947068 27947410 -225309173 - L2 LINE L2 -2136 1178 774 1866 116 14 17 chr2 27947534 27947828 -225308755 - AluSg SINE Alu -17 293 1 1721 141 44 3 chr2 27948192 27948489 -225308094 - AluSx SINE Alu -3 309 1 2145 123 0 0 chr2 27948629 27948930 -225307653 - AluSq SINE Alu -12 301 1 618 71 0 0 chr2 27948941 27949025 -225307558 - L1PA6 LINE L1 -6 6148 6065 341 290 269 14 chr2 27949048 27949132 -225307451 - L1MC4 LINE L1 -31 8011 7950 2310 93 3 3 chr2 27949132 27949445 -225307138 - AluSp SINE Alu 0 313 1 341 290 269 14 chr2 27949445 27949639 -225306944 - L1MC4 LINE L1 -92 7950 7662 2124 113 7 7 chr2 27949986 27950296 -225306287 - AluSx SINE Alu -2 310 1 1585 163 13 49 chr2 27950301 27950459 -225306124 - AluJo SINE Alu -17 295 152 2121 106 0 7 chr2 27950459 27950761 -225305822 - AluSx SINE Alu -12 300 1 1585 163 13 49 chr2 27950761 27950908 -225305675 - AluJo SINE Alu -160 152 1 947 181 33 0 chr2 27951024 27951206 -225305377 - MER5A DNA MER1_type -1 188 1 1670 123 11 0 chr2 27951332 27951592 -225304991 - AluSx SINE Alu -11 301 39 1345 190 7 19 chr2 27951645 27951914 -225304669 - AluJb SINE Alu -46 266 1 1176 167 0 33 chr2 27951971 27952181 -225304402 + AluJo SINE Alu 87 289 -23 1884 104 22 22 chr2 27952369 27952647 -225303936 + AluSx SINE Alu 1 278 -34 480 339 152 37 chr2 27952662 27952984 -225303599 - L1MC4a LINE L1 -267 5854 5496 300 248 90 21 chr2 27952985 27953130 -225303453 - L1MC4a LINE L1 -2330 5478 5324 2292 61 10 0 chr2 27953131 27953425 -225303158 + AluSq SINE Alu 1 297 -16 272 119 85 68 chr2 27953666 27953725 -225302858 - MER113 DNA MER1_type? -3 518 459 301 221 63 0 chr2 27953848 27953943 -225302640 - MER113 DNA MER1_type? -410 111 11 2040 112 3 0 chr2 27955075 27955361 -225301222 - AluSx SINE Alu -25 287 1 2139 73 4 0 chr2 27955723 27956030 -225300553 - AluSx SINE Alu 0 313 6 26 30 0 0 chr2 27956035 27956068 -225300515 + AT_rich Low_complexity Low_complexity 1 33 0 1529 188 108 42 chr2 27956329 27956513 -225300070 - MLT1D LTR MaLR 0 505 335 2033 91 31 7 chr2 27956513 27956800 -225299783 - AluSx SINE Alu -18 294 1 1529 188 108 42 chr2 27956800 27956993 -225299590 - MLT1D LTR MaLR -170 335 103 1214 99 0 0 chr2 27957026 27957216 -225299367 + AluSg/x SINE Alu 120 309 0 1866 122 14 0 chr2 27957217 27957513 -225299070 + AluSx SINE Alu 1 300 -12 279 292 44 51 chr2 27957839 27957976 -225298607 + MER5A DNA MER1_type 25 160 -29 967 171 6 12 chr2 27958256 27958420 -225298163 + FRAM SINE Alu 4 166 0 244 185 108 31 chr2 27958422 27958487 -225298096 - L1MB8 LINE L1 -44 6134 6065 879 120 57 34 chr2 27958569 27958744 -225297839 + L1M2 LINE L1 5126 5304 -842 1278 154 0 9 chr2 27958744 27958958 -225297625 + AluSx SINE Alu 1 212 -100 563 59 0 0 chr2 27958958 27959026 -225297557 + AluSp SINE Alu 78 145 -168 2130 108 3 16 chr2 27959026 27959342 -225297241 + AluSq SINE Alu 1 312 -1 1554 120 34 48 chr2 27959349 27959640 -225296943 + L1M2 LINE L1 5324 5610 -702 225 188 9 9 chr2 27959905 27959977 -225296606 + G-rich Low_complexity Low_complexity 1 72 0 1969 73 22 0 chr2 27960108 27960422 -225296161 + AluY SINE Alu 1 320 0 343 242 184 81 chr2 27960429 27960560 -225296023 - L1MC5 LINE L1 -469 7492 7376 2108 105 0 20 chr2 27960560 27960866 -225295717 - AluSx SINE Alu -12 300 1 343 242 184 81 chr2 27960866 27960957 -225295626 - L1MC5 LINE L1 -585 7376 7247 449 204 90 95 chr2 27961034 27961149 -225295434 - L1MC5 LINE L1 -737 7224 7109 1927 97 3 20 chr2 27961149 27961449 -225295134 + AluSx SINE Alu 3 297 -15 449 204 90 95 chr2 27961449 27961544 -225295039 - L1MC5 LINE L1 -852 7109 7015 243 88 0 0 chr2 27961559 27961593 -225294990 + (T)n Simple_repeat Simple_repeat 1 34 0 10228 32 9 106 chr2 27961624 27963158 -225293425 - SVA Other Other 0 1386 1 185 261 22 0 chr2 27963291 27963337 -225293246 - L2 LINE L2 -577 2737 2691 1215 192 81 37 chr2 27963339 27963635 -225292948 + AluJb SINE Alu 1 308 0 568 286 29 55 chr2 27963687 27963960 -225292623 + L1MC4a LINE L1 5589 5854 -1954 769 193 0 0 chr2 27963961 27964096 -225292487 + AluJo SINE Alu 2 136 -176 2282 72 7 0 chr2 27964096 27964401 -225292182 + AluSg SINE Alu 1 307 -3 792 115 0 18 chr2 27964401 27964514 -225292069 - AluJo/FLAM SINE Alu -200 112 2 594 218 0 24 chr2 27965263 27965387 -225291196 + MIR SINE MIR 3 123 -139 499 251 38 66 chr2 27965414 27965506 -225291077 + MIR SINE MIR 79 165 -97 1841 116 65 0 chr2 27965506 27965782 -225290801 - AluSx SINE Alu -18 294 1 499 251 38 66 chr2 27965782 27965872 -225290711 + MIR SINE MIR 165 256 -6 1765 159 14 0 chr2 27965890 27966173 -225290410 - AluJb SINE Alu -25 287 1 205 260 80 0 chr2 27966197 27966247 -225290336 + L2 LINE L2 3205 3258 -14 2152 90 0 32 chr2 27967131 27967441 -225289142 - AluSp SINE Alu -12 301 2 2321 74 0 0 chr2 27967454 27967752 -225288831 - AluY SINE Alu -13 298 1 1002 154 0 3 chr2 27967961 27968114 -225288469 - AluJb SINE Alu -22 290 67 198 0 0 0 chr2 27968114 27968136 -225288447 + (TG)n Simple_repeat Simple_repeat 2 23 0 1002 154 0 3 chr2 27968136 27968171 -225288412 - AluJb SINE Alu -245 67 33 213 39 0 0 chr2 27968171 27968197 -225288386 + (TG)n Simple_repeat Simple_repeat 1 26 0 703 200 109 17 chr2 27968205 27968287 -225288296 - AluJo SINE Alu -109 203 130 414 0 0 0 chr2 27968287 27968333 -225288250 + (TG)n Simple_repeat Simple_repeat 2 47 0 703 200 109 17 chr2 27968333 27968425 -225288158 - AluJo SINE Alu -182 130 13 21 36 0 0 chr2 27968441 27968469 -225288114 + AT_rich Low_complexity Low_complexity 1 28 0 1546 150 95 11 chr2 27968471 27968745 -225287838 + AluJo SINE Alu 1 297 -5 945 110 103 0 chr2 27973366 27973511 -225283072 + MSTA LTR MaLR 268 427 -1 1288 169 4 13 chr2 27973616 27973853 -225282730 - AluJb SINE Alu -73 239 5 4794 113 70 40 chr2 27973856 27973976 -225282607 - L1MA2 LINE L1 -232 6072 5957 1949 118 7 0 chr2 27973976 27974278 -225282305 - AluSx SINE Alu 0 304 1 4794 113 70 40 chr2 27974278 27974853 -225281730 - L1MA2 LINE L1 -347 5957 5401 2275 92 0 19 chr2 27974853 27975169 -225281414 - AluSg SINE Alu 0 310 1 4794 113 70 40 chr2 27975169 27975236 -225281347 - L1MA2 LINE L1 -903 5401 5337 204 40 0 0 chr2 27975236 27975261 -225281322 + (TA)n Simple_repeat Simple_repeat 1 25 0 4794 113 70 40 chr2 27975261 27975567 -225281016 - L1MA2 LINE L1 -967 5337 4949 1861 149 129 18 chr2 27975567 27975940 -225280643 - MSTA LTR MaLR -14 414 1 3135 121 10 10 chr2 27975940 27976430 -225280153 - L1MA2 LINE L1 -1212 4934 4442 1947 103 0 67 chr2 27976430 27976742 -225279841 + AluSg SINE Alu 4 294 -16 1131 149 0 0 chr2 27976742 27976917 -225279666 - L1MA2 LINE L1 -1924 4222 4048 3186 182 39 42 chr2 27976924 27977745 -225278838 - L1MD3 LINE L1 0 7995 6990 937 159 6 23 chr2 27977765 27977941 -225278642 - AluJb SINE Alu -4 308 136 692 181 6 30 chr2 27977943 27978109 -225278474 - L1MC3 LINE L1 -827 6958 6797 1655 174 3 10 chr2 27978442 27978741 -225277842 + AluJo SINE Alu 1 297 -15 279 0 0 0 chr2 27978846 27978877 -225277706 + (TG)n Simple_repeat Simple_repeat 2 32 0 682 171 0 0 chr2 27978931 27979042 -225277541 - FLAM_A SINE Alu -4 138 28 2154 90 3 13 chr2 27981480 27981781 -225274802 + AluSx SINE Alu 1 298 -14 268 273 0 0 chr2 27981999 27982065 -225274518 + L2 LINE L2 3242 3307 -6 434 101 81 111 chr2 27982626 27982655 -225273928 - Charlie5 DNA MER1_type 0 2624 2596 1883 143 3 19 chr2 27982655 27982969 -225273614 + AluJo SINE Alu 1 309 -3 434 101 81 111 chr2 27982969 27983038 -225273545 - Charlie5 DNA MER1_type -28 2596 2529 2098 98 0 36 chr2 27983038 27983345 -225273238 + AluSx SINE Alu 1 296 -16 565 120 0 0 chr2 27983361 27983436 -225273147 - AluS SINE Alu -235 76 2 498 146 85 61 chr2 27983437 27983602 -225272981 - Charlie5 DNA MER1_type -77 2535 2367 1810 134 10 26 chr2 27983730 27984043 -225272540 - AluSx SINE Alu -4 308 1 914 130 147 6 chr2 27984070 27984247 -225272336 - Charlie5 DNA MER1_type -2410 202 1 626 172 144 58 chr2 27984633 27984807 -225271776 + MER53 DNA DNA 1 189 0 1227 274 120 58 chr2 27984815 27985194 -225271389 + MLT1K LTR MaLR 3 428 -160 2014 121 3 3 chr2 27985194 27985492 -225271091 + AluSx SINE Alu 1 298 -14 1227 274 120 58 chr2 27985492 27985662 -225270921 + MLT1K LTR MaLR 428 586 -2 279 213 0 0 chr2 27986157 27986204 -225270379 + MER94 DNA DNA 72 118 -16 234 301 71 35 chr2 27986337 27986450 -225270133 + L2 LINE L2 3187 3303 -10 1929 142 0 0 chr2 27986450 27986746 -225269837 + AluSx SINE Alu 1 296 -16 372 298 57 32 chr2 27986759 27986917 -225269666 - MIR SINE MIR -65 197 36 2305 106 19 37 chr2 27987152 27987528 -225269055 + THE1C LTR MaLR 1 369 -6 1821 102 0 4 chr2 27987528 27987782 -225268801 + AluSc SINE Alu 45 297 -12 541 306 37 41 chr2 27988127 27988201 -225268382 + L1MC4a LINE L1 4630 4703 -1443 2170 118 0 13 chr2 27988201 27988515 -225268068 + AluSx SINE Alu 1 310 -2 541 306 37 41 chr2 27988515 27988720 -225267863 + L1MC4a LINE L1 4703 4907 -1239 1720 152 0 42 chr2 27988720 27989030 -225267553 + AluJo SINE Alu 1 297 -15 189 0 0 0 chr2 27989030 27989051 -225267532 + (TA)n Simple_repeat Simple_repeat 1 21 0 541 306 37 41 chr2 27989051 27989233 -225267350 + L1MC4a LINE L1 4905 5091 -1055 1530 165 14 14 chr2 27989233 27989518 -225267065 + AluJb SINE Alu 13 297 -15 2074 106 7 0 chr2 27989521 27989839 -225266744 + AluSx SINE Alu 1 320 0 1789 229 113 11 chr2 27989841 27990408 -225266175 + L1MC4a LINE L1 5420 6044 -1764 210 204 0 20 chr2 27990481 27990530 -225266053 + (TA)n Simple_repeat Simple_repeat 2 49 0 1008 225 38 45 chr2 27990530 27990797 -225265786 + L1MC4 LINE L1 6614 6878 -1164 351 0 0 0 chr2 27990848 27990887 -225265696 + (CA)n Simple_repeat Simple_repeat 2 40 0 349 246 110 8 chr2 27990888 27991006 -225265577 + L1MC4 LINE L1 5802 5931 -1877 2859 202 125 45 chr2 27991040 27991242 -225265341 + L1MC4 LINE L1 6907 7091 -951 2050 125 10 0 chr2 27991242 27991546 -225265037 - AluSx SINE Alu -3 309 3 2859 202 125 45 chr2 27991546 27992215 -225264368 + L1MC4 LINE L1 7091 7848 -194 2257 103 3 0 chr2 27992243 27992543 -225264040 - AluSx SINE Alu -11 301 1 210 211 14 42 chr2 27996465 27996536 -225260047 + G-rich Low_complexity Low_complexity 3 71 0 2456 59 3 10 chr2 27996953 27997258 -225259325 + AluY SINE Alu 1 303 -8 2242 94 31 0 chr2 27997268 27997556 -225259027 + AluSx SINE Alu 1 297 -15 2002 159 3 0 chr2 27998051 27998346 -225258237 + AluJb SINE Alu 11 306 -6 2543 57 7 0 chr2 27998569 27998868 -225257715 + AluY SINE Alu 1 301 -10 215 286 0 48 chr2 27999016 27999079 -225257504 - L2 LINE L2 -22 3250 3191 2197 124 16 0 chr2 27999364 27999671 -225256912 - AluSx SINE Alu 0 312 1 202 259 0 0 chr2 28001873 28001927 -225254656 + (CCCCG)n Simple_repeat Simple_repeat 2 55 0 2350 77 13 3 chr2 28002954 28003253 -225253330 + AluSx SINE Alu 1 302 -10 2367 98 0 3 chr2 28004008 28004304 -225252279 - AluSx SINE Alu -15 297 3 1974 115 0 77 chr2 28005856 28006038 -225250545 - AluSx SINE Alu -10 302 154 2992 13 0 0 chr2 28006038 28006356 -225250227 - AluYb8 SINE Alu 0 318 1 1974 115 0 77 chr2 28006356 28006496 -225250087 - AluSx SINE Alu -158 154 5 196 244 0 0 chr2 28006502 28006543 -225250040 + L3b LINE CR1 1534 1574 -9 2497 80 0 10 chr2 28007442 28007756 -225248827 - AluY SINE Alu 0 311 1 849 107 43 130 chr2 28009862 28009949 -225246634 + Charlie5 DNA MER1_type 2355 2448 -137 2173 128 0 3 chr2 28009949 28010247 -225246336 - AluSx SINE Alu -13 299 3 849 107 43 130 chr2 28010247 28010412 -225246171 + Charlie5 DNA MER1_type 2448 2585 0 2290 73 0 11 chr2 28010839 28011163 -225245420 + AluY SINE Alu 1 321 0 25 0 0 0 chr2 28011300 28011325 -225245258 + AT_rich Low_complexity Low_complexity 1 25 0 234 150 0 0 chr2 28011325 28011365 -225245218 + (TA)n Simple_repeat Simple_repeat 1 40 0 1393 210 80 70 chr2 28011365 28011832 -225244751 + MLT2B1 LTR ERVL 1 475 -45 1303 197 41 90 chr2 28011832 28012198 -225244385 - MER7A DNA MER2_type 0 346 1 1393 210 80 70 chr2 28012198 28012215 -225244368 + MLT2B1 LTR ERVL 475 490 -30 2455 72 0 10 chr2 28014781 28015087 -225241496 + AluY SINE Alu 2 304 -7 2392 83 3 0 chr2 28015285 28015574 -225241009 + AluSc SINE Alu 1 290 -19 2355 115 0 0 chr2 28016116 28016420 -225240163 + AluSx SINE Alu 1 304 -8 2040 133 3 20 chr2 28016641 28016942 -225239641 + AluJb SINE Alu 1 296 -16 8455 54 2 0 chr2 28019328 28020295 -225236288 + LTR5 LTR ERVK 1 969 0 601 147 161 14 chr2 28021318 28021387 -225235196 + MER69A DNA AcHobo 13 71 -2455 2106 112 3 7 chr2 28021387 28021681 -225234902 - AluSx SINE Alu -19 293 1 601 147 161 14 chr2 28021681 28021754 -225234829 + MER69A DNA AcHobo 71 176 -1 1141 300 109 20 chr2 28022584 28022775 -225233808 - L2 LINE L2 0 3313 3140 1405 59 99 63 chr2 28022775 28022997 -225233586 - MER30 DNA MER1_type 0 230 1 1141 300 109 20 chr2 28022997 28023585 -225232998 - L2 LINE L2 -173 3140 2451 521 311 52 52 chr2 28023603 28023851 -225232732 - MIR SINE MIR -11 251 4 1871 165 13 0 chr2 28023961 28024264 -225232319 - AluSx SINE Alu -5 307 1 2335 94 3 10 chr2 28024381 28024690 -225231893 - AluSx SINE Alu -5 307 1 2209 95 3 30 chr2 28025722 28026027 -225230556 - AluSx SINE Alu -14 298 2 974 185 10 36 chr2 28027436 28027690 -225228893 - AluJo SINE Alu 0 371 123 2231 115 7 0 chr2 28027930 28028226 -225228357 - AluSx SINE Alu -14 298 1 638 317 93 45 chr2 28028236 28028357 -225228226 - L1MEc LINE L1 -4563 1833 1719 2249 127 3 0 chr2 28028357 28028664 -225227919 - AluSx SINE Alu -4 308 1 638 317 93 45 chr2 28028664 28028895 -225227688 - L1MEc LINE L1 -4677 1719 1464 2456 84 6 6 chr2 28028897 28029208 -225227375 - AluY SINE Alu 0 311 1 3686 78 99 5 chr2 28029208 28029776 -225226807 - L1MA2 LINE L1 -356 5948 5328 2452 89 0 19 chr2 28029784 28030100 -225226483 - AluSg SINE Alu 0 310 1 447 270 50 117 chr2 28031370 28031610 -225224973 + L1MEd LINE L1 563 817 -5302 1765 153 14 14 chr2 28031610 28031891 -225224692 + AluJo SINE Alu 1 281 -31 447 270 50 117 chr2 28031891 28032171 -225224412 + L1MEd LINE L1 817 1028 -5091 1756 131 0 117 chr2 28032171 28032523 -225224060 + AluJo SINE Alu 1 311 -1 447 270 50 117 chr2 28032523 28032694 -225223889 + L1MEd LINE L1 1028 1209 -4910 2043 132 3 3 chr2 28032769 28033058 -225223525 + AluSg SINE Alu 1 289 -21 1778 159 33 10 chr2 28033069 28033371 -225223212 + AluJo SINE Alu 1 309 -3 327 153 0 42 chr2 28033419 28033491 -225223092 + AluJo SINE Alu 68 136 -166 2373 106 0 0 chr2 28033797 28034099 -225222484 + AluSx SINE Alu 1 302 -10 391 289 0 11 chr2 28034410 28034500 -225222083 - L2 LINE L2 0 3313 3225 2030 97 3 31 chr2 28034626 28034916 -225221667 - AluSg SINE Alu -17 293 12 1826 146 36 7 chr2 28035186 28035488 -225221095 + AluSx SINE Alu 1 311 -1 423 118 15 15 chr2 28035780 28035848 -225220735 + FLAM_A SINE Alu 1 68 -64 195 42 0 0 chr2 28036884 28036908 -225219675 + (CCCCCG)n Simple_repeat Simple_repeat 4 27 0 2334 84 10 0 chr2 28037388 28037685 -225218898 + AluY SINE Alu 1 300 -11 911 177 7 0 chr2 28037696 28037837 -225218746 + AluJb SINE Alu 132 273 -39 459 306 64 61 chr2 28038158 28038393 -225218190 + L1ME4a LINE L1 5256 5495 -2313 2091 103 0 35 chr2 28038393 28038722 -225217861 + AluSc SINE Alu 1 319 0 459 306 64 61 chr2 28038722 28038845 -225217738 + L1ME4a LINE L1 5495 5616 -2192 24 0 0 0 chr2 28038845 28038869 -225217714 + AT_rich Low_complexity Low_complexity 1 24 0 718 267 43 12 chr2 28039284 28039542 -225217041 + L1ME LINE L1 5558 5823 -298 2450 64 3 3 chr2 28039548 28039843 -225216740 + AluY SINE Alu 1 295 -16 457 254 112 76 chr2 28039854 28040157 -225216426 + L1ME4a LINE L1 5785 6098 -23 1746 190 0 7 chr2 28040214 28040519 -225216064 + AluJb SINE Alu 1 303 -9 249 275 132 33 chr2 28040733 28040824 -225215759 - MIR SINE MIR -75 133 34 2120 118 28 0 chr2 28041043 28041330 -225215253 + AluSx SINE Alu 1 295 -17 307 341 64 52 chr2 28042221 28042394 -225214189 - MIR3 SINE MIR -9 199 25 2335 56 0 28 chr2 28044421 28044708 -225211875 - AluY SINE Alu 0 311 33 2376 100 3 0 chr2 28044708 28045008 -225211575 - AluSx SINE Alu -8 304 3 2191 104 35 0 chr2 28045207 28045496 -225211087 + AluSq SINE Alu 1 299 -14 563 269 0 65 chr2 28047293 28047479 -225209104 - MER5B DNA MER1_type -4 174 1 196 323 89 76 chr2 28047671 28047829 -225208754 - L3 LINE CR1 -11 1566 1407 346 304 22 54 chr2 28047842 28048026 -225208557 + MER5B DNA MER1_type 1 178 0 374 259 21 124 chr2 28048768 28048961 -225207622 + MER5A DNA MER1_type 17 189 0 183 345 17 0 chr2 28049061 28049119 -225207464 - L3b LINE CR1 -1 1582 1524 579 156 11 0 chr2 28049150 28049240 -225207343 - MER5A DNA MER1_type -90 99 9 820 164 48 0 chr2 28049267 28049413 -225207170 - MER58B DNA MER1_type -15 326 174 750 129 0 0 chr2 28049418 28049519 -225207064 + AluSx SINE Alu 2 102 -211 1185 120 24 29 chr2 28049568 28049777 -225206806 + AluSx SINE Alu 104 311 -1 2130 114 0 13 chr2 28049793 28050108 -225206475 + AluSx SINE Alu 1 311 -1 334 179 26 171 chr2 28050871 28050988 -225205595 - MER102a DNA MER1_type -10 320 221 274 328 24 40 chr2 28051894 28052019 -225204564 + MIR SINE MIR 71 193 -69 380 255 147 13 chr2 28053574 28053805 -225202778 - MIR SINE MIR 0 262 1 371 263 140 9 chr2 28053911 28054025 -225202558 - MIR SINE MIR -70 192 64 21 0 0 0 chr2 28054054 28054075 -225202508 + AT_rich Low_complexity Low_complexity 1 21 0 392 250 0 0 chr2 28054126 28054202 -225202381 + L2 LINE L2 3196 3271 -1 26 82 0 0 chr2 28054812 28054873 -225201710 + GC_rich Low_complexity Low_complexity 1 61 0 2221 77 3 14 chr2 28056543 28056840 -225199743 + AluSx SINE Alu 10 303 -9 2252 89 3 0 chr2 28058992 28059294 -225197289 + AluSp SINE Alu 1 303 -10 507 268 93 58 chr2 28059512 28059717 -225196866 + MIR SINE MIR 32 243 -19 34 0 0 0 chr2 28059911 28059945 -225196638 + AT_rich Low_complexity Low_complexity 1 34 0 587 282 70 75 chr2 28059945 28060117 -225196466 + L1ME3A LINE L1 2059 2230 -4196 1211 184 23 5 chr2 28060117 28060334 -225196249 - MER58A DNA MER1_type -3 221 1 587 282 70 75 chr2 28060334 28060445 -225196138 + L1ME3A LINE L1 2230 2340 -4086 2020 120 7 0 chr2 28060445 28060737 -225195846 + AluSx SINE Alu 11 304 -8 587 282 70 75 chr2 28060737 28060853 -225195730 + L1ME3A LINE L1 2340 2457 -3969 256 157 14 29 chr2 28060931 28061001 -225195582 + L1ME3A LINE L1 2534 2602 -3824 2707 153 22 24 chr2 28061015 28061473 -225195110 - LTR32 LTR ERVL 0 471 15 516 95 14 14 chr2 28061453 28061527 -225195056 - LTR32 LTR ERVL -383 88 15 * 1961 256 124 19 chr2 28061527 28062534 -225194049 + L1ME3A LINE L1 2612 3724 -2702 594 204 0 9 chr2 28062555 28062663 -225193920 + FLAM_A SINE Alu 12 118 -24 737 285 29 36 chr2 28062715 28062967 -225193616 + L1ME3A LINE L1 3753 4004 -2422 2089 119 0 0 chr2 28062967 28063260 -225193323 + AluJb SINE Alu 1 293 -19 737 285 29 36 chr2 28063260 28063316 -225193267 + L1ME3A LINE L1 4004 4059 -2367 1003 249 29 21 chr2 28063320 28063601 -225192982 + L1ME3A LINE L1 5647 5929 -513 1005 177 22 11 chr2 28063614 28063795 -225192788 + MER5A DNA MER1_type 7 189 0 604 258 72 19 chr2 28063799 28064063 -225192520 + L1ME3A LINE L1 5933 6210 -240 22 0 0 0 chr2 28064076 28064098 -225192485 + AT_rich Low_complexity Low_complexity 1 22 0 196 298 113 26 chr2 28064098 28064249 -225192334 + L2 LINE L2 2203 2366 -948 2219 82 3 0 chr2 28064800 28065091 -225191492 + AluSc SINE Alu 1 292 -17 626 232 148 7 chr2 28066347 28066502 -225190081 - MER5A DNA MER1_type -6 183 7 2160 106 3 0 chr2 28066629 28066932 -225189651 + AluSx SINE Alu 1 304 -8 208 325 63 32 chr2 28066937 28067063 -225189520 - L2 LINE L2 -4 3309 3180 6581 68 15 19 chr2 28067186 28068794 -225187789 - SVA Other Other -683 1386 57 216 0 0 0 chr2 28068794 28068818 -225187765 + (GGGAGA)n Simple_repeat Simple_repeat 5 28 0 189 0 0 0 chr2 28068918 28068939 -225187644 + (A)n Simple_repeat Simple_repeat 1 21 0 407 258 118 105 chr2 28068965 28069075 -225187508 - L1M4c LINE L1 -4952 1432 1325 536 103 23 11 chr2 28069075 28069162 -225187421 - L1MC1 LINE L1 0 6333 6246 407 258 118 105 chr2 28069162 28069431 -225187152 - L1M4c LINE L1 -5059 1325 1048 24 0 0 0 chr2 28069470 28069494 -225187089 + AT_rich Low_complexity Low_complexity 1 24 0 6216 67 8 68 chr2 28069494 28070502 -225186081 - SVA Other Other -6 1380 433 1239 66 40 13 chr2 28070519 28070745 -225185838 - SVA Other Other -520 866 635 5177 77 28 62 chr2 28070771 28071668 -225184915 - SVA Other Other -520 866 1 407 253 0 0 chr2 28071700 28071779 -225184804 + L2 LINE L2 3193 3271 -1 778 179 39 62 chr2 28071962 28072009 -225184574 - MER3 DNA MER1_type 0 209 162 1620 156 28 10 chr2 28072009 28072298 -225184285 - AluJo SINE Alu -18 294 1 778 179 39 62 chr2 28072298 28072340 -225184243 - MER3 DNA MER1_type -47 162 121 2262 97 7 0 chr2 28072340 28072648 -225183935 + AluSx SINE Alu 1 310 -2 778 179 39 62 chr2 28072648 28072736 -225183847 - MER3 DNA MER1_type -88 121 35 1442 106 75 78 chr2 28073041 28073334 -225183249 + AluSx SINE Alu 3 294 -18 24 67 0 0 chr2 28073526 28073571 -225183012 + AT_rich Low_complexity Low_complexity 1 45 0 1394 203 22 22 chr2 28074426 28074747 -225181836 - L1ME2 LINE L1 -1 6399 6079 2003 126 0 41 chr2 28074754 28075072 -225181511 - AluSx SINE Alu -7 305 1 2116 128 0 0 chr2 28075250 28075547 -225181036 - AluSx SINE Alu -15 297 1 1406 214 52 30 chr2 28075651 28075792 -225180791 - L1ME2 LINE L1 -524 5876 5740 1698 157 44 0 chr2 28075792 28076085 -225180498 - AluSx SINE Alu -4 308 3 1406 214 52 30 chr2 28076085 28076656 -225179927 - L1ME2 LINE L1 -660 5740 5153 743 170 6 29 chr2 28076657 28076755 -225179828 - MER96B DNA MER1_type? -1 416 322 1670 199 3 0 chr2 28076755 28077056 -225179527 - AluJb SINE Alu -10 302 1 743 170 6 29 chr2 28077056 28077128 -225179455 - MER96B DNA MER1_type? -95 322 250 1476 252 43 19 chr2 28077187 28077402 -225179181 - L1ME2 LINE L1 -1225 5157 4949 2090 118 7 3 chr2 28077402 28077699 -225178884 - AluSx SINE Alu -14 298 1 1476 252 43 19 chr2 28077699 28077944 -225178639 - L1ME2 LINE L1 -1433 4949 4686 544 176 47 87 chr2 28077973 28078200 -225178383 - L1MC5 LINE L1 -30 7931 7662 2208 72 41 0 chr2 28078200 28078491 -225178092 - AluY SINE Alu -6 305 3 544 176 47 87 chr2 28078491 28078549 -225178034 - L1MC5 LINE L1 -299 7662 7603 532 156 0 0 chr2 28078552 28078629 -225177954 + AluJ/FLAM SINE Alu 3 79 -233 1366 173 0 50 chr2 28078729 28078836 -225177747 + AluJb SINE Alu 27 138 -174 2205 81 10 0 chr2 28078836 28079133 -225177450 + AluY SINE Alu 1 300 -11 1366 173 0 50 chr2 28079133 28079285 -225177298 + AluJb SINE Alu 138 273 -39 356 306 0 12 chr2 28079618 28079788 -225176795 + L1MC/D LINE L1 5266 5433 -2352 2096 79 4 0 chr2 28080054 28080365 -225176218 - AluY SINE Alu 0 312 1 894 148 7 7 chr2 28080496 28080645 -225175938 - AluJb SINE Alu -26 286 138 1831 135 10 7 chr2 28080655 28080952 -225175631 - AluSx SINE Alu -14 298 1 21 0 0 0 chr2 28080955 28080976 -225175607 + AT_rich Low_complexity Low_complexity 1 21 0 334 115 0 19 chr2 28081402 28081454 -225175129 - MLT1A2 LTR MaLR -323 51 1 696 241 5 9 chr2 28081454 28081666 -225174917 - L1ME2 LINE L1 -2139 4243 4033 311 197 0 16 chr2 28081659 28081720 -225174863 + L1 LINE L1 4092 4151 -1995 * 312 226 3 57 chr2 28081724 28081811 -225174772 - L1ME2 LINE L1 -4649 1733 1664 1466 180 0 8 chr2 28081811 28082067 -225174516 + AluJo SINE Alu 1 254 -58 312 226 3 57 chr2 28082067 28082085 -225174498 - L1ME2 LINE L1 -4718 1664 1647 251 301 49 7 chr2 28082117 28082260 -225174323 - L1ME2 LINE L1 -4769 1615 1467 1985 105 3 14 chr2 28082273 28082569 -225174014 + AluSc SINE Alu 1 293 -16 741 152 37 30 chr2 28082719 28082883 -225173700 + L1MA7 LINE L1 6115 6279 -12 1434 181 61 4 chr2 28082888 28083165 -225173418 - AluSx SINE Alu -19 293 1 290 282 96 91 chr2 28083310 28083469 -225173114 + L1MEd LINE L1 758 920 -5496 2420 50 0 3 chr2 28083469 28083766 -225172817 + AluY SINE Alu 1 296 -15 290 282 96 91 chr2 28083766 28083815 -225172768 + L1MEd LINE L1 920 967 -5449 462 248 48 0 chr2 28083816 28083961 -225172622 - MER104 DNA Tc2 -1 179 28 372 264 46 128 chr2 28083962 28084062 -225172521 + L1MEd LINE L1 863 970 -5456 2292 94 0 3 chr2 28084062 28084370 -225172213 + AluSc SINE Alu 2 308 -1 372 264 46 128 chr2 28084370 28084637 -225171946 + L1MEd LINE L1 970 1200 -5226 316 313 42 42 chr2 28084671 28084815 -225171768 + L1ME LINE L1 46 189 -5881 1066 266 31 65 chr2 28085337 28085700 -225170883 - L1 LINE L1 -1871 4275 3901 2047 134 0 0 chr2 28085700 28086007 -225170576 - AluSx SINE Alu -5 307 1 1066 266 31 65 chr2 28086007 28086167 -225170416 - L1 LINE L1 -2245 3901 3786 2041 132 3 3 chr2 28086167 28086477 -225170106 - AluSx SINE Alu -1 311 2 1066 266 31 65 chr2 28086477 28086653 -225169930 - L1 LINE L1 -2360 3786 3606 2043 136 74 47 chr2 28086781 28087116 -225169467 - MLT2C2 LTR ERVL -48 416 67 2030 98 39 0 chr2 28087116 28087402 -225169181 - AluSc SINE Alu -12 297 1 2043 136 74 47 chr2 28087402 28087471 -225169112 - MLT2C2 LTR ERVL -397 67 1 3398 179 29 8 chr2 28087472 28088308 -225168275 - L1M4 LINE L1 -1091 5055 4107 311 212 0 15 chr2 28088491 28088557 -225168026 - MLT-int LTR MaLR -992 743 679 2141 112 0 3 chr2 28090724 28091020 -225165563 - AluSx SINE Alu -17 295 1 663 161 207 42 chr2 28091020 28091213 -225165370 - MLT1D LTR MaLR -178 327 103 1214 99 0 0 chr2 28091246 28091436 -225165147 + AluSg/x SINE Alu 120 309 0 1911 121 10 0 chr2 28091437 28091734 -225164849 + AluSx SINE Alu 1 300 -12 279 292 44 51 chr2 28092061 28092198 -225164385 + MER5A DNA MER1_type 25 160 -29 967 171 6 12 chr2 28092478 28092642 -225163941 + FRAM SINE Alu 4 166 0 244 185 108 31 chr2 28092644 28092709 -225163874 - L1MB8 LINE L1 -44 6134 6065 897 121 63 35 chr2 28092791 28092965 -225163618 + L1 LINE L1 5126 5304 -842 1278 154 0 9 chr2 28092965 28093179 -225163404 + AluSx SINE Alu 1 212 -100 563 59 0 0 chr2 28093179 28093247 -225163336 + AluSp SINE Alu 78 145 -168 2106 109 3 16 chr2 28093247 28093560 -225163023 + AluSq SINE Alu 1 309 -4 425 73 0 0 chr2 28093567 28093622 -225162961 + L1M LINE L1 5324 5378 -913 303 245 61 150 chr2 28094294 28094343 -225162240 + MIR3 SINE MIR 64 116 -92 2073 73 11 0 chr2 28094343 28094615 -225161968 - AluSq SINE Alu -23 290 16 303 245 61 150 chr2 28094615 28094712 -225161871 + MIR3 SINE MIR 116 197 -11 2178 95 3 0 chr2 28095816 28096110 -225160473 - AluSq SINE Alu -18 295 1 1988 97 0 0 chr2 28097638 28097885 -225158698 - AluY SINE Alu -64 247 1 25 105 0 0 chr2 28103056 28103151 -225153432 + GC_rich Low_complexity Low_complexity 1 95 0 200 219 82 41 chr2 28105162 28105235 -225151348 + MIR SINE MIR 30 105 -103 2437 77 0 46 chr2 28105243 28105570 -225151013 - AluSq SINE Alu 0 313 2 277 349 0 0 chr2 28106368 28106494 -225150089 + CT-rich Low_complexity Low_complexity 2 127 0 2007 104 61 11 chr2 28108993 28109272 -225147311 - AluSg SINE Alu -17 293 1 30 0 0 0 chr2 28109272 28109302 -225147281 + AT_rich Low_complexity Low_complexity 1 30 0 286 283 22 11 chr2 28109709 28109801 -225146782 + GA-rich Low_complexity Low_complexity 3 95 0 2167 123 0 41 chr2 28109931 28110247 -225146336 - AluSx SINE Alu -9 303 1 2273 128 0 0 chr2 28110425 28110722 -225145861 - AluSx SINE Alu -15 297 1 538 214 132 0 chr2 28110825 28110984 -225145599 - L1ME LINE L1 -524 5640 5461 1945 147 3 10 chr2 28111341 28111634 -225144949 + AluSg SINE Alu 1 291 -19 2369 84 7 0 chr2 28111634 28111956 -225144627 + AluSg SINE Alu 1 310 0 407 253 147 13 chr2 28112022 28112116 -225144467 + L1ME4a LINE L1 5878 5958 -163 2317 101 0 3 chr2 28112116 28112412 -225144171 + AluY SINE Alu 1 295 -16 407 253 147 13 chr2 28112412 28112467 -225144116 + L1ME4a LINE L1 5958 6047 -74 190 260 60 0 chr2 28112832 28112882 -225143701 - MIR SINE MIR -6 256 204 2236 109 0 0 chr2 28112940 28113248 -225143335 - AluSq SINE Alu 0 308 1 210 71 0 0 chr2 28113417 28113445 -225143138 + (TA)n Simple_repeat Simple_repeat 2 29 0 2038 130 27 10 chr2 28113445 28113745 -225142838 - AluSx SINE Alu -7 305 1 251 330 58 48 chr2 28114088 28114294 -225142289 + MIR SINE MIR 53 260 -2 36 53 0 0 chr2 28115153 28115210 -225141373 + GC_rich Low_complexity Low_complexity 1 57 0 440 132 0 0 chr2 28116232 28116300 -225140283 - FLAM_A SINE Alu -64 68 1 1811 148 36 7 chr2 28116592 28116895 -225139688 - AluSx SINE Alu 0 312 1 1795 168 0 30 chr2 28117154 28117457 -225139126 + AluY SINE Alu 1 294 -17 370 289 0 11 chr2 28117583 28117673 -225138910 + L2 LINE L2 3225 3313 0 2406 103 0 0 chr2 28117984 28118286 -225138297 - AluSx SINE Alu -10 302 1 333 153 0 42 chr2 28118592 28118664 -225137919 - AluJo SINE Alu -166 136 68 1782 159 33 10 chr2 28118712 28119014 -225137569 - AluJo SINE Alu -3 309 1 2292 103 3 3 chr2 28119025 28119316 -225137267 - AluSx SINE Alu -21 291 1 210 211 14 42 chr2 28123240 28123311 -225133272 + G-rich Low_complexity Low_complexity 3 71 0 2548 59 0 7 chr2 28123728 28124033 -225132550 + AluY SINE Alu 1 303 -8 2276 90 31 0 chr2 28124043 28124332 -225132251 + AluSx SINE Alu 1 298 -14 1720 196 3 0 chr2 28124827 28125118 -225131465 + AluJb SINE Alu 11 302 -10 2547 57 7 0 chr2 28125345 28125643 -225130940 + AluY SINE Alu 1 300 -11 195 286 0 48 chr2 28125791 28125854 -225130729 - L2 LINE L2 -22 3250 3191 2190 129 10 0 chr2 28126131 28126434 -225130149 - AluSx SINE Alu -6 306 1 236 250 36 0 chr2 28128415 28128499 -225128084 + G-rich Low_complexity Low_complexity 2 88 0 202 259 0 0 chr2 28128640 28128694 -225127889 + (CCCCG)n Simple_repeat Simple_repeat 2 55 0 2363 77 13 3 chr2 28129722 28130021 -225126562 + AluSx SINE Alu 1 302 -10 2389 100 0 3 chr2 28130776 28131076 -225125507 - AluSx SINE Alu -11 301 3 1993 114 0 77 chr2 28132627 28132810 -225123773 - AluSx SINE Alu -9 303 154 2823 13 0 31 chr2 28132810 28133127 -225123456 - AluYb8 SINE Alu -11 307 1 1993 114 0 77 chr2 28133127 28133267 -225123316 - AluSx SINE Alu -158 154 5 186 244 0 0 chr2 28133273 28133314 -225123269 + L3b LINE CR1 1534 1574 -9 2491 83 0 10 chr2 28134213 28134527 -225122056 - AluY SINE Alu 0 311 1 785 114 43 137 chr2 28136633 28136720 -225119863 + Charlie5 DNA MER1_type 2355 2449 -136 2178 128 0 3 chr2 28136720 28137018 -225119565 - AluSx SINE Alu -13 299 3 785 114 43 137 chr2 28137018 28137185 -225119398 + Charlie5 DNA MER1_type 2449 2585 0 2307 73 0 11 chr2 28137612 28137936 -225118647 + AluY SINE Alu 1 321 0 34 0 0 0 chr2 28138073 28138107 -225118476 + AT_rich Low_complexity Low_complexity 1 34 0 1457 230 85 41 chr2 28138135 28138595 -225117988 + MLT2B1 LTR ERVL 1 480 -40 1216 165 55 21 chr2 28138602 28138838 -225117745 - Tigger3(Golem) DNA MER2_type 0 3029 2786 429 164 0 0 chr2 28138854 28138921 -225117662 - AluS SINE Alu -242 71 5 278 217 0 0 chr2 28138925 28138971 -225117612 - Tigger3(Golem) DNA MER2_type -2983 46 1 2486 69 0 10 chr2 28141555 28141861 -225114722 + AluY SINE Alu 2 304 -7 2402 83 3 0 chr2 28142059 28142348 -225114235 + AluSc SINE Alu 1 290 -19 2357 115 0 0 chr2 28142890 28143194 -225113389 + AluSx SINE Alu 1 304 -8 2046 133 3 20 chr2 28143415 28143716 -225112867 + AluJb SINE Alu 1 296 -16 8552 52 1 0 chr2 28146106 28147074 -225109509 + LTR5 LTR ERVK 1 969 0 607 154 168 21 chr2 28148097 28148166 -225108417 + MER69A DNA AcHobo 13 71 -2455 2103 116 3 7 chr2 28148166 28148460 -225108123 - AluSx SINE Alu -19 293 1 607 154 168 21 chr2 28148460 28148533 -225108050 + MER69A DNA AcHobo 71 176 -1 1152 299 109 20 chr2 28149363 28149554 -225107029 - L2 LINE L2 0 3313 3140 1412 59 99 59 chr2 28149554 28149775 -225106808 - MER30 DNA MER1_type 0 230 1 1152 299 109 20 chr2 28149775 28150363 -225106220 - L2 LINE L2 -173 3140 2451 526 311 52 52 chr2 28150381 28150629 -225105954 - MIR SINE MIR -11 251 4 1813 164 7 0 chr2 28150739 28151044 -225105539 - AluSx SINE Alu -5 307 1 2293 88 0 0 chr2 28151052 28151347 -225105236 - AluSg SINE Alu -15 295 1 640 264 51 116 chr2 28152617 28152857 -225103726 + L1MEd LINE L1 563 817 -5302 1646 149 14 14 chr2 28152857 28153138 -225103445 + AluJo SINE Alu 1 281 -31 640 264 51 116 chr2 28153138 28153418 -225103165 + L1MEd LINE L1 817 1023 -5096 1664 124 0 104 chr2 28153418 28153765 -225102818 + AluJo SINE Alu 1 311 -1 640 264 51 116 chr2 28153765 28153986 -225102597 + L1MEd LINE L1 1023 1257 -4862 1829 137 0 0 chr2 28154002 28154272 -225102311 + AluY SINE Alu 1 270 -41 2348 70 0 0 chr2 28154544 28154843 -225101740 + AluY SINE Alu 1 299 -12 249 314 94 57 chr2 28155003 28155162 -225101421 + MIR SINE MIR 48 212 -50 216 200 0 0 chr2 28155179 28155229 -225101354 + (CATATA)n Simple_repeat Simple_repeat 5 54 0 1491 181 7 17 chr2 28155633 28155932 -225100651 + AluJo SINE Alu 1 296 -16 1702 147 41 10 chr2 28155977 28156269 -225100314 - AluSq SINE Alu -12 301 1 675 179 43 0 chr2 28156400 28156517 -225100066 + FLAM_C SINE Alu 9 130 -13 4830 157 31 32 chr2 28156597 28157597 -225098986 - L1PA16 LINE L1 0 6166 5171 2319 87 0 3 chr2 28157671 28157980 -225098603 - AluSc SINE Alu -1 308 1 2006 127 3 7 chr2 28158231 28158538 -225098045 - AluSx SINE Alu -1 311 6 2119 80 7 14 chr2 28159544 28159701 -225096882 - AluSx SINE Alu -21 291 135 2150 100 3 3 chr2 28159701 28160011 -225096572 - AluY SINE Alu -1 310 1 2119 80 7 14 chr2 28160011 28160142 -225096441 - AluSx SINE Alu -177 135 5 2152 76 6 45 chr2 28160400 28160714 -225095869 + AluSc SINE Alu 1 302 -7 29 0 0 0 chr2 28160870 28160899 -225095684 + AT_rich Low_complexity Low_complexity 1 29 0 2209 112 0 13 chr2 28160899 28161212 -225095371 + AluSx SINE Alu 3 311 -1 1815 137 11 0 chr2 28161224 28161508 -225095075 + AluSx SINE Alu 26 312 0 1446 194 19 13 chr2 28161510 28161819 -225094764 + AluJo SINE Alu 1 311 -1 1376 168 17 46 chr2 28161830 28161938 -225094645 + L1MB2 LINE L1 5476 5586 -585 2123 87 3 3 chr2 28161938 28162227 -225094356 + AluSx SINE Alu 1 289 -23 1376 168 17 46 chr2 28162227 28162481 -225094102 + L1MB2 LINE L1 5586 5846 -325 2206 104 0 3 chr2 28162481 28162790 -225093793 + AluSx SINE Alu 1 308 -4 1376 168 17 46 chr2 28162790 28162818 -225093765 + L1MB2 LINE L1 5846 6147 -24 1912 137 7 0 chr2 28162823 28163116 -225093467 - AluSp SINE Alu -18 295 1 2074 192 35 12 chr2 28163129 28163609 -225092974 + L1MB7 LINE L1 3473 3963 -2183 1132 159 10 24 chr2 28163610 28163818 -225092765 + AluJo SINE Alu 85 289 -23 232 191 64 0 chr2 28163882 28163929 -225092654 + Alu SINE Alu 115 164 -139 2906 152 124 64 chr2 28163929 28164486 -225092097 + L1MB7 LINE L1 4560 5083 -1063 2413 81 0 0 chr2 28164486 28164794 -225091789 + AluSc SINE Alu 1 308 -1 2906 152 124 64 chr2 28164794 28164811 -225091772 + L1MB7 LINE L1 5083 5098 -1048 1771 112 19 4 chr2 28164811 28165078 -225091505 + AluSx SINE Alu 5 275 -37 2906 152 124 64 chr2 28165078 28165091 -225091492 + L1MB7 LINE L1 5098 5109 -1037 401 0 20 0 chr2 28165091 28165140 -225091443 + (CAA)n Simple_repeat Simple_repeat 2 51 0 2906 152 124 64 chr2 28165140 28165342 -225091241 + L1MB7 LINE L1 5109 5398 -748 1299 134 5 5 chr2 28165348 28165557 -225091026 + AluSx SINE Alu 1 209 -103 2260 164 43 49 chr2 28165581 28166070 -225090513 + L1MB7 LINE L1 5388 5873 -311 1964 131 0 16 chr2 28166071 28166385 -225090198 + AluSx SINE Alu 1 309 -3 766 220 0 0 chr2 28166429 28166570 -225090013 + FLAM_C SINE Alu 2 142 -1 1045 181 65 75 chr2 28167260 28167503 -225089080 + L1MB7 LINE L1 5854 6095 -89 2107 132 0 3 chr2 28167503 28167813 -225088770 + AluSx SINE Alu 4 312 0 1045 181 65 75 chr2 28167813 28167861 -225088722 + L1MB7 LINE L1 6095 6142 -42 2016 75 11 14 chr2 28168481 28168828 -225087755 + AluY SINE Alu 1 346 0 632 148 129 77 chr2 28168834 28168989 -225087594 + AluJo SINE Alu 86 248 -64 237 143 48 0 chr2 28169050 28169092 -225087491 + AluJo SINE Alu 247 290 -12 23 0 0 0 chr2 28169095 28169118 -225087465 + AT_rich Low_complexity Low_complexity 1 23 0 1988 132 0 7 chr2 28169118 28169421 -225087162 + AluSq SINE Alu 1 301 -12 1721 141 44 3 chr2 28169561 28169858 -225086725 + AluSx SINE Alu 1 309 -3 1947 121 3 17 chr2 28170222 28170520 -225086063 + AluSg SINE Alu 1 294 -16 2253 90 0 3 chr2 28170619 28170930 -225085653 + AluSg SINE Alu 1 310 0 288 313 75 52 chr2 28170977 28171162 -225085421 + L1MEc LINE L1 1520 1716 -4680 2087 127 3 0 chr2 28171162 28171469 -225085114 + AluSx SINE Alu 1 308 -4 288 313 75 52 chr2 28171469 28171590 -225084993 + L1MEc LINE L1 1716 1833 -4563 1903 116 7 14 chr2 28171605 28171898 -225084685 + AluSx SINE Alu 5 295 -17 883 185 10 36 chr2 28172141 28172395 -225084188 + AluJo SINE Alu 123 371 0 2054 95 3 30 chr2 28173800 28174104 -225082479 + AluSx SINE Alu 2 297 -15 296 132 2 0 chr2 28175122 28175175 -225081408 + Alu SINE Alu 1 40 -259 1459 68 16 0 chr2 28175305 28175496 -225081087 - AluY SINE Alu -117 194 1 2190 110 3 0 chr2 28175684 28175992 -225080591 - AluSq SINE Alu -4 309 1 274 284 98 10 chr2 28175995 28176097 -225080486 - MIR SINE MIR -57 151 41 559 262 168 38 chr2 28176192 28176425 -225080158 + L1P4 LINE L1 4827 5028 -1137 2344 93 0 0 chr2 28176425 28176736 -225079847 - AluSq SINE Alu -2 311 1 559 262 168 38 chr2 28176736 28177230 -225079353 + L1P4 LINE L1 5028 5659 -506 690 115 10 0 chr2 28177385 28177481 -225079102 - U6 snRNA snRNA -7 100 4 489 223 174 8 chr2 28177545 28177666 -225078917 - MIR SINE MIR -102 160 20 881 135 23 0 chr2 28177683 28177816 -225078767 - AluJo SINE Alu -176 136 1 260 154 0 0 chr2 28178002 28178041 -225078542 + MIR3 SINE MIR 167 205 -3 778 232 18 12 chr2 28178151 28178315 -225078268 - FRAM SINE Alu 0 166 2 1760 150 0 11 chr2 28178700 28179009 -225077574 - AluJb SINE Alu 0 306 1 714 204 0 0 chr2 28180378 28180491 -225076092 - FLAM_A SINE Alu -29 113 1 321 347 41 14 chr2 28180495 28180642 -225075941 + L2 LINE L2 3121 3271 -1 2323 78 0 3 chr2 28180892 28181188 -225075395 - AluY SINE Alu -16 295 1 384 22 0 0 chr2 28183308 28183353 -225073230 + (CA)n Simple_repeat Simple_repeat 1 45 0 2218 95 7 3 chr2 28183416 28183720 -225072863 - AluSg SINE Alu -4 306 2 2129 100 3 0 chr2 28183864 28184165 -225072418 - AluSx SINE Alu -10 302 1 1825 100 30 7 chr2 28184176 28184447 -225072136 - AluSq SINE Alu -16 297 21 1429 139 0 54 chr2 28184884 28185142 -225071441 - AluJb SINE Alu -11 301 58 2296 60 0 0 chr2 28186192 28186495 -225070088 + AluY SINE Alu 1 303 0 232 274 0 0 chr2 28187023 28187085 -225069498 + A-rich Low_complexity Low_complexity 1 62 0 255 220 90 40 chr2 28187718 28187818 -225068765 - L2 LINE L2 -3 3310 3206 1941 142 7 7 chr2 28188823 28189126 -225067457 - AluSx SINE Alu -9 303 1 772 265 29 20 chr2 28189264 28189468 -225067115 - MIR SINE MIR 0 262 57 1964 106 32 0 chr2 28189483 28189766 -225066817 - AluSx SINE Alu -20 292 1 1270 151 114 41 chr2 28189873 28190041 -225066542 - AluJb SINE Alu -21 291 94 2233 82 3 0 chr2 28190041 28190335 -225066248 - AluSq SINE Alu -18 295 1 1270 151 114 41 chr2 28190335 28190437 -225066146 - AluJb SINE Alu -218 94 1 1140 101 23 105 chr2 28190702 28190921 -225065662 + AluSg/x SINE Alu 85 285 -27 204 298 0 18 chr2 28190991 28191048 -225065535 - MIR SINE MIR -132 76 21 237 306 41 50 chr2 28191875 28191996 -225064587 - MIR SINE MIR -69 193 74 503 267 92 63 chr2 28192009 28192215 -225064368 - MIR SINE MIR -19 243 32 239 171 24 0 chr2 28192528 28192569 -225064014 + MIR SINE MIR 108 149 -59 1898 130 7 0 chr2 28192571 28192864 -225063719 + AluSp SINE Alu 2 296 -17 27 0 0 0 chr2 28193682 28193709 -225062874 + AT_rich Low_complexity Low_complexity 1 27 0 2077 44 106 0 chr2 28195291 28195565 -225061018 - AluY SINE Alu -8 303 1 705 76 0 0 chr2 28195570 28195662 -225060921 - AluSp/q SINE Alu -17 296 205 26 0 0 0 chr2 28196268 28196294 -225060289 + AT_rich Low_complexity Low_complexity 1 26 0 847 144 144 34 chr2 28197870 28198106 -225058477 - AluY SINE Alu -8 303 42 308 83 42 0 chr2 28198211 28198259 -225058324 + Alu SINE Alu 247 296 -4 280 303 104 74 chr2 28198445 28198676 -225057907 + L2 LINE L2 3076 3313 0 199 275 67 33 chr2 28198664 28198784 -225057799 - L2 LINE L2 -844 2470 2347 * 578 136 0 0 chr2 28198936 28199024 -225057559 + AluSg/x SINE Alu 216 303 -7 186 200 0 0 chr2 28199047 28199085 -225057498 + CT-rich Low_complexity Low_complexity 3 43 -4 716 229 0 0 chr2 28199085 28199207 -225057376 - FLAM_A SINE Alu -9 124 3 213 121 0 0 chr2 28199209 28199242 -225057341 + (T)n Simple_repeat Simple_repeat 1 33 0 390 319 80 0 chr2 28199295 28199433 -225057150 + MIR SINE MIR 66 214 -48 1014 102 0 0 chr2 28199611 28199739 -225056844 + AluSq/x SINE Alu 1 128 -184 2673 49 0 3 chr2 28199989 28200296 -225056287 + AluY SINE Alu 1 306 -5 2097 126 3 32 chr2 28200455 28200567 -225056016 + AluSx SINE Alu 4 118 -194 2188 103 14 0 chr2 28200567 28200859 -225055724 + AluSg SINE Alu 1 296 -14 2097 126 3 32 chr2 28200859 28201056 -225055527 + AluSx SINE Alu 118 304 -8 2258 95 0 0 chr2 28201139 28201424 -225055159 + AluSx SINE Alu 5 289 -23 27 0 0 0 chr2 28201557 28201584 -225054999 + AT_rich Low_complexity Low_complexity 1 27 0 500 156 0 0 chr2 28201587 28201664 -225054919 - FLAM_A SINE Alu -35 107 31 402 77 0 0 chr2 28202094 28202146 -225054437 + Alu SINE Alu 246 297 -15 561 301 17 7 chr2 28202146 28202442 -225054141 - L1M4 LINE L1 -1577 4569 4271 364 273 8 8 chr2 28202494 28202626 -225053957 - L1M4 LINE L1 -2685 3461 3330 1953 125 3 77 chr2 28202627 28202807 -225053776 - AluJb SINE Alu -1 311 166 2299 107 0 3 chr2 28202807 28203105 -225053478 - AluSx SINE Alu -15 297 1 1953 125 3 77 chr2 28203105 28203260 -225053323 - AluJb SINE Alu -146 166 1 1089 299 98 27 chr2 28203280 28203779 -225052804 - L1MEd LINE L1 -5492 627 90 2143 96 50 0 chr2 28203779 28204059 -225052524 + AluSx SINE Alu 1 294 -18 1089 299 98 27 chr2 28204059 28204070 -225052513 - L1MEd LINE L1 -6029 90 81 420 189 142 0 chr2 28205132 28205238 -225051345 + MIR3 SINE MIR 44 164 -44 189 147 0 0 chr2 28205688 28205722 -225050861 + (GGGA)n Simple_repeat Simple_repeat 4 37 0 1956 116 7 3 chr2 28257857 28258160 -224998423 + AluSx SINE Alu 5 308 -4 25 51 0 0 chr2 28258680 28258719 -224997864 + GC_rich Low_complexity Low_complexity 1 39 0 860 273 71 33 chr2 28259267 28259466 -224997117 - L1MC/D LINE L1 -2160 5648 5458 1821 142 10 3 chr2 28259466 28259762 -224996821 + AluJo SINE Alu 1 298 -14 860 273 71 33 chr2 28259762 28259929 -224996654 - L1MC/D LINE L1 -2350 5458 5268 1495 189 43 0 chr2 28259940 28260220 -224996363 - AluJo SINE Alu -20 292 1 247 219 16 0 chr2 28260624 28260688 -224995895 + L1ME LINE L1 5713 5777 -344 1331 139 33 0 chr2 28260690 28260905 -224995678 + AluSc SINE Alu 1 222 -87 185 83 28 0 chr2 28260917 28260953 -224995630 + (CAAAAA)n Simple_repeat Simple_repeat 4 40 0 306 0 0 0 chr2 28260967 28261001 -224995582 + (CAA)n Simple_repeat Simple_repeat 2 35 0 1740 171 0 10 chr2 28262598 28262903 -224993680 - AluJo SINE Alu -10 302 1 346 281 110 48 chr2 28262950 28263274 -224993309 - L1MC/D LINE L1 -1360 4786 4431 23 0 0 0 chr2 28263332 28263355 -224993228 + AT_rich Low_complexity Low_complexity 1 23 0 1360 171 0 0 chr2 28263372 28263606 -224992977 - AluSx SINE Alu -22 290 57 282 221 26 26 chr2 28264177 28264254 -224992329 - L2 LINE L2 -1 3271 3195 440 231 97 22 chr2 28264295 28264429 -224992154 - MIR SINE MIR -82 180 37 260 298 137 23 chr2 28265685 28265816 -224990767 - L2 LINE L2 -8 3305 3160 181 239 0 60 chr2 28265974 28266041 -224990542 + L2 LINE L2 1696 1758 -1556 2014 104 0 4 chr2 28266190 28266468 -224990115 + AluSg SINE Alu 1 277 -33 473 147 53 11 chr2 28266571 28266666 -224989917 - AluSg/x SINE Alu -6 306 208 404 212 0 62 chr2 28266725 28266904 -224989679 + C-rich Low_complexity Low_complexity 3 170 0 912 174 99 36 chr2 28267098 28267351 -224989232 - AluJo SINE Alu -43 269 1 325 213 37 29 chr2 28268863 28268999 -224987584 + G-rich Low_complexity Low_complexity 5 141 0 1463 173 19 0 chr2 28269064 28269324 -224987259 - L1MA7 LINE L1 -69 6222 5958 333 47 0 0 chr2 28271302 28271345 -224985238 + (CA)n Simple_repeat Simple_repeat 1 43 0 189 321 67 61 chr2 28271416 28271454 -224985129 - L2 LINE L2 -22 3250 3214 228 67 0 0 chr2 28271454 28271484 -224985099 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 189 321 67 61 chr2 28271484 28271610 -224984973 - L2 LINE L2 -58 3214 3085 193 319 32 64 chr2 28271956 28272050 -224984533 - MIR3 SINE MIR -17 191 101 2004 105 3 10 chr2 28272132 28272427 -224984156 + AluSq SINE Alu 1 293 -20 25 51 0 0 chr2 28272463 28272502 -224984081 + AT_rich Low_complexity Low_complexity 1 39 0 1289 103 5 26 chr2 28273236 28273430 -224983153 + AluY SINE Alu 101 290 -21 24 0 0 0 chr2 28273430 28273454 -224983129 + AT_rich Low_complexity Low_complexity 1 24 0 2161 111 10 0 chr2 28273473 28273779 -224982804 - AluSg SINE Alu -1 309 1 712 282 75 34 chr2 28273930 28274288 -224982295 - HAL1 LINE L1 -440 2067 1695 1721 243 115 69 chr2 28274348 28275440 -224981143 - HAL1 LINE L1 -749 1758 616 3090 198 72 37 chr2 28275673 28275936 -224980647 - L1MC4 LINE L1 0 8042 7790 1571 147 11 39 chr2 28275936 28276221 -224980362 - AluJo SINE Alu -14 298 22 3090 198 72 37 chr2 28276221 28276801 -224979782 - L1MC4 LINE L1 -252 7790 7169 831 193 30 24 chr2 28276805 28276971 -224979612 - FRAM SINE Alu -9 167 1 644 296 53 14 chr2 28277222 28277438 -224979145 - MIR SINE MIR -21 241 16 548 300 78 33 chr2 28278007 28278187 -224978396 - MIR3 SINE MIR -4 204 17 433 243 176 91 chr2 28278233 28278529 -224978054 + MER102b DNA MER1_type 21 341 0 424 281 100 20 chr2 28279028 28279277 -224977306 - L2 LINE L2 -798 2516 2248 600 275 47 19 chr2 28279508 28279719 -224976864 + L1ME LINE L1 5523 5739 -431 642 255 115 32 chr2 28279846 28280124 -224976459 + MLT1J2 LTR MaLR 121 421 -29 275 145 101 14 chr2 28280143 28280212 -224976371 + L1ME LINE L1 5743 5817 -345 1603 184 7 13 chr2 28280258 28280557 -224976026 + AluJb SINE Alu 1 297 -15 622 297 152 49 chr2 28280582 28281091 -224975492 + L2 LINE L2 2446 3051 -262 31 0 0 0 chr2 28282040 28282071 -224974512 + AT_rich Low_complexity Low_complexity 1 31 0 238 317 37 0 chr2 28283399 28283481 -224973102 - L2 LINE L2 -601 2713 2629 236 287 17 26 chr2 28283595 28283710 -224972873 + L1MC/D LINE L1 5772 5885 -2157 252 283 33 11 chr2 28284047 28284139 -224972444 + L1ME LINE L1 110 203 -5867 1268 268 62 49 chr2 28284500 28285086 -224971497 + L1ME LINE L1 391 989 -5081 2118 72 3 78 chr2 28285086 28285419 -224971164 + AluSg SINE Alu 3 310 0 1268 268 62 49 chr2 28285419 28285522 -224971061 + L1ME LINE L1 989 1089 -4981 4029 110 19 19 chr2 28285543 28286208 -224970375 + SVA Other Other 13 677 -709 892 83 38 0 chr2 28286313 28286445 -224970138 - AluSq/x SINE Alu -175 137 1 187 277 62 15 chr2 28286787 28286852 -224969731 + MIR SINE MIR 79 146 -116 1660 116 33 0 chr2 28286852 28287125 -224969458 - AluSx SINE Alu 0 315 35 222 91 0 0 chr2 28288192 28288225 -224968358 + (TG)n Simple_repeat Simple_repeat 2 34 0 245 208 228 30 chr2 28288922 28289023 -224967560 - L2 LINE L2 -2 3270 3150 580 256 8 0 chr2 28289228 28289353 -224967230 - MIR3 SINE MIR -48 160 35 203 356 13 13 chr2 28289884 28290033 -224966550 + C-rich Low_complexity Low_complexity 1 149 0 647 265 41 20 chr2 28290540 28290736 -224965847 - MIR SINE MIR -51 211 12 381 278 80 20 chr2 28291247 28291398 -224965185 - MIR SINE MIR 0 262 103 287 158 123 0 chr2 28291693 28291750 -224964833 - L1ME LINE L1 -456 5665 5602 1778 102 37 0 chr2 28291801 28292047 -224964536 - AluSx SINE Alu -46 266 12 667 252 105 58 chr2 28292060 28292421 -224964162 + L1ME4a LINE L1 5549 5926 -195 2107 108 10 0 chr2 28292492 28292797 -224963786 - AluSx SINE Alu -4 308 1 1084 218 36 45 chr2 28292893 28293037 -224963546 + L1MA4 LINE L1 5991 6135 -165 1592 133 23 77 chr2 28293037 28293166 -224963417 + AluSx SINE Alu 1 135 -172 2232 72 7 7 chr2 28293166 28293471 -224963112 + AluY SINE Alu 1 305 -6 1592 133 23 77 chr2 28293471 28293664 -224962919 + AluSx SINE Alu 135 307 0 1084 218 36 45 chr2 28293664 28293826 -224962757 + L1MA4 LINE L1 6135 6295 -5 1410 196 19 11 chr2 28293899 28294165 -224962418 - REP3 LTR ERV -294 268 1 314 214 21 100 chr2 28294167 28294211 -224962372 + HAL1 LINE L1 2303 2349 -158 1418 186 3 20 chr2 28294211 28294535 -224962048 + AluJb SINE Alu 1 319 0 314 214 21 100 chr2 28294535 28294627 -224961956 + HAL1 LINE L1 2349 2431 -76 * 379 153 0 0 chr2 28294617 28294676 -224961907 - L1M2 LINE L1 -535 5756 5698 * 725 236 75 80 chr2 28294670 28295169 -224961414 - L1MC5 LINE L1 -869 6939 6414 477 128 37 28 chr2 28295383 28295492 -224961091 + Alu SINE Alu 2 111 -200 242 299 153 28 chr2 28296201 28296345 -224960238 - MIR3 SINE MIR -32 176 15 261 283 160 0 chr2 28297668 28297774 -224958809 + L2 LINE L2 3142 3264 -8 232 270 54 40 chr2 28297805 28297879 -224958704 - L2 LINE L2 -13 3259 3185 472 299 148 27 chr2 28298732 28299063 -224957520 - L2 LINE L2 -3 3310 2940 2234 97 7 0 chr2 28299453 28299752 -224956831 - AluSx SINE Alu -11 301 1 340 170 19 0 chr2 28299868 28299921 -224956662 - Alu SINE Alu -247 55 2 1654 199 22 60 chr2 28299926 28300373 -224956210 - L1ME LINE L1 -483 5683 5254 372 184 80 8 chr2 28300374 28300499 -224956084 - L1ME LINE L1 -944 5202 5069 2219 92 7 0 chr2 28300503 28300806 -224955777 - AluSx SINE Alu -7 305 1 1556 229 66 18 chr2 28300811 28301204 -224955379 - MLT1E2 LTR MaLR 0 626 215 639 183 14 21 chr2 28301206 28301348 -224955235 - MLT2C1 LTR ERVL -256 141 1 690 214 0 0 chr2 28301350 28301495 -224955088 - L1ME LINE L1 -1072 5074 4930 2094 125 0 0 chr2 28301517 28301813 -224954770 - AluSq SINE Alu -17 296 1 2205 107 0 3 chr2 28302974 28303284 -224953299 + AluSc SINE Alu 1 309 0 1717 125 3 56 chr2 28303595 28303733 -224952850 + AluSg SINE Alu 1 116 -194 1961 135 3 0 chr2 28303733 28304030 -224952553 + AluSq SINE Alu 1 298 -15 1717 125 3 56 chr2 28304030 28304194 -224952389 + AluSg SINE Alu 116 287 -23 189 0 0 0 chr2 28304203 28304224 -224952359 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1817 122 16 7 chr2 28304230 28304533 -224952050 + AluY SINE Alu 2 307 -4 1531 161 6 54 chr2 28304835 28305151 -224951432 - AluJb SINE Alu -11 301 1 754 218 18 12 chr2 28306033 28306198 -224950385 - MIR3 SINE MIR -7 201 36 2304 57 0 0 chr2 28306864 28307168 -224949415 - AluY SINE Alu 0 304 1 660 220 16 81 chr2 28308203 28308389 -224948194 - MIR3 SINE MIR -16 192 19 429 194 313 15 chr2 28308495 28308629 -224947954 - MER5A DNA MER1_type -12 177 4 508 307 56 6 chr2 28308642 28308821 -224947762 + MIR SINE MIR 29 216 -46 876 320 52 41 chr2 28308970 28309411 -224947172 - L2 LINE L2 -1 3271 2826 993 55 0 0 chr2 28309427 28309554 -224947029 + AluY SINE Alu 171 297 -14 2140 108 3 7 chr2 28310683 28310988 -224945595 + AluSx SINE Alu 1 304 -8 360 196 38 15 chr2 28312035 28312117 -224944466 - MER5A DNA MER1_type -80 105 18 1985 128 0 0 chr2 28312138 28312434 -224944149 + AluSx SINE Alu 1 296 -16 648 211 88 14 chr2 28312454 28312539 -224944044 + MER5A DNA MER1_type 29 106 -83 1845 140 7 7 chr2 28312539 28312832 -224943751 - AluJo SINE Alu -19 293 1 648 211 88 14 chr2 28312832 28312893 -224943690 + MER5A DNA MER1_type 106 186 -3 1941 111 10 39 chr2 28313004 28313172 -224943411 - AluSc SINE Alu -12 297 140 2185 95 3 0 chr2 28313172 28313468 -224943115 - AluSp SINE Alu -8 305 9 1941 111 10 39 chr2 28313468 28313605 -224942978 - AluSc SINE Alu -169 140 1 330 233 133 11 chr2 28313606 28313696 -224942887 + L2 LINE L2 3212 3312 -1 2270 100 0 3 chr2 28314787 28315096 -224941487 - AluSx SINE Alu 0 312 5 2271 99 0 3 chr2 28315448 28315762 -224940821 - AluSq SINE Alu 0 313 1 2062 121 0 3 chr2 28316698 28316995 -224939588 - AluSx SINE Alu -16 296 1 2074 133 3 0 chr2 28318043 28318352 -224938231 + AluSx SINE Alu 1 310 -2 1703 171 0 16 chr2 28318361 28318666 -224937917 - AluJo SINE Alu -12 300 1 313 287 11 11 chr2 28318789 28318876 -224937707 + MIR SINE MIR 15 101 -161 1664 130 4 0 chr2 28318878 28319181 -224937402 - AluSc SINE Alu 0 328 25 756 132 0 39 chr2 28319220 28319349 -224937234 + AluSg/x SINE Alu 186 309 0 670 237 0 7 chr2 28319350 28319502 -224937081 + MIR SINE MIR 111 261 -1 326 276 0 58 chr2 28320029 28320116 -224936467 - L2 LINE L2 -7 3306 3225 1882 152 3 10 chr2 28320116 28320419 -224936164 - AluSx SINE Alu -10 302 2 306 306 27 54 chr2 28320663 28320774 -224935809 + MLT1K LTR MaLR 141 248 -340 26 50 0 0 chr2 28320798 28320838 -224935745 + AT_rich Low_complexity Low_complexity 1 40 0 28 61 0 0 chr2 28320963 28321012 -224935571 + AT_rich Low_complexity Low_complexity 1 49 0 598 321 62 22 chr2 28321047 28321445 -224935138 - L1MC4a LINE L1 -370 5987 5726 245 280 0 13 chr2 28321691 28321766 -224934817 + MLT1K LTR MaLR 500 573 -15 192 200 0 0 chr2 28322112 28322157 -224934426 + A-rich Low_complexity Low_complexity 1 45 0 194 289 66 86 chr2 28322513 28322665 -224933918 - MIR SINE MIR -33 229 81 492 233 0 0 chr2 28323061 28323147 -224933436 + L2 LINE L2 3223 3308 -5 283 234 47 111 chr2 28323643 28323799 -224932784 + MIR3 SINE MIR 51 192 -54 1967 126 3 0 chr2 28323806 28324121 -224932462 + AluSx SINE Alu 1 312 0 2141 130 0 0 chr2 28324123 28324431 -224932152 + AluSx SINE Alu 1 308 -4 888 150 21 42 chr2 28324996 28325189 -224931394 + MER53 DNA DNA 1 189 0 276 333 30 22 chr2 28325831 28325966 -224930617 + L2 LINE L2 2652 2787 -527 1758 155 0 7 chr2 28326913 28327210 -224929373 - AluSx SINE Alu -17 295 1 2151 96 10 0 chr2 28327309 28327612 -224928971 - AluSp SINE Alu -7 306 1 2624 198 112 105 chr2 28327614 28327888 -224928695 - L1MC4a LINE L1 -753 5629 5359 548 155 0 21 chr2 28327888 28327985 -224928598 + AluSg/x SINE Alu 212 306 -3 2624 198 112 105 chr2 28327985 28328824 -224927759 - L1MC4a LINE L1 -1023 5359 4411 4463 233 66 16 chr2 28328847 28330288 -224926295 - L1M4c LINE L1 -2599 3783 2303 614 152 124 35 chr2 28330303 28330448 -224926135 - AluJo SINE Alu -18 294 137 591 259 161 0 chr2 28330452 28330657 -224925926 - L1M4c LINE L1 -4598 1965 1728 1011 189 0 0 chr2 28330658 28330838 -224925745 - AluJo SINE Alu -1 311 132 23 0 0 29 chr2 28330840 28330855 -224925728 + AT_rich Low_complexity Low_complexity 1 15 -18 1365 74 16 0 chr2 28330855 28331045 -224925538 - L1MA1 LINE L1 0 6302 6110 23 0 0 29 chr2 28331045 28331063 -224925520 + AT_rich Low_complexity Low_complexity 15 33 0 2068 86 18 0 chr2 28331063 28331341 -224925242 - AluSc SINE Alu -26 283 1 798 117 36 0 chr2 28331348 28331459 -224925124 - AluJo SINE Alu -185 127 13 327 217 48 12 chr2 28331488 28331571 -224925012 - L1M4c LINE L1 -4706 1676 1591 1632 172 3 7 chr2 28331632 28331922 -224924661 - AluJb SINE Alu -23 289 1 1996 113 3 14 chr2 28331953 28332246 -224924337 - AluSx SINE Alu -22 290 1 2323 86 3 3 chr2 28332303 28332616 -224923967 - AluSp SINE Alu 0 313 1 1520 174 71 3 chr2 28332710 28332827 -224923756 + AluJb SINE Alu 1 109 -203 459 0 0 0 chr2 28332827 28332878 -224923705 + (CA)n Simple_repeat Simple_repeat 2 52 0 1520 174 71 3 chr2 28332878 28333042 -224923541 + AluJb SINE Alu 109 301 -11 1028 197 19 9 chr2 28333050 28333263 -224923320 + AluJo SINE Alu 83 297 -15 433 225 48 12 chr2 28333263 28333424 -224923159 - L1M4c LINE L1 -4851 1531 1273 2615 118 83 59 chr2 28333426 28333968 -224922615 - SVA Other Other -263 1123 569 2012 109 10 13 chr2 28334106 28334417 -224922166 + AluSq SINE Alu 1 310 -3 2368 82 7 0 chr2 28334426 28334731 -224921852 + AluSc SINE Alu 1 307 -2 1487 173 43 22 chr2 28334923 28335200 -224921383 + REP3 LTR ERV 263 545 -17 1510 277 153 35 chr2 28335266 28336094 -224920489 - HAL1 LINE L1 -300 2207 1243 521 64 13 0 chr2 28336094 28336172 -224920411 + (TCTA)n Simple_repeat Simple_repeat 3 81 0 1510 277 153 35 chr2 28336172 28336330 -224920253 - HAL1 LINE L1 -1264 1243 1105 1010 177 0 0 chr2 28336336 28336500 -224920083 - FRAM SINE Alu -12 164 1 736 226 39 87 chr2 28336504 28336814 -224919769 - HAL1 LINE L1 -1423 1084 790 439 227 98 0 chr2 28337138 28337301 -224919282 + L1ME4a LINE L1 5930 6108 -13 2106 110 0 3 chr2 28337302 28337592 -224918991 + AluSc SINE Alu 1 289 -20 186 71 0 0 chr2 28337654 28337682 -224918901 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1456 157 52 35 chr2 28337684 28337971 -224918612 - AluJo SINE Alu -20 292 1 721 302 43 21 chr2 28337992 28338227 -224918356 - MIR SINE MIR 0 262 23 2494 67 0 0 chr2 28338306 28338618 -224917965 + AluSq SINE Alu 1 312 -1 988 182 0 0 chr2 28338618 28338788 -224917795 + AluSg/x SINE Alu 133 302 -8 467 204 0 82 chr2 28338796 28338820 -224917763 - L1MC4 LINE L1 -5 8037 8013 2933 65 16 5 chr2 28338820 28339191 -224917392 - THE1C LTR MaLR 0 375 1 467 204 0 82 chr2 28339191 28339313 -224917270 - L1MC4 LINE L1 -29 8013 7903 189 0 0 0 chr2 28339319 28339340 -224917243 + (TTA)n Simple_repeat Simple_repeat 3 23 0 361 170 7 92 chr2 28339341 28339436 -224917147 - L1ME1 LINE L1 -54 6112 6010 1794 134 39 16 chr2 28339436 28339741 -224916842 + AluJo SINE Alu 1 312 0 361 170 7 92 chr2 28339741 28340223 -224916360 - L1ME1 LINE L1 -156 6010 5587 1257 176 178 33 chr2 28340228 28340587 -224915996 - L1MC4 LINE L1 -131 7911 7501 231 36 0 0 chr2 28341913 28341941 -224914642 + (TAA)n Simple_repeat Simple_repeat 2 29 0 693 282 75 25 chr2 28341942 28342183 -224914400 - MIR SINE MIR -8 254 2 2028 158 47 30 chr2 28342195 28342601 -224913982 - L1MC1 LINE L1 -5 6328 5916 1619 178 3 10 chr2 28342611 28342904 -224913679 - AluJo SINE Alu -21 291 1 1824 162 7 0 chr2 28343045 28343348 -224913235 + AluJb SINE Alu 1 305 -7 365 262 90 33 chr2 28344492 28344614 -224911969 + MIR SINE MIR 106 234 -28 2112 121 26 9 chr2 28344700 28345039 -224911544 - L1MC1 LINE L1 0 6333 5989 221 256 158 65 chr2 28345082 28345328 -224911255 + L2 LINE L2 3034 3302 -11 337 282 51 54 chr2 28346100 28346166 -224910417 - MIR3 SINE MIR -57 151 86 2004 132 10 0 chr2 28346166 28346470 -224910113 + AluSx SINE Alu 3 309 -3 337 282 51 54 chr2 28346470 28346579 -224910004 - MIR3 SINE MIR -122 86 6 211 183 17 52 chr2 28346971 28347086 -224909497 + (CATATA)n Simple_repeat Simple_repeat 3 113 0 1832 86 10 66 chr2 28347108 28347163 -224909420 - L1PB2 LINE L1 -1 6150 6093 798 135 16 24 chr2 28347163 28347289 -224909294 - FLAM_C SINE Alu -5 128 4 1832 86 10 66 chr2 28347289 28347537 -224909046 - L1PB2 LINE L1 -58 6093 5864 341 223 45 0 chr2 28347548 28347660 -224908923 - MER113 DNA MER1_type? -400 121 5 238 299 72 28 chr2 28347694 28347813 -224908770 + MIR SINE MIR 38 163 -66 2020 105 7 7 chr2 28348510 28348805 -224907778 - AluSx SINE Alu -17 295 1 226 250 0 0 chr2 28348914 28348962 -224907621 - L2 LINE L2 0 3313 3266 299 319 72 18 chr2 28349856 28350022 -224906561 + MIR3 SINE MIR 12 186 -22 637 319 73 18 chr2 28350284 28350613 -224905970 + L2 LINE L2 2897 3243 -70 364 268 27 27 chr2 28350673 28350785 -224905798 - MIR SINE MIR -56 206 95 882 174 0 0 chr2 28358393 28358537 -224898046 + MER3 DNA MER1_type 1 144 -65 1228 169 40 0 chr2 28358583 28358784 -224897799 + MER3 DNA MER1_type 1 209 0 385 328 195 22 chr2 28359075 28359660 -224896923 - L2 LINE L2 0 3272 2596 215 269 51 13 chr2 28359876 28359954 -224896629 - L2 LINE L2 -1036 2278 2198 225 324 65 53 chr2 28360011 28360181 -224896402 + MER5B DNA MER1_type 1 172 -6 1499 171 22 4 chr2 28360851 28361158 -224895425 - AluSx SINE Alu 0 315 4 207 264 81 11 chr2 28361388 28361475 -224895108 - MIR SINE MIR -169 93 1 279 247 71 0 chr2 28362370 28362455 -224894128 + MIR SINE MIR 162 252 -10 1121 119 6 62 chr2 28362575 28362751 -224893832 - AluSp SINE Alu -147 166 1 542 306 110 5 chr2 28363758 28363967 -224892616 + MIR SINE MIR 13 243 -19 288 263 86 91 chr2 28364512 28364744 -224891839 + MIR SINE MIR 2 232 -30 2024 87 13 33 chr2 28365080 28365237 -224891346 - AluSx SINE Alu -19 293 143 2167 99 7 7 chr2 28365237 28365540 -224891043 - AluSp SINE Alu -5 308 6 2024 87 13 33 chr2 28365540 28365681 -224890902 - AluSx SINE Alu -169 143 1 30 27 0 0 chr2 28367134 28367171 -224889412 + AT_rich Low_complexity Low_complexity 1 37 0 1754 150 16 33 chr2 28367188 28367495 -224889088 - AluJo SINE Alu -10 302 1 210 37 0 0 chr2 28367496 28367523 -224889060 + (TTAA)n Simple_repeat Simple_repeat 3 29 0 2247 101 0 0 chr2 28367537 28367824 -224888759 - AluSx SINE Alu -25 287 1 1029 220 24 65 chr2 28367914 28368096 -224888487 - L1ME1 LINE L1 -5 6161 6059 1846 169 10 0 chr2 28368096 28368392 -224888191 + AluJo SINE Alu 1 299 -13 1029 220 24 65 chr2 28368392 28368536 -224888047 - L1ME1 LINE L1 -107 6059 5911 348 310 54 0 chr2 28369498 28369627 -224886956 - L2 LINE L2 0 3272 3137 258 304 7 34 chr2 28369655 28369803 -224886780 - L1M4 LINE L1 -3655 2491 2348 891 179 43 16 chr2 28369805 28369989 -224886594 + L1MC4a LINE L1 5744 5932 -1876 2426 91 0 3 chr2 28370046 28370355 -224886228 + AluY SINE Alu 1 308 -3 1792 137 37 7 chr2 28370391 28370691 -224885892 + L1MA9 LINE L1 5994 6302 -10 21 71 0 0 chr2 28370722 28370764 -224885819 + AT_rich Low_complexity Low_complexity 1 42 0 1699 126 4 0 chr2 28370902 28371156 -224885427 - AluY SINE Alu -16 295 41 374 213 197 27 chr2 28372397 28372580 -224884003 - HAL1b LINE L1 0 1348 1135 1043 148 6 0 chr2 28372592 28372754 -224883829 - AluJb SINE Alu -16 296 134 2072 139 3 3 chr2 28372754 28373057 -224883526 - AluSx SINE Alu -9 303 1 933 235 68 9 chr2 28373071 28373292 -224883291 - L1MB7 LINE L1 0 6184 5951 * 1141 198 8 32 chr2 28373265 28373518 -224883065 - L1MB7 LINE L1 -611 5567 5321 1049 153 11 11 chr2 28373586 28373763 -224882820 - L1MB8 LINE L1 -6 6172 5996 212 194 0 0 chr2 28374561 28374597 -224881986 + T-rich Low_complexity Low_complexity 1 36 0 1434 159 8 16 chr2 28374835 28375086 -224881497 + AluJo SINE Alu 21 269 -43 1836 154 7 3 chr2 28375213 28375506 -224881077 + AluJb SINE Alu 1 294 -18 1838 123 74 0 chr2 28375753 28376051 -224880532 - AluSx SINE Alu 0 318 1 754 177 8 0 chr2 28376133 28376257 -224880326 - FLAM_C SINE Alu -7 126 2 578 93 10 31 chr2 28376257 28376283 -224880300 + L1MA9 LINE L1 6209 6234 -78 2009 144 84 72 chr2 28376283 28376712 -224879871 - Tigger2a DNA MER2_type 0 434 1 578 93 10 31 chr2 28376712 28376782 -224879801 + L1MA9 LINE L1 6234 6303 -9 421 39 0 0 chr2 28376841 28376893 -224879690 - L1MA9 LINE L1 0 6312 6261 252 225 0 79 chr2 28376901 28376963 -224879620 + MIR SINE MIR 175 230 -32 1274 170 83 0 chr2 28376963 28377181 -224879402 + MER46A DNA MER2_type 1 236 0 252 225 0 79 chr2 28377181 28377207 -224879376 + MIR SINE MIR 230 256 -6 1530 189 6 26 chr2 28378788 28379100 -224877483 - AluJo SINE Alu -6 306 1 992 211 21 5 chr2 28379624 28379818 -224876765 - MER58A DNA MER1_type 0 224 28 285 188 71 59 chr2 28379820 28379905 -224876678 + MIR SINE MIR 167 252 -10 1598 183 3 20 chr2 28380874 28381174 -224875409 - AluJb SINE Alu -17 295 1 2146 97 47 7 chr2 28381840 28382140 -224874443 - AluSp SINE Alu -1 312 1 26 0 0 27 chr2 28382216 28382234 -224874349 + AT_rich Low_complexity Low_complexity 1 18 -18 354 98 0 0 chr2 28382234 28382285 -224874298 + (CA)n Simple_repeat Simple_repeat 2 52 0 26 0 0 27 chr2 28382285 28382303 -224874280 + AT_rich Low_complexity Low_complexity 18 36 0 38 0 0 0 chr2 28382449 28382487 -224874096 + AT_rich Low_complexity Low_complexity 1 38 0 2722 179 88 64 chr2 28382498 28383172 -224873411 - L1MC4 LINE L1 -14 8028 7331 2172 96 17 17 chr2 28383172 28383474 -224873109 + AluSx SINE Alu 1 302 -10 2722 179 88 64 chr2 28383474 28383596 -224872987 - L1MC4 LINE L1 -711 7331 7213 444 279 61 47 chr2 28383625 28383984 -224872599 - L1M4 LINE L1 -905 5241 4878 486 165 124 0 chr2 28383999 28384096 -224872487 - FLAM_A SINE Alu -6 136 28 2228 110 0 0 chr2 28384742 28385033 -224871550 - AluSx SINE Alu -21 291 1 380 217 30 74 chr2 28385041 28385244 -224871339 - L1M4 LINE L1 -1719 4427 4234 1472 204 14 0 chr2 28386928 28387217 -224869366 + AluJo SINE Alu 2 294 -18 1842 114 8 8 chr2 28387335 28387599 -224868984 - AluSq SINE Alu -23 290 27 1729 132 45 0 chr2 28387699 28387964 -224868619 - AluSx SINE Alu -18 294 18 266 246 127 17 chr2 28388113 28388231 -224868352 - L1MC4a LINE L1 -1737 6071 5941 * 470 128 216 0 chr2 28388225 28388327 -224868256 - L1MD3 LINE L1 0 7995 7872 6450 187 70 73 chr2 28388333 28388806 -224867777 - L1MC4a LINE L1 -220 7588 7115 2047 105 42 0 chr2 28388806 28389092 -224867491 - AluSg SINE Alu -12 298 1 6450 187 70 73 chr2 28389092 28390322 -224866261 - L1MC4a LINE L1 -693 7115 5883 2192 98 3 3 chr2 28390322 28390607 -224865976 + AluSc SINE Alu 1 285 -24 6450 187 70 73 chr2 28390607 28390630 -224865953 - L1MC4a LINE L1 -1925 5883 5861 1376 208 13 0 chr2 28390630 28390866 -224865717 + MER8 DNA MER2_type 1 239 0 6450 187 70 73 chr2 28390866 28390963 -224865620 - L1MC4a LINE L1 -1947 5861 5768 23 0 0 0 chr2 28391030 28391053 -224865530 + AT_rich Low_complexity Low_complexity 1 23 0 1264 35 0 0 chr2 28391658 28391800 -224864783 + AluY SINE Alu 158 299 -12 24 0 0 0 chr2 28391911 28391935 -224864648 + AT_rich Low_complexity Low_complexity 1 24 0 184 243 0 0 chr2 28392387 28392424 -224864159 - L2 LINE L2 0 3313 3277 1169 272 142 36 chr2 28392426 28392919 -224863664 - MLT1H1 LTR MaLR 0 555 11 940 150 39 0 chr2 28394873 28395026 -224861557 + FRAM SINE Alu 4 162 -14 1864 112 108 0 chr2 28395055 28395324 -224861259 - AluSx SINE Alu -14 298 1 901 240 115 6 chr2 28395489 28395812 -224860771 + L1MC4 LINE L1 7693 8041 -1 2250 74 32 0 chr2 28396232 28396515 -224860068 + AluSx SINE Alu 1 292 -20 1322 230 80 40 chr2 28396738 28397145 -224859438 - L1MC5 LINE L1 -30 7931 7497 1192 165 104 17 chr2 28397145 28397442 -224859141 - MER33 DNA MER1_type 0 324 2 1322 230 80 40 chr2 28397442 28397561 -224859022 - L1MC5 LINE L1 -464 7497 7384 368 86 35 0 chr2 28397614 28397672 -224858911 - MER31A LTR ERV1 -73 412 353 233 165 77 132 chr2 28397683 28397774 -224858809 - L1MC5 LINE L1 -602 7359 7274 508 262 44 1 chr2 28397785 28397917 -224858666 - MIR SINE MIR -55 153 9 1188 142 5 87 chr2 28400643 28400862 -224855721 + AluSg/x SINE Alu 89 289 -21 270 204 0 0 chr2 28400863 28400912 -224855671 + MER5B DNA MER1_type 126 174 -4 1516 149 29 18 chr2 28402780 28402926 -224853657 - AluSx SINE Alu -28 284 132 2039 86 13 57 chr2 28402926 28403240 -224853343 - AluY SINE Alu -11 300 1 1516 149 29 18 chr2 28403240 28403374 -224853209 - AluSx SINE Alu -180 132 1 364 271 51 132 chr2 28403499 28403589 -224852994 - L2 LINE L2 0 3313 3217 25 0 0 0 chr2 28403589 28403614 -224852969 + AT_rich Low_complexity Low_complexity 1 25 0 364 271 51 132 chr2 28403614 28403772 -224852811 - L2 LINE L2 -96 3217 3063 239 286 0 18 chr2 28403811 28403867 -224852716 - MIR SINE MIR -133 75 21 875 55 0 0 chr2 28404159 28404268 -224852315 - AluSx SINE Alu -1 311 203 940 117 0 0 chr2 28404268 28404396 -224852187 - AluSx SINE Alu -173 140 13 281 309 0 36 chr2 28404596 28404680 -224851903 + MIR SINE MIR 20 100 -162 217 263 79 0 chr2 28404709 28404785 -224851798 - L2 LINE L2 -32 3281 3200 310 257 0 66 chr2 28405445 28405628 -224850955 + A-rich Low_complexity Low_complexity 2 172 0 372 307 24 18 chr2 28406609 28406775 -224849808 + L3b LINE CR1 1223 1389 -194 27 0 0 0 chr2 28407043 28407070 -224849513 + AT_rich Low_complexity Low_complexity 1 27 0 818 188 43 81 chr2 28407093 28407327 -224849256 - AluJo SINE Alu -86 226 2 189 0 0 0 chr2 28407373 28407394 -224849189 + (T)n Simple_repeat Simple_repeat 1 21 0 223 330 124 0 chr2 28408105 28408202 -224848381 + MER5B DNA MER1_type 2 110 -68 249 57 0 0 chr2 28408440 28408475 -224848108 + (TG)n Simple_repeat Simple_repeat 1 35 0 2236 104 7 0 chr2 28408555 28408854 -224847729 - AluSp SINE Alu -12 301 1 21 0 0 0 chr2 28409713 28409734 -224846849 + AT_rich Low_complexity Low_complexity 1 21 0 930 176 43 16 chr2 28410333 28410521 -224846062 - L1ME LINE L1 -347 5819 5627 587 155 176 7 chr2 28411848 28411990 -224844593 + MER5A DNA MER1_type 2 167 -22 310 287 157 0 chr2 28412287 28412402 -224844181 + L2 LINE L2 3139 3271 -1 2166 96 10 14 chr2 28412494 28412810 -224843773 + AluSx SINE Alu 1 312 0 2299 78 7 7 chr2 28415200 28415494 -224841089 - AluY SINE Alu -17 294 1 354 237 0 26 chr2 28415668 28415744 -224840839 - 7SK RNA RNA -94 99 26 1353 186 119 7 chr2 28416531 28416800 -224839783 + AluJb SINE Alu 1 299 -13 680 164 0 0 chr2 28417069 28417173 -224839410 - FLAM_A SINE Alu -7 135 32 1806 167 3 23 chr2 28417261 28417567 -224839016 - AluJo SINE Alu -12 300 1 288 223 248 16 chr2 28417586 28417707 -224838876 + L2 LINE L2 3160 3308 -5 309 258 202 48 chr2 28418897 28419021 -224837562 - MIR SINE MIR -99 163 21 1006 183 163 133 chr2 28419980 28420580 -224836003 + L1MC4 LINE L1 7425 8042 0 624 218 160 0 chr2 28420671 28420827 -224835756 - MER5A DNA MER1_type 0 189 9 1863 154 31 7 chr2 28420859 28421152 -224835431 - AluSx SINE Alu -12 300 1 23 0 0 0 chr2 28421285 28421308 -224835275 + AT_rich Low_complexity Low_complexity 1 23 0 353 250 60 10 chr2 28421313 28421413 -224835170 + L2 LINE L2 3190 3294 -19 391 265 78 36 chr2 28421415 28421581 -224835002 + MIR SINE MIR 20 192 -70 297 215 56 47 chr2 28422620 28422727 -224833856 + L2 LINE L2 2610 2717 -597 184 381 58 7 chr2 28423036 28423175 -224833408 + L2 LINE L2 2866 3011 -261 598 219 214 14 chr2 28423360 28423405 -224833178 - MIR SINE MIR -3 259 224 1797 146 7 23 chr2 28423405 28423713 -224832870 - AluJo SINE Alu -9 303 1 598 219 214 14 chr2 28423713 28423882 -224832701 - MIR SINE MIR -38 224 2 327 242 16 65 chr2 28423957 28424143 -224832440 + C-rich Low_complexity Low_complexity 2 178 0 1653 125 49 28 chr2 28425739 28426027 -224830556 + AluJo SINE Alu 1 294 -18 189 261 0 0 chr2 28426400 28426446 -224830137 - MIR SINE MIR -65 143 98 24 0 0 0 chr2 28426482 28426506 -224830077 + AT_rich Low_complexity Low_complexity 1 24 0 30 45 0 0 chr2 28426536 28426580 -224830003 + AT_rich Low_complexity Low_complexity 1 44 0 1571 145 152 7 chr2 28426957 28427240 -224829343 + MER33 DNA MER1_type 1 324 0 1062 97 0 0 chr2 28427260 28427394 -224829189 - AluSg SINE Alu -176 134 1 24 32 0 0 chr2 28427991 28428022 -224828561 + AT_rich Low_complexity Low_complexity 1 31 0 223 150 33 0 chr2 28428059 28428119 -224828464 + (TA)n Simple_repeat Simple_repeat 2 63 0 2372 54 10 7 chr2 28428376 28428672 -224827911 - AluY SINE Alu -14 297 1 1774 169 0 0 chr2 28428680 28428964 -224827619 - AluJb SINE Alu -20 292 9 1956 122 7 14 chr2 28429926 28430079 -224826504 - AluSx SINE Alu -25 287 135 2417 88 3 0 chr2 28430079 28430385 -224826198 - AluSp SINE Alu -6 307 1 1956 122 7 14 chr2 28430385 28430519 -224826064 - AluSx SINE Alu -177 135 2 1030 157 6 34 chr2 28430883 28431061 -224825522 - AluJo SINE Alu -52 260 88 384 40 0 0 chr2 28431369 28431419 -224825164 + (TG)n Simple_repeat Simple_repeat 1 50 0 338 379 17 17 chr2 28431451 28431625 -224824958 - MLT1K LTR MaLR -210 378 205 512 225 99 0 chr2 28431779 28431890 -224824693 - L1MC/D LINE L1 -2151 5657 5536 31 76 0 0 chr2 28431937 28432003 -224824580 + AT_rich Low_complexity Low_complexity 1 66 0 1984 97 30 4 chr2 28432092 28432359 -224824224 - AluSq SINE Alu -15 298 25 1737 165 47 6 chr2 28432448 28432770 -224823813 - L1MB3 LINE L1 -7 6176 5842 31 76 0 0 chr2 28433100 28433166 -224823417 + AT_rich Low_complexity Low_complexity 1 66 0 232 313 47 0 chr2 28433263 28433327 -224823256 - L3 LINE CR1 -964 613 547 406 299 125 0 chr2 28433543 28433727 -224822856 + L1MC/D LINE L1 5451 5657 -2151 2139 120 0 26 chr2 28433918 28434226 -224822357 + AluSx SINE Alu 1 300 -12 2223 116 0 0 chr2 28434237 28434531 -224822052 + AluSc SINE Alu 1 294 -15 243 301 41 0 chr2 28434751 28434824 -224821759 - L2 LINE L2 -9 3304 3229 406 315 9 0 chr2 28434870 28434978 -224821605 - MIR3 SINE MIR -21 187 79 2322 97 3 0 chr2 28436484 28436784 -224819799 - AluSc SINE Alu -8 301 1 368 239 138 16 chr2 28437028 28437189 -224819394 - MIR SINE MIR -67 141 16 1464 167 158 40 chr2 28437293 28437641 -224818942 - MLT1B LTR MaLR -1 389 1 1658 108 19 19 chr2 28437698 28437956 -224818627 - AluSg SINE Alu -10 300 43 2141 111 3 7 chr2 28438588 28438886 -224817697 + AluSx SINE Alu 3 299 -13 243 188 0 0 chr2 28439544 28439592 -224816991 + GA-rich Low_complexity Low_complexity 2 49 0 267 319 86 17 chr2 28440135 28440251 -224816332 + L2 LINE L2 3146 3269 -3 342 227 76 15 chr2 28440322 28440454 -224816129 - L1ME4a LINE L1 -6 6115 5976 1958 124 13 29 chr2 28440924 28441231 -224815352 + AluSx SINE Alu 1 302 -10 500 220 0 25 chr2 28441293 28441411 -224815172 - AluJ SINE Alu 0 312 198 809 136 0 17 chr2 28441423 28441541 -224815042 - AluJ SINE Alu -194 118 3 660 264 50 50 chr2 28441574 28441740 -224814843 - L1ME4a LINE L1 -266 5855 5687 1753 166 0 27 chr2 28441740 28442035 -224814548 + AluJo SINE Alu 1 287 -25 660 264 50 50 chr2 28442035 28442148 -224814435 - L1ME4a LINE L1 -433 5688 5576 344 260 72 28 chr2 28443413 28443549 -224813034 - L1MC4a LINE L1 -1795 6013 5866 216 0 0 0 chr2 28443549 28443573 -224813010 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 344 260 72 28 chr2 28443573 28443617 -224812966 - L1MC4a LINE L1 -1942 5866 5825 357 207 47 38 chr2 28443634 28443740 -224812843 - L1MC4a LINE L1 -409 5753 5668 3161 175 22 2 chr2 28443763 28444307 -224812276 - MER68 LTR ERV1 0 562 8 293 246 14 0 chr2 28444328 28444397 -224812186 - L1MC4a LINE L1 -2226 5582 5513 2243 118 16 3 chr2 28444603 28444909 -224811674 - L1PB3 LINE L1 -12 6142 5833 1473 167 4 16 chr2 28444910 28445168 -224811415 - AluJo SINE Alu -1 311 57 6460 176 21 150 chr2 28445168 28446025 -224810558 - L1 LINE L1 -2204 3942 2976 2021 143 10 3 chr2 28446025 28446325 -224810258 - AluSx SINE Alu -10 302 1 6460 176 21 150 chr2 28446325 28446401 -224810182 - L1 LINE L1 -3170 2976 2892 189 0 0 0 chr2 28446401 28446422 -224810161 + (TC)n Simple_repeat Simple_repeat 2 22 0 850 153 0 0 chr2 28446430 28446548 -224810035 - FLAM_C SINE Alu -25 118 1 6460 176 21 150 chr2 28446548 28447507 -224809076 - L1 LINE L1 -3261 2885 2254 2098 112 18 0 chr2 28447507 28447811 -224808772 - AluSx SINE Alu 0 309 1 6460 176 21 150 chr2 28447811 28448229 -224808354 - L1 LINE L1 -3892 2254 1784 629 202 71 60 chr2 28448416 28448683 -224807900 + L1MC5 LINE L1 7509 7778 -183 383 217 94 83 chr2 28448796 28448957 -224807626 - L1MC/D LINE L1 -478 5643 5497 1648 144 0 34 chr2 28449558 28449848 -224806735 - AluJo SINE Alu 0 309 29 1717 134 29 76 chr2 28449853 28450167 -224806416 - AluJb SINE Alu -11 301 3 328 303 23 68 chr2 28451303 28451435 -224805148 + MIR SINE MIR 81 206 -56 248 170 21 0 chr2 28451493 28451540 -224805043 + MIR3 SINE MIR 113 160 -48 427 190 25 165 chr2 28451540 28451680 -224804903 - MER5B DNA MER1_type 0 178 73 1696 188 7 3 chr2 28451680 28451972 -224804611 - AluJb SINE Alu -17 295 3 427 190 25 165 chr2 28451972 28452031 -224804552 - MER5B DNA MER1_type -105 73 7 876 210 97 0 chr2 28452056 28452251 -224804332 - MER58A DNA MER1_type -10 214 1 688 277 167 53 chr2 28452562 28452623 -224803960 - L2 LINE L2 -543 2771 2718 2402 72 7 0 chr2 28452623 28452915 -224803668 - AluSg SINE Alu -16 294 1 688 277 167 53 chr2 28452915 28453326 -224803257 - L2 LINE L2 -596 2718 2245 23 0 0 0 chr2 28654109 28654132 -224602451 + AT_rich Low_complexity Low_complexity 1 23 0 4921 125 11 28 chr2 28654988 28656123 -224600460 - L1P4 LINE L1 -392 5776 4623 2159 129 0 0 chr2 28656123 28656441 -224600142 - AluSx SINE Alu 0 318 1 1484 204 39 0 chr2 28656444 28656604 -224599979 - AluJb SINE Alu -22 290 113 282 87 0 0 chr2 28656604 28656650 -224599933 + (TTTG)n Simple_repeat Simple_repeat 1 46 0 1484 204 39 0 chr2 28656650 28656768 -224599815 - AluJb SINE Alu -199 113 1 4921 125 11 28 chr2 28656768 28657023 -224599560 - L1P4 LINE L1 -1547 4621 4402 1231 212 0 4 chr2 28657413 28657668 -224598915 - AluJb SINE Alu -54 258 5 1707 140 22 14 chr2 28657734 28658012 -224598571 - AluJo SINE Alu -21 291 12 396 165 10 41 chr2 28658228 28658325 -224598258 - MLT1F LTR MaLR -61 481 388 37 0 0 0 chr2 28658517 28658554 -224598029 + AT_rich Low_complexity Low_complexity 1 37 0 252 237 92 13 chr2 28658587 28658663 -224597920 - L2 LINE L2 -10 3303 3222 1019 238 70 8 chr2 28659616 28659860 -224596723 - MIR SINE MIR 0 262 4 365 273 30 0 chr2 28660807 28660906 -224595677 - L2 LINE L2 -2 3270 3169 202 308 112 37 chr2 28661828 28661935 -224594648 - L2 LINE L2 0 3313 3199 2173 116 0 0 chr2 28662017 28662311 -224594272 + AluSc SINE Alu 1 294 -15 2398 86 0 0 chr2 28662578 28662870 -224593713 + AluSg SINE Alu 1 292 -18 2164 170 14 2 chr2 28663121 28663544 -224593039 + L1 LINE L1 4812 5239 -907 2013 123 3 7 chr2 28664063 28664356 -224592227 - AluSx SINE Alu -20 292 1 222 241 19 0 chr2 28665042 28665096 -224591487 + L2 LINE L2 2550 2604 -710 955 268 69 119 chr2 28665695 28666406 -224590177 + L2 LINE L2 2591 3276 -37 1730 104 25 0 chr2 28666479 28666758 -224589825 - L1MA5A LINE L1 -4 6293 6008 2225 127 0 10 chr2 28667504 28667681 -224588902 - AluSx SINE Alu -1 311 137 2226 95 0 13 chr2 28667681 28667985 -224588598 - AluSc SINE Alu -9 300 1 2225 127 0 10 chr2 28667985 28668121 -224588462 - AluSx SINE Alu -175 137 1 793 120 33 13 chr2 28668257 28668407 -224588176 + L1M2 LINE L1 5318 5470 -830 340 194 28 14 chr2 28668407 28668479 -224588104 - MER2 DNA MER2_type 0 345 273 990 86 39 0 chr2 28668481 28668609 -224587974 + AluSg SINE Alu 1 133 -177 728 113 48 0 chr2 28668621 28668745 -224587838 - MER2 DNA MER2_type -86 259 130 3846 130 4 83 chr2 28668745 28668946 -224587637 - Tigger1 DNA MER2_type 0 2418 2203 6031 32 0 0 chr2 28668946 28669656 -224586927 - L1PA3 LINE L1 -1 6154 5445 3846 130 4 83 chr2 28669656 28669687 -224586896 - Tigger1 DNA MER2_type -215 2203 2171 2194 136 0 3 chr2 28669687 28669996 -224586587 + AluSx SINE Alu 1 308 -4 3846 130 4 83 chr2 28669996 28670549 -224586034 - Tigger1 DNA MER2_type -247 2171 1694 * 6577 132 64 55 chr2 28670526 28671879 -224584704 - Tigger1 DNA MER2_type -1053 1365 1 532 191 200 0 chr2 28671879 28671988 -224584595 - MER2 DNA MER2_type -214 131 1 798 142 39 0 chr2 28672010 28672137 -224584446 + FLAM_A SINE Alu 2 133 0 1792 99 17 0 chr2 28672144 28672377 -224584206 + AluSc SINE Alu 1 237 -72 281 169 17 0 chr2 28672377 28672436 -224584147 + (TA)n Simple_repeat Simple_repeat 2 61 0 348 304 51 88 chr2 28673738 28673955 -224582628 + HAL1 LINE L1 1684 1892 -615 253 286 94 21 chr2 28674331 28674523 -224582060 + HAL1 LINE L1 2165 2370 -137 21 57 0 0 chr2 28674657 28674692 -224581891 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr2 28674724 28674746 -224581837 + AT_rich Low_complexity Low_complexity 1 22 0 2394 103 5 46 chr2 28675157 28675574 -224581009 + L1PA13 LINE L1 5759 6158 -5 388 91 0 0 chr2 28675575 28675630 -224580953 + MSTB2 LTR MaLR 403 457 0 2535 60 0 0 chr2 28675665 28675966 -224580617 - AluY SINE Alu -10 301 1 189 220 20 40 chr2 28676067 28676117 -224580466 - MIR SINE MIR -105 157 109 898 141 0 22 chr2 28676193 28676328 -224580255 - FLAM_C SINE Alu -1 132 1 1731 152 20 10 chr2 28676718 28677015 -224579568 - AluJb SINE Alu -12 300 1 1265 259 211 15 chr2 28677398 28678340 -224578243 + L2 LINE L2 2176 3311 -2 879 123 8 0 chr2 28679060 28679190 -224577393 + FLAM_C SINE Alu 1 131 -2 27 0 0 0 chr2 28679193 28679220 -224577363 + AT_rich Low_complexity Low_complexity 1 27 0 353 242 109 32 chr2 28679285 28679416 -224577167 + MIR SINE MIR 70 208 0 2028 183 57 28 chr2 28679463 28679933 -224576650 + MLT1D LTR MaLR 22 505 0 305 279 38 0 chr2 28680317 28680396 -224576187 + MIR3 SINE MIR 109 190 -18 2141 113 3 0 chr2 28680586 28680894 -224575689 - AluSq SINE Alu 0 309 1 672 196 243 0 chr2 28681173 28681346 -224575237 + MER58C DNA MER1_type 1 215 0 229 132 0 0 chr2 28681948 28681986 -224574597 + L1ME4a LINE L1 6080 6117 -4 285 119 0 0 chr2 28682312 28682354 -224574229 - MIR SINE MIR -66 196 155 1555 261 76 9 chr2 28684940 28685587 -224570996 + L1M4 LINE L1 3851 4540 -1606 1742 161 4 7 chr2 28685593 28685867 -224570716 + AluJb SINE Alu 1 273 -39 2243 124 54 94 chr2 28686002 28686500 -224570083 + L1MB3 LINE L1 5706 6183 0 410 250 49 24 chr2 28686492 28686656 -224569927 + L1M4 LINE L1 4699 4866 -1280 * 248 175 18 0 chr2 28686657 28686714 -224569869 + Charlie7 DNA MER1_type 2165 2222 -390 25 75 0 0 chr2 28686789 28686842 -224569741 + AT_rich Low_complexity Low_complexity 1 53 0 2014 153 33 19 chr2 28686880 28687240 -224569343 + MLT1A1 LTR MaLR 1 365 0 2225 97 10 3 chr2 28687267 28687566 -224569017 + AluSc SINE Alu 1 301 -8 203 361 135 0 chr2 28687757 28687890 -224568693 - L2 LINE L2 -167 3105 2955 207 282 11 55 chr2 28688639 28688820 -224567763 + GA-rich Low_complexity Low_complexity 4 176 0 598 229 33 33 chr2 28689098 28689251 -224567332 + MIR SINE MIR 89 241 -21 284 262 114 13 chr2 28689800 28689949 -224566634 + MER112 DNA MER1_type 78 241 -19 873 319 150 12 chr2 28689984 28690492 -224566091 + L3 LINE CR1 997 1574 -3 970 158 124 13 chr2 28691241 28691475 -224565108 + MER5C DNA MER1_type 3 262 -62 1157 168 92 27 chr2 28692455 28692717 -224563866 - LTR35 LTR ERV1 -339 279 1 241 273 7 58 chr2 28693044 28693183 -224563400 + CT-rich Low_complexity Low_complexity 4 135 0 1468 214 36 78 chr2 28693267 28693354 -224563229 + L1ME3A LINE L1 5659 5748 -422 2714 93 11 11 chr2 28693354 28693729 -224562854 - THE1C LTR MaLR 0 375 1 1468 214 36 78 chr2 28693729 28694170 -224562413 + L1ME3A LINE L1 5748 6165 -5 288 281 141 47 chr2 28694351 28694479 -224562104 - L2 LINE L2 -38 3234 3095 256 310 0 0 chr2 28694530 28694588 -224561995 + MIR SINE MIR 79 136 -72 1360 155 32 79 chr2 28695023 28695250 -224561333 + L1MB3 LINE L1 5160 5353 -827 1927 157 0 7 chr2 28695250 28695550 -224561033 + AluJo SINE Alu 15 312 0 1360 155 32 79 chr2 28695550 28695767 -224560816 + L1MB3 LINE L1 5353 5579 -601 2144 111 0 88 chr2 28695772 28696009 -224560574 + L1PA16 LINE L1 5804 5995 -171 1509 164 20 37 chr2 28696009 28696307 -224560276 + AluJb SINE Alu 1 293 -19 2144 111 0 88 chr2 28696307 28696457 -224560126 + L1PA16 LINE L1 5995 6157 -9 2994 135 49 14 chr2 28696476 28697067 -224559516 + L1MB3 LINE L1 5571 6182 -1 22 56 0 0 chr2 28697117 28697153 -224559430 + AT_rich Low_complexity Low_complexity 1 36 0 245 250 32 16 chr2 28697639 28697763 -224558820 + (CGCGG)n Simple_repeat Simple_repeat 2 127 0 184 278 206 41 chr2 28699119 28699216 -224557367 + MIR SINE MIR 30 142 -66 194 308 64 0 chr2 28699629 28699707 -224556876 + MIR SINE MIR 129 211 -51 285 250 14 14 chr2 28700543 28700615 -224555968 - L2 LINE L2 0 3313 3242 2462 82 0 0 chr2 28700706 28701009 -224555574 + AluSc SINE Alu 1 303 -6 3006 202 61 18 chr2 28702201 28703034 -224553549 - L1MC4a LINE L1 -126 7682 6814 232 258 15 30 chr2 28704389 28704455 -224552128 - L2 LINE L2 -1 3312 3248 256 330 62 0 chr2 28705414 28705511 -224551072 + MIR3 SINE MIR 82 184 -24 2211 165 46 0 chr2 28705524 28705955 -224550628 + L1MB7 LINE L1 5734 6184 0 891 150 0 0 chr2 28705975 28706108 -224550475 + FLAM_A SINE Alu 1 133 0 2050 97 31 3 chr2 28706469 28706759 -224549824 - AluSq SINE Alu -15 298 1 2628 52 0 0 chr2 28707754 28708060 -224548523 + AluY SINE Alu 1 306 -5 303 119 0 0 chr2 28708696 28708738 -224547845 + 5S rRNA rRNA 1 42 -79 420 284 59 35 chr2 28708877 28709131 -224547452 - L1ME2 LINE L1 -212 5952 5693 695 204 136 9 chr2 28709178 28709398 -224547185 - MER112 DNA MER1_type -10 250 3 529 289 132 5 chr2 28709404 28709601 -224546982 - L1ME2 LINE L1 -2159 5649 5428 670 297 118 38 chr2 28709607 28709878 -224546705 - L1ME2 LINE L1 -755 5391 5143 264 100 0 0 chr2 28709878 28709918 -224546665 + (TG)n Simple_repeat Simple_repeat 1 40 0 240 35 0 0 chr2 28709917 28709946 -224546637 + (GA)n Simple_repeat Simple_repeat 1 29 0 * 670 297 118 38 chr2 28709918 28710333 -224546250 - L1ME2 LINE L1 -1003 5143 4680 225 321 83 9 chr2 28710449 28710558 -224546025 - L2 LINE L2 -198 3115 2999 3890 143 35 50 chr2 28710563 28711303 -224545280 - MER44D DNA MER2_type -3 602 2 755 271 123 22 chr2 28711405 28711722 -224544861 + HAL1 LINE L1 679 1027 -1480 610 233 48 0 chr2 28711736 28711882 -224544701 + HAL1 LINE L1 1587 1739 -768 258 292 15 0 chr2 28711900 28711965 -224544618 + HAL1 LINE L1 1814 1879 -628 647 304 64 5 chr2 28712304 28712524 -224544059 + MIR SINE MIR 2 234 -28 472 315 18 0 chr2 28712723 28712888 -224543695 + MARNA DNA Mariner 62 229 -357 1742 163 10 16 chr2 28713110 28713416 -224543167 + AluJb SINE Alu 1 304 -8 275 254 99 18 chr2 28714588 28714800 -224541783 - MER102b DNA MER1_type 0 341 46 5700 151 77 2 chr2 28715135 28716156 -224540427 - L1P LINE L1 -1752 4394 3297 1400 206 57 34 chr2 28716156 28716505 -224540078 - MSTD LTR MaLR -39 357 1 324 353 158 16 chr2 28716505 28716695 -224539888 - L2 LINE L2 -97 3175 2959 191 344 33 22 chr2 28716827 28716917 -224539666 - L2 LINE L2 -504 2810 2720 7191 29 1 1 chr2 28716922 28717773 -224538810 + L1PA3 LINE L1 5305 6155 0 274 360 17 67 chr2 28718584 28718762 -224537821 - MIR3 SINE MIR -6 202 34 1643 151 33 3 chr2 28718972 28719271 -224537312 - L1MB3 LINE L1 -19 6164 5857 342 212 257 0 chr2 28719279 28719392 -224537191 + L1MEc LINE L1 1116 1257 -5139 * 2146 127 65 3 chr2 28719387 28719742 -224536841 - L1MB3 LINE L1 -245 5938 5562 642 263 126 52 chr2 28720023 28720217 -224536366 - L1MB3 LINE L1 -297 5824 5646 1752 185 0 16 chr2 28720217 28720530 -224536053 - AluJb SINE Alu -4 308 1 642 263 126 52 chr2 28720530 28720788 -224535795 - L1MB3 LINE L1 -475 5646 5313 311 301 18 44 chr2 28720956 28721069 -224535514 + MER5B DNA MER1_type 63 172 -6 192 290 230 0 chr2 28721419 28721519 -224535064 + L2 LINE L2 3190 3312 -1 206 291 0 0 chr2 28722396 28722451 -224534132 + L2 LINE L2 3216 3270 -2 340 358 11 16 chr2 28723001 28723188 -224533395 - L1M4 LINE L1 -3552 2594 2409 241 222 10 30 chr2 28723285 28723384 -224533199 - L1M4 LINE L1 -3794 2352 2256 25 0 0 0 chr2 28723426 28723451 -224533132 + AT_rich Low_complexity Low_complexity 1 25 0 19845 85 23 4 chr2 28723598 28724505 -224532078 + Charlie3 DNA MER1_type 1 889 -1817 219 36 0 0 chr2 28724505 28724533 -224532050 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 19845 85 23 4 chr2 28724533 28726280 -224530303 + Charlie3 DNA MER1_type 889 2706 0 23 86 0 0 chr2 28726561 28726619 -224529964 + AT_rich Low_complexity Low_complexity 1 58 0 846 288 4 13 chr2 28726664 28726897 -224529686 + MIR SINE MIR 32 262 0 276 354 18 18 chr2 28726932 28727045 -224529538 - L2 LINE L2 -226 3046 2934 241 307 80 33 chr2 28727312 28727462 -224529121 + MIR SINE MIR 7 163 -99 21 0 0 0 chr2 28727543 28727564 -224529019 + AT_rich Low_complexity Low_complexity 1 21 0 3019 237 83 31 chr2 28728552 28728677 -224527906 + L1MEc LINE L1 800 917 -5479 2077 149 0 0 chr2 28728677 28728973 -224527610 - AluJo SINE Alu -16 296 1 3019 237 83 31 chr2 28728973 28730057 -224526526 + L1MEc LINE L1 917 2072 -4324 754 164 8 22 chr2 28730082 28730216 -224526367 + FLAM_C SINE Alu 2 133 0 2344 61 0 0 chr2 28730449 28730757 -224525826 - AluY SINE Alu 0 308 1 374 177 0 0 chr2 28731176 28731238 -224525345 - L2 LINE L2 -250 3063 3002 1875 135 15 7 chr2 28731489 28731763 -224524820 + AluJo SINE Alu 17 292 -20 222 296 62 0 chr2 28732377 28732458 -224524125 - MIR SINE MIR -108 154 69 1797 152 17 10 chr2 28733546 28733848 -224522735 + AluJb SINE Alu 1 304 -8 1725 148 30 11 chr2 28733851 28734121 -224522462 + AluSg SINE Alu 1 275 -35 211 151 19 57 chr2 28734504 28734528 -224522055 + (CAGAGA)n Simple_repeat Simple_repeat 2 25 -27 2196 120 0 0 chr2 28734528 28734828 -224521755 + AluSx SINE Alu 1 300 -12 211 151 19 57 chr2 28734828 28734856 -224521727 + (CAGAGA)n Simple_repeat Simple_repeat 25 52 0 302 292 100 46 chr2 28734867 28734997 -224521586 - L2 LINE L2 0 3272 3136 2111 91 28 3 chr2 28735506 28735792 -224520791 + AluSg SINE Alu 1 293 -17 22 0 0 0 chr2 28736029 28736051 -224520532 + AT_rich Low_complexity Low_complexity 1 22 0 1592 171 7 31 chr2 28736573 28736891 -224519692 - AluJb SINE Alu 0 311 1 1362 158 108 23 chr2 28737015 28737314 -224519269 - AluJb SINE Alu 0 321 1 26 0 0 0 chr2 28738224 28738250 -224518333 + AT_rich Low_complexity Low_complexity 1 26 0 2520 205 46 34 chr2 28738443 28739120 -224517463 - L1ME1 LINE L1 -4 6231 5547 1748 134 0 103 chr2 28739223 28739552 -224517031 - AluJb SINE Alu -17 295 1 3684 230 67 82 chr2 28739579 28741330 -224515253 - L1ME1 LINE L1 -1291 4924 3199 788 210 64 72 chr2 28741341 28741731 -224514852 - L1ME1 LINE L1 -3961 2254 1900 1636 217 59 33 chr2 28741734 28742712 -224513871 - L1M4 LINE L1 -789 5357 4106 2319 107 0 0 chr2 28742712 28743011 -224513572 + AluSx SINE Alu 1 299 -13 1636 217 59 33 chr2 28743011 28743172 -224513411 - L1M4 LINE L1 -2040 4106 3951 2286 84 10 3 chr2 28743474 28743773 -224512810 + AluSx SINE Alu 1 301 -11 4497 211 86 80 chr2 28744575 28745927 -224510656 - L1M4 LINE L1 -2196 3950 2583 935 103 0 14 chr2 28745927 28746073 -224510510 - L1PB1 LINE L1 -1 6150 6007 4497 211 86 80 chr2 28746073 28746547 -224510036 - L1M4 LINE L1 -3563 2583 2113 1526 168 103 0 chr2 28747253 28747396 -224509187 - AluJo SINE Alu -23 289 162 1688 164 0 13 chr2 28747396 28747694 -224508889 - AluJo SINE Alu -9 303 10 1526 168 103 0 chr2 28747694 28747812 -224508771 - AluJo SINE Alu -150 162 1 22 56 0 0 chr2 28748956 28748992 -224507591 + AT_rich Low_complexity Low_complexity 1 36 0 210 225 0 0 chr2 28750746 28750786 -224505797 + L2 LINE L2 3231 3270 -2 254 412 91 3 chr2 28750828 28751158 -224505425 + L3 LINE CR1 96 454 -1123 1585 243 101 87 chr2 28751876 28752461 -224504122 + MLT1H1 LTR MaLR 1 553 -2 496 181 16 0 chr2 28752677 28752804 -224503779 + (TA)n Simple_repeat Simple_repeat 2 130 0 25 0 0 0 chr2 28752808 28752833 -224503750 + AT_rich Low_complexity Low_complexity 1 25 0 353 312 85 30 chr2 28754834 28755033 -224501550 - MIR SINE MIR -40 222 13 2383 114 16 19 chr2 28755473 28755840 -224500743 + MER47A DNA MER2_type 1 366 0 1995 160 0 7 chr2 28755943 28756250 -224500333 - AluJo SINE Alu -7 305 1 1436 202 30 14 chr2 28756322 28756619 -224499964 - AluJo SINE Alu -8 304 3 2298 115 0 0 chr2 28757408 28757720 -224498863 + AluSx SINE Alu 1 312 0 966 324 180 57 chr2 28757792 28758197 -224498386 + L3 LINE CR1 320 673 -904 1387 181 169 49 chr2 28758197 28758605 -224497978 + MSTB2 LTR MaLR 1 457 0 966 324 180 57 chr2 28758605 28759241 -224497342 + L3 LINE CR1 673 1490 -87 287 225 45 34 chr2 28759329 28759418 -224497165 - MER94 DNA DNA -43 91 2 1017 218 36 27 chr2 28759549 28759880 -224496703 - L1MC5 LINE L1 -34 7927 7594 222 196 43 0 chr2 28759880 28759926 -224496657 + (CATA)n Simple_repeat Simple_repeat 1 48 0 194 229 14 0 chr2 28760026 28760096 -224496487 + CT-rich Low_complexity Low_complexity 3 73 0 1592 195 67 69 chr2 28760139 28760839 -224495744 - L1MC5 LINE L1 -466 7495 6766 249 261 29 0 chr2 28761319 28761388 -224495195 - LTR16C LTR ERVL 0 491 421 1998 125 50 39 chr2 28761389 28761749 -224494834 + THE1B LTR MaLR 1 364 0 10279 84 104 1 chr2 28761749 28763181 -224493402 + THE1B-int LTR MaLR 1 1580 0 2254 112 48 28 chr2 28763181 28763538 -224493045 + THE1B LTR MaLR 1 364 0 588 338 110 0 chr2 28763538 28763846 -224492737 - LTR16C LTR ERVL -67 424 83 952 218 0 33 chr2 28763913 28764124 -224492459 + MER20 DNA MER1_type 16 219 0 1294 260 45 69 chr2 28764725 28765417 -224491166 - L1MC4 LINE L1 -148 7894 7220 660 309 92 20 chr2 28766383 28766678 -224489905 + L3 LINE CR1 1161 1476 -101 1076 161 33 5 chr2 28766739 28766950 -224489633 + MER33 DNA MER1_type 1 217 -107 27 0 0 0 chr2 28766963 28766990 -224489593 + AT_rich Low_complexity Low_complexity 1 27 0 2153 103 10 3 chr2 28766992 28767284 -224489299 - AluSx SINE Alu -16 296 3 245 202 105 81 chr2 28767845 28767969 -224488614 + L1ME1 LINE L1 316 442 -5628 5633 231 50 51 chr2 28768134 28770930 -224485653 + L1ME1 LINE L1 3293 6080 -20 437 158 33 17 chr2 28770930 28771050 -224485533 + MER33 DNA MER1_type 203 324 0 1319 314 64 37 chr2 28771510 28772215 -224484368 + L3 LINE CR1 674 1397 -180 2431 150 36 7 chr2 28772260 28772674 -224483909 + MSTB LTR MaLR 1 426 0 5071 113 7 16 chr2 28772850 28773239 -224483344 - L1PA15 LINE L1 0 6165 5785 2213 121 0 19 chr2 28773239 28773553 -224483030 - AluSx SINE Alu -4 308 1 5071 113 7 16 chr2 28773553 28773936 -224482647 - L1PA15 LINE L1 -380 5785 5400 21 36 0 0 chr2 28774953 28774981 -224481602 + AT_rich Low_complexity Low_complexity 1 28 0 1256 151 37 0 chr2 28775014 28775259 -224481324 + L1MA4 LINE L1 6038 6291 -9 4587 160 37 18 chr2 28775563 28776816 -224479767 - L1MB7 LINE L1 -10 6174 4899 429 97 28 0 chr2 28776831 28776903 -224479680 - L1MB2 LINE L1 -4 6167 6094 2236 184 45 12 chr2 28776918 28777065 -224479518 - L1MB2 LINE L1 -228 5943 5802 351 0 0 0 chr2 28777065 28777104 -224479479 + (CA)n Simple_repeat Simple_repeat 2 40 0 2236 184 45 12 chr2 28777104 28777440 -224479143 - L1MB2 LINE L1 -369 5802 5444 * 2945 239 26 11 chr2 28777436 28778249 -224478334 - L1MB7 LINE L1 -1237 4909 4085 33 25 0 0 chr2 28778845 28778885 -224477698 + AT_rich Low_complexity Low_complexity 1 40 0 5588 78 14 1 chr2 28778920 28779278 -224477305 - L1PB1 LINE L1 -1 6150 5798 369 0 0 0 chr2 28779278 28779319 -224477264 + (TG)n Simple_repeat Simple_repeat 2 42 0 5588 78 14 1 chr2 28779319 28779728 -224476855 - L1PB1 LINE L1 -353 5798 5373 581 257 67 26 chr2 28781277 28781501 -224475082 - MIR SINE MIR -16 246 20 1926 170 0 0 chr2 28781754 28782054 -224474529 + AluJb SINE Alu 1 300 -12 22 0 0 0 chr2 28783326 28783348 -224473235 + AT_rich Low_complexity Low_complexity 1 22 0 186 376 92 9 chr2 28783549 28783658 -224472925 - L2 LINE L2 -218 3054 2937 237 288 38 12 chr2 28784088 28784168 -224472415 - MIR3 SINE MIR -14 194 113 31 26 0 0 chr2 28784926 28784964 -224471619 + AT_rich Low_complexity Low_complexity 1 38 0 25 51 0 0 chr2 28785025 28785064 -224471519 + AT_rich Low_complexity Low_complexity 1 39 0 267 324 0 14 chr2 28785323 28785394 -224471189 - MER5A DNA MER1_type 0 189 120 214 313 144 62 chr2 28785325 28785485 -224471098 + MER5A DNA MER1_type 17 189 0 * 4100 156 68 43 chr2 28785592 28786484 -224470099 - L1MB7 LINE L1 0 6184 5270 1110 283 67 59 chr2 28786937 28787308 -224469275 + L2 LINE L2 2816 3193 -120 500 236 18 0 chr2 28787308 28787418 -224469165 + MER81 DNA DNA 2 113 -1 1110 283 67 59 chr2 28787418 28787540 -224469043 + L2 LINE L2 3193 3313 0 1910 218 65 17 chr2 28788543 28789067 -224467516 - L1ME3A LINE L1 -11 6159 5611 539 248 242 28 chr2 28789107 28789731 -224466852 - LTR41 LTR ERVL -2 793 1 407 333 69 43 chr2 28789749 28789794 -224466789 - L1ME LINE L1 -5110 960 918 2363 85 0 3 chr2 28789794 28790101 -224466482 - AluY SINE Alu -5 306 1 407 333 69 43 chr2 28790101 28790446 -224466137 - L1ME LINE L1 -5152 918 560 21 0 0 0 chr2 28791199 28791220 -224465363 + AT_rich Low_complexity Low_complexity 1 21 0 32 81 0 0 chr2 28791299 28791373 -224465210 + AT_rich Low_complexity Low_complexity 1 74 0 2152 116 0 0 chr2 28792094 28792386 -224464197 + AluSg SINE Alu 1 292 -18 31 26 0 0 chr2 28792512 28792550 -224464033 + AT_rich Low_complexity Low_complexity 1 38 0 191 389 40 32 chr2 28793266 28793392 -224463191 + L2 LINE L2 3108 3234 -38 264 343 76 19 chr2 28793506 28793716 -224462867 - L2 LINE L2 -226 3046 2825 6284 147 50 38 chr2 28794191 28795453 -224461130 - L1MC3 LINE L1 -8 7777 6501 268 295 13 0 chr2 28795529 28795607 -224460976 - L2 LINE L2 -1 3312 3234 203 327 46 26 chr2 28795621 28795747 -224460836 - L2 LINE L2 0 3313 3093 2364 159 68 5 chr2 28795767 28796162 -224460421 - MSTB LTR MaLR -6 420 1 488 253 18 35 chr2 28796227 28796397 -224460186 - MLT1K LTR MaLR 0 588 422 661 269 81 15 chr2 28796777 28797111 -224459472 + L1MEc LINE L1 1346 1701 -4695 342 276 0 48 chr2 28797506 28797611 -224458972 - MER5B DNA MER1_type -37 141 42 1293 164 14 0 chr2 28797618 28797831 -224458752 + AluJb SINE Alu 87 302 -10 713 169 97 19 chr2 28798911 28799065 -224457518 - AluJb SINE Alu -11 301 136 21 36 0 0 chr2 28799351 28799379 -224457204 + AT_rich Low_complexity Low_complexity 1 28 0 688 221 59 37 chr2 28799981 28800252 -224456331 - L1MC5 LINE L1 -82 7879 7603 708 189 60 37 chr2 28800258 28800475 -224456108 - L1MC5 LINE L1 -407 7554 7333 24 32 0 0 chr2 28801193 28801224 -224455359 + AT_rich Low_complexity Low_complexity 1 31 0 206 333 17 0 chr2 28801460 28801577 -224455006 + (TA)n Simple_repeat Simple_repeat 1 119 0 188 398 55 16 chr2 28802226 28802354 -224454229 - L2 LINE L2 -2 3270 3138 225 183 0 141 chr2 28802595 28802666 -224453917 - Charlie8 DNA MER1_type -989 1428 1368 262 305 29 29 chr2 28803424 28803529 -224453054 + MER5A DNA MER1_type 65 169 -9 28 0 0 0 chr2 28803627 28803655 -224452928 + AT_rich Low_complexity Low_complexity 1 28 0 689 279 71 75 chr2 28804854 28805416 -224451167 - MLT1K LTR MaLR -27 561 2 207 0 0 0 chr2 28807887 28807910 -224448673 + (A)n Simple_repeat Simple_repeat 1 23 0 324 0 0 0 chr2 28807916 28807952 -224448631 + (CA)n Simple_repeat Simple_repeat 2 37 0 195 129 0 0 chr2 28808811 28808842 -224447741 + (T)n Simple_repeat Simple_repeat 1 31 0 285 281 10 10 chr2 28809998 28810094 -224446489 + CT-rich Low_complexity Low_complexity 2 97 0 281 284 0 0 chr2 28811174 28811241 -224445342 + L3 LINE CR1 1247 1313 -264 2135 169 52 12 chr2 28811726 28812206 -224444377 - L1MB8 LINE L1 -1 6177 5679 5312 134 20 38 chr2 28812219 28813068 -224443515 - L1PB1 LINE L1 0 6151 5331 3706 79 0 0 chr2 28813068 28813549 -224443034 - L1PA8 LINE L1 -13 6159 5679 5312 134 20 38 chr2 28813549 28814190 -224442393 - L1PB1 LINE L1 -820 5331 4680 366 294 99 64 chr2 28814622 28814935 -224441648 - L1ME4a LINE L1 -23 6098 5775 264 271 54 60 chr2 28814996 28815162 -224441421 - L1ME4a LINE L1 -362 5759 5595 351 0 0 0 chr2 28815175 28815214 -224441369 + (CA)n Simple_repeat Simple_repeat 2 40 0 21 0 0 0 chr2 28817420 28817441 -224439142 + AT_rich Low_complexity Low_complexity 1 21 0 2261 202 37 26 chr2 28818070 28818345 -224438238 + Charlie1a DNA MER1_type 5 275 -2486 2582 27 0 7 chr2 28818345 28818642 -224437941 + AluY SINE Alu 1 295 -16 2261 202 37 26 chr2 28818642 28818910 -224437673 + Charlie1a DNA MER1_type 275 554 -901 21 0 0 0 chr2 28819085 28819106 -224437477 + AT_rich Low_complexity Low_complexity 1 21 0 347 301 82 7 chr2 28819829 28819975 -224436608 - MER5A DNA MER1_type -31 158 2 21 57 0 0 chr2 28820986 28821021 -224435562 + AT_rich Low_complexity Low_complexity 1 35 0 358 255 121 13 chr2 28821122 28821271 -224435312 + MIR SINE MIR 77 241 -21 1689 183 26 10 chr2 28821762 28822068 -224434515 + AluJb SINE Alu 1 311 -1 207 193 23 45 chr2 28822899 28822987 -224433596 + (TTATA)n Simple_repeat Simple_repeat 2 87 0 22 35 0 0 chr2 28823177 28823206 -224433377 + AT_rich Low_complexity Low_complexity 1 29 0 2151 51 0 0 chr2 28823404 28823658 -224432925 - AluY SINE Alu -14 297 44 2490 226 149 12 chr2 28823674 28824414 -224432169 + L2 LINE L2 1706 2546 -768 496 153 0 0 chr2 28825023 28825095 -224431488 - FLAM_A SINE Alu -54 88 17 2119 86 0 7 chr2 28825234 28825503 -224431080 - AluY SINE Alu -44 267 1 21 36 0 0 chr2 28825605 28825633 -224430950 + AT_rich Low_complexity Low_complexity 1 28 0 196 252 130 16 chr2 28825700 28825823 -224430760 - L2 LINE L2 -144 3169 3033 2198 102 0 3 chr2 28826499 28826794 -224429789 - AluSq SINE Alu -17 296 3 337 301 7 98 chr2 28827170 28827323 -224429260 + MIR3 SINE MIR 2 140 -68 2518 76 0 0 chr2 28827537 28827840 -224428743 - AluY SINE Alu -8 303 1 205 260 60 0 chr2 28827899 28827949 -224428634 + MIR3 SINE MIR 149 201 -7 666 144 30 66 chr2 28828209 28828376 -224428207 - L1MB3 LINE L1 0 6183 6023 222 274 83 12 chr2 28829010 28829094 -224427489 + MIR SINE MIR 60 149 -113 313 348 22 38 chr2 28829575 28829759 -224426824 + L2 LINE L2 2217 2397 -917 1604 164 7 41 chr2 28829910 28830227 -224426356 - AluJb SINE Alu 0 307 1 22 106 0 0 chr2 28830243 28830328 -224426255 + AT_rich Low_complexity Low_complexity 1 85 0 279 79 0 0 chr2 28830618 28830656 -224425927 + (CA)n Simple_repeat Simple_repeat 1 38 0 204 40 0 0 chr2 28830655 28830680 -224425903 + (GA)n Simple_repeat Simple_repeat 2 26 0 * 1213 184 5 22 chr2 28831756 28831979 -224424604 + MER20 DNA MER1_type 1 219 0 420 208 0 0 chr2 28832150 28832251 -224424332 + (TA)n Simple_repeat Simple_repeat 2 102 0 1018 92 10 146 chr2 28832821 28833027 -224423556 + AluSp SINE Alu 136 313 0 1702 116 0 21 chr2 28833034 28833275 -224423308 + AluSc SINE Alu 71 306 -3 270 261 14 0 chr2 28833275 28833344 -224423239 - L1MEd LINE L1 -6037 82 13 469 288 96 0 chr2 28833517 28833663 -224422920 + L2 LINE L2 2580 2739 -575 453 247 43 19 chr2 28834055 28834215 -224422368 + L1MC3 LINE L1 5983 6146 -20 987 206 70 58 chr2 28834394 28834738 -224421845 - L1MC5 LINE L1 -865 7096 6749 881 204 0 0 chr2 28834755 28834902 -224421681 - FRAM SINE Alu -17 159 13 1616 103 0 0 chr2 28834906 28835110 -224421473 - AluSc SINE Alu -15 294 91 2551 54 0 0 chr2 28835118 28835414 -224421169 - AluY SINE Alu -15 296 1 330 280 34 17 chr2 28835416 28835534 -224421049 - L1MC4a LINE L1 -1075 6733 6614 367 233 93 13 chr2 28835552 28835702 -224420881 - L1MC5 LINE L1 -46 7915 7754 1770 181 0 10 chr2 28835943 28836231 -224420352 + AluJo SINE Alu 2 286 -26 547 198 0 9 chr2 28836658 28836774 -224419809 + L1M4 LINE L1 4834 4948 -1198 2550 77 0 0 chr2 28836784 28837095 -224419488 + AluY SINE Alu 1 311 0 201 167 0 0 chr2 28837122 28837158 -224419425 + (TA)n Simple_repeat Simple_repeat 2 37 0 422 177 21 0 chr2 28837162 28837258 -224419325 + L1M4 LINE L1 4976 5073 -1073 327 248 120 0 chr2 28837262 28837387 -224419196 + Charlie1 DNA MER1_type 2622 2761 0 2247 115 3 0 chr2 28837457 28837761 -224418822 + AluSx SINE Alu 1 305 -7 2230 101 7 3 chr2 28837764 28838070 -224418513 + AluSc SINE Alu 1 307 -2 334 266 176 75 chr2 28838436 28838747 -224417836 + MLT1K LTR MaLR 11 370 -218 1311 205 28 6 chr2 28838747 28839064 -224417519 - MER33 DNA MER1_type 0 324 1 334 266 176 75 chr2 28839064 28839139 -224417444 + MLT1K LTR MaLR 370 436 -152 1726 134 19 0 chr2 28839321 28839628 -224416955 - L1MB8 LINE L1 -189 5989 5677 1089 247 141 37 chr2 28839759 28840220 -224416363 - MLT1E LTR MaLR 0 593 85 490 255 21 21 chr2 28840327 28840468 -224416115 + L2 LINE L2 3158 3298 -15 195 42 0 0 chr2 28840469 28840493 -224416090 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 2380 113 0 0 chr2 28840597 28840907 -224415676 - AluSx SINE Alu -2 310 1 3476 146 43 0 chr2 28841060 28841670 -224414913 - L1MB2 LINE L1 -14 6157 5522 216 306 0 0 chr2 28841868 28841917 -224414666 - L3 LINE CR1 -1328 249 201 317 299 15 0 chr2 28842787 28842921 -224413662 - L1MEc LINE L1 -4950 1446 1311 734 96 0 10 chr2 28845451 28845555 -224411028 - AluSp SINE Alu -210 103 1 2128 67 15 0 chr2 28845719 28846027 -224410556 - AluY SINE Alu 0 325 14 387 0 0 0 chr2 28846162 28846205 -224410378 + (TG)n Simple_repeat Simple_repeat 2 44 0 202 374 0 22 chr2 28846308 28846399 -224410184 + L2 LINE L2 3225 3313 0 2317 108 3 0 chr2 28847054 28847396 -224409187 - L1PA7 LINE L1 -1844 4302 3960 7020 71 35 1 chr2 28847398 28849161 -224407422 + L1PA7 LINE L1 4313 6135 -19 554 102 0 11 chr2 28849161 28849249 -224407334 + (GGAA)n Simple_repeat Simple_repeat 2 88 0 403 37 0 0 chr2 28849349 28849403 -224407180 + AluSp/q SINE Alu 247 300 -13 4453 86 5 7 chr2 28851425 28852471 -224404112 - L1PA8A LINE L1 -411 5720 4676 611 263 198 9 chr2 28853713 28853930 -224402653 + MIR SINE MIR 5 262 0 1113 236 59 34 chr2 28854765 28855206 -224401377 - L1M4 LINE L1 -1626 4520 4069 237 229 0 99 chr2 28855206 28855337 -224401246 - L1M4 LINE L1 -2346 3800 3683 261 314 36 71 chr2 28855800 28855940 -224400643 - MIR3 SINE MIR -17 191 57 310 297 65 33 chr2 28856413 28856563 -224400020 - MIR SINE MIR -62 146 40 2154 99 3 0 chr2 28856820 28857104 -224399479 + AluSc SINE Alu 2 286 -23 29 28 0 0 chr2 28857376 28857412 -224399171 + AT_rich Low_complexity Low_complexity 1 36 0 318 235 83 36 chr2 28857650 28857780 -224398803 + MIR SINE MIR 31 164 -65 272 301 65 0 chr2 28858342 28858435 -224398148 - L2 LINE L2 -16 3297 3199 804 175 78 6 chr2 28858607 28858773 -224397810 - MER5B DNA MER1_type 0 178 1 2205 102 7 3 chr2 28859411 28859704 -224396879 + AluSx SINE Alu 1 294 -18 557 260 122 29 chr2 28859795 28860119 -224396464 - L1MCb LINE L1 -5791 254 46 328 277 0 84 chr2 28860822 28860941 -224395642 - MIR SINE MIR -134 128 20 2410 80 0 3 chr2 28861658 28861958 -224394625 + AluSx SINE Alu 3 301 -11 265 267 130 23 chr2 28862470 28862601 -224393982 + L1ME3A LINE L1 6018 6162 -8 2166 105 0 66 chr2 28862795 28863129 -224393454 + AluSx SINE Alu 1 312 0 25 0 0 0 chr2 28863314 28863339 -224393244 + AT_rich Low_complexity Low_complexity 1 25 0 2090 211 143 2 chr2 28863381 28863869 -224392714 - MLT1F1 LTR MaLR 0 567 11 2055 96 57 0 chr2 28863888 28864168 -224392415 - AluSq SINE Alu -17 296 1 203 184 0 0 chr2 28864200 28864238 -224392345 + (TAGA)n Simple_repeat Simple_repeat 1 38 0 181 279 35 35 chr2 28864458 28864544 -224392039 - L2 LINE L2 -310 2962 2877 193 317 79 30 chr2 28864754 28864855 -224391728 + L2 LINE L2 3193 3298 -15 26 50 0 0 chr2 28864865 28864905 -224391678 + AT_rich Low_complexity Low_complexity 1 40 0 340 153 0 34 chr2 28866243 28866302 -224390281 - L2 LINE L2 -1 3312 3256 412 234 71 35 chr2 28866639 28866780 -224389803 + MIR SINE MIR 116 261 -1 890 184 0 7 chr2 28866819 28866971 -224389612 - FRAM SINE Alu -20 156 6 1162 23 0 0 chr2 28867483 28867615 -224388968 - AluYa5/8 SINE Alu -9 302 171 316 275 61 46 chr2 28867844 28867975 -224388608 + MIR SINE MIR 17 149 -113 764 198 84 55 chr2 28868168 28868441 -224388142 - L1MC5 LINE L1 -435 7526 7246 477 245 84 21 chr2 28868648 28868791 -224387792 + L2 LINE L2 3162 3313 0 261 0 0 0 chr2 28869886 28869915 -224386668 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1574 189 18 0 chr2 28869917 28870192 -224386391 - AluJo SINE Alu -31 281 2 7549 29 5 0 chr2 28870618 28871777 -224384806 + L1PA5 LINE L1 4983 6145 -9 262 386 44 0 chr2 28872062 28872220 -224384363 + MIR SINE MIR 13 177 -85 780 176 28 60 chr2 28872629 28872845 -224383738 - L1MC4 LINE L1 -152 7890 7682 529 116 23 12 chr2 28872879 28872965 -224383618 - FLAM SINE Alu -16 127 41 1541 213 80 4 chr2 28872982 28873471 -224383112 - L1MC4 LINE L1 -363 7679 6990 694 177 19 32 chr2 28873478 28873636 -224382947 - L1MC4 LINE L1 -1410 6632 6477 254 372 105 21 chr2 28873806 28874139 -224382444 + L2 LINE L2 2600 2960 -354 30 0 0 0 chr2 28875962 28875992 -224380591 + AT_rich Low_complexity Low_complexity 1 30 0 210 238 0 0 chr2 28876119 28876161 -224380422 + L2 LINE L2 3264 3305 -8 273 241 17 0 chr2 28876356 28876414 -224380169 - MIR3 SINE MIR -3 205 147 1389 235 108 38 chr2 28876454 28876982 -224379601 - L1MC4a LINE L1 -1680 6128 5564 253 164 233 27 chr2 28876986 28877059 -224379524 - MIR SINE MIR -116 146 59 600 285 19 94 chr2 28877065 28877321 -224379262 + L2 LINE L2 3035 3271 -1 425 311 122 39 chr2 28877427 28877713 -224378870 + L3 LINE CR1 856 1165 -412 356 348 43 7 chr2 28877748 28877889 -224378694 - MIR SINE MIR -109 153 8 224 221 0 15 chr2 28878519 28878587 -224377996 + CT-rich Low_complexity Low_complexity 3 69 0 337 271 124 23 chr2 28878606 28878783 -224377800 - L1ME LINE L1 -407 5714 5520 277 275 81 34 chr2 28879934 28880254 -224376329 - L1ME LINE L1 -1555 4591 4257 305 333 146 19 chr2 28881236 28881557 -224375026 - L1ME LINE L1 -2201 3945 3584 2197 92 0 38 chr2 28881990 28882305 -224374278 + AluSx SINE Alu 1 303 -9 23 0 0 0 chr2 28884080 28884103 -224372480 + AT_rich Low_complexity Low_complexity 1 23 0 2255 102 0 16 chr2 28884247 28884561 -224372022 + AluSx SINE Alu 1 309 -3 25 31 0 0 chr2 28884752 28884784 -224371799 + AT_rich Low_complexity Low_complexity 1 32 0 1185 186 219 0 chr2 28884862 28885104 -224371479 - AluJb SINE Alu -7 295 1 485 286 44 118 chr2 28888032 28888395 -224368188 - MER102b DNA MER1_type -5 336 1 1131 112 10 36 chr2 28889728 28889924 -224366659 - AluSq SINE Alu -18 295 105 990 153 31 0 chr2 28890678 28890841 -224365742 - MER58B DNA MER1_type 0 341 174 836 78 0 0 chr2 28890843 28890959 -224365624 + L1MA5A LINE L1 6178 6293 -4 262 229 0 0 chr2 28891035 28891083 -224365500 - MER58B DNA MER1_type -292 49 2 253 264 7 101 chr2 28891327 28891390 -224365193 + MIR SINE MIR 97 140 -122 1641 176 35 67 chr2 28891390 28891764 -224364819 + MLT1A1 LTR MaLR 4 365 0 253 264 7 101 chr2 28891764 28891848 -224364735 + MIR SINE MIR 140 230 -32 2996 131 4 0 chr2 28891926 28892384 -224364199 + L1PA15 LINE L1 5706 6165 0 2988 194 25 56 chr2 28892598 28893366 -224363217 + L1MA9 LINE L1 5544 6287 -25 22 0 0 0 chr2 28893410 28893432 -224363151 + AT_rich Low_complexity Low_complexity 1 22 0 549 319 16 11 chr2 28893995 28894177 -224362406 - L3 LINE CR1 -364 1213 1031 226 313 192 37 chr2 28894715 28894811 -224361772 - L2 LINE L2 -189 3083 3003 2322 78 7 3 chr2 28894811 28895106 -224361477 + AluY SINE Alu 1 296 -15 226 313 192 37 chr2 28895106 28895223 -224361360 - L2 LINE L2 -269 3003 2837 204 40 0 0 chr2 28895502 28895527 -224361056 + (TA)n Simple_repeat Simple_repeat 2 26 0 916 193 99 12 chr2 28895656 28895899 -224360684 + MER5C DNA MER1_type 60 323 -1 22 0 0 0 chr2 28896051 28896073 -224360510 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr2 28896143 28896167 -224360416 + AT_rich Low_complexity Low_complexity 1 24 0 794 221 149 0 chr2 28896543 28896751 -224359832 + Charlie1 DNA MER1_type 1 239 -2522 4635 229 38 10 chr2 28896809 28898062 -224358521 + L1M4 LINE L1 3488 4774 -1372 275 341 77 0 chr2 28898182 28898273 -224358310 + L3 LINE CR1 63 160 -1417 796 309 146 12 chr2 28898316 28898801 -224357782 + L3 LINE CR1 264 813 -764 786 229 240 4 chr2 28900110 28900368 -224356215 - L1MD2 LINE L1 -11 6348 6030 2160 141 141 21 chr2 28900607 28900983 -224355600 - MSTC LTR MaLR 0 428 8 230 366 8 8 chr2 28901923 28902054 -224354529 - L2 LINE L2 -1407 1907 1777 1251 146 87 78 chr2 28902247 28902568 -224354015 + MER33 DNA MER1_type 1 324 0 264 272 0 48 chr2 28904010 28904038 -224352545 + LTR67 LTR ERVL 456 553 -4 314 213 27 27 chr2 28904038 28904113 -224352470 + MLT1K LTR MaLR 510 584 -4 357 253 154 6 chr2 28904136 28904298 -224352285 + L2 LINE L2 3116 3301 -12 197 33 33 0 chr2 28904299 28904329 -224352254 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 1453 274 94 26 chr2 28904381 28905041 -224351542 - L1MC4a LINE L1 -1643 6165 5461 488 301 51 0 chr2 28905042 28905198 -224351385 + L1ME LINE L1 308 471 -5901 * 620 278 69 18 chr2 28905187 28905464 -224351119 + L1ME LINE L1 1198 1488 -4896 3828 163 1 1 chr2 28905673 28906330 -224350253 - L1PA16 LINE L1 -1 6165 5509 475 272 81 0 chr2 28906357 28906493 -224350090 + L2 LINE L2 3167 3313 0 328 277 40 61 chr2 28906497 28906645 -224349938 + MIR SINE MIR 47 191 -71 2816 10 0 0 chr2 28907592 28907900 -224348683 - AluYa5 SINE Alu -3 308 1 358 311 98 6 chr2 28908896 28909060 -224347523 + L2 LINE L2 2862 3040 -273 471 270 73 0 chr2 28909087 28909224 -224347359 - L2 LINE L2 -564 2750 2604 1968 86 11 39 chr2 28909327 28909606 -224346977 - AluY SINE Alu -40 271 1 237 259 0 0 chr2 28910685 28910739 -224345844 - L2 LINE L2 -838 2476 2423 2292 161 17 128 chr2 28910752 28911344 -224345239 + Tigger7 DNA MER2_type 1 526 -1961 542 204 0 11 chr2 28911338 28911431 -224345152 + Tigger7 DNA MER2_type 2400 2491 0 * 449 262 63 46 chr2 28911439 28911676 -224344907 - L2 LINE L2 -882 2432 2192 242 125 21 0 chr2 28911680 28911728 -224344855 + CT-rich Low_complexity Low_complexity 2 50 0 372 294 79 8 chr2 28912966 28913092 -224343491 + MIR3 SINE MIR 67 201 -7 682 223 94 40 chr2 28915203 28915427 -224341156 + MIR SINE MIR 12 247 -15 224 361 58 24 chr2 28916227 28916432 -224340151 + L2 LINE L2 1194 1405 -1909 268 218 73 0 chr2 28919293 28919348 -224337235 - L2 LINE L2 0 3272 3214 417 263 86 119 chr2 28919679 28919919 -224336664 + L1P4 LINE L1 5297 5543 -618 2397 69 3 0 chr2 28919919 28920246 -224336337 - AluSx SINE Alu 0 328 1 417 263 86 119 chr2 28920246 28920579 -224336004 + L1P4 LINE L1 5543 5847 -314 25 0 0 28 chr2 28920778 28920799 -224335784 + AT_rich Low_complexity Low_complexity 1 22 -13 7742 16 13 0 chr2 28920799 28921864 -224334719 - L1PA3 LINE L1 -3 6152 5083 25 0 0 28 chr2 28921864 28921878 -224334705 + AT_rich Low_complexity Low_complexity 22 35 0 402 332 152 23 chr2 28921879 28922228 -224334355 - L2 LINE L2 -1230 2084 1691 2419 56 0 20 chr2 28922462 28922765 -224333818 - AluY SINE Alu -14 297 1 210 246 87 43 chr2 28925043 28925112 -224331471 + L2 LINE L2 3186 3257 -15 1564 144 16 19 chr2 28925114 28925371 -224331212 - AluJo SINE Alu -20 292 37 2108 113 0 3 chr2 28925384 28925694 -224330889 - AluSx SINE Alu 0 309 1 2765 7 0 0 chr2 28925706 28926034 -224330549 - AluYa5 SINE Alu 0 328 1 641 258 100 29 chr2 28926094 28926334 -224330249 + MIR SINE MIR 2 258 -4 2537 64 0 0 chr2 28926780 28927091 -224329492 - AluY SINE Alu 0 311 1 273 383 48 13 chr2 28927155 28927385 -224329198 + L2 LINE L2 2852 3089 -183 25 51 0 0 chr2 28927397 28927436 -224329147 + AT_rich Low_complexity Low_complexity 1 39 0 586 259 144 10 chr2 28978919 28979120 -224277463 + MIR SINE MIR 35 262 0 244 269 45 13 chr2 28980520 28980678 -224275905 + MIR SINE MIR 13 244 -18 308 271 50 50 chr2 28980935 28981075 -224275508 - MIR SINE MIR -70 192 53 325 148 25 37 chr2 28981409 28981490 -224275093 + G-rich Low_complexity Low_complexity 1 80 0 225 323 131 10 chr2 28981504 28981573 -224275010 + MIR SINE MIR 21 107 -155 243 0 0 0 chr2 28981573 28981600 -224274983 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 225 323 131 10 chr2 28981600 28981629 -224274954 + MIR SINE MIR 107 131 -131 183 156 0 0 chr2 28981757 28981789 -224274794 + T-rich Low_complexity Low_complexity 4 35 0 1493 187 52 0 chr2 28981828 28981978 -224274605 - AluJo SINE Alu -31 281 109 245 51 26 0 chr2 28981978 28982017 -224274566 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 1493 187 52 0 chr2 28982017 28982133 -224274450 - AluJo SINE Alu -203 109 1 868 146 79 18 chr2 28982367 28982532 -224274051 + MER53 DNA DNA 1 175 -14 215 215 15 62 chr2 28983936 28984001 -224272582 + MIR SINE MIR 85 146 -116 1220 132 0 0 chr2 28984207 28984374 -224272209 - AluSg/x SINE Alu -12 300 134 2419 75 0 16 chr2 28984374 28984680 -224271903 - AluSg SINE Alu -9 301 1 29 60 0 0 chr2 28985304 28985354 -224271229 + AT_rich Low_complexity Low_complexity 1 50 0 812 140 0 0 chr2 28985999 28986113 -224270470 - AluSq/x SINE Alu -199 114 1 1473 183 57 47 chr2 28986113 28986444 -224270139 - L1M4 LINE L1 -1436 4710 4373 2161 150 0 0 chr2 28986444 28986751 -224269832 - AluSx SINE Alu -3 309 3 1473 183 57 47 chr2 28986751 28986823 -224269760 - L1M4 LINE L1 -1773 4373 4303 2323 65 0 39 chr2 28986840 28987149 -224269434 - AluY SINE Alu -14 297 1 903 148 0 0 chr2 28988055 28988190 -224268393 + AluSq/x SINE Alu 1 135 -177 1926 91 84 15 chr2 28988200 28988474 -224268109 + AluSx SINE Alu 10 302 -10 493 322 173 24 chr2 28988871 28989241 -224267342 + L2 LINE L2 2848 3272 0 2467 65 0 0 chr2 28989698 28989988 -224266595 + AluY SINE Alu 1 290 -21 286 299 8 63 chr2 28990052 28990179 -224266404 + MIR SINE MIR 25 144 -64 472 213 0 32 chr2 28990213 28990307 -224266276 + AluJ/FLAM SINE Alu 2 92 -220 2492 87 3 0 chr2 28990489 28990801 -224265782 - AluSp SINE Alu 0 313 1 211 341 99 11 chr2 28991180 28991271 -224265312 - L2 LINE L2 -20 3252 3154 373 263 12 0 chr2 28991280 28991360 -224265223 + MER58 DNA MER1_type 1 81 -134 195 114 0 0 chr2 28991360 28991395 -224265188 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1794 136 0 4 chr2 28991398 28991656 -224264927 - AluSx SINE Alu -30 282 26 1692 212 18 68 chr2 28991757 28991814 -224264769 - L1ME LINE L1 -407 5759 5701 1688 180 44 3 chr2 28991814 28992108 -224264475 + AluJo SINE Alu 1 306 -6 2262 114 0 0 chr2 28992108 28992415 -224264168 + AluSx SINE Alu 1 308 -4 1692 212 18 68 chr2 28992415 28992814 -224263769 - L1ME LINE L1 -463 5703 5325 1224 160 9 43 chr2 28992816 28992992 -224263591 - AluJb SINE Alu -2 310 129 2299 95 0 3 chr2 28992992 28993287 -224263296 - AluSc SINE Alu -15 294 1 2322 108 7 0 chr2 28993289 28993596 -224262987 - AluSc SINE Alu 0 309 1 1224 160 9 43 chr2 28993596 28993647 -224262936 - AluJb SINE Alu -184 128 88 1534 237 97 0 chr2 28993658 28994113 -224262470 - L1ME LINE L1 -825 5321 4823 1603 115 13 4 chr2 28994115 28994341 -224262242 - AluSg/x SINE Alu -15 297 70 817 230 94 62 chr2 28994542 28994651 -224261932 + L1MD2 LINE L1 6027 6131 -228 198 103 0 0 chr2 28994651 28994680 -224261903 + (CA)n Simple_repeat Simple_repeat 2 30 0 817 230 94 62 chr2 28994680 28994879 -224261704 + L1MD2 LINE L1 6131 6345 -14 1999 125 3 32 chr2 28995596 28995907 -224260676 - AluJb SINE Alu -10 302 1 195 184 26 0 chr2 28996706 28996744 -224259839 - L2 LINE L2 -2 3311 3273 645 282 126 38 chr2 28996816 28997254 -224259329 + L2 LINE L2 2769 3247 -66 514 282 46 40 chr2 28997508 28997682 -224258901 - MIR SINE MIR -74 188 14 3514 193 116 30 chr2 28998030 28998987 -224257596 - L1MC4 LINE L1 0 8042 7004 1312 258 115 0 chr2 28999050 28999415 -224257168 - MLT1E2 LTR MaLR 0 626 220 605 223 133 70 chr2 28999551 28999738 -224256845 - L1MC5 LINE L1 -44 7917 7743 1860 151 6 31 chr2 28999738 29000057 -224256526 - AluJo SINE Alu -1 311 1 605 223 133 70 chr2 29000057 29000214 -224256369 - L1MC5 LINE L1 -218 7743 7551 2167 124 0 3 chr2 29000304 29000595 -224255988 - AluSx SINE Alu -22 290 1 1923 176 0 0 chr2 29000674 29000986 -224255597 - AluJb SINE Alu 0 312 1 1447 194 46 135 chr2 29000991 29001516 -224255067 - Charlie4a DNA MER1_type 0 508 31 206 277 31 15 chr2 29001606 29001671 -224254912 - MIR SINE MIR -103 105 40 2446 92 0 0 chr2 29001710 29002014 -224254569 - AluSx SINE Alu -8 304 1 462 226 43 0 chr2 29002213 29002328 -224254255 - L1ME1 LINE L1 -3 6163 6044 1854 173 6 6 chr2 29002717 29003029 -224253554 - AluJo SINE Alu 0 312 1 2383 140 6 11 chr2 29003363 29003713 -224252870 - MER7A DNA MER2_type 0 346 1 435 325 30 20 chr2 29005015 29005215 -224251368 + MIR SINE MIR 20 221 -41 512 296 49 0 chr2 29006521 29006663 -224249920 + MER91A DNA MER1_type 21 169 -27 229 290 72 0 chr2 29006669 29006738 -224249845 + MER91A DNA MER1_type 123 196 0 249 217 33 109 chr2 29007448 29007494 -224249089 - MIR3 SINE MIR -7 201 164 1062 225 14 9 chr2 29007494 29007716 -224248867 - MER58A DNA MER1_type 0 224 2 249 217 33 109 chr2 29007716 29007761 -224248822 - MIR3 SINE MIR -44 164 117 333 0 0 0 chr2 29009265 29009302 -224247281 + (TG)n Simple_repeat Simple_repeat 2 38 0 326 232 21 0 chr2 29009804 29009899 -224246684 + CT-rich Low_complexity Low_complexity 4 100 0 289 250 116 9 chr2 29010192 29010304 -224246279 + MIR3 SINE MIR 53 176 -32 218 254 63 16 chr2 29010850 29010913 -224245670 - L2 LINE L2 0 3272 3207 27 0 0 0 chr2 29011126 29011153 -224245430 + AT_rich Low_complexity Low_complexity 1 27 0 222 339 42 92 chr2 29011465 29011725 -224244858 - L2 LINE L2 -22 3250 3004 2402 87 0 3 chr2 29012622 29012922 -224243661 - AluSq SINE Alu -12 301 3 351 264 66 26 chr2 29012976 29013203 -224243380 - L1MC5 LINE L1 -182 7779 7544 532 289 171 5 chr2 29013588 29013799 -224242784 + MIR SINE MIR 1 246 -16 1965 142 14 10 chr2 29013800 29014096 -224242487 - AluSx SINE Alu -15 297 1 2053 123 23 7 chr2 29015009 29015309 -224241274 - AluSq SINE Alu -8 305 1 2298 109 0 0 chr2 29016319 29016630 -224239953 + AluY SINE Alu 1 311 0 450 247 107 65 chr2 29016637 29016900 -224239683 + L1MEc LINE L1 1850 2123 -4273 350 260 88 103 chr2 29016912 29017251 -224239332 + L2 LINE L2 2851 3184 -129 1468 161 58 8 chr2 29017286 29017546 -224239037 + AluJb SINE Alu 1 273 -39 268 217 167 0 chr2 29017700 29017760 -224238823 - MER58 DNA MER1_type -1 2419 2350 262 352 82 38 chr2 29017932 29018091 -224238492 - L2 LINE L2 0 3272 3107 541 349 100 40 chr2 29018165 29018795 -224237788 - L2 LINE L2 -342 2972 2305 250 125 0 0 chr2 29019152 29019192 -224237391 + L1MB4 LINE L1 5892 5931 -249 189 107 0 0 chr2 29019210 29019238 -224237345 + (A)n Simple_repeat Simple_repeat 1 28 0 22 0 0 0 chr2 29019264 29019286 -224237297 + AT_rich Low_complexity Low_complexity 1 22 0 755 233 87 23 chr2 29019310 29019529 -224237054 - MIR SINE MIR -13 249 17 264 375 80 0 chr2 29020310 29020398 -224236185 - L2 LINE L2 -25 3247 3153 2185 90 35 0 chr2 29021233 29021521 -224235062 + AluSx SINE Alu 1 298 -14 228 240 0 20 chr2 29021697 29021747 -224234836 + (CA)n Simple_repeat Simple_repeat 1 49 0 1103 153 0 0 chr2 29022062 29022225 -224234358 - AluSg/x SINE Alu -11 301 139 2125 119 0 3 chr2 29022519 29022813 -224233770 + AluSq SINE Alu 1 293 -20 2285 112 0 3 chr2 29023912 29024217 -224232366 - AluSg SINE Alu -6 304 1 831 169 0 8 chr2 29024450 29024580 -224232003 - FLAM_C SINE Alu -4 129 1 288 176 15 59 chr2 29025388 29025456 -224231127 + MLT1L LTR MaLR 2 66 -549 742 241 256 9 chr2 29025514 29025838 -224230745 + MLT1L LTR MaLR 200 603 -12 1482 89 0 5 chr2 29026700 29026891 -224229692 - AluSq SINE Alu -9 304 115 236 262 9 84 chr2 29027262 29027369 -224229214 - MIR SINE MIR -46 216 118 1176 140 21 72 chr2 29027525 29027584 -224228999 - L1MD1 LINE L1 -10 6232 6172 2277 128 0 0 chr2 29027584 29027897 -224228686 + AluSq SINE Alu 1 313 0 1176 140 21 72 chr2 29027897 29028073 -224228510 - L1MD1 LINE L1 -70 6172 6009 357 24 0 0 chr2 29028135 29028177 -224228406 + (CA)n Simple_repeat Simple_repeat 2 43 0 521 184 132 7 chr2 29028435 29028571 -224228012 - MLT1J2 LTR MaLR -278 172 20 557 243 98 55 chr2 29028571 29028826 -224227757 + L1ME3A LINE L1 5685 5950 -220 583 187 89 16 chr2 29028901 29029024 -224227559 + FLAM_A SINE Alu 2 133 0 26 30 0 0 chr2 29030739 29030772 -224225811 + AT_rich Low_complexity Low_complexity 1 33 0 180 0 0 0 chr2 29030893 29030913 -224225670 + (A)n Simple_repeat Simple_repeat 1 20 0 1512 214 89 3 chr2 29032007 29032320 -224224263 + MER58B DNA MER1_type 1 340 -1 730 290 82 51 chr2 29032450 29032840 -224223743 - L2 LINE L2 -13 3300 2899 357 264 95 10 chr2 29032916 29033158 -224223425 - L2 LINE L2 -815 2499 2185 444 217 40 86 chr2 29033803 29033955 -224222628 + MER5A DNA MER1_type 7 151 -38 587 287 66 11 chr2 29035273 29035488 -224221095 + MIR SINE MIR 38 262 0 194 291 81 12 chr2 29035522 29035608 -224220975 - L3b LINE CR1 -223 1360 1269 2266 113 0 16 chr2 29035615 29035926 -224220657 - AluSx SINE Alu -6 306 1 1878 137 29 29 chr2 29036475 29036781 -224219802 + AluJb SINE Alu 3 308 -4 757 241 65 5 chr2 29037038 29037274 -224219309 + MIR SINE MIR 2 249 -13 1364 239 7 7 chr2 29037833 29038143 -224218440 - AluJo SINE Alu 0 312 3 606 279 93 8 chr2 29038985 29039222 -224217361 - MIR SINE MIR 0 262 6 229 257 184 33 chr2 29039257 29039409 -224217174 - MIR SINE MIR -13 249 75 955 85 16 23 chr2 29039860 29039989 -224216594 - FLAM_C SINE Alu -4 129 2 2389 94 0 0 chr2 29040078 29040376 -224216207 - AluSg SINE Alu -12 298 1 2035 108 7 0 chr2 29042443 29042722 -224213861 - AluSx SINE Alu -4 308 28 192 77 0 0 chr2 29043181 29043207 -224213376 + (CA)n Simple_repeat Simple_repeat 2 27 0 243 153 119 0 chr2 29043402 29043461 -224213122 - L1ME3 LINE L1 -210 5952 5887 26 30 0 0 chr2 29043479 29043512 -224213071 + AT_rich Low_complexity Low_complexity 1 33 0 2073 126 10 7 chr2 29043631 29043940 -224212643 + AluSx SINE Alu 1 310 -2 200 56 83 0 chr2 29043956 29043992 -224212591 + GA-rich Low_complexity Low_complexity 2 40 0 1135 279 97 29 chr2 29044042 29044699 -224211884 - L1ME3 LINE L1 -259 5903 5380 203 311 81 27 chr2 29044700 29044774 -224211809 - L2 LINE L2 -43 3229 3152 232 143 0 0 chr2 29045219 29045254 -224211329 - MLT1D LTR MaLR -470 35 1 555 329 88 8 chr2 29045821 29046061 -224210522 + MIR SINE MIR 4 262 0 240 149 0 0 chr2 29046176 29046223 -224210360 + (TCTCTG)n Simple_repeat Simple_repeat 2 48 0 1719 167 32 0 chr2 29046301 29046583 -224210000 + AluJo SINE Alu 3 293 -19 270 136 0 0 chr2 29046741 29046785 -224209798 + (TC)n Simple_repeat Simple_repeat 1 44 0 502 264 0 23 chr2 29047942 29048071 -224208512 - MLT1D LTR MaLR -349 156 31 198 0 0 0 chr2 29050504 29050526 -224206057 + (A)n Simple_repeat Simple_repeat 1 22 0 2876 176 36 52 chr2 29051251 29051889 -224204694 - L1ME1 LINE L1 -137 6029 5402 3769 196 32 39 chr2 29051891 29052205 -224204378 - L1ME1 LINE L1 -801 5345 5030 1823 150 59 83 chr2 29052205 29052362 -224204221 + MLT1A1 LTR MaLR 1 160 -205 2168 122 3 0 chr2 29052362 29052650 -224203933 - AluSp SINE Alu -24 289 1 1823 150 59 83 chr2 29052650 29052866 -224203717 + MLT1A1 LTR MaLR 160 365 0 3769 196 32 39 chr2 29052866 29053531 -224203052 - L1ME1 LINE L1 -1116 5030 4373 223 158 0 0 chr2 29053547 29053585 -224202998 - L2 LINE L2 -9 3304 3267 2243 103 3 0 chr2 29053842 29054134 -224202449 - AluSx SINE Alu -17 295 3 2270 99 0 7 chr2 29055089 29055381 -224201202 + AluSx SINE Alu 3 292 -20 318 50 0 0 chr2 29055670 29055710 -224200873 + (CA)n Simple_repeat Simple_repeat 1 40 0 636 138 0 0 chr2 29056143 29056259 -224200324 + (TC)n Simple_repeat Simple_repeat 1 116 0 4221 53 12 0 chr2 29056265 29056757 -224199826 - L1PA5 LINE L1 -5 6149 5652 252 229 145 53 chr2 29058169 29058300 -224198283 - L1MC5 LINE L1 -58 7903 7761 755 118 100 0 chr2 29058416 29058526 -224198057 + FLAM_C SINE Alu 2 122 -21 260 164 15 0 chr2 29058531 29058598 -224197985 + GA-rich Low_complexity Low_complexity 2 69 0 2498 68 0 0 chr2 29058739 29059035 -224197548 - AluY SINE Alu -15 296 1 241 254 99 0 chr2 29059226 29059297 -224197286 + L2 LINE L2 3159 3236 -36 519 148 0 11 chr2 29059593 29059681 -224196902 - AluSg/x SINE Alu -7 302 216 620 278 64 6 chr2 29060451 29060624 -224195959 + MER5A DNA MER1_type 1 183 -6 275 356 24 87 chr2 29063009 29063298 -224193285 + L2 LINE L2 2981 3251 -21 209 152 0 0 chr2 29064025 29064058 -224192525 - L2 LINE L2 -9 3304 3272 2145 97 3 17 chr2 29064446 29064735 -224191848 - AluSc SINE Alu -24 285 1 253 344 11 11 chr2 29064745 29064835 -224191748 + MIR SINE MIR 18 107 -155 350 110 22 44 chr2 29064998 29065089 -224191494 + L1ME LINE L1 5346 5434 -687 580 288 23 104 chr2 29065872 29066306 -224190277 - L2 LINE L2 0 3272 2874 2085 110 13 23 chr2 29066326 29066626 -224189957 + AluSx SINE Alu 1 297 -15 180 0 0 0 chr2 29066706 29066726 -224189857 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1409 191 11 14 chr2 29066728 29067011 -224189572 - AluJo SINE Alu -30 282 1 2104 99 0 11 chr2 29067934 29068237 -224188346 - AluSc SINE Alu 0 300 1 1657 171 11 21 chr2 29068405 29068722 -224187861 - AluJb SINE Alu 0 314 1 2335 108 0 6 chr2 29069114 29069428 -224187155 - AluSx SINE Alu 0 312 1 2319 97 10 0 chr2 29070613 29070912 -224185671 - AluSx SINE Alu -10 302 1 739 269 68 94 chr2 29072343 29072860 -224183723 + L1MC4 LINE L1 7004 7533 -509 1585 174 0 55 chr2 29072860 29073171 -224183412 - AluJo SINE Alu -3 309 16 739 269 68 94 chr2 29073171 29073350 -224183233 + L1MC4 LINE L1 7533 7715 -327 2402 98 0 0 chr2 29073350 29073657 -224182926 + AluSq SINE Alu 1 307 -6 739 269 68 94 chr2 29073657 29074035 -224182548 + L1MC4 LINE L1 7715 8040 -2 2261 103 7 0 chr2 29074265 29074555 -224182028 - AluSg SINE Alu -18 292 1 541 298 22 28 chr2 29075311 29075489 -224181094 - MIR SINE MIR -66 196 20 1372 143 0 52 chr2 29075881 29076111 -224180472 + MER20 DNA MER1_type 1 218 -1 248 368 60 8 chr2 29078090 29078223 -224178360 + MIR3 SINE MIR 13 152 -56 1324 103 0 5 chr2 29079054 29079239 -224177344 - AluSp SINE Alu 0 313 130 348 318 226 0 chr2 29079807 29080024 -224176559 + L3 LINE CR1 1307 1572 -5 436 260 83 30 chr2 29080915 29081084 -224175499 - MIR3 SINE MIR -1 207 30 261 268 268 9 chr2 29081683 29081795 -224174788 - MIR3 SINE MIR -31 177 37 425 289 53 83 chr2 29081837 29081925 -224174658 + MIR SINE MIR 20 109 -153 1933 116 0 96 chr2 29081925 29082260 -224174323 + AluJb SINE Alu 1 303 -9 425 289 53 83 chr2 29082260 29082399 -224174184 + MIR SINE MIR 109 240 -22 451 173 370 25 chr2 29082418 29082580 -224174003 + MER112 DNA MER1_type 4 221 -39 303 287 57 33 chr2 29084418 29084540 -224172043 - L2 LINE L2 -7 3265 3141 2296 108 0 0 chr2 29085601 29085906 -224170677 - AluSx SINE Alu -7 305 1 304 314 103 27 chr2 29086072 29086257 -224170326 + MIR SINE MIR 9 207 -55 1110 212 5 0 chr2 29087464 29087667 -224168916 + MER58A DNA MER1_type 1 204 -20 541 363 0 0 chr2 29088484 29088619 -224167964 - L2 LINE L2 -1 3271 3137 261 0 0 0 chr2 29088846 29088875 -224167708 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2081 125 0 0 chr2 29088877 29089157 -224167426 - AluSx SINE Alu -32 280 1 180 189 176 27 chr2 29090614 29090688 -224165895 - MIR SINE MIR -68 194 110 445 292 159 10 chr2 29091144 29091339 -224165244 + MIR SINE MIR 12 235 -27 22 35 0 0 chr2 29091861 29091890 -224164693 + AT_rich Low_complexity Low_complexity 1 29 0 505 283 7 7 chr2 29093841 29093986 -224162597 - L2 LINE L2 -1 3312 3168 2206 116 0 25 chr2 29094335 29094655 -224161928 - AluSx SINE Alu 0 312 1 2173 142 64 6 chr2 29094693 29095052 -224161531 + MLT1B LTR MaLR 11 390 0 533 256 109 42 chr2 29095311 29095712 -224160871 + LTR33 LTR ERVL 49 513 -8 282 377 43 0 chr2 29095712 29095850 -224160733 - L2 LINE L2 -974 2340 2197 2241 85 0 0 chr2 29096232 29096559 -224160024 + AluSx SINE Alu 2 328 0 591 243 33 13 chr2 29096681 29096833 -224159750 - MIR SINE MIR -48 214 60 21 36 0 0 chr2 29098068 29098096 -224158487 + AT_rich Low_complexity Low_complexity 1 28 0 288 271 0 0 chr2 29098134 29098204 -224158379 + L1ME LINE L1 5563 5632 -489 1678 164 27 24 chr2 29098314 29098612 -224157971 + AluJo SINE Alu 1 299 -13 30 27 0 0 chr2 29098912 29098949 -224157634 + AT_rich Low_complexity Low_complexity 1 37 0 315 237 0 54 chr2 29099890 29099983 -224156600 - L1MC4a LINE L1 -1892 5916 5829 206 330 91 0 chr2 29100199 29100287 -224156296 + L3 LINE CR1 1407 1502 -75 180 0 0 0 chr2 29100883 29100903 -224155680 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 302 0 26 0 chr2 29100907 29100945 -224155638 + (TG)n Simple_repeat Simple_repeat 2 40 0 1867 233 5 16 chr2 29101641 29102019 -224154564 - MLT1A2 LTR MaLR 0 374 1 352 245 0 21 chr2 29103070 29103164 -224153419 - L2 LINE L2 -63 3250 3159 15678 166 24 52 chr2 29103207 29105107 -224151476 + L1MA4A LINE L1 1 1954 -5411 2290 126 0 0 chr2 29105107 29105416 -224151167 + AluSx SINE Alu 1 309 -3 15678 166 24 52 chr2 29105416 29110573 -224146010 + L1MA4A LINE L1 1954 7294 -71 2197 85 0 24 chr2 29110674 29110967 -224145616 - AluY SINE Alu -25 286 1 266 260 68 0 chr2 29111950 29112023 -224144560 + L2 LINE L2 3230 3307 -6 22 0 0 0 chr2 29112423 29112445 -224144138 + AT_rich Low_complexity Low_complexity 1 22 0 2055 119 0 7 chr2 29113260 29113572 -224143011 - AluSx SINE Alu 0 310 1 23 33 0 0 chr2 29113895 29113925 -224142658 + AT_rich Low_complexity Low_complexity 1 30 0 218 325 17 43 chr2 29114811 29114928 -224141655 + C-rich Low_complexity Low_complexity 6 119 0 472 268 142 21 chr2 29116350 29116653 -224139930 - L1ME LINE L1 -504 5617 5255 462 218 10 0 chr2 29117188 29117289 -224139294 - MIR SINE MIR -5 257 156 282 255 50 71 chr2 29117310 29117451 -224139132 + MLT1J2 LTR MaLR 23 160 -290 240 234 0 0 chr2 29117660 29117707 -224138876 + MLT1I LTR MaLR 361 407 -2 2272 108 0 10 chr2 29117721 29118026 -224138557 + AluSc SINE Alu 1 302 -7 375 121 136 0 chr2 29118031 29118097 -224138486 - MIR SINE MIR -101 161 87 436 295 16 16 chr2 29118585 29118714 -224137869 - L2 LINE L2 0 3313 3185 269 210 0 160 chr2 29119047 29119166 -224137417 + MER91A DNA MER1_type 55 154 -42 530 258 18 12 chr2 29119428 29119618 -224136965 - MIR SINE MIR 0 262 7 1618 127 57 96 chr2 29119723 29119885 -224136698 + AluJo SINE Alu 1 147 -165 189 107 0 0 chr2 29119885 29119913 -224136670 + (CAA)n Simple_repeat Simple_repeat 2 29 0 1618 127 57 96 chr2 29119913 29120064 -224136519 + AluJo SINE Alu 147 302 -10 196 167 28 0 chr2 29120096 29120132 -224136451 + L2 LINE L2 3262 3298 -15 1571 160 4 0 chr2 29120462 29120706 -224135877 - AluJo SINE Alu -67 245 1 316 240 34 23 chr2 29121065 29121173 -224135410 - MIR SINE MIR -92 116 11 2151 123 7 0 chr2 29123722 29124023 -224132560 + AluSx SINE Alu 1 303 -9 285 235 12 37 chr2 29124137 29124218 -224132365 + MIR SINE MIR 111 189 -73 1212 176 5 23 chr2 29124715 29124931 -224131652 - AluJb SINE Alu -14 298 87 218 246 16 16 chr2 29124956 29125017 -224131566 + L2 LINE L2 3203 3263 -9 314 277 36 27 chr2 29125057 29125169 -224131414 - MIR SINE MIR -51 211 99 207 100 0 0 chr2 29126293 29126323 -224130260 + (A)n Simple_repeat Simple_repeat 1 30 0 2143 104 3 0 chr2 29127401 29127690 -224128893 - AluSx SINE Alu -22 290 1 273 172 40 101 chr2 29127783 29127882 -224128701 - HAL1 LINE L1 -2 2505 2413 244 350 150 0 chr2 29128053 29128173 -224128410 - L2 LINE L2 -8 3264 3127 414 375 112 13 chr2 29128239 29128902 -224127681 - L2 LINE L2 -251 3021 2291 2375 72 7 13 chr2 29129946 29130252 -224126331 - AluSp SINE Alu -8 305 2 1853 159 10 10 chr2 29130348 29130644 -224125939 - AluJo SINE Alu -16 296 1 273 339 115 15 chr2 29131967 29132097 -224124486 + MIR3 SINE MIR 8 150 -58 197 256 23 0 chr2 29132925 29132968 -224123615 + MIR SINE MIR 213 256 -6 2293 96 3 3 chr2 29133003 29133304 -224123279 + AluSg SINE Alu 1 301 -9 204 97 0 0 chr2 29133826 29133857 -224122726 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2695 157 55 21 chr2 29135552 29136081 -224120502 + L1MA9 LINE L1 5729 6275 -37 475 238 105 7 chr2 29136185 29136328 -224120255 - MIR SINE MIR -19 243 87 516 285 150 10 chr2 29136442 29136649 -224119934 + MIR SINE MIR 10 245 -17 448 256 17 8 chr2 29137242 29137359 -224119224 - MIR SINE MIR -126 136 19 490 264 60 22 chr2 29137412 29137594 -224118989 + MER5A DNA MER1_type 1 189 0 998 199 46 51 chr2 29137974 29138014 -224118569 - L1P LINE L1 -764 5391 5352 3200 155 11 9 chr2 29138014 29138543 -224118040 - L1MB8 LINE L1 0 6178 5649 998 199 46 51 chr2 29138543 29138766 -224117817 - L1P LINE L1 -803 5352 5132 238 270 95 7 chr2 29138937 29139074 -224117509 + L1M LINE L1 5255 5403 -956 2558 51 0 0 chr2 29139931 29140226 -224116357 - AluY SINE Alu -16 295 1 395 325 52 7 chr2 29140286 29140440 -224116143 - MER20B DNA MER1_type -616 167 7 189 354 43 26 chr2 29141953 29142105 -224114478 - MIR SINE MIR -100 108 4 488 298 42 50 chr2 29142520 29142758 -224113825 - MIR SINE MIR -6 256 21 346 291 47 68 chr2 29143140 29143288 -224113295 + MIR3 SINE MIR 20 164 -44 1948 123 11 18 chr2 29143744 29144057 -224112526 + AluSq SINE Alu 1 311 0 327 323 37 63 chr2 29144810 29144913 -224111670 - MIR SINE MIR -4 258 161 14862 110 36 1 chr2 29144913 29147755 -224108828 + L1PA10 LINE L1 3284 6168 0 327 323 37 63 chr2 29147755 29147840 -224108743 - MIR SINE MIR -101 161 75 217 321 179 14 chr2 29147866 29148006 -224108577 - MIR3 SINE MIR -43 165 3 620 282 97 9 chr2 29148543 29148759 -224107824 - MIR SINE MIR -1 261 27 2443 82 0 19 chr2 29150590 29150908 -224105675 - AluSx SINE Alu 0 312 1 240 313 96 9 chr2 29151803 29151918 -224104665 + MIR SINE MIR 84 208 -54 2710 198 137 35 chr2 29152209 29152479 -224104104 - L1ME2 LINE L1 0 6233 5992 2095 121 3 0 chr2 29152479 29152776 -224103807 + AluSx SINE Alu 1 298 -14 2710 198 137 35 chr2 29152776 29153364 -224103219 - L1ME2 LINE L1 -241 5992 5465 773 163 0 64 chr2 29153364 29153505 -224103078 - FLAM_C SINE Alu -1 132 1 2710 198 137 35 chr2 29153505 29154221 -224102362 - L1ME2 LINE L1 -768 5465 4493 1097 172 0 0 chr2 29154222 29154391 -224102192 - AluSg/x SINE Alu -10 302 134 2124 133 0 0 chr2 29154391 29154691 -224101892 - AluSq SINE Alu -5 308 9 61 27 0 0 chr2 29154708 29154783 -224101800 + AT_rich Low_complexity Low_complexity 1 75 0 464 182 30 68 chr2 29154783 29154915 -224101668 - L1ME2 LINE L1 -1778 4437 4311 1948 127 3 21 chr2 29154918 29155209 -224101374 - AluSx SINE Alu -10 302 17 766 153 0 0 chr2 29155209 29155320 -224101263 - AluJb SINE Alu -200 112 2 2174 227 124 39 chr2 29155324 29156155 -224100428 - L1ME2 LINE L1 -1906 4309 3408 * 2901 240 72 27 chr2 29156145 29157027 -224099556 - L1ME2 LINE L1 -3054 3161 2320 2371 96 0 10 chr2 29157027 29157339 -224099244 - AluSg SINE Alu -1 309 1 2462 103 0 0 chr2 29157339 29157650 -224098933 - AluSx SINE Alu -1 311 1 2901 240 72 27 chr2 29157650 29158111 -224098472 - L1ME2 LINE L1 -3894 2321 1810 310 262 35 19 chr2 29158368 29158493 -224098090 - MIR SINE MIR -62 146 43 611 250 67 12 chr2 29159108 29159272 -224097311 + MIR SINE MIR 20 192 -70 1408 233 51 28 chr2 29159273 29159668 -224096915 - MLT1E3 LTR MaLR 0 624 221 433 186 280 8 chr2 29159715 29159833 -224096750 - MLT1E3 LTR MaLR -503 151 2 2302 108 0 0 chr2 29160945 29161250 -224095333 + AluSx SINE Alu 1 305 -7 2573 63 0 0 chr2 29161323 29161626 -224094957 + AluY SINE Alu 1 303 -8 391 320 16 0 chr2 29161900 29162022 -224094561 + MIR SINE MIR 16 139 -69 227 174 22 22 chr2 29162827 29162873 -224093710 - MIR3 SINE MIR -9 199 154 603 329 11 15 chr2 29164248 29164510 -224092073 - MIR SINE MIR 0 262 3 286 320 213 0 chr2 29164694 29164816 -224091767 - L2 LINE L2 0 3272 3125 1892 133 59 14 chr2 29214871 29215157 -224041426 - AluJb SINE Alu -13 299 1 2359 99 0 16 chr2 29216161 29216509 -224040074 + AluSq SINE Alu 1 313 0 180 321 54 54 chr2 29216587 29216699 -224039884 + L2 LINE L2 3192 3303 -10 356 363 18 23 chr2 29217391 29217562 -224039021 - L1 LINE L1 -2316 3830 3661 242 313 133 5 chr2 29217679 29217874 -224038709 - L2 LINE L2 -2411 903 684 2322 117 3 0 chr2 29218003 29218330 -224038253 - AluSx SINE Alu 0 328 1 245 169 113 28 chr2 29218599 29218670 -224037913 + MIR SINE MIR 184 260 -2 286 276 112 17 chr2 29219035 29219151 -224037432 + MIR SINE MIR 24 150 -58 581 283 130 24 chr2 29219649 29219987 -224036596 + LTR16A LTR ERVL 1 362 -88 833 126 0 44 chr2 29220205 29220340 -224036243 - FLAM_C SINE Alu -14 129 1 434 248 48 67 chr2 29220379 29220589 -224035994 - MLT1K LTR MaLR -6 582 377 239 50 0 25 chr2 29220986 29221026 -224035557 - L1MB5 LINE L1 -9 6165 6127 742 141 0 8 chr2 29221040 29221161 -224035422 + AluJb SINE Alu 14 133 -179 1370 174 16 4 chr2 29221167 29221420 -224035163 - L1MB5 LINE L1 -33 6141 5886 1865 153 3 17 chr2 29221564 29221858 -224034725 - AluJb SINE Alu -4 308 19 381 295 71 86 chr2 29222508 29222718 -224033865 - MIR SINE MIR -37 225 19 214 339 26 0 chr2 29222731 29222846 -224033737 - L2 LINE L2 -233 3039 2922 4158 227 41 18 chr2 29223590 29224679 -224031904 - L1MC4 LINE L1 -141 7901 6788 6865 51 0 1 chr2 29224695 29225565 -224031018 - L1PA5 LINE L1 -8 6146 5278 320 176 40 14 chr2 29225559 29225633 -224030950 - L1MC4a LINE L1 -1085 6723 6648 * 479 188 0 0 chr2 29225873 29225958 -224030625 - AluJo SINE Alu -111 201 117 277 280 97 17 chr2 29226575 29226750 -224029833 - MIR SINE MIR -54 208 20 379 283 42 17 chr2 29226859 29226979 -224029604 + MIR SINE MIR 23 145 -63 2569 176 81 31 chr2 29228071 29228857 -224027726 - L1ME2 LINE L1 -168 5996 5170 315 167 32 32 chr2 29228859 29228921 -224027662 + Alu SINE Alu 1 48 -255 255 284 181 13 chr2 29229925 29230080 -224026503 - MIR SINE MIR -39 223 43 622 160 10 0 chr2 29230192 29230292 -224026291 - AluSp/q SINE Alu -18 295 195 292 219 94 10 chr2 29230843 29230939 -224025644 + L2 LINE L2 3168 3271 -1 295 218 42 99 chr2 29231076 29231218 -224025365 - L2 LINE L2 -452 2862 2729 248 293 83 68 chr2 29231473 29231678 -224024905 - L2 LINE L2 -362 2952 2745 682 185 0 13 chr2 29232603 29232760 -224023823 + CT-rich Low_complexity Low_complexity 2 156 0 248 196 18 0 chr2 29232921 29232977 -224023606 + (TAAA)n Simple_repeat Simple_repeat 1 57 0 281 202 112 34 chr2 29234164 29234253 -224022330 + L2 LINE L2 3217 3312 -1 1471 187 79 0 chr2 29234285 29234552 -224022031 + AluJo SINE Alu 1 288 -24 21 0 0 0 chr2 29234554 29234575 -224022008 + AT_rich Low_complexity Low_complexity 1 21 0 343 215 93 19 chr2 29235623 29235730 -224020853 + MIR SINE MIR 69 183 -79 22 0 0 0 chr2 29237435 29237457 -224019126 + AT_rich Low_complexity Low_complexity 1 22 0 2495 103 0 0 chr2 29237550 29237861 -224018722 + AluSx SINE Alu 1 311 -1 997 154 43 0 chr2 29237937 29238125 -224018458 - L1MB2 LINE L1 -1 6170 5975 225 65 0 0 chr2 29238144 29238175 -224018408 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1217 116 0 45 chr2 29238285 29238483 -224018100 + AluSc SINE Alu 115 303 -6 372 119 45 15 chr2 29238581 29238648 -224017935 - LTR42 LTR ERVL -65 430 362 * 1556 146 4 8 chr2 29238641 29238895 -224017688 - LTR42 LTR ERVL -242 253 1 2248 133 33 25 chr2 29238937 29239298 -224017285 - THE1B LTR MaLR 0 364 1 1806 170 12 3 chr2 29239455 29239785 -224016798 - L1MB3 LINE L1 -8 6175 5843 1719 169 6 48 chr2 29239785 29239943 -224016640 + AluJb SINE Alu 2 142 -170 1490 146 120 81 chr2 29239943 29240375 -224016208 - LTR7 LTR ERV1 0 450 2 1719 169 6 48 chr2 29240375 29240529 -224016054 + AluJb SINE Alu 142 301 -11 3401 193 13 7 chr2 29240529 29241715 -224014868 - L1MB3 LINE L1 -326 5857 4667 634 144 10 0 chr2 29241738 29241835 -224014748 + AluSg/x SINE Alu 78 175 -135 1813 286 85 11 chr2 29241935 29242585 -224013998 + L2 LINE L2 1665 2362 -952 3210 249 56 47 chr2 29242590 29243152 -224013431 + L1ME LINE L1 6 561 -5519 1420 166 68 64 chr2 29243152 29243448 -224013135 + AluJo SINE Alu 1 297 -15 3210 249 56 47 chr2 29243448 29244497 -224012086 + L1ME LINE L1 561 1640 -4440 493 223 108 135 chr2 29244502 29244798 -224011785 + L2 LINE L2 2353 2640 -674 207 0 0 0 chr2 29244800 29244823 -224011760 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 486 151 269 0 chr2 29244823 29244916 -224011667 - FLAM_C SINE Alu -24 119 2 921 281 76 14 chr2 29244917 29245385 -224011198 + L2 LINE L2 2632 3143 -170 636 141 29 129 chr2 29245425 29245595 -224010988 - FAM SINE Alu -13 172 20 2095 115 7 3 chr2 29245601 29245887 -224010696 - AluSx SINE Alu -25 287 1 238 169 145 24 chr2 29245918 29246001 -224010582 + LTR56 LTR ERV1 1 93 -352 803 142 83 100 chr2 29246417 29246657 -224009926 + LTR56 LTR ERV1 85 320 -125 556 214 0 15 chr2 29246783 29246914 -224009669 + L1MC4 LINE L1 7912 8040 -2 231 339 31 16 chr2 29247067 29247194 -224009389 + L2 LINE L2 1317 1445 -1869 219 238 0 0 chr2 29248260 29248302 -224008281 + MIR SINE MIR 109 150 -112 369 301 90 15 chr2 29248432 29248565 -224008018 - MIR SINE MIR -47 215 73 345 197 28 0 chr2 29249104 29249175 -224007408 - MIR SINE MIR -101 161 89 276 236 182 18 chr2 29249494 29249604 -224006979 + MIR3 SINE MIR 65 192 -16 210 324 29 9 chr2 29249736 29249841 -224006742 + MIR SINE MIR 35 141 -67 1077 174 5 20 chr2 29250273 29250469 -224006114 + AluSp SINE Alu 117 309 -4 732 233 36 26 chr2 29250736 29250929 -224005654 - MER89-int LTR ERV1 -6148 653 459 2237 103 10 3 chr2 29251060 29251350 -224005233 + AluSq SINE Alu 1 292 -21 186 43 0 0 chr2 29251357 29251380 -224005203 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 1840 168 13 3 chr2 29251528 29251837 -224004746 + AluJb SINE Alu 1 312 0 273 278 33 61 chr2 29252006 29252186 -224004397 - MER89 LTR ERV1 -20 539 365 906 281 192 39 chr2 29252727 29252853 -224003730 - L2 LINE L2 0 3272 3167 220 0 0 79 chr2 29252853 29252891 -224003692 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2054 117 7 0 chr2 29252901 29253174 -224003409 - AluJo SINE Alu -36 276 2 906 281 192 39 chr2 29253174 29254279 -224002304 - L2 LINE L2 -112 3160 1842 204 333 73 10 chr2 29254672 29254768 -224001815 + MIR SINE MIR 16 117 -145 1138 139 0 0 chr2 29254939 29255104 -224001479 + AluJb SINE Alu 5 169 -143 221 284 0 40 chr2 29255586 29255660 -224000923 + MIR3 SINE MIR 104 174 -34 232 319 0 11 chr2 29256188 29256279 -224000304 + MIR SINE MIR 168 257 -5 195 309 79 24 chr2 29256715 29256841 -223999742 - MIR3 SINE MIR -67 141 9 958 212 6 17 chr2 29257098 29257277 -223999306 + MER5B DNA MER1_type 1 177 -1 530 274 16 0 chr2 29257506 29257630 -223998953 - L2 LINE L2 0 3313 3188 202 293 0 37 chr2 29258015 29258097 -223998486 - L2 LINE L2 0 3272 3194 959 214 0 0 chr2 29258525 29258698 -223997885 + FAM SINE Alu 1 173 -12 423 239 74 25 chr2 29258968 29259131 -223997452 + MER112 DNA MER1_type 79 249 -11 1824 102 40 7 chr2 29259241 29259540 -223997043 - AluY SINE Alu 0 308 1 777 147 0 39 chr2 29259870 29259999 -223996584 + FLAM_C SINE Alu 2 125 -18 1691 154 42 11 chr2 29260870 29261156 -223995427 - AluJo SINE Alu -17 295 1 400 295 28 13 chr2 29261782 29261953 -223994630 - MIR SINE MIR -59 203 35 2263 80 0 26 chr2 29262646 29262958 -223993625 - AluSx SINE Alu -8 304 1 638 180 0 41 chr2 29263032 29263154 -223993429 + MER63 DNA MER1_type 40 782 -54 474 275 94 0 chr2 29263210 29263359 -223993224 + MIR SINE MIR 100 262 0 343 294 25 34 chr2 29264054 29264173 -223992410 - MIR SINE MIR -70 192 75 210 303 0 15 chr2 29264187 29264253 -223992330 + CT-rich Low_complexity Low_complexity 2 66 0 29 0 0 0 chr2 29264613 29264642 -223991941 + AT_rich Low_complexity Low_complexity 1 29 0 207 255 0 0 chr2 29265800 29265847 -223990736 + (CACG)n Simple_repeat Simple_repeat 1 47 0 1525 195 3 10 chr2 29267515 29267807 -223988776 + AluJo SINE Alu 1 290 -22 357 271 19 77 chr2 29269215 29269370 -223987213 - MIR3 SINE MIR -21 187 42 352 264 118 0 chr2 29269914 29270024 -223986559 + MIR3 SINE MIR 38 160 -48 296 310 21 56 chr2 29270034 29270176 -223986407 + MER5B DNA MER1_type 22 158 -20 504 160 0 0 chr2 29270508 29270583 -223986000 - AluS SINE Alu -235 77 3 1038 241 34 15 chr2 29270590 29270852 -223985731 - L1M4 LINE L1 -1159 4987 4721 1898 157 7 0 chr2 29270887 29271193 -223985390 - AluJo SINE Alu -4 308 1 211 68 0 45 chr2 29272688 29272732 -223983851 + (CA)n Simple_repeat Simple_repeat 2 43 0 447 19 0 0 chr2 29273331 29273383 -223983200 + (TG)n Simple_repeat Simple_repeat 2 53 0 1834 146 0 0 chr2 29273529 29273809 -223982774 + AluJo SINE Alu 5 284 -28 366 298 43 22 chr2 29273882 29274016 -223982567 - MIR SINE MIR -62 146 30 317 298 10 19 chr2 29274595 29274699 -223981884 - MIR SINE MIR -109 153 51 1897 180 24 18 chr2 29274857 29275240 -223981343 + MLT1B LTR MaLR 6 390 0 204 240 20 0 chr2 29275268 29275318 -223981265 + L2 LINE L2 3262 3312 -1 217 280 43 21 chr2 29276157 29276250 -223980333 + MIR SINE MIR 39 133 -129 251 246 39 101 chr2 29276565 29276744 -223979839 + L2 LINE L2 2887 3054 -218 223 146 49 0 chr2 29276761 29276802 -223979781 + (TCTG)n Simple_repeat Simple_repeat 3 45 0 240 313 148 0 chr2 29276868 29276983 -223979600 + L2 LINE L2 3137 3268 -4 279 241 81 23 chr2 29277391 29277478 -223979105 + L2 LINE L2 3159 3250 -22 499 196 47 0 chr2 29277481 29277588 -223978995 + MER94 DNA DNA 2 113 -21 267 103 0 0 chr2 29277599 29277638 -223978945 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 477 317 80 15 chr2 29277872 29278071 -223978512 - MIR SINE MIR -33 229 18 239 337 20 0 chr2 29279041 29279142 -223977441 + MER94 DNA DNA 6 108 -26 255 170 0 0 chr2 29280168 29280215 -223976368 + (TG)n Simple_repeat Simple_repeat 1 47 0 777 231 20 45 chr2 29280759 29280958 -223975625 + MIR SINE MIR 19 212 -50 446 262 41 0 chr2 29281078 29281200 -223975383 - L2 LINE L2 -6 3307 3181 4301 178 71 6 chr2 29281332 29282108 -223974475 + LTR1B LTR ERV1 1 826 0 365 238 0 12 chr2 29282201 29282281 -223974302 - MIR SINE MIR -118 144 66 544 280 192 12 chr2 29282284 29282534 -223974049 - L2 LINE L2 -4 3309 3015 2342 169 42 6 chr2 29282750 29283250 -223973333 - L1MC1 LINE L1 0 6333 5772 1971 152 19 36 chr2 29283250 29283611 -223972972 + THE1A LTR MaLR 1 355 0 2342 169 42 6 chr2 29283611 29283660 -223972923 - L1MC1 LINE L1 -561 5772 5726 1527 171 42 9 chr2 29284255 29284555 -223972028 + L1MB3 LINE L1 5749 6037 -146 2385 89 27 0 chr2 29284555 29284878 -223971705 + L1PA13 LINE L1 5819 6163 0 735 161 42 7 chr2 29284878 29285006 -223971577 + L1MB3 LINE L1 6036 6183 0 406 257 62 0 chr2 29285012 29285125 -223971458 - LTR23 LTR ERV1 -23 414 295 416 65 0 0 chr2 29285126 29285188 -223971395 - Alu SINE Alu -2 308 247 1268 84 39 0 chr2 29285188 29285367 -223971216 + L1PA13 LINE L1 5978 6163 0 735 161 42 7 chr2 29285367 29285495 -223971088 + L1MB3 LINE L1 6036 6183 0 406 257 62 0 chr2 29285501 29285614 -223970969 - LTR23 LTR ERV1 -23 414 295 700 93 0 0 chr2 29285615 29285712 -223970871 - AluSg/x SINE Alu -2 307 211 316 290 30 0 chr2 29285840 29285940 -223970643 - MIR3 SINE MIR -45 163 61 543 250 181 0 chr2 29286872 29287032 -223969551 - MIR SINE MIR -25 237 49 323 298 19 0 chr2 29287900 29288004 -223968579 + L2 LINE L2 2958 3063 -209 1907 203 78 50 chr2 29288400 29288884 -223967699 + MLT1D LTR MaLR 8 505 0 443 287 144 33 chr2 29288923 29288981 -223967602 - MIR SINE MIR -2 260 210 1888 188 28 38 chr2 29288981 29289375 -223967208 - MLT1B LTR MaLR 0 390 1 443 287 144 33 chr2 29289375 29289497 -223967086 - MIR SINE MIR -52 210 60 272 153 3 43 chr2 29289497 29289566 -223967017 - L1P LINE L1 -792 5354 5284 477 50 0 0 chr2 29290421 29290481 -223966102 + (CA)n Simple_repeat Simple_repeat 2 61 0 467 243 0 28 chr2 29290705 29290812 -223965771 - L3 LINE CR1 -59 1518 1415 311 254 136 27 chr2 29291267 29291377 -223965206 + MIR SINE MIR 70 191 -71 207 143 0 0 chr2 29291956 29291991 -223964592 - MIR3 SINE MIR -46 162 128 183 129 0 0 chr2 29294535 29294566 -223962017 + (CAGGG)n Simple_repeat Simple_repeat 4 34 0 570 333 35 53 chr2 29296325 29296398 -223960185 - L3 LINE CR1 -20 1557 1484 1497 218 128 37 chr2 29296398 29296857 -223959726 - MLT1D LTR MaLR -4 501 1 570 333 35 53 chr2 29296857 29297065 -223959518 - L3 LINE CR1 -93 1484 1281 473 186 103 0 chr2 29297267 29297364 -223959219 - MER103 DNA DNA -49 117 11 423 0 0 0 chr2 29297876 29297923 -223958660 + (CA)n Simple_repeat Simple_repeat 2 48 0 218 276 293 9 chr2 29298339 29298455 -223958128 - MIR SINE MIR -14 248 100 590 294 0 12 chr2 29299045 29299215 -223957368 + MIR3 SINE MIR 36 203 -5 181 262 0 0 chr2 29299428 29299470 -223957113 - MIR SINE MIR -65 197 156 492 324 14 12 chr2 29299627 29299799 -223956784 - MIR SINE MIR -69 139 16 265 231 78 24 chr2 29299832 29299947 -223956636 - MIR SINE MIR -72 136 18 232 250 0 0 chr2 29299985 29300037 -223956546 + CT-rich Low_complexity Low_complexity 1 52 0 663 54 0 0 chr2 29300747 29300839 -223955744 + (TG)n Simple_repeat Simple_repeat 2 93 0 693 247 68 54 chr2 29300862 29301091 -223955492 - L1ME3A LINE L1 -10 6160 5925 2172 82 7 7 chr2 29301091 29301383 -223955200 + AluSg SINE Alu 1 292 -18 693 247 68 54 chr2 29301383 29301449 -223955134 - L1ME3A LINE L1 -245 5925 5861 304 300 9 27 chr2 29301455 29301565 -223955018 - L1MC4 LINE L1 -1330 6712 6605 333 286 10 31 chr2 29301613 29301809 -223954774 - L1MC5 LINE L1 -178 7783 7592 333 340 20 50 chr2 29302046 29302246 -223954337 - L3 LINE CR1 -171 1406 1213 2432 81 0 0 chr2 29302669 29302978 -223953605 + AluSg SINE Alu 1 309 -1 738 300 27 9 chr2 29303022 29303245 -223953338 - MLT1K LTR MaLR -11 577 351 713 239 58 66 chr2 29303276 29303519 -223953064 - MLT1K LTR MaLR -305 283 43 754 227 52 35 chr2 29303547 29303776 -223952807 + MIR SINE MIR 29 261 -1 261 313 27 53 chr2 29304209 29304359 -223952224 - MIR3 SINE MIR -47 161 16 210 194 56 42 chr2 29305601 29305673 -223950910 + CT-rich Low_complexity Low_complexity 5 77 0 299 314 141 6 chr2 29305911 29306067 -223950516 + MIR SINE MIR 72 248 -14 27 62 0 0 chr2 29306537 29306585 -223949998 + GC_rich Low_complexity Low_complexity 1 48 0 247 219 164 0 chr2 29307416 29307489 -223949094 - MIR SINE MIR -55 153 69 186 319 55 22 chr2 29307500 29307591 -223948992 - MIR SINE MIR -59 203 110 507 254 98 23 chr2 29307679 29307852 -223948731 - MIR3 SINE MIR -22 186 1 21 0 0 0 chr2 29307958 29307979 -223948604 + AT_rich Low_complexity Low_complexity 1 21 0 27 92 0 0 chr2 29308194 29308270 -223948313 + GC_rich Low_complexity Low_complexity 1 76 0 231 172 17 17 chr2 29308928 29308986 -223947597 + CT-rich Low_complexity Low_complexity 2 59 0 195 100 0 0 chr2 29309119 29309149 -223947434 + (CGAG)n Simple_repeat Simple_repeat 1 30 0 261 83 0 0 chr2 29309164 29309200 -223947383 + (GA)n Simple_repeat Simple_repeat 2 37 0 441 0 0 0 chr2 29312597 29312646 -223943937 + (CA)n Simple_repeat Simple_repeat 2 50 0 342 24 0 0 chr2 29312987 29313029 -223943554 + L1PA6 LINE L1 6106 6147 -7 738 268 33 47 chr2 29313453 29313729 -223942854 - MARNA DNA Mariner -49 537 266 914 213 137 0 chr2 29315552 29315749 -223940834 + MER58A DNA MER1_type 1 224 0 183 80 0 0 chr2 29316923 29316948 -223939635 + (ATGGTG)n Simple_repeat Simple_repeat 6 30 0 585 276 5 43 chr2 29316966 29317151 -223939432 + MER5B DNA MER1_type 1 178 0 225 312 172 6 chr2 29317172 29317329 -223939254 - MIR SINE MIR -57 205 23 658 298 78 8 chr2 29318534 29318776 -223937807 + MIR SINE MIR 4 262 0 248 297 0 0 chr2 29320314 29320388 -223936195 + MIR SINE MIR 77 150 -112 282 304 108 57 chr2 29320956 29321150 -223935433 - MIR3 SINE MIR 0 208 5 2253 104 0 19 chr2 29321819 29322136 -223934447 - AluSx SINE Alu -1 311 1 593 271 6 57 chr2 29322193 29322370 -223934213 - MIR3 SINE MIR -32 176 9 225 331 58 61 chr2 29322960 29323271 -223933312 + L2 LINE L2 2963 3272 0 189 206 132 44 chr2 29323438 29323506 -223933077 - MIR3 SINE MIR -29 179 106 5666 82 113 95 chr2 29323506 29324981 -223931602 + pTR5 LTR ERV1 753 2438 0 1619 147 23 37 chr2 29324994 29325293 -223931290 + AluJo SINE Alu 1 295 -17 25 0 0 0 chr2 29325359 29325384 -223931199 + AT_rich Low_complexity Low_complexity 1 25 0 265 291 189 50 chr2 29325393 29325854 -223930729 + L2 LINE L2 1929 2453 -861 613 111 0 0 chr2 29325910 29326000 -223930583 - LTR12 LTR ERV1 0 714 625 364 206 76 92 chr2 29326000 29326131 -223930452 - LTR30 LTR ERV1 -71 723 544 718 173 129 7 chr2 29326252 29326391 -223930192 - LTR12 LTR ERV1 -549 165 10 215 236 85 38 chr2 29326391 29326497 -223930086 + L2 LINE L2 2551 2661 -653 247 329 0 24 chr2 29327227 29327312 -223929271 + L2 LINE L2 3187 3269 -3 252 305 76 34 chr2 29327505 29327623 -223928960 + L2 LINE L2 3191 3313 0 2262 101 0 0 chr2 29329320 29329627 -223926956 - AluSq SINE Alu -6 307 1 192 380 0 0 chr2 29330315 29330428 -223926155 + MIR3 SINE MIR 78 190 -18 2142 112 3 7 chr2 29330453 29330758 -223925825 + AluSx SINE Alu 1 304 -8 379 291 39 0 chr2 29330794 29330897 -223925686 - L2 LINE L2 -8 3305 3199 726 292 18 9 chr2 29331060 29331279 -223925304 + MIR SINE MIR 21 241 -21 232 118 0 0 chr2 29335279 29335313 -223921270 - L2 LINE L2 -29 3284 3251 25 0 0 0 chr2 29335942 29335967 -223920616 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr2 29336052 29336075 -223920508 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr2 29336537 29336558 -223920025 + (T)n Simple_repeat Simple_repeat 1 21 0 188 35 35 0 chr2 29336687 29336716 -223919867 + (TTG)n Simple_repeat Simple_repeat 2 31 0 1781 188 0 0 chr2 29337658 29337961 -223918622 - AluJb SINE Alu -9 303 1 396 305 14 31 chr2 29338014 29338190 -223918393 + MIR SINE MIR 20 198 -64 30 0 0 0 chr2 29338219 29338249 -223918334 + AT_rich Low_complexity Low_complexity 1 30 0 2186 119 0 0 chr2 29338288 29338598 -223917985 - AluSx SINE Alu -2 310 1 2237 101 0 16 chr2 29339823 29340141 -223916442 - AluSq SINE Alu 0 313 1 1368 149 16 29 chr2 29340686 29340928 -223915655 - L1MB5 LINE L1 -9 6165 5927 2119 129 3 0 chr2 29341146 29341457 -223915126 - AluSx SINE Alu 0 312 1 195 232 29 29 chr2 29341701 29341770 -223914813 - L2 LINE L2 -4 3309 3241 182 231 77 15 chr2 29341838 29341903 -223914680 - L2 LINE L2 -59 3254 3186 1881 156 0 7 chr2 29342029 29342336 -223914247 + AluJb SINE Alu 1 305 -7 293 282 29 19 chr2 29342512 29342615 -223913968 - L2 LINE L2 -2 3311 3208 425 334 168 20 chr2 29343211 29343807 -223912776 + L2 LINE L2 1328 2011 -1303 195 316 125 20 chr2 29343830 29343982 -223912601 + L2 LINE L2 2461 2628 -686 1780 169 3 0 chr2 29344370 29344671 -223911912 + AluJo SINE Alu 1 302 -10 1879 173 5 40 chr2 29344672 29345047 -223911536 + L1MC1 LINE L1 5526 5887 -446 1269 175 0 9 chr2 29345047 29345254 -223911329 + L1MC1 LINE L1 6118 6332 -1 1324 149 8 25 chr2 29345258 29345493 -223911090 + AluJb SINE Alu 77 307 -5 199 289 11 67 chr2 29345578 29345668 -223910915 - MIR3 SINE MIR -49 159 75 225 256 103 0 chr2 29345709 29345787 -223910796 + MIR SINE MIR 107 192 -70 620 247 86 6 chr2 29346238 29346400 -223910183 + MIR SINE MIR 23 197 -65 833 162 14 7 chr2 29346508 29346656 -223909927 - AluJo SINE Alu -163 149 1 23 0 0 0 chr2 29346663 29346686 -223909897 + AT_rich Low_complexity Low_complexity 1 23 0 204 239 0 0 chr2 29347508 29347554 -223909029 - L2 LINE L2 0 3272 3227 184 327 0 0 chr2 29347593 29347645 -223908938 - L2 LINE L2 0 3272 3221 565 283 151 4 chr2 29347933 29348191 -223908392 - L2 LINE L2 -22 3291 2996 2056 119 0 3 chr2 29348989 29349317 -223907266 - AluSx SINE Alu 0 312 4 255 103 0 0 chr2 29350402 29350441 -223906142 + (TCC)n Simple_repeat Simple_repeat 1 39 0 204 246 154 18 chr2 29350856 29350966 -223905617 + MIR3 SINE MIR 3 127 -81 760 222 153 24 chr2 29351647 29351703 -223904880 + MER46C DNA MER2_type 4 51 -287 2365 72 0 3 chr2 29351703 29352008 -223904575 - AluSg SINE Alu -6 304 1 760 222 153 24 chr2 29352008 29352239 -223904344 + MER46C DNA MER2_type 51 328 -10 503 270 176 18 chr2 29352246 29352468 -223904115 - MIR SINE MIR -2 260 4 288 200 53 13 chr2 29352468 29352540 -223904043 - MIR SINE MIR -73 135 61 180 323 195 22 chr2 29353086 29353312 -223903271 - L2 LINE L2 -3 3269 3005 1941 102 30 49 chr2 29353732 29354036 -223902547 - AluSx SINE Alu -14 298 1 2150 175 28 28 chr2 29354056 29354428 -223902155 + L1PA16 LINE L1 5767 6141 -25 2133 91 3 36 chr2 29354428 29354735 -223901848 - AluSx SINE Alu -15 297 1 2150 175 28 28 chr2 29354735 29354762 -223901821 + L1PA16 LINE L1 6140 6166 0 232 282 70 50 chr2 29354792 29354937 -223901646 + L1MC5 LINE L1 7676 7829 -132 2020 154 0 0 chr2 29354937 29355242 -223901341 + AluJo SINE Alu 1 305 -7 232 282 70 50 chr2 29355242 29355337 -223901246 + L1MC5 LINE L1 7829 7921 -40 331 328 61 32 chr2 29355523 29355770 -223900813 + L2 LINE L2 2414 2667 -647 189 364 56 19 chr2 29357426 29357588 -223898995 + L2 LINE L2 2851 3018 -254 432 253 95 32 chr2 29357681 29357839 -223898744 + MIR SINE MIR 9 176 -86 2164 104 7 0 chr2 29357860 29358159 -223898424 - AluY SINE Alu -10 301 1 2071 86 79 0 chr2 29358159 29358438 -223898145 - AluSq SINE Alu -8 305 5 264 356 37 21 chr2 29359054 29359245 -223897338 + MIR SINE MIR 35 228 -34 226 324 124 28 chr2 29361132 29361277 -223895306 - MIR3 SINE MIR -9 199 41 364 318 9 0 chr2 29361761 29361871 -223894712 + MIR3 SINE MIR 76 187 -21 1828 173 7 0 chr2 29362035 29362335 -223894248 + AluJo SINE Alu 1 302 -10 753 265 146 0 chr2 29362651 29362870 -223893713 + MIR SINE MIR 2 252 -10 285 29 0 0 chr2 29362871 29362905 -223893678 + (TTCA)n Simple_repeat Simple_repeat 2 35 0 441 326 83 38 chr2 29365014 29365327 -223891256 + MLT1K LTR MaLR 10 336 -252 1774 242 35 24 chr2 29365337 29365799 -223890784 + MLT1C LTR MaLR 1 467 0 2074 137 0 3 chr2 29417441 29417761 -223838822 + AluSx SINE Alu 1 319 0 2313 110 0 0 chr2 29418403 29418702 -223837881 + AluSx SINE Alu 1 299 -13 271 311 133 39 chr2 29418925 29419105 -223837478 + MIR SINE MIR 46 242 -20 195 294 88 15 chr2 29420249 29420317 -223836266 + MIR SINE MIR 46 118 -144 261 296 63 35 chr2 29422018 29422160 -223834423 + MIR SINE MIR 4 141 -67 250 346 68 6 chr2 29423222 29423384 -223833199 + L3b LINE CR1 1313 1484 -99 1903 166 3 10 chr2 29423474 29423782 -223832801 + AluJb SINE Alu 5 310 -2 757 213 13 0 chr2 29425177 29425327 -223831256 - MER5A DNA MER1_type -2 187 36 1578 72 0 10 chr2 29425958 29426153 -223830430 - AluSc SINE Alu -1 308 116 2257 115 0 10 chr2 29426724 29427029 -223829554 - AluSx SINE Alu -10 302 1 2141 118 0 41 chr2 29427079 29427393 -223829190 - AluSg SINE Alu -9 301 1 695 306 46 0 chr2 29428180 29428396 -223828187 + MIR SINE MIR 37 262 0 183 289 0 0 chr2 29428416 29428461 -223828122 - L2 LINE L2 0 3272 3228 * 229 164 18 91 chr2 29428436 29428491 -223828092 + L2 LINE L2 3171 3221 -92 208 216 0 0 chr2 29428517 29428554 -223828029 + (TGGA)n Simple_repeat Simple_repeat 1 37 0 563 227 18 9 chr2 29428998 29429108 -223827475 - L2 LINE L2 0 3313 3203 366 322 116 22 chr2 29429111 29429378 -223827205 - L2 LINE L2 -577 2737 2446 198 225 0 0 chr2 29429737 29429777 -223826806 - MIR SINE MIR -10 252 213 197 156 31 0 chr2 29430325 29430357 -223826226 - L2 LINE L2 -94 3219 3187 308 218 26 64 chr2 29430795 29430873 -223825710 + L1MC4 LINE L1 6628 6702 -1340 1482 163 71 39 chr2 29430889 29431172 -223825411 - AluJo SINE Alu -20 292 1 2355 107 0 0 chr2 29431695 29431995 -223824588 - AluSx SINE Alu -12 300 1 238 161 0 71 chr2 29432209 29432265 -223824318 + L2 LINE L2 3262 3313 0 1883 150 27 0 chr2 29432412 29432706 -223823877 - AluJb SINE Alu 0 312 11 250 186 0 0 chr2 29434602 29434645 -223821938 - 5S rRNA rRNA -78 43 1 294 87 0 0 chr2 29434697 29434743 -223821840 + (TG)n Simple_repeat Simple_repeat 2 47 0 231 36 0 0 chr2 29435248 29435276 -223821307 + (TG)n Simple_repeat Simple_repeat 2 29 0 891 152 0 0 chr2 29435446 29435578 -223821005 - FLAM_C SINE Alu -1 132 1 574 138 21 0 chr2 29435583 29435677 -223820906 - FRAM SINE Alu -14 162 67 1196 141 10 26 chr2 29435750 29435942 -223820641 + MER5A DNA MER1_type 1 189 0 2207 98 0 0 chr2 29436294 29436579 -223820004 - AluSx SINE Alu -1 311 27 910 123 58 14 chr2 29437072 29437210 -223819373 + AluJb SINE Alu 156 299 -13 918 174 0 4 chr2 29437210 29437383 -223819200 + L1MB5 LINE L1 5823 5982 -192 183 238 124 97 chr2 29437513 29437811 -223818772 + L2 LINE L2 2964 3269 -44 3545 160 6 21 chr2 29437881 29438162 -223818421 + L1MB5 LINE L1 5551 5835 -339 1914 144 13 10 chr2 29438162 29438460 -223818123 + AluJb SINE Alu 1 299 -13 3545 160 6 21 chr2 29438460 29438810 -223817773 + L1MB5 LINE L1 5835 6173 -1 2369 97 0 0 chr2 29438815 29439113 -223817470 + AluSc SINE Alu 1 298 -11 209 222 28 130 chr2 29439894 29440002 -223816581 - MIR SINE MIR -73 135 39 376 287 44 55 chr2 29440457 29440511 -223816072 - MIR SINE MIR -78 184 131 1582 194 14 21 chr2 29440511 29440799 -223815784 + AluJo SINE Alu 1 286 -26 376 287 44 55 chr2 29440799 29440925 -223815658 - MIR SINE MIR -131 131 6 453 251 171 24 chr2 29442225 29442436 -223814147 + MIR SINE MIR 21 262 0 440 288 7 46 chr2 29442421 29442574 -223814009 - MIR SINE MIR -100 162 16 * 2375 72 0 7 chr2 29444012 29444304 -223812279 - AluSc SINE Alu 0 309 20 231 266 31 16 chr2 29445330 29445394 -223811189 - L2 LINE L2 -270 3002 2938 440 389 57 9 chr2 29445408 29445637 -223810946 - L3 LINE CR1 -58 1519 1280 6968 202 64 26 chr2 29446006 29446235 -223810348 + L1MB8 LINE L1 3209 3428 -2750 2609 67 0 3 chr2 29446235 29446547 -223810036 + AluY SINE Alu 1 311 0 6968 202 64 26 chr2 29446547 29447055 -223809528 + L1MB8 LINE L1 3428 3915 -2263 2041 143 7 0 chr2 29447055 29447356 -223809227 + AluSx SINE Alu 1 303 -9 6968 202 64 26 chr2 29447356 29449479 -223807104 + L1MB8 LINE L1 3915 6173 -5 5750 71 13 22 chr2 29450748 29450932 -223805651 - L1PB2 LINE L1 -2 6149 5965 2161 121 0 44 chr2 29450932 29451247 -223805336 - AluSx SINE Alu -11 301 1 5750 71 13 22 chr2 29451247 29451923 -223804660 - L1PB2 LINE L1 -186 5965 5297 1950 109 69 0 chr2 29452124 29452400 -223804183 - AluY SINE Alu -15 296 2 221 323 0 0 chr2 29452733 29452795 -223803788 - MIR SINE MIR -110 152 91 2262 114 0 0 chr2 29452998 29453288 -223803295 + AluSx SINE Alu 1 290 -22 449 153 0 0 chr2 29453218 29453290 -223803293 + AluS SINE Alu 221 292 -20 322 311 8 25 chr2 29453336 29453458 -223803125 - MIR3 SINE MIR -43 165 46 806 278 24 0 chr2 29453570 29453782 -223802801 - MIR SINE MIR -13 249 33 234 164 0 82 chr2 29453859 29453920 -223802663 + LTR65 LTR ERV1 259 314 -355 2195 134 3 0 chr2 29454110 29454409 -223802174 + AluSg SINE Alu 1 300 -10 263 284 58 103 chr2 29454857 29455100 -223801483 - L2 LINE L2 0 3272 3041 348 158 0 0 chr2 29455115 29455172 -223801411 + MER66B LTR ERV1 292 348 -138 236 226 118 11 chr2 29456812 29456905 -223799678 - L2 LINE L2 -38 3234 3132 2314 114 3 0 chr2 29456982 29457281 -223799302 + AluSx SINE Alu 1 300 -12 462 18 0 0 chr2 29458032 29458087 -223798496 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 2164 121 27 3 chr2 29458235 29458533 -223798050 + AluJb SINE Alu 1 305 -7 2097 146 78 43 chr2 29459681 29459739 -223796844 + Tigger4(Zombi) DNA MER2_type 1 55 -2676 2292 102 7 3 chr2 29459739 29460034 -223796549 - AluSx SINE Alu -16 296 1 2097 146 78 43 chr2 29460034 29460372 -223796211 + Tigger4(Zombi) DNA MER2_type 55 411 -2320 461 165 12 0 chr2 29460384 29460469 -223796114 + Tigger4(Zombi) DNA MER2_type 2646 2731 0 794 272 53 4 chr2 29461384 29461630 -223794953 + MIR SINE MIR 2 259 -3 2372 98 0 3 chr2 29461819 29462126 -223794457 - AluSx SINE Alu -6 306 1 2067 151 0 3 chr2 29463286 29463598 -223792985 - AluJb SINE Alu -1 311 1 2061 133 27 0 chr2 29463884 29464177 -223792406 + AluJb SINE Alu 2 302 -10 469 271 180 59 chr2 29464219 29464474 -223792109 - LTR67 LTR ERVL -263 294 9 2419 61 0 14 chr2 29465433 29465727 -223790856 + AluSg SINE Alu 1 290 -20 268 271 209 31 chr2 29468060 29468189 -223788394 + MER5B DNA MER1_type 2 153 -25 204 100 0 0 chr2 29468202 29468232 -223788351 + L3 LINE CR1 1543 1572 -5 200 198 35 23 chr2 29468909 29468995 -223787588 + CT-rich Low_complexity Low_complexity 3 89 0 445 229 41 41 chr2 29472029 29472151 -223784432 - MER103 DNA DNA -22 144 23 2529 66 0 3 chr2 29473531 29473833 -223782750 + AluY SINE Alu 1 301 -10 369 268 105 13 chr2 29474286 29474439 -223782144 + MIR SINE MIR 86 252 -10 2012 137 11 0 chr2 29476306 29476591 -223779992 - AluSx SINE Alu -24 288 1 1876 171 3 7 chr2 29476591 29476884 -223779699 - AluJb SINE Alu -17 295 4 564 323 7 48 chr2 29477507 29477776 -223778807 + L3 LINE CR1 1319 1576 -1 311 65 22 0 chr2 29478132 29478178 -223778405 + (CA)n Simple_repeat Simple_repeat 1 47 0 209 373 49 0 chr2 29479262 29479364 -223777219 + MER91C DNA MER1_type 34 140 0 205 231 0 0 chr2 29480116 29480155 -223776428 - MIR SINE MIR -21 241 203 299 287 195 20 chr2 29481623 29481818 -223774765 - MIR SINE MIR -2 260 32 360 322 46 15 chr2 29482862 29483110 -223773473 - MIR SINE MIR -3 259 1 1768 181 3 19 chr2 29485583 29485897 -223770686 - AluJo SINE Alu -3 309 1 305 260 24 55 chr2 29486629 29486756 -223769827 - L3 LINE CR1 -1 1576 1454 1143 92 0 0 chr2 29486775 29486939 -223769644 - L1PA8 LINE L1 -2 6170 6007 811 132 0 29 chr2 29486992 29487128 -223769455 - FLAM_C SINE Alu -1 132 1 197 300 180 34 chr2 29487234 29487467 -223769116 - L3 LINE CR1 -374 1203 937 280 329 45 19 chr2 29487485 29487640 -223768943 - L3 LINE CR1 -146 1431 1273 2341 91 0 19 chr2 29488536 29488845 -223767738 + AluY SINE Alu 1 303 -8 205 305 9 48 chr2 29489081 29489186 -223767397 + MIR SINE MIR 53 153 -55 1799 153 16 45 chr2 29489280 29489593 -223766990 - AluSx SINE Alu -6 306 3 1803 184 0 17 chr2 29489598 29489897 -223766686 - AluJo SINE Alu -13 299 6 831 319 66 7 chr2 29491512 29492107 -223764476 - L2 LINE L2 -8 3305 2664 227 305 85 34 chr2 29492368 29492486 -223764097 - L2 LINE L2 -1 3312 3189 2644 135 23 15 chr2 29492579 29493053 -223763530 + L1MA5 LINE L1 5821 6298 -2 408 159 0 0 chr2 29493086 29493155 -223763428 + MER5A DNA MER1_type 41 109 -80 26 64 0 0 chr2 29493911 29493958 -223762625 + AT_rich Low_complexity Low_complexity 1 47 0 1308 98 5 10 chr2 29495715 29495919 -223760664 - L1PA13 LINE L1 -1 6162 5960 209 301 72 0 chr2 29497856 29497939 -223758644 - MIR SINE MIR -168 94 6 210 217 22 0 chr2 29498522 29498568 -223758015 + (TTA)n Simple_repeat Simple_repeat 3 49 0 699 276 65 17 chr2 29498897 29499129 -223757454 + MIR SINE MIR 6 248 -14 191 291 44 76 chr2 29499209 29499284 -223757299 - L2 LINE L2 -1 3312 3236 2122 135 10 6 chr2 29499284 29499595 -223756988 + AluSq SINE Alu 1 312 -1 191 291 44 76 chr2 29499595 29499677 -223756906 - L2 LINE L2 -77 3236 3160 546 255 14 7 chr2 29499788 29499933 -223756650 - MIR3 SINE MIR -22 186 41 540 208 39 32 chr2 29500425 29500441 -223756142 - L1MA10 LINE L1 0 6334 6319 1205 238 34 47 chr2 29500441 29500497 -223756086 - L1ME1 LINE L1 -5 6161 6106 2024 120 21 7 chr2 29500497 29500780 -223755803 + AluJb SINE Alu 1 287 -25 1205 238 34 47 chr2 29500780 29501111 -223755472 - L1ME1 LINE L1 -60 6106 5783 333 329 43 31 chr2 29501239 29501400 -223755183 + L3b LINE CR1 1110 1272 -311 2504 87 0 0 chr2 29502663 29502973 -223753610 - AluSx SINE Alu -2 310 1 196 250 0 0 chr2 29504655 29504695 -223751888 - L2 LINE L2 -4 3268 3229 267 256 85 0 chr2 29505529 29505606 -223750977 + MIR SINE MIR 61 146 -62 400 147 11 105 chr2 29505634 29505729 -223750854 + MIR3 SINE MIR 97 182 -26 287 277 128 21 chr2 29506039 29506133 -223750450 + MIR3 SINE MIR 96 199 -9 517 239 26 8 chr2 29506219 29506336 -223750247 + MIR SINE MIR 64 182 -80 1001 191 6 0 chr2 29507685 29507858 -223748725 + FRAM SINE Alu 1 174 -2 1799 104 123 4 chr2 29509185 29509453 -223747130 + AluSg SINE Alu 1 300 0 265 278 194 37 chr2 29509982 29510173 -223746410 + MIR SINE MIR 31 251 -11 183 207 121 0 chr2 29511096 29511154 -223745429 + L3 LINE CR1 591 655 -922 1963 146 3 13 chr2 29511302 29511610 -223744973 + AluJb SINE Alu 1 305 -7 382 302 141 0 chr2 29512001 29512150 -223744433 - MIR3 SINE MIR -9 199 30 242 244 0 0 chr2 29512616 29512657 -223743926 + MER5B DNA MER1_type 3 43 -135 526 97 43 0 chr2 29512662 29512755 -223743828 + (TATG)n Simple_repeat Simple_repeat 2 98 0 2027 133 0 18 chr2 29512755 29513040 -223743543 - AluSx SINE Alu -32 280 1 1595 237 49 56 chr2 29513069 29513681 -223742902 + L1ME3A LINE L1 5558 6165 -5 2285 114 3 10 chr2 29513688 29513995 -223742588 + AluSq SINE Alu 1 305 -8 545 199 37 52 chr2 29514000 29514136 -223742447 - MER5B DNA MER1_type -44 134 1 249 296 105 42 chr2 29514136 29514565 -223742018 + L2 LINE L2 2660 3110 -162 1360 292 221 28 chr2 29514702 29515548 -223741035 - L2 LINE L2 0 3313 2632 1547 105 0 24 chr2 29515548 29515758 -223740825 + AluSg/x SINE Alu 92 296 -16 1360 292 221 28 chr2 29515758 29516304 -223740279 - L2 LINE L2 -681 2632 1628 2213 97 7 0 chr2 29518002 29518291 -223738292 + AluSx SINE Alu 1 291 -21 261 326 22 22 chr2 29518299 29518391 -223738192 - L2 LINE L2 -27 3245 3154 213 275 14 43 chr2 29520178 29520247 -223736336 - L2 LINE L2 0 3272 3206 527 178 68 0 chr2 29520678 29520796 -223735787 + L1MB5 LINE L1 6049 6174 0 188 248 88 88 chr2 29520866 29520979 -223735604 + MIR SINE MIR 46 158 -104 341 218 162 73 chr2 29521545 29521779 -223734804 + L1MEd LINE L1 467 721 -5398 328 264 34 0 chr2 29522337 29522424 -223734159 - MIR SINE MIR -33 175 83 2357 97 0 0 chr2 29522644 29522943 -223733640 - AluSx SINE Alu -12 300 2 1192 86 114 68 chr2 29523013 29523108 -223733475 - MER30 DNA MER1_type 0 230 141 198 0 0 0 chr2 29523108 29523130 -223733453 + (TG)n Simple_repeat Simple_repeat 1 22 0 1192 86 114 68 chr2 29523130 29523254 -223733329 - MER30 DNA MER1_type -89 141 1 455 236 110 0 chr2 29523565 29523692 -223732891 - MIR SINE MIR -6 256 116 2086 144 0 10 chr2 29523982 29524288 -223732295 - AluJb SINE Alu -9 303 1 1276 108 216 34 chr2 29524293 29524589 -223731994 - Tigger7 DNA MER2_type -22 2565 2216 284 214 0 0 chr2 29524585 29524641 -223731942 - Tigger7 DNA MER2_type -648 57 2 * 902 176 132 16 chr2 29524649 29524899 -223731684 + LTR37B LTR ERV1 6 284 -184 183 202 277 67 chr2 29525376 29525495 -223731088 + MIR SINE MIR 116 259 -3 954 220 23 0 chr2 29526136 29526309 -223730274 - MER45A DNA AcHobo -1 177 1 360 277 30 0 chr2 29526766 29526867 -223729716 + MIR SINE MIR 159 262 0 1792 208 184 123 chr2 29527168 29527223 -223729360 - Charlie7 DNA MER1_type -41 2571 2521 1919 147 41 32 chr2 29527223 29527354 -223729229 + MER2 DNA MER2_type 1 129 -215 1851 120 62 38 chr2 29527354 29527645 -223728938 - AluSq SINE Alu -15 298 1 1919 147 41 32 chr2 29527645 29527854 -223728729 + MER2 DNA MER2_type 129 344 0 1792 208 184 123 chr2 29527854 29528237 -223728346 - Charlie7 DNA MER1_type -91 2521 2163 2159 107 0 4 chr2 29528237 29528517 -223728066 - AluSg SINE Alu -31 279 1 1792 208 184 123 chr2 29528517 29529781 -223726802 - Charlie7 DNA MER1_type -449 2163 756 2205 120 0 7 chr2 29529781 29530081 -223726502 + AluSx SINE Alu 3 300 -12 1792 208 184 123 chr2 29530081 29530133 -223726450 - Charlie7 DNA MER1_type -1856 756 709 2298 111 3 0 chr2 29530318 29530624 -223725959 - AluSg SINE Alu -3 307 1 818 234 233 54 chr2 29530624 29531217 -223725366 - Charlie7 DNA MER1_type -1879 733 35 447 301 7 33 chr2 29532027 29532180 -223724403 + MER5A DNA MER1_type 13 161 -28 740 183 8 0 chr2 29532528 29532654 -223723929 + FLAM_C SINE Alu 1 127 -16 2161 138 0 19 chr2 29532772 29532951 -223723632 - AluSx SINE Alu 0 312 131 2310 114 0 9 chr2 29532951 29533266 -223723317 - AluSq SINE Alu -1 312 1 185 0 0 39 chr2 29533266 29533292 -223723291 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2157 117 7 0 chr2 29533292 29533575 -223723008 - AluSq SINE Alu -28 285 1 2161 138 0 19 chr2 29533575 29533711 -223722872 - AluSx SINE Alu -178 134 1 801 179 87 0 chr2 29534702 29534875 -223721708 - MER53 DNA DNA 0 189 2 2198 138 0 0 chr2 29534961 29535265 -223721318 + AluSx SINE Alu 1 304 -8 373 322 112 13 chr2 29535611 29535763 -223720820 + MIR SINE MIR 2 168 -94 1819 198 75 19 chr2 29535781 29536245 -223720338 - L1ME1 LINE L1 -211 5955 5466 401 319 43 0 chr2 29536245 29536361 -223720222 + MIR SINE MIR 21 141 -121 206 339 0 0 chr2 29537087 29537143 -223719440 - MER5A DNA MER1_type -71 118 63 855 161 0 22 chr2 29537152 29537289 -223719294 + AluJb SINE Alu 1 134 -178 22 0 0 0 chr2 29537329 29537351 -223719232 + AT_rich Low_complexity Low_complexity 1 22 0 467 290 53 38 chr2 29537390 29537521 -223719062 + MER5A DNA MER1_type 1 133 -56 1736 144 36 7 chr2 29537521 29537826 -223718757 - AluSx SINE Alu 0 313 1 2199 105 13 20 chr2 29537857 29538162 -223718421 + AluSx SINE Alu 1 303 -9 405 261 63 14 chr2 29538394 29538536 -223718047 - MER103 DNA DNA -4 162 14 346 242 30 68 chr2 29539319 29539451 -223717132 + MIR SINE MIR 70 196 -66 415 324 68 0 chr2 29539930 29540078 -223716505 + MIR SINE MIR 13 170 -92 231 310 42 0 chr2 29540632 29540703 -223715880 + MER5A DNA MER1_type 116 189 0 348 271 146 0 chr2 29540790 29540886 -223715697 - L2 LINE L2 -5 3308 3199 1923 156 190 46 chr2 29541104 29541604 -223714979 + LTR18B LTR ERVL 1 572 -42 362 105 12 93 chr2 29541597 29541683 -223714900 + LTR18A LTR ERVL 279 357 0 * 195 175 32 16 chr2 29541715 29541778 -223714805 + CT-rich Low_complexity Low_complexity 4 67 0 3439 81 32 6 chr2 29542732 29543201 -223713382 - L1PA10 LINE L1 -16 6152 5672 306 276 82 41 chr2 29543401 29543571 -223713012 - MIR SINE MIR -75 187 11 2596 72 3 0 chr2 29544731 29545038 -223711545 + AluSg SINE Alu 1 308 -2 855 158 82 0 chr2 29545570 29545716 -223710867 - MER5A DNA MER1_type -29 160 3 924 82 0 0 chr2 29546183 29546293 -223710290 - AluSq/x SINE Alu -203 110 1 243 247 0 49 chr2 29546295 29546376 -223710207 + MLT1J LTR MaLR 429 505 -6 1145 150 0 0 chr2 29546595 29546762 -223709821 + AluSg/x SINE Alu 134 300 -12 974 158 228 0 chr2 29546909 29547150 -223709433 + L1MB2 LINE L1 5835 6130 -41 1867 143 0 21 chr2 29547150 29547436 -223709147 + AluSx SINE Alu 1 280 -32 217 331 43 31 chr2 29548815 29548978 -223707605 - L2 LINE L2 -1285 2029 1865 254 214 0 0 chr2 29548981 29549023 -223707560 + MER91B DNA MER1_type 1 42 -148 2345 99 21 51 chr2 29549045 29549221 -223707362 + THE1B LTR MaLR 1 181 -183 2313 90 16 16 chr2 29549221 29549544 -223707039 + L1PA10 LINE L1 5846 6168 0 2345 99 21 51 chr2 29549544 29549742 -223706841 + THE1B LTR MaLR 181 364 0 520 237 35 0 chr2 29549754 29549868 -223706715 + MER91B DNA MER1_type 73 190 0 1562 216 58 21 chr2 29549959 29550339 -223706244 - MLT1F1 LTR MaLR 0 567 174 300 200 0 0 chr2 29550339 29550404 -223706179 + G-rich Low_complexity Low_complexity 1 65 0 523 252 57 25 chr2 29550413 29550572 -223706011 - MLT1F1 LTR MaLR -369 173 10 249 307 67 0 chr2 29551802 29551877 -223704706 + L2 LINE L2 3168 3247 -25 1909 147 7 23 chr2 29552110 29552417 -223704166 + AluJo SINE Alu 11 312 0 368 299 21 0 chr2 29552463 29552560 -223704023 + L2 LINE L2 3168 3266 -6 524 229 0 89 chr2 29552905 29553062 -223703521 + MIR3 SINE MIR 66 208 0 315 308 90 14 chr2 29553291 29553429 -223703154 + MIR3 SINE MIR 3 151 -69 2226 83 21 0 chr2 29553590 29553880 -223702703 - AluSq SINE Alu -17 296 1 379 271 0 9 chr2 29553999 29554106 -223702477 + MIR SINE MIR 59 164 -98 325 263 158 30 chr2 29554470 29554603 -223701980 + MER91A DNA MER1_type 37 186 -10 868 177 78 5 chr2 29556061 29556253 -223700330 - MER115 DNA AcHobo -8 685 480 703 262 11 47 chr2 29556315 29556506 -223700077 - MER115 DNA AcHobo -324 369 186 593 174 0 0 chr2 29556593 29556685 -223699898 + FRAM SINE Alu 1 92 -84 519 290 16 0 chr2 29556686 29556810 -223699773 - MER115 DNA AcHobo -516 177 52 659 148 0 0 chr2 29556839 29556940 -223699643 + FRAM SINE Alu 55 155 -21 1670 142 3 71 chr2 29557014 29557338 -223699245 + AluJb SINE Alu 1 302 -10 355 257 270 0 chr2 29557415 29557563 -223699020 + MIR SINE MIR 73 260 -2 336 319 75 27 chr2 29558016 29558204 -223698379 - MIR SINE MIR -1 261 65 557 282 97 5 chr2 29559868 29560063 -223696520 + MIR SINE MIR 46 258 -4 220 258 16 0 chr2 29560146 29560208 -223696375 + MIR SINE MIR 188 250 -12 504 136 123 0 chr2 29560845 29560926 -223695657 + 5S rRNA rRNA 1 91 -30 2563 137 54 5 chr2 29562432 29562840 -223693743 + MSTA LTR MaLR 1 428 0 271 295 0 0 chr2 29563021 29563082 -223693501 + L2 LINE L2 2424 2484 -830 260 301 66 71 chr2 29563194 29563333 -223693250 + L2 LINE L2 3075 3214 -58 2119 101 7 0 chr2 29563333 29563630 -223692953 - AluSx SINE Alu -13 299 1 260 301 66 71 chr2 29563630 29563686 -223692897 + L2 LINE L2 3214 3269 -3 633 277 11 113 chr2 29564024 29564298 -223692285 - MIR SINE MIR -5 257 12 247 226 202 45 chr2 29564521 29564674 -223691909 + MIR3 SINE MIR 20 204 -4 1916 156 0 7 chr2 29565043 29565350 -223691233 + AluSx SINE Alu 1 305 -7 268 225 50 38 chr2 29565516 29565596 -223690987 + MIR SINE MIR 123 203 -59 1956 131 60 35 chr2 29565665 29566031 -223690552 - THE1C LTR MaLR 0 375 1 1050 171 11 11 chr2 29566336 29566512 -223690071 - MER58A DNA MER1_type -3 221 46 1610 201 3 0 chr2 29566512 29566816 -223689767 + AluJo SINE Alu 1 305 -7 976 152 6 12 chr2 29566817 29566988 -223689595 + AluJo/FRAM SINE Alu 132 301 -11 2153 106 0 10 chr2 29567072 29567375 -223689208 - AluSx SINE Alu -12 300 1 2262 101 3 0 chr2 29567386 29567693 -223688890 - AluSx SINE Alu -4 308 1 317 160 0 0 chr2 29567838 29567888 -223688695 + Tigger5 DNA MER2_type 1 50 -2273 465 239 0 0 chr2 29567929 29568017 -223688566 - Tigger5 DNA MER2_type -2235 88 1 498 207 0 0 chr2 29568028 29568115 -223688468 + Tigger5 DNA MER2_type 2237 2323 0 420 212 119 42 chr2 29568122 29568133 -223688450 - MIR SINE MIR -89 173 164 2106 120 10 0 chr2 29568133 29568441 -223688142 - AluSx SINE Alu -1 311 1 420 212 119 42 chr2 29568441 29568547 -223688036 - MIR SINE MIR -98 164 47 234 62 0 0 chr2 29569189 29569221 -223687362 + (CA)n Simple_repeat Simple_repeat 2 33 0 1202 284 88 10 chr2 29570035 29570514 -223686069 - LTR33A LTR ERVL -6 517 2 551 344 99 32 chr2 29570798 29571173 -223685410 - L2 LINE L2 -49 3223 2824 1836 203 46 3 chr2 29571250 29571600 -223684983 - MLT1A1 LTR MaLR 0 365 1 1772 101 12 0 chr2 29571641 29571923 -223684660 + AluSx SINE Alu 32 316 0 264 277 0 0 chr2 29572090 29572173 -223684410 + GA-rich Low_complexity Low_complexity 2 84 0 1458 168 50 26 chr2 29572730 29573033 -223683550 + AluJo SINE Alu 1 310 -2 923 148 12 6 chr2 29573507 29573669 -223682914 + FRAM SINE Alu 1 162 -14 3791 139 17 16 chr2 29573851 29574482 -223682101 + L1MB3 LINE L1 5552 6183 0 268 235 0 122 chr2 29574806 29574867 -223681716 + MIR SINE MIR 65 111 -151 885 149 0 8 chr2 29574867 29575001 -223681582 - FLAM_C SINE Alu 0 133 1 268 235 0 122 chr2 29575001 29575037 -223681546 + MIR SINE MIR 111 150 -112 413 81 16 0 chr2 29575075 29575137 -223681446 + (TCC)n Simple_repeat Simple_repeat 1 63 0 790 237 48 5 chr2 29575137 29575323 -223681260 - AluJo SINE Alu -1 311 118 223 419 22 7 chr2 29575406 29575542 -223681041 - MIR3 SINE MIR -62 146 9 546 255 103 0 chr2 29575610 29575755 -223680828 + MIR SINE MIR 20 179 -83 1823 164 3 19 chr2 29575838 29576197 -223680386 + AluJo SINE Alu 1 354 0 1995 123 7 10 chr2 29576200 29576508 -223680075 + AluSx SINE Alu 1 307 -5 1931 114 0 0 chr2 29577405 29577668 -223678915 + AluSx SINE Alu 20 282 -30 234 0 0 0 chr2 29577670 29577696 -223678887 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 616 288 61 10 chr2 29577834 29578032 -223678551 + MIR SINE MIR 49 256 -6 2484 58 0 0 chr2 29578174 29578482 -223678101 + AluY SINE Alu 1 308 -3 1958 139 0 13 chr2 29578727 29579030 -223677553 + AluJb SINE Alu 1 299 -13 233 367 25 25 chr2 29579616 29579736 -223676847 + L2 LINE L2 3183 3302 -11 1187 224 94 63 chr2 29579933 29580008 -223676575 - MLT1D LTR MaLR 0 505 434 1930 114 47 0 chr2 29580008 29580305 -223676278 + AluSx SINE Alu 1 311 -1 1187 224 94 63 chr2 29580305 29580719 -223675864 - MLT1D LTR MaLR -71 434 1 1767 160 3 0 chr2 29580747 29581040 -223675543 + AluSx SINE Alu 1 294 -18 473 289 200 6 chr2 29581431 29581611 -223674972 - MIR SINE MIR -40 222 8 467 266 55 16 chr2 29582176 29582304 -223674279 - MIR3 SINE MIR -53 155 23 300 335 30 68 chr2 29582465 29582701 -223673882 + L2 LINE L2 2967 3193 -79 1713 176 113 93 chr2 29583141 29583268 -223673315 + MLT1D LTR MaLR 1 124 -381 1584 119 0 58 chr2 29583268 29583529 -223673054 + AluJb SINE Alu 43 288 -24 1713 176 113 93 chr2 29583529 29583636 -223672947 + MLT1D LTR MaLR 124 227 -278 222 37 0 0 chr2 29583636 29583663 -223672920 + (CA)n Simple_repeat Simple_repeat 2 28 0 * 540 0 0 0 chr2 29583662 29583722 -223672861 + (GA)n Simple_repeat Simple_repeat 2 61 0 1713 176 113 93 chr2 29583663 29583981 -223672602 + MLT1D LTR MaLR 227 505 0 638 239 105 47 chr2 29584108 29584330 -223672253 - MIR SINE MIR -2 260 7 475 242 32 24 chr2 29584409 29584533 -223672050 - MIR SINE MIR -16 246 122 1438 173 83 0 chr2 29585391 29585669 -223670914 + AluJb SINE Alu 1 301 -11 449 252 154 14 chr2 29585669 29585812 -223670771 + MIR3 SINE MIR 27 189 -19 1940 104 0 85 chr2 29586569 29586897 -223669686 - AluSx SINE Alu -12 300 1 620 254 149 31 chr2 29587275 29587503 -223669080 - MIR SINE MIR 0 262 8 270 302 47 47 chr2 29587498 29587627 -223668956 + L2 LINE L2 3138 3266 -6 * 449 147 368 0 chr2 29588247 29588342 -223668241 - FLAM_C SINE Alu -3 130 1 482 43 159 0 chr2 29588420 29588489 -223668094 + MADE1 DNA Mariner 1 80 0 2001 79 0 0 chr2 29588804 29589069 -223667514 + AluY SINE Alu 41 305 -6 536 292 52 26 chr2 29589290 29589460 -223667123 - MIR SINE MIR -48 214 50 2008 111 0 7 chr2 29589460 29589775 -223666808 + AluSx SINE Alu 5 317 0 536 292 52 26 chr2 29589775 29589788 -223666795 - MIR SINE MIR -212 50 39 356 73 36 0 chr2 29589788 29589843 -223666740 + L1MA6 LINE L1 6244 6300 0 246 192 0 39 chr2 29589882 29589934 -223666649 - MIR SINE MIR -208 54 5 21 0 0 0 chr2 29590010 29590031 -223666552 + AT_rich Low_complexity Low_complexity 1 21 0 2172 106 0 10 chr2 29590184 29590487 -223666096 + AluSq SINE Alu 1 300 -13 731 157 0 0 chr2 29590790 29590911 -223665672 - FLAM_C SINE Alu 0 143 23 526 332 44 22 chr2 29591065 29591339 -223665244 + L1MEc LINE L1 2120 2399 -3997 1395 182 91 0 chr2 29591345 29591609 -223664974 + AluJo SINE Alu 1 288 -24 24 0 0 0 chr2 29591610 29591634 -223664949 + AT_rich Low_complexity Low_complexity 1 24 0 820 181 22 22 chr2 29591634 29591816 -223664767 + FRAM SINE Alu 1 176 0 318 300 25 33 chr2 29591816 29591936 -223664647 + L1MEc LINE L1 2363 2481 -3734 2170 79 3 0 chr2 29591947 29592238 -223664345 + AluY SINE Alu 1 292 -19 341 260 80 20 chr2 29592391 29592491 -223664092 - L2 LINE L2 -12 3301 3196 2093 104 3 7 chr2 29592542 29592840 -223663743 - AluSc SINE Alu -12 297 1 419 280 10 10 chr2 29594314 29594414 -223662169 - L2 LINE L2 -14 3299 3200 359 311 44 27 chr2 29594420 29594603 -223661980 - L2 LINE L2 -252 3061 2876 1780 122 70 0 chr2 29594671 29594941 -223661642 + AluSx SINE Alu 1 289 -23 207 0 0 0 chr2 29594941 29594964 -223661619 + (GA)n Simple_repeat Simple_repeat 2 24 0 2466 47 0 0 chr2 29595102 29595398 -223661185 - AluY SINE Alu -15 296 1 1874 136 0 23 chr2 29595683 29595991 -223660592 + AluSx SINE Alu 1 301 -11 1846 159 3 3 chr2 29596297 29596605 -223659978 - AluSx SINE Alu -4 308 1 209 328 16 0 chr2 29596680 29596744 -223659839 + L3 LINE CR1 1297 1361 -216 1920 129 20 0 chr2 29596775 29597069 -223659514 + AluSq SINE Alu 1 300 -13 193 125 31 0 chr2 29597161 29597193 -223659390 + MIR3 SINE MIR 165 197 -11 1320 164 4 13 chr2 29597274 29597506 -223659077 + L1M4 LINE L1 5374 5603 -581 1877 124 0 0 chr2 29597510 29597783 -223658800 + AluSg SINE Alu 29 301 -9 1998 218 107 43 chr2 29597934 29598025 -223658558 + Zaphod DNA AcHobo 2 86 -3945 2152 123 7 0 chr2 29598025 29598335 -223658248 + AluSx SINE Alu 1 312 0 1998 218 107 43 chr2 29598335 29598802 -223657781 + Zaphod DNA AcHobo 86 596 -3435 1221 152 5 0 chr2 29598815 29599012 -223657571 - AluJb SINE Alu -31 281 84 689 107 54 0 chr2 29599012 29599124 -223657459 + FLAM_C SINE Alu 14 131 -12 573 149 95 68 chr2 29599125 29599346 -223657237 + Zaphod DNA AcHobo 764 990 -3041 * 710 204 102 34 chr2 29599345 29599595 -223656988 + Zaphod DNA AcHobo 3596 3875 -156 1934 96 14 7 chr2 29599595 29599899 -223656684 + AluSq SINE Alu 1 306 0 710 204 102 34 chr2 29599899 29599970 -223656613 + Zaphod DNA AcHobo 3875 3940 -91 1732 108 81 0 chr2 29599972 29600231 -223656352 + AluSx SINE Alu 1 280 -32 2172 92 20 0 chr2 29600253 29600556 -223656027 + AluY SINE Alu 1 309 -2 483 325 13 0 chr2 29600589 29600740 -223655843 - MER91A DNA MER1_type -43 153 1 239 291 105 12 chr2 29602276 29602362 -223654221 - L2 LINE L2 -21 3251 3158 1656 150 65 0 chr2 29602587 29602880 -223653703 - AluSx SINE Alu 0 312 1 1985 108 7 43 chr2 29603567 29603872 -223652711 + AluSx SINE Alu 1 294 -18 924 215 23 41 chr2 29604765 29604880 -223651703 + MER58C DNA MER1_type 1 117 -2303 1913 153 7 0 chr2 29604880 29605206 -223651377 + AluSx SINE Alu 1 328 0 1981 129 3 3 chr2 29605209 29605533 -223651050 + AluSx SINE Alu 1 324 0 924 215 23 41 chr2 29605533 29605630 -223650953 + MER58C DNA MER1_type 119 215 0 324 120 0 0 chr2 29606460 29606510 -223650073 + (TG)n Simple_repeat Simple_repeat 1 50 0 347 155 0 14 chr2 29606945 29607016 -223649567 + CT-rich Low_complexity Low_complexity 4 73 0 868 291 70 49 chr2 29607022 29607468 -223649115 - L2 LINE L2 -14 3299 2845 1700 151 51 14 chr2 29607503 29607795 -223648788 + AluJo SINE Alu 3 305 -7 1723 164 7 0 chr2 29608055 29608341 -223648242 - AluSx SINE Alu 0 312 25 8903 178 97 50 chr2 29608532 29608990 -223647593 - Cheshire DNA MER1_type -202 2218 1783 1696 169 37 7 chr2 29608990 29609286 -223647297 + AluJb SINE Alu 1 305 -7 8903 178 97 50 chr2 29609286 29610156 -223646427 - Cheshire DNA MER1_type -637 1783 956 2434 68 3 0 chr2 29610156 29610450 -223646133 + AluY SINE Alu 1 295 -16 8903 178 97 50 chr2 29610450 29611232 -223645351 - Cheshire DNA MER1_type -1464 956 7 211 161 286 0 chr2 29611291 29611347 -223645236 + MIR SINE MIR 32 103 -105 324 311 62 62 chr2 29611484 29611905 -223644678 + L1ME LINE L1 492 991 -5539 969 266 125 17 chr2 29612145 29612592 -223643991 + L1ME LINE L1 1404 1801 -4920 1604 103 5 5 chr2 29612592 29612816 -223643767 - AluSp SINE Alu -15 298 75 969 266 125 17 chr2 29612816 29613098 -223643485 + L1ME LINE L1 1801 2280 -4441 759 228 50 8 chr2 29613101 29613341 -223643242 + L1ME LINE L1 2354 2563 -3977 1847 126 38 0 chr2 29613341 29613604 -223642979 + AluSq SINE Alu 1 273 -40 2438 86 0 9 chr2 29614193 29614508 -223642075 + AluSq SINE Alu 1 312 -1 1757 185 17 0 chr2 29614744 29615041 -223641542 - AluJo SINE Alu -7 305 4 1473 154 0 0 chr2 29615051 29615271 -223641312 - AluJb SINE Alu -7 305 86 2353 98 3 0 chr2 29615297 29615602 -223640981 - AluSc SINE Alu -3 306 1 315 317 41 8 chr2 29615603 29615726 -223640857 + MER5A DNA MER1_type 63 189 0 * 780 237 20 41 chr2 29615726 29615921 -223640662 + MIR SINE MIR 71 260 -2 2188 105 14 0 chr2 29615944 29616239 -223640344 - AluSx SINE Alu -13 299 1 307 234 26 0 chr2 29616303 29616380 -223640203 - MER110 LTR ERV1 -42 449 371 1576 176 59 7 chr2 29616510 29616782 -223639801 + AluJo SINE Alu 12 297 -15 2206 128 0 7 chr2 29617005 29617311 -223639272 + AluSx SINE Alu 1 304 -8 23 0 0 0 chr2 29617311 29617334 -223639249 + AT_rich Low_complexity Low_complexity 1 23 0 1410 131 0 0 chr2 29617752 29617943 -223638640 - AluSx SINE Alu -121 191 1 263 342 18 0 chr2 29618551 29618665 -223637918 - L1ME3 LINE L1 -2 6160 6045 1232 194 0 0 chr2 29618671 29618887 -223637696 + AluJb SINE Alu 97 312 0 629 162 28 35 chr2 29618893 29619035 -223637548 - L1ME3 LINE L1 -112 6050 5910 439 153 0 0 chr2 29619040 29619099 -223637484 - AluJo SINE Alu -22 290 232 957 180 6 34 chr2 29619103 29619281 -223637302 - AluJo SINE Alu -139 173 1 2612 220 88 37 chr2 29619283 29620082 -223636501 - L1ME3 LINE L1 -256 5906 5017 2338 100 17 0 chr2 29620082 29620383 -223636200 + AluSq SINE Alu 1 306 -7 2612 220 88 37 chr2 29620383 29620798 -223635785 - L1ME3 LINE L1 -1145 5017 4625 2271 128 0 0 chr2 29620822 29621134 -223635449 - AluSx SINE Alu 0 312 1 553 276 76 77 chr2 29621546 29621825 -223634758 + L2 LINE L2 2722 3000 -313 213 39 0 0 chr2 29621825 29621851 -223634732 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1968 122 7 0 chr2 29621853 29622132 -223634451 - AluSx SINE Alu -31 281 1 553 276 76 77 chr2 29622132 29622252 -223634331 + L2 LINE L2 3001 3139 -174 414 0 0 0 chr2 29622253 29622299 -223634284 + (CA)n Simple_repeat Simple_repeat 2 47 0 357 250 120 0 chr2 29622322 29622414 -223634169 + MER81 DNA DNA 8 110 -4 611 229 38 8 chr2 29622414 29622545 -223634038 + L2 LINE L2 3179 3313 0 3232 141 20 6 chr2 29622996 29623534 -223633049 + L1MA4 LINE L1 5747 6292 -8 5515 165 14 3 chr2 29623718 29624664 -223631919 - L1PA14 LINE L1 -1432 4714 3759 6525 79 26 21 chr2 29624664 29624754 -223631829 + L1PA14 LINE L1 4728 4816 -1345 2035 88 3 61 chr2 29624754 29625094 -223631489 + AluSg SINE Alu 1 323 0 6525 79 26 21 chr2 29625094 29626100 -223630483 + L1PA14 LINE L1 4816 5821 -340 2062 147 0 6 chr2 29626100 29626413 -223630170 + AluSx SINE Alu 1 311 -1 6525 79 26 21 chr2 29626413 29626747 -223629836 + L1PA14 LINE L1 5821 6152 -9 261 277 133 43 chr2 29627058 29627246 -223629337 + MIR SINE MIR 31 235 -27 200 371 72 21 chr2 29627712 29627762 -223628821 + MIR SINE MIR 44 90 -118 1645 187 7 7 chr2 29627762 29628061 -223628522 - AluJo SINE Alu -13 299 1 200 371 72 21 chr2 29628061 29628107 -223628476 + MIR SINE MIR 90 145 -63 346 317 50 8 chr2 29628724 29628844 -223627739 - MIR3 SINE MIR -3 205 81 26 30 0 0 chr2 29629121 29629154 -223627429 + AT_rich Low_complexity Low_complexity 1 33 0 1855 136 42 3 chr2 29629384 29629671 -223626912 + AluJo SINE Alu 1 298 -14 26 0 0 0 chr2 29630939 29630965 -223625618 + AT_rich Low_complexity Low_complexity 1 26 0 243 238 143 0 chr2 29631157 29631241 -223625342 + L1ME4a LINE L1 6009 6104 -17 248 306 31 0 chr2 29631272 29631370 -223625213 + MER46C DNA MER2_type 194 294 -44 787 228 114 17 chr2 29632507 29632744 -223623839 + MIR SINE MIR 3 262 0 2315 67 3 19 chr2 29635691 29636003 -223620580 - AluSg1 SINE Alu -1 308 2 28 95 0 0 chr2 29636003 29636087 -223620496 + AT_rich Low_complexity Low_complexity 1 84 0 203 191 0 24 chr2 29636412 29636454 -223620129 - L2 LINE L2 -81 3191 3151 1874 114 40 10 chr2 29637009 29637306 -223619277 - AluSq SINE Alu -7 306 1 364 261 98 25 chr2 29637916 29638119 -223618464 - L1ME4a LINE L1 -81 6040 5823 1497 168 0 15 chr2 29638492 29638754 -223617829 - AluJo SINE Alu -54 258 1 2959 136 67 40 chr2 29638847 29639428 -223617155 - L1MB8 LINE L1 -9 6169 5573 1055 147 80 59 chr2 29639993 29640231 -223616352 - AluJo SINE Alu 0 312 70 754 220 56 60 chr2 29641011 29641200 -223615383 + Tigger3b DNA MER2_type 17 206 -1025 674 291 17 30 chr2 29641200 29641502 -223615081 + AluSx SINE Alu 1 298 -4 754 220 56 60 chr2 29641502 29641544 -223615039 + Tigger3b DNA MER2_type 206 247 -984 1946 112 0 0 chr2 29641710 29641970 -223614613 - AluSq SINE Alu -53 260 1 1706 163 7 17 chr2 29642353 29642653 -223613930 - AluJb SINE Alu -15 297 1 1195 179 153 48 chr2 29642653 29642921 -223613662 - AluJo SINE Alu -6 296 1 2324 93 10 0 chr2 29643494 29643804 -223612779 - AluSp SINE Alu 0 313 1 309 195 155 63 chr2 29644374 29644548 -223612035 + L1M4 LINE L1 5194 5383 -763 209 222 0 74 chr2 29644831 29644885 -223611698 + L2 LINE L2 3209 3258 -14 2143 141 0 3 chr2 29644885 29645198 -223611385 - AluSp SINE Alu -1 312 1 1658 229 113 22 chr2 29645501 29645960 -223610623 - MLT1F1 LTR MaLR 0 567 67 330 313 21 10 chr2 29647065 29647161 -223609422 - L2 LINE L2 -24 3289 3193 2298 102 0 6 chr2 29647310 29647625 -223608958 - AluSp SINE Alu 0 313 1 1335 161 68 14 chr2 29648448 29648740 -223607843 - L1MA8 LINE L1 -2 6289 5982 22 35 0 0 chr2 29649223 29649252 -223607331 + AT_rich Low_complexity Low_complexity 1 29 0 2324 92 0 3 chr2 29650709 29651004 -223605579 + AluSg SINE Alu 1 294 -16 571 165 41 21 chr2 29651687 29651784 -223604799 - FLAM_A SINE Alu -32 110 12 777 153 0 36 chr2 29651868 29652005 -223604578 + AluJo/FLAM SINE Alu 1 132 -170 285 229 0 16 chr2 29652005 29652066 -223604517 + AluSg/x SINE Alu 134 193 -109 * 1348 219 59 0 chr2 29652044 29652314 -223604269 + MLT1A1 LTR MaLR 55 340 -25 2298 128 53 14 chr2 29652458 29652895 -223603688 + Tigger3b DNA MER2_type 325 778 -453 1290 161 141 16 chr2 29652889 29653144 -223603439 + Tigger3b DNA MER2_type 945 1231 0 * 1893 113 46 14 chr2 29653438 29653722 -223602861 - AluSg SINE Alu -17 293 1 4644 191 66 34 chr2 29654385 29654534 -223602049 - Charlie1a DNA MER1_type -1306 1455 1312 2035 127 7 10 chr2 29654534 29654833 -223601750 + AluSx SINE Alu 1 298 -14 4644 191 66 34 chr2 29654833 29655994 -223600589 - Charlie1a DNA MER1_type -1449 1312 104 2148 100 10 3 chr2 29656243 29656533 -223600050 - AluSg SINE Alu -18 292 1 260 287 11 11 chr2 29656631 29656711 -223599872 + GA-rich Low_complexity Low_complexity 2 84 -4 2278 108 0 0 chr2 29656711 29657007 -223599576 + AluY SINE Alu 1 296 -15 1488 155 36 8 chr2 29657211 29657463 -223599120 + AluSx SINE Alu 36 294 -18 1033 269 104 40 chr2 29657621 29658164 -223598419 - L1M4 LINE L1 -968 5247 4646 2277 95 10 0 chr2 29658164 29658460 -223598123 + AluSq SINE Alu 1 299 -14 1033 269 104 40 chr2 29658460 29658625 -223597958 - L1M4 LINE L1 -1569 4646 4493 1174 259 63 67 chr2 29658646 29659243 -223597340 - L1MEc LINE L1 -3372 2843 2273 2204 105 21 0 chr2 29659243 29659529 -223597054 - AluSx SINE Alu -20 292 1 1174 259 63 67 chr2 29659529 29659717 -223596866 - L1MEc LINE L1 -3942 2273 2086 1819 59 40 0 chr2 29659979 29660201 -223596382 + AluY SINE Alu 73 303 -8 2444 59 0 0 chr2 29660579 29660867 -223595716 + AluY SINE Alu 1 288 -23 340 271 54 36 chr2 29661588 29661754 -223594829 + MER104 DNA Tc2 6 174 -6 956 261 193 27 chr2 29662401 29662714 -223593869 - L1ME3A LINE L1 -14 6156 5896 1326 149 40 4 chr2 29662714 29662942 -223593641 + MER46A DNA MER2_type 1 236 0 956 261 193 27 chr2 29662942 29663286 -223593297 - L1ME3A LINE L1 -274 5896 5390 1934 125 57 0 chr2 29663287 29663567 -223593016 - AluSx SINE Alu -16 296 1 646 227 50 12 chr2 29663567 29663808 -223592775 - L1MEc LINE L1 -3977 2268 2029 228 209 30 15 chr2 29663811 29663878 -223592705 - L1MEc LINE L1 -4441 1955 1888 1999 151 0 22 chr2 29664314 29664625 -223591958 - AluJo SINE Alu -8 304 1 285 292 97 19 chr2 29664708 29664862 -223591721 - MIR SINE MIR -83 179 14 181 356 22 22 chr2 29765508 29765598 -223490985 - L2 LINE L2 -1036 2278 2189 206 318 55 9 chr2 29765910 29766020 -223490563 + L2 LINE L2 1595 1709 -1605 219 309 82 45 chr2 29766058 29766278 -223490305 + L2 LINE L2 1698 1925 -1389 2018 135 0 3 chr2 29766459 29766762 -223489821 - AluSx SINE Alu -10 302 1 1717 116 43 53 chr2 29766815 29767116 -223489467 - AluJb SINE Alu -14 298 1 672 117 97 0 chr2 29767116 29767219 -223489364 - AluSq/x SINE Alu -177 135 23 328 295 0 0 chr2 29767222 29767300 -223489283 - MIR SINE MIR -114 148 71 207 329 41 0 chr2 29768199 29768272 -223488311 - MIR3 SINE MIR 0 208 133 479 30 0 15 chr2 29768384 29768450 -223488133 + (TG)n Simple_repeat Simple_repeat 1 65 0 461 242 139 33 chr2 29768481 29768696 -223487887 - MIR SINE MIR -4 258 21 2210 112 0 28 chr2 29770187 29770508 -223486075 + AluSx SINE Alu 1 312 0 210 316 53 11 chr2 29770524 29770619 -223485964 + MER5A DNA MER1_type 86 184 -5 186 39 0 118 chr2 29771091 29771142 -223485441 + (GGCTG)n Simple_repeat Simple_repeat 5 49 0 191 139 83 0 chr2 29772733 29772769 -223483814 + MIR SINE MIR 115 153 -55 421 224 122 0 chr2 29773096 29773203 -223483380 - MIR SINE MIR -56 152 33 4126 116 24 41 chr2 29773511 29773948 -223482635 - L1MA4 LINE L1 0 6300 5878 1839 100 90 10 chr2 29773948 29774238 -223482345 + AluSq SINE Alu 1 313 0 4126 116 24 41 chr2 29774238 29774480 -223482103 - L1MA4 LINE L1 -422 5878 5633 1015 171 104 0 chr2 29774480 29774720 -223481863 + L1 LINE L1 5101 5365 -781 251 273 157 36 chr2 29777050 29777299 -223479284 + L2 LINE L2 2600 2878 -436 396 270 169 49 chr2 29777402 29777669 -223478914 + L2 LINE L2 3014 3312 -1 537 308 66 0 chr2 29777728 29777926 -223478657 + MIR SINE MIR 52 262 0 1044 142 41 0 chr2 29778737 29778906 -223477677 - AluSg/x SINE Alu -3 307 132 2066 89 27 7 chr2 29778906 29779198 -223477385 - AluSx SINE Alu -14 298 1 264 298 48 0 chr2 29779549 29779633 -223476950 - MIR3 SINE MIR -40 168 81 686 237 54 0 chr2 29780492 29780678 -223475905 + MIR3 SINE MIR 6 201 -7 472 100 0 0 chr2 29781413 29781473 -223475110 - Alu SINE Alu -26 285 226 961 275 58 3 chr2 29781621 29781930 -223474653 + HsTC2 DNA Tc2 215 540 -1358 255 210 0 62 chr2 29781936 29782017 -223474566 + HsTC2 DNA Tc2 1822 1897 -1 433 345 125 12 chr2 29782041 29782550 -223474033 + L2 LINE L2 2487 3058 -214 621 245 173 3 chr2 29782626 29782949 -223473634 + L1ME4a LINE L1 5741 6118 -3 364 327 133 20 chr2 29784423 29784671 -223471912 + L2 LINE L2 2997 3272 0 244 296 157 26 chr2 29784860 29784975 -223471608 + L3 LINE CR1 1435 1564 -13 2070 133 0 3 chr2 29784990 29785292 -223471291 + AluSg SINE Alu 1 301 -9 519 276 65 61 chr2 29786226 29786472 -223470111 + MIR SINE MIR 10 256 -6 197 258 32 0 chr2 29787085 29787147 -223469436 - MIR3 SINE MIR -24 184 121 1554 133 115 18 chr2 29788587 29788865 -223467718 - AluSg SINE Alu -5 305 1 218 271 71 0 chr2 29789000 29789070 -223467513 + L3b LINE CR1 1285 1359 -224 288 212 68 68 chr2 29790446 29790578 -223466005 - L1ME4a LINE L1 -44 6077 5946 2238 149 48 86 chr2 29790584 29791059 -223465524 + LTR32 LTR ERVL 15 471 0 2242 94 3 0 chr2 29791146 29791444 -223465139 - AluSx SINE Alu -13 299 1 391 302 71 0 chr2 29792016 29792142 -223464441 - MIR SINE MIR 0 262 128 1118 175 0 0 chr2 29792245 29792416 -223464167 + FAM SINE Alu 2 172 -3 399 277 0 10 chr2 29792453 29792554 -223464029 - HsTC2 DNA Tc2 -1798 100 1 1824 169 0 7 chr2 29793279 29793586 -223462997 - AluJb SINE Alu -7 305 1 4543 104 38 26 chr2 29793619 29793807 -223462776 - L1PB1 LINE L1 -1 6150 5966 2458 54 0 0 chr2 29793807 29794103 -223462480 - AluY SINE Alu -15 296 1 4543 104 38 26 chr2 29794103 29794279 -223462304 - L1PB1 LINE L1 -185 5966 5794 324 0 0 0 chr2 29794279 29794315 -223462268 + (TG)n Simple_repeat Simple_repeat 2 37 0 186 43 0 0 chr2 29794315 29794338 -223462245 + (CATA)n Simple_repeat Simple_repeat 2 24 0 4543 104 38 26 chr2 29794338 29794665 -223461918 - L1PB1 LINE L1 -356 5795 5449 336 303 158 30 chr2 29794667 29794964 -223461619 + L2 LINE L2 2376 2710 -604 257 300 20 47 chr2 29794965 29795115 -223461468 + L1MC/D LINE L1 5370 5515 -2270 349 264 106 65 chr2 29795488 29795864 -223460719 + L2 LINE L2 2696 3079 -234 1184 154 41 9 chr2 29795877 29796097 -223460486 - AluJo SINE Alu -85 227 1 337 269 54 15 chr2 29796100 29796230 -223460353 + L2 LINE L2 3117 3251 -62 291 272 11 22 chr2 29797228 29797320 -223459263 + L2 LINE L2 3176 3266 -47 219 271 29 14 chr2 29797670 29797740 -223458843 + L2 LINE L2 3197 3267 -5 181 175 25 0 chr2 29797984 29798024 -223458559 - MER5A DNA MER1_type -114 75 35 307 219 85 0 chr2 29798087 29798169 -223458414 - MIR SINE MIR -66 196 108 650 188 8 16 chr2 29798250 29798378 -223458205 - MIR SINE MIR -37 225 99 236 245 0 53 chr2 29799088 29799182 -223457401 + CT-rich Low_complexity Low_complexity 2 90 0 234 293 13 0 chr2 29801054 29801129 -223455454 + (CA)n Simple_repeat Simple_repeat 1 76 0 329 321 43 33 chr2 29802054 29802238 -223454345 - MIR3 SINE MIR -6 202 17 2235 115 0 0 chr2 29802366 29802678 -223453905 + AluSx SINE Alu 1 312 0 2078 175 142 16 chr2 29803189 29803675 -223452908 + LTR10B LTR ERV1 1 547 0 195 261 62 0 chr2 29804045 29804110 -223452473 + MIR SINE MIR 83 151 -57 2133 106 41 3 chr2 29804110 29804403 -223452180 + AluSx SINE Alu 1 304 -8 530 263 94 19 chr2 29804458 29804724 -223451859 + MER113 DNA MER1_type? 30 315 -206 659 104 85 9 chr2 29804725 29804831 -223451752 + MSTA LTR MaLR 264 377 -51 367 227 85 14 chr2 29804788 29804929 -223451654 + MER113 DNA MER1_type? 261 411 -110 * 1623 185 0 52 chr2 29805870 29806199 -223450384 + AluJo SINE Alu 1 312 0 720 275 148 27 chr2 29806463 29807000 -223449583 - L2 LINE L2 0 3313 2709 367 208 40 64 chr2 29807037 29807162 -223449421 - L1MD3 LINE L1 -10 7985 7864 1925 279 73 18 chr2 29807162 29808011 -223448572 - L2 LINE L2 -599 2715 1820 220 323 0 0 chr2 29808039 29808101 -223448482 - L2 LINE L2 -1606 1708 1647 506 294 26 0 chr2 29808113 29808307 -223448276 - L2 LINE L2 -2363 951 753 200 213 80 40 chr2 29809613 29809688 -223446895 - MIR3 SINE MIR -17 191 114 2126 168 40 89 chr2 29809688 29810271 -223446312 + MLT2B3 LTR ERVL 1 554 0 216 293 85 0 chr2 29811938 29812020 -223444563 + MIR3 SINE MIR 117 205 -3 552 238 24 8 chr2 29812753 29812879 -223443704 - L2 LINE L2 0 3313 3186 252 0 0 0 chr2 29813525 29813553 -223443030 + (CA)n Simple_repeat Simple_repeat 2 29 0 207 286 0 0 chr2 29814532 29814581 -223442002 + L2 LINE L2 3264 3312 -1 2134 132 0 0 chr2 29814825 29815114 -223441469 + AluSx SINE Alu 1 289 -23 2200 145 0 0 chr2 29815131 29815486 -223441097 + AluSx SINE Alu 1 355 0 770 193 12 0 chr2 29817072 29817400 -223439183 + (CA)n Simple_repeat Simple_repeat 1 332 0 486 173 13 36 chr2 29817446 29817696 -223438887 + (CA)n Simple_repeat Simple_repeat 1 244 0 439 247 6 6 chr2 29817717 29817887 -223438696 + (CA)n Simple_repeat Simple_repeat 2 171 0 439 195 16 43 chr2 29817929 29818114 -223438469 + (CA)n Simple_repeat Simple_repeat 1 180 0 200 250 12 0 chr2 29818132 29818212 -223438371 + (CA)n Simple_repeat Simple_repeat 1 81 0 762 216 11 1 chr2 29818230 29819024 -223437559 + (CA)n Simple_repeat Simple_repeat 1 801 0 916 94 8 8 chr2 29819301 29819428 -223437155 + AluSq/x SINE Alu 1 127 -186 296 235 59 0 chr2 29819539 29819607 -223436976 - MIR SINE MIR -190 72 1 2144 152 192 23 chr2 29819940 29820460 -223436123 - LTR18B LTR ERVL -6 608 1 322 183 215 0 chr2 29821935 29822028 -223434555 + MER81 DNA DNA 1 113 -1 300 164 78 0 chr2 29822360 29822488 -223434095 + (TCTA)n Simple_repeat Simple_repeat 1 138 0 1155 151 78 0 chr2 29823115 29823334 -223433249 + MER46A DNA MER2_type 1 236 0 309 269 37 11 chr2 29823358 29823467 -223433116 - MER91 DNA MER1_type 0 190 86 238 284 154 24 chr2 29824081 29824250 -223432333 - MIR SINE MIR -70 192 2 2074 109 75 31 chr2 29825449 29825798 -223430785 - THE1B LTR MaLR 0 364 1 2244 157 70 11 chr2 29825812 29826133 -223430450 - L1MB3 LINE L1 -7 6176 5817 1979 163 0 13 chr2 29826133 29826309 -223430274 - AluSx SINE Alu -3 309 137 2236 91 0 53 chr2 29826309 29826628 -223429955 - AluSg SINE Alu -8 302 1 1979 163 0 13 chr2 29826628 29826764 -223429819 - AluSx SINE Alu -175 137 1 2244 157 70 11 chr2 29826764 29826914 -223429669 - L1MB3 LINE L1 -366 5817 5677 1852 156 7 20 chr2 29827545 29827847 -223428736 + AluJb SINE Alu 11 308 -4 327 288 110 18 chr2 29828715 29828878 -223427705 - MIR SINE MIR -49 213 36 636 258 138 5 chr2 29828904 29829121 -223427462 + ORSL DNA AcHobo 9 254 -21 3237 129 46 55 chr2 29831818 29832317 -223424266 - LTR36 LTR ERV1 0 611 109 198 118 0 0 chr2 29832317 29832351 -223424232 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 3607 21 5 0 chr2 29832351 29832785 -223423798 - L1PA5 LINE L1 -16 6138 5703 3237 129 46 55 chr2 29832785 29832898 -223423685 - LTR36 LTR ERV1 -500 111 4 4953 77 3 1 chr2 29833012 29833671 -223422912 + PABL_A LTR ERV1 1 660 0 549 277 6 40 chr2 29833730 29833907 -223422676 - MER5B DNA MER1_type -5 173 3 229 348 44 33 chr2 29834018 29834199 -223422384 + MIR SINE MIR 41 223 -39 200 304 63 0 chr2 29834581 29834660 -223421923 - MIR SINE MIR -79 183 100 436 206 199 22 chr2 29834673 29834809 -223421774 - MER5A DNA MER1_type -21 168 9 925 162 56 15 chr2 29835104 29835302 -223421281 - MER89 LTR ERV1 0 559 354 278 254 15 15 chr2 29835331 29835398 -223421185 + MER5A DNA MER1_type 39 105 -84 212 323 172 0 chr2 29835577 29835670 -223420913 + MER5A DNA MER1_type 55 163 -26 504 0 0 0 chr2 29836359 29836415 -223420168 + (TG)n Simple_repeat Simple_repeat 1 56 0 1804 141 3 58 chr2 29836560 29836873 -223419710 + AluJo SINE Alu 1 296 -16 245 317 154 0 chr2 29837697 29837801 -223418782 - MIR SINE MIR -109 153 34 208 227 23 0 chr2 29837866 29837910 -223418673 + CT-rich Low_complexity Low_complexity 1 45 0 291 305 40 68 chr2 29841819 29841996 -223414587 + MIR SINE MIR 20 191 -71 311 284 125 82 chr2 29843244 29843339 -223413244 + MIR SINE MIR 34 123 -139 2401 97 0 3 chr2 29843339 29843647 -223412936 + AluSq SINE Alu 1 307 -6 311 284 125 82 chr2 29843647 29843759 -223412824 + MIR SINE MIR 123 250 -12 2139 137 0 10 chr2 29845020 29845320 -223411263 - AluSx SINE Alu -15 297 1 724 224 14 0 chr2 29846391 29846534 -223410049 + Charlie1 DNA MER1_type 2 146 -2615 763 256 0 9 chr2 29846656 29846871 -223409712 + AluY SINE Alu 99 311 0 339 279 85 4 chr2 29847585 29847727 -223408856 + MIR SINE MIR 16 165 -63 571 271 135 14 chr2 29847948 29848155 -223408428 - MIR SINE MIR 0 262 31 1380 192 133 3 chr2 29848276 29848599 -223407984 - MLT1A1 LTR MaLR 0 365 1 2028 125 13 35 chr2 29849705 29850016 -223406567 + AluJb SINE Alu 1 304 -8 274 236 19 123 chr2 29850222 29850285 -223406298 + MER81 DNA DNA 20 69 -45 2079 112 32 35 chr2 29850285 29850599 -223405984 + AluSq SINE Alu 1 313 0 274 236 19 123 chr2 29850599 29850641 -223405942 + MER81 DNA DNA 69 114 0 427 339 22 6 chr2 29850667 29850850 -223405733 + MIR SINE MIR 76 261 -1 376 208 182 0 chr2 29850980 29851139 -223405444 - MER53 DNA DNA -1 188 1 2303 95 27 0 chr2 29851376 29851670 -223404913 + AluSx SINE Alu 3 304 -8 2026 165 51 43 chr2 29852585 29852966 -223403617 + MLT2A2 LTR ERVL 1 395 -159 2135 108 22 38 chr2 29852966 29853281 -223403302 - AluSx SINE Alu 0 312 3 2026 165 51 43 chr2 29853281 29853443 -223403140 + MLT2A2 LTR ERVL 395 554 0 180 227 0 0 chr2 29853524 29853568 -223403015 + L2 LINE L2 2919 2962 -310 188 372 51 26 chr2 29853704 29853782 -223402801 + L2 LINE L2 3138 3217 -55 511 156 227 0 chr2 29853810 29853938 -223402645 + L1MC2 LINE L1 6186 6342 -2 1001 112 0 14 chr2 29854062 29854205 -223402378 + AluJb SINE Alu 1 141 -171 27 62 0 0 chr2 29854221 29854269 -223402314 + AT_rich Low_complexity Low_complexity 1 48 0 4610 182 51 8 chr2 29854269 29856076 -223400507 + L1MC2 LINE L1 4318 6194 -150 201 74 0 0 chr2 29857547 29857574 -223399009 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 1847 85 0 4 chr2 29857603 29857838 -223398745 - AluSg/x SINE Alu -9 301 68 460 285 98 8 chr2 29858531 29858766 -223397817 - LTR33 LTR ERVL -58 463 208 3640 165 27 27 chr2 29858789 29859321 -223397262 + MER50 LTR ERV1 1 532 -202 17869 27 4 0 chr2 29859321 29862231 -223394352 - L1PA3 LINE L1 0 6155 3238 3640 165 27 27 chr2 29862231 29862260 -223394323 + MER50 LTR ERV1 532 560 -174 1904 115 50 0 chr2 29862260 29862538 -223394045 - AluY SINE Alu -19 292 1 3640 165 27 27 chr2 29862538 29862709 -223393874 + MER50 LTR ERV1 559 734 0 2105 120 0 3 chr2 29863739 29864022 -223392561 + AluSx SINE Alu 1 282 -30 273 119 0 0 chr2 29864022 29864064 -223392519 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 814 149 43 7 chr2 29864064 29864205 -223392378 + MLT1B LTR MaLR 245 390 0 1967 135 11 0 chr2 29864371 29864653 -223391930 - AluSx SINE Alu -27 285 1 243 143 24 0 chr2 29864655 29864697 -223391886 - L2 LINE L2 -1102 2212 2170 416 256 110 26 chr2 29864752 29864943 -223391640 - L1M4 LINE L1 -519 6361 6155 687 245 66 25 chr2 29864946 29865142 -223391441 - MER63A DNA MER1_type 0 210 7 593 289 81 49 chr2 29865177 29866323 -223390260 - L1M4 LINE L1 -747 6101 4933 348 328 82 15 chr2 29866708 29866842 -223389741 + MIR SINE MIR 7 149 -113 657 303 219 21 chr2 29867760 29868271 -223388312 + L3 LINE CR1 913 1524 -53 193 259 103 0 chr2 29868358 29868416 -223388167 - L2 LINE L2 -13 3259 3196 423 276 118 96 chr2 29868823 29869675 -223386908 - L1M4 LINE L1 -5655 1194 485 522 204 29 102 chr2 29870835 29870997 -223385586 + MER3 DNA MER1_type 1 146 -63 1904 123 43 17 chr2 29870997 29871298 -223385285 - AluSq SINE Alu -4 309 1 522 204 29 102 chr2 29871298 29871341 -223385242 + MER3 DNA MER1_type 146 191 -18 301 341 166 33 chr2 29871374 29871585 -223384998 + L2 LINE L2 3034 3272 0 2167 109 0 7 chr2 29872184 29872486 -223384097 - AluSq SINE Alu -12 301 2 23 0 0 0 chr2 29872492 29872515 -223384068 + AT_rich Low_complexity Low_complexity 1 23 0 296 369 48 60 chr2 29873429 29873697 -223382886 + L2 LINE L2 2996 3260 -12 1491 104 10 0 chr2 29876313 29876515 -223380068 + AluSg/x SINE Alu 103 306 -6 701 368 105 3 chr2 29876581 29876972 -223379611 - L3 LINE CR1 -67 1510 1080 588 267 191 36 chr2 29876972 29877434 -223379149 - L2 LINE L2 -3 3310 2778 1210 241 48 16 chr2 29877630 29878008 -223378575 - L1MEc LINE L1 -4481 1915 1526 2116 211 122 12 chr2 29878039 29878816 -223377767 - L1MEc LINE L1 -4924 1472 610 227 114 0 0 chr2 29878874 29878909 -223377674 + Charlie3 DNA MER1_type 2678 2712 0 396 254 210 31 chr2 29878910 29879134 -223377449 - L1MEc LINE L1 -5806 590 327 228 234 56 56 chr2 29879142 29879249 -223377334 + MSR1 Satellite Satellite 4 110 -1 657 280 28 40 chr2 29879250 29879500 -223377083 - L1MEc LINE L1 -6110 286 40 2209 102 0 32 chr2 29879557 29879872 -223376711 + AluSx SINE Alu 1 305 -7 939 273 32 0 chr2 29879979 29880232 -223376351 + MIR SINE MIR 2 262 0 649 224 45 91 chr2 29880246 29880598 -223375985 - LOR1-int LTR ERV1 -258 4678 4343 295 145 211 13 chr2 29880604 29880680 -223375903 - LTR37A LTR ERV1 -332 94 4 565 146 48 0 chr2 29880687 29880790 -223375793 - LOR1-int LTR ERV1 -691 4245 4138 3500 181 86 97 chr2 29880839 29882256 -223374327 - LOR1-int LTR ERV1 -1066 3870 2469 309 282 87 0 chr2 29882243 29882346 -223374237 - LOR1-int LTR ERV1 -3936 4184 4073 * 774 215 51 69 chr2 29882861 29882909 -223373674 - LOR1-int LTR ERV1 -3211 3120 3073 437 211 62 118 chr2 29882909 29883231 -223373352 - LTR57-int LTR ERVL -4246 1097 794 774 215 51 69 chr2 29883231 29883287 -223373296 - LOR1-int LTR ERV1 -3258 3073 1236 367 227 0 11 chr2 29883972 29884060 -223372523 - MER95 LTR ERV -76 355 269 555 248 154 16 chr2 29884569 29884770 -223371813 + MIR SINE MIR 4 231 -31 21 89 0 0 chr2 29884847 29884903 -223371680 + AT_rich Low_complexity Low_complexity 1 56 0 391 231 126 7 chr2 29886412 29886555 -223370028 - MER5C DNA MER1_type -2 322 163 1655 215 7 0 chr2 29886570 29886872 -223369711 + AluJo SINE Alu 1 304 -8 332 225 102 75 chr2 29887012 29887199 -223369384 - L1ME LINE L1 -302 5819 5628 23 0 0 0 chr2 29887836 29887859 -223368724 + AT_rich Low_complexity Low_complexity 1 23 0 1053 198 35 0 chr2 29888635 29888837 -223367746 - MER58A DNA MER1_type -15 209 1 221 304 99 89 chr2 29890133 29890426 -223366157 - L2 LINE L2 -52 3220 2925 8937 174 41 16 chr2 29890688 29893713 -223362870 - L1PA16 LINE L1 -7 6862 3770 28 0 0 0 chr2 29893713 29893741 -223362842 + AT_rich Low_complexity Low_complexity 1 28 0 6622 35 1 0 chr2 29893741 29894568 -223362015 - L1PA3 LINE L1 0 6155 5328 3002 242 40 13 chr2 29894539 29895640 -223360943 - L1PA16 LINE L1 -3037 3812 2684 * 912 219 0 0 chr2 29895661 29895862 -223360721 - L1PA16 LINE L1 -3996 2853 2653 874 251 46 80 chr2 29896860 29897271 -223359312 + L2 LINE L2 2917 3313 0 1169 62 0 38 chr2 29898198 29898358 -223358225 - L1PA7 LINE L1 0 6154 6001 1104 153 18 0 chr2 29898466 29898636 -223357947 - FRAM SINE Alu -8 168 1 234 286 12 0 chr2 29898639 29898723 -223357860 - L1M4 LINE L1 -3705 2441 2357 335 299 104 10 chr2 29899142 29899343 -223357240 - L2 LINE L2 -1579 1735 1516 2177 111 0 0 chr2 29899351 29899648 -223356935 - AluSx SINE Alu -15 297 1 651 286 104 14 chr2 29900344 29900564 -223356019 + MIR SINE MIR 11 250 -12 385 219 80 60 chr2 29900807 29900958 -223355625 - L1MC/D LINE L1 -2333 5475 5322 1227 141 70 0 chr2 29901241 29901482 -223355101 - L1MA5 LINE L1 -3 6297 6040 551 267 23 47 chr2 29902159 29902417 -223354166 - HAL1 LINE L1 -12 2495 2244 575 246 35 10 chr2 29902480 29902683 -223353900 - HAL1 LINE L1 -768 1739 1532 777 274 14 18 chr2 29902688 29902907 -223353676 - MER58A DNA MER1_type -1 223 6 273 276 60 37 chr2 29903064 29903198 -223353385 - HAL1 LINE L1 -2369 138 2 1502 113 17 13 chr2 29903507 29903738 -223352845 + L1PA13 LINE L1 5928 6159 -4 921 197 94 0 chr2 29903748 29903951 -223352632 + Charlie1 DNA MER1_type 2536 2757 -4 191 167 189 87 chr2 29903994 29904104 -223352479 + MIR3 SINE MIR 35 157 -51 1248 91 26 108 chr2 29904133 29904365 -223352218 - L1PA7 LINE L1 -2 6152 5940 394 294 81 6 chr2 29909431 29909591 -223346992 + MIR SINE MIR 41 212 -50 1652 171 16 26 chr2 29909625 29909935 -223346648 + AluJb SINE Alu 1 307 -5 323 178 22 67 chr2 29910206 29910296 -223346287 - L1ME LINE L1 -346 5775 5690 2009 228 76 18 chr2 29911019 29911586 -223344997 + L1ME2 LINE L1 5541 6140 -24 192 40 0 0 chr2 29911599 29911624 -223344959 + (CA)n Simple_repeat Simple_repeat 2 26 0 2026 184 180 24 chr2 29911711 29912162 -223344421 - MLT1F1 LTR MaLR -2 565 45 603 274 137 44 chr2 29913131 29913474 -223343109 - MLT1J1 LTR MaLR -10 436 62 6798 189 164 26 chr2 29913880 29915422 -223341161 - MER52A LTR ERV1 0 1755 1 1001 243 46 57 chr2 29916382 29916461 -223340122 - L1ME1 LINE L1 -6 6160 6082 1864 131 96 10 chr2 29916461 29916775 -223339808 - MER61A LTR ERV1 -2 341 1 1001 243 46 57 chr2 29916775 29916938 -223339645 - L1ME1 LINE L1 -84 6082 5921 1626 196 32 0 chr2 29916938 29917219 -223339364 - AluJo SINE Alu -18 294 5 1001 243 46 57 chr2 29917219 29917346 -223339237 - L1ME1 LINE L1 -245 5921 5794 2039 137 0 3 chr2 29917359 29917651 -223338932 - AluSx SINE Alu -15 297 7 2420 70 3 0 chr2 29918051 29918349 -223338234 + AluY SINE Alu 1 299 -12 2611 157 45 21 chr2 29918536 29919019 -223337564 + L1MB5 LINE L1 5672 6166 -8 768 225 98 46 chr2 29919146 29919627 -223336956 - L1ME4a LINE L1 -9 7776 5557 302 60 100 0 chr2 29919627 29919677 -223336906 - MLT2A1 LTR ERVL 0 444 390 514 64 90 14 chr2 29919682 29920114 -223336469 + (TA)n Simple_repeat Simple_repeat 1 464 0 2230 93 3 0 chr2 29920114 29920405 -223336178 - MLT2A1 LTR ERVL -152 292 1 393 83 0 83 chr2 29920405 29920477 -223336106 - L1MC3 LINE L1 -200 7585 7520 30 27 0 0 chr2 29920520 29920557 -223336026 + AT_rich Low_complexity Low_complexity 1 37 0 229 162 40 54 chr2 29920558 29920609 -223335974 - L1MC4 LINE L1 -1339 6703 6652 2004 146 0 0 chr2 29920609 29920896 -223335687 - AluJb SINE Alu -23 289 3 229 162 40 54 chr2 29920896 29920918 -223335665 - L1MC4 LINE L1 -1390 6652 6631 * 1092 146 75 5 chr2 29920898 29921110 -223335473 - L1MC3 LINE L1 -252 7533 7307 2022 116 44 47 chr2 29921210 29921308 -223335275 - L1MA9 LINE L1 -257 6055 5958 2186 120 0 17 chr2 29921308 29921608 -223334975 - AluSx SINE Alu -17 295 1 2022 116 44 47 chr2 29921608 29921870 -223334713 - L1MA9 LINE L1 -354 5958 5696 673 154 146 0 chr2 29921880 29922003 -223334580 - FLAM_C SINE Alu -1 142 2 2827 158 27 14 chr2 29922005 29922822 -223333761 - L1MA9 LINE L1 -617 5674 4847 * 3402 128 23 7 chr2 29922815 29923372 -223333211 + L1MA9 LINE L1 4268 4833 -1313 1709 178 0 0 chr2 29923595 29923865 -223332718 + AluJb SINE Alu 24 293 -19 260 326 32 11 chr2 29924122 29924217 -223332366 - MER5B DNA MER1_type -6 172 76 2058 139 7 0 chr2 29924239 29924541 -223332042 - AluSx SINE Alu -8 304 1 1712 105 13 0 chr2 29924692 29924931 -223331652 + L1MA5A LINE L1 6041 6282 -15 21 0 0 0 chr2 29924931 29924952 -223331631 + AT_rich Low_complexity Low_complexity 1 21 0 1216 232 79 64 chr2 29925183 29925720 -223330863 + L1MC5 LINE L1 7316 7865 -96 3441 152 41 11 chr2 29925720 29926254 -223330329 + MER44D DNA MER2_type 1 605 0 1216 232 79 64 chr2 29926254 29926323 -223330260 + L1MC5 LINE L1 7865 7931 -30 501 250 0 9 chr2 29926325 29926437 -223330146 + L2 LINE L2 3200 3310 -3 1092 174 0 0 chr2 29926468 29926635 -223329948 + FAM SINE Alu 1 167 -8 2352 96 0 10 chr2 29926645 29926959 -223329624 + AluY SINE Alu 1 311 0 1868 98 113 0 chr2 29927970 29928244 -223328339 - AluSx SINE Alu -7 305 1 235 250 36 45 chr2 29928363 29928475 -223328108 - L1ME LINE L1 -392 5729 5619 24 32 0 0 chr2 29928562 29928593 -223327990 + AT_rich Low_complexity Low_complexity 1 31 0 238 277 72 0 chr2 29928620 29928703 -223327880 - L1M2 LINE L1 -714 5577 5489 211 237 0 0 chr2 29929828 29929866 -223326717 + L2 LINE L2 3149 3186 -86 671 310 35 31 chr2 29931071 29931523 -223325060 - L1ME LINE L1 -1321 4825 4372 455 303 22 80 chr2 29932128 29932442 -223324141 + L1MDb LINE L1 775 1070 -5339 1061 159 6 0 chr2 29932474 29932637 -223323946 + FRAM SINE Alu 1 162 -14 355 109 47 0 chr2 29932650 29932714 -223323869 + L1MDb LINE L1 1112 1178 -5231 751 207 22 56 chr2 29932727 29932906 -223323677 + L1MD2 LINE L1 6136 6308 -51 192 294 99 59 chr2 29933033 29933305 -223323278 + L2 LINE L2 2599 2881 -433 686 290 123 25 chr2 29934909 29935268 -223321315 - L3 LINE CR1 -850 727 334 813 210 6 6 chr2 29936090 29936252 -223320331 - FRAM SINE Alu -14 162 1 183 135 54 0 chr2 29936615 29936652 -223319931 - L3 LINE CR1 -286 1291 1253 927 156 0 15 chr2 29936882 29937017 -223319566 + FLAM_C SINE Alu 1 133 0 1144 225 4 22 chr2 29937107 29937334 -223319249 + MER58A DNA MER1_type 2 224 0 2388 80 3 0 chr2 29938292 29938591 -223317992 - AluSp SINE Alu -13 300 1 1894 207 25 53 chr2 29938767 29939241 -223317342 - LTR40b LTR ERVL -1 461 1 222 360 124 19 chr2 29940410 29940571 -223316012 - L3b LINE CR1 -55 1528 1351 259 134 63 24 chr2 29942240 29942367 -223314216 + (CA)n Simple_repeat Simple_repeat 2 133 0 21 57 0 0 chr2 29943000 29943035 -223313548 + AT_rich Low_complexity Low_complexity 1 35 0 816 240 55 28 chr2 29943924 29944357 -223312226 - L1ME LINE L1 -620 5550 5093 2542 65 3 0 chr2 29944357 29944663 -223311920 - AluY SINE Alu -4 307 1 816 240 55 28 chr2 29944663 29944835 -223311748 - L1ME LINE L1 -1077 5093 4927 237 148 49 49 chr2 29944840 29944901 -223311682 - L1 LINE L1 -3354 2792 2732 * 3971 208 35 41 chr2 29944898 29944975 -223311608 - L1MC/D LINE L1 -782 5347 5271 1973 145 51 61 chr2 29944975 29945174 -223311409 - MLT1B LTR MaLR 0 390 195 360 0 0 0 chr2 29945174 29945214 -223311369 + (TG)n Simple_repeat Simple_repeat 2 41 0 1973 145 51 61 chr2 29945214 29945408 -223311175 - MLT1B LTR MaLR -195 195 1 3971 208 35 41 chr2 29945408 29945447 -223311136 - L1MC/D LINE L1 -858 5271 5233 4626 133 21 25 chr2 29945447 29946215 -223310368 - L1MA4 LINE L1 0 6300 5536 3971 208 35 41 chr2 29946215 29947218 -223309365 - L1MC/D LINE L1 -896 5233 4349 460 266 32 40 chr2 29947241 29947353 -223309230 - L1MC/D LINE L1 -3819 2310 2199 2539 66 0 0 chr2 29947353 29947656 -223308927 - AluY SINE Alu -8 303 1 460 266 32 40 chr2 29947656 29947830 -223308753 - L1MC/D LINE L1 -3930 2199 2065 308 246 210 12 chr2 29948167 29948334 -223308249 - L1MC/D LINE L1 -4549 1580 1381 1069 300 133 29 chr2 29948410 29949306 -223307277 - L1MC/D LINE L1 -4864 1255 267 816 153 8 15 chr2 29949953 29950084 -223306499 - FLAM_C SINE Alu -8 135 6 2553 68 0 7 chr2 29951588 29951898 -223304685 - AluY SINE Alu -3 308 1 2006 138 3 10 chr2 29952964 29953268 -223303315 + AluSc SINE Alu 1 302 -7 1110 133 13 0 chr2 29953268 29953426 -223303157 + AluSg/x SINE Alu 132 291 -19 241 284 15 0 chr2 29953632 29953699 -223302884 + L2 LINE L2 3245 3312 -1 305 262 120 45 chr2 29953868 29954019 -223302564 - L1ME4a LINE L1 -4 6117 5979 2210 117 3 3 chr2 29954019 29954317 -223302266 - AluSq SINE Alu -15 298 1 305 262 120 45 chr2 29954317 29954446 -223302137 - L1ME4a LINE L1 -142 5979 5811 1927 146 7 0 chr2 29954636 29954931 -223301652 - AluSx SINE Alu -15 297 1 402 339 80 5 chr2 29955282 29955506 -223301077 + MIR SINE MIR 21 261 -1 235 302 127 16 chr2 29955720 29955846 -223300737 + MIR SINE MIR 53 192 -70 21 71 0 0 chr2 29956465 29956507 -223300076 + AT_rich Low_complexity Low_complexity 1 42 0 237 211 0 0 chr2 29956667 29956719 -223299864 + (TATG)n Simple_repeat Simple_repeat 1 52 0 2164 154 53 53 chr2 29956801 29957235 -223299348 - Tigger2a DNA MER2_type 0 434 1 327 319 90 30 chr2 29958281 29958447 -223298136 - MIR3 SINE MIR -17 191 16 420 272 114 16 chr2 29960113 29960297 -223296286 + L2 LINE L2 3111 3312 -1 2213 104 0 3 chr2 29960721 29961010 -223295573 - AluSx SINE Alu -24 288 1 2760 96 3 3 chr2 29963401 29963764 -223292819 + THE1B LTR MaLR 2 364 0 1715 87 0 5 chr2 29964310 29964528 -223292055 - AluSg SINE Alu -31 279 63 1437 140 40 0 chr2 29965845 29966095 -223290488 + L1MA6 LINE L1 6041 6300 0 278 275 55 18 chr2 29969787 29969896 -223286687 - MIR3 SINE MIR 0 208 96 23 54 0 0 chr2 29970057 29970094 -223286489 + AT_rich Low_complexity Low_complexity 1 37 0 1709 110 10 63 chr2 29970337 29970636 -223285947 - AluSx SINE Alu -11 301 19 1729 125 8 12 chr2 29971318 29971574 -223285009 + AluSx SINE Alu 32 286 -26 195 170 0 0 chr2 29973549 29973596 -223282987 + (CA)n Simple_repeat Simple_repeat 2 48 0 307 272 166 26 chr2 29973759 29974024 -223282559 - L1ME4a LINE L1 -201 5920 5619 565 248 89 30 chr2 29974060 29974330 -223282253 + L2 LINE L2 2262 2547 -767 341 328 109 55 chr2 29974387 29974793 -223281790 - L1ME4a LINE L1 -485 5636 5164 2236 114 10 0 chr2 29974793 29975090 -223281493 - AluSx SINE Alu -12 300 1 341 328 109 55 chr2 29975090 29975391 -223281192 - L1ME4a LINE L1 -957 5164 4881 190 231 0 0 chr2 29975822 29975861 -223280722 - MIR SINE MIR -111 151 113 689 188 118 6 chr2 29976261 29976431 -223280152 + MER53 DNA DNA 1 189 0 247 221 0 63 chr2 29976567 29976662 -223279921 - L1MC4 LINE L1 -1339 6703 6615 * 269 267 0 0 chr2 29976611 29976701 -223279882 + L1MC4 LINE L1 6614 6703 -1339 1234 285 77 44 chr2 29977008 29977342 -223279241 + L2 LINE L2 2200 2521 -792 2128 119 17 0 chr2 29977342 29977635 -223278948 + AluSx SINE Alu 1 298 -14 1234 285 77 44 chr2 29977635 29978171 -223278412 + L2 LINE L2 2521 3106 -207 270 252 46 93 chr2 29978434 29978800 -223277783 - L1MB7 LINE L1 -243 5941 5600 672 182 208 0 chr2 29978854 29979008 -223277575 - MER5A DNA MER1_type -3 186 1 867 236 83 77 chr2 29979161 29979321 -223277262 - HAL1 LINE L1 -960 1547 1389 2256 74 40 3 chr2 29979321 29979618 -223276965 - AluSg1 SINE Alu -1 308 1 867 236 83 77 chr2 29979618 29979949 -223276634 - HAL1 LINE L1 -1118 1389 1053 * 2999 172 42 63 chr2 29979923 29980438 -223276145 - L1MC3 LINE L1 0 7785 7287 2096 123 3 0 chr2 29980438 29980723 -223275860 - AluSq SINE Alu -27 286 1 2999 172 42 63 chr2 29980723 29980900 -223275683 - L1MC3 LINE L1 -498 7287 7108 625 249 102 18 chr2 29980952 29981177 -223275406 - HAL1 LINE L1 -1476 1031 788 1655 226 74 19 chr2 29981223 29981252 -223275331 - MLT1D LTR MaLR -5 500 474 192 40 0 0 chr2 29981252 29981277 -223275306 + (CCAA)n Simple_repeat Simple_repeat 2 26 0 1655 226 74 19 chr2 29981277 29981721 -223274862 - MLT1D LTR MaLR -31 474 1 258 311 48 42 chr2 29981846 29982013 -223274570 - HAL1 LINE L1 -2022 485 318 327 195 49 0 chr2 29982016 29982139 -223274444 + CT-rich Low_complexity Low_complexity 2 130 0 1654 175 0 0 chr2 29982142 29982405 -223274178 - AluJo SINE Alu -49 263 1 354 273 58 32 chr2 29982419 29982573 -223274010 - HAL1 LINE L1 -2220 287 130 264 59 0 0 chr2 29982610 29982644 -223273939 + (TG)n Simple_repeat Simple_repeat 2 35 0 848 198 39 11 chr2 29982688 29982870 -223273713 + MER5A DNA MER1_type 3 189 0 240 376 112 0 chr2 29983829 29983954 -223272629 - L2 LINE L2 0 3272 3134 23 0 0 0 chr2 29984747 29984770 -223271813 + AT_rich Low_complexity Low_complexity 1 23 0 2346 79 13 10 chr2 29985092 29985395 -223271188 + AluSp SINE Alu 1 304 -9 374 241 107 27 chr2 29985970 29986082 -223270501 - MIR SINE MIR -6 256 136 2068 98 0 4 chr2 29986264 29986528 -223270055 - AluSx SINE Alu -14 298 36 24 0 0 0 chr2 29986528 29986552 -223270031 + AT_rich Low_complexity Low_complexity 1 24 0 2132 99 10 0 chr2 29988526 29988818 -223267765 - AluSp SINE Alu -2 311 17 765 188 0 0 chr2 29989532 29989670 -223266913 + FLAM_C SINE Alu 2 139 -4 379 175 133 70 chr2 29990045 29990188 -223266395 + MER5B DNA MER1_type 22 173 -5 201 288 0 15 chr2 29990740 29990806 -223265777 + L2 LINE L2 3205 3269 -3 331 224 12 12 chr2 29991335 29991420 -223265163 - MIR SINE MIR -115 147 63 386 161 65 0 chr2 29992430 29992585 -223263998 + (TG)n Simple_repeat Simple_repeat 1 165 0 287 154 58 10 chr2 29992605 29992709 -223263874 + (TG)n Simple_repeat Simple_repeat 1 109 0 1229 167 47 33 chr2 29992848 29993124 -223263459 + AluSc SINE Alu 1 280 -19 310 307 166 10 chr2 29993512 29993717 -223262866 + MIR SINE MIR 5 241 -21 183 80 0 0 chr2 29993761 29993786 -223262797 + (GAAA)n Simple_repeat Simple_repeat 3 27 0 537 255 45 44 chr2 29993803 29994057 -223262526 + MIR SINE MIR 8 262 0 587 227 33 20 chr2 29995458 29995608 -223260975 + MER103 DNA DNA 2 153 -13 512 194 37 0 chr2 29995742 29995850 -223260733 + MIR SINE MIR 80 191 -71 258 278 91 31 chr2 29996572 29996715 -223259868 + MIR3 SINE MIR 51 201 -7 207 162 0 0 chr2 29996960 29996997 -223259586 + (TTA)n Simple_repeat Simple_repeat 3 39 0 192 384 0 0 chr2 29997237 29997310 -223259273 - L2 LINE L2 -7 3265 3193 949 201 30 35 chr2 29998018 29998217 -223258366 - MER20 DNA MER1_type 0 219 22 408 275 42 0 chr2 29998311 29998431 -223258152 - L2 LINE L2 -4 3309 3185 2336 244 92 22 chr2 29998494 29999327 -223257256 - L2 LINE L2 -419 2895 2004 313 296 10 0 chr2 29999435 29999533 -223257050 + L2 LINE L2 3170 3268 -4 182 333 50 0 chr2 29999727 29999826 -223256757 - MIR SINE MIR -56 152 49 716 146 73 8 chr2 29999831 29999954 -223256629 + FLAM_C SINE Alu 2 132 -1 1464 201 0 52 chr2 29999964 30000273 -223256310 + AluJo SINE Alu 1 293 -19 1233 91 0 0 chr2 30000959 30001113 -223255470 + AluSx SINE Alu 1 154 -158 1378 215 36 4 chr2 30002231 30002510 -223254073 + AluJb SINE Alu 1 288 -24 243 290 80 6 chr2 30002510 30002672 -223253911 + L1ME4a LINE L1 5156 5329 -817 2077 128 34 0 chr2 30002736 30003033 -223253550 + AluSx SINE Alu 1 307 -5 1379 239 151 25 chr2 30003026 30003625 -223252958 + L1ME4a LINE L1 5384 6056 -65 213 39 0 0 chr2 30003814 30003840 -223252743 + (T)n Simple_repeat Simple_repeat 1 26 0 2320 100 3 7 chr2 30004147 30004457 -223252126 - AluSc SINE Alu 0 309 1 350 179 179 0 chr2 30005093 30005171 -223251412 + MER8 DNA MER2_type 142 233 -6 1644 198 134 33 chr2 30005442 30005896 -223250687 - MLT1D LTR MaLR -1 504 5 185 143 82 0 chr2 30005918 30005967 -223250616 - L2 LINE L2 -14 3258 3206 409 287 116 0 chr2 30006483 30006612 -223249971 + MIR SINE MIR 21 164 -98 256 303 134 7 chr2 30007302 30007444 -223249139 - MIR3 SINE MIR -16 192 33 311 252 35 52 chr2 30007821 30007936 -223248647 + MIR SINE MIR 70 182 -80 503 268 20 0 chr2 30007975 30008110 -223248473 + MER5A DNA MER1_type 1 153 -36 204 313 101 20 chr2 30009018 30009117 -223247466 - L2 LINE L2 -26 3287 3181 212 273 91 0 chr2 30009223 30009300 -223247283 + L2 LINE L2 3166 3249 -23 222 37 0 0 chr2 30010263 30010290 -223246293 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1487 171 9 101 chr2 30010403 30010731 -223245852 - AluJo SINE Alu 0 302 5 193 371 11 45 chr2 30010892 30010981 -223245602 + MIR SINE MIR 20 105 -157 1686 122 29 31 chr2 30011606 30011932 -223244651 + THE1C LTR MaLR 50 375 0 478 313 67 49 chr2 30012181 30012405 -223244178 + MIR SINE MIR 20 247 -15 254 256 77 68 chr2 30012995 30013141 -223243442 - MER5A DNA MER1_type -7 182 26 221 343 114 0 chr2 30013173 30013278 -223243305 - MIR SINE MIR -62 146 30 1727 180 25 0 chr2 30015305 30015589 -223240994 - AluJo SINE Alu -21 291 1 1883 252 104 35 chr2 30015605 30016590 -223239993 - L1MC5 LINE L1 -501 7460 6493 323 323 68 33 chr2 30016997 30017304 -223239279 - HAL1b LINE L1 -862 486 169 224 149 21 0 chr2 30017857 30017904 -223238679 + GA-rich Low_complexity Low_complexity 1 48 0 575 214 40 8 chr2 30018297 30018423 -223238160 + MIR SINE MIR 20 149 -59 334 357 40 2 chr2 30018992 30019142 -223237441 - MIR3 SINE MIR -36 172 34 180 203 40 108 chr2 30019225 30019299 -223237284 - MIR SINE MIR -108 154 86 2306 100 159 8 chr2 30019409 30019780 -223236803 + MSTA LTR MaLR 2 428 0 374 306 48 7 chr2 30020771 30020918 -223235665 + L1ME4a LINE L1 5969 6121 0 236 330 205 0 chr2 30022220 30022332 -223234251 - L2 LINE L2 -1 3271 3137 807 295 86 26 chr2 30023154 30023574 -223233009 - LTR16B LTR ERVL -2 462 18 371 293 147 13 chr2 30024135 30024285 -223232298 + MIR SINE MIR 93 262 0 682 280 196 56 chr2 30025310 30025729 -223230854 + L3 LINE CR1 800 1159 -418 2421 91 3 3 chr2 30025729 30026036 -223230547 + AluSq SINE Alu 1 307 -6 682 280 196 56 chr2 30026036 30026276 -223230307 + L3 LINE CR1 1159 1551 -26 234 81 0 0 chr2 30027232 30027269 -223229314 + (CAGGG)n Simple_repeat Simple_repeat 4 40 0 326 307 36 14 chr2 30028014 30028154 -223228429 + MIR SINE MIR 69 211 -51 1170 172 172 10 chr2 30028515 30028806 -223227777 + MER2 DNA MER2_type 1 338 -7 2238 83 20 3 chr2 30029888 30030190 -223226393 + AluSx SINE Alu 1 307 -5 238 171 98 110 chr2 30031460 30031542 -223225041 - MLT2F LTR ERVL -2 661 581 1858 191 0 10 chr2 30031953 30032267 -223224316 - AluJo SINE Alu -1 311 1 204 323 23 114 chr2 30032597 30032817 -223223766 - L2 LINE L2 -81 3191 2992 361 284 18 9 chr2 30035569 30035678 -223220905 + MIR SINE MIR 102 211 -51 228 67 0 0 chr2 30037763 30037793 -223218790 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 254 306 37 37 chr2 30037805 30037913 -223218670 - L2 LINE L2 -28 3244 3137 184 333 48 12 chr2 30038194 30038278 -223218305 + L2 LINE L2 3180 3266 -47 206 292 0 0 chr2 30038322 30038370 -223218213 + GA-rich Low_complexity Low_complexity 1 48 0 243 146 0 0 chr2 30038592 30038633 -223217950 + (GGAA)n Simple_repeat Simple_repeat 4 44 0 369 286 79 21 chr2 30039238 30039378 -223217205 - MIR3 SINE MIR -41 167 20 198 333 52 52 chr2 30040211 30040346 -223216237 + L2 LINE L2 3119 3253 -19 623 169 0 1 chr2 30041775 30041905 -223214678 - L1MB1 LINE L1 -3 6165 6057 357 276 75 22 chr2 30042770 30042920 -223213663 + MIR SINE MIR 2 161 -47 273 303 110 0 chr2 30043685 30043794 -223212789 - MIR SINE MIR -36 226 106 928 236 23 16 chr2 30044455 30044713 -223211870 + MIR SINE MIR 3 262 0 674 248 50 0 chr2 30044822 30044983 -223211600 + MER63A DNA MER1_type 13 181 -29 301 58 39 0 chr2 30045382 30045434 -223211149 + (TG)n Simple_repeat Simple_repeat 2 55 0 245 294 0 15 chr2 30045518 30045586 -223210997 + MIR3 SINE MIR 5 71 -137 2402 81 13 7 chr2 30045826 30046133 -223210450 + AluY SINE Alu 1 309 -2 243 0 0 0 chr2 30046274 30046301 -223210282 + (TC)n Simple_repeat Simple_repeat 2 28 0 373 238 0 0 chr2 30047051 30047131 -223209452 - MER116 DNA Mariner 0 80 1 2406 99 14 91 chr2 30047643 30048085 -223208498 - LTR8 LTR ERV1 -283 408 1 256 254 130 65 chr2 30048636 30048821 -223207762 - MIR SINE MIR -36 226 30 256 265 29 69 chr2 30049974 30050076 -223206507 - MIR SINE MIR -74 188 91 719 295 40 9 chr2 30051031 30051258 -223205325 - MIR SINE MIR 0 262 29 186 200 55 73 chr2 30051447 30051502 -223205081 + MIR SINE MIR 159 212 -50 608 179 237 32 chr2 30052164 30052320 -223204263 + MER5A DNA MER1_type 1 188 -1 372 236 225 7 chr2 30052924 30053076 -223203507 + MIR SINE MIR 20 204 -58 224 263 34 68 chr2 30053835 30053953 -223202630 + MIR SINE MIR 107 220 -42 822 274 93 68 chr2 30054087 30054695 -223201888 - L1ME4a LINE L1 -3 6118 5527 396 0 0 0 chr2 30054695 30054739 -223201844 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 1761 146 0 57 chr2 30054741 30055042 -223201541 - AluJb SINE Alu -28 284 1 822 274 93 68 chr2 30055042 30055075 -223201508 - L1ME4a LINE L1 -594 5527 5458 384 123 0 74 chr2 30055083 30055164 -223201419 - MADE1 DNA Mariner -5 75 1 190 393 41 8 chr2 30055238 30055360 -223201223 + L2 LINE L2 2941 3066 -206 281 246 18 88 chr2 30055515 30055629 -223200954 - MLT1G LTR MaLR -475 115 10 182 212 0 0 chr2 30055748 30055781 -223200802 - L2 LINE L2 -18 3295 3263 350 264 28 38 chr2 30056233 30056339 -223200244 - MIR3 SINE MIR -22 186 82 1732 157 33 52 chr2 30056341 30056646 -223199937 + AluJo SINE Alu 1 299 -13 2350 91 0 13 chr2 30056670 30056978 -223199605 + AluY SINE Alu 1 304 -7 1785 161 33 14 chr2 30057239 30057600 -223198983 - L1MB2 LINE L1 0 6171 5804 672 171 0 36 chr2 30057600 30057740 -223198843 - L1MB2 LINE L1 -578 5593 5459 915 183 0 43 chr2 30058224 30058388 -223198195 - FRAM SINE Alu -9 157 1 575 319 80 17 chr2 30058788 30059089 -223197494 - L2 LINE L2 0 3313 2994 220 318 0 0 chr2 30059188 30059254 -223197329 + MIR SINE MIR 188 253 -9 326 334 140 14 chr2 30060010 30060540 -223196043 + L2 LINE L2 2449 3044 -269 1876 128 7 4 chr2 30060549 30060822 -223195761 - AluSx SINE Alu -16 296 23 287 270 164 40 chr2 30061043 30061195 -223195388 - L2 LINE L2 -13 3259 3089 307 326 7 43 chr2 30062148 30062286 -223194297 - MER5A DNA MER1_type 0 189 57 434 280 48 8 chr2 30062359 30062484 -223194099 - MIR3 SINE MIR -68 140 11 207 327 0 0 chr2 30064010 30064062 -223192521 + polypyrimidine Low_complexity Low_complexity 2 53 0 243 0 0 0 chr2 30064607 30064634 -223191949 + (TG)n Simple_repeat Simple_repeat 2 28 0 207 200 0 22 chr2 30064665 30064710 -223191873 + GA-rich Low_complexity Low_complexity 4 47 0 201 258 0 97 chr2 30066350 30066412 -223190171 - MIR3 SINE MIR -2 206 151 192 125 0 0 chr2 30066817 30066849 -223189734 + (CACCC)n Simple_repeat Simple_repeat 3 34 0 263 283 81 10 chr2 30067832 30067931 -223188652 - MIR SINE MIR -28 234 129 22 0 0 0 chr2 30068803 30068825 -223187758 + AT_rich Low_complexity Low_complexity 1 22 0 450 309 128 5 chr2 30069490 30069694 -223186889 - MIR SINE MIR -32 230 2 2361 94 10 0 chr2 30070603 30070911 -223185672 - AluY SINE Alu 0 311 1 219 336 46 23 chr2 30070946 30071077 -223185506 - MIR SINE MIR -57 151 18 3053 118 43 4 chr2 30071152 30071620 -223184963 + LTR19A LTR ERV1 1 486 0 201 133 0 0 chr2 30071854 30071884 -223184699 + (TGGA)n Simple_repeat Simple_repeat 4 33 0 1831 150 19 26 chr2 30072722 30073029 -223183554 - AluSx SINE Alu -7 305 1 1634 136 7 55 chr2 30073040 30073348 -223183235 - AluSx SINE Alu -19 293 1 334 294 34 45 chr2 30073884 30074061 -223182522 - MER5B DNA MER1_type 0 178 4 445 169 12 27 chr2 30074429 30074533 -223182050 + MLT1J1 LTR MaLR 28 130 -279 285 286 71 32 chr2 30075300 30075454 -223181129 + MLT1J2 LTR MaLR 280 439 -11 2225 97 0 3 chr2 30076158 30076496 -223180087 + AluSx SINE Alu 3 312 0 366 298 76 8 chr2 30076502 30076633 -223179950 + MIR SINE MIR 53 192 -70 240 269 90 0 chr2 30077672 30077739 -223178844 + MIR SINE MIR 94 166 -96 1853 150 32 35 chr2 30078566 30078879 -223177704 + AluJo SINE Alu 1 312 0 626 238 18 12 chr2 30078977 30079145 -223177438 + MIR SINE MIR 93 261 -1 436 265 73 0 chr2 30080044 30080195 -223176388 + MARNA DNA Mariner 9 170 -416 321 360 20 0 chr2 30080794 30080894 -223175689 - L2 LINE L2 -2 3270 3169 612 266 30 12 chr2 30082171 30082340 -223174243 - MIR SINE MIR -71 191 20 2132 140 0 0 chr2 30083720 30084027 -223172556 - AluSx SINE Alu -5 307 1 201 292 79 0 chr2 30084688 30084777 -223171806 + L2 LINE L2 3168 3263 -9 404 167 19 19 chr2 30085605 30085713 -223170870 + GA-rich Low_complexity Low_complexity 2 109 0 608 214 101 36 chr2 30085811 30085979 -223170604 + MIR SINE MIR 84 262 0 532 301 14 7 chr2 30087335 30087481 -223169102 - MIR SINE MIR -108 154 8 192 299 0 46 chr2 30087579 30087666 -223168917 + L3b LINE CR1 1137 1219 -364 239 233 132 82 chr2 30088114 30088275 -223168308 + MIR3 SINE MIR 2 170 -62 236 237 17 17 chr2 30088636 30088695 -223167888 + MIR SINE MIR 17 75 -133 397 256 0 0 chr2 30088744 30088834 -223167749 - MER96 DNA MER1_type? -85 90 1 645 272 28 11 chr2 30088838 30089018 -223167565 + MIR SINE MIR 68 250 -12 377 269 24 46 chr2 30089722 30089874 -223166709 + MIR SINE MIR 36 183 -62 310 328 57 23 chr2 30090108 30090285 -223166298 - MIR3 SINE MIR -24 184 2 188 176 0 0 chr2 30090895 30090929 -223165654 + L2 LINE L2 3257 3290 -23 210 200 20 20 chr2 30090965 30091015 -223165568 + L2 LINE L2 3262 3311 -2 247 250 13 13 chr2 30091298 30091374 -223165209 + GA-rich Low_complexity Low_complexity 4 79 0 2000 110 51 0 chr2 30093292 30093565 -223163018 + AluSx SINE Alu 1 287 -25 206 295 16 0 chr2 30094154 30094215 -223162368 - MIR SINE MIR -56 152 91 393 293 45 51 chr2 30094618 30094775 -223161808 + MIR SINE MIR 12 167 -95 502 223 8 62 chr2 30095588 30095718 -223160865 - MIR3 SINE MIR -39 169 47 318 302 174 7 chr2 30095779 30095928 -223160655 + MIR3 SINE MIR 10 183 -25 210 209 23 0 chr2 30098833 30098876 -223157707 - L2 LINE L2 -1 3312 3269 346 270 155 29 chr2 30098892 30099066 -223157517 + MIR SINE MIR 10 205 -57 2342 97 0 19 chr2 30099728 30100036 -223156547 + AluSx SINE Alu 1 302 -10 249 273 124 41 chr2 30100807 30100928 -223155655 + L2 LINE L2 3137 3267 -5 217 391 16 0 chr2 30101454 30101518 -223155065 - L2 LINE L2 -92 3180 3116 2460 90 0 0 chr2 30101696 30101997 -223154586 + AluSq SINE Alu 1 301 -12 5153 136 14 28 chr2 30102268 30103500 -223153083 + L1PA16 LINE L1 4925 6151 -15 449 150 0 62 chr2 30103596 30103676 -223152907 + MER5A DNA MER1_type 1 75 -114 2201 112 3 0 chr2 30103676 30103963 -223152620 + AluSg SINE Alu 1 288 -22 799 289 77 35 chr2 30104326 30104703 -223151880 - L3 LINE CR1 -73 1504 1112 2447 70 7 7 chr2 30105196 30105496 -223151087 + AluY SINE Alu 1 300 -11 768 295 51 17 chr2 30106315 30106552 -223150031 + MIR SINE MIR 2 246 -16 197 244 81 58 chr2 30106636 30106722 -223149861 + L2 LINE L2 3153 3240 -32 22 0 0 0 chr2 30107743 30107765 -223148818 + AT_rich Low_complexity Low_complexity 1 22 0 421 242 199 25 chr2 30108352 30108513 -223148070 + MER5A DNA MER1_type 1 189 0 192 276 0 35 chr2 30109525 30109583 -223147000 + MIR SINE MIR 89 144 -118 227 240 0 0 chr2 30109614 30109664 -223146919 + L2 LINE L2 3223 3272 0 558 283 11 13 chr2 30110295 30110462 -223146121 - MIR3 SINE MIR -67 141 9 766 242 72 92 chr2 30110641 30110976 -223145607 + MLT1I LTR MaLR 74 401 -8 2121 108 0 0 chr2 30111741 30112040 -223144543 + AluSq SINE Alu 14 312 0 486 299 32 13 chr2 30112208 30112365 -223144218 + MIR SINE MIR 33 192 -70 510 240 122 5 chr2 30113097 30113260 -223143323 + MER5A DNA MER1_type 4 189 0 357 208 78 58 chr2 30113551 30113705 -223142878 + L1ME4a LINE L1 5961 6117 -4 397 237 191 8 chr2 30114545 30114676 -223141907 - MIR SINE MIR 0 262 108 669 271 55 25 chr2 30114816 30115052 -223141531 + MIR SINE MIR 13 255 -7 305 303 0 46 chr2 30115455 30115564 -223141019 + MIR SINE MIR 42 145 -117 448 167 58 58 chr2 30116544 30116664 -223139919 + L1MB8 LINE L1 5413 5532 -642 925 155 96 46 chr2 30116671 30116910 -223139673 + L1MB8 LINE L1 5928 6178 0 181 313 15 45 chr2 30117495 30117562 -223139021 + MIR SINE MIR 29 93 -169 180 0 0 0 chr2 30118176 30118196 -223138387 + (TTTTTA)n Simple_repeat Simple_repeat 2 21 0 228 228 0 0 chr2 30118702 30118759 -223137824 + (CA)n Simple_repeat Simple_repeat 1 57 0 503 272 178 0 chr2 30122850 30123030 -223133553 - MIR SINE MIR -16 246 35 267 278 0 42 chr2 30123057 30123129 -223133454 + MIR SINE MIR 36 104 -158 231 238 95 0 chr2 30124157 30124220 -223132363 - MIR SINE MIR -111 151 83 317 331 106 0 chr2 30124437 30124579 -223132004 - MIR SINE MIR -6 256 100 519 216 201 22 chr2 30124810 30125078 -223131505 - L1ME4a LINE L1 -3 6118 5803 289 226 25 63 chr2 30125097 30125256 -223131327 - L1ME4a LINE L1 0 6121 5969 198 314 183 15 chr2 30125763 30125900 -223130683 - L3 LINE CR1 -120 1457 1298 219 36 0 0 chr2 30126544 30126572 -223130011 + (CA)n Simple_repeat Simple_repeat 2 29 0 474 272 0 0 chr2 30126684 30126787 -223129796 - MER5A DNA MER1_type -83 106 4 244 311 33 0 chr2 30126892 30126982 -223129601 + MIR SINE MIR 52 144 -118 267 306 20 27 chr2 30127145 30127292 -223129291 + HAL1b LINE L1 313 458 -890 320 253 106 119 chr2 30127303 30127758 -223128825 - L1 LINE L1 -2839 3307 2859 2110 139 10 0 chr2 30127812 30128121 -223128462 + AluSx SINE Alu 1 312 0 318 184 141 8 chr2 30130918 30131041 -223125542 + MLT1L LTR MaLR 211 435 -180 621 297 81 0 chr2 30131680 30131889 -223124694 + L2 LINE L2 3083 3308 -5 217 320 0 0 chr2 30132166 30132244 -223124339 + (CA)n Simple_repeat Simple_repeat 1 78 0 2167 142 7 0 chr2 30132265 30132575 -223124008 - AluSx SINE Alu 0 312 1 2324 89 10 20 chr2 30132963 30133290 -223123293 + AluSq SINE Alu 1 313 0 255 290 48 90 chr2 30133807 30133952 -223122631 - MIR SINE MIR -47 215 77 1766 252 91 27 chr2 30134159 30134707 -223121876 + MLT1E LTR MaLR 6 588 -5 307 277 0 24 chr2 30135742 30135825 -223120758 + L2 LINE L2 3184 3264 -8 394 250 101 26 chr2 30136003 30136150 -223120433 + MIR SINE MIR 26 172 -36 525 264 123 33 chr2 30136157 30136369 -223120214 - MIR SINE MIR -30 232 2 305 208 113 42 chr2 30137531 30137643 -223118940 + MIR SINE MIR 66 189 -19 205 200 44 0 chr2 30137618 30137663 -223118920 + L2 LINE L2 3207 3253 -19 * 518 238 26 79 chr2 30137754 30137943 -223118640 - MER5A DNA MER1_type -4 185 7 364 165 10 10 chr2 30139366 30139463 -223117120 + GA-rich Low_complexity Low_complexity 2 98 0 198 279 231 27 chr2 30140093 30140240 -223116343 + MIR SINE MIR 7 183 -79 1442 272 21 12 chr2 30144149 30144576 -223112007 + L1MB7 LINE L1 5745 6175 -9 205 270 48 16 chr2 30147371 30147434 -223109149 + MIR SINE MIR 31 95 -167 208 275 114 69 chr2 30151773 30151904 -223104679 - L2 LINE L2 -1018 2296 2160 275 308 0 100 chr2 30152663 30152793 -223103790 + MIR SINE MIR 75 191 -71 624 208 71 12 chr2 30152842 30153010 -223103573 - MER5B DNA MER1_type 0 178 1 209 395 0 0 chr2 30203735 30203816 -223052767 - MIR SINE MIR -95 113 33 5204 145 25 19 chr2 30203999 30204896 -223051687 - MER4D LTR ERV1 0 903 2 196 121 0 0 chr2 30205987 30206020 -223050563 - L2 LINE L2 -10 3303 3271 520 309 20 0 chr2 30206107 30206259 -223050324 - L2 LINE L2 -1 3271 3117 441 169 0 0 chr2 30206732 30206815 -223049768 + (TG)n Simple_repeat Simple_repeat 2 84 0 244 256 12 0 chr2 30207946 30208028 -223048555 - L1ME4a LINE L1 -70 6051 5969 689 286 65 74 chr2 30208120 30208568 -223048015 - L1ME4a LINE L1 -311 5810 5367 204 40 0 0 chr2 30208568 30208593 -223047990 + (TG)n Simple_repeat Simple_repeat 2 26 0 14645 130 33 25 chr2 30208752 30211146 -223045437 + Tigger1 DNA MER2_type 1 2413 -5 202 216 0 0 chr2 30211999 30212036 -223044547 + (TGAA)n Simple_repeat Simple_repeat 3 39 0 3967 30 9 0 chr2 30212137 30212602 -223043981 - L1PA7 LINE L1 -5 6149 5681 2216 114 0 0 chr2 30212887 30213176 -223043407 + AluSx SINE Alu 1 289 -23 275 276 46 35 chr2 30213801 30213888 -223042695 - MIR3 SINE MIR -12 196 109 490 289 70 0 chr2 30213907 30214063 -223042520 + MER5B DNA MER1_type 5 171 -7 192 211 96 0 chr2 30214585 30214637 -223041946 + MIR SINE MIR 205 261 -1 378 42 0 0 chr2 30214707 30214755 -223041828 + (CA)n Simple_repeat Simple_repeat 1 48 0 195 228 0 88 chr2 30216442 30216499 -223040084 + L2 LINE L2 3193 3244 -28 2135 112 0 14 chr2 30216676 30216998 -223039585 + AluY SINE Alu 1 318 0 423 0 0 0 chr2 30217811 30217858 -223038725 + (TG)n Simple_repeat Simple_repeat 2 48 0 2110 117 4 4 chr2 30219034 30219357 -223037226 - AluSx SINE Alu 0 323 1 272 190 13 0 chr2 30219639 30219718 -223036865 + CT-rich Low_complexity Low_complexity 1 80 0 251 348 30 18 chr2 30219758 30219922 -223036661 - MIR3 SINE MIR -7 201 36 241 321 93 29 chr2 30222619 30222759 -223033824 + L2 LINE L2 3123 3271 -1 2530 65 0 3 chr2 30224589 30224897 -223031686 - AluY SINE Alu -4 307 1 267 295 39 0 chr2 30225190 30225268 -223031315 + (CACG)n Simple_repeat Simple_repeat 4 84 0 299 298 199 7 chr2 30225966 30226107 -223030476 + MER5A DNA MER1_type 9 176 -13 1182 166 0 0 chr2 30226945 30227120 -223029463 - AluJb SINE Alu -1 311 137 231 36 0 0 chr2 30227517 30227545 -223029038 + (T)n Simple_repeat Simple_repeat 1 28 0 589 201 176 25 chr2 30227951 30228155 -223028428 - MIR SINE MIR -13 249 15 191 86 0 29 chr2 30228196 30228231 -223028352 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 300 293 12 0 chr2 30228502 30228584 -223027999 - L3 LINE CR1 -10 1567 1485 215 270 106 74 chr2 30229126 30229315 -223027268 + MIR SINE MIR 20 214 -48 1359 186 134 3 chr2 30230465 30230516 -223026067 + MER63C DNA MER1_type 1 44 -1016 189 0 0 0 chr2 30230516 30230537 -223026046 + (TG)n Simple_repeat Simple_repeat 2 22 0 1359 186 134 3 chr2 30230537 30230792 -223025791 + MER63C DNA MER1_type 44 347 -583 2423 234 80 100 chr2 30230992 30231937 -223024646 - HAL1 LINE L1 -8 2499 1584 2373 75 0 19 chr2 30231937 30232244 -223024339 + AluY SINE Alu 1 301 -10 2423 234 80 100 chr2 30232244 30232562 -223024021 - HAL1 LINE L1 -923 1584 1261 402 254 0 0 chr2 30232562 30232704 -223023879 + (TG)n Simple_repeat Simple_repeat 2 143 0 667 169 0 22 chr2 30232715 30232899 -223023684 + (TG)n Simple_repeat Simple_repeat 1 180 0 2178 277 76 33 chr2 30232938 30234006 -223022577 - HAL1 LINE L1 -1256 1251 97 2182 144 0 0 chr2 30234637 30234949 -223021634 + AluJb SINE Alu 1 312 0 312 120 0 0 chr2 30235011 30235061 -223021522 + (CA)n Simple_repeat Simple_repeat 1 50 0 27 0 0 0 chr2 30235061 30235088 -223021495 + AT_rich Low_complexity Low_complexity 1 27 0 470 255 0 10 chr2 30236284 30236386 -223020197 + MER81 DNA DNA 1 101 -13 356 241 139 38 chr2 30236518 30236676 -223019907 + MIR SINE MIR 79 252 -10 243 354 16 8 chr2 30237027 30237154 -223019429 - L2 LINE L2 -8 3264 3137 307 327 113 6 chr2 30237565 30237733 -223018850 + L1ME LINE L1 5670 5855 -266 834 190 85 35 chr2 30237803 30238003 -223018580 - MER63A DNA MER1_type 0 210 1 27 0 0 0 chr2 30238108 30238135 -223018448 + AT_rich Low_complexity Low_complexity 1 27 0 827 171 0 0 chr2 30238160 30238289 -223018294 + FLAM_C SINE Alu 2 130 -3 2461 127 77 10 chr2 30238547 30238948 -223017635 - MSTA LTR MaLR 0 428 1 207 286 0 0 chr2 30239195 30239258 -223017325 + L2 LINE L2 3210 3272 0 568 239 161 0 chr2 30239275 30239455 -223017128 + MER63A DNA MER1_type 1 209 -1 640 238 48 6 chr2 30240492 30240660 -223015923 - MIR SINE MIR -60 202 28 2497 70 0 3 chr2 30240662 30240964 -223015619 - AluSc SINE Alu -8 301 1 616 275 34 24 chr2 30243293 30243500 -223013083 - MIR SINE MIR -12 250 42 264 250 0 0 chr2 30243540 30243604 -223012979 + (TG)n Simple_repeat Simple_repeat 2 65 0 234 150 0 0 chr2 30244314 30244354 -223012229 + (CACG)n Simple_repeat Simple_repeat 4 43 0 1865 139 7 4 chr2 30245492 30245765 -223010818 + AluSx SINE Alu 32 305 -7 568 206 0 75 chr2 30245918 30246078 -223010505 + MER58C DNA MER1_type 68 215 0 210 228 53 0 chr2 30246078 30246135 -223010448 + L2 LINE L2 2742 2801 -513 249 57 0 0 chr2 30246150 30246185 -223010398 + (CA)n Simple_repeat Simple_repeat 2 36 0 406 200 33 0 chr2 30246203 30246293 -223010290 + MER53 DNA DNA 96 188 -1 447 247 105 6 chr2 30246307 30246463 -223010120 + MIR SINE MIR 2 176 -32 583 327 142 13 chr2 30246510 30246944 -223009639 + L2 LINE L2 2804 3299 -14 2203 98 20 14 chr2 30246944 30247241 -223009342 + AluSx SINE Alu 1 299 -13 583 327 142 13 chr2 30247241 30247256 -223009327 + L2 LINE L2 3299 3311 -2 552 306 63 66 chr2 30247337 30247670 -223008913 - L2 LINE L2 -54 3218 2887 184 311 44 23 chr2 30248031 30248151 -223008432 + MIR3 SINE MIR 106 231 -31 1173 195 0 0 chr2 30249056 30249269 -223007314 - AluJo SINE Alu 0 307 95 310 327 10 10 chr2 30249613 30249717 -223006866 + MIR3 SINE MIR 12 115 -93 1389 163 139 39 chr2 30251054 30251123 -223005460 - MER47A DNA MER2_type -1958 365 304 2729 32 3 0 chr2 30251123 30251432 -223005151 + AluY SINE Alu 1 310 -1 1389 163 139 39 chr2 30251432 30251693 -223004890 - MER47A DNA MER2_type -2019 304 2 239 167 21 0 chr2 30251764 30251812 -223004771 + MIR SINE MIR 103 151 -111 2064 140 35 6 chr2 30252320 30252663 -223003920 + MER7C DNA MER2_type 2 354 -248 224 292 0 31 chr2 30252663 30252697 -223003886 + CT-rich Low_complexity Low_complexity 3 36 -29 2092 103 0 24 chr2 30252697 30252988 -223003595 - AluSg SINE Alu -26 284 1 224 292 0 31 chr2 30252988 30253018 -223003565 + CT-rich Low_complexity Low_complexity 36 65 0 879 59 0 0 chr2 30253022 30253140 -223003443 + (TTCC)n Simple_repeat Simple_repeat 1 118 0 1309 181 0 0 chr2 30253180 30253390 -223003193 - AluJo SINE Alu -102 210 1 1557 136 27 27 chr2 30253392 30253650 -223002933 + MER7C DNA MER2_type 345 602 -1 868 253 0 5 chr2 30254472 30254658 -223001925 + MER5A DNA MER1_type 5 189 0 1893 117 4 0 chr2 30254761 30255018 -223001565 + AluSx SINE Alu 36 293 -19 242 313 9 35 chr2 30255077 30255192 -223001391 + MER5A DNA MER1_type 50 161 -28 479 252 161 0 chr2 30255226 30255381 -223001202 + MER5A DNA MER1_type 10 189 0 202 270 0 48 chr2 30256069 30256132 -223000451 + L3b LINE CR1 1517 1576 -7 242 284 0 30 chr2 30256132 30256199 -223000384 - L2 LINE L2 -16 3297 3233 223 301 132 42 chr2 30256588 30256801 -222999782 + L3 LINE CR1 1339 1570 -7 716 271 19 23 chr2 30257536 30257798 -222998785 + MIR SINE MIR 2 262 0 307 319 158 19 chr2 30257923 30258183 -222998400 - L2 LINE L2 0 3272 2977 378 280 119 31 chr2 30258473 30258666 -222997917 + MIR SINE MIR 39 248 -14 819 250 57 55 chr2 30258759 30259072 -222997511 + MLT1G1 LTR MaLR 1 280 -250 505 183 0 0 chr2 30259072 30259154 -222997429 + AluJb SINE Alu 203 284 -28 1078 194 97 0 chr2 30259204 30259421 -222997162 + MLT1G1 LTR MaLR 358 595 0 295 331 33 0 chr2 30259529 30259650 -222996933 + MIR3 SINE MIR 60 184 -24 267 340 11 0 chr2 30261239 30261333 -222995250 - MIR3 SINE MIR -21 187 93 2735 152 83 25 chr2 30262270 30262737 -222993846 - L1MC1 LINE L1 -2 6331 5828 2197 131 0 6 chr2 30262737 30263051 -222993532 - AluSx SINE Alu 0 312 1 2735 152 83 25 chr2 30263051 30263110 -222993473 - L1MC1 LINE L1 -505 5828 5774 398 262 24 0 chr2 30263306 30263474 -222993109 + (TCTG)n Simple_repeat Simple_repeat 1 171 0 232 285 76 62 chr2 30264018 30264162 -222992421 - MIR SINE MIR -70 192 47 2174 116 0 7 chr2 30264193 30264494 -222992089 - AluSc SINE Alu -10 299 1 1855 168 6 19 chr2 30264501 30264816 -222991767 - AluJo SINE Alu -1 311 1 210 256 39 93 chr2 30265505 30265634 -222990949 + L2 LINE L2 3151 3272 0 324 359 55 13 chr2 30266075 30266312 -222990271 - L3 LINE CR1 -405 1172 926 522 287 84 48 chr2 30266450 30266913 -222989670 - L1ME4a LINE L1 -58 6063 5584 208 208 97 69 chr2 30266994 30267066 -222989517 - L3 LINE CR1 -878 699 626 208 292 31 31 chr2 30267063 30267128 -222989455 - L2 LINE L2 -2 3270 3206 643 223 211 4 chr2 30267380 30267645 -222988938 - L1ME4a LINE L1 -16 6105 5786 659 293 50 25 chr2 30267673 30267831 -222988752 + MIR SINE MIR 18 185 -77 2494 133 5 8 chr2 30267831 30268207 -222988376 - THE1C LTR MaLR 0 375 1 659 293 50 25 chr2 30268207 30268287 -222988296 + MIR SINE MIR 185 262 0 183 129 0 0 chr2 30268287 30268318 -222988265 + (CTA)n Simple_repeat Simple_repeat 1 31 0 27 29 0 0 chr2 30268796 30268830 -222987753 + AT_rich Low_complexity Low_complexity 1 34 0 47 53 0 0 chr2 30268894 30268969 -222987614 + AT_rich Low_complexity Low_complexity 1 75 0 338 322 25 0 chr2 30268973 30269091 -222987492 - L1ME4a LINE L1 -2331 5477 5357 368 342 0 0 chr2 30269307 30269424 -222987159 - L3 LINE CR1 -1278 299 183 690 306 20 28 chr2 30270112 30270360 -222986223 - MIR SINE MIR 0 262 17 2058 166 14 17 chr2 30270835 30271196 -222985387 - MLT1A1 LTR MaLR -3 362 3 384 208 47 28 chr2 30273862 30273968 -222982615 + L1ME4a LINE L1 5984 6091 -30 295 207 58 0 chr2 30274385 30274472 -222982111 + CT-rich Low_complexity Low_complexity 4 95 0 207 342 17 25 chr2 30275077 30275197 -222981386 + L2 LINE L2 2964 3082 -190 258 319 44 0 chr2 30275318 30275431 -222981152 + L2 LINE L2 3155 3272 0 510 284 57 26 chr2 30275432 30275626 -222980957 + MIR SINE MIR 57 256 -6 224 382 65 12 chr2 30275756 30275926 -222980657 + MIR3 SINE MIR 26 204 -4 245 327 58 26 chr2 30276162 30276330 -222980253 - MIR SINE MIR -48 214 44 319 221 187 1 chr2 30276870 30276978 -222979605 + MIR SINE MIR 60 186 -62 278 286 79 0 chr2 30278335 30278461 -222978122 - L2 LINE L2 -213 3059 2924 203 293 0 13 chr2 30279027 30279102 -222977481 - MIR3 SINE MIR -1 207 134 215 269 62 97 chr2 30280032 30280177 -222976406 - MIR SINE MIR -58 204 65 1514 259 194 16 chr2 30280203 30281161 -222975422 - L2 LINE L2 -1 3312 2155 1784 275 193 12 chr2 30281597 30282585 -222973998 - L2 LINE L2 -1205 2109 943 634 314 32 20 chr2 30284001 30284249 -222972334 + MIR SINE MIR 9 259 -3 219 232 29 14 chr2 30284858 30284927 -222971656 + CT-rich Low_complexity Low_complexity 1 70 0 261 353 33 0 chr2 30285040 30285162 -222971421 + MIR SINE MIR 100 225 -37 2268 70 0 85 chr2 30286580 30286908 -222969675 - AluY SINE Alu -11 300 1 227 208 42 0 chr2 30287452 30287500 -222969083 - HSMAR1 DNA Mariner -1235 52 3 219 201 19 6 chr2 30288287 30288348 -222968235 + MIR SINE MIR 109 147 -61 26 0 0 0 chr2 30290001 30290027 -222966556 + AT_rich Low_complexity Low_complexity 1 26 0 2112 211 45 11 chr2 30290409 30290855 -222965728 + MLT1C LTR MaLR 7 467 0 228 316 10 0 chr2 30291906 30292004 -222964579 + (CAGAGA)n Simple_repeat Simple_repeat 3 101 0 195 312 141 54 chr2 30292209 30292507 -222964076 - L2 LINE L2 -16 3256 2933 1839 153 18 0 chr2 30292960 30293234 -222963349 + AluSx SINE Alu 1 279 -33 354 45 0 0 chr2 30293234 30293278 -222963305 + (CA)n Simple_repeat Simple_repeat 1 44 0 2423 94 5 77 chr2 30293427 30293819 -222962764 - THE1B LTR MaLR 0 364 1 295 224 156 19 chr2 30294896 30295069 -222961514 - MIR SINE MIR -11 197 5 2101 128 0 3 chr2 30295402 30295690 -222960893 + AluSx SINE Alu 1 287 -25 235 184 20 0 chr2 30295709 30295758 -222960825 - L3 LINE CR1 -73 1504 1455 495 0 0 0 chr2 30296740 30296795 -222959788 + (CA)n Simple_repeat Simple_repeat 2 56 0 496 275 37 63 chr2 30296824 30297013 -222959570 + MIR3 SINE MIR 16 199 -9 512 264 86 0 chr2 30297584 30297724 -222958859 - MIR3 SINE MIR -11 197 46 441 355 27 18 chr2 30297963 30298183 -222958400 - MIR SINE MIR -28 234 13 417 20 0 0 chr2 30298480 30298530 -222958053 + (TA)n Simple_repeat Simple_repeat 2 51 0 2330 84 0 0 chr2 30298530 30298814 -222957769 - AluSx SINE Alu -7 305 22 188 282 51 13 chr2 30298862 30298940 -222957643 - MIR SINE MIR -68 140 60 2534 109 17 3 chr2 30300824 30301183 -222955400 + THE1B LTR MaLR 1 364 0 415 314 89 0 chr2 30301899 30302068 -222954515 + MIR SINE MIR 69 252 -10 2266 94 7 0 chr2 30303208 30303507 -222953076 - AluSp SINE Alu -12 301 1 283 335 66 22 chr2 30303696 30303878 -222952705 - MIR3 SINE MIR -5 203 14 261 341 63 0 chr2 30304378 30304504 -222952079 + MIR SINE MIR 93 226 -36 810 113 0 0 chr2 30306688 30306803 -222949780 - L1PA8 LINE L1 -2 6170 6056 187 54 54 0 chr2 30306806 30306843 -222949740 + T-rich Low_complexity Low_complexity 37 75 0 6663 56 0 5 chr2 30307227 30308210 -222948373 - L1PA7 LINE L1 0 6154 5189 307 320 27 39 chr2 30308273 30308452 -222948131 - MIR SINE MIR -70 138 6 830 191 5 31 chr2 30309216 30309410 -222947173 - MER53 DNA DNA 0 189 1 281 320 10 0 chr2 30309862 30309965 -222946618 - MIR SINE MIR -72 136 33 399 21 0 0 chr2 30310316 30310364 -222946219 + (TG)n Simple_repeat Simple_repeat 2 49 0 357 324 28 21 chr2 30310372 30310514 -222946069 - MER5B DNA MER1_type -5 173 31 938 297 27 33 chr2 30310812 30311022 -222945561 - L1ME3A LINE L1 -304 5866 5656 1906 113 44 118 chr2 30311022 30311386 -222945197 + MER1B DNA MER1_type 1 337 0 938 297 27 33 chr2 30311386 30311626 -222944957 - L1ME3A LINE L1 -514 5656 5419 1528 251 33 15 chr2 30313674 30314128 -222942455 - MLT1C LTR MaLR 0 467 6 243 237 65 21 chr2 30315229 30315322 -222941261 - Charlie7 DNA MER1_type -1 2611 2515 528 279 86 10 chr2 30315833 30316217 -222940366 + L1ME4a LINE L1 5707 6119 -2 504 224 135 26 chr2 30317118 30317274 -222939309 + MIR3 SINE MIR 15 187 -21 1529 170 132 62 chr2 30317623 30318077 -222938506 + MLT1D LTR MaLR 20 505 0 310 321 27 27 chr2 30318744 30318856 -222937727 + L2 LINE L2 3151 3262 -10 180 367 46 18 chr2 30318866 30318975 -222937608 - MIR SINE MIR -141 121 10 212 271 59 12 chr2 30319386 30319471 -222937112 + MIR3 SINE MIR 81 169 -39 2314 122 0 0 chr2 30320365 30320676 -222935907 - AluSx SINE Alu -1 311 1 1926 171 7 0 chr2 30322447 30322745 -222933838 + 7SLRNA srpRNA srpRNA 1 300 -20 4718 245 44 59 chr2 30322793 30326446 -222930137 + L1ME4a LINE L1 883 4608 -2036 507 100 0 40 chr2 30326470 30326570 -222930013 + (GGGGA)n Simple_repeat Simple_repeat 2 97 0 3088 226 81 14 chr2 30326653 30327740 -222928843 + L1ME4a LINE L1 4665 5824 -820 648 213 0 8 chr2 30327745 30327872 -222928711 + FLAM_C SINE Alu 1 126 -17 268 326 22 0 chr2 30328044 30328133 -222928450 - MIR SINE MIR -116 146 56 400 251 120 87 chr2 30328405 30328680 -222927903 + L1ME4a LINE L1 6195 6478 -141 17965 27 0 0 chr2 30328680 30331595 -222924988 + L1PA3 LINE L1 3236 6155 0 30 77 0 0 chr2 30331822 30331887 -222924696 + AT_rich Low_complexity Low_complexity 1 65 0 8552 197 44 9 chr2 30331912 30334700 -222921883 + L1MA4 LINE L1 1 2982 -3346 2589 79 37 8 chr2 30334700 30335054 -222921529 + THE1B LTR MaLR 1 364 0 8552 197 44 9 chr2 30335054 30336482 -222920101 + L1MA4 LINE L1 2982 4360 -1968 2899 144 35 1 chr2 30336479 30337053 -222919530 + L1MA4 LINE L1 5728 6346 -7 * 290 267 56 11 chr2 30337067 30337157 -222919426 - MIR3 SINE MIR -102 106 13 238 355 62 47 chr2 30337165 30337376 -222919207 + L3b LINE CR1 1358 1571 -12 495 363 106 3 chr2 30337443 30337746 -222918837 + L3 LINE CR1 194 527 -1050 204 280 40 0 chr2 30338228 30338278 -222918305 - L2 LINE L2 -21 3251 3200 1814 168 47 0 chr2 30338484 30338782 -222917801 + AluJo SINE Alu 1 312 0 189 306 159 19 chr2 30338867 30339024 -222917559 + MIR SINE MIR 76 254 -8 198 368 84 25 chr2 30339067 30339306 -222917277 - L2 LINE L2 -450 2864 2612 240 191 21 0 chr2 30340309 30340356 -222916227 + GA-rich Low_complexity Low_complexity 1 48 0 349 283 55 55 chr2 30340773 30340918 -222915665 - L2 LINE L2 0 3313 3169 1928 161 3 7 chr2 30341559 30341869 -222914714 + AluSx SINE Alu 1 309 -3 473 276 153 15 chr2 30342018 30342214 -222914369 + MIR SINE MIR 3 225 -37 572 339 62 18 chr2 30342469 30342693 -222913890 + MIR SINE MIR 8 241 -21 206 248 41 50 chr2 30343046 30343167 -222913416 + CT-rich Low_complexity Low_complexity 1 120 0 330 206 0 0 chr2 30343962 30344035 -222912548 + MSTB2 LTR MaLR 385 457 0 194 330 11 0 chr2 30345416 30345504 -222911079 - MIR SINE MIR -72 136 48 311 327 116 8 chr2 30346347 30346518 -222910065 - MIR3 SINE MIR -62 146 3 860 279 34 0 chr2 30347050 30347258 -222909325 + MIR SINE MIR 43 257 -5 248 261 43 29 chr2 30347439 30347508 -222909075 - MIR3 SINE MIR -11 197 128 290 207 135 9 chr2 30347597 30347708 -222908875 - L1ME1 LINE L1 -18 6148 6024 300 261 157 17 chr2 30349486 30349601 -222906982 + MIR3 SINE MIR 14 144 -64 1879 146 14 0 chr2 30349716 30349991 -222906592 - AluSx SINE Alu -33 279 1 293 326 174 20 chr2 30350121 30350317 -222906266 - MIR SINE MIR -8 254 29 4023 193 48 8 chr2 30350506 30351336 -222905247 - MER21B LTR ERV1 0 863 1 292 234 234 0 chr2 30352070 30352164 -222904419 + MER91C DNA MER1_type 24 139 -1 964 238 31 0 chr2 30353356 30353549 -222903034 + MER21B LTR ERV1 1 199 -664 601 332 64 30 chr2 30354019 30354426 -222902157 + HAL1 LINE L1 497 917 -1590 252 148 0 0 chr2 30354502 30354524 -222902059 + (CA)n Simple_repeat Simple_repeat 1 22 -32 240 35 0 0 chr2 30354524 30354553 -222902030 + (TC)n Simple_repeat Simple_repeat 1 29 0 252 148 0 0 chr2 30354553 30354584 -222901999 + (CA)n Simple_repeat Simple_repeat 21 54 0 1546 272 13 15 chr2 30354598 30355072 -222901511 + HAL1 LINE L1 1351 1823 -684 318 269 82 8 chr2 30355081 30355094 -222901489 + HAL1 LINE L1 2364 2375 -132 2210 128 0 25 chr2 30355094 30355452 -222901131 + L1MB3 LINE L1 5835 6183 0 318 269 82 8 chr2 30355452 30355572 -222901011 + HAL1 LINE L1 2375 2507 0 183 270 0 0 chr2 30355597 30355660 -222900923 - L2 LINE L2 -299 2973 2911 379 220 58 64 chr2 30355808 30355981 -222900602 - MER113 DNA MER1_type? -306 215 44 219 69 0 0 chr2 30356714 30356743 -222899840 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 2542 286 73 17 chr2 30356751 30358143 -222898440 - L2 LINE L2 -2 3311 1838 230 211 256 33 chr2 30358169 30358259 -222898324 + MIR3 SINE MIR 97 206 -2 5695 35 3 0 chr2 30359361 30360025 -222896558 - L1PA4 LINE L1 0 6155 5490 313 159 14 43 chr2 30361598 30361667 -222894916 - MER5A DNA MER1_type -78 111 45 259 333 114 23 chr2 30361722 30361854 -222894729 + MER5A DNA MER1_type 44 187 -2 266 315 95 74 chr2 30362487 30363096 -222893487 + L2 LINE L2 2633 3268 -45 2314 133 18 83 chr2 30363096 30363554 -222893029 - MSTA LTR MaLR 0 428 1 266 315 95 74 chr2 30363554 30363601 -222892982 + L2 LINE L2 3268 3313 0 4738 197 30 45 chr2 30365854 30366048 -222890535 - L1MD1 LINE L1 -2 6240 6045 1738 126 4 4 chr2 30366048 30366295 -222890288 - AluSx SINE Alu -16 296 50 4738 197 30 45 chr2 30366295 30367721 -222888862 - L1MD1 LINE L1 -197 6045 4663 1374 221 163 38 chr2 30367767 30367835 -222888748 - MLT1D LTR MaLR 0 505 447 1702 132 43 83 chr2 30367835 30368160 -222888423 + AluSx SINE Alu 1 312 0 1374 221 163 38 chr2 30368160 30368540 -222888043 - MLT1D LTR MaLR -58 447 1 3546 214 28 34 chr2 30368540 30369507 -222887076 - L1MD1 LINE L1 -1563 4583 3623 827 92 100 0 chr2 30369527 30369647 -222886936 + AluSg/x SINE Alu 159 290 -20 230 152 0 0 chr2 30369683 30369716 -222886867 + Alu SINE Alu 88 120 -13 1748 270 69 6 chr2 30369723 30370433 -222886150 - L1MD1 LINE L1 -2510 3636 2882 702 223 106 78 chr2 30370633 30370736 -222885847 - MLT1B LTR MaLR -7 383 284 2241 103 16 53 chr2 30370736 30371114 -222885469 + THE1B LTR MaLR 1 364 0 702 223 106 78 chr2 30371114 30371293 -222885290 - MLT1B LTR MaLR -106 284 93 188 204 0 136 chr2 30372167 30372255 -222884328 - MIR SINE MIR -72 190 115 580 240 55 39 chr2 30374732 30374986 -222881597 - L1ME4a LINE L1 0 6121 5864 365 0 22 0 chr2 30375189 30375234 -222881349 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 2217 91 7 0 chr2 30375266 30375551 -222881032 + AluSx SINE Alu 3 289 -23 335 233 129 45 chr2 30376768 30376961 -222879622 - MIR SINE MIR -55 207 1 33 0 0 0 chr2 30377847 30377880 -222878703 + AT_rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr2 30378072 30378095 -222878488 + AT_rich Low_complexity Low_complexity 1 23 0 378 285 0 16 chr2 30378636 30378759 -222877824 + MIR SINE MIR 108 228 -34 1875 159 29 40 chr2 30381622 30381871 -222874712 - MLT1A2 LTR MaLR 0 374 129 2430 112 22 27 chr2 30381871 30382237 -222874346 - THE1B LTR MaLR 0 364 1 1875 159 29 40 chr2 30382237 30382365 -222874218 - MLT1A2 LTR MaLR -245 129 1 535 268 0 0 chr2 30382776 30382899 -222873684 + Tigger3(Golem) DNA MER2_type 2905 3027 -2 228 223 136 19 chr2 30383211 30383314 -222873269 + MIR SINE MIR 120 234 -28 1360 103 15 15 chr2 30383684 30383888 -222872695 - L1PA11 LINE L1 0 6174 5971 24 53 0 0 chr2 30384593 30384631 -222871952 + AT_rich Low_complexity Low_complexity 1 38 0 796 256 30 10 chr2 30384762 30384965 -222871618 + MIR SINE MIR 5 211 -51 782 256 86 15 chr2 30385026 30385350 -222871233 - L1ME4a LINE L1 -239 5882 5536 580 325 122 9 chr2 30385419 30385764 -222870819 - L2 LINE L2 -1 3271 2888 2778 74 11 0 chr2 30385867 30386218 -222870365 + THE1A LTR MaLR 1 355 0 221 322 123 20 chr2 30387665 30387811 -222868772 - MIR3 SINE MIR -19 189 29 1123 222 71 57 chr2 30387884 30388236 -222868347 + MLT1B LTR MaLR 34 390 0 21 71 0 0 chr2 30389287 30389329 -222867254 + AT_rich Low_complexity Low_complexity 1 42 0 2419 97 0 0 chr2 30389352 30389662 -222866921 - AluSg SINE Alu 0 310 1 760 143 198 33 chr2 30390591 30390857 -222865726 - MER31B LTR ERV1 0 466 33 216 266 142 9 chr2 30390873 30390986 -222865597 - MIR SINE MIR -17 245 118 3388 184 18 36 chr2 30391239 30391923 -222864660 - LTR51 LTR ERV1 0 671 1 655 274 35 13 chr2 30392850 30393076 -222863507 - MIR SINE MIR -1 261 31 826 171 0 20 chr2 30393296 30393442 -222863141 + FLAM_C SINE Alu 1 143 0 1839 198 67 25 chr2 30393442 30393876 -222862707 - MER31B LTR ERV1 -13 453 2 194 271 141 12 chr2 30394079 30394164 -222862419 - MIR SINE MIR -64 144 49 1867 151 125 13 chr2 30395517 30395902 -222860681 - MSTA LTR MaLR 0 428 1 189 278 78 0 chr2 30396020 30396110 -222860473 + MIR SINE MIR 156 252 -10 343 286 166 27 chr2 30397419 30397535 -222859048 + L3 LINE CR1 1281 1380 -197 1767 199 7 0 chr2 30397535 30397832 -222858751 + AluJo SINE Alu 1 299 -13 343 286 166 27 chr2 30397832 30397974 -222858609 + L3 LINE CR1 1380 1575 -2 1926 155 4 0 chr2 30398255 30398554 -222858029 + AluSx SINE Alu 3 302 0 230 273 0 0 chr2 30398946 30399001 -222857582 + MIR SINE MIR 46 100 -108 892 226 67 64 chr2 30399078 30399437 -222857146 - L2 LINE L2 -1 3312 2953 1506 248 101 7 chr2 30399668 30400241 -222856342 - L2 LINE L2 -1074 2240 1614 420 259 22 7 chr2 30400511 30400646 -222855937 + MER103 DNA DNA 9 145 -21 1190 175 28 14 chr2 30400716 30400933 -222855650 - MER58A DNA MER1_type 0 224 5 270 293 20 20 chr2 30401527 30401626 -222854957 + L3 LINE CR1 1265 1363 -214 1571 198 54 37 chr2 30401753 30402106 -222854477 - MLT1A2 LTR MaLR -15 359 1 1586 156 146 3 chr2 30402151 30402446 -222854137 + MER1B DNA MER1_type 1 337 0 207 203 149 27 chr2 30603880 30603954 -222652629 + MIR SINE MIR 21 103 -105 300 27 0 0 chr2 30604284 30604321 -222652262 + (TG)n Simple_repeat Simple_repeat 1 37 0 185 289 119 62 chr2 30604878 30605072 -222651511 + L2 LINE L2 3109 3313 0 280 248 73 28 chr2 30605103 30605212 -222651371 - MLT1K LTR MaLR -44 544 431 751 250 91 19 chr2 30605293 30605501 -222651082 - MLT1K LTR MaLR -364 224 2 210 245 191 0 chr2 30606085 30606179 -222650404 - MIR SINE MIR -63 145 34 10595 172 23 20 chr2 30606863 30608544 -222648039 + L1 LINE L1 2884 4575 -1571 547 115 0 0 chr2 30608544 30608622 -222647961 + MADE1 DNA Mariner 3 80 0 10595 172 23 20 chr2 30608622 30609067 -222647516 + L1 LINE L1 4575 5017 -1129 5889 29 6 0 chr2 30609167 30609852 -222646731 + L1PA4 LINE L1 5467 6155 0 6537 205 57 23 chr2 30609871 30611800 -222644783 + L1M4 LINE L1 3569 5561 -613 250 191 0 0 chr2 30612110 30612157 -222644426 + MLT1K LTR MaLR 509 555 -33 298 244 110 24 chr2 30612216 30612343 -222644240 + MER5A DNA MER1_type 1 138 -51 2422 70 6 19 chr2 30612343 30612658 -222643925 - AluSx SINE Alu 0 312 2 1198 158 0 11 chr2 30612671 30612861 -222643722 - AluJ SINE Alu -16 296 109 2219 91 3 53 chr2 30612880 30613198 -222643385 - AluSp SINE Alu -11 302 1 2121 151 34 79 chr2 30613200 30613671 -222642912 + LTR46 LTR ERV1 11 460 0 2312 77 40 0 chr2 30613675 30613973 -222642610 + AluSp SINE Alu 1 310 -3 649 193 0 0 chr2 30613983 30614092 -222642491 - AluJ SINE Alu -202 110 2 1181 134 6 0 chr2 30614521 30614692 -222641891 - AluSg/x SINE Alu -10 302 131 1411 291 110 27 chr2 30615836 30616643 -222639940 + L2 LINE L2 745 1618 -1696 1587 128 4 75 chr2 30616663 30616788 -222639795 + AluJo SINE Alu 17 115 -197 2181 98 42 0 chr2 30616788 30617075 -222639508 + AluSx SINE Alu 1 299 -13 1587 128 4 75 chr2 30617075 30617215 -222639368 + AluJo SINE Alu 115 263 -49 331 301 18 30 chr2 30617262 30617428 -222639155 - L1M4 LINE L1 -5110 1432 1269 1168 258 55 48 chr2 30617651 30618251 -222638332 - L1M4 LINE L1 -3324 2822 2219 568 111 12 0 chr2 30618254 30618335 -222638248 + AluJ/FLAM SINE Alu 5 86 -226 623 275 40 75 chr2 30619100 30619474 -222637109 + L1ME3A LINE L1 3750 4110 -2036 1116 226 104 18 chr2 30619476 30620092 -222636491 + L1ME3A LINE L1 4915 5578 -592 695 117 9 27 chr2 30620096 30620207 -222636376 - THE1B LTR MaLR 0 364 256 1628 205 28 31 chr2 30620207 30620598 -222635985 + L1ME3A LINE L1 5582 5971 -199 2671 52 3 0 chr2 30620622 30620931 -222635652 - AluSp SINE Alu -3 310 1 651 171 116 20 chr2 30621051 30621197 -222635386 - MER97c DNA MER1_type? -912 178 19 256 237 17 0 chr2 30621210 30621269 -222635314 + L1ME3A LINE L1 6103 6162 -8 2218 116 10 3 chr2 30621688 30621998 -222634585 - AluSx SINE Alu 0 312 1 299 136 0 2 chr2 30622863 30622916 -222633667 + Alu SINE Alu 254 299 -3 2195 112 3 0 chr2 30623435 30623731 -222632852 - AluSx SINE Alu -10 302 6 1729 161 50 0 chr2 30623881 30624160 -222632423 + AluSx SINE Alu 1 293 -19 1835 134 7 7 chr2 30624642 30624926 -222631657 - AluSq SINE Alu -29 284 1 2220 58 4 0 chr2 30624950 30625211 -222631372 - AluY SINE Alu -12 299 38 506 115 11 11 chr2 30625813 30625900 -222630683 + AluJb SINE Alu 158 244 -68 180 125 0 0 chr2 30625938 30625970 -222630613 + (T)n Simple_repeat Simple_repeat 1 32 0 771 155 8 8 chr2 30626171 30626300 -222630283 - FLAM_C SINE Alu -4 129 1 295 245 122 48 chr2 30626978 30627125 -222629458 + L1ME3A LINE L1 5794 5951 -219 2238 123 0 0 chr2 30627242 30627544 -222629039 + AluSx SINE Alu 1 302 -10 2407 53 0 3 chr2 30627643 30627951 -222628632 + AluY SINE Alu 1 307 0 464 258 91 21 chr2 30628448 30628634 -222627949 + HAL1 LINE L1 2309 2507 0 909 271 51 38 chr2 30628807 30629332 -222627251 + L1MC/D LINE L1 4080 4611 -1535 1342 279 86 11 chr2 30629338 30629814 -222626769 - LTR33 LTR ERVL -2 519 8 532 274 147 30 chr2 30629828 30630524 -222626059 + L1MC/D LINE L1 4795 5577 -743 241 352 8 0 chr2 30630692 30630820 -222625763 + L2 LINE L2 2127 2255 -1059 2194 101 14 0 chr2 30631180 30631468 -222625115 + AluSc SINE Alu 1 292 -17 1905 161 0 0 chr2 30631889 30632169 -222624414 - AluJb SINE Alu -32 280 1 222 245 70 0 chr2 30632783 30632853 -222623730 - MIR SINE MIR -77 131 57 478 223 0 27 chr2 30633322 30633434 -222623149 - MER81 DNA DNA -2 112 4 990 184 32 57 chr2 30634449 30634812 -222621771 - LTR48B LTR ERV1 0 644 236 1422 225 7 77 chr2 30634946 30635364 -222621219 + L1MEc LINE L1 285 673 -5723 212 0 0 35 chr2 30635677 30635706 -222620877 + (TTA)n Simple_repeat Simple_repeat 2 29 0 1752 92 0 17 chr2 30635715 30635954 -222620629 - AluSq SINE Alu -78 235 1 5108 77 5 5 chr2 30636348 30637008 -222619575 - PABL_A LTR ERV1 0 660 1 689 263 65 26 chr2 30637033 30637265 -222619318 + LTR16C LTR ERVL 85 325 -166 414 185 0 0 chr2 30637252 30637317 -222619266 + LTR8 LTR ERV1 619 683 -8 * 944 205 15 10 chr2 30637420 30637615 -222618968 + LTR16C LTR ERVL 296 491 0 256 308 26 0 chr2 30637646 30637724 -222618859 - MIR3 SINE MIR -18 190 111 3261 163 45 71 chr2 30638361 30638889 -222617694 + LTR8 LTR ERV1 16 524 -167 2289 88 0 3 chr2 30638889 30639202 -222617381 + AluSp SINE Alu 1 312 0 3261 163 45 71 chr2 30639202 30639366 -222617217 + LTR8 LTR ERV1 524 691 0 264 259 116 27 chr2 30639404 30639516 -222617067 + MIR SINE MIR 59 180 -82 710 235 93 20 chr2 30640619 30640823 -222615760 - LTR29 LTR ERV1 -263 359 141 284 203 63 119 chr2 30640799 30640880 -222615703 - MER34 LTR ERV1 -407 135 64 * 1781 153 3 62 chr2 30640880 30641200 -222615383 + AluJo SINE Alu 1 301 -11 284 203 63 119 chr2 30641200 30641261 -222615322 - MER34 LTR ERV1 -478 64 1 1418 146 8 4 chr2 30642041 30642280 -222614303 + MER50 LTR ERV1 1 240 -494 1716 162 65 40 chr2 30642295 30642833 -222613750 - MLT2A2 LTR ERVL 0 554 1 1263 104 4 124 chr2 30642834 30642954 -222613629 + MER50 LTR ERV1 460 593 -141 2308 91 0 13 chr2 30642954 30643261 -222613322 - AluSx SINE Alu -9 303 1 1263 104 4 124 chr2 30643261 30643315 -222613268 + MER50 LTR ERV1 593 596 -138 2200 110 33 0 chr2 30643315 30643614 -222612969 + AluSx SINE Alu 2 310 -2 1263 104 4 124 chr2 30643614 30643697 -222612886 + MER50 LTR ERV1 596 687 -47 1049 157 211 14 chr2 30644307 30644530 -222612053 + Tigger7 DNA MER2_type 1 267 -2220 1868 178 0 3 chr2 30644542 30644851 -222611732 + AluJo SINE Alu 1 308 -4 555 198 0 0 chr2 30644851 30644942 -222611641 + Tigger7 DNA MER2_type 2496 2586 -1 577 246 56 28 chr2 30645490 30645669 -222610914 - MER5A DNA MER1_type 0 189 6 2336 86 3 7 chr2 30645828 30646131 -222610452 - AluSp SINE Alu -10 303 2 298 309 57 52 chr2 30647172 30647576 -222609007 + L2 LINE L2 2867 3272 -41 232 243 118 35 chr2 30648201 30648345 -222608238 - L1ME4a LINE L1 0 6121 5966 624 223 76 24 chr2 30648446 30648689 -222607894 + MIR SINE MIR 12 262 0 702 277 63 12 chr2 30649058 30649311 -222607272 + LTR16A LTR ERVL 92 357 -93 435 148 17 43 chr2 30649310 30649425 -222607158 + LTR16A LTR ERVL 317 428 -22 * 288 301 81 32 chr2 30649429 30649615 -222606968 - L2 LINE L2 -252 3061 2867 9462 171 85 42 chr2 30649937 30651051 -222605532 + L1MDa LINE L1 18 1082 -5458 1783 156 0 42 chr2 30651051 30651358 -222605225 + AluJb SINE Alu 3 296 -16 9462 171 85 42 chr2 30651358 30652491 -222604092 + L1MDa LINE L1 1082 2362 -4178 2839 163 15 91 chr2 30652609 30652774 -222603809 + MER4E LTR ERV1 214 390 -389 2441 78 0 16 chr2 30652774 30653081 -222603502 + AluY SINE Alu 4 305 -6 2839 163 15 91 chr2 30653081 30653528 -222603055 + MER4E LTR ERV1 390 779 0 3956 167 74 49 chr2 30653653 30654187 -222602396 + L1MDa LINE L1 1470 1989 -4551 1731 166 11 14 chr2 30654187 30654470 -222602113 - AluJo SINE Alu -30 282 1 3956 167 74 49 chr2 30654470 30655026 -222601557 + L1MDa LINE L1 1989 2587 -3953 424 193 66 13 chr2 30655023 30655175 -222601408 + L1MA7 LINE L1 6003 6260 -31 * 770 158 0 43 chr2 30655237 30655376 -222601207 + FLAM_C SINE Alu 1 133 0 21 0 0 0 chr2 30655376 30655397 -222601186 + AT_rich Low_complexity Low_complexity 1 21 0 1289 199 122 16 chr2 30655476 30655787 -222600796 + MER2 DNA MER2_type 2 345 0 1960 233 18 0 chr2 30655792 30656290 -222600293 + L1MDa LINE L1 2695 3201 -3339 1233 165 0 75 chr2 30656317 30656572 -222600011 - MER46A DNA MER2_type 0 236 1 235 191 0 0 chr2 30656621 30656663 -222599920 + LTR50 LTR ERVL 1 42 -753 2370 89 10 10 chr2 30656664 30656977 -222599606 - AluSq SINE Alu 0 313 1 24 0 0 0 chr2 30659007 30659031 -222597552 + AT_rich Low_complexity Low_complexity 1 24 0 733 134 21 260 chr2 30659352 30659679 -222596904 + L1MC3 LINE L1 6683 6877 -930 1356 184 37 61 chr2 30659679 30659973 -222596610 + AluJo SINE Alu 1 287 -25 733 134 21 260 chr2 30659973 30660011 -222596572 + L1MC3 LINE L1 6877 6922 -885 463 255 65 61 chr2 30661326 30661557 -222595026 + HAL1 LINE L1 2252 2483 -24 219 253 13 0 chr2 30661581 30661656 -222594927 + A-rich Low_complexity Low_complexity 1 76 0 293 243 22 88 chr2 30661661 30661797 -222594786 - MIR3 SINE MIR 0 208 82 337 250 19 46 chr2 30662076 30662184 -222594399 + MIR SINE MIR 45 149 -113 2185 109 33 10 chr2 30662197 30662500 -222594083 + AluSg SINE Alu 1 310 0 779 114 0 100 chr2 30662520 30662660 -222593923 + FLAM_C SINE Alu 1 126 -7 198 0 0 0 chr2 30662660 30662682 -222593901 + (TA)n Simple_repeat Simple_repeat 2 23 0 361 287 9 0 chr2 30662686 30662801 -222593782 + MIR SINE MIR 137 252 -10 433 273 7 7 chr2 30663390 30663533 -222593050 + L1ME LINE L1 1025 1167 -5038 2291 202 55 36 chr2 30663618 30663668 -222592915 + L1MC4a LINE L1 7214 7262 -546 2346 139 39 42 chr2 30663668 30664100 -222592483 + MSTB1 LTR MaLR 1 431 -1 2291 202 55 36 chr2 30664100 30664632 -222591951 + L1MC4a LINE L1 7262 7807 -1 199 234 0 21 chr2 30664642 30664689 -222591894 + MIR SINE MIR 204 249 -13 525 202 9 26 chr2 30664902 30665016 -222591567 + MLT1H LTR MaLR 61 172 -377 560 270 103 33 chr2 30665016 30665383 -222591200 + L1ME LINE L1 1428 1820 -4576 304 284 65 40 chr2 30665599 30665800 -222590783 + L1ME LINE L1 2111 2316 -4080 536 298 102 43 chr2 30665820 30666667 -222589916 + L1ME LINE L1 4950 5863 -376 208 281 0 0 chr2 30666668 30666725 -222589858 - MIR SINE MIR 0 262 206 2253 102 0 10 chr2 30666730 30667033 -222589550 - AluSg1 SINE Alu -9 300 1 1879 86 4 4 chr2 30667137 30667381 -222589202 + AluSp SINE Alu 62 305 -8 316 211 234 31 chr2 30668284 30668412 -222588171 - L1MA10 LINE L1 -7 6327 6174 195 271 93 19 chr2 30668712 30668819 -222587764 - MIR SINE MIR 0 262 148 247 226 0 16 chr2 30668914 30668976 -222587607 + MER91 DNA MER1_type 1 61 -79 942 256 83 44 chr2 30669620 30669980 -222586603 + MLT1A2 LTR MaLR 1 374 0 2176 134 95 42 chr2 30670168 30670600 -222585983 - MSTB2 LTR MaLR -2 455 1 5677 149 4 22 chr2 30670800 30672637 -222583946 + L1PB1 LINE L1 4167 5965 -186 2025 146 0 19 chr2 30672677 30672992 -222583591 + AluJo SINE Alu 1 309 -3 21 0 0 0 chr2 30672992 30673013 -222583570 + AT_rich Low_complexity Low_complexity 1 21 0 180 360 129 21 chr2 30673029 30673215 -222583368 + L2 LINE L2 2771 2976 -338 775 162 28 0 chr2 30673245 30673387 -222583196 - L1MB1 LINE L1 0 6168 6023 2394 155 23 5 chr2 30673508 30673902 -222582681 - MER57A LTR ERV1 0 403 3 331 323 31 15 chr2 30673908 30674038 -222582545 + L2 LINE L2 3137 3268 -4 1179 237 93 64 chr2 30674457 30674845 -222581738 - MLT1I LTR MaLR -1 408 10 3508 143 31 31 chr2 30675471 30676046 -222580537 + Tigger4(Zombi) DNA MER2_type 1 575 -2156 3862 101 38 11 chr2 30676048 30676621 -222579962 + Tigger4(Zombi) DNA MER2_type 2143 2731 0 258 256 39 0 chr2 30676621 30676699 -222579884 - MLT1L LTR MaLR -330 285 205 2441 73 10 0 chr2 30677039 30677342 -222579241 - AluSq SINE Alu -7 306 1 373 347 40 32 chr2 30677399 30677697 -222578886 + L2 LINE L2 2764 3059 -213 282 120 0 9 chr2 30677708 30677758 -222578825 - MLT1I LTR MaLR -12 438 345 664 260 124 34 chr2 30677760 30678025 -222578558 - MLT1I LTR MaLR -23 386 98 383 305 85 34 chr2 30678189 30678425 -222578158 - MIR SINE MIR -13 249 2 233 305 59 51 chr2 30678562 30678680 -222577903 + L2 LINE L2 2966 3084 -188 425 291 178 32 chr2 30678942 30679544 -222577039 - L2 LINE L2 -96 3217 2535 578 236 199 22 chr2 30679555 30679754 -222576829 - L2 LINE L2 -961 2353 2092 1532 75 150 13 chr2 30679754 30679981 -222576602 + AluY SINE Alu 41 298 -13 578 236 199 22 chr2 30679981 30680052 -222576531 - L2 LINE L2 -1222 2092 2035 441 125 25 0 chr2 30680481 30680561 -222576022 + MER5A DNA MER1_type 108 189 0 235 333 23 0 chr2 30681127 30681214 -222575369 + MIR SINE MIR 56 144 -64 338 152 40 111 chr2 30681222 30681265 -222575318 - MER5A DNA MER1_type 0 189 145 424 279 0 0 chr2 30681265 30681376 -222575207 + MER81 DNA DNA 4 114 0 338 152 40 111 chr2 30681376 30681431 -222575152 - MER5A DNA MER1_type -44 145 98 319 245 46 97 chr2 30681507 30681600 -222574983 + MER5A DNA MER1_type 3 82 -107 2380 57 3 7 chr2 30681600 30681900 -222574683 - AluY SINE Alu -12 299 1 319 245 46 97 chr2 30681900 30682002 -222574581 + MER5A DNA MER1_type 82 188 -1 208 268 36 0 chr2 30683317 30683373 -222573210 + GA-rich Low_complexity Low_complexity 6 63 0 321 251 13 77 chr2 30685091 30685254 -222571329 + MIR SINE MIR 18 173 -68 2221 89 0 4 chr2 30685421 30685702 -222570881 + AluSq SINE Alu 1 280 -33 464 120 0 11 chr2 30685726 30685818 -222570765 + (GGAA)n Simple_repeat Simple_repeat 2 92 0 688 157 37 30 chr2 30687204 30687327 -222569256 + BC200 scRNA scRNA 2 128 -72 2216 111 25 6 chr2 30687327 30687686 -222568897 + L1MA2 LINE L1 5939 6304 0 1882 156 0 30 chr2 30687762 30688063 -222568520 + AluJb SINE Alu 3 294 -18 211 167 0 0 chr2 30688225 30688261 -222568322 - MIR SINE MIR -170 92 57 1883 172 3 3 chr2 30689112 30689409 -222567174 + AluJb SINE Alu 1 297 -15 641 299 50 55 chr2 30689738 30690102 -222566481 - L2 LINE L2 -2 3270 2909 1681 153 0 11 chr2 30690301 30690576 -222566007 - AluJo SINE Alu -20 292 21 2173 123 0 3 chr2 30690743 30691043 -222565540 + AluSx SINE Alu 1 299 -13 763 197 11 49 chr2 30691245 30691428 -222565155 + L1ME1 LINE L1 5863 6038 -128 441 209 45 21 chr2 30691506 30691632 -222564951 + L1ME1 LINE L1 6052 6183 -1 2243 105 7 0 chr2 30692318 30692622 -222563961 + AluSx SINE Alu 1 306 -6 291 256 8 72 chr2 30692974 30693099 -222563484 - MIR SINE MIR -42 220 104 1674 164 63 7 chr2 30693109 30693395 -222563188 - AluJb SINE Alu -10 302 1 323 267 52 26 chr2 30694207 30694323 -222562260 + L1MEd LINE L1 59 177 -5942 317 268 106 39 chr2 30694542 30694721 -222561862 - MIR SINE MIR -44 218 28 22 42 0 0 chr2 30695093 30695117 -222561466 + AT_rich Low_complexity Low_complexity 1 24 0 697 134 9 7 chr2 30695117 30695350 -222561233 + AluJ SINE Alu 1 297 -15 241 209 163 7 chr2 30695512 30695665 -222560918 + L1MEd LINE L1 651 827 -5292 * 1752 233 29 57 chr2 30695655 30695962 -222560621 + L1ME2 LINE L1 5647 5935 -229 2240 96 3 0 chr2 30695962 30696275 -222560308 + AluSx SINE Alu 1 314 0 1752 233 29 57 chr2 30696275 30696490 -222560093 + L1ME2 LINE L1 5935 6155 -9 2204 100 20 3 chr2 30697558 30697857 -222558726 + AluSx SINE Alu 1 304 -8 1693 150 22 29 chr2 30697860 30698174 -222558409 - L1MA7 LINE L1 -130 6161 5850 357 111 0 0 chr2 30698174 30698234 -222558349 + L1MA7 LINE L1 6229 6291 0 2026 212 146 38 chr2 30698938 30699172 -222557411 + LTR50 LTR ERVL 52 259 -536 2245 110 7 0 chr2 30699172 30699464 -222557119 - AluSg SINE Alu -16 294 1 2026 212 146 38 chr2 30699464 30699785 -222556798 + LTR50 LTR ERVL 259 685 -110 198 0 0 0 chr2 30699785 30699807 -222556776 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 2026 212 146 38 chr2 30699807 30699882 -222556701 + LTR50 LTR ERVL 685 751 -44 2216 55 136 7 chr2 30699882 30700217 -222556366 + L1PA5 LINE L1 5795 6169 0 286 213 53 107 chr2 30700218 30700283 -222556300 - L1M4 LINE L1 -1628 4518 4451 1958 136 45 45 chr2 30700283 30700615 -222555968 + MER1B DNA MER1_type 5 336 -1 286 213 53 107 chr2 30700615 30700699 -222555884 - L1M4 LINE L1 -1695 4451 4377 1610 190 68 61 chr2 30700709 30700808 -222555775 + L1M4 LINE L1 4520 4617 -1529 1989 129 0 20 chr2 30700808 30701110 -222555473 + AluJb SINE Alu 9 304 -8 1610 190 68 61 chr2 30701110 30701468 -222555115 + L1M4 LINE L1 4617 4980 -1166 2355 78 0 7 chr2 30701936 30702232 -222554351 + AluY SINE Alu 1 294 -17 384 355 87 35 chr2 30702278 30702622 -222553961 - L2 LINE L2 -13 3259 2898 1449 101 40 0 chr2 30702787 30702986 -222553597 + AluSp SINE Alu 105 311 -2 333 0 0 0 chr2 30703288 30703325 -222553258 + (TC)n Simple_repeat Simple_repeat 2 38 0 438 298 11 58 chr2 30703601 30703792 -222552791 + MER5A DNA MER1_type 2 183 -6 228 174 0 0 chr2 30704571 30704617 -222551966 - MIR SINE MIR -59 149 104 225 0 0 0 chr2 30704869 30704894 -222551689 + (A)n Simple_repeat Simple_repeat 1 25 0 1585 212 129 78 chr2 30704918 30705493 -222551090 - MER45C DNA AcHobo -349 604 1 732 142 128 0 chr2 30706092 30706233 -222550350 - L1MC1 LINE L1 -239 6094 5936 323 155 119 0 chr2 30706324 30706408 -222550175 + MIR SINE MIR 77 170 -92 438 122 0 37 chr2 30707364 30707446 -222549137 - L1MC1 LINE L1 -430 5903 5825 513 127 0 0 chr2 30707450 30707529 -222549054 - AluS SINE Alu -12 300 222 3151 123 34 23 chr2 30707529 30708084 -222548499 - LTR9B LTR ERV1 0 644 27 2449 59 3 13 chr2 30708084 30708387 -222548196 - AluY SINE Alu -11 300 1 3151 123 34 23 chr2 30708387 30708415 -222548168 - LTR9B LTR ERV1 -617 27 1 1399 139 0 10 chr2 30708421 30708629 -222547954 - AluSx SINE Alu -106 206 1 1498 212 130 39 chr2 30708673 30709159 -222547424 - LTR10B LTR ERV1 -5 542 13 1030 134 34 6 chr2 30709161 30709347 -222547236 - L1MA2 LINE L1 -473 5831 5632 231 304 63 13 chr2 30709605 30709684 -222546899 + L2 LINE L2 3138 3220 -52 214 256 77 13 chr2 30709904 30709982 -222546601 - MIR3 SINE MIR -113 95 13 2393 103 30 81 chr2 30710006 30710403 -222546180 - MER51B LTR ERV1 0 377 1 405 329 60 0 chr2 30710646 30710795 -222545788 - MIR SINE MIR -48 214 57 1583 192 12 35 chr2 30710829 30711183 -222545400 - MLT1C LTR MaLR -42 584 81 362 255 21 0 chr2 30711433 30711527 -222545056 - MLT1C LTR MaLR -371 96 1 268 287 78 23 chr2 30711670 30711799 -222544784 + MIR3 SINE MIR 50 185 -23 262 316 30 60 chr2 30712479 30712647 -222543936 - L1MC4a LINE L1 -1880 5928 5766 289 279 22 109 chr2 30713272 30713319 -222543264 - L1ME3A LINE L1 0 6170 6120 1952 186 9 0 chr2 30713319 30713664 -222542919 - MER7A DNA MER2_type 0 346 1 289 279 22 109 chr2 30713664 30713845 -222542738 - L1ME3A LINE L1 -50 6120 5962 234 0 0 0 chr2 30713903 30713929 -222542654 + (TA)n Simple_repeat Simple_repeat 1 26 0 2371 175 54 36 chr2 30714275 30714878 -222541705 - L1ME3A LINE L1 -364 5802 5189 2238 82 7 0 chr2 30714909 30715188 -222541395 - AluSq SINE Alu -32 281 1 1018 180 136 22 chr2 30715188 30715416 -222541167 - MLT1D LTR MaLR -52 453 200 4420 127 31 64 chr2 30715445 30715493 -222541090 - L1MB2 LINE L1 0 6171 6123 1519 156 7 81 chr2 30715493 30715801 -222540782 + AluJo SINE Alu 7 291 -21 4420 127 31 64 chr2 30715801 30715893 -222540690 - L1MB2 LINE L1 -48 6123 6029 2827 135 9 2 chr2 30715893 30716324 -222540259 + MER57B LTR ERV1 1 434 0 4420 127 31 64 chr2 30716324 30716993 -222539590 - L1MB2 LINE L1 -142 6029 5388 687 165 60 189 chr2 30716998 30717246 -222539337 - MLT1D LTR MaLR -289 216 1 2026 124 0 0 chr2 30717289 30717563 -222539020 + AluY SINE Alu 1 274 -37 195 42 0 0 chr2 30717567 30717591 -222538992 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 1663 193 42 20 chr2 30717792 30718149 -222538434 + MLT1A1 LTR MaLR 1 365 0 357 43 0 0 chr2 30718214 30718261 -222538322 + (CA)n Simple_repeat Simple_repeat 2 48 0 868 144 0 8 chr2 30719122 30719254 -222537329 + FLAM_C SINE Alu 1 131 -12 341 292 36 18 chr2 30719463 30719631 -222536952 + L1ME1 LINE L1 3805 3975 -2171 2482 80 0 6 chr2 30719710 30720021 -222536562 + AluSc SINE Alu 1 309 0 235 245 20 59 chr2 30720021 30720123 -222536460 + L1ME1 LINE L1 4160 4257 -1889 2334 111 14 72 chr2 30720203 30720617 -222535966 - MLT1B LTR MaLR 0 390 1 268 283 17 92 chr2 30720689 30720862 -222535721 + L1ME1 LINE L1 4460 4619 -1527 639 169 52 1 chr2 30721247 30721387 -222535196 + MIR SINE MIR 75 219 -43 22 35 0 0 chr2 30721391 30721420 -222535163 + AT_rich Low_complexity Low_complexity 1 29 0 330 273 32 111 chr2 30721525 30721637 -222534946 + L1ME1 LINE L1 5681 5764 -357 2213 113 0 0 chr2 30721637 30721929 -222534654 + AluSx SINE Alu 1 292 -20 330 273 32 111 chr2 30721929 30722069 -222534514 + L1ME1 LINE L1 5764 5913 -208 2407 77 3 0 chr2 30722262 30722560 -222534023 + AluSg SINE Alu 1 299 -11 31 44 0 0 chr2 30724103 30724148 -222532435 + GC_rich Low_complexity Low_complexity 1 45 0 26 30 0 0 chr2 30724281 30724314 -222532269 + GC_rich Low_complexity Low_complexity 1 33 0 200 91 0 30 chr2 30724647 30724680 -222531903 + (CCG)n Simple_repeat Simple_repeat 2 33 0 485 211 149 40 chr2 30727087 30727299 -222529284 - MIR SINE MIR -7 255 24 1087 218 109 14 chr2 30727584 30727869 -222528714 - MER58B DNA MER1_type -8 333 22 663 262 26 19 chr2 30728725 30728972 -222527611 + L1ME1 LINE L1 5927 6161 -5 210 316 105 0 chr2 30729486 30729600 -222526983 + MIR SINE MIR 129 254 -8 2427 74 6 10 chr2 30729690 30730002 -222526581 - AluY SINE Alu 0 311 1 1095 179 262 3 chr2 30730025 30730315 -222526268 - MLT1A1 LTR MaLR 0 365 1 416 281 130 44 chr2 30731138 30731408 -222525175 - MER102b DNA MER1_type 0 341 49 2330 105 0 0 chr2 30731544 30731839 -222524744 - AluSx SINE Alu -17 295 1 198 264 127 36 chr2 30732739 30732849 -222523734 + MIR SINE MIR 74 193 -69 2368 92 0 0 chr2 30733803 30734097 -222522486 + AluSg SINE Alu 1 294 -16 814 216 43 0 chr2 30734652 30734814 -222521769 + MER58A DNA MER1_type 42 210 -14 22 0 0 0 chr2 30737663 30737685 -222518898 + AT_rich Low_complexity Low_complexity 1 22 0 225 253 84 53 chr2 30738584 30738679 -222517904 - MER5A DNA MER1_type -22 167 70 207 88 0 0 chr2 30738682 30738716 -222517867 + (T)n Simple_repeat Simple_repeat 1 34 0 914 223 116 37 chr2 30738744 30738986 -222517597 + MER21B LTR ERV1 3 263 -600 5039 170 51 11 chr2 30739029 30739971 -222516612 + MER4B-int LTR ERV1 3079 4058 -2700 2299 107 0 3 chr2 30740226 30740534 -222516049 + AluSg SINE Alu 1 307 -3 262 200 43 29 chr2 30740545 30740615 -222515968 + MIR SINE MIR 73 143 -65 26 30 0 0 chr2 30741874 30741907 -222514676 + AT_rich Low_complexity Low_complexity 1 33 0 329 257 76 0 chr2 30743323 30743428 -222513155 - MIR3 SINE MIR -48 160 48 926 221 14 5 chr2 30743510 30743732 -222512851 + MIR SINE MIR 9 232 -30 193 277 62 62 chr2 30744014 30744031 -222512552 - MIR SINE MIR -50 212 196 827 204 44 0 chr2 30744031 30744212 -222512371 - MER5A DNA MER1_type 0 189 1 193 277 62 62 chr2 30744212 30744324 -222512259 - MIR SINE MIR -65 197 83 732 199 24 6 chr2 30745031 30745197 -222511386 + MER5B DNA MER1_type 10 178 0 374 143 13 0 chr2 30745233 30745310 -222511273 + (TGGA)n Simple_repeat Simple_repeat 1 78 0 312 367 38 9 chr2 30745417 30745627 -222510956 - L2 LINE L2 -463 2851 2636 238 206 0 48 chr2 30745770 30745833 -222510750 - MIR3 SINE MIR -135 73 14 843 134 0 22 chr2 30746055 30746189 -222510394 - FLAM_C SINE Alu -2 131 1 891 100 0 50 chr2 30746548 30746721 -222509862 - FLAM_C SINE Alu 0 166 1 205 281 288 13 chr2 30746890 30747043 -222509540 + MER91A DNA MER1_type 1 195 -1 476 239 35 1 chr2 30747085 30747216 -222509367 + MIR SINE MIR 4 137 -71 439 244 65 75 chr2 30747290 30747360 -222509223 + MIR SINE MIR 49 118 -144 2330 95 0 19 chr2 30747360 30747675 -222508908 - AluSc SINE Alu 0 309 1 439 244 65 75 chr2 30747675 30747805 -222508778 + MIR SINE MIR 118 247 -15 885 190 76 0 chr2 30747899 30747989 -222508594 + MLT1F LTR MaLR 345 427 -115 1857 169 54 23 chr2 30747989 30748343 -222508240 - MLT1A1 LTR MaLR 0 365 1 885 190 76 0 chr2 30748343 30748436 -222508147 + MLT1F LTR MaLR 427 542 0 2362 63 20 13 chr2 30748456 30748759 -222507824 + AluY SINE Alu 1 305 -6 205 136 68 23 chr2 30750268 30750312 -222506271 + L2 LINE L2 3265 3310 -3 250 250 0 0 chr2 30750383 30750443 -222506140 - L2 LINE L2 -4 3309 3250 1943 166 3 3 chr2 30750810 30751117 -222505466 - AluJb SINE Alu -5 307 1 767 224 13 0 chr2 30751801 30751953 -222504630 + MER45A DNA AcHobo 24 177 -1 397 256 29 39 chr2 30751953 30752133 -222504450 - MIR SINE MIR -63 145 12 23 54 0 0 chr2 30752433 30752470 -222504113 + AT_rich Low_complexity Low_complexity 1 37 0 359 274 212 6 chr2 30752807 30753000 -222503583 + MIR SINE MIR 31 261 -1 740 241 7 0 chr2 30753170 30753315 -222503268 + MER63A DNA MER1_type 53 198 -12 405 305 36 45 chr2 30753337 30753573 -222503010 + MIR SINE MIR 30 259 -3 2333 107 0 3 chr2 30753714 30754023 -222502560 - AluSg SINE Alu 0 310 3 602 250 100 5 chr2 30754401 30754601 -222501982 + MIR SINE MIR 36 254 -8 359 151 125 21 chr2 30755293 30755395 -222501188 + L1MC/D LINE L1 5717 5827 -304 2018 175 31 6 chr2 30756267 30756622 -222499961 - MLT1A1 LTR MaLR -1 364 1 1506 244 141 32 chr2 30756973 30757505 -222499078 - MLT1G3 LTR MaLR 0 590 1 291 289 10 10 chr2 30757988 30758092 -222498491 + MIR SINE MIR 101 204 -58 1183 150 10 25 chr2 30758423 30758606 -222497977 - AluSg/x SINE Alu -11 301 120 1502 114 0 10 chr2 30758606 30758808 -222497775 - AluSx SINE Alu -112 200 1 1183 150 10 25 chr2 30758808 30758824 -222497759 - AluSg/x SINE Alu -192 120 105 2276 81 7 7 chr2 30759238 30759557 -222497026 - AluSp SINE Alu 0 319 1 5913 218 40 29 chr2 30759849 30761602 -222494981 + L1MD1 LINE L1 2117 4385 -1761 2283 104 0 7 chr2 30761602 30761900 -222494683 + AluSx SINE Alu 1 296 -16 5913 218 40 29 chr2 30761900 30762055 -222494528 + L1MD1 LINE L1 4385 4537 -1609 1086 196 18 9 chr2 30762060 30762284 -222494299 + L1MD1 LINE L1 5603 5828 -414 963 128 13 13 chr2 30762284 30762421 -222494162 + AluSg/x SINE Alu 145 284 -28 961 101 0 13 chr2 30762421 30762580 -222494003 + (GGAA)n Simple_repeat Simple_repeat 3 159 0 963 128 13 13 chr2 30762580 30762591 -222493992 + AluSg/x SINE Alu 283 293 -19 1472 163 70 20 chr2 30762591 30762891 -222493692 + L1MD1 LINE L1 5819 6133 -109 1685 164 47 0 chr2 30763099 30763253 -222493330 - AluJb SINE Alu -24 288 114 216 0 0 0 chr2 30763253 30763277 -222493306 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1685 164 47 0 chr2 30763277 30763397 -222493186 - AluJb SINE Alu -198 114 1 397 307 132 27 chr2 30763476 30763847 -222492736 - L1MC4a LINE L1 -1898 5910 5501 701 154 0 8 chr2 30764255 30764372 -222492211 + FLAM_C SINE Alu 1 116 -17 21 36 0 0 chr2 30764372 30764400 -222492183 + AT_rich Low_complexity Low_complexity 1 28 0 532 321 9 5 chr2 30764779 30764994 -222491589 + LTR16B LTR ERVL 246 461 -3 277 263 53 0 chr2 30765125 30765201 -222491382 + MIR3 SINE MIR 99 178 -30 28 0 0 0 chr2 30765489 30765517 -222491066 + AT_rich Low_complexity Low_complexity 1 28 0 734 145 0 8 chr2 30765517 30765634 -222490949 - FLAM_C SINE Alu -17 116 1 1860 113 3 80 chr2 30765870 30766181 -222490402 + AluSx SINE Alu 2 288 -24 33 66 0 0 chr2 30766329 30766390 -222490193 + AT_rich Low_complexity Low_complexity 1 61 0 556 282 194 41 chr2 30766477 30767363 -222489220 + L2 LINE L2 2283 3312 -1 1994 130 40 13 chr2 30767384 30767684 -222488899 - AluJb SINE Alu -4 308 1 495 299 69 15 chr2 30767728 30767989 -222488594 - L1MC4a LINE L1 -1921 5887 5613 2557 64 0 0 chr2 30768211 30768508 -222488075 + AluY SINE Alu 1 297 -14 626 291 25 45 chr2 30768534 30768625 -222487958 + MIR SINE MIR 3 94 -168 3142 132 43 61 chr2 30768625 30769247 -222487336 - LTR36 LTR ERV1 0 611 1 626 291 25 45 chr2 30769247 30769399 -222487184 + MIR SINE MIR 94 241 -21 279 269 21 43 chr2 30771202 30771295 -222485288 + MLT1K LTR MaLR 477 567 -21 682 152 9 0 chr2 30771813 30771918 -222484665 - Tigger7 DNA MER2_type 0 2487 2382 703 142 49 195 chr2 30771919 30772124 -222484459 - Tigger7 DNA MER2_type -499 234 60 1351 164 102 58 chr2 30773058 30773122 -222483461 - MLT1D LTR MaLR 0 505 445 2301 100 3 0 chr2 30773122 30773423 -222483160 - AluSx SINE Alu -10 302 1 1351 164 102 58 chr2 30773423 30773651 -222482932 - MLT1D LTR MaLR -60 445 200 3209 123 21 34 chr2 30773680 30773728 -222482855 - L1MB2 LINE L1 0 6171 6124 1597 163 3 75 chr2 30773728 30774035 -222482548 + AluJo SINE Alu 7 291 -21 3209 123 21 34 chr2 30774035 30774127 -222482456 - L1MB2 LINE L1 -47 6124 6032 2827 135 9 2 chr2 30774127 30774558 -222482025 + MER57B LTR ERV1 1 434 0 3209 123 21 34 chr2 30774558 30774951 -222481632 - L1MB2 LINE L1 -139 6032 5644 253 274 44 53 chr2 30775540 30775606 -222480977 + MIR3 SINE MIR 86 152 -56 2225 129 0 3 chr2 30775606 30775908 -222480675 + AluSx SINE Alu 1 301 -11 253 274 44 53 chr2 30775908 30775954 -222480629 + MIR3 SINE MIR 152 197 -11 627 152 38 0 chr2 30776336 30776441 -222480142 + MLT1D LTR MaLR 345 453 -52 * 861 187 20 0 chr2 30776419 30776569 -222480014 - MLT1A1 LTR MaLR -28 337 185 564 243 102 69 chr2 30776845 30776909 -222479674 - L1MC5 LINE L1 -86 7875 7815 1683 170 2 88 chr2 30776909 30777308 -222479275 + MLT1A1 LTR MaLR 1 365 0 564 243 102 69 chr2 30777308 30777647 -222478936 - L1MC5 LINE L1 -146 7815 7459 1728 274 106 12 chr2 30777806 30778371 -222478212 - MLT2F LTR ERVL 0 663 46 2194 132 0 3 chr2 30778747 30779051 -222477532 - AluSg SINE Alu -7 303 1 205 209 23 105 chr2 30779156 30779242 -222477341 - MIR SINE MIR 0 262 184 847 199 144 34 chr2 30779461 30779697 -222476886 + MLT1H LTR MaLR 78 339 -210 995 226 78 68 chr2 30780026 30780512 -222476071 - L1ME4a LINE L1 -38 6083 5593 2285 125 0 3 chr2 30781427 30781738 -222474845 + AluSx SINE Alu 1 310 -2 290 346 46 0 chr2 30781866 30782019 -222474564 + MIR SINE MIR 73 232 -30 1962 153 20 3 chr2 30783514 30783809 -222472774 - AluSx SINE Alu -12 300 1 390 302 0 9 chr2 30784013 30784119 -222472464 - MER5B DNA MER1_type -72 106 2 366 302 69 0 chr2 30784179 30784295 -222472288 - L2 LINE L2 -8 3264 3141 1982 138 0 0 chr2 30784759 30785098 -222471485 - AluSx SINE Alu 0 345 7 328 232 14 0 chr2 30785527 30785596 -222470987 - MLT1L LTR MaLR -374 241 172 789 163 77 77 chr2 30785614 30785694 -222470889 + MER106A DNA MER1_type 1 80 -156 2090 134 0 3 chr2 30785694 30785985 -222470598 + AluSx SINE Alu 2 291 -21 789 163 77 77 chr2 30785985 30786113 -222470470 + MER106A DNA MER1_type 79 209 -27 204 277 277 0 chr2 30786625 30786719 -222469864 + L2 LINE L2 3139 3258 -14 234 62 0 0 chr2 30786725 30786757 -222469826 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 223 309 12 12 chr2 30786760 30786844 -222469739 + MIR SINE MIR 23 108 -100 1468 179 65 17 chr2 30787203 30787372 -222469211 - AluJo SINE Alu -8 304 114 198 0 0 0 chr2 30787372 30787394 -222469189 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 1468 179 65 17 chr2 30787394 30787514 -222469069 - AluJo SINE Alu -198 114 1 22 35 0 0 chr2 30788123 30788152 -222468431 + AT_rich Low_complexity Low_complexity 1 29 0 2659 51 0 6 chr2 30788170 30788482 -222468101 - AluY SINE Alu -1 310 1 852 163 0 15 chr2 30788694 30788829 -222467754 + FLAM_C SINE Alu 1 133 0 330 67 0 0 chr2 30788857 30788902 -222467681 + (CA)n Simple_repeat Simple_repeat 2 46 0 619 250 12 17 chr2 30788912 30789084 -222467499 - MER5B DNA MER1_type -7 171 1 293 274 22 97 chr2 30789676 30789723 -222466860 - L1ME3A LINE L1 0 6170 6121 2030 177 9 0 chr2 30789723 30790068 -222466515 - MER7A DNA MER2_type 0 346 1 293 274 22 97 chr2 30790068 30790246 -222466337 - L1ME3A LINE L1 -49 6121 5962 237 83 0 0 chr2 30790304 30790340 -222466243 + (TA)n Simple_repeat Simple_repeat 1 36 0 280 253 76 0 chr2 30790370 30790449 -222466134 - L1ME3A LINE L1 -665 5499 5415 276 280 42 56 chr2 30790458 30790601 -222465982 - MIR3 SINE MIR -4 204 64 207 246 116 0 chr2 30790755 30790824 -222465759 + MIR SINE MIR 27 103 -159 1048 154 53 14 chr2 30790824 30791032 -222465551 + MLT2C2 LTR ERVL 1 216 -248 2506 108 24 16 chr2 30791494 30791866 -222464717 + THE1C LTR MaLR 1 375 0 299 318 8 8 chr2 30792191 30792317 -222464266 - MIR3 SINE MIR -30 178 53 1104 188 122 41 chr2 30792762 30793136 -222463447 - LTR37A LTR ERV1 0 426 17 2202 81 7 45 chr2 30793136 30793444 -222463139 - AluSx SINE Alu -16 296 1 1104 188 122 41 chr2 30793444 30793463 -222463120 - LTR37A LTR ERV1 -409 17 1 2126 124 0 0 chr2 30794914 30795232 -222461351 + AluSx SINE Alu 1 318 0 582 94 12 0 chr2 30795232 30795317 -222461266 + L1MC2 LINE L1 6110 6195 -149 2560 110 3 43 chr2 30796024 30796092 -222460491 - THE1C LTR MaLR 0 375 306 2437 71 0 0 chr2 30796092 30796387 -222460196 - AluY SINE Alu -16 295 1 2560 110 3 43 chr2 30796387 30796709 -222459874 - THE1C LTR MaLR -69 306 1 579 103 23 0 chr2 30796937 30797024 -222459559 + MER3 DNA MER1_type 21 109 -100 993 199 0 6 chr2 30797024 30797200 -222459383 + AluJb SINE Alu 130 304 -8 42 48 0 0 chr2 30797239 30797302 -222459281 + AT_rich Low_complexity Low_complexity 1 63 0 240 324 33 19 chr2 30798134 30798319 -222458264 + MIR SINE MIR 37 228 -34 3455 234 111 36 chr2 30799717 30800652 -222455931 - L1MEc LINE L1 -4104 2292 1192 2396 93 0 0 chr2 30800652 30800953 -222455630 - AluY SINE Alu -10 301 1 3455 234 111 36 chr2 30800953 30801581 -222455002 - L1MEc LINE L1 -5204 1192 612 298 325 6 0 chr2 30802989 30803155 -222453428 + HAL1 LINE L1 1373 1539 -968 857 147 0 22 chr2 30803160 30803296 -222453287 + FLAM_C SINE Alu 1 133 0 349 295 133 12 chr2 30803545 30803877 -222452706 + L1ME4a LINE L1 3198 3569 -2577 2134 155 0 0 chr2 30803882 30804192 -222452391 + AluSg SINE Alu 1 310 0 1089 82 62 0 chr2 30804481 30804627 -222451956 + AluSp SINE Alu 149 303 -10 1700 142 58 88 chr2 30804893 30804943 -222451640 + MSTB1 LTR MaLR 1 51 -381 2548 57 0 0 chr2 30804943 30805239 -222451344 - AluY SINE Alu -15 296 1 1700 142 58 88 chr2 30805239 30805633 -222450950 + MSTB1 LTR MaLR 51 432 0 1845 147 28 7 chr2 30806192 30806477 -222450106 + AluJo SINE Alu 1 291 -21 877 107 7 7 chr2 30806514 30806664 -222449919 + (GGAGA)n Simple_repeat Simple_repeat 2 151 0 254 292 56 54 chr2 30806675 30806905 -222449678 + L1ME4a LINE L1 4739 4969 -1177 216 288 138 18 chr2 30807724 30807835 -222448748 + MIR SINE MIR 29 151 -66 2045 94 73 7 chr2 30808690 30808978 -222447605 + AluSx SINE Alu 1 307 -5 231 182 61 121 chr2 30809116 30809215 -222447368 - MIR3 SINE MIR -20 188 96 1428 161 0 0 chr2 30810254 30810472 -222446111 + AluJo SINE Alu 6 223 -89 2087 135 0 7 chr2 30810811 30811114 -222445469 + AluJb SINE Alu 1 301 -11 572 271 31 10 chr2 30811796 30811988 -222444595 + L1ME4a LINE L1 5579 5774 -347 517 202 202 25 chr2 30811994 30812221 -222444362 + L1ME4a LINE L1 5825 6099 -22 2262 105 3 0 chr2 30812221 30812517 -222444066 + AluSx SINE Alu 1 297 -15 517 202 202 25 chr2 30812517 30812532 -222444051 + L1ME4a LINE L1 6099 6110 -11 283 239 158 83 chr2 30812605 30812965 -222443618 + L1ME4a LINE L1 5645 6031 -90 2238 117 0 13 chr2 30813000 30813316 -222443267 + AluSq SINE Alu 1 312 -1 25 51 0 0 chr2 30813372 30813411 -222443172 + AT_rich Low_complexity Low_complexity 1 39 0 382 301 0 23 chr2 30816219 30816352 -222440231 - MER94 DNA DNA -1 133 4 284 269 48 0 chr2 30817436 30817540 -222439043 - MIR SINE MIR -122 140 32 331 265 53 37 chr2 30818244 30818422 -222438161 - L1MC/D LINE L1 -322 5833 5702 372 240 188 19 chr2 30819685 30819839 -222436744 - MER5A DNA MER1_type 0 189 10 265 270 0 50 chr2 30819947 30820047 -222436536 - MIR SINE MIR -64 198 104 244 355 32 26 chr2 30821739 30821894 -222434689 + MIR3 SINE MIR 24 179 -29 817 322 44 6 chr2 30821978 30822320 -222434263 + LTR16A LTR ERVL 1 355 -95 2402 68 10 7 chr2 30823636 30823945 -222432638 + AluSq SINE Alu 1 310 -3 402 259 19 0 chr2 30824245 30824353 -222432230 + L2 LINE L2 3160 3269 -3 224 293 154 0 chr2 30824372 30824495 -222432088 - L2 LINE L2 -235 3037 2896 759 52 0 0 chr2 30825348 30825444 -222431139 + (TTCC)n Simple_repeat Simple_repeat 1 96 0 359 279 56 39 chr2 30827458 30827691 -222428892 - HAL1 LINE L1 0 2507 2271 1029 292 100 48 chr2 30827692 30828501 -222428082 - HAL1 LINE L1 -1639 868 18 933 130 0 0 chr2 30828802 30828933 -222427650 + FLAM_C SINE Alu 1 131 -2 557 294 27 0 chr2 30829703 30829890 -222426693 + L1M4 LINE L1 4742 4933 -1213 257 111 200 0 chr2 30830371 30830416 -222426167 - MLT1I LTR MaLR -9 400 347 692 245 19 0 chr2 30830557 30830712 -222425871 - MLT1I LTR MaLR -251 158 1 955 252 168 52 chr2 30830948 30832165 -222424418 - L1ME3A LINE L1 -217 5953 4610 626 256 70 62 chr2 30832635 30832827 -222423756 + MIR SINE MIR 3 199 -63 2272 106 0 3 chr2 30832827 30833128 -222423455 + AluSg SINE Alu 1 300 -10 626 256 70 62 chr2 30833128 30833193 -222423390 + MIR SINE MIR 199 262 0 208 284 49 25 chr2 30833413 30833494 -222423089 - L3 LINE CR1 -1 1576 1494 22028 142 63 15 chr2 30834657 30839101 -222417482 - L1 LINE L1 -2882 4683 20 310 306 8 25 chr2 30839105 30839226 -222417357 - MIR SINE MIR -111 151 33 398 280 35 14 chr2 30839538 30839681 -222416902 - MIR SINE MIR -11 251 106 1191 256 40 54 chr2 30839700 30840294 -222416289 + L1M4 LINE L1 3672 4257 -1889 2402 68 3 17 chr2 30840315 30840611 -222415972 + AluSp SINE Alu 13 304 -9 2560 44 29 3 chr2 30841038 30841353 -222415230 - L1PA7 LINE L1 -33 6121 5799 2028 119 11 4 chr2 30841407 30841721 -222414862 + AluSx SINE Alu 7 322 0 228 170 27 107 chr2 30841768 30841812 -222414771 + L1M4 LINE L1 4344 4390 -1756 2125 118 6 10 chr2 30841812 30842092 -222414491 + AluSx SINE Alu 1 281 -31 180 0 0 0 chr2 30842092 30842112 -222414471 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 2125 118 6 10 chr2 30842112 30842144 -222414439 + AluSx SINE Alu 281 312 0 228 170 27 107 chr2 30842144 30842211 -222414372 + L1M4 LINE L1 4390 4446 -1700 766 236 134 86 chr2 30842302 30842780 -222413803 - HAL1 LINE L1 -2005 502 2 658 264 26 0 chr2 30843405 30843598 -222412985 + MIR SINE MIR 63 260 -2 517 159 206 0 chr2 30843840 30843947 -222412636 + L2 LINE L2 3185 3313 0 665 217 37 16 chr2 30844292 30844481 -222412102 - MIR SINE MIR -50 212 20 29 28 0 0 chr2 30844996 30845032 -222411551 + AT_rich Low_complexity Low_complexity 1 36 0 2072 130 0 3 chr2 30845032 30845325 -222411258 - AluSx SINE Alu -20 292 1 525 111 0 0 chr2 30845345 30845417 -222411166 - tRNA-Arg-CGC tRNA tRNA -4 72 1 211 356 11 0 chr2 30846575 30846662 -222409921 + L2 LINE L2 2594 2681 -633 1335 222 116 43 chr2 30846675 30847098 -222409485 - LTR16A1 LTR ERVL -3 454 1 2382 82 0 0 chr2 30847395 30847688 -222408895 - AluY SINE Alu -18 293 1 326 256 0 50 chr2 30849065 30849186 -222407397 - MIR SINE MIR -14 248 134 643 207 69 7 chr2 30849930 30850075 -222406508 + MER5B DNA MER1_type 3 156 -22 978 230 174 17 chr2 30850174 30850535 -222406048 - MER57B LTR ERV1 0 434 17 536 294 71 6 chr2 30852559 30852729 -222403854 + MIR SINE MIR 2 182 -80 1128 223 52 25 chr2 30853434 30853797 -222402786 + L1M4 LINE L1 2796 3168 -2978 1206 235 28 10 chr2 30853800 30854089 -222402494 + L1ME1 LINE L1 5738 6031 -135 23 0 0 0 chr2 30854127 30854150 -222402433 + AT_rich Low_complexity Low_complexity 1 23 0 230 224 0 0 chr2 30854535 30854584 -222401999 + (CA)n Simple_repeat Simple_repeat 2 50 0 406 279 110 23 chr2 30855014 30855315 -222401268 + L1ME4a LINE L1 5625 5951 -170 24 32 0 0 chr2 30855363 30855394 -222401189 + AT_rich Low_complexity Low_complexity 1 31 0 878 265 175 30 chr2 30855603 30856044 -222400539 - MLT1D LTR MaLR 0 505 1 2033 142 16 0 chr2 30856059 30856362 -222400221 - AluSg SINE Alu -2 308 1 257 262 155 0 chr2 30857011 30857114 -222399469 + MER5A DNA MER1_type 71 189 0 449 319 38 6 chr2 30857671 30857831 -222398752 - L2 LINE L2 0 3313 3149 634 168 62 95 chr2 30858346 30858525 -222398058 + MLT1E2 LTR MaLR 31 203 -423 * 714 213 79 0 chr2 30858500 30858664 -222397919 + MLT1E2 LTR MaLR 450 626 0 2330 100 10 0 chr2 30858687 30858988 -222397595 - AluSx SINE Alu -8 304 1 209 184 0 0 chr2 30859104 30859142 -222397441 + L3b LINE CR1 1545 1582 -1 309 172 94 66 chr2 30859439 30859587 -222396996 - MIR SINE MIR -64 144 17 255 308 0 0 chr2 30861311 30861376 -222395207 + MIR SINE MIR 40 104 -104 198 307 166 25 chr2 30861484 30861647 -222394936 + MIR SINE MIR 23 208 -54 700 297 30 22 chr2 30861648 30861880 -222394703 + L2 LINE L2 3077 3310 -3 799 165 24 94 chr2 30861908 30862120 -222394463 - MER58A DNA MER1_type -25 199 3 307 324 70 5 chr2 30862228 30862441 -222394142 + LTR33 LTR ERVL 38 264 -257 538 250 20 26 chr2 30862459 30862611 -222393972 + LTR33 LTR ERVL 371 521 0 382 322 13 0 chr2 30862844 30862975 -222393608 + MIR SINE MIR 18 152 -65 256 115 0 33 chr2 30862982 30863043 -222393540 + (TA)n Simple_repeat Simple_repeat 1 59 0 456 72 0 0 chr2 30863957 30864026 -222392557 + (CA)n Simple_repeat Simple_repeat 2 70 0 2242 113 0 7 chr2 30864935 30865236 -222391347 - AluSx SINE Alu -13 299 1 364 350 35 0 chr2 30865241 30865384 -222391199 + MIR SINE MIR 54 201 -61 1966 148 3 3 chr2 30865575 30865866 -222390717 - AluJb SINE Alu -21 291 1 634 298 31 11 chr2 30866304 30866495 -222390088 + MIR3 SINE MIR 8 202 -6 232 296 43 52 chr2 30866484 30866599 -222389984 + MIR SINE MIR 90 203 -59 * 430 255 0 0 chr2 30866689 30866787 -222389796 + MIR SINE MIR 49 146 -62 2175 100 21 4 chr2 30866951 30867272 -222389311 - AluSq SINE Alu 0 326 1 251 320 0 27 chr2 30869380 30869455 -222387128 + L3 LINE CR1 877 949 -628 4724 179 62 80 chr2 30869597 30870499 -222386084 + Charlie1a DNA MER1_type 42 910 -1851 1730 164 27 10 chr2 30870499 30870791 -222385792 + AluJo SINE Alu 1 297 -15 4724 179 62 80 chr2 30870791 30871328 -222385255 + Charlie1a DNA MER1_type 910 1455 0 2110 135 20 0 chr2 30871362 30871659 -222384924 + AluSx SINE Alu 1 303 -9 197 314 41 87 chr2 30871663 30871835 -222384748 + L3 LINE CR1 1175 1338 -239 447 272 72 14 chr2 30871845 30872010 -222384573 - MIR SINE MIR -61 147 8 242 351 101 7 chr2 30872003 30872151 -222384432 + L3 LINE CR1 1416 1577 0 * 1136 175 112 32 chr2 30872252 30872691 -222383892 - Charlie2 DNA MER1_type -129 2733 2260 2048 134 10 13 chr2 30872694 30872999 -222383584 - AluJo SINE Alu -8 304 1 184 269 30 60 chr2 30873545 30873612 -222382971 - L3 LINE CR1 -225 1352 1288 2128 155 104 34 chr2 30873646 30874118 -222382465 - MLT1D LTR MaLR 0 505 1 2591 66 0 0 chr2 30874128 30874433 -222382150 - AluY SINE Alu -6 305 1 2478 90 3 0 chr2 30874441 30874751 -222381832 - AluSp SINE Alu -2 311 1 987 261 55 0 chr2 30874753 30874991 -222381592 - MIR SINE MIR -1 261 11 433 331 49 16 chr2 30875284 30875468 -222381115 + L2 LINE L2 2855 3044 -269 328 290 48 8 chr2 30875780 30875904 -222380679 - MIR SINE MIR -87 175 47 3119 201 41 10 chr2 30876126 30876706 -222379877 - L1M4 LINE L1 -1202 4944 4335 2198 50 36 0 chr2 30876706 30876987 -222379596 - L1PA8 LINE L1 0 6172 5882 3119 201 41 10 chr2 30876987 30877134 -222379449 - L1M4 LINE L1 -1811 4335 4194 279 301 68 25 chr2 30877423 30877586 -222378997 + L2 LINE L2 2570 2739 -575 192 233 47 0 chr2 30877918 30877961 -222378622 + L2 LINE L2 3263 3307 -6 201 121 0 0 chr2 30880463 30880496 -222376087 + (GAAAA)n Simple_repeat Simple_repeat 3 35 0 199 259 0 0 chr2 30880918 30880972 -222375611 - L2 LINE L2 -22 3250 3197 2119 106 3 32 chr2 30881441 30881752 -222374831 + AluY SINE Alu 1 302 -9 420 278 0 9 chr2 30882256 30882364 -222374219 - MIR3 SINE MIR -33 175 69 182 327 18 0 chr2 30883198 30883253 -222373330 - MIR SINE MIR -135 73 18 192 143 95 0 chr2 30883284 30883326 -222373257 - MIR SINE MIR -117 145 100 1699 75 0 5 chr2 30883989 30884203 -222372380 + AluSg/x SINE Alu 90 302 -8 25 31 0 0 chr2 30887382 30887414 -222369169 + AT_rich Low_complexity Low_complexity 1 32 0 610 295 49 31 chr2 30888300 30888524 -222368059 - MIR SINE MIR -1 261 34 554 254 0 36 chr2 30889762 30889927 -222366656 - MER112 DNA MER1_type -101 159 1 2245 139 93 15 chr2 30890876 30891272 -222365311 - MSTA LTR MaLR -1 427 1 1573 228 45 37 chr2 30891518 30892009 -222364574 + Charlie4a DNA MER1_type 7 501 -7 334 257 9 19 chr2 30892442 30892547 -222364036 + MER81 DNA DNA 2 105 -9 6325 66 12 3 chr2 30892749 30893522 -222363061 + LTR17 LTR ERV1 1 780 0 649 221 134 0 chr2 30893579 30893796 -222362787 - L1ME3 LINE L1 -5 6157 5912 198 250 0 58 chr2 30894003 30894055 -222362528 - MIR SINE MIR -111 97 49 731 231 23 8 chr2 30894208 30894383 -222362200 + MER5B DNA MER1_type 2 186 -3 441 235 183 20 chr2 30894390 30894446 -222362137 - MER5A DNA MER1_type -6 183 137 2509 55 0 45 chr2 30894446 30894758 -222361825 + AluY SINE Alu 1 298 -13 441 235 183 20 chr2 30894758 30894854 -222361729 - MER5A DNA MER1_type -52 137 6 2163 215 38 14 chr2 30895694 30896151 -222360432 + MLT2B1 LTR ERVL 1 472 -48 213 39 0 0 chr2 30896151 30896177 -222360406 + (TG)n Simple_repeat Simple_repeat 2 27 0 2163 215 38 14 chr2 30896177 30896216 -222360367 + MLT2B1 LTR ERVL 472 509 -11 507 234 91 63 chr2 30896521 30896696 -222359887 + MIR SINE MIR 14 193 -69 2512 63 0 0 chr2 30897972 30898274 -222358309 - AluY SINE Alu -9 302 1 893 103 48 0 chr2 30898983 30899129 -222357454 - L1MB4 LINE L1 0 6180 6028 1701 197 6 3 chr2 30899132 30899487 -222357096 - L1MB4 LINE L1 -215 5965 5610 2593 77 0 0 chr2 30899487 30899798 -222356785 - AluY SINE Alu 0 311 1 304 145 58 29 chr2 30899944 30900013 -222356570 + MER96 DNA MER1_type? 1 71 -104 698 179 166 64 chr2 30900038 30900273 -222356310 - ORSL DNA AcHobo -8 267 9 665 262 0 0 chr2 30900305 30900454 -222356129 - MER96 DNA MER1_type? -24 151 3 516 179 125 9 chr2 30900991 30901103 -222355480 - L2 LINE L2 -4 3309 3185 529 260 66 48 chr2 30901212 30901439 -222355144 - L2 LINE L2 -123 3190 2960 1917 248 59 33 chr2 30901653 30902229 -222354354 + MLT1E LTR MaLR 3 593 0 954 297 148 65 chr2 30902274 30903243 -222353340 + L2 LINE L2 1212 2286 -1028 2291 107 3 7 chr2 30903243 30903552 -222353031 - AluSx SINE Alu -4 308 1 954 297 148 65 chr2 30903552 30903696 -222352887 + L2 LINE L2 2286 2417 -897 391 209 19 0 chr2 30903836 30903941 -222352642 + CT-rich Low_complexity Low_complexity 2 108 0 613 242 16 71 chr2 30903968 30904006 -222352577 + MER5B DNA MER1_type 7 46 -132 2577 43 0 23 chr2 30904006 30904309 -222352274 + AluY SINE Alu 1 296 -15 613 242 16 71 chr2 30904309 30904452 -222352131 + MER5B DNA MER1_type 46 178 0 533 292 180 43 chr2 30904452 30905045 -222351538 + L2 LINE L2 2620 3312 -1 261 286 26 103 chr2 30905077 30905311 -222351272 + L2 LINE L2 2941 3156 -116 329 279 25 0 chr2 30908599 30908678 -222347905 - L1MEc LINE L1 -3967 2429 2349 2141 146 0 0 chr2 30908678 30908986 -222347597 - AluSx SINE Alu -4 308 1 2216 114 17 0 chr2 30909094 30909392 -222347191 + AluSq SINE Alu 5 307 -6 1044 158 0 0 chr2 30909392 30909544 -222347039 + AluSg/x SINE Alu 134 285 -27 224 313 133 7 chr2 30909546 30909696 -222346887 - L2 LINE L2 -960 2354 2186 310 347 138 0 chr2 30910333 30910529 -222346054 + MIR SINE MIR 19 241 -21 * 694 257 24 34 chr2 30910521 30910727 -222345856 - MIR SINE MIR -2 260 57 515 226 189 0 chr2 30910769 30910798 -222345785 + MER5A DNA MER1_type 1 23 -166 201 74 0 0 chr2 30910798 30910825 -222345758 + (CAG)n Simple_repeat Simple_repeat 1 27 0 515 226 189 0 chr2 30910825 30910954 -222345629 + MER5A DNA MER1_type 23 189 0 938 144 0 0 chr2 30911079 30911218 -222345365 - FLAM_C SINE Alu -4 139 1 227 310 50 40 chr2 30911222 30911322 -222345261 - MIR3 SINE MIR -31 177 77 3806 80 20 0 chr2 30911791 30912292 -222344291 - LTR10D LTR ERV1 0 513 3 311 361 41 12 chr2 30913186 30913355 -222343228 + MIR SINE MIR 15 188 -74 228 255 235 0 chr2 30914409 30914511 -222342072 + L2 LINE L2 3188 3313 0 2898 214 60 59 chr2 30914618 30915404 -222341179 - L1MC3 LINE L1 -749 5397 5362 2638 62 3 0 chr2 30915404 30915710 -222340873 - AluSp SINE Alu -6 307 1 2898 214 60 59 chr2 30915710 30916561 -222340022 - L1MC3 LINE L1 -784 5362 4514 21 0 0 0 chr2 30968397 30968418 -222288165 + AT_rich Low_complexity Low_complexity 1 21 0 420 289 68 78 chr2 30968427 30968838 -222287745 - MLT1J LTR MaLR 0 511 105 2195 114 0 3 chr2 30968853 30969151 -222287432 + AluSq SINE Alu 1 297 -16 305 219 57 67 chr2 30969677 30969782 -222286801 - MIR SINE MIR -78 184 81 626 126 50 8 chr2 30970484 30970603 -222285980 + L1MB2 LINE L1 6033 6156 -15 192 256 39 51 chr2 30970742 30970820 -222285763 - MIR SINE MIR -56 206 130 411 289 62 16 chr2 30970968 30971162 -222285421 - MIR SINE MIR -6 256 54 1993 134 0 21 chr2 30971177 30971783 -222284800 + AluSx SINE Alu 1 600 0 324 273 25 16 chr2 30972891 30973012 -222283571 + CT-rich Low_complexity Low_complexity 2 123 0 2470 84 3 0 chr2 30973207 30973516 -222283067 - AluSq SINE Alu -3 310 1 375 202 121 110 chr2 30974255 30974314 -222282269 - MER69A DNA AcHobo -2351 175 118 1882 150 41 0 chr2 30974314 30974607 -222281976 - AluJb SINE Alu -7 305 1 375 202 121 110 chr2 30974607 30974720 -222281863 - MER69A DNA AcHobo -2408 118 1 181 264 19 19 chr2 30975203 30975256 -222281327 - L3 LINE CR1 -1061 516 464 393 281 104 10 chr2 30975288 30975480 -222281103 + MIR SINE MIR 52 261 -1 699 261 109 12 chr2 30975556 30975661 -222280922 - L1ME LINE L1 -303 5818 5725 1576 152 10 84 chr2 30975661 30975971 -222280612 + AluJo SINE Alu 1 287 -25 699 261 109 12 chr2 30975971 30976180 -222280403 - L1ME LINE L1 -396 5725 5464 344 232 155 48 chr2 30976762 30976930 -222279653 + MIR SINE MIR 26 211 -51 189 0 0 0 chr2 30977073 30977094 -222279489 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 270 263 12 0 chr2 30977155 30977235 -222279348 + L1MB8 LINE L1 6083 6163 -15 304 81 44 66 chr2 30977240 30977376 -222279207 + (TATAA)n Simple_repeat Simple_repeat 1 133 0 763 195 84 0 chr2 30977591 30977745 -222278838 + L1PB4 LINE L1 5968 6134 -22 22 0 0 0 chr2 30977859 30977881 -222278702 + AT_rich Low_complexity Low_complexity 1 22 0 439 279 194 37 chr2 30979695 30979989 -222276594 + MLT1K LTR MaLR 249 588 0 362 244 26 58 chr2 30980499 30980655 -222275928 + L3 LINE CR1 1130 1280 -297 226 328 24 24 chr2 30981568 30981693 -222274890 - MIR SINE MIR -124 138 14 237 65 0 0 chr2 30981891 30981922 -222274661 + (TG)n Simple_repeat Simple_repeat 1 31 0 379 294 55 18 chr2 30982429 30982592 -222273991 + MIR3 SINE MIR 33 201 -7 845 169 0 0 chr2 30985322 30985479 -222271104 + FLAM_C SINE Alu 2 158 0 378 0 0 0 chr2 30986434 30986476 -222270107 + (TG)n Simple_repeat Simple_repeat 2 43 0 427 269 86 16 chr2 30988049 30988231 -222268352 - MIR SINE MIR -63 145 3 327 78 0 0 chr2 30988254 30988305 -222268278 + (TG)n Simple_repeat Simple_repeat 2 52 0 2551 56 0 7 chr2 30989492 30989796 -222266787 + AluY SINE Alu 2 303 -8 1938 114 50 0 chr2 30991835 30992115 -222264468 + AluSx SINE Alu 3 296 -16 295 299 15 15 chr2 30992361 30992495 -222264088 + L2 LINE L2 2925 3058 -214 4797 175 17 52 chr2 30992794 30994173 -222262410 - L1MB7 LINE L1 0 6184 4850 1195 184 90 20 chr2 30994380 30994498 -222262085 + AluJo SINE Alu 1 109 -203 194 0 39 0 chr2 30994498 30994524 -222262059 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1195 184 90 20 chr2 30994524 30994660 -222261923 + AluJo SINE Alu 109 273 -39 784 231 7 0 chr2 30994702 30994892 -222261691 + FRAM SINE Alu 1 189 0 208 272 49 0 chr2 30995049 30995130 -222261453 + (CATCC)n Simple_repeat Simple_repeat 2 86 0 334 128 0 116 chr2 30995933 30996019 -222260564 + L1MA8 LINE L1 5258 5333 -813 718 172 0 39 chr2 30996019 30996147 -222260436 + FLAM_C SINE Alu 3 125 -18 5259 152 36 29 chr2 30996161 30996511 -222260072 + L1MA8 LINE L1 5314 5660 -631 2366 94 3 3 chr2 30996511 30996818 -222259765 + AluSx SINE Alu 1 307 -5 5259 152 36 29 chr2 30996818 30997434 -222259149 + L1MA8 LINE L1 5660 6287 -4 36 0 0 0 chr2 30997590 30997626 -222258957 + AT_rich Low_complexity Low_complexity 1 36 0 363 195 0 0 chr2 30997839 30997962 -222258621 + C-rich Low_complexity Low_complexity 1 123 0 291 209 0 0 chr2 30997983 30998098 -222258485 + C-rich Low_complexity Low_complexity 1 115 0 31 0 0 0 chr2 30998198 30998229 -222258354 + AT_rich Low_complexity Low_complexity 1 31 0 359 311 74 43 chr2 30998229 30998302 -222258281 - L1ME4a LINE L1 -169 5952 5883 1708 165 3 52 chr2 30998302 30998630 -222257953 - AluJo SINE Alu 0 312 1 359 311 74 43 chr2 30998630 30999218 -222257365 - L1ME4a LINE L1 -238 5883 5269 213 306 118 12 chr2 31000068 31000153 -222256430 - MIR SINE MIR -86 122 29 658 170 88 82 chr2 31001697 31001738 -222254845 - MER45B DNA AcHobo -545 495 456 2083 139 0 3 chr2 31001738 31002039 -222254544 + AluSx SINE Alu 1 300 -12 658 170 88 82 chr2 31002039 31002144 -222254439 - MER45B DNA AcHobo -584 456 348 2410 208 59 6 chr2 31002151 31002660 -222253923 + MER45B DNA AcHobo 502 1037 -3 2229 96 3 7 chr2 31002673 31002976 -222253607 - AluY SINE Alu -9 302 1 260 306 16 16 chr2 31002993 31003114 -222253469 + L2 LINE L2 3193 3313 0 218 224 0 0 chr2 31003255 31003304 -222253279 - L2 LINE L2 0 3272 3224 414 0 0 0 chr2 31003823 31003869 -222252714 + (CA)n Simple_repeat Simple_repeat 1 46 0 2654 65 0 0 chr2 31004550 31004859 -222251724 + AluSc SINE Alu 1 309 0 379 134 0 45 chr2 31004863 31004930 -222251653 + Alu SINE Alu 231 294 -7 377 298 93 6 chr2 31005168 31005329 -222251254 + MIR SINE MIR 40 214 -48 237 180 0 0 chr2 31005365 31005415 -222251168 + (ATG)n Simple_repeat Simple_repeat 2 51 0 1707 170 24 14 chr2 31005576 31005870 -222250713 - AluJb SINE Alu -15 297 1 261 139 0 0 chr2 31007943 31007986 -222248597 + (A)n Simple_repeat Simple_repeat 1 43 0 189 0 0 0 chr2 31008081 31008102 -222248481 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 466 323 91 0 chr2 31008278 31008464 -222248119 + MIR SINE MIR 57 259 -3 930 118 0 22 chr2 31008537 31008673 -222247910 - FLAM_C SINE Alu 0 133 1 2959 203 48 25 chr2 31008696 31009451 -222247132 + L1M4 LINE L1 4535 5310 -836 2611 61 0 0 chr2 31009451 31009762 -222246821 + AluY SINE Alu 1 311 0 2959 203 48 25 chr2 31009762 31009795 -222246788 + L1M4 LINE L1 5310 5341 -805 560 247 25 12 chr2 31009795 31009953 -222246630 + MER21B LTR ERV1 329 543 -388 634 285 28 11 chr2 31010116 31010341 -222246242 - L1MC4 LINE L1 -295 7700 7403 29 60 0 0 chr2 31010385 31010435 -222246148 + AT_rich Low_complexity Low_complexity 1 50 0 1817 161 3 30 chr2 31010460 31010765 -222245818 + AluJo SINE Alu 1 297 -15 2797 183 58 106 chr2 31010779 31011134 -222245449 - L1ME1 LINE L1 -46 6120 5749 230 53 132 0 chr2 31011134 31011172 -222245411 + MADE1 DNA Mariner 1 43 -37 2797 183 58 106 chr2 31011172 31011587 -222244996 - L1ME1 LINE L1 -417 5749 5352 581 41 31 20 chr2 31011596 31011694 -222244889 + (TTTC)n Simple_repeat Simple_repeat 4 102 0 909 142 7 7 chr2 31011711 31011852 -222244731 - AluJo SINE Alu -170 142 2 371 154 0 0 chr2 31011852 31011917 -222244666 + L1MA10 LINE L1 6264 6328 -6 503 208 44 153 chr2 31011928 31012202 -222244381 + HAL1 LINE L1 2250 2493 -14 439 225 125 42 chr2 31013229 31013469 -222243114 + L1ME4a LINE L1 5862 6121 0 184 253 114 0 chr2 31013761 31013840 -222242743 - L2 LINE L2 0 3272 3185 229 238 0 0 chr2 31013928 31013970 -222242613 - MLT1A1 LTR MaLR 0 374 333 1633 174 11 3 chr2 31013972 31014259 -222242324 + AluJb SINE Alu 1 289 -23 2179 112 3 19 chr2 31014270 31014584 -222241999 + AluSx SINE Alu 3 311 -1 1427 181 168 3 chr2 31014587 31014879 -222241704 - MLT1A1 LTR MaLR -25 340 1 275 288 186 17 chr2 31015084 31015261 -222241322 - MIR SINE MIR -50 212 6 571 239 142 13 chr2 31015396 31015551 -222241032 + MER5B DNA MER1_type 1 175 -3 209 232 134 49 chr2 31015910 31015992 -222240591 - MIR3 SINE MIR -23 185 97 498 260 71 41 chr2 31016248 31016417 -222240166 - MIR SINE MIR -48 214 41 22 0 0 0 chr2 31016565 31016587 -222239996 + AT_rich Low_complexity Low_complexity 1 22 0 564 245 37 46 chr2 31017669 31017718 -222238865 - L1ME1 LINE L1 -5 6161 6113 2568 93 5 86 chr2 31017718 31017769 -222238814 - THE1C LTR MaLR 0 375 321 180 0 0 0 chr2 31017769 31017789 -222238794 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2324 68 0 4 chr2 31017792 31018073 -222238510 - AluY SINE Alu -31 280 1 2568 93 5 86 chr2 31018073 31018425 -222238158 - THE1C LTR MaLR -56 319 1 564 245 37 46 chr2 31018425 31018591 -222237992 - L1ME1 LINE L1 -53 6113 5948 1670 176 109 40 chr2 31018591 31018967 -222237616 + MLT1D LTR MaLR 1 402 -103 2516 193 36 22 chr2 31018968 31019466 -222237117 + MLT1D LTR MaLR 1 505 0 189 250 111 0 chr2 31019471 31019543 -222237040 + MIR SINE MIR 118 197 -65 673 226 63 0 chr2 31019837 31019996 -222236587 - MER74A LTR ERVL 0 558 390 710 152 65 43 chr2 31019999 31020106 -222236477 + FLAM_C SINE Alu 2 114 -198 1514 94 10 0 chr2 31020106 31020308 -222236275 - AluSp SINE Alu -10 303 100 710 152 65 43 chr2 31020308 31020338 -222236245 + FLAM_C SINE Alu 114 142 -170 1525 183 147 3 chr2 31020340 31020674 -222235909 - MER74A LTR ERVL -163 395 14 2392 86 7 0 chr2 31020678 31020982 -222235601 + AluSp SINE Alu 1 306 -7 1933 171 0 0 chr2 31021138 31021443 -222235140 - AluSx SINE Alu -7 305 1 484 226 120 23 chr2 31021448 31021581 -222235002 + MLT1L LTR MaLR 314 459 -156 676 202 48 16 chr2 31021583 31021707 -222234876 + FLAM_A SINE Alu 1 128 -14 338 150 98 94 chr2 31021707 31021838 -222234745 + AluJo/FRAM SINE Alu 181 259 -43 * 346 279 61 28 chr2 31021828 31022016 -222234567 + MLT1L LTR MaLR 334 573 0 955 275 75 36 chr2 31022173 31022610 -222233973 - LTR33 LTR ERVL -6 515 55 2001 130 3 3 chr2 31022610 31022911 -222233672 + AluSp SINE Alu 1 301 -12 955 275 75 36 chr2 31022911 31022968 -222233615 - LTR33 LTR ERVL -466 55 2 1097 102 0 32 chr2 31023699 31023856 -222232727 + Charlie3 DNA MER1_type 2554 2705 -5 328 286 52 0 chr2 31023860 31023937 -222232646 + HERV16 LTR ERVL 2781 2861 -2135 650 226 36 20 chr2 31023939 31024130 -222232453 - L1MD3 LINE L1 -2 7968 7593 538 365 27 14 chr2 31024141 31024360 -222232223 + HERV16 LTR ERVL 2869 3090 -1906 2078 138 7 0 chr2 31024362 31024667 -222231916 + AluJb SINE Alu 1 307 -5 202 339 0 0 chr2 31025591 31025650 -222230933 + MIR SINE MIR 40 98 -110 192 335 73 24 chr2 31027530 31027694 -222228889 + MIR SINE MIR 49 220 -42 547 248 47 13 chr2 31027745 31027894 -222228689 - MIR SINE MIR -34 228 75 23 33 0 0 chr2 31028000 31028030 -222228553 + AT_rich Low_complexity Low_complexity 1 30 0 2319 96 3 0 chr2 31028248 31028550 -222228033 - AluSp SINE Alu -10 303 1 1536 230 43 84 chr2 31029538 31030380 -222226203 + L1MB8 LINE L1 5071 5851 -327 340 194 30 0 chr2 31030382 31030449 -222226134 + L1ME LINE L1 5741 5809 -361 340 194 30 0 chr2 31030451 31030518 -222226065 + L1ME LINE L1 5741 5809 -361 340 194 30 0 chr2 31030520 31030587 -222225996 + L1ME LINE L1 5741 5809 -361 * 1381 205 91 40 chr2 31030563 31030993 -222225590 + L1ME3 LINE L1 5711 6162 0 194 301 108 24 chr2 31032342 31032425 -222224158 - L2 LINE L2 -47 3225 3136 706 230 169 33 chr2 31032563 31032776 -222223807 - MIR SINE MIR -19 243 2 1740 164 16 19 chr2 31033188 31033498 -222223085 - AluJo SINE Alu -3 309 1 958 221 62 92 chr2 31034063 31034335 -222222248 - MLT1D LTR MaLR 0 505 204 1832 148 6 38 chr2 31034367 31034685 -222221898 + AluJo SINE Alu 1 308 -4 622 245 88 5 chr2 31034687 31034903 -222221680 - L1M4 LINE L1 -2520 3626 3393 2569 196 131 38 chr2 31034932 31035651 -222220932 - L1MDa LINE L1 -5736 804 19 22 0 0 0 chr2 31035894 31035916 -222220667 + AT_rich Low_complexity Low_complexity 1 22 0 1090 221 70 45 chr2 31036118 31036517 -222220066 + LTR37A LTR ERV1 18 426 0 257 352 71 31 chr2 31036526 31036722 -222219861 + MIR SINE MIR 39 242 -20 180 321 104 8 chr2 31038933 31039067 -222217516 + L2 LINE L2 2214 2360 -954 1480 213 125 103 chr2 31039294 31040032 -222216551 + MER21B LTR ERV1 1 754 -109 211 297 0 0 chr2 31040045 31040109 -222216474 - MIR SINE MIR -22 240 177 792 188 0 0 chr2 31040178 31040311 -222216272 - FLAM_A SINE Alu 0 133 1 224 254 254 9 chr2 31040323 31040433 -222216150 - MIR SINE MIR -110 152 16 2747 10 0 7 chr2 31040523 31040831 -222215752 - AluY SINE Alu -5 306 1 263 298 33 16 chr2 31041380 31041501 -222215082 - MARNA DNA Mariner -191 395 273 664 152 0 29 chr2 31041765 31041870 -222214713 + FLAM_A SINE Alu 26 127 -15 31 44 0 0 chr2 31041884 31041929 -222214654 + AT_rich Low_complexity Low_complexity 1 45 0 431 143 83 0 chr2 31042014 31042098 -222214485 - L1ME4a LINE L1 -217 5904 5814 635 292 83 41 chr2 31042117 31042245 -222214338 - L1ME4a LINE L1 -224 5897 5776 1810 169 78 3 chr2 31042245 31042564 -222214019 - MER2 DNA MER2_type -1 343 1 635 292 83 41 chr2 31042564 31042895 -222213688 - L1ME4a LINE L1 -345 5776 5479 703 169 81 37 chr2 31043632 31043768 -222212815 - FLAM_C SINE Alu 0 143 2 1264 229 130 50 chr2 31043798 31044261 -222212322 + MLT1D LTR MaLR 1 500 -5 226 26 79 0 chr2 31044981 31045019 -222211564 + T-rich Low_complexity Low_complexity 5 45 0 761 214 15 0 chr2 31045022 31045153 -222211430 - FLAM_C SINE Alu 0 133 1 359 238 164 16 chr2 31045389 31045511 -222211072 - MER5A DNA MER1_type 0 189 50 275 278 132 62 chr2 31045410 31045554 -222211029 + MER5A DNA MER1_type 34 187 -2 * 21 36 0 0 chr2 31045559 31045587 -222210996 + AT_rich Low_complexity Low_complexity 1 28 0 7974 32 0 9 chr2 31045697 31047183 -222209400 - L1PA5 LINE L1 0 6154 4675 2184 193 39 2 chr2 31047266 31047283 -222209300 - L1ME LINE L1 -527 5594 5579 1877 137 59 0 chr2 31047283 31047589 -222208994 - L1MB5 LINE L1 0 6174 5851 2184 193 39 2 chr2 31047589 31048311 -222208272 - L1ME LINE L1 -542 5579 4812 1841 97 56 103 chr2 31048329 31048650 -222207933 - AluY SINE Alu -5 306 1 997 124 0 7 chr2 31048650 31048787 -222207796 - AluSq/x SINE Alu -176 137 2 608 193 45 115 chr2 31048799 31049043 -222207540 - LTR8A LTR ERV1 -214 513 287 1073 177 61 139 chr2 31049090 31049400 -222207183 - LTR8 LTR ERV1 -425 266 1 2712 204 60 49 chr2 31049401 31049635 -222206948 - L1ME LINE L1 -1371 4775 4545 2344 88 0 3 chr2 31049635 31049969 -222206614 - AluSg1 SINE Alu 0 333 1 2232 118 0 0 chr2 31049971 31050267 -222206316 - AluSx SINE Alu -16 296 1 2712 204 60 49 chr2 31050267 31050796 -222205787 - L1ME LINE L1 -1601 4545 3999 212 267 23 30 chr2 31051909 31052040 -222204543 + (TA)n Simple_repeat Simple_repeat 1 130 0 680 213 158 52 chr2 31052780 31053146 -222203437 - LTR37A LTR ERV1 -21 405 1 654 146 82 27 chr2 31053184 31053294 -222203289 - FLAM_A SINE Alu -16 126 11 1922 165 0 10 chr2 31053407 31053710 -222202873 - AluJo SINE Alu -12 300 1 1593 170 19 15 chr2 31053775 31054045 -222202538 - AluJo SINE Alu -29 283 13 244 349 135 21 chr2 31054556 31054748 -222201835 + L3 LINE CR1 1353 1566 -11 594 275 67 10 chr2 31054893 31055086 -222201497 - MIR SINE MIR 0 262 59 2763 164 15 19 chr2 31055110 31055573 -222201010 + MER1A DNA MER1_type 69 529 0 22 0 0 0 chr2 31056826 31056848 -222199735 + AT_rich Low_complexity Low_complexity 1 22 0 807 176 81 0 chr2 31057288 31057424 -222199159 + FRAM SINE Alu 1 144 -32 279 79 0 0 chr2 31057438 31057476 -222199107 + (TAGG)n Simple_repeat Simple_repeat 1 38 0 1254 229 86 51 chr2 31057760 31057974 -222198609 + L1ME3 LINE L1 5689 5894 -268 1597 178 0 57 chr2 31057974 31058305 -222198278 - AluJo SINE Alu 0 312 1 1254 229 86 51 chr2 31058305 31058522 -222198061 + L1ME3 LINE L1 5894 6135 -27 394 294 46 0 chr2 31058606 31058715 -222197868 + MIR SINE MIR 30 143 -65 1618 157 75 14 chr2 31058973 31059253 -222197330 - AluJb SINE Alu -15 297 1 634 269 14 7 chr2 31059365 31059510 -222197073 + FRAM SINE Alu 1 146 -30 261 302 102 66 chr2 31059558 31060039 -222196544 - L2 LINE L2 -60 3253 2691 885 297 87 25 chr2 31060046 31060528 -222196055 - L2 LINE L2 -1010 2304 1793 611 158 0 53 chr2 31061442 31061556 -222195027 + FLAM_C SINE Alu 30 137 -6 189 297 0 31 chr2 31061602 31061666 -222194917 + MIR SINE MIR 7 68 -194 1612 147 34 31 chr2 31061676 31061965 -222194618 + L1MC3 LINE L1 7451 7743 -42 837 149 0 8 chr2 31061965 31062099 -222194484 + FLAM_C SINE Alu 1 133 0 1612 147 34 31 chr2 31062099 31062135 -222194448 + L1MC3 LINE L1 7743 7777 -8 560 275 56 11 chr2 31062179 31062357 -222194226 + MIR SINE MIR 67 252 -10 486 354 6 6 chr2 31062587 31062745 -222193838 + MIR3 SINE MIR 3 160 -48 946 269 24 30 chr2 31062835 31063169 -222193414 + MARNA DNA Mariner 200 531 -55 390 57 0 0 chr2 31063659 31063712 -222192871 + (GTATG)n Simple_repeat Simple_repeat 2 54 0 26 64 0 0 chr2 31065001 31065048 -222191535 + AT_rich Low_complexity Low_complexity 1 47 0 439 253 180 35 chr2 31065418 31065711 -222190872 + MLT1J2 LTR MaLR 105 429 -21 291 250 91 23 chr2 31066228 31066316 -222190267 - L2 LINE L2 -23 3290 3197 687 133 44 7 chr2 31066696 31066831 -222189752 + L1MB8 LINE L1 6038 6177 -1 2493 62 3 0 chr2 31068105 31068409 -222188174 - AluY SINE Alu -6 305 1 725 256 98 28 chr2 31068716 31068931 -222187652 - MIR SINE MIR 0 262 33 2156 89 48 10 chr2 31068958 31069250 -222187333 - AluY SINE Alu -8 303 1 202 154 154 0 chr2 31069341 31069380 -222187203 + MIR SINE MIR 98 142 -66 1158 189 117 14 chr2 31069568 31069859 -222186724 + MER33 DNA MER1_type 3 323 -1 648 212 171 45 chr2 31070058 31070280 -222186303 - MIR SINE MIR -11 251 2 201 318 143 19 chr2 31071052 31071313 -222185270 - L2 LINE L2 -217 3055 2763 186 43 0 0 chr2 31071332 31071355 -222185228 + (A)n Simple_repeat Simple_repeat 1 23 0 246 297 108 51 chr2 31071720 31071915 -222184668 + MIR SINE MIR 48 253 -9 488 231 177 14 chr2 31072334 31072481 -222184102 - L1MD2 LINE L1 -237 6122 5952 642 175 8 25 chr2 31072630 31072750 -222183833 + AluJo SINE Alu 1 118 -184 190 118 59 0 chr2 31072760 31072811 -222183772 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 1073 158 28 6 chr2 31072822 31072999 -222183584 + AluJo SINE Alu 120 300 -12 270 231 0 0 chr2 31073302 31073354 -222183229 - MER4-int LTR ERV1 -5436 1162 1111 185 156 0 44 chr2 31073356 31073401 -222183182 + (TATG)n Simple_repeat Simple_repeat 1 43 0 24 53 0 0 chr2 31073571 31073609 -222182974 + AT_rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr2 31073713 31073736 -222182847 + AT_rich Low_complexity Low_complexity 1 23 0 287 164 18 18 chr2 31074041 31074096 -222182487 - MIR3 SINE MIR -3 205 151 452 209 60 55 chr2 31074103 31074285 -222182298 - MER20B DNA MER1_type -9 774 592 277 270 16 0 chr2 31074332 31074395 -222182188 - MER20B DNA MER1_type -717 66 3 2342 110 128 11 chr2 31074672 31075054 -222181529 - MSTA LTR MaLR 0 428 2 185 271 262 16 chr2 31075265 31075387 -222181196 + MIR SINE MIR 61 212 -50 1386 170 111 18 chr2 31076781 31077122 -222179461 - LTR25 LTR ERV1 -7 787 415 308 148 148 0 chr2 31077093 31077154 -222179429 - MER51A LTR ERV1 -354 280 211 * 405 165 0 92 chr2 31077285 31077394 -222179189 - MER61E LTR ERV1 -470 99 1 257 241 120 0 chr2 31077419 31077527 -222179056 + MIR SINE MIR 92 212 -50 2202 101 0 7 chr2 31077933 31078241 -222178342 - AluSq SINE Alu -7 306 1 211 271 0 0 chr2 31078326 31078374 -222178209 + L3 LINE CR1 1524 1571 -6 2889 128 16 26 chr2 31079527 31079836 -222176747 + LOR1a LTR ERV1 1 305 -192 405 0 0 0 chr2 31079836 31079881 -222176702 + (TG)n Simple_repeat Simple_repeat 2 46 0 2889 128 16 26 chr2 31079881 31080073 -222176510 + LOR1a LTR ERV1 305 497 0 1298 146 0 33 chr2 31080235 31080448 -222176135 + AluSg/x SINE Alu 91 296 -16 318 252 129 14 chr2 31080787 31080926 -222175657 - L1ME4a LINE L1 -1 6120 5966 1964 180 49 24 chr2 31081130 31081581 -222175002 - L1MB8 LINE L1 -16 6162 5701 1694 172 103 48 chr2 31081581 31082024 -222174559 - MER66A LTR ERV1 0 599 97 715 118 0 17 chr2 31082093 31082212 -222174371 - L1MB8 LINE L1 -480 5704 5588 264 100 0 0 chr2 31082841 31082881 -222173702 + (TG)n Simple_repeat Simple_repeat 2 41 0 182 114 105 29 chr2 31082881 31082986 -222173597 + (CATATA)n Simple_repeat Simple_repeat 2 114 0 22 0 0 0 chr2 31083086 31083108 -222173475 + AT_rich Low_complexity Low_complexity 1 22 0 666 263 89 42 chr2 31083742 31084267 -222172316 - L1MC4a LINE L1 -860 5437 5328 803 245 51 39 chr2 31084324 31084581 -222172002 - L1ME3A LINE L1 -21 6149 5890 23 33 0 0 chr2 31085112 31085142 -222171441 + AT_rich Low_complexity Low_complexity 1 30 0 7099 163 34 14 chr2 31086094 31088262 -222168321 - L1PA13 LINE L1 -2 6161 3931 1877 143 31 0 chr2 31088349 31088635 -222167948 - AluSx SINE Alu -13 299 5 2393 255 74 39 chr2 31088853 31089998 -222166585 - HAL1 LINE L1 -616 1891 707 628 95 0 0 chr2 31090006 31090090 -222166493 - AluS SINE Alu -228 84 1 1455 275 58 41 chr2 31090094 31090165 -222166418 - HAL1 LINE L1 -1800 707 639 1072 164 56 5 chr2 31090165 31090360 -222166223 - MER3 DNA MER1_type 0 209 5 1455 275 58 41 chr2 31090360 31090844 -222165739 - HAL1 LINE L1 -1868 639 143 407 372 64 6 chr2 31091446 31091943 -222164640 - L1MC4a LINE L1 -1885 5923 5398 259 205 0 26 chr2 31092030 31092108 -222164475 + (TA)n Simple_repeat Simple_repeat 1 76 0 593 140 20 10 chr2 31092377 31092477 -222164106 + MER4A LTR ERV1 1 101 -563 * 1966 125 3 24 chr2 31092476 31092827 -222163756 + MER4A LTR ERV1 263 664 0 5023 120 37 5 chr2 31094725 31095481 -222161102 + LTR17 LTR ERV1 1 780 0 4964 93 13 21 chr2 31095496 31096194 -222160389 + HERV17 LTR ERV1 16 707 -7919 5499 98 27 10 chr2 31096462 31097322 -222159261 + HERV17 LTR ERV1 737 1659 -5237 5142 49 18 0 chr2 31097304 31097932 -222158651 + HERV17 LTR ERV1 3940 4578 -4048 * 596 53 0 0 chr2 31097915 31097991 -222158592 + HERV17 LTR ERV1 7473 7548 -1078 * 2461 48 0 0 chr2 31097981 31098273 -222158310 + HERV17 LTR ERV1 8335 8626 0 4888 126 30 8 chr2 31098273 31099036 -222157547 + LTR17 LTR ERV1 1 780 0 832 339 8 0 chr2 31099235 31099474 -222157109 + MIR SINE MIR 22 262 0 25 0 0 0 chr2 31099555 31099580 -222157003 + AT_rich Low_complexity Low_complexity 1 25 0 2338 201 25 98 chr2 31099580 31099658 -222156925 - L1ME1 LINE L1 -18 6148 6066 4056 89 7 0 chr2 31099658 31100206 -222156377 + MER41A LTR ERV1 1 552 -2 2338 201 25 98 chr2 31100206 31100284 -222156299 - L1ME1 LINE L1 -100 6066 5984 2142 100 4 0 chr2 31100284 31100564 -222156019 - AluSc SINE Alu -20 289 9 2338 201 25 98 chr2 31100564 31101137 -222155446 - L1ME1 LINE L1 -182 5984 5472 325 274 24 65 chr2 31101298 31101422 -222155161 + L2 LINE L2 3153 3271 -1 340 297 10 10 chr2 31101638 31101739 -222154844 + MIR3 SINE MIR 69 169 -39 255 173 0 39 chr2 31102124 31102176 -222154407 - L1MEc LINE L1 -5849 547 498 1995 140 3 0 chr2 31102354 31102654 -222153929 + AluSc SINE Alu 1 301 -8 1783 172 6 25 chr2 31103196 31103522 -222153061 + Tigger7 DNA MER2_type 2 321 -412 730 140 103 0 chr2 31103525 31103661 -222152922 + Tigger7 DNA MER2_type 2314 2463 -24 1642 129 117 0 chr2 31103880 31104144 -222152439 - AluSx SINE Alu -17 295 1 1475 163 61 34 chr2 31104573 31104868 -222151715 + MER2 DNA MER2_type 39 341 -4 707 254 57 62 chr2 31104888 31105306 -222151277 - L1ME LINE L1 -4898 1653 1229 411 269 115 0 chr2 31105439 31105543 -222151040 - L2 LINE L2 -5 3267 3152 289 306 0 0 chr2 31106008 31106080 -222150503 + MIR3 SINE MIR 124 195 -13 727 285 8 38 chr2 31106315 31106582 -222150001 + MIR SINE MIR 3 261 -1 205 186 0 0 chr2 31106583 31106626 -222149957 + T-rich Low_complexity Low_complexity 3 45 0 444 216 144 0 chr2 31106915 31107026 -222149557 - MLT1J LTR MaLR -317 194 68 350 321 113 6 chr2 31108093 31108252 -222148331 - L3 LINE CR1 -11 1566 1391 196 339 46 0 chr2 31108402 31108467 -222148116 - L3 LINE CR1 -30 1547 1480 183 191 21 64 chr2 31108473 31108520 -222148063 + L2 LINE L2 3262 3306 -7 1378 228 29 0 chr2 31109330 31109611 -222146972 - AluJo SINE Alu -13 289 1 2365 83 0 3 chr2 31109751 31110051 -222146532 + AluSg SINE Alu 1 299 -11 466 237 63 139 chr2 31110600 31111030 -222145553 - L1ME3A LINE L1 -7 6097 5701 369 0 0 0 chr2 31112990 31113031 -222143552 + (TG)n Simple_repeat Simple_repeat 2 42 0 1998 78 10 61 chr2 31113035 31113331 -222143252 - AluY SINE Alu -30 281 1 651 247 70 26 chr2 31113405 31113632 -222142951 - MLT1G LTR MaLR -353 237 1 344 310 46 23 chr2 31113702 31113876 -222142707 + L1M4 LINE L1 3337 3514 -2632 6576 201 32 28 chr2 31114204 31115850 -222140733 + L1M2 LINE L1 1375 3013 -3835 2690 13 3 3 chr2 31115850 31116151 -222140432 + AluYb8 SINE Alu 1 301 -17 6576 201 32 28 chr2 31116151 31116273 -222140310 + L1M2 LINE L1 3013 3133 -3715 279 79 0 0 chr2 31116273 31116311 -222140272 + (CA)n Simple_repeat Simple_repeat 2 39 0 6576 201 32 28 chr2 31116311 31117123 -222139460 + L1M2 LINE L1 3133 3971 -2877 1844 116 51 3 chr2 31117123 31117415 -222139168 + AluSx SINE Alu 1 306 -6 6576 201 32 28 chr2 31117415 31117704 -222138879 + L1M2 LINE L1 3971 4257 -2591 2151 80 31 3 chr2 31117718 31118004 -222138579 - AluSc SINE Alu -15 294 1 853 176 28 50 chr2 31118004 31118186 -222138397 - FRAM SINE Alu -6 170 1 261 349 122 26 chr2 31118533 31118722 -222137861 - MIR SINE MIR -27 235 29 30 69 0 0 chr2 31118727 31118785 -222137798 + AT_rich Low_complexity Low_complexity 1 58 0 430 281 160 44 chr2 31118974 31119409 -222137174 - L1MC4a LINE L1 -1893 5915 5417 2230 107 10 0 chr2 31119409 31119717 -222136866 - AluSq SINE Alu -2 311 1 430 281 160 44 chr2 31119717 31119761 -222136822 - L1MC4a LINE L1 -2391 5417 5380 734 145 76 15 chr2 31120033 31120164 -222136419 + FRAM SINE Alu 24 162 -14 230 253 115 23 chr2 31120320 31120407 -222136176 - L1MC4a LINE L1 -1311 4835 4741 1103 275 78 6 chr2 31120517 31121234 -222135349 - L1ME3A LINE L1 -538 5560 4780 241 208 19 0 chr2 31121249 31121302 -222135281 - L1ME3A LINE L1 -1366 4714 4661 3120 263 100 22 chr2 31121440 31122822 -222133761 - L1ME3A LINE L1 -1680 4400 2912 435 257 20 33 chr2 31122911 31123063 -222133520 - L1ME3A LINE L1 -5901 169 20 218 310 42 14 chr2 31123126 31123197 -222133386 - L3 LINE CR1 -4 1573 1501 22 0 0 0 chr2 31125050 31125072 -222131511 + AT_rich Low_complexity Low_complexity 1 22 0 356 277 200 29 chr2 31126255 31126605 -222129978 + MLT1L LTR MaLR 196 605 -10 5401 91 16 3 chr2 31126957 31127713 -222128870 - MER4E LTR ERV1 0 766 1 3402 225 69 33 chr2 31128915 31129739 -222126844 - L1MC3 LINE L1 -7 7778 6907 1650 146 0 87 chr2 31129739 31130061 -222126522 - AluJo SINE Alu -18 294 1 3402 225 69 33 chr2 31130061 31130276 -222126307 - L1MC3 LINE L1 -878 6907 6701 1076 211 48 81 chr2 31130276 31130821 -222125762 - MLT1D LTR MaLR 0 505 1 362 169 0 0 chr2 31130821 31130880 -222125703 - L1MD3 LINE L1 -1268 6727 6669 2791 13 0 0 chr2 31132289 31132594 -222123989 + AluYb8 SINE Alu 2 306 -12 822 254 102 8 chr2 31133198 31133434 -222123149 + MIR SINE MIR 4 261 -1 559 296 54 50 chr2 31133601 31134080 -222122503 + HAL1 LINE L1 1180 1660 -847 1452 139 165 0 chr2 31134581 31134848 -222121735 - AluJb SINE Alu 0 312 2 986 206 14 28 chr2 31134850 31135068 -222121515 - MER58B DNA MER1_type -10 331 117 397 200 90 38 chr2 31135401 31135498 -222121085 + MER5C DNA MER1_type 1 91 -233 2395 70 7 0 chr2 31135498 31135799 -222120784 - AluSp SINE Alu -10 303 1 397 200 90 38 chr2 31135799 31135925 -222120658 + MER5C DNA MER1_type 91 294 -30 402 21 0 0 chr2 31136039 31136086 -222120497 + (TG)n Simple_repeat Simple_repeat 1 47 0 2319 101 0 0 chr2 31136173 31136470 -222120113 - AluSq SINE Alu -16 297 1 22 35 0 0 chr2 31136626 31136655 -222119928 + AT_rich Low_complexity Low_complexity 1 29 0 562 291 23 18 chr2 31136661 31136881 -222119702 + L1ME3 LINE L1 4898 5118 -1028 1675 267 90 60 chr2 31136968 31137073 -222119510 + L1ME3 LINE L1 5292 5392 -770 2400 90 7 0 chr2 31137073 31137374 -222119209 + AluSx SINE Alu 1 303 -9 1675 267 90 60 chr2 31137374 31138112 -222118471 + L1ME3 LINE L1 5392 6160 -2 383 0 21 0 chr2 31139034 31139081 -222117502 + (TG)n Simple_repeat Simple_repeat 2 49 0 1884 124 7 49 chr2 31139085 31139392 -222117191 - AluSx SINE Alu -18 294 1 2377 90 0 3 chr2 31139697 31139998 -222116585 - AluSq SINE Alu -13 300 1 323 269 45 135 chr2 31141073 31141146 -222115437 - MIR3 SINE MIR -39 169 91 637 219 0 0 chr2 31141146 31141260 -222115323 + FLAM_A SINE Alu 2 115 -18 195 42 0 0 chr2 31141263 31141287 -222115296 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 323 269 45 135 chr2 31141287 31141365 -222115218 - MIR3 SINE MIR -119 89 28 576 118 129 0 chr2 31141809 31141902 -222114681 - FRAM SINE Alu -10 166 62 23 0 0 0 chr2 31142908 31142931 -222113652 + AT_rich Low_complexity Low_complexity 1 23 0 292 270 127 8 chr2 31143654 31143780 -222112803 - L1ME4a LINE L1 -14 6107 5967 2030 162 19 65 chr2 31143858 31144290 -222112293 - MLT2D LTR ERVL -2 412 1 895 299 53 38 chr2 31144425 31144823 -222111760 - L2 LINE L2 -94 3219 2816 21 82 0 0 chr2 31145878 31145927 -222110656 + AT_rich Low_complexity Low_complexity 1 49 0 1814 259 43 13 chr2 31146090 31146630 -222109953 + LTR38 LTR ERV1 1 556 0 2363 94 0 0 chr2 31147253 31147562 -222109021 - AluY SINE Alu -2 309 1 237 65 0 0 chr2 31147620 31147651 -222108932 + (A)n Simple_repeat Simple_repeat 1 31 0 24 0 0 0 chr2 31149112 31149136 -222107447 + AT_rich Low_complexity Low_complexity 1 24 0 451 309 60 12 chr2 31149157 31149325 -222107258 - MIR SINE MIR -1 261 86 245 236 69 14 chr2 31149685 31149757 -222106826 - MIR3 SINE MIR -24 184 109 382 275 37 18 chr2 31151117 31151226 -222105357 + MER5B DNA MER1_type 7 117 -61 230 312 65 11 chr2 31151324 31151417 -222105166 - MIR SINE MIR -154 108 11 375 357 92 46 chr2 31151883 31152317 -222104266 + L2 LINE L2 2433 2886 -428 254 325 0 0 chr2 31152521 31152598 -222103985 + L2 LINE L2 3222 3298 -15 1395 140 0 10 chr2 31152698 31152905 -222103678 + AluSg/x SINE Alu 85 289 -23 368 295 101 82 chr2 31153781 31154137 -222102446 + L2 LINE L2 2891 3253 -19 229 200 67 0 chr2 31155825 31155900 -222100683 + (TTATA)n Simple_repeat Simple_repeat 5 84 0 26 0 0 0 chr2 31156475 31156501 -222100082 + AT_rich Low_complexity Low_complexity 1 26 0 194 250 96 0 chr2 31156779 31156831 -222099752 + MIR SINE MIR 21 77 -131 473 324 6 18 chr2 31157745 31157915 -222098668 - L3 LINE CR1 -121 1456 1289 894 196 16 5 chr2 31158119 31158303 -222098280 - MLT1C LTR MaLR 0 467 282 525 256 47 10 chr2 31158730 31159001 -222097582 - L1MD3 LINE L1 -3 7982 6026 274 204 78 19 chr2 31159513 31159616 -222096967 + HAL1 LINE L1 1950 2058 -449 480 208 94 52 chr2 31159686 31159840 -222096743 + L1MDa LINE L1 2419 2584 -3956 2182 102 10 0 chr2 31159840 31160134 -222096449 - AluY SINE Alu -14 297 1 480 208 94 52 chr2 31160134 31160171 -222096412 + L1MDa LINE L1 2584 2618 -3922 1019 217 68 37 chr2 31160171 31160466 -222096117 + MER82 DNA MER2_type 2 305 -348 253 322 34 42 chr2 31160941 31161059 -222095524 - MIR SINE MIR -133 129 13 503 331 105 57 chr2 31161876 31161984 -222094599 + L2 LINE L2 2465 2566 -747 1829 237 41 26 chr2 31161984 31162474 -222094109 - MLT1D LTR MaLR -4 501 5 503 331 105 57 chr2 31162474 31163183 -222093400 + L2 LINE L2 2566 3311 -2 569 155 7 92 chr2 31163289 31163431 -222093152 - THE1C LTR MaLR -19 356 227 22 70 0 0 chr2 31163558 31163601 -222092982 + GC_rich Low_complexity Low_complexity 1 43 0 1413 157 105 49 chr2 31163929 31164253 -222092330 + MER66A LTR ERV1 137 478 0 2040 171 53 29 chr2 31164253 31164704 -222091879 + L1MB8 LINE L1 5701 6162 -16 347 252 129 14 chr2 31164908 31165047 -222091536 + L1ME4a LINE L1 5966 6120 -1 1264 146 5 33 chr2 31165386 31165598 -222090985 - AluSg/x SINE Alu -16 296 91 3133 129 16 26 chr2 31165760 31165952 -222090631 - LOR1a LTR ERV1 0 497 305 405 0 0 0 chr2 31165952 31165997 -222090586 + (CA)n Simple_repeat Simple_repeat 2 46 0 3133 129 16 26 chr2 31165997 31166306 -222090277 - LOR1a LTR ERV1 -192 305 1 203 271 0 0 chr2 31167459 31167507 -222089076 - L3 LINE CR1 -6 1571 1524 2323 73 7 3 chr2 31167592 31167892 -222088691 + AluSx SINE Alu 1 301 -11 504 237 63 139 chr2 31168441 31168871 -222087712 - L1ME3A LINE L1 -7 6163 5767 1192 264 115 58 chr2 31170352 31171463 -222085120 - L1ME3A LINE L1 -2099 4047 2857 216 0 0 0 chr2 31171463 31171487 -222085096 + (TG)n Simple_repeat Simple_repeat 2 25 0 1192 264 115 58 chr2 31171487 31171612 -222084971 - L1ME3A LINE L1 -3289 2857 2741 233 229 0 14 chr2 31171646 31171716 -222084867 + (TAGA)n Simple_repeat Simple_repeat 4 72 0 359 153 339 32 chr2 31172956 31173080 -222083503 - MIR SINE MIR -73 189 28 2431 81 0 0 chr2 31174110 31174405 -222082178 - AluSq SINE Alu -18 295 1 180 288 34 0 chr2 31174405 31174464 -222082119 - L3 LINE CR1 -252 1325 1265 761 228 84 10 chr2 31174818 31175020 -222081563 - L1ME2 LINE L1 -9 6155 5939 279 248 202 18 chr2 31175108 31175217 -222081366 + MIR3 SINE MIR 66 194 -14 224 340 114 37 chr2 31175212 31175562 -222081021 + L2 LINE L2 2383 2759 -555 * 221 289 96 58 chr2 31175763 31175867 -222080716 + L2 LINE L2 3124 3231 -41 608 219 49 0 chr2 31175964 31176087 -222080496 - FLAM_A SINE Alu -5 137 9 255 61 0 0 chr2 31178390 31178423 -222078160 + (T)n Simple_repeat Simple_repeat 1 33 0 240 111 0 0 chr2 31178886 31178922 -222077661 + (T)n Simple_repeat Simple_repeat 1 36 0 252 77 0 0 chr2 31179616 31179655 -222076928 + (CACCT)n Simple_repeat Simple_repeat 1 39 0 255 315 154 6 chr2 31180855 31181017 -222075566 - MLT1K LTR MaLR -6 582 397 339 282 193 36 chr2 31181670 31182007 -222074576 - MLT1K LTR MaLR -197 391 2 100 0 0 9 chr2 31183097 31183190 -222073393 + AT_rich Low_complexity Low_complexity 1 94 -16 2238 112 0 0 chr2 31183190 31183477 -222073106 + AluSx SINE Alu 1 287 -25 100 0 0 9 chr2 31183477 31183494 -222073089 + AT_rich Low_complexity Low_complexity 94 110 0 392 299 63 54 chr2 31183669 31183890 -222072693 + L1MC/D LINE L1 5568 5790 -2018 855 150 66 70 chr2 31183910 31184123 -222072460 + L1MB2 LINE L1 5692 5903 -268 180 161 0 0 chr2 31184326 31184357 -222072226 - L2 LINE L2 -2583 731 701 523 266 43 0 chr2 31184708 31184847 -222071736 - MER5B DNA MER1_type -21 157 13 233 167 0 0 chr2 31184877 31184919 -222071664 + MIR SINE MIR 104 145 -63 2058 106 35 0 chr2 31185052 31185334 -222071249 + AluSx SINE Alu 1 292 -20 180 0 0 0 chr2 31185397 31185417 -222071166 + (A)n Simple_repeat Simple_repeat 1 20 0 938 200 73 0 chr2 31186233 31186398 -222070185 + MER45A DNA AcHobo 1 177 -1 237 245 0 0 chr2 31186442 31186491 -222070092 - MER5B DNA MER1_type -3 175 127 1613 187 47 59 chr2 31187437 31187998 -222068585 - Charlie1b DNA MER1_type -11 512 17 352 245 26 80 chr2 31188057 31188208 -222068375 + MIR3 SINE MIR 15 157 -51 238 368 9 0 chr2 31188211 31188317 -222068266 + MER5B DNA MER1_type 1 107 -71 2881 197 96 6 chr2 31188344 31189161 -222067422 + L1MC4a LINE L1 6842 7746 -62 357 315 9 9 chr2 31189161 31189269 -222067314 + L2 LINE L2 2921 3028 -285 941 144 0 0 chr2 31189772 31189904 -222066679 + FLAM_C SINE Alu 1 132 -1 191 290 87 0 chr2 31189979 31190048 -222066535 - MIR SINE MIR -111 151 77 251 275 12 12 chr2 31190181 31190261 -222066322 + MIR SINE MIR 49 128 -134 277 277 50 20 chr2 31190398 31190499 -222066084 - MIR SINE MIR 0 262 159 554 239 142 31 chr2 31190499 31190805 -222065778 - MLT1G1 LTR MaLR 0 595 183 713 200 0 53 chr2 31190902 31191072 -222065511 - MIR SINE MIR -86 176 16 192 277 85 31 chr2 31191619 31191749 -222064834 + MIR3 SINE MIR 45 181 -27 359 276 112 60 chr2 31191953 31192203 -222064380 - L2 LINE L2 -422 2892 2630 390 259 132 57 chr2 31192943 31193155 -222063428 + MIR SINE MIR 24 251 -11 228 311 148 16 chr2 31193405 31193527 -222063056 - MIR3 SINE MIR -29 179 42 255 170 0 0 chr2 31193536 31193583 -222063000 + CT-rich Low_complexity Low_complexity 3 49 0 1962 146 7 3 chr2 31193585 31193894 -222062689 - AluSx SINE Alu -2 310 1 182 158 26 0 chr2 31194123 31194161 -222062422 - L2 LINE L2 0 3272 3234 2937 83 13 5 chr2 31194183 31194555 -222062028 - THE1C LTR MaLR 0 375 1 234 241 206 50 chr2 31194557 31194698 -222061885 - MIR SINE MIR -17 245 83 1779 261 5 34 chr2 31194698 31195112 -222061471 + MLT2E LTR ERVL 1 402 -226 312 279 51 0 chr2 31195698 31195777 -222060806 + MIR SINE MIR 90 172 -90 243 259 0 0 chr2 31196443 31196497 -222060086 - MIR SINE MIR -74 134 81 212 143 0 48 chr2 31196492 31196534 -222060049 - MIR SINE MIR -4 258 219 * 271 305 55 16 chr2 31198556 31198684 -222057899 + L2 LINE L2 3179 3311 -2 259 304 42 98 chr2 31199826 31200162 -222056421 - L2 LINE L2 -86 3186 2870 577 326 21 0 chr2 31200276 31200463 -222056120 + Charlie8 DNA MER1_type 75 265 -2152 1627 170 49 46 chr2 31201153 31201500 -222055083 + MLT1A1 LTR MaLR 18 365 0 195 42 0 0 chr2 31201660 31201684 -222054899 + (GGGTG)n Simple_repeat Simple_repeat 3 26 0 1102 199 126 111 chr2 31203011 31203408 -222053175 + MER57A LTR ERV1 1 403 0 621 308 155 51 chr2 31203518 31204524 -222052059 - L1MCc LINE L1 -2889 4052 2942 1857 143 7 52 chr2 31204565 31204872 -222051711 - AluSx SINE Alu -19 293 1 201 240 0 0 chr2 31204949 31205024 -222051559 + T-rich Low_complexity Low_complexity 1 75 0 2315 261 100 61 chr2 31205465 31206171 -222050412 - L1MCc LINE L1 -4364 2758 2081 2183 134 0 3 chr2 31206171 31206484 -222050099 - AluSx SINE Alu 0 312 1 2315 261 100 61 chr2 31206484 31207869 -222048714 - L1MCc LINE L1 -5041 2081 365 3143 193 47 78 chr2 31207896 31208419 -222048164 + L1ME1 LINE L1 4878 5416 -750 2205 73 84 0 chr2 31208419 31208706 -222047877 + AluY SINE Alu 1 311 0 3143 193 47 78 chr2 31208706 31209514 -222047069 + L1ME1 LINE L1 5416 6161 -5 416 259 11 106 chr2 31209575 31209849 -222046734 + L1ME LINE L1 2111 2358 -3788 233 229 0 14 chr2 31210081 31210151 -222046432 + (TCTA)n Simple_repeat Simple_repeat 4 72 0 1367 280 114 52 chr2 31210186 31211593 -222044990 + L1ME LINE L1 2741 4235 -1911 2349 64 0 0 chr2 31211677 31211981 -222044602 - AluY SINE Alu 0 304 1 2148 119 3 3 chr2 31212031 31212326 -222044257 - AluSx SINE Alu -17 295 1 545 266 41 35 chr2 31212720 31213010 -222043573 + L1ME LINE L1 4385 4676 -1470 1651 164 11 18 chr2 31213323 31213609 -222042974 - AluJb SINE Alu -10 302 19 1080 274 88 25 chr2 31213613 31214259 -222042324 + L1ME LINE L1 5079 5797 -365 334 239 14 0 chr2 31214383 31214454 -222042129 - MER58 DNA MER1_type -4 2416 2345 277 323 39 15 chr2 31215607 31215737 -222040846 + MIR SINE MIR 130 262 0 275 271 108 23 chr2 31215766 31215895 -222040688 + MIR SINE MIR 117 256 -6 225 336 100 7 chr2 31216105 31216245 -222040338 + MIR3 SINE MIR 16 168 -40 660 197 15 0 chr2 31216902 31217034 -222039549 - Zaphod DNA AcHobo -6 4025 3892 1028 209 171 40 chr2 31217057 31217479 -222039104 + MLT1D LTR MaLR 19 495 -10 2317 130 68 64 chr2 31217621 31218045 -222038538 - MSTB LTR MaLR 0 426 1 201 338 52 0 chr2 31218225 31218302 -222038281 + MIR SINE MIR 61 141 -121 2485 100 0 0 chr2 31218438 31218748 -222037835 - AluSg SINE Alu 0 310 1 1907 115 50 70 chr2 31219795 31220178 -222036405 - THE1C LTR MaLR 0 375 1 274 259 0 47 chr2 31221519 31221604 -222034979 - MER5A DNA MER1_type -101 88 8 502 243 33 66 chr2 31223007 31223188 -222033395 - MER69A DNA AcHobo 0 177 3 408 305 188 0 chr2 31223603 31223816 -222032767 - MIR SINE MIR -2 260 8 2140 115 7 3 chr2 31223861 31224156 -222032427 - AluSq SINE Alu -17 296 1 2429 104 0 0 chr2 31224556 31224863 -222031720 - AluSx SINE Alu -5 307 1 1703 210 51 14 chr2 31225011 31225444 -222031139 - Charlie4a DNA MER1_type -38 470 22 196 329 24 0 chr2 31226234 31226319 -222030264 - MIR3 SINE MIR -5 203 117 210 263 35 0 chr2 31226474 31226531 -222030052 + MIR SINE MIR 124 182 -80 181 272 37 49 chr2 31226607 31226688 -222029895 + L2 LINE L2 3225 3304 -9 205 342 82 64 chr2 31227661 31228050 -222028533 - L2 LINE L2 -11 3261 2866 1976 195 72 9 chr2 31229316 31229763 -222026820 + MLT1D LTR MaLR 29 503 -2 1173 219 162 21 chr2 31229834 31230000 -222026583 + MLT1A2 LTR MaLR 1 142 -232 896 8 33 0 chr2 31230000 31230121 -222026462 + (TC)n Simple_repeat Simple_repeat 2 126 0 1173 219 162 21 chr2 31230121 31230282 -222026301 + MLT1A2 LTR MaLR 142 374 0 375 302 87 41 chr2 31230666 31230838 -222025745 + MIR SINE MIR 55 234 -28 225 211 0 0 chr2 31231508 31231560 -222025023 + (CA)n Simple_repeat Simple_repeat 1 52 0 373 296 118 25 chr2 31231812 31232015 -222024568 + L3 LINE CR1 642 863 -714 547 297 46 32 chr2 31232630 31232849 -222023734 + MIR SINE MIR 35 256 -6 219 316 79 0 chr2 31232886 31232962 -222023621 + MIR SINE MIR 20 101 -161 2971 212 76 37 chr2 31233018 31233638 -222022945 - L1ME1 LINE L1 -8 6953 6359 8003 52 37 1 chr2 31233638 31234322 -222022261 + LTR13 LTR ERVK 1 732 -275 222 37 0 0 chr2 31234322 31234349 -222022234 + (TC)n Simple_repeat Simple_repeat 2 28 0 8003 52 37 1 chr2 31234349 31234636 -222021947 + LTR13 LTR ERVK 732 1007 0 2971 212 76 37 chr2 31234636 31234753 -222021830 - L1ME1 LINE L1 -602 6359 6248 2185 116 10 0 chr2 31234753 31235047 -222021536 - AluSx SINE Alu -13 299 3 2971 212 76 37 chr2 31235047 31235969 -222020614 - L1ME1 LINE L1 -713 6248 5229 2888 253 75 40 chr2 31236013 31236125 -222020458 - L1ME1 LINE L1 -2887 4054 3947 2299 120 0 0 chr2 31236125 31236433 -222020150 - AluSq SINE Alu -5 308 1 2888 253 75 40 chr2 31236433 31237404 -222019179 - L1ME1 LINE L1 -2994 3947 3012 1920 185 5 78 chr2 31237404 31237825 -222018758 - MLT1B LTR MaLR 0 390 1 2888 253 75 40 chr2 31237825 31239755 -222016828 - L1ME1 LINE L1 -3929 3012 791 594 269 39 0 chr2 31240166 31240348 -222016235 - L1ME1 LINE L1 -6211 212 24 1220 290 52 38 chr2 31240627 31241317 -222015266 - L1MC4a LINE L1 -1761 6047 5348 327 286 10 0 chr2 31242666 31242764 -222013819 - MIR SINE MIR -47 215 117 482 348 17 6 chr2 31243946 31244124 -222012459 - MIR SINE MIR -59 203 24 2491 84 0 0 chr2 31244555 31244866 -222011717 + AluY SINE Alu 1 311 0 376 261 90 0 chr2 31244960 31245071 -222011512 - MIR3 SINE MIR -76 132 12 251 225 80 150 chr2 31245504 31245595 -222010988 - MIR SINE MIR -28 234 161 1203 197 33 12 chr2 31245595 31245839 -222010744 - L1MC1 LINE L1 -1 6332 6084 251 225 80 150 chr2 31245839 31245934 -222010649 - MIR SINE MIR -101 161 61 187 336 75 0 chr2 31246208 31246315 -222010268 - L2 LINE L2 -22 3250 3136 367 262 77 36 chr2 31247310 31247451 -222009132 + MER5A DNA MER1_type 4 162 -27 2177 120 7 0 chr2 31247649 31247950 -222008633 - AluSx SINE Alu -9 303 1 260 292 84 26 chr2 31248022 31248176 -222008407 + MIR SINE MIR 75 237 -25 642 237 0 53 chr2 31248176 31248366 -222008217 + LTR41 LTR ERVL 1 180 -593 260 187 13 173 chr2 31248620 31248770 -222007813 + LTR41 LTR ERVL 585 710 -63 722 120 0 0 chr2 31248770 31248870 -222007713 - AluSp/q SINE Alu -20 293 194 450 244 61 9 chr2 31248988 31249103 -222007480 - MIR SINE MIR -109 153 33 212 309 129 64 chr2 31249209 31249442 -222007141 + MIR SINE MIR 13 260 -2 442 293 156 6 chr2 31249887 31250054 -222006529 - MIR SINE MIR -50 212 21 8743 78 1 1 chr2 31250296 31251467 -222005116 + L1P LINE L1 101 1271 -4875 32430 38 4 0 chr2 31251567 31255923 -222000660 - L1P2 LINE L1 -530 5625 1258 645 312 30 5 chr2 31257153 31257352 -221999231 - MIR SINE MIR 0 262 59 263 222 42 14 chr2 31257688 31257760 -221998823 - L2 LINE L2 -8 3305 3232 472 236 203 7 chr2 31257886 31258034 -221998549 + MIR SINE MIR 10 186 -76 3183 124 61 22 chr2 31258139 31258679 -221997904 - MER57A-int LTR ERV1 -6976 561 1 2372 129 63 3 chr2 31258679 31259059 -221997524 - MER57A LTR ERV1 0 403 1 569 140 0 30 chr2 31259059 31259197 -221997386 - L1M LINE L1 -778 5402 5274 2371 95 3 0 chr2 31259959 31260265 -221996318 - AluSc SINE Alu -2 307 1 1501 196 138 49 chr2 31260587 31261016 -221995567 - MLT1C LTR MaLR 0 467 1 2325 85 3 7 chr2 31261139 31261433 -221995150 + AluSg SINE Alu 1 293 -17 359 247 155 32 chr2 31262176 31262395 -221994188 - L1ME4a LINE L1 -28 6093 5848 255 346 10 0 chr2 31262887 31262988 -221993595 - MIR SINE MIR -110 152 51 999 232 51 42 chr2 31263242 31263578 -221993005 + LTR16A LTR ERVL 106 444 -6 423 283 113 31 chr2 31263876 31263992 -221992591 - MER5B DNA MER1_type 0 178 42 1703 25 10 0 chr2 31263992 31264218 -221992365 + L1PA4 LINE L1 5940 6167 0 423 283 113 31 chr2 31264218 31264258 -221992325 - MER5B DNA MER1_type -136 42 7 547 262 48 14 chr2 31264509 31264654 -221991929 + MER5A DNA MER1_type 39 188 -1 233 56 0 28 chr2 31265719 31265755 -221990828 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 513 71 0 14 chr2 31265755 31265825 -221990758 - L1PA4 LINE L1 -24 6131 6063 517 274 109 71 chr2 31265925 31266191 -221990392 - L3 LINE CR1 -694 883 608 380 220 0 100 chr2 31266397 31266497 -221990086 + L1MC4 LINE L1 6614 6703 -1339 * 394 207 38 7 chr2 31266425 31266521 -221990062 - L1MC4 LINE L1 -1339 6983 1995 1384 267 39 5 chr2 31266918 31267530 -221989053 + L1ME LINE L1 5167 5801 -361 586 197 84 0 chr2 31267613 31267636 -221988947 - L1MA10 LINE L1 -1 6333 6311 6164 223 85 22 chr2 31267636 31270620 -221985963 - L1ME1 LINE L1 -23 6143 2815 267 272 228 0 chr2 31270810 31270924 -221985659 - MIR SINE MIR 0 262 123 291 228 18 0 chr2 31271256 31271313 -221985270 - L2 LINE L2 -7 3306 3249 610 148 99 68 chr2 31271594 31271756 -221984827 + MLT1B LTR MaLR 7 173 -217 573 145 92 72 chr2 31271748 31271854 -221984729 + MLT1B LTR MaLR 301 412 -55 * 998 31 78 8 chr2 31271854 31271982 -221984601 - MER85 DNA T2_type 0 139 3 573 145 92 72 chr2 31271982 31272027 -221984556 + MLT1B LTR MaLR 412 455 -12 493 314 0 19 chr2 31272894 31273050 -221983533 - MIR SINE MIR -2 260 108 489 125 12 12 chr2 31273669 31273749 -221982834 + MER116 DNA Mariner 1 80 0 317 344 121 9 chr2 31274316 31274540 -221982043 - MIR SINE MIR -8 254 6 205 228 238 10 chr2 31275691 31275792 -221980791 + MIR SINE MIR 23 146 -116 243 206 16 32 chr2 31276395 31276458 -221980125 - MIR SINE MIR -1 261 200 211 306 85 0 chr2 31277435 31277526 -221979057 - MIR SINE MIR -60 148 53 755 289 74 8 chr2 31277842 31278084 -221978499 - MIR SINE MIR 0 262 5 340 289 88 18 chr2 31278245 31278359 -221978224 + MIR SINE MIR 141 262 0 2224 107 3 0 chr2 31278557 31278857 -221977726 - AluSx SINE Alu -11 301 1 206 214 57 29 chr2 31279188 31279258 -221977325 + CT-rich Low_complexity Low_complexity 4 75 0 400 325 8 0 chr2 31279588 31279705 -221976878 - MIR SINE MIR -14 248 131 1240 150 14 10 chr2 31279705 31279912 -221976671 + MER3 DNA MER1_type 1 208 -1 273 89 44 0 chr2 31280798 31280843 -221975740 - MLT2B1 LTR ERVL 0 515 469 1165 209 27 51 chr2 31280935 31281391 -221975192 - MLT2B1 LTR ERVL -32 488 1 232 271 176 12 chr2 31281497 31281582 -221975001 + MIR SINE MIR 17 115 -147 208 317 84 56 chr2 31281586 31281728 -221974855 + MER5B DNA MER1_type 4 149 -29 229 248 60 53 chr2 31282223 31282356 -221974227 - L1 LINE L1 -2196 3950 3817 410 289 112 67 chr2 31282533 31282907 -221973676 - L1 LINE L1 -2465 3681 3291 499 27 0 95 chr2 31282962 31283036 -221973547 - MADE1 DNA Mariner 0 80 14 254 259 37 0 chr2 31283283 31283337 -221973246 - MIR SINE MIR -7 255 200 355 245 27 58 chr2 31283466 31283621 -221972962 - MIR SINE MIR -65 143 40 377 272 53 18 chr2 31285535 31285649 -221970934 - MIR3 SINE MIR -53 155 38 1704 100 77 4 chr2 31286354 31286614 -221969969 + AluSx SINE Alu 1 279 -33 962 304 59 23 chr2 31287219 31287910 -221968673 - L1M4 LINE L1 -1353 4793 4078 1618 306 116 62 chr2 31287956 31289418 -221967165 - L1M4 LINE L1 -2385 3761 2221 428 302 103 53 chr2 31289525 31289744 -221966839 - HAL1 LINE L1 -860 1647 1440 2156 88 3 26 chr2 31289744 31290049 -221966534 + AluSc SINE Alu 1 298 -11 428 302 103 53 chr2 31290049 31290246 -221966337 - HAL1 LINE L1 -1067 1440 1210 258 139 0 0 chr2 31290251 31290287 -221966296 - MER5A DNA MER1_type -139 50 15 269 250 119 12 chr2 31290879 31290963 -221965620 - L2 LINE L2 -31 3282 3190 470 241 44 29 chr2 31290987 31291124 -221965459 - MIR SINE MIR -70 192 54 227 311 0 29 chr2 31291891 31291994 -221964589 + L2 LINE L2 2922 3021 -251 214 320 113 0 chr2 31292111 31292208 -221964375 - MIR SINE MIR -83 125 18 252 267 35 76 chr2 31292811 31292983 -221963600 - L2 LINE L2 -144 3128 2964 353 194 0 16 chr2 31293224 31293286 -221963297 - L2 LINE L2 -5 3308 3248 288 77 0 0 chr2 31293940 31293979 -221962604 + (GGAA)n Simple_repeat Simple_repeat 3 41 0 184 247 117 52 chr2 31294787 31294864 -221961719 - L2 LINE L2 -40 3232 3151 516 236 24 16 chr2 31295388 31295511 -221961072 - MIR3 SINE MIR 0 208 85 217 241 57 82 chr2 31296987 31297145 -221959438 - MIR3 SINE MIR -15 193 40 230 224 57 85 chr2 31297995 31298103 -221958480 - MIR SINE MIR -105 103 8 244 316 58 36 chr2 31298639 31298778 -221957805 - MIR SINE MIR -52 210 69 718 252 89 65 chr2 31299917 31300323 -221956260 - MLT1J LTR MaLR -2 444 19 229 322 83 33 chr2 31300403 31300524 -221956059 - MIR SINE MIR -56 152 26 308 273 23 11 chr2 31300954 31301042 -221955541 + MER117 DNA MER1_type 109 197 0 322 225 45 11 chr2 31301490 31301579 -221955004 - MER103 DNA DNA -11 155 64 1537 67 5 19 chr2 31302346 31302556 -221954027 + AluY SINE Alu 83 289 -22 294 248 73 37 chr2 31302888 31302997 -221953586 + MIR SINE MIR 19 131 -131 734 194 9 4 chr2 31303384 31303620 -221952963 + GA-rich Low_complexity Low_complexity 1 237 0 333 130 0 0 chr2 31303789 31303835 -221952748 - Alu SINE Alu -254 46 1 456 208 94 44 chr2 31304389 31304548 -221952035 + L1ME3A LINE L1 5968 6134 -36 265 287 45 32 chr2 31304696 31304853 -221951730 + L2 LINE L2 3122 3280 -33 245 293 24 0 chr2 31304879 31304961 -221951622 + GA-rich Low_complexity Low_complexity 2 85 0 261 304 10 10 chr2 31306142 31306244 -221950339 - Charlie7 DNA MER1_type -3 2609 2508 307 282 107 0 chr2 31306360 31306463 -221950120 - MIR SINE MIR -62 146 33 216 317 30 30 chr2 31307495 31307596 -221948987 - MER5A DNA MER1_type -2 187 87 273 267 178 0 chr2 31307800 31307890 -221948693 + L2 LINE L2 3208 3313 0 243 61 0 0 chr2 31308324 31308357 -221948226 + (TTG)n Simple_repeat Simple_repeat 2 34 0 271 245 75 43 chr2 31308471 31308565 -221948018 - MIR SINE MIR -110 152 56 1586 118 9 129 chr2 31308677 31309009 -221947574 + AluJb SINE Alu 1 292 -20 695 261 16 16 chr2 31309074 31309258 -221947325 + MIR SINE MIR 79 262 0 1976 110 0 7 chr2 31310268 31310550 -221946033 + AluSx SINE Alu 15 294 -18 330 26 0 0 chr2 31312268 31312307 -221944276 + (CA)n Simple_repeat Simple_repeat 2 40 0 200 268 36 36 chr2 31312983 31313095 -221943488 + (TCTCTG)n Simple_repeat Simple_repeat 3 114 0 2127 97 30 0 chr2 31313125 31313423 -221943160 - AluSg SINE Alu -1 309 3 321 287 78 8 chr2 31314119 31314248 -221942335 - MIR3 SINE MIR -7 201 64 2228 71 0 3 chr2 31314567 31314967 -221941616 - AluY SINE Alu 0 399 1 243 267 22 0 chr2 31315545 31315680 -221940903 + CT-rich Low_complexity Low_complexity 1 138 0 951 156 0 36 chr2 31316522 31316689 -221939894 - MER3 DNA MER1_type -27 182 22 509 278 81 56 chr2 31317168 31317402 -221939181 - MIR SINE MIR -21 241 2 218 375 29 10 chr2 31317685 31317789 -221938794 - MER91A DNA MER1_type -2 194 89 218 350 88 57 chr2 31318098 31318395 -221938188 + L2 LINE L2 2949 3254 -18 318 293 17 35 chr2 31318426 31318542 -221938041 + MIR SINE MIR 124 237 -25 21 0 0 0 chr2 31318742 31318763 -221937820 + AT_rich Low_complexity Low_complexity 1 21 0 231 88 0 0 chr2 31319026 31319060 -221937523 + (TA)n Simple_repeat Simple_repeat 1 34 0 565 203 68 8 chr2 31319060 31319169 -221937414 - FLAM_C SINE Alu -183 119 1 26 0 0 0 chr2 31319662 31319688 -221936895 + AT_rich Low_complexity Low_complexity 1 26 0 1853 82 4 0 chr2 31319712 31319943 -221936640 - AluSx SINE Alu -80 232 1 2333 74 7 3 chr2 31320581 31320879 -221935704 - AluSc SINE Alu -9 300 2 23 0 0 0 chr2 31320917 31320940 -221935643 + AT_rich Low_complexity Low_complexity 1 23 0 351 255 150 13 chr2 31321463 31321616 -221934967 + MIR SINE MIR 59 232 -30 461 301 26 13 chr2 31322889 31323045 -221933538 + MLT1L LTR MaLR 144 301 -314 1575 193 50 34 chr2 31323936 31324319 -221932264 + MLT1B LTR MaLR 1 389 -1 308 302 70 8 chr2 31324553 31324682 -221931901 - L1ME LINE L1 -502 5619 5483 2405 87 0 0 chr2 31324710 31325009 -221931574 - AluSq SINE Alu -14 299 1 622 294 128 64 chr2 31325187 31326338 -221930245 - L1ME LINE L1 -768 5378 4155 23 0 0 0 chr2 31327356 31327379 -221929204 + AT_rich Low_complexity Low_complexity 1 23 0 636 286 117 40 chr2 31327396 31327791 -221928792 + L1ME LINE L1 2877 3301 -2845 263 213 16 0 chr2 31327810 31327871 -221928712 + L1MD2 LINE L1 6096 6157 -202 205 194 0 0 chr2 31328192 31328228 -221928355 - MIR SINE MIR -13 249 214 * 263 259 69 35 chr2 31328222 31328338 -221928245 - L2 LINE L2 -2 3270 3151 222 217 301 12 chr2 31328360 31328443 -221928140 - MIR SINE MIR -31 177 71 188 245 75 19 chr2 31328497 31328550 -221928033 + MIR SINE MIR 6 61 -201 16336 127 101 8 chr2 31328860 31330930 -221925653 - L1PBa LINE L1 -2818 4044 2168 2415 82 0 3 chr2 31330930 31331236 -221925347 + AluY SINE Alu 1 305 -6 16336 127 101 8 chr2 31331236 31332858 -221923725 - L1PBa LINE L1 -4694 2168 3 743 173 6 39 chr2 31332865 31333021 -221923562 - MLT1A1 LTR MaLR -214 151 1 457 232 94 29 chr2 31333163 31333301 -221923282 + MLT1C LTR MaLR 6 152 -315 805 264 63 17 chr2 31333327 31333566 -221923017 + MLT1C LTR MaLR 218 467 0 394 259 75 34 chr2 31333875 31334022 -221922561 - MER5A DNA MER1_type 0 189 37 195 354 20 40 chr2 31334108 31334207 -221922376 + MIR SINE MIR 14 110 -152 28 0 0 0 chr2 31334258 31334286 -221922297 + AT_rich Low_complexity Low_complexity 1 28 0 2196 194 95 27 chr2 31335338 31335563 -221921020 + L1ME LINE L1 4120 4328 -1818 1302 84 68 0 chr2 31335563 31335753 -221920830 - L1PA14 LINE L1 -1 6160 5958 2196 194 95 27 chr2 31335753 31336202 -221920381 + L1ME LINE L1 4328 4840 -1306 * 3107 228 75 18 chr2 31336201 31337249 -221919334 + L1ME1 LINE L1 5055 6162 -4 3671 265 155 22 chr2 31338725 31339843 -221916740 + L2 LINE L2 1217 2601 -713 8187 55 1 0 chr2 31339843 31340808 -221915775 + LTR5 LTR ERVK 1 966 -3 3671 265 155 22 chr2 31340808 31341243 -221915340 + L2 LINE L2 2601 2977 -337 197 339 24 94 chr2 31344372 31344499 -221912084 - L2 LINE L2 -44 3228 3111 302 299 187 23 chr2 31344744 31344958 -221911625 + L1ME LINE L1 4809 5057 -1089 496 345 20 12 chr2 31345268 31345458 -221911125 + L1ME LINE L1 5452 5639 -523 6297 113 123 18 chr2 31345458 31345967 -221910616 - Tigger3b DNA MER2_type -1797 1231 777 1858 107 76 0 chr2 31345967 31346229 -221910354 - AluSx SINE Alu -15 297 16 6297 113 123 18 chr2 31346229 31346382 -221910201 - Tigger3b DNA MER2_type -2251 777 641 369 0 0 0 chr2 31346382 31346423 -221910160 + (CA)n Simple_repeat Simple_repeat 2 42 0 6297 113 123 18 chr2 31346423 31346873 -221909710 - Tigger3b DNA MER2_type -2387 641 1 496 345 20 12 chr2 31346873 31346928 -221909655 + L1ME LINE L1 5639 5699 -463 1450 64 0 6 chr2 31346933 31347106 -221909477 + AluY SINE Alu 1 172 -139 6121 114 10 2 chr2 31347106 31348228 -221908355 - L1PA8A LINE L1 -562 5569 4442 1439 122 0 80 chr2 31348228 31348491 -221908092 + MER1B DNA MER1_type 98 339 0 217 195 0 0 chr2 31349260 31349301 -221907282 - L3 LINE CR1 -23 1554 1514 322 302 47 59 chr2 31349335 31349504 -221907079 - L3 LINE CR1 -156 1421 1255 667 37 0 0 chr2 31349585 31349667 -221906916 - AluSc SINE Alu -7 302 221 1005 179 115 8 chr2 31349667 31349901 -221906682 + MER58B DNA MER1_type 77 335 -6 262 259 0 0 chr2 31349928 31349986 -221906597 - L3 LINE CR1 -326 1251 1194 2085 242 122 28 chr2 31350184 31350960 -221905623 - HAL1 LINE L1 -302 2205 1357 361 333 94 28 chr2 31351124 31351337 -221905246 - MIR SINE MIR -25 237 11 216 130 0 0 chr2 31352361 31352407 -221904176 + (TA)n Simple_repeat Simple_repeat 1 46 0 2562 229 27 13 chr2 31353012 31353688 -221902895 + L1PA10 LINE L1 1180 1864 -4282 1878 144 14 22 chr2 31353699 31354059 -221902524 - L1P LINE L1 -2963 3183 2827 20604 125 23 12 chr2 31354073 31354981 -221901602 + L1PA10 LINE L1 1875 2771 -3397 2200 112 6 6 chr2 31354981 31355293 -221901290 + AluSx SINE Alu 1 312 0 20604 125 23 12 chr2 31355293 31358618 -221897965 + L1PA10 LINE L1 2771 6157 -11 1011 129 0 0 chr2 31360322 31360462 -221896121 - AluJb SINE Alu -13 299 160 1384 156 8 0 chr2 31360619 31360863 -221895720 + L1MA4 LINE L1 4559 4804 -1342 3084 148 56 21 chr2 31360863 31361468 -221895115 + L1MA4 LINE L1 5663 6291 -9 1305 154 5 19 chr2 31361768 31361982 -221894601 - AluJb SINE Alu -20 292 82 402 321 153 0 chr2 31362156 31362287 -221894296 - L2 LINE L2 0 3272 3122 297 317 97 41 chr2 31362504 31362649 -221893934 + L2 LINE L2 3114 3266 -6 245 259 139 28 chr2 31362898 31363006 -221893577 - MIR SINE MIR -13 249 130 209 33 33 0 chr2 31363713 31363743 -221892840 + (TA)n Simple_repeat Simple_repeat 1 31 0 2153 104 3 44 chr2 31365362 31365678 -221890905 + AluSp SINE Alu 1 303 -10 225 377 0 0 chr2 31367014 31367083 -221889500 - L3b LINE CR1 -3 1580 1512 231 356 100 21 chr2 31367097 31367378 -221889205 - L2 LINE L2 -1298 2016 1714 1235 199 106 73 chr2 31367670 31367999 -221888584 + MLT1C LTR MaLR 59 405 -62 1987 65 52 14 chr2 31367999 31368290 -221888293 - AluY SINE Alu -9 302 1 1235 199 106 73 chr2 31368290 31368356 -221888227 + MLT1C LTR MaLR 405 467 0 189 0 0 0 chr2 31369292 31369313 -221887270 + (T)n Simple_repeat Simple_repeat 1 21 0 1620 117 21 0 chr2 31370118 31370357 -221886226 + L1PA8A LINE L1 5886 6129 -2 205 216 0 39 chr2 31372038 31372089 -221884494 + G-rich Low_complexity Low_complexity 2 50 0 189 200 0 44 chr2 31372135 31372180 -221884403 - L2 LINE L2 -94 3219 3177 3568 146 30 6 chr2 31372215 31372839 -221883744 - L1MA5 LINE L1 -3 6297 5659 190 312 194 24 chr2 31373541 31373871 -221882712 + L2 LINE L2 1565 1950 -1364 184 75 25 50 chr2 31375223 31375263 -221881320 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 207 0 0 0 chr2 31376451 31376474 -221880109 + (GAA)n Simple_repeat Simple_repeat 2 24 0 472 210 55 105 chr2 31377041 31377199 -221879384 + LTR50 LTR ERVL 570 714 -81 2130 110 3 0 chr2 31377199 31377491 -221879092 - AluSq SINE Alu -20 293 1 472 210 55 105 chr2 31377491 31377570 -221879013 + LTR50 LTR ERVL 714 795 0 1958 126 27 0 chr2 31377621 31377915 -221878668 - AluSx SINE Alu -10 302 1 1148 50 0 0 chr2 31378272 31378413 -221878170 + AluY SINE Alu 153 293 -18 180 313 0 30 chr2 31379067 31379134 -221877449 - MIR SINE MIR -110 98 34 378 0 0 0 chr2 31379291 31379333 -221877250 + (T)n Simple_repeat Simple_repeat 1 42 0 558 246 64 23 chr2 31379609 31379780 -221876803 - MIR3 SINE MIR -28 180 3 209 319 69 14 chr2 31379819 31379891 -221876692 - L2 LINE L2 0 3272 3197 2194 86 6 16 chr2 31380734 31381048 -221875535 + AluSq SINE Alu 1 311 -2 279 321 152 18 chr2 31381655 31381820 -221874763 + MER5A DNA MER1_type 1 187 -2 252 154 11 165 chr2 31382568 31382659 -221873924 + LTR33A LTR ERVL 447 523 0 19202 50 6 0 chr2 31382922 31386097 -221870486 - L1PA5 LINE L1 -1 6153 2967 1413 257 137 25 chr2 31388860 31389544 -221867039 - HAL1 LINE L1 -27 2480 1720 321 281 53 35 chr2 31389907 31390021 -221866562 - MER91B DNA MER1_type 0 190 75 5130 197 45 12 chr2 31391186 31393330 -221863253 + L1MB8 LINE L1 3958 6177 -1 434 351 52 30 chr2 31393469 31393871 -221862712 - L2 LINE L2 -353 2961 2551 232 314 151 21 chr2 31393877 31394116 -221862467 - L2 LINE L2 -1517 1797 1528 498 284 103 17 chr2 31394889 31395121 -221861462 + L3 LINE CR1 1213 1464 -113 336 302 74 7 chr2 31395190 31395339 -221861244 - MIR3 SINE MIR -15 193 35 709 128 120 8 chr2 31398474 31398607 -221857976 + MER5A DNA MER1_type 2 149 -40 1031 256 20 16 chr2 31399803 31400049 -221856534 + MIR SINE MIR 7 253 -9 204 297 108 47 chr2 31400177 31400325 -221856258 - MIR3 SINE MIR -45 163 7 218 287 129 0 chr2 31400490 31400591 -221855992 - L2 LINE L2 -1 3271 3158 190 315 188 13 chr2 31401022 31401171 -221855412 - L2 LINE L2 -488 2826 2652 218 242 47 94 chr2 31402142 31402270 -221854313 - L2 LINE L2 -509 2805 2684 421 280 105 17 chr2 31402758 31402944 -221853639 + MIR SINE MIR 2 215 -47 360 0 0 0 chr2 31402944 31402984 -221853599 + (CA)n Simple_repeat Simple_repeat 2 41 0 421 280 105 17 chr2 31402984 31403036 -221853547 + MIR SINE MIR 215 261 -1 308 127 18 0 chr2 31403836 31403891 -221852692 + (TG)n Simple_repeat Simple_repeat 1 56 0 2188 110 0 0 chr2 31405061 31405369 -221851214 - AluSg SINE Alu -1 309 2 399 299 108 0 chr2 31405512 31405669 -221850914 + MER91A DNA MER1_type 22 195 -1 298 283 97 0 chr2 31405904 31406017 -221850566 - L2 LINE L2 -5 3267 3144 366 271 83 14 chr2 31407602 31407746 -221848837 + MER117 DNA MER1_type 6 159 -38 198 236 281 0 chr2 31408050 31408139 -221848444 + L2 LINE L2 3004 3117 -155 2061 123 13 0 chr2 31410872 31411174 -221845409 - AluSx SINE Alu -6 306 1 263 314 86 0 chr2 31412172 31412277 -221844306 - MIR SINE MIR -50 212 99 261 231 66 99 chr2 31413962 31414083 -221842500 + MIR SINE MIR 32 148 -60 1225 162 44 9 chr2 31414135 31414363 -221842220 + MER46A DNA MER2_type 1 236 0 400 220 110 28 chr2 31414614 31414723 -221841860 + MIR SINE MIR 31 148 -60 3822 80 19 13 chr2 31414915 31415443 -221841140 + L1PA14 LINE L1 5622 6152 -9 544 245 138 0 chr2 31415647 31415806 -221840777 - MER5A DNA MER1_type 0 189 9 181 300 130 30 chr2 31416338 31416438 -221840145 + MIR SINE MIR 43 152 -56 236 308 64 30 chr2 31417562 31417717 -221838866 - MIR SINE MIR -76 132 3 437 352 139 27 chr2 31419488 31420409 -221836174 + L2 LINE L2 2211 3243 -29 194 268 29 138 chr2 31422721 31422859 -221833724 + L2 LINE L2 3143 3265 -7 221 95 0 48 chr2 31423723 31423765 -221832818 + (TCCC)n Simple_repeat Simple_repeat 1 40 0 239 355 50 14 chr2 31474028 31474169 -221782414 - MIR SINE MIR -114 148 3 267 79 0 0 chr2 31475170 31475208 -221781375 + (GA)n Simple_repeat Simple_repeat 1 38 0 249 279 72 27 chr2 31475210 31475321 -221781262 + MIR SINE MIR 16 131 -77 180 356 0 61 chr2 31475723 31475838 -221780745 - L2 LINE L2 -231 3041 2934 420 225 108 36 chr2 31475849 31475960 -221780623 - L2 LINE L2 -16 3256 3138 207 339 172 42 chr2 31476010 31477014 -221779569 - L2 LINE L2 -423 2891 1757 466 368 73 42 chr2 31477047 31477498 -221779085 - L2 LINE L2 0 3272 2808 656 284 177 36 chr2 31477819 31478378 -221778205 + L1MB7 LINE L1 3145 3782 -2364 3991 206 66 15 chr2 31478380 31480127 -221776456 + L1MB7 LINE L1 4334 6168 -16 657 279 110 62 chr2 31480219 31480908 -221775675 + L1ME4a LINE L1 5255 5964 -157 232 285 98 65 chr2 31480955 31481078 -221775505 - L2 LINE L2 -613 2701 2575 310 265 0 12 chr2 31481764 31481847 -221774736 - MIR SINE MIR -94 168 87 202 346 64 0 chr2 31481981 31482059 -221774524 - L2 LINE L2 -1 3271 3189 220 286 78 0 chr2 31482069 31482146 -221774437 - L2 LINE L2 -53 3219 3137 1015 188 12 0 chr2 31482209 31482379 -221774204 - AluJo SINE Alu -19 293 122 1547 111 9 9 chr2 31482429 31482655 -221773928 + MSTA LTR MaLR 1 226 -202 9220 165 16 3 chr2 31482655 31484182 -221772401 + L1MA3 LINE L1 1181 2727 -4838 741 82 0 0 chr2 31484184 31484282 -221772301 + L1PA5 LINE L1 1 98 -6048 * 16069 61 5 2 chr2 31484280 31486347 -221770236 + L1PA5 LINE L1 847 2918 -3228 1677 52 9 5 chr2 31486347 31486553 -221770030 + L1PA4 LINE L1 5943 6154 -1 * 21245 39 3 1 chr2 31486542 31489759 -221766824 + L1PA5 LINE L1 2913 6139 -15 14125 152 22 27 chr2 31489787 31492571 -221764012 + L1MA3 LINE L1 4004 6777 -947 2174 116 0 26 chr2 31492571 31492881 -221763702 - AluSx SINE Alu -7 305 4 14125 152 22 27 chr2 31492881 31493825 -221762758 + L1MA3 LINE L1 6777 7724 0 2091 136 3 0 chr2 31493924 31494218 -221762365 - AluSx SINE Alu -17 295 1 2513 46 0 26 chr2 31494224 31494528 -221762055 - AluY SINE Alu -15 296 1 352 234 200 88 chr2 31495646 31496125 -221760458 - MLT1H LTR MaLR -16 533 1 23 0 0 0 chr2 31496748 31496771 -221759812 + AT_rich Low_complexity Low_complexity 1 23 0 559 251 152 0 chr2 31496925 31497096 -221759487 + MIR SINE MIR 25 221 -41 207 0 0 0 chr2 31497864 31497887 -221758696 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1506 203 0 31 chr2 31497889 31498179 -221758404 - AluJb SINE Alu -31 281 1 2282 84 3 14 chr2 31499176 31499472 -221757111 + AluSq SINE Alu 1 293 -20 183 237 0 0 chr2 31499538 31499576 -221757007 + MIR SINE MIR 107 144 -64 191 279 98 49 chr2 31499654 31499776 -221756807 + MIR SINE MIR 125 252 -10 187 304 0 0 chr2 31499794 31499850 -221756733 + MIR3 SINE MIR 151 206 -2 657 242 0 0 chr2 31500399 31500531 -221756052 - MER3 DNA MER1_type -77 132 1 218 264 100 45 chr2 31500649 31500759 -221755824 + MIR SINE MIR 26 141 -67 251 241 79 44 chr2 31501640 31501761 -221754822 + MIR SINE MIR 22 144 -64 312 291 133 33 chr2 31502047 31502198 -221754385 - L3 LINE CR1 -5 1572 1407 505 204 19 0 chr2 31502374 31502482 -221754101 + MER117 DNA MER1_type 36 145 -52 350 301 59 36 chr2 31502600 31502819 -221753764 + MLT1K LTR MaLR 7 230 -358 480 282 98 39 chr2 31502933 31503167 -221753416 + MLT1L LTR MaLR 345 592 -23 270 311 149 6 chr2 31503181 31503342 -221753241 - L3 LINE CR1 -263 1314 1131 372 141 0 6 chr2 31503960 31504027 -221752556 + AluSq SINE Alu 1 55 -245 2881 3 0 6 chr2 31504027 31504340 -221752243 + AluYa5 SINE Alu 1 311 0 1814 132 8 0 chr2 31504340 31504605 -221751978 + AluSq SINE Alu 44 311 -2 463 101 25 0 chr2 31504605 31504684 -221751899 + GA-rich Low_complexity Low_complexity 1 81 0 4293 148 30 26 chr2 31504882 31505645 -221750938 - L1MB4 LINE L1 0 6180 5415 269 302 168 13 chr2 31505889 31506038 -221750545 + MIR SINE MIR 84 255 -7 466 323 18 6 chr2 31506437 31506604 -221749979 - MIR SINE MIR -61 201 33 2558 160 38 7 chr2 31507570 31507989 -221748594 + MSTB1 LTR MaLR 1 432 0 373 258 57 16 chr2 31508110 31508234 -221748349 + MIR SINE MIR 20 148 -114 979 251 184 0 chr2 31508250 31508657 -221747926 + L2 LINE L2 2608 3072 -241 994 160 105 6 chr2 31508658 31508839 -221747744 + AluJo SINE Alu 1 199 -113 386 264 106 0 chr2 31508844 31508987 -221747596 - L1M4 LINE L1 -375 5680 5536 1934 221 70 10 chr2 31509268 31509881 -221746702 - L1M4 LINE L1 -2099 3981 3299 * 4242 116 4 4 chr2 31509852 31510907 -221745676 - L1P4 LINE L1 -397 5705 4653 * 10264 127 6 0 chr2 31510903 31512458 -221744125 + L1P LINE L1 2988 4552 -1594 2094 276 53 49 chr2 31512474 31514075 -221742508 - L1ME LINE L1 -4596 1665 20 280 323 219 0 chr2 31514547 31514739 -221741844 + MIR SINE MIR 20 253 -9 616 354 97 38 chr2 31517367 31518107 -221738476 + L2 LINE L2 1881 2664 -650 468 214 50 50 chr2 31518445 31518604 -221737979 - L1MC5 LINE L1 -47 7914 7756 209 267 0 0 chr2 31519471 31519516 -221737067 + G-rich Low_complexity Low_complexity 2 46 0 397 273 118 25 chr2 31519673 31519834 -221736749 + MER69A DNA AcHobo 1 176 -1 212 296 0 14 chr2 31519850 31519921 -221736662 + CT-rich Low_complexity Low_complexity 3 72 0 3977 167 64 25 chr2 31522275 31523440 -221733143 - L1MB5 LINE L1 -1 6173 4960 622 276 43 27 chr2 31523818 31524075 -221732508 + MIR SINE MIR 2 262 0 201 250 210 89 chr2 31525079 31525203 -221731380 - MIR SINE MIR -70 192 54 378 328 53 10 chr2 31525866 31526069 -221730514 + MIR SINE MIR 38 247 -15 231 277 0 46 chr2 31526720 31526785 -221729798 + MER5A DNA MER1_type 26 87 -102 * 313 206 0 41 chr2 31526732 31526805 -221729778 - MER5A DNA MER1_type -24 165 96 399 324 29 42 chr2 31527473 31527785 -221728798 + HAL1 LINE L1 619 926 -1581 248 284 35 28 chr2 31527891 31528032 -221728551 + HAL1 LINE L1 1405 1546 -961 1637 208 96 17 chr2 31528038 31528457 -221728126 + LTR40b LTR ERVL 11 462 0 976 278 112 30 chr2 31528458 31529254 -221727329 + HAL1 LINE L1 1543 2403 -104 350 297 69 47 chr2 31529608 31529840 -221726743 + MIR SINE MIR 20 256 -6 237 277 0 0 chr2 31531401 31531448 -221725135 + L2 LINE L2 3215 3261 -11 480 322 60 6 chr2 31531520 31531703 -221724880 + MIR SINE MIR 60 252 -10 590 291 50 59 chr2 31531907 31532168 -221724415 + MIR SINE MIR 7 257 -5 1698 176 78 23 chr2 31533524 31533870 -221722713 + MLT1A1 LTR MaLR 1 365 0 570 314 28 8 chr2 31533949 31534201 -221722382 - MIR SINE MIR -4 258 2 185 240 146 31 chr2 31534583 31534679 -221721904 - L3 LINE CR1 -545 1032 926 215 253 67 40 chr2 31536059 31536134 -221720449 - L2 LINE L2 -2 3311 3235 325 284 53 49 chr2 31536573 31536798 -221719785 + L1MEd LINE L1 502 727 -5392 321 265 20 10 chr2 31536961 31537063 -221719520 + (CATATA)n Simple_repeat Simple_repeat 3 105 0 197 206 0 32 chr2 31537077 31537140 -221719443 + (TATATG)n Simple_repeat Simple_repeat 6 66 0 341 285 32 49 chr2 31537144 31537267 -221719316 + L1MC4 LINE L1 6588 6708 -1334 1379 251 165 35 chr2 31538825 31539346 -221717237 + MLT1E LTR MaLR 1 589 -4 186 291 36 0 chr2 31539617 31539672 -221716911 + MER5A DNA MER1_type 69 125 -64 41477 34 22 1 chr2 31539739 31545764 -221710819 + L1PA2 LINE L1 2 6155 0 447 284 81 7 chr2 31545775 31545923 -221710660 - MIR3 SINE MIR -48 160 2 421 308 24 1 chr2 31547151 31547295 -221709288 - MIR SINE MIR -56 152 36 348 229 30 38 chr2 31549322 31549453 -221707130 + L1MC5 LINE L1 7796 7925 -36 189 0 0 0 chr2 31549598 31549619 -221706964 + (CTG)n Simple_repeat Simple_repeat 2 22 0 832 229 84 0 chr2 31549619 31549798 -221706785 - MIR SINE MIR 0 262 69 632 281 94 0 chr2 31550216 31550408 -221706175 - MER115 DNA AcHobo -333 360 151 5330 62 8 5 chr2 31551287 31551951 -221704632 + PABL_B LTR ERV1 1 666 -1 2401 113 0 0 chr2 31552337 31552646 -221703937 + AluSg SINE Alu 1 309 -1 731 228 31 5 chr2 31552756 31552949 -221703634 + MER20 DNA MER1_type 21 218 -1 313 281 211 4 chr2 31553177 31553348 -221703235 - MIR SINE MIR -35 227 13 609 310 90 0 chr2 31553803 31554003 -221702580 + MIR SINE MIR 28 245 -17 272 213 33 49 chr2 31554164 31554347 -221702236 + (CAGG)n Simple_repeat Simple_repeat 1 180 0 226 313 49 6 chr2 31554288 31554451 -221702132 + (GGGTG)n Simple_repeat Simple_repeat 1 170 0 * 221 267 85 115 chr2 31555697 31555862 -221700721 + MIR SINE MIR 20 179 -83 318 87 0 0 chr2 31556171 31556217 -221700366 + (CA)n Simple_repeat Simple_repeat 2 47 0 852 198 35 70 chr2 31557280 31557507 -221699076 + MER20 DNA MER1_type 1 219 0 231 343 79 30 chr2 31557965 31558230 -221698353 + L2 LINE L2 2807 3084 -188 2381 87 0 3 chr2 31558597 31558895 -221697688 - AluSq SINE Alu -7 306 10 322 245 41 82 chr2 31560813 31560911 -221695672 - L2 LINE L2 0 3313 3220 328 335 90 16 chr2 31561244 31561489 -221695094 - L2 LINE L2 -498 2816 2554 200 346 12 0 chr2 31561663 31561744 -221694839 + L2 LINE L2 3189 3270 -43 648 321 133 51 chr2 31561811 31562640 -221693943 - L2 LINE L2 -810 2504 1608 619 217 34 51 chr2 31562670 31562845 -221693738 + MER5B DNA MER1_type 3 174 -4 294 262 326 7 chr2 31562860 31563001 -221693582 + MER5A DNA MER1_type 4 189 0 202 321 151 61 chr2 31563085 31563696 -221692887 - L2 LINE L2 -1749 1565 900 387 279 91 36 chr2 31563956 31564121 -221692462 + MIR SINE MIR 32 205 -57 32 0 0 0 chr2 31564132 31564164 -221692419 + AT_rich Low_complexity Low_complexity 1 32 0 2344 87 0 0 chr2 31564168 31564455 -221692128 - AluSg SINE Alu -23 287 1 1983 117 36 42 chr2 31565249 31565607 -221690976 - MER46B DNA MER2_type 0 236 6 206 208 94 0 chr2 31567879 31567932 -221688651 + MIR SINE MIR 118 175 -87 456 313 85 11 chr2 31568026 31568202 -221688381 + L3 LINE CR1 1207 1395 -182 692 244 41 0 chr2 31568641 31568813 -221687770 - MER97c DNA MER1_type? -911 179 1 213 312 33 23 chr2 31569287 31569417 -221687166 + MIR SINE MIR 58 189 -64 187 227 91 45 chr2 31572801 31572867 -221683716 - MIR SINE MIR -50 212 144 1976 197 87 20 chr2 31572900 31573392 -221683191 - MLT1E2 LTR MaLR -99 527 3 279 264 110 0 chr2 31573402 31573493 -221683090 - MIR SINE MIR -116 146 46 257 50 0 25 chr2 31573830 31573870 -221682713 + (CA)n Simple_repeat Simple_repeat 2 40 0 234 0 0 0 chr2 31573900 31573926 -221682657 + (CA)n Simple_repeat Simple_repeat 2 27 0 216 0 0 0 chr2 31573925 31573949 -221682634 + (TC)n Simple_repeat Simple_repeat 2 25 0 * 395 363 77 37 chr2 31575885 31576158 -221680425 + L3 LINE CR1 1238 1521 -56 470 244 17 8 chr2 31576783 31576902 -221679681 - L2 LINE L2 -5 3308 3189 1824 154 46 44 chr2 31578356 31578745 -221677838 + MLT1B LTR MaLR 1 390 0 209 238 48 67 chr2 31578918 31579023 -221677560 - MIR SINE MIR -88 120 18 300 326 86 23 chr2 31581443 31581618 -221674965 + MIR3 SINE MIR 20 205 -3 2979 99 0 14 chr2 31581793 31582227 -221674356 + MSTA LTR MaLR 1 428 0 373 326 182 24 chr2 31582328 31582911 -221673672 + L2 LINE L2 2185 2859 -455 2576 172 65 19 chr2 31583827 31584349 -221672234 + MER77 LTR ERV1 54 599 -6 181 293 147 0 chr2 31585270 31585345 -221671238 - L2 LINE L2 -10 3262 3177 288 286 44 30 chr2 31585465 31585620 -221670963 + MIR3 SINE MIR 7 146 -62 2239 180 19 90 chr2 31586535 31587169 -221669414 + L1MB5 LINE L1 5572 6160 -14 235 177 32 0 chr2 31587170 31587232 -221669351 + (CA)n Simple_repeat Simple_repeat 2 65 0 492 215 96 60 chr2 31587648 31587816 -221668767 + L1ME4a LINE L1 5851 6032 -89 4245 12 0 0 chr2 31587816 31588314 -221668269 + L1PA2 LINE L1 5658 6155 0 492 215 96 60 chr2 31588314 31588396 -221668187 + L1ME4a LINE L1 6032 6110 -11 2340 109 0 6 chr2 31588837 31589148 -221667435 - AluSc SINE Alu 0 309 1 720 151 0 0 chr2 31589891 31590010 -221666573 - AluSp/q SINE Alu -3 310 192 22 35 0 0 chr2 31590558 31590587 -221665996 + AT_rich Low_complexity Low_complexity 1 29 0 227 286 143 0 chr2 31590957 31591034 -221665549 + MIR SINE MIR 59 146 -116 23 0 0 0 chr2 31591871 31591894 -221664689 + AT_rich Low_complexity Low_complexity 1 23 0 971 101 0 20 chr2 31591895 31592044 -221664539 - L1MA2 LINE L1 -1 6303 6158 2121 138 7 0 chr2 31592047 31592344 -221664239 - AluSx SINE Alu -10 302 4 833 211 94 19 chr2 31592734 31592947 -221663636 - MIR SINE MIR -32 230 2 209 342 159 14 chr2 31594172 31594467 -221662116 + L2 LINE L2 2394 2731 -583 187 300 33 56 chr2 31594684 31594774 -221661809 + L2 LINE L2 3009 3096 -176 192 312 43 21 chr2 31594871 31594964 -221661619 + L2 LINE L2 3210 3304 -9 * 236 250 0 0 chr2 31594939 31594987 -221661596 - L2 LINE L2 -4 3309 3262 537 295 31 26 chr2 31595029 31595222 -221661361 + MIR SINE MIR 69 262 0 207 272 6 139 chr2 31596637 31596810 -221659773 + MIR SINE MIR 63 212 -50 305 254 18 79 chr2 31596909 31597023 -221659560 + MIR SINE MIR 30 136 -126 187 218 0 55 chr2 31597035 31597090 -221659493 + L2 LINE L2 3219 3270 -2 849 211 0 57 chr2 31597121 31597221 -221659362 + MER5A DNA MER1_type 7 92 -97 2207 112 0 35 chr2 31597221 31597533 -221659050 - AluSq SINE Alu -12 301 1 849 211 0 57 chr2 31597533 31597626 -221658957 + MER5A DNA MER1_type 92 189 0 739 263 69 5 chr2 31597690 31597907 -221658676 - MIR SINE MIR -24 238 8 357 214 20 31 chr2 31599230 31599328 -221657255 - MIR SINE MIR -146 116 20 456 274 82 0 chr2 31599353 31599488 -221657095 - MIR SINE MIR -14 248 103 292 298 50 16 chr2 31600715 31600836 -221655747 + MIR SINE MIR 20 144 -118 497 253 106 0 chr2 31601470 31601640 -221654943 + MIR SINE MIR 50 237 -25 406 373 39 14 chr2 31603441 31603720 -221652863 + L2 LINE L2 2926 3211 -61 2125 203 52 29 chr2 31603827 31604349 -221652234 + MLT1F LTR MaLR 1 534 -8 202 314 14 0 chr2 31605282 31605352 -221651231 + MIR SINE MIR 69 139 -69 257 269 92 64 chr2 31605489 31605630 -221650953 + MIR SINE MIR 92 236 -26 388 309 148 0 chr2 31605816 31605978 -221650605 + MIR SINE MIR 20 205 -57 269 297 101 29 chr2 31606418 31606556 -221650027 - MIR3 SINE MIR -56 152 5 441 259 192 5 chr2 31607984 31608177 -221648406 - MIR SINE MIR -6 256 28 188 304 249 28 chr2 31609713 31609930 -221646653 + L2 LINE L2 2442 2706 -608 462 330 99 54 chr2 31609988 31610431 -221646152 + L2 LINE L2 2809 3271 -1 1258 214 37 3 chr2 31610885 31611206 -221645377 + MER33 DNA MER1_type 1 324 0 345 100 0 0 chr2 31612132 31612182 -221644401 + (TG)n Simple_repeat Simple_repeat 1 50 0 202 354 281 0 chr2 31612353 31612531 -221644052 - MIR SINE MIR 0 262 35 2266 117 0 3 chr2 31612624 31612931 -221643652 - AluSx SINE Alu -6 306 1 222 338 158 0 chr2 31613936 31614075 -221642508 + MIR SINE MIR 92 252 -10 205 308 108 0 chr2 31614266 31614386 -221642197 - L2 LINE L2 -4 3268 3136 523 269 129 0 chr2 31615982 31616153 -221640430 - MIR SINE MIR -5 257 65 1657 119 70 0 chr2 31616340 31616584 -221639999 + AluSq SINE Alu 1 261 -52 287 282 0 24 chr2 31617319 31617404 -221639179 - MIR3 SINE MIR -22 186 104 1765 275 121 15 chr2 31617632 31618362 -221638221 + L1ME3A LINE L1 5359 6165 -5 366 80 0 0 chr2 31619319 31619369 -221637214 + (CA)n Simple_repeat Simple_repeat 2 51 0 288 365 9 0 chr2 31619438 31619545 -221637038 + MIR SINE MIR 28 135 -73 286 322 144 0 chr2 31620553 31620671 -221635912 + L2 LINE L2 3133 3267 -5 282 116 0 0 chr2 31620672 31620715 -221635868 + (TGAA)n Simple_repeat Simple_repeat 2 44 0 462 88 0 0 chr2 31622136 31622204 -221634379 - MADE1 DNA Mariner -12 68 1 276 292 45 0 chr2 31622577 31622666 -221633917 - MIR3 SINE MIR -34 174 82 257 106 0 21 chr2 31623240 31623287 -221633296 + (TCC)n Simple_repeat Simple_repeat 3 48 0 903 177 5 91 chr2 31624247 31624445 -221632138 - MER5A DNA MER1_type -2 187 7 580 189 0 0 chr2 31624462 31624564 -221632019 + MER5A DNA MER1_type 4 105 -84 208 310 0 14 chr2 31624680 31624751 -221631832 - MER5B DNA MER1_type -102 76 7 343 289 0 22 chr2 31625104 31625194 -221631389 + L1MC4 LINE L1 6614 6701 -1341 200 158 18 0 chr2 31625198 31625255 -221631328 + (TA)n Simple_repeat Simple_repeat 2 59 0 646 262 34 48 chr2 31625258 31625464 -221631119 - MIR SINE MIR -58 204 2 888 177 52 10 chr2 31625604 31625796 -221630787 + MER20 DNA MER1_type 20 219 0 291 309 12 0 chr2 31627146 31627227 -221629356 - MIR3 SINE MIR -6 202 121 832 311 26 0 chr2 31628737 31628965 -221627618 - MIR SINE MIR -8 254 21 297 318 40 32 chr2 31629259 31629385 -221627198 - MIR3 SINE MIR -46 162 36 191 339 97 24 chr2 31630498 31630622 -221625961 - L2 LINE L2 -213 3059 2927 246 135 0 0 chr2 31630632 31630669 -221625914 - MLT2C2 LTR ERVL 0 464 428 423 0 0 0 chr2 31630671 31630718 -221625865 + (TG)n Simple_repeat Simple_repeat 2 48 0 1735 133 10 24 chr2 31630747 31631040 -221625543 + MER7A DNA MER2_type 14 300 -46 1829 153 17 24 chr2 31631040 31631334 -221625249 - AluJo SINE Alu -18 294 3 1216 183 256 38 chr2 31631361 31631755 -221624828 - MLT2B1 LTR ERVL -40 480 1 22 0 0 0 chr2 31632505 31632527 -221624056 + AT_rich Low_complexity Low_complexity 1 22 0 261 290 35 10 chr2 31632593 31632690 -221623893 - MIR SINE MIR -55 153 51 1671 106 166 15 chr2 31633231 31633562 -221623021 - L1MA7 LINE L1 0 6291 5911 550 149 116 0 chr2 31633544 31633665 -221622918 + L1MA7 LINE L1 5783 5917 -374 * 495 253 71 76 chr2 31634148 31634346 -221622237 - MIR SINE MIR -57 205 9 546 335 73 17 chr2 31634698 31634985 -221621598 - L3 LINE CR1 -53 1524 1222 190 279 0 0 chr2 31635234 31635277 -221621306 - MIR SINE MIR -2 260 218 1765 199 43 53 chr2 31635939 31635976 -221620607 - MLT2D LTR ERVL 0 414 378 351 0 0 0 chr2 31635976 31636015 -221620568 + (TG)n Simple_repeat Simple_repeat 2 40 0 1765 199 43 53 chr2 31636015 31636395 -221620188 - MLT2D LTR ERVL -36 378 1 418 209 55 27 chr2 31636452 31636562 -221620021 - MIR SINE MIR -74 188 76 596 253 58 67 chr2 31637040 31637352 -221619231 + L1MEd LINE L1 560 868 -5251 260 128 0 0 chr2 31637341 31637388 -221619195 + L1PB4 LINE L1 6108 6154 -2 * 311 303 50 76 chr2 31637546 31637687 -221618896 - MIR SINE MIR -50 212 76 2171 122 0 3 chr2 31637687 31637982 -221618601 + AluSx SINE Alu 1 294 -18 311 303 50 76 chr2 31637982 31638038 -221618545 - MIR SINE MIR -186 76 20 690 276 62 0 chr2 31641891 31642101 -221614482 - MIR SINE MIR -6 256 34 1740 162 3 40 chr2 31643641 31643937 -221612646 - AluJo SINE Alu -27 285 1 232 67 0 44 chr2 31644607 31644652 -221611931 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 1341 288 105 65 chr2 31644809 31645522 -221611061 + L2 LINE L2 1942 2625 -689 2130 134 0 7 chr2 31645522 31645828 -221610755 - AluSx SINE Alu -8 304 1 1341 288 105 65 chr2 31645828 31645858 -221610725 + L2 LINE L2 2625 2652 -662 2260 79 11 0 chr2 31645858 31645987 -221610596 + AluY SINE Alu 1 127 -184 180 0 0 0 chr2 31645987 31646007 -221610576 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 2260 79 11 0 chr2 31646007 31646157 -221610426 + AluY SINE Alu 127 283 -28 1341 288 105 65 chr2 31646157 31646402 -221610181 + L2 LINE L2 2652 2971 -343 337 262 76 69 chr2 31646604 31646838 -221609745 + MIR SINE MIR 16 248 -14 250 276 67 48 chr2 31646896 31647001 -221609582 + MIR SINE MIR 45 151 -57 218 183 0 141 chr2 31647733 31647804 -221608779 + L2 LINE L2 2757 2817 -497 203 263 17 17 chr2 31648265 31648383 -221608200 + A-rich Low_complexity Low_complexity 1 118 0 286 200 0 0 chr2 31648605 31648660 -221607923 + MIR SINE MIR 51 105 -103 1326 268 46 21 chr2 31648687 31649206 -221607377 + HAL1b LINE L1 86 617 -731 541 239 86 0 chr2 31649304 31649467 -221607116 + HAL1b LINE L1 625 801 -547 696 243 74 5 chr2 31649565 31649754 -221606829 + MIR SINE MIR 47 248 -14 551 203 62 23 chr2 31650177 31650305 -221606278 + MIR3 SINE MIR 39 171 -37 2326 110 0 7 chr2 31650548 31650857 -221605726 + AluSq SINE Alu 1 307 -6 1630 218 62 12 chr2 31651005 31651428 -221605155 + L1MC4a LINE L1 7141 7584 -224 1493 162 82 75 chr2 31651602 31651978 -221604605 - MLT1B LTR MaLR -11 379 1 459 240 320 23 chr2 31652058 31652408 -221604175 + LTR16A1 LTR ERVL 4 457 0 238 258 48 0 chr2 31652416 31652478 -221604105 + MIR SINE MIR 197 261 -1 249 271 201 22 chr2 31652479 31652670 -221603913 - MIR SINE MIR -25 237 4 22 0 0 0 chr2 31652974 31652996 -221603587 + AT_rich Low_complexity Low_complexity 1 22 0 1885 150 95 12 chr2 31653821 31654167 -221602416 - THE1C LTR MaLR 0 375 1 23 0 0 0 chr2 31654192 31654215 -221602368 + AT_rich Low_complexity Low_complexity 1 23 0 255 286 0 14 chr2 31654548 31654618 -221601965 - MIR SINE MIR -36 226 158 416 272 62 43 chr2 31655248 31655410 -221601173 + MIR SINE MIR 48 212 -50 886 198 5 77 chr2 31656797 31656832 -221599751 + MER58A DNA MER1_type 19 55 -2365 2329 118 0 3 chr2 31656832 31657146 -221599437 - AluSq SINE Alu 0 313 1 886 198 5 77 chr2 31657146 31657332 -221599251 + MER58A DNA MER1_type 55 224 0 351 328 12 57 chr2 31657336 31657514 -221599069 + MIR SINE MIR 16 187 -58 306 0 0 0 chr2 31658689 31658723 -221597860 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 2373 267 184 20 chr2 31658858 31660332 -221596251 + L2 LINE L2 1549 3268 -4 326 333 65 8 chr2 31660445 31660568 -221596015 + MIR3 SINE MIR 1 130 -78 526 313 101 10 chr2 31660664 31660862 -221595721 - MIR SINE MIR -40 222 7 1381 182 50 87 chr2 31661237 31661638 -221594945 - MLT2C1 LTR ERVL -11 386 1 423 273 129 0 chr2 31662177 31662316 -221594267 + MIR3 SINE MIR 50 206 -2 1998 136 51 0 chr2 31662690 31662985 -221593598 + AluSq SINE Alu 1 310 -3 288 0 0 0 chr2 31663427 31663459 -221593124 + (TG)n Simple_repeat Simple_repeat 1 32 0 352 321 66 29 chr2 31664630 31664767 -221591816 + MIR3 SINE MIR 17 158 -50 393 300 57 7 chr2 31669296 31669436 -221587147 + L2 LINE L2 2219 2365 -949 320 315 80 60 chr2 31669457 31669657 -221586926 - MIR SINE MIR -11 251 48 286 319 52 84 chr2 31669624 31669969 -221586614 + L2 LINE L2 2441 2774 -540 * 5613 236 78 40 chr2 31670072 31671033 -221585550 - L1M4c LINE L1 -2945 3699 2776 2777 102 37 5 chr2 31671033 31671094 -221585489 + L1PA13 LINE L1 5714 5772 -391 276 30 0 0 chr2 31671094 31671127 -221585456 + (TG)n Simple_repeat Simple_repeat 2 34 0 492 86 0 0 chr2 31671129 31671199 -221585384 + (CA)n Simple_repeat Simple_repeat 2 71 0 2777 102 37 5 chr2 31671199 31671565 -221585018 + L1PA13 LINE L1 5772 6158 -5 5613 236 78 40 chr2 31671565 31673606 -221582977 - L1M4c LINE L1 -3868 2776 815 180 0 0 0 chr2 31673606 31673626 -221582957 + (TA)n Simple_repeat Simple_repeat 2 21 0 2338 114 3 0 chr2 31673626 31673933 -221582650 - AluSx SINE Alu -3 309 2 5613 236 78 40 chr2 31673933 31674288 -221582295 - L1M4c LINE L1 -5829 815 475 2056 132 10 3 chr2 31674288 31674584 -221581999 - AluSx SINE Alu -14 298 1 5613 236 78 40 chr2 31674584 31674740 -221581843 - L1M4c LINE L1 -6169 475 14 343 208 198 0 chr2 31674897 31674998 -221581585 - MIR SINE MIR -68 194 74 207 252 61 102 chr2 31675057 31675204 -221581379 - L3b LINE CR1 -147 1436 1296 207 320 70 31 chr2 31676873 31677001 -221579582 - L2 LINE L2 -191 3081 2949 2230 246 47 39 chr2 31678103 31678948 -221577635 + L2 LINE L2 2376 3235 -78 324 338 149 7 chr2 31679231 31679379 -221577204 - L2 LINE L2 -1 3271 3103 1747 168 34 24 chr2 31680179 31680471 -221576112 + AluJb SINE Alu 4 298 -14 2219 112 7 0 chr2 31681007 31681303 -221575280 - AluSx SINE Alu -14 298 1 549 271 115 28 chr2 31681546 31681764 -221574819 - MIR SINE MIR 0 262 26 2399 79 0 10 chr2 31681765 31682068 -221574515 - AluSg SINE Alu -10 300 1 278 384 13 38 chr2 31682421 31682580 -221574003 - MIR SINE MIR -57 205 51 400 290 105 25 chr2 31683207 31683369 -221573214 + MER5A DNA MER1_type 1 175 -14 1016 257 16 0 chr2 31686057 31686314 -221570269 + L1MD3 LINE L1 7729 7989 -6 2550 158 36 11 chr2 31686761 31687211 -221569372 + MLT2C2 LTR ERVL 3 463 -1 496 233 151 0 chr2 31688291 31688450 -221568133 + MER53 DNA DNA 1 183 -6 440 215 62 31 chr2 31689544 31689674 -221566909 - L2 LINE L2 -1 3271 3138 384 296 262 4 chr2 31689847 31690114 -221566469 + L2 LINE L2 2978 3313 0 509 274 27 59 chr2 31691601 31691787 -221564796 - MER5A DNA MER1_type -3 186 7 894 222 90 15 chr2 31692113 31692379 -221564204 - Charlie4a DNA MER1_type 0 508 223 3037 110 16 9 chr2 31692380 31692833 -221563750 + L1PA16 LINE L1 5702 6157 -9 393 264 0 11 chr2 31692841 31692932 -221563651 + L1MC4 LINE L1 6614 6703 -1339 227 246 18 0 chr2 31692950 31693007 -221563576 + (TA)n Simple_repeat Simple_repeat 1 58 0 727 254 142 44 chr2 31693273 31693746 -221562837 + LTR33 LTR ERVL 3 521 0 378 297 39 39 chr2 31693751 31693906 -221562677 + MIR SINE MIR 74 228 -34 780 145 90 7 chr2 31694954 31695099 -221561484 + MLT1A1 LTR MaLR 3 159 -206 1113 150 6 0 chr2 31695099 31695266 -221561317 + FRAM SINE Alu 1 167 -9 1075 187 57 0 chr2 31695270 31695479 -221561104 + MLT1A1 LTR MaLR 145 365 0 233 373 55 8 chr2 31695597 31695762 -221560821 - MIR SINE MIR -71 137 17 297 314 112 61 chr2 31696666 31697321 -221559262 + L2 LINE L2 2288 2975 -339 7293 97 6 1 chr2 31697591 31699416 -221557167 - L1PA8 LINE L1 -5 6167 4336 21 0 0 0 chr2 31700715 31700736 -221555847 + AT_rich Low_complexity Low_complexity 1 21 0 374 288 73 57 chr2 31700868 31701045 -221555538 + MIR SINE MIR 49 228 -34 215 200 29 100 chr2 31701327 31701397 -221555186 + MIR3 SINE MIR 4 68 -140 376 292 69 15 chr2 31701469 31701599 -221554984 + MIR SINE MIR 1 137 -125 22 0 0 0 chr2 31701945 31701967 -221554616 + GC_rich Low_complexity Low_complexity 1 22 0 333 291 201 8 chr2 31703277 31703411 -221553172 - MIR SINE MIR -64 198 39 2102 121 0 63 chr2 31703745 31704076 -221552507 + AluSx SINE Alu 1 310 -2 2204 172 24 26 chr2 31704272 31704725 -221551858 + L1MB8 LINE L1 5727 6178 0 689 293 13 46 chr2 31704918 31705157 -221551426 - MIR SINE MIR -16 246 16 1983 115 3 23 chr2 31706492 31706797 -221549786 + L1PB1 LINE L1 5851 6149 -2 624 219 129 0 chr2 31707325 31707480 -221549103 - MER45A DNA AcHobo 0 178 4 495 48 0 0 chr2 31707804 31707866 -221548717 + (CA)n Simple_repeat Simple_repeat 1 62 0 310 345 7 14 chr2 31707896 31708041 -221548542 + CT-rich Low_complexity Low_complexity 1 144 0 234 301 14 14 chr2 31708131 31708204 -221548379 - L3 LINE CR1 -21 1556 1484 616 298 53 22 chr2 31708586 31708834 -221547749 + MIR SINE MIR 2 258 -4 684 293 236 11 chr2 31708851 31709426 -221547157 - L2 LINE L2 -13 3300 2589 358 267 147 0 chr2 31709746 31709862 -221546721 + MIR SINE MIR 20 152 -110 1159 211 120 88 chr2 31709959 31710424 -221546159 - MLT1H LTR MaLR -48 501 22 2610 142 26 21 chr2 31710484 31710908 -221545675 + MSTB LTR MaLR 1 426 0 301 297 119 0 chr2 31711454 31711555 -221545028 + L2 LINE L2 3160 3272 0 227 261 92 42 chr2 31711605 31711724 -221544859 + L3 LINE CR1 1148 1272 -305 394 283 58 29 chr2 31711776 31711949 -221544634 - MIR SINE MIR -77 185 8 186 43 0 0 chr2 31712148 31712171 -221544412 + (TA)n Simple_repeat Simple_repeat 2 24 0 378 301 89 0 chr2 31712297 31712420 -221544163 + MER94 DNA DNA 1 134 0 375 230 88 47 chr2 31712626 31712774 -221543809 - MIR SINE MIR -37 225 72 2538 163 20 13 chr2 31714813 31715267 -221541316 + LTR32 LTR ERVL 15 471 0 668 181 99 0 chr2 31715802 31715973 -221540610 - MER53 DNA DNA -1 188 1 257 235 163 51 chr2 31716149 31716247 -221540336 + MIR3 SINE MIR 5 113 -95 2412 110 0 0 chr2 31718278 31718587 -221537996 + AluSc SINE Alu 1 309 0 350 274 29 0 chr2 31718623 31718725 -221537858 + MER81 DNA DNA 1 105 -9 230 250 36 18 chr2 31719574 31719630 -221536953 + MIR SINE MIR 19 75 -133 228 159 246 14 chr2 31719708 31719777 -221536806 - MIR SINE MIR -71 191 107 380 251 126 60 chr2 31720165 31720282 -221536301 + MIR SINE MIR 65 198 -64 2286 104 0 10 chr2 31720282 31720580 -221536003 + AluSx SINE Alu 1 295 -17 380 251 126 60 chr2 31720580 31720629 -221535954 + MIR SINE MIR 198 242 -20 2376 116 14 11 chr2 31721315 31721678 -221534905 - THE1B LTR MaLR 0 364 1 295 243 0 3 chr2 31721996 31722065 -221534518 + MIR SINE MIR 84 140 -68 207 359 31 0 chr2 31722355 31722419 -221534164 + L3b LINE CR1 1508 1573 -10 * 543 266 77 73 chr2 31722418 31722745 -221533838 - L2 LINE L2 -79 3234 2907 506 267 72 113 chr2 31722767 31723310 -221533273 - L2 LINE L2 -905 2409 1900 2203 169 3 14 chr2 31723310 31723677 -221532906 + MLT1A1 LTR MaLR 1 363 -2 506 267 72 113 chr2 31723677 31723840 -221532743 - L2 LINE L2 -1414 1900 1732 236 188 59 79 chr2 31724103 31724204 -221532379 + MLT1E LTR MaLR 477 575 -18 513 316 56 32 chr2 31724233 31724609 -221531974 - L2 LINE L2 -1580 1734 1350 2238 98 34 0 chr2 31726022 31726318 -221530265 - AluSq SINE Alu -3 310 5 226 308 77 0 chr2 31726334 31726425 -221530158 + MIR SINE MIR 94 191 -71 1837 197 21 3 chr2 31726675 31727010 -221529573 + MER58B DNA MER1_type 1 341 0 1250 199 9 5 chr2 31727091 31727307 -221529276 - MLT1A1 LTR MaLR 0 365 149 2003 152 38 34 chr2 31727307 31727805 -221528778 + MLT2A2 LTR ERVL 1 514 -40 180 0 0 0 chr2 31727805 31727825 -221528758 + (TA)n Simple_repeat Simple_repeat 2 21 0 2003 152 38 34 chr2 31727825 31727867 -221528716 + MLT2A2 LTR ERVL 514 554 0 788 180 27 0 chr2 31727867 31728016 -221528567 - MLT1A1 LTR MaLR -212 153 1 387 301 260 0 chr2 31728114 31728287 -221528296 + L3 LINE CR1 1247 1464 -113 643 75 0 0 chr2 31728371 31728451 -221528132 + MADE1 DNA Mariner 1 80 0 1500 139 104 126 chr2 31729535 31729995 -221526588 + LTR7 LTR ERV1 1 450 0 251 280 68 15 chr2 31730329 31730461 -221526122 + MIR3 SINE MIR 20 158 -50 235 238 88 25 chr2 31731290 31731370 -221525213 + MIR SINE MIR 75 159 -103 2141 181 47 66 chr2 31731370 31731885 -221524698 - MLT1D LTR MaLR 0 505 1 210 309 106 21 chr2 31731923 31732017 -221524566 + MIR3 SINE MIR 71 172 -36 197 83 28 0 chr2 31732333 31732369 -221524214 + (CCA)n Simple_repeat Simple_repeat 1 37 0 331 265 141 16 chr2 31732947 31733132 -221523451 - L2 LINE L2 0 3313 3106 343 268 117 50 chr2 31733364 31733543 -221523040 + MIR3 SINE MIR 14 204 -4 2428 145 23 51 chr2 31734160 31734594 -221521989 - Tigger2a DNA MER2_type 0 434 13 717 312 112 27 chr2 31734685 31735694 -221520889 - L1MC/D LINE L1 -743 5403 4309 1193 187 35 0 chr2 31735694 31735897 -221520686 + MER6B DNA MER2_type 1 210 0 717 312 112 27 chr2 31735897 31736211 -221520372 - L1MC/D LINE L1 -1837 4309 4023 2227 160 14 0 chr2 31736269 31736625 -221519958 - MER47A DNA MER2_type 0 366 6 433 280 173 11 chr2 31736672 31736943 -221519640 - L1P LINE L1 -2192 3954 3640 311 292 119 57 chr2 31736979 31737282 -221519301 - L1MC/D LINE L1 -2616 3530 3247 2684 98 21 24 chr2 31737282 31737658 -221518925 + THE1C LTR MaLR 1 375 0 311 292 119 57 chr2 31737658 31738657 -221517926 - L1MC/D LINE L1 -2899 3247 2147 1294 260 115 37 chr2 31739168 31739714 -221516869 - HAL1b LINE L1 -415 933 345 4082 259 105 39 chr2 31739755 31741006 -221515577 - L1MC4 LINE L1 -2 8040 6674 2093 125 3 0 chr2 31741006 31741293 -221515290 + AluSx SINE Alu 23 310 -2 4082 259 105 39 chr2 31741293 31741523 -221515060 - L1MC4 LINE L1 -1368 6674 6461 253 262 131 0 chr2 31741818 31741940 -221514643 - HAL1b LINE L1 -1125 223 86 500 240 175 7 chr2 31742476 31742630 -221513953 + L1ME3A LINE L1 5988 6167 -3 314 339 78 17 chr2 31744407 31744587 -221511996 + MIR3 SINE MIR 11 201 -7 210 324 124 49 chr2 31746128 31746313 -221510270 - L3 LINE CR1 -1157 420 222 211 373 0 0 chr2 31746893 31746952 -221509631 + L2 LINE L2 3206 3264 -8 4234 99 45 2 chr2 31749198 31749754 -221506829 + LTR19B LTR ERV1 1 580 0 274 281 117 61 chr2 31750085 31750495 -221506088 + HAL1 LINE L1 1109 1541 -966 1889 149 0 19 chr2 31750505 31750813 -221505770 + AluJo SINE Alu 1 302 -10 1203 171 151 16 chr2 31751316 31751568 -221505015 + AluJo SINE Alu 2 287 -25 345 294 131 35 chr2 31751688 31752055 -221504528 + L1MEc LINE L1 2073 2474 -3922 351 337 71 51 chr2 31752097 31752303 -221504280 + L1MEc LINE L1 2538 2738 -3477 2107 110 27 7 chr2 31752303 31752603 -221503980 + AluSp SINE Alu 1 306 -7 351 337 71 51 chr2 31752603 31752971 -221503612 + L1MEc LINE L1 2738 3119 -3096 412 324 134 3 chr2 31752990 31753280 -221503303 + L1MEc LINE L1 3207 3534 -2681 524 249 137 46 chr2 31753369 31753654 -221502929 - MLT1J1 LTR MaLR -120 326 16 328 296 128 14 chr2 31753715 31754060 -221502523 + L1MEc LINE L1 3595 3978 -2237 300 328 127 32 chr2 31754076 31754384 -221502199 + L1MEc LINE L1 4016 4352 -1863 1108 290 84 46 chr2 31754393 31755415 -221501168 + L1MEc LINE L1 4836 5399 -816 2846 7 0 0 chr2 31755415 31755720 -221500863 + AluY SINE Alu 1 305 -6 1108 290 84 46 chr2 31755720 31755796 -221500787 + L1MEc LINE L1 5399 5471 -744 2199 107 3 0 chr2 31756106 31756396 -221500187 - AluSx SINE Alu -21 291 1 409 244 199 6 chr2 31758044 31758200 -221498383 - MER5A DNA MER1_type 0 189 4 1246 177 38 56 chr2 31758316 31758440 -221498143 - MER58B DNA MER1_type -2113 307 182 2472 66 0 3 chr2 31758440 31758742 -221497841 + AluY SINE Alu 1 301 -10 1246 177 38 56 chr2 31758742 31758883 -221497700 - MER58B DNA MER1_type -2238 182 47 213 294 81 23 chr2 31759989 31760086 -221496497 + MIR SINE MIR 50 150 -61 628 137 0 0 chr2 31760152 31760247 -221496336 - AluSg/x SINE Alu -3 309 215 228 276 17 0 chr2 31760326 31760384 -221496199 + MIR SINE MIR 156 214 -48 333 317 83 46 chr2 31761881 31762121 -221494462 + MIR SINE MIR 8 256 -6 949 203 102 4 chr2 31762584 31762820 -221493763 - L1ME3A LINE L1 0 6170 5912 1385 194 52 26 chr2 31762821 31763130 -221493453 + MER58B DNA MER1_type 17 333 -8 533 205 25 16 chr2 31763159 31763281 -221493302 - L1ME3A LINE L1 -497 5673 5551 23 33 0 0 chr2 31764492 31764522 -221492061 + AT_rich Low_complexity Low_complexity 1 30 0 341 312 16 32 chr2 31764722 31764847 -221491736 + MIR SINE MIR 70 192 -70 582 118 0 0 chr2 31766275 31766368 -221490215 + (TG)n Simple_repeat Simple_repeat 2 94 0 189 0 0 0 chr2 31767827 31767848 -221488735 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 3822 142 36 69 chr2 31768111 31768825 -221487758 + LTR8 LTR ERV1 1 691 0 302 215 103 37 chr2 31770541 31770680 -221485903 + MIR SINE MIR 18 166 -57 5825 68 12 0 chr2 31770960 31771698 -221484885 + L1PA6 LINE L1 5332 6078 -76 2052 299 41 29 chr2 31771843 31772323 -221484260 - L1MEc LINE L1 -5355 1041 568 2039 139 0 0 chr2 31772323 31772610 -221483973 + AluSx SINE Alu 1 287 -25 2052 299 41 29 chr2 31772610 31773122 -221483461 - L1MEc LINE L1 -5828 568 37 572 299 92 0 chr2 31773149 31773333 -221483250 + MIR SINE MIR 52 252 -10 22 0 0 0 chr2 31774051 31774073 -221482510 + AT_rich Low_complexity Low_complexity 1 22 0 411 350 13 6 chr2 31774276 31774433 -221482150 + MER5A DNA MER1_type 32 189 0 195 318 68 0 chr2 31774889 31774977 -221481606 + L2 LINE L2 3169 3262 -10 367 305 201 29 chr2 31775344 31775718 -221480865 + L2 LINE L2 2826 3263 -9 692 135 8 45 chr2 31776187 31776320 -221480263 + MER39B LTR ERV1 526 653 0 261 151 0 0 chr2 31777417 31777470 -221479113 + (CCG)n Simple_repeat Simple_repeat 1 53 0 666 205 23 29 chr2 31778209 31778380 -221478203 + MER58B DNA MER1_type 172 341 0 190 254 91 0 chr2 31779710 31779765 -221476818 - MIR3 SINE MIR -8 200 141 184 125 107 54 chr2 31780421 31780477 -221476106 + L2 LINE L2 2995 3053 -260 186 43 0 0 chr2 31780703 31780726 -221475857 + (A)n Simple_repeat Simple_repeat 1 23 0 816 213 53 32 chr2 31780727 31780998 -221475585 + L1MB7 LINE L1 5573 5854 -330 1861 201 76 18 chr2 31781432 31781897 -221474686 - MLT1D LTR MaLR 0 505 1 228 294 59 12 chr2 31781899 31781984 -221474599 - MIR SINE MIR -84 178 90 519 317 140 28 chr2 31782030 31782424 -221474159 - L2 LINE L2 -16 3297 2860 500 281 92 50 chr2 31782422 31782660 -221473923 + L2 LINE L2 3022 3269 -3 * 344 283 40 0 chr2 31783878 31783977 -221472606 + MIR SINE MIR 30 132 -76 443 275 93 3 chr2 31783988 31784155 -221472428 + MIR SINE MIR 39 217 -45 638 249 124 85 chr2 31784446 31784961 -221471622 + LTR67 LTR ERVL 2 536 -21 2297 79 0 0 chr2 31784968 31785258 -221471325 - AluSg SINE Alu -20 290 1 264 200 0 0 chr2 31785289 31785339 -221471244 + MIR SINE MIR 96 145 -117 245 295 0 0 chr2 31785769 31785830 -221470753 + L2 LINE L2 3245 3305 -8 830 253 45 9 chr2 31785980 31786201 -221470382 - MIR SINE MIR 0 262 34 252 304 134 0 chr2 31787165 31787277 -221469306 + MIR3 SINE MIR 77 203 -5 1653 108 0 24 chr2 31787969 31788218 -221468365 + AluSg SINE Alu 1 243 -67 362 286 40 32 chr2 31789828 31789954 -221466629 + MIR SINE MIR 20 146 -116 23 0 0 0 chr2 31790152 31790175 -221466408 + GC_rich Low_complexity Low_complexity 1 23 0 1094 148 69 5 chr2 31792183 31792214 -221464369 + AluJo SINE Alu 87 115 -197 180 0 0 0 chr2 31792214 31792234 -221464349 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1094 148 69 5 chr2 31792234 31792404 -221464179 + AluJo SINE Alu 115 301 -11 2180 94 3 7 chr2 31794145 31794453 -221462130 + AluSq SINE Alu 7 313 0 491 259 15 0 chr2 31794844 31794975 -221461608 - MER94 DNA DNA -1 133 1 278 210 0 32 chr2 31795366 31795428 -221461155 - Charlie8 DNA MER1_type -1001 1416 1357 458 292 55 64 chr2 31795530 31795749 -221460834 - Charlie8 DNA MER1_type -2199 218 2 305 305 39 39 chr2 31796060 31796188 -221460395 - MIR3 SINE MIR -28 180 53 254 271 0 0 chr2 31797846 31797916 -221458667 + (TA)n Simple_repeat Simple_repeat 2 71 0 193 341 12 12 chr2 31798144 31798226 -221458357 + MER5B DNA MER1_type 1 82 -96 245 269 36 104 chr2 31798658 31798937 -221457646 - L1MC4 LINE L1 -2 8040 7781 355 335 41 41 chr2 31799332 31799526 -221457057 + MIR3 SINE MIR 10 203 -5 21 0 0 0 chr2 31800128 31800149 -221456434 + AT_rich Low_complexity Low_complexity 1 21 0 843 252 172 17 chr2 31800744 31801046 -221455537 + L2 LINE L2 2965 3313 0 258 32 0 0 chr2 31801046 31801077 -221455506 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 180 97 0 0 chr2 31801120 31801151 -221455432 + (A)n Simple_repeat Simple_repeat 1 31 0 2366 87 0 0 chr2 31803328 31803637 -221452946 - AluSp SINE Alu -4 309 1 391 262 40 24 chr2 31804278 31804404 -221452179 - L2 LINE L2 0 3313 3186 336 315 93 82 chr2 31804572 31804955 -221451628 - L2 LINE L2 -261 3052 2675 2324 68 3 0 chr2 31804955 31805249 -221451334 - AluY SINE Alu -16 295 1 336 315 93 82 chr2 31805249 31805419 -221451164 - L2 LINE L2 -638 2675 2508 243 284 39 63 chr2 31805528 31805655 -221450928 - L2 LINE L2 -222 3050 2927 400 356 17 17 chr2 31805900 31806077 -221450506 + MER5A DNA MER1_type 8 184 -5 1506 203 0 7 chr2 31806179 31806508 -221450075 - AluJo SINE Alu 0 327 1 238 301 41 0 chr2 31806517 31806590 -221449993 - MIR SINE MIR -108 154 79 275 303 0 87 chr2 31809260 31809373 -221447210 - MER5A DNA MER1_type -5 184 72 243 353 33 1 chr2 31811445 31811540 -221445043 + MIR SINE MIR 17 110 -102 993 199 44 36 chr2 31811540 31811877 -221444706 + Charlie1a DNA MER1_type 2 379 -1076 968 217 107 75 chr2 31811880 31812254 -221444329 + LTR41 LTR ERVL 377 762 -11 357 271 15 5 chr2 31813407 31813510 -221443073 - MIR SINE MIR -64 144 42 337 316 41 35 chr2 31814740 31814911 -221441672 - MIR SINE MIR -56 206 35 423 68 0 0 chr2 31815049 31815108 -221441475 + (CA)n Simple_repeat Simple_repeat 2 60 0 273 290 76 130 chr2 31819340 31819602 -221436981 + L2 LINE L2 2978 3225 -47 300 299 31 24 chr2 31820300 31820427 -221436156 - MIR SINE MIR -119 143 16 299 143 0 14 chr2 31820666 31820736 -221435847 + (TC)n Simple_repeat Simple_repeat 2 70 0 228 86 0 0 chr2 31821937 31821972 -221434611 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 295 240 223 23 chr2 31822176 31822351 -221434232 - MIR SINE MIR -6 256 47 261 258 22 45 chr2 31824211 31824300 -221432283 + MIR SINE MIR 65 151 -111 195 344 100 11 chr2 31824762 31824852 -221431731 + L2 LINE L2 3124 3221 -51 415 337 84 20 chr2 31825307 31825503 -221431080 - MIR SINE MIR -49 213 5 407 307 134 39 chr2 31825738 31826044 -221430539 + L2 LINE L2 2935 3269 -3 279 237 301 0 chr2 31826741 31826834 -221429749 - MIR SINE MIR -71 191 71 1080 173 112 9 chr2 31828408 31828622 -221427961 - MER46A DNA MER2_type 0 236 1 192 346 10 40 chr2 31829264 31829365 -221427218 + MIR SINE MIR 2 99 -163 653 273 35 10 chr2 31830187 31830385 -221426198 - MIR3 SINE MIR -3 205 3 313 269 64 43 chr2 31830962 31831103 -221425480 + MLT1H LTR MaLR 125 268 -281 232 208 0 21 chr2 31831289 31831337 -221425246 + L2 LINE L2 3212 3258 -14 248 75 0 25 chr2 31831337 31831377 -221425206 + (TGAA)n Simple_repeat Simple_repeat 4 42 0 213 246 215 0 chr2 31832393 31832458 -221424125 + MIR SINE MIR 114 192 -70 213 341 23 85 chr2 31833061 31833319 -221423264 - L2 LINE L2 -451 2863 2622 186 250 17 17 chr2 31833750 31833810 -221422773 + MIR SINE MIR 86 145 -117 181 340 21 32 chr2 31833830 31833924 -221422659 - L3b LINE CR1 -278 1305 1213 641 355 9 4 chr2 31833960 31834191 -221422392 - MIR SINE MIR -16 246 15 251 275 38 25 chr2 31834572 31834652 -221421931 - L3 LINE CR1 -1 1576 1496 947 67 20 13 chr2 31834658 31834808 -221421775 + (TTTC)n Simple_repeat Simple_repeat 2 152 0 5131 30 0 3 chr2 31834810 31835405 -221421178 - L1PA3 LINE L1 0 6155 5563 12581 30 0 0 chr2 31835405 31837046 -221419537 + L1PA3 LINE L1 3920 5560 -595 312 222 0 0 chr2 31837047 31837119 -221419464 + CT-rich Low_complexity Low_complexity 1 72 0 474 216 123 53 chr2 31837847 31838018 -221418565 + MIR SINE MIR 80 262 0 481 209 24 46 chr2 31838405 31838536 -221418047 + MIR SINE MIR 18 161 -62 1266 195 105 76 chr2 31838542 31838989 -221417594 + MLT1C LTR MaLR 6 465 -2 723 91 0 10 chr2 31838994 31839093 -221417490 + MER4A LTR ERV1 1 98 -566 1995 111 11 25 chr2 31839093 31839443 -221417140 + MER4A LTR ERV1 261 664 0 373 257 30 0 chr2 31839443 31839544 -221417039 + MIR SINE MIR 157 260 -2 2128 112 0 3 chr2 31840963 31841267 -221415316 - AluSq SINE Alu -10 303 1 1452 192 46 23 chr2 31841629 31842020 -221414563 - MER54B LTR ERVL -5 788 487 303 191 16 0 chr2 31842032 31842095 -221414488 + MER4-int LTR ERV1 1099 1162 -5436 654 178 0 0 chr2 31842103 31842232 -221414351 + (TG)n Simple_repeat Simple_repeat 1 129 0 209 337 67 0 chr2 31843514 31843603 -221412980 + MIR SINE MIR 53 147 -115 4715 180 31 15 chr2 31845258 31846106 -221410477 + MER21B LTR ERV1 1 861 -2 1079 99 0 0 chr2 31846984 31847135 -221409448 - AluSg/x SINE Alu -1 311 161 624 192 11 73 chr2 31847175 31847352 -221409231 + GSAT Satellite centromeric 3 168 -49 1226 92 0 12 chr2 31847353 31847517 -221409066 - AluSq SINE Alu -151 162 1 227 229 71 29 chr2 31847601 31847671 -221408912 + MLT1L LTR MaLR 1 73 -542 351 263 144 8 chr2 31847810 31847928 -221408655 - L2 LINE L2 -1 3271 3138 695 242 119 45 chr2 31848308 31848448 -221408135 - MER5C DNA MER1_type -2 322 194 1613 176 10 3 chr2 31848448 31848737 -221407846 + AluJb SINE Alu 1 291 -21 695 242 119 45 chr2 31848737 31848865 -221407718 - MER5C DNA MER1_type -130 194 34 994 171 18 0 chr2 31849938 31850108 -221406475 - AluJo SINE Alu -20 292 120 641 232 11 76 chr2 31850540 31850725 -221405858 - MER63A DNA MER1_type -37 173 1 2239 55 0 17 chr2 31850954 31851284 -221405299 + AluY SINE Alu 1 325 0 332 230 0 23 chr2 31851406 31851493 -221405090 - L1ME4a LINE L1 -53 6068 5984 365 304 106 64 chr2 31851506 31851818 -221404765 - L1MC4a LINE L1 -1859 5949 5625 * 568 338 48 13 chr2 31851794 31852022 -221404561 + L1ME4a LINE L1 3962 4197 -1949 454 344 28 36 chr2 31852046 31852293 -221404290 + L1ME4a LINE L1 4153 4397 -1749 396 313 183 9 chr2 31852376 31852464 -221404119 + L1ME4a LINE L1 5852 5923 -198 261 0 0 0 chr2 31852464 31852493 -221404090 + (CA)n Simple_repeat Simple_repeat 1 29 0 396 313 183 9 chr2 31852493 31852634 -221403949 + L1ME4a LINE L1 5923 6121 0 595 195 76 100 chr2 31852662 31852828 -221403755 + L1ME1 LINE L1 5955 6117 -49 1952 130 33 0 chr2 31852828 31853129 -221403454 + AluSx SINE Alu 1 311 -1 595 195 76 100 chr2 31853129 31853172 -221403411 + L1ME1 LINE L1 6117 6159 -7 308 188 58 29 chr2 31853489 31853558 -221403025 - L2 LINE L2 -1 3271 3201 251 270 32 0 chr2 31854266 31854329 -221402254 - MIR SINE MIR -108 154 90 3652 149 220 7 chr2 31854514 31855227 -221401356 - L1M1 LINE L1 -5287 2278 1414 1750 99 4 0 chr2 31855227 31855460 -221401123 - AluSc SINE Alu -75 234 1 764 70 130 17 chr2 31855461 31855576 -221401007 - AluSg SINE Alu -181 129 2 306 314 24 10 chr2 31856636 31856774 -221399809 + L1ME LINE L1 5296 5433 -688 27 0 0 0 chr2 31856852 31856879 -221399704 + AT_rich Low_complexity Low_complexity 1 27 0 204 194 28 0 chr2 31857074 31857110 -221399473 - L2 LINE L2 -18 3254 3218 185 148 0 0 chr2 31857137 31857164 -221399419 - MIR SINE MIR -154 108 82 2080 130 0 3 chr2 31857246 31857553 -221399030 + AluSx SINE Alu 1 306 -6 2217 184 154 28 chr2 31857555 31858100 -221398483 + MER90 LTR ERV1 1 614 0 751 164 9 0 chr2 31858425 31858541 -221398042 + FLAM_C SINE Alu 2 118 -25 811 174 0 0 chr2 31858720 31858852 -221397731 + AluSq/x SINE Alu 1 132 -180 4918 139 46 27 chr2 31859421 31859710 -221396873 + MER4D LTR ERV1 2 284 -619 2304 81 0 3 chr2 31859710 31860019 -221396564 + AluY SINE Alu 1 308 -3 4918 139 46 27 chr2 31860019 31860613 -221395970 + MER4D LTR ERV1 284 902 -1 928 230 0 5 chr2 31861205 31861409 -221395174 + AluJo SINE Alu 84 286 -26 2129 110 0 7 chr2 31861685 31861984 -221394599 + AluSx SINE Alu 1 297 -15 2262 81 0 10 chr2 31862194 31862501 -221394082 + AluY SINE Alu 1 304 -7 1951 136 0 10 chr2 31862817 31863125 -221393458 - AluSx SINE Alu -7 305 1 1059 116 12 6 chr2 31863144 31863308 -221393275 - AluSq SINE Alu -15 298 134 2135 107 0 7 chr2 31863429 31863727 -221392856 + AluSx SINE Alu 1 296 -16 2578 45 0 0 chr2 31863776 31864086 -221392497 + AluY SINE Alu 2 311 0 254 188 0 0 chr2 31864244 31864292 -221392291 + FLAM_A SINE Alu 84 131 -2 526 171 29 48 chr2 31864292 31864397 -221392186 + AluJo/FRAM SINE Alu 189 291 -21 24 32 0 0 chr2 31864397 31864428 -221392155 + AT_rich Low_complexity Low_complexity 1 31 0 2170 112 0 0 chr2 31864691 31864995 -221391588 + AluSx SINE Alu 1 304 -8 1902 137 10 13 chr2 31865049 31865362 -221391221 - AluJo SINE Alu 0 312 1 2057 89 4 0 chr2 31865375 31865656 -221390927 - AluSg SINE Alu -20 290 9 808 173 0 23 chr2 31865667 31865800 -221390783 - FLAM_C SINE Alu -3 130 1 2106 103 7 3 chr2 31866010 31866312 -221390271 - AluSg SINE Alu -7 303 1 202 252 87 68 chr2 31866465 31866568 -221390015 + L2 LINE L2 3192 3296 -17 1504 272 53 30 chr2 31866601 31867135 -221389448 - MLT1H LTR MaLR 0 593 1 1977 127 0 13 chr2 31867253 31867553 -221389030 + AluSx SINE Alu 1 296 -16 1474 174 3 48 chr2 31867720 31868014 -221388569 - AluJb SINE Alu -31 281 1 635 186 110 0 chr2 31868657 31868775 -221387808 + FLAM_A SINE Alu 3 133 0 26 30 0 0 chr2 31869168 31869201 -221387382 + AT_rich Low_complexity Low_complexity 1 33 0 554 198 11 126 chr2 31869615 31869693 -221386890 - Charlie8 DNA MER1_type -65 265 218 1760 164 7 3 chr2 31869693 31869991 -221386592 - AluJb SINE Alu -13 299 1 554 198 11 126 chr2 31869991 31870094 -221386489 - Charlie8 DNA MER1_type -112 218 105 672 191 0 0 chr2 31870124 31870250 -221386333 - FRAM SINE Alu -10 166 41 1793 138 0 40 chr2 31870266 31870460 -221386123 - AluSx SINE Alu 0 319 141 2215 103 0 0 chr2 31870460 31870770 -221385813 - AluSq SINE Alu -3 310 1 1793 138 0 40 chr2 31870770 31870906 -221385677 - AluSx SINE Alu -178 141 1 902 196 0 6 chr2 31870914 31871119 -221385464 + AluSg/x SINE Alu 120 323 0 23 78 0 0 chr2 31871361 31871412 -221385171 + AT_rich Low_complexity Low_complexity 1 51 0 2344 73 3 0 chr2 31871444 31871744 -221384839 + AluSp SINE Alu 1 301 -12 978 78 0 0 chr2 31872038 31872166 -221384417 + AluSc SINE Alu 168 295 -14 1500 180 0 48 chr2 31872169 31872464 -221384119 - AluJb SINE Alu -31 281 1 185 133 33 0 chr2 31872567 31872597 -221383986 + L2 LINE L2 3191 3221 -92 1836 182 132 25 chr2 31872627 31872699 -221383884 - MER68 LTR ERV1 -2 560 497 1556 128 0 0 chr2 31872699 31872925 -221383658 - AluSg/x SINE Alu -16 296 71 1836 182 132 25 chr2 31872925 31873253 -221383330 - MER68 LTR ERV1 -65 497 117 1612 172 0 0 chr2 31873259 31873571 -221383012 + AluJb SINE Alu 1 312 0 1809 101 4 8 chr2 31873620 31873878 -221382705 - AluSg SINE Alu -25 285 29 1088 54 0 0 chr2 31873898 31874028 -221382555 + AluYb8 SINE Alu 1 130 -188 277 195 0 0 chr2 31874130 31874171 -221382412 - AluSg SINE Alu -261 41 1 348 269 83 58 chr2 31874235 31874267 -221382316 + MIR3 SINE MIR 34 64 -144 2106 108 0 3 chr2 31874267 31874563 -221382020 - AluSx SINE Alu -17 295 1 348 269 83 58 chr2 31874563 31874686 -221381897 + MIR3 SINE MIR 64 193 -15 270 0 0 0 chr2 31874686 31874716 -221381867 + (TG)n Simple_repeat Simple_repeat 1 30 0 2270 50 4 0 chr2 31874716 31874995 -221381588 - AluY SINE Alu -31 280 1 694 134 0 0 chr2 31875238 31875335 -221381248 + AluSq SINE Alu 2 98 -215 1498 133 5 0 chr2 31875455 31875673 -221380910 + AluSq SINE Alu 94 312 -1 528 255 80 14 chr2 31877074 31877286 -221379297 - HAL1b LINE L1 -750 598 373 4511 149 41 37 chr2 31877321 31878831 -221377752 - L1PA16 LINE L1 -104 6062 4544 1690 226 0 41 chr2 31878831 31879112 -221377471 + L1 LINE L1 4136 4394 -1752 2409 82 0 16 chr2 31879112 31879429 -221377154 + AluSx SINE Alu 1 312 0 1690 226 0 41 chr2 31879429 31879584 -221376999 + L1 LINE L1 4394 4554 -1592 1600 137 29 4 chr2 31879960 31880201 -221376382 + AluSx SINE Alu 54 300 -12 617 157 74 25 chr2 31880208 31880329 -221376254 + AluJb SINE Alu 2 128 -184 42 0 0 0 chr2 31880335 31880377 -221376206 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr2 31880510 31880533 -221376050 + AT_rich Low_complexity Low_complexity 1 23 0 259 150 0 0 chr2 31881557 31881597 -221374986 - L1M4 LINE L1 -1584 4562 4523 * 1873 234 50 27 chr2 31881594 31881973 -221374610 + L1ME1 LINE L1 5551 5951 -215 2041 93 62 7 chr2 31881973 31882262 -221374321 - AluSc SINE Alu -4 305 1 1873 234 50 27 chr2 31882262 31882480 -221374103 + L1ME1 LINE L1 5951 6162 -4 1962 146 7 10 chr2 31882552 31882853 -221373730 + AluJo SINE Alu 3 302 -10 23 68 0 0 chr2 31883014 31883058 -221373525 + AT_rich Low_complexity Low_complexity 1 44 0 242 139 18 2 chr2 31883276 31883442 -221373141 + AluJb SINE Alu 86 290 -12 37 23 0 0 chr2 31883524 31883568 -221373015 + AT_rich Low_complexity Low_complexity 1 44 0 1961 132 17 10 chr2 31884170 31884459 -221372124 + AluSp SINE Alu 1 291 -22 1996 135 3 20 chr2 31884660 31884963 -221371620 - AluJb SINE Alu -14 298 1 311 167 0 0 chr2 31884965 31885013 -221371570 - MER58 DNA MER1_type -133 82 35 1649 173 0 33 chr2 31885843 31886149 -221370434 + AluJo SINE Alu 1 296 -16 2293 84 44 0 chr2 31886151 31886447 -221370136 + AluSg SINE Alu 1 309 -1 216 0 0 0 chr2 31886912 31886936 -221369647 + (T)n Simple_repeat Simple_repeat 1 24 0 1654 131 25 0 chr2 31886945 31887182 -221369401 - AluSx SINE Alu -69 243 1 2420 57 0 0 chr2 31887184 31887496 -221369087 - AluY SINE Alu 0 312 1 1554 176 4 11 chr2 31887496 31887774 -221368809 - AluJb SINE Alu -11 301 26 1172 60 0 0 chr2 31887955 31888088 -221368495 + AluSq/x SINE Alu 1 133 -180 2160 113 0 10 chr2 31888093 31888402 -221368181 + AluSg SINE Alu 1 306 -4 1291 266 71 63 chr2 31888440 31888872 -221367711 + HAL1 LINE L1 583 1010 -1497 2365 97 0 10 chr2 31888872 31889180 -221367403 + AluSx SINE Alu 1 305 -7 1291 266 71 63 chr2 31889180 31889275 -221367308 + HAL1 LINE L1 1010 1103 -1404 2062 96 44 0 chr2 31889275 31889546 -221367037 + AluSq SINE Alu 1 283 -30 1291 266 71 63 chr2 31889546 31890331 -221366252 + HAL1 LINE L1 1103 2128 -379 525 168 88 18 chr2 31890589 31890702 -221365881 + FLAM_A SINE Alu 22 142 0 297 290 145 8 chr2 31892006 31892130 -221364453 + MIR3 SINE MIR 60 200 -8 267 237 26 61 chr2 31892379 31892493 -221364090 - MER113 DNA MER1_type? -406 115 6 1994 159 0 0 chr2 31892886 31893188 -221363395 + AluSq SINE Alu 2 303 -10 25 0 0 0 chr2 31893231 31893256 -221363327 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr2 31893407 31893431 -221363152 + AT_rich Low_complexity Low_complexity 1 24 0 2352 75 20 13 chr2 31893434 31893739 -221362844 - AluSc SINE Alu -2 307 1 1112 139 6 0 chr2 31893741 31893907 -221362676 - AluSg/x SINE Alu -20 292 126 1889 166 0 17 chr2 31893951 31894253 -221362330 + AluSx SINE Alu 1 297 -15 27 49 0 0 chr2 31894820 31894861 -221361722 + AT_rich Low_complexity Low_complexity 1 41 0 28 29 0 0 chr2 31895327 31895362 -221361221 + AT_rich Low_complexity Low_complexity 1 35 0 2381 59 39 0 chr2 31895474 31895760 -221360823 + AluSp SINE Alu 5 301 -12 26 50 0 0 chr2 31896161 31896201 -221360382 + AT_rich Low_complexity Low_complexity 1 40 0 1515 159 51 48 chr2 31896300 31896595 -221359988 - AluJo SINE Alu -16 296 1 1138 108 0 0 chr2 31896627 31896785 -221359798 + AluSc SINE Alu 152 309 0 2325 108 0 3 chr2 31896852 31897157 -221359426 + AluSx SINE Alu 2 305 -7 1398 141 173 0 chr2 31897333 31897582 -221359001 + AluJb SINE Alu 1 292 -20 2294 114 0 0 chr2 31898072 31898371 -221358212 + AluSg SINE Alu 1 299 -11 383 129 0 0 chr2 31898403 31898465 -221358118 + L1MA1 LINE L1 6059 6120 -182 1648 138 0 0 chr2 31898465 31898689 -221357894 + AluSx SINE Alu 1 224 -88 387 0 0 0 chr2 31898704 31898747 -221357836 + (CTA)n Simple_repeat Simple_repeat 1 43 0 40 37 0 0 chr2 31898749 31898803 -221357780 + AT_rich Low_complexity Low_complexity 1 54 0 2162 110 40 3 chr2 31899455 31899754 -221356829 - AluSg SINE Alu 0 310 1 282 319 104 22 chr2 31899754 31899889 -221356694 + MIR SINE MIR 117 262 0 276 308 26 17 chr2 31899894 31900011 -221356572 - L3 LINE CR1 -569 1008 891 239 311 88 28 chr2 31900577 31900931 -221355652 + L1ME LINE L1 4252 4626 -1520 27 29 0 0 chr2 31901197 31901231 -221355352 + AT_rich Low_complexity Low_complexity 1 34 0 398 215 143 53 chr2 31901267 31901476 -221355107 + L1ME LINE L1 5476 5703 -418 21 0 0 0 chr2 31902015 31902036 -221354547 + AT_rich Low_complexity Low_complexity 1 21 0 257 263 24 124 chr2 31903451 31903660 -221352923 - MIR SINE MIR -13 249 62 550 176 0 11 chr2 31904235 31904326 -221352257 + 5S rRNA rRNA 1 90 -31 260 324 94 33 chr2 31904605 31904818 -221351765 - MIR SINE MIR 0 262 37 1563 127 0 13 chr2 31905403 31905632 -221350951 + AluSg/x SINE Alu 87 312 0 1262 281 62 29 chr2 31905871 31905950 -221350633 - L1ME3A LINE L1 -280 5890 5815 1235 108 5 11 chr2 31905950 31906136 -221350447 - L1PA14 LINE L1 -1 6160 5976 1262 281 62 29 chr2 31906136 31906665 -221349918 - L1ME3A LINE L1 -355 5815 5259 222 209 11 33 chr2 31907016 31907107 -221349476 + CT-rich Low_complexity Low_complexity 3 91 0 670 255 43 49 chr2 31907145 31907474 -221349109 - L1ME3A LINE L1 -1493 4653 4327 2196 160 11 11 chr2 31908356 31908731 -221347852 - THE1C LTR MaLR 0 375 1 646 194 125 6 chr2 31908850 31909010 -221347573 - MER97b DNA MER1_type? -874 179 1 211 255 20 0 chr2 31911034 31911085 -221345498 - MIR SINE MIR -55 153 102 329 343 14 0 chr2 31911412 31911558 -221345025 - MIR3 SINE MIR -1 207 60 593 247 31 59 chr2 31913120 31913325 -221343258 - L1ME4a LINE L1 -45 6076 5882 2122 135 0 3 chr2 31913325 31913629 -221342954 - AluSx SINE Alu -9 303 1 593 247 31 59 chr2 31913629 31913747 -221342836 - L1ME4a LINE L1 -239 5882 5762 484 209 43 122 chr2 31913751 31913981 -221342602 - L1ME4a LINE L1 -295 5826 5615 23 33 0 0 chr2 31913996 31914026 -221342557 + AT_rich Low_complexity Low_complexity 1 30 0 232 300 33 0 chr2 31915584 31915674 -221340909 + MIR SINE MIR 93 185 -77 256 311 33 33 chr2 31917256 31917346 -221339237 + MIR SINE MIR 8 97 -165 252 247 75 0 chr2 31917393 31917486 -221339097 - MIR SINE MIR -38 224 125 244 304 49 10 chr2 31917478 31917580 -221339003 + MIR SINE MIR 140 245 -17 * 2347 73 0 10 chr2 31918598 31918914 -221337669 + AluSq SINE Alu 1 313 0 1761 166 3 7 chr2 31918918 31919202 -221337381 + AluSx SINE Alu 1 283 -29 2268 85 11 0 chr2 31919344 31919677 -221336906 - AluSq SINE Alu 0 336 1 226 338 62 0 chr2 31920794 31920874 -221335709 + MIR SINE MIR 30 114 -94 375 276 179 5 chr2 31921105 31921301 -221335282 + MIR SINE MIR 7 236 -26 234 0 0 0 chr2 31921452 31921478 -221335105 + (TA)n Simple_repeat Simple_repeat 2 27 0 2335 83 0 58 chr2 31921478 31921804 -221334779 - AluSp SINE Alu -6 307 1 2184 113 0 0 chr2 31922824 31923107 -221333476 - AluSx SINE Alu -16 296 14 186 45 68 23 chr2 31923211 31923255 -221333328 + T-rich Low_complexity Low_complexity 2 47 0 26 50 0 0 chr2 31923266 31923306 -221333277 + AT_rich Low_complexity Low_complexity 1 40 0 181 216 20 0 chr2 31924224 31924275 -221332308 + L2 LINE L2 3000 3051 -221 258 203 0 34 chr2 31925614 31925673 -221330910 + MIR SINE MIR 117 173 -89 464 246 68 111 chr2 31925897 31926149 -221330434 + MIR SINE MIR 7 247 -15 2374 96 0 7 chr2 31926187 31926490 -221330093 - AluSc SINE Alu -8 301 1 202 254 68 0 chr2 31928079 31928138 -221328445 + MIR SINE MIR 120 182 -80 326 207 0 0 chr2 31928255 31928313 -221328270 - MER91B DNA MER1_type -127 63 6 1543 117 0 0 chr2 31928355 31928599 -221327984 - AluSc SINE Alu 0 309 98 217 239 15 15 chr2 31929073 31929140 -221327443 + (CA)n Simple_repeat Simple_repeat 2 68 0 306 0 0 0 chr2 31929170 31929204 -221327379 + (CA)n Simple_repeat Simple_repeat 1 34 0 330 357 117 13 chr2 31929349 31929503 -221327080 + MER91A DNA MER1_type 15 184 -12 214 238 109 33 chr2 31930000 31930113 -221326470 - MIR SINE MIR -60 148 14 498 268 21 20 chr2 31930656 31930832 -221325751 + MIR SINE MIR 19 192 -65 239 195 0 0 chr2 31931387 31931428 -221325155 - MIR SINE MIR -110 152 112 522 240 71 19 chr2 31931952 31932106 -221324477 - MIR3 SINE MIR -29 179 18 218 223 125 71 chr2 31932191 31932303 -221324280 - MIR SINE MIR -35 227 110 298 281 70 47 chr2 31932362 31932490 -221324093 - L2 LINE L2 -1 3271 3141 201 39 0 0 chr2 31933367 31933393 -221323190 + (GGGA)n Simple_repeat Simple_repeat 4 29 0 339 236 139 48 chr2 31933404 31933569 -221323014 + MIR SINE MIR 23 202 -60 321 215 38 0 chr2 31933864 31933943 -221322640 + MIR3 SINE MIR 93 174 -34 792 296 9 26 chr2 31934443 31934676 -221321907 + MIR SINE MIR 13 241 -21 886 162 92 0 chr2 31934694 31934867 -221321716 + MER5A DNA MER1_type 1 189 0 292 239 15 0 chr2 31935205 31935272 -221321311 + MIR SINE MIR 68 135 -73 180 250 0 0 chr2 31935278 31935314 -221321269 - MIR SINE MIR -116 146 111 2187 103 3 3 chr2 31935842 31936134 -221320449 + AluSx SINE Alu 1 292 -20 456 294 128 37 chr2 31936135 31936353 -221320230 - MIR SINE MIR -5 257 20 468 271 148 48 chr2 31936990 31937200 -221319383 + MIR SINE MIR 26 256 -6 407 269 46 0 chr2 31938319 31938449 -221318134 + MIR SINE MIR 111 246 -16 2093 116 17 7 chr2 31938559 31938852 -221317731 + AluSx SINE Alu 1 296 -16 6681 136 62 16 chr2 31939962 31940457 -221316126 - Tigger3b DNA MER2_type -1797 1231 760 2342 70 17 17 chr2 31940457 31940756 -221315827 - AluSc SINE Alu -10 299 1 6681 136 62 16 chr2 31940756 31941437 -221315146 - Tigger3b DNA MER2_type -2268 760 1 215 196 20 39 chr2 31941439 31941490 -221315093 + MER5B DNA MER1_type 126 175 -3 366 61 0 0 chr2 31942685 31942734 -221313849 + (CA)n Simple_repeat Simple_repeat 2 50 0 510 318 33 33 chr2 31943405 31943616 -221312967 - MIR SINE MIR -5 257 47 1290 189 124 130 chr2 31945280 31945785 -221310798 - LTR36 LTR ERV1 0 611 109 1905 121 7 59 chr2 31945785 31946090 -221310493 - AluSx SINE Alu -23 289 1 1290 189 124 130 chr2 31946090 31946199 -221310384 - LTR36 LTR ERV1 -502 109 1 387 286 132 50 chr2 31947084 31947448 -221309135 + MLT1I LTR MaLR 9 402 -7 2438 102 0 0 chr2 31947550 31947855 -221308728 + AluSg SINE Alu 1 305 -5 254 224 26 13 chr2 31948091 31948167 -221308416 + MLT1J LTR MaLR 95 171 -340 * 264 270 27 14 chr2 31948106 31948180 -221308403 + LTR67 LTR ERVL 115 189 -368 180 158 0 0 chr2 31948444 31948482 -221308101 + (TG)n Simple_repeat Simple_repeat 2 39 0 393 22 0 0 chr2 31949874 31949920 -221306663 + (CA)n Simple_repeat Simple_repeat 1 46 0 219 88 0 0 chr2 31949923 31949957 -221306626 + (TC)n Simple_repeat Simple_repeat 1 34 0 1437 207 39 24 chr2 31951009 31951347 -221305236 + LTR16A LTR ERVL 108 450 0 1376 169 24 4 chr2 31952785 31953033 -221303550 + L1MC1 LINE L1 6075 6327 -6 2189 115 0 3 chr2 31953033 31953328 -221303255 + AluSq SINE Alu 1 294 -19 28 29 0 0 chr2 31953328 31953363 -221303220 + AT_rich Low_complexity Low_complexity 1 35 0 26 0 0 0 chr2 31953492 31953518 -221303065 + AT_rich Low_complexity Low_complexity 1 26 0 408 20 0 0 chr2 31954240 31954289 -221302294 + (TG)n Simple_repeat Simple_repeat 1 49 0 338 257 169 14 chr2 31954580 31954728 -221301855 + MIR SINE MIR 79 249 -13 633 211 6 6 chr2 31955547 31955708 -221300875 + FRAM SINE Alu 1 142 -34 219 69 0 0 chr2 31955740 31955769 -221300814 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 629 224 68 96 chr2 31956184 31956434 -221300149 - MIR SINE MIR 0 262 20 2065 70 8 8 chr2 31956567 31956826 -221299757 - AluSp SINE Alu -1 312 54 402 214 36 45 chr2 31958076 31958142 -221298441 + MER81 DNA DNA 1 67 -47 4325 90 0 0 chr2 31958142 31958696 -221297887 + MER41A LTR ERV1 1 554 0 402 214 36 45 chr2 31958696 31958741 -221297842 + MER81 DNA DNA 67 111 -3 1829 171 88 79 chr2 31959386 31959929 -221296654 + LTR10A LTR ERV1 1 548 -61 339 292 37 27 chr2 31960186 31960296 -221296287 + MIR SINE MIR 38 147 -67 2271 106 59 0 chr2 31960296 31960636 -221295947 + MLT1A1 LTR MaLR 1 360 -5 5121 94 1 11 chr2 31960637 31961380 -221295203 + LTR17 LTR ERV1 1 780 0 1502 200 34 0 chr2 31961536 31961801 -221294782 + AluJo SINE Alu 5 278 -34 198 103 0 0 chr2 31961833 31961862 -221294721 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 252 318 0 59 chr2 31962356 31962441 -221294142 - MIR SINE MIR -95 113 34 1905 151 23 0 chr2 31962589 31962888 -221293695 - AluSq SINE Alu -7 306 1 204 97 0 0 chr2 31962969 31963000 -221293583 + (GA)n Simple_repeat Simple_repeat 2 32 0 293 360 8 8 chr2 31963158 31963283 -221293300 - L2 LINE L2 0 3272 3148 411 281 0 0 chr2 31963296 31963392 -221293191 + MIR SINE MIR 59 154 -108 4437 98 32 33 chr2 31964552 31965213 -221291370 - PABL_A LTR ERV1 0 660 1 2096 145 3 0 chr2 31965793 31966097 -221290486 + AluSx SINE Alu 1 305 -7 488 274 111 26 chr2 31966496 31966649 -221289934 + MLT1I LTR MaLR 98 263 -146 2251 95 3 26 chr2 31966807 31967111 -221289472 + AluSp SINE Alu 1 297 -16 1877 152 26 3 chr2 31967660 31967962 -221288621 - AluJb SINE Alu -3 309 1 446 154 15 7 chr2 31968123 31968211 -221288372 + MLT1I LTR MaLR 324 445 -5 581 254 35 7 chr2 31968220 31968362 -221288221 - MIR3 SINE MIR -33 175 30 3464 151 25 79 chr2 31968384 31969115 -221287468 - LTR8 LTR ERV1 0 691 1 487 242 40 16 chr2 31969151 31969275 -221287308 + MIR3 SINE MIR 41 167 -41 3943 160 50 11 chr2 31969397 31970097 -221286486 - LTR8A LTR ERV1 0 727 1 1073 155 21 21 chr2 31970766 31970960 -221285623 + MLT1A1 LTR MaLR 1 194 -171 341 216 114 0 chr2 31970971 31971059 -221285524 - MIR SINE MIR -70 138 41 4935 128 67 5 chr2 31971132 31971908 -221284675 + LTR1B LTR ERV1 1 824 -2 226 308 7 96 chr2 31972280 31972426 -221284157 + MIR SINE MIR 106 238 -24 253 315 74 60 chr2 31973850 31974066 -221282517 - MIR SINE MIR -42 220 2 412 349 65 0 chr2 31974405 31974666 -221281917 + L1PA14 LINE L1 5648 5925 -236 * 2171 155 35 12 chr2 31974436 31974861 -221281722 + L1MB5 LINE L1 5686 6120 -54 269 271 74 33 chr2 31976115 31976237 -221280346 - MIR SINE MIR -44 218 92 1044 251 132 20 chr2 31976931 31977234 -221279349 - MER46C DNA MER2_type 0 338 2 672 287 30 10 chr2 31977234 31977436 -221279147 - MIR SINE MIR -1 261 56 405 316 168 5 chr2 31977734 31977943 -221278640 + MIR SINE MIR 4 246 -16 257 264 69 11 chr2 31978703 31978790 -221277793 + L2 LINE L2 3181 3272 0 294 106 0 0 chr2 31980416 31980463 -221276120 + (TG)n Simple_repeat Simple_repeat 1 47 0 440 321 34 17 chr2 31980799 31981159 -221275424 + ERVL LTR ERVL 4555 4698 -298 326 260 15 1 chr2 31981232 31981322 -221275261 + LTR16A LTR ERVL 5 95 -355 2390 132 3 8 chr2 31981346 31981716 -221274867 - L1PB1 LINE L1 -3 6148 5781 357 208 0 0 chr2 31981716 31981793 -221274790 + (TA)n Simple_repeat Simple_repeat 2 78 0 315 71 0 0 chr2 31981793 31981835 -221274748 - L1PB1 LINE L1 -360 5791 5750 15405 182 74 14 chr2 31981835 31987919 -221268664 - L1P5 LINE L1 -357 6510 90 2361 91 0 0 chr2 31988181 31988510 -221268073 - AluSc SINE Alu 0 329 1 392 310 64 23 chr2 31989018 31989189 -221267394 + MIR SINE MIR 20 197 -65 1938 144 14 7 chr2 31989359 31989650 -221266933 - AluJo SINE Alu -19 293 1 4430 135 20 0 chr2 31989650 31990345 -221266238 - L1MC1 LINE L1 -9 6324 5616 514 275 42 0 chr2 31990347 31990489 -221266094 + MIR SINE MIR 107 254 -8 852 204 34 24 chr2 31991761 31991967 -221264616 + MER3 DNA MER1_type 2 209 0 547 310 70 11 chr2 31992015 31992299 -221264284 + L2 LINE L2 2521 2821 -493 866 159 12 65 chr2 31992488 31992658 -221263925 - MER3 DNA MER1_type 0 209 49 379 272 109 105 chr2 31992682 31992995 -221263588 + L2 LINE L2 2958 3271 -1 204 312 55 9 chr2 31993119 31993228 -221263355 + MIR SINE MIR 100 213 -49 475 240 32 32 chr2 31993647 31993801 -221262782 + MER5A DNA MER1_type 10 163 -26 338 151 14 55 chr2 31995253 31995326 -221261257 - L1ME2 LINE L1 -2 6162 6093 238 187 165 55 chr2 31995521 31995612 -221260971 + L1ME4a LINE L1 5703 5802 -319 235 206 95 0 chr2 31995663 31995726 -221260857 + L1ME4a LINE L1 5983 6051 -70 2426 194 88 40 chr2 31996141 31996264 -221260319 + MLT1E2 LTR MaLR 7 123 -503 2266 110 10 0 chr2 31996264 31996565 -221260018 + AluSx SINE Alu 1 304 -8 2426 194 88 40 chr2 31996565 31997033 -221259550 + MLT1E2 LTR MaLR 123 626 0 234 335 51 61 chr2 31997131 31997328 -221259255 + L2 LINE L2 3075 3269 -3 315 322 75 37 chr2 31997607 31997902 -221258681 + L1MEd LINE L1 12 317 -5802 2318 223 87 49 chr2 31997933 31998645 -221257938 + MER21B LTR ERV1 12 750 -113 207 226 0 32 chr2 31999091 31999153 -221257430 - MIR SINE MIR -10 252 193 453 276 39 108 chr2 31999264 31999597 -221256986 + MLT1I LTR MaLR 94 403 -6 615 266 78 29 chr2 31999610 31999956 -221256627 + L1MEd LINE L1 895 1257 -4862 229 230 40 70 chr2 32000080 32000180 -221256403 + L1M2 LINE L1 2440 2536 -4313 2391 217 53 48 chr2 32001243 32001516 -221255067 - L1ME3A LINE L1 -5 6165 5895 1459 176 3 83 chr2 32001516 32001709 -221254874 - AluJb SINE Alu -14 298 140 1855 141 58 0 chr2 32001709 32002000 -221254583 + AluSg SINE Alu 1 308 -2 1459 176 3 83 chr2 32002000 32002130 -221254453 - AluJb SINE Alu -172 140 1 2391 217 53 48 chr2 32002130 32002569 -221254014 - L1ME3A LINE L1 -275 5895 5449 1145 200 5 9 chr2 32003392 32003607 -221252976 - MER20 DNA MER1_type -5 214 1 413 267 123 14 chr2 32004115 32004261 -221252322 - LTR16A1 LTR ERVL -295 162 1 1127 190 18 5 chr2 32004399 32004620 -221251963 - AluJo SINE Alu -3 309 86 296 272 89 9 chr2 32004622 32004813 -221251770 - MIR SINE MIR -48 214 8 455 295 68 10 chr2 32006159 32006366 -221250217 - MIR SINE MIR -24 238 20 322 282 0 0 chr2 32006383 32006461 -221250122 + MIR SINE MIR 109 186 -76 449 250 9 9 chr2 32006973 32007081 -221249502 - MIR SINE MIR -65 197 90 419 317 75 0 chr2 32008401 32008562 -221248021 + MIR3 SINE MIR 21 193 -15 195 310 42 0 chr2 32009326 32009397 -221247186 + MIR SINE MIR 140 213 -49 234 0 0 0 chr2 32010134 32010160 -221246423 + (TG)n Simple_repeat Simple_repeat 2 27 0 289 279 67 42 chr2 32010586 32010751 -221245832 - MIR3 SINE MIR -3 205 37 1790 174 16 20 chr2 32010787 32011092 -221245491 - AluJo SINE Alu -6 306 3 331 318 131 0 chr2 32012104 32012211 -221244372 - L2 LINE L2 0 3272 3152 423 330 11 16 chr2 32014238 32014420 -221242163 + MER5A DNA MER1_type 9 189 0 2231 123 0 3 chr2 32014638 32014948 -221241635 - AluSx SINE Alu -3 309 1 208 276 40 0 chr2 32016174 32016250 -221240333 + L2 LINE L2 3194 3272 0 2264 123 0 0 chr2 32016383 32016693 -221239890 - AluSx SINE Alu -2 310 1 1428 215 45 33 chr2 32017655 32017990 -221238593 + MER58B DNA MER1_type 2 340 -1 483 133 29 0 chr2 32019209 32019314 -221237269 + (TA)n Simple_repeat Simple_repeat 2 109 0 245 206 14 14 chr2 32019362 32019435 -221237148 + L1MCa LINE L1 1995 2067 -4359 356 217 39 72 chr2 32019444 32019624 -221236959 + (CATATA)n Simple_repeat Simple_repeat 4 177 0 * 407 249 35 12 chr2 32019505 32019674 -221236909 + (TA)n Simple_repeat Simple_repeat 2 174 0 209 197 16 0 chr2 32019715 32019776 -221236807 + (CATATA)n Simple_repeat Simple_repeat 3 64 0 212 286 0 0 chr2 32019792 32019855 -221236728 + (CATA)n Simple_repeat Simple_repeat 1 63 0 350 307 104 5 chr2 32020808 32021000 -221235583 + L2 LINE L2 2567 2777 -537 439 254 49 0 chr2 32021436 32021558 -221235025 - MIR SINE MIR -26 236 109 243 272 0 0 chr2 32021595 32021676 -221234907 + (TG)n Simple_repeat Simple_repeat 2 82 0 381 301 41 0 chr2 32023961 32024107 -221232476 - MIR3 SINE MIR -15 193 42 229 244 0 70 chr2 32025180 32025266 -221231317 - MIR SINE MIR -73 189 110 2398 68 3 0 chr2 32026292 32026584 -221229999 - AluSc SINE Alu -3 306 14 3666 237 94 62 chr2 32026761 32028329 -221228254 - HAL1 LINE L1 -10 2497 880 180 367 0 0 chr2 32028459 32028508 -221228075 + L2 LINE L2 3137 3185 -87 884 165 0 0 chr2 32028811 32028944 -221227639 - AluSq/x SINE Alu -180 133 1 9589 212 62 36 chr2 32029320 32032219 -221224364 + L1MDa LINE L1 54 2874 -3666 1456 214 144 42 chr2 32032219 32032677 -221223906 + MLT1D LTR MaLR 1 505 0 9589 212 62 36 chr2 32032677 32033416 -221223167 + L1MDa LINE L1 2874 3788 -2752 1545 176 27 40 chr2 32033416 32033790 -221222793 + L1MA3 LINE L1 5937 6305 0 9589 212 62 36 chr2 32033790 32033894 -221222689 + L1MDa LINE L1 3788 3888 -2652 1948 84 3 1 chr2 32033918 32034195 -221222388 + L1P LINE L1 2545 2825 -3321 2794 221 46 34 chr2 32034207 32034997 -221221586 + L1MDa LINE L1 3901 4699 -1841 635 222 108 54 chr2 32034996 32035181 -221221402 + L1MB7 LINE L1 5416 5610 -564 * 209 125 0 25 chr2 32035276 32035316 -221221267 + (CAAAA)n Simple_repeat Simple_repeat 4 42 0 1119 211 76 58 chr2 32036019 32036139 -221220444 + Tigger7 DNA MER2_type 1 117 -2370 2359 94 0 10 chr2 32036139 32036448 -221220135 + AluSx SINE Alu 1 306 -6 1119 211 76 58 chr2 32036448 32036866 -221219717 + Tigger7 DNA MER2_type 117 2487 0 2069 232 59 16 chr2 32038695 32038953 -221217630 + L1MB7 LINE L1 5587 5832 -352 2229 116 7 0 chr2 32038953 32039256 -221217327 + AluSx SINE Alu 1 305 -7 2069 232 59 16 chr2 32039256 32039570 -221217013 + L1MB7 LINE L1 5832 6184 0 225 264 85 19 chr2 32039672 32039778 -221216805 - L1ME4a LINE L1 -110 6011 5899 307 183 113 0 chr2 32042415 32042486 -221214097 - MIR3 SINE MIR -45 163 85 289 267 192 14 chr2 32042510 32042656 -221213927 - MIR SINE MIR -31 231 60 288 248 172 14 chr2 32044311 32044456 -221212127 - L3 LINE CR1 -1 1576 1409 288 262 255 0 chr2 32044760 32044909 -221211674 + MER117 DNA MER1_type 5 191 -6 26 0 0 0 chr2 32045235 32045261 -221211322 + AT_rich Low_complexity Low_complexity 1 26 0 214 273 26 52 chr2 32046561 32046638 -221209945 - L2 LINE L2 -8 3305 3231 860 135 0 30 chr2 32046642 32046775 -221209808 + FLAM_C SINE Alu 2 130 -3 391 296 30 9 chr2 32047204 32047346 -221209237 - MIR SINE MIR -31 177 47 652 197 8 0 chr2 32047878 32048005 -221208578 + MIR SINE MIR 45 172 -90 642 212 84 80 chr2 32048504 32048880 -221207703 + L1ME4a LINE L1 5704 6077 -44 865 249 11 51 chr2 32048938 32049211 -221207372 - MIR SINE MIR 0 262 1 997 217 77 0 chr2 32049212 32049419 -221207164 + MER58A DNA MER1_type 1 223 -1 324 0 0 0 chr2 32049456 32049492 -221207091 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 186 346 0 10 chr2 32050121 32050222 -221206361 + L2 LINE L2 2897 2996 -276 305 245 19 28 chr2 32050232 32050338 -221206245 + L1ME4a LINE L1 5837 5941 -180 211 203 43 29 chr2 32050348 32050417 -221206166 + (TAGA)n Simple_repeat Simple_repeat 2 71 0 289 250 24 40 chr2 32050438 32050562 -221206021 + L1ME4a LINE L1 5942 6063 -58 187 311 33 0 chr2 32050711 32050772 -221205811 + L2 LINE L2 3247 3309 -4 1182 108 0 0 chr2 32050905 32051093 -221205490 - AluSp/q SINE Alu 0 344 157 288 253 33 11 chr2 32051573 32051664 -221204919 + MIR SINE MIR 48 140 -122 578 291 44 35 chr2 32051694 32051921 -221204662 - MIR SINE MIR 0 262 34 360 253 6 17 chr2 32052021 32052195 -221204388 + (TAG)n Simple_repeat Simple_repeat 1 172 0 265 333 0 11 chr2 32052218 32052305 -221204278 + (CAG)n Simple_repeat Simple_repeat 1 86 0 571 211 12 0 chr2 32052315 32052481 -221204102 + (TAG)n Simple_repeat Simple_repeat 1 168 0 189 175 0 0 chr2 32052515 32052555 -221204028 + (TAA)n Simple_repeat Simple_repeat 2 41 0 272 286 0 7 chr2 32052590 32052737 -221203846 + (TAG)n Simple_repeat Simple_repeat 2 147 0 573 239 0 0 chr2 32052757 32052937 -221203646 + (TAG)n Simple_repeat Simple_repeat 1 180 0 1588 186 30 20 chr2 32053672 32054142 -221202441 + AluJb SINE Alu 3 475 0 348 242 61 20 chr2 32055454 32055553 -221201030 - MIR SINE MIR -74 188 86 1863 189 58 58 chr2 32056079 32056218 -221200365 + MER63B DNA MER1_type 1 139 -923 2440 187 77 4 chr2 32056218 32056737 -221199846 + MER68 LTR ERV1 4 560 -2 1863 189 58 58 chr2 32056737 32056914 -221199669 + MER63B DNA MER1_type 139 320 -742 2181 130 0 0 chr2 32056914 32057213 -221199370 - AluSx SINE Alu -7 305 7 1863 189 58 58 chr2 32057213 32057330 -221199253 + MER63B DNA MER1_type 319 435 -1 21 36 0 0 chr2 32058305 32058333 -221198250 + AT_rich Low_complexity Low_complexity 1 28 0 473 170 57 60 chr2 32058701 32058839 -221197744 + MER5A DNA MER1_type 25 189 0 380 333 31 8 chr2 32059194 32059323 -221197260 - MIR3 SINE MIR -67 141 10 223 176 24 240 chr2 32059329 32059454 -221197129 + MER5B DNA MER1_type 75 172 -6 345 24 0 0 chr2 32060043 32060085 -221196498 + (TG)n Simple_repeat Simple_repeat 2 43 0 687 187 47 0 chr2 32060111 32060261 -221196322 - MIR SINE MIR -32 230 74 566 175 58 42 chr2 32061015 32061135 -221195448 + FRAM SINE Alu 42 163 -13 332 309 32 8 chr2 32061871 32061994 -221194589 + L2 LINE L2 3142 3267 -5 330 268 55 8 chr2 32062013 32062140 -221194443 - MIR SINE MIR -70 192 60 246 289 29 48 chr2 32062649 32062753 -221193830 - MIR SINE MIR -76 186 85 722 130 0 8 chr2 32062846 32062969 -221193614 + (GGAA)n Simple_repeat Simple_repeat 2 123 0 216 0 0 0 chr2 32063315 32063339 -221193244 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 231 311 93 71 chr2 32063460 32063643 -221192940 - L2 LINE L2 -91 3181 2995 192 77 0 0 chr2 32065396 32065422 -221191161 + (GAAA)n Simple_repeat Simple_repeat 4 29 0 5773 199 36 22 chr2 32065770 32067765 -221188818 - L1MC1 LINE L1 -5 6608 4592 * 11670 191 60 21 chr2 32067761 32068319 -221188264 - L1MC1 LINE L1 -2524 3902 3367 2250 104 0 0 chr2 32068319 32068644 -221187939 - AluSg SINE Alu 0 327 3 11670 191 60 21 chr2 32068644 32071839 -221184744 - L1MC1 LINE L1 -3059 3367 2 246 303 119 28 chr2 32072393 32072516 -221184067 - MIR SINE MIR -12 250 140 544 77 26 0 chr2 32072516 32072594 -221183989 + MADE1 DNA Mariner 1 80 0 246 303 119 28 chr2 32072594 32072688 -221183895 - MIR SINE MIR -122 140 13 270 258 90 58 chr2 32073756 32073911 -221182672 + L2 LINE L2 2937 3096 -176 593 293 39 0 chr2 32074731 32074939 -221181644 + MIR SINE MIR 43 258 -4 669 229 146 4 chr2 32074996 32075236 -221181347 - L2 LINE L2 -811 2503 2230 2014 136 61 12 chr2 32075495 32075841 -221180742 + THE1B LTR MaLR 1 363 -1 1908 68 0 4 chr2 32076157 32076391 -221180192 - AluY SINE Alu -7 304 72 313 291 60 8 chr2 32076555 32076672 -221179911 - MER113 DNA MER1_type? -115 406 284 294 331 38 15 chr2 32077788 32077921 -221178662 - L2 LINE L2 0 3272 3137 965 264 19 19 chr2 32078096 32078361 -221178222 + MER93a LTR ERV1 128 392 -10 366 303 34 8 chr2 32078382 32078501 -221178082 - L2 LINE L2 -165 3107 2986 216 260 0 0 chr2 32078865 32078915 -221177668 + (CA)n Simple_repeat Simple_repeat 1 50 0 23 33 0 0 chr2 32080515 32080545 -221176038 + AT_rich Low_complexity Low_complexity 1 30 0 366 258 94 31 chr2 32081041 32081200 -221175383 + MIR SINE MIR 94 262 0 2391 153 75 5 chr2 32082000 32082400 -221174183 + MSTA LTR MaLR 1 428 0 197 375 95 13 chr2 32083945 32084177 -221172406 + L2 LINE L2 2712 2962 -352 618 235 162 0 chr2 32084407 32084611 -221171972 + L1MC4 LINE L1 6979 7215 -827 5523 99 11 5 chr2 32084611 32085366 -221171217 + L1MA2 LINE L1 5546 6304 0 4718 143 72 19 chr2 32085459 32086324 -221170259 + L1MB3 LINE L1 5270 6180 -3 2157 235 69 25 chr2 32086311 32086926 -221169657 + L1MC4 LINE L1 7182 7831 -211 * 2149 103 7 3 chr2 32086926 32087227 -221169356 + AluSg1 SINE Alu 1 302 -7 2157 235 69 25 chr2 32087227 32087296 -221169287 + L1MC4 LINE L1 7831 7896 -146 21 82 0 0 chr2 32087308 32087357 -221169226 + AT_rich Low_complexity Low_complexity 1 49 0 497 242 8 0 chr2 32087405 32087533 -221169050 + L1MC4 LINE L1 7914 8042 0 225 347 0 28 chr2 32087584 32087656 -221168927 - L2 LINE L2 0 3272 3203 221 377 54 15 chr2 32087716 32087846 -221168737 + L2 LINE L2 3122 3256 -16 353 75 19 0 chr2 32087857 32087910 -221168673 + (TGAG)n Simple_repeat Simple_repeat 2 55 0 2319 35 0 0 chr2 32088308 32088567 -221168016 + L1PA5 LINE L1 5895 6153 -1 218 367 11 0 chr2 32089056 32089146 -221167437 - L3 LINE CR1 -5 1572 1482 261 0 0 0 chr2 32091660 32091689 -221164894 + (A)n Simple_repeat Simple_repeat 1 29 0 482 158 25 125 chr2 32091950 32092070 -221164513 - MER81 DNA DNA -2 112 5 2102 121 7 0 chr2 32092086 32092376 -221164207 + AluSx SINE Alu 1 292 -20 887 174 54 27 chr2 32092416 32092600 -221163983 + MER20 DNA MER1_type 31 219 0 338 270 99 36 chr2 32092802 32092966 -221163617 + MIR SINE MIR 11 183 -25 1184 195 46 4 chr2 32093274 32093536 -221163047 - L1MA8 LINE L1 -3 6288 6016 938 131 0 0 chr2 32093537 32093667 -221162916 - AluSx SINE Alu -37 275 146 990 68 0 0 chr2 32093847 32093964 -221162619 - AluSx SINE Alu -170 142 26 4373 223 49 42 chr2 32093968 32096228 -221160355 - L1 LINE L1 -3664 3442 1478 1937 161 10 82 chr2 32096233 32096625 -221159958 - L1 LINE L1 -6666 364 1 431 264 28 56 chr2 32097546 32097690 -221158893 - MIR SINE MIR -56 206 67 356 301 57 8 chr2 32097827 32097950 -221158633 + L2 LINE L2 3136 3264 -8 738 300 60 23 chr2 32098713 32099149 -221157434 + MLT1J1 LTR MaLR 1 446 0 333 243 72 36 chr2 32099150 32099261 -221157322 + L2 LINE L2 3199 3313 0 208 186 0 68 chr2 32099392 32099451 -221157132 + T-rich Low_complexity Low_complexity 4 58 0 470 316 68 26 chr2 32099476 32099666 -221156917 + MIR3 SINE MIR 3 200 -8 189 207 0 0 chr2 32099925 32099954 -221156629 - L2 LINE L2 -37 3235 3207 2375 172 71 0 chr2 32100094 32100489 -221156094 + MSTB LTR MaLR 4 426 0 458 263 172 25 chr2 32101467 32101665 -221154918 - MIR SINE MIR -7 255 29 204 143 24 24 chr2 32103194 32103236 -221153347 + MIR3 SINE MIR 164 205 -3 494 31 16 0 chr2 32103245 32103309 -221153274 + (TG)n Simple_repeat Simple_repeat 2 66 0 2067 149 0 0 chr2 32103483 32103784 -221152799 - AluSx SINE Alu -9 303 3 1470 313 64 37 chr2 32104070 32104745 -221151838 + MER115 DNA AcHobo 1 693 0 268 315 120 32 chr2 32104968 32105184 -221151399 + L2 LINE L2 2826 3060 -212 293 292 67 17 chr2 32107588 32107708 -221148875 + MIR SINE MIR 58 183 -79 2479 75 0 3 chr2 32108066 32108373 -221148210 + AluY SINE Alu 1 306 -5 234 208 94 0 chr2 32108630 32108683 -221147900 - MLT1J1 LTR MaLR -285 161 104 498 321 153 10 chr2 32108706 32109014 -221147569 - MLT1I LTR MaLR -3 406 55 1616 303 109 84 chr2 32109356 32111541 -221145042 - L2 LINE L2 -4 3268 1012 1653 175 101 27 chr2 32111670 32112035 -221144548 - L1ME2 LINE L1 -19 6145 5754 1252 245 111 10 chr2 32112036 32112536 -221144047 - L1ME2 LINE L1 -536 5628 5083 12112 22 0 0 chr2 32112536 32113925 -221142658 - L1PA3 LINE L1 -948 5198 3810 8002 32 2 0 chr2 32113925 32114944 -221141639 + L1PA3 LINE L1 5185 6205 0 2288 209 102 39 chr2 32114976 32115179 -221141404 - L1ME2 LINE L1 -1395 4751 4562 2480 55 7 3 chr2 32115179 32115489 -221141094 + AluY SINE Alu 1 311 0 2288 209 102 39 chr2 32115489 32115935 -221140648 - L1ME2 LINE L1 -1584 4562 4061 2316 98 0 28 chr2 32116381 32116699 -221139884 + AluSx SINE Alu 1 309 -3 285 332 159 5 chr2 32116942 32117162 -221139421 - MIR SINE MIR -5 257 4 338 298 32 0 chr2 32117224 32117318 -221139265 + L2 LINE L2 3150 3246 -26 345 298 43 39 chr2 32117554 32117836 -221138747 - L1ME2 LINE L1 -3754 2392 2110 3313 227 22 11 chr2 32118158 32118964 -221137619 + L1 LINE L1 2396 3210 -2936 2001 170 56 17 chr2 32118968 32119327 -221137256 - MSTA LTR MaLR -54 374 2 21 36 0 0 chr2 32119541 32119569 -221137014 + AT_rich Low_complexity Low_complexity 1 28 0 4394 103 31 5 chr2 32119570 32120181 -221136402 - L1PA14 LINE L1 -3 6158 5532 593 91 1 0 chr2 32120181 32120269 -221136314 + L1PA14 LINE L1 5451 5527 -634 5716 76 30 60 chr2 32120297 32121156 -221135427 + L1MA1 LINE L1 5468 6300 -2 305 177 51 13 chr2 32122124 32122203 -221134380 + MER103 DNA DNA 25 106 -60 2916 133 45 6 chr2 32122322 32122789 -221133794 - L1MB3 LINE L1 0 6183 5699 2965 79 3 0 chr2 32124835 32125189 -221131394 + THE1A LTR MaLR 1 355 0 272 322 55 50 chr2 32125547 32125749 -221130834 - LTR67 LTR ERVL -14 543 341 20148 169 28 9 chr2 32125839 32127565 -221129018 + L1MA2 LINE L1 13 1705 -5860 876 69 46 17 chr2 32127565 32127738 -221128845 + GA-rich Low_complexity Low_complexity 1 178 0 20148 169 28 9 chr2 32127738 32129464 -221127119 + L1MA2 LINE L1 1705 3531 -4034 8648 129 42 21 chr2 32129465 32131156 -221125427 - MER52-int LTR ERV1 -2097 3849 2620 4087 139 16 27 chr2 32131160 32132310 -221124273 - MER52-int LTR ERV1 -4004 1451 632 320 250 0 13 chr2 32132310 32132386 -221124197 - MER52-int LTR ERV1 -3548 3657 3583 4386 204 39 46 chr2 32132402 32133548 -221123035 - MER52-int LTR ERV1 -436 4781 411 2634 169 97 12 chr2 32133764 32134661 -221121922 - LTR28 LTR ERV1 0 1020 1 13726 158 11 16 chr2 32134661 32138583 -221118000 + L1MA2 LINE L1 3823 7723 0 371 280 34 42 chr2 32138909 32139054 -221117529 - MIR SINE MIR -62 146 6 548 296 133 4 chr2 32139565 32139734 -221116849 - L2 LINE L2 -470 2844 2637 378 0 0 0 chr2 32139734 32139776 -221116807 + (TG)n Simple_repeat Simple_repeat 2 43 0 548 296 133 4 chr2 32139776 32139832 -221116751 - L2 LINE L2 -677 2637 2590 1241 219 72 42 chr2 32139841 32140288 -221116295 + MLT1C LTR MaLR 6 465 -2 1532 214 76 7 chr2 32140291 32140756 -221115827 - MLT1F LTR MaLR 0 542 1 1892 285 282 18 chr2 32140756 32142080 -221114503 - L2 LINE L2 -721 2593 921 949 221 28 9 chr2 32142175 32142392 -221114191 + MER58A DNA MER1_type 1 221 -3 534 154 115 0 chr2 32142598 32142702 -221113881 + FLAM_A SINE Alu 22 137 -5 849 186 9 38 chr2 32142726 32142936 -221113647 - MER96B DNA MER1_type? 0 417 214 2514 103 31 14 chr2 32144064 32144422 -221112161 + THE1B LTR MaLR 1 364 0 2077 94 0 0 chr2 32144833 32145108 -221111475 - AluY SINE Alu -6 305 31 761 313 63 0 chr2 32145247 32145515 -221111068 + HERVL LTR ERVL 2996 3280 -2374 1594 339 79 20 chr2 32145736 32146790 -221109793 - ERVL LTR ERVL -3264 2500 1348 2272 123 3 0 chr2 32146790 32147100 -221109483 - AluSx SINE Alu -1 311 1 1594 339 79 20 chr2 32147100 32147392 -221109191 - ERVL LTR ERVL -4416 1348 1075 377 235 17 62 chr2 32147416 32147595 -221108988 - LTR33A LTR ERVL 0 523 353 2093 158 31 21 chr2 32147595 32147748 -221108835 - MLT1B LTR MaLR 0 390 240 2116 193 68 36 chr2 32147748 32148250 -221108333 - MLT2B1 LTR ERVL 0 520 3 2093 158 31 21 chr2 32148250 32148481 -221108102 - MLT1B LTR MaLR -150 240 2 228 329 49 0 chr2 32148814 32148957 -221107626 - LTR33A LTR ERVL -371 152 3 548 326 42 34 chr2 32148972 32149211 -221107372 - L2 LINE L2 -266 3047 2807 385 257 22 52 chr2 32149227 32149363 -221107220 + MER94 DNA DNA 3 134 0 833 252 77 15 chr2 32149363 32149637 -221106946 - L2 LINE L2 -513 2801 2511 1285 313 47 27 chr2 32149655 32150252 -221106331 + L2 LINE L2 2115 2723 -591 247 285 99 29 chr2 32152376 32152548 -221104035 - L2 LINE L2 -1152 2162 1979 859 230 75 5 chr2 32152573 32152773 -221103810 + MLT1F1 LTR MaLR 354 567 0 261 302 94 55 chr2 32152774 32153009 -221103574 - L2 LINE L2 -1427 1887 1644 474 350 63 5 chr2 32154499 32154722 -221101861 - MIR SINE MIR -26 236 1 17402 175 15 10 chr2 32155276 32162553 -221094030 - L1PA14 LINE L1 -11 7588 11 570 234 8 8 chr2 32162583 32162711 -221093872 - FLAM_C SINE Alu -4 129 2 755 326 70 19 chr2 32163065 32163877 -221092706 - L1M4 LINE L1 -1453 4693 3840 2186 134 3 6 chr2 32164250 32164563 -221092020 - AluSx SINE Alu 0 312 1 2138 130 0 0 chr2 32164572 32164864 -221091719 - AluSg SINE Alu -18 292 1 23 33 0 0 chr2 32164906 32164936 -221091647 + AT_rich Low_complexity Low_complexity 1 30 0 7193 92 21 36 chr2 32165020 32168322 -221088261 + L1PA6 LINE L1 12 3176 -2978 3464 88 2 0 chr2 32168322 32168786 -221087797 + L1PA5 LINE L1 5688 6153 -1 7193 92 21 36 chr2 32168786 32171719 -221084864 + L1PA6 LINE L1 3176 6152 -2 345 241 152 25 chr2 32171725 32171883 -221084700 - L1M4 LINE L1 -2867 3279 3102 733 215 107 74 chr2 32171883 32172246 -221084337 + L1ME2 LINE L1 5685 6059 -105 286 103 0 0 chr2 32172246 32172285 -221084298 - THE1B LTR MaLR -2 353 315 41477 39 11 1 chr2 32172285 32178374 -221078209 + L1PA3 LINE L1 5 6150 -5 21 71 0 0 chr2 32178374 32178416 -221078167 + AT_rich Low_complexity Low_complexity 1 42 0 2135 91 29 44 chr2 32178416 32178757 -221077826 - THE1B LTR MaLR -28 336 1 498 201 13 3 chr2 32178757 32178877 -221077706 + L1ME2 LINE L1 6052 6334 0 * 1534 213 64 7 chr2 32178873 32179281 -221077302 + L1ME2 LINE L1 5428 5858 -306 1073 182 13 17 chr2 32181485 32181716 -221074867 - MER96B DNA MER1_type? -17 400 171 435 283 27 33 chr2 32182167 32182351 -221074232 + L1ME1 LINE L1 346 528 -5868 1652 260 67 56 chr2 32182365 32183913 -221072670 + L1ME1 LINE L1 1273 2848 -3558 1014 141 20 0 chr2 32183928 32184183 -221072400 - L1M2 LINE L1 -743 5403 5190 5491 238 40 39 chr2 32184210 32185000 -221071583 + L1ME1 LINE L1 3420 4207 -2219 233 57 29 0 chr2 32185000 32185035 -221071548 + (CA)n Simple_repeat Simple_repeat 1 36 0 5491 238 40 39 chr2 32185035 32186307 -221070276 + L1ME1 LINE L1 4207 5552 -874 1572 169 61 4 chr2 32186307 32186586 -221069997 + AluJo SINE Alu 7 301 -11 5491 238 40 39 chr2 32186586 32187225 -221069358 + L1ME1 LINE L1 5552 6188 -238 7098 124 54 14 chr2 32187241 32188487 -221068096 - HSMAR2 DNA Mariner -4 1298 4 535 273 44 0 chr2 32188503 32188686 -221067897 + L1ME1 LINE L1 6217 6407 -19 301 287 108 23 chr2 32189294 32189423 -221067160 - L3 LINE CR1 -11 1566 1427 2209 137 129 3 chr2 32189989 32190369 -221066214 - MSTA LTR MaLR 0 428 1 267 54 0 0 chr2 32190546 32190583 -221066000 + (TG)n Simple_repeat Simple_repeat 2 38 0 2452 69 0 7 chr2 32190605 32190908 -221065675 - AluY SINE Alu -10 301 1 1471 263 55 23 chr2 32191403 32192135 -221064448 - L2 LINE L2 -13 3300 2554 1423 244 90 35 chr2 32192936 32193627 -221062956 - L1MCc LINE L1 -4888 1535 964 473 233 0 0 chr2 32193627 32193730 -221062853 - MER81 DNA DNA -6 108 6 227 255 53 11 chr2 32193735 32193829 -221062754 - L1MCc LINE L1 -6070 353 256 305 289 56 52 chr2 32193882 32194131 -221062452 - L1MCc LINE L1 -5525 898 649 1063 99 3 2 chr2 32194478 32194782 -221061801 + THE1A LTR MaLR 1 355 0 11538 100 11 0 chr2 32194782 32196342 -221060241 + THE1A-int LTR MaLR 1 1578 -2 2578 52 86 0 chr2 32196344 32196671 -221059912 + THE1A LTR MaLR 1 355 0 244 253 12 12 chr2 32196699 32196782 -221059801 - L1MCc LINE L1 -5968 455 373 503 250 0 0 chr2 32196788 32196900 -221059683 - MER81 DNA DNA 0 114 3 852 257 109 3 chr2 32196902 32197206 -221059377 - L1MCc LINE L1 -6070 353 18 344 280 120 0 chr2 32199375 32199500 -221057083 + MIR3 SINE MIR 62 201 -7 489 273 60 28 chr2 32200838 32201054 -221055529 - Charlie8 DNA MER1_type -2194 223 1 615 183 13 20 chr2 32202364 32202517 -221054066 + L1MB4 LINE L1 6029 6180 0 1865 201 25 38 chr2 32202658 32203131 -221053452 + MLT1C LTR MaLR 1 467 0 188 182 57 125 chr2 32204370 32204411 -221052172 - MER5B DNA MER1_type 0 178 144 1805 146 14 4 chr2 32204411 32204725 -221051858 + AluSx SINE Alu 1 317 0 188 182 57 125 chr2 32204725 32204770 -221051813 - MER5B DNA MER1_type -34 144 97 383 270 118 61 chr2 32207850 32208146 -221048437 + MLT1L LTR MaLR 223 535 -80 342 0 0 0 chr2 32208286 32208324 -221048259 + (CA)n Simple_repeat Simple_repeat 1 38 0 294 241 11 11 chr2 32208324 32208411 -221048172 - L1MC4a LINE L1 -1879 5929 5843 832 292 35 36 chr2 32208777 32208890 -221047693 - L2 LINE L2 -243 3070 2958 1339 131 63 23 chr2 32208890 32209111 -221047472 - MER30 DNA MER1_type 0 230 1 832 292 35 36 chr2 32209111 32209526 -221047057 - L2 LINE L2 -355 2958 2542 24 32 0 0 chr2 32209915 32209946 -221046637 + AT_rich Low_complexity Low_complexity 1 31 0 230 342 13 26 chr2 32210073 32210149 -221046434 - MIR SINE MIR -102 106 32 183 246 0 0 chr2 32210521 32210578 -221046005 + (CA)n Simple_repeat Simple_repeat 2 58 0 2385 95 0 0 chr2 32210953 32211249 -221045334 - AluSg SINE Alu -14 296 1 240 299 276 0 chr2 32211798 32211932 -221044651 + MIR SINE MIR 12 182 -80 649 220 126 27 chr2 32212168 32212522 -221044061 - MLT1J2 LTR MaLR 0 450 20 3067 267 102 29 chr2 32213187 32213635 -221042948 + L2 LINE L2 1712 2126 -1188 1045 201 115 75 chr2 32213635 32213983 -221042600 + MLT1A1 LTR MaLR 4 365 0 3067 267 102 29 chr2 32213983 32214629 -221041954 + L2 LINE L2 2126 2886 -428 713 286 97 24 chr2 32214608 32214898 -221041685 + L2 LINE L2 3001 3311 -2 * 2581 264 64 24 chr2 32214977 32215911 -221040672 + L1MDa LINE L1 19 1139 -5401 1260 181 53 51 chr2 32215909 32216396 -221040187 + L1MDa LINE L1 2163 2650 -3890 * 5049 157 9 34 chr2 32216469 32217451 -221039132 + L1M4c LINE L1 17 974 -5410 3539 191 42 14 chr2 32217432 32218145 -221038438 + L1MB3 LINE L1 12 744 -6821 * 532 124 11 0 chr2 32218146 32218235 -221038348 + L1MA3 LINE L1 6214 6303 -2 993 193 15 20 chr2 32218241 32218460 -221038123 + AluJo SINE Alu 87 304 0 6233 214 83 27 chr2 32218460 32222300 -221034283 + L1MB3 LINE L1 2136 5761 -1804 2515 159 9 2 chr2 32222300 32222741 -221033842 + L1PA16 LINE L1 5723 6166 0 2232 91 0 3 chr2 32222744 32223066 -221033517 + AluSp SINE Alu 1 321 0 6233 214 83 27 chr2 32223066 32223156 -221033427 + L1MB3 LINE L1 5762 6290 -1275 368 141 16 0 chr2 32223156 32223220 -221033363 + MLT2B3 LTR ERVL 1 65 -489 1740 175 70 96 chr2 32223322 32223768 -221032815 + MLT2B3 LTR ERVL 75 508 -46 255 93 0 0 chr2 32223792 32223835 -221032748 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 299 161 0 0 chr2 32223844 32223900 -221032683 + MLT2B3 LTR ERVL 465 520 0 4093 173 56 13 chr2 32223900 32225011 -221031572 + L1MB3 LINE L1 6286 7451 -151 1981 113 0 0 chr2 32225011 32225325 -221031258 - AluY SINE Alu 0 330 17 4093 173 56 13 chr2 32225325 32225482 -221031101 + L1MB3 LINE L1 7451 7600 -2 1587 262 25 21 chr2 32225500 32226111 -221030472 + L1MC/D LINE L1 2315 2927 -3219 3047 245 80 36 chr2 32226181 32227280 -221029303 + L1MC/D LINE L1 3505 4674 -1472 1799 181 16 11 chr2 32227280 32227644 -221028939 - MER47A DNA MER2_type 0 366 1 3047 245 80 36 chr2 32227644 32227885 -221028698 + L1MC/D LINE L1 4674 4903 -1243 532 203 8 0 chr2 32227890 32228013 -221028570 + L1MC/D LINE L1 5052 5175 -971 686 299 55 30 chr2 32228016 32228380 -221028203 + L1M3c LINE L1 523 895 -5768 2527 252 21 13 chr2 32228496 32229583 -221027000 + L1M3c LINE L1 1287 2360 -4373 230 192 0 0 chr2 32229587 32229639 -221026944 + L1MC/D LINE L1 5774 5825 -417 519 17 0 0 chr2 32230854 32230914 -221025669 + (TG)n Simple_repeat Simple_repeat 2 61 0 300 324 10 29 chr2 32230925 32231027 -221025556 - MIR SINE MIR -72 136 37 442 280 101 31 chr2 32231433 32231690 -221024893 + MLT1K LTR MaLR 311 585 -3 741 200 8 0 chr2 32231754 32231884 -221024699 + FLAM_A SINE Alu 1 131 -2 631 184 0 0 chr2 32231782 32231891 -221024692 + FLAM_A SINE Alu 30 138 -4 1160 224 135 70 chr2 32232258 32232732 -221023851 + MLT1D LTR MaLR 1 505 0 1181 238 24 4 chr2 32232813 32233065 -221023518 - MIR SINE MIR -4 258 2 314 281 34 34 chr2 32233082 32233260 -221023323 + MER5B DNA MER1_type 1 178 0 1411 194 30 33 chr2 32234226 32234587 -221021996 - MLT1C LTR MaLR -1 466 107 307 263 26 0 chr2 32234587 32234663 -221021920 + Tigger3(Golem) DNA MER2_type 1 78 -2951 * 1244 166 0 0 chr2 32234655 32234866 -221021717 + Tigger3(Golem) DNA MER2_type 2816 3026 -3 369 180 135 0 chr2 32234866 32234950 -221021633 - MLT1C LTR MaLR -366 101 6 396 0 0 0 chr2 32235766 32235810 -221020773 + (CA)n Simple_repeat Simple_repeat 1 44 0 21 0 0 0 chr2 32237721 32237742 -221018841 + AT_rich Low_complexity Low_complexity 1 21 0 1494 120 52 4 chr2 32238176 32238443 -221018140 - L1MA3 LINE L1 -2 6303 6024 1204 122 11 0 chr2 32238564 32238753 -221017830 + L1PA16 LINE L1 5954 6144 -22 3420 263 93 18 chr2 32239255 32240778 -221015805 + L1ME LINE L1 37 1672 -4724 2983 247 38 34 chr2 32240779 32242483 -221014100 + L1ME LINE L1 1724 3411 -2804 315 305 45 32 chr2 32243000 32243154 -221013429 - L1ME LINE L1 -328 5793 5638 216 0 0 0 chr2 32243363 32243387 -221013196 + (TG)n Simple_repeat Simple_repeat 2 25 0 435 245 12 20 chr2 32243454 32243680 -221012903 - L1ME1 LINE L1 -105 6061 5678 3925 177 55 25 chr2 32243680 32245155 -221011428 - MER52A LTR ERV1 0 1755 1 1609 211 25 0 chr2 32245155 32245510 -221011073 - L1ME1 LINE L1 -488 5678 5315 1069 186 30 89 chr2 32245516 32245854 -221010729 + L1ME LINE L1 4934 5251 -964 9535 159 33 1 chr2 32245858 32248384 -221008199 + L1PA15 LINE L1 3540 6144 -21 635 163 14 7 chr2 32248399 32248540 -221008043 + L1ME LINE L1 5243 5384 -831 263 309 159 0 chr2 32249097 32249223 -221007360 + MIR SINE MIR 111 256 -6 328 291 45 8 chr2 32250213 32250347 -221006236 + MIR3 SINE MIR 1 139 -69 972 207 140 0 chr2 32250748 32250941 -221005642 + MER58A DNA MER1_type 2 221 -3 204 282 214 0 chr2 32251202 32251333 -221005250 + MIR3 SINE MIR 19 177 -31 294 288 0 99 chr2 32251394 32251505 -221005078 - L2 LINE L2 -181 3091 2992 7284 26 0 0 chr2 32251928 32253088 -221003495 + L1HS LINE L1 4994 6153 -2 180 0 0 0 chr2 32253092 32253112 -221003471 + (A)n Simple_repeat Simple_repeat 1 20 0 412 256 41 8 chr2 32253342 32253463 -221003120 - L2 LINE L2 0 3313 3189 255 209 127 18 chr2 32253729 32253839 -221002744 + L1ME LINE L1 5655 5776 -414 40 59 0 0 chr2 32254150 32254218 -221002365 + AT_rich Low_complexity Low_complexity 1 68 0 642 276 82 30 chr2 32254254 32254486 -221002097 + MIR SINE MIR 1 244 -18 200 194 0 0 chr2 32255054 32255090 -221001493 + L2 LINE L2 3233 3268 -4 285 331 69 0 chr2 32255520 32255650 -221000933 + MIR SINE MIR 76 214 -48 21 0 0 0 chr2 32256379 32256400 -221000183 + GC_rich Low_complexity Low_complexity 1 21 0 221 348 69 29 chr2 32258502 32258706 -220997877 + L2 LINE L2 2191 2402 -912 468 264 135 16 chr2 32259188 32259381 -220997202 - MLT1H LTR MaLR -320 229 14 432 243 79 7 chr2 32259388 32259540 -220997043 - L1ME3A LINE L1 -19 6151 5989 342 115 0 0 chr2 32259543 32259604 -220996979 + (A)n Simple_repeat Simple_repeat 1 61 0 472 184 0 0 chr2 32259605 32259692 -220996891 - L1ME3A LINE L1 -190 5980 5894 1716 199 45 13 chr2 32259739 32260135 -220996448 - MER74A LTR ERVL -70 488 80 253 263 105 13 chr2 32260209 32260361 -220996222 + L1MEc LINE L1 660 825 -5571 559 282 62 46 chr2 32260367 32260672 -220995911 - MER21B LTR ERV1 -153 710 401 15294 159 69 20 chr2 32260672 32261953 -220994630 + L1M1 LINE L1 27 1244 -6321 1192 82 18 6 chr2 32261953 32262149 -220994434 - L1PB1 LINE L1 0 6151 5980 15294 159 69 20 chr2 32262149 32262950 -220993633 + L1M1 LINE L1 1244 2004 -5561 6467 72 10 12 chr2 32262950 32263842 -220992741 + L1PA8 LINE L1 5270 6159 -13 15294 159 69 20 chr2 32263842 32264767 -220991816 + L1M1 LINE L1 2004 3183 -4382 2444 106 21 5 chr2 32264774 32265152 -220991431 + L1PB1 LINE L1 1 384 -6479 3590 150 21 38 chr2 32265519 32266233 -220990350 + L1PB1 LINE L1 397 1098 -5765 1097 41 14 0 chr2 32266227 32266373 -220990210 - L1PA4 LINE L1 -1613 4533 4386 * 7229 48 2 1 chr2 32266373 32268027 -220988556 + L1PA4 LINE L1 4502 6154 -1 12910 195 24 11 chr2 32268098 32268850 -220987733 + L1PB1 LINE L1 1084 1825 -5042 3000 31 0 0 chr2 32268850 32269202 -220987381 + L1PA3 LINE L1 5804 6155 0 12910 195 24 11 chr2 32269202 32272063 -220984520 + L1PB1 LINE L1 1825 4847 -2020 1784 128 88 0 chr2 32272063 32272336 -220984247 + AluSg SINE Alu 6 302 -8 12910 195 24 11 chr2 32272336 32274379 -220982204 + L1PB1 LINE L1 4847 6862 -5 4008 180 47 9 chr2 32274380 32275756 -220980827 + L1MA2 LINE L1 3168 4600 -2965 4579 134 16 6 chr2 32275758 32276551 -220980032 - L1PA13 LINE L1 0 6163 5363 8399 147 18 17 chr2 32276551 32276924 -220979659 + L1MA2 LINE L1 4968 5339 -2384 12728 150 32 2 chr2 32276924 32279993 -220976590 + L1PA11 LINE L1 3060 6165 -9 8399 147 18 17 chr2 32279993 32282362 -220974221 + L1MA2 LINE L1 5339 7714 -9 690 231 60 112 chr2 32282362 32282709 -220973874 - MER77 LTR ERV1 -113 492 164 895 188 6 0 chr2 32282715 32282875 -220973708 - MLT1C LTR MaLR -2 465 305 439 224 135 26 chr2 32282893 32283049 -220973534 + L1M4 LINE L1 1145 1317 -5099 1110 287 92 39 chr2 32283123 32283704 -220972879 + L1M4 LINE L1 1262 1811 -4796 1533 192 50 33 chr2 32283704 32284063 -220972520 + MLT1A1 LTR MaLR 1 365 0 1110 287 92 39 chr2 32284063 32284389 -220972194 + L1M4 LINE L1 1811 2405 -4202 3603 214 86 18 chr2 32284398 32284772 -220971811 + L1M4 LINE L1 4458 4805 -1621 1358 253 30 24 chr2 32284772 32285143 -220971440 + MLT1A2 LTR MaLR 2 374 0 3603 214 86 18 chr2 32285143 32285847 -220970736 + L1M4 LINE L1 4805 5610 -816 4241 178 51 12 chr2 32285847 32286753 -220969830 + L1MA7 LINE L1 3387 4327 -1819 2230 112 0 10 chr2 32286755 32287067 -220969516 + AluSx SINE Alu 2 310 -2 703 278 151 0 chr2 32287067 32287279 -220969304 + MLT1G1 LTR MaLR 352 595 0 2002 199 72 33 chr2 32287282 32287924 -220968659 + L1ME2 LINE L1 5150 5819 -345 1855 167 3 19 chr2 32287924 32288241 -220968342 + AluSx SINE Alu 1 312 0 2002 199 72 33 chr2 32288241 32288272 -220968311 + L1ME2 LINE L1 5819 5847 -317 * 5279 174 16 7 chr2 32288261 32289601 -220966982 + L1MA7 LINE L1 4299 5650 -662 2136 140 28 8 chr2 32289601 32289958 -220966625 - THE1B LTR MaLR 0 364 1 5466 123 5 1 chr2 32289958 32290729 -220965854 - THE1B-int LTR MaLR 0 1580 807 2165 136 32 46 chr2 32290732 32291101 -220965482 + THE1B LTR MaLR 1 364 0 7510 165 50 65 chr2 32291103 32292778 -220963805 + THE1B-int LTR MaLR 3 1651 0 2171 128 36 28 chr2 32292781 32293140 -220963443 + THE1B LTR MaLR 3 364 0 4978 130 58 1 chr2 32293140 32293900 -220962683 - THE1B-int LTR MaLR -772 808 6 2197 152 22 0 chr2 32293905 32294261 -220962322 - THE1B LTR MaLR 0 364 1 3089 175 20 17 chr2 32294262 32294901 -220961682 + L1MA7 LINE L1 5647 6287 -4 1948 172 15 0 chr2 32294918 32295244 -220961339 + L1M4 LINE L1 5600 5930 -534 * 3897 112 5 1 chr2 32295236 32296031 -220960552 - L1P4 LINE L1 -381 5787 4990 2703 131 5 5 chr2 32296030 32296459 -220960124 + L1P LINE L1 3906 4334 -1812 * 553 93 27 0 chr2 32296467 32296542 -220960041 + Tigger1 DNA MER2_type 2341 2417 -1 28 0 0 0 chr2 32296725 32296753 -220959830 + AT_rich Low_complexity Low_complexity 1 28 0 331 113 0 16 chr2 32296753 32296815 -220959768 + L1MD2 LINE L1 6296 6356 -3 220 113 38 62 chr2 32296844 32296924 -220959659 + (TATAA)n Simple_repeat Simple_repeat 4 81 0 2646 201 39 15 chr2 32296953 32297540 -220959043 - L1MD1 LINE L1 0 6242 5642 276 30 0 0 chr2 32297544 32297577 -220959006 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 1575 174 0 39 chr2 32297579 32297860 -220958723 - AluJo SINE Alu -31 281 12 3154 103 17 4 chr2 32297889 32298353 -220958230 - L1PA11 LINE L1 -2 6172 5703 7023 119 28 7 chr2 32298353 32299380 -220957203 - HSMAR1 DNA Mariner -232 1055 7 753 223 0 11 chr2 32299381 32299556 -220957027 - L1P3 LINE L1 -5003 1458 1286 8299 217 132 5 chr2 32299565 32300022 -220956561 - L1P LINE L1 -2028 4118 3720 1578 96 44 4 chr2 32300022 32300272 -220956311 - L1MA2 LINE L1 0 6304 6045 8299 217 132 5 chr2 32300272 32300297 -220956286 - L1P LINE L1 -2426 3720 3700 15754 69 3 1 chr2 32300297 32303143 -220953440 - L1PA6 LINE L1 -5 6149 3296 8299 217 132 5 chr2 32303143 32303362 -220953221 - L1P LINE L1 -2446 3700 3510 216 0 0 0 chr2 32303362 32303386 -220953197 + (TG)n Simple_repeat Simple_repeat 2 25 0 8299 217 132 5 chr2 32303386 32304910 -220951673 - L1P LINE L1 -2636 3510 1609 1601 93 98 0 chr2 32305082 32305307 -220951276 + LTR17 LTR ERV1 534 780 0 5624 75 0 17 chr2 32305307 32306026 -220950557 + HERV17 LTR ERV1 1 707 -7919 9544 72 9 12 chr2 32306179 32307465 -220949118 + HERV17 LTR ERV1 732 2014 -6612 * 10766 57 2 1 chr2 32307450 32308774 -220947809 + HERV17 LTR ERV1 2430 3754 -4872 5001 49 5 2 chr2 32308753 32309366 -220947217 + HERV17 LTR ERV1 5405 6019 -2607 * 2342 62 3 0 chr2 32309384 32309675 -220946908 + HERV17 LTR ERV1 8335 8626 0 2336 59 0 98 chr2 32309679 32309830 -220946753 + LTR17 LTR ERV1 5 103 -677 428 19 0 0 chr2 32309830 32309882 -220946701 + L1PA6 LINE L1 6098 6149 -5 2336 59 0 98 chr2 32309882 32310087 -220946496 + LTR17 LTR ERV1 103 326 -454 797 281 37 39 chr2 32310088 32310469 -220946114 + L1ME2 LINE L1 1022 1401 -5025 357 183 10 7 chr2 32310494 32310592 -220945991 - L1MB3 LINE L1 0 6180 6086 6317 197 43 87 chr2 32310597 32313279 -220943304 - L1MA4 LINE L1 -280 6202 3403 924 237 82 109 chr2 32313279 32313706 -220942877 + MER66A LTR ERV1 93 468 -10 6317 197 43 87 chr2 32313706 32317132 -220939451 - L1MA4 LINE L1 -3079 3403 5 724 291 93 0 chr2 32317153 32317455 -220939128 + L1ME2 LINE L1 1639 1968 -4639 755 224 18 14 chr2 32317484 32317703 -220938880 + L1ME2 LINE L1 4009 4228 -2198 1883 231 30 8 chr2 32317723 32318256 -220938327 + L1ME2 LINE L1 4809 5353 -1073 1760 226 41 37 chr2 32318266 32319113 -220937470 + L1ME2 LINE L1 5516 6434 -10 1978 225 85 52 chr2 32319134 32320326 -220936257 + L1MC4 LINE L1 6374 7700 -342 1613 145 128 0 chr2 32320326 32320622 -220935961 - MER1B DNA MER1_type -3 334 1 1978 225 85 52 chr2 32320622 32320829 -220935754 + L1MC4 LINE L1 7700 7899 -143 1731 72 72 11 chr2 32321114 32321378 -220935205 + L1MA1 LINE L1 6023 6302 0 261 250 77 29 chr2 32321564 32321668 -220934915 + MIR SINE MIR 154 262 0 231 36 0 0 chr2 32322094 32322122 -220934461 + (CA)n Simple_repeat Simple_repeat 1 28 0 890 291 77 24 chr2 32322281 32322618 -220933965 - MLT1J LTR MaLR -154 357 3 240 35 0 0 chr2 32322752 32322781 -220933802 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1886 157 7 0 chr2 32322793 32323099 -220933484 + AluSx SINE Alu 1 308 0 499 211 0 0 chr2 32323203 32323293 -220933290 - MER5A DNA MER1_type -84 105 16 677 298 145 31 chr2 32323583 32324039 -220932544 - L1MC4a LINE L1 -94 6027 5520 22 0 0 0 chr2 32325372 32325394 -220931189 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr2 32325478 32325504 -220931079 + AT_rich Low_complexity Low_complexity 1 26 0 27 29 0 0 chr2 32326606 32326640 -220929943 + AT_rich Low_complexity Low_complexity 1 34 0 1656 166 53 0 chr2 32327900 32328184 -220928399 - AluJb SINE Alu -13 299 1 228 214 48 87 chr2 32328439 32328542 -220928041 + HAL1 LINE L1 980 1078 -1429 857 229 147 50 chr2 32328800 32329201 -220927382 + LTR50 LTR ERVL 100 539 -256 485 292 52 21 chr2 32329217 32329409 -220927174 + LTR50 LTR ERVL 475 672 -123 2308 91 3 0 chr2 32329590 32329887 -220926696 - AluSq SINE Alu -15 298 1 29 28 0 0 chr2 32330539 32330575 -220926008 + AT_rich Low_complexity Low_complexity 1 36 0 2211 118 3 6 chr2 32331015 32331329 -220925254 - AluSq SINE Alu 0 313 1 463 299 15 8 chr2 32332199 32332333 -220924250 + L2 LINE L2 2004 2138 -1176 838 236 66 43 chr2 32332337 32332742 -220923841 + MLT1A1 LTR MaLR 10 362 -3 1917 218 31 56 chr2 32332745 32333264 -220923319 + L1MC3 LINE L1 7279 7784 -1 703 201 67 12 chr2 32333323 32333487 -220923096 - FRAM SINE Alu -7 169 1 7842 193 35 4 chr2 32334014 32335757 -220920826 + L1P LINE L1 2840 4636 -1510 514 261 85 46 chr2 32335781 32336041 -220920542 - L1MEc LINE L1 -5141 1255 986 1342 237 5 58 chr2 32336101 32336380 -220920203 + L1MC1 LINE L1 5409 5658 -2150 1580 121 12 8 chr2 32336380 32336628 -220919955 + L1MC1 LINE L1 6071 6319 -14 1342 237 5 58 chr2 32336628 32336783 -220919800 + L1MC1 LINE L1 5658 5820 -1988 678 218 29 12 chr2 32336783 32336953 -220919630 - HERVL40 LTR ERVL -2142 3388 3216 1353 240 49 17 chr2 32336959 32337309 -220919274 - HERVL40 LTR ERVL -2477 3053 2693 922 192 47 19 chr2 32337309 32337523 -220919060 - LTR40a LTR ERVL -293 226 7 624 268 95 30 chr2 32337528 32338184 -220918399 - L1ME LINE L1 -4940 1321 581 1636 190 52 3 chr2 32338245 32338534 -220918049 - AluJb SINE Alu -9 303 1 1119 213 126 41 chr2 32338926 32339559 -220917024 + Zaphod DNA AcHobo 284 970 -3061 7064 31 0 0 chr2 32339559 32340397 -220916186 + L1PA4 LINE L1 5318 6155 0 1007 196 60 4 chr2 32340435 32340701 -220915882 + Zaphod DNA AcHobo 3595 3875 -156 1428 215 47 68 chr2 32340719 32341310 -220915273 + MER82 DNA MER2_type 7 653 0 523 203 20 59 chr2 32341310 32341341 -220915242 + MER115 DNA AcHobo 548 579 -114 1709 201 13 0 chr2 32341341 32341649 -220914934 + AluJb SINE Alu 1 312 0 523 203 20 59 chr2 32341649 32341769 -220914814 + MER115 DNA AcHobo 579 693 0 22 35 0 0 chr2 32342710 32342739 -220913844 + AT_rich Low_complexity Low_complexity 1 29 0 2383 89 65 8 chr2 32343306 32343678 -220912905 + MLT2A1 LTR ERVL 1 393 -51 13549 203 33 20 chr2 32345038 32352741 -220903842 - L1PB3 LINE L1 -2 6868 1 352 211 222 0 chr2 32352913 32353003 -220903580 + MIR3 SINE MIR 50 159 -49 3627 132 10 28 chr2 32353073 32354028 -220902555 + L1MA8 LINE L1 4738 5686 -605 * 33311 99 25 8 chr2 32354027 32357763 -220898820 - L1PA6 LINE L1 -5 6149 2274 210 37 0 0 chr2 32357763 32357790 -220898793 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 33311 99 25 8 chr2 32357790 32360093 -220896490 - L1PA6 LINE L1 -3880 2274 11 3293 147 28 7 chr2 32360101 32360706 -220895877 + L1MA8 LINE L1 5671 6288 -3 21 0 0 0 chr2 32360717 32360738 -220895845 + AT_rich Low_complexity Low_complexity 1 21 0 375 307 98 56 chr2 32361337 32361552 -220895031 - L1MC4 LINE L1 0 8042 7819 312 276 18 25 chr2 32361603 32361766 -220894817 - L1MC5 LINE L1 -296 7665 7504 401 275 50 28 chr2 32361927 32362109 -220894474 - L1MC4 LINE L1 -547 7495 7310 282 317 29 0 chr2 32362222 32362326 -220894257 - L1MC5 LINE L1 -864 7097 6991 809 231 11 0 chr2 32362408 32362629 -220893954 - L1MC4 LINE L1 -856 7002 6730 1444 163 8 0 chr2 32362718 32362975 -220893608 + Tigger2 DNA MER2_type 2460 2718 0 209 108 27 0 chr2 32362999 32363036 -220893547 + (TG)n Simple_repeat Simple_repeat 2 39 0 1789 148 25 22 chr2 32363040 32363399 -220893184 - Tigger6a DNA MER2_type -3 1080 721 1786 184 45 134 chr2 32363404 32364076 -220892507 - LTR9 LTR ERV1 0 612 1 1484 143 2 8 chr2 32364078 32364339 -220892244 - HUERS-P3 LTR ERV1 0 8919 7163 13433 127 3 14 chr2 32364555 32366326 -220890257 - HUERS-P3 LTR ERV1 -2007 6912 5165 2486 33 40 0 chr2 32366326 32366625 -220889958 - AluY SINE Alu 0 311 1 13433 127 3 14 chr2 32366625 32366940 -220889643 - HUERS-P3 LTR ERV1 -3754 5165 4848 * 18636 126 4 7 chr2 32366923 32369749 -220886834 - HUERS-P3 LTR ERV1 -4313 4606 1791 4036 194 53 9 chr2 32369746 32370798 -220885785 - HUERS-P3 LTR ERV1 -7267 1652 473 * 525 244 88 29 chr2 32370826 32371031 -220885552 - LTR19C LTR ERV1 -72 707 491 * 1452 208 7 85 chr2 32371014 32371438 -220885145 - LTR9 LTR ERV1 -221 391 1 2285 174 98 6 chr2 32371449 32371921 -220884662 - Tigger6a DNA MER2_type -568 515 1 2591 269 14 38 chr2 32373431 32373914 -220882669 + L1M3b LINE L1 10 470 -5811 2677 40 0 0 chr2 32373914 32374215 -220882368 - AluY SINE Alu -10 301 1 2591 269 14 38 chr2 32374215 32374501 -220882082 + L1M3b LINE L1 470 761 -5520 * 8819 223 44 26 chr2 32374487 32376951 -220879632 + L1M3b LINE L1 630 3049 -3301 2047 122 3 33 chr2 32376951 32377255 -220879328 + AluSq SINE Alu 1 295 -18 8819 223 44 26 chr2 32377255 32378695 -220877888 + L1M3b LINE L1 3049 4294 -2056 2846 134 9 0 chr2 32378695 32379119 -220877464 + MSTA LTR MaLR 1 428 0 8819 223 44 26 chr2 32379119 32379244 -220877339 + L1M3b LINE L1 4294 4415 -1935 196 258 61 30 chr2 32380228 32380294 -220876289 - L2 LINE L2 -44 3269 3202 405 336 7 7 chr2 32381061 32381198 -220875385 + MIR3 SINE MIR 10 146 -62 410 315 51 17 chr2 32381276 32381454 -220875129 + MIR SINE MIR 57 240 -22 234 311 66 28 chr2 32381666 32381772 -220874811 - MER5A DNA MER1_type -22 167 58 597 266 133 4 chr2 32383215 32383254 -220873329 - LTR16B LTR ERVL -9 455 422 2219 122 0 0 chr2 32383254 32383549 -220873034 + AluSx SINE Alu 1 295 -17 597 266 133 4 chr2 32383549 32383772 -220872811 - LTR16B LTR ERVL -42 422 159 431 240 0 0 chr2 32385574 32385678 -220870905 - L1M4 LINE L1 -1559 4587 4484 414 242 35 46 chr2 32385668 32385869 -220870714 + L1ME3A LINE L1 5669 5866 -304 * 20260 153 31 14 chr2 32386663 32387067 -220869516 + L1M1 LINE L1 16 411 -7154 2128 23 27 8 chr2 32387067 32387328 -220869255 - L1PA5 LINE L1 0 6154 5889 20260 153 31 14 chr2 32387328 32390348 -220866235 + L1M1 LINE L1 411 3523 -4042 405 0 0 0 chr2 32390348 32390393 -220866190 + (GGAA)n Simple_repeat Simple_repeat 4 48 0 20260 153 31 14 chr2 32390393 32390917 -220865666 + L1M1 LINE L1 3523 4036 -3529 8541 189 19 20 chr2 32390919 32392314 -220864269 + L1 LINE L1 3790 5186 -2379 2187 83 0 10 chr2 32392314 32392602 -220863981 + AluY SINE Alu 26 310 -1 8541 189 19 20 chr2 32392602 32393162 -220863421 + L1 LINE L1 5186 5745 -1820 1693 166 0 28 chr2 32393162 32393479 -220863104 + AluJb SINE Alu 1 309 0 8541 189 19 20 chr2 32393479 32393519 -220863064 + L1 LINE L1 5745 5784 -1781 21310 164 21 18 chr2 32393523 32399772 -220856811 + L1PA8 LINE L1 1 7606 -4 270 160 40 0 chr2 32399773 32399823 -220856760 + LTR8 LTR ERV1 533 584 -107 27 73 0 0 chr2 32399823 32399878 -220856705 + AT_rich Low_complexity Low_complexity 1 55 0 189 171 0 0 chr2 32400787 32400822 -220855761 + A-rich Low_complexity Low_complexity 1 35 0 2179 84 7 29 chr2 32400900 32401208 -220855375 + AluY SINE Alu 1 301 -10 363 229 57 0 chr2 32401209 32401331 -220855252 + L1ME4a LINE L1 5756 5884 -237 417 247 13 26 chr2 32401375 32401529 -220855054 + L1MC5 LINE L1 7762 7913 -48 1958 138 24 6 chr2 32401531 32401865 -220854718 + L1PA16 LINE L1 5818 6157 -9 545 261 11 43 chr2 32402298 32402482 -220854101 - MER5B DNA MER1_type 0 178 1 580 206 7 85 chr2 32402501 32402642 -220853941 - MER5B DNA MER1_type 0 178 49 1284 159 58 11 chr2 32402991 32403267 -220853316 + L1MB3 LINE L1 5892 6180 -3 385 311 33 32 chr2 32403800 32403966 -220852617 - MER5A DNA MER1_type 0 189 12 8861 195 55 40 chr2 32404146 32404815 -220851768 + L1M1 LINE L1 16 673 -6892 396 0 0 0 chr2 32404815 32404859 -220851724 + (CAGTG)n Simple_repeat Simple_repeat 3 46 0 8861 195 55 40 chr2 32404859 32405279 -220851304 + L1M1 LINE L1 673 1085 -6480 2067 139 30 38 chr2 32405279 32405646 -220850937 - THE1B LTR MaLR 0 364 1 8861 195 55 40 chr2 32405646 32407451 -220849132 + L1M1 LINE L1 1085 3634 -3931 710 163 30 22 chr2 32407454 32407589 -220848994 + FLAM_C SINE Alu 8 143 0 411 87 22 33 chr2 32407594 32407686 -220848897 + (TA)n Simple_repeat Simple_repeat 2 92 0 5065 197 45 14 chr2 32407686 32409016 -220847567 + L1M1 LINE L1 3628 4999 -2566 1325 121 13 16 chr2 32409028 32409321 -220847262 + L1MA4 LINE L1 5202 5493 -743 3482 30 0 0 chr2 32409321 32409749 -220846834 + L1PA5 LINE L1 5734 6164 0 4874 133 12 2 chr2 32409765 32410567 -220846016 + L1MA4 LINE L1 5485 6294 -6 590 193 207 7 chr2 32410606 32410751 -220845832 + MER5A DNA MER1_type 16 189 0 190 240 20 100 chr2 32410758 32410858 -220845725 - MER5A DNA MER1_type -1 188 97 595 311 70 20 chr2 32411496 32411740 -220844843 - MIR SINE MIR -5 257 2 757 256 51 19 chr2 32413130 32413345 -220843238 + MIR SINE MIR 7 228 -34 183 346 0 0 chr2 32413458 32413510 -220843073 - MER5A DNA MER1_type -115 74 23 405 0 0 0 chr2 32413805 32413850 -220842733 + (CA)n Simple_repeat Simple_repeat 2 46 0 566 250 22 17 chr2 32414610 32414778 -220841805 + MIR SINE MIR 5 176 -32 587 290 157 69 chr2 32415363 32415842 -220840741 - LTR33 LTR ERVL 0 521 1 648 322 83 33 chr2 32415957 32416091 -220840492 - ERVL LTR ERVL -2323 3331 3205 24869 45 4 0 chr2 32416091 32419982 -220836601 - L1PA5 LINE L1 -1 6153 2250 648 322 83 33 chr2 32419982 32420572 -220836011 - ERVL LTR ERVL -2449 3205 2506 827 322 45 20 chr2 32420609 32420767 -220835816 - ERVL LTR ERVL -3424 2269 2116 2046 201 65 92 chr2 32420767 32421410 -220835173 + MLT1E2 LTR MaLR 1 626 0 827 322 45 20 chr2 32421410 32421708 -220834875 - ERVL LTR ERVL -3577 2116 1744 881 124 20 13 chr2 32421807 32421960 -220834623 - MLT1D LTR MaLR 0 505 352 268 286 48 0 chr2 32422208 32422334 -220834249 - ERVL LTR ERVL -5061 593 462 1285 70 0 0 chr2 32422426 32422609 -220833974 - AluY SINE Alu 0 313 131 216 0 0 0 chr2 32422611 32422635 -220833948 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2004 61 0 4 chr2 32422635 32422881 -220833702 - AluY SINE Alu -28 283 39 396 0 0 0 chr2 32423852 32423896 -220832687 + (TG)n Simple_repeat Simple_repeat 2 45 0 335 315 63 8 chr2 32423955 32424082 -220832501 + MLT1I LTR MaLR 36 169 -240 232 200 43 0 chr2 32424212 32424282 -220832301 + MLT1J1 LTR MaLR 347 419 -27 1201 87 6 0 chr2 32424282 32424455 -220832128 + L1MA2 LINE L1 5437 5610 -695 * 11934 88 3 1 chr2 32424453 32426149 -220830434 + L1PA5 LINE L1 1 1701 -4440 19710 40 5 0 chr2 32426149 32429403 -220827180 + L1PA5 LINE L1 2902 6153 -1 584 122 139 0 chr2 32429403 32429518 -220827065 + L1PB4 LINE L1 6025 6155 -1 * 2780 125 11 2 chr2 32429512 32429967 -220826616 + L1MA2 LINE L1 5593 6051 -253 10193 141 16 27 chr2 32429981 32432786 -220823797 + L1P3 LINE L1 6 2801 -3660 5642 110 15 16 chr2 32432785 32433716 -220822867 - L1P LINE L1 -3043 3103 2174 * 1943 116 29 3 chr2 32433715 32434025 -220822558 + MSTA-int LTR MaLR 1334 1651 0 * 1990 144 160 5 chr2 32434025 32434393 -220822190 + MSTA LTR MaLR 1 425 -3 186 348 28 43 chr2 32434421 32434562 -220822021 - L2 LINE L2 -303 2969 2831 2416 97 35 0 chr2 32434609 32434979 -220821604 + L1MA2 LINE L1 5919 6301 -3 216 260 39 26 chr2 32435338 32435415 -220821168 - MIR3 SINE MIR -13 195 118 237 188 29 0 chr2 32435997 32436066 -220820517 - MER69 DNA AcHobo -58 2468 2398 684 206 23 0 chr2 32436068 32436199 -220820384 + FLAM_C SINE Alu 1 134 -9 734 250 56 51 chr2 32436276 32436697 -220819886 - L1MEc LINE L1 -3714 2523 2120 430 261 9 0 chr2 32436793 32436908 -220819675 - L1M4 LINE L1 -1981 4165 4050 2138 108 7 24 chr2 32437016 32437313 -220819270 - AluSx SINE Alu -20 292 1 911 200 19 29 chr2 32437581 32437786 -220818797 - MLT1A2 LTR MaLR 0 374 172 * 1764 133 7 7 chr2 32437776 32438055 -220818528 + MSTA LTR MaLR 150 428 0 359 132 0 110 chr2 32438056 32438147 -220818436 - MLT1A2 LTR MaLR -293 81 1 982 232 61 67 chr2 32438723 32439248 -220817335 + L1MC5 LINE L1 7173 7694 -267 298 226 21 21 chr2 32439260 32439353 -220817230 + (TA)n Simple_repeat Simple_repeat 2 94 0 331 303 121 0 chr2 32439465 32439597 -220816986 - L2 LINE L2 -639 2675 2528 406 277 15 46 chr2 32440876 32441006 -220815577 - MIR SINE MIR -70 192 67 750 260 41 58 chr2 32441553 32441795 -220814788 + MIR SINE MIR 20 257 -5 2369 106 0 0 chr2 32442683 32442984 -220813599 + AluSx SINE Alu 4 304 -8 192 152 0 0 chr2 32443137 32443170 -220813413 + C-rich Low_complexity Low_complexity 6 38 0 542 195 176 34 chr2 32443193 32443460 -220813123 - MER69 DNA AcHobo -13 2513 2209 606 180 0 0 chr2 32443545 32443667 -220812916 + LTR37A LTR ERV1 301 422 -4 534 171 189 0 chr2 32444006 32444117 -220812466 - FLAM_A SINE Alu -1 132 1 1956 138 3 0 chr2 32444541 32444823 -220811760 + AluSx SINE Alu 28 310 -2 709 231 25 66 chr2 32444949 32445191 -220811392 + MER31-int LTR ERV1 3852 4083 -853 2138 109 34 0 chr2 32445191 32445484 -220811099 + AluSq SINE Alu 1 303 -10 421 231 116 0 chr2 32445781 32445928 -220810655 + LTR37A LTR ERV1 38 201 -225 335 325 34 12 chr2 32445971 32446291 -220810292 - L1M4 LINE L1 -1451 4695 4369 21 71 0 0 chr2 32446533 32446575 -220810008 + AT_rich Low_complexity Low_complexity 1 42 0 689 173 0 9 chr2 32446695 32446870 -220809713 - MER89 LTR ERV1 0 559 334 389 200 129 86 chr2 32446858 32446998 -220809585 - MLT1C LTR MaLR -321 146 1 * 364 200 32 0 chr2 32446999 32447094 -220809489 + L1MB8 LINE L1 6079 6176 -2 198 71 0 0 chr2 32447505 32447533 -220809050 + (CTA)n Simple_repeat Simple_repeat 1 28 0 1049 218 32 9 chr2 32448251 32448591 -220807992 + L1MEc LINE L1 2047 2394 -4002 24 53 0 0 chr2 32448598 32448636 -220807947 + AT_rich Low_complexity Low_complexity 1 38 0 2153 157 3 3 chr2 32448651 32449008 -220807575 - MLT2C1 LTR ERVL -40 357 1 4244 237 49 22 chr2 32449019 32449534 -220807049 + L1MEc LINE L1 2374 2873 -3342 1960 162 0 7 chr2 32449534 32449837 -220806746 + AluJb SINE Alu 1 301 -11 4244 237 49 22 chr2 32449837 32450843 -220805740 + L1MEc LINE L1 2873 3937 -2278 1996 175 37 30 chr2 32450844 32451392 -220805191 + MLT2A2 LTR ERVL 1 554 0 2799 208 77 32 chr2 32451402 32452320 -220804263 + L1MEc LINE L1 3944 4903 -1312 961 252 189 45 chr2 32452375 32452799 -220803784 + L2 LINE L2 2824 3308 -5 230 270 87 35 chr2 32452857 32452972 -220803611 - L2 LINE L2 -9 3304 3184 1682 129 13 41 chr2 32453139 32453456 -220803127 + L1MCa LINE L1 37 344 -6082 7808 187 26 22 chr2 32453460 32455069 -220801514 + L1PA13 LINE L1 1 1615 -5172 1553 143 0 0 chr2 32455069 32455342 -220801241 + L1P LINE L1 4623 4895 -1251 * 17701 175 15 17 chr2 32455340 32455699 -220800884 + L1PA13 LINE L1 2122 2480 -4334 2290 122 0 0 chr2 32455699 32456010 -220800573 + AluSx SINE Alu 1 311 -1 17701 175 15 17 chr2 32456010 32459009 -220797574 + L1PA13 LINE L1 2480 5482 -1332 4643 171 51 46 chr2 32459009 32460075 -220796508 + MER11C LTR ERVK 1 1071 0 17701 175 15 17 chr2 32460075 32460551 -220796032 + L1PA13 LINE L1 5482 5957 -857 1886 174 0 3 chr2 32460551 32460856 -220795727 + AluJb SINE Alu 1 304 -8 17701 175 15 17 chr2 32460856 32461698 -220794885 + L1PA13 LINE L1 5957 6803 -11 886 190 150 46 chr2 32461744 32461980 -220794603 + MER21B LTR ERV1 23 271 -475 823 276 40 12 chr2 32461970 32462220 -220794363 + MER21B LTR ERV1 493 749 -114 * 237 241 0 0 chr2 32462297 32462355 -220794228 + L1MCa LINE L1 360 417 -6009 695 190 0 0 chr2 32462634 32462755 -220793828 + Tigger5 DNA MER2_type 2200 2320 -3 3254 211 27 8 chr2 32462764 32464087 -220792496 + L1MCa LINE L1 2057 3406 -3020 651 117 0 0 chr2 32464087 32464190 -220792393 + (GGAA)n Simple_repeat Simple_repeat 1 103 0 648 293 105 38 chr2 32464474 32464894 -220791689 - MLT1J2 LTR MaLR 0 450 3 900 172 17 0 chr2 32465171 32465345 -220791238 + L1MD3 LINE L1 7501 7677 -318 5673 153 5 20 chr2 32465346 32466156 -220790427 + L1MA8 LINE L1 4217 5037 -1275 1947 163 7 0 chr2 32466156 32466456 -220790127 + AluSx SINE Alu 1 302 -10 5673 153 5 20 chr2 32466456 32466911 -220789672 + L1MA8 LINE L1 5037 5945 -367 612 158 18 35 chr2 32466914 32467028 -220789555 + FLAM_C SINE Alu 7 118 -25 4524 98 30 6 chr2 32467037 32467750 -220788833 + L1MA2 LINE L1 5428 6157 -147 309 114 0 0 chr2 32467751 32467795 -220788788 + Alu SINE Alu 1 44 -256 1345 146 5 27 chr2 32467795 32467999 -220788584 + AluSg/x SINE Alu 91 291 -19 835 124 78 0 chr2 32467999 32468152 -220788431 + L1MA3 LINE L1 6139 6303 -2 1345 146 5 27 chr2 32468152 32468166 -220788417 + AluSg/x SINE Alu 291 304 -6 1045 163 143 4 chr2 32468258 32468510 -220788073 + L1MA8 LINE L1 5937 6223 -68 972 126 7 13 chr2 32468738 32468921 -220787662 - AluJb SINE Alu 0 315 134 435 253 98 37 chr2 32469709 32470055 -220786528 - MLT1J2 LTR MaLR -13 396 30 339 230 50 10 chr2 32470497 32470597 -220785986 - MLT1G1 LTR MaLR 0 595 492 * 1831 225 22 5 chr2 32470595 32470995 -220785588 + MER45B DNA AcHobo 240 646 -394 1954 100 74 0 chr2 32470995 32471265 -220785318 + AluSg SINE Alu 1 290 -20 39224 60 8 1 chr2 32471266 32477355 -220779228 + L1PA5 LINE L1 12 6141 -13 186 43 0 0 chr2 32477358 32477381 -220779202 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 2080 122 3 29 chr2 32477394 32477706 -220778877 + AluSx SINE Alu 1 304 -8 1673 198 23 8 chr2 32477706 32478101 -220778482 + MER45B DNA AcHobo 639 1039 -1 416 277 185 15 chr2 32478293 32478488 -220778095 + L2 LINE L2 3086 3313 0 815 233 136 64 chr2 32478494 32478854 -220777729 + MLT1L LTR MaLR 172 557 -58 2033 100 26 26 chr2 32478934 32479243 -220777340 + AluSx SINE Alu 1 309 -3 1685 113 52 0 chr2 32479243 32479472 -220777111 + AluSx SINE Alu 1 241 -71 3338 112 159 133 chr2 32479472 32480777 -220775806 + pTR5 LTR ERV1 750 2407 -31 246 125 62 62 chr2 32480777 32480857 -220775726 + Alu SINE Alu 221 300 0 686 203 61 7 chr2 32481260 32481408 -220775175 + MLT1C LTR MaLR 305 460 -7 840 206 0 0 chr2 32481647 32481982 -220774601 + (TG)n Simple_repeat Simple_repeat 1 335 0 22 0 0 0 chr2 32482289 32482311 -220774272 + AT_rich Low_complexity Low_complexity 1 22 0 362 251 73 26 chr2 32482391 32482582 -220774001 - L1MC4a LINE L1 -1818 5990 5791 371 260 84 24 chr2 32482672 32483053 -220773530 - L1MC4a LINE L1 -864 5282 4827 4315 49 0 2 chr2 32483055 32483587 -220772996 + L1PA5 LINE L1 5621 6151 -3 4424 197 56 35 chr2 32483769 32484981 -220771602 - L1MC4a LINE L1 -1326 4820 3584 915 162 0 0 chr2 32485110 32485246 -220771337 + AluSq/x SINE Alu 1 136 -176 1777 118 10 78 chr2 32485246 32485586 -220770997 + AluSx SINE Alu 1 319 0 311 301 43 0 chr2 32485984 32486077 -220770506 - MIR SINE MIR -54 208 112 644 224 149 6 chr2 32486085 32486246 -220770337 + MER5A DNA MER1_type 4 187 -2 2054 108 13 33 chr2 32486824 32487131 -220769452 + AluSq SINE Alu 1 301 -12 383 273 120 53 chr2 32487860 32488010 -220768573 + MIR SINE MIR 75 234 -28 294 282 147 12 chr2 32488609 32488772 -220767811 - MIR SINE MIR -31 231 47 2589 197 81 82 chr2 32488962 32489789 -220766794 - LTR1B LTR ERV1 0 826 1 2322 104 0 7 chr2 32490372 32490681 -220765902 - AluSc SINE Alu -2 307 1 2080 128 3 0 chr2 32491709 32491999 -220764584 + AluSp SINE Alu 1 291 -22 219 111 44 0 chr2 32491999 32492044 -220764539 + (TA)n Simple_repeat Simple_repeat 2 48 0 184 326 153 7 chr2 32492277 32492421 -220764162 + L2 LINE L2 1955 2119 -1195 214 304 0 14 chr2 32492549 32492618 -220763965 + GA-rich Low_complexity Low_complexity 2 69 0 198 301 60 0 chr2 32492621 32492704 -220763879 + L2 LINE L2 2230 2317 -997 1255 224 30 92 chr2 32492749 32493306 -220763277 - L1ME1 LINE L1 -4 6162 5640 4774 151 16 4 chr2 32493320 32494503 -220762080 - L1MA2 LINE L1 -216 6088 4920 2254 159 28 39 chr2 32494503 32494544 -220762039 - MSTA LTR MaLR 0 428 388 2441 94 0 0 chr2 32494544 32494851 -220761732 + AluSc SINE Alu 1 307 -2 2476 88 0 0 chr2 32494851 32495158 -220761425 + AluY SINE Alu 1 307 -4 2254 159 28 39 chr2 32495158 32495548 -220761035 - MSTA LTR MaLR -38 390 1 5689 173 38 6 chr2 32495548 32496616 -220759967 - MSTA-int LTR MaLR 0 1651 550 4774 151 16 4 chr2 32495548 32495559 -220761024 - L1MA2 LINE L1 -1384 4920 4882 * 549 98 11 11 chr2 32496604 32496696 -220759887 - MSTA-int LTR MaLR -1559 92 1 1811 154 31 9 chr2 32496696 32497021 -220759562 - MSTA LTR MaLR 0 428 97 2752 166 34 0 chr2 32497021 32497557 -220759026 - L1MA2 LINE L1 -2094 4052 3499 2340 112 48 11 chr2 32497557 32497931 -220758652 - L1PA11 LINE L1 0 6174 5787 2408 186 9 4 chr2 32497932 32498460 -220758123 - L1 LINE L1 -2499 5066 4536 1900 219 32 9 chr2 32499768 32500230 -220756353 - L1 LINE L1 -3302 4263 3791 7586 26 14 0 chr2 32500230 32501274 -220755309 - L1PA4 LINE L1 -5 6150 5103 7184 33 1 0 chr2 32501274 32502177 -220754406 + L1PA4 LINE L1 4194 5097 -1049 * 10053 177 108 9 chr2 32502167 32502832 -220753751 - L1 LINE L1 -3757 3808 3210 2410 85 0 7 chr2 32502832 32503138 -220753445 + AluY SINE Alu 1 304 -7 10053 177 108 9 chr2 32503138 32505925 -220750658 - L1 LINE L1 -4355 3210 25 3597 192 41 44 chr2 32505930 32506424 -220750159 - L1ME LINE L1 -562 5604 5110 2033 142 7 0 chr2 32506424 32506713 -220749870 - AluSx SINE Alu -21 291 1 3597 192 41 44 chr2 32506713 32507489 -220749094 - L1ME LINE L1 -1056 5110 4323 22 0 0 0 chr2 32507526 32507548 -220749035 + AT_rich Low_complexity Low_complexity 1 22 0 781 203 112 16 chr2 32507697 32507993 -220748590 - MSTD LTR MaLR 0 396 3 907 166 13 7 chr2 32508697 32508848 -220747735 - FRAM SINE Alu -25 151 1 659 167 0 9 chr2 32509191 32509299 -220747284 + AluJo SINE Alu 87 193 -119 393 75 0 0 chr2 32509299 32509352 -220747231 + (GA)n Simple_repeat Simple_repeat 2 54 0 302 263 76 0 chr2 32509355 32509473 -220747110 - MIR3 SINE MIR -75 133 7 308 233 0 14 chr2 32509480 32509553 -220747030 + MER112 DNA MER1_type 1 72 -188 252 0 0 0 chr2 32509556 32509584 -220746999 + (CA)n Simple_repeat Simple_repeat 1 28 0 739 196 143 0 chr2 32509651 32509840 -220746743 - MIR SINE MIR -46 216 1 6861 64 35 0 chr2 32510311 32511232 -220745351 - L1PA7 LINE L1 -2 6152 5227 25 90 0 0 chr2 32511397 32511464 -220745119 + AT_rich Low_complexity Low_complexity 1 67 0 2115 136 23 6 chr2 32511636 32511989 -220744594 - MER46B DNA MER2_type -1 235 2 2134 134 13 19 chr2 32512401 32512714 -220743869 + AluSx SINE Alu 1 311 -1 199 211 0 0 chr2 32513033 32513071 -220743512 - MIR SINE MIR -176 86 49 2429 106 3 0 chr2 32513469 32513781 -220742802 - AluSp SINE Alu 0 313 1 486 308 93 30 chr2 32513814 32514051 -220742532 - MIR SINE MIR 0 262 11 2154 126 7 7 chr2 32514180 32514490 -220742093 + AluSx SINE Alu 3 312 0 2443 67 6 22 chr2 32514804 32515119 -220741464 - AluY SINE Alu -1 310 1 2003 148 13 0 chr2 32515403 32515701 -220740882 - AluSx SINE Alu -10 302 1 1998 127 58 0 chr2 32515961 32516252 -220740331 + AluSx SINE Alu 1 308 -4 2330 104 0 0 chr2 32516276 32516575 -220740008 - AluY SINE Alu -12 299 1 251 270 32 0 chr2 32516760 32516823 -220739760 - MIR SINE MIR -108 154 90 282 264 114 29 chr2 32517381 32517521 -220739062 - MER5B DNA MER1_type 0 178 27 245 333 65 9 chr2 32517428 32517536 -220739047 + MER5A DNA MER1_type 70 183 -6 * 3149 37 0 3 chr2 32517923 32518301 -220738282 - L1PA3 LINE L1 0 6155 5779 2630 10 0 0 chr2 32518301 32518608 -220737975 + L1PA3 LINE L1 5470 5776 -379 191 197 30 91 chr2 32519246 32519312 -220737271 - MIR3 SINE MIR -23 185 124 2707 67 11 0 chr2 32519317 32519674 -220736909 + L1PA7 LINE L1 5793 6153 -1 426 276 149 38 chr2 32519863 32520124 -220736459 - L1ME4a LINE L1 0 6121 5832 778 207 61 0 chr2 32520448 32520612 -220735971 + FRAM SINE Alu 1 174 -2 238 295 78 72 chr2 32520649 32520842 -220735741 - L3 LINE CR1 -576 1001 808 2086 220 129 10 chr2 32521245 32522024 -220734559 - L1ME1 LINE L1 -5 6230 5198 2142 123 10 0 chr2 32522024 32522325 -220734258 - AluSx SINE Alu -8 304 1 2086 220 129 10 chr2 32522325 32522512 -220734071 - L1ME1 LINE L1 -1037 5198 5035 1858 133 10 31 chr2 32522860 32523153 -220733430 + AluSx SINE Alu 1 287 -25 518 259 19 12 chr2 32523204 32523366 -220733217 - L1ME1 LINE L1 -1198 5017 4855 823 218 0 0 chr2 32523367 32523514 -220733069 - FRAM SINE Alu -13 163 17 429 201 126 88 chr2 32523533 32523630 -220732953 - L1ME1 LINE L1 -1352 4863 4771 1559 181 0 83 chr2 32523630 32523968 -220732615 + AluJo SINE Alu 1 310 -2 429 201 126 88 chr2 32523968 32524164 -220732419 - L1ME1 LINE L1 -1444 4771 4559 340 277 0 0 chr2 32524162 32524245 -220732338 - L1ME1 LINE L1 -2099 4116 4034 * 1141 246 161 24 chr2 32524238 32524909 -220731674 - L1ME1 LINE L1 -2421 3794 3032 1995 117 57 0 chr2 32524964 32525247 -220731336 + AluSx SINE Alu 1 299 -13 1438 191 50 0 chr2 32525259 32525521 -220731062 + AluJo SINE Alu 1 275 -37 1186 255 91 15 chr2 32525577 32526248 -220730335 - L1ME1 LINE L1 -3316 2899 2140 2201 60 57 7 chr2 32526271 32526552 -220730031 + AluSp SINE Alu 1 295 -18 1276 106 0 0 chr2 32526637 32526798 -220729785 + AluSc SINE Alu 1 161 -148 21 36 0 0 chr2 32527500 32527528 -220729055 + AT_rich Low_complexity Low_complexity 1 28 0 1690 132 60 0 chr2 32527659 32527925 -220728658 - AluSx SINE Alu -30 282 1 248 323 32 21 chr2 32528572 32528665 -220727918 + MIR SINE MIR 22 115 -147 226 184 112 31 chr2 32528670 32528768 -220727815 - L1M4 LINE L1 -923 5223 5118 294 240 6 43 chr2 32528796 32528888 -220727695 - MLT1E1 LTR MaLR -266 388 193 289 208 0 42 chr2 32528923 32528995 -220727588 - MLT1E1 LTR MaLR -511 82 14 277 268 0 0 chr2 32529186 32529257 -220727326 - MER116 DNA Mariner -2 78 8 229 336 144 16 chr2 32529399 32529524 -220727059 + MIR SINE MIR 48 188 -74 22 0 0 0 chr2 32529739 32529761 -220726822 + AT_rich Low_complexity Low_complexity 1 22 0 567 40 0 0 chr2 32530256 32530330 -220726253 + (TCTA)n Simple_repeat Simple_repeat 4 77 0 695 175 33 0 chr2 32530331 32530451 -220726132 - FLAM_C SINE Alu -19 124 1 417 20 0 0 chr2 32533163 32533213 -220723370 + (CA)n Simple_repeat Simple_repeat 1 50 0 25 31 0 0 chr2 32533317 32533349 -220723234 + AT_rich Low_complexity Low_complexity 1 32 0 1750 123 63 18 chr2 32533716 32534000 -220722583 + AluSx SINE Alu 1 297 -15 197 119 24 0 chr2 32534476 32534518 -220722065 + (TA)n Simple_repeat Simple_repeat 1 43 0 2114 115 18 0 chr2 32534575 32534853 -220721730 - AluSx SINE Alu -23 289 7 1790 139 21 7 chr2 32535741 32536021 -220720562 + AluSx SINE Alu 11 294 -18 195 417 0 0 chr2 32536021 32536129 -220720454 + MIR SINE MIR 40 147 -61 273 366 16 63 chr2 32536243 32536434 -220720149 - MIR3 SINE MIR -11 197 16 1706 150 10 70 chr2 32536875 32537188 -220719395 - AluJb SINE Alu -18 294 1 23 33 0 0 chr2 32537188 32537218 -220719365 + AT_rich Low_complexity Low_complexity 1 30 0 29 84 0 0 chr2 32537434 32537505 -220719078 + AT_rich Low_complexity Low_complexity 1 71 0 332 149 0 15 chr2 32537824 32537891 -220718692 + (CA)n Simple_repeat Simple_repeat 1 66 0 281 281 0 0 chr2 32538621 32538678 -220717905 - MER5A DNA MER1_type -130 59 3 485 118 0 0 chr2 32538758 32538826 -220717757 + AluJb SINE Alu 48 115 -197 333 237 18 25 chr2 32538862 32538980 -220717603 + GA-rich Low_complexity Low_complexity 1 118 -395 2144 91 0 4 chr2 32538980 32539256 -220717327 + AluSx SINE Alu 1 275 -37 333 237 18 25 chr2 32539256 32539379 -220717204 + GA-rich Low_complexity Low_complexity 118 513 0 307 373 86 4 chr2 32539420 32539664 -220716919 - L3 LINE CR1 -243 1334 1071 1061 223 23 0 chr2 32540428 32540643 -220715940 + MER58A DNA MER1_type 1 220 -4 386 335 116 6 chr2 32541242 32541415 -220715168 - MIR3 SINE MIR -1 207 16 517 215 46 39 chr2 32541476 32541606 -220714977 - FLAM_A SINE Alu -2 131 1 2790 7 0 0 chr2 32541740 32542048 -220714535 - AluYa5 SINE Alu -3 308 1 1792 216 99 43 chr2 32542100 32542726 -220713857 + L1ME4a LINE L1 5457 6117 -4 234 0 0 0 chr2 32543116 32543142 -220713441 + (T)n Simple_repeat Simple_repeat 1 26 0 24 53 0 0 chr2 32543593 32543631 -220712952 + AT_rich Low_complexity Low_complexity 1 38 0 207 186 0 0 chr2 32545883 32545926 -220710657 + A-rich Low_complexity Low_complexity 1 43 0 2129 125 0 3 chr2 32546517 32546806 -220709777 - AluSx SINE Alu -24 288 1 186 43 0 0 chr2 32547199 32547222 -220709361 + (TTTTTG)n Simple_repeat Simple_repeat 4 26 0 200 210 0 16 chr2 32547423 32547485 -220709098 + (CATATA)n Simple_repeat Simple_repeat 2 62 0 2176 112 0 0 chr2 32547660 32547945 -220708638 + AluSx SINE Alu 1 285 -27 261 0 0 0 chr2 32547945 32547974 -220708609 + (CA)n Simple_repeat Simple_repeat 2 30 0 28 0 0 0 chr2 32550727 32550755 -220705828 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr2 32551002 32551033 -220705550 + AT_rich Low_complexity Low_complexity 1 31 0 26 0 0 0 chr2 32551151 32551177 -220705406 + AT_rich Low_complexity Low_complexity 1 26 0 240 258 86 32 chr2 32551364 32551457 -220705126 + L2 LINE L2 2181 2278 -1036 736 305 98 38 chr2 32551466 32551614 -220704969 + L2 LINE L2 2496 2634 -679 2154 103 3 7 chr2 32551614 32551915 -220704668 - AluSx SINE Alu -12 300 1 736 305 98 38 chr2 32551915 32552519 -220704064 + L2 LINE L2 2634 3308 -5 723 289 67 63 chr2 32552520 32552980 -220703603 + L2 LINE L2 2285 2746 -568 504 224 182 42 chr2 32553042 32553234 -220703349 - L2 LINE L2 -3 3310 3092 294 246 178 0 chr2 32553243 32553361 -220703222 + MER20B DNA MER1_type 31 169 -614 1415 208 86 12 chr2 32553415 32553833 -220702750 + MER20B DNA MER1_type 259 707 -76 774 272 122 64 chr2 32553836 32554399 -220702184 - L2 LINE L2 -15 3298 2626 514 267 0 22 chr2 32554399 32554534 -220702049 - L2 LINE L2 -879 2435 2304 188 74 37 0 chr2 32555123 32555150 -220701433 + L2 LINE L2 1867 1894 -1420 1183 195 87 0 chr2 32555462 32555760 -220700823 - MER33 DNA MER1_type 0 324 1 303 360 101 7 chr2 32555969 32556108 -220700475 + L2 LINE L2 3109 3260 -12 359 343 37 0 chr2 32556539 32556673 -220699910 - MIR3 SINE MIR -7 201 63 21 0 0 0 chr2 32556722 32556743 -220699840 + AT_rich Low_complexity Low_complexity 1 21 0 1303 172 0 21 chr2 32556748 32556981 -220699602 + AluJb SINE Alu 84 311 -1 22 0 0 0 chr2 32557069 32557091 -220699492 + AT_rich Low_complexity Low_complexity 1 22 0 1934 154 0 16 chr2 32557136 32557448 -220699135 + AluJb SINE Alu 1 307 -5 1534 171 26 43 chr2 32557655 32557790 -220698793 + AluJo SINE Alu 2 138 -174 1786 145 3 3 chr2 32557790 32558098 -220698485 + AluJb SINE Alu 1 308 0 1534 171 26 43 chr2 32558098 32558266 -220698317 + AluJo SINE Alu 138 301 -11 22 0 0 0 chr2 32558549 32558571 -220698012 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr2 32558852 32558889 -220697694 + AT_rich Low_complexity Low_complexity 1 37 0 28 0 0 0 chr2 32559979 32560007 -220696576 + AT_rich Low_complexity Low_complexity 1 28 0 2311 112 0 0 chr2 32561044 32561348 -220695235 - AluSx SINE Alu -8 304 1 26 30 0 0 chr2 32562208 32562241 -220694342 + AT_rich Low_complexity Low_complexity 1 33 0 24 32 0 0 chr2 32562437 32562468 -220694115 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr2 32562554 32562575 -220694008 + AT_rich Low_complexity Low_complexity 1 21 0 218 217 133 12 chr2 32563382 32563465 -220693118 - MIR SINE MIR -44 218 126 510 231 128 0 chr2 32564110 32564227 -220692356 - FLAM_A SINE Alu 0 133 2 910 171 18 77 chr2 32566616 32566838 -220689745 - MER20B DNA MER1_type -2 217 9 226 179 0 75 chr2 32566932 32566999 -220689584 - 7SK RNA RNA -99 94 33 22 56 0 0 chr2 32568873 32568909 -220687674 + AT_rich Low_complexity Low_complexity 1 36 0 381 314 70 12 chr2 32569486 32569658 -220686925 + MIR SINE MIR 1 182 -80 246 270 78 32 chr2 32569996 32570093 -220686490 + L1MB7 LINE L1 91 182 -6673 186 43 0 0 chr2 32570093 32570116 -220686467 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 246 270 78 32 chr2 32570116 32570239 -220686344 + L1MB7 LINE L1 182 549 -6306 428 189 11 22 chr2 32570731 32570821 -220685762 - FLAM_A SINE Alu -13 129 41 246 349 0 12 chr2 32570825 32570911 -220685672 + L1MB7 LINE L1 1105 1189 -5666 1791 241 89 28 chr2 32570974 32571766 -220684817 + L1MB7 LINE L1 1206 2036 -4881 2524 40 7 3 chr2 32571766 32572070 -220684513 - AluY SINE Alu -5 306 2 1791 241 89 28 chr2 32572070 32572124 -220684459 + L1MB7 LINE L1 2036 2085 -4832 1680 194 56 56 chr2 32572125 32572280 -220684303 + L1MB7 LINE L1 5712 5866 -1091 795 266 47 0 chr2 32572280 32572494 -220684089 - MER58A DNA MER1_type 0 224 1 1680 194 56 56 chr2 32572494 32572838 -220683745 + L1MB7 LINE L1 5865 6211 -746 * 14705 101 8 1 chr2 32572827 32574949 -220681634 - L1PA7 LINE L1 -1667 4479 2342 6956 60 6 3 chr2 32574949 32576623 -220679960 + L1PA7 LINE L1 4476 6154 0 2760 195 85 59 chr2 32576623 32577018 -220679565 + L1MB7 LINE L1 6198 6581 -414 2220 122 0 3 chr2 32577018 32577330 -220679253 + AluSx SINE Alu 1 311 -1 2760 195 85 59 chr2 32577330 32577553 -220679030 + L1MB7 LINE L1 6581 6797 -198 2202 111 0 7 chr2 32577553 32577850 -220678733 + AluSx SINE Alu 1 295 -17 2760 195 85 59 chr2 32577850 32577921 -220678662 + L1MB7 LINE L1 6797 6865 -130 607 149 8 82 chr2 32577921 32578055 -220678528 + FLAM_A SINE Alu 2 125 -8 1791 132 70 0 chr2 32578065 32578338 -220678245 + AluSx SINE Alu 3 294 -18 2760 195 85 59 chr2 32578338 32578403 -220678180 + L1MB7 LINE L1 6873 6985 -10 196 295 71 27 chr2 32578424 32578536 -220678047 + MIR SINE MIR 61 177 -85 629 135 0 0 chr2 32578671 32578775 -220677808 - FRAM SINE Alu -3 173 70 48 72 0 0 chr2 32578947 32579044 -220677539 + AT_rich Low_complexity Low_complexity 1 97 0 866 183 50 135 chr2 32580070 32580405 -220676178 + MER68 LTR ERV1 11 357 -248 1149 136 52 11 chr2 32580431 32580636 -220675947 - MER1B DNA MER1_type -76 221 35 1943 156 0 0 chr2 32580880 32581181 -220675402 + AluJb SINE Alu 1 301 -11 2103 97 13 19 chr2 32581889 32582198 -220674385 - AluSg SINE Alu -3 307 1 198 0 0 0 chr2 32582212 32582234 -220674349 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 2218 113 0 3 chr2 32582242 32582551 -220674032 - AluSg SINE Alu -2 308 1 198 362 29 14 chr2 32582581 32582719 -220673864 + L2 LINE L2 2716 2855 -459 254 368 79 12 chr2 32583078 32583331 -220673252 + L2 LINE L2 3016 3285 -28 1673 162 37 0 chr2 32583443 32583715 -220672868 + AluJb SINE Alu 3 284 -28 366 23 0 0 chr2 32583715 32583758 -220672825 + (CA)n Simple_repeat Simple_repeat 2 44 0 4167 200 79 89 chr2 32584294 32586507 -220670076 + L1MC2 LINE L1 3 2236 -4190 1732 175 10 7 chr2 32586507 32586810 -220669773 + AluJb SINE Alu 1 304 -8 4167 200 79 89 chr2 32586810 32587049 -220669534 + L1MC2 LINE L1 2236 4908 -1518 2338 157 40 42 chr2 32587039 32587542 -220669041 + L1MC2 LINE L1 6015 6516 -108 * 1215 172 5 18 chr2 32587651 32587872 -220668711 - AluJb SINE Alu -94 218 1 1999 109 3 26 chr2 32587980 32588283 -220668300 + AluSx SINE Alu 1 296 -16 1362 143 0 27 chr2 32588237 32588461 -220668122 + AluSq SINE Alu 85 302 -11 1930 84 98 0 chr2 32588925 32589199 -220667384 + AluSc SINE Alu 1 301 -8 38 51 0 0 chr2 32589446 32589505 -220667078 + AT_rich Low_complexity Low_complexity 1 59 0 361 286 82 48 chr2 32589563 32589710 -220666873 - L2 LINE L2 0 3272 3121 506 255 73 114 chr2 32589785 32590204 -220666379 + MLT1H LTR MaLR 80 478 -71 2147 131 61 0 chr2 32590204 32590564 -220666019 + L1MA2 LINE L1 5923 6304 0 506 255 73 114 chr2 32590564 32590634 -220665949 + MLT1H LTR MaLR 478 549 0 1379 194 4 33 chr2 32590638 32590911 -220665672 + AluJo SINE Alu 39 303 -9 801 163 14 21 chr2 32590914 32591055 -220665528 + AluJo/FRAM SINE Alu 137 276 -36 400 293 33 43 chr2 32591267 32591473 -220665110 + MLT1H LTR MaLR 20 234 -315 267 249 129 57 chr2 32591622 32591834 -220664749 + MLT1H LTR MaLR 322 567 0 1672 185 0 10 chr2 32592151 32592453 -220664130 - AluJb SINE Alu -9 303 5 413 315 70 51 chr2 32592709 32593023 -220663560 + L3 LINE CR1 680 999 -578 21 57 0 0 chr2 32593238 32593273 -220663310 + AT_rich Low_complexity Low_complexity 1 35 0 526 198 0 10 chr2 32593273 32593369 -220663214 - L2 LINE L2 -32 3240 3146 278 399 14 14 chr2 32593363 32593506 -220663077 + L3 LINE CR1 1430 1572 -5 * 206 310 14 0 chr2 32594101 32594172 -220662411 + A-rich Low_complexity Low_complexity 2 73 0 183 114 0 0 chr2 32595035 32595070 -220661513 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 980 208 7 91 chr2 32595073 32595381 -220661202 - AluJb SINE Alu -30 282 1 1846 161 10 24 chr2 32595465 32595763 -220660820 + AluJo SINE Alu 1 294 -18 301 278 0 44 chr2 32595763 32595878 -220660705 + (TATATG)n Simple_repeat Simple_repeat 1 109 0 303 93 0 0 chr2 32595878 32595921 -220660662 + (TG)n Simple_repeat Simple_repeat 1 43 0 25 31 0 0 chr2 32596230 32596262 -220660321 + AT_rich Low_complexity Low_complexity 1 32 0 182 271 35 90 chr2 32596262 32596406 -220660177 - MIR SINE MIR -40 222 87 899 222 54 42 chr2 32596955 32597302 -220659281 + MLT1B LTR MaLR 1 374 0 5321 147 24 2 chr2 32598404 32599279 -220657304 - L1PA15 LINE L1 -5 6160 5267 467 340 94 26 chr2 32600831 32601096 -220655487 + L2 LINE L2 2681 2963 -351 2352 86 3 3 chr2 32601124 32601428 -220655155 + AluSg SINE Alu 1 304 -6 4055 203 99 65 chr2 32601500 32602013 -220654570 + Charlie1a DNA MER1_type 1 495 -2266 1822 159 10 19 chr2 32602013 32602322 -220654261 + AluJo SINE Alu 1 306 -6 4055 203 99 65 chr2 32602322 32602496 -220654087 + Charlie1a DNA MER1_type 495 662 -2099 2044 107 11 0 chr2 32602496 32602815 -220653768 + AluSq SINE Alu 2 323 0 4055 203 99 65 chr2 32602815 32602977 -220653606 + Charlie1a DNA MER1_type 662 817 -1944 2105 101 32 0 chr2 32602977 32603254 -220653329 + AluSc SINE Alu 1 286 -23 4055 203 99 65 chr2 32603254 32603808 -220652775 + Charlie1a DNA MER1_type 817 1455 0 378 336 55 0 chr2 32603880 32604008 -220652575 + L2 LINE L2 3134 3268 -4 2172 127 0 13 chr2 32604189 32604504 -220652079 + AluSx SINE Alu 1 311 -1 21 0 0 0 chr2 32604611 32604632 -220651951 + AT_rich Low_complexity Low_complexity 1 21 0 292 216 34 34 chr2 32604862 32604950 -220651633 - L1ME LINE L1 -467 5654 5567 1746 152 7 14 chr2 32605906 32606195 -220650388 + AluSx SINE Alu 1 287 -25 21 36 0 0 chr2 32606198 32606226 -220650357 + AT_rich Low_complexity Low_complexity 1 28 0 2045 90 10 50 chr2 32606585 32606885 -220649698 - AluSx SINE Alu -22 290 3 1642 192 17 3 chr2 32608361 32608663 -220647920 - AluJb SINE Alu -6 306 1 488 232 26 53 chr2 32608906 32609096 -220647487 + L1ME2 LINE L1 5752 5936 -228 978 155 28 22 chr2 32609096 32609277 -220647306 + FRAM SINE Alu 1 176 0 288 0 0 0 chr2 32609280 32609312 -220647271 + (TA)n Simple_repeat Simple_repeat 1 32 0 492 246 84 0 chr2 32609369 32609511 -220647072 + L1MA10 LINE L1 6174 6327 -7 343 182 15 0 chr2 32610346 32610412 -220646171 + Alu SINE Alu 235 301 0 1090 232 24 0 chr2 32610925 32611171 -220645412 - MIR SINE MIR 0 262 11 2313 103 0 0 chr2 32611880 32612190 -220644393 - AluSg SINE Alu 0 310 1 21 36 0 0 chr2 32613512 32613540 -220643043 + AT_rich Low_complexity Low_complexity 1 28 0 2489 62 0 7 chr2 32614293 32614601 -220641982 + AluY SINE Alu 1 306 -5 1922 149 10 3 chr2 32614715 32615010 -220641573 - AluJb SINE Alu -13 299 3 217 250 28 0 chr2 32615152 32615224 -220641359 + (TATATG)n Simple_repeat Simple_repeat 3 76 0 3886 242 70 41 chr2 32615593 32616487 -220640096 + L2 LINE L2 1567 2525 -788 1489 171 44 18 chr2 32616487 32616761 -220639822 - AluJo SINE Alu -31 281 1 3886 242 70 41 chr2 32616761 32617482 -220639101 + L2 LINE L2 2525 3224 -89 388 288 65 20 chr2 32617573 32617726 -220638857 - MIR SINE MIR -54 208 49 1686 146 16 57 chr2 32618435 32618750 -220637833 - AluJb SINE Alu -10 302 1 1902 130 0 0 chr2 32618953 32619223 -220637360 + AluSx SINE Alu 43 312 0 1078 258 168 113 chr2 32619723 32620330 -220636253 + L2 LINE L2 739 1516 -1798 498 217 11 0 chr2 32620330 32620422 -220636161 - MER81 DNA DNA -21 93 1 1078 258 168 113 chr2 32620422 32620777 -220635806 + L2 LINE L2 1516 1850 -1464 496 327 127 16 chr2 32621028 32621398 -220635185 - L1ME3A LINE L1 -222 5948 5538 3243 184 69 6 chr2 32621398 32622063 -220634520 + MER67C LTR ERV1 1 707 -3 331 277 38 63 chr2 32622070 32622229 -220634354 - L1ME3A LINE L1 -2499 5543 5389 1707 158 38 38 chr2 32622430 32622508 -220634075 + MER7A DNA MER2_type 2 79 -2959 1633 138 80 4 chr2 32622508 32622783 -220633800 + AluSx SINE Alu 1 296 -16 1707 158 38 38 chr2 32622783 32623051 -220633532 + MER7A DNA MER2_type 78 346 0 442 268 176 7 chr2 32623900 32624053 -220632530 - MER5A DNA MER1_type -6 183 5 1300 154 0 0 chr2 32624549 32624737 -220631846 + AluSx SINE Alu 5 192 -120 6725 87 29 33 chr2 32624803 32625857 -220630726 + L1MA1 LINE L1 5254 6302 0 597 200 32 19 chr2 32625870 32626025 -220630558 - HsTC2a DNA Tc2 -21 721 565 2112 126 7 0 chr2 32626028 32626329 -220630254 + AluSx SINE Alu 2 304 -8 2172 118 6 13 chr2 32626365 32626678 -220629905 + AluSx SINE Alu 1 311 -1 1551 250 76 46 chr2 32626712 32627280 -220629303 - HsTC2a DNA Tc2 -156 588 4 2204 116 3 3 chr2 32627449 32627759 -220628824 - AluSg SINE Alu 0 310 1 24 32 0 0 chr2 32628050 32628081 -220628502 + AT_rich Low_complexity Low_complexity 1 31 0 562 265 42 76 chr2 32628776 32629016 -220627567 - L1ME4a LINE L1 -216 5905 5658 2176 107 7 3 chr2 32629016 32629314 -220627269 + AluSg SINE Alu 1 299 -11 562 265 42 76 chr2 32629314 32629383 -220627200 - L1ME4a LINE L1 -463 5658 5607 2293 106 0 3 chr2 32629383 32629685 -220626898 - AluSx SINE Alu -11 301 1 562 265 42 76 chr2 32629685 32629729 -220626854 - L1ME4a LINE L1 -514 5607 5563 738 144 0 0 chr2 32630230 32630341 -220626242 + FLAM_C SINE Alu 1 111 -32 25 0 0 0 chr2 32630375 32630400 -220626183 + AT_rich Low_complexity Low_complexity 1 25 0 282 363 64 12 chr2 32630423 32630479 -220626104 + MER5A DNA MER1_type 10 62 -127 2123 139 0 3 chr2 32630479 32630782 -220625801 + AluSq SINE Alu 1 302 -11 282 363 64 12 chr2 32630782 32630889 -220625694 + MER5A DNA MER1_type 62 185 -4 1554 121 22 5 chr2 32630889 32631112 -220625471 + AluJb SINE Alu 3 229 -83 182 62 31 0 chr2 32631121 32631153 -220625430 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 2128 130 3 0 chr2 32631529 32631836 -220624747 - AluSq SINE Alu -5 308 1 231 308 17 33 chr2 32632520 32632640 -220623943 + L1ME LINE L1 5732 5849 -1959 2153 119 0 7 chr2 32632790 32633092 -220623491 + AluSc SINE Alu 1 300 -9 242 308 11 0 chr2 32633220 32633311 -220623272 + L1ME LINE L1 5773 5864 -257 1687 172 7 0 chr2 32634562 32634878 -220621705 - AluJb SINE Alu 0 318 1 1662 154 92 0 chr2 32635868 32636141 -220620442 + AluSx SINE Alu 1 298 -14 1967 134 0 0 chr2 32636538 32636814 -220619769 - AluSx SINE Alu -36 276 1 1977 132 10 3 chr2 32637003 32637292 -220619291 + AluSx SINE Alu 1 291 -21 480 290 89 54 chr2 32637337 32637409 -220619174 - MIR SINE MIR -3 259 191 1650 181 0 48 chr2 32637409 32637719 -220618864 + AluJb SINE Alu 1 295 -17 480 290 89 54 chr2 32637719 32637870 -220618713 - MIR SINE MIR -71 191 28 203 212 15 183 chr2 32637838 32637975 -220618608 + MIR3 SINE MIR 47 160 -48 * 1770 156 19 19 chr2 32638035 32638343 -220618240 + AluJb SINE Alu 1 308 -4 253 91 0 0 chr2 32638667 32638700 -220617883 + L1MC5 LINE L1 6768 6800 -1161 1283 256 48 28 chr2 32638700 32639201 -220617382 + MLT2B3 LTR ERVL 1 510 -44 350 126 0 0 chr2 32639265 32639319 -220617264 + MLT2D LTR ERVL 367 413 -1 911 206 22 80 chr2 32639376 32639652 -220616931 + L1MC5 LINE L1 6975 7234 -727 1362 173 42 39 chr2 32639725 32640031 -220616552 + MER33 DNA MER1_type 1 307 -17 201 154 0 0 chr2 32640154 32640193 -220616390 + (CA)n Simple_repeat Simple_repeat 2 40 0 376 213 99 91 chr2 32640196 32640343 -220616240 + L1MC5 LINE L1 7451 7602 -359 2241 82 0 20 chr2 32640343 32640662 -220615921 + AluSp SINE Alu 1 313 0 376 213 99 91 chr2 32640662 32640777 -220615806 + L1MC5 LINE L1 7602 7715 -246 258 208 0 0 chr2 32640811 32640859 -220615724 + L1MC5 LINE L1 7709 7756 -205 2029 143 10 0 chr2 32640860 32641161 -220615422 + AluSq SINE Alu 1 304 -9 386 202 0 11 chr2 32641173 32641267 -220615316 + GA-rich Low_complexity Low_complexity 4 96 0 247 265 73 103 chr2 32641506 32641568 -220615015 + MIR SINE MIR 77 139 -123 2710 61 38 12 chr2 32641568 32641912 -220614671 + L1PA10 LINE L1 5812 6164 -4 247 265 73 103 chr2 32641912 32641985 -220614598 + MIR SINE MIR 139 208 -54 189 267 0 0 chr2 32642040 32642085 -220614498 - MIR3 SINE MIR -41 167 123 2138 116 3 10 chr2 32642377 32642688 -220613895 + AluSx SINE Alu 1 309 -3 2504 49 3 7 chr2 32643048 32643352 -220613231 - AluY SINE Alu -8 303 1 1768 163 21 7 chr2 32643385 32643673 -220612910 - AluJb SINE Alu -20 292 1 214 184 48 6 chr2 32644138 32644192 -220612391 + MIR SINE MIR 107 160 -62 25 65 0 0 chr2 32644843 32644889 -220611694 + AT_rich Low_complexity Low_complexity 1 46 0 22 70 0 0 chr2 32644950 32644993 -220611590 + AT_rich Low_complexity Low_complexity 1 43 0 249 185 17 118 chr2 32645147 32645266 -220611317 + L1ME4a LINE L1 5858 5964 -157 225 229 25 90 chr2 32645280 32645402 -220611181 - L1MC4 LINE L1 -1339 6703 6590 507 17 0 0 chr2 32645503 32645563 -220611020 + (TG)n Simple_repeat Simple_repeat 2 61 0 1380 188 88 0 chr2 32645563 32645824 -220610759 - AluJo SINE Alu -28 284 1 2028 119 7 0 chr2 32645920 32646198 -220610385 - AluSx SINE Alu -32 280 1 198 265 0 20 chr2 32646394 32646443 -220610140 - L2 LINE L2 -5 3267 3220 2132 116 3 0 chr2 32646651 32646945 -220609638 + AluSx SINE Alu 1 295 -17 1511 172 77 11 chr2 32647185 32647458 -220609125 - AluJo SINE Alu -21 291 1 701 197 0 8 chr2 32647465 32647587 -220608996 - FLAM_A SINE Alu -4 138 18 2164 106 0 0 chr2 32647616 32647926 -220608657 + AluSx SINE Alu 1 310 0 2215 120 0 0 chr2 32648357 32648648 -220607935 + AluSx SINE Alu 1 291 -21 4873 161 33 15 chr2 32648651 32649100 -220607483 + L1MB5 LINE L1 5199 5639 -535 2373 102 0 0 chr2 32649100 32649404 -220607179 + AluSx SINE Alu 1 304 -8 4873 161 33 15 chr2 32649404 32649908 -220606675 + L1MB5 LINE L1 5639 6166 -8 186 71 0 0 chr2 32650011 32650039 -220606544 + (TCCC)n Simple_repeat Simple_repeat 2 29 0 1905 121 0 72 chr2 32650393 32650725 -220605858 + AluSc SINE Alu 1 308 -1 2335 101 0 3 chr2 32650817 32651124 -220605459 + AluSq SINE Alu 1 306 -7 1023 168 35 0 chr2 32651816 32651989 -220604594 - AluSg/x SINE Alu -3 307 129 2075 134 7 0 chr2 32652224 32652523 -220604060 + AluSx SINE Alu 1 301 -11 1734 127 31 65 chr2 32653422 32653751 -220602832 - AluSx SINE Alu 0 320 2 259 253 409 0 chr2 32653903 32654033 -220602550 + MIR SINE MIR 1 77 -185 2089 137 0 3 chr2 32654033 32654340 -220602243 + AluSx SINE Alu 1 306 -6 259 253 409 0 chr2 32654340 32654395 -220602188 + MIR SINE MIR 77 262 0 1154 179 124 13 chr2 32654414 32654648 -220601935 - AluJo SINE Alu -52 260 1 1616 182 79 10 chr2 32654905 32655252 -220601331 - THE1C LTR MaLR -1 431 3 26 50 0 0 chr2 32655397 32655437 -220601146 + AT_rich Low_complexity Low_complexity 1 40 0 443 140 75 11 chr2 32655491 32655584 -220600999 + L1MB3 LINE L1 6078 6176 -7 24 32 0 0 chr2 32655584 32655615 -220600968 + AT_rich Low_complexity Low_complexity 1 31 0 192 77 0 0 chr2 32655938 32655964 -220600619 + (A)n Simple_repeat Simple_repeat 1 26 0 31 20 0 20 chr2 32656062 32656079 -220600504 + AT_rich Low_complexity Low_complexity 1 17 -31 1562 201 0 10 chr2 32656079 32656373 -220600210 + AluJo SINE Alu 2 292 -20 31 20 0 20 chr2 32656373 32656404 -220600179 + AT_rich Low_complexity Low_complexity 17 48 0 4241 203 105 103 chr2 32657784 32657945 -220598638 + L1MC3 LINE L1 6085 6244 -1541 2274 99 0 3 chr2 32657945 32658238 -220598345 + AluSc SINE Alu 1 292 -17 2382 81 3 0 chr2 32658238 32658536 -220598047 + AluSg SINE Alu 1 299 -11 4241 203 105 103 chr2 32658536 32658885 -220597698 + L1MC3 LINE L1 6244 6591 -1194 2047 103 0 71 chr2 32658885 32659196 -220597387 + AluSx SINE Alu 1 289 -23 4241 203 105 103 chr2 32659196 32659358 -220597225 + L1MC3 LINE L1 6591 6751 -1034 2277 95 3 3 chr2 32659358 32659662 -220596921 - AluSp SINE Alu -9 304 1 4241 203 105 103 chr2 32659662 32660022 -220596561 + L1MC3 LINE L1 6751 7109 -676 280 258 0 15 chr2 32660022 32660088 -220596495 + MLT1F1 LTR MaLR 67 131 -436 4241 203 105 103 chr2 32660088 32660456 -220596127 + L1MC3 LINE L1 7109 7561 -224 2144 87 26 23 chr2 32660456 32660765 -220595818 + AluY SINE Alu 1 310 -1 4241 203 105 103 chr2 32660765 32660978 -220595605 + L1MC3 LINE L1 7561 7772 -13 2178 110 3 0 chr2 32661263 32661554 -220595029 - AluSx SINE Alu -20 292 1 816 199 0 0 chr2 32661775 32661906 -220594677 + FLAM_C SINE Alu 1 131 -12 614 86 0 0 chr2 32661930 32662011 -220594572 + HY1 scRNA scRNA 17 97 -15 1497 66 0 25 chr2 32662041 32662237 -220594346 + AluY SINE Alu 1 191 -120 1180 110 0 0 chr2 32662245 32662409 -220594174 + AluY SINE Alu 127 290 -21 508 326 86 50 chr2 32662517 32662934 -220593649 - L2 LINE L2 -10 3303 2872 1432 210 17 0 chr2 32662934 32663225 -220593358 - AluJo SINE Alu -14 298 3 243 300 29 0 chr2 32663522 32663592 -220592991 - L2 LINE L2 0 3272 3201 211 260 73 42 chr2 32663705 32663801 -220592782 - MER5A DNA MER1_type -2 187 89 2736 201 117 43 chr2 32664072 32664193 -220592390 + Charlie1 DNA MER1_type 35 146 -2615 2261 101 3 0 chr2 32664193 32664491 -220592092 + AluSx SINE Alu 1 299 -13 2736 201 117 43 chr2 32664491 32664853 -220591730 + Charlie1 DNA MER1_type 146 480 -2281 2302 81 3 66 chr2 32664853 32665187 -220591396 + AluSp SINE Alu 1 313 0 2736 201 117 43 chr2 32665187 32665586 -220590997 + Charlie1 DNA MER1_type 480 2274 -487 1874 135 25 36 chr2 32665681 32665763 -220590820 + Charlie1 DNA MER1_type 2264 2345 -416 1916 151 3 10 chr2 32665763 32666061 -220590522 + AluJb SINE Alu 1 296 -16 1874 135 25 36 chr2 32666061 32666340 -220590243 + Charlie1 DNA MER1_type 2345 2621 -140 703 174 0 0 chr2 32666377 32666486 -220590097 - AluY SINE Alu -9 302 194 799 159 23 15 chr2 32666503 32666635 -220589948 - FLAM_C SINE Alu 0 133 1 567 233 0 0 chr2 32666657 32666773 -220589810 + Charlie1 DNA MER1_type 2632 2747 -14 336 293 54 75 chr2 32666944 32667183 -220589400 + L1MC4a LINE L1 5833 6066 -1742 2305 84 7 0 chr2 32667219 32667516 -220589067 + AluSp SINE Alu 1 299 -14 28 0 0 0 chr2 32667545 32667573 -220589010 + AT_rich Low_complexity Low_complexity 1 28 0 953 197 11 22 chr2 32668142 32668325 -220588258 + MER58A DNA MER1_type 27 207 -17 2241 97 0 10 chr2 32668430 32668728 -220587855 + AluSx SINE Alu 1 295 -17 930 182 0 0 chr2 32668963 32669117 -220587466 + FRAM SINE Alu 9 162 -14 346 136 0 0 chr2 32669118 32669177 -220587406 + L1MC/D LINE L1 5378 5436 -2372 * 491 298 87 92 chr2 32669152 32669878 -220586705 + L1MEc LINE L1 10 738 -5658 2476 93 0 0 chr2 32669878 32670189 -220586394 - AluSx SINE Alu -1 311 1 491 298 87 92 chr2 32670189 32670276 -220586307 + L1MEc LINE L1 738 824 -5572 2159 117 0 3 chr2 32670276 32670588 -220585995 + AluSx SINE Alu 1 311 0 1785 129 4 0 chr2 32670595 32670851 -220585732 + AluJb SINE Alu 1 257 -55 491 298 87 92 chr2 32670851 32671098 -220585485 + L1MEc LINE L1 830 1077 -5319 2231 108 0 7 chr2 32671098 32671394 -220585189 + AluSx SINE Alu 1 294 -18 491 298 87 92 chr2 32671394 32671960 -220584623 + L1MEc LINE L1 1077 1638 -4758 328 203 29 0 chr2 32672026 32672095 -220584488 + AluSp SINE Alu 121 191 -112 443 87 14 0 chr2 32672095 32672164 -220584419 + (GA)n Simple_repeat Simple_repeat 1 70 0 533 257 29 38 chr2 32672166 32672199 -220584384 + L1MEc LINE L1 2553 2585 -3630 2101 123 13 0 chr2 32672199 32672499 -220584084 + AluSx SINE Alu 6 309 -3 533 257 29 38 chr2 32672499 32672675 -220583908 + L1MEc LINE L1 2585 2760 -3455 871 192 0 0 chr2 32672677 32672823 -220583760 - FRAM SINE Alu -30 146 1 283 296 8 16 chr2 32673057 32673182 -220583401 + L1M4 LINE L1 1564 1687 -4855 666 67 0 0 chr2 32673313 32673388 -220583195 - AluSg/x SINE Alu -162 148 74 718 317 108 21 chr2 32673535 32673869 -220582714 - L2 LINE L2 -372 2942 2580 1722 143 20 34 chr2 32673947 32674241 -220582342 - AluJb SINE Alu -22 290 1 2949 226 91 45 chr2 32674241 32674447 -220582136 + L2 LINE L2 1997 2192 -1121 2203 116 0 3 chr2 32674447 32674749 -220581834 + AluSg SINE Alu 1 301 -9 2949 226 91 45 chr2 32674749 32675309 -220581274 + L2 LINE L2 2192 2725 -588 1755 180 0 24 chr2 32675309 32675603 -220580980 + AluJo SINE Alu 1 287 -25 2949 226 91 45 chr2 32675603 32675811 -220580772 + L2 LINE L2 2725 3015 -298 1723 152 26 30 chr2 32675811 32676114 -220580469 - AluJo SINE Alu -10 302 1 2949 226 91 45 chr2 32676114 32676152 -220580431 + L2 LINE L2 3015 3050 -263 2467 65 0 7 chr2 32676152 32676458 -220580125 - AluY SINE Alu -7 304 1 1117 75 0 0 chr2 32676461 32676594 -220579989 - AluSq/x SINE Alu -180 133 1 301 119 0 0 chr2 32676731 32676773 -220579810 - MER4E LTR ERV1 -74 692 651 326 236 71 79 chr2 32676796 32676923 -220579660 + L2 LINE L2 3180 3305 -8 2529 43 0 7 chr2 32676961 32677266 -220579317 - AluY SINE Alu -7 304 2 27 73 0 0 chr2 32677315 32677370 -220579213 + AT_rich Low_complexity Low_complexity 1 55 0 234 304 56 28 chr2 32677471 32677587 -220578996 + MIR SINE MIR 1 127 -81 357 282 58 10 chr2 32677608 32677725 -220578858 + MIR SINE MIR 37 159 -49 2171 112 7 0 chr2 32677794 32678098 -220578485 + AluY SINE Alu 1 306 -5 272 303 0 0 chr2 32678098 32678187 -220578396 + L1MC4 LINE L1 6615 6703 -1339 247 179 45 0 chr2 32678162 32678229 -220578354 - L1MCa LINE L1 -4362 2064 1995 * 237 244 47 0 chr2 32678203 32678289 -220578294 - L1MC4 LINE L1 -1339 6983 6894 * 269 134 75 15 chr2 32678314 32678381 -220578202 + (CATATA)n Simple_repeat Simple_repeat 2 72 0 380 254 127 8 chr2 32678506 32678632 -220577951 + MIR SINE MIR 61 201 -61 381 271 34 8 chr2 32679357 32679475 -220577108 + L1ME3A LINE L1 6042 6162 -8 508 253 77 16 chr2 32679516 32679698 -220576885 + L1ME3A LINE L1 4973 5165 -981 911 135 0 0 chr2 32679698 32679824 -220576759 + AluJo SINE Alu 1 126 -186 1340 200 36 11 chr2 32679834 32680140 -220576443 + AluJo SINE Alu 1 313 0 1649 196 72 58 chr2 32680175 32680569 -220576014 + L1ME3A LINE L1 5216 5663 -507 2260 103 0 13 chr2 32680569 32680870 -220575713 + AluSx SINE Alu 1 297 -15 1649 196 72 58 chr2 32680870 32681093 -220575490 + L1ME3A LINE L1 5663 5882 -288 923 168 18 6 chr2 32681101 32681268 -220575315 + AluJo SINE Alu 136 304 -8 315 278 217 0 chr2 32681272 32681452 -220575131 + L1ME3A LINE L1 5895 6113 -57 275 347 32 11 chr2 32681698 32681793 -220574790 - L2 LINE L2 -7 3265 3169 377 357 95 37 chr2 32681841 32682282 -220574301 - L2 LINE L2 -220 3052 2566 243 162 0 0 chr2 32682317 32682354 -220574229 - MER5A DNA MER1_type -151 38 2 721 211 46 64 chr2 32682368 32682586 -220573997 - MER58C DNA MER1_type -1 214 1 2343 98 0 3 chr2 32682613 32682919 -220573664 + AluSg1 SINE Alu 1 305 -4 234 160 20 0 chr2 32683428 32683478 -220573105 - LTR66 LTR ERVL -166 444 394 2183 95 3 3 chr2 32684232 32684528 -220572055 + AluSg SINE Alu 1 296 -14 31 112 0 0 chr2 32685889 32686032 -220570551 + GC_rich Low_complexity Low_complexity 1 143 0 308 271 43 125 chr2 32686032 32686313 -220570270 - L1M2 LINE L1 -5446 1403 1146 212 68 0 68 chr2 32686318 32686362 -220570221 + (GGA)n Simple_repeat Simple_repeat 3 43 0 344 265 70 93 chr2 32686480 32686695 -220569888 + L1M2 LINE L1 713 922 -5927 202 164 15 104 chr2 32687368 32687435 -220569148 + MIR SINE MIR 117 177 -85 1611 168 7 26 chr2 32687704 32688008 -220568575 + AluJo SINE Alu 5 302 -10 2382 85 0 25 chr2 32688348 32688667 -220567916 - AluSx SINE Alu -1 311 1 563 258 56 26 chr2 32688946 32689116 -220567467 + MIR SINE MIR 38 212 -50 2067 114 13 3 chr2 32689656 32689954 -220566629 + AluSg SINE Alu 1 301 -9 246 156 0 0 chr2 32689932 32689996 -220566587 + GA-rich Low_complexity Low_complexity 1 64 0 497 206 89 93 chr2 32690001 32690129 -220566454 + L1MC4a LINE L1 5678 5805 -367 1538 161 31 49 chr2 32690129 32690415 -220566168 + AluJo SINE Alu 1 281 -31 * 2582 50 0 0 chr2 32690414 32690711 -220565872 - AluY SINE Alu -14 297 1 497 206 89 93 chr2 32690711 32690841 -220565742 + L1MC4a LINE L1 6101 5825 -347 1500 141 43 53 chr2 32691494 32691798 -220564785 + AluJo SINE Alu 1 301 -11 1827 104 14 34 chr2 32691830 32692127 -220564456 - AluSx SINE Alu -21 291 1 2318 85 0 0 chr2 32692805 32693111 -220563472 - AluSx SINE Alu -6 306 1 2155 111 7 0 chr2 32693263 32693570 -220563013 + AluSq SINE Alu 1 309 -4 1585 179 98 9 chr2 32693731 32694066 -220562517 + MLT1A1 LTR MaLR 1 365 0 1841 119 25 7 chr2 32694374 32694659 -220561924 + AluSc SINE Alu 1 290 -19 1877 144 3 23 chr2 32694666 32694971 -220561612 + AluJb SINE Alu 1 299 -13 978 139 7 0 chr2 32695016 32695190 -220561393 - AluSg/x SINE Alu 0 306 132 851 215 13 0 chr2 32695288 32695446 -220561137 + AluSg/x SINE Alu 128 287 -23 380 234 0 43 chr2 32695449 32695461 -220561122 - L1MC4 LINE L1 -1339 6703 6692 1997 105 7 23 chr2 32695461 32695765 -220560818 + AluSq SINE Alu 1 299 -14 380 234 0 43 chr2 32695765 32695846 -220560737 - L1MC4 LINE L1 -1350 6692 6614 * 408 283 0 0 chr2 32695766 32695858 -220560725 + L1MC4 LINE L1 6614 6705 -1337 225 159 0 0 chr2 32695859 32695903 -220560680 + (TA)n Simple_repeat Simple_repeat 1 44 0 187 293 17 0 chr2 32695912 32695970 -220560613 + MIR SINE MIR 49 107 -155 848 169 88 0 chr2 32695995 32696143 -220560440 + FRAM SINE Alu 1 155 -21 1233 199 13 55 chr2 32696145 32696452 -220560131 + AluJo SINE Alu 1 294 -18 542 224 20 20 chr2 32696480 32696632 -220559951 + L1MA10 LINE L1 6183 6334 0 234 221 106 88 chr2 32696635 32696748 -220559835 + MIR SINE MIR 138 252 -10 809 156 0 22 chr2 32696777 32696912 -220559671 + AluJo/FLAM SINE Alu 2 133 -169 1855 91 44 4 chr2 32696915 32697190 -220559393 + AluSx SINE Alu 1 286 -26 2230 103 0 3 chr2 32697324 32697634 -220558949 + AluSx SINE Alu 1 309 -3 217 176 20 0 chr2 32697718 32697769 -220558814 + T-rich Low_complexity Low_complexity 4 55 0 2059 131 0 0 chr2 32697860 32698157 -220558426 + AluSx SINE Alu 5 301 -11 2274 92 7 0 chr2 32698439 32698744 -220557839 - AluSg SINE Alu -3 307 1 535 150 71 114 chr2 32698823 32698963 -220557620 - MER20 DNA MER1_type 0 219 86 603 122 0 0 chr2 32698964 32699046 -220557537 + AluSg1 SINE Alu 1 82 -227 333 156 10 156 chr2 32699059 32699155 -220557428 - MER20 DNA MER1_type -137 82 1 540 278 108 10 chr2 32699326 32699520 -220557063 + MIR SINE MIR 50 262 0 308 284 0 37 chr2 32699572 32699653 -220556930 - MER5A DNA MER1_type -3 186 109 227 258 43 0 chr2 32700367 32700460 -220556123 - MARNA DNA Mariner -361 225 129 843 216 28 0 chr2 32700466 32700642 -220555941 + L1ME3A LINE L1 5990 6170 0 2143 104 3 0 chr2 32701112 32701401 -220555182 + AluSg SINE Alu 1 290 -20 1943 139 0 7 chr2 32701409 32701711 -220554872 + AluSg SINE Alu 1 300 -10 1589 184 7 7 chr2 32701754 32702047 -220554536 + AluJo SINE Alu 1 293 -19 1489 165 74 3 chr2 32702076 32702361 -220554222 + AluJb SINE Alu 1 305 -7 1713 122 13 69 chr2 32702437 32702761 -220553822 + AluSq SINE Alu 1 307 0 183 156 0 0 chr2 32702834 32702866 -220553717 + T-rich Low_complexity Low_complexity 1 32 0 392 100 43 250 chr2 32702866 32702922 -220553661 - HY1 scRNA scRNA -1 111 45 1881 142 17 0 chr2 32702922 32703218 -220553365 + AluSx SINE Alu 1 301 -11 392 100 43 250 chr2 32703218 32703231 -220553352 - HY1 scRNA scRNA -67 45 31 1777 106 0 4 chr2 32703231 32703477 -220553106 + AluSq SINE Alu 56 300 -13 392 100 43 250 chr2 32703477 32703546 -220553037 - HY1 scRNA scRNA -81 31 1 2384 60 7 0 chr2 32703556 32703856 -220552727 - AluY SINE Alu -9 302 1 991 139 6 35 chr2 32704036 32704209 -220552374 - FRAM SINE Alu -9 167 1 1840 106 38 0 chr2 32704449 32704713 -220551870 + AluSc SINE Alu 1 274 -35 1285 124 0 5 chr2 32704713 32704918 -220551665 + AluSg/x SINE Alu 103 308 -301 1943 130 3 0 chr2 32704918 32705203 -220551380 + AluSx SINE Alu 1 286 -26 1285 124 0 5 chr2 32705203 32705221 -220551362 + AluSg/x SINE Alu 308 609 0 22 0 0 0 chr2 32705993 32706015 -220550568 + AT_rich Low_complexity Low_complexity 1 22 0 589 221 7 0 chr2 32706065 32706205 -220550378 - MER113 DNA MER1_type? -223 298 158 1091 181 9 19 chr2 32706227 32706277 -220550306 + AluJb SINE Alu 85 134 -178 2355 66 0 0 chr2 32706277 32706578 -220550005 + AluY SINE Alu 1 301 -10 1091 181 9 19 chr2 32706578 32706743 -220549840 + AluJb SINE Alu 134 298 -14 2033 115 16 0 chr2 32707069 32707374 -220549209 + AluSg SINE Alu 1 310 0 914 183 0 27 chr2 32707374 32707541 -220549042 + AluSg/x SINE Alu 130 293 -17 2270 101 0 0 chr2 32707541 32707849 -220548734 + AluSg SINE Alu 1 308 -2 914 183 0 27 chr2 32707849 32707867 -220548716 + AluSg/x SINE Alu 293 310 0 782 161 0 0 chr2 32708507 32708619 -220547964 + FLAM_C SINE Alu 2 113 -30 23 42 0 21 chr2 32708623 32708644 -220547939 + AT_rich Low_complexity Low_complexity 1 21 -26 2128 101 0 0 chr2 32708644 32708931 -220547652 + AluSg SINE Alu 1 287 -23 23 42 0 21 chr2 32708931 32708957 -220547626 + AT_rich Low_complexity Low_complexity 21 47 0 2088 105 10 0 chr2 32708957 32709252 -220547331 + AluSx SINE Alu 1 298 -14 2105 100 7 0 chr2 32709319 32709618 -220546965 + AluSp SINE Alu 1 301 -12 1118 253 57 64 chr2 32709793 32710148 -220546435 + L1MEc LINE L1 136 489 -5907 2596 138 34 2 chr2 32710148 32710561 -220546022 - MSTB LTR MaLR 0 426 1 1118 253 57 64 chr2 32710561 32710644 -220545939 + L1MEc LINE L1 489 571 -5825 2034 121 13 0 chr2 32710646 32710944 -220545639 + AluSq SINE Alu 2 303 -10 452 70 0 0 chr2 32710948 32711005 -220545578 + AluSg/x SINE Alu 194 250 -62 1021 164 17 59 chr2 32711005 32711243 -220545340 + AluJo SINE Alu 85 312 0 1917 106 46 3 chr2 32711251 32711533 -220545050 + AluSc SINE Alu 2 295 -14 2012 142 3 0 chr2 32711580 32711891 -220544692 + AluSx SINE Alu 1 312 0 1640 166 25 0 chr2 32711912 32712195 -220544388 - AluJb SINE Alu -11 301 12 356 225 15 10 chr2 32712205 32712312 -220544271 + L1M2c LINE L1 1317 1798 -4585 2471 43 3 3 chr2 32712318 32712619 -220543964 + AluY SINE Alu 1 301 -10 1419 77 0 10 chr2 32712619 32712814 -220543769 + AluY SINE Alu 106 298 -13 995 261 126 29 chr2 32712816 32713230 -220543353 + L1MEc LINE L1 1399 1852 -4544 1224 159 49 9 chr2 32713239 32713465 -220543118 - AluJb SINE Alu -18 294 60 2180 93 17 0 chr2 32713490 32713781 -220542802 - AluSx SINE Alu -16 296 1 21 0 0 0 chr2 32713876 32713897 -220542686 + AT_rich Low_complexity Low_complexity 1 21 0 340 253 24 0 chr2 32713940 32714023 -220542560 - MIR SINE MIR -140 122 38 1689 79 162 26 chr2 32714064 32714329 -220542254 - AluSx SINE Alu -1 301 1 538 214 0 0 chr2 32714366 32714469 -220542114 - AluJb SINE Alu -30 282 180 2131 111 7 0 chr2 32714568 32714875 -220541708 - AluSx SINE Alu -2 310 2 2043 84 3 78 chr2 32716886 32717073 -220539510 - AluSg SINE Alu -12 298 143 2189 85 0 41 chr2 32717073 32717390 -220539193 - AluSc SINE Alu -4 305 2 2043 84 3 78 chr2 32717390 32717524 -220539059 - AluSg SINE Alu -167 143 1 701 147 199 0 chr2 32717874 32718009 -220538574 + AluJb SINE Alu 135 296 -16 450 194 163 10 chr2 32718009 32718107 -220538476 + AluY SINE Alu 1 113 -198 22 56 0 0 chr2 32718109 32718145 -220538438 + AT_rich Low_complexity Low_complexity 1 36 0 1029 197 24 5 chr2 32718304 32718517 -220538066 + AluJo SINE Alu 86 302 -10 2348 78 0 3 chr2 32718678 32718987 -220537596 - AluY SINE Alu -3 308 1 1908 121 17 3 chr2 32719121 32719410 -220537173 + AluSx SINE Alu 1 293 -19 1392 171 65 7 chr2 32719474 32719749 -220536834 + AluJb SINE Alu 1 291 -21 1724 82 129 0 chr2 32720165 32720421 -220536162 + AluSc SINE Alu 1 289 -20 1958 133 0 0 chr2 32720611 32720912 -220535671 + AluSx SINE Alu 1 301 -11 253 257 140 103 chr2 32720912 32720973 -220535610 + MIR SINE MIR 60 117 -145 2059 142 0 0 chr2 32720973 32721282 -220535301 - AluSx SINE Alu -3 309 1 253 257 140 103 chr2 32721282 32721356 -220535227 + MIR SINE MIR 117 200 -62 1508 165 49 7 chr2 32721366 32721651 -220534932 + AluJb SINE Alu 1 297 -15 1741 163 0 14 chr2 32721749 32722060 -220534523 - AluSx SINE Alu 0 307 1 2126 89 7 10 chr2 32722461 32722763 -220533820 + AluY SINE Alu 1 301 -10 1996 123 0 17 chr2 32722872 32723174 -220533409 + AluSx SINE Alu 3 299 -13 849 211 0 17 chr2 32723311 32723486 -220533097 - FAM SINE Alu -3 46 1 807 161 0 29 chr2 32723701 32723838 -220532745 + FLAM_C SINE Alu 1 133 0 2078 107 0 3 chr2 32723887 32724177 -220532406 + AluSx SINE Alu 1 289 -23 1693 135 0 105 chr2 32724243 32724577 -220532006 + AluJb SINE Alu 1 299 -3 1799 111 76 3 chr2 32724578 32724867 -220531716 + AluSx SINE Alu 2 311 -1 23 68 0 0 chr2 32724867 32724911 -220531672 + AT_rich Low_complexity Low_complexity 1 44 0 548 112 9 47 chr2 32724924 32725031 -220531552 + L1MA4 LINE L1 6194 6296 -4 2056 96 7 13 chr2 32725051 32725354 -220531229 - AluSx SINE Alu -11 301 1 317 260 55 0 chr2 32725388 32725461 -220531122 + L1ME LINE L1 5601 5677 -444 1904 137 3 0 chr2 32725576 32725868 -220530715 - AluSx SINE Alu -19 293 1 2348 71 0 0 chr2 32725974 32726283 -220530300 + AluY SINE Alu 1 309 -2 2102 68 0 83 chr2 32726288 32726612 -220529971 + AluSg SINE Alu 2 298 -12 2182 160 87 112 chr2 32726685 32726779 -220529804 + MER68 LTR ERV1 1 96 -466 2198 66 0 69 chr2 32726779 32727098 -220529485 - AluY SINE Alu -14 297 1 2182 160 87 112 chr2 32727098 32727118 -220529465 + MER68 LTR ERV1 96 115 -447 1809 101 4 8 chr2 32727118 32727376 -220529207 + AluSg SINE Alu 29 285 -25 2182 160 87 112 chr2 32727376 32727425 -220529158 + MER68 LTR ERV1 115 164 -398 1611 172 0 0 chr2 32727425 32727737 -220528846 - AluJb SINE Alu 0 312 1 2182 160 87 112 chr2 32727737 32728071 -220528512 + MER68 LTR ERV1 164 488 -74 1556 128 0 0 chr2 32728071 32728297 -220528286 + AluSg/x SINE Alu 69 294 -16 2182 160 87 112 chr2 32728297 32728369 -220528214 + MER68 LTR ERV1 488 560 -2 185 133 33 0 chr2 32728399 32728429 -220528154 - L2 LINE L2 -92 3221 3191 1506 180 0 44 chr2 32728532 32728826 -220527757 + AluJb SINE Alu 1 281 -31 978 78 0 0 chr2 32728829 32728957 -220527626 - AluSc SINE Alu -14 295 168 2359 70 3 0 chr2 32729251 32729551 -220527032 - AluSp SINE Alu -12 301 1 23 78 0 0 chr2 32729583 32729634 -220526949 + AT_rich Low_complexity Low_complexity 1 51 0 236 75 0 25 chr2 32729876 32729916 -220526667 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 901 196 0 6 chr2 32729918 32730081 -220526502 - AluSg/x SINE Alu -31 281 120 1794 138 0 40 chr2 32730089 32730225 -220526358 + AluSx SINE Alu 1 141 -182 2215 103 0 0 chr2 32730225 32730535 -220526048 + AluSq SINE Alu 1 310 -3 1794 138 0 40 chr2 32730535 32730733 -220525850 + AluSx SINE Alu 141 323 0 672 191 0 0 chr2 32730749 32730875 -220525708 + FRAM SINE Alu 41 166 -10 554 198 11 126 chr2 32730905 32731008 -220525575 + Charlie8 DNA MER1_type 116 191 -150 1760 164 7 3 chr2 32731008 32731306 -220525277 + AluJb SINE Alu 1 299 -13 554 198 11 126 chr2 32731306 32731384 -220525199 + Charlie8 DNA MER1_type 191 276 -65 26 30 0 0 chr2 32731798 32731831 -220524752 + AT_rich Low_complexity Low_complexity 1 33 0 635 186 110 0 chr2 32732224 32732342 -220524241 - FLAM_A SINE Alu 0 133 3 1474 174 3 48 chr2 32732984 32733278 -220523305 + AluJb SINE Alu 1 281 -31 1977 127 0 13 chr2 32733445 32733745 -220522838 - AluSx SINE Alu -16 296 1 1504 272 53 30 chr2 32733863 32734397 -220522186 + MLT1H LTR MaLR 1 593 0 202 252 87 68 chr2 32734430 32734533 -220522050 - L2 LINE L2 -17 3296 3192 2122 103 7 3 chr2 32734686 32734988 -220521595 + AluSg SINE Alu 1 303 -7 1717 164 0 38 chr2 32735198 32735342 -220521241 + AluJb SINE Alu 1 149 -163 2077 91 3 14 chr2 32735342 32735638 -220520945 + AluSc SINE Alu 9 301 -8 1717 164 0 38 chr2 32735638 32735811 -220520772 + AluJb SINE Alu 149 306 -6 21 36 0 0 chr2 32735843 32735871 -220520712 + AT_rich Low_complexity Low_complexity 1 28 0 694 188 0 62 chr2 32735871 32736015 -220520568 + FLAM_C SINE Alu 3 137 -6 36 23 0 0 chr2 32736018 32736061 -220520522 + AT_rich Low_complexity Low_complexity 1 43 0 286 305 116 0 chr2 32736119 32736214 -220520369 - MIR SINE MIR -151 111 6 497 245 36 0 chr2 32736306 32736445 -220520138 + L1ME3A LINE L1 5727 5870 -300 771 164 17 0 chr2 32736457 32736573 -220520010 + AluJb SINE Alu 1 118 -194 26 30 0 0 chr2 32736578 32736611 -220519972 + AT_rich Low_complexity Low_complexity 1 33 0 2300 75 3 0 chr2 32736939 32737232 -220519351 - AluSp SINE Alu -19 294 1 1750 136 7 35 chr2 32737271 32737581 -220519002 - AluSx SINE Alu -11 301 1 920 117 0 7 chr2 32737726 32737863 -220518720 + AluJo SINE Alu 6 141 -171 1832 132 3 26 chr2 32737863 32738166 -220518417 + AluJb SINE Alu 5 300 -12 232 218 13 13 chr2 32738340 32738418 -220518165 + GA-rich Low_complexity Low_complexity 1 78 0 1196 92 0 6 chr2 32738953 32739126 -220517457 - AluSg/x SINE Alu -10 302 131 27 49 0 0 chr2 32739846 32739887 -220516696 + GC_rich Low_complexity Low_complexity 1 41 0 2267 88 0 0 chr2 32740952 32741246 -220515337 - AluSg SINE Alu -16 294 1 203 215 92 0 chr2 32741249 32741314 -220515269 - MIR SINE MIR -6 256 186 409 223 10 29 chr2 32741356 32741459 -220515124 - MIR SINE MIR -71 191 91 2049 130 3 3 chr2 32741899 32742198 -220514385 - AluSx SINE Alu -9 303 5 2219 117 0 0 chr2 32742316 32742607 -220513976 + AluSg SINE Alu 1 291 -19 2011 137 10 13 chr2 32742620 32742933 -220513650 + AluJo SINE Alu 1 312 0 2272 112 0 0 chr2 32742986 32743290 -220513293 - AluSx SINE Alu -8 304 1 31 0 0 0 chr2 32743553 32743584 -220512999 + AT_rich Low_complexity Low_complexity 1 31 0 569 171 29 48 chr2 32743584 32743689 -220512894 - AluJo SINE Alu -21 291 189 259 188 0 0 chr2 32743689 32743737 -220512846 - AluJo SINE Alu -170 132 85 2682 45 0 0 chr2 32743895 32744205 -220512378 - AluY SINE Alu 0 311 2 2212 111 0 7 chr2 32744254 32744552 -220512031 - AluSx SINE Alu -16 296 1 1117 116 12 6 chr2 32744673 32744837 -220511746 + AluSq SINE Alu 134 298 -15 2049 136 0 10 chr2 32744856 32745164 -220511419 + AluSx SINE Alu 1 305 -7 2369 81 0 10 chr2 32745480 32745787 -220510796 - AluY SINE Alu -7 304 1 2241 110 0 7 chr2 32745997 32746296 -220510287 - AluSx SINE Alu -15 297 1 992 230 0 5 chr2 32746572 32746776 -220509807 - AluJo SINE Alu -26 286 84 5238 140 46 27 chr2 32747368 32747962 -220508621 - MER4D LTR ERV1 -1 902 284 2395 84 0 3 chr2 32747962 32748271 -220508312 - AluY SINE Alu -3 308 1 5238 140 46 27 chr2 32748271 32748560 -220508023 - MER4D LTR ERV1 -619 284 2 810 174 0 0 chr2 32749129 32749261 -220507322 - AluSq/x SINE Alu -181 132 1 787 164 9 0 chr2 32749440 32749556 -220507027 - FLAM_C SINE Alu -25 118 2 2414 185 154 28 chr2 32749881 32750426 -220506157 - MER90 LTR ERV1 0 614 1 2191 130 0 3 chr2 32750428 32750735 -220505848 - AluSx SINE Alu -6 306 1 184 45 0 0 chr2 32750822 32750844 -220505739 + MIR SINE MIR 87 108 -154 205 194 28 0 chr2 32750871 32750907 -220505676 + L2 LINE L2 3218 3254 -18 2492 69 0 19 chr2 32751069 32751386 -220505197 + AluY SINE Alu 1 311 0 2159 116 3 13 chr2 32751469 32751779 -220504804 - AluSx SINE Alu -3 309 3 2245 125 0 0 chr2 32751825 32752129 -220504454 - AluSx SINE Alu -8 304 1 784 217 0 0 chr2 32752319 32752448 -220504135 - FLAM_C SINE Alu -12 131 3 635 210 0 0 chr2 32752689 32752789 -220503794 - FLAM_A SINE Alu -42 100 1 2372 99 0 0 chr2 32752800 32753102 -220503481 - AluSg SINE Alu -8 302 1 355 357 0 0 chr2 32753460 32753572 -220503011 - MIR SINE MIR -63 145 34 1564 177 13 57 chr2 32753781 32753887 -220502696 + AluJo SINE Alu 3 112 -200 2167 13 0 0 chr2 32753887 32754161 -220502422 - AluYa5 SINE Alu 0 311 58 1564 177 13 57 chr2 32754161 32754172 -220502411 + AluJo SINE Alu 112 122 -190 1543 129 0 17 chr2 32754172 32754404 -220502179 - AluSx SINE Alu -84 228 1 1564 177 13 57 chr2 32754404 32754585 -220501998 + AluJo SINE Alu 122 289 -23 1406 183 56 12 chr2 32754813 32755065 -220501518 - AluJb SINE Alu -45 267 5 1666 161 46 7 chr2 32755163 32755443 -220501140 + AluJb SINE Alu 1 291 -21 1329 174 24 12 chr2 32755494 32755741 -220500842 - AluJb SINE Alu -17 295 46 2387 152 63 11 chr2 32755775 32756226 -220500357 - L1M3 LINE L1 -428 5752 5281 273 288 15 0 chr2 32756280 32756346 -220500237 - MER58A DNA MER1_type -34 73 7 2116 129 0 22 chr2 32756712 32756890 -220499693 - AluY SINE Alu -1 310 141 2176 112 0 3 chr2 32756890 32757184 -220499399 - AluSg SINE Alu -16 294 2 2116 129 0 22 chr2 32757184 32757322 -220499261 - AluY SINE Alu -170 141 1 1851 90 8 4 chr2 32757494 32757738 -220498845 + AluSc SINE Alu 63 307 -2 1910 104 77 11 chr2 32757934 32758221 -220498362 - AluSq SINE Alu -7 306 1 2273 92 3 3 chr2 32758343 32758637 -220497946 + AluSp SINE Alu 2 295 -18 2161 200 45 58 chr2 32758642 32758865 -220497718 - L1ME1 LINE L1 -209 5957 5733 198 71 0 0 chr2 32758865 32758893 -220497690 + (TTG)n Simple_repeat Simple_repeat 2 29 0 2161 200 45 58 chr2 32758893 32758908 -220497675 - L1ME1 LINE L1 -433 5733 5719 2031 103 52 0 chr2 32758908 32759180 -220497403 - AluSg SINE Alu -20 290 5 2161 200 45 58 chr2 32759180 32759561 -220497022 - L1ME1 LINE L1 -447 5719 5345 601 66 0 41 chr2 32759584 32759706 -220496877 + (TA)n Simple_repeat Simple_repeat 1 117 0 2070 119 3 23 chr2 32759706 32760008 -220496575 - AluSx SINE Alu -16 296 1 302 252 38 54 chr2 32760069 32760088 -220496495 + L1MC/D LINE L1 5616 5634 -541 2152 68 39 14 chr2 32760088 32760392 -220496191 - AluY SINE Alu 0 311 1 302 252 38 54 chr2 32760392 32760532 -220496051 + L1MC/D LINE L1 5634 5768 -407 2310 108 0 7 chr2 32760532 32760839 -220495744 + AluSx SINE Alu 1 305 -7 1464 215 3 37 chr2 32761125 32761446 -220495137 - AluJb SINE Alu -2 310 1 2070 88 0 25 chr2 32761683 32761968 -220494615 + AluSg SINE Alu 1 278 -32 270 0 0 0 chr2 32761968 32761998 -220494585 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 1792 159 7 26 chr2 32762104 32762406 -220494177 + AluJo SINE Alu 1 296 -16 2067 112 27 10 chr2 32762409 32762704 -220493879 + AluSx SINE Alu 1 300 -12 195 42 0 0 chr2 32763573 32763597 -220492986 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1735 163 0 66 chr2 32763613 32763790 -220492793 - AluJo SINE Alu -2 310 123 285 29 0 0 chr2 32763790 32763824 -220492759 + (TTA)n Simple_repeat Simple_repeat 1 34 0 1973 130 0 14 chr2 32763825 32764109 -220492474 - AluSx SINE Alu -25 287 8 1735 163 0 66 chr2 32764109 32764261 -220492322 - AluJo SINE Alu -188 124 1 2317 103 3 0 chr2 32764291 32764593 -220491990 + AluSp SINE Alu 1 303 -10 333 210 175 7 chr2 32764595 32764738 -220491845 - HsTC2 DNA Tc2 -2 1896 1730 622 260 23 23 chr2 32764744 32764917 -220491666 - HsTC2 DNA Tc2 -1722 176 4 1235 171 133 38 chr2 32765002 32765265 -220491318 - AluJb SINE Alu -14 288 1 269 248 0 90 chr2 32765641 32765696 -220490887 - L1MC5 LINE L1 -36 7925 7867 2288 88 0 3 chr2 32765696 32765992 -220490591 - AluY SINE Alu -16 295 1 269 248 0 90 chr2 32765992 32766069 -220490514 - L1MC5 LINE L1 -94 7867 7805 960 233 48 0 chr2 32766070 32766276 -220490307 + MER58A DNA MER1_type 1 216 -8 1076 200 133 78 chr2 32766292 32766933 -220489650 - L1MC5 LINE L1 -160 7801 7126 211 324 0 0 chr2 32767105 32767173 -220489410 + MIR SINE MIR 79 146 -62 1835 112 20 0 chr2 32767174 32767478 -220489105 - AluSq SINE Alu 0 336 28 2435 69 0 7 chr2 32767479 32767783 -220488800 + AluY SINE Alu 1 302 -9 305 107 0 0 chr2 32767801 32767858 -220488725 - AluSq SINE Alu -259 40 2 2135 109 7 3 chr2 32768654 32768948 -220487635 + AluSx SINE Alu 1 295 -17 2391 58 0 32 chr2 32768949 32769262 -220487321 + AluYa5 SINE Alu 2 304 -7 1053 169 0 0 chr2 32769262 32769428 -220487155 + AluSg/x SINE Alu 133 298 -12 562 246 82 69 chr2 32769436 32769668 -220486915 + L2 LINE L2 3078 3312 -1 209 328 0 0 chr2 32769677 32769735 -220486848 + L2 LINE L2 3210 3267 -5 24 0 0 0 chr2 32769741 32769765 -220486818 + AT_rich Low_complexity Low_complexity 1 24 0 1101 105 0 0 chr2 32770150 32770293 -220486290 - AluSg/x SINE Alu -15 295 153 1485 245 80 51 chr2 32770303 32770616 -220485967 - L2 LINE L2 -234 3079 2725 2181 105 3 10 chr2 32770616 32770912 -220485671 + AluSx SINE Alu 1 294 -18 1485 245 80 51 chr2 32770912 32771152 -220485431 - L2 LINE L2 -588 2725 2493 1839 167 0 22 chr2 32771378 32771690 -220484893 + AluJo SINE Alu 1 305 -7 378 277 30 77 chr2 32771750 32771985 -220484598 - L2 LINE L2 -440 2874 2651 2220 112 0 0 chr2 32772083 32772379 -220484204 + AluSx SINE Alu 3 298 -14 2278 101 0 16 chr2 32773610 32773926 -220482657 - AluY SINE Alu 0 311 1 1620 167 19 4 chr2 32774113 32774383 -220482200 + AluJo SINE Alu 2 275 -37 27 49 0 0 chr2 32774550 32774591 -220481992 + AT_rich Low_complexity Low_complexity 1 41 0 211 220 0 0 chr2 32774656 32774706 -220481877 + T-rich Low_complexity Low_complexity 1 50 0 1959 122 104 6 chr2 32775461 32775788 -220480795 - L1MA5A LINE L1 -1 6296 5938 2918 98 16 5 chr2 32775791 32776219 -220480364 - L1MA5A LINE L1 -491 5806 5374 41230 69 7 4 chr2 32776396 32782511 -220474072 - L1PA5 LINE L1 -7 6147 11 1384 139 20 62 chr2 32783111 32783168 -220473415 + MER46A DNA MER2_type 1 59 -2672 1883 135 0 64 chr2 32783168 32783480 -220473103 - AluSx SINE Alu -20 292 1 1384 139 20 62 chr2 32783480 32783666 -220472917 + MER46A DNA MER2_type 59 234 -2 981 205 139 21 chr2 32783882 32784273 -220472310 + L1M4b LINE L1 1339 1760 -5095 315 283 33 0 chr2 32784348 32784440 -220472143 + L1ME1 LINE L1 6026 6120 -46 328 135 0 0 chr2 32784448 32784500 -220472083 - AluJb SINE Alu -7 295 244 1036 170 6 0 chr2 32784507 32784678 -220471905 - AluJb SINE Alu -140 172 1 2217 102 7 3 chr2 32784686 32784989 -220471594 - AluSc SINE Alu -5 304 1 2132 122 7 0 chr2 32785040 32785336 -220471247 - AluSx SINE Alu -14 298 1 225 247 36 109 chr2 32785346 32785593 -220470990 - HAL1 LINE L1 -48 2459 2231 21 36 0 0 chr2 32785593 32785621 -220470962 + AT_rich Low_complexity Low_complexity 1 28 0 491 215 0 18 chr2 32785649 32785812 -220470771 + (TA)n Simple_repeat Simple_repeat 1 160 0 241 170 21 106 chr2 32785814 32785908 -220470675 + L1MC4 LINE L1 6615 6700 -1342 236 217 0 12 chr2 32785939 32786022 -220470561 + (TA)n Simple_repeat Simple_repeat 1 82 0 2271 103 3 3 chr2 32786034 32786344 -220470239 - AluSg SINE Alu 0 310 1 559 62 0 110 chr2 32786416 32786792 -220469791 + (TA)n Simple_repeat Simple_repeat 1 334 0 265 136 60 87 chr2 32786824 32787008 -220469575 + (TATAG)n Simple_repeat Simple_repeat 2 180 0 * 361 124 0 114 chr2 32786988 32787189 -220469394 + (TA)n Simple_repeat Simple_repeat 1 178 0 270 110 55 71 chr2 32787210 32787392 -220469191 + (TATAG)n Simple_repeat Simple_repeat 2 180 0 227 229 92 28 chr2 32787592 32787701 -220468882 - L1MDa LINE L1 -4501 2039 1924 40 37 0 0 chr2 32787842 32787896 -220468687 + AT_rich Low_complexity Low_complexity 1 54 0 387 0 0 0 chr2 32787898 32787941 -220468642 + (TAG)n Simple_repeat Simple_repeat 1 43 0 1629 138 0 0 chr2 32787956 32788180 -220468403 - AluSx SINE Alu -88 224 1 388 129 0 0 chr2 32788180 32788242 -220468341 - L1MA1 LINE L1 -182 6120 6059 2275 114 0 0 chr2 32788274 32788573 -220468010 - AluSg SINE Alu -11 299 1 1370 141 173 0 chr2 32789063 32789312 -220467271 - AluJb SINE Alu -20 292 1 2312 108 0 3 chr2 32789488 32789793 -220466790 - AluSx SINE Alu -7 305 2 1133 108 0 0 chr2 32789860 32790018 -220466565 - AluSc SINE Alu 0 309 152 1499 159 51 48 chr2 32790050 32790345 -220466238 + AluJo SINE Alu 1 296 -16 26 50 0 0 chr2 32790444 32790484 -220466099 + AT_rich Low_complexity Low_complexity 1 40 0 2363 59 39 0 chr2 32790885 32791171 -220465412 - AluSp SINE Alu -12 301 5 28 29 0 0 chr2 32791283 32791318 -220465265 + AT_rich Low_complexity Low_complexity 1 35 0 27 49 0 0 chr2 32791784 32791825 -220464758 + AT_rich Low_complexity Low_complexity 1 41 0 1900 166 0 17 chr2 32792392 32792694 -220463889 - AluSx SINE Alu -15 297 1 1105 139 6 0 chr2 32792738 32792904 -220463679 + AluSg/x SINE Alu 124 290 -20 2362 76 20 10 chr2 32792906 32793210 -220463373 + AluSc SINE Alu 1 307 -2 24 0 0 0 chr2 32793213 32793237 -220463346 + AT_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr2 32793388 32793413 -220463170 + AT_rich Low_complexity Low_complexity 1 25 0 2003 159 0 0 chr2 32793456 32793758 -220462825 - AluSq SINE Alu -10 303 2 252 232 0 63 chr2 32794151 32794246 -220462337 + MER113 DNA MER1_type? 6 94 -427 347 274 145 8 chr2 32794514 32794638 -220461945 - MIR3 SINE MIR -8 200 60 507 168 88 18 chr2 32795942 32796055 -220460528 - FLAM_A SINE Alu 0 142 22 1144 256 78 44 chr2 32796313 32797045 -220459538 - HAL1 LINE L1 -379 2128 1372 2027 96 44 0 chr2 32797097 32797368 -220459215 - AluSq SINE Alu -30 283 1 2339 97 0 10 chr2 32797463 32797771 -220458812 - AluSx SINE Alu -7 305 1 727 308 60 39 chr2 32797771 32798203 -220458380 - HAL1 LINE L1 -1484 1023 583 2288 121 0 0 chr2 32798241 32798547 -220458036 - AluSx SINE Alu -4 308 3 816 148 0 23 chr2 32798590 32798718 -220457865 + FLAM_C SINE Alu 6 130 -13 5670 187 29 22 chr2 32798726 32798909 -220457674 + L1MC2 LINE L1 4199 4379 -1965 2404 82 0 0 chr2 32798909 32799201 -220457382 + AluSx SINE Alu 2 293 -19 5670 187 29 22 chr2 32799201 32801135 -220455448 + L1MC2 LINE L1 4379 6331 -13 2302 98 3 13 chr2 32801135 32801450 -220455133 - AluSp SINE Alu 0 313 2 411 292 105 50 chr2 32801541 32801718 -220454865 - HAL1 LINE L1 -1970 537 371 2258 55 0 34 chr2 32801718 32802032 -220454551 - AluY SINE Alu 0 304 1 411 292 105 50 chr2 32802032 32802357 -220454226 - HAL1 LINE L1 -2136 371 6 1862 161 9 25 chr2 32802397 32802713 -220453870 - AluJb SINE Alu -1 311 1 213 0 81 0 chr2 32803068 32803105 -220453478 + T-rich Low_complexity Low_complexity 1 40 0 1618 146 0 0 chr2 32803106 32803345 -220453238 - AluSx SINE Alu -73 239 1 2101 141 6 6 chr2 32803910 32804222 -220452361 - AluSx SINE Alu 0 312 1 2135 163 87 18 chr2 32804592 32805029 -220451554 - MLT1C LTR MaLR 0 467 1 846 140 7 29 chr2 32805180 32805316 -220451267 - FLAM_C SINE Alu 0 133 1 2025 139 3 3 chr2 32805644 32805938 -220450645 + AluJb SINE Alu 1 294 -18 1702 179 7 3 chr2 32805945 32806241 -220450342 + AluJo SINE Alu 5 301 -11 2348 102 0 0 chr2 32806364 32806667 -220449916 + AluSx SINE Alu 1 303 -9 370 310 99 107 chr2 32807052 32807436 -220449147 + L2 LINE L2 2886 3266 -6 345 270 71 40 chr2 32807441 32807567 -220449016 - MIR SINE MIR -95 167 38 2117 96 45 0 chr2 32807594 32807886 -220448697 - AluSc SINE Alu -4 305 1 2003 149 0 10 chr2 32808035 32808343 -220448240 + AluJb SINE Alu 1 305 -7 229 307 339 7 chr2 32808354 32808628 -220447955 - L3 LINE CR1 -160 1417 1053 1874 76 30 142 chr2 32808655 32808985 -220447598 + AluSp SINE Alu 2 294 -19 873 254 34 65 chr2 32809155 32809510 -220447073 - L1ME3A LINE L1 -2 6168 5825 200 299 15 0 chr2 32809731 32809798 -220446785 + L2 LINE L2 3173 3240 -73 1727 132 3 107 chr2 32809972 32810148 -220446435 - AluJb SINE Alu -10 292 164 1830 90 0 4 chr2 32810148 32810382 -220446201 + AluSg SINE Alu 1 233 -77 1727 132 3 107 chr2 32810382 32810531 -220446052 - AluJb SINE Alu -138 164 1 357 263 86 59 chr2 32810595 32810627 -220445956 + MIR3 SINE MIR 34 64 -144 2203 108 0 3 chr2 32810627 32810923 -220445660 - AluSx SINE Alu -17 295 1 357 263 86 59 chr2 32810923 32811042 -220445541 + MIR3 SINE MIR 64 189 -19 270 0 0 0 chr2 32811046 32811076 -220445507 + (TG)n Simple_repeat Simple_repeat 1 30 0 2360 54 0 0 chr2 32811076 32811356 -220445227 - AluY SINE Alu -31 280 1 686 133 0 0 chr2 32811598 32811696 -220444887 + AluSq SINE Alu 1 98 -214 1515 133 5 0 chr2 32811816 32812034 -220444549 + AluSq SINE Alu 94 312 -1 460 259 80 14 chr2 32813435 32813647 -220442936 - HAL1b LINE L1 -750 598 373 4156 149 41 37 chr2 32813682 32815192 -220441391 - L1PA16 LINE L1 -104 6062 4544 1512 226 0 41 chr2 32815192 32815473 -220441110 + L1 LINE L1 4136 4394 -1752 2389 82 0 16 chr2 32815473 32815790 -220440793 + AluSx SINE Alu 1 312 0 1512 226 0 41 chr2 32815790 32815945 -220440638 + L1 LINE L1 4394 4554 -1592 1599 137 29 4 chr2 32816321 32816562 -220440021 + AluSx SINE Alu 54 300 -12 613 156 74 25 chr2 32816568 32816690 -220439893 + AluJb SINE Alu 1 128 -184 42 0 0 0 chr2 32816696 32816738 -220439845 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr2 32816871 32816894 -220439689 + AT_rich Low_complexity Low_complexity 1 23 0 240 150 0 0 chr2 32817918 32817958 -220438625 - L1M4 LINE L1 -1584 4562 4523 * 1675 234 50 27 chr2 32817955 32818334 -220438249 + L1ME1 LINE L1 5551 5951 -215 2017 93 62 7 chr2 32818334 32818623 -220437960 - AluSc SINE Alu -4 305 1 1675 234 50 27 chr2 32818623 32818841 -220437742 + L1ME1 LINE L1 5951 6162 -4 1961 146 7 10 chr2 32818913 32819214 -220437369 + AluJo SINE Alu 3 302 -10 23 68 0 0 chr2 32819375 32819419 -220437164 + AT_rich Low_complexity Low_complexity 1 44 0 228 145 18 2 chr2 32819637 32819803 -220436780 + AluJb SINE Alu 86 290 -12 37 23 0 0 chr2 32819885 32819929 -220436654 + AT_rich Low_complexity Low_complexity 1 44 0 1990 128 17 10 chr2 32820531 32820820 -220435763 + AluSp SINE Alu 1 291 -22 1984 135 3 20 chr2 32821021 32821324 -220435259 - AluJb SINE Alu -14 298 1 294 167 0 0 chr2 32821326 32821374 -220435209 - MER58 DNA MER1_type -133 82 35 1654 173 0 33 chr2 32822204 32822510 -220434073 + AluJo SINE Alu 1 296 -16 2280 84 44 0 chr2 32822512 32822808 -220433775 + AluSg SINE Alu 1 309 -1 225 0 0 0 chr2 32823273 32823298 -220433285 + (T)n Simple_repeat Simple_repeat 1 25 0 1644 131 25 0 chr2 32823307 32823544 -220433039 - AluSx SINE Alu -69 243 1 2365 57 0 0 chr2 32823546 32823858 -220432725 - AluY SINE Alu 0 312 1 1570 176 4 11 chr2 32823858 32824136 -220432447 - AluJb SINE Alu -11 301 26 2247 100 0 17 chr2 32824317 32824455 -220432128 + AluSx SINE Alu 1 140 -172 2429 54 0 7 chr2 32824455 32824753 -220431830 + AluY SINE Alu 1 296 -15 2247 100 0 17 chr2 32824753 32824914 -220431669 + AluSx SINE Alu 140 295 -17 2078 100 3 41 chr2 32825006 32825325 -220431258 - AluSx SINE Alu -5 307 1 1894 152 52 6 chr2 32825471 32825800 -220430783 - MER2 DNA MER2_type 0 344 1 2190 84 0 75 chr2 32825986 32826318 -220430265 - AluSc SINE Alu -2 307 1 252 77 0 0 chr2 32826341 32826380 -220430203 + (TTTAA)n Simple_repeat Simple_repeat 3 41 0 1679 173 25 0 chr2 32826380 32826658 -220429925 - AluJo SINE Alu -27 285 1 2241 89 7 0 chr2 32826879 32827170 -220429413 - AluSp SINE Alu -20 293 1 269 196 59 0 chr2 32827262 32827313 -220429270 + MIR SINE MIR 188 241 -21 2255 102 0 7 chr2 32827555 32827860 -220428723 + AluSx SINE Alu 1 303 -9 1764 140 54 7 chr2 32828213 32828492 -220428091 + AluJb SINE Alu 1 292 -20 1959 153 0 3 chr2 32828682 32828976 -220427607 - AluJb SINE Alu -19 293 1 2299 77 34 3 chr2 32829246 32829543 -220427040 - AluSq SINE Alu -7 306 1 1691 116 0 0 chr2 32829722 32829946 -220426637 + AluSx SINE Alu 1 224 -88 334 183 161 11 chr2 32829948 32830041 -220426542 + L1ME4a LINE L1 6012 6118 -3 2508 61 7 0 chr2 32831968 32832264 -220424319 - AluSp SINE Alu -15 298 1 443 322 60 48 chr2 32833654 32833761 -220422822 + L1ME LINE L1 406 510 -5906 1304 184 53 70 chr2 32833761 32834060 -220422523 + AluJo SINE Alu 1 294 -18 443 322 60 48 chr2 32834060 32834415 -220422168 + L1ME LINE L1 510 874 -5542 2207 99 22 2 chr2 32834920 32835513 -220421070 + AluY SINE Alu 1 286 -25 772 258 111 37 chr2 32835513 32836109 -220420474 + L1ME LINE L1 1212 1851 -4756 734 153 91 34 chr2 32836110 32836286 -220420297 + AluJb SINE Alu 1 186 -126 262 300 44 0 chr2 32836312 32836402 -220420181 + L1ME LINE L1 1758 1851 -4575 690 284 79 17 chr2 32836475 32836891 -220419692 + L1ME LINE L1 1957 2398 -4209 773 143 31 62 chr2 32837002 32837163 -220419420 - FRAM SINE Alu -20 156 1 1139 214 46 0 chr2 32837197 32837435 -220419148 - MER68 LTR ERV1 -10 552 304 579 154 77 8 chr2 32837446 32837563 -220419020 - MER68 LTR ERV1 -411 151 27 1511 242 81 20 chr2 32837864 32837985 -220418598 + L1MC4 LINE L1 6515 6627 -1415 2148 124 0 0 chr2 32837985 32838276 -220418307 + AluSx SINE Alu 1 291 -21 1511 242 81 20 chr2 32838276 32838427 -220418156 + L1MC4 LINE L1 6627 6767 -1275 1906 193 22 5 chr2 32838427 32838795 -220417788 - MLT1A2 LTR MaLR 0 374 1 1511 242 81 20 chr2 32838795 32839063 -220417520 + L1MC4 LINE L1 6767 7089 -953 1077 151 0 6 chr2 32839115 32839281 -220417302 + AluSx SINE Alu 1 165 -147 483 216 8 72 chr2 32839314 32839381 -220417202 + MIR SINE MIR 142 212 -50 2214 102 31 0 chr2 32839381 32839675 -220416908 - AluSg SINE Alu -7 303 1 2013 110 68 0 chr2 32839675 32839955 -220416628 - AluSq SINE Alu -13 300 1 483 216 8 72 chr2 32839955 32840011 -220416572 + MIR SINE MIR 210 258 -4 767 167 0 0 chr2 32840012 32840138 -220416445 + FLAM_C SINE Alu 1 126 -7 2104 118 3 3 chr2 32840199 32840503 -220416080 - AluSg SINE Alu -1 309 6 1362 149 175 10 chr2 32840528 32840837 -220415746 + MER46B DNA MER2_type 1 235 -1 2378 62 3 0 chr2 32841140 32841432 -220415151 - AluSx SINE Alu -18 294 2 187 206 304 11 chr2 32841435 32841527 -220415056 + MIR SINE MIR 94 212 -50 223 360 87 27 chr2 32842852 32843002 -220413581 + L2 LINE L2 2682 2840 -474 2339 76 3 0 chr2 32843002 32843303 -220413280 - AluSp SINE Alu -11 302 1 22 0 0 0 chr2 32843311 32843333 -220413250 + AT_rich Low_complexity Low_complexity 1 22 0 407 333 58 0 chr2 32843836 32843974 -220412609 + L2 LINE L2 3115 3260 -12 37 0 0 0 chr2 32844249 32844286 -220412297 + AT_rich Low_complexity Low_complexity 1 37 0 48 32 0 0 chr2 32844340 32844402 -220412181 + AT_rich Low_complexity Low_complexity 1 62 0 244 333 80 35 chr2 32844659 32844860 -220411723 - L2 LINE L2 -404 2910 2701 304 215 0 15 chr2 32845041 32845106 -220411477 - L1MC4 LINE L1 -1338 6704 6641 1555 184 23 27 chr2 32845106 32845405 -220411178 - AluJb SINE Alu -14 298 1 1453 57 0 6 chr2 32845425 32845600 -220410983 + AluY SINE Alu 1 174 -137 1928 148 0 0 chr2 32846536 32846814 -220409769 - AluSx SINE Alu -21 291 14 648 250 230 5 chr2 32846931 32847127 -220409456 + MIR SINE MIR 20 259 -3 2511 80 0 3 chr2 32847609 32847922 -220408661 - AluSp SINE Alu -1 312 1 212 323 215 0 chr2 32848055 32848148 -220408435 + L2 LINE L2 3150 3262 -10 2298 284 107 38 chr2 32848191 32848308 -220408275 + L2 LINE L2 935 1042 -2272 797 188 0 0 chr2 32848308 32848441 -220408142 - FLAM_A SINE Alu 0 133 1 2298 284 107 38 chr2 32848441 32849276 -220407307 + L2 LINE L2 1042 1953 -1361 2041 112 31 3 chr2 32849304 32849590 -220406993 - AluSg SINE Alu -14 296 3 235 256 0 13 chr2 32849620 32849698 -220406885 - L1MC4 LINE L1 -64 7978 7902 23 68 0 0 chr2 32850259 32850303 -220406280 + AT_rich Low_complexity Low_complexity 1 44 0 798 154 0 0 chr2 32850304 32850421 -220406162 - FLAM_C SINE Alu -16 117 1 2397 89 0 0 chr2 32850477 32850780 -220405803 - AluSc SINE Alu -6 303 1 669 150 144 0 chr2 32851341 32851514 -220405069 + L1MB8 LINE L1 5774 5971 -207 2035 115 18 0 chr2 32851625 32851911 -220404672 + AluSq SINE Alu 4 294 -19 464 254 65 35 chr2 32852015 32852280 -220404303 + L1MC4a LINE L1 5254 5525 -596 2291 96 0 3 chr2 32852305 32852598 -220403985 + AluSg SINE Alu 1 292 -18 810 173 113 118 chr2 32852599 32852701 -220403882 - L1MB8 LINE L1 -10 6168 6067 2248 120 0 0 chr2 32852701 32853001 -220403582 - AluSx SINE Alu -12 300 1 810 173 113 118 chr2 32853001 32853244 -220403339 - L1MB8 LINE L1 -111 6067 5825 1765 130 93 4 chr2 32853248 32853517 -220403066 - AluSx SINE Alu -16 296 4 1645 133 18 75 chr2 32853526 32853579 -220403004 - L1MB8 LINE L1 -1094 5052 4998 1468 168 113 7 chr2 32853579 32853853 -220402730 - AluSg1 SINE Alu -2 307 5 1645 133 18 75 chr2 32853853 32853873 -220402710 - L1MB8 LINE L1 -1148 4998 4978 2605 53 0 0 chr2 32853873 32854175 -220402408 - AluY SINE Alu -9 302 1 1645 133 18 75 chr2 32854175 32854320 -220402263 - L1MB8 LINE L1 -1168 4978 4864 1963 152 3 16 chr2 32854320 32854630 -220401953 + AluSx SINE Alu 1 306 -6 1645 133 18 75 chr2 32854630 32854809 -220401774 - L1MB8 LINE L1 -1282 4864 4676 1230 218 15 23 chr2 32854826 32855088 -220401495 - AluJb SINE Alu -52 260 1 696 193 135 29 chr2 32855088 32855295 -220401288 + L1MC4a LINE L1 5511 5739 -2069 804 203 61 12 chr2 32855360 32855523 -220401060 - MER5A DNA MER1_type -6 183 13 332 216 0 11 chr2 32855595 32855683 -220400900 + L1MC4a LINE L1 5873 5959 -1849 25 18 0 73 chr2 32855831 32855886 -220400697 + AT_rich Low_complexity Low_complexity 1 51 0 778 204 7 0 chr2 32855905 32856047 -220400536 + FRAM SINE Alu 1 143 -33 1747 160 16 46 chr2 32856048 32856354 -220400229 + AluJo SINE Alu 1 297 -15 2113 122 0 13 chr2 32856357 32856661 -220399922 - AluSx SINE Alu -12 300 1 577 260 28 11 chr2 32857182 32857359 -220399224 - MER104 DNA Tc2 0 180 1 2028 123 3 7 chr2 32857513 32857806 -220398777 + AluSx SINE Alu 1 292 -20 1888 166 3 10 chr2 32857852 32858166 -220398417 - AluJo SINE Alu 0 312 1 2257 93 0 0 chr2 32858836 32859125 -220397458 + AluSg SINE Alu 1 289 -21 2228 104 0 23 chr2 32859328 32859635 -220396948 + AluSx SINE Alu 1 300 -12 32 43 0 0 chr2 32860046 32860092 -220396491 + AT_rich Low_complexity Low_complexity 1 46 0 2238 117 0 0 chr2 32860413 32860711 -220395872 + AluSx SINE Alu 1 298 -14 1528 176 60 14 chr2 32861017 32861301 -220395282 + AluJo SINE Alu 1 297 -15 2102 109 0 42 chr2 32861646 32861959 -220394624 - AluSx SINE Alu -10 302 3 1240 209 8 0 chr2 32861961 32862200 -220394383 - AluSg/x SINE Alu -6 306 66 2211 103 0 20 chr2 32862334 32862635 -220393948 + AluSx SINE Alu 1 295 -17 1736 162 10 3 chr2 32862654 32862956 -220393627 + AluSx SINE Alu 9 312 0 906 316 207 14 chr2 32863479 32864187 -220392396 + L2 LINE L2 2189 3031 -282 1846 138 65 0 chr2 32864342 32864618 -220391965 + AluSx SINE Alu 1 294 -18 594 258 116 18 chr2 32864661 32865205 -220391378 - L1ME2 LINE L1 -44 6120 5630 2199 131 0 16 chr2 32865205 32865519 -220391064 - AluSx SINE Alu -3 309 1 1656 163 37 10 chr2 32865519 32865819 -220390764 - AluJo SINE Alu -4 308 1 594 258 116 18 chr2 32865819 32866095 -220390488 - L1ME2 LINE L1 -534 5630 5382 2268 111 0 0 chr2 32866095 32866392 -220390191 + AluSx SINE Alu 1 297 -15 594 258 116 18 chr2 32866392 32866589 -220389994 - L1ME2 LINE L1 -782 5382 5206 1730 112 16 4 chr2 32866589 32866840 -220389743 - AluSx SINE Alu -58 254 1 594 258 116 18 chr2 32866840 32867115 -220389468 - L1ME2 LINE L1 -958 5206 4606 548 261 100 56 chr2 32867517 32867661 -220388922 + MIR SINE MIR 2 163 -99 775 139 0 36 chr2 32867661 32867798 -220388785 + FLAM_A SINE Alu 1 132 -1 548 261 100 56 chr2 32867798 32867902 -220388681 + MIR SINE MIR 163 261 -1 259 196 0 0 chr2 32867986 32868032 -220388551 - LTR51 LTR ERV1 -49 622 577 21 0 0 0 chr2 32868806 32868827 -220387756 + AT_rich Low_complexity Low_complexity 1 21 0 768 123 0 0 chr2 32869232 32869338 -220387245 + FLAM_C SINE Alu 24 129 -14 577 228 144 50 chr2 32870867 32871016 -220385567 - L1ME4a LINE L1 -70 6051 5918 1745 104 123 8 chr2 32871016 32871284 -220385299 - AluSg1 SINE Alu -10 299 1 577 228 144 50 chr2 32871284 32871599 -220384984 - L1ME4a LINE L1 -203 5918 5543 837 162 0 14 chr2 32871618 32871760 -220384823 - FLAM_C SINE Alu -3 140 1 733 200 0 0 chr2 32871822 32871947 -220384636 + FLAM_A SINE Alu 1 125 -8 2170 118 7 7 chr2 32871951 32872256 -220384327 + AluSq SINE Alu 1 305 -8 329 203 165 0 chr2 32872293 32872372 -220384211 - MIR SINE MIR -16 246 155 1043 198 19 0 chr2 32872422 32872634 -220383949 - MER46A DNA MER2_type -1 235 20 2258 93 3 0 chr2 32872698 32872989 -220383594 + AluSq SINE Alu 2 293 -20 22 0 0 0 chr2 32873170 32873192 -220383391 + AT_rich Low_complexity Low_complexity 1 22 0 195 301 65 24 chr2 32873801 32873924 -220382659 + MIR3 SINE MIR 35 162 -46 1953 102 0 0 chr2 32874511 32874756 -220381827 - AluSq SINE Alu -22 291 47 2301 166 50 38 chr2 32874798 32875321 -220381262 - L1MB3 LINE L1 -55 6128 5600 1818 79 54 4 chr2 32875335 32875614 -220380969 - L1MA3 LINE L1 0 6305 6013 21 0 0 0 chr2 32875730 32875751 -220380832 + AT_rich Low_complexity Low_complexity 1 21 0 1600 128 0 0 chr2 32875751 32875970 -220380613 + AluSx SINE Alu 1 219 -93 205 224 12 12 chr2 32875974 32876059 -220380524 + (TA)n Simple_repeat Simple_repeat 2 86 0 217 358 81 64 chr2 32876063 32876265 -220380318 + L2 LINE L2 2544 2755 -559 4517 22 41 0 chr2 32876265 32876781 -220379802 + SVA Other Other 863 1398 0 217 358 81 64 chr2 32876781 32876873 -220379710 + L2 LINE L2 2755 2844 -470 2059 77 52 7 chr2 32878250 32878549 -220378034 - AluY SINE Alu 0 311 1 33 0 0 23 chr2 32880701 32880730 -220375853 + AT_rich Low_complexity Low_complexity 1 30 -13 1841 176 7 3 chr2 32880730 32881032 -220375551 - AluJb SINE Alu -9 303 1 33 0 0 23 chr2 32881032 32881046 -220375537 + AT_rich Low_complexity Low_complexity 30 43 0 2271 85 3 7 chr2 32881058 32881351 -220375232 + AluSg SINE Alu 1 292 -18 2168 126 0 7 chr2 32881579 32881889 -220374694 - AluSx SINE Alu -4 308 1 2308 73 17 0 chr2 32882085 32882372 -220374211 + AluY SINE Alu 1 292 -19 2085 83 6 80 chr2 32883141 32883298 -220373285 - AluSc SINE Alu -20 289 122 2258 105 3 0 chr2 32883298 32883593 -220372990 - AluSg SINE Alu -14 296 1 2085 83 6 80 chr2 32883593 32883612 -220372971 - AluSc SINE Alu -187 122 103 2431 85 3 0 chr2 32883612 32883918 -220372665 - AluSg SINE Alu -3 307 1 2085 83 6 80 chr2 32883918 32884052 -220372531 - AluSc SINE Alu -206 103 1 2275 114 0 0 chr2 32884054 32884351 -220372232 - AluSx SINE Alu -15 297 1 24 0 0 0 chr2 32884359 32884383 -220372200 + AT_rich Low_complexity Low_complexity 1 24 0 832 128 0 0 chr2 32884383 32884500 -220372083 - FLAM_C SINE Alu -16 117 1 295 145 0 72 chr2 32884511 32884580 -220372003 - Alu SINE Alu -5 297 234 909 136 21 14 chr2 32884591 32884731 -220371852 - AluSq/x SINE Alu -171 141 1 550 172 0 0 chr2 32885641 32885734 -220370849 - FLAM SINE Alu -13 130 38 238 214 271 0 chr2 32886042 32886112 -220370471 - L1ME4a LINE L1 -47 6074 5986 2330 105 3 13 chr2 32886147 32886462 -220370121 + AluSx SINE Alu 1 312 0 268 223 106 21 chr2 32886462 32886556 -220370027 - L1ME4a LINE L1 -202 5919 5818 2239 145 31 41 chr2 32886758 32887173 -220369410 - LTR57 LTR ERVL 0 411 1 569 303 60 25 chr2 32887183 32887497 -220369086 - HAL1b LINE L1 -740 608 284 2311 108 0 6 chr2 32887519 32887833 -220368750 - AluSx SINE Alu 0 312 1 337 312 77 69 chr2 32887894 32888298 -220368285 - HAL1 LINE L1 -1222 1285 879 2143 119 13 16 chr2 32888497 32888807 -220367776 - AluSx SINE Alu -2 310 2 1799 152 13 23 chr2 32888808 32889111 -220367472 - AluJo SINE Alu -12 300 1 346 293 57 0 chr2 32889577 32889700 -220366883 - L1ME4a LINE L1 -295 5826 5697 1063 108 0 0 chr2 32889700 32889839 -220366744 - AluSg SINE Alu -4 308 170 690 100 0 0 chr2 32889839 32889964 -220366619 + ALR/Alpha Satellite centromeric 1 125 -65 1153 120 0 34 chr2 32889964 32890139 -220366444 - AluSg SINE Alu -141 169 1 382 279 29 0 chr2 32890139 32890279 -220366304 - L1ME4a LINE L1 -415 5706 5563 27 0 0 0 chr2 32890334 32890361 -220366222 + AT_rich Low_complexity Low_complexity 1 27 0 831 85 0 0 chr2 32890361 32890467 -220366116 - U6 snRNA snRNA -1 106 1 1989 157 0 6 chr2 32891086 32891399 -220365184 - AluJb SINE Alu -1 311 1 38 0 0 0 chr2 32891402 32891440 -220365143 + AT_rich Low_complexity Low_complexity 1 38 0 191 86 0 29 chr2 32891584 32891619 -220364964 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 1109 209 50 0 chr2 32891622 32891842 -220364741 - AluJo SINE Alu -24 288 58 2861 99 24 52 chr2 32891873 32892162 -220364421 - L1P4 LINE L1 -415 5751 5485 2172 100 7 0 chr2 32892162 32892483 -220364100 + AluSx SINE Alu 1 323 0 2861 99 24 52 chr2 32892483 32892765 -220363818 - L1P4 LINE L1 -681 5485 5197 1066 277 10 37 chr2 32892801 32893101 -220363482 - AluSq SINE Alu -10 293 2 3235 175 11 0 chr2 32893104 32893743 -220362840 - L1 LINE L1 -1125 5021 4376 1291 128 32 41 chr2 32893745 32893964 -220362619 - AluJb SINE Alu -11 301 85 1007 129 0 0 chr2 32894042 32894182 -220362401 + FLAM_C SINE Alu 1 140 -3 414 0 0 0 chr2 32894424 32894470 -220362113 + (TTTTG)n Simple_repeat Simple_repeat 5 50 0 2138 118 0 0 chr2 32894470 32894749 -220361834 - AluSx SINE Alu -32 280 2 236 250 0 12 chr2 32894936 32894966 -220361617 + CT-rich Low_complexity Low_complexity 2 31 -53 2020 95 0 11 chr2 32894966 32895229 -220361354 - AluSx SINE Alu -52 260 1 236 250 0 12 chr2 32895229 32895282 -220361301 + CT-rich Low_complexity Low_complexity 31 84 0 2268 113 0 3 chr2 32895328 32895629 -220360954 - AluSx SINE Alu -12 300 1 271 149 0 0 chr2 32897002 32897049 -220359534 - L1MC3 LINE L1 -159 7626 7580 2356 93 7 7 chr2 32897049 32897351 -220359232 - AluSg SINE Alu -8 302 1 357 271 97 84 chr2 32899248 32899403 -220357180 + MIR3 SINE MIR 16 172 -36 21 0 0 0 chr2 32900691 32900712 -220355871 + AT_rich Low_complexity Low_complexity 1 21 0 228 35 0 0 chr2 32901302 32901331 -220355252 + (TG)n Simple_repeat Simple_repeat 2 30 0 2358 93 10 0 chr2 32902483 32902784 -220353799 + AluSp SINE Alu 1 304 -9 885 229 182 39 chr2 32902784 32903217 -220353366 + MLT1J LTR MaLR 2 496 -15 373 252 81 0 chr2 32903918 32904041 -220352542 - L2 LINE L2 -1 3271 3139 594 266 153 62 chr2 32904120 32904602 -220351981 + HAL1 LINE L1 590 1115 -1392 1748 144 25 14 chr2 32904653 32904937 -220351646 - AluSx SINE Alu -11 301 15 1188 141 6 0 chr2 32905033 32905196 -220351387 + AluSx SINE Alu 1 164 -148 418 107 16 36 chr2 32905208 32905363 -220351220 + AluSp SINE Alu 145 268 -45 361 301 238 31 chr2 32905434 32906038 -220350545 - L2 LINE L2 -1059 2255 1527 504 133 0 0 chr2 32906274 32906349 -220350234 - AluS SINE Alu -236 76 2 1236 128 0 0 chr2 32906357 32906529 -220350054 - AluSg/x SINE Alu -12 300 129 2323 153 35 59 chr2 32906532 32907039 -220349544 - L1M4 LINE L1 -394 5784 5266 2368 93 0 7 chr2 32907039 32907340 -220349243 - AluSg SINE Alu -11 299 1 2323 153 35 59 chr2 32907340 32907433 -220349150 - L1M4 LINE L1 -912 5266 5197 1726 160 32 51 chr2 32907433 32907746 -220348837 - AluJb SINE Alu -5 307 1 2120 168 13 5 chr2 32907746 32908138 -220348445 - L1MC3 LINE L1 -202 7583 7189 317 169 15 0 chr2 32908134 32908199 -220348384 - L1M4 LINE L1 -3160 2986 2921 * 494 327 56 20 chr2 32908550 32908853 -220347730 - L2 LINE L2 -2263 1051 738 860 154 67 0 chr2 32908854 32909003 -220347580 + FRAM SINE Alu 1 155 -21 554 130 0 20 chr2 32909014 32909114 -220347469 + (GGAA)n Simple_repeat Simple_repeat 1 98 0 2363 205 12 48 chr2 32909119 32909191 -220347392 - L1M4 LINE L1 -3155 2991 2918 270 0 0 0 chr2 32909191 32909221 -220347362 + (TA)n Simple_repeat Simple_repeat 2 31 0 783 185 0 15 chr2 32909221 32909356 -220347227 - FLAM_C SINE Alu 0 133 1 2363 205 12 48 chr2 32909356 32909847 -220346736 - L1M4 LINE L1 -3226 2920 2447 617 137 8 76 chr2 32909860 32909964 -220346619 + L1MB3 LINE L1 6040 6135 -48 2192 103 13 16 chr2 32909964 32910275 -220346308 + AluY SINE Alu 1 310 -1 617 137 8 76 chr2 32910275 32910301 -220346282 + L1MB3 LINE L1 6135 6161 -22 1116 175 256 0 chr2 32910497 32910771 -220345812 + MLT1F1 LTR MaLR 224 567 0 21 0 0 0 chr2 32911143 32911164 -220345419 + AT_rich Low_complexity Low_complexity 1 21 0 306 210 194 32 chr2 32911571 32911823 -220344760 - L1MC5 LINE L1 -26 7935 7643 381 296 0 0 chr2 32912479 32912577 -220344006 + MIR3 SINE MIR 81 178 -30 691 212 32 41 chr2 32912698 32912956 -220343627 + L1MEc LINE L1 2163 2384 -3831 2058 123 0 0 chr2 32914863 32915140 -220341443 + AluSx SINE Alu 1 277 -35 198 0 0 0 chr2 32915146 32915168 -220341415 + (GAAAA)n Simple_repeat Simple_repeat 3 24 0 293 318 23 23 chr2 32915168 32915293 -220341290 + MIR SINE MIR 134 261 -1 270 303 165 32 chr2 32915316 32915534 -220341049 + MIR SINE MIR 16 262 0 328 318 19 0 chr2 32915638 32915745 -220340838 + MIR3 SINE MIR 88 196 -12 2173 134 0 0 chr2 32915836 32916143 -220340440 - AluSx SINE Alu -3 309 3 180 0 0 0 chr2 32916266 32916286 -220340297 + (A)n Simple_repeat Simple_repeat 1 20 0 2632 61 0 6 chr2 32917229 32917542 -220339041 - AluY SINE Alu 0 311 1 1821 221 24 101 chr2 32917549 32917920 -220338663 + L1MEc LINE L1 2908 3189 -3026 819 137 0 0 chr2 32917920 32918037 -220338546 - FLAM_C SINE Alu -16 117 1 1821 221 24 101 chr2 32918037 32918448 -220338135 + L1MEc LINE L1 3189 3630 -2585 1199 205 18 144 chr2 32918480 32918629 -220337954 + L1MEc LINE L1 3617 3783 -2432 1581 207 0 3 chr2 32918629 32918924 -220337659 + AluJo SINE Alu 1 294 -18 1199 205 18 144 chr2 32918924 32918993 -220337590 + L1MEc LINE L1 3783 3859 -2356 2208 110 0 3 chr2 32918993 32919292 -220337291 + AluSg SINE Alu 1 298 -12 1199 205 18 144 chr2 32919292 32919387 -220337196 + L1MEc LINE L1 3859 3964 -2251 2338 82 14 0 chr2 32919387 32919680 -220336903 + AluSg SINE Alu 4 300 -10 1199 205 18 144 chr2 32919680 32919834 -220336749 + L1MEc LINE L1 3964 4136 -2079 1913 154 0 0 chr2 32919834 32920119 -220336464 + AluJo SINE Alu 3 287 -25 1199 205 18 144 chr2 32920119 32920518 -220336065 + L1MEc LINE L1 4136 4324 -1891 737 181 8 0 chr2 32920561 32920688 -220335895 + FLAM_C SINE Alu 1 128 -5 532 153 0 18 chr2 32920688 32920799 -220335784 + GA-rich Low_complexity Low_complexity 1 109 0 269 211 0 0 chr2 32920816 32920868 -220335715 + AluSp SINE Alu 135 186 -117 2332 108 0 3 chr2 32920892 32921198 -220335385 + AluSx SINE Alu 1 305 -7 2916 94 48 0 chr2 32921200 32921634 -220334949 + L1MA2 LINE L1 5850 6304 0 210 226 161 21 chr2 32921643 32921736 -220334847 + MIR SINE MIR 157 262 0 2260 107 0 0 chr2 32921766 32922055 -220334528 + AluSx SINE Alu 1 289 -23 286 297 54 9 chr2 32922171 32922282 -220334301 + L3 LINE CR1 1409 1524 -53 1325 186 107 18 chr2 32922642 32922922 -220333661 - AluJo SINE Alu -7 305 1 2179 77 4 7 chr2 32923166 32923440 -220333143 - AluSp SINE Alu -2 311 39 38 39 0 0 chr2 32923440 32923492 -220333091 + AT_rich Low_complexity Low_complexity 1 52 0 201 211 0 0 chr2 32923498 32923550 -220333033 + (TA)n Simple_repeat Simple_repeat 2 53 0 1895 126 81 0 chr2 32923703 32924013 -220332570 + L1PB4 LINE L1 5818 6152 -4 1868 143 39 7 chr2 32924095 32924402 -220332181 + MER49 LTR ERV1 1 317 -606 694 150 4 22 chr2 32924402 32924660 -220331923 + AluJ SINE Alu 1 309 -3 1635 147 35 57 chr2 32924660 32924974 -220331609 + MER49 LTR ERV1 308 614 -309 515 120 49 6 chr2 32924981 32925121 -220331462 + MER30 DNA MER1_type 2 230 0 2160 87 23 26 chr2 32925121 32925430 -220331153 + MER49 LTR ERV1 607 914 -9 23 54 0 0 chr2 32927827 32927864 -220328719 + AT_rich Low_complexity Low_complexity 1 37 0 2590 41 0 0 chr2 32928601 32928893 -220327690 + AluY SINE Alu 1 292 -19 2288 97 0 0 chr2 32929022 32929312 -220327271 - AluSg SINE Alu -20 290 1 243 167 17 50 chr2 32929468 32929528 -220327055 + MIR SINE MIR 63 120 -142 2462 76 3 0 chr2 32929547 32929849 -220326734 + AluSp SINE Alu 1 303 -10 610 236 50 55 chr2 32929853 32930052 -220326531 + MER63A DNA MER1_type 8 205 -5 197 301 221 0 chr2 32930058 32930171 -220326412 + MIR SINE MIR 125 262 0 2385 102 3 0 chr2 32930478 32930782 -220325801 - AluSp SINE Alu -8 305 1 2490 79 3 0 chr2 32931105 32931410 -220325173 + AluSp SINE Alu 3 308 -5 2341 90 0 16 chr2 32931597 32931907 -220324676 + AluSc SINE Alu 1 305 -4 987 204 19 28 chr2 32932061 32932272 -220324311 + MER3 DNA MER1_type 1 209 0 289 327 35 40 chr2 32932774 32932976 -220323607 - MIR3 SINE MIR -5 203 3 2363 92 3 0 chr2 32933190 32933495 -220323088 + AluSx SINE Alu 1 306 -6 4121 116 49 80 chr2 32933592 32934401 -220322182 - LTR1 LTR ERV1 -1 784 1 1774 166 0 40 chr2 32934971 32935272 -220321311 - AluJb SINE Alu -23 289 1 1412 203 81 61 chr2 32935448 32935811 -220320772 - L1ME2 LINE L1 -13 6151 5776 2259 76 46 16 chr2 32935811 32936114 -220320469 + AluSx SINE Alu 1 312 0 1412 203 81 61 chr2 32936114 32936209 -220320374 - L1ME2 LINE L1 -388 5776 5684 1963 205 27 117 chr2 32936365 32936775 -220319808 + LTR9 LTR ERV1 37 482 -130 2344 66 0 3 chr2 32936775 32937061 -220319522 + AluY SINE Alu 1 285 -26 1963 205 27 117 chr2 32937061 32937181 -220319402 + LTR9 LTR ERV1 482 504 -108 2301 99 0 0 chr2 32937181 32937474 -220319109 - AluSc SINE Alu -16 293 1 1963 205 27 117 chr2 32937474 32937575 -220319008 + LTR9 LTR ERV1 503 612 0 2540 68 0 0 chr2 32937665 32937973 -220318610 + AluSc SINE Alu 1 308 -1 2102 139 0 3 chr2 32938357 32938659 -220317924 + AluSx SINE Alu 1 301 -11 33 0 0 0 chr2 32938781 32938814 -220317769 + AT_rich Low_complexity Low_complexity 1 33 0 463 136 0 0 chr2 32938814 32938880 -220317703 - AluS SINE Alu -246 66 1 290 299 110 0 chr2 32939099 32939226 -220317357 + MIR SINE MIR 48 188 -74 918 182 123 26 chr2 32939352 32939676 -220316907 + MLT1B LTR MaLR 1 503 -2 224 318 23 0 chr2 32939710 32939798 -220316785 + MIR SINE MIR 46 135 -73 246 317 10 29 chr2 32939882 32939986 -220316597 + MIR3 SINE MIR 101 202 -6 2432 74 3 3 chr2 32940018 32940317 -220316266 + AluSg SINE Alu 1 299 -11 2337 109 3 3 chr2 32941033 32941345 -220315238 - AluSx SINE Alu 0 312 1 354 254 48 63 chr2 32941966 32942110 -220314473 + L1ME4a LINE L1 5923 6066 -55 1755 160 3 21 chr2 32942110 32942460 -220314123 - AluSx SINE Alu 0 345 1 354 254 48 63 chr2 32942460 32942503 -220314080 + L1ME4a LINE L1 6066 6108 -13 1531 221 131 13 chr2 32942553 32943005 -220313578 + MLT1D LTR MaLR 1 505 0 1289 96 0 6 chr2 32943649 32943816 -220312767 - AluSg/x SINE Alu -9 303 138 2140 114 10 0 chr2 32943818 32944117 -220312466 - AluSq SINE Alu -11 302 1 32 26 0 0 chr2 32944191 32944230 -220312353 + AT_rich Low_complexity Low_complexity 1 39 0 421 169 35 12 chr2 32944234 32944406 -220312177 + (TA)n Simple_repeat Simple_repeat 1 176 0 292 313 47 16 chr2 32944510 32944638 -220311945 + L3 LINE CR1 1155 1286 -291 2119 136 0 3 chr2 32944726 32945020 -220311563 - AluSx SINE Alu -19 293 1 278 233 78 22 chr2 32945020 32945110 -220311473 + LTR67 LTR ERVL 10 104 -453 2192 116 0 10 chr2 32945437 32945740 -220310843 + AluSx SINE Alu 1 300 -12 1780 128 3 62 chr2 32945750 32946085 -220310498 + AluSx SINE Alu 1 317 0 1993 163 24 24 chr2 32946266 32946603 -220309980 + MER1B DNA MER1_type 1 337 0 1725 181 0 17 chr2 32946652 32946950 -220309633 - AluJo SINE Alu -19 293 1 301 200 105 9 chr2 32946958 32947063 -220309520 - L1ME4a LINE L1 -5 6116 6002 * 902 223 96 0 chr2 32947061 32947368 -220309215 - L1ME4a LINE L1 -702 5462 5136 207 0 0 0 chr2 32947379 32947402 -220309181 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 381 22 0 0 chr2 32947401 32947447 -220309136 + (GA)n Simple_repeat Simple_repeat 2 47 0 1645 101 22 9 chr2 32947464 32947692 -220308891 - AluSq SINE Alu -82 231 1 860 161 40 7 chr2 32947819 32947968 -220308615 + MLT1A1 LTR MaLR 1 154 -211 345 78 0 0 chr2 32947970 32948021 -220308562 + L1MA3 LINE L1 6255 6305 0 879 143 0 14 chr2 32948025 32948165 -220308418 + FRAM SINE Alu 33 170 -6 1224 137 64 5 chr2 32948165 32948369 -220308214 + MLT1A1 LTR MaLR 150 365 0 337 233 0 0 chr2 32948369 32948429 -220308154 - MLT1D LTR MaLR -445 60 1 228 182 91 0 chr2 32948434 32948489 -220308094 - L1 LINE L1 -2143 4003 3944 488 223 191 0 chr2 32948497 32948654 -220307929 - MIR SINE MIR -24 238 52 3547 142 82 60 chr2 32948753 32948894 -220307689 - L1MB8 LINE L1 0 6178 6042 1794 158 0 14 chr2 32948894 32949178 -220307405 + AluJb SINE Alu 13 292 -20 3547 142 82 60 chr2 32949178 32949782 -220306801 - L1MB8 LINE L1 -136 6042 5417 2302 100 3 0 chr2 32949819 32950119 -220306464 + AluSg SINE Alu 1 301 -9 851 308 184 13 chr2 32950120 32950771 -220305812 - L2 LINE L2 -137 3176 2397 1947 104 43 4 chr2 32950800 32951079 -220305504 + AluSg SINE Alu 7 296 -14 7852 75 2 1 chr2 32951446 32952414 -220304169 - LTR5 LTR ERVK 0 969 1 2196 89 0 3 chr2 32952457 32952764 -220303819 + AluSc SINE Alu 1 306 0 869 216 12 6 chr2 32952764 32952926 -220303657 + AluJo/FRAM SINE Alu 134 296 -16 238 255 286 10 chr2 32953205 32953303 -220303280 + MIR SINE MIR 16 140 -68 260 320 0 31 chr2 32953365 32953462 -220303121 - MIR3 SINE MIR -45 163 70 2310 31 38 17 chr2 32954845 32955136 -220301447 - AluY SINE Alu -14 297 1 2486 44 0 38 chr2 32955253 32955573 -220301010 - AluY SINE Alu -3 308 1 833 154 7 20 chr2 32955747 32955896 -220300687 - FRAM SINE Alu 0 40 1 1865 87 0 12 chr2 32956000 32956241 -220300342 - AluY SINE Alu -20 291 54 2517 37 3 13 chr2 32956248 32956546 -220300037 - AluY SINE Alu -16 295 1 284 191 111 0 chr2 32956546 32956609 -220299974 - AluJo SINE Alu -166 136 67 * 306 169 20 5 chr2 32956600 32956658 -220299925 - Alu SINE Alu -251 51 1 2110 138 0 3 chr2 32957102 32957406 -220299177 - AluJb SINE Alu -9 303 1 1903 150 10 23 chr2 32957473 32957780 -220298803 + AluSx SINE Alu 1 303 -9 831 206 12 18 chr2 32957786 32957951 -220298632 + AluJb SINE Alu 143 306 -6 698 228 0 0 chr2 32958014 32958141 -220298442 + FLAM_A SINE Alu 1 127 -6 476 288 32 50 chr2 32958231 32958293 -220298290 + MIR SINE MIR 47 109 -153 2300 92 0 3 chr2 32958293 32958596 -220297987 - AluSg SINE Alu -8 302 1 476 288 32 50 chr2 32958596 32958660 -220297923 + MIR SINE MIR 109 173 -89 2398 54 10 3 chr2 32958660 32958957 -220297626 + AluY SINE Alu 1 299 -12 476 288 32 50 chr2 32958957 32959048 -220297535 + MIR SINE MIR 173 261 -1 2223 96 0 23 chr2 32959586 32959888 -220296695 - AluSx SINE Alu -17 295 1 681 308 146 55 chr2 32959938 32960209 -220296374 - L2 LINE L2 0 3313 3068 2183 133 155 3 chr2 32960209 32960577 -220296006 + MSTA LTR MaLR 5 428 0 681 308 146 55 chr2 32960577 32961273 -220295310 - L2 LINE L2 -245 3068 2242 5018 181 113 47 chr2 32961306 32961514 -220295069 - Charlie6 DNA MER1_type -61 3439 3246 1722 112 0 0 chr2 32961514 32961746 -220294837 - AluSg/x SINE Alu -6 304 73 5018 181 113 47 chr2 32961746 32961988 -220294595 - Charlie6 DNA MER1_type -254 3246 3021 1187 169 52 24 chr2 32961988 32962236 -220294347 + L1MD2 LINE L1 6095 6349 -10 5018 181 113 47 chr2 32962236 32962418 -220294165 - Charlie6 DNA MER1_type -479 3021 2852 2079 93 43 0 chr2 32962418 32962696 -220293887 - AluSc SINE Alu -19 290 1 5018 181 113 47 chr2 32962696 32962827 -220293756 - Charlie6 DNA MER1_type -648 2852 2731 1880 155 21 0 chr2 32962827 32963117 -220293466 + AluSx SINE Alu 1 296 -16 5018 181 113 47 chr2 32963117 32963714 -220292869 - Charlie6 DNA MER1_type -769 2731 1986 2008 107 0 4 chr2 32964391 32964661 -220291922 + AluSx SINE Alu 1 269 -43 198 0 0 0 chr2 32964661 32964683 -220291900 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 986 167 19 0 chr2 32964683 32964845 -220291738 + AluSc SINE Alu 130 294 -15 213 222 175 16 chr2 32965092 32965155 -220291428 - MIR SINE MIR -78 130 58 220 329 121 7 chr2 32966085 32966225 -220290358 + MIR3 SINE MIR 49 204 -4 24 0 0 0 chr2 32966506 32966530 -220290053 + AT_rich Low_complexity Low_complexity 1 24 0 1958 129 0 32 chr2 32967117 32967426 -220289157 + AluSx SINE Alu 1 299 -13 256 264 28 0 chr2 32967426 32967498 -220289085 - HsTC2 DNA Tc2 0 1898 1825 379 310 102 43 chr2 32967510 32967765 -220288818 + L1MEd LINE L1 327 596 -5523 349 253 61 0 chr2 32967807 32967906 -220288677 - HsTC2 DNA Tc2 -1793 105 1 21 0 0 0 chr2 32968019 32968040 -220288543 + AT_rich Low_complexity Low_complexity 1 21 0 2372 84 0 10 chr2 32968445 32968753 -220287830 + AluSc SINE Alu 1 305 -4 269 0 0 53 chr2 32968902 32968940 -220287643 + (TTTTTA)n Simple_repeat Simple_repeat 4 39 0 5974 65 32 53 chr2 32968941 32970908 -220285675 - SVA Other Other -518 1383 70 240 35 0 0 chr2 32970908 32970937 -220285646 + (AGGGGG)n Simple_repeat Simple_repeat 6 34 0 1411 213 82 62 chr2 32971176 32971477 -220285106 - MLT1D LTR MaLR 0 505 193 2095 131 3 0 chr2 32971477 32971767 -220284816 - AluSq SINE Alu -22 291 1 1411 213 82 62 chr2 32971767 32971855 -220284728 - MLT1D LTR MaLR -312 193 108 2064 93 62 3 chr2 32972070 32972359 -220284224 + AluSx SINE Alu 1 306 -6 1985 217 50 35 chr2 32972383 32972984 -220283599 - L1MC4a LINE L1 -353 7455 6779 2169 110 13 0 chr2 32972984 32973285 -220283298 - AluSp SINE Alu -8 305 1 1985 217 50 35 chr2 32973285 32973350 -220283233 - L1MC4a LINE L1 -1029 6779 6716 889 119 0 0 chr2 32973350 32973468 -220283115 + FLAM_C SINE Alu 1 118 -25 180 97 0 0 chr2 32973518 32973549 -220283034 + (TAAA)n Simple_repeat Simple_repeat 1 31 0 436 204 44 53 chr2 32973553 32973666 -220282917 - L1MC4a LINE L1 -1105 6703 6600 1830 149 14 0 chr2 32974417 32974720 -220281863 - AluSx SINE Alu 0 309 3 2132 136 13 0 chr2 32974730 32975038 -220281545 - AluSx SINE Alu 0 312 1 1547 167 49 3 chr2 32975095 32975401 -220281182 - Charlie1 DNA MER1_type -162 2599 2280 1393 195 47 4 chr2 32975404 32975681 -220280902 + AluJb SINE Alu 1 289 -23 1868 109 12 62 chr2 32975702 32975850 -220280733 + AluSx SINE Alu 1 126 -186 2303 97 3 0 chr2 32975850 32976149 -220280434 + AluSp SINE Alu 2 301 -12 1868 109 12 62 chr2 32976149 32976320 -220280263 + AluSx SINE Alu 126 304 -8 284 344 67 20 chr2 32976591 32976801 -220279782 + MIR SINE MIR 34 252 -10 316 295 9 9 chr2 32976975 32977080 -220279503 - L2 LINE L2 -1035 2279 2175 1675 108 150 0 chr2 32977609 32977869 -220278714 - AluSx SINE Alu -13 299 1 2353 107 0 0 chr2 32977884 32978193 -220278390 - AluSg SINE Alu -1 309 1 484 243 115 46 chr2 32978783 32978950 -220277633 + MIR SINE MIR 28 215 -47 1649 161 33 15 chr2 32978950 32979224 -220277359 + AluJb SINE Alu 4 282 -30 484 243 115 46 chr2 32979224 32979274 -220277309 + MIR SINE MIR 215 260 -2 1430 158 98 8 chr2 32979290 32979556 -220277027 + AluJb SINE Alu 1 290 -22 1111 186 101 0 chr2 32980378 32980577 -220276006 + MER20 DNA MER1_type 1 219 0 22 70 0 0 chr2 32980829 32980872 -220275711 + AT_rich Low_complexity Low_complexity 1 43 0 217 281 9 119 chr2 32980979 32981166 -220275417 - MER5B DNA MER1_type -25 164 7 27 49 0 0 chr2 32981905 32981946 -220274637 + AT_rich Low_complexity Low_complexity 1 41 0 33 56 0 0 chr2 32982024 32982078 -220274505 + AT_rich Low_complexity Low_complexity 1 54 0 2259 87 10 13 chr2 32983510 32983819 -220272764 + AluSx SINE Alu 1 308 -4 22 0 0 0 chr2 32983900 32983922 -220272661 + AT_rich Low_complexity Low_complexity 1 22 0 2300 91 7 0 chr2 32983977 32984273 -220272310 - AluY SINE Alu -13 298 1 2208 106 3 0 chr2 32984296 32984615 -220271968 + AluSp SINE Alu 1 320 0 2399 52 42 0 chr2 32984626 32984915 -220271668 + AluY SINE Alu 1 301 -10 1131 172 63 14 chr2 32985075 32985296 -220271287 + MER46A DNA MER2_type 5 236 0 22 80 0 0 chr2 32985350 32985400 -220271183 + AT_rich Low_complexity Low_complexity 1 50 0 2259 108 3 3 chr2 32985546 32985853 -220270730 - AluSx SINE Alu -4 308 2 856 137 0 0 chr2 32986078 32986202 -220270381 + FLAM_C SINE Alu 1 124 -19 1064 196 8 106 chr2 32986266 32986476 -220270107 + MER8 DNA MER2_type 1 181 -58 1804 143 17 11 chr2 32986476 32986763 -220269820 + AluJb SINE Alu 17 305 -7 1064 196 8 106 chr2 32986763 32986817 -220269766 + MER8 DNA MER2_type 181 239 0 731 100 0 40 chr2 32986939 32987039 -220269544 + 7SLRNA srpRNA srpRNA 213 308 -12 2681 39 0 0 chr2 32988071 32988382 -220268201 + AluY SINE Alu 1 311 0 261 286 12 36 chr2 32988483 32988567 -220268016 - L2 LINE L2 -8 3264 3183 2397 55 3 0 chr2 32988575 32988864 -220267719 + AluY SINE Alu 1 290 -21 269 384 10 10 chr2 32989001 32989100 -220267483 - L2 LINE L2 -221 3051 2953 23 0 0 0 chr2 32989126 32989149 -220267434 + AT_rich Low_complexity Low_complexity 1 23 0 2047 125 7 0 chr2 32989241 32989530 -220267053 - AluSx SINE Alu -21 291 1 2142 101 35 0 chr2 32989571 32989858 -220266725 - AluSx SINE Alu -15 297 1 1217 217 83 10 chr2 32989892 32990206 -220266377 + L1ME3A LINE L1 5626 5962 -208 2315 94 3 0 chr2 32990256 32990555 -220266028 + AluSp SINE Alu 1 300 -13 192 224 165 47 chr2 32990565 32990650 -220265933 + MIR SINE MIR 168 262 0 814 307 78 58 chr2 32990797 32991296 -220265287 - MLT1J LTR MaLR 0 511 3 2295 66 31 0 chr2 32991332 32991621 -220264962 + AluY SINE Alu 1 298 -13 819 131 0 29 chr2 32991762 32991899 -220264684 + FLAM_C SINE Alu 1 133 0 238 234 172 8 chr2 32991926 32992054 -220264529 + L1ME3A LINE L1 5107 5255 -891 243 239 195 61 chr2 32992147 32992313 -220264270 + L1ME3A LINE L1 5314 5499 -722 2378 74 3 3 chr2 32992645 32992942 -220263641 - AluSc SINE Alu -12 297 1 2214 94 7 3 chr2 32993009 32993296 -220263287 + AluSc SINE Alu 1 288 -21 1162 180 182 95 chr2 32993423 32993444 -220263139 + L1ME3A LINE L1 5669 5687 -483 794 160 189 17 chr2 32993444 32993619 -220262964 + MER3 DNA MER1_type 1 205 -4 1162 180 182 95 chr2 32993619 32993766 -220262817 + L1ME3A LINE L1 5687 5820 -350 1914 135 14 14 chr2 32993766 32994062 -220262521 + AluJb SINE Alu 3 298 -14 1162 180 182 95 chr2 32994062 32994353 -220262230 + L1ME3A LINE L1 5820 6169 -1 1946 124 28 11 chr2 32994359 32994641 -220261942 + AluSx SINE Alu 1 287 -25 2405 89 3 3 chr2 32994870 32995183 -220261400 + AluSp SINE Alu 1 313 0 310 191 12 0 chr2 32995402 32995464 -220261119 - Alu SINE Alu -254 47 1 244 0 0 0 chr2 32995730 32995757 -220260826 + (TTTG)n Simple_repeat Simple_repeat 2 128 0 2286 48 26 0 chr2 32995757 32996031 -220260552 - AluY SINE Alu -31 280 1 1058 207 24 132 chr2 32996032 32996153 -220260430 + MLT2D LTR ERVL 1 133 -281 2105 49 20 15 chr2 32996153 32996461 -220260122 + AluY SINE Alu 1 282 -29 1058 207 24 132 chr2 32996461 32996802 -220259781 + MLT2D LTR ERVL 133 414 0 2020 118 0 20 chr2 32997017 32997321 -220259262 + AluSx SINE Alu 1 298 -14 626 227 164 13 chr2 32997323 32997548 -220259035 - L1ME LINE L1 -525 5641 5383 23 0 0 0 chr2 32997548 32997571 -220259012 + AT_rich Low_complexity Low_complexity 1 23 0 310 164 0 36 chr2 32997572 32997627 -220258956 - AluJo SINE Alu -13 289 237 441 72 0 72 chr2 32997638 32997707 -220258876 + LTR32 LTR ERVL 24 87 -384 1507 132 12 21 chr2 32997726 32997968 -220258615 + LTR32 LTR ERVL 232 471 0 1054 153 34 114 chr2 32997968 32998187 -220258396 - AluJo SINE Alu -71 241 45 2314 53 7 7 chr2 32998187 32998487 -220258096 + AluY SINE Alu 1 300 -11 1054 153 34 114 chr2 32998487 32998529 -220258054 - AluJo SINE Alu -267 45 1 2084 121 23 0 chr2 32998585 32998891 -220257692 + AluSq SINE Alu 1 313 0 1000 105 0 0 chr2 32998910 32999043 -220257540 + AluSq/x SINE Alu 1 133 -179 308 238 71 12 chr2 32999701 32999785 -220256798 + MIR SINE MIR 17 105 -157 23 33 0 0 chr2 32999813 32999843 -220256740 + AT_rich Low_complexity Low_complexity 1 30 0 218 189 85 142 chr2 32999862 32999920 -220256663 + MIR SINE MIR 104 155 -107 1990 131 0 13 chr2 32999920 33000054 -220256529 + AluSg SINE Alu 1 135 -175 1991 100 0 4 chr2 33000054 33000334 -220256249 + AluSq SINE Alu 35 313 0 1990 131 0 13 chr2 33000334 33000497 -220256086 + AluSg SINE Alu 135 294 -16 218 189 85 142 chr2 33000497 33000544 -220256039 + MIR SINE MIR 155 203 -59 931 177 151 137 chr2 33000571 33000943 -220255640 + L1MC4 LINE L1 6671 7047 -995 648 153 48 4 chr2 33001018 33001145 -220255438 + L1MC4 LINE L1 7646 8041 -1 215 284 0 15 chr2 33001145 33001212 -220255371 + MIR SINE MIR 197 262 0 2232 106 0 3 chr2 33001506 33001817 -220254766 - AluSx SINE Alu -2 310 1 820 136 42 131 chr2 33002110 33002148 -220254435 + MER20 DNA MER1_type 1 41 -178 2401 62 0 10 chr2 33002148 33002454 -220254129 - AluY SINE Alu -8 303 1 820 136 42 131 chr2 33002454 33002606 -220253977 + MER20 DNA MER1_type 41 174 -45 21 57 0 0 chr2 33002722 33002757 -220253826 + AT_rich Low_complexity Low_complexity 1 35 0 2068 114 3 3 chr2 33002782 33003080 -220253503 + AluSx SINE Alu 1 298 -14 330 128 0 0 chr2 33003233 33003280 -220253303 - AluSp SINE Alu -125 178 132 2192 88 3 3 chr2 33003287 33003581 -220253002 - AluSq SINE Alu -19 294 1 1437 113 21 125 chr2 33003600 33003936 -220252647 - AluSx SINE Alu -1 301 1 261 0 0 0 chr2 33004152 33004181 -220252402 + (TTTTG)n Simple_repeat Simple_repeat 1 29 0 1277 206 0 16 chr2 33004210 33004462 -220252121 - AluJo SINE Alu -64 248 1 1884 135 0 3 chr2 33004565 33004882 -220251701 - AluSg SINE Alu 0 316 1 331 248 25 83 chr2 33005042 33005199 -220251384 - HAL1b LINE L1 -492 856 709 2273 88 3 3 chr2 33005371 33005678 -220250905 + AluSp SINE Alu 1 307 -6 1939 125 7 0 chr2 33005683 33005982 -220250601 + AluSx SINE Alu 1 301 0 271 253 13 0 chr2 33006210 33006289 -220250294 - HAL1 LINE L1 -699 1808 1729 1796 133 4 4 chr2 33006498 33006769 -220249814 + AluSx SINE Alu 1 271 -41 2154 97 0 10 chr2 33006870 33007179 -220249404 + AluY SINE Alu 4 309 -2 311 227 36 26 chr2 33007487 33007608 -220248975 - LTR33A LTR ERVL 0 523 431 2352 70 3 3 chr2 33007652 33007964 -220248619 + AluSx SINE Alu 1 312 0 2200 89 14 0 chr2 33008576 33008867 -220247716 + AluSx SINE Alu 10 304 -8 327 309 55 0 chr2 33008868 33008978 -220247605 + L1MC4a LINE L1 5825 5940 -1868 1995 82 7 4 chr2 33008978 33009247 -220247336 + AluSp SINE Alu 1 270 -43 405 0 0 0 chr2 33009250 33009295 -220247288 + (CA)n Simple_repeat Simple_repeat 2 46 0 189 0 0 0 chr2 33009365 33009386 -220247197 + (TG)n Simple_repeat Simple_repeat 1 21 0 830 182 6 0 chr2 33009386 33009551 -220247032 - L1MD3 LINE L1 -10 7985 7820 248 226 94 0 chr2 33009549 33009602 -220246981 - L1MC4a LINE L1 -435 7373 7316 * 816 122 29 7 chr2 33009603 33009742 -220246841 - L1MC4a LINE L1 -1421 6387 6246 876 221 146 35 chr2 33009742 33009906 -220246677 - AluJo SINE Alu 0 313 168 2076 109 10 0 chr2 33009906 33010199 -220246384 + AluSg SINE Alu 1 296 -14 876 221 146 35 chr2 33010199 33010319 -220246264 - AluJo SINE Alu -145 168 1 245 188 0 75 chr2 33010324 33010404 -220246179 - L1MC4a LINE L1 -1572 6236 6163 322 39 59 0 chr2 33010411 33010462 -220246121 + T-rich Low_complexity Low_complexity 1 54 0 697 179 0 0 chr2 33010465 33010582 -220246001 - FLAM_C SINE Alu -16 117 1 2070 93 13 22 chr2 33010630 33010808 -220245775 + AluY SINE Alu 1 176 -135 306 0 0 0 chr2 33010808 33010842 -220245741 + (CGGGG)n Simple_repeat Simple_repeat 1 34 0 2070 93 13 22 chr2 33010842 33010976 -220245607 + AluY SINE Alu 176 310 -1 2328 88 0 0 chr2 33011068 33011375 -220245208 - AluSc SINE Alu -1 308 2 388 228 37 44 chr2 33011386 33011522 -220245061 + Charlie8 DNA MER1_type 72 206 -2211 253 266 109 120 chr2 33011730 33011914 -220244669 + MIR SINE MIR 3 184 -78 751 107 90 25 chr2 33011961 33012083 -220244500 + AluSq/x SINE Alu 2 131 -182 2226 105 0 0 chr2 33012085 33012389 -220244194 + AluSx SINE Alu 1 304 -8 2368 88 0 0 chr2 33012393 33012725 -220243858 + AluY SINE Alu 2 333 0 1964 138 0 6 chr2 33012728 33013040 -220243543 + AluSx SINE Alu 1 310 -2 561 236 0 0 chr2 33013047 33013157 -220243426 + MER96B DNA MER1_type? 307 416 -1 664 304 94 61 chr2 33013158 33013492 -220243091 + L2 LINE L2 2652 3011 -302 2032 120 17 3 chr2 33013492 33013792 -220242791 - AluSx SINE Alu -8 304 1 664 304 94 61 chr2 33013792 33014087 -220242496 + L2 LINE L2 3011 3295 -18 843 153 0 0 chr2 33014094 33014225 -220242358 + FLAM_C SINE Alu 1 131 -2 1926 137 0 13 chr2 33014568 33014867 -220241716 + AluSx SINE Alu 1 295 -17 308 222 22 44 chr2 33015110 33015200 -220241383 + MER5A DNA MER1_type 4 91 -98 278 319 7 64 chr2 33015297 33015438 -220241145 - MER5A DNA MER1_type 0 189 57 378 0 0 0 chr2 33015462 33015504 -220241079 + (TG)n Simple_repeat Simple_repeat 1 42 0 26 0 0 0 chr2 33015516 33015542 -220241041 + AT_rich Low_complexity Low_complexity 1 26 0 2221 86 7 0 chr2 33015623 33015915 -220240668 + AluY SINE Alu 1 294 -17 204 295 124 0 chr2 33016042 33016147 -220240436 + L2 LINE L2 3194 3311 -2 * 386 244 178 0 chr2 33016146 33016281 -220240302 - MIR SINE MIR -1 261 103 509 116 53 53 chr2 33016294 33016389 -220240194 + LTR47A LTR ERVL 1 95 -357 286 205 86 43 chr2 33016557 33016674 -220239909 - L1MC4 LINE L1 -5 8037 7916 2424 52 0 16 chr2 33016756 33017065 -220239518 - AluY SINE Alu -7 304 1 1132 71 0 0 chr2 33017066 33017206 -220239377 - AluSg SINE Alu -170 140 1 1748 122 7 21 chr2 33017337 33017616 -220238967 + AluSx SINE Alu 1 275 -37 1777 143 0 53 chr2 33017642 33017781 -220238802 + AluSx SINE Alu 1 146 -166 2104 75 7 14 chr2 33017781 33018086 -220238497 + AluSc SINE Alu 1 303 0 1777 143 0 53 chr2 33018086 33018266 -220238317 + AluSx SINE Alu 146 305 -7 2469 56 0 0 chr2 33018290 33018595 -220237988 + AluY SINE Alu 1 305 -6 29 0 0 0 chr2 33019024 33019053 -220237530 + AT_rich Low_complexity Low_complexity 1 29 0 2100 109 0 7 chr2 33019061 33019364 -220237219 + AluSc SINE Alu 1 301 -8 2266 95 0 0 chr2 33019366 33019670 -220236913 + AluSg SINE Alu 1 304 -6 2352 58 0 3 chr2 33019671 33019966 -220236617 + AluY SINE Alu 1 294 -17 3575 144 25 89 chr2 33019975 33020039 -220236544 - L1MB3 LINE L1 -7 6176 6109 1662 152 22 0 chr2 33020039 33020343 -220236240 + AluJo SINE Alu 1 310 0 4305 159 46 23 chr2 33020343 33020824 -220235759 - L1MC2 LINE L1 -12 6332 5864 212 0 0 35 chr2 33020824 33020853 -220235730 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 1957 87 0 8 chr2 33020855 33021119 -220235464 - AluSx SINE Alu -24 288 27 1778 150 3 7 chr2 33021119 33021410 -220235173 - AluJb SINE Alu -20 292 1 4305 159 46 23 chr2 33021410 33021796 -220234787 - L1MC2 LINE L1 -479 5865 5441 3575 144 25 89 chr2 33021796 33022440 -220234143 - L1MB3 LINE L1 -73 6110 5520 2164 117 3 0 chr2 33022440 33022749 -220233834 - AluSx SINE Alu -2 310 1 3575 144 25 89 chr2 33022749 33022838 -220233745 - L1MB3 LINE L1 -663 5520 5427 25 75 0 0 chr2 33023027 33023080 -220233503 + AT_rich Low_complexity Low_complexity 1 53 0 1499 134 6 113 chr2 33023127 33023333 -220233250 - AluJb SINE Alu -8 304 144 2130 91 7 26 chr2 33023333 33023640 -220232943 - AluSp SINE Alu -12 301 1 1499 134 6 113 chr2 33023640 33023762 -220232821 - AluJb SINE Alu -168 144 11 1066 53 0 0 chr2 33024167 33024299 -220232284 - AluY SINE Alu -179 132 1 2210 97 0 7 chr2 33024313 33024613 -220231970 - AluSg SINE Alu -12 298 1 192 125 0 0 chr2 33024614 33024646 -220231937 + (TCCC)n Simple_repeat Simple_repeat 4 35 0 2440 77 0 0 chr2 33024650 33024961 -220231622 - AluY SINE Alu 0 311 1 369 56 0 0 chr2 33024988 33025042 -220231541 - Alu SINE Alu 0 302 249 1806 157 20 0 chr2 33025378 33025672 -220230911 - AluJb SINE Alu -12 300 1 2245 83 0 16 chr2 33025696 33026010 -220230573 - AluY SINE Alu -2 309 1 694 108 0 0 chr2 33026113 33026206 -220230377 - AluS SINE Alu -219 93 1 1690 132 41 27 chr2 33026239 33026375 -220230208 + AluSx SINE Alu 1 134 -178 2084 78 7 14 chr2 33026375 33026698 -220229885 + AluSc SINE Alu 1 321 0 1690 132 41 27 chr2 33026698 33026913 -220229670 + AluSx SINE Alu 134 312 0 1771 128 43 0 chr2 33026960 33027242 -220229341 - AluSg SINE Alu -16 294 1 306 0 0 0 chr2 33027343 33027377 -220229206 + (TTA)n Simple_repeat Simple_repeat 2 35 0 1154 110 69 0 chr2 33027386 33027559 -220229024 - AluSg/x SINE Alu -24 286 102 973 134 0 0 chr2 33027582 33027724 -220228859 - AluSq/x SINE Alu -170 142 1 2287 77 0 3 chr2 33027743 33028041 -220228542 - AluY SINE Alu -14 297 1 2145 106 3 0 chr2 33028053 33028354 -220228229 - AluSx SINE Alu -10 302 1 263 333 0 77 chr2 33028464 33028581 -220228002 + MIR SINE MIR 17 124 -138 1900 133 0 17 chr2 33028582 33028749 -220227834 - AluSx SINE Alu -15 297 136 2155 99 7 3 chr2 33028749 33029052 -220227531 - AluSc SINE Alu -5 304 1 1900 133 0 17 chr2 33029052 33029186 -220227397 - AluSx SINE Alu -176 136 1 199 286 68 45 chr2 33029206 33029339 -220227244 - MIR SINE MIR -56 206 71 1954 126 70 3 chr2 33029382 33029683 -220226900 + MER31A LTR ERV1 1 321 -164 255 279 15 0 chr2 33029691 33029759 -220226824 + MER31-int LTR ERV1 103 171 -4765 970 165 6 0 chr2 33029773 33029937 -220226646 + FRAM SINE Alu 1 165 -11 2384 67 0 0 chr2 33029938 33030238 -220226345 + AluY SINE Alu 2 301 -10 310 91 146 0 chr2 33030266 33030321 -220226262 + MER31-int LTR ERV1 172 234 -4702 545 204 73 22 chr2 33030432 33030569 -220226014 + MER31-int LTR ERV1 611 754 -4182 351 171 23 57 chr2 33030596 33030684 -220225899 + MER31-int LTR ERV1 881 965 -3971 1482 102 0 9 chr2 33030689 33030914 -220225669 - AluSg/x SINE Alu -7 305 83 307 134 0 36 chr2 33030914 33030971 -220225612 - Alu SINE Alu -263 38 1 1424 172 35 97 chr2 33030971 33031194 -220225389 + MER31-int LTR ERV1 3683 3875 -1061 2088 99 0 50 chr2 33031194 33031516 -220225067 + AluSg1 SINE Alu 1 306 -3 1424 172 35 97 chr2 33031516 33031664 -220224919 + MER31-int LTR ERV1 3875 4031 -905 264 245 64 43 chr2 33031746 33031840 -220224743 - MIR SINE MIR -10 252 157 303 114 171 29 chr2 33031904 33031974 -220224609 + L1MD2 LINE L1 6070 6149 -210 495 220 0 0 chr2 33031976 33032076 -220224507 + L1MD2 LINE L1 6204 6303 -56 521 188 0 36 chr2 33032076 33032188 -220224395 - L1MC3 LINE L1 -348 7437 7330 21 0 0 0 chr2 33032866 33032887 -220223696 + GC_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr2 33033152 33033179 -220223404 + GC_rich Low_complexity Low_complexity 1 27 0 249 0 40 80 chr2 33033888 33033938 -220222645 + (TGGGGG)n Simple_repeat Simple_repeat 6 53 0 21 36 0 0 chr2 33035578 33035606 -220220977 + AT_rich Low_complexity Low_complexity 1 28 0 798 165 0 0 chr2 33035610 33035731 -220220852 - FLAM_C SINE Alu -21 122 2 192 77 0 0 chr2 33036749 33036775 -220219808 + (TG)n Simple_repeat Simple_repeat 2 27 0 1808 138 6 44 chr2 33036780 33037098 -220219485 - AluSx SINE Alu -6 306 1 4991 136 56 32 chr2 33037216 33038177 -220218406 - L1MC1 LINE L1 -2 6331 5348 2218 89 0 10 chr2 33038178 33038481 -220218102 - AluY SINE Alu -11 300 1 201 261 15 62 chr2 33038579 33038644 -220217939 + MIR SINE MIR 3 64 -198 25 0 0 0 chr2 33038648 33038673 -220217910 + AT_rich Low_complexity Low_complexity 1 25 0 460 237 158 13 chr2 33038728 33038880 -220217703 + MIR SINE MIR 88 261 -1 1734 154 34 3 chr2 33038912 33039210 -220217373 + AluJb SINE Alu 1 307 -5 422 231 121 51 chr2 33039492 33039711 -220216872 + MIR SINE MIR 17 256 -6 207 0 0 0 chr2 33040107 33040130 -220216453 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 1880 89 60 11 chr2 33040135 33040404 -220216179 - AluSg SINE Alu -28 282 1 502 251 326 0 chr2 33041014 33041189 -220215394 + MIR SINE MIR 21 252 -10 2173 79 17 3 chr2 33041191 33041482 -220215101 - AluSg SINE Alu -15 295 1 1788 144 48 0 chr2 33041710 33041731 -220214852 - AluSx SINE Alu -6 306 287 264 30 0 0 chr2 33041731 33041764 -220214819 + (TTTAA)n Simple_repeat Simple_repeat 3 35 0 1788 144 48 0 chr2 33041764 33042034 -220214549 - AluSx SINE Alu -25 287 1 684 257 28 56 chr2 33042095 33042344 -220214239 - HAL1 LINE L1 -2265 242 1 1586 130 8 0 chr2 33042584 33042830 -220213753 + AluJo SINE Alu 21 268 -44 1997 128 3 6 chr2 33043043 33043355 -220213228 + AluSp SINE Alu 1 311 -2 1666 138 22 4 chr2 33043403 33043678 -220212905 + AluSg SINE Alu 1 280 -30 505 207 56 101 chr2 33043930 33044109 -220212474 - MER5B DNA MER1_type 0 178 8 1918 129 0 4 chr2 33044122 33044401 -220212182 + AluSg SINE Alu 1 278 -32 230 0 33 0 chr2 33044410 33044440 -220212143 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1842 146 0 0 chr2 33044529 33044810 -220211773 - AluSx SINE Alu -26 286 6 345 282 122 19 chr2 33044840 33044996 -220211587 - L2 LINE L2 -171 3142 2971 2192 101 0 0 chr2 33045292 33045590 -220210993 - AluSx SINE Alu -13 299 2 832 148 0 0 chr2 33045688 33045810 -220210773 + FLAM_A SINE Alu 16 137 -5 429 270 0 0 chr2 33045810 33045899 -220210684 + L1MC4 LINE L1 6615 6703 -1339 191 35 0 35 chr2 33045925 33045954 -220210629 + (CA)n Simple_repeat Simple_repeat 2 29 0 446 101 0 0 chr2 33046569 33046638 -220209945 - L1MA1 LINE L1 -4 6298 6230 1642 117 0 13 chr2 33046878 33047109 -220209474 + AluJb SINE Alu 85 312 0 286 233 128 0 chr2 33047152 33047238 -220209345 - L1ME4a LINE L1 -63 6058 5962 1958 123 3 30 chr2 33047246 33047546 -220209037 - AluSx SINE Alu -20 292 1 2157 120 3 3 chr2 33047658 33047967 -220208616 - AluSx SINE Alu -1 311 3 26 30 0 0 chr2 33047991 33048024 -220208559 + AT_rich Low_complexity Low_complexity 1 33 0 2202 231 21 26 chr2 33048064 33048425 -220208158 - L1ME1 LINE L1 -72 6094 5736 1684 189 50 3 chr2 33048425 33048722 -220207861 + AluJb SINE Alu 1 311 -1 2202 231 21 26 chr2 33048722 33048976 -220207607 - L1ME1 LINE L1 -430 5736 5482 1350 225 35 65 chr2 33048979 33049442 -220207141 + L1MB1 LINE L1 4541 4989 -1157 * 2162 206 123 22 chr2 33049439 33050064 -220206519 + L1MB1 LINE L1 5481 6168 0 352 227 31 0 chr2 33050080 33050177 -220206406 - L1ME1 LINE L1 -1286 4860 4761 1204 151 46 50 chr2 33050219 33050329 -220206254 - AluJo SINE Alu -69 243 134 2662 30 0 7 chr2 33050329 33050634 -220205949 - AluY SINE Alu -7 304 2 1204 151 46 50 chr2 33050634 33050761 -220205822 - AluJo SINE Alu -178 134 7 610 226 106 22 chr2 33050771 33051046 -220205537 - L1ME1 LINE L1 -1538 4608 4311 673 212 45 6 chr2 33051060 33051239 -220205344 - L1ME1 LINE L1 -1932 4214 4029 510 152 179 9 chr2 33051243 33051355 -220205228 + FLAM_A SINE Alu 1 131 -2 550 104 0 0 chr2 33051373 33051450 -220205133 - Alu SINE Alu -233 77 1 423 159 0 0 chr2 33051450 33051519 -220205064 + Tigger2 DNA MER2_type 678 746 -1972 3102 152 66 23 chr2 33051622 33051767 -220204816 - Tigger2 DNA MER2_type -2025 693 556 2346 85 0 3 chr2 33051767 33052073 -220204510 + AluY SINE Alu 1 305 -6 3102 152 66 23 chr2 33052073 33052591 -220203992 - Tigger2 DNA MER2_type -2162 556 1 891 122 76 133 chr2 33052592 33052855 -220203728 - MER44D DNA MER2_type -91 518 1 841 226 55 60 chr2 33052933 33053077 -220203506 - L1MC4 LINE L1 -1 8041 7898 333 0 0 0 chr2 33053077 33053114 -220203469 + (TG)n Simple_repeat Simple_repeat 2 38 0 841 226 55 60 chr2 33053114 33053384 -220203199 - L1MC4 LINE L1 -144 7898 7629 351 140 0 0 chr2 33054192 33054249 -220202334 - MLT1J LTR MaLR -345 166 110 21 0 0 0 chr2 33054267 33054288 -220202295 + AT_rich Low_complexity Low_complexity 1 21 0 2286 104 3 0 chr2 33054322 33054620 -220201963 - AluSx SINE Alu -13 299 1 234 371 10 0 chr2 33055401 33055498 -220201085 - L3 LINE CR1 -384 1193 1096 360 293 71 20 chr2 33055564 33055762 -220200821 - L3 LINE CR1 -631 946 739 27 0 0 0 chr2 33055988 33056015 -220200568 + AT_rich Low_complexity Low_complexity 1 27 0 1978 110 10 13 chr2 33056310 33056609 -220199974 + AluSx SINE Alu 1 298 -14 2230 108 3 3 chr2 33057096 33057403 -220199180 - AluSp SINE Alu -6 307 1 2220 129 0 0 chr2 33057404 33057707 -220198876 - AluSg SINE Alu -7 303 1 225 279 34 20 chr2 33057707 33057854 -220198729 - L1MC/D LINE L1 -1919 5889 5741 1127 275 215 14 chr2 33057861 33058502 -220198081 - LTR50 LTR ERVL -25 770 1 2102 135 0 0 chr2 33058589 33058885 -220197698 - AluSg SINE Alu -14 296 1 22 0 0 0 chr2 33058895 33058917 -220197666 + AT_rich Low_complexity Low_complexity 1 22 0 2046 98 7 0 chr2 33058917 33059193 -220197390 - AluSg SINE Alu -19 291 14 939 289 47 26 chr2 33059272 33059398 -220197185 - ERVL LTR ERVL -440 5324 5202 2122 108 20 3 chr2 33059398 33059695 -220196888 - AluSx SINE Alu -10 302 1 939 289 47 26 chr2 33059695 33059994 -220196589 - ERVL LTR ERVL -562 5202 4890 3405 300 84 31 chr2 33060055 33062308 -220194275 - ERVL LTR ERVL -1002 4762 2293 1467 220 20 10 chr2 33062308 33062604 -220193979 - AluJo SINE Alu -13 299 1 3405 300 84 31 chr2 33062604 33063260 -220193323 - ERVL LTR ERVL -3471 2293 1674 1163 116 62 58 chr2 33063784 33063968 -220192615 - L1MA7 LINE L1 -6 6285 6098 2147 94 24 10 chr2 33063968 33064265 -220192318 + AluSg SINE Alu 1 301 -9 1163 116 62 58 chr2 33064265 33064321 -220192262 - L1MA7 LINE L1 -193 6098 6044 334 128 0 0 chr2 33064323 33064370 -220192213 - Alu SINE Alu -254 47 1 439 118 0 0 chr2 33064377 33064445 -220192138 - L1P5 LINE L1 -376 5780 5713 21 0 0 0 chr2 33064445 33064466 -220192117 + AT_rich Low_complexity Low_complexity 1 21 0 23 68 0 0 chr2 33065104 33065148 -220191435 + AT_rich Low_complexity Low_complexity 1 44 0 2079 116 0 60 chr2 33065560 33065727 -220190856 - AluSq SINE Alu -13 300 125 2174 108 10 3 chr2 33065727 33066023 -220190560 - AluSp SINE Alu -15 298 1 2328 98 0 0 chr2 33066026 33066332 -220190251 - AluY SINE Alu -4 307 2 2079 116 0 60 chr2 33066332 33066479 -220190104 - AluSq SINE Alu -190 123 1 1793 110 0 8 chr2 33068156 33068402 -220188181 - AluSx SINE Alu -51 261 18 1482 167 9 66 chr2 33068486 33068804 -220187779 - AluJb SINE Alu -12 300 1 1532 193 10 42 chr2 33069373 33069684 -220186899 - AluJo SINE Alu -11 301 1 207 0 0 0 chr2 33069810 33069833 -220186750 + (TA)n Simple_repeat Simple_repeat 1 23 0 1436 188 58 18 chr2 33070418 33070694 -220185889 + AluJo SINE Alu 6 292 -20 207 171 0 0 chr2 33070720 33070733 -220185850 + (CAA)n Simple_repeat Simple_repeat 2 14 -28 2167 83 3 10 chr2 33070733 33071021 -220185562 + AluY SINE Alu 1 286 -25 207 171 0 0 chr2 33071021 33071048 -220185535 + (CAA)n Simple_repeat Simple_repeat 13 42 0 422 269 60 15 chr2 33071973 33072107 -220184476 - MIR SINE MIR -1 261 122 306 270 235 0 chr2 33072122 33072237 -220184346 - MIR SINE MIR -74 188 47 1743 116 9 78 chr2 33072409 33072592 -220183991 - MER44D DNA MER2_type -1882 609 415 2212 94 0 13 chr2 33072592 33072891 -220183692 - AluSx SINE Alu -17 295 1 1743 116 9 78 chr2 33072891 33073052 -220183531 - MER44D DNA MER2_type -2076 415 19 2279 99 0 3 chr2 33073052 33073345 -220183238 + AluSq SINE Alu 1 292 -21 270 0 0 0 chr2 33073438 33073468 -220183115 + (TG)n Simple_repeat Simple_repeat 1 30 0 225 116 0 0 chr2 33073468 33073511 -220183072 - LTR66 LTR ERVL -174 436 394 267 239 0 0 chr2 33073515 33073582 -220183001 + (CATATA)n Simple_repeat Simple_repeat 6 72 0 250 354 72 9 chr2 33074014 33074237 -220182346 + L1ME LINE L1 5588 5824 -342 24 0 0 0 chr2 33074392 33074416 -220182167 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 33074602 33074623 -220181960 + AT_rich Low_complexity Low_complexity 1 21 0 1986 138 0 0 chr2 33074939 33075249 -220181334 - AluSx SINE Alu 0 310 1 914 214 6 0 chr2 33075251 33075419 -220181164 - FAM SINE Alu -6 169 1 35 0 0 0 chr2 33075620 33075655 -220180928 + AT_rich Low_complexity Low_complexity 1 35 0 1877 149 3 23 chr2 33075655 33075957 -220180626 - AluJo SINE Alu -16 296 1 2387 87 0 0 chr2 33076200 33076500 -220180083 - AluSg SINE Alu -10 300 1 2063 123 3 7 chr2 33079792 33080092 -220176491 - AluSx SINE Alu -13 299 1 305 222 69 0 chr2 33080101 33080173 -220176410 - L1MB8 LINE L1 0 6178 6102 1965 133 20 0 chr2 33080183 33080477 -220176106 - AluSx SINE Alu -12 300 1 1700 152 69 4 chr2 33080545 33080822 -220175761 - AluJb SINE Alu -14 298 4 584 121 0 0 chr2 33081388 33081471 -220175112 + AluY SINE Alu 1 83 -228 1775 155 0 24 chr2 33081973 33082269 -220174314 + AluJb SINE Alu 1 289 -23 2321 92 10 7 chr2 33083027 33083331 -220173252 + AluSq SINE Alu 1 305 -8 2359 112 0 0 chr2 33083819 33084131 -220172452 - AluSx SINE Alu 0 312 1 780 118 39 0 chr2 33084146 33084273 -220172310 - AluSq/x SINE Alu -180 132 1 2258 102 13 3 chr2 33085014 33085319 -220171264 - AluSx SINE Alu -4 308 1 467 107 0 0 chr2 33086114 33086189 -220170394 + AluJ/FRAM SINE Alu 233 307 -5 2459 57 0 0 chr2 33086565 33086863 -220169720 - AluY SINE Alu -13 298 1 2171 98 7 3 chr2 33086907 33087202 -220169381 - AluSq SINE Alu -17 296 1 21 0 0 0 chr2 33087260 33087281 -220169302 + AT_rich Low_complexity Low_complexity 1 21 0 216 188 0 0 chr2 33087281 33087329 -220169254 + T-rich Low_complexity Low_complexity 1 48 0 1885 143 3 7 chr2 33087348 33087642 -220168941 - AluSx SINE Alu -19 293 1 693 207 0 37 chr2 33087812 33087947 -220168636 - FLAM_A SINE Alu -3 130 1 2170 132 0 3 chr2 33088080 33088391 -220168192 + AluSg SINE Alu 1 310 0 24 53 0 0 chr2 33088758 33088796 -220167787 + AT_rich Low_complexity Low_complexity 1 38 0 1843 141 10 33 chr2 33088874 33089040 -220167543 - AluSq SINE Alu -15 298 141 2306 106 3 0 chr2 33089040 33089343 -220167240 - AluSp SINE Alu -9 304 1 1843 141 10 33 chr2 33089343 33089481 -220167102 - AluSq SINE Alu -172 141 1 192 77 0 0 chr2 33089561 33089587 -220166996 + (A)n Simple_repeat Simple_repeat 1 26 0 1389 142 55 90 chr2 33089593 33089873 -220166710 + MER2 DNA MER2_type 13 280 -65 2043 119 51 0 chr2 33089873 33090167 -220166416 + AluSp SINE Alu 1 309 -4 1389 142 55 90 chr2 33090167 33090231 -220166352 + MER2 DNA MER2_type 280 345 0 2068 127 0 0 chr2 33090248 33090558 -220166025 + AluSx SINE Alu 1 310 0 309 293 108 19 chr2 33092295 33092452 -220164131 + MIR SINE MIR 56 226 -36 191 111 0 28 chr2 33092607 33092643 -220163940 + (TTTTC)n Simple_repeat Simple_repeat 1 35 0 224 321 0 0 chr2 33092643 33092696 -220163887 + C-rich Low_complexity Low_complexity 2 54 0 2188 116 3 3 chr2 33092697 33093000 -220163583 - AluSq SINE Alu -10 303 1 1694 163 13 46 chr2 33093000 33093307 -220163276 - AluJb SINE Alu -15 297 1 2036 154 3 0 chr2 33093636 33093941 -220162642 - AluSx SINE Alu -4 308 3 742 245 78 5 chr2 33094128 33094332 -220162251 - MIR SINE MIR -13 249 31 1187 158 0 0 chr2 33094651 33094834 -220161749 + AluSg/x SINE Alu 121 303 -7 4032 227 75 48 chr2 33095744 33096371 -220160212 - L1MEc LINE L1 -2168 4476 3867 2085 151 7 0 chr2 33096371 33096675 -220159908 - AluSx SINE Alu -6 306 1 4032 227 75 48 chr2 33096675 33096961 -220159622 - L1MEc LINE L1 -2777 3867 3590 2256 101 10 0 chr2 33096961 33097267 -220159316 - AluSc SINE Alu 0 309 1 4032 227 75 48 chr2 33097267 33098281 -220158302 - L1MEc LINE L1 -3054 3590 2532 548 291 67 21 chr2 33098525 33098805 -220157778 - L1ME3A LINE L1 -218 5952 5653 1861 111 42 17 chr2 33098805 33099093 -220157490 - AluSx SINE Alu -17 295 1 548 291 67 21 chr2 33099093 33099139 -220157444 - L1ME3A LINE L1 -517 5653 5611 1517 185 73 17 chr2 33099164 33099521 -220157062 - L1MB4 LINE L1 -12 6168 5792 2558 205 84 29 chr2 33099538 33100226 -220156357 + MER44D DNA MER2_type 8 605 0 2312 164 49 36 chr2 33100234 33100382 -220156201 - L1MB4 LINE L1 -433 5747 5602 2031 116 7 0 chr2 33100382 33100676 -220155907 - AluSq SINE Alu -17 296 1 2312 164 49 36 chr2 33100676 33101141 -220155442 - L1MB4 LINE L1 -578 5602 5127 831 244 20 34 chr2 33101130 33101425 -220155158 - L1MEc LINE L1 -5252 1290 1000 * 356 249 165 74 chr2 33101686 33101983 -220154600 - L1MEc LINE L1 -6028 618 295 833 260 89 46 chr2 33102144 33102184 -220154399 - L1M4c LINE L1 -4468 2670 2633 2365 92 0 3 chr2 33102184 33102487 -220154096 + AluSx SINE Alu 1 302 -10 833 260 89 46 chr2 33102487 33103132 -220153451 - L1M4c LINE L1 -4505 2633 1877 2228 77 0 11 chr2 33103138 33103449 -220153134 - AluSq SINE Alu 0 308 1 413 266 114 29 chr2 33103449 33103603 -220152980 - L1M4c LINE L1 -5248 1611 1471 180 0 0 0 chr2 33103603 33103623 -220152960 + (TG)n Simple_repeat Simple_repeat 2 21 0 413 266 114 29 chr2 33103623 33103764 -220152819 - L1M4c LINE L1 -5388 1471 1286 426 250 62 8 chr2 33104665 33104793 -220151790 + MIR SINE MIR 127 261 -1 23 33 0 0 chr2 33105164 33105194 -220151389 + AT_rich Low_complexity Low_complexity 1 30 0 29 28 0 0 chr2 33106041 33106077 -220150506 + AT_rich Low_complexity Low_complexity 1 36 0 195 42 0 0 chr2 33106666 33106690 -220149893 + (T)n Simple_repeat Simple_repeat 1 24 0 2377 106 0 0 chr2 33107047 33107359 -220149224 - AluSx SINE Alu 0 312 1 1339 287 155 26 chr2 33107655 33107998 -220148585 - L2 LINE L2 -102 3211 2914 2012 133 3 7 chr2 33107998 33108291 -220148292 + AluSx SINE Alu 2 293 -19 1339 287 155 26 chr2 33108291 33108338 -220148245 - L2 LINE L2 -399 2914 2874 1841 185 0 10 chr2 33108338 33108641 -220147942 + AluJb SINE Alu 1 300 -12 1339 287 155 26 chr2 33108641 33109143 -220147440 - L2 LINE L2 -439 2874 2190 182 211 0 26 chr2 33109171 33109209 -220147374 + MER5A DNA MER1_type 59 95 -94 1278 165 80 88 chr2 33110288 33110437 -220146146 - MER2 DNA MER2_type -5 340 191 1628 158 7 47 chr2 33110437 33110734 -220145849 + AluJo SINE Alu 9 293 -19 1278 165 80 88 chr2 33110734 33110923 -220145660 - MER2 DNA MER2_type -154 191 5 220 300 0 0 chr2 33110929 33110989 -220145594 + (TG)n Simple_repeat Simple_repeat 1 60 0 227 296 57 0 chr2 33111001 33111089 -220145494 - MER5B DNA MER1_type -80 98 6 1897 118 66 0 chr2 33112437 33112726 -220143857 - AluSx SINE Alu -4 308 1 1675 190 3 7 chr2 33112743 33113053 -220143530 - AluSx SINE Alu -3 309 1 1416 138 30 9 chr2 33113408 33113639 -220142944 - MER46A DNA MER2_type 0 236 1 186 227 182 0 chr2 33113686 33113730 -220142853 - L2 LINE L2 -33 3239 3188 887 131 0 0 chr2 33113825 33113955 -220142628 - FLAM_C SINE Alu -3 130 1 2381 62 7 10 chr2 33114419 33114723 -220141860 - AluY SINE Alu -8 303 1 557 228 214 34 chr2 33114726 33114932 -220141651 - MIR SINE MIR -18 244 2 204 208 0 42 chr2 33114933 33114981 -220141602 + (TATATG)n Simple_repeat Simple_repeat 3 48 0 255 61 0 0 chr2 33115039 33115072 -220141511 + (TG)n Simple_repeat Simple_repeat 2 34 0 2051 119 3 0 chr2 33115756 33116041 -220140542 - AluSx SINE Alu -26 286 1 1655 169 11 7 chr2 33116615 33116922 -220139661 - AluSg SINE Alu 0 309 2 194 355 55 0 chr2 33117427 33117537 -220139046 + L2 LINE L2 3167 3282 -31 592 263 0 0 chr2 33117570 33117703 -220138880 + FLAM_A SINE Alu 1 133 0 1734 163 28 31 chr2 33118734 33119060 -220137523 - MER44D DNA MER2_type -4 605 11 242 290 0 0 chr2 33119751 33119820 -220136763 - Charlie8 DNA MER1_type -1000 1417 1349 21 0 0 0 chr2 33119895 33119916 -220136667 + AT_rich Low_complexity Low_complexity 1 21 0 1411 162 142 3 chr2 33119961 33120263 -220136320 + L1MA4 LINE L1 5952 6295 -5 521 167 0 0 chr2 33120467 33120551 -220136032 + AluJ/FLAM SINE Alu 1 84 -228 2291 88 7 0 chr2 33121723 33122019 -220134564 - AluSp SINE Alu -15 298 1 6484 79 19 33 chr2 33122615 33124556 -220132027 - SVA Other Other -520 1386 7 2087 76 62 4 chr2 33126060 33126336 -220130247 + AluY SINE Alu 1 292 -19 505 348 128 25 chr2 33126415 33126533 -220130050 + L2 LINE L2 2409 2513 -801 1848 177 30 15 chr2 33126533 33126872 -220129711 + MER2 DNA MER2_type 1 344 0 505 348 128 25 chr2 33126872 33127161 -220129422 + L2 LINE L2 2513 2858 -456 3431 220 164 4 chr2 33127181 33128373 -220128210 + Charlie1a DNA MER1_type 3 1454 -1 185 287 202 0 chr2 33128656 33128750 -220127833 + L2 LINE L2 3192 3304 -9 2333 78 7 10 chr2 33130960 33131266 -220125317 + AluY SINE Alu 1 305 -6 1499 123 0 26 chr2 33131278 33131505 -220125078 + AluSg/x SINE Alu 77 297 -15 311 273 40 55 chr2 33131844 33132015 -220124568 - L1ME3A LINE L1 -18 6221 6051 561 250 161 40 chr2 33132113 33132417 -220124166 - L1ME3A LINE L1 -243 5996 5656 244 286 36 0 chr2 33132519 33132631 -220123952 - L1ME3A LINE L1 -3433 2782 2667 870 241 41 57 chr2 33132736 33132795 -220123788 - L1MEc LINE L1 -3691 2524 2466 605 202 65 0 chr2 33132795 33132919 -220123664 - FLAM_A SINE Alu -1 132 1 870 241 41 57 chr2 33132919 33133308 -220123275 - L1MEc LINE L1 -3749 2466 2132 21 0 0 0 chr2 33133483 33133504 -220123079 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 33133812 33133834 -220122749 + AT_rich Low_complexity Low_complexity 1 22 0 246 231 43 113 chr2 33134041 33134297 -220122286 - L1MEc LINE L1 -4925 1471 1234 1694 186 16 7 chr2 33134547 33134853 -220121730 - AluSx SINE Alu -3 309 1 555 191 66 95 chr2 33134955 33135334 -220121249 - L1MB7 LINE L1 -77 6107 5634 595 234 75 108 chr2 33135346 33135997 -220120586 - L1MB7 LINE L1 -1441 4705 4076 453 58 14 72 chr2 33135997 33136136 -220120447 + (TA)n Simple_repeat Simple_repeat 2 132 0 2187 112 10 0 chr2 33136136 33136440 -220120143 - AluSx SINE Alu -5 307 1 1083 134 0 0 chr2 33136857 33137036 -220119547 + (TCTCC)n Simple_repeat Simple_repeat 2 180 0 1607 172 42 0 chr2 33137068 33137207 -220119376 - AluSx SINE Alu -39 273 141 360 0 0 0 chr2 33137207 33137247 -220119336 + (TG)n Simple_repeat Simple_repeat 2 41 0 1607 172 42 0 chr2 33137247 33137369 -220119214 - AluSx SINE Alu -171 141 1 207 276 233 0 chr2 33137585 33137701 -220118882 + MIR SINE MIR 18 160 -102 25 0 0 0 chr2 33137904 33137929 -220118654 + AT_rich Low_complexity Low_complexity 1 25 0 2058 131 7 0 chr2 33138538 33138836 -220117747 + AluSx SINE Alu 1 300 -12 2048 137 9 49 chr2 33139652 33140002 -220116581 + MER1B DNA MER1_type 2 337 0 183 139 0 0 chr2 33140403 33140439 -220116144 + (CAG)n Simple_repeat Simple_repeat 1 36 0 24 0 0 0 chr2 33141044 33141068 -220115515 + AT_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr2 33141113 33141133 -220115450 + (T)n Simple_repeat Simple_repeat 1 20 0 805 190 0 65 chr2 33142677 33142701 -220113882 - FAM SINE Alu -139 172 148 2392 77 0 0 chr2 33142701 33143000 -220113583 + AluY SINE Alu 1 299 -12 805 190 0 65 chr2 33143000 33143159 -220113424 - FAM SINE Alu -163 148 1 23 54 0 0 chr2 33143666 33143703 -220112880 + AT_rich Low_complexity Low_complexity 1 37 0 2035 116 0 7 chr2 33147956 33148232 -220108351 - AluSx SINE Alu -38 274 1 22 0 0 0 chr2 33149112 33149134 -220107449 + AT_rich Low_complexity Low_complexity 1 22 0 180 286 0 36 chr2 33149213 33149269 -220107314 + MIR SINE MIR 91 144 -64 396 0 0 0 chr2 33149570 33149614 -220106969 + (TG)n Simple_repeat Simple_repeat 2 45 0 1789 171 3 13 chr2 33149615 33149919 -220106664 - AluJo SINE Alu -11 301 1 25 51 0 0 chr2 33150009 33150048 -220106535 + AT_rich Low_complexity Low_complexity 1 39 0 486 262 47 33 chr2 33150319 33150533 -220106050 + L1MC4 LINE L1 7683 7899 -143 1055 142 228 14 chr2 33150825 33151044 -220105539 + AluSg1 SINE Alu 35 300 -9 972 223 93 30 chr2 33151273 33151615 -220104968 + L1MD2 LINE L1 5972 7798 -10 25 90 0 0 chr2 33151739 33151806 -220104777 + AT_rich Low_complexity Low_complexity 1 67 0 900 161 0 0 chr2 33153480 33153617 -220102966 + FLAM_C SINE Alu 1 137 -6 24 0 0 0 chr2 33153781 33153805 -220102778 + AT_rich Low_complexity Low_complexity 1 24 0 2014 112 17 7 chr2 33153924 33154219 -220102364 + AluSc SINE Alu 3 300 -9 409 329 102 27 chr2 33154908 33155133 -220101450 + MIR SINE MIR 14 255 -7 218 213 0 0 chr2 33155807 33155854 -220100729 + T-rich Low_complexity Low_complexity 1 47 0 2226 119 0 3 chr2 33156492 33156803 -220099780 - AluSg SINE Alu 0 310 1 2340 103 0 0 chr2 33157348 33157650 -220098933 + AluY SINE Alu 1 302 -9 1951 149 3 0 chr2 33158784 33159080 -220097503 - AluSx SINE Alu -15 297 1 21 36 0 0 chr2 33159123 33159151 -220097432 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 33159175 33159199 -220097384 + AT_rich Low_complexity Low_complexity 1 24 0 1620 236 96 31 chr2 33159244 33159820 -220096763 - L1MC4 LINE L1 -141 7901 7289 399 205 0 7 chr2 33159845 33159927 -220096656 - AluSx SINE Alu -28 274 199 647 170 0 0 chr2 33159933 33160039 -220096544 - AluSx SINE Alu -207 106 1 1937 124 19 10 chr2 33160134 33160441 -220096142 + AluSx SINE Alu 1 310 -2 335 178 0 75 chr2 33160527 33160564 -220096019 - L1MB3 LINE L1 0 6183 6145 609 220 23 15 chr2 33160564 33160696 -220095887 - FLAM_A SINE Alu 0 133 1 335 178 0 75 chr2 33160696 33160765 -220095818 - L1MB3 LINE L1 -38 6145 6085 1286 276 108 25 chr2 33160773 33161263 -220095320 - L1MC4 LINE L1 -1040 7002 6472 824 168 13 0 chr2 33162107 33162256 -220094327 - MER58B DNA MER1_type -8 333 183 208 319 239 0 chr2 33162713 33162826 -220093757 - L3 LINE CR1 -50 1527 1388 509 240 19 0 chr2 33163025 33163129 -220093454 - MER5B DNA MER1_type -63 115 10 1164 194 5 14 chr2 33163925 33164141 -220092442 + AluJo SINE Alu 5 218 -94 26 30 0 0 chr2 33164883 33164916 -220091667 + AT_rich Low_complexity Low_complexity 1 33 0 40 73 0 0 chr2 33165289 33165371 -220091212 + AT_rich Low_complexity Low_complexity 1 82 0 949 153 89 0 chr2 33165392 33165549 -220091034 + AluSx SINE Alu 1 171 -141 1801 137 47 0 chr2 33166128 33166405 -220090178 + AluSx SINE Alu 1 290 -22 268 258 175 0 chr2 33168105 33168202 -220088381 - L2 LINE L2 0 3313 3200 222 348 22 0 chr2 33168952 33169044 -220087539 + MIR SINE MIR 57 150 -112 2347 82 0 0 chr2 33170095 33170388 -220086195 - AluSc SINE Alu -16 293 1 1435 168 7 56 chr2 33170482 33170786 -220085797 + AluJo SINE Alu 1 289 -23 1003 269 57 60 chr2 33171380 33171703 -220084880 - L1MEc LINE L1 -896 5319 4997 2170 72 35 14 chr2 33171703 33171993 -220084590 - AluY SINE Alu -15 296 1 1003 269 57 60 chr2 33171993 33172096 -220084487 - L1MEc LINE L1 -1218 4997 4895 1872 152 14 0 chr2 33172096 33172386 -220084197 - AluSx SINE Alu -18 294 1 1003 269 57 60 chr2 33172386 33172672 -220083911 - L1MEc LINE L1 -1320 4895 4608 709 302 24 39 chr2 33172665 33173046 -220083537 - L1MEc LINE L1 -1925 4290 3916 * 420 290 26 34 chr2 33173047 33173179 -220083404 - FLAM_A SINE Alu -11 122 5 394 265 211 8 chr2 33173278 33173671 -220082912 - L1MEc LINE L1 -2544 3671 3199 648 247 76 35 chr2 33173750 33173923 -220082660 - L1MEc LINE L1 -4124 2272 2108 1421 175 52 28 chr2 33173923 33174214 -220082369 - AluSx SINE Alu -14 298 1 648 247 76 35 chr2 33174214 33174409 -220082174 - L1MEc LINE L1 -4288 2108 1889 23 0 0 0 chr2 33174418 33174441 -220082142 + AT_rich Low_complexity Low_complexity 1 23 0 1507 198 24 3 chr2 33174454 33174742 -220081841 - AluSg SINE Alu -16 294 1 862 138 0 22 chr2 33174742 33174880 -220081703 - AluSq/x SINE Alu -177 135 1 312 70 0 0 chr2 33175362 33175405 -220081178 + (TC)n Simple_repeat Simple_repeat 2 44 0 516 148 0 0 chr2 33176202 33176283 -220080300 - AluSq SINE Alu -99 214 134 1279 111 25 64 chr2 33176283 33176457 -220080126 - AluSg/x SINE Alu -14 296 132 2180 123 7 3 chr2 33176457 33176767 -220079816 - AluSx SINE Alu -1 311 1 1279 111 25 64 chr2 33176767 33176827 -220079756 - AluSg/x SINE Alu -178 132 71 846 102 0 0 chr2 33177425 33177533 -220079050 - AluSq/x SINE Alu -205 108 1 2238 89 7 0 chr2 33179271 33179584 -220076999 - AluSq SINE Alu 0 315 1 1304 172 94 4 chr2 33179747 33179892 -220076691 - AluSx SINE Alu -21 291 160 399 21 0 0 chr2 33179892 33179940 -220076643 + (TG)n Simple_repeat Simple_repeat 2 49 0 1304 172 94 4 chr2 33179940 33180061 -220076522 - AluSx SINE Alu -152 160 1 2395 63 0 16 chr2 33180248 33180576 -220076007 + AluY SINE Alu 1 311 0 1586 167 24 10 chr2 33181722 33182010 -220074573 - AluJo SINE Alu -20 292 1 284 300 164 0 chr2 33182611 33182751 -220073832 + MIR SINE MIR 11 173 -89 1961 161 0 13 chr2 33183010 33183326 -220073257 + AluSx SINE Alu 1 312 0 243 0 0 0 chr2 33184139 33184166 -220072417 + (T)n Simple_repeat Simple_repeat 1 27 0 1779 118 65 0 chr2 33184665 33184944 -220071639 + AluY SINE Alu 1 297 -14 2050 140 0 0 chr2 33185115 33185415 -220071168 - AluSg SINE Alu -10 300 1 1610 121 125 8 chr2 33185993 33186241 -220070342 - AluSg1 SINE Alu -32 277 1 342 67 0 0 chr2 33187046 33187091 -220069492 + (T)n Simple_repeat Simple_repeat 1 45 0 2039 103 3 68 chr2 33187171 33187492 -220069091 - AluY SINE Alu -11 300 1 27 29 0 0 chr2 33187663 33187697 -220068886 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr2 33187850 33187871 -220068712 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 33188375 33188403 -220068180 + AT_rich Low_complexity Low_complexity 1 28 0 355 259 46 46 chr2 33188410 33188541 -220068042 + MER20B DNA MER1_type 52 182 -601 1462 148 53 42 chr2 33189360 33189491 -220067092 + AluJo SINE Alu 5 133 -179 2277 92 0 3 chr2 33189491 33189783 -220066800 + AluSg SINE Alu 1 291 -19 1462 148 53 42 chr2 33189783 33189934 -220066649 + AluJo SINE Alu 133 290 -22 1169 226 0 15 chr2 33189936 33190202 -220066381 + AluJo SINE Alu 36 297 -15 192 125 0 0 chr2 33190672 33190704 -220065879 + (TA)n Simple_repeat Simple_repeat 2 33 0 2271 109 0 7 chr2 33192094 33192396 -220064187 + AluSx SINE Alu 1 300 -12 414 75 0 0 chr2 33192416 33192469 -220064114 + Alu SINE Alu 243 295 -17 26 64 0 0 chr2 33192529 33192576 -220064007 + AT_rich Low_complexity Low_complexity 1 47 0 25 31 0 0 chr2 33192848 33192880 -220063703 + AT_rich Low_complexity Low_complexity 1 32 0 1682 169 0 36 chr2 33192911 33193212 -220063371 + AluJb SINE Alu 1 290 -22 1133 165 55 77 chr2 33193454 33193727 -220062856 - AluJb SINE Alu -29 283 17 2100 118 0 16 chr2 33195367 33195680 -220060903 - AluSx SINE Alu -4 308 1 181 347 40 0 chr2 33195743 33195818 -220060765 - L2 LINE L2 -19 3253 3176 315 311 61 23 chr2 33196000 33196132 -220060451 - L2 LINE L2 -1004 2310 2174 26 0 0 0 chr2 33196240 33196266 -220060317 + AT_rich Low_complexity Low_complexity 1 26 0 1814 156 11 0 chr2 33196398 33196681 -220059902 + AluSx SINE Alu 1 286 -26 497 96 12 0 chr2 33197172 33197255 -220059328 + FLAM_C SINE Alu 60 143 0 2132 107 9 35 chr2 33197325 33197642 -220058941 - AluSx SINE Alu -3 309 1 246 326 61 11 chr2 33197686 33197867 -220058716 - L1MEc LINE L1 -4907 1477 1288 817 212 53 12 chr2 33198063 33198308 -220058275 - L1MEc LINE L1 -5511 1052 798 231 195 110 37 chr2 33198360 33198442 -220058141 + Charlie5 DNA MER1_type 35 122 -2490 685 286 125 21 chr2 33198585 33199008 -220057575 - L1MEc LINE L1 -5873 690 224 25 75 0 0 chr2 33199059 33199112 -220057471 + AT_rich Low_complexity Low_complexity 1 53 0 1623 199 34 0 chr2 33199634 33199925 -220056658 + AluJb SINE Alu 1 301 -11 207 328 216 29 chr2 33200285 33200456 -220056127 + MIR SINE MIR 41 243 -19 22 35 0 0 chr2 33201015 33201044 -220055539 + AT_rich Low_complexity Low_complexity 1 29 0 15494 129 48 17 chr2 33201932 33204083 -220052500 + Tigger4(Zombi) DNA MER2_type 1 2250 -481 2330 99 0 0 chr2 33204083 33204386 -220052197 - AluSq SINE Alu -10 303 1 15494 129 48 17 chr2 33204386 33204883 -220051700 + Tigger4(Zombi) DNA MER2_type 2250 2730 -1 301 157 0 71 chr2 33205018 33205088 -220051495 - BSR/Beta Satellite Satellite -33 109 45 * 692 253 60 0 chr2 33205072 33205238 -220051345 + MER58A DNA MER1_type 34 209 -15 326 231 147 45 chr2 33206059 33206083 -220050500 - L1ME4a LINE L1 -238 5883 5863 1960 138 3 0 chr2 33206083 33206372 -220050211 - AluSx SINE Alu -22 290 1 326 231 147 45 chr2 33206372 33206503 -220050080 - L1ME4a LINE L1 -258 5863 5712 291 283 0 12 chr2 33206888 33207009 -220049574 - MER5A DNA MER1_type 0 189 13 333 0 0 0 chr2 33207997 33208034 -220048549 + (TG)n Simple_repeat Simple_repeat 1 37 0 1757 216 47 20 chr2 33208067 33208517 -220048066 - MLT1C LTR MaLR -5 462 1 2173 214 25 101 chr2 33208737 33209447 -220047136 + MLT1-int LTR MaLR 5 660 -711 351 177 0 0 chr2 33209500 33209562 -220047021 + MLT1-int LTR MaLR 661 722 -649 1130 205 57 4 chr2 33209572 33209801 -220046782 + MLT1D LTR MaLR 265 505 0 284 216 135 0 chr2 33209805 33209879 -220046704 - L1M4 LINE L1 -2440 3706 3623 2144 113 0 0 chr2 33209970 33210254 -220046329 + AluSq SINE Alu 17 300 -13 380 282 84 93 chr2 33210277 33210311 -220046272 + L1M4c LINE L1 1136 1169 -5215 2462 90 0 0 chr2 33210311 33210622 -220045961 + AluSx SINE Alu 1 311 -1 380 282 84 93 chr2 33210622 33210888 -220045695 + L1M4c LINE L1 1169 1433 -4951 623 199 7 29 chr2 33210888 33211024 -220045559 + FLAM_A SINE Alu 1 133 0 380 282 84 93 chr2 33211024 33211151 -220045432 + L1M4c LINE L1 1433 1560 -4824 7392 31 2 0 chr2 33211172 33213054 -220043529 - L1PA4 LINE L1 0 6155 4221 2099 29 85 0 chr2 33213053 33213325 -220043258 + L1P LINE L1 2544 2838 -3308 * 2389 62 7 3 chr2 33213547 33213853 -220042730 + AluY SINE Alu 1 307 -4 244 313 148 68 chr2 33213853 33214252 -220042331 + L1ME LINE L1 229 659 -5546 1654 127 93 4 chr2 33214511 33214770 -220041813 + AluSx SINE Alu 1 282 -30 294 73 0 0 chr2 33214771 33214812 -220041771 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 323 267 0 11 chr2 33214819 33214909 -220041674 + L1ME LINE L1 2271 2359 -4037 1968 260 99 15 chr2 33214971 33215930 -220040653 + L1ME LINE L1 2449 3488 -2727 394 321 51 33 chr2 33216485 33216759 -220039824 - L1ME3 LINE L1 -203 5959 5681 779 211 126 82 chr2 33217627 33217969 -220038614 - L1MC4 LINE L1 -142 7900 7544 2069 248 86 8 chr2 33217974 33218623 -220037960 + L1MC4 LINE L1 6658 7357 -685 2050 128 24 0 chr2 33218664 33218962 -220037621 - AluSx SINE Alu -7 305 1 201 147 0 0 chr2 33220332 33220366 -220036217 + (T)n Simple_repeat Simple_repeat 1 34 0 23 54 0 0 chr2 33220380 33220417 -220036166 + AT_rich Low_complexity Low_complexity 1 37 0 333 192 0 0 chr2 33220640 33220692 -220035891 - Tigger2 DNA MER2_type -2666 52 1 413 172 21 0 chr2 33220770 33220863 -220035720 - L1MA4A LINE L1 -5 6298 6204 329 283 131 7 chr2 33222062 33222160 -220034423 + L1ME LINE L1 4200 4285 -1930 2241 117 0 0 chr2 33222160 33222460 -220034123 + AluSq SINE Alu 1 300 -13 329 283 131 7 chr2 33222460 33222644 -220033939 + L1ME LINE L1 4285 4517 -1698 1240 179 0 0 chr2 33222661 33222856 -220033727 + AluSx SINE Alu 3 197 -115 316 255 132 9 chr2 33222914 33223020 -220033563 + L1ME LINE L1 4630 4748 -1467 1904 195 99 2 chr2 33223209 33223645 -220032938 - L1MB5 LINE L1 -155 6019 5542 24 32 0 0 chr2 33223914 33223945 -220032638 + AT_rich Low_complexity Low_complexity 1 31 0 805 68 10 0 chr2 33224228 33224331 -220032252 - AluSg/x SINE Alu -8 302 199 2103 114 3 3 chr2 33224362 33224652 -220031931 + AluSq SINE Alu 1 290 -23 21 36 0 0 chr2 33225021 33225049 -220031534 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 33226379 33226400 -220030183 + AT_rich Low_complexity Low_complexity 1 21 0 253 222 0 0 chr2 33227042 33227105 -220029478 + (TAAA)n Simple_repeat Simple_repeat 4 66 0 1922 154 3 0 chr2 33227152 33227444 -220029139 - AluSx SINE Alu -19 293 1 575 226 39 0 chr2 33227605 33227760 -220028823 - L1MC4 LINE L1 -372 7670 7510 540 163 0 0 chr2 33228584 33228670 -220027913 + AluSg/x SINE Alu 205 290 -19 237 238 0 0 chr2 33228717 33228780 -220027803 + (TTTA)n Simple_repeat Simple_repeat 4 66 0 1436 87 0 0 chr2 33228906 33229090 -220027493 + AluSp SINE Alu 130 313 0 2011 108 3 24 chr2 33229250 33229545 -220027038 - AluSx SINE Alu -12 300 12 27 29 0 0 chr2 33230900 33230934 -220025649 + AT_rich Low_complexity Low_complexity 1 34 0 656 188 45 0 chr2 33231101 33231213 -220025370 + FLAM_C SINE Alu 9 125 -18 2005 98 41 3 chr2 33231221 33231516 -220025067 + AluSg SINE Alu 1 306 -4 1253 127 229 0 chr2 33231551 33231796 -220024787 + AluJb SINE Alu 1 301 -11 1931 127 38 3 chr2 33232529 33232821 -220023762 + AluSx SINE Alu 1 302 -10 335 191 0 0 chr2 33234164 33234227 -220022356 - L1MA10 LINE L1 -19 6315 6253 22 0 0 0 chr2 33235580 33235602 -220020981 + AT_rich Low_complexity Low_complexity 1 22 0 2034 102 28 7 chr2 33235602 33235885 -220020698 + AluSx SINE Alu 1 289 -23 1330 212 52 7 chr2 33236443 33236731 -220019852 - AluJo SINE Alu -11 301 1 2264 92 0 0 chr2 33236780 33237073 -220019510 + AluSg SINE Alu 1 293 -17 2047 141 7 0 chr2 33237093 33237399 -220019184 - AluSx SINE Alu -1 311 4 31 0 0 0 chr2 33237586 33237617 -220018966 + AT_rich Low_complexity Low_complexity 1 31 0 2248 92 3 0 chr2 33237626 33237918 -220018665 + AluSg SINE Alu 2 294 -16 21 0 0 0 chr2 33238099 33238120 -220018463 + AT_rich Low_complexity Low_complexity 1 21 0 2831 157 63 10 chr2 33238176 33238781 -220017802 - L1MC2 LINE L1 -31 6313 5677 609 290 41 5 chr2 33238780 33239001 -220017582 - L1M4 LINE L1 -1326 4820 4592 * 21 57 0 0 chr2 33239347 33239382 -220017201 + AT_rich Low_complexity Low_complexity 1 35 0 1624 248 22 30 chr2 33239503 33239659 -220016924 - L1MB8 LINE L1 -5 6173 6017 2327 96 3 0 chr2 33239659 33239962 -220016621 + AluSq SINE Alu 1 304 -9 1624 248 22 30 chr2 33239962 33240538 -220016045 - L1MB8 LINE L1 -161 6017 5324 1281 243 34 89 chr2 33240530 33241003 -220015580 - L1M4b LINE L1 -6392 467 21 * 2530 117 14 0 chr2 33241502 33241870 -220014713 - THE1C LTR MaLR -2 373 1 462 197 0 0 chr2 33242134 33242210 -220014373 - AluJ/FRAM SINE Alu -21 291 216 1524 179 33 7 chr2 33242241 33242515 -220014068 - AluJo SINE Alu -31 281 1 2110 117 17 0 chr2 33242832 33243130 -220013453 - AluSx SINE Alu -7 305 3 787 219 91 0 chr2 33243254 33243441 -220013142 + MER3 DNA MER1_type 6 209 0 2239 96 0 35 chr2 33243682 33243994 -220012589 + AluY SINE Alu 1 301 -10 1591 180 3 7 chr2 33244093 33244377 -220012206 + AluJb SINE Alu 23 305 -7 2006 142 3 0 chr2 33244425 33244720 -220011863 + AluSq SINE Alu 1 296 -17 447 161 25 0 chr2 33244737 33244818 -220011765 - L1PB3 LINE L1 -59 6095 6013 1880 148 3 20 chr2 33244847 33245151 -220011432 - AluSx SINE Alu -13 299 1 309 188 0 0 chr2 33245151 33245215 -220011368 - L1M4 LINE L1 -1681 4465 4402 27 29 0 0 chr2 33245217 33245251 -220011332 + AT_rich Low_complexity Low_complexity 1 34 0 1581 195 0 11 chr2 33245251 33245528 -220011055 - AluJo SINE Alu -32 280 7 2865 196 48 3 chr2 33245537 33246156 -220010427 - L1M4 LINE L1 -1736 4410 3764 25 31 0 0 chr2 33246156 33246188 -220010395 + AT_rich Low_complexity Low_complexity 1 32 0 887 170 0 0 chr2 33246205 33246346 -220010237 - AluSq/x SINE Alu -171 141 1 1995 127 3 3 chr2 33246347 33246661 -220009922 - AluSx SINE Alu 0 314 1 1268 206 58 8 chr2 33246685 33246824 -220009759 - AluJo SINE Alu -37 275 144 243 0 0 0 chr2 33246824 33246851 -220009732 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 1268 206 58 8 chr2 33246851 33246968 -220009615 - AluJo SINE Alu -168 144 6 932 220 28 4 chr2 33246968 33247223 -220009360 - L1M4 LINE L1 -2351 3795 3535 804 225 0 0 chr2 33247690 33247863 -220008720 - AluSc SINE Alu -136 173 1 2032 131 3 3 chr2 33247981 33248279 -220008304 + AluSx SINE Alu 5 302 -10 406 200 11 22 chr2 33248732 33248822 -220007761 + MIR SINE MIR 103 191 -71 204 215 92 0 chr2 33248864 33248929 -220007654 + MIR SINE MIR 186 256 -6 2280 85 0 0 chr2 33248932 33249226 -220007357 + AluSg SINE Alu 1 294 -16 27 49 0 0 chr2 33250289 33250330 -220006253 + GC_rich Low_complexity Low_complexity 1 41 0 1196 92 0 6 chr2 33251050 33251223 -220005360 + AluSg/x SINE Alu 129 300 -10 232 218 13 13 chr2 33251758 33251836 -220004747 + CT-rich Low_complexity Low_complexity 1 78 0 1832 132 3 26 chr2 33252010 33252313 -220004270 - AluJb SINE Alu -12 300 5 920 117 0 7 chr2 33252313 33252450 -220004133 - AluJo SINE Alu -171 141 6 1665 142 10 35 chr2 33252595 33252905 -220003678 + AluSx SINE Alu 1 302 -10 2300 75 3 0 chr2 33252943 33253236 -220003347 + AluSp SINE Alu 1 294 -19 26 30 0 0 chr2 33253564 33253597 -220002986 + AT_rich Low_complexity Low_complexity 1 33 0 771 164 17 0 chr2 33253602 33253718 -220002865 - AluJb SINE Alu -194 118 1 497 245 36 0 chr2 33253730 33253869 -220002714 - L1ME3A LINE L1 -300 5870 5727 286 305 116 0 chr2 33253961 33254056 -220002527 + MIR SINE MIR 6 111 -151 36 23 0 0 chr2 33254114 33254157 -220002426 + AT_rich Low_complexity Low_complexity 1 43 0 694 188 0 62 chr2 33254160 33254304 -220002279 - FLAM_C SINE Alu -6 137 3 21 36 0 0 chr2 33254304 33254332 -220002251 + AT_rich Low_complexity Low_complexity 1 28 0 1083 139 0 0 chr2 33254364 33254529 -220002054 - AluJb SINE Alu -6 306 142 2358 65 0 13 chr2 33254537 33254844 -220001739 - AluY SINE Alu -8 303 1 991 139 6 35 chr2 33255024 33255197 -220001386 - FRAM SINE Alu -9 167 1 1840 106 38 0 chr2 33255437 33255701 -220000882 + AluSc SINE Alu 1 274 -35 1285 124 0 5 chr2 33255701 33255906 -220000677 + AluSg/x SINE Alu 103 308 -301 1943 130 3 0 chr2 33255906 33256191 -220000392 + AluSx SINE Alu 1 286 -26 1285 124 0 5 chr2 33256191 33256209 -220000374 + AluSg/x SINE Alu 308 609 0 22 0 0 0 chr2 33256981 33257003 -219999580 + AT_rich Low_complexity Low_complexity 1 22 0 589 221 7 0 chr2 33257053 33257193 -219999390 - MER113 DNA MER1_type? -223 298 158 1091 181 9 19 chr2 33257215 33257265 -219999318 + AluJb SINE Alu 85 134 -178 2336 70 0 0 chr2 33257265 33257565 -219999018 + AluY SINE Alu 1 300 -11 1091 181 9 19 chr2 33257565 33257730 -219998853 + AluJb SINE Alu 134 298 -14 2016 118 16 0 chr2 33258056 33258361 -219998222 + AluSg SINE Alu 1 310 0 914 183 0 27 chr2 33258361 33258528 -219998055 + AluSg/x SINE Alu 132 295 -17 2270 101 0 0 chr2 33258528 33258836 -219997747 + AluSg SINE Alu 1 308 -2 914 183 0 27 chr2 33258836 33258854 -219997729 + AluSg/x SINE Alu 295 312 0 782 161 0 0 chr2 33259494 33259606 -219996977 + FLAM_C SINE Alu 2 113 -30 23 42 0 21 chr2 33259610 33259631 -219996952 + AT_rich Low_complexity Low_complexity 1 21 -26 2128 101 0 0 chr2 33259631 33259918 -219996665 + AluSg SINE Alu 1 287 -23 23 42 0 21 chr2 33259918 33259944 -219996639 + AT_rich Low_complexity Low_complexity 21 47 0 2088 105 10 0 chr2 33259944 33260239 -219996344 + AluSx SINE Alu 1 298 -14 2105 100 7 0 chr2 33260306 33260605 -219995978 + AluSp SINE Alu 1 301 -12 1118 253 57 64 chr2 33260780 33261135 -219995448 + L1MEc LINE L1 136 489 -5907 2564 143 34 2 chr2 33261135 33261548 -219995035 - MSTB LTR MaLR 0 426 1 1118 253 57 64 chr2 33261548 33261631 -219994952 + L1MEc LINE L1 489 571 -5825 2034 121 13 0 chr2 33261633 33261931 -219994652 + AluSq SINE Alu 2 303 -10 452 70 0 0 chr2 33261935 33261992 -219994591 + AluSg/x SINE Alu 192 248 -62 1021 164 17 59 chr2 33261992 33262230 -219994353 + AluJo SINE Alu 85 312 0 1917 106 46 3 chr2 33262238 33262520 -219994063 + AluSc SINE Alu 2 295 -14 1922 143 3 13 chr2 33262567 33262882 -219993701 + AluSx SINE Alu 1 312 0 1471 167 35 7 chr2 33262899 33263181 -219993402 - AluJb SINE Alu -11 301 12 356 225 15 10 chr2 33263191 33263298 -219993285 + L1M2c LINE L1 1317 1798 -4585 2367 60 7 3 chr2 33263304 33263604 -219992979 + AluY SINE Alu 1 301 -10 1419 77 0 10 chr2 33263605 33263800 -219992783 + AluY SINE Alu 106 298 -13 968 259 128 29 chr2 33263802 33264215 -219992368 + L1MEc LINE L1 1399 1852 -4544 1224 159 49 9 chr2 33264224 33264450 -219992133 - AluJb SINE Alu -18 294 60 2180 93 17 0 chr2 33264475 33264766 -219991817 - AluSx SINE Alu -16 296 1 21 0 0 0 chr2 33264861 33264882 -219991701 + AT_rich Low_complexity Low_complexity 1 21 0 340 253 24 0 chr2 33264925 33265008 -219991575 - MIR SINE MIR -140 122 38 1689 79 162 26 chr2 33265049 33265314 -219991269 - AluSx SINE Alu -1 301 1 538 214 0 0 chr2 33265351 33265454 -219991129 - AluJb SINE Alu -30 282 180 2140 110 7 0 chr2 33265553 33265861 -219990722 - AluSx SINE Alu -1 311 2 2034 84 3 78 chr2 33267872 33268058 -219988525 - AluSg SINE Alu -13 297 143 2189 85 0 41 chr2 33268058 33268375 -219988208 - AluSc SINE Alu -4 305 2 2034 84 3 78 chr2 33268375 33268509 -219988074 - AluSg SINE Alu -167 143 1 701 147 199 0 chr2 33268859 33268994 -219987589 + AluJb SINE Alu 135 296 -16 450 194 163 10 chr2 33268994 33269092 -219987491 + AluY SINE Alu 1 113 -198 22 56 0 0 chr2 33269094 33269130 -219987453 + AT_rich Low_complexity Low_complexity 1 36 0 1029 197 24 5 chr2 33269289 33269502 -219987081 + AluJo SINE Alu 86 302 -10 2348 78 0 3 chr2 33269663 33269972 -219986611 - AluY SINE Alu -3 308 1 1878 125 17 3 chr2 33270106 33270395 -219986188 + AluSx SINE Alu 1 293 -19 1392 171 65 7 chr2 33270459 33270734 -219985849 + AluJb SINE Alu 1 291 -21 1724 82 129 0 chr2 33271150 33271406 -219985177 + AluSc SINE Alu 1 289 -20 1958 133 0 0 chr2 33271596 33271897 -219984686 + AluSx SINE Alu 1 301 -11 817 224 60 35 chr2 33272223 33272525 -219984058 + MLT2D LTR ERVL 1 511 -43 215 276 78 26 chr2 33272919 33273035 -219983548 - L2 LINE L2 -817 2497 2376 451 239 46 23 chr2 33274720 33274850 -219981733 - AluJb SINE Alu -37 275 143 1746 156 10 23 chr2 33274856 33275163 -219981420 - AluSx SINE Alu -9 303 1 1999 138 0 3 chr2 33275230 33275534 -219981049 + AluJb SINE Alu 1 303 -9 282 180 67 4 chr2 33275978 33276090 -219980493 + AluJo SINE Alu 1 136 -166 2412 37 3 13 chr2 33276090 33276388 -219980195 + AluY SINE Alu 1 295 -16 1776 87 0 12 chr2 33276395 33276636 -219979947 + AluY SINE Alu 54 291 -20 839 154 7 20 chr2 33276740 33276889 -219979694 + FRAM SINE Alu 1 40 0 2405 44 0 34 chr2 33277063 33277384 -219979199 + AluY SINE Alu 1 310 -1 2214 31 38 17 chr2 33277501 33277792 -219978791 + AluY SINE Alu 1 297 -14 266 320 0 31 chr2 33279175 33279272 -219977311 + MIR3 SINE MIR 70 163 -45 251 245 286 10 chr2 33279334 33279432 -219977151 - MIR SINE MIR -68 140 16 822 216 12 6 chr2 33279711 33279873 -219976710 - FRAM SINE Alu -16 160 1 225 0 0 0 chr2 33279873 33279898 -219976685 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2098 89 0 3 chr2 33279898 33280180 -219976403 - AluSc SINE Alu -28 281 1 7531 74 2 1 chr2 33280223 33281191 -219975392 + LTR5 LTR ERVK 1 969 0 1853 104 43 4 chr2 33281558 33281837 -219974746 - AluSg SINE Alu -14 296 7 863 307 184 13 chr2 33281866 33282517 -219974066 + L2 LINE L2 2397 3176 -137 2186 103 3 0 chr2 33282518 33282818 -219973765 - AluSg SINE Alu -9 301 1 3363 146 82 63 chr2 33282855 33283459 -219973124 + L1MB8 LINE L1 5417 6039 -139 1697 158 0 14 chr2 33283459 33283743 -219972840 - AluJb SINE Alu -20 292 13 3363 146 82 63 chr2 33283743 33283886 -219972697 + L1MB8 LINE L1 6039 6178 0 500 217 191 0 chr2 33283990 33284147 -219972436 + MIR SINE MIR 52 238 -24 340 233 0 0 chr2 33284215 33284275 -219972308 + MLT1D LTR MaLR 1 60 -445 1234 137 64 5 chr2 33284275 33284479 -219972104 - MLT1A1 LTR MaLR 0 365 150 802 150 0 14 chr2 33284479 33284619 -219971964 - FRAM SINE Alu -6 170 33 325 78 0 0 chr2 33284623 33284674 -219971909 - L1MA3 LINE L1 0 6305 6255 860 161 40 7 chr2 33284676 33284825 -219971758 - MLT1A1 LTR MaLR -211 154 1 1561 101 22 9 chr2 33284952 33285180 -219971403 + AluSq SINE Alu 1 231 -82 363 23 0 0 chr2 33285197 33285241 -219971342 + (TC)n Simple_repeat Simple_repeat 2 45 0 207 0 0 0 chr2 33285240 33285263 -219971320 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 879 223 96 0 chr2 33285274 33285581 -219971002 + L1ME4a LINE L1 5136 5462 -702 265 209 105 9 chr2 33285579 33285684 -219970899 + L1ME4a LINE L1 6002 6116 -5 * 1627 181 0 17 chr2 33285692 33285990 -219970593 + AluJo SINE Alu 1 293 -19 1879 161 24 24 chr2 33286039 33286374 -219970209 - MER1B DNA MER1_type 0 337 3 1705 125 3 66 chr2 33286557 33286883 -219969700 - AluSx SINE Alu 0 307 1 2085 116 0 10 chr2 33286893 33287196 -219969387 - AluSx SINE Alu -12 300 1 277 233 78 22 chr2 33287523 33287613 -219968970 - LTR67 LTR ERVL -453 104 10 1963 139 0 3 chr2 33287613 33287907 -219968676 + AluSx SINE Alu 1 293 -19 308 313 47 16 chr2 33287995 33288123 -219968460 - L3 LINE CR1 -291 1286 1155 439 167 35 11 chr2 33288227 33288401 -219968182 + (TA)n Simple_repeat Simple_repeat 1 178 0 32 26 0 0 chr2 33288405 33288444 -219968139 + AT_rich Low_complexity Low_complexity 1 39 0 2036 110 10 0 chr2 33288518 33288817 -219967766 + AluSq SINE Alu 1 302 -11 1184 107 0 6 chr2 33288819 33288987 -219967596 + AluSg/x SINE Alu 136 302 -8 218 320 200 11 chr2 33289232 33289407 -219967176 - MIR SINE MIR -52 210 3 1543 221 131 13 chr2 33289631 33290083 -219966500 - MLT1D LTR MaLR 0 505 1 336 264 46 61 chr2 33290125 33290176 -219966407 - L1ME4a LINE L1 -5 6116 6066 1639 160 3 21 chr2 33290176 33290526 -219966057 + AluSx SINE Alu 1 345 0 336 264 46 61 chr2 33290526 33290670 -219965913 - L1ME4a LINE L1 -55 6066 5923 2214 109 3 3 chr2 33291291 33291603 -219964980 + AluSx SINE Alu 1 312 0 2298 74 3 3 chr2 33292318 33292617 -219963966 - AluSg SINE Alu -11 299 1 309 308 10 29 chr2 33292649 33292753 -219963830 - MIR3 SINE MIR -6 202 101 253 318 23 0 chr2 33292837 33292925 -219963658 - MIR SINE MIR -73 135 46 927 180 126 24 chr2 33292959 33293283 -219963300 - MLT1B LTR MaLR -2 503 1 353 301 116 14 chr2 33293409 33293555 -219963028 - MIR SINE MIR -74 188 28 473 136 0 0 chr2 33293755 33293821 -219962762 + AluS SINE Alu 1 66 -247 33 0 0 0 chr2 33293821 33293854 -219962729 + AT_rich Low_complexity Low_complexity 1 33 0 1968 142 0 3 chr2 33293976 33294278 -219962305 - AluSx SINE Alu -11 301 1 182 245 113 19 chr2 33294576 33294629 -219961954 - MIR SINE MIR -185 77 20 2376 72 0 0 chr2 33294662 33294969 -219961614 - AluSc SINE Alu -1 308 2 388 228 37 44 chr2 33294980 33295116 -219961467 + Charlie8 DNA MER1_type 61 195 -2222 253 266 109 120 chr2 33295324 33295508 -219961075 + MIR SINE MIR 3 184 -78 751 107 90 25 chr2 33295555 33295677 -219960906 + AluSq/x SINE Alu 2 131 -182 2226 105 0 0 chr2 33295679 33295983 -219960600 + AluSx SINE Alu 1 304 -8 2368 88 0 0 chr2 33295987 33296319 -219960264 + AluY SINE Alu 2 333 0 1999 138 0 3 chr2 33296322 33296633 -219959950 + AluSx SINE Alu 1 310 -2 561 236 0 0 chr2 33296640 33296750 -219959833 + MER96B DNA MER1_type? 307 416 -1 653 309 94 59 chr2 33296751 33297085 -219959498 + L2 LINE L2 2652 2973 -340 2032 120 17 3 chr2 33297085 33297385 -219959198 - AluSx SINE Alu -8 304 1 653 309 94 59 chr2 33297385 33297680 -219958903 + L2 LINE L2 2973 3295 -18 843 153 0 0 chr2 33297687 33297818 -219958765 + FLAM_C SINE Alu 1 131 -2 1926 137 0 13 chr2 33298161 33298460 -219958123 + AluSx SINE Alu 1 295 -17 308 222 22 44 chr2 33298703 33298793 -219957790 + MER5A DNA MER1_type 4 91 -98 278 319 7 64 chr2 33298890 33299031 -219957552 - MER5A DNA MER1_type 0 189 57 378 0 0 0 chr2 33299055 33299097 -219957486 + (TG)n Simple_repeat Simple_repeat 1 42 0 26 0 0 0 chr2 33299109 33299135 -219957448 + AT_rich Low_complexity Low_complexity 1 26 0 2221 86 7 0 chr2 33299216 33299508 -219957075 + AluY SINE Alu 1 294 -17 204 295 124 0 chr2 33299635 33299740 -219956843 + L2 LINE L2 3194 3311 -2 * 386 244 178 0 chr2 33299739 33299874 -219956709 - MIR SINE MIR -1 261 103 509 116 53 53 chr2 33299887 33299982 -219956601 + LTR47A LTR ERVL 1 95 -357 286 205 86 43 chr2 33300150 33300267 -219956316 - L1MC4 LINE L1 -5 8037 7916 1432 56 0 0 chr2 33300349 33300527 -219956056 - AluY SINE Alu -7 304 127 22 0 0 0 chr2 33351905 33351927 -219904656 + AT_rich Low_complexity Low_complexity 1 22 0 2018 99 32 7 chr2 33351927 33352209 -219904374 + AluSx SINE Alu 1 289 -23 655 24 0 0 chr2 33352446 33352529 -219904054 + L1P LINE L1 2756 2838 -3308 2339 69 7 3 chr2 33352751 33353057 -219903526 + AluY SINE Alu 1 307 -4 244 313 148 68 chr2 33353057 33353456 -219903127 + L1ME LINE L1 229 659 -5546 1654 127 93 4 chr2 33353715 33353974 -219902609 + AluSx SINE Alu 1 282 -30 294 73 0 0 chr2 33353975 33354016 -219902567 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 323 267 0 11 chr2 33354023 33354113 -219902470 + L1ME LINE L1 2271 2359 -4037 758 292 106 25 chr2 33354174 33354664 -219901919 + L1ME LINE L1 2448 2977 -3238 1583 180 3 7 chr2 33354813 33355096 -219901487 - AluJb SINE Alu -8 304 23 2239 96 0 35 chr2 33355195 33355507 -219901076 - AluY SINE Alu -10 301 1 787 219 91 0 chr2 33355748 33355935 -219900648 - MER3 DNA MER1_type 0 209 6 2110 117 17 0 chr2 33356059 33356357 -219900226 + AluSx SINE Alu 3 305 -7 1524 179 33 7 chr2 33356674 33356948 -219899635 + AluJo SINE Alu 1 281 -31 462 197 0 0 chr2 33356979 33357055 -219899528 + AluJ/FRAM SINE Alu 216 291 -21 2530 117 14 0 chr2 33357319 33357687 -219898896 + THE1C LTR MaLR 1 373 -2 1275 243 34 91 chr2 33358186 33358660 -219897923 + L1M4b LINE L1 21 467 -6392 * 1276 350 67 50 chr2 33358652 33359331 -219897252 + L1MB8 LINE L1 5324 6021 -157 2327 96 3 0 chr2 33359331 33359634 -219896949 - AluSq SINE Alu -9 304 1 1276 350 67 50 chr2 33359634 33359790 -219896793 + L1MB8 LINE L1 6021 6173 -5 21 57 0 0 chr2 33359911 33359946 -219896637 + AT_rich Low_complexity Low_complexity 1 35 0 609 290 41 5 chr2 33360292 33360513 -219896070 + L1M4 LINE L1 4592 4820 -1326 * 2831 157 63 10 chr2 33360512 33361117 -219895466 + L1MC2 LINE L1 5677 6313 -31 21 0 0 0 chr2 33361173 33361194 -219895389 + AT_rich Low_complexity Low_complexity 1 21 0 2176 119 0 0 chr2 33361375 33361669 -219894914 - AluSg SINE Alu -16 294 1 309 188 0 0 chr2 33361669 33361733 -219894850 - L1 LINE L1 -1681 4465 4402 27 29 0 0 chr2 33361735 33361769 -219894814 + AT_rich Low_complexity Low_complexity 1 34 0 1581 195 0 11 chr2 33361769 33362046 -219894537 - AluJo SINE Alu -32 280 7 2865 196 48 3 chr2 33362055 33362674 -219893909 - L1 LINE L1 -1736 4410 3764 25 31 0 0 chr2 33362674 33362706 -219893877 + AT_rich Low_complexity Low_complexity 1 32 0 887 170 0 0 chr2 33362723 33362864 -219893719 - AluSq/x SINE Alu -171 141 1 1995 127 3 3 chr2 33362865 33363179 -219893404 - AluSx SINE Alu 0 314 1 1250 202 60 8 chr2 33363203 33363342 -219893241 - AluJo SINE Alu -37 275 145 243 0 0 0 chr2 33363342 33363369 -219893214 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 1250 202 60 8 chr2 33363369 33363481 -219893102 - AluJo SINE Alu -167 145 11 551 44 0 0 chr2 33363586 33363654 -219892929 - L1P LINE L1 -3535 2611 2544 * 7392 32 8 2 chr2 33363653 33365534 -219891049 + L1PA4 LINE L1 4221 6155 0 380 282 84 93 chr2 33365555 33365682 -219890901 - L1M4c LINE L1 -4824 1560 1433 623 199 7 29 chr2 33365682 33365818 -219890765 - FLAM_A SINE Alu 0 133 1 380 282 84 93 chr2 33365818 33366084 -219890499 - L1M4c LINE L1 -4951 1433 1169 2454 90 0 0 chr2 33366084 33366395 -219890188 - AluSx SINE Alu -1 311 1 380 282 84 93 chr2 33366395 33366429 -219890154 - L1M4c LINE L1 -5215 1169 1136 2178 109 0 0 chr2 33366452 33366737 -219889846 - AluSq SINE Alu -12 301 17 284 216 135 0 chr2 33366828 33366902 -219889681 + L1M4 LINE L1 3623 3706 -2440 1139 205 57 4 chr2 33366906 33367135 -219889448 - MLT1D LTR MaLR 0 505 265 327 194 0 0 chr2 33367145 33367207 -219889376 - MLT1-int LTR MaLR -649 722 661 2187 213 25 101 chr2 33367260 33367970 -219888613 - MLT1-int LTR MaLR -711 660 5 1730 218 47 20 chr2 33368190 33368640 -219887943 + MLT1C LTR MaLR 1 462 -5 423 0 0 0 chr2 33368673 33368720 -219887863 + (CA)n Simple_repeat Simple_repeat 1 47 0 291 283 0 12 chr2 33369708 33369829 -219886754 + MER5A DNA MER1_type 13 189 0 258 219 114 32 chr2 33370214 33370337 -219886246 + L1ME LINE L1 5712 5844 -277 1960 138 3 0 chr2 33370346 33370635 -219885948 + AluSx SINE Alu 1 290 -22 266 279 83 21 chr2 33371300 33371540 -219885043 + L1M4 LINE L1 3165 3419 -2727 408 318 51 33 chr2 33372095 33372369 -219884214 - L1ME3 LINE L1 -203 5959 5681 765 214 126 82 chr2 33373237 33373579 -219883004 - L1MC4 LINE L1 -142 7900 7544 2069 248 86 8 chr2 33373584 33374233 -219882350 + L1MC4 LINE L1 6658 7357 -685 2074 124 24 0 chr2 33374274 33374572 -219882011 - AluSx SINE Alu -7 305 1 201 147 0 0 chr2 33375942 33375976 -219880607 + (T)n Simple_repeat Simple_repeat 1 34 0 23 54 0 0 chr2 33375990 33376027 -219880556 + AT_rich Low_complexity Low_complexity 1 37 0 333 192 0 0 chr2 33376250 33376302 -219880281 - Tigger2 DNA MER2_type -2666 52 1 413 172 21 0 chr2 33376380 33376473 -219880110 - L1MA4A LINE L1 -5 6298 6204 329 283 131 7 chr2 33377670 33377768 -219878815 + L1M4 LINE L1 4131 4216 -1930 2241 117 0 0 chr2 33377768 33378068 -219878515 + AluSq SINE Alu 1 300 -13 329 283 131 7 chr2 33378068 33378252 -219878331 + L1M4 LINE L1 4216 4448 -1698 1240 179 0 0 chr2 33378269 33378464 -219878119 + AluSx SINE Alu 3 197 -115 316 255 132 9 chr2 33378522 33378628 -219877955 + L1M4 LINE L1 4561 4679 -1467 1933 193 99 2 chr2 33378817 33379253 -219877330 - L1MB5 LINE L1 -155 6019 5542 24 32 0 0 chr2 33379524 33379555 -219877028 + AT_rich Low_complexity Low_complexity 1 31 0 314 254 16 0 chr2 33379782 33379845 -219876738 - AluJ/FLAM SINE Alu -222 80 17 2100 118 0 16 chr2 33381485 33381798 -219874785 - AluSx SINE Alu -4 308 1 181 347 40 0 chr2 33381861 33381936 -219874647 - L2 LINE L2 -19 3253 3176 321 305 61 15 chr2 33382118 33382249 -219874334 - L2 LINE L2 -1004 2310 2174 26 0 0 0 chr2 33382357 33382383 -219874200 + AT_rich Low_complexity Low_complexity 1 26 0 1814 156 11 0 chr2 33382515 33382798 -219873785 + AluSx SINE Alu 1 286 -26 497 96 12 0 chr2 33383289 33383372 -219873211 + FLAM_A SINE Alu 59 142 0 2049 117 9 32 chr2 33383446 33383762 -219872821 - AluSx SINE Alu -3 309 1 246 326 61 11 chr2 33383806 33383987 -219872596 - L1MEc LINE L1 -4907 1477 1288 817 212 53 12 chr2 33384183 33384428 -219872155 - L1MEc LINE L1 -5511 1052 798 231 195 110 37 chr2 33384480 33384562 -219872021 + Charlie5 DNA MER1_type 35 122 -2490 685 286 125 21 chr2 33384705 33385128 -219871455 - L1MEc LINE L1 -5873 690 224 25 75 0 0 chr2 33385179 33385232 -219871351 + AT_rich Low_complexity Low_complexity 1 53 0 1623 199 34 0 chr2 33385754 33386045 -219870538 + AluJb SINE Alu 1 301 -11 207 328 216 29 chr2 33386405 33386576 -219870007 + MIR SINE MIR 41 243 -19 22 35 0 0 chr2 33387135 33387164 -219869419 + AT_rich Low_complexity Low_complexity 1 29 0 15472 129 48 17 chr2 33388052 33390203 -219866380 + Tigger4(Zombi) DNA MER2_type 1 2251 -480 2305 102 0 0 chr2 33390203 33390506 -219866077 - AluSq SINE Alu -10 303 1 15472 129 48 17 chr2 33390506 33391002 -219865581 + Tigger4(Zombi) DNA MER2_type 2251 2730 -1 805 68 10 0 chr2 33391485 33391588 -219864995 - AluSg/x SINE Alu -8 302 199 2174 110 0 3 chr2 33391619 33391910 -219864673 + AluSq SINE Alu 1 290 -23 21 36 0 0 chr2 33392279 33392307 -219864276 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 33393637 33393658 -219862925 + AT_rich Low_complexity Low_complexity 1 21 0 237 238 0 0 chr2 33394300 33394363 -219862220 + (TAAA)n Simple_repeat Simple_repeat 4 66 0 1922 154 3 0 chr2 33394410 33394702 -219861881 - AluSx SINE Alu -19 293 1 575 226 39 0 chr2 33394863 33395018 -219861565 - L1MC4 LINE L1 -372 7670 7510 477 186 0 0 chr2 33395844 33395930 -219860653 + AluSg/x SINE Alu 206 291 -19 273 224 0 0 chr2 33395973 33396040 -219860543 + (TTTA)n Simple_repeat Simple_repeat 4 70 0 1438 94 5 33 chr2 33396157 33396370 -219860213 - AluSq SINE Alu -95 218 12 656 188 45 0 chr2 33397926 33398038 -219858545 + FLAM_C SINE Alu 9 125 -18 2005 98 41 3 chr2 33398046 33398341 -219858242 + AluSg SINE Alu 1 306 -4 1253 127 229 0 chr2 33398376 33398621 -219857962 + AluJb SINE Alu 1 301 -11 1942 128 37 3 chr2 33399354 33399650 -219856933 + AluSx SINE Alu 1 306 -6 4097 211 52 27 chr2 33400906 33402070 -219854513 - L1 LINE L1 -2434 3712 2519 299 300 144 11 chr2 33402142 33402322 -219854261 - L1ME LINE L1 -456 5665 5462 252 314 23 12 chr2 33402618 33402704 -219853879 + L2 LINE L2 120 206 -3108 306 284 95 76 chr2 33402742 33402918 -219853665 + L2 LINE L2 3096 3278 -35 1951 138 17 0 chr2 33402918 33403215 -219853368 - AluSx SINE Alu -10 302 1 306 284 95 76 chr2 33403215 33403249 -219853334 + L2 LINE L2 3278 3310 -3 1949 145 108 44 chr2 33403806 33403874 -219852709 - Tigger2a DNA MER2_type -2275 433 371 1348 148 183 15 chr2 33403874 33404137 -219852446 - AluJb SINE Alu -5 307 1 1949 145 108 44 chr2 33404137 33404475 -219852108 - Tigger2a DNA MER2_type -2337 371 1 2132 121 3 0 chr2 33404478 33404767 -219851816 - AluSp SINE Alu -23 290 1 2490 63 0 3 chr2 33405202 33405505 -219851078 + AluY SINE Alu 1 302 -9 349 283 72 20 chr2 33405685 33405837 -219850746 - L1ME4a LINE L1 -234 5887 5728 366 138 0 0 chr2 33406475 33406540 -219850043 - L1PB3 LINE L1 -4 6150 6086 1750 159 3 14 chr2 33408233 33408523 -219848060 + AluSx SINE Alu 1 287 -25 288 0 0 0 chr2 33408523 33408555 -219848028 + (CATA)n Simple_repeat Simple_repeat 2 33 0 358 131 50 0 chr2 33408699 33408798 -219847785 + (TA)n Simple_repeat Simple_repeat 2 105 0 1527 179 3 34 chr2 33409155 33409446 -219847137 + AluJo SINE Alu 31 312 0 2287 83 3 13 chr2 33409675 33409977 -219846606 - AluSx SINE Alu -13 299 1 282 335 64 65 chr2 33410055 33410337 -219846246 - L2 LINE L2 -256 3016 2730 23 0 0 0 chr2 33411042 33411065 -219845518 + AT_rich Low_complexity Low_complexity 1 23 0 283 172 57 98 chr2 33411214 33411336 -219845247 + MER113 DNA MER1_type? 80 196 -325 320 280 69 40 chr2 33411387 33411562 -219845021 + L1MC/D LINE L1 5641 5820 -1988 2139 115 13 0 chr2 33411574 33411878 -219844705 - AluSx SINE Alu -4 308 1 679 134 0 59 chr2 33411946 33412065 -219844518 + AluJb SINE Alu 1 112 -200 1857 127 36 7 chr2 33412201 33412505 -219844078 + AluSx SINE Alu 1 312 0 1953 138 3 7 chr2 33413454 33413751 -219842832 - AluSx SINE Alu -16 296 1 766 161 0 8 chr2 33413810 33413928 -219842655 + FLAM_C SINE Alu 1 117 -26 35 0 0 0 chr2 33413932 33413967 -219842616 + AT_rich Low_complexity Low_complexity 1 35 0 2002 143 0 10 chr2 33413967 33414274 -219842309 + AluSx SINE Alu 1 304 -8 23 0 0 0 chr2 33414343 33414366 -219842217 + AT_rich Low_complexity Low_complexity 1 23 0 2292 112 0 0 chr2 33415096 33415399 -219841184 - AluSx SINE Alu -9 303 1 25 51 0 0 chr2 33415966 33416005 -219840578 + AT_rich Low_complexity Low_complexity 1 39 0 1703 166 48 0 chr2 33416143 33416438 -219840145 - AluJb SINE Alu -3 309 1 259 389 22 14 chr2 33416552 33416691 -219839892 - MIR3 SINE MIR -35 173 34 2164 124 0 0 chr2 33416826 33417116 -219839467 + AluSg SINE Alu 1 290 -20 1919 151 41 0 chr2 33417175 33417466 -219839117 + AluSg SINE Alu 1 303 -7 2125 99 24 7 chr2 33417797 33418089 -219838494 + AluSq SINE Alu 1 297 -16 2293 103 3 0 chr2 33422312 33422614 -219833969 - AluSp SINE Alu -10 303 1 1553 202 0 18 chr2 33424134 33424416 -219832167 + AluJb SINE Alu 6 282 -30 360 64 0 0 chr2 33424418 33424465 -219832118 + (TGGA)n Simple_repeat Simple_repeat 3 49 0 26 82 0 0 chr2 33424689 33424750 -219831833 + AT_rich Low_complexity Low_complexity 1 61 0 34 24 0 0 chr2 33425711 33425752 -219830831 + AT_rich Low_complexity Low_complexity 1 41 0 2154 90 45 0 chr2 33425921 33426209 -219830374 + AluSg SINE Alu 1 301 -9 341 171 341 0 chr2 33426253 33426341 -219830242 - MLT1F1 LTR MaLR -384 183 66 311 312 86 9 chr2 33426837 33427058 -219829525 - L1ME4a LINE L1 -255 5866 5629 482 165 25 0 chr2 33427858 33427937 -219828646 - AluJb SINE Alu -19 293 213 2145 119 3 0 chr2 33428473 33428766 -219827817 + AluSx SINE Alu 14 307 -5 2058 152 7 0 chr2 33428766 33429063 -219827520 + AluSx SINE Alu 1 299 -13 1926 140 7 0 chr2 33429077 33429363 -219827220 + AluSx SINE Alu 1 288 -24 1324 119 59 9 chr2 33430613 33430832 -219825751 + MER30 DNA MER1_type 1 230 0 2370 78 3 0 chr2 33431020 33431314 -219825269 + AluSp SINE Alu 2 296 -17 28 0 0 0 chr2 33431340 33431368 -219825215 + AT_rich Low_complexity Low_complexity 1 28 0 529 202 20 105 chr2 33431583 33431767 -219824816 + Charlie1 DNA MER1_type 2365 2524 -237 3647 137 45 9 chr2 33431767 33432440 -219824143 + L1MA5 LINE L1 5600 6296 -4 529 202 20 105 chr2 33432440 33432502 -219824081 + Charlie1 DNA MER1_type 2524 2590 -171 1752 126 3 35 chr2 33433183 33433468 -219823115 + AluSx SINE Alu 32 307 -5 24 0 0 0 chr2 33433557 33433581 -219823002 + AT_rich Low_complexity Low_complexity 1 24 0 185 62 0 31 chr2 33433586 33433618 -219822965 + (TA)n Simple_repeat Simple_repeat 1 31 0 209 293 37 0 chr2 33433829 33433911 -219822672 - MIR SINE MIR -54 208 124 781 142 4 147 chr2 33434442 33434599 -219821984 - L1PA15 LINE L1 0 6165 6048 1950 165 30 0 chr2 33434599 33434902 -219821681 - AluSx SINE Alu 0 312 1 781 142 4 147 chr2 33434902 33434969 -219821614 - L1PA15 LINE L1 -117 6048 5973 1989 132 20 7 chr2 33435301 33435605 -219820978 + AluSx SINE Alu 1 308 -4 2017 148 0 16 chr2 33436025 33436329 -219820254 + AluSx SINE Alu 1 299 -13 2244 106 0 10 chr2 33436443 33436746 -219819837 + AluSq SINE Alu 1 300 -13 1859 128 43 33 chr2 33437415 33437720 -219818863 + AluSx SINE Alu 1 308 -4 1110 173 71 5 chr2 33437819 33438016 -219818567 + AluJo SINE Alu 87 296 -16 262 94 0 38 chr2 33438093 33438146 -219818437 + (TTTCC)n Simple_repeat Simple_repeat 5 55 0 2139 87 4 7 chr2 33438159 33438435 -219818148 - AluSq SINE Alu -38 275 1 1872 154 0 13 chr2 33438597 33438903 -219817680 - AluSx SINE Alu -10 302 1 243 0 0 0 chr2 33439005 33439032 -219817551 + (TG)n Simple_repeat Simple_repeat 2 28 0 453 125 0 0 chr2 33439415 33439487 -219817096 + AluS SINE Alu 227 298 -12 1488 130 173 4 chr2 33440490 33440744 -219815839 - AluSg1 SINE Alu -12 297 1 993 79 0 0 chr2 33440828 33440954 -219815629 - AluY SINE Alu -15 296 171 50 65 0 0 chr2 33440989 33441081 -219815502 + AT_rich Low_complexity Low_complexity 1 92 0 1410 204 47 23 chr2 33441588 33441887 -219814696 - AluJo SINE Alu -6 306 1 785 213 91 15 chr2 33442261 33442524 -219814059 + L1MC5 LINE L1 7631 7913 -48 184 324 154 0 chr2 33442723 33442905 -219813678 + L2 LINE L2 2846 3055 -217 252 0 0 0 chr2 33442906 33442934 -219813649 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 703 165 0 0 chr2 33442962 33443071 -219813512 - AluSq SINE Alu -71 242 134 1521 128 0 77 chr2 33443072 33443372 -219813211 - AluSx SINE Alu 0 312 48 2077 135 0 13 chr2 33444265 33444568 -219812015 + AluSq SINE Alu 1 299 -14 1669 170 159 5 chr2 33444614 33444985 -219811598 - MSTA LTR MaLR 0 428 1 232 314 0 92 chr2 33445153 33445306 -219811277 + L2 LINE L2 3164 3302 -11 2108 96 0 7 chr2 33445342 33445652 -219810931 - AluSc SINE Alu 0 308 1 1922 150 0 10 chr2 33446011 33446305 -219810278 + AluSx SINE Alu 17 307 -5 1610 174 45 3 chr2 33446542 33446829 -219809754 + AluJb SINE Alu 1 299 -13 2203 90 7 3 chr2 33446841 33447130 -219809453 + AluSg SINE Alu 1 290 -20 344 245 29 20 chr2 33447251 33447353 -219809230 + L2 LINE L2 3208 3310 -3 25 0 0 0 chr2 33447934 33447959 -219808624 + AT_rich Low_complexity Low_complexity 1 25 0 1413 110 5 0 chr2 33448774 33448965 -219807618 + AluSq SINE Alu 1 192 -121 214 296 185 71 chr2 33449858 33450166 -219806417 - L2 LINE L2 -441 2873 2531 1902 155 7 0 chr2 33450458 33450748 -219805835 + AluJb SINE Alu 1 292 -20 329 199 171 55 chr2 33450760 33450906 -219805677 - L1ME LINE L1 -350 5771 5609 2401 76 0 0 chr2 33451258 33451549 -219805034 + AluSc SINE Alu 1 291 -18 250 346 65 19 chr2 33452952 33453059 -219803524 - L2 LINE L2 -24 3248 3137 2282 101 13 0 chr2 33453496 33453803 -219802780 - AluY SINE Alu 0 311 1 1104 110 0 30 chr2 33453877 33454041 -219802542 - AluSg/x SINE Alu -18 292 134 1940 116 22 0 chr2 33454041 33454311 -219802272 - AluSx SINE Alu -38 274 1 1580 211 73 45 chr2 33454480 33454945 -219801638 + L1ME1 LINE L1 5683 6160 -6 700 227 57 31 chr2 33455580 33455774 -219800809 + HAL1 LINE L1 574 772 -1735 2338 74 0 19 chr2 33456140 33456451 -219800132 - AluY SINE Alu -6 305 1 396 103 0 0 chr2 33456792 33456850 -219799733 + (TCCC)n Simple_repeat Simple_repeat 3 60 0 1981 98 4 0 chr2 33456854 33457119 -219799464 - AluSx SINE Alu -46 266 1 395 245 16 125 chr2 33458319 33458453 -219798130 - MIR SINE MIR -34 228 119 2193 75 7 0 chr2 33458453 33458777 -219797806 - AluSx SINE Alu 0 328 3 395 245 16 125 chr2 33458777 33458833 -219797750 - MIR SINE MIR -143 119 58 2008 107 7 10 chr2 33458848 33459139 -219797444 - AluSq SINE Alu -23 290 1 2564 46 0 16 chr2 33459152 33459458 -219797125 - AluY SINE Alu -10 301 1 201 189 0 38 chr2 33459584 33459637 -219796946 + (TG)n Simple_repeat Simple_repeat 1 51 0 234 347 129 27 chr2 33459676 33459929 -219796654 - L2 LINE L2 -254 3059 2778 2227 112 3 0 chr2 33460741 33461046 -219795537 + AluSx SINE Alu 1 306 -6 24 32 0 0 chr2 33461493 33461524 -219795059 + AT_rich Low_complexity Low_complexity 1 31 0 2109 109 16 10 chr2 33461526 33461830 -219794753 - AluSx SINE Alu -6 306 1 829 123 14 41 chr2 33461882 33462028 -219794555 - FLAM_C SINE Alu -1 142 1 235 61 41 82 chr2 33462590 33462639 -219793944 + MER58 DNA MER1_type 68 114 -2306 255 114 209 0 chr2 33462640 33462694 -219793889 + MER58 DNA MER1_type 2357 2420 0 976 230 25 0 chr2 33462922 33463126 -219793457 + MER3 DNA MER1_type 1 209 0 1701 168 34 17 chr2 33463132 33463423 -219793160 - AluJo SINE Alu -16 296 1 24 32 0 0 chr2 33463750 33463781 -219792802 + AT_rich Low_complexity Low_complexity 1 31 0 1655 171 25 4 chr2 33464020 33464294 -219792289 - AluJb SINE Alu -18 294 15 2123 124 0 0 chr2 33464386 33464676 -219791907 - AluSx SINE Alu -22 290 1 2434 86 3 0 chr2 33465124 33465426 -219791157 + AluSg SINE Alu 1 303 -7 2368 87 3 0 chr2 33465933 33466232 -219790351 - AluSx SINE Alu -12 300 1 272 310 133 26 chr2 33466280 33466393 -219790190 - MIR SINE MIR -68 140 16 191 376 96 13 chr2 33466514 33466671 -219789912 - L2 LINE L2 -218 3054 2885 2261 109 0 3 chr2 33467039 33467350 -219789233 - AluSg SINE Alu 0 310 1 271 271 37 65 chr2 33467499 33467606 -219788977 + L2 LINE L2 2262 2365 -949 205 224 53 66 chr2 33467841 33467917 -219788666 + MIR3 SINE MIR 93 167 -41 2292 98 10 0 chr2 33468090 33468397 -219788186 - AluSx SINE Alu -2 310 1 279 306 52 91 chr2 33468452 33468560 -219788023 - MIR SINE MIR -3 259 148 2438 72 0 0 chr2 33468560 33468851 -219787732 - AluY SINE Alu -20 291 1 279 306 52 91 chr2 33468851 33468994 -219787589 - MIR SINE MIR -114 148 18 1964 135 20 7 chr2 33469442 33469746 -219786837 + AluSx SINE Alu 2 309 -3 2192 103 3 0 chr2 33470420 33470747 -219785836 + AluSx SINE Alu 1 328 0 1125 252 37 7 chr2 33471010 33471280 -219785303 - MER58 DNA MER1_type -63 278 1 1336 101 0 0 chr2 33471397 33471565 -219785018 - AluSp SINE Alu -12 301 134 2134 129 0 3 chr2 33471565 33471876 -219784707 - AluSx SINE Alu -2 310 1 2170 134 0 3 chr2 33471967 33472272 -219784311 - AluSx SINE Alu -8 304 1 185 0 40 0 chr2 33472368 33472393 -219784190 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1843 160 0 3 chr2 33472395 33472688 -219783895 - AluJb SINE Alu -20 292 1 1172 136 0 0 chr2 33472696 33472858 -219783725 - AluSg/x SINE Alu -19 291 130 2113 119 3 7 chr2 33473017 33473326 -219783257 - AluSx SINE Alu 0 308 1 2018 110 3 49 chr2 33473474 33473619 -219782964 + AluSx SINE Alu 3 128 -184 2222 125 0 3 chr2 33473619 33473922 -219782661 + AluSx SINE Alu 3 304 -8 2018 110 3 49 chr2 33473922 33474084 -219782499 + AluSx SINE Alu 128 296 -16 849 151 0 43 chr2 33474308 33474447 -219782136 - FLAM_A SINE Alu 0 133 1 306 206 0 0 chr2 33474517 33474585 -219781998 + CT-rich Low_complexity Low_complexity 1 68 0 695 202 0 0 chr2 33474585 33474709 -219781874 - FLAM_A SINE Alu -1 141 18 281 256 93 0 chr2 33474976 33475062 -219781521 + MIR SINE MIR 56 149 -113 1328 46 0 0 chr2 33475276 33475427 -219781156 - L1PA4 LINE L1 -8 6147 5997 2279 103 3 10 chr2 33475428 33475738 -219780845 - AluSx SINE Alu -4 308 1 2272 92 0 0 chr2 33475755 33476047 -219780536 - AluY SINE Alu -19 292 1 760 194 23 8 chr2 33476055 33476184 -219780399 - AluJo SINE Alu -176 136 6 2267 95 0 13 chr2 33476277 33476582 -219780001 - AluY SINE Alu -10 301 1 1062 195 180 45 chr2 33476693 33476960 -219779623 - AluSq SINE Alu 0 303 1 978 212 12 0 chr2 33477411 33477576 -219779007 + FAM SINE Alu 1 167 -8 2222 102 0 7 chr2 33477854 33478148 -219778435 - AluSq SINE Alu -20 293 2 664 230 7 22 chr2 33478160 33478295 -219778288 - FLAM_A SINE Alu 0 133 1 2059 133 3 7 chr2 33478450 33478759 -219777824 + AluJb SINE Alu 3 310 -2 2296 101 0 3 chr2 33479265 33479563 -219777020 - AluSg SINE Alu -13 297 1 204 40 0 0 chr2 33480069 33480094 -219776489 + (T)n Simple_repeat Simple_repeat 1 25 0 201 328 0 17 chr2 33480814 33480872 -219775711 - MIR SINE MIR -186 76 20 2185 88 11 0 chr2 33481079 33481363 -219775220 - AluSp SINE Alu -25 288 2 334 239 11 23 chr2 33481712 33481800 -219774783 + MER2 DNA MER2_type 2 88 -257 2201 101 3 0 chr2 33481811 33482097 -219774486 + AluSg SINE Alu 1 287 -23 186 71 0 0 chr2 33482106 33482134 -219774449 + (TAAAA)n Simple_repeat Simple_repeat 3 30 0 2266 114 3 0 chr2 33483039 33483337 -219773246 + AluSx SINE Alu 8 306 -6 22 0 0 0 chr2 33483588 33483610 -219772973 + AT_rich Low_complexity Low_complexity 1 22 0 227 234 182 13 chr2 33483797 33483874 -219772709 - MIR3 SINE MIR -28 180 91 209 293 61 20 chr2 33483974 33484073 -219772510 - MIR SINE MIR -1 261 159 383 200 50 32 chr2 33484115 33484261 -219772322 - L1MA10 LINE L1 -6 6306 6166 1506 156 6 86 chr2 33484261 33484417 -219772166 - AluJo SINE Alu -23 289 122 2209 121 0 0 chr2 33484417 33484715 -219771868 - AluSx SINE Alu -14 298 1 1907 150 3 14 chr2 33484715 33485009 -219771574 - AluSg SINE Alu -19 291 1 1506 156 6 86 chr2 33485009 33485165 -219771418 - AluJo SINE Alu -188 124 1 282 116 0 0 chr2 33485452 33485495 -219771088 - Alu SINE Alu -4 304 262 1047 198 19 10 chr2 33485562 33485769 -219770814 - MER3 DNA MER1_type 0 209 1 448 340 180 10 chr2 33485892 33486286 -219770297 - L2 LINE L2 -5 3267 2807 219 353 0 0 chr2 33486368 33486436 -219770147 - L2 LINE L2 -49 3223 3156 1981 102 0 0 chr2 33486702 33486958 -219769625 - AluY SINE Alu -9 302 47 1697 63 5 0 chr2 33487069 33487274 -219769309 - AluY SINE Alu -8 303 98 2067 113 7 7 chr2 33487555 33487847 -219768736 - AluSq SINE Alu -21 292 1 1452 202 54 0 chr2 33487857 33488134 -219768449 - AluJo SINE Alu -20 292 1 1634 201 3 3 chr2 33488686 33488984 -219767599 - AluJo SINE Alu -14 298 1 21 0 0 0 chr2 33489075 33489096 -219767487 + AT_rich Low_complexity Low_complexity 1 21 0 6412 58 26 6 chr2 33489252 33490068 -219766515 - L1PA7 LINE L1 0 6469 5638 2168 27 58 0 chr2 33490061 33490321 -219766262 + L1PA7 LINE L1 5737 6011 -143 * 17569 78 4 4 chr2 33490321 33492684 -219763899 - L1PA7 LINE L1 -822 5639 3278 4780 98 22 0 chr2 33492682 33493349 -219763234 - L1PA7 LINE L1 -5779 682 1 * 438 75 0 0 chr2 33493352 33493419 -219763164 + (TATG)n Simple_repeat Simple_repeat 2 68 0 2153 104 0 0 chr2 33493422 33493702 -219762881 - AluSg SINE Alu -30 280 1 2202 90 0 45 chr2 33494555 33494866 -219761717 - AluSx SINE Alu -15 297 1 2025 113 7 0 chr2 33495335 33495610 -219760973 + AluSc SINE Alu 4 280 -29 216 0 0 0 chr2 33495613 33495637 -219760946 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 330 304 15 44 chr2 33495925 33496060 -219760523 + MIR SINE MIR 34 164 -98 284 262 56 71 chr2 33496130 33496256 -219760327 + MIR SINE MIR 28 151 -111 2396 86 3 0 chr2 33497134 33497435 -219759148 - AluSx SINE Alu -10 302 1 2045 133 0 29 chr2 33497491 33497626 -219758957 + AluSq SINE Alu 1 138 -175 2452 73 10 19 chr2 33497626 33497940 -219758643 + AluY SINE Alu 1 311 0 2045 133 0 29 chr2 33497940 33498120 -219758463 + AluSq SINE Alu 138 307 -6 498 159 0 0 chr2 33498226 33498314 -219758269 + CT-rich Low_complexity Low_complexity 1 88 0 654 150 0 40 chr2 33498315 33498415 -219758168 - FLAM_C SINE Alu -21 122 27 23 0 0 0 chr2 33498494 33498517 -219758066 + AT_rich Low_complexity Low_complexity 1 23 0 2479 77 0 0 chr2 33498517 33498828 -219757755 + AluY SINE Alu 1 311 0 944 128 7 7 chr2 33498870 33499011 -219757572 - AluJb SINE Alu -171 141 1 2279 109 6 3 chr2 33499322 33499633 -219756950 + AluSx SINE Alu 1 312 0 32 26 0 0 chr2 33499646 33499685 -219756898 + AT_rich Low_complexity Low_complexity 1 39 0 1383 111 5 0 chr2 33499707 33499897 -219756686 - AluSx SINE Alu -121 191 1 419 229 150 0 chr2 33499972 33500112 -219756471 - L1ME1 LINE L1 -6 6160 6000 528 130 150 0 chr2 33500121 33500221 -219756362 - L1ME1 LINE L1 -207 5957 5843 312 247 56 11 chr2 33500236 33500325 -219756258 - L1ME1 LINE L1 -601 5758 5666 2346 112 0 3 chr2 33500325 33500638 -219755945 - AluSx SINE Alu 0 312 1 1518 224 36 17 chr2 33500638 33501058 -219755525 - L1ME1 LINE L1 -813 5333 4906 642 138 11 0 chr2 33501066 33501160 -219755423 - FLAM_C SINE Alu -16 127 33 1021 202 99 11 chr2 33501167 33501429 -219755154 - L1ME1 LINE L1 -1233 4913 4629 294 364 39 26 chr2 33501535 33501766 -219754817 + MIR SINE MIR 29 262 0 2118 237 50 42 chr2 33502552 33502945 -219753638 - L1MC4 LINE L1 -157 7885 7497 2241 103 0 7 chr2 33502945 33503246 -219753337 - AluSq SINE Alu -14 299 1 2118 237 50 42 chr2 33503246 33503432 -219753151 - L1MC4 LINE L1 -545 7497 7298 1973 115 40 0 chr2 33503432 33503710 -219752873 + AluSx SINE Alu 1 289 -23 2118 237 50 42 chr2 33503710 33503765 -219752818 - L1MC4 LINE L1 -744 7298 7245 2444 87 0 0 chr2 33503871 33504170 -219752413 - AluSx SINE Alu -13 299 1 2276 90 0 13 chr2 33504381 33504681 -219751902 - AluY SINE Alu -15 296 1 362 320 127 18 chr2 33504760 33504988 -219751595 - MIR SINE MIR -3 259 7 2394 110 0 0 chr2 33505502 33505811 -219750772 - AluSq SINE Alu -4 309 1 22 35 0 0 chr2 33506102 33506131 -219750452 + AT_rich Low_complexity Low_complexity 1 29 0 2123 129 0 6 chr2 33506197 33506508 -219750075 - AluSg1 SINE Alu 0 309 1 21 0 0 0 chr2 33506767 33506788 -219749795 + AT_rich Low_complexity Low_complexity 1 21 0 712 260 82 46 chr2 33506817 33507170 -219749413 - L1ME3A LINE L1 -211 5951 5585 2268 89 0 20 chr2 33507170 33507472 -219749111 - AluSc SINE Alu -13 296 1 712 260 82 46 chr2 33507472 33507564 -219749019 - L1ME3A LINE L1 -577 5585 5498 1790 157 17 7 chr2 33507700 33507999 -219748584 + AluJb SINE Alu 7 308 -4 197 83 28 0 chr2 33508115 33508151 -219748432 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 2406 72 0 0 chr2 33508153 33508446 -219748137 - AluY SINE Alu -18 293 1 290 346 90 25 chr2 33508857 33509212 -219747371 - L2 LINE L2 -1259 2055 1678 1799 134 40 7 chr2 33509430 33509738 -219746845 + AluSx SINE Alu 1 317 0 578 295 142 11 chr2 33510019 33510300 -219746283 - L2 LINE L2 0 3313 2996 181 315 79 11 chr2 33510958 33511047 -219745536 + L3 LINE CR1 587 681 -896 1783 156 65 26 chr2 33511214 33511566 -219745017 + MER47A DNA MER2_type 1 366 0 24 0 0 0 chr2 33511666 33511690 -219744893 + AT_rich Low_complexity Low_complexity 1 24 0 444 82 0 0 chr2 33511690 33511751 -219744832 + (TG)n Simple_repeat Simple_repeat 2 62 0 2186 96 3 48 chr2 33512388 33512567 -219744016 - AluSq SINE Alu -13 300 139 2418 78 0 10 chr2 33512567 33512874 -219743709 - AluY SINE Alu -7 304 1 2186 96 3 48 chr2 33512874 33513008 -219743575 - AluSq SINE Alu -174 139 1 1974 123 0 14 chr2 33513593 33513877 -219742706 + AluSg SINE Alu 1 280 -30 1931 4 0 0 chr2 33513892 33514120 -219742463 - L1PA2 LINE L1 -249 5906 5679 230 51 77 0 chr2 33514107 33514146 -219742437 + L1PA3 LINE L1 6110 6151 -4 * 350 299 56 30 chr2 33514516 33514713 -219741870 + L1MDa LINE L1 1401 1702 -4724 2236 109 3 6 chr2 33514736 33515049 -219741534 - AluSx SINE Alu 0 312 1 2297 206 94 26 chr2 33515231 33516061 -219740522 + L1M4 LINE L1 3763 4648 -1498 429 245 16 78 chr2 33516070 33516090 -219740493 + L1ME1 LINE L1 138 158 -6047 1702 179 21 3 chr2 33516090 33516380 -219740203 - AluSx SINE Alu -17 295 1 429 245 16 78 chr2 33516380 33516551 -219740032 + L1ME1 LINE L1 158 317 -5888 2122 138 3 10 chr2 33516551 33516863 -219739720 - AluSx SINE Alu -2 310 1 1715 267 50 9 chr2 33516919 33517776 -219738807 + L1ME1 LINE L1 1967 2827 -3388 334 266 47 16 chr2 33517855 33517983 -219738600 + L1ME1 LINE L1 2857 2988 -3227 2458 202 132 11 chr2 33518060 33518996 -219737587 + L1ME1 LINE L1 5126 6169 -66 302 45 23 0 chr2 33519701 33519745 -219736838 + L1MC4 LINE L1 7935 7979 -63 529 191 118 33 chr2 33519745 33519897 -219736686 + MER6B DNA MER2_type 1 165 -45 207 340 48 48 chr2 33520217 33520320 -219736263 - L2 LINE L2 -189 3083 2981 2270 92 17 0 chr2 33521025 33521318 -219735265 - AluSx SINE Alu -14 298 1 31 26 0 0 chr2 33521409 33521447 -219735136 + AT_rich Low_complexity Low_complexity 1 38 0 892 129 8 0 chr2 33521768 33521900 -219734683 - FLAM_C SINE Alu 0 133 1 1392 129 52 8 chr2 33522056 33522304 -219734279 + L1MB2 LINE L1 5906 6164 -7 567 241 51 110 chr2 33522309 33522413 -219734170 + L1M4 LINE L1 4364 4473 -1673 2164 125 0 14 chr2 33522413 33522710 -219733873 + AluSx SINE Alu 5 297 -15 567 241 51 110 chr2 33522710 33522979 -219733604 + L1M4 LINE L1 4473 4715 -1431 893 217 0 6 chr2 33523019 33523194 -219733389 + MER5A DNA MER1_type 1 174 -15 575 248 96 23 chr2 33523197 33523499 -219733084 + L1M4 LINE L1 4753 5076 -1070 256 180 0 66 chr2 33523593 33523654 -219732929 + MIR SINE MIR 201 257 -5 802 153 15 22 chr2 33524142 33524279 -219732304 + AluJb SINE Alu 1 136 -176 1740 182 0 19 chr2 33524390 33524698 -219731885 - AluJo SINE Alu -10 302 1 1585 132 30 0 chr2 33524755 33525020 -219731563 - L1MB3 LINE L1 -19 6164 5892 2110 122 0 34 chr2 33525021 33525158 -219731425 + AluSq SINE Alu 1 141 -172 2441 97 0 0 chr2 33525158 33525468 -219731115 + AluSg SINE Alu 1 310 0 2110 122 0 34 chr2 33525468 33525650 -219730933 + AluSq SINE Alu 141 309 -4 1370 106 0 6 chr2 33525679 33525859 -219730724 + AluSg/x SINE Alu 120 298 -14 1049 190 93 28 chr2 33525862 33525980 -219730603 - L1MB3 LINE L1 -280 5903 5794 2046 119 0 20 chr2 33525980 33526313 -219730270 - AluSx SINE Alu 0 312 1 1049 190 93 28 chr2 33526313 33526483 -219730100 - L1MB3 LINE L1 -389 5794 5596 1902 148 27 3 chr2 33526640 33526937 -219729646 + AluJb SINE Alu 5 308 -4 199 343 56 19 chr2 33527358 33527466 -219729117 - MIR SINE MIR -112 150 39 1682 154 11 4 chr2 33527477 33527737 -219728846 - AluSx SINE Alu -16 296 35 1604 179 25 18 chr2 33527864 33528149 -219728434 - AluJo SINE Alu -25 287 1 207 0 0 0 chr2 33528155 33528178 -219728405 + (TTA)n Simple_repeat Simple_repeat 2 24 0 2540 40 0 3 chr2 33528202 33528499 -219728084 - AluY SINE Alu -15 296 1 288 304 54 0 chr2 33528958 33529050 -219727533 - L2 LINE L2 -246 3067 2971 397 175 109 36 chr2 33529919 33530054 -219726529 - MIR SINE MIR -54 208 60 2112 116 7 7 chr2 33530266 33530559 -219726024 - AluSq SINE Alu -20 293 1 381 294 0 20 chr2 33530813 33530915 -219725668 + L2 LINE L2 3190 3289 -24 361 252 57 16 chr2 33531155 33531278 -219725305 + MIR3 SINE MIR 33 160 -48 297 242 0 0 chr2 33531299 33531361 -219725222 - Charlie8 DNA MER1_type -1001 1416 1355 286 222 0 32 chr2 33531463 33531526 -219725057 - MER5B DNA MER1_type -1 177 117 1391 154 0 26 chr2 33531526 33531760 -219724823 + AluJo SINE Alu 85 312 0 188 194 0 0 chr2 33531822 33531853 -219724730 - MER5B DNA MER1_type -131 47 17 497 284 52 0 chr2 33532762 33532896 -219723687 + MIR SINE MIR 17 157 -105 2227 84 7 0 chr2 33532906 33533190 -219723393 + AluSq SINE Alu 1 286 -27 1426 232 33 25 chr2 33533527 33533889 -219722694 - MLT1A1 LTR MaLR 0 365 1 2099 141 0 3 chr2 33533903 33534207 -219722376 - AluSx SINE Alu -9 303 1 365 197 0 0 chr2 33534216 33534292 -219722291 - L1MC4 LINE L1 0 8042 7967 1453 223 49 25 chr2 33534295 33534716 -219721867 - L1MC4 LINE L1 -166 7657 7198 2030 175 75 10 chr2 33534716 33535116 -219721467 + MSTB LTR MaLR 1 426 0 1453 223 49 25 chr2 33535116 33535180 -219721403 - L1MC4 LINE L1 -625 7198 7137 22 0 0 0 chr2 33535193 33535215 -219721368 + AT_rich Low_complexity Low_complexity 1 22 0 1378 197 14 24 chr2 33535274 33535563 -219721020 - AluJo SINE Alu -16 296 11 656 204 27 18 chr2 33535567 33535788 -219720795 - L1MC4 LINE L1 -820 7222 7000 2331 112 7 0 chr2 33535797 33536102 -219720481 - AluSx SINE Alu -5 307 1 547 239 128 83 chr2 33536235 33536290 -219720293 + MLT1J LTR MaLR 3 54 -457 2280 89 7 3 chr2 33536290 33536582 -219720001 - AluSx SINE Alu -19 293 1 547 239 128 83 chr2 33536582 33536815 -219719768 + MLT1J LTR MaLR 54 304 -207 1570 182 156 12 chr2 33536865 33537211 -219719372 - MSTD LTR MaLR 0 396 1 1558 163 19 49 chr2 33537457 33537782 -219718801 + L1MD3 LINE L1 6663 6977 -1018 2184 134 21 100 chr2 33537785 33538024 -219718559 + Tigger2a DNA MER2_type 1 257 -2451 2253 116 7 7 chr2 33538024 33538327 -219718256 - AluSg SINE Alu -7 303 1 2184 134 21 100 chr2 33538327 33538375 -219718208 + Tigger2a DNA MER2_type 257 307 -2401 1052 98 144 17 chr2 33538375 33538398 -219718185 - MER107 DNA MER1_type -1 196 177 217 0 61 0 chr2 33538398 33538431 -219718152 + (TTG)n Simple_repeat Simple_repeat 2 36 0 1052 98 144 17 chr2 33538431 33538581 -219718002 - MER107 DNA MER1_type -20 177 1 2184 134 21 100 chr2 33538581 33538763 -219717820 + Tigger2a DNA MER2_type 307 434 0 582 137 0 98 chr2 33538763 33538916 -219717667 + L1MC3 LINE L1 6964 7101 -684 341 211 66 0 chr2 33538922 33538998 -219717585 + MLT1F1 LTR MaLR 45 125 -442 426 216 10 0 chr2 33538998 33539095 -219717488 + L1MD3 LINE L1 7404 7501 -494 961 94 0 7 chr2 33539095 33539233 -219717350 - Tigger4(Zombi) DNA MER2_type 0 2731 2595 1157 177 26 17 chr2 33539727 33539959 -219716624 - AluSg/x SINE Alu -6 306 73 2241 113 3 3 chr2 33540147 33540448 -219716135 - AluSx SINE Alu -11 301 1 2215 127 0 10 chr2 33540551 33540865 -219715718 + AluSx SINE Alu 1 311 -1 2295 104 3 0 chr2 33541377 33541674 -219714909 + AluSx SINE Alu 1 298 -14 223 318 48 40 chr2 33541689 33541815 -219714768 - MIR3 SINE MIR -25 183 57 1608 182 43 10 chr2 33542264 33542566 -219714017 - AluJb SINE Alu 0 312 1 1397 184 131 28 chr2 33542619 33542978 -219713605 + MSTD LTR MaLR 1 396 0 5607 115 25 3 chr2 33543482 33543883 -219712700 - L1PA15 LINE L1 -2 6163 5772 2372 85 0 0 chr2 33543883 33544177 -219712406 - AluY SINE Alu -17 294 1 5607 115 25 3 chr2 33544177 33545238 -219711345 - L1PA15 LINE L1 -393 5772 4708 305 338 58 47 chr2 33545808 33546086 -219710497 - L1ME4a LINE L1 -137 5984 5704 228 258 26 58 chr2 33546173 33546328 -219710255 - HAL1 LINE L1 -133 2374 2225 1756 200 0 7 chr2 33546413 33546713 -219709870 - AluJo SINE Alu -14 298 1 1403 178 120 11 chr2 33546717 33546993 -219709590 - AluSx SINE Alu -6 306 1 322 251 60 42 chr2 33547347 33547562 -219709021 - HAL1 LINE L1 -877 1630 1412 669 226 154 24 chr2 33547577 33547785 -219708798 + MIR SINE MIR 22 256 -6 492 299 56 34 chr2 33548110 33548378 -219708205 - HAL1 LINE L1 -1409 1098 825 284 212 59 12 chr2 33549819 33549904 -219706679 - L1 LINE L1 -1246 4900 4812 183 261 261 72 chr2 33549957 33550068 -219706515 + L2 LINE L2 3182 3313 0 509 271 43 7 chr2 33550980 33551158 -219705425 - MLT1K LTR MaLR -5 610 419 1412 203 64 37 chr2 33551340 33551636 -219704947 - AluJo SINE Alu -7 305 2 401 281 129 22 chr2 33551636 33551767 -219704816 + MIR SINE MIR 114 262 0 196 276 52 0 chr2 33551763 33551821 -219704762 - MIR SINE MIR -108 154 94 * 544 252 116 13 chr2 33552193 33552348 -219704235 - MIR SINE MIR -89 173 3 649 163 15 0 chr2 33553409 33553544 -219703039 + CT-rich Low_complexity Low_complexity 3 139 0 761 188 12 59 chr2 33553545 33553715 -219702868 - AluJo SINE Alu -38 274 113 1885 213 98 48 chr2 33553947 33554529 -219702054 + Charlie1a DNA MER1_type 1 611 -844 2190 121 48 25 chr2 33554529 33554885 -219701698 - THE1B LTR MaLR 0 364 1 10322 83 3 5 chr2 33554885 33556467 -219700116 - THE1B-int LTR MaLR 0 1580 1 2274 106 48 31 chr2 33556467 33556825 -219699758 - THE1B LTR MaLR 0 364 1 2988 161 76 70 chr2 33556825 33557456 -219699127 + Charlie1a DNA MER1_type 607 1246 -1515 180 0 0 0 chr2 33557456 33557476 -219699107 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2988 161 76 70 chr2 33557476 33557687 -219698896 + Charlie1a DNA MER1_type 1246 1454 -1 2449 56 7 3 chr2 33557757 33558060 -219698523 - AluY SINE Alu -7 304 1 201 280 13 40 chr2 33558406 33558481 -219698102 + MIR SINE MIR 79 151 -57 219 69 0 0 chr2 33558716 33558745 -219697838 + (CA)n Simple_repeat Simple_repeat 2 30 0 2348 98 7 0 chr2 33560334 33560641 -219695942 - AluSx SINE Alu -3 309 1 2048 116 48 0 chr2 33560804 33561098 -219695485 - AluSg SINE Alu -2 308 1 1532 167 4 15 chr2 33561100 33561369 -219695214 - AluJb SINE Alu -17 295 30 25 31 0 0 chr2 33562331 33562363 -219694220 + AT_rich Low_complexity Low_complexity 1 32 0 358 200 200 0 chr2 33562424 33562529 -219694054 - L1MC4 LINE L1 -157 7885 7760 21 0 0 0 chr2 33563834 33563855 -219692728 + AT_rich Low_complexity Low_complexity 1 21 0 904 214 0 12 chr2 33563919 33564092 -219692491 - FAM SINE Alu -4 171 1 23 33 0 0 chr2 33564096 33564126 -219692457 + AT_rich Low_complexity Low_complexity 1 30 0 228 372 122 6 chr2 33564349 33564513 -219692070 - MIR3 SINE MIR -14 194 12 333 294 140 14 chr2 33564541 33564684 -219691899 - MIR SINE MIR 0 262 102 328 256 139 54 chr2 33565368 33565497 -219691086 + MIR3 SINE MIR 57 196 -12 21 0 0 0 chr2 33565828 33565849 -219690734 + AT_rich Low_complexity Low_complexity 1 21 0 1715 182 3 46 chr2 33567440 33567742 -219688841 + AluJb SINE Alu 1 289 -23 267 285 122 32 chr2 33567747 33567870 -219688713 - MIR3 SINE MIR -5 203 70 592 280 98 14 chr2 33567886 33568100 -219688483 + MIR SINE MIR 3 234 -28 2010 236 26 21 chr2 33568133 33568702 -219687881 + HsTC2 DNA Tc2 13 584 -1314 266 197 158 0 chr2 33568711 33568787 -219687796 + HsTC2 DNA Tc2 1811 1898 0 24 32 0 0 chr2 33569056 33569087 -219687496 + AT_rich Low_complexity Low_complexity 1 31 0 2243 95 0 0 chr2 33570355 33570674 -219685909 - AluSq SINE Alu 0 319 1 394 306 118 85 chr2 33570834 33571081 -219685502 + L2 LINE L2 2920 3182 -90 2090 101 16 36 chr2 33571081 33571389 -219685194 + AluSc SINE Alu 1 302 -7 394 306 118 85 chr2 33571389 33571481 -219685102 + L2 LINE L2 3182 3270 -2 22 0 0 0 chr2 33571770 33571792 -219684791 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 33572616 33572637 -219683946 + AT_rich Low_complexity Low_complexity 1 21 0 2172 102 6 26 chr2 33574488 33574801 -219681782 + AluSg SINE Alu 1 307 -3 417 213 97 39 chr2 33574878 33575033 -219681550 - MLT1K LTR MaLR -7 581 418 440 288 42 54 chr2 33575315 33575555 -219681028 + Charlie8 DNA MER1_type 3 239 -2178 2295 114 0 3 chr2 33575999 33576305 -219680278 + AluSq SINE Alu 1 305 -8 1893 161 58 6 chr2 33576990 33577337 -219679246 - MER47A DNA MER2_type 0 366 2 2505 213 60 5 chr2 33577537 33578396 -219678187 - L1M4 LINE L1 -2792 3852 2886 2346 96 0 0 chr2 33578406 33578707 -219677876 - AluSx SINE Alu -11 301 1 609 160 34 0 chr2 33578739 33578858 -219677725 - L1M4 LINE L1 -5346 1196 1074 1876 253 41 20 chr2 33578858 33579368 -219677215 - L1M4 LINE L1 -6012 530 10 245 367 19 19 chr2 33579396 33579554 -219677029 + MIR SINE MIR 48 205 -57 1988 288 32 14 chr2 33579666 33580260 -219676323 - MLT2E LTR ERVL -23 605 1 501 284 7 0 chr2 33580836 33580977 -219675606 - ERVL LTR ERVL -3223 2541 2400 474 65 0 0 chr2 33580978 33581040 -219675543 + (CA)n Simple_repeat Simple_repeat 1 62 0 735 326 67 54 chr2 33581388 33582368 -219674215 - ERVL LTR ERVL -3799 1965 973 270 233 0 0 chr2 33582570 33582630 -219673953 + L1MEc LINE L1 38 97 -6299 661 276 128 42 chr2 33582632 33583038 -219673545 - MLT1H1 LTR MaLR -1 554 114 301 267 40 0 chr2 33583047 33583148 -219673435 + L1MEc LINE L1 2058 2162 -4234 1964 126 10 39 chr2 33583149 33583459 -219673124 - AluSx SINE Alu -4 308 8 2246 91 6 31 chr2 33583503 33583822 -219672761 + AluSx SINE Alu 1 311 -1 10548 45 3 78 chr2 33583864 33585361 -219671222 - SVA Other Other -1 1385 1 893 177 0 6 chr2 33587172 33587330 -219669253 + Tigger1 DNA MER2_type 2 158 -2260 * 1078 109 86 52 chr2 33587318 33587411 -219669172 + Tigger1 DNA MER2_type 2202 2290 -128 2206 100 0 29 chr2 33587411 33587720 -219668863 - AluSq SINE Alu -12 301 2 1078 109 86 52 chr2 33587720 33587836 -219668747 + Tigger1 DNA MER2_type 2290 2418 0 231 333 0 0 chr2 33589021 33589087 -219667496 - MIR SINE MIR -2 260 195 211 326 0 0 chr2 33589078 33589121 -219667462 - MIR SINE MIR -197 65 23 * 377 88 73 0 chr2 33589128 33589196 -219667387 - L1MB2 LINE L1 0 6171 6099 834 160 46 0 chr2 33589196 33589327 -219667256 + FLAM_C SINE Alu 2 138 -5 2387 110 14 60 chr2 33589337 33589783 -219666800 - L1MB2 LINE L1 -61 6110 5686 967 173 14 24 chr2 33590062 33590270 -219666313 + MER20 DNA MER1_type 13 218 -1 1871 235 193 17 chr2 33590555 33591568 -219665015 + L2 LINE L2 2017 3213 -100 206 368 69 74 chr2 33591641 33591996 -219664587 - L2 LINE L2 -9 3263 2909 468 0 0 0 chr2 33591996 33592048 -219664535 + (TG)n Simple_repeat Simple_repeat 2 53 0 206 368 69 74 chr2 33592048 33592113 -219664470 - L2 LINE L2 -363 2909 2845 2410 78 0 34 chr2 33592339 33592659 -219663924 - AluSg SINE Alu -1 309 1 13699 125 19 25 chr2 33593958 33595881 -219660702 - Tigger1 DNA MER2_type 0 2418 508 792 199 0 0 chr2 33595881 33596057 -219660526 - L1MA6 LINE L1 -1 6299 6124 13699 125 19 25 chr2 33596057 33596456 -219660127 - Tigger1 DNA MER2_type -1910 508 108 1853 180 0 0 chr2 33596499 33596805 -219659778 - AluJb SINE Alu -6 306 1 316 179 73 24 chr2 33596811 33596934 -219659649 - L1MC5 LINE L1 -184 7777 7649 1314 208 51 10 chr2 33596937 33597163 -219659420 - MER114 LTR ERV -243 405 155 2816 16 0 6 chr2 33597163 33597480 -219659103 - AluYb8 SINE Alu -3 315 1 1314 208 51 10 chr2 33597480 33597642 -219658941 - MER114 LTR ERV -493 155 1 23 92 0 0 chr2 33597935 33598000 -219658583 + AT_rich Low_complexity Low_complexity 1 65 0 225 271 0 0 chr2 33598111 33598170 -219658413 - MER94 DNA DNA -72 62 4 266 300 166 50 chr2 33598660 33599396 -219657187 - L2 LINE L2 -961 2353 1533 690 287 100 13 chr2 33599905 33600135 -219656448 - MIR SINE MIR 0 262 13 262 278 153 49 chr2 33600864 33601008 -219655575 + MIR SINE MIR 94 252 -10 24 0 0 0 chr2 33601898 33601922 -219654661 + AT_rich Low_complexity Low_complexity 1 24 0 188 225 213 38 chr2 33601987 33602067 -219654516 + MIR3 SINE MIR 83 176 -32 1779 185 11 19 chr2 33602116 33602484 -219654099 + MER47A DNA MER2_type 1 365 -1 311 256 136 8 chr2 33602592 33602717 -219653866 - MIR3 SINE MIR -32 176 36 23 0 0 0 chr2 33602790 33602813 -219653770 + AT_rich Low_complexity Low_complexity 1 23 0 296 287 213 30 chr2 33603268 33603470 -219653113 + MIR SINE MIR 21 259 -3 639 182 67 125 chr2 33603640 33603897 -219652686 + MER33 DNA MER1_type 15 250 -2335 1912 143 24 0 chr2 33603897 33604184 -219652399 - AluSx SINE Alu -8 304 11 639 182 67 125 chr2 33604184 33604255 -219652328 + MER33 DNA MER1_type 250 324 0 21 0 0 0 chr2 33604762 33604783 -219651800 + AT_rich Low_complexity Low_complexity 1 21 0 2451 62 0 3 chr2 33604912 33605217 -219651366 - AluY SINE Alu -7 304 1 619 171 45 45 chr2 33605378 33605554 -219651029 - MER104 DNA MER2_type -1 179 4 2252 117 0 3 chr2 33606321 33606629 -219649954 - AluSx SINE Alu -5 307 1 1566 158 39 39 chr2 33607004 33607315 -219649268 + MER2 DNA MER2_type 3 313 -32 4623 175 36 42 chr2 33608037 33608661 -219647922 - L1MB8 LINE L1 -3 6175 5549 2155 129 3 0 chr2 33608661 33608971 -219647612 + AluSx SINE Alu 1 311 -1 4623 175 36 42 chr2 33608971 33610158 -219646425 - L1MB8 LINE L1 -629 5549 4378 2143 137 0 0 chr2 33610158 33610457 -219646126 - AluSx SINE Alu -11 301 3 4623 175 36 42 chr2 33610457 33610614 -219645969 - L1MB8 LINE L1 -1800 4378 4222 1604 177 17 10 chr2 33610614 33610914 -219645669 - MER65C LTR ERV1 -34 427 126 462 271 81 47 chr2 33610918 33611317 -219645266 - L1MEc LINE L1 -5213 995 636 727 181 0 0 chr2 33611347 33611463 -219645120 - FLAM_C SINE Alu -17 116 1 208 346 145 34 chr2 33612969 33613528 -219643055 - L2 LINE L2 -189 3083 2461 453 308 43 11 chr2 33614672 33614912 -219641671 - L1MEc LINE L1 -756 1820 1520 384 271 120 77 chr2 33615064 33615307 -219641276 - L1MEc LINE L1 -4905 1300 1036 2206 115 0 3 chr2 33615307 33615611 -219640972 - AluSc SINE Alu -6 303 1 384 271 120 77 chr2 33615611 33615718 -219640865 - L1MEc LINE L1 -5169 1036 935 1779 138 0 61 chr2 33615845 33616157 -219640426 - AluSx SINE Alu -19 293 1 185 182 0 0 chr2 33617229 33617262 -219639321 - L2 LINE L2 -1 3271 3239 397 132 0 0 chr2 33617472 33617553 -219639030 + AluS SINE Alu 228 308 0 257 188 0 0 chr2 33618028 33618076 -219638507 - MIR3 SINE MIR -6 202 155 493 264 9 0 chr2 33618635 33618745 -219637838 - MIR SINE MIR 0 262 152 1824 161 19 22 chr2 33619354 33619665 -219636918 + AluJb SINE Alu 1 310 -2 23 0 0 0 chr2 33620133 33620156 -219636427 + AT_rich Low_complexity Low_complexity 1 23 0 1333 158 65 47 chr2 33620156 33620478 -219636105 - L1MA7 LINE L1 -6 6285 5958 1033 178 66 12 chr2 33620468 33620710 -219635873 - L1 LINE L1 -1781 4365 4111 * 266 327 45 0 chr2 33620872 33620982 -219635601 - L1ME LINE L1 -385 5736 5622 372 294 112 20 chr2 33621107 33621304 -219635279 - MIR SINE MIR -7 255 41 1017 178 0 22 chr2 33621437 33621622 -219634961 + FRAM SINE Alu 1 176 0 824 179 27 68 chr2 33621635 33621868 -219634715 - L1ME2 LINE L1 -66 6098 5881 255 395 8 8 chr2 33622048 33622172 -219634411 - MIR SINE MIR -111 151 28 3814 108 14 56 chr2 33622877 33623251 -219633332 + L1M4c LINE L1 1497 1833 -4551 2272 95 0 0 chr2 33623251 33623536 -219633047 - AluSx SINE Alu -27 285 1 3814 108 14 56 chr2 33623536 33623818 -219632765 + L1M4c LINE L1 1833 2125 -4259 7770 213 24 22 chr2 33623820 33625244 -219631339 + L1 LINE L1 2875 4294 -2088 333 0 0 0 chr2 33625244 33625281 -219631302 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 1846 156 14 0 chr2 33625281 33625434 -219631149 - AluSx SINE Alu -32 280 120 333 0 0 0 chr2 33625434 33625471 -219631112 + (TTA)n Simple_repeat Simple_repeat 2 38 0 1846 156 14 0 chr2 33625471 33625593 -219630990 - AluSx SINE Alu -192 120 1 7770 213 24 22 chr2 33625593 33626098 -219630485 + L1 LINE L1 4293 4810 -1572 4050 178 44 44 chr2 33676122 33676239 -219580344 - L1M4 LINE L1 -512 5672 5557 2179 129 3 0 chr2 33676239 33676549 -219580034 + AluSx SINE Alu 1 311 -1 4050 178 44 44 chr2 33676549 33677727 -219578856 - L1M4 LINE L1 -627 5557 4377 2166 139 0 7 chr2 33677727 33678037 -219578546 - AluSx SINE Alu -4 308 1 4050 178 44 44 chr2 33678037 33678194 -219578389 - L1M4 LINE L1 -1807 4377 4222 1519 173 17 10 chr2 33678194 33678494 -219578089 - MER65C LTR ERV1 -34 427 126 410 267 81 47 chr2 33678498 33678897 -219577686 - L1MEc LINE L1 -5213 995 636 737 181 0 0 chr2 33678927 33679043 -219577540 - FLAM_C SINE Alu -17 116 1 219 346 145 34 chr2 33680549 33681108 -219575475 - L2 LINE L2 -189 3083 2461 391 284 38 16 chr2 33682252 33682492 -219574091 - L1MEc LINE L1 -756 1820 1520 384 271 120 77 chr2 33682644 33682887 -219573696 - L1MEc LINE L1 -4905 1300 1036 2233 115 0 3 chr2 33682887 33683191 -219573392 - AluSc SINE Alu -6 303 1 384 271 120 77 chr2 33683191 33683298 -219573285 - L1MEc LINE L1 -5169 1036 935 1792 141 0 61 chr2 33683425 33683738 -219572845 - AluSx SINE Alu -18 294 1 184 182 0 0 chr2 33684810 33684843 -219571740 - L2 LINE L2 -1 3271 3239 375 132 0 0 chr2 33685053 33685134 -219571449 + AluS SINE Alu 228 308 0 259 188 0 0 chr2 33685609 33685657 -219570926 - MIR3 SINE MIR -6 202 155 493 264 9 0 chr2 33686216 33686326 -219570257 - MIR SINE MIR 0 262 152 1827 165 19 23 chr2 33686935 33687244 -219569339 + AluJb SINE Alu 1 308 -4 23 0 0 0 chr2 33687717 33687740 -219568843 + AT_rich Low_complexity Low_complexity 1 23 0 1237 158 65 47 chr2 33687740 33688062 -219568521 - L1MA7 LINE L1 -6 6285 5958 964 178 66 12 chr2 33688052 33688294 -219568289 - L1 LINE L1 -1781 4365 4111 * 242 327 45 0 chr2 33688456 33688566 -219568017 - L1ME LINE L1 -385 5736 5622 367 294 112 20 chr2 33688691 33688888 -219567695 - MIR SINE MIR -7 255 41 1058 173 0 22 chr2 33689021 33689206 -219567377 + FRAM SINE Alu 1 176 0 760 177 21 68 chr2 33689219 33689452 -219567131 - L1ME2 LINE L1 -66 6098 5881 258 395 8 8 chr2 33689632 33689756 -219566827 - MIR SINE MIR -111 151 28 3746 109 12 31 chr2 33690461 33690819 -219565764 + L1MB3 LINE L1 1497 1839 -4545 2288 106 0 0 chr2 33690819 33691120 -219565463 - AluSx SINE Alu -11 301 1 3746 109 12 31 chr2 33691120 33691402 -219565181 + L1MB3 LINE L1 1839 2125 -4259 7277 214 24 23 chr2 33691404 33692829 -219563754 + L1 LINE L1 2875 4296 -2086 369 0 0 0 chr2 33692829 33692870 -219563713 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 1863 156 14 0 chr2 33692870 33693023 -219563560 - AluSx SINE Alu -32 280 120 279 0 0 0 chr2 33693023 33693054 -219563529 + (TTA)n Simple_repeat Simple_repeat 2 32 0 1863 156 14 0 chr2 33693054 33693176 -219563407 - AluSx SINE Alu -192 120 1 7277 214 24 23 chr2 33693176 33693698 -219562885 + L1 LINE L1 4295 4826 -1556 828 202 5 5 chr2 33693709 33693917 -219562666 + L1MB3 LINE L1 3491 3698 -2684 * 4958 164 20 40 chr2 33693904 33694188 -219562395 + L1MB3 LINE L1 4837 5125 -1294 2357 93 0 3 chr2 33694188 33694489 -219562094 + AluSx SINE Alu 1 300 -12 1492 199 7 21 chr2 33694489 33694775 -219561808 - AluJo SINE Alu -30 282 1 4958 164 20 40 chr2 33694775 33695422 -219561161 + L1MB3 LINE L1 5124 5782 -637 2270 88 20 0 chr2 33695422 33695718 -219560865 + AluY SINE Alu 1 302 -9 2378 62 0 7 chr2 33695719 33696037 -219560546 + AluY SINE Alu 1 316 0 4958 164 20 40 chr2 33696037 33696714 -219559869 + L1MB3 LINE L1 5781 6417 -2 765 173 89 129 chr2 33697229 33697481 -219559102 + MIR SINE MIR 4 241 -21 2170 96 20 3 chr2 33697482 33697775 -219558808 - AluSg SINE Alu -9 301 4 2302 115 0 6 chr2 33697783 33698097 -219558486 - AluSx SINE Alu 0 312 1 1163 192 147 34 chr2 33698494 33698910 -219557673 - MLT1C LTR MaLR -4 463 1 717 308 142 16 chr2 33699701 33700130 -219556453 + L2 LINE L2 1725 2207 -1107 2255 98 13 10 chr2 33701025 33701330 -219555253 + AluSx SINE Alu 1 306 -6 500 290 67 60 chr2 33701373 33701953 -219554630 + L1ME4a LINE L1 5363 5946 -175 534 263 121 18 chr2 33702376 33702600 -219553983 + MIR SINE MIR 5 251 -11 752 302 5 14 chr2 33702649 33702864 -219553719 + MIR SINE MIR 31 243 -19 1938 67 12 16 chr2 33703838 33704091 -219552492 + AluSc SINE Alu 43 294 -15 399 215 84 78 chr2 33704218 33704409 -219552174 - L1ME3A LINE L1 -3 6167 5976 394 251 132 74 chr2 33704530 33704977 -219551606 - HAL1 LINE L1 -9 2498 2026 219 350 154 36 chr2 33705127 33705226 -219551357 + L2 LINE L2 1993 2079 -1235 2304 101 3 7 chr2 33705226 33705532 -219551051 - AluSq SINE Alu -8 305 1 219 350 154 36 chr2 33705532 33705712 -219550871 + L2 LINE L2 2079 2305 -1009 302 252 76 76 chr2 33706574 33706693 -219549890 - L2 LINE L2 0 3272 3154 476 221 158 8 chr2 33706729 33706856 -219549727 + MER5A DNA MER1_type 4 149 -40 369 244 205 8 chr2 33706761 33706888 -219549695 - MER5A DNA MER1_type -24 165 14 * 2344 92 7 0 chr2 33707134 33707428 -219549155 + AluSg SINE Alu 1 296 -14 197 359 16 0 chr2 33707553 33707617 -219548966 - L2 LINE L2 -681 2633 2569 242 318 157 34 chr2 33707751 33708075 -219548508 - L2 LINE L2 -828 2486 2123 198 265 0 0 chr2 33710045 33710094 -219546489 - L2 LINE L2 -5 3267 3219 505 259 143 5 chr2 33710681 33710870 -219545713 + MIR SINE MIR 20 234 -28 2037 150 32 9 chr2 33711873 33712213 -219544370 + MER7A DNA MER2_type 1 346 0 2448 46 0 3 chr2 33712522 33712804 -219543779 - AluY SINE Alu 0 311 31 1830 145 34 30 chr2 33713333 33713629 -219542954 + AluJb SINE Alu 1 297 -15 605 222 99 12 chr2 33714413 33714575 -219542008 + FRAM SINE Alu 1 176 0 2204 112 0 10 chr2 33715073 33715369 -219541214 + AluSx SINE Alu 3 295 -17 265 254 151 0 chr2 33715574 33715700 -219540883 - MER113 DNA MER1_type? -345 176 32 264 252 89 59 chr2 33715785 33715920 -219540663 - MER5B DNA MER1_type -29 149 11 365 242 43 75 chr2 33717482 33717643 -219538940 - MARNA DNA Mariner -355 231 76 213 178 0 0 chr2 33719428 33719473 -219537110 + (TGGA)n Simple_repeat Simple_repeat 4 48 0 23 0 0 0 chr2 33719827 33719850 -219536733 + AT_rich Low_complexity Low_complexity 1 23 0 383 121 0 0 chr2 33720087 33720145 -219536438 + Alu SINE Alu 245 302 0 206 227 0 0 chr2 33720373 33720417 -219536166 - MIR SINE MIR -1 261 218 2506 72 0 7 chr2 33720712 33721017 -219535566 + AluSq SINE Alu 1 303 -10 222 37 0 0 chr2 33721017 33721044 -219535539 + (TA)n Simple_repeat Simple_repeat 2 28 0 948 78 78 0 chr2 33722104 33722233 -219534350 + MER85 DNA T2_type 1 139 0 210 313 76 23 chr2 33723014 33723145 -219533438 + MIR SINE MIR 75 212 -50 303 282 84 15 chr2 33723501 33723632 -219532951 + MIR3 SINE MIR 2 141 -67 195 100 0 0 chr2 33724014 33724044 -219532539 + (TC)n Simple_repeat Simple_repeat 2 31 0 315 0 0 0 chr2 33724044 33724079 -219532504 + (CA)n Simple_repeat Simple_repeat 1 35 0 401 221 76 19 chr2 33724200 33724358 -219532225 - L1ME4a LINE L1 -11 6110 5944 1816 249 97 14 chr2 33724420 33724934 -219531649 - MER115 DNA AcHobo 0 693 137 336 24 0 0 chr2 33725228 33725269 -219531314 + (TG)n Simple_repeat Simple_repeat 2 42 0 386 141 16 0 chr2 33725301 33725365 -219531218 - MER20 DNA MER1_type -11 208 144 1707 103 0 5 chr2 33725365 33725632 -219530951 - AluSc SINE Alu 0 323 58 283 182 0 0 chr2 33725653 33725697 -219530886 - MER20 DNA MER1_type -172 47 4 621 221 91 20 chr2 33725698 33725952 -219530631 + L1ME3A LINE L1 961 1232 -4887 602 218 39 57 chr2 33726030 33726137 -219530446 + L1ME3A LINE L1 4356 4463 -1666 391 141 26 13 chr2 33726137 33726215 -219530368 + L1MA5A LINE L1 6219 6297 0 602 218 39 57 chr2 33726215 33726387 -219530196 + L1ME3A LINE L1 4463 4630 -1499 5970 161 30 7 chr2 33726408 33728303 -219528280 + L1PA14 LINE L1 4222 6158 -3 1604 243 68 58 chr2 33728335 33728972 -219527611 + L1ME3A LINE L1 5303 5945 -208 1720 78 9 0 chr2 33730663 33730882 -219525701 - AluSp SINE Alu -1 312 92 1442 250 103 53 chr2 33730977 33731542 -219525041 + MLT1E LTR MaLR 1 593 0 1674 130 31 0 chr2 33732441 33732702 -219523881 + MSTB1 LTR MaLR 1 269 -163 913 132 0 15 chr2 33732702 33732838 -219523745 - FLAM_C SINE Alu -9 134 1 1156 139 0 6 chr2 33732838 33733010 -219523573 + MSTB1 LTR MaLR 262 432 0 252 206 15 29 chr2 33733010 33733078 -219523505 - MER103 DNA DNA -46 120 54 279 280 60 30 chr2 33733520 33733620 -219522963 - L2 LINE L2 -1 3312 3210 23 33 0 0 chr2 33733830 33733860 -219522723 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr2 33734042 33734070 -219522513 + AT_rich Low_complexity Low_complexity 1 28 0 298 248 111 20 chr2 33734381 33734534 -219522049 + MIR SINE MIR 20 186 -76 194 135 0 27 chr2 33735708 33735745 -219520838 + MER5B DNA MER1_type 18 53 -125 * 211 169 195 26 chr2 33735712 33735789 -219520794 - MER5A DNA MER1_type -21 168 79 956 238 19 0 chr2 33735918 33736124 -219520459 - MER63A DNA MER1_type 0 210 1 355 113 19 0 chr2 33737774 33737827 -219518756 + MER5A DNA MER1_type 14 67 -122 241 336 69 0 chr2 33738072 33738188 -219518395 + MIR SINE MIR 28 151 -111 714 248 48 17 chr2 33738203 33738433 -219518150 - MIR SINE MIR -18 244 8 1743 54 0 5 chr2 33738697 33738902 -219517681 - AluY SINE Alu -18 293 90 1853 116 55 68 chr2 33738905 33739285 -219517298 + THE1C LTR MaLR 1 375 0 219 167 21 21 chr2 33740199 33740247 -219516336 + (CCCCG)n Simple_repeat Simple_repeat 5 52 0 196 348 29 22 chr2 33741114 33741252 -219515331 + L3b LINE CR1 1165 1303 -280 2244 118 48 25 chr2 33741556 33741912 -219514671 + THE1B LTR MaLR 1 364 0 11153 78 17 72 chr2 33741912 33742293 -219514290 + THE1B-int LTR MaLR 1 401 -1179 606 117 0 0 chr2 33742293 33742387 -219514196 - AluSc SINE Alu -1 308 215 11153 78 17 72 chr2 33742387 33743584 -219512999 + THE1B-int LTR MaLR 401 1580 0 2316 110 48 25 chr2 33743584 33743940 -219512643 + THE1B LTR MaLR 1 364 0 2989 90 27 25 chr2 33744374 33744417 -219512166 - MLT2A1 LTR ERVL 0 444 403 609 100 0 0 chr2 33744417 33744507 -219512076 + (TA)n Simple_repeat Simple_repeat 2 91 0 2989 90 27 25 chr2 33744507 33744906 -219511677 - MLT2A1 LTR ERVL -41 403 1 2605 102 14 6 chr2 33745540 33745901 -219510682 + THE1B LTR MaLR 1 364 0 992 296 65 12 chr2 33746067 33746469 -219510114 + LTR16A LTR ERVL 1 423 -27 237 178 32 185 chr2 33746666 33746823 -219509760 - MLT1K LTR MaLR -2 586 454 1123 228 95 58 chr2 33747137 33747171 -219509412 - MLT2B1 LTR ERVL -6 514 483 216 0 0 0 chr2 33747171 33747195 -219509388 + (TG)n Simple_repeat Simple_repeat 2 25 0 1123 228 95 58 chr2 33747195 33747485 -219509098 - MLT2B1 LTR ERVL -37 483 178 850 225 38 0 chr2 33747517 33747730 -219508853 + L1M4 LINE L1 2572 2792 -3354 238 200 144 67 chr2 33747730 33747820 -219508763 - MLT1F LTR MaLR -443 99 3 2118 118 24 0 chr2 33749757 33750044 -219506539 - AluSx SINE Alu -18 294 1 225 179 0 0 chr2 33750345 33750384 -219506199 + MARNA DNA Mariner 199 237 -349 1830 110 26 71 chr2 33750647 33750957 -219505626 + AluSg SINE Alu 1 296 -14 297 241 11 11 chr2 33751157 33751244 -219505339 - ALR/Alpha Satellite centromeric -16 156 70 441 206 169 38 chr2 33752177 33752337 -219504246 - MER5A DNA MER1_type 0 189 9 243 262 49 0 chr2 33753438 33753499 -219503084 + MIR SINE MIR 28 91 -171 546 336 20 25 chr2 33753504 33753748 -219502835 + MIR SINE MIR 18 260 -2 506 241 89 35 chr2 33754725 33754928 -219501655 - L1ME3A LINE L1 -169 6001 5788 679 233 93 28 chr2 33755098 33755313 -219501270 + MIR SINE MIR 34 262 0 255 314 16 47 chr2 33755379 33755570 -219501013 + L2 LINE L2 2879 3063 -209 48 18 0 0 chr2 33755639 33755694 -219500889 + AT_rich Low_complexity Low_complexity 1 55 0 499 196 59 0 chr2 33755803 33755905 -219500678 + Charlie1a DNA MER1_type 93 200 -1255 555 99 0 12 chr2 33755907 33755988 -219500595 + AluSx SINE Alu 2 81 -232 733 95 0 0 chr2 33755988 33756083 -219500500 - LTR12 LTR ERV1 -8 706 612 323 191 34 22 chr2 33756083 33756172 -219500411 - LTR30 LTR ERV1 -80 642 553 1667 84 0 68 chr2 33756173 33756423 -219500160 - LTR12 LTR ERV1 -429 285 53 270 231 0 0 chr2 33756423 33756475 -219500108 - LTR30 LTR ERV1 -670 52 1 1747 116 0 4 chr2 33756475 33756717 -219499866 + AluSx SINE Alu 71 311 -1 2515 199 40 31 chr2 33756720 33757267 -219499316 + Charlie1a DNA MER1_type 192 743 -712 5191 138 40 60 chr2 33757314 33758017 -219498566 - L1MA7 LINE L1 -14 6277 5561 712 186 0 24 chr2 33758017 33758141 -219498442 + FLAM_A SINE Alu 1 121 -12 5191 138 40 60 chr2 33758141 33758473 -219498110 - L1MA7 LINE L1 -730 5561 5274 1691 181 20 13 chr2 33758473 33758777 -219497806 - AluJo SINE Alu -6 306 1 5191 138 40 60 chr2 33758777 33758972 -219497611 - L1MA7 LINE L1 -1017 5274 5077 2266 83 0 4 chr2 33759386 33759664 -219496919 + AluSc SINE Alu 1 277 -32 204 67 0 0 chr2 33759664 33759694 -219496889 + (CAAAA)n Simple_repeat Simple_repeat 5 34 0 696 231 24 52 chr2 33760028 33760266 -219496317 - L1MD3 LINE L1 -1 7994 6024 414 39 0 0 chr2 33760285 33760337 -219496246 + (TG)n Simple_repeat Simple_repeat 1 52 0 2159 104 4 0 chr2 33760337 33760615 -219495968 - AluSx SINE Alu -33 279 1 332 279 58 0 chr2 33760792 33760896 -219495687 + MIR SINE MIR 80 189 -73 982 287 102 18 chr2 33760947 33761365 -219495218 - LTR16A LTR ERVL 0 450 1 1843 170 7 0 chr2 33762294 33762582 -219494001 + AluJo SINE Alu 1 290 -22 464 291 108 24 chr2 33763181 33763394 -219493189 + MIR SINE MIR 32 262 0 1789 190 46 3 chr2 33763580 33763969 -219492614 + L1 LINE L1 4114 4519 -1627 387 0 0 0 chr2 33763969 33764012 -219492571 + (TCTCCC)n Simple_repeat Simple_repeat 6 48 0 309 298 32 0 chr2 33764021 33764145 -219492438 - L1M4 LINE L1 -2946 3200 3073 309 305 25 0 chr2 33764116 33764234 -219492349 - L1M4 LINE L1 -2953 3193 3073 1242 100 0 0 chr2 33764246 33764426 -219492157 + (T)n Simple_repeat Simple_repeat 1 180 0 7159 64 11 62 chr2 33765428 33767853 -219488730 + SVA Other Other 373 1386 0 5556 109 41 18 chr2 33767853 33768816 -219487767 + L1PA16 LINE L1 4508 5507 -659 2371 96 3 13 chr2 33768816 33769129 -219487454 + AluSx SINE Alu 1 310 -2 5556 109 41 18 chr2 33769129 33769796 -219486787 + L1PA16 LINE L1 5507 6157 -9 2276 94 0 0 chr2 33769814 33770102 -219486481 - AluSx SINE Alu -24 288 1 25 0 0 0 chr2 33770175 33770200 -219486383 + AT_rich Low_complexity Low_complexity 1 25 0 1667 202 104 60 chr2 33770349 33770493 -219486090 + MER114 LTR ERV 19 155 -493 2371 70 0 3 chr2 33770493 33770820 -219485763 + AluY SINE Alu 1 326 0 1667 202 104 60 chr2 33770820 33771169 -219485414 + MER114 LTR ERV 155 544 -104 802 226 0 63 chr2 33771169 33771278 -219485305 + MER45A DNA AcHobo 1 95 -1486 2075 131 0 0 chr2 33771278 33771569 -219485014 - AluSx SINE Alu -16 296 6 802 226 0 63 chr2 33771569 33771649 -219484934 + MER45A DNA AcHobo 95 178 0 1667 202 104 60 chr2 33771649 33771718 -219484865 + MER114 LTR ERV 544 608 -40 3568 90 45 4 chr2 33771747 33772236 -219484347 - MER75 DNA T2_type -5 509 1 2371 196 57 75 chr2 33772788 33772998 -219483585 + L1MA9 LINE L1 5455 5667 -636 2353 113 3 0 chr2 33772998 33773309 -219483274 + AluSx SINE Alu 1 312 0 2371 196 57 75 chr2 33773309 33773964 -219482619 + L1MA9 LINE L1 5667 6277 -26 693 138 41 0 chr2 33776406 33776529 -219480054 - L1MB4 LINE L1 0 6180 6053 6171 44 3 0 chr2 33777001 33777746 -219478837 + L1PA5 LINE L1 5401 6147 -7 2208 145 0 0 chr2 33777988 33778299 -219478284 - AluSx SINE Alu -1 311 1 2020 112 3 75 chr2 33778886 33779208 -219477375 - AluSx SINE Alu -13 299 1 379 241 74 18 chr2 33780676 33780879 -219475704 - MLT1L LTR MaLR 0 615 367 954 136 0 0 chr2 33781332 33781472 -219475111 - AluJ SINE Alu -15 297 158 636 135 58 0 chr2 33781473 33781577 -219475006 - AluJ SINE Alu -201 111 2 856 209 0 12 chr2 33781578 33781741 -219474842 - FRAM SINE Alu -2 164 4 382 305 8 0 chr2 33781757 33781875 -219474708 + L2 LINE L2 3195 3313 0 934 203 50 0 chr2 33781930 33781973 -219474610 + MIR SINE MIR 48 87 -175 1777 148 0 43 chr2 33781973 33782299 -219474284 - AluJb SINE Alu 0 312 1 934 203 50 0 chr2 33782299 33782457 -219474126 + MIR SINE MIR 87 259 -3 323 167 143 0 chr2 33782480 33782564 -219474019 + MIR SINE MIR 97 192 -70 237 292 69 56 chr2 33782690 33782834 -219473749 - MIR SINE MIR -75 187 42 4852 105 52 64 chr2 33782979 33783810 -219472773 - LTR12 LTR ERV1 -1 825 5 2494 192 37 24 chr2 33783825 33784420 -219472163 - pTR5 LTR ERV1 -1093 1345 743 5501 150 99 78 chr2 33784488 33785074 -219471509 + L1MC3 LINE L1 6494 7066 -719 252 263 38 12 chr2 33785074 33785154 -219471429 + MLT1F1 LTR MaLR 35 116 -451 5501 150 99 78 chr2 33785154 33785745 -219470838 + L1MC3 LINE L1 7066 7776 -9 1402 183 76 64 chr2 33785781 33785944 -219470639 + L1MEc LINE L1 2162 2321 -3894 2329 114 0 9 chr2 33785944 33786259 -219470324 + AluSx SINE Alu 1 312 0 1402 183 76 64 chr2 33786259 33786657 -219469926 + L1MEc LINE L1 2321 2687 -3528 1636 228 45 91 chr2 33786690 33787503 -219469080 - L1MEc LINE L1 -4050 2346 1575 1949 126 16 38 chr2 33787503 33787820 -219468763 + AluSx SINE Alu 1 310 -2 1636 228 45 91 chr2 33787820 33787882 -219468701 - L1MEc LINE L1 -4821 1575 1512 1499 155 41 48 chr2 33787944 33788235 -219468348 - AluJb SINE Alu 0 312 24 347 284 71 15 chr2 33788238 33788435 -219468148 - L1MEc LINE L1 -5098 1298 1091 4616 115 18 40 chr2 33788864 33789630 -219466953 + L1MA9 LINE L1 5559 6307 -5 401 222 0 0 chr2 33789963 33790044 -219466539 - MARNA DNA Mariner -16 570 490 326 333 63 0 chr2 33790062 33790221 -219466362 + MER117 DNA MER1_type 29 197 0 246 287 139 0 chr2 33790224 33790325 -219466258 + MIR SINE MIR 12 126 -136 247 263 62 25 chr2 33790425 33790505 -219466078 + MARNA DNA Mariner 84 166 -420 2347 171 9 119 chr2 33790553 33791132 -219465451 + MLT2B2 LTR ERVL 1 515 0 866 263 29 29 chr2 33791142 33791450 -219465133 + MARNA DNA Mariner 262 569 -17 1705 149 22 53 chr2 33791765 33792087 -219464496 + AluJo SINE Alu 1 312 0 388 308 105 0 chr2 33792248 33792381 -219464202 + MER115 DNA AcHobo 1 147 -546 1308 189 117 7 chr2 33792382 33792904 -219463679 + MLT1E1 LTR MaLR 1 638 -16 303 219 73 0 chr2 33792953 33793035 -219463548 + MER5C DNA MER1_type 37 124 -200 21 0 0 0 chr2 33793041 33793062 -219463521 + AT_rich Low_complexity Low_complexity 1 21 0 1475 281 29 56 chr2 33793127 33793679 -219462904 + MER115 DNA AcHobo 157 693 0 1390 157 73 76 chr2 33793886 33794357 -219462226 + MSTD LTR MaLR 15 396 0 2078 206 34 26 chr2 33794478 33794979 -219461604 + MLT1D LTR MaLR 1 505 0 210 322 66 44 chr2 33796486 33796669 -219459914 - MIR SINE MIR -70 192 6 29 0 0 0 chr2 33796911 33796940 -219459643 + AT_rich Low_complexity Low_complexity 1 29 0 1914 138 14 0 chr2 33796940 33797223 -219459360 - AluJb SINE Alu -25 287 1 817 146 110 12 chr2 33797231 33797395 -219459188 - L1MA2 LINE L1 0 6304 6125 315 223 50 0 chr2 33798780 33798886 -219457697 - MIR SINE MIR -66 196 85 392 328 16 0 chr2 33799356 33799484 -219457099 - MIR SINE MIR -126 136 7 561 255 25 12 chr2 33799606 33799767 -219456816 - MIR SINE MIR -70 192 30 627 198 0 0 chr2 33799770 33799881 -219456702 + FLAM_A SINE Alu 21 131 -11 517 103 10 31 chr2 33799881 33799978 -219456605 - Charlie5 DNA MER1_type -73 2539 2445 * 1191 184 40 32 chr2 33799977 33800227 -219456356 - Charlie5 DNA MER1_type -2346 266 15 2231 111 0 25 chr2 33800837 33800975 -219455608 + AluSg SINE Alu 1 141 -169 2207 95 0 48 chr2 33800975 33801291 -219455292 + AluSp SINE Alu 1 301 -12 2231 111 0 25 chr2 33801291 33801467 -219455116 + AluSg SINE Alu 141 307 -3 417 86 0 0 chr2 33803025 33803083 -219453500 + (GA)n Simple_repeat Simple_repeat 1 58 0 3201 178 31 12 chr2 33803265 33803671 -219452912 + L1M4 LINE L1 4668 5065 -1119 2084 142 0 0 chr2 33803671 33803974 -219452609 - AluSx SINE Alu -9 303 1 3201 178 31 12 chr2 33803974 33804675 -219451908 + L1M4 LINE L1 5065 5792 -392 1191 170 97 76 chr2 33804698 33804987 -219451596 - AluJb SINE Alu -7 295 1 1754 143 18 122 chr2 33804988 33805128 -219451455 - L1MB5 LINE L1 -137 6037 5884 207 114 0 0 chr2 33805128 33805163 -219451420 + (TG)n Simple_repeat Simple_repeat 2 36 0 1754 143 18 122 chr2 33805163 33805297 -219451286 - L1MB5 LINE L1 -290 5884 5822 450 0 0 0 chr2 33805297 33805347 -219451236 + (TA)n Simple_repeat Simple_repeat 2 51 0 1754 143 18 122 chr2 33805347 33805506 -219451077 - L1MB5 LINE L1 -352 5822 5648 237 311 67 43 chr2 33805620 33805784 -219450799 - MIR3 SINE MIR -2 206 39 228 227 125 0 chr2 33806020 33806108 -219450475 - MER102a DNA MER1_type -1 329 231 2146 134 0 0 chr2 33807273 33807572 -219449011 - AluSx SINE Alu -13 299 1 339 25 0 0 chr2 33809158 33809198 -219447385 + (TG)n Simple_repeat Simple_repeat 1 40 0 529 14 29 0 chr2 33809198 33809268 -219447315 + (TCTA)n Simple_repeat Simple_repeat 2 73 0 2288 96 0 43 chr2 33809361 33809562 -219447021 + AluSx SINE Alu 1 184 -128 2525 68 3 0 chr2 33809562 33809857 -219446726 - AluY SINE Alu -15 296 1 993 73 0 0 chr2 33809857 33809979 -219446604 + AluSg/x SINE Alu 189 310 -2 2288 96 0 43 chr2 33809857 33809979 -219446604 + AluSx SINE Alu 184 310 -2 967 292 80 41 chr2 33810194 33810323 -219446260 + L2 LINE L2 2460 2583 -730 2240 144 55 0 chr2 33810323 33810670 -219445913 - MER47A DNA MER2_type 0 366 1 967 292 80 41 chr2 33810670 33811117 -219445466 + L2 LINE L2 2583 3084 -229 2312 116 0 0 chr2 33811117 33811427 -219445156 - AluSq SINE Alu -3 310 1 967 292 80 41 chr2 33811427 33811666 -219444917 + L2 LINE L2 3084 3312 -1 244 323 40 91 chr2 33811671 33811828 -219444755 - L3 LINE CR1 -193 1384 1247 2239 100 0 23 chr2 33811828 33812129 -219444454 - AluSq SINE Alu -19 294 1 244 323 40 91 chr2 33812129 33812268 -219444315 - L3 LINE CR1 -330 1247 1103 180 0 0 0 chr2 33812271 33812291 -219444292 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2550 63 0 3 chr2 33812313 33812615 -219443968 + AluY SINE Alu 7 307 -4 317 330 18 9 chr2 33812772 33812881 -219443702 - L3 LINE CR1 -1432 145 36 30 0 0 0 chr2 33812889 33812919 -219443664 + AT_rich Low_complexity Low_complexity 1 30 0 848 163 26 18 chr2 33813094 33813481 -219443102 + CT-rich Low_complexity Low_complexity 1 390 0 1536 39 0 0 chr2 33813512 33813923 -219442660 + (G)n Simple_repeat Simple_repeat 1 411 0 22 0 0 0 chr2 33814958 33814980 -219441603 + AT_rich Low_complexity Low_complexity 1 22 0 227 286 7 38 chr2 33815013 33815214 -219441369 + A-rich Low_complexity Low_complexity 1 194 0 214 261 7 42 chr2 33815409 33815551 -219441032 + A-rich Low_complexity Low_complexity 2 138 0 267 300 0 0 chr2 33815593 33815693 -219440890 + A-rich Low_complexity Low_complexity 1 100 0 2266 89 3 3 chr2 33816827 33817118 -219439465 + AluSg SINE Alu 1 291 -19 2299 93 0 13 chr2 33817130 33817432 -219439151 - AluSx SINE Alu -14 298 1 248 333 133 7 chr2 33818246 33818381 -219438202 + MIR SINE MIR 2 153 -109 2085 103 20 33 chr2 33818514 33818816 -219437767 - AluSq SINE Alu -15 298 1 2118 141 7 0 chr2 33818817 33819123 -219437460 - AluSx SINE Alu -4 308 1 450 310 47 43 chr2 33819246 33819357 -219437226 + MIR SINE MIR 30 139 -123 2350 102 76 12 chr2 33819357 33819699 -219436884 - THE1B LTR MaLR 0 364 1 450 310 47 43 chr2 33819699 33819819 -219436764 + MIR SINE MIR 139 262 0 1005 82 0 0 chr2 33821232 33821354 -219435229 + AluSp SINE Alu 11 132 -181 2171 115 24 0 chr2 33821356 33821652 -219434931 + AluSp SINE Alu 1 303 -10 2298 121 0 10 chr2 33822223 33822537 -219434046 + AluSx SINE Alu 1 311 -1 994 216 28 18 chr2 33823465 33823683 -219432900 + MER58A DNA MER1_type 1 220 -4 212 270 61 61 chr2 33824504 33824700 -219431883 - L2 LINE L2 -188 3084 2889 205 268 54 0 chr2 33824705 33824761 -219431822 + (CAGAGA)n Simple_repeat Simple_repeat 2 60 0 220 289 141 33 chr2 33825489 33825610 -219430973 - L2 LINE L2 0 3272 3139 2064 126 7 7 chr2 33825828 33826130 -219430453 + AluSx SINE Alu 1 302 -10 545 213 192 25 chr2 33826447 33826687 -219429896 - L1ME4a LINE L1 -4 6117 5838 305 268 101 18 chr2 33827312 33827480 -219429103 - L1MDa LINE L1 -3855 2685 2504 300 53 0 0 chr2 33827743 33827781 -219428802 + (CA)n Simple_repeat Simple_repeat 1 38 0 270 275 147 32 chr2 33828011 33828320 -219428263 - L1MDa LINE L1 -800 2101 1663 21 71 0 0 chr2 33828646 33828688 -219427895 + AT_rich Low_complexity Low_complexity 1 42 0 969 231 5 0 chr2 33828698 33828884 -219427699 + MER58A DNA MER1_type 34 220 -4 977 268 114 82 chr2 33828894 33829663 -219426920 - L1MDa LINE L1 -5314 1216 423 262 254 0 0 chr2 33829780 33829843 -219426740 + MIR SINE MIR 17 79 -183 1087 189 51 32 chr2 33829856 33829897 -219426686 - MER58A DNA MER1_type -2199 221 182 1624 170 77 12 chr2 33829897 33830220 -219426363 + MER2 DNA MER2_type 1 344 0 1087 189 51 32 chr2 33830220 33830395 -219426188 - MER58A DNA MER1_type -2238 182 1 352 190 50 33 chr2 33830396 33830500 -219426083 + MIR SINE MIR 89 197 -65 3740 155 26 8 chr2 33830500 33831124 -219425459 + MER41B LTR ERV1 1 635 0 352 190 50 33 chr2 33831124 33831140 -219425443 + MIR SINE MIR 197 211 -51 812 245 62 29 chr2 33831298 33831571 -219425012 - MLT1I LTR MaLR -25 384 103 673 268 38 11 chr2 33831587 33831928 -219424655 + LTR16A LTR ERVL 52 440 -10 306 266 43 11 chr2 33832060 33832154 -219424429 - MIR SINE MIR -1 261 165 792 210 7 0 chr2 33832213 33832356 -219424227 + MER58B DNA MER1_type 198 341 0 3020 113 64 43 chr2 33832447 33832637 -219423946 + MER4D LTR ERV1 1 186 -593 2115 122 3 3 chr2 33832637 33832933 -219423650 + AluSp SINE Alu 1 296 -17 3020 113 64 43 chr2 33832933 33833511 -219423072 + MER4D LTR ERV1 186 779 0 249 304 0 0 chr2 33834211 33834267 -219422316 - MIR SINE MIR -192 70 15 1704 136 99 7 chr2 33834507 33834780 -219421803 - AluJb SINE Alu -12 300 3 903 139 0 0 chr2 33834784 33834921 -219421662 - L1PB4 LINE L1 -1 6155 6019 216 218 18 0 chr2 33834968 33835023 -219421560 + (TGAA)n Simple_repeat Simple_repeat 2 57 0 192 287 195 11 chr2 33835139 33835226 -219421357 - L2 LINE L2 -2 3270 3168 546 28 83 0 chr2 33836365 33836437 -219420146 - MADE1 DNA Mariner -2 78 1 2141 113 0 0 chr2 33836811 33837095 -219419488 + AluSx SINE Alu 1 284 -28 610 30 116 0 chr2 33837095 33837390 -219419193 + (TA)n Simple_repeat Simple_repeat 1 329 0 2466 72 0 0 chr2 33838171 33838462 -219418121 - AluSg SINE Alu -19 291 1 2136 99 0 51 chr2 33839016 33839328 -219417255 - AluSx SINE Alu -16 296 1 230 259 34 13 chr2 33839660 33839901 -219416682 + CT-rich Low_complexity Low_complexity 1 246 0 2165 131 3 6 chr2 33840782 33841094 -219415489 - AluSx SINE Alu -1 311 1 919 129 15 0 chr2 33841095 33841227 -219415356 - AluSq/x SINE Alu -179 134 1 249 57 0 0 chr2 33841239 33841274 -219415309 + (T)n Simple_repeat Simple_repeat 1 35 0 304 298 10 0 chr2 33841514 33841567 -219415016 - MIR SINE MIR -79 129 78 2532 75 53 8 chr2 33841567 33841926 -219414657 + THE1C LTR MaLR 1 375 0 304 298 10 0 chr2 33841926 33841976 -219414607 - MIR SINE MIR -130 78 25 770 126 0 0 chr2 33842638 33842749 -219413834 - HY1 scRNA scRNA -1 111 1 398 296 85 0 chr2 33842859 33843035 -219413548 - MIR3 SINE MIR -3 205 15 212 235 0 47 chr2 33844339 33844424 -219412159 + C-rich Low_complexity Low_complexity 2 82 0 21 89 0 0 chr2 33844566 33844622 -219411961 + GC_rich Low_complexity Low_complexity 1 56 0 189 0 0 0 chr2 33844919 33844940 -219411643 + (CCG)n Simple_repeat Simple_repeat 1 21 0 216 125 0 42 chr2 33845120 33845168 -219411415 + (CCCG)n Simple_repeat Simple_repeat 4 49 0 666 198 87 52 chr2 33847556 33847572 -219409011 + AluSg/x SINE Alu 120 134 -178 2260 103 13 7 chr2 33847572 33847873 -219408710 + AluSx SINE Alu 1 303 -9 666 198 87 52 chr2 33847873 33848028 -219408555 + AluSg/x SINE Alu 134 297 -15 373 272 40 39 chr2 33848817 33849010 -219407573 + MIR SINE MIR 2 191 -71 1781 161 2 99 chr2 33851568 33851991 -219404592 - MLT1B LTR MaLR -6 384 3 230 271 239 32 chr2 33852282 33852437 -219404146 - MER5A DNA MER1_type -2 187 1 23 54 0 0 chr2 33852777 33852814 -219403769 + AT_rich Low_complexity Low_complexity 1 37 0 22 35 0 0 chr2 33852925 33852954 -219403629 + AT_rich Low_complexity Low_complexity 1 29 0 8877 117 41 5 chr2 33853192 33854526 -219402057 - Tigger1 DNA MER2_type 0 2418 1037 3893 140 32 2 chr2 33854524 33855115 -219401468 - Tigger1 DNA MER2_type -1809 609 1 * 335 316 22 61 chr2 33855367 33855598 -219400985 + MIR SINE MIR 2 223 -39 383 165 25 0 chr2 33856839 33856918 -219399665 + (TATATG)n Simple_repeat Simple_repeat 2 82 0 2176 125 0 0 chr2 33856919 33857214 -219399369 - AluSx SINE Alu -13 299 5 182 329 49 12 chr2 33857414 33857496 -219399087 + MIR SINE MIR 67 151 -111 188 182 0 73 chr2 33857587 33857642 -219398941 + L2 LINE L2 3171 3221 -92 339 25 0 0 chr2 33857696 33857736 -219398847 + (TGAA)n Simple_repeat Simple_repeat 2 41 0 289 330 165 0 chr2 33857997 33858173 -219398410 - L2 LINE L2 -252 3061 2857 21 36 0 0 chr2 33858725 33858753 -219397830 + AT_rich Low_complexity Low_complexity 1 28 0 2444 80 3 0 chr2 33858961 33859260 -219397323 + AluSq SINE Alu 1 300 -13 744 204 87 0 chr2 33860067 33860239 -219396344 + MER5A DNA MER1_type 3 189 0 1886 149 0 21 chr2 33860520 33860808 -219395775 - AluJo SINE Alu -30 282 1 418 292 45 17 chr2 33860990 33861168 -219395415 + MER5A DNA MER1_type 7 189 0 22 80 0 0 chr2 33862024 33862074 -219394509 + AT_rich Low_complexity Low_complexity 1 50 0 2170 77 11 0 chr2 33862088 33862362 -219394221 + AluSc SINE Alu 31 307 -2 6180 226 46 21 chr2 33862480 33865277 -219391306 - L1MC1 LINE L1 -2 6400 3676 216 0 0 0 chr2 33865277 33865301 -219391282 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1563 166 12 4 chr2 33865307 33865560 -219391023 - AluSx SINE Alu -54 258 4 6180 226 46 21 chr2 33865560 33866011 -219390572 - L1MC1 LINE L1 -2730 3672 2161 1070 178 0 0 chr2 33866013 33866193 -219390390 - AluJb SINE Alu -4 308 129 2250 84 3 36 chr2 33866215 33866523 -219390060 - AluSx SINE Alu -14 298 1 387 0 0 0 chr2 33866527 33866570 -219390013 + (TG)n Simple_repeat Simple_repeat 2 44 0 13391 198 30 14 chr2 33866581 33868300 -219388283 - L1PA15 LINE L1 -13 6152 4462 375 41 0 0 chr2 33868300 33868349 -219388234 + (TG)n Simple_repeat Simple_repeat 2 50 0 13391 198 30 14 chr2 33868349 33869875 -219386708 - L1PA15 LINE L1 -1703 4462 2839 2032 151 58 28 chr2 33869875 33870239 -219386344 + THE1C LTR MaLR 1 375 0 13391 198 30 14 chr2 33870239 33870704 -219385879 - L1PA15 LINE L1 -3326 2839 2383 6927 111 23 13 chr2 33870739 33871926 -219384657 - L1MA1 LINE L1 0 7721 6520 4829 218 24 25 chr2 33871930 33873716 -219382867 - L1PA13 LINE L1 -3755 3829 2018 306 321 43 52 chr2 33874863 33875190 -219381393 - L1PA13 LINE L1 -7202 379 56 * 11102 150 42 23 chr2 33875168 33878601 -219377982 - L1MA1 LINE L1 -1647 5937 2478 1350 160 15 46 chr2 33878625 33878887 -219377696 - L1MCa LINE L1 -6167 259 6 2481 112 77 0 chr2 33878917 33879255 -219377328 + THE1B LTR MaLR 1 364 0 11608 92 35 26 chr2 33879255 33880820 -219375763 + THE1B-int LTR MaLR 1 1580 0 2682 118 3 6 chr2 33880820 33881185 -219375398 + THE1B LTR MaLR 1 364 0 215 292 62 0 chr2 33881694 33881759 -219374824 + L3b LINE CR1 1429 1497 -86 206 278 0 19 chr2 33881828 33881882 -219374701 - MIR SINE MIR -61 147 95 2255 64 3 37 chr2 33881937 33882262 -219374321 + AluSx SINE Alu 1 315 0 492 283 14 0 chr2 33882565 33882710 -219373873 - MIR SINE MIR -14 248 102 250 204 0 0 chr2 33882971 33883020 -219373563 - L2 LINE L2 -1 3312 3264 276 160 0 20 chr2 33883344 33883394 -219373189 + L2 LINE L2 3264 3312 -1 1036 281 42 85 chr2 33883668 33883810 -219372773 - MLT1K LTR MaLR -15 573 427 866 208 6 44 chr2 33883810 33883993 -219372590 - MER45A DNA AcHobo -2 176 1 1036 281 42 85 chr2 33883993 33884391 -219372192 - MLT1K LTR MaLR -161 427 56 237 267 89 40 chr2 33884800 33884901 -219371682 + MIR SINE MIR 33 138 -70 1490 225 97 36 chr2 33885109 33885575 -219371008 + MLT1D LTR MaLR 12 505 0 912 185 201 6 chr2 33886444 33886768 -219369815 - LTR37A LTR ERV1 0 426 40 634 250 199 9 chr2 33887038 33887254 -219369329 + MIR SINE MIR 6 262 0 956 147 0 0 chr2 33887273 33887409 -219369174 + FRAM SINE Alu 18 153 -23 379 346 21 56 chr2 33889010 33889244 -219367339 - L3 LINE CR1 -23 1554 1329 235 256 139 111 chr2 33889395 33889739 -219366844 - L2 LINE L2 -8 3264 2911 308 254 52 57 chr2 33891018 33891181 -219365402 - MIR3 SINE MIR -8 200 37 360 0 0 0 chr2 33891267 33891307 -219365276 + (TG)n Simple_repeat Simple_repeat 2 41 0 931 254 37 16 chr2 33891514 33891758 -219364825 - MIR SINE MIR -3 259 11 2451 81 0 0 chr2 33891767 33892064 -219364519 - AluSp SINE Alu -16 297 1 495 226 50 83 chr2 33892069 33892205 -219364378 + MER5B DNA MER1_type 2 132 -46 1656 199 24 0 chr2 33892205 33892492 -219364091 + AluJo SINE Alu 1 294 -18 495 226 50 83 chr2 33892492 33892536 -219364047 + MER5B DNA MER1_type 132 176 -2 401 223 254 0 chr2 33892571 33892701 -219363882 - MER5A DNA MER1_type 0 189 27 2370 74 0 26 chr2 33892797 33893108 -219363475 + AluY SINE Alu 1 303 -8 352 261 118 0 chr2 33893120 33893239 -219363344 - MIR SINE MIR -26 236 104 2206 150 33 25 chr2 33893415 33893775 -219362808 - MLT1A1 LTR MaLR -2 363 1 357 247 22 11 chr2 33893778 33893867 -219362716 - L2 LINE L2 -1 3271 3182 410 226 122 37 chr2 33893978 33894142 -219362441 - MIR SINE MIR -83 179 2 2184 103 0 0 chr2 33894177 33894482 -219362101 - AluSx SINE Alu 0 305 1 1717 182 24 0 chr2 33894526 33894823 -219361760 + AluJo SINE Alu 1 304 -8 445 313 66 24 chr2 33895359 33895525 -219361058 + MER5A DNA MER1_type 14 186 -3 2516 75 7 0 chr2 33895533 33895840 -219360743 + AluSc SINE Alu 1 309 0 1185 221 75 31 chr2 33895885 33896234 -219360349 + MLT1A2 LTR MaLR 9 372 -2 883 143 119 0 chr2 33896247 33896415 -219360168 + MER5A DNA MER1_type 1 188 -1 483 212 30 0 chr2 33896423 33896522 -219360061 + MER5A DNA MER1_type 3 104 -85 226 328 34 42 chr2 33896579 33896698 -219359885 + MER5B DNA MER1_type 2 119 -59 470 85 0 4 chr2 33896907 33897119 -219359464 + AluSg SINE Alu 1 289 -21 439 264 86 40 chr2 33897242 33897416 -219359167 - MER5A DNA MER1_type 0 189 8 270 322 44 0 chr2 33897451 33897541 -219359042 - MER5A DNA MER1_type -26 163 70 1890 131 89 145 chr2 33897548 33898030 -219358553 + LTR32 LTR ERVL 15 469 -2 1013 211 11 0 chr2 33898577 33898762 -219357821 - MER5A DNA MER1_type -2 187 1 195 69 0 0 chr2 33899961 33899990 -219356593 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1982 134 0 0 chr2 33899998 33900275 -219356308 - AluSx SINE Alu -35 277 1 406 326 0 57 chr2 33900657 33900798 -219355785 - MIR SINE MIR -115 147 15 221 348 18 9 chr2 33900805 33900917 -219355666 + L3 LINE CR1 1113 1225 -352 2472 136 46 35 chr2 33901011 33901445 -219355138 + MER65A LTR ERV1 3 441 -4 187 245 96 53 chr2 33901447 33901541 -219355042 + L3 LINE CR1 1368 1465 -112 419 100 75 0 chr2 33901707 33901787 -219354796 - L1MB8 LINE L1 0 6178 6093 1877 118 78 4 chr2 33901810 33902081 -219354502 + AluSx SINE Alu 1 291 -21 261 0 0 0 chr2 33902084 33902113 -219354470 + (TA)n Simple_repeat Simple_repeat 2 30 0 1169 245 136 45 chr2 33902447 33902892 -219353691 - MLT1G1 LTR MaLR -8 546 82 1979 127 38 0 chr2 33902892 33903184 -219353399 - AluSq SINE Alu -10 303 1 1169 245 136 45 chr2 33903184 33903262 -219353321 - MLT1G1 LTR MaLR -472 82 13 594 167 0 11 chr2 33903429 33903519 -219353064 - AluS SINE Alu -223 90 2 2253 106 7 3 chr2 33903679 33903980 -219352603 - AluSx SINE Alu -10 302 1 957 92 0 0 chr2 33904374 33904493 -219352090 - AluSx SINE Alu -24 286 168 690 83 0 0 chr2 33904493 33904577 -219352006 - AluSx SINE Alu -227 85 2 565 262 131 34 chr2 33905062 33905299 -219351284 - MIR SINE MIR 0 262 3 247 282 51 64 chr2 33905741 33905897 -219350686 - L1ME4a LINE L1 -14 6107 5954 1798 278 167 24 chr2 33905924 33906605 -219349978 - L2 LINE L2 -52 3261 2679 1740 213 108 16 chr2 33906605 33907033 -219349550 + MLT1C LTR MaLR 1 467 0 1798 278 167 24 chr2 33907033 33907597 -219348986 - L2 LINE L2 -634 2679 1823 295 256 84 89 chr2 33907597 33907642 -219348941 - L1ME4a LINE L1 -250 5871 5827 2302 95 6 15 chr2 33907642 33907968 -219348615 + L1MA4A LINE L1 5978 6300 -3 295 256 84 89 chr2 33907968 33908019 -219348564 - L1ME4a LINE L1 -294 5827 5777 2389 88 0 0 chr2 33908019 33908315 -219348268 - AluSc SINE Alu -13 296 1 295 256 84 89 chr2 33908315 33908408 -219348175 - L1ME4a LINE L1 -344 5777 5682 241 227 59 84 chr2 33908442 33908561 -219348022 - L1ME4a LINE L1 -509 5612 5497 2450 141 40 5 chr2 33908621 33908996 -219347587 + MLT1B LTR MaLR 3 390 0 21 36 0 0 chr2 33909081 33909109 -219347474 + AT_rich Low_complexity Low_complexity 1 28 0 307 298 39 112 chr2 33909238 33909523 -219347060 + L2 LINE L2 3007 3270 -2 249 343 133 7 chr2 33909853 33909996 -219346587 + L2 LINE L2 3111 3271 -1 236 182 0 23 chr2 33910462 33910506 -219346077 - L1ME LINE L1 -527 5594 5552 25 0 0 0 chr2 33910729 33910754 -219345829 + AT_rich Low_complexity Low_complexity 1 25 0 412 143 0 0 chr2 33912292 33912355 -219344228 - FLAM SINE Alu -11 132 70 2527 128 39 17 chr2 33912945 33913360 -219343223 - MSTA LTR MaLR -4 424 1 961 167 6 17 chr2 33913724 33913898 -219342685 - MER5B DNA MER1_type -6 172 1 25 0 0 0 chr2 33914001 33914026 -219342557 + AT_rich Low_complexity Low_complexity 1 25 0 2138 133 20 0 chr2 33914038 33914339 -219342244 + AluSx SINE Alu 1 307 -5 660 216 144 12 chr2 33914649 33914816 -219341767 - MER5A DNA MER1_type 0 189 1 2127 64 0 0 chr2 33914903 33915180 -219341403 - AluY SINE Alu 0 310 34 2084 139 7 0 chr2 33916623 33916932 -219339651 - AluSx SINE Alu -1 311 1 1536 154 53 53 chr2 33917010 33917309 -219339274 - AluJb SINE Alu -11 301 3 233 236 63 94 chr2 33917455 33917582 -219339001 + MIR3 SINE MIR 73 195 -13 26 0 0 0 chr2 33917672 33917698 -219338885 + AT_rich Low_complexity Low_complexity 1 26 0 673 269 70 18 chr2 33917808 33918035 -219338548 + MIR SINE MIR 8 246 -16 243 259 0 47 chr2 33919531 33919616 -219336967 + T-rich Low_complexity Low_complexity 5 85 0 1049 271 4 0 chr2 33919730 33919970 -219336613 - MIR SINE MIR -4 258 18 1962 190 12 0 chr2 33919973 33920304 -219336279 - MER58B DNA MER1_type -1 340 6 852 262 106 67 chr2 33921370 33921775 -219334808 - L2 LINE L2 -2 3311 2891 2483 199 95 17 chr2 33922077 33922601 -219333982 - MLT1F1 LTR MaLR -2 565 1 1025 221 86 51 chr2 33922740 33923170 -219333413 + L1MC5 LINE L1 7473 7917 -44 1132 246 117 32 chr2 33924092 33924495 -219332088 - L1ME3A LINE L1 -13 6140 5704 1709 150 13 17 chr2 33924496 33924796 -219331787 - L1MA9 LINE L1 0 6312 6014 2267 87 3 10 chr2 33924852 33925151 -219331432 + AluSc SINE Alu 1 297 -12 287 298 64 0 chr2 33925590 33925684 -219330899 - MIR SINE MIR 0 262 163 1337 101 0 0 chr2 33925685 33925854 -219330729 + AluSg SINE Alu 1 169 -141 2221 116 0 0 chr2 33926494 33926796 -219329787 + AluSx SINE Alu 3 304 -8 291 304 11 11 chr2 33926909 33927001 -219329582 - MIR SINE MIR -100 108 17 376 252 69 38 chr2 33928163 33928322 -219328261 - L1ME3A LINE L1 -2386 5405 5242 265 286 0 0 chr2 33928698 33928761 -219327822 - L2 LINE L2 0 3313 3251 26 0 0 0 chr2 33929939 33929965 -219326618 + AT_rich Low_complexity Low_complexity 1 26 0 234 260 0 0 chr2 33930387 33930437 -219326146 - L2 LINE L2 -8 3305 3256 435 226 111 69 chr2 33933335 33933424 -219323159 - L1ME3A LINE L1 -231 5939 5855 861 162 20 66 chr2 33933424 33933622 -219322961 - MER5A DNA MER1_type 0 189 1 435 226 111 69 chr2 33933622 33933754 -219322829 - L1ME3A LINE L1 -315 5855 5703 2334 100 0 0 chr2 33933754 33934055 -219322528 - AluSx SINE Alu -11 301 1 435 226 111 69 chr2 33934055 33934093 -219322490 - L1ME3A LINE L1 -467 5703 5668 448 229 132 14 chr2 33934109 33934253 -219322330 - MER112 DNA MER1_type -98 162 2 285 268 136 92 chr2 33934318 33934635 -219321948 - L1ME3A LINE L1 -1085 5044 4714 844 306 92 63 chr2 33934678 33935011 -219321572 - L1ME3A LINE L1 -5124 995 673 1699 199 0 7 chr2 33935011 33935317 -219321266 - AluJo SINE Alu -8 304 1 844 306 92 63 chr2 33935317 33935949 -219320634 - L1ME3A LINE L1 -5446 673 2 313 279 121 36 chr2 33938282 33938422 -219318161 - MIR SINE MIR -80 182 31 2369 94 3 0 chr2 33938570 33938879 -219317704 - AluSg SINE Alu 0 310 1 337 322 85 0 chr2 33938949 33939067 -219317516 - L2 LINE L2 -1 3271 3144 1324 208 33 42 chr2 33939119 33939514 -219317069 - L1ME3A LINE L1 -492 5678 5288 24183 78 3 3 chr2 33941426 33945324 -219311259 - L1PA7 LINE L1 0 6154 2241 2589 224 135 20 chr2 33946086 33946995 -219309588 + Charlie7 DNA MER1_type 1487 2500 -112 186 206 29 0 chr2 33947041 33947075 -219309508 - MIR3 SINE MIR -22 186 152 1868 147 0 17 chr2 33947128 33947427 -219309156 - AluJo SINE Alu -4 308 15 279 79 0 0 chr2 33947428 33947466 -219309117 + (T)n Simple_repeat Simple_repeat 1 38 0 350 335 13 33 chr2 33947928 33948035 -219308548 + MIR SINE MIR 5 110 -152 2299 77 32 0 chr2 33948035 33948320 -219308263 - AluSg SINE Alu -16 294 1 350 335 13 33 chr2 33948320 33948364 -219308219 + MIR SINE MIR 110 153 -109 1574 211 3 3 chr2 33948433 33948731 -219307852 + AluJo SINE Alu 2 299 -13 594 228 122 5 chr2 33949953 33950150 -219306433 - L1MC3 LINE L1 -672 7113 6894 2171 110 14 3 chr2 33950177 33950468 -219306115 - AluSx SINE Alu -18 294 1 1631 104 59 66 chr2 33950468 33950757 -219305826 - L1MC1 LINE L1 -4 6329 6043 488 127 0 0 chr2 33950759 33950838 -219305745 + pTR5 LTR ERV1 741 819 -1619 * 21573 75 5 8 chr2 33950831 33953626 -219302957 - HERV9 LTR ERV1 -4367 4032 1246 6319 94 135 75 chr2 33953825 33955291 -219301292 - pTR5 LTR ERV1 0 2438 741 240 132 0 0 chr2 33955292 33955330 -219301253 - L1MC1 LINE L1 -294 6039 6002 278 330 19 10 chr2 33955614 33955717 -219300866 - MIR3 SINE MIR -13 195 92 210 71 0 0 chr2 33957815 33957843 -219298740 + (TG)n Simple_repeat Simple_repeat 2 29 0 261 0 0 0 chr2 33957949 33957978 -219298605 + (TG)n Simple_repeat Simple_repeat 2 30 0 23 33 0 0 chr2 33958172 33958202 -219298381 + AT_rich Low_complexity Low_complexity 1 30 0 3452 224 58 28 chr2 33958632 33959974 -219296609 - L1ME2 LINE L1 -10 6154 4774 561 155 21 21 chr2 33959974 33960071 -219296512 - Tigger7 DNA MER2_type 0 2491 2395 1060 155 48 138 chr2 33960074 33960364 -219296219 - Tigger7 DNA MER2_type -2223 264 1 559 260 15 32 chr2 33960366 33960568 -219296015 - L1ME2 LINE L1 -1373 4773 4578 1771 167 98 9 chr2 33960576 33960995 -219295588 + Charlie1b DNA MER1_type 68 523 0 2007 245 84 80 chr2 33960995 33961148 -219295435 - L1ME2 LINE L1 -1566 4580 4429 2286 109 0 3 chr2 33961148 33961450 -219295133 - AluSg SINE Alu -9 301 1 2007 245 84 80 chr2 33961450 33961609 -219294974 - L1ME2 LINE L1 -1717 4429 4272 2362 244 38 10 chr2 33961609 33962113 -219294470 - LTR40a LTR ERVL 0 519 2 2007 245 84 80 chr2 33962113 33962577 -219294006 - L1ME2 LINE L1 -1874 4272 3794 1544 187 26 0 chr2 33962577 33962845 -219293738 + AluJo SINE Alu 6 280 -32 2007 245 84 80 chr2 33962845 33963210 -219293373 - L1ME2 LINE L1 -2352 3794 3432 374 265 108 32 chr2 33963316 33963501 -219293082 - L1 LINE L1 -821 5325 5127 3062 207 26 32 chr2 33963527 33964213 -219292370 + Cheshire DNA MER1_type 176 857 -1563 1593 130 8 28 chr2 33964214 33964468 -219292115 + AluJo SINE Alu 33 281 -31 3117 180 34 17 chr2 33964469 33964785 -219291798 + Cheshire DNA MER1_type 1476 1785 -635 1930 177 33 6 chr2 33964785 33965118 -219291465 - MER2 DNA MER2_type -2 342 1 3117 180 34 17 chr2 33965118 33965451 -219291132 + Cheshire DNA MER1_type 1785 2136 -284 574 139 0 0 chr2 33965476 33965562 -219291021 - L1MC/D LINE L1 -564 5678 5593 2113 165 20 28 chr2 33965562 33965957 -219290626 - L1MC1 LINE L1 0 6333 5942 1327 177 47 11 chr2 33965957 33966234 -219290349 + MER58D DNA MER1_type 100 386 0 294 296 112 8 chr2 33968131 33968256 -219288327 + MIR3 SINE MIR 34 171 -37 240 237 68 84 chr2 33968256 33968424 -219288159 - MER5A DNA MER1_type 0 189 2 849 246 94 79 chr2 33968477 33968807 -219287776 - MLT1F1 LTR MaLR -207 360 1 478 260 49 0 chr2 33968916 33969039 -219287544 - MLT1I LTR MaLR -10 399 271 448 230 0 11 chr2 33969048 33969135 -219287448 - MLT1I LTR MaLR -96 313 228 3263 139 100 129 chr2 33969178 33970056 -219286527 - MER21A LTR ERV1 -77 854 2 813 254 80 14 chr2 33970066 33970279 -219286304 - MLT1I LTR MaLR -175 234 8 2146 130 3 0 chr2 33970916 33971217 -219285366 - AluSx SINE Alu -3 309 8 2082 114 13 32 chr2 33971752 33971885 -219284698 + AluSx SINE Alu 1 135 -177 2473 74 0 3 chr2 33971885 33972194 -219284389 + AluY SINE Alu 1 308 -3 2082 114 13 32 chr2 33972194 33972391 -219284192 + AluSx SINE Alu 135 312 0 3140 131 65 48 chr2 33973381 33973839 -219282744 - LTR59 LTR ERV1 -5 592 120 2323 82 0 7 chr2 33973839 33974130 -219282453 - AluSc SINE Alu -18 291 3 3140 131 65 48 chr2 33974130 33974253 -219282330 - LTR59 LTR ERV1 -477 120 1 2678 132 44 2 chr2 33974613 33975023 -219281560 - MSTA LTR MaLR -1 427 1 1850 75 0 0 chr2 33976115 33976373 -219280210 - AluSc SINE Alu 0 339 82 195 309 41 31 chr2 33976469 33976566 -219280017 - L2 LINE L2 -44 3269 3172 2076 117 0 3 chr2 33977315 33977621 -219278962 - AluSx SINE Alu 0 309 5 1719 215 52 34 chr2 33978160 33978644 -219277939 - MER39 LTR ERV1 -1 706 1 302 322 0 0 chr2 33978644 33978731 -219277852 + (CATA)n Simple_repeat Simple_repeat 2 88 0 1687 174 116 25 chr2 33978932 33978974 -219277609 + MSTD LTR MaLR 1 38 -358 2786 83 16 16 chr2 33978974 33979349 -219277234 + THE1C LTR MaLR 1 375 0 1687 174 116 25 chr2 33979349 33979669 -219276914 + MSTD LTR MaLR 38 396 0 2129 83 83 3 chr2 33979734 33980022 -219276561 - AluY SINE Alu 0 311 1 1188 242 117 42 chr2 33982195 33982624 -219273959 + MLT1C LTR MaLR 7 467 0 643 278 90 18 chr2 33982849 33983072 -219273511 - MIR SINE MIR -16 246 8 313 209 0 30 chr2 33983354 33983421 -219273162 - MIR SINE MIR -11 251 187 30 0 0 0 chr2 33984167 33984197 -219272386 + AT_rich Low_complexity Low_complexity 1 30 0 1344 194 92 7 chr2 33984382 33984665 -219271918 - AluJo SINE Alu -5 307 1 2434 81 0 0 chr2 33985469 33985767 -219270816 + AluSg SINE Alu 1 298 -12 493 214 86 0 chr2 33985875 33985992 -219270591 + L2 LINE L2 3187 3313 0 26 30 0 0 chr2 33986111 33986144 -219270439 + AT_rich Low_complexity Low_complexity 1 33 0 2452 99 0 0 chr2 33986171 33986483 -219270100 + AluSx SINE Alu 1 312 0 1128 179 10 5 chr2 33986685 33986886 -219269697 + MER20 DNA MER1_type 18 219 0 650 313 61 4 chr2 33987768 33987991 -219268592 - MIR SINE MIR -11 251 18 221 245 0 19 chr2 33988442 33988495 -219268088 + (TG)n Simple_repeat Simple_repeat 1 52 0 249 330 43 64 chr2 33988626 33988814 -219267769 - MIR3 SINE MIR -9 199 16 193 273 0 0 chr2 33988844 33988888 -219267695 + L2 LINE L2 3226 3269 -3 197 302 139 23 chr2 33989279 33989365 -219267218 + MIR SINE MIR 71 166 -96 282 56 0 0 chr2 33989477 33989513 -219267070 + (CA)n Simple_repeat Simple_repeat 1 36 0 254 241 17 0 chr2 33990903 33990961 -219265622 + (TA)n Simple_repeat Simple_repeat 2 60 0 195 42 0 0 chr2 33991108 33991132 -219265451 + (CAT)n Simple_repeat Simple_repeat 2 25 0 25 0 0 0 chr2 33991604 33991629 -219264954 + AT_rich Low_complexity Low_complexity 1 25 0 438 246 8 23 chr2 33991699 33991821 -219264762 + MIR3 SINE MIR 68 187 -21 858 245 96 42 chr2 33992475 33993076 -219263507 + L1ME LINE L1 34 860 -5210 1567 299 31 11 chr2 33993077 33993715 -219262868 + L1ME LINE L1 972 1622 -4639 679 170 0 52 chr2 33994075 33994210 -219262373 + FLAM_A SINE Alu 14 141 -1 271 233 87 68 chr2 33994622 33994725 -219261858 - Charlie7 DNA MER1_type -2507 105 1 269 312 78 37 chr2 33994916 33995211 -219261372 - L1ME4a LINE L1 -106 6015 5709 * 355 280 104 53 chr2 33995030 33995607 -219260976 - L1MA6 LINE L1 -402 5898 5286 2041 105 10 27 chr2 33995740 33996036 -219260547 - AluSx SINE Alu -21 291 1 237 339 35 17 chr2 33996826 33996941 -219259642 - MIR3 SINE MIR -23 185 69 2825 181 57 25 chr2 33997830 33998428 -219258155 - L1MB4 LINE L1 -6 6174 5558 1050 188 24 24 chr2 33999525 33999738 -219256845 - MER20 DNA MER1_type -6 213 1 255 199 39 55 chr2 34000037 34000218 -219256365 + (TATG)n Simple_repeat Simple_repeat 1 178 0 321 173 33 53 chr2 34000251 34000401 -219256182 + (TATG)n Simple_repeat Simple_repeat 3 149 0 273 192 51 45 chr2 34000413 34000590 -219255993 + (TATG)n Simple_repeat Simple_repeat 1 178 0 262 197 41 48 chr2 34000625 34000772 -219255811 + (TATG)n Simple_repeat Simple_repeat 4 149 0 381 22 0 0 chr2 34000884 34000930 -219255653 + (TG)n Simple_repeat Simple_repeat 2 47 0 8755 115 17 52 chr2 34002456 34002739 -219253844 - Tigger1 DNA MER2_type -1 2417 2126 1956 133 14 0 chr2 34002739 34003017 -219253566 - AluSx SINE Alu -17 295 14 8755 115 17 52 chr2 34003017 34004172 -219252411 - Tigger1 DNA MER2_type -292 2126 1030 692 220 58 93 chr2 34004345 34004604 -219251979 - MER112 DNA MER1_type -3 257 8 193 250 0 0 chr2 34007149 34007193 -219249390 - MIR SINE MIR -125 137 94 960 153 0 7 chr2 34007399 34007543 -219249040 - FRAM SINE Alu -24 152 10 201 363 21 58 chr2 34010341 34010531 -219246052 + L3 LINE CR1 62 244 -1333 976 98 0 55 chr2 34011021 34011185 -219245398 - L1MB7 LINE L1 -320 5864 5710 1869 126 0 4 chr2 34011185 34011439 -219245144 - AluSx SINE Alu -59 253 1 347 179 214 0 chr2 34011537 34011621 -219244962 - MER58 DNA MER1_type -1 2419 2318 326 267 69 30 chr2 34011623 34011724 -219244859 - MER58 DNA MER1_type -110 105 1 1306 109 14 19 chr2 34012132 34012342 -219244241 + L1MB7 LINE L1 5585 5793 -391 459 185 0 0 chr2 34012342 34012434 -219244149 + (CA)n Simple_repeat Simple_repeat 1 92 0 1969 150 34 40 chr2 34012434 34012814 -219243769 + L1MB7 LINE L1 5788 6165 -19 225 83 0 0 chr2 34015488 34015524 -219241059 + (A)n Simple_repeat Simple_repeat 1 36 0 2258 92 3 7 chr2 34016850 34017154 -219239429 - AluY SINE Alu -8 303 1 231 279 15 0 chr2 34017420 34017488 -219239095 + (TATG)n Simple_repeat Simple_repeat 3 71 0 4961 74 13 11 chr2 34017488 34018123 -219238460 - L1PA14 LINE L1 -2 6159 5524 216 0 0 0 chr2 34018457 34018481 -219238102 + (T)n Simple_repeat Simple_repeat 1 24 0 327 259 36 39 chr2 34019384 34019530 -219237053 + MLT1H LTR MaLR 79 233 -182 260 267 0 0 chr2 34021055 34021115 -219235468 - MIR SINE MIR -12 250 191 22 56 0 0 chr2 34021294 34021330 -219235253 + AT_rich Low_complexity Low_complexity 1 36 0 2283 108 0 3 chr2 34021424 34021720 -219234863 + AluSx SINE Alu 1 295 -17 236 370 22 29 chr2 34022245 34022383 -219234200 + MIR SINE MIR 120 256 -6 2278 217 63 47 chr2 34022806 34022848 -219233735 - MLT1F1 LTR MaLR 0 567 527 2348 81 3 0 chr2 34022848 34023143 -219233440 + AluSg SINE Alu 1 296 -14 2278 217 63 47 chr2 34023143 34023535 -219233048 - MLT1F1 LTR MaLR -40 527 120 823 180 8 0 chr2 34023535 34023663 -219232920 - FLAM_C SINE Alu -2 131 3 2278 217 63 47 chr2 34023663 34023785 -219232798 - MLT1F1 LTR MaLR -447 120 1 22 35 0 0 chr2 34029008 34029037 -219227546 + AT_rich Low_complexity Low_complexity 1 29 0 726 182 29 53 chr2 34029702 34029872 -219226711 + MER58B DNA MER1_type 173 338 -3 978 245 94 18 chr2 34030170 34030456 -219226127 + L3 LINE CR1 1257 1564 -13 845 209 0 0 chr2 34030924 34031063 -219225520 - MER58A DNA MER1_type 0 139 1 203 265 147 59 chr2 34031063 34031199 -219225384 - MIR3 SINE MIR -13 195 48 5604 79 34 53 chr2 34031765 34032958 -219223625 - SVA Other Other -518 868 62 1184 43 0 12 chr2 34032958 34033122 -219223461 + (GGGAGA)n Simple_repeat Simple_repeat 1 162 0 5604 79 34 53 chr2 34033122 34033183 -219223400 - SVA Other Other -1324 62 1 3411 127 12 14 chr2 34033472 34033984 -219222599 + MER9 LTR ERVK 1 511 0 1122 245 61 32 chr2 34034957 34035430 -219221153 + L1M4 LINE L1 3268 3754 -2392 1695 101 4 0 chr2 34035430 34035658 -219220925 + AluSq SINE Alu 1 229 -84 233 214 54 36 chr2 34036246 34036302 -219220281 - MER2 DNA MER2_type -3 342 286 486 0 0 0 chr2 34036337 34036391 -219220192 + (TA)n Simple_repeat Simple_repeat 1 54 0 3079 12 0 0 chr2 34037496 34037834 -219218749 - L1PA2 LINE L1 -376 5779 5442 2983 12 9 3 chr2 34037827 34038167 -219218416 + L1PA2 LINE L1 5794 6135 -20 * 1040 172 82 43 chr2 34038267 34038523 -219218060 - Tigger1 DNA MER2_type -2152 266 1 716 253 62 80 chr2 34038533 34038597 -219217986 - L1MC5 LINE L1 -204 7757 7693 2095 99 17 13 chr2 34038597 34038899 -219217684 + AluSx SINE Alu 2 304 -8 716 253 62 80 chr2 34038899 34038983 -219217600 - L1MC5 LINE L1 -268 7693 7609 2253 150 84 11 chr2 34038983 34039350 -219217233 + MSTD LTR MaLR 3 396 0 716 253 62 80 chr2 34039350 34039780 -219216803 - L1MC5 LINE L1 -352 7609 7246 1164 144 6 6 chr2 34041991 34042172 -219214411 - AluSq SINE Alu -12 301 121 12520 131 36 17 chr2 34042349 34042434 -219214149 + Tigger1 DNA MER2_type 387 469 -1949 2166 78 3 7 chr2 34042434 34042747 -219213836 - AluY SINE Alu 0 312 1 12520 131 36 17 chr2 34042747 34044653 -219211930 + Tigger1 DNA MER2_type 469 2418 0 10668 31 0 0 chr2 34046593 34047869 -219208714 - L1P LINE L1 -2228 3918 2643 * 11082 27 0 0 chr2 34047865 34049142 -219207441 + L1P LINE L1 3919 5195 -951 214 213 0 21 chr2 34049735 34049782 -219206801 + T-rich Low_complexity Low_complexity 4 49 0 626 275 23 18 chr2 34051352 34051523 -219205060 + MIR3 SINE MIR 30 201 -7 955 192 88 26 chr2 34052457 34052650 -219203933 - MER58A DNA MER1_type -3 221 17 288 0 0 0 chr2 34052759 34052791 -219203792 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 245 314 66 36 chr2 34052818 34052955 -219203628 - MIR3 SINE MIR -65 143 3 2875 7 0 0 chr2 34053913 34054222 -219202361 - AluY SINE Alu -2 309 1 30 0 0 0 chr2 34055704 34055734 -219200849 + AT_rich Low_complexity Low_complexity 1 30 0 2321 82 17 3 chr2 34055734 34056028 -219200555 - AluSq SINE Alu -15 298 1 405 223 96 0 chr2 34056088 34056182 -219200401 - L2 LINE L2 -2 3311 3209 717 130 73 0 chr2 34056206 34056329 -219200254 + L1MB2 LINE L1 5839 5970 -201 1611 165 8 0 chr2 34056447 34056713 -219199870 - L1M3 LINE L1 -437 5743 5476 3034 125 31 4 chr2 34056754 34057108 -219199475 - L1PB1 LINE L1 -2 6149 5779 495 0 0 0 chr2 34057108 34057163 -219199420 + (TG)n Simple_repeat Simple_repeat 2 56 0 3034 125 31 4 chr2 34057163 34057263 -219199320 - L1PB1 LINE L1 -372 5779 5683 3233 124 8 2 chr2 34057264 34057895 -219198688 + L1PB1 LINE L1 5053 5686 -465 984 116 30 50 chr2 34057890 34058089 -219198494 - L1M3 LINE L1 -689 5491 5297 * 385 263 147 39 chr2 34058159 34058315 -219198268 + MIR3 SINE MIR 31 203 -5 469 233 81 18 chr2 34059184 34059459 -219197124 + LTR33 LTR ERVL 154 520 -1 708 280 107 36 chr2 34059737 34060063 -219196520 - L1MC4a LINE L1 -1894 5914 5553 1873 157 0 0 chr2 34060063 34060364 -219196219 + AluSx SINE Alu 1 301 0 708 280 107 36 chr2 34060364 34060429 -219196154 - L1MC4a LINE L1 -2255 5553 5494 195 42 0 0 chr2 34060432 34060456 -219196127 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1198 118 0 24 chr2 34060480 34060650 -219195933 - AluSg SINE Alu -144 166 1 734 192 51 6 chr2 34060757 34060913 -219195670 - MER20 DNA MER1_type 0 219 57 21 0 0 0 chr2 34061059 34061080 -219195503 + AT_rich Low_complexity Low_complexity 1 21 0 655 248 38 17 chr2 34061312 34061548 -219195035 - MIR SINE MIR 0 262 22 345 145 65 0 chr2 34061778 34061840 -219194743 + MIR SINE MIR 126 191 -71 555 228 83 21 chr2 34062737 34062882 -219193701 - MIR3 SINE MIR -21 187 34 2166 121 20 3 chr2 34063143 34063449 -219193134 + AluSq SINE Alu 1 311 -2 9505 28 4 0 chr2 34064185 34066043 -219190540 + L1PA3 LINE L1 4292 6152 -3 21 57 0 0 chr2 34066043 34066078 -219190505 + AT_rich Low_complexity Low_complexity 1 35 0 2268 85 3 0 chr2 34066108 34066402 -219190181 - AluY SINE Alu -16 295 1 21 0 0 0 chr2 34066411 34066432 -219190151 + AT_rich Low_complexity Low_complexity 1 21 0 836 282 45 20 chr2 34066786 34067031 -219189552 - MIR SINE MIR -4 258 8 248 222 153 0 chr2 34067088 34067160 -219189423 + L2 LINE L2 3188 3270 -2 310 268 79 79 chr2 34067160 34067245 -219189338 + L1ME LINE L1 5655 5742 -379 1967 146 0 56 chr2 34067245 34067568 -219189015 + AluSx SINE Alu 1 305 -7 310 268 79 79 chr2 34067568 34067646 -219188937 + L1ME LINE L1 5741 5818 -303 212 345 0 12 chr2 34067904 34067988 -219188595 - MIR3 SINE MIR -16 192 110 833 165 0 0 chr2 34068785 34068918 -219187665 - FLAM_C SINE Alu 0 133 1 1371 125 60 0 chr2 34068969 34069185 -219187398 - MER30 DNA MER1_type 0 230 2 397 353 55 5 chr2 34069820 34070038 -219186545 + L2 LINE L2 2837 3065 -248 1890 149 7 13 chr2 34070332 34070633 -219185950 - AluSx SINE Alu -13 299 1 2438 80 0 0 chr2 34072257 34072557 -219184026 + AluY SINE Alu 1 300 -11 336 24 0 0 chr2 34072564 34072576 -219184007 + (CA)n Simple_repeat Simple_repeat 1 53 0 336 24 0 0 chr2 34072576 34072617 -219183966 + (CA)n Simple_repeat Simple_repeat 2 42 0 1264 180 144 8 chr2 34072694 34073089 -219183494 - Tigger6 DNA MER2_type -72 1525 1077 * 2335 184 5 2 chr2 34073086 34073521 -219183062 - Tigger6 DNA MER2_type -1161 436 1 195 102 41 102 chr2 34073672 34073721 -219182862 + L2 LINE L2 2448 2493 -821 192 383 90 31 chr2 34073872 34074360 -219182223 + L2 LINE L2 2458 2974 -340 361 324 64 73 chr2 34074685 34075093 -219181490 - L2 LINE L2 -42 3230 2827 594 312 205 29 chr2 34075206 34075860 -219180723 - L2 LINE L2 -916 2398 1630 737 59 29 0 chr2 34076137 34076239 -219180344 - L1MA2 LINE L1 0 6304 6200 242 333 0 0 chr2 34076240 34076297 -219180286 - L2 LINE L2 -12 3301 3245 224 295 48 57 chr2 34077227 34077332 -219179251 - L2 LINE L2 -37 3235 3132 268 265 193 0 chr2 34077376 34077459 -219179124 + MIR3 SINE MIR 99 197 -11 2361 84 0 19 chr2 34078015 34078324 -219178259 + AluSq SINE Alu 1 303 -10 1890 135 11 0 chr2 34078760 34079042 -219177541 - AluSx SINE Alu -27 285 1 368 359 38 5 chr2 34079877 34080061 -219176522 + MIR SINE MIR 30 219 -43 2041 120 3 32 chr2 34080113 34080429 -219176154 - AluSg1 SINE Alu -2 307 1 23 0 0 0 chr2 34080572 34080595 -219175988 + AT_rich Low_complexity Low_complexity 1 23 0 1696 160 10 14 chr2 34081852 34082145 -219174438 - AluJb SINE Alu -20 292 1 372 231 22 22 chr2 34082343 34082477 -219174106 + L1MA4A LINE L1 5989 6122 -181 371 239 11 0 chr2 34082480 34082572 -219174011 + L1MA4A LINE L1 6188 6280 -23 2510 84 0 3 chr2 34082935 34083246 -219173337 + AluSg SINE Alu 1 310 0 221 329 88 52 chr2 34083976 34084283 -219172300 - L2 LINE L2 -554 2760 2443 418 337 73 11 chr2 34084314 34084492 -219172091 - MIR3 SINE MIR -2 206 18 306 307 8 63 chr2 34086243 34086370 -219170213 - L2 LINE L2 -14 3299 3180 1873 142 3 63 chr2 34086963 34087295 -219169288 + AluJo SINE Alu 1 312 0 32021 35 2 3 chr2 34088879 34092956 -219163627 + L1PA3 LINE L1 1 4076 -2070 4844 31 0 2 chr2 34093056 34093632 -219162951 + L1PA3 LINE L1 5581 6155 0 351 0 0 0 chr2 34094013 34094052 -219162531 + (CA)n Simple_repeat Simple_repeat 2 40 0 23 0 0 0 chr2 34096225 34096248 -219160335 + AT_rich Low_complexity Low_complexity 1 23 0 241 290 87 22 chr2 34096346 34096484 -219160099 + MARNA DNA Mariner 354 500 -86 1116 162 0 12 chr2 34096561 34096734 -219159849 - FRAM SINE Alu -5 171 1 266 299 28 28 chr2 34096921 34097028 -219159555 + MIR3 SINE MIR 92 198 -10 24 0 0 0 chr2 34097271 34097295 -219159288 + AT_rich Low_complexity Low_complexity 1 24 0 1094 245 45 48 chr2 34097684 34098059 -219158524 + MLT1B LTR MaLR 1 374 -16 2475 66 3 0 chr2 34098449 34098751 -219157832 + AluY SINE Alu 1 303 -8 218 386 95 16 chr2 34100680 34100855 -219155728 - MIR3 SINE MIR -3 205 13 2386 72 0 16 chr2 34100855 34101162 -219155421 - AluSx SINE Alu -10 302 1 218 386 95 16 chr2 34101162 34101175 -219155408 - MIR3 SINE MIR -195 13 2 309 360 47 0 chr2 34101846 34101996 -219154587 - MIR SINE MIR -53 209 53 23 33 0 0 chr2 34103024 34103054 -219153529 + AT_rich Low_complexity Low_complexity 1 30 0 371 308 103 14 chr2 34103277 34103423 -219153160 + MER91A DNA MER1_type 22 180 -16 321 292 84 26 chr2 34103450 34103604 -219152979 - MIR3 SINE MIR -45 163 1 180 229 115 16 chr2 34103737 34103798 -219152785 - L3 LINE CR1 -77 1500 1434 235 311 250 22 chr2 34104508 34104712 -219151871 - L3 LINE CR1 -6 1571 1415 1170 204 22 0 chr2 34104712 34104943 -219151640 + MER46A DNA MER2_type 1 236 0 235 311 250 22 chr2 34104943 34105098 -219151485 - L3 LINE CR1 -162 1415 1130 186 43 0 0 chr2 34107129 34107152 -219149431 + (TAA)n Simple_repeat Simple_repeat 3 25 0 254 362 190 9 chr2 34107155 34107376 -219149207 - MIR SINE MIR 0 262 2 2293 88 10 3 chr2 34107695 34108001 -219148582 - AluSc SINE Alu -1 308 1 2243 114 0 0 chr2 34110388 34110685 -219145898 - AluSq SINE Alu -16 297 1 197 286 0 20 chr2 34111417 34111466 -219145117 + MIR SINE MIR 32 79 -183 232 277 130 57 chr2 34113163 34113340 -219143243 - MIR SINE MIR -20 242 53 362 250 125 8 chr2 34113592 34113712 -219142871 + MER94 DNA DNA 1 134 0 375 320 125 0 chr2 34114696 34114824 -219141759 - MIR3 SINE MIR -33 175 32 285 289 280 18 chr2 34115644 34115862 -219140721 + L3 LINE CR1 978 1252 -325 450 376 9 19 chr2 34116041 34116254 -219140329 - L3 LINE CR1 0 1577 1367 451 273 125 31 chr2 34116492 34116917 -219139666 - L1MEd LINE L1 -2567 3815 3351 3141 119 80 16 chr2 34117111 34117322 -219139261 - L1MA5A LINE L1 0 6297 6101 2074 125 57 20 chr2 34117322 34117673 -219138910 - THE1B LTR MaLR 0 364 1 3141 119 80 16 chr2 34117673 34118024 -219138559 - L1MA5A LINE L1 -196 6101 5699 302 194 21 21 chr2 34118046 34118139 -219138444 - L1MEd LINE L1 -3235 3147 3055 338 210 21 61 chr2 34118177 34118335 -219138248 - L1MEd LINE L1 -3882 2500 2376 787 217 82 98 chr2 34118342 34118835 -219137748 - MER66A LTR ERV1 -12 487 100 1932 143 34 0 chr2 34119019 34119312 -219137271 - AluSx SINE Alu -9 303 1 2356 85 7 7 chr2 34119785 34120090 -219136493 - AluSc SINE Alu -4 305 1 570 290 48 35 chr2 34120260 34120491 -219136092 - MIR SINE MIR -26 236 3 554 260 136 6 chr2 34120503 34120680 -219135903 - MIR SINE MIR -6 256 57 2274 113 0 3 chr2 34120686 34120987 -219135596 - AluSc SINE Alu -9 300 1 1946 147 3 17 chr2 34121176 34121475 -219135108 + AluJo SINE Alu 1 295 -17 211 211 0 0 chr2 34121475 34121513 -219135070 + GA-rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr2 34121553 34121576 -219135007 + AT_rich Low_complexity Low_complexity 1 23 0 2078 169 8 72 chr2 34123866 34124363 -219132220 - MER31B LTR ERV1 0 466 2 413 161 22 3 chr2 34124599 34124738 -219131845 - MER53 DNA DNA -3 186 8 274 262 132 16 chr2 34124795 34125141 -219131442 - L1MEd LINE L1 -4730 1833 1290 480 311 67 18 chr2 34125173 34125398 -219131185 - L1MEd LINE L1 -5020 1352 1117 221 186 51 0 chr2 34125803 34125862 -219130721 + (TTTA)n Simple_repeat Simple_repeat 4 65 0 189 74 0 0 chr2 34125943 34125970 -219130613 + (TG)n Simple_repeat Simple_repeat 2 28 0 231 122 0 41 chr2 34126039 34126088 -219130495 - L1ME LINE L1 -248 5916 5870 301 119 0 0 chr2 34126351 34126393 -219130190 - 5S rRNA rRNA -79 42 1 3118 69 2 0 chr2 34126393 34126830 -219129753 + L1PA7 LINE L1 4323 4760 -1386 7234 46 3 4 chr2 34126833 34128050 -219128533 + L1PA7 LINE L1 4936 6151 -3 372 235 66 7 chr2 34129444 34129580 -219127003 - Charlie2a DNA MER1_type 0 2862 2719 * 485 219 55 7 chr2 34129578 34129724 -219126859 - Charlie2a DNA MER1_type -1189 1673 1521 628 278 36 46 chr2 34129748 34130050 -219126533 - Charlie2a DNA MER1_type -2466 316 18 445 331 26 0 chr2 34130545 34130696 -219125887 - MIR3 SINE MIR -9 199 45 249 136 0 0 chr2 34131062 34131106 -219125477 + MER116 DNA Mariner 1 44 -36 1921 118 0 51 chr2 34131642 34131974 -219124609 + AluSx SINE Alu 1 317 0 528 229 13 51 chr2 34132630 34132678 -219123905 + L1ME3 LINE L1 5996 6044 -118 2623 52 0 0 chr2 34132678 34132985 -219123598 - AluY SINE Alu -4 307 1 528 229 13 51 chr2 34132985 34133093 -219123490 + L1ME3 LINE L1 6044 6146 -16 191 285 93 65 chr2 34134976 34135299 -219121284 + L2 LINE L2 2155 2486 -828 364 300 109 9 chr2 34136037 34136147 -219120436 + L2 LINE L2 3189 3309 -4 339 208 188 0 chr2 34137303 34137399 -219119184 - FLAM_A SINE Alu -7 126 13 258 32 0 0 chr2 34137518 34137549 -219119034 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 2176 127 0 3 chr2 34137549 34137837 -219118746 - AluSp SINE Alu -24 289 1 321 68 0 0 chr2 34139121 34139165 -219117418 + (CA)n Simple_repeat Simple_repeat 1 44 0 360 308 101 13 chr2 34139924 34140083 -219116500 - MIR SINE MIR -69 193 21 1104 203 33 0 chr2 34140087 34140299 -219116284 + MER58A DNA MER1_type 1 219 -5 691 204 188 6 chr2 34140312 34140488 -219116095 + MER3 DNA MER1_type 2 209 0 831 310 16 4 chr2 34140851 34141096 -219115487 - MIR SINE MIR 0 262 15 2452 80 0 0 chr2 34141244 34141544 -219115039 - AluSx SINE Alu -12 300 1 565 55 44 22 chr2 34141890 34141981 -219114602 - MER85 DNA T2_type 0 139 47 396 0 0 0 chr2 34141981 34142025 -219114558 + (CA)n Simple_repeat Simple_repeat 1 44 0 2623 129 2 19 chr2 34142987 34143413 -219113170 + L1M2 LINE L1 2 420 -6429 3365 163 47 2 chr2 34143416 34144016 -219112567 + L1M2 LINE L1 970 1596 -5253 2394 61 3 23 chr2 34144033 34144343 -219112240 + AluY SINE Alu 1 304 -7 214 301 60 48 chr2 34144521 34144604 -219111979 + L2 LINE L2 3189 3272 -41 2121 75 39 14 chr2 34146537 34146816 -219109767 - AluY SINE Alu -4 307 22 27 0 0 0 chr2 34146953 34146980 -219109603 + AT_rich Low_complexity Low_complexity 1 27 0 189 0 0 0 chr2 34147205 34147226 -219109357 + (T)n Simple_repeat Simple_repeat 1 21 0 964 175 0 5 chr2 34147256 34147445 -219109138 - L1PA4 LINE L1 -2 6153 5966 1074 15 8 0 chr2 34147952 34148084 -219108499 + L1P1 LINE L1 5647 5779 -376 524 192 10 20 chr2 34149294 34149393 -219107190 - MER2 DNA MER2_type -246 99 2 446 193 23 0 chr2 34150016 34150104 -219106479 - MER20 DNA MER1_type 0 219 130 358 306 45 22 chr2 34150378 34150512 -219106071 - MIR3 SINE MIR -15 193 57 404 319 15 7 chr2 34152167 34152302 -219104281 - L2 LINE L2 0 3313 3178 186 43 0 0 chr2 34154960 34154983 -219101600 + (T)n Simple_repeat Simple_repeat 1 23 0 2412 83 0 3 chr2 34156094 34156395 -219100188 + AluSc SINE Alu 1 300 -9 2371 102 0 3 chr2 34156396 34156700 -219099883 + AluY SINE Alu 1 303 -8 816 295 115 28 chr2 34156930 34157190 -219099393 + L1ME4a LINE L1 5258 5494 -627 2398 178 73 24 chr2 34157190 34157685 -219098898 - MLT2B1 LTR ERVL -1 519 1 816 295 115 28 chr2 34157685 34158217 -219098366 + L1ME4a LINE L1 5494 6119 -2 6283 173 118 36 chr2 34158419 34159840 -219096743 + MER52A LTR ERV1 219 1755 0 306 0 0 0 chr2 34161515 34161549 -219095034 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 254 136 0 0 chr2 34162379 34162423 -219094160 - AluSq SINE Alu -2 300 257 1410 105 14 29 chr2 34162423 34162633 -219093950 - AluSq SINE Alu -106 207 1 2427 64 0 3 chr2 34162733 34163028 -219093555 + AluY SINE Alu 13 306 -5 664 275 70 18 chr2 34164923 34165185 -219091398 - MIR SINE MIR 0 262 4 468 302 34 42 chr2 34166944 34167241 -219089342 - L3 LINE CR1 -3 1574 1230 2341 84 7 0 chr2 34167805 34168101 -219088482 + AluSp SINE Alu 1 298 -15 1960 153 0 0 chr2 34168967 34169249 -219087334 + AluSx SINE Alu 1 282 -30 213 39 0 0 chr2 34169252 34169278 -219087305 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 188 315 83 19 chr2 34169815 34169923 -219086660 + MIR SINE MIR 70 184 -78 2432 74 7 10 chr2 34170148 34170530 -219086053 - AluY SINE Alu 0 381 1 1730 161 13 13 chr2 34173185 34173484 -219083099 + AluJo SINE Alu 1 299 -13 381 304 145 50 chr2 34173495 34173960 -219082623 - L2 LINE L2 -32 3240 2736 261 83 0 0 chr2 34174453 34174489 -219082094 + (TA)n Simple_repeat Simple_repeat 1 36 0 356 217 60 12 chr2 34175099 34175182 -219081401 - L2 LINE L2 0 3313 3227 2452 69 0 0 chr2 34175182 34175471 -219081112 + AluSc SINE Alu 1 289 -20 790 188 0 36 chr2 34175646 34175784 -219080799 - FLAM_A SINE Alu 0 133 1 1907 234 107 48 chr2 34176260 34177207 -219079376 + L1ME3A LINE L1 2559 3561 -2585 271 296 79 46 chr2 34177217 34177369 -219079214 + MLT1J LTR MaLR 295 451 -60 3270 279 54 16 chr2 34177370 34178673 -219077910 + L1ME3A LINE L1 3840 5191 -955 2110 263 80 21 chr2 34178726 34179285 -219077298 + L1ME3A LINE L1 5352 5967 -203 2163 123 31 47 chr2 34179285 34179666 -219076917 + THE1C LTR MaLR 1 375 0 2110 263 80 21 chr2 34179666 34179854 -219076729 + L1ME3A LINE L1 5967 6143 -27 2125 113 7 3 chr2 34179854 34180179 -219076404 - AluSg SINE Alu 0 310 1 1755 130 47 18 chr2 34181087 34181395 -219075188 + AluSg SINE Alu 1 316 0 2206 102 0 20 chr2 34183035 34183340 -219073243 + AluSc SINE Alu 1 299 -10 1273 164 86 112 chr2 34183525 34183630 -219072953 - MER44D DNA MER2_type -1882 609 503 267 31 0 0 chr2 34183630 34183662 -219072921 + (CATA)n Simple_repeat Simple_repeat 2 33 0 1273 164 86 112 chr2 34183662 34183904 -219072679 - MER44D DNA MER2_type -1988 503 1 449 277 196 18 chr2 34183940 34184160 -219072423 - MIR SINE MIR 0 262 4 244 209 0 0 chr2 34184352 34184395 -219072188 + Tigger5 DNA MER2_type 1 43 -2280 1478 160 95 90 chr2 34184587 34184684 -219071899 + L1MB4 LINE L1 5767 5862 -318 2199 99 0 63 chr2 34184684 34185017 -219071566 + AluSx SINE Alu 1 312 0 1478 160 95 90 chr2 34185017 34185331 -219071252 + L1MB4 LINE L1 5862 6180 0 697 191 37 133 chr2 34186396 34186473 -219070110 - MER20 DNA MER1_type 0 219 136 2622 44 0 19 chr2 34186473 34186790 -219069793 - AluY SINE Alu 0 311 1 697 191 37 133 chr2 34186790 34186953 -219069630 - MER20 DNA MER1_type -83 136 2 359 283 145 6 chr2 34188271 34188430 -219068153 + MER5A DNA MER1_type 9 189 0 254 326 30 55 chr2 34188441 34188619 -219067964 - MER5B DNA MER1_type -3 186 1 2194 132 140 31 chr2 34188791 34189177 -219067406 + MSTA LTR MaLR 1 428 0 185 375 31 10 chr2 34191788 34191884 -219064699 - MIR SINE MIR -67 141 44 319 305 78 14 chr2 34192337 34192478 -219064105 - L2 LINE L2 -4 3309 3160 2169 77 0 24 chr2 34193365 34193663 -219062920 + AluY SINE Alu 1 291 -20 318 218 34 88 chr2 34194026 34194173 -219062410 + L2 LINE L2 3001 3139 -174 1850 103 7 18 chr2 34194669 34194950 -219061633 - AluY SINE Alu -33 278 1 2541 64 0 10 chr2 34196448 34196460 -219060123 - AluY SINE Alu -1 310 299 225 65 0 0 chr2 34196460 34196491 -219060092 + (TA)n Simple_repeat Simple_repeat 1 31 0 2541 64 0 10 chr2 34196491 34196791 -219059792 - AluY SINE Alu -12 299 1 216 235 20 0 chr2 34197289 34197340 -219059243 + L2 LINE L2 1765 1816 -1498 262 309 36 0 chr2 34197391 34197475 -219059108 + MIR SINE MIR 146 232 -30 216 0 0 0 chr2 34197839 34197863 -219058720 + (TG)n Simple_repeat Simple_repeat 2 25 0 292 311 108 7 chr2 34198792 34198940 -219057643 + MIR SINE MIR 20 182 -80 280 267 57 80 chr2 34199374 34199550 -219057033 + MER104 DNA Tc2 4 175 -5 2053 173 11 11 chr2 34199564 34199929 -219056654 - L1PB4 LINE L1 0 6156 5792 237 189 54 27 chr2 34200059 34200133 -219056450 + L1MC/D LINE L1 5741 5816 -1992 2176 80 31 7 chr2 34200145 34200433 -219056150 + AluY SINE Alu 1 295 -16 764 65 74 9 chr2 34200445 34200553 -219056030 + L1P5 LINE L1 5545 5659 -497 900 141 0 0 chr2 34200555 34200690 -219055893 - L1PB4 LINE L1 -383 5773 5639 1886 157 0 0 chr2 34200812 34201105 -219055478 + AluJb SINE Alu 6 298 -14 1398 232 304 8 chr2 34201492 34202091 -219054492 - LTR50 LTR ERVL -2 793 18 809 261 141 70 chr2 34202473 34202991 -219053592 - MLT1H1 LTR MaLR 0 555 1 2432 83 0 0 chr2 34203766 34204067 -219052516 + AluSx SINE Alu 1 301 -11 2092 171 49 0 chr2 34204630 34204976 -219051607 + MLT1A1 LTR MaLR 3 365 0 2267 62 10 40 chr2 34205015 34205319 -219051264 + AluY SINE Alu 1 295 -16 1587 231 52 30 chr2 34205666 34206107 -219050476 - MLT1C LTR MaLR -12 455 5 327 294 96 7 chr2 34206648 34206784 -219049799 + MIR SINE MIR 87 234 -28 2343 97 0 3 chr2 34206906 34207214 -219049369 - AluSq SINE Alu -4 309 3 2287 104 3 0 chr2 34207312 34207620 -219048963 - AluSg SINE Alu -1 309 1 608 124 11 0 chr2 34207672 34207761 -219048822 - 5S rRNA rRNA -31 90 1 3619 38 0 5 chr2 34208546 34208966 -219047617 + L1PA4 LINE L1 5735 6152 -3 243 0 0 0 chr2 34208970 34208997 -219047586 + (CAA)n Simple_repeat Simple_repeat 2 28 0 239 367 163 0 chr2 34209091 34209238 -219047345 - MIR SINE MIR -71 191 21 249 353 34 78 chr2 34210290 34210447 -219046136 + L3 LINE CR1 51 199 -1378 2370 81 10 3 chr2 34210447 34210754 -219045829 + AluY SINE Alu 1 309 -2 249 353 34 78 chr2 34210754 34210800 -219045783 + L3 LINE CR1 199 245 -1332 544 161 35 0 chr2 34211068 34211155 -219045428 + 5S rRNA rRNA 1 90 -31 180 352 0 0 chr2 34211218 34211289 -219045294 - L2 LINE L2 -525 2789 2719 240 239 33 103 chr2 34211290 34211474 -219045109 + MER104 DNA Tc2 1 171 -9 1629 324 88 21 chr2 34211521 34212428 -219044155 - L2 LINE L2 -627 2687 1720 402 314 154 33 chr2 34212496 34212795 -219043788 - L2 LINE L2 -556 2758 2424 1510 139 12 148 chr2 34212959 34213296 -219043287 + AluJb SINE Alu 1 291 -11 558 251 6 9 chr2 34214539 34214679 -219041904 + MIR3 SINE MIR 32 175 -33 2384 78 3 0 chr2 34217819 34218112 -219038471 - AluSp SINE Alu -19 294 1 1617 70 0 5 chr2 34218247 34218448 -219038135 + AluY SINE Alu 105 304 -7 195 42 0 0 chr2 34218833 34218857 -219037726 + (GGA)n Simple_repeat Simple_repeat 2 25 0 858 140 140 35 chr2 34219629 34219800 -219036783 - AluSg/x SINE Alu -16 296 108 572 279 135 5 chr2 34220030 34220238 -219036345 + MIR SINE MIR 9 243 -19 309 267 99 38 chr2 34220418 34220549 -219036034 - MER5A DNA MER1_type 0 189 51 189 0 0 0 chr2 34220551 34220572 -219036011 + (CTG)n Simple_repeat Simple_repeat 2 22 0 1265 143 135 8 chr2 34221835 34222072 -219034511 + Tigger7 DNA MER2_type 1 267 -466 570 157 11 0 chr2 34222077 34222166 -219034417 + Tigger7 DNA MER2_type 2397 2486 -1 377 290 73 0 chr2 34222169 34222293 -219034290 - MIR SINE MIR -117 145 13 1950 134 36 0 chr2 34222658 34222934 -219033649 + AluSx SINE Alu 3 288 -24 223 129 0 0 chr2 34223811 34223842 -219032741 - L2 LINE L2 -18 3295 3265 2141 115 10 0 chr2 34224737 34225033 -219031550 + AluSx SINE Alu 1 299 -13 2279 47 0 50 chr2 34225583 34225906 -219030677 - AluY SINE Alu 0 308 1 21 0 0 0 chr2 34227160 34227181 -219029402 + AT_rich Low_complexity Low_complexity 1 21 0 1513 136 182 25 chr2 34227762 34228086 -219028497 - THE1C LTR MaLR 0 375 1 351 0 0 0 chr2 34228247 34228286 -219028297 + (TG)n Simple_repeat Simple_repeat 2 40 0 2088 120 0 19 chr2 34228286 34228594 -219027989 - AluSx SINE Alu -9 303 2 266 75 0 25 chr2 34229222 34229262 -219027321 + MADE1 DNA Mariner 2 40 -40 2347 106 0 3 chr2 34229262 34229574 -219027009 - AluY SINE Alu 0 311 1 2198 110 3 3 chr2 34230359 34230658 -219025925 + AluSx SINE Alu 1 299 -13 909 163 0 96 chr2 34231548 34231757 -219024826 - MER53 DNA DNA 0 189 1 543 273 58 11 chr2 34232304 34232502 -219024081 - MIR SINE MIR 0 262 52 585 241 50 87 chr2 34232835 34232968 -219023615 - L1MA9 LINE L1 -123 6189 6053 1856 162 7 3 chr2 34232968 34233270 -219023313 - AluJb SINE Alu -9 303 1 585 241 50 87 chr2 34233270 34233435 -219023148 - L1MA9 LINE L1 -259 6053 5902 672 198 144 82 chr2 34233948 34234246 -219022337 + L1ME4a LINE L1 5709 6038 -83 1632 93 0 0 chr2 34234246 34234451 -219022132 + AluSg/x SINE Alu 85 289 -21 672 198 144 82 chr2 34234451 34234541 -219022042 + L1ME4a LINE L1 6038 6121 0 597 389 29 3 chr2 34234863 34235169 -219021414 + L3 LINE CR1 229 542 -1035 1485 179 42 45 chr2 34235305 34235617 -219020966 - AluJo SINE Alu -1 311 1 1554 209 138 20 chr2 34235870 34236277 -219020306 - MSTB2 LTR MaLR -2 455 1 458 293 176 55 chr2 34236392 34236863 -219019720 - L2 LINE L2 -547 2767 2240 583 267 128 15 chr2 34238332 34238527 -219018056 + MIR SINE MIR 46 262 0 609 81 35 0 chr2 34239516 34239603 -219016980 + L1MB8 LINE L1 6077 6166 -12 316 248 28 62 chr2 34239729 34239874 -219016709 - L1ME4a LINE L1 -209 5912 5773 1342 117 0 0 chr2 34239948 34240127 -219016456 - AluSg/x SINE Alu -2 310 132 210 37 0 0 chr2 34240127 34240154 -219016429 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1948 125 0 4 chr2 34240160 34240439 -219016144 - AluSx SINE Alu -23 289 12 2399 97 0 0 chr2 34240526 34240826 -219015757 - AluSg SINE Alu -9 301 2 438 130 0 98 chr2 34240856 34240948 -219015635 - L1MA5A LINE L1 0 6297 6215 21 0 0 0 chr2 34240983 34241004 -219015579 + AT_rich Low_complexity Low_complexity 1 21 0 27 73 0 0 chr2 34241062 34241117 -219015466 + AT_rich Low_complexity Low_complexity 1 55 0 1870 110 0 4 chr2 34241225 34241471 -219015112 + AluSx SINE Alu 32 276 -36 219 69 0 0 chr2 34241484 34241513 -219015070 + (TAA)n Simple_repeat Simple_repeat 2 30 0 247 364 45 0 chr2 34242412 34242500 -219014083 + MIR3 SINE MIR 65 156 -52 482 258 26 53 chr2 34242708 34242859 -219013724 + MIR SINE MIR 54 200 -62 416 289 107 13 chr2 34242962 34243121 -219013462 - L2 LINE L2 -185 3087 2914 291 282 35 0 chr2 34243230 34243315 -219013268 - MIR SINE MIR -62 200 113 2040 113 22 0 chr2 34243350 34243674 -219012909 - AluSg SINE Alu 0 330 1 230 0 0 32 chr2 34243683 34243714 -219012869 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 1416 182 91 3 chr2 34243714 34244010 -219012573 - L1MD3 LINE L1 -170 7825 7504 2025 75 120 0 chr2 34244944 34245210 -219011373 + AluSc SINE Alu 1 298 -1 209 268 0 0 chr2 34245443 34245499 -219011084 - MIR SINE MIR -50 212 157 293 252 75 101 chr2 34247616 34247775 -219008808 - MIR3 SINE MIR -7 201 47 274 188 58 14 chr2 34248548 34248617 -219007966 + L1ME LINE L1 5532 5603 -518 1025 111 12 25 chr2 34248860 34249022 -219007561 + AluSx SINE Alu 1 160 -152 471 48 0 0 chr2 34249030 34249092 -219007491 + (CA)n Simple_repeat Simple_repeat 2 63 0 2326 107 3 53 chr2 34249300 34249427 -219007156 - MER1B DNA MER1_type -2373 337 205 2440 73 3 3 chr2 34249427 34249729 -219006854 - AluY SINE Alu -9 302 1 2326 107 3 53 chr2 34249729 34249956 -219006627 - MER1B DNA MER1_type -2505 205 1 681 246 67 88 chr2 34250982 34251111 -219005472 - L2 LINE L2 -14 3299 3169 1978 118 0 44 chr2 34251111 34251407 -219005176 + AluSc SINE Alu 1 283 -26 681 246 67 88 chr2 34251407 34251562 -219005021 - L2 LINE L2 -144 3169 3021 1034 245 107 15 chr2 34251668 34252044 -219004539 - L2 LINE L2 -983 2331 1863 2337 97 0 0 chr2 34252367 34252667 -219003916 + AluSx SINE Alu 1 300 -12 2360 78 3 0 chr2 34252887 34253180 -219003403 + AluSc SINE Alu 1 294 -15 1599 204 250 23 chr2 34253236 34253764 -219002819 + L1ME2 LINE L1 5508 6155 -9 21 57 0 0 chr2 34254417 34254452 -219002131 + AT_rich Low_complexity Low_complexity 1 35 0 2254 108 7 0 chr2 34255080 34255377 -219001206 + AluSx SINE Alu 1 299 -13 2068 115 3 7 chr2 34256030 34256326 -219000257 - AluSg SINE Alu -15 295 1 422 295 127 34 chr2 34256488 34256725 -218999858 - MIR SINE MIR 0 262 4 1510 182 11 7 chr2 34260348 34260634 -218995949 + AluJo SINE Alu 1 287 -25 213 333 178 67 chr2 34260712 34260892 -218995691 - L2 LINE L2 0 3272 3073 405 169 39 0 chr2 34260970 34261047 -218995536 - MER116 DNA Mariner 0 80 1 1903 138 31 3 chr2 34261744 34262035 -218994548 + AluSq SINE Alu 1 299 -14 1354 166 4 53 chr2 34264044 34264291 -218992292 + MER46A DNA MER2_type 2 236 0 271 303 193 0 chr2 34264428 34264537 -218992046 - L2 LINE L2 0 3313 3184 1295 136 14 47 chr2 34264979 34265193 -218991390 + AluJo SINE Alu 87 293 -19 2387 94 0 0 chr2 34265196 34265495 -218991088 + AluSq SINE Alu 1 299 -14 423 291 151 48 chr2 34266012 34266166 -218990417 - L2 LINE L2 0 3313 3176 1959 129 9 55 chr2 34266166 34266492 -218990091 + AluSx SINE Alu 1 311 -1 423 291 151 48 chr2 34266492 34266588 -218989995 - L2 LINE L2 -137 3176 3037 764 202 90 56 chr2 34266784 34267017 -218989566 + L1MC1 LINE L1 6093 6333 0 399 213 37 28 chr2 34268654 34268762 -218987821 - MIR SINE MIR -4 258 150 1818 113 94 50 chr2 34269116 34269435 -218987148 - MER47A DNA MER2_type 0 366 34 771 142 9 0 chr2 34269436 34269549 -218987034 + AluSq/x SINE Alu 3 116 -196 22 35 0 0 chr2 34270122 34270151 -218986432 + AT_rich Low_complexity Low_complexity 1 29 0 1736 169 3 29 chr2 34270573 34270881 -218985702 + AluJo SINE Alu 1 300 -12 348 309 92 94 chr2 34271824 34272280 -218984303 + L2 LINE L2 2809 3263 -9 190 262 71 71 chr2 34272509 34272593 -218983990 - L2 LINE L2 0 3272 3189 365 305 67 70 chr2 34272595 34272880 -218983703 + L2 LINE L2 2985 3268 -4 2305 101 0 3 chr2 34273854 34274152 -218982431 + AluSx SINE Alu 1 297 -15 2499 59 0 7 chr2 34274287 34274594 -218981989 + AluY SINE Alu 1 305 -6 208 219 0 0 chr2 34275155 34275196 -218981387 + L3 LINE CR1 1523 1563 -14 1890 121 38 0 chr2 34276622 34276911 -218979672 + AluSx SINE Alu 1 300 -12 515 280 89 52 chr2 34277748 34278019 -218978564 + L3 LINE CR1 1294 1574 -3 22 0 0 0 chr2 34278432 34278454 -218978129 + AT_rich Low_complexity Low_complexity 1 22 0 447 297 7 71 chr2 34278662 34278817 -218977766 - MIR3 SINE MIR -28 180 36 603 343 99 33 chr2 34279125 34279574 -218977009 + L2 LINE L2 1924 2342 -972 189 0 0 0 chr2 34279574 34279595 -218976988 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2264 100 0 0 chr2 34279598 34279879 -218976704 - AluSg SINE Alu -25 285 5 603 343 99 33 chr2 34279879 34280162 -218976421 + L2 LINE L2 2343 2709 -605 2104 146 0 0 chr2 34280420 34280729 -218975854 - AluSx SINE Alu 0 312 4 216 310 69 0 chr2 34280921 34280979 -218975604 + L2 LINE L2 3207 3268 -4 23 54 0 0 chr2 34281048 34281085 -218975498 + AT_rich Low_complexity Low_complexity 1 37 0 2432 63 0 13 chr2 34281314 34281616 -218974967 - AluY SINE Alu -13 298 1 405 0 0 0 chr2 34282140 34282185 -218974398 + (CA)n Simple_repeat Simple_repeat 1 45 0 1339 146 9 9 chr2 34282198 34282418 -218974165 - AluJo SINE Alu -13 299 80 1386 196 116 19 chr2 34282735 34283046 -218973537 + MER2 DNA MER2_type 1 341 -4 193 94 0 0 chr2 34283214 34283246 -218973337 + L2 LINE L2 3022 3053 -219 2378 157 13 8 chr2 34283458 34283853 -218972730 - LOR1b LTR ERV1 0 461 65 1979 67 119 0 chr2 34283854 34284122 -218972461 + AluY SINE Alu 2 301 -10 217 287 11 0 chr2 34285831 34285925 -218970658 + (TA)n Simple_repeat Simple_repeat 2 96 0 23 0 0 0 chr2 34286811 34286834 -218969749 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 34286881 34286902 -218969681 + AT_rich Low_complexity Low_complexity 1 21 0 191 83 0 0 chr2 34287421 34287445 -218969138 - MIR SINE MIR -140 68 45 183 265 218 14 chr2 34289157 34289304 -218967279 + MIR SINE MIR 83 259 -3 256 238 199 37 chr2 34290013 34290149 -218966434 + MIR3 SINE MIR 13 165 -43 335 302 43 7 chr2 34290194 34290333 -218966250 - MIR SINE MIR -3 259 116 752 158 17 0 chr2 34293100 34293220 -218963363 - FLAM_C SINE Alu -11 122 1 312 294 159 32 chr2 34294067 34294193 -218962390 + MIR SINE MIR 12 153 -109 1715 129 105 14 chr2 34295924 34296210 -218960373 + AluJb SINE Alu 1 312 0 1907 101 14 20 chr2 34296394 34296690 -218959893 - AluSg SINE Alu -16 294 1 228 333 97 0 chr2 34296975 34297068 -218959515 + MIR SINE MIR 36 137 -71 2384 93 0 10 chr2 34297368 34297679 -218958904 + AluSx SINE Alu 1 308 -4 2434 90 15 0 chr2 34297679 34298013 -218958570 + L1PA14 LINE L1 5490 5828 -333 2043 102 67 0 chr2 34298014 34298298 -218958285 + AluSp SINE Alu 2 304 -9 495 293 142 5 chr2 34299386 34299591 -218956992 + MIR SINE MIR 30 262 0 488 223 85 0 chr2 34300375 34300505 -218956078 + MER5A DNA MER1_type 49 189 0 468 147 0 0 chr2 34300513 34300588 -218955995 + AluJ/FRAM SINE Alu 225 299 -13 2167 109 0 0 chr2 34300649 34300933 -218955650 - AluSg SINE Alu -26 284 1 2026 113 20 14 chr2 34301489 34301782 -218954801 - AluJb SINE Alu -17 295 1 307 272 33 11 chr2 34301987 34302079 -218954504 + CT-rich Low_complexity Low_complexity 3 96 0 427 160 126 0 chr2 34302174 34302293 -218954290 - L1ME3A LINE L1 -86 6084 5951 806 216 56 61 chr2 34303143 34303178 -218953405 - MER58A DNA MER1_type -2204 216 182 2066 146 0 7 chr2 34303178 34303480 -218953103 - AluSg SINE Alu -10 300 1 806 216 56 61 chr2 34303480 34303657 -218952926 - MER58A DNA MER1_type -2238 182 5 645 164 10 0 chr2 34303873 34303977 -218952606 - FLAM_A SINE Alu -12 130 26 1112 98 149 0 chr2 34304049 34304223 -218952360 - L1PA14 LINE L1 -2 6159 5960 195 42 0 0 chr2 34304224 34304248 -218952335 + (T)n Simple_repeat Simple_repeat 1 24 0 7822 43 0 27 chr2 34304275 34305621 -218950962 - L1PA5 LINE L1 0 6154 4830 2382 88 0 0 chr2 34305973 34306270 -218950313 + AluY SINE Alu 1 297 -14 406 223 155 10 chr2 34306330 34306433 -218950150 - L2 LINE L2 0 3313 3196 2226 98 0 23 chr2 34306530 34306837 -218949746 - AluSx SINE Alu -12 300 1 526 294 13 7 chr2 34307201 34307354 -218949229 - LTR16A LTR ERVL -2 448 295 2778 249 102 44 chr2 34307356 34307719 -218948864 - Charlie7 DNA MER1_type -1090 1522 1181 2328 80 3 10 chr2 34307719 34308018 -218948565 + AluSq SINE Alu 1 297 -16 2778 249 102 44 chr2 34308018 34308860 -218947723 - Charlie7 DNA MER1_type -1431 1181 242 1580 189 0 27 chr2 34308860 34309157 -218947426 - AluJo SINE Alu -23 289 1 2778 249 102 44 chr2 34309157 34309188 -218947395 - Charlie7 DNA MER1_type -2370 242 214 235 245 38 0 chr2 34309190 34309243 -218947340 + MLT1J2 LTR MaLR 392 446 -4 529 311 115 17 chr2 34309279 34309514 -218947069 - L3 LINE CR1 -688 889 632 2574 66 0 0 chr2 34309979 34310282 -218946301 + AluSx SINE Alu 1 303 -9 221 395 40 0 chr2 34310373 34310497 -218946086 - L2 LINE L2 -938 2376 2248 1212 203 4 4 chr2 34310700 34310936 -218945647 + AluJo SINE Alu 59 294 -18 1770 120 71 4 chr2 34311501 34311788 -218944795 + AluSx SINE Alu 3 307 0 2165 75 13 32 chr2 34312105 34312413 -218944170 - AluY SINE Alu -9 302 1 2321 103 3 6 chr2 34312426 34312737 -218943846 - AluSg SINE Alu 0 310 1 311 286 135 51 chr2 34313393 34313763 -218942820 + MLT1K LTR MaLR 188 588 0 2353 62 0 0 chr2 34313833 34314107 -218942476 + AluY SINE Alu 1 274 -37 183 42 0 0 chr2 34314107 34314131 -218942452 + (CA)n Simple_repeat Simple_repeat 1 24 0 313 266 38 87 chr2 34314506 34314690 -218941893 + MLT1K LTR MaLR 219 393 -195 215 345 115 7 chr2 34315123 34315262 -218941321 - MIR SINE MIR -89 173 20 2620 40 3 0 chr2 34315513 34315813 -218940770 - AluY SINE Alu -8 303 3 2216 62 21 92 chr2 34316229 34316566 -218940017 - AluYb8 SINE Alu -5 313 1 1261 165 0 36 chr2 34316680 34316904 -218939679 + L1MB2 LINE L1 5949 6164 -7 304 319 52 37 chr2 34317191 34317326 -218939257 - MER5A DNA MER1_type -3 186 50 * 341 281 44 26 chr2 34317214 34317328 -218939255 + MER5A DNA MER1_type 37 152 -37 364 153 0 0 chr2 34317334 34317393 -218939190 - Alu SINE Alu -2 299 241 2038 139 3 3 chr2 34317433 34317734 -218938849 - AluSg SINE Alu -9 301 1 213 306 59 24 chr2 34318500 34318585 -218937998 + L3 LINE CR1 1488 1575 -2 1846 82 0 0 chr2 34319198 34319430 -218937153 - AluY SINE Alu 0 311 80 463 205 109 32 chr2 34319467 34319623 -218936960 + MLT1E LTR MaLR 1 168 -425 1088 209 110 22 chr2 34319680 34319953 -218936630 - MLT1E LTR MaLR -97 496 200 282 247 0 14 chr2 34321928 34322001 -218934582 + CT-rich Low_complexity Low_complexity 2 73 0 2459 76 0 0 chr2 34322195 34322496 -218934087 + AluSx SINE Alu 1 301 -11 297 169 182 0 chr2 34322914 34322991 -218933592 - MER5A DNA MER1_type -3 186 96 2244 94 3 19 chr2 34323032 34323341 -218933242 - AluSc SINE Alu -5 304 1 28 48 0 0 chr2 34324750 34324792 -218931791 + AT_rich Low_complexity Low_complexity 1 42 0 2214 107 7 0 chr2 34326007 34326306 -218930277 + AluSx SINE Alu 1 301 -11 779 159 19 111 chr2 34327193 34327401 -218929182 - MER53 DNA DNA 0 189 1 543 273 58 11 chr2 34327950 34328148 -218928435 - MIR SINE MIR 0 262 52 585 241 50 87 chr2 34328484 34328617 -218927966 - L1MA9 LINE L1 -123 6189 6053 1846 163 7 3 chr2 34328617 34328918 -218927665 - AluJb SINE Alu -10 302 1 585 241 50 87 chr2 34328918 34329083 -218927500 - L1MA9 LINE L1 -259 6053 5902 692 195 144 82 chr2 34329596 34329894 -218926689 + L1ME4a LINE L1 5709 6038 -83 1616 98 0 0 chr2 34329894 34330099 -218926484 + AluSg/x SINE Alu 87 291 -21 692 195 144 82 chr2 34330099 34330189 -218926394 + L1ME4a LINE L1 6038 6121 0 1230 163 22 132 chr2 34331321 34331342 -218925241 - MER33 DNA MER1_type -2261 324 302 1521 179 20 27 chr2 34331342 34331639 -218924944 + AluJo SINE Alu 18 312 0 1230 163 22 132 chr2 34331639 34331758 -218924825 - MER33 DNA MER1_type -2283 302 171 1589 169 7 25 chr2 34331758 34332037 -218924546 + AluJo SINE Alu 12 285 -27 1230 163 22 132 chr2 34332037 34332258 -218924325 - MER33 DNA MER1_type -2414 171 2 22 0 0 0 chr2 34333338 34333360 -218923223 + AT_rich Low_complexity Low_complexity 1 22 0 24 96 0 0 chr2 34333421 34333494 -218923089 + AT_rich Low_complexity Low_complexity 1 73 0 186 43 0 0 chr2 34333872 34333895 -218922688 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2261 63 7 11 chr2 34333897 34334184 -218922399 - AluY SINE Alu -25 286 1 1667 63 0 5 chr2 34334588 34334794 -218921789 + AluY SINE Alu 1 205 -106 477 35 0 0 chr2 34334794 34334851 -218921732 + AluY SINE Alu 243 299 -11 1942 123 42 3 chr2 34335167 34335451 -218921132 - AluSx SINE Alu -17 295 1 2761 158 12 26 chr2 34336073 34336573 -218920010 + L1MB4 LINE L1 5687 6179 -1 310 71 0 0 chr2 34336599 34336641 -218919942 + L1MB8 LINE L1 6131 6172 -6 2196 107 3 0 chr2 34337205 34337494 -218919089 + AluSc SINE Alu 1 290 -19 678 248 66 30 chr2 34337602 34337800 -218918783 - MLT1F1 LTR MaLR -8 559 355 1888 88 8 4 chr2 34338490 34338740 -218917843 + AluY SINE Alu 44 294 -17 180 0 0 0 chr2 34338961 34338981 -218917602 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2270 86 33 0 chr2 34339711 34340014 -218916569 - AluSp SINE Alu 0 313 1 22 56 0 0 chr2 34340403 34340439 -218916144 + AT_rich Low_complexity Low_complexity 1 36 0 2410 71 0 3 chr2 34340754 34341050 -218915533 + AluY SINE Alu 1 295 -16 2314 110 0 0 chr2 34341064 34341365 -218915218 + AluSx SINE Alu 1 301 -11 2380 82 3 3 chr2 34341607 34341913 -218914670 + AluY SINE Alu 1 306 -5 353 304 25 20 chr2 34341925 34342093 -218914490 + MIR SINE MIR 16 182 -61 2545 43 7 3 chr2 34342725 34343025 -218913558 + AluY SINE Alu 1 301 -10 2214 57 0 50 chr2 34344270 34344593 -218911990 - AluY SINE Alu 0 308 1 21 0 0 0 chr2 34345847 34345868 -218910715 + AT_rich Low_complexity Low_complexity 1 21 0 1539 138 179 25 chr2 34346449 34346774 -218909809 - THE1C LTR MaLR 0 375 1 333 0 0 0 chr2 34346937 34346974 -218909609 + (TG)n Simple_repeat Simple_repeat 2 38 0 2013 110 3 21 chr2 34346990 34347281 -218909302 - AluSx SINE Alu -25 287 2 296 77 0 0 chr2 34347909 34347948 -218908635 + MADE1 DNA Mariner 2 40 -40 2347 106 0 3 chr2 34347948 34348260 -218908323 - AluY SINE Alu 0 311 1 1720 132 73 45 chr2 34349046 34349335 -218907248 + AluSq SINE Alu 1 297 -16 388 247 0 21 chr2 34349346 34349439 -218907144 - MIR3 SINE MIR -6 202 112 562 189 9 0 chr2 34349488 34349594 -218906989 - L1MB5 LINE L1 0 6174 6068 275 261 190 62 chr2 34350556 34350767 -218905816 + MIR SINE MIR 20 257 -5 2546 235 57 16 chr2 34351246 34352532 -218904051 - L1M2c LINE L1 -4504 2603 1275 4168 79 5 17 chr2 34352735 34353320 -218903263 - L1P LINE L1 -962 5184 4607 1603 63 0 5 chr2 34353318 34353525 -218903058 - L1PA14 LINE L1 -187 5974 5769 * 231 279 33 0 chr2 34353658 34353719 -218902864 - MIR SINE MIR -116 146 84 193 307 183 46 chr2 34353786 34353939 -218902644 - MIR3 SINE MIR -25 183 10 2015 112 17 7 chr2 34354634 34354977 -218901606 - AluSx SINE Alu 0 359 14 2015 112 17 7 chr2 34356672 34357015 -218899568 - AluSx SINE Alu 0 359 14 779 113 105 8 chr2 34357877 34358010 -218898573 + L1MB3 LINE L1 6029 6174 -9 2291 82 0 50 chr2 34358010 34358328 -218898255 - AluY SINE Alu -9 302 1 897 175 19 0 chr2 34360002 34360161 -218896422 + MLT1B LTR MaLR 1 162 -228 2145 197 130 46 chr2 34360161 34360830 -218895753 - MER50 LTR ERV1 0 734 10 1291 126 31 27 chr2 34360837 34361060 -218895523 + MLT1B LTR MaLR 167 390 0 1506 130 22 115 chr2 34361284 34361607 -218894976 + AluYb8 SINE Alu 1 293 -25 832 184 17 46 chr2 34361627 34361801 -218894782 + MLT1D LTR MaLR 5 173 -332 1247 143 0 11 chr2 34361883 34362072 -218894511 + AluJb SINE Alu 1 187 -125 333 242 15 0 chr2 34362075 34362141 -218894442 + MLT1E2 LTR MaLR 530 596 -30 1960 126 0 14 chr2 34362632 34362953 -218893630 - AluSx SINE Alu 0 317 1 2210 89 0 10 chr2 34363522 34363813 -218892770 + AluSc SINE Alu 1 288 -21 1432 183 114 34 chr2 34364027 34364078 -218892505 + MER34C LTR ERV1 36 82 -503 2401 77 0 3 chr2 34364078 34364376 -218892207 - AluSc SINE Alu -12 297 1 1432 183 114 34 chr2 34364376 34364798 -218891785 + MER34C LTR ERV1 82 581 -4 2150 123 0 0 chr2 34365206 34365507 -218891076 + AluSq SINE Alu 1 301 -12 230 300 50 20 chr2 34365534 34365634 -218890949 - L2 LINE L2 -343 2929 2827 358 297 45 18 chr2 34366314 34366425 -218890158 - L2 LINE L2 -1 3312 3199 2418 65 0 0 chr2 34366559 34366851 -218889732 - AluY SINE Alu -15 296 5 226 263 11 84 chr2 34366993 34367088 -218889495 + MIR SINE MIR 18 105 -103 23 33 0 0 chr2 34367724 34367754 -218888829 + AT_rich Low_complexity Low_complexity 1 30 0 345 356 20 14 chr2 34368022 34368168 -218888415 - L1M4 LINE L1 -1300 4846 4700 6123 142 26 27 chr2 34368189 34369346 -218887237 - L1MC2 LINE L1 0 6344 5186 1144 266 139 20 chr2 34369331 34370022 -218886561 - L1M4 LINE L1 -1462 4684 3912 * 2278 104 0 28 chr2 34370838 34371155 -218885428 + AluSq SINE Alu 1 308 -5 360 178 0 0 chr2 34371370 34371443 -218885140 + CT-rich Low_complexity Low_complexity 2 74 0 183 42 0 0 chr2 34371438 34371462 -218885121 + (TTCCC)n Simple_repeat Simple_repeat 1 24 0 * 2177 104 14 0 chr2 34371462 34371749 -218884834 - AluSx SINE Alu -21 291 1 1980 88 0 0 chr2 34371876 34372127 -218884456 + AluY SINE Alu 44 294 -17 342 0 0 0 chr2 34373230 34373268 -218883315 + (TG)n Simple_repeat Simple_repeat 2 39 0 184 349 23 12 chr2 34375132 34375218 -218881365 - MIR3 SINE MIR -4 204 118 347 252 79 36 chr2 34375286 34375425 -218881158 - MIR SINE MIR 0 262 118 2316 109 0 0 chr2 34376812 34377114 -218879469 - AluSx SINE Alu -10 302 1 252 322 117 2 chr2 34378043 34378209 -218878374 - MIR SINE MIR -67 141 3 2258 108 3 0 chr2 34378242 34378539 -218878044 + AluSp SINE Alu 1 298 -15 1362 198 133 35 chr2 34379183 34379521 -218877062 + MLT1A2 LTR MaLR 4 374 0 1902 164 20 49 chr2 34381926 34382273 -218874310 - MER1B DNA MER1_type 0 337 1 811 199 0 0 chr2 34382347 34382478 -218874105 + FLAM_C SINE Alu 6 136 -7 509 268 84 55 chr2 34382492 34382802 -218873781 - Charlie8 DNA MER1_type -2053 364 46 2022 153 3 10 chr2 34383306 34383620 -218872963 + AluSx SINE Alu 1 312 0 22 0 0 0 chr2 34383838 34383860 -218872723 + AT_rich Low_complexity Low_complexity 1 22 0 346 263 0 0 chr2 34384701 34384777 -218871806 + CT-rich Low_complexity Low_complexity 3 78 0 892 239 39 35 chr2 34384893 34385152 -218871431 - MIR SINE MIR 0 262 3 191 306 153 42 chr2 34385522 34385666 -218870917 + L2 LINE L2 3104 3263 -9 1879 128 31 7 chr2 34386017 34386306 -218870277 + AluSx SINE Alu 1 296 -16 201 250 0 0 chr2 34386497 34386545 -218870038 + A-rich Low_complexity Low_complexity 5 52 0 690 132 0 0 chr2 34387451 34387587 -218868996 + (T)n Simple_repeat Simple_repeat 1 136 0 213 288 0 0 chr2 34387590 34387663 -218868920 + T-rich Low_complexity Low_complexity 1 73 0 1588 231 52 30 chr2 34387984 34388425 -218868158 + MLT1C LTR MaLR 5 455 -12 2434 52 7 0 chr2 34388772 34389063 -218867520 - AluY SINE Alu -16 295 3 2170 62 21 95 chr2 34389479 34389817 -218866766 - AluYb8 SINE Alu -5 313 1 1231 164 0 40 chr2 34389931 34390156 -218866427 + L1MB2 LINE L1 5949 6164 -7 304 319 52 37 chr2 34390443 34390578 -218866005 - MER5A DNA MER1_type -3 186 50 * 341 281 44 26 chr2 34390466 34390580 -218866003 + MER5A DNA MER1_type 37 152 -37 364 153 0 0 chr2 34390586 34390645 -218865938 - Alu SINE Alu -2 300 242 2038 139 3 3 chr2 34390685 34390986 -218865597 - AluSg SINE Alu -9 301 1 213 306 59 24 chr2 34391752 34391837 -218864746 + L3 LINE CR1 1488 1575 -2 1829 86 0 0 chr2 34392453 34392685 -218863898 - AluY SINE Alu 0 311 80 463 205 109 32 chr2 34392722 34392878 -218863705 + MLT1E LTR MaLR 1 168 -425 1088 209 110 22 chr2 34392935 34393208 -218863375 - MLT1E LTR MaLR -97 496 200 2054 99 67 3 chr2 34394225 34394508 -218862075 + AluSc SINE Alu 1 301 -8 1744 151 3 32 chr2 34394508 34394792 -218861791 - AluJo SINE Alu -35 277 1 312 294 159 32 chr2 34395640 34395766 -218860817 + MIR SINE MIR 12 153 -109 1715 129 105 14 chr2 34397498 34397784 -218858799 + AluJb SINE Alu 1 312 0 2183 106 7 0 chr2 34397968 34398261 -218858322 - AluY SINE Alu -16 295 1 1398 232 304 8 chr2 34398567 34399166 -218857417 - LTR50 LTR ERVL -2 793 18 834 259 141 70 chr2 34399548 34400066 -218856517 - MLT1H1 LTR MaLR 0 555 1 2432 83 0 0 chr2 34400842 34401143 -218855440 + AluSx SINE Alu 1 301 -11 2072 173 49 0 chr2 34401707 34402053 -218854530 + MLT1A1 LTR MaLR 3 365 0 2007 123 3 35 chr2 34402092 34402410 -218854173 + AluSg SINE Alu 1 308 -2 2110 78 7 11 chr2 34402415 34402743 -218853840 + AluY SINE Alu 1 327 0 377 213 147 20 chr2 34402916 34403066 -218853517 + MIR SINE MIR 21 189 -73 25 0 0 0 chr2 34403181 34403206 -218853377 + AT_rich Low_complexity Low_complexity 1 25 0 699 225 91 14 chr2 34403410 34403588 -218852995 - MIR3 SINE MIR -6 202 11 2048 135 3 25 chr2 34404207 34404546 -218852037 - AluSx SINE Alu 0 332 1 237 364 0 80 chr2 34404726 34404877 -218851706 - L2 LINE L2 -177 3095 2957 691 227 36 50 chr2 34405031 34405309 -218851274 - L1MC5 LINE L1 -51 7910 7637 304 365 54 10 chr2 34405435 34405638 -218850945 - L2 LINE L2 -723 2591 2380 742 188 0 0 chr2 34405725 34405837 -218850746 + FLAM_A SINE Alu 19 130 -12 701 165 0 10 chr2 34405897 34406000 -218850583 + AluJb SINE Alu 2 103 -209 1342 184 0 18 chr2 34407082 34407305 -218849278 + MER20 DNA MER1_type 1 219 0 1417 164 117 4 chr2 34407640 34407914 -218848669 - AluJb SINE Alu -5 307 3 1218 338 62 13 chr2 34408231 34408909 -218847674 + L2 LINE L2 1606 2316 -998 249 229 143 0 chr2 34408921 34408991 -218847592 + L2 LINE L2 3224 3303 -10 1943 137 7 13 chr2 34409116 34409423 -218847160 + AluSx SINE Alu 4 308 -4 4330 124 29 75 chr2 34410583 34410630 -218845953 + Tigger1 DNA MER2_type 149 197 -2221 252 0 0 0 chr2 34410630 34410658 -218845925 + (TTA)n Simple_repeat Simple_repeat 1 28 0 1932 142 0 4 chr2 34410658 34410939 -218845644 - AluSx SINE Alu -32 280 1 4330 124 29 75 chr2 34410939 34411012 -218845571 + Tigger1 DNA MER2_type 196 271 -2147 1450 191 25 14 chr2 34411012 34411290 -218845293 - AluJb SINE Alu -31 281 1 4330 124 29 75 chr2 34411290 34411935 -218844648 + Tigger1 DNA MER2_type 271 880 -1538 808 142 0 0 chr2 34411935 34412055 -218844528 + FRAM SINE Alu 40 159 -17 5635 104 14 54 chr2 34412072 34412916 -218843667 + Tigger1 DNA MER2_type 869 1677 -741 2219 114 0 0 chr2 34412916 34413213 -218843370 + AluSq SINE Alu 1 297 -16 5635 104 14 54 chr2 34413213 34413254 -218843329 + Tigger1 DNA MER2_type 1677 1718 -700 370 111 0 0 chr2 34413252 34413306 -218843277 + Tigger1 DNA MER2_type 2258 2311 -107 * 374 280 173 7 chr2 34413393 34413543 -218843040 + MIR SINE MIR 19 193 -69 609 14 0 0 chr2 34414500 34414570 -218842013 + (TTTC)n Simple_repeat Simple_repeat 3 72 0 1246 273 80 25 chr2 34414811 34414926 -218841657 - L1ME4a LINE L1 -170 6020 5913 2307 92 0 3 chr2 34414926 34415219 -218841364 - AluSc SINE Alu -17 292 1 1246 273 80 25 chr2 34415219 34415692 -218840891 - L1ME4a LINE L1 -277 5913 5400 2130 116 3 3 chr2 34415982 34416274 -218840309 - AluSx SINE Alu -14 298 7 334 273 89 94 chr2 34416285 34416900 -218839683 - L1ME4a LINE L1 -1125 5090 4482 2555 57 0 0 chr2 34416900 34417198 -218839385 - AluY SINE Alu -13 298 1 334 273 89 94 chr2 34417198 34417716 -218838867 - L1ME4a LINE L1 -1733 4482 3963 1456 190 0 22 chr2 34417727 34418001 -218838582 - AluJo SINE Alu -44 268 1 244 303 26 57 chr2 34418294 34418522 -218838061 - L1ME4a LINE L1 -3141 3074 2854 227 325 102 64 chr2 34418649 34418806 -218837777 - L2 LINE L2 0 3272 3110 1192 89 6 0 chr2 34419204 34419361 -218837222 + AluSg SINE Alu 11 168 -142 311 48 0 0 chr2 34419365 34419407 -218837176 + AluSc SINE Alu 255 296 -3 280 275 132 57 chr2 34419429 34419599 -218836984 - L2 LINE L2 -1409 1905 1749 2264 68 0 68 chr2 34419599 34419920 -218836663 + AluY SINE Alu 1 299 -12 280 275 132 57 chr2 34419920 34420152 -218836431 - L2 LINE L2 -1565 1749 1473 2364 148 0 20 chr2 34420333 34420677 -218835906 - MER1B DNA MER1_type 0 337 1 2766 124 43 24 chr2 34420688 34420849 -218835734 + MSTA LTR MaLR 1 157 -271 1544 103 158 48 chr2 34420849 34421122 -218835461 - AluSg1 SINE Alu -6 303 1 2766 124 43 24 chr2 34421122 34421380 -218835203 + MSTA LTR MaLR 157 428 0 326 256 35 35 chr2 34421940 34422026 -218834557 + HAL1 LINE L1 3 88 -2419 613 167 0 26 chr2 34422028 34422142 -218834441 - L1M3e LINE L1 -6913 117 7 1297 236 64 21 chr2 34422142 34422469 -218834114 - MLT1F LTR MaLR -201 341 1 572 192 33 0 chr2 34422621 34422741 -218833842 - MLT1B LTR MaLR -46 344 221 385 195 23 11 chr2 34422844 34422931 -218833652 - MLT1B LTR MaLR -92 298 211 301 267 35 35 chr2 34423244 34423330 -218833253 + HAL1 LINE L1 3 88 -2419 472 260 13 78 chr2 34423339 34423493 -218833090 + HAL1 LINE L1 410 553 -1954 252 301 19 58 chr2 34423634 34423737 -218832846 - MLT1K LTR MaLR -362 226 128 400 250 203 37 chr2 34424949 34425249 -218831334 - L1ME4a LINE L1 -4070 2326 1977 483 225 18 0 chr2 34425313 34425424 -218831159 - L1MA10 LINE L1 -3 6331 6219 1483 147 121 11 chr2 34425610 34425882 -218830701 - AluSg1 SINE Alu -7 302 1 277 313 85 24 chr2 34426347 34426527 -218830056 - MIR SINE MIR -67 141 3 21 57 0 0 chr2 34427029 34427064 -218829519 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 34427691 34427712 -218828871 + AT_rich Low_complexity Low_complexity 1 21 0 2427 57 0 27 chr2 34427846 34428145 -218828438 - AluY SINE Alu -20 291 1 2166 177 6 5 chr2 34428217 34428709 -218827874 - MER67A LTR ERV1 -2 541 1 517 291 62 36 chr2 34428733 34429008 -218827575 + L1MC4a LINE L1 5619 5900 -1908 2074 131 3 3 chr2 34429228 34429526 -218827057 - AluSx SINE Alu -14 298 1 1964 132 11 0 chr2 34429986 34430288 -218826295 - AluSx SINE Alu 0 305 1 2243 94 16 7 chr2 34431078 34431387 -218825196 - AluSx SINE Alu 0 312 1 180 0 0 0 chr2 34431665 34431685 -218824898 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 230 261 0 15 chr2 34432102 34432167 -218824416 + A-rich Low_complexity Low_complexity 4 67 0 2327 94 0 10 chr2 34432303 34432610 -218823973 - AluSg SINE Alu -6 304 1 406 192 0 14 chr2 34432636 34432709 -218823874 + Tigger1 DNA MER2_type 4 75 -2343 2376 77 3 0 chr2 34432831 34433130 -218823453 + AluSg SINE Alu 5 304 -6 3267 171 52 3 chr2 34433130 34433702 -218822881 - L1MB7 LINE L1 -61 6123 5524 349 239 65 28 chr2 34433703 34433830 -218822753 - MIR SINE MIR -73 135 4 2151 109 0 52 chr2 34434659 34434988 -218821595 - AluSx SINE Alu 0 312 1 192 204 56 0 chr2 34435419 34435473 -218821110 - MIR SINE MIR -104 158 102 26 0 0 0 chr2 34436065 34436091 -218820492 + AT_rich Low_complexity Low_complexity 1 26 0 342 169 0 0 chr2 34437303 34437368 -218819215 + (CACCAT)n Simple_repeat Simple_repeat 4 68 0 2364 75 14 0 chr2 34437473 34437767 -218818816 - AluSp SINE Alu -10 303 6 473 313 51 20 chr2 34438509 34438704 -218817879 + MIR SINE MIR 50 250 -12 1984 126 7 0 chr2 34439285 34439562 -218817021 + AluSx SINE Alu 1 279 -33 1987 125 3 0 chr2 34439707 34439995 -218816588 - AluSx SINE Alu -23 289 1 875 278 51 42 chr2 34439995 34440412 -218816171 - L2 LINE L2 -591 2723 2300 452 352 73 29 chr2 34440499 34440880 -218815703 - L2 LINE L2 -1636 1678 1281 2108 119 7 3 chr2 34441288 34441581 -218815002 + AluSx SINE Alu 1 294 -18 297 346 79 0 chr2 34441590 34441717 -218814866 + L2 LINE L2 2715 2851 -463 214 308 0 0 chr2 34441983 34442035 -218814548 + L2 LINE L2 3262 3313 0 227 387 8 16 chr2 34442500 34442624 -218813959 - L3 LINE CR1 -5 1572 1450 752 232 36 85 chr2 34444923 34445229 -218811354 - L2 LINE L2 -1 3312 3022 398 373 7 13 chr2 34445541 34445691 -218810892 + L2 LINE L2 3123 3271 -1 691 292 21 10 chr2 34446150 34446342 -218810241 + MIR SINE MIR 56 249 -13 1820 152 0 71 chr2 34446556 34446892 -218809691 + AluJb SINE Alu 1 312 0 793 178 81 6 chr2 34448039 34448213 -218808370 - MER53 DNA DNA 0 189 3 2303 97 3 0 chr2 34448297 34448595 -218807988 + AluSg SINE Alu 1 299 -11 261 161 161 81 chr2 34450078 34450165 -218806418 + L2 LINE L2 3220 3313 0 7814 123 38 11 chr2 34450253 34451451 -218805132 - Tigger3b DNA MER2_type 0 1231 1 2223 65 33 0 chr2 34451504 34451780 -218804803 + AluY SINE Alu 1 285 -26 341 309 108 7 chr2 34453017 34453156 -218803427 + MIR SINE MIR 107 259 -3 535 207 241 0 chr2 34453195 34453340 -218803243 + MER5A DNA MER1_type 10 189 0 406 269 60 30 chr2 34453635 34453769 -218802814 + MER5A DNA MER1_type 50 187 -2 312 183 12 37 chr2 34453785 34453867 -218802716 + L2 LINE L2 2199 2278 -1036 209 316 33 72 chr2 34455396 34455450 -218801133 - MER5B DNA MER1_type -7 171 116 2065 87 42 11 chr2 34455450 34455736 -218800847 + AluSc SINE Alu 1 295 -14 209 316 33 72 chr2 34455736 34455833 -218800750 - MER5B DNA MER1_type -62 116 26 2509 70 0 13 chr2 34457056 34457371 -218799212 + AluY SINE Alu 1 311 0 368 347 60 28 chr2 34457414 34457665 -218798918 - L2 LINE L2 -1746 1568 1310 21 36 0 0 chr2 34457787 34457815 -218798768 + GC_rich Low_complexity Low_complexity 1 28 0 431 234 88 22 chr2 34457983 34458120 -218798463 - MIR3 SINE MIR -60 148 3 233 290 58 0 chr2 34459582 34459651 -218796932 + L2 LINE L2 3182 3254 -18 2265 76 24 3 chr2 34460594 34460882 -218795701 + AluY SINE Alu 1 294 -17 201 219 0 0 chr2 34461163 34461204 -218795379 + MIR3 SINE MIR 162 202 -6 216 0 0 0 chr2 34462004 34462028 -218794555 + (T)n Simple_repeat Simple_repeat 1 24 0 236 324 0 28 chr2 34462235 34462306 -218794277 + L2 LINE L2 3163 3231 -41 540 280 13 7 chr2 34463065 34463215 -218793368 - MIR SINE MIR -59 203 53 601 225 46 26 chr2 34463648 34463799 -218792784 + Charlie8 DNA MER1_type 20 173 -2244 336 210 0 0 chr2 34464332 34464394 -218792189 + L2 LINE L2 3250 3311 -2 207 352 38 19 chr2 34464772 34464877 -218791706 + L2 LINE L2 2943 3049 -223 787 274 12 35 chr2 34464963 34465218 -218791365 - MIR SINE MIR -6 256 8 203 349 73 18 chr2 34465326 34465435 -218791148 + L2 LINE L2 3138 3252 -20 1747 141 12 56 chr2 34466026 34466346 -218790237 - AluSg SINE Alu -4 306 1 2288 112 3 10 chr2 34467526 34467840 -218788743 + AluSx SINE Alu 1 312 0 246 317 54 2 chr2 34467862 34467972 -218788611 - MIR SINE MIR -78 130 17 1102 129 129 77 chr2 34468291 34468539 -218788044 - LTR1B LTR ERV1 -211 615 355 336 39 77 19 chr2 34468539 34468591 -218787992 - MLT2A2 LTR ERVL 0 453 399 760 97 0 0 chr2 34468595 34468688 -218787895 + 7SLRNA srpRNA srpRNA 211 303 -17 201 154 0 0 chr2 34468689 34468728 -218787855 + (CA)n Simple_repeat Simple_repeat 2 40 0 2091 116 7 7 chr2 34468751 34469044 -218787539 - AluSx SINE Alu -19 293 1 2110 121 0 0 chr2 34469606 34469923 -218786660 + AluSx SINE Alu 3 319 0 1879 153 0 3 chr2 34470140 34470427 -218786156 + AluJb SINE Alu 1 286 -26 255 265 0 0 chr2 34470568 34470636 -218785947 + G-rich Low_complexity Low_complexity 4 71 0 189 0 0 0 chr2 34471270 34471291 -218785292 + (TC)n Simple_repeat Simple_repeat 2 22 0 * 485 16 16 0 chr2 34471290 34471352 -218785231 + (TG)n Simple_repeat Simple_repeat 2 64 0 237 33 0 0 chr2 34471362 34471392 -218785191 + (TC)n Simple_repeat Simple_repeat 1 30 0 221 167 0 24 chr2 34472084 34472126 -218784457 + (CATA)n Simple_repeat Simple_repeat 3 43 0 492 272 168 8 chr2 34472134 34472449 -218784134 - L1ME LINE L1 -432 5689 5326 23 0 0 0 chr2 34472543 34472566 -218784017 + AT_rich Low_complexity Low_complexity 1 23 0 924 171 0 13 chr2 34472714 34472872 -218783711 + FRAM SINE Alu 11 166 -10 380 248 68 53 chr2 34473055 34473261 -218783322 - L1ME LINE L1 -1371 4775 4567 187 357 132 41 chr2 34473346 34473428 -218783155 + L2 LINE L2 3011 3084 -229 2067 125 0 29 chr2 34473428 34473739 -218782844 - AluSq SINE Alu -11 302 1 1530 185 6 46 chr2 34473743 34474067 -218782516 - AluJo SINE Alu -1 311 1 187 357 132 41 chr2 34474067 34474245 -218782338 + L2 LINE L2 3086 3300 -13 2077 130 7 0 chr2 34474778 34475070 -218781513 + AluSx SINE Alu 1 294 -18 722 193 0 8 chr2 34475457 34475576 -218781007 + AluJb SINE Alu 1 118 -194 26 30 0 0 chr2 34475578 34475611 -218780972 + AT_rich Low_complexity Low_complexity 1 33 0 204 135 0 27 chr2 34475955 34475992 -218780591 + (CA)n Simple_repeat Simple_repeat 1 36 0 464 270 79 42 chr2 34476799 34477040 -218779543 - MIR SINE MIR 0 262 13 230 282 134 74 chr2 34477182 34477331 -218779252 - L3 LINE CR1 -498 1079 922 2138 125 0 0 chr2 34477619 34477915 -218778668 + AluSx SINE Alu 1 296 -16 665 184 0 0 chr2 34478145 34478254 -218778329 + FLAM_A SINE Alu 2 110 -32 21 36 0 0 chr2 34478269 34478297 -218778286 + AT_rich Low_complexity Low_complexity 1 28 0 2244 75 3 0 chr2 34478300 34478582 -218778001 + AluY SINE Alu 1 283 -28 2230 96 3 3 chr2 34479018 34479311 -218777272 - AluY SINE Alu -18 293 1 2927 3 3 0 chr2 34480770 34481084 -218775499 - AluYb8 SINE Alu -3 315 1 312 27 0 0 chr2 34481427 34481464 -218775119 + (CA)n Simple_repeat Simple_repeat 2 38 0 2589 47 0 3 chr2 34481956 34482255 -218774328 + AluY SINE Alu 1 298 -13 309 336 89 7 chr2 34483469 34483615 -218772968 + MIR3 SINE MIR 3 160 -48 1126 148 72 55 chr2 34484401 34484638 -218771945 - L1MB7 LINE L1 -1 6183 5943 21 0 0 0 chr2 34485333 34485354 -218771229 + AT_rich Low_complexity Low_complexity 1 21 0 2244 130 0 0 chr2 34485416 34485723 -218770860 - AluSx SINE Alu -5 307 1 235 261 14 0 chr2 34486373 34486442 -218770141 + (TA)n Simple_repeat Simple_repeat 2 71 0 1918 152 7 10 chr2 34486624 34486927 -218769656 - AluJo SINE Alu -10 302 1 263 28 28 0 chr2 34487549 34487585 -218768998 + (TTTTG)n Simple_repeat Simple_repeat 4 40 0 210 307 158 0 chr2 34488482 34488583 -218768000 - L2 LINE L2 -10 3262 3146 838 181 36 91 chr2 34489138 34489359 -218767224 - MER6B DNA MER2_type 0 210 2 267 31 0 0 chr2 34489367 34489399 -218767184 + (CA)n Simple_repeat Simple_repeat 2 33 0 433 297 55 44 chr2 34490045 34490227 -218766356 + MIR SINE MIR 23 206 -56 2040 100 14 3 chr2 34490387 34490676 -218765907 + AluY SINE Alu 11 302 -9 410 310 19 19 chr2 34491257 34491415 -218765168 + L1MC4 LINE L1 7525 7682 -360 936 175 0 24 chr2 34491425 34491591 -218764992 + FRAM SINE Alu 11 172 -4 2029 118 25 4 chr2 34491641 34491921 -218764662 + AluSx SINE Alu 1 286 -26 192 77 0 0 chr2 34491958 34491984 -218764599 + (CA)n Simple_repeat Simple_repeat 2 27 0 434 186 20 41 chr2 34492504 34492616 -218763967 + MLT1F LTR MaLR 444 540 -2 * 451 97 0 0 chr2 34492616 34492673 -218763910 - LTR37B LTR ERV1 -214 254 198 1085 190 51 42 chr2 34492789 34493005 -218763578 - MER20 DNA MER1_type -1 218 1 844 157 42 30 chr2 34493007 34493173 -218763410 - MER5A DNA MER1_type -20 169 2 306 298 21 0 chr2 34493192 34493286 -218763297 - LTR37B LTR ERV1 -368 100 5 2416 86 3 0 chr2 34493722 34494024 -218762559 + AluSp SINE Alu 1 303 -10 2407 65 0 10 chr2 34494046 34494352 -218762231 + AluY SINE Alu 1 303 -8 969 216 120 10 chr2 34494571 34494863 -218761720 + MER33 DNA MER1_type 1 324 0 951 248 54 29 chr2 34494913 34495155 -218761428 - MIR SINE MIR -10 252 5 477 312 91 56 chr2 34495176 34495606 -218760977 + L1M4 LINE L1 2658 3102 -3044 2603 64 0 6 chr2 34495665 34495978 -218760605 + AluY SINE Alu 1 311 0 203 122 0 49 chr2 34496170 34496211 -218760372 + (CAAAAA)n Simple_repeat Simple_repeat 3 41 0 207 0 0 0 chr2 34498279 34498302 -218758281 + (A)n Simple_repeat Simple_repeat 1 23 0 734 217 0 0 chr2 34498547 34498690 -218757893 + FRAM SINE Alu 1 140 -36 612 53 69 0 chr2 34498707 34498838 -218757745 + (TA)n Simple_repeat Simple_repeat 1 140 0 835 95 17 0 chr2 34499979 34500095 -218756488 - MER41A LTR ERV1 -265 289 172 195 167 0 0 chr2 34500286 34500328 -218756255 + (TGAA)n Simple_repeat Simple_repeat 4 45 0 3301 100 30 22 chr2 34500635 34501213 -218755370 - MER41A LTR ERV1 0 635 21 1706 142 3 30 chr2 34501213 34501509 -218755074 + AluJb SINE Alu 13 300 -12 2894 3 0 0 chr2 34502016 34502324 -218754259 - AluYa5 SINE Alu -3 308 1 2047 76 0 0 chr2 34503185 34503447 -218753136 - AluY SINE Alu -49 262 1 519 220 262 0 chr2 34503619 34503760 -218752823 + MER45A DNA AcHobo 1 178 0 459 126 147 11 chr2 34504245 34504340 -218752243 - MER53 DNA DNA 0 189 82 447 216 24 0 chr2 34504394 34504519 -218752064 - MER53 DNA DNA -55 134 7 12783 122 38 19 chr2 34504670 34505530 -218751053 - Tigger4(Zombi) DNA MER2_type 0 2731 1889 2068 133 7 0 chr2 34505530 34505830 -218750753 + AluSx SINE Alu 1 302 -10 12783 122 38 19 chr2 34505830 34505911 -218750672 - Tigger4(Zombi) DNA MER2_type -842 1889 1811 2169 93 26 16 chr2 34505911 34506221 -218750362 + AluSq SINE Alu 1 313 0 12783 122 38 19 chr2 34506221 34507300 -218749283 - Tigger4(Zombi) DNA MER2_type -920 1811 672 2254 94 10 19 chr2 34507309 34507616 -218748967 - AluSx SINE Alu -8 304 1 297 217 0 0 chr2 34507618 34507678 -218748905 + Tigger1 DNA MER2_type 2359 2418 0 282 257 18 26 chr2 34507678 34507791 -218748792 - MIR SINE MIR -27 235 124 477 164 58 19 chr2 34507808 34507912 -218748671 - L1MB7 LINE L1 -19 6165 6058 762 164 164 11 chr2 34507919 34508126 -218748457 - MER33 DNA MER1_type -96 228 1 409 253 53 33 chr2 34508139 34508289 -218748294 - L1MD2 LINE L1 -1 6358 6206 5484 146 29 14 chr2 34508339 34509985 -218746598 - L1PB1 LINE L1 -3 6148 4476 278 300 104 56 chr2 34510129 34510295 -218746288 + L1MC4a LINE L1 3876 4033 -2113 1535 166 50 14 chr2 34510295 34510573 -218746010 - AluJb SINE Alu -20 292 5 278 300 104 56 chr2 34510573 34511012 -218745571 + L1MC4a LINE L1 4033 4510 -1636 688 285 94 47 chr2 34511717 34511887 -218744696 + L1MC4a LINE L1 5254 5415 -2393 1647 149 47 24 chr2 34511887 34512183 -218744400 + AluJb SINE Alu 1 303 -9 688 285 94 47 chr2 34512183 34512395 -218744188 + L1MC4a LINE L1 5415 5654 -2154 631 259 146 0 chr2 34512449 34512634 -218743949 - MIR SINE MIR -32 230 19 537 312 55 7 chr2 34512642 34512934 -218743649 + L1MC4a LINE L1 5646 5951 -1857 2313 96 0 0 chr2 34513122 34513414 -218743169 + AluSq SINE Alu 1 292 -21 180 77 0 0 chr2 34513417 34513443 -218743140 + (TAA)n Simple_repeat Simple_repeat 2 27 0 962 221 53 0 chr2 34513923 34514149 -218742434 - Charlie2a DNA MER1_type -1892 970 733 260 186 136 0 chr2 34514262 34514321 -218742262 - Charlie2a DNA MER1_type -2634 148 82 2159 106 16 0 chr2 34514438 34514741 -218741842 - AluSx SINE Alu -4 308 1 1492 147 88 53 chr2 34514744 34515029 -218741554 - AluJo SINE Alu -17 295 1 1839 138 10 7 chr2 34515104 34515400 -218741183 + AluSc SINE Alu 1 297 -12 335 307 147 13 chr2 34515819 34515969 -218740614 - MIR SINE MIR -17 245 76 1530 151 40 4 chr2 34516606 34516858 -218739725 + AluJo SINE Alu 1 261 -51 1100 172 92 44 chr2 34517091 34517318 -218739265 + MER8 DNA MER2_type 1 238 -1 442 275 23 23 chr2 34517511 34517642 -218738941 + MIR SINE MIR 28 158 -104 204 182 146 18 chr2 34518493 34518548 -218738035 + L2 LINE L2 3206 3267 -5 2264 103 7 0 chr2 34518557 34518867 -218737716 - AluSq SINE Alu -1 312 1 4899 101 10 10 chr2 34520122 34520793 -218735790 + L1PA14 LINE L1 5488 6158 -3 251 203 0 0 chr2 34523001 34523060 -218733523 + (CCA)n Simple_repeat Simple_repeat 1 59 0 386 148 16 0 chr2 34525611 34525672 -218730911 + L2 LINE L2 3252 3313 0 981 176 11 0 chr2 34527832 34528008 -218728575 + MER58A DNA MER1_type 47 224 0 1529 204 13 23 chr2 34530452 34530756 -218725827 - AluJo SINE Alu -7 305 5 315 346 69 23 chr2 34530918 34531135 -218725448 + L2 LINE L2 2840 3066 -206 1868 161 3 3 chr2 34531209 34531508 -218725075 + AluSx SINE Alu 1 299 -13 784 231 113 29 chr2 34532046 34532284 -218724299 + MIR SINE MIR 2 259 -3 1766 115 19 0 chr2 34532365 34532634 -218723949 + L1PA8A LINE L1 5858 6131 0 291 54 0 0 chr2 34532664 34532701 -218723882 + (CA)n Simple_repeat Simple_repeat 2 38 0 342 273 23 0 chr2 34532704 34532792 -218723791 - L1MC4 LINE L1 -1339 6703 6614 180 0 0 0 chr2 34532794 34532814 -218723769 + (CA)n Simple_repeat Simple_repeat 2 21 0 289 176 0 0 chr2 34534163 34534214 -218722369 - AluJo SINE Alu -10 292 242 314 171 13 53 chr2 34534215 34534291 -218722292 - AluJo SINE Alu -143 159 87 26 0 0 0 chr2 34534482 34534508 -218722075 + AT_rich Low_complexity Low_complexity 1 26 0 2374 83 0 3 chr2 34534697 34534998 -218721585 + AluY SINE Alu 1 300 -11 256 224 0 0 chr2 34535230 34535279 -218721304 - L2 LINE L2 0 3313 3265 749 183 0 0 chr2 34535300 34535431 -218721152 + FLAM_A SINE Alu 1 131 -2 2604 64 0 0 chr2 34538739 34539050 -218717533 - AluY SINE Alu 0 311 1 221 354 39 23 chr2 34539169 34539299 -218717284 - MIR SINE MIR -111 151 20 480 263 19 39 chr2 34539993 34540149 -218716434 + L3 LINE CR1 1358 1510 -67 812 165 0 23 chr2 34540238 34540371 -218716212 + FLAM_C SINE Alu 1 130 -13 1424 153 94 21 chr2 34541144 34541431 -218715152 - AluJb SINE Alu -4 308 1 22 0 0 0 chr2 34541504 34541526 -218715057 + AT_rich Low_complexity Low_complexity 1 22 0 1723 195 107 19 chr2 34541580 34542011 -218714572 - MLT1D LTR MaLR -16 489 21 23 33 0 0 chr2 34542218 34542248 -218714335 + AT_rich Low_complexity Low_complexity 1 30 0 207 0 0 0 chr2 34542806 34542829 -218713754 + (TA)n Simple_repeat Simple_repeat 1 23 0 242 259 0 0 chr2 34542830 34542884 -218713699 + (CA)n Simple_repeat Simple_repeat 1 54 0 408 254 61 56 chr2 34543085 34543298 -218713285 + Charlie8 DNA MER1_type 36 249 -2168 314 337 135 34 chr2 34543424 34543691 -218712892 + L2 LINE L2 2821 3114 -158 579 251 86 38 chr2 34543769 34544036 -218712547 - LTR8A LTR ERV1 0 727 448 262 253 46 23 chr2 34544067 34544154 -218712429 - LTR8A LTR ERV1 -349 378 290 2648 51 0 0 chr2 34544229 34544540 -218712043 - AluY SINE Alu 0 311 1 513 224 34 54 chr2 34544690 34544837 -218711746 - LTR8 LTR ERV1 -547 144 1 247 292 73 21 chr2 34544932 34545028 -218711555 - MER5A DNA MER1_type -1 188 88 1875 140 3 16 chr2 34545109 34545417 -218711166 - AluJb SINE Alu -8 304 1 3142 134 87 30 chr2 34545550 34546220 -218710363 - LTR8A LTR ERV1 0 691 1 2604 123 17 55 chr2 34546951 34547567 -218709016 + MER4B LTR ERV1 1 779 0 479 171 96 20 chr2 34547617 34547763 -218708820 + MER105 DNA DNA 4 160 -44 635 250 60 33 chr2 34547814 34547998 -218708585 - MER5A DNA MER1_type 0 189 1 2522 183 66 52 chr2 34548115 34548281 -218708302 + LTR8A LTR ERV1 1 163 -564 3465 100 47 4 chr2 34548281 34548771 -218707812 + MER9 LTR ERVK 1 511 0 2522 183 66 52 chr2 34548771 34549048 -218707535 + LTR8A LTR ERV1 163 435 -292 4658 116 30 11 chr2 34549048 34549813 -218706770 - LTR17 LTR ERV1 0 780 1 2522 183 66 52 chr2 34549813 34550085 -218706498 + LTR8A LTR ERV1 435 727 0 21437 142 56 64 chr2 34550085 34555286 -218701297 + HUERS-P1 LTR ERV1 1 5491 -772 4992 76 34 3 chr2 34555286 34555955 -218700628 - LTR8 LTR ERV1 0 691 2 21437 142 56 64 chr2 34555955 34556621 -218699962 + HUERS-P1 LTR ERV1 5491 6161 -102 1897 145 44 8 chr2 34556636 34557001 -218699582 - LTR24C LTR ERV1 -257 378 1 2136 161 102 9 chr2 34557531 34557953 -218698630 - LOR1b LTR ERV1 0 461 1 405 319 117 50 chr2 34558307 34558519 -218698064 - L2 LINE L2 -816 2498 2302 1891 161 17 0 chr2 34558519 34558811 -218697772 + AluJb SINE Alu 1 297 -15 405 319 117 50 chr2 34558811 34558974 -218697609 - L2 LINE L2 -1012 2302 2098 2357 81 0 0 chr2 34559540 34559837 -218696746 + AluY SINE Alu 1 297 -14 1293 216 42 14 chr2 34559945 34560232 -218696351 + AluJo SINE Alu 1 295 -17 2292 91 13 0 chr2 34560238 34560545 -218696038 + AluSq SINE Alu 1 311 -2 21 0 0 0 chr2 34560554 34560575 -218696008 + AT_rich Low_complexity Low_complexity 1 21 0 460 311 68 48 chr2 34560795 34561146 -218695437 - HERVL LTR ERVL -3412 2242 1885 1299 190 57 14 chr2 34561160 34561513 -218695070 + L1ME3A LINE L1 5791 6158 -12 768 239 42 78 chr2 34561502 34561621 -218694962 - L1ME LINE L1 -458 5706 5584 * 1651 167 47 23 chr2 34561621 34561920 -218694663 - AluJo SINE Alu -6 306 1 768 239 42 78 chr2 34561920 34562135 -218694448 - L1ME LINE L1 -580 5584 5384 219 250 0 0 chr2 34562142 34562190 -218694393 + MIR SINE MIR 205 252 -10 821 268 53 0 chr2 34562356 34562602 -218693981 + MIR SINE MIR 4 262 0 263 109 22 43 chr2 34562721 34562786 -218693797 - Alu SINE Alu 0 301 242 * 877 224 53 99 chr2 34562774 34563279 -218693304 + MER34 LTR ERV1 61 542 0 23 33 0 0 chr2 34564797 34564827 -218691756 + AT_rich Low_complexity Low_complexity 1 30 0 349 222 108 57 chr2 34565004 34565270 -218691313 - MER34C LTR ERV1 0 594 378 315 208 0 0 chr2 34565434 34565507 -218691076 - MER34C LTR ERV1 -469 101 1 2324 112 0 0 chr2 34565980 34566284 -218690299 - AluSx SINE Alu -8 304 1 2103 136 91 18 chr2 34567707 34568104 -218688479 + MSTA LTR MaLR 1 426 -2 259 310 124 16 chr2 34568392 34568521 -218688062 - MIR3 SINE MIR -48 160 18 3020 141 20 0 chr2 34568762 34569323 -218687260 - L1 LINE L1 -1503 4643 4072 342 272 34 7 chr2 34569454 34569601 -218686982 - HAL1 LINE L1 -1045 1462 1312 1381 156 12 8 chr2 34569664 34569921 -218686662 - L1MB3 LINE L1 -1 6182 5925 250 146 0 0 chr2 34569921 34569962 -218686621 - MLT2B1 LTR ERVL 0 520 480 255 103 0 0 chr2 34569962 34570001 -218686582 + (TG)n Simple_repeat Simple_repeat 2 40 0 256 81 0 0 chr2 34570090 34570127 -218686456 - MLT2D LTR ERVL -118 296 260 648 168 8 8 chr2 34570153 34570272 -218686311 + FLAM_A SINE Alu 21 139 -3 433 106 0 0 chr2 34570287 34570353 -218686230 - L1MB3 LINE L1 -252 5928 5863 421 144 22 0 chr2 34570366 34570456 -218686127 + CT-rich Low_complexity Low_complexity 3 94 0 708 211 8 0 chr2 34570564 34570697 -218685886 - AluJo SINE Alu -176 136 3 194 224 75 30 chr2 34571333 34571400 -218685183 + L2 LINE L2 3144 3213 -100 340 68 0 0 chr2 34571667 34571711 -218684872 - MER57B LTR ERV1 -65 369 326 1389 181 56 47 chr2 34572909 34573205 -218683378 - MLT1A1 LTR MaLR 0 365 64 2196 132 3 0 chr2 34573205 34573516 -218683067 - AluSx SINE Alu 0 312 1 1389 181 56 47 chr2 34573516 34573579 -218683004 - MLT1A1 LTR MaLR -301 64 3 834 266 95 4 chr2 34574547 34574810 -218681773 + MLT1L LTR MaLR 3 289 -326 216 396 0 0 chr2 34575483 34575647 -218680936 + (TGG)n Simple_repeat Simple_repeat 3 166 0 893 252 62 0 chr2 34576173 34576431 -218680152 + MLT1L LTR MaLR 270 543 -72 232 170 38 0 chr2 34576583 34576636 -218679947 - AluSq SINE Alu -1 301 247 2101 134 0 3 chr2 34576940 34577238 -218679345 - AluSx SINE Alu -15 297 1 316 308 30 15 chr2 34577259 34577392 -218679191 + MIR SINE MIR 100 234 -28 227 225 110 75 chr2 34577474 34577647 -218678936 + LTR16A1 LTR ERVL 60 238 -219 1802 112 0 0 chr2 34577665 34577906 -218678677 - AluSq SINE Alu -72 241 1 717 131 10 0 chr2 34577939 34578038 -218678545 + FLAM_C SINE Alu 26 125 -18 2263 249 52 30 chr2 34578059 34578371 -218678212 - L1MEc LINE L1 -2748 4209 3905 2329 105 0 10 chr2 34578371 34578684 -218677899 - AluSx SINE Alu -2 310 1 2263 249 52 30 chr2 34578684 34578774 -218677809 - L1MEc LINE L1 -3052 3905 3818 2602 160 113 66 chr2 34578774 34578958 -218677625 + LTR29 LTR ERV1 1 175 -447 1617 194 0 7 chr2 34578958 34579236 -218677347 + AluJo SINE Alu 1 276 -36 180 0 0 0 chr2 34579241 34579261 -218677322 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2602 160 113 66 chr2 34579261 34579664 -218676919 + LTR29 LTR ERV1 178 622 0 2263 249 52 30 chr2 34579664 34580107 -218676476 - L1MEc LINE L1 -3139 3818 3344 599 249 80 50 chr2 34580151 34580527 -218676056 - MER21B LTR ERV1 -57 806 348 1952 134 7 7 chr2 34580554 34580887 -218675696 - AluSx SINE Alu 0 333 1 1079 253 53 61 chr2 34580899 34581292 -218675291 - L1MEc LINE L1 -3969 3169 2783 2112 149 131 18 chr2 34581292 34581682 -218674901 - Tigger2a DNA MER2_type 0 434 1 1079 253 53 61 chr2 34581682 34581991 -218674592 - L1MEc LINE L1 -4355 2783 2473 2061 259 42 55 chr2 34582150 34582336 -218674247 - L1MEc LINE L1 -4544 2415 2228 2255 86 0 14 chr2 34582336 34582665 -218673918 - AluSp SINE Alu 0 325 1 2061 259 42 55 chr2 34582665 34582824 -218673759 - L1MEc LINE L1 -4731 2228 2068 2220 153 0 61 chr2 34582824 34583183 -218673400 + MER1B DNA MER1_type 1 337 0 2061 259 42 55 chr2 34583183 34583852 -218672731 - L1MEc LINE L1 -4891 2068 1412 1140 165 15 92 chr2 34583852 34584112 -218672471 + MER65A LTR ERV1 2 241 -204 1033 179 49 0 chr2 34584107 34584291 -218672292 - THE1B LTR MaLR -171 193 1 * 1904 238 69 30 chr2 34584291 34584782 -218671801 - L1MEc LINE L1 -6339 520 11 988 119 0 0 chr2 34585162 34585288 -218671295 + FLAM_C SINE Alu 1 126 -7 2246 122 0 13 chr2 34585843 34586155 -218670428 + AluJo SINE Alu 1 308 -4 1734 182 106 34 chr2 34586285 34586356 -218670227 + LTR8A LTR ERV1 290 355 -372 2093 123 3 37 chr2 34586356 34586680 -218669903 - AluSp SINE Alu 0 313 1 1734 182 106 34 chr2 34586680 34587015 -218669568 + LTR8A LTR ERV1 355 725 -2 1753 161 11 14 chr2 34587315 34587601 -218668982 + AluJo SINE Alu 7 291 -21 243 0 0 0 chr2 34587601 34587628 -218668955 + (GA)n Simple_repeat Simple_repeat 2 28 0 654 233 47 35 chr2 34588032 34588204 -218668379 - MER5B DNA MER1_type -1 177 4 847 296 105 19 chr2 34589081 34589395 -218667188 + L3 LINE CR1 1135 1475 -102 2139 168 27 37 chr2 34589438 34589455 -218667128 - MER31A LTR ERV1 0 485 469 957 96 44 0 chr2 34589455 34589590 -218666993 + L1PA12 LINE L1 6028 6168 0 2139 168 27 37 chr2 34589590 34590059 -218666524 - MER31A LTR ERV1 -16 469 4 378 226 19 0 chr2 34590478 34590563 -218666020 - MER67A LTR ERV1 -374 92 4 431 254 56 42 chr2 34591213 34591355 -218665228 + MIR SINE MIR 67 210 -52 780 28 28 0 chr2 34592211 34592318 -218664265 + (TCTA)n Simple_repeat Simple_repeat 1 110 0 1824 160 0 20 chr2 34592375 34592668 -218663915 - AluJo SINE Alu -25 287 1 2763 169 75 24 chr2 34592748 34593297 -218663286 + LTR28 LTR ERV1 1 577 -443 364 197 0 15 chr2 34593359 34593425 -218663158 + LTR28 LTR ERV1 954 1018 -2 6953 171 64 30 chr2 34593493 34594891 -218661692 + LTR28-int LTR ERV1 206 4766 -451 498 195 0 11 chr2 34594905 34594992 -218661591 + HERV17 LTR ERV1 3910 3995 -885 2533 154 21 46 chr2 34594992 34595290 -218661293 + HERV17 LTR ERV1 990 1273 -4673 3662 24 17 0 chr2 34595290 34595699 -218660884 + L1PA3 LINE L1 5740 6155 0 2533 154 21 46 chr2 34595699 34595874 -218660709 + HERV17 LTR ERV1 1273 1451 -4495 * 2781 121 0 15 chr2 34595865 34596262 -218660321 + HERV17 LTR ERV1 2218 2608 -4929 3443 86 60 16 chr2 34596263 34596766 -218659817 + LTR17 LTR ERV1 256 780 0 5418 72 6 18 chr2 34596766 34597471 -218659112 + HERV17 LTR ERV1 1 696 -7930 9640 69 6 3 chr2 34597619 34598822 -218657761 + HERV17 LTR ERV1 802 2007 -6619 * 29770 45 14 6 chr2 34598814 34600761 -218655822 + HERV17 LTR ERV1 2430 4419 -4207 2361 98 3 0 chr2 34600761 34601058 -218655525 - AluY SINE Alu -13 298 1 29770 45 14 6 chr2 34601058 34602672 -218653911 + HERV17 LTR ERV1 4419 6019 -2607 2367 69 3 0 chr2 34602693 34602984 -218653599 + HERV17 LTR ERV1 8335 8626 0 2452 58 55 0 chr2 34602984 34603293 -218653290 + LTR17 LTR ERV1 1 326 -454 10742 132 35 19 chr2 34603298 34605291 -218651292 + HERV17 LTR ERV1 2244 6995 -1 2778 164 81 22 chr2 34605292 34605852 -218650731 + LTR28 LTR ERV1 1 1231 -446 307 260 0 14 chr2 34605893 34605966 -218650617 + LTR28 LTR ERV1 949 1020 0 219 221 0 35 chr2 34606445 34606531 -218650052 + (TTTA)n Simple_repeat Simple_repeat 2 84 0 1603 181 7 27 chr2 34606599 34606898 -218649685 - AluJb SINE Alu -19 293 1 912 136 0 0 chr2 34607183 34607308 -218649275 + FLAM_C SINE Alu 3 127 -6 2007 107 44 0 chr2 34607748 34608065 -218648518 + AluY SINE Alu 1 329 0 461 248 16 16 chr2 34608274 34608399 -218648184 - L1MC4a LINE L1 -1892 5916 5792 227 295 65 42 chr2 34608459 34608654 -218647929 - L1MC4a LINE L1 -1501 4645 4456 2064 129 3 3 chr2 34608654 34608948 -218647635 - AluSx SINE Alu -18 294 1 227 295 65 42 chr2 34608948 34609277 -218647306 - L1MC4a LINE L1 -1690 4456 4076 25 75 0 0 chr2 34610954 34611007 -218645576 + AT_rich Low_complexity Low_complexity 1 53 0 686 147 9 0 chr2 34611758 34611874 -218644709 + MER97c DNA MER1_type? 53 169 -921 337 242 121 0 chr2 34611971 34612062 -218644521 + MLT1L LTR MaLR 486 587 -28 2015 150 0 0 chr2 34612535 34612835 -218643748 - AluJb SINE Alu -12 300 1 827 165 0 0 chr2 34613560 34613687 -218642896 + FRAM SINE Alu 1 127 -49 709 168 0 67 chr2 34613893 34614042 -218642541 - FRAM SINE Alu 0 176 38 1149 276 47 5 chr2 34614170 34614575 -218642008 + Charlie4a DNA MER1_type 81 502 -6 678 179 0 0 chr2 34615060 34615166 -218641417 + Tigger3(Golem) DNA MER2_type 1 106 -2923 3746 124 68 47 chr2 34615168 34615216 -218641367 + Tigger3(Golem) DNA MER2_type 2306 2352 -677 2074 116 33 7 chr2 34615216 34615518 -218641065 - AluSx SINE Alu -2 310 1 3746 124 68 47 chr2 34615518 34615707 -218640876 + Tigger3(Golem) DNA MER2_type 2352 2536 -493 2390 85 3 10 chr2 34615707 34616013 -218640570 - AluY SINE Alu -5 306 3 3746 124 68 47 chr2 34616013 34616046 -218640537 + Tigger3(Golem) DNA MER2_type 2536 2567 -462 2303 74 3 0 chr2 34616046 34616374 -218640209 + AluSp SINE Alu 1 329 0 3746 124 68 47 chr2 34616374 34616809 -218639774 + Tigger3(Golem) DNA MER2_type 2567 3029 0 904 39 45 34 chr2 34617784 34617962 -218638621 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 2321 94 7 0 chr2 34618375 34618684 -218637899 - AluSp SINE Alu -2 311 1 2845 261 138 26 chr2 34619083 34619940 -218636643 - MER45C DNA AcHobo 0 953 1 555 258 148 25 chr2 34621361 34621605 -218634978 + L2 LINE L2 3040 3313 0 10032 179 36 18 chr2 34621637 34624477 -218632106 - L1MA4 LINE L1 -3 7587 4800 2512 83 0 0 chr2 34624477 34624779 -218631804 + AluY SINE Alu 2 303 -8 10032 179 36 18 chr2 34624779 34625986 -218630597 - L1MA4 LINE L1 -2790 4800 4798 189 0 0 0 chr2 34625986 34626007 -218630576 + (TTAGG)n Simple_repeat Simple_repeat 5 25 0 10032 179 36 18 chr2 34626007 34626547 -218630036 - L1MA4 LINE L1 -2792 4798 4269 751 293 61 34 chr2 34626520 34627248 -218629335 - L1MA4 LINE L1 -3901 3664 2912 * 2370 100 0 0 chr2 34627248 34627547 -218629036 - AluSx SINE Alu -13 299 1 751 293 61 34 chr2 34627547 34627594 -218628989 - L1MA4 LINE L1 -4653 2912 2868 243 0 0 0 chr2 34627605 34627632 -218628951 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 647 206 0 0 chr2 34627640 34627747 -218628836 - FLAM_A SINE Alu -35 107 1 1659 233 35 41 chr2 34627753 34628156 -218628427 - L1M4c LINE L1 -4781 1603 1199 10118 170 18 17 chr2 34628156 34629158 -218627425 - L1PA14 LINE L1 -2 6159 5160 2157 116 13 0 chr2 34629158 34629461 -218627122 - AluSp SINE Alu -6 307 1 10118 170 18 17 chr2 34629461 34630814 -218625769 - L1PA14 LINE L1 -1001 5160 3810 2539 92 20 0 chr2 34630814 34631162 -218625421 - THE1A LTR MaLR 0 355 1 11211 97 12 21 chr2 34631164 34632756 -218623827 - THE1A-int LTR MaLR -2 1578 1 2694 93 3 0 chr2 34632756 34633109 -218623474 - THE1A LTR MaLR 0 355 2 10118 170 18 17 chr2 34633109 34633566 -218623017 - L1PA14 LINE L1 -2350 3811 3337 1659 233 35 41 chr2 34633566 34633728 -218622855 - L1M4c LINE L1 -5185 1199 1041 1106 217 25 52 chr2 34633721 34634007 -218622576 - L1M4c LINE L1 -5611 692 415 * 792 246 39 0 chr2 34636017 34636224 -218620359 + L1M4 LINE L1 14 228 -6314 2191 234 38 15 chr2 34636224 34636437 -218620146 + L1M4 LINE L1 1403 1610 -5036 2185 131 22 33 chr2 34636437 34636803 -218619780 + THE1B LTR MaLR 3 364 0 2191 234 38 15 chr2 34636803 34637250 -218619333 + L1M4 LINE L1 1610 2078 -4568 807 275 27 27 chr2 34637240 34637723 -218618860 + L1M4 LINE L1 3618 4100 -2544 * 1119 259 97 8 chr2 34637733 34638104 -218618479 + MLT1D LTR MaLR 16 419 -86 713 249 69 4 chr2 34638166 34638399 -218618184 + L1M4 LINE L1 4522 4769 -1875 6983 237 25 61 chr2 34638406 34640455 -218616128 + L1PA13 LINE L1 3 1978 -4809 2426 75 0 10 chr2 34640455 34640762 -218615821 + AluY SINE Alu 1 304 -7 895 188 7 0 chr2 34640767 34640921 -218615662 + FRAM SINE Alu 3 157 -19 1792 194 62 60 chr2 34641179 34641683 -218614900 - MLT1D LTR MaLR 0 505 1 312 70 0 0 chr2 34641909 34641952 -218614631 + (CCAA)n Simple_repeat Simple_repeat 2 44 0 356 316 102 26 chr2 34644855 34645056 -218611527 - MIR SINE MIR -48 214 3 2780 77 0 0 chr2 34645508 34645861 -218610722 + THE1A LTR MaLR 1 353 -2 353 292 164 37 chr2 34646257 34646555 -218610028 - L2 LINE L2 -351 2963 2628 2345 72 14 0 chr2 34646608 34646898 -218609685 - AluY SINE Alu -17 294 1 1099 191 5 14 chr2 34646953 34647162 -218609421 - AluJo SINE Alu -18 294 88 566 258 194 26 chr2 34647210 34647551 -218609032 - LTR16A LTR ERVL -1 449 52 707 286 107 30 chr2 34647669 34648032 -218608551 + L2 LINE L2 2923 3313 0 2289 100 17 7 chr2 34648136 34648437 -218608146 + AluSp SINE Alu 1 304 -9 216 0 0 0 chr2 34648583 34648607 -218607976 + (T)n Simple_repeat Simple_repeat 1 24 0 1864 95 114 4 chr2 34649422 34649686 -218606897 + AluSg SINE Alu 1 293 -17 2026 117 37 3 chr2 34649691 34649990 -218606593 + AluSc SINE Alu 1 309 0 2109 141 3 0 chr2 34650002 34650308 -218606275 + AluSp SINE Alu 1 307 -6 371 324 119 11 chr2 34650308 34650475 -218606108 + L3 LINE CR1 1381 1569 -8 23 68 0 0 chr2 34650699 34650743 -218605840 + AT_rich Low_complexity Low_complexity 1 44 0 1072 231 112 62 chr2 34650787 34651437 -218605146 - HAL1 LINE L1 -100 2407 1725 2741 126 45 56 chr2 34651437 34652050 -218604533 + MER4B LTR ERV1 1 770 -9 688 231 71 52 chr2 34652101 34652370 -218604213 - HAL1 LINE L1 -836 1671 1398 3753 88 37 45 chr2 34652376 34652604 -218603979 - MER4E LTR ERV1 0 779 551 2999 66 8 2 chr2 34652604 34652997 -218603586 + L1PA7 LINE L1 5760 6154 0 3753 88 37 45 chr2 34652997 34653584 -218602999 - MER4E LTR ERV1 -228 551 1 1658 272 82 52 chr2 34653584 34654152 -218602431 - HAL1 LINE L1 -1126 1381 832 1558 176 74 3 chr2 34654152 34654436 -218602147 + AluJb SINE Alu 1 304 -8 1658 272 82 52 chr2 34654436 34654844 -218601739 - HAL1 LINE L1 -1675 832 438 1927 108 3 76 chr2 34654844 34655159 -218601424 - AluSx SINE Alu -20 292 1 1714 191 3 0 chr2 34655159 34655452 -218601131 - AluJo SINE Alu -17 295 1 1658 272 82 52 chr2 34655452 34655546 -218601037 - HAL1 LINE L1 -2068 439 240 1004 332 76 23 chr2 34656094 34656930 -218599653 - L2 LINE L2 -1 3271 2391 188 294 10 108 chr2 34656993 34657095 -218599488 + L2 LINE L2 3137 3228 -44 2284 116 0 0 chr2 34657182 34657493 -218599090 + AluY SINE Alu 1 311 0 363 377 80 14 chr2 34658436 34658712 -218597871 + L2 LINE L2 2977 3270 -2 373 224 17 43 chr2 34658778 34658894 -218597689 - MLT1J2 LTR MaLR -18 432 320 718 226 37 46 chr2 34659052 34659269 -218597314 - L2 LINE L2 0 3313 3099 1413 270 58 66 chr2 34659360 34660134 -218596449 - L2 LINE L2 -1002 2312 1545 211 372 41 33 chr2 34660483 34660604 -218595979 + L2 LINE L2 3102 3223 -49 552 242 22 28 chr2 34662808 34662986 -218593597 + MER5B DNA MER1_type 1 177 -1 511 270 51 0 chr2 34663565 34663743 -218592840 + MIR SINE MIR 76 262 0 21 0 0 31 chr2 34663903 34663922 -218592661 + AT_rich Low_complexity Low_complexity 1 20 -11 279 0 0 0 chr2 34663922 34663953 -218592630 + (CA)n Simple_repeat Simple_repeat 2 32 0 21 0 0 31 chr2 34663953 34663965 -218592618 + AT_rich Low_complexity Low_complexity 20 31 0 2102 91 10 10 chr2 34664135 34664433 -218592150 - AluSq SINE Alu -12 301 4 2074 126 7 0 chr2 34664436 34664738 -218591845 - AluSx SINE Alu -8 304 1 189 0 0 0 chr2 34664743 34664764 -218591819 + (T)n Simple_repeat Simple_repeat 1 21 0 1402 111 43 5 chr2 34714954 34715161 -218541422 + AluSp SINE Alu 84 298 -15 2047 101 30 7 chr2 34715353 34715650 -218540933 + AluSg SINE Alu 1 304 -6 32 0 0 0 chr2 34716218 34716250 -218540333 + AT_rich Low_complexity Low_complexity 1 32 0 3849 137 25 2 chr2 34716341 34716970 -218539613 - L1PA15 LINE L1 -8 6157 5514 * 7539 24 2 10 chr2 34716969 34718636 -218537947 - L1PA4 LINE L1 0 6155 4488 3833 206 2 16 chr2 34718838 34719714 -218536869 - L1PA15 LINE L1 -1158 4988 4125 2466 83 0 0 chr2 34719909 34720210 -218536373 + AluY SINE Alu 1 301 -10 378 229 102 101 chr2 34720210 34720420 -218536163 - L1ME1 LINE L1 -217 5949 5743 458 260 27 41 chr2 34721080 34721226 -218535357 + MIR SINE MIR 13 156 -106 1850 158 38 20 chr2 34721235 34721582 -218535001 + MLT1A1 LTR MaLR 2 354 -11 505 253 0 31 chr2 34721799 34721961 -218534622 + MER103 DNA DNA 8 164 -2 26 30 0 0 chr2 34722283 34722316 -218534267 + AT_rich Low_complexity Low_complexity 1 33 0 324 103 0 0 chr2 34723254 34723312 -218533271 + (TC)n Simple_repeat Simple_repeat 1 58 0 2574 101 25 3 chr2 34724671 34725038 -218531545 + THE1C LTR MaLR 1 375 0 190 347 54 90 chr2 34725234 34725401 -218531182 - L2 LINE L2 -42 3230 3070 807 223 167 37 chr2 34725559 34725882 -218530701 - MLT1A1 LTR MaLR 0 365 1 265 285 21 124 chr2 34726008 34726194 -218530389 - MIR3 SINE MIR -33 175 9 344 308 75 8 chr2 34726815 34726948 -218529635 - MIR SINE MIR -28 234 93 243 115 7 79 chr2 34727673 34727812 -218528771 + (CCCCCA)n Simple_repeat Simple_repeat 4 132 0 331 270 127 0 chr2 34728513 34728639 -218527944 - MIR SINE MIR -3 259 118 2085 125 0 10 chr2 34728719 34729016 -218527567 + AluSx SINE Alu 1 294 -18 192 214 20 122 chr2 34729753 34729851 -218526732 + MIR SINE MIR 123 210 -52 2180 125 0 3 chr2 34729985 34730297 -218526286 + AluSx SINE Alu 1 311 -1 22 80 0 0 chr2 34730443 34730493 -218526090 + AT_rich Low_complexity Low_complexity 1 50 0 269 221 48 55 chr2 34730642 34730759 -218525824 - L1ME LINE L1 -318 5844 5724 860 143 0 8 chr2 34731039 34731165 -218525418 - FLAM_C SINE Alu -18 125 1 468 310 52 24 chr2 34732472 34732685 -218523898 + L2 LINE L2 411 629 -2685 22 0 0 0 chr2 34732706 34732728 -218523855 + AT_rich Low_complexity Low_complexity 1 22 0 2236 79 38 0 chr2 34732788 34733079 -218523504 + AluY SINE Alu 1 302 -9 1081 111 25 30 chr2 34733080 34733278 -218523305 + AluY SINE Alu 1 197 -114 448 190 90 0 chr2 34733499 34733599 -218522984 + MER53 DNA DNA 1 109 -80 520 117 43 32 chr2 34733685 34733779 -218522804 + MER53 DNA DNA 95 189 0 2119 116 7 13 chr2 34733928 34734231 -218522352 + AluSq SINE Alu 1 301 -12 853 178 0 0 chr2 34734285 34734414 -218522169 + FLAM_C SINE Alu 5 133 0 2210 129 3 0 chr2 34734449 34734760 -218521823 + AluSx SINE Alu 1 312 0 192 40 0 0 chr2 34734890 34734915 -218521668 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 2179 94 35 0 chr2 34734953 34735240 -218521343 + AluY SINE Alu 1 297 -14 183 200 89 0 chr2 34735300 34735345 -218521238 - MIR SINE MIR -131 131 83 1518 154 4 4 chr2 34735411 34735657 -218520926 - Tigger5 DNA MER2_type 0 2323 2078 240 216 59 0 chr2 34735647 34735698 -218520885 - Tigger5 DNA MER2_type -2244 79 26 * 321 348 50 7 chr2 34736390 34736531 -218520052 + L3 LINE CR1 1429 1575 -2 241 83 0 0 chr2 34736879 34736915 -218519668 - Alu SINE Alu -4 298 263 1091 100 13 7 chr2 34736916 34737066 -218519517 - AluSq/x SINE Alu -162 151 1 4323 109 225 3 chr2 34737592 34738268 -218518315 + LTR12 LTR ERV1 1 826 0 1899 120 0 4 chr2 34738268 34738534 -218518049 + AluSq SINE Alu 31 295 -18 2154 95 3 0 chr2 34739081 34739366 -218517217 + AluY SINE Alu 1 286 -25 1350 273 111 21 chr2 34739444 34740224 -218516359 - L1MC4a LINE L1 -1 6120 5280 282 312 58 0 chr2 34740646 34740800 -218515783 - L1MC4a LINE L1 -1302 4844 4682 311 258 69 38 chr2 34740913 34741072 -218515511 - L1ME LINE L1 -395 5709 5546 1201 231 45 132 chr2 34741108 34741752 -218514831 - MLT1E LTR MaLR -4 589 2 2288 70 37 13 chr2 34741914 34742213 -218514370 - AluY SINE Alu -3 308 3 251 224 121 0 chr2 34742865 34742923 -218513660 + MIR SINE MIR 82 146 -116 416 329 30 6 chr2 34743044 34743208 -218513375 - L3 LINE CR1 -159 1418 1251 330 384 82 25 chr2 34743844 34744281 -218512302 - L2 LINE L2 -5 3267 2806 725 307 110 49 chr2 34744678 34745186 -218511397 - MLT1K LTR MaLR -37 551 13 2396 76 3 7 chr2 34745812 34746114 -218510469 + AluY SINE Alu 1 301 -10 2022 154 7 0 chr2 34746379 34746685 -218509898 - AluSx SINE Alu -4 308 1 245 174 252 0 chr2 34746920 34747035 -218509548 - L1M LINE L1 -770 5408 5265 487 301 48 60 chr2 34747056 34747538 -218509045 - L1ME LINE L1 -937 5192 4717 1599 258 141 36 chr2 34747562 34747856 -218508727 - L1MC4 LINE L1 -116 7926 7664 2369 86 0 7 chr2 34747856 34748159 -218508424 - AluSc SINE Alu -8 301 1 1599 258 141 36 chr2 34748159 34748239 -218508344 - L1MC4 LINE L1 -378 7664 7594 2297 91 7 0 chr2 34748239 34748526 -218508057 - AluSc SINE Alu -20 289 1 1599 258 141 36 chr2 34748526 34748868 -218507715 - L1MC4 LINE L1 -448 7594 7134 526 301 156 43 chr2 34748941 34749737 -218506846 - L1ME LINE L1 -5232 887 2 1527 40 0 0 chr2 34749960 34750133 -218506450 + L1PA4 LINE L1 5979 6151 -4 197 132 26 0 chr2 34750335 34750373 -218506210 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 1864 115 80 3 chr2 34750960 34751247 -218505336 + AluSc SINE Alu 1 309 0 21 0 0 0 chr2 34751692 34751713 -218504870 + AT_rich Low_complexity Low_complexity 1 21 0 845 193 60 0 chr2 34753040 34753206 -218503377 - AluJo SINE Alu 0 312 137 207 314 0 0 chr2 34753215 34753266 -218503317 - MIR SINE MIR -119 143 93 216 276 66 79 chr2 34753972 34754124 -218502459 + L2 LINE L2 3164 3313 0 331 224 111 105 chr2 34754596 34754869 -218501714 - L1ME4a LINE L1 0 6121 5838 2245 91 0 3 chr2 34754869 34755179 -218501404 - AluSq SINE Alu 0 309 1 331 224 111 105 chr2 34755179 34755400 -218501183 - L1ME4a LINE L1 -283 5838 5620 1696 191 19 41 chr2 34755527 34755893 -218500690 - MSTD LTR MaLR 0 396 39 227 130 0 22 chr2 34755893 34755939 -218500644 + (TTCC)n Simple_repeat Simple_repeat 3 47 0 183 156 0 0 chr2 34755945 34755977 -218500606 + C-rich Low_complexity Low_complexity 2 33 0 1730 159 32 44 chr2 34755977 34756292 -218500291 - AluJo SINE Alu -1 311 1 263 122 102 0 chr2 34756292 34756341 -218500242 - MSTD LTR MaLR -373 55 2 1271 166 11 42 chr2 34756431 34756523 -218500060 + L1MA4 LINE L1 6021 6114 -186 2477 128 90 3 chr2 34756523 34756913 -218499670 - MSTA LTR MaLR -4 424 1 1271 166 11 42 chr2 34756913 34757104 -218499479 + L1MA4 LINE L1 6114 6295 -5 1929 230 132 54 chr2 34757453 34758069 -218498514 - L1MC4 LINE L1 -103 7705 7138 748 175 15 44 chr2 34758069 34758206 -218498377 - AluJo SINE Alu -169 133 1 1929 230 132 54 chr2 34758206 34758630 -218497953 - L1MC4 LINE L1 -670 7138 6748 234 62 0 0 chr2 34758630 34758662 -218497921 + (CA)n Simple_repeat Simple_repeat 2 33 0 1929 230 132 54 chr2 34758662 34758709 -218497874 - L1MC4 LINE L1 -1060 6748 6706 2608 33 3 0 chr2 34758709 34759012 -218497571 + AluY SINE Alu 8 311 0 1929 230 132 54 chr2 34759012 34759023 -218497560 - L1MC4 LINE L1 -1102 6706 6697 2307 103 0 0 chr2 34759023 34759325 -218497258 + AluSc SINE Alu 1 302 -7 1929 230 132 54 chr2 34759325 34759425 -218497158 - L1MC4 LINE L1 -1111 6697 6606 2346 76 0 52 chr2 34759425 34759753 -218496830 - AluY SINE Alu 0 311 1 1929 230 132 54 chr2 34759753 34759828 -218496755 - L1MC4 LINE L1 -1202 6606 6441 207 319 24 18 chr2 34760627 34760793 -218495790 - L2 LINE L2 -1210 2104 1938 490 303 44 26 chr2 34760834 34761051 -218495532 - MIR SINE MIR -14 248 20 276 323 71 0 chr2 34761122 34761221 -218495362 + L3 LINE CR1 1415 1520 -57 508 113 0 0 chr2 34761335 34761406 -218495177 - AluJ/FRAM SINE Alu -9 303 233 2165 101 0 66 chr2 34761595 34761913 -218494670 - AluSq SINE Alu -16 297 1 265 360 50 0 chr2 34762553 34762653 -218493930 + L2 LINE L2 3151 3255 -17 22 0 0 0 chr2 34762844 34762866 -218493717 + AT_rich Low_complexity Low_complexity 1 22 0 2153 88 7 20 chr2 34762927 34763224 -218493359 + AluSp SINE Alu 15 307 -6 945 216 63 151 chr2 34764232 34764800 -218491783 - LTR40a LTR ERVL -1 518 1 2273 240 48 7 chr2 34765164 34765701 -218490882 + MER69 DNA AcHobo 1 559 -1967 1184 255 94 19 chr2 34765707 34765817 -218490766 + MER69 DNA AcHobo 2010 2110 -416 2015 120 28 0 chr2 34765817 34766101 -218490482 + AluSg SINE Alu 1 292 -18 1184 255 94 19 chr2 34766101 34766469 -218490114 + MER69 DNA AcHobo 2110 2524 -2 2235 86 3 36 chr2 34766469 34766773 -218489810 - AluSx SINE Alu -10 302 9 785 310 85 44 chr2 34767420 34767709 -218488874 + HAL1b LINE L1 70 346 -1002 2507 55 3 10 chr2 34767709 34768021 -218488562 + AluY SINE Alu 1 310 -1 785 310 85 44 chr2 34768021 34768295 -218488288 + HAL1b LINE L1 346 656 -692 2621 149 54 46 chr2 34768304 34768606 -218487977 + MLT1D LTR MaLR 3 312 -193 2318 172 94 9 chr2 34768606 34769054 -218487529 - MER66B LTR ERV1 0 486 1 2621 149 54 46 chr2 34769054 34769248 -218487335 + MLT1D LTR MaLR 312 503 -2 418 201 30 79 chr2 34769255 34769419 -218487164 + HAL1b LINE L1 624 779 -569 1445 288 60 12 chr2 34769456 34769939 -218486644 - MLT1J LTR MaLR -5 506 1 783 220 126 106 chr2 34769939 34770169 -218486414 + HAL1b LINE L1 783 1007 -341 10662 58 22 7 chr2 34770169 34771523 -218485060 - SVA Other Other 0 1386 12 783 220 126 106 chr2 34771523 34771847 -218484736 + HAL1b LINE L1 1007 1348 0 27 0 0 0 chr2 34771905 34771932 -218484651 + AT_rich Low_complexity Low_complexity 1 27 0 1528 214 30 84 chr2 34772483 34772946 -218483637 - LTR16A LTR ERVL -7 443 6 530 309 29 62 chr2 34773732 34773975 -218482608 - MIR SINE MIR -15 247 13 275 368 9 18 chr2 34777962 34778076 -218478507 - L2 LINE L2 -181 3091 2979 242 202 27 9 chr2 34778231 34778354 -218478229 + GA-rich Low_complexity Low_complexity 1 125 0 304 239 48 14 chr2 34778355 34778482 -218478101 - L1ME LINE L1 -328 5842 5709 979 254 142 43 chr2 34779166 34779684 -218476899 - L2 LINE L2 -1 3312 2751 579 209 29 0 chr2 34779736 34779841 -218476742 + MLT1A1 LTR MaLR 3 110 -255 226 269 110 35 chr2 34780166 34780222 -218476361 - HAL1b LINE L1 0 1348 1298 2409 94 0 0 chr2 34780222 34780529 -218476054 + AluY SINE Alu 1 307 -4 226 269 110 35 chr2 34780529 34780617 -218475966 - HAL1b LINE L1 -50 1298 1193 238 186 0 51 chr2 34780662 34780721 -218475862 + L2 LINE L2 3258 3313 0 411 220 88 64 chr2 34780783 34781033 -218475550 - HAL1b LINE L1 -205 1143 888 812 232 157 14 chr2 34781055 34781425 -218475158 - HAL1b LINE L1 -526 822 400 214 159 0 72 chr2 34781428 34781497 -218475086 + T-rich Low_complexity Low_complexity 2 65 0 314 153 0 14 chr2 34781726 34781826 -218474757 - MER53 DNA DNA -30 159 2 712 251 14 106 chr2 34782715 34783040 -218473543 - L1ME3 LINE L1 0 6164 5875 1993 143 3 3 chr2 34783040 34783341 -218473242 - AluSx SINE Alu -11 301 1 712 251 14 106 chr2 34783341 34783382 -218473201 - L1ME3 LINE L1 -289 5875 5832 247 246 45 82 chr2 34783586 34783720 -218472863 - L1 LINE L1 -3230 2916 2788 419 266 60 86 chr2 34783917 34784350 -218472233 - HAL1b LINE L1 -858 490 69 2167 206 40 33 chr2 34784482 34785089 -218471494 + pTR5 LTR ERV1 741 1351 -1087 3898 90 147 149 chr2 34785099 34785923 -218470660 + LTR12 LTR ERV1 5 826 0 2225 110 0 3 chr2 34788423 34788724 -218467859 - AluSx SINE Alu -12 300 1 206 216 0 0 chr2 34788985 34789022 -218467561 + polypyrimidine Low_complexity Low_complexity 4 40 0 209 254 30 90 chr2 34789101 34789168 -218467415 + L2 LINE L2 3156 3218 -54 2126 185 13 8 chr2 34789219 34789613 -218466970 + MER57A LTR ERV1 7 402 -1 199 328 35 0 chr2 34790345 34790403 -218466180 + L2 LINE L2 3213 3272 0 1951 79 0 0 chr2 34790466 34790706 -218465877 - AluSc SINE Alu -14 295 56 432 0 0 0 chr2 34790877 34790925 -218465658 + (TG)n Simple_repeat Simple_repeat 2 49 0 24 32 0 0 chr2 34791186 34791217 -218465366 + AT_rich Low_complexity Low_complexity 1 31 0 182 256 195 12 chr2 34791316 34791398 -218465185 + L3 LINE CR1 1475 1571 -6 1577 197 97 0 chr2 34791748 34792090 -218464493 - MSTB1 LTR MaLR 0 432 68 540 233 41 0 chr2 34793262 34793408 -218463175 + MER103 DNA DNA 11 162 -4 1594 219 71 40 chr2 34793525 34793978 -218462605 + MLT1C LTR MaLR 1 467 0 621 335 133 27 chr2 34794249 34795008 -218461575 + L2 LINE L2 2468 3313 0 218 215 0 31 chr2 34795008 34795073 -218461510 + (TGAA)n Simple_repeat Simple_repeat 2 64 0 918 265 114 33 chr2 34795156 34795347 -218461236 - LTR67 LTR ERVL -1 556 382 515 72 0 175 chr2 34795347 34795444 -218461139 - MADE1 DNA Mariner 0 80 1 918 265 114 33 chr2 34795444 34795611 -218460972 - LTR67 LTR ERVL -175 382 169 863 260 145 32 chr2 34796281 34796716 -218459867 - ERVL LTR ERVL -695 5069 4586 604 200 0 0 chr2 34796717 34796812 -218459771 + FRAM SINE Alu 54 148 -28 1616 286 79 57 chr2 34796831 34796924 -218459659 - ERVL LTR ERVL -1184 4580 4490 2534 50 3 3 chr2 34796924 34797224 -218459359 - AluY SINE Alu -11 300 1 1616 286 79 57 chr2 34797224 34797782 -218458801 - ERVL LTR ERVL -1274 4490 3946 1582 194 0 58 chr2 34797782 34798107 -218458476 - AluJo SINE Alu -4 308 3 1616 286 79 57 chr2 34798107 34798768 -218457815 - ERVL LTR ERVL -1818 3946 3179 211 273 18 0 chr2 34798847 34798902 -218457681 + CT-rich Low_complexity Low_complexity 4 59 0 182 362 0 57 chr2 34800300 34800405 -218456178 - L3 LINE CR1 -1471 106 8 2225 100 0 3 chr2 34800591 34800881 -218455702 + AluSc SINE Alu 1 289 -20 1951 133 15 0 chr2 34801225 34801496 -218455087 + AluSx SINE Alu 1 275 -37 207 0 0 0 chr2 34801506 34801529 -218455054 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2380 93 0 0 chr2 34801533 34801835 -218454748 + AluY SINE Alu 3 304 -7 1405 149 122 6 chr2 34802317 34802721 -218453862 - Charlie5 DNA MER1_type -467 2145 1669 2864 194 58 39 chr2 34802725 34803313 -218453270 + MER77 LTR ERV1 1 599 -6 1140 262 23 52 chr2 34803331 34803674 -218452909 + MER77-int LTR ERV1 14 346 -3845 1613 282 149 14 chr2 34803811 34804537 -218452046 + L2 LINE L2 938 1761 -1553 1157 261 87 29 chr2 34804539 34804635 -218451948 + L2 LINE L2 2579 2668 -645 2878 104 3 5 chr2 34804635 34805011 -218451572 + THE1C LTR MaLR 1 375 0 1157 261 87 29 chr2 34805011 34805540 -218451043 + L2 LINE L2 2668 3224 -89 2074 133 0 3 chr2 34805545 34805845 -218450738 - AluSc SINE Alu -3 306 8 1081 298 94 34 chr2 34805867 34807118 -218449465 - L1M4 LINE L1 -1703 4443 3117 2324 103 0 7 chr2 34807129 34807439 -218449144 - AluSx SINE Alu -2 310 3 25 31 0 0 chr2 34807565 34807597 -218448986 + AT_rich Low_complexity Low_complexity 1 32 0 1852 169 147 78 chr2 34807621 34807840 -218448743 - Charlie5 DNA MER1_type 0 2624 2422 2102 117 0 19 chr2 34807840 34808147 -218448436 - AluSg1 SINE Alu -8 301 1 1852 169 147 78 chr2 34808147 34808185 -218448398 - Charlie5 DNA MER1_type -202 2422 2388 1812 82 13 9 chr2 34808185 34808417 -218448166 - AluSq SINE Alu -80 233 1 1852 169 147 78 chr2 34808417 34808573 -218448010 - Charlie5 DNA MER1_type -236 2388 2244 1006 199 0 6 chr2 34808573 34808739 -218447844 + FRAM SINE Alu 1 165 -1 1852 169 147 78 chr2 34808739 34809005 -218447578 - Charlie5 DNA MER1_type -380 2244 1896 1914 127 0 20 chr2 34809135 34809435 -218447148 - AluY SINE Alu -16 295 2 1913 148 3 10 chr2 34810977 34811288 -218445295 + AluSx SINE Alu 1 309 -3 226 375 48 0 chr2 34811565 34811669 -218444914 - L2 LINE L2 -13 3259 3151 2229 112 0 0 chr2 34811760 34812055 -218444528 + AluSg SINE Alu 14 308 -2 195 274 110 0 chr2 34812169 34812242 -218444341 + MIR SINE MIR 138 218 -44 21 0 0 0 chr2 34812801 34812822 -218443761 + AT_rich Low_complexity Low_complexity 1 21 0 258 231 0 0 chr2 34813075 34813127 -218443456 + LTR30 LTR ERV1 1 52 -670 1850 137 39 152 chr2 34813127 34813609 -218442974 + LTR12 LTR ERV1 53 480 -234 207 321 83 0 chr2 34813613 34813722 -218442861 + MIR SINE MIR 144 261 -1 2498 66 0 3 chr2 34814888 34815192 -218441391 + AluY SINE Alu 1 303 -8 872 90 0 0 chr2 34815293 34815404 -218441179 + AluSg/x SINE Alu 195 305 -4 225 0 0 0 chr2 34815638 34815663 -218440920 + (T)n Simple_repeat Simple_repeat 1 25 0 216 0 0 0 chr2 34815894 34815918 -218440665 + (A)n Simple_repeat Simple_repeat 1 24 0 1317 159 34 29 chr2 34816155 34816394 -218440189 - AluJo SINE Alu -6 306 67 4191 87 14 35 chr2 34817445 34817620 -218438963 + MER41A LTR ERV1 1 178 -376 2293 85 14 3 chr2 34817620 34817913 -218438670 + AluSq SINE Alu 1 296 -17 4191 87 14 35 chr2 34817913 34818134 -218438449 + MER41A LTR ERV1 178 384 -170 2567 59 0 0 chr2 34818134 34818438 -218438145 + AluYa5 SINE Alu 1 304 -7 4191 87 14 35 chr2 34818438 34818606 -218437977 + MER41A LTR ERV1 384 554 0 1747 201 124 22 chr2 34818647 34819099 -218437484 + MLT1D LTR MaLR 8 505 0 1599 150 41 17 chr2 34819432 34819726 -218436857 + AluJo SINE Alu 1 301 -11 1553 141 54 71 chr2 34819977 34820183 -218436400 + L1MA8 LINE L1 5929 6137 -154 2385 84 0 3 chr2 34820183 34820479 -218436104 - AluY SINE Alu -16 295 1 1553 141 54 71 chr2 34820479 34820537 -218436046 + L1MA8 LINE L1 6137 6194 -97 2146 207 52 7 chr2 34820537 34820977 -218435606 - LOR1b LTR ERV1 0 461 2 1553 141 54 71 chr2 34820977 34821079 -218435504 + L1MA8 LINE L1 6194 6290 -1 1525 192 39 51 chr2 34821102 34821514 -218435069 + MLT1C LTR MaLR 53 459 -8 2188 132 0 0 chr2 34821551 34821861 -218434722 - AluSx SINE Alu -2 310 1 571 230 121 24 chr2 34821974 34822222 -218434361 - L1MEc LINE L1 -4032 2364 2093 607 211 7 7 chr2 34822222 34822374 -218434209 + (TA)n Simple_repeat Simple_repeat 1 152 0 479 280 21 69 chr2 34822391 34822580 -218434003 - AluYb8 SINE Alu -60 258 79 3324 248 70 89 chr2 34822894 34824328 -218432255 + MER61D-int LTR ERV1 3367 4772 -1986 275 277 12 12 chr2 34824635 34824718 -218431865 + HERVL18 LTR ERVL 2229 2311 -3736 22 0 0 0 chr2 34824785 34824807 -218431776 + AT_rich Low_complexity Low_complexity 1 22 0 456 346 56 49 chr2 34824878 34825536 -218431047 + HERVL18 LTR ERVL 2820 3482 -2172 * 3821 245 20 57 chr2 34825344 34826429 -218430154 + MER61D-int LTR ERV1 2014 3058 -1133 3014 179 10 2 chr2 34826432 34826925 -218429658 - LOR1a LTR ERV1 0 497 1 1654 164 183 16 chr2 34826941 34827308 -218429275 - MSTA LTR MaLR 0 428 1 9546 160 32 16 chr2 34827309 34828919 -218427664 - MSTA-int LTR MaLR -1 1650 15 2278 152 86 10 chr2 34828943 34829338 -218427245 - MSTA LTR MaLR 0 428 4 1685 219 70 111 chr2 34829381 34830067 -218426516 + MER61D-int LTR ERV1 3079 3736 -455 1339 200 165 17 chr2 34830070 34830415 -218426168 + MSTD LTR MaLR 1 396 0 1745 117 82 82 chr2 34830487 34830719 -218425864 - LTR26B LTR ERV1 0 531 300 2171 99 23 78 chr2 34830719 34831104 -218425479 + THE1B LTR MaLR 1 364 0 1745 117 82 82 chr2 34831104 34831157 -218425426 - LTR26B LTR ERV1 -231 300 248 2313 66 40 13 chr2 34831157 34831459 -218425124 - AluY SINE Alu -1 310 1 1745 117 82 82 chr2 34831459 34831515 -218425068 - LTR26B LTR ERV1 -282 249 189 1375 123 155 20 chr2 34831946 34832198 -218424385 - LTR26E LTR ERV1 -336 286 1 2373 100 3 0 chr2 34832257 34832558 -218424025 + AluY SINE Alu 1 302 -9 1329 213 7 31 chr2 34832566 34832857 -218423726 + MER61D-int LTR ERV1 3853 4136 -55 1994 164 119 11 chr2 34833733 34834112 -218422471 - MSTA LTR MaLR 0 428 9 693 94 55 31 chr2 34834120 34834247 -218422336 - MSTA-int LTR MaLR -30 1550 1421 207 0 0 0 chr2 34835531 34835554 -218421029 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 727 190 7 15 chr2 34835628 34835761 -218420822 - MLT1C LTR MaLR 0 467 336 1531 178 67 12 chr2 34835761 34836181 -218420402 + MER61D LTR ERV1 4 501 0 1146 227 81 25 chr2 34836181 34836424 -218420159 - MLT1C LTR MaLR -126 341 74 2309 102 3 3 chr2 34836424 34836727 -218419856 - AluSc SINE Alu -6 303 1 1146 227 81 25 chr2 34836727 34836804 -218419779 - MLT1C LTR MaLR -393 74 3 3607 118 10 0 chr2 34836868 34837360 -218419223 - LOR1a LTR ERV1 0 497 1 5251 109 46 64 chr2 34837736 34838577 -218418006 - LTR12 LTR ERV1 0 826 1 424 207 49 177 chr2 34839954 34840132 -218416451 - L2 LINE L2 0 3313 3188 2158 115 7 0 chr2 34840132 34840437 -218416146 + AluSx SINE Alu 6 312 0 424 207 49 177 chr2 34840437 34840563 -218416020 - L2 LINE L2 -125 3188 3048 258 313 0 0 chr2 34840571 34840638 -218415945 + MER69 DNA AcHobo 1 67 -1159 431 178 76 34 chr2 34840794 34840912 -218415671 + MER69 DNA AcHobo 2380 2502 -24 502 252 180 18 chr2 34841211 34841433 -218415150 - MIR SINE MIR -2 260 3 2118 99 14 3 chr2 34841627 34841910 -218414673 - AluSg SINE Alu -24 286 1 391 286 117 49 chr2 34841967 34842172 -218414411 - MIR SINE MIR -41 221 1 2198 124 3 0 chr2 34842603 34842902 -218413681 - AluSx SINE Alu -12 300 1 454 183 51 44 chr2 34842911 34843048 -218413535 - L1MC5 LINE L1 -52 7909 7772 3276 209 55 17 chr2 34843054 34843775 -218412808 - L1MB8 LINE L1 -8 6170 5389 3285 140 29 4 chr2 34843775 34844260 -218412323 - LOR1a LTR ERV1 0 497 1 3276 209 55 17 chr2 34844260 34844704 -218411879 - L1MB8 LINE L1 -789 5389 4963 1070 189 18 53 chr2 34844715 34844942 -218411641 + MER20 DNA MER1_type 1 219 0 1975 154 10 0 chr2 34844984 34845290 -218411293 + AluSg SINE Alu 1 309 -1 455 242 19 31 chr2 34845395 34845556 -218411027 - L1M4 LINE L1 -6335 207 49 239 377 117 0 chr2 34845650 34845804 -218410779 - L2 LINE L2 0 3272 3101 * 744 264 84 13 chr2 34845780 34846007 -218410576 + MIR SINE MIR 8 250 -12 4233 141 112 35 chr2 34846064 34846831 -218409752 + LTR1B LTR ERV1 1 826 0 1723 158 8 0 chr2 34847234 34847500 -218409083 + AluJo SINE Alu 24 291 -21 792 166 72 0 chr2 34847631 34847770 -218408813 - MLT1A1 LTR MaLR -47 318 170 3767 142 75 41 chr2 34847896 34848627 -218407956 - L1MB8 LINE L1 -9 6169 5414 625 127 75 202 chr2 34848614 34848881 -218407702 + L1MB8 LINE L1 5906 6138 -40 * 2132 252 62 41 chr2 34848876 34849778 -218406805 - L1MB8 LINE L1 -1293 4853 3933 3033 185 42 10 chr2 34849962 34850695 -218405888 - L1MB8 LINE L1 -743 5435 4679 2165 64 3 11 chr2 34850866 34851176 -218405407 + AluY SINE Alu 1 308 0 810 92 0 21 chr2 34853342 34853484 -218403099 + (GA)n Simple_repeat Simple_repeat 2 140 0 1093 175 85 88 chr2 34853492 34853846 -218402737 - MLT2B1 LTR ERVL -55 359 7 2047 160 33 3 chr2 34853900 34854232 -218402351 - MER2 DNA MER2_type 0 344 3 2412 84 0 0 chr2 34854683 34854980 -218401603 + AluY SINE Alu 2 298 -13 2168 106 0 0 chr2 34854997 34855301 -218401282 + AluSq SINE Alu 2 305 0 3159 208 50 2 chr2 34855788 34856412 -218400171 - MLT1E1 LTR MaLR 0 654 1 1792 158 123 22 chr2 34857355 34857578 -218399005 - MER57A LTR ERV1 0 403 204 2115 178 66 82 chr2 34857578 34858140 -218398443 + MLT2B3 LTR ERVL 2 554 0 1792 158 123 22 chr2 34858140 34858282 -218398301 - MER57A LTR ERV1 -199 204 1 180 314 220 25 chr2 34858373 34858491 -218398092 - L3 LINE CR1 -45 1532 1392 1401 188 28 10 chr2 34858678 34859107 -218397476 + LTR32 LTR ERVL 8 470 -1 1372 146 82 167 chr2 34859200 34859666 -218396917 + MSTA LTR MaLR 1 426 -2 2315 77 0 27 chr2 34859809 34860107 -218396476 - AluY SINE Alu -21 290 1 712 225 234 11 chr2 34860111 34860466 -218396117 - L1MCb LINE L1 -4181 2383 1950 922 197 10 10 chr2 34860469 34860677 -218395906 - L1P LINE L1 -861 5285 5078 1824 175 44 6 chr2 34860680 34861022 -218395561 + L1PB4 LINE L1 5798 6152 -4 1701 153 10 17 chr2 34861118 34861406 -218395177 + AluJb SINE Alu 1 286 -26 2743 237 28 43 chr2 34861423 34861687 -218394896 - L1MCb LINE L1 -4781 1783 1516 2449 69 0 7 chr2 34861687 34861991 -218394592 - AluY SINE Alu -9 302 1 2743 237 28 43 chr2 34861991 34862450 -218394133 - L1MCb LINE L1 -5048 1516 1051 2040 122 0 43 chr2 34862450 34862754 -218393829 - AluSg SINE Alu -19 291 1 2743 237 28 43 chr2 34862754 34863250 -218393333 - L1MCb LINE L1 -5513 1051 570 974 108 102 0 chr2 34863766 34863932 -218392651 - pTR5 LTR ERV1 -2046 392 210 528 134 18 18 chr2 34863926 34864028 -218392555 - pTR5 LTR ERV1 -1219 1219 1118 4735 102 4 8 chr2 34864028 34864970 -218391613 - HERV17 LTR ERV1 0 8399 504 353 161 0 0 chr2 34864966 34865028 -218391555 - HERV17 LTR ERV1 -835 7564 7503 * 706 123 15 51 chr2 34865026 34865221 -218391362 - HERV17 LTR ERV1 -7726 900 713 375 305 37 53 chr2 34865456 34865646 -218390937 + MIR SINE MIR 76 262 0 240 65 43 94 chr2 34865709 34865847 -218390736 + (TATAA)n Simple_repeat Simple_repeat 5 135 0 231 36 0 0 chr2 34865893 34865921 -218390662 + (CA)n Simple_repeat Simple_repeat 2 29 0 2017 120 7 10 chr2 34865923 34866215 -218390368 - AluSq SINE Alu -22 291 1 240 303 0 40 chr2 34866345 34866444 -218390139 + (TA)n Simple_repeat Simple_repeat 1 95 0 206 135 11 56 chr2 34866546 34866635 -218389948 + T-rich Low_complexity Low_complexity 2 86 0 2311 97 0 3 chr2 34866658 34866966 -218389617 - AluY SINE Alu -3 308 2 198 0 0 0 chr2 34866966 34866988 -218389595 + (TTTA)n Simple_repeat Simple_repeat 4 25 0 2177 100 0 4 chr2 34866989 34867270 -218389313 - AluY SINE Alu -31 280 1 1498 137 69 4 chr2 34867697 34867974 -218388609 + L1MA8 LINE L1 5997 6291 0 257 337 11 0 chr2 34868802 34868897 -218387686 - MIR3 SINE MIR -23 185 90 631 201 54 49 chr2 34869312 34869496 -218387087 - MLT1B LTR MaLR -203 187 3 550 334 127 14 chr2 34869894 34870465 -218386118 - L2 LINE L2 0 3313 2682 210 143 0 0 chr2 34870754 34870789 -218385794 + (TTCC)n Simple_repeat Simple_repeat 3 37 0 1549 103 0 5 chr2 34870947 34871170 -218385413 + AluSg/x SINE Alu 79 300 0 36 40 0 0 chr2 34871468 34871518 -218385065 + AT_rich Low_complexity Low_complexity 1 50 0 1454 202 58 17 chr2 34872071 34872433 -218384150 - Charlie4a DNA MER1_type -124 384 8 196 294 86 68 chr2 34873230 34873393 -218383190 + L3 LINE CR1 1411 1576 -1 3758 95 12 18 chr2 34874275 34874789 -218381794 - MER9 LTR ERVK 0 511 1 7750 114 3 3 chr2 34874789 34876221 -218380362 - HERVK9 LTR ERVK 0 7969 4582 1941 52 0 0 chr2 34876220 34876451 -218380132 - HERVK9 LTR ERVK -1975 3941 3711 * 22272 74 1 6 chr2 34876451 34879251 -218377332 - HERVK9 LTR ERVK -3130 2786 1 4011 104 0 4 chr2 34879251 34879762 -218376821 - MER9 LTR ERVK 0 511 3 2302 89 0 3 chr2 34880351 34880655 -218375928 - AluY SINE Alu -8 303 1 21 0 0 0 chr2 34880730 34880751 -218375832 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr2 34881145 34881182 -218375401 + AT_rich Low_complexity Low_complexity 1 37 0 24 53 0 0 chr2 34881438 34881476 -218375107 + AT_rich Low_complexity Low_complexity 1 38 0 252 86 0 0 chr2 34881794 34881829 -218374754 + (CA)n Simple_repeat Simple_repeat 1 35 0 22 0 0 0 chr2 34882454 34882476 -218374107 + AT_rich Low_complexity Low_complexity 1 22 0 1930 186 6 55 chr2 34882709 34883181 -218373402 - L1MB8 LINE L1 -12 6166 5718 822 222 8 62 chr2 34883189 34883328 -218373255 - L1MB8 LINE L1 -885 5261 5141 1853 122 20 54 chr2 34883328 34883494 -218373089 - AluSc SINE Alu -24 285 132 2428 60 10 0 chr2 34883494 34883792 -218372791 - AluY SINE Alu -10 301 1 1853 122 20 54 chr2 34883792 34883920 -218372663 - AluSc SINE Alu -177 132 1 822 222 8 62 chr2 34883920 34884037 -218372546 - L1MB8 LINE L1 -1005 5141 5019 216 331 39 58 chr2 34885329 34885483 -218371100 + MIR SINE MIR 64 214 -48 2282 78 0 0 chr2 34886540 34886851 -218369732 - AluY SINE Alu 0 311 1 404 315 150 23 chr2 34886992 34887338 -218369245 + MLT1C LTR MaLR 10 399 -68 1849 5 5 0 chr2 34887350 34887552 -218369031 - AluYa5 SINE Alu -3 308 106 2010 126 0 0 chr2 34887655 34887932 -218368651 - AluSx SINE Alu -35 277 1 510 221 123 21 chr2 34888045 34888280 -218368303 - L1MEc LINE L1 -4032 2364 2106 209 200 0 0 chr2 34888285 34888320 -218368263 + (TATATG)n Simple_repeat Simple_repeat 4 38 0 327 311 0 0 chr2 34888320 34888410 -218368173 + L1MC4 LINE L1 6614 6703 -1339 2377 78 0 29 chr2 34888417 34888724 -218367859 - AluY SINE Alu -13 298 1 311 322 88 9 chr2 34888747 34888974 -218367609 - L1MEc LINE L1 -4320 2076 1832 300 53 0 0 chr2 34889826 34889864 -218366719 + (TG)n Simple_repeat Simple_repeat 1 38 0 2231 98 0 0 chr2 34889950 34890236 -218366347 - AluY SINE Alu -17 294 9 343 268 94 0 chr2 34890392 34890530 -218366053 - MER103 DNA DNA -3 163 13 204 290 0 16 chr2 34890569 34890631 -218365952 + GA-rich Low_complexity Low_complexity 2 62 0 337 270 45 0 chr2 34892236 34892325 -218364258 + MIR3 SINE MIR 106 198 -10 832 229 92 4 chr2 34893228 34893455 -218363128 + MER58 DNA MER1_type 1 247 -2173 1785 145 0 25 chr2 34894199 34894481 -218362102 - AluJb SINE Alu -18 294 20 226 108 27 0 chr2 34894507 34894544 -218362039 - MSTB1 LTR MaLR 0 432 395 2055 125 0 3 chr2 34894545 34894832 -218361751 + AluSx SINE Alu 1 286 -26 319 322 0 0 chr2 34894843 34894933 -218361650 - L1MC4 LINE L1 -1339 6703 6614 * 325 304 0 0 chr2 34894856 34894948 -218361635 + L1MC4 LINE L1 6615 6706 -1336 1941 203 25 10 chr2 34894949 34895343 -218361240 - MSTB1 LTR MaLR -32 400 1 199 339 0 0 chr2 34896155 34896211 -218360372 + MIR SINE MIR 13 68 -194 308 262 73 61 chr2 34896397 34896561 -218360022 + MLT1J1 LTR MaLR 269 434 -12 339 366 68 26 chr2 34897085 34897276 -218359307 - MIR3 SINE MIR -4 204 6 210 250 0 0 chr2 34897448 34897488 -218359095 + MIR SINE MIR 217 256 -6 411 283 29 12 chr2 34897955 34898128 -218358455 + L1MEc LINE L1 1541 1716 -4680 815 251 52 55 chr2 34898211 34898538 -218358045 + MER58B DNA MER1_type 1 326 -15 2638 92 5 24 chr2 34898751 34899133 -218357450 - THE1C LTR MaLR 0 375 1 721 238 6 6 chr2 34899163 34899331 -218357252 - MLT1A2 LTR MaLR -1 373 206 848 232 89 6 chr2 34899461 34899797 -218356786 + L1MEc LINE L1 2680 3043 -3172 5715 143 28 8 chr2 34899801 34901238 -218355345 + L1MA5A LINE L1 4823 6287 -10 32 43 0 0 chr2 34901238 34901284 -218355299 + AT_rich Low_complexity Low_complexity 1 46 0 557 188 19 111 chr2 34901284 34901409 -218355174 + L1MEc LINE L1 3032 3122 -3093 1251 56 0 0 chr2 34901409 34901570 -218355013 + L1PA4 LINE L1 5992 6152 -3 557 188 19 111 chr2 34901570 34901705 -218354878 + L1MEc LINE L1 3122 3268 -2947 345 190 24 0 chr2 34901765 34901861 -218354722 + L1MEc LINE L1 2133 2270 -3918 840 48 0 0 chr2 34901862 34901967 -218354616 + (GGAA)n Simple_repeat Simple_repeat 2 106 0 216 67 0 0 chr2 34902171 34902201 -218354382 + (GGGGA)n Simple_repeat Simple_repeat 2 31 0 1069 233 117 4 chr2 34902232 34902692 -218353891 + L1MEc LINE L1 2231 2742 -3404 25 51 0 0 chr2 34902692 34902731 -218353852 + AT_rich Low_complexity Low_complexity 1 39 0 2259 72 4 0 chr2 34905123 34905438 -218351145 - AluY SINE Alu 0 316 1 247 235 15 0 chr2 34905464 34905532 -218351051 + L1PA16 LINE L1 6077 6145 -21 1425 259 4 28 chr2 34905677 34906140 -218350443 - L1ME3 LINE L1 -250 5912 5461 1266 253 106 13 chr2 34906151 34906674 -218349909 + L2 LINE L2 2128 2792 -522 864 166 0 14 chr2 34906678 34906823 -218349760 + FRAM SINE Alu 4 146 -30 579 276 136 59 chr2 34906843 34907219 -218349364 + L2 LINE L2 2771 3159 -154 1662 97 5 0 chr2 34907220 34907437 -218349146 + AluY SINE Alu 1 218 -93 253 62 42 0 chr2 34907442 34907490 -218349093 + (TA)n Simple_repeat Simple_repeat 2 51 0 325 319 109 29 chr2 34907539 34907677 -218348906 - MIR SINE MIR -111 151 3 2029 92 68 81 chr2 34908190 34908559 -218348024 - THE1B LTR MaLR 0 364 1 2167 110 0 3 chr2 34908809 34909100 -218347483 - AluSc SINE Alu -19 290 1 189 0 0 0 chr2 34909714 34909735 -218346848 + (TTA)n Simple_repeat Simple_repeat 2 22 0 2065 73 0 8 chr2 34909742 34910002 -218346581 - AluSc SINE Alu -17 292 35 1443 201 3 7 chr2 34910063 34910361 -218346222 - L1MB3 LINE L1 -5 6178 5882 474 153 183 8 chr2 34910374 34910505 -218346078 + L1MB3 LINE L1 5713 5866 -308 31 0 0 0 chr2 34910665 34910696 -218345887 + AT_rich Low_complexity Low_complexity 1 31 0 851 147 0 16 chr2 34910783 34910912 -218345671 + FLAM_C SINE Alu 1 127 -16 678 331 145 13 chr2 34911011 34911404 -218345179 + L2 LINE L2 774 1218 -2096 2778 120 38 12 chr2 34911404 34911915 -218344668 + L1MA2 LINE L1 5711 6228 -76 22 0 0 0 chr2 34911915 34911937 -218344646 + AT_rich Low_complexity Low_complexity 1 22 0 1616 291 213 24 chr2 34911937 34913170 -218343413 + L2 LINE L2 1239 2703 -611 2037 265 60 27 chr2 34913184 34914100 -218342483 - HAL1 LINE L1 -592 1915 970 287 246 0 14 chr2 34914154 34914223 -218342360 - HAL1 LINE L1 -1670 837 770 2410 72 0 0 chr2 34914227 34914518 -218342065 + AluY SINE Alu 6 296 -15 1359 117 50 157 chr2 34914622 34914965 -218341618 - AluYb8 SINE Alu -2 306 1 435 19 0 0 chr2 34915076 34915128 -218341455 + (CA)n Simple_repeat Simple_repeat 2 53 0 246 100 0 0 chr2 34915416 34915432 -218341151 + (GA)n Simple_repeat Simple_repeat 1 16 -24 243 0 0 0 chr2 34915432 34915459 -218341124 + (TG)n Simple_repeat Simple_repeat 1 27 0 246 100 0 0 chr2 34915459 34915482 -218341101 + (GA)n Simple_repeat Simple_repeat 15 40 0 756 280 94 5 chr2 34915505 34915834 -218340749 - LTR16A1 LTR ERVL -2 455 114 327 109 4 0 chr2 34916260 34916320 -218340263 - Alu SINE Alu -253 46 1 211 132 0 26 chr2 34916373 34916411 -218340172 + (GAA)n Simple_repeat Simple_repeat 1 37 0 284 194 97 0 chr2 34917435 34917497 -218339086 - MLT2D LTR ERVL -131 283 216 2287 77 10 0 chr2 34918019 34918319 -218338264 + AluY SINE Alu 1 303 -8 2201 105 0 41 chr2 34919236 34919550 -218337033 - AluSq SINE Alu -12 301 1 288 0 0 0 chr2 34920904 34920936 -218335647 + (TA)n Simple_repeat Simple_repeat 2 33 0 2183 115 0 16 chr2 34920946 34921260 -218335323 - AluSc SINE Alu 0 309 1 1060 109 32 4 chr2 34921391 34921589 -218334994 - L1MA1 LINE L1 -170 6132 5925 1719 126 21 149 chr2 34921660 34922090 -218334493 + THE1C LTR MaLR 1 375 0 477 129 11 21 chr2 34922090 34922183 -218334400 + THE1C-int LTR MaLR 1 92 -1488 373 206 147 80 chr2 34923377 34923765 -218332818 - L1MC5 LINE L1 -38 7923 7510 21 0 0 0 chr2 34923818 34923839 -218332744 + AT_rich Low_complexity Low_complexity 1 21 0 1897 111 75 0 chr2 34923842 34924122 -218332461 + AluSx SINE Alu 1 301 -11 258 130 167 0 chr2 34924128 34924182 -218332401 - L1MA8 LINE L1 -21 6270 6208 267 178 0 68 chr2 34924184 34924257 -218332326 - L1MA8 LINE L1 -42 6249 6182 2279 110 3 0 chr2 34924312 34924621 -218331962 - AluY SINE Alu -1 310 1 558 201 36 0 chr2 34924678 34924817 -218331766 - L1MC5 LINE L1 -544 7417 7274 820 238 48 113 chr2 34924817 34925217 -218331366 - MLT1A2 LTR MaLR 0 374 1 501 198 15 86 chr2 34925328 34925525 -218331058 - L1MC5 LINE L1 -851 7110 6928 239 290 104 18 chr2 34925611 34925832 -218330751 - L1M4 LINE L1 -1805 4341 4102 1315 137 73 0 chr2 34925841 34926059 -218330524 - MER47A DNA MER2_type -4 362 129 975 167 33 0 chr2 34926059 34926239 -218330344 - Tigger1 DNA MER2_type 0 2418 2233 655 197 21 7 chr2 34926244 34926386 -218330197 - Tigger1 DNA MER2_type -2273 145 2 734 196 0 0 chr2 34926396 34926529 -218330054 - MER47A DNA MER2_type -233 133 1 346 292 58 25 chr2 34926625 34926902 -218329681 - L1M4 LINE L1 -2174 3972 3687 518 309 61 77 chr2 34926959 34927416 -218329167 - L1M4 LINE L1 -3008 3138 2689 1582 168 82 48 chr2 34927816 34928168 -218328415 + MLT1A1 LTR MaLR 2 365 0 858 277 111 21 chr2 34928509 34928888 -218327695 - MER77 LTR ERV1 -8 597 185 509 294 60 10 chr2 34929503 34929887 -218326696 - L1M4 LINE L1 -3092 3054 2652 664 338 85 25 chr2 34930654 34931127 -218325456 - L2 LINE L2 -1 3312 2812 29 47 0 0 chr2 34931242 34931285 -218325298 + AT_rich Low_complexity Low_complexity 1 43 0 892 255 119 54 chr2 34931508 34931791 -218324792 + MLT2D LTR ERVL 53 413 -107 2246 113 6 0 chr2 34931791 34932102 -218324481 - AluSp SINE Alu 0 313 1 892 255 119 54 chr2 34932102 34932174 -218324409 + MLT2D LTR ERVL 413 479 -41 195 218 0 0 chr2 34932175 34932276 -218324307 + (TA)n Simple_repeat Simple_repeat 1 101 0 422 230 11 48 chr2 34932289 34932476 -218324107 + (TA)n Simple_repeat Simple_repeat 1 180 0 2095 138 0 0 chr2 34932824 34933122 -218323461 - AluSc SINE Alu -11 298 1 6711 115 25 17 chr2 34933150 34934213 -218322370 + MER11C LTR ERVK 1 1071 0 213 214 146 79 chr2 34934282 34934371 -218322212 - MER5B DNA MER1_type 0 178 84 766 279 82 55 chr2 34934654 34935070 -218321513 + MLT1J1 LTR MaLR 17 443 -3 336 380 68 22 chr2 34935175 34935675 -218320908 - L2 LINE L2 -1018 2296 1774 394 256 44 7 chr2 34936743 34936880 -218319703 + MER69 DNA AcHobo 1 142 -1084 180 0 0 0 chr2 34937574 34937594 -218318989 + (TA)n Simple_repeat Simple_repeat 2 21 0 2297 104 0 3 chr2 34937594 34937892 -218318691 - AluSc SINE Alu -12 297 1 180 111 0 0 chr2 34938075 34938102 -218318481 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 1457 325 82 46 chr2 34938332 34939208 -218317375 - L2 LINE L2 -213 3059 2122 2330 83 0 7 chr2 34939208 34939508 -218317075 + AluY SINE Alu 1 298 -13 1457 325 82 46 chr2 34939508 34939906 -218316677 - L2 LINE L2 -1150 2122 1739 238 175 70 0 chr2 34940580 34940637 -218315946 + MIR SINE MIR 137 197 -65 2025 190 81 0 chr2 34943490 34943884 -218312699 - MSTB LTR MaLR 0 426 1 8529 172 48 5 chr2 34943886 34945467 -218311116 - MSTB-int LTR MaLR -2 1649 1 1889 164 71 22 chr2 34945467 34945538 -218311045 - MSTA LTR MaLR 0 428 362 6477 65 36 1 chr2 34945538 34946586 -218309997 + L1PA6 LINE L1 5074 6150 -4 1889 164 71 22 chr2 34946586 34946922 -218309661 - MSTA LTR MaLR -66 362 1 227 217 47 75 chr2 34947402 34947508 -218309075 - L1MC4a LINE L1 -1867 5941 5839 1625 185 0 30 chr2 34947527 34947825 -218308758 - AluJo SINE Alu -23 289 1 2097 119 0 0 chr2 34947873 34948151 -218308432 - AluSg SINE Alu -32 278 1 518 295 132 28 chr2 34948157 34948520 -218308063 - L1MC4a LINE L1 -1987 5821 5421 1934 168 14 0 chr2 34948573 34948864 -218307719 - AluSx SINE Alu -17 295 1 323 305 75 21 chr2 34948864 34949051 -218307532 - L1MC4a LINE L1 -801 5345 5149 2088 132 72 1 chr2 34949106 34949694 -218306889 + L1M2 LINE L1 4978 5611 -680 5594 112 42 1 chr2 34949694 34951412 -218305171 + L1PA12 LINE L1 4394 6168 0 2088 132 72 1 chr2 34951412 34951434 -218305149 + L1M2 LINE L1 5611 5630 -661 * 7144 172 78 17 chr2 34951426 34952898 -218303685 - L1 LINE L1 -1226 5880 4281 1818 122 15 92 chr2 34952898 34953235 -218303348 + AluSq SINE Alu 3 313 0 7144 172 78 17 chr2 34953235 34953540 -218303043 - L1 LINE L1 -2825 4281 3996 1524 250 34 17 chr2 34953593 34954309 -218302274 - L1 LINE L1 -4520 2517 1780 1937 251 47 41 chr2 34954312 34954993 -218301590 - L1 LINE L1 -6281 749 65 22 0 0 0 chr2 34955136 34955158 -218301425 + AT_rich Low_complexity Low_complexity 1 22 0 230 194 42 14 chr2 34955419 34955491 -218301092 + (TA)n Simple_repeat Simple_repeat 1 74 0 271 290 71 4 chr2 34955505 34955774 -218300809 - L1M4 LINE L1 -3128 3018 2732 2283 115 3 0 chr2 34956006 34956311 -218300272 - AluSg SINE Alu -4 306 1 1122 221 13 77 chr2 34956338 34956637 -218299946 - AluJo SINE Alu -30 282 3 205 194 0 0 chr2 34957132 34957168 -218299415 + T-rich Low_complexity Low_complexity 4 39 0 298 250 56 0 chr2 34957206 34957278 -218299305 - MER6B DNA MER2_type -5 205 130 23 33 0 0 chr2 34957279 34957309 -218299274 + AT_rich Low_complexity Low_complexity 1 30 0 4617 94 50 20 chr2 34957313 34958029 -218298554 - L1PA13 LINE L1 -4 6159 5422 3191 173 73 10 chr2 34958029 34958746 -218297837 + LTR1B LTR ERV1 8 785 0 3196 151 2 3 chr2 34958746 34959407 -218297176 - L1P4 LINE L1 -736 5432 4772 727 189 13 20 chr2 34959407 34959560 -218297023 - MER6B DNA MER2_type -58 152 1 231 217 0 0 chr2 34959758 34959818 -218296765 - HAL1b LINE L1 -593 755 696 261 210 16 16 chr2 34960114 34960176 -218296407 + MLT1K LTR MaLR 188 249 -339 191 125 25 0 chr2 34960211 34960251 -218296332 + GA-rich Low_complexity Low_complexity 2 42 0 267 31 0 0 chr2 34963267 34963299 -218293284 + (TG)n Simple_repeat Simple_repeat 2 33 0 432 299 51 10 chr2 34963339 34963524 -218293059 - MIR3 SINE MIR -3 205 14 2450 176 18 29 chr2 34963662 34964214 -218292369 - L1MA10 LINE L1 0 6334 5789 4570 257 64 37 chr2 34964240 34964940 -218291643 - L1MEc LINE L1 -3263 2952 2272 1369 220 24 30 chr2 34964940 34965236 -218291347 + AluJb SINE Alu 1 294 -18 4570 257 64 37 chr2 34965236 34965673 -218290910 - L1MEc LINE L1 -3943 2272 1848 2486 70 0 6 chr2 34965673 34965986 -218290597 + AluY SINE Alu 1 311 0 4570 257 64 37 chr2 34965986 34966194 -218290389 - L1MEc LINE L1 -4367 1848 1647 587 215 15 8 chr2 34966194 34966324 -218290259 - FLAM_A SINE Alu -2 131 1 4570 257 64 37 chr2 34966324 34967804 -218288779 - L1MEc LINE L1 -4568 1647 69 1812 98 55 4 chr2 34968375 34968631 -218287952 + AluSg SINE Alu 26 294 -16 22 35 0 0 chr2 34969114 34969143 -218287440 + AT_rich Low_complexity Low_complexity 1 29 0 471 263 165 10 chr2 34969209 34969403 -218287180 - MIR SINE MIR -27 235 12 206 233 117 0 chr2 34970258 34970318 -218286265 - MIR SINE MIR -77 185 119 208 370 108 0 chr2 34971520 34971655 -218284928 + MIR SINE MIR 23 176 -86 1677 118 19 11 chr2 34971660 34971930 -218284653 - MER1A DNA MER1_type 0 529 258 5861 171 25 16 chr2 34971931 34973275 -218283308 + L1PB1 LINE L1 3977 5361 -790 2211 116 0 13 chr2 34973275 34973577 -218283006 - AluSq SINE Alu -15 298 1 5861 171 25 16 chr2 34973577 34974368 -218282215 + L1PB1 LINE L1 5361 6143 -8 1623 157 12 0 chr2 34974375 34974630 -218281953 - MER1A DNA MER1_type -269 258 1 2143 98 4 0 chr2 34974930 34975207 -218281376 + AluY SINE Alu 1 278 -33 299 23 47 0 chr2 34975209 34975252 -218281331 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 245 234 16 16 chr2 34975777 34975841 -218280742 + L2 LINE L2 3209 3272 0 284 291 91 15 chr2 34975954 34976153 -218280430 + L2 LINE L2 2841 3054 -218 2261 217 82 4 chr2 34976166 34976479 -218280104 + MLT1E LTR MaLR 10 297 -296 390 42 0 0 chr2 34976479 34976527 -218280056 + (CATA)n Simple_repeat Simple_repeat 2 49 0 2261 217 82 4 chr2 34976527 34976753 -218279830 + MLT1E LTR MaLR 297 591 -2 263 286 29 0 chr2 34976873 34976943 -218279640 + MIR SINE MIR 74 145 -117 196 278 43 11 chr2 34977707 34977820 -218278763 - MIR3 SINE MIR 0 262 122 677 280 91 12 chr2 34977933 34978176 -218278407 + MIR SINE MIR 1 262 0 207 227 0 0 chr2 34978249 34978293 -218278290 - MIR SINE MIR -110 152 109 2349 77 3 3 chr2 34978329 34978629 -218277954 + AluY SINE Alu 1 300 -11 341 306 0 0 chr2 34979089 34979174 -218277409 - L2 LINE L2 0 3313 3229 555 304 254 25 chr2 34979470 34980412 -218276171 - L2 LINE L2 -428 2886 1730 607 274 59 59 chr2 34980546 34980834 -218275749 + MLT1I LTR MaLR 40 327 -82 783 218 16 71 chr2 34980973 34981225 -218275358 + MLT2B1 LTR ERVL 283 520 0 260 167 0 42 chr2 34981287 34981335 -218275248 - MIR SINE MIR -62 146 101 772 159 16 8 chr2 34983600 34983726 -218272857 - FLAM_C SINE Alu -16 127 1 249 33 0 0 chr2 34984232 34984262 -218272321 + (CA)n Simple_repeat Simple_repeat 2 31 0 214 323 20 10 chr2 34984590 34984689 -218271894 + L2 LINE L2 2211 2310 -1004 251 287 82 8 chr2 34984732 34984854 -218271729 + MLT2C1 LTR ERVL 69 199 -198 * 602 229 133 49 chr2 34984750 34985107 -218271476 + MLT1E2 LTR MaLR 59 429 -76 494 285 90 38 chr2 34985102 34985369 -218271214 + MER45C DNA AcHobo 320 600 -353 * 2408 96 3 0 chr2 34985776 34986077 -218270506 + AluSp SINE Alu 1 302 -11 217 247 103 62 chr2 34986144 34986241 -218270342 + MIR SINE MIR 43 143 -65 310 329 19 19 chr2 34988493 34988654 -218267929 - MLT1J2 LTR MaLR -22 428 268 2535 51 19 0 chr2 34988752 34989065 -218267518 + L1PA5 LINE L1 5828 6146 -8 197 404 43 11 chr2 34989209 34989303 -218267280 - L2 LINE L2 -29 3243 3147 321 286 53 8 chr2 34989789 34989922 -218266661 - L1ME4a LINE L1 -1 6120 5982 2451 212 29 27 chr2 34990958 34991511 -218265072 + MLT2B3 LTR ERVL 1 554 0 522 256 28 17 chr2 34991766 34991942 -218264641 + MER5B DNA MER1_type 1 178 0 538 225 11 120 chr2 34992178 34992369 -218264214 - MER5B DNA MER1_type -8 170 1 22 0 0 0 chr2 34993598 34993620 -218262963 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr2 34994722 34994745 -218261838 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2406 95 0 0 chr2 34995229 34995534 -218261049 - AluSc SINE Alu -4 305 1 21 0 0 0 chr2 34996002 34996023 -218260560 + AT_rich Low_complexity Low_complexity 1 21 0 1975 121 0 0 chr2 34996449 34996713 -218259870 + AluSg SINE Alu 1 264 -46 221 0 35 0 chr2 34996713 34996742 -218259841 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 276 220 0 0 chr2 34997445 34997504 -218259079 - L2 LINE L2 0 3313 3255 339 285 152 7 chr2 34997670 34997821 -218258762 - MIR3 SINE MIR -6 202 30 338 305 26 63 chr2 34998140 34998330 -218258253 - MIR3 SINE MIR -3 205 23 1184 120 89 13 chr2 34998585 34998737 -218257846 + L1MA9 LINE L1 6069 6245 -67 207 0 0 0 chr2 34998737 34998760 -218257823 + (TA)n Simple_repeat Simple_repeat 2 24 0 1184 120 89 13 chr2 34998760 34998832 -218257751 + L1MA9 LINE L1 6245 6310 -2 2190 82 4 0 chr2 34999679 34999988 -218256595 - AluY SINE Alu 0 310 1 2530 80 0 0 chr2 34999988 35000299 -218256284 - AluY SINE Alu 0 311 1 180 0 0 0 chr2 35000466 35000486 -218256097 + (T)n Simple_repeat Simple_repeat 1 20 0 181 356 41 0 chr2 35000647 35000720 -218255863 - MIR SINE MIR -78 130 55 258 276 26 78 chr2 35001074 35001160 -218255423 - MIR SINE MIR -85 177 97 2422 71 0 10 chr2 35001160 35001468 -218255115 + AluY SINE Alu 1 305 -6 258 276 26 78 chr2 35001468 35001497 -218255086 - MIR SINE MIR -165 97 68 21 0 0 0 chr2 35002056 35002077 -218254506 + AT_rich Low_complexity Low_complexity 1 21 0 2504 67 0 0 chr2 35002998 35003298 -218253285 - AluSg1 SINE Alu -9 300 1 2098 112 3 10 chr2 35003539 35003834 -218252749 + AluSx SINE Alu 1 293 -19 502 211 116 60 chr2 35004198 35004373 -218252210 - MER5A DNA MER1_type 0 189 4 267 245 75 31 chr2 35004509 35004607 -218251976 - MIR SINE MIR -65 143 39 328 317 75 60 chr2 35004727 35004926 -218251657 + HAL1 LINE L1 46 247 -2260 532 176 9 76 chr2 35005514 35005649 -218250934 - L1MB4 LINE L1 -29 6151 6026 2355 86 3 3 chr2 35005649 35005951 -218250632 + AluY SINE Alu 1 302 -9 532 176 9 76 chr2 35005951 35005974 -218250609 - L1MB4 LINE L1 -154 6026 6003 1884 186 52 31 chr2 35005976 35006423 -218250160 - L1MB4 LINE L1 -354 5830 5375 1971 110 92 7 chr2 35006512 35006793 -218249790 - AluSg SINE Alu -5 305 1 23 0 0 0 chr2 35007246 35007269 -218249314 + AT_rich Low_complexity Low_complexity 1 23 0 2503 144 18 38 chr2 35007721 35007781 -218248802 + Tigger2a DNA MER2_type 1 61 -2647 2307 70 0 55 chr2 35007781 35008108 -218248475 - AluY SINE Alu -2 309 1 2503 144 18 38 chr2 35008108 35008490 -218248093 + Tigger2a DNA MER2_type 61 434 0 393 282 141 37 chr2 35008540 35008733 -218247850 + MIR SINE MIR 16 224 -38 977 175 105 15 chr2 35008737 35008937 -218247646 - MER20 DNA MER1_type -1 218 1 21113 153 41 8 chr2 35009408 35013905 -218242678 - L1 LINE L1 -2892 4673 16 434 297 47 0 chr2 35014395 35014523 -218242060 + MIR3 SINE MIR 68 201 -7 568 188 30 10 chr2 35015271 35015372 -218241211 + FRAM SINE Alu 47 149 -27 978 47 78 0 chr2 35016047 35016176 -218240407 - MER85 DNA T2_type 0 139 1 322 219 49 0 chr2 35016917 35016999 -218239584 + LTR50 LTR ERVL 710 795 0 391 276 41 0 chr2 35017563 35017686 -218238897 + MER58B DNA MER1_type 211 338 -3 539 208 0 0 chr2 35017742 35017838 -218238745 - MER58A DNA MER1_type -10 97 2 2642 137 38 13 chr2 35018785 35019260 -218237323 - Tigger1 DNA MER2_type -2 2416 1930 2519 123 21 9 chr2 35019257 35019689 -218236894 - Tigger1 DNA MER2_type -1291 1127 691 * 3973 116 44 54 chr2 35019697 35020404 -218236179 - MER4E LTR ERV1 -61 718 17 2239 125 0 0 chr2 35020404 35020701 -218235882 + AluSg SINE Alu 1 297 -13 3973 116 44 54 chr2 35020701 35020718 -218235865 - MER4E LTR ERV1 -762 17 1 3627 160 19 25 chr2 35020718 35021412 -218235171 - Tigger1 DNA MER2_type -1728 690 1 792 187 21 16 chr2 35021429 35021616 -218234967 - MER53 DNA DNA -1 188 1 1937 154 20 3 chr2 35021664 35021969 -218234614 + AluSx SINE Alu 1 310 -2 417 293 47 54 chr2 35022097 35022350 -218234233 + MIR SINE MIR 4 250 -12 184 327 0 18 chr2 35023137 35023192 -218233391 - L2 LINE L2 -194 3078 3025 440 151 0 0 chr2 35024464 35024550 -218232033 - MER2 DNA MER2_type -136 209 124 1271 106 11 6 chr2 35024550 35024729 -218231854 + AluSg/x SINE Alu 125 304 -8 635 205 16 0 chr2 35024730 35024857 -218231726 - MER2 DNA MER2_type -216 129 1 1484 228 11 76 chr2 35025655 35025762 -218230821 + Zaphod DNA AcHobo 8 120 -3911 4162 161 52 2 chr2 35025762 35026555 -218230028 + L1MA8 LINE L1 5442 6273 -18 1484 228 11 76 chr2 35026555 35026828 -218229755 + Zaphod DNA AcHobo 120 363 -3668 326 247 67 40 chr2 35026848 35026998 -218229585 - MLT2E LTR ERVL 0 628 475 310 348 7 14 chr2 35027164 35027302 -218229281 - MLT2E LTR ERVL -459 169 33 403 75 0 0 chr2 35027749 35027802 -218228781 + Charlie3 DNA MER1_type 2650 2702 -8 1938 177 3 23 chr2 35027870 35028214 -218228369 - MER1B DNA MER1_type 0 337 1 1758 299 62 22 chr2 35028245 35029581 -218227002 - ERVL LTR ERVL -1462 4302 2817 399 247 0 0 chr2 35029583 35029676 -218226907 - MER58C DNA MER1_type -1 214 122 359 207 37 0 chr2 35029704 35029786 -218226797 - MER58C DNA MER1_type -85 130 46 811 263 57 32 chr2 35029812 35029972 -218226611 - MER5C DNA MER1_type 0 324 170 2315 76 7 0 chr2 35029972 35030261 -218226322 + AluY SINE Alu 5 295 -16 252 0 0 0 chr2 35030262 35030290 -218226293 + (TA)n Simple_repeat Simple_repeat 1 28 0 811 263 57 32 chr2 35030290 35030443 -218226140 - MER5C DNA MER1_type -153 171 1 426 316 75 0 chr2 35030444 35030618 -218225965 - ERVL LTR ERVL -2943 2821 2635 561 292 85 6 chr2 35030647 35030918 -218225665 - ERVL LTR ERVL -2922 2563 2300 1976 131 7 10 chr2 35031504 35031809 -218224774 - AluSx SINE Alu -8 304 1 354 275 11 0 chr2 35032148 35032239 -218224344 + Zaphod DNA AcHobo 3939 4030 -1 450 331 22 0 chr2 35032777 35032913 -218223670 - MIR3 SINE MIR -50 158 20 183 80 0 0 chr2 35033083 35033108 -218223475 + (CA)n Simple_repeat Simple_repeat 2 26 0 704 206 38 16 chr2 35034863 35035047 -218221536 + MER53 DNA DNA 1 188 -1 500 293 63 29 chr2 35035642 35035848 -218220735 - MIR SINE MIR -10 252 42 290 250 125 21 chr2 35036343 35036439 -218220144 - L2 LINE L2 -9 3263 3158 4455 189 31 17 chr2 35037902 35038642 -218217941 - L1MB8 LINE L1 -5 6173 5410 438 20 0 0 chr2 35038642 35038693 -218217890 + (TG)n Simple_repeat Simple_repeat 2 52 0 4455 189 31 17 chr2 35038693 35039203 -218217380 - L1MB8 LINE L1 -768 5410 4909 1212 235 32 50 chr2 35039473 35039568 -218217015 - MLT1A1 LTR MaLR -2 363 268 4452 48 67 0 chr2 35039568 35040135 -218216448 - L1PA5 LINE L1 -5 6149 5545 1212 235 32 50 chr2 35040135 35040379 -218216204 - MLT1A1 LTR MaLR -97 268 30 22 56 0 0 chr2 35040773 35040809 -218215774 + AT_rich Low_complexity Low_complexity 1 36 0 4615 162 69 15 chr2 35040812 35042359 -218214224 - L1MA8 LINE L1 -25 6266 4598 2292 48 10 7 chr2 35042359 35042650 -218213933 + L1PA5 LINE L1 5857 6148 -6 4615 162 69 15 chr2 35042650 35042950 -218213633 - L1MA8 LINE L1 -1693 4598 4316 2434 72 0 3 chr2 35043139 35043444 -218213139 + AluY SINE Alu 1 304 -7 4619 130 9 16 chr2 35043623 35044371 -218212212 - L1PA13 LINE L1 -2 6161 5419 626 93 0 10 chr2 35044371 35044468 -218212115 - L1MA8 LINE L1 -1812 4334 4239 548 264 69 44 chr2 35044500 35044818 -218211765 - Charlie2 DNA MER1_type -559 2303 1978 1105 230 113 2 chr2 35044871 35045297 -218211286 + Charlie2 DNA MER1_type 2317 2789 -73 2329 83 10 3 chr2 35045297 35045598 -218210985 - AluY SINE Alu -6 305 3 1310 237 191 49 chr2 35045951 35046058 -218210525 + L1MDa LINE L1 2530 2620 -3920 1822 144 31 10 chr2 35046058 35046350 -218210233 - AluSx SINE Alu -12 300 3 1310 237 191 49 chr2 35046350 35047118 -218209465 + L1MDa LINE L1 2620 3529 -3011 921 287 115 13 chr2 35047142 35047300 -218209283 + L1MDa LINE L1 3571 3712 -2828 2231 118 0 3 chr2 35047300 35047613 -218208970 + AluSx SINE Alu 1 312 0 921 287 115 13 chr2 35047613 35047862 -218208721 + L1MDa LINE L1 3712 3934 -2606 3462 170 74 12 chr2 35047862 35048526 -218208057 - MER44D DNA MER2_type 0 705 1 921 287 115 13 chr2 35048526 35048726 -218207857 + L1MDa LINE L1 3934 4241 -2299 360 0 0 0 chr2 35048813 35048853 -218207730 + (CA)n Simple_repeat Simple_repeat 2 41 0 778 291 47 0 chr2 35049018 35049231 -218207352 + MER58A DNA MER1_type 2 224 0 834 299 70 80 chr2 35049250 35049908 -218206675 + L2 LINE L2 2437 3148 -165 216 0 0 0 chr2 35050058 35050082 -218206501 + (TG)n Simple_repeat Simple_repeat 1 24 0 1321 98 0 0 chr2 35050429 35050602 -218205981 - AluSp SINE Alu -9 304 132 189 0 0 0 chr2 35051831 35051852 -218204731 + (TA)n Simple_repeat Simple_repeat 1 21 0 3612 45 7 0 chr2 35051852 35052298 -218204285 - L1PA5 LINE L1 -5 6149 5701 206 351 91 0 chr2 35052760 35052837 -218203746 - MIR SINE MIR -163 99 16 389 291 25 49 chr2 35053079 35053282 -218203301 - L2 LINE L2 -4 3309 3112 1060 274 28 3 chr2 35053307 35053592 -218202991 - LTR16A LTR ERVL -1 449 158 187 285 77 54 chr2 35053624 35053754 -218202829 - L2 LINE L2 -1515 1799 1667 2107 156 52 31 chr2 35054394 35054936 -218201647 - MLT2A2 LTR ERVL 0 554 1 1214 336 97 28 chr2 35055018 35056142 -218200441 - L2 LINE L2 -1 3312 2097 758 270 66 37 chr2 35056227 35056388 -218200195 - MIR SINE MIR 0 262 90 1773 200 5 19 chr2 35056388 35056758 -218199825 + MLT1A1 LTR MaLR 1 365 0 758 270 66 37 chr2 35056758 35056837 -218199746 - MIR SINE MIR -172 90 15 1191 252 96 26 chr2 35057488 35058160 -218198423 + LTR50 LTR ERVL 1 795 0 1732 207 39 0 chr2 35058233 35058590 -218197993 - MLT1E1 LTR MaLR -281 373 3 2296 144 59 12 chr2 35059606 35060015 -218196568 - MSTA LTR MaLR 0 428 1 232 349 28 0 chr2 35061877 35061983 -218194600 + MER5B DNA MER1_type 19 127 -51 2532 240 71 62 chr2 35062027 35063263 -218193320 - L1MC5 LINE L1 -57 7904 6658 * 6385 148 27 4 chr2 35063261 35064522 -218192061 - L1MC1 LINE L1 -19 6314 5023 783 321 144 24 chr2 35064666 35065165 -218191418 + MLT1G1 LTR MaLR 1 559 -36 488 201 39 26 chr2 35065195 35065211 -218191372 - L1MA10 LINE L1 0 6334 6319 2448 214 33 86 chr2 35065211 35065893 -218190690 - L1ME1 LINE L1 -5 6161 5532 2316 57 54 3 chr2 35065893 35066189 -218190394 + AluY SINE Alu 1 311 0 2448 214 33 86 chr2 35066189 35066464 -218190119 - L1ME1 LINE L1 -634 5532 5244 201 138 0 0 chr2 35066756 35066785 -218189798 + (TC)n Simple_repeat Simple_repeat 2 30 0 14024 127 46 14 chr2 35066877 35069220 -218187363 + Tigger1 DNA MER2_type 1 2418 0 408 335 78 52 chr2 35069618 35070039 -218186544 - HAL1b LINE L1 -878 470 39 27 0 0 0 chr2 35070757 35070784 -218185799 + AT_rich Low_complexity Low_complexity 1 27 0 5014 39 0 15 chr2 35070784 35071397 -218185186 - L1PA5 LINE L1 -19 6135 5532 203 279 33 16 chr2 35071711 35071772 -218184811 + MER5B DNA MER1_type 111 172 -6 280 250 56 83 chr2 35071795 35071939 -218184644 + MIR SINE MIR 77 216 -46 186 103 0 0 chr2 35072290 35072319 -218184264 + (CAA)n Simple_repeat Simple_repeat 1 29 0 768 256 122 89 chr2 35073385 35073447 -218183136 + MLT1J LTR MaLR 2 60 -451 2349 85 0 16 chr2 35073447 35073763 -218182820 - AluY SINE Alu 0 311 1 768 256 122 89 chr2 35073763 35074185 -218182398 + MLT1J LTR MaLR 60 502 -9 384 261 197 14 chr2 35074407 35074549 -218182034 - MER5A DNA MER1_type -3 186 19 2049 143 3 0 chr2 35075494 35075794 -218180789 - AluSx SINE Alu -11 301 1 420 359 62 48 chr2 35075822 35076382 -218180201 - L1MEc LINE L1 -4207 2189 1622 446 240 41 36 chr2 35076383 35076546 -218180037 - LTR40c LTR ERVL -155 310 164 432 0 0 0 chr2 35076546 35076594 -218179989 + (CA)n Simple_repeat Simple_repeat 2 49 0 1233 122 89 24 chr2 35077084 35077331 -218179252 - L1MA8 LINE L1 -4 6287 6025 1888 179 48 68 chr2 35078441 35078956 -218177627 + MLT1D LTR MaLR 1 505 0 37 23 0 0 chr2 35079223 35079267 -218177316 + AT_rich Low_complexity Low_complexity 1 44 0 1337 265 71 6 chr2 35079780 35080131 -218176452 - MLT1A2 LTR MaLR 0 374 1 273 277 181 58 chr2 35080381 35080536 -218176047 - MER5A DNA MER1_type -1 188 15 320 264 55 0 chr2 35080639 35080730 -218175853 + MER5A DNA MER1_type 17 112 -77 193 321 117 36 chr2 35080844 35080981 -218175602 + MER5B DNA MER1_type 31 178 0 1971 219 46 67 chr2 35082435 35082656 -218173927 + MLT2B3 LTR ERVL 1 225 -329 2251 105 36 33 chr2 35082656 35083019 -218173564 - THE1B LTR MaLR 0 364 1 1971 219 46 67 chr2 35083019 35083363 -218173220 + MLT2B3 LTR ERVL 225 554 0 5871 38 6 0 chr2 35084712 35085424 -218171159 - L1PA4 LINE L1 0 6155 5440 694 138 121 0 chr2 35086000 35086116 -218170467 + AluJo SINE Alu 5 134 -178 2136 113 34 0 chr2 35086795 35087088 -218169495 - AluSq SINE Alu -4 309 7 1659 116 0 40 chr2 35087087 35087337 -218169246 - AluSp SINE Alu -73 240 1 * 234 0 0 0 chr2 35089099 35089125 -218167458 + (T)n Simple_repeat Simple_repeat 1 26 0 1581 41 0 21 chr2 35089431 35089625 -218166958 - SVA Other Other 0 1386 1197 244 47 23 23 chr2 35189663 35189706 -218066877 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1782 169 0 10 chr2 35189716 35190006 -218066577 - AluJo SINE Alu -25 287 1 2784 68 0 8 chr2 35190083 35190451 -218066132 - L1PA13 LINE L1 -19 6144 5780 929 258 73 21 chr2 35190492 35190918 -218065665 - L1M4 LINE L1 -2164 3982 3535 430 262 86 64 chr2 35191068 35191381 -218065202 - L1M4 LINE L1 -2652 3494 3175 372 253 116 47 chr2 35192875 35193065 -218063518 + L2 LINE L2 3109 3311 -2 600 273 44 34 chr2 35193241 35193446 -218063137 - MER63A DNA MER1_type 0 210 4 2220 113 0 0 chr2 35194140 35194433 -218062150 + AluSq SINE Alu 1 293 -20 2078 116 7 0 chr2 35194733 35195017 -218061566 + AluSp SINE Alu 3 288 -25 261 282 129 0 chr2 35195271 35195356 -218061227 + MIR SINE MIR 59 154 -108 614 272 0 0 chr2 35195438 35195574 -218061009 - MIR SINE MIR -88 174 39 251 376 10 0 chr2 35196577 35196678 -218059905 + L1MEd LINE L1 622 723 -5482 409 288 83 72 chr2 35196722 35197255 -218059328 + L1MEd LINE L1 790 1287 -4918 285 271 42 96 chr2 35197271 35197502 -218059081 + L1MEd LINE L1 1300 1503 -4712 453 36 0 0 chr2 35197502 35197557 -218059026 + (CA)n Simple_repeat Simple_repeat 1 55 0 285 271 42 96 chr2 35197557 35197709 -218058874 + L1MEd LINE L1 1503 1662 -4553 226 176 20 0 chr2 35197946 35197997 -218058586 + L1MEd LINE L1 2030 2081 -4315 310 286 12 0 chr2 35197998 35198082 -218058501 + (TA)n Simple_repeat Simple_repeat 2 86 0 477 331 22 7 chr2 35198610 35198879 -218057704 + L1M4 LINE L1 4906 5178 -968 401 326 160 16 chr2 35199836 35200149 -218056434 - L2 LINE L2 0 3313 2956 404 276 198 37 chr2 35200202 35200445 -218056138 - L2 LINE L2 -459 2855 2574 267 218 69 30 chr2 35201917 35202018 -218054565 - L1ME LINE L1 -239 5882 5778 298 346 43 21 chr2 35202038 35202226 -218054357 - MIR SINE MIR -18 244 53 2190 56 0 4 chr2 35202534 35202800 -218053783 - AluY SINE Alu -12 299 35 321 321 36 9 chr2 35203315 35203427 -218053156 - HAL1b LINE L1 -673 675 561 254 95 24 0 chr2 35203791 35203833 -218052750 + (TA)n Simple_repeat Simple_repeat 1 43 0 322 305 39 123 chr2 35204116 35204523 -218052060 - L2 LINE L2 0 3313 2941 4970 46 10 1 chr2 35204892 35205575 -218051008 + L1PA6 LINE L1 5203 5890 -264 1453 88 88 0 chr2 35205753 35205969 -218050614 + L1PA6 LINE L1 5917 6151 -3 2127 120 7 3 chr2 35206211 35206511 -218050072 + AluSx SINE Alu 1 301 -11 1148 153 31 0 chr2 35206567 35206763 -218049820 - Tigger3b DNA MER2_type -751 480 279 2425 133 77 12 chr2 35206768 35207173 -218049410 + MSTB1 LTR MaLR 2 432 0 1437 181 25 25 chr2 35207175 35207457 -218049126 - Tigger3b DNA MER2_type -949 282 1 706 224 58 5 chr2 35207457 35207662 -218048921 - L1ME2 LINE L1 -262 5902 5687 196 241 19 74 chr2 35208697 35208751 -218047832 + L2 LINE L2 3189 3239 -74 2037 156 47 3 chr2 35208761 35209126 -218047457 - L1PB4 LINE L1 -12 6144 5764 189 74 0 0 chr2 35209681 35209708 -218046875 + (TGGA)n Simple_repeat Simple_repeat 2 28 0 468 319 59 13 chr2 35211225 35211463 -218045120 + HERVL LTR ERVL 1106 1354 -3642 529 352 56 27 chr2 35211482 35212080 -218044503 + HERVL LTR ERVL 1520 2101 -3553 288 310 177 0 chr2 35212183 35212341 -218044242 + LTR16A1 LTR ERVL 266 451 -6 207 0 0 0 chr2 35213191 35213214 -218043369 + (TG)n Simple_repeat Simple_repeat 1 23 0 241 254 14 14 chr2 35213214 35213278 -218043305 + GA-rich Low_complexity Low_complexity 6 72 0 696 284 121 26 chr2 35213710 35214023 -218042560 + MLT1J LTR MaLR 3 345 -166 5101 24 2 2 chr2 35214040 35214665 -218041918 - L1PA3 LINE L1 -752 5394 4770 6302 28 21 0 chr2 35214665 35215403 -218041180 + L1PA3 LINE L1 5397 6155 0 2115 114 3 10 chr2 35215810 35216109 -218040474 - AluSq SINE Alu -16 297 1 23 0 0 0 chr2 35216227 35216250 -218040333 + AT_rich Low_complexity Low_complexity 1 23 0 239 340 0 11 chr2 35216652 35216746 -218039837 + A-rich Low_complexity Low_complexity 4 96 0 206 128 26 0 chr2 35217496 35217535 -218039048 + (TG)n Simple_repeat Simple_repeat 2 41 0 479 322 56 6 chr2 35217761 35217941 -218038642 - MIR SINE MIR -51 211 23 792 192 37 44 chr2 35217942 35218339 -218038244 + L1MC3 LINE L1 6762 7160 -625 2345 87 0 10 chr2 35218339 35218651 -218037932 + AluSc SINE Alu 1 309 0 792 192 37 44 chr2 35218651 35219147 -218037436 + L1MC3 LINE L1 7160 7776 -9 1858 108 0 8 chr2 35219596 35219855 -218036728 - AluSq SINE Alu 0 313 57 184 290 10 80 chr2 35220391 35220491 -218036092 + MIR SINE MIR 120 212 -50 3190 177 38 11 chr2 35220582 35221209 -218035374 + LTR48B LTR ERV1 1 644 0 223 304 43 54 chr2 35223538 35223630 -218032953 + L2 LINE L2 3196 3286 -27 2448 82 0 0 chr2 35224086 35224392 -218032191 - AluY SINE Alu -5 306 1 204 40 0 0 chr2 35224987 35225012 -218031571 + (TG)n Simple_repeat Simple_repeat 2 26 0 24 0 0 0 chr2 35225660 35225684 -218030899 + AT_rich Low_complexity Low_complexity 1 24 0 2472 77 0 10 chr2 35225796 35226108 -218030475 - AluSc SINE Alu 0 309 1 1824 76 4 12 chr2 35227533 35227783 -218028800 + L1PA7 LINE L1 5906 6153 -1 216 0 0 0 chr2 35227970 35227994 -218028589 + (T)n Simple_repeat Simple_repeat 1 24 0 196 333 26 87 chr2 35228803 35228998 -218027585 - MIR3 SINE MIR -10 198 16 291 300 28 9 chr2 35229707 35229833 -218026750 + CT-rich Low_complexity Low_complexity 2 220 0 466 318 94 79 chr2 35229875 35230278 -218026305 + L2 LINE L2 1937 2332 -982 531 178 54 23 chr2 35230278 35230407 -218026176 + MER94 DNA DNA 2 134 0 466 318 94 79 chr2 35230407 35230829 -218025754 + L2 LINE L2 2332 2775 -539 25 31 0 0 chr2 35231007 35231039 -218025544 + AT_rich Low_complexity Low_complexity 1 32 0 230 234 47 16 chr2 35231828 35231892 -218024691 + MIR SINE MIR 20 85 -177 258 180 0 0 chr2 35232717 35232778 -218023805 + (TG)n Simple_repeat Simple_repeat 1 61 0 729 301 106 43 chr2 35233658 35234510 -218022073 + L2 LINE L2 2358 3275 -38 359 298 116 9 chr2 35235984 35236123 -218020460 - MIR SINE MIR -74 188 37 2386 69 3 7 chr2 35236523 35236829 -218019754 - AluY SINE Alu -6 305 1 327 266 0 0 chr2 35236910 35237023 -218019560 + (TG)n Simple_repeat Simple_repeat 1 113 0 407 304 0 0 chr2 35237734 35237826 -218018757 + MIR SINE MIR 1 92 -170 402 311 8 0 chr2 35238278 35238397 -218018186 + MER5A DNA MER1_type 4 123 -66 260 246 0 0 chr2 35238489 35238546 -218018037 + Charlie7 DNA MER1_type 38 94 -2518 270 85 51 17 chr2 35238632 35238691 -218017892 + (CATA)n Simple_repeat Simple_repeat 2 62 0 5112 89 18 5 chr2 35238704 35239446 -218017137 + L1MA1 LINE L1 5548 6298 -4 26 0 0 0 chr2 35239446 35239472 -218017111 + AT_rich Low_complexity Low_complexity 1 26 0 398 210 65 0 chr2 35240439 35240563 -218016020 + L1ME2 LINE L1 4453 4584 -1562 1874 184 35 11 chr2 35240930 35241306 -218015277 - MLT1B LTR MaLR 0 390 6 993 243 15 26 chr2 35241393 35241665 -218014918 + MLT1C LTR MaLR 15 283 -184 756 254 137 19 chr2 35241666 35242032 -218014551 + L1ME2 LINE L1 4688 5096 -1050 2239 233 61 48 chr2 35242040 35242829 -218013754 + L1ME2 LINE L1 5348 6146 -18 1226 165 65 4 chr2 35242864 35243094 -218013489 + L1MB5 LINE L1 464 707 -6782 2206 109 0 0 chr2 35243508 35243802 -218012781 + AluSc SINE Alu 1 294 -15 22 0 0 0 chr2 35244173 35244195 -218012388 + AT_rich Low_complexity Low_complexity 1 22 0 1261 205 54 37 chr2 35245482 35246052 -218010531 + L1MB5 LINE L1 3362 3941 -3624 * 4001 194 30 21 chr2 35246049 35246281 -218010302 + L1MB5 LINE L1 6427 6655 -938 1776 155 43 25 chr2 35246281 35246649 -218009934 - THE1C LTR MaLR 0 375 1 4001 194 30 21 chr2 35246649 35247519 -218009064 + L1MB5 LINE L1 6655 7542 -51 1414 275 78 5 chr2 35247691 35248117 -218008466 + LTR16B LTR ERVL 8 464 0 21 0 0 0 chr2 35249510 35249531 -218007052 + AT_rich Low_complexity Low_complexity 1 21 0 233 0 0 59 chr2 35251891 35251925 -218004658 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 1179 142 0 17 chr2 35251956 35252132 -218004451 - AluSx SINE Alu -139 173 1 358 290 174 14 chr2 35252161 35252299 -218004284 - MER5A DNA MER1_type -20 169 10 830 167 93 7 chr2 35252332 35252482 -218004101 + MER46A DNA MER2_type 1 163 -73 322 333 0 37 chr2 35252486 35252621 -218003962 + MER5B DNA MER1_type 33 162 -16 248 313 90 22 chr2 35252732 35252866 -218003717 + MIR SINE MIR 72 214 -48 210 294 81 81 chr2 35252910 35253046 -218003537 + L2 LINE L2 3161 3296 -17 2051 112 44 0 chr2 35253070 35253366 -218003217 - AluSq SINE Alu -4 309 1 233 351 126 9 chr2 35254150 35254261 -218002322 + L2 LINE L2 3189 3312 -1 237 33 0 0 chr2 35254415 35254445 -218002138 + (TG)n Simple_repeat Simple_repeat 2 31 0 456 293 98 18 chr2 35254894 35255058 -218001525 - MIR3 SINE MIR -2 206 30 1939 102 0 8 chr2 35255507 35255771 -218000812 + AluSq SINE Alu 39 300 -13 346 320 202 15 chr2 35255799 35256002 -218000581 - MIR SINE MIR -18 244 4 334 332 114 0 chr2 35256202 35256395 -218000188 + MIR SINE MIR 47 261 -1 2330 104 0 0 chr2 35256484 35256792 -217999791 - AluSx SINE Alu -4 308 1 208 352 36 73 chr2 35257153 35257372 -217999211 + L2 LINE L2 2539 2749 -565 694 24 0 0 chr2 35257381 35257465 -217999118 + L1MA2 LINE L1 6213 6296 -8 1922 126 13 13 chr2 35257539 35257848 -217998735 - AluSx SINE Alu 0 312 4 375 23 0 0 chr2 35257992 35258036 -217998547 + (TTTTA)n Simple_repeat Simple_repeat 1 44 0 2335 57 0 0 chr2 35258037 35258385 -217998198 - AluY SINE Alu 0 348 1 711 264 26 79 chr2 35258512 35258777 -217997806 - MIR SINE MIR -5 257 7 288 339 153 8 chr2 35258850 35258974 -217997609 + L2 LINE L2 3127 3268 -4 387 306 45 65 chr2 35259851 35260050 -217996533 - L3 LINE CR1 -1 1576 1382 212 268 0 0 chr2 35260704 35260745 -217995838 - L2 LINE L2 -8 3264 3224 589 290 30 45 chr2 35260933 35261133 -217995450 - MIR SINE MIR -7 255 59 354 203 27 0 chr2 35263035 35263109 -217993474 + MIR SINE MIR 112 187 -75 2210 120 0 0 chr2 35263357 35263656 -217992927 - AluSx SINE Alu -13 299 1 351 241 0 36 chr2 35263890 35264002 -217992581 + (TATATG)n Simple_repeat Simple_repeat 4 111 0 882 244 64 38 chr2 35264002 35264061 -217992522 - L1ME3 LINE L1 -26 6144 6088 237 65 0 0 chr2 35264061 35264092 -217992491 + (CA)n Simple_repeat Simple_repeat 1 31 0 882 244 64 38 chr2 35264092 35264369 -217992214 - L1ME3 LINE L1 -82 6088 5793 199 256 51 51 chr2 35264679 35264757 -217991826 + L2 LINE L2 3227 3304 -9 23 78 0 0 chr2 35265289 35265340 -217991243 + AT_rich Low_complexity Low_complexity 1 51 0 1424 234 84 42 chr2 35268876 35269438 -217987145 + LTR24B LTR ERV1 1 635 0 513 325 38 19 chr2 35270027 35270236 -217986347 - MIR SINE MIR -32 230 18 336 241 234 19 chr2 35273388 35273546 -217983037 - MIR SINE MIR -10 252 61 1592 299 143 21 chr2 35274489 35275394 -217981189 - HAL1 LINE L1 -1482 1025 11 750 262 159 56 chr2 35275948 35276464 -217980119 - MLT1G LTR MaLR -2 588 20 399 21 0 0 chr2 35276480 35276528 -217980055 + (CA)n Simple_repeat Simple_repeat 1 48 0 2155 104 0 3 chr2 35276596 35276894 -217979689 + AluSq SINE Alu 1 297 -16 186 333 105 9 chr2 35277316 35277421 -217979162 + MIR SINE MIR 77 191 -71 319 349 107 6 chr2 35278296 35278465 -217978118 + MIR SINE MIR 49 234 -28 641 92 10 0 chr2 35278506 35278604 -217977979 + (TCCC)n Simple_repeat Simple_repeat 1 99 0 189 171 0 0 chr2 35278607 35278642 -217977941 + CT-rich Low_complexity Low_complexity 3 37 0 441 218 87 91 chr2 35278667 35278942 -217977641 - L1MC5 LINE L1 -181 7780 7507 435 163 0 23 chr2 35278938 35279024 -217977559 - L1MD3 LINE L1 0 7995 7912 * 331 303 34 83 chr2 35279024 35279492 -217977091 + MER65A LTR ERV1 1 445 0 742 196 112 0 chr2 35279494 35279673 -217976910 - L1MD3 LINE L1 -82 7913 7715 565 220 70 59 chr2 35279793 35280066 -217976517 - L1MC5 LINE L1 -593 7368 7093 4490 170 32 22 chr2 35280216 35281094 -217975489 - L1MC2 LINE L1 -30 6314 5428 853 211 0 0 chr2 35281114 35281256 -217975327 - AluSg/x SINE Alu -37 273 132 1918 157 3 0 chr2 35281256 35281561 -217975022 - AluSx SINE Alu -6 306 1 1658 179 40 19 chr2 35281561 35282083 -217974500 - L1MC2 LINE L1 -743 5403 4914 1008 204 52 69 chr2 35282083 35282492 -217974091 + MLT1A1 LTR MaLR 1 363 -2 701 188 0 7 chr2 35282494 35282638 -217973945 - L1MC2 LINE L1 -1228 4918 4776 184 310 42 111 chr2 35282669 35282895 -217973688 + L3 LINE CR1 1050 1247 -330 2316 100 0 0 chr2 35282895 35283185 -217973398 + AluSx SINE Alu 1 290 -22 184 310 42 111 chr2 35283185 35283290 -217973293 + L3 LINE CR1 1247 1358 -219 2165 133 0 3 chr2 35283436 35283745 -217972838 + AluSx SINE Alu 3 310 -2 21 57 0 0 chr2 35285778 35285813 -217970770 + AT_rich Low_complexity Low_complexity 1 35 0 981 197 90 97 chr2 35287876 35288173 -217968410 + MER110A LTR ERV1 71 369 -99 2224 86 0 0 chr2 35288173 35288451 -217968132 + AluY SINE Alu 1 278 -33 369 0 0 0 chr2 35288451 35288492 -217968091 + (CAA)n Simple_repeat Simple_repeat 2 42 0 981 197 90 97 chr2 35288492 35288594 -217967989 + MER110A LTR ERV1 367 468 0 490 366 20 16 chr2 35289123 35289369 -217967214 + MIR SINE MIR 13 259 -3 208 339 117 44 chr2 35290091 35290271 -217966312 - MIR3 SINE MIR 0 208 16 434 281 55 70 chr2 35290956 35291212 -217965371 - L2 LINE L2 -655 2659 2408 605 324 39 26 chr2 35291380 35291689 -217964894 - L2 LINE L2 -1305 2009 1697 270 56 0 0 chr2 35292561 35292597 -217963986 + (CAA)n Simple_repeat Simple_repeat 1 36 0 619 328 43 21 chr2 35292780 35293106 -217963477 - L2 LINE L2 -1637 1677 1345 458 234 7 97 chr2 35293421 35293575 -217963008 - L2 LINE L2 -1 3312 3173 448 289 114 6 chr2 35293888 35294054 -217962529 - MIR SINE MIR -16 246 63 1994 113 6 3 chr2 35294346 35294657 -217961926 + AluSx SINE Alu 1 312 0 2277 102 0 6 chr2 35294741 35295055 -217961528 + AluSx SINE Alu 1 312 0 182 36 0 36 chr2 35295066 35295094 -217961489 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 642 284 115 82 chr2 35295393 35295560 -217961023 + L2 LINE L2 2590 2750 -563 2082 93 11 0 chr2 35295560 35295864 -217960719 + AluSp SINE Alu 1 307 0 642 284 115 82 chr2 35295864 35296372 -217960211 + L2 LINE L2 2750 3310 -3 21 0 0 0 chr2 35297314 35297335 -217959248 + AT_rich Low_complexity Low_complexity 1 21 0 588 317 65 40 chr2 35297962 35298391 -217958192 + L1MDa LINE L1 1036 1543 -4883 21 57 0 0 chr2 35298739 35298774 -217957809 + AT_rich Low_complexity Low_complexity 1 35 0 245 155 17 0 chr2 35299862 35299920 -217956663 + CT-rich Low_complexity Low_complexity 4 62 0 215 307 79 47 chr2 35300885 35301012 -217955571 + L2 LINE L2 2927 3057 -215 1109 255 82 51 chr2 35301257 35301783 -217954800 - L2 LINE L2 -1 3312 2756 2243 71 30 7 chr2 35301783 35302080 -217954503 - AluY SINE Alu -7 304 1 1109 255 82 51 chr2 35302080 35302135 -217954448 - L2 LINE L2 -557 2756 2704 232 364 36 7 chr2 35303435 35303575 -217953008 - MIR SINE MIR -116 146 3 180 298 48 0 chr2 35303906 35303990 -217952593 + L3 LINE CR1 634 721 -856 180 0 0 0 chr2 35303993 35304013 -217952570 + (TG)n Simple_repeat Simple_repeat 2 21 0 226 309 231 34 chr2 35304676 35304970 -217951613 + L3 LINE CR1 1094 1445 -132 26 50 0 0 chr2 35305912 35305952 -217950631 + AT_rich Low_complexity Low_complexity 1 40 0 27 29 0 0 chr2 35307392 35307426 -217949157 + AT_rich Low_complexity Low_complexity 1 34 0 637 50 0 0 chr2 35308988 35309068 -217947515 + MADE1 DNA Mariner 1 80 0 22 70 0 0 chr2 35309526 35309569 -217947014 + AT_rich Low_complexity Low_complexity 1 43 0 23 0 0 0 chr2 35309654 35309677 -217946906 + AT_rich Low_complexity Low_complexity 1 23 0 386 68 108 40 chr2 35310018 35310092 -217946491 + MADE1 DNA Mariner 2 80 0 662 273 63 10 chr2 35310630 35310747 -217945836 - MER58A DNA MER1_type -2196 224 90 2435 76 0 0 chr2 35310747 35311050 -217945533 + AluY SINE Alu 1 303 -8 662 273 63 10 chr2 35311050 35311137 -217945446 - MER58A DNA MER1_type -2330 90 9 2056 117 0 0 chr2 35311820 35312102 -217944481 + AluSc SINE Alu 1 282 -27 180 0 0 0 chr2 35312105 35312125 -217944458 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 366 221 13 0 chr2 35312502 35312579 -217944004 + AluSg/x SINE Alu 197 274 -26 25 51 0 0 chr2 35312579 35312618 -217943965 + AT_rich Low_complexity Low_complexity 1 39 0 23 33 0 0 chr2 35313273 35313303 -217943280 + AT_rich Low_complexity Low_complexity 1 30 0 184 288 61 0 chr2 35313986 35314052 -217942531 - L2 LINE L2 -649 2665 2596 743 172 0 8 chr2 35315797 35315931 -217940652 + FLAM_C SINE Alu 1 133 0 21 36 0 0 chr2 35316454 35316482 -217940101 + AT_rich Low_complexity Low_complexity 1 28 0 200 217 87 0 chr2 35316485 35316531 -217940052 - L2 LINE L2 -8 3305 3256 2442 30 40 3 chr2 35317709 35318008 -217938575 - AluY SINE Alu 0 311 2 270 0 0 0 chr2 35318142 35318172 -217938411 + (TG)n Simple_repeat Simple_repeat 2 31 0 1298 177 0 0 chr2 35318448 35318657 -217937926 + AluJo SINE Alu 87 295 -17 222 203 51 0 chr2 35318712 35318771 -217937812 + (TAGA)n Simple_repeat Simple_repeat 1 62 0 21 57 0 0 chr2 35319344 35319379 -217937204 + AT_rich Low_complexity Low_complexity 1 35 0 558 191 8 23 chr2 35320671 35320802 -217935781 + L1PA15 LINE L1 6035 6163 -2 26 0 0 0 chr2 35321021 35321047 -217935536 + AT_rich Low_complexity Low_complexity 1 26 0 302 98 20 0 chr2 35321282 35321333 -217935250 + (TCTA)n Simple_repeat Simple_repeat 1 52 0 24 53 0 0 chr2 35322561 35322599 -217933984 + AT_rich Low_complexity Low_complexity 1 38 0 1985 248 96 2 chr2 35322973 35323651 -217932932 + Charlie1 DNA MER1_type 5 2051 -710 293 214 0 22 chr2 35323661 35323750 -217932833 + GA-rich Low_complexity Low_complexity 4 90 0 317 254 15 0 chr2 35323753 35323820 -217932763 + MER21B LTR ERV1 26 93 -770 1828 226 139 62 chr2 35323839 35323891 -217932692 + MER21B LTR ERV1 19 66 -797 2679 14 0 0 chr2 35323891 35324185 -217932398 - AluY SINE Alu -17 294 1 1828 226 139 62 chr2 35324185 35324868 -217931715 + MER21B LTR ERV1 66 810 -53 1567 234 29 83 chr2 35324935 35325401 -217931182 + MER77 LTR ERV1 1 390 -172 2878 191 49 12 chr2 35325415 35326086 -217930497 + Charlie1 DNA MER1_type 2066 2761 0 234 0 0 0 chr2 35326746 35326772 -217929811 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 652 175 31 81 chr2 35327117 35327277 -217929306 - MER4D LTR ERV1 -717 155 4 1113 160 17 25 chr2 35327310 35327509 -217929074 - MER66-int LTR ERV1 -1062 7058 4350 301 179 224 0 chr2 35327483 35327550 -217929033 - MER66-int LTR ERV1 -4088 4032 3951 * 730 158 17 107 chr2 35327730 35327907 -217928676 - MER66-int LTR ERV1 -4174 3946 3786 353 260 63 8 chr2 35328044 35328171 -217928412 - MER66-int LTR ERV1 -2151 4180 4047 2059 181 63 94 chr2 35328172 35329569 -217927014 - MER66-int LTR ERV1 -2512 4164 1210 2425 177 15 9 chr2 35329572 35330035 -217926548 - MER66-int LTR ERV1 -220 1566 1101 671 260 11 88 chr2 35330220 35330505 -217926078 - MER66-int LTR ERV1 -3521 3155 2893 637 189 6 111 chr2 35330720 35330900 -217925683 - MER66-int LTR ERV1 -5760 916 756 1821 209 17 52 chr2 35331437 35331896 -217924687 - MER41B LTR ERV1 -36 599 157 253 136 23 34 chr2 35332210 35332298 -217924285 + (TA)n Simple_repeat Simple_repeat 2 88 0 24 32 0 0 chr2 35333070 35333101 -217923482 + AT_rich Low_complexity Low_complexity 1 31 0 1888 155 0 16 chr2 35333334 35333651 -217922932 - AluSx SINE Alu 0 312 1 839 188 0 0 chr2 35334443 35334581 -217922002 + FLAM_C SINE Alu 1 138 -5 418 237 0 59 chr2 35334952 35335070 -217921513 + L2 LINE L2 3203 3313 0 200 322 11 35 chr2 35335396 35335483 -217921100 - L2 LINE L2 -188 3084 3000 267 67 67 22 chr2 35336339 35336384 -217920199 - L1PA8A LINE L1 -494 5637 5591 468 262 61 65 chr2 35336978 35337257 -217919326 - LTR16B LTR ERVL 0 464 187 210 154 0 0 chr2 35337307 35337346 -217919237 + T-rich Low_complexity Low_complexity 2 40 0 1599 149 4 20 chr2 35337346 35337450 -217919133 - AluSq SINE Alu -62 251 147 5535 67 105 4 chr2 35337450 35338200 -217918383 + LTR12 LTR ERV1 1 826 0 1599 149 4 20 chr2 35338200 35338344 -217918239 - AluSq SINE Alu -166 147 7 554 278 53 60 chr2 35338647 35338928 -217917655 - HERV16 LTR ERVL -2964 2032 1754 297 167 0 0 chr2 35338987 35339041 -217917542 + CT-rich Low_complexity Low_complexity 1 54 0 361 91 0 0 chr2 35339185 35339240 -217917343 - MLT2A1 LTR ERVL 0 453 399 206 82 33 49 chr2 35339252 35339313 -217917270 + (TTATA)n Simple_repeat Simple_repeat 5 64 0 2960 75 0 5 chr2 35339316 35339715 -217916868 - MLT2A1 LTR ERVL -47 397 1 1574 339 55 46 chr2 35339718 35341136 -217915447 - HERV16 LTR ERVL -3563 1433 3 815 264 94 37 chr2 35341138 35341573 -217915010 - LTR16B LTR ERVL 0 464 5 2261 79 0 4 chr2 35341647 35341960 -217914623 + AluY SINE Alu 5 316 0 273 189 0 40 chr2 35342203 35342277 -217914306 + MER103 DNA DNA 36 106 -60 189 0 0 0 chr2 35343726 35343747 -217912836 + (T)n Simple_repeat Simple_repeat 1 21 0 826 231 24 48 chr2 35344216 35344467 -217912116 - L1MC4 LINE L1 -1126 6916 6672 227 188 0 31 chr2 35344501 35344565 -217912018 + (CATATA)n Simple_repeat Simple_repeat 2 63 0 1965 140 0 7 chr2 35345299 35345629 -217910954 - AluSx SINE Alu 0 328 1 290 279 26 32 chr2 35346335 35346525 -217910058 - L2 LINE L2 -2656 658 470 2115 113 3 0 chr2 35347343 35347627 -217908956 + AluSq SINE Alu 1 285 -28 24 32 0 0 chr2 35347627 35347658 -217908925 + AT_rich Low_complexity Low_complexity 1 31 0 600 134 75 118 chr2 35348455 35348504 -217908079 - MER53 DNA DNA -9 180 130 483 115 13 0 chr2 35348504 35348556 -217908027 - MADE1 DNA Mariner 0 80 25 1923 95 18 22 chr2 35348556 35348830 -217907753 + AluSc SINE Alu 37 309 0 483 115 13 0 chr2 35348830 35348855 -217907728 - MADE1 DNA Mariner -55 25 2 600 134 75 118 chr2 35348855 35348991 -217907592 - MER53 DNA DNA -59 130 3 23 0 0 0 chr2 35349269 35349292 -217907291 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 35349388 35349416 -217907167 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr2 35349529 35349555 -217907028 + AT_rich Low_complexity Low_complexity 1 26 0 374 381 9 5 chr2 35349817 35350040 -217906543 + L1MC/D LINE L1 5514 5737 -2071 31 44 0 0 chr2 35350150 35350195 -217906388 + AT_rich Low_complexity Low_complexity 1 45 0 616 281 101 10 chr2 35351247 35351446 -217905137 - MIR SINE MIR 0 262 46 248 218 109 0 chr2 35352344 35352399 -217904184 - L2 LINE L2 -3 3310 3250 1989 188 71 18 chr2 35352435 35352887 -217903696 + MER67D LTR ERV1 11 486 -28 183 280 0 0 chr2 35353818 35353868 -217902715 - L2 LINE L2 -426 2887 2838 186 244 0 0 chr2 35353911 35353952 -217902631 - MIR SINE MIR -176 86 46 746 187 107 8 chr2 35354161 35354423 -217902160 - L1MA2 LINE L1 -49 6255 5968 10362 174 16 35 chr2 35354523 35355021 -217901562 - L1MA2 LINE L1 -194 7529 7023 2179 119 53 19 chr2 35355021 35355382 -217901201 + THE1C LTR MaLR 3 375 0 10362 174 16 35 chr2 35355382 35357770 -217898813 - L1MA2 LINE L1 -700 7023 4628 552 141 0 0 chr2 35357770 35357862 -217898721 - AluSp/q SINE Alu 0 313 222 10362 174 16 35 chr2 35357862 35358273 -217898310 - L1MA2 LINE L1 -3095 4628 4210 1910 122 56 88 chr2 35358273 35358649 -217897934 - THE1B LTR MaLR 0 364 1 420 116 0 0 chr2 35358649 35358718 -217897865 - THE1B-int LTR MaLR 0 1580 1512 * 1855 105 21 0 chr2 35358713 35358998 -217897585 - THE1B-int LTR MaLR -1289 291 1 1915 161 27 35 chr2 35358998 35359253 -217897330 - THE1B LTR MaLR 0 364 111 2264 127 0 0 chr2 35359253 35359561 -217897022 - AluSx SINE Alu -4 308 1 1915 161 27 35 chr2 35359561 35359672 -217896911 - THE1B LTR MaLR -253 111 1 14303 161 134 45 chr2 35359672 35360288 -217896295 - L1MA2 LINE L1 -3351 4214 3654 2096 126 7 0 chr2 35360288 35360590 -217895993 - AluSc SINE Alu -5 304 1 14303 161 134 45 chr2 35360590 35361654 -217894929 - L1MA2 LINE L1 -3911 3654 2686 264 89 0 0 chr2 35361654 35361699 -217894884 - Alu SINE Alu -2 306 262 14303 161 134 45 chr2 35361699 35362895 -217893688 - L1MA2 LINE L1 -4879 2686 1598 2591 123 0 3 chr2 35362895 35363260 -217893323 - THE1B LTR MaLR 0 364 1 14303 161 134 45 chr2 35363260 35363356 -217893227 - L1MA2 LINE L1 -5967 1598 1512 1608 172 55 33 chr2 35363356 35363723 -217892860 + THE1C LTR MaLR 1 375 0 9259 139 12 47 chr2 35363727 35365361 -217891222 + THE1C-int LTR MaLR 5 1580 0 1596 154 199 8 chr2 35365362 35365547 -217891036 + MSTA LTR MaLR 2 150 -278 204 40 0 0 chr2 35365547 35365572 -217891011 + (TC)n Simple_repeat Simple_repeat 2 26 0 1596 154 199 8 chr2 35365572 35365743 -217890840 + MSTA LTR MaLR 150 426 -2 14303 161 134 45 chr2 35365743 35366565 -217890018 - L1MA2 LINE L1 -6054 1511 16 217 364 34 11 chr2 35368077 35368165 -217888418 - L2 LINE L2 -21 3292 3203 405 39 0 0 chr2 35368253 35368304 -217888279 + (TG)n Simple_repeat Simple_repeat 2 52 0 28 0 0 0 chr2 35368333 35368361 -217888222 + AT_rich Low_complexity Low_complexity 1 28 0 1724 229 154 12 chr2 35368693 35369186 -217887397 + MLT1F1 LTR MaLR 3 565 -2 567 301 24 45 chr2 35369560 35369806 -217886777 - L3 LINE CR1 -109 1468 1228 220 339 179 9 chr2 35369971 35370083 -217886500 - MIR SINE MIR -75 187 57 21 57 0 0 chr2 35370460 35370495 -217886088 + AT_rich Low_complexity Low_complexity 1 35 0 222 261 57 89 chr2 35371015 35371127 -217885456 + MIR SINE MIR 36 143 -119 2204 125 31 3 chr2 35371127 35371478 -217885105 + MER46B DNA MER2_type 1 236 0 222 261 57 89 chr2 35371478 35371522 -217885061 + MIR SINE MIR 143 187 -75 22 0 0 0 chr2 35371692 35371714 -217884869 + AT_rich Low_complexity Low_complexity 1 22 0 29501 116 12 58 chr2 35371759 35377762 -217878821 + L1P3 LINE L1 12 5725 -429 867 204 0 0 chr2 35377862 35378024 -217878559 + MER58B DNA MER1_type 176 337 -4 233 119 24 0 chr2 35378637 35378679 -217877904 + (TA)n Simple_repeat Simple_repeat 2 44 0 249 83 0 0 chr2 35378826 35378862 -217877721 + (TC)n Simple_repeat Simple_repeat 1 36 0 229 311 42 8 chr2 35379228 35379347 -217877236 + L2 LINE L2 47 169 -3145 1001 269 231 43 chr2 35379354 35379722 -217876861 + L2 LINE L2 337 634 -2680 1778 134 22 51 chr2 35379722 35380036 -217876547 - AluSx SINE Alu -7 305 1 1001 269 231 43 chr2 35380036 35380321 -217876262 + L2 LINE L2 634 1113 -2201 510 17 0 0 chr2 35381086 35381145 -217875438 + (A)n Simple_repeat Simple_repeat 1 59 0 615 178 123 0 chr2 35381148 35381294 -217875289 + L1MC2 LINE L1 6155 6318 -26 1948 145 0 43 chr2 35381566 35381935 -217874648 - AluJb SINE Alu 0 355 1 708 160 112 12 chr2 35383439 35383608 -217872975 + MER53 DNA DNA 1 186 -3 2275 88 0 26 chr2 35383832 35384137 -217872446 + AluY SINE Alu 1 297 -14 183 129 0 0 chr2 35384220 35384251 -217872332 + (TG)n Simple_repeat Simple_repeat 1 31 0 422 244 102 44 chr2 35385113 35385318 -217871265 - L1ME3A LINE L1 0 6170 5954 747 248 141 1 chr2 35385328 35385616 -217870967 - L1ME3A LINE L1 -265 5905 5572 3811 146 102 28 chr2 35386422 35387812 -217868771 + pTR5 LTR ERV1 741 2606 0 21 0 0 0 chr2 35388587 35388608 -217867975 + AT_rich Low_complexity Low_complexity 1 21 0 909 289 59 20 chr2 35388670 35389026 -217867557 + MLT1A2 LTR MaLR 1 370 -4 1069 103 11 6 chr2 35389174 35389349 -217867234 + (TTTC)n Simple_repeat Simple_repeat 1 176 0 1833 171 0 0 chr2 35389349 35389629 -217866954 - AluSx SINE Alu -32 280 1 493 244 48 163 chr2 35389736 35390129 -217866454 - L2 LINE L2 -1 3312 2965 623 283 90 13 chr2 35390181 35390414 -217866169 + MLT1G LTR MaLR 73 323 -267 2279 105 3 0 chr2 35390450 35390755 -217865828 + AluY SINE Alu 5 310 -1 418 210 60 0 chr2 35390770 35390870 -217865713 + MLT1G LTR MaLR 485 590 0 3351 281 157 28 chr2 35390922 35392476 -217864107 - L2 LINE L2 -421 2893 1139 3422 51 14 2 chr2 35392579 35393012 -217863571 + L1PA7 LINE L1 5713 6150 -4 824 268 27 58 chr2 35393164 35393337 -217863246 - AluJo SINE Alu -15 287 125 2300 109 0 0 chr2 35393337 35393639 -217862944 - AluSg1 SINE Alu -7 302 1 824 268 27 58 chr2 35393639 35393760 -217862823 - AluJo SINE Alu -177 125 2 357 259 88 41 chr2 35394139 35394309 -217862274 - MIR SINE MIR -1 261 84 26 0 0 0 chr2 35394916 35394942 -217861641 + AT_rich Low_complexity Low_complexity 1 26 0 2219 98 14 7 chr2 35395289 35395586 -217860997 + AluSg SINE Alu 1 299 -11 2285 106 7 0 chr2 35396333 35396636 -217859947 + AluSx SINE Alu 1 305 -7 376 330 35 35 chr2 35397729 35397956 -217858627 + MLT1J LTR MaLR 235 461 -50 1508 173 67 4 chr2 35398994 35399367 -217857216 + L1MC2 LINE L1 5734 6170 -174 2405 93 3 0 chr2 35399368 35399701 -217856882 + AluSq SINE Alu 1 334 0 1351 330 160 23 chr2 35400944 35401378 -217855205 + L2 LINE L2 1444 1817 -1496 1902 150 17 0 chr2 35401378 35401671 -217854912 - AluSx SINE Alu -14 298 1 1351 330 160 23 chr2 35401671 35402861 -217853722 + L2 LINE L2 1817 3313 0 1857 147 13 10 chr2 35403201 35403507 -217853076 - AluSx SINE Alu -5 307 1 2368 91 0 0 chr2 35403585 35403882 -217852701 - AluSq SINE Alu -16 297 1 23 33 0 0 chr2 35403958 35403988 -217852595 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 35404564 35404585 -217851998 + AT_rich Low_complexity Low_complexity 1 21 0 633 258 41 21 chr2 35404851 35405045 -217851538 - MIR SINE MIR -7 255 58 22 0 0 0 chr2 35405284 35405306 -217851277 + AT_rich Low_complexity Low_complexity 1 22 0 3461 174 30 10 chr2 35405388 35406087 -217850496 + L1MA4A LINE L1 4081 4793 -1353 3294 141 12 18 chr2 35406076 35406785 -217849798 + L1MA4A LINE L1 5127 5832 -471 * 1654 25 0 5 chr2 35407452 35407672 -217848911 + L1PA3 LINE L1 5952 6170 0 37 62 0 0 chr2 35407679 35407744 -217848839 + AT_rich Low_complexity Low_complexity 1 65 0 330 289 67 30 chr2 35408205 35408340 -217848243 - MIR3 SINE MIR -7 201 62 351 0 0 0 chr2 35408969 35409008 -217847575 + (CA)n Simple_repeat Simple_repeat 2 40 0 833 142 27 0 chr2 35409061 35409209 -217847374 - AluJb SINE Alu -1 311 160 2045 132 7 0 chr2 35409679 35409974 -217846609 - AluSg SINE Alu -13 297 1 3516 86 68 0 chr2 35410309 35410821 -217845762 + L1PA13 LINE L1 5617 6163 0 228 305 57 19 chr2 35410868 35410973 -217845610 - MIR SINE MIR -46 216 108 320 304 48 60 chr2 35411791 35411959 -217844624 - MIR SINE MIR -50 212 47 16089 81 4 15 chr2 35411963 35414263 -217842320 + L1PA6 LINE L1 918 3191 -2955 5155 54 0 0 chr2 35414263 35414891 -217841692 + L1PA5 LINE L1 5526 6154 0 * 17155 56 5 1 chr2 35414888 35417857 -217838726 + L1PA6 LINE L1 3179 6143 -11 6344 188 8 9 chr2 35419882 35421976 -217834607 + L1PA15 LINE L1 4078 6156 -9 297 302 104 39 chr2 35423223 35423405 -217833178 - MIR SINE MIR -10 252 59 252 328 145 15 chr2 35423741 35423872 -217832711 + MIR SINE MIR 5 152 -110 2321 71 3 10 chr2 35423876 35424201 -217832382 + AluY SINE Alu 2 311 0 2068 169 8 16 chr2 35425568 35425936 -217830647 - MLT1A1 LTR MaLR 0 365 1 523 290 115 40 chr2 35426264 35427125 -217829458 + L1ME3A LINE L1 1450 2375 -4021 240 214 145 63 chr2 35427293 35427452 -217829131 + L1ME3A LINE L1 5386 5557 -682 433 307 68 19 chr2 35427648 35427957 -217828626 + L1ME3A LINE L1 5747 6070 -169 1044 55 0 0 chr2 35427957 35428085 -217828498 - L1PA6 LINE L1 -433 5721 5594 3419 58 0 0 chr2 35428085 35428513 -217828070 + L1PA6 LINE L1 5725 6152 -2 307 306 16 49 chr2 35428513 35428696 -217827887 + L1ME3A LINE L1 6059 6235 -4 228 297 45 72 chr2 35429003 35429114 -217827469 - L2 LINE L2 -2 3270 3163 357 326 80 29 chr2 35429943 35430182 -217826401 + MIR SINE MIR 3 253 -9 523 288 59 12 chr2 35431183 35431353 -217825230 + LTR33 LTR ERVL 4 181 -340 331 369 20 10 chr2 35431414 35431609 -217824974 + LTR33 LTR ERVL 304 500 -21 889 296 109 3 chr2 35432031 35432315 -217824268 + LTR16A LTR ERVL 135 448 -2 1875 229 127 22 chr2 35432425 35432962 -217823621 - MLT1E LTR MaLR 0 593 1 363 363 47 10 chr2 35434118 35434311 -217822272 - MIR SINE MIR -55 207 8 1971 102 4 4 chr2 35435229 35435493 -217821090 - AluSx SINE Alu -21 291 28 370 115 103 0 chr2 35435600 35435687 -217820896 - AluSq/x SINE Alu -197 106 11 22 0 0 0 chr2 35435817 35435839 -217820744 + AT_rich Low_complexity Low_complexity 1 22 0 184 315 0 90 chr2 35436018 35436107 -217820476 - L2 LINE L2 -3228 86 6 21 36 0 0 chr2 35437019 35437047 -217819536 + AT_rich Low_complexity Low_complexity 1 28 0 234 0 0 0 chr2 35438325 35438351 -217818232 + (TA)n Simple_repeat Simple_repeat 2 27 0 1746 88 0 0 chr2 35438351 35438566 -217818017 - AluSg/x SINE Alu -12 298 84 2183 117 3 3 chr2 35439748 35440048 -217816535 + AluSg SINE Alu 1 300 -10 22 35 0 0 chr2 35440135 35440164 -217816419 + AT_rich Low_complexity Low_complexity 1 29 0 350 220 89 77 chr2 35440592 35440741 -217815842 - MIR3 SINE MIR -52 156 37 193 194 65 65 chr2 35440999 35441061 -217815522 + MIR3 SINE MIR 140 201 -7 184 378 14 0 chr2 35443406 35443480 -217813103 + L2 LINE L2 335 409 -2905 2332 90 7 0 chr2 35443693 35443992 -217812591 - AluSc SINE Alu -8 301 1 215 352 46 9 chr2 35444020 35444128 -217812455 + MIR SINE MIR 126 237 -25 435 332 60 30 chr2 35444205 35444437 -217812146 + MIR SINE MIR 12 250 -12 215 200 0 0 chr2 35444784 35444819 -217811764 + (TG)n Simple_repeat Simple_repeat 2 36 0 7456 190 40 11 chr2 35444819 35447751 -217808832 - L1 LINE L1 -1922 4926 1907 8339 108 12 4 chr2 35447752 35449779 -217806804 - L1PA8 LINE L1 -2 6485 4418 8523 185 31 25 chr2 35449779 35452840 -217803743 - L1PA8 LINE L1 -3312 3149 10 8159 201 27 50 chr2 35452863 35452965 -217803618 - L1 LINE L1 -4946 1903 1800 2290 126 8 21 chr2 35452965 35453345 -217803238 + THE1C LTR MaLR 1 375 0 8159 201 27 50 chr2 35453345 35455189 -217801394 - L1 LINE L1 -5049 1800 1 390 218 58 65 chr2 35455200 35455508 -217801075 - L1M4 LINE L1 -2812 3334 3029 225 0 0 0 chr2 35457000 35457025 -217799558 + (TC)n Simple_repeat Simple_repeat 2 26 0 234 220 0 17 chr2 35457088 35457147 -217799436 + (TA)n Simple_repeat Simple_repeat 1 58 0 387 0 0 0 chr2 35457147 35457190 -217799393 + (TG)n Simple_repeat Simple_repeat 2 44 0 571 61 74 12 chr2 35457205 35457368 -217799215 + (TA)n Simple_repeat Simple_repeat 2 174 0 181 0 69 0 chr2 35457925 35457954 -217798629 + (TA)n Simple_repeat Simple_repeat 2 32 0 516 36 95 30 chr2 35457968 35458136 -217798447 + (TA)n Simple_repeat Simple_repeat 1 179 0 284 51 68 0 chr2 35458173 35458232 -217798351 + (TA)n Simple_repeat Simple_repeat 1 63 0 25 0 0 0 chr2 35458302 35458327 -217798256 + AT_rich Low_complexity Low_complexity 1 25 0 2346 105 0 0 chr2 35459450 35459754 -217796829 + AluSx SINE Alu 1 304 -8 1693 205 58 3 chr2 35460279 35460625 -217795958 - MLT1A1 LTR MaLR 0 365 1 15946 44 4 2 chr2 35460959 35463722 -217792861 - L1PA4 LINE L1 -4 6151 3387 7374 36 1 1 chr2 35463718 35465385 -217791198 - L1PA3 LINE L1 0 6155 4491 * 24739 66 3 1 chr2 35465388 35468770 -217787813 - L1PA4 LINE L1 -2754 3392 2 283 366 18 0 chr2 35469273 35469385 -217787198 - L2 LINE L2 -8 3264 3151 339 252 65 65 chr2 35469430 35469585 -217786998 - MIR SINE MIR -48 214 60 4008 34 21 0 chr2 35472022 35472553 -217784030 - L1P LINE L1 -762 5384 4843 687 86 0 35 chr2 35472550 35472666 -217783917 + L1P LINE L1 4773 4884 -1262 * 386 210 0 0 chr2 35473126 35473207 -217783376 - MER96 DNA MER1_type? -90 85 5 578 282 88 35 chr2 35473593 35473877 -217782706 + L2 LINE L2 2999 3297 -16 793 182 35 104 chr2 35474038 35474269 -217782314 + MER20 DNA MER1_type 5 219 0 277 294 54 11 chr2 35474269 35474361 -217782222 - MER5A DNA MER1_type -74 115 20 222 62 0 0 chr2 35475609 35475641 -217780942 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 1182 249 52 23 chr2 35475762 35476111 -217780472 - LTR16A LTR ERVL -5 445 87 466 200 222 0 chr2 35477119 35477254 -217779329 + MLT1D LTR MaLR 281 445 -60 5438 161 14 2 chr2 35477516 35478405 -217778178 - MER54A LTR ERVL 0 901 3 2469 69 3 0 chr2 35478498 35478801 -217777782 + AluY SINE Alu 2 305 -6 218 329 141 12 chr2 35479179 35479264 -217777319 - MIR SINE MIR -97 111 16 402 206 20 10 chr2 35479290 35479392 -217777191 + MER94 DNA DNA 1 103 -31 23 0 0 0 chr2 35479844 35479867 -217776716 + AT_rich Low_complexity Low_complexity 1 23 0 24134 23 0 0 chr2 35479868 35482859 -217773724 - L1HS LINE L1 -968 5178 2188 7697 4 1 0 chr2 35482856 35483821 -217772762 + L1HS LINE L1 5190 6155 0 * 952 248 87 13 chr2 35484187 35484578 -217772005 + MER110A LTR ERV1 49 468 0 520 233 195 19 chr2 35484620 35484779 -217771804 - MIR SINE MIR -50 212 26 279 346 109 0 chr2 35485308 35485510 -217771073 + L3 LINE CR1 630 853 -724 274 360 35 9 chr2 35485520 35485634 -217770949 + L3 LINE CR1 1379 1495 -82 28 61 0 0 chr2 35486548 35486597 -217769986 + AT_rich Low_complexity Low_complexity 1 49 0 1404 233 32 12 chr2 35486671 35487071 -217769512 - L1ME1 LINE L1 -167 5999 5592 6004 111 20 47 chr2 35487097 35488333 -217768250 + L1MA3 LINE L1 5101 6305 0 824 243 94 4 chr2 35488389 35488656 -217767927 - L1ME1 LINE L1 -611 5555 5265 3042 269 26 24 chr2 35488713 35489993 -217766590 - L1ME1 LINE L1 -890 5256 3975 5757 142 10 14 chr2 35490012 35490688 -217765895 + L1PB3 LINE L1 4910 5580 -574 2096 127 7 0 chr2 35490688 35490995 -217765588 - AluSg SINE Alu -1 309 1 5757 142 10 14 chr2 35490995 35491552 -217765031 + L1PB3 LINE L1 5580 6138 -16 278 170 0 0 chr2 35491578 35491625 -217764958 - L1ME1 LINE L1 -2157 3989 3943 394 298 107 29 chr2 35492948 35493190 -217763393 + MIR SINE MIR 1 261 -1 2257 76 7 26 chr2 35493567 35493870 -217762713 + AluSx SINE Alu 5 301 -11 274 358 193 21 chr2 35493938 35494648 -217761935 + L2 LINE L2 860 1446 -1868 2259 89 0 13 chr2 35494648 35494951 -217761632 + AluY SINE Alu 1 299 -12 274 358 193 21 chr2 35494951 35495331 -217761252 + L2 LINE L2 1446 2138 -1176 447 281 127 70 chr2 35495331 35495893 -217760690 + L2 LINE L2 2710 3305 -8 232 269 138 35 chr2 35495975 35496120 -217760463 - MIR SINE MIR -46 216 57 4213 226 62 46 chr2 35496144 35497135 -217759448 - L1MB7 LINE L1 -15 6169 5195 1534 186 6 40 chr2 35497135 35497458 -217759125 - AluJo SINE Alu 0 312 1 4213 226 62 46 chr2 35497458 35498256 -217758327 - L1MB7 LINE L1 -989 5195 4344 1690 188 14 0 chr2 35498256 35498544 -217758039 - AluJo SINE Alu -20 292 1 4213 226 62 46 chr2 35498544 35499065 -217757518 - L1MB7 LINE L1 -1840 4344 3833 209 382 0 0 chr2 35500242 35500310 -217756273 - L2 LINE L2 -3 3269 3202 2021 138 0 10 chr2 35500407 35500705 -217755878 + AluSx SINE Alu 1 295 -17 355 257 76 0 chr2 35500836 35500941 -217755642 + MIR3 SINE MIR 85 197 -11 3387 15 10 2 chr2 35501634 35502034 -217754549 - L1PA2 LINE L1 -487 5668 5266 4339 16 0 0 chr2 35502034 35502523 -217754060 + L1PA2 LINE L1 5657 6154 -1 23 0 0 0 chr2 35504828 35504851 -217751732 + AT_rich Low_complexity Low_complexity 1 23 0 300 346 19 26 chr2 35504998 35505154 -217751429 - MIR SINE MIR -36 226 72 366 231 43 9 chr2 35505163 35505275 -217751308 - MLT1I LTR MaLR 0 416 311 631 273 52 30 chr2 35505804 35506071 -217750512 - L1ME LINE L1 -327 5794 5522 1928 142 7 0 chr2 35506132 35506413 -217750170 - AluSx SINE Alu -25 287 5 2208 66 35 3 chr2 35508380 35508669 -217747914 + AluY SINE Alu 1 298 -13 418 306 111 78 chr2 35508858 35509319 -217747264 - L2 LINE L2 0 3313 2838 2157 106 3 0 chr2 35510037 35510330 -217746253 + AluSx SINE Alu 1 294 -18 1040 126 88 0 chr2 35510416 35510575 -217746008 + AluSx SINE Alu 1 173 -139 401 244 0 0 chr2 35511241 35511331 -217745252 + MER66B LTR ERV1 2 91 -395 241 345 94 60 chr2 35511457 35511500 -217745083 - L2 LINE L2 -1002 2312 2272 2269 178 54 13 chr2 35511500 35511966 -217744617 + MER66B LTR ERV1 2 486 0 241 345 94 60 chr2 35511966 35512359 -217744224 - L2 LINE L2 -1042 2272 1861 417 281 0 23 chr2 35512818 35512946 -217743637 - MER117 DNA MER1_type -40 157 33 204 314 119 62 chr2 35513032 35513258 -217743325 - L2 LINE L2 -2099 1215 977 846 209 63 19 chr2 35513351 35513392 -217743191 + MER34 LTR ERV1 325 363 -179 2269 99 7 0 chr2 35513392 35513696 -217742887 + AluSc SINE Alu 1 306 -3 846 209 63 19 chr2 35513696 35513860 -217742723 + MER34 LTR ERV1 363 539 -3 599 221 14 29 chr2 35514083 35514223 -217742360 - AluJo SINE Alu -173 139 2 2820 111 9 11 chr2 35514593 35515026 -217741557 - L1MA2 LINE L1 -26 6278 5847 6840 189 10 18 chr2 35515027 35516428 -217740155 - L1 LINE L1 -1730 5835 4444 2008 129 93 12 chr2 35516428 35516760 -217739823 - THE1B LTR MaLR -1 363 5 6840 189 10 18 chr2 35516760 35516832 -217739751 - L1 LINE L1 -3121 4444 4373 * 8523 147 29 31 chr2 35516827 35517655 -217738928 - L1 LINE L1 -4256 3309 2485 2334 80 6 6 chr2 35517655 35517966 -217738617 - AluY SINE Alu 0 311 1 8523 147 29 31 chr2 35517966 35518742 -217737841 - L1 LINE L1 -5080 2485 1709 549 254 107 36 chr2 35518905 35519157 -217737426 - MER76 LTR ERV -137 551 282 1008 237 11 18 chr2 35519157 35519435 -217737148 + L1M4 LINE L1 3418 3693 -2453 848 324 69 53 chr2 35519440 35520038 -217736545 - L2 LINE L2 -537 2777 2171 606 252 202 32 chr2 35520300 35520677 -217735906 + L1ME4a LINE L1 5629 6069 -52 3657 103 12 2 chr2 35521859 35522374 -217734209 + L1PA13 LINE L1 5623 6142 -21 183 74 0 0 chr2 35522516 35522523 -217734060 + (TAA)n Simple_repeat Simple_repeat 2 8 -20 2346 73 0 0 chr2 35522523 35522809 -217733774 + AluY SINE Alu 1 286 -25 183 74 0 0 chr2 35522809 35522828 -217733755 + (TAA)n Simple_repeat Simple_repeat 7 28 0 307 340 20 15 chr2 35522906 35523103 -217733480 + HAL1b LINE L1 256 453 -895 449 108 96 0 chr2 35523141 35523224 -217733359 + L1PA12 LINE L1 6078 6168 0 356 292 29 22 chr2 35523371 35523508 -217733075 + L1MC4 LINE L1 7356 7493 -549 207 0 0 0 chr2 35523978 35524001 -217732582 + (TA)n Simple_repeat Simple_repeat 1 23 0 414 319 176 9 chr2 35527145 35527361 -217729222 - MIR SINE MIR 0 262 11 189 352 0 0 chr2 35527999 35528053 -217728530 - MIR SINE MIR -2 260 207 1645 263 49 30 chr2 35528169 35528678 -217727905 + LTR40a LTR ERVL 1 519 0 1388 193 57 33 chr2 35528919 35529264 -217727319 + MLT1A1 LTR MaLR 1 352 -13 462 337 49 0 chr2 35530551 35530714 -217725869 - MER117 DNA MER1_type -2 195 25 235 374 45 32 chr2 35530907 35531062 -217725521 - MIR3 SINE MIR -4 204 48 469 255 57 13 chr2 35531225 35531382 -217725201 + MIR SINE MIR 98 261 -1 2090 124 3 0 chr2 35531424 35531715 -217724868 + AluSx SINE Alu 1 292 -20 456 330 87 54 chr2 35531989 35532322 -217724261 + L1M4 LINE L1 3798 4141 -2005 308 311 107 0 chr2 35532442 35532564 -217724019 + L1M4 LINE L1 4129 4263 -1883 1437 215 18 0 chr2 35532905 35533235 -217723348 + L1MB7 LINE L1 5836 6171 -13 23 0 0 0 chr2 35533327 35533350 -217723233 + AT_rich Low_complexity Low_complexity 1 23 0 282 319 80 0 chr2 35534204 35534317 -217722266 + MLT1G1 LTR MaLR 1 122 -473 386 321 14 29 chr2 35534443 35534583 -217722000 + MLT1G1 LTR MaLR 182 319 -276 502 248 29 15 chr2 35534587 35534724 -217721859 + MLT1G1 LTR MaLR 450 588 -7 2110 124 0 0 chr2 35534806 35535097 -217721486 - AluY SINE Alu -20 291 1 241 220 20 0 chr2 35535219 35535269 -217721314 + L1MA8 LINE L1 460 510 -6979 274 161 18 0 chr2 35535313 35535369 -217721214 + L1MA8 LINE L1 2579 2635 -4930 7544 171 34 20 chr2 35535382 35538045 -217718538 + L1MA8 LINE L1 4940 7688 -22 327 268 62 21 chr2 35538872 35538969 -217717614 - MIR SINE MIR -156 106 6 415 191 0 19 chr2 35541296 35541401 -217715182 + (TG)n Simple_repeat Simple_repeat 2 104 0 495 228 45 119 chr2 35541736 35542004 -217714579 + MER112 DNA MER1_type 1 248 -12 43328 45 2 4 chr2 35542610 35548771 -217707812 + L1PA4 LINE L1 1 6152 -3 27 62 0 0 chr2 35548771 35548819 -217707764 + AT_rich Low_complexity Low_complexity 1 48 0 952 90 0 0 chr2 35548928 35549050 -217707533 + AluSc SINE Alu 156 277 -32 207 0 0 0 chr2 35549050 35549073 -217707510 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 207 0 0 0 chr2 35549072 35549095 -217707488 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2414 68 7 7 chr2 35552159 35552466 -217704117 - AluY SINE Alu 0 311 5 5454 164 11 1 chr2 35552882 35553772 -217702811 - MER54A LTR ERVL 0 901 3 2204 100 0 7 chr2 35553865 35554156 -217702427 + AluSc SINE Alu 2 290 -19 667 152 0 0 chr2 35554193 35554298 -217702285 - MLT1A1 LTR MaLR -1 364 260 * 1707 199 44 0 chr2 35554292 35554613 -217701970 - MLT1A1 LTR MaLR -30 335 1 328 216 20 0 chr2 35554828 35554930 -217701653 + (TA)n Simple_repeat Simple_repeat 1 104 0 1437 191 43 28 chr2 35554930 35555212 -217701371 - AluJo SINE Alu -26 286 1 192 319 83 14 chr2 35555212 35555356 -217701227 - MIR SINE MIR -60 202 49 201 135 54 0 chr2 35555660 35555697 -217700886 + A-rich Low_complexity Low_complexity 3 41 0 374 69 17 0 chr2 35555698 35555756 -217700827 + (CA)n Simple_repeat Simple_repeat 2 60 0 223 254 51 0 chr2 35556872 35556931 -217699652 - MIR SINE MIR -83 179 118 326 283 75 53 chr2 35557031 35557218 -217699365 - HAL1 LINE L1 -13 2494 2304 251 246 16 0 chr2 35557671 35557732 -217698851 + L1MC/D LINE L1 5690 5751 -2057 22 56 0 0 chr2 35558468 35558504 -217698079 + AT_rich Low_complexity Low_complexity 1 36 0 1751 147 0 14 chr2 35559685 35559964 -217696619 - AluSg SINE Alu -3 307 33 336 253 0 0 chr2 35560123 35560206 -217696377 + L1M4 LINE L1 4791 4873 -1273 2090 111 7 3 chr2 35561557 35561846 -217694737 + AluSg SINE Alu 1 290 -20 472 33 0 0 chr2 35561865 35561926 -217694657 - L1P LINE L1 -3042 3104 3044 15475 51 24 0 chr2 35561926 35564636 -217691947 + L1PA5 LINE L1 3419 6154 0 192 333 61 26 chr2 35565854 35565968 -217690615 + MIR3 SINE MIR 85 202 -6 413 49 0 16 chr2 35566111 35566172 -217690411 + (TA)n Simple_repeat Simple_repeat 2 61 0 225 250 73 29 chr2 35566970 35567038 -217689545 + L2 LINE L2 3200 3270 -2 196 161 0 0 chr2 35567125 35567156 -217689427 - MIR SINE MIR -60 148 118 357 279 55 50 chr2 35567459 35567678 -217688905 - L1ME4a LINE L1 -135 5986 5767 310 148 0 0 chr2 35567966 35568020 -217688563 - L1ME4a LINE L1 -657 5517 5464 1684 135 77 40 chr2 35568464 35568789 -217687794 - MER1B DNA MER1_type 0 337 1 27 29 0 0 chr2 35569065 35569099 -217687484 + AT_rich Low_complexity Low_complexity 1 34 0 223 366 122 23 chr2 35571005 35571226 -217685357 + MIR SINE MIR 20 262 0 1127 224 82 23 chr2 35571356 35571660 -217684923 + MLT1B LTR MaLR 3 324 -66 429 302 47 51 chr2 35572165 35572380 -217684203 + MIR SINE MIR 28 241 -21 480 296 172 0 chr2 35573147 35573316 -217683267 - MIR SINE MIR -57 205 8 211 224 0 20 chr2 35573772 35573821 -217682762 + (CATA)n Simple_repeat Simple_repeat 2 49 0 423 222 16 95 chr2 35574252 35574378 -217682205 + MIR SINE MIR 90 205 -57 200 271 42 0 chr2 35574381 35574477 -217682106 + (TA)n Simple_repeat Simple_repeat 2 101 0 21 0 0 0 chr2 35574718 35574739 -217681844 + AT_rich Low_complexity Low_complexity 1 21 0 1556 216 29 20 chr2 35574939 35575290 -217681293 + MLT1A1 LTR MaLR 12 365 0 432 333 29 34 chr2 35576181 35576385 -217680198 + MIR SINE MIR 41 243 -19 258 296 14 99 chr2 35576980 35577122 -217679461 + Charlie8 DNA MER1_type 4 133 -2284 944 204 8 122 chr2 35577167 35577519 -217679064 + L1MD2 LINE L1 6035 6346 -13 292 238 119 12 chr2 35577532 35577616 -217678967 + Charlie8 DNA MER1_type 145 237 -2180 232 289 12 12 chr2 35577616 35577699 -217678884 + GA-rich Low_complexity Low_complexity 2 84 0 387 239 14 14 chr2 35577721 35577863 -217678720 + (TA)n Simple_repeat Simple_repeat 2 143 0 300 250 56 19 chr2 35578015 35578175 -217678408 + L1M4 LINE L1 3598 3763 -3802 8088 210 25 34 chr2 35578288 35579767 -217676816 + L1MA3 LINE L1 16 1837 -5728 2657 90 20 0 chr2 35579767 35580124 -217676459 - THE1B LTR MaLR 0 364 1 8088 210 25 34 chr2 35580124 35581128 -217675455 + L1MA3 LINE L1 1837 2849 -4716 * 10639 166 44 64 chr2 35581122 35581918 -217674665 + L1MA3 LINE L1 4021 4832 -2892 1374 156 148 11 chr2 35581918 35582181 -217674402 + AluSx SINE Alu 2 300 -2 1134 138 0 33 chr2 35582183 35582364 -217674219 + AluSg/x SINE Alu 121 295 -17 10639 166 44 64 chr2 35582364 35583989 -217672594 + L1MA3 LINE L1 4833 6520 -1204 2319 90 16 16 chr2 35583989 35584300 -217672283 - AluSq SINE Alu -2 311 1 10639 166 44 64 chr2 35584300 35585481 -217671102 + L1MA3 LINE L1 6520 7724 0 231 319 33 9 chr2 35585499 35585709 -217670874 + L1M4 LINE L1 3894 4108 -3457 3727 57 43 0 chr2 35585725 35586195 -217670388 + LTR2B LTR ERV1 1 490 0 2712 98 5 0 chr2 35586195 35586573 -217670010 + Harlequin LTR ERV1 1 380 -6516 733 83 0 0 chr2 35586568 35586664 -217669919 + Harlequin LTR ERV1 262 357 -6539 * 427 343 57 23 chr2 35586836 35587136 -217669447 + L1M4 LINE L1 5918 6227 -1338 433 230 80 16 chr2 35587330 35587517 -217669066 + L1ME3 LINE L1 5713 5911 -251 1179 139 20 68 chr2 35587962 35588158 -217668425 - L1MA1 LINE L1 -61 6241 6058 2366 86 0 16 chr2 35588158 35588473 -217668110 - AluY SINE Alu -1 310 1 1179 139 20 68 chr2 35588473 35588527 -217668056 - L1MA1 LINE L1 -244 6058 6003 21 36 0 0 chr2 35588622 35588650 -217667933 + AT_rich Low_complexity Low_complexity 1 28 0 504 348 118 10 chr2 35589311 35589607 -217666976 - L3 LINE CR1 -11 1566 1239 2105 99 7 7 chr2 35590579 35590862 -217665721 + AluSq SINE Alu 1 283 -30 913 9 0 0 chr2 35590863 35590969 -217665614 + L1PA2 LINE L1 6050 6155 0 255 93 0 0 chr2 35591004 35591047 -217665536 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 400 290 71 47 chr2 35591361 35591785 -217664798 + HAL1 LINE L1 1070 1503 -1004 1163 173 53 4 chr2 35593371 35593596 -217662987 - MER46A DNA MER2_type 0 236 1 2454 184 64 2 chr2 35594452 35594937 -217661646 - MLT2B2 LTR ERVL 0 515 1 2424 74 3 6 chr2 35595557 35595869 -217660714 + AluY SINE Alu 1 311 0 392 197 0 0 chr2 35596114 35596185 -217660398 - MER58 DNA MER1_type -16 2404 129 207 0 0 0 chr2 35596189 35596212 -217660371 + (A)n Simple_repeat Simple_repeat 1 23 0 618 227 108 82 chr2 35596273 35596722 -217659861 + MER110A LTR ERV1 26 466 -2 22 0 0 0 chr2 35596875 35596897 -217659686 + AT_rich Low_complexity Low_complexity 1 22 0 231 36 0 0 chr2 35598039 35598067 -217658516 + (CA)n Simple_repeat Simple_repeat 1 28 0 653 238 63 78 chr2 35598877 35599295 -217657288 + L1ME1 LINE L1 5730 6122 -44 180 0 0 0 chr2 35599245 35599265 -217657318 + (TA)n Simple_repeat Simple_repeat 1 20 0 271 233 63 75 chr2 35599265 35599343 -217657240 + L1MA10 LINE L1 6248 6325 -9 2420 169 17 0 chr2 35599376 35599795 -217656788 - MSTC LTR MaLR -2 426 1 26 50 0 0 chr2 35600052 35600092 -217656491 + AT_rich Low_complexity Low_complexity 1 40 0 216 274 0 0 chr2 35600107 35600158 -217656425 + GA-rich Low_complexity Low_complexity 2 52 0 2092 178 18 5 chr2 35600187 35600581 -217656002 - L1PA16 LINE L1 -9 6157 5759 2875 112 12 30 chr2 35600584 35600776 -217655807 + L1P4 LINE L1 5275 5469 -697 2244 101 0 16 chr2 35600776 35601092 -217655491 - AluSx SINE Alu -1 311 1 2875 112 12 30 chr2 35601092 35601392 -217655191 + L1P4 LINE L1 5469 5758 -408 665 126 11 153 chr2 35601400 35601590 -217654993 - AluY SINE Alu -13 298 136 374 205 13 109 chr2 35602288 35602444 -217654139 - L1MA9 LINE L1 -8 6290 6143 2009 90 6 6 chr2 35603169 35603498 -217653085 + LTR7 LTR ERV1 25 442 -8 11101 120 16 23 chr2 35603534 35605488 -217651095 + HERVH LTR ERV1 460 2618 -5095 7321 96 21 6 chr2 35605488 35606630 -217649953 - HERVH LTR ERV1 -4 7709 6551 4073 90 2 0 chr2 35606619 35607230 -217649353 - HERVH LTR ERV1 -1333 6380 5769 * 1251 100 0 0 chr2 35607226 35607406 -217649177 - HERVH LTR ERV1 -3046 4667 4488 * 3125 119 0 6 chr2 35607408 35607913 -217648670 - HERVH LTR ERV1 -3720 3993 3492 810 131 41 0 chr2 35607903 35608048 -217648535 - HERVH LTR ERV1 -4423 3290 3140 * 6426 113 12 12 chr2 35608042 35609088 -217647495 - HERVH LTR ERV1 -4726 2987 1942 2976 131 2 2 chr2 35609090 35609564 -217647019 - HERVH LTR ERV1 -7239 474 1 2566 107 92 7 chr2 35609566 35609979 -217646604 - LTR7 LTR ERV1 -2 448 1 2307 110 0 18 chr2 35609979 35610360 -217646223 + HERVH LTR ERV1 2614 2987 -4726 859 135 7 0 chr2 35610354 35610502 -217646081 + HERVH LTR ERV1 3140 3288 -4425 * 3226 111 0 6 chr2 35610494 35610999 -217645584 + HERVH LTR ERV1 3492 3993 -3720 1330 72 0 0 chr2 35611001 35611182 -217645401 + HERVH LTR ERV1 4488 4668 -3045 1714 73 11 4 chr2 35611183 35611443 -217645140 + LTR7 LTR ERV1 187 448 -2 2332 48 0 61 chr2 35613195 35613505 -217643078 - AluY SINE Alu -20 291 1 23 54 0 0 chr2 35613608 35613645 -217642938 + AT_rich Low_complexity Low_complexity 1 37 0 376 174 22 11 chr2 35614133 35614225 -217642358 + CT-rich Low_complexity Low_complexity 4 96 0 764 230 31 0 chr2 35614689 35614850 -217641733 + MER45A DNA AcHobo 1 166 -12 1594 202 3 18 chr2 35615672 35616004 -217640579 + MLT1A1 LTR MaLR 34 360 -5 303 263 13 0 chr2 35616251 35616327 -217640256 - L3 LINE CR1 -163 1414 1338 2349 119 13 24 chr2 35616735 35617113 -217639470 + THE1C LTR MaLR 2 375 0 199 325 61 26 chr2 35617130 35617244 -217639339 - L3 LINE CR1 -453 1124 1007 240 314 47 0 chr2 35617414 35617500 -217639083 - L3 LINE CR1 -823 754 665 201 263 0 0 chr2 35618213 35618270 -217638313 + (TA)n Simple_repeat Simple_repeat 2 58 0 1937 147 40 28 chr2 35618270 35618624 -217637959 + THE1B LTR MaLR 2 359 -5 335 181 14 0 chr2 35618628 35618700 -217637883 + (TA)n Simple_repeat Simple_repeat 1 73 0 225 234 0 0 chr2 35618939 35618986 -217637597 - MER69 DNA AcHobo -3 2523 2477 437 327 77 13 chr2 35619457 35619757 -217636826 + L1MEd LINE L1 857 1175 -4944 248 281 63 54 chr2 35619776 35619997 -217636586 - L1M4 LINE L1 -2049 4097 3875 354 321 78 64 chr2 35620037 35620445 -217636138 - L1M4 LINE L1 -2368 3778 3365 186 227 0 0 chr2 35620524 35620568 -217636015 + (TATATG)n Simple_repeat Simple_repeat 3 46 0 215 324 67 109 chr2 35620851 35621089 -217635494 + L2 LINE L2 3031 3258 -14 2481 70 0 6 chr2 35621189 35621502 -217635081 + AluY SINE Alu 1 311 0 1385 230 45 41 chr2 35622902 35623345 -217633238 + MER31B LTR ERV1 1 445 -21 5091 107 10 5 chr2 35623376 35624168 -217632415 - L1PB1 LINE L1 0 6151 5356 * 9755 198 32 13 chr2 35624157 35628115 -217628468 - L1PBa LINE L1 -1588 5274 1093 2654 239 86 16 chr2 35628118 35629091 -217627492 - L1PBa LINE L1 -5817 1046 6 387 0 0 0 chr2 35629098 35629141 -217627442 + (TA)n Simple_repeat Simple_repeat 1 43 0 1302 202 174 3 chr2 35629563 35629914 -217626669 - LTR45B LTR ERV1 -76 413 3 1724 184 54 20 chr2 35630028 35630435 -217626148 - L1MA8 LINE L1 -2 6289 5869 1698 128 3 96 chr2 35631092 35631479 -217625104 + AluJo SINE Alu 1 355 0 874 249 10 5 chr2 35632130 35632339 -217624244 - MER58A DNA MER1_type -5 219 10 1905 128 64 19 chr2 35633305 35633664 -217622919 + THE1C LTR MaLR 1 375 0 2243 68 10 24 chr2 35634197 35634491 -217622092 - AluY SINE Alu -21 290 1 557 283 43 17 chr2 35636124 35636657 -217619926 + L1M4c LINE L1 2025 2576 -3806 361 285 42 12 chr2 35636691 35636856 -217619727 + L1M4c LINE L1 3171 3340 -3042 601 200 0 73 chr2 35636914 35637064 -217619519 - Ricksha DNA DNA -2350 896 758 1460 303 98 22 chr2 35637494 35638306 -217618277 + L2 LINE L2 2424 3300 -13 260 318 9 19 chr2 35638337 35638444 -217618139 - MIR SINE MIR -56 206 101 2268 64 10 7 chr2 35639421 35639717 -217616866 + AluY SINE Alu 1 297 -14 229 329 0 0 chr2 35639750 35639826 -217616757 + (TATATG)n Simple_repeat Simple_repeat 2 77 0 396 270 163 20 chr2 35640032 35640228 -217616355 - MLT1J2 LTR MaLR -212 238 15 5369 73 46 27 chr2 35641028 35641794 -217614789 - LTR17 LTR ERV1 0 780 1 321 89 0 0 chr2 35641891 35641936 -217614647 + (TCCC)n Simple_repeat Simple_repeat 4 48 0 959 158 84 65 chr2 35642487 35642702 -217613881 - MER20 DNA MER1_type 0 219 1 387 227 117 13 chr2 35644715 35644869 -217611714 - L1ME3A LINE L1 -27 6143 5974 1242 167 193 36 chr2 35645378 35645767 -217610816 + LTR7 LTR ERV1 1 450 0 1756 209 113 20 chr2 35646419 35646863 -217609720 + MER67D LTR ERV1 29 513 -1 320 192 33 60 chr2 35647037 35647168 -217609415 - LTR41 LTR ERVL -1 794 660 770 222 0 66 chr2 35647407 35647605 -217608978 - LTR41 LTR ERVL -581 192 8 347 358 81 32 chr2 35647607 35647966 -217608617 - ERVL LTR ERVL -1461 4303 3910 2150 108 7 7 chr2 35647966 35648262 -217608321 - AluSc SINE Alu -13 296 1 347 358 81 32 chr2 35648262 35648408 -217608175 - ERVL LTR ERVL -1854 3910 3773 272 366 18 0 chr2 35648502 35648614 -217607969 - ERVL LTR ERVL -2040 3614 3501 325 311 42 34 chr2 35648874 35648993 -217607590 + L2 LINE L2 3194 3313 0 227 215 15 0 chr2 35649134 35649199 -217607384 + GA-rich Low_complexity Low_complexity 3 68 0 401 117 55 0 chr2 35650489 35650617 -217605966 + (TA)n Simple_repeat Simple_repeat 2 136 0 303 277 35 21 chr2 35650965 35651106 -217605477 + (TATG)n Simple_repeat Simple_repeat 2 144 0 22 56 0 0 chr2 35651622 35651658 -217604925 + AT_rich Low_complexity Low_complexity 1 36 0 470 244 64 39 chr2 35652056 35652212 -217604371 + MIR SINE MIR 91 250 -12 247 227 163 35 chr2 35653280 35653421 -217603162 + MIR SINE MIR 104 262 0 22 0 0 0 chr2 35654387 35654409 -217602174 + AT_rich Low_complexity Low_complexity 1 22 0 5111 150 50 4 chr2 35655972 35657128 -217599455 + L1PA15 LINE L1 4963 6165 0 1399 201 61 0 chr2 35657332 35657494 -217599089 - AluJo SINE Alu -16 296 108 186 43 0 0 chr2 35657494 35657517 -217599066 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1399 201 61 0 chr2 35657517 35657633 -217598950 - AluJo SINE Alu -204 108 1 479 171 45 0 chr2 35657815 35657903 -217598680 - AluJ/FLAM SINE Alu -212 100 9 7601 27 1 0 chr2 35657903 35659200 -217597383 + L1PA4 LINE L1 4855 6152 -3 247 313 17 9 chr2 35659201 35659316 -217597267 + L1 LINE L1 3576 3691 -2455 2204 127 0 0 chr2 35659431 35659739 -217596844 - AluSp SINE Alu -5 308 1 284 303 173 14 chr2 35659922 35660130 -217596453 + L1 LINE L1 3951 4191 -1955 914 231 42 73 chr2 35660424 35660710 -217595873 + LTR40a LTR ERVL 228 504 -15 2334 50 13 35 chr2 35661790 35662108 -217594475 + AluY SINE Alu 1 311 0 1719 268 29 34 chr2 35663322 35663934 -217592649 + MER90 LTR ERV1 2 610 -4 399 41 0 0 chr2 35663972 35664021 -217592562 + (CA)n Simple_repeat Simple_repeat 2 50 0 5678 226 41 34 chr2 35664347 35666124 -217590459 + L1ME3A LINE L1 3569 5358 -816 829 262 74 4 chr2 35666187 35666458 -217590125 + L1ME3A LINE L1 5872 6161 -9 22 25 0 25 chr2 35717679 35717697 -217538886 + AT_rich Low_complexity Low_complexity 1 18 -21 772 282 10 10 chr2 35717697 35717998 -217538585 + AluY SINE Alu 1 301 0 22 25 0 25 chr2 35717998 35718019 -217538564 + AT_rich Low_complexity Low_complexity 18 39 0 335 377 15 0 chr2 35719547 35719677 -217536906 - L2 LINE L2 0 3272 3141 313 256 117 7 chr2 35720039 35720176 -217536407 + MER103 DNA DNA 2 153 -13 237 349 0 38 chr2 35720619 35720725 -217535858 + MIR3 SINE MIR 11 112 -96 195 219 0 0 chr2 35720720 35720761 -217535822 - L3 LINE CR1 -14 1563 1523 * 498 115 26 0 chr2 35720825 35720903 -217535680 + MADE1 DNA Mariner 1 80 0 2148 196 45 16 chr2 35721032 35721886 -217534697 - L1M1 LINE L1 -598 7121 6249 * 5423 199 30 52 chr2 35721878 35722492 -217534091 - L1M1 LINE L1 -1682 5883 5258 1782 130 10 81 chr2 35722492 35722800 -217533783 - AluSx SINE Alu -26 286 1 5423 199 30 52 chr2 35722800 35723003 -217533580 - L1M1 LINE L1 -2307 5258 5052 213 39 0 0 chr2 35723003 35723029 -217533554 + (TTG)n Simple_repeat Simple_repeat 2 27 0 5423 199 30 52 chr2 35723029 35723725 -217532858 - L1M1 LINE L1 -2513 5052 4401 * 19037 172 39 14 chr2 35723720 35727439 -217529144 - L1M1 LINE L1 -3733 3832 17 6267 220 53 10 chr2 35727441 35729174 -217527409 - L1 LINE L1 -1433 4713 2906 43895 43 1 2 chr2 35729185 35735334 -217521249 + L1PA3 LINE L1 3 6144 -11 208 135 0 0 chr2 35735499 35735536 -217521047 + (T)n Simple_repeat Simple_repeat 1 37 0 2421 86 0 0 chr2 35735717 35736018 -217520565 + AluY SINE Alu 1 301 -10 2026 252 51 46 chr2 35736026 35736793 -217519790 - L1MD1 LINE L1 -20 6222 5452 330 319 70 13 chr2 35737014 35737171 -217519412 + MIR SINE MIR 53 218 -44 307 296 73 95 chr2 35738458 35738664 -217517919 - L1ME4a LINE L1 -148 5973 5764 2341 86 0 0 chr2 35738664 35738954 -217517629 - AluY SINE Alu -21 290 1 307 296 73 95 chr2 35738954 35739420 -217517163 - L1ME4a LINE L1 -357 5764 5316 188 319 127 66 chr2 35739570 35739783 -217516800 - L2 LINE L2 -833 2481 2256 254 306 0 59 chr2 35742172 35742291 -217514292 + MIR SINE MIR 45 156 -70 1519 91 5 0 chr2 35742681 35742889 -217513694 + L1PA11 LINE L1 5966 6174 0 1063 50 7 0 chr2 35743412 35743551 -217513032 + L1P LINE L1 2226 2365 -3781 29 70 0 0 chr2 35743910 35743967 -217512616 + AT_rich Low_complexity Low_complexity 1 57 0 21 0 0 0 chr2 35744033 35744054 -217512529 + AT_rich Low_complexity Low_complexity 1 21 0 24 67 0 0 chr2 35745800 35745845 -217510738 + AT_rich Low_complexity Low_complexity 1 45 0 25 0 0 0 chr2 35746060 35746085 -217510498 + AT_rich Low_complexity Low_complexity 1 25 0 197 328 8 118 chr2 35746161 35746280 -217510303 - MIR SINE MIR -108 154 49 396 226 80 36 chr2 35746412 35746549 -217510034 + MER103 DNA DNA 14 156 -10 33 43 0 0 chr2 35746675 35746722 -217509861 + AT_rich Low_complexity Low_complexity 1 47 0 1918 179 28 3 chr2 35747040 35747392 -217509191 + MLT1A1 LTR MaLR 5 365 0 278 182 13 52 chr2 35747404 35747481 -217509102 + L1M2 LINE L1 5368 5441 -856 24 32 0 0 chr2 35747481 35747512 -217509071 + AT_rich Low_complexity Low_complexity 1 31 0 319 210 60 20 chr2 35747746 35747846 -217508737 + L1ME4a LINE L1 5769 5872 -249 3914 110 3 2 chr2 35748243 35748815 -217507768 - L1PB1 LINE L1 -3 6148 5576 835 124 0 0 chr2 35748815 35748944 -217507639 + L1P5 LINE L1 5338 5466 -685 342 0 0 0 chr2 35749407 35749445 -217507138 + (TG)n Simple_repeat Simple_repeat 2 39 0 206 355 65 39 chr2 35750218 35750373 -217506210 - MIR SINE MIR -23 239 81 7121 163 29 17 chr2 35751004 35753272 -217503311 - L1MA8 LINE L1 -4 6287 3997 328 299 93 41 chr2 35753611 35753955 -217502628 - L1ME4a LINE L1 -197 5924 5563 27 0 0 0 chr2 35754053 35754080 -217502503 + AT_rich Low_complexity Low_complexity 1 27 0 5031 57 28 0 chr2 35754303 35754956 -217501627 - L1PA7 LINE L1 0 6154 5484 294 215 41 8 chr2 35755096 35755217 -217501366 + (TATATG)n Simple_repeat Simple_repeat 2 126 0 1533 292 51 19 chr2 35755759 35756398 -217500185 - L2 LINE L2 -218 3095 2439 28 48 0 0 chr2 35756480 35756522 -217500061 + AT_rich Low_complexity Low_complexity 1 42 0 1061 260 47 51 chr2 35756983 35758461 -217498122 - L1MD2 LINE L1 -22 6731 5046 2234 94 0 0 chr2 35758461 35758796 -217497787 - AluY SINE Alu 0 336 2 1061 260 47 51 chr2 35758796 35759074 -217497509 - L1MD2 LINE L1 -1707 5046 4768 * 1151 238 52 13 chr2 35759067 35759450 -217497133 - L1MD2 LINE L1 -5167 1376 979 301 301 49 115 chr2 35759563 35759789 -217496794 - L1MD2 LINE L1 -5545 995 785 268 315 141 7 chr2 35761425 35761574 -217495009 - ERVL LTR ERVL -2275 3489 3321 264 352 29 29 chr2 35761771 35761995 -217494588 - ERVL LTR ERVL -2482 3172 2949 1126 221 38 4 chr2 35762157 35762424 -217494159 + L1MB8 LINE L1 5606 5881 -297 2143 134 27 24 chr2 35762730 35763104 -217493479 + THE1C LTR MaLR 1 375 0 367 326 124 5 chr2 35763211 35763429 -217493154 - LTR33A LTR ERVL -275 248 5 24 0 0 0 chr2 35763703 35763727 -217492856 + AT_rich Low_complexity Low_complexity 1 24 0 26 30 0 0 chr2 35766643 35766676 -217489907 + AT_rich Low_complexity Low_complexity 1 33 0 704 270 160 21 chr2 35766933 35767457 -217489126 - L1ME1 LINE L1 -91 6075 5297 633 259 68 36 chr2 35767609 35767860 -217488723 - L1ME1 LINE L1 -1369 4777 4519 * 828 161 52 16 chr2 35767843 35768035 -217488548 - L1MDa LINE L1 -4389 2151 1953 1403 138 12 16 chr2 35768036 35768283 -217488300 - L1PA16 LINE L1 -1 6165 5920 325 285 96 0 chr2 35768306 35768478 -217488105 + L1ME LINE L1 5485 5562 -600 14706 213 31 42 chr2 35768500 35769754 -217486829 - L1PA16 LINE L1 -267 6602 5336 1332 77 25 20 chr2 35769754 35769950 -217486633 + L1PA14 LINE L1 5960 6156 -5 14706 213 31 42 chr2 35769950 35775410 -217481173 - L1PA16 LINE L1 -1533 5336 1 3042 253 72 25 chr2 35775432 35777056 -217479527 - L1MDa LINE L1 -4604 1936 18 216 0 0 0 chr2 35777107 35777131 -217479452 + (CA)n Simple_repeat Simple_repeat 2 25 0 2027 125 7 10 chr2 35777569 35777866 -217478717 - AluSx SINE Alu -16 296 1 235 91 0 0 chr2 35778215 35778248 -217478335 - Alu SINE Alu -205 97 65 1007 175 0 6 chr2 35778248 35778414 -217478169 + AluJb SINE Alu 127 291 -21 187 273 0 0 chr2 35779101 35779145 -217477438 - MIR SINE MIR -64 144 101 22 56 0 0 chr2 35779768 35779804 -217476779 + AT_rich Low_complexity Low_complexity 1 36 0 587 214 8 0 chr2 35780662 35780779 -217475804 + MSTB1 LTR MaLR 315 432 0 3824 219 34 7 chr2 35780803 35781749 -217474834 - L1 LINE L1 -1062 5084 4114 2411 123 6 6 chr2 35781792 35782157 -217474426 - L1PB1 LINE L1 -6 6145 5781 361 110 86 0 chr2 35782157 35782320 -217474263 + (TA)n Simple_repeat Simple_repeat 1 177 0 3463 153 15 5 chr2 35782320 35783099 -217473484 - L1PB1 LINE L1 -360 5791 5010 10972 210 32 54 chr2 35783102 35785951 -217470632 + L1 LINE L1 1664 4572 -1574 744 11 0 0 chr2 35785951 35786040 -217470543 + AluY SINE Alu 213 301 -10 10972 210 32 54 chr2 35786040 35786054 -217470529 + L1 LINE L1 4572 4585 -1561 1905 137 7 0 chr2 35786054 35786332 -217470251 + AluSx SINE Alu 1 280 -32 10972 210 32 54 chr2 35786332 35786781 -217469802 + L1 LINE L1 4585 5002 -1144 5764 237 62 3 chr2 35786786 35788483 -217468100 - L1 LINE L1 -2021 4125 2330 445 163 20 14 chr2 35788488 35788635 -217467948 + (TA)n Simple_repeat Simple_repeat 1 148 0 5715 240 25 34 chr2 35788647 35789896 -217466687 + L1M2 LINE L1 1192 2421 -4427 2257 101 0 0 chr2 35789896 35790192 -217466391 - AluY SINE Alu -15 296 1 5715 240 25 34 chr2 35790192 35790710 -217465873 + L1M2 LINE L1 2421 2942 -3906 231 103 0 0 chr2 35790741 35790780 -217465803 + (TC)n Simple_repeat Simple_repeat 1 39 0 408 20 0 0 chr2 35790782 35790831 -217465752 + (TG)n Simple_repeat Simple_repeat 2 50 0 688 279 40 7 chr2 35790834 35791110 -217465473 + L1M2 LINE L1 4491 4775 -2073 322 259 65 50 chr2 35791110 35791249 -217465334 + L1MD1 LINE L1 2943 3083 -3765 2045 259 101 40 chr2 35791249 35793256 -217463327 + L1MD1 LINE L1 4786 6935 -9 330 285 136 58 chr2 35793439 35793941 -217462642 - HAL1 LINE L1 -569 1938 1398 2644 196 26 16 chr2 35794213 35794790 -217461793 - L1MA7 LINE L1 -132 6159 5577 435 298 36 60 chr2 35794795 35795043 -217461540 - HAL1 LINE L1 -1456 1051 810 789 254 80 57 chr2 35795162 35795615 -217460968 - MLT1C LTR MaLR -4 463 1 287 229 0 60 chr2 35796965 35797048 -217459535 + L2 LINE L2 3227 3304 -9 26 30 0 0 chr2 35797622 35797655 -217458928 + AT_rich Low_complexity Low_complexity 1 33 0 304 264 0 11 chr2 35798295 35798382 -217458201 + L1ME3A LINE L1 45 130 -6266 1805 280 73 25 chr2 35798397 35799764 -217456819 + L1ME3A LINE L1 2118 3520 -2695 25 0 0 0 chr2 35799785 35799810 -217456773 + AT_rich Low_complexity Low_complexity 1 25 0 681 273 143 52 chr2 35800016 35800617 -217455966 + L1ME3A LINE L1 4386 5041 -1174 324 303 33 0 chr2 35800644 35800766 -217455817 + L1ME3A LINE L1 5419 5544 -689 1596 194 67 28 chr2 35800827 35801188 -217455395 - THE1C LTR MaLR 0 375 1 6489 140 232 19 chr2 35801188 35802487 -217454096 - THE1C-int LTR MaLR 0 1580 5 1692 175 52 30 chr2 35802493 35802858 -217453725 - THE1C LTR MaLR -2 373 1 237 304 13 0 chr2 35802858 35802937 -217453646 + L1ME3A LINE L1 5602 5681 -558 1472 286 109 21 chr2 35802942 35803509 -217453074 + MLT1E2 LTR MaLR 3 619 -7 335 316 93 60 chr2 35803568 35803954 -217452629 + L1ME3A LINE L1 5805 6203 -36 1349 233 0 7 chr2 35803987 35804266 -217452317 + AluJo SINE Alu 1 277 -35 38 39 0 0 chr2 35804285 35804337 -217452246 + AT_rich Low_complexity Low_complexity 1 52 0 356 266 133 26 chr2 35804416 35804649 -217451934 + MER5C DNA MER1_type 18 275 -49 21 71 0 0 chr2 35805121 35805163 -217451420 + AT_rich Low_complexity Low_complexity 1 42 0 394 282 27 75 chr2 35806012 35806200 -217450383 - MLT2E LTR ERVL -248 380 202 360 313 43 0 chr2 35806227 35806342 -217450241 - HERVL LTR ERVL -745 4909 4790 1973 139 29 42 chr2 35806460 35806840 -217449743 + THE1C LTR MaLR 1 375 0 6017 212 121 26 chr2 35806906 35808444 -217448139 + MER52A LTR ERV1 1 1755 0 704 215 22 53 chr2 35808467 35808695 -217447888 + L1MB8 LINE L1 5858 6078 -100 1818 185 34 50 chr2 35808702 35809085 -217447498 + MLT2B3 LTR ERVL 5 381 -173 539 112 0 35 chr2 35809086 35809202 -217447381 + (TTCC)n Simple_repeat Simple_repeat 3 114 0 237 86 0 0 chr2 35809202 35809237 -217447346 + MLT2B3 LTR ERVL 357 391 -6 348 211 21 0 chr2 35809249 35809344 -217447239 + L1MB7 LINE L1 6087 6183 -1 1214 201 147 14 chr2 35809574 35810036 -217446547 + Tigger7 DNA MER2_type 25 2587 0 248 318 64 0 chr2 35811877 35811987 -217444596 - MER58 DNA MER1_type -98 117 1 186 188 14 29 chr2 35812150 35812219 -217444364 + (TA)n Simple_repeat Simple_repeat 2 69 0 204 333 0 0 chr2 35812947 35812998 -217443585 + polypurine Low_complexity Low_complexity 4 54 0 419 359 137 0 chr2 35813457 35813800 -217442783 - L1M4 LINE L1 -2033 4113 3724 267 273 20 10 chr2 35813920 35814019 -217442564 - MLT1I LTR MaLR -3 406 307 912 269 145 30 chr2 35814770 35815637 -217440946 - L1M4 LINE L1 -1037 5109 4143 1398 294 66 36 chr2 35815772 35816758 -217439825 - L1MEc LINE L1 -4982 1414 400 1352 246 39 62 chr2 35818501 35819017 -217437566 - L1M4 LINE L1 -798 5348 4845 1277 278 112 13 chr2 35819164 35819797 -217436786 - L1M4 LINE L1 -1866 4280 3585 797 88 0 26 chr2 35819795 35819909 -217436674 - L1PA6 LINE L1 -1125 5021 4911 * 2816 60 2 3 chr2 35819893 35820405 -217436178 + L1PA6 LINE L1 5015 5524 -631 4928 80 5 1 chr2 35820505 35821167 -217435416 + L1PA6 LINE L1 5488 6151 -3 210 37 0 0 chr2 35821820 35821847 -217434736 + (TG)n Simple_repeat Simple_repeat 1 27 0 380 259 109 6 chr2 35821867 35822041 -217434542 - L1M4 LINE L1 -2609 3537 3346 2162 275 41 19 chr2 35822048 35822829 -217433754 + L1ME1 LINE L1 5365 6162 -4 42697 49 4 1 chr2 35823652 35829796 -217426787 - L1PA4 LINE L1 -1 6154 2 321 47 0 0 chr2 35833027 35833070 -217423513 + (TG)n Simple_repeat Simple_repeat 2 44 0 349 224 122 9 chr2 35834626 35834733 -217421850 - L2 LINE L2 -5 3308 3190 201 307 27 0 chr2 35834771 35834846 -217421737 + MIR SINE MIR 173 249 -13 1615 63 10 0 chr2 35834956 35835163 -217421420 - AluSp SINE Alu -12 301 93 7639 142 19 17 chr2 35836027 35836062 -217420521 - L1P LINE L1 -1061 5085 5052 1551 120 4 32 chr2 35836062 35836312 -217420271 - L1PA10 LINE L1 0 6168 5926 7639 142 19 17 chr2 35836312 35837588 -217418995 - L1P LINE L1 -1094 5052 3771 607 94 0 0 chr2 35837598 35837683 -217418900 - L1P LINE L1 -2584 3562 3478 290 79 0 0 chr2 35837692 35837730 -217418853 - L1P LINE L1 -4014 2132 2095 571 250 91 17 chr2 35837730 35837906 -217418677 - MER4E LTR ERV1 -43 723 535 180 180 33 98 chr2 35838358 35838419 -217418164 + L2 LINE L2 3179 3235 -78 23 0 0 0 chr2 35840395 35840418 -217416165 + AT_rich Low_complexity Low_complexity 1 23 0 210 220 0 85 chr2 35840473 35840532 -217416051 - L2 LINE L2 -10 3303 3250 2311 122 33 33 chr2 35840699 35841125 -217415458 + L1PB1 LINE L1 5725 6150 -1 508 275 128 9 chr2 35843497 35843715 -217412868 - MIR SINE MIR 0 262 19 479 146 0 11 chr2 35844802 35844891 -217411692 + (GGAA)n Simple_repeat Simple_repeat 3 90 0 189 0 0 0 chr2 35844901 35844922 -217411661 + (GGGGA)n Simple_repeat Simple_repeat 1 21 0 206 350 67 17 chr2 35845008 35845128 -217411455 - L2 LINE L2 -256 3057 2932 282 300 81 121 chr2 35845184 35845335 -217411248 + LTR67 LTR ERVL 57 213 -344 363 132 40 0 chr2 35845335 35845411 -217411172 + L1MA7 LINE L1 6213 6291 0 282 300 81 121 chr2 35845411 35845779 -217410804 + LTR67 LTR ERVL 213 555 -2 1576 90 43 0 chr2 35846122 35846355 -217410228 - MER75B DNA T2_type 0 243 1 328 234 103 115 chr2 35846868 35847120 -217409463 + MER112 DNA MER1_type 1 249 -11 314 259 118 35 chr2 35849124 35849294 -217407289 + L2 LINE L2 850 1033 -2281 2709 180 123 65 chr2 35849294 35850363 -217406220 - LTR12 LTR ERV1 -134 2295 31 251 363 32 45 chr2 35850365 35850522 -217406061 + L2 LINE L2 1029 1183 -2131 * 1679 305 147 23 chr2 35850519 35851415 -217405168 + L2 LINE L2 2122 3181 -132 1872 146 17 3 chr2 35851415 35851702 -217404881 - AluSx SINE Alu -21 291 1 1679 305 147 23 chr2 35851702 35851853 -217404730 + L2 LINE L2 3181 3312 -1 241 274 11 32 chr2 35852281 35852376 -217404207 - HAL1b LINE L1 -508 840 748 372 378 27 5 chr2 35852894 35853079 -217403504 + L1MEd LINE L1 464 652 -5467 260 308 146 32 chr2 35853290 35853475 -217403108 - MIR SINE MIR 0 262 57 454 276 101 68 chr2 35854476 35855020 -217401563 + MLT1F1 LTR MaLR 3 564 -3 486 301 68 11 chr2 35855503 35855679 -217400904 - MIR SINE MIR -48 214 29 2814 161 17 9 chr2 35855866 35856332 -217400251 + Tigger3b DNA MER2_type 2 471 -760 295 138 11 69 chr2 35856916 35857003 -217399580 + (TATAA)n Simple_repeat Simple_repeat 5 86 0 192 125 47 31 chr2 35857131 35857195 -217399388 + (TATAA)n Simple_repeat Simple_repeat 5 69 0 450 331 84 38 chr2 35857228 35857878 -217398705 + L1PB4 LINE L1 1 1951 -5258 666 255 48 76 chr2 35857912 35858347 -217398236 + L1PB4 LINE L1 1911 2333 -4876 6336 191 26 19 chr2 35858372 35860675 -217395908 + L1PB4 LINE L1 4895 7214 -4 836 259 137 31 chr2 35861946 35862501 -217394082 - L1MC4a LINE L1 -1341 6467 5854 1365 294 85 41 chr2 35862579 35863168 -217393415 - MER50 LTR ERV1 -94 640 26 1300 267 71 58 chr2 35863278 35863808 -217392775 - L1MC4a LINE L1 -824 5322 5288 2281 107 3 0 chr2 35863808 35864116 -217392467 - AluSx SINE Alu -3 309 1 1300 267 71 58 chr2 35864116 35864510 -217392073 - L1MC4a LINE L1 -858 5288 4901 21 36 0 0 chr2 35865016 35865044 -217391539 + AT_rich Low_complexity Low_complexity 1 28 0 1467 207 97 0 chr2 35865179 35865488 -217391095 - MER7A DNA MER2_type 0 346 10 602 95 0 5 chr2 35866687 35866774 -217389809 - L1P4 LINE L1 -686 5477 5393 3838 126 32 3 chr2 35866774 35867090 -217389493 + L1PA15 LINE L1 5525 5830 -335 2176 52 0 4 chr2 35867090 35867361 -217389222 - AluY SINE Alu -5 306 37 3838 126 32 3 chr2 35867361 35867661 -217388922 + L1PA15 LINE L1 5830 6159 -6 602 95 0 5 chr2 35867661 35867672 -217388911 - L1P4 LINE L1 -770 5393 5383 1985 167 26 5 chr2 35868317 35868694 -217387889 - L1MA6 LINE L1 0 6300 5916 2227 81 20 0 chr2 35870036 35870331 -217386252 - AluY SINE Alu -10 301 1 929 152 104 135 chr2 35870630 35870927 -217385656 - AluJo SINE Alu -14 288 1 213 233 0 0 chr2 35872182 35872225 -217384358 + (CATATA)n Simple_repeat Simple_repeat 6 48 0 46 0 0 0 chr2 35872244 35872290 -217384293 + AT_rich Low_complexity Low_complexity 1 46 0 1988 266 50 30 chr2 35872351 35872530 -217384053 - L1ME1 LINE L1 -96 6070 5896 13603 149 27 12 chr2 35872530 35874908 -217381675 + Tigger1 DNA MER2_type 5 2418 0 1988 266 50 30 chr2 35874908 35875661 -217380922 - L1ME1 LINE L1 -270 5896 5127 753 348 26 19 chr2 35875838 35876148 -217380435 - LTR16A LTR ERVL -16 434 123 514 395 40 5 chr2 35876715 35877118 -217379465 - ERVL LTR ERVL -827 4937 4521 237 65 0 0 chr2 35878109 35878140 -217378443 + (CA)n Simple_repeat Simple_repeat 2 32 0 287 170 38 0 chr2 35878208 35878261 -217378322 + L1MA9 LINE L1 6205 6259 -53 476 45 15 0 chr2 35878261 35878328 -217378255 + (TCTA)n Simple_repeat Simple_repeat 4 71 0 403 249 160 6 chr2 35878583 35878764 -217377819 - L1MEd LINE L1 -4964 1155 947 259 307 57 0 chr2 35879070 35879158 -217377425 - L2 LINE L2 0 3313 3221 247 380 141 16 chr2 35879382 35879822 -217376761 - L3 LINE CR1 -103 1474 980 21 0 0 0 chr2 35879828 35879849 -217376734 + AT_rich Low_complexity Low_complexity 1 21 0 552 208 69 52 chr2 35879851 35880082 -217376501 + L1MA9 LINE L1 5902 6136 -176 1481 135 239 24 chr2 35880093 35880427 -217376156 - MSTA LTR MaLR -22 406 1 377 186 39 54 chr2 35880527 35880656 -217375927 + Charlie5 DNA MER1_type 2352 2478 -134 398 345 77 45 chr2 35880663 35881225 -217375358 - L3 LINE CR1 -571 1006 427 1063 212 141 8 chr2 35881330 35881585 -217374998 - AluJb SINE Alu -13 289 1 2124 96 14 0 chr2 35881603 35881894 -217374689 - AluSc SINE Alu -11 298 4 250 397 40 16 chr2 35882095 35882221 -217374362 + L2 LINE L2 3129 3257 -15 924 136 0 0 chr2 35884364 35884496 -217372087 + AluSq/x SINE Alu 1 132 -180 32 26 0 0 chr2 35885618 35885657 -217370926 + AT_rich Low_complexity Low_complexity 1 39 0 202 200 0 0 chr2 35886063 35886085 -217370498 + (TAA)n Simple_repeat Simple_repeat 3 24 -23 2084 139 47 85 chr2 35886085 35886530 -217370053 + MSTA LTR MaLR 1 428 0 202 200 0 0 chr2 35886530 35886552 -217370031 + (TAA)n Simple_repeat Simple_repeat 23 47 0 1252 216 4 30 chr2 35886615 35886884 -217369699 - AluJo SINE Alu -45 267 6 550 354 6 0 chr2 35887193 35887357 -217369226 - MER58A DNA MER1_type 0 165 1 2328 266 54 25 chr2 35888032 35889634 -217366949 - L1MB7 LINE L1 -10 6174 4522 2228 91 7 23 chr2 35889634 35889941 -217366642 + AluSx SINE Alu 1 302 -10 2328 266 54 25 chr2 35889941 35890057 -217366526 - L1MB7 LINE L1 -1662 4522 4411 944 280 0 5 chr2 35890057 35890268 -217366315 - MER82 DNA MER2_type 0 653 444 257 400 27 13 chr2 35890298 35890448 -217366135 + MIR SINE MIR 1 152 -110 21 0 0 0 chr2 35890467 35890488 -217366095 + AT_rich Low_complexity Low_complexity 1 21 0 241 188 29 58 chr2 35890540 35890609 -217365974 - MER82 DNA MER2_type -555 98 32 297 204 24 175 chr2 35890680 35890891 -217365692 - L1MB7 LINE L1 -1804 4342 4164 254 266 25 0 chr2 35890909 35890988 -217365595 + LTR66 LTR ERVL 394 474 -136 382 285 80 0 chr2 35891060 35891211 -217365372 - L1MB7 LINE L1 -2130 4016 3854 5103 183 18 4 chr2 35891215 35892506 -217364077 - L1PA16 LINE L1 0 6166 4852 1101 174 22 84 chr2 35892606 35892930 -217363653 + MER67D LTR ERV1 5 336 -243 7285 43 0 1 chr2 35892931 35893892 -217362691 + L1PA5 LINE L1 5183 6148 -6 526 289 119 32 chr2 35893986 35894298 -217362285 - L1MEc LINE L1 -4189 2374 2036 901 311 108 18 chr2 35894310 35894786 -217361797 - L1MEc LINE L1 -4615 1769 1213 309 51 0 0 chr2 35894786 35894825 -217361758 + (TG)n Simple_repeat Simple_repeat 2 40 0 901 311 108 18 chr2 35894825 35895023 -217361560 - L1MEc LINE L1 -5171 1213 1034 258 275 50 75 chr2 35895236 35895356 -217361227 + L2 LINE L2 3156 3272 0 421 315 47 29 chr2 35897867 35898110 -217358473 + L1ME LINE L1 5336 5579 -587 287 276 19 38 chr2 35898128 35898233 -217358350 + MER94 DNA DNA 10 112 -22 24 0 0 0 chr2 35898483 35898507 -217358076 + AT_rich Low_complexity Low_complexity 1 24 0 25 65 0 0 chr2 35898668 35898714 -217357869 + AT_rich Low_complexity Low_complexity 1 46 0 833 195 22 0 chr2 35898887 35899072 -217357511 - L1MA6 LINE L1 0 6300 6112 2020 216 115 42 chr2 35899491 35900228 -217356355 + L1ME3 LINE L1 5255 6045 -117 22 35 0 0 chr2 35900265 35900294 -217356289 + AT_rich Low_complexity Low_complexity 1 29 0 1512 234 25 50 chr2 35901328 35901678 -217354905 + MER89 LTR ERV1 172 512 -47 1833 166 65 38 chr2 35901678 35902095 -217354488 + MSTC LTR MaLR 1 428 0 1512 234 25 50 chr2 35902095 35902142 -217354441 + MER89 LTR ERV1 512 559 0 218 230 129 72 chr2 35902271 35902410 -217354173 - L2 LINE L2 -1315 1999 1853 2411 74 3 3 chr2 35902836 35903147 -217353436 + AluSp SINE Alu 3 313 0 400 332 89 26 chr2 35903291 35903481 -217353102 + MIR SINE MIR 26 227 -35 216 182 0 0 chr2 35903572 35903616 -217352967 + (CATATA)n Simple_repeat Simple_repeat 5 48 0 284 329 42 35 chr2 35903636 35903779 -217352804 - MIR SINE MIR -82 180 37 2403 94 0 0 chr2 35903841 35904150 -217352433 + AluSc SINE Alu 1 309 0 28 61 0 0 chr2 35904825 35904874 -217351709 + AT_rich Low_complexity Low_complexity 1 49 0 27 29 0 0 chr2 35904958 35904992 -217351591 + AT_rich Low_complexity Low_complexity 1 34 0 226 235 20 0 chr2 35905602 35905653 -217350930 + MER3 DNA MER1_type 32 83 -126 9853 184 50 41 chr2 35905694 35906434 -217350149 + MER89-int LTR ERV1 23 755 -5921 13019 30 4 4 chr2 35906434 35908776 -217347807 - L1PA3 LINE L1 -3 6152 3810 9853 184 50 41 chr2 35908776 35910162 -217346421 + MER89-int LTR ERV1 755 2169 -4507 7831 199 49 19 chr2 35910150 35911795 -217344788 + MER89-int LTR ERV1 2336 4030 -2646 * 223 322 7 105 chr2 35912693 35912845 -217343738 - L3 LINE CR1 -1 1576 1440 499 211 11 22 chr2 35913419 35913599 -217342984 + GA-rich Low_complexity Low_complexity 3 180 0 232 229 34 42 chr2 35916379 35916497 -217340086 - L1ME3 LINE L1 -1 6161 6045 2395 230 51 48 chr2 35916820 35917844 -217338739 - L1ME2 LINE L1 -19 6145 5122 2305 266 39 30 chr2 35917848 35918351 -217338232 + L1ME1 LINE L1 4951 5448 -718 2137 100 0 0 chr2 35918351 35918631 -217337952 - AluSq SINE Alu -28 285 6 2305 266 39 30 chr2 35918631 35919321 -217337262 + L1ME1 LINE L1 5448 6155 -11 268 158 53 0 chr2 35919578 35919673 -217336910 + (TA)n Simple_repeat Simple_repeat 1 100 0 1969 89 0 25 chr2 35920918 35921198 -217335385 + AluY SINE Alu 26 298 -13 753 278 68 36 chr2 35921855 35922164 -217334419 + L1MC1 LINE L1 4035 4353 -1793 5022 181 37 51 chr2 35922167 35923449 -217333134 + L1MC1 LINE L1 5071 6332 -1 1768 240 50 27 chr2 35923911 35924436 -217332147 + L1MD2 LINE L1 5823 6359 0 830 219 72 39 chr2 35924430 35924736 -217331847 - L1ME2 LINE L1 -1286 4860 4545 * 2152 202 13 40 chr2 35924737 35924794 -217331789 - L1PA15-16 LINE L1 -2317 4532 4475 2228 116 0 0 chr2 35924794 35925097 -217331486 - AluSc SINE Alu -6 303 1 2152 202 13 40 chr2 35925097 35925515 -217331068 - L1PA15-16 LINE L1 -2374 4475 4070 2045 228 20 13 chr2 35925585 35926130 -217330453 - L1PA15-16 LINE L1 -4226 2623 2075 1442 224 32 1 chr2 35926156 35926471 -217330112 + L1MB5 LINE L1 5778 6100 -74 962 205 79 68 chr2 35926542 35926952 -217329631 - MER66A LTR ERV1 -13 465 97 358 108 46 15 chr2 35927037 35927102 -217329481 + L1MB5 LINE L1 6096 6162 -12 272 414 101 11 chr2 35927214 35927492 -217329091 + L2 LINE L2 2928 3230 -42 1105 248 64 15 chr2 35927499 35927826 -217328757 - MLT1A1 LTR MaLR -11 354 12 2181 94 3 3 chr2 35928061 35928359 -217328224 + AluSg SINE Alu 1 298 -12 241 257 14 0 chr2 35928502 35928576 -217328007 + T-rich Low_complexity Low_complexity 2 76 0 211 310 101 39 chr2 35928695 35928824 -217327759 - MIR SINE MIR -58 204 68 274 298 111 41 chr2 35929080 35929251 -217327332 + MIR SINE MIR 69 251 -11 471 218 0 0 chr2 35929639 35929726 -217326857 - MER44D DNA MER2_type 0 605 519 229 114 0 0 chr2 35929745 35929789 -217326794 - LTR66 LTR ERVL -173 437 394 1198 141 51 39 chr2 35929805 35930061 -217326522 - MER44D DNA MER2_type -80 529 1 395 209 9 0 chr2 35930222 35930332 -217326251 + (TG)n Simple_repeat Simple_repeat 2 112 0 994 172 47 31 chr2 35930446 35930675 -217325908 + AluJo SINE Alu 87 318 0 536 255 82 20 chr2 35931149 35931345 -217325238 - MIR SINE MIR -1 261 54 21 0 0 0 chr2 35932744 35932765 -217323818 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 35932993 35933015 -217323568 + AT_rich Low_complexity Low_complexity 1 22 0 2015 151 3 0 chr2 35934186 35934497 -217322086 - AluSx SINE Alu 0 312 1 257 297 141 49 chr2 35934502 35934687 -217321896 - MIR SINE MIR -30 232 31 314 23 23 0 chr2 35934698 35934741 -217321842 + (TTCC)n Simple_repeat Simple_repeat 1 44 0 258 314 121 7 chr2 35935933 35936073 -217320510 - MIR SINE MIR -75 187 32 355 217 14 0 chr2 35937118 35937187 -217319396 + MIR SINE MIR 151 220 -42 1862 59 0 0 chr2 35938283 35938504 -217318079 + AluY SINE Alu 80 300 -11 333 0 0 0 chr2 35938931 35938968 -217317615 + (CA)n Simple_repeat Simple_repeat 2 38 0 1733 66 9 0 chr2 35939419 35939647 -217316936 - L1PA8 LINE L1 -4 6168 5939 447 19 0 0 chr2 35940028 35940080 -217316503 + (GGAA)n Simple_repeat Simple_repeat 1 52 0 485 343 116 0 chr2 35940841 35941074 -217315509 - MIR SINE MIR 0 262 3 299 391 31 12 chr2 35942224 35942385 -217314198 - L2 LINE L2 0 3272 3109 792 261 8 19 chr2 35942533 35942801 -217313782 + L1MA9 LINE L1 6014 6278 -34 191 383 62 13 chr2 35942950 35943177 -217313406 - L2 LINE L2 -439 2875 2638 210 222 0 0 chr2 35943194 35943248 -217313335 + (TA)n Simple_repeat Simple_repeat 1 54 0 22 0 0 0 chr2 35944165 35944187 -217312396 + AT_rich Low_complexity Low_complexity 1 22 0 1274 198 0 0 chr2 35944740 35944988 -217311595 + L1PA13 LINE L1 5912 6159 -4 234 219 0 0 chr2 35946549 35946613 -217309970 + GA-rich Low_complexity Low_complexity 2 65 0 239 271 0 0 chr2 35947201 35947264 -217309319 + polypurine Low_complexity Low_complexity 1 63 0 198 303 0 135 chr2 35947823 35947912 -217308671 - L2 LINE L2 -96 3176 3100 37 23 0 0 chr2 35951187 35951231 -217305352 + AT_rich Low_complexity Low_complexity 1 44 0 22 0 0 0 chr2 35951476 35951498 -217305085 + AT_rich Low_complexity Low_complexity 1 22 0 1449 325 49 60 chr2 35951797 35952670 -217303913 + L1MEc LINE L1 38 918 -5478 2152 146 14 30 chr2 35952670 35953040 -217303543 - THE1B LTR MaLR 0 364 1 1449 325 49 60 chr2 35953040 35954216 -217302367 + L1MEc LINE L1 918 2066 -4330 6100 195 42 16 chr2 35954223 35955484 -217301099 + L1MA1 LINE L1 16 1309 -6256 6300 162 53 8 chr2 35955485 35957601 -217298982 + L1MA1 LINE L1 5496 7717 -4 21 0 0 0 chr2 35957601 35957622 -217298961 + AT_rich Low_complexity Low_complexity 1 21 0 2327 98 0 0 chr2 35957622 35957929 -217298654 + AluSg SINE Alu 1 307 -3 386 274 91 48 chr2 35957947 35958155 -217298428 + L1MEc LINE L1 2053 2269 -4127 378 236 47 16 chr2 35958220 35958347 -217298236 + L1MCc LINE L1 39 169 -6254 412 235 77 77 chr2 35958350 35958498 -217298085 + L1MCc LINE L1 279 429 -5994 1928 135 21 0 chr2 35958498 35958786 -217297797 + AluSq SINE Alu 1 294 -19 412 235 77 77 chr2 35958786 35958807 -217297776 + L1MCc LINE L1 428 448 -5975 213 121 0 0 chr2 35958809 35958842 -217297741 + (GGGA)n Simple_repeat Simple_repeat 4 36 0 1042 79 23 17 chr2 35958844 35959021 -217297562 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 1534 306 74 34 chr2 35959403 35961275 -217295308 + L1MCc LINE L1 807 2959 -4163 731 274 33 62 chr2 35961318 35961672 -217294911 + L1MCc LINE L1 4082 4422 -2519 2270 121 0 0 chr2 35961672 35961979 -217294604 - AluSg SINE Alu -3 307 1 731 274 33 62 chr2 35961979 35962076 -217294507 + L1MCc LINE L1 4422 4520 -2421 302 175 12 25 chr2 35962090 35962170 -217294413 + L1ME2 LINE L1 6085 6163 -1 3241 226 51 6 chr2 35963381 35964199 -217292384 - L1MB7 LINE L1 -1 6681 5827 2371 243 15 19 chr2 35964212 35964886 -217291697 - L1MB7 LINE L1 -1858 4786 4116 462 269 22 0 chr2 35964914 35965048 -217291535 - L1MB7 LINE L1 -6384 158 22 255 298 0 0 chr2 35965223 35965280 -217291303 - L2 LINE L2 -2 3270 3214 23 20 0 61 chr2 35966008 35966057 -217290526 + AT_rich Low_complexity Low_complexity 1 46 0 1709 127 0 4 chr2 35966571 35966870 -217289713 + AluSx SINE Alu 51 348 0 186 196 54 18 chr2 35966870 35966926 -217289657 + MER5C DNA MER1_type 153 210 -114 733 286 112 0 chr2 35967827 35968051 -217288532 - MIR SINE MIR -13 249 1 380 355 44 47 chr2 35969252 35969548 -217287035 - L3 LINE CR1 -4 1573 1279 1982 111 27 0 chr2 35969864 35970162 -217286421 + L1PA13 LINE L1 5858 6163 0 24 0 0 0 chr2 35970447 35970471 -217286112 + AT_rich Low_complexity Low_complexity 1 24 0 2117 155 19 16 chr2 35971210 35971584 -217284999 + THE1C LTR MaLR 1 375 0 204 233 17 0 chr2 35972346 35972406 -217284177 + (CAAA)n Simple_repeat Simple_repeat 3 63 0 189 0 0 0 chr2 35973263 35973284 -217283299 + (ACTG)n Simple_repeat Simple_repeat 4 24 0 275 298 35 70 chr2 35973840 35973954 -217282629 + MIR SINE MIR 16 125 -137 2869 323 107 62 chr2 35975387 35977542 -217279041 + L2 LINE L2 256 2651 -662 266 164 0 49 chr2 35977542 35977603 -217278980 - L1MA9 LINE L1 -30 6282 6225 2869 323 107 62 chr2 35977603 35978298 -217278285 + L2 LINE L2 2651 3313 0 195 204 0 0 chr2 35978706 35978755 -217277828 + (TG)n Simple_repeat Simple_repeat 1 49 0 1473 149 8 12 chr2 35978793 35979041 -217277542 + AluSx SINE Alu 50 296 -16 400 304 110 13 chr2 35979327 35979554 -217277029 + MIR SINE MIR 9 257 -5 1926 181 24 3 chr2 35980409 35980791 -217275792 + MLT1B LTR MaLR 1 390 0 30 27 0 0 chr2 35981136 35981173 -217275410 + AT_rich Low_complexity Low_complexity 1 37 0 2195 130 42 10 chr2 35981173 35981339 -217275244 - L1MA1 LINE L1 0 6302 6143 400 175 0 0 chr2 35981339 35981419 -217275164 + MADE1 DNA Mariner 1 80 0 2195 130 42 10 chr2 35981419 35981653 -217274930 - L1MA1 LINE L1 -159 6143 5889 19626 179 22 21 chr2 35981653 35984212 -217272371 - L1MA1 LINE L1 -342 7379 4824 2397 72 0 7 chr2 35984212 35984516 -217272067 + AluY SINE Alu 1 302 -9 19626 179 22 21 chr2 35984516 35985134 -217271449 - L1MA1 LINE L1 -2897 4824 4208 264 209 0 0 chr2 35985134 35985177 -217271406 + 5S rRNA rRNA 1 43 -78 19626 179 22 21 chr2 35985177 35989331 -217267252 - L1MA1 LINE L1 -3513 4208 1 2618 163 59 12 chr2 35989394 35989999 -217266584 + L1MA5 LINE L1 5164 5791 -509 301 154 64 6 chr2 35990003 35990101 -217266482 + (TA)n Simple_repeat Simple_repeat 2 114 -52 2503 171 28 6 chr2 35990101 35990599 -217265984 + L1MA5 LINE L1 5786 6294 -6 301 154 64 6 chr2 35990599 35990656 -217265927 + (TA)n Simple_repeat Simple_repeat 114 166 0 237 178 0 0 chr2 35991096 35991141 -217265442 + (TG)n Simple_repeat Simple_repeat 2 46 0 324 394 59 36 chr2 35992329 35992717 -217263866 - L2 LINE L2 -4 3268 2872 1050 248 79 57 chr2 35992798 35993254 -217263329 - MLT1C LTR MaLR -1 466 1 187 343 39 10 chr2 35993337 35993439 -217263144 - L2 LINE L2 -938 2376 2272 348 245 46 22 chr2 35993579 35993703 -217262880 - MER63 DNA MER1_type -312 748 1 1054 197 5 0 chr2 35993788 35993986 -217262597 + L1PBa LINE L1 2 200 -6663 * 8644 206 10 13 chr2 35993964 35996780 -217259803 + L1PBa LINE L1 618 3644 -3218 2258 75 3 0 chr2 35996780 35997072 -217259511 + AluY SINE Alu 3 295 -16 8644 206 10 13 chr2 35997072 35997453 -217259130 + L1PBa LINE L1 3644 4025 -2837 502 191 0 0 chr2 35997535 35997629 -217258954 - MLT1D LTR MaLR -4 501 408 1129 261 61 71 chr2 35997629 35998119 -217258464 + MLT2B1 LTR ERVL 2 486 -34 793 170 0 14 chr2 35998132 35998273 -217258310 + L1PB4 LINE L1 6006 6144 -12 570 251 78 14 chr2 35999650 35999869 -217256714 - MER96B DNA MER1_type? 0 417 185 233 165 20 0 chr2 35999939 35999995 -217256588 - L1MA2 LINE L1 0 6304 6249 1618 177 35 29 chr2 35999996 36000306 -217256277 - AluJo SINE Alu 0 312 1 25 0 0 0 chr2 36000306 36000331 -217256252 + AT_rich Low_complexity Low_complexity 1 25 0 25 99 0 0 chr2 36000405 36000486 -217256097 + AT_rich Low_complexity Low_complexity 1 81 0 283 254 64 27 chr2 36000603 36000713 -217255870 + MER96B DNA MER1_type? 294 407 -10 26 50 0 0 chr2 36001106 36001146 -217255437 + AT_rich Low_complexity Low_complexity 1 40 0 899 187 34 5 chr2 36002177 36002396 -217254187 - L1MC3 LINE L1 -11 7756 6110 4557 193 61 2 chr2 36002749 36003659 -217252924 - L1MA4 LINE L1 -12 6288 5434 2969 106 33 31 chr2 36003659 36004139 -217252444 + L1PA14 LINE L1 5669 6152 -9 4557 193 61 2 chr2 36004139 36004183 -217252400 - L1MA4 LINE L1 -866 5434 5394 411 21 0 0 chr2 36004183 36004231 -217252352 + (ATG)n Simple_repeat Simple_repeat 2 49 0 4557 193 61 2 chr2 36004231 36004419 -217252164 - L1MA4 LINE L1 -906 5394 5101 4269 187 22 3 chr2 36004414 36005314 -217251269 - L1MA4 LINE L1 -1551 4595 3679 * 1427 211 44 35 chr2 36005330 36005671 -217250912 - L1MC3 LINE L1 -351 7434 7091 5911 206 26 14 chr2 36005671 36007386 -217249197 - L1PA16 LINE L1 -6 6160 4414 1881 138 58 25 chr2 36007386 36007749 -217248834 - THE1C LTR MaLR 0 375 1 5911 206 26 14 chr2 36007749 36008385 -217248198 - L1PA16 LINE L1 -1752 4414 3787 603 210 12 6 chr2 36008854 36009021 -217247562 + CT-rich Low_complexity Low_complexity 1 168 0 230 139 0 0 chr2 36009022 36009058 -217247525 + (TCC)n Simple_repeat Simple_repeat 3 38 0 199 120 20 20 chr2 36009058 36009108 -217247475 + CT-rich Low_complexity Low_complexity 2 51 0 28 61 0 0 chr2 36010164 36010213 -217246370 + AT_rich Low_complexity Low_complexity 1 49 0 241 305 57 43 chr2 36010248 36010389 -217246194 - MIR SINE MIR -44 218 76 3320 183 29 19 chr2 36011234 36011856 -217244727 + L1 LINE L1 52 679 -6886 10114 185 73 4 chr2 36011857 36014143 -217242440 + L1 LINE L1 4118 6561 -1004 363 338 60 66 chr2 36014300 36014884 -217241699 - L2 LINE L2 -217 3055 2478 446 331 8 8 chr2 36015138 36015265 -217241318 + L2 LINE L2 3182 3308 -5 2134 114 7 7 chr2 36015392 36015699 -217240884 - AluSx SINE Alu -5 307 1 315 239 0 14 chr2 36016051 36016122 -217240461 + MLT1C LTR MaLR 398 467 0 21 0 0 0 chr2 36017259 36017280 -217239303 + AT_rich Low_complexity Low_complexity 1 21 0 328 236 55 0 chr2 36017365 36017492 -217239091 + (TA)n Simple_repeat Simple_repeat 2 135 0 524 248 57 0 chr2 36017821 36017962 -217238621 + Charlie1b DNA MER1_type 49 197 -326 221 184 0 20 chr2 36019525 36019574 -217237009 + CT-rich Low_complexity Low_complexity 1 48 0 23 0 0 0 chr2 36019879 36019902 -217236681 + AT_rich Low_complexity Low_complexity 1 23 0 2911 155 20 65 chr2 36020268 36020908 -217235675 - LTR38B LTR ERV1 0 611 1 26 0 0 0 chr2 36021754 36021780 -217234803 + AT_rich Low_complexity Low_complexity 1 26 0 542 324 55 66 chr2 36021954 36022423 -217234160 - L1M4 LINE L1 -2130 4016 3553 988 124 98 0 chr2 36022505 36022658 -217233925 + THE1B LTR MaLR 1 168 -196 216 149 0 0 chr2 36022658 36022705 -217233878 + (T)n Simple_repeat Simple_repeat 1 47 0 5024 17 2 0 chr2 36022708 36023285 -217233298 - L1HS LINE L1 -1 6154 5577 1091 148 23 51 chr2 36023285 36023501 -217233082 + THE1B LTR MaLR 155 364 0 23 0 0 0 chr2 36023582 36023605 -217232978 + AT_rich Low_complexity Low_complexity 1 23 0 249 314 40 32 chr2 36023959 36024083 -217232500 - MIR SINE MIR -130 132 8 453 110 0 0 chr2 36024725 36024798 -217231785 + (CA)n Simple_repeat Simple_repeat 2 74 0 927 209 121 41 chr2 36024799 36025114 -217231469 + MER2 DNA MER2_type 2 341 -3 261 139 0 0 chr2 36025129 36025172 -217231411 + (TG)n Simple_repeat Simple_repeat 2 44 0 236 247 0 67 chr2 36025227 36025316 -217231267 + L1MC4 LINE L1 6615 6697 -1345 507 256 0 87 chr2 36025317 36025512 -217231071 + (TG)n Simple_repeat Simple_repeat 2 179 0 305 286 0 31 chr2 36025524 36025622 -217230961 + (TG)n Simple_repeat Simple_repeat 2 96 0 259 264 0 29 chr2 36025634 36025808 -217230775 + (TG)n Simple_repeat Simple_repeat 2 170 0 421 285 0 34 chr2 36025820 36026179 -217230404 + (TG)n Simple_repeat Simple_repeat 1 346 0 213 220 0 20 chr2 36026194 36026244 -217230339 + (TG)n Simple_repeat Simple_repeat 2 50 0 214 229 0 24 chr2 36026256 36026339 -217230244 + (TG)n Simple_repeat Simple_repeat 2 82 0 239 310 0 30 chr2 36026351 36026451 -217230132 + (TG)n Simple_repeat Simple_repeat 2 98 0 274 248 6 25 chr2 36026463 36026620 -217229963 + (TG)n Simple_repeat Simple_repeat 1 154 0 196 238 33 33 chr2 36026635 36026786 -217229797 + (TATATG)n Simple_repeat Simple_repeat 2 152 0 496 289 6 33 chr2 36026829 36027009 -217229574 + (TATATG)n Simple_repeat Simple_repeat 2 176 0 450 225 30 6 chr2 36027027 36027196 -217229387 + (TA)n Simple_repeat Simple_repeat 2 174 0 414 296 67 67 chr2 36027876 36027971 -217228612 + L2 LINE L2 3074 3168 -145 230 81 27 0 chr2 36027971 36028008 -217228575 + (TA)n Simple_repeat Simple_repeat 2 39 0 414 296 67 67 chr2 36028008 36028152 -217228431 + L2 LINE L2 3167 3313 0 339 304 81 71 chr2 36028571 36028880 -217227703 + MLT1J LTR MaLR 135 446 -65 1806 127 3 48 chr2 36028956 36029102 -217227481 + AluSc SINE Alu 1 127 -182 225 0 0 0 chr2 36029102 36029127 -217227456 + (TA)n Simple_repeat Simple_repeat 1 25 0 1806 127 3 48 chr2 36029127 36029294 -217227289 + AluSc SINE Alu 127 300 -9 410 332 72 21 chr2 36029294 36029487 -217227096 + MIR SINE MIR 59 261 -1 490 246 58 0 chr2 36030242 36030413 -217226170 + L1MA7 LINE L1 6107 6287 -4 2215 71 35 3 chr2 36030424 36030707 -217225876 - AluY SINE Alu -17 294 3 203 146 24 0 chr2 36030876 36030917 -217225666 + (TG)n Simple_repeat Simple_repeat 1 42 0 23 0 0 0 chr2 36031295 36031318 -217225265 + AT_rich Low_complexity Low_complexity 1 23 0 1973 216 90 4 chr2 36032896 36033374 -217223209 + LTR53 LTR ERVL 1 519 0 2392 84 0 0 chr2 36033382 36033678 -217222905 - AluSq SINE Alu -16 297 2 2403 138 95 7 chr2 36036003 36036415 -217220168 + LTR7 LTR ERV1 1 448 -2 17363 111 43 53 chr2 36036417 36039431 -217217152 + HERVH LTR ERV1 1 2984 -4729 912 129 27 0 chr2 36039428 36039575 -217217008 + HERVH LTR ERV1 3140 3290 -4423 * 3197 120 10 8 chr2 36039565 36040073 -217216510 + HERVH LTR ERV1 3492 4000 -3713 * 4353 137 6 1 chr2 36040067 36040726 -217215857 + HERVH LTR ERV1 4488 5149 -2564 1320 148 19 0 chr2 36040727 36040943 -217215640 + HERVH LTR ERV1 5600 5819 -1894 * 2333 111 48 13 chr2 36040941 36041320 -217215263 + HERVH LTR ERV1 7322 7713 0 2741 76 98 2 chr2 36041320 36041729 -217214854 + LTR7 LTR ERV1 1 448 -2 220 349 132 8 chr2 36041729 36041858 -217214725 - MIR SINE MIR -98 164 20 1361 157 62 115 chr2 36043916 36044273 -217212310 - MER7A DNA MER2_type -10 336 1 22 0 0 0 chr2 36044410 36044432 -217212151 + AT_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr2 36044913 36044945 -217211638 + AT_rich Low_complexity Low_complexity 1 32 0 269 271 177 57 chr2 36045046 36045238 -217211345 - MIR SINE MIR -27 235 21 302 45 23 0 chr2 36045626 36045670 -217210913 + (TG)n Simple_repeat Simple_repeat 2 46 0 26 0 0 0 chr2 36045730 36045756 -217210827 + AT_rich Low_complexity Low_complexity 1 26 0 275 198 18 18 chr2 36046341 36046452 -217210131 + (TA)n Simple_repeat Simple_repeat 1 111 0 2752 87 90 2 chr2 36046670 36047082 -217209501 - LTR7 LTR ERV1 -2 448 1 7579 103 37 5 chr2 36047088 36048228 -217208355 - HERVH LTR ERV1 -9 7704 6529 4170 93 2 2 chr2 36048201 36048813 -217207770 - HERVH LTR ERV1 -1333 6380 5769 * 1182 118 38 0 chr2 36048799 36048985 -217207598 - HERVH LTR ERV1 -3033 4680 4488 * 3184 121 18 6 chr2 36048987 36049483 -217207100 - HERVH LTR ERV1 -3720 3993 3492 911 135 7 0 chr2 36049475 36049623 -217206960 - HERVH LTR ERV1 -4425 3288 3140 * 14945 115 14 23 chr2 36049617 36052497 -217204086 - HERVH LTR ERV1 -4726 2987 1 2464 80 11 25 chr2 36052505 36052908 -217203675 - LTR7 LTR ERV1 -8 442 1 1556 240 86 31 chr2 36053035 36053490 -217203093 - MLT2B1 LTR ERVL -40 480 1 277 320 60 10 chr2 36053737 36053837 -217202746 + MER5A DNA MER1_type 3 107 -82 412 234 105 23 chr2 36054265 36054436 -217202147 + L1MC4a LINE L1 5700 5884 -1924 209 250 0 18 chr2 36054443 36054499 -217202084 + (TA)n Simple_repeat Simple_repeat 2 56 0 2406 68 14 0 chr2 36054696 36054991 -217201592 + AluY SINE Alu 4 302 -9 1081 191 4 33 chr2 36056154 36056426 -217200157 - Tigger6a DNA MER2_type -1 1082 819 495 209 72 46 chr2 36056736 36056778 -217199805 + L1MD2 LINE L1 6089 6128 -231 192 40 0 0 chr2 36056778 36056803 -217199780 + (CA)n Simple_repeat Simple_repeat 2 26 0 495 209 72 46 chr2 36056803 36056913 -217199670 + L1MD2 LINE L1 6128 6245 -114 3523 203 47 26 chr2 36056917 36057725 -217198858 - Tigger6a DNA MER2_type -258 825 1 540 144 58 29 chr2 36058744 36058883 -217197700 - Tigger6 DNA MER2_type -147 1450 1308 3750 159 35 5 chr2 36059990 36060739 -217195844 - L1MA4 LINE L1 -1 6299 5529 1638 233 103 24 chr2 36060804 36061272 -217195311 - MLT1D LTR MaLR 0 505 1 233 245 0 0 chr2 36061837 36061890 -217194693 + A-rich Low_complexity Low_complexity 1 53 0 2665 77 6 3 chr2 36061916 36062268 -217194315 + THE1A LTR MaLR 3 355 0 2052 122 27 0 chr2 36062858 36063152 -217193431 - AluSx SINE Alu -10 302 1 1655 143 4 8 chr2 36063954 36064206 -217192377 + AluSx SINE Alu 1 251 -61 2487 70 0 6 chr2 36064631 36064944 -217191639 - AluY SINE Alu 0 311 1 10824 163 14 29 chr2 36065365 36068718 -217187865 + L1PA8A LINE L1 1 3360 -3101 8136 133 13 9 chr2 36068720 36070757 -217185826 + L1PA8A LINE L1 4407 6445 -1 558 207 117 5 chr2 36070787 36070975 -217185608 - L1M4 LINE L1 -809 5337 5129 346 354 132 0 chr2 36071107 36071350 -217185233 - HAL1 LINE L1 -854 1653 1379 391 282 126 15 chr2 36071392 36071654 -217184929 - L1MEd LINE L1 -4936 1183 893 275 359 41 15 chr2 36071726 36071921 -217184662 - L1MEd LINE L1 -5460 659 460 2233 124 5 42 chr2 36071933 36072311 -217184272 - THE1B LTR MaLR 0 364 1 11342 101 12 1 chr2 36072311 36073873 -217182710 - THE1B-int LTR MaLR 0 1580 1 2313 128 8 16 chr2 36073873 36074240 -217182343 - THE1B LTR MaLR 0 364 1 183 129 0 0 chr2 36074425 36074456 -217182127 + (TAA)n Simple_repeat Simple_repeat 2 32 0 2153 241 51 69 chr2 36075446 36075559 -217181024 - L1ME1 LINE L1 -5 6161 6047 2206 92 7 0 chr2 36075559 36075854 -217180729 - AluY SINE Alu -14 297 1 2153 241 51 69 chr2 36075854 36076788 -217179795 - L1ME1 LINE L1 -119 6047 5146 * 3994 181 29 35 chr2 36076772 36077033 -217179550 - L1MB1 LINE L1 0 6168 5907 2305 101 0 0 chr2 36077033 36077331 -217179252 - AluSq SINE Alu -15 298 1 3994 181 29 35 chr2 36077331 36078135 -217178448 - L1MB1 LINE L1 -261 5907 5106 1591 228 75 11 chr2 36078125 36078244 -217178339 - L1MB1 LINE L1 -1768 4378 4268 * 231 114 0 0 chr2 36078244 36078279 -217178304 + (TG)n Simple_repeat Simple_repeat 2 36 0 1591 228 75 11 chr2 36078279 36078629 -217177954 - L1MB1 LINE L1 -1878 4268 3879 611 226 171 13 chr2 36078627 36078866 -217177717 + L1 LINE L1 3424 3700 -2446 * 9991 259 49 11 chr2 36078862 36081725 -217174858 - L1PA13 LINE L1 -3821 2976 2 6161 102 12 8 chr2 36081729 36082628 -217173955 + L1PA13 LINE L1 5260 6162 -1 619 215 0 14 chr2 36082618 36082762 -217173821 + L1 LINE L1 3681 3822 -2324 * 1604 172 4 4 chr2 36082806 36083074 -217173509 - AluSq SINE Alu -14 299 32 495 281 61 37 chr2 36083074 36083320 -217173263 - L1 LINE L1 -1159 4987 4736 319 286 0 0 chr2 36083301 36083413 -217173170 - L1MB1 LINE L1 -2441 3705 3594 * 25 0 0 0 chr2 36084271 36084296 -217172287 + AT_rich Low_complexity Low_complexity 1 25 0 303 266 128 9 chr2 36084509 36084618 -217171965 - MIR SINE MIR -38 224 103 26 50 0 0 chr2 36084619 36084659 -217171924 + AT_rich Low_complexity Low_complexity 1 40 0 24 53 0 0 chr2 36085347 36085385 -217171198 + AT_rich Low_complexity Low_complexity 1 38 0 512 316 106 5 chr2 36085703 36085921 -217170662 - MIR SINE MIR -5 257 18 312 294 40 16 chr2 36085923 36086049 -217170534 + MER94 DNA DNA 5 133 -1 22 35 0 0 chr2 36086355 36086384 -217170199 + AT_rich Low_complexity Low_complexity 1 29 0 29 0 0 0 chr2 36087534 36087563 -217169020 + AT_rich Low_complexity Low_complexity 1 29 0 207 220 0 0 chr2 36087681 36087731 -217168852 + (TA)n Simple_repeat Simple_repeat 2 51 0 202 200 0 0 chr2 36089002 36089042 -217167541 + (CA)n Simple_repeat Simple_repeat 2 41 0 25 31 0 0 chr2 36089429 36089461 -217167122 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr2 36089544 36089572 -217167011 + AT_rich Low_complexity Low_complexity 1 28 0 21 71 0 0 chr2 36090242 36090284 -217166299 + AT_rich Low_complexity Low_complexity 1 42 0 27 62 0 0 chr2 36090633 36090681 -217165902 + AT_rich Low_complexity Low_complexity 1 48 0 24 53 0 0 chr2 36090885 36090923 -217165660 + AT_rich Low_complexity Low_complexity 1 38 0 192 200 0 0 chr2 36091077 36091127 -217165456 + (CATATA)n Simple_repeat Simple_repeat 5 54 0 562 241 15 0 chr2 36091204 36091341 -217165242 + MLT2B1 LTR ERVL 382 520 0 2128 263 73 5 chr2 36092678 36093476 -217163107 - L1MB1 LINE L1 -2896 3250 2399 * 4814 203 29 12 chr2 36093475 36095542 -217161041 + L1PA16 LINE L1 4060 6157 -9 24 0 0 0 chr2 36095544 36095568 -217161015 + AT_rich Low_complexity Low_complexity 1 24 0 789 244 37 63 chr2 36095667 36095937 -217160646 - MLT2B1 LTR ERVL -253 267 5 351 272 114 80 chr2 36096033 36096357 -217160226 - L1ME3A LINE L1 -225 6205 5871 340 239 33 0 chr2 36096376 36096468 -217160115 - L1ME3A LINE L1 -1290 5116 5022 741 275 109 67 chr2 36096479 36097109 -217159474 - L1ME3A LINE L1 -1438 4968 4312 361 318 53 5 chr2 36097485 36097674 -217158909 + LTR67 LTR ERVL 360 557 0 870 324 93 15 chr2 36097781 36098253 -217158330 + L2 LINE L2 1613 2121 -1193 223 313 54 54 chr2 36098341 36098565 -217158018 + L2 LINE L2 3082 3305 -8 1869 268 73 53 chr2 36098887 36100434 -217156149 - L1MDb LINE L1 -4128 2278 748 1589 168 39 95 chr2 36101041 36101451 -217155132 + MER39 LTR ERV1 319 705 -2 378 224 93 0 chr2 36101682 36101789 -217154794 + MIR SINE MIR 134 250 -12 339 233 25 64 chr2 36102193 36102340 -217154243 + Charlie8 DNA MER1_type 140 271 -2146 2323 56 3 13 chr2 36102382 36102684 -217153899 - AluY SINE Alu -12 299 1 348 314 163 13 chr2 36102921 36103074 -217153509 - MER5A DNA MER1_type 0 189 14 22 56 0 0 chr2 36104526 36104562 -217152021 + AT_rich Low_complexity Low_complexity 1 36 0 410 339 106 34 chr2 36106126 36106513 -217150070 + Charlie2 DNA MER1_type 170 584 -2278 234 91 0 0 chr2 36106536 36106569 -217150014 + (TC)n Simple_repeat Simple_repeat 2 34 0 303 216 24 24 chr2 36106569 36106694 -217149889 + (TA)n Simple_repeat Simple_repeat 2 126 0 226 302 0 0 chr2 36106710 36106773 -217149810 + Charlie2b DNA MER1_type 1244 1306 -1476 2249 192 75 0 chr2 36106819 36107314 -217149269 + L1MA10 LINE L1 5793 6324 -10 206 174 22 0 chr2 36109137 36109183 -217147400 + (TA)n Simple_repeat Simple_repeat 2 48 0 24 85 0 0 chr2 36110591 36110650 -217145933 + AT_rich Low_complexity Low_complexity 1 59 0 768 183 53 140 chr2 36111249 36111534 -217145049 + MLT1D-int LTR MaLR 1112 1371 0 1459 236 44 16 chr2 36111663 36112066 -217144517 + MLT1D LTR MaLR 90 593 0 429 279 144 14 chr2 36112689 36112904 -217143679 - HAL1b LINE L1 -7 1341 1099 24 32 0 0 chr2 36112908 36112939 -217143644 + AT_rich Low_complexity Low_complexity 1 31 0 234 149 0 45 chr2 36113530 36113597 -217142986 + (TA)n Simple_repeat Simple_repeat 1 64 0 21 0 0 0 chr2 36113635 36113656 -217142927 + AT_rich Low_complexity Low_complexity 1 21 0 229 293 9 94 chr2 36113785 36113891 -217142692 - L2 LINE L2 -22 3291 3195 1041 264 106 10 chr2 36114226 36114707 -217141876 - L1M4 LINE L1 -1734 4412 3886 811 203 46 10 chr2 36114709 36114983 -217141600 - L1M LINE L1 -736 5426 5136 2077 88 7 14 chr2 36114983 36115280 -217141303 - AluSc SINE Alu -14 295 1 811 203 46 10 chr2 36115280 36115332 -217141251 - L1M LINE L1 -1026 5136 5087 1963 151 35 12 chr2 36115332 36115353 -217141230 + THE1B LTR MaLR 13 32 -332 218 56 28 0 chr2 36115353 36115389 -217141194 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 1963 151 35 12 chr2 36115389 36115711 -217140872 + THE1B LTR MaLR 32 364 0 1450 269 108 21 chr2 36115732 36116554 -217140029 - L1M4 LINE L1 -1110 5036 4143 1942 108 0 37 chr2 36116561 36116856 -217139727 - AluSx SINE Alu -2 310 27 1849 182 16 148 chr2 36116856 36117498 -217139085 - LTR6A LTR ERV1 -1 563 1 242 174 22 0 chr2 36117498 36117544 -217139039 - Alu SINE Alu -136 164 118 2409 246 128 46 chr2 36117545 36119020 -217137563 - L1M4 LINE L1 -1993 4153 2558 1226 271 48 28 chr2 36119028 36119426 -217137157 - MLT1E2 LTR MaLR 0 626 221 591 201 84 70 chr2 36119441 36119699 -217136884 - MLT1E3 LTR MaLR -263 242 4 695 248 57 27 chr2 36119712 36120043 -217136540 - L1M4 LINE L1 -3603 2543 2203 350 312 52 13 chr2 36120377 36120531 -217136052 + L1ME3 LINE L1 123 282 -6114 2090 153 8 16 chr2 36120783 36121161 -217135422 - THE1C LTR MaLR 0 375 1 368 300 97 24 chr2 36121489 36121912 -217134671 + L1ME3 LINE L1 4461 4914 -1301 315 236 16 98 chr2 36122232 36122355 -217134228 + L1ME3 LINE L1 5354 5466 -962 7452 35 0 0 chr2 36122407 36123596 -217132987 - L1PA4 LINE L1 0 6155 4970 374 302 147 41 chr2 36123622 36123963 -217132620 + L1ME3 LINE L1 5551 5931 -300 189 297 27 27 chr2 36124291 36124365 -217132218 - MIR SINE MIR -157 105 32 521 282 39 11 chr2 36124919 36125100 -217131483 + LTR41 LTR ERVL 2 187 -586 392 278 110 38 chr2 36125256 36125465 -217131118 + LTR41 LTR ERVL 549 772 -1 2397 53 0 43 chr2 36127300 36127623 -217128960 + AluY SINE Alu 1 309 -2 3340 93 10 18 chr2 36129650 36130145 -217126438 - L1PA13 LINE L1 -2 6161 5671 1410 204 86 10 chr2 36130145 36130458 -217126125 + MLT1A1 LTR MaLR 29 365 0 1061 197 5 0 chr2 36130781 36130969 -217125614 + MLT1B LTR MaLR 202 390 0 2095 302 130 37 chr2 36131246 36132814 -217123769 + L2 LINE L2 1557 3313 0 188 304 0 0 chr2 36132980 36133026 -217123557 + MIR SINE MIR 106 151 -111 326 280 112 11 chr2 36133658 36133857 -217122726 - L1ME3A LINE L1 -217 5945 5727 382 138 0 0 chr2 36133969 36134034 -217122549 + L1PA16 LINE L1 5724 5788 -380 195 49 73 0 chr2 36134038 36134079 -217122504 + (TA)n Simple_repeat Simple_repeat 1 44 0 1964 194 8 0 chr2 36134080 36134461 -217122122 + L1PA16 LINE L1 5783 6166 0 536 255 58 82 chr2 36134475 36135041 -217121542 - L1ME3A LINE L1 -601 5565 5011 271 347 111 31 chr2 36135224 36135512 -217121071 - L2 LINE L2 -1647 1667 1357 494 354 92 0 chr2 36136825 36137065 -217119518 + MIR SINE MIR 1 262 0 265 197 0 42 chr2 36137179 36137250 -217119333 + (TA)n Simple_repeat Simple_repeat 1 68 0 26 50 0 0 chr2 36137391 36137431 -217119152 + AT_rich Low_complexity Low_complexity 1 40 0 823 184 14 48 chr2 36137570 36137777 -217118806 - L1MC2 LINE L1 -11 6333 6134 729 256 6 0 chr2 36137779 36137947 -217118636 - L1MC2 LINE L1 -499 5845 5677 385 82 0 0 chr2 36137948 36137997 -217118586 + THE1B LTR MaLR 314 362 -2 9303 117 53 3 chr2 36137999 36139430 -217117153 + THE1B-int LTR MaLR 1 1502 -78 799 186 0 111 chr2 36139531 36139730 -217116853 - L1PA16 LINE L1 -17 6149 5973 375 183 0 0 chr2 36139730 36139801 -217116782 + Charlie1 DNA MER1_type 2186 2256 -505 21 36 0 0 chr2 36140038 36140066 -217116517 + AT_rich Low_complexity Low_complexity 1 28 0 289 297 80 9 chr2 36140091 36140138 -217116445 - MIR SINE MIR -19 243 201 1684 142 85 3 chr2 36140138 36140468 -217116115 - MER46B DNA MER2_type -4 232 1 289 297 80 9 chr2 36140468 36140596 -217115987 - MIR SINE MIR -61 201 6 282 203 241 0 chr2 36140840 36140919 -217115664 - MER45 DNA AcHobo -58 120 23 361 200 60 30 chr2 36141328 36141428 -217115155 - L1MC4 LINE L1 -12 8030 7928 216 0 0 0 chr2 36141522 36141546 -217115037 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 1924 97 61 21 chr2 36141563 36141842 -217114741 - AluSg SINE Alu -20 290 1 280 293 131 50 chr2 36142043 36142265 -217114318 + MIR SINE MIR 8 247 -15 3418 126 26 0 chr2 36143193 36143731 -217112852 - L1P3 LINE L1 -5323 552 1 1739 125 0 8 chr2 36144154 36144418 -217112165 + AluY SINE Alu 3 264 -47 1903 247 65 66 chr2 36146470 36147596 -217108987 - L1M4c LINE L1 -3998 2565 1296 24 0 0 0 chr2 36147949 36147973 -217108610 + AT_rich Low_complexity Low_complexity 1 24 0 709 237 30 10 chr2 36149001 36149199 -217107384 + MSTA LTR MaLR 227 428 0 2029 261 57 7 chr2 36149215 36149957 -217106626 - L1MEc LINE L1 -2652 3563 2785 721 302 97 36 chr2 36149953 36150450 -217106133 - L1MEc LINE L1 -5531 865 339 * 207 0 0 0 chr2 36150627 36150650 -217105933 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2343 71 3 3 chr2 36150654 36150949 -217105634 - AluY SINE Alu -16 295 1 627 290 89 33 chr2 36151071 36151581 -217105002 + L1ME3A LINE L1 5366 5940 -230 387 206 160 15 chr2 36151754 36151885 -217104698 - MER74C LTR ERVL -309 151 2 2749 256 57 50 chr2 36151885 36153308 -217103275 + L1ME LINE L1 2448 3880 -2266 552 233 114 11 chr2 36154170 36154346 -217102237 + L1ME LINE L1 5598 5791 -379 230 209 0 0 chr2 36154394 36154437 -217102146 + L1MC/D LINE L1 5686 5728 -605 31 26 0 0 chr2 36156468 36156506 -217100077 + AT_rich Low_complexity Low_complexity 1 38 0 26 30 0 0 chr2 36156533 36156566 -217100017 + AT_rich Low_complexity Low_complexity 1 33 0 279 319 131 11 chr2 36157350 36157610 -217098973 - L1MC/D LINE L1 -2237 5548 5258 944 355 56 24 chr2 36157918 36158453 -217098130 - L3 LINE CR1 -298 1279 728 270 0 0 0 chr2 36158463 36158493 -217098090 + (TG)n Simple_repeat Simple_repeat 1 30 0 234 0 0 0 chr2 36158492 36158518 -217098065 + (GA)n Simple_repeat Simple_repeat 1 26 0 * 22 56 0 0 chr2 36158661 36158697 -217097886 + AT_rich Low_complexity Low_complexity 1 36 0 2094 189 31 24 chr2 36159033 36159456 -217097127 - MSTB LTR MaLR 0 426 1 329 258 58 67 chr2 36160259 36160499 -217096084 + L1MEc LINE L1 1393 1630 -4766 1367 191 82 11 chr2 36160519 36160786 -217095797 + L1PA15 LINE L1 4 289 -6498 1331 197 27 7 chr2 36160811 36161105 -217095478 + L1PA15 LINE L1 2192 2491 -4306 15611 32 0 0 chr2 36161105 36163739 -217092844 - L1PA4 LINE L1 0 6155 3521 9458 44 3 0 chr2 36163740 36164942 -217091641 + L1PA4 LINE L1 2303 3508 -2638 * 16634 209 14 8 chr2 36164938 36168951 -217087632 + L1PA15 LINE L1 2476 6514 -302 240 0 0 0 chr2 36169147 36169174 -217087409 + L1P LINE L1 580 606 -5540 1504 219 53 29 chr2 36169857 36170313 -217086270 + MLT1C LTR MaLR 1 467 0 324 257 29 0 chr2 36170892 36170962 -217085621 + L2 LINE L2 3198 3269 -3 365 279 16 0 chr2 36171557 36171686 -217084897 - MER94 DNA DNA 0 134 4 398 303 103 17 chr2 36171999 36172233 -217084350 - MIR SINE MIR -4 258 5 22 0 0 0 chr2 36172424 36172446 -217084137 + AT_rich Low_complexity Low_complexity 1 22 0 41 0 0 0 chr2 36172510 36172551 -217084032 + AT_rich Low_complexity Low_complexity 1 41 0 36 82 0 0 chr2 36172618 36172703 -217083880 + AT_rich Low_complexity Low_complexity 1 85 0 2068 174 41 32 chr2 36173133 36173680 -217082903 + MLT2A2 LTR ERVL 1 554 0 183 271 29 29 chr2 36173866 36173936 -217082647 + L2 LINE L2 2580 2649 -665 827 221 23 0 chr2 36173949 36174121 -217082462 - MER58A DNA MER1_type -2 222 47 1228 143 18 6 chr2 36174435 36174697 -217081886 - Tigger4(Zombi) DNA MER2_type -84 2647 1 1938 277 26 9 chr2 36174711 36175404 -217081179 + L1MC/D LINE L1 2671 3375 -2771 553 311 0 12 chr2 36175420 36175581 -217081002 + MLT1C LTR MaLR 309 467 0 2863 216 60 20 chr2 36175592 36175656 -217080927 + L1MC/D LINE L1 4351 4411 -1930 2454 64 0 0 chr2 36175656 36175952 -217080631 + AluY SINE Alu 1 296 -15 2863 216 60 20 chr2 36175952 36177096 -217079487 + L1MC/D LINE L1 4411 5598 -743 2652 106 0 0 chr2 36177096 36177455 -217079128 - THE1B LTR MaLR -5 359 1 625 241 123 21 chr2 36179270 36179457 -217077126 + MIR SINE MIR 32 237 -25 184 400 38 0 chr2 36179712 36179817 -217076766 - MIR SINE MIR -102 160 52 290 113 0 19 chr2 36180859 36180912 -217075671 + (TTCC)n Simple_repeat Simple_repeat 4 55 0 1659 190 17 0 chr2 36181348 36181637 -217074946 + MER49 LTR ERV1 1 294 -629 1351 221 85 12 chr2 36181672 36182003 -217074580 + MER4D LTR ERV1 549 903 0 23 0 0 0 chr2 36182276 36182299 -217074284 + AT_rich Low_complexity Low_complexity 1 23 0 6898 43 4 0 chr2 36182572 36183411 -217073172 - L1PA5 LINE L1 0 6154 5313 22 0 0 0 chr2 36183541 36183563 -217073020 + AT_rich Low_complexity Low_complexity 1 22 0 1791 134 29 4 chr2 36183572 36183847 -217072736 - AluSx SINE Alu -30 282 1 280 328 63 58 chr2 36184620 36184794 -217071789 + MER5B DNA MER1_type 1 175 -3 1377 146 218 32 chr2 36185209 36185517 -217071066 + L1PA8A LINE L1 5413 5777 -354 11109 233 26 18 chr2 36185537 36192007 -217064576 + L1MA9 LINE L1 3 5635 -1227 23 33 0 0 chr2 36192763 36192793 -217063790 + AT_rich Low_complexity Low_complexity 1 30 0 24 53 0 0 chr2 36193206 36193244 -217063339 + AT_rich Low_complexity Low_complexity 1 38 0 518 161 0 89 chr2 36193369 36193493 -217063090 - L1PA16 LINE L1 -3 6163 6051 183 261 67 101 chr2 36195796 36195915 -217060668 + L2 LINE L2 3187 3301 -12 308 222 14 0 chr2 36196590 36196662 -217059921 - THE1-int LTR MaLR -1013 567 495 21 36 0 0 chr2 36197356 36197384 -217059199 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 36197529 36197550 -217059033 + AT_rich Low_complexity Low_complexity 1 21 0 2196 190 39 2 chr2 36197684 36198095 -217058488 + MSTB LTR MaLR 1 426 0 817 278 65 51 chr2 36198179 36198611 -217057972 + L1MD2 LINE L1 5919 6356 -3 2392 190 73 2 chr2 36198664 36199170 -217057413 + L1MA9 LINE L1 6348 6889 -139 5488 218 2 0 chr2 36199171 36200322 -217056261 + L1P LINE L1 4051 5203 -943 399 304 137 60 chr2 36201005 36201558 -217055025 + L1MEc LINE L1 741 1336 -5060 472 257 78 69 chr2 36201561 36201880 -217054703 + L1M4 LINE L1 3478 3799 -2347 1250 299 89 20 chr2 36201945 36202972 -217053611 + L1M4 LINE L1 4164 5260 -886 331 338 5 28 chr2 36203118 36203331 -217053252 + L1M4 LINE L1 1470 1677 -4865 1533 323 65 40 chr2 36203367 36204107 -217052476 + L1MA6 LINE L1 11 768 -6021 * 11133 222 49 31 chr2 36204076 36204735 -217051848 + L1MA6 LINE L1 1129 1775 -5167 2025 114 35 7 chr2 36204735 36205024 -217051559 - AluSq SINE Alu -14 299 3 11133 222 49 31 chr2 36205024 36207229 -217049354 + L1MA6 LINE L1 1775 3939 -3003 1934 127 31 3 chr2 36207229 36207521 -217049062 + AluSx SINE Alu 1 300 -12 11133 222 49 31 chr2 36207521 36210676 -217045907 + L1MA6 LINE L1 3939 6942 0 227 333 29 29 chr2 36211821 36211992 -217044591 + L1ME2 LINE L1 27 197 -6226 455 293 62 36 chr2 36212520 36212824 -217043759 + L1ME2 LINE L1 1178 1489 -4934 253 344 23 0 chr2 36212989 36213120 -217043463 + L1ME2 LINE L1 1746 1879 -5064 685 291 38 40 chr2 36213144 36213564 -217043019 + L1ME2 LINE L1 2125 2543 -4579 343 251 86 34 chr2 36213558 36213733 -217042850 + L1ME2 LINE L1 5539 5722 -1219 * 253 137 0 20 chr2 36213753 36213804 -217042779 + LTR66 LTR ERVL 389 438 -172 230 254 152 35 chr2 36213833 36214030 -217042553 + L1ME2 LINE L1 5731 5950 -991 877 271 23 62 chr2 36214147 36214462 -217042121 + L1ME2 LINE L1 6153 6454 -505 475 212 36 15 chr2 36214597 36214734 -217041849 + L1ME2 LINE L1 6473 6612 -347 1821 116 0 4 chr2 36214744 36215021 -217041562 - L1P LINE L1 -1276 4870 4595 998 68 0 0 chr2 36215022 36215154 -217041429 + L1PA8 LINE L1 6041 6172 0 929 272 26 13 chr2 36215167 36215480 -217041103 + L1ME2 LINE L1 6632 6948 -11 302 398 79 11 chr2 36215578 36215857 -217040726 + L3 LINE CR1 1050 1347 -230 23 0 0 0 chr2 36215857 36215880 -217040703 + AT_rich Low_complexity Low_complexity 1 23 0 322 296 23 0 chr2 36216190 36216278 -217040305 + L1MC4 LINE L1 6614 6703 -1339 207 85 64 0 chr2 36216339 36216386 -217040197 + (TA)n Simple_repeat Simple_repeat 2 51 0 25 0 0 0 chr2 36216606 36216631 -217039952 + AT_rich Low_complexity Low_complexity 1 25 0 252 285 31 54 chr2 36217460 36217590 -217038993 + MLT1H LTR MaLR 406 532 -17 288 335 68 11 chr2 36218264 36218455 -217038128 - L2 LINE L2 -683 2631 2430 2061 223 20 17 chr2 36218622 36219206 -217037377 + L1P LINE L1 2810 3395 -2751 1831 133 0 4 chr2 36219634 36219898 -217036685 + AluSc SINE Alu 39 301 -8 1321 229 6 19 chr2 36220793 36221107 -217035476 - AluJb SINE Alu -2 310 1 225 147 88 29 chr2 36221192 36221260 -217035323 - L1MC4 LINE L1 0 8042 7971 363 137 0 0 chr2 36221316 36221389 -217035194 + (CA)n Simple_repeat Simple_repeat 1 73 0 1698 239 109 66 chr2 36221421 36222259 -217034324 - L1MC4 LINE L1 -146 7896 7023 2062 133 130 11 chr2 36222837 36223213 -217033370 + MSTA LTR MaLR 1 421 -7 180 152 0 0 chr2 36223558 36223591 -217032992 + T-rich Low_complexity Low_complexity 1 33 0 1959 217 85 79 chr2 36223936 36224757 -217031826 - LTR1B LTR ERV1 0 826 1 234 62 0 0 chr2 36226278 36226310 -217030273 + (TG)n Simple_repeat Simple_repeat 2 33 0 222 150 0 0 chr2 36226313 36226353 -217030230 + (GA)n Simple_repeat Simple_repeat 2 41 0 1607 178 3 11 chr2 36227373 36227660 -217028923 + AluJo SINE Alu 5 289 -23 450 0 0 0 chr2 36227750 36227800 -217028783 + (TA)n Simple_repeat Simple_repeat 1 50 0 660 152 9 0 chr2 36228508 36228613 -217027970 + THE1C LTR MaLR 270 375 0 5630 133 51 63 chr2 36228613 36229672 -217026911 + THE1C-int LTR MaLR 1 1046 -534 3700 120 9 2 chr2 36230059 36230600 -217025983 + THE1C-int LTR MaLR 1036 1580 0 470 160 53 114 chr2 36230600 36230731 -217025852 + THE1C LTR MaLR 1 123 -252 714 142 8 17 chr2 36230751 36230871 -217025712 + THE1C LTR MaLR 256 374 -1 23 54 0 0 chr2 36233189 36233226 -217023357 + AT_rich Low_complexity Low_complexity 1 37 0 321 325 114 23 chr2 36233309 36233339 -217023244 - MIR SINE MIR -18 244 218 547 113 0 0 chr2 36233339 36233419 -217023164 + MADE1 DNA Mariner 1 80 0 321 325 114 23 chr2 36233419 36233603 -217022980 - MIR SINE MIR -44 218 16 918 201 13 27 chr2 36233615 36233839 -217022744 + L1PB4 LINE L1 5929 6149 -7 1171 149 13 53 chr2 36233949 36234177 -217022406 - THE1C LTR MaLR 0 375 157 2729 283 65 33 chr2 36234179 36236435 -217020148 - L1MEc LINE L1 -2123 4092 1628 2222 128 3 3 chr2 36236463 36236814 -217019769 - L1PA13 LINE L1 -19 6144 5794 347 213 16 10 chr2 36237067 36237079 -217019504 + MER74A LTR ERVL 267 277 -345 2029 95 49 0 chr2 36237079 36237363 -217019220 - AluY SINE Alu -13 298 1 347 213 16 10 chr2 36237363 36237449 -217019134 + MER74A LTR ERVL 277 426 -196 1085 255 117 57 chr2 36237570 36238781 -217017802 - L1MEc LINE L1 -3685 2879 1656 423 343 40 28 chr2 36238782 36239106 -217017477 - L1MEc LINE L1 -5144 901 574 683 300 84 37 chr2 36239653 36239950 -217016633 - L2 LINE L2 -2 3311 3001 188 375 135 0 chr2 36240446 36240542 -217016041 + L2 LINE L2 3156 3264 -8 243 0 0 0 chr2 36240697 36240724 -217015859 + (TTTTA)n Simple_repeat Simple_repeat 3 29 0 5104 30 0 0 chr2 36240725 36241327 -217015256 - L1PA3 LINE L1 0 6155 5554 2462 19 1 0 chr2 36241330 36241730 -217014853 + L1PA3 LINE L1 5155 5555 -600 421 249 154 30 chr2 36243516 36243685 -217012898 + MIR SINE MIR 72 261 -1 258 32 0 0 chr2 36243768 36243799 -217012784 + (CA)n Simple_repeat Simple_repeat 2 32 0 804 187 42 8 chr2 36244938 36245124 -217011459 + MER61D LTR ERV1 259 434 0 25 0 0 0 chr2 36245722 36245747 -217010836 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr2 36245999 36246024 -217010559 + AT_rich Low_complexity Low_complexity 1 25 0 1077 217 57 102 chr2 36246244 36246994 -217009589 - LTR8A LTR ERV1 -34 693 1 313 303 45 11 chr2 36248653 36248742 -217007841 + L2 LINE L2 3169 3260 -12 464 139 13 0 chr2 36250024 36250103 -217006480 + MADE1 DNA Mariner 1 80 0 243 225 14 28 chr2 36250444 36250515 -217006068 + CT-rich Low_complexity Low_complexity 2 71 0 204 362 65 43 chr2 36251077 36251309 -217005274 + L2 LINE L2 2182 2418 -896 186 43 0 0 chr2 36251320 36251343 -217005240 + (T)n Simple_repeat Simple_repeat 1 23 0 4635 128 4 15 chr2 36251541 36252293 -217004290 + L1PA13 LINE L1 5417 6160 -3 517 183 0 9 chr2 36252296 36252409 -217004174 + L1MA4 LINE L1 6068 6170 -121 252 164 0 0 chr2 36252393 36252448 -217004135 + L1MA4A LINE L1 6244 6298 -5 * 197 253 189 21 chr2 36252710 36252805 -217003778 - MIR SINE MIR -150 112 2 270 367 36 0 chr2 36253564 36253703 -217002880 + MIR SINE MIR 63 206 -56 616 237 35 40 chr2 36254102 36254275 -217002308 - MER20 DNA MER1_type -5 214 43 295 89 36 0 chr2 36254994 36255050 -217001533 + CT-rich Low_complexity Low_complexity 2 59 0 590 333 59 26 chr2 36255144 36255414 -217001169 + L3 LINE CR1 788 1066 -511 338 327 14 23 chr2 36256071 36256285 -217000298 - L1M4 LINE L1 -3358 2788 2577 2082 176 59 5 chr2 36256704 36257108 -216999475 + MSTB LTR MaLR 1 426 0 285 109 0 0 chr2 36257451 36257497 -216999086 + (CA)n Simple_repeat Simple_repeat 2 47 0 480 312 62 10 chr2 36257775 36258083 -216998500 + L1MCc LINE L1 1165 1488 -4935 291 300 28 9 chr2 36358439 36358565 -216898018 + GA-rich Low_complexity Low_complexity 2 220 0 196 333 26 87 chr2 36359274 36359469 -216897114 + MIR3 SINE MIR 16 198 -10 198 0 0 0 chr2 36360278 36360300 -216896283 + (A)n Simple_repeat Simple_repeat 1 22 0 1824 76 4 12 chr2 36360487 36360737 -216895846 - L1PA7 LINE L1 -1 6153 5906 2472 77 0 10 chr2 36362162 36362474 -216894109 + AluSc SINE Alu 1 309 0 24 0 0 0 chr2 36362585 36362609 -216893974 + AT_rich Low_complexity Low_complexity 1 24 0 204 40 0 0 chr2 36363258 36363283 -216893300 + (CA)n Simple_repeat Simple_repeat 2 26 0 2440 82 0 0 chr2 36363878 36364183 -216892400 + AluY SINE Alu 1 305 -6 223 304 43 54 chr2 36364639 36364731 -216891852 - L2 LINE L2 -27 3286 3196 3190 177 38 11 chr2 36367060 36367687 -216888896 - LTR48B LTR ERV1 0 644 1 184 290 10 80 chr2 36367778 36367878 -216888705 - MIR SINE MIR -50 212 120 1858 108 0 8 chr2 36368414 36368673 -216887910 + AluSq SINE Alu 57 313 0 792 184 87 94 chr2 36369122 36369618 -216886965 - L1MC3 LINE L1 -9 7776 7278 2389 83 0 10 chr2 36369618 36369930 -216886653 - AluSc SINE Alu 0 309 1 240 246 0 0 chr2 36369930 36369987 -216886596 - MLT1F1 LTR MaLR -476 91 35 792 184 87 94 chr2 36369987 36370327 -216886256 - L1MC3 LINE L1 -505 7280 6762 491 317 56 6 chr2 36370328 36370508 -216886075 + MIR SINE MIR 23 211 -51 269 151 19 0 chr2 36370734 36370787 -216885796 + (CA)n Simple_repeat Simple_repeat 2 55 0 239 340 0 11 chr2 36371537 36371631 -216884952 + T-rich Low_complexity Low_complexity 4 96 0 23 0 0 0 chr2 36372033 36372056 -216884527 + AT_rich Low_complexity Low_complexity 1 23 0 2140 111 3 10 chr2 36372174 36372472 -216884111 + AluSq SINE Alu 1 296 -17 6326 30 19 0 chr2 36372877 36373622 -216882961 - L1PA3 LINE L1 0 6155 5397 5101 24 2 2 chr2 36373617 36374242 -216882341 + L1PA3 LINE L1 4770 5394 -752 * 696 284 121 26 chr2 36374259 36374572 -216882011 - MLT1J LTR MaLR -166 345 3 241 254 14 14 chr2 36375004 36375068 -216881515 + CT-rich Low_complexity Low_complexity 2 68 -4 207 0 0 0 chr2 36375068 36375091 -216881492 + (CA)n Simple_repeat Simple_repeat 1 23 0 288 310 177 0 chr2 36375941 36376099 -216880484 - LTR16A1 LTR ERVL -6 451 266 532 341 75 42 chr2 36376202 36376803 -216879780 - HERVL LTR ERVL -3553 2101 1481 444 324 59 13 chr2 36376822 36377060 -216879523 - HERVL LTR ERVL -3642 1354 1106 189 74 0 0 chr2 36378560 36378587 -216877996 + (TCCA)n Simple_repeat Simple_repeat 2 28 0 2037 156 47 3 chr2 36379142 36379507 -216877076 + L1PB4 LINE L1 5764 6144 -12 196 241 19 74 chr2 36379517 36379571 -216877012 - L2 LINE L2 -74 3239 3189 706 224 58 5 chr2 36380606 36380811 -216875772 + L1ME2 LINE L1 5687 5902 -262 1437 181 25 25 chr2 36380811 36381093 -216875490 + Tigger3b DNA MER2_type 1 282 -949 2425 133 77 12 chr2 36381095 36381500 -216875083 - MSTB1 LTR MaLR 0 432 2 1148 153 31 0 chr2 36381505 36381701 -216874882 + Tigger3b DNA MER2_type 279 480 -751 2127 120 7 3 chr2 36381757 36382057 -216874526 - AluSx SINE Alu -11 301 1 6739 56 20 0 chr2 36382299 36383225 -216873358 - L1PA6 LINE L1 -3 6151 5203 337 302 39 123 chr2 36383594 36384001 -216872582 + L2 LINE L2 2941 3313 0 254 95 24 0 chr2 36384284 36384326 -216872257 + (TA)n Simple_repeat Simple_repeat 2 44 0 321 321 36 9 chr2 36384690 36384802 -216871781 + HAL1b LINE L1 561 675 -673 2179 60 0 4 chr2 36385317 36385583 -216871000 + AluY SINE Alu 35 299 -12 309 340 43 21 chr2 36385891 36386079 -216870504 + MIR SINE MIR 53 244 -18 267 218 69 30 chr2 36386099 36386200 -216870383 + L1ME LINE L1 5778 5882 -239 407 280 198 37 chr2 36387672 36387915 -216868668 + L2 LINE L2 2574 2855 -459 406 324 175 16 chr2 36387968 36388277 -216868306 + L2 LINE L2 2956 3313 0 477 331 22 7 chr2 36389234 36389503 -216867080 - L1M4 LINE L1 -968 5178 4906 310 286 12 0 chr2 36390031 36390115 -216866468 + (TA)n Simple_repeat Simple_repeat 1 85 0 247 157 20 0 chr2 36390116 36390167 -216866416 - L1MEc LINE L1 -4315 1995 1944 353 274 43 70 chr2 36390404 36390556 -216866027 - L1MEc LINE L1 -4553 1576 1421 453 36 0 0 chr2 36390556 36390611 -216865972 + (TG)n Simple_repeat Simple_repeat 1 55 0 180 0 0 0 chr2 36390610 36390630 -216865953 + (GA)n Simple_repeat Simple_repeat 1 20 0 * 353 274 43 70 chr2 36390611 36390850 -216865733 - L1MEc LINE L1 -4708 1421 1214 409 288 83 72 chr2 36390866 36391399 -216865184 - L1MEc LINE L1 -4918 1207 704 251 376 10 0 chr2 36391443 36391544 -216865039 - L1MEc LINE L1 -5482 637 536 614 272 0 0 chr2 36392547 36392683 -216863900 + MIR SINE MIR 39 174 -88 261 282 129 0 chr2 36392765 36392850 -216863733 - MIR SINE MIR -108 154 59 2078 116 7 0 chr2 36393104 36393388 -216863195 - AluSp SINE Alu -25 288 3 2180 116 0 0 chr2 36393688 36393981 -216862602 - AluSq SINE Alu -20 293 1 600 273 44 34 chr2 36394675 36394880 -216861703 + MER63A DNA MER1_type 4 210 0 372 253 116 47 chr2 36395056 36395246 -216861337 - L2 LINE L2 -2 3311 3109 430 262 86 64 chr2 36396740 36397053 -216859530 + L1M4 LINE L1 3175 3494 -2652 929 258 73 21 chr2 36397203 36397629 -216858954 + L1M4 LINE L1 3535 3982 -2164 2760 66 0 8 chr2 36397675 36398038 -216858545 + L1PA13 LINE L1 5785 6144 -19 1782 169 0 10 chr2 36398115 36398405 -216858178 + AluJo SINE Alu 1 287 -25 244 47 23 23 chr2 36398415 36398458 -216858125 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 207 0 0 0 chr2 36398727 36398750 -216857833 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 667 288 25 10 chr2 36399009 36399207 -216857376 + MIR SINE MIR 59 259 -3 2403 66 0 10 chr2 36399883 36400185 -216856398 + AluY SINE Alu 1 299 -12 2272 145 28 14 chr2 36402912 36403271 -216853312 + THE1B LTR MaLR 1 364 0 442 308 31 36 chr2 36403405 36403600 -216852983 - MIR SINE MIR -55 207 14 217 0 29 29 chr2 36403641 36403675 -216852908 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1360 194 51 11 chr2 36403862 36404212 -216852371 - MER69 DNA AcHobo -2 2524 2161 315 0 0 0 chr2 36404654 36404689 -216851894 + (CA)n Simple_repeat Simple_repeat 2 36 0 226 208 19 38 chr2 36404707 36404760 -216851823 - L2 LINE L2 -26 3287 3236 2115 117 0 0 chr2 36405137 36405451 -216851132 - AluSx SINE Alu 0 314 1 286 360 94 23 chr2 36406394 36406874 -216849709 + L2 LINE L2 1992 2505 -809 200 167 0 0 chr2 36407554 36407584 -216848999 + polypurine Low_complexity Low_complexity 2 31 0 276 343 12 47 chr2 36407585 36407757 -216848826 + MIR SINE MIR 41 206 -56 711 247 18 12 chr2 36408301 36408471 -216848112 + MIR SINE MIR 35 205 -57 226 370 52 32 chr2 36408525 36408679 -216847904 + L2 LINE L2 3112 3268 -4 257 364 83 8 chr2 36409554 36409675 -216846908 + L2 LINE L2 3143 3272 0 269 361 30 6 chr2 36409908 36410077 -216846506 + L1MEc LINE L1 619 791 -6034 293 293 71 11 chr2 36410699 36410938 -216845645 + L1MEc LINE L1 1489 1887 -4832 369 306 19 13 chr2 36410994 36411151 -216845432 + L1MEc LINE L1 2028 2185 -4640 432 237 61 15 chr2 36411215 36411346 -216845237 - L1MC2 LINE L1 -27 6317 6181 * 2497 232 77 28 chr2 36411342 36412443 -216844140 - L1MCb LINE L1 -4851 1194 338 564 178 0 45 chr2 36412500 36412634 -216843949 - L1M2 LINE L1 -655 5507 5381 936 247 47 30 chr2 36412635 36412935 -216843648 - L1MCb LINE L1 -5740 305 1 1353 253 72 36 chr2 36412954 36413862 -216842721 + L1ME LINE L1 4848 5794 -370 * 5017 229 28 20 chr2 36413847 36414672 -216841911 + L1PA15-16 LINE L1 2729 3546 -3303 1789 167 7 0 chr2 36414672 36414995 -216841588 - AluJb SINE Alu 0 329 5 5017 229 28 20 chr2 36414995 36415843 -216840740 + L1PA15-16 LINE L1 3546 4422 -2427 928 205 0 0 chr2 36415843 36416014 -216840569 - MER1B DNA MER1_type -126 171 1 544 332 57 34 chr2 36416036 36416497 -216840086 - L2 LINE L2 -129 3184 2712 12040 215 21 13 chr2 36417188 36420410 -216836173 - L1 LINE L1 -1303 4843 1613 3101 211 78 6 chr2 36420431 36422051 -216834532 - L1PBa LINE L1 -4867 1996 115 729 203 7 0 chr2 36422171 36422314 -216834269 - L1P LINE L1 -1490 4656 4513 930 121 0 61 chr2 36422316 36422481 -216834102 + MER1B DNA MER1_type 185 339 0 510 295 34 29 chr2 36422560 36422767 -216833816 + MIR SINE MIR 49 256 -6 339 270 78 17 chr2 36424030 36424145 -216832438 - L2 LINE L2 -2 3311 3190 451 245 0 0 chr2 36424488 36424582 -216832001 - Charlie1 DNA MER1_type -2 2759 2666 2108 133 0 3 chr2 36424588 36424896 -216831687 - AluSx SINE Alu -5 307 1 2358 82 0 0 chr2 36425049 36425340 -216831243 - AluY SINE Alu -20 291 1 781 170 17 37 chr2 36425365 36425538 -216831045 - MLT1A1 LTR MaLR 0 396 199 21 89 0 0 chr2 36427246 36427302 -216829281 + AT_rich Low_complexity Low_complexity 1 56 0 256 313 26 9 chr2 36427610 36427725 -216828858 + L2 LINE L2 2154 2270 -1044 248 391 62 6 chr2 36427758 36427937 -216828646 - MIR3 SINE MIR 0 208 20 21 0 0 0 chr2 36428914 36428935 -216827648 + AT_rich Low_complexity Low_complexity 1 21 0 618 123 35 0 chr2 36428935 36429106 -216827477 + (TA)n Simple_repeat Simple_repeat 1 177 0 36 0 0 0 chr2 36429106 36429142 -216827441 + AT_rich Low_complexity Low_complexity 1 36 0 512 267 153 20 chr2 36429423 36429573 -216827010 - MER5A DNA MER1_type -6 183 14 194 284 95 14 chr2 36429687 36429761 -216826822 + MIR SINE MIR 74 153 -109 369 232 5 187 chr2 36429982 36430059 -216826524 - MER5B DNA MER1_type 0 178 156 2229 82 0 4 chr2 36430059 36430367 -216826216 + AluSc SINE Alu 1 307 0 369 232 5 187 chr2 36430367 36430486 -216826097 - MER5B DNA MER1_type -22 156 17 184 221 59 59 chr2 36430675 36430743 -216825840 + MIR SINE MIR 145 212 -50 21 0 0 0 chr2 36431101 36431122 -216825461 + AT_rich Low_complexity Low_complexity 1 21 0 344 190 13 0 chr2 36431800 36431879 -216824704 + (TA)n Simple_repeat Simple_repeat 2 81 0 348 24 0 0 chr2 36431879 36431920 -216824663 + (GA)n Simple_repeat Simple_repeat 2 42 0 265 389 36 67 chr2 36432274 36432808 -216823775 + L2 LINE L2 2758 3272 0 665 258 65 24 chr2 36433093 36433341 -216823242 + L1M4 LINE L1 9 266 -6276 1547 219 61 73 chr2 36433584 36434156 -216822427 + L1M4 LINE L1 624 1188 -5354 522 349 60 13 chr2 36434553 36434785 -216821798 - MIR SINE MIR -13 249 7 2985 209 27 2 chr2 36437106 36437691 -216818892 + MER77 LTR ERV1 3 602 -3 23 54 0 0 chr2 36437934 36437971 -216818612 + AT_rich Low_complexity Low_complexity 1 37 0 2244 122 0 0 chr2 36439264 36439567 -216817016 - AluJb SINE Alu -9 303 1 210 218 177 65 chr2 36439571 36439695 -216816888 + L2 LINE L2 3174 3311 -2 372 138 0 0 chr2 36439732 36439797 -216816786 + (TG)n Simple_repeat Simple_repeat 2 66 0 218 181 24 121 chr2 36440886 36440969 -216815614 + MIR3 SINE MIR 2 76 -132 1732 171 68 3 chr2 36441023 36441345 -216815238 + MER2 DNA MER2_type 2 344 0 392 244 146 0 chr2 36441646 36441769 -216814814 - MIR SINE MIR -71 191 51 1049 171 65 28 chr2 36441791 36442008 -216814575 - AluJo SINE Alu -1 311 87 273 221 0 0 chr2 36443426 36443494 -216813089 + (TA)n Simple_repeat Simple_repeat 1 68 0 24 0 0 0 chr2 36443634 36443658 -216812925 + AT_rich Low_complexity Low_complexity 1 24 0 393 249 249 0 chr2 36443854 36444027 -216812556 - MIR SINE MIR 0 262 47 1989 213 77 22 chr2 36444272 36444364 -216812219 + MER45B DNA AcHobo 1 86 -954 2310 117 20 6 chr2 36444364 36444714 -216811869 - THE1A LTR MaLR 0 355 1 11860 87 6 2 chr2 36444714 36446288 -216810295 - THE1A-int LTR MaLR 0 1580 1 2217 117 14 25 chr2 36446288 36446647 -216809936 - THE1A LTR MaLR 0 355 1 1989 213 77 22 chr2 36446647 36446862 -216809721 + MER45B DNA AcHobo 86 288 -752 1924 182 40 0 chr2 36446862 36447213 -216809370 + MLT1A1 LTR MaLR 1 365 0 1989 213 77 22 chr2 36447213 36447656 -216808927 + MER45B DNA AcHobo 288 856 -184 644 156 94 99 chr2 36447755 36447947 -216808636 + MER45B DNA AcHobo 848 1038 -2 473 333 52 10 chr2 36448867 36449176 -216807407 + HAL1 LINE L1 1413 1734 -773 235 229 0 62 chr2 36449821 36449917 -216806666 + L1MC4a LINE L1 3855 3944 -2202 21 0 0 0 chr2 36450078 36450099 -216806484 + AT_rich Low_complexity Low_complexity 1 21 0 247 263 45 0 chr2 36450152 36450285 -216806298 + (TA)n Simple_repeat Simple_repeat 1 139 0 668 324 68 22 chr2 36450536 36451020 -216805563 + L1MC4a LINE L1 5329 5842 -1966 1463 258 94 43 chr2 36451020 36451583 -216805000 - MLT1G1 LTR MaLR 0 595 4 668 324 68 22 chr2 36451583 36451638 -216804945 + L1MC4a LINE L1 5842 5893 -1915 779 191 0 0 chr2 36451647 36451783 -216804800 + FRAM SINE Alu 24 159 -17 322 250 105 40 chr2 36452355 36452479 -216804104 - MIR SINE MIR -3 259 128 326 306 106 12 chr2 36452653 36452813 -216803770 - MIR3 SINE MIR -25 183 9 255 31 0 0 chr2 36453492 36453524 -216803059 + (TG)n Simple_repeat Simple_repeat 2 33 0 303 334 53 3 chr2 36454335 36454468 -216802115 + MIR SINE MIR 20 156 -52 1891 179 47 34 chr2 36454656 36455065 -216801518 - MLT2D LTR ERVL 0 414 1 244 325 198 6 chr2 36456121 36456278 -216800305 + MIR SINE MIR 12 198 -64 186 347 40 0 chr2 36456342 36456417 -216800166 - L2 LINE L2 -9 3263 3186 507 309 144 27 chr2 36456445 36456701 -216799882 + MLT1J LTR MaLR 26 311 -200 253 293 98 8 chr2 36456782 36456915 -216799668 - LTR16A1 LTR ERVL -221 236 92 2361 302 107 21 chr2 36457170 36457560 -216799023 + L2 LINE L2 1790 2145 -1168 884 209 67 24 chr2 36457560 36457770 -216798813 - MER20 DNA MER1_type 0 219 1 2361 302 107 21 chr2 36457770 36458582 -216798001 + L2 LINE L2 2145 3123 -190 2034 121 16 38 chr2 36458582 36458896 -216797687 + AluSx SINE Alu 1 307 -5 2361 302 107 21 chr2 36458896 36459106 -216797477 + L2 LINE L2 3123 3313 0 793 267 40 21 chr2 36459217 36459524 -216797059 - MLT1A2 LTR MaLR -4 377 1 286 253 182 0 chr2 36459525 36459624 -216796959 - MIR SINE MIR -100 162 46 236 263 40 0 chr2 36460396 36460472 -216796111 + (TATATG)n Simple_repeat Simple_repeat 4 82 0 258 157 78 0 chr2 36460473 36460524 -216796059 - L2 LINE L2 -68 3245 3191 450 308 184 31 chr2 36460933 36461230 -216795353 - L2 LINE L2 -37 3276 2895 4783 51 2 0 chr2 36461230 36461821 -216794762 - L1PA7 LINE L1 -2 6152 5561 450 308 184 31 chr2 36461821 36461946 -216794637 - L2 LINE L2 -418 2895 2791 21 36 0 0 chr2 36461988 36462016 -216794567 + AT_rich Low_complexity Low_complexity 1 28 0 215 260 0 0 chr2 36463300 36463350 -216793233 + (TA)n Simple_repeat Simple_repeat 1 50 0 4044 223 60 16 chr2 36463372 36464246 -216792337 - MER45B DNA AcHobo -541 1040 115 2171 104 0 13 chr2 36464246 36464545 -216792038 + AluSg1 SINE Alu 1 295 -14 4044 223 60 16 chr2 36464545 36464663 -216791920 - MER45B DNA AcHobo -1466 115 4 527 296 82 19 chr2 36464665 36464871 -216791712 - MIR SINE MIR -35 227 9 1443 67 0 0 chr2 36465075 36465254 -216791329 - L1PA7 LINE L1 -13 6141 5963 482 333 40 17 chr2 36465276 36465450 -216791133 - MIR SINE MIR -83 179 2 243 336 114 7 chr2 36466537 36466686 -216789897 - LTR16C LTR ERVL 0 491 327 354 45 0 0 chr2 36466834 36466878 -216789705 + (CA)n Simple_repeat Simple_repeat 2 45 0 26 30 0 0 chr2 36468054 36468087 -216788496 + AT_rich Low_complexity Low_complexity 1 33 0 253 246 0 0 chr2 36468411 36468468 -216788115 + (TA)n Simple_repeat Simple_repeat 1 57 0 270 312 123 28 chr2 36468589 36468906 -216787677 - L1ME LINE L1 -435 5729 5383 428 323 104 30 chr2 36468919 36469322 -216787261 - L1ME LINE L1 -783 5363 4931 1674 196 50 3 chr2 36469412 36469790 -216786793 - L1MA8 LINE L1 -1 6290 5895 744 285 169 56 chr2 36470246 36470712 -216785871 + MLT2E LTR ERVL 10 528 -100 15214 167 27 18 chr2 36470943 36471862 -216784721 - L1PA13 LINE L1 0 6814 5904 5360 151 34 35 chr2 36471862 36472934 -216783649 + MER11C LTR ERVK 1 1071 0 15214 167 27 18 chr2 36472934 36475680 -216780903 - L1PA13 LINE L1 -910 5904 3123 357 109 0 0 chr2 36475680 36475735 -216780848 + (TG)n Simple_repeat Simple_repeat 2 56 0 15214 167 27 18 chr2 36475735 36475958 -216780625 - L1PA13 LINE L1 -3691 3123 2903 3846 207 45 17 chr2 36475958 36476902 -216779681 - L1PA13 LINE L1 -5778 1009 1 217 131 66 49 chr2 36476933 36476994 -216779589 + T-rich Low_complexity Low_complexity 1 62 0 649 270 38 6 chr2 36477289 36477448 -216779135 + MER45A DNA AcHobo 15 178 0 307 322 147 17 chr2 36478273 36478450 -216778133 - MIR SINE MIR -10 252 53 5060 127 21 4 chr2 36478613 36479403 -216777180 + L1PA15 LINE L1 5354 6157 -8 904 284 120 40 chr2 36479455 36479930 -216776653 - LTR33A LTR ERVL 0 523 11 183 376 24 0 chr2 36480740 36480825 -216775758 + MER5B DNA MER1_type 88 174 -4 194 382 0 0 chr2 36481136 36481212 -216775371 - L3 LINE CR1 -1314 263 188 2138 149 92 20 chr2 36481557 36481960 -216774623 - MSTB1 LTR MaLR 0 432 1 22 0 0 0 chr2 36482256 36482278 -216774305 + AT_rich Low_complexity Low_complexity 1 22 0 223 263 36 57 chr2 36482664 36482766 -216773817 + MIR SINE MIR 19 117 -91 235 333 75 17 chr2 36482888 36483008 -216773575 - L2 LINE L2 -3 3269 3143 8407 123 12 8 chr2 36483451 36483664 -216772919 - HSMAR2 DNA Mariner -1 1301 1090 2500 105 28 22 chr2 36483664 36484026 -216772557 - THE1B LTR MaLR 0 364 1 8407 123 12 8 chr2 36484026 36485107 -216771476 - HSMAR2 DNA Mariner -212 1090 2 243 0 0 0 chr2 36485582 36485609 -216770974 + (A)n Simple_repeat Simple_repeat 1 27 0 639 282 64 46 chr2 36485791 36486071 -216770512 - LTR16A1 LTR ERVL -5 452 168 180 152 0 0 chr2 36486115 36486148 -216770435 + CT-rich Low_complexity Low_complexity 2 34 0 388 332 53 29 chr2 36486424 36486668 -216769915 + MLT1K LTR MaLR 322 571 -17 207 214 0 0 chr2 36487204 36487246 -216769337 + (TTTA)n Simple_repeat Simple_repeat 1 42 0 1623 176 7 10 chr2 36487254 36487544 -216769039 - AluJo SINE Alu -23 289 1 286 261 163 22 chr2 36487544 36487636 -216768947 - L2 LINE L2 -7 3306 3202 180 111 0 0 chr2 36487642 36487669 -216768914 + (TTCTCC)n Simple_repeat Simple_repeat 1 27 0 872 113 10 113 chr2 36487886 36488089 -216768494 + L1MA9 LINE L1 6131 6312 0 2242 271 28 40 chr2 36488218 36488986 -216767597 - L1ME LINE L1 -5212 858 99 1973 149 10 3 chr2 36488986 36489281 -216767302 - AluSx SINE Alu -15 297 1 2242 271 28 40 chr2 36489281 36489347 -216767236 - L1ME LINE L1 -5971 99 34 413 258 48 16 chr2 36490945 36491069 -216765514 + L2 LINE L2 3186 3313 0 1668 237 104 16 chr2 36491874 36493065 -216763518 + L1MC4 LINE L1 6463 7909 -133 206 173 0 19 chr2 36493331 36493383 -216763200 + (TA)n Simple_repeat Simple_repeat 1 51 0 302 213 40 0 chr2 36493617 36493692 -216762891 + MLT1J2 LTR MaLR 1 78 -372 295 327 80 6 chr2 36493690 36493852 -216762731 + MLT1J1 LTR MaLR 273 446 0 * 1887 181 56 42 chr2 36494793 36494826 -216761757 + MER47B DNA MER2_type 1 32 -2291 188 67 33 0 chr2 36494826 36494856 -216761727 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1887 181 56 42 chr2 36494856 36495231 -216761352 + MER47B DNA MER2_type 32 415 -3 392 300 106 44 chr2 36495425 36495652 -216760931 - MIR SINE MIR -13 249 9 1926 61 0 8 chr2 36496440 36496686 -216759897 + AluY SINE Alu 56 299 -12 1628 194 22 3 chr2 36498018 36498373 -216758210 - L1MA5 LINE L1 0 6300 5939 4560 53 9 0 chr2 36498387 36498955 -216757628 - L1PA7 LINE L1 -21 6133 5561 3007 78 22 0 chr2 36499025 36499590 -216756993 - L1P3 LINE L1 -483 5671 5099 * 3616 105 2 2 chr2 36499588 36500113 -216756470 + L1P3 LINE L1 4582 5106 -1040 13721 148 24 12 chr2 36500258 36502587 -216753996 - Tigger1 DNA MER2_type -1 2417 57 1839 162 0 3 chr2 36502587 36502889 -216753694 + AluSx SINE Alu 1 301 -11 13721 148 24 12 chr2 36502889 36502947 -216753636 - Tigger1 DNA MER2_type -2361 57 1 192 182 45 0 chr2 36503557 36503601 -216752982 + L2 LINE L2 2936 2981 -291 238 310 115 0 chr2 36503803 36503890 -216752693 + L2 LINE L2 3122 3218 -54 488 214 61 0 chr2 36504036 36504134 -216752449 - MER5A DNA MER1_type 0 189 86 872 184 69 0 chr2 36504139 36504313 -216752270 + MER5A DNA MER1_type 1 186 -3 2134 234 17 35 chr2 36505323 36505866 -216750717 + LTR31 LTR ERV1 75 607 -12 198 268 18 36 chr2 36505871 36505927 -216750656 + MIR SINE MIR 7 61 -201 496 113 0 25 chr2 36507416 36507496 -216749087 + L1MC1 LINE L1 6251 6328 -5 213 213 0 0 chr2 36507496 36507543 -216749040 + (TA)n Simple_repeat Simple_repeat 2 48 0 260 238 12 0 chr2 36507590 36507674 -216748909 + (TATATG)n Simple_repeat Simple_repeat 4 88 0 1237 188 19 13 chr2 36508677 36508992 -216747591 + MER33 DNA MER1_type 1 288 -36 1330 154 126 14 chr2 36508998 36509291 -216747292 - MER44D DNA MER2_type -13 596 1 1537 158 33 0 chr2 36509377 36509649 -216746934 + L1PA16 LINE L1 5864 6144 -22 2425 108 44 8 chr2 36509889 36510251 -216746332 + THE1C LTR MaLR 1 375 0 9546 118 53 4 chr2 36510251 36511757 -216744826 + THE1C-int LTR MaLR 1 1580 0 2246 124 59 0 chr2 36511757 36512111 -216744472 + THE1C LTR MaLR 1 375 0 27 0 0 0 chr2 36512983 36513010 -216743573 + AT_rich Low_complexity Low_complexity 1 27 0 1555 176 45 21 chr2 36514090 36514159 -216742424 - L1MA7 LINE L1 0 6291 6225 315 49 0 0 chr2 36514159 36514200 -216742383 + (CA)n Simple_repeat Simple_repeat 2 42 0 1555 176 45 21 chr2 36514200 36514504 -216742079 - L1MA7 LINE L1 -66 6225 5909 1760 156 16 9 chr2 36514504 36514824 -216741759 + L1MA7 LINE L1 5580 5901 -390 299 250 115 48 chr2 36516911 36517015 -216739568 - MIR3 SINE MIR -10 198 88 497 307 35 25 chr2 36517170 36517372 -216739211 + MIR SINE MIR 25 228 -34 1333 212 106 44 chr2 36517588 36517927 -216738656 - MLT1A1 LTR MaLR 0 365 6 21 57 0 0 chr2 36517964 36517999 -216738584 + AT_rich Low_complexity Low_complexity 1 35 0 1860 102 4 0 chr2 36518526 36518800 -216737783 + L1MA2 LINE L1 6022 6296 -8 28 0 0 0 chr2 36518807 36518835 -216737748 + AT_rich Low_complexity Low_complexity 1 28 0 2273 91 0 11 chr2 36518838 36519166 -216737417 + AluY SINE Alu 2 326 0 344 103 17 0 chr2 36519695 36519753 -216736830 + (GA)n Simple_repeat Simple_repeat 2 60 0 21 57 0 0 chr2 36520214 36520249 -216736334 + AT_rich Low_complexity Low_complexity 1 35 0 1641 170 40 34 chr2 36520739 36521092 -216735491 + MLT1A1 LTR MaLR 1 355 -10 262 196 0 0 chr2 36521140 36521186 -216735397 - MER58 DNA MER1_type -4 2416 2371 286 340 31 53 chr2 36521527 36521845 -216734738 + MER102b DNA MER1_type 15 325 -16 378 0 0 0 chr2 36522386 36522428 -216734155 + (TG)n Simple_repeat Simple_repeat 1 42 0 30 0 0 0 chr2 36522841 36522871 -216733712 + AT_rich Low_complexity Low_complexity 1 30 0 2032 71 0 8 chr2 36523474 36523728 -216732855 + AluY SINE Alu 44 295 -16 184 422 20 35 chr2 36524130 36524329 -216732254 - L2 LINE L2 -208 3064 2869 224 303 90 49 chr2 36524378 36524500 -216732083 - L2 LINE L2 -504 2810 2684 1705 148 34 0 chr2 36525479 36525742 -216730841 + AluSq SINE Alu 41 312 -1 21 82 0 0 chr2 36525978 36526027 -216730556 + AT_rich Low_complexity Low_complexity 1 49 0 1313 251 18 6 chr2 36526169 36526495 -216730088 - L1ME LINE L1 -5473 597 268 255 366 146 8 chr2 36526495 36526741 -216729842 - L3 LINE CR1 -384 1193 914 573 300 126 14 chr2 36526921 36527198 -216729385 - L2 LINE L2 0 3313 3006 285 303 155 0 chr2 36527204 36527359 -216729224 - L3 LINE CR1 -802 775 597 500 204 0 44 chr2 36527365 36527478 -216729105 - FAM SINE Alu -17 168 61 1278 109 0 11 chr2 36527802 36527976 -216728607 + AluSq SINE Alu 1 172 -141 * 1430 137 0 19 chr2 36527975 36528187 -216728396 + AluSg/x SINE Alu 82 289 -23 23 0 0 0 chr2 36528187 36528210 -216728373 + AT_rich Low_complexity Low_complexity 1 23 0 199 328 78 17 chr2 36528210 36528326 -216728257 + L2 LINE L2 3150 3272 0 21 0 0 0 chr2 36529086 36529107 -216727476 + AT_rich Low_complexity Low_complexity 1 21 0 24 85 0 0 chr2 36529784 36529843 -216726740 + AT_rich Low_complexity Low_complexity 1 59 0 613 206 82 0 chr2 36530047 36530217 -216726366 - L1MA8 LINE L1 -5 6286 6103 2429 136 48 19 chr2 36530217 36530439 -216726144 - Tigger2 DNA MER2_type 0 2718 2504 2020 156 3 0 chr2 36530439 36530747 -216725836 + AluSx SINE Alu 2 310 -2 2429 136 48 19 chr2 36530747 36530957 -216725626 - Tigger2 DNA MER2_type -214 2504 2273 412 134 30 0 chr2 36530947 36531014 -216725569 - Tigger2 DNA MER2_type -2649 69 1 * 1020 182 120 31 chr2 36531049 36531540 -216725043 - L1MA1 LINE L1 -4 6298 5576 5258 77 23 21 chr2 36531545 36532179 -216724404 - L1PA8 LINE L1 -20 6152 5514 2245 60 0 4 chr2 36532179 36532445 -216724138 - AluY SINE Alu -9 302 38 5258 77 23 21 chr2 36532445 36532588 -216723995 - L1PA8 LINE L1 -658 5514 5373 1555 154 16 22 chr2 36532590 36532863 -216723720 - L1MA1 LINE L1 -707 5584 5312 2277 80 3 29 chr2 36532863 36533176 -216723407 - AluY SINE Alu -6 305 1 1555 154 16 22 chr2 36533176 36533214 -216723369 - L1MA1 LINE L1 -979 5312 5275 1969 108 3 28 chr2 36533972 36534259 -216722324 - AluSq SINE Alu -33 280 1 204 135 0 0 chr2 36534296 36534333 -216722250 + (TG)n Simple_repeat Simple_repeat 2 38 0 413 269 8 0 chr2 36534357 36534476 -216722107 + MER97b DNA MER1_type? 60 179 -874 2741 156 79 219 chr2 36534519 36536022 -216720561 + MER52A LTR ERV1 1 1278 0 2163 117 3 7 chr2 36536957 36537264 -216719319 - AluSx SINE Alu -6 306 1 186 43 0 0 chr2 36538127 36538150 -216718433 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 627 250 144 55 chr2 36538511 36538882 -216717701 - MLT1C LTR MaLR -59 442 1 267 208 0 0 chr2 36539173 36539226 -216717357 + L2 LINE L2 3261 3313 0 803 188 0 0 chr2 36539266 36539399 -216717184 + FLAM_A SINE Alu 1 133 0 2448 149 76 24 chr2 36539962 36540539 -216716044 + pTR5 LTR ERV1 738 1344 -1094 4867 103 12 120 chr2 36540555 36541477 -216715106 + LTR12 LTR ERV1 5 826 0 240 373 51 8 chr2 36541478 36541596 -216714987 - L2 LINE L2 -47 3225 3103 181 318 32 0 chr2 36544182 36544245 -216712338 + MIR SINE MIR 35 99 -163 302 165 13 63 chr2 36544675 36544754 -216711829 + MLT1H LTR MaLR 55 129 -420 1813 164 9 21 chr2 36545441 36545776 -216710807 + MER2 DNA MER2_type 1 331 -14 413 292 139 5 chr2 36546486 36546695 -216709888 - L1ME4a LINE L1 -223 5898 5662 1827 206 28 47 chr2 36547874 36548344 -216708239 - MER65C LTR ERV1 0 461 1 472 345 49 40 chr2 36548344 36549093 -216707490 - MER65C-int LTR ERV1 0 6685 4209 10464 53 13 56 chr2 36549098 36550519 -216706064 + SVA Other Other 27 1386 0 2187 126 35 13 chr2 36651802 36652174 -216604409 + THE1C-int LTR MaLR 1201 1580 0 1883 118 76 25 chr2 36652174 36652531 -216604052 + THE1C LTR MaLR 1 375 0 32 86 0 0 chr2 36652956 36653037 -216603546 + AT_rich Low_complexity Low_complexity 1 81 0 23 33 0 0 chr2 36653373 36653403 -216603180 + AT_rich Low_complexity Low_complexity 1 30 0 650 233 32 42 chr2 36653547 36653830 -216602753 - L1MC5 LINE L1 -35 7926 7647 195 258 76 0 chr2 36653838 36653904 -216602679 + MIR SINE MIR 105 175 -87 23 33 0 0 chr2 36654028 36654058 -216602525 + AT_rich Low_complexity Low_complexity 1 30 0 1142 166 47 32 chr2 36654393 36654646 -216601937 - Tigger2 DNA MER2_type -10 2708 2452 3849 141 9 20 chr2 36654737 36655383 -216601200 - Tigger2 DNA MER2_type -1974 744 106 226 167 83 0 chr2 36656138 36656186 -216600397 - MER53 DNA DNA -136 53 2 787 307 56 0 chr2 36656188 36656419 -216600164 - L2 LINE L2 -1956 1358 1115 21 82 0 0 chr2 36656460 36656509 -216600074 + AT_rich Low_complexity Low_complexity 1 49 0 1624 173 60 33 chr2 36656855 36657220 -216599363 - THE1C LTR MaLR 0 375 1 33 0 0 0 chr2 36657451 36657484 -216599099 + AT_rich Low_complexity Low_complexity 1 33 0 469 218 11 22 chr2 36658732 36658911 -216597672 + CT-rich Low_complexity Low_complexity 2 178 0 25211 33 2 1 chr2 36659254 36663635 -216592948 - L1PA4 LINE L1 -21 6134 1749 3155 175 9 22 chr2 36663917 36664558 -216592025 + L1MA3 LINE L1 5453 6085 -220 2560 128 53 5 chr2 36664558 36664972 -216591611 + MER61C LTR ERV1 1 434 0 633 178 0 160 chr2 36664972 36665191 -216591392 + MER61C-int LTR ERV1 2 185 -5032 1107 166 6 131 chr2 36665237 36665550 -216591033 + MER61C-int LTR ERV1 181 454 -4763 19136 138 52 48 chr2 36665562 36666179 -216590404 + MER61C-int LTR ERV1 407 1020 -4197 2445 86 0 0 chr2 36666179 36666483 -216590100 - AluY SINE Alu -7 304 1 19136 138 52 48 chr2 36666483 36666656 -216589927 + MER61C-int LTR ERV1 1020 1191 -4026 2284 99 3 0 chr2 36666656 36666960 -216589623 - AluY SINE Alu -6 305 1 19136 138 52 48 chr2 36666960 36670580 -216586003 + MER61C-int LTR ERV1 1191 5217 0 1944 128 16 10 chr2 36670580 36670884 -216585699 + MER61C LTR ERV1 1 306 -128 2005 117 0 4 chr2 36670886 36671194 -216585389 - AluSg SINE Alu 0 307 1 610 316 89 31 chr2 36671462 36671943 -216584640 - L1M4 LINE L1 -1146 5236 4728 1145 203 50 10 chr2 36672058 36672358 -216584225 - MER33 DNA MER1_type -8 316 5 3233 190 21 24 chr2 36672522 36672952 -216583631 + LTR58 LTR ERV1 2 431 -248 1874 144 149 8 chr2 36672952 36673327 -216583256 - MSTA LTR MaLR 0 428 1 3233 190 21 24 chr2 36673327 36673574 -216583009 + LTR58 LTR ERV1 431 677 -2 348 341 29 22 chr2 36673591 36673864 -216582719 - L1MDa LINE L1 -3443 2939 2665 1870 143 4 4 chr2 36673880 36674160 -216582423 - AluSx SINE Alu -32 280 1 26 0 0 0 chr2 36674180 36674206 -216582377 + AT_rich Low_complexity Low_complexity 1 26 0 541 347 89 0 chr2 36674215 36674440 -216582143 + MIR SINE MIR 18 262 0 413 316 37 38 chr2 36674524 36674818 -216581765 - L1MDa LINE L1 -3739 2647 2381 378 263 55 67 chr2 36674816 36675046 -216581537 - L1MDa LINE L1 -4663 1719 1436 * 1701 158 76 20 chr2 36675201 36675555 -216581028 + THE1C LTR MaLR 1 374 -1 5211 179 43 54 chr2 36675556 36676824 -216579759 + THE1C-int LTR MaLR 1 1254 -326 9980 180 110 103 chr2 36676958 36681034 -216575549 - L1 LINE L1 -1516 6049 2003 1785 131 158 75 chr2 36681034 36681407 -216575176 - MER4A LTR ERV1 0 664 261 547 172 0 10 chr2 36681407 36681506 -216575077 - MER4A LTR ERV1 -566 98 1 9980 180 110 103 chr2 36681506 36682283 -216574300 - L1 LINE L1 -5562 2003 1233 2122 180 28 51 chr2 36682283 36682755 -216573828 - LOR1b LTR ERV1 0 461 1 9980 180 110 103 chr2 36682755 36683422 -216573161 - L1 LINE L1 -6332 1233 15 5818 30 3 0 chr2 36683975 36685186 -216571397 - L1PA4 LINE L1 -211 5944 4732 2524 33 0 0 chr2 36685186 36685483 -216571100 + L1PA4 LINE L1 5852 6152 -3 23 33 0 0 chr2 36685483 36685513 -216571070 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 36685547 36685568 -216571015 + AT_rich Low_complexity Low_complexity 1 21 0 1284 226 98 11 chr2 36685796 36685951 -216570632 + L1MB7 LINE L1 5652 5792 -386 2121 100 7 0 chr2 36685951 36686230 -216570353 - AluY SINE Alu -16 295 15 1284 226 98 11 chr2 36686230 36686549 -216570034 + L1MB7 LINE L1 5792 6177 -1 269 172 16 0 chr2 36686555 36686619 -216569964 + (TA)n Simple_repeat Simple_repeat 1 65 0 201 39 0 0 chr2 36686627 36686653 -216569930 + (CA)n Simple_repeat Simple_repeat 1 26 0 204 355 30 41 chr2 36687178 36687347 -216569236 - MER5A DNA MER1_type -22 167 1 2188 107 0 10 chr2 36688095 36688394 -216568189 + AluSc SINE Alu 1 296 -13 282 343 0 0 chr2 36688451 36688550 -216568033 + (TATATG)n Simple_repeat Simple_repeat 3 101 0 1676 244 38 34 chr2 36689288 36689785 -216566798 + MLT1D LTR MaLR 1 499 -6 231 329 0 0 chr2 36690215 36690288 -216566295 + L2 LINE L2 3199 3271 -1 24 32 0 0 chr2 36690732 36690763 -216565820 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr2 36691869 36691897 -216564686 + AT_rich Low_complexity Low_complexity 1 28 0 1141 290 34 3 chr2 36692024 36692317 -216564266 + MER45B DNA AcHobo 4 305 -735 1827 169 0 31 chr2 36693148 36693467 -216563116 - AluJb SINE Alu -3 309 1 23 54 0 0 chr2 36693481 36693518 -216563065 + AT_rich Low_complexity Low_complexity 1 37 0 851 67 8 0 chr2 36693704 36693823 -216562760 + (TTCC)n Simple_repeat Simple_repeat 3 122 0 270 129 290 0 chr2 36694255 36694317 -216562266 - MADE1 DNA Mariner 0 80 1 4315 208 49 22 chr2 36694319 36695037 -216561546 + L1MA7 LINE L1 5041 5803 -488 1203 210 83 28 chr2 36695037 36695361 -216561222 - MER2 DNA MER2_type -1 343 2 4315 208 49 22 chr2 36695361 36695852 -216560731 + L1MA7 LINE L1 5803 6279 -12 1777 296 86 37 chr2 36698758 36699756 -216556827 - L2 LINE L2 -25 3288 2232 508 285 154 14 chr2 36699763 36699984 -216556599 - L2 LINE L2 -1704 1610 1359 21 36 0 0 chr2 36700278 36700306 -216556277 + AT_rich Low_complexity Low_complexity 1 28 0 13563 63 7 2 chr2 36702408 36704144 -216552439 - L1P LINE L1 -4401 1745 1 738 155 0 0 chr2 36704144 36704260 -216552323 - Tigger2 DNA MER2_type -2602 116 1 604 144 19 0 chr2 36704260 36704364 -216552219 - L1MA5 LINE L1 -23 6979 6874 776 158 24 0 chr2 36704365 36704492 -216552091 + FLAM_C SINE Alu 1 130 -13 12223 216 62 31 chr2 36704496 36711145 -216545438 - L1MA5 LINE L1 -126 6876 11 2019 131 3 0 chr2 36711235 36711525 -216545058 - AluSx SINE Alu -2 310 20 203 211 19 0 chr2 36711644 36711696 -216544887 + (TAAA)n Simple_repeat Simple_repeat 3 55 0 306 258 0 43 chr2 36711933 36712026 -216544557 - L1MC4 LINE L1 -1340 6702 6614 934 230 16 0 chr2 36714213 36714400 -216542183 - LTR16A LTR ERVL -9 441 252 2745 172 14 8 chr2 36714527 36715021 -216541562 - LOR1a LTR ERV1 0 497 1 282 383 51 16 chr2 36715179 36715432 -216541151 + L2 LINE L2 2435 2696 -618 2103 121 7 0 chr2 36715568 36715857 -216540726 - AluSx SINE Alu -19 293 3 25 51 0 0 chr2 36716273 36716312 -216540271 + AT_rich Low_complexity Low_complexity 1 39 0 287 260 57 113 chr2 36716438 36716792 -216539791 - L1ME4a LINE L1 -82 6039 5706 250 213 45 45 chr2 36717068 36717223 -216539360 + (TATAA)n Simple_repeat Simple_repeat 4 158 0 594 284 71 43 chr2 36717804 36718058 -216538525 - MIR SINE MIR 0 262 2 26 30 0 0 chr2 36718759 36718792 -216537791 + AT_rich Low_complexity Low_complexity 1 33 0 7032 143 15 21 chr2 36718878 36718912 -216537671 - MER66-int LTR ERV1 0 6676 6643 1788 179 0 7 chr2 36718912 36719213 -216537370 - AluSx SINE Alu -13 299 1 7032 143 15 21 chr2 36719213 36719639 -216536944 - MER66-int LTR ERV1 -33 6643 6216 1954 125 0 76 chr2 36719639 36719967 -216536616 - AluSx SINE Alu -9 303 1 7032 143 15 21 chr2 36719967 36720625 -216535958 - MER66-int LTR ERV1 -460 6216 5564 9987 187 20 50 chr2 36720666 36722804 -216533779 - MER66-int LTR ERV1 -2268 4408 2336 2530 189 31 9 chr2 36722792 36723526 -216533057 - MER66-int LTR ERV1 -4507 2169 1384 * 36 40 0 0 chr2 36724269 36724319 -216532264 + AT_rich Low_complexity Low_complexity 1 50 0 987 207 70 25 chr2 36726322 36726468 -216530115 + MER33 DNA MER1_type 5 143 -2442 2738 3 0 3 chr2 36726468 36726771 -216529812 + AluYa5 SINE Alu 1 302 -9 987 207 70 25 chr2 36726771 36726909 -216529674 + MER33 DNA MER1_type 143 302 -22 260 267 78 52 chr2 36726949 36727065 -216529518 + L2 LINE L2 3193 3311 -2 3766 196 31 40 chr2 36727998 36728923 -216527660 + L1MC3 LINE L1 6860 7776 -9 183 42 0 0 chr2 36728923 36728947 -216527636 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 715 177 8 8 chr2 36728947 36729077 -216527506 - FRAM SINE Alu -30 146 17 827 113 24 0 chr2 36729108 36729253 -216527330 - FLAM_C SINE Alu 0 164 17 2489 147 94 2 chr2 36730331 36730786 -216525797 - LOR1a LTR ERV1 0 497 1 26 0 0 0 chr2 36731958 36731984 -216524599 + AT_rich Low_complexity Low_complexity 1 26 0 2243 43 11 0 chr2 36731984 36732262 -216524321 - L1PA5 LINE L1 -7 6147 5867 252 125 50 0 chr2 36732262 36732302 -216524281 + L1P5 LINE L1 5680 5721 -430 7249 181 49 78 chr2 36733315 36735122 -216521461 + MER52A LTR ERV1 1 1755 0 974 249 75 19 chr2 36736921 36737242 -216519341 + MER2 DNA MER2_type 2 340 -4 736 104 64 8 chr2 36737470 36737595 -216518988 - AluSp/q SINE Alu -2 311 180 237 337 143 0 chr2 36737640 36737738 -216518845 + MIR3 SINE MIR 89 200 -8 22 35 0 0 chr2 36737808 36737837 -216518746 + AT_rich Low_complexity Low_complexity 1 29 0 2009 152 0 0 chr2 36737842 36738151 -216518432 + AluSx SINE Alu 1 309 -3 2243 62 0 7 chr2 36738410 36738683 -216517900 - AluY SINE Alu -20 291 21 209 371 21 0 chr2 36739970 36740110 -216516473 + L2 LINE L2 2644 2786 -528 265 304 101 19 chr2 36740369 36740527 -216516056 + MLT1I LTR MaLR 39 209 -200 251 143 0 0 chr2 36742008 36742043 -216514540 + Alu SINE Alu 2 36 -266 1226 91 81 16 chr2 36742046 36742232 -216514351 + AluSg/x SINE Alu 107 304 -8 324 238 0 48 chr2 36743512 36743596 -216512987 + L1MC4 LINE L1 6624 6703 -1339 613 278 117 68 chr2 36743672 36744126 -216512457 + MLT1H LTR MaLR 62 537 -12 2068 112 7 0 chr2 36744460 36744747 -216511836 + AluSq SINE Alu 1 289 -24 383 244 104 0 chr2 36744870 36745005 -216511578 - MER20B DNA MER1_type -41 742 594 644 249 68 42 chr2 36745133 36745370 -216511213 - MER20B DNA MER1_type -416 367 125 817 294 89 23 chr2 36745678 36746161 -216510422 - HAL1 LINE L1 -335 2172 1658 290 380 97 8 chr2 36746474 36746711 -216509872 - HAL1 LINE L1 -1926 581 324 1771 166 0 3 chr2 36747115 36747399 -216509184 + AluSx SINE Alu 3 285 -27 838 282 86 67 chr2 36747982 36749278 -216507305 - L1M4 LINE L1 -2159 3987 2668 923 226 26 34 chr2 36749321 36749587 -216506996 - L1MC3 LINE L1 -163 7622 7359 819 346 61 66 chr2 36749592 36751045 -216505538 - L1MEc LINE L1 -958 5424 3980 5766 221 41 79 chr2 36751095 36752822 -216503761 - L1 LINE L1 -1510 4636 2976 23 54 0 0 chr2 36752982 36753019 -216503564 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr2 36753051 36753072 -216503511 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 36753202 36753227 -216503356 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr2 36753267 36753292 -216503291 + AT_rich Low_complexity Low_complexity 1 25 0 194 156 22 0 chr2 36753335 36753380 -216503203 + CT-rich Low_complexity Low_complexity 1 46 0 394 287 139 43 chr2 36753409 36754314 -216502269 - L1MEc LINE L1 -2914 3468 2477 420 300 137 23 chr2 36754385 36754728 -216501855 - L1MEc LINE L1 -4109 2454 2073 504 297 75 65 chr2 36754744 36755378 -216501205 - L1MEc LINE L1 -4443 1939 1173 216 149 0 0 chr2 36756086 36756133 -216500450 + (CAAAAA)n Simple_repeat Simple_repeat 4 50 0 324 0 0 0 chr2 36759359 36759395 -216497188 + (TG)n Simple_repeat Simple_repeat 2 37 0 888 194 68 10 chr2 36760647 36760853 -216495730 + MER20 DNA MER1_type 1 218 -1 553 252 49 0 chr2 36760905 36761048 -216495535 + L2 LINE L2 3164 3313 0 1073 184 67 79 chr2 36761238 36761553 -216495030 - L1MA9 LINE L1 -38 6274 5964 1268 143 23 19 chr2 36761553 36761769 -216494814 - Tigger3b DNA MER2_type -741 490 274 587 188 10 0 chr2 36761767 36761868 -216494715 - Tigger3b DNA MER2_type -1129 102 1 * 279 89 22 0 chr2 36761917 36761962 -216494621 - MADE1 DNA Mariner 0 80 35 332 121 0 52 chr2 36762269 36762327 -216494256 + MLT1A1 LTR MaLR 1 55 -412 * 971 178 37 11 chr2 36762323 36762514 -216494069 + MLT1A1 LTR MaLR 170 365 0 564 292 97 84 chr2 36762521 36763117 -216493466 - HAL1b LINE L1 -650 698 95 180 77 0 0 chr2 36763706 36763732 -216492851 + (CAAAG)n Simple_repeat Simple_repeat 1 26 0 251 227 0 68 chr2 36763793 36763881 -216492702 - L1MC/D LINE L1 -1926 5882 5801 21 0 0 0 chr2 36764611 36764632 -216491951 + AT_rich Low_complexity Low_complexity 1 21 0 2186 128 0 0 chr2 36764660 36764965 -216491618 - AluSx SINE Alu -7 305 1 1384 167 9 66 chr2 36765391 36765709 -216490874 - AluJo SINE Alu -12 300 1 405 397 15 15 chr2 36767121 36767320 -216489263 + MIR SINE MIR 20 218 -44 2220 105 12 6 chr2 36767362 36767705 -216488878 - THE1C-int LTR MaLR -1233 347 3 2550 48 0 10 chr2 36767724 36768037 -216488546 - AluY SINE Alu -1 310 1 931 106 8 0 chr2 36768037 36768169 -216488414 - THE1C LTR MaLR -6 369 237 2244 101 0 0 chr2 36768679 36768977 -216487606 + AluSc SINE Alu 1 298 -11 250 225 175 58 chr2 36769466 36769586 -216486997 - MER5A DNA MER1_type -1 188 55 1709 141 0 57 chr2 36772601 36772756 -216483827 - AluSx SINE Alu -30 282 151 2193 110 0 10 chr2 36772756 36773056 -216483527 - AluSx SINE Alu -15 297 1 1709 141 0 57 chr2 36773056 36773199 -216483384 - AluSx SINE Alu -161 151 1 2313 78 0 31 chr2 36773432 36773751 -216482832 - AluY SINE Alu 0 311 3 355 274 49 10 chr2 36774288 36774390 -216482193 - MIR SINE MIR -50 212 107 23 33 0 0 chr2 36774406 36774436 -216482147 + AT_rich Low_complexity Low_complexity 1 30 0 228 153 51 0 chr2 36774609 36774668 -216481915 + (TA)n Simple_repeat Simple_repeat 1 62 0 490 297 26 0 chr2 36774681 36774836 -216481747 - LTR16A LTR ERVL -9 441 283 25 51 0 0 chr2 36775732 36775771 -216480812 + AT_rich Low_complexity Low_complexity 1 39 0 275 301 41 49 chr2 36776714 36776837 -216479746 + MIR SINE MIR 1 122 -140 620 275 42 5 chr2 36776896 36777085 -216479498 + L2 LINE L2 3107 3302 -11 236 288 234 5 chr2 36777180 36777364 -216479219 + MIR SINE MIR 36 261 -1 21 89 0 0 chr2 36778083 36778139 -216478444 + AT_rich Low_complexity Low_complexity 1 56 0 23 0 0 0 chr2 36778341 36778364 -216478219 + AT_rich Low_complexity Low_complexity 1 23 0 1052 316 76 8 chr2 36778377 36778773 -216477810 - LTR16A LTR ERVL -9 441 19 943 272 13 8 chr2 36779340 36779575 -216477008 + LTR16A LTR ERVL 204 439 -11 1468 334 59 32 chr2 36780119 36780937 -216475646 + HERV16 LTR ERVL 734 1573 -3423 954 189 37 65 chr2 36780961 36781178 -216475405 + MER20 DNA MER1_type 1 211 -8 977 281 93 70 chr2 36781204 36781744 -216474839 + HERV16 LTR ERVL 1659 2210 -2786 3587 270 110 36 chr2 36781989 36783589 -216472994 + L1ME LINE L1 254 1733 -4347 1048 228 29 63 chr2 36783589 36783967 -216472616 - MLT1A1 LTR MaLR 0 365 1 3587 270 110 36 chr2 36783967 36785516 -216471067 + L1ME LINE L1 1733 3165 -2915 2224 96 0 3 chr2 36785516 36785808 -216470775 - AluSg1 SINE Alu -18 291 1 3587 270 110 36 chr2 36785808 36786537 -216470046 + L1ME LINE L1 3165 4418 -1662 1967 151 3 0 chr2 36786537 36786842 -216469741 + AluSx SINE Alu 1 306 -6 3587 270 110 36 chr2 36786842 36786919 -216469664 + L1ME LINE L1 4418 4488 -1592 744 199 75 70 chr2 36786921 36787107 -216469476 + MLT2B1 LTR ERVL 150 336 -184 1594 281 64 12 chr2 36787107 36788354 -216468229 + L1ME LINE L1 4757 6094 -10 1638 322 55 45 chr2 36788386 36789515 -216467068 + HERV16 LTR ERVL 2268 3076 -1920 6609 174 31 26 chr2 36789750 36791137 -216465446 - Ricksha DNA DNA -11 3235 1882 587 162 0 18 chr2 36791135 36791246 -216465337 - Ricksha DNA DNA -1936 110 2 * 1913 157 6 10 chr2 36791319 36791632 -216464951 + AluSx SINE Alu 1 312 0 827 318 68 23 chr2 36793054 36793453 -216463130 + LTR16A LTR ERVL 12 428 -22 346 273 123 45 chr2 36793486 36793640 -216462943 + L1MEd LINE L1 594 759 -5360 733 242 79 44 chr2 36793649 36794054 -216462529 + L1MEd LINE L1 791 1209 -4910 21 0 0 0 chr2 36794089 36794110 -216462473 + AT_rich Low_complexity Low_complexity 1 21 0 245 250 29 0 chr2 36794223 36794291 -216462292 + L1MEd LINE L1 1293 1362 -4767 1225 181 28 113 chr2 36794470 36794869 -216461714 - MLT1A1 LTR MaLR 0 365 1 206 179 60 0 chr2 36795933 36796000 -216460583 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 2298 97 0 0 chr2 36796391 36796699 -216459884 + AluSg SINE Alu 1 308 -2 1983 175 86 2 chr2 36797597 36797992 -216458591 - MSTB1 LTR MaLR -4 428 1 2272 99 3 3 chr2 36798373 36798686 -216457897 + AluSp SINE Alu 1 313 0 316 0 45 0 chr2 36800300 36800344 -216456239 + (TG)n Simple_repeat Simple_repeat 1 46 0 180 0 0 0 chr2 36800343 36800363 -216456220 + (GA)n Simple_repeat Simple_repeat 1 20 0 * 537 250 54 14 chr2 36800608 36800756 -216455827 + L2 LINE L2 3160 3313 0 252 396 0 0 chr2 36800776 36800867 -216455716 + L2 LINE L2 3162 3252 -20 270 284 14 0 chr2 36801086 36801160 -216455423 - MIR SINE MIR -14 248 174 2310 113 8 41 chr2 36801165 36801553 -216455030 + THE1C LTR MaLR 1 375 0 446 274 57 8 chr2 36801564 36801688 -216454895 - MIR SINE MIR -110 152 23 443 208 0 40 chr2 36801732 36801833 -216454750 - MER2 DNA MER2_type -248 97 1 319 286 146 11 chr2 36802076 36802254 -216454329 + MIR SINE MIR 60 261 -1 3446 187 31 42 chr2 36802387 36802607 -216453976 - MER44D DNA MER2_type -1889 598 377 2328 142 53 5 chr2 36802607 36803023 -216453560 - L1PA16 LINE L1 -11 6155 5720 3446 187 31 42 chr2 36803023 36803535 -216453048 - MER44D DNA MER2_type -2110 377 2 202 377 9 44 chr2 36803743 36803857 -216452726 - MIR SINE MIR -83 125 16 840 169 0 0 chr2 36804056 36804204 -216452379 - L1MA3 LINE L1 0 7724 7577 1810 172 49 58 chr2 36804204 36804755 -216451828 - MLT2A2 LTR ERVL 0 554 1 12363 168 38 53 chr2 36804755 36804974 -216451609 - L1MA3 LINE L1 -143 7581 7360 3746 42 0 0 chr2 36804974 36805428 -216451155 - L1PA4 LINE L1 0 6155 5702 12363 168 38 53 chr2 36805428 36807642 -216448941 - L1MA3 LINE L1 -364 7360 5114 234 0 0 0 chr2 36807642 36807668 -216448915 + (TTA)n Simple_repeat Simple_repeat 2 27 0 12363 168 38 53 chr2 36807668 36808806 -216447777 - L1MA3 LINE L1 -2610 5114 3960 2340 103 3 0 chr2 36808806 36809117 -216447466 - AluSx SINE Alu 0 312 1 12363 168 38 53 chr2 36809117 36810152 -216446431 - L1MA3 LINE L1 -3764 3960 3082 1985 127 24 63 chr2 36810152 36810531 -216446052 - THE1B LTR MaLR 0 364 1 12363 168 38 53 chr2 36810531 36811701 -216444882 - L1MA3 LINE L1 -4642 3082 1896 2488 217 2 14 chr2 36811694 36812205 -216444378 - L1MA3 LINE L1 -7048 517 13 * 2148 236 63 22 chr2 36812535 36813111 -216443472 - L1M4 LINE L1 -1870 4276 3672 1529 278 41 8 chr2 36813111 36813597 -216442986 - MLT1D LTR MaLR 0 505 4 2148 236 63 22 chr2 36813597 36813643 -216442940 - L1M4 LINE L1 -2474 3672 3629 647 234 31 26 chr2 36813644 36813836 -216442747 + L1MB8 LINE L1 5985 6177 -1 26 30 0 0 chr2 36814068 36814101 -216442482 + AT_rich Low_complexity Low_complexity 1 33 0 184 333 132 65 chr2 36814365 36815129 -216441454 - L2 LINE L2 -423 2891 2077 45 45 0 0 chr2 36815133 36815199 -216441384 + AT_rich Low_complexity Low_complexity 1 66 0 308 333 48 48 chr2 36815674 36815863 -216440720 + L1ME LINE L1 4 192 -5878 211 213 21 0 chr2 36816002 36816049 -216440534 + MIR SINE MIR 162 209 -53 2083 117 3 3 chr2 36817353 36817661 -216438922 + AluSc SINE Alu 1 308 -1 387 41 0 0 chr2 36819369 36819418 -216437165 + (TG)n Simple_repeat Simple_repeat 2 50 0 190 260 0 96 chr2 36819798 36819871 -216436712 + MER5A DNA MER1_type 124 189 0 799 277 47 16 chr2 36820694 36820947 -216435636 - MIR SINE MIR 0 262 2 276 332 58 23 chr2 36821452 36821762 -216434821 - L1ME LINE L1 -286 5884 5564 25 0 0 0 chr2 36821982 36822007 -216434576 + AT_rich Low_complexity Low_complexity 1 25 0 625 344 80 35 chr2 36822162 36822903 -216433680 - L1ME LINE L1 -1301 4845 4072 245 214 0 100 chr2 36823354 36823424 -216433159 + MLT1F1 LTR MaLR 55 117 -450 1889 199 49 76 chr2 36823429 36824037 -216432546 + L1MD3 LINE L1 7402 7993 -2 188 111 28 0 chr2 36824571 36824607 -216431976 + GA-rich Low_complexity Low_complexity 4 40 0 319 293 16 0 chr2 36824958 36825081 -216431502 - L1MC5 LINE L1 -466 7495 7371 1035 188 132 91 chr2 36825093 36825439 -216431144 - L1MC5 LINE L1 -823 7138 6765 191 36 36 0 chr2 36825439 36825467 -216431116 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1035 188 132 91 chr2 36825467 36825605 -216430978 - L1MC5 LINE L1 -1196 6765 6634 784 281 102 61 chr2 36826198 36826803 -216429780 - L1MC5 LINE L1 -1883 5925 5296 1557 189 3 10 chr2 36826835 36827136 -216429447 - AluJo SINE Alu 0 312 14 994 232 99 0 chr2 36827227 36827499 -216429084 - MER58B DNA MER1_type 0 341 43 14197 189 18 4 chr2 36827526 36831544 -216425039 - L1MA3 LINE L1 0 7724 3649 2540 170 20 38 chr2 36831537 36832037 -216424546 - L1MA3 LINE L1 -7060 505 15 * 604 330 71 35 chr2 36832037 36832839 -216423744 - L1MC5 LINE L1 -1946 4200 3370 2371 163 9 32 chr2 36832949 36833385 -216423198 + MSTB LTR MaLR 1 426 0 21 36 0 0 chr2 36833748 36833776 -216422807 + AT_rich Low_complexity Low_complexity 1 28 0 37 23 0 0 chr2 36834898 36834942 -216421641 + AT_rich Low_complexity Low_complexity 1 44 0 265 264 204 30 chr2 36835376 36835577 -216421006 - HAL1b LINE L1 -733 615 380 31 44 0 0 chr2 36835681 36835726 -216420857 + AT_rich Low_complexity Low_complexity 1 45 0 212 215 62 0 chr2 36835780 36835845 -216420738 + (TAGA)n Simple_repeat Simple_repeat 1 69 0 24 32 0 0 chr2 36836232 36836263 -216420320 + AT_rich Low_complexity Low_complexity 1 31 0 210 143 0 48 chr2 36838286 36838328 -216418255 + (TAAAAA)n Simple_repeat Simple_repeat 1 40 0 1004 239 40 71 chr2 36838403 36838824 -216417759 + L1ME LINE L1 4997 5406 -835 2198 94 10 10 chr2 36838824 36839132 -216417451 + AluSq SINE Alu 2 309 -4 1004 239 40 71 chr2 36839132 36839223 -216417360 + L1ME LINE L1 5406 5498 -743 241 293 49 37 chr2 36840000 36840082 -216416501 + L2 LINE L2 3189 3271 -1 2754 22 0 0 chr2 36841351 36841665 -216414918 - AluYb8 SINE Alu -4 314 1 26 0 0 0 chr2 36842078 36842104 -216414479 + AT_rich Low_complexity Low_complexity 1 26 0 2057 120 0 10 chr2 36844060 36844359 -216412224 - AluSg SINE Alu -14 296 1 272 227 23 91 chr2 36844360 36844448 -216412135 + MIR SINE MIR 88 169 -93 22 0 0 0 chr2 36844476 36844498 -216412085 + AT_rich Low_complexity Low_complexity 1 22 0 2272 272 87 44 chr2 36844602 36844737 -216411846 - L1M4 LINE L1 -1820 4326 4198 312 27 0 0 chr2 36844737 36844774 -216411809 + (TG)n Simple_repeat Simple_repeat 2 38 0 1835 196 75 8 chr2 36844779 36845178 -216411405 - MSTB LTR MaLR 0 426 1 2272 272 87 44 chr2 36845178 36845644 -216410939 - L1M4 LINE L1 -1951 4195 3750 1849 147 40 0 chr2 36845644 36845943 -216410640 - AluSx SINE Alu -1 311 1 2272 272 87 44 chr2 36845943 36847186 -216409397 - L1M4 LINE L1 -2396 3750 2396 21 36 0 0 chr2 36847500 36847528 -216409055 + AT_rich Low_complexity Low_complexity 1 28 0 786 220 17 62 chr2 36847968 36848209 -216408374 - L1M4 LINE L1 -1244 4902 4673 1038 267 74 30 chr2 36848585 36848989 -216407594 - L1ME1 LINE L1 -5 6144 5723 920 248 44 35 chr2 36848984 36849526 -216407057 - L1ME1 LINE L1 -822 5307 4704 * 696 277 11 11 chr2 36849529 36849717 -216406866 + MER58A DNA MER1_type 37 224 0 38 22 0 0 chr2 36849808 36849853 -216406730 + AT_rich Low_complexity Low_complexity 1 45 0 338 317 116 39 chr2 36850010 36850294 -216406289 + L1ME LINE L1 5491 5796 -325 395 342 40 13 chr2 36851230 36851458 -216405125 - MIR SINE MIR -16 246 13 291 318 119 35 chr2 36852320 36853016 -216403567 + HAL1 LINE L1 947 1701 -806 1504 169 91 20 chr2 36853131 36853481 -216403102 + THE1C LTR MaLR 1 375 0 21 0 0 0 chr2 36853506 36853527 -216403056 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 36853874 36853902 -216402681 + AT_rich Low_complexity Low_complexity 1 28 0 347 202 20 130 chr2 36854152 36854398 -216402185 + HAL1b LINE L1 746 2350 -157 198 192 0 0 chr2 36854460 36854512 -216402071 + (TA)n Simple_repeat Simple_repeat 1 52 0 429 229 0 38 chr2 36854616 36854721 -216401862 - HsTC2 DNA Tc2 -1793 105 5 1570 254 62 81 chr2 36855668 36856395 -216400188 + L1M3e LINE L1 466 1178 -6311 3253 249 51 71 chr2 36856419 36857735 -216398848 + L1M3e LINE L1 2011 3289 -4276 300 53 0 0 chr2 36857735 36857773 -216398810 + (TG)n Simple_repeat Simple_repeat 1 38 0 3253 249 51 71 chr2 36857773 36858095 -216398488 + L1M3e LINE L1 3289 3616 -3949 985 292 144 7 chr2 36858150 36858831 -216397752 - L1ME1 LINE L1 -1745 4384 3611 602 244 36 36 chr2 36858850 36859018 -216397565 - FAM SINE Alu -17 168 1 260 244 77 0 chr2 36859064 36859142 -216397441 - L1ME1 LINE L1 -2590 3539 3456 1159 294 58 40 chr2 36860294 36861111 -216395472 - L1ME1 LINE L1 -3050 3079 2249 248 261 269 27 chr2 36861300 36861557 -216395026 - L1ME1 LINE L1 -4654 1656 1338 312 368 13 13 chr2 36861661 36861816 -216394767 - L1ME1 LINE L1 -4910 1209 1055 27 0 0 0 chr2 36862765 36862792 -216393791 + AT_rich Low_complexity Low_complexity 1 27 0 436 320 45 17 chr2 36863293 36863471 -216393112 + MIR SINE MIR 22 204 -58 209 157 0 39 chr2 36864129 36864180 -216392403 + A-rich Low_complexity Low_complexity 1 49 0 1720 150 43 40 chr2 36864802 36865176 -216391407 - THE1C LTR MaLR 0 375 1 183 230 70 50 chr2 36865182 36865282 -216391301 - MIR SINE MIR -10 252 151 229 397 26 0 chr2 36865534 36865612 -216390971 - L3 LINE CR1 -3 1574 1495 190 439 9 0 chr2 36866134 36866248 -216390335 - L2 LINE L2 -635 2679 2565 243 0 0 0 chr2 36866568 36866595 -216389988 + (CA)n Simple_repeat Simple_repeat 2 28 0 6083 174 24 26 chr2 36869017 36871957 -216384626 + L1PA11 LINE L1 10 2956 -3533 858 30 0 0 chr2 36871957 36872057 -216384526 + L1PA3 LINE L1 6052 6152 -3 6083 174 24 26 chr2 36872057 36875492 -216381091 + L1PA11 LINE L1 2956 6488 -1 400 232 0 0 chr2 36875580 36875649 -216380934 - Tigger2 DNA MER2_type -10 2708 2640 1304 156 128 12 chr2 36875649 36875935 -216380648 - AluSg1 SINE Alu 0 315 1 6703 156 44 14 chr2 36875935 36877128 -216379455 - Tigger2 DNA MER2_type -60 2658 1430 3471 160 26 14 chr2 36877122 36877771 -216378812 - Tigger2 DNA MER2_type -2057 661 5 * 1824 134 66 41 chr2 36878195 36878560 -216378023 + THE1C LTR MaLR 1 374 -1 227 281 44 44 chr2 36878615 36878729 -216377854 + L1MCa LINE L1 1080 1193 -5233 1537 230 13 10 chr2 36878763 36879067 -216377516 + L1MB8 LINE L1 8 312 -6547 * 3697 239 67 16 chr2 36879062 36880073 -216376510 + L1MB8 LINE L1 523 1585 -5274 568 264 48 50 chr2 36880071 36880453 -216376130 + L1PBa LINE L1 1593 1988 -4228 * 977 162 62 0 chr2 36880546 36880725 -216375858 - L1PB4 LINE L1 -3 6153 5964 6213 255 37 50 chr2 36880832 36882889 -216373694 + L1MB8 LINE L1 2618 4701 -2294 2072 90 36 7 chr2 36882889 36883166 -216373417 + AluY SINE Alu 1 285 -26 6213 255 37 50 chr2 36883166 36883396 -216373187 + L1MB8 LINE L1 4701 4933 -2062 348 83 0 0 chr2 36883396 36883444 -216373139 + (TAA)n Simple_repeat Simple_repeat 2 49 0 6213 255 37 50 chr2 36883444 36884163 -216372420 + L1MB8 LINE L1 4933 5660 -1335 11303 30 2 1 chr2 36884163 36886286 -216370297 + L1PA4 LINE L1 4028 6154 -1 6213 255 37 50 chr2 36886286 36886416 -216370167 + L1MB8 LINE L1 5660 5790 -1205 357 24 0 0 chr2 36886416 36886458 -216370125 + (TG)n Simple_repeat Simple_repeat 2 43 0 6213 255 37 50 chr2 36886458 36887513 -216369070 + L1MB8 LINE L1 5790 6619 -376 4837 110 13 7 chr2 36887530 36888284 -216368299 - L1MA1 LINE L1 0 7721 6963 862 159 0 0 chr2 36888285 36888417 -216368166 + AluJb SINE Alu 1 132 -180 14352 173 20 31 chr2 36888424 36889204 -216367379 - L1MA1 LINE L1 -745 6820 6033 2083 112 25 0 chr2 36889204 36889482 -216367101 + AluSx SINE Alu 1 285 -27 14352 173 20 31 chr2 36889482 36889637 -216366946 - L1MA1 LINE L1 -1532 6033 5878 192 40 0 0 chr2 36889637 36889662 -216366921 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 14352 173 20 31 chr2 36889662 36895050 -216361533 - L1MA1 LINE L1 -1687 5878 12 951 241 50 64 chr2 36895056 36895088 -216361495 + L1MB8 LINE L1 6614 6645 -344 13524 152 30 10 chr2 36895088 36897454 -216359129 + Tigger1 DNA MER2_type 4 2418 0 951 241 50 64 chr2 36897454 36897798 -216358785 + L1MB8 LINE L1 6645 6985 -4 2266 232 96 30 chr2 36897929 36899140 -216357443 + L1MCb LINE L1 832 2378 -4367 257 75 25 0 chr2 36899151 36899191 -216357392 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 2629 247 48 22 chr2 36899198 36900189 -216356394 + L1MCb LINE L1 2540 3519 -3045 593 301 63 3 chr2 36900223 36900572 -216356011 + L1MCb LINE L1 4699 5068 -1496 34 0 0 0 chr2 36900595 36900629 -216355954 + AT_rich Low_complexity Low_complexity 1 34 0 209 200 0 0 chr2 36900711 36900756 -216355827 + (TATATG)n Simple_repeat Simple_repeat 3 47 0 252 185 0 0 chr2 36901069 36901123 -216355460 + GA-rich Low_complexity Low_complexity 3 56 0 868 181 57 76 chr2 36901173 36901383 -216355200 - MER2 DNA MER2_type -139 206 1 38355 54 52 1 chr2 36901593 36907441 -216349142 + L1PA4 LINE L1 1 6155 0 794 263 21 29 chr2 36907518 36907588 -216348995 + MLT1E1 LTR MaLR 417 486 -168 2040 143 0 7 chr2 36907588 36907888 -216348695 + AluSx SINE Alu 1 298 -14 794 263 21 29 chr2 36907888 36908057 -216348526 + MLT1E1 LTR MaLR 486 654 0 232 315 0 0 chr2 36908735 36908789 -216347794 + L2 LINE L2 3209 3262 -10 24 77 0 0 chr2 36909915 36909967 -216346616 + AT_rich Low_complexity Low_complexity 1 52 0 203 283 11 65 chr2 36910732 36910824 -216345759 - L2 LINE L2 -810 2504 2418 258 258 0 0 chr2 36912041 36912103 -216344480 - MLT1J2 LTR MaLR -28 422 361 21 36 0 0 chr2 36912659 36912687 -216343896 + AT_rich Low_complexity Low_complexity 1 28 0 278 348 14 13 chr2 36913941 36914066 -216342517 + MIR SINE MIR 22 146 -62 2486 81 41 9 chr2 36915292 36915636 -216340947 + THE1A LTR MaLR 1 355 0 10954 98 4 7 chr2 36915636 36917215 -216339368 + THE1A-int LTR MaLR 1 1574 -6 2521 82 29 3 chr2 36917220 36917563 -216339020 + THE1A LTR MaLR 1 352 -3 391 293 104 73 chr2 36918879 36919292 -216337291 + LTR33 LTR ERVL 1 426 -95 1303 258 104 43 chr2 36919294 36919833 -216336750 + MLT1G LTR MaLR 1 572 -18 297 240 0 13 chr2 36919850 36919925 -216336658 + LTR33 LTR ERVL 424 497 -24 214 136 0 119 chr2 36920898 36920957 -216335626 + L2 LINE L2 3221 3272 0 2223 131 39 45 chr2 36922894 36923253 -216333330 + LTR18A LTR ERVL 1 357 0 1441 181 3 34 chr2 36923277 36923570 -216333013 + HERVL18 LTR ERVL 95 378 -5669 * 1594 190 10 7 chr2 36923569 36924074 -216332509 + HERVL18 LTR ERVL 1241 1810 -4237 1294 133 22 2 chr2 36924073 36924341 -216332242 + HERVL18 LTR ERVL 2119 2452 -3595 * 4881 167 2 25 chr2 36924340 36925219 -216331364 + HERVL18 LTR ERVL 2720 3578 -2469 613 128 11 0 chr2 36925222 36925316 -216331267 + HERVL18 LTR ERVL 4394 4488 -1559 2294 126 22 44 chr2 36925584 36925949 -216330634 + LTR18A LTR ERVL 1 357 0 1406 114 22 13 chr2 36926385 36926613 -216329970 + MER50 LTR ERV1 3 232 -502 1342 133 13 94 chr2 36926615 36926924 -216329659 + MER50 LTR ERV1 435 718 -16 432 0 0 0 chr2 36926924 36926972 -216329611 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 210 71 0 0 chr2 36926973 36927001 -216329582 + (CATA)n Simple_repeat Simple_repeat 1 28 0 856 266 149 0 chr2 36927315 36927597 -216328986 - MLT1G1 LTR MaLR -5 590 267 927 314 93 20 chr2 36928836 36929423 -216327160 + L2 LINE L2 2606 3312 -1 220 171 0 0 chr2 36930456 36930497 -216326086 + MIR3 SINE MIR 168 208 0 330 324 70 38 chr2 36933380 36933565 -216323018 + MIR SINE MIR 2 192 -70 204 111 0 0 chr2 36934662 36934698 -216321885 + (CAA)n Simple_repeat Simple_repeat 2 37 0 2136 143 7 0 chr2 36934704 36935011 -216321572 + AluSx SINE Alu 2 310 -2 2711 19 0 0 chr2 36935096 36935416 -216321167 - L1PA4 LINE L1 -383 5772 5453 3200 33 5 8 chr2 36935416 36935804 -216320779 + L1PA4 LINE L1 5762 6155 0 190 278 56 0 chr2 36935805 36935859 -216320724 + MER5A DNA MER1_type 61 117 -72 368 241 108 32 chr2 36936592 36936750 -216319833 + LTR33A LTR ERVL 61 230 -293 245 343 97 0 chr2 36937160 36937338 -216319245 - MIR3 SINE MIR -7 201 3 249 410 0 0 chr2 36938003 36938086 -216318497 + MIR SINE MIR 4 86 -176 310 128 0 0 chr2 36938416 36938463 -216318120 + L1PBa LINE L1 1109 1155 -5708 9364 207 27 10 chr2 36938469 36942165 -216314418 + L1PBa LINE L1 1311 5090 -1772 1245 239 56 54 chr2 36942322 36942786 -216313797 - MLT1C LTR MaLR 0 467 3 266 229 99 30 chr2 36942790 36942921 -216313662 - MLT1J LTR MaLR -345 166 27 251 302 0 0 chr2 36942968 36943031 -216313552 + L2 LINE L2 3251 3313 0 474 352 72 7 chr2 36943353 36943660 -216312923 + MER102b DNA MER1_type 1 327 -14 25 0 0 0 chr2 36943771 36943796 -216312787 + AT_rich Low_complexity Low_complexity 1 25 0 4975 310 108 34 chr2 36943982 36944862 -216311721 - L2 LINE L2 -7 3306 2493 2134 211 54 16 chr2 36944862 36945360 -216311223 - MLT2B1 LTR ERVL 0 520 4 4975 310 108 34 chr2 36945360 36946769 -216309814 - L2 LINE L2 -820 2493 732 1721 180 10 13 chr2 36946769 36947069 -216309514 - AluJo SINE Alu -13 299 1 4975 310 108 34 chr2 36947069 36947737 -216308846 - L2 LINE L2 -2581 732 115 704 234 136 8 chr2 36947882 36948117 -216308466 + MER96B DNA MER1_type? 145 409 -8 388 228 0 41 chr2 36948535 36948658 -216307925 + L2 LINE L2 2328 2445 -869 1693 169 60 41 chr2 36949514 36949882 -216306701 + THE1C LTR MaLR 1 375 0 354 115 0 0 chr2 36949966 36950027 -216306556 + (CA)n Simple_repeat Simple_repeat 2 62 0 1100 172 199 0 chr2 36950456 36950717 -216305866 + MER47A DNA MER2_type 53 365 -1 2210 116 17 9 chr2 36954564 36954910 -216301673 + L1PA11 LINE L1 5825 6173 -1 374 232 0 0 chr2 36954998 36955067 -216301516 - Tigger2 DNA MER2_type -10 2708 2640 1313 156 128 12 chr2 36955067 36955353 -216301230 - AluSg1 SINE Alu 0 315 1 6310 156 45 14 chr2 36955353 36956542 -216300041 - Tigger2 DNA MER2_type -60 2658 1433 3272 160 26 14 chr2 36956540 36957189 -216299394 - Tigger2 DNA MER2_type -2057 661 5 * 1827 134 66 41 chr2 36957613 36957978 -216298605 + THE1C LTR MaLR 1 374 -1 354 340 31 12 chr2 36957985 36958147 -216298436 + L1MCa LINE L1 1029 1193 -5233 1438 230 13 10 chr2 36958181 36958485 -216298098 + L1M4b LINE L1 8 312 -6547 * 3385 242 66 15 chr2 36958480 36959491 -216297092 + L1M4b LINE L1 523 1585 -5274 484 256 44 51 chr2 36959489 36959865 -216296718 + L1PBa LINE L1 1593 1953 -4263 * 975 162 62 0 chr2 36959964 36960143 -216296440 - L1PB4 LINE L1 -3 6153 5964 5645 261 33 41 chr2 36960250 36962307 -216294276 + L1M4b LINE L1 2618 4690 -2267 2081 90 36 7 chr2 36962307 36962584 -216293999 + AluY SINE Alu 1 285 -26 5645 261 33 41 chr2 36962584 36962814 -216293769 + L1M4b LINE L1 4690 4920 -2037 369 62 0 0 chr2 36962814 36962862 -216293721 + (TAA)n Simple_repeat Simple_repeat 2 49 0 5645 261 33 41 chr2 36962862 36963432 -216293151 + L1M4b LINE L1 4920 5414 -1543 412 259 54 7 chr2 36963436 36963583 -216293000 + L1M4 LINE L1 5327 5480 -1477 * 10835 33 3 0 chr2 36963581 36965566 -216291017 + L1PA5 LINE L1 4028 6017 -137 597 236 11 22 chr2 36965567 36965749 -216290834 - L1M4 LINE L1 -785 5361 5182 1429 132 38 0 chr2 36965824 36966090 -216290493 + L1MA4 LINE L1 6014 6289 -11 444 319 58 16 chr2 36966144 36966332 -216290251 + L2 LINE L2 2936 3131 -182 365 188 0 0 chr2 36966767 36966831 -216289752 + L2 LINE L2 3207 3270 -2 240 194 32 16 chr2 36966833 36966895 -216289688 + GA-rich Low_complexity Low_complexity 3 65 0 2419 93 0 3 chr2 36968770 36969081 -216287502 + AluSq SINE Alu 1 310 -3 495 350 14 18 chr2 36969705 36969922 -216286661 + MLT1I LTR MaLR 3 218 -191 2656 117 7 21 chr2 36969946 36970119 -216286464 + L1PA13 LINE L1 5725 5899 -264 2382 141 6 3 chr2 36970119 36970482 -216286101 - THE1B LTR MaLR 0 364 1 2656 117 7 21 chr2 36970482 36970734 -216285849 + L1PA13 LINE L1 5899 6144 -19 1620 281 28 67 chr2 36970841 36971231 -216285352 + MLT1E LTR MaLR 3 407 -186 2256 122 0 0 chr2 36971231 36971543 -216285040 + AluSx SINE Alu 1 312 0 1620 281 28 67 chr2 36971543 36971661 -216284922 + MLT1E LTR MaLR 407 485 -108 1366 106 37 5 chr2 36971661 36971879 -216284704 - L1PA11 LINE L1 -1 6173 5949 1620 281 28 67 chr2 36971879 36971984 -216284599 + MLT1E LTR MaLR 485 593 0 247 270 0 0 chr2 36971984 36972047 -216284536 + MLT1I LTR MaLR 345 407 -2 263 183 17 0 chr2 36972124 36972217 -216284366 + AluSc SINE Alu 239 332 0 240 191 0 0 chr2 36972767 36972814 -216283769 + (GAATG)n Simple_repeat Simple_repeat 1 47 0 1719 211 53 17 chr2 36973521 36973996 -216282587 + Charlie4a DNA MER1_type 16 507 -1 420 280 65 12 chr2 36975373 36975541 -216281042 + MIR SINE MIR 79 255 -7 1539 177 63 23 chr2 36975998 36976349 -216280234 + MLT1A1 LTR MaLR 1 365 0 287 291 0 23 chr2 36976396 36976482 -216280101 + GA-rich Low_complexity Low_complexity 4 87 0 1641 129 0 0 chr2 36977268 36977501 -216279082 - AluSg/x SINE Alu -3 307 75 202 318 57 23 chr2 36977505 36977593 -216278990 - MIR SINE MIR -85 123 33 330 285 44 36 chr2 36979365 36979502 -216277081 + L1MEc LINE L1 211 348 -6048 1792 277 77 50 chr2 36979589 36980516 -216276067 + L1MEc LINE L1 513 1488 -4908 2730 10 10 7 chr2 36980516 36980825 -216275758 + AluYa5 SINE Alu 1 310 -1 1792 277 77 50 chr2 36980825 36981229 -216275354 + L1MEc LINE L1 1488 1880 -4516 210 37 0 0 chr2 36981246 36981273 -216275310 + (CA)n Simple_repeat Simple_repeat 2 28 0 3434 231 56 27 chr2 36981432 36982687 -216273896 + L1MEc LINE L1 2145 3420 -2795 2116 129 3 0 chr2 36982687 36982981 -216273602 - AluSq SINE Alu -18 295 1 3434 231 56 27 chr2 36982981 36983119 -216273464 + L1MEc LINE L1 3420 3552 -2663 2228 171 15 6 chr2 36983142 36983679 -216272904 - L1MA9 LINE L1 -623 5689 5149 2359 165 57 90 chr2 36983682 36984317 -216272266 + L1MA9 LINE L1 5664 6277 -35 1444 237 65 40 chr2 36984355 36984928 -216271655 + L1MEc LINE L1 3599 4185 -2030 457 323 76 31 chr2 36985123 36985411 -216271172 - L1M4 LINE L1 -3642 3923 3623 393 268 121 13 chr2 36985757 36985914 -216270669 - MIR3 SINE MIR -15 193 20 307 113 32 0 chr2 36987616 36987678 -216268905 + (CA)n Simple_repeat Simple_repeat 2 65 0 426 231 77 54 chr2 36988069 36988290 -216268293 - HAL1 LINE L1 -1035 1472 1247 1611 124 8 24 chr2 36989147 36989396 -216267187 - THE1C LTR MaLR -130 245 1 4289 203 33 11 chr2 36989396 36991155 -216265428 - L1M4 LINE L1 -5651 1914 15 21 36 0 0 chr2 36991162 36991190 -216265393 + AT_rich Low_complexity Low_complexity 1 28 0 272 243 40 0 chr2 36991357 36991431 -216265152 + LTR67 LTR ERVL 399 475 -82 781 228 63 0 chr2 36993139 36993376 -216263207 - MER20B DNA MER1_type -7 776 525 841 285 19 0 chr2 36993545 36993759 -216262824 - MIR SINE MIR -22 240 23 181 319 0 28 chr2 36993777 36993849 -216262734 + MER5A DNA MER1_type 67 136 -53 372 123 0 0 chr2 36994543 36994616 -216261967 + (TTAG)n Simple_repeat Simple_repeat 1 73 0 236 135 0 0 chr2 36994622 36994659 -216261924 - Charlie8 DNA MER1_type -2264 153 117 512 222 105 0 chr2 36994947 36995100 -216261483 - MER20B DNA MER1_type -7 776 608 233 329 77 45 chr2 36995285 36995440 -216261143 + MIR SINE MIR 49 208 -54 181 153 17 153 chr2 36995532 36995558 -216261025 + MIR3 SINE MIR 135 150 -58 1188 200 62 0 chr2 36995558 36995863 -216260720 - MER33 DNA MER1_type 0 324 1 181 153 17 153 chr2 36995863 36995895 -216260688 + MIR3 SINE MIR 150 185 -23 1543 176 45 4 chr2 36998103 36998261 -216258322 - AluJb SINE Alu -21 291 116 279 104 0 0 chr2 36998261 36998309 -216258274 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 1543 176 45 4 chr2 36998309 36998417 -216258166 - AluJb SINE Alu -196 116 14 21 71 0 0 chr2 36998734 36998776 -216257807 + AT_rich Low_complexity Low_complexity 1 42 0 632 344 181 35 chr2 36998785 37000160 -216256423 + L2 LINE L2 1686 3259 -54 559 264 78 84 chr2 37001311 37001645 -216254938 + MLT1I LTR MaLR 60 391 -18 2842 161 25 69 chr2 37002045 37002685 -216253898 + LTR9 LTR ERV1 1 612 0 20659 165 37 10 chr2 37004130 37009978 -216246605 - L1MA3 LINE L1 0 7724 1620 420 37 0 0 chr2 37009978 37010032 -216246551 + (TG)n Simple_repeat Simple_repeat 2 55 0 20659 165 37 10 chr2 37010032 37011685 -216244898 - L1MA3 LINE L1 -6104 1620 13 314 316 65 24 chr2 37012089 37012257 -216244326 - L1ME3A LINE L1 -8 6231 6057 1002 269 112 15 chr2 37012340 37012815 -216243768 - L1ME3A LINE L1 -202 6029 5509 1129 286 63 27 chr2 37012965 37013658 -216242925 - L1ME3A LINE L1 -2105 4110 3393 1257 289 79 37 chr2 37013783 37014712 -216241871 - L1MEc LINE L1 -3135 3080 2143 2229 233 104 46 chr2 37014717 37015344 -216241239 - MLT2F LTR ERVL 0 663 1 272 313 45 0 chr2 37015609 37015743 -216240840 - L1MEc LINE L1 -4596 1800 1661 39527 66 14 2 chr2 37015975 37022079 -216234504 - L1PA5 LINE L1 -2 6152 2 233 270 66 57 chr2 37022110 37022321 -216234262 - L1MEc LINE L1 -4935 1270 1058 306 312 89 25 chr2 37023109 37023266 -216233317 - L1MEc LINE L1 -5950 255 89 564 268 6 4 chr2 37023508 37023690 -216232893 - MIR SINE MIR -1 261 5 403 307 24 31 chr2 37023677 37023804 -216232779 + L2 LINE L2 3147 3272 0 * 346 174 28 7 chr2 37024063 37024207 -216232376 + (TA)n Simple_repeat Simple_repeat 1 147 0 356 304 193 0 chr2 37024218 37024389 -216232194 - MIR SINE MIR 0 262 59 226 311 159 26 chr2 37024880 37025031 -216231552 - L2 LINE L2 -205 3067 2897 1064 199 100 33 chr2 37025512 37025783 -216230800 + AluJo SINE Alu 17 305 -7 194 261 46 46 chr2 37028983 37029048 -216227535 - L2 LINE L2 -57 3256 3192 269 247 62 52 chr2 37029287 37029384 -216227199 - MER58B DNA MER1_type 0 341 244 326 215 51 13 chr2 37030131 37030210 -216226373 - L2 LINE L2 -40 3273 3192 660 337 21 33 chr2 37030426 37030669 -216225914 + MIR SINE MIR 8 247 -15 2253 72 41 0 chr2 37031076 37031366 -216225217 - AluSp SINE Alu -11 302 1 311 273 129 22 chr2 37031788 37031927 -216224656 - MIR SINE MIR -39 223 70 26 30 0 0 chr2 37031977 37032010 -216224573 + AT_rich Low_complexity Low_complexity 1 33 0 702 244 82 7 chr2 37032529 37032771 -216223812 - LTR16A LTR ERVL 0 453 98 614 139 24 0 chr2 37032772 37032937 -216223646 + (TA)n Simple_repeat Simple_repeat 2 170 0 216 167 0 0 chr2 37032948 37032996 -216223587 + (TA)n Simple_repeat Simple_repeat 2 49 0 1816 229 68 38 chr2 37032996 37033495 -216223088 - MLT2B3 LTR ERVL -40 514 1 1873 334 58 67 chr2 37033787 37034767 -216221816 - HERV16 LTR ERVL -384 5380 4393 2125 63 46 14 chr2 37034767 37035051 -216221532 + AluY SINE Alu 1 293 -18 321 26 0 0 chr2 37035051 37035089 -216221494 + (GGAA)n Simple_repeat Simple_repeat 2 39 0 1873 334 58 67 chr2 37035089 37036046 -216220537 - HERV16 LTR ERVL -1370 4394 3459 1930 121 67 25 chr2 37036046 37036402 -216220181 + THE1C LTR MaLR 1 371 -4 1873 334 58 67 chr2 37036402 37036642 -216219941 - HERV16 LTR ERVL -2305 3459 3219 2232 286 43 33 chr2 37036661 37037702 -216218881 - HERV16 LTR ERVL -3579 1417 330 1684 268 12 14 chr2 37037767 37038193 -216218390 - LTR16A LTR ERVL 0 450 26 407 296 50 45 chr2 37038787 37039007 -216217576 + MLT1L LTR MaLR 1 221 -394 1789 175 0 0 chr2 37040038 37040351 -216216232 + AluJb SINE Alu 3 315 0 211 37 0 0 chr2 37040324 37040386 -216216197 + (CAA)n Simple_repeat Simple_repeat 1 62 0 377 232 148 32 chr2 37040923 37041078 -216215505 - MER112 DNA MER1_type -86 174 2 221 312 43 32 chr2 37041384 37041477 -216215106 + MIR SINE MIR 54 147 -115 499 238 8 16 chr2 37043378 37043500 -216213083 - LTR28 LTR ERV1 -4 1016 896 1481 218 96 77 chr2 37043707 37044353 -216212230 - LTR1B LTR ERV1 -168 658 1 2612 241 47 12 chr2 37044878 37045645 -216210938 - L1MC4a LINE L1 -1 7807 7014 1059 138 0 6 chr2 37045791 37045951 -216210632 - AluSg/x SINE Alu -5 307 149 5999 47 5 0 chr2 37045951 37046697 -216209886 - L1PA5 LINE L1 -1517 4629 3880 6332 38 6 0 chr2 37046698 37048066 -216208517 + L1PA5 LINE L1 4645 6017 -137 644 236 11 22 chr2 37048067 37048249 -216208334 - L1M4 LINE L1 -785 5361 5182 1264 132 44 0 chr2 37048324 37048551 -216208032 + L1MA4 LINE L1 6014 6250 -50 1125 142 44 35 chr2 37049245 37049471 -216207112 + L1PA16 LINE L1 5939 6166 0 828 295 78 21 chr2 37049927 37050329 -216206254 + MLT1K LTR MaLR 142 587 -1 225 0 0 0 chr2 37050785 37050810 -216205773 + (T)n Simple_repeat Simple_repeat 1 25 0 1281 244 79 104 chr2 37051043 37052386 -216204197 + L1MC5 LINE L1 6611 7901 -60 2068 141 36 33 chr2 37052486 37052849 -216203734 + THE1B LTR MaLR 1 364 0 1541 262 95 64 chr2 37052881 37053247 -216203336 + L2 LINE L2 2410 2763 -550 1535 194 24 10 chr2 37053247 37053535 -216203048 - AluSx SINE Alu -20 292 1 1541 262 95 64 chr2 37053535 37053583 -216203000 + L2 LINE L2 2763 2808 -505 1514 143 10 108 chr2 37053583 37053897 -216202686 + AluSx SINE Alu 15 297 -15 1541 262 95 64 chr2 37053897 37054361 -216202222 + L2 LINE L2 2808 3313 0 207 0 0 0 chr2 37054469 37054492 -216202091 + (TTCA)n Simple_repeat Simple_repeat 3 25 0 184 311 189 0 chr2 37054498 37054572 -216202011 - L2 LINE L2 -17 3255 3168 273 339 64 0 chr2 37057142 37057251 -216199332 - MIR SINE MIR -35 227 112 716 303 84 13 chr2 37059184 37059494 -216197089 - L1MEd LINE L1 -5769 350 19 24 53 0 0 chr2 37059728 37059766 -216196817 + AT_rich Low_complexity Low_complexity 1 38 0 2510 53 0 3 chr2 37060264 37060568 -216196015 + AluY SINE Alu 1 303 -8 375 266 110 12 chr2 37061602 37061776 -216194807 + L1MC1 LINE L1 5584 5776 -345 437 232 91 0 chr2 37062189 37062288 -216194295 - MER5A DNA MER1_type -80 109 2 23 0 0 0 chr2 37062512 37062535 -216194048 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr2 37062828 37062860 -216193723 + AT_rich Low_complexity Low_complexity 1 32 0 452 302 110 16 chr2 37064230 37064412 -216192171 - MIR SINE MIR -16 246 48 25 0 0 0 chr2 37064571 37064596 -216191987 + AT_rich Low_complexity Low_complexity 1 25 0 1893 147 4 0 chr2 37064856 37065135 -216191448 - AluSx SINE Alu -30 282 3 240 290 61 69 chr2 37065300 37065431 -216191152 - L2 LINE L2 0 3313 3184 578 234 66 62 chr2 37067096 37067323 -216189260 - L1MC4 LINE L1 -4 8038 7811 1007 261 60 55 chr2 37067364 37067515 -216189068 - L1MC4 LINE L1 -317 7725 7576 2015 134 17 0 chr2 37067515 37067813 -216188770 - AluSx SINE Alu -9 303 1 411 155 8 4 chr2 37067813 37067842 -216188741 - Alu SINE Alu -308 0 1 1007 261 60 55 chr2 37067842 37068247 -216188336 - L1MC4 LINE L1 -495 7547 7137 657 193 6 0 chr2 37068535 37068671 -216187912 + L1MC1 LINE L1 5833 5970 -196 1443 248 137 50 chr2 37069415 37069940 -216186643 + MLT1E2 LTR MaLR 56 626 0 1641 223 25 11 chr2 37070496 37070860 -216185723 - MLT1A2 LTR MaLR -5 369 1 1067 226 68 77 chr2 37071246 37071586 -216184997 - MER58B DNA MER1_type -4 337 1 232 305 125 51 chr2 37072264 37072490 -216184093 + MIR SINE MIR 16 254 -8 292 296 124 12 chr2 37073195 37073364 -216183219 - MIR3 SINE MIR -6 202 15 658 271 12 12 chr2 37075311 37075477 -216181106 + MER5B DNA MER1_type 13 178 0 180 282 90 39 chr2 37075734 37075812 -216180771 + L2 LINE L2 3160 3241 -31 450 286 121 22 chr2 37076834 37077065 -216179518 - MLT1K LTR MaLR 0 588 335 773 249 58 5 chr2 37077289 37077478 -216179105 + MER58A DNA MER1_type 26 224 0 5279 86 1 1 chr2 37077729 37078448 -216178135 - L1PA8 LINE L1 0 6172 5454 2152 128 0 0 chr2 37080379 37080677 -216175906 - AluSx SINE Alu -12 300 3 540 104 65 5 chr2 37080748 37081134 -216175449 + (TA)n Simple_repeat Simple_repeat 1 409 0 27 62 0 0 chr2 37081135 37081183 -216175400 + AT_rich Low_complexity Low_complexity 1 48 0 607 35 71 29 chr2 37081184 37081354 -216175229 + (TA)n Simple_repeat Simple_repeat 1 177 0 630 133 45 0 chr2 37081456 37081769 -216174814 + (TA)n Simple_repeat Simple_repeat 1 327 0 37 39 0 0 chr2 37081769 37081820 -216174763 + AT_rich Low_complexity Low_complexity 1 51 0 294 29 0 0 chr2 37081948 37081983 -216174600 + (TG)n Simple_repeat Simple_repeat 1 35 0 1192 219 46 40 chr2 37082200 37082395 -216174188 - MER110A LTR ERV1 -70 398 199 2092 92 6 57 chr2 37082395 37082711 -216173872 - AluY SINE Alu -11 300 1 1192 219 46 40 chr2 37082711 37082840 -216173743 - MER110A LTR ERV1 -269 199 72 494 299 69 6 chr2 37082859 37083033 -216173550 + MIR SINE MIR 72 256 -6 26 30 0 0 chr2 37083399 37083432 -216173151 + AT_rich Low_complexity Low_complexity 1 33 0 1581 219 35 41 chr2 37083498 37083955 -216172628 + MER89 LTR ERV1 7 559 0 242 274 0 55 chr2 37084797 37084870 -216171713 + L2 LINE L2 3201 3269 -3 2524 191 123 62 chr2 37084964 37085742 -216170841 - LTR1B LTR ERV1 0 826 1 1803 107 4 29 chr2 37088155 37088436 -216168147 + AluSq SINE Alu 1 274 -39 21 0 0 0 chr2 37089434 37089455 -216167128 + AT_rich Low_complexity Low_complexity 1 21 0 1424 197 20 58 chr2 37089575 37089943 -216166640 + MLT2B1 LTR ERVL 1 355 -59 191 139 70 0 chr2 37089944 37089987 -216166596 + (CATATA)n Simple_repeat Simple_repeat 3 48 0 333 0 0 0 chr2 37090025 37090062 -216166521 + (TG)n Simple_repeat Simple_repeat 2 38 0 1578 164 17 17 chr2 37090150 37090437 -216166146 - AluJo SINE Alu -25 287 1 990 310 58 6 chr2 37090437 37090802 -216165781 + L2 LINE L2 2193 2576 -738 890 144 41 0 chr2 37090902 37091048 -216165535 - LTR47B LTR ERVL -291 152 1 3311 193 111 38 chr2 37091086 37091389 -216165194 + Charlie1 DNA MER1_type 1704 1983 -778 261 0 0 0 chr2 37091389 37091418 -216165165 + (CTATA)n Simple_repeat Simple_repeat 5 33 0 3311 193 111 38 chr2 37091418 37092097 -216164486 + Charlie1 DNA MER1_type 1983 2758 -3 576 299 69 37 chr2 37092238 37092455 -216164128 + L2 LINE L2 2900 3123 -190 384 269 79 20 chr2 37092487 37092740 -216163843 - L1MC5 LINE L1 -65 7896 7629 471 248 80 20 chr2 37092816 37093043 -216163540 - L1ME LINE L1 -609 5949 5711 962 248 90 6 chr2 37093059 37093402 -216163181 - L1ME LINE L1 -898 5642 5271 * 1341 260 79 49 chr2 37093400 37093996 -216162587 + L1MC4 LINE L1 7427 8040 -2 298 306 65 22 chr2 37094073 37094302 -216162281 + L1ME LINE L1 5564 5802 -319 363 221 36 0 chr2 37095152 37095279 -216161304 - L1MEc LINE L1 -3907 2637 2501 968 233 8 25 chr2 37095279 37095519 -216161064 + MLT1A1 LTR MaLR 1 236 -129 1028 313 73 22 chr2 37095940 37096991 -216159592 - L1ME3A LINE L1 -279 5891 4791 586 264 46 35 chr2 37097591 37097896 -216158687 - LTR16A1 LTR ERVL 0 457 172 39 68 0 0 chr2 37097983 37098057 -216158526 + AT_rich Low_complexity Low_complexity 1 74 0 288 0 0 0 chr2 37098531 37098563 -216158020 + (TA)n Simple_repeat Simple_repeat 1 32 0 * 351 0 0 0 chr2 37098562 37098601 -216157982 + (CA)n Simple_repeat Simple_repeat 2 40 0 35 0 0 0 chr2 37098833 37098868 -216157715 + AT_rich Low_complexity Low_complexity 1 35 0 831 74 16 8 chr2 37098868 37098990 -216157593 - L1P LINE L1 -1866 4280 4158 279 0 0 0 chr2 37099303 37099316 -216157267 + (TG)n Simple_repeat Simple_repeat 1 44 0 279 0 0 0 chr2 37099316 37099347 -216157236 + (TG)n Simple_repeat Simple_repeat 2 32 0 191 246 58 29 chr2 37099510 37099579 -216157004 - L2 LINE L2 -554 2760 2690 1019 340 83 18 chr2 37099735 37100362 -216156221 - L2 LINE L2 -864 2450 1783 206 352 25 37 chr2 37100613 37100775 -216155808 + L2 LINE L2 2894 3053 -219 23 0 0 0 chr2 37102170 37102193 -216154390 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 37102642 37102670 -216153913 + AT_rich Low_complexity Low_complexity 1 28 0 731 251 38 47 chr2 37102943 37103178 -216153405 + MIR SINE MIR 8 240 -22 192 77 0 0 chr2 37103184 37103210 -216153373 + (ATG)n Simple_repeat Simple_repeat 2 27 0 951 309 51 45 chr2 37103359 37103955 -216152628 + L2 LINE L2 2429 3028 -285 840 177 57 6 chr2 37103956 37104131 -216152452 + MER53 DNA DNA 1 184 -5 498 337 96 11 chr2 37104141 37104402 -216152181 + L2 LINE L2 3028 3310 -3 347 291 7 93 chr2 37104793 37104944 -216151639 + L2 LINE L2 3175 3312 -1 1027 278 82 56 chr2 37105756 37106508 -216150075 + HAL1 LINE L1 875 1646 -861 239 305 219 13 chr2 37106539 37106690 -216149893 + HAL1 LINE L1 1728 1909 -598 221 209 15 0 chr2 37106750 37106817 -216149766 + GA-rich Low_complexity Low_complexity 1 68 0 313 276 47 16 chr2 37107618 37107745 -216148838 - MIR SINE MIR -67 195 65 4632 179 50 34 chr2 37107793 37109594 -216146989 + L1MB7 LINE L1 4212 6054 -130 2105 107 0 32 chr2 37109594 37109904 -216146679 + AluSq SINE Alu 1 300 -13 4632 179 50 34 chr2 37109904 37110014 -216146569 + L1MB7 LINE L1 6054 6161 -23 184 71 36 0 chr2 37110494 37110522 -216146061 - MER5B DNA MER1_type -138 40 12 183 323 109 52 chr2 37110905 37111097 -216145486 - MIR SINE MIR -29 233 31 2707 120 26 0 chr2 37111981 37112398 -216144185 - MSTA LTR MaLR 0 428 1 214 301 14 27 chr2 37112501 37112574 -216144009 + MER5A DNA MER1_type 7 78 -111 814 167 0 53 chr2 37112583 37112733 -216143850 + FRAM SINE Alu 11 152 -24 375 41 0 0 chr2 37112746 37112795 -216143788 + (CA)n Simple_repeat Simple_repeat 2 50 0 704 321 5 9 chr2 37113873 37114088 -216142495 - MIR SINE MIR -29 233 20 621 264 54 91 chr2 37114282 37114388 -216142195 - MLT1L LTR MaLR -224 391 283 2532 63 3 0 chr2 37114388 37114690 -216141893 - AluSp SINE Alu -8 305 3 621 264 54 91 chr2 37114690 37114989 -216141594 - MLT1L LTR MaLR -332 283 1 1997 139 0 0 chr2 37115150 37115457 -216141126 - AluSx SINE Alu 0 310 4 283 311 49 25 chr2 37116250 37116372 -216140211 - MIR3 SINE MIR -3 205 81 28 0 0 0 chr2 37117579 37117607 -216138976 + AT_rich Low_complexity Low_complexity 1 28 0 309 265 70 30 chr2 37117835 37117979 -216138604 - L1MC/D LINE L1 -925 5434 5287 23 54 0 0 chr2 37118284 37118321 -216138262 + AT_rich Low_complexity Low_complexity 1 37 0 1299 271 121 13 chr2 37118593 37119055 -216137528 + LTR33 LTR ERVL 8 519 -2 394 316 134 40 chr2 37119087 37119921 -216136662 - L1MC/D LINE L1 -1533 4613 3692 390 313 94 26 chr2 37120617 37121000 -216135583 - HAL1 LINE L1 -938 1569 1161 501 17 0 0 chr2 37122797 37122855 -216133728 + (TG)n Simple_repeat Simple_repeat 1 58 0 463 119 71 0 chr2 37123165 37123249 -216133334 + MER53 DNA DNA 94 183 -6 408 300 101 77 chr2 37125473 37125720 -216130863 + MIR SINE MIR 9 261 -1 199 248 148 101 chr2 37128447 37128549 -216128034 + MER5B DNA MER1_type 21 134 -44 1461 193 66 7 chr2 37128549 37128823 -216127760 - AluJo SINE Alu -22 290 1 199 248 148 101 chr2 37128823 37128869 -216127714 + MER5B DNA MER1_type 134 176 -2 1286 124 38 61 chr2 37128887 37129159 -216127424 + Tigger4(Zombi) DNA MER2_type 1 2731 0 1311 212 96 79 chr2 37129988 37130101 -216126482 - MLT1D LTR MaLR 0 626 516 2042 153 0 0 chr2 37130101 37130408 -216126175 + AluSg SINE Alu 3 309 -1 1311 212 96 79 chr2 37130408 37130880 -216125703 - MLT1D LTR MaLR -110 516 13 1018 67 0 0 chr2 37131398 37131533 -216125050 + L1PA7 LINE L1 6020 6154 0 392 352 49 16 chr2 37131706 37132152 -216124431 + L1ME LINE L1 5354 5814 -307 6793 131 36 20 chr2 37132422 37133584 -216122999 - L1P LINE L1 -3281 2865 1685 1618 156 58 35 chr2 37133686 37134033 -216122550 - LTR49-int LTR ERV1 -689 5642 5288 381 312 54 40 chr2 37134134 37134376 -216122207 - L2 LINE L2 -281 3032 2787 355 250 33 22 chr2 37134536 37134628 -216121955 - MIR SINE MIR -157 105 13 21 0 0 0 chr2 37134941 37134962 -216121621 + AT_rich Low_complexity Low_complexity 1 21 0 1517 169 38 35 chr2 37135641 37135827 -216120756 + Charlie5 DNA MER1_type 2248 2432 -192 1498 208 0 14 chr2 37135827 37136116 -216120467 + AluJo SINE Alu 28 312 0 1517 169 38 35 chr2 37136116 37136301 -216120282 + Charlie5 DNA MER1_type 2432 2620 -4 311 345 72 72 chr2 37138151 37138667 -216117916 + L2 LINE L2 2258 2773 -541 28 0 0 0 chr2 37140661 37140689 -216115894 + AT_rich Low_complexity Low_complexity 1 28 0 2284 107 0 0 chr2 37141049 37141348 -216115235 + AluSc SINE Alu 1 299 -10 257 304 0 0 chr2 37141594 37141663 -216114920 - L2 LINE L2 -3 3310 3242 23 54 0 0 chr2 37141664 37141701 -216114882 + AT_rich Low_complexity Low_complexity 1 37 0 565 331 98 80 chr2 37142012 37142430 -216114153 - L2 LINE L2 -425 2889 2453 4659 173 16 13 chr2 37142430 37143332 -216113251 + L1MC2 LINE L1 5432 6335 -9 565 331 98 80 chr2 37143332 37143610 -216112973 - L2 LINE L2 -861 2453 2181 1102 56 0 28 chr2 37143932 37144076 -216112507 + AluSg SINE Alu 1 140 -170 7554 38 32 0 chr2 37144176 37145826 -216110757 + L1PA4 LINE L1 4467 6144 -11 22 35 0 0 chr2 37147577 37147606 -216108977 + AT_rich Low_complexity Low_complexity 1 29 0 2072 141 36 33 chr2 37148025 37148388 -216108195 - THE1B LTR MaLR 0 364 1 208 250 0 33 chr2 37148398 37148458 -216108125 - L2 LINE L2 -3 3269 3212 447 125 10 87 chr2 37148503 37148607 -216107976 + L1MA5A LINE L1 4363 4458 -1688 3294 159 18 5 chr2 37148708 37149660 -216106923 + L1MA5A LINE L1 4872 5835 -462 1811 166 20 3 chr2 37149883 37150178 -216106405 + AluJb SINE Alu 2 301 -11 220 196 87 0 chr2 37150628 37150674 -216105909 - MIR3 SINE MIR -26 182 133 369 300 45 0 chr2 37150946 37151056 -216105527 + MER96 DNA MER1_type? 61 175 0 203 267 13 27 chr2 37152044 37152119 -216104464 + CT-rich Low_complexity Low_complexity 1 74 0 384 291 109 6 chr2 37154326 37154491 -216102092 + L1ME4a LINE L1 5541 5722 -399 765 33 0 0 chr2 37154616 37154708 -216101875 + (TATATG)n Simple_repeat Simple_repeat 5 96 0 378 232 20 0 chr2 37154709 37154808 -216101775 + L1ME4a LINE L1 5986 6086 -35 207 0 0 0 chr2 37157228 37157251 -216099332 + (T)n Simple_repeat Simple_repeat 1 23 0 193 319 96 64 chr2 37157923 37158080 -216098503 + MIR SINE MIR 12 173 -89 201 241 0 69 chr2 37159434 37159550 -216097033 + A-rich Low_complexity Low_complexity 2 109 0 531 282 38 19 chr2 37160631 37160844 -216095739 - MIR SINE MIR -24 238 22 230 237 102 0 chr2 37160910 37160969 -216095614 + MLT1H1 LTR MaLR 71 135 -420 237 271 41 74 chr2 37161284 37161406 -216095177 + MLT1H LTR MaLR 428 545 -4 305 303 212 36 chr2 37162549 37162988 -216093595 + L2 LINE L2 2147 2668 -646 411 271 220 5 chr2 37162988 37163202 -216093381 - MIR SINE MIR 0 262 3 327 242 0 0 chr2 37163591 37163657 -216092926 + MIR SINE MIR 53 118 -144 317 286 54 81 chr2 37163826 37164011 -216092572 + MIR SINE MIR 57 236 -26 2125 225 60 13 chr2 37164113 37164708 -216091875 - L1MC4 LINE L1 -145 7897 7275 1146 214 108 35 chr2 37164750 37165147 -216091436 - L1MC4 LINE L1 -957 7085 6660 768 280 93 108 chr2 37165861 37166825 -216089758 + L2 LINE L2 1752 2701 -613 204 40 0 0 chr2 37166838 37166863 -216089720 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1976 138 0 0 chr2 37166865 37167141 -216089442 - AluSx SINE Alu -30 282 7 10014 147 21 31 chr2 37167172 37169915 -216086668 + L1P3 LINE L1 217 2952 -3509 3401 105 13 47 chr2 37170015 37170657 -216085926 + L1PA8 LINE L1 5563 6185 0 205 342 81 18 chr2 37170658 37170769 -216085814 + L2 LINE L2 2703 2820 -494 542 355 63 31 chr2 37170865 37171183 -216085400 + L2 LINE L2 2945 3272 0 455 267 164 35 chr2 37171304 37171536 -216085047 + MIR SINE MIR 1 262 0 37171 39 4 2 chr2 37172269 37177801 -216078782 + L1PA3 LINE L1 606 6147 -8 30 0 0 0 chr2 37177801 37177831 -216078752 + AT_rich Low_complexity Low_complexity 1 30 0 520 234 117 51 chr2 37178337 37178534 -216078049 + MIR SINE MIR 47 256 -6 455 346 41 1 chr2 37178673 37178842 -216077741 + MIR SINE MIR 37 210 -52 2028 133 0 41 chr2 37178953 37179270 -216077313 + AluSx SINE Alu 1 304 -8 21 0 0 0 chr2 37179382 37179403 -216077180 + AT_rich Low_complexity Low_complexity 1 21 0 220 377 36 22 chr2 37179855 37179993 -216076590 + MIR3 SINE MIR 6 145 -63 12475 40 2 0 chr2 37180002 37181609 -216074974 - L1P LINE L1 -3220 2926 1317 12097 18 10 7 chr2 37181610 37183776 -216072807 + L1PA4 LINE L1 3987 6155 0 360 371 11 6 chr2 37183928 37184103 -216072480 - MIR SINE MIR -5 257 82 5843 141 20 15 chr2 37184739 37185884 -216070699 - L1MA4A LINE L1 -6 6297 5144 222 164 0 36 chr2 37186488 37186543 -216070040 + CT-rich Low_complexity Low_complexity 4 56 0 348 299 24 0 chr2 37187028 37187155 -216069428 + L1ME4a LINE L1 5740 5869 -252 4916 12 2 2 chr2 37187176 37187766 -216068817 - L1HS LINE L1 0 6155 5566 5754 120 25 10 chr2 37187866 37188875 -216067708 + L1P LINE L1 2636 3659 -2487 4816 117 141 24 chr2 37188877 37189952 -216066631 + pTR5 LTR ERV1 743 2032 -406 316 220 11 0 chr2 37189952 37190043 -216066540 + LTR30 LTR ERV1 551 642 -80 1429 111 0 18 chr2 37190046 37190271 -216066312 + pTR5 LTR ERV1 172 392 -2046 11169 108 4 2 chr2 37190274 37192052 -216064531 + L1P3 LINE L1 3661 5440 -732 344 289 0 0 chr2 37192186 37192276 -216064307 + L1MC4 LINE L1 6614 6703 -1339 336 249 0 0 chr2 37192276 37192441 -216064142 + (TA)n Simple_repeat Simple_repeat 2 166 0 345 249 0 0 chr2 37192456 37192633 -216063950 + (TA)n Simple_repeat Simple_repeat 1 177 0 387 257 0 0 chr2 37192648 37193173 -216063410 + (TA)n Simple_repeat Simple_repeat 1 525 0 294 266 0 0 chr2 37193188 37193365 -216063218 + (TA)n Simple_repeat Simple_repeat 1 177 0 387 264 0 0 chr2 37193380 37193729 -216062854 + (TA)n Simple_repeat Simple_repeat 1 349 0 207 256 0 0 chr2 37193740 37193857 -216062726 + (TA)n Simple_repeat Simple_repeat 2 118 0 387 237 0 0 chr2 37193904 37194081 -216062502 + (TA)n Simple_repeat Simple_repeat 1 177 0 7380 28 2 2 chr2 37195390 37196957 -216059626 - L1PA4 LINE L1 -11 6144 4568 26545 40 2 1 chr2 37197057 37200856 -216055727 - L1P2 LINE L1 -401 5754 1955 323 300 54 46 chr2 37201974 37202104 -216054479 - L2 LINE L2 0 3313 3183 302 277 0 92 chr2 37202290 37202431 -216054152 - L1MEd LINE L1 -5130 989 862 488 330 104 56 chr2 37202510 37202904 -216053679 - L1MEd LINE L1 -5386 733 321 345 342 99 26 chr2 37202904 37203208 -216053375 + L2 LINE L2 2947 3272 -41 231 222 0 0 chr2 37203637 37203691 -216052892 + A-rich Low_complexity Low_complexity 1 54 0 298 175 120 66 chr2 37205767 37205894 -216050689 - MIR SINE MIR -83 179 39 345 24 0 0 chr2 37206188 37206230 -216050353 + (CA)n Simple_repeat Simple_repeat 1 42 0 437 189 11 0 chr2 37206259 37206354 -216050229 + CT-rich Low_complexity Low_complexity 2 97 0 841 75 5 54 chr2 37206358 37206544 -216050039 + (TTTC)n Simple_repeat Simple_repeat 3 179 0 273 256 15 15 chr2 37206546 37206683 -216049900 + CT-rich Low_complexity Low_complexity 4 140 0 3095 58 20 0 chr2 37206889 37207331 -216049252 + L1PA7 LINE L1 5738 6187 0 183 80 0 0 chr2 37208490 37208515 -216048068 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 891 214 51 19 chr2 37210797 37211012 -216045571 + L1PA13 LINE L1 54 275 -6564 3388 235 27 24 chr2 37211018 37212071 -216044512 + L1PA13 LINE L1 1668 2723 -4126 5554 121 12 18 chr2 37212096 37213442 -216043141 + L1PA15 LINE L1 4823 6164 -1 665 263 11 5 chr2 37213825 37214011 -216042572 - MLT1A2 LTR MaLR -19 355 169 186 43 0 0 chr2 37214015 37214038 -216042545 + (TTC)n Simple_repeat Simple_repeat 1 23 0 523 174 9 35 chr2 37214038 37214153 -216042430 - MLT1A2 LTR MaLR -254 120 9 2071 128 60 23 chr2 37214454 37214805 -216041778 + THE1B LTR MaLR 1 364 0 180 358 0 12 chr2 37214853 37214934 -216041649 + L2 LINE L2 3234 3313 0 753 190 50 0 chr2 37214940 37215140 -216041443 - L1MC3 LINE L1 -1 7784 7575 747 153 117 0 chr2 37215155 37215286 -216041297 - L1MA9 LINE L1 -10 6302 6147 396 0 0 0 chr2 37215286 37215330 -216041253 + (TG)n Simple_repeat Simple_repeat 1 44 0 747 153 117 0 chr2 37215330 37215361 -216041222 - L1MA9 LINE L1 -165 6147 6121 624 160 0 46 chr2 37215401 37215532 -216041051 + L1MA9 LINE L1 6004 6128 -184 1990 129 3 7 chr2 37215542 37215837 -216040746 - AluSg SINE Alu -16 294 1 2964 178 16 16 chr2 37215838 37216477 -216040106 - L1MC3 LINE L1 -199 7586 6948 316 244 23 35 chr2 37216691 37216777 -216039806 - MIR3 SINE MIR -15 193 109 358 332 207 26 chr2 37216980 37217642 -216038941 - L2 LINE L2 -601 2713 1932 2087 125 0 26 chr2 37220273 37220584 -216035999 - AluSx SINE Alu -3 309 7 509 148 0 10 chr2 37221541 37221642 -216034941 + (TTCC)n Simple_repeat Simple_repeat 3 102 0 271 310 23 0 chr2 37222051 37222138 -216034445 - MIR SINE MIR -65 197 109 7280 201 77 76 chr2 37223177 37225135 -216031448 + L1MC3 LINE L1 5169 7217 -568 266 264 11 22 chr2 37225135 37225226 -216031357 + MLT1F1 LTR MaLR 35 124 -443 7280 201 77 76 chr2 37225226 37225796 -216030787 + L1MC3 LINE L1 7217 7785 0 2866 133 2 0 chr2 37226049 37226484 -216030099 - L1PA16 LINE L1 -17 6149 5714 21 0 0 0 chr2 37227023 37227044 -216029539 + AT_rich Low_complexity Low_complexity 1 21 0 22 70 0 0 chr2 37227792 37227835 -216028748 + AT_rich Low_complexity Low_complexity 1 43 0 658 286 16 22 chr2 37228725 37228910 -216027673 - MIR SINE MIR -42 220 37 248 225 0 0 chr2 37228987 37229058 -216027525 + A-rich Low_complexity Low_complexity 3 73 0 452 247 224 12 chr2 37229411 37229581 -216027002 - L2 LINE L2 -5 3308 3103 1996 188 56 34 chr2 37229581 37230049 -216026534 + MLT2B1 LTR ERVL 1 478 -42 210 191 0 0 chr2 37230049 37230096 -216026487 + (CCTA)n Simple_repeat Simple_repeat 1 47 0 515 67 27 0 chr2 37230102 37230177 -216026406 + (TCCA)n Simple_repeat Simple_repeat 4 80 0 1399 191 66 0 chr2 37230224 37230480 -216026103 + AluJo SINE Alu 1 273 -39 453 19 0 0 chr2 37230488 37230542 -216026041 + (CA)n Simple_repeat Simple_repeat 1 54 0 2041 265 80 52 chr2 37230603 37231517 -216025066 - L2 LINE L2 -870 2444 1506 342 244 267 15 chr2 37232044 37232179 -216024404 + MIR3 SINE MIR 16 184 -24 26 0 0 0 chr2 37232751 37232777 -216023806 + AT_rich Low_complexity Low_complexity 1 26 0 754 297 26 0 chr2 37233108 37233303 -216023280 + MIR SINE MIR 59 258 -4 249 33 0 0 chr2 37233326 37233356 -216023227 + (ATG)n Simple_repeat Simple_repeat 3 32 0 559 297 66 15 chr2 37233446 37233719 -216022864 - MER102b DNA MER1_type -1 340 54 3578 121 28 31 chr2 37233873 37234509 -216022074 + L1MA7 LINE L1 5656 6289 -2 748 244 21 4 chr2 37234512 37234746 -216021837 - L1M4 LINE L1 -3273 2873 2636 198 297 88 33 chr2 37235932 37236023 -216020560 + L2 LINE L2 3210 3305 -8 198 0 0 0 chr2 37236648 37236670 -216019913 + (TTA)n Simple_repeat Simple_repeat 3 24 0 1213 163 10 5 chr2 37236888 37237084 -216019499 - AluJo SINE Alu -60 252 56 293 103 0 0 chr2 37237128 37237167 -216019416 - AluJo SINE Alu -252 51 13 329 260 81 49 chr2 37237940 37238063 -216018520 + MIR SINE MIR 16 142 -66 217 333 0 0 chr2 37238337 37238400 -216018183 + CT-rich Low_complexity Low_complexity 4 66 0 2162 104 0 13 chr2 37238540 37238838 -216017745 - AluSq SINE Alu -17 296 3 2629 128 34 18 chr2 37238857 37239357 -216017226 - L1MA4 LINE L1 -6 6294 5787 1152 189 24 12 chr2 37239368 37239616 -216016967 - MLT1A1 LTR MaLR -112 253 3 311 234 47 55 chr2 37239616 37239744 -216016839 - L1MEd LINE L1 -3201 3740 3614 915 196 0 0 chr2 37239744 37239902 -216016681 - AluJb SINE Alu -11 301 144 1046 286 77 19 chr2 37239903 37240259 -216016324 - L1MEd LINE L1 -3320 3621 3287 2343 112 0 0 chr2 37240259 37240555 -216016028 - AluSq SINE Alu -17 296 1 1046 286 77 19 chr2 37240555 37240876 -216015707 - L1MEd LINE L1 -3654 3287 2905 6787 126 54 19 chr2 37240890 37242079 -216014504 - Tigger3b DNA MER2_type 0 1231 1 192 77 0 0 chr2 37242239 37242265 -216014318 + (TATG)n Simple_repeat Simple_repeat 3 28 0 386 298 50 56 chr2 37242558 37243602 -216012981 - L1MEd LINE L1 -4679 2443 1373 2202 84 3 14 chr2 37244685 37244981 -216011602 - AluSg SINE Alu -17 293 1 507 323 44 13 chr2 37245295 37245524 -216011059 + L2 LINE L2 2174 2409 -905 1247 237 22 37 chr2 37245581 37245991 -216010592 - L1MC2 LINE L1 -9 6335 5932 40550 34 25 1 chr2 37246092 37251302 -216005281 - L1P LINE L1 -813 5333 1 307 246 189 0 chr2 37251324 37251446 -216005137 + L1ME4a LINE L1 5904 6048 -73 2376 221 58 39 chr2 37251773 37252551 -216004032 - L1MC4a LINE L1 -392 7416 6624 420 295 35 12 chr2 37253029 37253202 -216003381 - L1MEd LINE L1 -6224 199 23 6317 155 10 10 chr2 37253248 37254447 -216002136 - L1P LINE L1 -2546 3600 2402 983 179 167 58 chr2 37254460 37254790 -216001793 - LTR18B LTR ERVL -248 366 1 4585 259 62 13 chr2 37254790 37256234 -216000349 - L1PA12 LINE L1 -6063 1518 5 339 240 6 101 chr2 37257876 37258055 -215998528 - MER112 DNA MER1_type -6 254 93 280 333 74 39 chr2 37258804 37259062 -215997521 + L2 LINE L2 2709 2975 -339 297 285 215 0 chr2 37259458 37259583 -215997000 + MIR SINE MIR 105 258 0 498 122 0 24 chr2 37259583 37259665 -215996918 - MADE1 DNA Mariner 0 80 1 572 263 17 23 chr2 37260083 37260258 -215996325 + MIR3 SINE MIR 28 201 -7 808 279 184 2 chr2 37260318 37260730 -215995853 - LTR33 LTR ERVL -24 497 11 2314 75 6 43 chr2 37262155 37262477 -215994106 + AluSx SINE Alu 3 312 0 2305 99 7 0 chr2 37262664 37262967 -215993616 - AluY SINE Alu -6 305 1 436 265 66 30 chr2 37263837 37264003 -215992580 - MER20B DNA MER1_type -611 172 1 244 333 119 0 chr2 37264612 37264696 -215991887 + L2 LINE L2 3169 3262 -10 208 315 123 0 chr2 37265930 37266060 -215990523 + MIR SINE MIR 117 262 0 233 408 8 8 chr2 37266422 37266542 -215990041 + MIR SINE MIR 20 139 -123 472 127 13 0 chr2 37266712 37266791 -215989792 + MADE1 DNA Mariner 1 80 0 308 343 41 18 chr2 37266826 37266995 -215989588 + MIR3 SINE MIR 31 203 -5 2075 175 117 47 chr2 37267068 37267200 -215989383 - L1MD3 LINE L1 -10 7985 7864 2534 190 32 48 chr2 37267200 37267763 -215988820 + MLT2B3 LTR ERVL 1 554 0 2075 175 117 47 chr2 37267763 37268178 -215988405 - L1MD3 LINE L1 -131 7864 7400 440 204 11 0 chr2 37268180 37268273 -215988310 - MLT1F1 LTR MaLR -448 119 26 654 270 109 15 chr2 37268803 37269070 -215987513 + MLT1J2 LTR MaLR 155 446 -4 476 191 0 38 chr2 37269768 37269873 -215986710 + MLT1F1 LTR MaLR 24 124 -443 1407 129 4 9 chr2 37269878 37270103 -215986480 + L1MD3 LINE L1 7407 7630 -365 561 211 81 0 chr2 37271348 37271471 -215985112 + MER94 DNA DNA 2 134 0 181 250 0 0 chr2 37271592 37271632 -215984951 + MIR SINE MIR 1 40 -222 670 292 50 5 chr2 37271693 37271912 -215984671 + MIR SINE MIR 31 259 -3 300 284 84 52 chr2 37272823 37272978 -215983605 - MIR SINE MIR -7 255 96 2336 71 0 7 chr2 37273572 37273858 -215982725 + AluY SINE Alu 1 286 -25 225 0 0 0 chr2 37273858 37273883 -215982700 + (TTAAA)n Simple_repeat Simple_repeat 3 27 0 318 284 118 0 chr2 37273896 37274023 -215982560 - MIR SINE MIR -1 261 120 495 333 56 4 chr2 37274159 37274393 -215982190 - MIR SINE MIR -12 250 5 21 57 0 0 chr2 37274650 37274685 -215981898 + AT_rich Low_complexity Low_complexity 1 35 0 1571 223 17 11 chr2 37274775 37275134 -215981449 + MLT1A1 LTR MaLR 5 365 0 2492 88 23 0 chr2 37275193 37275544 -215981039 - L1PA11 LINE L1 0 6174 5816 511 320 87 55 chr2 37275661 37276256 -215980327 - L1MEd LINE L1 -987 1503 806 758 232 12 6 chr2 37276924 37277088 -215979495 + MER45A DNA AcHobo 7 171 -7 363 78 0 0 chr2 37277612 37277663 -215978920 + (TG)n Simple_repeat Simple_repeat 2 52 0 23 0 0 0 chr2 37277942 37277965 -215978618 + AT_rich Low_complexity Low_complexity 1 23 0 516 281 13 20 chr2 37278457 37278610 -215977973 - MIR SINE MIR -109 153 2 992 230 79 7 chr2 37278667 37278958 -215977625 - MLT1A1 LTR MaLR 0 365 54 199 326 146 0 chr2 37279158 37279247 -215977336 + L2 LINE L2 3204 3305 -8 1477 118 151 0 chr2 37279255 37279548 -215977035 - AluSx SINE Alu 0 330 1 244 310 70 0 chr2 37279561 37279632 -215976951 + MIR3 SINE MIR 85 160 -48 347 313 66 6 chr2 37279632 37279798 -215976785 - MER5B DNA MER1_type 0 178 3 194 234 0 43 chr2 37279803 37279850 -215976733 + MER5A DNA MER1_type 2 46 -143 363 287 47 16 chr2 37280926 37281055 -215975528 + MIR SINE MIR 56 188 -74 1253 181 15 5 chr2 37281077 37281282 -215975301 + AluJo SINE Alu 91 297 -15 2433 96 6 16 chr2 37281321 37281685 -215974898 - L1PB2 LINE L1 -9 6142 5783 1255 128 0 5 chr2 37281774 37281969 -215974614 - L1PA16 LINE L1 -9 6157 5964 597 221 97 41 chr2 37282084 37282279 -215974304 + MER63A DNA MER1_type 4 209 -1 364 283 54 73 chr2 37282474 37282679 -215973904 - MIR3 SINE MIR -7 201 1 4205 108 32 61 chr2 37282793 37283596 -215972987 + L1PA15 LINE L1 5386 6165 0 180 0 0 0 chr2 37283662 37283682 -215972901 + (T)n Simple_repeat Simple_repeat 1 20 0 27 29 0 0 chr2 37283885 37283919 -215972664 + AT_rich Low_complexity Low_complexity 1 34 0 2471 292 123 51 chr2 37283920 37285732 -215970851 - L2 LINE L2 -25 3288 1295 586 277 58 10 chr2 37285732 37285938 -215970645 - L2 LINE L2 -2552 762 547 216 184 0 0 chr2 37286027 37286076 -215970507 + (CA)n Simple_repeat Simple_repeat 2 50 0 201 266 32 82 chr2 37286545 37286557 -215970026 + L2 LINE L2 2163 2174 -1140 323 194 13 191 chr2 37286557 37286866 -215969717 - MER112 DNA MER1_type -2 254 1 201 266 32 82 chr2 37286866 37287011 -215969572 + L2 LINE L2 2174 2312 -1002 915 122 0 0 chr2 37287397 37287536 -215969047 - L1PA11 LINE L1 -1 6173 6035 195 293 17 0 chr2 37287618 37287676 -215968907 + L2 LINE L2 3212 3270 -2 320 241 78 78 chr2 37289102 37289218 -215967365 + MIR SINE MIR 1 116 -146 2255 120 0 0 chr2 37289267 37289568 -215967015 + AluSx SINE Alu 1 301 -11 282 233 27 14 chr2 37289587 37289660 -215966923 + L1MDa LINE L1 19 92 -6448 378 260 85 6 chr2 37289706 37289883 -215966700 + L1MB3 LINE L1 5121 5311 -835 1807 137 145 14 chr2 37289883 37290249 -215966334 - MSTA LTR MaLR 0 428 15 320 199 143 0 chr2 37290302 37290408 -215966175 + L1MD2 LINE L1 6194 7953 -42 21 0 0 0 chr2 37290446 37290467 -215966116 + AT_rich Low_complexity Low_complexity 1 21 0 313 272 54 0 chr2 37290480 37290572 -215966011 + MIR SINE MIR 140 236 -26 2171 169 44 108 chr2 37291122 37291733 -215964850 - L1MD3 LINE L1 -26 7969 7398 360 152 63 25 chr2 37291731 37291810 -215964773 - L1MC4 LINE L1 -1258 6784 6703 * 230 191 48 0 chr2 37291812 37291875 -215964708 + L1ME4a LINE L1 6025 6090 -31 514 194 24 8 chr2 37291886 37292010 -215964573 - MLT1D LTR MaLR -7 498 373 1207 115 6 17 chr2 37292012 37292186 -215964397 - AluSx SINE Alu -140 172 1 756 182 6 23 chr2 37292278 37292454 -215964129 + L1MA10 LINE L1 6160 6332 -2 432 264 114 33 chr2 37292963 37293236 -215963347 + L1MB3 LINE L1 5524 5818 -303 484 208 60 20 chr2 37293365 37293514 -215963069 + MER104 DNA Tc2 1 155 -25 449 286 94 79 chr2 37294453 37294932 -215961651 + MLT1J LTR MaLR 26 511 0 2522 73 0 0 chr2 37295093 37295395 -215961188 - AluSg SINE Alu -8 302 1 2424 88 0 0 chr2 37295917 37296213 -215960370 - AluSg SINE Alu -14 296 1 28 0 0 0 chr2 37297232 37297260 -215959323 + AT_rich Low_complexity Low_complexity 1 28 0 2272 88 14 0 chr2 37297713 37298010 -215958573 + AluY SINE Alu 1 301 -10 209 231 0 0 chr2 37298591 37298630 -215957953 + (TG)n Simple_repeat Simple_repeat 2 40 0 1423 169 24 14 chr2 37298649 37298945 -215957638 + L1MB3 LINE L1 5885 6183 0 196 331 49 25 chr2 37298998 37299161 -215957422 - L2 LINE L2 -534 2780 2614 333 42 21 0 chr2 37300031 37300079 -215956504 + L1PA3 LINE L1 6107 6155 0 183 42 0 0 chr2 37300138 37300162 -215956421 + (CA)n Simple_repeat Simple_repeat 1 24 0 239 240 40 30 chr2 37300429 37300529 -215956054 - L1ME LINE L1 -283 5881 5781 1873 135 14 27 chr2 37301360 37301656 -215954927 + AluJb SINE Alu 1 292 -20 920 244 54 27 chr2 37303169 37303464 -215953119 + L1ME1 LINE L1 5641 5943 -223 960 217 112 34 chr2 37303972 37304433 -215952150 + MLT1E LTR MaLR 1 593 0 347 344 96 0 chr2 37304983 37305108 -215951475 + L2 LINE L2 2920 3056 -257 207 322 34 42 chr2 37305252 37305370 -215951213 + L2 LINE L2 3196 3312 -1 195 175 75 0 chr2 37305417 37305457 -215951126 + MIR SINE MIR 33 75 -133 893 249 9 14 chr2 37307610 37307827 -215948756 + MER20B DNA MER1_type 4 219 0 378 272 44 4 chr2 37308248 37308403 -215948180 - MIR SINE MIR -34 228 4 344 339 9 9 chr2 37308776 37308888 -215947695 - L2 LINE L2 -1 3271 3160 2297 79 0 16 chr2 37309232 37309536 -215947047 + AluY SINE Alu 1 299 -12 8935 24 0 271 chr2 37312037 37313939 -215942644 + SVA Other Other 1 1386 0 254 88 0 0 chr2 37314046 37314080 -215942503 - MLT1C LTR MaLR 0 467 434 * 367 203 13 0 chr2 37314078 37314157 -215942426 - MLT1B LTR MaLR -277 113 34 529 322 23 0 chr2 37314421 37314595 -215941988 + MIR SINE MIR 14 191 -71 270 160 0 0 chr2 37314603 37314653 -215941930 + (TAGA)n Simple_repeat Simple_repeat 4 53 0 192 40 0 0 chr2 37314653 37314678 -215941905 + (GA)n Simple_repeat Simple_repeat 2 26 0 * 375 195 0 0 chr2 37314677 37314800 -215941783 + (TA)n Simple_repeat Simple_repeat 2 124 0 317 284 23 0 chr2 37314805 37314893 -215941690 + L1MC4 LINE L1 6614 6703 -1339 183 100 0 0 chr2 37314900 37314930 -215941653 + (TA)n Simple_repeat Simple_repeat 1 30 0 301 222 0 16 chr2 37315060 37315123 -215941460 + L1MCa LINE L1 2006 2067 -4359 * 351 273 23 0 chr2 37315103 37315191 -215941392 + L1MC4 LINE L1 6614 6703 -1339 331 267 0 22 chr2 37315198 37315288 -215941295 + L1MC4 LINE L1 6615 6702 -1340 370 295 0 0 chr2 37315289 37315428 -215941155 + (TA)n Simple_repeat Simple_repeat 1 139 0 918 185 36 0 chr2 37316958 37317153 -215939430 - MER3 DNA MER1_type -7 202 1 374 330 144 5 chr2 37317564 37317752 -215938831 - MIR SINE MIR -26 236 23 24 0 0 0 chr2 37318574 37318598 -215937985 + AT_rich Low_complexity Low_complexity 1 24 0 285 226 16 0 chr2 37318881 37318943 -215937640 - Charlie8 DNA MER1_type 0 2417 2355 3514 247 70 5 chr2 37319218 37320146 -215936437 + L1M4b LINE L1 36 1023 -5836 300 130 3 32 chr2 37320153 37320234 -215936349 + L1MB7 LINE L1 5087 5165 -981 334 174 0 54 chr2 37320234 37320326 -215936257 + FLAM_A SINE Alu 47 133 0 2816 169 59 7 chr2 37320332 37321227 -215935356 + L1MB7 LINE L1 5164 6172 -12 1543 248 11 36 chr2 37321804 37322272 -215934311 + MLT2B1 LTR ERVL 1 456 -64 22 35 0 0 chr2 37322287 37322316 -215934267 + AT_rich Low_complexity Low_complexity 1 29 0 1139 108 76 16 chr2 37322886 37323071 -215933512 + L1PB1 LINE L1 5949 6144 -7 29 78 0 0 chr2 37323074 37323138 -215933445 + AT_rich Low_complexity Low_complexity 1 64 0 425 287 9 9 chr2 37323727 37323842 -215932741 + L3b LINE CR1 1111 1225 -358 282 336 53 15 chr2 37324035 37324166 -215932417 - L2 LINE L2 -13 3259 3124 324 333 50 35 chr2 37324445 37324586 -215931997 - MIR3 SINE MIR -60 148 6 267 31 0 0 chr2 37324700 37324732 -215931851 + (CA)n Simple_repeat Simple_repeat 1 32 0 27 0 0 0 chr2 37325104 37325131 -215931452 + AT_rich Low_complexity Low_complexity 1 27 0 907 253 54 74 chr2 37327164 37327419 -215929164 - MLT1I LTR MaLR -8 401 155 2357 102 0 0 chr2 37327419 37327722 -215928861 + AluSq SINE Alu 1 303 -10 907 253 54 74 chr2 37327722 37327873 -215928710 - MLT1I LTR MaLR -254 155 3 1863 199 25 32 chr2 37328047 37328479 -215928104 + MLT1D LTR MaLR 3 431 -74 217 341 185 15 chr2 37328899 37329034 -215927549 - L3 LINE CR1 -6 1571 1414 2482 30 0 10 chr2 37329096 37329398 -215927185 - L1PA4 LINE L1 -2 6153 5855 2386 101 0 0 chr2 37329763 37330071 -215926512 - AluSx SINE Alu -4 308 1 1091 275 126 7 chr2 37330185 37330589 -215925994 + LTR33 LTR ERVL 68 519 -2 456 229 169 0 chr2 37330590 37330708 -215925875 + L2 LINE L2 2631 2768 -546 525 233 161 33 chr2 37330734 37330806 -215925777 - MER20B DNA MER1_type -7 776 715 2377 120 14 19 chr2 37330806 37331172 -215925411 + THE1B LTR MaLR 1 364 0 525 233 161 33 chr2 37331172 37331429 -215925154 - MER20B DNA MER1_type -68 715 405 812 252 161 3 chr2 37331438 37331724 -215924859 + LTR41 LTR ERVL 1 331 -442 364 268 6 76 chr2 37331724 37331881 -215924702 + LTR41 LTR ERVL 230 375 -398 201 39 0 0 chr2 37331881 37331907 -215924676 + (TG)n Simple_repeat Simple_repeat 2 27 0 1224 230 26 4 chr2 37331914 37332184 -215924399 - AluJo SINE Alu -36 276 1 834 242 92 64 chr2 37332187 37332580 -215924003 + LTR41 LTR ERVL 369 772 -1 583 209 50 22 chr2 37332581 37332763 -215923820 - MER20B DNA MER1_type -381 402 216 292 326 44 15 chr2 37332764 37332899 -215923684 + MER91C DNA MER1_type 1 139 -1 607 245 44 0 chr2 37332922 37333081 -215923502 - MER20B DNA MER1_type -582 201 36 471 184 0 0 chr2 37333223 37333364 -215923219 + (TA)n Simple_repeat Simple_repeat 1 141 0 195 69 0 0 chr2 37333369 37333398 -215923185 + (TC)n Simple_repeat Simple_repeat 2 30 0 270 160 0 0 chr2 37333398 37333448 -215923135 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 529 322 23 0 chr2 37333456 37333630 -215922953 - MIR SINE MIR -71 191 14 367 203 13 0 chr2 37333894 37333973 -215922610 + MLT1B LTR MaLR 34 113 -277 254 88 0 0 chr2 37333971 37334005 -215922578 + MLT1C LTR MaLR 434 467 0 * 6598 93 32 37 chr2 37334112 37335317 -215921266 - SVA Other Other -683 1386 382 547 189 33 25 chr2 37335434 37335556 -215921027 + L2 LINE L2 3189 3311 -2 191 330 54 27 chr2 37335860 37335972 -215920611 - MIR SINE MIR -50 212 98 2105 105 10 3 chr2 37336112 37336408 -215920175 + AluY SINE Alu 1 298 -13 303 289 253 5 chr2 37336940 37337130 -215919453 - MIR SINE MIR -16 246 10 207 280 0 0 chr2 37337642 37337692 -215918891 - L2 LINE L2 -1 3271 3222 260 343 118 0 chr2 37338584 37338686 -215917897 + MER91A DNA MER1_type 1 114 -82 21 36 0 0 chr2 37338900 37338928 -215917655 + AT_rich Low_complexity Low_complexity 1 28 0 34 24 0 0 chr2 37339230 37339271 -215917312 + AT_rich Low_complexity Low_complexity 1 41 0 513 269 104 22 chr2 37339313 37339495 -215917088 + MIR3 SINE MIR 1 197 -11 5103 174 29 15 chr2 37340003 37341468 -215915115 - L1MA9 LINE L1 0 7731 6242 3027 233 59 31 chr2 37341451 37341556 -215915027 - L1MA9 LINE L1 -3122 4443 4342 * 2169 41 41 61 chr2 37341556 37341849 -215914734 - AluY SINE Alu -20 291 5 3027 233 59 31 chr2 37341849 37343344 -215913239 - L1MA9 LINE L1 -3223 4342 2785 356 312 206 41 chr2 37343866 37344302 -215912281 - L2 LINE L2 -568 2746 2239 1791 155 0 21 chr2 37344497 37344813 -215911770 - AluJo SINE Alu 0 310 1 2328 106 3 0 chr2 37345276 37345588 -215910995 + AluSq SINE Alu 1 313 0 1283 160 0 63 chr2 37346990 37347033 -215909550 + AluJo SINE Alu 37 81 -231 2428 87 3 0 chr2 37347033 37347333 -215909250 + AluSp SINE Alu 1 301 -12 1283 160 0 63 chr2 37347333 37347526 -215909057 + AluJo SINE Alu 81 258 -54 23 0 0 0 chr2 37347530 37347553 -215909030 + AT_rich Low_complexity Low_complexity 1 23 0 607 106 34 28 chr2 37348315 37348494 -215908089 + (TA)n Simple_repeat Simple_repeat 1 180 0 1873 178 0 0 chr2 37348854 37349146 -215907437 + AluJo SINE Alu 1 292 -20 869 160 0 0 chr2 37349203 37349334 -215907249 + FLAM_C SINE Alu 1 131 -12 2594 114 27 41 chr2 37349771 37350209 -215906374 + MSTB1 LTR MaLR 1 432 0 808 252 122 28 chr2 37350760 37351121 -215905462 - L1ME3 LINE L1 -211 5951 5557 2214 119 7 3 chr2 37351319 37351621 -215904962 + AluSx SINE Alu 1 303 -9 2269 120 0 0 chr2 37352422 37352722 -215903861 + AluSq SINE Alu 1 300 -13 413 303 144 64 chr2 37352811 37353134 -215903449 + L2 LINE L2 2825 3189 -83 2198 113 7 0 chr2 37353134 37353426 -215903157 - AluSx SINE Alu -18 294 1 413 303 144 64 chr2 37353426 37353511 -215903072 + L2 LINE L2 3189 3266 -6 368 284 121 37 chr2 37353974 37354164 -215902419 + MIR SINE MIR 23 228 -34 1645 194 61 27 chr2 37354182 37354626 -215901957 + L1ME2 LINE L1 5696 6154 -10 1836 111 9 79 chr2 37354638 37354954 -215901629 - AluSx SINE Alu -18 294 1 2730 130 33 10 chr2 37355405 37355890 -215900693 + L1MB3 LINE L1 5686 6181 -2 745 124 0 0 chr2 37355948 37356061 -215900522 - AluSp/q SINE Alu -3 310 198 1813 136 7 34 chr2 37356130 37356424 -215900159 + AluJb SINE Alu 1 286 -26 1679 149 0 8 chr2 37356536 37356785 -215899798 - AluSq SINE Alu -66 247 1 433 241 74 54 chr2 37356794 37356997 -215899586 + L1MC4 LINE L1 7819 8025 -17 2470 85 0 0 chr2 37357146 37357451 -215899132 + AluSq SINE Alu 1 305 -8 198 0 0 0 chr2 37357616 37357638 -215898945 + (CA)n Simple_repeat Simple_repeat 1 22 0 296 244 35 17 chr2 37357722 37357870 -215898713 + (CATA)n Simple_repeat Simple_repeat 1 150 0 348 179 15 0 chr2 37357870 37357937 -215898646 - MER45 DNA AcHobo -3 1578 1511 307 257 43 0 chr2 37357929 37357999 -215898584 - MER45 DNA AcHobo -102 76 4 * 230 261 15 15 chr2 37357999 37358064 -215898519 + (TATG)n Simple_repeat Simple_repeat 2 66 0 472 218 59 96 chr2 37358253 37358389 -215898194 - L1MC5 LINE L1 -55 7906 7767 1712 177 0 7 chr2 37358389 37358660 -215897923 - AluJo SINE Alu -20 292 24 472 218 59 96 chr2 37358660 37359200 -215897383 - L1MC5 LINE L1 -194 7767 7260 471 217 212 29 chr2 37359193 37359446 -215897137 - L1MC4 LINE L1 -728 7233 6959 * 258 319 26 9 chr2 37359558 37359674 -215896909 - L2 LINE L2 -785 2529 2412 757 175 25 25 chr2 37360208 37360368 -215896215 - MLT1D LTR MaLR 0 505 346 2565 144 108 10 chr2 37360498 37361019 -215895564 - L1MB8 LINE L1 0 6178 5607 721 179 15 22 chr2 37361742 37361876 -215894707 - FLAM_A SINE Alu 0 133 1 198 0 0 0 chr2 37362250 37362272 -215894311 + (TC)n Simple_repeat Simple_repeat 2 23 0 * 282 56 0 0 chr2 37362271 37362307 -215894276 + (TA)n Simple_repeat Simple_repeat 1 36 0 2182 130 0 0 chr2 37362308 37362601 -215893982 - AluSx SINE Alu -19 293 1 27 49 0 0 chr2 37362601 37362642 -215893941 + AT_rich Low_complexity Low_complexity 1 41 0 445 219 163 0 chr2 37362750 37362873 -215893710 + MER5B DNA MER1_type 2 144 -34 230 246 15 31 chr2 37363254 37363319 -215893264 + L3 LINE CR1 573 636 -941 593 313 70 14 chr2 37363326 37363540 -215893043 + L3 LINE CR1 1341 1566 -11 1948 148 13 10 chr2 37365678 37365982 -215890601 - AluSx SINE Alu -7 305 1 1060 204 38 5 chr2 37366210 37366421 -215890162 + MER20 DNA MER1_type 1 218 -1 233 216 0 0 chr2 37366467 37366518 -215890065 + CT-rich Low_complexity Low_complexity 1 51 0 1662 105 4 4 chr2 37366687 37366916 -215889667 + AluSc SINE Alu 1 229 -80 213 175 16 16 chr2 37367017 37367080 -215889503 + (TA)n Simple_repeat Simple_repeat 2 64 0 648 294 56 36 chr2 37367153 37367490 -215889093 + MLT1I LTR MaLR 63 406 -3 442 314 71 35 chr2 37367491 37367862 -215888721 + L1MC4a LINE L1 4489 4884 -1262 1298 130 39 0 chr2 37367862 37368092 -215888491 - L1MB4 LINE L1 -2 6178 5940 442 314 71 35 chr2 37368092 37368211 -215888372 + L1MC4a LINE L1 4884 4997 -1149 2354 101 3 10 chr2 37368334 37368641 -215887942 + AluSq SINE Alu 2 306 -7 356 308 161 22 chr2 37368729 37369020 -215887563 + L1MC4a LINE L1 5259 5586 -2199 1183 153 0 110 chr2 37369194 37369448 -215887135 + AluJo SINE Alu 86 311 -1 319 205 0 24 chr2 37369469 37369552 -215887031 + L1MC4a LINE L1 5770 5850 -1958 2316 75 0 47 chr2 37370161 37370479 -215886104 - AluY SINE Alu -6 305 3 617 285 167 11 chr2 37370524 37370805 -215885778 + L3 LINE CR1 1242 1566 -11 2079 128 0 36 chr2 37370991 37371318 -215885265 - AluSx SINE Alu 0 312 1 957 167 39 0 chr2 37371342 37371498 -215885085 - AluJb SINE Alu -15 297 136 1964 144 3 3 chr2 37372049 37372361 -215884222 + AluSx SINE Alu 1 312 0 1773 177 13 0 chr2 37372375 37372674 -215883909 + AluJb SINE Alu 1 303 -9 1898 142 3 29 chr2 37373145 37373455 -215883128 + AluJb SINE Alu 1 302 -10 23 68 0 0 chr2 37374674 37374718 -215881865 + AT_rich Low_complexity Low_complexity 1 44 0 2242 97 10 0 chr2 37374718 37375008 -215881575 - AluSx SINE Alu -19 293 1 35 24 0 0 chr2 37375416 37375458 -215881125 + AT_rich Low_complexity Low_complexity 1 42 0 2198 34 45 8 chr2 37375510 37375778 -215880805 + AluY SINE Alu 33 310 -1 2050 147 0 3 chr2 37375923 37376222 -215880361 + AluSx SINE Alu 1 298 -14 2570 56 0 0 chr2 37376224 37376528 -215880055 + AluY SINE Alu 1 304 -7 183 319 77 33 chr2 37376681 37376772 -215879811 - L2 LINE L2 -37 3235 3141 180 0 0 0 chr2 37376860 37376880 -215879703 + (T)n Simple_repeat Simple_repeat 1 20 0 195 282 107 10 chr2 37377593 37377696 -215878887 + MIR SINE MIR 124 236 -26 1963 78 12 8 chr2 37378127 37378385 -215878198 + AluSg SINE Alu 1 259 -51 337 228 47 16 chr2 37378486 37378613 -215877970 + AluSc SINE Alu 164 294 -5 1860 158 7 10 chr2 37378968 37379265 -215877318 + AluJb SINE Alu 5 300 -12 2093 122 7 7 chr2 37379434 37379737 -215876846 - AluSc SINE Alu -5 304 2 2374 94 0 0 chr2 37380263 37380560 -215876023 - AluSc SINE Alu -12 297 1 185 91 0 30 chr2 37380862 37380895 -215875688 + (GGAA)n Simple_repeat Simple_repeat 2 33 0 222 294 22 33 chr2 37380978 37381070 -215875513 - MER5A DNA MER1_type -28 161 71 1884 103 65 17 chr2 37381076 37381368 -215875215 - AluSg SINE Alu -4 306 1 890 128 0 28 chr2 37382022 37382163 -215874420 - FLAM_C SINE Alu -6 137 1 22 56 0 0 chr2 37382299 37382335 -215874248 + AT_rich Low_complexity Low_complexity 1 36 0 1871 103 113 14 chr2 37382418 37382700 -215873883 + AluSg SINE Alu 1 310 0 767 313 90 36 chr2 37382840 37383454 -215873129 + L2 LINE L2 2463 3130 -142 2297 110 3 0 chr2 37383454 37383754 -215872829 - AluSx SINE Alu -11 301 1 767 313 90 36 chr2 37383754 37383891 -215872692 + L2 LINE L2 3130 3258 -14 395 131 16 0 chr2 37384380 37384441 -215872142 + LTR19A LTR ERV1 1 62 -424 30980 80 12 10 chr2 37384445 37385806 -215870777 + HERVFH19I LTR ERV1 1493 2851 -4868 1998 123 7 7 chr2 37385806 37386112 -215870471 - AluSx SINE Alu 0 306 1 30980 80 12 10 chr2 37386112 37388020 -215868563 + HERVFH19I LTR ERV1 2851 4773 -2946 2283 97 7 0 chr2 37388020 37388319 -215868264 + AluSg SINE Alu 1 301 -9 30980 80 12 10 chr2 37388319 37389458 -215867125 + HERVFH19I LTR ERV1 4773 5909 -1810 533 286 28 113 chr2 37390198 37390481 -215866102 + L2 LINE L2 3014 3272 0 242 241 27 80 chr2 37392731 37392843 -215863740 + L3 LINE CR1 391 496 -1081 579 319 91 25 chr2 37392999 37393360 -215863223 - LTR16B LTR ERVL -4 446 62 261 0 0 0 chr2 37393712 37393741 -215862842 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1502 179 15 101 chr2 37393799 37393846 -215862737 + MLT1B LTR MaLR 6 55 -335 2156 120 0 0 chr2 37393846 37394156 -215862427 + AluSx SINE Alu 1 310 0 1502 179 15 101 chr2 37394156 37394515 -215862068 + MLT1B LTR MaLR 55 378 -12 14820 36 8 1 chr2 37394960 37397529 -215859054 + L1PA4 LINE L1 3579 6155 0 739 122 0 0 chr2 37397665 37397772 -215858811 - AluSc SINE Alu -18 291 185 635 120 0 0 chr2 37397771 37397863 -215858720 - AluS SINE Alu -221 92 1 * 381 93 0 0 chr2 37398039 37398093 -215858490 + (CA)n Simple_repeat Simple_repeat 2 55 0 1883 131 4 0 chr2 37398093 37398367 -215858216 - AluSx SINE Alu -35 277 3 520 330 80 24 chr2 37398604 37398940 -215857643 + L3 LINE CR1 510 864 -713 201 243 0 0 chr2 37399050 37399087 -215857496 + (TG)n Simple_repeat Simple_repeat 2 38 0 571 358 156 7 chr2 37399337 37399767 -215856816 + L3 LINE CR1 1009 1502 -75 785 272 39 4 chr2 37399876 37400108 -215856475 - MLT1C LTR MaLR 0 467 228 564 219 63 40 chr2 37400167 37400367 -215856216 - MLT1C LTR MaLR -182 217 6 831 229 62 45 chr2 37401288 37401393 -215855190 + MLT1B LTR MaLR 6 108 -282 1910 181 0 0 chr2 37401393 37401691 -215854892 + AluSx SINE Alu 3 300 -12 831 229 62 45 chr2 37401691 37402032 -215854551 + MLT1B LTR MaLR 108 388 -2 486 248 129 50 chr2 37402034 37402441 -215854142 + MLT1C LTR MaLR 37 467 0 230 343 76 29 chr2 37403258 37403363 -215853220 - L2 LINE L2 -13 3259 3150 213 39 0 0 chr2 37403563 37403589 -215852994 + (TG)n Simple_repeat Simple_repeat 1 26 0 207 69 0 0 chr2 37403589 37403618 -215852965 + (GA)n Simple_repeat Simple_repeat 2 30 0 6746 223 35 30 chr2 37403942 37405678 -215850905 + L1MC1 LINE L1 3145 4897 -1249 2008 98 0 4 chr2 37405678 37405934 -215850649 + AluSx SINE Alu 44 298 -14 6746 223 35 30 chr2 37405934 37406370 -215850213 + L1MC1 LINE L1 4897 5329 -817 248 90 57 0 chr2 37406389 37406439 -215850144 + Alu SINE Alu 254 291 -11 4879 166 17 2 chr2 37406447 37407366 -215849217 + L1MC1 LINE L1 5325 6257 -76 2250 142 28 16 chr2 37407373 37407626 -215848957 + L1MB2 LINE L1 5742 6003 -168 1979 158 12 54 chr2 37407626 37408031 -215848552 - MLT1B LTR MaLR 0 390 3 2250 142 28 16 chr2 37408031 37408200 -215848383 + L1MB2 LINE L1 6003 6169 -2 379 284 10 36 chr2 37408243 37408437 -215848146 + L1MC/D LINE L1 1387 1575 -4965 976 169 0 0 chr2 37408469 37408652 -215847931 + L1MA4A LINE L1 6059 6241 -62 241 218 13 0 chr2 37408694 37408772 -215847811 + L1MA4A LINE L1 6225 6303 0 3341 241 50 35 chr2 37408783 37409293 -215847290 + L1MC/D LINE L1 4149 4650 -1890 306 0 0 0 chr2 37409293 37409327 -215847256 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 3341 241 50 35 chr2 37409327 37410050 -215846533 + L1MC/D LINE L1 4650 5401 -1139 1262 150 24 12 chr2 37410057 37410310 -215846273 + L1MC/D LINE L1 5699 5954 -799 222 37 0 0 chr2 37410471 37410498 -215846085 + (CATA)n Simple_repeat Simple_repeat 2 28 0 29 28 0 0 chr2 37410513 37410549 -215846034 + AT_rich Low_complexity Low_complexity 1 36 0 33 43 0 0 chr2 37410664 37410711 -215845872 + AT_rich Low_complexity Low_complexity 1 47 0 546 251 54 18 chr2 37412222 37412389 -215844194 + MER63A DNA MER1_type 38 210 0 201 244 0 0 chr2 37412409 37412450 -215844133 - L2 LINE L2 -7 3306 3266 2260 116 0 0 chr2 37413009 37413310 -215843273 - AluSx SINE Alu -11 301 1 481 168 138 78 chr2 37414264 37414456 -215842127 - L1MA10 LINE L1 -18 6295 6107 205 366 67 43 chr2 37416402 37416566 -215840017 - L2 LINE L2 -1 3271 3104 225 0 0 0 chr2 37416613 37416638 -215839945 + (CA)n Simple_repeat Simple_repeat 1 25 0 441 308 97 11 chr2 37417724 37417913 -215838670 - MIR SINE MIR -17 245 40 2069 135 39 39 chr2 37417949 37418313 -215838270 - THE1B LTR MaLR 0 364 1 342 0 0 0 chr2 37419404 37419442 -215837141 + (CA)n Simple_repeat Simple_repeat 2 39 0 240 386 79 16 chr2 37420368 37420495 -215836088 - L2 LINE L2 0 3272 3138 3158 125 17 23 chr2 37422655 37423119 -215833464 - L1PB4 LINE L1 -7 6149 5687 2258 113 7 0 chr2 37423119 37423428 -215833155 - AluSq SINE Alu -2 311 1 3158 125 17 23 chr2 37423428 37423491 -215833092 - L1PB4 LINE L1 -469 5687 5625 215 245 0 0 chr2 37424896 37424945 -215831638 - L3b LINE CR1 -241 1342 1294 216 371 28 28 chr2 37425742 37425885 -215830698 - MER5A DNA MER1_type 0 189 47 219 114 0 0 chr2 37426047 37426082 -215830501 + (CA)n Simple_repeat Simple_repeat 1 35 0 1338 216 24 27 chr2 37426086 37426415 -215830168 + L1MC4 LINE L1 5362 5689 -2119 1028 40 0 0 chr2 37426846 37426972 -215829611 - L1PA5 LINE L1 -6 6148 6023 24 0 0 0 chr2 37427106 37427130 -215829453 + AT_rich Low_complexity Low_complexity 1 24 0 3259 158 113 5 chr2 37427259 37427922 -215828661 - L1MA8 LINE L1 -2 6289 5555 364 244 47 0 chr2 37428042 37428128 -215828455 + L1MC4 LINE L1 6614 6703 -1339 345 300 0 0 chr2 37428066 37428156 -215828427 - L1MC4 LINE L1 -1339 6703 6614 * 317 299 34 54 chr2 37428888 37429035 -215827548 + MER5B DNA MER1_type 1 144 -34 243 263 0 0 chr2 37431285 37431342 -215825241 - L2 LINE L2 0 3313 3257 564 283 69 0 chr2 37431440 37431613 -215824970 + MER5A DNA MER1_type 2 186 -3 287 309 55 27 chr2 37432715 37432825 -215823758 + L2 LINE L2 3200 3312 -1 2054 127 7 10 chr2 37432880 37433180 -215823403 - AluSx SINE Alu -13 299 1 22 35 0 0 chr2 37433750 37433779 -215822804 + AT_rich Low_complexity Low_complexity 1 29 0 5684 114 19 2 chr2 37433889 37435195 -215821388 - L1PA16 LINE L1 -10 6156 4883 997 290 234 15 chr2 37435252 37436131 -215820452 + L2 LINE L2 2163 3309 -4 287 260 80 0 chr2 37436432 37436532 -215820051 - L1ME LINE L1 -468 5653 5546 662 136 8 0 chr2 37436778 37436896 -215819687 + (TGGA)n Simple_repeat Simple_repeat 4 122 0 237 310 212 18 chr2 37437718 37437831 -215818752 + MIR3 SINE MIR 8 142 -66 255 314 114 83 chr2 37439684 37439948 -215816635 + L2 LINE L2 2999 3270 -2 471 35 0 0 chr2 37440354 37440396 -215816187 + (CA)n Simple_repeat Simple_repeat 1 99 0 471 35 0 0 chr2 37440396 37440453 -215816130 + (CA)n Simple_repeat Simple_repeat 2 58 0 721 217 0 7 chr2 37440475 37440613 -215815970 - FRAM SINE Alu -29 147 11 519 330 61 57 chr2 37442062 37442520 -215814063 + L2 LINE L2 2375 2834 -480 463 277 14 35 chr2 37442994 37443135 -215813448 + MER5A DNA MER1_type 49 186 -3 361 324 39 100 chr2 37443139 37443500 -215813083 - L2 LINE L2 -1157 2157 1819 257 341 15 0 chr2 37443500 37443632 -215812951 + L1ME LINE L1 5725 5858 -304 35 63 0 0 chr2 37443696 37443759 -215812824 + AT_rich Low_complexity Low_complexity 1 63 0 1402 128 32 4 chr2 37443808 37444059 -215812524 + L1MA7 LINE L1 6034 6291 0 3243 257 38 61 chr2 37444225 37445289 -215811294 + L1M4 LINE L1 4 1042 -5817 1673 212 45 67 chr2 37445297 37446010 -215810573 + L1M4 LINE L1 1150 1858 -4997 1749 214 55 2 chr2 37446010 37446467 -215810116 + L1M4 LINE L1 5551 6031 -926 1274 132 59 14 chr2 37446467 37446686 -215809897 - Tigger1 DNA MER2_type -2188 230 2 626 240 35 6 chr2 37446696 37446867 -215809716 - MIR SINE MIR -42 220 45 191 268 70 28 chr2 37449787 37449858 -215806725 + MIR SINE MIR 51 124 -138 21 0 0 0 chr2 37450447 37450468 -215806115 + AT_rich Low_complexity Low_complexity 1 21 0 1882 147 0 36 chr2 37451029 37451336 -215805247 + AluJb SINE Alu 1 296 -16 197 268 18 0 chr2 37451943 37451999 -215804584 + L2 LINE L2 3216 3272 0 194 250 0 0 chr2 37452110 37452150 -215804433 - L2 LINE L2 0 3272 3233 447 359 80 44 chr2 37452158 37452523 -215804060 - L2 LINE L2 -18 3295 2918 955 195 96 53 chr2 37452674 37452956 -215803627 - L1ME1 LINE L1 -41 6125 5832 2988 143 24 44 chr2 37453023 37453570 -215803013 + L1MA9 LINE L1 5482 6017 -295 28 0 0 0 chr2 37453570 37453598 -215802985 + AT_rich Low_complexity Low_complexity 1 28 0 3694 150 5 5 chr2 37453631 37454236 -215802347 + MER6A DNA MER2_type 1 605 0 578 268 153 78 chr2 37454236 37454621 -215801962 - L2 LINE L2 -1031 2283 1870 2141 145 18 33 chr2 37454631 37455025 -215801558 + L1MC1 LINE L1 5927 6314 -19 1672 219 37 79 chr2 37455621 37456164 -215800419 - MLT2B1 LTR ERVL 0 520 1 2169 169 13 3 chr2 37456881 37457508 -215799075 + L1MC/D LINE L1 4969 5602 -731 4643 144 24 53 chr2 37457517 37458529 -215798054 + MER11C LTR ERVK 1 1071 0 706 157 0 9 chr2 37458529 37458644 -215797939 + L1MC/D LINE L1 5610 5723 -610 2334 118 8 30 chr2 37458644 37459016 -215797567 - THE1B LTR MaLR 0 364 1 3033 65 43 2 chr2 37459016 37459413 -215797170 - THE1B-int LTR MaLR 0 1580 1168 450 115 0 0 chr2 37459414 37459475 -215797108 - AluSp SINE Alu -126 187 127 768 168 0 0 chr2 37459476 37459601 -215796982 - AluJo/FLAM SINE Alu -177 125 1 227 189 0 19 chr2 37459705 37459758 -215796825 - MLT1I LTR MaLR -26 383 332 1227 198 80 0 chr2 37460292 37460555 -215796028 + L2 LINE L2 2258 2541 -773 2013 330 59 9 chr2 37460599 37461719 -215794864 - HERV16 LTR ERVL -1631 4023 2796 1263 214 18 59 chr2 37461720 37462157 -215794426 + MLT2B1 LTR ERVL 1 413 -1 271 293 95 17 chr2 37462225 37462307 -215794276 + MER45 DNA AcHobo 1437 1532 -49 3535 90 14 0 chr2 37462307 37462795 -215793788 - L1PA13 LINE L1 -19 6144 5650 271 293 95 17 chr2 37462795 37462828 -215793755 + MER45 DNA AcHobo 1532 1561 -20 615 309 34 19 chr2 37462950 37463270 -215793313 - HERV16 LTR ERVL -3762 1234 910 408 197 211 136 chr2 37464380 37464608 -215791975 + MIR SINE MIR 15 259 -3 229 410 63 9 chr2 37465574 37465796 -215790787 + MIR SINE MIR 5 238 -24 697 237 73 16 chr2 37468143 37468357 -215788226 - MIR SINE MIR -4 258 30 801 137 60 60 chr2 37470311 37470494 -215786089 + MER53 DNA DNA 1 183 -6 530 259 49 60 chr2 37470561 37470640 -215785943 + MER5A DNA MER1_type 1 79 -110 1729 185 34 0 chr2 37470640 37470937 -215785646 + AluJb SINE Alu 1 307 -5 1769 154 32 29 chr2 37470937 37471248 -215785335 + AluSx SINE Alu 1 312 0 530 259 49 60 chr2 37471248 37471352 -215785231 + MER5A DNA MER1_type 77 183 -6 507 201 345 0 chr2 37472302 37472496 -215784087 + MIR SINE MIR 2 262 0 362 309 11 53 chr2 37472631 37472819 -215783764 - MER5A DNA MER1_type -2 187 8 536 267 112 5 chr2 37473015 37473202 -215783381 - MIR SINE MIR 0 262 56 462 284 20 76 chr2 37473243 37473440 -215783143 - MER5A DNA MER1_type 0 189 4 501 229 0 134 chr2 37474291 37474492 -215782091 + MIR SINE MIR 87 260 -2 2124 135 140 8 chr2 37474559 37474937 -215781646 - MSTA LTR MaLR 0 428 1 666 138 132 53 chr2 37475913 37476083 -215780500 + MER63A DNA MER1_type 28 210 0 371 321 47 70 chr2 37476219 37476434 -215780149 + HAL1 LINE L1 1 210 -2297 193 313 35 97 chr2 37476558 37476702 -215779881 + L3 LINE CR1 1421 1555 -22 251 258 83 53 chr2 37477071 37477149 -215779434 - L2 LINE L2 -3 3310 3225 1655 163 39 20 chr2 37477149 37477455 -215779128 + AluJo SINE Alu 1 312 0 251 258 83 53 chr2 37477455 37477508 -215779075 - L2 LINE L2 -88 3225 3175 308 130 0 0 chr2 37478258 37478312 -215778271 + MER53 DNA DNA 29 82 -107 783 288 58 4 chr2 37478431 37478492 -215778091 + L2 LINE L2 3021 3077 -236 1933 123 13 40 chr2 37478492 37478793 -215777790 + AluSx SINE Alu 1 293 -19 783 288 58 4 chr2 37478793 37479009 -215777574 + L2 LINE L2 3077 3313 0 1961 136 58 17 chr2 37479459 37479819 -215776764 - THE1C LTR MaLR 0 375 1 226 222 0 0 chr2 37480547 37480592 -215775991 + GA-rich Low_complexity Low_complexity 1 45 0 1887 110 0 101 chr2 37480653 37480980 -215775603 + AluSx SINE Alu 1 294 -18 418 229 0 0 chr2 37481081 37481164 -215775419 + L2 LINE L2 3231 3313 0 2527 49 0 10 chr2 37482250 37482556 -215774027 + AluY SINE Alu 1 303 -8 346 274 35 44 chr2 37482557 37482670 -215773913 - L2 LINE L2 -19 3253 3142 21 36 0 0 chr2 37485013 37485041 -215771542 + AT_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr2 37485375 37485397 -215771186 + (CA)n Simple_repeat Simple_repeat 2 23 0 646 238 0 0 chr2 37485622 37485748 -215770835 + FLAM_C SINE Alu 1 126 -7 628 258 57 57 chr2 37485912 37486141 -215770442 - MER21B LTR ERV1 -362 501 273 420 291 28 50 chr2 37486211 37486352 -215770231 + L2 LINE L2 3127 3264 -8 22 0 0 0 chr2 37486355 37486377 -215770206 + AT_rich Low_complexity Low_complexity 1 22 0 236 367 33 0 chr2 37486647 37486737 -215769846 + MIR SINE MIR 58 150 -58 17236 180 28 13 chr2 37486753 37487436 -215769147 + L1P LINE L1 805 1476 -4670 2076 127 7 0 chr2 37487436 37487727 -215768856 + AluSg SINE Alu 1 293 -17 17236 180 28 13 chr2 37487727 37490811 -215765772 + L1P LINE L1 1476 4628 -1518 * 23348 96 7 15 chr2 37490810 37494386 -215762197 - L1P LINE L1 -2590 3556 11 793 120 73 7 chr2 37494393 37494543 -215762040 - MLT1A1 LTR MaLR -205 160 1 364 322 187 12 chr2 37495631 37496029 -215760554 - L2 LINE L2 -187 3085 2595 2220 110 30 0 chr2 37496033 37496332 -215760251 + AluSc SINE Alu 1 308 -1 666 328 96 37 chr2 37496690 37497147 -215759436 + L3 LINE CR1 1064 1547 -30 653 171 0 83 chr2 37497970 37498077 -215758506 + L1MA4 LINE L1 6124 6212 -88 2465 71 0 6 chr2 37498077 37498388 -215758195 + AluY SINE Alu 1 309 -2 653 171 0 83 chr2 37498388 37498461 -215758122 + L1MA4 LINE L1 6212 6289 -11 281 288 32 8 chr2 37498961 37499086 -215757497 + L1MB7 LINE L1 5520 5647 -665 431 196 26 0 chr2 37499292 37499445 -215757138 + (TA)n Simple_repeat Simple_repeat 1 157 0 23 33 0 0 chr2 37499579 37499609 -215756974 + AT_rich Low_complexity Low_complexity 1 30 0 7092 100 6 15 chr2 37501572 37502639 -215753944 + MER11C LTR ERVK 1 1057 -14 304 44 0 22 chr2 37503167 37503212 -215753371 + L1PA16 LINE L1 6109 6152 -14 23 0 0 0 chr2 37503445 37503468 -215753115 + AT_rich Low_complexity Low_complexity 1 23 0 351 0 0 0 chr2 37504379 37504418 -215752165 + (TG)n Simple_repeat Simple_repeat 2 40 0 7957 228 31 9 chr2 37504943 37507292 -215749291 + L1M4 LINE L1 2458 4859 -1287 901 179 21 16 chr2 37507305 37507495 -215749088 + L1MB7 LINE L1 5936 6126 -58 207 69 0 0 chr2 37507502 37507531 -215749052 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 207 333 111 12 chr2 37507552 37507723 -215748860 + L2 LINE L2 3122 3309 -4 211 254 16 16 chr2 37508186 37508249 -215748334 - L2 LINE L2 0 3313 3251 243 197 49 0 chr2 37508863 37508924 -215747659 + L1M4 LINE L1 4727 4790 -1356 698 210 36 30 chr2 37509360 37509527 -215747056 + MER5A DNA MER1_type 15 182 -7 483 320 81 72 chr2 37509915 37510542 -215746041 + L2 LINE L2 2638 3268 -4 3787 169 33 33 chr2 37511082 37511412 -215745171 - MER44D DNA MER2_type -1882 605 401 2249 104 16 0 chr2 37511412 37511719 -215744864 - AluSq SINE Alu -1 312 1 3787 169 33 33 chr2 37511719 37512121 -215744462 - MER44D DNA MER2_type -2085 402 1 219 244 0 0 chr2 37512201 37512246 -215744337 - MER91B DNA MER1_type -127 63 19 1505 269 27 48 chr2 37512344 37512984 -215743599 + MER20B DNA MER1_type 51 676 -107 282 160 10 20 chr2 37513018 37513118 -215743465 + (TA)n Simple_repeat Simple_repeat 1 99 0 344 202 77 10 chr2 37513146 37513250 -215743333 + MER20B DNA MER1_type 668 778 -5 521 244 9 0 chr2 37513453 37513568 -215743015 - Tigger7 DNA MER2_type -588 117 2 677 143 0 0 chr2 37513672 37513795 -215742788 - AluSg/x SINE Alu 0 307 185 526 348 119 26 chr2 37513813 37514267 -215742316 - L2 LINE L2 -1 3312 2817 366 123 0 0 chr2 37514352 37514409 -215742174 + (GGAA)n Simple_repeat Simple_repeat 2 58 0 290 382 65 0 chr2 37514607 37514730 -215741853 - L2 LINE L2 -3 3269 3139 345 47 0 0 chr2 37514878 37514921 -215741662 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 189 74 0 0 chr2 37514921 37514948 -215741635 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 674 311 27 0 chr2 37515019 37515202 -215741381 + MIR SINE MIR 10 197 -65 350 310 26 39 chr2 37515207 37515449 -215741134 - MLT1H LTR MaLR 0 549 312 269 68 23 0 chr2 37515686 37515730 -215740853 + (TA)n Simple_repeat Simple_repeat 1 45 0 208 237 34 51 chr2 37515739 37515798 -215740785 + MIR SINE MIR 205 262 0 662 330 53 4 chr2 37516057 37516284 -215740299 + MIR SINE MIR 25 262 0 709 186 27 66 chr2 37516323 37516506 -215740077 - MER5B DNA MER1_type 0 178 3 513 276 58 13 chr2 37516513 37516669 -215739914 - MIR3 SINE MIR -26 182 20 306 153 59 0 chr2 37517018 37517103 -215739480 + CT-rich Low_complexity Low_complexity 4 93 0 215 301 71 26 chr2 37518074 37518187 -215738396 - L3 LINE CR1 -875 702 585 309 308 76 17 chr2 37519158 37519395 -215737188 - L1ME4a LINE L1 -198 5923 5673 1371 175 32 20 chr2 37519402 37519653 -215736930 - AluJo SINE Alu -58 254 1 551 292 40 25 chr2 37519730 37520019 -215736564 - L1ME4a LINE L1 -526 5595 5346 334 209 39 78 chr2 37520172 37520325 -215736258 + MARNA DNA Mariner 415 561 -25 867 303 4 0 chr2 37520332 37520566 -215736017 + MIR SINE MIR 18 252 -10 2145 129 3 0 chr2 37520630 37520979 -215735604 - AluSq SINE Alu 0 313 1 2486 40 7 0 chr2 37520987 37521284 -215735299 - AluY SINE Alu -12 299 1 486 40 0 53 chr2 37521506 37521581 -215735002 - L1PA16 LINE L1 -1 6165 6095 209 359 68 44 chr2 37521963 37522169 -215734414 + MIR SINE MIR 47 257 -5 1379 149 0 5 chr2 37522596 37522804 -215733779 + AluJb SINE Alu 1 207 -105 819 117 17 28 chr2 37522811 37522990 -215733593 + GA-rich Low_complexity Low_complexity 4 180 0 272 155 0 17 chr2 37522985 37523043 -215733540 + G-rich Low_complexity Low_complexity 5 61 0 * 292 262 28 56 chr2 37523380 37523487 -215733096 + MIR3 SINE MIR 98 201 -7 347 294 31 37 chr2 37523919 37524082 -215732501 - MER104 DNA Tc2 -18 162 1 235 250 0 0 chr2 37524303 37524355 -215732228 - MIR SINE MIR -9 253 202 196 26 26 53 chr2 37524355 37524393 -215732190 + (TTTTTG)n Simple_repeat Simple_repeat 2 38 0 2239 115 0 13 chr2 37526084 37526389 -215730194 - AluSx SINE Alu -11 301 1 990 252 88 45 chr2 37526428 37526825 -215729758 - MLT1J2 LTR MaLR -18 432 19 539 325 114 19 chr2 37526933 37527309 -215729274 - MARNA DNA Mariner -55 531 120 21 36 0 0 chr2 37527815 37527843 -215728740 + AT_rich Low_complexity Low_complexity 1 28 0 445 244 133 82 chr2 37527959 37528471 -215728112 + L1ME4a LINE L1 5562 6099 -22 410 266 145 28 chr2 37528505 37528570 -215728013 + MIR SINE MIR 21 77 -185 1275 204 36 22 chr2 37528570 37528844 -215727739 - AluJb SINE Alu -30 282 5 410 266 145 28 chr2 37528844 37528992 -215727591 + MIR SINE MIR 77 259 -3 416 307 15 93 chr2 37529169 37529439 -215727144 + MIR SINE MIR 14 262 0 283 297 89 0 chr2 37529720 37529821 -215726762 - MIR SINE MIR -71 191 82 270 0 0 0 chr2 37529822 37529852 -215726731 + (GA)n Simple_repeat Simple_repeat 2 31 0 216 0 0 0 chr2 37529851 37529875 -215726708 + (TG)n Simple_repeat Simple_repeat 2 25 0 * 203 79 26 0 chr2 37530669 37530707 -215725876 + (CCCCCA)n Simple_repeat Simple_repeat 3 41 0 2310 99 0 40 chr2 37531990 37532314 -215724269 - AluSx SINE Alu -1 311 1 292 256 22 44 chr2 37532374 37532464 -215724119 - L3 LINE CR1 -6 1571 1484 302 290 141 85 chr2 37533752 37533984 -215722599 - L1M2 LINE L1 -5701 1148 931 192 40 0 0 chr2 37533984 37534009 -215722574 + (AGGGGG)n Simple_repeat Simple_repeat 6 30 0 302 290 141 85 chr2 37534009 37534342 -215722241 - L1M2 LINE L1 -5918 931 551 210 71 0 0 chr2 37534422 37534450 -215722133 + (GGA)n Simple_repeat Simple_repeat 1 28 0 29 113 0 0 chr2 37534501 37534642 -215721941 + GC_rich Low_complexity Low_complexity 1 141 0 22 0 0 0 chr2 37535325 37535347 -215721236 + GC_rich Low_complexity Low_complexity 1 22 0 2190 124 0 7 chr2 37541296 37541602 -215714981 + AluSx SINE Alu 1 304 -8 338 265 86 28 chr2 37541610 37541754 -215714829 + MIR SINE MIR 91 247 -15 180 225 0 0 chr2 37542449 37542489 -215714094 + MIR SINE MIR 160 199 -63 499 242 181 0 chr2 37542490 37542639 -215713944 - MER5A DNA MER1_type -2 187 12 394 329 40 28 chr2 37542990 37543189 -215713394 + MIR SINE MIR 4 202 -60 203 263 0 18 chr2 37543191 37543248 -215713335 + (TATG)n Simple_repeat Simple_repeat 1 56 0 29 0 0 0 chr2 37543269 37543298 -215713285 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 37543637 37543659 -215712924 + AT_rich Low_complexity Low_complexity 1 22 0 2210 97 21 0 chr2 37544117 37544406 -215712177 - AluSc SINE Alu -14 295 1 215 278 26 35 chr2 37545797 37545912 -215710671 + MIR SINE MIR 53 166 -96 22 0 0 0 chr2 37548580 37548602 -215707981 + AT_rich Low_complexity Low_complexity 1 22 0 225 255 0 0 chr2 37549775 37549822 -215706761 + L2 LINE L2 3263 3309 -4 644 256 83 33 chr2 37555813 37556055 -215700528 + MIR SINE MIR 9 262 0 229 281 0 0 chr2 37556570 37556627 -215699956 + L2 LINE L2 3216 3272 0 525 70 56 0 chr2 37557187 37557258 -215699325 - AluJ/FRAM SINE Alu -10 302 228 237 132 0 0 chr2 37558107 37558145 -215698438 + (T)n Simple_repeat Simple_repeat 1 38 0 1126 136 0 0 chr2 37560020 37560175 -215696408 + AluSg/x SINE Alu 136 290 -22 193 293 172 10 chr2 37561932 37562031 -215694552 - L2 LINE L2 0 3313 3199 216 338 52 58 chr2 37562111 37562265 -215694318 - L2 LINE L2 -266 3047 2895 931 298 71 15 chr2 37562265 37562658 -215693925 - L2 LINE L2 -5 3308 2894 313 239 0 0 chr2 37564221 37564288 -215692295 + MIR SINE MIR 195 261 -1 22 56 0 0 chr2 37564660 37564696 -215691887 + AT_rich Low_complexity Low_complexity 1 36 0 207 341 96 15 chr2 37564975 37565110 -215691473 - L2 LINE L2 0 3313 3168 354 292 139 14 chr2 37566186 37566467 -215690116 - L1M4 LINE L1 -2920 3226 2911 21 0 0 0 chr2 37566755 37566776 -215689807 + AT_rich Low_complexity Low_complexity 1 21 0 334 353 72 13 chr2 37566851 37567004 -215689579 - MIR3 SINE MIR -6 202 41 1996 146 7 0 chr2 37569189 37569490 -215687093 - AluSx SINE Alu -9 303 1 2480 65 7 3 chr2 37569499 37569808 -215686775 - AluY SINE Alu -1 310 1 1589 206 26 88 chr2 37570036 37570488 -215686095 + Charlie1a DNA MER1_type 1 424 -1031 241 266 0 16 chr2 37570488 37570552 -215686031 - L2 LINE L2 -971 2343 2281 257 209 15 0 chr2 37571847 37571914 -215684669 + (TA)n Simple_repeat Simple_repeat 2 69 0 449 316 122 38 chr2 37571997 37572490 -215684093 - L2 LINE L2 -181 3091 2549 223 270 20 20 chr2 37572932 37573032 -215683551 + (TATATG)n Simple_repeat Simple_repeat 6 105 0 1845 158 45 0 chr2 37573391 37573682 -215682901 - AluSx SINE Alu -8 304 1 1436 174 70 11 chr2 37574320 37574590 -215681993 - AluJo SINE Alu -26 286 1 187 200 0 0 chr2 37575859 37575894 -215680689 + MIR SINE MIR 48 82 -126 216 222 0 95 chr2 37576203 37576266 -215680317 - L3b LINE CR1 -3 1580 1524 210 375 85 48 chr2 37577430 37577947 -215678636 - L2 LINE L2 -384 2930 2395 401 318 70 5 chr2 37577947 37578148 -215678435 - L2 LINE L2 -1528 1786 1573 1753 295 173 22 chr2 37578161 37579258 -215677325 - L2 LINE L2 -1905 1409 147 273 319 0 0 chr2 37580204 37580273 -215676310 - L2 LINE L2 -5 3308 3240 984 319 141 18 chr2 37580520 37581282 -215675301 - L2 LINE L2 -129 3184 2329 332 251 137 34 chr2 37582135 37582310 -215674273 - L2 LINE L2 -896 2418 2226 222 222 0 0 chr2 37582920 37582965 -215673618 - L2 LINE L2 0 3272 3228 283 274 77 17 chr2 37583874 37583991 -215672592 - MER5A DNA MER1_type -57 132 9 219 329 0 0 chr2 37585597 37585670 -215670913 + (TA)n Simple_repeat Simple_repeat 2 74 0 22 0 0 0 chr2 37587689 37587711 -215668872 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr2 37590043 37590066 -215666517 + (TG)n Simple_repeat Simple_repeat 2 24 0 973 292 109 43 chr2 37592791 37593624 -215662959 - L2 LINE L2 0 3272 2370 2095 130 0 0 chr2 37594306 37594614 -215661969 + AluSx SINE Alu 1 308 0 244 289 91 64 chr2 37596435 37596622 -215659961 - L2 LINE L2 -1511 1803 1612 1557 174 67 0 chr2 37596685 37596967 -215659616 - AluJb SINE Alu -11 301 1 245 264 59 18 chr2 37597173 37597296 -215659287 + MIR SINE MIR 49 176 -32 458 281 251 15 chr2 37598626 37598825 -215657758 - MIR SINE MIR -2 260 15 183 296 19 0 chr2 37599037 37599091 -215657492 - L2 LINE L2 -251 3021 2967 934 294 30 11 chr2 37600206 37600573 -215656010 - MARNA DNA Mariner -165 421 48 451 227 170 41 chr2 37602148 37602342 -215654241 - MIR SINE MIR 0 262 44 232 361 48 0 chr2 37602438 37602521 -215654062 - L2 LINE L2 -30 3242 3156 263 326 41 10 chr2 37602704 37602802 -215653781 + L2 LINE L2 3161 3261 -11 181 263 30 50 chr2 37602809 37602908 -215653675 - L2 LINE L2 -272 3000 2904 450 96 0 48 chr2 37603169 37603252 -215653331 + L1MA4 LINE L1 6190 6268 -32 299 307 80 13 chr2 37603326 37603476 -215653107 - MIR3 SINE MIR -24 184 25 2433 103 0 0 chr2 37605301 37605611 -215650972 + AluSg SINE Alu 1 310 0 192 200 0 108 chr2 37605697 37605762 -215650821 + L3 LINE CR1 1345 1402 -175 281 292 22 11 chr2 37606584 37606673 -215649910 + MIR SINE MIR 41 130 -78 347 220 123 30 chr2 37607196 37607371 -215649212 + MLT1J LTR MaLR 1 157 -289 448 256 160 0 chr2 37608063 37608188 -215648395 + MER5A DNA MER1_type 2 146 -43 21 0 0 0 chr2 37610750 37610771 -215645812 + AT_rich Low_complexity Low_complexity 1 21 0 658 218 11 73 chr2 37611132 37611311 -215645272 - MER5B DNA MER1_type -9 169 2 931 202 17 6 chr2 37611325 37611503 -215645080 - MER5A DNA MER1_type -6 183 4 520 164 14 57 chr2 37611553 37611668 -215644915 - MER5A DNA MER1_type -77 112 4 853 232 0 17 chr2 37611932 37612113 -215644470 - MER5B DNA MER1_type 0 178 1 399 254 107 13 chr2 37612817 37613015 -215643568 + MIR SINE MIR 28 245 -17 252 382 37 0 chr2 37613203 37613339 -215643244 + L2 LINE L2 2921 3061 -252 183 42 0 0 chr2 37613711 37613735 -215642848 + (TG)n Simple_repeat Simple_repeat 1 24 0 603 76 0 0 chr2 37613978 37614057 -215642526 + MADE1 DNA Mariner 1 79 -1 2349 72 0 0 chr2 37615474 37615766 -215640817 + AluY SINE Alu 1 292 -19 426 315 191 16 chr2 37615768 37616019 -215640564 + L1 LINE L1 3643 3937 -2209 2309 110 0 0 chr2 37616232 37616533 -215640050 + AluSc SINE Alu 1 301 -8 558 248 87 7 chr2 37617188 37617337 -215639246 + MIR SINE MIR 20 180 -82 854 259 115 48 chr2 37617829 37618338 -215638245 + L2 LINE L2 2763 3298 -15 451 291 95 19 chr2 37618506 37618664 -215637919 + MIR3 SINE MIR 30 199 -9 204 125 0 0 chr2 37620608 37620640 -215635943 + (T)n Simple_repeat Simple_repeat 1 32 0 616 291 78 26 chr2 37622619 37622887 -215633696 + L3 LINE CR1 1294 1575 -2 196 273 18 0 chr2 37624723 37624778 -215631805 - L2 LINE L2 0 3313 3258 21 0 0 0 chr2 37625612 37625633 -215630950 + AT_rich Low_complexity Low_complexity 1 21 0 291 266 21 0 chr2 37625762 37625856 -215630727 - MLT1H LTR MaLR 0 549 454 520 265 38 2 chr2 37625974 37626149 -215630434 - MLT1H LTR MaLR -322 227 4 180 311 16 0 chr2 37627992 37628053 -215628530 + L3 LINE CR1 1513 1574 -3 191 366 70 0 chr2 37631814 37631885 -215624698 + L2 LINE L2 3148 3223 -49 342 357 95 58 chr2 37631982 37632276 -215624307 - L2 LINE L2 -12 3260 2956 198 71 0 0 chr2 37632749 37632777 -215623806 + (CA)n Simple_repeat Simple_repeat 1 28 0 183 383 0 17 chr2 37632906 37632966 -215623617 - L2 LINE L2 -2127 1187 1129 318 288 93 0 chr2 37632991 37633109 -215623474 + Charlie8 DNA MER1_type 26 154 -2263 214 325 136 35 chr2 37633270 37633639 -215622944 - L2 LINE L2 -2199 1115 710 733 291 42 17 chr2 37633688 37633929 -215622654 - MIR SINE MIR -3 259 13 216 294 93 48 chr2 37633982 37634251 -215622332 - L2 LINE L2 -2803 511 231 186 71 0 0 chr2 37635506 37635534 -215621049 + (TTTTA)n Simple_repeat Simple_repeat 5 32 0 800 95 35 0 chr2 37635537 37635653 -215620930 - L1PB1 LINE L1 -1 6150 6031 289 336 71 0 chr2 37637166 37637279 -215619304 - MIR3 SINE MIR -5 203 83 251 319 37 15 chr2 37637548 37637683 -215618900 - MER5A DNA MER1_type -1 188 51 * 325 280 25 45 chr2 37637565 37637722 -215618861 + MER5A DNA MER1_type 36 189 0 22 0 0 0 chr2 37637748 37637770 -215618813 + AT_rich Low_complexity Low_complexity 1 22 0 1690 132 22 4 chr2 37638666 37638939 -215617644 + L1MB7 LINE L1 5897 6174 -10 245 156 65 26 chr2 37640171 37640248 -215616335 + MER116 DNA Mariner 1 80 0 539 221 0 0 chr2 37640622 37640735 -215615848 + L1PB4 LINE L1 6031 6143 -13 507 285 19 32 chr2 37644044 37644202 -215612381 + MIR SINE MIR 2 157 -105 2382 77 0 3 chr2 37644267 37644566 -215612017 - AluY SINE Alu -13 298 1 316 344 72 0 chr2 37644964 37645089 -215611494 + L2 LINE L2 3133 3266 -6 251 293 0 0 chr2 37645744 37645819 -215610764 + (TA)n Simple_repeat Simple_repeat 2 76 0 8929 103 59 19 chr2 37648653 37650002 -215606581 + Tigger1 DNA MER2_type 893 2307 -111 1160 86 215 0 chr2 37650002 37650107 -215606476 + MER30 DNA MER1_type 1 82 -148 306 0 0 0 chr2 37650107 37650141 -215606442 + (CA)n Simple_repeat Simple_repeat 2 35 0 1160 86 215 0 chr2 37650141 37650221 -215606362 + MER30 DNA MER1_type 82 226 -4 8929 103 59 19 chr2 37650221 37650337 -215606246 + Tigger1 DNA MER2_type 2307 2417 -1 234 302 16 58 chr2 37651400 37651525 -215605058 + MIR SINE MIR 72 189 -67 5891 205 59 14 chr2 37651732 37652954 -215603629 - L1MB7 LINE L1 0 6184 5019 2038 126 34 7 chr2 37652954 37653247 -215603336 + AluSx SINE Alu 1 301 -11 5891 205 59 14 chr2 37653247 37654426 -215602157 - L1MB7 LINE L1 -1165 5019 3682 368 287 163 8 chr2 37654616 37654745 -215601838 + MIR SINE MIR 59 207 -55 183 156 0 0 chr2 37655084 37655116 -215601467 + T-rich Low_complexity Low_complexity 4 35 0 294 246 0 29 chr2 37656179 37656248 -215600335 - MIR SINE MIR -56 152 86 296 285 52 62 chr2 37659984 37660177 -215596406 - MIR SINE MIR -49 213 23 473 270 72 68 chr2 37661760 37662007 -215594576 - MIR SINE MIR -8 254 3 1032 288 50 30 chr2 37665683 37666187 -215590396 - MARNA DNA Mariner -30 556 43 384 297 30 6 chr2 37666044 37666209 -215590374 + MARNA DNA Mariner 397 565 -21 * 229 281 180 16 chr2 37668670 37668819 -215587764 - MIR SINE MIR -68 194 20 222 270 48 16 chr2 37669991 37670054 -215586529 - L2 LINE L2 -19 3294 3230 21 0 0 0 chr2 37670381 37670402 -215586181 + AT_rich Low_complexity Low_complexity 1 21 0 745 157 0 0 chr2 37671529 37671650 -215584933 + FLAM_C SINE Alu 23 143 0 22 35 0 0 chr2 37672229 37672258 -215584325 + AT_rich Low_complexity Low_complexity 1 29 0 201 108 0 0 chr2 37673840 37673877 -215582706 + (T)n Simple_repeat Simple_repeat 1 37 0 384 311 7 46 chr2 37676290 37676481 -215580102 + MIR3 SINE MIR 5 181 -61 670 298 83 5 chr2 37676644 37676862 -215579721 + MIR SINE MIR 4 238 -24 1359 305 156 48 chr2 37678037 37678425 -215578158 - L3 LINE CR1 -127 1450 1105 1549 197 0 17 chr2 37678425 37678719 -215577864 + AluJb SINE Alu 1 289 -23 1359 305 156 48 chr2 37678719 37679555 -215577028 - L3 LINE CR1 -472 1105 94 1913 168 0 10 chr2 37679817 37680127 -215576456 + AluJb SINE Alu 1 307 -5 219 381 0 0 chr2 37680905 37680989 -215575594 - L2 LINE L2 -1 3271 3188 686 236 52 48 chr2 37681599 37681828 -215574755 + MIR SINE MIR 4 233 -29 1726 174 3 14 chr2 37682260 37682554 -215574029 - AluJb SINE Alu -21 291 1 278 330 0 9 chr2 37683206 37683312 -215573271 + MIR3 SINE MIR 98 202 -6 1931 150 6 6 chr2 37683631 37683945 -215572638 - MER6 DNA MER2_type 0 865 552 * 3603 169 3 10 chr2 37683942 37684541 -215572042 - MER6 DNA MER2_type -57 808 214 198 0 0 0 chr2 37684541 37684563 -215572020 + (TC)n Simple_repeat Simple_repeat 1 22 0 1218 171 51 17 chr2 37684570 37684804 -215571779 - MER6 DNA MER2_type -623 242 1 1624 160 4 14 chr2 37685221 37685533 -215571050 - AluJo SINE Alu 0 317 9 187 308 111 26 chr2 37685806 37685923 -215570660 - L2 LINE L2 0 3272 3146 1767 148 7 43 chr2 37687620 37687924 -215568659 + AluSx SINE Alu 5 297 -15 1857 127 12 59 chr2 37689299 37689621 -215566962 - AluJb SINE Alu -5 307 1 195 69 0 0 chr2 37690226 37690255 -215566328 + (GGGA)n Simple_repeat Simple_repeat 4 32 0 189 107 0 0 chr2 37690257 37690285 -215566298 + (TGGG)n Simple_repeat Simple_repeat 2 29 0 205 333 29 29 chr2 37692164 37692269 -215564314 + MIR3 SINE MIR 82 186 -22 199 206 0 0 chr2 37693194 37693228 -215563355 + L3 LINE CR1 1534 1567 -10 280 243 92 76 chr2 37695208 37695354 -215561229 + MIR SINE MIR 88 250 -12 2389 103 0 0 chr2 37700900 37701211 -215555372 + AluSx SINE Alu 1 311 -1 1369 120 5 0 chr2 37701336 37701527 -215555056 - AluSg/x SINE Alu -13 299 108 629 194 14 58 chr2 37702433 37702572 -215554011 + MER94 DNA DNA 1 133 -1 259 50 100 0 chr2 37702816 37702856 -215553727 - L1PA13 LINE L1 -1 6162 6119 36 40 0 0 chr2 37705520 37705570 -215551013 + AT_rich Low_complexity Low_complexity 1 50 0 23 33 0 0 chr2 37705775 37705805 -215550778 + AT_rich Low_complexity Low_complexity 1 30 0 418 282 62 48 chr2 37706268 37706477 -215550106 + MIR SINE MIR 9 220 -42 208 353 15 0 chr2 37709302 37709370 -215547213 + L2 LINE L2 3203 3271 -42 802 289 46 43 chr2 37710369 37710719 -215545864 - MARNA DNA Mariner -224 362 12 649 260 75 35 chr2 37711065 37711292 -215545291 + MIR SINE MIR 27 262 0 1537 174 27 54 chr2 37711697 37711991 -215544592 + AluJo SINE Alu 11 296 -16 591 162 15 49 chr2 37712317 37712784 -215543799 + GA-rich Low_complexity Low_complexity 1 451 0 538 145 31 49 chr2 37712799 37713128 -215543455 + GA-rich Low_complexity Low_complexity 1 323 0 634 171 28 17 chr2 37713460 37713636 -215542947 + GA-rich Low_complexity Low_complexity 2 179 0 1193 124 60 35 chr2 37714206 37714407 -215542176 - MER2 DNA MER2_type -139 206 1 2276 265 133 50 chr2 37717317 37718684 -215537899 - L2 LINE L2 -2 3311 1810 202 284 83 55 chr2 37719471 37719580 -215537003 + MIR SINE MIR 25 136 -72 268 251 123 16 chr2 37719774 37719896 -215536687 - MIR SINE MIR -60 148 40 368 270 110 0 chr2 37720585 37720685 -215535898 + L2 LINE L2 3159 3269 -3 304 270 120 30 chr2 37721239 37721339 -215535244 + MER5A DNA MER1_type 81 189 0 428 226 57 38 chr2 37721527 37721633 -215534950 + MIR SINE MIR 28 135 -127 296 217 83 0 chr2 37723745 37723805 -215532778 - L2 LINE L2 0 3313 3249 243 0 0 0 chr2 37725144 37725171 -215531412 + (T)n Simple_repeat Simple_repeat 1 27 0 189 402 36 9 chr2 37726268 37726380 -215530203 - L3 LINE CR1 -5 1572 1458 398 280 271 15 chr2 37726508 37726847 -215529736 - L3 LINE CR1 -159 1418 993 218 136 23 0 chr2 37728208 37728252 -215528331 + (TA)n Simple_repeat Simple_repeat 2 46 0 306 87 0 0 chr2 37728402 37728448 -215528135 + (TG)n Simple_repeat Simple_repeat 1 46 0 29 0 0 0 chr2 37728918 37728947 -215527636 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr2 37729270 37729295 -215527288 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr2 37730056 37730081 -215526502 + AT_rich Low_complexity Low_complexity 1 25 0 21 57 0 0 chr2 37734160 37734195 -215522388 + AT_rich Low_complexity Low_complexity 1 35 0 866 254 9 14 chr2 37734930 37735143 -215521440 + MIR SINE MIR 30 241 -21 26 30 0 0 chr2 37735170 37735203 -215521380 + AT_rich Low_complexity Low_complexity 1 33 0 217 223 268 62 chr2 37735580 37735692 -215520891 + MIR3 SINE MIR 33 167 -41 25 31 0 0 chr2 37735734 37735766 -215520817 + AT_rich Low_complexity Low_complexity 1 32 0 536 223 0 16 chr2 37736236 37736357 -215520226 + L2 LINE L2 3195 3313 0 1266 183 144 49 chr2 37740286 37740750 -215515833 + Charlie1b DNA MER1_type 1 521 -2 28 29 0 0 chr2 37741184 37741219 -215515364 + AT_rich Low_complexity Low_complexity 1 35 0 186 43 0 0 chr2 37741895 37741918 -215514665 + (A)n Simple_repeat Simple_repeat 1 23 0 274 196 18 0 chr2 37742485 37742541 -215514042 + MIR SINE MIR 202 258 -4 314 262 16 57 chr2 37742803 37742925 -215513658 - L2 LINE L2 -38 3275 3159 275 400 65 29 chr2 37743526 37743939 -215512644 + L2 LINE L2 2532 2959 -355 803 224 18 70 chr2 37744126 37744354 -215512229 - MER20 DNA MER1_type -3 216 1 1927 57 0 0 chr2 37744504 37744734 -215511849 + AluY SINE Alu 66 295 -16 491 306 67 6 chr2 37745086 37745266 -215511317 + MIR3 SINE MIR 14 204 -4 201 133 0 0 chr2 37745308 37745338 -215511245 + (CA)n Simple_repeat Simple_repeat 2 31 0 214 301 84 0 chr2 37745458 37745541 -215511042 + L2 LINE L2 3168 3257 -15 2438 80 0 0 chr2 37745860 37746160 -215510423 + AluSx SINE Alu 1 300 -12 255 338 0 0 chr2 37746530 37746604 -215509979 + G-rich Low_complexity Low_complexity 3 76 0 22 35 0 0 chr2 37746722 37746751 -215509832 + AT_rich Low_complexity Low_complexity 1 29 0 498 259 13 44 chr2 37747467 37747625 -215508958 + MIR SINE MIR 110 262 0 26 0 0 0 chr2 37748421 37748447 -215508136 + AT_rich Low_complexity Low_complexity 1 26 0 23 92 0 0 chr2 37748748 37748813 -215507770 + AT_rich Low_complexity Low_complexity 1 65 0 1985 161 26 23 chr2 37748926 37749273 -215507310 - MER7A DNA MER2_type 0 346 1 2017 111 21 0 chr2 37749759 37750047 -215506536 + AluSx SINE Alu 1 294 -18 2218 100 0 28 chr2 37750104 37750425 -215506158 + AluSx SINE Alu 1 312 0 1101 229 9 22 chr2 37750859 37751086 -215505497 - MER58A DNA MER1_type 0 224 1 187 383 149 7 chr2 37751931 37752072 -215504511 - L2 LINE L2 -8 3264 3104 290 220 0 0 chr2 37752447 37752506 -215504077 - L2 LINE L2 -974 2340 2282 509 246 16 91 chr2 37753391 37753578 -215503005 + L2 LINE L2 3081 3246 -67 1525 181 49 17 chr2 37753578 37753865 -215502718 - AluJo SINE Alu -12 300 5 509 246 16 91 chr2 37753865 37753929 -215502654 + L2 LINE L2 3246 3313 0 2444 76 0 3 chr2 37754650 37754951 -215501632 - AluSx SINE Alu -12 300 1 2359 75 14 0 chr2 37755642 37755934 -215500649 - AluSp SINE Alu -17 296 1 2294 143 87 3 chr2 37757747 37758138 -215498445 + MSTA LTR MaLR 1 424 -4 1994 137 63 6 chr2 37758229 37758564 -215498019 + MLT1B LTR MaLR 37 390 0 1169 118 39 49 chr2 37759083 37759251 -215497332 + MLT1B LTR MaLR 3 170 -220 2025 119 20 3 chr2 37759251 37759546 -215497037 + AluSq SINE Alu 1 300 -13 1169 118 39 49 chr2 37759546 37759581 -215497002 + MLT1B LTR MaLR 170 204 -186 23 0 0 0 chr2 37760328 37760351 -215496232 + AT_rich Low_complexity Low_complexity 1 23 0 1154 279 63 18 chr2 37762410 37762808 -215493775 + LTR33 LTR ERVL 37 452 -69 1916 239 137 56 chr2 37763422 37764445 -215492138 + HAL1 LINE L1 1394 2499 -8 21 57 0 0 chr2 37764695 37764730 -215491853 + AT_rich Low_complexity Low_complexity 1 35 0 1992 129 28 0 chr2 37764737 37765024 -215491559 + AluJb SINE Alu 5 299 -13 1612 155 7 25 chr2 37765051 37765328 -215491255 + AluJo SINE Alu 13 284 -28 2437 80 3 0 chr2 37766409 37766708 -215489875 - AluSx SINE Alu -12 300 1 1130 164 51 0 chr2 37766865 37767060 -215489523 + MER2 DNA MER2_type 1 205 -140 22 56 0 0 chr2 37767381 37767417 -215489166 + AT_rich Low_complexity Low_complexity 1 36 0 210 262 195 27 chr2 37767466 37767615 -215488968 - L2 LINE L2 0 3272 3099 568 335 11 6 chr2 37767716 37767892 -215488691 + L3 LINE CR1 1400 1576 -1 1898 107 85 0 chr2 37768777 37769048 -215487535 + AluSx SINE Alu 2 295 -17 770 219 6 6 chr2 37769657 37769821 -215486762 - MIR SINE MIR -27 235 72 224 365 83 22 chr2 37770100 37770281 -215486302 + MIR3 SINE MIR 3 194 -14 1030 51 0 0 chr2 37770655 37770772 -215485811 - L1PA10 LINE L1 -8 6160 6044 1706 148 6 35 chr2 37770908 37771225 -215485358 + AluJo SINE Alu 5 312 0 1472 78 10 0 chr2 37771473 37771666 -215484917 - THE1A LTR MaLR 0 355 161 7914 91 5 4 chr2 37771666 37772718 -215483865 - THE1A-int LTR MaLR -527 1053 1 3080 59 3 0 chr2 37772718 37773072 -215483511 - THE1A LTR MaLR 0 355 1 2958 126 52 2 chr2 37773561 37774005 -215482578 - MER1A DNA MER1_type -62 467 2 1464 177 3 41 chr2 37774850 37775144 -215481439 - AluJb SINE Alu -25 287 5 426 327 75 66 chr2 37775569 37775918 -215480665 + L2 LINE L2 2921 3272 0 305 285 115 79 chr2 37776178 37776678 -215479905 + L1M2 LINE L1 663 1162 -5687 203 274 97 0 chr2 37777023 37777085 -215479498 + MIR SINE MIR 191 258 -4 861 116 41 14 chr2 37777187 37777334 -215479249 + L1MB3 LINE L1 6033 6183 0 1029 116 0 0 chr2 37777342 37777480 -215479103 + AluSq/x SINE Alu 1 138 -175 1590 138 127 75 chr2 37777480 37777906 -215478677 + LTR7 LTR ERV1 1 448 -2 19391 102 37 11 chr2 37777908 37780820 -215475763 + HERVH LTR ERV1 1 2987 -4726 880 149 20 0 chr2 37780814 37780962 -215475621 + HERVH LTR ERV1 3140 3290 -4423 * 3239 102 6 6 chr2 37780952 37781454 -215475129 + HERVH LTR ERV1 3492 3993 -3720 3986 153 3 1 chr2 37781456 37782117 -215474466 + HERVH LTR ERV1 4488 5149 -2564 1303 129 18 5 chr2 37782118 37782335 -215474248 + HERVH LTR ERV1 5600 5819 -1894 2376 71 45 13 chr2 37782335 37782713 -215473870 + HERVH LTR ERV1 7324 7713 0 1513 144 110 65 chr2 37782713 37783142 -215473441 + LTR7 LTR ERV1 1 448 -2 1537 65 0 0 chr2 37783175 37783360 -215473223 - AluY SINE Alu -126 185 1 2136 181 20 13 chr2 37785386 37785779 -215470804 - MSTD LTR MaLR 0 396 1 1013 166 18 12 chr2 37786127 37786290 -215470293 + FRAM SINE Alu 1 158 -18 2053 129 13 3 chr2 37787334 37787643 -215468940 + AluSx SINE Alu 1 312 0 1768 174 22 82 chr2 37788541 37788668 -215467915 + MLT1B LTR MaLR 1 134 -256 1895 115 6 88 chr2 37788668 37789008 -215467575 + AluSx SINE Alu 1 312 0 1768 174 22 82 chr2 37789008 37789295 -215467288 + MLT1B LTR MaLR 134 390 0 359 234 32 0 chr2 37792947 37793041 -215463542 + MER69 DNA AcHobo 1 97 -2429 577 215 35 0 chr2 37793045 37793189 -215463394 + MER69 DNA AcHobo 1941 2089 -437 1887 165 60 3 chr2 37793207 37793577 -215463006 - MER57A LTR ERV1 -3 400 10 482 209 45 8 chr2 37794108 37794242 -215462341 + MER69 DNA AcHobo 2118 2256 -270 738 141 0 16 chr2 37794248 37794369 -215462214 + AluJb SINE Alu 192 310 -2 2093 100 13 72 chr2 37794407 37794756 -215461827 - MER4E LTR ERV1 0 779 454 2191 109 7 13 chr2 37794756 37795059 -215461524 + AluSq SINE Alu 1 301 -12 2093 100 13 72 chr2 37795059 37795099 -215461484 - MER4E LTR ERV1 -325 454 413 3021 144 50 11 chr2 37795101 37795662 -215460921 - MER4D LTR ERV1 -320 583 1 722 202 121 9 chr2 37795662 37795884 -215460699 + MER69 DNA AcHobo 2279 2525 -1 2260 136 41 37 chr2 37795965 37796106 -215460477 - LTR23 LTR ERV1 0 437 298 2257 84 3 62 chr2 37796106 37796428 -215460155 - AluSp SINE Alu -10 303 1 2260 136 41 37 chr2 37796428 37796721 -215459862 - LTR23 LTR ERV1 -139 298 1 968 280 66 26 chr2 37796860 37797239 -215459344 + MLT1J2 LTR MaLR 45 438 -12 1813 119 85 58 chr2 37797439 37797767 -215458816 + MER1B DNA MER1_type 1 337 0 357 314 93 23 chr2 37797820 37797992 -215458591 + L3 LINE CR1 1377 1560 -17 2171 132 5 57 chr2 37798118 37798242 -215458341 + MSTC LTR MaLR 48 177 -251 2337 101 0 3 chr2 37798242 37798548 -215458035 + AluSx SINE Alu 2 306 -6 2171 132 5 57 chr2 37798548 37798825 -215457758 + MSTC LTR MaLR 177 428 0 206 234 0 21 chr2 37799891 37799938 -215456645 + GA-rich Low_complexity Low_complexity 1 46 0 621 226 48 12 chr2 37800939 37801107 -215455476 + MER58B DNA MER1_type 168 341 0 23 33 0 0 chr2 37801460 37801490 -215455093 + AT_rich Low_complexity Low_complexity 1 30 0 32 26 0 0 chr2 37801565 37801604 -215454979 + AT_rich Low_complexity Low_complexity 1 39 0 876 102 75 14 chr2 37802286 37802433 -215454150 + L1PA15 LINE L1 6004 6159 -6 323 256 125 22 chr2 37802449 37802644 -215453939 + L1M4 LINE L1 5209 5421 -756 1746 178 0 14 chr2 37802649 37802936 -215453647 + AluJo SINE Alu 11 293 -19 450 264 77 48 chr2 37802974 37803284 -215453299 - L1M4 LINE L1 -1095 5051 4733 2301 99 3 0 chr2 37803347 37803640 -215452943 - AluSg SINE Alu -16 294 1 1762 189 111 119 chr2 37803690 37804144 -215452439 - LTR8A LTR ERV1 -2 725 278 1190 21 0 0 chr2 37804144 37804284 -215452299 + L1PA2 LINE L1 6016 6155 0 1762 189 111 119 chr2 37804284 37804560 -215452023 - LTR8A LTR ERV1 -449 278 1 7263 170 83 45 chr2 37804562 37806690 -215449893 - HUERS-P1 LTR ERV1 -1 6262 3813 1267 191 0 9 chr2 37806708 37806928 -215449655 - AluJo SINE Alu -12 300 83 2801 135 2 22 chr2 37806928 37807425 -215449158 - HUERS-P1 LTR ERV1 -1614 3266 2780 3140 100 46 28 chr2 37807429 37807626 -215448957 + MER4B LTR ERV1 4 196 -583 2417 70 0 0 chr2 37807626 37807925 -215448658 + AluY SINE Alu 1 299 -12 3140 100 46 28 chr2 37807925 37808326 -215448257 + MER4B LTR ERV1 196 778 -1 2976 159 20 50 chr2 37808327 37809059 -215447524 - MER41-int LTR ERV1 -2654 3292 1843 267 140 20 0 chr2 37809109 37809159 -215447424 - MER34C LTR ERV1 -366 219 169 773 194 0 26 chr2 37809159 37809314 -215447269 - MER41-int LTR ERV1 -3225 2721 2571 2952 112 142 18 chr2 37809314 37809877 -215446706 + LTR10E LTR ERV1 1 633 0 4366 181 42 69 chr2 37809878 37810555 -215446028 - MER41-int LTR ERV1 -3439 2507 1813 2222 110 10 0 chr2 37810555 37810855 -215445728 - AluSx SINE Alu -9 303 1 4366 181 42 69 chr2 37810855 37811560 -215445023 - MER41-int LTR ERV1 -4133 1813 912 5387 116 22 14 chr2 37811560 37813050 -215443533 - L1PA16 LINE L1 -3 6163 4708 4366 181 42 69 chr2 37813050 37813192 -215443391 - MER41-int LTR ERV1 -5034 912 768 941 210 7 21 chr2 37813189 37813495 -215443088 - MER41-int LTR ERV1 -4466 1480 355 * 225 81 54 0 chr2 37813499 37813536 -215443047 - L1M4 LINE L1 -441 5733 5695 * 473 61 0 0 chr2 37813503 37813569 -215443014 - L1P4 LINE L1 -439 5727 5662 3472 214 50 43 chr2 37813572 37814523 -215442060 - MER41-int LTR ERV1 -4832 1431 474 1588 175 102 57 chr2 37814877 37815299 -215441284 - LTR8A LTR ERV1 0 727 287 14014 138 25 9 chr2 37815348 37817109 -215439474 + L1MA3 LINE L1 769 2579 -4986 3122 74 36 2 chr2 37817109 37817556 -215439027 + L1PA13 LINE L1 5696 6157 -6 14014 138 25 9 chr2 37817556 37818169 -215438414 + L1MA3 LINE L1 2579 3181 -4384 1321 201 25 11 chr2 37818177 37818451 -215438132 + AluJb SINE Alu 9 286 -26 15138 141 29 22 chr2 37818464 37818782 -215437801 + L1MA3 LINE L1 3168 3482 -4242 2155 113 17 10 chr2 37818782 37819084 -215437499 + AluSx SINE Alu 1 304 -8 15138 141 29 22 chr2 37819084 37819112 -215437471 + L1MA3 LINE L1 3482 3508 -4216 240 86 0 0 chr2 37819112 37819147 -215437436 + (CA)n Simple_repeat Simple_repeat 2 36 0 15138 141 29 22 chr2 37819147 37819501 -215437082 + L1MA3 LINE L1 3508 3858 -3866 408 55 0 0 chr2 37819501 37819556 -215437027 + (TA)n Simple_repeat Simple_repeat 1 55 0 15138 141 29 22 chr2 37819556 37821006 -215435577 + L1MA3 LINE L1 3858 5296 -2428 234 0 0 0 chr2 37821006 37821032 -215435551 + (CAA)n Simple_repeat Simple_repeat 2 27 0 15138 141 29 22 chr2 37821032 37823381 -215433202 + L1MA3 LINE L1 5296 7716 -8 461 211 55 45 chr2 37823383 37823542 -215433041 - LTR8 LTR ERV1 -387 154 1 269 170 0 0 chr2 37823583 37823630 -215432953 + L1ME LINE L1 5544 5590 -531 2473 34 20 7 chr2 37823913 37824207 -215432376 + AluY SINE Alu 1 298 -13 261 314 41 8 chr2 37824213 37824334 -215432249 - LTR33A LTR ERVL -102 421 297 255 267 156 0 chr2 37824471 37824561 -215432022 - LTR33A LTR ERVL -361 162 59 22 80 0 0 chr2 37824647 37824697 -215431886 + AT_rich Low_complexity Low_complexity 1 50 0 678 303 76 16 chr2 37824798 37825115 -215431468 + MLT1I LTR MaLR 74 409 0 725 188 23 0 chr2 37825313 37825446 -215431137 + Tigger3(Golem) DNA MER2_type 1 136 -2893 4634 133 50 12 chr2 37825456 37826290 -215430293 + Tigger3(Golem) DNA MER2_type 2163 3028 -1 223 197 79 26 chr2 37826293 37826369 -215430214 + MIR SINE MIR 183 262 0 2066 144 71 9 chr2 37827129 37827523 -215429060 - MSTB1 LTR MaLR -21 411 1 1956 137 7 13 chr2 37827554 37827883 -215428700 - AluSx SINE Alu 0 312 1 375 248 120 0 chr2 37828992 37829109 -215427474 - MIR SINE MIR -14 248 118 337 296 65 69 chr2 37829299 37829468 -215427115 + L1MC/D LINE L1 5556 5725 -2083 1626 187 3 38 chr2 37829468 37829784 -215426799 + AluJb SINE Alu 1 305 -7 337 296 65 69 chr2 37829784 37829874 -215426709 + L1MC/D LINE L1 5725 5814 -1994 466 365 108 8 chr2 37830403 37830773 -215425810 + HAL1b LINE L1 429 835 -513 2465 217 83 39 chr2 37830773 37831612 -215424971 + L1ME2 LINE L1 4992 5889 -275 1478 201 14 21 chr2 37831612 37831895 -215424688 + AluJo SINE Alu 21 301 -11 2465 217 83 39 chr2 37831895 37832174 -215424409 + L1ME2 LINE L1 5889 6154 -10 453 305 16 56 chr2 37832747 37832996 -215423587 + L1M4 LINE L1 2154 2392 -3754 335 257 46 0 chr2 37833002 37833111 -215423472 + MER3 DNA MER1_type 43 156 -53 2268 101 0 22 chr2 37833476 37833793 -215422790 + AluSx SINE Alu 1 310 -2 1714 181 86 0 chr2 37835595 37835932 -215420651 - MER47A DNA MER2_type 0 366 1 244 242 16 16 chr2 37836471 37836533 -215420050 - L2 LINE L2 -1 3271 3210 495 243 52 37 chr2 37836994 37837130 -215419453 + MIR3 SINE MIR 33 170 -38 540 305 176 0 chr2 37837475 37837685 -215418898 - MIR SINE MIR -5 257 11 221 136 0 23 chr2 37837719 37837763 -215418820 + (GGGA)n Simple_repeat Simple_repeat 1 43 0 28 61 0 0 chr2 37837792 37837841 -215418742 + AT_rich Low_complexity Low_complexity 1 49 0 3673 151 39 5 chr2 37838937 37839607 -215416976 - L1MB2 LINE L1 -39 6132 5440 1699 222 35 61 chr2 37839734 37840029 -215416554 + L1ME3 LINE L1 5587 5888 -274 1868 164 0 13 chr2 37840029 37840327 -215416256 + AluJb SINE Alu 1 294 -18 1699 222 35 61 chr2 37840327 37840366 -215416217 + L1ME3 LINE L1 5888 5926 -236 1713 156 51 27 chr2 37840366 37840700 -215415883 + MER2 DNA MER2_type 1 342 -2 1699 222 35 61 chr2 37840700 37840935 -215415648 + L1ME3 LINE L1 5926 6142 -20 204 40 0 0 chr2 37841037 37841062 -215415521 + (A)n Simple_repeat Simple_repeat 1 25 0 688 138 0 48 chr2 37841139 37841284 -215415299 + SVA Other Other 424 561 -825 1002 273 109 35 chr2 37842094 37842781 -215413802 + L2 LINE L2 2572 3303 -10 381 273 10 10 chr2 37843237 37843336 -215413247 + MER58 DNA MER1_type 1 99 -116 240 35 0 0 chr2 37843337 37843366 -215413217 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 353 192 27 0 chr2 37843372 37843445 -215413138 + MER58 DNA MER1_type 2346 2420 0 398 338 46 27 chr2 37843783 37844046 -215412537 + MLT1J LTR MaLR 1 268 -243 298 264 23 0 chr2 37844310 37844397 -215412186 - MER58C DNA MER1_type -10 205 117 337 148 30 1 chr2 37844579 37844648 -215411935 - MER58 DNA MER1_type -10 2410 2342 216 0 0 0 chr2 37844648 37844672 -215411911 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4502 147 28 33 chr2 37844758 37845006 -215411577 + L1MA9 LINE L1 5433 5681 -631 1653 149 36 29 chr2 37845006 37845281 -215411302 - AluJo SINE Alu -35 277 1 4502 147 28 33 chr2 37845281 37845770 -215410813 + L1MA9 LINE L1 5681 6168 -144 378 0 0 0 chr2 37845770 37845812 -215410771 + (CA)n Simple_repeat Simple_repeat 1 42 0 4502 147 28 33 chr2 37845812 37845952 -215410631 + L1MA9 LINE L1 6168 6307 -5 670 313 48 57 chr2 37846157 37846835 -215409748 - L2 LINE L2 -1 3271 2599 276 309 88 29 chr2 37846841 37847181 -215409402 - L1M4 LINE L1 -1300 4846 4487 2021 109 12 70 chr2 37847281 37847611 -215408972 - AluSx SINE Alu -1 311 1 201 39 0 0 chr2 37848113 37848139 -215408444 + (CA)n Simple_repeat Simple_repeat 2 27 0 244 366 36 36 chr2 37848649 37848870 -215407713 + L3 LINE CR1 57 277 -1300 226 327 131 0 chr2 37849361 37849468 -215407115 + L3 LINE CR1 1440 1560 -17 188 308 0 15 chr2 37849494 37849559 -215407024 - L2 LINE L2 -208 3064 3001 340 232 12 0 chr2 37849647 37849729 -215406854 + LTR67 LTR ERVL 453 535 -22 263 269 0 0 chr2 37851514 37851581 -215405002 - L3 LINE CR1 -346 1231 1165 882 306 47 59 chr2 37852582 37853072 -215403511 - L1MEd LINE L1 -5513 606 123 408 253 100 0 chr2 37853208 37853378 -215403205 - L1ME LINE L1 -342 5779 5593 4239 151 21 11 chr2 37853769 37854569 -215402014 + L1MB7 LINE L1 5366 6173 -11 878 312 69 14 chr2 37856334 37856824 -215399759 - L2 LINE L2 -1080 2234 1718 887 121 34 0 chr2 37856824 37856973 -215399610 - L1MA4 LINE L1 -99 6201 6048 774 282 74 33 chr2 37856977 37857941 -215398642 - L1ME LINE L1 -4678 1583 537 2388 71 0 10 chr2 37857972 37858268 -215398315 - AluY SINE Alu -13 298 6 429 340 25 25 chr2 37858534 37858890 -215397693 - L1ME LINE L1 -5619 451 96 5069 143 29 16 chr2 37858897 37859783 -215396800 - L1MC1 LINE L1 0 6333 5436 401 338 98 61 chr2 37860999 37861585 -215394998 - L2 LINE L2 0 3272 2591 1688 198 13 16 chr2 37861585 37861958 -215394625 + L1MB7 LINE L1 5794 6165 -19 1790 171 5 63 chr2 37862133 37862530 -215394053 - MLT1A2 LTR MaLR 0 374 1 660 291 88 4 chr2 37863736 37863963 -215392620 + MIR SINE MIR 16 261 -1 397 270 64 32 chr2 37864345 37864518 -215392065 - L1ME LINE L1 -448 5673 5495 237 33 0 0 chr2 37864645 37864675 -215391908 + (TG)n Simple_repeat Simple_repeat 2 31 0 25 31 0 0 chr2 37864737 37864769 -215391814 + AT_rich Low_complexity Low_complexity 1 32 0 731 158 0 8 chr2 37865471 37865591 -215390992 + FLAM_C SINE Alu 12 130 -13 23 33 0 0 chr2 37865626 37865656 -215390927 + AT_rich Low_complexity Low_complexity 1 30 0 334 314 26 16 chr2 37865737 37865926 -215390657 - L1ME LINE L1 -2004 4142 3952 227 265 162 8 chr2 37865965 37866082 -215390501 - MIR SINE MIR -50 212 78 906 245 15 8 chr2 37866198 37866459 -215390124 - L1MD3 LINE L1 -12 7983 7721 3912 123 86 91 chr2 37866459 37867847 -215388736 + pTR5 LTR ERV1 66 2438 0 2960 205 77 24 chr2 37867847 37868728 -215387855 - L1MC4 LINE L1 -410 7632 6705 288 0 0 0 chr2 37868729 37868761 -215387822 + (CA)n Simple_repeat Simple_repeat 2 33 0 430 327 0 0 chr2 37868771 37868936 -215387647 - L1M4 LINE L1 -1931 4215 4051 386 269 40 17 chr2 37868938 37869113 -215387470 - L1M4 LINE L1 -2028 4118 3940 494 321 83 12 chr2 37869476 37869728 -215386855 + L1MEc LINE L1 2125 2394 -4002 560 313 14 15 chr2 37869805 37870051 -215386532 + MLT1H LTR MaLR 81 314 -95 841 301 64 35 chr2 37871704 37871853 -215384730 - L2 LINE L2 -2 3311 3168 2387 61 0 0 chr2 37871853 37872148 -215384435 + AluY SINE Alu 1 295 -16 841 301 64 35 chr2 37872148 37872374 -215384209 - L2 LINE L2 -145 3168 2925 595 146 54 0 chr2 37872712 37872842 -215383741 - L1MB4 LINE L1 0 6180 6044 642 284 54 27 chr2 37872961 37873183 -215383400 + MIR SINE MIR 21 248 -14 2280 80 0 7 chr2 37873194 37873505 -215383078 - AluSx SINE Alu 0 310 2 180 0 0 0 chr2 37875016 37875036 -215381547 + (A)n Simple_repeat Simple_repeat 1 20 0 198 143 0 0 chr2 37875100 37875135 -215381448 + (TG)n Simple_repeat Simple_repeat 1 35 0 274 347 55 15 chr2 37876797 37876981 -215379602 + MIR SINE MIR 1 141 -67 2287 78 3 0 chr2 37877042 37877356 -215379227 + AluSq SINE Alu 1 315 0 306 291 87 0 chr2 37877587 37877690 -215378893 + MIR3 SINE MIR 93 204 -4 186 133 0 0 chr2 37877897 37877927 -215378656 + (TA)n Simple_repeat Simple_repeat 1 30 0 495 96 0 0 chr2 37877966 37878049 -215378534 + (TAGA)n Simple_repeat Simple_repeat 4 86 0 500 260 0 0 chr2 37878237 37878372 -215378211 + MIR SINE MIR 50 183 -63 222 171 0 0 chr2 37878754 37878795 -215377788 + (TGG)n Simple_repeat Simple_repeat 1 41 0 1701 176 22 0 chr2 37878840 37879118 -215377465 + AluJo SINE Alu 1 284 -28 207 0 0 0 chr2 37879121 37879144 -215377439 + (TAA)n Simple_repeat Simple_repeat 2 24 0 967 254 17 4 chr2 37879147 37879383 -215377200 - MIR SINE MIR -8 254 16 526 283 225 19 chr2 37880257 37880631 -215375952 - L2 LINE L2 -12 3301 2851 2178 101 20 3 chr2 37882300 37882606 -215373977 - AluSx SINE Alu -1 311 1 356 325 102 6 chr2 37882609 37882766 -215373817 + MIR SINE MIR 91 262 0 1067 205 5 45 chr2 37884194 37884418 -215372165 - MER20 DNA MER1_type -4 215 1 184 167 0 0 chr2 37885317 37885353 -215371230 + MIR SINE MIR 81 116 -92 247 222 124 81 chr2 37885558 37885743 -215370840 - MLT1L LTR MaLR -65 550 358 378 248 35 55 chr2 37885898 37886100 -215370483 - MLT1L LTR MaLR -410 205 8 253 261 29 0 chr2 37886238 37886307 -215370276 + A-rich Low_complexity Low_complexity 4 74 0 348 255 20 41 chr2 37887188 37887248 -215369335 + MER5B DNA MER1_type 1 60 -118 2258 117 0 0 chr2 37887248 37887548 -215369035 + AluSx SINE Alu 1 300 -12 348 255 20 41 chr2 37887548 37887585 -215368998 + MER5B DNA MER1_type 60 96 -82 643 243 164 9 chr2 37887614 37887840 -215368743 + MIR SINE MIR 1 261 -1 313 314 83 54 chr2 37888060 37888410 -215368173 - L2 LINE L2 -340 2974 2615 491 203 68 0 chr2 37888777 37888790 -215367793 - L1MA10 LINE L1 -40 6294 6282 2673 200 26 64 chr2 37888790 37889481 -215367102 - L1ME1 LINE L1 -44 6122 5458 352 252 153 0 chr2 37889825 37889936 -215366647 + MIR SINE MIR 20 147 -115 278 258 43 54 chr2 37889985 37890078 -215366505 - L2 LINE L2 0 3313 3222 326 78 31 31 chr2 37890872 37890936 -215365647 - L1MB8 LINE L1 -3 6175 6112 2160 86 7 0 chr2 37890937 37891217 -215365366 + AluSg SINE Alu 1 282 -28 245 207 0 0 chr2 37891221 37891274 -215365309 - L1MB7 LINE L1 -44 6134 6082 1790 229 48 47 chr2 37891338 37892158 -215364425 - L2 LINE L2 -3 3269 2455 614 211 100 39 chr2 37892679 37892859 -215363724 - MER63A DNA MER1_type -19 191 1 605 191 140 22 chr2 37892955 37893091 -215363492 - MER97c DNA MER1_type? -911 179 28 293 180 57 67 chr2 37893101 37893205 -215363378 + MIR SINE MIR 47 163 -62 262 370 24 6 chr2 37893357 37893522 -215363061 + L2 LINE L2 2914 3081 -191 2199 114 3 0 chr2 37893640 37893939 -215362644 + AluSg1 SINE Alu 3 302 -7 735 212 22 54 chr2 37893963 37894147 -215362436 - MER5B DNA MER1_type 0 178 1 242 285 97 56 chr2 37894212 37894356 -215362227 + L2 LINE L2 3160 3309 -4 2488 88 0 0 chr2 37895247 37895555 -215361028 - AluSg SINE Alu -2 308 1 1935 78 51 31 chr2 37895563 37895715 -215360868 - AluY SINE Alu -12 299 152 549 0 0 0 chr2 37895715 37895776 -215360807 + (TG)n Simple_repeat Simple_repeat 2 62 0 1935 78 51 31 chr2 37895776 37895916 -215360667 - AluY SINE Alu -159 152 1 2911 153 9 13 chr2 37896155 37896620 -215359963 - MLT1C LTR MaLR -4 463 1 332 293 47 47 chr2 37896726 37896832 -215359751 + MIR SINE MIR 17 122 -86 5608 135 23 39 chr2 37897563 37898037 -215358546 + L1MA9 LINE L1 3984 4464 -1682 1588 185 0 11 chr2 37898037 37898323 -215358260 + AluJb SINE Alu 1 283 -29 5608 135 23 39 chr2 37898323 37898861 -215357722 + L1MA9 LINE L1 4464 4980 -1166 2964 127 46 40 chr2 37898861 37899107 -215357476 + L1MA9 LINE L1 5784 6027 -285 2138 128 0 3 chr2 37899107 37899404 -215357179 + AluSq SINE Alu 1 296 -17 2964 127 46 40 chr2 37899404 37899672 -215356911 + L1MA9 LINE L1 6027 6307 -5 285 323 201 38 chr2 37900044 37900413 -215356170 + L2 LINE L2 2842 3270 -2 299 322 120 33 chr2 37900624 37900807 -215355776 + MIR3 SINE MIR 1 199 -9 47 78 0 0 chr2 37901289 37901392 -215355191 + AT_rich Low_complexity Low_complexity 1 103 0 809 299 75 9 chr2 37901633 37901978 -215354605 - L1ME LINE L1 -399 5722 5355 1090 190 62 0 chr2 37902135 37902346 -215354237 + AluJo SINE Alu 86 309 -3 1677 82 0 0 chr2 37902402 37902610 -215353973 - AluSq SINE Alu -16 297 90 1849 175 13 60 chr2 37903638 37904021 -215352562 - MLT1A1 LTR MaLR 0 365 1 2129 116 10 0 chr2 37904171 37904465 -215352118 + AluSx SINE Alu 2 298 -14 382 227 64 39 chr2 37904607 37904810 -215351773 + L1ME4a LINE L1 5772 5979 -142 2012 101 87 3 chr2 37904941 37905229 -215351354 + AluSx SINE Alu 1 312 0 241 333 11 11 chr2 37905659 37905749 -215350834 + (CA)n Simple_repeat Simple_repeat 1 90 0 1521 150 84 60 chr2 37906050 37906314 -215350269 + Tigger3(Golem) DNA MER2_type 1 276 -2753 2269 101 0 7 chr2 37906314 37906611 -215349972 - AluSx SINE Alu -17 295 1 1521 150 84 60 chr2 37906611 37906679 -215349904 + Tigger3(Golem) DNA MER2_type 276 341 -2688 4296 121 19 15 chr2 37906685 37906912 -215349671 + Tigger3(Golem) DNA MER2_type 2340 2565 -463 2884 10 0 0 chr2 37906912 37907223 -215349360 + AluYa5 SINE Alu 1 311 0 4296 121 19 15 chr2 37907223 37907681 -215348902 + Tigger3(Golem) DNA MER2_type 2565 3028 0 27 49 0 0 chr2 37907755 37907796 -215348787 + AT_rich Low_complexity Low_complexity 1 41 0 1106 243 150 57 chr2 37908355 37908394 -215348189 - MLT1J LTR MaLR 0 511 477 1918 134 33 16 chr2 37908394 37908700 -215347883 + AluSx SINE Alu 1 311 -1 1106 243 150 57 chr2 37908700 37908923 -215347660 - MLT1J LTR MaLR -34 477 276 3309 188 24 16 chr2 37908923 37909552 -215347031 - LTR27 LTR ERV1 0 636 3 1106 243 150 57 chr2 37909552 37909648 -215346935 - MLT1J LTR MaLR -235 276 190 2300 71 0 4 chr2 37909648 37909953 -215346630 - AluSc SINE Alu 0 304 1 1106 243 150 57 chr2 37909953 37910044 -215346539 - MLT1J LTR MaLR -321 190 17 753 325 90 38 chr2 37910984 37911430 -215345153 - L2 LINE L2 0 3272 2804 263 266 0 0 chr2 37911495 37911559 -215345024 - MLT1K LTR MaLR -11 577 514 315 130 0 0 chr2 37911689 37911743 -215344840 + (TC)n Simple_repeat Simple_repeat 1 54 0 241 330 19 19 chr2 37912303 37912396 -215344187 - L2 LINE L2 -559 2755 2660 804 167 107 6 chr2 37912396 37912564 -215344019 + MER5A DNA MER1_type 1 185 -4 241 330 19 19 chr2 37912564 37912576 -215344007 - L2 LINE L2 -653 2661 2650 246 266 0 25 chr2 37913081 37913160 -215343423 + T-rich Low_complexity Low_complexity 3 79 0 2270 89 10 0 chr2 37913279 37913571 -215343012 + AluSx SINE Alu 18 312 0 324 188 232 0 chr2 37915174 37915243 -215341340 - Tigger5 DNA MER2_type -2 2321 2237 338 173 0 0 chr2 37915256 37915308 -215341275 - Tigger5 DNA MER2_type -2271 52 1 185 349 81 0 chr2 37915506 37915592 -215340991 - L2 LINE L2 -227 3045 2953 217 289 0 0 chr2 37916457 37916509 -215340074 + (CA)n Simple_repeat Simple_repeat 1 52 0 253 279 155 23 chr2 37916673 37916802 -215339781 + MIR SINE MIR 46 191 -71 416 97 0 16 chr2 37916959 37917021 -215339562 - L2 LINE L2 -69 3244 3184 24 0 0 0 chr2 37917554 37917578 -215339005 + AT_rich Low_complexity Low_complexity 1 24 0 811 280 182 18 chr2 37920070 37920509 -215336074 - L3 LINE CR1 -4 1573 1063 664 263 138 36 chr2 37921739 37922211 -215334372 - L1MEc LINE L1 -4731 1665 1146 * 15864 201 31 12 chr2 37922184 37927080 -215329503 - L1PA16 LINE L1 -2 6233 1251 487 305 48 1 chr2 37927094 37927330 -215329253 - L1PA16 LINE L1 -6558 280 1 514 296 77 25 chr2 37927882 37928078 -215328505 - MIR SINE MIR -44 218 13 2403 94 0 0 chr2 37928926 37929225 -215327358 + AluSg SINE Alu 6 304 -6 212 313 50 0 chr2 37929269 37929349 -215327234 - MIR SINE MIR -82 180 97 899 122 15 0 chr2 37929358 37929489 -215327094 + AluSq/x SINE Alu 1 133 -179 2173 128 0 0 chr2 37929494 37929792 -215326791 + AluSx SINE Alu 1 298 -14 4989 76 6 5 chr2 37931140 37931769 -215324814 + L1PA11 LINE L1 5545 6174 0 250 304 86 58 chr2 37932227 37932481 -215324102 + MIR SINE MIR 3 262 0 1097 256 106 20 chr2 37933831 37934336 -215322247 - L1MC4a LINE L1 -443 7365 6882 2351 83 0 0 chr2 37934336 37934638 -215321945 - AluSp SINE Alu -11 302 1 1097 256 106 20 chr2 37934638 37934705 -215321878 - L1MC4a LINE L1 -926 6882 6822 358 308 0 53 chr2 37936557 37936690 -215319893 - L2 LINE L2 0 3313 3188 464 268 106 7 chr2 37938177 37938319 -215318264 - MIR SINE MIR -10 252 97 2296 94 0 0 chr2 37938364 37938673 -215317910 - AluSc SINE Alu 0 309 1 2276 76 0 7 chr2 37939839 37940140 -215316443 + AluSc SINE Alu 1 299 -10 355 220 55 11 chr2 37940261 37940352 -215316231 - MIR SINE MIR -84 178 84 250 242 0 32 chr2 37940783 37940845 -215315738 - L2 LINE L2 0 3272 3213 312 292 40 11 chr2 37941536 37941646 -215314937 + MER5A DNA MER1_type 63 164 -14 2035 108 3 0 chr2 37941964 37942251 -215314332 - AluSp SINE Alu -7 306 19 1971 211 15 66 chr2 37943391 37943630 -215312953 + MLT1D LTR MaLR 1 251 -254 2121 128 77 8 chr2 37943630 37943795 -215312788 - THE1C LTR MaLR 0 375 223 276 30 0 0 chr2 37943795 37943828 -215312755 + (GA)n Simple_repeat Simple_repeat 1 33 0 2121 128 77 8 chr2 37943828 37944013 -215312570 - THE1C LTR MaLR -152 223 1 1971 211 15 66 chr2 37944013 37944305 -215312278 + MLT1D LTR MaLR 251 505 0 1587 181 7 13 chr2 37944627 37944926 -215311657 + AluJo SINE Alu 1 297 -15 309 186 17 0 chr2 37944954 37945013 -215311570 - MIR SINE MIR -102 160 101 207 214 79 67 chr2 37945317 37945406 -215311177 + L2 LINE L2 3171 3260 -12 215 437 34 8 chr2 37946177 37946296 -215310287 - L3b LINE CR1 -22 1561 1440 2066 123 0 0 chr2 37946530 37946832 -215309751 + AluSx SINE Alu 1 302 -10 722 263 9 60 chr2 37946840 37947057 -215309526 - MIR SINE MIR -21 241 36 282 257 10 79 chr2 37947232 37947333 -215309250 - MIR SINE MIR -58 204 111 863 188 24 28 chr2 37948042 37948255 -215308328 - L1MB7 LINE L1 0 6184 5973 419 228 20 20 chr2 37948515 37948616 -215307967 - L2 LINE L2 0 3313 3213 265 230 57 98 chr2 37949502 37949629 -215306954 + L1ME LINE L1 5279 5410 -711 2138 117 7 0 chr2 37949629 37949936 -215306647 + AluSg SINE Alu 2 310 0 265 230 57 98 chr2 37949936 37950104 -215306479 + L1ME LINE L1 5410 5665 -456 1741 118 3 38 chr2 37950505 37950646 -215305937 + AluJo SINE Alu 1 128 -184 2102 96 7 0 chr2 37950646 37950937 -215305646 + AluSp SINE Alu 12 304 -9 1741 118 3 38 chr2 37950937 37951083 -215305500 + AluJo SINE Alu 128 278 -34 185 65 32 0 chr2 37951088 37951119 -215305464 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 26 0 0 27 chr2 37951831 37951843 -215304740 + AT_rich Low_complexity Low_complexity 1 12 -24 1760 102 84 7 chr2 37951843 37952117 -215304466 + AluSx SINE Alu 1 295 -17 26 0 0 27 chr2 37952117 37952141 -215304442 + AT_rich Low_complexity Low_complexity 12 36 0 262 362 43 21 chr2 37954371 37954512 -215302071 - L3 LINE CR1 -1 1576 1433 253 125 0 0 chr2 37954592 37954624 -215301959 + Charlie1 DNA MER1_type 1 32 -2729 1016 185 68 136 chr2 37954645 37954899 -215301684 + Charlie1 DNA MER1_type 2343 2613 -148 1920 128 21 0 chr2 37954899 37955188 -215301395 + AluSx SINE Alu 1 295 -17 2379 61 3 6 chr2 37955189 37955500 -215301083 + AluY SINE Alu 1 310 -1 1016 185 68 136 chr2 37955500 37955669 -215300914 + Charlie1 DNA MER1_type 2612 2739 -22 915 324 138 18 chr2 37955691 37956320 -215300263 - L3 LINE CR1 -304 1273 569 210 309 36 0 chr2 37956504 37956559 -215300024 - L2 LINE L2 -15 3257 3201 532 246 273 0 chr2 37957591 37957778 -215298805 + MIR SINE MIR 11 248 -14 1870 94 30 11 chr2 37957834 37958100 -215298483 - L1PA11 LINE L1 -1 6173 5903 495 281 16 0 chr2 37958881 37959002 -215297581 - MIR3 SINE MIR -42 166 44 217 224 12 12 chr2 37959179 37959264 -215297319 + GA-rich Low_complexity Low_complexity 4 88 0 204 327 0 0 chr2 37959590 37959642 -215296941 + MIR SINE MIR 204 255 -7 409 314 51 29 chr2 37959679 37959854 -215296729 + L3 LINE CR1 1387 1565 -12 22 0 0 0 chr2 37961547 37961569 -215295014 + AT_rich Low_complexity Low_complexity 1 22 0 333 320 176 40 chr2 37961916 37962593 -215293990 - L2 LINE L2 -542 2772 2004 293 245 75 21 chr2 37962641 37962735 -215293848 + MER5B DNA MER1_type 1 99 -79 360 196 0 54 chr2 37962744 37962832 -215293751 + MER5A DNA MER1_type 4 85 -104 286 233 278 0 chr2 37963607 37963697 -215292886 - MER5A DNA MER1_type -6 183 69 477 240 25 16 chr2 37965915 37966036 -215290547 + MIR3 SINE MIR 33 154 -54 535 280 97 11 chr2 37967542 37967728 -215288855 + MIR3 SINE MIR 4 205 -3 209 230 108 0 chr2 37968129 37968203 -215288380 - MIR3 SINE MIR -11 197 116 225 192 24 0 chr2 37968974 37969033 -215287550 - MIR SINE MIR -87 121 59 2205 183 34 28 chr2 37969770 37970272 -215286311 + MLT1D LTR MaLR 1 505 0 563 242 0 24 chr2 37970425 37970549 -215286034 + MER5B DNA MER1_type 8 128 -50 245 252 38 137 chr2 37970442 37970573 -215286010 - MER5A DNA MER1_type -24 165 48 * 755 242 13 0 chr2 37970935 37971092 -215285491 + MER5B DNA MER1_type 13 171 -7 22 0 0 0 chr2 37971285 37971307 -215285276 + AT_rich Low_complexity Low_complexity 1 22 0 467 238 252 0 chr2 37971325 37971476 -215285107 + MER5A DNA MER1_type 1 189 0 222 276 75 52 chr2 37972537 37972671 -215283912 - L3 LINE CR1 -187 1390 1254 226 344 0 16 chr2 37973098 37973159 -215283424 - L3b LINE CR1 -10 1573 1514 1882 204 23 72 chr2 37973523 37973723 -215282860 - MER82 DNA MER2_type 0 653 445 2021 63 0 26 chr2 37973723 37974076 -215282507 - AluSq SINE Alu 0 365 20 1882 204 23 72 chr2 37974076 37974349 -215282234 - MER82 DNA MER2_type -208 445 202 21 0 0 0 chr2 37974488 37974509 -215282074 + AT_rich Low_complexity Low_complexity 1 21 0 1034 198 0 29 chr2 37974651 37974858 -215281725 - MER82 DNA MER2_type -452 201 1 688 135 0 0 chr2 37975050 37975146 -215281437 - AluJ/FLAM SINE Alu -215 97 2 23 33 0 0 chr2 37975317 37975347 -215281236 + AT_rich Low_complexity Low_complexity 1 30 0 416 186 62 44 chr2 37975527 37975640 -215280943 - MER69A DNA AcHobo -1 176 62 388 304 179 29 chr2 37975725 37976211 -215280372 - L2 LINE L2 -677 2637 2079 1971 128 0 13 chr2 37976855 37977160 -215279423 + AluSg SINE Alu 1 301 -9 1583 183 3 17 chr2 37977811 37978112 -215278471 + AluJo SINE Alu 1 297 -15 2045 121 3 0 chr2 37978146 37978444 -215278139 + AluSx SINE Alu 1 299 -13 2265 101 0 0 chr2 37978445 37978751 -215277832 + AluSg SINE Alu 1 306 -4 694 148 0 101 chr2 37978784 37978933 -215277650 - MER45A DNA AcHobo -44 134 1 293 204 93 0 chr2 37979420 37979501 -215277082 - MIR SINE MIR -75 133 40 1652 126 112 7 chr2 37979906 37980183 -215276400 + AluSg1 SINE Alu 1 306 -3 246 274 128 34 chr2 37981174 37981291 -215275292 - LTR67 LTR ERVL -6 551 424 266 291 11 54 chr2 37981647 37981760 -215274823 - LTR67 LTR ERVL -363 194 37 378 143 29 43 chr2 37982374 37982444 -215274139 + MER81 DNA DNA 41 109 -5 409 256 8 53 chr2 37982572 37982705 -215273878 - MIR3 SINE MIR -79 129 3 2253 98 0 0 chr2 37982930 37983226 -215273357 + AluSc SINE Alu 1 296 -13 503 128 84 2 chr2 37983297 37983390 -215273193 + L1MB4 LINE L1 6046 6151 -29 1913 156 0 3 chr2 37983401 37983708 -215272875 + AluJb SINE Alu 1 306 -6 240 35 0 0 chr2 37984379 37984408 -215272175 + (CA)n Simple_repeat Simple_repeat 1 29 0 228 241 13 63 chr2 37984627 37984706 -215271877 + MIR3 SINE MIR 128 202 -6 2126 99 27 3 chr2 37984923 37985097 -215271486 - AluSc SINE Alu -8 301 116 188 0 74 0 chr2 37985097 37985124 -215271459 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2126 99 27 3 chr2 37985124 37985243 -215271340 - AluSc SINE Alu -193 116 1 1895 146 11 0 chr2 37987792 37988095 -215268488 - AluSx SINE Alu 0 306 1 1164 135 0 0 chr2 37988226 37988389 -215268194 + FRAM SINE Alu 2 164 -12 2188 98 3 3 chr2 37988390 37988685 -215267898 + AluSp SINE Alu 1 295 -18 2094 143 0 0 chr2 37989013 37989314 -215267269 - AluSx SINE Alu -11 301 1 338 286 246 6 chr2 37989835 37990006 -215266577 + L3 LINE CR1 1318 1529 -48 2399 101 0 9 chr2 37990040 37990356 -215266227 - AluSq SINE Alu 0 313 1 330 284 104 83 chr2 37990911 37991229 -215265354 + L2 LINE L2 1560 1870 -1444 1623 151 76 14 chr2 37991229 37991520 -215265063 - AluSc SINE Alu 0 309 1 330 284 104 83 chr2 37991520 37991548 -215265035 + L2 LINE L2 1870 1896 -1418 2175 124 3 0 chr2 37991548 37991846 -215264737 + AluSx SINE Alu 1 299 -13 330 284 104 83 chr2 37991846 37991942 -215264641 + L2 LINE L2 1896 2012 -1302 285 333 63 0 chr2 37991954 37992065 -215264518 + L3 LINE CR1 1459 1576 -1 1976 125 21 0 chr2 37993440 37993721 -215262862 + AluSx SINE Alu 1 287 -25 494 310 32 13 chr2 37993738 37993896 -215262687 + MER5B DNA MER1_type 18 178 0 1152 214 66 7 chr2 37994117 37994406 -215262177 - MER114 LTR ERV -342 306 1 1928 109 12 75 chr2 37994557 37994878 -215261705 + AluSx SINE Alu 1 301 -11 368 183 14 0 chr2 37995123 37995194 -215261389 - MER94 DNA DNA -62 72 1 759 291 129 31 chr2 37995271 37995851 -215260732 - L2 LINE L2 -2527 787 151 213 303 11 34 chr2 37995906 37995995 -215260588 - MIR3 SINE MIR -14 194 108 191 250 0 0 chr2 37996740 37996772 -215259811 - L2 LINE L2 -98 3174 3143 273 281 0 0 chr2 37996890 37996954 -215259629 - MIR SINE MIR -19 243 180 365 106 0 0 chr2 37996973 37997020 -215259563 - MSTD LTR MaLR 0 457 411 * 1223 206 16 24 chr2 37996995 37997243 -215259340 - MSTD LTR MaLR -150 246 1 371 337 12 0 chr2 37997247 37997398 -215259185 - MIR SINE MIR -82 126 4 328 336 19 10 chr2 37997672 37997776 -215258807 + L2 LINE L2 2974 3078 -194 1936 134 35 14 chr2 37998160 37998450 -215258133 - AluSx SINE Alu -16 296 1 400 320 211 16 chr2 37998492 37998876 -215257707 - L2 LINE L2 -5 3267 2809 235 282 14 0 chr2 37998884 37998955 -215257628 - MLT1L LTR MaLR 0 615 544 472 214 28 62 chr2 38001009 38001154 -215255429 - MIR3 SINE MIR -66 142 3 650 324 17 28 chr2 38001819 38002106 -215254477 + REP3 LTR ERV 3 286 -276 2061 136 3 0 chr2 38002108 38002410 -215254173 - AluSx SINE Alu -5 307 5 484 86 0 0 chr2 38002441 38002511 -215254072 + AluJ/FRAM SINE Alu 233 302 -10 413 258 141 12 chr2 38002533 38002696 -215253887 + REP3 LTR ERV 335 518 -44 1897 145 3 23 chr2 38003197 38003501 -215253082 - AluJb SINE Alu -14 298 1 2197 119 0 3 chr2 38003517 38003827 -215252756 - AluY SINE Alu 0 311 3 320 273 39 78 chr2 38004243 38004327 -215252256 - MIR SINE MIR -32 230 153 3706 151 65 11 chr2 38004327 38004524 -215252059 - L1MA5 LINE L1 -5 6295 6110 2455 58 10 10 chr2 38004524 38004832 -215251751 + AluY SINE Alu 1 308 -3 3706 151 65 11 chr2 38004832 38005268 -215251315 - L1MA5 LINE L1 -190 6110 5628 320 273 39 78 chr2 38005268 38005337 -215251246 - MIR SINE MIR -109 153 83 5356 238 45 8 chr2 38006254 38007788 -215248795 - L1MEc LINE L1 -2229 3986 2397 1345 132 0 0 chr2 38007793 38007982 -215248601 - AluSg/x SINE Alu -8 304 116 2043 137 0 3 chr2 38008019 38008338 -215248245 + AluSg SINE Alu 1 318 0 2012 260 49 26 chr2 38008339 38008378 -215248205 - L1MEc LINE L1 -4325 2071 2034 2121 73 3 108 chr2 38008378 38008719 -215247864 + AluY SINE Alu 1 305 -6 2012 260 49 26 chr2 38008719 38009433 -215247150 - L1MEc LINE L1 -4362 2034 1301 1382 273 92 25 chr2 38009431 38009941 -215246642 - L1MEc LINE L1 -5814 582 39 * 2501 77 0 0 chr2 38010031 38010341 -215246242 - AluSp SINE Alu -3 310 1 2894 62 5 50 chr2 38010703 38011104 -215245479 - L1PB1 LINE L1 0 6151 5769 * 7200 68 37 0 chr2 38011096 38012052 -215244531 - L1PA8 LINE L1 -2 6170 5205 878 166 104 19 chr2 38012135 38012268 -215244315 - MER93b LTR ERV1 0 373 253 2728 102 41 78 chr2 38012268 38012729 -215243854 + MLT2A1 LTR ERVL 1 444 0 878 166 104 19 chr2 38012729 38012911 -215243672 - MER93b LTR ERV1 -120 253 1 336 103 52 0 chr2 38013050 38013108 -215243475 + MLT1L LTR MaLR 216 276 -339 804 231 28 6 chr2 38013115 38013297 -215243286 - MLT1B LTR MaLR 0 390 205 231 61 0 0 chr2 38013299 38013332 -215243251 + (GGGGA)n Simple_repeat Simple_repeat 5 37 0 456 285 100 40 chr2 38014022 38014582 -215242001 + L1MC/D LINE L1 3688 4289 -1857 977 114 8 0 chr2 38014660 38014791 -215241792 - FLAM_C SINE Alu 0 133 2 311 308 159 14 chr2 38015126 38015344 -215241239 + L1MC/D LINE L1 4741 5009 -1137 405 0 0 0 chr2 38015344 38015389 -215241194 + (CA)n Simple_repeat Simple_repeat 2 46 0 311 308 159 14 chr2 38015389 38015446 -215241137 + L1MC/D LINE L1 5009 5056 -1090 1361 165 88 11 chr2 38015588 38015861 -215240722 - AluJo SINE Alu -18 294 1 1379 231 181 31 chr2 38016314 38016799 -215239784 + MLT1E2 LTR MaLR 1 558 -68 496 275 46 61 chr2 38016814 38017160 -215239423 + L1MC/D LINE L1 5362 5702 -540 330 234 228 18 chr2 38017599 38017766 -215238817 + L2 LINE L2 3096 3297 -16 276 289 182 0 chr2 38017921 38018042 -215238541 - MIR SINE MIR -49 213 71 316 263 135 23 chr2 38018984 38019117 -215237466 - L2 LINE L2 -2 3311 3164 507 73 0 0 chr2 38024265 38024333 -215232250 + (CA)n Simple_repeat Simple_repeat 2 69 0 478 87 39 10 chr2 38024768 38024872 -215231711 + (TA)n Simple_repeat Simple_repeat 1 107 0 22 0 0 0 chr2 38028628 38028650 -215227933 + AT_rich Low_complexity Low_complexity 1 22 0 2398 97 0 3 chr2 38029583 38029893 -215226690 + AluSc SINE Alu 1 309 0 1329 212 53 2 chr2 38030723 38031068 -215225515 + L1MC4 LINE L1 7691 7995 0 2301 114 0 0 chr2 38031255 38031563 -215225020 + AluSx SINE Alu 1 308 -4 263 216 0 0 chr2 38032295 38032346 -215224237 - MARNA DNA Mariner -120 466 416 245 239 190 54 chr2 38032368 38032552 -215224031 + MARNA DNA Mariner 210 418 -168 202 237 17 34 chr2 38032901 38032960 -215223623 + (CATATA)n Simple_repeat Simple_repeat 2 59 0 27 29 0 0 chr2 38034133 38034167 -215222416 + AT_rich Low_complexity Low_complexity 1 34 0 2750 204 75 58 chr2 38034405 38035082 -215221501 + L1ME2 LINE L1 5351 6015 -149 2068 159 128 16 chr2 38035082 38035465 -215221118 + MSTA LTR MaLR 3 428 0 838 124 7 58 chr2 38035468 38035605 -215220978 - FLAM_C SINE Alu -1 132 3 2750 204 75 58 chr2 38035605 38035723 -215220860 + L1ME2 LINE L1 6016 6164 0 1174 117 101 17 chr2 38035773 38036078 -215220505 + AluSx SINE Alu 1 320 0 32 43 0 0 chr2 38036572 38036618 -215219965 + AT_rich Low_complexity Low_complexity 1 46 0 187 182 30 0 chr2 38037032 38037065 -215219518 - MIR SINE MIR -75 187 154 214 333 24 73 chr2 38037145 38037268 -215219315 - L2 LINE L2 -22 3250 3134 247 355 57 54 chr2 38038139 38038562 -215218021 - L2 LINE L2 -1294 2020 1597 776 231 35 0 chr2 38039805 38039974 -215216609 + MER58C DNA MER1_type 2 176 -39 297 0 0 0 chr2 38040112 38040145 -215216438 + (CA)n Simple_repeat Simple_repeat 1 33 0 5138 123 44 2 chr2 38040157 38040995 -215215588 - L1PA15 LINE L1 -8 6157 5285 * 14610 195 29 16 chr2 38040993 38041112 -215215471 - L1P4 LINE L1 -734 5431 5315 2317 55 41 3 chr2 38041112 38041403 -215215180 - AluY SINE Alu -9 302 1 14610 195 29 16 chr2 38041403 38043080 -215213503 - L1P4 LINE L1 -850 5315 3661 2279 98 0 19 chr2 38043080 38043395 -215213188 - AluSq SINE Alu -4 309 1 14610 195 29 16 chr2 38043395 38043952 -215212631 - L1P4 LINE L1 -2504 3661 3113 2217 106 0 0 chr2 38043952 38044234 -215212349 - AluSg SINE Alu -22 288 7 14610 195 29 16 chr2 38044234 38044458 -215212125 - L1P4 LINE L1 -3052 3113 2893 1453 190 31 17 chr2 38044458 38044747 -215211836 - AluJb SINE Alu -19 293 1 14610 195 29 16 chr2 38044747 38045566 -215211017 - L1P4 LINE L1 -3272 2893 1990 574 107 11 203 chr2 38045590 38045777 -215210806 + FRAM SINE Alu 18 168 -8 480 196 49 0 chr2 38045778 38045880 -215210703 - U6 snRNA snRNA 0 107 1 375 360 46 29 chr2 38046510 38046749 -215209834 + MIR SINE MIR 20 262 0 22 56 0 0 chr2 38048219 38048255 -215208328 + AT_rich Low_complexity Low_complexity 1 36 0 6121 123 118 13 chr2 38048834 38049948 -215206635 + Tigger3b DNA MER2_type 1 1231 0 789 256 6 0 chr2 38050057 38050237 -215206346 - MIR SINE MIR -50 212 32 409 350 13 6 chr2 38050289 38050446 -215206137 + L3 LINE CR1 1143 1300 -277 1866 210 82 41 chr2 38050456 38050971 -215205612 + MLT1F LTR MaLR 1 536 -6 782 256 0 0 chr2 38051791 38051947 -215204636 + AluY SINE Alu 133 288 -23 2288 105 0 0 chr2 38052043 38052337 -215204246 + AluSc SINE Alu 1 294 -15 2151 105 0 29 chr2 38052354 38052667 -215203916 + AluY SINE Alu 1 304 -7 274 286 0 12 chr2 38052670 38052754 -215203829 + L1MEd LINE L1 1032 1114 -5091 375 205 16 33 chr2 38052820 38052942 -215203641 + L1MEd LINE L1 1101 1220 -4997 230 274 81 81 chr2 38053025 38053284 -215203299 + L1MEd LINE L1 1496 1754 -4642 1935 162 13 0 chr2 38053608 38053910 -215202673 + AluJo SINE Alu 1 306 -6 360 303 0 32 chr2 38053910 38054040 -215202543 + L1MEd LINE L1 2228 2394 -3875 2367 71 3 3 chr2 38054040 38054336 -215202247 - AluY SINE Alu -15 296 1 1710 179 0 13 chr2 38054365 38054666 -215201917 + AluJb SINE Alu 1 297 -15 261 269 131 69 chr2 38054699 38054844 -215201739 - L2 LINE L2 -661 2653 2500 2377 74 0 3 chr2 38055132 38055428 -215201155 - AluY SINE Alu -16 295 1 2046 122 7 3 chr2 38055911 38056215 -215200368 - AluSx SINE Alu -7 305 1 629 225 31 84 chr2 38056875 38057102 -215199481 + L1ME3A LINE L1 5941 6155 -15 2365 107 0 0 chr2 38057121 38057431 -215199152 - AluSx SINE Alu 0 312 3 2174 124 3 0 chr2 38057442 38057749 -215198834 - AluSx SINE Alu -3 309 2 21 36 0 0 chr2 38057924 38057952 -215198631 + AT_rich Low_complexity Low_complexity 1 28 0 1427 182 0 85 chr2 38058228 38058364 -215198219 + AluJo SINE Alu 1 96 -216 2063 123 0 3 chr2 38058364 38058648 -215197935 - AluSx SINE Alu -29 283 1 1427 182 0 85 chr2 38058648 38058829 -215197754 + AluJo SINE Alu 96 291 -21 180 0 0 0 chr2 38059449 38059469 -215197114 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 2284 117 0 16 chr2 38059496 38059813 -215196770 - AluSx SINE Alu 0 312 1 21 0 0 0 chr2 38059823 38059844 -215196739 + AT_rich Low_complexity Low_complexity 1 21 0 23 68 0 0 chr2 38060677 38060721 -215195862 + AT_rich Low_complexity Low_complexity 1 44 0 704 136 7 100 chr2 38060766 38060865 -215195718 - FAM SINE Alu -158 163 79 1878 178 0 6 chr2 38060865 38061179 -215195404 + AluJb SINE Alu 1 312 0 704 136 7 100 chr2 38061179 38061219 -215195364 - FAM SINE Alu -242 79 37 2155 127 0 7 chr2 38061553 38061853 -215194730 + AluSx SINE Alu 1 298 -14 21 0 0 0 chr2 38063201 38063222 -215193361 + AT_rich Low_complexity Low_complexity 1 21 0 396 0 0 0 chr2 38065423 38065467 -215191116 + (CA)n Simple_repeat Simple_repeat 2 45 0 2017 127 23 0 chr2 38065527 38065647 -215190936 + AluSq SINE Alu 1 117 -196 441 0 0 0 chr2 38065647 38065696 -215190887 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 2017 127 23 0 chr2 38065696 38065874 -215190709 + AluSq SINE Alu 117 306 -7 1755 222 167 93 chr2 38066249 38067020 -215189563 + L2 LINE L2 2207 2919 -394 288 0 0 0 chr2 38067020 38067052 -215189531 + (TG)n Simple_repeat Simple_repeat 1 32 0 1755 222 167 93 chr2 38067052 38067070 -215189513 + L2 LINE L2 2919 2934 -379 1805 170 0 10 chr2 38067070 38067364 -215189219 - AluJo SINE Alu -21 291 1 1755 222 167 93 chr2 38067364 38067584 -215188999 + L2 LINE L2 2934 3311 -2 2439 85 0 0 chr2 38068858 38069164 -215187419 - AluSx SINE Alu -6 306 1 1339 149 27 5 chr2 38069331 38069552 -215187031 - MER46A DNA MER2_type 0 236 11 2014 123 14 0 chr2 38069628 38069913 -215186670 + AluSx SINE Alu 4 292 -20 1507 161 27 23 chr2 38070516 38070815 -215185768 + L1PA16 LINE L1 5867 6166 0 2002 129 3 0 chr2 38071119 38071405 -215185178 + AluSx SINE Alu 1 287 -25 365 109 0 0 chr2 38071405 38071460 -215185123 + Alu SINE Alu 238 292 -8 551 265 54 12 chr2 38073206 38073372 -215183211 - MER117 DNA MER1_type 0 197 25 2480 58 0 0 chr2 38073426 38073720 -215182863 + AluY SINE Alu 1 294 -17 238 291 136 78 chr2 38073787 38073993 -215182590 - L3 LINE CR1 -1127 450 233 2179 90 0 42 chr2 38074010 38074322 -215182261 + AluY SINE Alu 1 299 -12 2322 107 3 0 chr2 38075266 38075575 -215181008 + AluSp SINE Alu 1 310 -3 2348 72 7 7 chr2 38075826 38076117 -215180466 - AluY SINE Alu -20 291 1 1124 179 102 38 chr2 38076135 38076370 -215180213 - AluJo SINE Alu -61 251 2 33 25 0 0 chr2 38076482 38076522 -215180061 + AT_rich Low_complexity Low_complexity 1 40 0 323 269 129 59 chr2 38076951 38077137 -215179446 - MIR SINE MIR -56 206 8 267 241 9 27 chr2 38077251 38077363 -215179220 + GA-rich Low_complexity Low_complexity 2 111 0 261 139 0 0 chr2 38078241 38078284 -215178299 + (CCTA)n Simple_repeat Simple_repeat 2 44 0 1642 154 4 32 chr2 38078285 38078564 -215178019 - AluSx SINE Alu -30 282 12 22 0 0 0 chr2 38078658 38078680 -215177903 + AT_rich Low_complexity Low_complexity 1 22 0 2167 92 0 18 chr2 38078989 38079302 -215177281 + AluSc SINE Alu 1 308 0 2269 100 0 0 chr2 38079651 38079950 -215176633 + AluY SINE Alu 1 299 -12 22 56 0 0 chr2 38081180 38081216 -215175367 + AT_rich Low_complexity Low_complexity 1 36 0 253 299 142 22 chr2 38081713 38081847 -215174736 + MIR SINE MIR 20 169 -93 180 282 0 0 chr2 38081821 38081860 -215174723 + L2 LINE L2 3253 3291 -22 * 833 229 86 4 chr2 38082029 38082273 -215174310 - Charlie7 DNA MER1_type -353 2259 1996 570 279 88 7 chr2 38082279 38082551 -215174032 - Charlie7 DNA MER1_type -721 1891 1598 1817 149 3 7 chr2 38082927 38083209 -215173374 + AluSx SINE Alu 3 283 -29 309 26 0 0 chr2 38083209 38083247 -215173336 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 2342 97 3 0 chr2 38083350 38083649 -215172934 - AluSq SINE Alu -13 300 1 1324 74 42 23 chr2 38084331 38084546 -215172037 + L1MA2 LINE L1 6086 6304 0 1794 147 21 4 chr2 38084564 38084843 -215171740 + AluJb SINE Alu 3 286 -26 261 0 0 0 chr2 38084844 38084873 -215171710 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 24 0 0 0 chr2 38084878 38084902 -215171681 + AT_rich Low_complexity Low_complexity 1 24 0 2114 102 23 16 chr2 38085024 38085329 -215171254 + AluSx SINE Alu 1 307 -5 2096 118 3 3 chr2 38085651 38085947 -215170636 + AluSg SINE Alu 4 299 -11 291 241 176 9 chr2 38085947 38086055 -215170528 - MIR SINE MIR -18 244 119 215 245 0 0 chr2 38086353 38086406 -215170177 + A-rich Low_complexity Low_complexity 1 53 0 878 193 28 47 chr2 38086691 38086945 -215169638 + L1ME1 LINE L1 5767 6015 -151 248 98 0 0 chr2 38086938 38086979 -215169604 + L1MB7 LINE L1 6127 6167 -17 * 1921 134 0 28 chr2 38087071 38087361 -215169222 + AluSx SINE Alu 1 282 -30 1186 125 0 11 chr2 38087382 38087558 -215169025 + AluSg/x SINE Alu 129 302 -10 753 240 27 14 chr2 38087763 38087984 -215168599 + L1MEc LINE L1 203 426 -6137 622 285 4 23 chr2 38087976 38088239 -215168344 + L1MEc LINE L1 1290 1547 -4837 * 1790 212 100 42 chr2 38088220 38088271 -215168312 + L1MEc LINE L1 1781 1828 -4735 2400 89 0 0 chr2 38088271 38088573 -215168010 + AluSq SINE Alu 1 302 -11 1790 212 100 42 chr2 38088573 38089181 -215167402 + L1MEc LINE L1 1828 2478 -4085 288 246 0 0 chr2 38089796 38089853 -215166730 + MER58B DNA MER1_type 1 57 -284 * 718 199 68 0 chr2 38089846 38089992 -215166591 + MER58B DNA MER1_type 182 337 -4 1079 299 180 67 chr2 38090039 38091311 -215165272 + L2 LINE L2 983 2580 -692 395 123 0 0 chr2 38091311 38091368 -215165215 + U6 snRNA snRNA 1 57 -50 1079 299 180 67 chr2 38091368 38091904 -215164679 + L2 LINE L2 2580 3054 -218 1722 168 10 27 chr2 38092370 38092668 -215163915 - AluJo SINE Alu -19 293 1 22 35 0 0 chr2 38092829 38092858 -215163725 + AT_rich Low_complexity Low_complexity 1 29 0 484 281 15 40 chr2 38093083 38093243 -215163340 + MIR3 SINE MIR 2 160 -66 2426 60 0 3 chr2 38093295 38093595 -215162988 + AluY SINE Alu 1 299 -12 387 41 0 0 chr2 38093605 38093654 -215162929 + (TA)n Simple_repeat Simple_repeat 2 50 0 183 114 0 0 chr2 38095425 38095460 -215161123 + (A)n Simple_repeat Simple_repeat 1 35 0 2063 137 10 16 chr2 38095620 38095934 -215160649 + AluSx SINE Alu 1 312 0 26 0 0 0 chr2 38096828 38096854 -215159729 + AT_rich Low_complexity Low_complexity 1 26 0 230 268 18 0 chr2 38097509 38097565 -215159018 - L2 LINE L2 -9 3263 3207 251 289 14 113 chr2 38097707 38097849 -215158734 - L2 LINE L2 -199 3073 2946 21 0 0 0 chr2 38098268 38098289 -215158294 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr2 38098598 38098629 -215157954 + AT_rich Low_complexity Low_complexity 1 31 0 2353 101 3 0 chr2 38098737 38099045 -215157538 + AluSp SINE Alu 1 309 -4 262 298 165 54 chr2 38099088 38099176 -215157407 + L2 LINE L2 1698 1775 -1539 2168 113 0 0 chr2 38099176 38099467 -215157116 + AluSc SINE Alu 2 292 -17 262 298 165 54 chr2 38099467 38099874 -215156709 + L2 LINE L2 1775 2248 -1066 237 333 156 52 chr2 38099961 38100249 -215156334 + L2 LINE L2 2432 2749 -565 762 232 170 35 chr2 38100251 38100592 -215155991 + L1MC4 LINE L1 7632 8018 -24 1617 220 0 0 chr2 38100617 38100922 -215155661 + AluJo SINE Alu 1 305 -7 2214 97 17 0 chr2 38101247 38101536 -215155047 + AluSc SINE Alu 1 294 -15 2097 121 20 7 chr2 38101548 38101845 -215154738 + AluSx SINE Alu 1 301 -11 2493 70 0 0 chr2 38102455 38102754 -215153829 + AluY SINE Alu 1 299 -12 2255 105 3 0 chr2 38103155 38103459 -215153124 + AluSp SINE Alu 1 305 -8 2245 99 14 0 chr2 38103876 38104169 -215152414 + AluSx SINE Alu 2 298 -14 1806 167 0 7 chr2 38105605 38105905 -215150678 + AluJo SINE Alu 1 298 -14 653 164 31 23 chr2 38105927 38106055 -215150528 + FLAM_C SINE Alu 1 129 -4 323 297 93 9 chr2 38106155 38106370 -215150213 + L1MC/D LINE L1 5538 5773 -490 231 313 0 0 chr2 38106681 38106748 -215149835 + A-rich Low_complexity Low_complexity 1 67 0 2169 119 0 0 chr2 38106750 38107043 -215149540 + AluSx SINE Alu 1 293 -19 2389 66 0 20 chr2 38107043 38107346 -215149237 + AluSg1 SINE Alu 1 297 -12 2263 102 0 3 chr2 38107768 38108063 -215148520 - AluSg SINE Alu -16 294 1 2366 104 0 0 chr2 38108530 38108827 -215147756 + AluSx SINE Alu 1 297 -15 994 169 47 0 chr2 38108849 38109021 -215147562 - MER5A DNA MER1_type -9 180 1 195 42 0 0 chr2 38109061 38109085 -215147498 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2056 128 16 10 chr2 38109131 38109435 -215147148 + AluSx SINE Alu 1 306 -6 292 163 0 0 chr2 38109472 38109515 -215147068 - Alu SINE Alu -257 43 1 377 269 161 8 chr2 38109907 38110037 -215146546 - L2 LINE L2 0 3272 3123 1728 154 33 0 chr2 38110201 38110500 -215146083 - AluJo SINE Alu 0 308 1 2273 95 7 0 chr2 38110540 38110835 -215145748 - AluSx SINE Alu -15 297 1 587 165 9 18 chr2 38110986 38111095 -215145488 - FRAM SINE Alu -16 160 53 243 0 0 0 chr2 38111440 38111467 -215145116 + (CA)n Simple_repeat Simple_repeat 2 28 0 1013 156 33 47 chr2 38111566 38111778 -215144805 - MER2 DNA MER2_type -136 209 1 814 162 128 7 chr2 38112015 38112163 -215144420 - AluJb SINE Alu -23 289 124 2093 103 10 10 chr2 38112208 38112509 -215144074 + AluY SINE Alu 1 301 -10 1738 164 0 4 chr2 38113175 38113444 -215143139 + AluSx SINE Alu 1 268 -44 26 0 0 0 chr2 38113478 38113504 -215143079 + AT_rich Low_complexity Low_complexity 1 26 0 201 290 87 0 chr2 38113953 38114022 -215142561 - L2 LINE L2 0 3313 3239 33 0 0 0 chr2 38114371 38114404 -215142179 + AT_rich Low_complexity Low_complexity 1 33 0 223 172 17 52 chr2 38115428 38115442 -215141141 + GA-rich Low_complexity Low_complexity 2 15 -42 2319 97 10 3 chr2 38115442 38115753 -215140830 + AluSp SINE Alu 1 313 0 223 172 17 52 chr2 38115753 38115767 -215140816 + GA-rich Low_complexity Low_complexity 15 28 -29 1654 210 0 16 chr2 38115767 38116081 -215140502 + AluJb SINE Alu 1 309 -3 223 172 17 52 chr2 38116081 38116109 -215140474 + GA-rich Low_complexity Low_complexity 28 57 0 2033 153 0 7 chr2 38116524 38116824 -215139759 + AluSx SINE Alu 1 298 -14 198 244 24 0 chr2 38116893 38116934 -215139649 + MIR SINE MIR 47 88 -174 1009 104 0 0 chr2 38117351 38117516 -215139067 - AluSc SINE Alu 0 313 149 627 50 0 0 chr2 38117531 38117611 -215138972 - AluY SINE Alu -231 80 1 239 139 0 0 chr2 38117872 38117915 -215138668 + L1M4 LINE L1 3903 3945 -2201 180 0 0 0 chr2 38117920 38117940 -215138643 + (TTA)n Simple_repeat Simple_repeat 2 21 0 822 163 0 0 chr2 38117940 38118063 -215138520 - FLAM_C SINE Alu -20 123 1 195 369 108 9 chr2 38118333 38118444 -215138139 - L2 LINE L2 0 3272 3151 267 228 139 0 chr2 38118823 38118902 -215137681 + L1MC4 LINE L1 7942 8031 -11 2243 98 0 31 chr2 38118926 38119243 -215137340 + AluY SINE Alu 1 307 -4 1669 177 0 14 chr2 38119251 38119545 -215137038 + AluJb SINE Alu 1 290 -22 2146 110 3 13 chr2 38119934 38120233 -215136350 - AluSq SINE Alu -17 296 1 247 252 147 80 chr2 38120444 38120805 -215135778 + MLT1L LTR MaLR 220 604 -11 253 281 52 47 chr2 38120813 38121005 -215135578 - L1ME LINE L1 -356 5765 5573 2245 114 0 0 chr2 38121079 38121376 -215135207 - AluSx SINE Alu -15 297 1 25 31 0 0 chr2 38121376 38121408 -215135175 + AT_rich Low_complexity Low_complexity 1 32 0 183 42 0 0 chr2 38121767 38121791 -215134792 + (TA)n Simple_repeat Simple_repeat 1 24 0 227 221 104 0 chr2 38121795 38121872 -215134711 - MIR SINE MIR -2 260 176 2122 114 0 0 chr2 38121903 38122192 -215134391 + AluY SINE Alu 1 289 -22 2283 108 0 10 chr2 38122215 38122520 -215134063 + AluSq SINE Alu 1 302 -11 433 309 65 12 chr2 38123137 38123446 -215133137 + L1ME LINE L1 5340 5662 -500 2069 113 14 3 chr2 38123766 38124058 -215132525 + AluSg SINE Alu 1 295 -15 345 255 323 5 chr2 38124061 38124253 -215132330 + L1M4 LINE L1 3723 3975 -2171 2143 111 0 10 chr2 38125279 38125576 -215131007 - AluSc SINE Alu -15 294 1 235 49 49 0 chr2 38125927 38125968 -215130615 + (TA)n Simple_repeat Simple_repeat 1 43 0 333 298 105 24 chr2 38126037 38126161 -215130422 + MIR SINE MIR 18 151 -57 27 0 0 0 chr2 38126351 38126378 -215130205 + AT_rich Low_complexity Low_complexity 1 27 0 2433 84 7 0 chr2 38126470 38126780 -215129803 - AluSx SINE Alu 0 312 1 506 204 19 10 chr2 38126974 38127077 -215129506 + L2 LINE L2 3209 3312 -1 1840 168 6 50 chr2 38127353 38127717 -215128866 + MER7A DNA MER2_type 1 346 0 2368 83 0 0 chr2 38128589 38128878 -215127705 - AluSx SINE Alu -5 307 19 266 338 12 0 chr2 38128968 38129048 -215127535 + L2 LINE L2 3147 3227 -45 23 0 0 0 chr2 38129302 38129325 -215127258 + AT_rich Low_complexity Low_complexity 1 23 0 286 313 209 0 chr2 38130033 38130148 -215126435 - L2 LINE L2 0 3272 3134 1440 173 4 0 chr2 38130169 38130423 -215126160 + MER1B DNA MER1_type 4 258 -81 183 80 0 0 chr2 38130425 38130450 -215126133 + (CA)n Simple_repeat Simple_repeat 2 26 0 190 301 161 21 chr2 38130708 38130801 -215125782 - L2 LINE L2 -209 3063 2958 551 265 43 6 chr2 38130906 38131068 -215125515 + MIR SINE MIR 95 262 0 2450 80 0 0 chr2 38131783 38132082 -215124501 - AluY SINE Alu -12 299 1 853 197 0 28 chr2 38132232 38132410 -215124173 + FAM SINE Alu 3 175 0 2097 162 0 3 chr2 38132609 38132918 -215123665 + AluSx SINE Alu 1 308 -4 2099 122 0 23 chr2 38133016 38133319 -215123264 - AluSq SINE Alu -17 296 1 328 341 77 35 chr2 38133563 38133733 -215122850 + MIR3 SINE MIR 17 193 -15 234 212 12 59 chr2 38133909 38133994 -215122589 + CT-rich Low_complexity Low_complexity 5 85 0 1887 148 51 26 chr2 38134137 38134489 -215122094 - MER46B DNA MER2_type 0 236 1 239 263 126 0 chr2 38134665 38134760 -215121823 - MIR SINE MIR -56 206 100 2013 129 13 10 chr2 38135685 38135987 -215120596 + AluSx SINE Alu 3 305 -7 1302 87 29 0 chr2 38136125 38136298 -215120285 - AluSq SINE Alu -2 311 134 2368 94 7 0 chr2 38136298 38136597 -215119986 - AluSx SINE Alu -8 304 4 456 258 93 90 chr2 38136847 38137219 -215119364 + L1MEc LINE L1 1005 1277 -4928 2214 92 14 0 chr2 38137219 38137513 -215119070 + AluY SINE Alu 1 298 -13 456 258 93 90 chr2 38137513 38137581 -215119002 + L1MEc LINE L1 1277 1343 -4862 378 197 28 0 chr2 38137742 38137813 -215118770 + U6 snRNA snRNA 1 73 -34 652 188 109 30 chr2 38138173 38138338 -215118245 - MER5B DNA MER1_type 0 178 1 385 188 150 53 chr2 38138905 38139038 -215117545 - MIR SINE MIR -12 250 105 1235 166 0 5 chr2 38139262 38139493 -215117090 - AluJb SINE Alu 0 315 86 1808 103 64 67 chr2 38139496 38139808 -215116775 - AluJb SINE Alu -1 311 1 1356 248 152 42 chr2 38139810 38140575 -215116008 + L2 LINE L2 2443 3308 -5 2081 93 65 4 chr2 38140909 38141188 -215115395 - AluSc SINE Alu -13 296 1 1888 117 3 96 chr2 38142056 38142390 -215114193 + AluSx SINE Alu 1 303 -9 734 233 146 31 chr2 38143018 38143306 -215113277 + L2 LINE L2 2988 3308 -5 358 326 8 0 chr2 38143306 38143435 -215113148 - MIR3 SINE MIR -71 137 8 214 125 21 21 chr2 38144716 38144764 -215111819 + (CCG)n Simple_repeat Simple_repeat 2 49 0 24 53 0 0 chr2 38145059 38145097 -215111486 + GC_rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr2 38145129 38145157 -215111426 + GC_rich Low_complexity Low_complexity 1 28 0 270 0 0 0 chr2 38145279 38145309 -215111274 + (CA)n Simple_repeat Simple_repeat 2 31 0 203 329 73 0 chr2 38146562 38146644 -215109939 - MIR3 SINE MIR -26 182 95 573 103 0 0 chr2 38146833 38146911 -215109672 + AluJ/FLAM SINE Alu 2 79 -233 2646 97 10 79 chr2 38146919 38147322 -215109261 + MER51B LTR ERV1 2 376 -1 1540 127 5 0 chr2 38147322 38147542 -215109041 + AluSg/x SINE Alu 76 296 -16 1117 128 6 23 chr2 38147634 38147806 -215108777 + AluSx SINE Alu 3 171 -141 275 294 59 15 chr2 38147806 38147942 -215108641 + MIR SINE MIR 121 262 0 193 279 73 0 chr2 38147956 38148024 -215108559 + MIR SINE MIR 180 252 -10 2266 97 0 3 chr2 38148096 38148394 -215108189 + AluSg SINE Alu 1 297 -13 2138 113 0 13 chr2 38148396 38148705 -215107878 + AluSq SINE Alu 1 305 -8 2468 66 0 10 chr2 38148950 38149251 -215107332 - AluSc SINE Alu -11 298 1 2075 96 10 7 chr2 38149251 38149543 -215107040 - AluSc SINE Alu -15 294 1 1861 129 7 4 chr2 38149644 38149924 -215106659 + AluSx SINE Alu 2 282 -30 258 105 0 0 chr2 38149924 38149962 -215106621 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 275 159 95 0 chr2 38150006 38150069 -215106514 - L1MB8 LINE L1 -245 5933 5865 1907 159 0 7 chr2 38150069 38150377 -215106206 - AluSx SINE Alu -6 306 1 28 61 0 0 chr2 38150951 38151000 -215105583 + AT_rich Low_complexity Low_complexity 1 49 0 2173 112 14 0 chr2 38152343 38152637 -215103946 - AluSx SINE Alu -14 298 1 2395 48 0 27 chr2 38152683 38152975 -215103608 - AluY SINE Alu -27 284 1 229 65 0 0 chr2 38152997 38153043 -215103540 - LTR66 LTR ERVL -171 439 394 309 185 0 0 chr2 38153055 38153120 -215103463 + (TA)n Simple_repeat Simple_repeat 2 66 0 322 258 22 22 chr2 38153121 38153210 -215103373 - L1MC4 LINE L1 -1340 6702 6614 322 311 0 0 chr2 38153134 38153224 -215103359 + L1MC4 LINE L1 6614 6703 -1339 1498 128 145 0 chr2 38153366 38153633 -215102950 + AluSx SINE Alu 9 310 0 884 185 11 28 chr2 38153684 38153862 -215102721 + AluJb SINE Alu 16 190 -122 868 222 6 0 chr2 38153862 38154024 -215102559 + AluJo/FRAM SINE Alu 137 299 -3 183 226 0 0 chr2 38154390 38154421 -215102162 + L2 LINE L2 3210 3240 -32 640 214 0 0 chr2 38154491 38154635 -215101948 - AluJo SINE Alu 0 316 173 660 179 0 0 chr2 38154636 38154742 -215101841 - AluJo SINE Alu -205 107 2 290 349 48 0 chr2 38154945 38155028 -215101555 - MIR SINE MIR -57 151 65 2387 69 0 13 chr2 38155095 38155399 -215101184 + AluY SINE Alu 3 302 -9 2273 93 7 0 chr2 38155412 38155702 -215100881 + AluSx SINE Alu 7 298 -14 829 211 7 7 chr2 38155707 38155859 -215100724 + FRAM SINE Alu 1 152 -14 2499 83 3 0 chr2 38156162 38156474 -215100109 + AluSp SINE Alu 1 313 0 202 182 0 0 chr2 38156522 38156555 -215100028 + polypurine Low_complexity Low_complexity 3 35 0 2420 144 54 61 chr2 38156720 38157064 -215099519 + L1MB8 LINE L1 5573 5918 -260 1936 116 67 0 chr2 38157064 38157348 -215099235 + AluSx SINE Alu 1 303 -9 2420 144 54 61 chr2 38157348 38157362 -215099221 + L1MB8 LINE L1 5918 5931 -247 1960 143 0 3 chr2 38157362 38157656 -215098927 + AluJb SINE Alu 11 303 -9 2420 144 54 61 chr2 38157656 38157891 -215098692 + L1MB8 LINE L1 5931 6124 -54 1364 162 81 13 chr2 38157891 38158126 -215098457 - AluJo SINE Alu -57 255 5 821 183 14 14 chr2 38158247 38158389 -215098194 + AluJb SINE Alu 137 278 -34 225 0 0 0 chr2 38158392 38158417 -215098166 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 2235 97 16 7 chr2 38158426 38158735 -215097848 + AluSx SINE Alu 1 312 0 489 165 110 0 chr2 38158805 38158896 -215097687 + FRAM SINE Alu 73 173 -3 362 287 0 70 chr2 38159023 38159166 -215097417 + L2 LINE L2 3176 3308 -5 453 50 0 0 chr2 38161232 38161292 -215095291 + (CA)n Simple_repeat Simple_repeat 2 61 0 532 208 28 56 chr2 38161309 38161453 -215095130 + L2 LINE L2 3173 3312 -1 2181 72 7 41 chr2 38161632 38161946 -215094637 + AluSp SINE Alu 6 309 0 1205 108 0 12 chr2 38161951 38162118 -215094465 + AluSg/x SINE Alu 126 290 -20 25 0 0 0 chr2 38162166 38162191 -215094392 + AT_rich Low_complexity Low_complexity 1 25 0 2466 74 0 3 chr2 38162297 38162596 -215093987 + AluSq SINE Alu 1 298 -15 207 0 0 0 chr2 38162596 38162619 -215093964 + (TA)n Simple_repeat Simple_repeat 2 24 0 2156 114 0 29 chr2 38163829 38164145 -215092438 - AluSg SINE Alu -3 307 1 181 309 107 0 chr2 38164484 38164568 -215092015 - L2 LINE L2 -54 3259 3167 2214 114 3 0 chr2 38165000 38165297 -215091286 - AluSx SINE Alu -14 298 1 1005 128 0 0 chr2 38165300 38165433 -215091150 - AluSq/x SINE Alu -180 133 1 263 250 119 0 chr2 38165434 38165518 -215091065 + L1ME LINE L1 5589 5682 -439 1971 142 28 0 chr2 38165527 38165816 -215090767 + AluSx SINE Alu 1 297 -15 1842 158 7 10 chr2 38166171 38166468 -215090115 + AluJb SINE Alu 5 300 -12 2124 122 3 7 chr2 38166638 38166941 -215089642 - AluSc SINE Alu -6 303 2 2377 94 0 0 chr2 38167467 38167764 -215088819 - AluSc SINE Alu -12 297 1 185 91 0 30 chr2 38168066 38168099 -215088484 + (GGAA)n Simple_repeat Simple_repeat 2 33 0 201 304 22 33 chr2 38168182 38168274 -215088309 - MER5A DNA MER1_type -28 161 71 2099 97 47 17 chr2 38168275 38168575 -215088008 - AluSg SINE Alu -1 309 1 886 128 0 28 chr2 38169229 38169370 -215087213 - FLAM_C SINE Alu -6 137 1 22 56 0 0 chr2 38169506 38169542 -215087041 + AT_rich Low_complexity Low_complexity 1 36 0 1804 107 118 11 chr2 38169625 38169895 -215086688 + AluSg SINE Alu 1 299 -11 1595 132 119 4 chr2 38170328 38170606 -215085977 + AluSg1 SINE Alu 1 307 0 1867 172 0 0 chr2 38170689 38170985 -215085598 + AluJb SINE Alu 11 306 -6 39 38 0 0 chr2 38171076 38171129 -215085454 + AT_rich Low_complexity Low_complexity 1 53 0 1411 192 4 4 chr2 38171150 38171405 -215085178 - AluJo SINE Alu -57 255 1 560 219 71 20 chr2 38171445 38171613 -215084970 + L1MC4a LINE L1 6701 6908 -877 2006 133 0 35 chr2 38171630 38171946 -215084637 + AluSx SINE Alu 1 305 -7 2147 208 146 55 chr2 38171972 38172680 -215083903 + L1MC4 LINE L1 7270 8041 -1 25 0 0 0 chr2 38173101 38173126 -215083457 + AT_rich Low_complexity Low_complexity 1 25 0 2384 83 3 0 chr2 38173130 38173430 -215083153 - AluY SINE Alu -10 301 1 2063 125 20 3 chr2 38173468 38173763 -215082820 - AluSg SINE Alu -10 300 1 1018 160 0 0 chr2 38174277 38174433 -215082150 - AluJb SINE Alu -23 289 134 2201 101 7 3 chr2 38174442 38174739 -215081844 - AluSg SINE Alu -12 298 1 1672 137 54 73 chr2 38174797 38174982 -215081601 - AluSq SINE Alu -4 309 131 2297 86 3 3 chr2 38174982 38175272 -215081311 - AluSp SINE Alu -23 290 1 1672 137 54 73 chr2 38175272 38175401 -215081182 - AluSq SINE Alu -182 131 1 1752 180 0 13 chr2 38175559 38175865 -215080718 - AluJo SINE Alu -6 306 5 2406 71 0 0 chr2 38175945 38176241 -215080342 - AluY SINE Alu -10 301 6 648 303 107 18 chr2 38176609 38177070 -215079513 + L1MC/D LINE L1 5300 5803 -735 25 0 0 0 chr2 38177217 38177242 -215079341 + AT_rich Low_complexity Low_complexity 1 25 0 2321 85 0 20 chr2 38177313 38177619 -215078964 + AluSg SINE Alu 1 300 -10 1999 142 0 3 chr2 38177776 38178071 -215078512 + AluSx SINE Alu 1 294 -18 2140 134 0 3 chr2 38178111 38178418 -215078165 + AluSg SINE Alu 1 306 -4 2063 108 7 30 chr2 38178459 38178756 -215077827 - AluSx SINE Alu -22 290 1 399 328 124 21 chr2 38179661 38179902 -215076681 - L3 LINE CR1 -5 1572 1307 825 112 0 9 chr2 38179903 38180019 -215076564 + MER30B DNA MER1_type 1 115 -75 2173 110 13 10 chr2 38180038 38180347 -215076236 - AluSx SINE Alu -2 310 1 345 162 73 0 chr2 38181216 38181284 -215075299 - MER116 DNA Mariner 0 80 8 1759 154 19 26 chr2 38181357 38181669 -215074914 + AluSx SINE Alu 1 310 -2 901 206 12 0 chr2 38181669 38181834 -215074749 + AluJo/FRAM SINE Alu 134 300 -12 607 331 74 39 chr2 38183251 38183726 -215072857 + L2 LINE L2 2595 3085 -228 2265 101 19 0 chr2 38184745 38185052 -215071531 + AluSp SINE Alu 1 313 0 2128 104 34 3 chr2 38185718 38186015 -215070568 - AluSx SINE Alu -6 306 1 2431 94 0 0 chr2 38187358 38187667 -215068916 + AluSc SINE Alu 1 309 0 1945 129 24 14 chr2 38187682 38187976 -215068607 + AluJo SINE Alu 4 300 -12 1820 126 0 4 chr2 38188900 38189161 -215067422 - AluSx SINE Alu -19 293 34 184 336 39 94 chr2 38189218 38189346 -215067237 - L2 LINE L2 -3 3269 3149 229 275 87 0 chr2 38189458 38189527 -215067056 + L2 LINE L2 3198 3272 0 24 0 0 0 chr2 38189836 38189860 -215066723 + AT_rich Low_complexity Low_complexity 1 24 0 609 270 14 19 chr2 38190175 38190386 -215066197 - L1ME LINE L1 -391 5730 5521 237 286 51 10 chr2 38190650 38190748 -215065835 - L1ME LINE L1 -373 5748 5647 2296 85 3 3 chr2 38190775 38191070 -215065513 - AluSq SINE Alu -18 295 1 192 355 95 71 chr2 38191153 38191449 -215065134 + L2 LINE L2 2966 3268 -4 340 279 25 0 chr2 38191523 38191602 -215064981 + Tigger7 DNA MER2_type 1 81 -258 712 203 0 0 chr2 38191784 38191917 -215064666 + FLAM_A SINE Alu 1 133 0 2192 98 0 3 chr2 38192556 38192842 -215063741 - AluY SINE Alu -26 285 1 2142 94 27 20 chr2 38193077 38193376 -215063207 + AluSc SINE Alu 1 301 -8 426 354 70 74 chr2 38193529 38194449 -215062134 - L2 LINE L2 -419 2895 1980 2312 96 3 0 chr2 38194490 38194791 -215061792 - AluY SINE Alu -9 302 1 692 250 64 67 chr2 38194792 38195120 -215061463 - MER46C DNA MER2_type 0 338 12 21 0 0 0 chr2 38195200 38195221 -215061362 + AT_rich Low_complexity Low_complexity 1 21 0 1689 109 4 35 chr2 38195526 38195783 -215060800 + AluSx SINE Alu 44 292 -20 2318 94 0 7 chr2 38195786 38196094 -215060489 + AluSq SINE Alu 4 309 -4 2039 121 7 7 chr2 38197260 38197558 -215059025 + AluSg SINE Alu 1 298 -12 1677 179 0 0 chr2 38197826 38198100 -215058483 - AluJb SINE Alu -1 311 38 2180 124 0 3 chr2 38198278 38198585 -215057998 - AluSx SINE Alu -6 306 1 288 189 0 0 chr2 38199507 38199560 -215057023 - MER58 DNA MER1_type -1 2419 2367 400 126 136 29 chr2 38199562 38199665 -215056918 + MER4C LTR ERV1 3 116 -349 944 217 79 90 chr2 38199746 38199987 -215056596 + LTR34 LTR ERV1 136 378 -321 2058 127 7 0 chr2 38199987 38200286 -215056297 + AluJb SINE Alu 1 301 -11 944 217 79 90 chr2 38200286 38200530 -215056053 + LTR34 LTR ERV1 378 695 -4 2206 103 0 7 chr2 38200564 38200855 -215055728 - AluSg SINE Alu -19 291 3 886 230 12 0 chr2 38200858 38201023 -215055560 - MER58A DNA MER1_type 0 168 2 1589 233 34 26 chr2 38201113 38201641 -215054942 + L1MEc LINE L1 628 1159 -5237 1891 148 3 28 chr2 38201867 38202185 -215054398 + AluSx SINE Alu 1 310 -2 3088 156 52 0 chr2 38202310 38202908 -215053675 + L1MA8 LINE L1 5660 6288 -3 186 43 0 0 chr2 38204233 38204256 -215052327 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2246 175 42 28 chr2 38204303 38204800 -215051783 + MLT1D LTR MaLR 1 504 -1 391 354 66 55 chr2 38204812 38205086 -215051497 + L2 LINE L2 2990 3266 -6 2085 103 3 20 chr2 38205192 38205484 -215051099 - AluSx SINE Alu -25 287 1 196 247 78 91 chr2 38205667 38205744 -215050839 + MIR3 SINE MIR 101 176 -32 36 23 0 0 chr2 38206608 38206651 -215049932 + AT_rich Low_complexity Low_complexity 1 43 0 217 188 21 0 chr2 38206963 38207011 -215049572 + (TA)n Simple_repeat Simple_repeat 1 49 0 2223 93 0 0 chr2 38207762 38208040 -215048543 + AluSq SINE Alu 1 278 -35 1901 127 18 0 chr2 38208041 38208356 -215048227 + AluSg SINE Alu 3 322 0 251 260 0 0 chr2 38208719 38208796 -215047787 - L1ME LINE L1 -237 5884 5808 527 317 42 15 chr2 38208878 38209140 -215047443 - L1ME LINE L1 -469 5652 5384 2173 206 124 0 chr2 38209183 38209682 -215046901 + MER68 LTR ERV1 2 562 0 30 83 0 0 chr2 38209706 38209778 -215046805 + AT_rich Low_complexity Low_complexity 1 72 0 643 122 37 19 chr2 38209806 38209913 -215046670 - FLAM_A SINE Alu 0 142 34 195 100 0 0 chr2 38210631 38210661 -215045922 + (CTTA)n Simple_repeat Simple_repeat 2 31 0 814 231 0 0 chr2 38210664 38210811 -215045772 - FRAM SINE Alu -30 146 1 189 107 0 0 chr2 38211226 38211254 -215045329 + (TA)n Simple_repeat Simple_repeat 2 29 0 2286 92 7 0 chr2 38211255 38211559 -215045024 - AluSq SINE Alu -7 306 1 752 253 116 0 chr2 38212036 38212269 -215044314 + MIR SINE MIR 2 261 -1 1628 58 0 0 chr2 38212495 38212686 -215043897 - AluY SINE Alu -120 191 1 530 157 49 20 chr2 38212687 38212712 -215043871 - AluJb SINE Alu -16 296 273 2848 7 0 0 chr2 38212712 38213020 -215043563 + AluYa5 SINE Alu 1 308 -3 530 157 49 20 chr2 38213020 38213096 -215043487 - AluJb SINE Alu -39 273 192 900 169 0 0 chr2 38213096 38213238 -215043345 - AluJo SINE Alu -170 142 1 266 363 18 26 chr2 38213345 38213458 -215043125 + MIR SINE MIR 93 204 -58 227 247 12 24 chr2 38213602 38213687 -215042896 + HsTC2 DNA Tc2 14 97 -1801 680 254 90 25 chr2 38213687 38213966 -215042617 - L1ME LINE L1 -1234 4912 4616 848 314 146 57 chr2 38213979 38214897 -215041686 + L2 LINE L2 2008 3048 -224 2211 115 0 0 chr2 38214897 38215192 -215041391 - AluSq SINE Alu -18 295 1 848 314 146 57 chr2 38215192 38215439 -215041144 + L2 LINE L2 3048 3272 0 2267 84 3 0 chr2 38215539 38215823 -215040760 - AluSg SINE Alu -25 285 1 1287 126 54 9 chr2 38215950 38216172 -215040411 + L1MA3 LINE L1 6067 6298 -7 27 0 0 0 chr2 38216422 38216449 -215040134 + AT_rich Low_complexity Low_complexity 1 27 0 2354 96 0 0 chr2 38216518 38216820 -215039763 - AluSx SINE Alu -10 302 1 734 93 9 7 chr2 38217064 38217280 -215039303 + AluSx SINE Alu 22 280 -30 800 129 0 50 chr2 38217419 38217559 -215039024 + FLAM_C SINE Alu 1 133 0 2143 94 42 3 chr2 38217565 38217851 -215038732 + AluSg SINE Alu 1 297 -13 349 304 93 19 chr2 38217863 38218024 -215038559 + MIR SINE MIR 41 213 -49 212 307 29 7 chr2 38218170 38218259 -215038324 + MIR SINE MIR 45 133 -75 235 290 50 60 chr2 38218514 38218614 -215037969 + MIR SINE MIR 164 262 0 1707 171 7 0 chr2 38219845 38220158 -215036425 + AluJb SINE Alu 1 315 0 25 31 0 0 chr2 38220265 38220297 -215036286 + AT_rich Low_complexity Low_complexity 1 32 0 287 158 72 0 chr2 38220545 38220614 -215035969 - L1ME1 LINE L1 -34 6130 6058 428 183 0 19 chr2 38220620 38220641 -215035942 - MER33 DNA MER1_type -2261 363 343 7807 126 35 19 chr2 38220641 38220990 -215035593 + HSMAR2 DNA Mariner 1 343 -959 2233 112 7 0 chr2 38220990 38221293 -215035290 + AluSx SINE Alu 1 305 -7 7807 126 35 19 chr2 38221293 38222220 -215034363 + HSMAR2 DNA Mariner 343 1298 -4 428 183 0 19 chr2 38222220 38222302 -215034281 - MER33 DNA MER1_type -2281 343 262 329 216 68 14 chr2 38222301 38222375 -215034208 - AluSq/x SINE Alu -177 125 48 * 1160 155 32 5 chr2 38222373 38222633 -215033950 - MER33 DNA MER1_type -89 235 1 2083 215 43 8 chr2 38222634 38223122 -215033461 - L1ME1 LINE L1 -143 6023 5519 354 252 44 57 chr2 38223131 38223290 -215033293 - L1MDb LINE L1 -5001 1428 1115 3125 232 85 16 chr2 38223362 38224353 -215032230 - L1MDb LINE L1 -5283 1324 266 2307 109 0 0 chr2 38224737 38225039 -215031544 + AluSq SINE Alu 1 302 -11 2022 122 48 0 chr2 38225148 38225443 -215031140 + AluSx SINE Alu 1 309 -3 748 199 0 0 chr2 38225443 38225574 -215031009 + FLAM_A SINE Alu 1 131 -2 236 229 92 42 chr2 38225627 38225752 -215030831 + MIR SINE MIR 74 205 -57 429 224 46 33 chr2 38226237 38226389 -215030194 - MER104 DNA Tc2 0 180 27 1887 172 0 0 chr2 38226569 38226865 -215029718 - AluJb SINE Alu -16 296 1 23 0 0 0 chr2 38227003 38227026 -215029557 + AT_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr2 38228231 38228251 -215028332 + (A)n Simple_repeat Simple_repeat 1 20 0 1729 164 0 7 chr2 38228279 38228554 -215028029 - AluJo SINE Alu -20 292 20 1914 129 3 26 chr2 38229139 38229442 -215027141 + AluSc SINE Alu 1 296 -13 2465 89 0 0 chr2 38229456 38229759 -215026824 + AluSc SINE Alu 1 303 -6 2411 97 0 0 chr2 38230109 38230420 -215026163 - AluSx SINE Alu -1 311 1 3975 181 15 24 chr2 38230646 38231386 -215025197 - MER44D DNA MER2_type 0 605 1 181 265 82 0 chr2 38232249 38232298 -215024285 + L2 LINE L2 3209 3261 -11 25 65 0 0 chr2 38232500 38232546 -215024037 + AT_rich Low_complexity Low_complexity 1 46 0 2331 64 48 0 chr2 38232565 38232860 -215023723 - AluSp SINE Alu -3 310 2 2223 106 7 0 chr2 38232861 38233163 -215023420 - AluSq SINE Alu -9 304 1 207 202 12 60 chr2 38233620 38233704 -215022879 + (TTTA)n Simple_repeat Simple_repeat 4 83 0 355 319 67 7 chr2 38233749 38233884 -215022699 + MIR3 SINE MIR 48 190 -18 780 181 0 8 chr2 38234011 38234144 -215022439 - FLAM_C SINE Alu -11 132 1 225 65 0 0 chr2 38235389 38235420 -215021163 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 618 191 18 0 chr2 38236112 38236222 -215020361 + FLAM_A SINE Alu 3 114 -19 24 67 0 0 chr2 38236247 38236292 -215020291 + AT_rich Low_complexity Low_complexity 1 45 0 566 311 70 25 chr2 38236456 38236697 -215019886 + MIR SINE MIR 8 259 -3 22 0 0 0 chr2 38237215 38237237 -215019346 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr2 38237418 38237448 -215019135 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr2 38237732 38237761 -215018822 + AT_rich Low_complexity Low_complexity 1 29 0 381 43 0 0 chr2 38237774 38237781 -215018802 + (TG)n Simple_repeat Simple_repeat 1 54 0 381 43 0 0 chr2 38237781 38237828 -215018755 + (TG)n Simple_repeat Simple_repeat 2 48 0 2139 115 20 0 chr2 38237845 38238140 -215018443 - AluSx SINE Alu -11 301 1 300 333 137 24 chr2 38238691 38238859 -215017724 + MIR3 SINE MIR 21 207 -1 217 228 35 0 chr2 38239485 38239542 -215017041 + (CATATA)n Simple_repeat Simple_repeat 1 59 0 2136 117 0 10 chr2 38240525 38240824 -215015759 + AluSx SINE Alu 1 296 -16 355 268 268 0 chr2 38240913 38241070 -215015513 + MIR SINE MIR 2 200 -62 1665 176 3 42 chr2 38241171 38241478 -215015105 - AluJo SINE Alu -15 297 3 267 194 60 0 chr2 38241547 38241614 -215014969 - MIR SINE MIR 0 262 192 2287 117 0 7 chr2 38242187 38242494 -215014089 - AluSx SINE Alu -7 305 1 1123 153 67 24 chr2 38242660 38242869 -215013714 - AluJo SINE Alu -9 303 86 1907 144 39 0 chr2 38243705 38243989 -215012594 - AluSx SINE Alu -17 295 1 748 292 49 21 chr2 38244559 38244802 -215011781 + MIR SINE MIR 13 262 0 1958 152 0 14 chr2 38245257 38245554 -215011029 - AluSx SINE Alu -19 293 1 275 387 0 19 chr2 38245616 38245722 -215010861 + L2 LINE L2 3150 3253 -19 2120 137 0 9 chr2 38245867 38246182 -215010401 + AluSx SINE Alu 1 312 0 188 307 148 0 chr2 38246454 38246555 -215010028 + L2 LINE L2 3190 3305 -8 22 0 0 0 chr2 38248095 38248117 -215008466 + AT_rich Low_complexity Low_complexity 1 22 0 2269 104 0 7 chr2 38248281 38248580 -215008003 - AluSx SINE Alu -15 297 1 537 280 109 33 chr2 38249289 38249500 -215007083 + MIR SINE MIR 15 241 -21 191 245 19 38 chr2 38249466 38249511 -215007072 + L2 LINE L2 3253 3298 -15 * 306 0 0 0 chr2 38249511 38249545 -215007038 + (CAT)n Simple_repeat Simple_repeat 1 34 0 236 363 108 0 chr2 38249562 38249664 -215006919 - MIR SINE MIR -69 139 27 2289 98 0 10 chr2 38250057 38250364 -215006219 - AluSg SINE Alu -6 304 1 742 220 78 5 chr2 38250699 38250890 -215005693 + L1ME1 LINE L1 37 241 -6155 * 2476 240 75 7 chr2 38250887 38251763 -215004820 + L1ME1 LINE L1 3059 3994 -2221 1245 105 0 6 chr2 38251763 38251925 -215004658 - AluSx SINE Alu -151 161 1 259 247 25 0 chr2 38251926 38252007 -215004576 - L1MD2 LINE L1 -145 6214 6132 * 2781 202 61 38 chr2 38251990 38252421 -215004162 + L1ME1 LINE L1 4510 4930 -1305 2367 70 7 7 chr2 38252421 38252722 -215003861 + AluY SINE Alu 1 301 -10 2781 202 61 38 chr2 38252722 38253775 -215002808 + L1ME1 LINE L1 4930 6031 -204 22 35 0 0 chr2 38253775 38253804 -215002779 + AT_rich Low_complexity Low_complexity 1 29 0 249 190 350 30 chr2 38254561 38254661 -215001922 + L2 LINE L2 3182 3313 0 1120 216 41 25 chr2 38254693 38255012 -215001571 + MLT1C LTR MaLR 144 467 0 2042 117 10 17 chr2 38255686 38255986 -215000597 - AluSx SINE Alu -14 298 1 261 276 23 46 chr2 38256399 38256486 -215000097 + MIR SINE MIR 3 87 -175 200 378 0 31 chr2 38256592 38256690 -214999893 - MIR SINE MIR -148 114 20 349 323 126 19 chr2 38257112 38257375 -214999208 + L2 LINE L2 2109 2399 -915 2063 284 163 14 chr2 38258346 38259271 -214997312 - L2 LINE L2 -234 3079 2004 305 310 92 14 chr2 38259425 38259567 -214997016 - L2 LINE L2 -1341 1973 1821 901 60 0 0 chr2 38259604 38259721 -214996862 - L1PA5 LINE L1 -6 6148 6032 1219 261 160 32 chr2 38259867 38260434 -214996149 + HAL1 LINE L1 220 876 -1631 2219 105 0 31 chr2 38260434 38260757 -214995826 - AluSq SINE Alu 0 313 1 1219 261 160 32 chr2 38260757 38260813 -214995770 + HAL1 LINE L1 876 923 -1584 2814 96 76 5 chr2 38260824 38261270 -214995313 + MER9 LTR ERVK 34 511 0 581 275 18 42 chr2 38261357 38261524 -214995059 - L2 LINE L2 -2047 1267 1105 781 207 130 49 chr2 38263170 38263455 -214993128 + L2 LINE L2 2305 2612 -702 220 321 107 9 chr2 38263637 38263749 -214992834 + MIR SINE MIR 81 203 -59 1928 230 49 28 chr2 38264061 38264590 -214991993 - MLT1F LTR MaLR -2 593 1 2204 122 0 13 chr2 38264881 38265185 -214991398 + AluSx SINE Alu 1 300 -12 243 267 35 0 chr2 38265223 38265309 -214991274 - MLT1K LTR MaLR 0 588 500 303 276 41 16 chr2 38265367 38265490 -214991093 - MLT1K LTR MaLR -186 402 277 328 341 77 35 chr2 38265965 38266135 -214990448 + MIR3 SINE MIR 17 193 -15 234 212 12 59 chr2 38266311 38266396 -214990187 + CT-rich Low_complexity Low_complexity 5 85 0 1887 148 51 26 chr2 38266539 38266891 -214989692 - MER46B DNA MER2_type 0 236 1 239 263 126 0 chr2 38267067 38267162 -214989421 - MIR SINE MIR -56 206 100 2003 133 13 10 chr2 38268087 38268389 -214988194 + AluSx SINE Alu 3 305 -7 1120 127 29 0 chr2 38268527 38268700 -214987883 - AluSq SINE Alu -2 311 134 2155 127 7 0 chr2 38268700 38268999 -214987584 - AluSx SINE Alu -8 304 4 269 299 66 46 chr2 38269279 38269621 -214986962 + L1MEc LINE L1 1047 1400 -4996 2207 92 14 0 chr2 38269621 38269915 -214986668 + AluY SINE Alu 1 298 -13 269 299 66 46 chr2 38269915 38269983 -214986600 + L1MEc LINE L1 1400 1465 -4931 348 176 29 0 chr2 38270144 38270212 -214986371 + U6 snRNA snRNA 1 70 -37 583 194 109 30 chr2 38270575 38270740 -214985843 - MER5B DNA MER1_type 0 178 1 394 200 117 122 chr2 38271307 38271512 -214985071 - MIR SINE MIR -12 250 47 1241 166 0 5 chr2 38271664 38271895 -214984688 - AluJb SINE Alu 0 315 86 1824 109 64 67 chr2 38271898 38272210 -214984373 - AluJb SINE Alu -1 311 1 1351 250 152 42 chr2 38272212 38272977 -214983606 + L2 LINE L2 2443 3308 -5 2079 93 65 4 chr2 38273311 38273590 -214982993 - AluSc SINE Alu -13 296 1 1894 117 3 96 chr2 38274458 38274792 -214981791 + AluSx SINE Alu 1 303 -9 731 233 146 31 chr2 38275420 38275708 -214980875 + L2 LINE L2 2988 3308 -5 373 326 8 0 chr2 38275708 38275837 -214980746 - MIR3 SINE MIR -71 137 8 312 300 103 88 chr2 38277018 38277547 -214979036 + L1M2 LINE L1 526 966 -5883 307 313 209 26 chr2 38277232 38277619 -214978964 - L1M2 LINE L1 -5591 1258 801 * 270 0 0 0 chr2 38277681 38277711 -214978872 + (CA)n Simple_repeat Simple_repeat 2 31 0 209 329 73 0 chr2 38278964 38279046 -214977537 - MIR3 SINE MIR -26 182 95 540 101 0 0 chr2 38279234 38279313 -214977270 + AluJ/FLAM SINE Alu 1 79 -233 2453 97 10 79 chr2 38279321 38279724 -214976859 + MER51B LTR ERV1 2 376 -1 1549 127 5 0 chr2 38279724 38279944 -214976639 + AluSg/x SINE Alu 76 296 -16 1120 128 6 23 chr2 38280036 38280208 -214976375 + AluSx SINE Alu 3 171 -141 293 294 59 15 chr2 38280208 38280344 -214976239 + MIR SINE MIR 121 262 0 199 279 73 0 chr2 38280358 38280426 -214976157 + MIR SINE MIR 180 252 -10 2263 97 0 3 chr2 38280498 38280796 -214975787 + AluSg SINE Alu 1 297 -13 2134 113 0 13 chr2 38280798 38281107 -214975476 + AluSq SINE Alu 1 305 -8 2303 101 3 0 chr2 38281355 38281653 -214974930 - AluSq SINE Alu -14 299 1 1311 74 42 23 chr2 38282335 38282550 -214974033 + L1MA2 LINE L1 6086 6304 0 1789 147 21 4 chr2 38282568 38282847 -214973736 + AluJb SINE Alu 3 286 -26 261 0 0 0 chr2 38282848 38282877 -214973706 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 24 0 0 0 chr2 38282882 38282906 -214973677 + AT_rich Low_complexity Low_complexity 1 24 0 2140 102 23 16 chr2 38283028 38283333 -214973250 + AluSx SINE Alu 1 307 -5 285 227 91 83 chr2 38283629 38283652 -214972931 - MIR SINE MIR -11 251 230 2104 120 3 3 chr2 38283652 38283951 -214972632 + AluSg SINE Alu 1 299 -11 285 227 91 83 chr2 38283951 38284059 -214972524 - MIR SINE MIR -32 230 119 215 245 0 0 chr2 38284357 38284410 -214972173 + A-rich Low_complexity Low_complexity 1 53 0 878 193 28 47 chr2 38284695 38284949 -214971634 + L1ME1 LINE L1 5767 6015 -151 248 98 0 0 chr2 38284942 38284983 -214971600 + L1MB7 LINE L1 6127 6167 -17 * 1921 134 0 28 chr2 38285075 38285365 -214971218 + AluSx SINE Alu 1 282 -30 1186 125 0 11 chr2 38285386 38285562 -214971021 + AluSg/x SINE Alu 127 300 -10 753 240 27 14 chr2 38285767 38285988 -214970595 + L1MEc LINE L1 203 426 -6137 622 285 4 23 chr2 38285980 38286243 -214970340 + L1MEc LINE L1 1290 1547 -4837 * 1790 212 100 42 chr2 38286224 38286275 -214970308 + L1MEc LINE L1 1781 1828 -4735 2400 89 0 0 chr2 38286275 38286577 -214970006 + AluSq SINE Alu 1 302 -11 1790 212 100 42 chr2 38286577 38287185 -214969398 + L1MEc LINE L1 1828 2478 -4085 288 246 0 0 chr2 38287800 38287857 -214968726 + MER58B DNA MER1_type 1 57 -284 * 718 199 68 0 chr2 38287850 38287996 -214968587 + MER58B DNA MER1_type 182 337 -4 1079 299 180 67 chr2 38288043 38289315 -214967268 + L2 LINE L2 983 2580 -692 395 123 0 0 chr2 38289315 38289372 -214967211 + U6 snRNA snRNA 1 57 -50 1079 299 180 67 chr2 38289372 38289908 -214966675 + L2 LINE L2 2580 3054 -218 1722 168 10 27 chr2 38290374 38290672 -214965911 - AluJo SINE Alu -19 293 1 22 35 0 0 chr2 38290833 38290862 -214965721 + AT_rich Low_complexity Low_complexity 1 29 0 484 281 15 40 chr2 38291087 38291247 -214965336 + MIR3 SINE MIR 2 160 -66 2426 60 0 3 chr2 38291299 38291599 -214964984 + AluY SINE Alu 1 299 -12 387 41 0 0 chr2 38291609 38291658 -214964925 + (TA)n Simple_repeat Simple_repeat 1 49 0 183 114 0 0 chr2 38293429 38293464 -214963119 + (A)n Simple_repeat Simple_repeat 1 35 0 2063 137 10 16 chr2 38293624 38293938 -214962645 + AluSx SINE Alu 1 312 0 26 0 0 0 chr2 38294832 38294858 -214961725 + AT_rich Low_complexity Low_complexity 1 26 0 230 268 18 0 chr2 38295513 38295569 -214961014 - L2 LINE L2 -9 3263 3207 251 289 14 113 chr2 38295711 38295853 -214960730 - L2 LINE L2 -199 3073 2946 21 0 0 0 chr2 38296272 38296293 -214960290 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr2 38296602 38296633 -214959950 + AT_rich Low_complexity Low_complexity 1 31 0 2353 101 3 0 chr2 38296741 38297049 -214959534 + AluSp SINE Alu 1 309 -4 262 298 165 54 chr2 38297092 38297180 -214959403 + L2 LINE L2 1698 1775 -1539 2168 113 0 0 chr2 38297180 38297471 -214959112 + AluSc SINE Alu 2 292 -17 262 298 165 54 chr2 38297471 38297878 -214958705 + L2 LINE L2 1775 2248 -1066 237 333 156 52 chr2 38297965 38298253 -214958330 + L2 LINE L2 2432 2749 -565 762 232 170 35 chr2 38298255 38298596 -214957987 + L1MC4 LINE L1 7632 8018 -24 1617 220 0 0 chr2 38298621 38298926 -214957657 + AluJo SINE Alu 1 305 -7 2214 97 17 0 chr2 38299251 38299540 -214957043 + AluSc SINE Alu 1 294 -15 1908 133 27 7 chr2 38299552 38299845 -214956738 + AluSx SINE Alu 1 299 -13 264 171 0 40 chr2 38300002 38300078 -214956505 + GA-rich Low_complexity Low_complexity 4 76 0 1524 187 10 34 chr2 38300175 38300469 -214956114 + AluJb SINE Alu 4 290 -22 756 298 66 68 chr2 38300558 38301146 -214955437 + L1MEc LINE L1 141 727 -5669 190 275 169 48 chr2 38301759 38301915 -214954668 - L2 LINE L2 -1069 2245 2061 1740 141 33 30 chr2 38301915 38302214 -214954369 + AluSx SINE Alu 1 300 -12 190 275 169 48 chr2 38302214 38302246 -214954337 - L2 LINE L2 -1253 2061 2034 1487 122 22 97 chr2 38302276 38302423 -214954160 - L1MB5 LINE L1 -205 5969 5812 1886 59 62 11 chr2 38302423 38302696 -214953887 - AluY SINE Alu -24 287 1 1487 122 22 97 chr2 38302696 38302918 -214953665 - L1MB5 LINE L1 -362 5812 5628 667 279 168 26 chr2 38303735 38304183 -214952400 - L2 LINE L2 -89 3224 2702 309 198 0 0 chr2 38304321 38304417 -214952166 + A-rich Low_complexity Low_complexity 1 96 0 191 136 62 0 chr2 38304464 38304545 -214952038 + (CACAC)n Simple_repeat Simple_repeat 3 88 0 5720 87 11 2 chr2 38304681 38305499 -214951084 + HERVFH19I LTR ERV1 6792 7616 -103 877 211 6 17 chr2 38305666 38305846 -214950737 - FRAM SINE Alu -6 170 1 25 51 0 0 chr2 38305960 38305999 -214950584 + AT_rich Low_complexity Low_complexity 1 39 0 2176 81 0 23 chr2 38306209 38306519 -214950064 + AluSc SINE Alu 1 303 -6 266 241 51 58 chr2 38306524 38306661 -214949922 + MLT1J LTR MaLR 374 509 -2 1352 147 9 14 chr2 38307306 38307524 -214949059 - AluJb SINE Alu -15 297 81 323 235 0 12 chr2 38307524 38307605 -214948978 + MER103 DNA DNA 77 156 -10 2019 105 11 11 chr2 38307773 38308097 -214948486 - AluSx SINE Alu 0 324 1 2308 244 115 23 chr2 38308166 38309165 -214947418 + L2 LINE L2 1975 3062 -251 598 253 0 0 chr2 38309165 38309319 -214947264 - FRAM SINE Alu -2 174 21 1519 159 12 8 chr2 38309507 38309765 -214946818 - AluJb SINE Alu -13 299 41 2196 101 16 0 chr2 38309777 38310085 -214946498 - AluSp SINE Alu 0 313 1 804 272 120 62 chr2 38310125 38310516 -214946067 + MLT1G3 LTR MaLR 13 460 -107 378 252 19 28 chr2 38310605 38310712 -214945871 + MIR3 SINE MIR 61 166 -42 1701 181 0 11 chr2 38311530 38311817 -214944766 - AluJb SINE Alu -28 284 1 1991 141 7 0 chr2 38312220 38312517 -214944066 - AluJb SINE Alu -13 299 1 2142 84 18 7 chr2 38312522 38312806 -214943777 - AluSc SINE Alu -22 287 1 278 265 20 48 chr2 38312813 38312960 -214943623 - L1ME LINE L1 -299 5822 5680 1641 158 4 4 chr2 38312976 38313235 -214943348 - AluJb SINE Alu -13 299 41 2249 100 10 3 chr2 38313247 38313558 -214943025 - AluSp SINE Alu 0 313 1 804 285 50 50 chr2 38313598 38314081 -214942502 + MLT1G3 LTR MaLR 13 560 -7 447 221 19 19 chr2 38314093 38314197 -214942386 + MIR3 SINE MIR 73 176 -32 1672 82 137 4 chr2 38315375 38315630 -214940953 + AluSx SINE Alu 1 289 -23 234 176 72 24 chr2 38315932 38316057 -214940526 + (TAA)n Simple_repeat Simple_repeat 1 131 0 403 268 98 45 chr2 38316630 38316968 -214939615 - L1 LINE L1 -2841 3305 2896 564 195 0 34 chr2 38317024 38317142 -214939441 + FLAM_C SINE Alu 11 124 -19 203 161 0 0 chr2 38317658 38317689 -214938894 + (TG)n Simple_repeat Simple_repeat 2 32 0 2196 116 0 0 chr2 38317765 38318059 -214938524 - AluSx SINE Alu -18 294 1 912 99 70 7 chr2 38318638 38318780 -214937803 + AluSc SINE Alu 152 302 -7 452 302 119 7 chr2 38319051 38319329 -214937254 + HERVL LTR ERVL 3868 4176 -1478 601 148 6 9 chr2 38319691 38319858 -214936725 + MLT1A1 LTR MaLR 2 211 -163 2269 117 7 0 chr2 38319858 38320211 -214936372 + AluSx SINE Alu 1 355 0 436 279 84 0 chr2 38320361 38320576 -214936007 - L1ME LINE L1 -663 5501 5269 663 164 15 15 chr2 38320667 38320801 -214935782 - FLAM_C SINE Alu -4 139 6 2255 88 7 0 chr2 38321029 38321326 -214935257 + AluSg SINE Alu 1 299 -11 23 0 0 0 chr2 38321944 38321967 -214934616 + AT_rich Low_complexity Low_complexity 1 23 0 1292 186 0 21 chr2 38321991 38322233 -214934350 - AluJb SINE Alu -9 303 67 2170 110 3 3 chr2 38322233 38322523 -214934060 + AluSg SINE Alu 1 290 -20 271 241 0 0 chr2 38322624 38322678 -214933905 + Tigger3(Golem) DNA MER2_type 2985 3038 0 * 795 174 0 0 chr2 38322678 38322809 -214933774 - MER2 DNA MER2_type -214 131 1 1997 58 68 0 chr2 38323659 38323985 -214932598 - L1PA4 LINE L1 -3 6152 5805 551 146 126 0 chr2 38324364 38324467 -214932116 + AluSq/x SINE Alu 1 116 -196 2561 166 68 72 chr2 38328050 38328819 -214927764 + Tigger6a DNA MER2_type 2 758 -325 316 356 104 0 chr2 38329114 38329229 -214927354 + MIR SINE MIR 20 146 -116 2065 118 3 19 chr2 38329263 38329576 -214927007 - AluSg1 SINE Alu -1 308 1 266 273 18 25 chr2 38329807 38329947 -214926636 + MLT1L LTR MaLR 3 142 -369 2175 107 3 3 chr2 38329967 38330257 -214926326 + AluSx SINE Alu 1 290 -22 1380 113 247 8 chr2 38330297 38330536 -214926047 + AluSg SINE Alu 1 296 -4 238 220 0 0 chr2 38330999 38331049 -214925534 + (TAA)n Simple_repeat Simple_repeat 3 52 0 2329 97 10 0 chr2 38331058 38331357 -214925226 + AluSx SINE Alu 1 302 -10 588 211 192 6 chr2 38331359 38331515 -214925068 - MIR SINE MIR -16 246 62 433 206 0 69 chr2 38331522 38331653 -214924930 + MER3 DNA MER1_type 41 162 -47 1136 200 99 0 chr2 38331663 38332018 -214924565 + MER3 DNA MER1_type 2235 2624 0 337 289 52 60 chr2 38332838 38333070 -214923513 - L2 LINE L2 -1 3312 3083 522 328 53 3 chr2 38333255 38333575 -214923008 + L2 LINE L2 2640 2975 -339 2228 110 0 0 chr2 38333703 38333993 -214922590 - AluSx SINE Alu -11 301 12 238 297 31 23 chr2 38334778 38334906 -214921677 + MER112 DNA MER1_type 119 247 -13 531 203 28 28 chr2 38336224 38336367 -214920216 + L1MEc LINE L1 1836 1978 -4418 326 297 118 9 chr2 38336367 38336596 -214919987 + L1MB5 LINE L1 5564 5817 -345 33 56 0 0 chr2 38336611 38336665 -214919918 + AT_rich Low_complexity Low_complexity 1 54 0 672 169 6 88 chr2 38336715 38336840 -214919743 + L1MB5 LINE L1 6012 6117 -54 2428 76 0 7 chr2 38336840 38337144 -214919439 + AluSq SINE Alu 1 302 -11 672 169 6 88 chr2 38337144 38337195 -214919388 + L1MB5 LINE L1 6117 6171 0 464 238 70 35 chr2 38337373 38337545 -214919038 + L2 LINE L2 1933 2110 -1204 943 240 0 5 chr2 38337561 38337761 -214918822 - MER58A DNA MER1_type 0 224 26 1106 290 56 31 chr2 38337765 38338251 -214918332 - L2 LINE L2 -49 3264 2766 587 60 12 0 chr2 38338251 38338335 -214918248 + (TTTC)n Simple_repeat Simple_repeat 4 88 0 2313 68 3 7 chr2 38338684 38338978 -214917605 - AluY SINE Alu -18 293 1 288 265 62 6 chr2 38338980 38339142 -214917441 + Charlie1 DNA MER1_type 2590 2760 -1 1742 161 10 16 chr2 38339178 38339482 -214917101 - AluJb SINE Alu -10 302 1 243 194 10 87 chr2 38340636 38340739 -214915844 - L1MC5 LINE L1 -30 7931 7837 540 228 277 0 chr2 38341118 38341320 -214915263 - MIR SINE MIR 0 262 5 1906 156 0 14 chr2 38341470 38341765 -214914818 - AluJb SINE Alu -21 291 1 2318 103 0 3 chr2 38342640 38342941 -214913642 - AluSx SINE Alu -12 300 1 239 336 71 14 chr2 38343823 38343963 -214912620 - L2 LINE L2 -920 2394 2247 791 233 140 84 chr2 38344294 38344595 -214911988 - L2 LINE L2 -720 2594 2258 2270 80 10 17 chr2 38344595 38344897 -214911686 + AluY SINE Alu 1 300 -11 791 233 140 84 chr2 38344897 38345046 -214911537 - L2 LINE L2 -1056 2258 2119 1510 224 97 32 chr2 38345051 38345342 -214911241 + Charlie4a DNA MER1_type 2 337 -1624 1837 170 0 16 chr2 38345342 38345648 -214910935 - AluSx SINE Alu -11 301 1 1510 224 97 32 chr2 38345648 38345830 -214910753 + Charlie4a DNA MER1_type 337 506 -2 701 258 127 64 chr2 38346505 38347022 -214909561 + L2 LINE L2 2598 3149 -164 1611 120 0 0 chr2 38347026 38347251 -214909332 - AluSc SINE Alu -1 308 84 474 287 33 96 chr2 38347719 38348090 -214908493 - L2 LINE L2 -223 3049 2034 962 111 0 0 chr2 38348437 38348563 -214908020 + AluSx SINE Alu 2 127 -186 503 55 55 0 chr2 38348563 38348636 -214907947 + MADE1 DNA Mariner 1 77 -3 1219 137 0 0 chr2 38348636 38348811 -214907772 + AluSx SINE Alu 126 300 -12 425 262 153 70 chr2 38349013 38349242 -214907341 - L3 LINE CR1 -3 1574 1327 1999 121 7 7 chr2 38349383 38349680 -214906903 + AluJo SINE Alu 1 297 -15 530 338 192 25 chr2 38349914 38350159 -214906424 - L3 LINE CR1 -757 820 617 1890 171 0 0 chr2 38350159 38350463 -214906120 - AluSx SINE Alu -8 304 1 530 338 192 25 chr2 38350463 38350806 -214905777 - L3 LINE CR1 -960 617 134 1949 113 22 0 chr2 38351807 38352109 -214904474 + AluY SINE Alu 1 308 0 273 263 6 103 chr2 38352654 38352810 -214903773 + MLT1J LTR MaLR 325 465 -46 331 313 38 31 chr2 38353135 38353295 -214903288 - MIR SINE MIR -5 257 97 1291 281 67 18 chr2 38353297 38353788 -214902795 - LTR38 LTR ERV1 -41 515 1 216 0 0 0 chr2 38353967 38353991 -214902592 + (A)n Simple_repeat Simple_repeat 1 24 0 1013 230 16 24 chr2 38354113 38354425 -214902158 - LTR28 LTR ERV1 -141 495 342 471 248 12 14 chr2 38354430 38354652 -214901931 + LTR28 LTR ERV1 564 827 -193 312 155 0 119 chr2 38354908 38354992 -214901591 - HsTC2 DNA Tc2 -1820 78 5 191 151 75 38 chr2 38355034 38355087 -214901496 - MIR SINE MIR -100 162 108 1935 134 3 24 chr2 38355885 38356175 -214900408 + AluSx SINE Alu 3 286 -26 21 36 0 0 chr2 38356175 38356203 -214900380 + AT_rich Low_complexity Low_complexity 1 28 0 876 69 0 0 chr2 38356277 38356393 -214900190 + (GAA)n Simple_repeat Simple_repeat 2 117 0 324 183 50 0 chr2 38356888 38356948 -214899635 - Alu SINE Alu -7 294 232 1093 100 0 7 chr2 38356949 38357089 -214899494 - AluSq/x SINE Alu -173 139 1 2072 133 0 10 chr2 38357540 38357552 -214899031 - AluSx SINE Alu -14 298 287 903 67 0 0 chr2 38357552 38357671 -214898912 + (TTCC)n Simple_repeat Simple_repeat 1 119 0 2072 133 0 10 chr2 38357671 38357959 -214898624 - AluSx SINE Alu -25 287 1 247 125 0 0 chr2 38358047 38358087 -214898496 + MLT1A1 LTR MaLR 4 43 -322 362 175 93 52 chr2 38358512 38358536 -214898047 - MER5A DNA MER1_type -80 109 87 2234 83 0 20 chr2 38358536 38358836 -214897747 - AluY SINE Alu -17 294 1 362 175 93 52 chr2 38358836 38358908 -214897675 - MER5A DNA MER1_type -102 87 9 224 320 144 7 chr2 38358949 38359102 -214897481 + MIR SINE MIR 37 210 -52 300 251 243 22 chr2 38359714 38359981 -214896602 + LTR65 LTR ERV1 323 648 -21 229 103 51 0 chr2 38360083 38360122 -214896461 - tRNA-Gly-GGA tRNA tRNA -34 41 1 2059 94 31 3 chr2 38360299 38360586 -214895997 + AluSx SINE Alu 1 295 -17 1898 129 7 3 chr2 38360588 38360891 -214895692 + AluSx SINE Alu 1 304 -8 1221 120 112 56 chr2 38361593 38361826 -214894757 + AluJo SINE Alu 13 258 -54 1117 157 47 178 chr2 38363262 38363600 -214892983 + AluJo SINE Alu 1 294 -8 2392 112 0 0 chr2 38365072 38365414 -214891169 + AluSx SINE Alu 1 342 0 1738 200 147 7 chr2 38366277 38366749 -214889834 - L1MB7 LINE L1 -1 6183 5660 445 104 15 30 chr2 38366964 38366980 -214889603 - AluJo SINE Alu -163 149 134 2437 92 0 0 chr2 38366980 38367285 -214889298 - AluSc SINE Alu -4 305 1 445 104 15 30 chr2 38367285 38367335 -214889248 - AluJo SINE Alu -178 134 84 2854 87 95 7 chr2 38367933 38368345 -214888238 + LTR7 LTR ERV1 1 448 -2 599 153 20 0 chr2 38368732 38368830 -214887753 + MLT2B3 LTR ERVL 101 200 -354 442 59 0 15 chr2 38368866 38368934 -214887649 + L1PBa LINE L1 1 67 -6796 15136 170 40 9 chr2 38368958 38369063 -214887520 + L1PB1 LINE L1 2527 2627 -4240 1942 156 7 0 chr2 38369063 38369365 -214887218 - AluSx SINE Alu -8 304 1 15136 170 40 9 chr2 38369365 38373481 -214883102 + L1PB1 LINE L1 2627 6862 -5 249 221 116 0 chr2 38374858 38374944 -214881639 + MER103 DNA DNA 64 159 -7 1062 142 74 159 chr2 38375461 38375770 -214880813 + AluJo SINE Alu 16 298 -14 2042 143 0 7 chr2 38376116 38376423 -214880160 - AluSx SINE Alu -7 305 1 267 267 267 9 chr2 38378190 38378295 -214878288 + MIR3 SINE MIR 42 173 -35 361 207 82 59 chr2 38378537 38378672 -214877911 + L1MC5 LINE L1 7794 7931 -30 1780 161 7 16 chr2 38379825 38380130 -214876453 + AluJb SINE Alu 1 302 -10 3639 199 149 50 chr2 38380166 38380330 -214876253 - Charlie1 DNA MER1_type -1 2760 2614 2589 68 0 0 chr2 38380330 38380641 -214875942 + AluY SINE Alu 1 311 0 3639 199 149 50 chr2 38380641 38380695 -214875888 - Charlie1 DNA MER1_type -147 2614 2567 2582 64 0 0 chr2 38380695 38381006 -214875577 + AluY SINE Alu 1 311 0 3639 199 149 50 chr2 38381006 38381336 -214875247 - Charlie1 DNA MER1_type -194 2567 2271 1590 126 142 8 chr2 38381336 38381590 -214874993 + AluSx SINE Alu 6 293 -19 3639 199 149 50 chr2 38381590 38382367 -214874216 - Charlie1 DNA MER1_type -490 2271 1 2343 89 0 0 chr2 38382746 38383039 -214873544 + AluSc SINE Alu 1 293 -16 1827 154 0 20 chr2 38383418 38383711 -214872872 + AluJb SINE Alu 1 287 -25 1722 168 16 16 chr2 38383747 38384056 -214872527 + AluJo SINE Alu 1 309 -3 2261 96 0 0 chr2 38384711 38384991 -214871592 + AluSx SINE Alu 1 280 -32 195 42 0 0 chr2 38384991 38385015 -214871568 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 276 216 81 0 chr2 38385554 38385628 -214870955 - MIR SINE MIR -86 176 97 262 229 43 43 chr2 38386799 38386869 -214869714 + L2 LINE L2 3200 3269 -44 255 305 152 48 chr2 38386861 38387130 -214869453 - L3 LINE CR1 -288 1289 993 * 318 26 0 0 chr2 38387749 38387788 -214868795 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 223 368 0 0 chr2 38387936 38388023 -214868560 + MIR SINE MIR 25 111 -151 8308 55 1 0 chr2 38388027 38388992 -214867591 + LTR5 LTR ERVK 1 966 -3 242 214 0 0 chr2 38389171 38389213 -214867370 + MIR SINE MIR 60 101 -161 193 313 45 0 chr2 38389217 38389284 -214867299 - MIR SINE MIR -77 185 116 317 314 69 0 chr2 38389327 38389429 -214867154 - MIR SINE MIR -151 111 3 339 214 120 34 chr2 38389706 38389823 -214866760 + L2 LINE L2 3183 3309 -4 195 42 0 0 chr2 38391930 38391954 -214864629 + (CA)n Simple_repeat Simple_repeat 2 25 0 1369 246 52 75 chr2 38392074 38392433 -214864150 + L1MC4a LINE L1 5307 5646 -2162 1408 152 82 30 chr2 38392433 38392703 -214863880 - AluJb SINE Alu -28 284 1 1369 246 52 75 chr2 38392703 38392984 -214863599 + L1MC4a LINE L1 5646 5932 -1876 793 282 159 18 chr2 38393220 38393731 -214862852 + L2 LINE L2 2630 3224 -89 780 233 140 84 chr2 38395756 38396057 -214860526 - L2 LINE L2 -720 2594 2258 2341 75 20 0 chr2 38396057 38396350 -214860233 + AluSg SINE Alu 1 299 -11 780 233 140 84 chr2 38396350 38396499 -214860084 - L2 LINE L2 -1056 2258 2119 1478 215 97 34 chr2 38396504 38396796 -214859787 + Charlie4a DNA MER1_type 2 337 -1624 1823 177 0 7 chr2 38396796 38397101 -214859482 - AluSx SINE Alu -9 303 1 1478 215 97 34 chr2 38397101 38397283 -214859300 + Charlie4a DNA MER1_type 337 506 -2 733 178 0 0 chr2 38397985 38398114 -214858469 - L1ME3A LINE L1 -7 6163 6035 2196 94 0 14 chr2 38398349 38398667 -214857916 - AluY SINE Alu 0 314 1 351 235 20 59 chr2 38399094 38399204 -214857379 + GA-rich Low_complexity Low_complexity 6 110 -42 2360 69 0 16 chr2 38399204 38399508 -214857075 + AluY SINE Alu 1 299 -12 351 235 20 59 chr2 38399508 38399550 -214857033 + GA-rich Low_complexity Low_complexity 110 152 0 2298 102 3 0 chr2 38399675 38399979 -214856604 - AluSp SINE Alu -8 305 1 1336 249 43 85 chr2 38400770 38400867 -214855716 + L1ME3A LINE L1 5011 5110 -1060 1974 82 36 75 chr2 38400867 38401173 -214855410 + AluSg SINE Alu 1 294 -16 783 137 0 65 chr2 38401178 38401317 -214855266 + FLAM_C SINE Alu 1 130 -3 1336 249 43 85 chr2 38401317 38401816 -214854767 + L1ME3A LINE L1 5114 5557 -613 2061 154 0 0 chr2 38401816 38402128 -214854455 - AluSx SINE Alu 0 312 1 1336 249 43 85 chr2 38402128 38402508 -214854075 + L1ME3A LINE L1 5557 5951 -219 1507 176 103 0 chr2 38402858 38403130 -214853453 + AluJb SINE Alu 1 300 -12 27 0 0 0 chr2 38403204 38403231 -214853352 + AT_rich Low_complexity Low_complexity 1 27 0 820 156 0 0 chr2 38405707 38405835 -214850748 - FLAM_A SINE Alu -5 128 1 2095 133 0 3 chr2 38405878 38406179 -214850404 + AluSx SINE Alu 1 300 -12 310 212 263 0 chr2 38407042 38407141 -214849442 - MIR SINE MIR 0 262 138 248 243 340 28 chr2 38407792 38407936 -214848647 - MIR SINE MIR -40 222 34 244 136 68 51 chr2 38408333 38408392 -214848191 - L2 LINE L2 0 3313 3254 398 272 72 33 chr2 38409452 38409582 -214847001 - MER5A DNA MER1_type -2 187 47 2058 129 31 47 chr2 38409582 38409968 -214846615 - L1PA16 LINE L1 0 6166 5787 398 272 72 33 chr2 38409968 38410017 -214846566 - MER5A DNA MER1_type -142 47 1 204 302 32 0 chr2 38410682 38410745 -214845838 - MER5A DNA MER1_type -116 73 9 2220 106 3 0 chr2 38411342 38411634 -214844949 + AluSp SINE Alu 1 293 -20 1416 98 0 0 chr2 38412078 38412262 -214844321 + AluSq SINE Alu 75 258 -55 405 0 0 0 chr2 38412268 38412313 -214844270 + (CA)n Simple_repeat Simple_repeat 2 46 0 315 0 0 0 chr2 38412353 38412388 -214844195 + (CA)n Simple_repeat Simple_repeat 2 36 0 1007 106 82 12 chr2 38412684 38412854 -214843729 - MER30 DNA MER1_type -48 182 1 24 53 0 0 chr2 38413904 38413942 -214842641 + AT_rich Low_complexity Low_complexity 1 38 0 523 255 120 30 chr2 38414009 38414209 -214842374 + MIR SINE MIR 1 218 -44 239 296 53 61 chr2 38414408 38414540 -214842043 - MIR SINE MIR -69 193 63 24 0 0 0 chr2 38414685 38414709 -214841874 + AT_rich Low_complexity Low_complexity 1 24 0 195 69 0 0 chr2 38415544 38415573 -214841010 + (TA)n Simple_repeat Simple_repeat 1 29 0 21 36 0 0 chr2 38416621 38416649 -214839934 + AT_rich Low_complexity Low_complexity 1 28 0 642 216 312 0 chr2 38417209 38417408 -214839175 + MIR SINE MIR 2 262 0 1790 169 13 25 chr2 38418433 38418747 -214837836 + AluJb SINE Alu 1 310 -2 187 196 22 0 chr2 38418929 38418975 -214837608 - L2 LINE L2 -417 2855 2809 279 0 0 0 chr2 38419338 38419369 -214837214 + (T)n Simple_repeat Simple_repeat 1 31 0 290 182 216 23 chr2 38419988 38420076 -214836507 + L2 LINE L2 3163 3267 -5 2468 74 0 6 chr2 38420093 38420404 -214836179 + AluY SINE Alu 1 309 -2 270 297 31 23 chr2 38421691 38421819 -214834764 - MER112 DNA MER1_type -13 247 119 2079 132 3 3 chr2 38422592 38422887 -214833696 + AluSx SINE Alu 1 295 -17 2158 126 0 0 chr2 38423914 38424208 -214832375 + AluSx SINE Alu 1 294 -18 2423 71 3 0 chr2 38424208 38424503 -214832080 + AluSp SINE Alu 1 296 -17 1533 143 96 35 chr2 38424505 38424848 -214831735 + MER47A DNA MER2_type 1 364 -2 724 275 180 48 chr2 38425482 38426125 -214830458 - L1M4 LINE L1 -2688 3458 2731 1217 299 30 30 chr2 38427005 38427443 -214829140 - L2 LINE L2 0 3313 2876 213 197 0 82 chr2 38427613 38427674 -214828909 + L3 LINE CR1 1519 1574 -3 246 32 0 0 chr2 38428198 38428229 -214828354 + (CA)n Simple_repeat Simple_repeat 2 32 0 205 301 72 12 chr2 38428259 38428342 -214828241 + MIR SINE MIR 20 107 -155 1172 123 0 0 chr2 38429037 38429199 -214827384 - AluSp SINE Alu -15 298 137 2058 134 0 3 chr2 38429199 38429497 -214827086 - AluSq SINE Alu -16 297 1 231 306 59 24 chr2 38430766 38430851 -214825732 - L2 LINE L2 0 3313 3226 333 331 69 70 chr2 38431122 38431745 -214824838 - L2 LINE L2 -10 3262 2587 354 295 80 46 chr2 38431754 38431929 -214824654 - MIR SINE MIR -46 216 38 2225 105 3 0 chr2 38432655 38432951 -214823632 + AluSp SINE Alu 1 297 -16 1343 217 76 3 chr2 38433952 38434212 -214822371 + MER58B DNA MER1_type 1 289 -2131 1866 146 56 9 chr2 38434212 38434534 -214822049 + MER1B DNA MER1_type 1 337 0 1343 217 76 3 chr2 38434534 38434587 -214821996 + MER58B DNA MER1_type 289 337 -4 207 319 51 97 chr2 38434614 38434871 -214821712 + L2 LINE L2 2869 3113 -159 21 0 0 0 chr2 38434902 38434923 -214821660 + AT_rich Low_complexity Low_complexity 1 21 0 270 132 75 0 chr2 38435289 38435342 -214821241 + L1MC/D LINE L1 5747 5803 -2005 1476 151 36 4 chr2 38435437 38435689 -214820894 + AluJo SINE Alu 23 282 -30 338 279 299 0 chr2 38436770 38436924 -214819659 - MIR SINE MIR -34 228 29 188 196 0 20 chr2 38438810 38438861 -214817722 + (CATA)n Simple_repeat Simple_repeat 1 50 0 1110 281 47 7 chr2 38438878 38439330 -214817253 - L1MC/D LINE L1 -757 5389 5192 302 264 66 11 chr2 38439468 38439559 -214817024 - L1MC4 LINE L1 -1333 6709 6614 259 255 21 32 chr2 38439559 38439653 -214816930 - L1MC/D LINE L1 -1191 4955 4863 949 220 116 22 chr2 38439876 38440108 -214816475 - MIR SINE MIR -7 255 2 2362 82 3 0 chr2 38441368 38441671 -214814912 + AluSc SINE Alu 3 306 -3 2269 91 27 0 chr2 38442758 38443054 -214813529 - AluSq SINE Alu -9 304 1 2185 190 46 8 chr2 38443181 38443879 -214812704 + L1M4 LINE L1 4834 5561 -617 241 61 0 0 chr2 38443875 38443908 -214812675 - L1M LINE L1 -701 5420 5388 * 1510 167 145 19 chr2 38444101 38444425 -214812158 + MLT1A1 LTR MaLR 1 365 0 903 222 91 17 chr2 38444708 38444938 -214811645 + MIR SINE MIR 8 254 -8 210 119 0 153 chr2 38445459 38445518 -214811065 + MIR SINE MIR 97 146 -62 590 150 88 18 chr2 38445899 38446012 -214810571 + MER5A DNA MER1_type 1 121 -68 480 129 0 13 chr2 38446414 38446631 -214809952 + AluSx SINE Alu 1 303 -9 22 0 0 0 chr2 38446966 38446988 -214809595 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 38447486 38447507 -214809076 + AT_rich Low_complexity Low_complexity 1 21 0 1230 20 14 0 chr2 38447507 38447654 -214808929 - L1PA4 LINE L1 -4 6151 6003 267 385 21 0 chr2 38448407 38448503 -214808080 + MIR SINE MIR 13 110 -152 274 200 0 35 chr2 38448524 38448609 -214807974 + (CTA)n Simple_repeat Simple_repeat 1 82 0 207 312 64 0 chr2 38449315 38449424 -214807159 - MIR SINE MIR -13 249 134 2533 70 3 0 chr2 38449658 38450001 -214806582 + AluSp SINE Alu 1 344 0 189 171 0 0 chr2 38450064 38450099 -214806484 + T-rich Low_complexity Low_complexity 2 36 0 317 250 75 0 chr2 38450356 38450436 -214806147 + L2 LINE L2 3227 3312 -1 337 284 11 11 chr2 38451380 38451475 -214805108 + MIR SINE MIR 44 138 -70 2222 98 0 13 chr2 38451491 38451797 -214804786 + AluSg SINE Alu 9 310 0 22 56 0 0 chr2 38452242 38452278 -214804305 + AT_rich Low_complexity Low_complexity 1 36 0 744 171 196 0 chr2 38452428 38452586 -214803997 + MER5A DNA MER1_type 1 189 0 1171 177 25 0 chr2 38452635 38452838 -214803745 + MER58B DNA MER1_type 131 338 -3 2244 81 3 17 chr2 38452945 38453243 -214803340 - AluSq SINE Alu -19 294 1 255 336 86 23 chr2 38453366 38453494 -214803089 - MIR3 SINE MIR -66 142 7 2385 63 7 10 chr2 38455052 38455355 -214801228 - AluY SINE Alu -9 302 1 1585 164 27 37 chr2 38455355 38455654 -214800929 - AluJb SINE Alu -14 298 3 1701 159 14 14 chr2 38456816 38457105 -214799478 - AluJo SINE Alu -23 289 1 27 29 0 0 chr2 38457114 38457148 -214799435 + AT_rich Low_complexity Low_complexity 1 34 0 34 65 0 0 chr2 38457352 38457414 -214799169 + AT_rich Low_complexity Low_complexity 1 62 0 1981 149 0 13 chr2 38457502 38457803 -214798780 + AluSx SINE Alu 1 297 -15 273 326 42 0 chr2 38457872 38457967 -214798616 - L2 LINE L2 -51 3221 3123 22 0 0 0 chr2 38457989 38458011 -214798572 + AT_rich Low_complexity Low_complexity 1 22 0 488 289 23 35 chr2 38458257 38458441 -214798142 + MIR SINE MIR 42 221 -41 2339 78 0 10 chr2 38459325 38459633 -214796950 + AluY SINE Alu 1 305 -6 214 311 74 33 chr2 38459863 38459985 -214796598 - MER5A DNA MER1_type 0 189 63 3926 168 43 20 chr2 38460032 38460828 -214795755 - L1MC3 LINE L1 -2 7783 6970 27 0 0 0 chr2 38460836 38460863 -214795720 + AT_rich Low_complexity Low_complexity 1 27 0 461 152 123 51 chr2 38461015 38461153 -214795430 - L1MC3 LINE L1 -1866 5942 5795 330 266 174 0 chr2 38461168 38461277 -214795306 + MIR SINE MIR 77 204 -58 3913 166 4 9 chr2 38461290 38461978 -214794605 - L1 LINE L1 -1650 4496 3812 461 254 0 0 chr2 38461975 38462097 -214794486 + L1MA4 LINE L1 5039 5160 -986 * 750 179 8 0 chr2 38462097 38462220 -214794363 + AluSq/x SINE Alu 1 124 -189 441 0 0 0 chr2 38462221 38462270 -214794313 + (CA)n Simple_repeat Simple_repeat 2 50 0 5968 139 23 9 chr2 38462270 38463390 -214793193 + L1MA4 LINE L1 5161 6300 0 888 273 84 20 chr2 38463434 38463826 -214792757 - L1MC3 LINE L1 -2075 5733 5317 789 203 33 0 chr2 38464154 38464307 -214792276 - AluJo SINE Alu -8 294 137 703 190 190 0 chr2 38464558 38464742 -214791841 + MER20 DNA MER1_type 1 219 0 649 167 15 45 chr2 38465435 38465532 -214791051 - AluJo SINE Alu -184 128 34 2296 208 208 54 chr2 38465532 38466416 -214790167 + LTR28 LTR ERV1 1 1020 0 649 167 15 45 chr2 38466416 38466450 -214790133 - AluJo SINE Alu -278 34 1 359 289 37 7 chr2 38466533 38466668 -214789915 - L1ME3 LINE L1 -8 6154 6016 222 277 145 12 chr2 38466826 38466909 -214789674 + L2 LINE L2 3200 3293 -20 2181 122 10 3 chr2 38467168 38467479 -214789104 + AluSq SINE Alu 1 313 0 344 240 190 10 chr2 38468545 38468740 -214787843 - MIR SINE MIR -18 244 25 1944 143 3 3 chr2 38469236 38469536 -214787047 + AluJb SINE Alu 1 300 -12 953 173 120 0 chr2 38469714 38469905 -214786678 - MER20 DNA MER1_type 0 219 6 1918 106 3 93 chr2 38471142 38471464 -214785119 - AluSq SINE Alu -20 293 1 33 25 0 0 chr2 38471858 38471898 -214784685 + AT_rich Low_complexity Low_complexity 1 40 0 2332 86 0 10 chr2 38472274 38472577 -214784006 + AluSc SINE Alu 1 300 -9 499 308 201 5 chr2 38473011 38473225 -214783358 - MIR SINE MIR -5 257 2 210 248 9 138 chr2 38473247 38473356 -214783227 - L2 LINE L2 0 3272 3178 293 281 94 16 chr2 38474068 38474196 -214782387 + L2 LINE L2 3171 3308 -5 24 53 0 0 chr2 38474343 38474381 -214782202 + AT_rich Low_complexity Low_complexity 1 38 0 308 270 196 0 chr2 38474501 38474649 -214781934 - MER5B DNA MER1_type -1 177 1 2312 173 23 50 chr2 38475192 38475677 -214780906 - MER82 DNA MER2_type -181 472 1 631 235 109 65 chr2 38475697 38475812 -214780771 + L1MEc LINE L1 1941 2050 -4346 1019 225 28 0 chr2 38475812 38476030 -214780553 - MER58A DNA MER1_type 0 224 1 631 235 109 65 chr2 38476030 38476374 -214780209 + L1MEc LINE L1 2050 2420 -3976 443 197 0 0 chr2 38476422 38476498 -214780085 + Tigger5 DNA MER2_type 2 77 -2246 385 176 95 0 chr2 38476557 38476631 -214779952 + Tigger5 DNA MER2_type 2243 2323 0 894 218 32 11 chr2 38476658 38476938 -214779645 + L1MEc LINE L1 2468 2753 -3462 385 170 32 0 chr2 38477248 38477342 -214779241 + L1MA8 LINE L1 6191 6287 -4 27 73 0 0 chr2 38477449 38477504 -214779079 + AT_rich Low_complexity Low_complexity 1 55 0 1968 121 0 26 chr2 38478429 38478734 -214777849 - AluSx SINE Alu -15 297 1 586 178 0 0 chr2 38480507 38480597 -214775986 - 5S rRNA rRNA -31 90 1 374 368 8 8 chr2 38481092 38481217 -214775366 - MIR SINE MIR -67 141 17 227 383 11 11 chr2 38481421 38481515 -214775068 + L3 LINE CR1 35 128 -1449 186 265 15 29 chr2 38481619 38481687 -214774896 + L3 LINE CR1 262 328 -1249 587 239 175 1 chr2 38481739 38481928 -214774655 - MIR SINE MIR 0 262 39 386 331 277 29 chr2 38482022 38482617 -214773966 + L3 LINE CR1 577 1319 -258 229 325 67 42 chr2 38482620 38482740 -214773843 + MIR SINE MIR 137 259 -3 481 291 126 30 chr2 38482761 38482991 -214773592 - MIR SINE MIR -6 256 5 212 250 0 0 chr2 38483000 38483040 -214773543 + L3 LINE CR1 1400 1439 -138 2334 104 0 0 chr2 38483133 38483441 -214773142 - AluSx SINE Alu -4 308 1 224 263 13 66 chr2 38484060 38484136 -214772447 - MIR3 SINE MIR -47 161 90 549 326 63 78 chr2 38484255 38484586 -214771997 - L2 LINE L2 -5 3267 2942 48 32 0 0 chr2 38487530 38487592 -214768991 + GC_rich Low_complexity Low_complexity 1 62 0 1730 161 20 16 chr2 38488476 38488780 -214767803 - AluJo SINE Alu -7 305 1 420 127 0 0 chr2 38489900 38489963 -214766620 - AluS SINE Alu -246 63 1 241 293 147 0 chr2 38490297 38490372 -214766211 + L2 LINE L2 2555 2640 -674 230 0 0 32 chr2 38490572 38490603 -214765980 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 879 125 0 0 chr2 38490603 38490723 -214765860 - AluSq/x SINE Alu -192 120 1 202 333 96 30 chr2 38491089 38491224 -214765359 + L2 LINE L2 2387 2530 -784 1708 122 43 79 chr2 38491410 38491714 -214764869 + AluSx SINE Alu 1 293 -19 2401 77 0 3 chr2 38491963 38492275 -214764308 + AluSq SINE Alu 1 311 -2 1101 151 6 0 chr2 38492276 38492455 -214764128 + AluSg/x SINE Alu 133 312 0 1911 121 0 50 chr2 38492563 38492901 -214763682 + AluSx SINE Alu 1 323 0 336 309 139 0 chr2 38492983 38493132 -214763451 + MIR SINE MIR 16 181 -59 231 36 0 0 chr2 38493132 38493160 -214763423 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 697 284 28 19 chr2 38493187 38493402 -214763181 + MIR SINE MIR 44 260 -2 214 301 27 0 chr2 38493962 38494035 -214762548 - L2 LINE L2 0 3313 3239 38 0 0 0 chr2 38494444 38494482 -214762101 + AT_rich Low_complexity Low_complexity 1 38 0 805 125 0 0 chr2 38494482 38494586 -214761997 - U6 snRNA snRNA -3 104 1 707 140 59 15 chr2 38494586 38494722 -214761861 - L1MB7 LINE L1 -42 6142 6001 286 241 62 62 chr2 38494772 38494884 -214761699 - LTR16C LTR ERVL -379 112 1 450 370 65 12 chr2 38494941 38495263 -214761320 + L2 LINE L2 2309 2647 -667 194 340 42 35 chr2 38495766 38495910 -214760673 - L2 LINE L2 -1374 1940 1796 4598 149 29 9 chr2 38496029 38496802 -214759781 + L1MB3 LINE L1 5395 6182 -1 2417 81 7 0 chr2 38497473 38497770 -214758813 + AluSp SINE Alu 1 299 -14 2131 131 0 3 chr2 38497815 38498112 -214758471 - AluSx SINE Alu -16 296 1 266 284 40 14 chr2 38499677 38499751 -214756832 + MIR SINE MIR 82 157 -105 1760 149 0 84 chr2 38499929 38500251 -214756332 + AluSx SINE Alu 1 295 -17 3681 114 20 2 chr2 38500513 38501011 -214755572 - MER84 LTR ERV1 0 507 1 908 215 0 23 chr2 38501769 38501941 -214754642 + MER5B DNA MER1_type 1 168 -10 4593 197 50 28 chr2 38501998 38502978 -214753605 - Charlie1a DNA MER1_type -1307 1454 446 1860 152 7 3 chr2 38502978 38503268 -214753315 - AluSx SINE Alu -17 295 5 4593 197 50 28 chr2 38503268 38503391 -214753192 - Charlie1a DNA MER1_type -2315 446 327 1964 133 111 11 chr2 38503463 38503487 -214753096 + L1PB4 LINE L1 5753 5773 -383 438 20 0 0 chr2 38503487 38503538 -214753045 + (CA)n Simple_repeat Simple_repeat 1 51 0 1964 133 111 11 chr2 38503538 38503874 -214752709 + L1PB4 LINE L1 5773 6149 -7 516 286 57 10 chr2 38503869 38504061 -214752522 + L1MEc LINE L1 111 311 -6085 * 948 144 16 199 chr2 38504135 38504259 -214752324 - Charlie1a DNA MER1_type -2449 312 167 2153 134 3 0 chr2 38504259 38504564 -214752019 + AluSq SINE Alu 1 306 -7 948 144 16 199 chr2 38504564 38504807 -214751776 - Charlie1a DNA MER1_type -2594 167 1 904 237 28 28 chr2 38505541 38505794 -214750789 + LTR16A LTR ERVL 196 448 -2 208 211 0 0 chr2 38506921 38506966 -214749617 + MIR SINE MIR 115 160 -48 2496 56 0 3 chr2 38508263 38508568 -214748015 + AluY SINE Alu 1 304 -7 310 42 42 0 chr2 38509854 38509902 -214746681 + (TA)n Simple_repeat Simple_repeat 1 50 0 320 141 56 14 chr2 38509903 38509974 -214746609 - L1MCa LINE L1 -4358 2068 1995 294 188 43 14 chr2 38509978 38510047 -214746536 - MIR SINE MIR -70 192 122 639 217 13 13 chr2 38510605 38510762 -214745821 - L1ME4a LINE L1 -4 6117 5961 234 0 0 0 chr2 38510773 38510799 -214745784 + (TG)n Simple_repeat Simple_repeat 2 27 0 205 311 33 16 chr2 38510977 38511038 -214745545 - MIR SINE MIR -177 85 24 364 279 19 62 chr2 38512627 38512788 -214743795 - L2 LINE L2 -1 3312 3159 * 372 310 71 10 chr2 38512786 38512983 -214743600 - L2 LINE L2 -237 3035 2827 433 338 29 20 chr2 38513288 38513492 -214743091 + MIR3 SINE MIR 3 208 0 548 260 123 53 chr2 38513512 38513739 -214742844 - MIR SINE MIR 0 262 20 21 0 0 0 chr2 38514179 38514200 -214742383 + AT_rich Low_complexity Low_complexity 1 21 0 2407 101 0 0 chr2 38514309 38514615 -214741968 + AluSp SINE Alu 1 306 -7 861 129 8 8 chr2 38514621 38514753 -214741830 + AluJb SINE Alu 165 296 -16 735 104 37 0 chr2 38514766 38514901 -214741682 - Charlie5 DNA MER1_type -59 2553 2414 1694 141 22 51 chr2 38515028 38515341 -214741242 - AluJo SINE Alu -8 304 1 593 208 104 47 chr2 38516104 38516316 -214740267 + MER112 DNA MER1_type 1 224 -36 2192 65 0 7 chr2 38516596 38516873 -214739710 - AluSc SINE Alu -34 275 1 441 318 57 11 chr2 38517063 38517267 -214739316 - MIR SINE MIR 0 262 50 22 0 0 0 chr2 38518469 38518491 -214738092 + AT_rich Low_complexity Low_complexity 1 22 0 340 250 8 31 chr2 38518945 38519073 -214737510 + CT-rich Low_complexity Low_complexity 1 125 0 2283 104 0 3 chr2 38519435 38519732 -214736851 + AluSc SINE Alu 1 296 -13 183 314 0 0 chr2 38520190 38520241 -214736342 - L2 LINE L2 -17 3255 3205 1577 168 0 87 chr2 38520842 38521189 -214735394 + AluJb SINE Alu 3 312 0 268 310 10 0 chr2 38521820 38521920 -214734663 + L1MC4a LINE L1 5829 5929 -1879 463 228 64 142 chr2 38524086 38524522 -214732061 + MLT1H LTR MaLR 50 567 0 1420 325 72 29 chr2 38525362 38526050 -214730533 + HAL1 LINE L1 155 896 -1611 2012 120 0 66 chr2 38526050 38526384 -214730199 + AluJo SINE Alu 1 312 0 1420 325 72 29 chr2 38526384 38526637 -214729946 + HAL1 LINE L1 896 1137 -1370 1429 265 46 24 chr2 38526708 38527165 -214729418 + HAL1 LINE L1 1464 1930 -577 3615 215 164 85 chr2 38527264 38527624 -214728959 - L2 LINE L2 -751 2563 2233 221 29 0 57 chr2 38527624 38527659 -214728924 + (TATAA)n Simple_repeat Simple_repeat 1 33 0 3615 215 164 85 chr2 38527659 38527670 -214728913 - L2 LINE L2 -1081 2233 2224 278 120 0 60 chr2 38527670 38527711 -214728872 + FLAM SINE Alu 81 120 -182 198 0 0 0 chr2 38527711 38527733 -214728850 + (TTA)n Simple_repeat Simple_repeat 2 23 0 3615 215 164 85 chr2 38527741 38527772 -214728811 - L2 LINE L2 -1090 2224 2197 275 51 51 17 chr2 38527772 38527831 -214728752 + (CA)n Simple_repeat Simple_repeat 2 62 0 3615 215 164 85 chr2 38527831 38528967 -214727616 - L2 LINE L2 -1117 2197 849 948 227 252 0 chr2 38529293 38529610 -214726973 - LTR16A LTR ERVL 0 450 54 1944 149 17 0 chr2 38530304 38530600 -214725983 + AluJo SINE Alu 6 306 -6 294 321 0 12 chr2 38531822 38531906 -214724677 - MIR3 SINE MIR -15 193 111 22 56 0 19 chr2 38532552 38532579 -214724004 + AT_rich Low_complexity Low_complexity 1 27 -26 1426 148 30 112 chr2 38532579 38532910 -214723673 + AluYb8 SINE Alu 1 304 -14 22 56 0 19 chr2 38532910 38532936 -214723647 + AT_rich Low_complexity Low_complexity 27 53 0 183 129 0 0 chr2 38533406 38533437 -214723146 + (CAGGC)n Simple_repeat Simple_repeat 2 32 0 240 35 0 0 chr2 38533521 38533550 -214723033 + (CAAAA)n Simple_repeat Simple_repeat 1 29 0 644 58 23 0 chr2 38534082 38534168 -214722415 + AluSg/x SINE Alu 219 306 -3 1187 144 44 0 chr2 38534406 38534587 -214721996 - MER5A DNA MER1_type 0 189 1 270 56 0 0 chr2 38535186 38535222 -214721361 + (TG)n Simple_repeat Simple_repeat 1 36 0 1704 163 3 48 chr2 38536235 38536548 -214720035 - AluJb SINE Alu -13 299 1 270 191 36 12 chr2 38537133 38537217 -214719366 + (TA)n Simple_repeat Simple_repeat 1 86 0 690 296 76 9 chr2 38537347 38537570 -214719013 - MIR SINE MIR -2 260 23 207 0 0 0 chr2 38539816 38539839 -214716744 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 330 26 0 0 chr2 38540675 38540714 -214715869 + (TG)n Simple_repeat Simple_repeat 1 39 0 284 240 190 0 chr2 38540749 38540849 -214715734 + MER20B DNA MER1_type 67 185 -598 808 299 51 16 chr2 38540930 38541398 -214715185 - MLT1K LTR MaLR 0 588 67 2282 120 0 3 chr2 38541504 38541813 -214714770 - AluSx SINE Alu -4 308 1 1912 170 3 0 chr2 38541977 38542277 -214714306 + AluJo SINE Alu 1 301 -11 738 167 68 0 chr2 38542988 38543120 -214713463 + MER30 DNA MER1_type 1 141 -89 986 157 0 41 chr2 38543137 38543309 -214713274 - AluSx SINE Alu -23 287 123 279 0 0 0 chr2 38543318 38543349 -214713234 + (TG)n Simple_repeat Simple_repeat 2 32 0 312 339 24 0 chr2 38543455 38543579 -214713004 + L1ME LINE L1 43 169 -5901 2905 64 111 7 chr2 38543727 38544133 -214712450 - LTR7 LTR ERV1 -2 448 1 2243 103 73 14 chr2 38544133 38544501 -214712082 - HERVH LTR ERV1 0 7713 7324 1193 124 89 0 chr2 38544501 38544703 -214711880 - HERVH LTR ERV1 -1894 5819 5600 3723 125 6 0 chr2 38544704 38545233 -214711350 - HERVH LTR ERV1 -2564 5149 4618 * 5847 90 4 2 chr2 38545231 38546043 -214710540 - HERVH LTR ERV1 -3761 3952 3140 * 14775 91 21 20 chr2 38546040 38548229 -214708354 - HERVH LTR ERV1 -4729 2984 793 380 77 31 31 chr2 38548249 38548314 -214708269 - LTR7 LTR ERV1 -40 410 346 1004 134 0 0 chr2 38548315 38548449 -214708134 - AluSx SINE Alu -179 134 1 674 134 0 0 chr2 38548449 38548546 -214708037 + MER30 DNA MER1_type 134 230 0 1677 278 175 22 chr2 38548957 38549528 -214707055 + L2 LINE L2 2013 2495 -818 2126 123 7 0 chr2 38549528 38549821 -214706762 + AluSx SINE Alu 1 295 -17 1677 278 175 22 chr2 38549821 38550197 -214706386 + L2 LINE L2 2495 3111 -202 574 237 26 46 chr2 38550748 38550900 -214705683 + L2 LINE L2 3160 3308 -5 680 307 68 51 chr2 38551066 38551307 -214705276 + L2 LINE L2 2596 2831 -482 2258 104 0 19 chr2 38551307 38551616 -214704967 - AluSx SINE Alu -9 303 1 680 307 68 51 chr2 38551616 38552072 -214704511 + L2 LINE L2 2831 3313 0 247 229 33 0 chr2 38552106 38552167 -214704416 + L2 LINE L2 3008 3070 -243 278 339 55 16 chr2 38552368 38552495 -214704088 - MIR SINE MIR -128 134 3 3020 275 67 27 chr2 38554239 38554603 -214701980 + L2 LINE L2 2041 2389 -924 2061 137 0 0 chr2 38554603 38554896 -214701687 - AluSx SINE Alu -19 293 1 3020 275 67 27 chr2 38554896 38555607 -214700976 + L2 LINE L2 2389 3161 -152 1703 152 61 0 chr2 38555607 38555724 -214700859 + AluJo SINE Alu 3 111 -201 249 0 73 0 chr2 38555724 38555765 -214700818 + (TAAAA)n Simple_repeat Simple_repeat 1 44 0 1703 152 61 0 chr2 38555765 38555911 -214700672 + AluJo SINE Alu 111 282 -30 3020 275 67 27 chr2 38555911 38555994 -214700589 + L2 LINE L2 3161 3239 -74 238 246 66 0 chr2 38556837 38556898 -214699685 - MER94 DNA DNA -61 73 9 293 307 10 10 chr2 38557276 38557377 -214699206 + MIR3 SINE MIR 96 196 -12 544 281 109 17 chr2 38557380 38557618 -214698965 + MIR SINE MIR 2 261 -1 334 308 0 19 chr2 38557693 38557800 -214698783 - MIR SINE MIR -98 164 60 709 265 26 19 chr2 38558418 38558686 -214697897 - L1ME4a LINE L1 -206 5915 5646 432 0 0 0 chr2 38559079 38559127 -214697456 + (CA)n Simple_repeat Simple_repeat 2 49 0 260 335 133 25 chr2 38559185 38559343 -214697240 - MIR SINE MIR -82 180 6 305 297 8 78 chr2 38559345 38559365 -214697218 + MER5A DNA MER1_type 56 76 -113 2048 128 7 10 chr2 38559365 38559670 -214696913 + AluJb SINE Alu 1 304 -8 305 297 8 78 chr2 38559670 38559777 -214696806 + MER5A DNA MER1_type 76 174 -15 639 286 41 25 chr2 38560058 38560303 -214696280 + MIR SINE MIR 2 250 -12 6034 199 31 45 chr2 38560391 38560653 -214695930 - L1MB8 LINE L1 -6 6172 5908 2636 48 3 0 chr2 38560653 38560963 -214695620 + AluY SINE Alu 1 311 0 6034 199 31 45 chr2 38560963 38561237 -214695346 - L1MB8 LINE L1 -270 5908 5632 2550 71 0 0 chr2 38561237 38561546 -214695037 - AluSc SINE Alu 0 309 1 6034 199 31 45 chr2 38561546 38563334 -214693249 - L1MB8 LINE L1 -546 5632 3876 1613 188 111 2 chr2 38563346 38563751 -214692832 - Charlie2a DNA MER1_type -919 1943 1495 1729 219 74 31 chr2 38564910 38565189 -214691394 + LTR37B LTR ERV1 1 308 -160 1973 118 0 7 chr2 38565189 38565468 -214691115 - AluSx SINE Alu -3 309 33 1729 219 74 31 chr2 38565468 38565635 -214690948 + LTR37B LTR ERV1 308 466 -2 488 289 133 14 chr2 38565637 38565931 -214690652 - L1MB8 LINE L1 -3343 2803 2475 403 329 0 17 chr2 38565927 38566164 -214690419 - L1MEc LINE L1 -3998 2312 2080 * 357 239 69 118 chr2 38566514 38566919 -214689664 - L1MEc LINE L1 -4755 1555 1171 1825 162 13 7 chr2 38566925 38567228 -214689355 - AluSx SINE Alu -5 307 3 490 255 176 20 chr2 38567275 38567428 -214689155 + MER5A DNA MER1_type 13 189 0 1279 297 68 65 chr2 38567429 38567763 -214688820 - L1MEc LINE L1 -5003 1116 784 1765 151 41 7 chr2 38567763 38568034 -214688549 - AluJb SINE Alu -22 290 11 1279 297 68 65 chr2 38568034 38568809 -214687774 - L1MEc LINE L1 -5335 784 4 270 273 91 10 chr2 38569281 38569380 -214687203 + MIR SINE MIR 3 109 -153 2388 80 0 0 chr2 38569701 38570002 -214686581 - AluSc SINE Alu -8 301 1 713 24 0 0 chr2 38570228 38570310 -214686273 - L1PA4 LINE L1 -3 6152 6071 273 221 250 0 chr2 38570594 38570730 -214685853 + Charlie7 DNA MER1_type 2443 2612 0 3929 147 57 9 chr2 38570769 38571403 -214685180 + L1PB3 LINE L1 5489 6152 -2 1856 197 83 12 chr2 38572056 38572488 -214684095 - MLT1C LTR MaLR 0 467 5 23 0 0 0 chr2 38573014 38573037 -214683546 + AT_rich Low_complexity Low_complexity 1 23 0 2128 123 7 0 chr2 38573653 38573955 -214682628 + AluSx SINE Alu 1 304 -8 744 173 15 0 chr2 38575506 38575639 -214680944 + L1PA16 LINE L1 6016 6150 -16 225 0 0 0 chr2 38575646 38575671 -214680912 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 499 285 41 0 chr2 38575927 38576099 -214680484 - L1ME4a LINE L1 -193 5928 5750 410 317 83 19 chr2 38576315 38576520 -214680063 - MIR SINE MIR -10 252 35 1969 157 13 0 chr2 38576819 38577118 -214679465 + AluSx SINE Alu 1 303 -9 616 282 16 55 chr2 38577634 38577889 -214678694 - MIR SINE MIR -3 259 15 185 222 44 78 chr2 38577910 38578000 -214678583 - MIR SINE MIR -110 152 66 2406 155 3 0 chr2 38578971 38579307 -214677276 + MER1B DNA MER1_type 1 337 0 201 196 0 0 chr2 38579361 38579407 -214677176 + T-rich Low_complexity Low_complexity 1 46 0 333 87 0 0 chr2 38579524 38579570 -214677013 - MADE1 DNA Mariner -34 46 1 1593 195 24 0 chr2 38581358 38581478 -214675105 + AluJo SINE Alu 1 117 -195 322 38 19 19 chr2 38581478 38581531 -214675052 + (TAAA)n Simple_repeat Simple_repeat 2 54 0 1593 195 24 0 chr2 38581531 38581697 -214674886 + AluJo SINE Alu 117 294 -18 1176 181 31 4 chr2 38581898 38582125 -214674458 + L1MC2 LINE L1 6112 6344 0 705 231 18 123 chr2 38582475 38582601 -214673982 - MIR SINE MIR -2 260 177 8083 29 0 0 chr2 38582601 38583877 -214672706 - L1PA4 LINE L1 0 6155 4882 705 231 18 123 chr2 38583877 38584027 -214672556 - MIR SINE MIR -85 177 13 258 333 49 0 chr2 38584436 38584517 -214672066 - L2 LINE L2 -19 3253 3169 1644 138 98 64 chr2 38584662 38584988 -214671595 + MER1B DNA MER1_type 1 337 0 1022 166 6 22 chr2 38585195 38585376 -214671207 + FRAM SINE Alu 1 169 -7 295 250 50 12 chr2 38585945 38586025 -214670558 - L2 LINE L2 -1 3312 3230 1664 152 91 14 chr2 38586036 38586415 -214670168 - LOR1b LTR ERV1 0 461 1 193 230 69 11 chr2 38586484 38586571 -214670012 - L2 LINE L2 -137 3176 3085 1207 248 95 24 chr2 38586595 38586974 -214669609 - L2 LINE L2 -343 2971 2566 4512 133 16 4 chr2 38586992 38587684 -214668899 - MER50 LTR ERV1 -34 700 1 1452 207 98 19 chr2 38587684 38587709 -214668874 - L2 LINE L2 -745 2569 2547 1980 95 50 21 chr2 38587709 38587992 -214668591 + AluSg SINE Alu 1 291 -19 1452 207 98 19 chr2 38587992 38588376 -214668207 - L2 LINE L2 -767 2547 2128 273 235 59 24 chr2 38588499 38588584 -214667999 - MIR3 SINE MIR -12 196 109 221 57 29 0 chr2 38588632 38588667 -214667916 + (TG)n Simple_repeat Simple_repeat 2 37 0 318 262 68 10 chr2 38589247 38589350 -214667233 - MIR SINE MIR -56 206 98 486 288 201 0 chr2 38589438 38589622 -214666961 + MIR SINE MIR 6 226 -36 2996 151 35 40 chr2 38589955 38590532 -214666051 + MER4B LTR ERV1 1 574 -36 1852 122 11 8 chr2 38590875 38591138 -214665445 - AluSx SINE Alu -17 295 32 648 265 150 26 chr2 38591178 38591412 -214665171 + LTR29 LTR ERV1 130 392 -252 601 219 39 5 chr2 38591410 38591622 -214664961 + MER39 LTR ERV1 572 707 0 * 14096 158 24 8 chr2 38591784 38592935 -214663648 - L1PB1 LINE L1 -1 6866 5735 2015 124 7 20 chr2 38592935 38593263 -214663320 - AluSq SINE Alu 0 313 1 14096 158 24 8 chr2 38593263 38597493 -214659090 - L1PB1 LINE L1 -1132 5735 1392 743 221 11 0 chr2 38597490 38597680 -214658903 - L1PB1 LINE L1 -6666 197 6 * 48 0 0 0 chr2 38598175 38598223 -214658360 + AT_rich Low_complexity Low_complexity 1 48 0 550 140 43 0 chr2 38598223 38598316 -214658267 - U6 snRNA snRNA -4 103 7 1347 179 3 103 chr2 38598503 38598815 -214657768 + AluSp SINE Alu 28 308 -5 462 243 78 24 chr2 38599394 38600559 -214656024 + L1ME1 LINE L1 2149 3465 -2681 1414 152 0 27 chr2 38600571 38600605 -214655978 + AluJb SINE Alu 81 114 -198 2044 139 38 6 chr2 38600605 38600949 -214655634 - THE1A LTR MaLR 0 355 1 1414 152 0 27 chr2 38600949 38601138 -214655445 + AluJb SINE Alu 114 298 -14 1656 217 76 31 chr2 38601138 38601821 -214654762 + L1ME1 LINE L1 4628 5341 -805 1930 221 62 22 chr2 38601838 38602416 -214654167 + L1ME1 LINE L1 5560 6160 -6 21 0 0 0 chr2 38602481 38602502 -214654081 + AT_rich Low_complexity Low_complexity 1 21 0 26 23 0 23 chr2 38602848 38602876 -214653707 + AT_rich Low_complexity Low_complexity 1 29 -14 4576 38 6 0 chr2 38602876 38603426 -214653157 - L1PA5 LINE L1 -1 6153 5601 26 23 0 23 chr2 38603426 38603441 -214653142 + AT_rich Low_complexity Low_complexity 29 43 0 354 80 0 0 chr2 38603477 38603527 -214653056 + (TG)n Simple_repeat Simple_repeat 1 50 0 28 48 0 0 chr2 38603707 38603749 -214652834 + AT_rich Low_complexity Low_complexity 1 42 0 678 258 69 127 chr2 38603801 38604158 -214652425 + MER21B LTR ERV1 23 324 -539 1896 183 3 0 chr2 38604158 38604464 -214652119 - AluSx SINE Alu -5 307 1 678 258 69 127 chr2 38604464 38604784 -214651799 + MER21B LTR ERV1 324 661 -202 242 242 33 0 chr2 38606577 38606668 -214649915 + HAL1 LINE L1 1005 1098 -1409 340 247 51 75 chr2 38606838 38607130 -214649453 + L1ME4a LINE L1 5618 5902 -219 383 345 34 20 chr2 38608194 38608342 -214648241 + MIR SINE MIR 2 151 -111 425 269 187 8 chr2 38608490 38608624 -214647959 + MIR3 SINE MIR 30 187 -21 5421 145 25 11 chr2 38608828 38609809 -214646774 - L1MA4 LINE L1 -11 6289 5296 21 57 0 0 chr2 38609964 38609999 -214646584 + GC_rich Low_complexity Low_complexity 1 35 0 24 103 0 0 chr2 38611025 38611112 -214645471 + AT_rich Low_complexity Low_complexity 1 87 0 247 266 64 58 chr2 38611142 38611315 -214645268 - L1ME4a LINE L1 -102 6019 5846 471 216 69 0 chr2 38611934 38612050 -214644533 + MER103 DNA DNA 2 125 -41 180 0 0 0 chr2 38612681 38612701 -214643882 + (A)n Simple_repeat Simple_repeat 1 20 0 1340 205 79 4 chr2 38613160 38613438 -214643145 - AluJo SINE Alu -1 301 3 322 300 23 31 chr2 38613442 38613572 -214643011 - MIR SINE MIR -73 189 61 2151 217 84 11 chr2 38613789 38614251 -214642332 - MER89 LTR ERV1 0 559 53 2062 102 3 3 chr2 38614251 38614535 -214642048 - AluSg1 SINE Alu -25 284 1 2151 217 84 11 chr2 38614535 38614593 -214641990 - MER89 LTR ERV1 -506 53 1 811 162 0 22 chr2 38614823 38614959 -214641624 - FLAM_A SINE Alu 0 133 1 1088 144 21 26 chr2 38615406 38615600 -214640983 + AluJo SINE Alu 109 301 -11 2089 104 0 57 chr2 38616108 38616425 -214640158 - AluSx SINE Alu -13 299 1 24 0 0 0 chr2 38616432 38616456 -214640127 + AT_rich Low_complexity Low_complexity 1 24 0 375 267 151 48 chr2 38616545 38616786 -214639797 + L1ME4a LINE L1 5592 5887 -234 1732 51 0 0 chr2 38616786 38617001 -214639582 - L1PA3 LINE L1 -1 6154 5940 375 267 151 48 chr2 38617001 38617137 -214639446 + L1ME4a LINE L1 5887 6008 -113 214 229 14 14 chr2 38617320 38617390 -214639193 + (TA)n Simple_repeat Simple_repeat 2 71 0 475 316 37 88 chr2 38617887 38618181 -214638402 - L2 LINE L2 -5 3267 2989 255 270 160 0 chr2 38618352 38618452 -214638131 - MIR SINE MIR -59 203 88 1154 258 21 45 chr2 38618455 38618835 -214637748 - MLT1A2 LTR MaLR 0 374 4 381 58 0 0 chr2 38618876 38618928 -214637655 + (TG)n Simple_repeat Simple_repeat 2 53 0 659 268 49 12 chr2 38619478 38619642 -214636941 - MER5B DNA MER1_type -2 176 7 258 277 15 0 chr2 38619922 38619987 -214636596 - L2 LINE L2 0 3313 3248 488 278 23 15 chr2 38620602 38620735 -214635848 + MIR SINE MIR 20 153 -109 487 235 93 37 chr2 38621084 38621116 -214635467 - MIR SINE MIR -43 219 190 1780 136 4 8 chr2 38621116 38621374 -214635209 - AluJb SINE Alu -23 289 33 487 235 93 37 chr2 38621374 38621503 -214635080 - MIR SINE MIR -72 190 49 453 50 0 0 chr2 38623209 38623269 -214633314 + (TG)n Simple_repeat Simple_repeat 1 60 0 652 239 111 114 chr2 38624143 38624461 -214632122 - MLT1G LTR MaLR -285 310 1 4342 225 81 20 chr2 38624624 38626865 -214629718 - L1ME2 LINE L1 -9 6224 3844 325 245 214 47 chr2 38626882 38627074 -214629509 - MLT1F LTR MaLR -130 412 189 221 203 34 0 chr2 38627087 38627146 -214629437 + GA-rich Low_complexity Low_complexity 2 62 0 2272 255 42 33 chr2 38627146 38629119 -214627464 - L1ME2 LINE L1 -2968 3247 1298 1476 281 83 56 chr2 38629122 38629984 -214626599 - L1ME2 LINE L1 -5253 1143 245 2091 151 0 0 chr2 38629984 38630275 -214626308 - AluSx SINE Alu -21 291 1 1476 281 83 56 chr2 38630275 38630472 -214626111 - L1ME2 LINE L1 -6151 245 55 274 171 29 0 chr2 38631305 38631375 -214625208 + (TCTA)n Simple_repeat Simple_repeat 1 72 0 319 286 86 29 chr2 38631455 38631595 -214624988 + MIR SINE MIR 115 262 0 248 70 23 0 chr2 38631755 38631798 -214624785 + (CCCTG)n Simple_repeat Simple_repeat 2 45 0 3100 83 4 20 chr2 38632126 38632583 -214624000 + L1PB1 LINE L1 5701 6150 -1 418 245 46 46 chr2 38632709 38632860 -214623723 + LTR50 LTR ERVL 17 167 -628 688 301 85 22 chr2 38632921 38633240 -214623343 + LTR50 LTR ERVL 344 682 -113 1356 161 8 39 chr2 38633264 38633519 -214623064 + Tigger7 DNA MER2_type 1 247 -486 548 174 10 0 chr2 38633527 38633625 -214622958 + Tigger7 DNA MER2_type 2389 2487 0 941 103 0 7 chr2 38633665 38633810 -214622773 + (TTCCC)n Simple_repeat Simple_repeat 3 146 0 477 300 51 27 chr2 38634672 38634965 -214621618 + ERVL LTR ERVL 972 1271 -4493 356 243 19 35 chr2 38634991 38635148 -214621435 + MER58 DNA MER1_type 60 2420 0 364 237 67 59 chr2 38636494 38636629 -214619954 + L3 LINE CR1 767 902 -675 243 352 29 0 chr2 38637219 38637324 -214619259 - MIR SINE MIR -60 148 41 410 231 0 9 chr2 38638764 38638872 -214617711 - MER103 DNA DNA -58 108 2 206 358 100 42 chr2 38641378 38641568 -214615015 + L2 LINE L2 2558 2758 -556 1598 180 29 0 chr2 38641658 38641967 -214614616 - AluSx SINE Alu 0 317 1 453 281 122 13 chr2 38642067 38642253 -214614330 + L1ME4a LINE L1 5649 5868 -253 6810 124 58 17 chr2 38642253 38642840 -214613743 - Tigger3b DNA MER2_type -1797 1231 669 1802 157 3 38 chr2 38642840 38643158 -214613425 - AluJo SINE Alu -5 307 1 6810 124 58 17 chr2 38643158 38643752 -214612831 - Tigger3b DNA MER2_type -2359 669 2 453 281 122 13 chr2 38643752 38643803 -214612780 + L1ME4a LINE L1 5868 5912 -209 7448 181 28 22 chr2 38643806 38645360 -214611223 + MER52A LTR ERV1 245 1755 0 295 215 8 85 chr2 38645419 38645549 -214611034 + L1ME4a LINE L1 5999 6118 -3 234 213 39 118 chr2 38645582 38645709 -214610874 - L1ME4a LINE L1 -5 6116 6000 294 270 70 104 chr2 38645721 38646076 -214610507 - MLT1I LTR MaLR -26 383 41 1760 154 17 10 chr2 38646204 38646496 -214610087 - AluJb SINE Alu -18 294 1 661 234 77 55 chr2 38646592 38646785 -214609798 - L1ME4a LINE L1 -313 5808 5606 1662 150 54 18 chr2 38646785 38647065 -214609518 - AluJb SINE Alu -22 290 1 661 234 77 55 chr2 38647065 38647144 -214609439 - L1ME4a LINE L1 -515 5606 5530 187 244 141 26 chr2 38647272 38647350 -214609233 + L2 LINE L2 3166 3252 -61 505 136 7 57 chr2 38647877 38648017 -214608566 + (TTCTCC)n Simple_repeat Simple_repeat 3 135 0 404 289 17 33 chr2 38648025 38648205 -214608378 + Charlie8 DNA MER1_type 97 273 -2144 468 250 54 0 chr2 38648592 38648704 -214607879 - L2 LINE L2 -8 3305 3188 2984 246 142 35 chr2 38648718 38649826 -214606757 + L2 LINE L2 1936 3170 -143 1455 227 7 3 chr2 38649826 38650121 -214606462 - AluJo SINE Alu -16 296 1 2984 246 142 35 chr2 38650121 38650221 -214606362 + L2 LINE L2 3170 3258 -55 198 103 0 0 chr2 38650245 38650274 -214606309 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 2189 70 42 7 chr2 38650611 38650897 -214605686 + AluSc SINE Alu 1 296 -13 253 332 63 22 chr2 38652444 38652627 -214603956 + MIR SINE MIR 20 212 -50 1357 122 5 0 chr2 38652851 38653048 -214603535 - AluSq SINE Alu -1 312 115 1029 88 22 7 chr2 38653105 38653242 -214603341 - AluSq SINE Alu -174 139 1 332 309 80 11 chr2 38653283 38653529 -214603054 - L1ME3A LINE L1 -214 5939 5669 270 291 187 3 chr2 38653530 38653846 -214602737 - L1ME3A LINE L1 -2171 5620 5247 301 293 107 94 chr2 38653861 38654254 -214602329 - L1ME3A LINE L1 -884 5245 4848 21 0 0 0 chr2 38654265 38654286 -214602297 + AT_rich Low_complexity Low_complexity 1 21 0 8476 184 27 20 chr2 38654384 38656474 -214600109 - L1PA13 LINE L1 -11 6152 4045 7941 11 0 0 chr2 38656474 38657771 -214598812 - L1PA2 LINE L1 0 6155 4859 8476 184 27 20 chr2 38657771 38658717 -214597866 - L1PA13 LINE L1 -2118 4045 3107 4383 111 23 6 chr2 38658747 38659447 -214597136 - L1MA2 LINE L1 -100 6204 5493 2052 264 7 5 chr2 38659432 38660042 -214596541 - L1ME3A LINE L1 -3027 3102 2492 * 300 283 91 36 chr2 38660107 38660516 -214596067 - L1M4 LINE L1 -2582 3564 3096 689 193 7 22 chr2 38660516 38660651 -214595932 - FLAM_A SINE Alu 0 133 1 300 283 91 36 chr2 38660651 38660966 -214595617 - L1M4 LINE L1 -3050 3096 2800 414 311 79 16 chr2 38661099 38661289 -214595294 - L1ME3A LINE L1 -5415 704 503 413 350 154 29 chr2 38661399 38661679 -214594904 - L1ME3A LINE L1 -5758 361 47 483 225 247 17 chr2 38663252 38663430 -214593153 + MIR SINE MIR 43 261 -1 1638 129 102 88 chr2 38665969 38666090 -214590493 + MLT2C2 LTR ERVL 1 119 -345 2077 127 0 35 chr2 38666090 38666406 -214590177 + AluSg SINE Alu 1 305 -5 1638 129 102 88 chr2 38666406 38666694 -214589889 + MLT2C2 LTR ERVL 119 416 -48 290 133 0 50 chr2 38666759 38666819 -214589764 + MLT2C2 LTR ERVL 464 520 0 229 284 32 51 chr2 38666867 38666969 -214589614 - L2 LINE L2 -332 2940 2848 331 284 0 10 chr2 38667662 38667764 -214588819 + LTR67 LTR ERVL 437 537 -20 1327 236 24 0 chr2 38718516 38718889 -214537694 + L1ME1 LINE L1 3544 3925 -2221 1280 106 0 0 chr2 38718889 38719050 -214537533 - AluSx SINE Alu -151 161 1 259 247 25 0 chr2 38719051 38719132 -214537451 - L1MD2 LINE L1 -145 6214 6132 * 2781 202 61 38 chr2 38719115 38719546 -214537037 + L1ME1 LINE L1 4441 4861 -1305 2481 60 3 7 chr2 38719546 38719848 -214536735 + AluY SINE Alu 1 301 -10 2781 202 61 38 chr2 38719848 38720901 -214535682 + L1ME1 LINE L1 4861 5962 -204 22 35 0 0 chr2 38720901 38720930 -214535653 + AT_rich Low_complexity Low_complexity 1 29 0 249 190 350 30 chr2 38721687 38721787 -214534796 + L2 LINE L2 3182 3313 0 1120 216 41 25 chr2 38721819 38722138 -214534445 + MLT1C LTR MaLR 144 467 0 2149 109 3 17 chr2 38722812 38723114 -214533469 - AluSx SINE Alu -14 298 1 261 276 23 46 chr2 38723528 38723615 -214532968 + MIR SINE MIR 3 87 -175 200 378 0 31 chr2 38723721 38723819 -214532764 - MIR SINE MIR -148 114 20 349 323 126 19 chr2 38724241 38724504 -214532079 + L2 LINE L2 2109 2399 -915 2063 284 163 14 chr2 38725475 38726400 -214530183 - L2 LINE L2 -234 3079 2004 305 310 92 14 chr2 38726554 38726696 -214529887 - L2 LINE L2 -1341 1973 1821 608 188 60 0 chr2 38726733 38726866 -214529717 - L1PA10 LINE L1 -1 6167 6027 1219 261 160 32 chr2 38726996 38727563 -214529020 + HAL1 LINE L1 220 876 -1631 2219 105 0 31 chr2 38727563 38727886 -214528697 - AluSq SINE Alu 0 313 1 1219 261 160 32 chr2 38727886 38727942 -214528641 + HAL1 LINE L1 876 923 -1584 2814 96 76 5 chr2 38727953 38728399 -214528184 + MER9 LTR ERVK 34 511 0 581 275 18 42 chr2 38728486 38728653 -214527930 - L2 LINE L2 -2047 1267 1105 781 207 130 49 chr2 38730307 38730592 -214525991 + L2 LINE L2 2305 2612 -702 220 321 107 9 chr2 38730775 38730887 -214525696 + MIR SINE MIR 81 203 -59 1928 230 49 28 chr2 38731199 38731728 -214524855 - MLT1F LTR MaLR -2 593 1 2204 122 0 13 chr2 38732019 38732323 -214524260 + AluSx SINE Alu 1 300 -12 243 267 35 0 chr2 38732361 38732447 -214524136 - MLT1K LTR MaLR 0 588 500 303 276 41 16 chr2 38732505 38732628 -214523955 - MLT1K LTR MaLR -186 402 277 407 267 230 7 chr2 38732884 38733019 -214523564 + MER5A DNA MER1_type 24 188 -1 356 312 206 41 chr2 38733381 38733817 -214522766 - L2 LINE L2 -568 2746 2239 1791 155 0 21 chr2 38734012 38734328 -214522255 - AluJo SINE Alu 0 310 1 2373 105 0 0 chr2 38734791 38735104 -214521479 + AluSq SINE Alu 1 313 0 1283 160 0 63 chr2 38736506 38736549 -214520034 + AluJo SINE Alu 37 81 -231 2428 87 3 0 chr2 38736549 38736849 -214519734 + AluSp SINE Alu 1 301 -12 1283 160 0 63 chr2 38736849 38737042 -214519541 + AluJo SINE Alu 81 258 -54 23 0 0 0 chr2 38737046 38737069 -214519514 + AT_rich Low_complexity Low_complexity 1 23 0 607 106 34 28 chr2 38737831 38738010 -214518573 + (TA)n Simple_repeat Simple_repeat 1 180 0 1873 178 0 0 chr2 38738370 38738662 -214517921 + AluJo SINE Alu 1 292 -20 869 160 0 0 chr2 38738719 38738850 -214517733 + FLAM_C SINE Alu 1 131 -12 2288 101 0 0 chr2 38739173 38739461 -214517122 - AluSc SINE Alu -21 288 1 233 216 0 0 chr2 38739630 38739681 -214516902 + GA-rich Low_complexity Low_complexity 1 51 0 1060 204 38 5 chr2 38739727 38739938 -214516645 - MER20 DNA MER1_type -1 218 1 1948 148 13 10 chr2 38740166 38740470 -214516113 + AluSx SINE Alu 1 305 -7 593 313 70 14 chr2 38742608 38742822 -214513761 - L3 LINE CR1 -11 1566 1341 230 246 15 31 chr2 38742829 38742894 -214513689 - L3 LINE CR1 -941 636 573 445 219 163 0 chr2 38743275 38743398 -214513185 - MER5B DNA MER1_type -34 144 2 27 49 0 0 chr2 38743506 38743547 -214513036 + AT_rich Low_complexity Low_complexity 1 41 0 2182 130 0 0 chr2 38743547 38743840 -214512743 + AluSx SINE Alu 1 293 -19 282 56 0 0 chr2 38743841 38743877 -214512706 + (TA)n Simple_repeat Simple_repeat 1 36 0 198 0 0 0 chr2 38743876 38743898 -214512685 + (GA)n Simple_repeat Simple_repeat 2 23 0 * 721 179 15 22 chr2 38744272 38744406 -214512177 + FLAM_A SINE Alu 1 133 0 2585 140 110 10 chr2 38745129 38745649 -214510934 + L1MB8 LINE L1 5607 6178 0 757 175 25 25 chr2 38745779 38745939 -214510644 + MLT1D LTR MaLR 346 505 0 258 319 26 9 chr2 38746473 38746589 -214509994 + L2 LINE L2 2412 2529 -785 471 217 212 29 chr2 38746701 38746954 -214509629 + L1MC4 LINE L1 6959 7256 -728 * 472 243 163 80 chr2 38746947 38747487 -214509096 + L1MC5 LINE L1 7260 7783 -178 1712 177 0 7 chr2 38747487 38747758 -214508825 + AluJo SINE Alu 24 292 -20 472 243 163 80 chr2 38747758 38747894 -214508689 + L1MC5 LINE L1 7783 7906 -55 233 268 14 14 chr2 38748083 38748146 -214508437 + (CATA)n Simple_repeat Simple_repeat 2 64 -75 516 212 326 0 chr2 38748146 38748278 -214508305 + MER45A DNA AcHobo 1 175 -3 233 268 14 14 chr2 38748278 38748350 -214508233 + (CATA)n Simple_repeat Simple_repeat 63 139 0 198 0 0 0 chr2 38748510 38748532 -214508051 + (TG)n Simple_repeat Simple_repeat 1 22 0 2473 85 0 0 chr2 38748697 38749002 -214507581 - AluSq SINE Alu -8 305 1 1552 259 107 63 chr2 38749146 38749363 -214507220 - L1MC4 LINE L1 -12 8030 7824 2021 135 0 3 chr2 38749363 38749688 -214506895 + AluSx SINE Alu 1 324 0 1552 259 107 63 chr2 38749688 38749821 -214506762 - L1MC4 LINE L1 -218 7824 7698 1634 209 0 3 chr2 38749821 38750127 -214506456 - AluJo SINE Alu -7 305 1 1552 259 107 63 chr2 38750127 38750571 -214506012 - L1MC4 LINE L1 -344 7698 7199 2872 114 25 39 chr2 38750720 38751158 -214505425 + MSTB1 LTR MaLR 1 432 0 950 252 122 28 chr2 38751709 38752070 -214504513 - L1ME3 LINE L1 -211 5951 5557 2237 120 7 0 chr2 38752268 38752569 -214504014 + AluSx SINE Alu 1 303 -9 2258 120 0 0 chr2 38753370 38753670 -214502913 + AluSq SINE Alu 1 300 -13 402 270 15 58 chr2 38754031 38754082 -214502501 + L2 LINE L2 3177 3229 -84 2197 113 7 0 chr2 38754082 38754374 -214502209 - AluSx SINE Alu -18 294 1 402 270 15 58 chr2 38754374 38754459 -214502124 + L2 LINE L2 3229 3307 -6 360 284 121 37 chr2 38754922 38755112 -214501471 + MIR SINE MIR 23 228 -34 1841 191 61 27 chr2 38755130 38755574 -214501009 + L1ME2 LINE L1 5696 6154 -10 1840 111 9 79 chr2 38755586 38755902 -214500681 - AluSx SINE Alu -18 294 1 3034 125 42 10 chr2 38756343 38756838 -214499745 + L1MB3 LINE L1 5671 6181 -2 798 124 0 0 chr2 38756896 38757009 -214499574 - AluSp/q SINE Alu -3 310 198 1924 130 7 33 chr2 38757078 38757385 -214499198 + AluJb SINE Alu 1 299 -13 306 0 0 0 chr2 38757385 38757419 -214499164 + (TA)n Simple_repeat Simple_repeat 2 35 0 764 294 56 36 chr2 38757540 38757877 -214498706 + MLT1I LTR MaLR 63 406 -3 626 296 87 47 chr2 38757878 38758249 -214498334 + L1MC4a LINE L1 4489 4891 -1255 1415 130 39 0 chr2 38758249 38758479 -214498104 - L1MB4 LINE L1 -2 6178 5940 626 296 87 47 chr2 38758479 38758630 -214497953 + L1MC4a LINE L1 4891 5034 -1112 2344 101 3 10 chr2 38758721 38759028 -214497555 + AluSq SINE Alu 2 306 -7 346 308 162 20 chr2 38759117 38759364 -214497219 + L1MC4a LINE L1 5262 5543 -2265 1159 153 0 110 chr2 38759581 38759835 -214496748 + AluJo SINE Alu 86 311 -1 480 295 96 48 chr2 38759856 38760127 -214496456 + L1MC4a LINE L1 5770 6053 -1755 2325 75 0 47 chr2 38760548 38760866 -214495717 - AluY SINE Alu -6 305 3 610 285 167 11 chr2 38760911 38761192 -214495391 + L3 LINE CR1 1242 1566 -11 2063 128 0 36 chr2 38761378 38761705 -214494878 - AluSx SINE Alu 0 312 1 946 167 39 0 chr2 38761729 38761885 -214494698 - AluJb SINE Alu -15 297 136 1953 144 3 3 chr2 38762436 38762748 -214493835 + AluSx SINE Alu 1 312 0 1757 177 13 0 chr2 38762762 38763061 -214493522 + AluJb SINE Alu 1 303 -9 1886 142 3 29 chr2 38763532 38763842 -214492741 + AluJb SINE Alu 1 302 -10 31 74 0 21 chr2 38765063 38765107 -214491476 + AT_rich Low_complexity Low_complexity 1 44 -49 2284 96 7 0 chr2 38765107 38765398 -214491185 - AluSx SINE Alu -19 293 1 31 74 0 21 chr2 38765398 38765448 -214491135 + AT_rich Low_complexity Low_complexity 44 93 0 35 24 0 0 chr2 38765680 38765722 -214490861 + AT_rich Low_complexity Low_complexity 1 42 0 2217 34 45 8 chr2 38765774 38766042 -214490541 + AluY SINE Alu 33 310 -1 2036 147 0 3 chr2 38766187 38766486 -214490097 + AluSx SINE Alu 1 298 -14 2587 56 0 0 chr2 38766488 38766792 -214489791 + AluY SINE Alu 1 304 -7 180 0 0 0 chr2 38767124 38767144 -214489439 + (T)n Simple_repeat Simple_repeat 1 20 0 190 282 107 10 chr2 38767857 38767960 -214488623 + MIR SINE MIR 124 236 -26 2343 90 0 7 chr2 38768392 38768693 -214487890 + AluSg SINE Alu 1 299 -11 1766 185 0 3 chr2 38768776 38769074 -214487509 - AluJb SINE Alu -15 297 1 1986 141 7 0 chr2 38769477 38769774 -214486809 - AluJb SINE Alu -13 299 1 2241 87 7 3 chr2 38769779 38770065 -214486518 - AluSc SINE Alu -22 287 1 338 265 20 48 chr2 38770072 38770219 -214486364 - L1ME LINE L1 -299 5822 5680 1629 158 4 4 chr2 38770235 38770494 -214486089 - AluJb SINE Alu -13 299 41 2325 100 6 0 chr2 38770506 38770817 -214485766 - AluSp SINE Alu 0 313 1 917 257 113 70 chr2 38770857 38771344 -214485239 + MLT1H1 LTR MaLR 45 552 -3 444 200 0 22 chr2 38771366 38771456 -214485127 + MIR3 SINE MIR 89 176 -32 2406 106 0 0 chr2 38772183 38772494 -214484089 + AluSq SINE Alu 3 313 0 768 313 90 36 chr2 38772634 38773248 -214483335 + L2 LINE L2 2463 3130 -142 2291 110 3 0 chr2 38773248 38773548 -214483035 - AluSx SINE Alu -11 301 1 768 313 90 36 chr2 38773548 38773685 -214482898 + L2 LINE L2 3130 3258 -14 425 141 16 0 chr2 38774174 38774238 -214482345 + LTR19A LTR ERV1 1 65 -421 46821 79 9 8 chr2 38774239 38775601 -214480982 + HERVFH19I LTR ERV1 1493 2852 -4867 2036 122 3 7 chr2 38775601 38775908 -214480675 - AluSx SINE Alu 0 306 1 46821 79 9 8 chr2 38775908 38777817 -214478766 + HERVFH19I LTR ERV1 2852 4758 -2961 2314 94 7 0 chr2 38777817 38778116 -214478467 + AluSg SINE Alu 1 301 -9 46821 79 9 8 chr2 38778116 38780961 -214475622 + HERVFH19I LTR ERV1 4758 7616 -103 1805 171 0 13 chr2 38781129 38781439 -214475144 - AluJo SINE Alu -6 306 1 528 236 93 28 chr2 38782668 38782884 -214473699 - L1ME LINE L1 -668 5498 5269 756 163 7 15 chr2 38782975 38783110 -214473473 - FLAM_C SINE Alu -4 139 6 2260 88 7 0 chr2 38783337 38783634 -214472949 + AluSg SINE Alu 1 299 -11 23 0 0 0 chr2 38784252 38784275 -214472308 + AT_rich Low_complexity Low_complexity 1 23 0 1669 166 0 53 chr2 38784299 38784541 -214472042 - AluJb SINE Alu -9 303 81 2274 100 3 3 chr2 38784541 38784840 -214471743 + AluSg SINE Alu 1 299 -11 1669 166 0 53 chr2 38784840 38784917 -214471666 - AluJb SINE Alu -231 81 1 271 228 49 54 chr2 38787621 38787639 -214468944 - L1ME LINE L1 -2893 3253 3236 1863 160 0 13 chr2 38787639 38787939 -214468644 - AluJb SINE Alu -16 296 1 271 228 49 54 chr2 38787939 38788104 -214468479 - L1ME LINE L1 -2910 3236 3071 368 316 47 60 chr2 38788287 38788453 -214468130 - HAL1b LINE L1 -875 473 306 2224 94 20 7 chr2 38788453 38788750 -214467833 + AluSg SINE Alu 1 301 -9 368 316 47 60 chr2 38788750 38788947 -214467636 - HAL1b LINE L1 -1042 306 115 1297 128 13 49 chr2 38788949 38789108 -214467475 - MER2 DNA MER2_type 0 345 195 1935 167 0 3 chr2 38789108 38789420 -214467163 + AluJb SINE Alu 1 311 -1 1297 128 13 49 chr2 38789420 38789485 -214467098 - MER2 DNA MER2_type -150 195 129 4677 120 12 140 chr2 38789485 38790083 -214466500 + Tigger3(Golem) DNA MER2_type 2 675 -2354 1941 157 10 3 chr2 38790083 38790388 -214466195 - AluJb SINE Alu -5 307 1 216 0 0 0 chr2 38790388 38790412 -214466171 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 485 114 114 0 chr2 38790412 38790482 -214466101 - AluJb SINE Alu -31 281 204 4677 120 12 140 chr2 38790482 38790648 -214465935 + Tigger3(Golem) DNA MER2_type 673 859 -2170 2371 106 0 0 chr2 38790648 38790949 -214465634 - AluSx SINE Alu -11 301 1 4677 120 12 140 chr2 38790949 38791258 -214465325 + Tigger3(Golem) DNA MER2_type 859 1206 -1823 2288 89 40 3 chr2 38791258 38791560 -214465023 - AluSq SINE Alu 0 313 1 4677 120 12 140 chr2 38791560 38791844 -214464739 + Tigger3(Golem) DNA MER2_type 1206 3029 0 851 174 0 0 chr2 38791844 38791975 -214464608 - MER2 DNA MER2_type -214 131 1 3082 23 12 3 chr2 38792825 38793169 -214463414 - L1PA4 LINE L1 -3 6152 5806 723 97 117 0 chr2 38793555 38793658 -214462925 + AluSq/x SINE Alu 2 116 -197 4746 165 84 60 chr2 38795043 38796100 -214460483 + Tigger6a DNA MER2_type 2 1083 0 3402 155 28 48 chr2 38796473 38797303 -214459280 + L1MB5 LINE L1 5009 5821 -353 2138 54 43 4 chr2 38797303 38797579 -214459004 + AluY SINE Alu 1 287 -24 3402 155 28 48 chr2 38797579 38797726 -214458857 + L1MB5 LINE L1 5821 5969 -205 698 314 147 33 chr2 38797756 38797788 -214458795 + L2 LINE L2 2034 2061 -1253 1820 141 30 27 chr2 38797788 38798087 -214458496 - AluSx SINE Alu -12 300 1 698 314 147 33 chr2 38798087 38798624 -214457959 + L2 LINE L2 2061 2668 -646 879 194 56 18 chr2 38798625 38798844 -214457739 - L1MB4 LINE L1 -6 6174 5973 1294 90 28 6 chr2 38798844 38799022 -214457561 - AluJo SINE Alu -9 303 122 2943 141 28 10 chr2 38799022 38799520 -214457063 - L1MB4 LINE L1 -209 5971 5465 2536 64 6 0 chr2 38799551 38799862 -214456721 + AluSp SINE Alu 1 313 0 927 240 26 131 chr2 38799867 38800072 -214456511 + L2 LINE L2 1835 2060 -1212 2311 88 0 3 chr2 38800072 38800366 -214456217 - AluSq SINE Alu -18 295 3 927 240 26 131 chr2 38800366 38800752 -214455831 + L2 LINE L2 2060 3024 -248 1618 120 0 0 chr2 38801250 38801475 -214455108 + AluSc SINE Alu 84 308 -1 618 309 17 7 chr2 38801479 38801770 -214454813 - L2 LINE L2 -164 3149 2856 261 0 0 0 chr2 38802417 38802446 -214454137 + (CCG)n Simple_repeat Simple_repeat 1 29 0 280 218 138 23 chr2 38802826 38802913 -214453670 - MIR SINE MIR -110 152 56 2230 103 3 7 chr2 38803417 38803718 -214452865 + AluSx SINE Alu 1 300 -12 2066 136 0 0 chr2 38804366 38804652 -214451931 - AluSx SINE Alu -26 286 1 330 293 93 20 chr2 38804654 38804804 -214451779 + MERVL LTR ERVL 513 673 -5091 253 333 70 19 chr2 38804857 38805013 -214451570 + MERVL LTR ERVL 827 990 -4774 2294 82 34 0 chr2 38805075 38805367 -214451216 + AluSc SINE Alu 1 302 -7 432 304 113 0 chr2 38805710 38805914 -214450669 + MERVL LTR ERVL 3947 4173 -1312 647 185 35 15 chr2 38806276 38806443 -214450140 + MLT1A1 LTR MaLR 2 210 -155 2075 121 7 0 chr2 38806443 38806830 -214449753 + AluSx SINE Alu 1 389 0 647 185 35 15 chr2 38806830 38806885 -214449698 + MLT1A1 LTR MaLR 210 262 -103 963 292 58 30 chr2 38806885 38807313 -214449270 + L2 LINE L2 2825 3264 -49 1017 240 0 5 chr2 38807317 38807517 -214449066 + MER58A DNA MER1_type 26 224 0 434 211 84 28 chr2 38807533 38807675 -214448908 - L2 LINE L2 -1204 2110 1961 738 171 17 86 chr2 38807885 38807934 -214448649 - L1MB5 LINE L1 0 6174 6123 2494 76 0 3 chr2 38807934 38808237 -214448346 - AluSq SINE Alu -11 302 1 738 171 17 86 chr2 38808237 38808362 -214448221 - L1MB5 LINE L1 -51 6123 6012 33 56 0 0 chr2 38808412 38808466 -214448117 + AT_rich Low_complexity Low_complexity 1 54 0 387 297 118 9 chr2 38808481 38808710 -214447873 - L1MB5 LINE L1 -345 5817 5564 4018 264 54 55 chr2 38808710 38808859 -214447724 - L1MEc LINE L1 -4418 1978 1830 2015 121 3 34 chr2 38808859 38809156 -214447427 - AluSq SINE Alu -25 288 1 4018 264 54 55 chr2 38809156 38809344 -214447239 - L1MEc LINE L1 -4566 1830 1643 2385 75 0 14 chr2 38809344 38809638 -214446945 - AluY SINE Alu -21 290 1 4018 264 54 55 chr2 38809638 38809814 -214446769 - L1MEc LINE L1 -4753 1643 1468 2872 16 0 0 chr2 38809814 38810125 -214446458 - AluYa5 SINE Alu 0 311 1 4018 264 54 55 chr2 38810125 38811450 -214445133 - L1MEc LINE L1 -4928 1468 140 356 244 12 110 chr2 38811464 38811538 -214445045 - L1MB5 LINE L1 -753 5393 5342 1671 168 14 31 chr2 38811538 38811830 -214444753 - AluJo SINE Alu -22 290 4 356 244 12 110 chr2 38811830 38811919 -214444664 - L1MB5 LINE L1 -804 5342 5246 756 193 6 11 chr2 38811927 38812108 -214444475 + CT-rich Low_complexity Low_complexity 1 180 0 2126 124 10 0 chr2 38812108 38812398 -214444185 - AluSx SINE Alu -19 293 1 2322 110 0 3 chr2 38812481 38812791 -214443792 + AluSx SINE Alu 1 309 -3 234 176 72 24 chr2 38813280 38813405 -214443178 + (TTA)n Simple_repeat Simple_repeat 1 131 0 1715 82 137 4 chr2 38813707 38813962 -214442621 - AluSx SINE Alu -23 289 1 231 320 48 0 chr2 38814374 38814477 -214442106 + L1ME4a LINE L1 5799 5906 -215 261 285 89 0 chr2 38814501 38814624 -214441959 + L1ME4a LINE L1 5961 6094 -27 274 345 109 0 chr2 38814837 38814947 -214441636 + MIR SINE MIR 20 141 -121 2256 105 0 19 chr2 38814985 38815299 -214441284 - AluSg1 SINE Alu -1 308 1 298 252 155 32 chr2 38815530 38815685 -214440898 + MLT1J LTR MaLR 3 176 -335 2241 107 0 3 chr2 38815690 38815981 -214440602 + AluSx SINE Alu 1 290 -22 1435 107 243 8 chr2 38816021 38816264 -214440319 + AluSg SINE Alu 1 300 0 2347 78 0 13 chr2 38816463 38816770 -214439813 + AluSc SINE Alu 1 303 -6 319 241 51 58 chr2 38816775 38816912 -214439671 + MLT1J LTR MaLR 374 509 -2 1383 151 5 14 chr2 38817557 38817776 -214438807 - AluJb SINE Alu -15 297 81 357 235 0 12 chr2 38817776 38817857 -214438726 + MER103 DNA DNA 77 156 -10 2359 92 0 0 chr2 38818020 38818314 -214438269 - AluSq SINE Alu -19 294 1 2248 105 0 0 chr2 38818325 38818659 -214437924 - AluSx SINE Alu 0 334 1 2216 246 109 20 chr2 38818728 38819731 -214436852 + L2 LINE L2 1975 3062 -251 1180 205 142 8 chr2 38819731 38819999 -214436584 - AluY SINE Alu -2 309 6 263 289 52 60 chr2 38820054 38820286 -214436297 + L2 LINE L2 3083 3312 -1 1262 197 99 0 chr2 38821106 38821461 -214435122 - MER3 DNA MER1_type 0 2624 2235 486 194 0 86 chr2 38821463 38821602 -214434981 - MER3 DNA MER1_type -42 167 41 531 231 186 0 chr2 38821609 38821765 -214434818 + MIR SINE MIR 62 246 -16 2348 97 10 0 chr2 38821767 38822066 -214434517 - AluSx SINE Alu -10 302 1 238 220 0 0 chr2 38822075 38822125 -214434458 + (TTA)n Simple_repeat Simple_repeat 3 52 0 282 224 42 106 chr2 38822170 38822374 -214434209 + MLT1L LTR MaLR 1 267 -348 366 145 87 0 chr2 38822664 38822733 -214433850 + L1MA9 LINE L1 5833 5907 -384 1220 169 61 0 chr2 38822735 38822948 -214433635 + AluJb SINE Alu 87 312 0 1356 188 33 66 chr2 38822954 38823347 -214433236 + L1MA9 LINE L1 5894 6273 -39 1177 118 6 12 chr2 38823557 38823726 -214432857 - AluSp SINE Alu -21 292 125 186 118 0 0 chr2 38823726 38823760 -214432823 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 1912 147 7 0 chr2 38823760 38824039 -214432544 - AluSx SINE Alu -28 284 4 266 303 33 16 chr2 38824056 38824178 -214432405 + MIR SINE MIR 120 243 -19 21 36 0 0 chr2 38824296 38824324 -214432259 + AT_rich Low_complexity Low_complexity 1 28 0 2083 109 14 0 chr2 38824460 38824764 -214431819 - AluY SINE Alu 0 308 1 295 337 60 6 chr2 38825821 38825987 -214430596 + L3 LINE CR1 185 359 -1218 1936 168 0 0 chr2 38826108 38826412 -214430171 + AluSx SINE Alu 1 304 -8 460 326 132 4 chr2 38826430 38826657 -214429926 + L3 LINE CR1 565 820 -757 2020 121 7 7 chr2 38826891 38827188 -214429395 - AluJo SINE Alu -15 297 1 376 286 191 6 chr2 38827380 38827558 -214429025 + L3 LINE CR1 1364 1574 -3 1225 137 0 0 chr2 38827760 38827935 -214428648 - AluSx SINE Alu -12 300 126 499 55 55 0 chr2 38827935 38828008 -214428575 - MADE1 DNA Mariner -3 77 1 970 111 0 0 chr2 38828008 38828134 -214428449 - AluSx SINE Alu -186 127 2 731 165 0 24 chr2 38828406 38828533 -214428050 + FLAM_C SINE Alu 1 124 -19 203 161 0 0 chr2 38829049 38829080 -214427503 + (TG)n Simple_repeat Simple_repeat 2 32 0 2212 116 0 0 chr2 38829156 38829450 -214427133 - AluSx SINE Alu -18 294 1 1653 87 0 9 chr2 38830140 38830358 -214426225 + AluSc SINE Alu 84 299 -10 275 283 61 0 chr2 38830518 38830617 -214425966 - MIR SINE MIR -82 180 76 2352 102 0 3 chr2 38830941 38831244 -214425339 + AluSx SINE Alu 1 302 -10 1928 156 0 14 chr2 38832116 38832411 -214424172 + AluJb SINE Alu 1 291 -21 464 233 277 0 chr2 38832561 38832763 -214423820 + MIR SINE MIR 5 262 0 21 36 0 0 chr2 38833288 38833316 -214423267 + AT_rich Low_complexity Low_complexity 1 28 0 258 275 0 0 chr2 38834663 38834723 -214421860 + MIR SINE MIR 38 97 -111 1799 193 113 16 chr2 38834758 38835209 -214421374 - MER50 LTR ERV1 0 734 240 277 263 6 103 chr2 38835451 38835607 -214420976 + MLT1J LTR MaLR 325 465 -46 293 313 38 31 chr2 38835932 38836092 -214420491 - MIR SINE MIR -5 257 97 1298 283 65 18 chr2 38836094 38836586 -214419997 - LTR38 LTR ERV1 -41 515 1 192 336 110 27 chr2 38938763 38938909 -214317674 - L2 LINE L2 -182 3090 2933 243 211 0 0 chr2 38939316 38939368 -214317215 + MIR3 SINE MIR 109 160 -48 1098 276 42 47 chr2 38939788 38940015 -214316568 + L2 LINE L2 2874 3100 -213 279 0 0 0 chr2 38940015 38940046 -214316537 + (CA)n Simple_repeat Simple_repeat 1 31 0 1098 276 42 47 chr2 38940046 38940246 -214316337 + L2 LINE L2 3100 3299 -14 590 325 16 11 chr2 38940409 38940600 -214315983 + MIR SINE MIR 21 212 -50 231 244 26 64 chr2 38940743 38940821 -214315762 + MIR3 SINE MIR 133 207 -1 402 286 33 0 chr2 38941176 38941267 -214315316 + MIR SINE MIR 36 129 -79 202 250 36 0 chr2 38941268 38941324 -214315259 + (TATG)n Simple_repeat Simple_repeat 3 60 0 1655 178 7 7 chr2 38941728 38942014 -214314569 + AluSx SINE Alu 1 286 -26 2009 91 4 0 chr2 38942236 38942490 -214314093 - AluSc SINE Alu -15 294 40 2154 117 0 0 chr2 38942572 38942862 -214313721 - AluSg SINE Alu -18 292 3 412 197 151 92 chr2 38943068 38943238 -214313345 + LTR16A1 LTR ERVL 203 392 -65 4200 89 15 0 chr2 38943238 38943777 -214312806 - L1PA14 LINE L1 -9 6152 5606 412 197 151 92 chr2 38943777 38943845 -214312738 + LTR16A1 LTR ERVL 392 455 -2 1020 155 0 0 chr2 38943966 38944121 -214312462 + FRAM SINE Alu 11 165 -11 2353 144 31 0 chr2 38946090 38946443 -214310140 - MLT1A1 LTR MaLR -1 364 1 276 262 69 69 chr2 38946762 38946907 -214309676 - MIR SINE MIR -71 191 47 2277 113 19 49 chr2 38947074 38947444 -214309139 + THE1B LTR MaLR 1 359 -5 758 296 84 48 chr2 38948724 38949161 -214307422 - MLT1J2 LTR MaLR 0 428 4 23 54 0 0 chr2 38949282 38949319 -214307264 + AT_rich Low_complexity Low_complexity 1 37 0 22 35 0 0 chr2 38949409 38949438 -214307145 + AT_rich Low_complexity Low_complexity 1 29 0 1262 185 13 26 chr2 38950491 38950775 -214305808 - L1MD2 LINE L1 -12 7760 6227 189 147 0 0 chr2 38950795 38950829 -214305754 + (TG)n Simple_repeat Simple_repeat 2 35 0 345 161 35 0 chr2 38951591 38951678 -214304905 + GA-rich Low_complexity Low_complexity 2 91 0 22 0 0 0 chr2 38951823 38951845 -214304738 + AT_rich Low_complexity Low_complexity 1 22 0 492 32 0 0 chr2 38952364 38952426 -214304157 + (CA)n Simple_repeat Simple_repeat 2 63 0 1264 252 27 39 chr2 38952734 38953146 -214303437 - LTR16B LTR ERVL -14 450 44 451 188 0 0 chr2 38953191 38953271 -214303312 - L1MA9 LINE L1 -38 6274 6195 1155 160 5 0 chr2 38954563 38954750 -214301833 + MER2 DNA MER2_type 23 210 -135 236 254 15 15 chr2 38954781 38954848 -214301735 + MER2 DNA MER2_type 274 340 -5 1524 175 36 39 chr2 38954887 38955196 -214301387 - AluJo SINE Alu -4 308 1 217 341 59 15 chr2 38955579 38955714 -214300869 + MIR3 SINE MIR 45 185 -23 * 467 318 99 67 chr2 38955684 38956286 -214300297 + L2 LINE L2 2652 3271 -1 211 268 85 24 chr2 38956289 38956371 -214300212 + MIR SINE MIR 100 186 -76 871 219 135 21 chr2 38956482 38956719 -214299864 + MER58 DNA MER1_type 7 270 -2150 23 33 0 0 chr2 38957097 38957127 -214299456 + AT_rich Low_complexity Low_complexity 1 30 0 273 98 0 0 chr2 38957222 38957263 -214299320 + (GA)n Simple_repeat Simple_repeat 2 42 0 776 187 0 8 chr2 38958786 38958909 -214297674 + FLAM_C SINE Alu 2 123 -20 292 278 28 37 chr2 38958948 38959056 -214297527 - HAL1b LINE L1 -50 1298 1192 2563 146 17 15 chr2 38959056 38959440 -214297143 + MSTB1 LTR MaLR 15 402 -30 234 81 0 0 chr2 38959440 38959477 -214297106 + (TA)n Simple_repeat Simple_repeat 2 38 0 2563 146 17 15 chr2 38959477 38959497 -214297086 + MSTB1 LTR MaLR 402 420 -12 469 257 105 51 chr2 38959532 38959674 -214296909 - HAL1b LINE L1 -183 1165 1032 2315 103 0 6 chr2 38959674 38959986 -214296597 + AluSg SINE Alu 1 310 0 469 257 105 51 chr2 38959986 38960656 -214295927 - HAL1b LINE L1 -316 1032 244 2215 99 24 0 chr2 38960656 38960949 -214295634 - AluSc SINE Alu -9 300 1 469 257 105 51 chr2 38960949 38961128 -214295455 - HAL1b LINE L1 -1104 244 76 204 197 0 33 chr2 38961319 38961380 -214295203 + T-rich Low_complexity Low_complexity 2 60 0 38999 86 9 8 chr2 38961386 38967513 -214289070 - L1PA6 LINE L1 -16 6138 11 180 179 0 0 chr2 38969371 38969410 -214287173 + GA-rich Low_complexity Low_complexity 2 40 0 410 242 24 32 chr2 38969576 38969700 -214286883 - L1ME1 LINE L1 -7 6159 6037 291 255 134 19 chr2 38969839 38969996 -214286587 - L1MCc LINE L1 -4958 1465 1291 396 0 0 0 chr2 38970448 38970492 -214286091 + (CA)n Simple_repeat Simple_repeat 2 45 0 202 360 73 0 chr2 38970550 38970686 -214285897 + L2 LINE L2 2429 2574 -740 534 173 19 0 chr2 38971071 38971175 -214285408 - MER53 DNA DNA -83 106 1 2894 265 36 32 chr2 38971400 38971563 -214285020 + L1M3c LINE L1 3 164 -5977 239 0 32 0 chr2 38971563 38971594 -214284989 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 2894 265 36 32 chr2 38971594 38972229 -214284354 + L1M3c LINE L1 164 804 -5337 1024 228 25 87 chr2 38972229 38972628 -214283955 + MLT1A1 LTR MaLR 1 428 0 3195 223 56 18 chr2 38972628 38973809 -214282774 + L1M3c LINE L1 856 2043 -4168 381 176 15 0 chr2 38974178 38974246 -214282337 - MER5A DNA MER1_type -84 105 37 277 270 56 11 chr2 38974179 38974268 -214282315 + MER5A DNA MER1_type 96 188 -1 * 2631 136 59 20 chr2 38974394 38974836 -214281747 - Tigger2 DNA MER2_type 0 2718 2260 385 188 0 14 chr2 38974812 38974881 -214281702 - Tigger2 DNA MER2_type -2649 69 2 * 3570 192 41 46 chr2 38974909 38976305 -214280278 + L1M4c LINE L1 2027 4271 -2111 2076 152 18 23 chr2 38976312 38976708 -214279875 + L1MA9 LINE L1 4987 5380 -766 300 187 0 27 chr2 38976697 38976772 -214279811 + L1MA9 LINE L1 5721 5793 -541 * 230 178 0 0 chr2 38976794 38976839 -214279744 + LTR66 LTR ERVL 394 438 -172 3314 114 25 25 chr2 38976844 38977044 -214279539 + L1MA9 LINE L1 5785 5984 -328 998 271 139 13 chr2 38977044 38977361 -214279222 + LTR18A LTR ERVL 1 357 0 3314 114 25 25 chr2 38977361 38977688 -214278895 + L1MA9 LINE L1 5983 6312 0 579 196 62 67 chr2 38978531 38978710 -214277873 + MER5B DNA MER1_type 1 178 0 261 282 24 24 chr2 38978723 38978808 -214277775 + MER5B DNA MER1_type 1 85 -93 1129 164 11 16 chr2 38978866 38979055 -214277528 + MER5A DNA MER1_type 1 188 -1 740 248 111 4 chr2 38979055 38979281 -214277302 + MIR SINE MIR 8 257 -5 188 194 0 0 chr2 38979829 38979860 -214276723 + MER5A DNA MER1_type 7 37 -152 342 45 0 0 chr2 38980626 38980670 -214275913 + (TG)n Simple_repeat Simple_repeat 2 45 0 348 197 30 15 chr2 38980695 38980827 -214275756 + (TA)n Simple_repeat Simple_repeat 1 134 0 192 40 0 0 chr2 38980827 38980852 -214275731 + (TG)n Simple_repeat Simple_repeat 1 25 0 2523 113 13 26 chr2 38984323 38984702 -214271881 + THE1C LTR MaLR 1 374 -1 626 260 117 26 chr2 38985090 38985321 -214271262 - MIR SINE MIR 0 262 11 331 238 101 60 chr2 38985565 38985817 -214270766 - MLT1H LTR MaLR -249 300 7 436 222 83 35 chr2 38985833 38985977 -214270606 - MIR SINE MIR 0 262 112 25 0 0 0 chr2 38987571 38987596 -214268987 + AT_rich Low_complexity Low_complexity 1 25 0 264 304 143 0 chr2 38987743 38987855 -214268728 - MIR SINE MIR -131 131 4 281 313 30 20 chr2 38987962 38988061 -214268522 + MIR SINE MIR 50 149 -59 191 255 64 0 chr2 38988558 38988605 -214267978 + L2 LINE L2 3264 3313 0 853 201 6 35 chr2 38990160 38990334 -214266249 + MER45A DNA AcHobo 3 171 -7 623 196 68 56 chr2 38990586 38990871 -214265712 + MLT1A2 LTR MaLR 1 457 0 443 159 0 34 chr2 38990875 38990963 -214265620 + MLT1A2-int LTR MaLR 5 89 -1562 208 248 119 50 chr2 38992167 38992268 -214264315 - L2 LINE L2 -46 3267 3160 281 248 208 27 chr2 38994285 38994434 -214262149 - MIR SINE MIR -56 206 31 314 255 54 82 chr2 38995108 38995292 -214261291 - MLT1K LTR MaLR -47 541 363 1156 209 38 0 chr2 38996005 38996216 -214260367 + MER58A DNA MER1_type 6 224 0 242 303 13 13 chr2 38996258 38996334 -214260249 - MIR SINE MIR -167 95 20 459 283 38 0 chr2 38996354 38996460 -214260123 + MIR SINE MIR 21 130 -132 237 235 0 44 chr2 38998344 38998412 -214258171 + (CA)n Simple_repeat Simple_repeat 2 66 0 2559 108 19 29 chr2 39001012 39001391 -214255192 + THE1C LTR MaLR 1 375 0 28 48 0 0 chr2 39001659 39001701 -214254882 + AT_rich Low_complexity Low_complexity 1 42 0 668 303 159 28 chr2 39001736 39002514 -214254069 - L2 LINE L2 -657 2657 1778 2521 124 36 3 chr2 39002768 39003131 -214253452 - THE1C LTR MaLR 0 375 1 1884 189 54 16 chr2 39004299 39004670 -214251913 - MLT1B LTR MaLR 0 390 6 1969 209 82 15 chr2 39004725 39005198 -214251385 - MLT1D LTR MaLR 0 505 1 21 0 0 0 chr2 39005792 39005813 -214250770 + AT_rich Low_complexity Low_complexity 1 21 0 478 123 25 12 chr2 39007097 39007178 -214249405 - Tigger5 DNA MER2_type 0 2323 2242 2057 70 0 8 chr2 39007650 39007908 -214248675 + AluY SINE Alu 47 302 -9 2144 118 14 0 chr2 39007916 39008203 -214248380 + AluSx SINE Alu 1 291 -21 1015 98 164 89 chr2 39011091 39011305 -214245278 - MER30 DNA MER1_type 0 230 1 21 36 0 0 chr2 39012360 39012388 -214244195 + AT_rich Low_complexity Low_complexity 1 28 0 805 233 141 31 chr2 39014808 39015257 -214241326 + MLT1E LTR MaLR 1 593 0 26 0 0 0 chr2 39016257 39016283 -214240300 + AT_rich Low_complexity Low_complexity 1 26 0 469 136 0 37 chr2 39016284 39016357 -214240226 + FLAM_A SINE Alu 58 129 -182 1639 192 29 13 chr2 39016357 39016664 -214239919 + AluJo SINE Alu 1 312 0 299 296 105 17 chr2 39017661 39017833 -214238750 - MIR SINE MIR -13 249 63 777 303 88 12 chr2 39017944 39018353 -214238230 + L1MC4a LINE L1 5467 5906 -1902 2651 58 0 0 chr2 39019082 39019393 -214237190 + AluY SINE Alu 1 311 0 1502 154 7 40 chr2 39019789 39020062 -214236521 - AluJo SINE Alu -48 264 1 303 270 185 57 chr2 39021376 39021728 -214234855 + L3 LINE CR1 1022 1418 -159 21 36 0 0 chr2 39024167 39024195 -214232388 + GC_rich Low_complexity Low_complexity 1 28 0 1052 170 39 61 chr2 39024798 39024908 -214231675 + MER58A DNA MER1_type 1 112 -2308 1251 170 9 14 chr2 39024908 39025126 -214231457 + MER20 DNA MER1_type 1 217 -2 1052 170 39 61 chr2 39025126 39025244 -214231339 + MER58A DNA MER1_type 112 224 0 258 152 165 25 chr2 39025373 39025452 -214231131 + MER5C DNA MER1_type 6 95 -229 232 192 39 39 chr2 39025596 39025674 -214230909 + MER5C DNA MER1_type 247 324 0 286 77 0 39 chr2 39028251 39028286 -214228297 + (TG)n Simple_repeat Simple_repeat 1 83 0 286 77 0 39 chr2 39028286 39028338 -214228245 + (TG)n Simple_repeat Simple_repeat 2 51 0 270 303 61 65 chr2 39028591 39028822 -214227761 + L3 LINE CR1 654 883 -694 220 240 120 30 chr2 39029131 39029231 -214227352 + MIR3 SINE MIR 100 208 0 2085 108 0 11 chr2 39030071 39030399 -214226184 + AluSq SINE Alu 1 325 0 317 235 0 0 chr2 39030446 39030514 -214226069 - L2 LINE L2 -11 3302 3235 2064 175 57 71 chr2 39030890 39031081 -214225502 + MLT2A2 LTR ERVL 1 193 -361 2274 79 0 0 chr2 39031081 39031384 -214225199 + AluY SINE Alu 1 303 0 2064 175 57 71 chr2 39031384 39031749 -214224834 + MLT2A2 LTR ERVL 193 554 0 1926 133 10 0 chr2 39031948 39032250 -214224333 + L1PA13 LINE L1 5840 6144 -19 503 137 0 0 chr2 39032254 39032327 -214224256 + MLT2A2 LTR ERVL 337 409 -44 392 214 58 10 chr2 39033429 39033532 -214223051 - MER103 DNA DNA -7 159 52 437 220 50 0 chr2 39035032 39035132 -214221451 + MIR SINE MIR 47 151 -111 1675 160 108 7 chr2 39035133 39035440 -214221143 - MER44D DNA MER2_type -1 608 1 683 212 127 0 chr2 39035537 39035726 -214220857 - MIR SINE MIR -14 248 36 428 323 30 0 chr2 39035852 39036016 -214220567 + MIR SINE MIR 74 242 -20 204 40 0 0 chr2 39036287 39036312 -214220271 + (TAA)n Simple_repeat Simple_repeat 2 26 0 189 0 0 0 chr2 39036422 39036443 -214220140 + (A)n Simple_repeat Simple_repeat 1 21 0 22 0 0 0 chr2 39037671 39037693 -214218890 + AT_rich Low_complexity Low_complexity 1 22 0 194 81 27 0 chr2 39038870 39038907 -214217676 + (CGGGG)n Simple_repeat Simple_repeat 1 38 0 25 0 0 0 chr2 39038993 39039018 -214217565 + GC_rich Low_complexity Low_complexity 1 25 0 27 49 0 0 chr2 39039721 39039762 -214216821 + GC_rich Low_complexity Low_complexity 1 41 0 32 26 0 0 chr2 39040449 39040488 -214216095 + AT_rich Low_complexity Low_complexity 1 39 0 414 132 0 0 chr2 39040942 39041018 -214215565 + (TCCCC)n Simple_repeat Simple_repeat 2 77 0 601 103 35 0 chr2 39041034 39041121 -214215462 - AluJ/FLAM SINE Alu -218 94 5 621 263 240 20 chr2 39042212 39042604 -214213979 + L2 LINE L2 2834 3311 -2 237 35 0 0 chr2 39043640 39043669 -214212914 - L1MA9 LINE L1 0 6312 6284 985 253 52 30 chr2 39043679 39044043 -214212540 + L2 LINE L2 2942 3313 0 1835 119 83 7 chr2 39044406 39044683 -214211900 + AluSg1 SINE Alu 1 298 -11 189 303 40 40 chr2 39045814 39045890 -214210693 - L2 LINE L2 -6 3266 3191 23 0 0 0 chr2 39045961 39045984 -214210599 + AT_rich Low_complexity Low_complexity 1 23 0 1837 174 52 6 chr2 39046307 39046652 -214209931 + MLT1A1 LTR MaLR 4 364 -1 3039 164 12 37 chr2 39047573 39048170 -214208413 - L1MC1 LINE L1 -1 6332 5751 1807 147 41 26 chr2 39048425 39048765 -214207818 + MLT1B LTR MaLR 5 349 -41 244 139 0 0 chr2 39048828 39048864 -214207719 + MLT1B LTR MaLR 353 388 -2 458 277 8 23 chr2 39049399 39049529 -214207054 - MIR3 SINE MIR -15 193 66 413 246 39 78 chr2 39049660 39049839 -214206744 + MIR SINE MIR 20 191 -71 2123 182 101 22 chr2 39050448 39050954 -214205629 + MER74A LTR ERVL 1 546 -12 8563 172 67 39 chr2 39051400 39053119 -214203464 + L1MC3 LINE L1 5433 7182 -603 819 189 7 7 chr2 39053119 39053267 -214203316 + FRAM SINE Alu 22 169 -7 8563 172 67 39 chr2 39053267 39053889 -214202694 + L1MC3 LINE L1 7182 7785 0 25 31 0 0 chr2 39053972 39054004 -214202579 + AT_rich Low_complexity Low_complexity 1 32 0 234 329 44 76 chr2 39054701 39054859 -214201724 - L2 LINE L2 -4 3268 3116 283 238 250 48 chr2 39055071 39055184 -214201399 + L2 LINE L2 2747 2836 -436 2737 84 19 3 chr2 39055184 39055553 -214201030 - THE1C LTR MaLR 0 375 1 283 238 250 48 chr2 39055553 39055702 -214200881 + L2 LINE L2 2836 3043 -229 339 227 41 31 chr2 39057901 39057998 -214198585 - MIR SINE MIR -99 163 66 7260 42 2 2 chr2 39057998 39059596 -214196987 + L1PA4 LINE L1 4558 6155 0 2234 102 7 7 chr2 39061376 39061679 -214194904 + AluSg SINE Alu 1 303 -7 1262 153 28 5 chr2 39061687 39061903 -214194680 + AluJb SINE Alu 86 306 -6 27 29 0 0 chr2 39062065 39062099 -214194484 + AT_rich Low_complexity Low_complexity 1 34 0 22 56 0 0 chr2 39063184 39063220 -214193363 + AT_rich Low_complexity Low_complexity 1 36 0 3296 226 36 3 chr2 39063814 39064768 -214191815 - L1M4 LINE L1 -799 5347 4363 791 223 47 10 chr2 39064764 39064957 -214191626 - L1MDa LINE L1 -6191 349 150 * 2559 45 0 16 chr2 39065235 39065548 -214191035 - AluY SINE Alu -3 308 1 436 354 89 43 chr2 39066398 39067311 -214189272 - L2 LINE L2 -11 3261 2307 441 307 42 34 chr2 39067327 39067565 -214189018 - L2 LINE L2 -2907 407 168 234 0 0 0 chr2 39068217 39068243 -214188340 + (TTTTA)n Simple_repeat Simple_repeat 1 26 0 1028 121 6 0 chr2 39068243 39068409 -214188174 - MER2 DNA MER2_type -96 249 83 12492 179 7 11 chr2 39068416 39072086 -214184497 - L1PB1 LINE L1 -5 6146 2496 333 320 99 41 chr2 39072528 39072700 -214183883 - MIR3 SINE MIR -9 199 18 292 310 121 0 chr2 39073027 39073143 -214183440 + L2 LINE L2 3133 3262 -10 274 67 44 0 chr2 39073309 39073354 -214183229 + MADE1 DNA Mariner 34 80 0 691 254 198 8 chr2 39073355 39073729 -214182854 - MLT1H LTR MaLR -29 520 76 199 359 23 23 chr2 39074287 39074418 -214182165 + MIR SINE MIR 36 166 -96 1600 181 27 24 chr2 39074807 39075105 -214181478 - AluJb SINE Alu -13 299 1 215 328 31 0 chr2 39075772 39075836 -214180747 - L2 LINE L2 0 3313 3248 351 318 48 79 chr2 39075871 39075967 -214180616 - L2 LINE L2 -251 3062 2965 333 0 0 0 chr2 39075967 39076004 -214180579 + (TG)n Simple_repeat Simple_repeat 2 38 0 351 318 48 79 chr2 39076004 39076270 -214180313 - L2 LINE L2 -348 2965 2723 292 303 70 21 chr2 39076316 39076458 -214180125 - L2 LINE L2 -578 2736 2588 231 236 200 45 chr2 39077801 39077911 -214178672 + MIR SINE MIR 16 142 -120 183 71 0 143 chr2 39078046 39078088 -214178495 + MIR SINE MIR 227 262 0 1133 206 17 38 chr2 39078121 39078413 -214178170 + MLT1D LTR MaLR 2 287 -218 202 343 45 0 chr2 39079288 39079355 -214177228 + L2 LINE L2 3202 3271 -1 240 175 62 38 chr2 39079412 39079492 -214177091 - L1ME2 LINE L1 -6 6227 6146 377 228 24 73 chr2 39079516 39079679 -214176904 - L1ME2 LINE L1 -177 6056 5903 2489 83 3 0 chr2 39079679 39079991 -214176592 - AluSp SINE Alu 0 313 1 377 228 24 73 chr2 39079991 39080033 -214176550 - L1ME2 LINE L1 -330 5903 5861 1820 201 20 5 chr2 39080045 39080484 -214176099 - L1ME2 LINE L1 -345 5888 5443 430 223 0 0 chr2 39080499 39080593 -214175990 - Tigger7 DNA MER2_type -2 2489 2396 1320 180 35 8 chr2 39080597 39080853 -214175730 - Tigger7 DNA MER2_type -2223 264 2 6041 246 76 40 chr2 39080854 39083650 -214172933 - L1ME2 LINE L1 -780 5435 2538 915 286 63 51 chr2 39083647 39084466 -214172117 - L1ME2 LINE L1 -4181 2215 1387 * 600 207 93 81 chr2 39084675 39084921 -214171662 - MLT1A1 LTR MaLR 0 365 117 471 224 63 0 chr2 39084968 39085111 -214171472 - MER104 DNA Tc2 0 180 29 961 190 11 16 chr2 39085128 39085312 -214171271 + MER5A DNA MER1_type 7 189 0 214 362 28 91 chr2 39085377 39085664 -214170919 - L2 LINE L2 -9 3263 2995 429 283 137 24 chr2 39087447 39087659 -214168924 + MIR SINE MIR 15 250 -12 222 355 182 9 chr2 39089081 39089191 -214167392 - L2 LINE L2 0 3272 3144 2029 151 0 7 chr2 39089424 39089722 -214166861 - AluSx SINE Alu -12 300 5 274 346 26 43 chr2 39089884 39090115 -214166468 - L2 LINE L2 -178 3094 2868 41069 50 4 0 chr2 39090345 39096459 -214160124 + L1PA5 LINE L1 1 6137 -17 423 92 0 0 chr2 39096459 39096524 -214160059 + (TA)n Simple_repeat Simple_repeat 2 66 0 461 259 157 12 chr2 39096723 39096889 -214159694 - MIR3 SINE MIR -7 201 12 402 57 0 0 chr2 39097061 39097114 -214159469 + (CCA)n Simple_repeat Simple_repeat 1 53 0 466 280 33 35 chr2 39097883 39098060 -214158523 + MIR3 SINE MIR 15 191 -17 295 352 65 26 chr2 39098061 39098291 -214158292 + L3b LINE CR1 1264 1502 -81 252 276 58 23 chr2 39098889 39098976 -214157607 + MER91C DNA MER1_type 19 108 -32 218 310 0 35 chr2 39100668 39100726 -214155857 - L2 LINE L2 -26 3246 3191 23 0 0 0 chr2 39100766 39100789 -214155794 + AT_rich Low_complexity Low_complexity 1 23 0 262 283 42 78 chr2 39100820 39101011 -214155572 - L2 LINE L2 -214 3058 2875 1671 193 0 24 chr2 39103445 39103741 -214152842 + AluJo SINE Alu 1 289 -23 2907 237 40 22 chr2 39103759 39103957 -214152626 + L1MEc LINE L1 45 238 -6158 1803 145 46 40 chr2 39103957 39104330 -214152253 - THE1C LTR MaLR 0 375 1 2907 237 40 22 chr2 39104330 39104937 -214151646 + L1MEc LINE L1 238 864 -5532 332 230 14 0 chr2 39104922 39104996 -214151587 - MLT1F1 LTR MaLR -488 79 5 * 1268 153 22 22 chr2 39105450 39105673 -214150910 - MER74A LTR ERVL 0 558 336 628 212 34 14 chr2 39105673 39105819 -214150764 + L1MEc LINE L1 545 693 -5703 1400 231 26 35 chr2 39105819 39106161 -214150422 - MER74A LTR ERVL -215 343 5 765 221 55 20 chr2 39106740 39106939 -214149644 + L1MEc LINE L1 37 242 -6154 962 114 43 104 chr2 39106939 39107150 -214149433 - THE1C LTR MaLR 0 375 178 1502 128 0 14 chr2 39108518 39108737 -214147846 - AluSg/x SINE Alu -14 296 81 2160 116 135 5 chr2 39109013 39109392 -214147191 + MSTA LTR MaLR 1 428 0 630 248 95 58 chr2 39110105 39110347 -214146236 + MIR SINE MIR 1 251 -11 252 235 0 0 chr2 39110353 39110421 -214146162 + (ATG)n Simple_repeat Simple_repeat 1 68 0 2328 91 0 28 chr2 39111745 39112086 -214144497 - AluSg SINE Alu 0 310 1 2502 139 29 2 chr2 39112103 39112520 -214144063 + L1MA5 LINE L1 5873 6300 0 2352 108 0 0 chr2 39113851 39114148 -214142435 + AluSx SINE Alu 6 302 -10 313 279 91 42 chr2 39114253 39114418 -214142165 + MIR SINE MIR 20 192 -70 340 209 15 0 chr2 39115136 39115203 -214141380 - L2 LINE L2 -7 3265 3198 534 259 54 5 chr2 39115415 39115600 -214140983 - L3 LINE CR1 -244 1333 1140 258 246 14 0 chr2 39116904 39116973 -214139610 + MLT1L LTR MaLR 6 75 -540 603 304 60 30 chr2 39117013 39117312 -214139271 + MLT1J LTR MaLR 105 412 -99 233 266 16 0 chr2 39117312 39117376 -214139207 + (CCCA)n Simple_repeat Simple_repeat 3 67 0 503 269 130 78 chr2 39117386 39117780 -214138803 + L2 LINE L2 2390 2811 -503 4014 194 25 45 chr2 39117780 39118769 -214137814 + LTR5 LTR ERVK 1 969 0 503 269 130 78 chr2 39118769 39118821 -214137762 + L2 LINE L2 2811 2859 -455 424 321 118 14 chr2 39118881 39119168 -214137415 + L2 LINE L2 2994 3310 -3 2436 90 0 0 chr2 39119684 39119995 -214136588 + AluY SINE Alu 1 311 0 435 324 19 29 chr2 39119995 39120195 -214136388 + MIR SINE MIR 41 240 -22 2226 145 13 20 chr2 39120212 39120430 -214136153 - MLT1B LTR MaLR 0 390 175 1860 160 3 26 chr2 39120430 39120737 -214135846 - AluJb SINE Alu -12 300 1 2226 145 13 20 chr2 39120737 39120911 -214135672 - MLT1B LTR MaLR -215 175 1 324 98 0 0 chr2 39121605 39121656 -214134927 - MADE1 DNA Mariner 0 80 30 310 205 63 79 chr2 39121695 39121822 -214134761 + MIR SINE MIR 92 216 -46 434 284 17 0 chr2 39121869 39121985 -214134598 - MIR SINE MIR -2 260 143 392 211 184 0 chr2 39122050 39122164 -214134419 - MER5A DNA MER1_type -6 183 49 453 131 75 75 chr2 39122164 39122271 -214134312 + Charlie7 DNA MER1_type 1588 1694 -918 3385 141 28 0 chr2 39122342 39122909 -214133674 + L1MB5 LINE L1 5378 5960 -214 1215 174 18 0 chr2 39122968 39123192 -214133391 - L1M4 LINE L1 -1057 5089 4862 1527 176 101 3 chr2 39123192 39123488 -214133095 + MLT2C2 LTR ERVL 1 325 -139 1892 205 17 7 chr2 39123490 39123900 -214132683 - L1M4 LINE L1 -1969 4177 3764 316 170 290 0 chr2 39124740 39124840 -214131743 - L3b LINE CR1 -168 1415 1287 358 205 39 0 chr2 39126086 39126164 -214130419 + MIR SINE MIR 43 123 -139 325 293 58 7 chr2 39126326 39126464 -214130119 - MIR SINE MIR -54 154 10 740 282 80 52 chr2 39127385 39127786 -214128797 - L2 LINE L2 -14 3299 2888 2124 127 3 13 chr2 39127967 39128274 -214128309 + AluSx SINE Alu 1 304 -8 518 269 63 17 chr2 39128832 39129007 -214127576 - L2 LINE L2 -49 3264 3082 2285 88 7 3 chr2 39130301 39130597 -214125986 + AluSc SINE Alu 1 297 -12 276 30 0 0 chr2 39130657 39130690 -214125893 + (TTCA)n Simple_repeat Simple_repeat 3 35 0 424 275 171 39 chr2 39130690 39130989 -214125594 - L2 LINE L2 -15 3298 2960 902 289 53 21 chr2 39131230 39131648 -214124935 + MLT1H LTR MaLR 111 541 -8 924 233 50 50 chr2 39131660 39132063 -214124520 + HAL1b LINE L1 944 1346 -2 262 211 0 0 chr2 39132093 39132150 -214124433 + L1MC4a LINE L1 6809 6865 -943 * 904 205 77 17 chr2 39132143 39132377 -214124206 + L1MD3 LINE L1 7731 7978 -17 473 256 58 0 chr2 39135064 39135185 -214121398 + MER94 DNA DNA 2 129 -5 1271 194 50 90 chr2 39136921 39137400 -214119183 - MLT2C2 LTR ERVL 0 464 5 2365 102 0 0 chr2 39137575 39137879 -214118704 + AluSq SINE Alu 1 304 -9 2255 101 104 0 chr2 39138156 39138483 -214118100 + THE1B LTR MaLR 1 361 -3 366 265 11 81 chr2 39139751 39139936 -214116647 + MER5B DNA MER1_type 7 178 0 190 266 16 31 chr2 39139984 39140048 -214116535 - MIR3 SINE MIR -3 205 143 215 304 27 47 chr2 39143491 39143639 -214112944 + MER5A DNA MER1_type 17 161 -28 199 191 21 0 chr2 39144603 39144650 -214111933 - L2 LINE L2 -2 3270 3223 216 0 0 0 chr2 39145427 39145451 -214111132 + (TTCA)n Simple_repeat Simple_repeat 4 27 0 246 327 94 13 chr2 39147739 39147898 -214108685 + L2 LINE L2 3101 3272 0 373 286 86 14 chr2 39148605 39148745 -214107838 + MIR SINE MIR 48 197 -65 701 270 32 5 chr2 39149611 39149796 -214106787 - MLT1I LTR MaLR -6 403 214 2284 112 3 10 chr2 39150560 39150874 -214105709 - AluSx SINE Alu 0 312 1 553 198 25 0 chr2 39151268 39151389 -214105194 + MIR SINE MIR 90 213 -49 192 77 0 0 chr2 39151543 39151569 -214105014 + (A)n Simple_repeat Simple_repeat 1 26 0 277 206 20 0 chr2 39151609 39151677 -214104906 + MIR SINE MIR 85 142 -66 446 123 41 0 chr2 39152129 39152202 -214104381 - MADE1 DNA Mariner -4 76 1 935 237 92 100 chr2 39153135 39153676 -214102907 - MLT1H LTR MaLR 0 549 13 278 287 83 32 chr2 39153804 39153961 -214102622 - MIR SINE MIR -19 243 79 224 210 65 0 chr2 39153981 39154043 -214102540 + MIR SINE MIR 124 189 -73 307 339 30 26 chr2 39155028 39155201 -214101382 + MIR SINE MIR 19 192 -62 424 293 227 0 chr2 39155346 39155575 -214101008 + HAL1 LINE L1 1 281 -2226 * 1161 250 88 0 chr2 39155568 39155840 -214100743 + HAL1 LINE L1 596 891 -1616 * 8546 161 43 11 chr2 39155833 39157459 -214099124 - L1 LINE L1 -1810 4336 2659 4958 237 77 24 chr2 39157457 39157523 -214099060 + HAL1 LINE L1 895 956 -1551 * 2225 150 3 33 chr2 39157523 39157882 -214098701 + MER7A DNA MER2_type 1 346 0 4958 237 77 24 chr2 39157882 39159344 -214097239 + HAL1 LINE L1 956 2504 -3 239 290 0 14 chr2 39159591 39159660 -214096923 + L3 LINE CR1 1495 1562 -15 1272 63 31 0 chr2 39159829 39159988 -214096595 + L1PA13 LINE L1 6000 6163 0 2862 117 44 2 chr2 39160154 39160563 -214096020 - MSTB LTR MaLR 0 426 1 822 301 103 30 chr2 39161316 39161715 -214094868 - LTR16B LTR ERVL 0 464 37 555 108 0 24 chr2 39161726 39161809 -214094774 - FLAM_C SINE Alu -7 136 56 306 313 173 6 chr2 39164123 39164331 -214092252 + MIR SINE MIR 8 248 -14 640 261 116 9 chr2 39165153 39165368 -214091215 + MIR SINE MIR 25 262 0 1453 146 21 4 chr2 39167221 39167460 -214089123 - MER49 LTR ERV1 -680 243 1 2286 109 3 0 chr2 39168423 39168725 -214087858 - AluSq SINE Alu -10 303 1 369 43 0 0 chr2 39168827 39168874 -214087709 + (TG)n Simple_repeat Simple_repeat 2 48 0 2345 192 54 23 chr2 39169639 39170124 -214086459 - MLT1D LTR MaLR 0 505 6 200 204 23 0 chr2 39171035 39171079 -214085504 + (TGGA)n Simple_repeat Simple_repeat 4 48 0 768 164 249 4 chr2 39172169 39172425 -214084158 - MER7A DNA MER2_type 0 337 1 855 130 51 0 chr2 39172864 39173002 -214083581 - L1MB8 LINE L1 -5 6173 6029 11950 35 1 0 chr2 39173002 39175113 -214081470 - L1PA4 LINE L1 -3 6152 4042 4058 169 25 20 chr2 39175113 39175183 -214081400 - L1MB7 LINE L1 -143 6041 5973 2372 107 54 28 chr2 39175183 39175537 -214081046 + THE1B LTR MaLR 1 363 -1 4058 169 25 20 chr2 39175537 39175590 -214080993 - L1MB7 LINE L1 -211 5973 5922 2099 153 86 3 chr2 39175590 39175950 -214080633 + MLT1B LTR MaLR 1 390 0 4058 169 25 20 chr2 39175950 39176716 -214079867 - L1MB7 LINE L1 -262 5922 5148 726 293 127 30 chr2 39176716 39177181 -214079402 + LTR67 LTR ERVL 41 550 -7 2420 96 59 36 chr2 39177442 39177798 -214078785 + THE1B LTR MaLR 1 364 0 345 24 0 0 chr2 39179830 39179872 -214076711 + (TA)n Simple_repeat Simple_repeat 2 43 0 1712 149 0 7 chr2 39179874 39180156 -214076427 + AluY SINE Alu 2 281 -30 207 0 0 0 chr2 39180170 39180193 -214076390 + (TA)n Simple_repeat Simple_repeat 2 24 0 2544 141 0 0 chr2 39180193 39180554 -214076029 - L1PB4 LINE L1 -14 6142 5782 315 122 0 0 chr2 39180554 39180603 -214075980 + (TA)n Simple_repeat Simple_repeat 2 50 0 1630 110 61 4 chr2 39180604 39180849 -214075734 - L1PB4 LINE L1 -367 5789 5531 330 324 55 0 chr2 39181479 39181624 -214074959 - MIR SINE MIR -20 242 90 204 231 179 26 chr2 39181980 39182058 -214074525 + MIR SINE MIR 10 99 -163 1361 249 29 36 chr2 39182901 39183343 -214073240 + L1ME1 LINE L1 5723 6161 -5 221 343 0 0 chr2 39183348 39183421 -214073162 + MIR SINE MIR 186 258 -4 2623 43 0 0 chr2 39184411 39184711 -214071872 - AluY SINE Alu -11 300 1 317 328 155 0 chr2 39185408 39185524 -214071059 - L2 LINE L2 -5 3267 3134 315 327 77 19 chr2 39187677 39187885 -214068698 - MIR SINE MIR -39 223 4 258 239 0 0 chr2 39188733 39188804 -214067779 + (CA)n Simple_repeat Simple_repeat 2 72 0 1194 165 85 18 chr2 39188804 39189028 -214067555 + MER8 DNA MER2_type 1 239 0 379 257 83 33 chr2 39189558 39189721 -214066862 + MLT1F1 LTR MaLR 14 184 -365 227 284 0 14 chr2 39189753 39189827 -214066756 + CT-rich Low_complexity Low_complexity 2 74 0 823 264 20 51 chr2 39189873 39190127 -214066456 + MLT1F1 LTR MaLR 322 567 0 184 242 0 0 chr2 39190323 39190356 -214066227 + L3b LINE CR1 1480 1512 -71 * 302 355 36 7 chr2 39190353 39190491 -214066092 + MER5A DNA MER1_type 47 188 -1 194 392 0 0 chr2 39190841 39190920 -214065663 + MIR SINE MIR 34 112 -150 1155 265 105 58 chr2 39190922 39191495 -214065088 - L1ME4a LINE L1 -139 5982 5383 221 232 71 0 chr2 39191514 39191570 -214065013 + MIR SINE MIR 126 185 -77 1999 149 0 3 chr2 39192139 39192625 -214063958 - AluJb SINE Alu 0 312 1 24 0 0 0 chr2 39192970 39192994 -214063589 + AT_rich Low_complexity Low_complexity 1 24 0 349 364 59 0 chr2 39193889 39194125 -214062458 - MIR SINE MIR -3 259 10 467 284 104 27 chr2 39195117 39195269 -214061314 - MIR SINE MIR -21 241 65 1528 225 139 26 chr2 39195269 39195723 -214060860 - MLT1D LTR MaLR 0 505 1 467 284 104 27 chr2 39195723 39195792 -214060791 - MIR SINE MIR -197 65 3 202 65 22 43 chr2 39197814 39197860 -214058723 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 1453 205 23 23 chr2 39197945 39198252 -214058331 + AluJo SINE Alu 1 307 -5 527 239 34 40 chr2 39198930 39199106 -214057477 + MER5B DNA MER1_type 1 175 -3 193 298 58 66 chr2 39199797 39199918 -214056665 - MIR3 SINE MIR -86 122 3 441 319 39 39 chr2 39201250 39201432 -214055151 + MIR SINE MIR 2 183 -79 218 319 111 30 chr2 39201572 39201707 -214054876 - L3 LINE CR1 -153 1424 1279 230 250 67 0 chr2 39201735 39201795 -214054788 + MER91C DNA MER1_type 36 99 -41 354 313 159 31 chr2 39201917 39202112 -214054471 - L3 LINE CR1 -357 1220 1001 207 0 0 0 chr2 39202269 39202292 -214054291 + (TG)n Simple_repeat Simple_repeat 2 24 0 2448 81 0 0 chr2 39202960 39203257 -214053326 + AluSx SINE Alu 3 299 -13 1047 164 113 94 chr2 39203538 39203856 -214052727 - MSTC LTR MaLR 0 428 51 884 105 126 14 chr2 39204037 39204176 -214052407 - AluSc SINE Alu -17 292 137 2151 109 21 0 chr2 39204176 39204459 -214052124 - AluSx SINE Alu -23 289 1 237 198 93 58 chr2 39204505 39204591 -214051992 + MIR SINE MIR 103 191 -71 2440 76 3 0 chr2 39205064 39205365 -214051218 - AluY SINE Alu -9 302 1 234 294 0 15 chr2 39207859 39207927 -214048656 + MIR SINE MIR 25 91 -117 2266 73 0 11 chr2 39208154 39208485 -214048098 + AluY SINE Alu 1 328 0 219 318 24 72 chr2 39209898 39210030 -214046553 + MIR SINE MIR 18 147 -61 1236 272 102 49 chr2 39210639 39211355 -214045228 - L2 LINE L2 -209 3104 2338 1774 179 3 13 chr2 39211355 39211668 -214044915 - AluJb SINE Alu 0 312 3 1236 272 102 49 chr2 39211668 39211811 -214044772 - L2 LINE L2 -975 2338 2204 613 293 130 9 chr2 39211811 39212135 -214044448 - L2 LINE L2 -1696 1618 1256 200 236 18 0 chr2 39212133 39212188 -214044395 + L2 LINE L2 3253 3308 -5 * 226 220 59 129 chr2 39213292 39213547 -214043036 - HAL1 LINE L1 -868 1639 1403 236 206 132 0 chr2 39213582 39213650 -214042933 - L1MEd LINE L1 -4864 1255 1179 518 157 11 0 chr2 39213653 39213742 -214042841 - AluJo/FRAM SINE Alu -15 297 208 * 754 132 0 0 chr2 39213741 39213847 -214042736 - AluJo/FLAM SINE Alu -205 107 2 325 275 42 78 chr2 39213858 39214051 -214042532 - L1MEd LINE L1 -4945 1174 989 531 234 168 58 chr2 39214429 39214570 -214042013 - L1MEd LINE L1 -5571 548 424 1996 128 0 7 chr2 39214570 39214895 -214041688 - AluSx SINE Alu 0 324 2 531 234 168 58 chr2 39214895 39215026 -214041557 - L1MEd LINE L1 -5695 424 245 2925 264 81 24 chr2 39215132 39215344 -214041239 + L2 LINE L2 1388 1586 -1728 959 101 17 6 chr2 39215344 39215522 -214041061 + (TC)n Simple_repeat Simple_repeat 1 180 0 2925 264 81 24 chr2 39215522 39216344 -214040239 + L2 LINE L2 1586 2481 -833 222 37 0 0 chr2 39217083 39217110 -214039473 + (A)n Simple_repeat Simple_repeat 1 27 0 288 254 0 0 chr2 39218777 39218836 -214037747 + MIR SINE MIR 20 78 -184 2077 120 3 0 chr2 39219787 39220108 -214036475 - AluSx SINE Alu 0 325 4 276 311 65 39 chr2 39220504 39220764 -214035819 + L2 LINE L2 2991 3257 -56 1787 167 0 25 chr2 39221864 39222181 -214034402 + AluJb SINE Alu 1 309 -3 2439 73 3 0 chr2 39222440 39222740 -214033843 - AluY SINE Alu -10 301 1 232 186 175 72 chr2 39222934 39223031 -214033552 + MIR SINE MIR 46 152 -110 611 230 54 71 chr2 39223063 39223302 -214033281 + LTR16A LTR ERVL 203 437 -13 224 258 169 11 chr2 39223686 39223775 -214032808 - MIR SINE MIR -135 127 25 23 0 0 0 chr2 39226037 39226060 -214030523 + AT_rich Low_complexity Low_complexity 1 23 0 1762 126 87 25 chr2 39226062 39226377 -214030206 + AluSx SINE Alu 1 332 0 2034 152 58 28 chr2 39228062 39228720 -214027863 - LTR1B LTR ERV1 0 826 110 271 286 134 0 chr2 39229124 39229243 -214027340 + L2 LINE L2 3137 3271 -1 268 274 102 88 chr2 39230589 39230874 -214025709 + L2 LINE L2 2565 2853 -461 344 286 64 49 chr2 39231523 39231917 -214024666 - LTR33A LTR ERVL 0 523 66 260 206 59 24 chr2 39233301 39233471 -214023112 + (TTATA)n Simple_repeat Simple_repeat 2 177 0 * 279 200 65 12 chr2 39233351 39233521 -214023062 + (TA)n Simple_repeat Simple_repeat 1 179 0 343 280 21 11 chr2 39233589 39233682 -214022901 + MER119 DNA MER1_type 2 95 -488 357 226 130 0 chr2 39233691 39233806 -214022777 + MER119 DNA MER1_type 452 581 -2 495 277 39 13 chr2 39234249 39234404 -214022179 + MIR SINE MIR 96 254 -8 183 42 0 0 chr2 39234409 39234433 -214022150 + (TTA)n Simple_repeat Simple_repeat 1 24 0 233 241 37 0 chr2 39234497 39234551 -214022032 + L2 LINE L2 3216 3271 -1 256 326 75 48 chr2 39236747 39236894 -214019689 - L2 LINE L2 -176 3096 2946 290 279 8 62 chr2 39236993 39237122 -214019461 - MIR SINE MIR -17 245 124 240 374 22 63 chr2 39237240 39237510 -214019073 - L2 LINE L2 -507 2807 2549 1422 197 9 38 chr2 39237761 39238076 -214018507 - MLT1D LTR MaLR -1 504 199 1366 158 0 21 chr2 39238070 39238304 -214018279 - MLT1D LTR MaLR -269 236 8 * 432 344 32 28 chr2 39238372 39238590 -214017993 - LTR67 LTR ERVL -273 284 66 1763 173 7 13 chr2 39238621 39238927 -214017656 + AluJb SINE Alu 1 304 -8 415 296 105 46 chr2 39239084 39239408 -214017175 + L3 LINE CR1 1201 1543 -34 2241 117 0 7 chr2 39239492 39239801 -214016782 - AluSx SINE Alu -5 307 1 231 209 0 0 chr2 39240643 39240686 -214015897 + (TG)n Simple_repeat Simple_repeat 1 43 0 218 269 30 0 chr2 39241178 39241245 -214015338 + CT-rich Low_complexity Low_complexity 5 73 0 426 20 0 0 chr2 39241950 39242001 -214014582 + (CA)n Simple_repeat Simple_repeat 2 52 0 425 221 71 26 chr2 39242625 39242779 -214013804 - L2 LINE L2 -4 3309 3149 590 268 106 98 chr2 39242796 39243307 -214013276 + LTR67 LTR ERVL 4 518 -39 933 301 125 18 chr2 39243335 39244368 -214012215 - L2 LINE L2 -168 3145 2005 333 196 52 124 chr2 39244982 39245135 -214011448 - L2 LINE L2 0 3313 3172 266 318 19 9 chr2 39246111 39246218 -214010365 - MIR SINE MIR -73 189 82 270 255 236 32 chr2 39246882 39247039 -214009544 + MIR SINE MIR 18 206 -56 327 130 0 0 chr2 39247594 39247648 -214008935 + (T)n Simple_repeat Simple_repeat 1 54 0 1844 152 28 3 chr2 39248074 39248363 -214008220 - AluSx SINE Alu -16 296 1 734 162 0 132 chr2 39248392 39248589 -214007994 + FRAM SINE Alu 1 171 -5 209 306 0 0 chr2 39248632 39248694 -214007889 + MIR SINE MIR 161 222 -40 555 332 70 23 chr2 39248705 39249091 -214007492 - L2 LINE L2 0 3313 2910 232 149 0 21 chr2 39249466 39249513 -214007070 + MIR3 SINE MIR 159 204 -4 242 192 19 0 chr2 39250499 39250551 -214006032 + MER5C DNA MER1_type 71 123 -201 295 133 50 0 chr2 39250917 39250977 -214005606 - L1ME4a LINE L1 -5 6116 6054 2382 113 0 0 chr2 39251545 39251854 -214004729 - AluSg SINE Alu -1 309 1 400 223 21 0 chr2 39251958 39252052 -214004531 + MER94 DNA DNA 39 134 0 252 366 36 25 chr2 39252055 39252334 -214004249 + L2 LINE L2 2325 2606 -708 2256 92 14 7 chr2 39253296 39253591 -214002992 - AluSx SINE Alu -15 297 1 320 259 84 7 chr2 39253593 39253736 -214002847 + Charlie7 DNA MER1_type 2452 2605 -7 276 98 0 0 chr2 39254614 39254655 -214001928 + MADE1 DNA Mariner 36 76 -4 2154 117 0 7 chr2 39256046 39256374 -214000209 + AluSx SINE Alu 2 312 0 1960 161 3 0 chr2 39256670 39256962 -213999621 - AluJb SINE Alu -19 293 1 1489 243 74 12 chr2 39257431 39257462 -213999121 + MLT2E LTR ERVL 7 35 -593 2614 184 42 22 chr2 39257462 39257891 -213998692 + MLT1D LTR MaLR 1 443 -62 1847 101 0 63 chr2 39257891 39258177 -213998406 - AluSg SINE Alu -8 302 35 2614 184 42 22 chr2 39258177 39258242 -213998341 + MLT1D LTR MaLR 443 505 0 1489 243 74 12 chr2 39258242 39258629 -213997954 + MLT2E LTR ERVL 35 451 -177 895 242 57 18 chr2 39258653 39259030 -213997553 - L1ME LINE L1 -585 5577 5188 1897 142 0 40 chr2 39259041 39259360 -213997223 + AluJb SINE Alu 1 307 0 340 189 113 125 chr2 39259394 39259583 -213997000 + L1ME3A LINE L1 5607 5794 -376 254 307 80 34 chr2 39259627 39259803 -213996780 + L1ME3A LINE L1 5978 6161 -9 265 258 51 30 chr2 39259890 39259994 -213996589 + MER5A DNA MER1_type 31 125 -53 504 308 69 12 chr2 39260936 39261183 -213995400 + MIR SINE MIR 2 262 0 384 124 29 162 chr2 39261716 39261762 -213994821 + MER34C LTR ERV1 47 73 -512 2874 117 54 5 chr2 39261762 39262172 -213994411 - MER57B LTR ERV1 -4 430 1 384 124 29 162 chr2 39262172 39262230 -213994353 + MER34C LTR ERV1 73 137 -448 980 225 64 73 chr2 39262232 39262654 -213993929 + MER34B LTR ERV1 148 565 0 402 268 84 21 chr2 39263096 39263238 -213993345 + MIR3 SINE MIR 41 191 -17 2071 142 3 0 chr2 39264638 39264948 -213991635 + AluSx SINE Alu 1 311 -1 3553 139 10 33 chr2 39265291 39265867 -213990716 + MER34B LTR ERV1 3 565 0 1826 154 64 42 chr2 39265868 39266198 -213990385 - MER1B DNA MER1_type 0 337 1 25 51 0 0 chr2 39266393 39266432 -213990151 + AT_rich Low_complexity Low_complexity 1 39 0 790 255 102 100 chr2 39268083 39268377 -213988206 + MLT1L LTR MaLR 217 615 0 1705 167 78 0 chr2 39268437 39268719 -213987864 - AluSx SINE Alu -8 304 1 622 152 9 62 chr2 39268876 39268897 -213987686 - MLT1A1 LTR MaLR 0 374 353 2377 118 48 22 chr2 39268897 39269252 -213987331 + THE1B LTR MaLR 1 364 0 622 152 9 62 chr2 39269252 39269369 -213987214 - MLT1A1 LTR MaLR -21 353 256 731 230 95 52 chr2 39269563 39270013 -213986570 - LTR1B LTR ERV1 -333 493 39 1359 167 8 17 chr2 39270022 39270261 -213986322 - MLT1A1 LTR MaLR -110 255 19 256 333 0 0 chr2 39271015 39271105 -213985478 + MLT1J LTR MaLR 111 200 -311 2456 137 118 138 chr2 39271903 39272410 -213984173 - LTR48 LTR ERV1 0 787 271 2064 146 3 0 chr2 39272410 39272719 -213983864 - AluSx SINE Alu -2 310 1 2456 137 118 138 chr2 39272719 39272875 -213983708 - LTR48 LTR ERV1 -516 271 138 2242 118 0 0 chr2 39272875 39273179 -213983404 + AluSx SINE Alu 9 312 0 2456 137 118 138 chr2 39273179 39273261 -213983322 - LTR48 LTR ERV1 -649 138 56 * 3436 117 65 11 chr2 39273260 39273801 -213982782 - LTR24B LTR ERV1 -6 570 1 436 160 0 40 chr2 39273801 39273863 -213982720 - MER39 LTR ERV1 -648 59 1 868 308 110 28 chr2 39274009 39274585 -213981998 + L2 LINE L2 2647 3299 -14 1260 164 29 5 chr2 39274869 39275077 -213981506 - MER20 DNA MER1_type -4 215 3 184 316 0 38 chr2 39275169 39275248 -213981335 - L2 LINE L2 0 3313 3238 2041 121 0 16 chr2 39275662 39275968 -213980615 + AluSq SINE Alu 1 301 -12 2046 113 41 7 chr2 39276259 39276551 -213980032 + AluSc SINE Alu 1 302 -7 431 204 28 9 chr2 39277016 39277124 -213979459 + L1MB7 LINE L1 6074 6183 -1 830 83 0 0 chr2 39277134 39277242 -213979341 + L1PA5 LINE L1 6044 6151 -3 836 140 16 75 chr2 39277249 39277435 -213979148 + L1MB8 LINE L1 5656 5830 -348 2790 122 9 9 chr2 39277438 39277871 -213978712 + L1MA2 LINE L1 5865 6297 -7 1532 147 83 15 chr2 39277874 39278161 -213978422 - AluSx SINE Alu 0 305 1 2031 154 14 14 chr2 39278180 39278536 -213978047 + L1MB8 LINE L1 5823 6178 0 313 257 208 0 chr2 39278661 39278762 -213977821 - MER5A DNA MER1_type -16 173 52 1091 184 17 60 chr2 39278767 39279000 -213977583 - AluJb SINE Alu -3 309 87 191 211 0 0 chr2 39279011 39279049 -213977534 - MER5A DNA MER1_type -148 41 4 2181 112 7 0 chr2 39279466 39279761 -213976822 - AluSp SINE Alu -16 297 1 347 339 75 9 chr2 39279998 39280343 -213976240 - L1M4 LINE L1 -1304 4842 4475 803 254 43 26 chr2 39280403 39280635 -213975948 + MIR SINE MIR 6 241 -21 387 241 35 26 chr2 39280695 39280811 -213975772 + L1MC/D LINE L1 5531 5647 -2161 914 216 77 10 chr2 39280832 39281123 -213975460 - MER90 LTR ERV1 0 614 212 271 348 61 9 chr2 39281152 39281267 -213975316 - MER90 LTR ERV1 -491 123 3 324 250 33 11 chr2 39281292 39281384 -213975199 + L1MC/D LINE L1 5706 5799 -2009 22 0 0 0 chr2 39281757 39281779 -213974804 + AT_rich Low_complexity Low_complexity 1 22 0 2301 152 36 31 chr2 39282112 39282660 -213973923 + MLT2A2 LTR ERVL 1 554 0 2255 104 0 0 chr2 39284003 39284301 -213972282 - AluSg1 SINE Alu -11 298 1 286 187 60 113 chr2 39285547 39285697 -213970886 + MIR SINE MIR 82 223 -39 316 267 142 8 chr2 39286301 39286421 -213970162 + MER5A DNA MER1_type 1 136 -53 4388 114 27 5 chr2 39286439 39287060 -213969523 - MER41B LTR ERV1 0 635 1 601 234 86 6 chr2 39287623 39287798 -213968785 + LTR37B LTR ERV1 3 191 -277 559 183 39 0 chr2 39287809 39287913 -213968670 + MER20 DNA MER1_type 112 219 0 475 254 163 29 chr2 39290708 39290917 -213965666 + MIR SINE MIR 16 252 -10 231 193 211 0 chr2 39292388 39292445 -213964138 - L2 LINE L2 -14 3299 3231 1994 141 7 0 chr2 39292745 39293043 -213963540 - AluSx SINE Alu -12 300 1 2162 72 31 7 chr2 39293369 39293660 -213962923 - AluSx SINE Alu -14 298 1 21 82 0 0 chr2 39294225 39294274 -213962309 + GC_rich Low_complexity Low_complexity 1 49 0 26 30 0 0 chr2 39294941 39294974 -213961609 + AT_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr2 39295280 39295302 -213961281 + AT_rich Low_complexity Low_complexity 1 22 0 1647 162 32 0 chr2 39295651 39295935 -213960648 + AluJo SINE Alu 1 293 -19 374 207 69 11 chr2 39296305 39296392 -213960191 + MIR SINE MIR 71 162 -100 1075 244 46 37 chr2 39297479 39297827 -213958756 + L2 LINE L2 1347 1697 -1617 798 179 114 46 chr2 39297867 39298147 -213958436 - L1MEc LINE L1 -4182 2214 1916 971 154 5 77 chr2 39299056 39299264 -213957319 + MER3 DNA MER1_type 6 198 -11 260 26 0 26 chr2 39301037 39301075 -213955508 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 9776 21 3 216 chr2 39301075 39302809 -213953774 - SVA Other Other -20 1366 3 24 0 0 0 chr2 39302861 39302885 -213953698 + AT_rich Low_complexity Low_complexity 1 24 0 183 49 73 0 chr2 39303523 39303564 -213953019 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 314 281 94 35 chr2 39304688 39304891 -213951692 - L1ME3 LINE L1 -224 5938 5724 20550 108 12 46 chr2 39304896 39311350 -213945233 - L1PA7 LINE L1 0 6154 9 440 293 104 15 chr2 39311371 39311712 -213944871 - L1ME3 LINE L1 -451 5719 5347 317 219 171 0 chr2 39311756 39311838 -213944745 - L2 LINE L2 -2 3311 3216 354 275 118 45 chr2 39312357 39312535 -213944048 + MIR SINE MIR 8 198 -64 942 165 104 0 chr2 39313344 39313508 -213943075 - MER58A DNA MER1_type -43 181 1 347 322 39 81 chr2 39313555 39313912 -213942671 - L2 LINE L2 -1358 1956 1615 337 230 150 35 chr2 39314266 39314379 -213942204 - L2 LINE L2 0 3313 3188 255 250 31 0 chr2 39314680 39314744 -213941839 - MIR SINE MIR -36 226 161 342 182 15 121 chr2 39315051 39315183 -213941400 + MER104 DNA Tc2 1 118 -62 223 267 0 100 chr2 39315474 39315564 -213941019 + L2 LINE L2 3232 3312 -1 236 366 73 49 chr2 39315569 39315856 -213940727 - L2 LINE L2 -1979 1335 1042 26 30 0 0 chr2 39316020 39316053 -213940530 + AT_rich Low_complexity Low_complexity 1 33 0 1487 153 54 0 chr2 39316053 39316314 -213940269 - L1PB4 LINE L1 -2 6154 5880 753 224 0 33 chr2 39317079 39317265 -213939318 + MER5A DNA MER1_type 5 183 -6 1708 249 27 27 chr2 39318148 39318594 -213937989 + LTR40c LTR ERVL 8 453 -12 25 51 0 0 chr2 39321878 39321917 -213934666 + AT_rich Low_complexity Low_complexity 1 39 0 9016 197 26 17 chr2 39322188 39324481 -213932102 - L1MB3 LINE L1 -27 6392 4061 2795 70 3 3 chr2 39324481 39324836 -213931747 + THE1A LTR MaLR 1 355 0 9016 197 26 17 chr2 39324836 39325642 -213930941 - L1MB3 LINE L1 -2358 4061 3264 29982 108 11 30 chr2 39325650 39332159 -213924424 - L1PA7 LINE L1 0 6469 2 6509 75 13 23 chr2 39332311 39333241 -213923342 - SVA Other Other -1 1385 465 4598 208 72 47 chr2 39333279 39335133 -213921450 - L1MB3 LINE L1 -3101 3281 1368 2345 82 14 0 chr2 39335133 39335425 -213921158 + AluY SINE Alu 1 296 -15 4598 208 72 47 chr2 39335425 39335736 -213920847 - L1MB3 LINE L1 -5014 1368 1066 8322 119 16 12 chr2 39335741 39337034 -213919549 + HSMAR2 DNA Mariner 5 1301 -1 2183 101 13 7 chr2 39337152 39337459 -213919124 + AluSx SINE Alu 1 309 -3 867 271 130 16 chr2 39338104 39338780 -213917803 - L1M4 LINE L1 -1363 4783 4031 230 185 33 22 chr2 39338841 39338933 -213917650 + CT-rich Low_complexity Low_complexity 1 93 0 1459 191 65 0 chr2 39338947 39339209 -213917374 - AluJb SINE Alu -33 279 1 452 312 40 15 chr2 39339346 39339639 -213916944 - L1M4 LINE L1 -2309 3837 3530 229 224 86 0 chr2 39339816 39339874 -213916709 - L1MB7 LINE L1 -37 6147 6085 * 1989 189 30 61 chr2 39339848 39340437 -213916146 - L1MB7 LINE L1 -817 5329 4787 1590 288 68 10 chr2 39340446 39341276 -213915307 - L1M4 LINE L1 -1065 5081 4204 2277 249 54 11 chr2 39341276 39341904 -213914679 - L2 LINE L2 -275 3038 2386 1128 274 98 30 chr2 39342389 39342990 -213913593 - L2 LINE L2 -2 3311 2679 31 0 0 0 chr2 39343345 39343376 -213913207 + AT_rich Low_complexity Low_complexity 1 31 0 29 60 0 0 chr2 39343468 39343518 -213913065 + AT_rich Low_complexity Low_complexity 1 50 0 233 29 29 0 chr2 39343632 39343666 -213912917 + (TAAAA)n Simple_repeat Simple_repeat 1 35 0 2687 53 18 0 chr2 39344362 39344703 -213911880 + L1PA7 LINE L1 5804 6150 -4 308 192 0 125 chr2 39345096 39345216 -213911367 + L1MC5 LINE L1 7809 7913 -48 9877 58 11 102 chr2 39345833 39347345 -213909238 - SVA Other Other 0 1386 12 190 381 71 32 chr2 39347362 39347488 -213909095 - L2 LINE L2 -25 3247 3117 587 170 0 2 chr2 39347537 39347771 -213908812 + AluJo SINE Alu 1 282 -30 351 0 0 0 chr2 39347771 39347810 -213908773 + (TAGA)n Simple_repeat Simple_repeat 2 40 0 23 0 0 0 chr2 39349069 39349092 -213907491 + AT_rich Low_complexity Low_complexity 1 23 0 2284 109 0 0 chr2 39349295 39349597 -213906986 - AluSx SINE Alu -10 302 1 631 277 41 62 chr2 39349707 39349949 -213906634 + L2 LINE L2 3031 3267 -5 737 190 50 17 chr2 39350025 39350204 -213906379 - MER5A DNA MER1_type -1 188 4 38 61 0 0 chr2 39350874 39350940 -213905643 + AT_rich Low_complexity Low_complexity 1 66 0 185 200 11 44 chr2 39352007 39352097 -213904486 + CT-rich Low_complexity Low_complexity 2 88 0 21 0 0 0 chr2 39352522 39352543 -213904040 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 39352712 39352737 -213903846 + AT_rich Low_complexity Low_complexity 1 25 0 677 165 253 0 chr2 39352843 39353013 -213903570 + MER58A DNA MER1_type 9 221 -3 22 35 0 0 chr2 39353840 39353869 -213902714 + AT_rich Low_complexity Low_complexity 1 29 0 207 0 0 0 chr2 39354372 39354395 -213902188 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 784 300 116 16 chr2 39354400 39354787 -213901796 + L3 LINE CR1 399 824 -753 634 148 25 169 chr2 39354821 39355058 -213901525 + L1MC3 LINE L1 7562 7764 -21 2990 238 47 57 chr2 39355255 39356273 -213900310 + L1M4 LINE L1 3446 4453 -1693 3031 157 10 34 chr2 39356291 39356770 -213899813 + L1MC1 LINE L1 5751 6215 -118 2149 129 0 0 chr2 39356770 39357064 -213899519 + AluSx SINE Alu 1 294 -18 3031 157 10 34 chr2 39357064 39357175 -213899408 + L1MC1 LINE L1 6215 6327 -6 435 256 56 0 chr2 39358237 39358362 -213898221 - MIR SINE MIR -10 252 121 21 36 0 0 chr2 39358663 39358691 -213897892 + AT_rich Low_complexity Low_complexity 1 28 0 2233 76 23 23 chr2 39358855 39359156 -213897427 + AluY SINE Alu 1 301 -10 2446 91 0 0 chr2 39359230 39359537 -213897046 + AluSx SINE Alu 1 307 -5 46 92 0 0 chr2 39360411 39360541 -213896042 + AT_rich Low_complexity Low_complexity 1 130 0 525 339 42 17 chr2 39361037 39361273 -213895310 - MIR SINE MIR -14 248 7 457 185 17 101 chr2 39361831 39361900 -213894683 - MIR SINE MIR -152 110 54 2102 116 6 31 chr2 39361900 39362218 -213894365 - AluSx SINE Alu -2 310 1 457 185 17 101 chr2 39362218 39362267 -213894316 - MIR SINE MIR -208 54 2 180 242 0 0 chr2 39362823 39362856 -213893727 - L2 LINE L2 -865 2449 2417 566 331 19 19 chr2 39362898 39363267 -213893316 + L1ME3A LINE L1 489 857 -5262 766 234 85 17 chr2 39363540 39363846 -213892737 + L1ME1 LINE L1 5342 5712 -472 1261 200 83 3 chr2 39363853 39364153 -213892430 + L1ME1 LINE L1 5838 6161 -5 257 208 38 0 chr2 39364261 39364314 -213892269 + Tigger7 DNA MER2_type 2427 2481 -6 396 0 0 0 chr2 39364316 39364360 -213892223 + (CTA)n Simple_repeat Simple_repeat 3 46 0 510 316 76 16 chr2 39364373 39364823 -213891760 + L1ME3A LINE L1 2337 2813 -3316 255 332 43 28 chr2 39364822 39365033 -213891550 + L1ME3A LINE L1 5393 5606 -539 * 364 286 45 19 chr2 39365079 39365233 -213891350 + L1ME3A LINE L1 5777 5934 -219 1832 168 13 25 chr2 39365296 39365612 -213890971 + AluJo SINE Alu 1 312 0 231 267 27 0 chr2 39366251 39366336 -213890247 + (TA)n Simple_repeat Simple_repeat 1 87 0 1781 161 11 7 chr2 39367238 39367524 -213889059 + AluJo SINE Alu 1 287 -25 960 240 59 2 chr2 39368160 39368397 -213888186 + MIR SINE MIR 2 248 -14 447 324 56 44 chr2 39368813 39369063 -213887520 + MIR SINE MIR 10 262 0 434 248 20 0 chr2 39369227 39369328 -213887255 + MER5B DNA MER1_type 1 103 -75 2236 189 42 36 chr2 39369332 39369881 -213886702 - L1ME1 LINE L1 -9 6157 5606 189 159 29 145 chr2 39369895 39369964 -213886619 + MER5B DNA MER1_type 118 178 0 359 282 78 10 chr2 39370163 39370266 -213886317 - L2 LINE L2 -4 3309 3200 413 306 62 12 chr2 39371206 39371464 -213885119 + L1ME4a LINE L1 5597 5867 -254 232 175 70 0 chr2 39371537 39371594 -213884989 - L1MA9 LINE L1 0 6312 6252 2103 102 4 0 chr2 39372264 39372538 -213884045 + AluSq SINE Alu 1 275 -38 600 101 0 0 chr2 39372540 39372629 -213883954 + (TAGA)n Simple_repeat Simple_repeat 3 91 0 2043 111 55 3 chr2 39373332 39373675 -213882908 - L1MA9 LINE L1 -3 6309 5949 41409 45 1 2 chr2 39373689 39379852 -213876731 - L1PA4 LINE L1 -2 6153 2 506 307 118 64 chr2 39380852 39381440 -213875143 + L2 LINE L2 2600 3267 -5 2249 81 0 17 chr2 39382918 39383216 -213873367 + AluSp SINE Alu 1 293 -20 22 35 0 0 chr2 39383456 39383485 -213873098 + AT_rich Low_complexity Low_complexity 1 29 0 288 333 46 0 chr2 39383767 39383854 -213872729 - L2 LINE L2 -46 3226 3136 2391 97 0 0 chr2 39384278 39384586 -213871997 + AluSc SINE Alu 1 308 -1 27 29 0 0 chr2 39385973 39386007 -213870576 + AT_rich Low_complexity Low_complexity 1 34 0 21 36 0 0 chr2 39386499 39386527 -213870056 + AT_rich Low_complexity Low_complexity 1 28 0 507 319 151 54 chr2 39386624 39386745 -213869838 + L1ME4a LINE L1 5327 5435 -686 2762 133 11 5 chr2 39386745 39387190 -213869393 - LTR7 LTR ERV1 -2 448 1 507 319 151 54 chr2 39387190 39387696 -213868887 + L1ME4a LINE L1 5435 6015 -106 201 147 0 0 chr2 39387868 39387902 -213868681 + (CA)n Simple_repeat Simple_repeat 1 34 0 1454 146 43 47 chr2 39388682 39388935 -213867648 + AluJb SINE Alu 38 289 -23 31 0 0 0 chr2 39388935 39388966 -213867617 + AT_rich Low_complexity Low_complexity 1 31 0 291 197 0 15 chr2 39388983 39389049 -213867534 - LTR37A LTR ERV1 -319 107 43 2001 79 7 10 chr2 39389052 39389342 -213867241 - MER1A DNA MER1_type 0 529 241 3946 113 141 35 chr2 39389350 39390352 -213866231 + pTR5 LTR ERV1 769 2024 -414 231 287 53 0 chr2 39390353 39390447 -213866136 + LTR30 LTR ERV1 544 642 -80 1512 82 0 5 chr2 39390450 39390670 -213865913 + pTR5 LTR ERV1 172 390 -2048 1161 181 39 51 chr2 39390670 39390924 -213865659 - MER1A DNA MER1_type -276 251 1 266 316 89 36 chr2 39390953 39391121 -213865462 - MIR SINE MIR -73 189 13 224 333 107 19 chr2 39391808 39391967 -213864616 - MIR3 SINE MIR -25 183 11 450 258 131 30 chr2 39392056 39392254 -213864329 - MIR SINE MIR -43 219 2 259 224 19 65 chr2 39392297 39392404 -213864179 + GA-rich Low_complexity Low_complexity 1 102 0 3207 235 23 18 chr2 39392773 39393632 -213862951 - L1ME1 LINE L1 -7 6228 5365 6210 219 65 39 chr2 39393768 39395600 -213860983 - L1ME1 LINE L1 -1234 4981 3081 1192 53 13 0 chr2 39395600 39395750 -213860833 - L1PA7 LINE L1 -2 6152 6001 6210 219 65 39 chr2 39395750 39396097 -213860486 - L1ME1 LINE L1 -3134 3081 2745 751 275 17 8 chr2 39396131 39396371 -213860212 - L1ME1 LINE L1 -6057 339 98 1483 209 69 12 chr2 39397126 39397548 -213859035 - MER69 DNA AcHobo 0 2526 2081 184 294 110 29 chr2 39398201 39398337 -213858246 + L2 LINE L2 2867 3013 -300 213 309 175 8 chr2 39398424 39398550 -213858033 + L2 LINE L2 3158 3304 -9 224 333 0 12 chr2 39398657 39398738 -213857845 + G-rich Low_complexity Low_complexity 1 80 0 2133 146 14 27 chr2 39398764 39399133 -213857450 - THE1B LTR MaLR 0 364 1 214 328 115 0 chr2 39399706 39399828 -213856755 - MIR3 SINE MIR -61 147 12 1170 112 12 0 chr2 39400250 39400411 -213856172 - FAM SINE Alu -2 47 1 2615 220 46 45 chr2 39401085 39401551 -213855032 - L1ME1 LINE L1 -5 6579 6110 2270 90 3 10 chr2 39401551 39401852 -213854731 + AluSx SINE Alu 1 299 -13 2615 220 46 45 chr2 39401852 39402185 -213854398 - L1ME1 LINE L1 -474 6110 5779 203 307 57 0 chr2 39402735 39402823 -213853760 + L2 LINE L2 2296 2388 -926 29 0 0 0 chr2 39403599 39403628 -213852955 + AT_rich Low_complexity Low_complexity 1 29 0 34 0 0 0 chr2 39403696 39403730 -213852853 + AT_rich Low_complexity Low_complexity 1 34 0 566 319 136 37 chr2 39403920 39404620 -213851963 + L1 LINE L1 4073 4841 -1305 528 256 83 11 chr2 39406045 39406247 -213850336 + MIR SINE MIR 3 218 -44 281 309 73 0 chr2 39406817 39406927 -213849656 - MIR SINE MIR -115 147 30 260 278 0 28 chr2 39407624 39407696 -213848887 + L2 LINE L2 3194 3263 -9 423 0 0 0 chr2 39408041 39408088 -213848495 + (CA)n Simple_repeat Simple_repeat 2 48 0 550 270 0 8 chr2 39408203 39408329 -213848254 - MIR SINE MIR -112 150 26 6961 207 60 60 chr2 39408928 39409039 -213847544 - L1ME1 LINE L1 -1084 5480 5370 351 0 0 0 chr2 39409039 39409078 -213847505 + (TTA)n Simple_repeat Simple_repeat 2 40 0 6961 207 60 60 chr2 39409078 39409282 -213847301 - L1ME1 LINE L1 -1194 5370 5167 1963 174 40 0 chr2 39409282 39409633 -213846950 + MLT1A1 LTR MaLR 1 365 0 6961 207 60 60 chr2 39409633 39410123 -213846460 - L1ME1 LINE L1 -1397 5167 4678 206 239 211 28 chr2 39410123 39410232 -213846351 + MIR SINE MIR 103 231 -31 6961 207 60 60 chr2 39410232 39411397 -213845186 - L1ME1 LINE L1 -1886 4678 3514 442 0 35 0 chr2 39411397 39411455 -213845128 + (CA)n Simple_repeat Simple_repeat 1 60 0 6961 207 60 60 chr2 39411455 39413855 -213842728 - L1ME1 LINE L1 -3050 3514 1037 486 246 39 109 chr2 39414498 39414782 -213841801 + L1M4b LINE L1 12 275 -6584 592 280 51 100 chr2 39414914 39415325 -213841258 + L1M4b LINE L1 798 1188 -5667 24 0 0 0 chr2 39415372 39415396 -213841187 + AT_rich Low_complexity Low_complexity 1 24 0 1144 277 30 60 chr2 39415417 39415696 -213840887 + L1M4b LINE L1 1861 2116 -4843 2272 98 0 0 chr2 39415696 39415992 -213840591 + AluSg SINE Alu 1 296 -14 1144 277 30 60 chr2 39415992 39416275 -213840308 + L1M4b LINE L1 2116 2406 -4553 947 235 29 5 chr2 39416285 39416538 -213840045 + L1ME1 LINE L1 5664 5929 -254 529 214 42 30 chr2 39416524 39416692 -213839891 - L1M4 LINE L1 -1598 4548 4379 * 198 367 13 0 chr2 39417921 39418000 -213838583 - L2 LINE L2 -6 3266 3187 1764 149 14 11 chr2 39418567 39418843 -213837740 - AluJo SINE Alu -16 296 20 413 239 66 46 chr2 39418940 39419137 -213837446 - MIR SINE MIR -15 247 47 286 289 30 50 chr2 39419216 39419417 -213837166 + L2 LINE L2 1570 1766 -1548 1641 152 0 15 chr2 39419746 39420010 -213836573 - AluSx SINE Alu -6 306 47 6388 122 27 12 chr2 39420386 39421610 -213834973 - L1MA4A LINE L1 0 6303 5061 706 208 34 39 chr2 39422721 39422899 -213833684 - MER5B DNA MER1_type 0 178 2 22 56 0 0 chr2 39423197 39423233 -213833350 + AT_rich Low_complexity Low_complexity 1 36 0 1221 270 91 40 chr2 39424397 39424978 -213831605 - MLT1L LTR MaLR -4 611 1 180 77 0 0 chr2 39424991 39425017 -213831566 + (CA)n Simple_repeat Simple_repeat 2 27 0 252 212 12 59 chr2 39425081 39425166 -213831417 - L2 LINE L2 -3 3269 3189 212 292 62 0 chr2 39425230 39425295 -213831288 + L2 LINE L2 2986 3054 -218 1803 189 21 9 chr2 39426180 39426514 -213830069 - MER58B DNA MER1_type -3 338 1 2665 123 41 7 chr2 39426587 39427001 -213829582 + MSTA LTR MaLR 1 428 0 1204 179 5 0 chr2 39428067 39428274 -213828309 + MER3 DNA MER1_type 2 209 0 2044 112 54 3 chr2 39428879 39429055 -213827528 - AluSc SINE Alu 0 309 111 554 0 15 0 chr2 39429055 39429121 -213827462 + (TTTTA)n Simple_repeat Simple_repeat 1 67 0 2044 112 54 3 chr2 39429121 39429238 -213827345 - AluSc SINE Alu -198 111 1 194 210 32 32 chr2 39430135 39430197 -213826386 - L2 LINE L2 -212 3060 2999 245 95 0 24 chr2 39430618 39430660 -213825923 + (CA)n Simple_repeat Simple_repeat 1 41 0 437 243 27 9 chr2 39430705 39430816 -213825767 + L2 LINE L2 3188 3300 -13 1950 219 105 10 chr2 39431125 39431619 -213824964 - L1MD2 LINE L1 -226 6133 5593 * 6697 33 0 0 chr2 39431613 39432391 -213824192 - L1PA4 LINE L1 -3 6152 5375 3158 19 0 0 chr2 39432389 39432757 -213823826 + L1PA4 LINE L1 4985 5352 -794 * 569 144 65 105 chr2 39432759 39432912 -213823671 - L1MD2 LINE L1 -607 5559 5413 21 0 0 0 chr2 39432917 39432938 -213823645 + AT_rich Low_complexity Low_complexity 1 21 0 207 69 0 0 chr2 39432964 39432993 -213823590 + (TG)n Simple_repeat Simple_repeat 2 30 0 247 266 51 13 chr2 39433036 39433115 -213823468 - MER112 DNA MER1_type -178 82 1 2131 129 27 0 chr2 39433211 39433506 -213823077 + AluSg SINE Alu 1 303 -7 362 339 58 18 chr2 39433824 39434154 -213822429 + L1ME LINE L1 5469 5811 -351 21 0 0 0 chr2 39434360 39434381 -213822202 + AT_rich Low_complexity Low_complexity 1 21 0 1205 198 34 23 chr2 39440604 39440867 -213815716 - ORSL DNA AcHobo -1 274 9 653 203 0 0 chr2 39441235 39441353 -213815230 + FLAM_A SINE Alu 1 118 -15 28 0 0 0 chr2 39441366 39441394 -213815189 + AT_rich Low_complexity Low_complexity 1 28 0 740 164 20 108 chr2 39441650 39441845 -213814738 - MER58A DNA MER1_type 0 224 47 365 181 42 0 chr2 39442420 39442492 -213814091 + MER53 DNA DNA 15 89 -100 * 366 205 13 0 chr2 39442429 39442507 -213814076 - MER53 DNA DNA -16 173 95 22 0 0 0 chr2 39443511 39443533 -213813050 + GC_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr2 39445210 39445242 -213811341 + GC_rich Low_complexity Low_complexity 1 32 0 414 296 16 0 chr2 39446583 39446708 -213809875 - MIR SINE MIR -104 158 32 2139 96 6 38 chr2 39446799 39447113 -213809470 + AluSx SINE Alu 1 304 -8 2270 89 30 7 chr2 39447386 39447689 -213808894 - AluSx SINE Alu -2 310 1 591 143 71 29 chr2 39449614 39449754 -213806829 - MER104 DNA Tc2 -3 177 32 2687 78 120 0 chr2 39449794 39450194 -213806389 - LTR7 LTR ERV1 -2 448 1 2413 95 50 13 chr2 39450194 39450572 -213806011 - HERVH LTR ERV1 0 7713 7322 1399 134 18 5 chr2 39450570 39450787 -213805796 - HERVH LTR ERV1 -1894 5819 5600 * 4552 136 1 1 chr2 39450788 39451450 -213805133 - HERVH LTR ERV1 -2564 5149 4488 3589 89 4 6 chr2 39451452 39451955 -213804628 - HERVH LTR ERV1 -3720 3993 3492 888 149 20 0 chr2 39451945 39452093 -213804490 - HERVH LTR ERV1 -4423 3290 3140 * 20637 92 14 25 chr2 39452087 39455105 -213801478 - HERVH LTR ERV1 -4726 2987 1 2653 85 126 0 chr2 39455107 39455505 -213801078 - LTR7 LTR ERV1 -2 448 1 560 176 101 91 chr2 39455880 39456079 -213800504 + L1MC4 LINE L1 7842 8042 0 241 323 10 35 chr2 39456556 39456740 -213799843 + CT-rich Low_complexity Low_complexity 1 179 0 2155 118 14 0 chr2 39457119 39457416 -213799167 - AluSx SINE Alu -11 301 1 975 114 0 0 chr2 39457737 39457903 -213798680 + (TC)n Simple_repeat Simple_repeat 1 166 0 514 306 155 57 chr2 39458202 39458796 -213797787 - L3 LINE CR1 -174 1403 752 1899 132 11 7 chr2 39459208 39459516 -213797067 - AluJb SINE Alu 0 309 1 655 286 39 20 chr2 39460162 39460417 -213796166 + MIR SINE MIR 2 261 -1 561 286 40 52 chr2 39460625 39460877 -213795706 + MIR SINE MIR 13 261 -1 803 84 0 0 chr2 39462035 39462142 -213794441 - FLAM_A SINE Alu -3 139 33 450 330 24 15 chr2 39462344 39462550 -213794033 - MIR SINE MIR -29 233 26 1649 195 133 25 chr2 39463082 39463554 -213793029 - Charlie1b DNA MER1_type 0 523 1 2508 47 0 3 chr2 39463579 39463877 -213792706 + AluY SINE Alu 1 297 -14 363 23 0 0 chr2 39463887 39463931 -213792652 + (TG)n Simple_repeat Simple_repeat 1 44 0 481 305 38 30 chr2 39464447 39464683 -213791900 - MIR SINE MIR -2 260 23 613 267 37 0 chr2 39466044 39466205 -213790378 + MIR3 SINE MIR 30 196 -12 26 30 0 0 chr2 39466232 39466265 -213790318 + AT_rich Low_complexity Low_complexity 1 33 0 300 27 0 0 chr2 39468568 39468605 -213787978 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 257 0 0 29 chr2 39469022 39469056 -213787527 + (GAAA)n Simple_repeat Simple_repeat 2 34 0 201 108 0 0 chr2 39469175 39469212 -213787371 + (T)n Simple_repeat Simple_repeat 1 37 0 341 354 133 19 chr2 39469463 39469875 -213786708 + L2 LINE L2 2855 3313 0 233 328 72 65 chr2 39470049 39470342 -213786241 - L2 LINE L2 -1812 1502 1208 717 260 82 27 chr2 39470415 39470781 -213785802 + L1ME4a LINE L1 5615 6000 -121 4696 164 30 3 chr2 39470871 39471735 -213784848 - L1PA13 LINE L1 -992 5154 4268 6390 102 11 0 chr2 39471735 39472750 -213783833 + L1PA13 LINE L1 5141 6163 0 366 295 31 106 chr2 39473068 39473140 -213783443 - MIR SINE MIR -6 256 180 2454 81 3 0 chr2 39473140 39473449 -213783134 + AluY SINE Alu 1 310 -1 366 295 31 106 chr2 39473449 39473603 -213782980 - MIR SINE MIR -82 180 47 1812 183 86 3 chr2 39474326 39474686 -213781897 + MLT1B LTR MaLR 1 390 0 720 247 172 62 chr2 39474690 39475063 -213781520 - LTR16A LTR ERVL -12 438 25 3113 145 48 43 chr2 39476167 39476375 -213780208 + LTR9 LTR ERV1 3 208 -404 2326 85 6 38 chr2 39476375 39476414 -213780169 - AluSg SINE Alu -1 309 270 180 77 0 0 chr2 39476414 39476440 -213780143 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2326 85 6 38 chr2 39476440 39476719 -213779864 - AluSg SINE Alu -40 270 1 3113 145 48 43 chr2 39476719 39477117 -213779466 + LTR9 LTR ERV1 208 612 0 303 234 173 30 chr2 39477544 39477741 -213778842 + L1ME4a LINE L1 5892 6116 -5 1683 170 133 3 chr2 39477804 39478128 -213778455 - MER47A DNA MER2_type 0 366 1 189 0 0 0 chr2 39480177 39480198 -213776385 + (TTTTC)n Simple_repeat Simple_repeat 5 25 0 7699 91 19 0 chr2 39480201 39482039 -213774544 - L1PA8 LINE L1 -14 6158 4293 414 339 24 6 chr2 39482375 39482543 -213774040 + MIR3 SINE MIR 31 201 -7 1518 155 40 65 chr2 39483833 39484155 -213772428 + L1MB2 LINE L1 5857 6170 -1 363 227 31 21 chr2 39485811 39485908 -213770675 + MIR3 SINE MIR 108 205 -3 652 287 203 20 chr2 39486201 39486644 -213769939 - MLT1L LTR MaLR -85 530 7 869 252 150 23 chr2 39486787 39487228 -213769355 + L1ME4a LINE L1 5584 6080 -41 2554 62 0 7 chr2 39487688 39487997 -213768586 + AluY SINE Alu 1 307 -4 2314 84 3 13 chr2 39488131 39488439 -213768144 + AluSq SINE Alu 9 313 0 351 0 0 0 chr2 39489213 39489252 -213767331 + (CA)n Simple_repeat Simple_repeat 1 39 0 339 318 53 0 chr2 39489306 39489438 -213767145 + L3 LINE CR1 998 1136 -441 321 250 86 35 chr2 39489459 39489575 -213767008 + L2 LINE L2 3151 3272 0 393 351 22 0 chr2 39489586 39489771 -213766812 + L3 LINE CR1 1170 1358 -219 188 314 139 58 chr2 39489905 39490042 -213766541 - L2 LINE L2 -4 3268 3121 647 159 143 0 chr2 39490565 39490691 -213765892 + L1MB7 LINE L1 6041 6184 0 223 258 142 42 chr2 39491003 39491123 -213765460 + MIR3 SINE MIR 34 165 -43 192 247 0 68 chr2 39491187 39491260 -213765323 - MIR SINE MIR -77 185 118 472 254 7 29 chr2 39491909 39492047 -213764536 + MIR3 SINE MIR 65 199 -9 257 250 146 10 chr2 39492296 39492392 -213764191 + MIR SINE MIR 1 109 -153 205 323 21 0 chr2 39492649 39492742 -213763841 + GA-rich Low_complexity Low_complexity 4 98 0 593 272 46 6 chr2 39493125 39493298 -213763285 + MIR SINE MIR 21 200 -62 2259 119 0 6 chr2 39493323 39493634 -213762949 - AluSx SINE Alu -3 309 1 302 271 220 11 chr2 39494116 39494293 -213762290 - MIR SINE MIR -32 230 17 2161 120 113 8 chr2 39495384 39495766 -213760817 + MSTA LTR MaLR 4 425 -3 9262 141 30 27 chr2 39495771 39497344 -213759239 + MSTA-int LTR MaLR 3 1580 0 1580 164 212 8 chr2 39497344 39497698 -213758885 + MSTA LTR MaLR 1 426 -2 1261 165 19 0 chr2 39499580 39499786 -213756797 - MER6B DNA MER2_type 0 210 1 484 234 66 7 chr2 39500745 39500882 -213755701 - MER58B DNA MER1_type 0 341 197 44579 39 4 9 chr2 39501400 39507585 -213748998 - L1PA4 LINE L1 0 6155 1 293 298 24 0 chr2 39509676 39509799 -213746784 + MIR SINE MIR 16 141 -67 603 323 68 53 chr2 39510306 39511124 -213745459 - HAL1b LINE L1 -514 834 4 1038 260 70 54 chr2 39512184 39512772 -213743811 - L1MEc LINE L1 -5017 1379 783 616 320 92 73 chr2 39512772 39513539 -213743044 + L2 LINE L2 1997 2805 -508 216 97 0 0 chr2 39513539 39513570 -213743013 + (CA)n Simple_repeat Simple_repeat 2 32 0 616 320 92 73 chr2 39513570 39514089 -213742494 + L2 LINE L2 2805 3313 0 234 0 0 0 chr2 39515060 39515086 -213741497 + (T)n Simple_repeat Simple_repeat 1 26 0 601 279 249 13 chr2 39516010 39516404 -213740179 + L2 LINE L2 2811 3297 -16 769 132 0 0 chr2 39516407 39516513 -213740070 + U6 snRNA snRNA 1 106 -1 4555 159 4 12 chr2 39516514 39517264 -213739319 + L1PA16 LINE L1 5414 6157 -9 231 148 19 56 chr2 39517315 39517369 -213739214 + GA-rich Low_complexity Low_complexity 4 55 0 1050 144 19 30 chr2 39518793 39519033 -213737550 + LTR54 LTR ERV1 192 488 -22 4661 140 35 0 chr2 39519033 39519516 -213737067 - L1MA4A LINE L1 -12 6291 5773 315 0 0 0 chr2 39519516 39519551 -213737032 + (TG)n Simple_repeat Simple_repeat 2 36 0 4661 140 35 0 chr2 39519551 39519781 -213736802 - L1MA4A LINE L1 -530 5773 5553 4259 148 51 14 chr2 39519781 39520580 -213736003 + L1 LINE L1 4275 5103 -1043 367 111 0 32 chr2 39520580 39520643 -213735940 + LTR54 LTR ERV1 450 510 0 1755 251 101 10 chr2 39520739 39521257 -213735326 - MLT1G LTR MaLR -61 529 2 1898 270 200 32 chr2 39521566 39521596 -213734987 - L2 LINE L2 -3 3310 3286 3158 223 40 8 chr2 39521596 39522229 -213734354 - MER82 DNA MER2_type 0 653 1 1898 270 200 32 chr2 39522229 39523391 -213733192 - L2 LINE L2 -27 3286 1937 870 249 0 0 chr2 39523391 39523556 -213733027 + MER63A DNA MER1_type 41 205 -5 297 240 107 60 chr2 39524809 39524959 -213731624 - MIR SINE MIR -93 169 13 1821 191 39 56 chr2 39524989 39525455 -213731128 + MLT1C LTR MaLR 9 466 -1 3603 137 31 36 chr2 39526474 39527088 -213729495 + LTR36 LTR ERV1 1 611 0 2184 106 3 0 chr2 39530958 39531261 -213725322 + AluSg1 SINE Alu 1 304 -5 217 323 0 0 chr2 39531391 39531456 -213725127 + MIR3 SINE MIR 138 202 -6 180 316 153 0 chr2 39532500 39532598 -213723985 - L2 LINE L2 0 3272 3160 588 90 0 0 chr2 39532669 39532747 -213723836 - MADE1 DNA Mariner 0 80 3 2584 140 3 3 chr2 39533113 39533477 -213723106 + THE1B LTR MaLR 1 364 0 312 91 0 0 chr2 39533571 39533615 -213722968 + (TA)n Simple_repeat Simple_repeat 1 44 0 348 304 159 28 chr2 39533989 39534278 -213722305 + L2 LINE L2 2896 3222 -50 956 177 29 6 chr2 39534278 39534453 -213722130 + MER20 DNA MER1_type 20 198 -21 418 299 42 14 chr2 39534753 39534897 -213721686 - MIR3 SINE MIR -5 203 56 326 240 89 75 chr2 39535211 39535357 -213721226 - MER20B DNA MER1_type -620 163 16 385 293 140 19 chr2 39535468 39535625 -213720958 + MER5A DNA MER1_type 14 189 0 416 327 85 12 chr2 39535631 39535796 -213720787 - MER5B DNA MER1_type 0 178 2 706 188 104 0 chr2 39535875 39536029 -213720554 + MER5B DNA MER1_type 6 175 -3 1991 116 31 10 chr2 39536679 39536971 -213719612 + AluSg SINE Alu 1 298 -12 215 311 179 37 chr2 39537739 39537929 -213718654 - MIR SINE MIR -44 218 2 272 148 16 0 chr2 39538376 39538437 -213718146 + (TA)n Simple_repeat Simple_repeat 2 63 0 682 170 89 0 chr2 39538448 39538583 -213718000 - MLT2B2 LTR ERVL -41 474 328 370 218 59 0 chr2 39538599 39538700 -213717883 + MLT1K LTR MaLR 456 562 -26 292 323 66 24 chr2 39539891 39540057 -213716526 + MIR SINE MIR 23 187 -67 196 351 26 0 chr2 39540850 39540927 -213715656 + L3b LINE CR1 1383 1461 -122 1811 157 3 10 chr2 39541349 39541642 -213714941 - AluJb SINE Alu -21 291 1 538 245 48 65 chr2 39541680 39541990 -213714593 + L1MC5 LINE L1 7609 7913 -48 1777 133 83 0 chr2 39542065 39542343 -213714240 + AluSx SINE Alu 1 301 -11 21 36 0 0 chr2 39542408 39542436 -213714147 + AT_rich Low_complexity Low_complexity 1 28 0 3236 147 4 0 chr2 39543021 39543511 -213713072 + L1MA9 LINE L1 5818 6309 -3 560 253 149 0 chr2 39544483 39544657 -213711926 - MIR SINE MIR -55 207 8 236 406 30 10 chr2 39544819 39545021 -213711562 - L2 LINE L2 -884 2430 2225 647 203 42 0 chr2 39545289 39545407 -213711176 - FLAM_A SINE Alu -10 123 1 274 161 136 86 chr2 39546187 39546268 -213710315 - L2 LINE L2 -7 3306 3222 1061 219 148 26 chr2 39546496 39546875 -213709708 - L1ME3A LINE L1 -15 6155 5731 380 230 0 11 chr2 39546880 39546967 -213709616 + LTR67 LTR ERVL 472 557 0 2430 298 49 16 chr2 39547784 39548738 -213707845 + L2 LINE L2 1535 2520 -794 330 355 26 0 chr2 39548828 39548983 -213707600 - L1ME4a LINE L1 -270 5851 5693 408 242 17 42 chr2 39549931 39550051 -213706532 - L1ME4a LINE L1 -462 5659 5543 195 362 14 0 chr2 39550945 39551014 -213705569 + MIR SINE MIR 81 150 -112 296 318 144 12 chr2 39551664 39551837 -213704746 + MIR SINE MIR 65 260 -2 1696 170 17 3 chr2 39552396 39552690 -213703893 - AluJo SINE Alu -14 298 1 2366 118 36 36 chr2 39553235 39553599 -213702984 - THE1B LTR MaLR 0 364 1 2391 78 10 10 chr2 39555488 39555796 -213700787 - AluY SINE Alu -3 308 1 22 0 0 0 chr2 39556319 39556341 -213700242 + AT_rich Low_complexity Low_complexity 1 22 0 278 284 49 98 chr2 39558043 39558226 -213698357 - MIR3 SINE MIR -11 197 24 790 285 143 32 chr2 39558249 39558684 -213697899 - MLT1K LTR MaLR -6 582 100 2505 72 0 0 chr2 39558806 39559112 -213697471 - AluY SINE Alu -5 306 1 793 190 0 29 chr2 39559285 39559422 -213697161 + FLAM_A SINE Alu 1 133 0 277 271 23 23 chr2 39560267 39560396 -213696187 + GA-rich Low_complexity Low_complexity 2 130 0 1032 249 32 0 chr2 39560608 39560825 -213695758 - MER58A DNA MER1_type 0 224 1 1460 186 77 55 chr2 39561169 39561534 -213695049 - MLT1A2 LTR MaLR 0 374 2 3737 107 52 33 chr2 39563119 39563755 -213692828 - MER39B LTR ERV1 0 653 6 185 220 40 0 chr2 39563797 39563847 -213692736 + MIR SINE MIR 100 151 -111 190 300 20 0 chr2 39563908 39563958 -213692625 + L2 LINE L2 3210 3260 -12 190 154 92 46 chr2 39564040 39564105 -213692478 - MER5B DNA MER1_type -6 172 105 315 120 0 20 chr2 39564237 39564287 -213692296 + MLT1F LTR MaLR 494 542 0 2362 110 0 0 chr2 39564468 39564778 -213691805 + AluSx SINE Alu 1 310 -2 318 296 133 20 chr2 39565275 39565478 -213691105 - L1MC4 LINE L1 -1036 7006 6781 624 76 0 0 chr2 39565888 39565967 -213690616 - AluSp SINE Alu -9 304 226 1360 102 6 0 chr2 39565967 39566144 -213690439 - AluSp SINE Alu -126 187 10 489 266 18 0 chr2 39566196 39566305 -213690278 + MER81 DNA DNA 1 111 -3 496 233 35 105 chr2 39566896 39567068 -213689515 - MIR3 SINE MIR -14 194 35 304 397 90 0 chr2 39567403 39567559 -213689024 + L2 LINE L2 2893 3062 -251 499 217 99 50 chr2 39567598 39567759 -213688824 + MLT1C LTR MaLR 1 169 -298 253 316 31 67 chr2 39567819 39568012 -213688571 + L2 LINE L2 2868 3053 -219 279 0 0 0 chr2 39568069 39568100 -213688483 + (TG)n Simple_repeat Simple_repeat 2 32 0 186 302 0 0 chr2 39568107 39568150 -213688433 + L2 LINE L2 3144 3186 -86 246 192 0 0 chr2 39568683 39568735 -213687848 + (CA)n Simple_repeat Simple_repeat 2 53 0 254 239 56 14 chr2 39569970 39570041 -213686542 + MIR SINE MIR 63 136 -72 589 66 22 0 chr2 39570111 39570202 -213686381 + (TAGA)n Simple_repeat Simple_repeat 3 95 0 193 313 16 0 chr2 39570669 39570733 -213685850 + L2 LINE L2 3198 3262 -10 270 136 0 0 chr2 39570738 39570782 -213685801 + (GGAA)n Simple_repeat Simple_repeat 1 44 0 261 211 0 0 chr2 39573161 39573213 -213683370 - MLT1G LTR MaLR 0 590 539 2130 214 108 22 chr2 39573289 39573788 -213682795 - MLT1F LTR MaLR 0 542 1 3025 211 73 90 chr2 39574558 39575627 -213680956 + L1ME1 LINE L1 4492 5564 -602 2437 107 52 19 chr2 39575627 39575990 -213680593 + THE1C LTR MaLR 1 375 0 3025 211 73 90 chr2 39575990 39576323 -213680260 + L1ME1 LINE L1 5564 5901 -265 2085 215 30 21 chr2 39576328 39576509 -213680074 + L1ME3A LINE L1 5625 5803 -367 2408 145 0 23 chr2 39576509 39576854 -213679729 + MER1B DNA MER1_type 1 337 0 2085 215 30 21 chr2 39576854 39577207 -213679376 + L1ME3A LINE L1 5803 6164 -6 310 192 29 15 chr2 39577554 39577661 -213678922 + MIR SINE MIR 8 173 -89 456 283 136 74 chr2 39578300 39578816 -213677767 + L1ME4a LINE L1 5506 6053 -68 2245 60 4 0 chr2 39578841 39579107 -213677476 + L1PA7 LINE L1 5877 6143 -11 9034 203 138 30 chr2 39579136 39581524 -213675059 + L1MD1 LINE L1 3 2648 -3892 4367 178 8 27 chr2 39581529 39582175 -213674408 + L1MD1 LINE L1 5806 6434 -202 2208 86 62 0 chr2 39582175 39582465 -213674118 + AluSx SINE Alu 1 308 -4 4367 178 8 27 chr2 39582465 39582661 -213673922 + L1MD1 LINE L1 6434 6632 -4 3862 185 30 55 chr2 39584621 39585444 -213671139 - L1MB8 LINE L1 -1 6177 5375 561 349 11 38 chr2 39586117 39586378 -213670205 + MIR SINE MIR 9 262 0 306 333 53 57 chr2 39586409 39586673 -213669910 + L2 LINE L2 2918 3180 -92 267 245 157 113 chr2 39586762 39586966 -213669617 - MIR SINE MIR -8 254 42 690 129 29 0 chr2 39587055 39587194 -213669389 + CT-rich Low_complexity Low_complexity 3 145 0 553 204 35 14 chr2 39587200 39587342 -213669241 - MLT1A1 LTR MaLR -49 316 172 749 300 19 14 chr2 39588612 39588822 -213667761 - MLT1I LTR MaLR 0 409 199 4783 171 24 21 chr2 39588823 39589537 -213667046 + L1MB8 LINE L1 4963 5684 -494 2123 128 14 0 chr2 39589537 39589833 -213666750 + AluSx SINE Alu 6 305 -7 4783 171 24 21 chr2 39589833 39590330 -213666253 + L1MB8 LINE L1 5684 6178 0 2518 111 70 41 chr2 39591399 39591442 -213665141 - MSTA LTR MaLR -3 425 385 2322 94 3 0 chr2 39591442 39591740 -213664843 + AluSp SINE Alu 1 299 -14 2518 111 70 41 chr2 39591740 39592109 -213664474 - MSTA LTR MaLR -43 385 1 999 208 97 14 chr2 39592328 39592535 -213664048 - MER58A DNA MER1_type 0 224 1 3041 178 83 24 chr2 39592569 39593217 -213663366 - Tigger7 DNA MER2_type 0 2587 1 187 307 13 53 chr2 39593443 39593518 -213663065 + L2 LINE L2 3200 3271 -1 4308 217 80 30 chr2 39593533 39595823 -213660760 + L1MC2 LINE L1 3 2809 -4132 * 5960 225 28 74 chr2 39595801 39597041 -213659542 + L1MC2 LINE L1 3792 4902 -2039 204 67 0 0 chr2 39597041 39597071 -213659512 + (CAA)n Simple_repeat Simple_repeat 1 30 0 5960 225 28 74 chr2 39597071 39597880 -213658703 + L1MC2 LINE L1 4902 5747 -1194 727 86 36 14 chr2 39597880 39598019 -213658564 + GA-rich Low_complexity Low_complexity 2 143 0 4790 166 40 52 chr2 39598021 39598469 -213658114 + L1MC2 LINE L1 6124 6576 -563 2114 100 18 0 chr2 39598469 39598769 -213657814 + AluSp SINE Alu 1 305 0 4790 166 40 52 chr2 39598769 39599348 -213657235 + L1MC2 LINE L1 6576 7139 0 199 229 115 16 chr2 39599407 39599468 -213657115 - MIR3 SINE MIR 0 208 142 190 383 64 0 chr2 39599457 39599551 -213657032 - L2 LINE L2 -2 3270 3171 * 257 106 0 21 chr2 39599607 39599654 -213656929 + (GA)n Simple_repeat Simple_repeat 1 46 0 248 154 19 0 chr2 39600285 39600337 -213656246 + CT-rich Low_complexity Low_complexity 4 56 0 380 229 31 42 chr2 39600441 39600537 -213656046 + L2 LINE L2 3178 3272 0 224 79 53 0 chr2 39601376 39601414 -213655169 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 5321 110 29 6 chr2 39603519 39604457 -213652126 + L1PB2 LINE L1 5176 6167 -1 280 291 23 23 chr2 39604460 39604546 -213652037 - MIR SINE MIR -156 106 21 716 151 0 0 chr2 39605146 39605252 -213651331 - FLAM_C SINE Alu -36 107 2 901 302 78 25 chr2 39605256 39606043 -213650540 + L1ME3A LINE L1 4640 5496 -666 1848 155 0 34 chr2 39606049 39606270 -213650313 + AluJb SINE Alu 1 209 -103 2271 194 80 15 chr2 39606270 39606745 -213649838 + LTR22 LTR ERVK 1 506 -3 1848 155 0 34 chr2 39606745 39606845 -213649738 + AluJb SINE Alu 209 311 -1 604 246 81 104 chr2 39606846 39607289 -213649294 + L1ME3A LINE L1 5499 5931 -239 2065 123 0 0 chr2 39607588 39607920 -213648663 + AluSx SINE Alu 1 332 0 201 171 0 0 chr2 39607943 39607978 -213648605 + A-rich Low_complexity Low_complexity 1 35 0 332 268 120 14 chr2 39608053 39608195 -213648388 - MIR3 SINE MIR -12 196 40 206 319 29 0 chr2 39608265 39608334 -213648249 + L2 LINE L2 3187 3257 -15 628 201 69 83 chr2 39610634 39610838 -213645745 - MIR SINE MIR -13 249 49 247 350 57 14 chr2 39611063 39611203 -213645380 - L2 LINE L2 -222 3050 2905 627 222 56 44 chr2 39611257 39611437 -213645146 + MLT1J LTR MaLR 5 186 -325 263 278 67 0 chr2 39611553 39611643 -213644940 + MLT1J LTR MaLR 379 474 -37 1132 234 77 15 chr2 39612772 39612943 -213643640 - MER20B DNA MER1_type -430 353 194 2254 131 0 0 chr2 39612943 39613249 -213643334 + AluSx SINE Alu 1 306 -6 1132 234 77 15 chr2 39613249 39613402 -213643181 - MER20B DNA MER1_type -589 194 9 1427 208 134 11 chr2 39614138 39614503 -213642080 + MER66A LTR ERV1 29 438 -40 282 235 50 0 chr2 39614795 39614914 -213641669 + (TCTCTG)n Simple_repeat Simple_repeat 2 126 0 1052 288 28 6 chr2 39615192 39615515 -213641068 + LTR16A LTR ERVL 121 450 0 505 281 27 86 chr2 39615518 39615667 -213640916 + HERV16 LTR ERVL 4 133 -4863 1961 144 34 0 chr2 39615667 39615959 -213640624 - AluJo SINE Alu -10 302 1 505 281 27 86 chr2 39615959 39616065 -213640518 + HERV16 LTR ERVL 133 244 -4752 4349 285 57 29 chr2 39616352 39617268 -213639315 + HERV16 LTR ERVL 1607 2579 -2417 1932 200 100 32 chr2 39617268 39617738 -213638845 - MLT1D LTR MaLR 0 505 4 4349 285 57 29 chr2 39617738 39618265 -213638318 + HERV16 LTR ERVL 2579 3090 -1906 1177 183 14 0 chr2 39618452 39618665 -213637918 + AluJo SINE Alu 91 306 -6 3919 307 52 42 chr2 39618670 39620635 -213635948 + HERV16 LTR ERVL 3341 5326 -438 730 331 74 11 chr2 39620962 39621246 -213635337 + LTR16A LTR ERVL 143 444 -6 189 0 0 0 chr2 39621266 39621287 -213635296 + (A)n Simple_repeat Simple_repeat 1 21 0 1190 187 58 4 chr2 39621963 39622188 -213634395 + MER8 DNA MER2_type 2 238 -1 2373 98 0 9 chr2 39622224 39622539 -213634044 - AluSx SINE Alu 0 312 1 1267 195 71 62 chr2 39623178 39623613 -213632970 - LTR27 LTR ERV1 -2 634 208 822 185 11 34 chr2 39623595 39623773 -213632810 - LTR28 LTR ERV1 -842 178 5 * 1834 193 0 0 chr2 39623846 39624157 -213632426 - AluJb SINE Alu 0 312 2 1181 266 81 35 chr2 39624189 39624240 -213632343 - HAL1b LINE L1 -416 932 885 1135 203 32 9 chr2 39624240 39624457 -213632126 - MER58A DNA MER1_type -2 222 1 1181 266 81 35 chr2 39624457 39624861 -213631722 - HAL1b LINE L1 -463 885 446 2323 106 3 0 chr2 39624861 39625163 -213631420 - AluSx SINE Alu -9 303 1 1181 266 81 35 chr2 39625163 39625250 -213631333 - HAL1b LINE L1 -902 446 364 365 319 54 43 chr2 39625545 39625824 -213630759 - HAL1b LINE L1 -1008 340 59 1809 150 26 23 chr2 39626409 39626523 -213630060 - AluJb SINE Alu -4 308 196 2370 94 7 0 chr2 39626523 39626822 -213629761 + AluSx SINE Alu 2 302 -10 372 22 0 0 chr2 39626822 39626867 -213629716 + (GA)n Simple_repeat Simple_repeat 2 46 0 1809 150 26 23 chr2 39626867 39627058 -213629525 - AluJb SINE Alu -115 197 1 5531 118 41 14 chr2 39627066 39627935 -213628648 - L1MC1 LINE L1 0 6333 5438 2104 140 3 3 chr2 39627935 39628242 -213628341 - AluSq SINE Alu -6 307 1 5531 118 41 14 chr2 39628242 39628257 -213628326 - L1MC1 LINE L1 -895 5438 5425 2491 193 87 19 chr2 39628442 39628553 -213628030 + MER45B DNA AcHobo 466 568 -1013 1687 178 10 23 chr2 39628553 39628862 -213627721 - AluJo SINE Alu -7 305 1 2491 193 87 19 chr2 39628862 39629288 -213627295 + MER45B DNA AcHobo 568 1040 0 305 267 67 0 chr2 39629288 39629378 -213627205 - MIR3 SINE MIR -12 196 101 249 196 0 0 chr2 39630133 39630184 -213626399 + (CA)n Simple_repeat Simple_repeat 1 51 0 1119 134 2 3 chr2 39630395 39630899 -213625684 - ALR/Alpha Satellite centromeric 0 503 1 21 0 0 0 chr2 39630939 39630960 -213625623 + AT_rich Low_complexity Low_complexity 1 21 0 989 172 13 16 chr2 39630997 39631219 -213625364 - ALR/Alpha Satellite centromeric 0 221 1 1056 192 1 4 chr2 39631414 39632437 -213624146 - ALR/Alpha Satellite centromeric 0 1020 1 994 131 11 26 chr2 39632452 39632773 -213623810 - ALR/Alpha Satellite centromeric -20 316 1 1078 172 3 17 chr2 39632878 39635589 -213620994 + ALR/Alpha Satellite centromeric 1 2674 -64 1094 167 1 3 chr2 39635801 39637061 -213619522 + ALR/Alpha Satellite centromeric 1 1257 -23 6129 57 3 5 chr2 39637064 39637836 -213618747 - L1PA3 LINE L1 -11 6144 5375 3169 16 0 0 chr2 39637834 39638202 -213618381 + L1PA3 LINE L1 4985 5352 -794 * 585 137 65 105 chr2 39638204 39638357 -213618226 - L1ME LINE L1 -607 5559 5413 21 0 0 0 chr2 39638362 39638383 -213618200 + AT_rich Low_complexity Low_complexity 1 21 0 207 69 0 0 chr2 39638406 39638435 -213618148 + (TG)n Simple_repeat Simple_repeat 2 30 0 247 266 51 13 chr2 39638478 39638557 -213618026 - MER112 DNA MER1_type -178 82 1 2043 128 45 0 chr2 39638652 39638942 -213617641 + AluSg SINE Alu 1 303 -7 347 103 0 17 chr2 39639453 39639511 -213617072 + (CA)n Simple_repeat Simple_repeat 1 57 0 437 243 27 9 chr2 39639556 39639667 -213616916 + L2 LINE L2 3188 3300 -13 1933 221 105 10 chr2 39639976 39640470 -213616113 - L1MD2 LINE L1 -226 6133 5593 * 6691 33 0 0 chr2 39640464 39641242 -213615341 - L1PA4 LINE L1 -3 6152 5375 3169 16 0 0 chr2 39641240 39641608 -213614975 + L1PA4 LINE L1 4985 5352 -794 * 585 137 65 105 chr2 39641610 39641763 -213614820 - L1MD2 LINE L1 -607 5559 5413 21 0 0 0 chr2 39641768 39641789 -213614794 + AT_rich Low_complexity Low_complexity 1 21 0 207 69 0 0 chr2 39641812 39641841 -213614742 + (TG)n Simple_repeat Simple_repeat 2 30 0 247 266 51 13 chr2 39641884 39641963 -213614620 - MER112 DNA MER1_type -178 82 1 2043 128 45 0 chr2 39642059 39642349 -213614234 + AluSg SINE Alu 1 303 -7 362 339 58 18 chr2 39642668 39642998 -213613585 + L1ME LINE L1 5469 5811 -351 21 0 0 0 chr2 39643204 39643225 -213613358 + AT_rich Low_complexity Low_complexity 1 21 0 1232 194 34 23 chr2 39649449 39649712 -213606871 - ORSL DNA AcHobo -1 274 9 653 203 0 0 chr2 39650080 39650198 -213606385 + FLAM_A SINE Alu 1 118 -15 35 0 0 0 chr2 39650204 39650239 -213606344 + AT_rich Low_complexity Low_complexity 1 35 0 740 164 20 108 chr2 39650495 39650690 -213605893 - MER58A DNA MER1_type 0 224 47 365 181 42 0 chr2 39651264 39651336 -213605247 + MER53 DNA DNA 15 89 -100 365 228 0 0 chr2 39651273 39651352 -213605231 - MER53 DNA DNA -16 173 95 22 0 0 0 chr2 39652356 39652378 -213604205 + GC_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr2 39654056 39654088 -213602495 + GC_rich Low_complexity Low_complexity 1 32 0 414 296 16 0 chr2 39655429 39655554 -213601029 - MIR SINE MIR -104 158 32 2205 93 6 37 chr2 39655645 39655967 -213600616 + AluSx SINE Alu 1 312 0 2270 89 30 7 chr2 39656251 39656554 -213600029 - AluSx SINE Alu -2 310 1 591 143 71 29 chr2 39658479 39658619 -213597964 - MER104 DNA Tc2 -3 177 32 2611 82 123 2 chr2 39658659 39659059 -213597524 - LTR7 LTR ERV1 -2 448 1 2413 95 50 13 chr2 39659059 39659437 -213597146 - HERVH LTR ERV1 0 7713 7322 1388 128 18 9 chr2 39659435 39659653 -213596930 - HERVH LTR ERV1 -1894 5819 5600 * 4538 136 1 1 chr2 39659654 39660316 -213596267 - HERVH LTR ERV1 -2564 5149 4488 1383 70 0 5 chr2 39660318 39660503 -213596080 - HERVH LTR ERV1 -3720 3993 3810 2337 97 0 0 chr2 39710546 39710844 -213545739 - AluSq SINE Alu -15 298 1 2269 83 10 0 chr2 39710853 39711143 -213545440 - AluY SINE Alu -16 295 3 2474 66 3 7 chr2 39711159 39711463 -213545120 - AluSp SINE Alu -10 303 1 302 270 115 71 chr2 39711675 39711721 -213544862 + L1MC/D LINE L1 5319 5362 -2446 844 163 16 0 chr2 39711721 39711850 -213544733 + FLAM_C SINE Alu 2 132 -1 302 270 115 71 chr2 39711850 39712055 -213544528 + L1MC/D LINE L1 5362 5581 -2227 2035 123 27 3 chr2 39712079 39712372 -213544211 + AluSx SINE Alu 1 300 -12 5321 110 29 6 chr2 39714434 39715372 -213541211 + L1PB2 LINE L1 5176 6167 -1 280 291 23 23 chr2 39715375 39715461 -213541122 - MIR SINE MIR -156 106 21 677 151 0 0 chr2 39716061 39716167 -213540416 - FLAM_C SINE Alu -36 107 2 935 304 36 20 chr2 39716230 39716734 -213539849 + L1ME3A LINE L1 4730 5241 -905 397 306 38 13 chr2 39716801 39716958 -213539625 + L1ME3A LINE L1 5336 5496 -666 1873 156 0 28 chr2 39716964 39717185 -213539398 + AluJb SINE Alu 1 212 -100 2135 182 67 36 chr2 39717185 39717662 -213538921 + LTR22B LTR ERVK 1 492 0 1873 156 0 28 chr2 39717662 39717760 -213538823 + AluJb SINE Alu 212 311 -1 574 246 81 104 chr2 39717761 39718204 -213538379 + L1ME3A LINE L1 5499 5931 -239 2092 123 0 0 chr2 39718503 39718835 -213537748 + AluSx SINE Alu 1 332 0 201 171 0 0 chr2 39718858 39718893 -213537690 + A-rich Low_complexity Low_complexity 1 35 0 290 275 120 14 chr2 39718968 39719110 -213537473 - MIR3 SINE MIR -12 196 40 184 319 29 0 chr2 39719180 39719249 -213537334 + L2 LINE L2 3187 3257 -15 567 201 69 83 chr2 39721548 39721752 -213534831 - MIR SINE MIR -13 249 49 229 364 10 0 chr2 39721977 39722076 -213534507 - L2 LINE L2 -222 3050 2951 633 222 56 44 chr2 39722171 39722351 -213534232 + MLT1J LTR MaLR 5 186 -325 262 256 78 11 chr2 39722467 39722557 -213534026 + MLT1J LTR MaLR 379 474 -37 1126 234 77 15 chr2 39723686 39723857 -213532726 - MER20B DNA MER1_type -430 353 194 2272 131 0 0 chr2 39723857 39724163 -213532420 + AluSx SINE Alu 1 306 -6 1126 234 77 15 chr2 39724163 39724316 -213532267 - MER20B DNA MER1_type -589 194 9 1427 208 134 11 chr2 39725052 39725417 -213531166 + MER66A LTR ERV1 29 438 -40 282 235 50 0 chr2 39725709 39725828 -213530755 + (TCTCTG)n Simple_repeat Simple_repeat 2 126 0 1052 288 28 6 chr2 39726106 39726429 -213530154 + LTR16A LTR ERVL 121 450 0 505 281 27 86 chr2 39726432 39726581 -213530002 + HERV16 LTR ERVL 4 133 -4863 1961 144 34 0 chr2 39726581 39726873 -213529710 - AluJo SINE Alu -10 302 1 505 281 27 86 chr2 39726873 39726979 -213529604 + HERV16 LTR ERVL 133 244 -4752 4349 285 57 29 chr2 39727266 39728182 -213528401 + HERV16 LTR ERVL 1607 2579 -2417 1932 200 100 32 chr2 39728182 39728652 -213527931 - MLT1D LTR MaLR 0 505 4 4349 285 57 29 chr2 39728652 39729179 -213527404 + HERV16 LTR ERVL 2579 3090 -1906 1177 183 14 0 chr2 39729366 39729579 -213527004 + AluJo SINE Alu 91 306 -6 3919 307 52 42 chr2 39729584 39731549 -213525034 + HERV16 LTR ERVL 3341 5326 -438 730 331 74 11 chr2 39731876 39732160 -213524423 + LTR16A LTR ERVL 143 444 -6 189 0 0 0 chr2 39732180 39732201 -213524382 + (A)n Simple_repeat Simple_repeat 1 21 0 1190 187 58 4 chr2 39732877 39733102 -213523481 + MER8 DNA MER2_type 2 238 -1 2373 98 0 9 chr2 39733138 39733453 -213523130 - AluSx SINE Alu 0 312 1 1267 195 71 62 chr2 39734092 39734527 -213522056 - LTR27 LTR ERV1 -2 634 208 822 185 11 34 chr2 39734509 39734687 -213521896 - LTR28 LTR ERV1 -842 178 5 * 1834 193 0 0 chr2 39734760 39735071 -213521512 - AluJb SINE Alu 0 312 2 1181 266 81 35 chr2 39735103 39735154 -213521429 - HAL1b LINE L1 -416 932 885 1135 203 32 9 chr2 39735154 39735371 -213521212 - MER58A DNA MER1_type -2 222 1 1181 266 81 35 chr2 39735371 39735775 -213520808 - HAL1b LINE L1 -463 885 446 2323 106 3 0 chr2 39735775 39736077 -213520506 - AluSx SINE Alu -9 303 1 1181 266 81 35 chr2 39736077 39736164 -213520419 - HAL1b LINE L1 -902 446 364 365 319 54 43 chr2 39736459 39736738 -213519845 - HAL1b LINE L1 -1008 340 59 1809 150 26 23 chr2 39737323 39737437 -213519146 - AluJb SINE Alu -4 308 196 2370 94 7 0 chr2 39737437 39737736 -213518847 + AluSx SINE Alu 2 302 -10 372 22 0 0 chr2 39737736 39737781 -213518802 + (GA)n Simple_repeat Simple_repeat 2 46 0 1809 150 26 23 chr2 39737781 39737972 -213518611 - AluJb SINE Alu -115 197 1 5531 118 41 14 chr2 39737980 39738849 -213517734 - L1MC1 LINE L1 0 6333 5438 2104 140 3 3 chr2 39738849 39739156 -213517427 - AluSq SINE Alu -6 307 1 5531 118 41 14 chr2 39739156 39739171 -213517412 - L1MC1 LINE L1 -895 5438 5425 2491 193 87 19 chr2 39739356 39739467 -213517116 + MER45B DNA AcHobo 466 568 -1013 1687 178 10 23 chr2 39739467 39739776 -213516807 - AluJo SINE Alu -7 305 1 2491 193 87 19 chr2 39739776 39740202 -213516381 + MER45B DNA AcHobo 568 1040 0 305 267 67 0 chr2 39740202 39740292 -213516291 - MIR3 SINE MIR -12 196 101 249 196 0 0 chr2 39741047 39741098 -213515485 + (CA)n Simple_repeat Simple_repeat 1 51 0 190 312 48 56 chr2 39741813 39741938 -213514645 + L2 LINE L2 3179 3302 -11 513 291 71 71 chr2 39743099 39743137 -213513446 - MLT1K LTR MaLR -3 585 548 2784 127 24 0 chr2 39743137 39743555 -213513028 - MSTA LTR MaLR 0 428 1 513 291 71 71 chr2 39743555 39743938 -213512645 - MLT1K LTR MaLR -39 549 164 2692 160 27 0 chr2 39745465 39745914 -213510669 - L1MD3 LINE L1 -1 7994 7534 2198 129 46 0 chr2 39746295 39746643 -213509940 - THE1B LTR MaLR 0 364 1 363 280 64 8 chr2 39747424 39747549 -213509034 + MIR3 SINE MIR 14 145 -63 419 286 49 35 chr2 39749291 39749540 -213507043 - MIR SINE MIR -6 256 3 1854 132 68 7 chr2 39749710 39749990 -213506593 - AluSx SINE Alu -11 301 5 370 286 116 68 chr2 39749990 39750884 -213505699 - L1M4 LINE L1 -1130 5016 4036 2165 122 0 0 chr2 39750884 39751172 -213505411 + AluSx SINE Alu 5 292 -20 370 286 116 68 chr2 39751172 39751606 -213504977 - L1M4 LINE L1 -2110 4036 3624 1826 239 49 18 chr2 39751648 39752099 -213504484 - LTR40a LTR ERVL -53 466 2 1969 93 3 96 chr2 39752220 39752382 -213504201 + AluSp SINE Alu 1 120 -193 2442 74 0 0 chr2 39752382 39752678 -213503905 + AluY SINE Alu 2 297 -14 1969 93 3 96 chr2 39752678 39752837 -213503746 + AluSp SINE Alu 120 292 -21 201 39 0 0 chr2 39753128 39753154 -213503429 + (TC)n Simple_repeat Simple_repeat 1 26 0 * 279 0 0 0 chr2 39753153 39753184 -213503399 + (CA)n Simple_repeat Simple_repeat 1 31 0 306 0 0 0 chr2 39753874 39753908 -213502675 + (CA)n Simple_repeat Simple_repeat 2 35 0 2002 104 77 11 chr2 39754170 39754457 -213502126 + AluSx SINE Alu 1 306 -6 442 295 49 0 chr2 39754787 39754909 -213501674 + L2 LINE L2 3143 3270 -2 15322 130 19 11 chr2 39755437 39756683 -213499900 - Tigger1 DNA MER2_type 0 2418 1183 2076 104 20 17 chr2 39756683 39756980 -213499603 - AluSx SINE Alu -14 298 1 15322 130 19 11 chr2 39756980 39757690 -213498893 - Tigger1 DNA MER2_type -1235 1183 437 6479 122 9 17 chr2 39757690 39758667 -213497916 + LTR5 LTR ERVK 1 969 0 15322 130 19 11 chr2 39758667 39759108 -213497475 - Tigger1 DNA MER2_type -1981 437 1 731 182 78 0 chr2 39759456 39759610 -213496973 - FRAM SINE Alu 0 166 1 2041 304 82 49 chr2 39760044 39760267 -213496316 + ERVL LTR ERVL 4112 4326 -1438 2255 96 3 13 chr2 39760267 39760569 -213496014 + AluSx SINE Alu 1 299 -13 2041 304 82 49 chr2 39760569 39760720 -213495863 + ERVL LTR ERVL 4326 4471 -1293 2281 99 0 7 chr2 39760720 39761023 -213495560 - AluSq SINE Alu -12 301 1 2041 304 82 49 chr2 39761023 39761813 -213494770 + ERVL LTR ERVL 4471 5315 -449 2292 99 0 13 chr2 39762363 39762665 -213493918 + AluSx SINE Alu 1 298 -14 222 286 0 0 chr2 39762973 39763036 -213493547 + MIR SINE MIR 79 141 -67 924 304 106 15 chr2 39763124 39763842 -213492741 + L2 LINE L2 2528 3313 0 242 93 0 23 chr2 39763957 39764000 -213492583 + (TGAA)n Simple_repeat Simple_repeat 2 43 0 189 107 0 0 chr2 39764018 39764046 -213492537 + (CTA)n Simple_repeat Simple_repeat 2 29 0 944 191 141 37 chr2 39764497 39764795 -213491788 + L1MC5 LINE L1 7585 7913 -48 1892 123 84 46 chr2 39764825 39765192 -213491391 - MER4B LTR ERV1 -229 381 1 1267 313 150 32 chr2 39766524 39767410 -213489173 - L2 LINE L2 -2106 1208 218 527 230 53 9 chr2 39767416 39767529 -213489054 + MER5B DNA MER1_type 2 119 -59 1556 156 75 19 chr2 39767558 39767879 -213488704 + MER2 DNA MER2_type 1 339 -6 292 253 11 11 chr2 39768168 39768263 -213488320 + LTR37B LTR ERV1 8 102 -366 1654 137 127 67 chr2 39768369 39768785 -213487798 + L1MA9 LINE L1 5789 6229 -83 338 171 298 25 chr2 39768810 39768968 -213487615 + Charlie1 DNA MER1_type 2561 2761 0 418 231 59 21 chr2 39769014 39769200 -213487383 + LTR37B LTR ERV1 276 468 0 208 281 115 58 chr2 39769694 39769767 -213486816 + MER5A DNA MER1_type 18 85 -104 1088 74 0 7 chr2 39769767 39769916 -213486667 + L1PA5 LINE L1 6004 6151 -3 208 281 115 58 chr2 39769916 39769981 -213486602 + MER5A DNA MER1_type 85 164 -25 512 195 150 0 chr2 39769997 39770110 -213486473 + FLAM_A SINE Alu 1 130 -3 337 247 135 23 chr2 39770419 39770586 -213485997 + MIR SINE MIR 2 181 -61 2303 120 0 0 chr2 39770820 39771120 -213485463 + AluSx SINE Alu 1 300 -12 342 301 79 22 chr2 39771654 39771822 -213484761 - MIR SINE MIR -63 145 13 1730 159 58 28 chr2 39772251 39772615 -213483968 - THE1C LTR MaLR 0 375 1 2207 103 0 0 chr2 39774173 39774473 -213482110 + AluY SINE Alu 1 300 -11 231 287 0 20 chr2 39776045 39776146 -213480437 + A-rich Low_complexity Low_complexity 4 102 0 47 0 0 0 chr2 39779075 39779122 -213477461 + AT_rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr2 39780308 39780329 -213476254 + AT_rich Low_complexity Low_complexity 1 21 0 978 198 0 6 chr2 39780556 39780723 -213475860 - FRAM SINE Alu -11 165 1 2255 107 3 0 chr2 39780878 39781176 -213475407 - AluSp SINE Alu -14 299 1 7386 164 166 63 chr2 39781215 39782218 -213474365 + L1MA3 LINE L1 13 911 -6654 473 130 0 0 chr2 39782218 39782287 -213474296 + AluS SINE Alu 1 69 -244 7386 164 166 63 chr2 39782287 39783111 -213473472 + L1MA3 LINE L1 911 1649 -5916 1953 136 49 0 chr2 39783111 39783398 -213473185 - AluJb SINE Alu -11 301 1 7386 164 166 63 chr2 39783398 39783756 -213472827 + L1MA3 LINE L1 1649 1969 -5596 1081 212 14 0 chr2 39783756 39783973 -213472610 + AluJo SINE Alu 1 220 -92 7386 164 166 63 chr2 39783973 39785153 -213471430 + L1MA3 LINE L1 1969 3026 -4539 2054 112 0 62 chr2 39785153 39785474 -213471109 + AluSx SINE Alu 1 301 -11 7386 164 166 63 chr2 39785474 39786487 -213470096 + L1MA3 LINE L1 3026 3933 -3632 210 71 0 0 chr2 39786487 39786515 -213470068 + (CAAT)n Simple_repeat Simple_repeat 1 28 0 7386 164 166 63 chr2 39786515 39786794 -213469789 + L1MA3 LINE L1 3933 5549 -2016 902 143 12 0 chr2 39786813 39786981 -213469602 + L1MA3 LINE L1 6304 6473 -1092 1364 109 0 0 chr2 39786982 39787156 -213469427 + AluSq SINE Alu 1 174 -139 243 133 0 0 chr2 39787255 39787300 -213469283 - Alu SINE Alu 0 300 256 762 143 0 8 chr2 39787300 39787426 -213469157 + AluSg/x SINE Alu 179 303 -9 6225 117 31 21 chr2 39787426 39788662 -213467921 + L1MA3 LINE L1 6468 7724 0 22 0 0 0 chr2 39788669 39788691 -213467892 + AT_rich Low_complexity Low_complexity 1 22 0 2437 67 37 0 chr2 39790536 39790833 -213465750 - AluSp SINE Alu -5 308 1 189 74 0 0 chr2 39791010 39791037 -213465546 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 1193 186 174 22 chr2 39791331 39791734 -213464849 + L1ME3A LINE L1 5707 6170 0 1847 126 133 36 chr2 39792113 39792335 -213464248 + MSTA LTR MaLR 1 200 -228 2269 77 13 7 chr2 39792335 39792635 -213463948 + AluSg SINE Alu 1 302 -8 1847 126 133 36 chr2 39792635 39792802 -213463781 + MSTA LTR MaLR 200 428 0 905 202 5 30 chr2 39793606 39793809 -213462774 - MER20 DNA MER1_type -15 204 7 2106 121 3 10 chr2 39794878 39795183 -213461400 + AluSq SINE Alu 4 306 -7 311 290 0 0 chr2 39796337 39796406 -213460177 + L2 LINE L2 3204 3272 0 209 269 27 121 chr2 39796530 39796679 -213459904 - MIR SINE MIR -42 220 86 808 174 65 13 chr2 39797926 39798081 -213458502 + FAM SINE Alu 10 172 -13 2129 73 49 7 chr2 39798103 39798390 -213458193 + AluSq SINE Alu 2 300 -13 1976 167 0 0 chr2 39799223 39799522 -213457061 + AluJb SINE Alu 1 299 -13 192 40 0 0 chr2 39799522 39799547 -213457036 + (GA)n Simple_repeat Simple_repeat 2 26 0 2198 106 7 0 chr2 39799732 39800033 -213456550 + AluSq SINE Alu 1 303 -10 455 231 148 18 chr2 39800175 39800404 -213456179 + L1MC5 LINE L1 7659 7917 -44 207 0 0 0 chr2 39800739 39800762 -213455821 + (CAAAAA)n Simple_repeat Simple_repeat 1 23 0 1767 94 16 101 chr2 39800769 39801100 -213455483 + AluSx SINE Alu 1 305 0 1555 148 0 0 chr2 39801607 39801836 -213454747 - AluJb SINE Alu 0 312 84 393 307 73 7 chr2 39802195 39802332 -213454251 + L2 LINE L2 3167 3312 -1 879 176 7 14 chr2 39802639 39802787 -213453796 + FRAM SINE Alu 1 146 -30 493 193 123 9 chr2 39802908 39803022 -213453561 - L2 LINE L2 -2 3311 3185 870 97 7 83 chr2 39803266 39803410 -213453173 - FLAM_C SINE Alu 0 133 1 581 128 23 0 chr2 39803638 39803724 -213452859 - FRAM SINE Alu -31 145 58 2298 75 3 7 chr2 39803901 39804193 -213452390 + AluSp SINE Alu 1 291 -22 1981 118 28 9 chr2 39804655 39804978 -213451605 + L1MB3 LINE L1 5855 6183 0 2566 238 50 69 chr2 39805081 39805516 -213451067 + L1MCb LINE L1 4 446 -5599 1023 86 0 0 chr2 39805516 39805668 -213450915 + (CA)n Simple_repeat Simple_repeat 2 153 0 2566 238 50 69 chr2 39805668 39805881 -213450702 + L1MCb LINE L1 446 662 -5383 545 196 161 0 chr2 39805881 39805993 -213450590 + FLAM_A SINE Alu 1 130 -3 2566 238 50 69 chr2 39805993 39806423 -213450160 + L1MCb LINE L1 662 1062 -4983 967 161 333 32 chr2 39806423 39806612 -213449971 + L1MCb LINE L1 1498 1629 -4935 2120 135 0 0 chr2 39806612 39806916 -213449667 + AluSx SINE Alu 1 304 -8 967 161 333 32 chr2 39806916 39807168 -213449415 + L1MCb LINE L1 1629 2072 -4492 6499 242 71 32 chr2 39807181 39807563 -213449020 + L1MCb LINE L1 2195 2561 -4003 2033 128 10 0 chr2 39807563 39807853 -213448730 + AluSx SINE Alu 1 293 -19 6499 242 71 32 chr2 39807853 39809051 -213447532 + L1MCb LINE L1 2561 3711 -2853 2255 104 16 3 chr2 39809051 39809358 -213447225 + AluSx SINE Alu 1 311 -1 6499 242 71 32 chr2 39809358 39809753 -213446830 + L1MCb LINE L1 3711 4089 -2475 2262 114 7 0 chr2 39809753 39810059 -213446524 + AluSx SINE Alu 1 308 -4 6499 242 71 32 chr2 39810059 39810927 -213445656 + L1MCb LINE L1 4089 5209 -1355 1973 112 23 33 chr2 39810927 39811059 -213445524 + AluSx SINE Alu 1 133 -179 2313 104 0 10 chr2 39811059 39811367 -213445216 + AluSc SINE Alu 1 305 -4 1973 112 23 33 chr2 39811367 39811538 -213445045 + AluSx SINE Alu 133 301 -11 6499 242 71 32 chr2 39811538 39811731 -213444852 + L1MCb LINE L1 5209 5393 -1171 1939 166 72 41 chr2 39811749 39812120 -213444463 + L1MB8 LINE L1 5649 6049 -129 1830 158 10 0 chr2 39812120 39812412 -213444171 - AluJo SINE Alu -17 295 1 1939 166 72 41 chr2 39812412 39812544 -213444039 + L1MB8 LINE L1 6049 6175 -3 714 194 0 14 chr2 39812815 39812959 -213443624 + FLAM_A SINE Alu 1 142 0 628 175 0 4 chr2 39812987 39813202 -213443381 + AluJo SINE Alu 1 289 -23 22 0 0 0 chr2 39813203 39813225 -213443358 + AT_rich Low_complexity Low_complexity 1 22 0 2166 130 0 0 chr2 39813935 39814236 -213442347 - AluSx SINE Alu -11 301 1 2248 72 14 0 chr2 39814326 39814628 -213441955 + AluSp SINE Alu 1 306 0 21 36 0 0 chr2 39814661 39814689 -213441894 + AT_rich Low_complexity Low_complexity 1 28 0 313 65 102 0 chr2 39814759 39814867 -213441716 + (TA)n Simple_repeat Simple_repeat 1 119 0 2043 228 53 30 chr2 39814963 39815657 -213440926 + L1ME3 LINE L1 5452 6161 -1 1730 106 94 0 chr2 39815666 39815962 -213440621 + AluY SINE Alu 1 311 0 318 318 185 33 chr2 39816550 39816761 -213439822 + MIR SINE MIR 10 252 -10 1489 203 112 58 chr2 39816761 39817109 -213439474 + L1MC5 LINE L1 7228 7556 -405 2293 121 0 3 chr2 39817109 39817422 -213439161 + AluSx SINE Alu 1 312 0 1489 203 112 58 chr2 39817422 39817744 -213438839 + L1MC5 LINE L1 7556 7934 -27 2204 136 23 0 chr2 39818026 39818372 -213438211 + L1PA16 LINE L1 5804 6157 -9 2144 228 77 49 chr2 39818394 39818852 -213437731 + L1MC3 LINE L1 6966 7455 -330 2117 94 7 4 chr2 39818852 39819129 -213437454 + AluSq SINE Alu 14 291 -22 2144 228 77 49 chr2 39819129 39819419 -213437164 + L1MC3 LINE L1 7455 7735 -50 1356 219 62 51 chr2 39819507 39819586 -213436997 + L1ME3 LINE L1 5725 5802 -360 2190 132 0 0 chr2 39819586 39819897 -213436686 - AluSq SINE Alu -2 311 1 1356 219 62 51 chr2 39819897 39820250 -213436333 + L1ME3 LINE L1 5802 6162 0 287 167 0 154 chr2 39820922 39821000 -213435583 - MER117 DNA MER1_type -130 67 2 1603 166 3 63 chr2 39821261 39821563 -213435020 + AluJb SINE Alu 1 284 -28 184 234 94 62 chr2 39822277 39822341 -213434242 - L2 LINE L2 -220 3093 3028 1271 130 13 59 chr2 39822845 39823083 -213433500 + AluJb SINE Alu 86 312 0 2513 122 40 8 chr2 39823608 39823961 -213432622 + THE1B LTR MaLR 1 364 0 2232 98 24 0 chr2 39824241 39824536 -213432047 + AluSx SINE Alu 1 302 -10 477 158 16 102 chr2 39825713 39825840 -213430743 + MIR SINE MIR 89 204 -58 362 305 119 70 chr2 39826162 39826394 -213430189 + L2 LINE L2 2621 2840 -432 2343 140 9 12 chr2 39826394 39826730 -213429853 - MER1B DNA MER1_type 0 337 3 362 305 119 70 chr2 39826730 39827018 -213429565 + L2 LINE L2 2840 3157 -115 889 312 33 68 chr2 39827072 39827633 -213428950 + L2 LINE L2 2772 3312 -1 2085 137 10 0 chr2 39827674 39827973 -213428610 - AluSx SINE Alu -10 302 1 2280 98 3 0 chr2 39828091 39828386 -213428197 + AluSp SINE Alu 1 296 -17 8136 29 1 0 chr2 39828557 39829592 -213426991 + L1PA3 LINE L1 5120 6155 0 1834 174 21 37 chr2 39830319 39830699 -213425884 + L1MC1 LINE L1 5958 6331 -2 21 36 0 0 chr2 39831375 39831403 -213425180 + AT_rich Low_complexity Low_complexity 1 28 0 2155 101 14 7 chr2 39831403 39831699 -213424884 - AluSq SINE Alu -15 298 1 200 61 61 0 chr2 39833133 39833166 -213423417 + CT-rich Low_complexity Low_complexity 2 36 0 2246 81 3 3 chr2 39834603 39834886 -213421697 + AluSp SINE Alu 1 283 -30 233 235 173 0 chr2 39835917 39835998 -213420585 + MIR SINE MIR 129 223 -39 1650 158 135 7 chr2 39836274 39836578 -213420005 + MER2 DNA MER2_type 1 343 -1 2246 117 3 0 chr2 39836871 39837179 -213419404 - AluSx SINE Alu -3 309 1 1541 207 27 3 chr2 39837270 39837569 -213419014 - AluJb SINE Alu -6 306 1 21 0 0 0 chr2 39837582 39837603 -213418980 + AT_rich Low_complexity Low_complexity 1 21 0 652 227 0 62 chr2 39837811 39837987 -213418596 - FRAM SINE Alu -1 165 1 1866 118 22 4 chr2 39838000 39838300 -213418283 - AluSx SINE Alu 0 311 7 2180 88 61 0 chr2 39838316 39838610 -213417973 - AluSx SINE Alu 0 312 1 2402 48 13 13 chr2 39838614 39838925 -213417658 - AluY SINE Alu 0 311 1 203 208 0 19 chr2 39839030 39839083 -213417500 + T-rich Low_complexity Low_complexity 2 53 0 635 149 0 11 chr2 39839101 39839195 -213417388 - AluJb SINE Alu -88 224 132 951 100 0 0 chr2 39839209 39839329 -213417254 + AluSg SINE Alu 1 120 -190 2326 97 3 25 chr2 39839475 39839794 -213416789 + AluSx SINE Alu 1 312 0 313 266 171 13 chr2 39839930 39840088 -213416495 + L1MEc LINE L1 57 239 -6157 1959 253 97 70 chr2 39840560 39841556 -213415027 + L1MEc LINE L1 656 1623 -4592 2113 75 28 11 chr2 39841556 39841838 -213414745 + AluSc SINE Alu 1 287 -22 1959 253 97 70 chr2 39841838 39842253 -213414330 + L1MEc LINE L1 1623 2025 -4190 2303 112 0 0 chr2 39842253 39842556 -213414027 + AluSp SINE Alu 1 303 -10 1959 253 97 70 chr2 39842556 39842773 -213413810 + L1MEc LINE L1 2025 2235 -3980 2150 101 38 0 chr2 39842773 39843061 -213413522 - AluSq SINE Alu -14 299 1 1959 253 97 70 chr2 39843061 39843346 -213413237 + L1MEc LINE L1 2235 2610 -3605 2097 91 40 10 chr2 39843346 39843642 -213412941 - AluSx SINE Alu -7 305 1 1959 253 97 70 chr2 39843642 39843729 -213412854 + L1MEc LINE L1 2610 2693 -3522 1129 148 220 9 chr2 39843743 39843849 -213412734 - Charlie5 DNA MER1_type -28 2596 2514 1769 93 118 38 chr2 39843849 39844138 -213412445 - AluJb SINE Alu 0 312 1 1129 148 220 9 chr2 39844138 39844368 -213412215 - Charlie5 DNA MER1_type -110 2514 2189 249 189 81 14 chr2 39844368 39844442 -213412141 - Charlie5 DNA MER1_type -2498 114 36 2311 109 0 0 chr2 39844693 39844996 -213411587 + AluSc SINE Alu 1 303 -6 1658 64 10 5 chr2 39845114 39845318 -213411265 + AluSc SINE Alu 96 300 -9 184 306 0 0 chr2 39845509 39845558 -213411025 - MIR3 SINE MIR -35 173 125 330 294 206 0 chr2 39845627 39845763 -213410820 - MER5A DNA MER1_type 0 189 26 2114 74 42 7 chr2 39846066 39846351 -213410232 + AluY SINE Alu 1 295 -16 2197 94 0 27 chr2 39846841 39847140 -213409443 + AluSx SINE Alu 9 299 -13 2211 101 13 13 chr2 39847491 39847798 -213408785 + AluSq SINE Alu 1 307 -6 1721 161 12 46 chr2 39847905 39848228 -213408355 - AluJb SINE Alu 0 312 1 239 227 34 92 chr2 39848495 39848614 -213407969 + L1MC/D LINE L1 5644 5755 -2053 2461 69 0 3 chr2 39848717 39849021 -213407562 + AluY SINE Alu 1 303 -8 248 260 128 77 chr2 39849422 39849618 -213406965 - MIR SINE MIR -55 207 2 457 279 52 22 chr2 39850082 39850218 -213406365 - MER5A DNA MER1_type 0 189 50 642 267 187 33 chr2 39850285 39850585 -213405998 - L2 LINE L2 -1 3312 2967 304 332 63 21 chr2 39850703 39850893 -213405690 - MIR SINE MIR -64 198 1 2300 85 0 0 chr2 39851627 39851939 -213404644 + AluSg SINE Alu 1 312 0 2477 68 0 0 chr2 39852408 39852704 -213403879 + AluY SINE Alu 1 296 -15 537 68 0 0 chr2 39852777 39852851 -213403732 + (CA)n Simple_repeat Simple_repeat 1 74 0 2168 108 0 14 chr2 39853018 39853154 -213403429 + AluSq SINE Alu 1 137 -176 1810 121 48 35 chr2 39853154 39853443 -213403140 + AluSg SINE Alu 1 293 -17 2168 108 0 14 chr2 39853443 39853602 -213402981 + AluSq SINE Alu 137 292 -21 567 149 168 0 chr2 39854658 39854765 -213401818 - FLAM_C SINE Alu -8 125 1 1865 69 0 13 chr2 39854967 39855200 -213401383 + AluY SINE Alu 1 230 -81 208 229 9 67 chr2 39855893 39855998 -213400585 + C-rich Low_complexity Low_complexity 3 101 0 1687 66 5 0 chr2 39856843 39857054 -213399529 - AluSg1 SINE Alu -97 212 1 288 172 0 0 chr2 39857352 39857410 -213399173 + GA-rich Low_complexity Low_complexity 1 58 0 225 290 0 0 chr2 39857768 39857830 -213398753 + T-rich Low_complexity Low_complexity 1 62 0 22 0 0 0 chr2 39857912 39857934 -213398649 + AT_rich Low_complexity Low_complexity 1 22 0 2198 115 3 0 chr2 39857934 39858230 -213398353 + AluSx SINE Alu 1 297 -15 318 216 21 82 chr2 39858233 39858330 -213398253 + MER66B LTR ERV1 292 382 -104 1641 154 31 0 chr2 39858536 39858795 -213397788 + AluJo SINE Alu 1 267 -45 2013 114 22 41 chr2 39859695 39860010 -213396573 + AluSg SINE Alu 2 310 0 376 303 162 11 chr2 39860342 39860527 -213396056 + MIR SINE MIR 49 261 -1 371 300 33 89 chr2 39860615 39860795 -213395788 - MIR SINE MIR -71 191 22 198 0 0 0 chr2 39860797 39860819 -213395764 + (T)n Simple_repeat Simple_repeat 1 22 0 752 85 0 11 chr2 39860823 39860917 -213395666 - AluSg/x SINE Alu -135 177 85 2378 86 3 6 chr2 39861365 39861679 -213394904 + AluSp SINE Alu 1 313 0 229 188 0 0 chr2 39862396 39862444 -213394139 + MLT1H1 LTR MaLR 472 519 -36 958 224 74 83 chr2 39862801 39862883 -213393700 - MER69 DNA AcHobo 0 2526 2445 1717 151 28 11 chr2 39862883 39863167 -213393416 + AluJb SINE Alu 14 302 -10 958 224 74 83 chr2 39863167 39863336 -213393247 - MER69 DNA AcHobo -81 2445 2278 2211 121 0 13 chr2 39863336 39863649 -213392934 - AluSx SINE Alu -3 309 1 958 224 74 83 chr2 39863649 39863815 -213392768 - MER69 DNA AcHobo -248 2278 2112 1779 165 0 11 chr2 39863816 39864216 -213392367 + AluJb SINE Alu 3 399 0 327 25 0 0 chr2 39864216 39864256 -213392327 + (GGGA)n Simple_repeat Simple_repeat 1 40 0 768 162 6 11 chr2 39864426 39864605 -213391978 + GA-rich Low_complexity Low_complexity 3 180 0 185 250 23 0 chr2 39865229 39865273 -213391310 - MIR SINE MIR 0 262 218 1294 111 0 0 chr2 39865296 39865467 -213391116 - AluSp SINE Alu -6 307 137 2753 3 0 0 chr2 39865470 39865760 -213390823 - AluYa5 SINE Alu -10 301 12 464 321 38 27 chr2 39865761 39865945 -213390638 - MIR SINE MIR -75 187 2 2460 76 0 3 chr2 39866473 39866777 -213389806 + AluSg SINE Alu 1 303 -7 396 287 4 8 chr2 39866839 39867022 -213389561 + MER41B LTR ERV1 112 427 -208 182 284 64 64 chr2 39868365 39868474 -213388109 + L3 LINE CR1 613 721 -856 1594 162 19 52 chr2 39869491 39869800 -213386783 + AluJo SINE Alu 10 308 -4 2488 76 0 0 chr2 39870084 39870387 -213386196 - AluY SINE Alu -8 303 1 1575 251 54 54 chr2 39870432 39870504 -213386079 - MLT1L LTR MaLR -4 611 540 2329 74 7 32 chr2 39870504 39870813 -213385770 + AluSg SINE Alu 1 301 -9 1575 251 54 54 chr2 39870813 39871349 -213385234 - MLT1L LTR MaLR -74 541 3 25 0 0 0 chr2 39871906 39871931 -213384652 + AT_rich Low_complexity Low_complexity 1 25 0 1057 205 5 5 chr2 39871976 39872171 -213384412 + AluJb SINE Alu 109 303 -9 497 269 98 21 chr2 39872172 39872365 -213384218 + MER102b DNA MER1_type 134 341 0 3193 141 21 3 chr2 39872427 39873159 -213383424 + L1PA15 LINE L1 4752 5491 -669 2385 120 11 0 chr2 39873159 39873515 -213383068 + L1PA15 LINE L1 5804 6165 0 2074 134 0 23 chr2 39873530 39873670 -213382913 + AluSx SINE Alu 1 143 -169 2114 138 0 3 chr2 39873670 39873968 -213382615 + AluSx SINE Alu 1 297 -15 2074 134 0 23 chr2 39873968 39874133 -213382450 + AluSx SINE Alu 143 299 -13 2355 93 10 3 chr2 39874678 39874978 -213381605 - AluSg SINE Alu -8 302 1 2061 112 0 0 chr2 39874978 39875247 -213381336 - AluSx SINE Alu -13 299 31 3814 127 118 35 chr2 39875247 39876528 -213380055 + pTR5 LTR ERV1 743 2438 0 1888 156 27 0 chr2 39876564 39876859 -213379724 - AluSx SINE Alu -9 303 1 1459 132 12 33 chr2 39877410 39877653 -213378930 + AluJo SINE Alu 72 309 -3 2188 135 7 0 chr2 39877772 39878076 -213378507 + AluSx SINE Alu 1 306 -6 320 355 14 14 chr2 39878171 39878309 -213378274 - L2 LINE L2 -8 3264 3127 1953 170 0 0 chr2 39878442 39878736 -213377847 + AluSx SINE Alu 3 296 -16 2167 247 76 14 chr2 39878760 39879457 -213377126 + L1ME3A LINE L1 5425 6164 -6 2275 112 3 0 chr2 39879522 39879817 -213376766 + AluSx SINE Alu 1 296 -16 315 210 6 182 chr2 39880414 39880590 -213375993 + MIR SINE MIR 62 206 -56 460 82 47 0 chr2 39880691 39880776 -213375807 + CT-rich Low_complexity Low_complexity 3 91 0 7110 61 4 48 chr2 39880777 39882510 -213374073 + SVA Other Other 1 1383 -3 2084 128 7 3 chr2 39882521 39882819 -213373764 + AluSq SINE Alu 1 299 -14 2424 82 0 0 chr2 39882830 39883124 -213373459 + AluSg SINE Alu 1 294 -16 397 225 88 106 chr2 39883144 39883304 -213373279 - L2 LINE L2 -230 3083 2927 1115 86 0 7 chr2 39883308 39883448 -213373135 + AluSx SINE Alu 40 178 -134 1255 161 44 32 chr2 39883456 39883704 -213372879 - MER4E LTR ERV1 -311 468 218 711 139 10 0 chr2 39883705 39883806 -213372777 + AluSq/x SINE Alu 6 107 -205 1345 73 9 2 chr2 39883806 39884038 -213372545 + MER4E LTR ERV1 483 766 0 * 2179 111 99 0 chr2 39884038 39884368 -213372215 - MER1A DNA MER1_type -166 363 1 499 232 7 56 chr2 39884535 39884677 -213371906 + MER69A DNA AcHobo 1 135 -42 832 85 0 0 chr2 39884830 39884936 -213371647 - AluSp/q SINE Alu -9 304 199 180 0 0 0 chr2 39884954 39884974 -213371609 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 336 211 256 0 chr2 39885515 39885630 -213370953 - MIR3 SINE MIR -25 183 39 2451 92 0 0 chr2 39886230 39886533 -213370050 - AluSg SINE Alu -7 303 1 238 330 17 62 chr2 39886735 39886778 -213369805 - L3b LINE CR1 -166 1417 1374 2245 122 0 10 chr2 39886778 39887082 -213369501 - AluSx SINE Alu -11 301 1 238 330 17 62 chr2 39887082 39887214 -213369369 - L3b LINE CR1 -209 1374 1250 2177 108 3 3 chr2 39888191 39888478 -213368105 - AluSx SINE Alu -5 307 21 360 0 0 0 chr2 39888871 39888911 -213367672 + (TTA)n Simple_repeat Simple_repeat 3 42 0 4883 40 2 0 chr2 39888911 39889482 -213367101 - L1PA5 LINE L1 -18 6136 5565 888 211 19 0 chr2 39889482 39889643 -213366940 - FRAM SINE Alu -17 159 1 257 275 193 37 chr2 39889650 39889759 -213366824 - L2 LINE L2 -2 3311 3186 3649 131 23 84 chr2 39889808 39889882 -213366701 + LTR8 LTR ERV1 1 78 -613 2341 103 7 0 chr2 39889882 39890184 -213366399 - AluSp SINE Alu -9 304 1 3649 131 23 84 chr2 39890184 39890844 -213365739 + LTR8 LTR ERV1 78 690 -1 504 281 138 0 chr2 39890961 39891128 -213365455 + MIR SINE MIR 73 262 0 2334 125 0 0 chr2 39891307 39891619 -213364964 + AluSq SINE Alu 1 312 -1 1980 113 29 7 chr2 39891765 39892068 -213364515 - AluSg SINE Alu 0 309 1 2266 56 74 0 chr2 39892470 39892754 -213363829 + AluY SINE Alu 1 305 -6 428 343 89 28 chr2 39893982 39894195 -213362388 - MIR SINE MIR -12 250 25 323 266 150 91 chr2 39894267 39894361 -213362222 + L3 LINE CR1 996 1083 -494 2111 114 10 7 chr2 39894361 39894659 -213361924 - AluSx SINE Alu -13 299 1 323 266 150 91 chr2 39894659 39894850 -213361733 + L3 LINE CR1 1083 1298 -279 235 302 62 10 chr2 39894854 39894950 -213361633 - L2 LINE L2 0 3313 3213 2350 113 0 0 chr2 39895080 39895391 -213361192 - AluSq SINE Alu -2 311 1 483 308 81 0 chr2 39895412 39895610 -213360973 + L3 LINE CR1 1313 1526 -51 252 345 60 17 chr2 39896478 39896594 -213359989 + MIR SINE MIR 16 136 -72 684 201 143 0 chr2 39896614 39896768 -213359815 + MER69A DNA AcHobo 1 176 -1 859 217 95 62 chr2 39896907 39897276 -213359307 + LTR16A1 LTR ERVL 76 456 -1 22 0 0 0 chr2 39897956 39897978 -213358605 + AT_rich Low_complexity Low_complexity 1 22 0 2116 128 7 0 chr2 39897982 39898278 -213358305 + AluSg SINE Alu 1 298 -12 727 168 0 0 chr2 39898278 39898391 -213358192 - AluJo/FLAM SINE Alu -198 114 2 2514 59 0 0 chr2 39898696 39899000 -213357583 + AluY SINE Alu 1 304 -7 2039 130 59 3 chr2 39899443 39899798 -213356785 - THE1C LTR MaLR 0 375 1 2499 59 0 16 chr2 39900561 39900866 -213355717 + AluY SINE Alu 1 300 -11 2164 102 4 0 chr2 39900996 39901271 -213355312 - AluSx SINE Alu -36 276 1 462 103 216 10 chr2 39902542 39902639 -213353944 + L1MD3 LINE L1 7733 7849 -146 1197 107 0 0 chr2 39902641 39902800 -213353783 - AluSg/x SINE Alu -9 301 143 434 221 0 0 chr2 39902900 39902986 -213353597 + L1MD3 LINE L1 7888 7973 -22 1980 117 0 0 chr2 39902986 39903243 -213353340 + AluSx SINE Alu 1 257 -55 378 0 0 0 chr2 39903300 39903342 -213353241 + (TG)n Simple_repeat Simple_repeat 2 43 0 2246 111 3 3 chr2 39903870 39904176 -213352407 + AluSq SINE Alu 1 306 -7 858 128 0 30 chr2 39904183 39904316 -213352267 + FLAM_C SINE Alu 5 133 0 284 239 120 0 chr2 39904402 39904494 -213352089 - MER5A DNA MER1_type -80 109 7 843 143 0 30 chr2 39904857 39904990 -213351593 - FLAM_A SINE Alu -4 129 1 338 290 92 46 chr2 39905881 39906012 -213350571 - MIR3 SINE MIR -62 146 10 2215 137 0 0 chr2 39906135 39906441 -213350142 - AluSx SINE Alu -6 306 1 2306 120 0 16 chr2 39906444 39906761 -213349822 - AluSx SINE Alu 0 312 1 310 279 38 0 chr2 39906921 39907000 -213349583 - L2 LINE L2 -5 3267 3186 1777 158 24 17 chr2 39907284 39907582 -213349001 + AluJb SINE Alu 1 300 -12 225 227 45 15 chr2 39907893 39907959 -213348624 + MARNA DNA Mariner 243 310 -276 1648 136 173 60 chr2 39907984 39908366 -213348217 + MSTA LTR MaLR 4 428 0 1100 203 105 100 chr2 39908581 39908622 -213347961 - MLT2B1 LTR ERVL 0 520 481 246 32 0 0 chr2 39908622 39908653 -213347930 + (TG)n Simple_repeat Simple_repeat 2 32 0 1100 203 105 100 chr2 39908653 39908998 -213347585 - MLT2B1 LTR ERVL -39 481 129 2554 99 117 5 chr2 39908998 39909383 -213347200 - MSTA LTR MaLR 0 428 1 1100 203 105 100 chr2 39909383 39909424 -213347159 - MLT2B1 LTR ERVL -391 129 90 209 239 42 14 chr2 39910284 39910355 -213346228 + T-rich Low_complexity Low_complexity 2 74 0 448 225 9 45 chr2 39910475 39910586 -213345997 - MER5B DNA MER1_type -65 113 7 241 250 132 26 chr2 39910824 39910900 -213345683 - L2 LINE L2 -62 3210 3127 260 237 79 13 chr2 39911153 39911229 -213345354 + MER91C DNA MER1_type 25 105 -35 1537 194 119 22 chr2 39911558 39911918 -213344665 + MSTD LTR MaLR 2 396 0 2467 92 0 0 chr2 39912066 39912371 -213344212 - AluSx SINE Alu -7 305 1 2121 110 7 10 chr2 39914089 39914380 -213342203 - AluSx SINE Alu -14 298 9 2389 107 0 0 chr2 39914597 39914933 -213341650 - AluSg SINE Alu 0 336 1 444 311 126 18 chr2 39915440 39915662 -213340921 + MIR SINE MIR 2 247 -15 398 322 102 75 chr2 39915804 39916341 -213340242 + L2 LINE L2 2693 3263 -9 2499 70 3 0 chr2 39917368 39917670 -213338913 + AluY SINE Alu 3 305 -6 325 325 169 54 chr2 39917869 39918164 -213338419 - L2 LINE L2 -1 3271 2943 379 194 0 0 chr2 39918845 39918907 -213337676 + MER5B DNA MER1_type 1 62 -116 2096 145 3 0 chr2 39918909 39919205 -213337378 + AluSx SINE Alu 1 297 -15 696 186 46 26 chr2 39919213 39919460 -213337123 + MER61A LTR ERV1 1 343 0 426 250 9 52 chr2 39919467 39919583 -213337000 + MER5B DNA MER1_type 63 173 -5 2856 87 0 16 chr2 39920682 39921063 -213335520 + THE1C LTR MaLR 1 375 0 482 279 54 7 chr2 39921063 39921210 -213335373 - MIR3 SINE MIR -34 174 21 263 179 0 36 chr2 39921217 39921273 -213335310 + MER5B DNA MER1_type 1 54 -124 410 357 97 35 chr2 39921576 39922040 -213334543 - L2 LINE L2 -222 3050 2563 2282 108 0 6 chr2 39922082 39922396 -213334187 - AluSx SINE Alu 0 312 1 1158 178 0 17 chr2 39922562 39922792 -213333791 - AluJo SINE Alu 0 312 87 292 265 29 49 chr2 39922795 39922897 -213333686 - AluSg/x SINE Alu -116 186 87 2247 108 0 9 chr2 39923265 39923580 -213333003 - AluSx SINE Alu 0 312 1 1479 132 0 9 chr2 39923748 39923976 -213332607 - AluJo SINE Alu 0 312 87 314 210 4 0 chr2 39923979 39924052 -213332531 - AluJ/monomer SINE Alu -252 51 2 254 330 79 88 chr2 39924105 39924435 -213332148 + L2 LINE L2 2946 3272 0 2170 110 3 0 chr2 39926011 39926321 -213330262 - AluSx SINE Alu -1 311 1 295 322 11 11 chr2 39926729 39926819 -213329764 - L2 LINE L2 -4 3268 3179 721 260 20 20 chr2 39927741 39927945 -213328638 + MIR SINE MIR 47 250 -12 2074 132 0 3 chr2 39928071 39928375 -213328208 - AluSx SINE Alu -9 303 1 253 250 182 45 chr2 39928388 39928520 -213328063 + L2 LINE L2 3164 3313 0 2095 125 0 3 chr2 39929453 39929765 -213326818 - AluSx SINE Alu -1 311 1 1586 158 3 107 chr2 39929780 39930116 -213326467 - AluJo SINE Alu -1 301 1 2128 108 10 3 chr2 39930220 39930527 -213326056 - AluSg SINE Alu 0 310 2 469 298 43 19 chr2 39930875 39931083 -213325500 + L2 LINE L2 3010 3222 -91 284 118 39 0 chr2 39931083 39931134 -213325449 + Alu SINE Alu 245 297 -3 412 204 65 11 chr2 39931138 39931231 -213325352 + L2 LINE L2 3213 3310 -3 892 281 38 32 chr2 39931627 39931968 -213324615 - LTR67 LTR ERVL -2 555 213 744 157 25 57 chr2 39931978 39932137 -213324446 - LTR47A LTR ERVL -4 448 295 310 239 123 65 chr2 39932426 39932581 -213324002 - LTR67 LTR ERVL -392 165 2 3388 156 13 24 chr2 39932653 39933269 -213323314 - L1MB8 LINE L1 0 6178 5570 273 258 52 31 chr2 39933298 39933395 -213323188 - MIR SINE MIR -116 146 48 2355 97 0 0 chr2 39933457 39933767 -213322816 - AluSx SINE Alu -2 310 1 793 226 58 24 chr2 39934041 39934249 -213322334 + MLT1L LTR MaLR 135 349 -266 1823 140 46 35 chr2 39934444 39934815 -213321768 - THE1C LTR MaLR 0 375 1 373 234 0 0 chr2 39935008 39935085 -213321498 + L1MB5 LINE L1 6064 6140 -34 2308 93 0 0 chr2 39935087 39935397 -213321186 + AluSx SINE Alu 1 310 -2 267 189 94 0 chr2 39936588 39936641 -213319942 + MIR SINE MIR 82 139 -69 662 232 156 24 chr2 39936809 39937020 -213319563 - MLT1I LTR MaLR -14 395 157 1795 154 0 0 chr2 39937161 39937441 -213319142 - AluSx SINE Alu -32 280 1 297 75 0 0 chr2 39937557 39937597 -213318986 + (TTA)n Simple_repeat Simple_repeat 2 41 0 648 178 0 23 chr2 39937601 39937730 -213318853 - FLAM_A SINE Alu -9 133 8 2060 122 0 0 chr2 39937817 39938133 -213318450 - AluSx SINE Alu 0 316 1 1476 167 72 0 chr2 39938135 39938398 -213318185 - AluJb SINE Alu -19 293 12 224 396 104 11 chr2 39938477 39938659 -213317924 + L2 LINE L2 2715 2913 -401 597 323 45 0 chr2 39938844 39939042 -213317541 - MIR SINE MIR -3 259 53 701 271 175 23 chr2 39939073 39939220 -213317363 + L1ME4a LINE L1 5290 5413 -708 1608 151 48 4 chr2 39939220 39939491 -213317092 + AluSx SINE Alu 1 283 -29 701 271 175 23 chr2 39939491 39939931 -213316652 + L1ME4a LINE L1 5413 5946 -175 344 153 0 5 chr2 39940049 39940107 -213316476 + AluSc SINE Alu 1 49 -253 1458 76 0 0 chr2 39940107 39940292 -213316291 + AluSc SINE Alu 125 309 0 206 0 0 65 chr2 39941192 39941223 -213315360 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 2357 87 0 0 chr2 39941334 39941643 -213314940 - AluSx SINE Alu -3 309 1 363 300 0 0 chr2 39941855 39941935 -213314648 - L2 LINE L2 -1 3312 3233 1301 217 94 3 chr2 39941948 39942247 -213314336 + MER58B DNA MER1_type 1 326 -15 2180 126 0 0 chr2 39942339 39942648 -213313935 + AluSx SINE Alu 1 309 -3 2307 93 0 0 chr2 39944392 39944731 -213311852 - AluSg SINE Alu 0 310 1 311 291 97 0 chr2 39945115 39945218 -213311365 + L3 LINE CR1 1463 1575 -2 313 248 29 95 chr2 39945921 39946131 -213310452 - L1ME3A LINE L1 -8 6162 5967 690 312 55 3 chr2 39946206 39946498 -213310085 - L1ME3A LINE L1 -219 5951 5645 1780 144 7 16 chr2 39946668 39946973 -213309610 + AluSx SINE Alu 1 302 -10 526 70 28 0 chr2 39947164 39947235 -213309348 + Alu SINE Alu 221 293 -16 455 278 139 12 chr2 39948446 39948619 -213307964 - MIR3 SINE MIR -10 198 4 291 234 203 8 chr2 39948829 39948957 -213307626 - MER112 DNA MER1_type -41 219 67 423 339 0 30 chr2 39949252 39949420 -213307163 - MIR3 SINE MIR -5 203 41 1990 102 26 36 chr2 39949629 39949967 -213306616 - AluY SINE Alu 0 335 1 234 200 18 18 chr2 39949967 39949988 -213306595 + CT-rich Low_complexity Low_complexity 2 56 0 26 0 0 0 chr2 39950048 39950074 -213306509 + AT_rich Low_complexity Low_complexity 1 26 0 801 279 40 47 chr2 39950272 39950594 -213305989 - L2 LINE L2 -50 3263 2944 2166 115 0 3 chr2 39950693 39951006 -213305577 - AluSq SINE Alu -1 312 1 228 346 39 15 chr2 39951227 39951357 -213305226 - L2 LINE L2 -298 2974 2842 1807 152 45 0 chr2 39951379 39951669 -213304914 + AluSx SINE Alu 1 303 -9 228 378 52 41 chr2 39951856 39952126 -213304457 - L2 LINE L2 -580 2734 2462 781 190 6 13 chr2 39952536 39952694 -213303889 + L1MA10 LINE L1 6176 6332 -2 21 36 0 0 chr2 39952841 39952869 -213303714 + AT_rich Low_complexity Low_complexity 1 28 0 190 143 0 29 chr2 39953033 39953068 -213303515 + MIR SINE MIR 107 140 -68 830 119 40 0 chr2 39954004 39954130 -213302453 - FLAM_C SINE Alu -12 131 1 2102 117 0 0 chr2 39954365 39954664 -213301919 + AluSx SINE Alu 1 299 -13 234 224 17 35 chr2 39954670 39954728 -213301855 - L2 LINE L2 -16 3256 3200 281 286 71 43 chr2 39955894 39956034 -213300549 + MIR SINE MIR 73 216 -46 407 213 22 44 chr2 39956311 39956451 -213300132 + (TAGA)n Simple_repeat Simple_repeat 2 139 -41 3396 141 23 95 chr2 39956451 39956726 -213299857 + LTR8 LTR ERV1 1 294 -397 2138 117 0 3 chr2 39956726 39957033 -213299550 + AluSx SINE Alu 1 306 -6 3396 141 23 95 chr2 39957033 39957502 -213299081 + LTR8 LTR ERV1 294 691 0 407 213 22 44 chr2 39957502 39957544 -213299039 + (TAGA)n Simple_repeat Simple_repeat 139 180 0 257 232 0 18 chr2 39957552 39957608 -213298975 - MLT1L LTR MaLR -8 607 553 2316 81 10 3 chr2 39957609 39957918 -213298665 + AluY SINE Alu 1 311 0 473 0 0 17 chr2 39957931 39957989 -213298594 + (GAAA)n Simple_repeat Simple_repeat 2 58 0 283 102 85 34 chr2 39958013 39958153 -213298430 + Alu SINE Alu 247 389 0 367 322 122 9 chr2 39958182 39958412 -213298171 - MLT1L LTR MaLR -110 505 250 439 285 106 17 chr2 39959273 39959586 -213296997 + MLT1K LTR MaLR 184 547 -41 2097 76 47 0 chr2 39959716 39959993 -213296590 + AluY SINE Alu 1 290 -21 242 266 0 0 chr2 39960889 39960953 -213295630 + (CTG)n Simple_repeat Simple_repeat 3 66 0 569 14 14 0 chr2 39961095 39961165 -213295418 + (TAAA)n Simple_repeat Simple_repeat 2 72 0 979 90 0 0 chr2 39961525 39961659 -213294924 - AluSg/x SINE Alu 0 310 177 2205 87 13 0 chr2 39962077 39962377 -213294206 - AluY SINE Alu -7 304 1 2109 128 0 3 chr2 39962737 39963043 -213293540 - AluSx SINE Alu -7 305 1 276 254 164 16 chr2 39964131 39964253 -213292330 - L2 LINE L2 -9 3304 3165 245 246 49 107 chr2 39964357 39964479 -213292104 - L2 LINE L2 -341 2972 2858 2334 87 0 10 chr2 39964701 39965013 -213291570 + AluSg SINE Alu 2 310 0 201 344 135 16 chr2 39965297 39965608 -213290975 + L2 LINE L2 2133 2480 -834 1474 141 79 3 chr2 39965656 39965895 -213290688 - MLT1D LTR MaLR -5 500 258 524 62 0 0 chr2 39965895 39965959 -213290624 + MER39B LTR ERV1 1 64 -589 * 1251 203 54 104 chr2 39965952 39966415 -213290168 + LTR8A LTR ERV1 288 727 0 * 1624 80 8 76 chr2 39966415 39966676 -213289907 + MER39B LTR ERV1 411 653 0 1034 139 100 6 chr2 39966690 39966870 -213289713 - MLT1D LTR MaLR -308 197 1 238 242 48 0 chr2 39966965 39967027 -213289556 + GA-rich Low_complexity Low_complexity 4 68 0 349 279 121 85 chr2 39967228 39967500 -213289083 + L2 LINE L2 2985 3266 -6 186 43 0 0 chr2 39968138 39968161 -213288422 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 28 0 0 0 chr2 39968351 39968379 -213288204 + AT_rich Low_complexity Low_complexity 1 28 0 782 294 92 30 chr2 39968469 39968944 -213287639 - L1ME LINE L1 -389 5775 5265 1492 181 16 41 chr2 39969132 39969276 -213287307 + L1MC1 LINE L1 4964 5110 -1123 1715 159 20 10 chr2 39969276 39969578 -213287005 - AluJb SINE Alu -7 305 1 1492 181 16 41 chr2 39969578 39969981 -213286602 + L1MC1 LINE L1 5110 5486 -747 3010 130 106 20 chr2 39969981 39970521 -213286062 + LTR18B LTR ERVL 1 586 -28 5471 126 6 4 chr2 39970549 39971389 -213285194 + L1MC1 LINE L1 5482 6323 -10 2101 92 7 0 chr2 39971389 39971671 -213284912 + AluY SINE Alu 1 284 -27 289 214 10 51 chr2 39971758 39971856 -213284727 - Charlie7 DNA MER1_type 0 2612 2519 221 343 0 0 chr2 39972348 39972418 -213284165 - MIR3 SINE MIR -25 183 114 1627 145 21 25 chr2 39972548 39972861 -213283722 - AluJo SINE Alu 0 312 1 2078 106 7 3 chr2 39973068 39973369 -213283214 - AluSg SINE Alu -8 302 1 822 226 38 0 chr2 39973583 39973742 -213282841 + MER5A DNA MER1_type 7 171 -18 187 186 23 0 chr2 39973748 39973791 -213282792 + MER5A DNA MER1_type 1 44 -145 1015 200 0 11 chr2 39973933 39974118 -213282465 + AluJo SINE Alu 1 183 -129 1927 98 0 0 chr2 39974245 39974500 -213282083 + AluSx SINE Alu 7 261 -51 1896 134 6 32 chr2 39974564 39974877 -213281706 - AluSx SINE Alu -7 305 1 3443 121 27 38 chr2 39974877 39975545 -213281038 - L1MB2 LINE L1 -340 5831 5171 1689 169 0 7 chr2 39975730 39976026 -213280557 + AluJb SINE Alu 1 294 -18 2113 96 13 16 chr2 39976026 39976339 -213280244 + AluSx SINE Alu 1 312 0 1277 157 42 34 chr2 39976898 39977160 -213279423 + AluJo SINE Alu 44 307 -5 951 207 19 28 chr2 39977251 39977464 -213279119 - MIR SINE MIR -16 246 36 21 36 0 0 chr2 39978194 39978222 -213278361 + AT_rich Low_complexity Low_complexity 1 28 0 268 234 56 56 chr2 39978450 39978557 -213278026 - L1MC5 LINE L1 -426 7535 7429 276 273 112 75 chr2 39978598 39978876 -213277707 - L1MC4a LINE L1 -1456 6352 6065 1881 127 0 3 chr2 39978932 39979215 -213277368 - AluSg SINE Alu -18 292 11 2285 92 0 0 chr2 39979224 39979530 -213277053 - AluSx SINE Alu -6 306 1 2277 236 70 16 chr2 39979532 39980179 -213276404 - L1MC4a LINE L1 -1871 5937 5256 509 275 53 86 chr2 39980216 39980554 -213276029 - L1MC4a LINE L1 -898 5248 4922 231 114 0 0 chr2 39980591 39980626 -213275957 + (CA)n Simple_repeat Simple_repeat 2 36 0 244 270 45 0 chr2 39980626 39980715 -213275868 + L1ME4a LINE L1 5977 6069 -52 221 346 19 10 chr2 39981649 39981753 -213274830 - MIR SINE MIR -112 150 46 348 24 0 0 chr2 39982172 39982213 -213274370 + (TG)n Simple_repeat Simple_repeat 1 41 0 213 39 0 0 chr2 39983855 39983881 -213272702 + (T)n Simple_repeat Simple_repeat 1 26 0 23 33 0 0 chr2 39983888 39983918 -213272665 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 39983929 39983950 -213272633 + AT_rich Low_complexity Low_complexity 1 21 0 6193 14 1 15 chr2 39983963 39984677 -213271906 - L1PA2 LINE L1 -1 6154 5451 1696 125 26 22 chr2 39984870 39985182 -213271401 - AluSp SINE Alu 0 313 1 180 167 56 19 chr2 39986335 39986389 -213270194 + MIR SINE MIR 16 71 -137 339 244 138 48 chr2 39987139 39987308 -213269275 + MIR SINE MIR 38 214 -48 1009 213 74 4 chr2 39987366 39987610 -213268973 + MIR SINE MIR 1 261 -1 220 314 58 25 chr2 39987738 39987859 -213268724 + MIR3 SINE MIR 41 165 -43 198 0 0 0 chr2 39989044 39989066 -213267517 + (A)n Simple_repeat Simple_repeat 1 22 0 575 200 25 0 chr2 39990282 39990402 -213266181 - FLAM_C SINE Alu -20 123 1 1170 304 22 19 chr2 39990431 39990842 -213265741 - LTR16B LTR ERVL 0 464 53 283 167 13 51 chr2 39990905 39990983 -213265600 - L1M4 LINE L1 -913 5233 5159 832 146 29 0 chr2 39990986 39991147 -213265436 - AluJ SINE Alu 0 305 141 2418 119 91 10 chr2 39991147 39991543 -213265040 + MSTA LTR MaLR 1 428 0 823 188 0 0 chr2 39991556 39991689 -213264894 - AluJ SINE Alu -169 133 1 558 298 125 38 chr2 39991690 39992248 -213264335 - L1M4 LINE L1 -981 5165 4657 2265 96 0 3 chr2 39992248 39992551 -213264032 + AluY SINE Alu 1 302 -9 558 298 125 38 chr2 39992551 39992611 -213263972 - L1M4 LINE L1 -1489 4657 4604 1758 155 3 22 chr2 39992611 39992927 -213263656 + AluJo SINE Alu 1 310 -2 558 298 125 38 chr2 39992927 39993116 -213263467 - L1M4 LINE L1 -1542 4604 4287 460 262 139 30 chr2 39994055 39994257 -213262326 + MIR SINE MIR 2 225 -37 407 308 27 20 chr2 39994429 39994575 -213262008 - MIR SINE MIR -58 204 58 676 204 0 72 chr2 39994680 39994847 -213261736 - FRAM SINE Alu -2 174 20 2279 91 0 3 chr2 39995313 39995622 -213260961 - AluY SINE Alu -3 308 1 940 127 0 8 chr2 39996381 39996515 -213260068 - FLAM_C SINE Alu 0 133 1 201 298 165 0 chr2 39996572 39996693 -213259890 - L2 LINE L2 -5 3308 3168 1425 176 37 48 chr2 39996735 39997030 -213259553 - AluJb SINE Alu -19 293 2 641 122 0 0 chr2 39998035 39998125 -213258458 - AluS SINE Alu -221 91 2 23 33 0 0 chr2 39998434 39998464 -213258119 + AT_rich Low_complexity Low_complexity 1 30 0 445 225 0 0 chr2 39998787 39998876 -213257707 + L1M4 LINE L1 4684 4772 -1374 272 278 106 65 chr2 39999750 39999995 -213256588 - L2 LINE L2 -188 3084 2830 332 218 195 23 chr2 40000397 40000535 -213256048 + MIR3 SINE MIR 37 192 -47 1747 167 0 14 chr2 40000569 40000863 -213255720 + AluSx SINE Alu 1 290 -22 2213 109 0 0 chr2 40001126 40001430 -213255153 - AluSx SINE Alu -8 304 1 1538 73 5 0 chr2 40003173 40003377 -213253206 + AluSg/x SINE Alu 101 305 -5 486 249 115 30 chr2 40003440 40003605 -213252978 + MIR SINE MIR 22 200 -62 302 276 35 0 chr2 40003607 40003723 -213252860 + (TA)n Simple_repeat Simple_repeat 2 121 0 1977 134 0 0 chr2 40003856 40004162 -213252421 - AluSg SINE Alu -4 306 1 292 95 0 0 chr2 40004162 40004204 -213252379 - AluSp/q SINE Alu -10 293 252 1732 42 0 5 chr2 40004206 40004420 -213252163 - AluY SINE Alu -98 213 1 298 71 0 0 chr2 40004420 40004462 -213252121 - AluSq SINE Alu -10 293 252 1585 83 0 9 chr2 40004464 40004680 -213251903 - AluSq SINE Alu -99 214 1 577 224 40 40 chr2 40004682 40004883 -213251700 - L1MC5 LINE L1 -32 7929 7729 2233 78 0 3 chr2 40005561 40005845 -213250738 - AluSc SINE Alu -26 283 1 877 145 0 7 chr2 40006542 40006687 -213249896 + AluJo SINE Alu 120 263 -49 25 0 0 0 chr2 40006687 40006712 -213249871 + AT_rich Low_complexity Low_complexity 1 25 0 191 106 77 19 chr2 40006754 40006858 -213249725 + (TA)n Simple_repeat Simple_repeat 2 111 0 234 304 24 40 chr2 40007029 40007154 -213249429 - L1MC/D LINE L1 -1921 5887 5765 270 224 26 13 chr2 40008107 40008183 -213248400 - MER69 DNA AcHobo 0 2526 2450 * 479 226 48 41 chr2 40008180 40008326 -213248257 - MER69 DNA AcHobo -2379 147 1 240 100 0 0 chr2 40008553 40008593 -213247990 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 2232 109 0 0 chr2 40009029 40009341 -213247242 - AluSx SINE Alu 0 312 1 308 335 126 16 chr2 40009584 40009764 -213246819 - MIR SINE MIR -48 214 11 2985 123 9 11 chr2 40009764 40010229 -213246354 + MER4C LTR ERV1 2 465 0 2302 82 6 13 chr2 40010250 40010565 -213246018 - AluSp SINE Alu 0 313 1 539 228 6 100 chr2 40010723 40010903 -213245680 + MER5A DNA MER1_type 21 183 -6 420 236 85 19 chr2 40010914 40011020 -213245563 - MER94 DNA DNA -1 133 21 198 71 0 0 chr2 40011292 40011320 -213245263 + (TC)n Simple_repeat Simple_repeat 1 28 0 234 325 71 0 chr2 40011365 40011519 -213245064 - L1MC5 LINE L1 -536 7425 7261 228 293 75 55 chr2 40011491 40011893 -213244690 - L1MC4 LINE L1 -580 7462 7044 * 1476 125 129 8 chr2 40011893 40012172 -213244411 - AluSg1 SINE Alu 0 309 1 228 293 75 55 chr2 40012172 40012233 -213244350 - L1MC4 LINE L1 -998 7044 6986 270 0 0 0 chr2 40012467 40012497 -213244086 + (T)n Simple_repeat Simple_repeat 1 30 0 1095 112 0 62 chr2 40012690 40012869 -213243714 + AluSq SINE Alu 3 170 -143 302 106 21 0 chr2 40012969 40013016 -213243567 - Alu SINE Alu -255 48 1 625 100 60 0 chr2 40013016 40013116 -213243467 + L1MA2 LINE L1 6199 6304 0 27 0 0 0 chr2 40013190 40013217 -213243366 + AT_rich Low_complexity Low_complexity 1 27 0 1132 243 56 7 chr2 40013401 40013689 -213242894 + LTR16A LTR ERVL 18 319 -131 213 39 0 0 chr2 40013689 40013715 -213242868 + (TTCCC)n Simple_repeat Simple_repeat 2 27 0 217 287 209 0 chr2 40014127 40014242 -213242341 + MIR SINE MIR 108 246 -16 2287 174 8 128 chr2 40014604 40014783 -213241800 + L1MB4 LINE L1 5630 5829 -351 295 172 5 14 chr2 40014783 40014848 -213241735 + AluSx SINE Alu 1 46 -256 2009 117 3 0 chr2 40014848 40015138 -213241445 + AluSx SINE Alu 21 311 -1 2287 174 8 128 chr2 40015138 40015519 -213241064 + L1MB4 LINE L1 5827 6180 0 333 175 88 12 chr2 40015526 40015606 -213240977 + L1MB8 LINE L1 6093 6178 0 619 265 73 39 chr2 40016217 40016477 -213240106 - MER102a DNA MER1_type -1 329 61 1758 147 0 11 chr2 40016588 40016867 -213239716 + AluSx SINE Alu 1 276 -36 775 159 0 23 chr2 40016867 40016999 -213239584 + AluSg/x SINE Alu 174 302 -8 259 236 125 0 chr2 40017407 40017479 -213239104 + MIR SINE MIR 112 192 -70 1620 111 4 0 chr2 40017488 40017713 -213238870 + AluSq SINE Alu 1 226 -87 1074 61 0 8 chr2 40017795 40017927 -213238656 - THE1A LTR MaLR -224 131 1 333 200 46 0 chr2 40017927 40017989 -213238594 - Charlie5 DNA MER1_type -2542 70 6 241 186 257 14 chr2 40017993 40018063 -213238520 + L2 LINE L2 3176 3262 -10 1216 107 0 0 chr2 40018451 40018620 -213237963 + L1PA10 LINE L1 6000 6168 0 268 250 117 78 chr2 40018756 40018884 -213237699 - MIR SINE MIR -3 259 127 2061 136 0 0 chr2 40019036 40019345 -213237238 - AluSx SINE Alu -3 309 1 258 164 149 15 chr2 40019521 40019588 -213236995 - LTR67 LTR ERVL -2 555 480 931 130 86 18 chr2 40020441 40020612 -213235971 - AluSg/x SINE Alu -12 300 128 724 117 10 0 chr2 40021035 40021138 -213235445 - AluSp SINE Alu -209 104 2 3557 131 42 0 chr2 40021280 40021859 -213234724 + LTR26 LTR ERV1 1 603 0 219 269 135 19 chr2 40021962 40022066 -213234517 - L2 LINE L2 -7 3265 3150 2139 120 3 16 chr2 40022616 40022933 -213233650 - AluSq SINE Alu 0 313 1 1026 194 28 5 chr2 40022970 40023181 -213233402 - MER20 DNA MER1_type 0 219 4 694 280 161 54 chr2 40025404 40025850 -213230733 + MLT1K LTR MaLR 3 496 -92 216 0 0 0 chr2 40026172 40026196 -213230387 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 1790 151 0 14 chr2 40026196 40026480 -213230103 - AluJb SINE Alu -32 280 1 1191 202 148 20 chr2 40027125 40027476 -213229107 + MSTD LTR MaLR 1 396 0 820 309 59 53 chr2 40027534 40028428 -213228155 + HAL1 LINE L1 12 911 -1596 290 285 147 33 chr2 40028557 40028998 -213227585 - MLT1L LTR MaLR -10 605 1 2861 119 2 5 chr2 40029235 40029665 -213226918 + L1PA15 LINE L1 5724 6152 -13 2406 51 0 3 chr2 40029897 40030189 -213226394 + AluY SINE Alu 1 291 -20 390 178 178 9 chr2 40030329 40030436 -213226147 + L2 LINE L2 3187 3311 -2 1072 82 7 0 chr2 40031223 40031358 -213225225 + AluY SINE Alu 1 136 -175 2111 114 10 7 chr2 40031987 40032284 -213224299 + AluSx SINE Alu 1 298 -14 247 294 200 0 chr2 40032684 40032769 -213223814 - L3b LINE CR1 -140 1443 1342 297 228 173 0 chr2 40032846 40032956 -213223627 + MIR SINE MIR 10 135 -73 2032 117 57 0 chr2 40033805 40034088 -213222495 - AluSx SINE Alu -13 299 1 1092 186 0 0 chr2 40034666 40034854 -213221729 + MER5A DNA MER1_type 2 189 0 2222 122 0 10 chr2 40035296 40035600 -213220983 + AluSx SINE Alu 1 301 -11 391 214 0 11 chr2 40035630 40035719 -213220864 + MLT1A1 LTR MaLR 1 88 -507 1865 212 71 40 chr2 40035780 40035810 -213220773 - L1ME LINE L1 -381 5785 5757 1576 169 28 31 chr2 40035810 40036100 -213220483 - AluJo SINE Alu -23 289 1 1865 212 71 40 chr2 40036100 40036368 -213220215 - L1ME LINE L1 -409 5757 5499 2022 130 19 19 chr2 40036368 40036675 -213219908 - AluSx SINE Alu -5 307 1 1865 212 71 40 chr2 40036675 40037379 -213219204 - L1ME LINE L1 -667 5499 4749 1250 158 59 4 chr2 40037382 40037635 -213218948 + MLT1A1 LTR MaLR 98 364 -1 1199 161 22 71 chr2 40037638 40037945 -213218638 - L1ME LINE L1 -1432 4714 4422 2097 136 0 13 chr2 40037945 40038261 -213218322 - AluSx SINE Alu 0 312 1 1199 161 22 71 chr2 40038261 40038276 -213218307 - L1ME LINE L1 -1724 4422 4408 953 300 81 44 chr2 40038470 40039133 -213217450 - HAL1 LINE L1 -1602 905 218 779 211 48 14 chr2 40039459 40039606 -213216977 - AluJ SINE Alu -19 293 142 306 233 27 27 chr2 40039606 40039679 -213216904 + FLAM_A SINE Alu 47 119 -14 728 177 15 0 chr2 40039679 40039809 -213216774 - AluJ SINE Alu -170 132 1 639 336 62 17 chr2 40040432 40040673 -213215910 + MIR SINE MIR 11 262 0 330 319 28 7 chr2 40040786 40041071 -213215512 + L1M4 LINE L1 4154 4444 -1702 1713 222 70 13 chr2 40041075 40041530 -213215053 - MLT1E2 LTR MaLR -133 493 13 424 338 185 0 chr2 40041545 40041761 -213214822 + MIR SINE MIR 7 262 0 477 219 189 30 chr2 40041771 40041972 -213214611 - L3 LINE CR1 -737 840 608 300 306 22 60 chr2 40042217 40042351 -213214232 - MIR SINE MIR -111 151 23 815 94 0 19 chr2 40043147 40043253 -213213330 - FLAM_C SINE Alu -18 125 22 1630 176 37 0 chr2 40043358 40043630 -213212953 - AluJb SINE Alu -30 282 1 959 192 0 6 chr2 40043655 40043822 -213212761 + FAM SINE Alu 1 166 -9 410 260 52 38 chr2 40044091 40044254 -213212329 - MIR SINE MIR -63 145 2 1755 145 34 0 chr2 40044573 40044835 -213211748 - AluJo SINE Alu -23 289 19 423 234 175 7 chr2 40045628 40045765 -213210818 - MIR3 SINE MIR -47 161 2 675 166 94 2 chr2 40047061 40047269 -213209314 - L1MB5 LINE L1 0 6180 5958 230 227 61 30 chr2 40048030 40048096 -213208487 + MER5B DNA MER1_type 82 149 -29 617 84 42 0 chr2 40048761 40048856 -213207727 + L1MA8 LINE L1 6128 6226 -65 730 162 17 8 chr2 40049002 40049119 -213207464 + FLAM_C SINE Alu 6 123 -20 2485 59 7 7 chr2 40049212 40049516 -213207067 + AluY SINE Alu 5 308 -3 1087 192 104 38 chr2 40049947 40050432 -213206151 - MER20B DNA MER1_type -61 722 165 27 0 0 0 chr2 40052355 40052382 -213204201 + AT_rich Low_complexity Low_complexity 1 27 0 277 217 56 77 chr2 40052660 40052803 -213203780 + L1MC4a LINE L1 4873 5012 -1134 1824 115 24 0 chr2 40053877 40054129 -213202454 + AluSx SINE Alu 55 312 0 298 269 128 0 chr2 40054165 40054243 -213202340 + L2 LINE L2 3187 3274 -39 1577 161 6 70 chr2 40054910 40055240 -213201343 + AluJo SINE Alu 1 309 -3 371 244 33 46 chr2 40055257 40055432 -213201151 - L1MC4 LINE L1 0 8042 7751 2166 99 3 3 chr2 40055587 40055879 -213200704 + AluSg SINE Alu 16 307 -3 469 296 57 71 chr2 40055945 40056187 -213200396 + L1MC4a LINE L1 5419 5663 -2145 945 119 0 15 chr2 40056187 40056321 -213200262 + FLAM_C SINE Alu 1 132 -1 469 296 57 71 chr2 40056321 40056574 -213200009 + L1MC4a LINE L1 5663 5907 -1901 2131 119 3 41 chr2 40056582 40056901 -213199682 - AluSx SINE Alu -5 307 1 562 233 72 28 chr2 40057095 40057275 -213199308 + MLT1F1 LTR MaLR 32 219 -323 1179 223 16 0 chr2 40057301 40057543 -213199040 + MLT1F1 LTR MaLR 322 567 0 26 0 0 0 chr2 40059243 40059269 -213197314 + AT_rich Low_complexity Low_complexity 1 26 0 292 304 71 9 chr2 40059611 40059723 -213196860 + MIR SINE MIR 33 151 -111 482 282 106 39 chr2 40059745 40060000 -213196583 - L2 LINE L2 0 3313 3042 444 171 0 0 chr2 40060175 40060245 -213196338 - MER44D DNA MER2_type 0 605 536 1709 161 13 26 chr2 40060246 40060551 -213196032 + AluJo SINE Alu 3 303 -9 1175 128 111 4 chr2 40060641 40060876 -213195707 - MER44D DNA MER2_type -79 530 1 234 0 0 0 chr2 40061698 40061724 -213194859 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 21 0 0 0 chr2 40065523 40065544 -213191039 + AT_rich Low_complexity Low_complexity 1 21 0 203 61 30 0 chr2 40066024 40066057 -213190526 + (CA)n Simple_repeat Simple_repeat 2 35 0 483 277 174 96 chr2 40068099 40068546 -213188037 - L3 LINE CR1 -23 1554 1073 267 264 286 14 chr2 40068636 40068776 -213187807 + MIR3 SINE MIR 16 193 -15 828 45 0 27 chr2 40068792 40068937 -213187646 + L1PA3 LINE L1 6040 6155 0 21 71 0 0 chr2 40069209 40069251 -213187332 + AT_rich Low_complexity Low_complexity 1 42 0 2226 94 13 3 chr2 40071797 40072095 -213184488 - AluSc SINE Alu -8 301 1 1548 123 186 4 chr2 40072123 40072376 -213184207 + AluSq SINE Alu 1 299 -14 26 36 0 36 chr2 40073526 40073556 -213183027 + AT_rich Low_complexity Low_complexity 1 30 -23 1665 187 10 3 chr2 40073556 40073845 -213182738 - AluJb SINE Alu -21 291 1 26 36 0 36 chr2 40073845 40073869 -213182714 + AT_rich Low_complexity Low_complexity 30 53 0 27 62 0 0 chr2 40074388 40074436 -213182147 + AT_rich Low_complexity Low_complexity 1 48 0 2287 68 0 0 chr2 40075511 40075791 -213180792 - AluY SINE Alu -16 295 16 251 262 48 0 chr2 40076758 40076842 -213179741 + MIR SINE MIR 175 262 0 2114 134 71 85 chr2 40077241 40077675 -213178908 + MSTA LTR MaLR 1 428 0 2281 100 7 3 chr2 40077753 40078053 -213178530 + AluSg SINE Alu 1 301 -9 528 193 0 12 chr2 40078247 40078330 -213178253 + FLAM_A SINE Alu 2 83 -59 1311 198 21 25 chr2 40080222 40080505 -213176078 + AluJo SINE Alu 16 297 -15 2344 97 0 0 chr2 40081179 40081478 -213175105 + AluSx SINE Alu 1 299 -13 21 57 0 0 chr2 40081591 40081626 -213174957 + AT_rich Low_complexity Low_complexity 1 35 0 1560 129 98 4 chr2 40083103 40083367 -213173216 + AluSg1 SINE Alu 11 299 -10 2186 92 6 16 chr2 40083377 40083691 -213172892 + AluY SINE Alu 1 311 0 575 221 46 119 chr2 40083691 40084052 -213172531 + L1MC4 LINE L1 7646 7981 -61 24 67 0 0 chr2 40084063 40084108 -213172475 + AT_rich Low_complexity Low_complexity 1 45 0 1866 147 35 3 chr2 40084149 40084434 -213172149 + AluSx SINE Alu 1 294 -18 1875 136 19 16 chr2 40084477 40084785 -213171798 + AluSg SINE Alu 1 309 -1 29 0 0 0 chr2 40084963 40084992 -213171591 + AT_rich Low_complexity Low_complexity 1 29 0 2335 69 3 0 chr2 40085045 40085335 -213171248 + AluSx SINE Alu 1 291 -21 1806 152 21 3 chr2 40085750 40086040 -213170543 - AluSx SINE Alu -17 295 1 29 28 0 0 chr2 40086496 40086532 -213170051 + AT_rich Low_complexity Low_complexity 1 36 0 434 283 45 40 chr2 40086685 40086862 -213169721 - L3 LINE CR1 -291 1286 1109 2401 69 3 7 chr2 40087166 40087469 -213169114 - AluSg1 SINE Alu -7 302 1 531 212 22 120 chr2 40087799 40087983 -213168600 + MLT1K LTR MaLR 391 556 -32 185 273 182 0 chr2 40088070 40088136 -213168447 + L2 LINE L2 3230 3307 -6 242 270 81 14 chr2 40089840 40089914 -213166669 - MIR3 SINE MIR -47 161 83 1661 125 6 78 chr2 40089927 40090247 -213166336 + AluJb SINE Alu 1 297 -15 23 0 0 0 chr2 40090782 40090805 -213165778 + AT_rich Low_complexity Low_complexity 1 23 0 27 0 0 0 chr2 40091365 40091392 -213165191 + AT_rich Low_complexity Low_complexity 1 27 0 24 0 0 0 chr2 40091643 40091667 -213164916 + GC_rich Low_complexity Low_complexity 1 24 0 23 54 0 0 chr2 40091935 40091972 -213164611 + GC_rich Low_complexity Low_complexity 1 37 0 237 343 86 0 chr2 40093438 40093543 -213163040 + L2 LINE L2 3155 3268 -4 35 0 0 0 chr2 40093941 40093976 -213162607 + AT_rich Low_complexity Low_complexity 1 35 0 248 304 139 0 chr2 40095373 40095452 -213161131 - L2 LINE L2 -44 3228 3139 483 245 30 114 chr2 40095527 40095680 -213160903 - MIR SINE MIR -31 231 103 1590 181 0 4 chr2 40095680 40095950 -213160633 + AluJb SINE Alu 41 309 -3 483 245 30 114 chr2 40095950 40096033 -213160550 - MIR SINE MIR -159 103 15 1795 167 0 25 chr2 40096131 40096449 -213160134 - AluJo SINE Alu -2 310 1 1946 150 33 0 chr2 40096596 40096896 -213159687 - AluSx SINE Alu -2 310 1 2529 51 0 0 chr2 40097600 40097896 -213158687 - AluY SINE Alu -15 296 1 21 0 0 0 chr2 40097943 40097964 -213158619 + AT_rich Low_complexity Low_complexity 1 21 0 31 26 0 0 chr2 40098006 40098044 -213158539 + AT_rich Low_complexity Low_complexity 1 38 0 2864 61 3 66 chr2 40098656 40098892 -213157691 - THE1A LTR MaLR 0 355 150 2089 138 3 0 chr2 40098892 40099188 -213157395 + AluSx SINE Alu 1 297 -15 2864 61 3 66 chr2 40099188 40099330 -213157253 - THE1A LTR MaLR -205 150 1 305 210 48 0 chr2 40099330 40099392 -213157191 - Charlie5 DNA MER1_type -2542 70 6 244 214 18 18 chr2 40099396 40099452 -213157131 + L2 LINE L2 3176 3231 -41 1272 107 0 0 chr2 40099854 40100023 -213156560 + L1PA10 LINE L1 6000 6168 0 243 250 117 78 chr2 40100159 40100287 -213156296 - MIR SINE MIR -3 259 127 2177 136 0 0 chr2 40100439 40100748 -213155835 - AluSx SINE Alu -3 309 1 265 164 149 15 chr2 40100924 40100991 -213155592 - LTR67 LTR ERVL -2 555 480 932 130 86 19 chr2 40101853 40102015 -213154568 - AluSg/x SINE Alu -12 298 126 691 118 20 10 chr2 40102437 40102539 -213154044 - AluSp SINE Alu -209 104 2 3845 135 42 0 chr2 40102682 40103261 -213153322 + LTR26 LTR ERV1 1 603 0 215 279 135 19 chr2 40103364 40103468 -213153115 - L2 LINE L2 -7 3265 3150 2134 120 3 16 chr2 40104018 40104335 -213152248 - AluSq SINE Alu 0 313 1 1116 194 28 5 chr2 40104372 40104583 -213152000 - MER20B DNA MER1_type 0 219 4 833 278 161 54 chr2 40106805 40107251 -213149332 + MLT1K LTR MaLR 3 496 -92 216 0 0 0 chr2 40107572 40107596 -213148987 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 1789 151 0 14 chr2 40107596 40107880 -213148703 - AluJb SINE Alu -32 280 1 1339 202 148 20 chr2 40108525 40108876 -213147707 + MSTD LTR MaLR 1 396 0 1123 306 59 53 chr2 40108934 40109828 -213146755 + HAL1 LINE L1 12 911 -1596 217 202 0 36 chr2 40110181 40110265 -213146318 + T-rich Low_complexity Low_complexity 4 84 0 237 343 86 0 chr2 40111500 40111605 -213144978 + L2 LINE L2 3155 3268 -4 35 0 0 0 chr2 40112003 40112038 -213144545 + AT_rich Low_complexity Low_complexity 1 35 0 248 304 139 0 chr2 40113435 40113514 -213143069 - L2 LINE L2 -44 3228 3139 497 248 25 113 chr2 40113589 40113742 -213142841 - MIR SINE MIR -31 231 105 1590 181 0 4 chr2 40113742 40114012 -213142571 + AluJb SINE Alu 41 309 -3 497 248 25 113 chr2 40114012 40114096 -213142487 - MIR SINE MIR -157 105 15 1795 167 0 25 chr2 40114194 40114512 -213142071 - AluJo SINE Alu -2 310 1 1946 150 33 0 chr2 40114659 40114959 -213141624 - AluSx SINE Alu -2 310 1 2529 51 0 0 chr2 40115663 40115959 -213140624 - AluY SINE Alu -15 296 1 21 0 0 0 chr2 40116006 40116027 -213140556 + AT_rich Low_complexity Low_complexity 1 21 0 31 26 0 0 chr2 40116069 40116107 -213140476 + AT_rich Low_complexity Low_complexity 1 38 0 2864 61 3 66 chr2 40116719 40116955 -213139628 - THE1A LTR MaLR 0 355 150 2089 138 3 0 chr2 40116955 40117251 -213139332 + AluSx SINE Alu 1 297 -15 2864 61 3 66 chr2 40117251 40117393 -213139190 - THE1A LTR MaLR -205 150 1 305 210 48 0 chr2 40117393 40117455 -213139128 - Charlie5 DNA MER1_type -2542 70 6 244 214 18 18 chr2 40117459 40117515 -213139068 + L2 LINE L2 3176 3231 -41 1272 107 0 0 chr2 40117917 40118086 -213138497 + L1PA10 LINE L1 6000 6168 0 243 250 117 78 chr2 40118222 40118350 -213138233 - MIR SINE MIR -3 259 127 2177 136 0 0 chr2 40118502 40118811 -213137772 - AluSx SINE Alu -3 309 1 265 164 149 15 chr2 40118987 40119054 -213137529 - LTR67 LTR ERVL -2 555 480 932 130 86 19 chr2 40119916 40120078 -213136505 - AluSg/x SINE Alu -12 300 128 758 118 10 0 chr2 40120500 40120602 -213135981 - AluSp SINE Alu -209 104 2 3845 135 42 0 chr2 40120745 40121324 -213135259 + LTR26 LTR ERV1 1 603 0 215 279 135 19 chr2 40121427 40121531 -213135052 - L2 LINE L2 -7 3265 3150 2151 120 3 16 chr2 40122081 40122398 -213134185 - AluSp SINE Alu 0 313 1 1116 194 28 5 chr2 40122435 40122646 -213133937 - MER20B DNA MER1_type 0 219 4 836 280 161 54 chr2 40124869 40125315 -213131268 + MLT1K LTR MaLR 3 496 -92 216 0 0 0 chr2 40125636 40125660 -213130923 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 1810 151 0 14 chr2 40125660 40125944 -213130639 - AluJb SINE Alu -32 280 1 1322 202 148 20 chr2 40126589 40126940 -213129643 + MSTD LTR MaLR 1 396 0 1106 306 59 53 chr2 40126998 40127892 -213128691 + HAL1 LINE L1 12 911 -1596 401 313 170 34 chr2 40128021 40128462 -213128121 - MLT1J LTR MaLR -10 501 1 2929 119 2 5 chr2 40128699 40129129 -213127454 + L1PA15 LINE L1 5724 6152 -13 2465 51 0 3 chr2 40129361 40129653 -213126930 + AluY SINE Alu 1 291 -20 345 182 125 0 chr2 40129812 40129900 -213126683 + L2 LINE L2 3213 3311 -2 2452 75 0 0 chr2 40130687 40130982 -213125601 + AluY SINE Alu 1 295 -16 2167 116 0 7 chr2 40131012 40131313 -213125270 + AluSx SINE Alu 6 304 -8 29 60 0 0 chr2 40131393 40131443 -213125140 + AT_rich Low_complexity Low_complexity 1 50 0 2546 30 40 0 chr2 40131827 40132126 -213124457 - AluY SINE Alu 0 311 1 297 305 0 0 chr2 40132621 40132703 -213123880 - MIR SINE MIR -28 234 153 2340 115 0 3 chr2 40132983 40133296 -213123287 - AluSx SINE Alu 0 312 1 2146 146 24 26 chr2 40134171 40134690 -213121893 - MLT2A2 LTR ERVL 0 554 1 308 229 49 25 chr2 40134989 40135111 -213121472 + MLT1L LTR MaLR 489 613 -2 558 261 23 47 chr2 40135232 40135447 -213121136 - HAL1 LINE L1 -1596 911 702 558 237 85 15 chr2 40135715 40135907 -213120676 - MIR SINE MIR 0 262 55 2225 106 0 0 chr2 40135907 40136217 -213120366 - AluSg SINE Alu 0 310 1 558 237 85 15 chr2 40136217 40136236 -213120347 - MIR SINE MIR -207 55 39 582 263 107 32 chr2 40136243 40136616 -213119967 + L1ME LINE L1 593 993 -5126 750 157 8 22 chr2 40136673 40136807 -213119776 + AluJo SINE Alu 3 134 -178 322 298 8 16 chr2 40136913 40137034 -213119549 + L1ME LINE L1 4025 4144 -1985 25 0 0 0 chr2 40137178 40137203 -213119380 + AT_rich Low_complexity Low_complexity 1 25 0 1888 161 62 4 chr2 40137289 40137711 -213118872 - MLT1D LTR MaLR 0 505 1 1898 159 7 0 chr2 40137739 40138041 -213118542 - AluJb SINE Alu -8 304 1 480 295 66 19 chr2 40138042 40138300 -213118283 + L1ME LINE L1 4492 4761 -1368 276 245 75 32 chr2 40138531 40138625 -213117958 + L1ME3A LINE L1 5985 6082 -88 2186 120 0 20 chr2 40138642 40138942 -213117641 - AluSx SINE Alu -18 294 1 27 0 0 0 chr2 40139252 40139279 -213117304 + AT_rich Low_complexity Low_complexity 1 27 0 355 313 30 0 chr2 40139330 40139461 -213117122 + L1ME LINE L1 5512 5646 -458 235 185 37 0 chr2 40139858 40139912 -213116671 - HsTC2 DNA Tc2 -1842 56 1 2200 96 4 0 chr2 40140020 40140343 -213116240 - AluSx SINE Alu 0 324 1 593 280 108 21 chr2 40140424 40140813 -213115770 - L1MC4a LINE L1 -1689 6119 5697 2498 55 0 0 chr2 40140964 40141254 -213115329 + AluY SINE Alu 4 293 -18 2208 139 4 18 chr2 40141272 40141656 -213114927 - L1PA16 LINE L1 -3 6165 5811 1498 177 45 15 chr2 40142807 40143073 -213113510 - AluJo SINE Alu -27 285 12 1956 162 0 0 chr2 40143435 40143737 -213112846 + AluJb SINE Alu 5 306 -6 585 175 167 0 chr2 40144208 40144322 -213112261 + FLAM_C SINE Alu 1 133 0 1264 103 185 13 chr2 40144327 40144559 -213112024 + MSTA LTR MaLR 157 428 0 2463 57 7 0 chr2 40144797 40145096 -213111487 + AluY SINE Alu 1 301 -10 652 167 26 22 chr2 40145105 40145223 -213111360 + GA-rich Low_complexity Low_complexity 1 117 -423 2334 71 6 6 chr2 40145223 40145534 -213111049 + AluY SINE Alu 1 311 0 652 167 26 22 chr2 40145534 40145643 -213110940 + GA-rich Low_complexity Low_complexity 117 540 0 26 30 0 0 chr2 40145879 40145912 -213110671 + AT_rich Low_complexity Low_complexity 1 33 0 203 283 0 9 chr2 40146330 40146436 -213110147 + GA-rich Low_complexity Low_complexity 3 107 0 2330 84 3 0 chr2 40146921 40147218 -213109365 + AluSx SINE Alu 1 298 -14 1171 136 57 4 chr2 40147722 40147950 -213108633 + L1MA8 LINE L1 6029 6268 -23 65 0 0 0 chr2 40147985 40148050 -213108533 + AT_rich Low_complexity Low_complexity 1 65 0 2159 107 0 0 chr2 40148052 40148333 -213108250 + AluSx SINE Alu 11 291 -21 2202 123 0 0 chr2 40148334 40148664 -213107919 + AluSx SINE Alu 1 312 0 429 249 87 44 chr2 40148780 40149074 -213107509 + L1ME3A LINE L1 5590 5891 -230 570 176 130 0 chr2 40149101 40149209 -213107374 + FLAM_A SINE Alu 1 122 -11 263 121 17 0 chr2 40149241 40149299 -213107284 + (TA)n Simple_repeat Simple_repeat 1 59 0 709 113 0 0 chr2 40149442 40149539 -213107044 + AluS SINE Alu 2 98 -214 1158 124 12 0 chr2 40149539 40149700 -213106883 - AluSq SINE Alu -140 173 11 4098 126 19 76 chr2 40149818 40151147 -213105436 - pTR5 LTR ERV1 0 2468 1524 2486 90 0 0 chr2 40151738 40152050 -213104533 - AluSq SINE Alu -1 312 1 1016 171 13 31 chr2 40152392 40152620 -213103963 + L1MB8 LINE L1 5955 6178 0 2627 40 0 3 chr2 40152630 40152933 -213103650 + AluY SINE Alu 1 302 -9 1885 110 62 4 chr2 40153079 40153352 -213103231 + AluSq SINE Alu 2 290 -23 438 273 57 106 chr2 40153515 40153852 -213102731 + MLT1J LTR MaLR 118 437 -74 2381 91 3 0 chr2 40153852 40154150 -213102433 - AluSp SINE Alu -14 299 1 438 273 57 106 chr2 40154150 40154179 -213102404 + MLT1J LTR MaLR 437 466 -45 1852 142 62 0 chr2 40154229 40154518 -213102065 + AluJb SINE Alu 1 307 -5 2443 96 0 0 chr2 40155014 40155326 -213101257 + AluSx SINE Alu 1 312 0 3347 129 2 4 chr2 40155517 40156013 -213100570 - LOR1a LTR ERV1 -2 495 1 1809 140 0 0 chr2 40156619 40156884 -213099699 + AluSx SINE Alu 37 301 -11 1982 120 40 7 chr2 40157104 40157404 -213099179 - AluSx SINE Alu -2 310 1 234 256 233 30 chr2 40158515 40158648 -213097935 + MIR SINE MIR 10 169 -93 201 278 19 0 chr2 40158947 40159001 -213097582 - MER5A DNA MER1_type -5 184 130 2490 76 3 0 chr2 40159008 40159310 -213097273 + AluSp SINE Alu 1 303 -10 2127 130 7 0 chr2 40159320 40159627 -213096956 + AluSq SINE Alu 1 309 -4 2193 126 0 0 chr2 40159635 40159936 -213096647 + AluSx SINE Alu 1 301 -11 1192 198 118 1 chr2 40159967 40160371 -213096212 + LTR54 LTR ERV1 1 466 -32 1629 170 14 54 chr2 40160371 40160499 -213096084 + AluJo SINE Alu 1 133 -179 1890 141 16 29 chr2 40160499 40160805 -213095778 - AluJo SINE Alu -10 302 1 1629 170 14 54 chr2 40160805 40160970 -213095613 + AluJo SINE Alu 133 282 -30 2603 238 50 26 chr2 40160990 40161668 -213094915 + MER21B LTR ERV1 63 756 -107 1476 178 29 61 chr2 40162414 40162791 -213093792 - MLT1A1 LTR MaLR 0 365 1 685 241 114 93 chr2 40163790 40163985 -213092598 + MLT1J LTR MaLR 1 190 -321 2184 134 0 0 chr2 40163985 40164298 -213092285 + AluSq SINE Alu 1 313 0 685 241 114 93 chr2 40164298 40164488 -213092095 + MLT1J LTR MaLR 190 394 -117 1103 234 107 26 chr2 40164517 40164825 -213091758 + LTR40c LTR ERVL 45 377 -88 681 280 78 69 chr2 40164835 40165285 -213091298 - L1ME3A LINE L1 -222 5948 5495 383 204 154 37 chr2 40165288 40165450 -213091133 - L2 LINE L2 -2 3311 3131 2124 108 56 0 chr2 40165453 40165607 -213090976 - AluSx SINE Alu -8 304 160 2179 89 28 0 chr2 40165607 40165898 -213090685 - AluSx SINE Alu -9 303 5 2124 108 56 0 chr2 40165898 40166031 -213090552 - AluSx SINE Alu -152 160 1 345 274 118 37 chr2 40166297 40166432 -213090151 + MIR SINE MIR 31 176 -86 290 308 111 0 chr2 40166522 40166639 -213089944 - MIR SINE MIR -112 150 21 257 258 0 30 chr2 40166674 40166740 -213089843 - L2 LINE L2 -4 3309 3246 324 306 102 0 chr2 40166890 40166998 -213089585 + L2 LINE L2 3148 3266 -6 2145 123 7 0 chr2 40167175 40167477 -213089106 + AluSx SINE Alu 1 304 -8 1905 141 0 4 chr2 40167550 40167851 -213088732 - AluSx SINE Alu 0 312 13 1633 202 0 0 chr2 40167924 40168216 -213088367 + AluJo SINE Alu 1 292 -20 26 0 0 67 chr2 40168217 40168240 -213088343 + AT_rich Low_complexity Low_complexity 1 21 -21 2123 98 7 3 chr2 40168240 40168526 -213088057 + AluSg SINE Alu 1 287 -23 26 0 0 67 chr2 40168526 40168547 -213088036 + AT_rich Low_complexity Low_complexity 21 42 0 2154 106 18 0 chr2 40168555 40168839 -213087744 + AluSx SINE Alu 1 289 -23 1999 155 0 16 chr2 40169163 40169335 -213087248 - AluJb SINE Alu -7 305 139 2378 79 7 0 chr2 40169335 40169625 -213086958 - AluSq SINE Alu -21 292 1 1999 155 0 16 chr2 40169625 40169762 -213086821 - AluJb SINE Alu -173 139 1 2096 110 3 30 chr2 40170135 40170436 -213086147 - AluSx SINE Alu -19 293 1 533 294 29 0 chr2 40171336 40171506 -213085077 + MER5A DNA MER1_type 1 175 -14 2205 42 7 88 chr2 40171967 40172298 -213084285 - AluY SINE Alu 0 306 1 206 278 167 0 chr2 40173682 40173736 -213082847 - L2 LINE L2 -76 3196 3134 1527 96 0 10 chr2 40174023 40174232 -213082351 + AluSg/x SINE Alu 82 288 -24 398 88 0 35 chr2 40174288 40174345 -213082238 - AluSq/x SINE Alu -150 152 98 1174 93 6 0 chr2 40174345 40174506 -213082077 + AluSg/x SINE Alu 134 295 -17 2017 125 93 63 chr2 40174508 40174846 -213081737 + MER39 LTR ERV1 258 611 -96 917 185 0 12 chr2 40174846 40175008 -213081575 - FRAM SINE Alu -6 160 1 2017 125 93 63 chr2 40175008 40175068 -213081515 + MER39 LTR ERV1 611 668 -39 272 98 24 0 chr2 40175174 40175215 -213081368 - Alu SINE Alu -261 42 1 701 235 266 11 chr2 40175256 40175477 -213081106 - L2 LINE L2 -2304 1010 847 1935 130 0 7 chr2 40175477 40175770 -213080813 + AluJb SINE Alu 1 291 -21 701 235 266 11 chr2 40175770 40175901 -213080682 - L2 LINE L2 -2467 847 568 1784 256 106 20 chr2 40176198 40176737 -213079846 + MLT1G1 LTR MaLR 1 585 -10 225 0 0 0 chr2 40176854 40176879 -213079704 + (T)n Simple_repeat Simple_repeat 1 25 0 189 114 86 0 chr2 40176974 40177009 -213079574 - MIR SINE MIR -7 255 218 1504 151 37 37 chr2 40177066 40177364 -213079219 - AluJb SINE Alu -14 298 1 2171 114 3 0 chr2 40177502 40177801 -213078782 - AluSq SINE Alu -13 300 1 2198 102 0 0 chr2 40177811 40178104 -213078479 - AluSg1 SINE Alu -16 293 1 22 35 0 0 chr2 40178651 40178680 -213077903 + AT_rich Low_complexity Low_complexity 1 29 0 2218 106 3 0 chr2 40178795 40179106 -213077477 + AluSx SINE Alu 1 312 0 1959 122 7 7 chr2 40179157 40179453 -213077130 + AluJo SINE Alu 1 296 -16 256 193 55 128 chr2 40179521 40179593 -213076990 + MIR SINE MIR 72 135 -127 1914 133 3 7 chr2 40179593 40179887 -213076696 + AluSx SINE Alu 1 293 -19 256 193 55 128 chr2 40179887 40179923 -213076660 + MIR SINE MIR 135 172 -90 360 0 0 0 chr2 40179947 40179987 -213076596 + (CA)n Simple_repeat Simple_repeat 2 41 0 2161 101 3 0 chr2 40180027 40180325 -213076258 - AluSp SINE Alu -14 299 1 1141 144 6 0 chr2 40180422 40180596 -213075987 - FAM SINE Alu 0 175 1 830 291 38 8 chr2 40181267 40181504 -213075079 + MIR SINE MIR 18 261 -1 261 270 27 115 chr2 40181506 40181561 -213075022 + MIR SINE MIR 1 59 -203 1933 142 17 0 chr2 40181561 40181863 -213074720 + AluJb SINE Alu 1 307 -5 261 270 27 115 chr2 40181863 40181955 -213074628 + MIR SINE MIR 59 135 -127 1782 209 26 28 chr2 40181959 40182428 -213074155 + L1 LINE L1 2173 2640 -3506 2129 103 7 0 chr2 40182781 40183073 -213073510 + AluSx SINE Alu 1 294 -18 267 171 26 92 chr2 40183101 40183177 -213073406 + MIR SINE MIR 184 254 -8 694 231 154 14 chr2 40183199 40183372 -213073211 - MIR SINE MIR 0 262 50 1828 157 3 7 chr2 40183372 40183671 -213072912 - AluJo SINE Alu -13 299 2 694 231 154 14 chr2 40183671 40183718 -213072865 - MIR SINE MIR -212 50 11 290 211 215 81 chr2 40185002 40185225 -213071358 + L3 LINE CR1 594 846 -731 501 287 8 0 chr2 40185274 40185403 -213071180 + MIR SINE MIR 84 213 -49 933 123 0 37 chr2 40185418 40185605 -213070978 + (ATGGTG)n Simple_repeat Simple_repeat 1 180 0 278 204 0 0 chr2 40185641 40185690 -213070893 - MIR SINE MIR -211 51 3 185 367 0 13 chr2 40185736 40185815 -213070768 + L3 LINE CR1 869 946 -631 2241 87 0 3 chr2 40185833 40186131 -213070452 + AluSx SINE Alu 1 297 -15 2277 99 0 0 chr2 40186245 40186548 -213070035 + AluSq SINE Alu 6 308 -5 878 135 0 0 chr2 40186589 40186715 -213069868 + FLAM_C SINE Alu 1 126 -17 286 345 192 0 chr2 40186719 40186896 -213069687 + L3 LINE CR1 1178 1388 -189 367 253 167 37 chr2 40187017 40187179 -213069404 + MER5A DNA MER1_type 7 189 0 2025 96 45 3 chr2 40188540 40188832 -213067751 - AluY SINE Alu -5 306 3 245 256 15 19 chr2 40188868 40188956 -213067627 + MER5A DNA MER1_type 33 126 -62 1453 144 44 72 chr2 40188960 40189142 -213067441 - AluJo SINE Alu 0 312 126 363 23 0 0 chr2 40189142 40189186 -213067397 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 1853 125 4 0 chr2 40189196 40189468 -213067115 - AluSx SINE Alu -39 273 1 1453 144 44 72 chr2 40189468 40189594 -213066989 - AluJo SINE Alu -195 117 2 403 307 159 64 chr2 40189640 40190402 -213066181 + L2 LINE L2 1791 2624 -690 753 188 0 16 chr2 40190418 40190546 -213066037 - FLAM_A SINE Alu -7 126 1 1628 143 49 18 chr2 40190615 40190901 -213065682 - AluJo SINE Alu -17 295 1 1236 403 27 0 chr2 40190991 40191284 -213065299 + AluSg SINE Alu 1 301 -9 757 143 84 0 chr2 40191335 40191454 -213065129 - MER96 DNA MER1_type? -12 163 35 251 300 128 39 chr2 40191611 40191791 -213064792 + L2 LINE L2 3073 3268 -4 1331 186 23 30 chr2 40192432 40192733 -213063850 - AluJo SINE Alu -13 299 1 981 181 0 6 chr2 40192751 40192933 -213063650 + FRAM SINE Alu 1 175 -1 1814 149 3 13 chr2 40193051 40193390 -213063193 - AluSx SINE Alu 0 312 1 440 310 29 46 chr2 40193508 40193682 -213062901 - MIR3 SINE MIR -8 200 30 2346 87 6 0 chr2 40193715 40194026 -213062557 + AluSp SINE Alu 1 313 0 351 0 0 0 chr2 40194027 40194066 -213062517 + (TA)n Simple_repeat Simple_repeat 2 40 0 356 133 0 112 chr2 40194077 40194150 -213062433 - AluSg/x SINE Alu -114 186 130 271 86 0 35 chr2 40194170 40194228 -213062355 + (TA)n Simple_repeat Simple_repeat 1 56 0 37 23 0 0 chr2 40194750 40194794 -213061789 + AT_rich Low_complexity Low_complexity 1 44 0 192 271 17 0 chr2 40194973 40195032 -213061551 - L2 LINE L2 0 3313 3254 23 33 0 0 chr2 40195223 40195253 -213061330 + AT_rich Low_complexity Low_complexity 1 30 0 3487 166 22 17 chr2 40196089 40196868 -213059715 + L1M2 LINE L1 2536 3325 -3523 2003 129 7 3 chr2 40196868 40197163 -213059420 + AluSx SINE Alu 1 296 -16 3487 166 22 17 chr2 40197163 40197434 -213059149 + L1M2 LINE L1 3325 3593 -3255 640 176 23 8 chr2 40197453 40197584 -213058999 - FLAM_C SINE Alu 0 133 1 595 178 8 34 chr2 40197818 40197936 -213058647 - FRAM SINE Alu -61 115 1 267 153 17 0 chr2 40197936 40197995 -213058588 + MER39 LTR ERV1 609 668 -39 733 103 71 48 chr2 40198241 40198400 -213058183 + FLAM_C SINE Alu 1 133 0 1631 194 154 26 chr2 40198690 40199119 -213057464 + LTR2B LTR ERV1 7 490 0 1917 116 39 0 chr2 40199189 40199473 -213057110 + AluSc SINE Alu 2 296 -13 186 43 0 0 chr2 40199474 40199497 -213057086 + (T)n Simple_repeat Simple_repeat 1 23 0 1827 100 4 4 chr2 40199497 40199747 -213056836 - AluSx SINE Alu -62 250 1 293 272 96 52 chr2 40200052 40200188 -213056395 + MIR3 SINE MIR 24 165 -43 1547 122 146 36 chr2 40200864 40201200 -213055383 - THE1C LTR MaLR -2 373 1 1882 133 20 0 chr2 40201297 40201597 -213054986 + AluJb SINE Alu 5 310 -2 239 291 73 18 chr2 40201731 40201841 -213054742 + L2 LINE L2 3197 3312 -1 1143 213 30 0 chr2 40202137 40202342 -213054241 + MIR SINE MIR 20 234 -28 1785 104 4 12 chr2 40202342 40202601 -213053982 + AluSq SINE Alu 35 291 -22 1143 213 30 0 chr2 40202601 40202630 -213053953 + MIR SINE MIR 234 261 -1 324 230 59 82 chr2 40203127 40203156 -213053427 + L1MC4a LINE L1 5797 5825 -1983 2118 51 0 29 chr2 40203156 40203431 -213053152 + AluY SINE Alu 45 311 0 324 230 59 82 chr2 40203431 40203536 -213053047 + L1MC4a LINE L1 5825 5928 -1880 772 184 5 70 chr2 40203704 40203775 -213052808 + MER53 DNA DNA 2 76 -113 2288 75 7 0 chr2 40203775 40204069 -213052514 - AluSc SINE Alu -11 298 3 772 184 5 70 chr2 40204069 40204198 -213052385 + MER53 DNA DNA 76 189 0 594 239 0 0 chr2 40204366 40204475 -213052108 + MER44D DNA MER2_type 5 383 -226 1980 126 0 0 chr2 40204478 40204763 -213051820 + AluSx SINE Alu 3 287 -25 344 266 45 71 chr2 40204812 40204966 -213051617 + HAL1b LINE L1 1198 1347 -1 2380 56 7 3 chr2 40205102 40205127 -213051456 - AluY SINE Alu -5 306 283 414 0 0 0 chr2 40205127 40205173 -213051410 + (TG)n Simple_repeat Simple_repeat 1 46 0 2380 56 7 3 chr2 40205173 40205452 -213051131 - AluY SINE Alu -28 283 1 183 266 319 18 chr2 40205984 40206064 -213050519 - MIR SINE MIR -56 206 151 2173 113 0 0 chr2 40206064 40206375 -213050208 + AluSx SINE Alu 1 311 -1 183 266 319 18 chr2 40206375 40206407 -213050176 - MIR SINE MIR -111 151 60 2112 99 24 0 chr2 40207601 40207893 -213048690 - AluSp SINE Alu -14 299 1 215 179 0 167 chr2 40208510 40208566 -213048017 + MIR SINE MIR 35 76 -186 2175 115 0 0 chr2 40208566 40208870 -213047713 - AluSx SINE Alu -8 304 1 215 179 0 167 chr2 40208870 40208891 -213047692 + MIR SINE MIR 76 99 -163 240 230 230 22 chr2 40208976 40209040 -213047543 + MIR SINE MIR 92 141 -121 321 181 28 14 chr2 40209040 40209112 -213047471 + MER116 DNA Mariner 5 77 -3 240 230 230 22 chr2 40209112 40209182 -213047401 + MIR SINE MIR 141 254 -8 498 285 145 9 chr2 40209268 40209489 -213047094 + MIR SINE MIR 6 256 -6 1781 166 0 22 chr2 40209592 40209905 -213046678 - AluJb SINE Alu -6 306 1 270 272 218 27 chr2 40209953 40210100 -213046483 - MIR3 SINE MIR -1 207 33 1840 145 21 0 chr2 40210437 40210727 -213045856 + AluSx SINE Alu 1 296 -16 191 214 0 24 chr2 40211552 40211594 -213044989 + MIR SINE MIR 17 57 -151 295 310 97 71 chr2 40211846 40212198 -213044385 - L3 LINE CR1 -1102 475 115 2142 114 3 0 chr2 40212198 40212497 -213044086 + AluSq SINE Alu 1 300 -13 1233 144 16 98 chr2 40212938 40213156 -213043427 - MER46A DNA MER2_type -2495 236 40 2291 85 0 0 chr2 40213156 40213450 -213043133 - AluSq SINE Alu -19 294 1 1233 144 16 98 chr2 40213450 40213487 -213043096 - MER46A DNA MER2_type -2691 40 2 840 131 0 15 chr2 40213976 40214106 -213042477 + AluJo/FLAM SINE Alu 3 130 -172 1783 164 3 3 chr2 40214108 40214420 -213042163 + AluSx SINE Alu 1 312 0 1227 225 75 36 chr2 40214510 40214870 -213041713 - MLT1L LTR MaLR -144 471 98 2092 99 20 3 chr2 40215292 40215596 -213040987 - AluSx SINE Alu -3 309 1 2273 60 3 0 chr2 40215804 40216147 -213040436 - AluY SINE Alu 0 344 1 993 196 91 0 chr2 40216165 40216374 -213040209 + L1ME2 LINE L1 5703 5930 -234 2061 125 0 3 chr2 40217011 40217314 -213039269 + AluSx SINE Alu 1 302 -10 2206 112 0 0 chr2 40217513 40217809 -213038774 + AluSx SINE Alu 1 296 -16 2279 78 3 0 chr2 40217815 40218110 -213038473 + AluSp SINE Alu 3 298 -15 301 208 0 0 chr2 40218116 40218164 -213038419 - MER20 DNA MER1_type -170 49 2 265 257 110 59 chr2 40218364 40218395 -213038188 - MIR3 SINE MIR -27 181 153 2253 81 3 13 chr2 40218395 40218703 -213037880 - AluSp SINE Alu -8 305 1 265 257 110 59 chr2 40218703 40218807 -213037776 - MIR3 SINE MIR -55 153 39 1106 186 70 8 chr2 40219504 40219746 -213036837 + L1MD3 LINE L1 7739 7995 0 861 87 0 0 chr2 40219773 40219888 -213036695 + AluJb SINE Alu 1 115 -197 30 83 0 0 chr2 40219888 40219960 -213036623 + AT_rich Low_complexity Low_complexity 1 72 0 1560 167 29 14 chr2 40220040 40220316 -213036267 - AluJb SINE Alu -32 280 1 1754 139 7 20 chr2 40220980 40221274 -213035309 + AluJo SINE Alu 2 291 -21 21 0 0 0 chr2 40221308 40221329 -213035254 + AT_rich Low_complexity Low_complexity 1 21 0 888 130 0 0 chr2 40221997 40222128 -213034455 - FLAM_C SINE Alu -6 137 7 250 242 121 100 chr2 40222232 40222463 -213034120 - L2 LINE L2 -99 3173 2938 2136 131 0 0 chr2 40222784 40223096 -213033487 + AluSx SINE Alu 1 312 0 626 291 0 17 chr2 40223262 40223434 -213033149 - MIR SINE MIR -76 186 18 1566 172 28 7 chr2 40223489 40223779 -213032804 + AluJo SINE Alu 2 297 -15 198 240 0 0 chr2 40224076 40224126 -213032457 + GA-rich Low_complexity Low_complexity 4 53 0 2365 71 0 3 chr2 40224198 40224508 -213032075 + AluY SINE Alu 1 309 -2 843 152 7 0 chr2 40224724 40224862 -213031721 + AluJb SINE Alu 1 139 -173 239 0 0 31 chr2 40224882 40224914 -213031669 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 2036 97 0 17 chr2 40225257 40225582 -213031001 - AluSx SINE Alu 0 320 1 2266 94 3 0 chr2 40225704 40226002 -213030581 - AluSq SINE Alu -14 299 1 996 175 16 5 chr2 40226006 40226195 -213030388 - AluJo SINE Alu -2 310 120 830 160 0 0 chr2 40226219 40226350 -213030233 - FLAM_C SINE Alu -7 136 6 2314 101 0 0 chr2 40226365 40226673 -213029910 - AluSx SINE Alu -4 308 1 1787 137 4 4 chr2 40227534 40227804 -213028779 - AluSx SINE Alu -19 293 24 890 124 0 16 chr2 40228364 40228493 -213028090 - FLAM_C SINE Alu -5 128 2 2199 98 0 0 chr2 40228510 40228797 -213027786 - AluSq SINE Alu -26 287 1 1061 85 55 0 chr2 40228846 40229010 -213027573 - L1MA5 LINE L1 -3 6297 6125 556 47 0 0 chr2 40229110 40229174 -213027409 + AluSq/x SINE Alu 62 125 -187 362 207 259 16 chr2 40229174 40229367 -213027216 + L2 LINE L2 1032 1271 -2043 440 307 48 7 chr2 40229828 40229974 -213026609 + MIR3 SINE MIR 41 193 -15 189 338 59 0 chr2 40230062 40230130 -213026453 - L2 LINE L2 -44 3228 3157 1931 166 43 98 chr2 40230158 40230477 -213026106 + MER65C LTR ERV1 1 336 -125 1815 150 3 10 chr2 40230477 40230790 -213025793 + AluJo SINE Alu 1 311 -1 1931 166 43 98 chr2 40230790 40230894 -213025689 + MER65C LTR ERV1 336 396 -65 2045 129 3 0 chr2 40230894 40231189 -213025394 - AluSx SINE Alu -16 296 1 1931 166 43 98 chr2 40231189 40231252 -213025331 + MER65C LTR ERV1 396 461 0 1627 173 0 4 chr2 40232224 40232501 -213024082 + AluJb SINE Alu 2 277 -35 213 39 0 0 chr2 40232510 40232536 -213024047 + (CA)n Simple_repeat Simple_repeat 2 27 0 433 156 0 0 chr2 40232551 40232615 -213023968 + FRAM/FAM SINE Alu 13 76 -100 1888 130 27 3 chr2 40232678 40232977 -213023606 - AluSx SINE Alu 0 312 7 2548 29 3 0 chr2 40233188 40233496 -213023087 - AluYa5 SINE Alu -2 309 1 1957 104 50 0 chr2 40233598 40233876 -213022707 + AluSq SINE Alu 1 292 -21 2083 112 0 0 chr2 40233920 40234206 -213022377 + AluSx SINE Alu 17 302 -10 2147 108 7 0 chr2 40234417 40234724 -213021859 + AluSg SINE Alu 1 309 -1 2193 99 3 0 chr2 40235082 40235375 -213021208 + AluSx SINE Alu 1 294 -18 1959 96 44 0 chr2 40235385 40235686 -213020897 + AluSx SINE Alu 1 313 0 752 203 0 0 chr2 40235992 40236125 -213020458 + MER2 DNA MER2_type 4 136 -209 1094 172 24 10 chr2 40236168 40236333 -213020250 - AluJb SINE Alu -20 292 122 186 71 0 0 chr2 40236333 40236361 -213020222 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1094 172 24 10 chr2 40236361 40236404 -213020179 - AluJb SINE Alu -190 122 81 214 311 16 0 chr2 40237171 40237232 -213019351 + L2 LINE L2 3206 3267 -5 2096 104 0 0 chr2 40237257 40237535 -213019048 - AluSg SINE Alu -32 278 1 2086 112 10 0 chr2 40237609 40237905 -213018678 + AluSq SINE Alu 1 299 -14 1864 140 0 10 chr2 40237910 40238217 -213018366 + AluSx SINE Alu 1 304 -8 1128 138 6 0 chr2 40238217 40238391 -213018192 + AluSg/x SINE Alu 134 308 -4 637 122 0 57 chr2 40238983 40239083 -213017500 - AluSg/x SINE Alu -7 302 209 1781 103 0 4 chr2 40239083 40239326 -213017257 - AluSq SINE Alu -71 242 1 637 122 0 57 chr2 40239326 40239348 -213017235 - AluSg/x SINE Alu -100 209 187 1810 151 10 3 chr2 40239607 40239906 -213016677 + AluJo SINE Alu 1 301 -11 2118 117 0 0 chr2 40239907 40240206 -213016377 + AluSx SINE Alu 1 299 -13 2146 84 40 0 chr2 40241085 40241382 -213015201 + AluSc SINE Alu 1 309 0 236 137 0 78 chr2 40241383 40241434 -213015149 - LTR9 LTR ERV1 -131 481 435 187 221 13 78 chr2 40241950 40242027 -213014556 - L2 LINE L2 -1 3271 3200 368 192 39 58 chr2 40242057 40242161 -213014422 - L1MC4a LINE L1 -467 7341 7240 2213 125 60 165 chr2 40242329 40242517 -213014066 + LTR42 LTR ERVL 1 207 -288 1844 91 0 60 chr2 40242517 40242802 -213013781 + AluSq SINE Alu 1 268 -45 437 87 29 0 chr2 40242806 40242875 -213013708 + Alu SINE Alu 240 310 0 2213 125 60 165 chr2 40242875 40243166 -213013417 + LTR42 LTR ERVL 210 495 0 1943 97 0 78 chr2 40243402 40243721 -213012862 + AluSx SINE Alu 1 294 -18 2093 97 7 0 chr2 40243949 40244237 -213012346 + AluSg1 SINE Alu 2 291 -18 321 185 15 0 chr2 40244256 40244321 -213012262 - Tigger8 DNA MER2_type -432 234 169 290 253 65 113 chr2 40244582 40244654 -213011929 + L1M4 LINE L1 25 99 -6443 684 187 0 43 chr2 40244654 40244793 -213011790 - FLAM_A SINE Alu 0 133 1 290 253 65 113 chr2 40244793 40244949 -213011634 + L1M4 LINE L1 99 242 -6300 317 331 88 6 chr2 40245198 40245358 -213011225 + L1M4 LINE L1 716 888 -5654 964 191 12 6 chr2 40245395 40245563 -213011020 + FAM SINE Alu 1 169 -6 1593 221 139 51 chr2 40245581 40245627 -213010956 + L1M4 LINE L1 1305 1346 -5479 1998 135 0 0 chr2 40245627 40245923 -213010660 + AluSx SINE Alu 1 296 -16 1593 221 139 51 chr2 40245923 40245983 -213010600 + L1M4 LINE L1 1346 1399 -5426 1650 126 30 15 chr2 40245983 40246254 -213010329 + AluSx SINE Alu 1 275 -37 204 67 0 0 chr2 40246258 40246288 -213010295 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 1593 221 139 51 chr2 40246288 40246994 -213009589 + L1M4 LINE L1 1401 2324 -4501 2313 90 0 0 chr2 40246994 40247293 -213009290 + AluSc SINE Alu 1 299 -10 1593 221 139 51 chr2 40247293 40247449 -213009134 + L1M4 LINE L1 2324 2465 -4360 22 35 0 0 chr2 40247506 40247535 -213009048 + AT_rich Low_complexity Low_complexity 1 29 0 967 114 0 0 chr2 40247535 40247667 -213008916 + AluSq/x SINE Alu 1 132 -180 2197 97 7 0 chr2 40247669 40247968 -213008615 + AluSp SINE Alu 1 301 -12 305 265 163 96 chr2 40248220 40248270 -213008313 - MER5B DNA MER1_type 0 178 133 1482 157 60 8 chr2 40248270 40248538 -213008045 + AluJb SINE Alu 6 287 -25 305 265 163 96 chr2 40248538 40248653 -213007930 - MER5B DNA MER1_type -45 133 2 750 246 86 12 chr2 40248907 40249151 -213007432 - MER58B DNA MER1_type 0 341 80 1490 151 39 18 chr2 40249152 40249436 -213007147 + AluJo SINE Alu 1 290 -22 2068 94 11 0 chr2 40249444 40249731 -213006852 + AluSx SINE Alu 1 290 -22 411 272 201 6 chr2 40249732 40249901 -213006682 + L1MC/D LINE L1 5429 5630 -2178 954 110 19 26 chr2 40250001 40250156 -213006427 - AluSg/x SINE Alu -18 292 139 29 0 0 0 chr2 40250160 40250189 -213006394 + AT_rich Low_complexity Low_complexity 1 29 0 1853 120 7 17 chr2 40252339 40252639 -213003944 + AluSx SINE Alu 1 297 -15 306 258 0 0 chr2 40254051 40254113 -213002470 + FRAM/FAM SINE Alu 1 59 -107 1407 167 70 11 chr2 40255200 40255470 -213001113 + AluJb SINE Alu 6 291 -21 21 89 0 0 chr2 40257471 40257527 -212999056 + GC_rich Low_complexity Low_complexity 1 56 0 22 56 0 0 chr2 40257876 40257912 -212998671 + GC_rich Low_complexity Low_complexity 1 36 0 1648 160 14 3 chr2 40258412 40258699 -212997884 + AluSx SINE Alu 12 301 -11 430 189 15 152 chr2 40258793 40258925 -212997658 + MLT2B1 LTR ERVL 351 520 0 255 208 97 0 chr2 40258928 40259000 -212997583 - L1ME LINE L1 -250 5871 5793 345 270 181 93 chr2 40259096 40259169 -212997414 - L1ME LINE L1 -607 5514 5449 2253 83 3 0 chr2 40259169 40259459 -212997124 + AluY SINE Alu 1 291 -20 1922 134 10 0 chr2 40259469 40259767 -212996816 + AluSg SINE Alu 1 301 -9 345 270 181 93 chr2 40259767 40259908 -212996675 - L1ME LINE L1 -680 5441 5269 1029 136 0 7 chr2 40260053 40260208 -212996375 - AluSx SINE Alu -15 295 142 572 103 0 0 chr2 40260220 40260298 -212996285 - AluSx SINE Alu -234 79 2 851 162 7 13 chr2 40260366 40260520 -212996063 - AluJb SINE Alu -78 234 82 55 45 0 0 chr2 40260754 40260820 -212995763 + GC_rich Low_complexity Low_complexity 1 66 0 2138 86 3 3 chr2 40262762 40263053 -212993530 + AluSx SINE Alu 1 291 -21 2164 76 4 0 chr2 40263146 40263423 -212993160 + AluSp SINE Alu 1 278 -35 2180 74 9 40 chr2 40263425 40263748 -212992835 + AluSq SINE Alu 1 313 0 711 156 0 8 chr2 40263886 40264008 -212992575 + FLAM_C SINE Alu 12 132 -11 22 0 0 0 chr2 40264521 40264543 -212992040 + AT_rich Low_complexity Low_complexity 1 22 0 1904 136 23 3 chr2 40264917 40265219 -212991364 - AluSx SINE Alu -4 308 1 10602 31 11 85 chr2 40265231 40266722 -212989861 - SVA Other Other -1 1385 5 195 42 0 0 chr2 40266722 40266746 -212989837 + (GGGAGA)n Simple_repeat Simple_repeat 2 25 0 729 162 8 0 chr2 40267175 40267292 -212989291 + FLAM_C SINE Alu 1 118 -15 22 0 0 0 chr2 40267292 40267314 -212989269 + AT_rich Low_complexity Low_complexity 1 22 0 2128 88 3 3 chr2 40267314 40267634 -212988949 - AluSp SINE Alu 0 320 1 631 194 31 16 chr2 40267690 40267819 -212988764 + FLAM_C SINE Alu 3 133 -10 992 186 75 91 chr2 40267898 40268205 -212988378 - AluJo SINE Alu 0 302 1 1949 101 51 3 chr2 40268212 40268508 -212988075 - AluSg SINE Alu 0 310 1 6299 140 36 35 chr2 40368582 40369339 -212887244 - Tigger2 DNA MER2_type -1608 1110 350 2452 86 0 3 chr2 40369339 40369643 -212886940 - AluSp SINE Alu -10 303 1 6299 140 36 35 chr2 40369643 40369994 -212886589 - Tigger2 DNA MER2_type -2368 350 1 1822 146 18 7 chr2 40370284 40370564 -212886019 - AluSx SINE Alu -29 283 1 227 232 89 0 chr2 40370606 40370662 -212885921 - L1ME LINE L1 -377 5789 5729 1545 113 113 31 chr2 40370819 40371076 -212885507 + AluJo SINE Alu 25 302 -10 1292 267 129 49 chr2 40371245 40371794 -212884789 - L2 LINE L2 0 3313 2708 891 165 0 0 chr2 40371794 40371927 -212884656 - FLAM_C SINE Alu 0 133 1 1292 267 129 49 chr2 40371927 40372017 -212884566 - L2 LINE L2 -605 2708 2627 520 246 30 51 chr2 40372037 40372273 -212884310 - L1MC4a LINE L1 -1907 5901 5671 1233 61 0 0 chr2 40372482 40372629 -212883954 + AluSg/x SINE Alu 156 302 -10 198 0 0 0 chr2 40372629 40372651 -212883932 + (TA)n Simple_repeat Simple_repeat 2 23 0 198 0 0 0 chr2 40372651 40372673 -212883910 + (T)n Simple_repeat Simple_repeat 1 22 0 774 277 115 64 chr2 40373087 40373600 -212882983 + HAL1 LINE L1 145 683 -1824 668 63 11 32 chr2 40373707 40373802 -212882781 - L1PA14 LINE L1 -203 5958 5866 2075 130 27 43 chr2 40373803 40373988 -212882595 - L1MB1 LINE L1 -43 6125 5947 2195 99 33 3 chr2 40373988 40374290 -212882293 - AluSq SINE Alu -2 311 1 2075 130 27 43 chr2 40374290 40374474 -212882109 - L1MB1 LINE L1 -221 5947 5762 403 96 0 0 chr2 40374485 40374537 -212882046 + L1M3 LINE L1 5611 5662 -506 887 95 95 15 chr2 40374537 40374674 -212881909 + AluSg SINE Alu 1 148 -162 577 172 0 0 chr2 40374674 40374767 -212881816 - L1MB1 LINE L1 -420 5748 5656 498 74 0 37 chr2 40374767 40374848 -212881735 - Alu SINE Alu -2 310 233 1103 214 93 43 chr2 40375038 40375318 -212881265 - AluJo SINE Alu -8 294 1 1944 137 10 13 chr2 40375878 40376191 -212880392 + AluJb SINE Alu 1 312 0 358 150 0 0 chr2 40376461 40376521 -212880062 - MER21A LTR ERV1 -355 576 517 1415 176 26 4 chr2 40376523 40376795 -212879788 + AluSx SINE Alu 1 278 -34 1341 183 11 18 chr2 40376899 40377183 -212879400 - L1MB1 LINE L1 -821 5325 5044 * 1955 169 0 27 chr2 40377180 40377552 -212879031 + L1M4 LINE L1 3761 4122 -2024 297 194 28 0 chr2 40377556 40377628 -212878955 + L1M4 LINE L1 5173 5246 -900 2516 138 30 8 chr2 40377629 40378026 -212878557 - MER73 LTR ERVL 0 644 239 957 179 22 48 chr2 40378066 40378133 -212878450 + L1M4 LINE L1 5254 5321 -853 2297 91 0 3 chr2 40378133 40378430 -212878153 + AluSx SINE Alu 1 296 -16 957 179 22 48 chr2 40378430 40378591 -212877992 + L1M4 LINE L1 5321 5476 -698 1686 67 62 0 chr2 40378600 40378825 -212877758 - L1PA10 LINE L1 -11 6157 5919 423 289 33 0 chr2 40378932 40379053 -212877530 + L2 LINE L2 2192 2316 -998 292 180 0 16 chr2 40379059 40379120 -212877463 + L2 LINE L2 2625 2684 -630 616 249 6 65 chr2 40379140 40379309 -212877274 + MER91A DNA MER1_type 13 171 -25 830 301 102 10 chr2 40379345 40379890 -212876693 + L2 LINE L2 2715 3312 -1 825 111 0 0 chr2 40379970 40380078 -212876505 + FLAM_C SINE Alu 1 108 -35 1997 108 7 3 chr2 40380090 40380376 -212876207 + Tigger3(Golem) DNA MER2_type 2604 2890 -139 333 246 59 34 chr2 40381172 40381290 -212875293 - MIR SINE MIR -60 148 28 995 142 261 43 chr2 40381640 40381893 -212874690 + AluJb SINE Alu 1 308 -4 1487 142 87 36 chr2 40382362 40382637 -212873946 + AluJb SINE Alu 1 289 -23 1728 167 18 4 chr2 40383042 40383318 -212873265 + AluJb SINE Alu 20 299 -13 8806 114 50 26 chr2 40383326 40383366 -212873217 - Tigger2 DNA MER2_type -151 2567 2529 2174 131 0 6 chr2 40383366 40383678 -212872905 - AluSx SINE Alu 0 312 3 8806 114 50 26 chr2 40383678 40385042 -212871541 - Tigger2 DNA MER2_type -189 2529 1129 1087 104 0 0 chr2 40385155 40385299 -212871284 + AluSg/x SINE Alu 152 295 -15 1720 111 43 8 chr2 40386085 40386338 -212870245 + AluSg SINE Alu 34 295 -15 2132 133 7 0 chr2 40386367 40386668 -212869915 - AluSq SINE Alu -10 303 1 1905 135 4 0 chr2 40387053 40387334 -212869249 - AluSp SINE Alu -11 302 21 2166 105 0 16 chr2 40387865 40388170 -212868413 - AluSc SINE Alu -9 300 1 1499 176 12 46 chr2 40388312 40388495 -212868088 - AluJo SINE Alu 0 312 143 207 69 0 0 chr2 40388495 40388524 -212868059 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1499 176 12 46 chr2 40388524 40388663 -212867920 - AluJo SINE Alu -169 143 1 1477 201 44 0 chr2 40389050 40389348 -212867235 - AluJb SINE Alu -1 311 1 198 182 23 0 chr2 40389380 40389424 -212867159 - MIR SINE MIR -32 230 186 269 320 12 35 chr2 40389816 40389988 -212866595 + GA-rich Low_complexity Low_complexity 4 171 0 228 139 0 0 chr2 40390003 40390046 -212866537 - Alu SINE Alu -256 43 1 1557 91 5 5 chr2 40390216 40390425 -212866158 + AluSc SINE Alu 99 307 -2 204 40 0 0 chr2 40390559 40390584 -212865999 + (CA)n Simple_repeat Simple_repeat 2 26 0 2148 101 27 7 chr2 40391291 40391587 -212864996 + AluSg1 SINE Alu 1 302 -7 2303 106 0 0 chr2 40391630 40391922 -212864661 + AluSx SINE Alu 1 292 -20 989 133 170 0 chr2 40391922 40392087 -212864496 + AluY SINE Alu 1 193 -118 339 49 0 0 chr2 40392187 40392228 -212864355 - AluY SINE Alu -260 41 1 232 160 20 0 chr2 40392232 40392282 -212864301 + L1MC5 LINE L1 7701 7751 -210 2066 120 6 35 chr2 40392282 40392599 -212863984 + AluSx SINE Alu 1 308 -4 261 0 0 0 chr2 40392599 40392628 -212863955 + (TA)n Simple_repeat Simple_repeat 2 30 0 1809 164 14 0 chr2 40392735 40393028 -212863555 + AluSq SINE Alu 1 297 -16 2460 56 0 34 chr2 40394293 40394613 -212861970 + AluSq SINE Alu 1 309 -4 1055 179 26 0 chr2 40394758 40394953 -212861630 - MER41C LTR ERV1 0 554 355 1383 126 0 0 chr2 40395082 40395272 -212861311 + AluSg/x SINE Alu 108 297 -13 297 191 45 0 chr2 40395450 40395539 -212861044 - L1ME4a LINE L1 -12 6109 6017 2214 108 3 19 chr2 40395666 40395981 -212860602 + AluSq SINE Alu 3 312 -1 1209 87 7 0 chr2 40395982 40396163 -212860420 + AluSg/x SINE Alu 130 311 0 891 171 33 0 chr2 40396169 40396321 -212860262 + FRAM SINE Alu 10 166 -10 1667 149 25 16 chr2 40396430 40396751 -212859832 - MER33 DNA MER1_type 0 324 1 899 112 0 0 chr2 40397238 40397363 -212859220 + FRAM SINE Alu 41 165 -11 274 253 11 53 chr2 40397363 40397458 -212859125 - L1ME2 LINE L1 -140 6024 5934 1139 259 98 51 chr2 40397520 40398052 -212858531 - LTR67 LTR ERVL 0 557 1 1737 181 3 16 chr2 40398275 40398584 -212857999 + AluJo SINE Alu 1 305 -7 306 219 32 89 chr2 40399308 40399431 -212857152 - MIR SINE MIR -70 192 77 1087 68 0 0 chr2 40399914 40400046 -212856537 - AluSp/q SINE Alu -4 309 178 459 146 135 0 chr2 40400159 40400248 -212856335 + MER3 DNA MER1_type 109 209 0 231 232 71 0 chr2 40400597 40400653 -212855930 - L3 LINE CR1 -3 1574 1515 248 225 4 0 chr2 40400776 40400832 -212855751 + MIR SINE MIR 63 121 -87 657 183 75 0 chr2 40400909 40401029 -212855554 - FLAM_A SINE Alu -2 131 3 2089 127 0 0 chr2 40401054 40401361 -212855222 - AluSx SINE Alu 0 307 1 2540 169 4 15 chr2 40402105 40402572 -212854011 + L1MB7 LINE L1 5723 6184 0 1205 199 40 43 chr2 40402816 40403093 -212853490 - AluJo SINE Alu -12 300 25 2021 143 0 7 chr2 40403554 40403855 -212852728 - AluSx SINE Alu -13 299 1 2208 93 4 0 chr2 40405194 40405473 -212851110 + AluSg SINE Alu 1 280 -30 2396 89 6 13 chr2 40405612 40405926 -212850657 + AluSp SINE Alu 1 312 -1 180 0 0 0 chr2 40405968 40405988 -212850595 + (A)n Simple_repeat Simple_repeat 1 20 0 2488 73 7 0 chr2 40406000 40406301 -212850282 + AluSp SINE Alu 1 303 -10 1470 92 5 10 chr2 40406304 40406436 -212850147 + AluSg SINE Alu 1 133 -177 2430 67 10 0 chr2 40406436 40406736 -212849847 + AluSp SINE Alu 1 303 -10 1470 92 5 10 chr2 40406736 40406798 -212849785 + AluSg SINE Alu 133 194 -116 1145 189 31 4 chr2 40406970 40407229 -212849354 + AluSq SINE Alu 40 305 -8 414 268 39 62 chr2 40409244 40409423 -212847160 - MIR SINE MIR -6 256 82 300 314 118 44 chr2 40409606 40409902 -212846681 + L2 LINE L2 2587 2904 -410 2144 123 3 10 chr2 40409911 40410219 -212846364 - AluSx SINE Alu -6 306 1 1002 161 51 46 chr2 40410339 40410556 -212846027 - MER20 DNA MER1_type 0 219 2 1579 155 61 37 chr2 40410583 40410880 -212845703 + AluJb SINE Alu 1 304 -8 1397 138 14 9 chr2 40411028 40411246 -212845337 + AluJb SINE Alu 83 301 -11 29 0 0 0 chr2 40411583 40411612 -212844971 + AT_rich Low_complexity Low_complexity 1 29 0 1935 127 7 14 chr2 40411626 40411910 -212844673 - AluSg SINE Alu -27 283 2 1918 149 0 16 chr2 40412307 40412616 -212843967 - AluJo SINE Alu -8 304 1 1547 101 5 0 chr2 40412643 40412842 -212843741 + AluSg/x SINE Alu 89 288 -22 1822 161 10 33 chr2 40413529 40413834 -212842749 - AluJb SINE Alu -14 298 1 27 45 0 45 chr2 40414964 40414999 -212841584 + AT_rich Low_complexity Low_complexity 1 33 -31 1686 166 0 55 chr2 40414999 40415307 -212841276 - AluJo SINE Alu -21 291 1 27 45 0 45 chr2 40415307 40415338 -212841245 + AT_rich Low_complexity Low_complexity 33 64 0 21 82 0 0 chr2 40415540 40415589 -212840994 + AT_rich Low_complexity Low_complexity 1 49 0 2070 129 13 10 chr2 40415957 40416267 -212840316 + AluSx SINE Alu 1 311 -1 2132 133 3 0 chr2 40416833 40417133 -212839450 + AluSx SINE Alu 1 301 -11 255 179 0 0 chr2 40417296 40417335 -212839248 + Alu SINE Alu 3 41 -259 541 104 13 0 chr2 40417399 40417476 -212839107 + AluS SINE Alu 2 79 -234 1329 83 0 0 chr2 40417477 40417646 -212838937 + AluSc SINE Alu 138 306 -3 2744 135 17 43 chr2 40417854 40418314 -212838269 + LTR26 LTR ERV1 1 448 -155 2183 106 0 3 chr2 40418315 40418608 -212837975 + AluSq SINE Alu 1 292 -21 2844 26 0 0 chr2 40418622 40418956 -212837627 + AluY SINE Alu 1 334 0 1306 166 14 0 chr2 40419272 40419495 -212837088 + AluJo SINE Alu 87 312 0 217 352 9 19 chr2 40419569 40419674 -212836909 - MER5B DNA MER1_type -74 104 1 280 333 88 10 chr2 40419814 40420006 -212836577 - L2 LINE L2 -1037 2277 2071 1772 171 7 0 chr2 40420147 40420434 -212836149 - AluSx SINE Alu -23 289 1 385 222 155 77 chr2 40420434 40420608 -212835975 - MIR SINE MIR 0 262 68 1850 144 26 10 chr2 40420608 40420914 -212835669 + AluJo SINE Alu 1 311 -1 385 222 155 77 chr2 40420914 40420946 -212835637 - MIR SINE MIR -194 68 40 246 167 0 0 chr2 40420999 40421035 -212835548 + U2 snRNA snRNA 1 36 -152 653 208 23 8 chr2 40421124 40421254 -212835329 - FLAM_C SINE Alu -1 132 1 213 237 163 44 chr2 40422209 40422344 -212834239 + L2 LINE L2 2919 3069 -203 2291 113 0 0 chr2 40422889 40423189 -212833394 + AluSg SINE Alu 1 300 -10 399 246 58 22 chr2 40423411 40423549 -212833034 + MIR SINE MIR 38 180 -82 2057 116 18 0 chr2 40423665 40423974 -212832609 + AluSx SINE Alu 1 314 0 317 276 0 31 chr2 40424881 40424979 -212831604 + MIR SINE MIR 91 185 -77 1028 256 54 67 chr2 40425231 40425654 -212830929 + MLT1J LTR MaLR 3 456 -55 185 346 45 38 chr2 40425908 40426041 -212830542 + MIR SINE MIR 83 216 -46 21 0 0 0 chr2 40426538 40426559 -212830024 + AT_rich Low_complexity Low_complexity 1 21 0 1038 170 18 0 chr2 40426688 40426853 -212829730 + AluJb SINE Alu 137 304 -8 484 297 61 65 chr2 40427691 40427937 -212828646 + MIR SINE MIR 12 256 -6 1044 133 0 0 chr2 40427997 40428140 -212828443 - FRAM SINE Alu -14 162 20 302 299 146 47 chr2 40428142 40428443 -212828140 + L1ME4a LINE L1 3366 3696 -2450 1967 144 23 3 chr2 40428451 40428750 -212827833 + AluSx SINE Alu 1 305 -7 419 330 113 35 chr2 40428867 40429344 -212827239 + L1ME4a LINE L1 5291 5749 -372 2193 114 10 0 chr2 40429344 40429643 -212826940 + AluSx SINE Alu 1 302 -10 419 330 113 35 chr2 40429643 40429730 -212826853 + L1ME4a LINE L1 5749 5828 -293 23 0 0 0 chr2 40429902 40429925 -212826658 + AT_rich Low_complexity Low_complexity 1 23 0 824 187 0 7 chr2 40429970 40430109 -212826474 - FLAM_C SINE Alu -4 139 2 1242 56 0 0 chr2 40430457 40430599 -212825984 - AluSq/x SINE Alu -171 142 1 195 100 0 0 chr2 40430717 40430747 -212825836 + (CA)n Simple_repeat Simple_repeat 2 31 0 2296 80 0 10 chr2 40430801 40431102 -212825481 - AluY SINE Alu -13 298 1 2387 105 0 0 chr2 40431104 40431417 -212825166 - AluSq SINE Alu 0 313 1 652 170 107 0 chr2 40432322 40432434 -212824149 - FLAM_A SINE Alu -9 124 1 209 345 130 17 chr2 40432981 40433158 -212823425 - L2 LINE L2 -822 2492 2296 322 337 110 57 chr2 40433293 40433628 -212822955 - L2 LINE L2 -2 3270 2918 201 241 0 0 chr2 40434016 40434070 -212822513 + GA-rich Low_complexity Low_complexity 2 55 0 791 218 19 32 chr2 40434155 40434371 -212822212 + L2 LINE L2 3101 3313 0 309 298 124 54 chr2 40434477 40434903 -212821680 + L1 LINE L1 4943 5398 -748 22 0 0 0 chr2 40434949 40434971 -212821612 + AT_rich Low_complexity Low_complexity 1 22 0 2473 58 7 7 chr2 40436869 40437179 -212819404 + AluY SINE Alu 2 311 0 683 216 111 28 chr2 40437394 40437575 -212819008 + MIR SINE MIR 3 198 -64 246 128 0 0 chr2 40437581 40437620 -212818963 + (CTA)n Simple_repeat Simple_repeat 3 41 0 242 254 45 0 chr2 40437822 40437889 -212818694 - L2 LINE L2 0 3313 3244 2226 117 0 0 chr2 40437951 40438251 -212818332 + AluSx SINE Alu 1 300 -12 301 254 113 132 chr2 40438318 40438629 -212817954 - MLT1L LTR MaLR -92 452 115 2089 121 7 3 chr2 40438773 40439078 -212817505 + AluSq SINE Alu 1 306 -7 482 230 0 0 chr2 40439096 40439183 -212817400 + MER21B LTR ERV1 329 415 -448 627 188 9 9 chr2 40439191 40439303 -212817280 - AluSp/q SINE Alu -13 300 189 1696 109 0 4 chr2 40439438 40439667 -212816916 - AluSp SINE Alu -85 228 1 2130 124 0 10 chr2 40439679 40439986 -212816597 - AluSg SINE Alu -6 304 1 858 168 8 0 chr2 40439992 40440123 -212816460 - FLAM_C SINE Alu 0 133 2 194 200 0 0 chr2 40440228 40440263 -212816320 - MER5A DNA MER1_type 0 189 155 755 239 39 6 chr2 40440352 40440532 -212816051 - MER5A DNA MER1_type 0 189 4 2003 115 35 0 chr2 40440756 40441043 -212815540 + AluSx SINE Alu 1 297 -15 1013 142 7 13 chr2 40441710 40441865 -212814718 - FRAM SINE Alu -13 163 10 1931 127 28 3 chr2 40441876 40442160 -212814423 - AluSg SINE Alu -19 291 1 2325 93 0 7 chr2 40442299 40442601 -212813982 - AluSp SINE Alu -13 300 1 791 269 108 29 chr2 40442644 40442923 -212813660 - AluSx SINE Alu -1 301 1 819 200 30 32 chr2 40442923 40443152 -212813431 - L1M4 LINE L1 -694 5484 5252 1892 95 0 4 chr2 40443152 40443393 -212813190 + AluSc SINE Alu 1 240 -69 819 200 30 32 chr2 40443393 40443463 -212813120 - L1M4 LINE L1 -926 5252 5183 263 28 28 0 chr2 40443463 40443499 -212813084 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1206 190 60 19 chr2 40443502 40443771 -212812812 - AluJo SINE Alu -30 282 3 676 128 154 17 chr2 40443784 40443901 -212812682 - FLAM_C SINE Alu 0 133 1 775 135 0 0 chr2 40444029 40444133 -212812450 + AluSg/x SINE Alu 191 294 -15 213 298 53 0 chr2 40444165 40444222 -212812361 + L2 LINE L2 3180 3239 -33 1784 135 36 4 chr2 40444254 40444535 -212812048 + AluSx SINE Alu 1 290 -22 23 33 0 0 chr2 40445514 40445544 -212811039 + AT_rich Low_complexity Low_complexity 1 30 0 2289 162 26 26 chr2 40445668 40446094 -212810489 + L1MA7 LINE L1 5861 6286 -5 1608 177 0 23 chr2 40446154 40446453 -212810130 + AluJo SINE Alu 1 292 -20 265 371 59 18 chr2 40446528 40446698 -212809885 - L2 LINE L2 -188 3084 2908 204 40 0 0 chr2 40447386 40447411 -212809172 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 296 285 53 18 chr2 40447944 40448057 -212808526 - MIR SINE MIR -87 121 15 2560 46 0 52 chr2 40448077 40448402 -212808181 + AluY SINE Alu 1 308 -3 381 212 24 0 chr2 40448701 40448786 -212807797 + MIR3 SINE MIR 81 167 -41 771 291 62 14 chr2 40448908 40449197 -212807386 - L2 LINE L2 0 3313 3011 210 365 47 28 chr2 40450187 40450294 -212806289 - L2 LINE L2 -10 3262 3154 1369 122 0 0 chr2 40450667 40450856 -212805727 + AluSq SINE Alu 1 189 -124 859 153 31 6 chr2 40450958 40451121 -212805462 + L1PA13 LINE L1 5992 6158 -5 192 111 0 0 chr2 40451773 40451809 -212804774 + (A)n Simple_repeat Simple_repeat 1 36 0 181 321 0 0 chr2 40451945 40452001 -212804582 - L2 LINE L2 -1 3312 3257 2006 131 0 0 chr2 40452079 40452385 -212804198 + AluSx SINE Alu 1 306 0 552 262 120 6 chr2 40452909 40453092 -212803491 + MIR SINE MIR 2 205 -57 839 163 0 23 chr2 40453889 40454018 -212802565 - FLAM_C SINE Alu -7 126 1 2694 144 23 56 chr2 40454197 40454711 -212801872 - L1MB7 LINE L1 -8 6176 5680 260 118 39 0 chr2 40454741 40454792 -212801791 - L1MB7 LINE L1 -479 5699 5647 221 200 147 13 chr2 40455077 40455152 -212801431 + MER5A DNA MER1_type 38 122 -67 485 244 107 124 chr2 40455251 40455903 -212800680 + HAL1 LINE L1 972 1612 -895 1779 155 10 0 chr2 40455946 40456237 -212800346 + AluJb SINE Alu 13 306 -6 823 115 0 58 chr2 40456259 40456398 -212800185 + FLAM_C SINE Alu 11 141 -2 261 0 0 0 chr2 40456714 40456743 -212799840 + (TTTAA)n Simple_repeat Simple_repeat 2 30 0 1201 68 0 6 chr2 40456743 40456894 -212799689 - AluYa5 SINE Alu -8 303 152 210 264 97 0 chr2 40456966 40457038 -212799545 + L2 LINE L2 2937 3015 -257 282 344 92 0 chr2 40457043 40457174 -212799409 + MIR SINE MIR 3 145 -117 255 170 0 0 chr2 40459054 40459101 -212797482 + GA-rich Low_complexity Low_complexity 3 49 0 1462 147 0 5 chr2 40459222 40459433 -212797150 + AluJo SINE Alu 1 210 -102 234 91 0 0 chr2 40459454 40459487 -212797096 + (A)n Simple_repeat Simple_repeat 1 33 0 21 0 0 0 chr2 40461001 40461022 -212795561 + AT_rich Low_complexity Low_complexity 1 21 0 1600 135 101 38 chr2 40461497 40461758 -212794825 - L1MB7 LINE L1 -8 6158 5846 1625 166 63 0 chr2 40461758 40462042 -212794541 - AluJb SINE Alu -10 302 1 1600 135 101 38 chr2 40462042 40462185 -212794398 - L1MB7 LINE L1 -320 5846 5713 1782 212 3 0 chr2 40462188 40462504 -212794079 - MLT1A1 LTR MaLR 0 365 49 183 42 0 0 chr2 40462504 40462528 -212794055 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1907 119 0 0 chr2 40462531 40462792 -212793791 - AluSx SINE Alu -31 281 21 1174 268 87 37 chr2 40462797 40462939 -212793644 + L2 LINE L2 2571 2704 -609 2111 140 3 0 chr2 40462939 40463247 -212793336 + AluSx SINE Alu 1 309 -3 1174 268 87 37 chr2 40463247 40463818 -212792765 + L2 LINE L2 2704 3312 -1 707 346 139 26 chr2 40464134 40464938 -212791645 - L2 LINE L2 -576 2738 1844 2156 122 3 0 chr2 40465779 40466083 -212790500 - AluSx SINE Alu -5 307 3 2320 79 0 0 chr2 40466098 40466388 -212790195 - AluY SINE Alu -21 290 1 2122 107 7 0 chr2 40466388 40466677 -212789906 - AluSp SINE Alu -22 291 1 2486 91 0 0 chr2 40466677 40466984 -212789599 - AluSc SINE Alu -2 307 1 634 277 61 17 chr2 40467135 40467448 -212789135 - L1ME4a LINE L1 -224 5897 5513 802 185 0 15 chr2 40467519 40467654 -212788929 - AluJo SINE Alu -178 134 2 947 219 0 12 chr2 40467657 40467826 -212788757 - FAM SINE Alu -8 167 1 1517 174 56 31 chr2 40467856 40468144 -212788439 - AluJb SINE Alu -17 295 1 254 241 154 56 chr2 40468147 40468182 -212788401 - L1ME4a LINE L1 -2339 5469 5439 2349 99 0 10 chr2 40468182 40468494 -212788089 - AluSg SINE Alu -1 309 1 254 241 154 56 chr2 40468494 40468620 -212787963 - L1ME4a LINE L1 -2369 5439 5292 2269 106 0 3 chr2 40468624 40468926 -212787657 - AluSx SINE Alu -11 301 1 22 0 0 0 chr2 40468932 40468954 -212787629 + AT_rich Low_complexity Low_complexity 1 22 0 937 136 0 8 chr2 40470659 40470791 -212785792 - FLAM_C SINE Alu -2 131 1 235 122 24 0 chr2 40470931 40470972 -212785611 - Alu SINE Alu -256 44 3 2234 123 0 0 chr2 40471240 40471540 -212785043 - AluSx SINE Alu -12 300 1 2337 89 3 0 chr2 40472031 40472324 -212784259 - AluSp SINE Alu -19 294 1 1604 184 17 10 chr2 40472363 40472662 -212783921 - AluSx SINE Alu -6 306 6 2316 98 0 3 chr2 40473700 40473997 -212782586 - AluSx SINE Alu -16 296 1 1295 122 0 6 chr2 40474526 40474707 -212781876 - AluJb SINE Alu -126 186 7 2027 140 0 3 chr2 40474787 40475097 -212781486 - AluSx SINE Alu 0 309 1 1642 170 24 20 chr2 40475177 40475471 -212781112 - AluJb SINE Alu -17 295 1 268 211 0 18 chr2 40475595 40475652 -212780931 - Charlie4 DNA MER1_type -23 1938 1883 1948 123 0 14 chr2 40475725 40476049 -212780534 + AluSg SINE Alu 1 310 0 1789 169 3 7 chr2 40476444 40476740 -212779843 - AluJo SINE Alu -17 295 1 354 47 0 0 chr2 40477638 40477681 -212778902 - tRNA-Gln-CAG tRNA tRNA -32 43 1 190 241 19 19 chr2 40477804 40477858 -212778725 + MIR SINE MIR 82 135 -73 280 79 0 0 chr2 40477892 40477930 -212778653 - HY1 scRNA scRNA -73 39 2 3002 220 42 24 chr2 40478163 40478678 -212777905 + L1M4 LINE L1 2656 3160 -2986 2257 105 3 0 chr2 40478678 40478973 -212777610 + AluSg SINE Alu 2 297 -13 3002 220 42 24 chr2 40478973 40479354 -212777229 + L1M4 LINE L1 3160 3561 -2585 2325 72 14 0 chr2 40479354 40479644 -212776939 - AluSp SINE Alu -19 294 1 3002 220 42 24 chr2 40479644 40479667 -212776916 + L1M4 LINE L1 3561 3582 -2564 2149 103 10 3 chr2 40479668 40479958 -212776625 - AluSx SINE Alu -20 292 1 23 54 0 0 chr2 40480612 40480649 -212775934 + AT_rich Low_complexity Low_complexity 1 37 0 4546 117 13 30 chr2 40480794 40480993 -212775590 + L1MB1 LINE L1 5482 5683 -485 2274 111 3 0 chr2 40480993 40481291 -212775292 + AluSx SINE Alu 1 299 -13 4546 117 13 30 chr2 40481291 40481790 -212774793 + L1MB1 LINE L1 5683 6168 0 2088 130 0 20 chr2 40481908 40482209 -212774374 - AluSq SINE Alu -18 295 1 2223 122 0 0 chr2 40482569 40482863 -212773720 - AluSx SINE Alu -18 294 1 1977 140 7 0 chr2 40484109 40484394 -212772189 + AluSq SINE Alu 1 287 -26 312 27 0 0 chr2 40485018 40485055 -212771528 + (TG)n Simple_repeat Simple_repeat 2 38 0 250 111 0 0 chr2 40485057 40485102 -212771481 - LTR66 LTR ERVL -171 439 395 * 268 109 0 0 chr2 40485065 40485111 -212771472 + LTR66 LTR ERVL 394 439 -171 270 81 0 0 chr2 40485113 40485150 -212771433 + (CA)n Simple_repeat Simple_repeat 2 38 0 2178 104 3 0 chr2 40485428 40485717 -212770866 - AluSp SINE Alu -23 290 1 968 154 0 0 chr2 40486156 40486305 -212770278 + AluJb SINE Alu 155 303 -9 2168 123 0 13 chr2 40486494 40486804 -212769779 - AluJb SINE Alu -6 306 1 2110 105 35 0 chr2 40486845 40487131 -212769452 - AluSg SINE Alu -14 296 1 873 199 0 0 chr2 40487148 40487279 -212769304 - FLAM_A SINE Alu -2 131 1 21 0 0 0 chr2 40487337 40487358 -212769225 + AT_rich Low_complexity Low_complexity 1 21 0 182 274 97 16 chr2 40487625 40487687 -212768896 - L2 LINE L2 -5 3308 3242 354 254 172 65 chr2 40487851 40487907 -212768676 - MIR SINE MIR -56 206 157 2283 112 0 3 chr2 40487907 40488210 -212768373 + AluSx SINE Alu 1 302 -10 354 254 172 65 chr2 40488210 40488322 -212768261 - MIR SINE MIR -105 157 20 1270 185 112 25 chr2 40488373 40488649 -212767934 + AluJo SINE Alu 1 300 -12 1008 93 0 56 chr2 40488872 40489033 -212767550 - AluSg/x SINE Alu -2 308 157 2258 76 42 7 chr2 40489134 40489422 -212767161 + AluSx SINE Alu 1 298 -14 1031 137 0 20 chr2 40489423 40489576 -212767007 + AluSg/x SINE Alu 126 275 -37 1751 128 24 14 chr2 40489720 40490010 -212766573 + AluSx SINE Alu 1 293 -19 238 220 0 51 chr2 40490256 40490315 -212766268 - AluS SINE Alu -246 57 2 525 321 96 23 chr2 40490357 40490496 -212766087 - MIR SINE MIR -13 249 87 2289 89 3 3 chr2 40490496 40490798 -212765785 + AluSq SINE Alu 1 302 -11 525 321 96 23 chr2 40490798 40490876 -212765707 - MIR SINE MIR -175 87 16 1872 152 24 7 chr2 40491265 40491562 -212765021 - AluJo SINE Alu -10 302 1 1039 58 0 0 chr2 40492090 40492237 -212764346 - AluSg/x SINE Alu 0 308 162 1923 199 50 24 chr2 40492337 40492800 -212763783 + L1MC4 LINE L1 7568 8042 0 250 289 29 77 chr2 40493795 40493899 -212762684 + MIR3 SINE MIR 10 108 -100 278 338 81 0 chr2 40494218 40494354 -212762229 - L2 LINE L2 -1 3312 3166 874 20 0 0 chr2 40494430 40494530 -212762053 + AluY SINE Alu 1 100 -211 266 312 44 21 chr2 40494866 40494972 -212761611 - MER5A DNA MER1_type -4 185 59 1984 111 41 0 chr2 40494972 40495271 -212761312 - AluSx SINE Alu 0 310 1 266 312 44 21 chr2 40495271 40495299 -212761284 - MER5A DNA MER1_type -130 59 33 2498 213 25 32 chr2 40495372 40496764 -212759819 + L1M4b LINE L1 673 2177 -4782 2420 65 0 7 chr2 40496767 40497061 -212759522 + AluY SINE Alu 1 292 -19 1059 64 64 0 chr2 40498719 40498859 -212757724 - AluSg/x SINE Alu -19 291 143 21 0 0 0 chr2 40498863 40498884 -212757699 + AT_rich Low_complexity Low_complexity 1 21 0 1053 194 29 0 chr2 40499135 40499305 -212757278 - FAM SINE Alu 0 175 1 329 337 83 24 chr2 40499327 40499532 -212757051 + L2 LINE L2 2739 2955 -359 992 158 0 12 chr2 40499571 40499765 -212756818 - AluJb SINE Alu 0 311 120 825 175 0 0 chr2 40499806 40499949 -212756634 - FLAM_C SINE Alu 0 143 1 484 271 96 21 chr2 40500034 40500222 -212756361 + L2 LINE L2 3109 3310 -3 2492 76 3 0 chr2 40501083 40501387 -212755196 - AluSp SINE Alu -8 305 1 23 54 0 0 chr2 40501404 40501441 -212755142 + AT_rich Low_complexity Low_complexity 1 37 0 1867 107 0 50 chr2 40502340 40502620 -212753963 + AluSx SINE Alu 1 266 -46 802 264 67 31 chr2 40503161 40503517 -212753066 + L1ME4a LINE L1 5616 5984 -137 2288 119 0 0 chr2 40505764 40506076 -212750507 + AluSx SINE Alu 1 312 0 625 261 74 39 chr2 40506334 40506537 -212750046 - MIR SINE MIR -3 259 50 2365 93 3 0 chr2 40507499 40507799 -212748784 + AluSg SINE Alu 1 301 -9 207 0 0 0 chr2 40507942 40507965 -212748618 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 1723 175 16 3 chr2 40508689 40508992 -212747591 - AluJo SINE Alu -1 311 5 473 128 26 0 chr2 40509282 40509360 -212747223 + MER116 DNA Mariner 1 80 0 2146 94 13 26 chr2 40510469 40510777 -212745806 - AluSx SINE Alu -8 304 1 23 0 0 0 chr2 40510781 40510804 -212745779 + AT_rich Low_complexity Low_complexity 1 23 0 1454 223 103 65 chr2 40511399 40511721 -212744862 - MLT1F LTR MaLR -29 513 164 2044 128 30 0 chr2 40511721 40512025 -212744558 - AluSq SINE Alu 0 313 1 1454 223 103 65 chr2 40512025 40512196 -212744387 - MLT1F LTR MaLR -378 164 1 359 277 85 0 chr2 40512514 40512644 -212743939 + L2 LINE L2 1964 2104 -1210 698 103 33 48 chr2 40512771 40513022 -212743561 + CT-rich Low_complexity Low_complexity 1 247 0 796 282 136 40 chr2 40513044 40513534 -212743049 - L2 LINE L2 -43 3270 2713 1219 156 0 82 chr2 40513535 40513766 -212742817 - AluJo SINE Alu -16 296 85 440 284 16 0 chr2 40513839 40513966 -212742617 - MIR SINE MIR -10 252 124 195 245 0 0 chr2 40514048 40514097 -212742486 + L2 LINE L2 3221 3269 -3 202 143 24 0 chr2 40514573 40514615 -212741968 + A-rich Low_complexity Low_complexity 3 45 0 2313 102 0 0 chr2 40515044 40515339 -212741244 + AluSq SINE Alu 1 295 -18 263 211 375 0 chr2 40515466 40515594 -212740989 + MIR SINE MIR 86 261 -1 222 275 144 38 chr2 40515981 40516141 -212740442 - MIR3 SINE MIR -16 192 16 21 0 0 0 chr2 40516834 40516855 -212739728 + GC_rich Low_complexity Low_complexity 1 21 0 1316 155 11 114 chr2 40517573 40517667 -212738916 - MER8 DNA MER2_type -1 238 136 2666 46 0 0 chr2 40517667 40517974 -212738609 + AluY SINE Alu 1 307 -4 1316 155 11 114 chr2 40517974 40517990 -212738593 - MER8 DNA MER2_type -103 136 120 1945 154 7 3 chr2 40517990 40518295 -212738288 + AluJo SINE Alu 6 311 -1 1316 155 11 114 chr2 40518295 40518447 -212738136 - MER8 DNA MER2_type -119 120 2 722 224 251 4 chr2 40518451 40518714 -212737869 + L2 LINE L2 2986 3313 0 465 273 68 30 chr2 40518762 40518894 -212737689 - L2 LINE L2 -2 3270 3134 2956 223 57 58 chr2 40518963 40519084 -212737499 - L1M4c LINE L1 -3278 3104 2984 2340 88 0 10 chr2 40519084 40519381 -212737202 + AluSx SINE Alu 1 294 -18 2956 223 57 58 chr2 40519381 40520188 -212736395 - L1M4c LINE L1 -3398 2984 2175 2066 168 48 41 chr2 40520188 40520366 -212736217 + MSTD LTR MaLR 1 176 -220 2093 93 27 27 chr2 40520366 40520666 -212735917 + AluY SINE Alu 1 300 -11 2066 168 48 41 chr2 40520666 40520880 -212735703 + MSTD LTR MaLR 176 396 0 2956 223 57 58 chr2 40520880 40521459 -212735124 - L1M4c LINE L1 -4207 2175 1597 2199 79 0 7 chr2 40521463 40521742 -212734841 - AluY SINE Alu 0 311 35 253 274 95 24 chr2 40522147 40522231 -212734352 - MIR3 SINE MIR -42 166 77 24 32 0 0 chr2 40522516 40522547 -212734036 + AT_rich Low_complexity Low_complexity 1 31 0 273 192 0 0 chr2 40522597 40522649 -212733934 - HAL1 LINE L1 -120 2387 2336 1724 155 7 17 chr2 40522736 40523033 -212733550 + AluJo SINE Alu 1 294 -18 1714 204 90 43 chr2 40523060 40523464 -212733119 - L1ME3 LINE L1 -3 6159 5776 2062 137 0 3 chr2 40523464 40523756 -212732827 - AluSx SINE Alu -21 291 1 1714 204 90 43 chr2 40523756 40524142 -212732441 - L1ME3 LINE L1 -386 5776 5323 980 178 0 18 chr2 40524144 40524307 -212732276 - AluJb SINE Alu -23 289 130 939 247 59 7 chr2 40524321 40524608 -212731975 - L1ME3 LINE L1 -1029 5117 4816 454 180 34 0 chr2 40524634 40524723 -212731860 - L1ME3 LINE L1 -1587 4559 4468 688 203 0 8 chr2 40524787 40524910 -212731673 - FLAM_A SINE Alu -11 122 1 458 184 56 101 chr2 40524958 40525137 -212731446 - HAL1 LINE L1 -648 1859 1689 2256 180 78 118 chr2 40525142 40525865 -212730718 - LTR8A LTR ERV1 0 727 34 2331 259 89 89 chr2 40525879 40526023 -212730560 - HAL1 LINE L1 -888 1619 1476 2242 109 3 0 chr2 40526023 40526327 -212730256 - AluSg SINE Alu -5 305 1 2331 259 89 89 chr2 40526327 40526643 -212729940 - HAL1 LINE L1 -1031 1476 1161 2050 114 23 10 chr2 40526643 40526942 -212729641 - AluSc SINE Alu -6 303 1 2331 259 89 89 chr2 40526942 40527416 -212729167 - HAL1 LINE L1 -1346 1161 688 2277 109 0 0 chr2 40527416 40527710 -212728873 - AluSx SINE Alu -18 294 1 2331 259 89 89 chr2 40527710 40528345 -212728238 - HAL1 LINE L1 -1818 689 48 1443 199 92 52 chr2 40528655 40529036 -212727547 - MSTD LTR MaLR 0 396 1 225 0 0 0 chr2 40529359 40529384 -212727199 + (TG)n Simple_repeat Simple_repeat 1 25 0 312 314 145 8 chr2 40530330 40530454 -212726129 - MIR SINE MIR -115 147 7 2199 141 0 0 chr2 40531103 40531408 -212725175 - AluSx SINE Alu -7 305 1 965 151 13 113 chr2 40531868 40532106 -212724477 - AluJo SINE Alu -13 299 86 449 161 11 0 chr2 40533004 40533091 -212723492 + GA-rich Low_complexity Low_complexity 4 91 0 2913 120 11 25 chr2 40534147 40534581 -212722002 - MSTA LTR MaLR 0 428 1 1959 101 31 0 chr2 40534917 40535209 -212721374 - AluSx SINE Alu 0 317 18 389 237 62 98 chr2 40535679 40535873 -212720710 - MIR3 SINE MIR 0 208 22 440 253 0 6 chr2 40535939 40535967 -212720616 + (TA)n Simple_repeat Simple_repeat 1 28 -141 846 172 0 30 chr2 40535967 40536101 -212720482 + FLAM_C SINE Alu 1 130 -3 440 253 0 6 chr2 40536101 40536242 -212720341 + (TA)n Simple_repeat Simple_repeat 28 169 0 848 224 38 61 chr2 40536377 40536641 -212719942 - MER102b DNA MER1_type 0 341 84 2129 100 3 7 chr2 40537186 40537476 -212719107 - AluY SINE Alu -17 294 6 2373 100 0 0 chr2 40539116 40539416 -212717167 - AluSx SINE Alu -12 300 1 1077 126 0 60 chr2 40539964 40540146 -212716437 - AluJb SINE Alu -5 307 137 198 0 0 0 chr2 40540146 40540168 -212716415 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2130 73 26 0 chr2 40540171 40540443 -212716140 - AluY SINE Alu -24 287 9 506 280 28 7 chr2 40540512 40540655 -212715928 - MIR SINE MIR -70 192 47 740 293 29 5 chr2 40540700 40540908 -212715675 + MIR SINE MIR 44 256 -6 602 231 133 71 chr2 40541858 40542113 -212714470 - L2 LINE L2 -1 3312 3042 1310 86 145 0 chr2 40543191 40543377 -212713206 - AluSq SINE Alu -15 298 86 979 70 0 0 chr2 40543377 40543492 -212713091 - AluSq/x SINE Alu -163 150 36 365 168 131 9 chr2 40543795 40543902 -212712681 - L1MC5 LINE L1 -35 7926 7807 27 62 0 0 chr2 40545003 40545051 -212711532 + GC_rich Low_complexity Low_complexity 1 48 0 558 318 128 39 chr2 40546073 40546378 -212710205 - L2 LINE L2 0 3272 2941 2232 88 0 32 chr2 40547201 40547509 -212709074 + AluY SINE Alu 1 298 -13 222 346 0 0 chr2 40547570 40547648 -212708935 + (TATATG)n Simple_repeat Simple_repeat 6 83 0 555 189 170 26 chr2 40547868 40548021 -212708562 + MIR SINE MIR 12 186 -76 397 125 159 23 chr2 40548150 40548238 -212708345 + MER5A DNA MER1_type 7 106 -83 3589 86 4 2 chr2 40548303 40548767 -212707816 - Charlie3 DNA MER1_type -4 2706 2242 * 3728 92 24 10 chr2 40548761 40549253 -212707330 - Charlie3 DNA MER1_type -2210 500 2 476 272 48 0 chr2 40549292 40549417 -212707166 - MER5A DNA MER1_type -58 131 1 1998 107 3 14 chr2 40552056 40552347 -212704236 - AluSx SINE Alu -24 288 1 252 0 0 0 chr2 40552404 40552432 -212704151 + (T)n Simple_repeat Simple_repeat 1 28 0 414 286 265 0 chr2 40552588 40552822 -212703761 + L3 LINE CR1 1269 1564 -13 185 284 137 42 chr2 40553520 40553615 -212702968 - L2 LINE L2 -43 3229 3126 213 309 144 10 chr2 40555062 40555159 -212701424 - L2 LINE L2 -14 3258 3149 318 173 0 0 chr2 40555187 40555239 -212701344 + L2 LINE L2 3259 3310 -3 276 53 0 0 chr2 40558379 40558417 -212698166 + (TA)n Simple_repeat Simple_repeat 2 39 0 325 248 80 29 chr2 40560562 40560699 -212695884 + L2 LINE L2 3159 3302 -11 1375 164 31 0 chr2 40560921 40561146 -212695437 - AluJo SINE Alu -77 235 4 399 204 0 61 chr2 40561648 40561746 -212694837 + MER5A DNA MER1_type 42 133 -56 862 97 17 4 chr2 40561747 40561881 -212694702 - L1PA15 LINE L1 -9 6159 6020 2607 207 120 127 chr2 40562968 40563420 -212693163 + L2 LINE L2 1610 2063 -1250 949 124 12 43 chr2 40563420 40563581 -212693002 - FAM SINE Alu 0 49 1 2607 207 120 127 chr2 40563581 40564681 -212691902 + L2 LINE L2 2063 3313 0 298 297 127 0 chr2 40564860 40564978 -212691605 - MIR SINE MIR -5 257 125 326 306 81 0 chr2 40565440 40565551 -212691032 + MIR3 SINE MIR 81 200 -8 1244 181 0 5 chr2 40570940 40571150 -212685433 - AluJo SINE Alu -19 293 85 541 231 135 6 chr2 40575473 40575629 -212680954 - MER5B DNA MER1_type -1 177 2 655 188 14 62 chr2 40577428 40577572 -212679011 + FLAM_C SINE Alu 6 142 -1 1948 156 0 3 chr2 40577634 40577929 -212678654 - AluJo SINE Alu -18 294 1 267 296 82 10 chr2 40578124 40578222 -212678361 - MIR SINE MIR -142 120 16 21 0 0 0 chr2 40578433 40578454 -212678129 + AT_rich Low_complexity Low_complexity 1 21 0 1622 147 83 7 chr2 40578489 40578789 -212677794 + MER33 DNA MER1_type 2 324 0 1194 171 118 0 chr2 40579003 40579214 -212677369 - MER46A DNA MER2_type 0 236 1 2022 108 7 24 chr2 40580560 40580857 -212675726 - AluSx SINE Alu -19 293 2 24 32 0 0 chr2 40581524 40581555 -212675028 + AT_rich Low_complexity Low_complexity 1 31 0 296 98 20 20 chr2 40582088 40582139 -212674444 + L1MDa LINE L1 1800 1850 -4690 27 0 0 0 chr2 40582699 40582726 -212673857 + AT_rich Low_complexity Low_complexity 1 27 0 2240 87 0 4 chr2 40582736 40583012 -212673571 - AluSx SINE Alu -30 282 8 582 210 114 30 chr2 40583023 40583190 -212673393 + MIR SINE MIR 82 262 0 181 317 23 153 chr2 40583289 40583807 -212672776 - L2 LINE L2 -1 3271 2821 364 305 115 32 chr2 40584350 40584629 -212671954 - L2 LINE L2 -596 2718 2417 273 177 65 16 chr2 40584729 40584791 -212671792 - Charlie7 DNA MER1_type 0 2612 2548 323 196 78 10 chr2 40584868 40584970 -212671613 - Charlie7 DNA MER1_type -2468 144 36 272 342 29 96 chr2 40585030 40585302 -212671281 + L2 LINE L2 3018 3271 -1 1874 158 0 14 chr2 40585540 40585831 -212670752 - AluSx SINE Alu -25 287 1 2230 82 10 30 chr2 40586503 40586806 -212669777 + AluSq SINE Alu 1 297 -16 294 300 91 0 chr2 40586994 40587104 -212669479 + L2 LINE L2 3153 3272 0 1843 167 0 7 chr2 40587251 40587550 -212669033 + AluJb SINE Alu 1 297 -15 1017 179 27 49 chr2 40588295 40588519 -212668064 - MER20 DNA MER1_type 0 219 1 2246 68 44 17 chr2 40588602 40588897 -212667686 + AluY SINE Alu 1 303 -8 231 271 103 65 chr2 40589227 40589489 -212667094 + L1ME4a LINE L1 5354 5625 -496 484 188 0 12 chr2 40589494 40589574 -212667009 - MER44D DNA MER2_type -1 704 626 216 97 0 0 chr2 40589574 40589605 -212666978 + (CATA)n Simple_repeat Simple_repeat 2 32 0 646 171 137 0 chr2 40589648 40589765 -212666818 - MER44D DNA MER2_type -206 403 1 377 272 99 9 chr2 40589766 40589998 -212666585 + L1ME4a LINE L1 5628 5880 -241 21 71 0 0 chr2 40591410 40591452 -212665131 + AT_rich Low_complexity Low_complexity 1 42 0 365 43 0 0 chr2 40592148 40592195 -212664388 - MADE1 DNA Mariner -33 47 1 2426 265 141 35 chr2 40592219 40592277 -212664306 + L1M4b LINE L1 11 61 -6798 288 111 0 0 chr2 40592277 40592322 -212664261 + (CA)n Simple_repeat Simple_repeat 2 46 0 2426 265 141 35 chr2 40592322 40593238 -212663345 + L1M4b LINE L1 61 1088 -5771 1508 199 8 63 chr2 40593284 40593752 -212662831 + L1M4b LINE L1 1290 1733 -5122 631 233 75 75 chr2 40593760 40594095 -212662488 + L1M4b LINE L1 2366 2700 -4438 368 269 47 103 chr2 40594180 40594500 -212662083 + L1M4b LINE L1 2617 2918 -4041 2280 122 0 0 chr2 40594502 40594813 -212661770 + AluSx SINE Alu 1 311 -1 992 188 18 0 chr2 40594820 40594990 -212661593 + AluSg/x SINE Alu 128 300 -10 2271 106 0 16 chr2 40595353 40595665 -212660918 - AluSq SINE Alu -6 307 1 689 240 73 34 chr2 40596166 40596370 -212660213 - MIR SINE MIR -3 259 48 258 298 64 11 chr2 40596449 40596543 -212660040 - MIR SINE MIR -28 234 136 43 35 0 0 chr2 40596826 40596883 -212659700 + AT_rich Low_complexity Low_complexity 1 57 0 519 339 32 21 chr2 40597391 40597580 -212659003 - MIR3 SINE MIR 0 208 18 28 0 0 0 chr2 40598625 40598653 -212657930 + AT_rich Low_complexity Low_complexity 1 28 0 26 50 0 0 chr2 40599185 40599225 -212657358 + AT_rich Low_complexity Low_complexity 1 40 0 216 0 0 0 chr2 40600271 40600295 -212656288 + (T)n Simple_repeat Simple_repeat 1 24 0 315 304 27 27 chr2 40601572 40601684 -212654899 - MIR SINE MIR -76 132 21 24 0 0 0 chr2 40604201 40604225 -212652358 + AT_rich Low_complexity Low_complexity 1 24 0 220 386 44 0 chr2 40604551 40604665 -212651918 + MIR3 SINE MIR 37 155 -53 21 57 0 0 chr2 40605425 40605460 -212651123 + AT_rich Low_complexity Low_complexity 1 35 0 198 0 0 0 chr2 40605994 40606016 -212650567 + (A)n Simple_repeat Simple_repeat 1 22 0 25 0 0 0 chr2 40606652 40606677 -212649906 + AT_rich Low_complexity Low_complexity 1 25 0 370 241 79 65 chr2 40609077 40609218 -212647365 + MIR SINE MIR 38 178 -62 502 191 0 0 chr2 40609591 40609675 -212646908 + AluJ/FLAM SINE Alu 1 84 -228 22 35 0 0 chr2 40609682 40609711 -212646872 + AT_rich Low_complexity Low_complexity 1 29 0 1959 144 0 32 chr2 40609815 40610128 -212646455 - AluSx SINE Alu -9 303 1 2454 88 0 0 chr2 40610543 40610851 -212645732 + AluSg SINE Alu 1 308 -2 1093 92 61 0 chr2 40611232 40611395 -212645188 + MER30 DNA MER1_type 1 173 -57 1950 108 76 7 chr2 40612299 40612576 -212644007 - AluSg SINE Alu -14 296 1 21 0 0 0 chr2 40613257 40613278 -212643305 + AT_rich Low_complexity Low_complexity 1 21 0 1889 163 10 3 chr2 40613812 40614119 -212642464 + AluJb SINE Alu 1 309 -3 1657 180 20 16 chr2 40614355 40614661 -212641922 + AluJo SINE Alu 3 309 -3 204 97 0 0 chr2 40614698 40614729 -212641854 + (A)n Simple_repeat Simple_repeat 1 31 0 1722 180 3 20 chr2 40614750 40615044 -212641539 + AluJo SINE Alu 1 289 -23 1847 199 16 59 chr2 40615156 40615644 -212640939 + MLT1C LTR MaLR 1 467 0 1891 134 22 0 chr2 40615916 40616219 -212640364 + AluSx SINE Alu 1 309 0 1648 154 60 6 chr2 40616474 40616806 -212639777 - L1MA8 LINE L1 0 6291 5942 296 314 132 0 chr2 40616970 40617091 -212639492 - L2 LINE L2 0 3272 3136 1822 115 4 19 chr2 40617149 40617410 -212639173 + AluSx SINE Alu 3 259 -53 1076 133 0 0 chr2 40617530 40617688 -212638895 - AluSp SINE Alu -4 309 152 1817 157 7 10 chr2 40618005 40618304 -212638279 - AluJo SINE Alu -13 299 2 243 167 0 0 chr2 40619428 40619494 -212637089 + A-rich Low_complexity Low_complexity 1 66 0 1655 146 0 79 chr2 40620822 40621041 -212635542 - AluJb SINE Alu -21 291 103 2458 53 0 7 chr2 40621041 40621343 -212635240 - AluY SINE Alu -11 300 1 1655 146 0 79 chr2 40621343 40621439 -212635144 - AluJb SINE Alu -209 103 1 198 303 49 74 chr2 40621457 40621579 -212635004 + MIR3 SINE MIR 8 126 -82 244 223 91 22 chr2 40621915 40622021 -212634562 - L1MC/D LINE L1 -360 5804 5691 907 151 102 38 chr2 40622031 40622217 -212634366 + Tigger1 DNA MER2_type 1 198 -2220 7846 116 45 14 chr2 40622219 40622922 -212633661 + Tigger1 DNA MER2_type 1125 1884 -534 2445 75 0 0 chr2 40622922 40623217 -212633366 + AluSc SINE Alu 1 295 -14 7846 116 45 14 chr2 40623217 40623769 -212632814 + Tigger1 DNA MER2_type 1884 2418 0 585 250 62 40 chr2 40623834 40624110 -212632473 - L1MC/D LINE L1 -588 5574 5293 1693 177 16 31 chr2 40624115 40624471 -212632112 - L1MB8 LINE L1 -1 6177 5826 2466 64 0 19 chr2 40624471 40624785 -212631798 - AluY SINE Alu -3 308 1 1693 177 16 31 chr2 40624785 40624813 -212631770 - L1MB8 LINE L1 -352 5826 5799 3590 149 43 34 chr2 40624813 40625538 -212631045 - L1MB4 LINE L1 0 6180 5428 1153 186 10 0 chr2 40625540 40625739 -212630844 - AluJo SINE Alu -25 287 87 1659 154 87 4 chr2 40625739 40626188 -212630395 - L1MB4 LINE L1 -743 5403 4941 813 277 140 67 chr2 40626204 40626860 -212629723 - L1MC/D LINE L1 -960 5186 4579 2172 109 0 3 chr2 40626860 40627171 -212629412 - AluSg SINE Alu 0 310 1 813 277 140 67 chr2 40627171 40627702 -212628881 - L1MC/D LINE L1 -1567 4579 3912 1206 177 72 35 chr2 40628005 40628362 -212628221 - MSTC LTR MaLR -12 416 1 1500 160 21 0 chr2 40628543 40628780 -212627803 + AluSx SINE Alu 1 242 -70 318 347 72 0 chr2 40628821 40628988 -212627595 - L1MC/D LINE L1 -2968 3178 3000 268 204 0 19 chr2 40628989 40629043 -212627540 + MSTC LTR MaLR 23 75 -353 1202 180 0 84 chr2 40629046 40629307 -212627276 - MER8 DNA MER2_type 0 239 1 198 167 0 0 chr2 40629310 40629346 -212627237 + (CA)n Simple_repeat Simple_repeat 2 37 0 1111 171 90 66 chr2 40629349 40629683 -212626900 + MER2 DNA MER2_type 3 344 0 366 23 0 0 chr2 40629696 40629739 -212626844 + (GA)n Simple_repeat Simple_repeat 1 43 0 270 0 0 0 chr2 40629738 40629768 -212626815 + (TG)n Simple_repeat Simple_repeat 2 31 0 * 455 291 68 29 chr2 40629778 40630163 -212626420 - L1MC/D LINE L1 -3525 2621 2212 2146 115 3 16 chr2 40630163 40630476 -212626107 - AluSg SINE Alu -1 309 1 455 291 68 29 chr2 40630476 40630572 -212626011 - L1MC/D LINE L1 -3934 2212 2121 26 0 0 0 chr2 40630923 40630949 -212625634 + AT_rich Low_complexity Low_complexity 1 26 0 2242 90 10 0 chr2 40630960 40631260 -212625323 - AluSx SINE Alu -4 308 6 1354 207 242 22 chr2 40631470 40632064 -212624519 - L1ME3 LINE L1 -47 6115 5315 1867 155 16 10 chr2 40632128 40632431 -212624152 - AluSx SINE Alu -7 305 1 874 268 15 7 chr2 40632431 40632696 -212623887 - L1ME3 LINE L1 -861 5285 5016 576 289 87 47 chr2 40632693 40632862 -212623721 - L1MEd LINE L1 -880 1610 1449 * 2088 139 0 3 chr2 40632862 40633165 -212623418 - AluSx SINE Alu -10 302 1 576 289 87 47 chr2 40633165 40633399 -212623184 - L1MEd LINE L1 -1041 1449 1226 2191 92 21 0 chr2 40633399 40633681 -212622902 - AluSx SINE Alu -24 288 1 576 289 87 47 chr2 40633681 40633911 -212622672 - L1MEd LINE L1 -1264 1226 859 636 266 33 55 chr2 40634874 40634957 -212621626 - MIR SINE MIR -16 246 163 1170 134 129 0 chr2 40634957 40635166 -212621417 - MER46A DNA MER2_type 0 236 1 636 266 33 55 chr2 40635166 40635324 -212621259 - MIR SINE MIR -99 163 7 1515 166 67 24 chr2 40635955 40636328 -212620255 - Charlie1 DNA MER1_type 0 2761 2373 1007 120 43 128 chr2 40636342 40636600 -212619983 - L1MB7 LINE L1 -16 6168 5933 564 167 0 28 chr2 40636600 40636708 -212619875 - Charlie1 DNA MER1_type -432 2329 2225 2951 198 55 47 chr2 40636779 40637334 -212619249 - L1ME1 LINE L1 -9 6157 5593 2260 98 0 0 chr2 40637334 40637629 -212618954 + AluSx SINE Alu 1 295 -17 2951 198 55 47 chr2 40637629 40637860 -212618723 - L1ME1 LINE L1 -573 5593 5365 505 214 0 17 chr2 40637909 40638026 -212618557 - L1MB8 LINE L1 0 6178 6064 281 338 59 37 chr2 40638345 40638391 -212618192 + L2 LINE L2 3128 3172 -100 2628 37 0 0 chr2 40638391 40638689 -212617894 - AluY SINE Alu -12 299 2 281 338 59 37 chr2 40638689 40638778 -212617805 + L2 LINE L2 3172 3266 -6 337 328 90 21 chr2 40640240 40640429 -212616154 + MIR SINE MIR 12 213 -49 2172 99 44 7 chr2 40640611 40640904 -212615679 + AluSg SINE Alu 1 304 -6 356 273 0 30 chr2 40642350 40642449 -212614134 + MIR SINE MIR 59 154 -108 643 218 68 68 chr2 40644719 40644881 -212611702 + MER112 DNA MER1_type 3 167 -93 2105 130 7 0 chr2 40644881 40645188 -212611395 - AluSx SINE Alu -3 309 1 643 218 68 68 chr2 40645188 40645277 -212611306 + MER112 DNA MER1_type 166 254 -6 189 0 0 0 chr2 40645713 40645734 -212610849 + (A)n Simple_repeat Simple_repeat 1 21 0 22 35 0 0 chr2 40645791 40645820 -212610763 + AT_rich Low_complexity Low_complexity 1 29 0 1762 174 3 19 chr2 40645841 40646151 -212610432 - AluJo SINE Alu -7 305 1 2274 118 0 6 chr2 40646599 40646913 -212609670 + AluSx SINE Alu 1 312 0 21 0 0 0 chr2 40647316 40647337 -212609246 + AT_rich Low_complexity Low_complexity 1 21 0 442 154 15 0 chr2 40647462 40647527 -212609056 - MER2 DNA MER2_type 0 345 280 27 29 0 0 chr2 40647527 40647561 -212609022 + AT_rich Low_complexity Low_complexity 1 34 0 998 156 0 13 chr2 40647591 40647745 -212608838 - FRAM SINE Alu -19 157 6 1065 158 0 16 chr2 40647750 40647933 -212608650 - MER2 DNA MER2_type -164 181 2 1674 164 29 32 chr2 40648289 40648600 -212607983 - AluJb SINE Alu -2 310 1 691 167 54 18 chr2 40648615 40648783 -212607800 - L1MA8 LINE L1 -7 6284 6111 508 117 26 0 chr2 40648791 40648868 -212607715 - MLT1A1 LTR MaLR -286 79 1 514 172 66 73 chr2 40648982 40649133 -212607450 - L1MA8 LINE L1 -173 6118 5969 2062 125 3 32 chr2 40649206 40649519 -212607064 - AluSx SINE Alu -6 306 3 478 143 26 0 chr2 40649724 40649801 -212606782 + MLT1A1 LTR MaLR 1 79 -286 346 250 113 0 chr2 40650148 40650228 -212606355 + MIR SINE MIR 37 125 -137 581 231 54 8 chr2 40650231 40650361 -212606222 - L2 LINE L2 -2 3311 3176 320 188 72 0 chr2 40651455 40651524 -212605059 - MER46A DNA MER2_type -90 146 73 1444 168 0 13 chr2 40651539 40651777 -212604806 - AluJb SINE Alu -77 235 1 939 161 78 22 chr2 40651777 40651957 -212604626 + MER46A DNA MER2_type 47 236 0 2200 106 0 0 chr2 40652300 40652593 -212603990 + AluSx SINE Alu 1 293 -19 195 284 25 37 chr2 40652950 40653031 -212603552 + L2 LINE L2 3174 3253 -19 21 0 0 0 chr2 40653152 40653173 -212603410 + AT_rich Low_complexity Low_complexity 1 21 0 1227 194 0 103 chr2 40653529 40653858 -212602725 + AluJo SINE Alu 3 297 -15 200 244 0 0 chr2 40653889 40653930 -212602653 + (TA)n Simple_repeat Simple_repeat 2 42 0 2267 101 0 0 chr2 40654015 40654311 -212602272 - AluSx SINE Alu -16 296 1 214 196 130 0 chr2 40654336 40654382 -212602201 - MIR SINE MIR -121 141 90 180 369 68 19 chr2 40654450 40654553 -212602030 - MIR3 SINE MIR -99 109 2 263 307 160 31 chr2 40654797 40655116 -212601467 + L2 LINE L2 1986 2345 -969 266 319 14 0 chr2 40655264 40655333 -212601250 - L3 LINE CR1 -1 1576 1507 2154 111 0 17 chr2 40655333 40655631 -212600952 - AluSx SINE Alu -19 293 1 310 333 72 0 chr2 40656499 40656610 -212599973 - L2 LINE L2 -2 3311 3193 292 40 140 0 chr2 40657761 40657811 -212598772 - MADE1 DNA Mariner -23 57 1 2201 121 0 0 chr2 40658531 40658837 -212597746 + AluSx SINE Alu 1 306 -6 818 120 96 0 chr2 40658838 40658963 -212597620 + AluSg/x SINE Alu 82 218 -94 2315 105 3 0 chr2 40659049 40659355 -212597228 + AluSp SINE Alu 1 307 -6 194 325 103 8 chr2 40659744 40659861 -212596722 - L2 LINE L2 -876 2438 2311 571 246 0 0 chr2 40659991 40660105 -212596478 + FLAM_A SINE Alu 6 119 -23 394 259 108 25 chr2 40660124 40660440 -212596143 + L1ME3A LINE L1 3174 3515 -2631 1421 241 97 52 chr2 40660545 40660591 -212595992 + L1ME3A LINE L1 3713 3755 -2391 1566 187 42 3 chr2 40660591 40660875 -212595708 + AluJb SINE Alu 1 295 -17 1421 241 97 52 chr2 40660875 40661524 -212595059 + L1ME3A LINE L1 3755 4447 -1699 1832 138 81 0 chr2 40661524 40661807 -212594776 + AluSx SINE Alu 1 306 -6 1421 241 97 52 chr2 40661807 40661865 -212594718 + L1ME3A LINE L1 4447 4501 -1645 685 276 113 48 chr2 40661883 40662913 -212593670 + L1ME3A LINE L1 4540 5647 -515 1670 170 56 25 chr2 40662919 40663242 -212593341 + MER1B DNA MER1_type 2 334 -5 2343 97 0 7 chr2 40663243 40663551 -212593032 + AluSc SINE Alu 1 306 -3 375 281 22 5 chr2 40663619 40663804 -212592779 + L1ME3A LINE L1 5770 5957 -213 2523 79 0 0 chr2 40663951 40664256 -212592327 - AluSg SINE Alu -5 305 1 485 121 0 60 chr2 40664321 40664404 -212592179 - MER1A DNA MER1_type 0 539 462 3613 107 25 4 chr2 40664418 40664934 -212591649 - MER1A DNA MER1_type 0 527 1 1372 153 120 29 chr2 40665367 40665642 -212590941 + AluJo SINE Alu 1 300 -12 1926 139 7 3 chr2 40665701 40666004 -212590579 + AluSx SINE Alu 1 304 -8 2051 119 31 0 chr2 40666007 40666293 -212590290 + AluSx SINE Alu 2 296 -16 26 50 0 0 chr2 40666302 40666342 -212590241 + AT_rich Low_complexity Low_complexity 1 40 0 1716 99 48 4 chr2 40666387 40666659 -212589924 - L1MA2 LINE L1 -7 6297 6014 267 257 95 0 chr2 40666769 40666843 -212589740 - L2 LINE L2 -37 3276 3196 631 133 29 9 chr2 40667053 40667158 -212589425 + U6 snRNA snRNA 1 107 0 2269 174 45 13 chr2 40667230 40667677 -212588906 - MER65C LTR ERV1 0 461 1 187 355 33 16 chr2 40667920 40668041 -212588542 - L2 LINE L2 -1385 1929 1807 592 265 168 4 chr2 40668068 40668312 -212588271 + L1ME LINE L1 5508 5801 -320 2407 111 40 8 chr2 40668312 40668690 -212587893 + MLT1B LTR MaLR 1 390 0 592 265 168 4 chr2 40668690 40668713 -212587870 + L1ME LINE L1 5801 5819 -302 36 0 0 0 chr2 40669072 40669108 -212587475 + AT_rich Low_complexity Low_complexity 1 36 0 1769 166 3 7 chr2 40669502 40669804 -212586779 - AluJo SINE Alu -3 309 9 230 263 62 25 chr2 40670290 40670370 -212586213 - L2 LINE L2 -69 3203 3121 271 356 29 0 chr2 40670413 40670517 -212586066 + MIR SINE MIR 9 115 -147 334 269 53 76 chr2 40670792 40670963 -212585620 - L2 LINE L2 -870 2444 2278 2248 108 0 3 chr2 40671281 40671576 -212585007 - AluSx SINE Alu -16 296 3 282 308 99 16 chr2 40672005 40672136 -212584447 + MIR SINE MIR 66 218 -44 1615 159 33 33 chr2 40672136 40672437 -212584146 - AluJb SINE Alu -11 301 1 282 308 99 16 chr2 40672437 40672487 -212584096 + MIR SINE MIR 218 262 0 348 250 43 86 chr2 40672652 40672768 -212583815 - MER5A DNA MER1_type 0 189 79 3773 168 57 22 chr2 40672783 40673539 -212583044 - L1MB3 LINE L1 0 6183 5402 1939 139 9 22 chr2 40673706 40674023 -212582560 + AluSq SINE Alu 1 313 0 649 165 0 8 chr2 40674023 40674144 -212582439 + L1MD3 LINE L1 6914 7033 -962 2036 134 0 42 chr2 40674308 40674621 -212581962 + AluSx SINE Alu 1 300 -12 2138 113 0 0 chr2 40674877 40675191 -212581392 + AluSx SINE Alu 1 314 0 239 276 0 147 chr2 40675283 40675331 -212581252 - MER5A DNA MER1_type -80 109 86 2162 133 0 0 chr2 40675331 40675632 -212580951 - AluSx SINE Alu -11 301 1 239 276 0 147 chr2 40675632 40675699 -212580884 - MER5A DNA MER1_type -103 86 11 474 296 210 12 chr2 40676019 40676357 -212580226 + L2 LINE L2 1647 2051 -1263 340 314 230 17 chr2 40676363 40676659 -212579924 + L2 LINE L2 2529 2887 -427 520 143 0 0 chr2 40676659 40676743 -212579840 - AluJ/FRAM SINE Alu -8 304 221 800 293 80 27 chr2 40676743 40677118 -212579465 + L2 LINE L2 2879 3273 -40 496 241 126 53 chr2 40678056 40678263 -212578320 - L2 LINE L2 -357 2957 2736 1417 151 92 126 chr2 40678310 40678829 -212577754 + Charlie1 DNA MER1_type 2217 2718 -43 2121 87 0 28 chr2 40678829 40679147 -212577436 + AluSg1 SINE Alu 1 310 0 1417 151 92 126 chr2 40679147 40679189 -212577394 + Charlie1 DNA MER1_type 2718 2760 -1 2490 57 0 3 chr2 40681067 40681363 -212575220 + AluY SINE Alu 1 295 -16 202 250 0 54 chr2 40681495 40681551 -212575032 + MIR3 SINE MIR 141 193 -15 742 229 54 12 chr2 40681829 40681995 -212574588 + MER5A DNA MER1_type 17 189 0 1956 151 0 22 chr2 40682014 40682326 -212574257 - AluSx SINE Alu -5 307 3 24 53 0 0 chr2 40682400 40682438 -212574145 + AT_rich Low_complexity Low_complexity 1 38 0 2189 161 56 16 chr2 40682998 40683071 -212573512 + L1MB8 LINE L1 5208 5277 -901 2228 107 0 0 chr2 40683071 40683362 -212573221 + AluY SINE Alu 1 291 -20 2189 161 56 16 chr2 40683362 40684032 -212572551 + L1MB8 LINE L1 5277 6126 -52 843 173 0 0 chr2 40684049 40684205 -212572378 + L1MA9 LINE L1 5088 5243 -903 1875 106 84 0 chr2 40684205 40684480 -212572103 - AluSx SINE Alu -14 298 1 3396 138 43 20 chr2 40684489 40685091 -212571492 + L1MA9 LINE L1 5346 5961 -351 1821 177 0 10 chr2 40685097 40685397 -212571186 + AluJb SINE Alu 1 297 -15 2104 139 57 63 chr2 40685450 40685875 -212570708 - MSTB LTR MaLR -4 422 1 2410 92 3 0 chr2 40686389 40686694 -212569889 + AluSg SINE Alu 1 306 -4 1686 180 9 35 chr2 40686706 40687022 -212569561 + AluJb SINE Alu 3 310 -2 1948 135 3 44 chr2 40687126 40687445 -212569138 + AluJb SINE Alu 1 306 -6 4075 193 39 56 chr2 40687452 40688463 -212568120 + L1MB4 LINE L1 4323 5328 -852 2109 128 0 7 chr2 40688463 40688761 -212567822 + AluSq SINE Alu 3 298 -15 4075 193 39 56 chr2 40688761 40689164 -212567419 + L1MB4 LINE L1 5328 5736 -444 1064 192 0 0 chr2 40689175 40689373 -212567210 + L1MB4 LINE L1 5792 5989 -191 594 156 8 33 chr2 40689377 40689499 -212567084 + L1MB4 LINE L1 6062 6180 0 636 152 72 24 chr2 40689754 40689879 -212566704 - FLAM_C SINE Alu -1 132 2 21 0 0 0 chr2 40690002 40690023 -212566560 + AT_rich Low_complexity Low_complexity 1 21 0 1992 139 3 10 chr2 40690079 40690380 -212566203 + AluSx SINE Alu 1 299 -13 1538 162 0 12 chr2 40690400 40690647 -212565936 + AluJb SINE Alu 3 246 -66 261 0 0 0 chr2 40690648 40690677 -212565906 + (CA)n Simple_repeat Simple_repeat 2 30 0 2837 10 0 3 chr2 40690772 40691082 -212565501 + AluYa5 SINE Alu 1 309 -2 1423 262 79 14 chr2 40691659 40692090 -212564493 + LTR16B LTR ERVL 6 464 0 195 42 0 0 chr2 40692121 40692145 -212564438 + (A)n Simple_repeat Simple_repeat 1 24 0 504 257 162 35 chr2 40692493 40692839 -212563744 + L2 LINE L2 2368 2757 -557 231 114 0 0 chr2 40693005 40693040 -212563543 + (TTCA)n Simple_repeat Simple_repeat 4 38 0 1841 175 0 20 chr2 40693070 40693373 -212563210 + AluJo SINE Alu 1 297 -15 1786 186 0 0 chr2 40693380 40693701 -212562882 + AluJb SINE Alu 1 321 0 285 315 103 30 chr2 40694082 40694285 -212562298 + MIR SINE MIR 31 248 -14 280 192 267 20 chr2 40694334 40694480 -212562103 + L1M4 LINE L1 4663 4844 -1302 498 75 0 0 chr2 40694490 40694557 -212562026 + (TG)n Simple_repeat Simple_repeat 2 68 0 1632 167 62 20 chr2 40694561 40694867 -212561716 + MER2 DNA MER2_type 2 320 -25 402 127 0 0 chr2 40694959 40695014 -212561569 + MER66B LTR ERV1 292 346 -140 325 337 18 18 chr2 40695026 40695195 -212561388 + L1M4 LINE L1 4890 5058 -1088 236 253 60 0 chr2 40695199 40695282 -212561301 + L1M4 LINE L1 5080 5167 -979 971 134 0 0 chr2 40695282 40695416 -212561167 + AluSq/x SINE Alu 1 134 -179 2222 101 10 0 chr2 40695417 40695705 -212560878 + AluSx SINE Alu 1 291 -21 291 247 49 24 chr2 40695724 40695860 -212560723 + L1MC4 LINE L1 7779 8015 -27 1009 172 54 14 chr2 40695965 40696052 -212560531 - AluJo SINE Alu -82 230 148 2612 43 0 13 chr2 40696052 40696356 -212560227 - AluY SINE Alu -11 300 1 1009 172 54 14 chr2 40696356 40696489 -212560094 - AluJo SINE Alu -164 148 1 191 200 32 11 chr2 40696648 40696743 -212559840 + (TA)n Simple_repeat Simple_repeat 2 98 0 475 92 15 0 chr2 40697002 40697067 -212559516 + AluS SINE Alu 2 67 -246 2036 81 0 0 chr2 40697167 40697413 -212559170 - AluSc SINE Alu -63 246 1 514 236 34 91 chr2 40697934 40698142 -212558441 - MIR3 SINE MIR -7 201 6 691 132 9 0 chr2 40698151 40698257 -212558326 - AluSg/x SINE Alu -7 303 197 1599 159 39 12 chr2 40698264 40698521 -212558062 - AluJb SINE Alu -48 264 1 355 74 19 0 chr2 40698599 40698689 -212557894 + Alu SINE Alu 247 337 0 2179 116 7 0 chr2 40698794 40699112 -212557471 - AluSq SINE Alu 0 313 1 27 0 0 0 chr2 40699175 40699202 -212557381 + AT_rich Low_complexity Low_complexity 1 27 0 877 115 0 8 chr2 40699326 40699448 -212557135 + AluSq/x SINE Alu 14 134 -178 2250 95 10 7 chr2 40699577 40699881 -212556702 + AluSx SINE Alu 1 305 -7 360 0 0 0 chr2 40699882 40699922 -212556661 + (TA)n Simple_repeat Simple_repeat 1 40 0 1185 245 77 70 chr2 40699931 40700474 -212556109 - MLT1H LTR MaLR 0 549 3 1889 115 4 4 chr2 40701521 40701774 -212554809 + AluSx SINE Alu 1 253 -59 2272 96 13 0 chr2 40702167 40702470 -212554113 - AluSp SINE Alu -6 307 1 2146 110 3 17 chr2 40702470 40702770 -212553813 - AluSg SINE Alu -14 296 1 186 43 0 0 chr2 40702964 40702987 -212553596 + (GAA)n Simple_repeat Simple_repeat 2 24 0 505 324 55 34 chr2 40702995 40703044 -212553539 - L1MC4 LINE L1 -772 7270 7224 952 183 63 0 chr2 40703044 40703219 -212553364 + MER5A DNA MER1_type 2 187 -2 505 324 55 34 chr2 40703219 40703549 -212553034 - L1MC4 LINE L1 -818 7224 6883 56 55 0 0 chr2 40704197 40704288 -212552295 + GC_rich Low_complexity Low_complexity 1 91 0 252 59 0 0 chr2 40704493 40704527 -212552056 + (CCG)n Simple_repeat Simple_repeat 1 34 0 186 103 0 0 chr2 40704645 40704674 -212551909 + (GA)n Simple_repeat Simple_repeat 1 29 0 180 147 0 0 chr2 40705438 40705472 -212551111 - MIR SINE MIR -63 199 166 2265 98 0 10 chr2 40705670 40705967 -212550616 + AluSq SINE Alu 1 294 -19 294 29 0 0 chr2 40705970 40706005 -212550578 + (CA)n Simple_repeat Simple_repeat 2 36 0 686 86 0 0 chr2 40706010 40706103 -212550480 + AluS SINE Alu 2 94 -219 22 0 0 0 chr2 40706325 40706347 -212550236 + AT_rich Low_complexity Low_complexity 1 22 0 478 173 79 0 chr2 40706374 40706501 -212550082 + L1MB7 LINE L1 6045 6181 -3 1036 90 8 0 chr2 40706559 40706692 -212549891 + AluSq/x SINE Alu 2 135 -178 1953 142 0 0 chr2 40706692 40707003 -212549580 + AluSg SINE Alu 1 311 0 370 203 56 77 chr2 40707366 40707509 -212549074 + L1ME LINE L1 5620 5759 -362 1767 127 82 4 chr2 40707682 40707950 -212548633 - AluSx SINE Alu -23 289 1 502 200 0 0 chr2 40708119 40708204 -212548379 - AluSg/x SINE Alu -38 271 187 293 271 53 68 chr2 40708207 40708258 -212548325 - L1MC4a LINE L1 -1875 5933 5883 2147 145 3 0 chr2 40708258 40708562 -212548021 - AluJb SINE Alu -7 305 1 293 271 53 68 chr2 40708562 40708643 -212547940 - L1MC4a LINE L1 -1925 5883 5803 243 151 41 123 chr2 40708708 40708781 -212547802 + L1ME LINE L1 5830 5896 -225 2024 139 0 0 chr2 40709332 40709612 -212546971 + AluSx SINE Alu 1 280 -32 213 65 0 0 chr2 40709613 40709644 -212546939 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 704 177 0 57 chr2 40709769 40709910 -212546673 - FLAM_C SINE Alu 0 133 1 2438 192 101 9 chr2 40709919 40710456 -212546127 - L1MD3 LINE L1 0 7995 7410 479 197 1 11 chr2 40710457 40710557 -212546026 - MLT1F1 LTR MaLR -442 125 35 336 165 12 47 chr2 40710557 40710642 -212545941 - L1MD3 LINE L1 -879 7116 7035 247 284 136 0 chr2 40710770 40710851 -212545732 + MIR SINE MIR 19 110 -152 236 161 143 0 chr2 40710952 40711008 -212545575 + AluSc SINE Alu 236 299 0 2330 77 10 3 chr2 40711175 40711473 -212545110 - AluSq SINE Alu -13 300 1 266 345 167 19 chr2 40712114 40712378 -212544205 - L2 LINE L2 -4 3268 2966 952 253 39 32 chr2 40712715 40713000 -212543583 - MER102b DNA MER1_type -45 296 10 666 168 82 8 chr2 40715066 40715231 -212541352 + L1ME LINE L1 5634 5806 -358 1229 176 69 50 chr2 40715289 40715449 -212541134 + L1ME1 LINE L1 5657 5812 -354 2062 130 0 70 chr2 40715449 40715780 -212540803 + AluJb SINE Alu 1 308 -4 1229 176 69 50 chr2 40715780 40715939 -212540644 + L1ME1 LINE L1 5812 5980 -186 624 182 0 8 chr2 40715949 40716081 -212540502 + L1MA10 LINE L1 6203 6333 -1 2045 129 27 3 chr2 40716289 40716583 -212540000 + AluSx SINE Alu 1 301 -11 2445 90 6 0 chr2 40716585 40716896 -212539687 + AluSp SINE Alu 1 313 0 1095 189 0 5 chr2 40716907 40717103 -212539480 + AluJb SINE Alu 118 312 0 182 344 109 8 chr2 40717103 40717231 -212539352 - L2 LINE L2 -1321 1993 1853 263 267 208 0 chr2 40717491 40717592 -212538991 - MIR SINE MIR -49 213 92 202 139 0 23 chr2 40717609 40717652 -212538931 + (TTTTTA)n Simple_repeat Simple_repeat 2 43 0 1427 185 58 25 chr2 40717706 40717982 -212538601 + AluJo SINE Alu 2 286 -26 2028 130 13 7 chr2 40718123 40718430 -212538153 - AluSx SINE Alu -3 309 1 227 298 48 65 chr2 40718786 40718910 -212537673 + L2 LINE L2 3192 3313 0 2246 111 3 0 chr2 40719359 40719665 -212536918 + AluSx SINE Alu 6 312 0 2234 77 7 0 chr2 40719667 40719939 -212536644 + AluSq SINE Alu 28 301 -12 1987 121 8 0 chr2 40720610 40720874 -212535709 + AluSx SINE Alu 1 266 -46 275 296 0 10 chr2 40722365 40722463 -212534120 + (TA)n Simple_repeat Simple_repeat 2 98 0 1906 128 24 7 chr2 40722930 40723219 -212533364 - AluJb SINE Alu -17 295 2 966 153 38 0 chr2 40723344 40723501 -212533082 - AluJb SINE Alu -9 303 141 188 256 0 0 chr2 40723672 40723715 -212532868 + MIR SINE MIR 111 153 -55 2215 114 6 22 chr2 40723903 40724218 -212532365 + AluSx SINE Alu 1 310 -2 401 308 27 0 chr2 40724471 40724617 -212531966 + MIR SINE MIR 107 256 -6 1512 133 35 18 chr2 40724683 40724968 -212531615 + L1MA8 LINE L1 6002 6291 0 23 0 0 0 chr2 40726061 40726084 -212530499 + AT_rich Low_complexity Low_complexity 1 23 0 2053 125 7 3 chr2 40726084 40726373 -212530210 - AluSx SINE Alu -22 290 1 303 246 92 42 chr2 40726385 40726527 -212530056 - MIR3 SINE MIR -11 197 49 2210 110 0 0 chr2 40727214 40727496 -212529087 - AluSx SINE Alu -28 284 3 625 90 0 0 chr2 40728012 40728101 -212528482 - AluSx SINE Alu -9 303 215 1176 145 0 0 chr2 40728102 40728268 -212528315 - AluSx SINE Alu -146 166 1 1352 170 112 23 chr2 40728296 40728581 -212528002 - AluJb SINE Alu 0 308 1 2120 138 3 0 chr2 40728757 40729061 -212527522 + AluJb SINE Alu 1 305 -7 991 137 159 56 chr2 40729644 40729874 -212526709 + AluJo SINE Alu 5 268 -34 2237 98 7 10 chr2 40729874 40730171 -212526412 - AluSq SINE Alu -17 296 1 991 137 159 56 chr2 40730171 40730210 -212526373 + AluJo SINE Alu 268 302 0 2487 64 3 22 chr2 40730250 40730564 -212526019 - AluY SINE Alu -2 309 2 2275 53 0 4 chr2 40730674 40730939 -212525644 - AluY SINE Alu -47 264 1 2657 48 0 10 chr2 40731795 40732109 -212524474 - AluY SINE Alu 0 311 1 2134 89 7 0 chr2 40732202 40732535 -212524048 - AluSg SINE Alu 0 335 1 257 299 39 0 chr2 40733000 40733077 -212523506 + MIR SINE MIR 93 172 -90 877 158 0 0 chr2 40733216 40733349 -212523234 + FLAM_C SINE Alu 1 133 -10 1955 106 22 4 chr2 40733353 40733628 -212522955 + AluSx SINE Alu 3 282 -30 572 398 33 18 chr2 40733665 40734060 -212522523 - L2 LINE L2 -1863 1451 1051 207 0 0 0 chr2 40734061 40734084 -212522499 + (TAA)n Simple_repeat Simple_repeat 3 25 0 1997 139 0 40 chr2 40734220 40734543 -212522040 - AluSx SINE Alu -2 310 1 269 304 11 0 chr2 40734581 40734673 -212521910 + L1M4 LINE L1 3745 3837 -2309 1685 245 66 29 chr2 40734722 40735229 -212521354 - MLT1G3 LTR MaLR 0 530 20 3040 174 57 8 chr2 40735233 40735761 -212520822 - MLT2B3 LTR ERVL 0 554 1 25 0 0 0 chr2 40735794 40735819 -212520764 + AT_rich Low_complexity Low_complexity 1 25 0 354 137 0 0 chr2 40735847 40735898 -212520685 - ERVL-B3 LTR ERVL -32 5732 5682 1612 161 49 26 chr2 40735898 40736203 -212520380 + AluJo SINE Alu 1 312 0 230 0 33 0 chr2 40736205 40736235 -212520348 + (GGAA)n Simple_repeat Simple_repeat 1 31 0 7209 133 25 29 chr2 40736240 40736529 -212520054 - ERVL-B3 LTR ERVL -72 5692 5403 1793 165 4 0 chr2 40736529 40736808 -212519775 - AluJb SINE Alu -32 280 1 7209 133 25 29 chr2 40736808 40737697 -212518886 - ERVL-B3 LTR ERVL -361 5403 4519 274 137 118 0 chr2 40737740 40737791 -212518792 - MLT1G3 LTR MaLR -538 57 1 2919 120 3 111 chr2 40737866 40738390 -212518193 + L1MB2 LINE L1 5639 6095 -76 854 61 0 0 chr2 40738390 40738489 -212518094 + HY3 scRNA scRNA 1 99 -2 2919 120 3 111 chr2 40738489 40738549 -212518034 + L1MB2 LINE L1 6095 6160 -11 2092 146 3 0 chr2 40738551 40738853 -212517730 - AluSx SINE Alu -9 303 1 407 276 89 31 chr2 40739303 40739560 -212517023 + L1M4 LINE L1 4179 4450 -1696 2302 97 0 0 chr2 40740209 40740499 -212516084 + AluSg SINE Alu 1 290 -20 256 211 0 0 chr2 40740707 40740759 -212515824 - LTR16A LTR ERVL -8 442 391 2282 68 0 0 chr2 40740759 40741084 -212515499 + AluY SINE Alu 1 325 0 470 276 134 37 chr2 40741084 40741110 -212515473 - L1M4 LINE L1 -1082 5064 5042 2041 68 0 87 chr2 40741110 40741432 -212515151 - AluSc SINE Alu -15 294 1 470 276 134 37 chr2 40741432 40741868 -212514715 - L1M4 LINE L1 -1104 5042 4557 341 337 55 25 chr2 40742539 40742702 -212513881 - L2 LINE L2 -465 2849 2682 257 241 35 0 chr2 40743392 40743450 -212513133 - L3 LINE CR1 -5 1572 1513 562 269 155 63 chr2 40743552 40743660 -212512923 - L2 LINE L2 -1 3312 3215 2255 115 7 0 chr2 40743660 40743964 -212512619 + AluSx SINE Alu 1 306 -6 562 269 155 63 chr2 40743964 40744395 -212512188 - L2 LINE L2 -98 3215 2727 278 234 130 13 chr2 40744397 40744474 -212512109 - L3 LINE CR1 -248 1329 1244 1266 112 0 0 chr2 40744474 40744643 -212511940 + AluSg SINE Alu 1 169 -141 379 215 69 62 chr2 40744745 40744875 -212511708 + MIR SINE MIR 82 212 -50 2238 90 0 27 chr2 40744948 40745248 -212511335 + AluSx SINE Alu 1 292 -20 2267 118 0 0 chr2 40746587 40746892 -212509691 + AluSx SINE Alu 1 305 -7 837 175 36 72 chr2 40747140 40747363 -212509220 - L1ME2 LINE L1 -2 6162 5948 1455 126 51 12 chr2 40747363 40747795 -212508788 - LTR54 LTR ERV1 0 510 1 355 185 92 85 chr2 40747802 40747932 -212508651 - L1ME2 LINE L1 -220 5944 5814 4595 143 27 4 chr2 40747946 40748715 -212507868 - L1MB4 LINE L1 -6 6174 5388 2392 76 0 13 chr2 40748809 40749124 -212507459 - AluY SINE Alu 0 311 1 1555 106 208 0 chr2 40749126 40749371 -212507212 - AluSq SINE Alu -17 296 1 2334 89 0 7 chr2 40749491 40749795 -212506788 - AluY SINE Alu -9 302 1 32 26 0 0 chr2 40749854 40749893 -212506690 + AT_rich Low_complexity Low_complexity 1 39 0 2736 195 52 6 chr2 40750102 40750619 -212505964 - MLT1F LTR MaLR 0 542 2 920 141 0 0 chr2 40750835 40750970 -212505613 + FLAM_C SINE Alu 5 139 -4 1540 155 65 47 chr2 40751387 40751696 -212504887 + AluJo SINE Alu 3 316 0 23 0 0 0 chr2 40751840 40751863 -212504720 + AT_rich Low_complexity Low_complexity 1 23 0 2199 104 7 7 chr2 40752211 40752509 -212504074 - AluSq SINE Alu -15 298 1 1049 98 0 0 chr2 40752523 40752656 -212503927 - AluSq/x SINE Alu -179 133 1 308 269 57 77 chr2 40752781 40752913 -212503670 + MLT1H LTR MaLR 18 151 -398 2164 106 0 7 chr2 40752913 40753206 -212503377 - AluSg SINE Alu -19 291 1 308 269 57 77 chr2 40753206 40753343 -212503240 + MLT1H LTR MaLR 151 330 -219 641 182 94 130 chr2 40753354 40753662 -212502921 + MLT1H1 LTR MaLR 259 555 0 221 245 19 0 chr2 40753741 40753794 -212502789 + GA-rich Low_complexity Low_complexity 1 54 0 243 88 0 0 chr2 40753948 40753982 -212502601 + (T)n Simple_repeat Simple_repeat 1 34 0 623 219 80 110 chr2 40754145 40754446 -212502137 + MLT1I LTR MaLR 101 392 -17 286 277 82 94 chr2 40754466 40754484 -212502099 + HAL1 LINE L1 1434 1451 -1056 1831 147 3 11 chr2 40754484 40754798 -212501785 + AluSx SINE Alu 1 312 0 286 277 82 94 chr2 40754798 40754957 -212501626 + HAL1 LINE L1 1451 1611 -896 616 220 23 15 chr2 40754957 40755089 -212501494 + FLAM_A SINE Alu 1 133 0 286 277 82 94 chr2 40755089 40755165 -212501418 + HAL1 LINE L1 1611 1686 -821 620 283 39 5 chr2 40755281 40755486 -212501097 + L1ME LINE L1 5533 5744 -377 1025 106 0 0 chr2 40755490 40755622 -212500961 + FLAM_C SINE Alu 1 132 -1 283 60 40 20 chr2 40755627 40755677 -212500906 + (GAAA)n Simple_repeat Simple_repeat 4 54 0 796 156 0 0 chr2 40755925 40756047 -212500536 - AluSg/x SINE Alu -1 308 187 248 277 14 85 chr2 40756050 40756109 -212500474 - L1MC4a LINE L1 -1875 5933 5871 1988 166 3 0 chr2 40756109 40756405 -212500178 - AluJb SINE Alu -15 297 1 248 277 14 85 chr2 40756405 40756486 -212500097 - L1MC4a LINE L1 -1937 5871 5803 762 238 21 47 chr2 40757051 40757244 -212499339 + MER5A DNA MER1_type 2 189 0 503 130 272 0 chr2 40757557 40757649 -212498934 + FLAM_C SINE Alu 1 117 -26 2165 120 13 0 chr2 40758122 40758422 -212498161 - AluSx SINE Alu -8 304 1 839 294 54 49 chr2 40758469 40758935 -212497648 + L2 LINE L2 1840 2307 -1007 1351 246 46 11 chr2 40758948 40759298 -212497285 + MLT1C LTR MaLR 1 362 -105 1764 175 7 29 chr2 40759417 40759726 -212496857 - AluJo SINE Alu -10 302 1 2050 103 43 4 chr2 40760435 40760716 -212495867 + AluSc SINE Alu 1 292 -17 426 296 25 27 chr2 40761388 40761569 -212495014 - MER5A DNA MER1_type 0 189 1 333 118 0 0 chr2 40762132 40762183 -212494400 + (TG)n Simple_repeat Simple_repeat 2 52 0 1628 192 3 3 chr2 40762184 40762470 -212494113 - AluJo SINE Alu -26 286 1 21 36 0 0 chr2 40762528 40762556 -212494027 + AT_rich Low_complexity Low_complexity 1 28 0 248 292 0 0 chr2 40762563 40762652 -212493931 + L1MC4 LINE L1 6614 6702 -1340 227 229 0 14 chr2 40762592 40762662 -212493921 - L1MCa LINE L1 -4362 2064 1996 * 268 626 0 11 chr2 40762663 40762837 -212493746 + (TA)n Simple_repeat Simple_repeat 2 173 0 1979 75 21 18 chr2 40762838 40763119 -212493464 - AluY SINE Alu -29 282 1 2159 125 74 11 chr2 40764344 40764697 -212491886 + THE1C LTR MaLR 1 375 0 842 211 6 0 chr2 40764758 40764919 -212491664 + AluJb SINE Alu 137 298 -14 2266 110 0 0 chr2 40765144 40765464 -212491119 + AluSx SINE Alu 1 320 0 2406 84 3 7 chr2 40765639 40765949 -212490634 + AluSc SINE Alu 1 309 0 1242 175 0 10 chr2 40766060 40766266 -212490317 - AluJb SINE Alu -24 288 85 507 224 35 17 chr2 40766267 40766383 -212490200 - MIR SINE MIR -100 162 45 349 327 6 42 chr2 40766667 40766841 -212489742 + MIR SINE MIR 42 206 -56 1547 203 19 25 chr2 40766958 40767278 -212489305 + MER58B DNA MER1_type 24 341 0 33 0 0 0 chr2 40767572 40767605 -212488978 + AT_rich Low_complexity Low_complexity 1 33 0 1894 200 59 41 chr2 40768192 40768476 -212488107 + MLT1C LTR MaLR 1 298 -169 1832 166 20 0 chr2 40768476 40768772 -212487811 + AluSx SINE Alu 1 302 -10 1894 200 59 41 chr2 40768772 40768946 -212487637 + MLT1C LTR MaLR 298 467 0 472 258 52 7 chr2 40769558 40769713 -212486870 - L1ME4a LINE L1 -3 6118 5957 1137 151 9 57 chr2 40769732 40769944 -212486639 - AluJo SINE Alu -23 289 88 372 273 67 7 chr2 40769960 40770110 -212486473 - L1ME4a LINE L1 -205 5916 5758 1888 160 0 10 chr2 40770202 40770509 -212486074 + AluJb SINE Alu 1 304 -8 838 150 8 23 chr2 40770512 40770645 -212485938 + FLAM_C SINE Alu 2 132 -1 2275 88 3 0 chr2 40770716 40771034 -212485549 - AluSp SINE Alu 0 319 1 427 237 130 44 chr2 40771044 40771447 -212485136 - L1ME4a LINE L1 -11 6110 5612 1577 150 20 72 chr2 40771535 40771841 -212484742 + AluJb SINE Alu 1 290 -22 256 217 141 49 chr2 40771867 40772051 -212484532 - L1ME4a LINE L1 -2340 5468 5268 4763 146 26 12 chr2 40772154 40772970 -212483613 - L1MB4 LINE L1 -1 6179 5353 961 169 0 6 chr2 40773001 40773167 -212483416 - AluSg/x SINE Alu -11 301 137 1266 141 0 0 chr2 40773212 40773410 -212483173 + L1PB1 LINE L1 1 198 -6665 * 15643 168 57 26 chr2 40773406 40773972 -212482611 + L1PB1 LINE L1 995 1542 -5325 2188 116 3 0 chr2 40773972 40774266 -212482317 - AluSx SINE Alu -17 295 1 15643 168 57 26 chr2 40774266 40779309 -212477274 + L1PB1 LINE L1 1542 6428 -439 1858 151 0 0 chr2 40779309 40779587 -212476996 + AluSx SINE Alu 1 278 -34 15643 168 57 26 chr2 40779587 40779598 -212476985 + L1PB1 LINE L1 6428 6437 -430 414 0 0 0 chr2 40779598 40779644 -212476939 + (CAAAA)n Simple_repeat Simple_repeat 3 48 0 15643 168 57 26 chr2 40779644 40779704 -212476879 + L1PB1 LINE L1 6437 6867 0 1826 194 62 2 chr2 40779711 40780112 -212476471 - L1MB4 LINE L1 -797 5349 4925 381 261 58 7 chr2 40780934 40781072 -212475511 - L1ME4a LINE L1 -199 5922 5778 34 72 0 0 chr2 40782152 40782221 -212474362 + AT_rich Low_complexity Low_complexity 1 69 0 1660 184 16 7 chr2 40782255 40782559 -212474024 + AluJo SINE Alu 1 307 -5 522 191 13 138 chr2 40782775 40782838 -212473745 + MER94 DNA DNA 1 36 -98 2298 75 10 3 chr2 40782838 40783146 -212473437 + AluY SINE Alu 1 310 -1 522 191 13 138 chr2 40783146 40783234 -212473349 + MER94 DNA DNA 36 133 -1 2105 69 9 87 chr2 40783402 40783735 -212472848 - AluSx SINE Alu -3 309 3 182 222 16 79 chr2 40784036 40784099 -212472484 - MIR SINE MIR -40 222 164 1755 171 3 0 chr2 40784459 40784751 -212471832 + AluJb SINE Alu 1 293 -19 2222 115 0 0 chr2 40785175 40785479 -212471104 + AluSx SINE Alu 1 304 -8 28 0 0 0 chr2 40785479 40785507 -212471076 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 40785662 40785683 -212470900 + AT_rich Low_complexity Low_complexity 1 21 0 2222 84 7 10 chr2 40785702 40785998 -212470585 - AluSq SINE Alu -18 295 1 189 0 0 0 chr2 40786057 40786078 -212470505 + (T)n Simple_repeat Simple_repeat 1 21 0 1638 185 10 45 chr2 40786374 40786688 -212469895 + AluJb SINE Alu 1 303 -9 433 210 239 36 chr2 40786855 40786993 -212469590 - MER5A DNA MER1_type -2 187 11 2067 134 0 10 chr2 40787354 40787646 -212468937 - AluSx SINE Alu -23 289 1 183 100 0 0 chr2 40787839 40787869 -212468714 + (TCCA)n Simple_repeat Simple_repeat 1 30 0 183 321 75 28 chr2 40787870 40787976 -212468607 - L2 LINE L2 -6 3307 3197 1485 152 95 8 chr2 40788481 40788745 -212467838 + AluJo SINE Alu 1 287 -25 262 212 30 10 chr2 40788748 40788850 -212467733 + L1MC4a LINE L1 6851 6911 -897 349 207 121 4 chr2 40788965 40789100 -212467483 + L1MC4 LINE L1 7085 7233 -728 421 226 48 0 chr2 40789236 40789360 -212467223 + L1MC5 LINE L1 7261 7390 -571 1050 163 0 6 chr2 40789398 40789570 -212467013 + MER5A DNA MER1_type 17 187 -2 2565 54 0 0 chr2 40789590 40789888 -212466695 - AluY SINE Alu -13 298 1 1840 156 3 7 chr2 40790027 40790316 -212466267 - AluSx SINE Alu -24 288 1 698 146 9 0 chr2 40790515 40790625 -212465958 - FLAM_C SINE Alu -18 125 15 181 164 66 0 chr2 40791076 40791137 -212465446 + A-rich Low_complexity Low_complexity 5 69 0 2043 128 0 17 chr2 40791245 40791578 -212465005 - AluSx SINE Alu 0 328 1 305 256 102 34 chr2 40791789 40791965 -212464618 - L1MC/D LINE L1 -2014 5794 5607 522 245 53 50 chr2 40792410 40792712 -212463871 - L1MC/D LINE L1 -575 5587 5285 23 0 0 0 chr2 40792879 40792902 -212463681 + AT_rich Low_complexity Low_complexity 1 23 0 493 218 92 28 chr2 40793378 40793520 -212463063 + MIR SINE MIR 1 151 -111 398 283 254 31 chr2 40793642 40793992 -212462591 - L2 LINE L2 -337 2977 2550 301 213 0 0 chr2 40794589 40794650 -212461933 - MADE1 DNA Mariner 0 80 20 366 329 33 13 chr2 40794897 40795049 -212461534 + L2 LINE L2 2763 2917 -397 2274 95 3 0 chr2 40795049 40795388 -212461195 - AluSp SINE Alu 0 340 1 204 158 0 0 chr2 40795429 40795467 -212461116 + T-rich Low_complexity Low_complexity 4 41 0 2699 151 34 55 chr2 40795503 40795575 -212461008 + MLT2B2 LTR ERVL 2 74 -441 1496 188 27 14 chr2 40795575 40795867 -212460716 + AluJo SINE Alu 2 297 -15 2699 151 34 55 chr2 40795867 40796319 -212460264 + MLT2B2 LTR ERVL 74 515 0 409 306 41 0 chr2 40796397 40796495 -212460088 + L2 LINE L2 3148 3249 -23 263 288 135 0 chr2 40796497 40796608 -212459975 + LTR67 LTR ERVL 432 557 0 1898 149 3 3 chr2 40796757 40797076 -212459507 - AluSx SINE Alu 0 319 1 377 317 56 29 chr2 40797635 40797941 -212458642 + ERVL LTR ERVL 818 1131 -4633 2309 87 10 7 chr2 40797942 40798242 -212458341 - AluSx SINE Alu -11 301 1 2283 89 0 10 chr2 40798332 40798670 -212457913 - AluY SINE Alu 0 335 1 236 283 38 28 chr2 40798790 40798896 -212457687 - HAL1 LINE L1 -2399 108 2 342 309 197 55 chr2 40799095 40799425 -212457158 + L2 LINE L2 2896 3272 0 182 273 61 40 chr2 40799424 40799523 -212457060 - L2 LINE L2 -52 3261 3161 * 1926 142 0 0 chr2 40799663 40799971 -212456612 + AluSx SINE Alu 1 308 0 22 0 0 0 chr2 40800194 40800216 -212456367 + AT_rich Low_complexity Low_complexity 1 22 0 31 44 0 0 chr2 40800301 40800346 -212456237 + AT_rich Low_complexity Low_complexity 1 45 0 789 271 50 34 chr2 40800424 40800942 -212455641 - L1ME4a LINE L1 -237 5884 5351 1669 154 56 0 chr2 40800986 40801253 -212455330 - AluJb SINE Alu -30 282 1 22 35 0 0 chr2 40801382 40801411 -212455172 + AT_rich Low_complexity Low_complexity 1 29 0 423 304 87 33 chr2 40801622 40801854 -212454729 - L1ME4a LINE L1 -1525 4621 4403 1886 144 48 0 chr2 40801854 40802146 -212454437 - AluSx SINE Alu -6 306 1 423 304 87 33 chr2 40802146 40802489 -212454094 - L1ME4a LINE L1 -1743 4403 4015 2093 79 0 22 chr2 40802506 40802773 -212453810 + AluSg1 SINE Alu 31 291 -18 336 40 80 0 chr2 40803774 40803849 -212452734 + (TA)n Simple_repeat Simple_repeat 2 82 0 287 224 0 0 chr2 40804033 40804091 -212452492 + MER94 DNA DNA 75 132 -2 288 248 43 99 chr2 40804101 40804139 -212452444 + MER94 DNA DNA 1 40 -94 1691 135 30 63 chr2 40804139 40804442 -212452141 - AluSx SINE Alu -19 293 1 288 248 43 99 chr2 40804442 40804544 -212452039 + MER94 DNA DNA 40 133 -1 524 188 0 0 chr2 40804845 40804941 -212451642 + FLAM_A SINE Alu 43 138 -4 190 260 73 42 chr2 40805167 40805263 -212451320 - MIR SINE MIR -99 163 65 475 247 187 0 chr2 40805913 40806063 -212450520 + MER5A DNA MER1_type 12 189 0 244 299 11 11 chr2 40806063 40806150 -212450433 + MIR3 SINE MIR 112 198 -10 1714 120 139 0 chr2 40807454 40807713 -212448870 + AluSp SINE Alu 1 295 -18 279 211 70 0 chr2 40808116 40808187 -212448396 - MIR SINE MIR -83 179 104 2191 100 0 7 chr2 40808284 40808573 -212448010 + AluSx SINE Alu 1 287 -25 243 0 0 0 chr2 40808576 40808603 -212447980 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 878 218 0 0 chr2 40809127 40809283 -212447300 + FRAM SINE Alu 1 156 -10 254 353 35 17 chr2 40809758 40809874 -212446709 + L2 LINE L2 2259 2376 -938 2458 90 0 0 chr2 40810120 40810431 -212446152 + AluY SINE Alu 1 311 0 180 71 0 0 chr2 40811236 40811258 -212445325 + (TA)n Simple_repeat Simple_repeat 2 24 0 2281 97 3 7 chr2 40811258 40811568 -212445015 - AluSc SINE Alu 0 309 1 629 284 112 47 chr2 40811769 40812247 -212444336 + HAL1b LINE L1 58 598 -750 1544 182 56 18 chr2 40812247 40812533 -212444050 - AluJo SINE Alu -15 297 1 629 284 112 47 chr2 40812533 40812761 -212443822 + HAL1b LINE L1 598 810 -538 1375 186 4 32 chr2 40812856 40813104 -212443479 + AluJo SINE Alu 39 279 -33 201 94 0 0 chr2 40813109 40813141 -212443442 + (CAA)n Simple_repeat Simple_repeat 2 33 0 271 136 34 17 chr2 40813146 40813205 -212443378 + L1ME1 LINE L1 1020 1079 -5467 1687 246 44 20 chr2 40813241 40813967 -212442616 + L1ME1 LINE L1 1059 1709 -4833 * 5343 190 46 118 chr2 40813961 40814929 -212441654 + L1ME1 LINE L1 3663 4699 -1965 693 202 0 8 chr2 40814929 40815053 -212441530 + FLAM_C SINE Alu 1 123 -20 5343 190 46 118 chr2 40815053 40815504 -212441079 + L1ME1 LINE L1 4699 5181 -1483 1714 176 3 10 chr2 40815504 40815794 -212440789 + AluJo SINE Alu 1 288 -24 5343 190 46 118 chr2 40815794 40816098 -212440485 + L1ME1 LINE L1 5181 5505 -1159 2270 133 0 0 chr2 40816098 40816407 -212440176 - AluSx SINE Alu -3 309 1 5343 190 46 118 chr2 40816407 40817163 -212439420 + L1ME1 LINE L1 5505 6314 -350 2383 90 0 0 chr2 40817163 40817453 -212439130 + AluSx SINE Alu 1 290 -22 5343 190 46 118 chr2 40817453 40817490 -212439093 + L1ME1 LINE L1 6314 6352 -312 1959 84 66 7 chr2 40817490 40817600 -212438983 + AluSx SINE Alu 12 114 -198 261 0 0 0 chr2 40817600 40817629 -212438954 + (TAAAA)n Simple_repeat Simple_repeat 1 29 0 1959 84 66 7 chr2 40817629 40817791 -212438792 + AluSx SINE Alu 114 300 -12 5343 190 46 118 chr2 40817791 40818155 -212438428 + L1ME1 LINE L1 6352 6441 -223 1772 191 72 39 chr2 40818163 40818646 -212437937 + L1MC4 LINE L1 7432 7930 -112 1817 132 12 55 chr2 40818836 40819162 -212437421 - AluSx SINE Alu 0 312 1 1946 162 0 13 chr2 40819632 40819946 -212436637 + AluJb SINE Alu 2 311 -1 197 394 41 12 chr2 40820367 40820537 -212436046 - L2 LINE L2 -454 2860 2686 1741 184 17 14 chr2 40821184 40821477 -212435106 - AluJo SINE Alu -18 294 1 755 266 89 5 chr2 40821930 40822144 -212434439 + MIR SINE MIR 1 232 -30 231 284 62 37 chr2 40822456 40822537 -212434046 + MER5A DNA MER1_type 89 171 -18 293 337 11 11 chr2 40822577 40822669 -212433914 - MER5A DNA MER1_type 0 189 98 908 243 18 9 chr2 40823232 40823454 -212433129 - MER58A DNA MER1_type 0 224 1 2118 167 103 11 chr2 40825466 40825932 -212430651 - LTR22 LTR ERVK 0 509 1 203 290 131 70 chr2 40826705 40826919 -212429664 + MIR SINE MIR 10 236 -26 2157 85 0 20 chr2 40827571 40827865 -212428718 - AluSc SINE Alu -21 288 1 535 305 150 9 chr2 40827877 40828090 -212428493 - MIR SINE MIR -18 244 2 839 181 0 0 chr2 40829180 40829313 -212427270 - AluSq/x SINE Alu -180 133 1 446 292 52 14 chr2 40829606 40829760 -212426823 - L1ME LINE L1 -398 5768 5611 468 279 144 15 chr2 40829775 40830116 -212426467 - L1ME LINE L1 -1117 5029 4645 883 135 0 0 chr2 40830133 40830259 -212426324 - FLAM_C SINE Alu -17 126 1 615 294 149 20 chr2 40830260 40831158 -212425425 - L1ME LINE L1 -1488 4658 3645 2070 86 21 0 chr2 40831952 40832231 -212424352 + AluSg SINE Alu 1 285 -25 356 229 14 0 chr2 40833014 40833084 -212423499 + MER5A DNA MER1_type 3 73 -116 812 188 117 56 chr2 40833085 40833282 -212423301 - AluJo SINE Alu -18 294 86 603 277 72 0 chr2 40833302 40833468 -212423115 + MER5A DNA MER1_type 12 189 0 23 33 0 0 chr2 40833874 40833904 -212422679 + AT_rich Low_complexity Low_complexity 1 30 0 1730 173 0 7 chr2 40834206 40834490 -212422093 - AluJo SINE Alu -30 282 1 433 282 138 6 chr2 40835047 40835228 -212421355 - MIR3 SINE MIR -1 207 3 24 32 0 0 chr2 40835388 40835419 -212421164 + AT_rich Low_complexity Low_complexity 1 31 0 664 256 89 31 chr2 40835456 40835935 -212420648 + L1ME3A LINE L1 5377 5952 -218 235 259 36 9 chr2 40836086 40836198 -212420385 - L1M4 LINE L1 -1695 4451 4337 227 344 97 11 chr2 40836758 40836851 -212419732 + L2 LINE L2 3163 3263 -9 1988 102 46 0 chr2 40836897 40837180 -212419403 + AluSx SINE Alu 1 296 -16 2524 26 0 23 chr2 40837347 40837653 -212418930 - AluY SINE Alu -12 299 1 28 61 0 0 chr2 40838784 40838833 -212417750 + AT_rich Low_complexity Low_complexity 1 49 0 206 104 21 42 chr2 40839449 40839497 -212417086 + (CAAAA)n Simple_repeat Simple_repeat 4 50 0 2053 110 0 29 chr2 40841464 40841773 -212414810 + AluSg SINE Alu 1 300 -10 228 193 125 68 chr2 40841779 40841867 -212414716 + L1 LINE L1 4951 5043 -1103 1974 138 3 0 chr2 40842398 40842695 -212413888 - AluSx SINE Alu -14 298 1 1883 114 0 4 chr2 40842702 40842966 -212413617 - AluSx SINE Alu 0 312 50 24 0 0 0 chr2 40842989 40843013 -212413570 + AT_rich Low_complexity Low_complexity 1 24 0 590 111 37 56 chr2 40843019 40843127 -212413456 - AluJb SINE Alu -195 117 12 28 0 0 0 chr2 40843328 40843356 -212413227 + AT_rich Low_complexity Low_complexity 1 28 0 220 211 237 0 chr2 40843429 40843505 -212413078 - MIR SINE MIR -12 250 157 1010 134 0 0 chr2 40843545 40843694 -212412889 - AluSg/x SINE Alu -8 304 156 395 299 134 0 chr2 40844558 40844715 -212411868 - MIR SINE MIR -13 249 72 293 368 0 21 chr2 40845119 40845214 -212411369 - MIR SINE MIR -149 113 21 1742 164 0 18 chr2 40845683 40845969 -212410614 - AluJo SINE Alu -29 283 3 21 57 0 0 chr2 40847136 40847171 -212409412 + AT_rich Low_complexity Low_complexity 1 35 0 970 188 21 5 chr2 40847307 40847493 -212409090 + MER5A DNA MER1_type 1 189 0 21 0 0 0 chr2 40847737 40847758 -212408825 + AT_rich Low_complexity Low_complexity 1 21 0 2432 64 0 13 chr2 40848281 40848594 -212407989 - AluY SINE Alu -2 309 1 578 267 160 11 chr2 40848739 40848926 -212407657 + MIR SINE MIR 44 258 -4 1642 174 20 3 chr2 40849279 40849578 -212407005 + AluJb SINE Alu 1 304 -8 2161 118 3 0 chr2 40849940 40850246 -212406337 - AluSx SINE Alu -5 307 1 263 318 78 36 chr2 40850291 40850483 -212406100 + L2 LINE L2 2325 2524 -790 958 286 20 8 chr2 40850544 40850799 -212405784 + MIR SINE MIR 3 260 -2 294 322 23 0 chr2 40850822 40850909 -212405674 - MER20B DNA MER1_type -642 141 53 1035 161 16 10 chr2 40850909 40851101 -212405482 + L1MB8 LINE L1 5980 6172 -6 287 292 166 86 chr2 40851276 40851625 -212404958 + L2 LINE L2 2844 3220 -52 2185 109 0 3 chr2 40851646 40851939 -212404644 - AluSq SINE Alu -20 293 2 569 125 240 0 chr2 40851970 40852074 -212404509 + AluSg SINE Alu 5 133 -177 1939 113 36 0 chr2 40852074 40852383 -212404200 + AluSq SINE Alu 1 319 0 21 57 0 0 chr2 40852441 40852476 -212404107 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 40852594 40852615 -212403968 + AT_rich Low_complexity Low_complexity 1 21 0 474 164 58 10 chr2 40853136 40853240 -212403343 - MER50 LTR ERV1 -135 599 491 183 358 114 32 chr2 40853364 40853487 -212403096 + MIR SINE MIR 16 148 -114 1497 190 13 20 chr2 40853748 40854048 -212402535 + AluJo SINE Alu 6 303 -9 23 0 0 0 chr2 40854210 40854233 -212402350 + AT_rich Low_complexity Low_complexity 1 23 0 53 49 0 0 chr2 40855841 40855922 -212400661 + AT_rich Low_complexity Low_complexity 1 81 0 2033 125 7 10 chr2 40855986 40856290 -212400293 + AluSx SINE Alu 1 303 -9 1139 155 0 0 chr2 40856293 40856454 -212400129 + AluSx SINE Alu 4 164 -148 456 268 121 60 chr2 40857017 40857720 -212398863 - L1ME3A LINE L1 -318 5852 5131 21 71 0 0 chr2 40858156 40858198 -212398385 + AT_rich Low_complexity Low_complexity 1 42 0 1969 142 10 0 chr2 40858226 40858535 -212398048 - AluSx SINE Alu 0 312 1 24 0 0 51 chr2 40858615 40858638 -212397945 + AT_rich Low_complexity Low_complexity 1 24 -13 2190 100 0 0 chr2 40858638 40858953 -212397630 + AluSg SINE Alu 1 315 0 24 0 0 51 chr2 40858953 40858967 -212397616 + AT_rich Low_complexity Low_complexity 24 37 0 1587 181 4 7 chr2 40858974 40859250 -212397333 - AluJo SINE Alu -21 291 17 2116 122 9 32 chr2 40860141 40860486 -212396097 - MER1B DNA MER1_type 0 337 1 2129 102 3 33 chr2 40861373 40861677 -212394906 - AluSq SINE Alu -18 295 1 2284 64 0 0 chr2 40862845 40863153 -212393430 + AluY SINE Alu 1 308 0 24 85 0 0 chr2 40863633 40863692 -212392891 + AT_rich Low_complexity Low_complexity 1 59 0 2096 114 7 7 chr2 40863877 40864185 -212392398 + AluSx SINE Alu 1 308 -4 2461 105 18 52 chr2 40864591 40864863 -212391720 + L1MA5A LINE L1 5853 6104 -193 1887 97 60 43 chr2 40864863 40865162 -212391421 + AluY SINE Alu 1 304 -7 2461 105 18 52 chr2 40865162 40865347 -212391236 + L1MA5A LINE L1 6104 6294 -3 1558 153 41 17 chr2 40865678 40865972 -212390611 + AluJb SINE Alu 1 301 -11 219 235 0 20 chr2 40865999 40866050 -212390533 - MIR SINE MIR -127 135 86 1386 204 80 47 chr2 40866327 40866689 -212389894 + MLT1B LTR MaLR 5 378 -12 865 148 39 13 chr2 40867052 40867207 -212389376 + FRAM SINE Alu 2 160 -6 539 364 18 19 chr2 40868590 40868840 -212387743 + MIR SINE MIR 6 252 -10 1433 194 46 28 chr2 40868879 40869204 -212387379 + Charlie1b DNA MER1_type 2 332 -191 751 177 83 0 chr2 40869382 40869574 -212387009 + Charlie1b DNA MER1_type 316 523 0 2028 123 7 26 chr2 40869790 40870098 -212386485 - AluSx SINE Alu -10 302 1 385 259 176 0 chr2 40870877 40871047 -212385536 - MIR SINE MIR 0 262 63 2342 92 0 0 chr2 40871187 40871492 -212385091 - AluSq SINE Alu -8 305 1 1957 117 10 10 chr2 40872757 40873057 -212383526 + AluSq SINE Alu 2 301 -12 216 338 14 0 chr2 40873258 40873329 -212383254 + L2 LINE L2 3185 3256 -16 25 0 0 0 chr2 40873739 40873764 -212382819 + AT_rich Low_complexity Low_complexity 1 25 0 25 31 0 0 chr2 40873933 40873965 -212382618 + AT_rich Low_complexity Low_complexity 1 32 0 196 292 82 124 chr2 40874775 40875042 -212381541 + L2 LINE L2 3008 3263 -9 2388 67 0 13 chr2 40875816 40876129 -212380454 + AluSc SINE Alu 1 309 0 2036 126 7 10 chr2 40877607 40877909 -212378674 - AluSx SINE Alu -9 303 3 3845 147 38 35 chr2 40878578 40879315 -212377268 + L1MB3 LINE L1 5445 6183 0 513 299 242 5 chr2 40879414 40879625 -212376958 + MIR SINE MIR 2 262 0 2329 84 3 3 chr2 40879905 40880202 -212376381 - AluSc SINE Alu -12 297 1 276 203 49 32 chr2 40881548 40881671 -212374912 + (TATATG)n Simple_repeat Simple_repeat 4 128 0 29 0 0 0 chr2 40883024 40883053 -212373530 + AT_rich Low_complexity Low_complexity 1 29 0 1134 190 4 18 chr2 40883198 40883424 -212373159 - AluJo SINE Alu -12 300 78 2381 74 0 3 chr2 40883623 40883932 -212372651 - AluY SINE Alu -3 308 1 5193 124 37 37 chr2 40884066 40884988 -212371595 - L1MA4 LINE L1 -20 6280 5359 2177 106 0 3 chr2 40885150 40885453 -212371130 - AluSx SINE Alu -10 302 1 1612 189 174 21 chr2 40885508 40885932 -212370651 + MLT1F LTR MaLR 1 489 -53 339 291 108 7 chr2 40885940 40886088 -212370495 + L1MEc LINE L1 1655 1817 -4579 296 221 59 0 chr2 40886159 40886227 -212370356 + MLT1F LTR MaLR 496 567 0 204 358 49 12 chr2 40886956 40887037 -212369546 + L2 LINE L2 3103 3186 -86 1350 121 14 14 chr2 40887286 40887509 -212369074 - L1PA13 LINE L1 0 6163 5941 438 130 11 22 chr2 40887518 40887610 -212368973 + CT-rich Low_complexity Low_complexity 1 91 0 1765 138 0 8 chr2 40887620 40887888 -212368695 - AluSx SINE Alu -46 266 1 1858 164 3 0 chr2 40888112 40888404 -212368179 - AluSx SINE Alu -19 293 1 281 305 54 36 chr2 40888805 40888972 -212367611 - MER5A DNA MER1_type -1 188 19 295 311 67 30 chr2 40888818 40888953 -212367630 + MER5B DNA MER1_type 15 154 -24 371 221 267 15 chr2 40888977 40889108 -212367475 + MER5A DNA MER1_type 7 170 -19 21 0 0 0 chr2 40889589 40889610 -212366973 + AT_rich Low_complexity Low_complexity 1 21 0 23 68 0 0 chr2 40889929 40889973 -212366610 + AT_rich Low_complexity Low_complexity 1 44 0 24 0 0 0 chr2 40890121 40890145 -212366438 + AT_rich Low_complexity Low_complexity 1 24 0 5336 110 46 16 chr2 40890974 40892484 -212364099 + L1PA15 LINE L1 4628 6165 0 1198 167 5 18 chr2 40892995 40893216 -212363367 + MER20 DNA MER1_type 1 218 -1 954 191 176 10 chr2 40893424 40893628 -212362955 - MER8 DNA MER2_type 0 239 2 190 286 0 0 chr2 40894106 40894155 -212362428 + L2 LINE L2 3024 3072 -241 844 56 112 0 chr2 40894418 40894543 -212362040 + MER85 DNA T2_type 1 139 0 292 290 131 9 chr2 40895167 40895232 -212361351 - MIR SINE MIR -50 212 156 8042 57 4 5 chr2 40895232 40896202 -212360381 + LTR5 LTR ERVK 1 969 0 292 290 131 9 chr2 40896202 40896293 -212360290 - MIR SINE MIR -106 156 40 237 132 0 0 chr2 40896662 40896700 -212359883 + (TG)n Simple_repeat Simple_repeat 2 39 0 222 128 0 0 chr2 40896691 40896730 -212359853 + (TA)n Simple_repeat Simple_repeat 1 39 0 * 2260 123 0 0 chr2 40896732 40897040 -212359543 - AluSx SINE Alu 0 312 5 1115 167 35 0 chr2 40897521 40897719 -212358864 + Tigger6 DNA MER2_type 2 206 -877 1565 137 72 75 chr2 40897730 40898117 -212358466 + Tigger6 DNA MER2_type 1212 1597 0 2227 114 7 0 chr2 40898202 40898509 -212358074 + AluSg SINE Alu 1 309 -1 779 142 0 39 chr2 40899059 40899186 -212357397 - FLAM_C SINE Alu -16 127 6 222 150 0 0 chr2 40899518 40899558 -212357025 + (CATA)n Simple_repeat Simple_repeat 4 43 0 1140 89 5 47 chr2 40900543 40900733 -212355850 + THE1C-int LTR MaLR 1399 1580 0 1502 148 81 32 chr2 40900733 40901043 -212355540 + THE1C LTR MaLR 1 325 -50 185 271 86 43 chr2 40901251 40901321 -212355262 + L2 LINE L2 1841 1913 -1401 2073 145 0 0 chr2 40902123 40902433 -212354150 + AluJb SINE Alu 1 310 -2 698 222 60 37 chr2 40902540 40902756 -212353827 + L1ME1 LINE L1 5893 6113 -53 225 321 166 41 chr2 40903618 40903908 -212352675 + HAL1 LINE L1 309 634 -1873 274 330 10 0 chr2 40903913 40904016 -212352567 + HAL1 LINE L1 780 883 -1624 1200 253 194 30 chr2 40904077 40904717 -212351866 + HAL1 LINE L1 1178 1922 -585 225 335 96 54 chr2 40905449 40905616 -212350967 - L2 LINE L2 -424 2890 2717 24 32 0 0 chr2 40907706 40907737 -212348846 + AT_rich Low_complexity Low_complexity 1 31 0 351 0 0 0 chr2 40908036 40908075 -212348508 + (TG)n Simple_repeat Simple_repeat 2 40 0 892 316 105 29 chr2 40908797 40909475 -212347108 - L2 LINE L2 -25 3288 2557 2295 103 3 3 chr2 40910264 40910576 -212346007 + AluSx SINE Alu 1 312 0 466 116 0 0 chr2 40910776 40910845 -212345738 + L1MB7 LINE L1 6108 6176 -8 1997 148 10 10 chr2 40911827 40912137 -212344446 - AluJo SINE Alu -2 310 1 469 225 0 0 chr2 40912157 40912246 -212344337 + L2 LINE L2 3225 3313 0 1456 182 70 52 chr2 40912733 40913063 -212343520 + MLT1A1 LTR MaLR 22 357 -8 606 315 97 17 chr2 40913388 40913737 -212342846 + L1MEd LINE L1 3 379 -5740 388 242 55 0 chr2 40913897 40914025 -212342558 + L1MEd LINE L1 602 736 -5383 500 274 135 17 chr2 40914803 40915165 -212341418 + L1MEd LINE L1 851 1255 -4864 451 276 29 38 chr2 40915191 40915401 -212341182 + HAL1 LINE L1 1417 1624 -883 2282 96 3 0 chr2 40915451 40915744 -212340839 + AluSg SINE Alu 1 294 -16 1929 131 33 0 chr2 40916183 40916504 -212340079 - AluSx SINE Alu 0 330 1 194 329 49 12 chr2 40917021 40917103 -212339480 + L2 LINE L2 3227 3311 -2 297 337 0 11 chr2 40918217 40918309 -212338274 + L2 LINE L2 3180 3270 -2 1385 186 14 101 chr2 40918338 40918704 -212337879 + MER58B DNA MER1_type 3 336 -5 199 375 142 21 chr2 40918751 40918991 -212337592 - L2 LINE L2 -173 3099 2831 243 329 47 0 chr2 40919021 40919106 -212337477 - L3 LINE CR1 -406 1171 1083 1213 173 6 138 chr2 40919166 40919507 -212337076 + AluJo SINE Alu 2 297 -5 2542 61 0 10 chr2 40919712 40920023 -212336560 + AluY SINE Alu 1 308 -3 248 153 68 0 chr2 40920113 40920172 -212336411 + Charlie1 DNA MER1_type 2625 2687 -74 544 323 57 30 chr2 40920231 40920494 -212336089 - L3 LINE CR1 -510 1067 798 1153 187 29 29 chr2 40921049 40921290 -212335293 + Charlie1 DNA MER1_type 2 242 -2519 736 118 0 56 chr2 40921273 40921417 -212335166 + Charlie1 DNA MER1_type 2622 2757 -4 * 206 225 127 0 chr2 40921556 40921627 -212334956 + MIR SINE MIR 180 259 -3 216 213 0 62 chr2 40921671 40921751 -212334832 + (CTTAA)n Simple_repeat Simple_repeat 1 75 0 27 29 0 0 chr2 40921795 40921829 -212334754 + AT_rich Low_complexity Low_complexity 1 34 0 326 346 90 48 chr2 40921832 40922020 -212334563 - L3 LINE CR1 -1197 380 185 21 0 0 0 chr2 40922998 40923019 -212333564 + AT_rich Low_complexity Low_complexity 1 21 0 311 263 74 11 chr2 40923587 40923682 -212332901 - MER103 DNA DNA -6 160 60 371 371 6 6 chr2 40923695 40923862 -212332721 + GA-rich Low_complexity Low_complexity 2 168 0 1058 201 23 27 chr2 40924039 40924258 -212332325 + MER20 DNA MER1_type 2 219 0 886 144 40 45 chr2 40924316 40924538 -212332045 + L1MD3 LINE L1 7765 7985 -10 228 276 31 87 chr2 40924715 40924842 -212331741 + L2 LINE L2 2586 2705 -609 917 158 120 5 chr2 40925068 40925252 -212331331 - MER2 DNA MER2_type -139 206 2 230 286 63 40 chr2 40925461 40925587 -212330996 + L2 LINE L2 3093 3221 -92 2106 122 0 7 chr2 40925757 40926045 -212330538 - AluSx SINE Alu -26 286 1 1720 119 4 4 chr2 40926129 40926381 -212330202 + AluSg SINE Alu 45 296 -14 305 311 72 44 chr2 40927152 40927332 -212329251 + MIR3 SINE MIR 18 202 -6 21 0 0 0 chr2 40927501 40927522 -212329061 + AT_rich Low_complexity Low_complexity 1 21 0 366 156 0 0 chr2 40927799 40927863 -212328720 + (CAG)n Simple_repeat Simple_repeat 2 65 0 788 291 81 0 chr2 40927863 40928086 -212328497 - MIR SINE MIR -10 252 12 1303 105 0 28 chr2 40928184 40928236 -212328347 + AluSc SINE Alu 82 134 -175 2266 74 3 3 chr2 40928236 40928542 -212328041 + AluY SINE Alu 1 306 0 1303 105 0 28 chr2 40928542 40928669 -212327914 + AluSc SINE Alu 134 257 -52 499 106 0 0 chr2 40928669 40928767 -212327816 + AluSg/x SINE Alu 213 310 0 1662 154 57 34 chr2 40929037 40929157 -212327426 + AluJb SINE Alu 1 117 -195 2033 116 10 3 chr2 40929157 40929458 -212327125 + AluSc SINE Alu 1 303 -6 1662 154 57 34 chr2 40929458 40929635 -212326948 + AluJb SINE Alu 117 305 -7 1108 203 48 12 chr2 40930600 40930851 -212325732 + MIR SINE MIR 3 262 0 301 249 11 34 chr2 40932158 40932282 -212324301 + MLT1L LTR MaLR 474 609 0 190 314 231 0 chr2 40932321 40932442 -212324141 + L2 LINE L2 3165 3313 0 883 101 14 22 chr2 40932871 40933009 -212323574 - THE1C LTR MaLR -238 137 1 10257 94 31 61 chr2 40933009 40934638 -212321945 - THE1C-int LTR MaLR 0 1580 1 2390 116 22 11 chr2 40934638 40935009 -212321574 - THE1C LTR MaLR 0 375 1 347 336 30 38 chr2 40935107 40935238 -212321345 + MIR SINE MIR 7 136 -126 56 61 0 0 chr2 40935730 40935828 -212320755 + AT_rich Low_complexity Low_complexity 1 98 0 4323 190 68 28 chr2 40936323 40937460 -212319123 + L1MB1 LINE L1 4150 5331 -815 2123 135 0 3 chr2 40937460 40937764 -212318819 + AluSx SINE Alu 1 303 -9 430 209 59 40 chr2 40937769 40937905 -212318678 + L1MA9 LINE L1 6178 6307 -5 1921 141 38 35 chr2 40937920 40938289 -212318294 + L1MB1 LINE L1 5324 5693 -475 839 226 20 0 chr2 40938289 40938487 -212318096 + L1MB1 LINE L1 5958 6160 -8 1059 123 82 6 chr2 40938489 40938660 -212317923 - MER4E LTR ERV1 -2 777 594 2134 124 7 0 chr2 40938660 40938959 -212317624 + AluSx SINE Alu 1 301 -11 3150 123 54 20 chr2 40938959 40939495 -212317088 - MER4D LTR ERV1 -348 555 2 2917 3 0 0 chr2 40939505 40939818 -212316765 - AluYb8 SINE Alu -5 313 1 2729 115 36 83 chr2 40940112 40940761 -212315822 - MER4B LTR ERV1 0 779 1 1679 203 7 0 chr2 40941334 40941644 -212314939 + AluJb SINE Alu 1 312 0 439 212 177 0 chr2 40941699 40941812 -212314771 + FLAM_A SINE Alu 1 133 0 423 105 76 114 chr2 40941844 40941949 -212314634 - MER106B DNA MER1_type -57 1002 902 1885 157 3 10 chr2 40942459 40942765 -212313818 + AluJo SINE Alu 1 304 -8 1229 123 0 0 chr2 40943268 40943438 -212313145 - AluSx SINE Alu -10 302 133 595 75 0 0 chr2 40943441 40943521 -212313062 - AluSx SINE Alu -233 80 1 259 351 80 21 chr2 40943573 40943761 -212312822 + L2 LINE L2 2837 3035 -237 1979 208 57 5 chr2 40945129 40945552 -212311031 - LTR65 LTR ERV1 0 669 225 429 222 30 20 chr2 40945552 40945651 -212310932 + Tigger4(Zombi) DNA MER2_type 1 100 -2631 869 198 46 5 chr2 40945654 40945871 -212310712 + L1MA3 LINE L1 2178 2403 -3743 238 245 0 61 chr2 40945887 40945985 -212310598 - L1MC4 LINE L1 -1339 6703 6612 23 0 0 0 chr2 40945986 40946009 -212310574 + AT_rich Low_complexity Low_complexity 1 23 0 6568 132 17 19 chr2 40946011 40948186 -212308397 + L1MA3 LINE L1 4138 6305 0 1722 134 82 0 chr2 40948186 40948454 -212308129 + AluSx SINE Alu 13 302 -10 37 18 0 18 chr2 40948454 40948474 -212308109 + AT_rich Low_complexity Low_complexity 1 20 -34 2185 101 0 7 chr2 40948474 40948770 -212307813 + AluSx SINE Alu 1 294 -18 37 18 0 18 chr2 40948770 40948804 -212307779 + AT_rich Low_complexity Low_complexity 20 54 0 1531 189 25 0 chr2 40949054 40949329 -212307254 + AluJo SINE Alu 1 282 -30 413 232 93 57 chr2 40949409 40949603 -212306980 + L1MC5 LINE L1 7305 7505 -456 2003 197 150 21 chr2 40949682 40950262 -212306321 - L1MB8 LINE L1 -3 6175 5521 321 278 68 21 chr2 40950283 40950500 -212306083 + L1ME4a LINE L1 5979 6093 -28 221 304 0 25 chr2 40950617 40950696 -212305887 - L2 LINE L2 -16 3256 3180 186 250 50 0 chr2 40950768 40950808 -212305775 - L2 LINE L2 -200 3072 3031 319 224 9 122 chr2 40951209 40951316 -212305267 + MER58C DNA MER1_type 121 215 0 372 276 63 31 chr2 40951699 40951826 -212304757 - MIR3 SINE MIR -76 132 2 21 0 0 0 chr2 40952283 40952304 -212304279 + AT_rich Low_complexity Low_complexity 1 21 0 1180 230 15 23 chr2 40952396 40952657 -212303926 - MIR SINE MIR -2 260 2 290 237 32 0 chr2 40952899 40952992 -212303591 + (TA)n Simple_repeat Simple_repeat 1 96 0 1907 176 52 8 chr2 40954880 40954992 -212301591 - L1MB7 LINE L1 -8 6176 6065 960 221 138 32 chr2 40954992 40955363 -212301220 - L1MC4 LINE L1 -1986 6056 5647 * 1522 165 77 32 chr2 40955352 40955783 -212300800 - L1MB8 LINE L1 -775 5371 4922 347 290 55 52 chr2 40956458 40956653 -212299930 + MIR3 SINE MIR 14 203 -5 185 324 69 39 chr2 40956777 40956879 -212299704 - MER5A DNA MER1_type -83 106 2 220 333 42 0 chr2 40956793 40956865 -212299718 + MER5B DNA MER1_type 100 174 -4 2235 147 22 0 chr2 40957215 40957582 -212299001 - THE1C LTR MaLR 0 375 1 242 122 0 24 chr2 40957861 40957902 -212298681 + MER58A DNA MER1_type 45 84 -23 1765 153 3 31 chr2 40957909 40958203 -212298380 + AluJo SINE Alu 13 298 -14 535 188 31 0 chr2 40958205 40958301 -212298282 + MER58A DNA MER1_type 126 224 0 2265 118 0 0 chr2 40958338 40958651 -212297932 + AluSq SINE Alu 1 313 0 774 181 0 0 chr2 40958653 40958786 -212297797 + MER3 DNA MER1_type 1 133 -76 3081 200 96 43 chr2 40958851 40959626 -212296957 - L1ME1 LINE L1 -24 6142 5409 386 20 20 0 chr2 40959626 40959677 -212296906 + (TA)n Simple_repeat Simple_repeat 2 53 0 3081 200 96 43 chr2 40959677 40959706 -212296877 - L1ME1 LINE L1 -757 5409 5383 2310 103 0 7 chr2 40959706 40960006 -212296577 - AluSq SINE Alu -15 298 1 3081 200 96 43 chr2 40960006 40960068 -212296515 - L1ME1 LINE L1 -783 5383 5326 2081 186 3 13 chr2 40960068 40960460 -212296123 + MLT1B LTR MaLR 3 390 0 3081 200 96 43 chr2 40960460 40960880 -212295703 - L1ME1 LINE L1 -840 5326 4930 2037 142 6 10 chr2 40960880 40961191 -212295392 - AluSx SINE Alu -2 310 1 3081 200 96 43 chr2 40961191 40961521 -212295062 - L1ME1 LINE L1 -1236 4930 4439 282 197 66 0 chr2 40961523 40961584 -212294999 + MER3 DNA MER1_type 144 208 -1 247 293 0 0 chr2 40961540 40961598 -212294985 - MER3 DNA MER1_type -117 92 35 * 22 0 0 0 chr2 40961957 40961979 -212294604 + AT_rich Low_complexity Low_complexity 1 22 0 1155 263 120 63 chr2 40962344 40963952 -212292631 + L1MEd LINE L1 6 1580 -4551 291 252 111 83 chr2 40964166 40964379 -212292204 + MER20B DNA MER1_type 1 214 -5 328 316 25 32 chr2 40964446 40964604 -212291979 - MER5A DNA MER1_type -30 159 3 24 0 0 0 chr2 40964838 40964862 -212291721 + AT_rich Low_complexity Low_complexity 1 24 0 2494 63 0 13 chr2 40965148 40965463 -212291120 + AluY SINE Alu 1 311 0 474 268 14 7 chr2 40965464 40965602 -212290981 - MER103 DNA DNA -24 142 4 426 235 12 0 chr2 40965669 40965754 -212290829 + L2 LINE L2 3185 3270 -2 596 213 102 35 chr2 40965761 40965958 -212290625 + MER63A DNA MER1_type 1 210 0 2355 82 0 13 chr2 40965975 40966280 -212290303 + AluSc SINE Alu 1 301 -8 1924 203 53 0 chr2 40966687 40967061 -212289522 + MSTD LTR MaLR 3 396 0 33 0 0 0 chr2 40967590 40967623 -212288960 + AT_rich Low_complexity Low_complexity 1 33 0 557 58 0 0 chr2 40967623 40967692 -212288891 - U6 snRNA snRNA -37 70 2 1045 215 75 26 chr2 40967785 40968013 -212288570 + MER8 DNA MER2_type 1 239 0 210 375 25 17 chr2 40968366 40968486 -212288097 - L2 LINE L2 -653 2661 2541 318 106 0 0 chr2 40969387 40969434 -212287149 + (CA)n Simple_repeat Simple_repeat 2 48 0 1806 169 7 13 chr2 40970106 40970413 -212286170 - AluJo SINE Alu -7 305 1 2386 61 24 0 chr2 40970553 40970847 -212285736 - AluY SINE Alu -10 301 1 323 321 90 17 chr2 40971353 40971876 -212284707 + L1MC4a LINE L1 4280 4840 -1306 * 1056 221 122 61 chr2 40971871 40972492 -212284091 + L1MC4a LINE L1 5268 5926 -1882 28 29 0 0 chr2 40972660 40972695 -212283888 + AT_rich Low_complexity Low_complexity 1 35 0 384 88 0 0 chr2 40972779 40972836 -212283747 + (TAA)n Simple_repeat Simple_repeat 2 58 0 2062 128 13 13 chr2 40972837 40973142 -212283441 + AluSx SINE Alu 1 305 -7 230 299 103 21 chr2 40974295 40974392 -212282191 + L2 LINE L2 2552 2656 -658 375 320 133 22 chr2 40974496 40974858 -212281725 - L1 LINE L1 -2867 3279 2878 2512 277 97 20 chr2 40975064 40975592 -212280991 + L1MEc LINE L1 162 648 -5748 1548 187 3 10 chr2 40975592 40975892 -212280691 + AluJb SINE Alu 1 298 -14 2512 277 97 20 chr2 40975892 40976538 -212280045 + L1MEc LINE L1 648 1426 -4970 1251 211 70 103 chr2 40976549 40977247 -212279336 + L1MEc LINE L1 3024 3698 -2517 * 18220 136 43 27 chr2 40977246 40978684 -212277899 + L1M1 LINE L1 12 1426 -6139 2339 103 3 0 chr2 40978684 40978995 -212277588 - AluSp SINE Alu -1 312 1 18220 136 43 27 chr2 40978995 40979661 -212276922 + L1M1 LINE L1 1426 2080 -5485 1811 172 3 13 chr2 40979661 40979969 -212276614 + AluJb SINE Alu 1 305 -7 18220 136 43 27 chr2 40979969 40980957 -212275626 + L1M1 LINE L1 2080 3154 -4411 1266 241 104 11 chr2 40980944 40981413 -212275170 + L1MEc LINE L1 3668 4180 -2035 * 10315 118 44 41 chr2 40981413 40981625 -212274958 + Tigger2 DNA MER2_type 965 1175 -1543 1634 188 0 40 chr2 40981625 40981949 -212274634 - AluJb SINE Alu 0 312 2 10315 118 44 41 chr2 40981949 40983484 -212273099 + Tigger2 DNA MER2_type 1175 2717 -1 602 192 0 0 chr2 40983522 40983621 -212272962 + FLAM_A SINE Alu 1 99 -43 213 364 15 0 chr2 40985519 40985585 -212270998 - L2 LINE L2 -5 3267 3201 455 303 8 8 chr2 40986414 40986546 -212270037 - L2 LINE L2 -15 3298 3167 521 312 98 30 chr2 40986751 40986985 -212269598 - MIR SINE MIR 0 262 13 186 309 48 48 chr2 40987342 40987426 -212269157 - MIR SINE MIR -73 135 52 2132 102 0 7 chr2 40988668 40988963 -212267620 + AluY SINE Alu 1 293 -18 2407 97 0 3 chr2 40989744 40990055 -212266528 + AluSx SINE Alu 1 310 -2 225 0 0 0 chr2 40990055 40990080 -212266503 + (TA)n Simple_repeat Simple_repeat 2 26 0 284 125 0 0 chr2 40990182 40990230 -212266353 + L1MB8 LINE L1 6130 6177 -1 815 258 57 16 chr2 40990889 40991137 -212265446 + MIR SINE MIR 2 259 -3 3015 205 127 92 chr2 40991219 40991282 -212265301 + L1MC3 LINE L1 6397 6456 -1329 2377 84 3 0 chr2 40991282 40991592 -212264991 - AluY SINE Alu 0 311 1 3015 205 127 92 chr2 40991592 40991995 -212264588 + L1MC3 LINE L1 6456 6843 -942 2150 119 0 10 chr2 40991995 40992297 -212264286 + AluSc SINE Alu 1 299 -10 3015 205 127 92 chr2 40992297 40992521 -212264062 + L1MC3 LINE L1 6843 7058 -727 355 237 32 21 chr2 40992521 40992614 -212263969 + MLT1B LTR MaLR 37 130 -437 3015 205 127 92 chr2 40992614 40993171 -212263412 + L1MC3 LINE L1 7058 7785 0 22 35 0 0 chr2 40993390 40993419 -212263164 + AT_rich Low_complexity Low_complexity 1 29 0 1873 156 20 7 chr2 40994485 40994787 -212261796 - AluJo SINE Alu -6 306 1 851 206 22 119 chr2 40995338 40995452 -212261131 + MIR SINE MIR 1 125 -137 786 173 0 0 chr2 40995452 40995585 -212260998 - FLAM_C SINE Alu 0 133 1 851 206 22 119 chr2 40995585 40995747 -212260836 + MIR SINE MIR 125 250 -12 1074 164 15 0 chr2 40996468 40996663 -212259920 + MLT1B LTR MaLR 193 390 0 5352 200 84 73 chr2 40996663 40998025 -212258558 + L1MC4 LINE L1 4817 6162 -1880 2520 58 0 0 chr2 40998025 40998318 -212258265 - AluSx SINE Alu -19 293 1 5352 200 84 73 chr2 40998318 40998622 -212257961 + L1MC4 LINE L1 6162 6461 -1581 1982 153 0 3 chr2 40998622 40998929 -212257654 + AluJo SINE Alu 1 306 -6 5352 200 84 73 chr2 40998929 40999462 -212257121 + L1MC4 LINE L1 6461 6987 -1055 1324 207 102 12 chr2 40999462 40999805 -212256778 + MLT1A2 LTR MaLR 1 374 0 5352 200 84 73 chr2 40999805 41000786 -212255797 + L1MC4 LINE L1 6987 8031 -11 288 259 103 62 chr2 41000943 41001333 -212255250 + L1MCa LINE L1 1454 1916 -871 2183 80 7 30 chr2 41002467 41002767 -212253816 + AluSq SINE Alu 1 293 -20 2442 73 10 0 chr2 41002862 41003164 -212253419 + AluSg SINE Alu 1 305 -5 478 234 39 0 chr2 41003369 41003497 -212253086 + L1ME2 LINE L1 4464 4596 -1550 590 199 90 32 chr2 41003510 41003744 -212252839 + L1MD3 LINE L1 6115 7985 -10 1144 217 29 0 chr2 41003748 41004025 -212252558 + L1ME2 LINE L1 4599 4883 -1263 310 240 90 40 chr2 41004028 41004128 -212252455 + L1ME2 LINE L1 5911 6015 -149 921 67 0 0 chr2 41004128 41004248 -212252335 - THE1B LTR MaLR 0 364 245 24 0 0 0 chr2 41004592 41004616 -212251967 + AT_rich Low_complexity Low_complexity 1 24 0 660 215 140 27 chr2 41005044 41005230 -212251353 - L2 LINE L2 0 3313 3107 303 233 0 0 chr2 41005239 41005299 -212251284 + MER69 DNA AcHobo 8 67 -1159 568 172 97 0 chr2 41005440 41005574 -212251009 + MER69 DNA AcHobo 2380 2526 0 434 254 71 46 chr2 41005591 41005788 -212250795 - L2 LINE L2 -225 3088 2887 609 149 119 37 chr2 41005884 41006018 -212250565 - MIR SINE MIR -115 147 3 193 242 32 0 chr2 41006489 41006551 -212250032 - L3b LINE CR1 -200 1383 1320 415 202 22 0 chr2 41007081 41007170 -212249413 + MER103 DNA DNA 7 97 -69 195 191 115 0 chr2 41008025 41008073 -212248510 - MIR SINE MIR -89 119 66 762 236 192 0 chr2 41008735 41008943 -212247640 + MIR SINE MIR 15 262 0 425 313 215 24 chr2 41009211 41009860 -212246723 + L2 LINE L2 2544 3305 -8 189 74 0 0 chr2 41011188 41011215 -212245368 + (CCG)n Simple_repeat Simple_repeat 3 29 0 30 0 0 0 chr2 41011256 41011286 -212245297 + GC_rich Low_complexity Low_complexity 1 30 0 25 0 0 0 chr2 41012764 41012789 -212243794 + AT_rich Low_complexity Low_complexity 1 25 0 2252 109 0 3 chr2 41013112 41013416 -212243167 - AluSp SINE Alu -10 303 1 457 311 101 0 chr2 41013860 41014008 -212242575 - L3 LINE CR1 -23 1554 1392 740 243 150 0 chr2 41014039 41014265 -212242318 - MIR SINE MIR 0 262 3 217 313 0 73 chr2 41014323 41014419 -212242164 - L2 LINE L2 -31 3241 3153 2391 81 3 3 chr2 41014491 41014798 -212241785 + AluSx SINE Alu 1 307 -5 28 0 0 0 chr2 41015340 41015368 -212241215 + AT_rich Low_complexity Low_complexity 1 28 0 2133 112 0 14 chr2 41015368 41015663 -212240920 + AluSx SINE Alu 1 291 -21 579 152 0 18 chr2 41015686 41015798 -212240785 - L1MA9 LINE L1 -5 6307 6198 294 279 76 0 chr2 41015948 41016027 -212240556 + MIR SINE MIR 23 107 -155 207 136 45 23 chr2 41016072 41016116 -212240467 + MIR SINE MIR 218 262 0 2390 90 10 0 chr2 41016136 41016446 -212240137 - AluSp SINE Alu 0 313 1 214 395 120 8 chr2 41016519 41016901 -212239682 - L2 LINE L2 -663 2651 2227 2390 124 22 8 chr2 41016925 41017295 -212239288 + THE1C LTR MaLR 1 375 0 1765 191 3 7 chr2 41017507 41017800 -212238783 - AluJb SINE Alu -20 292 1 229 238 159 24 chr2 41017993 41018119 -212238464 - MER20B DNA MER1_type -604 179 37 284 324 9 19 chr2 41018396 41018501 -212238082 - L2 LINE L2 -191 3081 2978 530 334 0 76 chr2 41018541 41018843 -212237740 - L2 LINE L2 -455 2859 2581 496 290 99 36 chr2 41019111 41019476 -212237107 + LTR16B LTR ERVL 53 440 -24 232 308 92 8 chr2 41019503 41019623 -212236960 - L2 LINE L2 -1298 2016 1887 449 297 126 19 chr2 41019648 41019917 -212236666 - L3 LINE CR1 -331 1246 949 4142 112 28 121 chr2 41020391 41020838 -212235745 + Tigger3(Golem) DNA MER2_type 3 490 -2539 755 167 0 0 chr2 41020838 41020958 -212235625 + FLAM_C SINE Alu 3 122 -11 4142 112 28 121 chr2 41020958 41021162 -212235421 + Tigger3(Golem) DNA MER2_type 490 712 -2317 470 250 0 0 chr2 41021162 41021250 -212235333 + FLAM_A SINE Alu 2 89 -53 4142 112 28 121 chr2 41021250 41021355 -212235228 + Tigger3(Golem) DNA MER2_type 712 825 -2204 1842 171 0 10 chr2 41021355 41021648 -212234935 + AluJo SINE Alu 12 301 -11 4142 112 28 121 chr2 41021648 41022134 -212234449 + Tigger3(Golem) DNA MER2_type 825 3029 0 2379 89 3 0 chr2 41022665 41022968 -212233615 + AluSg SINE Alu 1 304 -6 2302 82 0 3 chr2 41022975 41023281 -212233302 + AluY SINE Alu 1 305 -6 2094 48 45 4 chr2 41023290 41023589 -212232994 + AluY SINE Alu 1 310 0 2039 103 45 3 chr2 41023765 41024057 -212232526 - AluSc SINE Alu -5 304 1 2205 115 0 3 chr2 41024149 41024444 -212232139 - AluSq SINE Alu -19 294 1 2327 97 3 0 chr2 41025739 41026023 -212230560 + AluSx SINE Alu 1 288 -24 207 0 0 0 chr2 41026023 41026046 -212230537 + (CAAT)n Simple_repeat Simple_repeat 2 24 0 2327 97 3 0 chr2 41026046 41026061 -212230522 + AluSx SINE Alu 288 301 -11 252 312 73 9 chr2 41026268 41026377 -212230206 - MIR SINE MIR -46 216 101 255 268 37 49 chr2 41026415 41026497 -212230086 - L2 LINE L2 -16 3256 3176 609 174 97 21 chr2 41026699 41026843 -212229740 + FRAM SINE Alu 11 165 -11 535 327 50 13 chr2 41026878 41027257 -212229326 + L1ME3A LINE L1 5558 5950 -220 1849 150 3 55 chr2 41027701 41028028 -212228555 - AluJo SINE Alu 0 312 1 226 217 98 76 chr2 41028162 41028254 -212228329 + L2 LINE L2 3179 3272 -41 2285 71 0 10 chr2 41028535 41028830 -212227753 + AluY SINE Alu 3 294 -17 561 250 8 92 chr2 41030331 41030477 -212226106 + L1ME1 LINE L1 2028 2144 -4252 2337 82 3 10 chr2 41030477 41030780 -212225803 + AluSp SINE Alu 1 301 -12 561 250 8 92 chr2 41030780 41030893 -212225690 + L1ME1 LINE L1 2144 2265 -4131 30 0 0 0 chr2 41030893 41030923 -212225660 + AT_rich Low_complexity Low_complexity 1 30 0 1937 270 94 20 chr2 41030923 41031863 -212224720 + L1ME1 LINE L1 2212 3266 -2949 1513 203 17 7 chr2 41031863 41032153 -212224430 + AluJb SINE Alu 1 293 -19 1937 270 94 20 chr2 41032153 41032444 -212224139 + L1ME1 LINE L1 3266 3534 -2681 3393 206 51 27 chr2 41032476 41032543 -212224040 + L1ME1 LINE L1 5101 5165 -1070 333 0 0 0 chr2 41032543 41032580 -212224003 + (CA)n Simple_repeat Simple_repeat 2 38 0 3393 206 51 27 chr2 41032580 41032614 -212223969 + L1ME1 LINE L1 5165 5197 -1038 649 212 8 0 chr2 41032614 41032746 -212223837 + FLAM_C SINE Alu 1 133 0 3393 206 51 27 chr2 41032746 41033420 -212223163 + L1ME1 LINE L1 5197 5899 -336 2024 126 17 0 chr2 41033420 41033713 -212222870 + AluSq SINE Alu 1 298 -15 3393 206 51 27 chr2 41033713 41034053 -212222530 + L1ME1 LINE L1 5899 6230 -5 969 257 95 3 chr2 41034063 41034359 -212222224 + L1ME3A LINE L1 5317 5639 -531 1293 223 78 21 chr2 41034382 41034550 -212222033 + L1ME3A LINE L1 5756 5913 -257 2300 82 0 0 chr2 41034550 41034864 -212221719 + AluSc SINE Alu 1 314 0 1293 223 78 21 chr2 41034864 41035076 -212221507 + L1ME3A LINE L1 5913 6159 -11 307 352 50 32 chr2 41035360 41035579 -212221004 + L1ME4a LINE L1 5692 5914 -207 2063 124 44 0 chr2 41035930 41036228 -212220355 + AluSx SINE Alu 1 311 -1 335 236 112 75 chr2 41036282 41036443 -212220140 - MLT1K LTR MaLR -411 177 11 503 191 180 10 chr2 41036655 41036849 -212219734 + L1MB7 LINE L1 5953 6179 -5 456 224 8 96 chr2 41036858 41036961 -212219622 - MER81 DNA DNA 0 114 22 2434 92 7 0 chr2 41036961 41037267 -212219316 + AluSq SINE Alu 1 308 -5 456 224 8 96 chr2 41037267 41037288 -212219295 - MER81 DNA DNA -92 22 1 1215 221 121 7 chr2 41037288 41037587 -212218996 - MLT1F LTR MaLR -32 510 174 1121 184 61 54 chr2 41037686 41037980 -212218603 - AluJo SINE Alu -6 306 11 338 233 92 98 chr2 41037998 41038161 -212218422 - MLT1F LTR MaLR -380 162 1 2346 102 0 3 chr2 41038176 41038479 -212218104 - AluSx SINE Alu -10 302 1 494 284 204 4 chr2 41038555 41038830 -212217753 - L1ME LINE L1 -411 5710 5381 192 125 0 0 chr2 41038885 41038917 -212217666 + (TA)n Simple_repeat Simple_repeat 2 33 0 479 332 33 51 chr2 41039107 41039441 -212217142 - L2 LINE L2 -436 2878 2551 1223 270 42 15 chr2 41039642 41039975 -212216608 + LTR16A LTR ERVL 16 357 -93 263 212 15 15 chr2 41039977 41040043 -212216540 + CT-rich Low_complexity Low_complexity 4 69 0 532 172 0 11 chr2 41040077 41040164 -212216419 + LTR16A LTR ERVL 360 445 -5 232 327 187 23 chr2 41040403 41040660 -212215923 - L2 LINE L2 -778 2536 2238 258 256 79 67 chr2 41040723 41040929 -212215654 + HAL1 LINE L1 916 1129 -1378 2489 90 0 0 chr2 41040929 41041239 -212215344 + AluSx SINE Alu 1 310 -2 258 256 79 67 chr2 41041239 41041348 -212215235 + HAL1 LINE L1 1129 1235 -1272 436 328 57 57 chr2 41041454 41041908 -212214675 - L2 LINE L2 -1641 1673 1220 4373 89 5 16 chr2 41042254 41042814 -212213769 + MER41A LTR ERV1 1 554 0 339 239 64 28 chr2 41042828 41042937 -212213646 + L2 LINE L2 3200 3312 -1 537 30 0 0 chr2 41044518 41044585 -212211998 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 1021 288 119 23 chr2 41044691 41045450 -212211133 - L1MC4a LINE L1 -749 5397 5054 1072 237 60 8 chr2 41045498 41045764 -212210819 + L2 LINE L2 2581 2860 -454 223 179 0 0 chr2 41045763 41045802 -212210781 + MIR SINE MIR 217 255 -7 * 317 258 138 12 chr2 41045840 41046060 -212210523 + L1ME LINE L1 5475 5719 -447 500 290 30 84 chr2 41046150 41046447 -212210136 - L1MC4a LINE L1 -2197 3949 3669 334 48 26 12 chr2 41046459 41046509 -212210074 - MER41B LTR ERV1 -88 547 515 2287 97 0 31 chr2 41046509 41046828 -212209755 + AluSc SINE Alu 1 309 0 334 48 26 12 chr2 41046828 41046864 -212209719 - MER41B LTR ERV1 -120 515 481 308 280 79 90 chr2 41046867 41047072 -212209511 - L1MC4a LINE L1 -2409 3737 3531 2323 87 3 0 chr2 41047072 41047370 -212209213 + AluSp SINE Alu 1 299 -14 308 280 79 90 chr2 41047370 41047561 -212209022 - L1MC4a LINE L1 -2615 3531 3339 1978 116 0 51 chr2 41047561 41047884 -212208699 - AluSg SINE Alu 0 309 2 308 280 79 90 chr2 41047884 41047919 -212208664 - L1MC4a LINE L1 -2807 3339 3305 1996 145 0 7 chr2 41047919 41048222 -212208361 + AluJb SINE Alu 1 301 -11 308 280 79 90 chr2 41048222 41048349 -212208234 - L1MC4a LINE L1 -2841 3305 3178 1471 190 84 16 chr2 41048349 41048670 -212207913 + MER2 DNA MER2_type 1 343 -1 308 280 79 90 chr2 41048670 41048702 -212207881 - L1MC4a LINE L1 -2968 3178 3147 432 37 0 0 chr2 41048702 41048756 -212207827 + (TG)n Simple_repeat Simple_repeat 2 55 0 308 280 79 90 chr2 41048756 41048845 -212207738 - L1MC4a LINE L1 -2999 3147 3060 2194 126 0 3 chr2 41048887 41049189 -212207394 + AluSg SINE Alu 1 301 -9 2182 117 0 3 chr2 41049409 41049707 -212206876 + AluSq SINE Alu 1 297 -16 201 121 0 0 chr2 41049978 41050011 -212206572 + (TTCC)n Simple_repeat Simple_repeat 4 36 0 182 337 120 23 chr2 41050545 41050978 -212205605 + L2 LINE L2 1846 2320 -994 2080 128 0 0 chr2 41051044 41051325 -212205258 - AluSx SINE Alu -31 281 1 2797 147 21 7 chr2 41051869 41052291 -212204292 + MSTA LTR MaLR 1 428 0 194 317 0 0 chr2 41052897 41052957 -212203626 + L2 LINE L2 2992 3051 -221 267 190 122 21 chr2 41053926 41054022 -212202561 + MIR SINE MIR 32 148 -60 2319 87 10 3 chr2 41054326 41054637 -212201946 + AluSq SINE Alu 1 313 0 288 0 0 0 chr2 41054826 41054858 -212201725 + (TA)n Simple_repeat Simple_repeat 2 33 0 2122 102 10 3 chr2 41054858 41055152 -212201431 - AluSp SINE Alu -17 296 1 22 88 0 0 chr2 41055373 41055430 -212201153 + AT_rich Low_complexity Low_complexity 1 57 0 833 166 40 0 chr2 41055430 41055581 -212201002 - L1MA7 LINE L1 0 6291 6135 260 284 20 10 chr2 41055652 41055754 -212200829 + (TATATG)n Simple_repeat Simple_repeat 6 108 0 2038 91 33 4 chr2 41056243 41056549 -212200034 - AluSq SINE Alu 0 314 1 259 240 19 0 chr2 41056636 41056740 -212199843 + (TA)n Simple_repeat Simple_repeat 2 107 0 1762 175 10 13 chr2 41056756 41057059 -212199524 - AluJo SINE Alu -10 302 1 2161 161 17 61 chr2 41058186 41058596 -212197987 + MSTD LTR MaLR 3 394 -2 1996 103 78 7 chr2 41059691 41059973 -212196610 - AluSx SINE Alu -10 302 1 237 290 0 16 chr2 41060709 41060771 -212195812 + GA-rich Low_complexity Low_complexity 2 62 0 948 126 0 0 chr2 41060893 41061044 -212195539 + (TC)n Simple_repeat Simple_repeat 2 152 0 2267 93 0 0 chr2 41061046 41061326 -212195257 - AluSx SINE Alu -32 280 1 279 306 14 0 chr2 41062001 41062073 -212194510 + polypyrimidine Low_complexity Low_complexity 1 73 0 1298 165 169 8 chr2 41062252 41062518 -212194065 - 7SLRNA srpRNA srpRNA -11 309 1 1786 174 10 0 chr2 41062645 41062939 -212193644 - AluJb SINE Alu -15 297 1 2257 102 7 0 chr2 41062952 41063257 -212193326 - AluSx SINE Alu -5 307 1 427 262 153 16 chr2 41063284 41063467 -212193116 - L1M4 LINE L1 -351 5811 5604 2187 99 3 0 chr2 41063620 41063914 -212192669 - AluY SINE Alu -15 296 2 2200 128 0 0 chr2 41063953 41064251 -212192332 + AluSx SINE Alu 1 298 -14 2291 120 3 0 chr2 41064352 41064660 -212191923 + AluSx SINE Alu 1 309 -3 2254 115 0 0 chr2 41064944 41065239 -212191344 - AluSx SINE Alu -13 299 5 2224 78 24 7 chr2 41065301 41065594 -212190989 - AluY SINE Alu -11 300 3 278 253 0 24 chr2 41065899 41065982 -212190601 + MIR SINE MIR 182 262 0 490 131 48 0 chr2 41067336 41067420 -212189163 - L1MA9 LINE L1 0 6312 6225 204 250 0 0 chr2 41067422 41067470 -212189113 + (TA)n Simple_repeat Simple_repeat 2 49 0 260 136 169 0 chr2 41067472 41067531 -212189052 + L1MA9 LINE L1 6225 6293 -19 225 121 17 52 chr2 41067531 41067589 -212188994 + (TA)n Simple_repeat Simple_repeat 2 57 0 285 51 0 0 chr2 41067589 41067628 -212188955 - L1MA9 LINE L1 -119 6193 6155 194 146 0 24 chr2 41067628 41067669 -212188914 + (TTTC)n Simple_repeat Simple_repeat 3 42 0 2883 166 14 4 chr2 41067670 41068165 -212188418 - L1MA9 LINE L1 -148 6164 5665 2121 113 24 0 chr2 41068165 41068456 -212188127 - AluSx SINE Alu -14 298 1 2206 135 0 0 chr2 41068561 41068872 -212187711 + AluSx SINE Alu 2 312 0 338 273 35 43 chr2 41069393 41069553 -212187030 - MIR SINE MIR -46 162 13 1212 153 157 32 chr2 41069957 41070357 -212186226 - AluJo SINE Alu 0 433 3 715 140 9 9 chr2 41070650 41070764 -212185819 - FLAM_A SINE Alu -17 125 12 231 188 0 0 chr2 41070994 41071042 -212185541 + (TATATG)n Simple_repeat Simple_repeat 3 50 0 646 183 58 0 chr2 41071306 41071410 -212185173 - FLAM_A SINE Alu -32 110 1 7740 38 5 0 chr2 41071904 41072778 -212183805 + L1PA5 LINE L1 5271 6148 -6 368 227 0 0 chr2 41073190 41073265 -212183318 - MER63 DNA MER1_type -9 1051 977 329 279 47 0 chr2 41073267 41073353 -212183230 - MER63 DNA MER1_type -320 742 27 1105 206 52 28 chr2 41073486 41073734 -212182849 - MLT1D LTR MaLR 0 505 252 192 179 0 0 chr2 41073785 41073824 -212182759 + (TG)n Simple_repeat Simple_repeat 1 39 0 644 209 25 70 chr2 41073833 41074034 -212182549 - MLT1D LTR MaLR -313 192 1 1998 100 75 0 chr2 41074105 41074385 -212182198 - AluY SINE Alu -10 301 1 249 33 0 0 chr2 41075529 41075559 -212181024 + (TTCC)n Simple_repeat Simple_repeat 3 32 0 203 61 30 0 chr2 41075560 41075593 -212180990 + (TC)n Simple_repeat Simple_repeat 1 34 0 1193 172 0 0 chr2 41075603 41075772 -212180811 - FAM SINE Alu -5 170 2 261 75 0 0 chr2 41075775 41075815 -212180768 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 2302 123 0 0 chr2 41075815 41076125 -212180458 - AluSq SINE Alu -2 311 2 398 242 117 16 chr2 41076129 41076257 -212180326 + MIR SINE MIR 122 262 0 1953 179 28 11 chr2 41076274 41076632 -212179951 + MLT1A1 LTR MaLR 1 364 -1 478 288 107 19 chr2 41077286 41077491 -212179092 - MIR SINE MIR -39 223 1 1849 150 0 35 chr2 41077499 41077812 -212178771 - AluJb SINE Alu -10 302 1 273 57 0 0 chr2 41077939 41077974 -212178609 + (A)n Simple_repeat Simple_repeat 1 35 0 2190 128 3 3 chr2 41077976 41078281 -212178302 + AluSq SINE Alu 1 305 -8 479 220 193 27 chr2 41078289 41078439 -212178144 - MER96 DNA MER1_type 0 175 1 321 157 12 72 chr2 41078477 41078560 -212178023 - LTR41 LTR ERVL 0 773 696 282 210 48 0 chr2 41079651 41079713 -212176870 + MER5B DNA MER1_type 1 65 -113 681 165 15 38 chr2 41079738 41079871 -212176712 + FLAM_C SINE Alu 11 140 -3 2107 130 0 13 chr2 41079995 41080310 -212176273 + AluSx SINE Alu 1 311 -1 1097 196 126 0 chr2 41081026 41081225 -212175358 - MER58A DNA MER1_type 0 224 1 790 276 71 4 chr2 41081392 41081617 -212174966 - MIR SINE MIR -3 259 20 1889 209 139 20 chr2 41081796 41082256 -212174327 + LTR40a LTR ERVL 5 519 0 417 317 55 24 chr2 41082551 41082715 -212173868 + MER5A DNA MER1_type 2 170 -19 1104 206 25 0 chr2 41082820 41083024 -212173559 - MER3 DNA MER1_type 0 209 1 959 149 25 113 chr2 41083026 41083308 -212173275 + L1MC5 LINE L1 6796 7052 -909 377 312 32 38 chr2 41083425 41083582 -212173001 + LTR16C LTR ERVL 336 491 0 180 0 0 0 chr2 41084221 41084241 -212172342 + (CTGGGG)n Simple_repeat Simple_repeat 1 20 0 657 248 108 6 chr2 41084397 41084554 -212172029 + MER63A DNA MER1_type 5 177 -33 2447 85 3 3 chr2 41084855 41085162 -212171421 - AluSp SINE Alu -6 307 1 275 179 15 0 chr2 41088042 41088109 -212168474 + (TG)n Simple_repeat Simple_repeat 1 68 0 352 307 69 53 chr2 41088525 41088714 -212167869 + MIR SINE MIR 20 211 -51 197 260 82 55 chr2 41089009 41089082 -212167501 - MIR SINE MIR -87 121 47 266 268 24 12 chr2 41089149 41089231 -212167352 + MER5A DNA MER1_type 1 83 -106 2260 201 84 33 chr2 41092909 41093239 -212163344 + MER119 DNA MER1_type 8 379 -204 1844 87 4 0 chr2 41093239 41093468 -212163115 - AluSc SINE Alu -16 293 64 2260 201 84 33 chr2 41093468 41093685 -212162898 + MER119 DNA MER1_type 379 583 0 533 178 309 58 chr2 41093884 41093958 -212162625 - MER5C DNA MER1_type 0 324 270 2155 164 41 50 chr2 41093958 41094374 -212162209 + MLT2D LTR ERVL 3 414 0 533 178 309 58 chr2 41094374 41094558 -212162025 - MER5C DNA MER1_type -54 270 1 213 235 0 0 chr2 41094575 41094626 -212161957 + (TA)n Simple_repeat Simple_repeat 2 52 0 755 162 18 24 chr2 41094627 41094794 -212161789 - L1MD3 LINE L1 -14 7981 7816 2337 135 127 16 chr2 41094800 41095185 -212161398 - MSTA LTR MaLR 0 428 1 8133 151 89 30 chr2 41095185 41096661 -212159922 - MSTA-int LTR MaLR 0 1580 17 2186 144 152 8 chr2 41096666 41097040 -212159543 - MSTA LTR MaLR 0 428 1 297 300 83 25 chr2 41097569 41097689 -212158894 + L2 LINE L2 3146 3272 0 269 238 25 25 chr2 41099233 41099313 -212157270 + MIR SINE MIR 165 244 -18 1159 300 176 40 chr2 41100060 41100451 -212156132 + L2 LINE L2 1708 2045 -1227 2127 107 45 0 chr2 41100451 41100740 -212155843 - AluSx SINE Alu -10 302 1 1159 300 176 40 chr2 41100740 41101347 -212155236 + L2 LINE L2 2045 2568 -704 2506 70 0 0 chr2 41101347 41101647 -212154936 - AluY SINE Alu -11 300 1 1159 300 176 40 chr2 41101647 41102011 -212154572 + L2 LINE L2 2568 3271 -1 2408 81 0 0 chr2 41102121 41102418 -212154165 - AluY SINE Alu -14 297 1 241 406 0 9 chr2 41102631 41102737 -212153846 - L3 LINE CR1 -2 1575 1471 * 416 299 117 39 chr2 41102729 41102955 -212153628 - MIR SINE MIR -1 261 17 798 102 0 0 chr2 41102955 41103073 -212153510 + (CTATG)n Simple_repeat Simple_repeat 5 122 0 302 336 67 0 chr2 41103146 41103265 -212153318 - L3 LINE CR1 -211 1366 1240 276 116 116 29 chr2 41103290 41103359 -212153224 - L1ME4a LINE L1 -3 6118 6044 324 266 21 91 chr2 41103385 41103528 -212153055 - L3 LINE CR1 -578 999 867 1653 159 24 0 chr2 41103658 41103910 -212152673 - AluSx SINE Alu -54 258 1 630 350 138 35 chr2 41103918 41104484 -212152099 - L3 LINE CR1 -740 837 214 215 224 75 30 chr2 41105304 41105371 -212151212 + L2 LINE L2 3141 3210 -62 2199 152 8 37 chr2 41105523 41105744 -212150839 - MLT1A1 LTR MaLR 0 365 158 2383 85 0 7 chr2 41105744 41106049 -212150534 - AluSc SINE Alu -6 303 1 2199 152 8 37 chr2 41106049 41106203 -212150380 - MLT1A1 LTR MaLR -207 158 1 295 188 0 25 chr2 41106402 41106482 -212150101 + (CCCTAA)n Simple_repeat Simple_repeat 5 82 0 716 209 95 0 chr2 41107011 41107169 -212149414 - MER45A DNA AcHobo -5 173 1 295 248 80 80 chr2 41107174 41107311 -212149272 - MIR3 SINE MIR -69 139 3 933 193 74 72 chr2 41110145 41110218 -212146365 - L1MC5 LINE L1 -23 7938 7867 2230 96 0 3 chr2 41110218 41110509 -212146074 + AluSx SINE Alu 3 292 -20 933 193 74 72 chr2 41110509 41110866 -212145717 - L1MC5 LINE L1 -94 7867 7507 2554 155 39 45 chr2 41110873 41111384 -212145199 - L1MD3 LINE L1 0 7995 7488 2490 145 18 12 chr2 41111477 41111494 -212145089 - MER57A LTR ERV1 0 403 388 2095 133 10 0 chr2 41111494 41111803 -212144780 + AluSx SINE Alu 1 312 0 2490 145 18 12 chr2 41111803 41112186 -212144397 - MER57A LTR ERV1 -15 388 1 2194 131 0 0 chr2 41112504 41112809 -212143774 + AluSx SINE Alu 1 305 -7 1897 157 56 85 chr2 41112869 41113314 -212143269 - MSTB1 LTR MaLR 0 432 1 231 244 78 44 chr2 41113568 41113658 -212142925 - MIR SINE MIR -74 134 42 501 229 41 65 chr2 41116059 41116229 -212140354 + MIR3 SINE MIR 9 174 -34 465 268 56 114 chr2 41117352 41117658 -212138925 - MLT1I LTR MaLR -26 383 96 2890 143 11 72 chr2 41117854 41118203 -212138380 + L1MB7 LINE L1 5652 5956 -228 2221 119 0 13 chr2 41118203 41118513 -212138070 + AluSx SINE Alu 5 310 -2 2890 143 11 72 chr2 41118513 41118715 -212137868 + L1MB7 LINE L1 5956 6169 -15 1550 124 127 8 chr2 41119643 41119902 -212136681 - AluSg1 SINE Alu -13 296 7 371 153 0 0 chr2 41120883 41120942 -212135641 - L1MB2 LINE L1 -3 6168 6110 269 215 0 46 chr2 41121017 41121082 -212135501 + L2 LINE L2 3251 3312 -1 412 283 16 87 chr2 41121520 41121704 -212134879 + MER5B DNA MER1_type 8 178 0 786 239 6 0 chr2 41121781 41121944 -212134639 - MER5B DNA MER1_type 0 178 15 2292 173 64 25 chr2 41121964 41122404 -212134179 + LTR32 LTR ERVL 15 471 0 296 258 103 62 chr2 41122408 41122478 -212134105 + MER5A DNA MER1_type 58 135 -54 4247 139 30 16 chr2 41122478 41123168 -212133415 - L1MB2 LINE L1 -11 6160 5461 296 258 103 62 chr2 41123168 41123194 -212133389 + MER5A DNA MER1_type 135 158 -31 2257 122 0 3 chr2 41124165 41124476 -212132107 + AluJb SINE Alu 1 310 -2 240 269 21 21 chr2 41125740 41125833 -212130750 - MLT1J LTR MaLR -4 507 415 770 286 126 14 chr2 41125840 41126134 -212130449 - HERVL LTR ERVL -3005 2649 2323 6867 131 23 7 chr2 41126146 41128188 -212128395 - L1MA8 LINE L1 0 6291 4220 1835 313 103 26 chr2 41128188 41129320 -212127263 - HERVL LTR ERVL -3420 2344 1096 1553 113 26 22 chr2 41129568 41129671 -212126912 - MER30 DNA MER1_type 0 230 129 2217 107 0 19 chr2 41129671 41129981 -212126602 - AluSg SINE Alu -5 305 2 1553 113 26 22 chr2 41129981 41130106 -212126477 - MER30 DNA MER1_type -101 129 1 1464 164 125 21 chr2 41130459 41130739 -212125844 - AluJb SINE Alu -3 309 1 342 271 59 8 chr2 41131061 41131179 -212125404 - LTR67 LTR ERVL -3 554 431 414 328 30 52 chr2 41131276 41131508 -212125075 - LTR67 LTR ERVL -293 264 38 751 158 94 170 chr2 41131636 41131690 -212124893 - MLT2B1 LTR ERVL 0 520 464 2262 92 3 3 chr2 41131690 41131984 -212124599 + AluSp SINE Alu 1 294 -19 751 158 94 170 chr2 41131984 41131996 -212124587 - MLT2B1 LTR ERVL -56 464 453 192 40 0 0 chr2 41131996 41132021 -212124562 + (TA)n Simple_repeat Simple_repeat 2 26 0 751 158 94 170 chr2 41132021 41132456 -212124127 - MLT2B1 LTR ERVL -67 453 1 355 259 35 12 chr2 41133486 41133571 -212123012 + MIR SINE MIR 20 106 -156 4973 125 16 36 chr2 41133642 41133977 -212122606 - L1MA4A LINE L1 -1 6302 5962 2282 111 0 0 chr2 41133977 41134274 -212122309 - AluSx SINE Alu -15 297 1 4973 125 16 36 chr2 41134274 41134647 -212121936 - L1MA4A LINE L1 -341 5962 5611 1614 181 7 20 chr2 41134647 41134951 -212121632 - AluJo SINE Alu -12 300 1 4973 125 16 36 chr2 41134951 41135065 -212121518 - L1MA4A LINE L1 -692 5611 5496 8967 200 35 41 chr2 41135078 41135487 -212121096 - L1 LINE L1 -2616 4232 3822 2468 86 0 0 chr2 41135487 41135790 -212120793 - AluSx SINE Alu -9 303 1 8967 200 35 41 chr2 41135790 41136545 -212120038 - L1 LINE L1 -3026 3822 3065 1473 201 15 4 chr2 41136545 41136813 -212119770 - AluJb SINE Alu -39 273 3 8967 200 35 41 chr2 41136813 41138791 -212117792 - L1 LINE L1 -3783 3065 1103 180 0 0 0 chr2 41138791 41138811 -212117772 + (CTG)n Simple_repeat Simple_repeat 1 20 0 8967 200 35 41 chr2 41138811 41139068 -212117515 - L1 LINE L1 -5745 1103 846 415 282 75 17 chr2 41139144 41139318 -212117265 - LTR67 LTR ERVL -2 555 372 201 214 161 0 chr2 41141157 41141213 -212115370 + MIR SINE MIR 11 75 -187 243 88 0 0 chr2 41142062 41142096 -212114487 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 891 139 29 0 chr2 41142114 41142251 -212114332 - AluJo SINE Alu -171 141 1 1260 165 100 117 chr2 41143423 41143792 -212112791 + MLT1A1 LTR MaLR 1 363 -2 553 239 18 0 chr2 41143792 41143900 -212112683 - MER81 DNA DNA -1 113 3 282 338 92 14 chr2 41144017 41144159 -212112424 + MIR3 SINE MIR 17 169 -39 438 329 64 26 chr2 41144254 41144488 -212112095 - MIR SINE MIR -11 251 9 404 295 118 89 chr2 41145539 41145987 -212110596 + L2 LINE L2 2812 3272 0 180 237 0 0 chr2 41146005 41146043 -212110540 - L2 LINE L2 -10 3303 3266 2235 121 6 18 chr2 41146217 41146459 -212110124 - MER2 DNA MER2_type -10 335 97 4709 114 2 12 chr2 41146459 41147101 -212109482 - MER41B LTR ERV1 0 635 1 2235 121 6 18 chr2 41147101 41147197 -212109386 - MER2 DNA MER2_type -248 97 1 2255 96 0 10 chr2 41147751 41148042 -212108541 - AluSg SINE Alu -20 290 3 1630 184 0 54 chr2 41148049 41148364 -212108219 - AluJo SINE Alu -14 298 1 2217 113 3 10 chr2 41148475 41148786 -212107797 - AluSx SINE Alu -3 309 1 24 32 0 0 chr2 41148801 41148832 -212107751 + AT_rich Low_complexity Low_complexity 1 31 0 195 42 0 0 chr2 41149066 41149090 -212107493 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 43085 55 3 1 chr2 41149092 41155226 -212101357 - L1PA5 LINE L1 0 6154 11 2248 98 0 0 chr2 41155396 41155683 -212100900 + AluSc SINE Alu 1 287 -22 5512 136 38 24 chr2 41155706 41156697 -212099886 - L1MA4 LINE L1 -6 6294 5290 3180 159 5 10 chr2 41156704 41157284 -212099299 - L1 LINE L1 -775 5371 4795 244 352 37 37 chr2 41157348 41157456 -212099127 - MIR SINE MIR -62 146 39 629 321 87 0 chr2 41157784 41158002 -212098581 - MIR SINE MIR -20 242 6 712 121 0 0 chr2 41159165 41159256 -212097327 - AluSx SINE Alu -15 295 205 4198 135 98 92 chr2 41159257 41160636 -212095947 + pTR5 LTR ERV1 385 714 0 1319 106 106 0 chr2 41160636 41160825 -212095758 - AluSx SINE Alu -103 209 1 22 0 0 0 chr2 41160831 41160853 -212095730 + AT_rich Low_complexity Low_complexity 1 22 0 264 262 16 0 chr2 41160952 41161013 -212095570 + CT-rich Low_complexity Low_complexity 2 63 0 488 256 131 60 chr2 41161218 41161531 -212095052 - L1ME3A LINE L1 -264 5906 5575 2140 120 3 7 chr2 41162830 41163130 -212093453 - AluSx SINE Alu -13 299 1 1758 179 10 17 chr2 41163159 41163460 -212093123 + AluJb SINE Alu 1 299 -13 213 264 57 0 chr2 41163462 41163515 -212093068 - L3 LINE CR1 -8 1569 1514 267 241 0 0 chr2 41163515 41163569 -212093014 - MLT1H1 LTR MaLR 0 555 502 183 152 0 0 chr2 41163588 41163634 -212092949 + T-rich Low_complexity Low_complexity 1 46 0 3580 39 2 0 chr2 41163637 41164043 -212092540 - L1PA3 LINE L1 -3 6152 5746 597 198 114 28 chr2 41164176 41164416 -212092167 - MLT1H LTR MaLR -263 292 17 231 288 76 0 chr2 41165048 41165114 -212091469 + MER5A DNA MER1_type 119 189 0 1378 177 17 48 chr2 41165287 41165581 -212091002 - L1MB7 LINE L1 0 6184 5900 403 293 136 7 chr2 41166172 41166312 -212090271 - MIR3 SINE MIR -9 199 42 2244 120 7 0 chr2 41166540 41166848 -212089735 - AluSx SINE Alu -2 310 1 835 166 183 0 chr2 41166868 41167037 -212089546 - MER3 DNA MER1_type -4 205 6 508 281 91 41 chr2 41167046 41167267 -212089316 + MIR SINE MIR 29 260 -2 2236 116 6 3 chr2 41167303 41167614 -212088969 + AluSx SINE Alu 1 312 0 365 306 30 55 chr2 41168537 41168577 -212088006 + MIR3 SINE MIR 6 45 -163 1792 141 10 52 chr2 41168577 41168882 -212087701 - AluJo SINE Alu -20 292 1 365 306 30 55 chr2 41168882 41169040 -212087543 + MIR3 SINE MIR 45 199 -9 842 189 38 16 chr2 41169092 41169277 -212087306 + MER53 DNA DNA 1 189 0 411 318 64 92 chr2 41170446 41170617 -212085966 + L2 LINE L2 2817 2991 -281 2415 86 0 3 chr2 41170617 41170919 -212085664 - AluSp SINE Alu -12 301 1 411 318 64 92 chr2 41170919 41171215 -212085368 + L2 LINE L2 2991 3271 -1 571 253 69 17 chr2 41171812 41171986 -212084597 + MIR3 SINE MIR 20 202 -6 4905 202 51 95 chr2 41171998 41173065 -212083518 + MER69 DNA AcHobo 1 988 -1538 2190 133 0 0 chr2 41173065 41173374 -212083209 - AluSg SINE Alu -1 309 1 4905 202 51 95 chr2 41173374 41173763 -212082820 + MER69 DNA AcHobo 988 1393 -1133 1584 215 102 24 chr2 41173779 41174319 -212082264 + MER69 DNA AcHobo 1945 2526 0 453 196 399 0 chr2 41174333 41174466 -212082117 - MER5A DNA MER1_type 0 189 4 308 301 98 24 chr2 41174477 41174600 -212081983 - MER5A DNA MER1_type 0 189 58 421 228 0 0 chr2 41174610 41174689 -212081894 + L1ME LINE L1 5510 5588 -2220 284 191 85 64 chr2 41174704 41174798 -212081785 - LTR50 LTR ERVL -675 120 25 328 325 64 0 chr2 41174810 41174989 -212081594 + L1ME LINE L1 5600 5796 -325 2445 52 0 52 chr2 41175292 41175620 -212080963 + AluY SINE Alu 1 311 0 441 240 32 81 chr2 41175985 41176206 -212080377 - L1MC4 LINE L1 -2 8040 7831 3113 203 41 26 chr2 41176253 41176986 -212079597 - L1ME2 LINE L1 -10 6154 5411 23 0 0 0 chr2 41177007 41177030 -212079553 + AT_rich Low_complexity Low_complexity 1 23 0 3750 259 124 26 chr2 41177037 41178475 -212078108 - L1MC4 LINE L1 -3 8039 6460 688 268 32 5 chr2 41179608 41179798 -212076785 + MER117 DNA MER1_type 2 196 -1 338 281 62 25 chr2 41179982 41180142 -212076441 - MIR SINE MIR -6 256 91 397 284 71 30 chr2 41180196 41180365 -212076218 + MER5B DNA MER1_type 1 176 -2 270 357 136 14 chr2 41180388 41180601 -212075982 - MIR SINE MIR -4 258 20 294 311 25 33 chr2 41181099 41181221 -212075362 - L3 LINE CR1 -9 1568 1448 1981 93 0 19 chr2 41181223 41181491 -212075092 + AluSc SINE Alu 42 304 -5 539 231 37 0 chr2 41184181 41184289 -212072294 - MER81 DNA DNA -2 112 1 801 112 0 0 chr2 41184747 41184854 -212071729 - AluSg/x SINE Alu -13 297 191 1459 109 0 0 chr2 41234856 41235048 -212021535 - AluSq SINE Alu -117 196 5 1149 168 80 9 chr2 41235057 41235283 -212021300 - MER21B LTR ERV1 -227 636 395 690 302 15 0 chr2 41235552 41235757 -212020826 - MIR SINE MIR -10 252 45 1187 148 14 0 chr2 41236095 41236311 -212020272 - L1MD3 LINE L1 -10 7985 7767 1070 171 57 55 chr2 41236324 41236722 -212019861 - MLT1A1 LTR MaLR 0 365 11 3124 204 44 10 chr2 41236735 41237501 -212019082 - L1MC4a LINE L1 -227 7581 6790 4687 145 33 29 chr2 41237526 41238416 -212018167 - L1MC2 LINE L1 -8 6336 5444 339 342 0 33 chr2 41238639 41238791 -212017792 - HAL1b LINE L1 -653 695 549 323 138 0 15 chr2 41239201 41239266 -212017317 + (TAGA)n Simple_repeat Simple_repeat 1 64 0 311 306 44 19 chr2 41239276 41239436 -212017147 + MLT1K LTR MaLR 411 574 -14 611 79 10 40 chr2 41241208 41241309 -212015274 - Tigger5 DNA MER2_type -91 2232 2135 2272 145 65 31 chr2 41241311 41241726 -212014857 + Tigger2a DNA MER2_type 3 431 -3 399 220 57 105 chr2 41241742 41241951 -212014632 + MLT1K LTR MaLR 378 576 -12 403 312 0 14 chr2 41241986 41242124 -212014459 - HAL1b LINE L1 -864 484 349 327 332 164 48 chr2 41242790 41243040 -212013543 - L2 LINE L2 -21 3251 2973 2369 82 3 13 chr2 41243295 41243599 -212012984 - AluSg SINE Alu -9 301 1 220 392 0 0 chr2 41243846 41243948 -212012635 - MIR SINE MIR -72 190 89 458 289 119 34 chr2 41244652 41244887 -212011696 + MIR SINE MIR 2 256 -6 23 33 0 0 chr2 41245381 41245411 -212011172 + AT_rich Low_complexity Low_complexity 1 30 0 198 242 21 116 chr2 41246221 41246316 -212010267 - L3 LINE CR1 -5 1572 1487 234 330 44 0 chr2 41246574 41246665 -212009918 - MIR3 SINE MIR -48 160 66 411 56 0 0 chr2 41247016 41247070 -212009513 + (CA)n Simple_repeat Simple_repeat 2 55 0 1055 130 43 133 chr2 41248743 41249008 -212007575 + MER33 DNA MER1_type 26 258 -2327 2011 159 3 0 chr2 41249008 41249317 -212007266 + AluJb SINE Alu 1 310 -2 1055 130 43 133 chr2 41249317 41249374 -212007209 + MER33 DNA MER1_type 258 319 -5 262 224 0 35 chr2 41249804 41249862 -212006721 + G-rich Low_complexity Low_complexity 2 57 0 1621 148 35 12 chr2 41250692 41251024 -212005559 - MER61C LTR ERV1 0 434 3 436 267 113 13 chr2 41251112 41251262 -212005321 + MER5A DNA MER1_type 25 189 0 679 288 20 14 chr2 41251343 41251559 -212005024 - MIR SINE MIR -14 248 26 10137 27 0 196 chr2 41251601 41253325 -212003258 - SVA Other Other 0 1386 1 256 269 75 0 chr2 41253466 41253533 -212003050 - MIR SINE MIR -98 110 39 1746 107 7 22 chr2 41253646 41253916 -212002667 - L1MA9 LINE L1 0 6312 6047 383 291 69 11 chr2 41254479 41254654 -212001929 - L1MC/D LINE L1 -1984 5824 5640 1688 107 25 0 chr2 41254658 41254900 -212001683 - L1PA14 LINE L1 -2 6159 5912 788 142 17 0 chr2 41254901 41255021 -212001562 + L1PA14 LINE L1 5826 5947 -214 * 991 267 43 8 chr2 41255003 41255306 -212001277 - L1MC/D LINE L1 -468 5653 5338 242 254 0 0 chr2 41256048 41256103 -212000480 + MER5A DNA MER1_type 60 114 -75 279 321 74 6 chr2 41258148 41258307 -211998276 - MIR3 SINE MIR -68 140 4 2374 77 44 0 chr2 41258839 41259137 -211997446 + AluY SINE Alu 1 311 0 262 215 92 15 chr2 41259144 41259209 -211997374 + MIR SINE MIR 20 89 -173 195 129 0 0 chr2 41259267 41259298 -211997285 + (TAA)n Simple_repeat Simple_repeat 1 31 0 243 262 78 39 chr2 41259307 41259410 -211997173 - MIR SINE MIR -6 256 150 305 369 37 33 chr2 41259443 41259687 -211996896 - L2 LINE L2 0 3272 3028 284 170 0 0 chr2 41260782 41260829 -211995754 + MIR SINE MIR 92 138 -70 1797 162 26 20 chr2 41260859 41261030 -211995553 - AluJb SINE Alu -7 305 130 2370 85 0 0 chr2 41261030 41261324 -211995259 - AluSc SINE Alu -11 298 5 1797 162 26 20 chr2 41261324 41261455 -211995128 - AluJb SINE Alu -182 130 1 494 297 62 34 chr2 41261539 41261748 -211994835 + MIR SINE MIR 48 262 0 183 366 35 63 chr2 41261963 41262105 -211994478 - L2 LINE L2 -1 3271 3134 781 288 60 0 chr2 41262464 41262697 -211993886 - MIR SINE MIR -4 258 12 2394 98 0 0 chr2 41263692 41263998 -211992585 + AluSx SINE Alu 1 306 -6 3001 145 30 35 chr2 41264922 41265461 -211991122 - L1MA9 LINE L1 0 6312 5777 198 191 0 0 chr2 41265468 41265510 -211991073 + (TA)n Simple_repeat Simple_repeat 2 43 0 306 50 0 0 chr2 41265581 41265621 -211990962 + (CA)n Simple_repeat Simple_repeat 1 40 0 1914 140 11 0 chr2 41266951 41267257 -211989326 + AluJb SINE Alu 1 309 0 2389 83 114 15 chr2 41267302 41267743 -211988840 + MER1A DNA MER1_type 1 523 -6 297 313 70 0 chr2 41267746 41267874 -211988709 + L1MC4a LINE L1 5769 5905 -1903 2205 85 7 0 chr2 41267997 41268308 -211988275 - AluSq SINE Alu 0 313 1 7404 110 58 31 chr2 41268552 41269750 -211986833 - Tigger3b DNA MER2_type -1 1230 1 269 303 136 8 chr2 41269893 41270025 -211986558 - MIR SINE MIR -50 212 64 230 317 50 0 chr2 41270068 41270128 -211986455 + MIR SINE MIR 87 149 -59 2306 86 7 3 chr2 41270726 41271027 -211985556 - AluSx SINE Alu -10 302 1 2353 148 101 13 chr2 41271062 41271528 -211985055 - MER74A LTR ERVL -51 507 1 22 0 0 0 chr2 41271963 41271985 -211984598 + AT_rich Low_complexity Low_complexity 1 22 0 2148 139 0 0 chr2 41272121 41272424 -211984159 - AluSx SINE Alu -9 303 1 21 0 0 0 chr2 41272739 41272760 -211983823 + AT_rich Low_complexity Low_complexity 1 21 0 237 178 0 0 chr2 41273166 41273211 -211983372 + T-rich Low_complexity Low_complexity 1 45 0 1838 203 68 62 chr2 41273943 41274445 -211982138 - MLT1D LTR MaLR 0 505 1 279 192 41 0 chr2 41274715 41274788 -211981795 + A-rich Low_complexity Low_complexity 4 79 0 1910 96 3 21 chr2 41274882 41275164 -211981419 - L1PA8 LINE L1 -2 6170 5894 8035 25 0 2 chr2 41275766 41277103 -211979480 - L1PA4 LINE L1 -5 6150 4814 3729 235 85 21 chr2 41277135 41278248 -211978335 + L2 LINE L2 1420 2604 -710 897 238 11 75 chr2 41278262 41278527 -211978056 + MIR SINE MIR 11 258 -4 6741 100 14 0 chr2 41278996 41279704 -211976879 + L1PA8 LINE L1 4457 5153 -1019 2118 133 7 0 chr2 41279704 41280012 -211976571 + AluSg SINE Alu 1 310 0 6741 100 14 0 chr2 41280012 41281028 -211975555 + L1PA8 LINE L1 5153 6164 -8 22 0 0 0 chr2 41281028 41281050 -211975533 + AT_rich Low_complexity Low_complexity 1 22 0 444 286 101 50 chr2 41282862 41283100 -211973483 - MIR SINE MIR -12 250 1 1379 283 216 26 chr2 41283134 41283519 -211973064 + L2 LINE L2 2013 2324 -990 2341 108 3 0 chr2 41283519 41283835 -211972748 - L1PA14 LINE L1 0 6161 5845 1379 283 216 26 chr2 41283835 41284259 -211972324 + L2 LINE L2 2324 2976 -338 262 301 52 52 chr2 41285459 41285595 -211970988 + L2 LINE L2 3132 3267 -5 210 329 32 111 chr2 41287080 41287296 -211969287 + L2 LINE L2 2981 3179 -93 319 278 8 52 chr2 41289611 41289894 -211966689 + G-rich Low_complexity Low_complexity 1 270 0 205 264 42 30 chr2 41289812 41289979 -211966604 + (CGGG)n Simple_repeat Simple_repeat 3 171 0 * 21 71 0 0 chr2 41290006 41290048 -211966535 + GC_rich Low_complexity Low_complexity 1 42 0 318 305 125 62 chr2 41290051 41290490 -211966093 + L1M2 LINE L1 941 1407 -5442 255 313 0 57 chr2 41290604 41290780 -211965803 + CT-rich Low_complexity Low_complexity 4 169 0 358 311 91 8 chr2 41292247 41292379 -211964204 - L3 LINE CR1 -3 1574 1432 248 331 55 31 chr2 41292512 41292675 -211963908 + MIR3 SINE MIR 41 207 -1 331 281 104 0 chr2 41292819 41292915 -211963668 + MIR3 SINE MIR 69 174 -34 348 343 90 45 chr2 41293732 41293977 -211962606 - L3 LINE CR1 -945 632 377 189 107 0 0 chr2 41294372 41294400 -211962183 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 384 286 10 10 chr2 41294416 41294514 -211962069 - L2 LINE L2 -39 3274 3177 227 216 91 11 chr2 41295676 41295764 -211960819 - Charlie7 DNA MER1_type -48 2564 2470 1572 169 10 59 chr2 41296599 41296906 -211959677 - AluJo SINE Alu -11 301 10 2866 133 17 0 chr2 41298285 41298750 -211957833 + L1PB1 LINE L1 5678 6150 -1 21 0 0 0 chr2 41298750 41298771 -211957812 + AT_rich Low_complexity Low_complexity 1 21 0 1492 188 7 22 chr2 41299864 41300140 -211956443 - AluJo SINE Alu -18 294 23 318 267 0 11 chr2 41300274 41300364 -211956219 - MLT1L LTR MaLR -15 600 512 991 157 31 14 chr2 41300567 41300790 -211955793 - MLT1L LTR MaLR -348 267 41 263 279 0 13 chr2 41302038 41302117 -211954466 + GA-rich Low_complexity Low_complexity 3 80 0 2684 155 71 2 chr2 41302249 41302758 -211953825 + L1MB5 LINE L1 5585 6128 -46 354 376 43 8 chr2 41302857 41303091 -211953492 + L2 LINE L2 2814 3055 -217 520 329 12 6 chr2 41304153 41304323 -211952260 + MIR3 SINE MIR 36 206 -2 450 260 62 45 chr2 41306008 41306185 -211950398 + MIR3 SINE MIR 20 199 -9 240 235 121 54 chr2 41308359 41308525 -211948058 - L1ME4a LINE L1 0 6121 5945 319 277 108 51 chr2 41308665 41309024 -211947559 + L2 LINE L2 2671 3058 -214 237 346 57 66 chr2 41309071 41309406 -211947177 + L2 LINE L2 2642 2973 -341 247 211 0 18 chr2 41309548 41309605 -211946978 + L2 LINE L2 3184 3239 -74 477 0 0 0 chr2 41311042 41311095 -211945488 + (TG)n Simple_repeat Simple_repeat 2 54 0 739 235 146 3 chr2 41311935 41312168 -211944415 + MIR SINE MIR 1 261 -1 311 311 140 12 chr2 41312178 41312342 -211944241 + MIR SINE MIR 78 262 0 202 143 0 0 chr2 41313523 41313558 -211943025 + L2 LINE L2 3238 3272 0 927 138 22 11 chr2 41313609 41313790 -211942793 + L1MB3 LINE L1 5956 6138 -45 4322 249 89 17 chr2 41313795 41315520 -211941063 + L1M3c LINE L1 2 1850 -4361 1729 158 3 46 chr2 41315521 41315887 -211940696 + L1MA9 LINE L1 5454 5803 -509 319 125 0 0 chr2 41315894 41315950 -211940633 - L1M1 LINE L1 -514 5788 5733 186 103 0 0 chr2 41316011 41316040 -211940543 + (TA)n Simple_repeat Simple_repeat 1 29 0 2521 127 26 45 chr2 41316040 41316530 -211940053 + L1MA9 LINE L1 5794 6274 -38 355 103 0 0 chr2 41316530 41316587 -211939996 + L1MB2 LINE L1 6114 6171 0 610 275 41 12 chr2 41316737 41316908 -211939675 - MIR SINE MIR -7 255 80 934 122 0 0 chr2 41317083 41317222 -211939361 + AluY SINE Alu 173 311 0 267 103 0 0 chr2 41318226 41318265 -211938318 + (TAA)n Simple_repeat Simple_repeat 2 40 0 508 225 172 13 chr2 41318285 41318436 -211938147 - MIR SINE MIR -57 205 31 639 173 6 32 chr2 41318675 41318831 -211937752 + MER33 DNA MER1_type 27 178 -146 274 243 43 0 chr2 41318860 41318930 -211937653 + MER33 DNA MER1_type 291 363 0 29 60 0 0 chr2 41319985 41320035 -211936548 + AT_rich Low_complexity Low_complexity 1 50 0 710 243 133 13 chr2 41320497 41320723 -211935860 - MIR SINE MIR -8 254 2 300 189 47 104 chr2 41322348 41322454 -211934129 + MIR SINE MIR 89 188 -74 4074 211 79 31 chr2 41322454 41323105 -211933478 - L1 LINE L1 -2211 4433 3815 1843 166 0 3 chr2 41323105 41323389 -211933194 - AluSx SINE Alu -13 299 17 4074 211 79 31 chr2 41323389 41323538 -211933045 - L1 LINE L1 -2829 3815 3675 1931 149 7 3 chr2 41323538 41323833 -211932750 - AluJo SINE Alu -15 297 2 4074 211 79 31 chr2 41323833 41326539 -211930044 - L1 LINE L1 -2969 3675 684 24 0 0 0 chr2 41326801 41326825 -211929758 + AT_rich Low_complexity Low_complexity 1 24 0 657 276 17 11 chr2 41326853 41327034 -211929549 + MER5A DNA MER1_type 2 183 -6 254 0 26 0 chr2 41330722 41330760 -211925823 - L1PB2 LINE L1 -7 6144 6106 2285 98 20 0 chr2 41331543 41331840 -211924743 - AluSx SINE Alu -5 307 5 494 249 333 4 chr2 41332024 41332488 -211924095 - L2 LINE L2 0 3313 2717 2733 16 3 0 chr2 41332488 41332795 -211923788 - AluY SINE Alu -3 308 1 257 279 15 0 chr2 41334530 41334598 -211921985 + GA-rich Low_complexity Low_complexity 5 73 0 185 247 65 86 chr2 41334874 41334967 -211921616 + L2 LINE L2 1130 1220 -2094 23 68 0 0 chr2 41335363 41335407 -211921176 + AT_rich Low_complexity Low_complexity 1 44 0 1119 237 32 16 chr2 41335804 41336116 -211920467 - MER46C DNA MER2_type 0 338 22 333 0 0 0 chr2 41336120 41336157 -211920426 + (TG)n Simple_repeat Simple_repeat 2 38 0 198 0 0 0 chr2 41336741 41336763 -211919820 + (TC)n Simple_repeat Simple_repeat 2 23 0 214 354 0 15 chr2 41337288 41337353 -211919230 + L2 LINE L2 3244 3307 -6 2056 136 71 8 chr2 41337462 41337829 -211918754 + MLT1B LTR MaLR 1 390 0 459 317 56 22 chr2 41339021 41339201 -211917382 - MIR3 SINE MIR 0 208 23 313 282 35 0 chr2 41340859 41340944 -211915639 + L2 LINE L2 3185 3272 0 250 236 0 18 chr2 41342267 41342322 -211914261 + CT-rich Low_complexity Low_complexity 1 54 0 581 223 51 40 chr2 41342399 41342574 -211914009 + MER5B DNA MER1_type 1 177 -1 391 231 149 0 chr2 41342624 41342745 -211913838 - MIR SINE MIR -12 250 112 485 209 45 18 chr2 41343980 41344090 -211912493 - L2 LINE L2 -10 3303 3191 236 348 176 10 chr2 41344499 41344801 -211911782 + L2 LINE L2 2921 3272 0 528 312 108 50 chr2 41345601 41345790 -211910793 - L2 LINE L2 -410 2904 2727 1622 155 59 33 chr2 41345790 41346094 -211910489 + AluJo SINE Alu 1 312 0 528 312 108 50 chr2 41346094 41346340 -211910243 - L2 LINE L2 -587 2727 2444 204 97 0 0 chr2 41347489 41347520 -211909063 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 261 275 29 14 chr2 41347757 41347826 -211908757 - MIR SINE MIR -105 157 88 531 259 117 125 chr2 41350024 41350649 -211905934 - L2 LINE L2 -1 3312 2708 192 179 0 0 chr2 41351383 41351422 -211905161 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 5864 54 9 0 chr2 41351645 41352382 -211904201 - L1PA6 LINE L1 0 6154 5411 797 293 123 23 chr2 41353107 41353537 -211903046 - LTR67 LTR ERVL -9 548 76 292 375 40 10 chr2 41353844 41354044 -211902539 + LTR16C LTR ERVL 193 398 -93 382 309 24 18 chr2 41354134 41354299 -211902284 - ERVL LTR ERVL -696 5068 4903 889 311 111 19 chr2 41354822 41355337 -211901246 - ERVL LTR ERVL -787 4867 4306 1342 191 85 59 chr2 41355355 41355779 -211900804 - MSTB2 LTR MaLR 0 457 23 1532 281 116 36 chr2 41355788 41356909 -211899674 - ERVL LTR ERVL -1383 4271 3061 427 294 94 21 chr2 41356975 41357210 -211899373 - ERVL LTR ERVL -3381 2383 2132 488 216 0 20 chr2 41357211 41357313 -211899270 + L2 LINE L2 1399 1498 -1816 3832 247 61 78 chr2 41357904 41359303 -211897280 + L2 LINE L2 1485 2859 -455 518 200 0 43 chr2 41359307 41359422 -211897161 - MER20 DNA MER1_type -105 114 5 526 315 14 18 chr2 41359720 41359942 -211896641 - LTR67 LTR ERVL -8 549 329 386 236 22 0 chr2 41359983 41360072 -211896511 - LTR67 LTR ERVL -434 123 33 515 302 159 3 chr2 41361985 41362356 -211894227 - L2 LINE L2 -922 2392 1964 1843 154 7 7 chr2 41362360 41362652 -211893931 + AluJb SINE Alu 1 292 -20 475 137 40 0 chr2 41362667 41362791 -211893792 + (TA)n Simple_repeat Simple_repeat 1 129 0 659 295 180 20 chr2 41363131 41363727 -211892856 + L2 LINE L2 2596 3285 -28 436 163 35 39 chr2 41363936 41364051 -211892532 + L1MC/D LINE L1 5548 5660 -461 413 281 43 7 chr2 41364091 41364230 -211892353 - MIR SINE MIR -4 258 115 235 245 95 28 chr2 41364271 41364468 -211892115 + L1MC/D LINE L1 5686 5894 -227 204 97 0 0 chr2 41364684 41364715 -211891868 + (TTTTC)n Simple_repeat Simple_repeat 4 34 0 1515 204 41 20 chr2 41364794 41365088 -211891495 - AluJo SINE Alu -10 302 3 181 304 0 0 chr2 41365375 41365421 -211891162 + L2 LINE L2 2867 2912 -401 493 291 209 0 chr2 41366036 41366242 -211890341 - MIR SINE MIR -10 252 4 563 293 0 46 chr2 41366770 41366944 -211889639 + MER5B DNA MER1_type 3 168 -10 2745 125 19 21 chr2 41367525 41367958 -211888625 + MSTB1 LTR MaLR 1 432 0 289 262 71 0 chr2 41368014 41368098 -211888485 + MIR SINE MIR 56 145 -117 819 229 157 0 chr2 41369973 41370183 -211886400 + MIR SINE MIR 14 256 -6 403 125 0 0 chr2 41370380 41370436 -211886147 + MER5A DNA MER1_type 1 56 -133 278 241 51 13 chr2 41370438 41370517 -211886066 - MER5A DNA MER1_type -12 177 96 681 281 110 6 chr2 41370941 41371269 -211885314 - HAL1b LINE L1 -525 823 462 1218 198 176 10 chr2 41371743 41372259 -211884324 + MER114 LTR ERV 47 648 0 2236 81 46 0 chr2 41372499 41372782 -211883801 + AluSc SINE Alu 1 296 -13 1517 163 57 50 chr2 41372784 41373085 -211883498 + AluJo SINE Alu 1 303 -9 5387 119 28 0 chr2 41373677 41374540 -211882043 - L1PA11 LINE L1 0 6174 5285 1845 134 8 0 chr2 41374540 41374802 -211881781 + AluSx SINE Alu 38 301 -11 1918 134 23 33 chr2 41375760 41376066 -211880517 - AluSx SINE Alu -9 303 1 511 275 101 50 chr2 41376266 41376484 -211880099 - MIR SINE MIR -27 235 7 21 36 0 0 chr2 41376876 41376904 -211879679 + AT_rich Low_complexity Low_complexity 1 28 0 2008 247 226 37 chr2 41376995 41377996 -211878587 + L2 LINE L2 1522 2711 -603 342 155 17 0 chr2 41378849 41378907 -211877676 - MER81 DNA DNA -1 113 55 898 266 200 0 chr2 41380147 41380452 -211876131 - L2 LINE L2 -1563 1751 1386 885 56 0 0 chr2 41380459 41380567 -211876016 + AluY SINE Alu 190 297 -14 499 226 133 15 chr2 41380569 41380764 -211875819 - L2 LINE L2 -2257 1057 840 270 0 0 0 chr2 41380988 41381018 -211875565 + (TAA)n Simple_repeat Simple_repeat 1 30 0 854 233 287 15 chr2 41381041 41381445 -211875138 - L2 LINE L2 -2461 853 340 24 0 0 0 chr2 41382252 41382276 -211874307 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr2 41383062 41383086 -211873497 + AT_rich Low_complexity Low_complexity 1 24 0 418 333 14 0 chr2 41383112 41383259 -211873324 + HAL1 LINE L1 1112 1260 -1247 36 40 0 0 chr2 41383336 41383386 -211873197 + AT_rich Low_complexity Low_complexity 1 50 0 618 302 56 14 chr2 41383434 41383649 -211872934 - MIR SINE MIR 0 262 39 420 287 18 30 chr2 41383699 41383948 -211872635 + HAL1b LINE L1 335 1602 -765 384 312 40 8 chr2 41387289 41387414 -211869169 + L2 LINE L2 2229 2357 -957 248 324 20 20 chr2 41387468 41387570 -211869013 + L2 LINE L2 2211 2312 -1002 224 337 186 12 chr2 41387771 41387943 -211868640 + L2 LINE L2 2691 2892 -422 254 339 82 29 chr2 41388000 41388171 -211868412 + L2 LINE L2 2837 3016 -256 517 286 161 14 chr2 41388301 41388518 -211868065 - MIR SINE MIR -13 249 1 28 107 0 0 chr2 41389053 41389165 -211867418 + AT_rich Low_complexity Low_complexity 1 112 0 2173 125 0 0 chr2 41389241 41389536 -211867047 - AluSg SINE Alu -15 295 1 36 53 0 0 chr2 41389584 41389641 -211866942 + AT_rich Low_complexity Low_complexity 1 57 0 2807 3 0 0 chr2 41391401 41391704 -211864879 + AluYa5 SINE Alu 1 303 -8 2035 109 4 0 chr2 41393498 41393764 -211862819 + AluSx SINE Alu 1 267 -45 294 356 11 23 chr2 41395806 41395983 -211860600 - MIR SINE MIR 0 262 88 305 149 35 0 chr2 41397608 41397722 -211858861 + (TA)n Simple_repeat Simple_repeat 2 119 0 3157 144 40 62 chr2 41397978 41398596 -211857987 + MER6A DNA MER2_type 1 605 0 1504 211 14 11 chr2 41399076 41399355 -211857228 + AluJb SINE Alu 1 280 -32 2164 90 47 17 chr2 41399566 41399865 -211856718 + AluSx SINE Alu 1 308 -4 489 93 9 75 chr2 41400354 41400461 -211856122 + L1MC5 LINE L1 7300 7399 -562 2310 95 10 0 chr2 41400473 41400769 -211855814 - AluSx SINE Alu -13 299 1 287 286 20 41 chr2 41400938 41401036 -211855547 + MER5A DNA MER1_type 92 187 -2 461 348 82 10 chr2 41401207 41401414 -211855169 - MIR SINE MIR -17 245 24 268 265 129 30 chr2 41401533 41401665 -211854918 + MIR SINE MIR 117 261 -1 321 313 40 27 chr2 41401817 41401967 -211854616 - L3b LINE CR1 -174 1409 1258 825 250 42 24 chr2 41402107 41402319 -211854264 + MIR SINE MIR 46 261 -1 234 273 0 39 chr2 41402728 41402805 -211853778 - MIR SINE MIR -44 218 145 444 123 0 0 chr2 41403415 41403488 -211853095 + (GGGAGA)n Simple_repeat Simple_repeat 1 73 0 472 201 157 30 chr2 41403577 41403711 -211852872 - MIR3 SINE MIR -14 194 44 222 200 0 0 chr2 41404220 41404265 -211852318 + C-rich Low_complexity Low_complexity 4 48 0 1962 117 0 0 chr2 41404362 41404643 -211851940 - AluJb SINE Alu -11 301 21 189 353 103 9 chr2 41404850 41404966 -211851617 - L2 LINE L2 -1 3312 3186 210 349 110 7 chr2 41406441 41406587 -211849996 + L2 LINE L2 2898 3058 -214 2017 119 154 5 chr2 41406907 41407277 -211849306 - MSTA LTR MaLR -2 426 2 504 48 0 0 chr2 41407630 41407693 -211848890 + (CA)n Simple_repeat Simple_repeat 1 63 0 261 233 17 0 chr2 41407700 41407760 -211848823 + LTR67 LTR ERVL 497 557 0 24 53 0 0 chr2 41409330 41409368 -211847215 + AT_rich Low_complexity Low_complexity 1 38 0 1920 119 11 0 chr2 41410534 41410795 -211845788 + AluSx SINE Alu 29 292 -20 6037 144 43 52 chr2 41411286 41412186 -211844397 + Tigger3b DNA MER2_type 2 889 -2139 221 57 29 0 chr2 41412186 41412221 -211844362 + (CTCA)n Simple_repeat Simple_repeat 3 38 0 6037 144 43 52 chr2 41412221 41412561 -211844022 + Tigger3b DNA MER2_type 889 1231 0 21 71 0 0 chr2 41412874 41412916 -211843667 + AT_rich Low_complexity Low_complexity 1 42 0 2394 90 3 0 chr2 41412916 41413217 -211843366 - AluSp SINE Alu -11 302 1 284 222 80 108 chr2 41413243 41413419 -211843164 + L3b LINE CR1 1115 1285 -298 921 130 35 75 chr2 41413772 41413819 -211842764 - L1MB2 LINE L1 0 6171 6124 2155 111 7 7 chr2 41413819 41414117 -211842466 - AluSq SINE Alu -15 298 1 921 130 35 75 chr2 41414117 41414187 -211842396 - L1MB2 LINE L1 -47 6124 6053 5481 154 20 34 chr2 41414187 41415273 -211841310 - MER11C LTR ERVK 0 1071 1 921 130 35 75 chr2 41415273 41415354 -211841229 - L1MB2 LINE L1 -118 6053 5980 223 261 174 0 chr2 41415420 41415489 -211841094 + L2 LINE L2 3230 3310 -3 658 205 25 0 chr2 41415530 41415652 -211840931 - LTR12 LTR ERV1 -228 486 362 255 194 0 42 chr2 41415652 41415724 -211840859 - LTR30 LTR ERV1 -98 624 556 303 139 89 13 chr2 41415724 41415803 -211840780 - LTR12 LTR ERV1 -425 289 205 1200 130 88 5 chr2 41415842 41416058 -211840525 - LTR12 LTR ERV1 -480 234 1 474 256 26 0 chr2 41416206 41416323 -211840260 - MER5B DNA MER1_type -19 159 40 227 278 117 39 chr2 41416400 41416580 -211840003 + MLT1L LTR MaLR 198 391 -224 183 80 0 0 chr2 41416593 41416618 -211839965 + (A)n Simple_repeat Simple_repeat 1 25 0 425 240 67 101 chr2 41417074 41417282 -211839301 - L2 LINE L2 0 3313 3113 217 311 33 0 chr2 41417730 41417791 -211838792 - L2 LINE L2 -50 3263 3201 2698 96 64 10 chr2 41419581 41419987 -211836596 - MSTA LTR MaLR 0 428 1 1538 104 26 4 chr2 41420271 41420711 -211835872 + LTR54 LTR ERV1 1 510 0 631 299 4 58 chr2 41421254 41421515 -211835068 - MIR SINE MIR -13 249 3 7323 48 0 0 chr2 41421663 41422705 -211833878 - L1PA6 LINE L1 -2 6152 5111 829 228 39 0 chr2 41422951 41423131 -211833452 - MER58A DNA MER1_type 0 224 38 1192 172 112 4 chr2 41423187 41423419 -211833164 + MER1B DNA MER1_type 1 257 -82 462 198 170 0 chr2 41423419 41423525 -211833058 + MIR SINE MIR 22 145 -117 450 278 69 60 chr2 41423769 41424205 -211832378 - HAL1 LINE L1 -838 1669 1230 232 308 145 31 chr2 41425527 41425686 -211830897 + L3b LINE CR1 1388 1564 -19 2126 153 71 5 chr2 41426245 41426638 -211829945 - MSTB LTR MaLR 0 426 8 425 164 15 0 chr2 41426741 41426808 -211829775 - Alu SINE Alu -26 284 217 749 273 110 57 chr2 41426920 41426964 -211829619 - L1MDa LINE L1 -4136 2174 2134 1711 139 17 28 chr2 41426964 41427252 -211829331 + AluSx SINE Alu 1 285 -27 201 74 0 0 chr2 41427252 41427279 -211829304 + (AAATG)n Simple_repeat Simple_repeat 4 30 0 749 273 110 57 chr2 41427279 41428460 -211828123 - L1MDa LINE L1 -4176 2134 844 10585 204 24 11 chr2 41428460 41431753 -211824830 - L1PA15 LINE L1 -3 6813 3460 749 273 110 57 chr2 41431753 41431772 -211824811 - L1MDa LINE L1 -5466 844 827 28906 113 11 55 chr2 41431787 41438210 -211818373 - L1PA7 LINE L1 -11 6143 13 3799 239 43 29 chr2 41438223 41439142 -211817441 - L1PA15 LINE L1 -3325 3472 2568 2235 130 0 13 chr2 41439142 41439458 -211817125 + AluSx SINE Alu 1 312 0 3799 239 43 29 chr2 41439458 41439552 -211817031 - L1PA15 LINE L1 -4229 2568 2477 2876 102 18 27 chr2 41439552 41439991 -211816592 + L1PA11 LINE L1 5739 6173 -1 3799 239 43 29 chr2 41439991 41441229 -211815354 - L1PA15 LINE L1 -4320 2477 1185 400 367 45 45 chr2 41441328 41441704 -211814879 - L1MDa LINE L1 -5295 824 449 496 321 141 12 chr2 41442361 41442688 -211813895 - L2 LINE L2 -1348 1966 1598 1691 200 25 28 chr2 41442818 41443173 -211813410 - MLT1A1 LTR MaLR 0 365 12 2240 112 0 0 chr2 41443768 41444064 -211812519 + AluSq SINE Alu 1 296 -17 387 0 0 0 chr2 41444076 41444119 -211812464 + (TA)n Simple_repeat Simple_repeat 2 44 0 808 250 126 32 chr2 41444432 41444589 -211811994 + HsTC2 DNA Tc2 1161 1302 -596 1009 202 0 6 chr2 41444589 41444762 -211811821 - FAM SINE Alu -3 172 1 808 250 126 32 chr2 41444762 41444984 -211811599 + HsTC2 DNA Tc2 1302 1752 -146 668 242 102 9 chr2 41445049 41445264 -211811319 - L1MC/D LINE L1 -1992 5816 5582 909 266 31 12 chr2 41446905 41447077 -211809506 + MIR SINE MIR 2 182 -80 1358 198 39 94 chr2 41447077 41447461 -211809122 - MLT1A1 LTR MaLR -2 363 1 909 266 31 12 chr2 41447461 41447544 -211809039 + MIR SINE MIR 182 262 0 269 271 28 21 chr2 41447615 41447759 -211808824 + GA-rich Low_complexity Low_complexity 3 147 0 5426 125 37 13 chr2 41448078 41449058 -211807525 - L1MA8 LINE L1 -6 6285 5290 28645 118 11 56 chr2 41449071 41455507 -211801076 - L1PA7 LINE L1 -4 6150 13 12854 187 27 15 chr2 41455517 41458524 -211798059 - L1M1 LINE L1 -813 6752 3710 7938 229 34 12 chr2 41458520 41461183 -211795400 - L1 LINE L1 -1779 5069 2347 * 3333 205 78 14 chr2 41461201 41461213 -211795370 - L1PBb LINE L1 -4706 2142 2132 2185 140 0 13 chr2 41461213 41461527 -211795056 - AluSx SINE Alu -2 310 1 3333 205 78 14 chr2 41461527 41462409 -211794174 - L1PBb LINE L1 -4716 2132 1098 492 281 42 35 chr2 41462671 41462931 -211793652 - L1PBb LINE L1 -5792 1057 796 310 342 0 0 chr2 41462936 41463015 -211793568 - L1PBb LINE L1 -6353 496 418 * 417 282 21 70 chr2 41462999 41463141 -211793442 - L1 LINE L1 -6018 831 697 276 30 0 0 chr2 41463856 41463889 -211792694 + (TG)n Simple_repeat Simple_repeat 1 33 0 782 304 18 11 chr2 41463890 41464170 -211792413 - L1PBb LINE L1 -6558 291 10 906 218 75 77 chr2 41464179 41464660 -211791923 - L1M1 LINE L1 -3956 3609 3130 731 298 99 66 chr2 41464802 41465182 -211791401 - L1ME2 LINE L1 -283 5881 5472 2454 62 0 3 chr2 41465182 41465486 -211791097 - AluY SINE Alu -8 303 1 731 298 99 66 chr2 41465486 41465709 -211790874 - L1ME2 LINE L1 -692 5472 5258 385 195 0 35 chr2 41466028 41466141 -211790442 + (TA)n Simple_repeat Simple_repeat 1 109 0 1890 132 33 36 chr2 41466141 41466445 -211790138 - AluJb SINE Alu -8 304 2 198 0 0 0 chr2 41466645 41466667 -211789916 + (GA)n Simple_repeat Simple_repeat 2 23 0 322 225 14 14 chr2 41467679 41467750 -211788833 + L2 LINE L2 3239 3309 -4 297 0 0 0 chr2 41467957 41467990 -211788593 + (TA)n Simple_repeat Simple_repeat 1 33 0 189 0 0 0 chr2 41467990 41468011 -211788572 + (T)n Simple_repeat Simple_repeat 1 21 0 30 27 0 0 chr2 41468244 41468281 -211788302 + AT_rich Low_complexity Low_complexity 1 37 0 2070 159 43 66 chr2 41468539 41469056 -211787527 - MLT1D LTR MaLR 0 505 1 2075 118 70 17 chr2 41469120 41469476 -211787107 + THE1C LTR MaLR 1 375 0 303 113 0 0 chr2 41470019 41470072 -211786511 + (TG)n Simple_repeat Simple_repeat 2 54 0 183 156 0 0 chr2 41470892 41470924 -211785659 + T-rich Low_complexity Low_complexity 2 33 0 383 260 169 32 chr2 41471817 41471971 -211784612 - MER5A DNA MER1_type -6 183 9 2419 73 0 3 chr2 41472323 41472648 -211783935 - AluSg SINE Alu 0 334 11 279 232 162 10 chr2 41473244 41473343 -211783240 - L2 LINE L2 -8 3305 3192 202 283 0 0 chr2 41473756 41473809 -211782774 + L2 LINE L2 2313 2365 -949 427 111 0 0 chr2 41473816 41473888 -211782695 - L1MB2 LINE L1 -211 5960 5889 27 49 0 0 chr2 41473935 41473976 -211782607 + AT_rich Low_complexity Low_complexity 1 41 0 1531 189 7 46 chr2 41474010 41474316 -211782267 - AluJb SINE Alu -12 300 7 385 307 146 28 chr2 41474359 41474571 -211782012 - L2 LINE L2 -704 2610 2374 214 171 37 37 chr2 41474615 41474697 -211781886 + (TATAA)n Simple_repeat Simple_repeat 4 85 0 444 294 123 25 chr2 41474702 41475059 -211781524 + L1ME LINE L1 5311 5702 -419 263 330 47 0 chr2 41476982 41477088 -211779495 + MIR3 SINE MIR 70 180 -28 200 159 0 23 chr2 41477339 41477383 -211779200 + (TATATG)n Simple_repeat Simple_repeat 6 48 0 204 40 0 0 chr2 41477383 41477408 -211779175 + (CA)n Simple_repeat Simple_repeat 2 26 0 733 192 0 15 chr2 41477412 41477542 -211779041 - FLAM_A SINE Alu -5 128 1 269 113 72 201 chr2 41477948 41478142 -211778441 - MER53 DNA DNA -20 169 1 232 265 99 37 chr2 41478409 41478571 -211778012 - L1ME LINE L1 -342 5779 5608 186 167 0 0 chr2 41479302 41479338 -211777245 + A-rich Low_complexity Low_complexity 2 37 0 438 179 104 37 chr2 41479767 41479901 -211776682 - MER103 DNA DNA -8 158 16 807 180 160 16 chr2 41481066 41481260 -211775323 - MER58A DNA MER1_type -2 222 1 685 276 38 66 chr2 41481521 41481875 -211774708 + L1MEc LINE L1 1896 2258 -3957 476 75 25 25 chr2 41481875 41481955 -211774628 + MADE1 DNA Mariner 1 80 0 685 276 38 66 chr2 41481955 41482398 -211774185 + L1MEc LINE L1 2258 2644 -3571 346 279 150 13 chr2 41482498 41482789 -211773794 + L3 LINE CR1 436 829 -748 658 212 92 102 chr2 41482844 41483016 -211773567 - L1ME3 LINE L1 -21 6141 5972 3689 191 97 16 chr2 41483016 41483811 -211772772 - MER21B LTR ERV1 0 863 5 658 212 92 102 chr2 41483811 41483921 -211772662 - L1ME3 LINE L1 -190 5972 5862 695 242 213 2 chr2 41483941 41484383 -211772200 - L1ME3 LINE L1 -1538 4608 4074 3258 170 39 8 chr2 41484426 41485013 -211771570 - MER6A DNA MER2_type 0 605 1 504 330 121 59 chr2 41485137 41485320 -211771263 + L3 LINE CR1 1001 1171 -406 1321 151 29 129 chr2 41485320 41485694 -211770889 + THE1C LTR MaLR 1 330 -45 2051 128 14 7 chr2 41485694 41485991 -211770592 - AluSq SINE Alu -14 299 1 1321 151 29 129 chr2 41485991 41486033 -211770550 + THE1C LTR MaLR 330 375 0 504 330 121 59 chr2 41486033 41486388 -211770195 + L3 LINE CR1 1171 1572 -5 661 279 31 22 chr2 41486685 41486911 -211769672 + MIR SINE MIR 6 233 -29 2075 138 42 17 chr2 41486926 41487281 -211769302 + THE1B LTR MaLR 1 364 0 7503 179 84 5 chr2 41487283 41488812 -211767771 + THE1B-int LTR MaLR 3 1651 0 2379 114 31 17 chr2 41488812 41489171 -211767412 + THE1B LTR MaLR 1 364 0 417 86 0 0 chr2 41489626 41489684 -211766899 + (CA)n Simple_repeat Simple_repeat 1 58 0 2600 176 17 0 chr2 41490407 41490867 -211765716 + MER70B LTR ERVL 1 468 -110 25 0 0 0 chr2 41491834 41491859 -211764724 + AT_rich Low_complexity Low_complexity 1 25 0 237 256 0 0 chr2 41492290 41492372 -211764211 + (TA)n Simple_repeat Simple_repeat 1 82 0 323 375 72 16 chr2 41492488 41492739 -211763844 + HAL1b LINE L1 221 485 -863 303 280 83 61 chr2 41493221 41493353 -211763230 + L2 LINE L2 2847 2981 -291 394 262 25 99 chr2 41493360 41493562 -211763021 + L2 LINE L2 3085 3271 -1 375 316 72 34 chr2 41496306 41496425 -211760158 + L1ME4a LINE L1 5635 5748 -373 495 0 0 0 chr2 41496425 41496480 -211760103 + (TTTC)n Simple_repeat Simple_repeat 2 56 0 2116 92 14 11 chr2 41496482 41496765 -211759818 - AluSp SINE Alu -29 284 1 375 316 72 34 chr2 41496765 41496905 -211759678 + L1ME4a LINE L1 5748 5907 -214 372 205 17 17 chr2 41497119 41497236 -211759347 + CT-rich Low_complexity Low_complexity 2 118 0 866 206 0 26 chr2 41497381 41497575 -211759008 - MER5A DNA MER1_type 0 189 1 326 319 5 69 chr2 41498367 41498555 -211758028 - MIR SINE MIR -79 183 8 561 68 0 0 chr2 41498708 41498782 -211757801 + (TA)n Simple_repeat Simple_repeat 2 75 0 2230 112 0 0 chr2 41498782 41499078 -211757505 - AluSq SINE Alu -17 296 1 1335 236 47 25 chr2 41499924 41500327 -211756256 - MER92A LTR ERV1 0 412 1 266 253 179 11 chr2 41500404 41500499 -211756084 + MER5A DNA MER1_type 73 183 -6 437 286 75 12 chr2 41500525 41500686 -211755897 + MIR SINE MIR 37 207 -55 2110 130 0 3 chr2 41500804 41501105 -211755478 - AluSx SINE Alu -1 311 12 7192 110 26 3 chr2 41501144 41502281 -211754302 - L1PA8A LINE L1 -1341 4805 3639 6179 79 3 32 chr2 41502281 41503626 -211752957 + L1PA8A LINE L1 4809 6130 -1 7192 110 26 3 chr2 41503626 41503637 -211752946 - L1P LINE L1 -2507 3639 3630 214 250 29 29 chr2 41504339 41504407 -211752176 + CT-rich Low_complexity Low_complexity 2 69 0 1868 201 81 0 chr2 41504836 41505230 -211751353 + L1MB5 LINE L1 5697 6122 -52 1826 154 74 3 chr2 41505753 41506077 -211750506 - MER7A DNA MER2_type 0 346 2 563 307 80 0 chr2 41507239 41507415 -211749168 + MIR SINE MIR 4 193 -69 237 222 48 0 chr2 41508016 41508079 -211748504 - MER45 DNA AcHobo 0 1581 1516 415 311 102 0 chr2 41509933 41510110 -211746473 - MIR SINE MIR -14 248 54 808 307 75 50 chr2 41510244 41510723 -211745860 + MLT1K LTR MaLR 13 503 -85 199 128 51 0 chr2 41511138 41511177 -211745406 - L2 LINE L2 0 3313 3273 222 235 39 0 chr2 41511257 41511308 -211745275 - L2 LINE L2 -325 2988 2936 642 242 0 0 chr2 41511779 41511903 -211744680 - MIR SINE MIR -79 183 60 444 331 45 113 chr2 41512551 41513106 -211743477 - L3 LINE CR1 -11 1566 1050 200 231 0 0 chr2 41513566 41513605 -211742978 + CT-rich Low_complexity Low_complexity 2 40 0 1070 176 4 64 chr2 41515697 41515930 -211740653 - MER20 DNA MER1_type 0 219 1 203 179 161 0 chr2 41516457 41516513 -211740070 - L2 LINE L2 -15 3298 3234 319 312 130 33 chr2 41517334 41517549 -211739034 - MIR SINE MIR -7 255 20 217 363 56 12 chr2 41517817 41517977 -211738606 + MIR SINE MIR 93 259 -3 203 77 0 26 chr2 41518790 41518829 -211737754 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 273 242 316 0 chr2 41518999 41519094 -211737489 + MIR SINE MIR 21 146 -62 284 260 27 0 chr2 41519403 41519476 -211737107 - MIR SINE MIR -27 235 161 710 309 31 0 chr2 41519618 41519809 -211736774 - MIR SINE MIR -21 241 45 204 312 225 0 chr2 41520405 41520543 -211736040 + MIR3 SINE MIR 10 178 -30 21 0 0 0 chr2 41521352 41521373 -211735210 + AT_rich Low_complexity Low_complexity 1 21 0 3671 150 24 43 chr2 41521642 41522383 -211734200 - L1MB2 LINE L1 -1 6170 5444 2753 217 78 24 chr2 41522529 41523274 -211733309 - MER21B LTR ERV1 -60 803 19 261 190 25 149 chr2 41523272 41523393 -211733190 - MER21B LTR ERV1 -757 106 1 * 2268 129 15 0 chr2 41523457 41523789 -211732794 + MER1B DNA MER1_type 1 337 0 203 258 34 34 chr2 41524039 41524128 -211732455 + (GGATG)n Simple_repeat Simple_repeat 1 89 0 1785 146 113 40 chr2 41524340 41524737 -211731846 + MSTA LTR MaLR 3 428 0 793 172 0 0 chr2 41525937 41526065 -211730518 + FLAM_C SINE Alu 5 132 -1 232 333 17 23 chr2 41530470 41530647 -211725936 - HAL1 LINE L1 -838 1669 1494 433 268 96 122 chr2 41530700 41531264 -211725319 - L1MDa LINE L1 -1160 1741 1228 24 53 0 0 chr2 41532245 41532283 -211724300 + AT_rich Low_complexity Low_complexity 1 38 0 282 367 48 20 chr2 41532428 41532575 -211724008 + L2 LINE L2 3122 3272 0 1449 271 89 34 chr2 41532716 41533212 -211723371 - MLT1E LTR MaLR 0 593 61 2003 138 59 8 chr2 41533212 41533568 -211723015 + THE1C LTR MaLR 2 375 0 1449 271 89 34 chr2 41533568 41533633 -211722950 - MLT1E LTR MaLR -532 61 1 402 270 49 54 chr2 41533634 41533819 -211722764 + MIR SINE MIR 78 261 -1 186 254 237 61 chr2 41534133 41534247 -211722336 + MIR3 SINE MIR 50 183 -25 388 335 87 14 chr2 41534802 41535089 -211721494 - MARNA DNA Mariner -133 453 146 394 115 64 0 chr2 41535147 41535225 -211721358 + L1PA13 LINE L1 6081 6163 0 327 250 76 0 chr2 41535286 41535378 -211721205 + MIR SINE MIR 53 151 -111 370 312 55 60 chr2 41535615 41535833 -211720750 - MIR SINE MIR -44 218 2 441 264 51 90 chr2 41535895 41536073 -211720510 + MER5B DNA MER1_type 1 171 -7 232 364 68 0 chr2 41536130 41536218 -211720365 + MIR SINE MIR 30 123 -85 182 250 120 65 chr2 41537270 41537378 -211719205 - MIR SINE MIR -132 130 17 5487 109 42 22 chr2 41538815 41539925 -211716658 - L1MA4A LINE L1 -7 6998 5861 735 183 15 0 chr2 41539929 41540060 -211716523 - FRAM SINE Alu -15 161 29 10609 169 43 28 chr2 41540062 41540212 -211716371 - L1MA4A LINE L1 -983 5865 5719 2017 138 6 13 chr2 41540212 41540524 -211716059 - AluSx SINE Alu -2 310 1 10609 169 43 28 chr2 41540524 41541447 -211715136 - L1MA4A LINE L1 -1129 5719 4811 1812 123 54 48 chr2 41541447 41541820 -211714763 + THE1C LTR MaLR 1 375 0 10609 169 43 28 chr2 41541820 41543237 -211713346 - L1MA4A LINE L1 -2037 4811 3337 8291 173 47 72 chr2 41543235 41545222 -211711361 - L1MA4A LINE L1 -4911 1938 2 * 1315 205 105 26 chr2 41545258 41545678 -211710905 - L1MDa LINE L1 -4516 2024 1572 272 296 96 30 chr2 41545817 41545952 -211710631 + MIR3 SINE MIR 21 164 -44 733 274 102 52 chr2 41547814 41548390 -211708193 - HAL1 LINE L1 -1367 1140 536 305 245 53 0 chr2 41548460 41548554 -211708029 - HAL1 LINE L1 -2408 99 1 367 260 0 60 chr2 41551043 41551143 -211705440 + L2 LINE L2 3220 3313 0 324 326 96 16 chr2 41551368 41551555 -211705028 - MIR SINE MIR -27 235 34 260 292 11 56 chr2 41551935 41552024 -211704559 - L2 LINE L2 -18 3254 3170 285 301 97 80 chr2 41552123 41552412 -211704171 + L2 LINE L2 2812 3105 -167 500 271 77 50 chr2 41555232 41555372 -211701211 - MLT1K LTR MaLR -252 336 186 1359 180 65 45 chr2 41555372 41555728 -211700855 - MLT1A1 LTR MaLR -2 363 1 500 271 77 50 chr2 41555728 41555808 -211700775 - MLT1K LTR MaLR -402 186 110 197 349 35 12 chr2 41556283 41556369 -211700214 - MIR SINE MIR -114 148 61 321 227 109 11 chr2 41556723 41556900 -211699683 - L1ME4a LINE L1 -236 5885 5691 866 294 99 51 chr2 41557180 41557673 -211698910 + MLT1H LTR MaLR 18 534 -15 264 399 6 39 chr2 41557900 41558078 -211698505 + MIR3 SINE MIR 1 172 -36 * 302 243 0 14 chr2 41558063 41558137 -211698446 - MIR SINE MIR 0 262 190 1750 254 91 22 chr2 41558686 41559516 -211697067 + L1ME3A LINE L1 5122 6011 -159 4270 206 28 13 chr2 41559696 41560789 -211695794 + L1P LINE L1 4254 5363 -783 391 273 22 14 chr2 41560803 41560942 -211695641 - L1ME3A LINE L1 -159 6011 5872 3799 112 105 7 chr2 41560942 41561656 -211694927 + L1PA16 LINE L1 5381 6164 -2 206 309 203 16 chr2 41562728 41562851 -211693732 - MIR3 SINE MIR -49 159 14 422 283 164 31 chr2 41563103 41563262 -211693321 - MER5A DNA MER1_type -1 188 9 538 248 32 11 chr2 41563267 41563428 -211693155 - MLT1A1 LTR MaLR -2 426 221 390 214 0 94 chr2 41563570 41563687 -211692896 - MLT1A1 LTR MaLR -259 106 1 7877 191 69 17 chr2 41563688 41565336 -211691247 - MLT1A1-int LTR MaLR -1 1734 1 1691 207 8 32 chr2 41565336 41565706 -211690877 - MLT1A1 LTR MaLR -2 363 1 1147 315 50 23 chr2 41565958 41566678 -211689905 - L2 LINE L2 -1 3312 2574 506 264 112 6 chr2 41567107 41567285 -211689298 - MER117 DNA MER1_type 0 197 1 645 267 81 38 chr2 41567333 41567569 -211689014 + MIR SINE MIR 5 250 -12 270 0 0 0 chr2 41567675 41567705 -211688878 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 2066 122 0 0 chr2 41568092 41568378 -211688205 - AluSx SINE Alu 0 312 27 254 73 24 0 chr2 41568924 41568965 -211687618 + (CA)n Simple_repeat Simple_repeat 2 43 0 339 292 49 14 chr2 41569185 41569329 -211687254 - L1MEc LINE L1 -4850 1460 1312 1056 258 87 95 chr2 41569343 41570589 -211685994 - L1MEc LINE L1 -4862 1257 22 355 367 33 70 chr2 41570621 41570921 -211685662 - L2 LINE L2 -18 3254 2966 996 306 21 24 chr2 41571101 41571477 -211685106 - LTR16B LTR ERVL -13 451 77 186 65 97 0 chr2 41573711 41573773 -211682810 + (TA)n Simple_repeat Simple_repeat 1 68 0 195 184 0 0 chr2 41574399 41574437 -211682146 + (TA)n Simple_repeat Simple_repeat 1 38 0 226 208 17 110 chr2 41574474 41574647 -211681936 + L1 LINE L1 2242 2398 -3748 2038 129 0 0 chr2 41574778 41575058 -211681525 + AluSg SINE Alu 1 280 -30 334 289 69 37 chr2 41575065 41575283 -211681300 + L1MC4a LINE L1 2505 2729 -3417 297 0 0 0 chr2 41575289 41575322 -211681261 + (CA)n Simple_repeat Simple_repeat 2 34 0 294 284 121 26 chr2 41575519 41575983 -211680600 + L1MC4a LINE L1 4890 5397 -749 2374 83 0 16 chr2 41576006 41576320 -211680263 - AluY SINE Alu -2 309 1 939 226 21 24 chr2 41576340 41576382 -211680201 + L1MC4a LINE L1 5722 5763 -2045 920 216 98 77 chr2 41576382 41576770 -211679813 + MSTD LTR MaLR 1 396 0 939 226 21 24 chr2 41576770 41577014 -211679569 + L1MC4a LINE L1 5763 6007 -1801 325 358 66 0 chr2 41577699 41577836 -211678747 + MIR SINE MIR 47 192 -70 215 278 87 48 chr2 41579052 41579178 -211677405 + MIR SINE MIR 99 229 -33 412 208 28 62 chr2 41579369 41579513 -211677070 - MER112 DNA MER1_type -6 254 116 22 35 0 0 chr2 41579820 41579849 -211676734 + AT_rich Low_complexity Low_complexity 1 29 0 405 323 75 1 chr2 41580273 41580413 -211676170 - MIR3 SINE MIR -26 182 30 1067 124 0 0 chr2 41581142 41581287 -211675296 - AluSg/x SINE Alu -4 308 164 226 213 66 49 chr2 41582127 41582188 -211674395 - L2 LINE L2 -7 3265 3204 266 254 0 0 chr2 41582235 41582290 -211674293 - L2 LINE L2 -3 3269 3215 1667 107 8 0 chr2 41582313 41582557 -211674026 - MLT2A2 LTR ERVL -207 246 1 38390 92 15 3 chr2 41582557 41588020 -211668563 - HERVL-A2-A2 LTR ERVL 0 5654 124 1911 104 0 17 chr2 41588018 41588305 -211668278 + HERVL LTR ERVL 779 1060 -4594 * 872 92 0 0 chr2 41588302 41588433 -211668150 - HERVL-A2-A2 LTR ERVL -5523 131 1 * 2165 141 62 33 chr2 41588433 41588454 -211668129 - MLT2A2 LTR ERVL 0 554 535 2845 174 20 63 chr2 41588454 41589093 -211667490 - LTR9 LTR ERV1 0 612 1 2165 141 62 33 chr2 41589093 41589582 -211667001 - MLT2A2 LTR ERVL -19 535 3 924 197 67 0 chr2 41589667 41589860 -211666723 - MER58A DNA MER1_type -9 215 10 214 383 17 0 chr2 41590255 41590315 -211666268 - L2 LINE L2 -90 3182 3122 2057 128 7 7 chr2 41590706 41591004 -211665579 + AluSx SINE Alu 1 298 -14 313 222 81 0 chr2 41591730 41591829 -211664754 - L1ME4a LINE L1 -258 5863 5757 1008 260 29 55 chr2 41591918 41592431 -211664152 + MLT1G1 LTR MaLR 1 595 0 457 276 72 17 chr2 41592431 41592612 -211663971 - L1ME4a LINE L1 -451 5670 5480 262 218 46 23 chr2 41593355 41593442 -211663141 - L1ME4a LINE L1 -72 6049 5961 261 282 80 12 chr2 41593594 41593757 -211662826 - L1ME4a LINE L1 -373 5748 5575 525 232 74 20 chr2 41594404 41594555 -211662028 - MER5A DNA MER1_type -11 167 20 583 299 66 11 chr2 41594685 41594956 -211661627 + LTR16A LTR ERVL 157 442 -8 371 357 57 6 chr2 41595471 41595628 -211660955 + MIR SINE MIR 2 166 -96 739 193 114 50 chr2 41595694 41595896 -211660687 - MIR SINE MIR 0 262 48 879 148 60 16 chr2 41596067 41596250 -211660333 + L1MA8 LINE L1 5949 6139 -152 10117 45 3 0 chr2 41596258 41598278 -211658305 - L1PA4 LINE L1 -3 6152 4128 7074 33 3 0 chr2 41598278 41599177 -211657406 + L1PA4 LINE L1 3229 4130 -2016 690 131 39 8 chr2 41599171 41599301 -211657282 + L1MA8 LINE L1 6127 6260 -31 * 803 131 46 7 chr2 41599177 41599324 -211657259 + L1MA8 LINE L1 6127 6285 -6 183 167 0 0 chr2 41600359 41600401 -211656182 + (TTCA)n Simple_repeat Simple_repeat 4 45 0 407 308 95 6 chr2 41601187 41601356 -211655227 - L2 LINE L2 -426 2888 2705 415 300 103 30 chr2 41601560 41601793 -211654790 - MIR SINE MIR -11 251 2 187 195 65 65 chr2 41601848 41601925 -211654658 - MIR SINE MIR -63 145 69 984 159 7 4 chr2 41602638 41602916 -211653667 + (TA)n Simple_repeat Simple_repeat 1 279 0 301 171 32 8 chr2 41602977 41603100 -211653483 + (TA)n Simple_repeat Simple_repeat 1 126 0 288 234 96 0 chr2 41603102 41603196 -211653387 + MER103 DNA DNA 62 164 -2 2863 92 11 58 chr2 41604298 41604764 -211651819 - MLT2A1 LTR ERVL 0 444 1 293 297 51 25 chr2 41607031 41607149 -211649434 + MIR3 SINE MIR 83 203 -5 10452 37 2 0 chr2 41607181 41609223 -211647360 - L1PA3 LINE L1 0 6155 4112 26515 47 1 5 chr2 41609223 41612723 -211643860 + L1PA3 LINE L1 622 4107 -2039 180 349 108 0 chr2 41613998 41614081 -211642502 - MIR SINE MIR -66 142 51 347 332 40 5 chr2 41615416 41615615 -211640968 - L1ME3 LINE L1 -336 5826 5621 290 241 26 17 chr2 41615768 41615884 -211640699 - L1ME3 LINE L1 -930 5429 5313 189 261 130 0 chr2 41615906 41615975 -211640608 - MIR SINE MIR -21 241 164 342 283 29 35 chr2 41616168 41616341 -211640242 - L1ME3 LINE L1 -2453 3693 3522 279 259 0 0 chr2 41616679 41616764 -211639819 + GA-rich Low_complexity Low_complexity 4 88 0 23 33 0 0 chr2 41616986 41617016 -211639567 + AT_rich Low_complexity Low_complexity 1 30 0 324 285 73 20 chr2 41617059 41617210 -211639373 - L1MC3 LINE L1 -1860 5925 5767 482 282 43 43 chr2 41617379 41617542 -211639041 - L2 LINE L2 -302 3011 2849 860 45 0 9 chr2 41617542 41617654 -211638929 + L1MA8 LINE L1 5620 5730 -570 1530 145 24 24 chr2 41617658 41617955 -211638628 + L1MA8 LINE L1 5813 6109 -182 474 216 0 0 chr2 41617960 41618048 -211638535 + Tigger3(Golem) DNA MER2_type 11 98 -2931 4045 129 60 7 chr2 41618051 41618795 -211637788 + Tigger3(Golem) DNA MER2_type 2246 3029 0 617 193 84 0 chr2 41618795 41618961 -211637622 + L1MA8 LINE L1 6108 6287 -4 354 204 258 0 chr2 41619055 41619187 -211637396 - L2 LINE L2 -568 2746 2581 285 304 88 53 chr2 41619185 41619356 -211637227 - MIR SINE MIR -60 202 26 * 224 333 0 0 chr2 41619930 41620005 -211636578 - MIR3 SINE MIR -25 183 109 326 289 96 15 chr2 41620108 41620243 -211636340 + MIR SINE MIR 63 208 -54 461 307 13 7 chr2 41620728 41620878 -211635705 + MIR SINE MIR 68 218 -44 2569 180 39 10 chr2 41620878 41621394 -211635189 + MER44D DNA MER2_type 20 605 0 23 0 0 0 chr2 41622550 41622573 -211634010 + AT_rich Low_complexity Low_complexity 1 23 0 446 286 136 23 chr2 41624547 41624767 -211631816 - MIR SINE MIR -15 247 3 2520 49 10 3 chr2 41625428 41625736 -211630847 - AluY SINE Alu 0 311 2 402 241 98 0 chr2 41627381 41627493 -211629090 - L2 LINE L2 -4 3309 3187 21 36 0 0 chr2 41627833 41627861 -211628722 + AT_rich Low_complexity Low_complexity 1 28 0 1974 126 3 7 chr2 41629297 41629598 -211626985 - AluSg SINE Alu -10 300 1 194 119 48 0 chr2 41629685 41629727 -211626856 + (TATATG)n Simple_repeat Simple_repeat 4 47 0 1445 158 217 17 chr2 41629837 41630192 -211626391 - MSTA LTR MaLR 0 428 3 1563 228 17 0 chr2 41630648 41630937 -211625646 - AluJb SINE Alu -18 294 1 1102 186 38 0 chr2 41631172 41631382 -211625201 - MER20 DNA MER1_type 0 219 2 476 270 69 54 chr2 41631731 41632120 -211624463 + L1MC4a LINE L1 5608 6002 -119 753 179 152 33 chr2 41632284 41632468 -211624115 + MER20 DNA MER1_type 4 209 -10 183 42 0 0 chr2 41632655 41632679 -211623904 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 40165 38 23 3 chr2 41632679 41638698 -211617885 - L1PA2 LINE L1 -8 6147 1 260 230 58 58 chr2 41638966 41639053 -211617530 - MLT1L LTR MaLR -362 253 167 4598 141 29 17 chr2 41639131 41639590 -211616993 + L1PA16 LINE L1 5313 5789 -377 2331 71 0 3 chr2 41639590 41639900 -211616683 + AluY SINE Alu 1 309 0 4598 141 29 17 chr2 41639900 41640276 -211616307 + L1PA16 LINE L1 5789 6159 -7 377 232 42 68 chr2 41642093 41642283 -211614300 + L1MEc LINE L1 2187 2371 -4025 1622 173 0 11 chr2 41642454 41642725 -211613858 - AluJb SINE Alu -39 273 6 2504 114 5 16 chr2 41644248 41644616 -211611967 + THE1B LTR MaLR 1 364 0 10723 114 15 6 chr2 41644616 41646183 -211610400 + THE1B-int LTR MaLR 1 1580 0 2023 124 6 32 chr2 41646183 41646530 -211610053 + THE1B LTR MaLR 1 338 -26 4133 169 48 22 chr2 41647201 41647974 -211608609 - MER54B LTR ERVL 0 793 1 754 139 0 0 chr2 41648352 41648474 -211608109 - L1P LINE L1 -4924 1222 1101 15695 51 11 2 chr2 41648474 41652030 -211604553 + L1PA5 LINE L1 2559 6149 -5 330 211 60 15 chr2 41652030 41652133 -211604450 + MIR SINE MIR 112 219 -43 396 278 158 8 chr2 41652377 41652510 -211604073 - L2 LINE L2 -2 3270 3118 385 241 23 0 chr2 41653468 41653555 -211603028 + L2 LINE L2 3221 3309 -4 4909 160 54 14 chr2 41654164 41655372 -211601211 + L1MA6 LINE L1 5058 6300 0 461 243 49 14 chr2 41655433 41655577 -211601006 - MIR SINE MIR -14 248 100 1107 213 97 37 chr2 41656003 41656271 -211600312 + AluJb SINE Alu 6 289 -23 193 263 32 63 chr2 41657577 41657672 -211598911 - L2 LINE L2 -8 3264 3173 395 311 76 44 chr2 41657726 41658041 -211598542 - LTR16C LTR ERVL -93 398 74 228 200 53 53 chr2 41658159 41658234 -211598349 - L1ME4a LINE L1 -82 6039 5965 273 276 17 33 chr2 41658372 41658541 -211598042 - LTR16A LTR ERVL -284 166 1 2165 142 7 0 chr2 41659602 41659971 -211596612 - AluSx SINE Alu 0 371 1 392 269 54 54 chr2 41660277 41660624 -211595959 + MLT1J2 LTR MaLR 26 369 -40 528 326 124 0 chr2 41660677 41660895 -211595688 + MIR SINE MIR 15 259 -3 228 200 91 0 chr2 41661820 41661875 -211594708 + L2 LINE L2 3213 3272 0 223 238 0 0 chr2 41663430 41663495 -211593088 + (TG)n Simple_repeat Simple_repeat 1 65 0 21 57 0 0 chr2 41663971 41664006 -211592577 + AT_rich Low_complexity Low_complexity 1 35 0 306 0 0 0 chr2 41664593 41664627 -211591956 + (T)n Simple_repeat Simple_repeat 1 34 0 778 176 0 50 chr2 41664904 41665063 -211591520 - L1PB4 LINE L1 -2 6154 6004 215 136 45 0 chr2 41666388 41666432 -211590151 + CT-rich Low_complexity Low_complexity 4 49 0 2024 102 4 4 chr2 41666432 41666706 -211589877 - AluSc SINE Alu -35 274 1 321 183 17 0 chr2 41667114 41667174 -211589409 + MLT1D LTR MaLR 1 61 -444 298 275 11 0 chr2 41667171 41667262 -211589321 + MLT1J2 LTR MaLR 535 626 0 * 593 259 113 15 chr2 41668015 41668281 -211588302 + LTR43 LTR ERV1 179 470 -132 2398 88 0 0 chr2 41668301 41668607 -211587976 - AluSc SINE Alu -3 306 1 210 222 0 22 chr2 41669326 41669371 -211587212 + G-rich Low_complexity Low_complexity 4 47 0 2145 120 3 28 chr2 41669427 41669744 -211586839 - AluSp SINE Alu -4 309 1 370 291 259 46 chr2 41669780 41670348 -211586235 + L2 LINE L2 1710 2398 -916 200 220 0 20 chr2 41670561 41670611 -211585972 + T-rich Low_complexity Low_complexity 2 50 0 643 230 34 7 chr2 41672627 41672775 -211583808 + MIR SINE MIR 90 241 -21 1069 279 84 9 chr2 41672857 41673204 -211583379 - L2 LINE L2 -710 2604 2232 272 370 74 59 chr2 41674398 41674668 -211581915 + L2 LINE L2 2998 3271 -1 481 324 62 6 chr2 41674837 41675013 -211581570 + MER5A DNA MER1_type 3 188 -1 314 240 0 62 chr2 41675431 41675527 -211581056 + L1MC4 LINE L1 6614 6703 -1339 303 322 0 0 chr2 41675447 41675537 -211581046 - L1MC4 LINE L1 -1339 6703 6614 * 224 333 103 16 chr2 41675814 41675940 -211580643 + MIR SINE MIR 72 208 -54 690 329 20 15 chr2 41675980 41676381 -211580202 + L1MEc LINE L1 40 442 -5954 497 236 56 6 chr2 41676545 41676723 -211579860 + L1MEc LINE L1 726 912 -5484 966 204 144 51 chr2 41677420 41677754 -211578829 + MLT1A1 LTR MaLR 1 365 0 2130 154 67 9 chr2 41678006 41678454 -211578129 + L1MB2 LINE L1 5696 6169 -2 1954 93 0 30 chr2 41678538 41678806 -211577777 + AluSq SINE Alu 1 260 -53 341 336 16 16 chr2 41678820 41678942 -211577641 - MIR3 SINE MIR -73 135 14 21 0 0 0 chr2 41679052 41679073 -211577510 + AT_rich Low_complexity Low_complexity 1 21 0 3299 191 19 63 chr2 41679307 41680181 -211576402 - L1MA9 LINE L1 -145 6167 5332 208 336 131 33 chr2 41680246 41680368 -211576215 - MIR3 SINE MIR -71 137 4 7242 47 5 1 chr2 41680812 41681817 -211574766 + L1PA5 LINE L1 5143 6151 -3 195 129 0 0 chr2 41682325 41682356 -211574227 + (TG)n Simple_repeat Simple_repeat 1 31 0 630 302 125 0 chr2 41682528 41682760 -211573823 - MIR SINE MIR 0 262 2 3397 116 0 13 chr2 41683102 41683638 -211572945 + L1PA13 LINE L1 5634 6162 -1 743 254 51 11 chr2 41683810 41683987 -211572596 + MER5A DNA MER1_type 5 188 -1 1570 177 69 100 chr2 41684306 41684786 -211571797 - MLT1C LTR MaLR -2 465 1 45 19 0 0 chr2 41685084 41685136 -211571447 + AT_rich Low_complexity Low_complexity 1 52 0 202 275 43 14 chr2 41685162 41685231 -211571352 + MIR SINE MIR 109 179 -83 1386 137 50 0 chr2 41685615 41685834 -211570749 - MER30 DNA MER1_type 0 230 1 503 269 119 40 chr2 41686335 41686536 -211570047 + MIR SINE MIR 20 236 -26 327 25 0 0 chr2 41687890 41687930 -211568653 + (TG)n Simple_repeat Simple_repeat 1 40 0 22 35 0 0 chr2 41688652 41688681 -211567902 + AT_rich Low_complexity Low_complexity 1 29 0 205 29 59 0 chr2 41688708 41688742 -211567841 + (TAA)n Simple_repeat Simple_repeat 3 38 0 1875 127 16 95 chr2 41689971 41690350 -211566233 - L1PA16 LINE L1 -4 6162 5814 20380 187 15 17 chr2 41690355 41690451 -211566132 - L1PA13 LINE L1 -19 7582 7487 2628 93 27 5 chr2 41690451 41690818 -211565765 - THE1C LTR MaLR 0 375 1 20380 187 15 17 chr2 41690818 41695045 -211561538 - L1PA13 LINE L1 -114 7487 1923 2117 121 0 24 chr2 41695045 41695342 -211561241 + AluSq SINE Alu 1 290 -23 20380 187 15 17 chr2 41695342 41697259 -211559324 - L1PA13 LINE L1 -5678 1923 2 3501 173 48 9 chr2 41697260 41698563 -211558020 - L1PA16 LINE L1 -332 5834 4476 288 70 0 0 chr2 41698690 41698733 -211557850 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 2062 53 19 0 chr2 41698740 41699006 -211557577 - L1PA7 LINE L1 -3 6151 5881 11118 92 9 1 chr2 41699036 41700811 -211555772 - L1P3 LINE L1 -645 5509 3721 1407 203 125 24 chr2 41700812 41701235 -211555348 - L1 LINE L1 -1662 4484 4019 193 296 136 34 chr2 41701264 41701352 -211555231 - MIR SINE MIR -123 139 43 297 244 130 93 chr2 41701529 41701775 -211554808 - MLT1K LTR MaLR -51 537 283 275 281 55 31 chr2 41702163 41702291 -211554292 + MIR3 SINE MIR 24 154 -54 22 35 0 0 chr2 41702432 41702461 -211554122 + AT_rich Low_complexity Low_complexity 1 29 0 230 271 41 82 chr2 41703929 41704051 -211552532 - MIR SINE MIR -50 212 96 2002 139 7 0 chr2 41704782 41705077 -211551506 + AluSx SINE Alu 1 297 -15 21266 158 35 14 chr2 41705095 41709864 -211546719 - L1MA3 LINE L1 -400 7324 2348 1615 201 10 0 chr2 41709864 41710167 -211546416 - AluJb SINE Alu -2 310 5 21266 158 35 14 chr2 41710167 41712553 -211544030 - L1MA3 LINE L1 -5376 2348 14 787 155 92 6 chr2 41713449 41713623 -211542960 - MER53 DNA DNA 0 189 1 380 256 12 113 chr2 41713624 41713784 -211542799 - MER5B DNA MER1_type -34 144 1 231 153 0 51 chr2 41714763 41714822 -211541761 + L1MA3 LINE L1 6250 6305 0 293 287 96 38 chr2 41715281 41715438 -211541145 + MIR SINE MIR 8 173 -89 207 0 0 0 chr2 41715440 41715463 -211541120 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2202 107 0 0 chr2 41715465 41715754 -211540829 - AluSg SINE Alu -21 289 1 191 59 0 29 chr2 41715761 41715795 -211540788 + (TTTTTA)n Simple_repeat Simple_repeat 4 36 0 1133 260 24 0 chr2 41716192 41716446 -211540137 - MIR SINE MIR -1 261 2 2073 107 23 7 chr2 41716598 41716906 -211539677 + L1PA13 LINE L1 5837 6149 -14 680 313 45 4 chr2 41719054 41719300 -211537283 + MIR SINE MIR 1 256 -6 1917 169 49 53 chr2 41719376 41719844 -211536739 - MER31B LTR ERV1 0 466 1 582 295 33 40 chr2 41719886 41720107 -211536476 - MIR SINE MIR -7 255 38 293 384 0 0 chr2 41721127 41721226 -211535357 + L2 LINE L2 3174 3272 0 21 57 0 0 chr2 41722347 41722382 -211534201 + AT_rich Low_complexity Low_complexity 1 35 0 709 198 42 68 chr2 41725845 41726037 -211530546 - MER5A DNA MER1_type 0 189 3 648 118 0 0 chr2 41730335 41730428 -211526155 + AluS SINE Alu 1 93 -219 960 18 0 0 chr2 41731274 41731383 -211525200 + AluYa5/8 SINE Alu 197 305 -5 26 0 0 0 chr2 41731948 41731974 -211524609 + AT_rich Low_complexity Low_complexity 1 26 0 326 268 0 31 chr2 41737131 41737228 -211519355 + L2 LINE L2 3189 3282 -31 191 125 25 0 chr2 41738965 41739005 -211517578 + A-rich Low_complexity Low_complexity 2 42 0 214 143 20 20 chr2 41739270 41739319 -211517264 + (TA)n Simple_repeat Simple_repeat 2 50 0 193 353 88 12 chr2 41740002 41740172 -211516411 + MER5A DNA MER1_type 7 189 0 2390 35 3 0 chr2 41740395 41740684 -211515899 - L1PA2 LINE L1 -4 6151 5862 588 252 117 33 chr2 41740957 41741171 -211515412 + MIR SINE MIR 4 235 -27 2072 110 0 63 chr2 41741341 41741659 -211514924 + AluSx SINE Alu 1 298 -14 290 342 106 15 chr2 41742137 41742336 -211514247 - MIR SINE MIR -24 238 22 261 0 0 0 chr2 41742686 41742715 -211513868 + (T)n Simple_repeat Simple_repeat 1 29 0 315 276 200 0 chr2 41744502 41744607 -211511976 + MIR3 SINE MIR 60 185 -23 508 301 16 48 chr2 41744972 41745056 -211511527 + MER5A DNA MER1_type 8 93 -96 1454 80 0 15 chr2 41745056 41745256 -211511327 - MER107 DNA MER1_type 0 197 1 508 301 16 48 chr2 41745256 41745357 -211511226 + MER5A DNA MER1_type 93 187 -2 319 174 163 0 chr2 41745707 41745799 -211510784 + MIR SINE MIR 156 262 0 255 170 0 0 chr2 41746285 41746332 -211510251 + (CA)n Simple_repeat Simple_repeat 1 47 0 365 284 37 30 chr2 41746616 41746750 -211509833 - MER5B DNA MER1_type -13 165 31 243 257 100 14 chr2 41748687 41748827 -211507756 + L1MB8 LINE L1 5588 5739 -382 183 80 0 0 chr2 41749826 41749851 -211506732 + (GAAAA)n Simple_repeat Simple_repeat 4 28 0 260 343 28 9 chr2 41750912 41751020 -211505563 + L2 LINE L2 3162 3271 -1 823 232 20 16 chr2 41752995 41753245 -211503338 + L1MB8 LINE L1 5926 6176 -2 1900 149 3 17 chr2 41753313 41753614 -211502969 - AluJo SINE Alu -15 297 1 570 270 83 61 chr2 41755120 41755350 -211501233 - MIR SINE MIR -8 254 20 234 0 0 0 chr2 41755937 41755963 -211500620 + (T)n Simple_repeat Simple_repeat 1 26 0 268 304 59 52 chr2 41756300 41756435 -211500148 + MIR SINE MIR 13 148 -114 283 304 170 18 chr2 41756475 41756587 -211499996 + MER91C DNA MER1_type 1 129 -11 2378 92 0 0 chr2 41758154 41758470 -211498113 - AluSx SINE Alu 0 316 1 1089 328 155 32 chr2 41758931 41759504 -211497079 - L2 LINE L2 -126 3187 2686 2027 130 0 37 chr2 41759504 41759826 -211496757 + AluSx SINE Alu 1 310 -2 1089 328 155 32 chr2 41759826 41760219 -211496364 - L2 LINE L2 -627 2686 2100 559 270 31 25 chr2 41762114 41762277 -211494306 - MIR SINE MIR -14 248 85 429 272 123 25 chr2 41762641 41762803 -211493780 - MER5A DNA MER1_type -11 178 1 324 349 124 48 chr2 41764347 41764553 -211492030 + L2 LINE L2 2891 3080 -192 591 217 133 0 chr2 41764553 41764719 -211491864 + MER5A DNA MER1_type 1 188 -1 324 349 124 48 chr2 41764719 41764867 -211491716 + L2 LINE L2 3080 3272 0 1903 167 20 48 chr2 41765751 41766147 -211490436 + MLT1B LTR MaLR 1 385 -5 224 243 0 29 chr2 41766223 41766293 -211490290 + T-rich Low_complexity Low_complexity 5 72 0 255 31 0 0 chr2 41767013 41767045 -211489538 + (TG)n Simple_repeat Simple_repeat 1 32 0 277 273 49 45 chr2 41767955 41768100 -211488483 + MIR SINE MIR 28 185 -63 571 304 25 25 chr2 41768322 41768526 -211488057 - MIR SINE MIR -20 242 39 1216 233 50 52 chr2 41768889 41769365 -211487218 - L1MA9 LINE L1 -38 6274 5800 216 295 0 0 chr2 41769800 41769861 -211486722 + (TG)n Simple_repeat Simple_repeat 1 61 0 1458 115 188 0 chr2 41770518 41770779 -211485804 - MER1A DNA MER1_type 0 529 220 333 270 30 20 chr2 41771968 41772068 -211484515 - MIR SINE MIR -75 187 87 203 243 129 0 chr2 41772725 41772795 -211483788 + MIR SINE MIR 72 150 -112 704 286 181 48 chr2 41773307 41773705 -211482878 - L2 LINE L2 0 3313 2863 189 223 159 102 chr2 41774050 41774207 -211482376 + MIR3 SINE MIR 41 206 -2 212 86 29 0 chr2 41775334 41775369 -211481214 + (TG)n Simple_repeat Simple_repeat 2 37 0 302 245 0 92 chr2 41775465 41775563 -211481020 - L2 LINE L2 0 3272 3184 1926 148 0 36 chr2 41776490 41776794 -211479789 - AluSx SINE Alu -19 293 1 824 179 12 24 chr2 41776894 41777062 -211479521 + FAM SINE Alu 1 166 -9 229 305 12 49 chr2 41777391 41777473 -211479110 - MIR SINE MIR -145 117 39 391 288 57 48 chr2 41778108 41778302 -211478281 + MIR SINE MIR 11 210 -52 2311 81 0 72 chr2 41778371 41778705 -211477878 - AluY SINE Alu -1 310 1 1519 148 17 4 chr2 41778746 41778983 -211477600 - AluJo SINE Alu -12 300 61 2329 70 0 0 chr2 41779201 41779507 -211477076 - AluY SINE Alu 0 306 1 437 341 8 0 chr2 41780303 41780432 -211476151 - MIR3 SINE MIR -21 187 58 335 325 13 13 chr2 41780820 41780977 -211475606 + (TG)n Simple_repeat Simple_repeat 2 158 0 254 281 35 61 chr2 41781019 41781133 -211475450 + MIR SINE MIR 33 143 -119 258 251 52 103 chr2 41781335 41781545 -211475038 - MIR SINE MIR -75 187 3 529 326 48 13 chr2 41783190 41783417 -211473166 + L2 LINE L2 3041 3275 -38 821 230 69 43 chr2 41791189 41791580 -211465003 - MER113 DNA MER1_type? -64 457 57 22 56 0 0 chr2 41791920 41791956 -211464627 + AT_rich Low_complexity Low_complexity 1 36 0 299 254 0 15 chr2 41792014 41792081 -211464502 + L2 LINE L2 3242 3307 -6 210 236 46 196 chr2 41792191 41792517 -211464066 - L2 LINE L2 -95 3177 2901 1741 185 0 13 chr2 41793737 41794039 -211462544 + AluJb SINE Alu 1 298 -14 187 214 71 0 chr2 41794933 41794975 -211461608 + MIR SINE MIR 118 162 -100 437 307 0 0 chr2 41795160 41795274 -211461309 + MIR SINE MIR 33 146 -62 2341 76 0 3 chr2 41796739 41797027 -211459556 + AluSc SINE Alu 1 287 -22 387 364 11 30 chr2 41797210 41797474 -211459109 + L3 LINE CR1 655 913 -664 33 66 0 0 chr2 41798271 41798332 -211458251 + AT_rich Low_complexity Low_complexity 1 61 0 226 274 0 0 chr2 41799559 41799610 -211456973 + (TG)n Simple_repeat Simple_repeat 2 52 0 238 262 16 0 chr2 41802976 41803037 -211453546 + L1ME4a LINE L1 5987 6048 -73 27 73 0 0 chr2 41803059 41803114 -211453469 + AT_rich Low_complexity Low_complexity 1 55 0 2396 97 0 0 chr2 41805030 41805338 -211451245 - AluSq SINE Alu -5 308 1 350 273 75 44 chr2 41807138 41807297 -211449286 - MIR SINE MIR -37 171 52 434 191 229 46 chr2 41807615 41807746 -211448837 + MER5A DNA MER1_type 33 187 -2 438 299 45 19 chr2 41807821 41807958 -211448625 + MER5B DNA MER1_type 6 149 -29 1484 161 3 74 chr2 41807958 41808257 -211448326 + AluJo SINE Alu 7 284 -28 438 299 45 19 chr2 41808257 41808273 -211448310 + MER5B DNA MER1_type 149 163 -15 229 225 0 0 chr2 41808289 41808329 -211448254 - MER5B DNA MER1_type -127 51 12 22 56 0 0 chr2 41808345 41808381 -211448202 + AT_rich Low_complexity Low_complexity 1 36 0 252 122 0 0 chr2 41808971 41809012 -211447571 + (A)n Simple_repeat Simple_repeat 1 41 0 4360 148 43 28 chr2 41809012 41809867 -211446716 + L1MB7 LINE L1 5317 6184 0 315 373 25 19 chr2 41810748 41810909 -211445674 + MIR SINE MIR 18 179 -83 1977 113 29 4 chr2 41813417 41813692 -211442891 - AluSx SINE Alu -30 282 1 315 230 198 0 chr2 41813694 41813820 -211442763 - L1ME4a LINE L1 -3 6118 5968 381 325 99 0 chr2 41814374 41814525 -211442058 - MIR3 SINE MIR -41 167 2 192 40 0 0 chr2 41815004 41815029 -211441554 + (TG)n Simple_repeat Simple_repeat 2 26 0 23 0 0 0 chr2 41815838 41815861 -211440722 + AT_rich Low_complexity Low_complexity 1 23 0 186 194 15 90 chr2 41817074 41817141 -211439442 + L2 LINE L2 3201 3262 -10 245 282 14 28 chr2 41817374 41817445 -211439138 - L2 LINE L2 0 3272 3203 342 0 0 0 chr2 41818548 41818586 -211437997 + (TG)n Simple_repeat Simple_repeat 1 38 0 657 63 0 0 chr2 41824252 41824347 -211432236 + (TA)n Simple_repeat Simple_repeat 1 95 0 1867 146 7 40 chr2 41827793 41828094 -211428489 - AluJb SINE Alu -21 291 1 959 189 77 4 chr2 41828781 41829014 -211427569 - MER33 DNA MER1_type -74 250 1 518 125 83 17 chr2 41829221 41829341 -211427242 + L1MA8 LINE L1 6164 6291 0 622 26 0 0 chr2 41829492 41829568 -211427015 - L1PA13 LINE L1 -341 5827 5752 2214 100 16 0 chr2 41829568 41829888 -211426695 + L1PA13 LINE L1 5835 6159 -4 1597 234 115 16 chr2 41830720 41831284 -211425299 + HsTC2 DNA Tc2 1274 1893 -5 21 0 0 0 chr2 41831595 41831616 -211424967 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 41831663 41831684 -211424899 + AT_rich Low_complexity Low_complexity 1 21 0 206 208 62 0 chr2 41832962 41833010 -211423573 - MIR3 SINE MIR -7 201 151 910 290 95 39 chr2 41833046 41833743 -211422840 - L2 LINE L2 -8 3305 2579 1009 226 22 40 chr2 41833744 41834019 -211422564 - L2 LINE L2 -1805 1509 1240 245 178 0 0 chr2 41834054 41834099 -211422484 - MER117 DNA MER1_type -132 65 21 276 364 58 55 chr2 41835386 41835749 -211420834 - L2 LINE L2 -955 2359 1996 2008 141 3 0 chr2 41836362 41836661 -211419922 - AluSc SINE Alu -9 300 1 2009 106 33 23 chr2 41838514 41838816 -211417767 - AluSg SINE Alu -5 305 1 191 205 0 0 chr2 41839206 41839245 -211417338 + MIR SINE MIR 224 262 0 1307 208 24 51 chr2 41839260 41839434 -211417149 - AluJo SINE Alu -26 286 122 2890 16 0 0 chr2 41839434 41839750 -211416833 + AluYb8 SINE Alu 1 316 -2 1307 208 24 51 chr2 41839750 41839869 -211416714 - AluJo SINE Alu -190 122 1 6184 93 14 6 chr2 41840096 41841501 -211415082 - L1PA8 LINE L1 0 6172 4719 292 93 0 0 chr2 41842613 41842656 -211413927 + MADE1 DNA Mariner 38 80 0 252 0 0 0 chr2 41843954 41843982 -211412601 + (T)n Simple_repeat Simple_repeat 1 28 0 186 257 20 10 chr2 41844241 41844342 -211412241 + GA-rich Low_complexity Low_complexity 1 102 0 13282 84 9 0 chr2 41844965 41847604 -211408979 + L1PA7 LINE L1 3501 6152 -2 223 285 32 89 chr2 41848616 41848774 -211407809 - MER5B DNA MER1_type -3 175 27 741 103 34 0 chr2 41848854 41848971 -211407612 + L1P LINE L1 5228 5348 -798 413 335 38 32 chr2 41849306 41849491 -211407092 + MIR SINE MIR 77 262 0 2066 80 53 3 chr2 41851482 41851783 -211404800 + L1PA13 LINE L1 5829 6144 -19 22 0 0 0 chr2 41851784 41851806 -211404777 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 41852141 41852163 -211404420 + AT_rich Low_complexity Low_complexity 1 22 0 383 308 47 30 chr2 41854049 41854218 -211402365 - MIR3 SINE MIR -32 176 5 21 0 0 0 chr2 41854707 41854728 -211401855 + AT_rich Low_complexity Low_complexity 1 21 0 40598 36 22 2 chr2 41856679 41862706 -211393877 - L1PA2 LINE L1 0 6155 5 479 261 83 22 chr2 41863492 41863672 -211392911 - MIR3 SINE MIR -14 194 4 349 133 0 0 chr2 41863717 41863777 -211392806 + Alu SINE Alu 242 301 -1 229 232 0 36 chr2 41864742 41864798 -211391785 - L2 LINE L2 -4 3309 3256 899 192 0 6 chr2 41864809 41864965 -211391618 + FRAM SINE Alu 1 154 -22 2932 165 55 2 chr2 41865020 41865564 -211391019 + L1PA16 LINE L1 5585 6157 -9 231 36 0 0 chr2 41866211 41866239 -211390344 + (TG)n Simple_repeat Simple_repeat 1 28 0 1524 180 21 24 chr2 41867295 41867584 -211388999 + AluJb SINE Alu 18 305 -7 308 219 62 10 chr2 41868359 41868455 -211388128 - MIR SINE MIR -2 260 160 198 0 0 0 chr2 41868644 41868666 -211387917 + (A)n Simple_repeat Simple_repeat 1 22 0 461 263 60 8 chr2 41869964 41870097 -211386486 - MIR SINE MIR -118 144 5 198 0 0 0 chr2 41871513 41871535 -211385048 + (TG)n Simple_repeat Simple_repeat 1 22 0 256 250 61 91 chr2 41871812 41871944 -211384639 - MIR3 SINE MIR -23 185 58 1680 178 36 36 chr2 41872335 41872700 -211383883 + MLT1A1 LTR MaLR 1 365 0 268 304 191 9 chr2 41874289 41874404 -211382179 + MIR SINE MIR 16 151 -111 1936 123 0 31 chr2 41876427 41876720 -211379863 - AluSx SINE Alu -28 284 1 300 318 53 41 chr2 41876778 41876948 -211379635 + L1MC4 LINE L1 6536 6707 -1335 236 300 0 0 chr2 41876997 41877087 -211379496 - L1MC4 LINE L1 -1339 6703 6614 230 104 0 42 chr2 41877096 41877144 -211379439 + (TATATG)n Simple_repeat Simple_repeat 3 48 0 332 253 0 32 chr2 41877144 41877239 -211379344 + L1MC4 LINE L1 6612 6703 -1339 301 326 0 0 chr2 41877216 41877305 -211379278 - L1MC4 LINE L1 -1340 6702 6614 * 401 212 0 10 chr2 41877318 41877417 -211379166 + (TA)n Simple_repeat Simple_repeat 1 98 0 2656 131 21 44 chr2 41877417 41877622 -211378961 + L1MA4 LINE L1 5782 5990 -310 2407 77 3 19 chr2 41877622 41877935 -211378648 + AluSq SINE Alu 1 308 -5 2656 131 21 44 chr2 41877935 41878255 -211378328 + L1MA4 LINE L1 5990 6295 -5 223 281 10 21 chr2 41879037 41879133 -211377450 + CT-rich Low_complexity Low_complexity 4 98 0 293 338 77 8 chr2 41879583 41879750 -211376833 + MIR SINE MIR 19 193 -61 360 64 0 0 chr2 41881088 41881135 -211375448 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 22 0 0 0 chr2 41881297 41881319 -211375264 + AT_rich Low_complexity Low_complexity 1 22 0 2033 136 0 7 chr2 41882636 41882945 -211373638 + AluSx SINE Alu 1 307 -5 262 364 68 8 chr2 41883210 41883328 -211373255 - L3 LINE CR1 -16 1561 1437 745 205 90 13 chr2 41883557 41883713 -211372870 - FRAM SINE Alu -11 165 1 225 333 16 78 chr2 41885993 41886045 -211370538 + L2 LINE L2 3139 3193 -79 2367 88 0 0 chr2 41886045 41886339 -211370244 - AluSc SINE Alu -15 294 1 225 333 16 78 chr2 41886339 41886415 -211370168 + L2 LINE L2 3193 3259 -13 251 218 18 0 chr2 41886696 41886751 -211369832 - L2 LINE L2 0 3313 3258 468 302 99 24 chr2 41887179 41887391 -211369192 + MIR SINE MIR 8 235 -27 216 252 96 43 chr2 41887399 41887415 -211369168 - MIR SINE MIR -33 229 215 7574 25 6 0 chr2 41887415 41888934 -211367649 + L1PA4 LINE L1 4625 6152 -3 216 252 96 43 chr2 41888934 41889032 -211367551 - MIR SINE MIR -47 215 109 320 292 25 17 chr2 41889039 41889159 -211367424 + MLT1I LTR MaLR 52 172 -237 450 235 0 10 chr2 41889253 41889355 -211367228 + MLT1I LTR MaLR 303 403 -6 298 264 186 0 chr2 41942954 41943083 -211313500 + L2 LINE L2 3161 3313 0 222 236 95 95 chr2 41943109 41943257 -211313326 - MIR SINE MIR -12 250 103 342 311 25 17 chr2 41943712 41943831 -211312752 + MER5A DNA MER1_type 70 189 0 603 28 0 0 chr2 41945246 41945317 -211311266 - L1PA3 LINE L1 -3 6152 6082 2364 196 34 24 chr2 41945737 41946237 -211310346 - MLT1D LTR MaLR 0 505 1 1004 240 80 90 chr2 41946389 41947151 -211309432 + L2 LINE L2 2555 3313 0 190 250 200 0 chr2 41947149 41947229 -211309354 - L2 LINE L2 -8 3264 3169 * 1783 176 3 6 chr2 41947302 41947615 -211308968 - AluJo SINE Alu 0 312 1 2375 91 0 0 chr2 41948390 41948688 -211307895 - AluSg SINE Alu -12 298 1 1048 98 0 0 chr2 41948707 41948840 -211307743 - AluSp SINE Alu -180 133 1 261 275 7 113 chr2 41951057 41951199 -211305384 + MIR SINE MIR 86 212 -50 337 263 13 155 chr2 41952615 41952707 -211303876 + MIR SINE MIR 63 104 -158 2129 103 7 3 chr2 41952707 41952998 -211303585 + AluSx SINE Alu 2 293 -19 337 263 13 155 chr2 41952998 41953137 -211303446 + MIR SINE MIR 104 261 -1 303 252 36 54 chr2 41953169 41953280 -211303303 - L1MC4 LINE L1 -1321 6721 6613 520 253 137 44 chr2 41953294 41953476 -211303107 - MIR SINE MIR -24 238 40 2215 93 0 0 chr2 41953636 41953963 -211302620 + AluSc SINE Alu 1 327 0 24 77 0 0 chr2 41954279 41954331 -211302252 + AT_rich Low_complexity Low_complexity 1 52 0 198 0 0 0 chr2 41955699 41955721 -211300862 + (A)n Simple_repeat Simple_repeat 1 22 0 413 373 101 29 chr2 41956004 41956320 -211300263 - L2 LINE L2 -18 3254 2916 366 261 17 6 chr2 41959635 41959811 -211296772 + (TA)n Simple_repeat Simple_repeat 1 178 0 300 267 11 11 chr2 41959812 41959902 -211296681 - L1MC4 LINE L1 -1339 6703 6614 287 214 20 0 chr2 41959903 41960063 -211296520 + (TA)n Simple_repeat Simple_repeat 1 163 0 180 97 0 0 chr2 41960089 41960120 -211296463 + (TA)n Simple_repeat Simple_repeat 1 31 0 370 305 175 7 chr2 41960565 41960719 -211295864 - MIR SINE MIR -79 183 4 278 257 48 67 chr2 41961492 41961597 -211294986 + L2 LINE L2 3211 3313 0 342 0 0 0 chr2 41963030 41963068 -211293515 + (TG)n Simple_repeat Simple_repeat 1 38 0 641 219 115 31 chr2 41964009 41964201 -211292382 - MER63A DNA MER1_type -2 208 1 231 36 0 0 chr2 41964282 41964310 -211292273 + (TA)n Simple_repeat Simple_repeat 2 29 0 684 154 15 59 chr2 41964312 41964448 -211292135 - FLAM_C SINE Alu -8 135 6 1951 119 3 35 chr2 41965016 41965310 -211291273 + AluSx SINE Alu 1 286 -26 297 0 0 0 chr2 41965310 41965343 -211291240 + (TTAAA)n Simple_repeat Simple_repeat 3 35 0 1951 119 3 35 chr2 41965343 41965360 -211291223 + AluSx SINE Alu 286 302 -10 231 267 23 79 chr2 41968435 41968622 -211287961 + L2 LINE L2 2856 3029 -273 22 56 0 0 chr2 41968769 41968805 -211287778 + AT_rich Low_complexity Low_complexity 1 36 0 347 240 190 0 chr2 41969580 41969701 -211286882 + L1MC/D LINE L1 5609 5752 -2056 471 298 138 6 chr2 41969725 41969906 -211286677 - MIR SINE MIR -16 246 42 180 111 0 0 chr2 41969997 41970024 -211286559 + (GGGAGA)n Simple_repeat Simple_repeat 2 28 0 1896 152 0 10 chr2 41970553 41970850 -211285733 - AluJo SINE Alu -18 294 1 28 29 0 0 chr2 41972090 41972125 -211284458 + AT_rich Low_complexity Low_complexity 1 35 0 600 345 71 35 chr2 41972131 41972583 -211284000 - L3 LINE CR1 -744 833 366 257 304 74 30 chr2 41972748 41972883 -211283700 + MIR3 SINE MIR 54 194 -14 2007 138 3 10 chr2 41973331 41973627 -211282956 - AluSx SINE Alu -16 296 3 185 286 42 59 chr2 41975470 41975589 -211280994 + MIR3 SINE MIR 88 204 -4 449 370 17 6 chr2 41975666 41975839 -211280744 - MIR SINE MIR -30 232 58 615 284 74 5 chr2 41976606 41976821 -211279762 - MIR SINE MIR -1 261 32 1389 98 0 0 chr2 41976883 41977082 -211279501 + L1PB1 LINE L1 5836 6034 -117 487 139 0 0 chr2 41977082 41977154 -211279429 + AluS SINE Alu 1 72 -241 2418 101 0 25 chr2 41977195 41977319 -211279264 - L1PB1 LINE L1 -1 6150 6024 1837 148 28 0 chr2 41977319 41977479 -211279104 - AluSx SINE Alu -21 291 118 387 0 0 0 chr2 41977479 41977522 -211279061 + (TG)n Simple_repeat Simple_repeat 2 44 0 1837 148 28 0 chr2 41977522 41977644 -211278939 - AluSx SINE Alu -194 118 1 2418 101 0 25 chr2 41977644 41977885 -211278698 - L1PB1 LINE L1 -127 6024 5794 261 0 0 0 chr2 41977885 41977914 -211278669 + (TG)n Simple_repeat Simple_repeat 2 30 0 318 226 0 43 chr2 41977953 41978046 -211278537 - L1MC4 LINE L1 -1340 6702 6614 1843 107 11 0 chr2 41978052 41978323 -211278260 - L1P5 LINE L1 -360 5791 5518 349 58 2 0 chr2 41978322 41978371 -211278212 + L1P5 LINE L1 5426 5469 -682 * 634 205 160 0 chr2 41980402 41980558 -211276025 - MER5A DNA MER1_type 0 189 9 739 221 55 0 chr2 41980729 41980892 -211275691 - MER20 DNA MER1_type -6 213 42 2313 168 58 18 chr2 41982446 41982594 -211273989 + L1MB2 LINE L1 5644 5785 -386 360 43 0 0 chr2 41982594 41982640 -211273943 + (CA)n Simple_repeat Simple_repeat 2 47 0 2313 168 58 18 chr2 41982640 41982991 -211273592 + L1MB2 LINE L1 5785 6163 -8 259 143 52 39 chr2 41983425 41983502 -211273081 + A-rich Low_complexity Low_complexity 2 79 0 196 286 20 0 chr2 41984275 41984324 -211272259 + L3b LINE CR1 1429 1478 -105 2230 116 3 0 chr2 41984944 41985247 -211271336 - AluSg SINE Alu -2 308 5 1688 151 62 3 chr2 41985260 41985584 -211270999 - L1MB7 LINE L1 -16 6168 5826 329 311 30 15 chr2 41986033 41986165 -211270418 - MIR3 SINE MIR -3 205 72 34 0 0 0 chr2 41986821 41986855 -211269728 + AT_rich Low_complexity Low_complexity 1 34 0 323 246 22 78 chr2 41987033 41987212 -211269371 + L1ME4a LINE L1 5947 6115 -6 209 291 73 0 chr2 41987784 41987839 -211268744 - MER91C DNA MER1_type -35 105 47 21 0 0 0 chr2 41987986 41988007 -211268576 + AT_rich Low_complexity Low_complexity 1 21 0 285 168 30 69 chr2 41988306 41988407 -211268176 - L1MA10 LINE L1 -2 6332 6236 288 250 42 0 chr2 41988466 41988491 -211268092 - L1MA10 LINE L1 -81 6253 6229 4320 233 79 34 chr2 41988491 41989022 -211267561 - L1ME1 LINE L1 -100 6066 5560 811 143 0 16 chr2 41989022 41989148 -211267435 - FLAM_C SINE Alu -7 126 3 4320 233 79 34 chr2 41989148 41990733 -211265850 - L1ME1 LINE L1 -606 5560 3859 201 286 181 30 chr2 41992330 41992463 -211264120 + L2 LINE L2 3087 3239 -74 303 313 38 44 chr2 41993641 41993801 -211262782 - MER5A DNA MER1_type 0 189 31 379 332 133 5 chr2 41993834 41994045 -211262538 - MIR SINE MIR -23 239 2 607 301 97 65 chr2 41995069 41995441 -211261142 - L3 LINE CR1 -175 1402 1019 216 135 0 0 chr2 41995536 41995573 -211261010 + (CAT)n Simple_repeat Simple_repeat 3 39 0 2782 91 11 3 chr2 41996918 41997290 -211259293 - THE1C LTR MaLR 0 375 1 1505 176 3 62 chr2 41997823 41998160 -211258423 + AluJo SINE Alu 1 319 0 328 20 41 0 chr2 41998269 41998318 -211258265 + (CA)n Simple_repeat Simple_repeat 2 52 0 219 211 127 14 chr2 41998322 41998393 -211258190 - MIR SINE MIR -70 192 114 23 0 0 0 chr2 41998454 41998477 -211258106 + AT_rich Low_complexity Low_complexity 1 23 0 329 275 69 46 chr2 41999422 41999553 -211257030 + MER94 DNA DNA 1 134 0 216 161 48 0 chr2 42000094 42000156 -211256427 + CT-rich Low_complexity Low_complexity 3 67 0 1109 84 42 110 chr2 42001107 42001298 -211255285 + AluY SINE Alu 1 178 -133 25 0 0 0 chr2 42002539 42002564 -211254019 + AT_rich Low_complexity Low_complexity 1 25 0 408 275 118 22 chr2 42002676 42002905 -211253678 - L1ME LINE L1 -297 5824 5574 2432 93 39 3 chr2 42003006 42003361 -211253222 + L1PA16 LINE L1 5790 6157 -9 288 358 169 26 chr2 42003672 42004501 -211252082 + L2 LINE L2 1907 2853 -461 384 22 0 0 chr2 42004508 42004553 -211252030 + (CA)n Simple_repeat Simple_repeat 1 45 0 24 32 0 0 chr2 42005536 42005567 -211251016 + AT_rich Low_complexity Low_complexity 1 31 0 360 270 25 69 chr2 42006539 42006698 -211249885 + MIR SINE MIR 111 262 0 2187 71 14 11 chr2 42007020 42007340 -211249243 - AluSx SINE Alu 0 321 1 698 187 8 15 chr2 42007427 42007561 -211249022 - FRAM SINE Alu -43 133 1 2442 84 0 0 chr2 42008604 42008915 -211247668 + AluY SINE Alu 1 311 0 2000 133 10 0 chr2 42009215 42009517 -211247066 + AluSq SINE Alu 1 305 -8 296 271 65 37 chr2 42009573 42009680 -211246903 - MIR3 SINE MIR -5 203 94 21 0 0 0 chr2 42010242 42010263 -211246320 + AT_rich Low_complexity Low_complexity 1 21 0 501 259 105 6 chr2 42012238 42012400 -211244183 + MIR SINE MIR 15 192 -70 319 111 16 16 chr2 42013519 42013582 -211243001 + (TC)n Simple_repeat Simple_repeat 2 64 0 254 288 0 0 chr2 42013778 42013837 -211242746 + (TG)n Simple_repeat Simple_repeat 1 59 0 268 211 132 13 chr2 42015379 42015455 -211241128 + MER103 DNA DNA 30 114 -52 2205 118 0 0 chr2 42015726 42016022 -211240561 + AluSx SINE Alu 1 296 -16 198 103 0 0 chr2 42016745 42016774 -211239809 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 243 314 48 19 chr2 42017053 42017158 -211239425 + MIR SINE MIR 86 193 -69 1130 215 63 70 chr2 42017420 42017848 -211238735 + LTR37B LTR ERV1 38 462 -6 229 341 133 0 chr2 42018410 42018545 -211238038 + MIR3 SINE MIR 43 195 -13 266 277 0 30 chr2 42018613 42018714 -211237869 - MER103 DNA DNA -66 100 3 228 271 14 0 chr2 42018907 42018977 -211237606 - MIR SINE MIR -5 257 187 2824 65 0 3 chr2 42021101 42021473 -211235110 + L1PA8 LINE L1 5802 6172 0 321 89 0 0 chr2 42021495 42021540 -211235043 + (A)n Simple_repeat Simple_repeat 1 45 0 378 257 18 18 chr2 42021816 42021925 -211234658 + MER5A DNA MER1_type 41 149 -40 21 0 0 0 chr2 42022394 42022415 -211234168 + AT_rich Low_complexity Low_complexity 1 21 0 255 258 91 0 chr2 42022547 42022613 -211233970 + MIR SINE MIR 45 116 -146 578 233 8 8 chr2 42022616 42022745 -211233838 - FRAM SINE Alu -46 130 2 469 313 57 23 chr2 42022877 42023053 -211233530 + MIR SINE MIR 21 202 -60 393 322 66 22 chr2 42023598 42023781 -211232802 + MIR3 SINE MIR 3 193 -15 854 269 28 5 chr2 42024905 42025117 -211231466 + MIR SINE MIR 34 250 -12 1649 186 3 10 chr2 42025647 42025938 -211230645 + AluJo SINE Alu 1 289 -23 297 0 0 0 chr2 42026035 42026068 -211230515 + (A)n Simple_repeat Simple_repeat 1 33 0 672 322 42 4 chr2 42026228 42026464 -211230119 - MIR SINE MIR -12 250 6 206 345 95 26 chr2 42027972 42028088 -211228495 + L3b LINE CR1 1427 1550 -33 968 272 78 12 chr2 42029434 42029765 -211226818 - L1MC/D LINE L1 -2097 5711 5359 312 289 0 0 chr2 42030473 42030563 -211226020 + MER103 DNA DNA 2 91 -75 205 191 21 0 chr2 42030747 42030794 -211225789 + MIR SINE MIR 98 145 -117 309 285 136 76 chr2 42031471 42031787 -211224796 + L2 LINE L2 2938 3272 0 1814 138 17 34 chr2 42032669 42032965 -211223618 + AluJo SINE Alu 13 303 -9 844 93 0 23 chr2 42033019 42033148 -211223435 + L1PA7 LINE L1 6026 6151 -3 207 0 0 0 chr2 42033496 42033519 -211223064 + (A)n Simple_repeat Simple_repeat 1 23 0 218 156 22 0 chr2 42033591 42033636 -211222947 + (TTCA)n Simple_repeat Simple_repeat 1 46 0 185 136 0 23 chr2 42034080 42034124 -211222459 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 1201 170 90 7 chr2 42034566 42034843 -211221740 + MER33 DNA MER1_type 25 324 0 226 357 195 11 chr2 42034853 42035125 -211221458 - L2 LINE L2 -503 2811 2490 404 244 134 24 chr2 42035465 42035592 -211220991 - MIR SINE MIR -10 252 112 366 327 10 10 chr2 42035595 42035696 -211220887 + L2 LINE L2 3153 3253 -19 743 217 74 93 chr2 42035935 42036193 -211220390 - MIR SINE MIR 0 262 10 2145 114 20 0 chr2 42037336 42037642 -211218941 - AluSx SINE Alu 0 312 1 1111 312 39 31 chr2 42038035 42038525 -211218058 - MER20B DNA MER1_type -287 496 3 216 0 0 0 chr2 42038785 42038809 -211217774 + (ATG)n Simple_repeat Simple_repeat 2 25 0 180 0 0 0 chr2 42039346 42039366 -211217217 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 207 69 0 0 chr2 42039798 42039827 -211216756 + (TG)n Simple_repeat Simple_repeat 2 30 0 1449 219 21 3 chr2 42041166 42041454 -211215129 + AluJo SINE Alu 1 293 -19 464 246 115 8 chr2 42041555 42041685 -211214898 + MIR SINE MIR 109 252 -10 195 274 251 74 chr2 42041794 42041969 -211214614 + MIR SINE MIR 56 261 -1 * 367 273 29 46 chr2 42041952 42042158 -211214425 - MIR SINE MIR -49 213 16 1933 314 77 18 chr2 42043068 42043990 -211212593 - L3 LINE CR1 -420 1157 182 1022 82 129 12 chr2 42044052 42044223 -211212360 - L1PA13 LINE L1 -19 6144 5954 2672 184 4 0 chr2 42044223 42044733 -211211850 + L1P LINE L1 4728 5239 -907 248 200 100 44 chr2 42046207 42046297 -211210286 - MIR SINE MIR -50 212 118 390 317 0 28 chr2 42046935 42047080 -211209503 + MIR SINE MIR 119 259 -3 395 356 29 0 chr2 42048963 42049137 -211207446 - MIR SINE MIR -7 255 77 650 188 0 0 chr2 42049677 42049794 -211206789 + FLAM_C SINE Alu 1 117 -26 22 0 0 0 chr2 42049795 42049817 -211206766 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr2 42049817 42049839 -211206744 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 187 397 43 9 chr2 42050002 42050118 -211206465 - L2 LINE L2 -641 2673 2554 1619 196 7 0 chr2 42051168 42051472 -211205111 + AluJo SINE Alu 1 306 0 238 80 40 40 chr2 42052014 42052064 -211204519 + GA-rich Low_complexity Low_complexity 2 51 0 1826 223 152 49 chr2 42052355 42052948 -211203635 + MLT1E1 LTR MaLR 1 654 0 1158 273 128 36 chr2 42053463 42054003 -211202580 - L2 LINE L2 0 3313 2723 766 279 78 41 chr2 42054183 42054570 -211202013 + L2 LINE L2 2910 3310 -3 683 267 40 0 chr2 42054602 42054752 -211201831 - MER5A DNA MER1_type -33 156 1 225 309 32 63 chr2 42055582 42055708 -211200875 - MIR SINE MIR -78 184 63 182 152 0 0 chr2 42056677 42056710 -211199873 + L2 LINE L2 3018 3050 -222 3340 112 12 2 chr2 42057060 42057552 -211199031 + LOR1a LTR ERV1 1 497 0 22 0 0 0 chr2 42058266 42058288 -211198295 + AT_rich Low_complexity Low_complexity 1 22 0 188 267 167 83 chr2 42058928 42059108 -211197475 - MIR SINE MIR 0 262 68 1318 196 55 41 chr2 42059426 42059717 -211196866 + AluJo SINE Alu 1 295 -17 23 0 0 0 chr2 42060101 42060124 -211196459 + AT_rich Low_complexity Low_complexity 1 23 0 249 286 94 37 chr2 42061122 42061367 -211195216 + L1ME4a LINE L1 5561 5819 -302 364 319 84 11 chr2 42061569 42061760 -211194823 + L1ME4a LINE L1 5902 6106 -15 21 36 0 0 chr2 42062056 42062084 -211194499 + AT_rich Low_complexity Low_complexity 1 28 0 2046 137 3 0 chr2 42063111 42063410 -211193173 + AluSx SINE Alu 9 308 -4 246 336 9 0 chr2 42064453 42064563 -211192020 + (TA)n Simple_repeat Simple_repeat 2 112 0 218 0 0 87 chr2 42065254 42065300 -211191283 + (TA)n Simple_repeat Simple_repeat 2 43 0 222 37 0 0 chr2 42065377 42065404 -211191179 + (CA)n Simple_repeat Simple_repeat 2 28 0 292 255 20 20 chr2 42065430 42065528 -211191055 - L1ME LINE L1 -254 5867 5770 767 257 16 0 chr2 42065893 42066076 -211190507 + MER5A DNA MER1_type 2 187 -2 219 188 0 0 chr2 42066590 42066638 -211189945 + (TA)n Simple_repeat Simple_repeat 2 49 0 495 218 12 8 chr2 42067478 42067727 -211188856 + GA-rich Low_complexity Low_complexity 1 250 0 896 186 69 20 chr2 42069406 42069610 -211186973 + MER20 DNA MER1_type 1 214 -5 230 56 28 0 chr2 42069890 42069926 -211186657 + (TG)n Simple_repeat Simple_repeat 1 37 0 229 242 45 0 chr2 42071098 42071164 -211185419 - HAL1b LINE L1 -276 1072 1004 21 0 0 0 chr2 42071588 42071609 -211184974 + AT_rich Low_complexity Low_complexity 1 21 0 261 0 0 0 chr2 42072196 42072225 -211184358 + (A)n Simple_repeat Simple_repeat 1 29 0 289 308 26 0 chr2 42072554 42072632 -211183951 + MIR SINE MIR 168 247 -15 207 304 0 51 chr2 42073055 42073134 -211183449 + MER5B DNA MER1_type 7 81 -97 21 0 0 0 chr2 42074025 42074046 -211182537 + AT_rich Low_complexity Low_complexity 1 21 0 237 203 68 0 chr2 42074182 42074241 -211182342 - L1ME LINE L1 -2042 5766 5704 1917 181 68 32 chr2 42075269 42075711 -211180872 + LTR2B LTR ERV1 32 489 -1 211 341 12 0 chr2 42076717 42076799 -211179784 + L2 LINE L2 2892 2974 -298 261 83 0 0 chr2 42077015 42077051 -211179532 + (A)n Simple_repeat Simple_repeat 1 36 0 3641 125 58 3 chr2 42077417 42078019 -211178564 + MER41B LTR ERV1 1 635 0 672 183 16 8 chr2 42079516 42079642 -211176941 - FLAM_C SINE Alu -6 127 1 21 0 0 0 chr2 42081833 42081854 -211174729 + AT_rich Low_complexity Low_complexity 1 21 0 289 222 38 162 chr2 42082422 42082531 -211174052 + MIR3 SINE MIR 17 95 -113 1970 128 3 0 chr2 42082531 42082813 -211173770 - AluSx SINE Alu -29 283 1 289 222 38 162 chr2 42082813 42082888 -211173695 + MIR3 SINE MIR 95 178 -30 193 314 157 0 chr2 42083145 42083215 -211173368 + L2 LINE L2 3184 3264 -8 36 62 0 0 chr2 42085982 42086046 -211170537 + AT_rich Low_complexity Low_complexity 1 64 0 488 138 85 0 chr2 42086054 42086148 -211170435 - L1MA8 LINE L1 -42 6249 6148 214 316 132 23 chr2 42086242 42086416 -211170167 - MIR SINE MIR -50 212 20 229 273 18 0 chr2 42086596 42086651 -211169932 - MARNA DNA Mariner -395 191 136 187 286 0 0 chr2 42086706 42086748 -211169835 + L2 LINE L2 3215 3256 -16 263 291 15 45 chr2 42086882 42087016 -211169567 + L1ME LINE L1 5588 5717 -404 356 329 36 16 chr2 42087346 42087598 -211168985 - MIR SINE MIR -3 259 3 1238 61 18 0 chr2 42088353 42088516 -211168067 - L1PA4 LINE L1 -4 6151 5986 3586 17 0 2 chr2 42088516 42088926 -211167657 + L1PA4 LINE L1 5459 5867 -288 228 336 48 10 chr2 42089879 42089983 -211166600 - L3 LINE CR1 -627 950 843 1597 94 49 130 chr2 42091163 42091307 -211165276 + AluSx SINE Alu 21 128 -184 477 0 0 0 chr2 42091307 42091360 -211165223 + (CA)n Simple_repeat Simple_repeat 2 54 0 1597 94 49 130 chr2 42091360 42091523 -211165060 + AluSx SINE Alu 128 303 -9 456 187 0 0 chr2 42091606 42091681 -211164902 - MER94 DNA DNA -59 75 1 444 127 25 13 chr2 42092247 42092326 -211164257 - MADE1 DNA Mariner 0 80 1 954 103 7 19 chr2 42092608 42092763 -211163820 - L1PA15 LINE L1 -2 6163 6011 1042 159 0 0 chr2 42092947 42093110 -211163473 - AluJb SINE Alu -3 309 147 229 348 0 14 chr2 42093110 42093179 -211163404 - MIR SINE MIR -188 74 7 225 0 0 0 chr2 42093318 42093343 -211163240 + (CA)n Simple_repeat Simple_repeat 2 26 0 265 414 29 0 chr2 42094504 42094644 -211161939 + L2 LINE L2 3129 3272 0 443 295 7 0 chr2 42094891 42095030 -211161553 + CT-rich Low_complexity Low_complexity 1 140 0 528 238 63 0 chr2 42096324 42096450 -211160133 + MIR SINE MIR 56 189 -73 428 237 0 6 chr2 42096503 42096672 -211159911 + (CCA)n Simple_repeat Simple_repeat 1 168 0 280 285 66 16 chr2 42096708 42096853 -211159730 - MIR SINE MIR -55 153 2 323 295 230 7 chr2 42098298 42098437 -211158146 + MIR SINE MIR 50 219 -43 26 50 0 0 chr2 42100733 42100773 -211155810 + AT_rich Low_complexity Low_complexity 1 40 0 1027 47 0 0 chr2 42101295 42101422 -211155161 + L1P4 LINE L1 5614 5740 -428 222 118 0 0 chr2 42102938 42102972 -211153611 + (TCCC)n Simple_repeat Simple_repeat 1 34 0 270 0 0 0 chr2 42103871 42103901 -211152682 + (CA)n Simple_repeat Simple_repeat 1 30 0 1037 262 97 44 chr2 42107618 42107849 -211148734 - L2 LINE L2 0 3313 3096 246 81 0 0 chr2 42107849 42107886 -211148697 + (TG)n Simple_repeat Simple_repeat 2 38 0 1037 262 97 44 chr2 42107886 42108300 -211148283 - L2 LINE L2 -217 3096 2632 330 276 59 46 chr2 42108551 42108703 -211147880 + L2 LINE L2 2664 2817 -497 230 204 93 0 chr2 42108988 42109042 -211147541 - MER91C DNA MER1_type -53 87 29 410 303 45 0 chr2 42109044 42109176 -211147407 - MIR SINE MIR -78 184 47 595 236 22 87 chr2 42111184 42111222 -211145361 + L2 LINE L2 3099 3138 -175 1718 136 61 41 chr2 42111222 42111517 -211145066 - AluSq SINE Alu -12 301 1 595 236 22 87 chr2 42111517 42111707 -211144876 + L2 LINE L2 3138 3312 -1 518 276 84 42 chr2 42112400 42112614 -211143969 - MIR SINE MIR 0 262 40 340 323 62 31 chr2 42113880 42114010 -211142573 - L2 LINE L2 -1 3271 3138 418 289 108 6 chr2 42114144 42114310 -211142273 - MER5A DNA MER1_type 0 189 7 402 351 38 0 chr2 42115920 42116051 -211140532 - L2 LINE L2 0 3272 3137 8156 112 20 8 chr2 42116080 42117414 -211139169 + L1PA8 LINE L1 3841 5190 -956 655 76 0 42 chr2 42117413 42117492 -211139091 - L1P4 LINE L1 -377 5778 5713 * 1390 36 0 0 chr2 42117492 42117657 -211138926 + L1PA3 LINE L1 5988 6152 -3 655 76 0 42 chr2 42117657 42117706 -211138877 - L1P4 LINE L1 -442 5713 5664 6314 95 4 8 chr2 42117727 42118725 -211137858 + L1PA8 LINE L1 5172 6165 -7 346 315 102 8 chr2 42119120 42119247 -211137336 + MIR3 SINE MIR 27 165 -43 234 320 23 81 chr2 42119475 42119502 -211137081 - MIR3 SINE MIR -26 182 155 1778 164 10 23 chr2 42119502 42119806 -211136777 + AluJo SINE Alu 1 300 -12 234 320 23 81 chr2 42119806 42119950 -211136633 - MIR3 SINE MIR -53 155 21 1081 261 56 0 chr2 42120035 42120341 -211136242 + MER58B DNA MER1_type 1 323 -18 503 275 34 17 chr2 42120488 42120666 -211135917 - MIR SINE MIR 0 262 82 183 42 0 0 chr2 42171200 42171224 -211085359 + (TG)n Simple_repeat Simple_repeat 1 24 0 397 0 19 19 chr2 42172579 42172633 -211083950 + (CA)n Simple_repeat Simple_repeat 1 54 0 212 273 20 10 chr2 42172917 42173016 -211083567 + G-rich Low_complexity Low_complexity 5 104 0 * 249 245 29 20 chr2 42173001 42173103 -211083480 + (CCCG)n Simple_repeat Simple_repeat 3 105 0 21 36 0 0 chr2 42173103 42173131 -211083452 + GC_rich Low_complexity Low_complexity 1 28 0 183 352 63 44 chr2 42173972 42174131 -211082452 - MER5A DNA MER1_type 0 189 28 757 225 0 22 chr2 42174369 42174551 -211082032 + MER5B DNA MER1_type 1 178 0 192 322 144 0 chr2 42174605 42174695 -211081888 - MER5A DNA MER1_type -77 112 10 2664 45 0 3 chr2 42176882 42177191 -211079392 + AluY SINE Alu 1 308 -3 657 271 96 25 chr2 42177342 42177582 -211079001 + MIR SINE MIR 6 262 0 182 247 21 118 chr2 42178677 42178770 -211077813 - MIR SINE MIR -73 189 106 525 301 0 35 chr2 42178775 42178948 -211077635 - MER5B DNA MER1_type -11 167 1 187 252 0 0 chr2 42178948 42178985 -211077598 - MIR SINE MIR -111 97 60 684 277 47 35 chr2 42179870 42180126 -211076457 - L2 LINE L2 -4 3309 3051 2115 100 30 13 chr2 42181421 42181720 -211074863 - AluSx SINE Alu -8 304 1 555 236 93 12 chr2 42182111 42182272 -211074311 - MER97b DNA MER1_type? -874 179 6 2327 118 0 0 chr2 42182849 42183154 -211073429 - AluSx SINE Alu -7 305 1 29 101 0 0 chr2 42183166 42183265 -211073318 + AT_rich Low_complexity Low_complexity 1 99 0 1674 180 7 0 chr2 42183374 42183652 -211072931 + AluJo SINE Alu 1 280 -32 263 0 81 0 chr2 42183652 42183689 -211072894 + A-rich Low_complexity Low_complexity 1 40 0 195 345 179 20 chr2 42183784 42184187 -211072396 - L2 LINE L2 0 3313 2847 561 30 0 0 chr2 42184669 42184736 -211071847 + (CA)n Simple_repeat Simple_repeat 2 68 0 2035 136 0 0 chr2 42184762 42185042 -211071541 - AluSx SINE Alu -32 280 1 261 125 25 0 chr2 42185067 42185107 -211071476 - MER57A LTR ERV1 -68 335 295 1672 253 137 9 chr2 42185930 42186559 -211070024 + MER20B DNA MER1_type 6 714 -69 1452 195 55 65 chr2 42186591 42186991 -211069592 + MSTD LTR MaLR 1 396 0 224 269 167 0 chr2 42187353 42187431 -211069152 + MIR SINE MIR 57 147 -61 347 325 8 26 chr2 42188789 42188906 -211067677 + MIR3 SINE MIR 84 198 -10 365 289 21 7 chr2 42189491 42189633 -211066950 - L1MC5 LINE L1 -51 7910 7767 702 199 0 34 chr2 42189642 42189788 -211066795 + FLAM_A SINE Alu 1 141 -1 366 221 57 29 chr2 42189794 42189934 -211066649 - L1MC5 LINE L1 -189 7772 7629 1542 174 191 6 chr2 42190040 42190401 -211066182 + MSTA LTR MaLR 1 428 0 288 221 37 131 chr2 42190436 42190901 -211065682 - L1MC5 LINE L1 -471 7490 7070 292 263 88 81 chr2 42191095 42191604 -211064979 + L1ME4a LINE L1 5544 6056 -65 30 27 0 0 chr2 42191638 42191675 -211064908 + AT_rich Low_complexity Low_complexity 1 37 0 211 250 250 54 chr2 42192009 42192157 -211064426 - MIR SINE MIR -73 189 13 592 233 8 31 chr2 42193386 42193515 -211063068 - FLAM_C SINE Alu -7 126 1 318 310 40 0 chr2 42193515 42193615 -211062968 - L2 LINE L2 -14 3299 3196 279 357 202 6 chr2 42193973 42194141 -211062442 + L3 LINE CR1 1119 1319 -258 464 301 99 34 chr2 42194176 42194468 -211062115 + L2 LINE L2 3003 3313 0 216 368 103 0 chr2 42194620 42194756 -211061827 - L3 LINE CR1 -111 1466 1317 424 287 23 0 chr2 42195471 42195600 -211060983 - MIR SINE MIR -31 231 100 2373 56 0 0 chr2 42195970 42196280 -211060303 - AluY SINE Alu 0 310 1 618 163 18 24 chr2 42196282 42196448 -211060135 - Charlie1 DNA MER1_type -44 2717 2553 294 163 43 22 chr2 42196451 42196543 -211060040 + (CATATA)n Simple_repeat Simple_repeat 2 95 0 498 316 90 35 chr2 42197249 42197691 -211058892 - L2 LINE L2 -123 3190 2722 189 308 0 0 chr2 42198197 42198249 -211058334 + MIR SINE MIR 93 144 -64 226 181 14 14 chr2 42198546 42198618 -211057965 + (TG)n Simple_repeat Simple_repeat 2 73 0 2489 79 0 0 chr2 42199614 42199919 -211056664 - AluSq SINE Alu -8 305 1 1589 206 39 11 chr2 42201095 42201450 -211055133 + MLT1A1 LTR MaLR 1 365 0 183 167 0 0 chr2 42201953 42201995 -211054588 + (TG)n Simple_repeat Simple_repeat 1 42 0 426 322 58 40 chr2 42202175 42202349 -211054234 + MIR SINE MIR 8 184 -78 302 336 43 9 chr2 42202798 42202914 -211053669 - MER5A DNA MER1_type -9 180 61 474 182 0 0 chr2 42202926 42203014 -211053569 - L1MB1 LINE L1 -1 6167 6080 270 203 31 0 chr2 42203168 42203232 -211053351 - MER69 DNA AcHobo 0 2526 2461 493 231 25 0 chr2 42203238 42203359 -211053224 - MER69 DNA AcHobo -2377 149 26 703 207 15 7 chr2 42203399 42203534 -211053049 - MIR SINE MIR -107 155 20 2388 48 0 45 chr2 42203637 42203951 -211052632 - AluY SINE Alu -11 300 1 32 95 0 0 chr2 42204056 42204151 -211052432 + AT_rich Low_complexity Low_complexity 1 95 0 1087 245 141 43 chr2 42204390 42204851 -211051732 + MLT1J LTR MaLR 6 511 0 186 266 16 62 chr2 42205328 42205392 -211051191 + L2 LINE L2 3025 3085 -228 2305 105 55 19 chr2 42206793 42207155 -211049428 + THE1C LTR MaLR 1 375 0 1366 31 0 0 chr2 42207570 42207732 -211048851 - L1PA5 LINE L1 0 6154 5993 1113 86 0 0 chr2 42207732 42207884 -211048699 + L1PA5 LINE L1 5836 5987 -167 210 143 0 0 chr2 42209300 42209335 -211047248 + (TG)n Simple_repeat Simple_repeat 2 36 0 423 310 49 40 chr2 42209869 42210095 -211046488 - MIR SINE MIR -1 261 34 205 200 40 40 chr2 42211945 42211995 -211044588 - L3 LINE CR1 -13 1564 1515 5517 28 8 0 chr2 42212015 42212668 -211043915 - L1PA3 LINE L1 -1677 4469 3812 * 7676 32 1 0 chr2 42212665 42214369 -211042214 + L1PA3 LINE L1 4464 6167 0 1167 119 0 0 chr2 42214498 42214658 -211041925 - AluSg/x SINE Alu -8 304 145 272 137 20 0 chr2 42214738 42214789 -211041794 + CT-rich Low_complexity Low_complexity 3 54 0 210 37 0 0 chr2 42214963 42214990 -211041593 + (TAA)n Simple_repeat Simple_repeat 1 27 0 1838 28 0 0 chr2 42215210 42215428 -211041155 - L1P1 LINE L1 -360 5795 5578 514 48 0 0 chr2 42215428 42215488 -211041095 + L1PA5 LINE L1 6077 6139 -15 396 0 0 0 chr2 42215488 42215532 -211041051 + (TA)n Simple_repeat Simple_repeat 2 45 0 244 271 39 70 chr2 42215714 42215843 -211040740 - MIR SINE MIR -34 228 104 240 340 85 14 chr2 42216518 42216659 -211039924 - MIR3 SINE MIR -41 167 17 225 130 22 22 chr2 42216796 42216842 -211039741 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 2557 7 0 0 chr2 42217643 42217932 -211038651 + L1PA2 LINE L1 5864 6152 -3 351 331 47 16 chr2 42218141 42218268 -211038315 - L2 LINE L2 -8 3305 3175 402 344 125 47 chr2 42218428 42219083 -211037500 - L2 LINE L2 -337 2977 2272 546 319 171 36 chr2 42219213 42219740 -211036843 + L3 LINE CR1 256 853 -724 200 356 94 59 chr2 42219811 42220013 -211036570 + L3 LINE CR1 1116 1324 -253 894 233 85 5 chr2 42220070 42220293 -211036290 + MIR SINE MIR 1 241 -21 261 219 0 0 chr2 42220906 42220970 -211035613 + L1MA9 LINE L1 6226 6289 -23 198 0 0 0 chr2 42220977 42220999 -211035584 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 278 238 30 30 chr2 42221187 42221288 -211035295 - MER103 DNA DNA -3 163 63 408 300 0 0 chr2 42221481 42221611 -211034972 - MER94 DNA DNA 0 134 5 261 0 0 0 chr2 42221643 42221672 -211034911 + (T)n Simple_repeat Simple_repeat 1 29 0 578 316 132 9 chr2 42221674 42222094 -211034489 + L2 LINE L2 2650 3120 -193 285 305 95 11 chr2 42223244 42223339 -211033244 + L2 LINE L2 3168 3270 -2 222 263 138 0 chr2 42223337 42223417 -211033166 - MIR SINE MIR 0 262 172 * 675 251 65 11 chr2 42223774 42223993 -211032590 + L1ME3A LINE L1 5928 6164 -6 6532 155 8 6 chr2 42224271 42225971 -211030612 + L1MA1 LINE L1 4106 5809 -493 2409 86 37 0 chr2 42225981 42226331 -211030252 + L1MA1 LINE L1 5933 6295 -7 23 54 0 0 chr2 42226332 42226369 -211030214 + AT_rich Low_complexity Low_complexity 1 37 0 263 230 16 111 chr2 42226853 42226979 -211029604 + MER103 DNA DNA 51 164 -2 730 261 64 5 chr2 42228482 42228670 -211027913 + MIR SINE MIR 53 251 -11 259 326 67 11 chr2 42228681 42228770 -211027813 - MIR SINE MIR -155 107 14 423 274 163 20 chr2 42229681 42229834 -211026749 - MER5B DNA MER1_type -1 177 3 234 0 0 0 chr2 42230285 42230311 -211026272 + (T)n Simple_repeat Simple_repeat 1 26 0 2053 86 0 57 chr2 42230659 42230973 -211025610 - AluSc SINE Alu -13 296 1 23 0 0 0 chr2 42230982 42231005 -211025578 + AT_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr2 42233528 42233548 -211023035 + (T)n Simple_repeat Simple_repeat 1 20 0 224 222 0 0 chr2 42233748 42233793 -211022790 + (TGAA)n Simple_repeat Simple_repeat 3 47 0 22 0 0 0 chr2 42234010 42234032 -211022551 + AT_rich Low_complexity Low_complexity 1 22 0 331 274 98 0 chr2 42234445 42234598 -211021985 + L1MC5 LINE L1 7759 7926 -35 380 317 57 63 chr2 42235015 42235349 -211021234 + MLT1L LTR MaLR 211 542 -73 220 355 13 0 chr2 42235382 42235458 -211021125 + MIR SINE MIR 26 102 -160 229 139 0 0 chr2 42235920 42235956 -211020627 - tRNA-Gly-GGA tRNA tRNA -39 36 1 345 339 40 24 chr2 42236418 42236542 -211020041 + L2 LINE L2 3147 3272 0 7393 208 29 43 chr2 42237251 42239960 -211016623 - L1MB8 LINE L1 -289 5889 3226 638 243 44 106 chr2 42239985 42240652 -211015931 - L1M4 LINE L1 -3736 3221 2610 1149 248 86 10 chr2 42240693 42241471 -211015112 - L1M4 LINE L1 -4442 2696 1603 2002 311 72 27 chr2 42241479 42242372 -211014211 - L1M4 LINE L1 -5916 943 11 209 343 30 0 chr2 42242615 42242682 -211013901 - MIR SINE MIR -68 140 72 1585 196 6 13 chr2 42243187 42243553 -211013030 + L1PB4 LINE L1 5847 6210 0 2117 209 107 5 chr2 42243807 42244587 -211011996 - L1MC/D LINE L1 -427 6209 5360 673 289 15 8 chr2 42244589 42244849 -211011734 - L1MC/D LINE L1 -2488 4052 3791 8628 228 73 32 chr2 42244856 42247706 -211008877 - L1MDa LINE L1 -3519 3021 16 2092 97 0 62 chr2 42247969 42248278 -211008305 + AluSg SINE Alu 1 290 -20 720 212 0 0 chr2 42248359 42248491 -211008092 + FLAM_A SINE Alu 1 132 -1 44 46 0 0 chr2 42248652 42248717 -211007866 + AT_rich Low_complexity Low_complexity 1 65 0 261 325 103 57 chr2 42249024 42249461 -211007122 + L2 LINE L2 2155 2611 -703 3268 74 2 2 chr2 42249717 42250221 -211006362 - L1PA7 LINE L1 -468 5686 5183 3280 73 0 13 chr2 42250221 42250652 -211005931 + L1PA7 LINE L1 5710 6153 -1 236 250 0 0 chr2 42251048 42251096 -211005487 + GA-rich Low_complexity Low_complexity 4 51 0 286 250 210 20 chr2 42251104 42251204 -211005379 + MER5B DNA MER1_type 60 178 0 229 216 0 0 chr2 42252363 42252414 -211004169 - L1M4 LINE L1 -917 5229 5179 440 327 122 42 chr2 42252491 42252827 -211003756 - L2 LINE L2 -528 2786 2424 231 36 0 0 chr2 42252827 42252855 -211003728 + (CAATA)n Simple_repeat Simple_repeat 2 29 0 1668 115 0 8 chr2 42252887 42253122 -211003461 - AluSg SINE Alu -75 235 3 23 0 0 0 chr2 42253133 42253156 -211003427 + AT_rich Low_complexity Low_complexity 1 23 0 197 295 66 57 chr2 42253350 42253472 -211003111 - L2 LINE L2 -309 2963 2841 910 169 82 68 chr2 42258467 42258674 -210997909 - AluJb SINE Alu -16 296 87 260 272 26 92 chr2 42259035 42259171 -210997412 - MIR SINE MIR -75 133 50 23 0 0 0 chr2 42259615 42259638 -210996945 + AT_rich Low_complexity Low_complexity 1 23 0 1586 164 7 41 chr2 42259688 42259844 -210996739 - AluJo SINE Alu -30 282 139 2281 79 0 30 chr2 42259844 42260149 -210996434 - AluY SINE Alu -15 296 1 840 231 19 9 chr2 42260149 42260284 -210996299 - AluJo SINE Alu -175 137 1 1586 164 7 41 chr2 42260149 42260284 -210996299 - AluJo SINE Alu -173 139 1 225 0 0 0 chr2 42260714 42260739 -210995844 + (A)n Simple_repeat Simple_repeat 1 25 0 303 28 0 0 chr2 42261599 42261635 -210994948 + (TA)n Simple_repeat Simple_repeat 1 36 0 232 356 60 28 chr2 42261777 42262061 -210994522 + L2 LINE L2 2591 2883 -431 265 289 52 21 chr2 42262080 42262177 -210994406 + MER103 DNA DNA 66 165 -1 1387 142 78 0 chr2 42262295 42262527 -210994056 - AluSx SINE Alu -1 311 62 1525 152 3 95 chr2 42262636 42262972 -210993611 + AluJo SINE Alu 1 305 -7 2037 136 7 3 chr2 42262979 42263288 -210993295 + AluSg SINE Alu 1 310 0 1749 170 0 29 chr2 42263397 42263709 -210992874 - AluSx SINE Alu -9 303 1 284 354 102 81 chr2 42263955 42264277 -210992306 + L2 LINE L2 2925 3253 -19 234 305 8 85 chr2 42264716 42264834 -210991749 + MIR SINE MIR 16 124 -84 3031 161 47 69 chr2 42265054 42265761 -210990822 - LTR8 LTR ERV1 0 691 1 816 316 57 38 chr2 42266185 42266638 -210989945 + LTR33 LTR ERVL 10 471 -50 2180 97 7 0 chr2 42266924 42267213 -210989370 + AluSp SINE Alu 4 294 -19 384 22 0 0 chr2 42267221 42267266 -210989317 + (CA)n Simple_repeat Simple_repeat 2 46 0 409 370 63 55 chr2 42267424 42268163 -210988420 + L2 LINE L2 2533 3268 -4 192 322 151 33 chr2 42268493 42268645 -210987938 - MER5A DNA MER1_type -1 188 19 2340 78 0 0 chr2 42268876 42269169 -210987414 + AluY SINE Alu 1 293 -18 232 210 40 40 chr2 42269326 42269426 -210987157 + L1MC4 LINE L1 6607 6706 -1336 440 263 95 28 chr2 42269954 42270133 -210986450 + MIR3 SINE MIR 18 208 0 180 0 0 0 chr2 42270600 42270620 -210985963 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 22 0 0 0 chr2 42270684 42270706 -210985877 + AT_rich Low_complexity Low_complexity 1 22 0 193 150 10 40 chr2 42270815 42270915 -210985668 + (TA)n Simple_repeat Simple_repeat 1 97 0 254 291 0 0 chr2 42272017 42272072 -210984511 - MIR SINE MIR -129 133 79 405 325 39 26 chr2 42272777 42272931 -210983652 + MER5B DNA MER1_type 23 178 0 366 23 0 0 chr2 42273307 42273350 -210983233 + (TG)n Simple_repeat Simple_repeat 2 44 0 234 271 0 43 chr2 42275411 42275481 -210981102 - MIR SINE MIR -87 175 109 347 252 134 17 chr2 42275543 42275662 -210980921 - MER5B DNA MER1_type -43 135 3 345 250 102 31 chr2 42276417 42276545 -210980038 + MIR3 SINE MIR 20 156 -52 282 73 0 0 chr2 42278571 42278612 -210977971 + (CA)n Simple_repeat Simple_repeat 2 42 0 34 65 0 0 chr2 42279610 42279672 -210976911 + AT_rich Low_complexity Low_complexity 1 62 0 309 349 101 0 chr2 42280124 42280253 -210976330 + L2 LINE L2 3124 3265 -7 807 284 53 53 chr2 42280688 42281256 -210975327 + L1MC5 LINE L1 7347 7914 -47 21 0 0 0 chr2 42282026 42282047 -210974536 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 42282790 42282812 -210973771 + AT_rich Low_complexity Low_complexity 1 22 0 1127 60 0 13 chr2 42284554 42284705 -210971878 - L1PA5 LINE L1 0 6154 6006 1111 30 0 0 chr2 42284707 42284840 -210971743 + L1PA5 LINE L1 5840 5972 -182 201 386 35 58 chr2 42285030 42285201 -210971382 - L2 LINE L2 -89 3183 3017 1283 177 87 7 chr2 42285395 42285695 -210970888 - MER33 DNA MER1_type 0 324 1 21 0 0 0 chr2 42286260 42286281 -210970302 + AT_rich Low_complexity Low_complexity 1 21 0 2812 6 0 0 chr2 42287618 42287929 -210968654 + AluYa5 SINE Alu 1 311 0 23 54 0 0 chr2 42288198 42288235 -210968348 + AT_rich Low_complexity Low_complexity 1 37 0 1649 234 85 13 chr2 42288377 42288974 -210967609 - MER114 LTR ERV -8 640 1 26 64 0 0 chr2 42289011 42289058 -210967525 + AT_rich Low_complexity Low_complexity 1 47 0 2170 94 23 29 chr2 42289236 42289543 -210967040 + AluSg SINE Alu 2 306 -4 439 184 56 72 chr2 42289745 42289870 -210966713 + MIR SINE MIR 69 191 -71 2273 99 0 3 chr2 42290878 42291180 -210965403 + AluSc SINE Alu 1 301 -8 21 57 0 0 chr2 42291266 42291301 -210965282 + AT_rich Low_complexity Low_complexity 1 35 0 26 64 0 0 chr2 42291662 42291709 -210964874 + AT_rich Low_complexity Low_complexity 1 47 0 398 179 26 13 chr2 42291939 42292017 -210964566 - MER2 DNA MER2_type -266 79 1 317 289 41 0 chr2 42292030 42292151 -210964432 + L1ME3A LINE L1 5852 5977 -193 627 306 44 23 chr2 42292277 42292362 -210964221 - L1ME4a LINE L1 -239 5882 5800 13839 140 38 6 chr2 42292362 42294703 -210961880 + Tigger1 DNA MER2_type 2 2418 0 627 306 44 23 chr2 42294703 42295006 -210961577 - L1ME4a LINE L1 -321 5800 5486 465 283 29 29 chr2 42295312 42295485 -210961098 - L1ME4a LINE L1 -1946 4200 4028 1485 255 25 22 chr2 42295487 42295852 -210960731 + MLT1A2 LTR MaLR 1 366 -8 905 284 72 29 chr2 42295918 42296503 -210960080 - L1ME4a LINE L1 -2197 3949 3340 25 0 0 0 chr2 42296533 42296558 -210960025 + AT_rich Low_complexity Low_complexity 1 25 0 672 336 84 35 chr2 42297635 42298087 -210958496 + MLT1K LTR MaLR 2 475 -113 314 225 160 80 chr2 42298144 42298344 -210958239 + L1M4 LINE L1 4598 4813 -1333 460 289 57 86 chr2 42298470 42298750 -210957833 - LTR33 LTR ERVL -211 310 39 2879 192 49 9 chr2 42300214 42300844 -210955739 - L1MB7 LINE L1 -69 6115 5461 307 347 35 14 chr2 42301118 42301262 -210955321 + MIR SINE MIR 47 193 -69 1548 225 45 74 chr2 42301265 42301701 -210954882 - MLT1D LTR MaLR -4 501 81 1938 121 73 48 chr2 42301701 42302056 -210954527 - THE1B LTR MaLR 0 364 1 1548 225 45 74 chr2 42302056 42302135 -210954448 - MLT1D LTR MaLR -424 81 1 240 228 35 0 chr2 42304460 42304517 -210952066 - L1MC4 LINE L1 -142 7900 7842 2372 258 91 45 chr2 42304519 42305701 -210950882 - L1MC4a LINE L1 -117 7691 6510 23 0 0 0 chr2 42305736 42305759 -210950824 + AT_rich Low_complexity Low_complexity 1 23 0 3547 220 60 66 chr2 42305776 42306159 -210950424 - L1MB7 LINE L1 -18 6166 5782 342 0 0 0 chr2 42306159 42306197 -210950386 + (TA)n Simple_repeat Simple_repeat 1 38 0 3547 220 60 66 chr2 42306197 42307681 -210948902 - L1MB7 LINE L1 -402 5782 4329 856 118 0 0 chr2 42307681 42307817 -210948766 - L1MA5 LINE L1 -2 6298 6163 3547 220 60 66 chr2 42307817 42307921 -210948662 - L1MB7 LINE L1 -1855 4329 4226 1015 120 0 0 chr2 42308053 42308203 -210948380 - FRAM SINE Alu -7 169 20 24 32 0 0 chr2 42308697 42308728 -210947855 + AT_rich Low_complexity Low_complexity 1 31 0 4515 137 12 3 chr2 42309293 42310025 -210946558 + L1MA2 LINE L1 5521 6259 -45 495 120 0 0 chr2 42310025 42310100 -210946483 + AluS SINE Alu 231 305 -5 28 29 0 0 chr2 42310174 42310209 -210946374 + AT_rich Low_complexity Low_complexity 1 35 0 361 312 23 46 chr2 42310543 42310716 -210945867 - L1MC4a LINE L1 -1962 5846 5678 368 320 137 17 chr2 42310969 42311144 -210945439 - MIR SINE MIR -11 251 56 655 142 9 0 chr2 42311491 42311597 -210944986 + THE1B LTR MaLR 258 364 0 30 27 0 0 chr2 42311747 42311784 -210944799 + AT_rich Low_complexity Low_complexity 1 37 0 977 145 27 32 chr2 42311786 42311972 -210944611 - L1MA1 LINE L1 -8 6294 6110 29 60 0 0 chr2 42313536 42313586 -210942997 + AT_rich Low_complexity Low_complexity 1 50 0 278 298 0 0 chr2 42315633 42315717 -210940866 - L1MC4 LINE L1 -1345 6697 6614 450 274 51 40 chr2 42316836 42317011 -210939572 - MER5B DNA MER1_type 0 178 2 865 124 16 163 chr2 42317491 42317748 -210938835 + L1MA10 LINE L1 6106 6324 -10 249 220 140 60 chr2 42317813 42317913 -210938670 + MIR SINE MIR 42 149 -113 353 290 67 67 chr2 42317977 42318246 -210938337 + L1ME4a LINE L1 5617 5885 -236 233 237 68 76 chr2 42318500 42318618 -210937965 + L1ME4a LINE L1 6003 6119 -2 282 164 0 0 chr2 42318643 42318698 -210937885 + (TA)n Simple_repeat Simple_repeat 1 55 0 287 338 23 44 chr2 42319723 42319907 -210936676 + MER5A DNA MER1_type 5 188 -1 377 278 104 0 chr2 42320888 42321003 -210935580 + MIR SINE MIR 126 252 -10 260 283 86 46 chr2 42322895 42323047 -210933536 - L2 LINE L2 0 3313 3156 218 168 42 42 chr2 42323124 42323219 -210933364 + (TTATA)n Simple_repeat Simple_repeat 3 97 0 1805 182 55 3 chr2 42323433 42323780 -210932803 + MLT1A1 LTR MaLR 1 365 0 417 313 17 68 chr2 42324195 42324371 -210932212 + MER91B DNA MER1_type 20 186 -4 201 194 60 0 chr2 42324535 42324553 -210932030 + A-rich Low_complexity Low_complexity 3 18 -55 2137 111 3 0 chr2 42324553 42324841 -210931742 + AluSx SINE Alu 1 289 -23 201 194 60 0 chr2 42324841 42324889 -210931694 + A-rich Low_complexity Low_complexity 18 73 0 525 280 103 73 chr2 42325845 42326631 -210929952 - L2 LINE L2 -198 3115 2201 21 36 0 0 chr2 42326774 42326802 -210929781 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 42326967 42326995 -210929588 + AT_rich Low_complexity Low_complexity 1 28 0 199 294 10 39 chr2 42327157 42327259 -210929324 + L2 LINE L2 1732 1830 -1484 460 305 111 11 chr2 42328282 42328472 -210928111 - MIR SINE MIR -43 219 11 1963 149 3 0 chr2 42330442 42330738 -210925845 + AluSp SINE Alu 1 297 -16 5254 189 9 3 chr2 42330755 42331699 -210924884 - MSTB-int LTR MaLR -701 950 1 2171 185 37 0 chr2 42331699 42332109 -210924474 - MSTB LTR MaLR 0 426 2 457 179 0 0 chr2 42332189 42332267 -210924316 - AluJ/FLAM SINE Alu -234 78 1 342 209 100 33 chr2 42332360 42332570 -210924013 - L1M4 LINE L1 -3084 3062 2839 514 114 13 0 chr2 42332949 42333028 -210923555 - MADE1 DNA Mariner 0 80 1 1507 206 63 15 chr2 42334893 42335228 -210921355 - MLT1A1 LTR MaLR 0 365 15 2016 188 43 10 chr2 42335268 42335682 -210920901 - MSTA LTR MaLR 0 428 1 420 243 221 7 chr2 42335789 42335929 -210920654 + MIR SINE MIR 76 245 -17 1674 146 52 45 chr2 42336596 42336905 -210919678 - AluJb SINE Alu -1 311 1 1974 100 3 44 chr2 42338136 42338455 -210918128 - L1MA1 LINE L1 0 6302 5997 231 219 0 0 chr2 42340349 42340390 -210916193 + L2 LINE L2 3263 3303 -10 251 235 94 35 chr2 42340768 42340853 -210915730 + L2 LINE L2 3222 3311 -2 377 315 51 19 chr2 42341705 42341962 -210914621 + L1ME LINE L1 5479 5743 -378 25 0 0 0 chr2 42341980 42342005 -210914578 + AT_rich Low_complexity Low_complexity 1 25 0 1040 295 32 32 chr2 42342286 42342978 -210913605 + L1ME1 LINE L1 2646 3337 -2809 * 2210 241 119 27 chr2 42342977 42344515 -210912068 + L1ME1 LINE L1 4490 6159 -7 698 282 75 31 chr2 42344575 42345277 -210911306 + L1ME3A LINE L1 4733 5654 -516 318 339 48 43 chr2 42345279 42345465 -210911118 - MER63A DNA MER1_type -2 208 22 601 251 104 86 chr2 42345465 42345909 -210910674 + L1ME3A LINE L1 5668 6119 -2 674 253 18 0 chr2 42345940 42346110 -210910473 - L1ME3A LINE L1 -331 5839 5667 504 269 32 19 chr2 42346214 42346370 -210910213 + MIR SINE MIR 33 190 -72 204 203 34 0 chr2 42347246 42347305 -210909278 + T-rich Low_complexity Low_complexity 4 64 0 1705 193 65 3 chr2 42347387 42347771 -210908812 + L1MB4 LINE L1 5486 5893 -287 492 298 34 11 chr2 42347970 42348148 -210908435 + MIR SINE MIR 3 184 -78 242 194 16 0 chr2 42348150 42348212 -210908371 + (TA)n Simple_repeat Simple_repeat 2 64 0 532 327 42 12 chr2 42348528 42348879 -210907704 - L1ME LINE L1 -403 5767 5401 685 99 45 9 chr2 42350238 42350349 -210906234 - L1PA15 LINE L1 0 6165 6051 401 117 0 0 chr2 42351303 42351363 -210905220 - Alu SINE Alu 0 302 243 30 27 0 0 chr2 42351628 42351665 -210904918 + AT_rich Low_complexity Low_complexity 1 37 0 1209 217 74 19 chr2 42352304 42352627 -210903956 - MER2 DNA MER2_type 0 345 5 449 159 0 25 chr2 42353115 42353278 -210903305 + (TA)n Simple_repeat Simple_repeat 1 159 0 1891 155 3 0 chr2 42353497 42353793 -210902790 + AluSx SINE Alu 2 298 -14 313 304 76 8 chr2 42354207 42354395 -210902188 - L1ME3A LINE L1 -637 5541 5343 1553 202 3 10 chr2 42354473 42354775 -210901808 - AluJo SINE Alu -8 304 5 261 290 50 0 chr2 42354924 42355024 -210901559 - L1MEd LINE L1 -5041 1078 974 22 0 0 0 chr2 42355041 42355063 -210901520 + AT_rich Low_complexity Low_complexity 1 22 0 327 261 54 69 chr2 42355292 42355422 -210901161 - L1ME3A LINE L1 -1 6169 6042 1843 226 60 45 chr2 42357390 42357922 -210898661 + MLT1E2 LTR MaLR 63 602 -24 26 0 0 0 chr2 42359681 42359707 -210896876 + AT_rich Low_complexity Low_complexity 1 26 0 193 356 68 0 chr2 42360855 42360914 -210895669 - L2 LINE L2 -74 3198 3136 766 303 37 8 chr2 42361720 42361961 -210894622 + MIR SINE MIR 15 262 0 494 291 0 0 chr2 42362299 42362433 -210894150 + L2 LINE L2 1864 1997 -1317 216 328 89 62 chr2 42362463 42362832 -210893751 - L3 LINE CR1 -105 1472 1094 243 379 33 13 chr2 42364053 42364206 -210892377 + L3 LINE CR1 1421 1576 -1 943 299 163 55 chr2 42364431 42364799 -210891784 - L1M4 LINE L1 -1911 4235 3908 1455 219 28 14 chr2 42364799 42365082 -210891501 - AluJo SINE Alu -21 291 5 943 299 163 55 chr2 42365082 42366042 -210890541 - L1M4 LINE L1 -2238 3908 2763 2223 85 0 23 chr2 42366151 42366458 -210890125 + AluSg SINE Alu 1 300 -10 594 323 94 52 chr2 42368381 42368883 -210887700 + L2 LINE L2 1234 1756 -1558 343 344 51 28 chr2 42369330 42369545 -210887038 + L2 LINE L2 1753 1972 -1342 943 287 32 56 chr2 42369640 42370072 -210886511 + L2 LINE L2 1892 2313 -1001 405 313 8 15 chr2 42370049 42370180 -210886403 + L2 LINE L2 3182 3311 -2 * 393 75 0 0 chr2 42370414 42370467 -210886116 + (TG)n Simple_repeat Simple_repeat 2 54 0 21 36 0 0 chr2 42371001 42371029 -210885554 + AT_rich Low_complexity Low_complexity 1 28 0 38 81 0 0 chr2 42371070 42371157 -210885426 + AT_rich Low_complexity Low_complexity 1 87 0 4889 164 51 1 chr2 42371399 42372416 -210884167 + L1PA15 LINE L1 5103 6158 -7 1451 199 3 34 chr2 42372497 42372793 -210883790 + AluJo SINE Alu 5 291 -21 296 336 72 16 chr2 42372911 42373036 -210883547 + MIR3 SINE MIR 38 169 -39 24 85 0 0 chr2 42376189 42376248 -210880335 + AT_rich Low_complexity Low_complexity 1 59 0 400 270 40 20 chr2 42377160 42377308 -210879275 + HAL1 LINE L1 2 152 -2355 541 158 20 20 chr2 42377310 42377411 -210879172 + FRAM SINE Alu 66 166 -10 295 338 112 44 chr2 42377431 42377816 -210878767 + HAL1 LINE L1 186 596 -1911 1638 201 23 51 chr2 42377832 42378225 -210878358 + MLT1B LTR MaLR 9 390 0 219 384 151 0 chr2 42378706 42378852 -210877731 - MIR3 SINE MIR -1 207 40 1717 199 73 25 chr2 42379142 42379550 -210877033 + MSTA LTR MaLR 1 428 0 390 91 0 0 chr2 42380246 42380301 -210876282 + (TG)n Simple_repeat Simple_repeat 2 56 0 2032 157 6 0 chr2 42380390 42380746 -210875837 + L1PA16 LINE L1 5805 6162 -4 241 280 180 10 chr2 42381245 42381345 -210875238 + MIR SINE MIR 7 123 -139 1982 120 43 0 chr2 42381417 42381716 -210874867 + AluSx SINE Alu 1 312 0 541 303 43 97 chr2 42381778 42382221 -210874362 - L2 LINE L2 -592 2722 2304 23 0 0 0 chr2 42382388 42382411 -210874172 + AT_rich Low_complexity Low_complexity 1 23 0 336 299 35 33 chr2 42382759 42382957 -210873626 - MIR SINE MIR -27 235 43 245 188 0 31 chr2 42383190 42383254 -210873329 - LTR66 LTR ERVL -175 435 374 413 291 151 11 chr2 42383258 42383529 -210873054 - L2 LINE L2 -38 3275 2967 749 214 83 18 chr2 42383530 42383698 -210872885 - MER5A DNA MER1_type -8 181 3 796 313 138 3 chr2 42383808 42384134 -210872449 - L2 LINE L2 -502 2812 2443 22 0 0 0 chr2 42384200 42384222 -210872361 + AT_rich Low_complexity Low_complexity 1 22 0 25 75 0 0 chr2 42385127 42385180 -210871403 + AT_rich Low_complexity Low_complexity 1 53 0 22 0 0 0 chr2 42385315 42385337 -210871246 + AT_rich Low_complexity Low_complexity 1 22 0 229 340 133 0 chr2 42386067 42386217 -210870366 + MIR SINE MIR 74 243 -19 220 371 113 0 chr2 42386832 42386956 -210869627 + L2 LINE L2 3134 3271 -1 22 35 0 0 chr2 42387926 42387955 -210868628 + AT_rich Low_complexity Low_complexity 1 29 0 26 50 0 0 chr2 42388593 42388633 -210867950 + AT_rich Low_complexity Low_complexity 1 40 0 387 41 0 0 chr2 42389961 42390010 -210866573 + (TG)n Simple_repeat Simple_repeat 1 49 0 395 78 16 0 chr2 42390012 42390076 -210866507 + (GA)n Simple_repeat Simple_repeat 2 66 0 41 0 0 0 chr2 42391052 42391093 -210865490 + AT_rich Low_complexity Low_complexity 1 41 0 194 372 70 12 chr2 42391679 42391765 -210864818 + L2 LINE L2 3139 3229 -43 22 0 0 0 chr2 42392332 42392354 -210864229 + AT_rich Low_complexity Low_complexity 1 22 0 25 75 0 0 chr2 42392507 42392560 -210864023 + AT_rich Low_complexity Low_complexity 1 53 0 1835 79 254 211 chr2 42392840 42393400 -210863183 + LTR12 LTR ERV1 1 584 -130 15031 148 29 26 chr2 42393419 42396583 -210860000 + HERV30 LTR ERV1 42 3228 -5029 6342 96 2 8 chr2 42396590 42397470 -210859113 + HERV30 LTR ERV1 4080 4954 -3445 1342 145 22 42 chr2 42397463 42397911 -210858672 + HERV17 LTR ERV1 706 1219 -5677 * 918 90 0 0 chr2 42397908 42398042 -210858541 + HERV17 LTR ERV1 1592 1725 -5171 * 4494 108 3 0 chr2 42398032 42398673 -210857910 + HERV17 LTR ERV1 7757 8399 0 234 180 0 40 chr2 42398673 42398723 -210857860 + LTR30 LTR ERV1 1 48 -674 2007 71 227 178 chr2 42398723 42399229 -210857354 + LTR12 LTR ERV1 51 581 -133 281 331 33 33 chr2 42399571 42400052 -210856531 + L1M4 LINE L1 3007 3487 -2659 278 352 42 46 chr2 42400311 42400527 -210856056 - L1MEd LINE L1 -5566 553 339 713 265 39 20 chr2 42400573 42400777 -210855806 - MER63A DNA MER1_type 0 210 3 706 325 66 39 chr2 42400784 42401267 -210855316 - L1MEd LINE L1 -5619 500 5 300 353 58 17 chr2 42401633 42401806 -210854777 - L1ME LINE L1 -309 5812 5633 5720 85 0 3 chr2 42401972 42402736 -210853847 - L1PA7 LINE L1 0 6154 5393 * 20621 102 8 2 chr2 42402732 42405789 -210850794 + L1PA7 LINE L1 2321 5396 -750 223 353 0 35 chr2 42406388 42406504 -210850079 - MER5A DNA MER1_type -66 123 12 1109 308 104 10 chr2 42406990 42407490 -210849093 - MLT1H LTR MaLR -2 547 1 23 33 0 0 chr2 42409147 42409177 -210847406 + AT_rich Low_complexity Low_complexity 1 30 0 2351 161 24 28 chr2 42409842 42410302 -210846281 - L1PB4 LINE L1 -3 6153 5696 540 318 53 0 chr2 42410379 42410549 -210846034 + MIR SINE MIR 78 256 -6 226 336 43 43 chr2 42410719 42410835 -210845748 - L2 LINE L2 -13 3259 3144 214 306 28 0 chr2 42411915 42411987 -210844596 - MER5B DNA MER1_type -7 171 98 1735 133 29 45 chr2 42412146 42412455 -210844128 + AluSq SINE Alu 10 313 0 212 224 104 80 chr2 42412620 42412745 -210843838 - L2 LINE L2 -36 3277 3150 13884 41 10 0 chr2 42412919 42415394 -210841189 + L1PA4 LINE L1 3666 6150 -5 195 313 50 30 chr2 42415612 42415711 -210840872 - MER5A DNA MER1_type -1 188 88 23 54 0 0 chr2 42415945 42415982 -210840601 + AT_rich Low_complexity Low_complexity 1 37 0 3183 81 9 9 chr2 42416306 42416748 -210839835 - L1PA7 LINE L1 -5 6149 5708 1389 192 3 54 chr2 42416840 42417137 -210839446 + AluJo SINE Alu 1 282 -30 473 113 0 12 chr2 42417141 42417221 -210839362 + L1PA13 LINE L1 6084 6162 -1 307 0 23 23 chr2 42417437 42417481 -210839102 + (TC)n Simple_repeat Simple_repeat 1 44 0 * 411 68 0 0 chr2 42417480 42417539 -210839044 + (CA)n Simple_repeat Simple_repeat 1 59 0 965 190 92 35 chr2 42418159 42418474 -210838109 - MER33 DNA MER1_type -4 320 1 193 353 35 0 chr2 42418626 42418711 -210837872 - L2 LINE L2 0 3272 3185 371 301 93 21 chr2 42419384 42419673 -210836910 + L1ME4a LINE L1 5561 5870 -251 * 1685 261 102 33 chr2 42419672 42420608 -210835975 - L1ME3A LINE L1 0 6170 5174 2207 281 88 69 chr2 42420835 42422039 -210834544 - L2 LINE L2 -39 3274 2026 1998 152 0 7 chr2 42422039 42422349 -210834234 + AluSg SINE Alu 1 308 -2 2207 281 88 69 chr2 42422349 42422664 -210833919 - L2 LINE L2 -1287 2026 1719 1680 80 0 0 chr2 42423392 42423616 -210832967 + L1PB1 LINE L1 5928 6151 0 29 28 0 0 chr2 42423733 42423769 -210832814 + AT_rich Low_complexity Low_complexity 1 36 0 544 231 32 54 chr2 42424577 42424763 -210831820 - L2 LINE L2 -7 3306 3125 738 301 81 59 chr2 42425457 42426015 -210830568 - MLT1G LTR MaLR -1 589 20 598 341 65 21 chr2 42426013 42426353 -210830230 + MLT1I LTR MaLR 55 409 0 * 458 357 63 12 chr2 42427230 42427482 -210829101 - L3 LINE CR1 -1 1576 1312 276 298 1 37 chr2 42427618 42427743 -210828840 - L1ME3A LINE L1 -75 6087 5968 761 283 154 17 chr2 42427843 42428252 -210828331 - L1ME3A LINE L1 -214 5948 5483 25 0 0 0 chr2 42428276 42428301 -210828282 + AT_rich Low_complexity Low_complexity 1 25 0 6381 81 14 1 chr2 42428361 42429748 -210826835 - L1PA7 LINE L1 -15 6139 4740 16741 135 138 96 chr2 42429752 42430832 -210825751 - L1PA7 LINE L1 -1769 4377 3344 2196 81 0 11 chr2 42430832 42431147 -210825436 - AluY SINE Alu 0 312 1 16741 135 138 96 chr2 42431147 42434256 -210822327 - L1PA7 LINE L1 -2802 3344 12 33 56 0 0 chr2 42434360 42434414 -210822169 + AT_rich Low_complexity Low_complexity 1 54 0 319 345 20 14 chr2 42434523 42434671 -210821912 - L3 LINE CR1 -469 1108 960 775 76 0 0 chr2 42435759 42435864 -210820719 - L1PA4 LINE L1 -58 6097 5993 218 54 0 27 chr2 42435880 42435917 -210820666 + (TAAAA)n Simple_repeat Simple_repeat 4 39 0 1997 306 28 38 chr2 42436379 42437461 -210819122 - L2 LINE L2 0 3313 2237 1650 246 62 55 chr2 42437803 42438353 -210818230 + MLT2B3 LTR ERVL 1 554 0 180 294 39 0 chr2 42438617 42438668 -210817915 - L3 LINE CR1 -1 1576 1524 274 384 40 8 chr2 42439185 42439310 -210817273 + MIR3 SINE MIR 57 185 -23 1526 187 72 47 chr2 42439311 42439847 -210816736 + MER67C LTR ERV1 1 514 0 842 294 80 53 chr2 42440618 42441612 -210814971 + HAL1 LINE L1 769 1820 -687 355 248 100 43 chr2 42441653 42441883 -210814700 + HAL1b LINE L1 691 933 -415 832 153 25 0 chr2 42442150 42442313 -210814270 + GA-rich Low_complexity Low_complexity 2 168 0 559 363 53 44 chr2 42442909 42443731 -210812852 - MERVL LTR ERVL -1219 4266 3437 260 255 31 20 chr2 42444088 42444186 -210812397 + (TTTA)n Simple_repeat Simple_repeat 4 102 0 1969 147 40 6 chr2 42445029 42445355 -210811228 + MER1B DNA MER1_type 1 337 0 181 285 300 8 chr2 42447290 42447420 -210809163 + MER5A DNA MER1_type 6 173 -16 26 30 0 0 chr2 42447622 42447655 -210808928 + AT_rich Low_complexity Low_complexity 1 33 0 25 0 0 0 chr2 42448142 42448167 -210808416 + AT_rich Low_complexity Low_complexity 1 25 0 26 64 0 0 chr2 42448629 42448676 -210807907 + AT_rich Low_complexity Low_complexity 1 47 0 244 263 23 23 chr2 42448913 42449088 -210807495 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 * 259 230 46 35 chr2 42448978 42449152 -210807431 + (TTATA)n Simple_repeat Simple_repeat 2 177 0 195 186 14 29 chr2 42449508 42449578 -210807005 + (CATATA)n Simple_repeat Simple_repeat 4 72 0 389 332 68 24 chr2 42449792 42449997 -210806586 - L1ME3A LINE L1 -213 6026 5813 494 304 91 38 chr2 42450112 42450563 -210806020 - L1ME3A LINE L1 -2196 4019 3545 1689 187 40 75 chr2 42450678 42451106 -210805477 - MLT2C2 LTR ERVL -48 416 4 2212 75 4 0 chr2 42451106 42451387 -210805196 + AluY SINE Alu 27 308 -3 331 231 110 35 chr2 42451510 42451800 -210804783 - L1ME3A LINE L1 -2913 3302 2991 198 150 25 0 chr2 42452019 42452059 -210804524 - L2 LINE L2 -5 3308 3268 222 143 0 0 chr2 42452179 42452228 -210804355 + (TG)n Simple_repeat Simple_repeat 2 50 0 335 248 0 30 chr2 42452600 42452622 -210803961 - L1MA10 LINE L1 -66 6268 6247 905 238 54 66 chr2 42452622 42452926 -210803657 - L1ME1 LINE L1 -79 6087 5788 1051 194 138 67 chr2 42452926 42453267 -210803316 + MLT1A1 LTR MaLR 1 365 0 905 238 54 66 chr2 42453267 42453386 -210803197 - L1ME1 LINE L1 -378 5788 5669 451 240 120 17 chr2 42453523 42453698 -210802885 - L1ME3A LINE L1 -5534 862 670 796 277 97 26 chr2 42453710 42454020 -210802563 - L1ME3A LINE L1 -5822 574 243 304 311 44 0 chr2 42454021 42454111 -210802472 - L1ME3A LINE L1 -6211 185 92 26 0 0 0 chr2 42454734 42454760 -210801823 + AT_rich Low_complexity Low_complexity 1 26 0 791 235 36 5 chr2 42455187 42455383 -210801200 - MER3 DNA MER1_type 0 209 8 657 146 81 65 chr2 42456302 42456487 -210800096 - MER53 DNA DNA 0 189 2 1730 215 11 6 chr2 42456729 42457092 -210799491 + MLT1A1 LTR MaLR 1 365 0 592 326 16 52 chr2 42458587 42458952 -210797631 - MLT1J LTR MaLR 0 511 160 572 206 108 77 chr2 42459203 42459285 -210797298 - MIR SINE MIR -21 241 163 2401 157 18 21 chr2 42459285 42459719 -210796864 + Tigger2a DNA MER2_type 2 434 0 572 206 108 77 chr2 42459719 42459830 -210796753 - MIR SINE MIR -99 163 42 24 0 0 0 chr2 42459876 42459900 -210796683 + AT_rich Low_complexity Low_complexity 1 24 0 230 188 156 0 chr2 42459993 42460057 -210796526 - L2 LINE L2 -550 2764 2691 443 362 11 0 chr2 42462509 42462686 -210793897 - ERVL LTR ERVL -4078 1686 1508 263 133 0 17 chr2 42462895 42462955 -210793628 + (TA)n Simple_repeat Simple_repeat 2 60 0 266 164 0 16 chr2 42463195 42463256 -210793327 + (TA)n Simple_repeat Simple_repeat 2 61 0 849 218 32 48 chr2 42463261 42463509 -210793074 - MLT1I LTR MaLR -90 319 76 286 314 48 5 chr2 42464857 42465064 -210791519 - L1MEc LINE L1 -4868 1528 1313 396 103 0 0 chr2 42465204 42465262 -210791321 + (TA)n Simple_repeat Simple_repeat 1 58 0 1037 233 97 50 chr2 42465542 42465946 -210790637 + MLT1C LTR MaLR 45 467 0 387 269 108 93 chr2 42465989 42466268 -210790315 - L1MEc LINE L1 -5397 808 526 496 300 0 0 chr2 42466691 42466831 -210789752 + L1MD2 LINE L1 6202 6341 -18 21 36 0 0 chr2 42466833 42466861 -210789722 + AT_rich Low_complexity Low_complexity 1 28 0 1494 140 34 82 chr2 42467010 42467506 -210789077 + MER51A LTR ERV1 2 634 0 422 315 106 0 chr2 42467538 42467773 -210788810 - MLT1J LTR MaLR -249 262 3 866 106 0 0 chr2 42469155 42469268 -210787315 + AluSq/x SINE Alu 3 115 -197 617 72 0 21 chr2 42469269 42469366 -210787217 + AluY SINE Alu 215 309 -2 1412 115 0 0 chr2 42469366 42469566 -210787017 + AluSx SINE Alu 104 303 -9 22 0 0 0 chr2 42470508 42470530 -210786053 + AT_rich Low_complexity Low_complexity 1 22 0 440 184 35 71 chr2 42471771 42471856 -210784727 + L1MC4 LINE L1 7902 7982 -60 2770 16 0 9 chr2 42471856 42472177 -210784406 - AluYb8 SINE Alu 0 318 1 440 184 35 71 chr2 42472177 42472232 -210784351 + L1MC4 LINE L1 7982 8037 -5 274 339 69 39 chr2 42472295 42472425 -210784158 - MIR3 SINE MIR -72 136 3 263 321 75 0 chr2 42472455 42472589 -210783994 - MIR SINE MIR -109 153 10 435 282 44 103 chr2 42473736 42474144 -210782439 - MLT1J LTR MaLR -32 479 96 719 306 73 53 chr2 42474849 42475247 -210781336 + L2 LINE L2 2907 3312 -1 21 57 0 0 chr2 42476340 42476375 -210780208 + AT_rich Low_complexity Low_complexity 1 35 0 207 0 0 0 chr2 42477034 42477057 -210779526 + (T)n Simple_repeat Simple_repeat 1 23 0 797 82 16 55 chr2 42477247 42477430 -210779153 + (TTTC)n Simple_repeat Simple_repeat 4 179 0 376 152 0 33 chr2 42477439 42477531 -210779052 + CT-rich Low_complexity Low_complexity 3 91 0 1240 185 100 4 chr2 42477531 42477780 -210778803 - AluSx SINE Alu -39 273 1 329 266 76 21 chr2 42477851 42478140 -210778443 - L1ME4a LINE L1 -3 6118 5766 1791 96 16 4 chr2 42479010 42479260 -210777323 + L1PA7 LINE L1 5887 6139 -15 218 254 183 0 chr2 42480682 42480753 -210775830 + L2 LINE L2 3178 3261 -11 213 65 0 0 chr2 42480784 42480815 -210775768 + (CA)n Simple_repeat Simple_repeat 1 31 0 656 225 147 28 chr2 42482000 42482320 -210774263 - L1ME4a LINE L1 -832 5314 4957 400 291 48 39 chr2 42482325 42482588 -210773995 - L1ME4a LINE L1 -1894 4252 3975 1711 160 103 3 chr2 42484443 42484774 -210771809 - THE1B LTR MaLR 0 364 1 288 53 0 0 chr2 42484875 42484913 -210771670 + (TG)n Simple_repeat Simple_repeat 2 39 0 2621 116 62 10 chr2 42486856 42487260 -210769323 + MER83 LTR ERV1 1 425 -23 569 258 122 18 chr2 42489510 42489731 -210766852 - MER112 DNA MER1_type -13 247 4 192 229 29 43 chr2 42489761 42489831 -210766752 - L2 LINE L2 -939 2375 2307 3634 177 81 25 chr2 42489940 42491341 -210765242 - L1MA7 LINE L1 0 6291 4686 662 301 61 9 chr2 42492006 42492219 -210764364 - MIR SINE MIR -26 236 13 467 120 0 13 chr2 42492300 42492375 -210764208 - MADE1 DNA Mariner -5 75 2 2217 104 48 22 chr2 42492517 42492872 -210763711 + THE1B LTR MaLR 1 364 0 21 0 0 0 chr2 42493022 42493043 -210763540 + AT_rich Low_complexity Low_complexity 1 21 0 190 286 0 0 chr2 42493161 42493203 -210763380 + MIR SINE MIR 119 160 -102 431 315 150 9 chr2 42494689 42494902 -210761681 + MIR SINE MIR 6 248 -14 27 73 0 0 chr2 42495276 42495331 -210761252 + AT_rich Low_complexity Low_complexity 1 55 0 206 291 82 73 chr2 42495413 42495523 -210761060 + MIR SINE MIR 34 144 -118 275 286 14 0 chr2 42495591 42495661 -210760922 - L2 LINE L2 -4 3268 3198 2278 283 68 38 chr2 42495846 42497290 -210759293 + L1M4c LINE L1 1060 2561 -3821 8066 155 48 46 chr2 42497292 42498902 -210757681 - Tigger1 DNA MER2_type -804 1614 2 414 0 0 0 chr2 42498931 42498977 -210757606 + (CA)n Simple_repeat Simple_repeat 2 47 0 1863 202 24 30 chr2 42498978 42499443 -210757140 + L1MA6 LINE L1 5832 6293 -7 2242 225 77 25 chr2 42499453 42500288 -210756295 + L1M4c LINE L1 3008 3885 -2497 584 179 66 46 chr2 42500281 42500432 -210756151 + L1M4c LINE L1 4260 4413 -1969 * 3870 194 34 17 chr2 42500429 42501229 -210755354 + L1MA9 LINE L1 5353 6170 -142 351 44 0 0 chr2 42501229 42501274 -210755309 + (CA)n Simple_repeat Simple_repeat 1 45 0 3870 194 34 17 chr2 42501274 42501318 -210755265 + L1MA9 LINE L1 6170 6212 -100 32 43 0 0 chr2 42501332 42501378 -210755205 + AT_rich Low_complexity Low_complexity 1 46 0 11365 31 1 0 chr2 42501835 42503974 -210752609 + L1PA3 LINE L1 4028 6169 0 203 0 0 36 chr2 42505434 42505462 -210751121 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1140 179 91 33 chr2 42506471 42506745 -210749838 - AluJo SINE Alu -11 301 12 708 173 25 117 chr2 42506859 42507056 -210749527 + MLT1D LTR MaLR 1 179 -326 743 237 118 0 chr2 42507089 42507275 -210749308 + MLT1D LTR MaLR 298 505 0 288 257 7 50 chr2 42507980 42508120 -210748463 + L1ME4a LINE L1 5765 5898 -223 1646 176 95 15 chr2 42508137 42508604 -210747979 - Charlie1b DNA MER1_type -6 517 4 344 268 67 61 chr2 42508778 42508942 -210747641 - MIR SINE MIR -4 258 94 244 274 0 0 chr2 42509060 42509122 -210747461 + (TG)n Simple_repeat Simple_repeat 2 63 0 213 132 0 0 chr2 42509723 42509761 -210746822 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 21 57 0 0 chr2 42510101 42510136 -210746447 + AT_rich Low_complexity Low_complexity 1 35 0 2283 60 0 0 chr2 42510489 42510842 -210745741 + AluY SINE Alu 1 353 0 1901 114 12 2 chr2 42511528 42511840 -210744743 + L1P LINE L1 4948 5260 -886 1275 262 68 46 chr2 42512418 42512872 -210743711 - MLT2B1 LTR ERVL -56 464 1 184 309 29 0 chr2 42514493 42514561 -210742022 + L3 LINE CR1 739 808 -769 221 428 12 6 chr2 42516176 42516342 -210740241 + L3 LINE CR1 946 1112 -465 322 71 0 36 chr2 42516469 42516525 -210740058 + (TA)n Simple_repeat Simple_repeat 2 55 0 892 179 22 0 chr2 42516788 42516967 -210739616 - L1MB3 LINE L1 -10 6173 5991 268 265 146 19 chr2 42517339 42517579 -210739004 - L1MB3 LINE L1 -535 5586 5311 314 326 81 27 chr2 42517598 42517856 -210738727 - L1MB3 LINE L1 -852 5294 5023 5056 134 16 14 chr2 42518204 42519037 -210737546 + Tigger1 DNA MER2_type 1585 2418 0 235 327 100 33 chr2 42519049 42519199 -210737384 - MIR SINE MIR -41 221 62 374 0 22 0 chr2 42519582 42519628 -210736955 + (TA)n Simple_repeat Simple_repeat 1 47 0 2216 101 3 7 chr2 42519906 42520213 -210736370 - AluSx SINE Alu -6 306 1 2031 123 6 63 chr2 42520947 42521531 -210735052 + MER51A LTR ERV1 1 633 -1 930 129 18 6 chr2 42521698 42521861 -210734722 - L1MB2 LINE L1 -3 6168 6004 2575 52 3 0 chr2 42522141 42522450 -210734133 - AluY SINE Alu -1 310 1 713 318 90 50 chr2 42522453 42524331 -210732252 - L1M4 LINE L1 -841 5305 3352 * 1339 282 99 36 chr2 42524286 42524794 -210731789 + L1ME3 LINE L1 4559 5033 -1129 770 167 0 6 chr2 42524794 42524950 -210731633 - L1MA4 LINE L1 -1 6299 6145 1339 282 99 36 chr2 42524950 42525887 -210730696 + L1ME3 LINE L1 5033 6129 -33 435 310 16 75 chr2 42526499 42526754 -210729829 - MLT1J LTR MaLR -112 399 160 572 206 108 77 chr2 42527005 42527087 -210729496 - MIR SINE MIR -21 241 163 2401 157 18 21 chr2 42527087 42527521 -210729062 + Tigger2a DNA MER2_type 2 434 0 572 206 108 77 chr2 42527521 42527632 -210728951 - MIR SINE MIR -99 163 42 24 0 0 0 chr2 42527678 42527702 -210728881 + AT_rich Low_complexity Low_complexity 1 24 0 230 188 156 0 chr2 42527795 42527859 -210728724 - L2 LINE L2 -550 2764 2691 443 362 11 0 chr2 42530310 42530487 -210726096 - ERVL LTR ERVL -4078 1686 1508 263 133 0 17 chr2 42530696 42530756 -210725827 + (TA)n Simple_repeat Simple_repeat 2 60 0 266 164 0 16 chr2 42530996 42531057 -210725526 + (TA)n Simple_repeat Simple_repeat 2 61 0 849 218 32 48 chr2 42531062 42531310 -210725273 - MLT1I LTR MaLR -90 319 76 286 314 48 5 chr2 42532661 42532868 -210723715 - L1MDa LINE L1 -4868 2270 2055 216 0 0 0 chr2 42533008 42533032 -210723551 + (TA)n Simple_repeat Simple_repeat 1 24 0 3248 258 40 15 chr2 42533141 42534506 -210722077 - L1MDa LINE L1 -2751 4206 2801 624 248 32 6 chr2 42534516 42534673 -210721910 - L1MDa LINE L1 -6538 321 161 314 308 59 18 chr2 42534674 42534843 -210721740 + L1MB7 LINE L1 5709 5884 -300 23 33 0 0 chr2 42534878 42534908 -210721675 + AT_rich Low_complexity Low_complexity 1 30 0 334 266 35 131 chr2 42535171 42535400 -210721183 - L2 LINE L2 0 3313 3107 2078 106 7 0 chr2 42535400 42535700 -210720883 + AluSx SINE Alu 11 312 0 297 214 344 30 chr2 42535756 42535887 -210720696 + MER5A DNA MER1_type 11 182 -7 760 113 16 0 chr2 42536083 42536214 -210720369 - L1PA12 LINE L1 -234 5934 5797 877 57 89 0 chr2 42537014 42537138 -210719445 - MER85 DNA T2_type -3 136 2 703 285 97 13 chr2 42537197 42537425 -210719158 + MIR SINE MIR 16 262 0 210 179 26 0 chr2 42537510 42537549 -210719034 + (CATATA)n Simple_repeat Simple_repeat 3 42 0 227 203 0 68 chr2 42538292 42538366 -210718217 - Charlie8 DNA MER1_type -841 1576 1508 22 35 0 0 chr2 42538514 42538543 -210718040 + AT_rich Low_complexity Low_complexity 1 29 0 1856 186 113 7 chr2 42539437 42539845 -210716738 + MER74C LTR ERVL 1 451 -9 195 308 84 37 chr2 42540345 42540452 -210716131 + MIR SINE MIR 10 121 -141 2531 176 22 56 chr2 42540452 42540985 -210715598 + MLT2B2 LTR ERVL 1 515 0 197 269 45 15 chr2 42541144 42541211 -210715372 + MIR SINE MIR 120 188 -74 199 264 57 0 chr2 42541316 42541369 -210715214 - L2 LINE L2 -7 3306 3251 23 54 0 0 chr2 42541513 42541550 -210715033 + AT_rich Low_complexity Low_complexity 1 37 0 1992 168 35 10 chr2 42541716 42541729 -210714854 - L1MB7 LINE L1 -178 6006 5995 815 93 29 21 chr2 42541729 42541869 -210714714 - L1MB8 LINE L1 0 6178 6038 1992 168 35 10 chr2 42541869 42542259 -210714324 - L1MB7 LINE L1 -189 5995 5593 18303 65 16 3 chr2 42542293 42545544 -210711039 - L1PA6 LINE L1 -11 6143 2884 264 293 13 0 chr2 42546366 42546441 -210710142 + MIR3 SINE MIR 126 201 -7 411 38 0 0 chr2 42547081 42547134 -210709449 + (CA)n Simple_repeat Simple_repeat 2 54 0 338 274 13 105 chr2 42547364 42547517 -210709066 - MIR SINE MIR -73 189 51 23 68 0 0 chr2 42547721 42547765 -210708818 + AT_rich Low_complexity Low_complexity 1 44 0 40 49 0 0 chr2 42547823 42547884 -210708699 + AT_rich Low_complexity Low_complexity 1 61 0 2001 237 36 5 chr2 42547899 42548346 -210708237 + MLT2B2 LTR ERVL 1 461 -54 210 208 0 0 chr2 42548348 42548396 -210708187 + (TG)n Simple_repeat Simple_repeat 2 49 0 238 405 101 35 chr2 42548732 42548959 -210707624 + L2 LINE L2 3031 3272 0 1870 142 29 26 chr2 42549161 42549472 -210707111 + AluSx SINE Alu 1 312 0 225 333 0 24 chr2 42549493 42549577 -210707006 + MLT1J2 LTR MaLR 153 234 -315 251 85 85 68 chr2 42549721 42549780 -210706803 + MLT1J2 LTR MaLR 364 423 -27 830 338 91 51 chr2 42550245 42551062 -210705521 - L2 LINE L2 -299 3014 2166 253 258 0 67 chr2 42551658 42551747 -210704836 + LTR67 LTR ERVL 427 509 -48 279 133 0 0 chr2 42551882 42551927 -210704656 + (TA)n Simple_repeat Simple_repeat 2 46 0 1563 187 53 11 chr2 42551927 42552210 -210704373 - AluJb SINE Alu -17 295 1 4278 216 42 19 chr2 42552395 42552964 -210703619 + L1MD1 LINE L1 4730 5285 -957 2063 106 0 50 chr2 42552964 42553286 -210703297 + AluSp SINE Alu 1 306 -7 4278 216 42 19 chr2 42553286 42554183 -210702400 + L1MD1 LINE L1 5285 6229 -13 297 68 0 0 chr2 42554557 42554601 -210701982 + (TA)n Simple_repeat Simple_repeat 2 45 0 3924 151 9 2 chr2 42554601 42555817 -210700766 - L1P5 LINE L1 -371 5780 4555 254 333 8 24 chr2 42557211 42557337 -210699246 + CT-rich Low_complexity Low_complexity 2 125 0 1590 31 0 0 chr2 42557569 42557795 -210698788 - L1PA4 LINE L1 -703 5452 5227 5992 33 6 0 chr2 42557795 42558513 -210698070 + L1PA4 LINE L1 5420 6147 -8 23 0 0 29 chr2 42558513 42558535 -210698048 + AT_rich Low_complexity Low_complexity 1 23 -10 482 212 18 0 chr2 42558535 42558648 -210697935 + L1MD1 LINE L1 6128 6242 0 23 0 0 29 chr2 42558648 42558659 -210697924 + AT_rich Low_complexity Low_complexity 23 33 0 2201 74 17 24 chr2 42558672 42558968 -210697615 + AluSc SINE Alu 1 294 -15 561 294 65 45 chr2 42559241 42559486 -210697097 - MIR SINE MIR 0 262 13 354 23 0 0 chr2 42561078 42561121 -210695462 + (TAGA)n Simple_repeat Simple_repeat 3 45 0 22 0 0 0 chr2 42561281 42561303 -210695280 + AT_rich Low_complexity Low_complexity 1 22 0 1889 134 7 20 chr2 42561901 42562207 -210694376 - AluSx SINE Alu -10 302 1 626 180 56 0 chr2 42562356 42562491 -210694092 + MIR SINE MIR 98 240 -22 218 309 0 0 chr2 42562506 42562561 -210694022 - MER91B DNA MER1_type -135 55 1 315 297 30 10 chr2 42562584 42562685 -210693898 - MIR SINE MIR -111 151 49 346 382 58 14 chr2 42564286 42564493 -210692090 + MIR SINE MIR 28 243 -19 2291 50 46 0 chr2 42564687 42564967 -210691616 - AluY SINE Alu -6 305 13 23 0 0 0 chr2 42565397 42565420 -210691163 + AT_rich Low_complexity Low_complexity 1 23 0 304 306 61 24 chr2 42565479 42565809 -210690774 - L1ME LINE L1 -441 5680 5316 270 194 0 0 chr2 42566735 42566807 -210689776 + (TA)n Simple_repeat Simple_repeat 1 72 0 31 0 0 0 chr2 42568317 42568348 -210688235 + AT_rich Low_complexity Low_complexity 1 31 0 369 250 108 40 chr2 42569008 42569184 -210687399 - MER5A DNA MER1_type -1 188 1 204 392 108 18 chr2 42569365 42569531 -210687052 - MIR3 SINE MIR -11 197 17 335 120 0 0 chr2 42569615 42569665 -210686918 + MADE1 DNA Mariner 1 50 -30 21 0 0 0 chr2 42571182 42571203 -210685380 + AT_rich Low_complexity Low_complexity 1 21 0 611 203 0 38 chr2 42571203 42571336 -210685247 - FLAM_A SINE Alu -9 133 6 207 100 0 0 chr2 42572554 42572584 -210683999 + (TAGA)n Simple_repeat Simple_repeat 1 30 0 1106 273 71 19 chr2 42573778 42574258 -210682325 + L1MDa LINE L1 1366 1870 -4670 567 176 15 7 chr2 42574291 42574427 -210682156 + GA-rich Low_complexity Low_complexity 3 139 0 447 175 48 79 chr2 42574498 42574624 -210681959 + L1MD2 LINE L1 6194 6315 -44 503 266 142 41 chr2 42576429 42576895 -210679688 - HAL1 LINE L1 -15 2492 1980 2555 220 64 9 chr2 42576939 42577802 -210678781 + L1MB7 LINE L1 4969 5873 -311 884 281 68 38 chr2 42577798 42578267 -210678316 - HAL1 LINE L1 -745 1762 1280 * 2206 105 28 25 chr2 42578426 42578787 -210677796 - L1PA13 LINE L1 0 6163 5802 295 73 0 0 chr2 42578787 42578828 -210677755 + L1PA13 LINE L1 5758 5798 -367 949 69 8 15 chr2 42578956 42579086 -210677497 - AluY SINE Alu -17 294 166 181 286 41 0 chr2 42580692 42580741 -210675842 + MIR SINE MIR 91 141 -67 2163 112 7 3 chr2 42581775 42582079 -210674504 + AluSq SINE Alu 1 305 -8 581 281 67 52 chr2 42582185 42582786 -210673797 - L1ME4a LINE L1 -106 6015 5405 706 297 121 7 chr2 42583259 42583549 -210673034 - MLT1K LTR MaLR 0 588 266 443 322 77 36 chr2 42583791 42584196 -210672387 - L1ME4a LINE L1 -1807 4339 3911 373 308 58 46 chr2 42585735 42585975 -210670608 - MIR SINE MIR -12 250 8 323 316 52 29 chr2 42587261 42587397 -210669186 - L2 LINE L2 0 3272 3134 191 355 60 63 chr2 42588189 42588457 -210668126 - L2 LINE L2 -1070 2244 1978 11365 30 2 0 chr2 42588463 42590229 -210666354 - L1P1 LINE L1 -359 5796 4028 180 343 82 45 chr2 42590642 42590776 -210665807 - L2 LINE L2 -337 2977 2839 244 254 0 0 chr2 42591593 42591648 -210664935 + (TA)n Simple_repeat Simple_repeat 1 55 0 1865 99 11 0 chr2 42592871 42593133 -210663450 - AluSq SINE Alu -6 307 43 1193 250 20 36 chr2 42593474 42593918 -210662665 + L1MDb LINE L1 900 1336 -5073 2345 80 0 10 chr2 42594601 42594913 -210661670 + AluY SINE Alu 1 309 -2 734 86 76 0 chr2 42595021 42595126 -210661457 + L1PA7 LINE L1 6034 6146 -8 675 47 0 0 chr2 42595426 42595512 -210661071 - L1MA1 LINE L1 -7 6295 6210 250 218 36 0 chr2 42596094 42596149 -210660434 + MER5A DNA MER1_type 1 57 -132 239 333 0 0 chr2 42596421 42596496 -210660087 - MIR3 SINE MIR -13 195 121 281 294 24 4 chr2 42596509 42596658 -210659925 - MIR SINE MIR -12 250 44 23 0 0 0 chr2 42597469 42597492 -210659091 + AT_rich Low_complexity Low_complexity 1 23 0 4372 160 103 43 chr2 42598336 42599279 -210657304 - L1MC1 LINE L1 -2 6331 5333 27 0 0 0 chr2 42599387 42599414 -210657169 + AT_rich Low_complexity Low_complexity 1 27 0 2050 131 47 33 chr2 42599618 42599977 -210656606 + THE1B LTR MaLR 1 364 0 1633 215 6 36 chr2 42602908 42603380 -210653203 + MER89 LTR ERV1 2 559 0 757 221 138 0 chr2 42604300 42604481 -210652102 + MER6B DNA MER2_type 4 209 -1 354 318 45 62 chr2 42605350 42605526 -210651057 - MIR SINE MIR -71 191 19 24 32 0 0 chr2 42605642 42605673 -210650910 + AT_rich Low_complexity Low_complexity 1 31 0 266 326 0 113 chr2 42605710 42605851 -210650732 + MER5A DNA MER1_type 40 164 -25 243 317 0 12 chr2 42606739 42606821 -210649762 - MIR SINE MIR -129 133 53 1103 185 110 55 chr2 42607603 42607949 -210648634 + MLT1A1 LTR MaLR 1 365 0 353 301 20 0 chr2 42607972 42608118 -210648465 - L1ME3A LINE L1 -220 5950 5802 410 298 96 46 chr2 42608124 42608717 -210647866 - L1ME3A LINE L1 -570 5594 4967 243 0 0 0 chr2 42608815 42608842 -210647741 + (TG)n Simple_repeat Simple_repeat 2 28 0 376 305 47 14 chr2 42608864 42609077 -210647506 - L1ME3A LINE L1 -1356 4790 4571 301 193 0 96 chr2 42609384 42609467 -210647116 + L1MB7 LINE L1 6106 6180 -4 27 29 0 0 chr2 42609467 42609501 -210647082 + AT_rich Low_complexity Low_complexity 1 34 0 1364 190 52 28 chr2 42609502 42609791 -210646792 - AluJb SINE Alu -16 296 1 425 292 146 11 chr2 42611424 42611609 -210644974 + MIR SINE MIR 48 257 -5 3702 203 55 7 chr2 42612161 42613102 -210643481 + L1MB4 LINE L1 5188 6180 0 2604 99 8 6 chr2 42613478 42613841 -210642742 + THE1B LTR MaLR 1 364 0 241 372 54 14 chr2 42614575 42614723 -210641860 + L2 LINE L2 2572 2725 -589 2486 48 0 0 chr2 42614775 42615070 -210641513 + AluY SINE Alu 1 295 -16 256 188 12 129 chr2 42616115 42616151 -210640432 - MLT1-int LTR MaLR -864 507 485 2247 88 0 0 chr2 42616151 42616448 -210640135 - AluY SINE Alu -14 297 1 256 188 12 129 chr2 42616448 42616496 -210640087 - MLT1-int LTR MaLR -886 485 433 1890 162 18 21 chr2 42616496 42616830 -210639753 + MER1B DNA MER1_type 1 333 -6 1081 316 48 45 chr2 42617013 42617530 -210639053 - L2 LINE L2 -292 3021 2505 701 252 14 0 chr2 42617808 42617951 -210638632 + FRAM SINE Alu 2 146 -30 258 148 0 0 chr2 42617955 42618016 -210638567 + L1MA7 LINE L1 6230 6290 -1 9655 183 98 30 chr2 42618842 42620873 -210635710 + L1M2 LINE L1 2 2170 -4679 3870 198 40 1 chr2 42620869 42622095 -210634488 + L1MC1 LINE L1 4735 6010 -323 * 488 114 0 0 chr2 42623134 42623204 -210633379 + MLT2B3 LTR ERVL 1 70 -484 950 207 54 89 chr2 42623308 42623588 -210632995 + MLT2B3 LTR ERVL 67 336 -218 2952 261 69 9 chr2 42623644 42624441 -210632142 + HERVL LTR ERVL 1 845 -4809 814 208 51 115 chr2 42624458 42624848 -210631735 - MLT1A1 LTR MaLR 0 365 1 188 342 142 0 chr2 42624925 42625045 -210631538 - MIR SINE MIR -31 231 95 749 268 50 18 chr2 42626036 42626256 -210630327 - MIR SINE MIR 0 262 36 733 297 121 57 chr2 42626750 42627221 -210629362 - L2 LINE L2 -1 3312 2812 295 286 44 11 chr2 42627481 42627572 -210629011 - MER5A DNA MER1_type -83 106 13 340 320 76 41 chr2 42627701 42628413 -210628170 + L1ME3A LINE L1 4235 4980 -1166 2776 168 6 2 chr2 42628413 42628896 -210627687 + MER31A LTR ERV1 1 485 0 340 320 76 41 chr2 42628896 42628985 -210627598 + L1ME3A LINE L1 4980 5064 -1082 398 310 56 56 chr2 42629100 42629815 -210626768 + L1ME3A LINE L1 5217 5950 -220 231 196 0 0 chr2 42631278 42631324 -210625259 - MLT2D LTR ERVL 0 397 352 261 233 35 0 chr2 42631355 42631441 -210625142 + L1MC4 LINE L1 6614 6702 -1340 * 307 267 0 0 chr2 42631400 42631490 -210625093 - L1MC4 LINE L1 -1339 6703 6614 258 32 0 0 chr2 42631490 42631521 -210625062 + (TA)n Simple_repeat Simple_repeat 2 32 0 1366 188 100 26 chr2 42631524 42631865 -210624718 - MLT2D LTR ERVL -48 366 1 267 292 52 30 chr2 42632913 42633217 -210623366 + L1MDa LINE L1 1510 1872 -4815 * 2057 240 56 38 chr2 42633207 42633500 -210623083 - L1M4 LINE L1 -883 6074 5788 2164 118 3 3 chr2 42633500 42633806 -210622777 - AluSc SINE Alu -3 306 1 2057 240 56 38 chr2 42633806 42634195 -210622388 - L1M4 LINE L1 -1169 5788 5380 1302 254 60 20 chr2 42634228 42634681 -210621902 - L1M4 LINE L1 -2001 4956 4486 5335 264 43 36 chr2 42634790 42634874 -210621709 - L1M4 LINE L1 -4699 2260 2178 2147 126 0 13 chr2 42634874 42635191 -210621392 - AluSq SINE Alu 0 313 1 5335 264 43 36 chr2 42635191 42635802 -210620781 - L1M4 LINE L1 -4781 2178 1573 1464 225 48 19 chr2 42635802 42635914 -210620669 - MLT1B LTR MaLR -1 389 282 1878 138 7 23 chr2 42635914 42636219 -210620364 - AluSc SINE Alu -9 300 1 1464 225 48 19 chr2 42636219 42636484 -210620099 - MLT1B LTR MaLR -108 282 1 5335 264 43 36 chr2 42636484 42638019 -210618564 - L1M4 LINE L1 -5386 1573 10 279 261 42 35 chr2 42638021 42638163 -210618420 + L1ME3A LINE L1 6018 6160 -10 866 20 0 0 chr2 42638176 42638278 -210618305 - L1PA2 LINE L1 -1 6154 6053 327 339 35 0 chr2 42638303 42638418 -210618165 + MIR SINE MIR 79 197 -65 4696 157 85 26 chr2 42638437 42640025 -210616558 - L1MA5A LINE L1 -2 6997 5183 3827 193 51 12 chr2 42640037 42641016 -210615567 - L1PB4 LINE L1 -8 6148 5127 * 9413 210 24 18 chr2 42641002 42643627 -210612956 - L1MA5A LINE L1 -1646 5202 2558 180 97 0 0 chr2 42643929 42643960 -210612623 + (A)n Simple_repeat Simple_repeat 1 31 0 378 282 28 56 chr2 42644428 42644570 -210612013 + L2 LINE L2 3123 3260 -12 536 149 0 11 chr2 42644605 42644692 -210611891 + LTR23 LTR ERV1 320 405 -32 559 382 35 19 chr2 42644883 42645185 -210611398 - L2 LINE L2 -352 2962 2649 1153 235 75 17 chr2 42645185 42645530 -210611053 + MLT1A1 LTR MaLR 1 365 0 559 382 35 19 chr2 42645530 42645659 -210610924 - L2 LINE L2 -665 2649 2524 189 0 0 0 chr2 42645843 42645864 -210610719 + (TA)n Simple_repeat Simple_repeat 2 22 0 1642 215 25 6 chr2 42646408 42646766 -210609817 - MLT1A1 LTR MaLR 0 365 1 189 0 0 0 chr2 42647010 42647031 -210609552 + (TG)n Simple_repeat Simple_repeat 1 21 0 198 171 0 0 chr2 42647289 42647330 -210609253 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 227 324 111 19 chr2 42647554 42647662 -210608921 - L3b LINE CR1 -11 1572 1455 350 164 87 29 chr2 42648187 42648288 -210608295 - MLT1H1 LTR MaLR 0 555 449 1385 226 34 15 chr2 42648288 42648615 -210607968 + MER58B DNA MER1_type 4 336 -5 301 276 120 89 chr2 42648633 42648959 -210607624 - MLT1H1 LTR MaLR -110 439 104 230 239 11 0 chr2 42649490 42649582 -210607001 + (TA)n Simple_repeat Simple_repeat 2 94 0 22 0 0 0 chr2 42651781 42651803 -210604780 + AT_rich Low_complexity Low_complexity 1 22 0 300 261 148 40 chr2 42651859 42652035 -210604548 - L1ME3A LINE L1 -220 5950 5756 403 256 111 26 chr2 42652220 42652506 -210604077 - L1ME3A LINE L1 -662 5502 5192 230 304 144 17 chr2 42652726 42653025 -210603558 - L1ME3A LINE L1 -1299 4847 4511 2434 27 7 0 chr2 42653488 42653785 -210602798 - L1PA3 LINE L1 -574 5581 5283 5093 16 0 0 chr2 42653785 42654364 -210602219 + L1PA3 LINE L1 5574 6154 -1 27 0 0 0 chr2 42654364 42654391 -210602192 + AT_rich Low_complexity Low_complexity 1 27 0 611 263 45 28 chr2 42654502 42654681 -210601902 + LTR16A LTR ERVL 260 441 -9 379 286 143 11 chr2 42654924 42655099 -210601484 + MIR SINE MIR 34 231 -31 1025 297 129 9 chr2 42657009 42657591 -210598992 - L1MC4a LINE L1 -1747 6061 5410 1246 277 70 106 chr2 42657613 42658195 -210598388 - L2 LINE L2 0 3313 2762 1936 141 13 0 chr2 42658195 42658500 -210598083 - AluSx SINE Alu -3 309 1 1246 277 70 106 chr2 42658500 42658849 -210597734 - L2 LINE L2 -551 2762 2402 24 53 0 0 chr2 42658980 42659018 -210597565 + AT_rich Low_complexity Low_complexity 1 38 0 415 292 60 66 chr2 42659157 42660037 -210596546 - L1MC4a LINE L1 -1111 5035 4161 304 289 51 101 chr2 42660406 42660874 -210595709 + L2 LINE L2 2 3309 -4 339 275 54 22 chr2 42660919 42661166 -210595417 - L1M4 LINE L1 -2327 3819 3563 34 0 0 0 chr2 42661379 42661413 -210595170 + AT_rich Low_complexity Low_complexity 1 34 0 261 315 0 0 chr2 42661422 42661495 -210595088 + (TG)n Simple_repeat Simple_repeat 2 74 0 32 57 0 0 chr2 42661630 42661683 -210594900 + AT_rich Low_complexity Low_complexity 1 53 0 239 216 62 41 chr2 42661780 42661877 -210594706 - L1M4 LINE L1 -3129 3017 2919 345 309 43 24 chr2 42662382 42662592 -210593991 - L1M4 LINE L1 -3779 2367 2154 27 0 0 0 chr2 42662661 42662688 -210593895 + AT_rich Low_complexity Low_complexity 1 27 0 772 293 63 6 chr2 42662954 42663272 -210593311 - HAL1b LINE L1 -734 614 279 266 277 20 10 chr2 42663555 42663656 -210592927 - MLT1J2 LTR MaLR -288 162 61 351 245 245 0 chr2 42663664 42663762 -210592821 + FLAM_A SINE Alu 1 122 -11 1389 253 70 66 chr2 42664133 42664722 -210591861 + MLT1E LTR MaLR 2 592 -1 399 266 87 29 chr2 42665531 42665704 -210590879 + MLT1K LTR MaLR 379 561 -27 217 333 57 9 chr2 42665899 42666004 -210590579 + L2 LINE L2 3168 3277 -36 21 36 0 0 chr2 42667564 42667592 -210588991 + AT_rich Low_complexity Low_complexity 1 28 0 189 226 0 0 chr2 42667668 42667721 -210588862 + GA-rich Low_complexity Low_complexity 4 56 0 1425 116 0 5 chr2 42668698 42668897 -210587686 + AluSg/x SINE Alu 100 297 -15 411 335 244 16 chr2 42669202 42669686 -210586897 - L3 LINE CR1 -5 1572 979 24 0 0 0 chr2 42669951 42669975 -210586608 + AT_rich Low_complexity Low_complexity 1 24 0 200 191 43 0 chr2 42670158 42670205 -210586378 + (CATA)n Simple_repeat Simple_repeat 3 51 0 4435 45 21 56 chr2 42670256 42671341 -210585242 + MER11A LTR ERVK 1 1266 0 378 323 86 14 chr2 42671342 42671662 -210584921 + L1ME LINE L1 5265 5572 -590 355 282 120 40 chr2 42672026 42672327 -210584256 + HAL1b LINE L1 314 638 -710 28 0 0 0 chr2 42672774 42672802 -210583781 + AT_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr2 42673566 42673588 -210582995 + (TTA)n Simple_repeat Simple_repeat 2 23 0 404 125 0 0 chr2 42673593 42673649 -210582934 - AluS SINE Alu -26 276 221 22 0 0 0 chr2 42673656 42673678 -210582905 + AT_rich Low_complexity Low_complexity 1 22 0 594 280 145 55 chr2 42674259 42674791 -210581792 + L1 LINE L1 3758 4337 -1809 26 50 0 0 chr2 42674861 42674901 -210581682 + AT_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr2 42674939 42674961 -210581622 + AT_rich Low_complexity Low_complexity 1 22 0 40 59 0 0 chr2 42675069 42675137 -210581446 + AT_rich Low_complexity Low_complexity 1 68 0 960 260 51 13 chr2 42675230 42675622 -210580961 - L1MEc LINE L1 -4110 2286 1880 842 226 49 101 chr2 42675709 42676094 -210580489 - MLT1A1 LTR MaLR 0 365 1 2478 261 67 37 chr2 42676177 42676354 -210580229 - L1M1 LINE L1 -3699 3871 3701 390 21 0 0 chr2 42676354 42676401 -210580182 + (TG)n Simple_repeat Simple_repeat 2 48 0 2478 261 67 37 chr2 42676401 42677036 -210579547 - L1M1 LINE L1 -3869 3701 2979 2153 123 0 3 chr2 42677036 42677344 -210579239 - AluSx SINE Alu -5 307 1 2478 261 67 37 chr2 42677344 42677725 -210578858 - L1M1 LINE L1 -4591 2979 2611 1754 127 34 7 chr2 42678944 42679236 -210577347 + AluSx SINE Alu 1 300 -12 21 36 0 0 chr2 42681122 42681150 -210575433 + AT_rich Low_complexity Low_complexity 1 28 0 278 299 0 11 chr2 42681326 42681413 -210575170 + L1ME LINE L1 299 384 -5735 351 261 89 129 chr2 42681628 42681954 -210574629 + L1MEd LINE L1 613 925 -5194 270 120 20 40 chr2 42681956 42682006 -210574577 - MLT2D LTR ERVL 0 414 366 305 299 19 6 chr2 42682006 42682163 -210574420 + (TA)n Simple_repeat Simple_repeat 2 160 0 1818 173 42 33 chr2 42682194 42682553 -210574030 - MLT2D LTR ERVL -48 366 5 382 328 120 12 chr2 42682629 42682955 -210573628 + L1MEd LINE L1 2249 2609 -3520 1593 182 3 46 chr2 42683164 42683466 -210573117 + AluJb SINE Alu 5 293 -19 472 242 0 0 chr2 42683978 42684077 -210572506 - FRAM SINE Alu -11 165 67 803 307 54 44 chr2 42684827 42685686 -210570897 + L1ME LINE L1 403 1108 -5021 1502 196 10 26 chr2 42685686 42685997 -210570586 + AluJo SINE Alu 5 310 -2 803 307 54 44 chr2 42685997 42686055 -210570528 + L1ME LINE L1 1108 1164 -4965 1975 121 147 21 chr2 42686319 42686389 -210570194 - MSTA LTR MaLR 0 428 368 2100 96 20 3 chr2 42686389 42686682 -210569901 + AluSc SINE Alu 1 298 -11 1975 121 147 21 chr2 42686682 42686991 -210569592 - MSTA LTR MaLR -60 368 1 24 0 0 0 chr2 42687640 42687664 -210568919 + AT_rich Low_complexity Low_complexity 1 24 0 1576 204 0 26 chr2 42688563 42688872 -210567711 + AluJb SINE Alu 1 301 -11 207 69 0 0 chr2 42690550 42690579 -210566004 + (TG)n Simple_repeat Simple_repeat 2 30 0 214 208 21 0 chr2 42690838 42690886 -210565697 + (CATA)n Simple_repeat Simple_repeat 3 51 0 5759 153 14 42 chr2 42692263 42693493 -210563090 - L1MA4A LINE L1 -1 6302 5110 268 310 60 35 chr2 42693646 42693762 -210562821 + L2 LINE L2 3154 3272 0 1200 306 61 36 chr2 42694013 42694891 -210561692 + L2 LINE L2 2423 3313 0 981 271 86 17 chr2 42694984 42695334 -210561249 - MLT1A2 LTR MaLR 0 374 1 537 214 63 16 chr2 42695604 42695730 -210560853 - MER5A DNA MER1_type -57 132 1 201 216 0 0 chr2 42695740 42695777 -210560806 + MER5B DNA MER1_type 3 39 -139 5805 57 5 3 chr2 42695783 42696520 -210560063 + L1PA7 LINE L1 5411 6149 -5 27 29 0 0 chr2 42697246 42697280 -210559303 + AT_rich Low_complexity Low_complexity 1 34 0 189 0 0 0 chr2 42697280 42697301 -210559282 + (TA)n Simple_repeat Simple_repeat 1 21 0 413 342 17 33 chr2 42697420 42697660 -210558923 - L3 LINE CR1 -150 1427 1192 214 284 91 11 chr2 42697912 42698000 -210558583 - L3 LINE CR1 -456 1121 1027 496 317 120 61 chr2 42698231 42698332 -210558251 - L3 LINE CR1 -745 832 738 1632 141 12 4 chr2 42698332 42698580 -210558003 - AluSx SINE Alu -24 288 39 496 317 120 61 chr2 42698580 42698853 -210557730 - L3 LINE CR1 -839 738 436 702 276 65 53 chr2 42700660 42701001 -210555582 + L1ME3 LINE L1 5767 6111 -51 27 81 0 0 chr2 42701064 42701126 -210555457 + AT_rich Low_complexity Low_complexity 1 62 0 1342 93 19 131 chr2 42701186 42701445 -210555138 + MER30 DNA MER1_type 1 230 0 25 51 0 0 chr2 42701903 42701942 -210554641 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr2 42703594 42703616 -210552967 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr2 42703882 42703909 -210552674 + AT_rich Low_complexity Low_complexity 1 27 0 2267 148 19 0 chr2 42704960 42705338 -210551245 - L1PA16 LINE L1 -9 6157 5773 579 74 126 0 chr2 42705341 42705436 -210551147 + L1P4 LINE L1 5361 5467 -699 22 35 0 0 chr2 42705710 42705739 -210550844 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr2 42705928 42705953 -210550630 + AT_rich Low_complexity Low_complexity 1 25 0 1069 245 73 15 chr2 42706767 42707094 -210549489 - L1ME1 LINE L1 -15 6151 5806 313 227 68 23 chr2 42707572 42707660 -210548923 + L1MC4 LINE L1 6614 6705 -1337 202 250 0 0 chr2 42707661 42707705 -210548878 + (TA)n Simple_repeat Simple_repeat 1 44 0 4148 237 24 22 chr2 42707707 42707903 -210548680 - Tigger6a DNA MER2_type -528 1069 875 1444 202 16 45 chr2 42707903 42708279 -210548304 - MLT1A1 LTR MaLR 0 365 1 4148 237 24 22 chr2 42708279 42709148 -210547435 - Tigger6a DNA MER2_type -722 875 2 240 143 0 0 chr2 42710037 42710079 -210546504 + (TTTC)n Simple_repeat Simple_repeat 3 44 0 1352 180 51 8 chr2 42710392 42710648 -210545935 + AluJb SINE Alu 1 267 -45 25 0 0 0 chr2 42711100 42711125 -210545458 + AT_rich Low_complexity Low_complexity 1 25 0 319 89 0 0 chr2 42711243 42711288 -210545295 - MADE1 DNA Mariner 0 80 36 541 369 6 0 chr2 42711497 42711676 -210544907 + MIR SINE MIR 3 182 -80 2143 114 0 10 chr2 42712114 42712421 -210544162 + AluSg SINE Alu 1 304 -6 3007 240 33 29 chr2 42712809 42712822 -210543761 - L1 LINE L1 -3221 4344 4333 1791 110 93 28 chr2 42712822 42713112 -210543471 - AluY SINE Alu -2 309 1 3007 240 33 29 chr2 42713112 42713409 -210543174 - L1 LINE L1 -3232 4333 4039 716 196 8 8 chr2 42713409 42713542 -210543041 + FLAM_A SINE Alu 1 133 0 3007 240 33 29 chr2 42713542 42714788 -210541795 - L1 LINE L1 -3526 4039 2768 2140 321 151 25 chr2 42715313 42716980 -210539603 + L2 LINE L2 1409 3312 -1 33 0 0 0 chr2 42717248 42717281 -210539302 + AT_rich Low_complexity Low_complexity 1 33 0 210 294 43 22 chr2 42717383 42717475 -210539108 + L2 LINE L2 2699 2792 -522 320 242 189 7 chr2 42717737 42717890 -210538693 + MIR SINE MIR 72 252 -10 2472 118 3 14 chr2 42719096 42719462 -210537121 + LTR8 LTR ERV1 1 362 -329 2626 148 78 0 chr2 42719495 42719933 -210536650 - MER41C LTR ERV1 -82 472 1 2037 133 3 62 chr2 42719933 42720100 -210536483 + LTR8 LTR ERV1 359 496 -195 1792 43 56 0 chr2 42720100 42720331 -210536252 + L1PA7 LINE L1 5911 6154 0 2037 133 3 62 chr2 42720331 42720517 -210536066 + LTR8 LTR ERV1 496 691 0 21 0 0 0 chr2 42720583 42720604 -210535979 + AT_rich Low_complexity Low_complexity 1 21 0 222 131 0 49 chr2 42720859 42720920 -210535663 + (TATATG)n Simple_repeat Simple_repeat 5 62 0 1200 254 68 63 chr2 42722467 42722940 -210533643 - MLT1F1 LTR MaLR -22 545 71 474 18 0 0 chr2 42723534 42723589 -210532994 + (CA)n Simple_repeat Simple_repeat 2 56 0 2339 104 0 0 chr2 42723752 42724061 -210532522 + AluSx SINE Alu 1 309 -3 582 137 0 29 chr2 42724305 42724407 -210532176 + Alu SINE Alu 208 306 -5 391 289 13 39 chr2 42725089 42725245 -210531338 - MIR SINE MIR -80 182 31 595 271 43 0 chr2 42725549 42725737 -210530846 - MER63B DNA MER1_type 0 436 241 1443 162 0 19 chr2 42725777 42726042 -210530541 - MER1B DNA MER1_type 0 339 80 553 253 140 0 chr2 42726070 42726220 -210530363 - MER63B DNA MER1_type -263 173 3 557 87 29 10 chr2 42726246 42726349 -210530234 + (TCTA)n Simple_repeat Simple_repeat 2 106 0 249 170 38 0 chr2 42726377 42726430 -210530153 - L1MA9 LINE L1 -4 6308 6254 26 0 0 0 chr2 42726936 42726962 -210529621 + AT_rich Low_complexity Low_complexity 1 26 0 355 312 104 45 chr2 42728223 42728432 -210528151 - MIR SINE MIR -12 250 26 2086 133 0 3 chr2 42728432 42728732 -210527851 + AluSx SINE Alu 1 299 -13 355 312 104 45 chr2 42728732 42728743 -210527840 - MIR SINE MIR -236 26 17 216 0 0 0 chr2 42729646 42729670 -210526913 + (T)n Simple_repeat Simple_repeat 1 24 0 2255 199 34 44 chr2 42730251 42730814 -210525769 - MER74A LTR ERVL -1 557 1 2085 216 50 27 chr2 42731017 42731575 -210525008 - MER90 LTR ERV1 0 614 8 249 33 0 0 chr2 42731610 42731640 -210524943 + (CA)n Simple_repeat Simple_repeat 2 31 0 748 216 7 0 chr2 42731668 42731816 -210524767 + MER82 DNA MER2_type 29 177 -476 * 946 246 50 17 chr2 42731814 42732054 -210524529 + MER82 DNA MER2_type 405 652 -1 319 318 40 16 chr2 42732117 42732243 -210524340 - MIR SINE MIR -133 129 1 1996 208 82 24 chr2 42732741 42733250 -210523333 + MER92B LTR ERV1 98 636 0 2461 66 0 0 chr2 42734806 42735110 -210521473 + AluY SINE Alu 1 304 -7 24 0 0 0 chr2 42735424 42735448 -210521135 + AT_rich Low_complexity Low_complexity 1 24 0 343 272 101 13 chr2 42736249 42736407 -210520176 - L1M4 LINE L1 -805 5341 5170 1010 306 88 30 chr2 42736411 42737416 -210519167 - L1M4 LINE L1 -1120 5026 3964 617 251 196 19 chr2 42737454 42737872 -210518711 - L1MEc LINE L1 -3486 2729 2238 4999 175 34 8 chr2 42737905 42739053 -210517530 - L1MA7 LINE L1 -2 6289 5111 269 312 35 23 chr2 42739339 42739512 -210517071 - L1MEc LINE L1 -4579 1817 1643 852 191 5 43 chr2 42739530 42739740 -210516843 - L1MD3 LINE L1 -18 7977 7776 355 240 78 19 chr2 42739737 42739891 -210516692 + L1MEc LINE L1 2105 2267 -4129 * 25 31 0 0 chr2 42740020 42740052 -210516531 + AT_rich Low_complexity Low_complexity 1 32 0 23 54 0 0 chr2 42740137 42740174 -210516409 + AT_rich Low_complexity Low_complexity 1 37 0 290 353 79 16 chr2 42740327 42740517 -210516066 - MIR SINE MIR -41 221 20 186 43 0 0 chr2 42740851 42740874 -210515709 + (CA)n Simple_repeat Simple_repeat 2 24 0 209 180 20 0 chr2 42741726 42741776 -210514807 + (TA)n Simple_repeat Simple_repeat 1 51 0 442 275 14 43 chr2 42742072 42742210 -210514373 + L2 LINE L2 3180 3313 0 22 0 0 0 chr2 42742398 42742420 -210514163 + AT_rich Low_complexity Low_complexity 1 22 0 3378 316 123 23 chr2 42742763 42744633 -210511950 - L2 LINE L2 0 3313 1139 6167 93 3 8 chr2 42744633 42744863 -210511720 - L1PA11 LINE L1 -1 6173 5943 2494 59 0 3 chr2 42744863 42745168 -210511415 - AluY SINE Alu -7 304 1 6167 93 3 8 chr2 42745168 42746454 -210510129 - L1PA11 LINE L1 -231 5943 4657 3378 316 123 23 chr2 42746454 42746986 -210509597 - L2 LINE L2 -2174 1139 666 610 299 67 9 chr2 42746986 42747210 -210509373 + MIR SINE MIR 2 238 -24 2249 98 0 16 chr2 42747443 42747749 -210508834 - AluSg SINE Alu -6 304 4 802 173 0 0 chr2 42747987 42748120 -210508463 + FLAM_C SINE Alu 1 133 0 336 237 92 66 chr2 42748140 42748292 -210508291 + L1ME4a LINE L1 5966 6121 0 187 231 0 0 chr2 42748873 42748912 -210507671 + MIR SINE MIR 196 234 -28 269 272 81 69 chr2 42749011 42749184 -210507399 + MIR SINE MIR 37 211 -51 10258 144 49 26 chr2 42750703 42750872 -210505711 + Tigger2 DNA MER2_type 847 1011 -1707 1467 155 19 0 chr2 42750872 42751136 -210505447 - L1PB1 LINE L1 -1 6150 5882 10258 144 49 26 chr2 42751136 42752791 -210503792 + Tigger2 DNA MER2_type 1011 2713 -5 27 29 0 0 chr2 42753373 42753407 -210503176 + AT_rich Low_complexity Low_complexity 1 34 0 518 271 52 97 chr2 42753858 42754219 -210502364 - MLT1J LTR MaLR 0 511 170 1930 201 18 13 chr2 42754219 42754613 -210501970 - MSTD LTR MaLR 0 396 1 518 271 52 97 chr2 42754613 42754672 -210501911 - MLT1J LTR MaLR -341 170 110 1406 139 83 0 chr2 42754715 42754967 -210501616 + L1MA5A LINE L1 6015 6287 -10 2306 90 0 3 chr2 42756507 42756808 -210499775 + AluSc SINE Alu 1 300 -9 333 47 0 0 chr2 42756808 42756851 -210499732 + (TA)n Simple_repeat Simple_repeat 2 44 0 315 310 31 0 chr2 42757658 42757787 -210498796 + (TATATG)n Simple_repeat Simple_repeat 2 134 0 21 0 0 0 chr2 42757887 42757908 -210498675 + AT_rich Low_complexity Low_complexity 1 21 0 222 37 0 0 chr2 42758135 42758162 -210498421 + (TG)n Simple_repeat Simple_repeat 1 27 0 583 221 66 7 chr2 42758184 42758320 -210498263 - MER20 DNA MER1_type -58 161 18 211 291 142 30 chr2 42758346 42758480 -210498103 + MIR SINE MIR 40 188 -74 1913 150 0 3 chr2 42758491 42758784 -210497799 + AluSx SINE Alu 6 297 -15 193 368 53 34 chr2 42759593 42759916 -210496667 + L2 LINE L2 2417 2745 -569 2678 99 0 3 chr2 42759969 42760334 -210496249 - THE1B LTR MaLR 0 364 1 1838 124 10 33 chr2 42762375 42762674 -210493909 + AluSq SINE Alu 22 313 0 22 0 0 0 chr2 42762940 42762962 -210493621 + AT_rich Low_complexity Low_complexity 1 22 0 1008 270 20 27 chr2 42763179 42763472 -210493111 + MLT1A1 LTR MaLR 1 291 -74 1037 260 24 12 chr2 42763494 42763970 -210492613 - L1ME LINE L1 -559 5603 5122 1286 111 10 0 chr2 42763978 42764177 -210492406 - L1MA6 LINE L1 0 6300 6100 307 297 119 11 chr2 42764278 42764463 -210492120 - L1ME LINE L1 -1874 4272 4068 183 320 0 13 chr2 42764725 42764803 -210491780 + MIR SINE MIR 48 124 -138 1867 152 0 3 chr2 42764951 42765262 -210491321 + AluSq SINE Alu 3 312 0 21 0 0 0 chr2 42765286 42765307 -210491276 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 42766024 42766045 -210490538 + AT_rich Low_complexity Low_complexity 1 21 0 234 0 0 0 chr2 42767000 42767026 -210489557 + (CAA)n Simple_repeat Simple_repeat 2 27 0 307 278 104 35 chr2 42767448 42767563 -210489020 - MIR SINE MIR -135 127 5 1835 167 102 39 chr2 42768786 42769247 -210487336 + LTR2B LTR ERV1 1 490 0 210 128 0 0 chr2 42769545 42769584 -210486999 + (T)n Simple_repeat Simple_repeat 1 39 0 1085 199 0 0 chr2 42769841 42770037 -210486546 - AluJo SINE Alu -15 297 102 529 306 197 0 chr2 42771470 42771663 -210484920 - MIR SINE MIR -20 242 12 3755 177 7 6 chr2 42771901 42772617 -210483966 - L1PA13 LINE L1 -1294 4852 4136 * 5702 148 40 3 chr2 42772614 42773831 -210482752 + L1PA13 LINE L1 4885 6163 0 2330 60 0 10 chr2 42774068 42774368 -210482215 - AluY SINE Alu -14 297 1 2262 100 0 3 chr2 42774466 42774766 -210481817 + AluSq SINE Alu 3 301 -12 964 160 0 0 chr2 42774767 42774917 -210481666 + AluSg/x SINE Alu 133 282 -30 357 82 0 0 chr2 42774917 42774966 -210481617 + (TGAA)n Simple_repeat Simple_repeat 2 50 0 23 0 0 0 chr2 42776360 42776383 -210480200 + AT_rich Low_complexity Low_complexity 1 23 0 541 116 11 0 chr2 42776760 42776855 -210479728 - L1MA4 LINE L1 -9 6291 6196 189 367 42 17 chr2 42777658 42777778 -210478805 + L2 LINE L2 2922 3044 -228 194 299 51 43 chr2 42778018 42778135 -210478448 + L3 LINE CR1 630 747 -830 201 192 14 41 chr2 42778479 42778552 -210478031 + CT-rich Low_complexity Low_complexity 3 73 0 222 37 0 0 chr2 42778570 42778597 -210477986 + (CA)n Simple_repeat Simple_repeat 2 28 0 2340 127 31 6 chr2 42778601 42778955 -210477628 + THE1B LTR MaLR 2 364 0 10443 110 12 12 chr2 42778955 42780469 -210476114 + THE1B-int LTR MaLR 1 1514 -66 2086 143 53 6 chr2 42780483 42780825 -210475758 + THE1B LTR MaLR 4 361 -3 180 111 0 0 chr2 42780825 42780852 -210475731 + (CA)n Simple_repeat Simple_repeat 2 28 0 21 0 0 0 chr2 42780990 42781011 -210475572 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr2 42781253 42781283 -210475300 + AT_rich Low_complexity Low_complexity 1 30 0 261 0 0 0 chr2 42781696 42781725 -210474858 + (CA)n Simple_repeat Simple_repeat 2 30 0 1835 114 8 0 chr2 42782476 42782739 -210473844 + AluSp SINE Alu 45 309 -4 296 298 114 32 chr2 42782847 42783005 -210473578 - MIR SINE MIR -73 189 19 10619 61 4 0 chr2 42783327 42785454 -210471129 - L1PA6 LINE L1 -3 6151 4018 19424 83 2 5 chr2 42785455 42788156 -210468427 + L1PA6 LINE L1 1353 4045 -2101 215 261 67 126 chr2 42788252 42788371 -210468212 + MIR SINE MIR 40 151 -57 24 0 0 0 chr2 42788703 42788727 -210467856 + AT_rich Low_complexity Low_complexity 1 24 0 1512 219 70 38 chr2 42788946 42789416 -210467167 + MLT1D LTR MaLR 21 505 0 25 31 0 0 chr2 42789532 42789564 -210467019 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr2 42789620 42789642 -210466941 + AT_rich Low_complexity Low_complexity 1 22 0 315 0 0 0 chr2 42789652 42789687 -210466896 + (CA)n Simple_repeat Simple_repeat 2 36 0 208 312 14 80 chr2 42791364 42791502 -210465081 - MIR SINE MIR -93 169 41 594 41 0 0 chr2 42792566 42792639 -210463944 + (TA)n Simple_repeat Simple_repeat 1 73 0 788 303 34 43 chr2 42794741 42795348 -210461235 - L1MEc LINE L1 -3568 2647 2082 450 0 0 0 chr2 42796367 42796417 -210460166 + (TG)n Simple_repeat Simple_repeat 1 50 0 292 351 17 17 chr2 42796942 42797116 -210459467 + MARNA DNA Mariner 132 305 -281 248 325 85 58 chr2 42797442 42797630 -210458953 + L2 LINE L2 3080 3272 0 546 382 4 4 chr2 42798841 42799066 -210457517 + MIR SINE MIR 20 244 -18 500 265 4 80 chr2 42799139 42799377 -210457206 - L1ME1 LINE L1 -69 6097 5878 * 2901 281 41 34 chr2 42799355 42799749 -210456834 - L1MEc LINE L1 -4358 2038 1649 1302 184 0 93 chr2 42799749 42800092 -210456491 - AluY SINE Alu 0 311 1 2901 281 41 34 chr2 42800092 42801126 -210455457 - L1MEc LINE L1 -4747 1649 599 1515 217 25 6 chr2 42801299 42801613 -210454970 - MER2 DNA MER2_type -23 322 3 5275 227 81 52 chr2 42801660 42803989 -210452594 - L1MDa LINE L1 -3890 2650 48 561 292 71 40 chr2 42804006 42804232 -210452351 - L1MEc LINE L1 -5803 593 361 522 273 26 7 chr2 42804284 42804438 -210452145 - L1MEc LINE L1 -6133 263 107 307 252 78 26 chr2 42805945 42806060 -210450523 + MER103 DNA DNA 26 146 -20 757 230 13 39 chr2 42806264 42806494 -210450089 + MLT1H LTR MaLR 21 244 -305 250 291 100 9 chr2 42806534 42806644 -210449939 + MLT1H LTR MaLR 338 457 -98 194 0 0 37 chr2 42806692 42806719 -210449864 + (TTTTTG)n Simple_repeat Simple_repeat 3 28 0 228 143 0 0 chr2 42807804 42807846 -210448737 + (CA)n Simple_repeat Simple_repeat 1 42 0 486 290 70 38 chr2 42808079 42808389 -210448194 - MLT1H LTR MaLR -185 364 1 246 54 0 0 chr2 42808500 42808537 -210448046 - L1MA3 LINE L1 0 6305 6269 185 354 61 20 chr2 42808564 42808663 -210447920 + L2 LINE L2 3211 3313 0 596 256 6 37 chr2 42808864 42809028 -210447555 + MER58B DNA MER1_type 177 335 -6 305 178 22 56 chr2 42809072 42809162 -210447421 - L1MCa LINE L1 -4345 2081 1995 200 194 10 31 chr2 42809170 42809268 -210447315 + (TA)n Simple_repeat Simple_repeat 1 96 0 291 242 73 57 chr2 42809390 42809514 -210447069 - MIR SINE MIR -4 258 133 7280 46 2 0 chr2 42810557 42812021 -210444562 + L1PA4 LINE L1 4692 6153 -2 190 308 31 0 chr2 42812092 42812157 -210444426 - MIR SINE MIR -12 250 184 187 234 130 26 chr2 42813952 42813964 -210442619 + L3 LINE CR1 667 676 -901 7497 139 18 25 chr2 42813964 42815270 -210441313 + HSMAR2 DNA Mariner 4 1300 -2 187 234 130 26 chr2 42815270 42815334 -210441249 + L3 LINE CR1 676 751 -826 391 343 61 14 chr2 42816266 42816511 -210440072 - MIR SINE MIR 0 262 7 7568 35 1 0 chr2 42817393 42819059 -210437524 - L1PA3 LINE L1 -5 6150 4475 847 260 60 21 chr2 42820578 42820863 -210435720 + L1MD2 LINE L1 6050 6345 -14 293 114 58 37 chr2 42820938 42821184 -210435399 + (TA)n Simple_repeat Simple_repeat 1 251 0 1263 240 21 13 chr2 42821307 42821684 -210434899 + L1ME2 LINE L1 5298 5678 -481 11803 101 7 3 chr2 42821684 42824173 -210432410 + L1PA7 LINE L1 3664 6154 0 1146 232 45 17 chr2 42824288 42824646 -210431937 + L1ME2 LINE L1 5677 6044 -120 1719 148 7 11 chr2 42824845 42825151 -210431432 + AluSx SINE Alu 9 313 0 309 268 19 70 chr2 42825151 42825308 -210431275 + L1M4 LINE L1 4505 4653 -1493 325 269 53 34 chr2 42825325 42825533 -210431050 + L1M4 LINE L1 4795 5006 -1140 569 294 60 0 chr2 42826655 42826839 -210429744 + L1ME LINE L1 35 229 -6167 1493 243 39 74 chr2 42826846 42827485 -210429098 + L1ME LINE L1 304 920 -5476 369 325 15 66 chr2 42827493 42827690 -210428893 - L1MEc LINE L1 -5122 1274 1088 1206 222 186 11 chr2 42827710 42828080 -210428503 - MLT1C LTR MaLR -15 452 18 2880 191 40 11 chr2 42828319 42828931 -210427652 - MER39 LTR ERV1 -35 672 3 1251 236 82 64 chr2 42829675 42830226 -210426357 + MER34C LTR ERV1 1 564 -21 2207 197 45 94 chr2 42830226 42830952 -210425631 + LTR8 LTR ERV1 1 691 0 1251 236 82 64 chr2 42830952 42830975 -210425608 + MER34C LTR ERV1 564 585 0 2723 176 45 12 chr2 42831209 42831715 -210424868 - LTR45 LTR ERV1 -2 523 1 2799 181 23 4 chr2 42831861 42832387 -210424196 + MER34B LTR ERV1 1 536 -29 21 36 0 0 chr2 42832543 42832571 -210424012 + AT_rich Low_complexity Low_complexity 1 28 0 1678 189 3 10 chr2 42832705 42833002 -210423581 + AluJb SINE Alu 1 295 -17 813 239 65 26 chr2 42833215 42833445 -210423138 + LTR16B LTR ERVL 222 460 -4 189 215 25 25 chr2 42833486 42833565 -210423018 + GA-rich Low_complexity Low_complexity 3 81 0 1116 287 96 9 chr2 42834843 42835540 -210421043 + L1ME LINE L1 4556 5313 -833 447 245 52 0 chr2 42835548 42835740 -210420843 + L1ME LINE L1 5283 5484 -678 421 236 171 0 chr2 42835754 42835894 -210420689 + L1MC4 LINE L1 7753 7916 -126 255 273 73 9 chr2 42835988 42836098 -210420485 + L1MC4 LINE L1 7926 8042 0 304 298 128 24 chr2 42836103 42836683 -210419900 + L1ME LINE L1 2355 2994 -3221 369 323 91 25 chr2 42836822 42837218 -210419365 + L1ME LINE L1 3795 4216 -1999 23 0 0 0 chr2 42837404 42837427 -210419156 + AT_rich Low_complexity Low_complexity 1 23 0 316 243 99 9 chr2 42837435 42837546 -210419037 + L1ME3A LINE L1 6041 6161 -9 2147 128 0 6 chr2 42838007 42838319 -210418264 + AluSx SINE Alu 3 312 0 473 284 115 29 chr2 42838384 42838622 -210417961 + L1ME LINE L1 4996 5212 -1019 1923 101 3 60 chr2 42838622 42838940 -210417643 + AluSc SINE Alu 3 302 -7 473 284 115 29 chr2 42838940 42839517 -210417066 + L1ME LINE L1 5212 5890 -341 289 252 23 84 chr2 42840212 42840343 -210416240 + L3 LINE CR1 1326 1448 -129 30 45 0 0 chr2 42840510 42840554 -210416029 + AT_rich Low_complexity Low_complexity 1 44 0 4586 140 18 27 chr2 42840736 42841517 -210415066 - L1PA12 LINE L1 -3 6165 5392 255 289 44 0 chr2 42841925 42842039 -210414544 - L1MC4a LINE L1 -1882 5926 5808 310 273 79 104 chr2 42842181 42842426 -210414157 + L1MEc LINE L1 810 1060 -5336 7932 80 4 6 chr2 42842426 42843499 -210413084 - MER11C LTR ERVK 0 1071 1 310 273 79 104 chr2 42843499 42844177 -210412406 + L1MEc LINE L1 1060 1710 -4686 260 232 78 99 chr2 42844346 42844630 -210411953 + L1MEc LINE L1 2984 3261 -2954 242 250 36 12 chr2 42844778 42844862 -210411721 + Charlie5 DNA MER1_type 25 110 -2502 21 0 0 0 chr2 42844882 42844903 -210411680 + AT_rich Low_complexity Low_complexity 1 21 0 2092 203 87 31 chr2 42844919 42845460 -210411123 - L1MC3 LINE L1 -8 7777 7207 1977 136 27 0 chr2 42845958 42846253 -210410330 + AluSx SINE Alu 1 303 -9 1697 132 31 0 chr2 42846531 42846818 -210409765 + L1MA5 LINE L1 6000 6295 -5 204 40 0 0 chr2 42847619 42847644 -210408939 + (GA)n Simple_repeat Simple_repeat 1 25 0 677 308 156 11 chr2 42847743 42848185 -210408398 - L2 LINE L2 0 3313 2808 3273 147 9 40 chr2 42848559 42849129 -210407454 + MLT2B3 LTR ERVL 1 552 -2 193 324 73 0 chr2 42849206 42849274 -210407309 + L2 LINE L2 3197 3269 -3 265 235 74 74 chr2 42849738 42849900 -210406683 - L2 LINE L2 -50 3263 3102 938 228 111 66 chr2 42850332 42850709 -210405874 + MLT1D LTR MaLR 46 439 -66 2264 120 0 0 chr2 42850740 42851040 -210405543 - AluSx SINE Alu -12 300 1 227 176 0 39 chr2 42851070 42851121 -210405462 + MLT1D LTR MaLR 578 626 0 386 226 57 16 chr2 42852307 42852431 -210404152 + LTR16A1 LTR ERVL 18 146 -311 399 287 69 35 chr2 42852513 42852687 -210403896 + LTR16A1 LTR ERVL 266 445 -12 487 280 76 14 chr2 42853104 42853315 -210403268 + LTR33A LTR ERVL 273 496 -27 22 0 0 0 chr2 42854073 42854095 -210402488 + AT_rich Low_complexity Low_complexity 1 22 0 346 355 85 20 chr2 42854945 42855193 -210401390 + L2 LINE L2 2810 3073 -199 1976 152 133 5 chr2 42855319 42855688 -210400895 - MSTA LTR MaLR 0 428 13 3999 118 62 10 chr2 42855688 42856313 -210400270 - THE1C-int LTR MaLR -922 658 1 1689 165 37 40 chr2 42856313 42856689 -210399894 - THE1C LTR MaLR 0 375 1 476 113 0 78 chr2 42856689 42856809 -210399774 + L1M2 LINE L1 5582 5686 -465 1148 270 84 26 chr2 42856931 42857549 -210399034 - HsTC2c DNA Tc2 -3 726 3 1536 172 0 18 chr2 42857718 42857997 -210398586 + AluJb SINE Alu 35 308 -4 2180 88 0 39 chr2 42858346 42858651 -210397932 - AluSc SINE Alu -16 293 1 584 319 64 13 chr2 42860311 42860546 -210396037 - MIR SINE MIR -13 249 3 1547 135 0 4 chr2 42864035 42864280 -210392303 + L1MA9 LINE L1 5992 6235 -77 850 188 0 0 chr2 42864283 42864421 -210392162 - Tigger3(Golem) DNA MER2_type 0 3035 2898 1658 169 10 16 chr2 42865680 42865987 -210390596 + AluJo SINE Alu 1 305 -7 2081 136 3 0 chr2 42866828 42867137 -210389446 + AluSq SINE Alu 1 310 -3 342 268 69 104 chr2 42868146 42868493 -210388090 + MLT1J LTR MaLR 123 457 -54 25 65 0 0 chr2 42869062 42869108 -210387475 + AT_rich Low_complexity Low_complexity 1 46 0 990 184 53 60 chr2 42869422 42869688 -210386895 + AluJo SINE Alu 49 312 0 391 257 46 46 chr2 42869888 42870063 -210386520 + MER5B DNA MER1_type 4 178 0 273 353 66 7 chr2 42870302 42870438 -210386145 + L2 LINE L2 3121 3264 -8 219 333 126 0 chr2 42870552 42870663 -210385920 - L2 LINE L2 0 3313 3189 2867 182 25 7 chr2 42872615 42873165 -210383418 + L1MC3 LINE L1 7218 7777 -8 871 246 55 67 chr2 42873404 42873734 -210382849 + L2 LINE L2 2988 3313 0 218 271 112 9 chr2 42874935 42875042 -210381541 - L2 LINE L2 -1 3312 3195 284 358 122 25 chr2 42875322 42876054 -210380529 - L2 LINE L2 -1129 2185 1383 505 364 37 12 chr2 42877259 42877501 -210379082 + MIR SINE MIR 1 248 -14 875 294 50 31 chr2 42877789 42878425 -210378158 - L1M4 LINE L1 -801 5345 4698 183 304 72 0 chr2 42878438 42878507 -210378076 + L2 LINE L2 2439 2512 -802 1763 169 14 0 chr2 42879160 42879450 -210377133 - AluSx SINE Alu -18 294 1 585 288 109 48 chr2 42881010 42881340 -210375243 - L3 LINE CR1 -428 1149 800 679 271 102 36 chr2 42881588 42881920 -210374663 - L3 LINE CR1 -797 780 427 1916 123 0 0 chr2 42881978 42882247 -210374336 - AluSq SINE Alu 0 313 45 497 274 26 0 chr2 42882752 42882865 -210373718 - FLAM_A SINE Alu -17 116 1 311 267 0 13 chr2 42883099 42883174 -210373409 + MIR3 SINE MIR 114 187 -21 252 325 26 51 chr2 42883189 42883306 -210373277 + L2 LINE L2 3148 3261 -11 * 731 264 238 17 chr2 42883279 42883970 -210372613 - L2 LINE L2 0 3313 2451 1673 25 10 0 chr2 42883970 42884174 -210372409 - L1PA4 LINE L1 -2 6153 5948 799 50 0 0 chr2 42884174 42884275 -210372308 + L1PA4 LINE L1 5854 5954 -201 489 239 123 0 chr2 42884276 42884406 -210372177 - L2 LINE L2 -854 2460 2315 28 79 0 0 chr2 42884843 42884906 -210371677 + AT_rich Low_complexity Low_complexity 1 63 0 224 284 23 11 chr2 42885002 42885090 -210371493 + (TATG)n Simple_repeat Simple_repeat 4 92 0 24 0 0 0 chr2 42885233 42885257 -210371326 + AT_rich Low_complexity Low_complexity 1 24 0 234 362 0 0 chr2 42886266 42886371 -210370212 + (TGG)n Simple_repeat Simple_repeat 1 105 0 2781 10 0 0 chr2 42886890 42887195 -210369388 - AluYa5 SINE Alu -6 305 1 23 0 0 0 chr2 42887256 42887279 -210369304 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 42887540 42887561 -210369022 + AT_rich Low_complexity Low_complexity 1 21 0 2216 95 7 0 chr2 42888134 42888429 -210368154 - AluY SINE Alu -14 297 1 1662 224 37 67 chr2 42888911 42889419 -210367164 - MLT1D LTR MaLR -12 493 1 405 255 176 20 chr2 42890878 42891031 -210365552 + MER5A DNA MER1_type 7 183 -6 276 146 18 0 chr2 42891381 42891436 -210365147 - L1MA6 LINE L1 0 6300 6245 1007 283 177 15 chr2 42891606 42892620 -210363963 - L1MEc LINE L1 -3215 3000 1835 918 120 0 0 chr2 42892801 42892934 -210363649 - THE1B LTR MaLR 0 364 232 26 50 0 0 chr2 42893149 42893189 -210363394 + AT_rich Low_complexity Low_complexity 1 40 0 653 197 8 8 chr2 42893189 42893316 -210363267 - FRAM SINE Alu -49 127 1 322 309 41 0 chr2 42893698 42893795 -210362788 + L3 LINE CR1 1476 1576 -1 236 401 103 8 chr2 42894964 42895363 -210361220 - LTR67 LTR ERVL -85 472 36 804 186 0 0 chr2 42895446 42895575 -210361008 + FLAM_C SINE Alu 1 129 -4 191 335 46 64 chr2 42896779 42896952 -210359631 + MIR SINE MIR 29 198 -64 25 0 0 0 chr2 42897372 42897397 -210359186 + AT_rich Low_complexity Low_complexity 1 25 0 273 297 27 45 chr2 42898103 42898150 -210358433 - MIR3 SINE MIR -8 200 154 1137 233 5 0 chr2 42898150 42898373 -210358210 - MER58A DNA MER1_type 0 224 1 273 297 27 45 chr2 42898373 42898436 -210358147 - MIR3 SINE MIR -54 154 92 1611 237 44 50 chr2 42898520 42899064 -210357519 + LTR55 LTR ERV 1 541 -7 265 220 0 17 chr2 42899634 42899693 -210356890 + MLT1-int LTR MaLR 5 62 -1309 803 264 67 0 chr2 42900901 42901219 -210355364 - L1ME2 LINE L1 -334 5830 5537 459 290 103 50 chr2 42901316 42901675 -210354908 + L1M4 LINE L1 4288 4665 -1481 198 0 0 0 chr2 42901923 42901945 -210354638 + (GGGAGA)n Simple_repeat Simple_repeat 4 25 0 25 31 0 0 chr2 42901945 42901977 -210354606 + AT_rich Low_complexity Low_complexity 1 32 0 408 40 0 0 chr2 42902333 42902383 -210354200 + (TAGA)n Simple_repeat Simple_repeat 3 52 0 212 364 11 0 chr2 42902416 42902504 -210354079 - MIR SINE MIR -122 140 52 21 0 0 0 chr2 42902707 42902728 -210353855 + AT_rich Low_complexity Low_complexity 1 21 0 1690 156 32 3 chr2 42902931 42903253 -210353330 + AluSx SINE Alu 1 312 0 224 348 31 11 chr2 42903665 42903763 -210352820 + MIR SINE MIR 42 140 -91 1897 150 10 22 chr2 42904347 42904661 -210351922 + AluSx SINE Alu 1 310 -2 524 124 9 26 chr2 42904669 42904782 -210351801 + (GAA)n Simple_repeat Simple_repeat 1 111 0 188 294 65 54 chr2 42905021 42905113 -210351470 - MER5B DNA MER1_type -2 176 84 8689 151 20 15 chr2 42906038 42908408 -210348175 - L1PA11 LINE L1 0 6174 3781 319 228 25 0 chr2 42908923 42909002 -210347581 - MER5A DNA MER1_type -80 109 29 663 211 0 6 chr2 42909136 42909297 -210347286 + L1M4c LINE L1 1074 1233 -5151 1641 166 163 17 chr2 42909328 42909689 -210346894 + MSTA LTR MaLR 1 414 -14 1578 224 36 58 chr2 42909696 42910218 -210346365 + L1 LINE L1 3724 4234 -1912 3851 136 43 18 chr2 42910768 42911444 -210345139 - L1PA16 LINE L1 -9 6157 5465 251 330 48 73 chr2 42911584 42911790 -210344793 + MIR SINE MIR 15 215 -47 1301 268 100 5 chr2 42911801 42912170 -210344413 - LTR16C LTR ERVL 0 491 88 236 327 206 22 chr2 42912520 42912884 -210343699 + L2 LINE L2 1810 2240 -1074 354 61 0 0 chr2 42913631 42913680 -210342903 + (CA)n Simple_repeat Simple_repeat 2 50 0 225 94 0 0 chr2 42913680 42913712 -210342871 + (GA)n Simple_repeat Simple_repeat 1 32 0 35 0 0 0 chr2 42914012 42914047 -210342536 + AT_rich Low_complexity Low_complexity 1 35 0 220 380 14 56 chr2 42915706 42915848 -210340735 + L2 LINE L2 3137 3272 0 317 283 0 67 chr2 42917253 42917373 -210339210 + MIR SINE MIR 32 143 -119 343 265 75 118 chr2 42918166 42918428 -210338155 - HAL1b LINE L1 -7 1341 1098 512 89 0 25 chr2 42918428 42918507 -210338076 + L1PA13 LINE L1 6085 6161 -2 343 265 75 118 chr2 42918507 42918617 -210337966 - HAL1b LINE L1 -250 1098 985 471 74 62 25 chr2 42918802 42918883 -210337700 + L1PA13 LINE L1 6080 6163 0 511 249 127 77 chr2 42919047 42919425 -210337158 - HAL1b LINE L1 -621 727 331 267 31 0 0 chr2 42920432 42920464 -210336119 + (CA)n Simple_repeat Simple_repeat 1 32 0 185 217 43 22 chr2 42920572 42920618 -210335965 - L3 LINE CR1 -1088 489 443 250 179 194 30 chr2 42921126 42921193 -210335390 + L2 LINE L2 3235 3312 -1 267 301 0 0 chr2 42921238 42921311 -210335272 - MIR SINE MIR -109 153 81 285 347 40 55 chr2 42921364 42921690 -210334893 - MLT1K LTR MaLR -86 502 182 422 208 0 123 chr2 42921754 42921884 -210334699 - MER81 DNA DNA 0 114 1 204 143 0 0 chr2 42921969 42922011 -210334572 + (TA)n Simple_repeat Simple_repeat 2 43 0 204 299 28 47 chr2 42922759 42922866 -210333717 + MER5A DNA MER1_type 40 144 -45 187 386 31 8 chr2 42922886 42923013 -210333570 - MER5B DNA MER1_type -24 154 25 246 32 0 0 chr2 42923982 42924013 -210332570 + (CA)n Simple_repeat Simple_repeat 2 32 0 197 329 53 0 chr2 42924525 42924601 -210331982 + L2 LINE L2 3148 3227 -86 2412 108 0 3 chr2 42924974 42925318 -210331265 + L1PA14 LINE L1 5691 6033 -128 289 326 23 16 chr2 42925347 42925476 -210331107 + MLT1L LTR MaLR 194 323 -292 2324 147 52 2 chr2 42925544 42925952 -210330631 - MSTA LTR MaLR 0 428 1 326 301 96 29 chr2 42926073 42926229 -210330354 + MIR SINE MIR 34 197 -64 251 402 16 0 chr2 42926247 42926369 -210330214 - L2 LINE L2 0 3272 3149 236 224 15 0 chr2 42926469 42926536 -210330047 + (TA)n Simple_repeat Simple_repeat 2 69 0 407 211 39 10 chr2 42927583 42927687 -210328896 + L1ME4a LINE L1 5969 6075 -46 28 0 0 0 chr2 42930024 42930052 -210326531 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr2 42930072 42930103 -210326480 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr2 42931894 42931916 -210324667 + AT_rich Low_complexity Low_complexity 1 22 0 261 353 39 10 chr2 42932188 42932290 -210324293 - MIR SINE MIR -157 105 1 225 175 0 0 chr2 42932628 42932668 -210323915 + CT-rich Low_complexity Low_complexity 1 40 0 215 190 17 0 chr2 42933840 42933898 -210322685 + (TG)n Simple_repeat Simple_repeat 2 60 0 224 326 7 96 chr2 42934483 42934618 -210321965 - MIR3 SINE MIR -46 162 40 1323 283 79 135 chr2 42934749 42936374 -210320209 - L2 LINE L2 -4 3309 1790 479 222 82 15 chr2 42936538 42936673 -210319910 - L2 LINE L2 -1995 1319 1176 273 254 99 0 chr2 42936699 42936770 -210319813 - MIR SINE MIR -174 88 11 217 329 72 13 chr2 42936858 42937010 -210319573 + L2 LINE L2 2246 2406 -908 276 30 0 0 chr2 42937213 42937246 -210319337 + (CA)n Simple_repeat Simple_repeat 2 34 0 299 155 0 17 chr2 42937249 42937307 -210319276 + MLT1E3 LTR MaLR 566 622 -2 201 356 19 3 chr2 42937366 42937476 -210319107 + MIR SINE MIR 33 144 -64 343 241 106 14 chr2 42937802 42937943 -210318640 - L1M4 LINE L1 -3776 2370 2217 4820 140 56 29 chr2 42937951 42938974 -210317609 - L1MA6 LINE L1 -46 6254 5204 4042 61 72 34 chr2 42938974 42939560 -210317023 + LTR14B LTR ERVK 1 608 0 4820 140 56 29 chr2 42939560 42939592 -210316991 - L1MA6 LINE L1 -1096 5204 5174 296 175 41 0 chr2 42939821 42939918 -210316665 + (TA)n Simple_repeat Simple_repeat 2 102 0 29 47 0 0 chr2 42939936 42939979 -210316604 + AT_rich Low_complexity Low_complexity 1 43 0 242 388 77 6 chr2 42940039 42940222 -210316361 - L3b LINE CR1 0 1583 1388 311 207 42 22 chr2 42940620 42940712 -210315871 - MLT1F LTR MaLR -16 526 436 679 279 53 4 chr2 42941088 42941314 -210315269 - MIR SINE MIR -14 248 12 285 306 25 87 chr2 42942929 42943125 -210313458 + L2 LINE L2 2362 2545 -769 360 0 0 0 chr2 42943146 42943186 -210313397 + (TAA)n Simple_repeat Simple_repeat 3 42 0 5853 155 15 11 chr2 42943338 42943697 -210312886 - L1PB2 LINE L1 -1 6150 5794 288 0 0 0 chr2 42943697 42943729 -210312854 + (TG)n Simple_repeat Simple_repeat 2 33 0 * 393 22 0 0 chr2 42943728 42943774 -210312809 + (TAGA)n Simple_repeat Simple_repeat 1 46 0 5853 155 15 11 chr2 42943729 42945415 -210311168 - L1PB2 LINE L1 -357 5794 4151 295 333 50 44 chr2 42945484 42945664 -210310919 + L2 LINE L2 2723 2903 -411 253 195 13 26 chr2 42945665 42945742 -210310841 + CT-rich Low_complexity Low_complexity 4 79 0 2145 254 74 11 chr2 42945924 42946448 -210310135 + MLT1F1 LTR MaLR 11 567 0 22 0 0 0 chr2 42946496 42946518 -210310065 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 42947318 42947340 -210309243 + AT_rich Low_complexity Low_complexity 1 22 0 760 195 72 81 chr2 42947856 42948037 -210308546 - MER20 DNA MER1_type 0 219 39 739 193 44 6 chr2 42948037 42948218 -210308365 + MER53 DNA DNA 2 189 0 760 195 72 81 chr2 42948218 42948257 -210308326 - MER20 DNA MER1_type -180 39 1 428 310 132 50 chr2 42948934 42949253 -210307330 + L2 LINE L2 2171 2515 -799 207 204 0 0 chr2 42949389 42949438 -210307145 + (TG)n Simple_repeat Simple_repeat 1 49 0 26 0 0 0 chr2 42949775 42949801 -210306782 + AT_rich Low_complexity Low_complexity 1 26 0 1073 186 27 9 chr2 42950132 42950352 -210306231 + L1MC1 LINE L1 6110 6333 0 6191 154 8 28 chr2 42950545 42950830 -210305753 + L1PA8A LINE L1 227 516 -5945 2183 125 3 0 chr2 42950830 42951141 -210305442 + AluSx SINE Alu 1 312 0 6191 154 8 28 chr2 42951141 42952920 -210303663 + L1PA8A LINE L1 516 2629 -3832 1172 111 19 87 chr2 42952964 42953171 -210303412 - L1P3 LINE L1 -5671 204 12 10257 118 6 29 chr2 42953171 42955506 -210301077 + L1PA8A LINE L1 4125 6445 -1 330 325 8 8 chr2 42956162 42956279 -210300304 + L2 LINE L2 2130 2246 -1068 1385 260 89 50 chr2 42956459 42957003 -210299580 + L1MEc LINE L1 45 566 -5830 872 264 14 0 chr2 42957003 42957219 -210299364 + MER20 DNA MER1_type 1 219 0 1385 260 89 50 chr2 42957219 42957619 -210298964 + L1MEc LINE L1 566 1076 -5320 2140 128 3 0 chr2 42957619 42957925 -210298658 + AluSg SINE Alu 1 307 -3 1385 260 89 50 chr2 42957925 42958021 -210298562 + L1MEc LINE L1 1076 1167 -5229 33 0 0 0 chr2 42958228 42958261 -210298322 + AT_rich Low_complexity Low_complexity 1 33 0 511 284 37 61 chr2 42958280 42958646 -210297937 + L1MEc LINE L1 1148 1666 -4730 * 10769 195 45 10 chr2 42958640 42961063 -210295520 - L1MA4 LINE L1 -914 5232 2724 5182 165 32 8 chr2 42961064 42962065 -210294518 + L1MA4 LINE L1 5254 6278 -22 966 167 36 23 chr2 42962083 42962423 -210294160 + L1MEc LINE L1 1626 5427 -796 370 210 84 28 chr2 42962418 42962561 -210294022 + L1M4 LINE L1 3174 3324 -2822 * 2962 242 78 80 chr2 42962656 42963793 -210292790 + L1M3 LINE L1 72 1242 -5404 1638 201 17 0 chr2 42963793 42964087 -210292496 + AluJb SINE Alu 3 301 -11 2962 242 78 80 chr2 42964087 42965026 -210291557 + L1M3 LINE L1 1242 2181 -4465 357 219 189 6 chr2 42965043 42965207 -210291376 + L1M3 LINE L1 2299 2492 -4154 * 1470 212 139 42 chr2 42965180 42965207 -210291376 + L1M3 LINE L1 5781 5804 -874 1876 124 0 0 chr2 42965207 42965473 -210291110 + AluSx SINE Alu 34 299 -13 1470 212 139 42 chr2 42965473 42965593 -210290990 + L1M3 LINE L1 5804 5911 -767 2465 114 3 16 chr2 42965593 42965962 -210290621 - THE1B LTR MaLR 0 364 1 1470 212 139 42 chr2 42965962 42966265 -210290318 + L1M3 LINE L1 5911 6276 -402 * 6675 248 62 34 chr2 42966262 42967221 -210289362 - L1 LINE L1 -2218 3816 2885 1761 142 71 0 chr2 42967221 42967489 -210289094 + AluSx SINE Alu 1 287 -25 6675 248 62 34 chr2 42967489 42968401 -210288182 - L1 LINE L1 -3149 2885 2000 1129 43 0 0 chr2 42968401 42968541 -210288042 - L1PA8 LINE L1 -6 6166 6027 6675 248 62 34 chr2 42968541 42969364 -210287219 - L1 LINE L1 -4034 2000 1202 1398 218 0 35 chr2 42969364 42969680 -210286903 - AluJo SINE Alu -7 305 1 6675 248 62 34 chr2 42969680 42970690 -210285893 - L1 LINE L1 -4832 1202 318 1753 298 24 11 chr2 42970774 42971333 -210285250 - L1M3a LINE L1 -5212 743 2 25 31 0 0 chr2 42971419 42971451 -210285132 + AT_rich Low_complexity Low_complexity 1 32 0 1885 138 7 0 chr2 42974130 42974406 -210282177 + AluY SINE Alu 1 278 -33 26 0 0 0 chr2 42974406 42974432 -210282151 + AT_rich Low_complexity Low_complexity 1 26 0 301 280 64 55 chr2 42974504 42974740 -210281843 - L1MEc LINE L1 -4445 1951 1714 1237 275 96 54 chr2 42974828 42975381 -210281202 - L2 LINE L2 -902 2412 1837 210 71 0 0 chr2 42975905 42975933 -210280650 + (TC)n Simple_repeat Simple_repeat 2 29 0 22 35 0 0 chr2 42976447 42976476 -210280107 + AT_rich Low_complexity Low_complexity 1 29 0 182 170 0 43 chr2 42977257 42977304 -210279279 + (TATG)n Simple_repeat Simple_repeat 3 47 0 350 341 7 30 chr2 42977593 42977728 -210278855 - MIR3 SINE MIR -5 203 72 272 342 26 53 chr2 42977976 42978128 -210278455 + MLT1K LTR MaLR 8 155 -433 703 142 0 13 chr2 42978628 42978783 -210277800 + (GGGA)n Simple_repeat Simple_repeat 3 155 0 1727 179 15 80 chr2 42978795 42979197 -210277386 + MLT1B LTR MaLR 15 390 0 183 80 0 0 chr2 42979199 42979224 -210277359 + (A)n Simple_repeat Simple_repeat 1 25 0 999 292 86 28 chr2 42979245 42979677 -210276906 - MLT1C LTR MaLR -5 462 6 3246 161 65 3 chr2 42979949 42980546 -210276037 - L1PA16 LINE L1 -9 6157 5524 21 89 0 0 chr2 42980713 42980769 -210275814 + AT_rich Low_complexity Low_complexity 1 56 0 2465 81 0 0 chr2 42982117 42982426 -210274157 - AluY SINE Alu -2 309 1 5795 146 7 32 chr2 42983827 42985175 -210271408 + L1PA16 LINE L1 4842 6157 -9 2087 191 54 92 chr2 42985817 42986468 -210270115 + MLT1E2 LTR MaLR 1 626 0 36 23 0 0 chr2 42986798 42986841 -210269742 + AT_rich Low_complexity Low_complexity 1 43 0 279 353 65 5 chr2 42986881 42987057 -210269526 + MIR3 SINE MIR 21 204 -32 302 365 76 14 chr2 42988324 42988535 -210268048 + HAL1b LINE L1 682 905 -443 321 320 29 10 chr2 42989552 42989655 -210266928 - MLT1J LTR MaLR -167 344 240 210 71 0 0 chr2 42989778 42989806 -210266777 + (T)n Simple_repeat Simple_repeat 1 28 0 431 295 195 9 chr2 42990544 42990754 -210265829 + MIR SINE MIR 14 262 0 231 185 0 37 chr2 42991760 42991841 -210264742 + CT-rich Low_complexity Low_complexity 3 80 0 180 0 0 0 chr2 42991962 42991982 -210264601 + (TTC)n Simple_repeat Simple_repeat 3 22 0 678 334 126 12 chr2 42992285 42992830 -210263753 - L2 LINE L2 -62 3251 2646 449 303 107 30 chr2 42993468 42993702 -210262881 + MIR SINE MIR 7 258 -4 27 29 0 0 chr2 42993744 42993778 -210262805 + AT_rich Low_complexity Low_complexity 1 34 0 385 285 114 14 chr2 42994039 42994192 -210262391 + MIR SINE MIR 37 204 -58 23 0 0 0 chr2 42995025 42995048 -210261535 + AT_rich Low_complexity Low_complexity 1 23 0 868 257 28 9 chr2 42995518 42995736 -210260847 + MER58A DNA MER1_type 1 222 -2 649 307 158 37 chr2 42995835 42996291 -210260292 - LTR33 LTR ERVL -10 511 1 598 346 107 54 chr2 42996704 42997469 -210259114 + L2 LINE L2 2432 3251 -21 302 240 170 10 chr2 42997616 42997716 -210258867 + LTR50 LTR ERVL 88 203 -592 555 244 81 35 chr2 42997744 42997941 -210258642 - L1MA10 LINE L1 -18 6316 6111 1143 307 89 35 chr2 42997989 42998252 -210258331 + ERVL LTR ERVL 4441 4688 -1076 1977 202 33 76 chr2 42998252 42998831 -210257752 + MLT2B3 LTR ERVL 1 554 0 1143 307 89 35 chr2 42998831 42999118 -210257465 + ERVL LTR ERVL 4688 5021 -743 259 230 54 0 chr2 42999775 42999849 -210256734 + LTR50 LTR ERVL 1 78 -717 1041 217 188 5 chr2 42999851 43000219 -210256364 - MER63B DNA MER1_type 0 436 2 234 286 191 42 chr2 43000245 43000413 -210256170 + LTR50 LTR ERVL 105 297 -498 6344 154 29 4 chr2 43000499 43001594 -210254989 - Tigger1 DNA MER2_type -1 2417 1295 13842 33 0 0 chr2 43001594 43003250 -210253333 - L1PA4 LINE L1 -1064 5082 3427 7247 40 5 0 chr2 43003250 43004313 -210252270 + L1PA4 LINE L1 5086 6152 -3 8240 134 22 4 chr2 43004325 43005587 -210250996 - Tigger1 DNA MER2_type -1108 1310 26 21 0 0 0 chr2 43005889 43005910 -210250673 + AT_rich Low_complexity Low_complexity 1 21 0 225 108 0 0 chr2 43006140 43006177 -210250406 + (T)n Simple_repeat Simple_repeat 1 37 0 1977 157 27 0 chr2 43006685 43007023 -210249560 - MER7A DNA MER2_type 0 346 2 1732 261 87 44 chr2 43007676 43008917 -210247666 - L1ME1 LINE L1 -50 6911 5607 318 241 11 0 chr2 43008912 43008999 -210247584 - L1ME1 LINE L1 -1833 5108 5021 * 1626 233 39 64 chr2 43008999 43009532 -210247051 + MLT2B1 LTR ERVL 1 520 0 1070 282 92 21 chr2 43009533 43009955 -210246628 + ERVL-B1 LTR ERVL 2 453 -5311 872 111 37 58 chr2 43009956 43010145 -210246438 + L1MA7 LINE L1 5956 6140 -151 399 238 101 21 chr2 43010167 43010356 -210246227 - L1ME1 LINE L1 -2397 4544 4341 254 151 0 38 chr2 43010358 43010411 -210246172 + L1PA16 LINE L1 6107 6157 -9 481 169 12 0 chr2 43010418 43010501 -210246082 - Ricksha DNA DNA -315 2539 2456 735 123 9 0 chr2 43010508 43010622 -210245961 - Ricksha DNA DNA -1139 115 1 368 303 32 60 chr2 43010626 43010773 -210245810 + L1ME LINE L1 5518 5659 -462 2167 108 0 29 chr2 43010773 43011080 -210245503 + AluSp SINE Alu 1 298 -15 368 303 32 60 chr2 43011080 43011150 -210245433 + L1ME LINE L1 5659 5729 -392 200 100 25 0 chr2 43011481 43011521 -210245062 + (TA)n Simple_repeat Simple_repeat 1 41 0 478 250 94 23 chr2 43011565 43011873 -210244710 - L1ME1 LINE L1 -2648 4293 3964 * 596 303 105 22 chr2 43011872 43012187 -210244396 - L1ME1 LINE L1 -4892 1531 1243 3669 126 26 38 chr2 43012187 43012848 -210243735 + MER39B LTR ERV1 1 653 0 596 303 105 22 chr2 43012848 43013532 -210243051 - L1ME1 LINE L1 -5180 1243 795 810 296 46 35 chr2 43013838 43014270 -210242313 - L1ME1 LINE L1 -5961 462 26 639 113 0 57 chr2 43014484 43014608 -210241975 + L1MA8 LINE L1 6170 6286 -5 369 238 56 148 chr2 43015234 43015558 -210241025 - MLT1I LTR MaLR -25 384 98 230 258 0 30 chr2 43017007 43017073 -210239510 + MIR SINE MIR 153 216 -46 2244 110 48 25 chr2 43017146 43017502 -210239081 - THE1B LTR MaLR 0 364 1 11329 103 1 6 chr2 43017502 43019090 -210237493 - THE1B-int LTR MaLR 0 1580 1 2141 119 36 25 chr2 43019090 43019450 -210237133 - THE1B LTR MaLR 0 364 1 1997 126 14 3 chr2 43019565 43019858 -210236725 + AluSg SINE Alu 1 296 -14 394 336 38 0 chr2 43019966 43020097 -210236486 + MIR SINE MIR 8 143 -119 227 326 12 0 chr2 43020654 43020740 -210235843 + MIR SINE MIR 176 262 0 394 352 59 12 chr2 43021110 43021273 -210235310 + L1ME LINE L1 5483 5637 -484 1859 149 3 37 chr2 43021273 43021596 -210234987 + AluSx SINE Alu 1 312 0 394 352 59 12 chr2 43021596 43021753 -210234830 + L1ME LINE L1 5637 5818 -303 575 219 39 28 chr2 43023444 43023622 -210232961 + MLT1C LTR MaLR 148 327 -140 1227 237 38 38 chr2 43023624 43024050 -210232533 - L1M4 LINE L1 -3023 3123 2698 321 274 104 47 chr2 43025596 43025782 -210230801 + MIR SINE MIR 3 196 -66 212 325 121 0 chr2 43027275 43027358 -210229225 + MIR SINE MIR 59 151 -111 236 191 43 0 chr2 43027634 43027680 -210228903 - MER5A DNA MER1_type -71 118 71 225 224 60 15 chr2 43027680 43027747 -210228836 + MER5C DNA MER1_type 1 70 -254 188 328 17 17 chr2 43028102 43028160 -210228423 + MIR SINE MIR 45 102 -160 2275 67 3 3 chr2 43028639 43028945 -210227638 + AluY SINE Alu 1 306 0 276 345 28 21 chr2 43030533 43030675 -210225908 - L3 LINE CR1 -4 1573 1431 303 369 88 23 chr2 43031193 43031453 -210225130 + L2 LINE L2 2921 3197 -116 523 270 154 35 chr2 43031455 43031714 -210224869 - L2 LINE L2 0 3313 3024 393 256 74 41 chr2 43031710 43031831 -210224752 + L2 LINE L2 3148 3272 0 * 483 316 158 39 chr2 43031906 43032526 -210224057 - L2 LINE L2 -616 2698 2005 2112 217 37 15 chr2 43032554 43033079 -210223504 + L1MD3 LINE L1 7441 8038 -4 460 293 102 0 chr2 43033080 43033227 -210223356 + MIR SINE MIR 42 203 -59 39 50 0 0 chr2 43033384 43033444 -210223139 + AT_rich Low_complexity Low_complexity 1 60 0 1709 192 7 3 chr2 43035916 43036208 -210220375 + AluJb SINE Alu 1 293 -19 342 261 11 0 chr2 43036343 43036431 -210220152 + MER58 DNA MER1_type 3 91 -124 361 223 21 0 chr2 43036451 43036545 -210220038 + MER58 DNA MER1_type 2319 2414 -6 183 139 0 0 chr2 43038288 43038324 -210218259 + (CA)n Simple_repeat Simple_repeat 2 37 0 264 352 52 5 chr2 43039108 43039321 -210217262 + L1ME LINE L1 5576 5798 -323 2834 247 88 22 chr2 43039415 43039630 -210216953 - L1ME1 LINE L1 -7 6159 5960 2417 79 0 16 chr2 43039630 43039946 -210216637 - AluY SINE Alu 0 311 1 2834 247 88 22 chr2 43039946 43041472 -210215111 - L1ME1 LINE L1 -206 5960 4299 2327 47 50 7 chr2 43042488 43042785 -210213798 - AluY SINE Alu -1 310 1 234 204 10 112 chr2 43043940 43044038 -210212545 - L2 LINE L2 -1 3312 3225 1641 132 18 7 chr2 43044102 43044382 -210212201 - L1MA5 LINE L1 -6 6294 6012 21 0 0 0 chr2 43044894 43044915 -210211668 + AT_rich Low_complexity Low_complexity 1 21 0 2325 100 0 3 chr2 43045266 43045576 -210211007 - AluSg SINE Alu -1 309 1 2478 188 93 31 chr2 43045809 43046329 -210210254 + L1MC3 LINE L1 7130 7695 -90 373 175 62 0 chr2 43046329 43046426 -210210157 + L1PA8 LINE L1 6070 6172 0 2478 188 93 31 chr2 43046426 43046516 -210210067 + L1MC3 LINE L1 7695 7778 -7 2271 110 10 0 chr2 43046551 43046860 -210209723 + AluSx SINE Alu 1 312 0 1039 107 0 0 chr2 43047646 43047795 -210208788 + AluSg/x SINE Alu 159 307 -5 276 321 83 42 chr2 43048065 43048233 -210208350 - MIR3 SINE MIR -25 183 9 23 0 0 0 chr2 43048895 43048918 -210207665 + AT_rich Low_complexity Low_complexity 1 23 0 2196 77 7 20 chr2 43049863 43050163 -210206420 + AluY SINE Alu 1 296 -15 295 297 109 63 chr2 43050550 43050789 -210205794 - MIR SINE MIR 0 262 13 23 33 0 0 chr2 43050822 43050852 -210205731 + AT_rich Low_complexity Low_complexity 1 30 0 411 244 13 0 chr2 43050860 43050938 -210205645 + AluJ/FLAM SINE Alu 1 79 -223 244 198 81 23 chr2 43052237 43052323 -210204260 + L1ME2 LINE L1 3197 3287 -2859 1475 266 104 35 chr2 43052382 43053056 -210203527 + L1ME2 LINE L1 3436 4173 -1973 2435 65 7 0 chr2 43053056 43053365 -210203218 + AluY SINE Alu 1 311 0 1475 266 104 35 chr2 43053365 43053471 -210203112 + L1ME2 LINE L1 4173 4270 -1876 1130 280 129 25 chr2 43053471 43053690 -210202893 + MLT1G1 LTR MaLR 1 196 -399 306 0 0 0 chr2 43053690 43053724 -210202859 + (TC)n Simple_repeat Simple_repeat 1 34 0 1130 280 129 25 chr2 43053724 43054014 -210202569 + MLT1G1 LTR MaLR 196 563 -32 256 208 81 102 chr2 43054036 43054233 -210202350 + L1ME2 LINE L1 4263 4455 -1691 920 220 65 79 chr2 43054238 43054483 -210202100 - MLT1A2 LTR MaLR -4 370 130 312 23 23 0 chr2 43054483 43054527 -210202056 + L1PA4 LINE L1 6108 6152 -3 920 220 65 79 chr2 43054527 43054649 -210201934 - MLT1A2 LTR MaLR -244 130 8 1797 248 74 16 chr2 43054655 43055389 -210201194 + L1ME2 LINE L1 4451 5226 -920 2117 244 44 64 chr2 43055393 43055857 -210200726 + L1ME2 LINE L1 5282 5721 -443 2383 147 75 0 chr2 43055857 43056259 -210200324 + MSTB1 LTR MaLR 1 432 0 2117 244 44 64 chr2 43056259 43056694 -210199889 + L1ME2 LINE L1 5721 6163 -1 251 259 74 0 chr2 43056876 43056984 -210199599 + L1MC4 LINE L1 7924 8039 -3 257 0 30 0 chr2 43057017 43057050 -210199533 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 504 17 0 0 chr2 43057050 43057109 -210199474 - L1PA4 LINE L1 -10 6145 6087 441 396 57 8 chr2 43057323 43057588 -210198995 + L2 LINE L2 2995 3272 0 373 294 162 0 chr2 43058626 43058762 -210197821 - MIR SINE MIR -74 188 31 244 267 53 0 chr2 43059709 43059784 -210196799 - MIR SINE MIR 0 262 184 246 344 0 0 chr2 43060459 43060523 -210196060 - L2 LINE L2 -8 3264 3201 292 311 165 0 chr2 43061489 43061592 -210194991 + L2 LINE L2 3151 3270 -2 625 165 9 26 chr2 43061665 43061780 -210194803 - MER81 DNA DNA 0 114 2 996 191 22 11 chr2 43062729 43062912 -210193671 - AluJo SINE Alu -8 304 120 410 271 163 24 chr2 43063070 43063400 -210193183 + L1ME LINE L1 5283 5657 -509 757 244 75 10 chr2 43064173 43064374 -210192209 + MIR SINE MIR 11 224 -38 2154 93 38 0 chr2 43065165 43065454 -210191129 - AluSx SINE Alu -10 302 3 516 234 123 73 chr2 43067047 43067363 -210189220 + L2 LINE L2 1582 1913 -1401 848 234 90 49 chr2 43067363 43067861 -210188722 + LTR50 LTR ERVL 1 669 -126 362 172 54 21 chr2 43067928 43068021 -210188562 - L1MA9 LINE L1 0 6312 6217 2364 179 42 22 chr2 43068021 43068402 -210188181 - LOR1b LTR ERV1 0 461 68 3429 43 0 0 chr2 43068402 43068817 -210187766 - L1PA3 LINE L1 -3 6152 5738 2364 179 42 22 chr2 43068817 43068887 -210187696 - LOR1b LTR ERV1 -393 68 1 4647 166 23 6 chr2 43068887 43068945 -210187638 - L1MA9 LINE L1 -93 6219 6163 207 0 0 0 chr2 43068945 43068968 -210187615 + (TG)n Simple_repeat Simple_repeat 2 24 0 4647 166 23 6 chr2 43068968 43069749 -210186834 - L1MA9 LINE L1 -149 6163 5366 2501 263 120 19 chr2 43069784 43070883 -210185700 + L2 LINE L2 1909 3124 -189 3642 213 84 109 chr2 43070988 43072611 -210183972 - HERVH LTR ERV1 -5661 2052 494 180 77 0 0 chr2 43072611 43072637 -210183946 + (TGGGGG)n Simple_repeat Simple_repeat 1 26 0 3642 213 84 109 chr2 43072637 43073119 -210183464 - HERVH LTR ERV1 -7219 494 1 1160 193 102 58 chr2 43073119 43073550 -210183033 - LTR7 LTR ERV1 0 450 1 279 0 0 0 chr2 43074039 43074070 -210182513 + (CA)n Simple_repeat Simple_repeat 2 32 0 1673 149 43 25 chr2 43074276 43074652 -210181931 + Tigger3(Golem) DNA MER2_type 1 3029 0 2726 153 19 0 chr2 43075282 43075751 -210180832 + L1MB3 LINE L1 5697 6174 -9 21 0 0 0 chr2 43076235 43076256 -210180327 + AT_rich Low_complexity Low_complexity 1 21 0 4510 149 5 32 chr2 43078590 43079098 -210177485 + L1PA12 LINE L1 4787 5307 -861 2301 89 0 7 chr2 43079098 43079401 -210177182 + AluSg1 SINE Alu 1 301 -8 4510 149 5 32 chr2 43079401 43080092 -210176491 + L1PA12 LINE L1 5307 5958 -210 7948 136 18 2 chr2 43080260 43081537 -210175046 + HSMAR2 DNA Mariner 4 1300 -2 2194 140 0 0 chr2 43082309 43082617 -210173966 - AluSx SINE Alu -4 308 1 1292 131 0 0 chr2 43082912 43083088 -210173495 - AluSx SINE Alu -136 176 1 2333 174 13 7 chr2 43083365 43083819 -210172764 + L1MA8 LINE L1 5825 6281 -10 1369 114 50 23 chr2 43084074 43084293 -210172290 - MER30 DNA MER1_type -4 226 2 24 0 0 0 chr2 43087155 43087179 -210169404 + AT_rich Low_complexity Low_complexity 1 24 0 2311 108 0 3 chr2 43087232 43087537 -210169046 + AluSg SINE Alu 1 304 -6 3473 132 9 17 chr2 43087734 43088265 -210168318 - MER1A DNA MER1_type 0 527 1 4144 153 42 46 chr2 43089152 43090119 -210166464 + pTR5 LTR ERV1 741 2025 -413 274 255 31 20 chr2 43090119 43090217 -210166366 + LTR30 LTR ERV1 544 642 -80 1483 101 4 9 chr2 43090220 43090447 -210166136 + pTR5 LTR ERV1 172 397 -2041 2203 114 7 3 chr2 43090724 43091030 -210165553 + AluSg SINE Alu 1 307 -3 1880 208 109 36 chr2 43091042 43091509 -210165074 + MLT1D LTR MaLR 4 504 -1 230 293 91 0 chr2 43091614 43091713 -210164870 - L2 LINE L2 -199 3073 2966 379 208 9 9 chr2 43091713 43091819 -210164764 + G-rich Low_complexity Low_complexity 5 110 0 25 75 0 0 chr2 43093202 43093255 -210163328 + AT_rich Low_complexity Low_complexity 1 53 0 25 0 0 0 chr2 43093628 43093653 -210162930 + AT_rich Low_complexity Low_complexity 1 25 0 722 119 0 0 chr2 43095690 43095799 -210160784 - L1P LINE L1 -1156 4990 4882 4761 60 2 20 chr2 43095799 43096433 -210160150 + L1PA8 LINE L1 5546 6171 -1 5424 109 16 22 chr2 43096647 43097534 -210159049 - L1MA5A LINE L1 -5 6292 5412 1236 219 32 74 chr2 43100972 43101501 -210155082 - Charlie4a DNA MER1_type 0 508 2 564 272 36 28 chr2 43101531 43101583 -210155000 - L1ME LINE L1 -580 5582 5532 388 77 0 240 chr2 43101583 43101687 -210154896 + MADE1 DNA Mariner 2 80 0 564 272 36 28 chr2 43101687 43101934 -210154649 - L1ME LINE L1 -630 5532 5260 504 244 8 25 chr2 43102149 43102322 -210154261 - MER63A DNA MER1_type 0 210 39 578 303 106 24 chr2 43102427 43103180 -210153403 - L1ME LINE L1 -1230 4916 4102 337 338 67 13 chr2 43103375 43103911 -210152672 - L1ME LINE L1 -2283 3863 3299 746 231 38 71 chr2 43104113 43104351 -210152232 + MLT1D LTR MaLR 1 230 -275 702 191 21 14 chr2 43104349 43104490 -210152093 + MLT1D LTR MaLR 364 505 0 * 22 0 0 0 chr2 43104583 43104605 -210151978 + AT_rich Low_complexity Low_complexity 1 22 0 513 0 0 0 chr2 43104972 43105029 -210151554 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 410 306 32 12 chr2 43105104 43105156 -210151427 - L1ME LINE L1 -3759 2387 2338 1806 164 14 0 chr2 43105156 43105443 -210151140 - AluSx SINE Alu -19 293 3 410 306 32 12 chr2 43105443 43105642 -210150941 - L1ME LINE L1 -3808 2338 2131 228 351 34 34 chr2 43107552 43107700 -210148883 - MIR SINE MIR -92 170 23 237 287 223 0 chr2 43107824 43107981 -210148602 - MIR SINE MIR -63 199 8 199 291 55 73 chr2 43108048 43108158 -210148425 + MIR3 SINE MIR 95 202 -6 21 0 0 0 chr2 43108173 43108194 -210148389 + AT_rich Low_complexity Low_complexity 1 21 0 275 240 13 13 chr2 43108625 43108700 -210147883 + MLT1D LTR MaLR 431 505 0 806 211 56 56 chr2 43108798 43109064 -210147519 + L1MD3 LINE L1 7730 7995 0 2249 118 0 0 chr2 43109109 43109415 -210147168 - AluSg SINE Alu 0 310 5 307 265 21 37 chr2 43109854 43109979 -210146604 - MIR SINE MIR -80 128 28 276 306 174 0 chr2 43110212 43110333 -210146250 + LTR33A LTR ERVL 19 160 -361 198 156 0 0 chr2 43110734 43110779 -210145804 + (CA)n Simple_repeat Simple_repeat 2 46 0 577 262 21 61 chr2 43110891 43111019 -210145564 + Charlie7 DNA MER1_type 1500 1632 -980 2348 90 0 0 chr2 43111019 43111308 -210145275 - AluSc SINE Alu -20 289 1 577 262 21 61 chr2 43111308 43111458 -210145125 + Charlie7 DNA MER1_type 1632 1767 -845 866 305 72 19 chr2 43111680 43112221 -210144362 + L1ME LINE L1 589 1158 -5214 * 30092 57 4 1 chr2 43112219 43116024 -210140559 + L1P LINE L1 2 3816 -2330 4405 32 0 0 chr2 43116024 43116537 -210140046 + L1PA4 LINE L1 5633 6155 0 569 307 53 26 chr2 43116542 43116972 -210139611 + L1ME LINE L1 1042 1483 -4901 234 91 0 0 chr2 43116973 43117006 -210139577 + (CA)n Simple_repeat Simple_repeat 2 34 0 11037 204 33 22 chr2 43117986 43119929 -210136654 + L1PA13 LINE L1 156 2176 -4621 2203 121 0 13 chr2 43119929 43120242 -210136341 + AluSc SINE Alu 1 309 0 11037 204 33 22 chr2 43120242 43121370 -210135213 + L1PA13 LINE L1 2176 3290 -3507 2278 138 5 36 chr2 43121370 43121493 -210135090 - THE1C LTR MaLR 0 375 250 2194 134 0 3 chr2 43121493 43121806 -210134777 + AluSx SINE Alu 1 312 0 2278 138 5 36 chr2 43121806 43122067 -210134516 - THE1C LTR MaLR -125 250 3 8213 127 18 68 chr2 43122069 43123449 -210133134 - THE1C-int LTR MaLR 0 1580 272 2378 86 3 0 chr2 43123449 43123741 -210132842 + AluY SINE Alu 2 294 -17 8213 127 18 68 chr2 43123741 43123787 -210132796 - THE1C-int LTR MaLR -1308 272 225 * 11456 176 16 18 chr2 43123785 43126816 -210129767 + L1PA13 LINE L1 3789 6810 -4 23 33 0 0 chr2 43126818 43126848 -210129735 + AT_rich Low_complexity Low_complexity 1 30 0 2326 108 0 6 chr2 43127337 43127651 -210128932 - AluSx SINE Alu 0 312 1 255 260 55 62 chr2 43127692 43127838 -210128745 - L2 LINE L2 -7 3306 3162 273 391 161 0 chr2 43127871 43128150 -210128433 - L2 LINE L2 -337 2977 2654 280 235 306 0 chr2 43128450 43128548 -210128035 + MER63 DNA MER1_type 12 765 -71 950 191 41 20 chr2 43128604 43128850 -210127733 - L1M4 LINE L1 -946 5200 4950 536 227 163 64 chr2 43128976 43129351 -210127232 - LTR37B LTR ERV1 -6 462 51 1110 193 20 0 chr2 43130607 43130851 -210125732 - L1MA8 LINE L1 -4 6287 6039 2082 149 0 0 chr2 43131290 43131598 -210124985 + AluSx SINE Alu 1 308 -4 303 360 0 0 chr2 43131768 43131868 -210124715 + MIR3 SINE MIR 87 186 -22 417 296 90 16 chr2 43131944 43132133 -210124450 - LTR16A LTR ERVL -5 445 243 17279 31 0 0 chr2 43132133 43134226 -210122357 - L1PA3 LINE L1 -1755 4391 2299 8300 27 2 0 chr2 43134226 43135975 -210120608 + L1PA3 LINE L1 4405 6154 -1 763 280 11 5 chr2 43135975 43136164 -210120419 - LTR16A LTR ERVL -195 255 66 219 278 189 0 chr2 43136668 43136758 -210119825 - L2 LINE L2 -6 3307 3201 2093 113 3 0 chr2 43137342 43137646 -210118937 + AluSg SINE Alu 1 305 0 1235 310 96 47 chr2 43137657 43138462 -210118121 + L2 LINE L2 1770 2629 -685 969 204 63 47 chr2 43138462 43138717 -210117866 + MIR SINE MIR 2 260 -2 1235 310 96 47 chr2 43138717 43138862 -210117721 + L2 LINE L2 2629 2766 -548 252 248 223 13 chr2 43138934 43139091 -210117492 + L2 LINE L2 3124 3313 0 198 103 0 0 chr2 43139868 43139897 -210116686 + (TAA)n Simple_repeat Simple_repeat 1 29 0 507 257 63 53 chr2 43139910 43140116 -210116467 - MIR SINE MIR -21 241 34 180 287 119 59 chr2 43140304 43140405 -210116178 - L2 LINE L2 -174 3098 2992 193 57 57 0 chr2 43141203 43141238 -210115345 + (TCTA)n Simple_repeat Simple_repeat 2 38 0 384 284 63 16 chr2 43141617 43141744 -210114839 + MIR3 SINE MIR 71 203 -5 2230 109 3 3 chr2 43142355 43142657 -210113926 - AluSx SINE Alu -10 302 1 221 255 20 20 chr2 43142966 43143017 -210113566 + L2 LINE L2 3207 3257 -15 21 36 0 0 chr2 43143177 43143205 -210113378 + AT_rich Low_complexity Low_complexity 1 28 0 488 246 87 7 chr2 43143319 43143457 -210113126 - MIR SINE MIR -1 261 113 2042 173 3 0 chr2 43143476 43143806 -210112777 - MLT1A1 LTR MaLR -34 331 1 287 330 44 0 chr2 43143825 43143916 -210112667 - MIR SINE MIR -166 96 2 349 234 62 31 chr2 43145717 43145845 -210110738 - L1MC4a LINE L1 -1894 5914 5783 21 0 0 0 chr2 43145857 43145878 -210110705 + AT_rich Low_complexity Low_complexity 1 21 0 29 47 0 0 chr2 43146035 43146078 -210110505 + AT_rich Low_complexity Low_complexity 1 43 0 370 346 19 38 chr2 43146170 43146381 -210110202 - HAL1b LINE L1 -477 871 665 288 337 83 37 chr2 43146456 43146756 -210109827 - HAL1b LINE L1 -782 566 253 180 0 0 0 chr2 43147085 43147105 -210109478 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1849 160 50 16 chr2 43147554 43147917 -210108666 + THE1C LTR MaLR 1 375 0 8328 144 12 37 chr2 43147919 43149345 -210107238 + THE1C-int LTR MaLR 3 1392 -188 434 70 0 56 chr2 43149345 43149416 -210107167 + THE1C-int LTR MaLR 1514 1580 0 1825 136 43 59 chr2 43149416 43149791 -210106792 + THE1C LTR MaLR 1 369 -6 349 285 133 19 chr2 43150386 43150649 -210105934 - L1M4 LINE L1 -1827 4319 4027 227 139 14 42 chr2 43152471 43152543 -210104040 + CT-rich Low_complexity Low_complexity 4 73 0 12951 146 8 8 chr2 43152706 43156568 -210100015 + HERVH LTR ERV1 2294 6091 -1622 4804 153 8 6 chr2 43156554 43157353 -210099230 + HERVH LTR ERV1 6914 7713 0 * 1184 207 96 40 chr2 43157353 43157779 -210098804 + LTR7 LTR ERV1 1 450 0 1294 276 30 21 chr2 43158141 43158575 -210098008 + L1ME1 LINE L1 66 503 -5893 2530 231 64 34 chr2 43158582 43159730 -210096853 + L1ME1 LINE L1 5050 6231 -4 552 276 35 22 chr2 43159959 43160191 -210096392 - L1MB8 LINE L1 -32 6146 5912 500 194 32 48 chr2 43160192 43160316 -210096267 - L1MD2 LINE L1 -109 6250 6129 479 279 28 48 chr2 43160291 43160542 -210096041 - L1M4c LINE L1 -4704 1680 1435 * 256 263 88 91 chr2 43160868 43161738 -210094845 + L1M4 LINE L1 4472 5339 -807 22 0 0 0 chr2 43162126 43162148 -210094435 + AT_rich Low_complexity Low_complexity 1 22 0 432 240 19 0 chr2 43163149 43163253 -210093330 - MER117 DNA MER1_type -91 106 1 221 282 113 48 chr2 43163265 43163389 -210093194 + MIR SINE MIR 65 196 -66 24 85 0 0 chr2 43163475 43163534 -210093049 + AT_rich Low_complexity Low_complexity 1 59 0 2126 181 18 0 chr2 43163546 43163945 -210092638 - L1MB2 LINE L1 0 6171 5766 3162 203 21 32 chr2 43163992 43165192 -210091391 - L1MB8 LINE L1 -362 5809 4629 296 288 17 34 chr2 43166926 43167044 -210089539 + GA-rich Low_complexity Low_complexity 1 116 0 2550 170 43 4 chr2 43167086 43167599 -210088984 - L1MA5A LINE L1 -3 6294 5762 1725 151 56 22 chr2 43167600 43167924 -210088659 - THE1C LTR MaLR -40 335 1 3108 146 31 55 chr2 43167925 43168090 -210088493 - L1MA5A LINE L1 -549 5748 5581 2191 135 34 63 chr2 43168090 43168535 -210088048 - MSTB1 LTR MaLR 0 432 1 3108 146 31 55 chr2 43168535 43169457 -210087126 - L1MA5A LINE L1 -716 5581 4688 2200 169 39 8 chr2 43169455 43169941 -210086642 + L1MA5A LINE L1 4189 4689 -1457 * 239 333 58 42 chr2 43170871 43170991 -210085592 - MIR SINE MIR -72 190 69 487 279 25 8 chr2 43171285 43171407 -210085176 - MIR SINE MIR -65 143 20 262 288 14 0 chr2 43172439 43172512 -210084071 + L2 LINE L2 3238 3311 -2 805 194 106 0 chr2 43173629 43173789 -210082794 + MER45A DNA AcHobo 2 178 0 299 303 0 0 chr2 43174308 43174384 -210082199 + MIR SINE MIR 187 262 0 273 326 70 16 chr2 43174521 43174650 -210081933 + MIR SINE MIR 113 248 -14 4187 130 8 0 chr2 43174783 43175390 -210081193 - LTR9 LTR ERV1 0 612 1 222 261 77 0 chr2 43175408 43175473 -210081110 + L2 LINE L2 2979 3048 -224 401 313 67 7 chr2 43175611 43175761 -210080822 + MLT1G1 LTR MaLR 25 183 -412 342 161 46 0 chr2 43175767 43175854 -210080729 + GA-rich Low_complexity Low_complexity 4 94 0 2136 143 60 5 chr2 43175950 43176320 -210080263 - L1M2 LINE L1 -570 5742 5353 220 250 26 0 chr2 43177480 43177556 -210079027 + (TA)n Simple_repeat Simple_repeat 1 78 0 707 81 0 0 chr2 43179108 43179207 -210077376 - L1MA2 LINE L1 0 6304 6206 1098 236 5 5 chr2 43179207 43179419 -210077164 - L1M1 LINE L1 -5967 1598 1387 2348 246 68 60 chr2 43179430 43180554 -210076029 - L1M2 LINE L1 -785 5361 4187 259 284 118 8 chr2 43180584 43180711 -210075872 + HAL1 LINE L1 10 150 -2357 2095 230 58 6 chr2 43180740 43181223 -210075360 + LTR53 LTR ERVL 1 508 -11 443 321 128 22 chr2 43181282 43181649 -210074934 + HAL1 LINE L1 270 675 -1832 1799 216 2 62 chr2 43181654 43182013 -210074570 + MLT2D LTR ERVL 6 336 -78 189 0 0 0 chr2 43182013 43182034 -210074549 + (TC)n Simple_repeat Simple_repeat 2 22 0 1799 216 2 62 chr2 43182034 43182109 -210074474 + MLT2D LTR ERVL 336 414 0 981 207 57 0 chr2 43182193 43182386 -210074197 + MER20 DNA MER1_type 1 204 -15 454 275 96 33 chr2 43182789 43183029 -210073554 + HAL1 LINE L1 1502 1756 -751 403 276 88 35 chr2 43183031 43183259 -210073324 + HAL1 LINE L1 1838 2077 -430 2439 64 0 0 chr2 43183270 43183566 -210073017 + AluY SINE Alu 1 296 -15 966 184 26 0 chr2 43183789 43183979 -210072604 + MSTD LTR MaLR 198 392 -4 1945 107 24 7 chr2 43184166 43184456 -210072127 - AluSc SINE Alu -14 295 1 23 33 0 0 chr2 43184590 43184620 -210071963 + AT_rich Low_complexity Low_complexity 1 30 0 724 171 44 25 chr2 43186555 43186713 -210069870 + LTR41 LTR ERVL 1 161 -612 394 224 211 36 chr2 43187120 43187343 -210069240 + LTR41 LTR ERVL 506 767 -6 280 298 242 6 chr2 43187401 43187562 -210069021 - MIR SINE MIR -13 249 51 27 29 0 0 chr2 43188334 43188368 -210068215 + AT_rich Low_complexity Low_complexity 1 34 0 261 326 41 0 chr2 43188897 43188995 -210067588 - MIR3 SINE MIR -12 196 95 230 139 93 0 chr2 43189021 43189064 -210067519 - MLT2C2 LTR ERVL 0 464 418 342 0 0 0 chr2 43189066 43189104 -210067479 + (TG)n Simple_repeat Simple_repeat 2 39 0 444 231 103 0 chr2 43189137 43189254 -210067329 - MLT2B1 LTR ERVL -31 489 361 3142 160 11 15 chr2 43189254 43189797 -210066786 - ERVL LTR ERVL -274 5490 4950 579 308 45 29 chr2 43189975 43190352 -210066231 - L1MC/D LINE L1 -2109 5699 5317 1777 203 15 25 chr2 43190773 43191172 -210065411 + L1MD3 LINE L1 7431 7825 -170 250 237 112 124 chr2 43191220 43191558 -210065025 - L1ME LINE L1 -225 5896 5563 790 195 129 9 chr2 43191715 43191816 -210064767 - L1MA9 LINE L1 -38 6274 6186 221 57 29 0 chr2 43191816 43191851 -210064732 + (TG)n Simple_repeat Simple_repeat 1 36 0 790 195 129 9 chr2 43191851 43191959 -210064624 - L1MA9 LINE L1 -126 6186 6040 4613 170 27 75 chr2 43192725 43193218 -210063365 - L1MA9 LINE L1 -10 6302 5787 2331 132 25 0 chr2 43193218 43193583 -210063000 + THE1C LTR MaLR 2 375 0 4613 170 27 75 chr2 43193583 43193609 -210062974 - L1MA9 LINE L1 -525 5787 5761 243 0 0 0 chr2 43193609 43193636 -210062947 + (TG)n Simple_repeat Simple_repeat 2 28 0 4613 170 27 75 chr2 43193636 43194943 -210061640 - L1MA9 LINE L1 -551 5761 4565 2613 175 35 1 chr2 43194940 43195636 -210060947 - L1PB1 LINE L1 -681 5470 4760 * 4628 102 15 3 chr2 43195636 43196310 -210060273 + L1PB1 LINE L1 5465 6149 -2 387 275 300 33 chr2 43196418 43196490 -210060093 - L1MEd LINE L1 -5611 508 456 1878 150 0 19 chr2 43196490 43196797 -210059786 - AluSx SINE Alu -9 303 3 387 275 300 33 chr2 43196797 43197121 -210059462 - L1MEd LINE L1 -5663 456 6 359 250 95 34 chr2 43197174 43197233 -210059350 - L1MA10 LINE L1 0 6334 6276 1643 234 29 17 chr2 43197233 43197652 -210058931 - L1ME1 LINE L1 -56 6110 5687 539 193 49 8 chr2 43197669 43197844 -210058739 - L1MA9 LINE L1 -1568 4578 4397 * 649 239 5 16 chr2 43197814 43197998 -210058585 - L1MA9 LINE L1 -1661 4485 4304 * 2973 215 24 1 chr2 43197989 43198692 -210057891 + L1 LINE L1 3199 3917 -2229 2115 231 12 20 chr2 43198842 43199344 -210057239 - LTR31 LTR ERV1 -17 602 105 377 303 49 37 chr2 43200138 43200300 -210056283 + MIR3 SINE MIR 39 202 -6 23 54 0 0 chr2 43200879 43200916 -210055667 + AT_rich Low_complexity Low_complexity 1 37 0 236 208 0 0 chr2 43201069 43201117 -210055466 + MER116 DNA Mariner 5 52 -28 213 39 0 0 chr2 43202218 43202244 -210054339 + (TAGA)n Simple_repeat Simple_repeat 3 28 0 344 300 89 32 chr2 43202244 43202425 -210054158 - L1M4 LINE L1 -1537 4609 4415 35 24 0 0 chr2 43202448 43202490 -210054093 + AT_rich Low_complexity Low_complexity 1 42 0 2008 135 0 7 chr2 43202555 43202859 -210053724 + AluSx SINE Alu 1 302 -10 223 329 61 0 chr2 43202874 43202956 -210053627 - MIR SINE MIR -108 154 68 212 51 0 51 chr2 43204690 43204729 -210051854 + (TAAAA)n Simple_repeat Simple_repeat 4 40 0 4755 11 2 4 chr2 43205071 43205616 -210050967 - L1PA3 LINE L1 -3 6152 5609 21263 159 29 16 chr2 43207720 43215331 -210041252 - L1MA1 LINE L1 0 7721 6 22 0 0 0 chr2 43215419 43215441 -210041142 + AT_rich Low_complexity Low_complexity 1 22 0 488 329 30 17 chr2 43215573 43215871 -210040712 + L1MC4 LINE L1 5581 5882 -1926 25 51 0 0 chr2 43216045 43216084 -210040499 + AT_rich Low_complexity Low_complexity 1 39 0 25 51 0 0 chr2 43216143 43216182 -210040401 + AT_rich Low_complexity Low_complexity 1 39 0 309 324 34 28 chr2 43220028 43220207 -210036376 - L2 LINE L2 -932 2382 2203 244 209 0 0 chr2 43220914 43220957 -210035626 - L2 LINE L2 -84 3229 3187 1096 188 32 28 chr2 43221650 43221868 -210034715 - MER20 DNA MER1_type 0 219 1 23 54 0 0 chr2 43222001 43222038 -210034545 + AT_rich Low_complexity Low_complexity 1 37 0 3098 147 59 4 chr2 43222577 43223101 -210033482 - MER41C LTR ERV1 0 554 2 211 137 68 0 chr2 43223326 43223399 -210033184 + (TA)n Simple_repeat Simple_repeat 2 79 0 378 190 20 0 chr2 43223996 43224096 -210032487 - L1MA8 LINE L1 -4 6287 6186 31 0 0 0 chr2 43226146 43226177 -210030406 + AT_rich Low_complexity Low_complexity 1 31 0 289 304 141 15 chr2 43226518 43226653 -210029930 + MIR SINE MIR 39 190 -72 1583 204 75 46 chr2 43226852 43227738 -210028845 + L1MD2 LINE L1 5269 6141 -218 331 303 0 0 chr2 43228289 43228378 -210028205 - L1MC4 LINE L1 -1339 6703 6615 239 244 35 0 chr2 43228389 43228475 -210028108 - L1MC4 LINE L1 -1339 6703 6615 226 277 0 11 chr2 43228391 43228485 -210028098 + L1MC4 LINE L1 6614 6706 -1336 * 1289 230 94 38 chr2 43230643 43231188 -210025395 - MLT1F1 LTR MaLR 0 567 5 216 135 0 0 chr2 43231241 43231278 -210025305 + (TA)n Simple_repeat Simple_repeat 1 37 0 1565 170 31 9 chr2 43231440 43231763 -210024820 + MER2 DNA MER2_type 2 331 -14 240 204 0 37 chr2 43232461 43232515 -210024068 + MIR SINE MIR 80 131 -131 635 241 0 6 chr2 43232916 43233074 -210023509 - L1PA15 LINE L1 -1 6164 6008 710 202 65 65 chr2 43234008 43234270 -210022313 - MER63C DNA MER1_type -2 928 667 1666 201 37 124 chr2 43234271 43234941 -210021642 + LTR9 LTR ERV1 1 612 0 4498 182 43 25 chr2 43234941 43236589 -210019994 + HUERS-P3 LTR ERV1 1 1747 -5671 17099 188 48 26 chr2 43236607 43239471 -210017112 + HUERS-P3 LTR ERV1 2033 4970 -2597 2323 104 7 0 chr2 43239471 43239780 -210016803 - AluY SINE Alu 0 311 1 17099 188 48 26 chr2 43239780 43241848 -210014735 + HUERS-P3 LTR ERV1 4970 6991 -576 987 124 11 16 chr2 43241832 43242017 -210014566 + HUERS-P3 LTR ERV1 3945 4128 -3688 * 1430 156 23 19 chr2 43242231 43242488 -210014095 + HUERS-P3 LTR ERV1 8659 8916 -3 1412 212 7 76 chr2 43242493 43242913 -210013670 + LTR9 LTR ERV1 1 391 -221 570 252 51 65 chr2 43242884 43243043 -210013540 + LTR9 LTR ERV1 323 478 -134 * 2215 107 0 0 chr2 43243043 43243332 -210013251 - AluY SINE Alu -19 292 4 570 252 51 65 chr2 43243332 43243466 -210013117 + LTR9 LTR ERV1 478 612 0 * 1530 150 111 171 chr2 43243466 43244178 -210012405 - MER63C DNA MER1_type -261 669 1 429 380 157 3 chr2 43244567 43244885 -210011698 - L3 LINE CR1 -353 1224 858 515 236 65 0 chr2 43245407 43245530 -210011053 - MIR SINE MIR -86 176 46 21 36 0 0 chr2 43246920 43246948 -210009635 + AT_rich Low_complexity Low_complexity 1 28 0 272 273 15 15 chr2 43246972 43247038 -210009545 - L2 LINE L2 -27 3245 3180 2437 63 7 0 chr2 43248314 43248615 -210007968 + AluY SINE Alu 1 303 -8 303 28 0 0 chr2 43249772 43249808 -210006775 + (CA)n Simple_repeat Simple_repeat 1 36 0 2098 127 10 3 chr2 43300799 43301107 -209955476 - AluSx SINE Alu -2 310 1 2142 138 0 0 chr2 43302713 43303010 -209953573 - AluSx SINE Alu -15 297 1 769 338 82 14 chr2 43303530 43304117 -209952466 - L2 LINE L2 -16 3297 2680 303 250 97 48 chr2 43304840 43304964 -209951619 - MIR SINE MIR -71 191 62 189 0 0 0 chr2 43305431 43305452 -209951131 + (T)n Simple_repeat Simple_repeat 1 21 0 357 364 59 17 chr2 43306011 43306129 -209950454 - L2 LINE L2 -2 3270 3148 226 234 0 0 chr2 43306411 43306458 -209950125 + (CTATT)n Simple_repeat Simple_repeat 3 49 0 2268 82 0 23 chr2 43306716 43307019 -209949564 + AluY SINE Alu 3 298 -13 1603 192 14 10 chr2 43307400 43307691 -209948892 + AluJo SINE Alu 1 292 -20 2059 134 0 22 chr2 43307880 43308194 -209948389 - AluSg SINE Alu -3 307 1 484 341 124 38 chr2 43308444 43308863 -209947720 + L2 LINE L2 2818 3272 0 307 351 20 14 chr2 43309293 43309441 -209947142 - MIR3 SINE MIR -12 196 48 265 182 64 47 chr2 43309880 43309982 -209946601 - MLT1G LTR MaLR -18 572 431 291 54 0 0 chr2 43310063 43310100 -209946483 + (TG)n Simple_repeat Simple_repeat 2 38 0 26 30 0 0 chr2 43310945 43310978 -209945605 + AT_rich Low_complexity Low_complexity 1 33 0 242 145 101 14 chr2 43311038 43311107 -209945476 - L1MA3 LINE L1 0 6305 6231 * 842 140 30 1 chr2 43311046 43311206 -209945377 + L1MA2 LINE L1 5835 5958 -203 373 208 0 0 chr2 43311211 43311283 -209945300 - MER94 DNA DNA -60 74 3 630 211 26 26 chr2 43313351 43313503 -209943080 + L1MB7 LINE L1 6016 6167 -17 10095 16 0 0 chr2 43313716 43315675 -209940908 - L1HS LINE L1 0 6155 4197 * 14598 24 0 0 chr2 43315671 43317413 -209939170 + L1HS LINE L1 2460 4201 -1945 10100 180 31 2 chr2 43317438 43319572 -209937011 - L1P5 LINE L1 -583 5573 3379 13088 212 56 4 chr2 43319668 43323257 -209933326 + L1 LINE L1 1524 5288 -858 2540 57 0 0 chr2 43323641 43323940 -209932643 + AluY SINE Alu 1 299 -12 1031 31 0 8 chr2 43323940 43324069 -209932514 + L1PB1 LINE L1 6022 6149 -2 398 264 64 18 chr2 43324069 43324179 -209932404 - MER5B DNA MER1_type -61 117 3 305 330 153 48 chr2 43326229 43326294 -209930289 + L2 LINE L2 1276 1333 -1981 2123 108 0 40 chr2 43326294 43326618 -209929965 - AluSx SINE Alu -1 311 1 305 330 153 48 chr2 43326618 43327729 -209928854 + L2 LINE L2 1333 2575 -739 336 384 24 76 chr2 43327889 43328178 -209928405 + L2 LINE L2 2997 3270 -2 1115 322 32 26 chr2 43328948 43329454 -209927129 - L2 LINE L2 0 3313 2805 249 308 95 80 chr2 43330372 43330889 -209925694 + L2 LINE L2 2301 2830 -484 2592 45 0 6 chr2 43330889 43331202 -209925381 - AluY SINE Alu 0 311 1 249 308 95 80 chr2 43331202 43331284 -209925299 + L2 LINE L2 2830 2909 -405 232 179 0 0 chr2 43331446 43331485 -209925098 - L2 LINE L2 -1 3312 3274 210 208 0 0 chr2 43333243 43333296 -209923287 + (CA)n Simple_repeat Simple_repeat 2 54 0 354 280 11 11 chr2 43334132 43334225 -209922358 + MIR SINE MIR 24 116 -92 566 318 28 37 chr2 43334225 43334442 -209922141 - MIR SINE MIR -1 261 47 572 217 7 35 chr2 43334490 43334633 -209921950 + L2 LINE L2 3170 3308 -5 969 322 93 16 chr2 43334982 43335488 -209921095 - L3 LINE CR1 -443 1134 590 695 290 46 8 chr2 43336155 43336414 -209920169 + LTR16C LTR ERVL 217 485 -6 268 325 0 0 chr2 43337617 43337697 -209918886 + MIR SINE MIR 64 143 -119 264 287 213 9 chr2 43338177 43338285 -209918298 + L2 LINE L2 3141 3270 -2 21 0 0 0 chr2 43338606 43338627 -209917956 + AT_rich Low_complexity Low_complexity 1 21 0 225 282 14 14 chr2 43340633 43340704 -209915879 + MIR3 SINE MIR 103 173 -35 1071 228 37 8 chr2 43340984 43341225 -209915358 + L1MCa LINE L1 4 251 -6175 2400 67 3 0 chr2 43341684 43341982 -209914601 - AluY SINE Alu -12 299 1 194 315 108 15 chr2 43341982 43342112 -209914471 + MIR SINE MIR 77 218 -44 232 350 181 19 chr2 43342740 43342900 -209913683 - L3 LINE CR1 -1 1576 1391 2294 107 0 3 chr2 43344048 43344357 -209912226 + AluSc SINE Alu 1 308 -1 550 286 0 0 chr2 43344860 43344972 -209911611 - L2 LINE L2 -1 3271 3160 15724 194 127 18 chr2 43346079 43350227 -209906356 + L1PA12 LINE L1 1029 6439 -1145 229 81 135 0 chr2 43350243 43350280 -209906303 + L1PA13 LINE L1 6119 6160 -3 23 33 0 0 chr2 43350280 43350310 -209906273 + AT_rich Low_complexity Low_complexity 1 30 0 432 348 69 20 chr2 43350622 43350869 -209905714 + MIR SINE MIR 3 261 -1 4502 155 35 9 chr2 43351093 43351910 -209904673 - L1PB4 LINE L1 -3 6153 5315 23 33 0 0 chr2 43352033 43352063 -209904520 + AT_rich Low_complexity Low_complexity 1 30 0 196 174 109 0 chr2 43352073 43352119 -209904464 + MER5B DNA MER1_type 106 156 -22 777 308 77 6 chr2 43353890 43354215 -209902368 + L1M2 LINE L1 103 450 -6399 1543 159 39 0 chr2 43354336 43354669 -209901914 + L1 LINE L1 3076 3421 -2725 1366 275 90 30 chr2 43355177 43355890 -209900693 + L1MC4 LINE L1 7122 7877 -165 287 161 0 16 chr2 43355902 43355964 -209900619 + GA-rich Low_complexity Low_complexity 1 61 0 194 261 197 58 chr2 43356072 43356260 -209900323 + L3b LINE CR1 1284 1497 -86 253 246 167 38 chr2 43357964 43358252 -209898331 - L1MC4a LINE L1 -1630 6178 5854 548 89 13 0 chr2 43360115 43360194 -209896389 - MADE1 DNA Mariner 0 80 1 207 176 0 0 chr2 43360220 43360254 -209896329 + MIR SINE MIR 159 192 -70 249 332 99 58 chr2 43362275 43362498 -209894085 + LTR67 LTR ERVL 43 274 -283 302 241 54 9 chr2 43362505 43362617 -209893966 - MER104 DNA Tc2 -63 117 1 240 272 88 8 chr2 43364548 43364673 -209891910 + L1ME4a LINE L1 5975 6109 -12 2747 154 68 6 chr2 43364982 43365529 -209891054 - L1MA7 LINE L1 0 6291 5711 319 280 125 36 chr2 43365529 43365697 -209890886 + MIR SINE MIR 66 248 -14 373 281 101 14 chr2 43365761 43365900 -209890683 - MIR SINE MIR -28 234 84 213 94 0 0 chr2 43366447 43366479 -209890104 + (TA)n Simple_repeat Simple_repeat 1 32 0 10780 37 12 1 chr2 43366481 43368580 -209888003 - L1PA5 LINE L1 -3 6151 4045 448 324 35 12 chr2 43369126 43369296 -209887287 + MIR3 SINE MIR 26 199 -9 292 317 129 32 chr2 43369917 43370258 -209886325 + LTR33 LTR ERVL 134 507 -14 1499 174 12 0 chr2 43370263 43370505 -209886078 + Tigger3(Golem) DNA MER2_type 2790 3034 0 227 320 82 51 chr2 43372406 43372662 -209883921 + L2 LINE L2 1893 2156 -1158 594 385 82 11 chr2 43373520 43373884 -209882699 + MLT1K LTR MaLR 27 416 -172 21 0 0 0 chr2 43374566 43374587 -209881996 + AT_rich Low_complexity Low_complexity 1 21 0 2295 114 0 0 chr2 43375170 43375476 -209881107 + AluSg SINE Alu 1 306 -4 195 205 0 26 chr2 43375718 43375757 -209880826 - MIR SINE MIR -88 120 83 594 175 8 42 chr2 43376174 43376294 -209880289 - MER58A DNA MER1_type -8 216 101 1865 230 36 34 chr2 43376301 43376829 -209879754 - MER41B LTR ERV1 -12 597 114 504 274 0 0 chr2 43376829 43376931 -209879652 - MER58A DNA MER1_type -2 105 4 323 291 40 54 chr2 43377542 43377677 -209878906 - L2 LINE L2 0 3313 3179 207 0 0 0 chr2 43377677 43377700 -209878883 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 323 291 40 54 chr2 43377700 43377712 -209878871 - L2 LINE L2 -134 3179 3168 3180 285 45 41 chr2 43377766 43379042 -209877541 - L2 LINE L2 -289 3024 1728 196 253 89 25 chr2 43379417 43379496 -209877087 - L2 LINE L2 -4 3309 3226 24 0 0 0 chr2 43380303 43380327 -209876256 + AT_rich Low_complexity Low_complexity 1 24 0 210 258 142 33 chr2 43380501 43380621 -209875962 - L2 LINE L2 -2 3311 3179 35 0 0 0 chr2 43380670 43380705 -209875878 + AT_rich Low_complexity Low_complexity 1 35 0 216 182 0 0 chr2 43380900 43380944 -209875639 + CT-rich Low_complexity Low_complexity 2 45 0 213 39 0 0 chr2 43380944 43380970 -209875613 + (CA)n Simple_repeat Simple_repeat 1 26 0 22 0 0 0 chr2 43383417 43383439 -209873144 + AT_rich Low_complexity Low_complexity 1 22 0 212 366 125 36 chr2 43383925 43384565 -209872018 - L2 LINE L2 -654 2660 1964 431 247 74 107 chr2 43384745 43385016 -209871567 + MLT1I LTR MaLR 63 300 -109 279 176 0 153 chr2 43384996 43385127 -209871456 + MLT1I LTR MaLR 317 541 -8 * 3265 127 8 21 chr2 43387409 43387930 -209868653 + MER75 DNA T2_type 1 514 0 27 29 0 0 chr2 43388133 43388167 -209868416 + AT_rich Low_complexity Low_complexity 1 34 0 272 284 147 18 chr2 43388538 43388647 -209867936 + L2 LINE L2 3142 3264 -8 2320 113 0 0 chr2 43388721 43389030 -209867553 - AluSx SINE Alu -3 309 1 1600 209 94 92 chr2 43389378 43389776 -209866807 - MLT1F1 LTR MaLR 0 567 141 2256 114 3 3 chr2 43389776 43390084 -209866499 + AluSx SINE Alu 3 310 -2 1600 209 94 92 chr2 43390084 43390216 -209866367 - MLT1F1 LTR MaLR -426 141 11 204 412 20 0 chr2 43390772 43390874 -209865709 + MER5A DNA MER1_type 13 116 -73 2016 181 31 28 chr2 43391551 43392106 -209864477 + MLT2A2 LTR ERVL 1 554 0 524 343 54 57 chr2 43392440 43393209 -209863374 - L2 LINE L2 -6 3307 2364 2178 157 98 3 chr2 43395179 43395568 -209861015 + MSTB LTR MaLR 1 426 0 281 235 59 12 chr2 43395992 43396077 -209860506 + MER5B DNA MER1_type 90 178 0 303 190 25 51 chr2 43396090 43396169 -209860414 + L1MC1 LINE L1 5194 5270 -876 4982 142 32 78 chr2 43396190 43397215 -209859368 + L1MC1 LINE L1 5356 6333 0 316 177 269 77 chr2 43397242 43397372 -209859211 + MER5A DNA MER1_type 9 163 -26 658 243 35 18 chr2 43397654 43397823 -209858760 + MER97c DNA MER1_type? 8 179 -911 180 327 220 31 chr2 43398284 43398443 -209858140 + MER5A DNA MER1_type 1 189 0 303 28 0 0 chr2 43398718 43398754 -209857829 + (CA)n Simple_repeat Simple_repeat 1 36 0 326 326 10 0 chr2 43399187 43399285 -209857298 + MIR3 SINE MIR 108 206 -2 362 96 84 12 chr2 43399698 43399781 -209856802 + L1MB4 LINE L1 6086 6174 -6 10442 212 36 53 chr2 43400531 43402243 -209854340 + L1P LINE L1 3 1640 -4506 2255 110 3 0 chr2 43402243 43402543 -209854040 + AluSx SINE Alu 1 301 -11 10442 212 36 53 chr2 43402543 43403867 -209852716 + L1P LINE L1 1640 2986 -3160 4867 49 0 0 chr2 43404742 43405334 -209851249 + L1PA4 LINE L1 5560 6151 -4 223 366 0 12 chr2 43405856 43405938 -209850645 + L2 LINE L2 3184 3264 -8 732 189 8 0 chr2 43406106 43406233 -209850350 + Tigger7 DNA MER2_type 2460 2587 0 24 53 0 0 chr2 43406818 43406856 -209849727 + AT_rich Low_complexity Low_complexity 1 38 0 1405 171 97 40 chr2 43407955 43408276 -209848307 + MER44D DNA MER2_type 1 609 0 25 0 0 0 chr2 43409129 43409154 -209847429 + AT_rich Low_complexity Low_complexity 1 25 0 181 198 23 23 chr2 43409747 43409833 -209846750 + (CATATA)n Simple_repeat Simple_repeat 3 88 0 735 293 34 37 chr2 43410748 43411045 -209845538 + MLT1J LTR MaLR 216 511 0 1217 217 38 61 chr2 43412217 43412609 -209843974 - MLT2C1 LTR ERVL -2 395 13 243 390 21 0 chr2 43413404 43413499 -209843084 + MIR3 SINE MIR 73 169 -39 221 269 19 0 chr2 43413619 43413686 -209842897 + GA-rich Low_complexity Low_complexity 4 110 0 827 251 62 13 chr2 43413741 43413968 -209842615 - Charlie8 DNA MER1_type -2141 276 39 821 119 33 0 chr2 43413982 43414133 -209842450 + MER96B DNA MER1_type? 23 178 -239 238 272 155 60 chr2 43414394 43414626 -209841957 - MIR SINE MIR -3 259 6 190 320 107 25 chr2 43415486 43415608 -209840975 + L2 LINE L2 3179 3310 -3 2244 109 13 0 chr2 43417486 43417789 -209838794 - AluSx SINE Alu -5 307 1 27 49 0 0 chr2 43418182 43418223 -209838360 + AT_rich Low_complexity Low_complexity 1 41 0 198 167 0 0 chr2 43418842 43418878 -209837705 + (ATG)n Simple_repeat Simple_repeat 2 37 0 1383 70 5 0 chr2 43418924 43419109 -209837474 - L1PB1 LINE L1 0 6151 5966 385 241 36 27 chr2 43419454 43419566 -209837017 + MIR3 SINE MIR 89 201 -7 1874 149 187 15 chr2 43420157 43420532 -209836051 + MSTB LTR MaLR 6 425 -1 371 211 49 84 chr2 43421082 43421224 -209835359 - MLT1J LTR MaLR -372 139 3 23 0 0 0 chr2 43421702 43421725 -209834858 + AT_rich Low_complexity Low_complexity 1 23 0 2016 160 68 27 chr2 43421864 43422302 -209834281 + MSTB2 LTR MaLR 1 456 -1 28 48 0 0 chr2 43422347 43422389 -209834194 + AT_rich Low_complexity Low_complexity 1 42 0 23 54 0 0 chr2 43422420 43422457 -209834126 + AT_rich Low_complexity Low_complexity 1 37 0 2114 126 0 16 chr2 43422801 43423118 -209833465 - AluSx SINE Alu 0 312 1 444 90 22 75 chr2 43423588 43423722 -209832861 + (GGAAA)n Simple_repeat Simple_repeat 4 130 0 244 262 84 0 chr2 43423739 43423846 -209832737 + L1MEd LINE L1 87 202 -5917 2571 43 0 3 chr2 43424337 43424637 -209831946 - AluY SINE Alu -12 299 1 21 36 0 0 chr2 43424711 43424739 -209831844 + AT_rich Low_complexity Low_complexity 1 28 0 570 292 35 67 chr2 43425669 43425984 -209830599 - L2 LINE L2 0 3313 3009 311 333 54 0 chr2 43426306 43426417 -209830166 - L2 LINE L2 -7 3306 3190 913 274 0 5 chr2 43426448 43426663 -209829920 - MIR SINE MIR -26 236 23 25 51 0 0 chr2 43427138 43427177 -209829406 + AT_rich Low_complexity Low_complexity 1 39 0 183 279 157 76 chr2 43428217 43428389 -209828194 + MIR SINE MIR 9 194 -68 1744 193 25 50 chr2 43429109 43429432 -209827151 - MSTD LTR MaLR -6 390 77 2215 99 7 0 chr2 43429432 43429725 -209826858 + AluSg SINE Alu 1 295 -15 1744 193 25 50 chr2 43429725 43429801 -209826782 - MSTD LTR MaLR -319 77 1 1281 199 75 126 chr2 43429842 43429905 -209826678 - MLT1D LTR MaLR 0 505 440 410 35 0 0 chr2 43429905 43429962 -209826621 + L1MA7 LINE L1 6235 6291 0 1281 199 75 126 chr2 43429962 43430110 -209826473 - MLT1D LTR MaLR -65 440 286 2467 63 0 0 chr2 43430110 43430413 -209826170 + AluY SINE Alu 1 303 -8 1281 199 75 126 chr2 43430413 43430732 -209825851 - MLT1D LTR MaLR -219 286 1 415 321 43 22 chr2 43430762 43430946 -209825637 + L2 LINE L2 2634 2821 -493 2053 135 3 7 chr2 43430960 43431264 -209825319 - AluSq SINE Alu -10 303 1 277 272 153 61 chr2 43431267 43431495 -209825088 + MER112 DNA MER1_type 12 260 0 423 313 180 39 chr2 43431495 43431901 -209824682 + L2 LINE L2 2851 3313 0 23 54 0 0 chr2 43431964 43432001 -209824582 + AT_rich Low_complexity Low_complexity 1 37 0 393 323 126 6 chr2 43432015 43432182 -209824401 - MIR SINE MIR -2 260 74 415 265 98 15 chr2 43432248 43432380 -209824203 - MIR SINE MIR -104 158 16 221 256 81 0 chr2 43432390 43432476 -209824107 + MER5A DNA MER1_type 4 96 -93 1389 267 63 70 chr2 43432571 43433130 -209823453 - HAL1b LINE L1 -186 1162 613 2139 122 0 3 chr2 43433130 43433424 -209823159 - AluSg SINE Alu -15 295 3 1389 267 63 70 chr2 43433424 43433981 -209822602 - HAL1b LINE L1 -735 613 54 641 335 38 8 chr2 43434969 43435208 -209821375 + MIR SINE MIR 17 262 0 1685 195 35 24 chr2 43435213 43435583 -209821000 - MLT1A2 LTR MaLR 0 374 1 861 288 102 11 chr2 43435778 43436063 -209820520 - L2 LINE L2 0 3313 3003 256 341 188 5 chr2 43436119 43436327 -209820256 - L2 LINE L2 -407 2907 2662 497 294 87 26 chr2 43436927 43437158 -209819425 + MIR SINE MIR 12 256 -6 233 280 119 36 chr2 43437401 43437569 -209819014 - L2 LINE L2 -832 2482 2301 355 305 165 47 chr2 43437674 43437953 -209818630 - L2 LINE L2 -343 2971 2660 1295 200 12 47 chr2 43438256 43438590 -209817993 - L1M3 LINE L1 -648 7105 6794 360 148 0 0 chr2 43438596 43438657 -209817926 + (TA)n Simple_repeat Simple_repeat 2 62 0 2131 199 91 35 chr2 43438657 43439264 -209817319 - L1M3 LINE L1 -762 6803 6163 3003 148 46 28 chr2 43439266 43439880 -209816703 + L1MA10 LINE L1 5710 6334 0 1931 146 3 3 chr2 43439963 43440258 -209816325 + AluSc SINE Alu 5 299 -10 425 219 90 34 chr2 43440323 43440649 -209815934 - LTR37B LTR ERV1 -9 459 114 * 606 161 24 24 chr2 43440646 43440770 -209815813 - MER3 DNA MER1_type -76 133 10 2568 49 3 0 chr2 43440799 43441106 -209815477 + AluY SINE Alu 1 308 -3 2440 91 0 0 chr2 43441130 43441439 -209815144 - AluSg SINE Alu -1 309 1 428 143 29 105 chr2 43441439 43441544 -209815039 - LTR37B LTR ERV1 -371 97 1 242 260 87 29 chr2 43441618 43441722 -209814861 + L1MEd LINE L1 498 607 -5512 314 363 59 0 chr2 43442200 43442335 -209814248 + MIR SINE MIR 49 191 -71 1764 157 28 0 chr2 43442345 43442664 -209813919 + L1MA5 LINE L1 5973 6300 0 787 319 89 52 chr2 43442808 43443506 -209813077 - L1M4 LINE L1 -3313 2833 2110 1798 155 0 35 chr2 43443675 43443985 -209812598 - AluJb SINE Alu -11 301 3 426 324 78 35 chr2 43444060 43444665 -209811918 - L1ME3A LINE L1 -241 5929 5299 399 276 62 26 chr2 43444982 43445322 -209811261 - L1M3 LINE L1 -1524 6041 5690 6247 174 27 4 chr2 43445330 43447168 -209809415 - L1MC1 LINE L1 -20 6296 4413 420 268 71 6 chr2 43447183 43447366 -209809217 - L1MC1 LINE L1 -2154 3975 3781 1437 146 8 20 chr2 43447726 43447972 -209808611 - AluSg/x SINE Alu -3 307 65 1984 140 0 59 chr2 43448049 43448405 -209808178 + MER1B DNA MER1_type 1 335 -2 227 324 50 11 chr2 43448613 43448792 -209807791 - L1M3 LINE L1 -4564 3001 2816 22 35 0 0 chr2 43448904 43448933 -209807650 + AT_rich Low_complexity Low_complexity 1 29 0 1768 168 0 14 chr2 43448998 43449295 -209807288 + AluSx SINE Alu 3 295 -17 424 272 43 47 chr2 43449310 43449545 -209807038 - L1MC1 LINE L1 -4990 1129 896 234 0 0 0 chr2 43450202 43450228 -209806355 + (TG)n Simple_repeat Simple_repeat 2 27 0 597 294 44 66 chr2 43451980 43452218 -209804365 - MARNA DNA Mariner -52 534 292 2116 84 0 0 chr2 43452218 43452491 -209804092 + AluY SINE Alu 35 307 -4 597 294 44 66 chr2 43452491 43452749 -209803834 - MARNA DNA Mariner -294 292 49 1252 171 44 0 chr2 43453189 43453440 -209803143 - L1MA9 LINE L1 0 6312 6051 220 222 28 0 chr2 43453790 43453862 -209802721 + (TA)n Simple_repeat Simple_repeat 2 75 0 240 86 0 0 chr2 43453903 43453938 -209802645 + (TG)n Simple_repeat Simple_repeat 2 36 0 613 201 178 67 chr2 43455310 43455697 -209800886 + MLT1E2 LTR MaLR 90 563 -61 189 252 92 84 chr2 43455717 43455836 -209800747 - MIR SINE MIR -139 123 4 596 275 29 74 chr2 43456194 43456438 -209800145 + MIR SINE MIR 8 240 -22 398 107 48 19 chr2 43456519 43456622 -209799961 + (TA)n Simple_repeat Simple_repeat 2 107 0 401 261 58 36 chr2 43456711 43456849 -209799734 - MER5A DNA MER1_type 0 189 49 310 340 39 26 chr2 43456713 43456866 -209799717 + MER5A DNA MER1_type 17 171 -18 * 256 200 0 0 chr2 43457413 43457463 -209799120 + MER69 DNA AcHobo 86 135 -2391 234 326 23 23 chr2 43458675 43458761 -209797822 - L2 LINE L2 -53 3219 3134 245 314 70 22 chr2 43458828 43458986 -209797597 + MIR SINE MIR 20 182 -66 326 290 121 45 chr2 43459610 43460166 -209796417 + L2 LINE L2 2626 3224 -89 2085 115 4 0 chr2 43460381 43460659 -209795924 - AluSg SINE Alu -31 279 1 275 406 57 11 chr2 43460832 43461115 -209795468 - L2 LINE L2 -620 2694 2399 320 273 61 30 chr2 43462063 43462162 -209794421 - MIR SINE MIR -70 138 37 388 350 32 38 chr2 43463765 43464079 -209792504 + L2 LINE L2 2162 2473 -841 3854 185 48 5 chr2 43464284 43465240 -209791343 + L1MD2 LINE L1 5133 6129 -230 909 126 0 30 chr2 43465242 43465377 -209791206 + FLAM_C SINE Alu 3 133 -10 563 294 13 35 chr2 43465387 43465615 -209790968 + L1MD2 LINE L1 6119 6341 -18 2365 153 45 41 chr2 43466105 43466570 -209790013 - MLT1C LTR MaLR 0 467 1 2667 148 18 11 chr2 43467083 43467537 -209789046 - LTR32 LTR ERVL 0 471 15 2047 75 14 3 chr2 43468363 43468656 -209787927 + L1PA14 LINE L1 5865 6160 -1 231 349 36 12 chr2 43469742 43469825 -209786758 - L2 LINE L2 -5 3267 3183 207 0 0 0 chr2 43470815 43470838 -209785745 + (CAT)n Simple_repeat Simple_repeat 1 23 0 650 268 105 5 chr2 43470838 43471047 -209785536 - MIR SINE MIR -8 254 25 1678 182 67 21 chr2 43471467 43471840 -209784743 - MLT1B LTR MaLR 0 390 1 5774 110 80 0 chr2 43472408 43473386 -209783197 - L1PA14 LINE L1 -2 6159 5162 285 330 15 64 chr2 43474205 43474373 -209782210 - MER91 DNA MER1_type 0 190 41 285 51 0 0 chr2 43474436 43474475 -209782108 + (CA)n Simple_repeat Simple_repeat 1 39 0 581 263 122 5 chr2 43474715 43474928 -209781655 + Charlie1 DNA MER1_type 1 238 -2523 * 663 191 7 0 chr2 43474911 43475052 -209781531 + Charlie1 DNA MER1_type 2620 2761 0 338 281 49 0 chr2 43475180 43475262 -209781321 + MIR SINE MIR 29 114 -148 185 294 150 31 chr2 43475953 43476113 -209780470 - L3 LINE CR1 -27 1550 1372 285 93 0 0 chr2 43476535 43476589 -209779994 - Charlie5 DNA MER1_type -87 2525 2472 21 89 0 0 chr2 43476863 43476919 -209779664 + AT_rich Low_complexity Low_complexity 1 56 0 2071 109 3 3 chr2 43477923 43478237 -209778346 + AluSq SINE Alu 1 314 0 990 197 133 0 chr2 43478465 43478744 -209777839 + MER33 DNA MER1_type 4 319 -5 23 0 0 0 chr2 43478974 43478997 -209777586 + AT_rich Low_complexity Low_complexity 1 23 0 2671 36 0 0 chr2 43479165 43479470 -209777113 + AluYa5 SINE Alu 1 305 -6 194 281 35 0 chr2 43479877 43479934 -209776649 - L2 LINE L2 0 3313 3255 518 277 92 62 chr2 43480028 43480558 -209776025 - L2 LINE L2 -64 3249 2701 1633 149 16 0 chr2 43480672 43480914 -209775669 + AluJo SINE Alu 1 246 -66 399 309 91 19 chr2 43481107 43481317 -209775266 - MIR SINE MIR -14 248 24 26 30 0 0 chr2 43481984 43482017 -209774566 + AT_rich Low_complexity Low_complexity 1 33 0 339 223 78 10 chr2 43482621 43482724 -209773859 - MLT1J2 LTR MaLR -340 110 1 1834 175 3 0 chr2 43482972 43483269 -209773314 + AluJb SINE Alu 1 298 -14 26 62 0 15 chr2 43485153 43485179 -209771404 + AT_rich Low_complexity Low_complexity 1 26 -38 2092 136 0 0 chr2 43485179 43485474 -209771109 + AluSx SINE Alu 5 299 -13 26 62 0 15 chr2 43485474 43485512 -209771071 + AT_rich Low_complexity Low_complexity 26 64 0 270 250 47 0 chr2 43485719 43485783 -209770800 + MLT1L LTR MaLR 2 68 -547 24 0 0 0 chr2 43485872 43485896 -209770687 + AT_rich Low_complexity Low_complexity 1 24 0 210 266 0 31 chr2 43485915 43485979 -209770604 + GA-rich Low_complexity Low_complexity 4 65 0 276 324 56 28 chr2 43486101 43486243 -209770340 - MIR SINE MIR -51 211 66 1340 246 120 5 chr2 43486479 43486870 -209769713 - MLT1H LTR MaLR -113 436 1 756 203 17 23 chr2 43487558 43487735 -209768848 + MER5B DNA MER1_type 1 176 -2 399 271 124 49 chr2 43487873 43488098 -209768485 + MIR SINE MIR 8 249 -13 333 208 179 98 chr2 43488811 43488883 -209767700 + L2 LINE L2 3127 3192 -121 1000 210 36 18 chr2 43488883 43489102 -209767481 + MER58A DNA MER1_type 2 224 0 333 208 179 98 chr2 43489102 43489202 -209767381 + L2 LINE L2 3192 3313 0 309 271 10 0 chr2 43489303 43489399 -209767184 - MIR3 SINE MIR -23 185 89 247 303 61 30 chr2 43490109 43490241 -209766342 - L2 LINE L2 -1 3271 3136 261 0 0 0 chr2 43490617 43490646 -209765937 + (A)n Simple_repeat Simple_repeat 1 29 0 433 301 164 11 chr2 43490682 43490865 -209765718 - L3 LINE CR1 -28 1549 1339 230 299 84 56 chr2 43491572 43491679 -209764904 + L3 LINE CR1 35 144 -1433 545 186 228 0 chr2 43491912 43492057 -209764526 - MIR SINE MIR -34 228 51 369 208 52 0 chr2 43492748 43492825 -209763758 + MER112 DNA MER1_type 6 86 -174 225 0 0 0 chr2 43493231 43493256 -209763327 + (CA)n Simple_repeat Simple_repeat 2 26 0 209 271 0 0 chr2 43494187 43494235 -209762348 + GA-rich Low_complexity Low_complexity 2 49 0 867 193 0 0 chr2 43494470 43494615 -209761968 + MER3 DNA MER1_type 2 146 -63 216 91 45 23 chr2 43494876 43494920 -209761663 + T-rich Low_complexity Low_complexity 3 47 0 195 248 120 77 chr2 43495143 43495260 -209761323 + MIR SINE MIR 20 141 -67 271 302 216 0 chr2 43496142 43496258 -209760325 - MIR3 SINE MIR -9 199 59 291 344 11 0 chr2 43496271 43496361 -209760222 + MER81 DNA DNA 1 91 -23 468 182 57 0 chr2 43496371 43496459 -209760124 + MER81 DNA DNA 22 114 0 291 338 50 12 chr2 43497221 43497381 -209759202 - MIR SINE MIR -36 226 61 261 0 0 0 chr2 43501207 43501236 -209755347 + (A)n Simple_repeat Simple_repeat 1 29 0 403 271 47 18 chr2 43501842 43502012 -209754571 - MER104 DNA MER2_type -1 179 5 372 353 37 0 chr2 43502076 43502212 -209754371 + MLT1I LTR MaLR 81 221 -188 1632 115 138 15 chr2 43502332 43502592 -209753991 - AluSx SINE Alu -20 292 1 686 189 23 0 chr2 43502644 43502776 -209753807 + AluJo SINE Alu 2 136 -176 328 206 0 41 chr2 43502780 43502853 -209753730 + MLT1I LTR MaLR 336 405 -4 4635 22 0 0 chr2 43502954 43503487 -209753096 - L1P LINE L1 -1634 4512 3980 7253 43 6 1 chr2 43503487 43504780 -209751803 + L1PA4 LINE L1 4863 6136 -19 221 323 21 54 chr2 43504780 43504873 -209751710 - MIR SINE MIR -81 127 38 1837 134 0 4 chr2 43505077 43505338 -209751245 + AluSq SINE Alu 1 260 -53 5415 161 21 24 chr2 43507484 43507726 -209748857 + L1PB3 LINE L1 4808 5049 -1105 1785 159 85 23 chr2 43507726 43508079 -209748504 + THE1C LTR MaLR 1 375 0 5415 161 21 24 chr2 43508079 43508438 -209748145 + L1PB3 LINE L1 5049 5407 -747 2138 109 46 60 chr2 43508438 43508805 -209747778 + THE1B LTR MaLR 1 362 -2 5415 161 21 24 chr2 43508805 43509556 -209747027 + L1PB3 LINE L1 5407 6147 -7 29 0 0 0 chr2 43509556 43509585 -209746998 + AT_rich Low_complexity Low_complexity 1 29 0 665 50 0 20 chr2 43509724 43509823 -209746760 + (TCTCCC)n Simple_repeat Simple_repeat 1 97 0 7008 63 18 55 chr2 43509823 43512403 -209744180 + SVA Other Other 57 1386 0 432 301 157 0 chr2 43512600 43512753 -209743830 - MLT1J2 LTR MaLR -267 183 7 270 159 143 16 chr2 43512940 43513003 -209743580 + MER103 DNA DNA 13 83 -83 1262 128 25 0 chr2 43513200 43513396 -209743187 + L1PB4 LINE L1 5766 5966 -190 273 331 0 0 chr2 43513962 43514083 -209742500 + (CATATA)n Simple_repeat Simple_repeat 6 126 0 350 214 48 0 chr2 43514084 43514168 -209742415 + L1MC4 LINE L1 6613 6700 -1342 498 245 0 42 chr2 43514169 43514458 -209742125 + (CATATA)n Simple_repeat Simple_repeat 1 276 0 392 292 49 7 chr2 43514649 43514793 -209741790 - L2 LINE L2 0 3313 3164 1306 257 85 19 chr2 43515401 43516038 -209740545 - L1ME3A LINE L1 -344 5826 5151 1309 215 116 53 chr2 43516141 43516777 -209739806 - L1MC5 LINE L1 -26 7935 7260 1050 206 60 108 chr2 43516937 43517402 -209739181 - L1MC5 LINE L1 -746 7215 6773 643 181 57 105 chr2 43517405 43517615 -209738968 + LTR16A1 LTR ERVL 4 203 -254 270 0 0 0 chr2 43517737 43517767 -209738816 + (CA)n Simple_repeat Simple_repeat 2 31 0 532 289 13 0 chr2 43517772 43517931 -209738652 + LTR16A1 LTR ERVL 297 457 0 2435 77 0 3 chr2 43518141 43518438 -209738145 - AluY SINE Alu -15 296 1 2113 113 0 21 chr2 43518438 43518729 -209737854 - AluSx SINE Alu -5 307 23 280 244 222 0 chr2 43519504 43519594 -209736989 + L2 LINE L2 3200 3309 -4 1590 245 43 19 chr2 43519938 43520354 -209736229 + L1MCb LINE L1 3 428 -5617 * 6515 151 52 103 chr2 43520352 43520604 -209735979 + L1MC3 LINE L1 6102 6365 -1420 3000 119 117 0 chr2 43520604 43521073 -209735510 - MER1A DNA MER1_type 0 527 4 6515 151 52 103 chr2 43521073 43521325 -209735258 + L1MC3 LINE L1 6365 6628 -1157 441 73 0 0 chr2 43521325 43521380 -209735203 - Charlie3 DNA MER1_type -4 2706 2652 6515 151 52 103 chr2 43521380 43522467 -209734116 + L1MC3 LINE L1 6628 7663 -122 1098 100 13 0 chr2 43522467 43522617 -209733966 - THE1B LTR MaLR 0 364 213 462 113 188 0 chr2 43522604 43522684 -209733899 - THE1B LTR MaLR -268 96 2 * 515 171 103 17 chr2 43522685 43522802 -209733781 + L1MC3 LINE L1 7659 7785 0 349 343 61 24 chr2 43523368 43523581 -209733002 - MLT1K LTR MaLR -358 230 10 302 296 35 9 chr2 43523974 43524089 -209732494 + MIR3 SINE MIR 43 160 -48 283 266 62 53 chr2 43524245 43524358 -209732225 + L2 LINE L2 3158 3271 -1 2382 127 85 10 chr2 43525063 43525465 -209731118 + MSTB1 LTR MaLR 1 432 0 491 274 14 55 chr2 43525965 43526133 -209730450 - MIR SINE MIR -54 208 50 311 272 88 18 chr2 43527531 43527645 -209728938 - MIR SINE MIR -78 184 63 * 3656 260 117 21 chr2 43527622 43529033 -209727550 - L2 LINE L2 -475 2839 1293 1986 165 0 19 chr2 43529476 43529792 -209726791 + AluSg SINE Alu 1 310 0 245 200 0 0 chr2 43530375 43530420 -209726163 - MLT1E LTR MaLR 0 567 523 2254 125 3 0 chr2 43530448 43530760 -209725823 + AluSq SINE Alu 1 313 0 1463 181 70 0 chr2 43530771 43531030 -209725553 - AluJo SINE Alu -30 282 6 1331 241 88 60 chr2 43531037 43531114 -209725469 - MLT1E LTR MaLR -37 556 483 1867 146 4 0 chr2 43531114 43531419 -209725164 - AluSg SINE Alu 0 306 1 1331 241 88 60 chr2 43531419 43531875 -209724708 - MLT1E LTR MaLR -110 483 7 356 281 112 15 chr2 43533696 43533892 -209722691 + L2 LINE L2 1795 2009 -1305 1686 61 61 0 chr2 43535356 43535584 -209720999 + L1PA5 LINE L1 5911 6152 -2 476 256 60 36 chr2 43536807 43536904 -209719679 + MIR SINE MIR 72 176 -86 1152 219 0 0 chr2 43536904 43537123 -209719460 - MER20 DNA MER1_type 0 219 1 476 256 60 36 chr2 43537123 43537193 -209719390 + MIR SINE MIR 176 243 -19 1143 300 47 66 chr2 43537694 43538420 -209718163 - L3 LINE CR1 -159 1418 707 756 212 42 60 chr2 43538491 43538627 -209717956 + MER58A DNA MER1_type 10 142 -2278 2343 116 3 0 chr2 43538627 43538937 -209717646 + AluSp SINE Alu 1 311 -2 756 212 42 60 chr2 43538937 43539017 -209717566 + MER58A DNA MER1_type 142 222 -2 2220 172 16 35 chr2 43539846 43540277 -209716306 + MSTB LTR MaLR 1 423 -3 480 304 52 0 chr2 43540423 43540558 -209716025 + MIR SINE MIR 111 252 -10 428 226 36 36 chr2 43540908 43541076 -209715507 - MLT1J LTR MaLR -16 495 328 723 199 37 7 chr2 43541079 43541215 -209715368 + MER5A DNA MER1_type 16 155 -34 810 229 33 38 chr2 43542523 43542763 -209713820 - MIR SINE MIR -16 246 8 23 33 0 0 chr2 43542909 43542939 -209713644 + AT_rich Low_complexity Low_complexity 1 30 0 1216 184 105 113 chr2 43543235 43543750 -209712833 - MER67D LTR ERV1 -1 513 3 993 277 74 32 chr2 43544474 43544839 -209711744 + LTR26 LTR ERV1 55 440 -163 1874 134 22 0 chr2 43544839 43545107 -209711476 + AluSx SINE Alu 30 303 -9 993 277 74 32 chr2 43545107 43545145 -209711438 + LTR26 LTR ERV1 440 475 -128 482 351 66 54 chr2 43545484 43546659 -209709924 + PABL_B-int LTR ERV1 2654 3843 -3279 210 292 0 56 chr2 43546958 43547047 -209709536 - MIR3 SINE MIR -3 205 122 327 230 0 0 chr2 43547434 43547508 -209709075 + L1MC5 LINE L1 7828 7901 -60 1946 161 3 0 chr2 43547680 43547979 -209708604 + AluJo SINE Alu 6 305 -7 508 273 25 0 chr2 43547998 43548119 -209708464 + MER5B DNA MER1_type 53 176 -2 198 0 0 0 chr2 43548880 43548902 -209707681 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 438 292 89 12 chr2 43548965 43549133 -209707450 - MIR3 SINE MIR -24 184 4 307 235 156 84 chr2 43549980 43550159 -209706424 + L2 LINE L2 3122 3313 0 248 250 18 0 chr2 43550735 43550791 -209705792 + GA-rich Low_complexity Low_complexity 5 61 0 3704 30 0 101 chr2 43551128 43551663 -209704920 + L1PA4 LINE L1 5675 6155 0 186 366 12 0 chr2 43551925 43552007 -209704576 - MIR SINE MIR 0 262 180 579 161 195 0 chr2 43552007 43552125 -209704458 + MLT1J LTR MaLR 1 141 -370 273 297 23 86 chr2 43552724 43552852 -209703731 - MIR SINE MIR -96 166 47 212 240 0 20 chr2 43553254 43553304 -209703279 + MIR SINE MIR 69 117 -91 436 298 86 41 chr2 43554239 43554484 -209702099 - MIR SINE MIR -6 256 1 276 296 17 81 chr2 43554573 43554745 -209701838 + MLT1L LTR MaLR 1 161 -454 206 207 35 17 chr2 43554850 43554908 -209701675 + CT-rich Low_complexity Low_complexity 2 60 0 441 293 24 6 chr2 43555022 43555189 -209701394 + MLT1L LTR MaLR 444 613 -2 2026 156 25 3 chr2 43555299 43555657 -209700926 - MER47A DNA MER2_type 0 366 1 677 205 0 0 chr2 43556581 43556693 -209699890 - MER81 DNA DNA 0 114 3 1104 224 5 0 chr2 43557595 43557809 -209698774 + MER20B DNA MER1_type 1 215 -4 1709 162 0 11 chr2 43558072 43558344 -209698239 - AluJb SINE Alu 0 312 44 332 91 0 0 chr2 43558495 43558539 -209698044 + U6 snRNA snRNA 1 44 -63 21 57 0 0 chr2 43558616 43558651 -209697932 + AT_rich Low_complexity Low_complexity 1 35 0 4367 171 70 66 chr2 43559483 43560697 -209695886 - L1MC2 LINE L1 -14 6748 5551 1671 194 3 10 chr2 43560697 43561007 -209695576 + AluSx SINE Alu 1 308 -4 4367 171 70 66 chr2 43561007 43561369 -209695214 - L1MC2 LINE L1 -1211 5551 5192 955 157 34 60 chr2 43561376 43561611 -209694972 + MER46A DNA MER2_type 8 236 0 8063 229 50 14 chr2 43561611 43562109 -209694474 - L1MC2 LINE L1 -1371 5193 4714 2425 83 0 0 chr2 43562109 43562410 -209694173 - AluY SINE Alu -10 301 1 8063 229 50 14 chr2 43562410 43562701 -209693882 - L1MC2 LINE L1 -1850 4714 4435 1854 163 49 69 chr2 43562701 43563167 -209693416 - MSTB2 LTR MaLR 0 457 1 8063 229 50 14 chr2 43563167 43563385 -209693198 - L1MC2 LINE L1 -2129 4435 4226 7854 130 19 9 chr2 43563385 43564670 -209691913 + HSMAR2 DNA Mariner 4 1301 -1 8063 229 50 14 chr2 43564670 43566547 -209690036 - L1MC2 LINE L1 -2338 4226 2203 2693 194 78 79 chr2 43566570 43567873 -209688710 - L1MC2 LINE L1 -4850 1195 1 6050 92 42 0 chr2 43568832 43570334 -209686249 + L1PA11 LINE L1 4623 6166 -8 1650 272 52 14 chr2 43570988 43571484 -209685099 + MLT2E LTR ERVL 1 515 -113 902 225 45 0 chr2 43571541 43571741 -209684842 - MER63A DNA MER1_type -1 209 1 917 79 36 0 chr2 43572000 43572139 -209684444 + L1MA2 LINE L1 5806 5949 -355 226 316 152 32 chr2 43572169 43572419 -209684164 + HAL1b LINE L1 366 645 -703 387 0 0 0 chr2 43572727 43572770 -209683813 + (TG)n Simple_repeat Simple_repeat 2 44 0 1016 145 0 0 chr2 43572775 43572920 -209683663 - AluSq SINE Alu -35 278 134 1099 288 35 44 chr2 43573029 43573481 -209683102 - LTR16A1 LTR ERVL 0 457 10 237 305 0 0 chr2 43573564 43573646 -209682937 + L1MA10 LINE L1 4765 4846 -1300 308 210 0 0 chr2 43573647 43573709 -209682874 - L1MC4 LINE L1 -1339 6703 6642 5186 175 30 8 chr2 43573714 43575163 -209681420 + L1MA10 LINE L1 4848 6327 -7 275 310 47 15 chr2 43575198 43575680 -209680903 + L1 LINE L1 2266 2762 -3384 1602 256 100 24 chr2 43575708 43575902 -209680681 + MLT1E LTR MaLR 1 179 -414 2311 172 24 7 chr2 43575902 43576321 -209680262 + MSTB LTR MaLR 1 426 0 1602 256 100 24 chr2 43576321 43576677 -209679906 + MLT1E LTR MaLR 179 593 0 1342 241 28 23 chr2 43576677 43577212 -209679371 + MLT1E-int LTR MaLR 15 663 -708 335 349 18 12 chr2 43577324 43577490 -209679093 + MLT1E-int LTR MaLR 692 858 -513 223 232 29 0 chr2 43577882 43577951 -209678632 + (TA)n Simple_repeat Simple_repeat 2 72 0 521 150 16 31 chr2 43577961 43578088 -209678495 + L1MC4 LINE L1 7918 8042 0 291 176 139 19 chr2 43578232 43578340 -209678243 + L1MC5 LINE L1 7807 7927 -34 2163 117 7 3 chr2 43578348 43578639 -209677944 + AluSx SINE Alu 1 292 -20 220 167 0 0 chr2 43578754 43578790 -209677793 - MIR SINE MIR -108 154 119 266 328 26 35 chr2 43579648 43579764 -209676819 + MER5B DNA MER1_type 61 175 -3 648 274 174 56 chr2 43579811 43580224 -209676359 - L2 LINE L2 0 3272 2811 318 226 17 70 chr2 43580737 43580852 -209675731 - MIR3 SINE MIR -24 184 76 1425 223 111 29 chr2 43581162 43581713 -209674870 - MER20B DNA MER1_type -1 782 187 1800 244 29 5 chr2 43581720 43581981 -209674602 + L1MD1 LINE L1 89 365 -6175 1683 113 0 32 chr2 43581981 43582229 -209674354 + AluSq SINE Alu 63 302 -11 1800 244 29 5 chr2 43582229 43582385 -209674198 + L1MD1 LINE L1 365 516 -6024 * 1900 149 45 0 chr2 43582373 43582749 -209673834 + L1MD1 LINE L1 1664 2056 -4484 716 131 37 0 chr2 43582756 43582863 -209673720 + AluSc SINE Alu 166 276 -33 813 127 13 13 chr2 43582866 43583024 -209673559 + GA-rich Low_complexity Low_complexity 3 160 0 1552 170 47 87 chr2 43583026 43583598 -209672985 + L1MD1 LINE L1 2011 2559 -3981 2337 96 0 10 chr2 43584725 43585037 -209671546 - AluSq SINE Alu -4 309 1 3112 247 31 9 chr2 43585609 43586499 -209670084 + L1MD1 LINE L1 2637 3546 -2994 * 6272 200 51 39 chr2 43586489 43588428 -209668155 + L1MD1 LINE L1 3901 5878 -758 2191 132 0 0 chr2 43588428 43588724 -209667859 + AluSx SINE Alu 3 298 -14 6272 200 51 39 chr2 43588724 43589487 -209667096 + L1MD1 LINE L1 5878 6630 -6 294 249 98 104 chr2 43589520 43589713 -209666870 - MER20B DNA MER1_type -591 192 1 248 274 24 36 chr2 43589756 43589840 -209666743 - MIR SINE MIR -119 143 61 22 0 0 0 chr2 43589918 43589940 -209666643 + AT_rich Low_complexity Low_complexity 1 22 0 951 312 183 37 chr2 43590030 43591592 -209664991 + L2 LINE L2 1437 3228 -44 25 31 0 0 chr2 43592056 43592088 -209664495 + AT_rich Low_complexity Low_complexity 1 32 0 355 295 121 32 chr2 43592970 43593160 -209663423 + MIR SINE MIR 47 253 -9 187 27 27 54 chr2 43595108 43595145 -209661438 + (TAAAA)n Simple_repeat Simple_repeat 2 37 0 2097 188 10 35 chr2 43595638 43596038 -209660545 - MLT1B LTR MaLR 0 390 1 854 277 98 29 chr2 43596539 43596886 -209659697 + MLT1J2 LTR MaLR 59 429 -21 925 199 39 0 chr2 43597018 43597174 -209659409 + FRAM SINE Alu 1 162 -4 197 283 130 33 chr2 43597362 43597454 -209659129 + MIR SINE MIR 17 117 -91 192 289 0 0 chr2 43597546 43597598 -209658985 + L2 LINE L2 3261 3312 -1 255 274 104 28 chr2 43597913 43598019 -209658564 + L2 LINE L2 3195 3308 -5 1632 284 99 60 chr2 43598901 43599778 -209656805 - L2 LINE L2 -405 2909 1999 545 294 19 12 chr2 43601160 43601320 -209655263 + MER5A DNA MER1_type 1 161 -28 262 276 10 31 chr2 43601732 43601830 -209654753 - MIR SINE MIR -3 259 164 666 210 64 0 chr2 43602066 43602096 -209654487 - L1MA10 LINE L1 -4 6330 6301 1083 243 26 31 chr2 43602096 43602446 -209654137 - L1ME1 LINE L1 -31 6135 5788 187 233 244 12 chr2 43602446 43602532 -209654051 - MIR SINE MIR -117 145 40 292 315 35 28 chr2 43603271 43603414 -209653169 - MIR3 SINE MIR -64 144 1 409 247 215 21 chr2 43603919 43604105 -209652478 - MIR SINE MIR 0 262 41 1873 166 13 0 chr2 43604128 43604429 -209652154 - AluJb SINE Alu -1 311 7 496 239 52 8 chr2 43604481 43604615 -209651968 - MIR SINE MIR -15 247 108 600 233 92 25 chr2 43605614 43605777 -209650806 + MIR SINE MIR 89 262 0 316 296 96 24 chr2 43605970 43606095 -209650488 + MIR SINE MIR 46 179 -83 261 160 20 0 chr2 43606197 43606247 -209650336 - MIR SINE MIR -50 212 162 312 326 157 6 chr2 43606620 43606792 -209649791 - L1MC4a LINE L1 -1860 5948 5751 315 296 43 43 chr2 43607785 43607947 -209648636 + L1ME LINE L1 5305 5466 -2342 362 80 0 0 chr2 43607968 43608018 -209648565 - AluSp/q SINE Alu -6 297 248 344 261 267 15 chr2 43608072 43608267 -209648316 + L1ME LINE L1 5533 5776 -345 269 280 67 8 chr2 43608410 43608521 -209648062 - MIR SINE MIR -43 165 49 2851 84 19 84 chr2 43608852 43609252 -209647331 + MLT2A1 LTR ERVL 1 367 -77 562 13 13 13 chr2 43609252 43609328 -209647255 + (TAGA)n Simple_repeat Simple_repeat 1 76 0 2851 84 19 84 chr2 43609328 43609402 -209647181 + MLT2A1 LTR ERVL 367 444 0 204 67 0 0 chr2 43609795 43609825 -209646758 + (TC)n Simple_repeat Simple_repeat 2 31 0 393 225 158 17 chr2 43609907 43610027 -209646556 + MLT1J LTR MaLR 42 178 -333 401 258 140 27 chr2 43610113 43610299 -209646284 + MLT1J LTR MaLR 301 507 -4 1974 123 49 0 chr2 43610521 43610805 -209645778 - AluSx SINE Alu -14 298 1 277 299 52 14 chr2 43611360 43611541 -209645042 - MIR SINE MIR -2 260 27 1900 141 22 0 chr2 43611545 43611854 -209644729 - AluJo SINE Alu 0 315 1 681 202 59 127 chr2 43611940 43612193 -209644390 + MER106A DNA MER1_type 1 236 0 210 280 53 0 chr2 43612350 43612425 -209644158 - MIR SINE MIR -80 182 104 2186 112 7 0 chr2 43612880 43613174 -209643409 + AluSx SINE Alu 1 296 -16 22 56 0 0 chr2 43613321 43613357 -209643226 + AT_rich Low_complexity Low_complexity 1 36 0 211 304 22 54 chr2 43613763 43613855 -209642728 + MIR3 SINE MIR 99 187 -21 312 185 46 0 chr2 43613860 43613925 -209642658 + MIR3 SINE MIR 131 198 -10 * 369 273 57 0 chr2 43613922 43614010 -209642573 - MIR3 SINE MIR -35 173 81 321 325 13 13 chr2 43615944 43616095 -209640488 + MER5B DNA MER1_type 10 160 -18 670 226 55 167 chr2 43616107 43616361 -209640222 + L1MC4 LINE L1 7414 7695 -347 2350 104 10 0 chr2 43616361 43616670 -209639913 + AluSx SINE Alu 1 312 0 670 226 55 167 chr2 43616670 43617051 -209639532 + L1MC4 LINE L1 7695 7978 -64 1601 161 4 18 chr2 43617069 43617342 -209639241 - AluJo SINE Alu -16 296 28 765 220 62 0 chr2 43617613 43617790 -209638793 - MER5A DNA MER1_type 0 189 2 314 314 19 51 chr2 43618159 43618315 -209638268 - MIR3 SINE MIR -54 154 4 482 301 92 0 chr2 43618344 43618507 -209638076 - MIR SINE MIR -56 206 29 440 292 39 0 chr2 43618671 43618801 -209637782 - MIR SINE MIR -82 180 46 194 339 27 62 chr2 43619482 43619594 -209636989 + MIR SINE MIR 7 114 -148 450 325 96 24 chr2 43619925 43620260 -209636323 - Charlie2 DNA MER1_type -2376 406 48 2649 121 6 6 chr2 43620379 43620743 -209635840 + THE1B LTR MaLR 1 364 0 254 167 0 0 chr2 43621287 43621329 -209635254 + MER5B DNA MER1_type 8 49 -129 723 130 0 0 chr2 43621344 43621444 -209635139 - HY3 scRNA scRNA -1 100 1 670 220 14 21 chr2 43621444 43621585 -209634998 + MER5B DNA MER1_type 37 176 -2 1180 184 104 27 chr2 43621745 43621988 -209634595 - Zaphod DNA AcHobo -48 3983 3705 2582 153 40 16 chr2 43621988 43622412 -209634171 - Tigger2a DNA MER2_type 0 434 1 1180 184 104 27 chr2 43622412 43622505 -209634078 - Zaphod DNA AcHobo -326 3705 3621 798 212 16 0 chr2 43622541 43622725 -209633858 - Zaphod DNA AcHobo -515 3516 3330 1355 140 71 81 chr2 43622725 43623193 -209633390 - THE1C LTR MaLR 0 428 1 * 8123 227 113 47 chr2 43623193 43624231 -209632352 - Zaphod DNA AcHobo -697 3334 2366 1881 131 11 7 chr2 43624231 43624513 -209632070 + AluSx SINE Alu 1 283 -29 8123 227 113 47 chr2 43624513 43625218 -209631365 - Zaphod DNA AcHobo -1665 2366 1709 2130 108 56 0 chr2 43625218 43625505 -209631078 + AluSx SINE Alu 1 303 -9 8123 227 113 47 chr2 43625505 43625998 -209630585 - Zaphod DNA AcHobo -2322 1709 1250 2297 107 78 23 chr2 43625998 43626343 -209630240 - THE1B LTR MaLR 0 364 1 8123 227 113 47 chr2 43626343 43626522 -209630061 - Zaphod DNA AcHobo -2781 1250 1084 1871 126 4 22 chr2 43626522 43626799 -209629784 - AluSx SINE Alu -21 291 20 8123 227 113 47 chr2 43626799 43627384 -209629199 - Zaphod DNA AcHobo -2947 1084 133 505 270 110 6 chr2 43627830 43627993 -209628590 + MIR SINE MIR 2 181 -81 1943 125 0 17 chr2 43628031 43628318 -209628265 + AluSc SINE Alu 2 283 -26 937 159 25 13 chr2 43628418 43628575 -209628008 - AluJo SINE Alu -153 159 1 2815 90 3 0 chr2 43630379 43630733 -209625850 - THE1A LTR MaLR 0 355 1 2104 131 0 3 chr2 43633166 43633471 -209623112 + AluSx SINE Alu 1 304 -8 357 203 0 0 chr2 43635246 43635315 -209621268 + U4 snRNA snRNA 1 69 -76 1459 182 31 21 chr2 43635881 43636172 -209620411 - AluJo SINE Alu -18 294 1 1595 152 25 39 chr2 43636297 43636580 -209620003 + AluSx SINE Alu 1 279 -33 351 283 0 30 chr2 43638042 43638141 -209618442 - L2 LINE L2 0 3272 3177 356 284 107 30 chr2 43638194 43638363 -209618220 - MIR SINE MIR -32 230 49 310 336 40 20 chr2 43638472 43638621 -209617962 + MIR SINE MIR 106 257 -5 180 235 0 0 chr2 43638598 43638632 -209617951 + L2 LINE L2 3239 3272 0 * 195 292 117 44 chr2 43638627 43638764 -209617819 - L3 LINE CR1 -24 1553 1407 2172 115 0 0 chr2 43638922 43639226 -209617357 + AluSx SINE Alu 1 304 -8 1664 165 23 26 chr2 43639657 43639966 -209616617 - AluJo SINE Alu -4 308 1 306 286 125 9 chr2 43639989 43640101 -209616482 + MIR SINE MIR 59 183 -79 1573 199 43 3 chr2 43640103 43640430 -209616153 + MER58B DNA MER1_type 2 341 0 434 268 16 24 chr2 43640797 43640924 -209615659 - MIR3 SINE MIR -4 204 79 219 364 62 0 chr2 43641924 43642053 -209614530 - MIR SINE MIR 0 262 126 466 293 66 6 chr2 43643547 43643728 -209612855 - L3b LINE CR1 -288 1295 1104 210 333 96 45 chr2 43643999 43644197 -209612386 + L2 LINE L2 2554 2761 -553 341 129 0 71 chr2 43644386 43644456 -209612127 - LTR67 LTR ERVL -2 555 491 430 196 22 0 chr2 43644709 43644801 -209611782 + MER53 DNA DNA 2 95 -94 336 207 23 11 chr2 43644724 43644811 -209611772 - MER53 DNA DNA -7 182 95 * 207 184 26 0 chr2 43645268 43645306 -209611277 - MIR SINE MIR -117 145 107 1067 188 29 24 chr2 43645373 43645580 -209611003 - MER58A DNA MER1_type -16 208 1 203 240 120 13 chr2 43646470 43646545 -209610038 - MIR3 SINE MIR -15 193 111 1874 107 3 82 chr2 43646672 43647000 -209609583 - AluSx SINE Alu -8 304 3 796 249 35 42 chr2 43647197 43647438 -209609145 + MIR SINE MIR 19 261 -1 938 241 19 5 chr2 43648691 43648907 -209607676 + MER20 DNA MER1_type 1 219 0 819 181 13 7 chr2 43649236 43649391 -209607192 + AluSx SINE Alu 1 156 -156 232 100 0 0 chr2 43649391 43649431 -209607152 + Alu SINE Alu 262 301 0 907 254 41 29 chr2 43649493 43649737 -209606846 + MIR SINE MIR 16 262 0 2138 113 7 0 chr2 43649797 43650098 -209606485 + AluSx SINE Alu 1 303 -9 229 312 39 0 chr2 43650222 43650299 -209606284 - MIR3 SINE MIR -53 155 76 183 184 0 0 chr2 43650314 43650352 -209606231 + CT-rich Low_complexity Low_complexity 2 39 0 386 280 192 33 chr2 43650817 43651124 -209605459 + L3 LINE CR1 909 1264 -313 2001 134 0 10 chr2 43651285 43651591 -209604992 + AluSx SINE Alu 1 303 -9 396 245 126 123 chr2 43651756 43651778 -209604805 + L1MEd LINE L1 920 940 -5590 1980 158 49 86 chr2 43651778 43652208 -209604375 - MLT2D LTR ERVL 0 414 1 396 245 126 123 chr2 43652208 43652446 -209604137 + L1MEd LINE L1 940 1181 -5349 430 288 61 62 chr2 43652461 43652967 -209603616 + L1MEd LINE L1 1254 1857 -1044 2136 97 3 16 chr2 43652967 43653275 -209603308 + AluY SINE Alu 1 304 -7 430 288 61 62 chr2 43653275 43653457 -209603126 + L1MEd LINE L1 1857 2038 -863 1649 151 0 57 chr2 43653642 43653959 -209602624 + AluJo SINE Alu 12 310 -2 670 271 104 61 chr2 43654115 43654555 -209602028 + MLT1J LTR MaLR 45 503 -8 2751 237 45 43 chr2 43654564 43655369 -209601214 + MER21B LTR ERV1 1 806 -57 347 282 119 62 chr2 43655487 43655769 -209600814 + L1MEd LINE L1 2419 2756 -3890 414 198 28 38 chr2 43655774 43655880 -209600703 + MER21B LTR ERV1 491 595 -268 415 301 32 8 chr2 43655894 43656017 -209600566 + L1MEd LINE L1 2774 2899 -3641 482 295 39 39 chr2 43656026 43656260 -209600323 + L3 LINE CR1 1261 1494 -83 425 315 9 0 chr2 43656285 43656393 -209600190 + L2 LINE L2 3160 3268 -4 224 311 0 0 chr2 43656403 43656464 -209600119 + L3 LINE CR1 1514 1574 -3 416 308 86 43 chr2 43657976 43658068 -209598515 - MIR SINE MIR 0 262 175 2053 144 32 62 chr2 43658068 43658470 -209598113 + MLT1B LTR MaLR 1 390 0 416 308 86 43 chr2 43658470 43658611 -209597972 - MIR SINE MIR -87 175 19 922 257 68 15 chr2 43658658 43659103 -209597480 - MLT1G1 LTR MaLR 0 595 73 592 289 72 0 chr2 43659501 43659681 -209596902 - MIR SINE MIR -13 249 57 238 335 59 20 chr2 43660913 43661065 -209595518 - HAL1 LINE L1 -908 1599 1442 23 0 0 0 chr2 43661070 43661093 -209595490 + AT_rich Low_complexity Low_complexity 1 23 0 908 124 0 0 chr2 43661101 43661238 -209595345 - AluSp/q SINE Alu -5 308 172 270 321 12 25 chr2 43661254 43661335 -209595248 - AluSc SINE Alu -82 217 138 208 108 46 15 chr2 43661339 43661404 -209595179 + (CGGGG)n Simple_repeat Simple_repeat 3 69 0 182 260 151 0 chr2 43663134 43663207 -209593376 - MIR SINE MIR -54 208 125 321 331 99 17 chr2 43663402 43663574 -209593009 - MIR SINE MIR -49 213 28 633 249 149 21 chr2 43663591 43663832 -209592751 - MLT1J LTR MaLR -3 508 237 793 189 0 0 chr2 43664171 43664303 -209592280 - FLAM_A SINE Alu -1 132 1 460 265 25 67 chr2 43666057 43666266 -209590317 + MIR SINE MIR 2 258 -4 393 181 8 120 chr2 43667360 43667493 -209589090 - MLT1H LTR MaLR 0 549 432 553 225 28 121 chr2 43667519 43667808 -209588775 - MLT1H LTR MaLR -259 290 29 403 295 51 0 chr2 43668445 43668601 -209587982 + Charlie8 DNA MER1_type 1 164 -2253 372 259 160 0 chr2 43668609 43668740 -209587843 + L1ME3A LINE L1 6002 6153 -17 5296 234 93 35 chr2 43669053 43670649 -209585934 + Charlie8 DNA MER1_type 422 2109 -308 180 111 0 0 chr2 43671017 43671044 -209585539 + (TG)n Simple_repeat Simple_repeat 2 28 0 396 0 0 0 chr2 43671578 43671622 -209584961 + (TC)n Simple_repeat Simple_repeat 1 44 0 575 233 143 5 chr2 43672098 43672287 -209584296 - MIR SINE MIR 0 262 48 219 266 21 32 chr2 43673168 43673262 -209583321 + GA-rich Low_complexity Low_complexity 3 95 0 230 61 0 0 chr2 43673650 43673683 -209582900 + LTR33A LTR ERVL 487 519 -4 2197 66 42 0 chr2 43673731 43674019 -209582564 + AluY SINE Alu 1 300 -11 193 186 23 0 chr2 43674180 43674223 -209582360 + MER5A DNA MER1_type 9 52 -137 204 421 13 0 chr2 43674375 43674527 -209582056 + L2 LINE L2 2898 3051 -221 673 237 30 0 chr2 43674675 43674810 -209581773 + MIR SINE MIR 47 185 -77 229 229 219 10 chr2 43674809 43674905 -209581678 - L2 LINE L2 -9 3304 3189 * 292 315 0 0 chr2 43675037 43675110 -209581473 + L2 LINE L2 3239 3311 -2 5275 44 0 5 chr2 43675525 43676160 -209580423 + L1PA7 LINE L1 5522 6153 -1 222 91 0 0 chr2 43676324 43676357 -209580226 + (T)n Simple_repeat Simple_repeat 1 33 0 438 220 46 9 chr2 43676515 43676624 -209579959 + MIR SINE MIR 66 178 -84 * 673 226 30 24 chr2 43676623 43676791 -209579792 + MIR SINE MIR 75 243 -19 1727 116 24 0 chr2 43677017 43677330 -209579253 + AluSx SINE Alu 26 344 0 234 283 100 82 chr2 43677440 43677905 -209578678 - L2 LINE L2 -129 3184 2699 334 239 37 18 chr2 43678062 43678171 -209578412 + L1MD3 LINE L1 7877 7987 -8 234 0 0 0 chr2 43678801 43678827 -209577756 + (A)n Simple_repeat Simple_repeat 1 26 0 327 104 0 0 chr2 43678829 43678877 -209577706 + (TA)n Simple_repeat Simple_repeat 1 48 0 901 234 7 78 chr2 43679135 43679157 -209577426 + MIR SINE MIR 13 35 -227 1827 144 0 26 chr2 43679157 43679462 -209577121 + AluSx SINE Alu 1 297 -15 901 234 7 78 chr2 43679462 43679708 -209576875 + MIR SINE MIR 35 262 0 741 304 57 26 chr2 43680443 43680792 -209575791 + L2 LINE L2 2280 2639 -675 392 339 86 11 chr2 43680867 43681041 -209575542 - MER5A DNA MER1_type -2 187 1 900 227 34 96 chr2 43681123 43681363 -209575220 - L2 LINE L2 -8 3305 3096 2562 100 3 22 chr2 43681363 43681732 -209574851 + THE1B LTR MaLR 1 362 -2 900 227 34 96 chr2 43681732 43681878 -209574705 - L2 LINE L2 -217 3096 2943 279 185 33 0 chr2 43682277 43682369 -209574214 + GA-rich Low_complexity Low_complexity 4 98 0 2147 109 0 10 chr2 43682479 43682783 -209573800 + AluSg SINE Alu 1 301 -9 477 329 18 0 chr2 43684542 43684709 -209571874 - MIR SINE MIR -3 259 90 372 261 21 56 chr2 43687224 43687366 -209569217 - L3b LINE CR1 -169 1414 1278 186 43 0 0 chr2 43687656 43687679 -209568904 + (GA)n Simple_repeat Simple_repeat 2 24 0 349 217 0 0 chr2 43687681 43687741 -209568842 - AluJo SINE Alu -20 282 223 1093 193 17 0 chr2 43687741 43687922 -209568661 - AluJo SINE Alu -128 184 1 417 301 52 30 chr2 43687922 43688111 -209568472 - MIR SINE MIR -56 206 14 224 235 12 37 chr2 43688904 43688985 -209567598 + GA-rich Low_complexity Low_complexity 3 81 0 749 268 38 17 chr2 43689605 43689844 -209566739 - MIR SINE MIR 0 262 19 631 162 61 95 chr2 43691142 43691226 -209565357 + AluSg/x SINE Alu 135 213 -97 222 37 0 0 chr2 43691226 43691253 -209565330 + (CGGGGG)n Simple_repeat Simple_repeat 1 27 0 631 162 61 95 chr2 43691253 43691316 -209565267 + AluSg/x SINE Alu 213 277 -33 357 24 0 0 chr2 43691316 43691358 -209565225 + (CA)n Simple_repeat Simple_repeat 1 42 0 560 346 106 49 chr2 43691360 43691681 -209564902 - L2 LINE L2 -132 3140 2839 4202 127 1 28 chr2 43691681 43691752 -209564831 - MER41B LTR ERV1 0 635 564 2671 26 0 3 chr2 43691752 43692055 -209564528 + AluYa5 SINE Alu 1 302 -9 4202 127 1 28 chr2 43692055 43692113 -209564470 - MER41B LTR ERV1 -71 564 506 2166 130 0 3 chr2 43692113 43692413 -209564170 + AluSx SINE Alu 1 299 -13 4202 127 1 28 chr2 43692413 43692934 -209563649 - MER41B LTR ERV1 -129 506 1 560 346 106 49 chr2 43692934 43693291 -209563292 - L2 LINE L2 -433 2839 2422 513 248 67 8 chr2 43693506 43693688 -209562895 - MIR SINE MIR -37 225 30 2385 76 0 23 chr2 43695052 43695356 -209561227 + AluY SINE Alu 1 297 -14 252 310 110 10 chr2 43695455 43695555 -209561028 + L3 LINE CR1 990 1099 -478 * 865 248 64 72 chr2 43695537 43695928 -209560655 - L2 LINE L2 -1 3312 2925 181 383 39 23 chr2 43695900 43696028 -209560555 + L3 LINE CR1 1067 1196 -381 * 1876 160 13 3 chr2 43696187 43696494 -209560089 - AluJo SINE Alu -2 310 1 355 217 94 51 chr2 43696781 43696919 -209559664 - L2 LINE L2 -12 3301 3158 726 239 0 38 chr2 43697085 43697244 -209559339 + FRAM SINE Alu 1 153 -13 1419 188 78 44 chr2 43697363 43697656 -209558927 - AluJo SINE Alu -9 303 1 2450 107 0 0 chr2 43698062 43698372 -209558211 + AluSx SINE Alu 1 310 -2 531 300 45 20 chr2 43699480 43699680 -209556903 + MIR SINE MIR 20 224 -38 229 250 56 14 chr2 43699929 43700001 -209556582 + MIR SINE MIR 114 188 -74 2290 106 23 0 chr2 43701815 43702118 -209554465 + AluSx SINE Alu 1 310 -2 1749 169 10 20 chr2 43702133 43702434 -209554149 + AluJb SINE Alu 12 309 -3 617 178 0 25 chr2 43702443 43702600 -209553983 + GA-rich Low_complexity Low_complexity 3 155 0 994 198 6 0 chr2 43706209 43706371 -209550212 - FRAM SINE Alu -1 165 3 283 336 45 37 chr2 43707402 43707536 -209549047 - L2 LINE L2 0 3313 3179 820 221 0 6 chr2 43707587 43707745 -209548838 - FRAM SINE Alu -19 157 1 2504 199 27 40 chr2 43707782 43708331 -209548252 + MLT1F LTR MaLR 1 542 0 463 246 168 17 chr2 43708331 43708510 -209548073 - MIR SINE MIR -52 210 5 318 338 28 0 chr2 43708607 43708752 -209547831 - L2 LINE L2 -213 3059 2911 189 107 0 0 chr2 43708973 43709001 -209547582 + (T)n Simple_repeat Simple_repeat 1 28 0 2576 81 0 0 chr2 43709003 43709312 -209547271 - AluSc SINE Alu 0 309 1 1060 303 53 58 chr2 43709448 43709562 -209547021 + L3 LINE CR1 346 459 -1118 455 122 27 0 chr2 43709562 43709636 -209546947 + MADE1 DNA Mariner 1 76 -4 1060 303 53 58 chr2 43709636 43710102 -209546481 + L3 LINE CR1 459 923 -654 455 276 21 60 chr2 43712041 43712212 -209544371 - MIR3 SINE MIR -59 149 9 254 231 12 53 chr2 43712724 43712893 -209543690 + (TTATA)n Simple_repeat Simple_repeat 2 163 0 335 192 49 127 chr2 43713828 43713927 -209542656 + MIR SINE MIR 92 197 -65 2268 100 7 0 chr2 43713927 43714218 -209542365 - AluSx SINE Alu -14 298 6 335 192 49 127 chr2 43714218 43714245 -209542338 + MIR SINE MIR 197 225 -37 1965 124 4 4 chr2 43714245 43714519 -209542064 - AluSx SINE Alu -38 274 1 335 192 49 127 chr2 43714519 43714587 -209541996 + MIR SINE MIR 225 262 0 308 220 33 11 chr2 43715381 43715472 -209541111 + (TTCA)n Simple_repeat Simple_repeat 1 93 0 34 0 0 0 chr2 43715808 43715842 -209540741 + AT_rich Low_complexity Low_complexity 1 34 0 1047 227 144 49 chr2 43715984 43716392 -209540191 + L2 LINE L2 2622 3110 -203 306 106 0 0 chr2 43716392 43716439 -209540144 + (CA)n Simple_repeat Simple_repeat 1 47 0 1047 227 144 49 chr2 43716439 43716665 -209539918 + L2 LINE L2 3110 3313 0 204 197 0 66 chr2 43718047 43718108 -209538475 + CT-rich Low_complexity Low_complexity 5 61 0 481 328 91 0 chr2 43718119 43718305 -209538278 + MIR SINE MIR 20 222 -40 215 231 0 0 chr2 43718371 43718410 -209538173 + (CA)n Simple_repeat Simple_repeat 2 40 0 1758 195 44 16 chr2 43719329 43719693 -209536890 + MLT1A2 LTR MaLR 1 374 0 1016 231 41 16 chr2 43719995 43720237 -209536346 - MIR SINE MIR -3 259 12 511 187 57 32 chr2 43721389 43721512 -209535071 - MIR SINE MIR -58 204 79 664 261 90 18 chr2 43721518 43721887 -209534696 + MLT1J2 LTR MaLR 5 425 -25 646 222 254 1 chr2 43722436 43722708 -209533875 + L1MC4a LINE L1 5585 5758 -406 22 0 0 0 chr2 43722907 43722929 -209533654 + AT_rich Low_complexity Low_complexity 1 22 0 544 191 21 28 chr2 43724288 43724429 -209532154 - MER103 DNA DNA -7 159 20 459 0 0 0 chr2 43724513 43724564 -209532019 + (TG)n Simple_repeat Simple_repeat 2 52 0 944 142 62 31 chr2 43724951 43725113 -209531470 + MER5A DNA MER1_type 1 167 -22 805 261 139 13 chr2 43725278 43725588 -209530995 + L2 LINE L2 2963 3311 -2 200 156 22 22 chr2 43728373 43728418 -209528165 + GA-rich Low_complexity Low_complexity 1 45 0 2335 103 0 23 chr2 43731253 43731563 -209525020 - AluSg SINE Alu -6 304 2 620 229 0 0 chr2 43731565 43731687 -209524896 - MIR SINE MIR -69 193 72 258 269 151 84 chr2 43731688 43731807 -209524776 + L2 LINE L2 3137 3263 -9 2227 126 0 0 chr2 43731811 43732113 -209524470 - AluSq SINE Alu -11 302 1 254 277 0 0 chr2 43732286 43732351 -209524232 + MIR SINE MIR 102 166 -96 196 343 30 0 chr2 43732420 43732487 -209524096 + MIR SINE MIR 163 231 -31 1675 233 106 33 chr2 43732647 43733192 -209523391 - MLT1G1 LTR MaLR 0 595 11 340 318 0 40 chr2 43733192 43733318 -209523265 - MIR SINE MIR -72 136 16 499 306 29 87 chr2 43734261 43734362 -209522221 + MIR SINE MIR 29 134 -128 2575 51 0 0 chr2 43734362 43734655 -209521928 + AluY SINE Alu 2 294 -17 499 306 29 87 chr2 43734655 43734795 -209521788 + MIR SINE MIR 134 256 -6 722 25 0 0 chr2 43735220 43735301 -209521282 + AluY SINE Alu 79 159 -152 332 290 90 0 chr2 43736976 43737076 -209519507 + L1MC4 LINE L1 6613 6721 -1321 772 290 97 40 chr2 43737097 43737542 -209519041 - L1MC4a LINE L1 -1904 5904 5435 914 149 0 14 chr2 43737543 43737691 -209518892 + AluSq/x SINE Alu 2 147 -165 1330 173 0 0 chr2 43737691 43737911 -209518672 + AluSg/x SINE Alu 85 304 -8 201 245 19 19 chr2 43738004 43738057 -209518526 - MER5B DNA MER1_type -42 136 84 2318 228 50 87 chr2 43738081 43738469 -209518114 + L1ME3 LINE L1 5057 5458 -704 974 214 48 29 chr2 43738469 43738675 -209517908 + MER63A DNA MER1_type 1 210 0 2318 228 50 87 chr2 43738675 43738887 -209517696 + L1ME3 LINE L1 5458 5676 -486 1845 215 92 29 chr2 43738887 43739307 -209517276 + MLT2B1 LTR ERVL 1 393 -127 348 83 0 0 chr2 43739307 43739355 -209517228 + (TA)n Simple_repeat Simple_repeat 2 49 0 1845 215 92 29 chr2 43739355 43739382 -209517201 + MLT2B1 LTR ERVL 393 417 -103 557 52 13 0 chr2 43739382 43739459 -209517124 + (TAGA)n Simple_repeat Simple_repeat 4 81 0 1845 215 92 29 chr2 43739459 43739498 -209517085 + MLT2B1 LTR ERVL 417 519 -1 2318 228 50 87 chr2 43739498 43740004 -209516579 + L1ME3 LINE L1 5676 6135 -27 1492 147 0 106 chr2 43740037 43740377 -209516206 - AluJo SINE Alu -8 304 1 21 57 0 0 chr2 43740381 43740416 -209516167 + AT_rich Low_complexity Low_complexity 1 35 0 391 365 17 59 chr2 43740604 43740894 -209515689 - L2 LINE L2 0 3272 2995 2256 143 13 19 chr2 43740926 43741303 -209515280 - THE1C LTR MaLR 0 375 1 402 286 50 8 chr2 43741675 43741794 -209514789 + L2 LINE L2 3149 3272 0 2265 78 14 0 chr2 43741955 43742248 -209514335 - AluSc SINE Alu -11 298 2 358 239 70 148 chr2 43742518 43742802 -209513781 + MIR SINE MIR 1 262 0 2693 168 77 46 chr2 43743286 43743633 -209512950 - MER69 DNA AcHobo -4 2522 2187 2156 114 0 0 chr2 43743633 43743932 -209512651 + AluSq SINE Alu 1 299 -14 633 27 0 0 chr2 43743932 43744007 -209512576 + (GGAA)n Simple_repeat Simple_repeat 2 76 0 2693 168 77 46 chr2 43744007 43744347 -209512236 - MER69 DNA AcHobo -338 2188 1813 759 241 147 8 chr2 43744348 43744614 -209511969 - MER69 DNA AcHobo -389 837 535 1316 267 67 23 chr2 43744619 43745054 -209511529 + MLT1C LTR MaLR 6 459 -8 1592 241 61 48 chr2 43745067 43745453 -209511130 - MER69 DNA AcHobo -688 538 159 1916 115 32 0 chr2 43745453 43745731 -209510852 + AluSx SINE Alu 1 287 -25 666 62 0 0 chr2 43745731 43745827 -209510756 + (TA)n Simple_repeat Simple_repeat 2 97 0 1592 241 61 48 chr2 43745827 43745961 -209510622 - MER69 DNA AcHobo -1066 160 10 224 349 153 21 chr2 43746399 43746588 -209509995 + L3 LINE CR1 55 268 -1309 327 49 0 0 chr2 43746588 43746629 -209509954 + (TG)n Simple_repeat Simple_repeat 2 42 0 566 253 27 40 chr2 43746743 43746912 -209509671 - MIR3 SINE MIR -54 154 7 288 365 81 19 chr2 43747229 43747440 -209509143 + L3 LINE CR1 248 471 -1106 303 250 50 60 chr2 43747496 43747517 -209509066 + L3 LINE CR1 618 638 -939 2422 57 0 3 chr2 43747517 43747818 -209508765 - AluY SINE Alu -11 300 1 303 250 50 60 chr2 43747818 43747896 -209508687 + L3 LINE CR1 638 716 -861 224 307 105 55 chr2 43748039 43748416 -209508167 - L2 LINE L2 -154 3118 2728 525 327 110 32 chr2 43748518 43748864 -209507719 + L2 LINE L2 2836 3208 -64 239 95 48 0 chr2 43748894 43748936 -209507647 + GA-rich Low_complexity Low_complexity 4 47 0 1596 262 70 19 chr2 43748943 43749470 -209507113 - MLT1H1 LTR MaLR -1 554 1 1047 253 4 16 chr2 43749690 43749935 -209506648 + MIR SINE MIR 19 260 -2 303 267 56 0 chr2 43750304 43750394 -209506189 - L2 LINE L2 -6 3266 3172 2553 108 16 3 chr2 43751189 43751559 -209505024 - THE1C LTR MaLR 0 375 1 216 269 58 0 chr2 43751620 43751724 -209504859 + (CCCTAA)n Simple_repeat Simple_repeat 2 111 0 314 274 98 0 chr2 43753083 43753185 -209503398 - L2 LINE L2 -5 3267 3156 400 201 16 63 chr2 43753259 43753448 -209503135 + (CA)n Simple_repeat Simple_repeat 1 180 0 365 193 12 36 chr2 43753629 43753712 -209502871 + L2 LINE L2 3192 3272 0 291 237 41 31 chr2 43753930 43754027 -209502556 + LTR16B LTR ERVL 319 416 -48 469 118 11 21 chr2 43754268 43754361 -209502222 + (GGGGA)n Simple_repeat Simple_repeat 2 93 0 456 255 0 22 chr2 43754869 43755053 -209501530 + G-rich Low_complexity Low_complexity 1 180 0 184 300 0 0 chr2 43756905 43756945 -209499638 + MIR SINE MIR 40 79 -129 931 265 26 0 chr2 43756958 43757188 -209499395 + MIR SINE MIR 21 256 -6 182 345 84 8 chr2 43757321 43757440 -209499143 + L2 LINE L2 2724 2851 -463 5959 33 83 13 chr2 43757795 43758985 -209497598 + SVA Other Other 1 1383 -3 192 271 42 0 chr2 43759048 43759096 -209497487 + L2 LINE L2 3261 3310 -3 261 289 36 0 chr2 43760582 43760665 -209495918 + L2 LINE L2 3187 3272 0 27 29 0 0 chr2 43762289 43762323 -209494260 + AT_rich Low_complexity Low_complexity 1 34 0 473 224 247 11 chr2 43763174 43763348 -209493235 - MIR SINE MIR -11 251 37 202 320 13 0 chr2 43763663 43763741 -209492842 + (CA)n Simple_repeat Simple_repeat 1 79 0 1114 234 115 50 chr2 43765353 43765598 -209490985 + MLT1F1 LTR MaLR 123 408 -159 2225 71 0 7 chr2 43765598 43765893 -209490690 + AluSc SINE Alu 1 293 -16 1114 234 115 50 chr2 43765893 43766065 -209490518 + MLT1F1 LTR MaLR 408 567 0 932 221 152 64 chr2 43766220 43766595 -209489988 + L2 LINE L2 2875 3282 -31 1813 143 78 21 chr2 43766601 43766874 -209489709 - MLT1A1 LTR MaLR -2 363 66 3462 115 8 2 chr2 43766874 43767368 -209489215 - LOR1a LTR ERV1 0 497 1 1813 143 78 21 chr2 43767368 43767429 -209489154 - MLT1A1 LTR MaLR -299 66 10 441 0 0 0 chr2 43767541 43767590 -209488993 + (TG)n Simple_repeat Simple_repeat 2 50 0 1833 78 0 4 chr2 43767590 43767832 -209488751 - AluSq SINE Alu -28 285 45 306 298 121 8 chr2 43767897 43768021 -209488562 - MIR SINE MIR -75 187 50 449 316 0 32 chr2 43768078 43768233 -209488350 - MIR SINE MIR -50 212 63 219 224 0 35 chr2 43768237 43768295 -209488288 - L2 LINE L2 -1 3271 3216 347 283 62 118 chr2 43768569 43768876 -209487707 - L1MB5 LINE L1 -136 6030 5743 597 285 55 15 chr2 43768930 43769210 -209487373 - L1MB5 LINE L1 -619 5547 5328 1007 225 73 45 chr2 43769466 43769981 -209486602 + L1MC4 LINE L1 5125 5375 -787 278 174 0 0 chr2 43769981 43770027 -209486556 + Alu SINE Alu 244 289 -12 1007 225 73 45 chr2 43770027 43770160 -209486423 + L1MC4 LINE L1 5375 5503 -659 542 238 65 0 chr2 43770142 43770379 -209486204 + L1ME3A LINE L1 5887 6170 0 * 2181 98 0 19 chr2 43770640 43770956 -209485627 + AluSx SINE Alu 1 310 -2 328 306 60 15 chr2 43770979 43771113 -209485470 - MIR3 SINE MIR -68 140 1 1809 126 68 0 chr2 43772438 43772716 -209483867 - AluSg SINE Alu -13 297 1 518 254 16 8 chr2 43772752 43772878 -209483705 + AluJb SINE Alu 183 309 -3 794 251 81 9 chr2 43772963 43773174 -209483409 - MIR SINE MIR -17 245 20 2217 98 0 0 chr2 43773977 43774282 -209482301 - AluSq SINE Alu -8 305 1 323 264 251 18 chr2 43774761 43774928 -209481655 + MIR SINE MIR 2 207 -55 274 296 49 0 chr2 43775026 43775107 -209481476 - MIR SINE MIR -79 129 45 950 223 65 140 chr2 43775512 43775828 -209480755 - L1ME3A LINE L1 -9 6161 5823 441 111 0 0 chr2 43775828 43775891 -209480692 + L1PA8 LINE L1 6097 6159 -13 950 223 65 140 chr2 43775891 43775916 -209480667 - L1ME3A LINE L1 -347 5823 5798 936 80 5 43 chr2 43775916 43776103 -209480480 + (TA)n Simple_repeat Simple_repeat 1 180 0 950 223 65 140 chr2 43776103 43776226 -209480357 - L1ME3A LINE L1 -372 5798 5729 924 161 0 38 chr2 43776304 43776490 -209480093 + AluJb SINE Alu 123 301 -11 6588 43 2 6 chr2 43776521 43777319 -209479264 - SVA Other Other 0 1386 592 656 64 6 76 chr2 43777339 43777511 -209479072 - SVA Other Other -592 794 635 594 127 9 96 chr2 43777696 43777916 -209478667 - SVA Other Other -520 866 666 5555 78 28 16 chr2 43777932 43778781 -209477802 - SVA Other Other -520 866 8 2024 141 30 43 chr2 43778947 43779160 -209477423 - MLT1A1 LTR MaLR 0 365 158 2092 112 10 13 chr2 43779160 43779472 -209477111 - AluSx SINE Alu -1 311 1 2024 141 30 43 chr2 43779472 43779627 -209476956 - MLT1A1 LTR MaLR -207 158 2 5473 51 0 31 chr2 43779852 43779985 -209476598 + L1PA7 LINE L1 5366 5502 -652 2217 103 0 0 chr2 43779985 43780276 -209476307 + AluSc SINE Alu 2 292 -17 5473 51 0 31 chr2 43780276 43780850 -209475733 + L1PA7 LINE L1 5502 6051 -103 673 225 107 1 chr2 43781001 43781241 -209475342 + L1MC4a LINE L1 5619 5762 -402 2005 135 10 0 chr2 43781246 43781543 -209475040 + AluSx SINE Alu 1 300 -12 321 248 8 16 chr2 43782573 43782694 -209473889 + CT-rich Low_complexity Low_complexity 1 120 0 1263 207 89 26 chr2 43782696 43782966 -209473617 - AluJo SINE Alu -13 289 3 474 271 52 7 chr2 43782971 43783126 -209473457 - L1ME3A LINE L1 -463 5658 5497 2028 110 7 10 chr2 43785793 43786085 -209470498 - AluSx SINE Alu -21 291 1 1938 159 0 14 chr2 43787246 43787541 -209469042 + AluJb SINE Alu 1 291 -21 303 331 84 30 chr2 43787894 43788060 -209468523 + HAL1 LINE L1 473 647 -1860 291 232 131 10 chr2 43788280 43788379 -209468204 + HAL1 LINE L1 777 887 -1620 412 259 59 84 chr2 43788384 43788623 -209467960 + HAL1 LINE L1 2244 2476 -31 314 311 84 99 chr2 43788932 43789266 -209467317 - L2 LINE L2 -16 3297 2974 1699 162 13 54 chr2 43789266 43789581 -209467002 + AluJo SINE Alu 1 302 -10 314 311 84 99 chr2 43789581 43789853 -209466730 - L2 LINE L2 -339 2974 2699 261 303 182 0 chr2 43789986 43790085 -209466498 - L2 LINE L2 0 3313 3197 490 233 110 76 chr2 43790297 43790546 -209466037 + MLT1H LTR MaLR 32 302 -228 273 210 0 16 chr2 43790627 43790689 -209465894 + MLT1H LTR MaLR 489 549 0 24 0 0 0 chr2 43791433 43791457 -209465126 + AT_rich Low_complexity Low_complexity 1 24 0 215 0 67 0 chr2 43791742 43791772 -209464811 + (CACAA)n Simple_repeat Simple_repeat 3 34 0 249 245 0 0 chr2 43792467 43792516 -209464067 + G-rich Low_complexity Low_complexity 1 49 0 417 216 85 68 chr2 43792762 43792938 -209463645 + MLT1J2 LTR MaLR 59 237 -213 280 245 47 28 chr2 43792979 43793085 -209463498 + MLT1J1 LTR MaLR 339 446 0 228 359 41 28 chr2 43793219 43793290 -209463293 - L2 LINE L2 -18 3295 3226 444 203 30 117 chr2 43793290 43793487 -209463096 - MER104 DNA MER2_type 0 180 1 228 359 41 28 chr2 43793487 43793560 -209463023 - L2 LINE L2 -87 3226 3149 1137 199 165 16 chr2 43794727 43794867 -209461716 + MLT1A2 LTR MaLR 5 123 -251 180 0 0 0 chr2 43794867 43794887 -209461696 + (TCCC)n Simple_repeat Simple_repeat 1 20 0 1137 199 165 16 chr2 43794887 43795068 -209461515 + MLT1A2 LTR MaLR 123 374 0 289 122 20 0 chr2 43795135 43795184 -209461399 + L2 LINE L2 3264 3313 0 1885 171 0 7 chr2 43795307 43795599 -209460984 + AluJb SINE Alu 1 290 -22 325 310 113 7 chr2 43796336 43796742 -209459841 - L1M4 LINE L1 -812 5334 4886 1999 118 86 9 chr2 43799091 43799439 -209457144 + THE1C LTR MaLR 1 375 0 1433 243 128 16 chr2 43799638 43800090 -209456493 + MLT1J LTR MaLR 1 503 -8 670 221 146 0 chr2 43800280 43800438 -209456145 + MER5A DNA MER1_type 9 189 0 691 205 0 0 chr2 43800745 43800857 -209455726 + FLAM_A SINE Alu 5 116 -17 317 280 108 25 chr2 43800935 43801092 -209455491 + L1MEd LINE L1 653 822 -5297 804 235 163 89 chr2 43801327 43801791 -209454792 - MLT1F LTR MaLR -1 541 80 2035 125 7 4 chr2 43801791 43802247 -209454336 - AluJb SINE Alu 0 457 1 804 235 163 89 chr2 43802247 43802334 -209454249 - MLT1F LTR MaLR -462 80 1 835 233 11 0 chr2 43802349 43802525 -209454058 + MER45A DNA AcHobo 1 178 0 1184 276 60 21 chr2 43803620 43804087 -209452496 + LTR33A LTR ERVL 1 485 -38 539 309 68 4 chr2 43805915 43806151 -209450432 - MIR SINE MIR 0 262 12 2329 76 28 3 chr2 43806613 43806903 -209449680 - AluY SINE Alu -14 297 1 2332 89 0 0 chr2 43806916 43807256 -209449327 - AluY SINE Alu 0 340 1 2147 108 39 0 chr2 43807258 43807544 -209449039 - AluSx SINE Alu -15 297 1 2126 160 8 0 chr2 43807701 43808064 -209448519 - MER47A DNA MER2_type 0 366 1 350 253 7 84 chr2 43810459 43810613 -209445970 + Charlie8 DNA MER1_type 1 142 -2275 2393 99 3 13 chr2 43810912 43811224 -209445359 + AluSq SINE Alu 1 309 -4 7202 34 1 1 chr2 43811271 43812543 -209444040 + L1PA5 LINE L1 4873 6145 -9 2088 107 50 10 chr2 43812659 43812958 -209443625 - AluSx SINE Alu -1 311 1 314 362 87 0 chr2 43813019 43813168 -209443415 - L1MC/D LINE L1 -2031 5777 5616 2293 96 7 0 chr2 43814810 43815112 -209441471 - AluSq SINE Alu -9 304 1 927 217 8 41 chr2 43815300 43815544 -209441039 - MER106A DNA MER1_type 0 236 1 334 274 9 28 chr2 43815729 43815835 -209440748 + LTR33 LTR ERVL 96 199 -322 211 274 0 0 chr2 43816640 43816691 -209439892 + MIR SINE MIR 157 207 -55 364 312 101 25 chr2 43817190 43817427 -209439156 - MIR SINE MIR -6 256 2 203 311 14 0 chr2 43817941 43818015 -209438568 - L3b LINE CR1 -169 1414 1340 28 61 0 0 chr2 43819668 43819717 -209436866 + AT_rich Low_complexity Low_complexity 1 49 0 450 283 7 22 chr2 43821319 43821388 -209435195 - MER5A DNA MER1_type -6 183 115 987 177 12 0 chr2 43821388 43821552 -209435031 - FRAM SINE Alu 0 166 1 450 283 7 22 chr2 43821552 43821620 -209434963 - MER5A DNA MER1_type -74 115 48 525 298 48 16 chr2 43822337 43822525 -209434058 - MIR SINE MIR -10 252 59 614 272 49 36 chr2 43825170 43825394 -209431189 - MIR SINE MIR -17 245 19 2239 109 30 0 chr2 43825398 43825700 -209430883 - AluSx SINE Alu -1 311 1 227 226 18 65 chr2 43829576 43829744 -209426839 + (CCGGG)n Simple_repeat Simple_repeat 1 160 0 25 51 0 0 chr2 43829804 43829843 -209426740 + GC_rich Low_complexity Low_complexity 1 39 0 50 102 0 0 chr2 43829947 43830123 -209426460 + GC_rich Low_complexity Low_complexity 1 176 0 393 75 0 0 chr2 43831375 43831428 -209425155 + (TG)n Simple_repeat Simple_repeat 2 54 0 429 236 126 16 chr2 43831587 43831714 -209424869 - MLT1E LTR MaLR -448 145 5 207 258 0 16 chr2 43831734 43831796 -209424787 + L2 LINE L2 3210 3270 -2 3238 70 15 4 chr2 43833072 43833530 -209423053 + L1PA8 LINE L1 5710 6172 0 337 286 85 80 chr2 43833548 43833772 -209422811 + MIR SINE MIR 20 244 -18 861 186 12 0 chr2 43837909 43838081 -209418502 + MER5B DNA MER1_type 5 178 0 348 159 11 91 chr2 43838098 43838186 -209418397 + MER5A DNA MER1_type 10 90 -99 931 153 33 7 chr2 43838244 43838394 -209418189 + MER5B DNA MER1_type 5 158 -20 694 218 115 2 chr2 43838397 43838559 -209418024 - MER5B DNA MER1_type -5 173 7 777 159 80 23 chr2 43839044 43839220 -209417363 + MER53 DNA DNA 4 189 0 2145 101 0 3 chr2 43839386 43839682 -209416901 - AluSx SINE Alu -17 295 1 560 111 89 0 chr2 43840292 43840382 -209416201 + MER4A LTR ERV1 1 98 -566 1976 138 8 45 chr2 43840382 43840737 -209415846 + MER4A LTR ERV1 261 664 0 438 20 0 0 chr2 43842683 43842734 -209413849 + (TG)n Simple_repeat Simple_repeat 2 52 0 2657 92 19 3 chr2 43843033 43843402 -209413181 + THE1C LTR MaLR 1 375 0 726 307 54 4 chr2 43843419 43843660 -209412923 + MIR SINE MIR 10 262 0 1677 111 6 105 chr2 43844723 43845048 -209411535 - AluJb SINE Alu -19 293 1 3842 144 45 30 chr2 43845299 43845992 -209410591 - MER39 LTR ERV1 -4 703 1 530 256 121 10 chr2 43846066 43846265 -209410318 - MIR SINE MIR -38 224 4 322 268 63 42 chr2 43846693 43846835 -209409748 + Charlie8 DNA MER1_type 46 190 -2227 8750 241 101 36 chr2 43848053 43850545 -209406038 + L2 LINE L2 16 2345 -968 1677 170 0 23 chr2 43850545 43850851 -209405732 + AluJb SINE Alu 1 299 -13 8750 241 101 36 chr2 43850851 43850962 -209405621 + L2 LINE L2 2345 2447 -866 1290 167 152 11 chr2 43850962 43851226 -209405357 + AluJb SINE Alu 1 301 -1 8750 241 101 36 chr2 43851226 43851727 -209404856 + L2 LINE L2 2447 3312 -1 180 77 0 0 chr2 43851900 43851926 -209404657 + (GA)n Simple_repeat Simple_repeat 1 26 0 2063 98 0 0 chr2 43853068 43853344 -209403239 + AluSg SINE Alu 5 280 -30 303 122 0 0 chr2 43853349 43853398 -209403185 + (TG)n Simple_repeat Simple_repeat 2 50 0 225 244 47 0 chr2 43853398 43853484 -209403099 - L1MC4 LINE L1 -1339 6703 6614 * 228 233 47 0 chr2 43853414 43853500 -209403083 + L1MC4 LINE L1 6614 6703 -1339 431 184 0 10 chr2 43853658 43853756 -209402827 + (CA)n Simple_repeat Simple_repeat 1 97 0 673 231 84 48 chr2 43854389 43854611 -209401972 - L1ME4a LINE L1 -2 6119 5880 2202 107 0 19 chr2 43854611 43854929 -209401654 + AluSx SINE Alu 1 312 0 673 231 84 48 chr2 43854929 43855039 -209401544 - L1ME4a LINE L1 -241 5880 5775 2062 142 0 0 chr2 43855903 43856214 -209400369 + AluSx SINE Alu 1 311 -1 860 209 0 0 chr2 43856222 43856385 -209400198 + AluJb SINE Alu 137 299 -13 197 268 211 14 chr2 43856571 43856713 -209399870 - L2 LINE L2 -272 3000 2831 254 185 37 102 chr2 43856883 43856991 -209399592 + MER103 DNA DNA 65 165 -1 201 294 29 0 chr2 43857484 43857552 -209399031 + T-rich Low_complexity Low_complexity 5 74 0 1604 158 36 26 chr2 43857554 43857857 -209398726 - AluJo SINE Alu -2 310 5 615 220 254 6 chr2 43858292 43858469 -209398114 + MIR SINE MIR 2 222 -40 220 301 257 29 chr2 43860184 43860320 -209396263 + MER5A DNA MER1_type 16 182 -7 296 157 59 0 chr2 43860952 43861003 -209395580 + MER5B DNA MER1_type 1 54 -124 517 193 18 0 chr2 43861004 43861118 -209395465 - L1MA10 LINE L1 -7 6327 6212 1068 62 0 0 chr2 43861145 43861274 -209395309 - AluSq/x SINE Alu -183 130 2 4695 201 73 64 chr2 43861275 43862467 -209394116 - L1M4 LINE L1 -1009 5137 3958 1795 146 0 0 chr2 43862467 43862734 -209393849 + AluSx SINE Alu 1 267 -45 1017 113 0 0 chr2 43862737 43862896 -209393687 + (GAAA)n Simple_repeat Simple_repeat 4 162 0 4695 201 73 64 chr2 43862896 43863170 -209393413 - L1M4 LINE L1 -2189 3957 3653 2179 108 3 10 chr2 43863222 43863536 -209393047 - AluSq SINE Alu 0 313 2 2120 84 28 3 chr2 43863545 43863831 -209392752 - AluSx SINE Alu -19 293 1 2389 87 3 0 chr2 43863896 43864208 -209392375 - AluSp SINE Alu 0 313 1 23 0 0 0 chr2 43864962 43864985 -209391598 + AT_rich Low_complexity Low_complexity 1 23 0 472 277 85 67 chr2 43865366 43865673 -209390910 - L1ME4a LINE L1 -70 6051 5732 2078 104 3 0 chr2 43865673 43865960 -209390623 - AluSc SINE Alu -6 303 16 472 277 85 67 chr2 43865960 43866099 -209390484 - L1ME4a LINE L1 -389 5732 5597 2032 127 0 0 chr2 43866176 43866500 -209390083 + AluSx SINE Alu 1 312 0 484 193 25 134 chr2 43867630 43867868 -209388715 - L1MC5 LINE L1 -48 7913 7702 2173 104 3 3 chr2 43867868 43868175 -209388408 - AluSq SINE Alu -6 307 1 658 265 217 36 chr2 43869302 43869611 -209386972 + L2 LINE L2 2947 3311 -2 2048 156 169 14 chr2 43870685 43871122 -209385461 + MLT1D LTR MaLR 1 505 0 348 238 12 12 chr2 43871143 43871223 -209385360 - L2 LINE L2 -47 3266 3187 219 88 0 0 chr2 43871509 43871543 -209385040 + (TC)n Simple_repeat Simple_repeat 1 34 0 2240 59 38 0 chr2 43871767 43872056 -209384527 - AluSp SINE Alu -11 302 3 625 260 77 16 chr2 43872548 43872794 -209383789 - MIR SINE MIR 0 262 2 310 286 79 29 chr2 43874965 43875105 -209381478 - MIR SINE MIR -39 223 77 24 0 0 0 chr2 43875477 43875501 -209381082 + GC_rich Low_complexity Low_complexity 1 24 0 252 326 53 63 chr2 43876435 43876625 -209379958 + L2 LINE L2 2994 3181 -91 2218 150 81 8 chr2 43876656 43877049 -209379534 - MSTA LTR MaLR 0 428 7 201 304 36 0 chr2 43877053 43877109 -209379474 + L2 LINE L2 3254 3311 -2 265 188 14 29 chr2 43878234 43878303 -209378280 + GA-rich Low_complexity Low_complexity 4 71 0 2050 121 0 7 chr2 43878549 43878855 -209377728 - AluSx SINE Alu -8 304 1 353 331 77 60 chr2 43878861 43879275 -209377308 - L2 LINE L2 -18 3254 2834 1939 134 3 0 chr2 43879949 43880241 -209376342 - AluJb SINE Alu -19 293 1 181 338 70 0 chr2 43880596 43880667 -209375916 - L2 LINE L2 -4 3309 3234 1891 149 13 7 chr2 43881058 43881367 -209375216 - AluJb SINE Alu -1 311 1 2055 105 0 7 chr2 43881392 43881701 -209374882 + AluSx SINE Alu 1 307 0 404 281 20 127 chr2 43881702 43881994 -209374589 + L2 LINE L2 3010 3270 -2 266 158 0 0 chr2 43882554 43882592 -209373991 + MLT1L LTR MaLR 360 397 -218 339 200 76 57 chr2 43882634 43882739 -209373844 + MLT1J LTR MaLR 404 510 -1 533 272 36 93 chr2 43882833 43883040 -209373543 + L2 LINE L2 2544 2732 -582 2073 114 3 7 chr2 43883040 43883338 -209373245 - AluSq SINE Alu -16 297 1 533 272 36 93 chr2 43883338 43883409 -209373174 + L2 LINE L2 2732 2806 -508 676 271 6 18 chr2 43883425 43883595 -209372988 - MER5B DNA MER1_type -2 176 9 640 320 119 36 chr2 43883600 43884038 -209372545 + L2 LINE L2 2809 3282 -31 994 169 12 12 chr2 43884040 43884212 -209372371 - LTR40b LTR ERVL 0 462 291 1286 232 25 4 chr2 43884285 43884583 -209372000 - LTR40a LTR ERVL -203 297 14 567 299 24 64 chr2 43884583 43884958 -209371625 + L1MEc LINE L1 200 559 -5837 1661 177 32 64 chr2 43885015 43885388 -209371195 - MLT1A1 LTR MaLR 0 365 5 1047 146 30 90 chr2 43885453 43885686 -209370897 - MER20 DNA MER1_type 0 219 1 781 250 33 29 chr2 43885767 43886007 -209370576 - L1MCc LINE L1 -6159 264 24 483 279 149 26 chr2 43887423 43887591 -209368992 - L1ME4a LINE L1 -101 6020 5874 2121 111 0 3 chr2 43887591 43887889 -209368694 - AluSx SINE Alu -15 297 1 483 279 149 26 chr2 43887889 43888176 -209368407 - L1ME4a LINE L1 -247 5874 5509 1510 154 14 134 chr2 43888268 43888618 -209367965 - AluYb8 SINE Alu 0 308 1 945 224 128 17 chr2 43888620 43888984 -209367599 + MER57A LTR ERV1 31 403 0 478 248 86 0 chr2 43889356 43889473 -209367110 + L2 LINE L2 3186 3312 -1 323 223 30 176 chr2 43890331 43890564 -209366019 - L2 LINE L2 0 3313 3115 213 361 12 0 chr2 43890943 43891026 -209365557 + L2 LINE L2 3187 3270 -2 1870 143 7 4 chr2 43891468 43891748 -209364835 - AluSx SINE Alu -5 307 27 423 262 95 0 chr2 43891858 43892016 -209364567 - MIR3 SINE MIR -14 194 20 658 323 77 53 chr2 43892706 43893161 -209363422 + MLT1K LTR MaLR 2 467 -121 632 253 54 7 chr2 43894080 43894357 -209362226 + L1M4 LINE L1 5102 5391 -755 584 293 9 47 chr2 43894371 43894586 -209361997 - MIR SINE MIR -51 211 5 1184 153 186 5 chr2 43894595 43894810 -209361773 + AluJo SINE Alu 1 254 -58 1214 223 89 6 chr2 43945550 43945864 -209310719 + MER58B DNA MER1_type 2 341 0 339 333 104 28 chr2 43946010 43946259 -209310324 - L2 LINE L2 -468 2846 2579 1561 173 40 106 chr2 43947184 43947444 -209309139 - L1ME1 LINE L1 -5 6161 5950 1746 172 3 18 chr2 43947444 43947729 -209308854 - AluJo SINE Alu -30 282 2 1561 173 40 106 chr2 43947729 43947987 -209308596 - L1ME1 LINE L1 -216 5950 5677 256 228 0 0 chr2 43947985 43948042 -209308541 - L1MB5 LINE L1 -180 5994 5938 * 1642 217 58 51 chr2 43948076 43948624 -209307959 - L1MB5 LINE L1 -855 5291 4740 24 32 0 0 chr2 43948631 43948662 -209307921 + AT_rich Low_complexity Low_complexity 1 31 0 1334 126 9 14 chr2 43948689 43948903 -209307680 - AluJb SINE Alu -97 215 3 227 118 0 0 chr2 43948937 43948971 -209307612 - Alu SINE Alu -11 290 257 469 162 0 0 chr2 43949073 43949147 -209307436 - AluS SINE Alu -238 74 1 524 133 0 0 chr2 43949169 43949244 -209307339 + AluJo SINE Alu 1 75 -237 843 119 0 24 chr2 43949352 43949478 -209307105 - FLAM_C SINE Alu -10 133 11 1091 218 0 5 chr2 43949692 43949908 -209306675 + AluJo SINE Alu 75 289 -23 324 251 134 53 chr2 43949942 43950113 -209306470 - MIR SINE MIR -75 187 3 21 0 0 0 chr2 43950182 43950203 -209306380 + AT_rich Low_complexity Low_complexity 1 21 0 571 306 90 5 chr2 43950622 43950844 -209305739 - L2 LINE L2 -681 2633 2393 1175 205 31 4 chr2 43951063 43951321 -209305262 - MER58 DNA MER1_type -2155 265 1 251 279 115 33 chr2 43951588 43951710 -209304873 - MLT1K LTR MaLR -146 442 311 25 31 0 0 chr2 43951966 43951998 -209304585 + AT_rich Low_complexity Low_complexity 1 32 0 577 56 0 0 chr2 43952100 43952171 -209304412 + AluS SINE Alu 2 72 -241 633 108 43 0 chr2 43952183 43952276 -209304307 + AluS SINE Alu 1 97 -216 984 30 8 15 chr2 43952376 43952507 -209304076 + L1PA4 LINE L1 6026 6155 0 26 50 0 0 chr2 43952971 43953011 -209303572 + AT_rich Low_complexity Low_complexity 1 40 0 577 212 30 38 chr2 43953422 43953554 -209303029 + L2 LINE L2 3175 3305 -8 931 179 6 6 chr2 43953596 43953758 -209302825 - AluSg/x SINE Alu -42 268 107 1172 188 15 55 chr2 43953769 43954040 -209302543 + MLT1B LTR MaLR 129 388 -2 1386 12 0 0 chr2 43954420 43954580 -209302003 + L1PA2 LINE L1 5995 6154 -1 1580 240 67 26 chr2 43954649 43955143 -209301440 + L1MC4a LINE L1 6441 6960 -848 2097 123 13 7 chr2 43955143 43955452 -209301131 + AluJb SINE Alu 1 311 -1 1580 240 67 26 chr2 43955452 43955494 -209301089 + L1MC4a LINE L1 6960 6999 -809 * 1961 206 80 55 chr2 43955490 43956127 -209300456 + L1MC4 LINE L1 7238 7890 -152 422 234 206 0 chr2 43956292 43956433 -209300150 - Charlie8 DNA MER1_type -2226 191 22 351 223 16 50 chr2 43956636 43956757 -209299826 - L1MC4 LINE L1 0 8042 7926 2182 112 7 0 chr2 43956839 43957135 -209299448 + AluSx SINE Alu 1 298 -14 868 241 102 55 chr2 43957139 43957559 -209299024 - L1MC4 LINE L1 -130 7912 7473 21 0 0 0 chr2 43957950 43957971 -209298612 + AT_rich Low_complexity Low_complexity 1 21 0 566 277 66 51 chr2 43958363 43958619 -209297964 - MIR SINE MIR 0 262 3 2151 133 3 0 chr2 43959587 43959895 -209296688 - AluSx SINE Alu -3 309 1 374 319 112 6 chr2 43960271 43960440 -209296143 + L2 LINE L2 1814 2000 -1314 185 299 261 14 chr2 43960490 43960697 -209295886 + L2 LINE L2 2141 2398 -916 2318 96 0 0 chr2 43960857 43961150 -209295433 + AluY SINE Alu 1 293 -18 2209 84 10 7 chr2 43961901 43962210 -209294373 - AluY SINE Alu -1 310 1 2333 85 7 7 chr2 43962490 43962795 -209293788 - AluY SINE Alu -6 305 1 1969 128 0 35 chr2 43964252 43964392 -209292191 + AluSx SINE Alu 1 144 -168 2235 111 3 0 chr2 43964392 43964689 -209291894 + AluSq SINE Alu 1 298 -15 1969 128 0 35 chr2 43964689 43964860 -209291723 + AluSx SINE Alu 144 301 -11 514 245 134 22 chr2 43965539 43965808 -209290775 - L1ME3A LINE L1 -219 5951 5653 828 168 23 12 chr2 43965858 43966031 -209290552 + MER58A DNA MER1_type 49 223 -1 610 289 20 36 chr2 43966051 43966352 -209290231 - L1ME3A LINE L1 -526 5636 5341 1364 163 18 5 chr2 43966392 43966613 -209289970 - AluJb SINE Alu -88 224 1 1694 140 56 59 chr2 43966898 43967256 -209289327 - Tigger2 DNA MER2_type -2 2716 2360 2263 135 13 5 chr2 43967257 43967641 -209288942 + Tigger4(Zombi) DNA MER2_type 2345 2731 0 771 167 30 0 chr2 43967839 43967971 -209288612 + AluJo SINE Alu 1 136 -176 740 208 84 7 chr2 43967993 43968147 -209288436 - FRAM SINE Alu 0 166 1 1384 168 63 8 chr2 43968167 43968435 -209288148 - AluJo SINE Alu -17 295 13 375 265 44 52 chr2 43969370 43969506 -209287077 + MIR3 SINE MIR 64 198 -10 234 214 20 71 chr2 43969718 43969816 -209286767 - L1ME4a LINE L1 -93 6028 5936 265 285 57 8 chr2 43969963 43970086 -209286497 - L1ME4a LINE L1 -299 5822 5694 1761 104 39 72 chr2 43970237 43970544 -209286039 + AluSx SINE Alu 1 297 -15 271 236 22 45 chr2 43970749 43970838 -209285745 + MER94 DNA DNA 5 91 -43 627 318 23 0 chr2 43970874 43971047 -209285536 + L2 LINE L2 2577 2753 -561 249 303 107 13 chr2 43971095 43971231 -209285352 + MIR SINE MIR 2 142 -66 261 163 0 0 chr2 43972017 43972066 -209284517 + CT-rich Low_complexity Low_complexity 1 49 0 * 318 148 0 0 chr2 43972058 43972112 -209284471 + (TTTTC)n Simple_repeat Simple_repeat 5 58 0 1556 206 0 40 chr2 43972131 43972456 -209284127 - AluJo SINE Alu 0 312 1 235 296 198 12 chr2 43972913 43972994 -209283589 - MIR SINE MIR -68 140 45 2405 81 3 3 chr2 43973467 43973775 -209282808 - AluSc SINE Alu -1 308 1 1047 104 110 0 chr2 43974342 43974506 -209282077 + AluSp SINE Alu 116 297 -16 1904 150 0 40 chr2 43974583 43974909 -209281674 - AluSq SINE Alu 0 313 1 1400 112 121 0 chr2 43975449 43975698 -209280885 + MER7A DNA MER2_type 40 316 -30 1709 198 3 7 chr2 43976046 43976354 -209280229 - AluJb SINE Alu -5 307 1 354 259 9 9 chr2 43976762 43976878 -209279705 - L1M4 LINE L1 -878 5268 5153 1753 144 28 10 chr2 43976881 43977172 -209279411 - AluJb SINE Alu -8 304 9 254 259 0 12 chr2 43977223 43977304 -209279279 - L1M4 LINE L1 -1125 5021 4942 21 0 0 0 chr2 43977383 43977404 -209279179 + AT_rich Low_complexity Low_complexity 1 21 0 217 339 92 28 chr2 43978423 43978532 -209278051 + MIR SINE MIR 8 123 -139 221 239 0 0 chr2 43978545 43978612 -209277971 + (TTAA)n Simple_repeat Simple_repeat 3 69 0 1672 157 28 7 chr2 43979443 43979729 -209276854 - AluJb SINE Alu -16 296 5 634 259 54 6 chr2 43980278 43980444 -209276139 + MIR SINE MIR 3 176 -86 214 337 66 18 chr2 43980590 43980756 -209275827 - L2 LINE L2 -1605 1709 1536 850 144 0 29 chr2 43980792 43980931 -209275652 + FLAM_C SINE Alu 1 135 -8 2231 72 0 53 chr2 43982397 43982701 -209273882 + AluY SINE Alu 1 288 -23 736 213 50 26 chr2 43983580 43983772 -209272811 - MIR SINE MIR -1 261 67 2181 179 52 41 chr2 43983814 43984169 -209272414 + L1MA7 LINE L1 5589 5953 -338 2333 97 0 3 chr2 43984169 43984469 -209272114 + AluSx SINE Alu 1 299 -13 2181 179 52 41 chr2 43984469 43984628 -209271955 + L1MA7 LINE L1 5953 6109 -182 577 183 0 0 chr2 43984628 43984721 -209271862 + AluJ/FLAM SINE Alu 1 93 -219 1338 198 0 27 chr2 43984741 43984785 -209271798 + AluJo SINE Alu 50 94 -218 3013 91 84 0 chr2 43984785 43985203 -209271380 - MLT2A2 LTR ERVL 0 453 1 1338 198 0 27 chr2 43985203 43985416 -209271167 + AluJo SINE Alu 94 300 -12 836 193 16 16 chr2 43985417 43985604 -209270979 + L1MA7 LINE L1 6099 6285 -6 266 298 128 73 chr2 43986210 43986308 -209270275 - MIR SINE MIR 0 262 171 1730 174 7 4 chr2 43986308 43986589 -209269994 - AluJo SINE Alu -30 282 1 266 298 128 73 chr2 43986589 43986708 -209269875 - MIR SINE MIR -91 171 33 1264 223 33 21 chr2 43986746 43987078 -209269505 - MER58B DNA MER1_type 0 341 6 206 219 0 0 chr2 43987882 43987923 -209268660 + MIR SINE MIR 220 260 -2 252 233 183 17 chr2 43988455 43988575 -209268008 - L1MC4a LINE L1 -159 7649 7555 1479 221 7 7 chr2 43988594 43988883 -209267700 - AluJo SINE Alu -23 289 1 812 138 29 96 chr2 43988883 43989123 -209267460 - L1MC4 LINE L1 -396 7646 7423 318 295 80 9 chr2 43989209 43989321 -209267262 + MIR SINE MIR 41 160 -102 31 0 0 0 chr2 43990714 43990745 -209265838 + AT_rich Low_complexity Low_complexity 1 31 0 2210 108 16 3 chr2 43990796 43991102 -209265481 - AluSg SINE Alu 0 310 1 231 100 0 0 chr2 43991121 43991161 -209265422 - Alu SINE Alu -1 301 262 344 338 55 0 chr2 43991180 43991325 -209265258 - L1ME3A LINE L1 -30 6140 5988 302 175 95 0 chr2 43991769 43991832 -209264751 - MIR SINE MIR -70 192 124 293 250 50 0 chr2 43991897 43991997 -209264586 + MER113 DNA MER1_type? 2 106 -415 2094 115 3 0 chr2 43992017 43992337 -209264246 + AluSp SINE Alu 1 321 0 2349 130 220 133 chr2 43992349 43992881 -209263702 - L1MC3 LINE L1 -22 7763 7051 330 210 0 49 chr2 43992881 43992962 -209263621 - MLT1F1 LTR MaLR -445 122 46 2349 130 220 133 chr2 43992962 43993220 -209263363 - L1MC3 LINE L1 -734 7051 6817 274 231 62 0 chr2 43993320 43993385 -209263198 + MER113 DNA MER1_type? 320 388 -133 2074 141 7 3 chr2 43994206 43994512 -209262071 - AluSx SINE Alu -2 310 4 258 293 71 10 chr2 43995216 43995315 -209261268 + MIR3 SINE MIR 2 106 -102 1003 175 179 45 chr2 43995543 43995834 -209260749 - L1ME3A LINE L1 -88 6082 5753 25 0 0 0 chr2 43996108 43996133 -209260450 + AT_rich Low_complexity Low_complexity 1 25 0 185 237 0 0 chr2 43996308 43996346 -209260237 - L2 LINE L2 -4 3268 3231 1471 220 137 23 chr2 43996904 43997400 -209259183 - MLT1H1 LTR MaLR -10 585 6 1776 173 25 0 chr2 43997439 43997722 -209258861 - AluJb SINE Alu -22 290 1 319 307 80 12 chr2 43997892 43998055 -209258528 - L1MC4 LINE L1 -1 8041 7868 2053 138 3 16 chr2 43998282 43998594 -209257989 - AluSx SINE Alu -4 308 1 2402 87 0 0 chr2 43998600 43998910 -209257673 - AluSg SINE Alu 0 310 1 461 287 171 31 chr2 43999652 43999910 -209256673 - L3b LINE CR1 -71 1512 1219 3146 128 62 8 chr2 44000387 44000887 -209255696 + MER1A DNA MER1_type 1 527 0 622 230 0 30 chr2 44001197 44001332 -209255251 - FLAM_A SINE Alu -2 131 1 1321 181 13 4 chr2 44001569 44001806 -209254777 - MER8 DNA MER2_type 0 239 1 2112 116 0 26 chr2 44002005 44002316 -209254267 + AluSx SINE Alu 1 303 -9 7555 116 48 20 chr2 44002552 44003773 -209252810 + Tigger1 DNA MER2_type 1 1254 -1164 1848 164 10 7 chr2 44003773 44003947 -209252636 - AluJb SINE Alu -6 306 134 231 114 0 0 chr2 44003947 44003991 -209252592 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 2083 124 0 0 chr2 44003991 44004273 -209252310 - AluSq SINE Alu -31 282 1 1848 164 10 7 chr2 44004273 44004402 -209252181 - AluJb SINE Alu -177 135 1 30 0 0 0 chr2 44004554 44004584 -209251999 + AT_rich Low_complexity Low_complexity 1 30 0 1541 188 66 6 chr2 44004664 44004983 -209251600 + MER58B DNA MER1_type 4 341 0 2190 80 0 24 chr2 44005152 44005474 -209251109 - AluY SINE Alu 0 315 1 3432 175 50 15 chr2 44006411 44007137 -209249446 - L1MB8 LINE L1 0 6178 5428 3279 156 65 5 chr2 44007137 44007766 -209248817 - L1MB4 LINE L1 0 6180 5510 406 171 0 0 chr2 44007771 44007847 -209248736 - L1MB4 LINE L1 -791 5387 5312 * 547 266 115 27 chr2 44007841 44008179 -209248404 - L1ME LINE L1 -538 5632 5265 203 303 91 0 chr2 44008258 44008324 -209248259 + L2 LINE L2 3242 3313 0 1492 144 13 47 chr2 44008634 44008747 -209247836 + L1MA8 LINE L1 5999 6114 -177 2085 104 4 0 chr2 44008747 44009063 -209247520 + AluSg SINE Alu 1 317 0 1492 144 13 47 chr2 44009063 44009246 -209247337 + L1MA8 LINE L1 6114 6286 -5 1203 176 83 70 chr2 44009474 44009776 -209246807 - AluJb SINE Alu -6 306 1 21 0 0 0 chr2 44009843 44009864 -209246719 + AT_rich Low_complexity Low_complexity 1 21 0 1467 172 102 25 chr2 44009958 44010283 -209246300 + Tigger2a DNA MER2_type 1 350 -84 1957 158 0 3 chr2 44010500 44010810 -209245773 - AluSx SINE Alu -3 309 1 365 290 91 16 chr2 44011957 44012143 -209244440 - L2 LINE L2 -926 2388 2189 425 355 47 61 chr2 44012203 44012631 -209243952 - L2 LINE L2 -1324 1990 1569 261 0 0 0 chr2 44013077 44013106 -209243477 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 1111 163 126 29 chr2 44013411 44013650 -209242933 - AluJo SINE Alu -15 297 36 1589 155 127 29 chr2 44015946 44016085 -209240498 - MER7A DNA MER2_type -2693 345 221 3238 138 33 6 chr2 44016085 44016598 -209239985 - MER1A DNA MER1_type 0 527 1 1589 155 127 29 chr2 44016598 44016774 -209239809 - MER7A DNA MER2_type -2817 221 1 258 361 41 10 chr2 44017854 44017951 -209238632 + L2 LINE L2 2659 2758 -556 338 354 50 17 chr2 44018562 44018743 -209237840 - L2 LINE L2 -421 2893 2707 606 217 37 12 chr2 44018752 44018913 -209237670 + MER104 DNA Tc2 16 180 0 1197 234 78 5 chr2 44019154 44019525 -209237058 + L1M4 LINE L1 4944 5341 -805 1868 160 0 22 chr2 44019587 44019906 -209236677 + AluJb SINE Alu 1 312 0 322 204 97 21 chr2 44019908 44020001 -209236582 + L1MB5 LINE L1 3100 3199 -2947 2029 161 77 0 chr2 44020052 44020431 -209236152 + L1MB5 LINE L1 5485 5892 -282 226 152 43 0 chr2 44020445 44020491 -209236092 + L1MB5 LINE L1 5987 6034 -140 2230 75 4 0 chr2 44020495 44020798 -209235785 - AluY SINE Alu 0 304 1 768 153 33 0 chr2 44020798 44020948 -209235635 + L1MB4 LINE L1 6018 6172 -8 2388 66 0 7 chr2 44022968 44023269 -209233314 + AluY SINE Alu 1 299 -12 29 28 0 0 chr2 44023790 44023826 -209232757 + AT_rich Low_complexity Low_complexity 1 36 0 2069 118 3 0 chr2 44023826 44024114 -209232469 - AluSp SINE Alu -24 289 1 2106 134 0 0 chr2 44024381 44024671 -209231912 + AluSx SINE Alu 3 292 -20 2511 74 0 3 chr2 44025133 44025444 -209231139 - AluY SINE Alu -1 310 1 959 107 0 15 chr2 44025446 44025577 -209231006 - AluJo/FLAM SINE Alu -181 131 3 2096 119 7 0 chr2 44025586 44025880 -209230703 - AluSx SINE Alu -16 296 1 202 224 0 20 chr2 44026541 44026590 -209229993 + GA-rich Low_complexity Low_complexity 4 51 0 2445 79 0 0 chr2 44028813 44029117 -209227466 - AluSc SINE Alu -5 304 1 2103 96 0 4 chr2 44029166 44029438 -209227145 - AluSc SINE Alu -33 276 6 1882 143 13 32 chr2 44029518 44029832 -209226751 - AluJb SINE Alu -4 308 1 391 326 82 30 chr2 44029941 44030076 -209226507 - MER5B DNA MER1_type -20 158 17 1733 119 32 77 chr2 44030507 44030819 -209225764 - AluSx SINE Alu -14 298 1 974 141 0 0 chr2 44030819 44030954 -209225629 - AluSq/x SINE Alu -177 135 1 1713 163 11 0 chr2 44031779 44032056 -209224527 - AluJo SINE Alu -30 282 3 21 0 0 0 chr2 44032065 44032086 -209224497 + AT_rich Low_complexity Low_complexity 1 21 0 226 338 122 0 chr2 44032140 44032279 -209224304 + MIR SINE MIR 51 206 -56 293 250 45 114 chr2 44032297 44032419 -209224164 - L2 LINE L2 -896 2418 2309 558 264 167 22 chr2 44032419 44032646 -209223937 + MIR SINE MIR 1 260 -2 866 200 30 1 chr2 44033530 44033830 -209222753 - MER2 DNA MER2_type 0 345 6 1643 191 7 3 chr2 44033859 44034152 -209222431 - AluJo SINE Alu -18 294 1 23 0 0 0 chr2 44034664 44034687 -209221896 + AT_rich Low_complexity Low_complexity 1 23 0 744 280 175 50 chr2 44034805 44035187 -209221396 - L2 LINE L2 0 3313 2884 203 246 82 0 chr2 44035515 44035576 -209221007 + MIR3 SINE MIR 112 177 -31 1314 158 10 5 chr2 44035691 44035900 -209220683 + AluJo SINE Alu 1 210 -102 1775 182 7 0 chr2 44036311 44036608 -209219975 - AluJb SINE Alu -13 299 1 22 0 0 0 chr2 44036697 44036719 -209219864 + AT_rich Low_complexity Low_complexity 1 22 0 1927 98 94 4 chr2 44037235 44037511 -209219072 + AluSx SINE Alu 1 301 -11 646 142 47 0 chr2 44037891 44037997 -209218586 - AluSp SINE Alu -202 111 1 185 299 26 39 chr2 44039172 44039249 -209217334 + MIR3 SINE MIR 132 207 -1 1075 201 94 10 chr2 44040485 44040784 -209215799 - MER33 DNA MER1_type 0 324 1 419 260 31 0 chr2 44040856 44040952 -209215631 + MIR3 SINE MIR 98 196 -12 234 288 47 13 chr2 44041072 44041150 -209215433 - MIR SINE MIR -125 83 3 518 281 88 56 chr2 44041574 44041859 -209214724 + MER102a DNA MER1_type 2 295 -35 192 239 125 34 chr2 44042066 44042154 -209214429 - MIR SINE MIR -54 208 113 2440 78 3 0 chr2 44042985 44043281 -209213302 - AluSg SINE Alu -13 297 1 2109 137 0 3 chr2 44043705 44044018 -209212565 + AluSx SINE Alu 1 312 0 2135 125 7 7 chr2 44044068 44044363 -209212220 + AluSq SINE Alu 3 297 -16 2262 163 95 26 chr2 44044533 44044876 -209211707 - L1PA16 LINE L1 -330 5836 5518 2342 64 0 55 chr2 44044876 44045188 -209211395 - AluY SINE Alu -16 295 1 216 0 0 0 chr2 44045196 44045220 -209211363 + (TTA)n Simple_repeat Simple_repeat 1 24 0 2262 163 95 26 chr2 44045220 44045497 -209211086 - L1PA16 LINE L1 -654 5512 5177 25 31 0 0 chr2 44045684 44045716 -209210867 + AT_rich Low_complexity Low_complexity 1 32 0 1462 161 141 20 chr2 44045812 44046117 -209210466 - MER2 DNA MER2_type -1 343 2 2272 106 0 3 chr2 44046526 44046827 -209209756 + AluSg SINE Alu 1 300 -10 378 246 51 46 chr2 44046919 44047101 -209209482 + MIR SINE MIR 2 212 -50 345 344 93 38 chr2 44047434 44047725 -209208858 + L2 LINE L2 3005 3311 -2 1540 158 25 22 chr2 44047828 44048106 -209208477 - AluJb SINE Alu -33 279 1 22 80 0 0 chr2 44048907 44048957 -209207626 + AT_rich Low_complexity Low_complexity 1 50 0 530 331 52 0 chr2 44049129 44049380 -209207203 + L1MC4a LINE L1 5665 5928 -1880 207 0 0 0 chr2 44050482 44050505 -209206078 + (TTAA)n Simple_repeat Simple_repeat 2 24 0 636 175 8 33 chr2 44050505 44050625 -209205958 - FLAM_A SINE Alu -16 117 1 239 271 47 47 chr2 44050789 44050874 -209205709 + MIR3 SINE MIR 111 195 -13 736 217 64 72 chr2 44050938 44051001 -209205582 + MIR SINE MIR 12 74 -188 2172 125 0 3 chr2 44051001 44051313 -209205270 - AluY SINE Alu 0 311 1 736 217 64 72 chr2 44051313 44051484 -209205099 + MIR SINE MIR 74 244 -18 496 319 179 16 chr2 44054710 44055146 -209201437 + L2 LINE L2 2035 2541 -773 1863 144 0 59 chr2 44055200 44055520 -209201063 + AluSx SINE Alu 1 301 -11 21 57 0 0 chr2 44055737 44055772 -209200811 + AT_rich Low_complexity Low_complexity 1 35 0 26 58 0 29 chr2 44055822 44055858 -209200725 + AT_rich Low_complexity Low_complexity 1 36 -31 1835 149 0 20 chr2 44055858 44056153 -209200430 + AluJb SINE Alu 1 289 -23 26 58 0 29 chr2 44056153 44056185 -209200398 + AT_rich Low_complexity Low_complexity 36 67 0 936 281 140 9 chr2 44056194 44056813 -209199770 + L1ME3A LINE L1 4459 4996 -1166 2215 108 7 16 chr2 44056813 44057120 -209199463 - AluSx SINE Alu -8 304 1 936 281 140 9 chr2 44057120 44057468 -209199115 + L1ME3A LINE L1 4996 5559 -603 1401 264 63 16 chr2 44057635 44058202 -209198381 + L1ME3A LINE L1 5565 6169 -1 1681 147 38 3 chr2 44058523 44058815 -209197768 - AluJo SINE Alu -10 302 1 22 56 0 0 chr2 44058962 44058998 -209197585 + AT_rich Low_complexity Low_complexity 1 36 0 2170 102 3 3 chr2 44059030 44059323 -209197260 - AluSg1 SINE Alu -16 293 1 2050 135 0 3 chr2 44059828 44060125 -209196458 + AluSx SINE Alu 1 296 -16 189 0 0 0 chr2 44061892 44061913 -209194670 + (TC)n Simple_repeat Simple_repeat 2 22 0 285 243 0 14 chr2 44062253 44062327 -209194256 - Tigger5 DNA MER2_type 0 2323 2251 2211 163 7 49 chr2 44064781 44065091 -209191492 - L1MB7 LINE L1 -9 6175 5888 2265 100 13 0 chr2 44065091 44065400 -209191183 - AluSq SINE Alu 0 313 1 2211 163 7 49 chr2 44065400 44065538 -209191045 - L1MB7 LINE L1 -296 5888 5746 235 317 29 48 chr2 44066197 44066301 -209190282 + MIR SINE MIR 43 144 -64 26 50 0 0 chr2 44067562 44067602 -209188981 + AT_rich Low_complexity Low_complexity 1 40 0 701 188 14 0 chr2 44067624 44067768 -209188815 - L1MA6 LINE L1 -5 6295 6150 285 203 94 109 chr2 44067775 44067903 -209188680 - MIR SINE MIR -74 188 63 2295 107 0 0 chr2 44067948 44068248 -209188335 - AluSx SINE Alu -12 300 1 2471 63 0 0 chr2 44069058 44069360 -209187223 + AluY SINE Alu 1 302 -9 364 257 33 86 chr2 44070104 44070256 -209186327 - L2 LINE L2 -4 3309 3166 1993 107 11 0 chr2 44070275 44070538 -209186045 + AluSx SINE Alu 25 290 -22 709 148 70 0 chr2 44070552 44070667 -209185916 + FLAM_C SINE Alu 9 131 -12 22 56 0 0 chr2 44070962 44070998 -209185585 + AT_rich Low_complexity Low_complexity 1 36 0 198 290 122 38 chr2 44071863 44071899 -209184684 - MIR SINE MIR -12 250 218 2392 70 10 32 chr2 44071899 44072213 -209184370 - AluY SINE Alu -4 307 1 198 290 122 38 chr2 44072213 44072307 -209184276 - MIR SINE MIR -44 218 109 207 0 0 0 chr2 44073056 44073079 -209183504 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 1944 126 11 3 chr2 44073084 44073369 -209183214 - AluSq SINE Alu -26 287 1 1732 141 45 24 chr2 44073636 44073927 -209182656 + AluJb SINE Alu 2 298 -14 3483 170 88 37 chr2 44074010 44074538 -209182045 - L1MB7 LINE L1 -27 6157 5657 1871 161 0 40 chr2 44074538 44074862 -209181721 + AluJo SINE Alu 1 311 -1 3483 170 88 37 chr2 44074862 44075328 -209181255 - L1MB7 LINE L1 -527 5657 5114 1207 210 10 26 chr2 44075331 44075636 -209180947 - L1MB7 LINE L1 -1078 5068 4769 351 213 0 0 chr2 44075687 44075767 -209180816 + CT-rich Low_complexity Low_complexity 4 83 0 1999 144 10 3 chr2 44075769 44076060 -209180523 - AluSx SINE Alu -19 293 1 1642 122 111 8 chr2 44076705 44076967 -209179616 + AluJb SINE Alu 6 294 -18 31 44 0 0 chr2 44077261 44077306 -209179277 + AT_rich Low_complexity Low_complexity 1 45 0 755 171 0 0 chr2 44077307 44077424 -209179159 - FLAM_C SINE Alu -26 117 1 2456 118 52 59 chr2 44077654 44077972 -209178611 + MER4B LTR ERV1 1 320 -459 2240 102 0 0 chr2 44077972 44078267 -209178316 - AluY SINE Alu -16 295 1 2456 118 52 59 chr2 44078267 44078361 -209178222 + MER4B LTR ERV1 320 413 -366 2294 84 0 26 chr2 44078361 44078670 -209177913 - AluY SINE Alu -10 301 1 2456 118 52 59 chr2 44078670 44078855 -209177728 + MER4B LTR ERV1 413 770 -9 2102 102 3 33 chr2 44079060 44079364 -209177219 + AluSx SINE Alu 1 295 -17 2303 92 0 3 chr2 44079492 44079785 -209176798 + AluSx SINE Alu 2 293 -19 1548 193 7 29 chr2 44081008 44081314 -209175269 + AluJo SINE Alu 3 301 -11 401 136 17 0 chr2 44083604 44083663 -209172920 + MIR SINE MIR 2 61 -201 1536 152 81 27 chr2 44084122 44084418 -209172165 - AluJo SINE Alu 0 312 1 236 345 0 23 chr2 44084541 44084628 -209171955 - MIR SINE MIR -92 116 32 479 243 65 8 chr2 44085027 44085171 -209171412 + MIR SINE MIR 34 184 -67 719 139 0 33 chr2 44085636 44085758 -209170825 + FLAM_C SINE Alu 16 133 -10 411 330 87 23 chr2 44085773 44085946 -209170637 + MIR SINE MIR 31 214 -48 2357 64 7 3 chr2 44086516 44086812 -209169771 + AluY SINE Alu 1 297 -14 280 222 74 94 chr2 44086863 44087066 -209169517 - MLT1J LTR MaLR -140 371 173 332 314 163 15 chr2 44087148 44087473 -209169110 + L1M4 LINE L1 4286 4658 -1488 317 320 47 16 chr2 44087498 44087626 -209168957 + L1M4 LINE L1 4777 4908 -1238 419 294 8 0 chr2 44087684 44087810 -209168773 - MER3 DNA MER1_type -78 131 5 190 152 217 0 chr2 44087872 44087918 -209168665 + MER5B DNA MER1_type 123 178 0 2022 131 9 38 chr2 44089069 44089389 -209167194 + AluSx SINE Alu 1 311 -1 2033 128 17 3 chr2 44089427 44089723 -209166860 + AluSx SINE Alu 1 300 -12 1885 160 0 10 chr2 44089748 44090042 -209166541 + AluJb SINE Alu 1 291 -21 422 73 0 15 chr2 44090986 44091054 -209165529 + (TA)n Simple_repeat Simple_repeat 2 68 0 3157 156 60 27 chr2 44091960 44092014 -209164569 - L1MB8 LINE L1 0 6178 6127 2250 112 0 0 chr2 44092014 44092309 -209164274 + AluSx SINE Alu 1 295 -17 3157 156 60 27 chr2 44092309 44092930 -209163653 - L1MB8 LINE L1 -51 6127 5484 21 0 0 0 chr2 44093519 44093540 -209163043 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 44094717 44094741 -209161842 + AT_rich Low_complexity Low_complexity 1 24 0 1906 114 21 17 chr2 44099477 44099766 -209156817 + AluJb SINE Alu 2 291 -21 1976 119 3 33 chr2 44099961 44100264 -209156319 - AluSx SINE Alu -2 310 17 233 158 146 82 chr2 44100345 44100453 -209156130 + L1MC5 LINE L1 7545 7668 -293 2141 136 0 0 chr2 44100453 44100755 -209155828 + AluSx SINE Alu 1 302 -10 233 158 146 82 chr2 44100755 44100804 -209155779 + L1MC5 LINE L1 7668 7712 -249 295 250 281 12 chr2 44100978 44101138 -209155445 - MIR SINE MIR -52 210 8 301 226 80 51 chr2 44102275 44102412 -209154171 - L2 LINE L2 -3 3310 3170 921 228 193 35 chr2 44102676 44103158 -209153425 + L1MD2 LINE L1 5785 6342 -17 180 179 0 0 chr2 44104976 44105015 -209151568 + CT-rich Low_complexity Low_complexity 2 40 0 229 353 37 14 chr2 44105092 44105310 -209151273 - L1ME3 LINE L1 -67 6095 5873 2056 197 198 43 chr2 44109470 44109985 -209146598 - Charlie2 DNA MER1_type -6 2856 2423 2213 102 3 0 chr2 44109985 44110278 -209146305 + AluY SINE Alu 1 294 -17 2056 197 198 43 chr2 44110278 44110515 -209146068 - Charlie2 DNA MER1_type -439 2423 2224 2365 105 0 0 chr2 44110515 44110819 -209145764 + AluSp SINE Alu 1 304 -9 2056 197 198 43 chr2 44110819 44110932 -209145651 - Charlie2 DNA MER1_type -638 2224 1855 497 276 135 24 chr2 44110902 44111199 -209145384 - Charlie2 DNA MER1_type -2435 347 18 * 1453 161 82 14 chr2 44111911 44112190 -209144393 + AluJo SINE Alu 1 298 -14 24 67 0 0 chr2 44112225 44112270 -209144313 + AT_rich Low_complexity Low_complexity 1 45 0 1351 137 184 20 chr2 44112324 44112579 -209144004 - AluSx SINE Alu -15 297 1 722 310 71 15 chr2 44112588 44112981 -209143602 + L1MC4 LINE L1 5421 5835 -1973 2312 95 3 0 chr2 44113054 44113350 -209143233 + AluSp SINE Alu 1 297 -16 2311 217 140 81 chr2 44113396 44114052 -209142531 + L1MC4 LINE L1 6848 7464 -578 2136 129 0 3 chr2 44114052 44114346 -209142237 + AluSc SINE Alu 2 294 -15 2311 217 140 81 chr2 44114346 44114422 -209142161 + L1MC4 LINE L1 7464 7534 -508 3190 149 51 27 chr2 44114422 44115045 -209141538 + L1MB8 LINE L1 5536 6173 -5 2311 217 140 81 chr2 44115045 44115439 -209141144 + L1MC4 LINE L1 7534 8042 0 23 0 0 0 chr2 44116548 44116571 -209140012 + AT_rich Low_complexity Low_complexity 1 23 0 1854 154 3 33 chr2 44117106 44117411 -209139172 + AluJb SINE Alu 1 296 -16 1475 185 83 0 chr2 44117597 44117862 -209138721 - AluJo SINE Alu -25 287 1 1588 187 19 22 chr2 44119327 44119691 -209136892 + L1MB8 LINE L1 5816 6178 0 522 300 92 13 chr2 44120258 44120485 -209136098 - MIR SINE MIR 0 262 18 2489 90 0 0 chr2 44121129 44121440 -209135143 - AluSx SINE Alu -1 311 1 432 195 16 57 chr2 44121442 44121565 -209135018 - AluJb SINE Alu -10 302 185 1027 234 47 38 chr2 44121566 44121908 -209134675 + L2 LINE L2 2962 3306 -7 1832 164 17 7 chr2 44122059 44122352 -209134231 + AluJb SINE Alu 1 296 -16 1622 181 13 20 chr2 44122722 44123026 -209133557 - AluJo SINE Alu -10 302 1 1316 198 34 4 chr2 44123421 44123684 -209132899 - L1M4 LINE L1 -544 5640 5370 594 226 0 44 chr2 44124265 44124402 -209132181 + FLAM_A SINE Alu 2 132 -1 347 216 36 63 chr2 44124429 44124540 -209132043 + L1ME2 LINE L1 5770 5877 -285 572 261 31 0 chr2 44124540 44124670 -209131913 + FRAM SINE Alu 1 133 -43 706 222 87 34 chr2 44124670 44124877 -209131706 + L1ME2 LINE L1 5912 6129 -35 833 108 8 16 chr2 44125311 44125440 -209131143 - FLAM_C SINE Alu -5 128 1 315 184 48 48 chr2 44125728 44125831 -209130752 - MIR SINE MIR -132 130 28 688 188 123 6 chr2 44127833 44128003 -209128580 - MIR SINE MIR -68 194 5 2105 125 6 16 chr2 44128278 44128591 -209127992 - AluJb SINE Alu -2 310 1 1683 11 0 0 chr2 44129506 44129686 -209126897 + AluY SINE Alu 123 302 -9 2143 137 0 0 chr2 44130759 44131065 -209125518 + AluSq SINE Alu 1 306 -7 2025 128 21 0 chr2 44131562 44131851 -209124732 + AluJb SINE Alu 1 295 -17 200 264 100 0 chr2 44131871 44131952 -209124631 + MIR SINE MIR 32 123 -85 287 266 0 13 chr2 44132632 44132711 -209123872 + MIR SINE MIR 47 124 -84 318 174 330 0 chr2 44134017 44134132 -209122451 + MIR SINE MIR 96 248 -14 193 138 0 0 chr2 44134236 44134265 -209122318 + L2 LINE L2 3226 3254 -18 2420 93 0 0 chr2 44135756 44136066 -209120517 + AluY SINE Alu 1 310 -1 976 176 118 0 chr2 44136232 44136419 -209120164 + MER3 DNA MER1_type 1 209 0 1965 147 13 7 chr2 44136503 44136803 -209119780 + AluJo SINE Alu 1 302 -10 575 259 105 22 chr2 44138443 44138671 -209117912 + MIR SINE MIR 16 262 0 1312 91 10 35 chr2 44138714 44138911 -209117672 - AluSg/x SINE Alu 0 312 121 339 25 0 0 chr2 44138978 44139018 -209117565 + (TG)n Simple_repeat Simple_repeat 1 40 0 1245 128 44 0 chr2 44139030 44139233 -209117350 - L1MB3 LINE L1 -39 6144 5933 1908 147 0 13 chr2 44139234 44139534 -209117049 - AluJb SINE Alu -15 297 2 313 184 312 37 chr2 44139549 44139658 -209116925 + L2 LINE L2 3134 3272 0 1793 162 16 23 chr2 44139954 44140263 -209116320 + AluJo SINE Alu 3 309 -3 401 262 74 47 chr2 44140438 44140462 -209116121 + L1ME4a LINE L1 5593 5615 -506 2353 67 7 23 chr2 44140462 44140762 -209115821 + AluSc SINE Alu 1 295 -14 401 262 74 47 chr2 44140762 44140993 -209115590 + L1ME4a LINE L1 5615 5855 -266 836 233 147 22 chr2 44141031 44141459 -209115124 - MLT1J LTR MaLR -1 510 1 290 198 190 33 chr2 44141488 44141609 -209114974 + L1ME4a LINE L1 5981 6120 -1 2373 84 10 0 chr2 44141904 44142201 -209114382 + AluSp SINE Alu 1 300 -13 482 244 107 66 chr2 44143020 44143123 -209113460 - L1MC/D LINE L1 -2009 5799 5702 1660 178 21 11 chr2 44143123 44143410 -209113173 + AluJo SINE Alu 1 290 -22 207 0 0 0 chr2 44143410 44143433 -209113150 + (TG)n Simple_repeat Simple_repeat 2 24 0 482 244 107 66 chr2 44143433 44143570 -209113013 - L1MC/D LINE L1 -2105 5703 5548 308 256 16 39 chr2 44143787 44143916 -209112667 - L1MC/D LINE L1 -662 5504 5379 2391 95 0 0 chr2 44144141 44144437 -209112146 + AluSc SINE Alu 1 296 -13 654 178 76 54 chr2 44144574 44144632 -209111951 + MER53 DNA DNA 1 56 -133 477 167 167 83 chr2 44144632 44144752 -209111831 + FLAM_A SINE Alu 1 130 -3 654 178 76 54 chr2 44144752 44144878 -209111705 + MER53 DNA DNA 56 189 0 2510 175 46 28 chr2 44144914 44145318 -209111265 - MLT1D LTR MaLR 0 505 88 2251 99 3 0 chr2 44145318 44145637 -209110946 - AluSx SINE Alu 0 320 1 2510 175 46 28 chr2 44145637 44145727 -209110856 - MLT1D LTR MaLR -417 88 1 191 256 70 23 chr2 44145863 44145949 -209110634 + L2 LINE L2 3179 3268 -4 2271 119 0 0 chr2 44146674 44146976 -209109607 - AluSx SINE Alu -7 305 4 231 279 16 0 chr2 44147529 44147590 -209108993 - L2 LINE L2 0 3313 3252 2322 78 3 7 chr2 44148185 44148479 -209108104 - AluSc SINE Alu -16 293 1 3198 110 25 41 chr2 44150945 44151303 -209105280 - MER34B LTR ERV1 -54 511 162 2469 93 0 0 chr2 44151303 44151616 -209104967 + AluSq SINE Alu 1 313 0 3198 110 25 41 chr2 44151616 44151774 -209104809 - MER34B LTR ERV1 -403 162 3 281 338 56 14 chr2 44152227 44152369 -209104214 + L2 LINE L2 3087 3234 -38 2287 105 0 0 chr2 44152414 44152709 -209103874 - AluSq SINE Alu -18 295 1 296 299 8 34 chr2 44153357 44153474 -209103109 + MIR3 SINE MIR 8 121 -87 435 226 110 92 chr2 44153817 44153863 -209102720 - L1ME4a LINE L1 -53 6068 6024 1108 174 186 52 chr2 44153863 44154207 -209102376 - MLT1B LTR MaLR 0 390 1 435 226 110 92 chr2 44154207 44154320 -209102263 - L1ME4a LINE L1 -97 6024 5914 2130 135 3 0 chr2 44154320 44154631 -209101952 - AluSx SINE Alu 0 312 1 435 226 110 92 chr2 44154631 44154807 -209101776 - L1ME4a LINE L1 -207 5914 5726 259 330 116 0 chr2 44154840 44154952 -209101631 - L1ME4a LINE L1 -477 5644 5520 1263 213 0 14 chr2 44154962 44155248 -209101335 - L1MD3 LINE L1 0 7995 7714 2916 3 0 0 chr2 44157010 44157316 -209099267 - AluYa5 SINE Alu -5 306 1 2418 176 29 2 chr2 44157907 44158356 -209098227 - LOR1b LTR ERV1 0 461 1 638 238 25 19 chr2 44158465 44158625 -209097958 + MIR SINE MIR 86 246 -16 610 217 65 148 chr2 44158648 44158695 -209097888 - MLT1J LTR MaLR -60 451 402 2226 118 0 0 chr2 44158695 44158992 -209097591 + AluSx SINE Alu 3 299 -13 610 217 65 148 chr2 44158992 44159201 -209097382 - MLT1J LTR MaLR -109 402 227 2285 116 0 0 chr2 44159201 44159495 -209097088 - AluSx SINE Alu -18 294 1 610 217 65 148 chr2 44159495 44159574 -209097009 - MLT1J LTR MaLR -284 227 143 417 269 84 0 chr2 44159557 44159676 -209096907 - MLT1J LTR MaLR -312 199 71 * 517 71 0 14 chr2 44159923 44159993 -209096590 + MER4B LTR ERV1 1 69 -595 1598 101 34 22 chr2 44160006 44160308 -209096275 + MER4B LTR ERV1 261 610 0 909 241 104 21 chr2 44160498 44160834 -209095749 + HAL1 LINE L1 11 374 -2133 368 45 0 0 chr2 44160834 44160878 -209095705 + AluY SINE Alu 1 44 -258 1995 176 5 35 chr2 44161006 44161087 -209095496 - MER47A DNA MER2_type -1959 364 282 1752 170 17 14 chr2 44161087 44161381 -209095202 + AluJo SINE Alu 1 295 -17 1995 176 5 35 chr2 44161381 44161674 -209094909 - MER47A DNA MER2_type -2041 282 1 534 266 102 44 chr2 44162243 44162391 -209094192 + L1MC4a LINE L1 5673 5811 -1997 2094 113 51 0 chr2 44162391 44162683 -209093900 + AluSq SINE Alu 1 307 -6 534 266 102 44 chr2 44162683 44162808 -209093775 + L1MC4a LINE L1 5811 5962 -1846 238 252 122 9 chr2 44163065 44163172 -209093411 + L1ME4a LINE L1 5972 6090 -31 2413 91 0 0 chr2 44163356 44163707 -209092876 + AluY SINE Alu 1 311 0 339 170 44 77 chr2 44164351 44164459 -209092124 - L1MEd LINE L1 -751 5378 5284 2088 137 3 10 chr2 44164459 44164773 -209091810 - AluJb SINE Alu 0 312 1 339 170 44 77 chr2 44164773 44164827 -209091756 - L1MEd LINE L1 -845 5284 5230 189 0 0 0 chr2 44164944 44164965 -209091618 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 944 157 0 7 chr2 44165388 44165535 -209091048 + AluJb SINE Alu 149 294 -18 283 244 17 11 chr2 44166496 44166672 -209089911 + (TA)n Simple_repeat Simple_repeat 2 178 0 198 118 0 0 chr2 44166835 44166869 -209089714 + (TA)n Simple_repeat Simple_repeat 2 35 0 1806 156 21 7 chr2 44166869 44167152 -209089431 - AluJo SINE Alu -25 287 1 770 150 0 0 chr2 44167187 44167333 -209089250 + AluSg/x SINE Alu 172 317 0 2168 177 171 0 chr2 44167348 44167788 -209088795 + MLT2B2 LTR ERVL 1 515 0 913 118 0 0 chr2 44167818 44167945 -209088638 + FLAM_C SINE Alu 1 127 -6 884 277 127 22 chr2 44167945 44168538 -209088045 - L1MEd LINE L1 -1111 5018 4364 2051 136 0 7 chr2 44168562 44168857 -209087726 - AluJb SINE Alu -19 293 1 1793 148 54 3 chr2 44168882 44169179 -209087404 - AluSx SINE Alu 0 312 1 887 143 0 0 chr2 44169179 44169305 -209087278 - AluJo SINE Alu -176 136 11 601 300 61 32 chr2 44169316 44169693 -209086890 - L1MEd LINE L1 -2417 3712 3325 1947 140 3 3 chr2 44169860 44170152 -209086431 + AluSx SINE Alu 1 292 -20 461 250 98 83 chr2 44170666 44170857 -209085726 - L1MEd LINE L1 -2866 3263 3076 2151 116 0 17 chr2 44170857 44171020 -209085563 - AluSx SINE Alu -16 296 139 2468 70 3 0 chr2 44171020 44171320 -209085263 - AluY SINE Alu -10 301 1 2151 116 0 17 chr2 44171320 44171457 -209085126 - AluSx SINE Alu -173 139 1 461 250 98 83 chr2 44171457 44171639 -209084944 - L1MEd LINE L1 -3053 3076 2898 2153 125 3 3 chr2 44171639 44171934 -209084649 - AluSp SINE Alu -18 295 1 461 250 98 83 chr2 44171934 44171959 -209084624 - L1MEd LINE L1 -3231 2898 2875 2235 116 0 7 chr2 44171959 44172262 -209084321 + AluSg SINE Alu 1 301 -9 461 250 98 83 chr2 44172262 44172381 -209084202 - L1MEd LINE L1 -3254 2875 2736 1616 131 45 4 chr2 44172592 44172836 -209083747 - AluJb SINE Alu -12 300 47 7737 176 30 93 chr2 44172836 44174705 -209081878 + MER52A LTR ERV1 1 1753 -2 271 170 31 15 chr2 44174711 44174776 -209081807 - AluS SINE Alu -244 59 3 26 30 0 0 chr2 44174776 44174809 -209081774 + AT_rich Low_complexity Low_complexity 1 33 0 2131 130 16 3 chr2 44174836 44175144 -209081439 + AluJb SINE Alu 1 312 0 1995 257 45 30 chr2 44175413 44176074 -209080509 - L1MC4a LINE L1 -1841 5950 5280 692 300 56 40 chr2 44176285 44176900 -209079683 - L1MC4a LINE L1 -1071 5058 4430 2090 145 0 0 chr2 44176900 44177197 -209079386 - AluSx SINE Alu -15 297 1 692 300 56 40 chr2 44177197 44177238 -209079345 - L1MC4a LINE L1 -1699 4430 4391 415 284 80 56 chr2 44177895 44178145 -209078438 - L1MEd LINE L1 -3575 2554 2299 339 177 29 6 chr2 44178344 44178414 -209078169 - Alu SINE Alu -1 300 236 1167 156 0 127 chr2 44178422 44178697 -209077886 - AluJo SINE Alu -50 262 23 2595 96 25 3 chr2 44179000 44179365 -209077218 - THE1C LTR MaLR -2 373 1 26 0 0 0 chr2 44179521 44179547 -209077036 + AT_rich Low_complexity Low_complexity 1 26 0 499 283 112 51 chr2 44179562 44180530 -209076053 - L1MEd LINE L1 -839 1651 663 774 300 45 5 chr2 44180839 44181062 -209075521 + MLT1I LTR MaLR 164 395 -14 256 86 29 0 chr2 44181108 44181173 -209075410 + Alu SINE Alu 246 311 0 1872 133 104 129 chr2 44181177 44181327 -209075256 + L1MA6 LINE L1 5802 5954 -346 1673 138 3 57 chr2 44181327 44181610 -209074973 + AluSx SINE Alu 1 268 -44 1872 133 104 129 chr2 44181610 44181750 -209074833 + L1MA6 LINE L1 5954 6096 -204 651 205 25 0 chr2 44181750 44181872 -209074711 + FLAM_A SINE Alu 5 129 -4 1872 133 104 129 chr2 44181872 44181961 -209074622 + L1MA6 LINE L1 6096 6186 -114 1990 128 44 10 chr2 44181961 44182258 -209074325 + AluSx SINE Alu 1 307 -5 1872 133 104 129 chr2 44182258 44182365 -209074218 + L1MA6 LINE L1 6186 6278 -22 2095 122 21 0 chr2 44182383 44182671 -209073912 + AluSx SINE Alu 3 296 -16 1857 152 0 4 chr2 44182749 44183026 -209073557 - AluJb SINE Alu -26 286 11 2349 107 0 3 chr2 44183105 44183415 -209073168 + AluSg SINE Alu 1 309 -1 1131 126 27 27 chr2 44183427 44183800 -209072783 - L1MB4 LINE L1 -13 6167 5716 289 164 33 0 chr2 44184078 44184139 -209072444 - L1MB2 LINE L1 -3 6168 6106 2353 76 0 52 chr2 44184638 44184967 -209071616 - AluSx SINE Alu 0 312 1 2368 91 0 25 chr2 44185355 44185675 -209070908 + AluSq SINE Alu 1 312 -1 475 281 46 7 chr2 44185677 44185830 -209070753 + MIR SINE MIR 28 186 -76 2311 107 3 3 chr2 44185922 44186230 -209070353 + AluSq SINE Alu 1 308 -5 375 294 59 15 chr2 44186612 44186748 -209069835 - L2 LINE L2 -5 3308 3167 24 32 0 0 chr2 44186911 44186942 -209069641 + AT_rich Low_complexity Low_complexity 1 31 0 321 307 40 45 chr2 44187473 44187553 -209069030 + L1ME LINE L1 5461 5540 -581 1847 168 96 6 chr2 44187553 44187916 -209068667 + MSTD LTR MaLR 1 396 0 321 307 40 45 chr2 44187916 44188037 -209068546 + L1ME LINE L1 5540 5661 -460 1435 110 9 14 chr2 44190614 44190833 -209065750 + AluSg/x SINE Alu 85 302 -10 23 0 0 0 chr2 44191483 44191506 -209065077 + AT_rich Low_complexity Low_complexity 1 23 0 2032 126 3 7 chr2 44192740 44193034 -209063549 + AluJb SINE Alu 5 297 -15 2073 132 13 13 chr2 44193594 44193904 -209062679 + AluSx SINE Alu 3 312 0 2213 140 0 0 chr2 44194252 44194560 -209062023 + AluSx SINE Alu 2 309 -3 660 132 0 0 chr2 44194457 44194563 -209062020 + AluSg/x SINE Alu 205 310 0 359 197 14 0 chr2 44194929 44195000 -209061583 - ERVL LTR ERVL -2943 2821 2750 1639 186 0 4 chr2 44195499 44195768 -209060815 + AluJb SINE Alu 1 268 -44 441 0 0 0 chr2 44195778 44195827 -209060756 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 1608 199 9 22 chr2 44195882 44196198 -209060385 + AluJb SINE Alu 1 312 0 2081 132 14 3 chr2 44196242 44196538 -209060045 + AluSx SINE Alu 1 299 -13 2189 107 7 3 chr2 44197170 44197470 -209059113 + AluSx SINE Alu 1 301 -11 186 71 0 0 chr2 44198349 44198377 -209058206 + (A)n Simple_repeat Simple_repeat 1 28 0 1317 212 79 3 chr2 44198377 44198693 -209057890 + L1MB7 LINE L1 3951 4290 -1856 1489 158 31 73 chr2 44198693 44198871 -209057712 + MLT2B3 LTR ERVL 1 163 -391 2052 125 4 0 chr2 44198871 44199176 -209057407 + AluSx SINE Alu 1 306 0 1489 158 31 73 chr2 44199176 44199313 -209057270 + MLT2B3 LTR ERVL 163 304 -250 4529 151 72 114 chr2 44199314 44199584 -209056999 + L1MB7 LINE L1 4398 4678 -1506 1743 170 13 35 chr2 44199584 44199901 -209056682 + AluJo SINE Alu 1 310 -2 4529 151 72 114 chr2 44199901 44199986 -209056597 + L1MB7 LINE L1 4678 4765 -1419 889 99 0 0 chr2 44199986 44200107 -209056476 + AluSp/q SINE Alu 189 309 -4 4529 151 72 114 chr2 44200107 44200435 -209056148 + L1MB7 LINE L1 4765 5105 -1079 2313 92 0 16 chr2 44200435 44200739 -209055844 + AluSq SINE Alu 1 299 -14 4529 151 72 114 chr2 44200739 44201821 -209054762 + L1MB7 LINE L1 5105 6184 0 2267 124 0 0 chr2 44203070 44203377 -209053206 + AluSq SINE Alu 1 307 -6 478 100 14 0 chr2 44203607 44203677 -209052906 + FLAM SINE Alu 63 133 -10 33 66 0 0 chr2 44204619 44204680 -209051903 + AT_rich Low_complexity Low_complexity 1 61 0 1998 133 0 17 chr2 44204682 44204975 -209051608 - AluSx SINE Alu -23 289 2 195 129 0 0 chr2 44205001 44205032 -209051551 + (A)n Simple_repeat Simple_repeat 1 31 0 2251 97 14 0 chr2 44205066 44205356 -209051227 - AluSq SINE Alu -19 294 1 21 0 0 0 chr2 44205892 44205913 -209050670 + AT_rich Low_complexity Low_complexity 1 21 0 1698 175 7 30 chr2 44206512 44206815 -209049768 + AluJo SINE Alu 1 296 -16 385 211 16 0 chr2 44207116 44207239 -209049344 + (TA)n Simple_repeat Simple_repeat 2 126 0 181 288 30 0 chr2 44207856 44207922 -209048661 + MIR3 SINE MIR 110 177 -31 1836 162 0 22 chr2 44210193 44210507 -209046076 + AluJb SINE Alu 1 307 -5 2103 133 0 0 chr2 44211147 44211440 -209045143 - AluSx SINE Alu -19 293 1 2280 99 0 13 chr2 44211588 44211892 -209044691 - AluSx SINE Alu -12 300 1 24 0 0 0 chr2 44211910 44211934 -209044649 + AT_rich Low_complexity Low_complexity 1 24 0 688 153 0 2 chr2 44212272 44212508 -209044075 + AluJ SINE Alu 1 293 -19 233 237 0 0 chr2 44212679 44212738 -209043845 - L1MC4 LINE L1 -1339 6703 6645 * 1400 253 152 14 chr2 44212715 44212930 -209043653 - L1MC4 LINE L1 -1849 5959 5775 1664 156 3 75 chr2 44212930 44213237 -209043346 - AluJo SINE Alu -14 298 14 1400 253 152 14 chr2 44213237 44213582 -209043001 - L1MC4 LINE L1 -2033 5775 5322 376 267 11 0 chr2 44213708 44213758 -209042825 + MER58B DNA MER1_type 1 54 -287 378 0 0 0 chr2 44213758 44213800 -209042783 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 376 267 11 0 chr2 44213800 44213839 -209042744 + MER58B DNA MER1_type 54 91 -250 1183 185 8 48 chr2 44214007 44214121 -209042462 - MER8 DNA MER2_type 0 239 122 2373 58 41 3 chr2 44214121 44214415 -209042168 + AluYa5 SINE Alu 1 305 -6 1183 185 8 48 chr2 44214415 44214549 -209042034 - MER8 DNA MER2_type -117 122 1 1183 186 35 18 chr2 44214655 44214881 -209041702 + MER58B DNA MER1_type 79 308 -33 1302 117 0 0 chr2 44214924 44215095 -209041488 - AluSg/x SINE Alu -5 307 137 469 118 0 0 chr2 44215095 44215163 -209041420 - AluJ/FLAM SINE Alu -243 69 2 195 182 0 23 chr2 44215441 44215485 -209041098 + MIR3 SINE MIR 161 203 -5 536 250 21 26 chr2 44216075 44216259 -209040324 - MIR SINE MIR -39 223 45 2342 111 0 0 chr2 44216336 44216643 -209039940 + AluSx SINE Alu 1 307 -5 1664 131 0 105 chr2 44216710 44216856 -209039727 + AluJo SINE Alu 2 96 -218 2405 83 0 3 chr2 44216856 44217146 -209039437 + AluSx SINE Alu 1 289 -23 1664 131 0 105 chr2 44217146 44217345 -209039238 + AluJo SINE Alu 96 314 0 637 211 12 25 chr2 44217345 44217506 -209039077 + L1M4 LINE L1 5178 5336 -810 742 86 9 0 chr2 44217523 44217628 -209038955 - L1MA3 LINE L1 0 6305 6200 216 0 0 0 chr2 44217633 44217657 -209038926 + (TA)n Simple_repeat Simple_repeat 2 25 0 2205 90 49 0 chr2 44217767 44218055 -209038528 - AluSx SINE Alu -10 302 1 338 273 13 65 chr2 44218287 44218302 -209038281 - L2 LINE L2 0 3313 3299 1950 171 0 3 chr2 44218302 44218611 -209037972 - AluJb SINE Alu -4 308 1 338 273 13 65 chr2 44218611 44218749 -209037834 - L2 LINE L2 -14 3299 3168 2259 115 0 0 chr2 44218756 44219061 -209037522 + AluSx SINE Alu 1 305 -7 545 118 39 39 chr2 44219088 44219190 -209037393 - L1MC1 LINE L1 0 6333 6232 430 187 24 36 chr2 44219192 44219358 -209037225 + (TTATA)n Simple_repeat Simple_repeat 1 164 0 752 157 0 99 chr2 44219359 44219466 -209037117 - L1MC1 LINE L1 -94 6239 6154 1893 151 7 3 chr2 44219466 44219764 -209036819 + AluJo SINE Alu 1 299 -13 752 157 0 99 chr2 44219764 44219828 -209036755 - L1MC1 LINE L1 -179 6154 6085 424 250 0 62 chr2 44219885 44220013 -209036570 - L2 LINE L2 -255 3058 2939 1647 158 9 53 chr2 44220129 44220451 -209036132 - AluJb SINE Alu -4 308 1 1493 194 30 4 chr2 44220633 44220901 -209035682 + AluJo SINE Alu 1 275 -37 1521 198 14 7 chr2 44220906 44221189 -209035394 + AluJo SINE Alu 10 294 -18 1625 106 141 4 chr2 44221191 44221488 -209035095 + AluSx SINE Alu 1 332 0 22 56 0 0 chr2 44221605 44221641 -209034942 + AT_rich Low_complexity Low_complexity 1 36 0 1841 153 0 31 chr2 44221641 44221935 -209034648 - AluJo SINE Alu -27 285 1 661 174 58 97 chr2 44221940 44222033 -209034550 - L1MC5 LINE L1 -36 7925 7830 2242 109 14 0 chr2 44222033 44222327 -209034256 + AluSx SINE Alu 1 298 -14 661 174 58 97 chr2 44222327 44222440 -209034143 - L1MC5 LINE L1 -131 7830 7727 264 176 8 199 chr2 44222729 44222801 -209033782 + MIR SINE MIR 49 87 -175 2184 113 3 0 chr2 44222801 44223092 -209033491 - AluY SINE Alu -15 296 5 264 176 8 199 chr2 44223092 44223150 -209033433 + MIR SINE MIR 87 154 -108 800 161 8 0 chr2 44223411 44223541 -209033042 + FLAM_C SINE Alu 1 131 -2 1937 125 7 24 chr2 44223667 44223963 -209032620 + AluSx SINE Alu 1 291 -21 2192 107 3 19 chr2 44223976 44224286 -209032297 + AluSq SINE Alu 1 305 -8 709 209 0 8 chr2 44224342 44224476 -209032107 - FLAM_A SINE Alu 0 133 1 1094 107 6 24 chr2 44224486 44224654 -209031929 + LTR39 LTR ERV1 1 165 -618 4020 85 5 14 chr2 44224656 44225207 -209031376 + MER41A LTR ERV1 3 548 -6 1187 103 5 33 chr2 44225207 44225391 -209031192 - AluSg/x SINE Alu 0 310 132 2260 108 7 0 chr2 44225391 44225688 -209030895 - AluSq SINE Alu -14 299 1 3439 138 32 81 chr2 44225712 44226218 -209030365 + LTR39 LTR ERV1 164 632 -151 2051 124 0 14 chr2 44226218 44226509 -209030074 - AluSx SINE Alu -25 287 1 3439 138 32 81 chr2 44226509 44226653 -209029930 + LTR39 LTR ERV1 632 782 -1 1016 204 139 118 chr2 44226740 44227095 -209029488 + MER34B LTR ERV1 1 374 -191 2411 77 0 0 chr2 44227095 44227393 -209029190 + AluY SINE Alu 1 298 -13 1016 204 139 118 chr2 44227393 44227590 -209028993 + MER34B LTR ERV1 374 565 0 1751 123 95 25 chr2 44227651 44227796 -209028787 - AluSx SINE Alu -7 305 172 2175 106 3 0 chr2 44227796 44228078 -209028505 - AluSx SINE Alu -20 292 10 1751 123 95 25 chr2 44228078 44228217 -209028366 - AluSx SINE Alu -140 172 1 298 87 22 0 chr2 44228251 44228297 -209028286 - L1MA10 LINE L1 -7 6327 6281 2380 100 0 0 chr2 44228493 44228794 -209027789 - AluSg SINE Alu -9 301 1 223 255 112 31 chr2 44228813 44228911 -209027672 - L2 LINE L2 -7 3306 3201 620 279 159 21 chr2 44228988 44229372 -209027211 - L2 LINE L2 -339 2975 2539 2407 71 0 14 chr2 44229924 44230221 -209026362 + AluY SINE Alu 2 294 -17 260 314 23 0 chr2 44231076 44231162 -209025421 + (CATATA)n Simple_repeat Simple_repeat 1 88 0 403 277 13 67 chr2 44231163 44231181 -209025402 - L1MC4a LINE L1 -1849 5959 5942 2373 100 3 0 chr2 44231181 44231491 -209025092 - AluSx SINE Alu -1 311 1 403 277 13 67 chr2 44231491 44231588 -209024995 - L1MC4a LINE L1 -1866 5942 5859 1914 146 30 3 chr2 44231588 44231883 -209024700 + AluJo SINE Alu 2 304 -8 403 277 13 67 chr2 44231883 44231990 -209024593 - L1MC4a LINE L1 -1949 5859 5748 222 314 116 0 chr2 44232032 44232153 -209024430 - MIR SINE MIR -59 203 69 381 287 39 44 chr2 44232202 44232383 -209024200 - L1MC4a LINE L1 -2066 5742 5563 1793 195 0 0 chr2 44232528 44232831 -209023752 - AluJb SINE Alu -9 303 1 460 110 268 0 chr2 44232834 44232916 -209023667 - L1MB7 LINE L1 -10 6174 6071 2191 106 0 20 chr2 44232925 44233227 -209023356 - AluSg SINE Alu -14 296 1 885 166 7 0 chr2 44233231 44233370 -209023213 - AluJo SINE Alu -169 143 4 509 194 39 10 chr2 44233431 44233534 -209023049 - L2 LINE L2 0 3313 3208 693 162 0 0 chr2 44233568 44233673 -209022910 + FLAM_A SINE Alu 22 126 -16 373 270 92 79 chr2 44233727 44234229 -209022354 - L2 LINE L2 -168 3145 2626 367 198 0 58 chr2 44234503 44234589 -209021994 + MER58B DNA MER1_type 3 83 -258 2222 110 10 0 chr2 44234589 44234881 -209021702 + AluSx SINE Alu 1 295 -17 493 204 28 0 chr2 44234885 44234993 -209021590 - FLAM_A SINE Alu 0 142 32 1667 129 19 4 chr2 44234993 44235256 -209021327 + MER58B DNA MER1_type 75 341 0 312 253 55 0 chr2 44235294 44235385 -209021198 + MIR SINE MIR 65 160 -102 2113 124 0 22 chr2 44235623 44235938 -209020645 - AluSx SINE Alu -1 311 4 1863 169 3 10 chr2 44235995 44236308 -209020275 - AluJo SINE Alu -1 311 1 1124 133 93 49 chr2 44236542 44236768 -209019815 + MER46A DNA MER2_type 1 236 0 1872 154 18 0 chr2 44237139 44237424 -209019159 + AluJb SINE Alu 1 290 -22 582 167 44 9 chr2 44237430 44237544 -209019039 + Charlie1 DNA MER1_type 2640 2757 -4 836 259 57 4 chr2 44237544 44237772 -209018811 + Charlie2 DNA MER1_type 74 313 -2469 2121 139 0 0 chr2 44237785 44238073 -209018510 - AluSx SINE Alu -24 288 1 1142 52 0 0 chr2 44238107 44238242 -209018341 + AluY SINE Alu 165 299 -12 315 0 0 0 chr2 44238246 44238281 -209018302 + (TG)n Simple_repeat Simple_repeat 2 36 0 233 196 0 0 chr2 44238281 44238327 -209018256 + L1MC4 LINE L1 6658 6703 -1339 1280 256 164 26 chr2 44238489 44239115 -209017468 + L1MC4a LINE L1 5352 6064 -1744 904 145 14 0 chr2 44239362 44239507 -209017076 - FRAM SINE Alu -10 166 20 2460 88 0 0 chr2 44239530 44239837 -209016746 - AluSx SINE Alu -5 307 1 722 185 0 0 chr2 44240000 44240119 -209016464 + AluJo SINE Alu 1 119 -193 575 77 13 0 chr2 44240114 44240192 -209016391 - AluSg1 SINE Alu -229 80 2 * 978 215 5 5 chr2 44240194 44240403 -209016180 + AluJo SINE Alu 102 310 -2 1071 85 0 0 chr2 44241280 44241410 -209015173 + AluSp SINE Alu 1 130 -183 207 0 0 0 chr2 44241410 44241433 -209015150 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 209 48 16 111 chr2 44243739 44243802 -209012781 + (CGGGA)n Simple_repeat Simple_repeat 3 59 0 196 188 62 0 chr2 44247526 44247574 -209009009 - L3b LINE CR1 0 1583 1533 180 0 0 0 chr2 44247587 44247607 -209008976 + (A)n Simple_repeat Simple_repeat 1 20 0 199 338 29 29 chr2 44247756 44247895 -209008688 + L2 LINE L2 2605 2743 -571 2014 106 6 40 chr2 44247902 44248223 -209008360 + AluSq SINE Alu 1 310 -3 2265 81 0 0 chr2 44248283 44248578 -209008005 + AluSg SINE Alu 1 295 -15 469 283 49 34 chr2 44248599 44248804 -209007779 + MIR SINE MIR 44 251 -11 3233 153 114 2 chr2 44249335 44249938 -209006645 - LTR51 LTR ERV1 0 671 1 678 172 15 22 chr2 44250016 44250150 -209006433 + L1MA9 LINE L1 6005 6137 -175 1599 68 10 0 chr2 44250150 44250356 -209006227 - AluSp SINE Alu -17 296 89 2004 114 7 0 chr2 44250651 44250952 -209005631 + AluSq SINE Alu 2 304 0 2307 81 3 0 chr2 44250952 44251262 -209005321 + AluY SINE Alu 1 311 0 25 0 0 0 chr2 44251262 44251287 -209005296 + AT_rich Low_complexity Low_complexity 1 25 0 270 106 0 0 chr2 44251333 44251380 -209005203 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 2027 138 3 0 chr2 44253146 44253450 -209003133 + AluSx SINE Alu 1 305 -7 1832 137 20 17 chr2 44253595 44253895 -209002688 - AluSx SINE Alu -11 301 1 1719 169 7 10 chr2 44253897 44254205 -209002378 - AluJo SINE Alu -5 307 1 2118 91 0 7 chr2 44254243 44254573 -209002010 - AluSx SINE Alu 0 328 1 651 209 35 0 chr2 44254575 44254690 -209001893 - FLAM_A SINE Alu -16 126 8 189 0 0 0 chr2 44254704 44254725 -209001858 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 2112 101 3 0 chr2 44254728 44255014 -209001569 - AluSg SINE Alu -23 287 1 1232 67 0 18 chr2 44255023 44255234 -209001349 - AluY SINE Alu 0 328 121 1419 72 10 16 chr2 44255234 44255428 -209001155 - AluY SINE Alu -117 194 2 835 158 8 0 chr2 44256058 44256191 -209000392 + AluJo SINE Alu 2 135 -177 2085 118 0 0 chr2 44256192 44256498 -209000085 + AluSq SINE Alu 1 306 -7 2080 123 0 3 chr2 44256504 44256806 -208999777 + AluSq SINE Alu 1 301 -12 1912 113 53 10 chr2 44256809 44257109 -208999474 + AluSq SINE Alu 1 313 0 2084 100 20 3 chr2 44257118 44257419 -208999164 + AluSx SINE Alu 1 306 -6 4233 135 31 33 chr2 44257436 44257909 -208998674 + L1MC3 LINE L1 6706 7178 -607 1585 168 40 0 chr2 44257909 44258183 -208998400 + AluJo SINE Alu 1 285 -27 558 0 0 0 chr2 44258183 44258245 -208998338 + (CA)n Simple_repeat Simple_repeat 2 63 0 4233 135 31 33 chr2 44258245 44258538 -208998045 + L1MC3 LINE L1 7176 7472 -313 2096 122 0 0 chr2 44258538 44258841 -208997742 + AluSx SINE Alu 1 303 -9 628 160 76 8 chr2 44258843 44258962 -208997621 + FLAM_A SINE Alu 1 127 -6 1573 179 28 0 chr2 44258982 44259273 -208997310 + AluSq SINE Alu 1 299 -14 219 323 97 21 chr2 44259394 44259580 -208997003 + L2 LINE L2 2170 2369 -945 1768 142 54 3 chr2 44259785 44260080 -208996503 - AluJo SINE Alu -2 310 1 1931 181 133 29 chr2 44260272 44260725 -208995858 + MLT1F1 LTR MaLR 67 566 -1 2170 119 3 0 chr2 44260958 44261268 -208995315 - AluSx SINE Alu -1 311 1 1200 156 0 15 chr2 44261734 44261933 -208994650 + AluJo SINE Alu 7 202 -110 249 108 0 0 chr2 44261969 44262006 -208994577 + (GGAA)n Simple_repeat Simple_repeat 3 39 0 1788 158 3 7 chr2 44262021 44262324 -208994259 - AluJo SINE Alu -10 302 1 255 271 105 64 chr2 44262443 44262842 -208993741 + MLT1J LTR MaLR 13 425 -21 1684 147 3 18 chr2 44262845 44263160 -208993423 + AluJb SINE Alu 1 311 0 1921 97 0 75 chr2 44263519 44263838 -208992745 - AluY SINE Alu -16 295 1 1247 45 0 0 chr2 44264172 44264329 -208992254 - L1PA4 LINE L1 0 6155 5999 1686 135 7 17 chr2 44264398 44264687 -208991896 - AluSq SINE Alu 0 313 28 907 66 22 44 chr2 44264690 44264873 -208991710 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 1657 173 0 10 chr2 44264873 44265174 -208991409 - AluSx SINE Alu -14 298 1 782 165 0 15 chr2 44265443 44265576 -208991007 - FLAM_A SINE Alu 0 133 3 386 241 25 86 chr2 44265834 44265908 -208990675 - L2 LINE L2 -1 3312 3252 2633 129 20 67 chr2 44265908 44265988 -208990595 + MER101 LTR ERV1 2 84 -390 2232 109 0 0 chr2 44265988 44266292 -208990291 + AluSc SINE Alu 1 304 -5 2633 129 20 67 chr2 44266292 44266707 -208989876 + MER101 LTR ERV1 84 474 0 386 241 25 86 chr2 44266707 44266794 -208989789 - L2 LINE L2 -61 3252 3161 294 67 0 44 chr2 44266807 44266852 -208989731 + L1MC3 LINE L1 7409 7451 -334 31 0 0 0 chr2 44266858 44266889 -208989694 + AT_rich Low_complexity Low_complexity 1 31 0 568 277 8 0 chr2 44266926 44267056 -208989527 + FLAM_A SINE Alu 3 133 0 2063 115 0 13 chr2 44267134 44267439 -208989144 - AluY SINE Alu -10 301 1 2121 100 3 0 chr2 44267442 44267732 -208988851 - AluSx SINE Alu -19 293 3 443 268 27 18 chr2 44267802 44267914 -208988669 + MIR SINE MIR 20 132 -130 2030 155 69 3 chr2 44267949 44268324 -208988259 - MER57A LTR ERV1 0 403 4 2190 69 14 0 chr2 44269120 44269411 -208987172 + AluSq SINE Alu 1 295 -18 1376 85 16 0 chr2 44269427 44269615 -208986968 + AluY SINE Alu 6 196 -115 198 0 0 0 chr2 44270028 44270050 -208986533 + (TA)n Simple_repeat Simple_repeat 2 23 0 520 174 0 43 chr2 44270050 44270142 -208986441 - FRAM SINE Alu -15 161 74 6408 107 8 28 chr2 44270143 44270576 -208986007 - L1MA2 LINE L1 -113 6191 5751 234 0 0 0 chr2 44270576 44270602 -208985981 + (TG)n Simple_repeat Simple_repeat 2 27 0 1951 127 3 0 chr2 44270602 44270886 -208985697 - AluSx SINE Alu -27 285 1 6408 107 8 28 chr2 44270886 44271771 -208984812 - L1MA2 LINE L1 -551 5753 4892 3442 170 89 36 chr2 44271770 44272234 -208984349 + L1MB2 LINE L1 5323 5848 -323 * 2140 103 23 0 chr2 44272234 44272536 -208984047 + AluSx SINE Alu 1 309 -3 3442 170 89 36 chr2 44272536 44272871 -208983712 + L1MB2 LINE L1 5848 6164 -7 282 288 0 0 chr2 44272890 44272949 -208983634 - tRNA-Leu-CTT tRNA tRNA -5 80 22 559 148 222 9 chr2 44272962 44273070 -208983513 - FLAM_C SINE Alu -11 132 2 1288 196 22 53 chr2 44273283 44273604 -208982979 + AluJo SINE Alu 1 311 -1 233 223 20 54 chr2 44273702 44273850 -208982733 + (TATAA)n Simple_repeat Simple_repeat 3 145 0 1454 165 55 24 chr2 44274044 44274335 -208982248 + AluJb SINE Alu 1 300 -12 557 237 40 50 chr2 44274846 44275007 -208981576 - MIR SINE MIR 0 262 102 1503 184 10 33 chr2 44275007 44275312 -208981271 + AluJb SINE Alu 1 298 -14 557 237 40 50 chr2 44275312 44275348 -208981235 - MIR SINE MIR -160 102 67 472 98 0 0 chr2 44275370 44275431 -208981152 + Alu SINE Alu 2 62 -247 378 0 0 0 chr2 44275432 44275474 -208981109 + (CA)n Simple_repeat Simple_repeat 1 42 0 944 156 12 0 chr2 44275476 44275636 -208980947 + FRAM SINE Alu 1 162 -14 619 198 9 18 chr2 44275644 44275755 -208980828 + FLAM_A SINE Alu 1 110 -32 2026 85 3 11 chr2 44276737 44277019 -208979564 + AluSq SINE Alu 19 298 -15 226 274 86 8 chr2 44277048 44277165 -208979418 - L1MC5 LINE L1 -79 7882 7757 440 182 8 83 chr2 44277477 44277499 -208979084 + L1MD3 LINE L1 7871 7893 -102 2308 84 0 0 chr2 44277499 44277798 -208978785 + AluY SINE Alu 1 299 -12 440 182 8 83 chr2 44277798 44277886 -208978697 + L1MD3 LINE L1 7893 7974 -21 1358 187 52 4 chr2 44277886 44278154 -208978429 + AluJo SINE Alu 1 281 -31 26 64 0 0 chr2 44278172 44278219 -208978364 + AT_rich Low_complexity Low_complexity 1 47 0 188 360 0 40 chr2 44278350 44278425 -208978158 - L2 LINE L2 -185 3087 3016 2275 103 0 0 chr2 44278684 44278995 -208977588 + AluY SINE Alu 1 311 0 1912 117 58 0 chr2 44280221 44280512 -208976071 + AluSx SINE Alu 1 308 -4 611 148 0 10 chr2 44282070 44282171 -208974412 - AluJ/FLAM SINE Alu -211 101 2 187 298 0 0 chr2 44282516 44282563 -208974020 + L2 LINE L2 3006 3052 -261 1146 217 52 72 chr2 44282911 44283010 -208973573 + L1ME LINE L1 4958 5057 -1107 2082 135 0 0 chr2 44283010 44283321 -208973262 - AluJb SINE Alu -1 311 1 1146 217 52 72 chr2 44283321 44283799 -208972784 + L1ME LINE L1 5057 5531 -633 1673 144 65 82 chr2 44283799 44283928 -208972655 + MER7A DNA MER2_type 1 131 -2907 2091 123 0 7 chr2 44283928 44284237 -208972346 + AluSx SINE Alu 1 307 -5 1673 144 65 82 chr2 44284237 44284461 -208972122 + MER7A DNA MER2_type 131 346 0 1146 217 52 72 chr2 44284461 44284488 -208972095 + L1ME LINE L1 5531 5557 -607 370 162 0 15 chr2 44284488 44284556 -208972027 - MADE1 DNA Mariner -1 79 13 2355 70 0 0 chr2 44284558 44284857 -208971726 - AluSx SINE Alu -13 299 1 541 287 45 73 chr2 44284870 44285190 -208971393 + L1ME LINE L1 3329 3656 -2490 2227 104 0 0 chr2 44285190 44285488 -208971095 + AluSx SINE Alu 1 298 -14 1764 157 3 7 chr2 44285498 44285791 -208970792 + AluJb SINE Alu 7 298 -14 541 287 45 73 chr2 44285791 44285922 -208970661 + L1ME LINE L1 3665 3778 -2368 324 291 164 0 chr2 44285931 44286065 -208970518 + L1ME LINE L1 4077 4232 -1914 276 274 0 0 chr2 44286111 44286184 -208970399 - Tigger5 DNA MER2_type 0 2323 2251 * 277 208 0 0 chr2 44286154 44286207 -208970376 - Tigger5 DNA MER2_type -2269 54 2 542 261 72 80 chr2 44286221 44286477 -208970106 + L1ME LINE L1 4303 4559 -1587 2187 104 0 7 chr2 44286477 44286786 -208969797 + AluSg1 SINE Alu 1 307 -2 542 261 72 80 chr2 44286786 44286941 -208969642 + L1ME LINE L1 4559 4714 -1432 2123 107 0 0 chr2 44286941 44287239 -208969344 + AluSg SINE Alu 1 298 -12 542 261 72 80 chr2 44287239 44287601 -208968982 + L1ME LINE L1 4714 5174 -972 24 32 0 0 chr2 44288091 44288122 -208968461 + AT_rich Low_complexity Low_complexity 1 31 0 506 223 89 0 chr2 44288194 44288306 -208968277 + FLAM_C SINE Alu 1 122 -21 21 0 0 0 chr2 44288306 44288327 -208968256 + AT_rich Low_complexity Low_complexity 1 21 0 1589 152 70 4 chr2 44288403 44288673 -208967910 + AluJo SINE Alu 7 294 -18 1575 160 32 7 chr2 44288679 44288960 -208967623 + AluJo SINE Alu 1 288 -24 270 0 0 0 chr2 44288960 44288990 -208967593 + (TG)n Simple_repeat Simple_repeat 2 31 0 2224 166 111 2 chr2 44288998 44289467 -208967116 + L1MB7 LINE L1 5665 6184 0 236 160 93 40 chr2 44289463 44289538 -208967045 + L1ME LINE L1 5814 5892 -272 * 962 181 0 11 chr2 44289542 44289719 -208966864 + AluJb SINE Alu 137 311 -1 630 328 48 0 chr2 44289736 44290038 -208966545 + L1ME LINE L1 5447 5777 -385 1753 138 4 4 chr2 44290308 44290584 -208965999 - AluSx SINE Alu -16 296 21 386 169 8 0 chr2 44290590 44290708 -208965875 + (TA)n Simple_repeat Simple_repeat 2 120 0 2329 62 17 0 chr2 44290708 44291000 -208965583 - AluY SINE Alu -14 297 1 2103 101 7 0 chr2 44291148 44291444 -208965139 - AluSx SINE Alu -4 308 11 1834 91 0 0 chr2 44291674 44291916 -208964667 + AluSx SINE Alu 1 242 -70 2201 98 3 0 chr2 44292050 44292346 -208964237 + AluSx SINE Alu 1 297 -15 305 179 179 21 chr2 44292366 44292511 -208964072 - Charlie2 DNA MER1_type -202 2660 2493 252 196 186 82 chr2 44292765 44292862 -208963721 + L2 LINE L2 3161 3267 -5 300 162 114 48 chr2 44292887 44292992 -208963591 - Charlie2 DNA MER1_type -351 2511 2400 813 154 8 0 chr2 44293005 44293128 -208963455 + FRAM SINE Alu 23 146 -30 988 91 0 21 chr2 44293128 44293271 -208963312 - AluSg/x SINE Alu -10 302 163 1942 149 0 0 chr2 44293375 44293671 -208962912 - AluSx SINE Alu -16 296 1 406 250 83 15 chr2 44293715 44293847 -208962736 + MLT1A1 LTR MaLR 225 365 0 2208 108 0 0 chr2 44293987 44294292 -208962291 - AluSg SINE Alu -5 305 1 2347 78 0 0 chr2 44294302 44294597 -208961986 - AluY SINE Alu -16 295 1 1868 155 3 0 chr2 44294770 44295073 -208961510 + AluSx SINE Alu 1 304 -8 2082 78 36 39 chr2 44295622 44295930 -208960653 - AluSq SINE Alu -6 307 1 251 73 49 0 chr2 44296030 44296071 -208960512 + T-rich Low_complexity Low_complexity 2 44 0 301 117 0 100 chr2 44296071 44296093 -208960490 - MER41A LTR ERV1 -101 453 430 2358 68 3 0 chr2 44296093 44296401 -208960182 + AluY SINE Alu 1 309 -2 301 117 0 100 chr2 44296401 44296438 -208960145 - MER41A LTR ERV1 -124 430 400 236 233 27 0 chr2 44296439 44296512 -208960071 + Charlie5 DNA MER1_type 2491 2565 -47 2026 105 26 3 chr2 44296856 44297161 -208959422 + AluSq SINE Alu 1 312 -1 250 186 0 0 chr2 44297176 44297235 -208959348 - MLT1J LTR MaLR -37 474 416 359 189 0 27 chr2 44297245 44297319 -208959264 + MLT1J LTR MaLR 426 497 -14 790 158 8 0 chr2 44297337 44297464 -208959119 - FLAM_C SINE Alu -5 128 1 282 228 109 20 chr2 44297471 44297572 -208959011 + MLT1J LTR MaLR 278 387 -124 2258 87 7 0 chr2 44297646 44297944 -208958639 + AluSx SINE Alu 1 300 -12 518 167 250 0 chr2 44297960 44298068 -208958515 - AluJb SINE Alu -177 135 1 620 249 50 13 chr2 44298073 44298272 -208958311 - MLT1J LTR MaLR -292 219 18 1695 169 7 3 chr2 44298378 44298674 -208957909 + AluJo SINE Alu 1 297 -15 2228 112 0 3 chr2 44298733 44299046 -208957537 + AluSp SINE Alu 1 312 -1 2446 60 0 0 chr2 44299119 44299419 -208957164 + AluY SINE Alu 1 300 -11 935 274 43 87 chr2 44299708 44299823 -208956760 + L1MC4 LINE L1 7449 7567 -475 2221 109 0 3 chr2 44299823 44300136 -208956447 + AluSq SINE Alu 1 312 -1 935 274 43 87 chr2 44300136 44300492 -208956091 + L1MC4 LINE L1 7567 7889 -153 2254 83 0 3 chr2 44300492 44300793 -208955790 + AluY SINE Alu 1 300 -11 935 274 43 87 chr2 44300793 44300941 -208955642 + L1MC4 LINE L1 7889 8042 0 2091 121 0 9 chr2 44300967 44301282 -208955301 + AluSx SINE Alu 1 312 0 2596 29 6 0 chr2 44301300 44301613 -208954970 - AluYb8 SINE Alu -3 315 1 2529 91 27 19 chr2 44301735 44302107 -208954476 - THE1C LTR MaLR 0 375 1 1783 143 34 3 chr2 44302117 44302410 -208954173 - AluJo SINE Alu -8 304 3 1764 148 10 7 chr2 44302710 44303000 -208953583 - AluJo SINE Alu -10 302 12 1975 149 0 3 chr2 44303092 44303401 -208953182 + AluJo SINE Alu 1 308 -4 1734 153 60 131 chr2 44303477 44303572 -208953011 + MER47B DNA MER2_type 1 101 -2222 2300 74 7 0 chr2 44303572 44303870 -208952713 - AluSp SINE Alu -13 300 1 1734 153 60 131 chr2 44303870 44304224 -208952359 + MER47B DNA MER2_type 101 418 0 374 80 0 0 chr2 44304940 44304990 -208951593 - MLT2A1 LTR ERVL 0 444 395 598 169 77 87 chr2 44304991 44305495 -208951088 - Ricksha DNA DNA -1668 378 186 920 72 12 90 chr2 44305025 44305085 -208951498 - HERVL LTR ERVL -1 5653 5590 1905 128 0 17 chr2 44305085 44305396 -208951187 - AluSx SINE Alu 0 306 1 920 72 12 90 chr2 44305396 44305501 -208951082 - HERVL LTR ERVL -64 5590 5500 1395 147 5 5 chr2 44305502 44305720 -208950863 - LTR26E LTR ERV1 -129 493 276 2200 95 0 0 chr2 44305720 44306015 -208950568 - AluSg SINE Alu -15 295 1 1321 174 46 49 chr2 44306020 44306325 -208950258 - AluJo SINE Alu -8 304 1 21 0 0 0 chr2 44306369 44306390 -208950193 + AT_rich Low_complexity Low_complexity 1 21 0 458 148 0 34 chr2 44306390 44306478 -208950105 - FLAM_A SINE Alu -6 136 52 1349 145 14 82 chr2 44306478 44306705 -208949878 + MER41D LTR ERV1 3 209 -348 2147 114 0 19 chr2 44306705 44307021 -208949562 + AluSg SINE Alu 1 310 0 1349 145 14 82 chr2 44307021 44307075 -208949508 + MER41D LTR ERV1 209 265 -292 709 128 14 108 chr2 44307077 44307225 -208949358 - FLAM_C SINE Alu -8 135 2 1375 99 10 15 chr2 44307261 44307463 -208949120 - LTR26B LTR ERV1 -330 201 1 2040 146 0 0 chr2 44307637 44307946 -208948637 + AluJb SINE Alu 3 311 -1 251 245 277 0 chr2 44308129 44308223 -208948360 + MIR SINE MIR 125 244 -18 375 240 58 10 chr2 44309606 44309710 -208946873 - MER5A DNA MER1_type -37 152 44 2063 113 80 28 chr2 44309714 44309880 -208946703 - MER57B LTR ERV1 -51 383 227 2008 101 0 10 chr2 44309880 44310168 -208946415 - AluSx SINE Alu -25 287 3 2063 113 80 28 chr2 44310168 44310364 -208946219 - MER57B LTR ERV1 -207 227 2 1072 115 0 0 chr2 44310395 44310543 -208946040 - MER57B LTR ERV1 -284 150 3 335 219 123 0 chr2 44310649 44310722 -208945861 + MER44D DNA MER2_type 1 82 -623 1839 139 0 3 chr2 44310722 44311009 -208945574 + AluSx SINE Alu 1 286 -26 1743 143 0 36 chr2 44311049 44311350 -208945233 + AluJb SINE Alu 1 290 -22 578 0 49 0 chr2 44311350 44311432 -208945151 + (TA)n Simple_repeat Simple_repeat 2 87 0 2132 85 7 0 chr2 44311435 44311717 -208944866 + AluSp SINE Alu 4 287 -26 314 226 19 85 chr2 44311724 44311830 -208944753 + L1MCa LINE L1 1980 2078 -4348 312 206 10 93 chr2 44311820 44311917 -208944666 + L1MC4 LINE L1 6612 6700 -1342 * 190 81 54 0 chr2 44311919 44311956 -208944627 + (TA)n Simple_repeat Simple_repeat 1 39 0 312 270 28 107 chr2 44311956 44312171 -208944412 + L1ME4a LINE L1 5767 5964 -157 * 336 156 101 83 chr2 44312163 44312272 -208944311 - L1MCa LINE L1 -4362 2064 1954 3991 143 16 51 chr2 44312276 44312962 -208943621 + MER44D DNA MER2_type 72 605 0 1915 105 3 31 chr2 44313299 44313585 -208942998 + AluSx SINE Alu 1 278 -34 369 0 0 0 chr2 44313587 44313628 -208942955 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 1994 144 0 0 chr2 44313718 44314024 -208942559 - AluSx SINE Alu 0 312 7 665 275 100 32 chr2 44314030 44314281 -208942302 - L2 LINE L2 -18 3295 3028 2091 74 42 3 chr2 44314281 44314565 -208942018 - AluSc SINE Alu -14 295 1 633 135 10 0 chr2 44314567 44314663 -208941920 - AluJo/FLAM SINE Alu -181 131 35 368 188 125 62 chr2 44314707 44314835 -208941748 - L2 LINE L2 -361 2952 2817 657 216 12 36 chr2 44315015 44315182 -208941401 + FRAM SINE Alu 4 166 0 2167 96 0 16 chr2 44315209 44315522 -208941061 + AluSc SINE Alu 1 308 -1 1284 181 39 62 chr2 44315534 44315683 -208940900 + AluJo SINE Alu 1 152 -203 2334 58 3 0 chr2 44315683 44315978 -208940605 + AluY SINE Alu 1 296 -15 1284 181 39 62 chr2 44315978 44315993 -208940590 + AluJo SINE Alu 152 166 -189 2243 88 3 0 chr2 44315993 44316287 -208940296 + AluSp SINE Alu 1 295 -18 1284 181 39 62 chr2 44316287 44316483 -208940100 + AluJo SINE Alu 166 355 0 2130 116 0 0 chr2 44316494 44316795 -208939788 + AluSx SINE Alu 4 304 -8 1505 121 0 13 chr2 44317445 44317677 -208938906 + AluSq SINE Alu 38 266 -47 2224 81 30 0 chr2 44317721 44318017 -208938566 + AluSp SINE Alu 1 305 -8 2198 90 0 26 chr2 44318018 44318329 -208938254 + AluY SINE Alu 1 303 -8 2108 107 0 0 chr2 44318329 44318655 -208937928 + AluSx SINE Alu 1 326 0 884 98 0 0 chr2 44319637 44319760 -208936823 + AluSg/x SINE Alu 138 260 -52 478 75 0 85 chr2 44319762 44319856 -208936727 + Alu SINE Alu 226 311 0 854 268 38 55 chr2 44320619 44320736 -208935847 + L2 LINE L2 1996 2114 -1200 361 206 123 112 chr2 44320736 44320778 -208935805 + MER5B DNA MER1_type 4 44 -134 2035 100 10 35 chr2 44320778 44321089 -208935494 - AluSp SINE Alu -10 303 1 1773 115 27 24 chr2 44321099 44321394 -208935189 - AluSx SINE Alu -16 296 1 361 206 123 112 chr2 44321394 44321510 -208935073 + MER5B DNA MER1_type 52 175 -3 854 268 38 55 chr2 44321510 44321735 -208934848 + L2 LINE L2 2114 2332 -982 2235 100 0 0 chr2 44321759 44322059 -208934524 + AluSx SINE Alu 1 300 -12 335 320 112 34 chr2 44322072 44322136 -208934447 + L2 LINE L2 2480 2538 -776 2069 79 9 70 chr2 44322136 44322452 -208934131 + AluSp SINE Alu 1 297 -16 335 320 112 34 chr2 44322452 44322593 -208933990 + L2 LINE L2 2538 2701 -613 27 0 0 0 chr2 44322593 44322620 -208933963 + AT_rich Low_complexity Low_complexity 1 27 0 1346 103 61 5 chr2 44322636 44322849 -208933734 - AluSx SINE Alu -87 225 1 1327 108 5 0 chr2 44323001 44323187 -208933396 + AluSg/x SINE Alu 114 300 -12 242 262 0 16 chr2 44323200 44323261 -208933322 + L2 LINE L2 2480 2539 -775 644 106 0 4 chr2 44323265 44323501 -208933082 + AluSx SINE Alu 2 324 0 1986 119 0 7 chr2 44323533 44323828 -208932755 + AluSx SINE Alu 6 298 -14 500 316 140 7 chr2 44323844 44324146 -208932437 + L2 LINE L2 2722 3059 -254 2341 90 0 0 chr2 44324218 44324528 -208932055 - AluSx SINE Alu -2 310 1 1443 205 115 41 chr2 44324791 44325226 -208931357 - MLT1C LTR MaLR 0 467 1 327 285 157 48 chr2 44325676 44326136 -208930447 + L2 LINE L2 2243 2752 -562 1518 109 38 0 chr2 44326149 44326360 -208930223 - AluSx SINE Alu -87 225 7 2098 113 3 0 chr2 44326370 44326671 -208929912 - AluY SINE Alu -9 302 1 537 16 0 0 chr2 44326682 44326744 -208929839 + (TTCC)n Simple_repeat Simple_repeat 3 64 0 2029 86 14 4 chr2 44326748 44327026 -208929557 - AluSq SINE Alu -32 281 1 2151 102 0 3 chr2 44327688 44327981 -208928602 - AluSg SINE Alu -18 292 1 1386 167 92 27 chr2 44328080 44328373 -208928210 - AluJb SINE Alu 0 312 1 395 275 92 44 chr2 44328570 44328628 -208927955 - MIR SINE MIR -8 254 200 2037 108 3 17 chr2 44328628 44328923 -208927660 + AluSq SINE Alu 1 291 -22 395 275 92 44 chr2 44328923 44329093 -208927490 - MIR SINE MIR -62 200 15 199 271 76 76 chr2 44329744 44329862 -208926721 + MIR SINE MIR 8 125 -137 294 236 104 19 chr2 44330106 44330212 -208926371 - MIR SINE MIR -50 212 98 23 0 0 0 chr2 44330221 44330244 -208926339 + AT_rich Low_complexity Low_complexity 1 23 0 27 62 0 0 chr2 44331595 44331643 -208924940 + GC_rich Low_complexity Low_complexity 1 48 0 204 40 0 0 chr2 44332084 44332109 -208924474 + (TGGGGG)n Simple_repeat Simple_repeat 3 27 0 29 0 0 0 chr2 44333417 44333446 -208923137 + AT_rich Low_complexity Low_complexity 1 29 0 684 155 9 0 chr2 44333473 44333589 -208922994 + FLAM_C SINE Alu 1 117 -16 28 29 0 0 chr2 44333589 44333624 -208922959 + AT_rich Low_complexity Low_complexity 1 35 0 2258 87 6 6 chr2 44333624 44333936 -208922647 + AluSp SINE Alu 1 312 -1 1961 103 40 20 chr2 44334006 44334306 -208922277 + AluSx SINE Alu 1 306 -6 2304 81 3 0 chr2 44334561 44334858 -208921725 + AluSp SINE Alu 1 298 -15 2199 76 7 7 chr2 44334891 44335182 -208921401 + AluY SINE Alu 1 291 -20 1519 170 54 0 chr2 44335205 44335481 -208921102 + AluJb SINE Alu 9 299 -13 2025 135 0 3 chr2 44335611 44335923 -208920660 - AluSq SINE Alu -2 311 1 931 167 0 7 chr2 44336259 44336409 -208920174 - AluJo/FRAM SINE Alu -30 282 134 2079 112 3 0 chr2 44336409 44336704 -208919879 - AluSx SINE Alu -15 297 2 213 39 0 0 chr2 44336706 44336732 -208919851 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 1982 68 60 0 chr2 44336732 44336878 -208919705 - AluY SINE Alu -30 281 145 275 0 29 0 chr2 44336878 44336913 -208919670 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 1982 68 60 0 chr2 44336913 44337031 -208919552 - AluY SINE Alu -166 145 1 2081 96 31 0 chr2 44337031 44337321 -208919262 - AluSp SINE Alu -13 300 1 1667 109 51 12 chr2 44337365 44337621 -208918962 - AluSq SINE Alu -47 266 1 659 168 26 0 chr2 44337621 44337734 -208918849 - AluJo SINE Alu -176 136 21 197 260 8 110 chr2 44337947 44338074 -208918509 + L2 LINE L2 2791 2904 -410 590 215 103 51 chr2 44338103 44338317 -208918266 + L2 LINE L2 3089 3313 0 250 281 34 11 chr2 44338379 44338468 -208918115 - L2 LINE L2 0 3313 3223 634 327 27 64 chr2 44338960 44339290 -208917293 - L2 LINE L2 -4 3268 2951 1167 203 6 84 chr2 44339381 44339514 -208917069 + AluJo SINE Alu 4 146 -156 2039 118 20 0 chr2 44339514 44339819 -208916764 + AluSx SINE Alu 1 311 -1 1167 203 6 84 chr2 44339819 44340001 -208916582 + AluJo SINE Alu 142 295 -3 261 0 0 0 chr2 44340001 44340030 -208916553 + (TA)n Simple_repeat Simple_repeat 1 29 0 280 250 102 23 chr2 44340052 44340140 -208916443 - MER5C DNA MER1_type -225 99 5 2212 98 0 0 chr2 44340379 44340674 -208915909 - AluSg SINE Alu -15 295 1 210 192 0 0 chr2 44342273 44342325 -208914258 + (TATATG)n Simple_repeat Simple_repeat 5 56 0 851 193 6 0 chr2 44342325 44342486 -208914097 - AluJo SINE Alu -14 298 137 742 146 15 31 chr2 44342615 44342745 -208913838 - AluJo SINE Alu -174 128 1 1400 162 0 126 chr2 44342842 44343176 -208913407 - AluJb SINE Alu -10 292 1 288 154 0 0 chr2 44343179 44343231 -208913352 - L1PA11 LINE L1 -6 6168 6117 305 57 0 38 chr2 44343231 44343284 -208913299 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 1864 116 0 0 chr2 44343284 44343543 -208913040 - AluSg SINE Alu -29 281 23 1702 115 29 0 chr2 44343543 44343784 -208912799 - AluSx SINE Alu -62 250 1 407 167 167 0 chr2 44344167 44344245 -208912338 - AluJ/FLAM SINE Alu -219 93 3 1622 167 0 41 chr2 44344256 44344574 -208912009 - AluJo SINE Alu -3 309 5 1956 104 59 0 chr2 44344655 44344944 -208911639 - AluSp SINE Alu -6 307 2 2333 60 0 3 chr2 44344955 44345253 -208911330 - AluY SINE Alu -14 297 1 668 178 0 39 chr2 44345402 44345531 -208911052 + FLAM_C SINE Alu 2 125 -18 273 259 104 44 chr2 44345807 44345942 -208910641 + MIR SINE MIR 25 167 -95 1842 139 17 7 chr2 44346436 44346730 -208909853 - AluSx SINE Alu -15 297 1 2009 108 7 7 chr2 44346741 44347037 -208909546 - AluSp SINE Alu -13 300 5 396 268 93 29 chr2 44347065 44347270 -208909313 - L1MC5 LINE L1 -36 7925 7708 551 185 57 38 chr2 44347279 44347436 -208909147 - L1MC4 LINE L1 -17 8025 7866 247 103 0 0 chr2 44347445 44347484 -208909099 - Alu SINE Alu -7 295 257 1368 162 0 66 chr2 44347509 44347780 -208908803 + AluJb SINE Alu 30 282 -30 1078 101 0 0 chr2 44347835 44347973 -208908610 - AluSg/x SINE Alu -16 296 159 2323 66 11 3 chr2 44347999 44348286 -208908297 - AluSp SINE Alu -24 289 1 2071 121 10 0 chr2 44348367 44348656 -208907927 - AluSx SINE Alu -4 308 17 602 225 0 29 chr2 44348714 44348852 -208907731 + FRAM SINE Alu 26 159 -17 1932 152 34 0 chr2 44348899 44349196 -208907387 + AluSq SINE Alu 1 307 -6 763 150 8 0 chr2 44349200 44349320 -208907263 + FLAM_C SINE Alu 1 121 -12 703 108 7 7 chr2 44349373 44349512 -208907071 + (CA)n Simple_repeat Simple_repeat 2 140 0 1643 150 55 46 chr2 44349517 44349638 -208906945 + AluSx SINE Alu 1 119 -193 2401 92 0 0 chr2 44349638 44349931 -208906652 + AluSc SINE Alu 1 293 -16 1643 150 55 46 chr2 44349931 44350116 -208906467 + AluSx SINE Alu 119 310 -2 524 138 92 0 chr2 44350126 44350213 -208906370 + AluJb SINE Alu 194 288 -24 1646 164 7 21 chr2 44350492 44350779 -208905804 - AluSx SINE Alu -11 301 19 1241 199 78 152 chr2 44350790 44351586 -208904997 - Charlie2a DNA MER1_type -348 2514 1778 247 219 12 12 chr2 44351641 44351723 -208904860 + (TA)n Simple_repeat Simple_repeat 1 82 0 1249 183 155 34 chr2 44351730 44352053 -208904530 - MLT2C1 LTR ERVL -33 364 3 283 149 30 45 chr2 44352055 44352122 -208904461 - Charlie2a DNA MER1_type -1087 1775 1710 21 0 0 0 chr2 44352213 44352234 -208904349 + AT_rich Low_complexity Low_complexity 1 21 0 728 212 25 30 chr2 44352237 44352435 -208904148 - Charlie2a DNA MER1_type -1206 1656 1460 1452 134 5 0 chr2 44352453 44352662 -208903921 - AluSg/x SINE Alu -17 295 86 613 210 164 96 chr2 44352662 44353015 -208903568 - Charlie2a DNA MER1_type -2377 405 29 2246 149 53 19 chr2 44353065 44353481 -208903102 + MSTB1 LTR MaLR 1 430 -2 1794 124 0 16 chr2 44353509 44353767 -208902816 - AluSx SINE Alu -9 303 50 3736 128 42 6 chr2 44353908 44354535 -208902048 - Tigger3(Golem) DNA MER2_type -1 3028 2380 2221 111 10 0 chr2 44354535 44354841 -208901742 - AluSg SINE Alu -1 309 1 246 274 32 21 chr2 44354980 44355075 -208901508 + L1M4 LINE L1 4822 4917 -1229 1334 234 97 35 chr2 44355090 44355521 -208901062 + LTR32 LTR ERVL 14 471 0 301 204 111 76 chr2 44355555 44355696 -208900887 - L1MC5 LINE L1 -465 7496 7346 1889 89 32 76 chr2 44355696 44356011 -208900572 - AluSx SINE Alu -11 301 1 301 204 111 76 chr2 44356011 44356041 -208900542 - L1MC5 LINE L1 -615 7346 7319 2133 102 9 35 chr2 44356243 44356624 -208899959 - AluSq SINE Alu 0 373 1 353 183 98 0 chr2 44356658 44356740 -208899843 - MER20B DNA MER1_type 0 783 694 510 296 41 27 chr2 44356752 44356972 -208899611 - HAL1 LINE L1 -889 1618 1396 2459 83 0 10 chr2 44357514 44357827 -208898756 - AluSg SINE Alu 0 310 1 213 108 0 0 chr2 44357861 44357898 -208898685 + (CA)n Simple_repeat Simple_repeat 2 38 0 1283 205 4 15 chr2 44358111 44358374 -208898209 + AluJo SINE Alu 37 296 -16 186 43 0 0 chr2 44358380 44358403 -208898180 + (TAGA)n Simple_repeat Simple_repeat 2 24 0 417 222 100 0 chr2 44358404 44358494 -208898089 - FLAM_A SINE Alu -26 116 18 1808 154 0 4 chr2 44358781 44359048 -208897535 - AluJo SINE Alu -34 278 13 1938 136 10 14 chr2 44359124 44359439 -208897144 + AluSx SINE Alu 1 312 0 1472 101 58 19 chr2 44359753 44360011 -208896572 - SVA Other Other -1116 270 3 1465 150 135 0 chr2 44360271 44360537 -208896046 - AluJo SINE Alu -10 302 1 1943 103 0 0 chr2 44360608 44360851 -208895732 + AluSx SINE Alu 47 289 -23 1944 151 3 3 chr2 44361494 44361786 -208894797 + AluSx SINE Alu 1 292 -20 230 182 0 0 chr2 44361795 44361850 -208894733 - L1MA4A LINE L1 -4 6299 6245 2083 131 3 3 chr2 44361925 44362223 -208894360 - AluSx SINE Alu -13 299 2 380 205 0 0 chr2 44362614 44362692 -208893891 - MER103 DNA DNA -51 115 38 2081 129 7 10 chr2 44362709 44363012 -208893571 + AluSx SINE Alu 1 302 -10 245 232 58 29 chr2 44363319 44363388 -208893195 + LTR8A LTR ERV1 593 663 -64 3606 35 0 23 chr2 44363567 44363996 -208892587 + SVA Other Other 968 1386 0 2312 96 0 3 chr2 44364231 44364523 -208892060 + AluSq SINE Alu 2 292 -21 2073 103 30 0 chr2 44364524 44364825 -208891758 + AluY SINE Alu 1 310 -1 22 35 0 0 chr2 44365445 44365474 -208891109 + AT_rich Low_complexity Low_complexity 1 29 0 308 263 12 12 chr2 44365863 44365943 -208890640 - MER81 DNA DNA -34 80 1 1147 205 56 46 chr2 44365981 44366284 -208890299 + L1ME LINE L1 5458 5763 -401 1570 158 0 82 chr2 44366294 44366438 -208890145 + AluSx SINE Alu 1 107 -205 1948 132 0 4 chr2 44366438 44366710 -208889873 + AluSx SINE Alu 9 279 -33 1570 158 0 82 chr2 44366710 44366881 -208889702 + AluSx SINE Alu 107 290 -22 634 234 0 0 chr2 44366887 44367011 -208889572 + FLAM_A SINE Alu 4 127 -6 934 251 19 19 chr2 44367103 44367366 -208889217 + L1MEc LINE L1 501 763 -5633 969 158 23 11 chr2 44367367 44367544 -208889039 + AluSc SINE Alu 1 179 -130 272 277 82 50 chr2 44368701 44368860 -208887723 + MIR SINE MIR 15 178 -84 2100 112 3 20 chr2 44368871 44369167 -208887416 - AluSq SINE Alu -22 291 1 2197 104 30 0 chr2 44369249 44369548 -208887035 - AluY SINE Alu -3 308 1 188 268 14 14 chr2 44369638 44369709 -208886874 - MIR3 SINE MIR -9 199 129 2100 75 27 30 chr2 44370492 44370787 -208885796 + AluY SINE Alu 3 296 -15 2345 97 0 7 chr2 44371097 44371406 -208885177 + AluY SINE Alu 1 307 -4 938 159 0 12 chr2 44371622 44371785 -208884798 + AluJb SINE Alu 129 289 -23 1779 132 15 7 chr2 44371789 44372062 -208884521 - Tigger3b DNA MER2_type -661 570 296 2153 112 0 7 chr2 44372062 44372358 -208884225 + AluSx SINE Alu 1 294 -18 778 230 17 17 chr2 44372379 44372557 -208884026 + AluJb SINE Alu 118 295 -17 1469 189 39 4 chr2 44372557 44372837 -208883746 - Tigger3b DNA MER2_type -940 291 2 443 153 0 47 chr2 44372934 44373019 -208883564 + FAM SINE Alu 89 169 -16 324 277 62 18 chr2 44373020 44373132 -208883451 - L1MC/D LINE L1 -2195 5613 5497 2049 120 41 0 chr2 44373145 44373436 -208883147 - AluSx SINE Alu -9 303 1 2080 119 38 3 chr2 44373438 44373731 -208882852 - AluSx SINE Alu -9 303 1 2233 97 0 13 chr2 44373785 44374084 -208882499 - AluSg SINE Alu -15 295 1 2061 137 0 16 chr2 44374223 44374529 -208882054 - AluSx SINE Alu -11 301 1 1517 164 31 17 chr2 44374554 44374847 -208881736 - AluJo SINE Alu -1 311 15 2028 123 7 7 chr2 44375401 44375702 -208880881 - AluSx SINE Alu -11 301 1 2092 109 24 3 chr2 44376300 44376593 -208879990 + AluSq SINE Alu 1 299 -14 475 153 0 12 chr2 44376619 44376704 -208879879 - L1MC4 LINE L1 -37 8005 7922 1062 135 107 10 chr2 44376709 44377058 -208879525 - LTR54 LTR ERV1 0 510 8 180 0 0 0 chr2 44377062 44377082 -208879501 + (TA)n Simple_repeat Simple_repeat 1 20 0 1560 220 8 38 chr2 44377083 44377478 -208879105 - L1MC4 LINE L1 -147 7895 7513 399 263 161 41 chr2 44377516 44378025 -208878558 - L1M4 LINE L1 -2702 3444 2875 665 168 0 77 chr2 44378532 44378675 -208877908 + FLAM_A SINE Alu 1 132 -1 2205 121 6 10 chr2 44378677 44378990 -208877593 + AluSx SINE Alu 1 312 0 999 171 17 11 chr2 44379162 44379343 -208877240 - AluSg/x SINE Alu -12 298 117 1074 173 0 25 chr2 44379692 44379894 -208876689 + AluJb SINE Alu 100 296 -16 2427 92 0 0 chr2 44379899 44380203 -208876380 + AluSg SINE Alu 5 308 -2 750 171 0 0 chr2 44380215 44380338 -208876245 + AluJb SINE Alu 2 124 -188 26 0 0 0 chr2 44380338 44380364 -208876219 + AT_rich Low_complexity Low_complexity 1 26 0 1908 133 3 27 chr2 44380367 44380667 -208875916 + AluSx SINE Alu 1 293 -19 23 0 0 0 chr2 44381816 44381839 -208874744 + AT_rich Low_complexity Low_complexity 1 23 0 229 196 78 0 chr2 44382099 44382150 -208874433 + L1P LINE L1 5319 5373 -795 2312 97 3 3 chr2 44382170 44382480 -208874103 + AluY SINE Alu 2 311 0 2033 131 3 0 chr2 44382541 44382832 -208873751 + AluSx SINE Alu 8 299 -13 24 0 0 0 chr2 44382859 44382883 -208873700 + AT_rich Low_complexity Low_complexity 1 24 0 1994 120 10 19 chr2 44383125 44383433 -208873150 - AluSc SINE Alu -4 305 1 2456 80 0 3 chr2 44383488 44383800 -208872783 - AluY SINE Alu 0 311 1 2155 102 3 20 chr2 44383840 44384145 -208872438 - AluSx SINE Alu -12 300 1 2005 151 0 19 chr2 44384347 44384665 -208871918 - AluJb SINE Alu 0 312 1 316 318 0 0 chr2 44385034 44385144 -208871439 + L1ME LINE L1 5606 5715 -406 1703 113 140 0 chr2 44385310 44385575 -208871008 + AluSq SINE Alu 1 302 -11 28 0 0 0 chr2 44385713 44385741 -208870842 + AT_rich Low_complexity Low_complexity 1 28 0 1284 191 70 33 chr2 44385741 44386013 -208870570 - AluJo SINE Alu -30 282 1 1719 182 0 10 chr2 44386387 44386689 -208869894 - AluJo SINE Alu -13 299 1 345 235 152 29 chr2 44387249 44387453 -208869130 + L1M4 LINE L1 4419 4647 -1499 806 231 156 35 chr2 44387520 44387776 -208868807 + Charlie1a DNA MER1_type 40 326 -1129 546 186 62 0 chr2 44387777 44387890 -208868693 - L1MB5 LINE L1 -2 6172 6053 2169 120 10 3 chr2 44387898 44388198 -208868385 - AluSx SINE Alu -10 302 1 822 190 40 30 chr2 44388220 44388272 -208868311 + Charlie1a DNA MER1_type 358 408 -2353 1643 210 0 3 chr2 44388272 44388572 -208868011 - AluJo SINE Alu -13 299 1 822 190 40 30 chr2 44388572 44388719 -208867864 + Charlie1a DNA MER1_type 408 559 -896 690 199 105 66 chr2 44388743 44388767 -208867816 + Charlie1a DNA MER1_type 1133 1155 -1606 571 94 24 0 chr2 44388767 44388852 -208867731 + L1MA9 LINE L1 6219 6305 -7 690 199 105 66 chr2 44388852 44388911 -208867672 + Charlie1a DNA MER1_type 1155 1210 -1551 10425 48 58 5 chr2 44388911 44390217 -208866366 - SVA Other Other -2 1384 10 690 199 105 66 chr2 44390217 44390418 -208866165 + Charlie1a DNA MER1_type 1210 1429 -26 762 202 0 0 chr2 44390438 44390567 -208866016 - FLAM_C SINE Alu -4 129 1 262 269 56 62 chr2 44390618 44390778 -208865805 + L1M4 LINE L1 4685 4843 -1303 372 198 0 12 chr2 44390966 44391052 -208865531 - MIR SINE MIR 0 262 178 325 244 24 0 chr2 44391466 44391548 -208865035 - MIR SINE MIR -98 164 81 631 179 72 5 chr2 44391577 44391729 -208864854 + L1MB3 LINE L1 5652 5815 -368 836 152 7 41 chr2 44391729 44391874 -208864709 + FRAM SINE Alu 1 138 -38 393 22 0 0 chr2 44391877 44391923 -208864660 + (TC)n Simple_repeat Simple_repeat 2 47 0 351 0 0 0 chr2 44391925 44391964 -208864619 + (CA)n Simple_repeat Simple_repeat 2 40 0 1313 150 113 30 chr2 44391970 44392270 -208864313 + L1MB3 LINE L1 5816 6140 -43 23 0 0 0 chr2 44392279 44392302 -208864281 + AT_rich Low_complexity Low_complexity 1 23 0 645 216 0 24 chr2 44392324 44392449 -208864134 + FLAM_A SINE Alu 1 122 -11 405 234 9 37 chr2 44392692 44392799 -208863784 - L2 LINE L2 0 3272 3169 2446 80 0 0 chr2 44393236 44393538 -208863045 - AluY SINE Alu -9 302 1 187 351 79 35 chr2 44393637 44393751 -208862832 + MIR SINE MIR 23 141 -67 2127 115 24 0 chr2 44394121 44394416 -208862167 - AluSg SINE Alu -8 302 1 1181 82 22 43 chr2 44394883 44395067 -208861516 + AluSq SINE Alu 132 311 -2 1323 210 95 0 chr2 44395774 44395918 -208860665 - AluJo SINE Alu -25 287 158 180 0 0 0 chr2 44395918 44395938 -208860645 + (TTTTG)n Simple_repeat Simple_repeat 5 24 0 1323 210 95 0 chr2 44395938 44396055 -208860528 - AluJo SINE Alu -154 158 1 2413 77 3 3 chr2 44396504 44396801 -208859782 + AluSg SINE Alu 1 297 -13 428 265 77 33 chr2 44396903 44397175 -208859408 + L1ME LINE L1 4767 5050 -1096 28 0 0 0 chr2 44397186 44397214 -208859369 + AT_rich Low_complexity Low_complexity 1 28 0 252 317 41 78 chr2 44397216 44397459 -208859124 + L1ME LINE L1 5638 5871 -299 1657 137 3 32 chr2 44397999 44398283 -208858300 - AluJb SINE Alu -2 310 35 650 160 0 56 chr2 44398549 44398674 -208857909 + FLAM_C SINE Alu 1 118 -25 205 240 92 0 chr2 44398840 44398914 -208857669 + MIR SINE MIR 93 172 -63 2086 103 10 7 chr2 44399147 44399438 -208857145 + AluSg SINE Alu 1 292 -18 637 177 31 8 chr2 44399791 44399921 -208856662 - AluSq/x SINE Alu -180 133 1 2001 122 7 0 chr2 44399937 44400223 -208856360 - AluSg SINE Alu -21 289 2 2048 125 0 14 chr2 44400249 44400577 -208856006 - AluSq SINE Alu 0 324 1 2101 115 0 3 chr2 44401136 44401422 -208855161 - AluSg SINE Alu -24 286 2 22 0 0 0 chr2 44401482 44401504 -208855079 + AT_rich Low_complexity Low_complexity 1 22 0 2223 196 115 35 chr2 44401509 44401830 -208854753 - LTR26E LTR ERV1 0 622 328 1939 125 21 10 chr2 44401830 44402119 -208854464 - AluSx SINE Alu -19 293 2 2223 196 115 35 chr2 44402119 44402373 -208854210 - LTR26E LTR ERV1 -294 328 1 457 226 149 6 chr2 44402603 44402771 -208853812 - L1MC4a LINE L1 -1944 5864 5673 1313 133 9 120 chr2 44403558 44403735 -208852848 - L1MA2 LINE L1 0 6304 6109 1899 160 0 0 chr2 44403735 44404035 -208852548 - AluSq SINE Alu -13 300 1 1313 133 9 120 chr2 44404035 44404137 -208852446 - L1MA2 LINE L1 -195 6109 6061 2280 74 7 7 chr2 44404137 44404435 -208852148 - AluY SINE Alu -13 298 1 1313 133 9 120 chr2 44404435 44404470 -208852113 - L1MA2 LINE L1 -243 6061 6024 2095 111 0 52 chr2 44405027 44405334 -208851249 + AluSc SINE Alu 1 291 -18 1847 157 18 0 chr2 44405346 44405632 -208850951 + AluJb SINE Alu 1 291 -21 2454 31 17 10 chr2 44405654 44405947 -208850636 + AluY SINE Alu 1 295 -16 1023 172 37 19 chr2 44406031 44406246 -208850337 + MER20 DNA MER1_type 1 219 0 1817 133 95 17 chr2 44406342 44406688 -208849895 - THE1C LTR MaLR -2 373 1 26 30 0 0 chr2 44406697 44406730 -208849853 + AT_rich Low_complexity Low_complexity 1 33 0 225 205 0 36 chr2 44406983 44407066 -208849517 - HAL1 LINE L1 -417 2090 2011 351 258 144 0 chr2 44407086 44407218 -208849365 - HAL1 LINE L1 -855 1652 1502 2086 135 0 7 chr2 44407390 44407687 -208848896 + AluSx SINE Alu 1 295 -17 1862 151 7 13 chr2 44407809 44408113 -208848470 - AluSx SINE Alu -10 302 1 283 248 21 99 chr2 44408116 44408257 -208848326 - MER5A DNA MER1_type -1 188 59 1761 156 7 11 chr2 44408303 44408610 -208847973 + AluJo SINE Alu 1 306 0 2314 95 3 0 chr2 44408663 44408969 -208847614 - AluSg SINE Alu -3 307 1 460 128 163 0 chr2 44410005 44410091 -208846492 + HY3 scRNA scRNA 1 100 -1 1316 137 122 38 chr2 44410434 44410697 -208845886 - AluJo SINE Alu -13 299 15 22 0 0 0 chr2 44410934 44410956 -208845627 + AT_rich Low_complexity Low_complexity 1 22 0 1291 117 0 0 chr2 44411096 44411275 -208845308 - AluSg/x SINE Alu -3 309 131 1917 156 0 0 chr2 44412963 44413251 -208843332 - AluSx SINE Alu -24 288 1 180 0 0 0 chr2 44413253 44413273 -208843310 + (T)n Simple_repeat Simple_repeat 1 20 0 2024 105 0 67 chr2 44413610 44413923 -208842660 + AluSg SINE Alu 1 292 -18 905 138 0 20 chr2 44413931 44414083 -208842500 + L1PB4 LINE L1 6006 6154 -2 892 129 0 15 chr2 44414426 44414558 -208842025 + FLAM_C SINE Alu 9 138 -5 2283 104 3 0 chr2 44414689 44414988 -208841595 - AluSq SINE Alu -13 300 1 230 229 43 0 chr2 44415523 44415593 -208840990 + (TATG)n Simple_repeat Simple_repeat 1 73 0 26 0 0 0 chr2 44416425 44416451 -208840132 + AT_rich Low_complexity Low_complexity 1 26 0 608 152 9 9 chr2 44416451 44416556 -208840027 - FLAM_C SINE Alu -25 118 14 10779 118 34 58 chr2 44416591 44417172 -208839411 + Tigger1 DNA MER2_type 9 602 -1816 463 86 0 29 chr2 44417172 44417242 -208839341 + Alu SINE Alu 238 305 -7 10779 118 34 58 chr2 44417242 44417286 -208839297 + Tigger1 DNA MER2_type 602 646 -1772 1896 156 7 0 chr2 44417286 44417603 -208838980 + AluSx SINE Alu 1 319 0 10779 118 34 58 chr2 44417603 44418916 -208837667 + Tigger1 DNA MER2_type 646 1970 -448 2405 60 7 3 chr2 44418916 44419218 -208837365 + AluY SINE Alu 1 303 -8 10779 118 34 58 chr2 44419218 44419269 -208837314 + Tigger1 DNA MER2_type 1970 2021 -397 1785 136 18 14 chr2 44419272 44419552 -208837031 - AluSx SINE Alu -21 291 11 2206 108 0 7 chr2 44419880 44420176 -208836407 - AluSq SINE Alu -19 294 1 495 342 31 0 chr2 44420901 44421094 -208835489 + MIR SINE MIR 29 227 -35 2070 96 3 58 chr2 44421148 44421460 -208835123 + AluSx SINE Alu 1 295 -17 286 206 32 71 chr2 44422203 44422329 -208834254 + MER20 DNA MER1_type 7 127 -92 2202 82 38 3 chr2 44422467 44422759 -208833824 - AluY SINE Alu -5 306 5 3035 114 88 7 chr2 44422926 44423463 -208833120 - Tigger3(Golem) DNA MER2_type -2 3027 2448 1860 133 7 33 chr2 44423543 44423844 -208832739 + AluJb SINE Alu 2 294 -18 1961 95 60 11 chr2 44423846 44424131 -208832452 + AluSq SINE Alu 1 299 -14 740 176 52 150 chr2 44424149 44424530 -208832053 - LTR49 LTR ERV1 -245 350 7 706 168 0 8 chr2 44424560 44424679 -208831904 - FLAM_C SINE Alu -15 118 1 329 253 11 21 chr2 44424821 44424916 -208831667 - L1M4 LINE L1 -1981 4165 4072 22 0 0 0 chr2 44425946 44425968 -208830615 + AT_rich Low_complexity Low_complexity 1 22 0 190 293 20 101 chr2 44426395 44426494 -208830089 - L2 LINE L2 -33 3280 3190 1518 210 4 11 chr2 44426671 44426947 -208829636 - AluJb SINE Alu -38 274 1 2164 141 0 0 chr2 44427635 44427934 -208828649 - AluSx SINE Alu -13 299 1 361 292 76 21 chr2 44428846 44428990 -208827593 + L1ME2 LINE L1 5725 5876 -288 26 0 0 0 chr2 44429138 44429164 -208827419 + AT_rich Low_complexity Low_complexity 1 26 0 874 165 0 0 chr2 44429677 44429810 -208826773 + FLAM_C SINE Alu 1 133 0 2262 104 3 19 chr2 44429816 44430132 -208826451 + AluSx SINE Alu 1 311 -1 1679 265 136 8 chr2 44430140 44430801 -208825782 + L1ME3A LINE L1 5417 6162 -8 1836 147 0 71 chr2 44430832 44431158 -208825425 + AluJo SINE Alu 8 310 -2 2205 123 7 0 chr2 44432110 44432420 -208824163 - AluSx SINE Alu 0 312 1 1832 189 0 6 chr2 44432424 44432736 -208823847 - AluJo SINE Alu -2 310 1 287 149 14 68 chr2 44432822 44432896 -208823687 - LTR50 LTR ERVL -720 75 6 2157 115 3 0 chr2 44433032 44433328 -208823255 + AluSp SINE Alu 1 297 -16 280 149 21 0 chr2 44433703 44433750 -208822833 - Alu SINE Alu -254 48 1 394 143 0 0 chr2 44434013 44434076 -208822507 + Tigger5 DNA MER2_type 2237 2299 -24 851 309 129 5 chr2 44434152 44434524 -208822059 - LTR16A LTR ERVL -2 448 31 259 213 120 13 chr2 44434542 44434617 -208821966 - MLT1I LTR MaLR -46 363 281 * 272 263 163 19 chr2 44434589 44434893 -208821690 - MLT1H LTR MaLR -161 388 4 2362 93 0 10 chr2 44435177 44435489 -208821094 - AluSc SINE Alu 0 309 1 47 0 0 0 chr2 44435543 44435590 -208820993 + AT_rich Low_complexity Low_complexity 1 47 0 302 171 98 12 chr2 44435594 44435676 -208820907 - AluSg SINE Alu -211 89 1 2066 139 3 3 chr2 44435713 44436023 -208820560 - AluSg SINE Alu 0 310 1 476 237 114 41 chr2 44436041 44436260 -208820323 - L1ME3 LINE L1 -1 6161 5927 1972 164 0 0 chr2 44437072 44437370 -208819213 + AluJb SINE Alu 1 298 -14 1292 169 58 73 chr2 44437555 44437765 -208818818 - MER44D DNA MER2_type -1882 609 397 2307 77 27 61 chr2 44437765 44437921 -208818662 + THE1B LTR MaLR 3 163 -201 2107 124 3 7 chr2 44437921 44438227 -208818356 - AluSx SINE Alu -2 310 6 2307 77 27 61 chr2 44438227 44438445 -208818138 + THE1B LTR MaLR 163 364 0 1292 169 58 73 chr2 44438445 44438577 -208818006 - MER44D DNA MER2_type -2094 397 2 2117 117 37 0 chr2 44438918 44439217 -208817366 - AluSx SINE Alu -2 310 1 434 243 37 44 chr2 44439535 44439671 -208816912 - MIR SINE MIR -56 206 72 1425 178 53 18 chr2 44441347 44441628 -208814955 - AluJb SINE Alu -21 291 1 1765 159 10 10 chr2 44442092 44442388 -208814195 - AluJb SINE Alu -5 307 12 527 174 0 0 chr2 44442409 44442501 -208814082 + FRAM SINE Alu 77 168 -8 28 0 0 0 chr2 44442503 44442531 -208814052 + AT_rich Low_complexity Low_complexity 1 28 0 1401 157 81 4 chr2 44442538 44442774 -208813809 + AluJo SINE Alu 26 279 -33 24 91 0 0 chr2 44442833 44442899 -208813684 + AT_rich Low_complexity Low_complexity 1 66 0 1997 135 3 3 chr2 44443379 44443682 -208812901 + AluSg SINE Alu 1 303 -7 3291 124 56 2 chr2 44443989 44444488 -208812095 - MER1A DNA MER1_type -1 526 1 25 0 0 0 chr2 44444499 44444524 -208812059 + AT_rich Low_complexity Low_complexity 1 25 0 745 122 65 14 chr2 44444524 44444663 -208811920 - L1MA9 LINE L1 0 6312 6167 201 296 92 71 chr2 44445364 44445462 -208811121 - L2 LINE L2 -19 3253 3154 1864 210 30 74 chr2 44446898 44446992 -208809591 - L1ME1 LINE L1 -18 6148 6051 885 136 8 0 chr2 44446992 44447124 -208809459 + FLAM_C SINE Alu 1 133 0 2132 120 0 7 chr2 44447132 44447423 -208809160 + AluSx SINE Alu 3 291 -21 1973 144 0 26 chr2 44447424 44447729 -208808854 + AluSx SINE Alu 1 297 -15 1864 210 30 74 chr2 44447729 44448219 -208808364 - L1ME1 LINE L1 -121 6045 5579 857 245 22 24 chr2 44448221 44448611 -208807972 + MLT2F LTR ERVL 3 436 -227 273 171 0 0 chr2 44448612 44448667 -208807916 + L1MC/D LINE L1 5525 5582 -587 232 162 0 0 chr2 44448669 44448706 -208807877 - MLT2F LTR ERVL -2 661 625 1374 172 0 51 chr2 44448714 44448970 -208807613 - AluJo SINE Alu -68 244 2 670 219 61 15 chr2 44448973 44449245 -208807338 - L1M1 LINE L1 -743 5403 5204 * 1883 208 37 49 chr2 44449243 44449859 -208806724 - L1M4 LINE L1 -1827 4555 3947 1432 224 79 83 chr2 44449919 44450588 -208805995 - L1M4 LINE L1 -2414 3968 3301 738 198 5 86 chr2 44450588 44450775 -208805808 + FAM SINE Alu 3 174 -1 1432 224 79 83 chr2 44450775 44450828 -208805755 - L1M4 LINE L1 -3081 3301 3249 309 333 20 25 chr2 44450983 44451184 -208805399 - L1M4 LINE L1 -4883 1501 1302 426 124 0 174 chr2 44451202 44451268 -208805315 - L1MA2 LINE L1 0 6304 6267 1999 92 13 70 chr2 44451268 44451429 -208805154 - AluSc SINE Alu -13 296 160 2002 129 0 0 chr2 44451429 44451745 -208804838 - AluSx SINE Alu 0 312 20 1999 92 13 70 chr2 44451745 44451897 -208804686 - AluSc SINE Alu -149 160 1 426 124 0 174 chr2 44451897 44451951 -208804632 - L1MA2 LINE L1 -37 6267 6205 3469 125 32 4 chr2 44451989 44452944 -208803639 - L1M1 LINE L1 -4287 3278 2247 200 35 35 0 chr2 44503136 44503165 -208753418 + (CA)n Simple_repeat Simple_repeat 1 30 0 939 143 0 0 chr2 44503435 44503568 -208753015 - FLAM_C SINE Alu 0 133 1 1121 103 0 0 chr2 44504051 44504241 -208752342 - AluY SINE Alu 0 326 137 893 96 44 0 chr2 44504342 44504477 -208752106 + MER4-int LTR ERV1 1959 2099 -4499 866 116 78 0 chr2 44504478 44504607 -208751976 - LTR8 LTR ERV1 -552 139 1 2849 117 80 16 chr2 44504607 44505155 -208751428 + MER4-int LTR ERV1 2737 3319 -3279 2148 75 32 75 chr2 44505160 44505329 -208751254 + MER4-int LTR ERV1 3919 4094 -2504 2036 134 3 7 chr2 44505329 44505621 -208750962 - AluSg SINE Alu -19 291 1 2148 75 32 75 chr2 44505621 44505823 -208750760 + MER4-int LTR ERV1 4094 4274 -2324 183 114 0 0 chr2 44505839 44505874 -208750709 + (A)n Simple_repeat Simple_repeat 1 35 0 30 45 0 0 chr2 44505927 44505971 -208750612 + AT_rich Low_complexity Low_complexity 1 44 0 244 324 42 133 chr2 44506305 44506506 -208750077 - L2 LINE L2 -13 3259 3104 1933 176 0 3 chr2 44506506 44506819 -208749764 - AluJb SINE Alu 0 312 1 244 324 42 133 chr2 44506819 44506978 -208749605 - L2 LINE L2 -168 3104 2932 486 0 0 0 chr2 44509468 44509522 -208747061 + (CA)n Simple_repeat Simple_repeat 2 55 0 1731 145 23 0 chr2 44509558 44509820 -208746763 + AluJo SINE Alu 1 268 -44 189 0 0 0 chr2 44509827 44509848 -208746735 + (CA)n Simple_repeat Simple_repeat 1 21 0 189 237 17 17 chr2 44510277 44510336 -208746247 - MIR SINE MIR -31 231 173 * 451 289 44 0 chr2 44510332 44510446 -208746137 + L2 LINE L2 3153 3271 -1 307 339 16 16 chr2 44510452 44510573 -208746010 - MIR SINE MIR -131 131 11 391 191 123 0 chr2 44510729 44510897 -208745686 - LTR50 LTR ERVL -169 626 358 366 232 106 0 chr2 44510935 44511086 -208745497 - LTR50 LTR ERVL -589 206 40 2345 45 0 0 chr2 44511548 44511815 -208744768 - L1PA3 LINE L1 -3 6152 5886 1429 209 3 21 chr2 44512105 44512388 -208744195 + AluJo SINE Alu 5 282 -30 207 0 0 0 chr2 44512392 44512415 -208744168 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 213 394 32 19 chr2 44512819 44512974 -208743609 + MIR SINE MIR 32 188 -74 10667 157 41 30 chr2 44512999 44514278 -208742305 - L1MA3 LINE L1 0 7724 6461 2356 76 10 25 chr2 44514278 44514592 -208741991 - AluY SINE Alu -2 309 1 10667 157 41 30 chr2 44514592 44516561 -208740022 - L1MA3 LINE L1 -1263 6461 4438 2797 78 29 0 chr2 44516562 44516907 -208739676 - THE1A LTR MaLR 0 355 1 10636 90 81 0 chr2 44516907 44518369 -208738214 - THE1A-int LTR MaLR 0 1580 1 2886 77 11 0 chr2 44518369 44518720 -208737863 - THE1A LTR MaLR 0 355 1 806 181 7 0 chr2 44518720 44518875 -208737708 - L1MA3 LINE L1 -3124 4441 4286 824 149 8 8 chr2 44518898 44519032 -208737551 - AluJo SINE Alu -178 134 1 16077 145 33 25 chr2 44519032 44522875 -208733708 - L1MA3 LINE L1 -3266 4299 12 464 303 26 19 chr2 44522875 44523030 -208733553 - MIR SINE MIR -57 205 50 15325 113 18 57 chr2 44523095 44523212 -208733371 - Tigger1 DNA MER2_type 0 2418 2298 1578 183 8 0 chr2 44523212 44523480 -208733103 + AluJb SINE Alu 1 270 -42 9542 43 6 0 chr2 44523480 44524545 -208732038 + MER11C LTR ERVK 1 1071 0 15325 113 18 57 chr2 44524545 44525461 -208731122 - Tigger1 DNA MER2_type -119 2299 1348 1782 152 25 4 chr2 44525461 44525737 -208730846 + AluJo SINE Alu 1 282 -30 225 65 0 0 chr2 44525738 44525769 -208730814 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 15325 113 18 57 chr2 44525769 44527249 -208729334 - Tigger1 DNA MER2_type -1069 1349 1 2050 145 0 0 chr2 44527359 44527662 -208728921 - AluSx SINE Alu 0 312 10 187 339 36 0 chr2 44527879 44527935 -208728648 + L2 LINE L2 3199 3256 -16 534 174 17 35 chr2 44530646 44530761 -208725822 - HAL1 LINE L1 -1274 1233 1121 758 174 0 61 chr2 44530786 44530918 -208725665 - FLAM_C SINE Alu -19 124 1 593 233 93 5 chr2 44530947 44531057 -208725526 - L1M4 LINE L1 -3621 3944 3845 2207 108 0 0 chr2 44531057 44531344 -208725239 - AluSc SINE Alu -22 287 1 593 233 93 5 chr2 44531344 44531426 -208725157 - L1M4 LINE L1 -3720 3845 3735 2912 150 56 71 chr2 44531561 44532234 -208724349 - MER21B LTR ERV1 -1 862 372 2212 107 7 0 chr2 44532234 44532532 -208724051 - AluSx SINE Alu -12 300 1 2912 150 56 71 chr2 44532532 44532823 -208723760 - MER21B LTR ERV1 -491 372 78 10017 161 73 52 chr2 44532930 44532990 -208723593 - L1M4 LINE L1 -5319 2246 2189 2193 129 0 7 chr2 44532990 44533299 -208723284 - AluSx SINE Alu -5 307 1 10017 161 73 52 chr2 44533299 44535294 -208721289 - L1M4 LINE L1 -5376 2189 149 1592 153 59 14 chr2 44535431 44535719 -208720864 + AluJb SINE Alu 1 301 -11 2224 128 3 3 chr2 44535925 44536237 -208720346 + AluSx SINE Alu 1 312 0 835 177 8 0 chr2 44537197 44537327 -208719256 + FLAM_C SINE Alu 2 132 -1 183 42 0 0 chr2 44537955 44537979 -208718604 + (GA)n Simple_repeat Simple_repeat 2 25 0 310 208 0 0 chr2 44538986 44539034 -208717549 + AluJ/monomer SINE Alu 1 48 -251 342 242 30 0 chr2 44539702 44539768 -208716815 + MER58A DNA MER1_type 1 68 -39 1285 164 19 0 chr2 44539774 44539982 -208716601 - AluJo SINE Alu -12 300 89 724 278 278 32 chr2 44540005 44540689 -208715894 - L2 LINE L2 -573 2741 1890 1633 195 14 3 chr2 44541391 44541678 -208714905 + AluJb SINE Alu 1 290 -22 22 56 0 0 chr2 44541690 44541726 -208714857 + AT_rich Low_complexity Low_complexity 1 36 0 1066 138 63 0 chr2 44541726 44541885 -208714698 + AluJb SINE Alu 135 303 -9 1472 171 51 41 chr2 44541890 44542183 -208714400 + AluJo SINE Alu 1 296 -16 2286 78 14 7 chr2 44542206 44542499 -208714084 + AluSq SINE Alu 1 295 -18 2381 106 0 0 chr2 44542501 44542813 -208713770 + AluSq SINE Alu 1 312 -1 184 133 0 0 chr2 44543242 44543272 -208713311 + L2 LINE L2 3193 3222 -91 1449 136 0 37 chr2 44543546 44543788 -208712795 - AluJo SINE Alu -31 281 49 2405 68 0 0 chr2 44544181 44544477 -208712106 + AluY SINE Alu 1 296 -15 264 240 40 0 chr2 44545210 44545285 -208711298 - MER103 DNA DNA -31 135 58 2249 92 0 3 chr2 44545995 44546278 -208710305 + AluSx SINE Alu 1 282 -30 22 0 0 0 chr2 44546383 44546405 -208710178 + AT_rich Low_complexity Low_complexity 1 22 0 1632 52 5 0 chr2 44546667 44546858 -208709725 + L1PA3 LINE L1 5961 6152 -3 237 163 0 0 chr2 44547521 44547570 -208709013 + C-rich Low_complexity Low_complexity 3 51 0 730 178 54 0 chr2 44547573 44547702 -208708881 - AluJb SINE Alu -41 271 136 2218 109 0 13 chr2 44547815 44548119 -208708464 - AluY SINE Alu -11 300 1 206 233 0 0 chr2 44549717 44549760 -208706823 + CT-rich Low_complexity Low_complexity 2 44 0 2485 84 13 0 chr2 44550843 44551151 -208705432 + AluSq SINE Alu 1 312 -1 2181 126 13 7 chr2 44551369 44551678 -208704905 + AluSx SINE Alu 1 311 -1 288 0 0 0 chr2 44552356 44552388 -208704195 + (TG)n Simple_repeat Simple_repeat 2 33 0 969 171 59 11 chr2 44552875 44553062 -208703521 - AluJo SINE Alu -19 293 98 624 112 9 19 chr2 44553312 44553419 -208703164 + U6 snRNA snRNA 1 106 -1 792 279 111 52 chr2 44554308 44554867 -208701716 - L1MC4a LINE L1 -1960 5848 5257 23 78 0 0 chr2 44554924 44554975 -208701608 + AT_rich Low_complexity Low_complexity 1 51 0 1935 101 64 34 chr2 44555226 44555553 -208701030 - MER1B DNA MER1_type 0 337 1 912 117 58 0 chr2 44555979 44556116 -208700467 - FRAM SINE Alu -6 170 26 4784 93 15 12 chr2 44556898 44557630 -208698953 - L1PA13 LINE L1 -2 6161 5428 207 0 0 0 chr2 44557700 44557723 -208698860 + (T)n Simple_repeat Simple_repeat 1 23 0 1727 114 38 0 chr2 44558167 44558282 -208698301 - AluSc SINE Alu -63 246 137 390 21 0 0 chr2 44558282 44558329 -208698254 + (TG)n Simple_repeat Simple_repeat 2 48 0 1727 114 38 0 chr2 44558329 44558450 -208698133 - AluSc SINE Alu -172 137 1 271 104 0 21 chr2 44558454 44558502 -208698081 - L1ME2 LINE L1 -226 5938 5892 * 837 307 42 34 chr2 44558492 44558994 -208697589 - L1MEc LINE L1 -5231 1030 525 996 273 34 95 chr2 44559067 44559535 -208697048 - L1MEc LINE L1 -5538 532 102 2158 132 0 22 chr2 44559535 44559854 -208696729 - AluSx SINE Alu 0 312 1 996 273 34 95 chr2 44559854 44559945 -208696638 - L1MEc LINE L1 -5968 102 7 1989 260 71 42 chr2 44559998 44560067 -208696516 - HAL1 LINE L1 -1476 1031 965 2377 97 3 0 chr2 44560067 44560375 -208696208 - AluSc SINE Alu 0 309 1 1989 260 71 42 chr2 44560375 44561192 -208695391 - HAL1 LINE L1 -1542 965 119 266 239 45 0 chr2 44562078 44562145 -208694438 + MIR SINE MIR 46 115 -147 1760 164 7 20 chr2 44563016 44563315 -208693268 - AluJo SINE Alu -17 295 1 764 254 123 46 chr2 44566095 44566551 -208690032 - LTR33A LTR ERVL -8 515 25 2350 114 0 0 chr2 44567662 44567968 -208688615 - AluSx SINE Alu -6 306 1 790 183 78 0 chr2 44568606 44568759 -208687824 + MIR SINE MIR 67 231 -31 265 271 71 71 chr2 44568872 44569141 -208687442 + L2 LINE L2 1704 1972 -1342 233 195 0 39 chr2 44574052 44574129 -208682454 + GA-rich Low_complexity Low_complexity 6 79 0 262 200 200 0 chr2 44575389 44575479 -208681104 + MIR SINE MIR 106 213 -49 2697 45 0 3 chr2 44575481 44575790 -208680793 + AluY SINE Alu 1 308 -3 1409 145 9 18 chr2 44576706 44576934 -208679649 + AluJb SINE Alu 86 311 -1 419 306 94 76 chr2 44578976 44579359 -208677224 + L2 LINE L2 2882 3271 -1 399 21 0 0 chr2 44579656 44579704 -208676879 + (TG)n Simple_repeat Simple_repeat 1 48 0 192 97 0 0 chr2 44579706 44579737 -208676846 + (GA)n Simple_repeat Simple_repeat 2 32 0 278 280 13 0 chr2 44580939 44581014 -208675569 - MIR SINE MIR -127 135 60 203 237 17 51 chr2 44581038 44581097 -208675486 - MIR3 SINE MIR -38 170 114 1789 103 3 155 chr2 44581181 44581548 -208675035 + AluY SINE Alu 1 311 0 2446 100 0 0 chr2 44582285 44582585 -208673998 + AluSx SINE Alu 1 300 -12 246 167 97 0 chr2 44582716 44582788 -208673795 - L1MB7 LINE L1 -14 6170 6092 * 286 172 46 11 chr2 44582768 44582855 -208673728 + L1ME4a LINE L1 6032 6121 0 377 154 0 51 chr2 44582944 44583040 -208673543 + AluJ/FRAM SINE Alu 233 302 0 414 300 0 0 chr2 44583308 44583418 -208673165 + MIR SINE MIR 146 255 -7 499 149 35 0 chr2 44583583 44583670 -208672913 + MER4A LTR ERV1 1 90 -574 2503 69 0 13 chr2 44583670 44583976 -208672607 - AluY SINE Alu -9 302 1 1728 124 5 77 chr2 44583996 44584368 -208672215 + MER4A LTR ERV1 261 664 0 2700 112 45 5 chr2 44584371 44585018 -208671565 + MER4A-int LTR ERV1 1 809 -5789 2377 106 7 0 chr2 44585053 44585356 -208671227 + AluSg SINE Alu 1 305 -5 253 154 77 19 chr2 44585424 44585476 -208671107 + LTR49 LTR ERV1 258 312 -283 1342 155 53 64 chr2 44585505 44586029 -208670554 + MER4-int LTR ERV1 503 1568 -4320 228 86 29 0 chr2 44586032 44586067 -208670516 + U2 snRNA snRNA 1 36 -152 2347 90 7 56 chr2 44586067 44586318 -208670265 + MER4-int LTR ERV1 1558 1820 -4778 2332 111 7 0 chr2 44586318 44586624 -208669959 - AluSp SINE Alu -5 308 1 2347 90 7 56 chr2 44586624 44586712 -208669871 + MER4-int LTR ERV1 1820 1876 -4722 2305 108 0 7 chr2 44586712 44587017 -208669566 - AluSg1 SINE Alu -5 304 2 2347 90 7 56 chr2 44587017 44587086 -208669497 + MER4-int LTR ERV1 1876 1947 -4651 349 142 0 5 chr2 44587086 44587151 -208669432 + Alu SINE Alu 1 45 -255 335 131 0 0 chr2 44587252 44587313 -208669270 + AluSp/q SINE Alu 241 301 -2 12558 103 66 31 chr2 44587317 44587512 -208669071 + MER4A-int LTR ERV1 4293 4480 -2118 2310 90 7 0 chr2 44587512 44587801 -208668782 - AluSg SINE Alu -19 291 1 12558 103 66 31 chr2 44587801 44588380 -208668203 + MER4A-int LTR ERV1 4480 5038 -1560 2530 85 0 0 chr2 44588380 44588687 -208667896 - AluSc SINE Alu -1 308 2 12558 103 66 31 chr2 44588687 44588968 -208667615 + MER4A-int LTR ERV1 5038 5308 -1290 2433 71 0 32 chr2 44588968 44589276 -208667307 + AluY SINE Alu 1 298 -13 12558 103 66 31 chr2 44589276 44589773 -208666810 + MER4A-int LTR ERV1 5308 5786 -812 2365 104 0 3 chr2 44589773 44590070 -208666513 + AluSq SINE Alu 1 296 -17 12558 103 66 31 chr2 44590070 44590741 -208665842 + MER4A-int LTR ERV1 5786 6596 -2 527 132 22 11 chr2 44590748 44590839 -208665744 + MER4A LTR ERV1 1 92 -572 1732 126 161 75 chr2 44590845 44591217 -208665366 + MER4A LTR ERV1 261 664 0 348 286 81 76 chr2 44592270 44592480 -208664103 - MIR SINE MIR -23 239 29 210 139 0 0 chr2 44592589 44592625 -208663958 + (G)n Simple_repeat Simple_repeat 1 36 0 371 268 12 0 chr2 44592935 44593017 -208663566 + MER81 DNA DNA 29 111 -3 442 238 171 24 chr2 44593134 44593298 -208663285 + MIR SINE MIR 60 247 -15 267 266 95 22 chr2 44593310 44593532 -208663051 + L1ME4a LINE L1 5708 5945 -176 318 186 142 26 chr2 44593543 44593656 -208662927 + L1ME4a LINE L1 5995 6120 -1 1771 177 23 7 chr2 44593662 44593962 -208662621 + AluJb SINE Alu 1 305 -7 549 0 0 0 chr2 44594086 44594147 -208662436 + (TG)n Simple_repeat Simple_repeat 2 62 0 232 309 155 30 chr2 44594561 44594729 -208661854 - MIR SINE MIR -9 253 65 204 244 0 0 chr2 44595681 44595722 -208660861 + L2 LINE L2 3230 3270 -2 404 274 57 0 chr2 44597237 44597361 -208659222 + MIR SINE MIR 127 257 -5 1926 123 45 0 chr2 44597375 44597668 -208658915 + AluSx SINE Alu 1 305 0 219 311 194 0 chr2 44597671 44597774 -208658809 - MIR3 SINE MIR -52 156 34 2330 109 3 0 chr2 44598605 44598908 -208657675 - AluSx SINE Alu -8 304 1 261 250 163 0 chr2 44598993 44599073 -208657510 + L2 LINE L2 2672 2764 -550 1624 146 26 16 chr2 44599095 44599403 -208657180 + MLT1C LTR MaLR 9 319 -148 265 300 29 44 chr2 44599568 44599749 -208656834 + MIR SINE MIR 4 226 -36 208 271 0 17 chr2 44600464 44600523 -208656060 + G-rich Low_complexity Low_complexity 5 62 0 205 211 0 0 chr2 44601924 44601962 -208654621 + T-rich Low_complexity Low_complexity 1 38 0 238 278 136 54 chr2 44603037 44603394 -208653189 - L1M4 LINE L1 -3247 2899 2480 1384 127 93 21 chr2 44603394 44603685 -208652898 - AluJb SINE Alu 0 312 1 238 278 136 54 chr2 44603685 44603878 -208652705 - L1M4 LINE L1 -3666 2480 2304 1012 233 124 68 chr2 44603884 44604205 -208652378 + MLT1H LTR MaLR 1 343 -249 417 268 0 16 chr2 44604305 44604432 -208652151 - MER113 DNA MER1_type? -395 126 2 226 300 50 50 chr2 44604464 44604564 -208652019 + L2 LINE L2 3154 3253 -19 1834 113 20 27 chr2 44605787 44606087 -208650496 - AluSx SINE Alu -14 298 1 2382 65 0 10 chr2 44606285 44606592 -208649991 - AluY SINE Alu -7 304 1 2073 94 14 0 chr2 44606927 44607215 -208649368 - AluSx SINE Alu -19 293 2 312 148 0 19 chr2 44607217 44607271 -208649312 + MLT1G1 LTR MaLR 543 595 0 261 128 0 0 chr2 44607468 44607507 -208649076 - MLT1D LTR MaLR 0 505 467 720 209 0 0 chr2 44607508 44607647 -208648936 + FLAM_C SINE Alu 2 140 -3 1926 191 113 28 chr2 44607656 44608091 -208648492 - MLT1D LTR MaLR -33 472 1 344 322 116 15 chr2 44608142 44608341 -208648242 - MLT1L LTR MaLR -8 607 389 1661 162 0 4 chr2 44608501 44608772 -208647811 - AluJo SINE Alu -38 274 5 1036 212 96 23 chr2 44608784 44609130 -208647453 + LTR50 LTR ERVL 330 779 -16 930 174 29 174 chr2 44609946 44610337 -208646246 + L1ME LINE L1 5282 5537 -629 1431 196 10 10 chr2 44610337 44610628 -208645955 + AluJo SINE Alu 1 291 -21 930 174 29 174 chr2 44610628 44610688 -208645895 + L1ME LINE L1 5537 5604 -562 * 4726 167 20 28 chr2 44610655 44611698 -208644885 + L1MB4 LINE L1 5145 6179 -1 579 117 0 0 chr2 44611707 44611784 -208644799 + AluS SINE Alu 1 77 -236 539 93 0 12 chr2 44611810 44611896 -208644687 + L1MB4 LINE L1 6095 6179 -1 675 222 103 18 chr2 44611907 44612147 -208644436 + L1ME LINE L1 5593 5856 -298 602 319 71 8 chr2 44612648 44612886 -208643697 + MIR SINE MIR 10 262 0 822 227 33 70 chr2 44612968 44613241 -208643342 - LTR41 LTR ERVL -15 758 496 599 247 65 18 chr2 44613342 44613512 -208643071 - LTR41 LTR ERVL -595 178 1 604 230 32 0 chr2 44613604 44613730 -208642853 - MER94 DNA DNA 0 134 5 998 243 3 14 chr2 44614055 44614351 -208642232 - AluY SINE Alu 0 311 19 2507 64 0 0 chr2 44614700 44615011 -208641572 - AluY SINE Alu 0 311 1 526 213 28 7 chr2 44615019 44615160 -208641423 + HsTC2 DNA Tc2 1752 1895 -3 264 335 162 0 chr2 44615181 44615360 -208641223 - L1MC/D LINE L1 -2149 5659 5452 494 141 0 0 chr2 44616531 44616602 -208639981 - AluSg/x SINE Alu -24 288 218 787 136 0 0 chr2 44616607 44616717 -208639866 - AluSq/x SINE Alu -202 111 2 355 207 110 0 chr2 44616872 44616954 -208639629 - MIR3 SINE MIR -20 188 98 686 169 79 101 chr2 44618220 44618498 -208638085 - ORSL DNA AcHobo -3 272 1 245 254 123 8 chr2 44618498 44618620 -208637963 - Charlie8 DNA MER1_type -2234 183 48 30 59 0 0 chr2 44618770 44618821 -208637762 + GC_rich Low_complexity Low_complexity 1 51 0 246 32 0 0 chr2 44618919 44618950 -208637633 + (CCCCAG)n Simple_repeat Simple_repeat 4 34 0 24 53 0 0 chr2 44619849 44619887 -208636696 + GC_rich Low_complexity Low_complexity 1 38 0 27 29 0 0 chr2 44620674 44620708 -208635875 + AT_rich Low_complexity Low_complexity 1 34 0 1432 111 42 65 chr2 44620708 44620970 -208635613 + AluSx SINE Alu 6 261 -51 266 0 29 0 chr2 44620984 44621018 -208635565 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 2372 56 20 0 chr2 44621022 44621324 -208635259 + AluY SINE Alu 1 308 -3 1710 166 51 13 chr2 44621362 44621736 -208634847 - L1MB8 LINE L1 -6 6172 5785 467 263 135 0 chr2 44621969 44622125 -208634458 - L3 LINE CR1 -37 1540 1364 1804 142 38 0 chr2 44622368 44622656 -208633927 + AluJb SINE Alu 1 299 -13 521 310 136 6 chr2 44622885 44623201 -208633382 + L3 LINE CR1 654 1010 -567 481 262 124 74 chr2 44623219 44623391 -208633192 + Charlie8 DNA MER1_type 1 163 -233 1939 111 50 0 chr2 44623391 44623670 -208632913 + AluSx SINE Alu 1 293 -19 481 262 124 74 chr2 44623670 44623838 -208632745 + Charlie8 DNA MER1_type 163 327 -69 181 290 48 0 chr2 44623900 44623962 -208632621 + L3 LINE CR1 1019 1083 -494 1065 235 104 77 chr2 44624014 44624647 -208631936 - L1MC5 LINE L1 -44 7917 7268 432 220 17 8 chr2 44624821 44624939 -208631644 - L1MC4 LINE L1 -791 7251 7133 278 263 140 0 chr2 44624946 44625060 -208631523 - L1MC5 LINE L1 -880 7081 6952 359 188 0 0 chr2 44625096 44625160 -208631423 - L1MB8 LINE L1 -761 5405 5342 851 169 52 0 chr2 44625161 44625315 -208631268 - FRAM SINE Alu -10 166 5 2879 206 47 64 chr2 44625317 44625423 -208631160 - L1MB8 LINE L1 -813 5333 5227 1986 129 3 0 chr2 44625423 44625710 -208630873 - AluSx SINE Alu -24 288 1 2879 206 47 64 chr2 44625710 44626415 -208630168 - L1MB8 LINE L1 -919 5227 4536 1675 112 4 12 chr2 44626415 44626664 -208629919 + AluSx SINE Alu 56 302 -10 2879 206 47 64 chr2 44626664 44626743 -208629840 - L1MB8 LINE L1 -1610 4536 4457 436 168 80 40 chr2 44626792 44626917 -208629666 - L1M4 LINE L1 -1556 4590 4461 2016 130 0 3 chr2 44626917 44627216 -208629367 - AluJb SINE Alu -14 298 1 940 241 20 63 chr2 44627217 44627612 -208628971 - L1M4 LINE L1 -2573 3573 3196 323 129 69 11 chr2 44627612 44627845 -208628738 + AluSq SINE Alu 1 301 0 189 0 0 0 chr2 44628036 44628057 -208628526 + (CTTAT)n Simple_repeat Simple_repeat 2 22 0 319 293 136 92 chr2 44628336 44628589 -208627994 + L3 LINE CR1 1186 1453 -124 744 177 0 8 chr2 44628589 44628719 -208627864 + FLAM_C SINE Alu 1 129 -4 319 293 136 92 chr2 44628719 44628738 -208627845 + L3 LINE CR1 1453 1470 -107 12622 168 13 10 chr2 44628749 44631345 -208625238 - L1 LINE L1 -1550 6015 3403 734 85 15 0 chr2 44631353 44631483 -208625100 - L1M1 LINE L1 -4028 3537 3406 1459 295 178 17 chr2 44631641 44632530 -208624053 + L2 LINE L2 2297 3310 -3 335 294 0 0 chr2 44632778 44632863 -208623720 - MER5A DNA MER1_type -2 187 103 228 261 68 23 chr2 44632801 44632889 -208623694 + MER5A DNA MER1_type 37 128 -61 * 275 329 0 0 chr2 44632929 44633005 -208623578 - MER81 DNA DNA -38 76 1 275 343 133 5 chr2 44633181 44633391 -208623192 - MIR SINE MIR -6 256 20 24 53 0 0 chr2 44633527 44633565 -208623018 + AT_rich Low_complexity Low_complexity 1 38 0 2282 100 0 0 chr2 44633687 44633997 -208622586 - AluSg SINE Alu 0 310 1 2254 90 0 7 chr2 44634149 44634448 -208622135 - AluSg SINE Alu -13 297 1 2237 93 0 3 chr2 44635701 44636003 -208620580 - AluSc SINE Alu -8 301 1 412 122 0 40 chr2 44637274 44637348 -208619235 + AluJb SINE Alu 62 132 -180 206 314 72 51 chr2 44637533 44637731 -208618852 + MIR3 SINE MIR 13 211 -51 1597 185 3 10 chr2 44639377 44639669 -208616914 - AluJo SINE Alu -22 290 1 210 71 0 0 chr2 44639855 44639883 -208616700 + (A)n Simple_repeat Simple_repeat 1 28 0 244 246 0 0 chr2 44640237 44640294 -208616289 + MIR SINE MIR 141 197 -65 1748 109 0 0 chr2 44640296 44640535 -208616048 - AluSx SINE Alu -21 291 53 6134 70 5 3 chr2 44640535 44641311 -208615272 + LTR17 LTR ERV1 3 780 0 222 246 31 46 chr2 44641427 44641492 -208615091 + MIR SINE MIR 199 262 0 775 271 64 13 chr2 44641634 44641870 -208614713 - MIR SINE MIR 0 262 15 1427 172 0 66 chr2 44642321 44642519 -208614064 - AluJb SINE Alu 0 314 143 2023 102 11 0 chr2 44642519 44642802 -208613781 + AluSg SINE Alu 5 290 -20 1427 172 0 66 chr2 44642802 44642935 -208613648 - AluJb SINE Alu -171 143 3 818 185 14 72 chr2 44643448 44643603 -208612980 - Zaphod DNA AcHobo -34 3997 3856 2014 104 0 7 chr2 44643603 44643915 -208612668 - AluSc SINE Alu 0 310 1 818 185 14 72 chr2 44643915 44643980 -208612603 - Zaphod DNA AcHobo -175 3856 3789 348 241 79 114 chr2 44644003 44644293 -208612290 + MLT1G-int LTR MaLR 1092 1371 0 590 196 77 42 chr2 44644376 44644544 -208612039 - Zaphod DNA AcHobo -259 3772 3599 535 277 92 57 chr2 44644587 44645111 -208611472 - MLT1F LTR MaLR 0 542 1 2150 108 0 3 chr2 44645388 44645694 -208610889 + AluSx SINE Alu 3 307 -5 466 252 113 0 chr2 44645977 44646092 -208610491 - FLAM_A SINE Alu -4 129 2 2223 115 0 0 chr2 44646345 44646650 -208609933 - AluSx SINE Alu -7 305 1 324 255 81 111 chr2 44646800 44647098 -208609485 + MLT1G-int LTR MaLR 1083 1371 0 776 263 53 69 chr2 44647100 44647485 -208609098 + MLT1G LTR MaLR 1 380 -210 310 197 84 151 chr2 44647481 44647528 -208609055 + MLT1F LTR MaLR 320 369 -173 * 1346 82 56 61 chr2 44647528 44647678 -208608905 + MER30 DNA MER1_type 1 151 -79 2318 105 0 0 chr2 44647678 44647991 -208608592 + AluSq SINE Alu 1 313 0 1346 82 56 61 chr2 44647991 44648071 -208608512 + MER30 DNA MER1_type 151 230 0 310 197 84 151 chr2 44648071 44648203 -208608380 + MLT1F LTR MaLR 369 482 -60 857 124 0 8 chr2 44648203 44648332 -208608251 - FLAM_C SINE Alu -5 128 1 310 197 84 151 chr2 44648332 44648390 -208608193 + MLT1F LTR MaLR 482 542 0 3227 192 55 62 chr2 44648390 44649249 -208607334 - Zaphod DNA AcHobo -3083 948 96 270 0 0 0 chr2 44649249 44649279 -208607304 + (TG)n Simple_repeat Simple_repeat 1 30 0 279 108 0 0 chr2 44649279 44649316 -208607267 - MER115 DNA AcHobo -656 37 1 412 216 164 0 chr2 44649462 44649596 -208606987 - MLT1K LTR MaLR 0 588 433 279 288 0 0 chr2 44650592 44650665 -208605918 + CT-rich Low_complexity Low_complexity 1 73 0 1618 149 83 4 chr2 44650738 44651014 -208605569 - AluJo SINE Alu -14 298 1 282 298 29 0 chr2 44651016 44651120 -208605463 + L1ME4a LINE L1 5818 5924 -197 342 0 0 0 chr2 44651186 44651224 -208605359 + (TA)n Simple_repeat Simple_repeat 2 39 0 1281 38 12 0 chr2 44651748 44651908 -208604675 - L1PA4 LINE L1 0 6155 5994 370 42 42 0 chr2 44653146 44653194 -208603389 - AluY SINE Alu -11 291 242 723 148 57 0 chr2 44653220 44653342 -208603241 - FRAM SINE Alu -47 129 1 1913 61 0 12 chr2 44655167 44655439 -208601144 - AluY SINE Alu 0 307 39 1706 176 4 0 chr2 44656771 44657050 -208599533 + AluJo SINE Alu 1 280 -32 216 0 0 0 chr2 44657052 44657076 -208599507 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 351 283 61 0 chr2 44657268 44657367 -208599216 - Charlie8 DNA MER1_type -2289 128 24 1765 143 35 3 chr2 44657415 44657701 -208598882 - AluJb SINE Alu -9 303 9 298 254 30 47 chr2 44658024 44658193 -208598390 - L2 LINE L2 -809 2505 2340 260 211 11 33 chr2 44658467 44658557 -208598026 + A-rich Low_complexity Low_complexity 5 92 0 349 291 33 26 chr2 44658779 44658930 -208597653 - L1ME3A LINE L1 -222 5948 5797 4618 153 5 12 chr2 44708930 44709749 -208546834 - L1MB7 LINE L1 -49 6135 5323 293 328 37 15 chr2 44709750 44709884 -208546699 - AluJb SINE Alu -9 293 157 959 118 0 15 chr2 44709936 44710093 -208546490 - FLAM_C SINE Alu 0 155 1 1114 210 94 6 chr2 44710093 44710421 -208546162 - L1ME3A LINE L1 -814 5332 4976 334 298 61 18 chr2 44710433 44710547 -208546036 - L1ME3A LINE L1 -2945 3201 3083 2387 192 80 29 chr2 44710582 44711206 -208545377 - L1M4 LINE L1 -1142 5004 4349 1102 281 137 19 chr2 44711884 44712314 -208544269 + MLT1J LTR MaLR 1 481 -30 210 37 0 0 chr2 44712333 44712360 -208544223 + (ATTG)n Simple_repeat Simple_repeat 2 28 0 1737 166 7 0 chr2 44712360 44712645 -208543938 - AluSx SINE Alu -22 290 1 578 327 29 11 chr2 44712673 44712945 -208543638 - L2 LINE L2 -1607 1707 1431 1106 153 0 0 chr2 44713092 44713262 -208543321 - FRAM SINE Alu -11 165 1 278 103 0 0 chr2 44713287 44713326 -208543257 + AluSx SINE Alu 1 39 -263 263 346 23 0 chr2 44713357 44713487 -208543096 + L2 LINE L2 916 1048 -2266 1544 117 42 8 chr2 44713603 44713842 -208542741 + AluSx SINE Alu 40 286 -26 2230 174 70 10 chr2 44713858 44714260 -208542323 + MSTB LTR MaLR 1 426 0 721 136 0 0 chr2 44714260 44714363 -208542220 - FLAM_C SINE Alu -29 114 12 2384 74 3 3 chr2 44714592 44714903 -208541680 - AluY SINE Alu 0 311 1 405 299 27 43 chr2 44714919 44715106 -208541477 - L1ME3A LINE L1 -204 5966 5783 439 340 174 17 chr2 44715112 44715826 -208540757 - L2 LINE L2 -2266 1048 223 834 128 0 0 chr2 44716732 44716849 -208539734 - FLAM_C SINE Alu -16 117 1 1338 237 124 34 chr2 44717437 44717906 -208538677 - MLT1J LTR MaLR 0 511 1 1244 143 12 75 chr2 44718082 44718118 -208538465 - AluJo SINE Alu -3 309 272 2014 115 10 20 chr2 44718118 44718422 -208538161 + AluSx SINE Alu 1 301 -11 1244 143 12 75 chr2 44718422 44718637 -208537946 - AluJo SINE Alu -40 272 74 28 29 0 0 chr2 44718981 44719016 -208537567 + AT_rich Low_complexity Low_complexity 1 35 0 244 295 143 0 chr2 44721269 44721381 -208535202 - MIR SINE MIR -45 217 90 357 279 7 14 chr2 44722114 44722254 -208534329 + (TG)n Simple_repeat Simple_repeat 1 139 0 528 77 0 0 chr2 44722591 44722669 -208533914 + (TC)n Simple_repeat Simple_repeat 2 79 0 1501 143 33 0 chr2 44722986 44723231 -208533352 - MLT1D LTR MaLR 0 505 253 1205 188 5 0 chr2 44723233 44723451 -208533132 + AluJb SINE Alu 87 305 -7 1191 152 36 5 chr2 44723476 44723700 -208532883 - MLT1D LTR MaLR -263 242 12 2289 194 60 12 chr2 44725098 44725578 -208531005 - MLT1D LTR MaLR -2 503 1 208 365 56 0 chr2 44726264 44726390 -208530193 + L2 LINE L2 2969 3101 -171 487 273 126 63 chr2 44726975 44727039 -208529544 + L2 LINE L2 2743 2802 -511 1906 122 0 4 chr2 44727039 44727307 -208529276 + AluSx SINE Alu 1 269 -43 225 0 0 0 chr2 44727307 44727332 -208529251 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 487 273 126 63 chr2 44727342 44727787 -208528796 + L2 LINE L2 2802 3279 -34 184 276 58 35 chr2 44727814 44727901 -208528682 - L2 LINE L2 -23 3249 3161 436 295 130 24 chr2 44728337 44728544 -208528039 + MIR SINE MIR 28 256 -6 304 252 7 122 chr2 44728656 44728728 -208527855 - MER5B DNA MER1_type -55 123 73 2099 111 3 19 chr2 44728728 44729044 -208527539 - AluSx SINE Alu -1 311 1 304 252 7 122 chr2 44729044 44729110 -208527473 - MER5B DNA MER1_type -105 73 1 234 247 25 12 chr2 44730023 44730104 -208526479 + MER5B DNA MER1_type 9 90 -88 1955 198 104 11 chr2 44730463 44730923 -208525660 + MLT1D LTR MaLR 2 504 -1 265 206 0 29 chr2 44731341 44731409 -208525174 + L2 LINE L2 2990 3055 -217 598 161 62 0 chr2 44731498 44731628 -208524955 + Tigger7 DNA MER2_type 2233 2370 -121 1572 184 61 0 chr2 44731889 44732167 -208524416 + Tigger7 DNA MER2_type 154 448 -285 336 154 9 118 chr2 44732169 44732213 -208524370 + L1ME4a LINE L1 5787 5834 -287 1657 187 0 9 chr2 44732213 44732528 -208524055 + AluJb SINE Alu 1 312 0 336 154 9 118 chr2 44732528 44732593 -208523990 + L1ME4a LINE L1 5834 5884 -237 1437 132 28 24 chr2 44732640 44732891 -208523692 + Tigger7 DNA MER2_type 2238 2489 -2 843 258 128 57 chr2 44732928 44733007 -208523576 + L1ME4a LINE L1 5589 5661 -460 2280 83 3 25 chr2 44733007 44733321 -208523262 + AluSp SINE Alu 1 307 -6 843 258 128 57 chr2 44733321 44733718 -208522865 + L1ME4a LINE L1 5661 6099 -22 1720 140 62 4 chr2 44734372 44734644 -208521939 + AluSx SINE Alu 1 288 -24 2162 101 13 3 chr2 44735042 44735348 -208521235 - AluSp SINE Alu -4 309 1 615 298 57 20 chr2 44735361 44735660 -208520923 - L1ME4a LINE L1 -197 5924 5615 384 302 81 12 chr2 44737380 44737552 -208519031 + L2 LINE L2 2397 2580 -734 2235 119 0 0 chr2 44738166 44738478 -208518105 - AluSx SINE Alu 0 312 1 204 146 24 0 chr2 44738543 44738584 -208517999 + (TG)n Simple_repeat Simple_repeat 1 42 0 234 327 180 0 chr2 44738798 44738948 -208517635 - MIR3 SINE MIR -2 206 30 253 346 39 0 chr2 44739683 44739839 -208516744 - L2 LINE L2 -213 3059 2898 2216 93 0 0 chr2 44739870 44740189 -208516394 + AluSx SINE Alu 1 319 0 1453 183 0 22 chr2 44742176 44742449 -208514134 - AluJo SINE Alu -8 304 38 384 245 47 9 chr2 44742572 44742678 -208513905 - MER103 DNA DNA -55 111 2 1712 154 0 69 chr2 44742695 44742860 -208513723 - AluSx SINE Alu -16 296 162 351 0 0 0 chr2 44742860 44742899 -208513684 + (TA)n Simple_repeat Simple_repeat 2 40 0 1712 154 0 69 chr2 44742899 44743051 -208513532 - AluSx SINE Alu -150 162 1 207 284 45 0 chr2 44743384 44743451 -208513132 + MIR SINE MIR 67 136 -72 321 203 0 0 chr2 44743792 44743851 -208512732 - L2 LINE L2 0 3272 3214 729 33 0 0 chr2 44744138 44744230 -208512353 + (TC)n Simple_repeat Simple_repeat 1 92 0 1368 125 15 0 chr2 44744510 44744710 -208511873 - L1PB3 LINE L1 0 6154 5952 2426 75 0 0 chr2 44745421 44745727 -208510856 - AluSx SINE Alu -6 306 1 2096 102 27 0 chr2 44745842 44746136 -208510447 - AluSq SINE Alu -11 302 1 313 299 44 15 chr2 44746347 44746484 -208510099 - MER117 DNA MER1_type -4 193 53 317 274 10 39 chr2 44746502 44746604 -208509979 - MIR3 SINE MIR -29 179 81 190 301 112 21 chr2 44747132 44747275 -208509308 + L2 LINE L2 2933 3088 -184 215 209 0 0 chr2 44747894 44747937 -208508646 + G-rich Low_complexity Low_complexity 2 44 0 206 347 53 0 chr2 44748365 44748460 -208508123 + MIR SINE MIR 30 129 -79 231 270 30 40 chr2 44748861 44748961 -208507622 + MIR SINE MIR 163 261 -1 1650 181 30 3 chr2 44749051 44749355 -208507228 + AluJo SINE Alu 1 312 0 1376 239 79 75 chr2 44749445 44749988 -208506595 - MLT1H LTR MaLR 0 549 5 214 290 65 0 chr2 44750124 44750186 -208506397 - L3 LINE CR1 -17 1560 1495 317 321 131 18 chr2 44750206 44750427 -208506156 - L3 LINE CR1 -251 1326 1081 1209 218 135 16 chr2 44750727 44751104 -208505479 - L1ME3 LINE L1 0 6162 5741 959 234 119 18 chr2 44751103 44751381 -208505202 + L1ME LINE L1 5416 5721 -441 * 466 316 58 0 chr2 44751451 44751625 -208504958 - L1ME3 LINE L1 -402 5719 5536 1014 222 112 46 chr2 44753043 44753453 -208503130 - LTR16A1 LTR ERVL -17 440 4 283 241 7 0 chr2 44754139 44754204 -208502379 - MER91 DNA MER1_type -3 187 127 199 253 30 111 chr2 44754974 44755073 -208501510 - MER5B DNA MER1_type -87 91 1 793 288 56 0 chr2 44756476 44756691 -208499892 - MIR SINE MIR -31 231 5 1523 263 101 21 chr2 44756777 44757242 -208499341 - MLT1G1 LTR MaLR 0 595 67 2462 73 0 6 chr2 44757242 44757557 -208499026 + AluSp SINE Alu 1 313 0 1523 263 101 21 chr2 44757557 44757630 -208498953 - MLT1G1 LTR MaLR -528 67 1 428 292 88 12 chr2 44757732 44757903 -208498680 - MIR SINE MIR -10 252 69 5721 166 91 64 chr2 44758308 44759070 -208497513 - L1MC3 LINE L1 0 7995 7254 2058 103 0 3 chr2 44759070 44759352 -208497231 - AluSg SINE Alu -16 294 14 5721 166 91 64 chr2 44759352 44759818 -208496765 - L1MC3 LINE L1 -741 7254 6802 10623 28 5 110 chr2 44759827 44761376 -208495207 - SVA Other Other 0 1386 1 341 45 0 90 chr2 44761376 44761433 -208495150 - AluSp/q SINE Alu -8 295 243 5721 166 91 64 chr2 44761433 44761995 -208494588 - L1MC3 LINE L1 -1193 6802 6000 373 320 7 47 chr2 44762037 44762206 -208494377 - MIR SINE MIR -46 216 56 553 311 40 0 chr2 44762340 44762488 -208494095 + MIR3 SINE MIR 43 196 -12 236 250 115 40 chr2 44762772 44762920 -208493663 - MER112 DNA MER1_type -60 200 42 427 291 36 37 chr2 44762955 44763155 -208493428 - MIR SINE MIR -44 164 11 369 309 133 54 chr2 44764100 44764182 -208492401 + L2 LINE L2 2997 3071 -242 2371 82 3 0 chr2 44764182 44764487 -208492096 - AluSx SINE Alu -6 306 1 369 309 133 54 chr2 44764487 44764672 -208491911 + L2 LINE L2 3071 3291 -22 198 103 0 0 chr2 44764672 44764701 -208491882 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 369 309 133 54 chr2 44764701 44764726 -208491857 + L2 LINE L2 3291 3313 0 2148 132 0 0 chr2 44765460 44765771 -208490812 + AluSx SINE Alu 1 311 -1 1725 210 69 15 chr2 44765771 44766251 -208490332 - L1ME3A LINE L1 -301 5869 5364 335 252 153 9 chr2 44766478 44766589 -208489994 + MIR SINE MIR 63 189 -73 1105 214 9 18 chr2 44767605 44767829 -208488754 - MER58A DNA MER1_type -2 222 1 1784 321 27 31 chr2 44767839 44768477 -208488106 + MER110-int LTR ERV1 2021 2655 -1992 2185 104 7 0 chr2 44768532 44768839 -208487744 - AluY SINE Alu -2 309 1 319 236 11 45 chr2 44769848 44769937 -208486646 - MIR3 SINE MIR -13 195 110 200 320 26 51 chr2 44770059 44770215 -208486368 - L2 LINE L2 -1 3312 3161 526 221 27 34 chr2 44771108 44771257 -208485326 - MARNA DNA Mariner -128 458 311 278 360 86 0 chr2 44771298 44771437 -208485146 - L2 LINE L2 -8 3305 3155 821 256 52 28 chr2 44771598 44771848 -208484735 - MIR SINE MIR 0 262 7 427 295 13 13 chr2 44771950 44772099 -208484484 + L1ME LINE L1 5538 5686 -435 347 253 11 0 chr2 44772103 44772190 -208484393 + L1ME LINE L1 5732 5819 -302 210 250 0 0 chr2 44772763 44772807 -208483776 + (TG)n Simple_repeat Simple_repeat 1 44 0 1782 72 5 0 chr2 44772952 44773175 -208483408 + AluSp SINE Alu 2 225 -88 841 81 0 0 chr2 44773175 44773286 -208483297 + AluSp/q SINE Alu 188 298 -15 181 243 0 100 chr2 44773511 44773581 -208483002 - MIR3 SINE MIR -12 196 134 427 333 85 38 chr2 44775693 44776221 -208480362 + L2 LINE L2 2422 2974 -340 206 175 0 0 chr2 44776754 44776794 -208479789 - L2 LINE L2 -1 3312 3273 1565 154 0 19 chr2 44776794 44777060 -208479523 + AluJo SINE Alu 15 275 -37 289 310 26 35 chr2 44777143 44777259 -208479324 - L2 LINE L2 -265 3048 2934 200 289 39 58 chr2 44777260 44777364 -208479219 + MIR SINE MIR 91 192 -70 257 200 0 0 chr2 44777505 44777545 -208479038 + MER4B LTR ERV1 499 538 -72 213 39 0 0 chr2 44777546 44777572 -208479011 + (A)n Simple_repeat Simple_repeat 1 26 0 187 302 0 16 chr2 44777784 44777847 -208478736 + L2 LINE L2 3250 3311 -2 342 0 0 0 chr2 44778600 44778638 -208477945 + (GA)n Simple_repeat Simple_repeat 2 39 0 255 61 0 0 chr2 44781169 44781202 -208475381 + (TG)n Simple_repeat Simple_repeat 1 33 0 2424 68 0 3 chr2 44783954 44784265 -208472318 - AluSx SINE Alu 0 312 3 191 214 83 48 chr2 44784806 44784890 -208471693 - MER5A DNA MER1_type -76 113 27 542 237 135 0 chr2 44786412 44786497 -208470086 - MER5A DNA MER1_type -12 177 105 1525 181 3 72 chr2 44786497 44786828 -208469755 - AluJo SINE Alu -4 308 1 542 237 135 0 chr2 44786828 44786898 -208469685 - MER5A DNA MER1_type -84 105 1 368 282 61 49 chr2 44786898 44787016 -208469567 - MIR3 SINE MIR -56 152 33 1463 68 5 0 chr2 44788475 44788665 -208467918 - L1PA14 LINE L1 0 6161 5971 1935 149 7 0 chr2 44788764 44789065 -208467518 + AluSx SINE Alu 1 303 -9 513 278 82 27 chr2 44790223 44790441 -208466142 - MIR SINE MIR 0 262 42 2125 101 0 35 chr2 44791527 44791844 -208464739 + AluSx SINE Alu 1 306 -6 746 289 22 22 chr2 44792159 44792391 -208464192 + MIR SINE MIR 10 241 -21 716 113 157 0 chr2 44792603 44792718 -208463865 - FLAM_C SINE Alu 0 133 1 604 233 96 0 chr2 44793089 44793235 -208463348 + MLT1J LTR MaLR 3 162 -349 830 244 15 15 chr2 44793283 44793488 -208463095 + MIR SINE MIR 26 230 -32 683 269 116 19 chr2 44793546 44793762 -208462821 + MLT1J LTR MaLR 275 511 0 485 291 67 43 chr2 44793991 44794030 -208462553 - MIR SINE MIR 0 262 225 1363 201 74 14 chr2 44794030 44794314 -208462269 - AluJb SINE Alu -11 301 1 485 291 67 43 chr2 44794314 44794382 -208462201 - MIR SINE MIR -37 225 160 2029 131 23 45 chr2 44794382 44794734 -208461849 - MER2 DNA MER2_type 0 344 1 485 291 67 43 chr2 44794734 44794835 -208461748 - MIR SINE MIR -102 160 48 213 175 0 0 chr2 44795406 44795446 -208461137 + C-rich Low_complexity Low_complexity 5 44 0 223 308 26 13 chr2 44795733 44795811 -208460772 + L3 LINE CR1 1483 1561 -16 2204 96 3 10 chr2 44796586 44796898 -208459685 + AluSp SINE Alu 4 313 0 1933 151 0 0 chr2 44797478 44797789 -208458794 - AluSx SINE Alu -1 311 1 892 197 48 9 chr2 44797825 44798053 -208458530 - Charlie5 DNA MER1_type 0 2624 2388 2334 55 6 13 chr2 44799413 44799725 -208456858 + AluY SINE Alu 1 310 -1 213 337 40 50 chr2 44799725 44799826 -208456757 - MIR3 SINE MIR -8 200 101 781 243 54 27 chr2 44800306 44800565 -208456018 - L2 LINE L2 0 3313 3048 247 237 54 0 chr2 44800621 44800708 -208455875 - MIR3 SINE MIR -8 200 105 894 247 162 36 chr2 44800857 44801245 -208455338 + MLT1J2 LTR MaLR 14 450 0 192 333 0 0 chr2 44801351 44801405 -208455178 - MIR3 SINE MIR -37 171 118 770 281 97 40 chr2 44801494 44801845 -208454738 + MLT1K LTR MaLR 140 520 -68 2314 71 3 0 chr2 44801845 44802141 -208454442 - AluY SINE Alu -14 297 1 770 281 97 40 chr2 44802141 44802212 -208454371 + MLT1K LTR MaLR 520 586 -2 219 235 161 12 chr2 44802213 44802294 -208454289 - L2 LINE L2 -6 3307 3215 309 256 78 11 chr2 44803416 44803506 -208453077 - MLT1K LTR MaLR -339 249 154 337 297 30 0 chr2 44803507 44803608 -208452975 - MIR SINE MIR -71 191 88 312 244 0 13 chr2 44803762 44803840 -208452743 + MLT1L LTR MaLR 322 398 -217 1086 65 0 0 chr2 44803908 44804046 -208452537 - AluY SINE Alu -14 297 160 252 253 89 0 chr2 44804047 44804126 -208452457 + MLT1L LTR MaLR 507 592 -23 184 261 29 29 chr2 44804742 44804811 -208451772 - MIR3 SINE MIR -134 74 6 525 243 83 35 chr2 44804828 44804997 -208451586 + MER63A DNA MER1_type 29 205 -5 2229 108 82 18 chr2 44805392 44805734 -208450849 + THE1B LTR MaLR 1 364 0 316 313 96 100 chr2 44806157 44806387 -208450196 + L2 LINE L2 3018 3246 -26 2148 107 3 13 chr2 44806773 44807082 -208449501 + AluSx SINE Alu 1 306 -6 1632 159 74 0 chr2 44807138 44807409 -208449174 - AluJb SINE Alu -14 298 8 809 160 0 0 chr2 44807424 44807549 -208449034 - FLAM_C SINE Alu -18 125 1 330 303 148 7 chr2 44808201 44808343 -208448240 + MIR SINE MIR 35 196 -66 2338 90 0 0 chr2 44808435 44808734 -208447849 - AluSg SINE Alu -11 299 1 294 295 0 16 chr2 44809083 44809205 -208447378 + CT-rich Low_complexity Low_complexity 2 121 0 1351 75 0 0 chr2 44809405 44809578 -208447005 + AluY SINE Alu 124 296 -15 448 335 114 13 chr2 44809599 44809835 -208446748 - L1MC4a LINE L1 -1736 6072 5813 457 259 50 14 chr2 44809887 44810026 -208446557 - MIR SINE MIR -35 227 84 2219 107 0 3 chr2 44810096 44810396 -208446187 - AluSx SINE Alu -12 300 2 409 298 23 76 chr2 44811448 44811619 -208444964 - MIR SINE MIR -1 261 100 327 307 15 15 chr2 44811822 44811959 -208444624 + CT-rich Low_complexity Low_complexity 1 137 0 1645 120 47 8 chr2 44811972 44812230 -208444353 - AluJb SINE Alu -34 278 11 271 236 28 14 chr2 44816226 44816298 -208440285 + CT-rich Low_complexity Low_complexity 1 73 0 297 175 35 0 chr2 44816506 44816563 -208440020 + MER5A DNA MER1_type 131 189 0 790 205 0 67 chr2 44816996 44817099 -208439484 + MER3 DNA MER1_type 14 97 -112 2228 107 0 10 chr2 44817099 44817409 -208439174 + AluSx SINE Alu 1 307 -5 790 205 0 67 chr2 44817409 44817515 -208439068 + MER3 DNA MER1_type 97 209 0 208 342 117 0 chr2 44817600 44817720 -208438863 - MIR3 SINE MIR -63 145 12 899 216 23 6 chr2 44818154 44818325 -208438258 - MER45A DNA AcHobo -4 174 1 1219 158 15 10 chr2 44818378 44818581 -208438002 + AluJo SINE Alu 36 239 -73 407 298 24 8 chr2 44818811 44818935 -208437648 - MIR SINE MIR 0 262 137 624 186 14 21 chr2 44818944 44819084 -208437499 + L1ME2 LINE L1 6017 6155 -9 204 284 62 12 chr2 44819124 44819205 -208437378 - MIR SINE MIR -136 126 42 426 253 0 0 chr2 44819285 44819372 -208437211 + MIR SINE MIR 92 178 -84 2301 91 3 7 chr2 44819727 44820034 -208436549 + AluSp SINE Alu 1 306 -7 2245 103 7 0 chr2 44820046 44820348 -208436235 + AluSx SINE Alu 1 304 -8 737 188 8 8 chr2 44820461 44820594 -208435989 + FLAM_C SINE Alu 1 133 0 229 297 156 0 chr2 44820712 44820840 -208435743 + L2 LINE L2 3161 3308 -5 446 268 37 7 chr2 44821060 44821232 -208435351 - MIR3 SINE MIR -65 143 2 300 337 10 10 chr2 44822105 44822203 -208434380 - L2 LINE L2 0 3272 3175 781 294 92 21 chr2 44822280 44822998 -208433585 - L2 LINE L2 -23 3290 2523 234 371 60 0 chr2 44823503 44823670 -208432913 - L2 LINE L2 -942 2372 2196 2086 113 3 26 chr2 44823674 44823983 -208432600 + AluSg SINE Alu 1 302 -8 2305 101 3 0 chr2 44824870 44825177 -208431406 + AluSp SINE Alu 1 308 -5 341 310 29 9 chr2 44825532 44825683 -208430900 - L1 LINE L1 -2963 3183 3042 1673 201 54 13 chr2 44825896 44826285 -208430298 - MLT1F LTR MaLR -8 534 130 2114 121 0 29 chr2 44826290 44826431 -208430152 + AluSx SINE Alu 1 145 -167 2228 113 3 0 chr2 44826431 44826742 -208429841 + AluSq SINE Alu 1 312 -1 2114 121 0 29 chr2 44826742 44826913 -208429670 + AluSx SINE Alu 145 304 -8 180 0 0 0 chr2 44827427 44827447 -208429136 + (TTCA)n Simple_repeat Simple_repeat 2 21 0 228 232 130 0 chr2 44827456 44827525 -208429058 - L2 LINE L2 -52 3220 3143 706 133 9 0 chr2 44828917 44829022 -208427561 - AluJb SINE Alu -29 283 178 1217 121 0 16 chr2 44829069 44829259 -208427324 + AluJb SINE Alu 120 306 -6 397 123 0 37 chr2 44829353 44829434 -208427149 + (GGAA)n Simple_repeat Simple_repeat 3 80 0 741 174 9 0 chr2 44829434 44829549 -208427034 - FLAM_C SINE Alu -16 117 2 22 0 0 0 chr2 44831551 44831573 -208425010 + GC_rich Low_complexity Low_complexity 1 22 0 589 265 32 58 chr2 44831751 44831940 -208424643 - MIR SINE MIR -9 253 70 241 182 0 0 chr2 44831955 44831999 -208424584 + L2 LINE L2 3268 3311 -2 2110 114 10 0 chr2 44832692 44832989 -208423594 + AluSx SINE Alu 1 300 -12 182 243 0 0 chr2 44833553 44833590 -208422993 - MIR SINE MIR -117 145 109 681 353 110 6 chr2 44835563 44835909 -208420674 + L3 LINE CR1 623 1004 -573 319 248 25 96 chr2 44835929 44835991 -208420592 + MER5A DNA MER1_type 16 81 -108 2761 10 0 0 chr2 44835991 44836298 -208420285 + AluYa5 SINE Alu 1 307 -4 319 248 25 96 chr2 44836298 44836392 -208420191 + MER5A DNA MER1_type 81 161 -28 363 259 187 22 chr2 44836793 44836932 -208419651 + MIR SINE MIR 84 245 -17 197 245 19 19 chr2 44836900 44836953 -208419630 + L2 LINE L2 3219 3271 -1 * 195 162 0 0 chr2 44836972 44837009 -208419574 + (TGGA)n Simple_repeat Simple_repeat 4 40 0 282 322 157 23 chr2 44837418 44837679 -208418904 - L2 LINE L2 -82 3190 2895 286 200 227 0 chr2 44838576 44838651 -208417932 + L2 LINE L2 3208 3299 -14 192 40 0 0 chr2 44838653 44838678 -208417905 + (TGAA)n Simple_repeat Simple_repeat 2 26 0 230 227 0 30 chr2 44838685 44838751 -208417832 + (CATA)n Simple_repeat Simple_repeat 1 64 0 330 246 61 35 chr2 44839352 44839466 -208417117 + MIR SINE MIR 14 130 -132 1893 169 7 0 chr2 44839594 44839902 -208416681 - AluJb SINE Alu -2 310 1 2140 104 7 0 chr2 44840116 44840404 -208416179 + AluSx SINE Alu 1 290 -22 1762 240 58 17 chr2 44840404 44840938 -208415645 + L1ME3 LINE L1 5591 6146 -16 302 374 24 24 chr2 44842258 44842381 -208414202 - MIR SINE MIR -92 170 48 377 252 77 71 chr2 44842514 44842669 -208413914 + MIR SINE MIR 6 161 -47 2215 75 7 20 chr2 44843120 44843426 -208413157 + AluY SINE Alu 1 302 -9 642 281 121 22 chr2 44844149 44844373 -208412210 - MIR SINE MIR -5 257 12 285 269 73 44 chr2 44844933 44845112 -208411471 - MIR SINE MIR -1 207 25 231 328 62 40 chr2 44846815 44846992 -208409591 - MIR3 SINE MIR -27 181 1 1984 198 82 86 chr2 44847703 44848328 -208408255 - MLT1E2 LTR MaLR 0 626 5 210 71 0 0 chr2 44848489 44848517 -208408066 + (TCC)n Simple_repeat Simple_repeat 2 29 0 263 303 10 40 chr2 44848831 44848930 -208407653 + L2 LINE L2 3164 3259 -13 2097 114 27 0 chr2 44849307 44849604 -208406979 - AluSx SINE Alu -7 305 1 834 258 76 20 chr2 44850363 44850665 -208405918 - L1ME3 LINE L1 -1 6161 5843 236 279 151 12 chr2 44850760 44850846 -208405737 - MIR SINE MIR -118 144 47 350 206 0 0 chr2 44851155 44851218 -208405365 - L2 LINE L2 0 3313 3251 508 258 62 147 chr2 44851222 44851758 -208404825 - MLT1H1 LTR MaLR -2 553 64 372 300 0 39 chr2 44851970 44852100 -208404483 - MIR SINE MIR -5 257 133 855 261 79 71 chr2 44852100 44852424 -208404159 - MLT1H1 LTR MaLR -3 549 232 2210 97 0 13 chr2 44852424 44852722 -208403861 - AluSq SINE Alu -19 294 1 855 261 79 71 chr2 44852722 44852947 -208403636 - MLT1H1 LTR MaLR -320 232 10 369 261 30 173 chr2 44852957 44853208 -208403375 - MLT1H1-int LTR MaLR 0 1371 1218 2182 122 0 0 chr2 44853208 44853512 -208403071 + AluSq SINE Alu 1 304 -9 369 261 30 173 chr2 44853512 44853735 -208402848 - MLT1H1-int LTR MaLR -153 1218 965 2311 103 57 17 chr2 44853788 44854138 -208402445 + THE1B LTR MaLR 1 364 0 274 375 8 0 chr2 44854204 44854332 -208402251 - MLT1H1-int LTR MaLR -487 884 756 823 96 0 0 chr2 44854490 44854594 -208401989 - U6 snRNA snRNA -3 104 1 2183 127 0 0 chr2 44854995 44855303 -208401280 - AluSx SINE Alu -4 308 1 262 264 69 0 chr2 44855481 44855568 -208401015 - MLT1H1-int LTR MaLR -1269 102 10 960 264 105 44 chr2 44855585 44856081 -208400502 - MLT1H1 LTR MaLR -5 550 25 464 289 8 8 chr2 44856093 44856214 -208400369 - MIR SINE MIR -140 122 2 182 293 53 75 chr2 44856281 44856414 -208400169 + MIR SINE MIR 90 219 -43 2274 122 3 3 chr2 44856615 44856927 -208399656 - AluSx SINE Alu 0 312 1 619 288 0 31 chr2 44857239 44857399 -208399184 + MER91A DNA MER1_type 2 156 -40 218 333 48 0 chr2 44857404 44857467 -208399116 + MER91A DNA MER1_type 127 192 -4 409 251 109 49 chr2 44860077 44860260 -208396323 - MIR SINE MIR -37 225 32 382 214 250 0 chr2 44861021 44861161 -208395422 + MIR SINE MIR 18 192 -70 593 276 49 6 chr2 44862088 44862251 -208394332 + MLT1J LTR MaLR 1 170 -341 1627 162 42 74 chr2 44862251 44862391 -208394192 - MLT1A1 LTR MaLR 0 365 222 2295 90 10 22 chr2 44862391 44862703 -208393880 - AluSq SINE Alu -5 308 1 1627 162 42 74 chr2 44862703 44862806 -208393777 - MLT1A1 LTR MaLR -143 222 117 2284 165 23 46 chr2 44862806 44863062 -208393521 - MSTB LTR MaLR 0 426 182 1494 39 0 17 chr2 44863062 44863265 -208393318 + AluY SINE Alu 105 304 0 2284 165 23 46 chr2 44863265 44863443 -208393140 - MSTB LTR MaLR -244 182 1 1627 162 42 74 chr2 44863443 44863575 -208393008 - MLT1A1 LTR MaLR -248 117 1 511 262 123 40 chr2 44863627 44863879 -208392704 + MLT1J LTR MaLR 239 511 0 3470 121 44 22 chr2 44863949 44864534 -208392049 + MER4B LTR ERV1 9 606 -4 731 254 174 15 chr2 44865737 44866149 -208390434 + MLT1J LTR MaLR 1 436 -14 249 274 34 89 chr2 44866253 44866490 -208390093 - L2 LINE L2 -202 3070 2847 1871 147 7 3 chr2 44866579 44866864 -208389719 - AluJo SINE Alu -15 297 12 2501 84 0 0 chr2 44866901 44867211 -208389372 + AluY SINE Alu 1 310 -1 2963 180 18 50 chr2 44867572 44868135 -208388448 - L1ME1 LINE L1 -5 6161 5626 2255 99 17 0 chr2 44868135 44868429 -208388154 - AluSp SINE Alu -14 299 1 2963 180 18 50 chr2 44868429 44868608 -208387975 - L1ME1 LINE L1 -540 5626 5443 1614 208 0 7 chr2 44868664 44868953 -208387630 - AluJo SINE Alu -25 287 1 831 164 8 0 chr2 44868964 44869098 -208387485 - AluJo SINE Alu -176 136 2 1428 132 5 0 chr2 44869107 44869319 -208387264 - AluSq SINE Alu -10 303 91 1870 202 62 28 chr2 44869322 44869543 -208387040 - L1ME1 LINE L1 -1009 5137 4925 1951 144 16 23 chr2 44869543 44869849 -208386734 - AluJb SINE Alu -8 304 1 1870 202 62 28 chr2 44869849 44870128 -208386455 - L1ME1 LINE L1 -1221 4925 4620 238 241 65 9 chr2 44870122 44870230 -208386353 - L1ME4a LINE L1 -24 6097 5984 * 41547 34 22 1 chr2 44870265 44876292 -208380291 + L1PA3 LINE L1 2 6153 -2 4060 198 32 5 chr2 44876365 44877237 -208379346 - L1ME1 LINE L1 -5 6161 5266 771 255 77 14 chr2 44877285 44877493 -208379090 - MIR SINE MIR -40 222 2 2036 134 0 0 chr2 44877613 44877946 -208378637 - AluSx SINE Alu 0 312 1 1345 192 76 143 chr2 44877950 44878128 -208378455 - Charlie7 DNA MER1_type -358 2254 2066 2374 94 0 3 chr2 44878128 44878436 -208378147 - AluY SINE Alu -4 307 1 1345 192 76 143 chr2 44878436 44878535 -208378048 - Charlie7 DNA MER1_type -546 2066 1962 2350 68 0 0 chr2 44878535 44878844 -208377739 - AluY SINE Alu 0 309 1 1345 192 76 143 chr2 44878844 44878945 -208377638 - Charlie7 DNA MER1_type -650 1962 1856 2295 65 0 31 chr2 44878945 44879258 -208377325 - AluY SINE Alu 0 304 1 1345 192 76 143 chr2 44879258 44879586 -208376997 - Charlie7 DNA MER1_type -756 1856 1591 225 246 18 0 chr2 44879837 44879894 -208376689 - Charlie7 DNA MER1_type -2420 192 135 279 79 0 0 chr2 44880918 44880956 -208375627 + (TG)n Simple_repeat Simple_repeat 1 38 0 189 348 29 0 chr2 44882076 44882145 -208374438 - L2 LINE L2 0 3313 3243 452 137 0 0 chr2 44882360 44882433 -208374150 - MER53 DNA DNA -116 73 1 374 234 107 148 chr2 44882435 44882726 -208373857 - L2 LINE L2 -23 3249 2971 426 280 17 19 chr2 44883208 44883359 -208373224 + MIR SINE MIR 5 151 -57 1669 169 37 70 chr2 44884085 44884271 -208372312 + MLT1B LTR MaLR 1 191 -199 2253 109 0 16 chr2 44884271 44884582 -208372001 - AluSg SINE Alu -4 306 1 1669 169 37 70 chr2 44884582 44884798 -208371785 + MLT1B LTR MaLR 191 390 0 2335 123 0 0 chr2 44884929 44885277 -208371306 - AluSx SINE Alu 0 348 1 230 333 113 16 chr2 44885649 44885841 -208370742 - MIR SINE MIR -43 219 11 620 214 8 30 chr2 44888064 44888195 -208368388 + MIR SINE MIR 31 158 -104 2538 190 14 16 chr2 44888681 44889186 -208367397 - MLT1F LTR MaLR 0 542 39 231 203 0 0 chr2 44889624 44889688 -208366895 + (TTCA)n Simple_repeat Simple_repeat 2 65 0 288 239 87 33 chr2 44889734 44889826 -208366757 - L2 LINE L2 -3 3310 3214 2325 128 0 43 chr2 44890270 44890646 -208365937 + MER1A DNA MER1_type 1 360 -169 256 93 47 0 chr2 44890822 44890865 -208365718 + MLT1L LTR MaLR 215 259 -356 765 271 89 35 chr2 44890966 44891335 -208365248 + LTR16A LTR ERVL 56 444 -6 451 324 64 10 chr2 44891352 44891556 -208365027 + MLT1J LTR MaLR 295 509 -2 1447 206 3 7 chr2 44942416 44942722 -208313861 - AluSq SINE Alu -8 305 1 2230 98 7 10 chr2 44942782 44943088 -208313495 - AluSx SINE Alu -7 305 1 1575 162 80 24 chr2 44943210 44943549 -208313034 - MER46B DNA MER2_type -3 233 1 5142 78 42 9 chr2 44943848 44944519 -208312064 - SVA Other Other 0 1386 694 1911 174 3 0 chr2 44944832 44945142 -208311441 + MER47B DNA MER2_type 104 414 -4 198 0 0 0 chr2 44945142 44945164 -208311419 + (TG)n Simple_repeat Simple_repeat 1 22 0 * 261 0 0 0 chr2 44945163 44945192 -208311391 + (GA)n Simple_repeat Simple_repeat 1 29 0 1385 178 41 85 chr2 44945194 44945560 -208311023 - MLT2D LTR ERVL -64 350 1 889 152 61 6 chr2 44945695 44945860 -208310723 - MLT1H1 LTR MaLR 0 555 382 239 265 20 61 chr2 44945932 44946030 -208310553 - MLT1H1 LTR MaLR -285 310 217 2251 47 0 4 chr2 44946440 44946697 -208309886 - AluY SINE Alu -24 287 32 198 0 0 0 chr2 44947343 44947365 -208309218 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 225 0 0 0 chr2 44947364 44947389 -208309194 + (CA)n Simple_repeat Simple_repeat 1 25 0 2035 87 77 21 chr2 44949866 44950152 -208306431 + AluSp SINE Alu 1 302 -11 450 280 104 21 chr2 44950154 44950347 -208306236 - MIR SINE MIR -10 252 44 2215 123 0 16 chr2 44950758 44951074 -208305509 + AluSp SINE Alu 2 312 -1 2338 103 0 31 chr2 44951110 44951431 -208305152 - AluY SINE Alu 0 311 1 239 314 83 0 chr2 44951547 44951668 -208304915 - MIR3 SINE MIR -65 143 13 2262 121 0 7 chr2 44951785 44952090 -208304493 + AluSq SINE Alu 1 303 -10 312 27 0 0 chr2 44952940 44952977 -208303606 + (CA)n Simple_repeat Simple_repeat 2 38 0 184 279 108 27 chr2 44953894 44954005 -208302578 + L2 LINE L2 3190 3309 -4 2367 95 3 0 chr2 44954210 44954506 -208302077 - AluSc SINE Alu -12 297 1 310 357 8 8 chr2 44954517 44954643 -208301940 + L2 LINE L2 2662 2787 -527 275 216 176 0 chr2 44954777 44954851 -208301732 + MIR SINE MIR 109 195 -67 1853 151 22 0 chr2 44954855 44955170 -208301413 - AluJb SINE Alu 0 321 1 358 185 0 0 chr2 44955197 44955262 -208301321 - MER2 DNA MER2_type 0 345 281 2215 122 0 10 chr2 44955698 44956029 -208300554 + AluSq SINE Alu 1 313 0 2233 116 6 31 chr2 44957715 44958035 -208298548 - AluSx SINE Alu 0 312 1 787 111 4 217 chr2 44960487 44960517 -208296066 - MER2 DNA MER2_type -139 206 171 1700 192 0 7 chr2 44960517 44960819 -208295764 + AluJo SINE Alu 3 302 -10 787 111 4 217 chr2 44960819 44961023 -208295560 - MER2 DNA MER2_type -174 171 22 220 274 57 19 chr2 44961310 44961416 -208295167 + L2 LINE L2 2970 3079 -193 675 253 48 5 chr2 44962660 44962846 -208293737 + MIR SINE MIR 18 211 -51 2210 108 0 40 chr2 44962863 44963188 -208293395 - AluSx SINE Alu 0 312 1 182 156 22 0 chr2 44963310 44963355 -208293228 + C-rich Low_complexity Low_complexity 3 48 0 418 318 50 6 chr2 44963703 44963882 -208292701 + MIR SINE MIR 40 226 -36 216 250 19 0 chr2 44963911 44963963 -208292620 + C-rich Low_complexity Low_complexity 1 53 0 606 308 131 32 chr2 44964279 44965177 -208291406 - L2 LINE L2 0 3272 2296 239 231 202 29 chr2 44965808 44965912 -208290671 + MIR SINE MIR 29 150 -58 418 324 22 5 chr2 44965956 44966141 -208290442 - MIR SINE MIR -11 251 64 203 365 108 18 chr2 44966429 44966596 -208289987 + MIR SINE MIR 78 259 -3 2278 107 3 0 chr2 44966597 44966895 -208289688 - AluSx SINE Alu -13 299 1 260 216 14 0 chr2 44967726 44967800 -208288783 + (CA)n Simple_repeat Simple_repeat 1 75 0 882 109 47 0 chr2 44968198 44968326 -208288257 + AluJo SINE Alu 1 134 -178 2322 91 10 7 chr2 44968819 44969128 -208287455 + AluSx SINE Alu 1 310 -2 351 314 16 0 chr2 44969220 44969344 -208287239 + MIR SINE MIR 46 171 -91 850 194 40 23 chr2 44970406 44970581 -208286002 + MER3 DNA MER1_type 1 131 -78 1720 76 9 0 chr2 44970717 44970928 -208285655 - AluSp SINE Alu -19 294 82 1554 128 4 8 chr2 44970943 44971178 -208285405 + AluSg/x SINE Alu 78 311 -1 210 312 86 21 chr2 44971192 44971285 -208285298 - MIR SINE MIR -151 111 13 205 345 0 0 chr2 44971630 44971685 -208284898 + MIR3 SINE MIR 109 163 -45 2267 101 3 13 chr2 44971688 44971994 -208284589 - AluSx SINE Alu -8 304 2 872 204 0 0 chr2 44972029 44972181 -208284402 - FRAM SINE Alu 0 176 25 1358 120 6 0 chr2 44972335 44972518 -208284065 - AluSx SINE Alu -116 196 13 2546 88 0 0 chr2 44973158 44973464 -208283119 + AluSx SINE Alu 1 306 -6 182 107 0 0 chr2 44973669 44973697 -208282886 - L2 LINE L2 -94 3219 3192 251 276 129 26 chr2 44973785 44973901 -208282682 + L2 LINE L2 2523 2650 -664 * 327 258 153 0 chr2 44973878 44974002 -208282581 + L2 LINE L2 2904 3046 -267 380 265 110 6 chr2 44974467 44974782 -208281801 + MLT1J2 LTR MaLR 5 382 -68 192 263 92 13 chr2 44975061 44975137 -208281446 + MIR SINE MIR 82 163 -99 308 230 0 90 chr2 44975206 44975306 -208281277 - MIR SINE MIR -105 157 67 845 304 58 45 chr2 44975313 44976195 -208280388 + L2 LINE L2 2371 3272 0 1244 171 55 126 chr2 44976257 44976383 -208280200 - MLT1B LTR MaLR 0 390 257 1982 107 17 17 chr2 44976383 44976674 -208279909 + AluSx SINE Alu 11 301 -11 1244 171 55 126 chr2 44976674 44976855 -208279728 - MLT1B LTR MaLR -133 257 118 2145 143 10 0 chr2 44976855 44977163 -208279420 - AluSx SINE Alu -1 311 1 1244 171 55 126 chr2 44977163 44977274 -208279309 - MLT1B LTR MaLR -272 118 1 2104 173 51 15 chr2 44977275 44977637 -208278946 - MLT1B-int LTR MaLR -1 1370 990 1989 130 0 25 chr2 44977637 44977921 -208278662 + AluJb SINE Alu 23 299 -13 2104 173 51 15 chr2 44977921 44977969 -208278614 - MLT1B-int LTR MaLR -381 990 945 394 214 0 12 chr2 44978108 44978192 -208278391 - MLT1B-int LTR MaLR -975 760 678 3861 153 45 14 chr2 44978249 44979021 -208277562 - MLT1-int LTR MaLR -484 887 1 336 115 0 0 chr2 44979021 44979073 -208277510 - MLT2B1 LTR ERVL 0 520 469 372 167 0 28 chr2 44979092 44979164 -208277419 + Tigger5 DNA MER2_type 7 76 -2247 1034 92 35 0 chr2 44979338 44979479 -208277104 - AluSg/x SINE Alu -14 298 153 432 67 89 100 chr2 44979554 44979644 -208276939 - MIR SINE MIR -89 173 85 693 178 46 33 chr2 44980033 44980185 -208276398 - MER5A DNA MER1_type -35 154 1 395 312 16 0 chr2 44980216 44980341 -208276242 - MER5B DNA MER1_type -49 129 3 225 314 71 50 chr2 44980605 44980745 -208275838 - L2 LINE L2 -30 3242 3100 268 280 193 7 chr2 44980840 44980990 -208275593 - MER5B DNA MER1_type 0 178 1 530 182 0 0 chr2 44981270 44981358 -208275225 - FLAM_A SINE Alu -51 91 4 985 200 0 0 chr2 44981965 44982135 -208274448 + FAM SINE Alu 1 170 -5 28 29 0 0 chr2 44982756 44982791 -208273792 + AT_rich Low_complexity Low_complexity 1 35 0 517 173 18 27 chr2 44983052 44983162 -208273421 - MER5A DNA MER1_type -69 120 12 2432 87 0 0 chr2 44983868 44984166 -208272417 - AluSx SINE Alu -14 298 1 195 39 176 0 chr2 44985077 44985128 -208271455 + CT-rich Low_complexity Low_complexity 1 60 0 * 283 117 0 33 chr2 44985125 44985185 -208271398 + (TCCC)n Simple_repeat Simple_repeat 3 60 0 1515 148 19 98 chr2 44985189 44985507 -208271076 - AluJb SINE Alu -19 293 1 2667 271 39 30 chr2 44986223 44987269 -208269314 + L1ME LINE L1 36 1091 -5305 708 167 9 0 chr2 44987270 44987384 -208269199 + FLAM_C SINE Alu 2 116 -27 441 285 89 9 chr2 44987397 44987611 -208268972 + L1ME LINE L1 1077 1307 -5089 1913 179 10 0 chr2 44987618 44987926 -208268657 + AluJo SINE Alu 1 311 -1 1505 220 44 50 chr2 44987926 44988421 -208268162 + L1ME LINE L1 4981 5472 -743 1150 165 102 8 chr2 44988446 44988700 -208267883 + L1ME LINE L1 5606 5883 -352 4338 196 53 22 chr2 44988711 44989393 -208267190 + L1MB7 LINE L1 3858 4517 -1667 207 0 0 0 chr2 44989393 44989416 -208267167 + (TCCC)n Simple_repeat Simple_repeat 4 26 0 4338 196 53 22 chr2 44989416 44990090 -208266493 + L1MB7 LINE L1 4517 5169 -1015 2395 93 3 0 chr2 44990090 44990391 -208266192 + AluSq SINE Alu 1 302 -11 4338 196 53 22 chr2 44990391 44990995 -208265588 + L1MB7 LINE L1 5169 5944 -240 339 123 4 0 chr2 44991095 44991158 -208265425 + Alu SINE Alu 1 46 -262 2362 98 3 0 chr2 44991753 44992049 -208264534 - AluSx SINE Alu -15 297 1 1494 169 44 44 chr2 44992114 44992410 -208264173 - AluJb SINE Alu -16 296 1 482 134 71 49 chr2 44993358 44993378 -208263205 - L1MC3 LINE L1 0 7785 7767 1962 154 34 3 chr2 44993378 44993676 -208262907 + AluJb SINE Alu 2 308 -4 482 134 71 49 chr2 44993676 44994147 -208262436 - L1MC3 LINE L1 -18 7767 7307 2402 101 0 0 chr2 44994147 44994445 -208262138 - AluSx SINE Alu -10 302 5 482 134 71 49 chr2 44994445 44994622 -208261961 - L1MC3 LINE L1 -478 7307 5661 2015 142 0 10 chr2 44994623 44994918 -208261665 - AluJb SINE Alu 0 312 21 323 301 71 19 chr2 44995004 44995158 -208261425 + MIR SINE MIR 22 146 -62 1966 102 25 74 chr2 44995945 44996269 -208260314 + AluSg SINE Alu 1 308 -2 1815 145 6 81 chr2 44996482 44996814 -208259769 - AluSx SINE Alu -5 307 1 1938 143 0 17 chr2 44996949 44997273 -208259310 - AluJb SINE Alu 0 319 1 185 211 58 0 chr2 44997407 44997459 -208259124 - MIR SINE MIR -126 136 82 2278 116 0 19 chr2 44998353 44998671 -208257912 + AluSx SINE Alu 1 312 0 244 265 165 35 chr2 44999318 44999488 -208257095 - L2 LINE L2 -91 3222 3031 2367 101 0 0 chr2 44999589 44999887 -208256696 + AluSx SINE Alu 1 298 -14 926 121 0 0 chr2 44999890 45000014 -208256569 - AluJo/FLAM SINE Alu -188 124 1 2388 96 0 3 chr2 45001227 45001529 -208255054 - AluSq SINE Alu -12 301 1 339 239 94 14 chr2 45001897 45002035 -208254548 + MIR3 SINE MIR 42 190 -18 319 175 181 175 chr2 45002277 45002400 -208254183 + MER45A DNA AcHobo 1 127 -1454 2305 118 0 0 chr2 45002400 45002705 -208253878 - AluSx SINE Alu 0 312 8 319 175 181 175 chr2 45002705 45002758 -208253825 + MER45A DNA AcHobo 127 178 0 1849 204 0 0 chr2 45003892 45004201 -208252382 - AluJo SINE Alu -2 310 2 2016 108 51 0 chr2 45004209 45004504 -208252079 - AluSx SINE Alu -2 310 1 2292 88 3 0 chr2 45005437 45005751 -208250832 - AluSx SINE Alu 0 315 1 2453 100 0 0 chr2 45006492 45006801 -208249782 + AluSx SINE Alu 2 310 -2 736 220 95 15 chr2 45008517 45008717 -208247866 - MER20 DNA MER1_type 0 219 4 725 281 113 30 chr2 45008718 45009081 -208247502 - LTR33 LTR ERVL -96 425 33 1944 168 10 3 chr2 45009175 45009479 -208247104 + AluJb SINE Alu 1 306 -6 366 269 45 60 chr2 45009495 45009629 -208246954 + MIR SINE MIR 33 164 -98 492 282 29 65 chr2 45010123 45010368 -208246215 - MER102b DNA MER1_type 0 341 106 1797 167 13 3 chr2 45010576 45010882 -208245701 + AluJb SINE Alu 2 310 -2 195 129 0 0 chr2 45012085 45012116 -208244467 + (TGGG)n Simple_repeat Simple_repeat 2 32 0 2178 180 35 11 chr2 45013167 45013785 -208242798 - L1MB7 LINE L1 -357 5827 5114 189 107 0 0 chr2 45013785 45013813 -208242770 + (TTCC)n Simple_repeat Simple_repeat 3 30 0 2387 96 0 3 chr2 45013815 45014128 -208242455 - AluSx SINE Alu 0 312 1 461 194 0 0 chr2 45014141 45014244 -208242339 - L1MB7 LINE L1 -1016 5130 5028 2229 80 7 10 chr2 45014265 45014564 -208242019 + AluSg SINE Alu 1 298 -12 1996 129 26 0 chr2 45014682 45014984 -208241599 + AluSx SINE Alu 1 310 -2 2106 101 3 35 chr2 45014989 45015305 -208241278 + AluSq SINE Alu 7 312 -1 1731 164 0 32 chr2 45015309 45015621 -208240962 + AluJb SINE Alu 1 302 -10 371 302 43 14 chr2 45015775 45015914 -208240669 + MIR SINE MIR 112 254 -8 1820 97 4 0 chr2 45016004 45016241 -208240342 + AluSx SINE Alu 2 239 -73 319 311 33 3 chr2 45017223 45017349 -208239234 - MIR SINE MIR -55 153 29 793 244 152 11 chr2 45017418 45017701 -208238882 + MER58B DNA MER1_type 19 341 0 444 276 86 52 chr2 45018181 45018218 -208238365 - MER91A DNA MER1_type -13 183 149 2299 103 0 3 chr2 45018218 45018528 -208238055 + AluSx SINE Alu 1 309 -3 444 276 86 52 chr2 45018528 45018664 -208237919 - MER91A DNA MER1_type -47 149 4 371 233 0 0 chr2 45019126 45019199 -208237384 - MER5A DNA MER1_type -80 109 37 1709 134 57 11 chr2 45020561 45020844 -208235739 - AluJb SINE Alu -16 296 1 2103 101 0 20 chr2 45021131 45021429 -208235154 - AluSg SINE Alu -13 297 6 195 309 57 70 chr2 45021816 45022046 -208234537 + L2 LINE L2 2827 3053 -219 2213 103 0 0 chr2 45022075 45022367 -208234216 + AluSx SINE Alu 7 298 -14 1208 117 0 11 chr2 45022368 45022548 -208234035 + AluSg/x SINE Alu 135 312 0 307 277 84 34 chr2 45022579 45022698 -208233885 - MIR SINE MIR -21 241 117 1959 102 33 0 chr2 45022698 45023016 -208233567 + AluSx SINE Alu 1 327 0 486 220 30 0 chr2 45023038 45023138 -208233445 + MER81 DNA DNA 11 113 -1 205 215 0 172 chr2 45023648 45023689 -208232894 - MIR SINE MIR -109 153 135 2303 72 6 37 chr2 45023689 45024010 -208232573 + AluY SINE Alu 1 311 0 205 215 0 172 chr2 45024010 45024061 -208232522 - MIR SINE MIR -127 135 77 323 276 81 23 chr2 45024464 45024638 -208231945 + L2 LINE L2 2870 3053 -219 750 252 44 34 chr2 45024677 45024883 -208231700 - MIR SINE MIR -21 241 34 2142 121 0 19 chr2 45025097 45025410 -208231173 + AluSg SINE Alu 1 307 -3 588 252 29 0 chr2 45026592 45026731 -208229852 - MIR SINE MIR -70 192 50 439 243 92 26 chr2 45027970 45028122 -208228461 - MIR SINE MIR -40 222 61 720 35 0 0 chr2 45028246 45028333 -208228250 + (TTTC)n Simple_repeat Simple_repeat 2 88 0 2316 80 0 20 chr2 45028529 45028829 -208227754 - AluSg SINE Alu -15 295 2 236 30 30 0 chr2 45028861 45028894 -208227689 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 2001 132 26 0 chr2 45028896 45029199 -208227384 - AluSx SINE Alu -1 311 1 383 312 87 0 chr2 45029576 45029714 -208226869 + MIR SINE MIR 111 260 -2 475 308 23 0 chr2 45030580 45030710 -208225873 + L2 LINE L2 3181 3313 0 198 118 0 0 chr2 45030712 45030746 -208225837 + (CA)n Simple_repeat Simple_repeat 1 34 0 215 289 26 0 chr2 45031556 45031712 -208224871 + (CAGA)n Simple_repeat Simple_repeat 2 161 0 429 330 35 0 chr2 45031726 45031944 -208224639 + (CGGA)n Simple_repeat Simple_repeat 1 225 0 192 77 0 0 chr2 45032291 45032317 -208224266 + (CA)n Simple_repeat Simple_repeat 1 26 0 638 247 12 105 chr2 45033465 45033665 -208222918 - MIR SINE MIR -38 224 7 2222 110 3 0 chr2 45033665 45033966 -208222617 - AluSx SINE Alu -10 302 1 638 247 12 105 chr2 45033966 45033977 -208222606 - MIR SINE MIR -255 7 36 2079 75 57 0 chr2 45033977 45034256 -208222327 - AluSg SINE Alu -15 295 1 638 247 12 105 chr2 45034256 45034290 -208222293 - MIR SINE MIR -225 37 1 1543 133 144 4 chr2 45034334 45034597 -208221986 + AluJb SINE Alu 1 300 -12 180 97 0 0 chr2 45035785 45035816 -208220767 + (CA)n Simple_repeat Simple_repeat 1 31 0 189 107 0 0 chr2 45036063 45036091 -208220492 + (TC)n Simple_repeat Simple_repeat 1 28 0 182 235 10 128 chr2 45036553 45036604 -208219979 - MIR SINE MIR -78 184 149 2076 108 10 19 chr2 45036604 45036911 -208219672 + AluJb SINE Alu 1 304 -8 182 235 10 128 chr2 45036911 45036961 -208219622 - MIR SINE MIR -113 149 95 2137 108 0 0 chr2 45037348 45037645 -208218938 - AluY SINE Alu -14 297 1 360 0 0 0 chr2 45037887 45037927 -208218656 + (TG)n Simple_repeat Simple_repeat 1 40 0 283 284 90 37 chr2 45038306 45038410 -208218173 - MIR SINE MIR -61 147 32 2277 75 0 0 chr2 45038410 45038702 -208217881 - AluSx SINE Alu -20 292 1 283 284 90 37 chr2 45038702 45038732 -208217851 - MIR SINE MIR -176 32 5 341 257 54 54 chr2 45039763 45039911 -208216672 + MIR3 SINE MIR 39 186 -22 369 0 0 0 chr2 45040147 45040188 -208216395 + (TG)n Simple_repeat Simple_repeat 2 42 0 540 265 26 26 chr2 45040653 45040804 -208215779 - MIR SINE MIR -38 224 74 246 294 29 39 chr2 45040831 45040933 -208215650 - Charlie7 DNA MER1_type 0 2612 2512 190 323 31 39 chr2 45041064 45041191 -208215392 - L2 LINE L2 -236 3036 2911 1821 146 3 52 chr2 45041191 45041519 -208215064 + AluJb SINE Alu 1 312 0 240 195 0 0 chr2 45041586 45041627 -208214956 + L2 LINE L2 3221 3261 -11 937 235 22 86 chr2 45042063 45042128 -208214455 - MLT1I LTR MaLR 0 409 341 1291 143 128 59 chr2 45042128 45042401 -208214182 - AluJo SINE Alu -20 292 1 937 235 22 86 chr2 45042401 45042697 -208213886 - MLT1I LTR MaLR -68 341 71 2343 65 6 43 chr2 45043389 45043711 -208212872 + AluSg SINE Alu 1 310 0 2017 88 0 15 chr2 45043745 45044017 -208212566 + AluSx SINE Alu 35 302 -10 2283 67 0 3 chr2 45044020 45044391 -208212192 + AluY SINE Alu 1 370 0 689 126 68 0 chr2 45044397 45044500 -208212083 + AluJb SINE Alu 9 118 -194 2136 124 0 0 chr2 45044543 45044841 -208211742 - AluSx SINE Alu -14 298 1 32 26 0 0 chr2 45044843 45044882 -208211701 + AT_rich Low_complexity Low_complexity 1 39 0 340 266 127 0 chr2 45045144 45045297 -208211286 + MIR SINE MIR 9 184 -73 244 224 0 0 chr2 45045792 45045829 -208210754 + AluSq/x SINE Alu 85 124 -179 216 0 0 0 chr2 45045829 45045853 -208210730 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 244 224 0 0 chr2 45045853 45045873 -208210710 + AluSq/x SINE Alu 123 142 -161 442 294 130 0 chr2 45046009 45046193 -208210390 + MIR SINE MIR 53 260 -2 617 227 93 26 chr2 45046319 45046513 -208210070 - MIR SINE MIR -36 226 20 242 136 0 0 chr2 45046557 45046601 -208209982 - AluJb SINE Alu -6 294 251 961 154 0 18 chr2 45046601 45046644 -208209939 - AluJb SINE Alu -146 166 124 2277 106 0 0 chr2 45046644 45046945 -208209638 + AluSg SINE Alu 1 301 -9 961 154 0 18 chr2 45046945 45047070 -208209513 - AluJb SINE Alu -188 124 1 2330 100 7 0 chr2 45047207 45047516 -208209067 + AluSx SINE Alu 1 311 -1 570 122 244 52 chr2 45047519 45047691 -208208892 + L1MB7 LINE L1 5668 5872 -312 198 333 141 0 chr2 45047691 45047790 -208208793 + L2 LINE L2 3200 3312 -1 297 220 11 16 chr2 45049114 45049306 -208207277 + (CA)n Simple_repeat Simple_repeat 1 190 0 382 259 9 5 chr2 45049382 45049601 -208206982 + (CA)n Simple_repeat Simple_repeat 1 220 0 271 0 51 0 chr2 45049844 45049883 -208206700 + (CA)n Simple_repeat Simple_repeat 1 41 0 21 0 0 0 chr2 45054315 45054336 -208202247 + AT_rich Low_complexity Low_complexity 1 21 0 28 71 0 0 chr2 45054755 45054811 -208201772 + GC_rich Low_complexity Low_complexity 1 56 0 189 0 0 0 chr2 45054816 45054837 -208201746 + (CTG)n Simple_repeat Simple_repeat 1 21 0 195 173 0 0 chr2 45055096 45055148 -208201435 + GA-rich Low_complexity Low_complexity 2 53 0 29 28 0 0 chr2 45056748 45056784 -208199799 + GC_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr2 45056862 45056886 -208199697 + GC_rich Low_complexity Low_complexity 1 24 0 30 0 0 0 chr2 45057018 45057048 -208199535 + GC_rich Low_complexity Low_complexity 1 30 0 328 359 58 34 chr2 45058253 45058459 -208198124 + MIR SINE MIR 6 216 -46 760 155 197 0 chr2 45059369 45059511 -208197072 - FAM SINE Alu -5 170 1 192 40 0 0 chr2 45060002 45060027 -208196556 + (GA)n Simple_repeat Simple_repeat 1 25 0 186 71 0 0 chr2 45060026 45060054 -208196529 + (TG)n Simple_repeat Simple_repeat 2 29 0 * 2182 78 3 14 chr2 45060054 45060338 -208196245 - AluSg1 SINE Alu -28 281 1 2626 71 0 0 chr2 45062373 45062684 -208193899 - AluY SINE Alu 0 311 1 1373 136 199 7 chr2 45063507 45063793 -208192790 - MER58B DNA MER1_type 0 341 1 199 315 148 0 chr2 45064286 45064394 -208192189 - MIR SINE MIR -17 245 122 1944 111 21 90 chr2 45064844 45065177 -208191406 - AluSx SINE Alu 0 312 3 2186 122 0 0 chr2 45065191 45065486 -208191097 - AluSx SINE Alu -17 295 1 2302 105 7 0 chr2 45065492 45065798 -208190785 - AluSp SINE Alu -5 308 1 2540 47 0 10 chr2 45066019 45066315 -208190268 - AluY SINE Alu -18 293 1 436 176 0 0 chr2 45066782 45066850 -208189733 + AluJ/FLAM SINE Alu 2 69 -243 1240 158 30 125 chr2 45066869 45066986 -208189597 + L1M4 LINE L1 4657 4783 -1363 2514 55 0 32 chr2 45066986 45067296 -208189287 + AluY SINE Alu 1 300 -11 1240 158 30 125 chr2 45067296 45067571 -208189012 + L1M4 LINE L1 4783 5012 -1134 2248 128 0 3 chr2 45068286 45068592 -208187991 - AluSx SINE Alu -7 305 1 994 208 77 0 chr2 45069854 45070061 -208186522 + MER58A DNA MER1_type 1 223 -1 2209 116 0 35 chr2 45070692 45071010 -208185573 + AluSc SINE Alu 1 307 -2 2236 104 20 3 chr2 45071778 45072077 -208184506 - AluSp SINE Alu -9 304 1 1799 172 11 7 chr2 45072120 45072405 -208184178 - AluJb SINE Alu -21 291 6 216 246 0 35 chr2 45072825 45072882 -208183701 + L2 LINE L2 3138 3192 -80 22 0 0 0 chr2 45073072 45073094 -208183489 + AT_rich Low_complexity Low_complexity 1 22 0 1723 127 223 17 chr2 45073295 45073650 -208182933 + MSTA LTR MaLR 1 428 0 10042 132 7 35 chr2 45073652 45074237 -208182346 + MSTA-int LTR MaLR 3 603 -977 2266 128 0 0 chr2 45074237 45074535 -208182048 + AluSq SINE Alu 1 298 -15 10042 132 7 35 chr2 45074535 45075573 -208181010 + MSTA-int LTR MaLR 603 1580 0 1964 122 173 35 chr2 45075573 45075908 -208180675 + MSTA LTR MaLR 1 395 -33 2227 85 53 0 chr2 45075908 45076191 -208180392 - AluSp SINE Alu -15 298 1 1964 122 173 35 chr2 45076191 45076231 -208180352 + MSTA LTR MaLR 395 428 0 430 285 101 14 chr2 45076250 45076457 -208180126 + L2 LINE L2 2406 2630 -684 405 352 46 28 chr2 45076566 45076801 -208179782 - L2 LINE L2 -458 2856 2614 2017 117 58 0 chr2 45076801 45077075 -208179508 + AluSq SINE Alu 3 292 -21 405 352 46 28 chr2 45077075 45077123 -208179460 - L2 LINE L2 -700 2614 2568 2017 144 7 13 chr2 45077639 45077937 -208178646 - AluSx SINE Alu -16 296 1 907 276 26 16 chr2 45078067 45078378 -208178205 + MLT1J LTR MaLR 46 359 -152 2110 128 3 0 chr2 45078477 45078774 -208177809 + AluSx SINE Alu 1 298 -14 789 219 30 82 chr2 45078839 45079108 -208177475 - MER21B LTR ERV1 -379 484 230 2408 161 4 42 chr2 45079110 45079582 -208177001 - L1MB7 LINE L1 0 6184 5731 2122 119 0 7 chr2 45079976 45080294 -208176289 - AluSx SINE Alu 0 316 1 2203 123 16 3 chr2 45080304 45080612 -208175971 - AluSx SINE Alu 0 312 1 283 289 183 66 chr2 45080840 45081037 -208175546 + L2 LINE L2 3029 3248 -24 2490 73 0 13 chr2 45081508 45081823 -208174760 + AluSq SINE Alu 1 311 -2 202 295 158 0 chr2 45082710 45082805 -208173778 - MIR SINE MIR -79 129 20 940 279 251 56 chr2 45083848 45084544 -208172039 - L3 LINE CR1 -6 1571 740 182 179 0 26 chr2 45084557 45084596 -208171987 - MIR SINE MIR -3 259 222 448 314 118 35 chr2 45084745 45085083 -208171500 - L2 LINE L2 -353 2961 2596 636 162 4 2 chr2 45085317 45085557 -208171026 + AluJb SINE Alu 1 287 -25 614 317 58 44 chr2 45085583 45085927 -208170656 - L3 LINE CR1 -883 694 346 2462 74 3 0 chr2 45086259 45086557 -208170026 - AluSg SINE Alu -11 299 1 2309 112 0 0 chr2 45086612 45086916 -208169667 - AluSx SINE Alu -8 304 1 2865 83 25 92 chr2 45087243 45088059 -208168524 + SVA Other Other 393 868 -520 1178 38 5 38 chr2 45088076 45088285 -208168298 + SVA Other Other 665 866 -520 28 95 0 0 chr2 45088300 45088384 -208168199 + GC_rich Low_complexity Low_complexity 1 84 0 1147 117 48 91 chr2 45088497 45088728 -208167855 + AluJo SINE Alu 82 302 -10 293 270 68 0 chr2 45088871 45088945 -208167638 + MIR SINE MIR 28 106 -102 388 228 265 31 chr2 45090390 45090552 -208166031 + MIR SINE MIR 63 262 0 300 284 110 9 chr2 45091757 45091866 -208164717 - L1ME4a LINE L1 -40 6081 5962 1913 169 0 13 chr2 45091952 45092266 -208164317 - AluJo SINE Alu -2 310 1 308 335 39 26 chr2 45092588 45092743 -208163840 + L2 LINE L2 2934 3090 -182 2201 113 3 0 chr2 45093146 45093438 -208163145 + AluSp SINE Alu 1 293 -20 723 234 92 44 chr2 45093442 45093669 -208162914 - MIR SINE MIR 0 262 25 209 237 258 21 chr2 45093861 45093954 -208162629 - L2 LINE L2 -7 3306 3192 238 246 0 0 chr2 45094165 45094222 -208162361 + MARNA DNA Mariner 314 370 -216 1716 170 11 11 chr2 45094528 45094840 -208161743 - AluJo SINE Alu 0 312 1 1142 170 42 23 chr2 45094841 45095106 -208161477 - MER33 DNA MER1_type -54 270 1 505 204 10 0 chr2 45095739 45095837 -208160746 + MER94 DNA DNA 4 102 -32 231 309 238 8 chr2 45097765 45097891 -208158692 + MIR SINE MIR 6 160 -102 969 244 70 11 chr2 45097892 45098163 -208158420 + MSTD LTR MaLR 1 287 -109 233 88 0 0 chr2 45098188 45098222 -208158361 + MSTD LTR MaLR 424 457 0 987 119 15 0 chr2 45098544 45098678 -208157905 - AluSg/x SINE Alu -20 292 157 2229 117 0 13 chr2 45098724 45099058 -208157525 + AluSx SINE Alu 3 312 0 932 183 0 0 chr2 45099058 45099200 -208157383 + AluSg/x SINE Alu 132 273 -37 204 40 0 0 chr2 45099204 45099229 -208157354 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 2597 48 3 3 chr2 45099352 45099662 -208156921 - AluY SINE Alu -1 310 1 303 261 45 9 chr2 45099694 45099805 -208156778 - L1MC4a LINE L1 -1877 5931 5817 1436 160 4 17 chr2 45099806 45100037 -208156546 - AluJo SINE Alu 0 312 85 267 54 0 0 chr2 45100404 45100441 -208156142 + (CCAA)n Simple_repeat Simple_repeat 2 38 0 371 286 8 25 chr2 45102014 45102133 -208154450 - L2 LINE L2 -4 3268 3152 311 150 17 0 chr2 45102198 45102258 -208154325 + GA-rich Low_complexity Low_complexity 3 63 0 277 70 0 0 chr2 45103955 45103998 -208152585 + Alu SINE Alu 256 298 -4 186 133 0 0 chr2 45104388 45104418 -208152165 + (CACCC)n Simple_repeat Simple_repeat 4 33 0 183 265 41 0 chr2 45104629 45104678 -208151905 - MER5A DNA MER1_type -79 110 60 1422 240 78 21 chr2 45105766 45106199 -208150384 + Charlie4a DNA MER1_type 43 500 -8 700 103 41 20 chr2 45106661 45106807 -208149776 + MER53 DNA DNA 3 151 -38 198 281 10 62 chr2 45106994 45107090 -208149493 + MIR3 SINE MIR 97 187 -21 534 291 13 0 chr2 45107854 45108005 -208148578 - MIR SINE MIR -8 254 102 259 219 219 0 chr2 45108925 45108998 -208147585 - MIR3 SINE MIR -6 202 114 1246 155 18 18 chr2 45109269 45109488 -208147095 - MER20 DNA MER1_type 0 219 1 253 111 0 0 chr2 45110800 45110836 -208145747 - MIR SINE MIR -109 153 118 397 259 22 22 chr2 45111310 45111449 -208145134 - MIR SINE MIR -85 177 39 1977 126 0 0 chr2 45112245 45112514 -208144069 + AluSx SINE Alu 37 305 -7 285 236 14 0 chr2 45114939 45115011 -208141572 + MER91B DNA MER1_type 2 74 -116 712 259 133 24 chr2 45115148 45115441 -208141142 - L2 LINE L2 0 3313 2989 465 275 143 16 chr2 45115652 45115834 -208140749 + MIR SINE MIR 48 252 -10 495 145 0 0 chr2 45115850 45115933 -208140650 + (AGGTG)n Simple_repeat Simple_repeat 3 85 0 235 285 200 8 chr2 45116462 45116592 -208139991 - MIR SINE MIR 0 262 108 203 310 0 0 chr2 45116835 45116893 -208139690 - MER5A DNA MER1_type -108 81 24 398 272 283 11 chr2 45116976 45117156 -208139427 - MIR SINE MIR -1 261 33 633 256 38 115 chr2 45118061 45118149 -208138434 - L2 LINE L2 -12 3301 3208 2527 84 0 0 chr2 45118149 45118457 -208138126 + AluSq SINE Alu 1 308 -5 633 256 38 115 chr2 45118457 45118522 -208138061 - L2 LINE L2 -105 3208 3140 1793 124 99 11 chr2 45118522 45118805 -208137778 - AluJo SINE Alu -4 308 1 633 256 38 115 chr2 45118805 45119068 -208137515 - L2 LINE L2 -173 3140 2916 926 266 166 29 chr2 45120548 45121238 -208135345 + L2 LINE L2 2508 3311 -2 2148 111 3 33 chr2 45121297 45121604 -208134979 + AluSx SINE Alu 1 298 -14 210 217 242 8 chr2 45121612 45121732 -208134851 - MIR SINE MIR -7 255 108 580 164 15 65 chr2 45121804 45121843 -208134740 + MLT1H LTR MaLR 34 73 -476 348 24 0 0 chr2 45121843 45121884 -208134699 + (CA)n Simple_repeat Simple_repeat 1 41 0 580 164 15 65 chr2 45121884 45121997 -208134586 + MLT1H LTR MaLR 73 210 -339 2122 188 30 23 chr2 45122008 45122374 -208134209 - MER45B DNA AcHobo -551 1030 659 2144 97 23 39 chr2 45122374 45122684 -208133899 - AluSq SINE Alu -8 305 1 2122 188 30 23 chr2 45122684 45122791 -208133792 - MER45B DNA AcHobo -922 659 554 350 214 122 20 chr2 45122791 45122889 -208133694 - MER45B DNA AcHobo -806 234 127 1691 183 25 0 chr2 45122896 45123175 -208133408 + AluJo SINE Alu 1 286 -26 545 248 51 0 chr2 45123197 45123334 -208133249 + MLT1G1 LTR MaLR 447 590 -5 193 347 14 14 chr2 45123346 45123418 -208133165 - MIR SINE MIR -171 91 20 266 247 34 11 chr2 45123992 45124081 -208132502 - MLT1L LTR MaLR -4 611 521 2189 101 0 0 chr2 45124085 45124372 -208132211 - AluSx SINE Alu -25 287 1 928 119 41 128 chr2 45124374 45124542 -208132041 + MER2 DNA MER2_type 123 304 -41 1671 136 12 16 chr2 45124542 45124792 -208131791 - AluJb SINE Alu -22 290 42 2274 119 13 10 chr2 45124797 45125108 -208131475 - AluSx SINE Alu 0 312 1 928 119 41 128 chr2 45125108 45125176 -208131407 + MER2 DNA MER2_type 308 344 -1 407 360 0 7 chr2 45125235 45125374 -208131209 + MIR SINE MIR 14 151 -111 2347 106 3 10 chr2 45125435 45125746 -208130837 + AluSx SINE Alu 1 309 -3 489 238 236 40 chr2 45126117 45126537 -208130046 - LTR67 LTR ERVL -7 550 49 2163 123 0 0 chr2 45126564 45126873 -208129710 + AluSx SINE Alu 1 309 0 1679 156 59 4 chr2 45127147 45127417 -208129166 - AluJb SINE Alu -14 298 14 954 198 23 103 chr2 45127638 45128017 -208128566 + L1MC4 LINE L1 7616 7995 0 2037 103 81 0 chr2 45128194 45128467 -208128116 - AluSx SINE Alu -17 295 1 285 229 48 36 chr2 45128491 45128574 -208128009 - MIR3 SINE MIR -48 160 77 297 275 1 0 chr2 45128815 45128897 -208127686 - MIR SINE MIR -63 145 63 473 198 58 41 chr2 45129109 45129230 -208127353 + MER91C DNA MER1_type 18 140 0 192 328 16 0 chr2 45129329 45129390 -208127193 - L2 LINE L2 -5 3308 3247 1744 124 109 0 chr2 45129660 45129969 -208126614 - AluSx SINE Alu 0 312 1 1859 167 10 13 chr2 45129969 45130274 -208126309 - AluJo SINE Alu -8 304 1 219 114 0 0 chr2 45130309 45130344 -208126239 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 22 0 0 0 chr2 45130425 45130447 -208126136 + AT_rich Low_complexity Low_complexity 1 22 0 2218 134 0 0 chr2 45130447 45130752 -208125831 + AluSx SINE Alu 1 305 -7 525 295 151 21 chr2 45130858 45131383 -208125200 - L1ME4a LINE L1 -188 5933 5355 2290 99 3 7 chr2 45131544 45131847 -208124736 - AluSx SINE Alu -10 302 1 2498 70 3 0 chr2 45132055 45132354 -208124229 - AluSp SINE Alu -13 300 1 878 148 0 3 chr2 45132954 45133314 -208123269 + (TG)n Simple_repeat Simple_repeat 1 358 0 248 292 15 0 chr2 45133361 45133426 -208123157 + L2 LINE L2 3241 3306 -7 456 317 5 55 chr2 45133436 45133635 -208122948 + MIR SINE MIR 24 212 -50 2079 138 14 0 chr2 45134060 45134349 -208122234 + AluSx SINE Alu 1 293 -19 210 37 0 0 chr2 45134611 45134638 -208121945 + (GA)n Simple_repeat Simple_repeat 2 28 0 2161 105 0 7 chr2 45134638 45134915 -208121668 - AluSx SINE Alu -34 278 4 273 339 33 70 chr2 45135379 45135478 -208121105 + L2 LINE L2 2525 2626 -688 1877 159 7 17 chr2 45135478 45135773 -208120810 - AluJb SINE Alu -20 292 1 273 339 33 70 chr2 45135773 45135915 -208120668 + L2 LINE L2 2626 2757 -557 2780 154 55 14 chr2 45136383 45136943 -208119640 + L1MB5 LINE L1 5584 6166 -8 710 171 8 0 chr2 45136969 45137137 -208119446 + FLAM_C SINE Alu 1 169 0 196 349 41 35 chr2 45138543 45138712 -208117871 + L2 LINE L2 684 853 -2461 304 269 142 15 chr2 45138746 45138880 -208117703 - MIR SINE MIR -1 261 111 282 314 137 32 chr2 45139748 45140149 -208116434 + L2 LINE L2 1785 2227 -1087 1097 257 71 83 chr2 45140291 45140882 -208115701 + MLT1K LTR MaLR 5 588 0 777 121 0 9 chr2 45142615 45142731 -208113852 + FLAM_C SINE Alu 3 117 -16 1339 181 43 63 chr2 45142806 45142977 -208113606 - AluJb SINE Alu -15 297 133 198 0 0 0 chr2 45142977 45142999 -208113584 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1339 181 43 63 chr2 45142999 45143126 -208113457 - AluJb SINE Alu -179 133 5 879 190 0 0 chr2 45143128 45143265 -208113318 - AluJo SINE Alu -175 137 1 741 132 34 117 chr2 45144498 45144627 -208111956 - MER53 DNA DNA 0 189 82 2409 106 3 0 chr2 45144627 45144939 -208111644 + AluSp SINE Alu 1 313 0 741 132 34 117 chr2 45144939 45145014 -208111569 - MER53 DNA DNA -107 82 2 230 152 43 0 chr2 45145826 45145872 -208110711 + Charlie8 DNA MER1_type 1362 1409 -1008 959 271 92 5 chr2 45145990 45146359 -208110224 - L1MC4a LINE L1 -1910 5898 5498 1227 119 0 0 chr2 45146375 45146535 -208110048 - AluSg/x SINE Alu -17 293 134 542 131 12 0 chr2 45146535 45146619 -208109964 - AluJ/FLAM SINE Alu -226 86 2 279 275 71 33 chr2 45146625 45146836 -208109747 - L1MC4a LINE L1 -2326 5482 5264 413 86 0 0 chr2 45146864 45146922 -208109661 + FLAM_A SINE Alu 19 76 -56 475 360 113 28 chr2 45146964 45147458 -208109125 - L1MC4a LINE L1 -3177 2969 2434 262 258 17 17 chr2 45147469 45147589 -208108994 - L1MC4a LINE L1 -3733 2413 2294 1611 124 0 0 chr2 45147599 45147816 -208108767 - AluSg/x SINE Alu -1 309 93 1802 95 0 99 chr2 45147828 45148014 -208108569 - AluSx SINE Alu -18 294 146 2329 107 3 3 chr2 45148014 45148322 -208108261 - AluSq SINE Alu -4 309 2 1802 95 0 99 chr2 45148322 45148429 -208108154 - AluSx SINE Alu -166 146 30 888 284 60 56 chr2 45148507 45148954 -208107629 + MLT1J LTR MaLR 39 487 -24 473 250 173 13 chr2 45149144 45149300 -208107283 + MER5A DNA MER1_type 9 189 0 311 283 78 74 chr2 45149720 45149964 -208106619 + MLT1L LTR MaLR 197 441 -174 1223 65 12 6 chr2 45150125 45150294 -208106289 - L1PA10 LINE L1 -12 6156 5987 2457 93 3 0 chr2 45150659 45150971 -208105612 - AluSp SINE Alu 0 313 1 549 0 0 0 chr2 45152317 45152378 -208104205 + (CA)n Simple_repeat Simple_repeat 2 62 0 2339 82 0 38 chr2 45152696 45153011 -208103572 + AluY SINE Alu 1 303 -8 511 332 79 3 chr2 45153839 45154226 -208102357 + MLT1J LTR MaLR 20 463 -48 352 210 76 34 chr2 45156528 45156647 -208099936 + MIR SINE MIR 16 139 -69 321 329 7 7 chr2 45156966 45157103 -208099480 + MIR SINE MIR 21 157 -105 847 203 6 6 chr2 45157107 45157270 -208099313 + FAM SINE Alu 1 47 -2 881 248 160 50 chr2 45157885 45157999 -208098584 - L2 LINE L2 0 3313 3213 2539 73 7 0 chr2 45157999 45158301 -208098282 - AluSx SINE Alu -8 304 1 881 248 160 50 chr2 45158301 45158821 -208097762 - L2 LINE L2 -100 3213 2580 230 250 67 0 chr2 45158817 45158877 -208097706 + L2 LINE L2 3249 3312 -1 * 1286 141 9 5 chr2 45208962 45209175 -208047408 + AluSg/x SINE Alu 99 312 0 189 0 0 0 chr2 45209217 45209238 -208047345 + (A)n Simple_repeat Simple_repeat 1 21 0 2009 159 62 19 chr2 45209238 45209608 -208046975 - MSTB LTR MaLR -40 386 1 2315 108 0 13 chr2 45209888 45210204 -208046379 + AluSx SINE Alu 1 312 0 1185 120 0 0 chr2 45210633 45210791 -208045792 - AluSx SINE Alu -154 158 1 270 146 0 0 chr2 45210791 45210832 -208045751 + MSTA LTR MaLR 388 428 0 2132 232 48 2 chr2 45210833 45211307 -208045276 + MLT1F LTR MaLR 1 496 -46 2244 64 3 7 chr2 45211447 45211754 -208044829 + AluSp SINE Alu 1 306 0 22 0 0 0 chr2 45212100 45212122 -208044461 + AT_rich Low_complexity Low_complexity 1 22 0 309 293 73 20 chr2 45212609 45212625 -208043958 + L1ME3A LINE L1 6010 6024 -146 1801 159 3 46 chr2 45212625 45212951 -208043632 - AluSx SINE Alu 0 312 1 309 293 73 20 chr2 45212951 45213084 -208043499 + L1ME3A LINE L1 6024 6167 -3 649 186 0 0 chr2 45213426 45213523 -208043060 - FLAM_A SINE Alu -44 98 2 22 0 0 0 chr2 45213791 45213813 -208042770 + AT_rich Low_complexity Low_complexity 1 22 0 23 68 0 0 chr2 45215161 45215205 -208041378 + AT_rich Low_complexity Low_complexity 1 44 0 22 0 0 0 chr2 45215493 45215515 -208041068 + AT_rich Low_complexity Low_complexity 1 22 0 324 278 33 40 chr2 45216244 45216412 -208040171 + MIR SINE MIR 31 198 -64 238 313 16 0 chr2 45216560 45216624 -208039959 + L2 LINE L2 3208 3272 0 346 344 51 32 chr2 45216641 45216798 -208039785 + MIR3 SINE MIR 35 194 -14 253 217 0 17 chr2 45216827 45216887 -208039696 + L2 LINE L2 3222 3280 -33 181 265 0 0 chr2 45217571 45217605 -208038978 - L2 LINE L2 -102 3170 3137 330 365 39 19 chr2 45218070 45218226 -208038357 - L3b LINE CR1 -24 1559 1401 1898 125 3 52 chr2 45218411 45218716 -208037867 - AluSg SINE Alu -6 304 15 348 333 49 0 chr2 45218759 45218882 -208037701 - L2 LINE L2 -1 3271 3143 490 311 101 0 chr2 45218955 45219174 -208037409 - MIR SINE MIR -10 252 12 2065 122 3 7 chr2 45219411 45219705 -208036878 - AluSx SINE Alu -19 293 1 304 306 92 0 chr2 45219805 45219903 -208036680 + L1MEd LINE L1 499 605 -5514 237 33 0 0 chr2 45220031 45220061 -208036522 + (TTG)n Simple_repeat Simple_repeat 1 30 0 6027 150 10 7 chr2 45220095 45220884 -208035699 - L1PB1 LINE L1 -1 6150 5365 231 36 0 0 chr2 45220884 45220912 -208035671 + (TTC)n Simple_repeat Simple_repeat 2 29 0 2259 85 3 3 chr2 45220914 45221196 -208035387 - AluSp SINE Alu -31 282 1 6027 150 10 7 chr2 45221196 45221990 -208034593 - L1PB1 LINE L1 -786 5365 4558 257 313 10 30 chr2 45221991 45222090 -208034493 + L2 LINE L2 1729 1825 -1489 1612 263 129 12 chr2 45222091 45222371 -208034212 + L2 LINE L2 2368 2614 -699 1943 140 3 16 chr2 45222371 45222678 -208033905 - AluSx SINE Alu -9 303 1 1612 263 129 12 chr2 45222678 45223072 -208033511 + L2 LINE L2 2614 3130 -183 2584 155 9 12 chr2 45223074 45223499 -208033084 + MER57B LTR ERV1 1 424 -10 301 105 70 0 chr2 45223667 45223724 -208032859 + L1MB3 LINE L1 6123 6183 0 255 351 21 0 chr2 45224061 45224155 -208032428 + MIR SINE MIR 44 139 -69 510 326 71 5 chr2 45224282 45224466 -208032117 - MER91A DNA MER1_type 0 196 1 2245 96 3 0 chr2 45224628 45224920 -208031663 + AluSc SINE Alu 1 293 -16 343 287 211 29 chr2 45225202 45225411 -208031172 + L2 LINE L2 2532 2778 -536 485 253 103 23 chr2 45225938 45226112 -208030471 + MIR SINE MIR 75 262 0 25 83 0 0 chr2 45226768 45226828 -208029755 + AT_rich Low_complexity Low_complexity 1 60 0 261 262 99 14 chr2 45226886 45227027 -208029556 + L1ME4a LINE L1 5967 6119 -2 1768 327 61 57 chr2 45227991 45228652 -208027931 + L1PA10 LINE L1 5392 6058 -110 2149 130 0 7 chr2 45228652 45228960 -208027623 + AluSg SINE Alu 1 306 -4 1768 327 61 57 chr2 45228960 45229071 -208027512 + L1PA10 LINE L1 6058 6167 -1 1393 170 50 23 chr2 45229131 45229431 -208027152 + L1MB4 LINE L1 5841 6148 -32 1191 224 7 7 chr2 45229437 45229723 -208026860 + L1MEc LINE L1 1851 2136 -4260 475 284 134 24 chr2 45230048 45230420 -208026163 + L1MEc LINE L1 2507 2837 -3378 1987 135 0 0 chr2 45230420 45230724 -208025859 - AluSq SINE Alu 0 304 1 475 284 134 24 chr2 45230724 45231060 -208025523 + L1MEc LINE L1 2837 3294 -2921 464 216 0 0 chr2 45231122 45231210 -208025373 + FRAM SINE Alu 72 159 -17 935 228 56 16 chr2 45231215 45231465 -208025118 + L1ME3A LINE L1 5904 6163 -7 316 256 152 0 chr2 45231537 45231662 -208024921 + L1MEc LINE L1 3867 4010 -2205 764 283 71 52 chr2 45231701 45232071 -208024512 + L1MEc LINE L1 4139 4529 -1686 2312 111 0 6 chr2 45232071 45232386 -208024197 + AluSq SINE Alu 1 313 0 764 283 71 52 chr2 45232386 45232703 -208023880 + L1MEc LINE L1 4529 4839 -1376 2250 105 0 13 chr2 45232709 45233015 -208023568 + AluSx SINE Alu 1 302 -10 2109 217 141 13 chr2 45233156 45233779 -208022804 + L2 LINE L2 2013 2715 -599 2039 161 62 5 chr2 45233779 45234061 -208022522 + L1MB4 LINE L1 5570 5883 -297 1468 198 31 7 chr2 45234061 45234349 -208022234 + AluJb SINE Alu 18 312 0 2039 161 62 5 chr2 45234349 45234470 -208022113 + L1MB4 LINE L1 5883 5996 -184 21 0 0 0 chr2 45234472 45234493 -208022090 + AT_rich Low_complexity Low_complexity 1 21 0 407 333 104 42 chr2 45234499 45234787 -208021796 - L2 LINE L2 -962 2352 2047 1799 242 153 63 chr2 45234810 45235512 -208021071 + HAL1 LINE L1 30 667 -1840 1727 159 7 30 chr2 45235512 45235814 -208020769 + AluJb SINE Alu 1 295 -17 435 19 0 0 chr2 45235816 45235868 -208020715 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 1799 242 153 63 chr2 45235868 45236113 -208020470 + HAL1 LINE L1 667 1066 -1441 49 80 0 0 chr2 45236130 45236242 -208020341 + AT_rich Low_complexity Low_complexity 1 112 0 1657 193 3 3 chr2 45236266 45236556 -208020027 + AluJo SINE Alu 1 290 -22 22 0 0 0 chr2 45236787 45236809 -208019774 + AT_rich Low_complexity Low_complexity 1 22 0 887 263 87 82 chr2 45237456 45238159 -208018424 + L2 LINE L2 2632 3313 0 308 256 74 45 chr2 45238386 45238562 -208018021 + L1MEc LINE L1 4888 5068 -1147 483 279 159 24 chr2 45238868 45239158 -208017425 + L1MC/D LINE L1 5376 5704 -2104 552 174 69 56 chr2 45239346 45239490 -208017093 + LTR40a LTR ERVL 1 146 -373 422 277 102 31 chr2 45239509 45239724 -208016859 + L1MEc LINE L1 5260 5458 -773 2449 50 7 3 chr2 45239724 45240023 -208016560 + AluY SINE Alu 1 300 -11 422 277 102 31 chr2 45240023 45240293 -208016290 + L1MEc LINE L1 5458 5786 -445 1963 100 32 44 chr2 45240401 45240742 -208015841 - Tigger7 DNA MER2_type 0 2487 2151 528 207 45 0 chr2 45240727 45240838 -208015745 - Tigger7 DNA MER2_type -575 130 15 * 621 153 0 0 chr2 45240844 45240942 -208015641 + Tigger7 DNA MER2_type 32 129 -604 775 89 0 0 chr2 45240985 45241097 -208015486 + Tigger7 DNA MER2_type 2254 2365 -126 * 2524 155 27 0 chr2 45241094 45241507 -208015076 + MER44D DNA MER2_type 127 605 0 513 282 75 25 chr2 45241851 45242092 -208014491 - L1MC4a LINE L1 -1849 5959 5707 210 252 122 61 chr2 45243592 45243707 -208012876 - L2 LINE L2 -12 3301 3180 2087 115 0 20 chr2 45243860 45244165 -208012418 + AluSx SINE Alu 3 301 -11 505 342 12 112 chr2 45244519 45244937 -208011646 + L2 LINE L2 2896 3271 -1 401 229 99 72 chr2 45245050 45245324 -208011259 + L2 LINE L2 2948 3313 0 192 343 39 0 chr2 45245806 45245908 -208010675 + L2 LINE L2 2147 2252 -1062 429 239 0 23 chr2 45245910 45245998 -208010585 + MER81 DNA DNA 3 88 -26 227 283 109 22 chr2 45246004 45246142 -208010441 + L2 LINE L2 2243 2392 -922 250 364 13 0 chr2 45246434 45246511 -208010072 + MIR SINE MIR 47 124 -84 238 273 0 18 chr2 45246789 45246844 -208009739 + L2 LINE L2 3254 3307 -6 1870 157 0 7 chr2 45247516 45247803 -208008780 + AluJb SINE Alu 1 285 -27 279 0 0 0 chr2 45247824 45247855 -208008728 + (CA)n Simple_repeat Simple_repeat 2 32 0 655 150 0 53 chr2 45248011 45248198 -208008385 + (GGGA)n Simple_repeat Simple_repeat 3 179 0 428 174 12 37 chr2 45248198 45248359 -208008224 + GA-rich Low_complexity Low_complexity 2 158 0 2112 100 7 7 chr2 45248384 45248674 -208007909 + AluSx SINE Alu 1 290 -22 22 0 0 0 chr2 45249647 45249669 -208006914 + AT_rich Low_complexity Low_complexity 1 22 0 435 127 0 0 chr2 45249976 45250055 -208006528 + AluS SINE Alu 226 304 -6 22 56 0 0 chr2 45250091 45250127 -208006456 + AT_rich Low_complexity Low_complexity 1 36 0 1749 158 14 10 chr2 45250194 45250486 -208006097 + AluJb SINE Alu 1 293 -19 253 418 49 9 chr2 45252014 45252342 -208004241 + L2 LINE L2 2131 2471 -843 1574 251 81 26 chr2 45252377 45252875 -208003708 + MLT1H1 LTR MaLR 1 492 -63 435 296 17 17 chr2 45253505 45253620 -208002963 - MIR3 SINE MIR -30 178 64 219 258 21 65 chr2 45255131 45255224 -208001359 - L2 LINE L2 -2 3311 3223 369 142 208 50 chr2 45255524 45255644 -208000939 + MER103 DNA DNA 25 163 -3 240 111 0 0 chr2 45255647 45255683 -208000900 + (TC)n Simple_repeat Simple_repeat 1 36 0 919 274 77 77 chr2 45256371 45256980 -207999603 - MLT1L LTR MaLR -5 610 2 2025 125 3 22 chr2 45257480 45257792 -207998791 - AluJb SINE Alu -6 306 1 22 0 0 0 chr2 45257812 45257834 -207998749 + AT_rich Low_complexity Low_complexity 1 22 0 6306 126 71 19 chr2 45258825 45259018 -207997565 + Tigger3b DNA MER2_type 1 182 -2846 2279 86 7 0 chr2 45259018 45259308 -207997275 + AluSx SINE Alu 1 292 -20 6306 126 71 19 chr2 45259308 45260284 -207996299 + Tigger3b DNA MER2_type 182 1231 0 1855 172 0 17 chr2 45261381 45261683 -207994900 - AluJb SINE Alu -15 297 1 496 273 103 38 chr2 45262262 45262687 -207993896 - L1ME4a LINE L1 -102 6019 5567 1798 166 20 0 chr2 45262693 45262995 -207993588 - AluJb SINE Alu -4 308 1 227 360 64 25 chr2 45263143 45263379 -207993204 - L1ME LINE L1 -350 5771 5527 283 330 64 37 chr2 45263658 45263846 -207992737 + L2 LINE L2 2864 3056 -216 437 185 34 92 chr2 45263995 45264114 -207992469 + MIR SINE MIR 86 197 -65 751 261 33 23 chr2 45265263 45265478 -207991105 - Charlie8 DNA MER1_type -2199 218 2 1856 148 105 6 chr2 45266117 45266449 -207990134 + MLT1A1 LTR MaLR 1 365 0 319 215 171 57 chr2 45266469 45266697 -207989886 - L1MC5 LINE L1 -733 7228 6975 3860 178 76 22 chr2 45266738 45267710 -207988873 - L1MB7 LINE L1 -19 6165 5148 1067 147 0 18 chr2 45267735 45267898 -207988685 - FRAM SINE Alu -16 160 1 229 143 0 0 chr2 45267898 45267940 -207988643 - L1MB7 LINE L1 -978 5168 5127 4389 224 77 14 chr2 45267949 45269167 -207987416 - L1MB7 LINE L1 -1000 5146 3848 1276 166 209 11 chr2 45269167 45269450 -207987133 + MER44D DNA MER2_type 1 609 0 4389 224 77 14 chr2 45269450 45269472 -207987111 - L1MB7 LINE L1 -2298 3848 3829 292 87 0 22 chr2 45269900 45269946 -207986637 - MADE1 DNA Mariner 0 80 36 1652 181 34 46 chr2 45270012 45270361 -207986222 + MER7A DNA MER2_type 3 345 -1 2152 141 0 3 chr2 45270584 45270897 -207985686 + AluSx SINE Alu 1 312 0 336 318 65 7 chr2 45270908 45271062 -207985521 + L1ME3A LINE L1 5042 5204 -942 1249 273 103 16 chr2 45271147 45271719 -207984864 + L1ME3A LINE L1 5276 5897 -273 1191 158 30 21 chr2 45272187 45272421 -207984162 + MER46A DNA MER2_type 1 236 0 1684 143 23 36 chr2 45272880 45273187 -207983396 + AluSx SINE Alu 1 303 -9 809 127 0 28 chr2 45273728 45273870 -207982713 + AluSp/q SINE Alu 175 312 -1 381 234 0 92 chr2 45274142 45274283 -207982300 + MIR3 SINE MIR 75 202 -6 1976 137 38 25 chr2 45274671 45275036 -207981547 + L1MB8 LINE L1 5809 6178 0 230 274 55 0 chr2 45276158 45276231 -207980352 + L1MC/D LINE L1 5829 5905 -1903 508 294 8 0 chr2 45276291 45276417 -207980166 + MIR SINE MIR 29 155 -107 26 0 0 0 chr2 45277669 45277695 -207978888 + AT_rich Low_complexity Low_complexity 1 26 0 355 283 72 19 chr2 45278251 45278558 -207978025 + L1MC5 LINE L1 7495 7817 -144 189 0 0 0 chr2 45278944 45278965 -207977618 + (A)n Simple_repeat Simple_repeat 1 21 0 2249 104 0 22 chr2 45278968 45279286 -207977297 + AluSx SINE Alu 1 311 -1 2248 85 3 0 chr2 45280769 45281085 -207975498 - AluSp SINE Alu 0 317 1 242 365 71 0 chr2 45281138 45281264 -207975319 - MIR SINE MIR 0 262 128 538 298 0 7 chr2 45281268 45281409 -207975174 + MIR SINE MIR 3 142 -120 940 206 0 11 chr2 45282189 45282373 -207974210 + FRAM SINE Alu 1 174 -2 2023 132 0 3 chr2 45282451 45282740 -207973843 + AluJb SINE Alu 1 288 -24 551 79 106 1 chr2 45282740 45283415 -207973168 + (TA)n Simple_repeat Simple_repeat 1 745 0 353 282 39 0 chr2 45283678 45283834 -207972749 + L1MEc LINE L1 1567 1728 -4668 2295 251 71 17 chr2 45283854 45284491 -207972092 + L2 LINE L2 2307 2977 -337 315 298 48 0 chr2 45284610 45284694 -207971889 - MIR SINE MIR -151 111 24 181 354 47 39 chr2 45286265 45286392 -207970191 + L2 LINE L2 3139 3266 -6 924 234 16 62 chr2 45287593 45287635 -207968948 - MIR SINE MIR -12 250 208 2390 82 7 0 chr2 45287635 45287938 -207968645 - AluSq SINE Alu -8 305 1 924 234 16 62 chr2 45287938 45288151 -207968432 - MIR SINE MIR -54 208 7 894 137 42 0 chr2 45288309 45288477 -207968106 - L1MB4 LINE L1 0 6180 6006 1068 176 0 78 chr2 45288686 45288891 -207967692 - AluJo SINE Alu -37 275 87 660 197 0 16 chr2 45288893 45289020 -207967563 - FAM SINE Alu -60 125 1 362 234 72 9 chr2 45289371 45289482 -207967101 + MIR SINE MIR 115 232 -30 27 0 0 0 chr2 45289645 45289672 -207966911 + AT_rich Low_complexity Low_complexity 1 27 0 329 302 0 10 chr2 45291381 45291477 -207965106 + L1 LINE L1 3951 4045 -2101 313 301 29 0 chr2 45291515 45291618 -207964965 + L1 LINE L1 4064 4169 -1977 2090 118 3 7 chr2 45291638 45291943 -207964640 + AluSx SINE Alu 1 304 -8 2514 196 56 2 chr2 45291943 45292284 -207964299 + L1P LINE L1 3823 4213 -1933 7232 52 2 1 chr2 45292284 45293420 -207963163 + L1PA8 LINE L1 5023 6164 -8 2514 196 56 2 chr2 45293420 45293644 -207962939 + L1P LINE L1 4213 4423 -1723 6024 127 41 46 chr2 45293698 45294905 -207961678 - L1MA5A LINE L1 -2 6295 5084 1966 113 23 23 chr2 45294905 45295215 -207961368 + AluSx SINE Alu 3 312 0 6024 127 41 46 chr2 45295215 45295321 -207961262 - L1MA5A LINE L1 -1213 5084 4979 2015 103 59 0 chr2 45295321 45295611 -207960972 - AluSc SINE Alu -2 307 1 6024 127 41 46 chr2 45295611 45295901 -207960682 - L1MA5A LINE L1 -1318 4979 4708 29 0 0 0 chr2 45296220 45296249 -207960334 + AT_rich Low_complexity Low_complexity 1 29 0 465 268 21 21 chr2 45296310 45296452 -207960131 + MIR SINE MIR 121 262 0 1462 181 100 0 chr2 45297196 45297466 -207959117 + AluJb SINE Alu 3 299 -13 558 283 46 0 chr2 45298155 45298328 -207958255 + MIR3 SINE MIR 23 203 -5 25 0 0 0 chr2 45298885 45298910 -207957673 + AT_rich Low_complexity Low_complexity 1 25 0 1838 149 56 3 chr2 45300546 45300834 -207955749 - AluJb SINE Alu -9 303 1 34 24 0 0 chr2 45300837 45300878 -207955705 + AT_rich Low_complexity Low_complexity 1 41 0 5381 28 0 11 chr2 45301910 45302553 -207954030 - L1PA3 LINE L1 -3 6152 5517 1731 171 80 16 chr2 45302841 45303216 -207953367 + MER57A LTR ERV1 3 401 -2 1773 140 14 21 chr2 45303592 45303877 -207952706 - AluJb SINE Alu -28 284 2 668 290 65 58 chr2 45303882 45304296 -207952287 + LTR68 LTR ERV1 2 418 -322 2167 160 70 10 chr2 45304301 45304702 -207951881 - MSTB LTR MaLR -1 425 1 2236 107 0 10 chr2 45305043 45305353 -207951230 + AluSg SINE Alu 1 307 -3 663 266 74 46 chr2 45305396 45305719 -207950864 + MARNA DNA Mariner 203 534 -52 265 257 34 81 chr2 45305587 45305735 -207950848 - MARNA DNA Mariner -403 183 43 * 189 234 0 104 chr2 45306095 45306172 -207950411 - MIR SINE MIR -71 191 123 194 125 0 0 chr2 45306663 45306695 -207949888 - L2 LINE L2 0 3313 3282 584 249 62 16 chr2 45306695 45306888 -207949695 - LTR16A LTR ERVL 0 450 249 231 214 14 29 chr2 45306956 45307026 -207949557 - LTR16A1 LTR ERVL -388 69 1 314 250 56 0 chr2 45307028 45307100 -207949483 - L2 LINE L2 -29 3243 3168 1562 205 18 0 chr2 45307272 45307555 -207949028 + AluJo SINE Alu 13 300 -12 619 165 0 0 chr2 45307562 45307671 -207948912 - FLAM_C SINE Alu -11 132 24 1938 167 3 3 chr2 45307685 45307997 -207948586 - AluJb SINE Alu 0 312 1 197 105 0 26 chr2 45308919 45308957 -207947626 + (TTTTC)n Simple_repeat Simple_repeat 2 38 0 2397 84 0 3 chr2 45308959 45309267 -207947316 - AluSc SINE Alu -2 307 1 859 171 44 6 chr2 45309471 45309629 -207946954 - MER20 DNA MER1_type -2 217 54 289 163 0 0 chr2 45309633 45309676 -207946907 - MER96B DNA MER1_type? -184 233 191 784 171 72 13 chr2 45309820 45309972 -207946611 - MER45A DNA AcHobo -17 161 1 448 191 45 0 chr2 45310146 45310235 -207946348 + AluJ/FLAM SINE Alu 1 93 -219 332 226 151 0 chr2 45310235 45310328 -207946255 + MER96B DNA MER1_type? 311 417 0 1049 171 33 0 chr2 45310366 45310547 -207946036 - MER5A DNA MER1_type -1 188 2 432 311 86 90 chr2 45310745 45311012 -207945571 + L2 LINE L2 2985 3250 -22 891 126 0 0 chr2 45311213 45311340 -207945243 + FLAM_C SINE Alu 1 127 -16 874 127 127 19 chr2 45311394 45311552 -207945031 + AluSc SINE Alu 118 292 -17 2377 84 0 0 chr2 45311654 45311953 -207944630 + AluY SINE Alu 1 299 -12 302 118 20 0 chr2 45312052 45312103 -207944480 + MADE1 DNA Mariner 1 52 -28 2023 140 20 0 chr2 45312330 45312623 -207943960 + AluSg SINE Alu 1 299 -11 1755 177 14 0 chr2 45312636 45312930 -207943653 - AluJb SINE Alu -12 300 3 413 313 100 42 chr2 45313383 45313693 -207942890 + LTR16A LTR ERVL 29 356 -94 213 93 70 47 chr2 45314064 45314107 -207942476 - L2 LINE L2 0 3313 3270 846 184 0 0 chr2 45314293 45314429 -207942154 + FRAM SINE Alu 4 139 -37 818 154 0 0 chr2 45314456 45314579 -207942004 + FLAM_C SINE Alu 1 123 -10 211 148 12 173 chr2 45314646 45314727 -207941856 - L2 LINE L2 -287 2985 2918 287 169 17 0 chr2 45314821 45314880 -207941703 - FLAM_A SINE Alu 0 133 74 1125 168 0 6 chr2 45316606 45316779 -207939804 - FRAM SINE Alu -8 168 1 728 237 212 19 chr2 45317175 45317653 -207938930 + MLT1H1 LTR MaLR 15 555 0 1101 254 61 33 chr2 45317753 45317914 -207938669 - MLT1D LTR MaLR -64 441 286 1834 99 201 10 chr2 45317914 45318228 -207938355 - THE1C LTR MaLR -1 374 1 1101 254 61 33 chr2 45318228 45318495 -207938088 - MLT1D LTR MaLR -219 286 1 816 228 115 16 chr2 45318522 45318903 -207937680 + MER65B LTR ERV1 1 514 -17 9563 144 52 111 chr2 45319055 45320509 -207936074 + L1M4c LINE L1 18 1461 -4921 1258 178 5 5 chr2 45320509 45320717 -207935866 + AluJb SINE Alu 87 294 -18 9563 144 52 111 chr2 45320717 45321768 -207934815 + L1M4c LINE L1 1461 2572 -3810 1629 157 17 7 chr2 45321768 45322068 -207934515 + L1MB3 LINE L1 5879 6181 -2 446 275 104 46 chr2 45322289 45322529 -207934054 + L2 LINE L2 3048 3301 -12 2282 114 0 0 chr2 45322761 45323067 -207933516 + AluSx SINE Alu 1 306 -6 413 281 26 26 chr2 45323301 45323415 -207933168 - MIR SINE MIR -64 144 31 1316 169 108 9 chr2 45324837 45325068 -207931515 - AluJo SINE Alu -20 292 39 1854 160 0 3 chr2 45325255 45325537 -207931046 + AluJb SINE Alu 1 281 -31 252 0 0 0 chr2 45325539 45325567 -207931016 + (CA)n Simple_repeat Simple_repeat 2 29 0 475 242 166 0 chr2 45325721 45325878 -207930705 - HAL1 LINE L1 -874 1633 1451 493 224 174 31 chr2 45325899 45326220 -207930363 - HAL1 LINE L1 -1105 1402 1036 273 29 0 0 chr2 45326455 45326489 -207930094 + (CA)n Simple_repeat Simple_repeat 1 34 0 196 277 157 12 chr2 45327386 45327469 -207929114 + MIR SINE MIR 20 114 -148 195 42 0 0 chr2 45327482 45327506 -207929077 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 266 253 96 0 chr2 45327521 45327604 -207928979 + MIR SINE MIR 111 201 -61 471 35 0 0 chr2 45328070 45328127 -207928456 + (CA)n Simple_repeat Simple_repeat 2 58 0 207 0 0 0 chr2 45328935 45328958 -207927625 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 511 241 22 59 chr2 45329273 45329473 -207927110 + MIR SINE MIR 27 216 -46 190 391 36 0 chr2 45329473 45329583 -207927000 + L2 LINE L2 2502 2615 -699 188 347 92 0 chr2 45330014 45330112 -207926471 + L2 LINE L2 2678 2784 -530 481 266 44 38 chr2 45330344 45330502 -207926081 - L2 LINE L2 -1 3312 3154 372 265 0 0 chr2 45330523 45330606 -207925977 + L2 LINE L2 3190 3272 0 252 0 0 0 chr2 45331176 45331204 -207925379 + (A)n Simple_repeat Simple_repeat 1 28 0 518 253 76 83 chr2 45336294 45336752 -207919831 + L2 LINE L2 2156 2610 -704 248 258 0 0 chr2 45336862 45336928 -207919655 - MER103 DNA DNA -52 114 49 464 274 102 78 chr2 45336936 45337268 -207919315 + L2 LINE L2 2933 3272 0 413 256 98 0 chr2 45337286 45337419 -207919164 - MIR SINE MIR -16 246 101 2666 30 0 0 chr2 45337528 45337833 -207918750 + AluY SINE Alu 1 305 -6 42159 36 3 2 chr2 45338948 45344323 -207912260 - L1P LINE L1 -764 5382 1 33 66 0 0 chr2 45345079 45345140 -207911443 + AT_rich Low_complexity Low_complexity 1 61 0 335 269 102 0 chr2 45345362 45345470 -207911113 + L2 LINE L2 3195 3313 0 526 191 130 0 chr2 45346151 45346266 -207910317 + AluJo SINE Alu 7 136 -176 1207 199 17 0 chr2 45346593 45346824 -207909759 - MER46A DNA MER2_type 0 236 2 21 0 0 0 chr2 45346889 45346910 -207909673 + AT_rich Low_complexity Low_complexity 1 21 0 3850 176 20 65 chr2 45347973 45348567 -207908016 - L1MB8 LINE L1 -6 6172 5553 1357 218 66 33 chr2 45348567 45348929 -207907654 + MLT1A2 LTR MaLR 1 374 0 3850 176 20 65 chr2 45348929 45349649 -207906934 - L1MB8 LINE L1 -625 5553 4915 915 270 98 39 chr2 45349728 45350128 -207906455 + L1ME LINE L1 5258 5696 -468 1296 149 63 0 chr2 45350128 45350349 -207906234 - MER46A DNA MER2_type 0 236 2 915 270 98 39 chr2 45350349 45350456 -207906127 + L1ME LINE L1 5696 5795 -369 27 32 5 0 chr2 45350502 45350574 -207906009 + AT_rich Low_complexity Low_complexity 1 41 0 193 98 49 0 chr2 45350672 45350713 -207905870 + (TA)n Simple_repeat Simple_repeat 2 44 0 25 31 0 0 chr2 45351901 45351933 -207904650 + AT_rich Low_complexity Low_complexity 1 32 0 641 216 0 8 chr2 45351944 45352078 -207904505 + FLAM_A SINE Alu 1 133 0 1509 180 3 63 chr2 45352084 45352384 -207904199 + AluJb SINE Alu 1 282 -30 209 57 29 0 chr2 45352388 45352423 -207904160 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 198 261 29 29 chr2 45352937 45353006 -207903577 + MIR SINE MIR 20 88 -120 28 0 0 0 chr2 45353606 45353634 -207902949 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 28 chr2 45353658 45353669 -207902914 + AT_rich Low_complexity Low_complexity 1 11 -24 3095 83 51 7 chr2 45353669 45354103 -207902480 + MLT2A2 LTR ERVL 1 453 0 25 0 0 28 chr2 45354103 45354127 -207902456 + AT_rich Low_complexity Low_complexity 11 35 0 2155 135 0 0 chr2 45356036 45356340 -207900243 + AluSx SINE Alu 1 304 -8 846 297 61 11 chr2 45356350 45356710 -207899873 + HAL1b LINE L1 269 646 -702 3819 217 51 48 chr2 45357002 45357547 -207899036 - L1MB8 LINE L1 -1946 4200 3658 2140 120 7 3 chr2 45357547 45357847 -207898736 - AluSq SINE Alu -12 301 1 3819 217 51 48 chr2 45357847 45358623 -207897960 - L1MB8 LINE L1 -2488 3658 2875 337 277 146 23 chr2 45358815 45358945 -207897638 + L2 LINE L2 3164 3309 -4 1337 211 131 18 chr2 45359538 45359973 -207896610 - MLT1D LTR MaLR -19 486 3 1032 239 99 35 chr2 45359976 45360398 -207896185 + L1MC4 LINE L1 7353 7801 -241 2190 99 24 3 chr2 45360457 45360751 -207895832 + AluSx SINE Alu 1 300 -12 2212 95 0 3 chr2 45361107 45361403 -207895180 + AluY SINE Alu 1 295 -16 21 0 0 0 chr2 45362124 45362145 -207894438 + AT_rich Low_complexity Low_complexity 1 21 0 2186 91 14 0 chr2 45362649 45362936 -207893647 + AluSq SINE Alu 1 291 -22 225 313 60 37 chr2 45362977 45363111 -207893472 + L2 LINE L2 3158 3294 -19 621 264 22 27 chr2 45363329 45363515 -207893068 + MIR SINE MIR 11 192 -62 21 0 0 0 chr2 45363527 45363548 -207893035 + AT_rich Low_complexity Low_complexity 1 21 0 623 200 0 0 chr2 45364078 45364188 -207892395 + FLAM_C SINE Alu 17 126 -17 26 0 0 0 chr2 45364188 45364214 -207892369 + AT_rich Low_complexity Low_complexity 1 26 0 1495 185 10 43 chr2 45364267 45364570 -207892013 - AluJb SINE Alu -11 301 9 269 83 0 0 chr2 45364623 45364659 -207891924 + U2 snRNA snRNA 1 36 -152 231 232 360 8 chr2 45364685 45364810 -207891773 - MIR SINE MIR -71 191 23 1577 201 0 0 chr2 45366275 45366549 -207890034 + AluJo SINE Alu 1 274 -38 1564 142 4 4 chr2 45366551 45366783 -207889800 - AluSg/x SINE Alu -10 302 71 205 288 30 0 chr2 45367456 45367522 -207889061 + L2 LINE L2 2593 2660 -654 1408 168 9 5 chr2 45370540 45370754 -207885829 + AluJo SINE Alu 73 287 -25 262 197 61 0 chr2 45370769 45370835 -207885748 + L1ME1 LINE L1 6011 6080 -86 1891 115 18 7 chr2 45370836 45371137 -207885446 - AluSx SINE Alu 0 304 1 367 145 40 13 chr2 45371441 45371517 -207885066 + L1MB8 LINE L1 6069 6146 -32 214 326 74 42 chr2 45371668 45371763 -207884820 + MIR SINE MIR 36 133 -75 21 36 0 0 chr2 45371859 45371887 -207884696 + AT_rich Low_complexity Low_complexity 1 28 0 1653 183 0 14 chr2 45371954 45372249 -207884334 - AluJo SINE Alu -10 302 12 337 247 0 41 chr2 45373272 45373369 -207883214 + L1ME4a LINE L1 5991 6083 -38 21 57 0 19 chr2 45373413 45373449 -207883134 + AT_rich Low_complexity Low_complexity 1 37 -15 1645 174 33 27 chr2 45373449 45373748 -207882835 - AluJo SINE Alu -11 301 1 21 57 0 19 chr2 45373748 45373764 -207882819 + AT_rich Low_complexity Low_complexity 37 52 0 349 289 84 59 chr2 45373956 45374148 -207882435 + MIR SINE MIR 7 208 -54 2215 102 0 0 chr2 45374148 45374431 -207882152 - AluSc SINE Alu -26 283 1 349 289 84 59 chr2 45374431 45374477 -207882106 + MIR SINE MIR 208 251 -11 463 270 117 70 chr2 45374824 45375209 -207881374 + MLT1J LTR MaLR 28 430 -81 2233 88 0 50 chr2 45375323 45375640 -207880943 - AluSc SINE Alu -8 301 1 2853 134 46 7 chr2 45375827 45376366 -207880217 + L1MB2 LINE L1 5569 6128 -43 1742 91 30 23 chr2 45376366 45376612 -207879971 + L1PB1 LINE L1 5884 6149 -2 22 56 0 0 chr2 45376612 45376648 -207879935 + AT_rich Low_complexity Low_complexity 1 36 0 300 238 66 83 chr2 45376694 45376875 -207879708 + L1ME4a LINE L1 5837 6014 -107 1779 92 118 7 chr2 45377173 45377444 -207879139 + AluSc SINE Alu 1 301 -8 2044 131 0 13 chr2 45377817 45378122 -207878461 + AluJb SINE Alu 2 302 -10 946 174 52 28 chr2 45379226 45379439 -207877144 - MER20 DNA MER1_type -1 218 1 549 305 199 54 chr2 45379743 45380408 -207876175 + L3 LINE CR1 523 1307 -270 2515 53 0 0 chr2 45380408 45380710 -207875873 - AluY SINE Alu -9 302 1 549 305 199 54 chr2 45380710 45380781 -207875802 + L3 LINE CR1 1307 1366 -211 836 317 100 11 chr2 45380882 45381321 -207875262 + L2 LINE L2 2836 3313 0 265 315 0 34 chr2 45381332 45381421 -207875162 + L3 LINE CR1 1476 1561 -16 2078 72 4 4 chr2 45383192 45383457 -207873126 - AluSg SINE Alu -43 267 3 417 20 0 0 chr2 45433624 45433674 -207822909 + (TG)n Simple_repeat Simple_repeat 2 51 0 1807 116 0 63 chr2 45435212 45435344 -207821239 + AluJb SINE Alu 3 142 -170 225 0 0 0 chr2 45435344 45435369 -207821214 + (TA)n Simple_repeat Simple_repeat 1 25 0 1807 116 0 63 chr2 45435369 45435537 -207821046 + AluJb SINE Alu 142 284 -28 303 28 0 0 chr2 45435537 45435573 -207821010 + (CAT)n Simple_repeat Simple_repeat 2 37 0 2359 84 0 0 chr2 45435624 45435922 -207820661 + AluSc SINE Alu 1 298 -11 2763 136 15 32 chr2 45437051 45437448 -207819135 - L1MB7 LINE L1 -16 6168 5781 2284 124 0 0 chr2 45437448 45437754 -207818829 - AluSx SINE Alu -6 306 1 2763 136 15 32 chr2 45437754 45437884 -207818699 - L1MB7 LINE L1 -403 5781 5650 1406 156 78 28 chr2 45438009 45438291 -207818292 - AluJo SINE Alu -16 296 1 6230 167 42 38 chr2 45438291 45438571 -207818012 - L1MB7 LINE L1 -579 5605 5328 1754 156 3 40 chr2 45438571 45438892 -207817691 - AluJb SINE Alu -3 309 1 6230 167 42 38 chr2 45438892 45439188 -207817395 - L1MB7 LINE L1 -856 5328 5035 1597 90 36 5 chr2 45439188 45439411 -207817172 - MER30 DNA MER1_type 0 230 1 6230 167 42 38 chr2 45439411 45440569 -207816014 - L1MB7 LINE L1 -1149 5035 3841 238 245 28 75 chr2 45442131 45442237 -207814346 - MIR SINE MIR -63 199 99 28 29 0 0 chr2 45442433 45442468 -207814115 + AT_rich Low_complexity Low_complexity 1 35 0 436 333 0 0 chr2 45443153 45443276 -207813307 - L2 LINE L2 0 3313 3191 1537 156 42 3 chr2 45443282 45443590 -207812993 + MER33 DNA MER1_type 5 324 0 297 299 102 28 chr2 45444129 45444306 -207812277 + L2 LINE L2 1860 2049 -1265 21 0 0 0 chr2 45444491 45444512 -207812071 + AT_rich Low_complexity Low_complexity 1 21 0 180 179 0 0 chr2 45444592 45444631 -207811952 + T-rich Low_complexity Low_complexity 1 39 0 339 214 99 38 chr2 45444871 45445002 -207811581 - MIR SINE MIR -3 259 121 947 241 17 9 chr2 45445004 45445236 -207811347 - MIR SINE MIR -24 238 5 531 260 39 34 chr2 45445715 45445906 -207810677 - MIR SINE MIR -35 227 38 2174 109 0 0 chr2 45445975 45446285 -207810298 - AluSg SINE Alu 0 310 1 369 0 0 0 chr2 45446359 45446400 -207810183 + (TG)n Simple_repeat Simple_repeat 1 41 0 2062 115 4 0 chr2 45446400 45446678 -207809905 - AluSx SINE Alu -33 279 1 2113 119 61 0 chr2 45447938 45448231 -207808352 - AluSx SINE Alu -1 311 1 2316 113 0 3 chr2 45448434 45448743 -207807840 - AluSg SINE Alu -2 308 1 285 29 0 0 chr2 45448944 45448978 -207807605 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 1124 68 0 0 chr2 45449033 45449165 -207807418 - AluSg1 SINE Alu -177 132 1 260 276 58 0 chr2 45449510 45449597 -207806986 + MIR SINE MIR 89 180 -82 267 255 52 52 chr2 45449641 45449794 -207806789 - HAL1 LINE L1 -1542 965 813 4590 241 95 21 chr2 45450220 45451941 -207804642 + HAL1 LINE L1 528 2375 -132 2262 75 0 7 chr2 45451983 45452291 -207804292 - AluSc SINE Alu 0 306 1 22 0 0 0 chr2 45452360 45452382 -207804201 + AT_rich Low_complexity Low_complexity 1 22 0 1320 128 12 97 chr2 45452398 45452540 -207804043 + AluJo SINE Alu 8 120 -192 2175 114 0 19 chr2 45452540 45452847 -207803736 + AluSx SINE Alu 1 301 -11 1320 128 12 97 chr2 45452847 45452961 -207803622 + AluJo SINE Alu 120 242 -70 206 32 32 0 chr2 45452975 45453006 -207803577 + (TAA)n Simple_repeat Simple_repeat 2 33 0 2149 123 7 0 chr2 45453760 45454052 -207802531 - AluSx SINE Alu -18 294 1 385 193 68 130 chr2 45454388 45454435 -207802148 - MLT1H1 LTR MaLR -7 548 500 499 125 45 0 chr2 45454435 45454523 -207802060 + L1MA8 LINE L1 6198 6289 -2 2321 110 0 3 chr2 45454531 45454840 -207801743 + AluSq SINE Alu 1 308 -5 385 193 68 130 chr2 45454840 45454975 -207801608 - MLT1H1 LTR MaLR -62 493 369 236 158 0 0 chr2 45455055 45455093 -207801490 - Alu SINE Alu -262 58 21 254 175 0 0 chr2 45455095 45455135 -207801448 - AluSg/x SINE Alu -122 178 139 460 277 227 16 chr2 45455136 45455392 -207801191 - MLT1H1 LTR MaLR -203 352 43 2657 191 34 19 chr2 45456170 45456700 -207799883 - MLT1F LTR MaLR 0 542 5 1890 134 0 72 chr2 45456757 45457092 -207799491 - AluJb SINE Alu 0 312 2 1990 112 38 3 chr2 45457368 45457655 -207798928 - AluSx SINE Alu -15 297 1 2292 206 34 7 chr2 45457675 45458237 -207798346 - L1ME1 LINE L1 0 6166 5590 41345 29 21 1 chr2 45458268 45464294 -207792289 - L1PA2 LINE L1 -3 6152 1 1476 202 34 18 chr2 45464298 45464679 -207791904 - L1ME1 LINE L1 -562 5604 5219 453 260 39 7 chr2 45464755 45464909 -207791674 - L1ME1 LINE L1 -937 5209 5051 264 250 87 19 chr2 45464928 45465032 -207791551 - L1ME1 LINE L1 -1162 4984 4874 3771 168 21 14 chr2 45465033 45465753 -207790830 + L1MB7 LINE L1 5441 6165 -19 2035 155 3 0 chr2 45465816 45466125 -207790458 - AluSx SINE Alu -2 310 1 242 329 18 18 chr2 45466289 45466453 -207790130 - L1ME LINE L1 -342 5779 5616 717 192 0 0 chr2 45466485 45466605 -207789978 + FLAM_A SINE Alu 1 120 -13 304 255 29 0 chr2 45467003 45467105 -207789478 + L1MB7 LINE L1 5325 5429 -2379 871 126 25 25 chr2 45467109 45467268 -207789315 + L1MB7 LINE L1 6004 6162 -22 829 132 0 8 chr2 45467504 45467625 -207788958 - AluSg/x SINE Alu -17 293 174 478 322 58 43 chr2 45467682 45468197 -207788386 + HAL1b LINE L1 115 637 -711 4855 229 88 17 chr2 45468271 45468771 -207787812 - L1ME1 LINE L1 -1286 4860 4397 2179 100 3 19 chr2 45468771 45469080 -207787503 - AluSq SINE Alu -9 304 1 4855 229 88 17 chr2 45469080 45470235 -207786348 - L1ME1 LINE L1 -1749 4397 3088 604 223 15 56 chr2 45470865 45471062 -207785521 - L1MC5 LINE L1 -44 7917 7729 226 213 25 50 chr2 45471058 45471138 -207785445 - L1ME LINE L1 -301 5820 5743 * 337 342 179 5 chr2 45471434 45471630 -207784953 - MIR SINE MIR -13 249 20 2226 131 0 0 chr2 45472496 45472793 -207783790 + AluSx SINE Alu 1 297 -15 1005 168 44 40 chr2 45472862 45473136 -207783447 - MER33 DNA MER1_type -6 318 44 7191 56 3 58 chr2 45474996 45475980 -207780603 - SVA Other Other -6 1380 451 4474 44 9 9 chr2 45476081 45476646 -207779937 - SVA Other Other -821 565 1 283 326 34 0 chr2 45477087 45477265 -207779318 + L1ME LINE L1 5678 5861 -260 2235 122 20 0 chr2 45477376 45477680 -207778903 - AluSx SINE Alu -2 310 1 615 184 72 8 chr2 45477729 45477854 -207778729 - AluJo SINE Alu -177 135 3 195 247 144 62 chr2 45477887 45477984 -207778599 + MIR3 SINE MIR 98 202 -6 1120 122 4 122 chr2 45478050 45478320 -207778263 + L1MA6 LINE L1 6063 6300 0 213 233 0 0 chr2 45479337 45479380 -207777203 + CT-rich Low_complexity Low_complexity 2 44 0 739 177 79 59 chr2 45479835 45480140 -207776443 - L1MC5 LINE L1 -44 7917 7607 1764 144 76 118 chr2 45480173 45480207 -207776376 - L1MB5 LINE L1 -7 6167 6133 2173 90 10 3 chr2 45480207 45480495 -207776088 - AluSg SINE Alu -20 290 1 1764 144 76 118 chr2 45480495 45480830 -207775753 - L1MB5 LINE L1 -41 6133 5826 207 0 0 0 chr2 45480830 45480853 -207775730 + (CA)n Simple_repeat Simple_repeat 2 24 0 1764 144 76 118 chr2 45480853 45481032 -207775551 - L1MB5 LINE L1 -348 5826 5641 2222 95 24 0 chr2 45481033 45481329 -207775254 - AluSp SINE Alu -10 303 1 951 198 99 61 chr2 45481343 45481738 -207774845 - L1MC5 LINE L1 -370 7591 7182 1392 172 38 41 chr2 45481749 45482092 -207774491 - L1MC1 LINE L1 0 6333 5992 195 129 0 0 chr2 45482097 45482128 -207774455 + (TTCCC)n Simple_repeat Simple_repeat 3 33 0 209 176 0 0 chr2 45482227 45482261 -207774322 + CT-rich Low_complexity Low_complexity 3 36 0 1700 170 0 56 chr2 45483313 45483636 -207772947 - AluJo SINE Alu -7 305 1 2199 123 0 0 chr2 45483993 45484387 -207772196 - AluSx SINE Alu 0 394 1 25 0 0 0 chr2 45484863 45484888 -207771695 + AT_rich Low_complexity Low_complexity 1 25 0 5173 117 16 8 chr2 45484888 45485674 -207770909 - L1PA16 LINE L1 -9 6157 5363 1748 186 0 19 chr2 45485674 45485991 -207770592 - AluJb SINE Alu -1 311 1 5173 117 16 8 chr2 45485991 45486033 -207770550 - L1PA16 LINE L1 -803 5363 5323 608 171 0 0 chr2 45486034 45486151 -207770432 + L1 LINE L1 5161 5277 -869 2845 198 13 48 chr2 45486494 45487114 -207769469 - MER77 LTR ERV1 -7 598 1 2134 180 60 10 chr2 45489038 45489540 -207767043 - LTR27 LTR ERV1 0 501 3 23 33 0 0 chr2 45489570 45489600 -207766983 + AT_rich Low_complexity Low_complexity 1 30 0 591 119 0 0 chr2 45489629 45489713 -207766870 - AluJ/FLAM SINE Alu -228 84 1 460 282 8 24 chr2 45489713 45489837 -207766746 + L2 LINE L2 3192 3313 0 1630 146 26 68 chr2 45490807 45491115 -207765468 - AluSg SINE Alu -15 295 1 2334 73 3 0 chr2 45491350 45491639 -207764944 + AluY SINE Alu 17 306 -5 27 73 0 0 chr2 45492943 45492998 -207763585 + AT_rich Low_complexity Low_complexity 1 55 0 1816 137 13 61 chr2 45494081 45494394 -207762189 + AluJo SINE Alu 1 298 -14 31 88 0 0 chr2 45495590 45495670 -207760913 + AT_rich Low_complexity Low_complexity 1 80 0 2036 160 0 3 chr2 45496126 45496439 -207760144 - AluJb SINE Alu 0 312 1 1046 133 7 0 chr2 45497287 45497438 -207759145 - FRAM SINE Alu -30 146 1 1992 94 12 0 chr2 45498550 45498806 -207757777 - AluSx SINE Alu -19 293 35 2115 132 0 13 chr2 45499657 45499961 -207756622 - AluSq SINE Alu -13 300 1 198 0 0 0 chr2 45500417 45500439 -207756144 + (T)n Simple_repeat Simple_repeat 1 22 0 225 0 0 0 chr2 45501806 45501831 -207754752 + (T)n Simple_repeat Simple_repeat 1 25 0 1641 150 3 75 chr2 45501959 45502269 -207754314 + L1MB2 LINE L1 5836 6118 -53 2387 91 0 7 chr2 45502269 45502576 -207754007 + AluY SINE Alu 1 305 -6 1641 150 3 75 chr2 45502576 45502626 -207753957 + L1MB2 LINE L1 6118 6170 -1 1909 175 0 6 chr2 45503133 45503447 -207753136 - AluJo SINE Alu 0 312 1 1675 169 51 0 chr2 45503520 45503793 -207752790 - AluSx SINE Alu -21 291 5 205 368 35 35 chr2 45503908 45504022 -207752561 - L2 LINE L2 -40 3232 3119 2497 66 0 3 chr2 45504805 45505106 -207751477 + AluSg SINE Alu 1 300 -10 1064 262 222 15 chr2 45505971 45506602 -207749981 + L2 LINE L2 2513 3275 -38 364 238 166 20 chr2 45506614 45506765 -207749818 + MIR3 SINE MIR 33 205 -3 2074 68 0 0 chr2 45507483 45507731 -207748852 + AluSc SINE Alu 39 286 -23 216 0 0 0 chr2 45508474 45508498 -207748085 + (T)n Simple_repeat Simple_repeat 1 24 0 2399 69 0 10 chr2 45509499 45509804 -207746779 + AluY SINE Alu 1 302 -9 361 309 32 77 chr2 45510377 45510717 -207745866 + L1ME4a LINE L1 5067 5391 -755 292 258 32 0 chr2 45511019 45511112 -207745471 + L1ME4a LINE L1 5615 5710 -411 521 187 90 0 chr2 45511125 45511259 -207745324 - L1ME2 LINE L1 -1 6163 6018 306 288 85 0 chr2 45511261 45511438 -207745145 + L1ME4a LINE L1 5703 5894 -227 309 165 289 8 chr2 45511464 45511585 -207744998 + L1ME4a LINE L1 5949 6103 -18 244 325 48 64 chr2 45512575 45512886 -207743697 - L2 LINE L2 0 3272 2926 2057 131 13 0 chr2 45512893 45513191 -207743392 + AluSq SINE Alu 9 310 -3 366 314 176 33 chr2 45513245 45513784 -207742799 - L2 LINE L2 -492 2822 2207 244 341 168 6 chr2 45514309 45514476 -207742107 - L2 LINE L2 -1975 1339 1146 441 220 28 50 chr2 45514682 45514823 -207741760 - L1MC5 LINE L1 -61 7900 7763 2017 146 0 0 chr2 45515024 45515338 -207741245 + AluSx SINE Alu 1 314 0 1111 202 15 19 chr2 45515542 45515804 -207740779 + MIR SINE MIR 1 261 -1 2316 88 0 3 chr2 45516146 45516441 -207740142 + AluSc SINE Alu 1 294 -15 301 237 79 0 chr2 45517032 45517108 -207739475 + L2 LINE L2 3136 3217 -55 2118 109 10 0 chr2 45517332 45517626 -207738957 - AluSx SINE Alu -15 297 1 256 170 0 0 chr2 45517736 45517789 -207738794 - L1PB4 LINE L1 0 6156 6104 525 247 31 12 chr2 45517887 45518049 -207738534 - L1PB4 LINE L1 -1 6155 5991 211 292 69 14 chr2 45518047 45518119 -207738464 + L2 LINE L2 3190 3265 -7 * 1303 139 27 0 chr2 45518173 45518396 -207738187 - L1PA16 LINE L1 0 6166 5938 1907 167 0 10 chr2 45519490 45519795 -207736788 + AluJo SINE Alu 1 302 -10 1508 132 0 18 chr2 45519942 45520161 -207736422 + AluJo SINE Alu 85 299 -13 297 284 43 26 chr2 45520394 45520510 -207736073 - MLT2E LTR ERVL -479 149 32 26 30 0 0 chr2 45520676 45520709 -207735874 + AT_rich Low_complexity Low_complexity 1 33 0 2564 171 34 28 chr2 45521105 45521642 -207734941 - MER34 LTR ERV1 -2 540 1 1617 231 170 19 chr2 45521642 45522208 -207734375 - L2 LINE L2 -538 2776 2126 4762 123 33 16 chr2 45522762 45523526 -207733057 - LTR19C LTR ERV1 0 779 3 1772 136 16 60 chr2 45523725 45524042 -207732541 + AluJo SINE Alu 9 311 -1 2385 85 3 3 chr2 45525020 45525325 -207731258 + AluSc SINE Alu 1 305 -4 445 265 205 10 chr2 45525519 45525719 -207730864 - MIR SINE MIR -15 247 9 278 370 25 0 chr2 45525892 45526011 -207730572 + L1ME4a LINE L1 5472 5593 -2215 2321 95 3 0 chr2 45526085 45526379 -207730204 + AluSx SINE Alu 1 295 -17 2408 94 0 0 chr2 45526480 45526779 -207729804 - AluSx SINE Alu -13 299 1 22 0 0 0 chr2 45526789 45526811 -207729772 + AT_rich Low_complexity Low_complexity 1 22 0 402 276 41 24 chr2 45526870 45527040 -207729543 + L1ME4a LINE L1 5703 5875 -246 23 33 0 0 chr2 45527222 45527252 -207729331 + AT_rich Low_complexity Low_complexity 1 30 0 1361 131 23 0 chr2 45528072 45528286 -207728297 - MER30 DNA MER1_type 0 230 12 2088 138 0 0 chr2 45528318 45528616 -207727967 - AluSx SINE Alu -14 298 1 1424 98 75 0 chr2 45528971 45529185 -207727398 + L1PB1 LINE L1 5915 6144 -7 226 367 90 39 chr2 45529828 45529999 -207726584 + L2 LINE L2 449 610 -2704 2212 109 3 0 chr2 45529999 45530293 -207726290 + AluSq SINE Alu 1 295 -18 226 367 90 39 chr2 45530293 45530663 -207725920 + L2 LINE L2 610 1018 -2296 229 216 0 20 chr2 45530914 45530965 -207725618 + L2 LINE L2 1375 1424 -1890 2283 99 0 10 chr2 45530998 45531301 -207725282 + AluSc SINE Alu 1 300 -9 547 211 111 47 chr2 45531495 45531774 -207724809 + L1MC5 LINE L1 7631 7927 -34 441 266 27 21 chr2 45532010 45532198 -207724385 - L1MC5 LINE L1 -32 7929 7741 5835 140 9 6 chr2 45532278 45532798 -207723785 + L1MA4 LINE L1 5259 5779 -521 1951 108 3 86 chr2 45532798 45533123 -207723460 + AluSx SINE Alu 1 298 -14 5835 140 9 6 chr2 45533123 45533638 -207722945 + L1MA4 LINE L1 5779 6291 -9 249 301 180 0 chr2 45533667 45533923 -207722660 + L1 LINE L1 3791 4092 -2054 32 75 0 0 chr2 45533928 45533995 -207722588 + AT_rich Low_complexity Low_complexity 1 67 0 340 345 24 18 chr2 45534041 45534209 -207722374 + L1 LINE L1 4205 4373 -1773 2588 245 67 25 chr2 45534254 45534473 -207722110 + L1MEc LINE L1 124 332 -6064 1818 126 50 0 chr2 45534473 45534751 -207721832 + AluSx SINE Alu 4 295 -17 2588 245 67 25 chr2 45534751 45535315 -207721268 + L1MEc LINE L1 332 954 -5442 1479 244 120 38 chr2 45535315 45535816 -207720767 - MLT1F LTR MaLR 0 542 1 2588 245 67 25 chr2 45535816 45535955 -207720628 + L1MEc LINE L1 954 1086 -5310 876 230 0 0 chr2 45535953 45536162 -207720421 - L1M4 LINE L1 -3662 2484 2276 * 290 200 13 13 chr2 45536480 45536555 -207720028 - L1ME4a LINE L1 0 6121 6047 2166 93 4 0 chr2 45536825 45537104 -207719479 - AluSq SINE Alu -29 284 5 324 341 121 12 chr2 45537161 45537334 -207719249 - L1MC/D LINE L1 -722 5520 5329 356 208 13 0 chr2 45537399 45537476 -207719107 - MER69 DNA AcHobo 0 2526 2449 * 423 171 120 8 chr2 45537471 45537588 -207718995 - MER69 DNA AcHobo -1079 147 18 282 239 76 11 chr2 45537874 45537966 -207718617 + L2 LINE L2 3134 3231 -82 325 211 122 16 chr2 45538324 45538447 -207718136 - L1ME4a LINE L1 -35 6086 5951 2149 131 0 19 chr2 45539905 45540219 -207716364 - AluSx SINE Alu -4 308 1 336 307 39 117 chr2 45542216 45542473 -207714110 - L2 LINE L2 -1 3271 3035 2186 118 7 0 chr2 45542505 45542836 -207713747 + AluJb SINE Alu 3 335 0 2196 117 0 19 chr2 45542949 45543256 -207713327 + AluSx SINE Alu 1 301 -11 483 214 145 8 chr2 45543256 45543377 -207713206 - MIR3 SINE MIR -11 197 55 1899 138 0 45 chr2 45544139 45544450 -207712133 + AluSx SINE Alu 1 297 -15 204 40 0 0 chr2 45544451 45544476 -207712107 + (CA)n Simple_repeat Simple_repeat 2 26 0 2184 62 0 0 chr2 45544642 45544899 -207711684 + AluY SINE Alu 37 293 -18 408 71 0 0 chr2 45544996 45545052 -207711531 + (TC)n Simple_repeat Simple_repeat 1 56 0 296 364 69 85 chr2 45545056 45545446 -207711137 - L2 LINE L2 -20 3252 2869 782 238 22 0 chr2 45546381 45546566 -207710017 + MER5A DNA MER1_type 1 189 0 2368 100 0 0 chr2 45546675 45546974 -207709609 - AluSq SINE Alu -14 299 1 561 121 11 0 chr2 45547150 45547241 -207709342 - MER4E LTR ERV1 -252 527 436 * 1301 130 10 0 chr2 45547237 45547445 -207709138 + MER4E LTR ERV1 531 740 -26 2162 86 7 33 chr2 45548108 45548411 -207708172 + AluSx SINE Alu 1 295 -17 618 235 62 6 chr2 45548476 45548638 -207707945 - MIR SINE MIR -2 260 90 180 241 56 37 chr2 45548645 45548699 -207707884 - L3b LINE CR1 -140 1443 1389 230 369 78 0 chr2 45548724 45548827 -207707756 - L2 LINE L2 -29 3243 3133 950 245 36 0 chr2 45548863 45549112 -207707471 + MIR SINE MIR 3 260 -2 561 195 13 13 chr2 45551159 45551308 -207705275 - L1MEc LINE L1 -4000 2396 2248 369 0 0 0 chr2 45552083 45552124 -207704459 + (CA)n Simple_repeat Simple_repeat 2 42 0 629 295 79 32 chr2 45552188 45552557 -207704026 - MLT1J LTR MaLR -125 386 1 2421 89 3 0 chr2 45552785 45553088 -207703495 - AluSq SINE Alu -9 304 1 234 385 65 26 chr2 45553088 45553439 -207703144 + L2 LINE L2 2334 2698 -616 864 268 107 42 chr2 45553439 45553842 -207702741 - MLT1G1 LTR MaLR -2 593 165 1165 91 19 0 chr2 45554219 45554373 -207702210 - AluSg/x SINE Alu -20 290 134 1783 110 92 18 chr2 45554577 45554849 -207701734 + AluSx SINE Alu 1 292 -20 2502 68 3 0 chr2 45555325 45555633 -207700950 - AluY SINE Alu -2 309 1 2187 108 0 0 chr2 45556171 45556468 -207700115 - AluSx SINE Alu -15 297 1 224 118 0 39 chr2 45556762 45556813 -207699770 + (TTTTTG)n Simple_repeat Simple_repeat 2 50 0 223 299 75 0 chr2 45557247 45557314 -207699269 - L2 LINE L2 0 3272 3201 535 206 24 40 chr2 45557728 45557854 -207698729 + MIR3 SINE MIR 74 197 -11 24 0 0 0 chr2 45558114 45558138 -207698445 + AT_rich Low_complexity Low_complexity 1 24 0 2414 116 39 41 chr2 45558237 45558275 -207698308 - L1MB3 LINE L1 -10 6173 6136 2437 99 0 0 chr2 45558275 45558578 -207698005 - AluSx SINE Alu -9 303 1 2414 116 39 41 chr2 45558578 45558977 -207697606 - L1MB3 LINE L1 -47 6136 5737 1994 153 0 0 chr2 45559326 45559626 -207696957 - AluSx SINE Alu -12 300 1 384 353 27 13 chr2 45559925 45560075 -207696508 - MIR SINE MIR -109 153 2 207 0 0 0 chr2 45561311 45561334 -207695249 + (TTTTA)n Simple_repeat Simple_repeat 4 26 0 1474 147 121 23 chr2 45561344 45561609 -207694974 - AluJb SINE Alu -21 291 1 244 204 86 11 chr2 45561820 45561913 -207694670 + L1ME4a LINE L1 5975 6074 -47 296 331 51 19 chr2 45562444 45562601 -207693982 + MIR SINE MIR 92 253 -9 186 43 0 0 chr2 45563808 45563831 -207692752 + (TTTTC)n Simple_repeat Simple_repeat 4 26 0 220 375 0 0 chr2 45563853 45563925 -207692658 - L3b LINE CR1 -131 1452 1381 866 122 0 0 chr2 45564394 45564509 -207692074 - FLAM_C SINE Alu -28 115 1 1980 141 10 3 chr2 45564516 45564813 -207691770 - AluJo SINE Alu -13 299 1 2263 115 0 0 chr2 45566751 45567056 -207689527 + AluSg1 SINE Alu 1 305 -4 2124 71 60 0 chr2 45567574 45567856 -207688727 - AluY SINE Alu -12 299 1 1288 101 0 0 chr2 45567858 45568026 -207688557 - AluSq SINE Alu -12 301 134 2222 77 7 7 chr2 45568026 45568325 -207688258 - AluY SINE Alu -12 299 1 270 254 14 0 chr2 45568985 45569056 -207687527 - MLT1K LTR MaLR 0 588 517 312 252 8 49 chr2 45569358 45569481 -207687102 + L1ME LINE L1 5733 5850 -271 328 248 30 30 chr2 45570161 45570262 -207686321 - 7SK RNA RNA -89 104 4 185 276 17 52 chr2 45570335 45570393 -207686190 + MIR SINE MIR 207 262 0 270 286 203 66 chr2 45570791 45571018 -207685565 - MIR SINE MIR 0 262 5 21 0 0 0 chr2 45571730 45571751 -207684832 + AT_rich Low_complexity Low_complexity 1 21 0 190 309 96 11 chr2 45572995 45573089 -207683494 - MIR SINE MIR -38 224 123 265 196 0 0 chr2 45573105 45573161 -207683422 + L2 LINE L2 3257 3312 -1 * 275 311 28 19 chr2 45573156 45573262 -207683321 - MIR SINE MIR -130 132 26 1098 136 49 162 chr2 45573390 45573591 -207682992 - AluJo SINE Alu 0 312 90 2125 125 0 52 chr2 45573591 45573920 -207682663 - AluSx SINE Alu 0 312 1 1098 136 49 162 chr2 45573920 45573951 -207682632 - AluJo SINE Alu -222 90 57 1156 60 0 0 chr2 45573951 45574101 -207682482 - L1PA6 LINE L1 0 6154 6005 1098 136 49 162 chr2 45574101 45574112 -207682471 - AluJo SINE Alu -255 57 106 249 33 0 0 chr2 45574112 45574142 -207682441 + (TAG)n Simple_repeat Simple_repeat 1 30 0 1098 136 49 162 chr2 45574142 45574204 -207682379 - AluJo SINE Alu -205 107 40 24 53 0 0 chr2 45574988 45575026 -207681557 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr2 45575926 45575956 -207680627 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 45576028 45576049 -207680534 + AT_rich Low_complexity Low_complexity 1 21 0 1729 155 39 7 chr2 45576085 45576369 -207680214 - AluJb SINE Alu -19 293 1 213 39 0 0 chr2 45576700 45576726 -207679857 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 1798 166 0 32 chr2 45576890 45577198 -207679385 + AluJb SINE Alu 2 299 -13 1312 300 135 47 chr2 45577342 45578775 -207677808 - L2 LINE L2 -1 3271 87 1894 143 7 7 chr2 45579000 45579300 -207677283 + AluSx SINE Alu 1 300 -12 196 260 60 0 chr2 45579350 45579400 -207677183 + MIR3 SINE MIR 142 194 -14 2240 109 0 0 chr2 45579512 45579816 -207676767 - AluY SINE Alu -6 305 2 252 111 0 0 chr2 45579907 45579952 -207676631 + (TG)n Simple_repeat Simple_repeat 2 46 0 402 264 66 12 chr2 45580006 45580173 -207676410 - L1ME4a LINE L1 -255 5866 5691 25 75 0 0 chr2 45580460 45580513 -207676070 + AT_rich Low_complexity Low_complexity 1 53 0 2041 145 0 0 chr2 45580615 45580922 -207675661 + AluSx SINE Alu 1 307 0 2307 80 20 0 chr2 45582348 45582649 -207673934 - AluSp SINE Alu -6 307 1 2038 160 0 3 chr2 45582931 45583243 -207673340 + AluJb SINE Alu 1 311 -1 1996 135 24 42 chr2 45583253 45583371 -207673212 + L1MB2 LINE L1 5798 5917 -254 1827 115 0 0 chr2 45583371 45583614 -207672969 + AluSq SINE Alu 5 247 -66 184 30 61 0 chr2 45583614 45583647 -207672936 + A-rich Low_complexity Low_complexity 3 37 0 1996 135 24 42 chr2 45583647 45583906 -207672677 + L1MB2 LINE L1 5915 6169 -2 1770 161 61 0 chr2 45584117 45584397 -207672186 - AluJb SINE Alu -15 297 1 2095 64 0 89 chr2 45584455 45584769 -207671814 + AluY SINE Alu 24 309 -2 1587 179 15 62 chr2 45586526 45586850 -207669733 - AluJo SINE Alu -3 309 1 258 209 164 15 chr2 45588494 45588628 -207667955 - L1ME4a LINE L1 0 6121 5968 1740 158 0 30 chr2 45588848 45589145 -207667438 + AluJo SINE Alu 1 288 -24 21 57 0 0 chr2 45589911 45589946 -207666637 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr2 45590247 45590276 -207666307 + AT_rich Low_complexity Low_complexity 1 29 0 3563 174 83 21 chr2 45590422 45591107 -207665476 - L1MB3 LINE L1 -3 6180 5539 2204 114 13 0 chr2 45591107 45591405 -207665178 + AluSx SINE Alu 1 302 -10 3563 174 83 21 chr2 45591405 45591516 -207665067 - L1MB3 LINE L1 -644 5539 5436 823 136 0 57 chr2 45591516 45591656 -207664927 - FLAM_C SINE Alu -1 132 1 3563 174 83 21 chr2 45591656 45591701 -207664882 - L1MB3 LINE L1 -747 5436 5286 313 308 208 0 chr2 45591825 45591945 -207664638 + MIR SINE MIR 49 193 -69 2236 102 0 0 chr2 45593139 45593432 -207663151 + AluSc SINE Alu 1 293 -16 955 190 0 6 chr2 45594102 45594265 -207662318 + FRAM SINE Alu 1 162 -4 1103 231 12 4 chr2 45595113 45595356 -207661227 + MIR SINE MIR 17 261 -1 2303 113 7 0 chr2 45595431 45595733 -207660850 - AluSg SINE Alu -6 304 1 1790 156 50 3 chr2 45595759 45596041 -207660542 + AluJb SINE Alu 1 295 -17 1466 193 24 31 chr2 45596935 45597225 -207659358 + AluJo SINE Alu 1 288 -24 628 336 173 15 chr2 45597254 45597659 -207658924 + L3 LINE CR1 1102 1570 -7 225 302 40 8 chr2 45597947 45598073 -207658510 + MARNA DNA Mariner 223 352 -234 280 187 220 44 chr2 45598076 45598167 -207658416 - MER94 DNA DNA 0 134 28 242 342 72 0 chr2 45598185 45598337 -207658246 + MARNA DNA Mariner 360 522 -64 21 36 0 0 chr2 45598450 45598478 -207658105 + AT_rich Low_complexity Low_complexity 1 28 0 261 30 45 45 chr2 45598980 45599046 -207657537 + (TTA)n Simple_repeat Simple_repeat 2 67 0 4411 173 30 30 chr2 45600598 45601667 -207654916 + L1MD2 LINE L1 5141 6205 -154 236 281 75 68 chr2 45602001 45602296 -207654287 - L1MC/D LINE L1 -1903 5905 5609 21 71 0 0 chr2 45603333 45603375 -207653208 + AT_rich Low_complexity Low_complexity 1 42 0 2264 103 3 10 chr2 45603786 45604097 -207652486 - AluSg1 SINE Alu 0 309 1 23 33 0 0 chr2 45605020 45605050 -207651533 + AT_rich Low_complexity Low_complexity 1 30 0 1661 161 74 0 chr2 45605349 45605634 -207650949 - AluJo SINE Alu -6 306 1 270 0 0 0 chr2 45605659 45605689 -207650894 + (A)n Simple_repeat Simple_repeat 1 30 0 229 275 121 27 chr2 45606731 45606880 -207649703 - L1MC/D LINE L1 -2036 5772 5610 324 0 0 0 chr2 45606880 45606916 -207649667 + (CA)n Simple_repeat Simple_repeat 2 37 0 1852 144 3 14 chr2 45606916 45607207 -207649376 - AluJo SINE Alu -24 288 1 2486 55 0 3 chr2 45609516 45609809 -207646774 - AluSc SINE Alu -17 292 1 963 173 0 35 chr2 45609959 45610132 -207646451 - FRAM SINE Alu -11 165 1 335 61 0 0 chr2 45610256 45610305 -207646278 - L1PA6 LINE L1 -3 6151 6103 214 225 0 0 chr2 45611272 45611312 -207645271 - L2 LINE L2 -4 3268 3229 205 178 0 0 chr2 45611578 45611623 -207644960 + T-rich Low_complexity Low_complexity 1 45 0 2242 105 10 3 chr2 45611625 45611931 -207644652 - AluSx SINE Alu -4 308 1 212 348 30 52 chr2 45614099 45614234 -207642349 - L2 LINE L2 0 3313 3182 1161 142 6 0 chr2 45614459 45614628 -207641955 - AluSg/x SINE Alu -11 301 132 2173 132 0 13 chr2 45615120 45615430 -207641153 + AluSx SINE Alu 3 308 -4 1570 113 52 118 chr2 45615464 45615543 -207641040 - MER47A DNA MER2_type -1957 366 283 2240 95 0 0 chr2 45615543 45615851 -207640732 + AluSx SINE Alu 1 308 0 1570 113 52 118 chr2 45615851 45616085 -207640498 - MER47A DNA MER2_type -2040 283 77 2174 121 27 0 chr2 45616085 45616383 -207640200 + AluSx SINE Alu 1 306 -6 1570 113 52 118 chr2 45616383 45616431 -207640152 - MER47A DNA MER2_type -2246 77 27 184 194 145 0 chr2 45616902 45616964 -207639619 + MIR SINE MIR 73 143 -119 348 219 26 52 chr2 45617208 45617363 -207639220 - L1ME4a LINE L1 -1 6120 5970 1763 174 7 7 chr2 45618576 45618869 -207637714 - AluSx SINE Alu -19 293 1 471 339 90 29 chr2 45820565 45820943 -207435640 + L3 LINE CR1 192 592 -985 2138 140 134 74 chr2 45821105 45821605 -207434978 + MER34C LTR ERV1 56 585 0 1581 146 45 26 chr2 45821607 45821875 -207434708 + AluJo SINE Alu 9 281 -31 915 192 81 94 chr2 45821954 45822259 -207434324 + LTR49 LTR ERV1 1 301 -294 283 194 28 9 chr2 45822259 45822367 -207434216 + AluY SINE Alu 2 111 -190 1714 102 0 0 chr2 45823442 45823667 -207432916 + AluSg/x SINE Alu 86 310 0 299 279 228 41 chr2 45823682 45823901 -207432682 - L2 LINE L2 -1366 1948 1689 255 56 28 0 chr2 45824450 45824486 -207432097 - U2 snRNA snRNA -147 41 5 225 100 0 0 chr2 45824576 45824606 -207431977 - Alu SINE Alu -187 113 84 1000 217 0 43 chr2 45824606 45824836 -207431747 - AluJo SINE Alu -92 220 1 436 0 51 0 chr2 45825737 45825796 -207430787 + (TTTA)n Simple_repeat Simple_repeat 3 64 0 6706 80 13 47 chr2 45825796 45827164 -207429419 - SVA Other Other -551 1363 433 2253 89 3 3 chr2 45827266 45827558 -207429025 - AluY SINE Alu -19 292 1 767 164 0 57 chr2 45827561 45827701 -207428882 - AluJo/FLAM SINE Alu -170 132 1 759 258 52 21 chr2 45827709 45828035 -207428548 - L1MC4 LINE L1 0 8042 7707 2192 125 0 6 chr2 45828044 45828357 -207428226 - AluSx SINE Alu -1 311 1 1044 174 6 0 chr2 45828359 45828526 -207428057 + MLT1A1 LTR MaLR 198 365 0 855 153 23 0 chr2 45828560 45828691 -207427892 + AluJo SINE Alu 1 134 -178 2259 106 0 0 chr2 45829115 45829408 -207427175 - AluSq SINE Alu -20 293 1 296 250 75 99 chr2 45829827 45829953 -207426630 + L1MEd LINE L1 268 387 -5732 2413 99 3 0 chr2 45829953 45830255 -207426328 + AluSq SINE Alu 1 303 -10 296 250 75 99 chr2 45830255 45830380 -207426203 + L1MEd LINE L1 387 513 -5606 280 93 0 23 chr2 45830421 45830464 -207426119 + THE1C LTR MaLR 3 44 -331 944 160 102 39 chr2 45830621 45830836 -207425747 + LTR29 LTR ERV1 311 572 -50 4173 127 61 23 chr2 45830837 45831059 -207425524 - MER50 LTR ERV1 -23 711 499 2233 127 0 0 chr2 45831059 45831359 -207425224 - AluSx SINE Alu -12 300 1 4173 127 61 23 chr2 45831359 45831821 -207424762 - MER50 LTR ERV1 -235 499 1 2149 130 0 0 chr2 45832553 45832846 -207423737 - AluSx SINE Alu -19 293 1 559 171 0 0 chr2 45832868 45832956 -207423627 - AluJ/FLAM SINE Alu -223 89 2 1097 231 67 83 chr2 45833119 45833613 -207422970 - MER34 LTR ERV1 0 542 57 506 212 68 0 chr2 45833786 45833904 -207422679 + FAM SINE Alu 42 167 -18 1672 100 97 77 chr2 45833909 45834208 -207422375 + AluSx SINE Alu 1 305 -7 231 358 20 34 chr2 45834214 45834362 -207422221 - L2 LINE L2 -191 3081 2936 1705 157 4 4 chr2 45834574 45834841 -207421742 + MER31A LTR ERV1 1 267 -218 219 103 0 0 chr2 45834850 45834879 -207421704 + (TCCC)n Simple_repeat Simple_repeat 2 30 0 665 191 6 17 chr2 45834879 45835057 -207421526 + CT-rich Low_complexity Low_complexity 2 177 0 1685 175 15 0 chr2 45835065 45835339 -207421244 - AluJo SINE Alu -34 278 1 1240 114 27 41 chr2 45835340 45835559 -207421024 + MER31A LTR ERV1 270 485 0 985 290 96 6 chr2 45835559 45835913 -207420670 + MLT1L LTR MaLR 229 615 0 1119 88 0 0 chr2 45835927 45836063 -207420520 + AluSq/x SINE Alu 1 136 -177 2302 109 0 0 chr2 45836063 45836367 -207420216 + AluSx SINE Alu 1 304 -8 540 148 0 11 chr2 45836398 45836486 -207420097 - FLAM SINE Alu -19 124 38 2321 109 0 6 chr2 45837194 45837506 -207419077 + AluSx SINE Alu 1 310 -2 573 71 39 50 chr2 45838561 45838743 -207417840 + (TA)n Simple_repeat Simple_repeat 1 180 0 1686 149 62 4 chr2 45838743 45839019 -207417564 - AluJb SINE Alu -14 298 7 2157 136 0 0 chr2 45839029 45839337 -207417246 - AluSx SINE Alu -4 308 1 1978 216 137 30 chr2 45839367 45839931 -207416652 - MLT1E3 LTR MaLR 0 624 1 2301 107 0 0 chr2 45840046 45840346 -207416237 - AluSg SINE Alu -10 300 1 235 127 18 36 chr2 45840432 45840487 -207416096 + CT-rich Low_complexity Low_complexity 3 56 0 2205 123 10 0 chr2 45840489 45840797 -207415786 - AluSx SINE Alu 0 312 2 1200 218 33 19 chr2 45841366 45841637 -207414946 + MER90 LTR ERV1 304 578 -36 401 177 0 0 chr2 45841659 45841721 -207414862 - AluJo SINE Alu -124 188 127 988 236 62 42 chr2 45841766 45842054 -207414529 + MER97a DNA MER1_type? 184 477 -417 290 186 17 0 chr2 45842126 45842185 -207414398 + MER97b DNA MER1_type? 484 543 -510 823 137 0 0 chr2 45842646 45842763 -207413820 + AluJb SINE Alu 1 117 -195 189 0 0 0 chr2 45842763 45842784 -207413799 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 363 296 31 6 chr2 45842803 45842962 -207413621 + MER97b DNA MER1_type? 886 1048 -5 291 399 56 15 chr2 45843029 45843227 -207413356 + L2 LINE L2 2992 3197 -75 2121 144 3 0 chr2 45843413 45843718 -207412865 - AluSx SINE Alu -6 306 1 748 160 6 28 chr2 45843755 45843936 -207412647 + CT-rich Low_complexity Low_complexity 4 180 0 1667 169 4 0 chr2 45843936 45844202 -207412381 - AluJb SINE Alu -45 267 1 973 109 0 34 chr2 45844689 45844836 -207411747 + FLAM_C SINE Alu 1 142 -1 1457 199 6 37 chr2 45844838 45845159 -207411424 + AluJo SINE Alu 1 311 -1 1064 105 0 0 chr2 45846169 45846302 -207410281 + AluSq/x SINE Alu 1 133 -179 452 180 0 30 chr2 45846306 45846406 -207410177 + LTR7 LTR ERV1 347 443 -7 4346 33 21 10 chr2 45846561 45847083 -207409500 - SVA Other Other -858 528 1 1249 219 107 39 chr2 45847367 45847874 -207408709 - MLT2E LTR ERVL -15 613 3 2247 103 0 32 chr2 45847963 45848275 -207408308 - AluSx SINE Alu -10 302 1 706 125 8 47 chr2 45849179 45849327 -207407256 + FLAM_C SINE Alu 3 133 0 369 0 0 0 chr2 45849659 45849700 -207406883 + (CA)n Simple_repeat Simple_repeat 2 42 0 950 139 29 0 chr2 45849729 45849866 -207406717 + AluSq/x SINE Alu 1 141 -171 942 223 0 0 chr2 45849868 45850052 -207406531 + L1M4 LINE L1 5484 5667 -511 2055 149 0 0 chr2 45850053 45850342 -207406241 + AluSx SINE Alu 1 289 -23 1647 170 30 12 chr2 45850391 45850779 -207405804 - L1M2 LINE L1 -743 5403 5034 * 2160 135 42 86 chr2 45850775 45851060 -207405523 + L1MA5 LINE L1 5460 5715 -585 1665 135 79 0 chr2 45851060 45851327 -207405256 + AluSx SINE Alu 5 292 -20 2160 135 42 86 chr2 45851327 45851544 -207405039 + L1MA5 LINE L1 5715 5940 -360 2270 93 21 0 chr2 45852102 45852392 -207404191 + AluSx SINE Alu 1 296 -16 333 117 33 33 chr2 45852627 45852687 -207403896 - MER91B DNA MER1_type -127 63 4 294 331 56 11 chr2 45853419 45853597 -207402986 - L3 LINE CR1 -334 1243 1058 1919 158 3 10 chr2 45853745 45854055 -207402528 - AluJb SINE Alu -4 308 1 203 306 28 56 chr2 45854131 45854178 -207402405 + MIR3 SINE MIR 82 129 -79 2109 143 36 33 chr2 45854178 45854541 -207402042 + THE1B LTR MaLR 1 364 0 203 306 28 56 chr2 45854541 45854601 -207401982 + MIR3 SINE MIR 129 186 -22 2331 108 0 13 chr2 45855217 45855524 -207401059 + AluSx SINE Alu 1 303 -9 1598 162 55 82 chr2 45856299 45856700 -207399883 - MLT1B LTR MaLR 0 390 1 273 286 0 0 chr2 45856730 45856800 -207399783 + L3b LINE CR1 1307 1376 -207 2299 79 6 58 chr2 45857289 45857618 -207398965 - AluSx SINE Alu 0 312 1 366 200 50 0 chr2 45858183 45858263 -207398320 - MARNA DNA Mariner -224 362 279 264 30 0 0 chr2 45859312 45859345 -207397238 + (CAA)n Simple_repeat Simple_repeat 2 34 0 639 0 0 0 chr2 45859821 45859892 -207396691 + (TTTC)n Simple_repeat Simple_repeat 2 72 0 2304 89 10 0 chr2 45859900 45860192 -207396391 - AluSq SINE Alu -18 295 1 393 320 30 40 chr2 45860416 45860616 -207395967 + MLT1J LTR MaLR 5 202 -309 265 310 43 60 chr2 45860693 45860869 -207395714 + MLT1J LTR MaLR 224 396 -115 550 159 6 27 chr2 45860869 45861006 -207395577 - MER53 DNA DNA 0 189 1 2347 75 0 40 chr2 45861127 45861448 -207395135 - AluSg1 SINE Alu -1 308 1 1625 181 39 0 chr2 45861452 45861733 -207394850 - AluJb SINE Alu -20 292 1 1095 119 19 19 chr2 45861770 45861930 -207394653 - AluSq SINE Alu -95 218 59 184 211 26 0 chr2 45863040 45863078 -207393505 + MIR SINE MIR 122 160 -102 247 189 14 81 chr2 45863098 45863172 -207393411 + MIR SINE MIR 122 190 -72 2128 121 0 26 chr2 45863741 45864047 -207392536 + AluSx SINE Alu 8 305 -7 299 205 169 0 chr2 45864047 45864130 -207392453 + MIR SINE MIR 48 144 -64 2091 96 24 7 chr2 45864136 45864428 -207392155 + AluSg SINE Alu 2 298 -12 798 216 13 70 chr2 45864866 45865093 -207391490 + MER67C LTR ERV1 123 336 -374 1324 237 70 13 chr2 45865112 45865484 -207391099 + MSTD LTR MaLR 2 394 -2 1132 144 10 10 chr2 45865489 45865684 -207390899 + MER67C LTR ERV1 516 710 0 474 240 35 146 chr2 45865787 45866074 -207390509 + MIR SINE MIR 8 262 0 27 0 0 0 chr2 45866168 45866195 -207390388 + AT_rich Low_complexity Low_complexity 1 27 0 377 306 60 23 chr2 45866422 45866494 -207390089 - L1MC4a LINE L1 -1897 5911 5843 3374 120 12 64 chr2 45866494 45866857 -207389726 - LTR26B LTR ERV1 0 531 206 1957 155 26 0 chr2 45866857 45867160 -207389423 - AluSx SINE Alu -1 311 1 3374 120 12 64 chr2 45867160 45867356 -207389227 - LTR26B LTR ERV1 -325 206 1 377 306 60 23 chr2 45867356 45867499 -207389084 - L1MC4a LINE L1 -1965 5843 5688 291 294 80 40 chr2 45867552 45867809 -207388774 - L1MC4a LINE L1 -568 5553 5283 2266 88 0 52 chr2 45867809 45868137 -207388446 - AluSx SINE Alu -1 311 1 291 294 80 40 chr2 45868137 45868155 -207388428 - L1MC4a LINE L1 -838 5283 5267 246 269 0 0 chr2 45868494 45868546 -207388037 - MLT1A1 LTR MaLR -147 218 167 1156 158 20 20 chr2 45868547 45868743 -207387840 - MLT1A1 LTR MaLR -169 196 1 278 337 60 41 chr2 45868953 45869407 -207387176 - L2 LINE L2 -224 3048 2508 2230 107 3 0 chr2 45869407 45869696 -207386887 + AluSx SINE Alu 1 290 -22 278 337 60 41 chr2 45869696 45869833 -207386750 - L2 LINE L2 -764 2508 2375 758 202 0 0 chr2 45870030 45870159 -207386424 - FLAM_C SINE Alu 0 133 5 516 239 7 43 chr2 45870191 45870329 -207386254 - MLT1K LTR MaLR -314 274 142 379 266 81 16 chr2 45870458 45870582 -207386001 + L2 LINE L2 3182 3313 0 1023 205 37 19 chr2 45870883 45871098 -207385485 + MER20 DNA MER1_type 1 219 0 1449 164 118 8 chr2 45871314 45871577 -207385006 + AluSg1 SINE Alu 1 292 -17 218 243 122 2 chr2 45872251 45872371 -207384212 + MIR SINE MIR 30 162 -78 505 227 109 0 chr2 45872519 45872647 -207383936 - FRAM SINE Alu -1 175 34 1577 162 26 0 chr2 45873484 45873756 -207382827 + AluJb SINE Alu 30 308 -4 1763 117 104 0 chr2 45874030 45874279 -207382304 + AluSx SINE Alu 21 295 -17 1400 161 85 31 chr2 45874477 45874759 -207381824 - AluJb SINE Alu 0 308 13 2064 126 0 3 chr2 45874775 45875095 -207381488 - AluSx SINE Alu 0 319 1 278 277 0 10 chr2 45875105 45875206 -207381377 - L1ME LINE L1 -299 5822 5723 191 367 50 17 chr2 45875942 45876062 -207380521 + L2 LINE L2 3133 3256 -16 695 255 42 19 chr2 45876182 45876394 -207380189 + MIR SINE MIR 29 245 -17 1751 142 106 3 chr2 45876657 45876939 -207379644 - AluJb SINE Alu -1 311 1 1997 149 10 3 chr2 45877289 45877591 -207378992 + AluSx SINE Alu 1 304 -8 288 324 66 53 chr2 45877773 45878153 -207378430 - L2 LINE L2 -81 3191 2807 2458 83 52 19 chr2 45878941 45879304 -207377279 - THE1C LTR MaLR 0 375 1 10144 102 36 16 chr2 45879305 45879397 -207377186 - THE1C-int LTR MaLR -1 1579 1490 2336 105 3 0 chr2 45879397 45879702 -207376881 + AluSx SINE Alu 5 310 -2 10144 102 36 16 chr2 45879702 45881063 -207375520 - THE1C-int LTR MaLR -90 1490 97 23 0 0 0 chr2 45881476 45881499 -207375084 + AT_rich Low_complexity Low_complexity 1 23 0 766 139 28 39 chr2 45881588 45881768 -207374815 - SVA Other Other -710 676 499 1216 185 120 51 chr2 45881768 45882119 -207374464 + LTR48 LTR ERV1 81 455 -332 678 201 105 24 chr2 45882136 45882345 -207374238 + LTR48B LTR ERV1 386 611 -33 639 233 82 78 chr2 45882388 45882543 -207374040 - LTR16A LTR ERVL -54 396 238 2126 127 0 7 chr2 45882543 45882842 -207373741 + AluSx SINE Alu 1 297 -15 639 233 82 78 chr2 45882842 45882905 -207373678 - LTR16A LTR ERVL -212 238 177 2149 100 6 45 chr2 45883553 45883717 -207372866 - AluSx SINE Alu -13 299 151 2527 73 0 0 chr2 45883717 45884018 -207372565 - AluY SINE Alu -10 301 1 2149 100 6 45 chr2 45884018 45884164 -207372419 - AluSx SINE Alu -161 151 1 2134 107 13 10 chr2 45884229 45884529 -207372054 - AluSp SINE Alu -12 301 1 1520 177 43 14 chr2 45884589 45884866 -207371717 + AluJo SINE Alu 7 291 -21 2626 134 32 21 chr2 45885203 45885673 -207370910 + L1MA5 LINE L1 5825 6299 -1 217 241 116 0 chr2 45885728 45885802 -207370781 - MIR SINE MIR -64 144 63 2125 146 0 0 chr2 45885919 45886228 -207370355 + AluSx SINE Alu 1 309 -3 816 154 8 0 chr2 45886266 45886389 -207370194 + FAM SINE Alu 41 164 -21 2017 138 11 0 chr2 45886418 45886700 -207369883 + AluSx SINE Alu 1 285 -27 231 114 0 0 chr2 45886700 45886735 -207369848 + (CA)n Simple_repeat Simple_repeat 2 36 0 256 130 0 43 chr2 45886937 45886977 -207369606 + MER3 DNA MER1_type 1 39 -165 1369 180 72 13 chr2 45886977 45887283 -207369300 + MER33 DNA MER1_type 1 324 0 2325 122 0 0 chr2 45887294 45887597 -207368986 - AluSx SINE Alu -9 303 1 619 286 27 35 chr2 45887647 45887906 -207368677 + MIR SINE MIR 6 262 0 243 0 0 0 chr2 45888077 45888104 -207368479 + (TG)n Simple_repeat Simple_repeat 1 27 0 2080 139 10 3 chr2 45888691 45888993 -207367590 + AluSx SINE Alu 1 304 -8 1830 116 102 32 chr2 45888999 45889283 -207367300 + AluSx SINE Alu 1 304 -8 378 0 0 0 chr2 45889447 45889489 -207367094 + (TG)n Simple_repeat Simple_repeat 2 43 0 978 166 0 0 chr2 45889665 45889816 -207366767 - FRAM SINE Alu -25 151 1 194 184 0 0 chr2 45889841 45889879 -207366704 - L2 LINE L2 -2 3311 3274 834 156 21 11 chr2 45889949 45890135 -207366448 - L1MA7 LINE L1 0 6291 6104 2190 129 0 3 chr2 45891501 45891810 -207364773 + AluSx SINE Alu 3 310 -2 312 288 32 8 chr2 45891933 45892058 -207364525 - MIR3 SINE MIR -14 194 67 220 204 0 0 chr2 45892692 45892746 -207363837 + T-rich Low_complexity Low_complexity 1 54 0 460 147 0 173 chr2 45892765 45892793 -207363790 - MER113 DNA MER1_type? -397 124 93 2298 108 0 0 chr2 45892793 45893090 -207363493 + AluSx SINE Alu 1 297 -15 460 147 0 173 chr2 45893090 45893116 -207363467 - MER113 DNA MER1_type? -428 93 64 1731 166 0 20 chr2 45893116 45893434 -207363149 + AluJo SINE Alu 1 312 0 460 147 0 173 chr2 45893434 45893528 -207363055 - MER113 DNA MER1_type? -457 64 1 2372 96 0 0 chr2 45893595 45893887 -207362696 - AluSg SINE Alu -18 292 1 279 245 47 57 chr2 45893887 45893993 -207362590 + MER112 DNA MER1_type 38 142 -118 1399 163 18 98 chr2 45894083 45894409 -207362174 - AluJo SINE Alu -12 300 1 239 309 72 22 chr2 45894447 45894586 -207361997 + L2 LINE L2 2561 2706 -608 1792 152 25 3 chr2 45894597 45894880 -207361703 + AluJo SINE Alu 5 293 -19 2212 112 10 0 chr2 45895294 45895589 -207360994 + AluSx SINE Alu 1 298 -14 207 264 0 0 chr2 45895966 45896019 -207360564 - L2 LINE L2 -4 3309 3257 327 180 90 67 chr2 45896019 45896108 -207360475 + 7SLRNA srpRNA srpRNA 221 311 -9 2250 61 20 10 chr2 45896369 45896662 -207359921 + AluY SINE Alu 8 303 -8 2302 82 36 7 chr2 45896759 45897063 -207359520 + AluSq SINE Alu 1 313 0 481 214 57 99 chr2 45897085 45897347 -207359236 + L1MEd LINE L1 753 1003 -5116 1223 182 50 14 chr2 45897846 45898164 -207358419 + MSTD LTR MaLR 1 391 -5 6687 231 63 29 chr2 45898167 45898678 -207357905 + MSTD-int LTR MaLR 2 494 -1241 2116 128 7 0 chr2 45898678 45898968 -207357615 - AluSx SINE Alu -20 292 1 6687 231 63 29 chr2 45898968 45899991 -207356592 + MSTD-int LTR MaLR 494 1599 -136 1946 155 3 3 chr2 45899991 45900301 -207356282 - AluJb SINE Alu -2 310 1 6687 231 63 29 chr2 45900301 45900438 -207356145 + MSTD-int LTR MaLR 1599 1730 -5 283 73 98 0 chr2 45900440 45900481 -207356102 + MSTD LTR MaLR 1 45 -383 1206 210 135 0 chr2 45900509 45900823 -207355760 + MSTD LTR MaLR 35 392 -4 1860 136 11 0 chr2 45900823 45901095 -207355488 + AluSx SINE Alu 1 275 -37 210 37 0 0 chr2 45901099 45901126 -207355457 + (CAA)n Simple_repeat Simple_repeat 1 27 0 1473 150 9 0 chr2 45901207 45901427 -207355156 + AluSg/x SINE Alu 84 305 -7 2319 212 78 118 chr2 45901954 45902149 -207354434 + L1ME3A LINE L1 5195 5396 -774 2360 75 0 0 chr2 45902149 45902492 -207354091 + AluY SINE Alu 1 343 0 495 0 33 0 chr2 45902431 45902517 -207354066 + (TAAA)n Simple_repeat Simple_repeat 2 89 0 2319 212 78 118 chr2 45902492 45902526 -207354057 + L1ME3A LINE L1 5396 5430 -740 2518 66 3 0 chr2 45902526 45902830 -207353753 + AluY SINE Alu 1 305 -6 2319 212 78 118 chr2 45902830 45903313 -207353270 + L1ME3A LINE L1 5430 5931 -239 222 62 0 0 chr2 45903313 45903345 -207353238 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 451 117 0 0 chr2 45903351 45903411 -207353172 - U6 snRNA snRNA -9 98 39 2319 212 78 118 chr2 45903411 45903666 -207352917 + L1ME3A LINE L1 5936 6162 -8 385 280 8 25 chr2 45903834 45903952 -207352631 + MIR SINE MIR 101 216 -46 1727 190 7 0 chr2 45904104 45904399 -207352184 - AluJo SINE Alu -15 297 1 322 243 14 0 chr2 45904645 45904715 -207351868 - MLT1K LTR MaLR 0 588 518 2138 92 24 20 chr2 45905744 45906036 -207350547 - AluSx SINE Alu -19 293 1 22 0 0 0 chr2 45907016 45907038 -207349545 + AT_rich Low_complexity Low_complexity 1 22 0 2128 113 3 17 chr2 45907179 45907481 -207349102 - AluSx SINE Alu -10 302 5 944 75 22 0 chr2 45907687 45907821 -207348762 - L1PA14 LINE L1 -3 6158 6022 2325 101 7 0 chr2 45907826 45908133 -207348450 - AluSp SINE Alu -4 309 1 1729 202 3 0 chr2 45908137 45908434 -207348149 - AluJo SINE Alu -14 298 1 2358 103 0 3 chr2 45908446 45908748 -207347835 - AluSq SINE Alu -12 301 1 2257 110 0 0 chr2 45908835 45909127 -207347456 - AluSc SINE Alu -13 296 5 1131 236 10 55 chr2 45909331 45909384 -207347199 - MLT1L LTR MaLR 0 615 561 2016 122 59 0 chr2 45909384 45909671 -207346912 + AluSx SINE Alu 2 305 -7 1131 236 10 55 chr2 45909671 45909910 -207346673 - MLT1L LTR MaLR -54 561 336 791 254 42 5 chr2 45909914 45910131 -207346452 - MIR SINE MIR -4 258 34 578 270 13 13 chr2 45910235 45910394 -207346189 - MLT1L LTR MaLR -364 251 93 34 55 0 0 chr2 45910649 45910704 -207345879 + AT_rich Low_complexity Low_complexity 1 55 0 21 0 0 0 chr2 45910946 45910967 -207345616 + AT_rich Low_complexity Low_complexity 1 21 0 2449 79 0 0 chr2 45911723 45912014 -207344569 - AluSc SINE Alu -18 291 1 951 280 109 16 chr2 45912233 45912791 -207343792 + L1MC5 LINE L1 7301 7910 -51 396 0 0 0 chr2 45912796 45912840 -207343743 + (CA)n Simple_repeat Simple_repeat 2 45 0 1857 106 34 65 chr2 45913216 45913536 -207343047 + AluSx SINE Alu 1 311 0 381 275 16 47 chr2 45913698 45913891 -207342692 + L2 LINE L2 2138 2324 -990 812 228 123 9 chr2 45914027 45914246 -207342337 - MLT1J LTR MaLR -249 262 19 508 156 104 0 chr2 45914389 45914485 -207342098 + MER53 DNA DNA 1 106 -83 458 314 83 26 chr2 45914519 45914905 -207341678 + L2 LINE L2 2439 2846 -468 887 158 0 0 chr2 45914996 45915129 -207341454 - FLAM_A SINE Alu 0 133 1 236 278 14 0 chr2 45915200 45915272 -207341311 + L2 LINE L2 2964 3036 -236 2374 91 13 0 chr2 45915273 45915571 -207341012 + AluSx SINE Alu 11 312 0 452 344 91 9 chr2 45915586 45915816 -207340767 + L2 LINE L2 3022 3270 -2 22 0 0 0 chr2 45916627 45916649 -207339934 + AT_rich Low_complexity Low_complexity 1 22 0 228 184 0 0 chr2 45917685 45917734 -207338849 + A-rich Low_complexity Low_complexity 2 50 0 466 260 137 25 chr2 45918217 45918421 -207338162 + MIR SINE MIR 23 249 -13 278 288 45 9 chr2 45918495 45918534 -207338049 + MER103 DNA DNA 2 38 -128 2304 88 3 7 chr2 45918534 45918830 -207337753 - AluSc SINE Alu -14 295 1 278 288 45 9 chr2 45918830 45918901 -207337682 + MER103 DNA DNA 38 116 -50 1880 188 0 0 chr2 45919018 45919322 -207337261 + AluJb SINE Alu 1 304 -8 382 239 208 13 chr2 45919456 45919615 -207336968 + MIR SINE MIR 6 195 -67 652 228 99 47 chr2 45920050 45920283 -207336300 - MIR SINE MIR -13 249 5 1152 295 79 18 chr2 45921633 45922026 -207334557 + LTR16A LTR ERVL 16 432 -18 2003 148 0 0 chr2 45922237 45922521 -207334062 + AluSx SINE Alu 1 305 0 190 0 0 0 chr2 45922521 45922542 -207334041 + (TAAA)n Simple_repeat Simple_repeat 2 96 0 2135 92 14 7 chr2 45922543 45922864 -207333719 + AluY SINE Alu 2 286 -25 182 341 80 11 chr2 45923010 45923098 -207333485 + MIR SINE MIR 88 181 -81 200 286 20 20 chr2 45923495 45923544 -207333039 + L2 LINE L2 3127 3175 -97 637 148 52 0 chr2 45923714 45923829 -207332754 - AluSg/x SINE Alu 0 312 192 392 303 139 36 chr2 45924195 45924532 -207332051 + L2 LINE L2 2245 2616 -698 2179 116 0 7 chr2 45924539 45924824 -207331759 - AluSx SINE Alu -27 285 3 234 286 22 55 chr2 45925084 45925175 -207331408 + MER97c DNA MER1_type? 1 88 -1002 219 321 43 43 chr2 45926841 45926981 -207329602 - L2 LINE L2 0 3272 3133 266 188 0 43 chr2 45927967 45928036 -207328547 + GA-rich Low_complexity Low_complexity 2 67 0 2123 122 0 22 chr2 45928100 45928412 -207328171 - AluSx SINE Alu -7 305 1 524 216 41 0 chr2 45928445 45928590 -207327993 - MIR SINE MIR -63 145 35 200 0 95 48 chr2 45928620 45928662 -207327921 + (TTAG)n Simple_repeat Simple_repeat 1 44 0 286 279 52 21 chr2 45928662 45928820 -207327763 + LTR33A LTR ERVL 1 153 -370 809 227 123 19 chr2 45928850 45929110 -207327473 + LTR33 LTR ERVL 235 521 0 210 128 0 0 chr2 45929234 45929273 -207327310 + (TC)n Simple_repeat Simple_repeat 1 39 0 360 0 0 0 chr2 45929273 45929313 -207327270 + (TG)n Simple_repeat Simple_repeat 1 40 0 416 262 108 58 chr2 45930384 45930596 -207325987 + MIR SINE MIR 16 248 -14 834 259 68 15 chr2 45930679 45930942 -207325641 - MLT1L LTR MaLR -2 613 337 243 43 21 43 chr2 45930958 45931005 -207325578 + (TTTCC)n Simple_repeat Simple_repeat 4 49 0 2213 112 10 0 chr2 45931007 45931310 -207325273 - AluSp SINE Alu -3 310 5 246 265 142 49 chr2 45931315 45931477 -207325106 - MLT1L LTR MaLR -304 311 135 1524 206 72 51 chr2 45931518 45931949 -207324634 + MSTB2 LTR MaLR 18 457 0 975 157 30 102 chr2 45932959 45933194 -207323389 + MER20 DNA MER1_type 2 219 0 21 0 0 0 chr2 45933596 45933617 -207322966 + AT_rich Low_complexity Low_complexity 1 21 0 785 243 171 22 chr2 45933865 45934269 -207322314 - HAL1 LINE L1 -19 2488 2025 1884 167 17 3 chr2 45934324 45934624 -207321959 + AluJb SINE Alu 1 304 -8 1851 170 0 0 chr2 45934831 45935120 -207321463 + AluJb SINE Alu 2 290 -22 2285 104 7 0 chr2 45936921 45937220 -207319363 - AluSx SINE Alu -11 301 1 234 320 203 27 chr2 45937440 45937572 -207319011 + L2 LINE L2 2239 2347 -967 2433 94 3 0 chr2 45937572 45937880 -207318703 - AluSx SINE Alu -3 309 1 234 320 203 27 chr2 45937880 45938294 -207318289 + L2 LINE L2 2347 2881 -433 270 346 124 10 chr2 45938353 45938555 -207318028 + L2 LINE L2 2970 3194 -78 347 240 31 0 chr2 45938690 45938786 -207317797 + MIR SINE MIR 148 246 -16 405 296 30 8 chr2 45939161 45939293 -207317290 - MER5B DNA MER1_type -40 138 4 2084 123 7 0 chr2 45940210 45940510 -207316073 + AluSg1 SINE Alu 1 302 -7 1733 179 37 7 chr2 45940519 45940815 -207315768 + AluJb SINE Alu 1 305 -7 2084 118 14 0 chr2 45942511 45942800 -207313783 + AluSx SINE Alu 1 293 -19 303 49 0 0 chr2 45942810 45942851 -207313732 + (GA)n Simple_repeat Simple_repeat 2 42 0 635 115 0 0 chr2 45942853 45942940 -207313643 - AluJ/FLAM SINE Alu -224 88 2 518 314 60 12 chr2 45942941 45943189 -207313394 - MIR SINE MIR -1 261 2 183 265 0 0 chr2 45943346 45943395 -207313188 - L3 LINE CR1 -1 1576 1528 2362 72 10 20 chr2 45943737 45944041 -207312542 - AluSq SINE Alu -12 301 1 3636 96 36 29 chr2 45944233 45944627 -207311956 - MER41A LTR ERV1 0 554 153 2059 102 14 7 chr2 45944627 45944922 -207311661 - AluSq SINE Alu -16 297 1 3636 96 36 29 chr2 45944922 45945077 -207311506 - MER41A LTR ERV1 -401 153 1 298 268 12 0 chr2 45945106 45945188 -207311395 - L2 LINE L2 -5 3267 3185 2078 102 7 11 chr2 45945195 45945509 -207311074 + AluSq SINE Alu 1 313 0 404 281 29 19 chr2 45946292 45946451 -207310132 - MLT1J1 LTR MaLR -250 261 61 1735 179 17 25 chr2 45947103 45947461 -207309122 + MSTB LTR MaLR 2 356 -70 2215 98 6 25 chr2 45947878 45948196 -207308387 - AluSp SINE Alu -1 312 1 215 291 70 47 chr2 45948295 45948381 -207308202 + L2 LINE L2 2684 2771 -543 212 279 73 0 chr2 45948465 45948533 -207308050 + MER5A DNA MER1_type 1 73 -116 1732 174 3 3 chr2 45948534 45948822 -207307761 + AluJb SINE Alu 1 288 -24 297 289 0 53 chr2 45948837 45948951 -207307632 + MER5A DNA MER1_type 60 167 -22 245 220 102 0 chr2 45949019 45949078 -207307505 + LTR48B LTR ERV1 1 65 -579 1424 186 100 69 chr2 45949080 45949537 -207307046 + MER39 LTR ERV1 232 644 0 2481 74 0 3 chr2 45949645 45949942 -207306641 + AluSp SINE Alu 1 296 -17 400 265 26 17 chr2 45950425 45950542 -207306041 + MIR SINE MIR 16 133 -75 1383 274 107 28 chr2 45950901 45951111 -207305472 + MLT1J LTR MaLR 8 200 -311 2133 103 4 0 chr2 45951111 45951438 -207305145 - AluSx SINE Alu 0 328 1 1383 274 107 28 chr2 45951438 45951686 -207304897 + MLT1J LTR MaLR 200 503 -8 614 143 0 0 chr2 45951726 45951817 -207304766 - AluJ/FLAM SINE Alu -219 93 3 2373 42 42 3 chr2 45952036 45952320 -207304263 - AluY SINE Alu -16 295 1 624 231 65 77 chr2 45952447 45952542 -207304041 + MIR SINE MIR 6 101 -161 2136 114 10 0 chr2 45952542 45952841 -207303742 + AluSx SINE Alu 1 302 -10 624 231 65 77 chr2 45952841 45952992 -207303591 + MIR SINE MIR 101 249 -13 22 56 0 0 chr2 45953341 45953377 -207303206 + AT_rich Low_complexity Low_complexity 1 36 0 387 0 0 0 chr2 45953436 45953479 -207303104 + (TG)n Simple_repeat Simple_repeat 1 43 0 752 194 0 0 chr2 45953552 45953676 -207302907 + FLAM_C SINE Alu 2 125 -18 277 222 69 0 chr2 45954088 45954160 -207302423 + MLT1J2 LTR MaLR 74 150 -300 * 298 169 13 104 chr2 45954150 45954227 -207302356 + AluJ/FRAM SINE Alu 224 293 -9 728 220 32 32 chr2 45954379 45954565 -207302018 - MIR SINE MIR -46 216 31 322 221 0 26 chr2 45954815 45954892 -207301691 - L2 LINE L2 -4 3309 3235 6093 177 30 62 chr2 45955022 45955083 -207301500 - Charlie1a DNA MER1_type -1416 1345 1284 2094 133 0 0 chr2 45955083 45955369 -207301214 + AluSx SINE Alu 1 286 -26 180 0 0 0 chr2 45955377 45955397 -207301186 + (TAAAA)n Simple_repeat Simple_repeat 3 22 0 6093 177 30 62 chr2 45955397 45955800 -207300783 - Charlie1a DNA MER1_type -1484 1277 863 2163 137 0 0 chr2 45955800 45956100 -207300483 + AluSx SINE Alu 1 300 -12 6093 177 30 62 chr2 45956100 45956712 -207299871 - Charlie1a DNA MER1_type -1898 863 310 2274 109 0 0 chr2 45956712 45957016 -207299567 - AluSx SINE Alu -8 304 1 6093 177 30 62 chr2 45957016 45957314 -207299269 - Charlie1a DNA MER1_type -2451 310 4 1462 102 10 0 chr2 45957526 45957722 -207298861 + AluSx SINE Alu 1 198 -114 4333 179 21 21 chr2 45957827 45958136 -207298447 + L1MB8 LINE L1 5301 5608 -570 2061 139 10 0 chr2 45958136 45958430 -207298153 + AluSx SINE Alu 1 297 -15 4333 179 21 21 chr2 45958430 45958997 -207297586 + L1MB8 LINE L1 5608 6176 -2 2278 113 0 3 chr2 45959048 45959350 -207297233 - AluSg SINE Alu -9 301 1 227 319 0 0 chr2 45959724 45959793 -207296790 - MIR SINE MIR -10 252 184 2253 116 3 0 chr2 45959866 45960167 -207296416 + AluSx SINE Alu 1 302 -10 375 333 101 0 chr2 45960442 45960661 -207295922 - MIR SINE MIR -14 248 8 23 33 0 0 chr2 45960695 45960725 -207295858 + AT_rich Low_complexity Low_complexity 1 30 0 1009 170 26 70 chr2 45960748 45960907 -207295676 + L1MD3 LINE L1 7737 7881 -114 1769 163 14 27 chr2 45960907 45961202 -207295381 + AluJb SINE Alu 1 291 -21 1009 170 26 70 chr2 45961202 45961313 -207295270 + L1MD3 LINE L1 7881 7995 0 3519 164 55 26 chr2 45961556 45962253 -207294330 + L1MC3 LINE L1 6933 7649 -136 677 260 153 31 chr2 45962308 45962635 -207293948 - MLT1G1 LTR MaLR -175 420 16 848 184 46 0 chr2 45962636 45962788 -207293795 - FRAM SINE Alu -17 159 1 1694 158 9 38 chr2 45962815 45963132 -207293451 + AluJo SINE Alu 1 308 -4 2147 110 27 3 chr2 45963132 45963431 -207293152 + AluSx SINE Alu 1 306 -6 617 274 136 51 chr2 45963431 45963587 -207292996 + HAL1 LINE L1 440 581 -1926 2520 58 0 0 chr2 45963587 45963882 -207292701 - AluY SINE Alu -16 295 1 617 274 136 51 chr2 45963882 45964272 -207292311 + HAL1 LINE L1 581 936 -1571 258 32 0 0 chr2 45964272 45964303 -207292280 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1287 194 35 76 chr2 45964307 45964446 -207292137 + AluJo SINE Alu 1 144 -168 2295 106 3 6 chr2 45964446 45964757 -207291826 + AluSx SINE Alu 2 311 -1 1287 194 35 76 chr2 45964757 45964932 -207291651 + AluJo SINE Alu 144 302 -10 617 274 136 51 chr2 45964932 45964967 -207291616 + HAL1 LINE L1 938 1077 -1430 * 4357 138 17 8 chr2 45964963 45965783 -207290800 + L1MA7 LINE L1 5354 6286 -5 2136 104 7 0 chr2 45965808 45966087 -207290496 + AluSx SINE Alu 1 281 -31 417 20 0 0 chr2 45966087 45966137 -207290446 + (CAATA)n Simple_repeat Simple_repeat 1 50 0 192 40 0 0 chr2 45966138 45966163 -207290420 + (CATAA)n Simple_repeat Simple_repeat 1 25 0 374 236 8 79 chr2 45966437 45966564 -207290019 + HAL1 LINE L1 1404 1521 -986 2251 107 0 7 chr2 45966810 45967120 -207289463 + AluSg SINE Alu 1 308 -2 2124 116 10 13 chr2 45967865 45968168 -207288415 + AluSx SINE Alu 1 302 -10 242 242 24 147 chr2 45968336 45968547 -207288036 + HAL1 LINE L1 4 188 -2319 2123 109 33 3 chr2 45968559 45968863 -207287720 + AluSq SINE Alu 1 313 0 1444 170 0 13 chr2 45969152 45969382 -207287201 + AluJb SINE Alu 1 227 -85 253 106 43 0 chr2 45969418 45969465 -207287118 + MSTB1 LTR MaLR 198 246 -186 186 146 36 18 chr2 45969486 45969541 -207287042 + GA-rich Low_complexity Low_complexity 1 56 0 * 645 92 0 0 chr2 45969528 45969626 -207286957 + (GGAA)n Simple_repeat Simple_repeat 1 98 0 1585 206 4 4 chr2 45969630 45969911 -207286672 + AluJb SINE Alu 3 283 -29 2328 79 0 3 chr2 45970274 45970565 -207286018 + AluY SINE Alu 1 290 -21 353 291 112 50 chr2 45970582 45970823 -207285760 + HAL1 LINE L1 1198 1453 -1054 * 3035 129 45 99 chr2 45970814 45971451 -207285132 + L1MB2 LINE L1 5565 6167 -4 284 208 26 0 chr2 45971570 45971647 -207284936 + HAL1 LINE L1 2261 2339 -168 1826 160 0 20 chr2 45971649 45971949 -207284634 + AluJo SINE Alu 1 294 -18 483 202 116 0 chr2 45973096 45973225 -207283358 + L1ME3A LINE L1 5829 5972 -198 1190 206 138 16 chr2 45973233 45973611 -207282972 - Charlie4a DNA MER1_type -84 424 1 1203 282 62 16 chr2 45973638 45974089 -207282494 - L2 LINE L2 -924 2390 1919 769 231 32 56 chr2 45974107 45974286 -207282297 - MIR SINE MIR -23 239 64 2425 76 0 0 chr2 45974286 45974588 -207281995 + AluY SINE Alu 1 302 -9 769 231 32 56 chr2 45974588 45974624 -207281959 - MIR SINE MIR -198 64 29 2339 101 0 9 chr2 45975763 45976079 -207280504 + AluSp SINE Alu 1 313 0 1601 187 24 14 chr2 45977075 45977369 -207279214 + AluJo SINE Alu 1 297 -15 1039 172 0 0 chr2 45977546 45977709 -207278874 + FRAM SINE Alu 1 160 -16 2500 80 0 0 chr2 45978295 45978597 -207277986 - AluSq SINE Alu -11 302 1 1026 198 101 30 chr2 45978880 45978997 -207277586 + MER33 DNA MER1_type 5 112 -2473 2140 150 48 25 chr2 45978997 45979351 -207277232 - THE1B LTR MaLR -2 362 1 1026 198 101 30 chr2 45979351 45979531 -207277052 + MER33 DNA MER1_type 112 323 -1 397 259 125 83 chr2 45979535 45979554 -207277029 + L1ME LINE L1 5511 5528 -642 2185 102 3 10 chr2 45979554 45979848 -207276735 + AluSq SINE Alu 1 292 -21 258 32 0 0 chr2 45979848 45979879 -207276704 + (TA)n Simple_repeat Simple_repeat 1 31 0 397 259 125 83 chr2 45979879 45980112 -207276471 + L1ME LINE L1 5528 5780 -390 1796 157 7 13 chr2 45980112 45980411 -207276172 + AluJb SINE Alu 9 305 -7 397 259 125 83 chr2 45980411 45980445 -207276138 + L1ME LINE L1 5780 5811 -359 2312 84 10 3 chr2 45980606 45980904 -207275679 + AluSq SINE Alu 1 300 -13 1976 83 8 0 chr2 45981243 45981497 -207275086 + AluSx SINE Alu 1 256 -56 2342 101 0 0 chr2 45982239 45982537 -207274046 + AluSg SINE Alu 1 298 -12 211 243 135 40 chr2 45982805 45982879 -207273704 + L2 LINE L2 3216 3296 -17 1987 127 14 3 chr2 45983058 45983350 -207273233 - AluSx SINE Alu -17 295 1 1995 140 3 3 chr2 45984370 45984662 -207271921 - AluSx SINE Alu -20 292 1 203 184 0 0 chr2 45984900 45984938 -207271645 + A-rich Low_complexity Low_complexity 1 38 0 817 160 76 7 chr2 45985144 45985288 -207271295 - AluSq SINE Alu -158 155 2 1400 168 84 8 chr2 45985415 45985677 -207270906 - AluJo SINE Alu -30 282 1 2328 115 0 0 chr2 45986469 45986774 -207269809 - AluSx SINE Alu -7 305 1 2527 137 19 41 chr2 45989358 45989592 -207266991 + HERVH LTR ERV1 2 223 -7490 2386 80 0 7 chr2 45989592 45989891 -207266692 - AluSg SINE Alu -13 297 1 2527 137 19 41 chr2 45989891 45990124 -207266459 + HERVH LTR ERV1 223 459 -7254 6592 139 9 33 chr2 45990184 45991320 -207265263 + HERVH LTR ERV1 801 1909 -5804 301 214 20 31 chr2 45991890 45991988 -207264595 + (CCG)n Simple_repeat Simple_repeat 2 98 0 310 286 13 13 chr2 45993412 45993489 -207263094 - L2 LINE L2 -18 3254 3178 180 0 0 0 chr2 45993744 45993764 -207262819 + (TA)n Simple_repeat Simple_repeat 2 21 0 290 79 0 0 chr2 45994815 45994853 -207261730 - THE1-int LTR MaLR -125 1455 1418 22 35 0 0 chr2 45994854 45994883 -207261700 + GC_rich Low_complexity Low_complexity 1 29 0 484 278 37 58 chr2 45995027 45995176 -207261407 + MER5A DNA MER1_type 3 149 -40 2487 76 0 0 chr2 45995176 45995477 -207261106 - AluSx SINE Alu -11 301 1 484 278 37 58 chr2 45995477 45995518 -207261065 + MER5A DNA MER1_type 149 189 0 350 217 58 10 chr2 45996114 45996229 -207260354 + MIR SINE MIR 39 154 -63 928 201 112 12 chr2 45996451 45996553 -207260030 + Charlie4a DNA MER1_type 222 312 -1649 2249 99 7 0 chr2 45996553 45996845 -207259738 + AluSg SINE Alu 1 294 -16 928 201 112 12 chr2 45996845 45996991 -207259592 + Charlie4a DNA MER1_type 312 495 -13 2403 75 0 0 chr2 45997732 45998027 -207258556 + AluY SINE Alu 1 295 -16 2449 72 0 7 chr2 45998206 45998510 -207258073 + AluSq SINE Alu 5 306 -7 183 330 119 0 chr2 45999103 45999221 -207257362 + L2 LINE L2 2131 2262 -1052 1903 130 16 29 chr2 45999368 45999684 -207256899 - AluSx SINE Alu 0 312 1 2347 94 0 0 chr2 45999705 46000003 -207256580 - AluY SINE Alu -13 298 1 574 264 98 12 chr2 46000225 46000388 -207256195 + MER5B DNA MER1_type 1 177 -1 234 62 0 0 chr2 46000456 46000488 -207256095 + (T)n Simple_repeat Simple_repeat 1 32 0 270 0 0 0 chr2 46000670 46000700 -207255883 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 207 0 0 0 chr2 46000699 46000722 -207255861 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 * 30 69 0 0 chr2 46001746 46001804 -207254779 + AT_rich Low_complexity Low_complexity 1 58 0 378 278 74 0 chr2 46002351 46002459 -207254124 + L2 LINE L2 3190 3305 -8 289 253 152 10 chr2 46002777 46002876 -207253707 - MIR SINE MIR -115 147 35 1756 175 0 3 chr2 46003024 46003309 -207253274 - AluJb SINE Alu -28 284 1 2458 76 0 22 chr2 46003705 46004022 -207252561 + AluY SINE Alu 1 310 -1 2584 62 0 0 chr2 46004351 46004656 -207251927 + AluY SINE Alu 1 305 -6 21 0 0 0 chr2 46004716 46004737 -207251846 + AT_rich Low_complexity Low_complexity 1 21 0 523 308 17 6 chr2 46005192 46005364 -207251219 + MIR SINE MIR 45 218 -44 886 117 17 0 chr2 46005924 46006044 -207250539 + AluSg/x SINE Alu 159 280 -30 1656 173 20 3 chr2 46006056 46006356 -207250227 + L1MB3 LINE L1 5816 6120 -63 1156 153 3 143 chr2 46006470 46006757 -207249826 + AluJb SINE Alu 50 296 -16 2073 114 7 7 chr2 46007048 46007345 -207249238 - AluSq SINE Alu -11 302 6 2968 107 9 36 chr2 46007347 46007796 -207248787 + LTR9 LTR ERV1 87 523 -89 1823 125 35 3 chr2 46007796 46008084 -207248499 + AluSx SINE Alu 1 297 -15 835 210 15 20 chr2 46008104 46008299 -207248284 - L1ME LINE L1 -418 5748 5555 2248 123 69 47 chr2 46008300 46008905 -207247678 + MER51A LTR ERV1 1 547 -87 565 48 58 136 chr2 46009549 46009652 -207246931 + MER51A LTR ERV1 540 634 0 991 221 10 0 chr2 46009652 46009860 -207246723 - L1ME LINE L1 -609 5557 5348 579 208 53 111 chr2 46009861 46010165 -207246418 - MLT1G1 LTR MaLR -222 373 40 639 123 61 0 chr2 46010203 46010317 -207246266 - L1MB2 LINE L1 -3 6168 6048 1871 171 0 10 chr2 46010683 46010987 -207245596 - AluJb SINE Alu -11 301 1 344 248 24 72 chr2 46010988 46011113 -207245470 - L1MC4 LINE L1 -12 8030 7912 236 333 0 0 chr2 46011126 46011195 -207245388 + CT-rich Low_complexity Low_complexity 1 69 0 2290 206 127 70 chr2 46011207 46011323 -207245260 - L1MC4 LINE L1 -143 7899 7791 2100 134 0 0 chr2 46011323 46011615 -207244968 + AluSg SINE Alu 1 292 -18 2290 206 127 70 chr2 46011615 46012210 -207244373 - L1MC4 LINE L1 -251 7791 7132 2283 98 3 3 chr2 46012210 46012515 -207244068 - AluSp SINE Alu -6 307 3 2290 206 127 70 chr2 46012515 46012630 -207243953 - L1MC4 LINE L1 -910 7132 7025 372 254 39 0 chr2 46012685 46012786 -207243797 - L1MC4 LINE L1 -1240 6576 6439 343 255 224 12 chr2 46013017 46013178 -207243405 - L1MEc LINE L1 -4116 2280 2086 2375 82 0 10 chr2 46013196 46013501 -207243082 + AluY SINE Alu 1 302 -9 302 279 111 29 chr2 46013639 46013811 -207242772 - L1ME LINE L1 -945 5201 5016 288 264 42 110 chr2 46014447 46014552 -207242031 + MIR SINE MIR 62 173 -89 2201 88 35 0 chr2 46014552 46014836 -207241747 - AluY SINE Alu -17 294 1 288 264 42 110 chr2 46014836 46014866 -207241717 + MIR SINE MIR 173 203 -59 1220 204 136 87 chr2 46014866 46015328 -207241255 - MER31A LTR ERV1 0 485 1 288 264 42 110 chr2 46015328 46015393 -207241190 + MIR SINE MIR 203 248 -14 234 245 0 0 chr2 46015618 46015667 -207240916 - MER117 DNA MER1_type -134 63 15 1505 175 69 7 chr2 46015667 46015941 -207240642 + AluJo SINE Alu 8 298 -14 530 278 249 12 chr2 46016320 46016709 -207239874 - L2 LINE L2 -256 3057 2572 878 183 43 6 chr2 46016717 46016881 -207239702 + MER20 DNA MER1_type 49 218 -1 207 274 46 137 chr2 46017026 46017113 -207239470 - L2 LINE L2 -194 3078 3013 1997 93 85 0 chr2 46017113 46017383 -207239200 + AluSg SINE Alu 1 293 -17 207 274 46 137 chr2 46017383 46017470 -207239113 - L2 LINE L2 -259 3013 2920 873 84 0 0 chr2 46017585 46017692 -207238891 + AluSp SINE Alu 1 107 -206 567 238 54 7 chr2 46017792 46017939 -207238644 - L1ME LINE L1 -594 5570 5417 638 283 113 45 chr2 46018035 46018478 -207238105 + MLT1J2 LTR MaLR 1 446 -4 265 163 0 0 chr2 46018664 46018713 -207237870 - L1ME3A LINE L1 0 6170 6122 212 175 0 0 chr2 46018997 46019037 -207237546 + T-rich Low_complexity Low_complexity 1 40 0 284 279 8 124 chr2 46019119 46019248 -207237335 - MER91B DNA MER1_type 0 190 77 225 329 66 0 chr2 46019256 46019332 -207237251 - MER91B DNA MER1_type -59 131 51 23 0 0 0 chr2 46019434 46019457 -207237126 + AT_rich Low_complexity Low_complexity 1 23 0 437 259 306 52 chr2 46019695 46020271 -207236312 + L3 LINE CR1 435 1156 -421 1507 220 92 41 chr2 46020370 46020913 -207235670 - LTR24B LTR ERV1 0 635 1 288 176 129 47 chr2 46021454 46021539 -207235044 - L1MC4 LINE L1 -1337 6705 6614 343 295 90 39 chr2 46022270 46022703 -207233880 + L1ME LINE L1 4382 4846 -1300 227 207 49 49 chr2 46022976 46023058 -207233525 + L1ME2 LINE L1 6080 6161 -3 236 317 37 12 chr2 46023747 46023829 -207232754 + L1ME LINE L1 5497 5580 -541 433 165 76 82 chr2 46024088 46024206 -207232377 - HsTC2 DNA Tc2 1 1899 1781 2539 63 0 0 chr2 46024206 46024506 -207232077 + AluY SINE Alu 1 300 -11 433 165 76 82 chr2 46024506 46024545 -207232038 - HsTC2 DNA Tc2 -117 1781 1743 255 105 0 0 chr2 46024588 46024626 -207231957 - HsTC2 DNA Tc2 -1628 270 233 1998 147 3 0 chr2 46024621 46024913 -207231670 - AluSx SINE Alu -19 293 1 1010 111 7 0 chr2 46024913 46025048 -207231535 - AluSq/x SINE Alu -177 136 1 502 182 30 0 chr2 46025048 46025147 -207231436 - L1MB2 LINE L1 -345 5826 5725 24 53 0 0 chr2 46025147 46025185 -207231398 + AT_rich Low_complexity Low_complexity 1 38 0 2262 107 0 0 chr2 46025185 46025485 -207231098 - AluSx SINE Alu 0 312 13 2207 99 3 3 chr2 46025501 46025794 -207230789 - AluSx SINE Alu -14 298 6 23 0 0 0 chr2 46026970 46026993 -207229590 + AT_rich Low_complexity Low_complexity 1 23 0 739 148 7 30 chr2 46027151 46027286 -207229297 + FLAM_A SINE Alu 2 133 0 2151 130 3 3 chr2 46027668 46027975 -207228608 - AluSp SINE Alu -6 307 1 2271 66 3 14 chr2 46028730 46029061 -207227522 + AluY SINE Alu 1 328 0 2182 122 0 3 chr2 46029572 46029866 -207226717 - AluSx SINE Alu -19 293 1 781 140 96 6 chr2 46030125 46030282 -207226301 - MER33 DNA MER1_type 0 324 154 780 165 39 0 chr2 46030301 46030428 -207226155 - AluJb SINE Alu -179 133 2 712 181 14 7 chr2 46030429 46030567 -207226016 - MER33 DNA MER1_type -159 165 27 231 333 53 18 chr2 46030584 46030698 -207225885 + L2 LINE L2 3195 3312 -1 1969 169 3 0 chr2 46030802 46031104 -207225479 - AluSx SINE Alu -9 303 1 340 195 16 24 chr2 46031572 46031695 -207224888 + CT-rich Low_complexity Low_complexity 1 122 0 201 111 0 0 chr2 46031695 46031722 -207224861 + (TCCCC)n Simple_repeat Simple_repeat 1 27 0 950 145 6 24 chr2 46031726 46031892 -207224691 - AluJb SINE Alu -13 299 137 2052 134 10 0 chr2 46032446 46032738 -207223845 - AluSq SINE Alu -18 295 1 713 197 62 22 chr2 46033098 46033194 -207223389 + MER53 DNA DNA 1 92 -97 1765 142 3 76 chr2 46033194 46033524 -207223059 - AluJb SINE Alu -6 306 1 713 197 62 22 chr2 46033524 46033605 -207222978 + MER53 DNA DNA 92 185 -4 536 297 169 5 chr2 46033946 46034165 -207222418 - MIR SINE MIR -5 257 3 930 291 77 56 chr2 46034384 46034649 -207221934 - L1ME3A LINE L1 -219 5951 5693 2163 122 7 0 chr2 46034649 46034944 -207221639 - AluSg SINE Alu -13 297 1 930 291 77 56 chr2 46034944 46035143 -207221440 - L1ME3A LINE L1 -477 5693 5500 1653 181 3 10 chr2 46035143 46035431 -207221152 - AluJo SINE Alu -26 286 1 930 291 77 56 chr2 46035431 46035678 -207220905 - L1ME3A LINE L1 -670 5500 5256 471 245 151 13 chr2 46035726 46035885 -207220698 - Charlie8 DNA MER1_type -2149 268 88 370 166 52 55 chr2 46037078 46037426 -207219157 + (CTGTG)n Simple_repeat Simple_repeat 1 347 0 320 348 18 0 chr2 46037496 46037608 -207218975 + MIR SINE MIR 99 212 -50 381 235 0 0 chr2 46037612 46037693 -207218890 - L2 LINE L2 -4 3309 3229 550 280 89 48 chr2 46037824 46038086 -207218497 - L2 LINE L2 -151 3162 2883 651 157 235 0 chr2 46038086 46038239 -207218344 + MER53 DNA DNA 1 189 0 550 280 89 48 chr2 46038239 46038290 -207218293 - L2 LINE L2 -430 2883 2836 1226 147 6 122 chr2 46038549 46038671 -207217912 - L1MB7 LINE L1 -1 6183 6049 2218 109 14 0 chr2 46038671 46038964 -207217619 - AluSx SINE Alu -15 297 1 1226 147 6 122 chr2 46038964 46039161 -207217422 - L1MB7 LINE L1 -135 6049 5901 4352 174 32 31 chr2 46039184 46039456 -207217127 - L1MB7 LINE L1 -569 5609 5339 2066 147 0 6 chr2 46039456 46039770 -207216813 - AluJb SINE Alu 0 312 1 4352 174 32 31 chr2 46039770 46039834 -207216749 - L1MB7 LINE L1 -839 5339 5277 2351 122 0 0 chr2 46039834 46040146 -207216437 - AluSx SINE Alu 0 312 1 4352 174 32 31 chr2 46040146 46040265 -207216318 - L1MB7 LINE L1 -901 5277 5160 2261 103 3 3 chr2 46040265 46040566 -207216017 - AluSq SINE Alu -12 301 1 4352 174 32 31 chr2 46040566 46041323 -207215260 - L1MB7 LINE L1 -1018 5160 4389 400 250 154 11 chr2 46041587 46041775 -207214808 - MIR SINE MIR -44 218 4 320 286 133 0 chr2 46042682 46042787 -207213796 - MIR3 SINE MIR -54 154 36 27 0 0 0 chr2 46043509 46043536 -207213047 + AT_rich Low_complexity Low_complexity 1 27 0 334 282 96 48 chr2 46043547 46043872 -207212711 - L2 LINE L2 -619 2695 2280 2180 111 0 20 chr2 46043872 46044169 -207212414 + AluSg SINE Alu 1 291 -19 334 282 96 48 chr2 46044169 46044250 -207212333 - L2 LINE L2 -1034 2280 2204 538 287 19 0 chr2 46044432 46044589 -207211994 + MIR SINE MIR 57 216 -46 276 275 53 53 chr2 46044666 46044855 -207211728 - L2 LINE L2 -1193 2121 1933 406 267 0 35 chr2 46044860 46045032 -207211551 + AluSx SINE Alu 3 168 -144 1289 105 12 0 chr2 46045371 46045542 -207211041 + AluSg/x SINE Alu 128 300 -12 220 350 33 0 chr2 46045603 46045723 -207210860 - MIR SINE MIR -119 143 20 920 150 0 0 chr2 46045932 46046065 -207210518 - FLAM_C SINE Alu -10 133 1 397 251 27 91 chr2 46046921 46047108 -207209475 - MER69A DNA AcHobo -2 175 1 313 286 27 45 chr2 46047336 46047448 -207209135 + L2 LINE L2 3163 3272 0 2142 139 58 6 chr2 46047749 46048095 -207208488 + THE1B LTR MaLR 1 364 0 1044 165 12 0 chr2 46048755 46048919 -207207664 - AluJo SINE Alu -146 166 1 1244 145 38 4 chr2 46048924 46049180 -207207403 - L1MD1 LINE L1 -374 5868 5575 352 282 134 23 chr2 46049181 46049397 -207207186 + L2 LINE L2 2664 2903 -411 2003 148 3 0 chr2 46049406 46049697 -207206886 - AluSx SINE Alu -18 294 3 2416 91 0 7 chr2 46050053 46050360 -207206223 - AluSq SINE Alu -8 305 1 1685 186 31 17 chr2 46052387 46052678 -207203905 - AluSx SINE Alu -16 296 2 3265 53 0 0 chr2 46052727 46053124 -207203459 - L1PA6 LINE L1 -4 6150 5754 235 226 19 0 chr2 46053983 46054036 -207202547 - AluJ/FRAM SINE Alu -20 282 229 2162 110 3 10 chr2 46054185 46054486 -207202097 - AluSg SINE Alu -11 299 1 181 159 114 0 chr2 46054591 46054635 -207201948 + L2 LINE L2 3000 3048 -224 4803 176 118 25 chr2 46055261 46055308 -207201275 - L1MB7 LINE L1 -1 6419 6378 2337 92 7 10 chr2 46055308 46055614 -207200969 - AluSq SINE Alu -8 305 1 4803 176 118 25 chr2 46055614 46056751 -207199832 - L1MB7 LINE L1 -42 6378 4992 789 180 36 42 chr2 46056751 46056918 -207199665 + FRAM SINE Alu 1 166 0 4803 176 118 25 chr2 46056918 46057484 -207199099 - L1MB7 LINE L1 -1428 4992 4480 2324 100 0 7 chr2 46057490 46057789 -207198794 - AluY SINE Alu -14 297 1 3267 169 53 38 chr2 46057813 46058356 -207198227 - L1MB4 LINE L1 -6 6174 5641 1977 145 10 0 chr2 46058356 46058652 -207197931 - AluSx SINE Alu -11 301 3 1888 153 7 20 chr2 46058654 46058949 -207197634 - AluJb SINE Alu -21 291 1 3267 169 53 38 chr2 46058949 46059142 -207197441 - L1MB4 LINE L1 -539 5641 5424 2664 237 91 18 chr2 46059131 46059562 -207197021 - L1MB7 LINE L1 -4725 1659 1261 * 1772 166 17 3 chr2 46059562 46059851 -207196732 - AluJo SINE Alu -19 293 1 2664 237 91 18 chr2 46059851 46060300 -207196283 - L1MB7 LINE L1 -5123 1261 715 253 284 174 0 chr2 46060546 46060655 -207195928 + MIR SINE MIR 52 179 -83 23 0 0 0 chr2 46061770 46061793 -207194790 + AT_rich Low_complexity Low_complexity 1 23 0 2161 105 0 36 chr2 46063679 46063984 -207192599 - AluSq SINE Alu -4 309 16 1983 204 33 93 chr2 46064084 46064100 -207192483 + L1ME2 LINE L1 5579 5594 -570 4131 68 9 2 chr2 46064100 46064644 -207191939 - L1PA6 LINE L1 0 6154 5607 1983 204 33 93 chr2 46064644 46064727 -207191856 + L1ME2 LINE L1 5594 5680 -484 1844 177 0 3 chr2 46064727 46065015 -207191568 + AluJb SINE Alu 2 288 -24 2282 99 6 13 chr2 46065022 46065335 -207191248 + AluSx SINE Alu 1 311 -1 1983 204 33 93 chr2 46065335 46065839 -207190744 + L1ME2 LINE L1 5686 6154 -10 875 287 43 43 chr2 46066014 46066367 -207190216 + L1MEc LINE L1 52 407 -5989 1980 117 65 7 chr2 46066367 46066658 -207189925 - AluSq SINE Alu -5 308 1 875 287 43 43 chr2 46066658 46066719 -207189864 + L1MEc LINE L1 406 466 -5930 290 218 0 0 chr2 46066731 46066786 -207189797 + Tigger1 DNA MER2_type 1 55 -2363 4013 124 15 15 chr2 46066794 46067406 -207189177 + Tigger1 DNA MER2_type 1807 2418 0 2429 268 67 36 chr2 46067411 46067600 -207188983 + L1MEc LINE L1 484 666 -5730 2597 74 0 0 chr2 46067600 46067910 -207188673 - AluSx SINE Alu -1 311 2 2429 268 67 36 chr2 46067910 46068882 -207187701 + L1MEc LINE L1 666 1681 -4715 2392 102 0 3 chr2 46068930 46069234 -207187349 + AluSg SINE Alu 1 303 -7 1162 250 62 54 chr2 46069249 46069642 -207186941 + L1MEc LINE L1 1886 2286 -4110 948 201 12 0 chr2 46069642 46069811 -207186772 + FAM SINE Alu 2 172 -3 1162 250 62 54 chr2 46069811 46069969 -207186614 + L1MEc LINE L1 2286 2441 -3955 * 2934 199 33 25 chr2 46069962 46070068 -207186515 + L1MB5 LINE L1 4695 4799 -1375 2286 96 7 0 chr2 46070068 46070369 -207186214 + AluSg SINE Alu 1 303 -7 2934 199 33 25 chr2 46070369 46071074 -207185509 + L1MB5 LINE L1 4799 5550 -624 2429 149 43 19 chr2 46071074 46071298 -207185285 - MSTB1 LTR MaLR 0 432 192 1971 119 13 50 chr2 46071298 46071616 -207184967 - AluJo SINE Alu -6 306 1 2429 149 43 19 chr2 46071616 46071813 -207184770 - MSTB1 LTR MaLR -240 192 1 2934 199 33 25 chr2 46071813 46072389 -207184194 + L1MB5 LINE L1 5550 6120 -54 1817 231 10 31 chr2 46072417 46072527 -207184056 + L1MEc LINE L1 2384 2495 -3720 2227 116 0 3 chr2 46072527 46072828 -207183755 + AluSx SINE Alu 1 300 -12 1817 231 10 31 chr2 46072828 46073024 -207183559 + L1MEc LINE L1 2495 2679 -3536 1919 123 50 0 chr2 46073024 46073301 -207183282 + AluSg SINE Alu 1 291 -19 1817 231 10 31 chr2 46073301 46073474 -207183109 + L1MEc LINE L1 2679 2854 -3361 516 212 53 9 chr2 46073474 46073587 -207182996 + MSTB1 LTR MaLR 83 200 -232 2229 111 0 7 chr2 46073587 46073885 -207182698 + AluSx SINE Alu 1 296 -16 2177 110 3 13 chr2 46073886 46074194 -207182389 + AluSg SINE Alu 1 305 -5 418 161 0 54 chr2 46074195 46074288 -207182295 + L1ME LINE L1 5655 5742 -424 414 136 0 15 chr2 46074291 46074357 -207182226 - AluSg/x SINE Alu -131 181 117 579 212 9 0 chr2 46074516 46074629 -207181954 + MSTB1 LTR MaLR 319 432 0 2511 251 89 32 chr2 46074719 46074880 -207181703 + L1MEc LINE L1 2934 3084 -3131 1914 143 20 3 chr2 46074880 46075181 -207181402 + AluSx SINE Alu 3 308 -4 2511 251 89 32 chr2 46075181 46075446 -207181137 + L1MEc LINE L1 3084 3332 -2883 1694 160 3 52 chr2 46075446 46075520 -207181063 - AluJb SINE Alu -19 293 217 2308 99 0 7 chr2 46075520 46075824 -207180759 - AluSq SINE Alu -9 304 3 1694 160 3 52 chr2 46075824 46076055 -207180528 - AluJb SINE Alu -95 217 3 2511 251 89 32 chr2 46076055 46076681 -207179902 + L1MEc LINE L1 3332 4047 -2168 11535 19 0 0 chr2 46076682 46078789 -207177794 + L1PA4 LINE L1 4046 6152 -3 4083 148 29 4 chr2 46079049 46079736 -207176847 - MER50 LTR ERV1 -30 704 1 4137 201 58 73 chr2 46079736 46080110 -207176473 + L1MEc LINE L1 4102 4480 -1753 2244 115 0 0 chr2 46080110 46080414 -207176169 + AluSx SINE Alu 1 304 -8 4137 201 58 73 chr2 46080414 46080605 -207175978 + L1MEc LINE L1 4480 4672 -1561 1972 123 14 4 chr2 46080605 46080882 -207175701 - AluSx SINE Alu -32 280 1 4137 201 58 73 chr2 46080882 46081231 -207175352 + L1MEc LINE L1 4672 5025 -1208 1494 207 3 0 chr2 46081231 46081516 -207175067 - AluJb SINE Alu -26 286 1 4137 201 58 73 chr2 46081516 46082262 -207174321 + L1MEc LINE L1 5025 5738 -495 3294 143 5 9 chr2 46083226 46083439 -207173144 + L1M3 LINE L1 5272 5484 -687 189 0 0 0 chr2 46083439 46083460 -207173123 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 3294 143 5 9 chr2 46083460 46083799 -207172784 + L1M3 LINE L1 5484 5822 -349 1743 138 11 11 chr2 46083800 46084061 -207172522 + AluJo SINE Alu 1 261 -51 287 164 18 18 chr2 46084165 46084220 -207172363 - Alu SINE Alu -248 55 1 1424 155 65 81 chr2 46084344 46084653 -207171930 + AluJo SINE Alu 1 304 -8 364 358 63 10 chr2 46085343 46085550 -207171033 + L1MEd LINE L1 964 1181 -4938 303 255 130 71 chr2 46085587 46085771 -207170812 + HAL1 LINE L1 1409 1603 -904 613 153 227 45 chr2 46086092 46086158 -207170425 - MER3 DNA MER1_type -1 208 155 1938 146 17 7 chr2 46086158 46086452 -207170131 + AluJb SINE Alu 2 298 -14 613 153 227 45 chr2 46086452 46086561 -207170022 - MER3 DNA MER1_type -54 155 1 389 311 157 47 chr2 46086959 46087072 -207169511 + L1MC4a LINE L1 5580 5679 -2129 1874 131 14 7 chr2 46087072 46087362 -207169221 - AluSx SINE Alu -15 297 6 389 311 157 47 chr2 46087362 46087630 -207168953 + L1MC4a LINE L1 5679 6003 -1805 244 282 14 0 chr2 46087963 46088034 -207168549 - MIR SINE MIR 0 262 191 285 259 139 19 chr2 46088257 46088365 -207168218 + L1ME LINE L1 5551 5671 -450 325 283 132 64 chr2 46090965 46091230 -207165353 + HAL1 LINE L1 59 341 -2166 180 0 0 0 chr2 46092735 46092755 -207163828 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3240 157 67 19 chr2 46092755 46093398 -207163185 + L1MB2 LINE L1 5496 6169 -2 1856 158 0 34 chr2 46093572 46093894 -207162689 + AluJb SINE Alu 1 311 -1 504 331 26 73 chr2 46094016 46094318 -207162265 + LTR67 LTR ERVL 7 294 -263 284 195 130 0 chr2 46094426 46094503 -207162080 + LTR67 LTR ERVL 471 557 0 2401 90 0 0 chr2 46095481 46095791 -207160792 + AluSg SINE Alu 1 310 0 1900 125 35 3 chr2 46095806 46096093 -207160490 + AluSx SINE Alu 3 298 -14 679 199 174 25 chr2 46096188 46096389 -207160194 + MIR SINE MIR 18 248 -14 551 201 75 50 chr2 46096459 46096618 -207159965 - MIR SINE MIR -92 170 8 2254 113 0 7 chr2 46096939 46097248 -207159335 + AluSq SINE Alu 1 307 -6 641 131 98 201 chr2 46097592 46097866 -207158717 + MER96B DNA MER1_type? 6 251 -166 892 163 25 6 chr2 46098074 46098234 -207158349 + FRAM SINE Alu 1 163 -13 228 35 0 0 chr2 46098338 46098367 -207158216 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 385 213 106 0 chr2 46098584 46098678 -207157905 + U13 snRNA snRNA 1 104 0 24 0 0 0 chr2 46098686 46098710 -207157873 + AT_rich Low_complexity Low_complexity 1 24 0 388 247 105 0 chr2 46098798 46099015 -207157568 + L1M4 LINE L1 5188 5428 -734 1129 160 5 5 chr2 46099043 46099237 -207157346 - AluJo SINE Alu -1 311 118 217 239 22 0 chr2 46099237 46099283 -207157300 + CT-rich Low_complexity Low_complexity 4 50 0 2246 106 0 0 chr2 46099524 46099825 -207156758 - AluSx SINE Alu -10 302 2 25 65 0 0 chr2 46099911 46099957 -207156626 + AT_rich Low_complexity Low_complexity 1 46 0 2196 101 0 7 chr2 46100043 46100331 -207156252 + AluSq SINE Alu 1 286 -27 2158 93 13 26 chr2 46101818 46102129 -207154454 - AluSx SINE Alu -5 307 1 1328 184 90 22 chr2 46102343 46102610 -207153973 - AluJo SINE Alu -27 285 1 2339 97 3 0 chr2 46102618 46102916 -207153667 - AluSp SINE Alu -9 304 6 2423 194 103 17 chr2 46102933 46103584 -207152999 + Charlie1 DNA MER1_type 2053 2759 -2 2474 82 0 0 chr2 46103698 46104004 -207152579 - AluSc SINE Alu -3 306 1 29 0 0 0 chr2 46106319 46106348 -207150235 + AT_rich Low_complexity Low_complexity 1 29 0 290 228 65 33 chr2 46108509 46108779 -207147804 + L1MC4a LINE L1 7282 7497 -317 27 0 0 0 chr2 46108963 46108990 -207147593 + AT_rich Low_complexity Low_complexity 1 27 0 518 247 26 104 chr2 46108994 46109043 -207147540 + L1MC4 LINE L1 7770 7821 -221 2313 94 3 0 chr2 46109043 46109341 -207147242 - AluSp SINE Alu -14 299 1 518 247 26 104 chr2 46109341 46109522 -207147061 + L1MC4 LINE L1 7821 7982 -60 1204 232 70 7 chr2 46109770 46110054 -207146529 + AluJo SINE Alu 1 302 0 1912 105 0 8 chr2 46110063 46110330 -207146253 + AluSg SINE Alu 44 308 -2 2003 115 17 7 chr2 46110423 46110719 -207145864 + AluSx SINE Alu 1 299 -13 810 128 8 0 chr2 46110968 46111085 -207145498 + AluJb SINE Alu 5 122 -190 2482 57 3 0 chr2 46111706 46112003 -207144580 - AluSp SINE Alu -15 298 1 32 0 0 0 chr2 46112365 46112397 -207144186 + AT_rich Low_complexity Low_complexity 1 32 0 420 255 23 30 chr2 46114014 46114223 -207142360 + L1ME4a LINE L1 5683 5882 -239 2148 96 14 3 chr2 46114357 46114650 -207141933 - AluY SINE Alu -15 296 1 263 119 0 0 chr2 46114705 46114747 -207141836 - Alu SINE Alu -7 295 254 304 146 11 0 chr2 46114751 46114805 -207141778 - Alu SINE Alu -262 40 1 2218 92 3 0 chr2 46115435 46115717 -207140866 - AluSq SINE Alu -30 283 1 2250 94 7 3 chr2 46115962 46116259 -207140324 + AluSg SINE Alu 3 300 -10 1790 172 0 23 chr2 46116265 46116567 -207140016 + AluJb SINE Alu 1 295 -17 29 0 0 0 chr2 46117231 46117260 -207139323 + AT_rich Low_complexity Low_complexity 1 29 0 715 159 23 23 chr2 46117289 46117421 -207139162 + FLAM_C SINE Alu 2 133 0 888 92 0 0 chr2 46118107 46118226 -207138357 - AluSg/x SINE Alu -6 304 186 306 129 0 0 chr2 46118752 46118814 -207137769 + (CA)n Simple_repeat Simple_repeat 2 63 0 1999 68 0 4 chr2 46119262 46119512 -207137071 - AluY SINE Alu -4 307 59 382 213 38 0 chr2 46119513 46119593 -207136990 + MIR SINE MIR 156 238 -24 278 303 64 0 chr2 46120377 46120486 -207136097 + L1MC4a LINE L1 5782 5897 -1911 270 263 73 73 chr2 46120508 46120687 -207135896 + L1ME4a LINE L1 5941 6119 -2 490 163 51 10 chr2 46123165 46123263 -207133320 + MER5B DNA MER1_type 77 178 0 404 227 80 16 chr2 46123880 46124034 -207132549 + MIR SINE MIR 57 261 -1 289 190 35 0 chr2 46124167 46124225 -207132358 + Charlie7 DNA MER1_type 2171 2230 -382 712 227 43 10 chr2 46124445 46124652 -207131931 - Charlie7 DNA MER1_type -259 2353 2140 681 138 41 24 chr2 46124700 46124823 -207131760 - AluSc SINE Alu -66 243 119 22 0 0 0 chr2 46124823 46124845 -207131738 + AT_rich Low_complexity Low_complexity 1 22 0 2227 106 0 3 chr2 46124879 46125172 -207131411 - AluSg SINE Alu -18 292 1 249 319 0 0 chr2 46125546 46125615 -207130968 - MIR SINE MIR -10 252 184 2277 116 0 0 chr2 46125688 46125990 -207130593 + AluSx SINE Alu 1 302 -10 471 333 101 0 chr2 46126265 46126484 -207130099 - MIR SINE MIR -14 248 8 23 33 0 0 chr2 46126518 46126548 -207130035 + AT_rich Low_complexity Low_complexity 1 30 0 901 170 26 70 chr2 46126571 46126730 -207129853 + L1MD3 LINE L1 7737 7881 -114 1760 160 17 27 chr2 46126730 46127024 -207129559 + AluJb SINE Alu 1 291 -21 901 170 26 70 chr2 46127024 46127135 -207129448 + L1MD3 LINE L1 7881 7995 0 3217 164 55 26 chr2 46127378 46128075 -207128508 + L1MC3 LINE L1 6933 7649 -136 572 259 153 31 chr2 46128130 46128455 -207128128 - MLT1G1 LTR MaLR -175 420 18 618 135 0 0 chr2 46128458 46128547 -207128036 - FRAM SINE Alu -17 159 71 2227 95 14 0 chr2 46128974 46129270 -207127313 - AluY SINE Alu -11 300 1 251 119 0 0 chr2 46129325 46129367 -207127216 - Alu SINE Alu -7 295 254 287 146 11 0 chr2 46129371 46129425 -207127158 - Alu SINE Alu -262 40 1 265 189 68 14 chr2 46130339 46130413 -207126170 + MER58 DNA MER1_type 19 96 -119 315 161 16 16 chr2 46130452 46130514 -207126069 + MER58 DNA MER1_type 2359 2420 0 264 289 74 118 chr2 46130530 46130921 -207125662 - L2 LINE L2 -4 3268 2895 2125 131 0 6 chr2 46130931 46131243 -207125340 + AluSx SINE Alu 1 310 -2 1812 109 18 42 chr2 46131255 46131361 -207125222 + AluSx SINE Alu 36 143 -169 1999 97 68 7 chr2 46131361 46131640 -207124943 + AluSx SINE Alu 6 301 -11 1812 109 18 42 chr2 46131640 46131816 -207124767 + AluSx SINE Alu 143 311 -1 23 0 0 0 chr2 46133954 46133977 -207122606 + AT_rich Low_complexity Low_complexity 1 23 0 434 322 33 93 chr2 46134225 46134299 -207122284 + L2 LINE L2 2824 2901 -371 1883 186 0 0 chr2 46134299 46134595 -207121988 - AluJb SINE Alu -16 296 1 434 322 33 93 chr2 46134595 46134610 -207121973 + L2 LINE L2 2901 2915 -357 1833 97 32 4 chr2 46134610 46134858 -207121725 - AluSg SINE Alu -55 255 1 434 322 33 93 chr2 46134858 46135165 -207121418 + L2 LINE L2 2915 3197 -75 2612 46 0 0 chr2 46135294 46135598 -207120985 - AluY SINE Alu -7 304 1 193 333 42 0 chr2 46135724 46135796 -207120787 + L2 LINE L2 3197 3271 -1 21 0 0 0 chr2 46136971 46136992 -207119591 + AT_rich Low_complexity Low_complexity 1 21 0 1739 108 6 108 chr2 46137899 46138215 -207118368 - AluSq SINE Alu -14 299 16 5605 100 41 21 chr2 46138838 46140048 -207116535 + L1PA15 LINE L1 4924 6165 0 31 0 0 0 chr2 46140055 46140086 -207116497 + AT_rich Low_complexity Low_complexity 1 31 0 531 226 30 30 chr2 46142136 46142269 -207114314 + MLT1H LTR MaLR 379 511 -38 313 342 0 17 chr2 46142978 46143095 -207113488 - L1MC4 LINE L1 -72 7970 7856 368 361 50 30 chr2 46143531 46143733 -207112850 - L1ME LINE L1 -365 5756 5551 2292 113 0 0 chr2 46143997 46144297 -207112286 + AluSx SINE Alu 1 300 -12 33 25 0 0 chr2 46145026 46145066 -207111517 + AT_rich Low_complexity Low_complexity 1 40 0 253 164 75 30 chr2 46146338 46146405 -207110178 - HsTC2 DNA Tc2 -609 1289 1220 * 464 236 27 0 chr2 46146388 46146498 -207110085 - HsTC2 DNA Tc2 -1772 126 14 266 286 0 0 chr2 46147602 46147665 -207108918 + L2 LINE L2 3194 3256 -16 2077 125 14 0 chr2 46148704 46148999 -207107584 - AluSx SINE Alu -13 299 1 842 138 0 0 chr2 46149210 46149326 -207107257 + FLAM_C SINE Alu 2 117 -26 30 27 0 0 chr2 46150271 46150308 -207106275 + AT_rich Low_complexity Low_complexity 1 37 0 1887 134 17 17 chr2 46150398 46150697 -207105886 + AluJo SINE Alu 1 299 -13 811 106 0 0 chr2 46151413 46151517 -207105066 - FLAM_A SINE Alu -17 125 22 810 219 47 9 chr2 46152605 46152820 -207103763 + L1MC4 LINE L1 6830 7052 -990 560 79 0 0 chr2 46153032 46153108 -207103475 + Alu SINE Alu 1 76 -233 586 286 68 46 chr2 46153164 46153793 -207102790 + L1M4 LINE L1 3350 3992 -2154 220 192 0 39 chr2 46153862 46153914 -207102669 - L2 LINE L2 -1086 2228 2179 3665 229 77 70 chr2 46154018 46154336 -207102247 + L2 LINE L2 1802 2116 -1197 1668 89 4 52 chr2 46154336 46154584 -207101999 - AluSq SINE Alu -76 237 2 3665 229 77 70 chr2 46154584 46155611 -207100972 + L2 LINE L2 2116 3155 -158 1476 169 37 30 chr2 46155611 46155907 -207100676 - AluJb SINE Alu -14 298 1 3665 229 77 70 chr2 46155907 46156067 -207100516 + L2 LINE L2 3155 3312 -1 523 293 102 9 chr2 46156087 46156312 -207100271 + L1M4 LINE L1 5152 5397 -749 826 158 0 16 chr2 46156314 46156441 -207100142 + FLAM_C SINE Alu 1 125 -18 228 120 160 0 chr2 46156441 46156491 -207100092 - Tigger4(Zombi) DNA MER2_type -2673 58 1 891 236 17 40 chr2 46156619 46156651 -207099932 + L1M4 LINE L1 4716 4747 -1399 2291 102 0 13 chr2 46156651 46156964 -207099619 + AluSx SINE Alu 1 309 -3 891 236 17 40 chr2 46156964 46157228 -207099355 + L1M4 LINE L1 4747 5005 -1141 1468 191 37 20 chr2 46157228 46157527 -207099056 + AluJb SINE Alu 1 304 -8 275 328 115 8 chr2 46157633 46157755 -207098828 - L2 LINE L2 0 3272 3138 286 168 30 89 chr2 46157793 46157894 -207098689 + L2 LINE L2 2219 2313 -1001 2038 121 0 13 chr2 46157928 46158226 -207098357 - AluSx SINE Alu -18 294 1 332 204 175 0 chr2 46158371 46158474 -207098109 - MER46C DNA MER2_type -126 212 92 1876 155 3 7 chr2 46158615 46158906 -207097677 + AluSx SINE Alu 1 290 -22 219 289 289 0 chr2 46158906 46159020 -207097563 + L2 LINE L2 2571 2717 -597 227 152 22 0 chr2 46159094 46159140 -207097443 + (TA)n Simple_repeat Simple_repeat 1 47 0 388 266 13 84 chr2 46159567 46159603 -207096980 - MER5B DNA MER1_type -29 149 112 2091 95 7 14 chr2 46159603 46159910 -207096673 + AluSq SINE Alu 1 305 0 388 266 13 84 chr2 46159910 46160026 -207096557 - MER5B DNA MER1_type -66 112 7 1524 186 17 17 chr2 46160150 46160441 -207096142 - AluJb SINE Alu -18 294 4 690 163 15 22 chr2 46161486 46161675 -207094908 + L1MB4 LINE L1 5740 6169 -11 29 28 0 0 chr2 46161733 46161769 -207094814 + AT_rich Low_complexity Low_complexity 1 36 0 683 204 8 0 chr2 46161896 46162028 -207094555 + MER94 DNA DNA 1 133 -1 1894 95 12 0 chr2 46162406 46162658 -207093925 - AluSx SINE Alu -10 302 48 23 0 0 0 chr2 46162771 46162794 -207093789 + AT_rich Low_complexity Low_complexity 1 23 0 324 347 96 10 chr2 46163581 46163780 -207092803 - MIR SINE MIR -15 247 32 552 192 170 45 chr2 46163940 46164142 -207092441 + MIR SINE MIR 34 262 0 2183 92 0 10 chr2 46166722 46167016 -207089567 - AluSp SINE Alu -21 292 2 2063 136 3 3 chr2 46167023 46167324 -207089259 - AluSx SINE Alu -8 304 4 730 168 38 23 chr2 46167353 46167484 -207089099 - FLAM_A SINE Alu 0 133 1 309 378 81 24 chr2 46167626 46167922 -207088661 + L2 LINE L2 2953 3265 -7 246 194 0 32 chr2 46168258 46168320 -207088263 - MLT1H LTR MaLR -392 157 98 438 288 167 19 chr2 46168835 46169099 -207087484 - MLT1K LTR MaLR -219 369 67 378 306 69 0 chr2 46169884 46170044 -207086539 + MIR SINE MIR 79 249 -13 1872 164 0 11 chr2 46170050 46170373 -207086210 - AluSx SINE Alu 0 320 1 265 269 0 21 chr2 46170493 46170586 -207085997 - HAL1 LINE L1 -1735 772 682 1907 132 19 47 chr2 46170611 46170975 -207085608 + MER46B DNA MER2_type 3 231 -5 280 267 95 19 chr2 46171164 46171269 -207085314 - HAL1 LINE L1 -2081 426 314 25 0 0 0 chr2 46172107 46172132 -207084451 + AT_rich Low_complexity Low_complexity 1 25 0 1525 168 14 61 chr2 46172232 46172529 -207084054 - AluSx SINE Alu -26 286 4 233 233 133 0 chr2 46172779 46172869 -207083714 - LTR67 LTR ERVL -29 528 427 229 374 11 0 chr2 46173243 46173334 -207083249 - LTR67 LTR ERVL -367 190 99 493 288 71 0 chr2 46173409 46173579 -207083004 + MIR SINE MIR 8 189 -73 959 251 87 9 chr2 46173579 46174006 -207082577 - L1M4 LINE L1 -2549 3597 3138 391 235 33 49 chr2 46174077 46174160 -207082423 - L1M4 LINE L1 -3143 3003 2920 1783 188 0 13 chr2 46174160 46174329 -207082254 - AluJo SINE Alu -13 299 134 2193 105 0 16 chr2 46174329 46174634 -207081949 - AluSq SINE Alu -13 300 1 1783 188 0 13 chr2 46174634 46174767 -207081816 - AluJo SINE Alu -178 134 1 391 235 33 49 chr2 46174767 46174866 -207081717 - L1M4 LINE L1 -3226 2920 2824 736 236 103 11 chr2 46174936 46175284 -207081299 - L1MC5 LINE L1 -60 7901 7522 1410 179 75 11 chr2 46175551 46175830 -207080753 + AluJo SINE Alu 1 297 -15 312 347 58 0 chr2 46175853 46175974 -207080609 - L1ME LINE L1 -5940 130 3 1961 164 23 0 chr2 46177189 46177488 -207079095 + AluJb SINE Alu 1 306 -6 288 268 12 24 chr2 46177647 46177729 -207078854 - MIR SINE MIR -24 238 158 220 354 101 35 chr2 46177845 46178043 -207078540 + L3b LINE CR1 1350 1560 -23 1584 150 4 8 chr2 46178223 46178469 -207078114 + AluJo SINE Alu 32 276 -36 229 163 0 41 chr2 46178474 46178523 -207078060 - Alu SINE Alu -136 167 121 24 53 0 0 chr2 46178711 46178749 -207077834 + AT_rich Low_complexity Low_complexity 1 38 0 25 0 0 0 chr2 46178784 46178809 -207077774 + AT_rich Low_complexity Low_complexity 1 25 0 1934 133 7 13 chr2 46179130 46179431 -207077152 - AluSx SINE Alu -13 299 1 389 246 41 25 chr2 46179475 46179597 -207076986 + AluJb SINE Alu 1 124 -178 2418 77 3 66 chr2 46179718 46179903 -207076680 - L1PB2 LINE L1 -4 6147 5952 2023 139 0 0 chr2 46179903 46180197 -207076386 - AluSx SINE Alu -18 294 1 2418 77 3 66 chr2 46180197 46180352 -207076231 - L1PB2 LINE L1 -199 5952 5831 2093 137 0 0 chr2 46180352 46180645 -207075938 - AluSx SINE Alu -19 293 1 2418 77 3 66 chr2 46180645 46180682 -207075901 - L1PB2 LINE L1 -320 5831 5793 422 257 59 55 chr2 46180782 46180984 -207075599 + L2 LINE L2 2931 3133 -180 626 278 86 5 chr2 46181287 46181474 -207075109 + MIR SINE MIR 61 262 0 25 31 0 0 chr2 46181823 46181855 -207074728 + AT_rich Low_complexity Low_complexity 1 32 0 231 184 20 0 chr2 46182363 46182412 -207074171 + L2 LINE L2 3264 3313 0 2011 158 0 3 chr2 46182875 46183179 -207073404 + AluJb SINE Alu 1 303 -9 455 259 27 0 chr2 46183671 46183783 -207072800 + L2 LINE L2 3193 3307 -6 186 354 72 26 chr2 46184609 46184804 -207071779 - L2 LINE L2 -853 2461 2258 198 0 0 0 chr2 46185037 46185059 -207071524 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 21 71 0 0 chr2 46185715 46185757 -207070826 + AT_rich Low_complexity Low_complexity 1 42 0 2333 109 0 0 chr2 46185791 46186093 -207070490 - AluSx SINE Alu -10 302 1 367 250 70 0 chr2 46188759 46188859 -207067724 - MIR SINE MIR -26 236 130 680 118 56 169 chr2 46188859 46188981 -207067602 - AluJo SINE Alu -68 244 147 2419 50 0 30 chr2 46188981 46189281 -207067302 + AluY SINE Alu 1 291 -20 680 118 56 169 chr2 46189281 46189336 -207067247 - AluJo SINE Alu -165 147 87 397 338 5 56 chr2 46189654 46189765 -207066818 + MIR SINE MIR 2 98 -164 1946 122 61 25 chr2 46189765 46190127 -207066456 + THE1C LTR MaLR 1 375 0 397 338 5 56 chr2 46190127 46190231 -207066352 + MIR SINE MIR 98 206 -56 641 263 32 77 chr2 46190259 46190366 -207066217 - MIR SINE MIR -11 251 141 2112 103 0 14 chr2 46190366 46190656 -207065927 - AluSc SINE Alu -20 289 4 641 263 32 77 chr2 46190656 46190795 -207065788 - MIR SINE MIR -121 141 16 656 218 27 27 chr2 46190811 46190958 -207065625 + FRAM SINE Alu 23 169 -7 584 101 20 30 chr2 46190966 46191065 -207065518 - L1MB3 LINE L1 -7 6176 6079 2101 120 7 10 chr2 46191076 46191385 -207065198 - AluSc SINE Alu -1 308 1 483 305 113 0 chr2 46191879 46192082 -207064501 - MLT1G-int LTR MaLR -830 541 316 234 177 81 16 chr2 46192112 46192174 -207064409 - MLT1G-int LTR MaLR -1648 87 22 925 255 173 23 chr2 46192194 46192373 -207064210 - MLT1G LTR MaLR 0 590 439 1679 133 20 33 chr2 46192373 46192673 -207063910 - AluSq SINE Alu -14 299 4 925 255 173 23 chr2 46192673 46192850 -207063733 - MLT1G LTR MaLR -151 439 149 216 0 0 0 chr2 46192852 46192876 -207063707 + (T)n Simple_repeat Simple_repeat 1 24 0 929 169 6 45 chr2 46192992 46193169 -207063414 + AluSc SINE Alu 127 296 -13 1888 168 7 0 chr2 46193738 46194036 -207062547 - AluJo SINE Alu -10 302 3 2387 64 0 0 chr2 46195203 46195515 -207061068 - AluSc SINE Alu 0 312 1 3932 168 28 75 chr2 46195635 46196764 -207059819 - L1MB7 LINE L1 -25 6159 5093 604 244 133 11 chr2 46198136 46198316 -207058267 + MIR SINE MIR 15 216 -46 2456 84 0 3 chr2 46199934 46200243 -207056340 - AluSg SINE Alu -2 308 1 273 287 74 70 chr2 46200500 46200588 -207055995 + MIR SINE MIR 12 98 -164 2219 112 7 0 chr2 46200588 46200892 -207055691 - AluSx SINE Alu -6 306 1 273 287 74 70 chr2 46200892 46201047 -207055536 + MIR SINE MIR 98 256 -6 368 242 183 39 chr2 46203104 46203257 -207053326 - L2 LINE L2 -5 3308 3134 2142 127 0 10 chr2 46203259 46203566 -207053017 - AluSx SINE Alu -5 307 4 932 191 102 19 chr2 46203827 46204042 -207052541 - MIR SINE MIR -19 243 11 425 311 25 0 chr2 46204094 46204213 -207052370 + L2 LINE L2 3151 3272 0 319 266 78 78 chr2 46204708 46205132 -207051451 - L1ME4a LINE L1 -3 6118 5695 795 181 44 40 chr2 46205328 46205554 -207051029 - L1MC5 LINE L1 -435 7526 7300 260 140 60 0 chr2 46205704 46205754 -207050829 - MLT1G1 LTR MaLR 0 595 543 463 294 53 115 chr2 46205755 46206173 -207050410 + L1MA5 LINE L1 414 805 -5498 4371 231 59 31 chr2 46206317 46207861 -207048722 + L1MA5 LINE L1 799 2326 -4056 1778 128 8 0 chr2 46207861 46208110 -207048473 + AluSx SINE Alu 1 251 -61 4371 231 59 31 chr2 46208110 46209512 -207047071 + L1MA5 LINE L1 2326 3687 -2695 1730 149 52 21 chr2 46209514 46209803 -207046780 + AluJb SINE Alu 1 298 -14 2228 95 0 23 chr2 46209805 46210110 -207046473 + AluSq SINE Alu 11 308 -5 3129 167 21 6 chr2 46210132 46211180 -207045403 + L1MA5 LINE L1 4952 6015 -521 1824 183 3 6 chr2 46211182 46211494 -207045089 + AluJo SINE Alu 1 311 -1 1049 115 47 3 chr2 46211494 46211688 -207044895 + L1MA5 LINE L1 6131 6530 -2 818 112 22 0 chr2 46211688 46211818 -207044765 + L1MA5 LINE L1 6398 6534 -2 326 300 88 93 chr2 46211947 46212174 -207044409 - HAL1 LINE L1 -1149 1358 1132 498 195 44 0 chr2 46212174 46212287 -207044296 - L1MB4 LINE L1 0 6180 6063 326 300 88 93 chr2 46212287 46212436 -207044147 - HAL1 LINE L1 -1375 1132 984 415 296 83 26 chr2 46213230 46213494 -207043089 - L1MB4 LINE L1 -2275 5533 5255 2262 81 20 0 chr2 46213540 46213836 -207042747 - AluSx SINE Alu -10 302 1 22 35 0 0 chr2 46213871 46213900 -207042683 + AT_rich Low_complexity Low_complexity 1 29 0 1446 156 4 13 chr2 46213918 46214155 -207042428 + AluJb SINE Alu 58 292 -20 240 286 151 52 chr2 46214167 46214273 -207042310 + MIR SINE MIR 19 144 -118 1478 158 103 0 chr2 46214273 46214526 -207042057 - AluSx SINE Alu -33 279 1 240 286 151 52 chr2 46214526 46214573 -207042010 + MIR SINE MIR 144 185 -77 1538 99 0 14 chr2 46214623 46214834 -207041749 - AluY SINE Alu -19 292 85 206 247 182 0 chr2 46214904 46214981 -207041602 + MIR SINE MIR 172 262 0 202 296 183 0 chr2 46215111 46215226 -207041357 - L2 LINE L2 -1 3271 3136 22 35 0 0 chr2 46215804 46215833 -207040750 + AT_rich Low_complexity Low_complexity 1 29 0 2422 93 0 3 chr2 46216709 46217022 -207039561 + AluSx SINE Alu 1 312 0 26 50 0 0 chr2 46217691 46217731 -207038852 + AT_rich Low_complexity Low_complexity 1 40 0 2203 98 3 3 chr2 46217865 46218160 -207038423 - AluSc SINE Alu -14 295 1 493 263 141 0 chr2 46219322 46219478 -207037105 + MIR SINE MIR 85 262 0 23 33 0 0 chr2 46219597 46219627 -207036956 + AT_rich Low_complexity Low_complexity 1 30 0 2544 45 7 0 chr2 46221235 46221543 -207035040 - AluY SINE Alu 0 311 2 231 190 17 17 chr2 46223397 46223455 -207033128 + (TA)n Simple_repeat Simple_repeat 2 59 0 200 167 0 0 chr2 46223545 46223575 -207033008 + (TG)n Simple_repeat Simple_repeat 1 30 0 2450 234 50 34 chr2 46226734 46228002 -207028581 + L1ME3A LINE L1 4606 5851 -319 1992 145 48 0 chr2 46228002 46228333 -207028250 - MER7A DNA MER2_type 0 346 2 2450 234 50 34 chr2 46228333 46228508 -207028075 + L1ME3A LINE L1 5851 6071 -99 2230 98 0 7 chr2 46228508 46228803 -207027780 - AluSx SINE Alu -10 302 10 2450 234 50 34 chr2 46228803 46228900 -207027683 + L1ME3A LINE L1 6071 6165 -5 194 0 39 0 chr2 46228931 46228957 -207027626 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 298 278 137 116 chr2 46229234 46229475 -207027108 + L2 LINE L2 3014 3259 -13 2236 91 0 24 chr2 46230762 46231060 -207025523 + AluSp SINE Alu 1 291 -22 1135 153 6 0 chr2 46231089 46231265 -207025318 + AluJb SINE Alu 125 301 -11 315 0 0 0 chr2 46231389 46231424 -207025159 + (TG)n Simple_repeat Simple_repeat 2 36 0 1433 203 4 18 chr2 46231429 46231705 -207024878 - AluJo SINE Alu -30 282 11 2345 103 0 0 chr2 46231789 46232091 -207024492 - AluSx SINE Alu -10 302 1 740 182 0 0 chr2 46232400 46232521 -207024062 + L1PA16 LINE L1 6023 6143 -23 225 65 0 0 chr2 46232539 46232570 -207024013 + (CA)n Simple_repeat Simple_repeat 2 32 0 2476 81 3 0 chr2 46232811 46233120 -207023463 - AluSp SINE Alu -3 310 1 1850 162 7 10 chr2 46233413 46233716 -207022867 + AluJb SINE Alu 1 302 -10 288 250 13 0 chr2 46233876 46233952 -207022631 + MER97b DNA MER1_type? 103 179 -874 24 32 0 0 chr2 46234881 46234912 -207021671 + AT_rich Low_complexity Low_complexity 1 31 0 31 44 0 0 chr2 46235005 46235050 -207021533 + AT_rich Low_complexity Low_complexity 1 45 0 2298 105 0 10 chr2 46235435 46235740 -207020843 - AluSg SINE Alu -8 302 1 297 258 197 66 chr2 46237339 46237552 -207019031 + L2 LINE L2 3029 3269 -3 1670 172 3 17 chr2 46237693 46237989 -207018594 - AluJo SINE Alu -20 292 1 312 27 0 0 chr2 46240255 46240292 -207016291 + (GA)n Simple_repeat Simple_repeat 2 38 0 21 36 0 0 chr2 46240697 46240725 -207015858 + AT_rich Low_complexity Low_complexity 1 28 0 2166 125 17 0 chr2 46243232 46243527 -207013056 - AluSx SINE Alu -12 300 1 548 111 0 0 chr2 46244085 46244166 -207012417 + LTR29 LTR ERV1 476 556 -66 754 142 37 45 chr2 46244281 46244415 -207012168 + FRAM SINE Alu 1 132 -44 1459 114 9 9 chr2 46244569 46244780 -207011803 + AluSq SINE Alu 86 296 -17 864 189 27 32 chr2 46246274 46246459 -207010124 - MLT1A2 LTR MaLR -2 372 189 293 183 0 14 chr2 46246483 46246554 -207010029 + GA-rich Low_complexity Low_complexity 1 70 0 1039 154 44 11 chr2 46246564 46246746 -207009837 - MLT1A2 LTR MaLR -186 188 1 194 279 0 0 chr2 46247026 46247069 -207009514 - L2 LINE L2 0 3272 3230 1067 168 10 0 chr2 46247147 46247344 -207009239 - L1MC/D LINE L1 -839 5520 5322 2363 170 44 8 chr2 46247344 46247768 -207008815 - MSTB1 LTR MaLR 0 432 1 1266 215 48 13 chr2 46247768 46248163 -207008420 - L1MC/D LINE L1 -820 5326 4918 809 134 64 76 chr2 46248167 46248324 -207008259 - Tigger2a DNA MER2_type -279 155 1 1669 142 49 8 chr2 46248379 46248698 -207007885 - AluJb SINE Alu 0 334 5 311 206 33 22 chr2 46250181 46250273 -207006310 - MIR SINE MIR -43 219 127 208 257 100 0 chr2 46250432 46250502 -207006081 - MER5C DNA MER1_type -247 77 1 267 289 22 0 chr2 46250510 46250600 -207005983 - MER5C DNA MER1_type 0 324 233 289 268 134 0 chr2 46250616 46250713 -207005870 - MER5C DNA MER1_type -214 110 1 2264 108 0 0 chr2 46251359 46251654 -207004929 + AluSx SINE Alu 1 295 -17 192 222 222 37 chr2 46251685 46251766 -207004817 - MIR SINE MIR -131 131 36 1641 148 19 4 chr2 46251851 46252115 -207004468 - AluJb SINE Alu -3 309 42 1231 199 170 44 chr2 46252146 46252552 -207004031 + MSTB2 LTR MaLR 1 457 0 2572 211 22 33 chr2 46252553 46253193 -207003390 - L1MC4a LINE L1 -57 7751 7119 2401 79 3 66 chr2 46253208 46253393 -207003190 - L1PB2 LINE L1 -4 6147 5952 2043 137 0 0 chr2 46253393 46253686 -207002897 - AluSx SINE Alu -19 293 1 2401 79 3 66 chr2 46253686 46253841 -207002742 - L1PB2 LINE L1 -199 5952 5831 2107 133 0 0 chr2 46253841 46254134 -207002449 - AluSx SINE Alu -19 293 1 2401 79 3 66 chr2 46254134 46254171 -207002412 - L1PB2 LINE L1 -320 5831 5793 422 257 59 55 chr2 46254271 46254473 -207002110 + L2 LINE L2 2931 3133 -180 626 278 86 5 chr2 46254776 46254963 -207001620 + MIR SINE MIR 61 262 0 25 31 0 0 chr2 46255312 46255344 -207001239 + AT_rich Low_complexity Low_complexity 1 32 0 231 184 20 0 chr2 46255852 46255901 -207000682 + L2 LINE L2 3264 3313 0 2011 158 0 3 chr2 46256364 46256668 -206999915 + AluJb SINE Alu 1 303 -9 455 259 27 0 chr2 46257165 46257277 -206999306 + L2 LINE L2 3193 3307 -6 186 354 72 26 chr2 46258103 46258298 -206998285 - L2 LINE L2 -853 2461 2258 198 0 0 0 chr2 46258531 46258553 -206998030 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 21 71 0 0 chr2 46259209 46259251 -206997332 + AT_rich Low_complexity Low_complexity 1 42 0 2306 113 0 0 chr2 46259285 46259587 -206996996 - AluSx SINE Alu -10 302 1 367 250 70 0 chr2 46262253 46262353 -206994230 - MIR SINE MIR -26 236 130 763 135 32 248 chr2 46262353 46262475 -206994108 - AluJo SINE Alu -68 244 228 2425 50 0 27 chr2 46262475 46262774 -206993809 + AluY SINE Alu 1 291 -20 763 135 32 248 chr2 46262774 46262962 -206993621 - AluJo SINE Alu -84 228 1 397 338 5 56 chr2 46263119 46263230 -206993353 + MIR SINE MIR 2 98 -164 1946 122 61 25 chr2 46263230 46263592 -206992991 + THE1C LTR MaLR 1 375 0 397 338 5 56 chr2 46263592 46263696 -206992887 + MIR SINE MIR 98 206 -56 641 263 32 77 chr2 46263724 46263831 -206992752 - MIR SINE MIR -11 251 141 2098 107 0 14 chr2 46263831 46264121 -206992462 - AluSc SINE Alu -20 289 4 641 263 32 77 chr2 46264121 46264260 -206992323 - MIR SINE MIR -121 141 16 656 218 27 27 chr2 46264276 46264423 -206992160 + FRAM SINE Alu 23 169 -7 584 101 20 30 chr2 46264431 46264530 -206992053 - L1MB3 LINE L1 -7 6176 6079 2092 120 7 10 chr2 46264541 46264850 -206991733 - AluSc SINE Alu -1 308 1 483 305 113 0 chr2 46265344 46265547 -206991036 - MLT1G-int LTR MaLR -830 541 316 234 177 81 16 chr2 46265577 46265639 -206990944 - MLT1G-int LTR MaLR -1648 87 22 1529 236 105 36 chr2 46265659 46265838 -206990745 - MLT1G LTR MaLR 0 590 425 2117 124 0 7 chr2 46265838 46266137 -206990446 - AluSx SINE Alu -12 300 4 1529 236 105 36 chr2 46266137 46266316 -206990267 - MLT1G LTR MaLR -165 425 260 2481 73 3 0 chr2 46266316 46266617 -206989966 - AluSx SINE Alu -5 307 6 1529 236 105 36 chr2 46266617 46266809 -206989774 - MLT1G LTR MaLR -330 260 1 314 162 26 34 chr2 46267005 46267122 -206989461 + CT-rich Low_complexity Low_complexity 1 116 0 300 342 84 13 chr2 46267252 46267407 -206989176 + L2 LINE L2 3107 3272 0 2251 100 3 0 chr2 46267809 46268099 -206988484 - AluY SINE Alu -20 291 1 508 305 58 6 chr2 46268200 46268374 -206988209 - MIR SINE MIR -71 191 9 198 0 0 0 chr2 46268388 46268410 -206988173 + (TTTTC)n Simple_repeat Simple_repeat 2 23 0 1254 34 0 0 chr2 46268410 46268556 -206988027 - L1PA3 LINE L1 -7 6148 6003 1148 29 0 0 chr2 46268556 46268694 -206987889 + L1PA2 LINE L1 5764 5901 -254 2493 191 46 28 chr2 46268880 46269383 -206987200 - MLT2B1 LTR ERVL -8 512 1 924 182 5 73 chr2 46269408 46269628 -206986955 - L1MB7 LINE L1 -8 6176 5972 1100 152 0 18 chr2 46269634 46269805 -206986778 - AluJ SINE Alu -8 304 137 808 77 59 6 chr2 46269806 46269976 -206986607 + (TA)n Simple_repeat Simple_repeat 2 180 0 590 183 70 0 chr2 46269976 46270091 -206986492 - AluJ SINE Alu -181 131 9 1600 169 27 15 chr2 46270229 46270561 -206986022 - L1MC1 LINE L1 0 6333 5998 1784 210 140 75 chr2 46270862 46271832 -206984751 - L1MC5 LINE L1 -33 7928 6896 21 0 0 0 chr2 46272899 46272920 -206983663 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr2 46273541 46273576 -206983007 + AT_rich Low_complexity Low_complexity 1 35 0 214 366 83 65 chr2 46275018 46275234 -206981349 - L2 LINE L2 -13 3259 3040 2283 95 7 3 chr2 46275363 46275659 -206980924 - AluSx SINE Alu -15 297 1 2274 115 0 0 chr2 46275788 46276084 -206980499 - AluSq SINE Alu -17 296 1 13328 169 25 23 chr2 46276085 46278873 -206977710 + L1PB2 LINE L1 1864 4647 -1504 2194 120 0 10 chr2 46278873 46279173 -206977410 - AluSx SINE Alu -15 297 1 13328 169 25 23 chr2 46279173 46280104 -206976479 + L1PB2 LINE L1 4647 5575 -576 1782 174 10 3 chr2 46280104 46280402 -206976181 - AluJb SINE Alu -6 306 7 13328 169 25 23 chr2 46280402 46280633 -206975950 + L1PB2 LINE L1 5575 5804 -347 2383 88 0 3 chr2 46280633 46280941 -206975642 + AluSg1 SINE Alu 1 307 -2 13328 169 25 23 chr2 46280941 46281321 -206975262 + L1PB2 LINE L1 5804 6146 -5 495 33 0 0 chr2 46281492 46281553 -206975030 + (TG)n Simple_repeat Simple_repeat 2 62 0 1993 100 76 14 chr2 46281567 46281856 -206974727 + AluSq SINE Alu 1 307 -6 4364 216 57 21 chr2 46281905 46282690 -206973893 - L1MC4 LINE L1 -141 7901 7146 231 114 0 0 chr2 46282690 46282725 -206973858 + (TA)n Simple_repeat Simple_repeat 2 36 0 4364 216 57 21 chr2 46282725 46283015 -206973568 - L1MC4 LINE L1 -896 7146 6778 1932 148 3 0 chr2 46283015 46283306 -206973277 + AluJb SINE Alu 1 292 -20 4364 216 57 21 chr2 46283306 46283402 -206973181 - L1MC4 LINE L1 -1264 6778 6687 735 298 65 20 chr2 46283388 46284094 -206972489 - L1M4 LINE L1 -1121 5025 4279 * 1381 171 0 0 chr2 46284121 46284332 -206972251 + AluJb SINE Alu 88 298 -14 2347 74 10 7 chr2 46284393 46284691 -206971892 + AluSp SINE Alu 1 299 -14 444 37 0 0 chr2 46285030 46285084 -206971499 + (CA)n Simple_repeat Simple_repeat 2 55 0 240 35 0 0 chr2 46285083 46285112 -206971471 + (TC)n Simple_repeat Simple_repeat 1 29 0 * 21 0 0 0 chr2 46285951 46285972 -206970611 + AT_rich Low_complexity Low_complexity 1 21 0 28 48 0 0 chr2 46287468 46287510 -206969073 + AT_rich Low_complexity Low_complexity 1 42 0 197 312 21 54 chr2 46287936 46288029 -206968554 - L2 LINE L2 -32 3281 3192 231 0 24 49 chr2 46288078 46288119 -206968464 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 345 243 63 36 chr2 46288121 46288232 -206968351 - MIR SINE MIR -129 133 20 474 65 0 0 chr2 46288700 46288762 -206967821 + (CA)n Simple_repeat Simple_repeat 2 63 0 921 196 25 0 chr2 46289927 46290090 -206966493 + FAM SINE Alu 5 171 -4 279 196 290 28 chr2 46290229 46290336 -206966247 + MIR SINE MIR 110 244 -18 239 235 88 49 chr2 46290674 46290776 -206965807 - L2 LINE L2 -1 3312 3207 2730 192 60 12 chr2 46290984 46291579 -206965004 + MLT1E3 LTR MaLR 1 624 0 647 122 20 0 chr2 46292079 46292177 -206964406 - FRAM SINE Alu -10 166 67 1781 170 37 3 chr2 46292665 46292965 -206963618 + AluJo SINE Alu 3 312 0 408 206 29 22 chr2 46294302 46294412 -206962171 - MIR SINE MIR -38 224 115 1299 121 73 26 chr2 46294535 46294767 -206961816 - L1PB4 LINE L1 -2 6154 5912 216 342 51 0 chr2 46294966 46295045 -206961538 + L3 LINE CR1 1494 1576 -1 892 248 74 9 chr2 46295132 46295362 -206961221 - MIR SINE MIR -12 250 6 1857 182 7 0 chr2 46295910 46296206 -206960377 - AluSx SINE Alu -14 298 1 314 316 68 38 chr2 46296648 46296781 -206959802 - L2 LINE L2 0 3272 3136 541 209 6 51 chr2 46296846 46297000 -206959583 + MIR SINE MIR 22 242 -20 767 207 0 0 chr2 46297000 46297135 -206959448 + AluJo SINE Alu 2 136 -176 1584 199 10 20 chr2 46297138 46297439 -206959144 + AluJb SINE Alu 5 302 -10 1081 302 141 35 chr2 46297747 46298599 -206957984 - L2 LINE L2 -655 2659 1718 2322 109 0 0 chr2 46298673 46298984 -206957599 - AluSx SINE Alu -1 311 1 2923 9 0 0 chr2 46298996 46299313 -206957270 - AluYb8 SINE Alu -1 317 1 912 112 8 30 chr2 46299341 46299475 -206957108 + FLAM_C SINE Alu 2 132 -11 255 170 0 0 chr2 46300097 46300144 -206956439 + CT-rich Low_complexity Low_complexity 2 48 0 411 73 0 0 chr2 46300564 46300619 -206955964 + (TTCA)n Simple_repeat Simple_repeat 2 56 0 1587 163 62 4 chr2 46300624 46300882 -206955701 - AluJo SINE Alu -37 275 3 2329 139 15 12 chr2 46301090 46301492 -206955091 + L1PA16 LINE L1 5757 6159 -7 189 121 0 0 chr2 46301492 46301525 -206955058 + (TG)n Simple_repeat Simple_repeat 2 34 0 249 108 0 0 chr2 46301525 46301562 -206955021 + (TAGA)n Simple_repeat Simple_repeat 4 40 0 239 54 27 0 chr2 46301565 46301602 -206954981 + (TCTA)n Simple_repeat Simple_repeat 1 38 0 842 315 187 72 chr2 46301747 46302820 -206953763 - L3 LINE CR1 -3 1574 306 1738 142 51 30 chr2 46302820 46303115 -206953468 - AluJo SINE Alu -10 302 2 842 315 187 72 chr2 46303115 46303422 -206953161 - L3 LINE CR1 -1271 306 36 825 203 165 9 chr2 46304921 46305115 -206951468 - MIR SINE MIR 0 262 31 2211 124 0 0 chr2 46305115 46305405 -206951178 - AluSx SINE Alu -22 290 1 825 203 165 9 chr2 46305405 46305422 -206951161 - MIR SINE MIR -231 31 18 276 261 118 31 chr2 46305504 46305665 -206950918 - MIR SINE MIR 0 262 88 27 49 0 0 chr2 46305669 46305710 -206950873 + AT_rich Low_complexity Low_complexity 1 41 0 5217 42 0 14 chr2 46306012 46306659 -206949924 - L1PA5 LINE L1 -1 6153 5516 2233 111 3 0 chr2 46306721 46307019 -206949564 - AluSx SINE Alu -13 299 1 207 0 0 0 chr2 46307082 46307105 -206949478 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1830 119 43 25 chr2 46307107 46307384 -206949199 - AluSq SINE Alu -31 282 1 437 305 38 64 chr2 46307856 46308042 -206948541 + MIR3 SINE MIR 20 198 -28 419 193 108 97 chr2 46308108 46308154 -206948429 - MER5B DNA MER1_type 0 178 134 189 0 0 0 chr2 46308154 46308175 -206948408 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 419 193 108 97 chr2 46308175 46308304 -206948279 - MER5B DNA MER1_type -44 134 1 390 329 115 65 chr2 46310413 46310753 -206945830 - L2 LINE L2 0 3272 2916 217 289 110 51 chr2 46311091 46311475 -206945108 - L2 LINE L2 -329 2943 2523 189 237 0 0 chr2 46312062 46312100 -206944483 + L3 LINE CR1 1537 1574 -3 698 183 0 29 chr2 46314237 46314374 -206942209 + FLAM_A SINE Alu 1 133 0 1186 145 72 0 chr2 46314526 46314747 -206941836 - L1MB3 LINE L1 -2 6181 5945 845 136 0 0 chr2 46314768 46314886 -206941697 - FLAM_C SINE Alu -20 123 6 1454 190 9 19 chr2 46314890 46314945 -206941638 - L1MB3 LINE L1 -244 5939 5885 432 274 40 53 chr2 46314945 46315248 -206941335 - L1PA14 LINE L1 -277 5884 5586 1169 148 261 7 chr2 46315257 46315548 -206941035 - L1M3 LINE L1 -457 5726 5362 794 190 48 9 chr2 46315728 46315939 -206940644 - L1PA14 LINE L1 -748 5408 5188 559 248 29 116 chr2 46316018 46316474 -206940109 - L1M3 LINE L1 -948 5198 4783 1728 268 38 19 chr2 46316620 46317149 -206939434 - MER74B LTR ERVL -4 618 80 227 237 27 119 chr2 46317186 46317280 -206939303 - L1M3 LINE L1 -1543 4603 4502 207 0 0 0 chr2 46317280 46317303 -206939280 + (TTAA)n Simple_repeat Simple_repeat 3 25 0 1906 118 3 51 chr2 46317303 46317599 -206938984 - AluSx SINE Alu -30 282 1 2122 127 0 0 chr2 46317609 46317923 -206938660 - AluSx SINE Alu 0 314 1 227 237 27 119 chr2 46317923 46318034 -206938549 - L1M3 LINE L1 -1652 4494 4405 1547 162 60 25 chr2 46318133 46318417 -206938166 + AluJb SINE Alu 2 295 -17 2490 93 0 3 chr2 46318589 46318902 -206937681 + AluSq SINE Alu 1 312 -1 297 261 57 0 chr2 46319763 46319851 -206936732 + MER34 LTR ERV1 3 95 -447 1827 192 0 0 chr2 46319892 46320184 -206936399 + AluJb SINE Alu 12 303 -9 564 84 0 0 chr2 46320188 46320271 -206936312 + (GGGAGA)n Simple_repeat Simple_repeat 2 84 0 567 303 41 12 chr2 46320418 46320662 -206935921 + MER34 LTR ERV1 257 507 -35 321 26 0 0 chr2 46322788 46322826 -206933757 + (TAAAA)n Simple_repeat Simple_repeat 2 39 0 261 406 14 7 chr2 46323855 46323993 -206932590 - MIR3 SINE MIR -67 141 3 2278 95 0 0 chr2 46324264 46324560 -206932023 + AluSg SINE Alu 2 297 -13 407 261 17 52 chr2 46325734 46325849 -206930734 - L2 LINE L2 -4 3268 3158 1706 183 6 13 chr2 46326056 46326367 -206930216 + AluJo SINE Alu 1 309 -3 263 210 0 0 chr2 46326379 46326441 -206930142 - L1ME2 LINE L1 -24 6140 6079 830 223 134 32 chr2 46326504 46326818 -206929765 - L1ME2 LINE L1 -73 6091 5746 219 280 127 59 chr2 46327149 46327267 -206929316 - L2 LINE L2 0 3272 3147 2402 71 0 3 chr2 46327317 46327612 -206928971 + AluY SINE Alu 1 294 -17 457 351 66 28 chr2 46327649 46327937 -206928646 + L3 LINE CR1 177 475 -1102 188 300 0 33 chr2 46328734 46328794 -206927789 - MER5A DNA MER1_type -4 185 128 2604 208 48 75 chr2 46328795 46329722 -206926861 - L1ME2 LINE L1 -9 6224 5323 1682 231 25 71 chr2 46329732 46329984 -206926599 - L1ME2 LINE L1 -1541 4674 4412 8907 44 1 215 chr2 46329984 46331747 -206924836 + SVA Other Other 1 1386 0 1682 231 25 71 chr2 46331747 46332044 -206924539 - L1ME2 LINE L1 -1803 4412 4150 980 209 43 8 chr2 46332034 46332269 -206924314 - L1ME2 LINE L1 -2420 3795 3553 * 8787 28 5 0 chr2 46332266 46333413 -206923170 - L1PA3 LINE L1 -667 5488 4338 5752 23 0 0 chr2 46333413 46334069 -206922514 + L1PA3 LINE L1 5495 6154 -1 611 267 22 22 chr2 46334080 46334312 -206922271 - L1ME2 LINE L1 -2652 3563 3332 1971 110 33 7 chr2 46334312 46334612 -206921971 + MER44D DNA MER2_type 243 605 0 920 205 96 4 chr2 46334616 46334865 -206921718 - L1ME2 LINE L1 -3345 2870 2599 2567 254 39 13 chr2 46334882 46335576 -206921007 - L1ME2 LINE L1 -5650 746 35 2298 97 3 0 chr2 46335607 46335905 -206920678 - AluSp SINE Alu -13 300 2 7311 68 18 0 chr2 46335905 46337169 -206919414 + L1P3 LINE L1 4389 5665 -489 534 90 13 0 chr2 46337169 46337247 -206919336 - AluS SINE Alu -233 80 2 1842 71 40 0 chr2 46337247 46337500 -206919083 + L1PA7 LINE L1 4389 4651 -1495 3635 82 0 4 chr2 46337505 46337992 -206918591 + L1PA7 LINE L1 5670 6154 0 2108 139 3 3 chr2 46338010 46338320 -206918263 + AluSx SINE Alu 1 310 -2 342 246 110 17 chr2 46338325 46338443 -206918140 + MER5A DNA MER1_type 61 189 0 1171 169 169 71 chr2 46339380 46339571 -206917012 - Charlie4a DNA MER1_type -1453 508 337 2163 96 4 0 chr2 46339571 46339878 -206916705 - AluSg SINE Alu 0 308 1 1171 169 169 71 chr2 46339878 46340148 -206916435 - Charlie4a DNA MER1_type -1624 337 1 1908 156 3 7 chr2 46342104 46342411 -206914172 - AluJo SINE Alu -6 306 1 2289 79 4 0 chr2 46343028 46343307 -206913276 + AluSp SINE Alu 11 290 -23 37 39 0 0 chr2 46343312 46343363 -206913220 + AT_rich Low_complexity Low_complexity 1 51 0 384 242 128 60 chr2 46343678 46343846 -206912737 - L1ME4a LINE L1 -57 6064 5867 1660 135 89 0 chr2 46343846 46344126 -206912457 - AluJb SINE Alu 0 303 1 384 242 128 60 chr2 46344126 46344237 -206912346 - L1ME4a LINE L1 -254 5867 5765 1947 150 129 11 chr2 46344348 46344729 -206911854 - MSTA LTR MaLR -2 426 1 228 238 0 0 chr2 46344876 46344939 -206911644 + (TA)n Simple_repeat Simple_repeat 2 64 0 2030 116 3 11 chr2 46344940 46345224 -206911359 - AluSx SINE Alu -20 292 11 24 32 0 0 chr2 46345263 46345294 -206911289 + AT_rich Low_complexity Low_complexity 1 31 0 638 244 67 53 chr2 46345295 46345505 -206911078 - MLT1H LTR MaLR 0 550 343 490 260 172 13 chr2 46347171 46347398 -206909185 - MARNA DNA Mariner -63 523 261 281 290 140 0 chr2 46347546 46347646 -206908937 - MIR3 SINE MIR -23 185 72 670 232 70 69 chr2 46349750 46349950 -206906633 - L1MC5 LINE L1 -66 7895 7697 2577 59 0 0 chr2 46349950 46350257 -206906326 - AluY SINE Alu -4 307 1 670 232 70 69 chr2 46350257 46350287 -206906296 - L1MC5 LINE L1 -264 7697 7669 1095 113 16 11 chr2 46350287 46350473 -206906110 - L1MA5A LINE L1 -3 6294 6108 670 232 70 69 chr2 46350473 46350766 -206905817 - L1MC5 LINE L1 -292 7669 7370 1261 189 45 36 chr2 46350998 46351315 -206905268 + L1MA8 LINE L1 5896 6227 -64 201 277 54 77 chr2 46352024 46352154 -206904429 - L2 LINE L2 -5 3308 3182 2195 109 0 7 chr2 46353035 46353338 -206903245 + AluSx SINE Alu 1 301 -11 2668 130 29 2 chr2 46353519 46353934 -206902649 - MSTB LTR MaLR 0 426 1 310 243 48 58 chr2 46355389 46355492 -206901091 - L2 LINE L2 -16 3256 3155 517 228 125 0 chr2 46355522 46355658 -206900925 - MIR SINE MIR -8 254 102 219 350 31 10 chr2 46355724 46355821 -206900762 + MIR3 SINE MIR 99 197 -11 245 343 55 0 chr2 46356152 46356225 -206900358 - L2 LINE L2 -25 3247 3171 958 273 34 43 chr2 46356311 46356663 -206899920 - L2 LINE L2 -14 3299 2951 206 252 41 114 chr2 46356765 46356822 -206899761 + L2 LINE L2 2836 2881 -433 1591 153 80 17 chr2 46356822 46357110 -206899473 - AluJo SINE Alu -6 306 1 206 252 41 114 chr2 46357110 46357175 -206899408 + L2 LINE L2 2881 2949 -365 * 521 342 46 27 chr2 46357167 46357535 -206899048 - L2 LINE L2 -624 2690 2316 189 288 96 48 chr2 46357654 46357779 -206898804 - L2 LINE L2 -250 3063 2933 510 292 150 17 chr2 46357821 46358167 -206898416 + L2 LINE L2 2343 2734 -580 192 231 0 0 chr2 46361347 46361399 -206895184 + (TATATG)n Simple_repeat Simple_repeat 5 56 0 652 255 96 21 chr2 46361812 46362051 -206894532 - L1MC5 LINE L1 -95 7866 7610 340 369 66 29 chr2 46362168 46362442 -206894141 + L2 LINE L2 998 1281 -2033 916 256 19 0 chr2 46362657 46362868 -206893715 + MIR SINE MIR 12 226 -36 2494 53 3 0 chr2 46362872 46363171 -206893412 + AluY SINE Alu 1 300 -11 1477 300 47 13 chr2 46363288 46363938 -206892645 - L2 LINE L2 -206 3107 2435 1249 192 32 80 chr2 46364167 46364216 -206892367 - L1ME2 LINE L1 -12 6221 6171 5399 132 15 7 chr2 46364216 46365567 -206891016 - L1PA16 LINE L1 -2 6164 4797 1249 192 32 80 chr2 46365567 46365929 -206890654 - L1ME2 LINE L1 -62 6171 5830 321 189 144 0 chr2 46365944 46366034 -206890549 + L1P LINE L1 5122 5224 -922 6776 208 28 73 chr2 46366041 46366214 -206890369 - L1ME2 LINE L1 -406 5827 5648 5783 34 3 0 chr2 46366214 46366898 -206889685 - L1PA4 LINE L1 -4 6151 5466 6776 208 28 73 chr2 46366898 46368345 -206888238 - L1ME2 LINE L1 -585 5648 4137 2041 128 77 6 chr2 46368345 46368682 -206887901 - MLT1A1 LTR MaLR -4 361 1 6776 208 28 73 chr2 46368682 46369580 -206887003 - L1ME2 LINE L1 -2096 4137 3420 2203 105 33 10 chr2 46369580 46369885 -206886698 - AluSx SINE Alu 0 312 1 6776 208 28 73 chr2 46369885 46369945 -206886638 - L1ME2 LINE L1 -2813 3420 3359 1039 191 0 6 chr2 46369953 46370126 -206886457 - AluJo SINE Alu -136 176 5 538 191 24 48 chr2 46370133 46370342 -206886241 - L1ME2 LINE L1 -2868 3347 3144 233 234 0 0 chr2 46370373 46370420 -206886163 - L1ME2 LINE L1 -3059 3156 3110 566 141 0 30 chr2 46370420 46370519 -206886064 - FLAM_A SINE Alu -3 139 44 2487 244 33 13 chr2 46370523 46371288 -206885295 - L1ME2 LINE L1 -3110 3105 2326 1067 165 0 16 chr2 46371308 46371490 -206885093 - AluJ SINE Alu -2 310 132 7918 50 2 0 chr2 46371490 46373235 -206883348 + L1PA3 LINE L1 4353 6100 -55 5777 30 0 0 chr2 46373335 46374037 -206882546 + L1PA3 LINE L1 5464 6165 0 673 200 23 0 chr2 46374087 46374217 -206882366 - AluJ SINE Alu -179 133 1 2031 236 65 24 chr2 46374222 46374977 -206881606 - L1ME2 LINE L1 -4044 2352 1567 21 0 0 0 chr2 46374984 46375005 -206881578 + AT_rich Low_complexity Low_complexity 1 21 0 456 241 33 48 chr2 46375015 46375207 -206881376 - L1MA7 LINE L1 -1 6290 6106 3328 81 2 9 chr2 46375207 46375653 -206880930 + MLT2A1 LTR ERVL 2 444 0 456 241 33 48 chr2 46375653 46375671 -206880912 - L1MA7 LINE L1 -185 6106 6089 * 1729 272 134 44 chr2 46375668 46377129 -206879454 - L1ME2 LINE L1 -4643 1586 18 446 327 146 42 chr2 46377163 46377493 -206879090 - L2 LINE L2 -6 3266 2903 253 373 8 32 chr2 46377516 46377544 -206879039 - L2 LINE L2 -2 3270 3243 793 254 6 0 chr2 46377544 46377709 -206878874 + FRAM SINE Alu 1 166 0 253 373 8 32 chr2 46377709 46377806 -206878777 - L2 LINE L2 -29 3243 3148 314 233 105 35 chr2 46377943 46378115 -206878468 - Charlie7 DNA MER1_type -3 2609 2426 * 384 219 42 0 chr2 46378090 46378186 -206878397 - Charlie7 DNA MER1_type -2507 105 6 31 26 0 0 chr2 46380176 46380214 -206876369 + AT_rich Low_complexity Low_complexity 1 38 0 2184 93 33 10 chr2 46380401 46380703 -206875880 + AluSc SINE Alu 1 309 0 962 224 53 29 chr2 46381986 46382231 -206874352 + MIR SINE MIR 1 251 -11 518 241 216 0 chr2 46383052 46383214 -206873369 + MIR SINE MIR 10 206 -56 226 246 15 15 chr2 46383256 46383321 -206873262 + (CTA)n Simple_repeat Simple_repeat 1 65 0 28 29 0 0 chr2 46384153 46384188 -206872395 + AT_rich Low_complexity Low_complexity 1 35 0 1883 171 0 0 chr2 46384188 46384474 -206872109 - AluJb SINE Alu -26 286 1 2163 106 7 0 chr2 46388155 46388439 -206868144 + AluSx SINE Alu 1 286 -26 922 68 26 0 chr2 46389631 46389748 -206866835 + AluY SINE Alu 1 120 -191 2393 175 58 25 chr2 46389748 46390238 -206866345 - Tigger6a DNA MER2_type -1066 531 22 2534 64 0 10 chr2 46390238 46390550 -206866033 + AluY SINE Alu 1 309 -2 2393 175 58 25 chr2 46390550 46390573 -206866010 - Tigger6a DNA MER2_type -1575 22 1 383 266 105 26 chr2 46390574 46390803 -206865780 + L1MC4a LINE L1 5687 5933 -1875 423 286 157 0 chr2 46391027 46391174 -206865409 + L3 LINE CR1 1170 1339 -238 369 304 74 16 chr2 46391215 46391362 -206865221 + MIR SINE MIR 21 170 -38 296 296 23 0 chr2 46391587 46391675 -206864908 + MIR SINE MIR 159 248 -14 339 373 26 63 chr2 46391880 46392183 -206864400 - L2 LINE L2 -1 3271 2980 230 235 176 0 chr2 46392466 46392534 -206864049 - MLT1L LTR MaLR -328 287 208 1474 201 92 18 chr2 46392662 46393055 -206863528 - MLT1C LTR MaLR 0 467 46 421 291 106 19 chr2 46393689 46393954 -206862629 + L1ME LINE L1 5531 5818 -303 1007 105 0 0 chr2 46394016 46394149 -206862434 + AluSq/x SINE Alu 1 133 -180 264 204 0 0 chr2 46394152 46394196 -206862387 + AluJ/monomer SINE Alu 246 289 -13 23 0 0 0 chr2 46394370 46394393 -206862190 + AT_rich Low_complexity Low_complexity 1 23 0 489 294 113 11 chr2 46396013 46396190 -206860393 - MIR3 SINE MIR -7 201 7 303 180 33 0 chr2 46396429 46396490 -206860093 + L2 LINE L2 3251 3313 0 308 237 69 23 chr2 46396959 46397090 -206859493 - L1ME4a LINE L1 -18 6103 5967 2040 147 0 7 chr2 46397123 46397429 -206859154 - AluSx SINE Alu -8 304 1 663 307 43 4 chr2 46397449 46397726 -206858857 - L1ME4a LINE L1 -236 5885 5598 21 36 0 0 chr2 46398960 46398988 -206857595 + AT_rich Low_complexity Low_complexity 1 28 0 1266 223 125 11 chr2 46400579 46401019 -206855564 + MER20B DNA MER1_type 282 771 -12 458 277 27 20 chr2 46401140 46401288 -206855295 + MIR SINE MIR 1 149 -113 207 0 0 0 chr2 46401690 46401713 -206854870 + (T)n Simple_repeat Simple_repeat 1 23 0 1756 177 3 20 chr2 46401754 46402053 -206854530 + AluJo SINE Alu 1 294 -18 825 149 0 8 chr2 46402062 46402196 -206854387 + FLAM_C SINE Alu 1 133 0 2243 163 65 37 chr2 46402513 46403022 -206853561 - Charlie1b DNA MER1_type 0 523 1 1628 153 35 4 chr2 46403230 46403485 -206853098 - AluJo SINE Alu -10 302 40 189 147 0 0 chr2 46403862 46403896 -206852687 + (TTTTA)n Simple_repeat Simple_repeat 3 36 0 1773 126 0 0 chr2 46403926 46404172 -206852411 - AluSx SINE Alu -6 306 61 852 278 106 47 chr2 46404716 46405123 -206851460 - L3 LINE CR1 -298 1279 849 1283 202 107 18 chr2 46405208 46405480 -206851103 - AluJo SINE Alu -16 296 1 1085 214 60 60 chr2 46405484 46405886 -206850697 - L1MC4 LINE L1 0 8042 7641 750 238 113 8 chr2 46406389 46406637 -206849946 - L2 LINE L2 0 3313 3040 468 304 101 22 chr2 46406759 46406986 -206849597 + MIR SINE MIR 8 252 -10 436 241 21 126 chr2 46407522 46407677 -206848906 - MER5B DNA MER1_type 0 178 45 2416 77 3 0 chr2 46407677 46407987 -206848596 - AluSq SINE Alu -2 311 1 436 241 21 126 chr2 46407987 46408022 -206848561 - MER5B DNA MER1_type -133 45 8 182 286 79 0 chr2 46408326 46408389 -206848194 + L2 LINE L2 3205 3272 0 2160 102 7 0 chr2 46409229 46409524 -206847059 - AluSg SINE Alu -13 297 1 2190 285 176 28 chr2 46409940 46411226 -206845357 + L2 LINE L2 360 1835 -1479 2120 147 0 3 chr2 46411387 46411699 -206844884 - AluSx SINE Alu -1 311 1 1296 259 71 19 chr2 46411774 46412249 -206844334 - L1ME3A LINE L1 -222 5948 5413 2216 131 0 0 chr2 46412249 46412554 -206844029 - AluJb SINE Alu -7 305 1 1296 259 71 19 chr2 46412554 46412822 -206843761 - L1ME3A LINE L1 -757 5413 5160 189 143 0 0 chr2 46412886 46412914 -206843669 - MER5A DNA MER1_type -35 154 127 819 146 8 0 chr2 46412914 46413037 -206843546 + FLAM_C SINE Alu 1 124 -9 1031 186 8 51 chr2 46413069 46413305 -206843278 + AluJo SINE Alu 85 310 -2 860 150 45 0 chr2 46413309 46413442 -206843141 - MER5A DNA MER1_type -50 139 1 474 228 135 16 chr2 46414063 46414256 -206842327 - MER20 DNA MER1_type -3 216 1 1740 190 0 10 chr2 46415760 46416071 -206840512 + AluJo SINE Alu 1 308 -4 561 99 0 0 chr2 46416072 46416153 -206840430 + (GGAA)n Simple_repeat Simple_repeat 4 84 0 452 285 139 13 chr2 46416928 46417079 -206839504 + L2 LINE L2 3102 3271 -1 246 279 13 13 chr2 46418042 46418121 -206838462 + CT-rich Low_complexity Low_complexity 2 80 0 266 253 62 144 chr2 46418139 46418265 -206838318 - MIR SINE MIR -6 256 150 2584 139 5 5 chr2 46418265 46418696 -206837887 - L1MB3 LINE L1 -2 6181 5751 266 253 62 144 chr2 46418696 46418763 -206837820 - MIR SINE MIR -112 150 79 262 298 113 52 chr2 46418819 46419165 -206837418 + L2 LINE L2 2148 2514 -800 456 213 53 107 chr2 46419224 46419480 -206837103 + MIR SINE MIR 9 262 0 1497 111 0 0 chr2 46420138 46420337 -206836246 + AluSq SINE Alu 97 295 -18 341 210 30 20 chr2 46420345 46420445 -206836138 - MER97a DNA MER1_type? -783 111 11 268 278 61 70 chr2 46425995 46426110 -206830473 + MIR3 SINE MIR 13 126 -82 2501 51 0 10 chr2 46426155 46426469 -206830114 + AluY SINE Alu 1 311 0 182 247 137 14 chr2 46427692 46427765 -206828818 - L2 LINE L2 -77 3236 3155 2522 71 0 0 chr2 46428728 46429036 -206827547 + AluY SINE Alu 1 308 -3 757 127 121 0 chr2 46429061 46429218 -206827365 + L1MD3 LINE L1 7818 7993 -2 344 297 186 7 chr2 46429913 46430058 -206826525 + L2 LINE L2 3102 3272 0 321 135 0 0 chr2 46431084 46431136 -206825447 + (TA)n Simple_repeat Simple_repeat 2 53 0 429 0 19 0 chr2 46431876 46431928 -206824655 + (TTTA)n Simple_repeat Simple_repeat 2 76 0 832 62 0 36 chr2 46431928 46432040 -206824543 - AluSg/x SINE Alu -29 283 176 432 276 105 33 chr2 46432883 46433035 -206823548 - MIR3 SINE MIR -9 199 37 527 317 95 5 chr2 46433069 46433290 -206823293 + MIR SINE MIR 13 253 -9 2225 116 0 0 chr2 46433310 46433602 -206822981 + AluSx SINE Alu 1 292 -20 322 214 116 18 chr2 46433663 46433775 -206822808 - MIR SINE MIR -75 187 65 458 296 7 15 chr2 46434289 46434424 -206822159 + MIR SINE MIR 2 135 -127 526 252 17 0 chr2 46434886 46435005 -206821578 - MIR SINE MIR -26 236 116 476 244 169 29 chr2 46434996 46435238 -206821345 + L2 LINE L2 3038 3313 0 * 268 256 128 0 chr2 46435228 46435314 -206821269 - MIR SINE MIR -130 132 36 * 517 299 8 0 chr2 46435356 46435490 -206821093 - MIR3 SINE MIR -30 178 44 1032 310 65 33 chr2 46435571 46436110 -206820473 + L2 LINE L2 2419 2974 -340 198 231 0 0 chr2 46436210 46436249 -206820334 + L2 LINE L2 3261 3299 -14 2021 129 38 0 chr2 46436907 46437194 -206819389 + AluJb SINE Alu 1 298 -14 853 99 0 0 chr2 46437782 46437903 -206818680 - L1PA15 LINE L1 -5 6160 6040 637 215 118 51 chr2 46438216 46438453 -206818130 + HAL1 LINE L1 47 299 -2208 419 208 0 0 chr2 46438455 46438532 -206818051 - MER2 DNA MER2_type -1 344 268 2331 112 0 0 chr2 46438554 46438858 -206817725 - AluSx SINE Alu -8 304 1 469 243 0 19 chr2 46438914 46439021 -206817562 - MER2 DNA MER2_type -240 105 1 881 227 115 29 chr2 46439021 46439299 -206817284 + HAL1 LINE L1 299 600 -1907 1272 213 81 27 chr2 46439325 46439808 -206816775 + HAL1 LINE L1 845 1353 -1154 2009 246 66 54 chr2 46439808 46440646 -206815937 + HAL1 LINE L1 1645 2492 -15 1214 194 79 11 chr2 46440720 46440999 -206815584 - L1MB8 LINE L1 -9 6169 5872 13580 93 40 90 chr2 46441001 46442207 -206814376 - Tigger1 DNA MER2_type 0 2418 1216 888 184 22 22 chr2 46442207 46442386 -206814197 - FAM SINE Alu -6 43 1 13580 93 40 90 chr2 46442386 46443545 -206813038 - Tigger1 DNA MER2_type -1202 1216 1 2399 135 41 11 chr2 46443547 46443984 -206812599 - L1MB8 LINE L1 -309 5869 5420 270 277 113 31 chr2 46443982 46444211 -206812372 + L1ME4a LINE L1 5432 5682 -439 * 258 57 0 0 chr2 46444239 46444274 -206812309 + MADE1 DNA Mariner 42 76 -4 270 249 123 62 chr2 46444285 46444610 -206811973 + L1ME4a LINE L1 5716 6060 -61 766 275 39 26 chr2 46445044 46445277 -206811306 - MIR SINE MIR -25 237 2 435 191 35 9 chr2 46445760 46445875 -206810708 - L1ME4a LINE L1 -2 6119 6002 2276 98 20 0 chr2 46446112 46446409 -206810174 + AluSg SINE Alu 1 303 -7 207 305 0 0 chr2 46447054 46447113 -206809470 + A-rich Low_complexity Low_complexity 1 59 0 220 333 0 0 chr2 46447862 46447928 -206808655 + CT-rich Low_complexity Low_complexity 2 67 0 225 0 0 0 chr2 46450826 46450851 -206805732 + (T)n Simple_repeat Simple_repeat 1 25 0 22 56 0 0 chr2 46452603 46452639 -206803944 + AT_rich Low_complexity Low_complexity 1 36 0 283 283 33 0 chr2 46453925 46453985 -206802598 - L2 LINE L2 -56 3216 3155 868 133 22 0 chr2 46454093 46454228 -206802355 - BC200 scRNA scRNA -60 140 3 392 296 193 16 chr2 46454348 46454569 -206802014 - MIR SINE MIR -1 261 5 33 56 0 0 chr2 46455049 46455103 -206801480 + AT_rich Low_complexity Low_complexity 1 54 0 21 0 0 0 chr2 46455679 46455700 -206800883 + AT_rich Low_complexity Low_complexity 1 21 0 2243 120 3 0 chr2 46457526 46457827 -206798756 + AluSx SINE Alu 1 302 -10 706 201 0 28 chr2 46458042 46458186 -206798397 - MIR SINE MIR 0 262 123 1060 173 4 56 chr2 46458285 46458516 -206798067 + MER20 DNA MER1_type 1 219 0 22 0 0 0 chr2 46460452 46460474 -206796109 + AT_rich Low_complexity Low_complexity 1 22 0 298 121 91 15 chr2 46460586 46460652 -206795931 - MER69 DNA AcHobo 0 2526 2456 815 144 36 0 chr2 46460658 46460797 -206795786 - MER69 DNA AcHobo -1082 144 1 216 227 40 53 chr2 46461576 46461651 -206794932 + MIR3 SINE MIR 109 182 -26 479 288 25 0 chr2 46462003 46462121 -206794462 - L2 LINE L2 -13 3300 3180 347 244 113 18 chr2 46463163 46463331 -206793252 - L1ME4a LINE L1 -307 5814 5631 417 314 107 22 chr2 46463665 46464114 -206792469 - L1ME4a LINE L1 -1897 4249 3763 2071 165 65 111 chr2 46464140 46464301 -206792282 - L1MB7 LINE L1 0 6184 6017 690 153 0 127 chr2 46464301 46464451 -206792132 + FLAM_C SINE Alu 1 131 -2 2071 165 65 111 chr2 46464451 46464985 -206791598 - L1MB7 LINE L1 -167 6017 5521 401 221 221 7 chr2 46465694 46465848 -206790735 - MER5A DNA MER1_type 0 189 3 1877 137 7 0 chr2 46465925 46466278 -206790305 + AluSg SINE Alu 2 356 0 1031 165 0 0 chr2 46466738 46466902 -206789681 + FAM SINE Alu 1 164 -11 236 264 77 137 chr2 46466960 46467142 -206789441 + MER5A DNA MER1_type 5 175 -14 325 242 98 45 chr2 46467531 46467663 -206788920 + MER20B DNA MER1_type 57 195 -588 342 0 0 0 chr2 46467757 46467795 -206788788 + (TG)n Simple_repeat Simple_repeat 2 39 0 256 375 38 68 chr2 46467933 46468301 -206788282 - L2 LINE L2 0 3272 2916 1513 135 56 8 chr2 46468453 46468719 -206787864 - L1PA16 LINE L1 0 6166 5888 9939 173 18 10 chr2 46468719 46470544 -206786039 - L1PA16 LINE L1 -488 5678 3838 1827 159 0 10 chr2 46470544 46470839 -206785744 - AluJb SINE Alu -20 292 1 9939 173 18 10 chr2 46470839 46471524 -206785059 - L1PA16 LINE L1 -2328 3838 3160 195 310 147 68 chr2 46471766 46472160 -206784423 - L2 LINE L2 -942 2372 1948 949 219 5 0 chr2 46472405 46472592 -206783991 + MER5A DNA MER1_type 1 188 -1 192 339 73 30 chr2 46472802 46472967 -206783616 + L2 LINE L2 2914 3085 -187 182 167 83 0 chr2 46473109 46473157 -206783426 + L2 LINE L2 2189 2240 -1074 2240 122 0 0 chr2 46473672 46473975 -206782608 + AluSx SINE Alu 1 303 -9 212 289 255 15 chr2 46474315 46474519 -206782064 - MIR SINE MIR -6 256 4 1926 163 0 20 chr2 46474561 46474867 -206781716 - AluJo SINE Alu -12 300 1 247 184 0 0 chr2 46475210 46475248 -206781335 - Alu SINE Alu -129 173 136 1995 191 23 36 chr2 46475252 46475806 -206780777 - L1M LINE L1 -737 5429 4874 1386 255 179 7 chr2 46475804 46476420 -206780163 - L1MEc LINE L1 -1638 4577 3856 * 5112 227 53 20 chr2 46476489 46477020 -206779563 - L1MEc LINE L1 -2804 3411 2899 2101 128 10 0 chr2 46477020 46477325 -206779258 - AluSx SINE Alu -4 308 1 5112 227 53 20 chr2 46477325 46478233 -206778350 - L1MEc LINE L1 -3316 2899 2022 1758 130 0 41 chr2 46478233 46478502 -206778081 + AluSq SINE Alu 1 258 -55 396 0 0 0 chr2 46478511 46478555 -206778028 + (CAAAA)n Simple_repeat Simple_repeat 3 46 0 5112 227 53 20 chr2 46478555 46479734 -206776849 - L1MEc LINE L1 -4200 2015 731 1420 213 0 4 chr2 46479738 46479996 -206776587 - AluJb SINE Alu -21 291 35 2707 220 46 22 chr2 46479998 46480352 -206776231 - L1MEc LINE L1 -5654 742 398 354 45 0 0 chr2 46480352 46480396 -206776187 + (TC)n Simple_repeat Simple_repeat 1 44 0 2707 220 46 22 chr2 46480396 46480461 -206776122 - L1MEc LINE L1 -5998 398 336 2259 118 7 0 chr2 46480461 46480767 -206775816 - AluSg SINE Alu -2 308 1 2707 220 46 22 chr2 46480767 46481038 -206775545 - L1MEc LINE L1 -6060 336 34 257 238 0 16 chr2 46481105 46481168 -206775415 - MIR SINE MIR 0 262 201 5213 234 163 23 chr2 46481172 46482738 -206773845 - L2 LINE L2 0 3313 1304 1983 142 3 7 chr2 46482738 46483040 -206773543 - AluJo SINE Alu -9 303 3 5213 234 163 23 chr2 46483040 46483557 -206773026 - L2 LINE L2 -2009 1304 861 663 237 225 0 chr2 46483594 46483843 -206772740 + MER5C DNA MER1_type 2 306 -18 202 190 103 0 chr2 46483862 46483920 -206772663 - L2 LINE L2 -2510 804 741 203 170 21 43 chr2 46483960 46484007 -206772576 + MER91B DNA MER1_type 23 68 -122 534 190 50 8 chr2 46484066 46484187 -206772396 - MIR SINE MIR -97 165 40 21 0 0 0 chr2 46487319 46487340 -206769243 + AT_rich Low_complexity Low_complexity 1 21 0 205 195 35 46 chr2 46488077 46488164 -206768419 + (CATATA)n Simple_repeat Simple_repeat 2 87 0 180 0 0 0 chr2 46488560 46488580 -206768003 + (CAGG)n Simple_repeat Simple_repeat 3 22 0 245 313 23 53 chr2 46490022 46490153 -206766430 - MIR3 SINE MIR -48 160 34 183 42 0 0 chr2 46490478 46490502 -206766081 + (TG)n Simple_repeat Simple_repeat 1 24 0 1964 66 0 21 chr2 46491198 46491441 -206765142 + AluY SINE Alu 1 238 -73 361 309 45 0 chr2 46492103 46492213 -206764370 + L2 LINE L2 3193 3307 -6 281 161 79 23 chr2 46492257 46492336 -206764247 - MIR SINE MIR -68 140 56 2027 147 0 20 chr2 46492754 46493060 -206763523 - AluSx SINE Alu -8 304 5 2940 47 12 0 chr2 46493254 46493629 -206762954 - L1P2 LINE L1 -540 5614 5236 877 165 0 0 chr2 46493936 46494143 -206762440 - FLAM_A SINE Alu 0 207 1 571 259 123 4 chr2 46494327 46494555 -206762028 - HAL1 LINE L1 -760 1747 1493 783 203 73 69 chr2 46494711 46494957 -206761626 + MIR SINE MIR 13 259 -3 2140 150 92 8 chr2 46495090 46495483 -206761100 - MSTB LTR MaLR 0 426 1 608 36 0 48 chr2 46495615 46495698 -206760885 - MADE1 DNA Mariner -1 79 1 820 156 231 91 chr2 46495958 46496278 -206760305 - MLT1A1 LTR MaLR 0 365 1 1388 181 91 50 chr2 46496513 46496811 -206759772 + AluJo SINE Alu 1 310 -2 2615 64 0 3 chr2 46499844 46500156 -206756427 + AluY SINE Alu 1 311 0 254 269 100 8 chr2 46500375 46500505 -206756078 + MIR SINE MIR 101 242 -20 281 235 227 9 chr2 46500741 46500857 -206755726 + MIR SINE MIR 17 148 -60 2183 101 3 36 chr2 46500951 46501258 -206755325 - AluSg SINE Alu -13 297 1 1844 146 18 0 chr2 46502531 46502806 -206753777 - AluJo SINE Alu -32 280 1 293 303 61 90 chr2 46503365 46503642 -206752941 - L2 LINE L2 -8 3264 2996 252 325 34 85 chr2 46503673 46503790 -206752793 - L2 LINE L2 -400 2914 2793 1831 76 0 4 chr2 46503790 46504015 -206752568 + AluY SINE Alu 76 299 -12 252 325 34 85 chr2 46504015 46504192 -206752391 - L2 LINE L2 -521 2793 2635 336 279 63 0 chr2 46504300 46504411 -206752172 - L2 LINE L2 -5 3308 3191 392 327 63 37 chr2 46505211 46505590 -206750993 - L2 LINE L2 -923 2391 2003 832 172 0 0 chr2 46505591 46505713 -206750870 + FLAM_C SINE Alu 1 122 -21 1293 32 0 6 chr2 46505895 46506053 -206750530 + L1PA4 LINE L1 5997 6153 -2 580 281 132 4 chr2 46506832 46507113 -206749470 - L2 LINE L2 -1 3312 2996 280 301 0 0 chr2 46507903 46507976 -206748607 + MIR3 SINE MIR 127 199 -9 2200 111 0 17 chr2 46508326 46508623 -206747960 + AluSx SINE Alu 1 292 -20 234 261 54 22 chr2 46508678 46508770 -206747813 + MIR SINE MIR 156 250 -12 25 0 0 0 chr2 46508902 46508927 -206747656 + AT_rich Low_complexity Low_complexity 1 25 0 198 0 0 0 chr2 46511726 46511748 -206744835 + (TA)n Simple_repeat Simple_repeat 2 23 0 22 0 0 0 chr2 46511748 46511770 -206744813 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr2 46512049 46512086 -206744497 + GC_rich Low_complexity Low_complexity 1 37 0 26 74 0 0 chr2 46514592 46514646 -206741937 + AT_rich Low_complexity Low_complexity 1 54 0 180 0 0 0 chr2 46519984 46520004 -206736579 + (T)n Simple_repeat Simple_repeat 1 20 0 252 0 0 0 chr2 46520130 46520158 -206736425 + (TG)n Simple_repeat Simple_repeat 1 28 0 534 241 96 59 chr2 46523534 46523754 -206732829 + MLT1H LTR MaLR 71 298 -251 557 193 47 53 chr2 46523922 46524112 -206732471 + MLT1H LTR MaLR 381 567 0 462 306 19 19 chr2 46524324 46524484 -206732099 + MIR3 SINE MIR 6 165 -43 15133 115 42 14 chr2 46524813 46526478 -206730105 + Tigger1 DNA MER2_type 30 1781 -637 2435 73 3 3 chr2 46526478 46526779 -206729804 + AluY SINE Alu 1 301 -10 15133 115 42 14 chr2 46526779 46527435 -206729148 + Tigger1 DNA MER2_type 1781 2417 -1 23 0 0 0 chr2 46527565 46527588 -206728995 + AT_rich Low_complexity Low_complexity 1 23 0 1715 194 0 0 chr2 46527590 46527878 -206728705 + AluSx SINE Alu 1 288 -24 295 321 146 21 chr2 46527882 46528464 -206728119 - L2 LINE L2 -153 3160 2500 1935 142 13 7 chr2 46529303 46529606 -206726977 + AluSp SINE Alu 1 305 -8 260 307 0 27 chr2 46529705 46529780 -206726803 - L2 LINE L2 -77 3195 3123 776 267 134 40 chr2 46530011 46530563 -206726020 - L2 LINE L2 0 3313 2814 2133 114 20 0 chr2 46530563 46530862 -206725721 - AluSg SINE Alu -3 307 3 2103 125 7 0 chr2 46530866 46531161 -206725422 - AluSx SINE Alu -15 297 1 776 267 134 40 chr2 46531161 46531258 -206725325 - L2 LINE L2 -501 2812 2590 215 217 0 0 chr2 46531871 46531917 -206724666 - MIR SINE MIR -73 135 90 2293 109 45 31 chr2 46534491 46534850 -206721733 - THE1B LTR MaLR 0 364 1 361 346 105 42 chr2 46534856 46535162 -206721421 - L2 LINE L2 0 3272 2948 609 152 0 10 chr2 46535299 46535398 -206721185 + AluSg/x SINE Alu 118 215 -97 307 322 41 76 chr2 46535581 46535752 -206720831 + HAL1 LINE L1 9 173 -2334 740 227 0 0 chr2 46536020 46536152 -206720431 + FLAM_A SINE Alu 6 137 -5 306 236 142 4 chr2 46536241 46536466 -206720117 + HAL1 LINE L1 1031 1286 -1221 1051 264 162 7 chr2 46536506 46536968 -206719615 + HAL1 LINE L1 1368 1901 -606 799 168 0 0 chr2 46537040 46537159 -206719424 + FLAM_A SINE Alu 1 119 -14 1079 72 0 20 chr2 46537262 46537414 -206719169 + L1PA5 LINE L1 6005 6153 -1 393 168 137 32 chr2 46537805 46537900 -206718683 - MER53 DNA DNA -84 105 1 2248 85 3 0 chr2 46537937 46538231 -206718352 + AluSp SINE Alu 1 295 -18 1946 130 3 3 chr2 46538791 46539090 -206717493 + AluSx SINE Alu 1 299 -13 197 343 29 0 chr2 46539875 46539945 -206716638 - L2 LINE L2 -1 3312 3241 381 275 186 52 chr2 46541016 46541209 -206715374 - MIR SINE MIR -13 249 31 355 304 78 0 chr2 46541265 46541367 -206715216 + MIR SINE MIR 34 143 -65 770 266 118 21 chr2 46541410 46541647 -206714936 + MIR SINE MIR 2 261 -1 2168 98 3 3 chr2 46541697 46541992 -206714591 - AluSx SINE Alu -17 295 1 183 349 31 44 chr2 46542228 46542404 -206714179 - MIR SINE MIR -69 193 20 217 322 0 23 chr2 46542621 46542708 -206713875 + MIR SINE MIR 19 103 -105 185 0 0 39 chr2 46542828 46542854 -206713729 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 198 0 0 0 chr2 46543507 46543529 -206713054 + (A)n Simple_repeat Simple_repeat 1 22 0 306 0 0 0 chr2 46545494 46545528 -206711055 + (T)n Simple_repeat Simple_repeat 1 34 0 27 29 0 0 chr2 46550239 46550273 -206706310 + AT_rich Low_complexity Low_complexity 1 34 0 532 114 0 0 chr2 46550372 46550460 -206706123 - L1MB5 LINE L1 0 6174 6087 236 246 0 18 chr2 46550541 46550598 -206705985 - L2 LINE L2 -4 3268 3213 246 105 0 0 chr2 46551282 46551320 -206705263 + (ATG)n Simple_repeat Simple_repeat 1 38 0 486 261 62 8 chr2 46551552 46551682 -206704901 + MIR SINE MIR 50 186 -76 2274 73 3 7 chr2 46552662 46552964 -206703619 - AluSp SINE Alu -10 303 3 2387 145 43 48 chr2 46553788 46553950 -206702633 - L1MB4 LINE L1 -144 6036 5592 1653 191 0 0 chr2 46553950 46554233 -206702350 - AluJb SINE Alu -29 283 1 792 266 54 30 chr2 46554236 46554570 -206702013 - L1PB1 LINE L1 -268 5883 5542 344 241 25 38 chr2 46554604 46554726 -206701857 - MIR SINE MIR -68 140 71 360 373 100 7 chr2 46554834 46554984 -206701599 + L2 LINE L2 3109 3272 0 903 114 138 12 chr2 46555128 46555295 -206701288 - MER53 DNA DNA -1 188 1 2149 108 3 0 chr2 46558191 46558497 -206698086 - AluSx SINE Alu -4 308 2 745 221 81 0 chr2 46559705 46559877 -206696706 - MER53 DNA DNA -3 186 1 220 296 11 23 chr2 46559966 46560054 -206696529 + CT-rich Low_complexity Low_complexity 1 87 0 397 381 40 6 chr2 46560054 46560227 -206696356 + MIR SINE MIR 20 198 -64 446 213 75 30 chr2 46560803 46560931 -206695652 - MIR SINE MIR -25 237 113 3700 101 17 46 chr2 46561059 46561602 -206694981 - MER1A DNA MER1_type 0 527 1 275 234 16 133 chr2 46561897 46562025 -206694558 - MIR SINE MIR -136 126 14 2225 110 0 0 chr2 46562288 46562588 -206693995 + AluSq SINE Alu 1 300 -13 277 337 97 74 chr2 46563001 46563351 -206693232 + L2 LINE L2 2910 3267 -5 484 229 159 35 chr2 46564304 46564505 -206692078 + MLT1I LTR MaLR 10 235 -174 1420 101 41 27 chr2 46564507 46564726 -206691857 - MER30 DNA MER1_type -2 228 7 455 216 108 29 chr2 46564746 46564885 -206691698 + MLT1I LTR MaLR 260 409 0 497 276 238 0 chr2 46565261 46565446 -206691137 - MIR SINE MIR -21 241 13 245 350 45 45 chr2 46565674 46565831 -206690752 - L3b LINE CR1 -186 1397 1241 2085 116 0 28 chr2 46565897 46566215 -206690368 + AluSq SINE Alu 1 309 -4 1882 140 7 10 chr2 46566701 46567008 -206689575 - AluJb SINE Alu -6 306 1 436 267 185 0 chr2 46568182 46568328 -206688255 + MIR SINE MIR 21 193 -69 2521 172 30 55 chr2 46569168 46569698 -206686885 - Charlie1b DNA MER1_type -6 517 1 198 188 0 0 chr2 46570124 46570156 -206686427 + MIR SINE MIR 119 150 -112 338 294 35 0 chr2 46570208 46570293 -206686290 - MIR3 SINE MIR -44 164 77 2078 120 0 13 chr2 46570325 46570634 -206685949 - AluSx SINE Alu -7 305 1 1601 179 35 0 chr2 46570660 46570950 -206685633 + AluJb SINE Alu 13 312 0 273 173 19 19 chr2 46570975 46571027 -206685556 + MIR3 SINE MIR 135 186 -22 656 320 62 18 chr2 46572398 46572851 -206683732 + L1ME4a LINE L1 5510 5982 -139 1270 150 162 0 chr2 46573720 46573986 -206682597 + AluYa8 SINE Alu 1 309 -1 1753 146 56 0 chr2 46574837 46574946 -206681637 + AluSx SINE Alu 6 107 -205 321 26 0 0 chr2 46574946 46574984 -206681599 + (TAA)n Simple_repeat Simple_repeat 2 39 0 1753 146 56 0 chr2 46574984 46575161 -206681422 + AluSx SINE Alu 107 308 -4 211 320 10 20 chr2 46575787 46575887 -206680696 + GA-rich Low_complexity Low_complexity 5 103 0 1550 196 21 0 chr2 46576597 46576883 -206679700 + MER82 DNA MER2_type 2 293 -360 360 359 85 49 chr2 46576968 46577333 -206679250 + L2 LINE L2 2891 3268 -4 1503 150 0 40 chr2 46578073 46578346 -206678237 + AluJb SINE Alu 35 296 -16 205 295 74 42 chr2 46579283 46579378 -206677205 + MIR3 SINE MIR 13 110 -98 1576 299 54 19 chr2 46579426 46579786 -206676797 + L2 LINE L2 1169 1515 -1799 582 228 0 0 chr2 46579786 46579900 -206676683 + MER81 DNA DNA 1 114 0 1576 299 54 19 chr2 46579900 46580059 -206676524 + L2 LINE L2 1515 1714 -1600 1526 142 0 4 chr2 46580059 46580306 -206676277 + AluJb SINE Alu 54 299 -13 1576 299 54 19 chr2 46580306 46580373 -206676210 + L2 LINE L2 1714 1777 -1537 294 354 56 0 chr2 46580530 46580674 -206675909 + L2 LINE L2 3160 3311 -2 2244 85 13 6 chr2 46581145 46581462 -206675121 - L1PA8 LINE L1 0 6172 5854 186 222 0 67 chr2 46586381 46586426 -206670157 - L2 LINE L2 -263 3050 3009 1819 93 4 8 chr2 46586487 46586724 -206669859 - AluSx SINE Alu -70 242 7 392 236 120 41 chr2 46586732 46586999 -206669584 - L1MEc LINE L1 -2733 3482 3195 331 224 54 61 chr2 46587011 46587158 -206669425 - L1MEc LINE L1 -3660 2555 2410 416 284 95 60 chr2 46587160 46587477 -206669106 - L1MEc LINE L1 -3966 2430 2103 38 22 0 0 chr2 46587513 46587558 -206669025 + AT_rich Low_complexity Low_complexity 1 45 0 507 275 80 52 chr2 46587803 46588101 -206668482 - L1ME3 LINE L1 -205 5957 5644 1937 172 0 6 chr2 46588101 46588415 -206668168 + AluJb SINE Alu 1 312 0 507 275 80 52 chr2 46588415 46588516 -206668067 - L1ME3 LINE L1 -518 5644 5547 342 313 106 6 chr2 46588808 46588987 -206667596 + LTR67 LTR ERVL 359 555 -2 441 298 37 35 chr2 46589392 46589612 -206666971 - L1ME3A LINE L1 -11 6159 5934 901 300 94 29 chr2 46589646 46590255 -206666328 - L1ME3A LINE L1 -208 5962 5336 835 148 0 15 chr2 46590304 46590439 -206666144 + FLAM_C SINE Alu 11 143 0 254 275 106 54 chr2 46590447 46591062 -206665521 - L1ME3A LINE L1 -892 5254 4481 2008 148 0 3 chr2 46591388 46591686 -206664897 - AluSx SINE Alu -15 297 1 2037 146 0 3 chr2 46593004 46593299 -206663284 - AluJb SINE Alu -18 294 1 198 0 0 0 chr2 46593410 46593432 -206663151 + (TC)n Simple_repeat Simple_repeat 1 22 0 670 200 23 0 chr2 46594128 46594303 -206662280 + GA-rich Low_complexity Low_complexity 2 180 0 821 229 49 31 chr2 46594321 46594544 -206662039 - MIR SINE MIR -28 234 8 434 240 48 91 chr2 46594603 46594646 -206661937 - MLT1L LTR MaLR -12 603 560 2147 134 18 6 chr2 46594646 46594989 -206661594 + L1MB3 LINE L1 5830 6176 -7 434 240 48 91 chr2 46594989 46595153 -206661430 - MLT1L LTR MaLR -55 560 405 243 133 17 67 chr2 46595248 46595308 -206661275 + MLT1A1 LTR MaLR 1 57 -308 1313 149 58 42 chr2 46595315 46595415 -206661168 + AluJo SINE Alu 13 110 -202 1979 132 0 10 chr2 46595415 46595710 -206660873 - AluSx SINE Alu -20 292 1 1313 149 58 42 chr2 46595710 46595850 -206660733 + AluJo SINE Alu 110 257 -55 1327 140 215 0 chr2 46595881 46596146 -206660437 + MLT1A1 LTR MaLR 44 365 0 498 234 128 66 chr2 46596161 46596388 -206660195 - MLT1L LTR MaLR -336 279 39 324 0 0 0 chr2 46596746 46596782 -206659801 + (CA)n Simple_repeat Simple_repeat 2 37 0 209 344 31 37 chr2 46596784 46596947 -206659636 + MIR SINE MIR 1 162 -100 201 316 134 28 chr2 46596967 46597220 -206659363 + L2 LINE L2 2455 2734 -580 193 352 38 38 chr2 46597577 46597682 -206658901 + L2 LINE L2 3160 3264 -8 1097 33 8 0 chr2 46598157 46598309 -206658274 + L1PA3 LINE L1 6015 6167 0 205 343 0 0 chr2 46598584 46598657 -206657926 - MER5A DNA MER1_type -57 132 60 348 326 99 63 chr2 46598881 46599246 -206657337 + L2 LINE L2 2891 3268 -4 1575 151 0 41 chr2 46599986 46600257 -206656326 + AluJb SINE Alu 35 294 -18 201 295 74 42 chr2 46601193 46601288 -206655295 + MIR3 SINE MIR 13 110 -98 1493 284 61 25 chr2 46601336 46601696 -206654887 + L2 LINE L2 1169 1515 -1799 614 228 0 0 chr2 46601696 46601810 -206654773 + MER81 DNA DNA 1 114 0 1493 284 61 25 chr2 46601810 46601969 -206654614 + L2 LINE L2 1515 1714 -1600 1600 142 0 4 chr2 46601969 46602216 -206654367 + AluJb SINE Alu 54 299 -13 1493 284 61 25 chr2 46602216 46602283 -206654300 + L2 LINE L2 1714 1777 -1537 264 319 76 21 chr2 46602440 46602584 -206653999 + L2 LINE L2 3160 3311 -2 2352 85 13 6 chr2 46603055 46603372 -206653211 - L1PA8 LINE L1 0 6172 5854 186 222 0 67 chr2 46608292 46608337 -206648246 - L2 LINE L2 -263 3050 3009 305 279 194 25 chr2 46608343 46608398 -206648185 - MIR SINE MIR 0 262 218 1884 70 0 8 chr2 46608398 46608641 -206647942 - AluY SINE Alu -70 241 1 305 279 194 25 chr2 46608641 46608786 -206647797 - MIR SINE MIR -44 218 28 201 316 134 28 chr2 46608982 46609235 -206647348 - L2 LINE L2 -580 2734 2455 245 337 31 37 chr2 46609255 46609418 -206647165 - MIR SINE MIR -100 162 1 324 0 0 0 chr2 46609420 46609456 -206647127 + (TG)n Simple_repeat Simple_repeat 2 37 0 498 234 128 66 chr2 46609814 46610041 -206646542 + MLT1L LTR MaLR 39 279 -336 1327 140 215 0 chr2 46610056 46610321 -206646262 - MLT1A1 LTR MaLR 0 365 44 1313 149 58 42 chr2 46610352 46610492 -206646091 - AluJo SINE Alu -55 257 110 1979 132 0 10 chr2 46610492 46610787 -206645796 + AluSx SINE Alu 1 292 -20 1313 149 58 42 chr2 46610787 46610887 -206645696 - AluJo SINE Alu -202 110 13 243 133 17 67 chr2 46610894 46610954 -206645629 - MLT1A1 LTR MaLR -308 57 1 434 240 48 91 chr2 46611049 46611213 -206645370 + MLT1L LTR MaLR 405 560 -55 2147 134 18 6 chr2 46611213 46611556 -206645027 - L1MB3 LINE L1 -7 6176 5830 434 240 48 91 chr2 46611556 46611599 -206644984 + MLT1L LTR MaLR 560 603 -12 821 229 49 31 chr2 46611658 46611881 -206644702 + MIR SINE MIR 8 234 -28 670 200 23 0 chr2 46611899 46612074 -206644509 + CT-rich Low_complexity Low_complexity 2 180 0 198 0 0 0 chr2 46612770 46612792 -206643791 + (GA)n Simple_repeat Simple_repeat 1 22 0 2037 146 0 3 chr2 46612903 46613198 -206643385 + AluJb SINE Alu 1 294 -18 2008 148 0 3 chr2 46614516 46614814 -206641769 + AluSx SINE Alu 1 297 -15 254 275 106 54 chr2 46615140 46615755 -206640828 + L1ME3A LINE L1 4481 5254 -892 835 148 0 15 chr2 46615763 46615898 -206640685 - FLAM_C SINE Alu 0 143 11 901 300 94 29 chr2 46615947 46616556 -206640027 + L1ME3A LINE L1 5336 5962 -208 441 298 37 35 chr2 46616590 46616810 -206639773 + L1ME3A LINE L1 5934 6159 -11 342 313 106 6 chr2 46617215 46617394 -206639189 - LTR67 LTR ERVL -2 555 359 507 275 80 52 chr2 46617686 46617787 -206638796 + L1ME3 LINE L1 5547 5644 -518 1937 172 0 6 chr2 46617787 46618101 -206638482 - AluJb SINE Alu 0 312 1 507 275 80 52 chr2 46618101 46618399 -206638184 + L1ME3 LINE L1 5644 5957 -205 38 22 0 0 chr2 46618644 46618689 -206637894 + AT_rich Low_complexity Low_complexity 1 45 0 416 284 95 60 chr2 46618725 46619042 -206637541 + L1ME3A LINE L1 2103 2430 -3966 331 224 54 61 chr2 46619044 46619191 -206637392 + L1ME3A LINE L1 2410 2555 -3660 989 263 152 53 chr2 46619203 46619478 -206637105 + L1ME3A LINE L1 3195 3442 -2773 2268 93 3 10 chr2 46619478 46619778 -206636805 + AluSx SINE Alu 7 304 -8 989 263 152 53 chr2 46619778 46620327 -206636256 + L1ME3A LINE L1 3442 4138 -2077 2151 116 0 16 chr2 46620327 46620630 -206635953 - AluSx SINE Alu -14 298 1 989 263 152 53 chr2 46620630 46620814 -206635769 + L1ME3A LINE L1 4138 4303 -1912 1281 113 0 6 chr2 46620814 46620991 -206635592 + AluSg/x SINE Alu 122 297 -15 222 37 0 0 chr2 46621154 46621181 -206635402 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 228 287 115 0 chr2 46621192 46621279 -206635304 + L1ME3A LINE L1 4327 4423 -1792 1986 153 64 0 chr2 46621732 46622058 -206634525 + MER7A DNA MER2_type 2 346 0 1311 214 17 17 chr2 46622401 46622690 -206633893 + L1MB7 LINE L1 5887 6175 -9 625 274 27 34 chr2 46622746 46623038 -206633545 + L1ME3A LINE L1 4809 5098 -1117 * 6991 165 40 53 chr2 46623023 46624481 -206632102 + L1MC1 LINE L1 2 1441 -4985 2910 103 15 10 chr2 46624483 46624890 -206631693 + MSTA LTR MaLR 3 411 -17 12229 190 59 22 chr2 46624896 46626832 -206629751 + L1MC1 LINE L1 1437 3300 -3313 462 111 0 0 chr2 46626832 46626895 -206629688 + Alu SINE Alu 239 301 -11 12229 190 59 22 chr2 46626895 46628522 -206628061 + L1MC1 LINE L1 3300 4865 -1748 243 0 0 0 chr2 46628522 46628549 -206628034 + (TAA)n Simple_repeat Simple_repeat 1 27 0 12229 190 59 22 chr2 46628549 46629913 -206626670 + L1MC1 LINE L1 4865 6613 0 24 67 0 0 chr2 46629927 46629972 -206626611 + AT_rich Low_complexity Low_complexity 1 45 0 233 167 0 0 chr2 46629994 46630036 -206626547 - 5S rRNA rRNA -79 42 1 288 0 0 0 chr2 46630056 46630088 -206626495 + (CA)n Simple_repeat Simple_repeat 2 33 0 285 283 46 17 chr2 46630118 46630291 -206626292 + L1ME3A LINE L1 5191 5368 -847 1097 278 56 54 chr2 46630298 46630891 -206625692 + L1ME3A LINE L1 5416 6009 -230 1287 263 82 20 chr2 46630959 46631400 -206625183 - MLT1L LTR MaLR -2 613 146 414 0 0 0 chr2 46631796 46631842 -206624741 + (CA)n Simple_repeat Simple_repeat 1 46 0 186 43 0 0 chr2 46633361 46633384 -206623199 + (CA)n Simple_repeat Simple_repeat 2 24 0 246 32 0 0 chr2 46635564 46635595 -206620988 + (TC)n Simple_repeat Simple_repeat 2 32 0 * 267 31 0 0 chr2 46635594 46635626 -206620957 + (TG)n Simple_repeat Simple_repeat 1 32 0 2080 131 3 10 chr2 46635783 46636089 -206620494 + AluJb SINE Alu 9 312 0 21 57 0 0 chr2 46636185 46636220 -206620363 + AT_rich Low_complexity Low_complexity 1 35 0 189 0 0 0 chr2 46636565 46636586 -206619997 + (TG)n Simple_repeat Simple_repeat 2 22 0 182 330 42 8 chr2 46637198 46637316 -206619267 - L3b LINE CR1 -360 1223 1102 626 242 141 5 chr2 46637366 46637564 -206619019 + MIR SINE MIR 29 253 -9 2304 76 3 3 chr2 46637566 46637867 -206618716 - AluSp SINE Alu -12 301 1 213 167 0 42 chr2 46638549 46638597 -206617986 + T-rich Low_complexity Low_complexity 3 48 0 187 213 43 0 chr2 46638669 46638716 -206617867 - L2 LINE L2 0 3272 3224 1782 153 3 19 chr2 46638936 46639243 -206617340 + AluJo SINE Alu 1 302 -10 2529 225 86 56 chr2 46639844 46640783 -206615800 + HAL1 LINE L1 1536 2502 -5 497 197 237 0 chr2 46642091 46642243 -206614340 + MIR SINE MIR 4 191 -71 351 305 50 21 chr2 46643476 46643617 -206612966 + MIR SINE MIR 83 227 -35 23 0 0 0 chr2 46644623 46644646 -206611937 + AT_rich Low_complexity Low_complexity 1 23 0 757 252 68 13 chr2 46646099 46646333 -206610250 + MIR SINE MIR 12 258 -4 745 226 29 54 chr2 46646961 46647165 -206609418 - MIR SINE MIR -16 246 48 244 287 58 35 chr2 46647881 46647968 -206608615 - MIR3 SINE MIR -1 207 119 213 227 30 61 chr2 46647985 46648051 -206608532 + L2 LINE L2 3232 3295 -18 247 306 5 29 chr2 46648654 46648786 -206607797 + CT-rich Low_complexity Low_complexity 1 128 0 430 325 38 0 chr2 46649409 46649566 -206607017 - MIR SINE MIR 0 262 100 340 339 29 12 chr2 46651082 46651253 -206605330 + MER117 DNA MER1_type 1 174 -23 284 232 29 0 chr2 46651261 46651330 -206605253 + L2 LINE L2 2991 3061 -211 782 291 19 34 chr2 46651330 46651595 -206604988 + MIR SINE MIR 2 262 0 312 190 165 13 chr2 46651703 46651782 -206604801 + L2 LINE L2 3182 3272 0 220 326 0 12 chr2 46651963 46652049 -206604534 + GA-rich Low_complexity Low_complexity 1 85 0 478 321 80 5 chr2 46652270 46652482 -206604101 + MIR SINE MIR 32 259 -3 181 242 45 30 chr2 46652611 46652677 -206603906 - L2 LINE L2 -6 3307 3241 350 250 26 83 chr2 46652860 46653016 -206603567 + MIR SINE MIR 26 172 -90 1322 222 103 21 chr2 46653912 46654299 -206602284 - L1ME3 LINE L1 -129 6033 5605 338 219 0 14 chr2 46655140 46655213 -206601370 - MIR SINE MIR -114 148 77 1258 100 7 7 chr2 46655213 46655477 -206601106 - THE1C LTR MaLR 0 364 3 10476 94 25 61 chr2 46655479 46657118 -206599465 - THE1C-int LTR MaLR 0 1580 1 2844 94 3 0 chr2 46657118 46657492 -206599091 - THE1C LTR MaLR 0 375 1 399 226 24 12 chr2 46657681 46657765 -206598818 - MIR SINE MIR -173 89 5 1947 111 7 39 chr2 46658746 46659052 -206597531 + AluSq SINE Alu 3 298 -15 214 282 14 0 chr2 46659151 46659222 -206597361 + (TATTG)n Simple_repeat Simple_repeat 2 73 0 500 282 80 70 chr2 46659597 46659933 -206596650 - MLT1L LTR MaLR -19 570 229 682 262 162 9 chr2 46659944 46660154 -206596429 + MIR SINE MIR 21 262 0 2212 91 3 0 chr2 46660320 46660617 -206595966 - AluY SINE Alu -12 299 2 421 314 41 0 chr2 46661245 46661366 -206595217 - MIR SINE MIR -31 231 106 1972 99 7 11 chr2 46662191 46662516 -206594067 + AluSx SINE Alu 1 324 0 248 200 56 56 chr2 46662556 46662646 -206593937 + MLT1L LTR MaLR 526 615 0 1993 104 4 0 chr2 46662800 46663078 -206593505 + AluSx SINE Alu 33 311 -1 1246 128 52 28 chr2 46666783 46666994 -206589589 - MER51A LTR ERV1 0 634 419 835 193 71 14 chr2 46666990 46667202 -206589381 - MER51A LTR ERV1 -410 224 1 * 432 231 0 0 chr2 46667643 46667721 -206588862 + MER81 DNA DNA 1 78 -36 746 283 0 0 chr2 46667863 46668036 -206588547 + MER5B DNA MER1_type 6 178 0 2207 79 13 10 chr2 46668170 46668473 -206588110 - AluY SINE Alu -7 304 1 234 250 0 31 chr2 46669022 46669086 -206587497 + MIR SINE MIR 95 156 -106 2213 103 0 0 chr2 46669550 46669851 -206586732 + AluSx SINE Alu 1 301 -11 1830 175 0 0 chr2 46670322 46670630 -206585953 + AluJb SINE Alu 1 308 -4 195 129 0 0 chr2 46670640 46670671 -206585912 + (GAAAA)n Simple_repeat Simple_repeat 4 34 0 344 237 165 0 chr2 46670672 46670769 -206585814 + L2 LINE L2 3193 3305 -8 227 324 28 9 chr2 46670874 46670982 -206585601 + MIR SINE MIR 112 221 -41 1976 125 0 29 chr2 46671513 46671824 -206584759 - AluSx SINE Alu -10 302 1 258 259 140 25 chr2 46671911 46672076 -206584507 - MIR SINE MIR -62 200 21 1942 96 0 0 chr2 46672485 46672746 -206583837 + AluSg SINE Alu 37 297 -13 307 274 161 16 chr2 46672747 46672871 -206583712 - MIR SINE MIR -55 207 66 233 315 36 52 chr2 46672873 46673124 -206583459 + L1MEd LINE L1 344 590 -5782 1625 175 0 4 chr2 46673129 46673409 -206583174 + AluJo SINE Alu 1 279 -33 2159 107 0 3 chr2 46673410 46673710 -206582873 + AluSq SINE Alu 1 299 -14 35 0 0 0 chr2 46673724 46673759 -206582824 + AT_rich Low_complexity Low_complexity 1 35 0 1321 238 73 124 chr2 46673759 46674294 -206582289 + L1MEd LINE L1 582 1131 -5241 538 92 26 0 chr2 46674294 46674370 -206582213 + BC200 scRNA scRNA 2 79 -121 1321 238 73 124 chr2 46674370 46674676 -206581907 + L1MEd LINE L1 1131 1451 -4921 1902 149 155 13 chr2 46675041 46675416 -206581167 - MSTA LTR MaLR 0 428 1 570 271 11 70 chr2 46675582 46675655 -206580928 + L1MEd LINE L1 1414 1490 -5006 1959 146 0 0 chr2 46675655 46675949 -206580634 + AluSx SINE Alu 1 294 -18 570 271 11 70 chr2 46675949 46676142 -206580441 + L1MEd LINE L1 1490 1794 -4702 365 222 94 8 chr2 46676161 46676278 -206580305 + L1MEd LINE L1 3142 3268 -3114 233 279 0 58 chr2 46676951 46677037 -206579546 + MIR SINE MIR 48 128 -80 1795 140 3 22 chr2 46677114 46677429 -206579154 + AluSx SINE Alu 3 311 -1 524 337 12 6 chr2 46677717 46677889 -206578694 + MER5B DNA MER1_type 2 174 -4 543 304 143 0 chr2 46678174 46678391 -206578192 - MIR SINE MIR -6 256 9 443 188 51 86 chr2 46679047 46679092 -206577491 - MIR3 SINE MIR -11 197 152 1030 143 80 0 chr2 46679092 46679267 -206577316 + MER5A DNA MER1_type 1 189 0 443 188 51 86 chr2 46679267 46679338 -206577245 - MIR3 SINE MIR -56 152 85 * 447 246 51 25 chr2 46679316 46679434 -206577149 + L2 LINE L2 3193 3313 0 485 92 13 0 chr2 46679933 46680009 -206576574 + (GA)n Simple_repeat Simple_repeat 1 77 0 1112 250 104 25 chr2 46680774 46681178 -206575405 - L2 LINE L2 -5 3308 2873 219 232 13 119 chr2 46681189 46681340 -206575243 - L2 LINE L2 -1477 1837 1703 2070 114 7 0 chr2 46681371 46681668 -206574915 - AluSp SINE Alu -14 299 1 1886 273 228 41 chr2 46681954 46683039 -206573544 + L2 LINE L2 102 1476 -1838 2257 98 3 0 chr2 46683039 46683344 -206573239 + AluSx SINE Alu 1 306 -6 1886 273 228 41 chr2 46683344 46683570 -206573013 + L2 LINE L2 1476 1658 -1656 879 238 52 24 chr2 46683592 46683802 -206572781 - MER58A DNA MER1_type 0 224 9 1373 152 4 4 chr2 46683873 46684103 -206572480 + AluJo SINE Alu 1 230 -82 379 118 24 0 chr2 46684469 46684554 -206572029 + (TG)n Simple_repeat Simple_repeat 1 87 0 1203 163 47 1 chr2 46685670 46685988 -206570595 - MLT1A1 LTR MaLR 0 365 2 216 97 0 0 chr2 46686332 46686363 -206570220 + (T)n Simple_repeat Simple_repeat 1 31 0 234 0 0 0 chr2 46686557 46686583 -206570000 + (TAA)n Simple_repeat Simple_repeat 2 27 0 237 65 0 0 chr2 46687893 46687924 -206568659 + (CACG)n Simple_repeat Simple_repeat 1 31 0 229 330 0 11 chr2 46698278 46698369 -206558214 + GA-rich Low_complexity Low_complexity 2 91 0 219 184 0 20 chr2 46698823 46698872 -206557711 + (CCCTA)n Simple_repeat Simple_repeat 3 50 0 252 231 0 31 chr2 46703514 46703579 -206553004 + C-rich Low_complexity Low_complexity 4 66 0 228 221 44 0 chr2 46705491 46705559 -206551024 + GA-rich Low_complexity Low_complexity 2 72 0 221 0 0 33 chr2 46705871 46705901 -206550682 + (TCTCCC)n Simple_repeat Simple_repeat 3 31 0 223 192 19 0 chr2 46705955 46706007 -206550576 + (TG)n Simple_repeat Simple_repeat 2 54 0 426 242 0 0 chr2 46706019 46706143 -206550440 + CT-rich Low_complexity Low_complexity 3 126 0 333 212 0 0 chr2 46706267 46706380 -206550203 + (CGG)n Simple_repeat Simple_repeat 3 115 0 210 284 49 0 chr2 46707716 46707797 -206548786 + GA-rich Low_complexity Low_complexity 1 85 0 389 159 0 23 chr2 46708838 46708926 -206547657 + CT-rich Low_complexity Low_complexity 1 86 0 225 0 0 0 chr2 46709375 46709400 -206547183 + (A)n Simple_repeat Simple_repeat 1 25 0 246 192 0 0 chr2 46709471 46709523 -206547060 + CT-rich Low_complexity Low_complexity 2 53 0 22 35 0 0 chr2 46709680 46709709 -206546874 + AT_rich Low_complexity Low_complexity 1 29 0 218 136 23 0 chr2 46709795 46709839 -206546744 + CT-rich Low_complexity Low_complexity 1 45 0 360 0 0 0 chr2 46714211 46714251 -206542332 + (CA)n Simple_repeat Simple_repeat 2 41 0 408 20 0 0 chr2 46714913 46714962 -206541621 + (CA)n Simple_repeat Simple_repeat 1 49 0 222 264 0 28 chr2 46715159 46715231 -206541352 + GA-rich Low_complexity Low_complexity 3 72 0 261 0 0 0 chr2 46715635 46715664 -206540919 + (CA)n Simple_repeat Simple_repeat 1 29 0 25 0 0 0 chr2 46716070 46716095 -206540488 + AT_rich Low_complexity Low_complexity 1 25 0 21 57 0 0 chr2 46716233 46716268 -206540315 + GC_rich Low_complexity Low_complexity 1 35 0 195 224 20 0 chr2 46716887 46716936 -206539647 - MIR SINE MIR -135 127 78 181 330 119 89 chr2 46717512 46717848 -206538735 - L2 LINE L2 -54 3218 2873 2130 89 0 0 chr2 46718004 46718324 -206538259 + AluSc SINE Alu 1 320 0 215 346 60 15 chr2 46720308 46720441 -206536142 - L2 LINE L2 -10 3303 3165 267 345 21 7 chr2 46720481 46720623 -206535960 - L2 LINE L2 -236 3036 2893 191 367 86 16 chr2 46720709 46720837 -206535746 - MIR3 SINE MIR -5 203 67 855 205 17 30 chr2 46721072 46721306 -206535277 + MER46C DNA MER2_type 59 289 -49 2005 148 0 0 chr2 46721548 46721846 -206534737 - AluJb SINE Alu -14 298 1 244 297 47 47 chr2 46722142 46722290 -206534293 - MIR SINE MIR -10 252 105 1897 120 0 78 chr2 46722670 46723004 -206533579 - AluSx SINE Alu -4 308 1 2137 85 0 11 chr2 46723521 46723827 -206532756 + AluSc SINE Alu 2 304 0 2186 114 0 3 chr2 46724554 46724860 -206531723 + AluSx SINE Alu 1 305 -7 180 292 28 42 chr2 46725724 46725796 -206530787 - MER5A DNA MER1_type 0 189 119 224 244 0 0 chr2 46725904 46725945 -206530638 + MER5A DNA MER1_type 29 69 -120 1563 118 40 0 chr2 46725950 46726178 -206530405 + AluSg/x SINE Alu 73 309 -1 209 315 0 14 chr2 46726284 46726357 -206530226 + MIR SINE MIR 84 155 -107 1882 155 3 0 chr2 46727621 46728020 -206528563 - AluSx SINE Alu 0 400 1 268 274 8 60 chr2 46728386 46728461 -206528122 + CT-rich Low_complexity Low_complexity 3 71 -42 2080 122 0 32 chr2 46728461 46728772 -206527811 - AluSx SINE Alu -9 303 3 268 274 8 60 chr2 46728772 46728813 -206527770 + CT-rich Low_complexity Low_complexity 71 113 0 419 286 75 87 chr2 46731270 46731522 -206525061 - MIR SINE MIR -8 254 6 216 0 0 0 chr2 46731697 46731721 -206524862 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1538 185 3 23 chr2 46732645 46732947 -206523636 + AluJo SINE Alu 2 297 -15 782 319 115 8 chr2 46733180 46733381 -206523202 - L2 LINE L2 -8 3305 3127 207 0 0 0 chr2 46733381 46733404 -206523179 + (GGGTG)n Simple_repeat Simple_repeat 4 26 0 782 319 115 8 chr2 46733404 46733704 -206522879 - L2 LINE L2 -186 3127 2741 1077 261 44 49 chr2 46733706 46734136 -206522447 - L2 LINE L2 -873 2441 2014 1454 156 63 66 chr2 46734239 46734540 -206522043 - AluJb SINE Alu -12 300 1 2131 82 0 60 chr2 46735846 46735930 -206520653 + AluSc SINE Alu 1 89 -220 2227 63 0 81 chr2 46735930 46736264 -206520319 + AluY SINE Alu 1 307 -4 2131 82 0 60 chr2 46736264 46736494 -206520089 + AluSc SINE Alu 89 296 -13 393 305 70 0 chr2 46737046 46737174 -206519409 - L3 LINE CR1 -108 1469 1333 501 172 90 33 chr2 46737787 46737909 -206518674 - MSTD LTR MaLR 0 396 268 546 284 133 36 chr2 46738072 46738420 -206518163 - L3 LINE CR1 0 1577 1195 2310 103 3 3 chr2 46738681 46739025 -206517558 - AluSx SINE Alu 0 344 1 1630 173 118 0 chr2 46739027 46739333 -206517250 + MLT1A1 LTR MaLR 24 365 0 274 167 0 0 chr2 46739363 46739411 -206517172 - MIR SINE MIR -112 150 103 324 0 0 0 chr2 46739474 46739510 -206517073 + (CAG)n Simple_repeat Simple_repeat 2 37 0 563 258 77 22 chr2 46740481 46740663 -206515920 + MIR SINE MIR 71 262 0 2329 110 0 10 chr2 46740750 46741058 -206515525 + AluSx SINE Alu 1 305 -7 211 226 0 0 chr2 46741676 46741727 -206514856 - MIR SINE MIR -87 121 70 335 333 97 0 chr2 46742370 46742484 -206514099 - MIR SINE MIR -118 144 20 338 0 24 0 chr2 46742610 46742652 -206513931 + (CA)n Simple_repeat Simple_repeat 2 44 0 1765 184 0 0 chr2 46742773 46743087 -206513496 + AluJb SINE Alu 1 314 0 2224 110 10 7 chr2 46743227 46743391 -206513192 - AluSx SINE Alu -10 302 135 2292 95 0 16 chr2 46743391 46743695 -206512888 - AluSq SINE Alu -14 299 1 2224 110 10 7 chr2 46743695 46743831 -206512752 - AluSx SINE Alu -177 135 1 321 208 0 0 chr2 46744109 46744181 -206512402 + C-rich Low_complexity Low_complexity 1 72 0 1602 206 80 5 chr2 46744187 46744589 -206511994 - Charlie4a DNA MER1_type -68 440 9 1003 174 11 16 chr2 46744636 46744826 -206511757 + MER5A DNA MER1_type 1 189 0 911 191 11 17 chr2 46746198 46746376 -206510207 - MER5A DNA MER1_type -12 177 1 261 0 0 0 chr2 46746554 46746565 -206510018 + (TG)n Simple_repeat Simple_repeat 1 40 0 261 0 0 0 chr2 46746565 46746594 -206509989 + (TG)n Simple_repeat Simple_repeat 2 30 0 2227 123 0 0 chr2 46746613 46746913 -206509670 - AluSx SINE Alu -12 300 1 220 243 243 0 chr2 46746974 46747048 -206509535 - L3 LINE CR1 -7 1570 1479 215 296 111 12 chr2 46747130 46747211 -206509372 - MIR SINE MIR -153 109 21 2521 96 0 0 chr2 46747258 46747570 -206509013 - AluSx SINE Alu 0 312 1 1591 231 103 83 chr2 46747677 46747736 -206508847 - MLT1H1 LTR MaLR -3 552 496 1607 199 30 7 chr2 46747736 46748037 -206508546 + AluJb SINE Alu 1 308 -4 1591 231 103 83 chr2 46748037 46748509 -206508074 - MLT1H1 LTR MaLR -59 496 10 1273 306 69 18 chr2 46748649 46749211 -206507372 + Charlie7 DNA MER1_type 37 627 -1985 247 144 261 32 chr2 46749242 46749430 -206507153 + Charlie7 DNA MER1_type 2382 2612 0 2328 117 0 0 chr2 46749580 46749888 -206506695 + AluSx SINE Alu 1 308 -4 2444 79 0 0 chr2 46749970 46750261 -206506322 + AluY SINE Alu 7 297 -14 189 308 65 37 chr2 46750496 46750603 -206505980 + L2 LINE L2 3196 3305 -8 1737 267 46 6 chr2 46751446 46751922 -206504661 - MLT1J LTR MaLR -6 505 11 2475 132 41 12 chr2 46752057 46752473 -206504110 - MSTA LTR MaLR 0 428 1 2280 125 3 0 chr2 46752793 46753105 -206503478 - AluSq SINE Alu 0 313 1 503 263 103 82 chr2 46753550 46754129 -206502454 - MLT1L LTR MaLR -2 613 36 1494 199 50 13 chr2 46754405 46754706 -206501877 + AluJb SINE Alu 1 312 0 363 241 17 52 chr2 46755024 46755198 -206501385 + CT-rich Low_complexity Low_complexity 3 170 0 339 287 21 11 chr2 46755315 46755409 -206501174 + MIR3 SINE MIR 73 167 -41 3190 184 16 21 chr2 46755710 46756438 -206500145 - L1M4c LINE L1 -4706 1940 1216 668 153 99 15 chr2 46756444 46756575 -206500008 - FLAM_C SINE Alu 0 143 2 4754 205 81 22 chr2 46756576 46757744 -206498839 - L1M4c LINE L1 -5303 1239 3 307 279 63 18 chr2 46758019 46758130 -206498453 - MIR SINE MIR -75 133 18 906 298 18 57 chr2 46758630 46759019 -206497564 - MLT1J1 LTR MaLR -21 425 52 441 276 143 36 chr2 46759585 46759982 -206496601 + MLT1J LTR MaLR 35 510 -1 475 186 25 59 chr2 46760272 46760390 -206496193 + MLT1J2 LTR MaLR 30 143 -307 374 261 168 25 chr2 46760989 46761150 -206495433 + MLT1J2 LTR MaLR 241 424 -26 2361 102 3 10 chr2 46761607 46761921 -206494662 + AluSx SINE Alu 1 312 0 224 279 58 74 chr2 46762439 46762629 -206493954 + MIR SINE MIR 76 262 0 310 301 140 5 chr2 46763834 46764020 -206492563 + MIR SINE MIR 48 258 -4 1503 147 38 8 chr2 46764023 46764261 -206492322 + AluJo SINE Alu 3 247 -65 40 0 0 0 chr2 46766665 46766705 -206489878 + AT_rich Low_complexity Low_complexity 1 40 0 182 280 0 0 chr2 46767304 46767354 -206489229 + L2 LINE L2 3220 3269 -3 222 220 0 20 chr2 46768486 46768536 -206488047 + GA-rich Low_complexity Low_complexity 1 49 0 22 0 0 0 chr2 46768536 46768558 -206488025 + GC_rich Low_complexity Low_complexity 1 22 0 27 49 0 0 chr2 46769175 46769216 -206487367 + AT_rich Low_complexity Low_complexity 1 41 0 211 161 36 0 chr2 46769666 46769722 -206486861 + GA-rich Low_complexity Low_complexity 1 58 0 194 170 0 21 chr2 46769782 46769829 -206486754 + GA-rich Low_complexity Low_complexity 2 47 0 24 53 0 0 chr2 46773103 46773141 -206483442 + GC_rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr2 46773579 46773607 -206482976 + GC_rich Low_complexity Low_complexity 1 28 0 299 364 6 6 chr2 46773747 46773912 -206482671 + G-rich Low_complexity Low_complexity 2 166 0 271 286 185 8 chr2 46779635 46779754 -206476829 + MIR SINE MIR 8 147 -115 237 204 0 37 chr2 46779759 46779813 -206476770 + L2 LINE L2 3258 3309 -4 409 273 22 29 chr2 46780161 46780300 -206476283 + MIR SINE MIR 20 157 -105 2060 142 24 0 chr2 46780309 46780605 -206475978 + AluSx SINE Alu 1 303 -9 506 228 139 19 chr2 46781096 46781254 -206475329 - MIR SINE MIR -84 178 2 234 374 20 0 chr2 46781417 46781437 -206475146 - L1MA8 LINE L1 -320 5971 5952 1071 279 71 31 chr2 46781437 46782013 -206474570 - L1ME3A LINE L1 -219 5951 5353 297 140 35 0 chr2 46782689 46782746 -206473837 + FRAM SINE Alu 34 92 -74 326 175 88 0 chr2 46782978 46783058 -206473525 + L1ME4a LINE L1 5759 5845 -276 594 315 11 0 chr2 46783144 46783325 -206473258 - MIR SINE MIR 0 262 80 1278 196 13 0 chr2 46783923 46784158 -206472425 - MER8 DNA MER2_type 0 239 2 315 150 0 0 chr2 46784201 46784261 -206472322 + (TG)n Simple_repeat Simple_repeat 2 61 0 989 217 65 62 chr2 46784393 46784730 -206471853 + MLT1A1 LTR MaLR 28 365 0 247 255 43 53 chr2 46784986 46785080 -206471503 - L2 LINE L2 -22 3291 3199 484 255 87 7 chr2 46785622 46785771 -206470812 - MIR SINE MIR -94 168 8 214 318 54 86 chr2 46786759 46787039 -206469544 + L2 LINE L2 2636 2906 -408 526 295 107 70 chr2 46787102 46787400 -206469183 + MLT1I LTR MaLR 75 383 -26 263 273 36 128 chr2 46787450 46787699 -206468884 + L2 LINE L2 2976 3201 -71 1705 219 110 75 chr2 46787774 46787853 -206468730 + MLT1G1 LTR MaLR 1 76 -519 2141 150 0 6 chr2 46787853 46788167 -206468416 - AluSx SINE Alu 0 312 1 1705 219 110 75 chr2 46788167 46788661 -206467922 + MLT1G1 LTR MaLR 76 594 -1 1019 139 0 26 chr2 46789069 46789220 -206467363 - FRAM SINE Alu -5 171 25 237 304 12 31 chr2 46789257 46789418 -206467165 + (CATATA)n Simple_repeat Simple_repeat 1 158 0 2426 104 0 0 chr2 46789590 46789898 -206466685 + AluSc SINE Alu 1 308 -1 291 316 0 20 chr2 46790587 46790685 -206465898 + L2 LINE L2 3143 3238 -34 * 518 349 90 17 chr2 46790681 46790982 -206465601 + L2 LINE L2 2633 2955 -359 746 270 31 10 chr2 46791000 46791196 -206465387 + L2 LINE L2 3114 3313 0 351 317 165 30 chr2 46792135 46792365 -206464218 - MIR SINE MIR 0 262 2 220 267 67 0 chr2 46793099 46793159 -206463424 + MIR SINE MIR 82 145 -117 278 298 61 69 chr2 46793652 46793783 -206462800 - L2 LINE L2 -20 3252 3123 441 249 106 51 chr2 46794193 46794430 -206462153 + L2 LINE L2 3060 3309 -4 314 318 91 26 chr2 46794615 46794769 -206461814 + MIR3 SINE MIR 42 205 -3 1909 169 3 0 chr2 46794825 46795132 -206461451 + AluJb SINE Alu 4 311 -1 2329 112 0 3 chr2 46795958 46796270 -206460313 - AluSx SINE Alu -1 311 1 234 317 172 14 chr2 46796284 46796429 -206460154 - MIR3 SINE MIR -21 187 20 802 249 79 63 chr2 46796553 46797003 -206459580 + MLT1G LTR MaLR 1 436 -106 39 22 0 0 chr2 46797026 46797072 -206459511 + AT_rich Low_complexity Low_complexity 1 46 0 1765 142 10 53 chr2 46797072 46797374 -206459209 - AluJo SINE Alu -23 289 1 295 117 138 0 chr2 46797383 46797445 -206459138 + MLT1G1 LTR MaLR 478 594 -1 838 155 39 17 chr2 46798394 46798575 -206458008 + MER53 DNA DNA 2 186 -3 309 297 94 23 chr2 46798668 46798796 -206457787 - MIR3 SINE MIR -48 160 24 209 325 0 49 chr2 46798781 46798904 -206457679 + L2 LINE L2 3008 3124 -189 * 507 185 31 0 chr2 46798904 46799034 -206457549 + CT-rich Low_complexity Low_complexity 1 134 0 365 287 39 23 chr2 46799034 46799163 -206457420 + L2 LINE L2 3182 3312 -1 1664 169 48 14 chr2 46799883 46800173 -206456410 + AluJo SINE Alu 1 300 -12 528 311 24 18 chr2 46800213 46800380 -206456203 - MIR SINE MIR -14 248 81 231 105 0 70 chr2 46801059 46801116 -206455467 + (CCCCAG)n Simple_repeat Simple_repeat 6 58 0 308 250 11 54 chr2 46801485 46801577 -206455006 + MIR SINE MIR 59 146 -116 1047 253 31 26 chr2 46801580 46801930 -206454653 + MLT1G LTR MaLR 2 372 -223 1494 149 122 75 chr2 46802698 46803126 -206453457 - LTR7 LTR ERV1 -2 448 1 2325 91 59 13 chr2 46803126 46803501 -206453082 - HERVH LTR ERV1 0 7713 7322 1336 124 18 5 chr2 46803499 46803716 -206452867 - HERVH LTR ERV1 -1894 5819 5600 * 3976 149 24 8 chr2 46803708 46804366 -206452217 - HERVH LTR ERV1 -2557 5156 4488 3197 116 6 6 chr2 46804368 46804870 -206451713 - HERVH LTR ERV1 -3720 3993 3492 827 149 20 0 chr2 46804860 46805008 -206451575 - HERVH LTR ERV1 -4423 3290 3140 * 19368 110 9 10 chr2 46805002 46807994 -206448589 - HERVH LTR ERV1 -4726 2987 1 1514 145 168 30 chr2 46807996 46808390 -206448193 - LTR7 LTR ERV1 -2 448 1 507 269 143 0 chr2 46808755 46808930 -206447653 + MIR SINE MIR 3 202 -60 225 0 0 0 chr2 46808954 46808979 -206447604 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1817 185 0 16 chr2 46809764 46810078 -206446505 - AluJo SINE Alu -3 309 1 222 374 65 9 chr2 46810647 46810754 -206445829 - MIR SINE MIR -79 129 17 524 155 6 17 chr2 46811823 46811984 -206444599 + CT-rich Low_complexity Low_complexity 1 159 0 476 191 0 22 chr2 46811998 46812087 -206444496 - AluJo SINE Alu -103 209 123 281 195 0 13 chr2 46813768 46813845 -206442738 + CT-rich Low_complexity Low_complexity 4 79 0 470 258 57 0 chr2 46813948 46814072 -206442511 - MIR SINE MIR -8 254 124 1600 197 35 37 chr2 46814125 46814500 -206442083 - MLT1A2 LTR MaLR 0 374 1 238 308 13 0 chr2 46814767 46814845 -206441738 + MIR SINE MIR 47 125 -137 1362 144 79 25 chr2 46815235 46815512 -206441071 + L1MB7 LINE L1 5874 6165 -19 185 236 0 53 chr2 46816832 46816960 -206439623 - MER5A DNA MER1_type 0 189 11 257 346 44 44 chr2 46817094 46817276 -206439307 + L2 LINE L2 2880 3061 -211 405 308 77 28 chr2 46817448 46817591 -206438992 + MIR3 SINE MIR 55 204 -4 217 211 0 0 chr2 46817918 46817956 -206438627 + G-rich Low_complexity Low_complexity 2 39 0 411 299 169 0 chr2 46818606 46818783 -206437800 + MIR SINE MIR 5 211 -51 212 255 21 0 chr2 46819392 46819439 -206437144 + MIR3 SINE MIR 122 169 -39 1538 53 5 0 chr2 46819526 46819714 -206436869 - L1PA8 LINE L1 -5 6167 5979 516 239 57 91 chr2 46820039 46820203 -206436380 - MIR SINE MIR -2 260 103 2163 134 0 3 chr2 46820203 46820495 -206436088 + AluSx SINE Alu 1 291 -21 516 239 57 91 chr2 46820495 46820539 -206436044 - MIR SINE MIR -159 103 59 2683 126 106 0 chr2 46820631 46820985 -206435598 - L1PA16 LINE L1 0 6166 5752 309 51 0 0 chr2 46820985 46821024 -206435559 + (CA)n Simple_repeat Simple_repeat 1 39 0 2683 126 106 0 chr2 46821024 46821120 -206435463 - L1PA16 LINE L1 -414 5752 5668 852 236 84 73 chr2 46822523 46823084 -206433499 + L2 LINE L2 2681 3241 -72 324 304 148 2 chr2 46823099 46823249 -206433334 + MIR3 SINE MIR 4 183 -25 501 259 113 27 chr2 46874441 46874626 -206381957 - MLT1K LTR MaLR -17 571 371 842 238 58 54 chr2 46874674 46875038 -206381545 - MER115 DNA AcHobo -280 413 2 2312 65 54 0 chr2 46875767 46876061 -206380522 - AluY SINE Alu -1 310 1 401 266 86 0 chr2 46878453 46878592 -206377991 - MIR3 SINE MIR -6 202 52 2133 139 6 29 chr2 46879485 46879831 -206376752 - MER2 DNA MER2_type -2 343 6 1597 221 82 16 chr2 46880434 46880537 -206376046 - Charlie4a DNA MER1_type -1455 506 411 2352 100 0 13 chr2 46880537 46880846 -206375737 + AluSx SINE Alu 1 305 -7 1597 221 82 16 chr2 46880846 46881181 -206375402 - Charlie4a DNA MER1_type -1550 411 39 2422 207 52 51 chr2 46881766 46882678 -206373905 + L1ME3 LINE L1 5131 6038 -124 914 233 105 24 chr2 46882819 46883163 -206373420 + L1ME LINE L1 5191 5613 -549 234 0 0 0 chr2 46883314 46883340 -206373243 + (T)n Simple_repeat Simple_repeat 1 26 0 340 317 7 28 chr2 46884410 46884552 -206372031 - L2 LINE L2 0 3272 3134 2232 118 0 13 chr2 46884569 46884874 -206371709 - AluSx SINE Alu -11 301 1 280 245 7 77 chr2 46885517 46885647 -206370936 - MIR SINE MIR -65 143 20 1667 192 29 6 chr2 46885981 46886293 -206370290 - MER58B DNA MER1_type -2 339 21 384 152 0 0 chr2 46886394 46886460 -206370123 + T-rich Low_complexity Low_complexity 1 66 0 1037 122 5 102 chr2 46886791 46886987 -206369596 - AluJb SINE Alu 0 312 136 2185 104 7 23 chr2 46887088 46887422 -206369161 + AluSg SINE Alu 1 329 0 198 300 138 0 chr2 46887422 46887502 -206369081 + MIR SINE MIR 117 207 -55 393 225 8 62 chr2 46887568 46887697 -206368886 + L2 LINE L2 3192 3313 0 559 169 55 164 chr2 46888544 46888727 -206367856 - AluSg/x SINE Alu -13 299 137 464 319 100 17 chr2 46889065 46889306 -206367277 + MIR SINE MIR 2 262 0 214 242 32 53 chr2 46891075 46891170 -206365413 + MIR SINE MIR 126 218 -44 331 235 96 30 chr2 46892296 46892378 -206364205 - L1MCa LINE L1 -1339 6983 6908 2233 85 0 0 chr2 46892378 46892684 -206363899 - AluY SINE Alu 0 306 1 331 235 96 30 chr2 46892684 46892742 -206363841 - L1MCa LINE L1 -1414 6908 1975 2142 92 0 3 chr2 46893730 46894013 -206362570 - AluSg SINE Alu -28 282 1 440 153 0 0 chr2 46894013 46894085 -206362498 + MSTA LTR MaLR 357 428 0 673 90 0 0 chr2 46894086 46894175 -206362408 + L1MB1 LINE L1 5624 5712 -456 1012 159 6 31 chr2 46894175 46894338 -206362245 - MER1B DNA MER1_type -124 173 15 2204 141 50 21 chr2 46894338 46894757 -206361826 + L1MB1 LINE L1 5736 6166 -2 276 298 88 18 chr2 46895705 46895819 -206360764 + MIR3 SINE MIR 39 160 -48 505 247 61 12 chr2 46895992 46896191 -206360392 + MIR SINE MIR 17 260 -2 225 0 0 0 chr2 46897137 46897162 -206359421 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 428 300 0 0 chr2 46897918 46898018 -206358565 + MIR3 SINE MIR 109 208 0 527 300 112 5 chr2 46898105 46898328 -206358255 - MIR SINE MIR 0 262 16 1998 147 43 100 chr2 46898385 46898854 -206357729 + L1MB4 LINE L1 5715 6156 -24 1941 113 0 7 chr2 46898871 46899162 -206357421 + AluSp SINE Alu 1 289 -24 22 35 0 0 chr2 46899165 46899194 -206357389 + AT_rich Low_complexity Low_complexity 1 29 0 296 361 55 25 chr2 46899199 46899401 -206357182 - MIR SINE MIR -12 250 43 3138 106 82 0 chr2 46900006 46900479 -206356104 - MER75 DNA T2_type -2 512 1 684 306 65 16 chr2 46900914 46901162 -206355421 + MIR SINE MIR 2 261 -1 4662 159 27 26 chr2 46901431 46902266 -206354317 - L1MB8 LINE L1 -1 6177 5330 1837 137 13 33 chr2 46902266 46902572 -206354011 - AluJb SINE Alu -12 300 1 4662 159 27 26 chr2 46902572 46902756 -206353827 - L1MB8 LINE L1 -848 5330 5148 278 276 57 53 chr2 46902785 46903049 -206353534 + L1 LINE L1 4181 4445 -1701 22 0 0 0 chr2 46905550 46905572 -206351011 + GC_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr2 46906710 46906733 -206349850 + AT_rich Low_complexity Low_complexity 1 23 0 1023 198 135 64 chr2 46908622 46908956 -206347627 + L1ME3A LINE L1 5797 6161 -9 306 348 81 31 chr2 46911156 46911317 -206345266 + MIR SINE MIR 93 261 -1 1930 124 21 0 chr2 46913402 46913692 -206342891 - AluSg SINE Alu -14 296 1 590 251 127 42 chr2 46914677 46915008 -206341575 - MLT1H1 LTR MaLR 0 555 197 1828 132 0 4 chr2 46915038 46915304 -206341279 + AluSq SINE Alu 1 265 -48 260 235 202 17 chr2 46915702 46915821 -206340762 - L2 LINE L2 -1 3312 3172 578 294 71 40 chr2 46915828 46916080 -206340503 - MIR SINE MIR 0 262 3 2118 181 8 55 chr2 46916269 46916761 -206339822 + Charlie1b DNA MER1_type 55 523 0 397 306 107 57 chr2 46919032 46919453 -206337130 + HAL1 LINE L1 861 1302 -1205 329 313 99 60 chr2 46919461 46919643 -206336940 + MIR SINE MIR 22 210 -52 242 198 187 66 chr2 46920360 46920451 -206336132 + MIR SINE MIR 119 220 -42 393 290 97 0 chr2 46921253 46921408 -206335175 + MIR SINE MIR 27 196 -66 23 54 0 0 chr2 46921984 46922021 -206334562 + AT_rich Low_complexity Low_complexity 1 37 0 565 322 6 11 chr2 46922041 46922224 -206334359 + MIR SINE MIR 81 262 0 2687 130 26 5 chr2 46922289 46922704 -206333879 - MSTA LTR MaLR 0 428 5 1535 281 44 13 chr2 46923196 46923655 -206332928 + MLT1J LTR MaLR 2 474 -37 695 217 333 4 chr2 46923992 46924232 -206332351 + MER5C DNA MER1_type 1 319 -5 501 205 25 3 chr2 46924427 46924554 -206332029 - LTR37A LTR ERV1 -22 446 280 11471 172 4 19 chr2 46924581 46927935 -206328648 - L1PB1 LINE L1 -1 6866 3565 4985 193 199 6 chr2 46928081 46929359 -206327224 - L1PB1 LINE L1 -5333 1530 6 330 26 0 0 chr2 46929637 46929676 -206326907 + (CA)n Simple_repeat Simple_repeat 1 39 0 279 287 42 21 chr2 46929891 46930034 -206326549 - LTR37B LTR ERV1 -317 151 6 301 278 172 45 chr2 46930732 46930963 -206325620 + MIR SINE MIR 4 262 0 1577 183 24 3 chr2 46931070 46931398 -206325185 + AluJo SINE Alu 1 312 0 2136 105 3 10 chr2 46932662 46932975 -206323608 + AluSx SINE Alu 1 311 -1 444 291 36 18 chr2 46932979 46933144 -206323439 - MLT1L LTR MaLR -43 572 405 411 250 46 0 chr2 46933180 46933288 -206323295 - MLT1L LTR MaLR -311 304 192 2140 109 3 22 chr2 46933577 46933890 -206322693 + AluSx SINE Alu 1 307 -5 896 208 29 0 chr2 46935774 46935947 -206320636 + MER45A DNA AcHobo 1 178 0 3177 111 11 1 chr2 46935983 46936719 -206319864 + L1PA12 LINE L1 4935 5679 -489 1928 75 0 4 chr2 46936819 46937071 -206319512 + L1PA12 LINE L1 5918 6168 0 542 232 71 19 chr2 46938070 46938225 -206318358 - MIR SINE MIR -2 260 98 462 118 219 101 chr2 46938895 46939014 -206317569 + MSTB1 LTR MaLR 100 232 -200 5038 179 55 15 chr2 46939083 46939555 -206317028 - Tigger6a DNA MER2_type -531 1066 614 2785 108 23 19 chr2 46939555 46939982 -206316601 + MSTB1 LTR MaLR 4 432 0 5038 179 55 15 chr2 46939982 46940534 -206316049 - Tigger6a DNA MER2_type -983 614 1 443 277 72 72 chr2 46940538 46940733 -206315850 - MIR SINE MIR -66 196 2 266 231 0 0 chr2 46941728 46941780 -206314803 + LTR30 LTR ERV1 1 52 -670 1224 125 0 157 chr2 46941780 46942061 -206314522 + LTR12 LTR ERV1 53 289 -425 305 241 11 0 chr2 46942061 46942148 -206314435 + LTR30 LTR ERV1 556 643 -79 718 100 0 0 chr2 46942150 46942250 -206314333 + LTR12 LTR ERV1 615 714 0 209 292 67 0 chr2 46942835 46942924 -206313659 - MIR SINE MIR -115 147 53 238 386 40 0 chr2 46943162 46943263 -206313320 + L2 LINE L2 3136 3240 -32 703 135 0 9 chr2 46943279 46943390 -206313193 + FRAM SINE Alu 18 127 -49 514 198 28 19 chr2 46943407 46943513 -206313070 + MLT1G3 LTR MaLR 163 269 -261 3929 224 90 16 chr2 46943513 46944664 -206311919 - L2 LINE L2 -689 2625 1390 10492 58 93 6 chr2 46944849 46946270 -206310313 - L1P LINE L1 -4602 1544 1 2192 202 15 13 chr2 46946284 46946750 -206309833 + MLT1C LTR MaLR 1 467 0 261 94 31 47 chr2 46946780 46946844 -206309739 + (CATATA)n Simple_repeat Simple_repeat 5 67 0 2866 81 33 15 chr2 46946900 46947297 -206309286 - MLT2A1 LTR ERVL -40 404 1 1390 267 121 15 chr2 46948121 46948526 -206308057 - MLT1J LTR MaLR -6 505 58 293 297 10 0 chr2 46948635 46948736 -206307847 - MIR SINE MIR -50 212 111 1403 251 41 34 chr2 46948744 46949155 -206307428 - LTR16A LTR ERVL 0 450 37 261 274 11 32 chr2 46949190 46949285 -206307298 - MIR SINE MIR -100 108 16 366 282 96 19 chr2 46949827 46949983 -206306600 - MIR3 SINE MIR -8 200 33 181 243 84 28 chr2 46952333 46952440 -206304143 + L2 LINE L2 2933 3045 -268 186 225 0 0 chr2 46952556 46952596 -206303987 + L2 LINE L2 3219 3258 -14 635 253 96 39 chr2 46953892 46954121 -206302462 + MIR SINE MIR 17 258 -4 1836 182 16 14 chr2 46954244 46954607 -206301976 + MLT1A1 LTR MaLR 2 365 0 1709 164 57 3 chr2 46954619 46954990 -206301593 - MER3 DNA MER1_type 0 2624 2234 588 174 113 0 chr2 46954993 46955108 -206301475 - MER3 DNA MER1_type -41 168 41 43869 31 22 2 chr2 46956428 46962460 -206294123 + L1PA2 LINE L1 1 6155 0 181 304 0 0 chr2 46962518 46962564 -206294019 + MIR SINE MIR 82 127 -81 523 293 130 5 chr2 46963655 46963863 -206292720 + MIR SINE MIR 16 249 -13 227 183 268 0 chr2 46963884 46963955 -206292628 + L2 LINE L2 3223 3312 -1 240 359 0 10 chr2 46965113 46965216 -206291367 - MIR SINE MIR -10 252 151 375 306 88 7 chr2 46965419 46965566 -206291017 - MIR SINE MIR -101 161 3 425 287 17 9 chr2 46965892 46966007 -206290576 + L2 LINE L2 3197 3312 -1 22 0 0 0 chr2 46966648 46966670 -206289913 + AT_rich Low_complexity Low_complexity 1 22 0 633 226 21 90 chr2 46966708 46966799 -206289784 - L1MC4a LINE L1 -1904 5904 5808 2317 59 0 0 chr2 46966799 46967105 -206289478 - AluY SINE Alu 0 317 12 633 226 21 90 chr2 46967105 46967245 -206289338 - L1MC4a LINE L1 -2000 5808 5687 5800 73 1 1 chr2 46967301 46968055 -206288528 + L1PA8 LINE L1 5419 6172 0 4127 168 62 46 chr2 46968123 46969016 -206287567 - L1MD2 LINE L1 -2 6357 5451 293 294 12 0 chr2 46969089 46969174 -206287409 - MIR SINE MIR 0 262 177 292 247 52 0 chr2 46969888 46969965 -206286618 - MIR3 SINE MIR -11 197 117 210 323 50 0 chr2 46970047 46970146 -206286437 - MIR SINE MIR -96 166 63 262 330 116 9 chr2 46970260 46970372 -206286211 + MIR3 SINE MIR 61 184 -24 4584 64 5 18 chr2 46971123 46971731 -206284852 - L1PA8 LINE L1 -3 6169 5570 537 242 141 24 chr2 46972030 46972278 -206284305 - L1MC4a LINE L1 -1899 5909 5633 1305 112 0 0 chr2 46972297 46972467 -206284116 + AluSp SINE Alu 130 299 -14 350 327 62 12 chr2 46972759 46972921 -206283662 + MIR3 SINE MIR 30 199 -9 2203 135 33 28 chr2 46973369 46973731 -206282852 + THE1B LTR MaLR 1 364 0 448 230 0 0 chr2 46974417 46974504 -206282079 + L2 LINE L2 3227 3313 0 275 313 69 64 chr2 46974503 46975198 -206281385 - L2 LINE L2 -175 3138 2372 * 551 288 93 4 chr2 46975248 46975474 -206281109 + MIR SINE MIR 17 262 0 754 196 6 19 chr2 46975585 46975743 -206280840 + MIR SINE MIR 7 162 -100 407 308 8 0 chr2 46975893 46976026 -206280557 - MIR SINE MIR -26 236 103 435 216 78 39 chr2 46976070 46976223 -206280360 - L1MC4a LINE L1 -423 5698 5540 592 286 36 29 chr2 46976286 46976717 -206279866 - L1MEc LINE L1 -3803 2412 2018 364 288 49 39 chr2 46976869 46977074 -206279509 + L1MB7 LINE L1 17 223 -6319 491 148 24 129 chr2 46977347 46977437 -206279146 - L1MC4a LINE L1 -238 7556 7466 1993 151 3 0 chr2 46977437 46977735 -206278848 - AluSx SINE Alu -12 300 2 491 148 24 129 chr2 46977735 46977801 -206278782 - L1MC4a LINE L1 -328 7466 7395 * 2723 258 69 41 chr2 46977794 46978502 -206278081 + L1MB7 LINE L1 1285 1971 -4854 2119 130 13 0 chr2 46978502 46978810 -206277773 + AluSx SINE Alu 1 312 0 2723 258 69 41 chr2 46978810 46979455 -206277128 + L1MB7 LINE L1 1971 2717 -4108 262 171 26 26 chr2 46979614 46979673 -206276910 + (TA)n Simple_repeat Simple_repeat 1 62 -14 1458 177 0 4 chr2 46979673 46979910 -206276673 - AluJb SINE Alu -76 236 1 262 171 26 26 chr2 46979910 46979926 -206276657 + (TA)n Simple_repeat Simple_repeat 61 76 0 348 308 83 20 chr2 46980304 46980557 -206276026 - L1M4 LINE L1 -1462 4684 4416 2172 100 12 40 chr2 46980706 46981027 -206275556 - AluSx SINE Alu 0 312 1 3130 221 57 80 chr2 46981029 46982877 -206273706 - L1ME3A LINE L1 -2 6168 4391 1284 179 52 69 chr2 46982877 46983168 -206273415 - AluJo SINE Alu -26 286 1 3130 221 57 80 chr2 46983168 46983404 -206273179 - L1ME3A LINE L1 -1779 4391 4151 233 125 0 21 chr2 46983930 46983978 -206272605 + (TGAA)n Simple_repeat Simple_repeat 1 47 0 1990 122 0 72 chr2 46984251 46984571 -206272012 - AluSq SINE Alu -16 297 1 1039 101 0 29 chr2 46984572 46984711 -206271872 - AluSq/x SINE Alu -178 135 1 538 306 40 14 chr2 46986517 46986792 -206269791 + L2 LINE L2 1840 2121 -1193 432 250 0 0 chr2 46986799 46986903 -206269680 + L1MB7 LINE L1 4381 4484 -2160 696 207 42 26 chr2 46986903 46987096 -206269487 + MLT1D LTR MaLR 310 505 0 5075 200 44 30 chr2 46987133 46989291 -206267292 + L1MB7 LINE L1 4491 6674 -8 364 333 118 31 chr2 46989311 46989599 -206266984 + L2 LINE L2 2115 2427 -887 447 308 90 0 chr2 46989959 46990225 -206266358 - L2 LINE L2 -1047 2267 1978 218 299 80 51 chr2 46990238 46990375 -206266208 + L2 LINE L2 2930 3070 -202 1012 126 146 214 chr2 46991361 46991820 -206264763 - MSTA LTR MaLR 0 428 1 655 239 133 9 chr2 46992249 46992475 -206264108 + MIR SINE MIR 8 261 -1 199 325 0 39 chr2 46992833 46992910 -206263673 - L2 LINE L2 -2 3311 3238 371 319 86 6 chr2 46992928 46993091 -206263492 + MIR SINE MIR 20 195 -67 211 279 108 54 chr2 46993485 46993614 -206262969 - MIR3 SINE MIR -68 140 5 390 21 0 0 chr2 46993755 46993802 -206262781 + (CA)n Simple_repeat Simple_repeat 2 48 0 269 321 85 0 chr2 46995168 46995274 -206261309 + L2 LINE L2 3197 3311 -2 686 225 53 121 chr2 46995530 46995947 -206260636 - MLT1H LTR MaLR 0 549 49 213 274 0 0 chr2 46998156 46998207 -206258376 + MIR SINE MIR 48 98 -164 1383 227 47 5 chr2 46998228 46998408 -206258175 - MER119 DNA MER1_type 0 583 412 2289 92 3 0 chr2 46998408 46998735 -206257848 - AluSx SINE Alu 0 328 1 1383 227 47 5 chr2 46998735 46999046 -206257537 - MER119 DNA MER1_type -171 412 31 186 182 0 0 chr2 46999645 46999678 -206256905 + L2 LINE L2 3279 3311 -2 1112 138 0 0 chr2 47001530 47001690 -206254893 - AluSg/x SINE Alu -4 306 147 2135 129 0 3 chr2 47002012 47002307 -206254276 + AluSx SINE Alu 1 294 -18 801 222 116 110 chr2 47002792 47003076 -206253507 - MLT1J LTR MaLR -8 503 222 1738 151 4 0 chr2 47003076 47003348 -206253235 + AluJo SINE Alu 32 304 -8 801 222 116 110 chr2 47003348 47003484 -206253099 - MLT1J LTR MaLR -289 222 77 1297 210 111 43 chr2 47003484 47003855 -206252728 - MLT2C1 LTR ERVL -1 396 1 801 222 116 110 chr2 47003855 47003932 -206252651 - MLT1J LTR MaLR -434 77 2 2299 101 3 0 chr2 47003951 47004248 -206252335 - AluSg SINE Alu -11 299 2 674 212 22 7 chr2 47004433 47004570 -206252013 - MER58B DNA MER1_type -6 335 197 325 229 147 37 chr2 47004640 47004749 -206251834 - MIR SINE MIR -63 145 25 276 170 0 0 chr2 47004851 47004904 -206251679 + (TG)n Simple_repeat Simple_repeat 2 54 0 543 192 75 0 chr2 47005244 47005364 -206251219 + MER3 DNA MER1_type 41 122 -87 994 182 58 12 chr2 47005373 47005615 -206250968 + MER3 DNA MER1_type 2234 2486 0 816 160 0 23 chr2 47005655 47005786 -206250797 + FLAM_C SINE Alu 1 128 -15 576 133 66 60 chr2 47005787 47005938 -206250645 + MER3 DNA MER1_type 2433 2584 0 193 364 0 0 chr2 47006265 47006320 -206250263 + MIR SINE MIR 93 147 -61 1892 262 126 24 chr2 47007463 47008311 -206248272 + L2 LINE L2 1 935 -2379 478 325 25 25 chr2 47008313 47008476 -206248107 + MER91A DNA MER1_type 5 167 -29 224 303 66 0 chr2 47008477 47008553 -206248030 + MER91A DNA MER1_type 116 196 0 * 773 281 85 7 chr2 47008553 47008808 -206247775 + L2 LINE L2 919 1194 -2120 201 352 55 28 chr2 47009248 47009430 -206247153 + L2 LINE L2 2567 2753 -561 209 108 27 0 chr2 47009498 47009535 -206247048 + (CA)n Simple_repeat Simple_repeat 2 39 0 230 220 0 40 chr2 47009877 47009977 -206246606 + (TGAA)n Simple_repeat Simple_repeat 1 96 0 2641 124 32 2 chr2 47010355 47010767 -206245816 + MSTA LTR MaLR 1 424 -4 180 0 0 0 chr2 47011703 47011723 -206244860 + (A)n Simple_repeat Simple_repeat 1 20 0 192 179 0 0 chr2 47011907 47011946 -206244637 + (TG)n Simple_repeat Simple_repeat 2 40 0 2269 111 60 23 chr2 47013074 47013425 -206243158 - THE1B LTR MaLR 0 364 1 641 280 118 24 chr2 47015008 47015633 -206240950 - L2 LINE L2 -3 3310 2567 1066 274 22 11 chr2 47016568 47016933 -206239650 + L1M4c LINE L1 1140 1508 -4876 7444 231 94 40 chr2 47016971 47019903 -206236680 + L1M4c LINE L1 2115 5318 -1064 1129 204 38 107 chr2 47019903 47020295 -206236288 + MLT1A1 LTR MaLR 1 365 0 7444 231 94 40 chr2 47020295 47020378 -206236205 + L1M4c LINE L1 5318 5395 -987 307 272 12 12 chr2 47020420 47020501 -206236082 - MIR SINE MIR -163 99 19 12235 177 46 26 chr2 47021017 47025438 -206231145 + L1M2 LINE L1 309 4821 -2027 872 134 0 8 chr2 47025438 47025572 -206231011 + MLT1A1 LTR MaLR 233 365 0 378 0 0 0 chr2 47025847 47025889 -206230694 + (TG)n Simple_repeat Simple_repeat 2 43 0 411 300 185 0 chr2 47028154 47028354 -206228229 + MIR SINE MIR 2 238 -24 1282 235 93 12 chr2 47028712 47029044 -206227539 + LTR16A LTR ERVL 89 447 -3 428 229 21 64 chr2 47029135 47029275 -206227308 - MER94 DNA DNA 0 134 1 2926 152 14 29 chr2 47030069 47030581 -206226002 - Tigger6b DNA MER2_type 0 1597 1094 * 4625 164 40 14 chr2 47030576 47031442 -206225141 - Tigger6b DNA MER2_type -707 890 2 991 269 99 12 chr2 47031464 47031798 -206224785 + MLT1I LTR MaLR 47 409 0 1873 123 48 7 chr2 47032014 47032307 -206224276 + MSTC LTR MaLR 118 422 -6 958 224 77 42 chr2 47032450 47032803 -206223780 - L1MC5 LINE L1 -440 7521 7157 580 233 143 36 chr2 47034333 47034556 -206222027 + MIR SINE MIR 16 262 0 694 235 114 43 chr2 47034883 47035164 -206221419 - MLT1K LTR MaLR -117 471 171 761 108 9 0 chr2 47035939 47036050 -206220533 + L1 LINE L1 4067 4178 -1968 401 266 86 0 chr2 47136418 47136557 -206120026 - MIR3 SINE MIR -6 202 52 2133 139 6 29 chr2 47137450 47137796 -206118787 - MER2 DNA MER2_type -2 343 6 1597 221 82 16 chr2 47138399 47138502 -206118081 - Charlie4a DNA MER1_type -1455 506 411 2352 100 0 13 chr2 47138502 47138811 -206117772 + AluSx SINE Alu 1 305 -7 1597 221 82 16 chr2 47138811 47139146 -206117437 - Charlie4a DNA MER1_type -1550 411 39 2422 207 52 51 chr2 47139731 47140643 -206115940 + L1ME3 LINE L1 5131 6038 -124 914 233 105 24 chr2 47140784 47141128 -206115455 + L1ME LINE L1 5191 5613 -549 267 31 0 0 chr2 47141276 47141308 -206115275 + (T)n Simple_repeat Simple_repeat 1 32 0 340 317 7 28 chr2 47142459 47142601 -206113982 - L2 LINE L2 0 3272 3134 2232 118 0 13 chr2 47142618 47142923 -206113660 - AluSx SINE Alu -11 301 1 280 245 7 77 chr2 47143566 47143696 -206112887 - MIR SINE MIR -65 143 20 1667 192 29 6 chr2 47144030 47144342 -206112241 - MER58B DNA MER1_type -2 339 21 1037 122 5 102 chr2 47144441 47144675 -206111908 - AluJb SINE Alu 0 350 136 2185 104 7 23 chr2 47144776 47145110 -206111473 + AluSg SINE Alu 1 329 0 198 300 138 0 chr2 47145110 47145190 -206111393 + MIR SINE MIR 117 207 -55 393 225 8 62 chr2 47145256 47145385 -206111198 + L2 LINE L2 3192 3313 0 559 169 55 164 chr2 47146232 47146415 -206110168 - AluSg/x SINE Alu -13 299 137 464 319 100 17 chr2 47146753 47146994 -206109589 + MIR SINE MIR 2 262 0 312 118 44 0 chr2 47149986 47150054 -206106529 + (TA)n Simple_repeat Simple_repeat 1 71 0 2364 85 0 0 chr2 47150066 47150372 -206106211 - AluY SINE Alu 0 306 1 201 352 55 28 chr2 47151602 47151784 -206104799 + L2 LINE L2 2567 2753 -561 209 108 27 0 chr2 47151852 47151889 -206104694 + (CA)n Simple_repeat Simple_repeat 2 39 0 230 220 0 40 chr2 47152231 47152331 -206104252 + (TGAA)n Simple_repeat Simple_repeat 1 96 0 2641 124 32 2 chr2 47152709 47153121 -206103462 + MSTA LTR MaLR 1 424 -4 180 0 0 0 chr2 47154057 47154077 -206102506 + (A)n Simple_repeat Simple_repeat 1 20 0 192 179 0 0 chr2 47154261 47154300 -206102283 + (TG)n Simple_repeat Simple_repeat 2 40 0 2269 111 60 23 chr2 47155428 47155779 -206100804 - THE1B LTR MaLR 0 364 1 641 280 118 24 chr2 47157362 47157987 -206098596 - L2 LINE L2 -3 3310 2567 1066 274 22 11 chr2 47158922 47159287 -206097296 + L1M4c LINE L1 1140 1508 -4876 7444 231 94 40 chr2 47159325 47162257 -206094326 + L1M4c LINE L1 2115 5318 -1064 1129 204 38 107 chr2 47162257 47162649 -206093934 + MLT1A1 LTR MaLR 1 365 0 7444 231 94 40 chr2 47162649 47162732 -206093851 + L1M4c LINE L1 5318 5395 -987 307 272 12 12 chr2 47162774 47162855 -206093728 - MIR SINE MIR -163 99 19 12235 177 46 26 chr2 47163371 47167792 -206088791 + L1M2 LINE L1 309 4821 -2027 872 134 0 8 chr2 47167792 47167926 -206088657 + MLT1A1 LTR MaLR 233 365 0 378 0 0 0 chr2 47168201 47168243 -206088340 + (TG)n Simple_repeat Simple_repeat 2 43 0 411 300 185 0 chr2 47170507 47170707 -206085876 + MIR SINE MIR 2 238 -24 1282 235 93 12 chr2 47171064 47171396 -206085187 + LTR16A LTR ERVL 89 447 -3 428 229 21 64 chr2 47171487 47171627 -206084956 - MER94 DNA DNA 0 134 1 2926 152 14 29 chr2 47172421 47172933 -206083650 - Tigger6b DNA MER2_type 0 1597 1094 * 4625 164 40 14 chr2 47172928 47173794 -206082789 - Tigger6b DNA MER2_type -707 890 2 991 269 99 12 chr2 47173816 47174150 -206082433 + MLT1I LTR MaLR 47 409 0 1873 123 48 7 chr2 47174366 47174659 -206081924 + MSTC LTR MaLR 118 422 -6 958 224 77 42 chr2 47174802 47175155 -206081428 - L1MC5 LINE L1 -440 7521 7157 580 233 143 36 chr2 47176684 47176907 -206079676 + MIR SINE MIR 16 262 0 694 235 114 43 chr2 47177234 47177515 -206079068 - MLT1K LTR MaLR -117 471 171 2269 163 53 9 chr2 47178290 47178739 -206077844 + L1MB1 LINE L1 4067 4535 -1611 1955 134 8 37 chr2 47178739 47179139 -206077444 - MER1B DNA MER1_type -1 338 1 4306 162 10 30 chr2 47179141 47180249 -206076334 + L1MB1 LINE L1 4529 5622 -546 1960 163 86 32 chr2 47180249 47180582 -206076001 + MSTA LTR MaLR 1 361 -67 2432 97 0 3 chr2 47180582 47180893 -206075690 - AluSg SINE Alu 0 310 1 1960 163 86 32 chr2 47180893 47180965 -206075618 + MSTA LTR MaLR 361 428 0 4306 162 10 30 chr2 47180965 47181055 -206075528 + L1MB1 LINE L1 5622 5712 -456 1000 159 6 31 chr2 47181055 47181218 -206075365 - MER1B DNA MER1_type -124 173 15 2225 141 50 21 chr2 47181218 47181637 -206074946 + L1MB1 LINE L1 5736 6166 -2 263 262 0 0 chr2 47182585 47182646 -206073937 + MIR SINE MIR 39 99 -109 437 248 69 14 chr2 47182926 47183071 -206073512 + MIR SINE MIR 108 260 -2 225 0 0 0 chr2 47184017 47184042 -206072541 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 388 300 0 0 chr2 47184798 47184898 -206071685 + MIR3 SINE MIR 109 208 0 424 298 115 5 chr2 47184985 47185203 -206071380 - MIR SINE MIR 0 262 21 2005 147 43 100 chr2 47185265 47185734 -206070849 + L1MB4 LINE L1 5715 6156 -24 2064 113 0 7 chr2 47185751 47186042 -206070541 + AluSp SINE Alu 1 289 -24 22 35 0 0 chr2 47186045 47186074 -206070509 + AT_rich Low_complexity Low_complexity 1 29 0 213 361 55 25 chr2 47186079 47186281 -206070302 - MIR SINE MIR -12 250 43 3161 106 82 0 chr2 47186886 47187359 -206069224 - MER75 DNA T2_type -2 512 1 577 306 65 16 chr2 47187794 47188042 -206068541 + MIR SINE MIR 2 261 -1 4704 159 27 26 chr2 47188311 47189146 -206067437 - L1MB8 LINE L1 -1 6177 5330 1960 137 13 33 chr2 47189146 47189452 -206067131 - AluJb SINE Alu -12 300 1 4704 159 27 26 chr2 47189452 47189636 -206066947 - L1MB8 LINE L1 -848 5330 5148 273 322 56 47 chr2 47189665 47190181 -206066402 + L1M4 LINE L1 4181 4701 -1445 350 327 62 12 chr2 47190198 47190360 -206066223 + MIR3 SINE MIR 30 199 -9 2203 135 33 28 chr2 47190808 47191170 -206065413 + THE1B LTR MaLR 1 364 0 2126 158 6 0 chr2 47193041 47193376 -206063207 + MER1B DNA MER1_type 1 337 0 1443 213 95 32 chr2 47193646 47194079 -206062504 - MLT1C LTR MaLR 0 467 8 620 189 0 19 chr2 47194627 47194733 -206061850 + MLT1E LTR MaLR 15 118 -475 1997 149 70 6 chr2 47194747 47195090 -206061493 - MLT1A1 LTR MaLR 0 365 1 569 231 63 93 chr2 47195093 47195553 -206061030 - LTR48B LTR ERV1 -11 596 126 371 204 126 39 chr2 47195524 47195627 -206060956 - MER34 LTR ERV1 -430 112 1 * 831 262 71 34 chr2 47195784 47196078 -206060505 + Charlie2b DNA MER1_type 1 305 -2477 7841 120 10 4 chr2 47196090 47197385 -206059198 - HSMAR2 DNA Mariner 0 1302 1 558 185 69 23 chr2 47197408 47197538 -206059045 + Charlie2b DNA MER1_type 534 669 -2113 3095 217 132 21 chr2 47197679 47197758 -206058825 + Charlie2a DNA MER1_type 1550 1619 -1243 180 0 0 0 chr2 47197758 47197778 -206058805 + (TG)n Simple_repeat Simple_repeat 2 21 0 3095 217 132 21 chr2 47197778 47198380 -206058203 + Charlie2a DNA MER1_type 1619 2153 -709 2175 91 0 0 chr2 47198380 47198667 -206057916 + AluSc SINE Alu 1 287 -22 3095 217 132 21 chr2 47198667 47199094 -206057489 + Charlie2a DNA MER1_type 2153 2782 -80 234 208 0 0 chr2 47199505 47199558 -206057025 + (CA)n Simple_repeat Simple_repeat 1 53 0 181 211 18 35 chr2 47200533 47200590 -206055993 + L2 LINE L2 3053 3108 -164 565 218 199 0 chr2 47202127 47202283 -206054300 - MIR SINE MIR -13 249 63 2052 116 0 0 chr2 47202561 47202846 -206053737 + AluSx SINE Alu 1 285 -27 870 119 0 0 chr2 47202846 47202980 -206053603 + (TA)n Simple_repeat Simple_repeat 2 135 0 1823 53 0 0 chr2 47203418 47203643 -206052940 + L1PA8 LINE L1 5948 6172 0 953 161 19 0 chr2 47205768 47205929 -206050654 - MER69A DNA AcHobo -13 164 1 2021 99 0 64 chr2 47206194 47206508 -206050075 + AluSq SINE Alu 1 294 -19 1467 148 32 25 chr2 47206529 47206813 -206049770 + L1MA6 LINE L1 6015 6300 0 656 301 72 32 chr2 47207011 47207916 -206048667 + L1M4 LINE L1 3767 4701 -1445 441 257 128 14 chr2 47208579 47208875 -206047708 + L1M4 LINE L1 4728 5057 -1089 400 256 103 13 chr2 47208896 47209132 -206047451 + L1M4 LINE L1 5110 5372 -779 6744 67 19 10 chr2 47209132 47210040 -206046543 + L1PA8 LINE L1 5257 6172 0 400 256 103 13 chr2 47210040 47210078 -206046505 + L1M4 LINE L1 5372 5405 -746 2573 243 45 24 chr2 47210145 47211132 -206045451 - L1MCc LINE L1 -4740 2201 1200 1073 283 99 35 chr2 47211146 47211633 -206044950 + MLT1L LTR MaLR 1 518 -97 433 359 78 34 chr2 47211893 47212188 -206044395 + L2 LINE L2 2965 3272 0 185 351 76 56 chr2 47212468 47212719 -206043864 - L2 LINE L2 -470 2844 2589 1966 119 0 16 chr2 47212790 47213093 -206043490 + AluSx SINE Alu 6 303 -9 349 196 179 36 chr2 47214345 47214457 -206042126 - MER5B DNA MER1_type -50 128 1 250 211 19 0 chr2 47214457 47214506 -206042077 + MIR3 SINE MIR 153 202 -6 358 282 55 0 chr2 47214616 47214726 -206041857 + MER117 DNA MER1_type 46 161 -36 608 209 241 27 chr2 47214821 47215300 -206041283 - MLT1H LTR MaLR -2 553 1 204 200 33 17 chr2 47215438 47215498 -206041085 + (CATATA)n Simple_repeat Simple_repeat 3 63 0 22 56 0 0 chr2 47215678 47215714 -206040869 + AT_rich Low_complexity Low_complexity 1 36 0 355 290 137 24 chr2 47216357 47216481 -206040102 - L2 LINE L2 -2 3270 3133 1070 250 20 12 chr2 47216526 47216778 -206039805 - MIR SINE MIR 0 262 9 262 277 170 0 chr2 47217234 47217346 -206039237 - MIR SINE MIR -122 140 10 258 350 195 0 chr2 47217505 47217628 -206038955 + MIR3 SINE MIR 30 176 -32 200 264 28 28 chr2 47218338 47218410 -206038173 - MIR3 SINE MIR -133 75 4 1551 260 22 23 chr2 47218583 47219124 -206037459 + L2 LINE L2 2771 3310 -3 195 263 97 91 chr2 47221764 47221950 -206034633 - MIR SINE MIR -55 207 21 221 342 43 0 chr2 47221961 47222078 -206034505 + MIR SINE MIR 27 148 -60 349 200 56 33 chr2 47223744 47223834 -206032749 - L2 LINE L2 -1 3271 3180 852 199 0 0 chr2 47223847 47223998 -206032585 + FRAM SINE Alu 11 161 -15 284 281 88 107 chr2 47223999 47224262 -206032321 - L2 LINE L2 -85 3187 2930 506 301 0 0 chr2 47225606 47225909 -206030674 + CT-rich Low_complexity Low_complexity 1 303 0 1026 181 81 136 chr2 47227438 47227930 -206028653 + MER4C LTR ERV1 1 465 0 2101 166 3 3 chr2 47228412 47228756 -206027827 - MER2 DNA MER2_type 0 344 1 1965 131 0 0 chr2 47228760 47229051 -206027532 - AluSx SINE Alu -13 299 9 347 262 78 7 chr2 47229428 47229569 -206027014 - MER103 DNA DNA -1 165 15 1774 117 80 0 chr2 47229703 47229977 -206026606 - AluSx SINE Alu -16 296 1 912 237 201 34 chr2 47230078 47230516 -206026067 + MLT1H LTR MaLR 23 533 -16 680 329 71 4 chr2 47230554 47230779 -206025804 + MIR SINE MIR 20 259 -3 430 319 126 10 chr2 47233329 47233536 -206023047 - MIR SINE MIR -30 232 2 189 256 0 23 chr2 47233537 47233580 -206023003 + MIR3 SINE MIR 134 175 -33 258 185 37 0 chr2 47235314 47235368 -206021215 + MIR3 SINE MIR 101 156 -52 490 272 33 56 chr2 47235368 47235548 -206021035 + MER5B DNA MER1_type 3 178 0 317 159 16 0 chr2 47236340 47236403 -206020180 + CT-rich Low_complexity Low_complexity 1 64 0 1838 148 29 101 chr2 47237943 47238346 -206018237 + MLT2D LTR ERVL 1 371 -43 264 30 0 0 chr2 47238346 47238379 -206018204 + (CA)n Simple_repeat Simple_repeat 1 33 0 1838 148 29 101 chr2 47238379 47238421 -206018162 + MLT2D LTR ERVL 371 414 0 237 278 71 24 chr2 47239231 47239357 -206017226 - MLT1K LTR MaLR -2 586 455 1027 158 0 113 chr2 47239524 47239771 -206016812 + AluJb SINE Alu 1 219 -93 222 37 0 0 chr2 47239827 47239854 -206016729 + (GGA)n Simple_repeat Simple_repeat 2 28 0 243 277 0 68 chr2 47240057 47240152 -206016431 - MER5A DNA MER1_type 0 189 91 216 250 103 86 chr2 47240063 47240179 -206016404 + MER5A DNA MER1_type 21 138 -51 * 566 298 50 11 chr2 47240426 47240607 -206015976 - MIR SINE MIR -12 250 63 327 343 14 43 chr2 47240617 47240757 -206015826 + L2 LINE L2 3134 3269 -3 211 338 0 12 chr2 47241819 47241899 -206014684 + MIR SINE MIR 17 95 -167 401 229 138 9 chr2 47242130 47242239 -206014344 + MIR SINE MIR 24 146 -116 353 221 84 11 chr2 47242268 47242363 -206014220 - L1M LINE L1 -754 5367 5266 299 237 144 49 chr2 47242987 47243152 -206013431 - MIR SINE MIR -56 206 31 250 180 0 0 chr2 47243156 47243206 -206013377 - L2 LINE L2 -2 3311 3262 185 200 71 86 chr2 47246823 47246893 -206009690 - MER5A DNA MER1_type -5 184 116 * 198 266 97 18 chr2 47246848 47246961 -206009622 + MER5B DNA MER1_type 31 152 -26 543 225 51 22 chr2 47247536 47247674 -206008909 + MIR SINE MIR 6 147 -115 511 224 13 17 chr2 47247688 47247848 -206008735 - MLT1I LTR MaLR -6 428 291 208 327 47 9 chr2 47248067 47248174 -206008409 + MIR SINE MIR 142 252 -10 227 279 0 15 chr2 47248562 47248630 -206007953 + MIR SINE MIR 121 187 -75 374 275 9 37 chr2 47249344 47249453 -206007130 - MIR SINE MIR 0 262 157 653 241 159 60 chr2 47249467 47249921 -206006662 + MLT1H LTR MaLR 1 555 0 333 297 10 10 chr2 47249921 47250022 -206006561 - MIR SINE MIR -116 146 46 1333 157 107 21 chr2 47250485 47250727 -206005856 - AluJo SINE Alu -49 263 1 2059 162 0 6 chr2 47251247 47251561 -206005022 - AluSx SINE Alu 0 312 1 305 289 0 0 chr2 47252868 47252944 -206003639 - MLT1A1 LTR MaLR -143 222 147 813 158 8 0 chr2 47253735 47253855 -206002728 + FLAM_C SINE Alu 1 121 -22 204 97 0 0 chr2 47253855 47253886 -206002697 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 2651 99 6 3 chr2 47254438 47254792 -206001791 + THE1A LTR MaLR 1 355 0 389 94 0 0 chr2 47254792 47254845 -206001738 + THE1A-int LTR MaLR 1 53 -1527 499 33 0 0 chr2 47254845 47254906 -206001677 + THE1A-int LTR MaLR 22 82 -1498 2121 96 34 25 chr2 47254906 47255259 -206001324 + MLT2A1 LTR ERVL 89 444 0 577 155 0 43 chr2 47255416 47255532 -206001051 + MER53 DNA DNA 1 111 -78 219 309 12 24 chr2 47255593 47255677 -206000906 + L3 LINE CR1 1489 1571 -6 424 374 12 6 chr2 47256654 47256820 -205999763 + MIR SINE MIR 34 200 -62 1560 164 31 13 chr2 47256910 47257228 -205999355 + MER33 DNA MER1_type 1 324 0 339 273 27 31 chr2 47257472 47257595 -205998988 - MIR3 SINE MIR -21 187 65 243 394 84 36 chr2 47258224 47258475 -205998108 - L2 LINE L2 -65 3207 2945 2160 111 38 0 chr2 47258610 47258898 -205997685 - AluSx SINE Alu -13 299 1 212 266 86 70 chr2 47258955 47259083 -205997500 - MIR SINE MIR -70 192 63 207 261 0 22 chr2 47259300 47259346 -205997237 + L2 LINE L2 3238 3282 -31 2216 120 3 0 chr2 47259598 47259899 -205996684 - AluSx SINE Alu -4 308 7 1386 142 47 24 chr2 47260019 47260315 -205996268 + MER33 DNA MER1_type 22 324 0 621 0 0 0 chr2 47260744 47260813 -205995770 + (GA)n Simple_repeat Simple_repeat 1 69 0 211 317 178 0 chr2 47261157 47261258 -205995325 + L2 LINE L2 3143 3261 -11 595 279 13 32 chr2 47265791 47265949 -205990634 + MIR SINE MIR 105 259 -3 703 182 164 13 chr2 47266166 47266325 -205990258 - MER5A DNA MER1_type -6 183 1 383 245 32 0 chr2 47266335 47266429 -205990154 + L2 LINE L2 3207 3303 -10 733 124 11 40 chr2 47266842 47267019 -205989564 + (TTTC)n Simple_repeat Simple_repeat 3 174 0 517 207 0 9 chr2 47267605 47267721 -205988862 - L1MD3 LINE L1 -124 7871 7757 288 344 23 8 chr2 47268086 47268217 -205988366 + MIR3 SINE MIR 43 175 -33 2568 219 93 27 chr2 47269201 47269940 -205986643 - MER21B LTR ERV1 -57 806 19 372 207 9 95 chr2 47269938 47270054 -205986529 - MER21B LTR ERV1 -757 106 1 * 201 154 0 0 chr2 47270409 47270448 -205986135 + (TG)n Simple_repeat Simple_repeat 1 39 0 224 255 0 0 chr2 47270492 47270543 -205986040 + A-rich Low_complexity Low_complexity 1 51 0 237 262 121 64 chr2 47270912 47271053 -205985530 - MER5B DNA MER1_type -13 165 17 2425 90 0 13 chr2 47271561 47271871 -205984712 + AluY SINE Alu 1 306 -5 1020 211 56 17 chr2 47271872 47272104 -205984479 + MIR SINE MIR 22 262 0 186 236 0 0 chr2 47275406 47275461 -205981122 + (TGGA)n Simple_repeat Simple_repeat 1 55 0 258 247 62 93 chr2 47275515 47275677 -205980906 - L2 LINE L2 -8 3305 3149 1036 83 15 0 chr2 47275677 47275809 -205980774 + AluSq SINE Alu 1 134 -178 430 245 0 32 chr2 47275811 47275905 -205980678 + L1MC4 LINE L1 6614 6704 -1338 320 221 32 74 chr2 47275907 47276002 -205980581 + L1MC4 LINE L1 6614 6704 -1338 * 326 250 45 23 chr2 47275968 47276056 -205980527 - L1MC4 LINE L1 -1339 6703 6614 * 389 244 23 0 chr2 47276004 47276090 -205980493 + L1MC4 LINE L1 6614 6701 -1341 369 0 0 0 chr2 47276090 47276131 -205980452 + (CA)n Simple_repeat Simple_repeat 2 42 0 1328 105 0 0 chr2 47276131 47276303 -205980280 + AluSq SINE Alu 132 303 -10 3965 223 171 84 chr2 47276304 47277456 -205979127 - L2 LINE L2 -151 3162 2111 474 158 0 0 chr2 47277456 47277538 -205979045 + AluSp/q SINE Alu 227 308 -5 3965 223 171 84 chr2 47277538 47278291 -205978292 - L2 LINE L2 -1202 2111 1005 269 323 47 55 chr2 47279031 47279158 -205977425 + L2 LINE L2 3188 3313 0 * 342 294 171 35 chr2 47279155 47279383 -205977200 - MIR SINE MIR 0 262 4 230 274 159 72 chr2 47279855 47279909 -205976674 + MLT1J LTR MaLR 149 197 -314 819 209 181 0 chr2 47279909 47280091 -205976492 + MER20 DNA MER1_type 3 217 -2 230 274 159 72 chr2 47280091 47280213 -205976370 + MLT1J LTR MaLR 197 307 -204 2132 132 3 6 chr2 47280213 47280524 -205976059 + AluSg SINE Alu 1 310 0 230 274 159 72 chr2 47280524 47280623 -205975960 + MLT1J LTR MaLR 307 449 -62 2232 179 37 47 chr2 47280772 47281280 -205975303 + MLT1D LTR MaLR 1 503 -2 208 295 74 41 chr2 47282266 47282388 -205974195 - MIR3 SINE MIR -80 128 3 652 272 149 73 chr2 47282688 47283096 -205973487 + L2 LINE L2 2827 3265 -7 186 356 0 0 chr2 47283185 47283244 -205973339 + MIR SINE MIR 88 146 -116 254 306 74 50 chr2 47283253 47283374 -205973209 - L2 LINE L2 -8 3264 3141 2350 102 3 0 chr2 47283380 47283684 -205972899 + AluY SINE Alu 1 305 -6 665 273 12 8 chr2 47283739 47283992 -205972591 - L1M4 LINE L1 -1628 4518 4265 1135 96 32 0 chr2 47283996 47284153 -205972430 - L1PA13 LINE L1 0 6163 6002 268 337 104 26 chr2 47284191 47284461 -205972122 - L2 LINE L2 -173 3099 2809 1823 159 14 24 chr2 47286767 47287215 -205969368 - MLT1D LTR MaLR 0 505 1 508 243 161 48 chr2 47287351 47287791 -205968792 + L1ME4a LINE L1 5627 6116 -5 183 80 0 0 chr2 47288184 47288209 -205968374 + (A)n Simple_repeat Simple_repeat 1 25 0 248 289 36 67 chr2 47288287 47288481 -205968102 + L1ME4a LINE L1 5488 5675 -446 394 239 60 18 chr2 47288490 47288657 -205967926 + L1ME4a LINE L1 5776 5949 -172 2469 163 36 7 chr2 47290116 47290528 -205966055 + MSTB LTR MaLR 3 426 0 915 219 99 76 chr2 47291079 47291421 -205965162 - MER41B LTR ERV1 -29 606 257 225 246 0 33 chr2 47292049 47292110 -205964473 + GA-rich Low_complexity Low_complexity 6 64 0 252 320 7 3 chr2 47293180 47293331 -205963252 + MIR SINE MIR 58 259 -3 1964 133 23 10 chr2 47293333 47293633 -205962950 - AluSx SINE Alu -8 304 1 354 316 38 80 chr2 47293804 47294016 -205962567 + MIR SINE MIR 60 262 0 195 139 0 0 chr2 47296233 47296269 -205960314 + (CA)n Simple_repeat Simple_repeat 1 36 0 251 331 30 23 chr2 47298719 47298852 -205957731 + MIR3 SINE MIR 40 173 -35 590 237 171 7 chr2 47298865 47299017 -205957566 - MER5B DNA MER1_type 0 178 2 25 31 0 0 chr2 47300152 47300184 -205956399 + AT_rich Low_complexity Low_complexity 1 32 0 446 262 21 14 chr2 47300223 47300368 -205956215 + L1ME4a LINE L1 5955 6100 -21 329 184 0 13 chr2 47301061 47301137 -205955446 + CT-rich Low_complexity Low_complexity 2 76 0 325 279 20 113 chr2 47301685 47301932 -205954651 - MIR SINE MIR -10 252 29 706 303 88 7 chr2 47302621 47302905 -205953678 + L3 LINE CR1 1269 1575 -2 220 261 6 22 chr2 47304108 47304198 -205952385 + MIR SINE MIR 94 181 -62 298 133 0 0 chr2 47304692 47304737 -205951846 + MIR SINE MIR 99 143 -119 2177 156 21 16 chr2 47304904 47305277 -205951306 - THE1C LTR MaLR 0 375 1 195 293 57 9 chr2 47306857 47306963 -205949620 + L2 LINE L2 2952 3062 -210 240 302 119 14 chr2 47307520 47307924 -205948659 + L2 LINE L2 2809 3313 0 913 158 0 13 chr2 47308125 47308277 -205948306 + MIR SINE MIR 113 262 0 231 61 0 0 chr2 47308958 47308991 -205947592 + (TG)n Simple_repeat Simple_repeat 1 33 0 304 250 83 0 chr2 47309364 47309436 -205947147 + L2 LINE L2 3228 3305 -8 708 206 40 29 chr2 47309484 47309659 -205946924 + MIR SINE MIR 1 177 -85 3091 187 14 16 chr2 47309862 47310100 -205946483 + L1MB5 LINE L1 5408 5645 -529 2174 154 39 14 chr2 47310100 47310456 -205946127 - MLT1A1 LTR MaLR 0 365 1 3091 187 14 16 chr2 47310456 47310795 -205945788 + L1MB5 LINE L1 5645 5984 -190 735 174 90 0 chr2 47310892 47311036 -205945547 + L1MB5 LINE L1 6018 6174 0 550 261 36 46 chr2 47311193 47311388 -205945195 - MIR SINE MIR -47 215 23 2454 75 7 0 chr2 47311867 47312174 -205944409 + AluSp SINE Alu 1 309 -4 824 290 43 52 chr2 47312804 47313152 -205943431 - L3 LINE CR1 -15 1562 1218 444 37 0 0 chr2 47316185 47316239 -205940344 + (CA)n Simple_repeat Simple_repeat 1 54 0 1348 178 89 126 chr2 47316554 47317037 -205939546 - MER4C LTR ERV1 0 465 1 2292 106 0 0 chr2 47317323 47317626 -205938957 + AluY SINE Alu 1 303 -8 209 286 0 0 chr2 47318518 47318560 -205938023 - L2 LINE L2 -17 3255 3214 180 235 0 0 chr2 47318633 47318667 -205937916 + L2 LINE L2 3153 3186 -86 2057 275 128 16 chr2 47319222 47320308 -205936275 + L2 LINE L2 2094 3309 -4 850 234 11 0 chr2 47322209 47322393 -205934190 + MER105 DNA DNA 18 203 -1 465 221 44 57 chr2 47322398 47322556 -205934027 - L1MC/D LINE L1 -2018 5790 5635 285 301 80 9 chr2 47322566 47322679 -205933904 + L2 LINE L2 3183 3303 -10 388 233 139 16 chr2 47323311 47323440 -205933143 - MIR SINE MIR -65 197 53 399 223 136 22 chr2 47323469 47323653 -205932930 - HAL1 LINE L1 -169 2338 2134 25 0 0 0 chr2 47323662 47323687 -205932896 + AT_rich Low_complexity Low_complexity 1 25 0 1643 259 25 29 chr2 47323714 47324232 -205932351 + L1ME3A LINE L1 5647 6162 -8 461 214 12 64 chr2 47324333 47324506 -205932077 - HAL1b LINE L1 -522 826 663 430 161 21 0 chr2 47324719 47324812 -205931771 + CT-rich Low_complexity Low_complexity 3 97 0 436 283 116 49 chr2 47324812 47325141 -205931442 - HAL1b LINE L1 -945 403 53 670 240 55 0 chr2 47325153 47325299 -205931284 + Charlie2b DNA MER1_type 2 155 -2627 5703 244 84 26 chr2 47325361 47327452 -205929131 + Charlie2b DNA MER1_type 315 2614 -168 1402 173 41 19 chr2 47327489 47327755 -205928828 - MER63C DNA MER1_type -406 524 253 385 248 89 91 chr2 47328048 47328264 -205928319 - L1MEc LINE L1 -4081 2315 2100 1516 140 27 23 chr2 47328264 47328521 -205928062 + AluJo SINE Alu 1 258 -54 385 248 89 91 chr2 47328521 47328538 -205928045 - L1MEc LINE L1 -4296 2100 2084 279 0 0 0 chr2 47328538 47328569 -205928014 + (CA)n Simple_repeat Simple_repeat 2 32 0 385 248 89 91 chr2 47328569 47328773 -205927810 - L1MEc LINE L1 -4312 2084 1878 1623 254 54 57 chr2 47328808 47329390 -205927193 - L1M4 LINE L1 -2470 3676 3095 2443 99 0 0 chr2 47329390 47329702 -205926881 - AluSx SINE Alu 0 312 1 1623 254 54 57 chr2 47329702 47329748 -205926835 - L1M4 LINE L1 -3051 3095 3050 423 241 86 57 chr2 47330191 47330557 -205926026 + L1MEc LINE L1 1299 1466 -4957 424 207 0 0 chr2 47330567 47330654 -205925929 + L1MA10 LINE L1 6229 6315 -19 570 334 133 8 chr2 47330669 47331031 -205925552 + HAL1 LINE L1 1472 1878 -629 257 324 0 49 chr2 47331434 47331576 -205925007 + HAL1b LINE L1 746 880 -468 200 122 24 0 chr2 47331578 47331619 -205924964 + (TA)n Simple_repeat Simple_repeat 2 43 0 212 175 0 0 chr2 47331771 47331811 -205924772 + A-rich Low_complexity Low_complexity 1 40 0 1614 204 0 3 chr2 47332285 47332569 -205924014 + AluJb SINE Alu 2 284 -28 450 195 0 35 chr2 47332683 47332796 -205923787 + L1MB8 LINE L1 6070 6178 0 840 303 71 42 chr2 47333080 47333703 -205922880 + HAL1b LINE L1 15 655 -693 667 284 173 39 chr2 47333718 47334320 -205922263 + L1M4 LINE L1 3073 3593 -2553 2189 101 3 0 chr2 47334320 47334606 -205921977 + AluSx SINE Alu 20 306 -6 667 284 173 39 chr2 47334606 47335359 -205921224 + L1M4 LINE L1 3593 4614 -1532 315 344 68 0 chr2 47335434 47335684 -205920899 + L1M4 LINE L1 4747 5013 -1133 21 36 0 0 chr2 47335700 47335728 -205920855 + AT_rich Low_complexity Low_complexity 1 28 0 233 311 146 19 chr2 47336088 47336191 -205920392 - L1MEd LINE L1 -5491 628 513 279 211 11 42 chr2 47336221 47336316 -205920267 - L1M4 LINE L1 -3180 2966 2875 216 0 0 0 chr2 47336336 47336360 -205920223 + (T)n Simple_repeat Simple_repeat 1 24 0 194 309 25 12 chr2 47337164 47337245 -205919338 + L2 LINE L2 2579 2660 -654 1895 177 39 15 chr2 47337431 47337765 -205918818 - MER2 DNA MER2_type -2 342 1 3785 208 12 26 chr2 47338048 47338072 -205918511 + L1MB8 LINE L1 3673 3696 -2450 2785 120 38 38 chr2 47338072 47338497 -205918086 - MSTB LTR MaLR -1 425 1 3785 208 12 26 chr2 47338497 47338598 -205917985 + L1MB8 LINE L1 3696 3797 -2349 2718 153 75 9 chr2 47338598 47339036 -205917547 - MLT1C LTR MaLR 0 467 1 3785 208 12 26 chr2 47339036 47339793 -205916790 + L1MB8 LINE L1 3797 4544 -1602 2038 169 9 18 chr2 47339797 47340140 -205916443 + MER2 DNA MER2_type 6 345 0 4630 170 66 22 chr2 47340143 47340302 -205916281 + L1MB8 LINE L1 4545 4696 -1482 2211 124 7 0 chr2 47340302 47340608 -205915975 + AluSg SINE Alu 3 310 0 4630 170 66 22 chr2 47340608 47340782 -205915801 + L1MB8 LINE L1 4696 4861 -1317 351 38 48 286 chr2 47340782 47340887 -205915696 + MADE1 DNA Mariner 1 80 0 4630 170 66 22 chr2 47340887 47341304 -205915279 + L1MB8 LINE L1 4861 5258 -920 2326 97 0 3 chr2 47341304 47341602 -205914981 + AluSg SINE Alu 1 297 -13 4630 170 66 22 chr2 47341602 47342414 -205914169 + L1MB8 LINE L1 5258 6178 0 367 349 109 5 chr2 47344082 47344274 -205912309 - L2 LINE L2 -171 3101 2890 411 204 30 76 chr2 47344308 47344440 -205912143 + MER112 DNA MER1_type 4 129 -131 224 241 121 0 chr2 47346267 47346325 -205910258 + L2 LINE L2 3203 3267 -5 852 143 15 30 chr2 47346697 47346830 -205909753 - FLAM_C SINE Alu -2 131 1 347 308 63 63 chr2 47346834 47347115 -205909468 - L1M4 LINE L1 -1443 4703 4420 2295 102 3 0 chr2 47347115 47347408 -205909175 - AluSc SINE Alu -15 294 1 347 308 63 63 chr2 47347408 47347425 -205909158 - L1M4 LINE L1 -1725 4421 4405 331 337 0 0 chr2 47347530 47347619 -205908964 - L2 LINE L2 0 3313 3225 2022 194 72 13 chr2 47348117 47348586 -205907997 + L2 LINE L2 2135 2631 -683 3141 258 92 27 chr2 47348588 47348628 -205907955 + L2 LINE L2 688 724 -2590 1458 156 148 0 chr2 47348628 47348878 -205907705 - AluJo SINE Alu -12 290 4 3141 258 92 27 chr2 47348878 47349929 -205906654 + L2 LINE L2 724 1851 -1463 238 257 9 64 chr2 47350069 47350178 -205906405 + L2 LINE L2 3134 3236 -77 287 270 0 45 chr2 47350211 47350300 -205906283 + L2 LINE L2 3185 3269 -3 249 337 11 0 chr2 47350313 47350402 -205906181 - MIR SINE MIR -65 143 54 439 195 12 0 chr2 47351033 47351115 -205905468 + MER94 DNA DNA 6 88 -46 299 219 37 49 chr2 47353167 47353249 -205903334 - L2 LINE L2 -8 3264 3184 401 290 77 35 chr2 47355649 47355818 -205900765 + MIR SINE MIR 22 197 -65 2343 81 7 0 chr2 47356306 47356601 -205899982 - AluY SINE Alu -14 297 1 450 246 130 0 chr2 47358958 47359096 -205897487 - MIR SINE MIR -21 241 86 1562 152 57 39 chr2 47360536 47360819 -205895764 - AluJo SINE Alu -23 289 2 243 257 164 26 chr2 47362020 47362172 -205894411 + MARNA DNA Mariner 259 431 -155 218 311 0 14 chr2 47362417 47362491 -205894092 - MIR SINE MIR -68 140 68 199 350 98 6 chr2 47363013 47363175 -205893408 - MIR SINE MIR -50 212 39 690 164 212 21 chr2 47363609 47363798 -205892785 - MIR SINE MIR 0 262 38 578 183 16 24 chr2 47364089 47364215 -205892368 + FLAM_A SINE Alu 2 126 -7 238 252 196 37 chr2 47366381 47366488 -205890095 - L2 LINE L2 0 3272 3149 633 254 198 0 chr2 47367070 47367318 -205889265 - L2 LINE L2 -847 2467 2171 1417 281 122 21 chr2 47367331 47368176 -205888407 + L2 LINE L2 2373 3311 -2 211 341 76 63 chr2 47368294 47368611 -205887972 - L2 LINE L2 -908 2406 2086 609 253 120 17 chr2 47369943 47370176 -205886407 + MIR SINE MIR 2 258 -4 219 315 56 37 chr2 47370420 47370528 -205886055 + L2 LINE L2 3184 3293 -20 31 0 0 0 chr2 47370791 47370822 -205885761 + AT_rich Low_complexity Low_complexity 1 31 0 319 0 0 0 chr2 47371279 47371314 -205885269 - U2 snRNA snRNA -153 35 1 329 302 121 0 chr2 47371543 47371659 -205884924 + L1ME LINE L1 5529 5658 -463 1841 118 21 18 chr2 47371862 47372141 -205884442 + AluJb SINE Alu 1 280 -32 23 0 0 0 chr2 47372318 47372341 -205884242 + AT_rich Low_complexity Low_complexity 1 23 0 1417 237 46 50 chr2 47372352 47372850 -205883733 + L1ME2 LINE L1 4065 4560 -1586 2501 201 83 49 chr2 47372869 47373409 -205883174 + L1ME2 LINE L1 5188 5782 -382 3705 164 81 45 chr2 47373409 47374241 -205882342 + MER21B LTR ERV1 1 862 -1 2501 201 83 49 chr2 47374241 47374628 -205881955 + L1ME2 LINE L1 5782 6154 -10 269 257 37 92 chr2 47374677 47374750 -205881833 + L1MC4 LINE L1 7836 7911 -131 1679 163 33 7 chr2 47374750 47375063 -205881520 + AluSx SINE Alu 1 320 0 269 257 37 92 chr2 47375063 47375206 -205881377 + L1MC4 LINE L1 7911 8041 -1 261 212 0 30 chr2 47376361 47376427 -205880156 + MLT1L LTR MaLR 548 611 -4 865 282 72 51 chr2 47376445 47376573 -205880010 + HAL1 LINE L1 1246 1370 -1137 2144 113 0 13 chr2 47376573 47376882 -205879701 + AluSx SINE Alu 7 311 -1 865 282 72 51 chr2 47376882 47377263 -205879320 + HAL1 LINE L1 1370 1766 -741 253 138 12 50 chr2 47377316 47377396 -205879187 + (TA)n Simple_repeat Simple_repeat 1 77 0 321 273 0 70 chr2 47377396 47377568 -205879015 + (TG)n Simple_repeat Simple_repeat 2 161 0 * 376 270 40 29 chr2 47377468 47377642 -205878941 + (TATG)n Simple_repeat Simple_repeat 3 178 0 * 448 245 0 62 chr2 47377589 47377847 -205878736 + (TA)n Simple_repeat Simple_repeat 1 241 0 225 194 21 75 chr2 47377859 47377952 -205878631 + L1MC4 LINE L1 6615 6702 -1340 304 206 0 61 chr2 47377953 47378133 -205878450 + (TATATG)n Simple_repeat Simple_repeat 2 170 0 311 194 0 55 chr2 47378133 47378355 -205878228 + (TA)n Simple_repeat Simple_repeat 1 209 0 247 211 13 13 chr2 47378417 47378493 -205878090 + (TATATG)n Simple_repeat Simple_repeat 5 80 0 31 58 0 0 chr2 47378495 47378547 -205878036 + AT_rich Low_complexity Low_complexity 1 52 0 1323 67 0 0 chr2 47378564 47378743 -205877840 + (GGAGA)n Simple_repeat Simple_repeat 1 179 0 337 256 44 44 chr2 47379365 47379545 -205877038 + L1MC4a LINE L1 5746 5925 -1883 1733 117 0 16 chr2 47379692 47379940 -205876643 - AluSx SINE Alu -8 304 61 299 271 107 65 chr2 47380099 47380409 -205876174 - L1M4 LINE L1 -1082 5064 4742 845 303 118 30 chr2 47380742 47381148 -205875435 + L2 LINE L2 2823 3264 -49 225 318 0 0 chr2 47381598 47381683 -205874900 + A-rich Low_complexity Low_complexity 1 85 0 820 144 103 0 chr2 47383071 47383217 -205873366 - MER5A DNA MER1_type 0 189 29 2198 188 60 103 chr2 47383331 47383782 -205872801 - HsTC2a DNA Tc2 -1161 739 270 677 33 0 33 chr2 47383782 47383874 -205872709 - L1PA5 LINE L1 0 6154 6066 2198 188 60 103 chr2 47383874 47384147 -205872436 - HsTC2a DNA Tc2 -1630 270 47 2414 90 0 0 chr2 47384147 47384458 -205872125 + AluY SINE Alu 1 311 0 2198 188 60 103 chr2 47384458 47384502 -205872081 - HsTC2a DNA Tc2 -1853 47 3 374 228 89 0 chr2 47385328 47385429 -205871154 - MER112 DNA MER1_type -2 258 149 264 256 11 44 chr2 47386120 47386210 -205870373 + L1ME LINE L1 5444 5530 -634 1351 185 63 24 chr2 47386379 47386758 -205869825 + L1 LINE L1 3389 3782 -2364 557 250 25 120 chr2 47386859 47387143 -205869440 - L1MC4 LINE L1 0 7847 7552 444 205 0 0 chr2 47387151 47387229 -205869354 + MLT1F LTR MaLR 1 78 -464 323 278 19 93 chr2 47387860 47388076 -205868507 + MLT1L LTR MaLR 383 582 -33 247 277 72 0 chr2 47388161 47388244 -205868339 - MIR SINE MIR -7 255 167 342 182 11 23 chr2 47388339 47388427 -205868156 + L1ME LINE L1 5736 5822 -299 12668 78 5 37 chr2 47388437 47390204 -205866379 + L1P3 LINE L1 1 1710 -4751 2072 95 7 0 chr2 47390204 47390509 -205866074 + L1P3 LINE L1 2458 2764 -3697 1676 98 0 0 chr2 47390504 47390739 -205865844 + L1P3 LINE L1 3923 4157 -2304 * 20012 91 36 16 chr2 47390740 47391205 -205865378 + L1PA7 LINE L1 2457 2911 -3243 2205 48 0 8 chr2 47391205 47391523 -205865060 + AluY SINE Alu 16 331 0 20012 91 36 16 chr2 47391523 47394708 -205861875 + L1PA7 LINE L1 2911 6151 -3 2030 110 7 0 chr2 47394925 47395250 -205861333 - AluSp SINE Alu 0 327 1 264 308 8 58 chr2 47395355 47395475 -205861108 - L2 LINE L2 0 3272 3159 23 0 0 0 chr2 47395697 47395720 -205860863 + AT_rich Low_complexity Low_complexity 1 23 0 738 249 29 0 chr2 47396136 47396341 -205860242 + L1MA8 LINE L1 6080 6290 -1 3438 56 0 7 chr2 47397693 47398142 -205858441 - L1PA6 LINE L1 -1 6153 5708 478 355 43 34 chr2 47398160 47398487 -205858096 + L1MEc LINE L1 148 477 -5919 4869 217 71 26 chr2 47398704 47399366 -205857217 + L1M4 LINE L1 3510 4141 -2005 1887 160 41 22 chr2 47399366 47399734 -205856849 - THE1C LTR MaLR 0 375 1 4869 217 71 26 chr2 47399734 47400502 -205856081 + L1M4 LINE L1 4141 5004 -1142 851 236 0 0 chr2 47400502 47400667 -205855916 + AluSg/x SINE Alu 134 298 -12 607 215 37 6 chr2 47400682 47400845 -205855738 + L1M4 LINE L1 4990 5157 -989 1163 187 89 4 chr2 47400850 47401107 -205855476 + L1MC1 LINE L1 6046 6324 -9 1793 268 120 57 chr2 47401156 47402657 -205853926 + L1MEc LINE L1 707 2301 -4095 186 208 0 0 chr2 47403711 47403759 -205852824 + GA-rich Low_complexity Low_complexity 1 48 0 232 278 28 42 chr2 47404480 47404552 -205852031 + L2 LINE L2 3242 3312 -1 823 298 121 61 chr2 47405899 47406550 -205850033 - L2 LINE L2 -412 2902 2213 1218 184 9 5 chr2 47407045 47407262 -205849321 + AluJo SINE Alu 1 218 -94 261 0 0 0 chr2 47408472 47408501 -205848082 + (A)n Simple_repeat Simple_repeat 1 29 0 677 249 76 56 chr2 47409499 47409892 -205846691 + HAL1 LINE L1 1280 1680 -827 2222 94 7 3 chr2 47410090 47410389 -205846194 + AluSc SINE Alu 1 300 -9 478 299 140 18 chr2 47411082 47411246 -205845337 + MIR SINE MIR 18 201 -61 250 85 21 21 chr2 47416186 47416233 -205840350 + (GAAAA)n Simple_repeat Simple_repeat 3 49 0 24 0 0 0 chr2 47418676 47418700 -205837883 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr2 47420940 47420963 -205835620 + AT_rich Low_complexity Low_complexity 1 23 0 239 241 17 17 chr2 47422387 47422445 -205834138 + L3 LINE CR1 1516 1573 -4 253 339 36 18 chr2 47422663 47422775 -205833808 - MIR SINE MIR -147 115 2 1690 60 0 56 chr2 47425523 47425757 -205830826 + AluY SINE Alu 71 291 -20 441 0 0 0 chr2 47427922 47427971 -205828612 + (CA)n Simple_repeat Simple_repeat 2 50 0 1907 146 36 15 chr2 47427972 47428307 -205828276 + MER2 DNA MER2_type 2 343 -1 204 179 0 0 chr2 47428307 47428346 -205828237 + (TA)n Simple_repeat Simple_repeat 1 39 0 387 199 154 59 chr2 47428909 47429045 -205827538 - L2 LINE L2 0 3313 3165 237 263 300 0 chr2 47429706 47429786 -205826797 - MER5A DNA MER1_type -13 176 73 338 244 230 15 chr2 47429817 47429952 -205826631 + MER5A DNA MER1_type 25 188 -1 555 296 0 14 chr2 47429982 47430124 -205826459 - MER5A DNA MER1_type -49 140 1 421 265 73 53 chr2 47430120 47430271 -205826312 - MER5B DNA MER1_type -1 177 24 * 770 288 81 31 chr2 47431077 47431310 -205825273 - L1ME3 LINE L1 -222 5940 5720 1867 158 3 3 chr2 47431310 47431607 -205824976 - AluJo SINE Alu -13 299 3 770 288 81 31 chr2 47431607 47432180 -205824403 - L1ME3 LINE L1 -442 5720 5092 322 262 187 51 chr2 47434375 47434669 -205821914 - L1ME LINE L1 -381 5740 5407 2157 178 105 35 chr2 47434877 47435393 -205821190 + L1MB8 LINE L1 5618 6169 -9 846 206 18 18 chr2 47435396 47435566 -205821017 - FAM SINE Alu -5 170 1 441 323 92 19 chr2 47435672 47435988 -205820595 - L1ME3 LINE L1 -3662 2484 2146 646 274 106 31 chr2 47436347 47436799 -205819784 - HAL1 LINE L1 -742 1765 1280 414 272 131 39 chr2 47436961 47437244 -205819339 - HAL1 LINE L1 -1379 1128 820 1101 250 182 11 chr2 47437960 47438404 -205818179 + L2 LINE L2 2267 2786 -528 2161 126 0 0 chr2 47438626 47438920 -205817663 - AluSx SINE Alu -18 294 1 375 324 56 7 chr2 47439086 47439228 -205817355 + MIR3 SINE MIR 57 205 -3 827 194 7 7 chr2 47440480 47440635 -205815948 - FRAM SINE Alu -21 155 1 12950 126 22 3 chr2 47441744 47443733 -205812850 + Tigger1 DNA MER2_type 1 2025 -393 2099 179 40 14 chr2 47443727 47444151 -205812432 + Tigger1 DNA MER2_type 1912 2346 -72 * 2887 147 42 16 chr2 47444492 47445064 -205811519 + L1MB7 LINE L1 5593 6179 -5 345 283 152 42 chr2 47445129 47445366 -205811217 + L1M4 LINE L1 4091 4353 -1793 418 216 29 0 chr2 47445368 47445470 -205811113 + L1MA9 LINE L1 5980 6084 -228 297 0 0 0 chr2 47445535 47445568 -205811015 + (CA)n Simple_repeat Simple_repeat 2 34 0 1265 139 20 0 chr2 47445662 47445864 -205810719 + MER2 DNA MER2_type 1 206 -139 344 197 21 99 chr2 47446816 47446958 -205809625 + L1ME1 LINE L1 6031 6161 -5 1396 269 143 75 chr2 47446962 47447503 -205809080 - HAL1 LINE L1 -1509 998 366 2714 174 37 15 chr2 47447503 47448043 -205808540 - L1MB5 LINE L1 -8 6166 5615 1396 269 143 75 chr2 47448043 47448427 -205808156 - HAL1 LINE L1 -2141 366 10 2093 81 7 21 chr2 47449367 47449684 -205806899 + AluY SINE Alu 1 313 0 280 295 76 0 chr2 47449702 47449807 -205806776 + MIR SINE MIR 137 249 -13 2148 93 7 0 chr2 47450560 47450873 -205805710 - AluSg1 SINE Alu 0 315 1 313 361 0 0 chr2 47452628 47452725 -205803858 - MIR SINE MIR -151 111 15 22 56 0 0 chr2 47454565 47454601 -205801982 + AT_rich Low_complexity Low_complexity 1 36 0 2066 128 3 0 chr2 47454750 47455040 -205801543 - AluSx SINE Alu -19 293 3 2372 71 0 3 chr2 47455352 47455660 -205800923 - AluY SINE Alu -4 307 1 190 210 22 81 chr2 47456106 47456180 -205800403 - MIR SINE MIR -94 114 54 2043 127 10 10 chr2 47456450 47456757 -205799826 + AluSq SINE Alu 1 307 -6 250 313 10 0 chr2 47456834 47456933 -205799650 + L1ME LINE L1 5561 5660 -461 21 89 0 0 chr2 47457047 47457103 -205799480 + AT_rich Low_complexity Low_complexity 1 56 0 250 310 0 0 chr2 47459317 47459430 -205797153 + A-rich Low_complexity Low_complexity 1 113 0 775 180 87 0 chr2 47460373 47460534 -205796049 - MER5A DNA MER1_type 0 189 15 452 175 86 19 chr2 47460534 47460674 -205795909 - L1MB8 LINE L1 -1 6177 6035 1782 92 127 0 chr2 47460676 47460936 -205795647 + AluSx SINE Alu 1 293 -19 1006 213 76 6 chr2 47460946 47461302 -205795281 - L1MB8 LINE L1 -640 5538 5164 7993 139 35 51 chr2 47461337 47463349 -205793234 - L1MA4 LINE L1 -12 6288 4325 1879 149 24 0 chr2 47463349 47463637 -205792946 - AluJb SINE Alu -17 295 1 7993 139 35 51 chr2 47463637 47464160 -205792423 - L1MA4 LINE L1 -1975 4325 3795 41 21 0 0 chr2 47464170 47464218 -205792365 + AT_rich Low_complexity Low_complexity 1 48 0 6624 98 16 3 chr2 47464237 47465177 -205791406 + L1P LINE L1 2 953 -5193 4589 49 3 12 chr2 47465177 47465765 -205790818 + L1PA5 LINE L1 5572 6154 0 715 219 7 13 chr2 47465770 47465921 -205790662 - AluJo SINE Alu -41 271 122 21 71 0 0 chr2 47466157 47466199 -205790384 + AT_rich Low_complexity Low_complexity 1 42 0 206 273 92 74 chr2 47468598 47468807 -205787776 - MIR SINE MIR -34 174 3 2184 111 3 9 chr2 47470357 47470672 -205785911 + AluSq SINE Alu 1 313 0 186 43 0 0 chr2 47470857 47470880 -205785703 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 24 77 0 0 chr2 47471043 47471095 -205785488 + AT_rich Low_complexity Low_complexity 1 52 0 2248 78 0 0 chr2 47472236 47472520 -205784063 + AluY SINE Alu 1 287 -24 438 20 0 0 chr2 47472520 47472571 -205784012 + (CA)n Simple_repeat Simple_repeat 2 52 0 1965 173 0 0 chr2 47472649 47472956 -205783627 - AluJo SINE Alu -5 307 1 242 51 0 51 chr2 47475976 47476015 -205780568 - tRNA-Cys-TGC tRNA tRNA -38 37 1 216 353 182 18 chr2 47476856 47477026 -205779557 + MIR SINE MIR 9 206 -56 788 257 129 0 chr2 47478123 47478333 -205778250 - MIR SINE MIR -10 252 16 506 248 0 47 chr2 47478413 47478542 -205778041 - MIR SINE MIR -133 129 7 23 33 0 0 chr2 47479041 47479071 -205777512 + AT_rich Low_complexity Low_complexity 1 30 0 274 303 30 10 chr2 47479448 47479547 -205777036 + HAL1b LINE L1 1210 1310 -38 325 222 33 33 chr2 47479816 47479906 -205776677 - L2 LINE L2 -33 3280 3191 541 273 76 17 chr2 47480346 47480518 -205776065 + HsTC2 DNA Tc2 509 690 -1208 529 247 82 39 chr2 47480523 47480634 -205775949 + HsTC2 DNA Tc2 1628 1733 -165 1400 197 24 31 chr2 47480634 47480924 -205775659 + AluJo SINE Alu 1 288 -24 529 247 82 39 chr2 47480924 47481067 -205775516 + HsTC2 DNA Tc2 1733 1893 -5 296 289 155 28 chr2 47481069 47481211 -205775372 - MIR SINE MIR -67 195 36 914 260 9 9 chr2 47482723 47482942 -205773641 - MIR SINE MIR -40 222 4 3582 142 72 24 chr2 47483363 47484096 -205772487 + LTR1B LTR ERV1 1 785 0 2423 142 11 93 chr2 47484163 47484208 -205772375 + L1MA8 LINE L1 5260 5307 -873 297 0 0 0 chr2 47484208 47484241 -205772342 + (CA)n Simple_repeat Simple_repeat 2 34 0 2423 142 11 93 chr2 47484241 47484632 -205771951 + L1MA8 LINE L1 5307 5641 -539 1830 152 0 10 chr2 47484632 47484921 -205771662 + AluJb SINE Alu 27 312 0 2423 142 11 93 chr2 47484921 47485054 -205771529 + L1MA8 LINE L1 5641 5783 -397 841 129 100 121 chr2 47485054 47485111 -205771472 + MER46A DNA MER2_type 2 59 -2672 1587 156 43 22 chr2 47485111 47485387 -205771196 - AluJb SINE Alu -18 294 13 841 129 100 121 chr2 47485387 47485495 -205771088 + MER46A DNA MER2_type 59 163 -2568 2328 134 60 29 chr2 47485495 47485912 -205770671 + Tigger2a DNA MER2_type 1 430 -4 841 129 100 121 chr2 47485912 47485985 -205770598 + MER46A DNA MER2_type 163 236 0 8592 217 39 20 chr2 47485997 47488395 -205768188 + L1MB7 LINE L1 2881 5325 -821 1151 146 73 20 chr2 47488401 47488647 -205767936 + L1MA8 LINE L1 6032 6290 -1 4150 156 54 30 chr2 47488719 47489555 -205767028 + L1MB7 LINE L1 5320 6175 -9 332 285 172 7 chr2 47489595 47489746 -205766837 + L1ME4a LINE L1 5727 5902 -268 316 319 38 32 chr2 47490311 47490468 -205766115 - L2 LINE L2 -180 3092 2935 971 251 68 8 chr2 47490507 47490742 -205765841 - MIR SINE MIR 0 262 14 21 0 0 0 chr2 47490976 47490997 -205765586 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr2 47492460 47492491 -205764092 + AT_rich Low_complexity Low_complexity 1 31 0 497 209 139 0 chr2 47493757 47493872 -205762711 + FLAM_A SINE Alu 1 131 -2 186 171 0 0 chr2 47495077 47495118 -205761465 + (CCA)n Simple_repeat Simple_repeat 2 42 0 618 292 251 32 chr2 47497915 47498408 -205758175 - L3 LINE CR1 -758 819 219 21 0 0 0 chr2 47499068 47499089 -205757494 + AT_rich Low_complexity Low_complexity 1 21 0 863 207 106 0 chr2 47499819 47500046 -205756537 + MER112 DNA MER1_type 1 251 -9 464 252 95 43 chr2 47500197 47500407 -205756176 + L2 LINE L2 3059 3279 -34 247 279 115 8 chr2 47501689 47501811 -205754772 + L1ME4a LINE L1 5942 6076 -45 864 283 74 55 chr2 47502365 47502982 -205753601 + L1MEd LINE L1 330 958 -5161 2291 104 0 0 chr2 47502982 47503280 -205753303 + AluSg SINE Alu 1 298 -12 1182 211 47 15 chr2 47503304 47503798 -205752785 + L1ME1 LINE L1 4991 5500 -666 7035 175 120 59 chr2 47503837 47505491 -205751092 - MER52A LTR ERV1 0 1755 1 1822 189 39 37 chr2 47505491 47505952 -205750631 + L1ME1 LINE L1 5516 5977 -189 648 213 0 7 chr2 47506819 47506955 -205749628 + Tigger7 DNA MER2_type 845 979 -1508 1655 91 0 9 chr2 47506955 47507176 -205749407 + AluY SINE Alu 85 303 -8 192 223 173 93 chr2 47507272 47507411 -205749172 - MIR SINE MIR -72 190 41 24 0 0 0 chr2 47507677 47507701 -205748882 + AT_rich Low_complexity Low_complexity 1 24 0 507 258 22 93 chr2 47507758 47507920 -205748663 - MIR SINE MIR -48 214 74 2496 80 0 6 chr2 47507920 47508233 -205748350 + AluY SINE Alu 1 311 0 507 258 22 93 chr2 47508233 47508301 -205748282 - MIR SINE MIR -188 74 3 22 56 0 0 chr2 47510076 47510112 -205746471 + AT_rich Low_complexity Low_complexity 1 36 0 59 53 0 0 chr2 47510958 47511052 -205745531 + AT_rich Low_complexity Low_complexity 1 94 0 255 263 98 30 chr2 47511099 47511396 -205745187 + L1 LINE L1 3076 3392 -2754 414 277 46 51 chr2 47511468 47511663 -205744920 + L1 LINE L1 3739 3932 -2214 1589 166 0 42 chr2 47512502 47512791 -205743792 + AluJb SINE Alu 13 289 -23 262 269 134 0 chr2 47513016 47513165 -205743418 + L1MDb LINE L1 1166 1334 -5075 841 237 75 49 chr2 47513199 47513671 -205742912 + L1MDb LINE L1 1339 2002 -4470 305 374 155 21 chr2 47514562 47514936 -205741647 - L2 LINE L2 -338 2976 2553 1464 186 106 37 chr2 47516977 47517327 -205739256 + MLT1A2 LTR MaLR 1 374 0 3799 117 15 39 chr2 47517584 47518026 -205738557 + LTR26 LTR ERV1 1 452 -151 1566 165 50 23 chr2 47518026 47518329 -205738254 + AluJo SINE Alu 1 311 -1 3799 117 15 39 chr2 47518329 47518410 -205738173 + LTR26 LTR ERV1 452 509 -94 2281 76 13 20 chr2 47518410 47518713 -205737870 - AluY SINE Alu -10 301 1 3799 117 15 39 chr2 47518713 47518806 -205737777 + LTR26 LTR ERV1 509 603 0 502 270 184 10 chr2 47519317 47519370 -205737213 + MIR SINE MIR 2 44 -218 2145 127 0 16 chr2 47519370 47519684 -205736899 - AluSx SINE Alu -3 309 1 502 270 184 10 chr2 47519684 47519826 -205736757 + MIR SINE MIR 44 231 -31 180 0 0 0 chr2 47519840 47519860 -205736723 + (CTG)n Simple_repeat Simple_repeat 1 20 0 405 371 45 20 chr2 47519885 47520130 -205736453 - L2 LINE L2 -218 3054 2804 257 252 159 66 chr2 47520880 47521031 -205735552 - Charlie8 DNA MER1_type -1946 471 307 740 210 0 0 chr2 47521105 47521229 -205735354 + FLAM_A SINE Alu 1 124 -9 21 0 0 0 chr2 47521235 47521256 -205735327 + AT_rich Low_complexity Low_complexity 1 21 0 2275 102 0 25 chr2 47521607 47521921 -205734662 - AluSp SINE Alu -7 306 1 493 289 175 35 chr2 47521933 47522389 -205734194 + L2 LINE L2 2458 2977 -337 1802 155 3 37 chr2 47522713 47523036 -205733547 + AluJb SINE Alu 1 312 0 443 312 102 12 chr2 47523367 47523589 -205732994 - MIR SINE MIR -2 260 19 1519 199 19 23 chr2 47523745 47524052 -205732531 + AluJo SINE Alu 1 306 -6 318 233 0 44 chr2 47524191 47524281 -205732302 - L1MC/D LINE L1 -1990 5818 5733 198 211 44 67 chr2 47524539 47524629 -205731954 + MIR SINE MIR 100 187 -75 23 0 0 0 chr2 47525080 47525103 -205731480 + AT_rich Low_complexity Low_complexity 1 23 0 2178 106 0 22 chr2 47525141 47525453 -205731130 - AluSg1 SINE Alu -4 305 1 380 313 154 14 chr2 47526084 47526298 -205730285 - MIR SINE MIR -12 250 7 7692 217 54 9 chr2 47526344 47527624 -205728959 + L1MB8 LINE L1 3096 4510 -1636 1407 213 0 0 chr2 47527624 47527863 -205728720 - MER8 DNA MER2_type 0 239 1 7692 217 54 9 chr2 47527863 47528708 -205727875 + L1MB8 LINE L1 4510 5316 -830 955 77 0 0 chr2 47528730 47528847 -205727736 - AluSq/x SINE Alu -195 117 1 2772 195 109 2 chr2 47528847 47529472 -205727111 + L1MB8 LINE L1 5306 5997 -177 498 206 28 14 chr2 47529477 47529618 -205726965 + L1MB8 LINE L1 6036 6178 0 28 29 0 0 chr2 47529742 47529777 -205726806 + AT_rich Low_complexity Low_complexity 1 35 0 28 48 0 0 chr2 47530084 47530126 -205726457 + AT_rich Low_complexity Low_complexity 1 42 0 1548 202 7 3 chr2 47530249 47530546 -205726037 + AluJb SINE Alu 1 298 -14 2079 135 16 0 chr2 47532105 47532409 -205724174 - 7SLRNA srpRNA srpRNA -6 314 6 26 0 0 0 chr2 47532518 47532544 -205724039 + AT_rich Low_complexity Low_complexity 1 26 0 489 309 9 19 chr2 47532676 47532886 -205723697 + HAL1b LINE L1 395 602 -746 1206 209 19 0 chr2 47532902 47533117 -205723466 + MER58A DNA MER1_type 1 219 -5 3831 227 82 49 chr2 47533422 47535229 -205721354 + L1M4 LINE L1 2 1910 -4736 941 129 0 7 chr2 47535229 47535384 -205721199 + L1MB2 LINE L1 6014 6167 -4 3831 227 82 49 chr2 47535384 47535640 -205720943 + L1M4 LINE L1 1910 2156 -4490 258 315 110 31 chr2 47535848 47535975 -205720608 + MIR3 SINE MIR 4 140 -68 705 251 59 16 chr2 47537848 47538035 -205718548 + MIR SINE MIR 1 195 -67 2124 117 7 0 chr2 47538629 47538920 -205717663 - AluSx SINE Alu -14 298 6 2173 151 60 42 chr2 47538952 47539038 -205717545 + Tigger2 DNA MER2_type 2280 2363 -355 207 0 0 0 chr2 47539038 47539061 -205717522 + (TCC)n Simple_repeat Simple_repeat 3 25 0 2173 151 60 42 chr2 47539061 47539404 -205717179 + Tigger2 DNA MER2_type 2363 2717 -1 185 283 50 33 chr2 47539529 47539589 -205716994 + L2 LINE L2 3241 3301 -12 1112 175 50 88 chr2 47541593 47541923 -205714660 + L1MA9 LINE L1 5970 6278 -34 23 0 0 0 chr2 47541923 47541946 -205714637 + AT_rich Low_complexity Low_complexity 1 23 0 380 265 109 8 chr2 47542329 47542639 -205713944 + L1MC4a LINE L1 5029 5374 -786 25 0 0 0 chr2 47542736 47542761 -205713822 + AT_rich Low_complexity Low_complexity 1 25 0 2113 100 0 50 chr2 47543260 47543580 -205713003 - AluSc SINE Alu -5 304 1 2497 71 0 0 chr2 47543595 47543904 -205712679 - AluSg1 SINE Alu 0 309 1 654 312 96 32 chr2 47543904 47544482 -205712101 + L2 LINE L2 1810 3272 0 2368 225 72 19 chr2 47544839 47545466 -205711117 - L1MC4 LINE L1 -143 7899 7240 1524 181 134 3 chr2 47545468 47545782 -205710801 - L1MC4 LINE L1 -953 7089 6735 527 146 22 0 chr2 47545786 47545875 -205710708 + L1MC4a LINE L1 6671 6761 -1047 641 232 87 24 chr2 47546424 47546631 -205709952 + MER112 DNA MER1_type 41 260 0 468 310 25 13 chr2 47547086 47547244 -205709339 + Charlie8 DNA MER1_type 104 263 -2154 2019 149 3 0 chr2 47547790 47548085 -205708498 + AluSx SINE Alu 1 296 -16 466 278 149 36 chr2 47548964 47549352 -205707231 + L1MC4a LINE L1 5432 5863 -1945 1674 170 10 14 chr2 47549470 47549759 -205706824 - AluJo SINE Alu -15 297 10 43 20 0 0 chr2 47549767 47549817 -205706766 + AT_rich Low_complexity Low_complexity 1 50 0 292 234 23 18 chr2 47549831 47550130 -205706453 + (TTATA)n Simple_repeat Simple_repeat 1 300 0 75 65 0 0 chr2 47550130 47550268 -205706315 + AT_rich Low_complexity Low_complexity 1 138 0 1058 310 148 20 chr2 47550635 47551331 -205705252 + L2 LINE L2 2188 2972 -342 349 272 11 0 chr2 47551778 47551870 -205704713 + MLT1K LTR MaLR 493 585 -3 183 353 15 15 chr2 47552308 47552376 -205704207 - L2 LINE L2 -210 3062 2995 268 355 95 42 chr2 47552685 47553065 -205703518 - L2 LINE L2 -4 3268 2869 3953 0 0 0 chr2 47553067 47553343 -205703240 + LTR8 LTR ERV1 1 324 -367 2489 102 26 47 chr2 47553343 47553656 -205702927 + THE1C LTR MaLR 1 306 -69 2313 92 14 0 chr2 47553656 47553949 -205702634 + AluSq SINE Alu 1 297 -16 2489 102 26 47 chr2 47553949 47554018 -205702565 + THE1C LTR MaLR 306 375 0 3953 0 0 0 chr2 47554018 47554477 -205702106 + LTR8 LTR ERV1 324 691 0 2123 223 114 24 chr2 47554586 47554836 -205701747 + MER50 LTR ERV1 10 236 -498 3118 54 3 0 chr2 47554836 47555190 -205701393 + THE1A LTR MaLR 1 355 0 2123 223 114 24 chr2 47555190 47555604 -205700979 + MER50 LTR ERV1 236 734 0 840 188 0 0 chr2 47555694 47555832 -205700751 + MER5A DNA MER1_type 1 138 -51 24 32 0 0 chr2 47555952 47555983 -205700600 + AT_rich Low_complexity Low_complexity 1 31 0 373 200 131 54 chr2 47556105 47556235 -205700348 - MIR SINE MIR -45 217 78 505 193 64 9 chr2 47556287 47556396 -205700187 + THE1C LTR MaLR 53 167 -208 450 250 174 5 chr2 47556751 47556947 -205699636 + L1ME3A LINE L1 5937 6165 -5 2009 161 82 70 chr2 47557583 47558080 -205698503 + LTR54 LTR ERV1 8 510 0 198 250 0 62 chr2 47559578 47559658 -205696925 + MIR SINE MIR 187 261 -1 457 90 22 0 chr2 47559851 47559940 -205696643 + (CA)n Simple_repeat Simple_repeat 2 92 0 2164 114 0 7 chr2 47560060 47560358 -205696225 + AluSc SINE Alu 1 296 -13 270 260 104 21 chr2 47560974 47561070 -205695513 - MER5A DNA MER1_type -85 104 1 2290 59 35 3 chr2 47561254 47561541 -205695042 + AluY SINE Alu 1 296 -15 2448 158 123 23 chr2 47562812 47563325 -205693258 + L1MD2 LINE L1 5796 6359 0 22 35 0 0 chr2 47564269 47564298 -205692285 + AT_rich Low_complexity Low_complexity 1 29 0 667 237 70 5 chr2 47564397 47564583 -205692000 + MIR SINE MIR 47 244 -18 190 200 89 0 chr2 47564551 47564596 -205691987 + L2 LINE L2 3258 3306 -7 * 1404 242 239 23 chr2 47566199 47566446 -205690137 + L2 LINE L2 1925 2117 -1197 1969 148 3 3 chr2 47566446 47566751 -205689832 - AluSx SINE Alu -7 305 1 1404 242 239 23 chr2 47566751 47567202 -205689381 + L2 LINE L2 2117 2774 -540 211 256 136 73 chr2 47567211 47567402 -205689181 - L2 LINE L2 -1046 2268 2066 916 267 58 37 chr2 47567417 47567743 -205688840 + L2 LINE L2 2810 3142 -171 1028 179 28 0 chr2 47567817 47567996 -205688587 + MER20 DNA MER1_type 36 219 0 228 208 151 0 chr2 47567999 47568052 -205688531 - L2 LINE L2 -68 3245 3185 300 261 33 0 chr2 47568077 47568169 -205688414 + L2 LINE L2 3219 3313 0 2284 110 0 0 chr2 47568543 47568851 -205687732 + AluSx SINE Alu 1 308 -4 2435 79 3 16 chr2 47569065 47569381 -205687202 - AluSp SINE Alu -1 312 1 394 279 35 67 chr2 47570179 47570491 -205686092 + L1M4 LINE L1 4860 5161 -985 * 859 239 262 36 chr2 47570489 47570932 -205685651 + HAL1 LINE L1 211 753 -1754 1276 249 124 31 chr2 47570932 47571390 -205685193 - Charlie2 DNA MER1_type -2358 504 4 507 265 87 57 chr2 47571472 47571736 -205684847 + L2 LINE L2 2185 2456 -858 2036 109 46 0 chr2 47571744 47572028 -205684555 - AluSx SINE Alu -15 297 1 574 189 98 16 chr2 47572034 47572209 -205684374 - L1MA10 LINE L1 -2 6332 6134 371 308 204 20 chr2 47572210 47572883 -205683700 + L2 LINE L2 2482 3308 -5 245 274 185 7 chr2 47573312 47573447 -205683136 - MIR3 SINE MIR -1 207 49 193 224 155 0 chr2 47573567 47573625 -205682958 - L2 LINE L2 -21 3251 3185 1388 54 0 0 chr2 47573697 47573863 -205682720 + AluY SINE Alu 130 295 -16 981 215 221 21 chr2 47575032 47575362 -205681221 - MSTD LTR MaLR 0 396 1 684 288 33 25 chr2 47576169 47576412 -205680171 - MIR SINE MIR 0 262 18 346 220 0 0 chr2 47576437 47576496 -205680087 + MER2 DNA MER2_type 15 73 -272 206 244 49 0 chr2 47576874 47576915 -205679668 + L2 LINE L2 3250 3292 -21 205 244 44 0 chr2 47577001 47577046 -205679537 + L2 LINE L2 3250 3296 -17 2945 164 28 39 chr2 47577206 47577794 -205678789 + MLT2B3 LTR ERVL 1 520 0 1182 119 0 40 chr2 47577886 47578063 -205678520 + AluSg/x SINE Alu 132 301 -11 3751 179 113 14 chr2 47579298 47579512 -205677071 - L1ME1 LINE L1 -5 6161 5970 2241 102 31 55 chr2 47579512 47579894 -205676689 - THE1C LTR MaLR -2 373 1 3751 179 113 14 chr2 47579894 47580519 -205676064 - L1ME1 LINE L1 -196 5970 5239 264 293 66 78 chr2 47581126 47581293 -205675290 - MER5A DNA MER1_type -9 180 16 362 296 9 0 chr2 47581595 47581703 -205674880 - MIR SINE MIR -74 188 80 22 0 0 0 chr2 47581731 47581753 -205674830 + AT_rich Low_complexity Low_complexity 1 22 0 227 132 26 0 chr2 47581782 47581820 -205674763 - MLT1F LTR MaLR -2 540 502 1801 155 0 4 chr2 47582116 47582381 -205674202 - AluJb SINE Alu -45 267 4 215 147 15 44 chr2 47582470 47582538 -205674045 + GA-rich Low_complexity Low_complexity 3 68 0 2161 134 3 0 chr2 47582955 47583260 -205673323 + AluSg SINE Alu 1 306 -4 361 285 81 35 chr2 47583995 47584167 -205672416 - MER5A DNA MER1_type -5 184 5 688 290 108 36 chr2 47584280 47584345 -205672238 - LTR33 LTR ERVL -74 447 388 2453 78 3 3 chr2 47584345 47584652 -205671931 + AluY SINE Alu 1 307 -4 688 290 108 36 chr2 47584652 47585003 -205671580 - LTR33 LTR ERVL -133 388 1 29 0 0 0 chr2 47585268 47585297 -205671286 + AT_rich Low_complexity Low_complexity 1 29 0 706 228 6 44 chr2 47586541 47586721 -205669862 - MER104 DNA Tc2 -2 178 6 1405 113 29 5 chr2 47586725 47586929 -205669654 + AluJo SINE Alu 7 215 -97 2421 75 0 3 chr2 47587181 47587476 -205669107 + AluSg SINE Alu 1 294 -16 191 303 112 0 chr2 47587509 47587598 -205668985 + L3 LINE CR1 214 312 -1265 309 292 142 0 chr2 47587825 47587938 -205668645 + MIR3 SINE MIR 52 180 -28 182 359 35 28 chr2 47587923 47588068 -205668515 + L3 LINE CR1 361 506 -1071 * 682 205 10 45 chr2 47588096 47588251 -205668332 + MLT1F LTR MaLR 391 503 -2 465 347 158 3 chr2 47588253 47588619 -205667964 + L3 LINE CR1 1093 1515 -62 276 296 72 59 chr2 47588922 47589074 -205667509 - MIR SINE MIR -62 146 21 532 338 43 17 chr2 47590111 47590345 -205666238 + MIR SINE MIR 17 256 -6 1538 231 95 40 chr2 47590827 47591281 -205665302 - MLT1D LTR MaLR 0 505 27 1945 171 0 0 chr2 47591335 47591628 -205664955 - AluJb SINE Alu -19 293 1 621 229 47 110 chr2 47591800 47592119 -205664464 - MLT1L LTR MaLR -312 303 5 982 192 0 6 chr2 47592389 47592556 -205664027 + FRAM SINE Alu 1 166 0 1280 92 87 0 chr2 47593218 47593391 -205663192 + L1PA16 LINE L1 5970 6157 -9 25 75 0 0 chr2 47593396 47593449 -205663134 + AT_rich Low_complexity Low_complexity 1 53 0 4191 238 65 19 chr2 47593495 47594678 -205661905 - L1MEc LINE L1 -5125 1271 34 22 35 0 0 chr2 47594686 47594715 -205661868 + AT_rich Low_complexity Low_complexity 1 29 0 785 219 115 11 chr2 47595382 47595642 -205660941 + L1ME1 LINE L1 2753 3039 -3107 837 210 45 52 chr2 47595645 47595715 -205660868 + L1ME1 LINE L1 3688 3757 -2389 1804 163 40 3 chr2 47595715 47596016 -205660567 + AluJb SINE Alu 1 312 0 837 210 45 52 chr2 47596016 47596212 -205660371 + L1ME1 LINE L1 3757 3952 -2194 533 164 10 0 chr2 47596216 47596320 -205660263 - MER53 DNA DNA -62 127 23 3341 213 39 90 chr2 47596340 47598015 -205658568 + L1ME1 LINE L1 4565 6147 -19 231 295 16 0 chr2 47598102 47598163 -205658420 - MIR SINE MIR -60 148 87 2171 105 51 78 chr2 47598390 47598556 -205658027 + THE1B LTR MaLR 2 171 -193 2317 110 3 3 chr2 47598556 47598866 -205657717 + AluSp SINE Alu 1 310 -3 2171 105 51 78 chr2 47598866 47599072 -205657511 + THE1B LTR MaLR 171 364 0 300 353 0 26 chr2 47599223 47599339 -205657244 + MIR SINE MIR 28 140 -122 254 136 0 34 chr2 47599424 47599483 -205657100 - HsTC2 DNA Tc2 -1841 57 1 1531 191 23 53 chr2 47599529 47599832 -205656751 + AluJb SINE Alu 1 294 -18 1047 96 0 7 chr2 47599839 47599975 -205656608 + AluSq/x SINE Alu 1 135 -178 2232 110 0 0 chr2 47599975 47600267 -205656316 + AluSq SINE Alu 1 292 -21 219 283 142 25 chr2 47600859 47600979 -205655604 + MIR SINE MIR 19 152 -110 189 271 57 29 chr2 47601425 47601495 -205655088 - MIR SINE MIR -56 152 81 668 242 93 0 chr2 47601763 47601924 -205654659 - MER69A DNA AcHobo 0 177 2 199 270 90 36 chr2 47602917 47603028 -205653555 + MIR SINE MIR 35 151 -111 627 207 131 51 chr2 47603584 47603821 -205652762 + MLT1J1 LTR MaLR 2 257 -189 340 261 11 11 chr2 47603868 47603960 -205652623 + MLT1J1 LTR MaLR 355 446 0 236 135 14 68 chr2 47604435 47604568 -205652015 + (CATAA)n Simple_repeat Simple_repeat 1 125 0 321 272 141 74 chr2 47604572 47604679 -205651904 - L2 LINE L2 -1196 2118 2020 2304 92 3 3 chr2 47604679 47604982 -205651601 + AluSc SINE Alu 1 303 -6 321 272 141 74 chr2 47604982 47605384 -205651199 - L2 LINE L2 -1294 2020 1546 234 62 0 0 chr2 47607955 47607987 -205648596 + (T)n Simple_repeat Simple_repeat 1 32 0 258 224 30 30 chr2 47607987 47608054 -205648529 + MIR SINE MIR 91 157 -105 1865 129 0 31 chr2 47608065 47608359 -205648224 + AluSx SINE Alu 3 287 -25 314 268 96 57 chr2 47608768 47608925 -205647658 + MLT1I LTR MaLR 1 163 -246 897 151 311 0 chr2 47608951 47609092 -205647491 - AluJo SINE Alu -32 280 184 186 71 0 0 chr2 47609092 47609120 -205647463 + (TTTAA)n Simple_repeat Simple_repeat 3 30 0 897 151 311 0 chr2 47609120 47609184 -205647399 - AluJo SINE Alu -128 184 11 993 239 12 36 chr2 47609194 47609441 -205647142 + MLT1I LTR MaLR 167 407 -2 1742 157 3 23 chr2 47609679 47609979 -205646604 + AluJb SINE Alu 1 294 -18 217 283 60 60 chr2 47610947 47611113 -205645470 + L2 LINE L2 2933 3098 -174 560 156 101 0 chr2 47611985 47612094 -205644489 - MER96B DNA MER1_type? 0 417 298 529 221 97 0 chr2 47612091 47612245 -205644338 - MER96B DNA MER1_type? -248 169 1 * 265 261 14 0 chr2 47612371 47612440 -205644143 + L1ME LINE L1 5402 5471 -650 26 82 0 0 chr2 47613797 47613858 -205642725 + GC_rich Low_complexity Low_complexity 1 61 0 267 54 0 0 chr2 47613981 47614018 -205642565 + (CA)n Simple_repeat Simple_repeat 1 37 0 231 114 0 0 chr2 47616292 47616327 -205640256 + (T)n Simple_repeat Simple_repeat 1 35 0 270 307 80 33 chr2 47617293 47617443 -205639140 - MIR3 SINE MIR -18 190 34 1517 109 32 0 chr2 47618166 47618386 -205638197 - MER30 DNA MER1_type 0 230 4 1592 165 0 64 chr2 47618465 47618793 -205637790 + AluJo SINE Alu 1 307 -5 340 310 93 16 chr2 47619586 47619715 -205636868 - MER5A DNA MER1_type -50 139 1 894 244 4 70 chr2 47620186 47620444 -205636139 + MIR SINE MIR 22 262 0 249 302 66 19 chr2 47620752 47620858 -205635725 - MER5B DNA MER1_type -5 173 63 556 283 64 5 chr2 47621444 47621631 -205634952 + MIR SINE MIR 65 262 0 1635 287 122 18 chr2 47621940 47622959 -205633624 + L2 LINE L2 2185 3313 0 216 0 0 0 chr2 47622978 47623002 -205633581 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 2022 110 0 30 chr2 47624109 47624409 -205632174 - AluSx SINE Alu -21 291 1 2182 93 0 34 chr2 47624438 47624760 -205631823 - AluY SINE Alu 0 311 1 317 228 214 28 chr2 47625130 47625275 -205631308 - L2 LINE L2 -1 3312 3141 182 204 19 74 chr2 47625412 47625466 -205631117 + MIR3 SINE MIR 121 171 -37 276 30 0 0 chr2 47625782 47625815 -205630768 + (CAAG)n Simple_repeat Simple_repeat 2 34 0 305 299 19 0 chr2 47626023 47626130 -205630453 - MER103 DNA DNA -55 111 3 2244 78 0 0 chr2 47626437 47626721 -205629862 + AluY SINE Alu 15 298 -13 294 211 99 0 chr2 47626915 47626986 -205629597 - L2 LINE L2 -7 3265 3188 202 261 97 82 chr2 47626998 47627132 -205629451 - L3b LINE CR1 -178 1405 1270 459 258 114 0 chr2 47627172 47627304 -205629279 + MIR SINE MIR 23 169 -93 413 276 92 29 chr2 47628218 47628387 -205628196 + MIR SINE MIR 41 214 -48 891 193 11 5 chr2 47628559 47628746 -205627837 - MER53 DNA DNA 0 189 2 1651 147 0 58 chr2 47629786 47629950 -205626633 - AluJo SINE Alu -36 276 135 2184 96 0 0 chr2 47629950 47630241 -205626342 + AluSx SINE Alu 1 291 -21 1651 147 0 58 chr2 47630241 47630369 -205626214 - AluJo SINE Alu -177 135 1 641 148 43 0 chr2 47630585 47630700 -205625883 - L1MC2 LINE L1 -6 6338 6219 573 256 72 60 chr2 47630769 47630980 -205625603 + MIR SINE MIR 7 223 -39 1834 118 4 0 chr2 47630980 47631250 -205625333 + AluSq SINE Alu 1 271 -42 573 256 72 60 chr2 47631250 47631288 -205625295 + MIR SINE MIR 223 259 -3 410 208 20 59 chr2 47631599 47631700 -205624883 + MIR SINE MIR 79 175 -87 249 333 14 35 chr2 47632497 47632641 -205623942 + L1ME LINE L1 5463 5603 -559 1969 121 0 0 chr2 47632650 47632952 -205623631 + AluSx SINE Alu 1 302 0 492 301 88 9 chr2 47633261 47633487 -205623096 - MER112 DNA MER1_type 0 260 17 202 288 0 15 chr2 47633659 47633725 -205622858 - L2 LINE L2 -213 3059 2995 218 281 22 22 chr2 47634449 47634538 -205622045 + CT-rich Low_complexity Low_complexity 4 92 0 1530 184 33 20 chr2 47634708 47635013 -205621570 + AluJo SINE Alu 1 309 -3 993 153 12 0 chr2 47635099 47635348 -205621235 + (TCCA)n Simple_repeat Simple_repeat 1 252 0 282 138 0 0 chr2 47635355 47635413 -205621170 + (CAGC)n Simple_repeat Simple_repeat 4 61 0 1628 160 6 35 chr2 47635665 47635984 -205620599 + AluJo SINE Alu 1 310 -2 336 278 76 21 chr2 47636229 47636373 -205620210 + MER103 DNA DNA 5 156 -10 614 285 62 51 chr2 47639735 47640009 -205616574 - L2 LINE L2 -2 3270 2994 243 227 0 0 chr2 47640104 47640148 -205616435 + polypyrimidine Low_complexity Low_complexity 2 45 0 2403 25 0 0 chr2 47640259 47640541 -205616042 - AluYb8 SINE Alu 0 318 37 185 259 103 17 chr2 47640541 47640599 -205615984 - L2 LINE L2 -565 2749 2687 219 221 59 118 chr2 47643799 47643867 -205612716 - L2 LINE L2 -5 3308 3245 2308 93 0 0 chr2 47643930 47644240 -205612343 + AluSg SINE Alu 1 310 0 372 188 38 0 chr2 47645038 47645118 -205611465 - L1MA10 LINE L1 0 6334 6252 1057 164 0 0 chr2 47645338 47645515 -205611068 - AluSg/x SINE Alu -2 308 132 1852 125 50 0 chr2 47645515 47645794 -205610789 - AluSq SINE Alu -20 293 1 488 244 148 19 chr2 47647337 47647546 -205609037 + MER112 DNA MER1_type 5 240 -20 273 371 26 0 chr2 47647575 47647691 -205608892 + MER91A DNA MER1_type 35 153 -43 876 187 0 23 chr2 47648429 47648600 -205607983 + AluJo SINE Alu 1 167 -145 335 312 122 14 chr2 47649269 47649490 -205607093 + L1MC/D LINE L1 4077 4321 -1825 254 316 18 0 chr2 47649803 47649917 -205606666 + L1P LINE L1 4904 5019 -1127 461 223 7 27 chr2 47650148 47650296 -205606287 + L1MC/D LINE L1 5254 5398 -2410 417 323 102 6 chr2 47650337 47650543 -205606040 + L1MC/D LINE L1 5486 5709 -461 21 36 0 0 chr2 47651181 47651209 -205605374 + AT_rich Low_complexity Low_complexity 1 28 0 46 54 0 0 chr2 47652422 47652496 -205604087 + AT_rich Low_complexity Low_complexity 1 74 0 1756 137 41 20 chr2 47652549 47652842 -205603741 + AluSg SINE Alu 1 299 -11 311 328 101 32 chr2 47652947 47653136 -205603447 - L1MC4a LINE L1 -1876 5932 5731 212 269 90 82 chr2 47655009 47655097 -205601486 - L2 LINE L2 -1 3271 3180 1535 210 106 7 chr2 47655097 47655520 -205601063 - MLT1C LTR MaLR 0 467 3 212 269 90 82 chr2 47655520 47655565 -205601018 - L2 LINE L2 -92 3180 3137 291 104 0 0 chr2 47655630 47655678 -205600905 + (CA)n Simple_repeat Simple_repeat 2 49 0 1955 138 7 0 chr2 47658412 47658708 -205597875 + AluSx SINE Alu 1 298 -14 1553 28 11 0 chr2 47658864 47659043 -205597540 - L1PA3 LINE L1 -3 6152 5972 753 192 0 0 chr2 47659047 47659177 -205597406 - FLAM_C SINE Alu -3 130 1 27 0 0 0 chr2 47659272 47659299 -205597284 + AT_rich Low_complexity Low_complexity 1 27 0 226 240 20 0 chr2 47661489 47661552 -205595031 + GA-rich Low_complexity Low_complexity 1 64 0 1630 237 55 20 chr2 47663572 47664023 -205592560 + MLT1C LTR MaLR 1 467 0 238 253 80 0 chr2 47664045 47664120 -205592463 + MIR SINE MIR 168 248 -14 213 178 0 0 chr2 47664249 47664294 -205592289 + (TCTA)n Simple_repeat Simple_repeat 3 47 0 2067 112 20 0 chr2 47664832 47665136 -205591447 + AluSx SINE Alu 1 310 -2 291 296 106 28 chr2 47665263 47665405 -205591178 + MIR SINE MIR 90 242 -20 221 303 199 47 chr2 47665943 47666154 -205590429 - L3b LINE CR1 -188 1395 1153 1727 179 0 10 chr2 47666174 47666487 -205590096 + AluJo SINE Alu 1 310 -2 252 244 58 35 chr2 47666943 47667029 -205589554 - L2 LINE L2 0 3313 3226 225 289 227 0 chr2 47667509 47667637 -205588946 + MIR SINE MIR 95 251 -11 235 333 12 76 chr2 47667809 47667980 -205588603 + MIR SINE MIR 57 216 -46 254 210 99 62 chr2 47669788 47669869 -205586714 - MIR SINE MIR -113 149 66 190 206 0 0 chr2 47669958 47669992 -205586591 + L3 LINE CR1 1543 1576 -1 373 211 165 28 chr2 47670348 47670457 -205586126 - MIR SINE MIR -59 203 80 840 246 73 73 chr2 47671171 47671256 -205585327 + MLT1J2 LTR MaLR 1 85 -365 2445 96 48 25 chr2 47671256 47671612 -205584971 + THE1B LTR MaLR 1 364 0 840 246 73 73 chr2 47671612 47671856 -205584727 + MLT1J2 LTR MaLR 84 330 -120 270 267 58 58 chr2 47672293 47672413 -205584170 + MIR3 SINE MIR 45 164 -44 1918 102 60 3 chr2 47672734 47673017 -205583566 - AluSx SINE Alu -13 299 1 955 275 8 38 chr2 47673030 47673292 -205583291 - MIR SINE MIR -5 257 4 669 300 31 40 chr2 47674008 47674235 -205582348 + MIR SINE MIR 14 238 -24 1138 252 21 0 chr2 47674248 47674486 -205582097 + MIR SINE MIR 10 252 -10 1922 121 14 0 chr2 47674563 47674844 -205581739 - AluSc SINE Alu -24 285 1 2142 104 0 25 chr2 47675059 47675377 -205581206 - AluSq SINE Alu -3 310 1 180 265 0 20 chr2 47675384 47675433 -205581150 + L2 LINE L2 2695 2742 -572 305 291 150 86 chr2 47675561 47675888 -205580695 + L2 LINE L2 2923 3270 -2 256 337 12 0 chr2 47675967 47676053 -205580530 + MIR SINE MIR 54 140 -68 608 315 82 48 chr2 47676996 47677412 -205579171 - L2 LINE L2 -1 3312 2883 223 234 0 0 chr2 47677486 47677533 -205579050 + CT-rich Low_complexity Low_complexity 3 49 0 255 258 32 0 chr2 47678047 47678109 -205578474 - L2 LINE L2 0 3313 3250 1812 162 6 13 chr2 47679156 47679470 -205577113 + AluSx SINE Alu 1 312 0 765 156 16 0 chr2 47679475 47679655 -205576928 + GA-rich Low_complexity Low_complexity 1 182 0 2362 98 18 15 chr2 47679671 47680008 -205576575 - THE1C LTR MaLR -37 338 1 224 250 57 0 chr2 47680255 47680343 -205576240 + (TCTA)n Simple_repeat Simple_repeat 4 96 0 1245 174 19 5 chr2 47680987 47681200 -205575383 - MER20 DNA MER1_type -2 217 2 2208 106 3 0 chr2 47681262 47681564 -205575019 - AluSc SINE Alu -6 303 1 472 241 62 7 chr2 47681805 47681950 -205574633 + MER103 DNA DNA 1 153 -13 856 205 6 12 chr2 47682680 47682846 -205573737 + AluJo SINE Alu 118 282 -30 254 95 24 0 chr2 47682851 47682893 -205573690 + (CAA)n Simple_repeat Simple_repeat 2 44 0 2283 99 0 0 chr2 47683749 47684052 -205572531 + AluSg SINE Alu 1 303 -7 424 180 112 11 chr2 47684115 47684204 -205572379 - MIR SINE MIR -116 146 49 1575 147 10 33 chr2 47684522 47684821 -205571762 + AluJo SINE Alu 11 302 -10 767 191 76 69 chr2 47684864 47685141 -205571442 - Charlie1b DNA MER1_type -6 517 239 21 0 0 0 chr2 47685141 47685162 -205571421 + AT_rich Low_complexity Low_complexity 1 21 0 240 57 0 0 chr2 47685163 47685198 -205571385 - L1PA6 LINE L1 -8 6146 6112 1147 215 56 0 chr2 47685198 47685431 -205571152 - Charlie1b DNA MER1_type -277 246 1 2089 104 10 3 chr2 47685741 47686040 -205570543 + AluSx SINE Alu 1 301 -11 2180 95 10 0 chr2 47686521 47686825 -205569758 - AluSq SINE Alu -6 307 1 14686 114 54 26 chr2 47687000 47688488 -205568095 + Tigger1 DNA MER2_type 22 1600 -818 2146 96 0 0 chr2 47688488 47688769 -205567814 + AluSc SINE Alu 16 296 -13 14686 114 54 26 chr2 47688769 47689612 -205566971 + Tigger1 DNA MER2_type 1600 2418 0 425 289 19 0 chr2 47689788 47689892 -205566691 + MIR SINE MIR 48 153 -109 2181 85 0 0 chr2 47690570 47690875 -205565708 - AluSg SINE Alu 0 305 1 25 0 0 0 chr2 47691215 47691240 -205565343 + AT_rich Low_complexity Low_complexity 1 25 0 340 183 134 12 chr2 47691506 47691588 -205564995 - MIR3 SINE MIR -1 207 116 421 324 110 27 chr2 47691665 47691884 -205564699 - MIR SINE MIR -24 238 2 1527 164 36 22 chr2 47693095 47693370 -205563213 - AluJo SINE Alu -23 289 11 1926 158 0 0 chr2 47693378 47693681 -205562902 - AluSx SINE Alu -8 304 2 221 302 75 38 chr2 47694429 47694535 -205562048 - MIR SINE MIR -64 144 35 1625 164 66 0 chr2 47694540 47694827 -205561756 - AluJb SINE Alu -6 306 1 225 308 0 0 chr2 47695523 47695575 -205561008 + L2 LINE L2 3019 3070 -202 705 192 19 108 chr2 47695683 47695846 -205560737 - MER105 DNA DNA -5 199 58 746 225 145 25 chr2 47695846 47696046 -205560537 - MER58A DNA MER1_type 0 224 1 705 192 19 108 chr2 47696046 47696096 -205560487 - MER105 DNA DNA -146 58 5 293 324 59 0 chr2 47696106 47696208 -205560375 + L2 LINE L2 3149 3256 -16 216 244 0 0 chr2 47696177 47696218 -205560365 + MIR SINE MIR 222 262 0 * 944 253 3 83 chr2 47696219 47696579 -205560004 - L2 LINE L2 0 3313 2983 2273 91 0 0 chr2 47697007 47697304 -205559279 + AluSc SINE Alu 1 297 -12 1202 252 82 21 chr2 47697622 47697999 -205558584 + LTR16A LTR ERVL 23 422 -28 626 272 94 38 chr2 47698305 47698518 -205558065 + MIR SINE MIR 1 225 -37 532 294 55 51 chr2 47698791 47698885 -205557698 - MIR SINE MIR -6 256 164 1816 164 7 0 chr2 47698885 47699183 -205557400 - AluSx SINE Alu -12 300 1 532 294 55 51 chr2 47699183 47699343 -205557240 - MIR SINE MIR -98 164 1 243 328 141 37 chr2 47700713 47701434 -205555149 + L2 LINE L2 2255 3056 -216 732 262 50 44 chr2 47701860 47702158 -205554425 - MLT1K LTR MaLR -55 533 234 262 261 0 31 chr2 47702180 47702245 -205554338 - MIR SINE MIR -64 144 82 1442 201 23 0 chr2 47702486 47702789 -205553794 + L1ME1 LINE L1 5857 6166 0 820 144 24 0 chr2 47702958 47703083 -205553500 + FLAM_A SINE Alu 1 128 -5 1203 162 34 19 chr2 47704954 47705219 -205551364 + L1MA9 LINE L1 5062 5330 -816 1011 131 26 0 chr2 47705220 47705373 -205551210 + FRAM SINE Alu 10 166 -10 5513 132 55 28 chr2 47705374 47706338 -205550245 + L1MA9 LINE L1 5323 6312 0 302 304 73 20 chr2 47706983 47707187 -205549396 + MIR SINE MIR 48 262 0 186 302 0 32 chr2 47707253 47707316 -205549267 + MER5B DNA MER1_type 7 67 -111 1250 38 11 27 chr2 47707336 47707519 -205549064 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2098 132 0 3 chr2 47707535 47707831 -205548752 - AluSx SINE Alu -17 295 1 198 340 10 10 chr2 47707834 47707931 -205548652 - MER5B DNA MER1_type -60 118 22 * 219 268 0 0 chr2 47707878 47707934 -205548649 + MER5A DNA MER1_type 116 171 -18 587 259 116 0 chr2 47709112 47709301 -205547282 + L2 LINE L2 2190 2400 -914 266 284 0 0 chr2 47709304 47709371 -205547212 + L2 LINE L2 3246 3312 -1 262 162 88 29 chr2 47709616 47709684 -205546899 - L1MB4 LINE L1 -262 5918 5847 4692 163 56 16 chr2 47710116 47711017 -205545566 - L1MB2 LINE L1 -7 6164 5228 464 296 18 24 chr2 47711125 47711294 -205545289 - MIR SINE MIR -60 202 35 2095 133 0 0 chr2 47711813 47712098 -205544485 - AluSx SINE Alu -13 299 15 275 289 214 25 chr2 47712574 47712733 -205543850 - MIR SINE MIR -70 192 4 1343 179 39 11 chr2 47713041 47713321 -205543262 - L1MB5 LINE L1 0 6174 5887 533 285 34 6 chr2 47713537 47713716 -205542867 + MIR SINE MIR 72 255 -7 223 285 57 36 chr2 47713926 47714119 -205542464 + L2 LINE L2 2824 3020 -252 * 241 194 167 0 chr2 47714112 47714184 -205542399 + MIR SINE MIR 119 202 -60 205 344 62 31 chr2 47714315 47714411 -205542172 + L2 LINE L2 3139 3237 -35 2808 20 0 0 chr2 47714732 47715038 -205541545 - AluYa5 SINE Alu -4 307 2 736 293 80 0 chr2 47715080 47715319 -205541264 - MIR SINE MIR -3 259 2 425 232 92 30 chr2 47715396 47715560 -205541023 + MIR3 SINE MIR 32 205 -3 568 199 5 86 chr2 47716091 47716277 -205540306 - MER5A DNA MER1_type -18 171 1 446 213 120 93 chr2 47716602 47716902 -205539681 - L1MC5 LINE L1 -50 7911 7604 2166 195 62 37 chr2 47719323 47719887 -205536696 + L1ME1 LINE L1 5551 6128 -38 1119 139 0 35 chr2 47719890 47720063 -205536520 + AluSx SINE Alu 1 167 -145 345 312 122 14 chr2 47720732 47720953 -205535630 + L1MC/D LINE L1 4077 4321 -1825 254 316 18 0 chr2 47721266 47721380 -205535203 + L1P LINE L1 4904 5019 -1127 481 223 7 27 chr2 47721611 47721759 -205534824 + L1MC/D LINE L1 5254 5398 -2410 436 317 102 6 chr2 47721800 47722006 -205534577 + L1MC/D LINE L1 5486 5709 -461 21 36 0 0 chr2 47722644 47722672 -205533911 + AT_rich Low_complexity Low_complexity 1 28 0 46 54 0 0 chr2 47723883 47723957 -205532626 + AT_rich Low_complexity Low_complexity 1 74 0 1870 137 41 20 chr2 47724010 47724303 -205532280 + AluSg SINE Alu 1 299 -11 1415 216 114 9 chr2 47726556 47726977 -205529606 - MLT1C LTR MaLR 0 467 3 405 0 0 0 chr2 47777064 47777109 -205479474 + (CA)n Simple_repeat Simple_repeat 2 46 0 265 371 64 14 chr2 47778401 47778541 -205478042 - L2 LINE L2 -30 3242 3096 210 312 112 48 chr2 47778823 47778948 -205477635 + MIR SINE MIR 51 183 -79 744 251 56 0 chr2 47779742 47779921 -205476662 - MER5A DNA MER1_type 0 189 1 583 250 155 0 chr2 47779936 47780084 -205476499 - MER5A DNA MER1_type -7 182 12 459 191 75 21 chr2 47780209 47780303 -205476280 + MER5B DNA MER1_type 74 172 -6 963 234 45 84 chr2 47780376 47780687 -205475896 + MLT1A1 LTR MaLR 1 296 -69 1931 179 0 6 chr2 47780687 47780999 -205475584 - AluJb SINE Alu -1 311 2 963 234 45 84 chr2 47780999 47781067 -205475516 + MLT1A1 LTR MaLR 296 365 0 210 293 0 17 chr2 47781077 47781135 -205475448 - MER5B DNA MER1_type -5 173 117 183 100 0 0 chr2 47781160 47781190 -205475393 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 2371 98 0 0 chr2 47781190 47781487 -205475096 - AluY SINE Alu -11 300 1 422 256 12 50 chr2 47781487 47781538 -205475045 + L1MC5 LINE L1 7759 7810 -151 1037 170 50 5 chr2 47781538 47781738 -205474845 - MER3 DNA MER1_type 0 209 1 422 256 12 50 chr2 47781738 47781846 -205474737 + L1MC5 LINE L1 7810 7912 -49 593 223 31 15 chr2 47781860 47781990 -205474593 + MER5B DNA MER1_type 47 178 0 412 186 32 103 chr2 47782160 47782316 -205474267 + MER53 DNA DNA 1 145 -44 367 251 68 19 chr2 47782494 47782701 -205473882 - L1M4 LINE L1 -1629 4517 4301 201 273 30 30 chr2 47782972 47783022 -205473561 - MER5B DNA MER1_type -1 177 125 266 0 29 0 chr2 47783022 47783056 -205473527 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 201 273 30 30 chr2 47783056 47783071 -205473512 - MER5B DNA MER1_type -52 126 112 192 222 89 0 chr2 47783112 47783157 -205473426 - MER5B DNA MER1_type -124 54 6 207 0 0 0 chr2 47783200 47783223 -205473360 + (A)n Simple_repeat Simple_repeat 1 23 0 349 196 206 11 chr2 47784568 47784660 -205471923 - MIR3 SINE MIR -23 185 76 233 322 116 15 chr2 47786820 47786956 -205469627 + MIR SINE MIR 32 186 -22 396 0 0 0 chr2 47788089 47788133 -205468450 + (TG)n Simple_repeat Simple_repeat 2 45 0 2535 57 0 3 chr2 47788434 47788733 -205467850 + AluY SINE Alu 1 298 -13 192 333 32 48 chr2 47788756 47788882 -205467701 - MIR3 SINE MIR -80 128 5 861 247 82 5 chr2 47790154 47790373 -205466210 - MIR SINE MIR -19 243 8 245 279 0 0 chr2 47791195 47791256 -205465327 - L2 LINE L2 -2 3311 3251 2370 107 0 0 chr2 47795360 47795670 -205460913 - AluSg SINE Alu 0 310 1 392 315 127 28 chr2 47796317 47796530 -205460053 + MIR SINE MIR 8 241 -21 1757 270 175 14 chr2 47797641 47798595 -205457988 - L2 LINE L2 -33 3280 2183 276 356 98 0 chr2 47798605 47798737 -205457846 - MIR3 SINE MIR -24 184 40 286 302 26 109 chr2 47798872 47799183 -205457400 + MER5C DNA MER1_type 37 321 -3 289 294 109 17 chr2 47799635 47799754 -205456829 + MIR SINE MIR 87 216 -46 339 304 98 9 chr2 47801354 47801466 -205455117 + L3 LINE CR1 1414 1535 -42 335 335 100 23 chr2 47801793 47802053 -205454530 + L2 LINE L2 2613 2892 -422 446 223 58 1 chr2 47802397 47802553 -205454030 - L1MCa LINE L1 -3888 2538 2411 317 277 104 24 chr2 47802753 47802984 -205453599 - L1MCa LINE L1 -891 1896 1401 288 316 123 40 chr2 47803006 47803422 -205453161 - L1MCa LINE L1 -4946 1470 997 2394 179 38 7 chr2 47803422 47803869 -205452714 + LOR1b LTR ERV1 1 461 0 288 316 123 40 chr2 47803869 47803999 -205452584 - L1MCa LINE L1 -5419 997 879 3936 132 37 20 chr2 47804593 47804620 -205451963 - L1MA5A LINE L1 -2 6295 6270 2664 216 75 60 chr2 47804620 47805434 -205451149 + LTR1B LTR ERV1 1 826 0 3936 132 37 20 chr2 47805434 47806103 -205450480 - L1MA5A LINE L1 -27 6270 5587 259 309 195 32 chr2 47806106 47806352 -205450231 + L2 LINE L2 3011 3296 -17 2834 7 0 0 chr2 47806534 47806834 -205449749 + AluYa5 SINE Alu 1 300 -11 728 290 49 4 chr2 47807215 47807460 -205449123 - MIR SINE MIR -1 261 6 306 206 271 9 chr2 47809869 47809976 -205446607 + MIR SINE MIR 50 184 -78 237 243 81 81 chr2 47810066 47810177 -205446406 + MIR SINE MIR 37 147 -61 432 0 0 0 chr2 47810617 47810665 -205445918 + (TA)n Simple_repeat Simple_repeat 2 49 0 180 0 0 0 chr2 47810665 47810685 -205445898 + (TTG)n Simple_repeat Simple_repeat 2 21 0 231 222 0 19 chr2 47810701 47810755 -205445828 - L1MC/D LINE L1 -2059 5749 5697 265 269 67 40 chr2 47813086 47813235 -205443348 - LTR67 LTR ERVL -62 495 343 330 191 48 24 chr2 47813993 47814077 -205442506 + MER103 DNA DNA 79 164 -2 1856 115 77 3 chr2 47814128 47814414 -205442169 - AluSq SINE Alu -6 307 1 255 31 0 0 chr2 47815317 47815349 -205441234 + (TCCC)n Simple_repeat Simple_repeat 3 34 0 329 184 101 46 chr2 47815379 47815488 -205441095 - L1MC5 LINE L1 -30 7931 7817 1879 145 0 14 chr2 47816350 47816647 -205439936 + AluJo SINE Alu 1 293 -19 207 279 16 0 chr2 47816885 47816946 -205439637 + L2 LINE L2 2091 2152 -1162 1158 273 15 6 chr2 47816965 47817295 -205439288 - MER46C DNA MER2_type 0 338 6 1932 259 119 0 chr2 47817298 47817969 -205438614 + L2 LINE L2 2209 2959 -355 481 304 114 40 chr2 47818525 47818953 -205437630 - Tigger8 DNA MER2_type -204 462 3 972 107 0 0 chr2 47819026 47819166 -205437417 + AluSg/x SINE Alu 161 300 -12 267 241 17 0 chr2 47819442 47819500 -205437083 + MIR3 SINE MIR 105 163 -45 503 315 72 16 chr2 47819640 47820078 -205436505 - L1ME4a LINE L1 -157 5964 5495 2761 7 0 0 chr2 47820540 47820846 -205435737 + AluY SINE Alu 1 306 -5 216 0 0 0 chr2 47821042 47821066 -205435517 + (GA)n Simple_repeat Simple_repeat 1 24 0 824 253 172 30 chr2 47821112 47821618 -205434965 + HAL1 LINE L1 1049 1626 -881 273 176 42 133 chr2 47822040 47822205 -205434378 + HAL1b LINE L1 720 869 -479 409 270 99 26 chr2 47822352 47822585 -205433998 + HAL1 LINE L1 2225 2474 -33 22 56 0 0 chr2 47822615 47822651 -205433932 + AT_rich Low_complexity Low_complexity 1 36 0 2238 98 0 0 chr2 47823062 47823359 -205433224 - AluSg SINE Alu -13 297 1 263 247 13 52 chr2 47823557 47823634 -205432949 + MIR SINE MIR 95 168 -94 791 115 82 0 chr2 47823785 47823907 -205432676 + FLAM_C SINE Alu 2 133 0 186 303 68 45 chr2 47824069 47824201 -205432382 - L2 LINE L2 0 3272 3138 451 306 185 5 chr2 47824219 47824435 -205432148 - MIR SINE MIR -6 256 2 276 100 0 0 chr2 47825324 47825364 -205431219 + (TG)n Simple_repeat Simple_repeat 2 41 0 542 218 27 34 chr2 47825440 47825587 -205430996 - L1MC4a LINE L1 -1930 5878 5733 1829 231 58 24 chr2 47826021 47826342 -205430241 - L1ME1 LINE L1 -5 6161 5818 1737 153 27 13 chr2 47826342 47826643 -205429940 - AluJo SINE Alu -7 305 1 1829 231 58 24 chr2 47826643 47826785 -205429798 - L1ME1 LINE L1 -348 5818 5682 1997 141 0 0 chr2 47828008 47828305 -205428278 - AluSx SINE Alu -15 297 1 220 193 123 0 chr2 47828336 47828393 -205428190 - MER91C DNA MER1_type -42 98 35 723 145 38 8 chr2 47828492 47828623 -205427960 + FRAM SINE Alu 17 151 -25 199 361 0 0 chr2 47828630 47828702 -205427881 + MIR SINE MIR 141 212 -50 250 322 165 0 chr2 47829111 47829226 -205427357 + MIR SINE MIR 106 239 -23 809 143 86 0 chr2 47829385 47829525 -205427058 - FRAM SINE Alu -24 152 1 343 265 213 7 chr2 47829693 47829829 -205426754 - MIR SINE MIR -27 235 72 25 0 0 0 chr2 47829872 47829897 -205426686 + AT_rich Low_complexity Low_complexity 1 25 0 431 284 207 12 chr2 47829900 47830069 -205426514 - MIR SINE MIR -38 224 23 2199 156 39 34 chr2 47831899 47832447 -205424136 - MLT2A2 LTR ERVL 0 554 1 253 361 0 25 chr2 47832475 47832594 -205423989 - L2 LINE L2 -176 3096 2981 194 339 42 55 chr2 47832610 47832775 -205423808 - L2 LINE L2 -31 3241 3079 270 189 258 53 chr2 47833220 47833330 -205423253 + MIR SINE MIR 14 157 -105 1068 196 18 45 chr2 47833330 47833554 -205423029 - MER20 DNA MER1_type -1 218 1 270 189 258 53 chr2 47833554 47833575 -205423008 + MIR SINE MIR 157 172 -90 23 0 0 0 chr2 47835810 47835833 -205420750 + AT_rich Low_complexity Low_complexity 1 23 0 210 296 0 0 chr2 47836582 47836636 -205419947 + MIR3 SINE MIR 142 195 -13 268 265 183 40 chr2 47837438 47837636 -205418947 + MIR SINE MIR 15 251 -11 385 293 108 6 chr2 47838065 47838222 -205418361 - L3b LINE CR1 -295 1288 1116 2138 121 0 0 chr2 47839059 47839357 -205417226 - AluSx SINE Alu -12 300 3 223 326 63 11 chr2 47841641 47841736 -205414847 - L2 LINE L2 -50 3263 3164 182 347 0 13 chr2 47841880 47841955 -205414628 - MIR SINE MIR -76 186 113 546 273 0 8 chr2 47842052 47842180 -205414403 - L2 LINE L2 0 3313 3187 398 284 35 9 chr2 47843191 47843307 -205413276 - L2 LINE L2 -4 3268 3150 277 308 116 27 chr2 47843503 47843649 -205412934 - MIR SINE MIR -65 197 39 * 452 221 0 0 chr2 47843625 47843732 -205412851 - MER5A DNA MER1_type -79 110 4 245 314 20 20 chr2 47845018 47845120 -205411463 - L2 LINE L2 -83 3189 3088 838 313 28 40 chr2 47845529 47845881 -205410702 + L3 LINE CR1 1229 1576 -1 27 0 0 0 chr2 47846806 47846833 -205409750 + AT_rich Low_complexity Low_complexity 1 27 0 4334 144 4 34 chr2 47846833 47846969 -205409614 - L1MA6 LINE L1 -9 6291 6152 2004 140 3 0 chr2 47846969 47847276 -205409307 - AluSx SINE Alu -3 309 2 4334 144 4 34 chr2 47847276 47847901 -205408682 - L1MA6 LINE L1 -148 6152 5553 591 289 76 89 chr2 47847929 47848327 -205408256 - Tigger8 DNA MER2_type 0 666 273 875 159 0 0 chr2 47848327 47848459 -205408124 - FLAM_C SINE Alu 0 133 2 591 289 76 89 chr2 47848459 47848523 -205408060 - Tigger8 DNA MER2_type -393 273 210 521 246 17 0 chr2 47848524 47848642 -205407941 + L2 LINE L2 3192 3311 -2 22 0 0 0 chr2 47849010 47849032 -205407551 + AT_rich Low_complexity Low_complexity 1 22 0 1252 282 96 15 chr2 47849467 47849507 -205407076 - L1ME3 LINE L1 -211 5951 5916 2071 110 0 0 chr2 47849507 47849841 -205406742 + AluSx SINE Alu 1 334 0 1252 282 96 15 chr2 47849841 47850412 -205406171 - L1ME3 LINE L1 -246 5916 5289 188 250 68 0 chr2 47850507 47850551 -205406032 + MIR SINE MIR 76 122 -86 660 264 36 26 chr2 47850777 47850970 -205405613 + L2 LINE L2 3117 3311 -2 239 327 85 18 chr2 47852513 47852736 -205403847 + L1MC4a LINE L1 5716 5953 -1855 198 0 0 0 chr2 47853513 47853535 -205403048 + (GGGTG)n Simple_repeat Simple_repeat 3 24 0 453 233 96 14 chr2 47854122 47854268 -205402315 - L1MC5 LINE L1 -37 7924 7767 1956 123 0 3 chr2 47854345 47854629 -205401954 - AluSx SINE Alu -29 283 1 194 273 73 0 chr2 47854720 47854775 -205401808 - L2 LINE L2 -10 3303 3245 2131 90 19 47 chr2 47857283 47857605 -205398978 - AluSq SINE Alu 0 313 1 236 206 72 72 chr2 47857855 47857952 -205398631 + MIR SINE MIR 63 159 -103 182 233 11 144 chr2 47858005 47858095 -205398488 + L2 LINE L2 3185 3262 -10 315 317 70 28 chr2 47858461 47858603 -205397980 + MIR SINE MIR 85 232 -30 2050 129 0 0 chr2 47858659 47858962 -205397621 - AluSx SINE Alu -5 307 5 353 246 82 27 chr2 47860187 47860297 -205396286 - FLAM_A SINE Alu -13 120 5 1472 206 21 0 chr2 47860749 47861035 -205395548 + AluJo SINE Alu 5 296 -16 22 35 0 0 chr2 47861397 47861426 -205395157 + AT_rich Low_complexity Low_complexity 1 29 0 227 315 60 20 chr2 47861811 47861960 -205394623 + L1ME LINE L1 5484 5638 -483 1046 178 20 5 chr2 47862059 47862256 -205394327 - MLT1F1 LTR MaLR -367 200 1 227 305 84 0 chr2 47862957 47863052 -205393531 - L2 LINE L2 -34 3238 3136 1894 153 0 10 chr2 47863319 47863626 -205392957 - AluJb SINE Alu -8 304 1 3787 178 25 7 chr2 47864044 47864736 -205391847 + L1MB3 LINE L1 5477 6180 -3 367 233 85 92 chr2 47864765 47865036 -205391547 - L2 LINE L2 -36 3277 3009 424 248 85 7 chr2 47866789 47866942 -205389641 + MER103 DNA DNA 2 166 0 230 36 0 0 chr2 47867279 47867307 -205389276 - MER41B LTR ERV1 -129 506 479 655 152 67 49 chr2 47867443 47867607 -205388976 + MER53 DNA DNA 23 189 0 285 51 0 0 chr2 47867827 47867866 -205388717 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1662 142 0 0 chr2 47867869 47868122 -205388461 - AluSx SINE Alu -34 278 26 275 323 8 24 chr2 47871706 47871830 -205384753 + MIR SINE MIR 111 232 -30 180 244 0 0 chr2 47871855 47871900 -205384683 + MIR3 SINE MIR 159 203 -5 238 174 112 51 chr2 47872444 47872542 -205384041 - MER5A DNA MER1_type -77 112 9 195 340 97 21 chr2 47873138 47873282 -205383301 - MIR SINE MIR -50 212 58 259 378 160 5 chr2 47874449 47874637 -205381946 + MIR SINE MIR 46 262 0 254 254 164 64 chr2 47875706 47875816 -205380767 + MIR SINE MIR 67 187 -75 1889 143 0 10 chr2 47877099 47877393 -205379190 - AluJo SINE Alu -21 291 1 192 261 187 52 chr2 47877635 47877769 -205378814 - L2 LINE L2 0 3313 3162 237 311 158 0 chr2 47878231 47878421 -205378162 - L2 LINE L2 -882 2432 2213 580 168 37 9 chr2 47878878 47878985 -205377598 - AluSx SINE Alu -7 302 193 1055 104 0 0 chr2 47878986 47879130 -205377453 - AluSx SINE Alu -167 146 3 1352 189 23 43 chr2 47880184 47880485 -205376098 - AluJb SINE Alu -13 299 5 1463 115 23 5 chr2 47880695 47880912 -205375671 - pTR5 LTR ERV1 -2046 392 172 352 255 10 0 chr2 47880915 47881013 -205375570 - LTR30 LTR ERV1 -80 642 544 6038 108 48 63 chr2 47881013 47882181 -205374402 - pTR5 LTR ERV1 -413 2025 744 2903 151 91 14 chr2 47884260 47884844 -205371739 + L1MB8 LINE L1 5544 6172 -6 754 267 36 14 chr2 47885348 47885587 -205370996 - MIR SINE MIR 0 262 21 456 296 148 14 chr2 47888420 47888643 -205367940 + MIR SINE MIR 2 254 -8 2129 96 13 0 chr2 47889236 47889539 -205367044 - AluSq SINE Alu -6 307 1 194 271 57 0 chr2 47890444 47890514 -205366069 - MIR SINE MIR -70 192 119 543 275 109 19 chr2 47891212 47891423 -205365160 - MIR SINE MIR -7 255 26 1946 123 0 7 chr2 47892175 47892467 -205364116 - AluSx SINE Alu -22 290 1 369 305 35 35 chr2 47893748 47893889 -205362694 + L2 LINE L2 3173 3313 0 294 331 54 15 chr2 47894167 47894297 -205362286 - MIR3 SINE MIR -14 194 60 331 297 79 0 chr2 47894901 47895002 -205361581 - MIR SINE MIR -67 195 87 200 306 34 68 chr2 47895137 47895284 -205361299 - L2 LINE L2 -8 3305 3164 2857 247 69 19 chr2 47895543 47895611 -205360972 - L1ME3A LINE L1 -5 6165 6102 1895 122 0 33 chr2 47895611 47895914 -205360669 - AluSx SINE Alu -19 293 1 2857 247 69 19 chr2 47895914 47896518 -205360065 - L1ME3A LINE L1 -68 6102 5410 2037 155 70 19 chr2 47896518 47896930 -205359653 - L1MB3 LINE L1 0 6183 5751 2857 247 69 19 chr2 47896930 47897349 -205359234 - L1ME3A LINE L1 -760 5410 5014 2471 52 0 10 chr2 47897362 47897672 -205358911 - AluY SINE Alu -3 308 2 2074 132 0 0 chr2 47898264 47898560 -205358023 + AluSx SINE Alu 1 296 -16 1582 162 3 28 chr2 47898669 47898953 -205357630 + AluJb SINE Alu 1 277 -35 234 0 0 0 chr2 47898965 47898991 -205357592 + (CA)n Simple_repeat Simple_repeat 1 26 0 1968 129 14 0 chr2 47899402 47899697 -205356886 + AluSx SINE Alu 1 299 -13 2237 94 0 10 chr2 47901328 47901636 -205354947 + AluY SINE Alu 1 305 -6 273 221 142 79 chr2 47901674 47901801 -205354782 - MIR SINE MIR -15 247 113 458 299 0 0 chr2 47902223 47902357 -205354226 + MER94 DNA DNA 1 134 0 2231 96 0 0 chr2 47903459 47903750 -205352833 - AluSc SINE Alu -18 291 1 429 238 80 46 chr2 47904167 47904318 -205352265 + Charlie7 DNA MER1_type 2 157 -2455 2175 113 0 22 chr2 47904674 47904985 -205351598 + AluSx SINE Alu 1 304 -8 183 246 159 29 chr2 47906599 47906668 -205349915 + MIR SINE MIR 67 144 -64 283 311 10 38 chr2 47907806 47907936 -205348647 - MIR3 SINE MIR -19 189 61 439 227 21 0 chr2 47908283 47908380 -205348203 + L1ME2 LINE L1 6056 6154 -10 1782 154 0 41 chr2 47908380 47908699 -205347884 - AluJb SINE Alu -5 307 2 2666 132 42 2 chr2 47909055 47909465 -205347118 - MSTB LTR MaLR 0 426 1 482 275 145 5 chr2 47909484 47909691 -205346892 - MIR SINE MIR -4 258 23 1818 159 30 43 chr2 47910995 47911391 -205345192 + L1MB8 LINE L1 5772 6162 -16 24 53 0 0 chr2 47911419 47911457 -205345126 + AT_rich Low_complexity Low_complexity 1 38 0 1849 155 3 7 chr2 47912256 47912546 -205344037 + AluJo SINE Alu 1 289 -23 970 277 110 24 chr2 47912712 47913595 -205342988 - L1ME3A LINE L1 -210 5960 5003 273 252 150 27 chr2 47915022 47915169 -205341414 + MER5A DNA MER1_type 14 189 0 2096 124 0 0 chr2 47915723 47916029 -205340554 - AluSx SINE Alu 0 308 3 242 324 14 0 chr2 47916075 47916146 -205340437 - MIR3 SINE MIR -45 163 92 239 311 41 16 chr2 47917112 47917234 -205339349 - MIR3 SINE MIR -15 193 69 576 260 12 12 chr2 47917569 47917738 -205338845 - MER5B DNA MER1_type -5 173 5 685 186 8 8 chr2 47919437 47919561 -205337022 + FLAM_A SINE Alu 1 124 -9 3404 211 41 36 chr2 47919708 47920296 -205336287 - L1ME1 LINE L1 -12 6154 5570 2125 124 0 16 chr2 47920296 47920602 -205335981 + AluSx SINE Alu 1 301 -11 3404 211 41 36 chr2 47920602 47921371 -205335212 - L1ME1 LINE L1 -596 5570 4787 1442 204 0 24 chr2 47921525 47921814 -205334769 + AluJo SINE Alu 1 282 -30 22 0 0 0 chr2 47921814 47921836 -205334747 + AT_rich Low_complexity Low_complexity 1 22 0 543 255 27 34 chr2 47921849 47921998 -205334585 + MER5A DNA MER1_type 42 189 0 264 59 0 0 chr2 47922089 47922123 -205334460 + (A)n Simple_repeat Simple_repeat 1 34 0 2459 88 0 0 chr2 47922126 47922432 -205334151 + AluY SINE Alu 1 306 -5 207 0 0 0 chr2 47922690 47922713 -205333870 + (TA)n Simple_repeat Simple_repeat 1 23 0 234 0 0 0 chr2 47922715 47922741 -205333842 + (T)n Simple_repeat Simple_repeat 1 26 0 186 43 0 0 chr2 47923790 47923813 -205332770 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 366 314 33 26 chr2 47924055 47924208 -205332375 + MIR SINE MIR 4 157 -105 1747 154 69 9 chr2 47924271 47924589 -205331994 - MER1B DNA MER1_type 0 337 1 293 247 11 56 chr2 47925231 47925320 -205331263 - MLT1F1 LTR MaLR -9 558 474 2357 90 3 0 chr2 47925579 47925880 -205330703 - AluSp SINE Alu -11 302 1 2269 109 0 0 chr2 47927192 47927494 -205329089 - AluSx SINE Alu -10 302 1 264 170 0 0 chr2 47928484 47928537 -205328046 + (TGAA)n Simple_repeat Simple_repeat 1 53 0 193 299 0 15 chr2 47929540 47929607 -205326976 + L2 LINE L2 3244 3309 -4 207 210 12 99 chr2 47929980 47930061 -205326522 + MIR SINE MIR 46 119 -143 491 222 104 22 chr2 47930941 47931076 -205325507 + MER63 DNA MER1_type 1 772 -290 426 199 139 66 chr2 47931455 47931621 -205324962 + MER96B DNA MER1_type? 46 223 -194 192 261 0 0 chr2 47931685 47931731 -205324852 - MIR SINE MIR -73 135 90 1896 178 60 50 chr2 47932052 47932134 -205324449 + L1PB3 LINE L1 5698 5778 -376 180 0 0 0 chr2 47932134 47932154 -205324429 + (CA)n Simple_repeat Simple_repeat 2 21 0 1896 178 60 50 chr2 47932154 47932564 -205324019 + L1PB3 LINE L1 5778 6153 -1 244 296 52 87 chr2 47933849 47934274 -205322309 - L1ME LINE L1 -336 5785 5376 931 239 109 65 chr2 47934337 47934785 -205321798 + L1MC4 LINE L1 7451 7918 -124 207 148 33 16 chr2 47934816 47934877 -205321706 + (TA)n Simple_repeat Simple_repeat 2 63 0 1874 184 42 5 chr2 47934939 47935324 -205321259 - L1MB1 LINE L1 0 6168 5770 299 207 46 46 chr2 47935613 47935700 -205320883 - L1ME4a LINE L1 -44 6077 5991 2834 169 20 24 chr2 47935753 47936698 -205319885 - L1MB1 LINE L1 -544 5790 4846 1453 195 9 48 chr2 47936699 47937033 -205319550 + L1MB1 LINE L1 4521 4841 -1305 534 267 18 58 chr2 47938994 47939219 -205317364 + MIR SINE MIR 43 258 -4 1424 211 101 20 chr2 47939228 47939574 -205317009 - MLT1A2 LTR MaLR 0 374 1 441 0 0 0 chr2 47940786 47940835 -205315748 + (TG)n Simple_repeat Simple_repeat 2 50 0 2036 143 0 0 chr2 47940839 47941125 -205315458 - AluSx SINE Alu -26 286 1 2063 131 0 26 chr2 47941277 47941582 -205315001 + AluSx SINE Alu 1 297 -15 211 342 31 14 chr2 47941607 47941756 -205314827 - MIR SINE MIR -40 168 18 712 232 133 9 chr2 47944760 47944993 -205311590 - MIR SINE MIR 0 262 1 210 314 78 20 chr2 47945660 47945762 -205310821 - L2 LINE L2 -7 3265 3158 282 253 24 0 chr2 47947555 47947638 -205308945 + MIR SINE MIR 113 197 -65 2421 97 0 0 chr2 47947865 47948165 -205308418 - AluSx SINE Alu -12 300 1 332 260 61 8 chr2 47949090 47949232 -205307351 - MIR SINE MIR -74 134 7 643 310 88 39 chr2 47949651 47950245 -205306338 - L2 LINE L2 -876 2438 1816 22 35 0 0 chr2 47950958 47950987 -205305596 + AT_rich Low_complexity Low_complexity 1 29 0 210 71 0 0 chr2 47951373 47951401 -205305182 + (TCTCCC)n Simple_repeat Simple_repeat 6 33 0 1247 233 26 26 chr2 47951423 47951766 -205304817 - L1MC1 LINE L1 -6 6327 5985 377 229 165 0 chr2 47951768 47951877 -205304706 - MER115 DNA AcHobo -566 127 1 21 0 0 0 chr2 47953795 47953816 -205302767 + AT_rich Low_complexity Low_complexity 1 21 0 1125 228 191 50 chr2 47953948 47954413 -205302170 - MLT1F1 LTR MaLR -11 556 1 413 196 68 149 chr2 47954431 47954582 -205302001 + L2 LINE L2 3001 3163 -150 2298 108 0 23 chr2 47954582 47954889 -205301694 - AluSx SINE Alu -12 300 1 413 196 68 149 chr2 47954889 47954927 -205301656 + L2 LINE L2 3163 3202 -111 2158 137 7 0 chr2 47954927 47955234 -205301349 - AluSx SINE Alu -3 309 1 413 196 68 149 chr2 47955234 47955379 -205301204 + L2 LINE L2 3202 3309 -4 197 205 0 0 chr2 47956822 47956861 -205299722 + L2 LINE L2 3267 3305 -8 10935 181 54 48 chr2 47958045 47959197 -205297386 - L1MC1 LINE L1 -1 6612 5469 266 0 29 0 chr2 47959197 47959231 -205297352 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 10935 181 54 48 chr2 47959231 47961462 -205295121 - L1MC1 LINE L1 -1144 5469 3254 2388 115 0 0 chr2 47961462 47961774 -205294809 - AluSx SINE Alu 0 312 1 10935 181 54 48 chr2 47961774 47964918 -205291665 - L1MC1 LINE L1 -3359 3254 35 327 173 130 80 chr2 47965063 47965180 -205291403 + L1ME4a LINE L1 5934 6063 -58 180 0 0 0 chr2 47965180 47965200 -205291383 + (TA)n Simple_repeat Simple_repeat 2 21 0 327 173 130 80 chr2 47965200 47965244 -205291339 + L1ME4a LINE L1 6063 6103 -18 238 294 44 73 chr2 47967394 47967530 -205289053 - L2 LINE L2 -15 3298 3167 1488 186 72 65 chr2 47971621 47972007 -205284576 - L1MCa LINE L1 -6003 423 35 582 185 65 0 chr2 47975516 47975624 -205280959 - FLAM_A SINE Alu -18 115 1 344 243 68 0 chr2 47976859 47976933 -205279650 - L2 LINE L2 -38 3234 3156 252 295 76 0 chr2 47977044 47977149 -205279434 - MER103 DNA DNA -45 121 9 201 121 0 0 chr2 47977172 47977205 -205279378 + (CA)n Simple_repeat Simple_repeat 2 34 0 207 182 45 0 chr2 47977664 47977708 -205278875 + T-rich Low_complexity Low_complexity 1 46 0 244 225 38 25 chr2 47979907 47979987 -205276596 + L1MDa LINE L1 19 99 -6441 22 0 0 0 chr2 47980075 47980097 -205276486 + AT_rich Low_complexity Low_complexity 1 22 0 295 333 76 23 chr2 47980228 47980360 -205276223 - L2 LINE L2 -13 3259 3121 198 0 0 0 chr2 47981286 47981308 -205275275 + (A)n Simple_repeat Simple_repeat 1 22 0 188 235 39 0 chr2 47982502 47982553 -205274030 + L3 LINE CR1 1514 1566 -11 2882 13 0 0 chr2 47983032 47983341 -205273242 + AluYb8 SINE Alu 1 309 -9 376 225 56 0 chr2 47984133 47984222 -205272361 - MIR SINE MIR -21 241 148 2364 107 3 3 chr2 47985451 47985761 -205270822 + AluSx SINE Alu 1 310 -2 3155 164 19 45 chr2 47985857 47986478 -205270105 - MER6A DNA MER2_type 0 605 1 460 250 188 8 chr2 47986764 47987020 -205269563 + L1ME4a LINE L1 5814 6115 -6 570 100 0 0 chr2 47987121 47987201 -205269382 - Alu SINE Alu -19 291 212 185 121 0 30 chr2 47987759 47987792 -205268791 + MIR SINE MIR 114 145 -63 3401 167 36 18 chr2 47987794 47988466 -205268117 + L1MB3 LINE L1 5400 6083 -100 213 182 0 0 chr2 47989747 47989802 -205266781 + CT-rich Low_complexity Low_complexity 1 55 0 261 281 11 0 chr2 47990919 47991008 -205265575 + L1ME3A LINE L1 5878 5967 -203 1674 154 75 7 chr2 47991046 47991326 -205265257 + AluJo SINE Alu 1 299 -13 1086 169 0 6 chr2 47991326 47991503 -205265080 + AluJb SINE Alu 134 309 -3 2279 111 0 0 chr2 47992076 47992382 -205264201 - AluSx SINE Alu -6 306 1 3304 62 21 0 chr2 47992820 47993243 -205263340 - L1PA13 LINE L1 -19 6144 5713 537 282 163 14 chr2 47993262 47993471 -205263112 - MIR SINE MIR -22 240 1 396 0 0 0 chr2 47995732 47995776 -205260807 + (TG)n Simple_repeat Simple_repeat 2 45 0 287 284 49 0 chr2 47996201 47996282 -205260301 + MIR SINE MIR 151 235 -27 298 265 225 0 chr2 47997568 47997719 -205258864 - MER5A DNA MER1_type -4 185 1 184 250 80 54 chr2 47997933 47998045 -205258538 - L2 LINE L2 -212 3060 2946 413 158 30 50 chr2 47998408 47998509 -205258074 + MIR SINE MIR 157 255 -7 945 283 76 32 chr2 47999924 48000397 -205256186 - L2 LINE L2 0 3313 2820 1704 146 0 47 chr2 48000434 48000735 -205255848 + AluJo SINE Alu 1 287 -25 228 282 0 0 chr2 48000815 48000886 -205255697 - L2 LINE L2 -227 3086 3016 185 309 55 86 chr2 48001957 48002177 -205254406 + MIR SINE MIR 7 219 -43 468 0 0 0 chr2 48002792 48002844 -205253739 + (CA)n Simple_repeat Simple_repeat 1 52 0 396 297 104 5 chr2 48003155 48003347 -205253236 + MIR SINE MIR 2 212 -50 24 0 0 0 chr2 48003734 48003758 -205252825 + AT_rich Low_complexity Low_complexity 1 24 0 194 295 0 78 chr2 48004223 48004352 -205252231 + L2 LINE L2 3153 3271 -1 255 202 73 55 chr2 48004556 48004665 -205251918 - MER5B DNA MER1_type -5 173 63 180 0 0 0 chr2 48008358 48008378 -205248205 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 448 322 22 6 chr2 48009180 48009360 -205247223 - MER112 DNA MER1_type -7 253 71 1914 147 29 16 chr2 48009737 48010044 -205246539 + AluSx SINE Alu 1 311 -1 268 247 79 11 chr2 48010574 48010663 -205245920 + MER5A DNA MER1_type 91 185 -4 342 295 9 9 chr2 48012311 48012416 -205244167 + MIR SINE MIR 42 146 -62 203 154 0 26 chr2 48015544 48015583 -205241000 - MIR SINE MIR -63 145 108 1867 140 83 14 chr2 48015868 48016219 -205240364 - THE1C LTR MaLR 0 375 1 2908 230 49 24 chr2 48016353 48017145 -205239438 + L1M4 LINE L1 4210 5021 -1125 3544 166 8 23 chr2 48017475 48018125 -205238458 - L1MB3 LINE L1 -8 6175 5536 493 298 0 6 chr2 48018232 48018393 -205238190 - MIR SINE MIR -8 254 95 258 336 103 0 chr2 48018462 48018578 -205238005 - MIR SINE MIR -65 143 16 184 191 0 43 chr2 48018731 48018778 -205237805 - L3 LINE CR1 -8 1569 1525 1822 177 148 81 chr2 48018778 48019474 -205237109 + LTR1B LTR ERV1 1 743 -83 264 214 71 111 chr2 48019710 48019807 -205236776 - L3 LINE CR1 -192 1385 1293 1965 138 3 10 chr2 48019807 48020103 -205236480 - AluJb SINE Alu -18 294 1 264 214 71 111 chr2 48020103 48020131 -205236452 - L3 LINE CR1 -284 1293 1265 * 298 252 191 26 chr2 48020130 48020245 -205236338 + MIR SINE MIR 10 143 -119 181 392 20 0 chr2 48020409 48020511 -205236072 - L3 LINE CR1 -407 1170 1067 257 184 0 0 chr2 48021078 48021127 -205235456 - MLT1G LTR MaLR -103 439 391 742 269 5 27 chr2 48021204 48021390 -205235193 - MLT1G LTR MaLR -286 304 123 1925 102 4 0 chr2 48021579 48021833 -205234750 - AluSx SINE Alu -16 296 42 236 227 0 0 chr2 48022241 48022285 -205234298 - MIR3 SINE MIR -20 188 145 204 40 0 0 chr2 48022831 48022856 -205233727 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 1581 198 0 11 chr2 48022856 48023134 -205233449 - AluJb SINE Alu -33 279 5 746 184 13 40 chr2 48023197 48023349 -205233234 + AluJo SINE Alu 88 235 -77 519 149 18 0 chr2 48023349 48023432 -205233151 + AluJb SINE Alu 204 275 -27 823 162 28 7 chr2 48023820 48023962 -205232621 + FAM SINE Alu 20 164 -21 2231 131 0 0 chr2 48024890 48025202 -205231381 - AluSx SINE Alu 0 312 1 2017 159 0 6 chr2 48025237 48025551 -205231032 - AluJb SINE Alu 0 312 1 2196 105 13 19 chr2 48025965 48026302 -205230281 - AluSx SINE Alu 0 335 1 275 382 0 0 chr2 48026302 48026404 -205230179 - L2 LINE L2 -2 3270 3169 1674 96 181 0 chr2 48026809 48027069 -205229514 - AluSx SINE Alu -5 307 1 2512 87 3 0 chr2 48028140 48028449 -205228134 + AluSx SINE Alu 1 310 -2 195 133 0 0 chr2 48028654 48028684 -205227899 + L3b LINE CR1 1334 1363 -220 747 242 17 0 chr2 48033033 48033211 -205223372 + MER5A DNA MER1_type 9 189 0 2297 101 0 7 chr2 48034502 48034809 -205221774 + AluSc SINE Alu 1 305 -4 420 258 172 10 chr2 48034869 48035078 -205221505 + MIR SINE MIR 20 262 0 365 286 91 13 chr2 48035562 48035716 -205220867 - MIR SINE MIR -93 169 4 311 241 69 62 chr2 48037090 48037235 -205219348 + MER5A DNA MER1_type 18 163 -26 508 326 31 24 chr2 48037244 48037532 -205219051 - L3 LINE CR1 -39 1538 1249 192 77 0 0 chr2 48038536 48038562 -205218021 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 204 40 0 0 chr2 48038570 48038595 -205217988 + (A)n Simple_repeat Simple_repeat 1 25 0 2308 74 17 3 chr2 48039180 48039476 -205217107 - AluY SINE Alu -11 300 1 1771 168 0 27 chr2 48039599 48039897 -205216686 + AluJb SINE Alu 1 290 -22 2404 189 26 26 chr2 48040913 48041308 -205215275 + L1MA10 LINE L1 5770 6164 -170 234 91 0 0 chr2 48041308 48041341 -205215242 + (CA)n Simple_repeat Simple_repeat 1 33 0 180 0 0 0 chr2 48041345 48041365 -205215218 + (TAA)n Simple_repeat Simple_repeat 2 21 0 2404 189 26 26 chr2 48041365 48041529 -205215054 + L1MA10 LINE L1 6166 6334 0 1798 166 0 36 chr2 48042387 48042695 -205213888 + AluJo SINE Alu 1 297 -15 2305 100 3 3 chr2 48043037 48043338 -205213245 + AluSc SINE Alu 1 301 -8 189 0 0 0 chr2 48044231 48044252 -205212331 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 255 310 18 18 chr2 48044676 48044789 -205211794 - L2 LINE L2 0 3313 3201 285 29 0 0 chr2 48045110 48045144 -205211439 + (CA)n Simple_repeat Simple_repeat 1 34 0 1569 162 70 7 chr2 48045144 48045415 -205211168 - AluJo SINE Alu -24 288 1 383 277 74 81 chr2 48045571 48045842 -205210741 - L2 LINE L2 -90 3182 2914 2035 124 21 0 chr2 48045954 48046237 -205210346 + AluSx SINE Alu 1 289 -23 477 303 176 44 chr2 48046364 48046982 -205209601 - L2 LINE L2 -695 2619 1920 398 256 57 95 chr2 48047026 48047097 -205209486 - MIR SINE MIR -50 212 140 2115 119 3 14 chr2 48047097 48047391 -205209192 - AluSx SINE Alu -21 291 1 398 256 57 95 chr2 48047391 48047530 -205209053 - MIR SINE MIR -122 140 10 679 200 74 17 chr2 48047775 48047950 -205208633 + MER5A DNA MER1_type 1 185 -4 607 199 15 0 chr2 48048061 48048192 -205208391 - MER5B DNA MER1_type 0 178 46 2333 99 7 0 chr2 48048582 48048884 -205207699 + AluSc SINE Alu 1 304 -5 1540 198 103 87 chr2 48049497 48049992 -205206591 - MLT1D LTR MaLR -2 503 1 207 308 55 11 chr2 48049992 48050083 -205206500 - MIR SINE MIR -72 136 42 222 128 0 0 chr2 48051271 48051310 -205205273 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 266 361 42 0 chr2 48051380 48051499 -205205084 + MIR3 SINE MIR 10 133 -75 254 227 45 15 chr2 48051507 48051573 -205205010 + MLT1D LTR MaLR 3 70 -435 1678 211 157 52 chr2 48051757 48052348 -205204235 - MLT1E1 LTR MaLR -1 653 1 225 261 139 28 chr2 48053209 48053424 -205203159 + L2 LINE L2 2014 2252 -1062 204 301 52 36 chr2 48053743 48053936 -205202647 + MER91A DNA MER1_type 1 196 0 355 238 57 16 chr2 48054161 48054283 -205202300 + L1MC5 LINE L1 7775 7901 -60 273 294 0 59 chr2 48054302 48054404 -205202179 - MER5A DNA MER1_type -51 138 43 368 292 23 31 chr2 48055767 48055897 -205200686 + MIR SINE MIR 126 254 -8 3530 240 66 50 chr2 48057475 48057667 -205198916 - HAL1 LINE L1 -2 2505 2318 901 214 0 12 chr2 48057667 48057835 -205198748 - FRAM SINE Alu 0 166 1 3530 240 66 50 chr2 48057835 48058581 -205198002 - HAL1 LINE L1 -189 2318 1538 2511 88 3 42 chr2 48058581 48058958 -205197625 + L1PA11 LINE L1 5813 6174 0 3530 240 66 50 chr2 48058958 48059287 -205197296 - HAL1 LINE L1 -969 1538 1216 1695 246 119 37 chr2 48059283 48059906 -205196677 - HAL1 LINE L1 -1730 777 104 * 373 239 34 17 chr2 48060000 48060117 -205196466 - MIR SINE MIR 0 262 144 415 338 31 4 chr2 48060251 48060479 -205196104 + MIR SINE MIR 23 256 -6 * 558 204 14 70 chr2 48060478 48060517 -205196066 + MIR3 SINE MIR 10 50 -158 2293 145 24 11 chr2 48060517 48060897 -205195686 + MLT1B LTR MaLR 5 389 -1 558 204 14 70 chr2 48060897 48060999 -205195584 + MIR3 SINE MIR 50 143 -65 2480 63 0 7 chr2 48061377 48061678 -205194905 + AluY SINE Alu 1 299 -12 781 261 32 20 chr2 48062326 48062575 -205194008 + MIR SINE MIR 11 262 0 483 292 45 13 chr2 48064065 48064219 -205192364 + MIR3 SINE MIR 7 165 -43 1823 163 13 3 chr2 48065002 48065308 -205191275 - AluSx SINE Alu -3 309 1 424 307 10 72 chr2 48065337 48065627 -205190956 - L2 LINE L2 -86 3186 2915 332 233 50 42 chr2 48065801 48065921 -205190662 - MIR3 SINE MIR -2 206 86 401 264 0 100 chr2 48065964 48066104 -205190479 + MER63 DNA MER1_type 2 753 -83 391 125 0 0 chr2 48066101 48066157 -205190426 + MER63 DNA MER1_type 978 1033 -29 * 654 205 146 27 chr2 48066157 48066342 -205190241 - MER63A DNA MER1_type -3 207 1 251 176 20 0 chr2 48066429 48066480 -205190103 + MIR SINE MIR 99 150 -112 6950 164 119 109 chr2 48066533 48067078 -205189505 - L1MC3 LINE L1 -7 7847 7309 250 284 20 20 chr2 48067078 48067180 -205189403 - MLT1F1 LTR MaLR -442 125 24 6950 164 119 109 chr2 48067180 48067674 -205188909 - L1MC3 LINE L1 -545 7309 6821 16208 131 39 19 chr2 48067674 48070340 -205186243 - Tigger2 DNA MER2_type 0 2718 1 6950 164 119 109 chr2 48070340 48070582 -205186001 - L1MC3 LINE L1 -1033 6821 6583 1776 180 2 89 chr2 48070582 48071009 -205185574 - MLT1B LTR MaLR 0 390 1 6950 164 119 109 chr2 48071009 48071502 -205185081 - L1MC3 LINE L1 -1271 6583 6096 480 50 0 0 chr2 48071502 48071562 -205185021 + Alu SINE Alu 2 61 -249 6950 164 119 109 chr2 48071562 48072064 -205184519 - L1MC3 LINE L1 -1758 6096 5364 1300 181 87 14 chr2 48072064 48072351 -205184232 - AluJo SINE Alu -4 308 1 6950 164 119 109 chr2 48072351 48072479 -205184104 - L1MC3 LINE L1 -2490 5364 5239 1426 221 36 21 chr2 48072474 48072804 -205183779 + L1PB4 LINE L1 5821 6155 -1 * 10641 223 20 53 chr2 48072803 48075454 -205181129 - L1MC3 LINE L1 -962 5253 2516 3437 171 56 16 chr2 48075454 48076137 -205180446 - L1MB8 LINE L1 0 6178 5469 10641 223 20 53 chr2 48076137 48076620 -205179963 - L1MC3 LINE L1 -3699 2516 2019 278 80 20 0 chr2 48076620 48076670 -205179913 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 2122 112 0 14 chr2 48076674 48076960 -205179623 - AluSx SINE Alu -30 282 1 10641 223 20 53 chr2 48076960 48077032 -205179551 - L1MC3 LINE L1 -3987 2228 2155 266 263 13 0 chr2 48077047 48077123 -205179460 - HsTC2 DNA Tc2 -1819 79 3 287 314 48 9 chr2 48077127 48077232 -205179351 + MIR SINE MIR 152 260 -2 337 303 56 6 chr2 48077410 48077572 -205179011 + MIR SINE MIR 14 183 -79 2517 80 0 6 chr2 48078548 48078859 -205177724 - AluY SINE Alu -2 309 1 358 256 16 50 chr2 48081303 48081424 -205175159 + MARNA DNA Mariner 23 139 -447 455 274 152 10 chr2 48081714 48081918 -205174665 + MIR SINE MIR 30 262 0 215 257 0 14 chr2 48082784 48082858 -205173725 + L3b LINE CR1 1306 1378 -205 1184 142 9 53 chr2 48084381 48084607 -205171976 + MER20 DNA MER1_type 2 217 -2 567 227 128 44 chr2 48086126 48086329 -205170254 - L1ME3 LINE L1 0 6162 5943 2203 118 13 0 chr2 48086362 48086668 -205169915 - AluSx SINE Alu -2 310 1 312 281 89 7 chr2 48086796 48086931 -205169652 - MIR SINE MIR 0 262 117 207 0 0 0 chr2 48087022 48087045 -205169538 + (T)n Simple_repeat Simple_repeat 1 23 0 261 0 0 0 chr2 48087355 48087384 -205169199 + (T)n Simple_repeat Simple_repeat 1 29 0 186 43 0 0 chr2 48087621 48087644 -205168939 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1937 148 11 0 chr2 48087648 48087926 -205168657 - AluSx SINE Alu -31 281 1 2279 112 0 0 chr2 48088183 48088479 -205168104 + AluSx SINE Alu 1 296 -16 457 286 106 77 chr2 48090362 48090701 -205165882 - L2 LINE L2 -1 3271 2923 229 296 102 37 chr2 48091877 48091985 -205164598 - LTR67 LTR ERVL -7 550 436 533 262 34 0 chr2 48092493 48092642 -205163941 - MIR SINE MIR -6 256 103 433 297 18 30 chr2 48093164 48093329 -205163254 + MIR SINE MIR 48 210 -52 354 268 155 18 chr2 48093535 48093703 -205162880 + L2 LINE L2 3123 3313 0 240 202 28 56 chr2 48094396 48094574 -205162009 + (TA)n Simple_repeat Simple_repeat 1 173 0 197 32 0 32 chr2 48096107 48096138 -205160445 + (TTA)n Simple_repeat Simple_repeat 2 31 0 208 302 93 50 chr2 48097459 48097598 -205158985 + L2 LINE L2 3047 3191 -81 207 350 106 8 chr2 48097835 48097958 -205158625 - L2 LINE L2 -17 3255 3121 310 297 59 0 chr2 48098775 48098876 -205157707 - MIR3 SINE MIR -16 192 86 448 300 70 22 chr2 48099476 48099706 -205156877 + MIR SINE MIR 1 241 -21 243 0 0 0 chr2 48099887 48099914 -205156669 + (T)n Simple_repeat Simple_repeat 1 27 0 368 276 150 18 chr2 48101226 48101411 -205155172 - MIR SINE MIR -27 235 29 1986 119 16 40 chr2 48101610 48101913 -205154670 + AluSx SINE Alu 2 297 -15 314 161 65 0 chr2 48102515 48102577 -205154006 + MIR SINE MIR 67 132 -130 795 146 36 170 chr2 48102785 48103038 -205153545 + MER20 DNA MER1_type 1 219 0 397 321 95 13 chr2 48103229 48103507 -205153076 + L1MC4a LINE L1 4042 4339 -1807 21 0 0 0 chr2 48103558 48103579 -205153004 + AT_rich Low_complexity Low_complexity 1 21 0 288 221 58 0 chr2 48103784 48103870 -205152713 + L1MC4 LINE L1 6613 6703 -1339 257 163 0 0 chr2 48103828 48103877 -205152706 - L1MC4 LINE L1 -1339 6703 6655 * 690 212 142 40 chr2 48103900 48104126 -205152457 - MLT1J LTR MaLR -262 249 1 1540 291 120 27 chr2 48104126 48105748 -205150835 + L1MC4a LINE L1 4422 5398 -748 2120 148 0 0 chr2 48109730 48110034 -205146549 + AluJb SINE Alu 5 308 -4 255 363 139 3 chr2 48110474 48110783 -205145800 - L2 LINE L2 -5 3267 2917 284 271 10 21 chr2 48111803 48111899 -205144684 + MIR SINE MIR 162 256 -6 275 284 8 60 chr2 48112008 48112142 -205144441 + MIR SINE MIR 90 216 -46 27 29 0 0 chr2 48113722 48113756 -205142827 + AT_rich Low_complexity Low_complexity 1 34 0 345 117 0 0 chr2 48113835 48113895 -205142688 + (TA)n Simple_repeat Simple_repeat 2 61 0 1989 156 24 0 chr2 48114001 48114290 -205142293 - AluJb SINE Alu -16 296 1 405 131 0 0 chr2 48114414 48114475 -205142108 - MER92C LTR ERV1 -2 552 492 294 196 128 74 chr2 48114552 48114700 -205141883 - MER92C LTR ERV1 -384 170 15 396 0 0 0 chr2 48115421 48115465 -205141118 + (CA)n Simple_repeat Simple_repeat 2 45 0 254 330 4 49 chr2 48116016 48116181 -205140402 - MIR SINE MIR -79 129 14 431 231 5 96 chr2 48116190 48116325 -205140258 + MER113 DNA MER1_type? 9 122 -399 2251 121 0 0 chr2 48116325 48116622 -205139961 - AluSx SINE Alu -15 297 1 431 231 5 96 chr2 48116622 48116685 -205139898 + MER113 DNA MER1_type? 122 189 -332 2291 91 11 0 chr2 48116698 48116983 -205139600 - AluSq SINE Alu -21 292 5 295 250 0 26 chr2 48117113 48117189 -205139394 + CT-rich Low_complexity Low_complexity 3 76 0 383 281 74 33 chr2 48117189 48117310 -205139273 - L2 LINE L2 0 3272 3147 35 0 0 0 chr2 48117310 48117345 -205139238 + AT_rich Low_complexity Low_complexity 1 35 0 199 132 0 0 chr2 48117409 48117447 -205139136 - L2 LINE L2 0 3313 3276 596 281 239 3 chr2 48117457 48117838 -205138745 - L2 LINE L2 0 3313 2843 2480 81 0 0 chr2 48117864 48118225 -205138358 - AluSg SINE Alu 0 361 1 213 270 0 0 chr2 48118579 48118642 -205137941 + (CACCC)n Simple_repeat Simple_repeat 4 66 0 555 341 26 15 chr2 48118857 48119130 -205137453 + L2 LINE L2 3029 3304 -9 286 264 24 48 chr2 48119297 48119422 -205137161 - Charlie8 DNA MER1_type -2246 171 50 462 332 96 18 chr2 48119645 48120043 -205136540 + L2 LINE L2 2243 2671 -643 846 0 10 0 chr2 48120055 48120158 -205136425 + L1PA2 LINE L1 6052 6155 0 204 332 151 20 chr2 48120413 48120612 -205135971 + L2 LINE L2 3003 3227 -86 442 271 137 70 chr2 48120935 48121249 -205135334 - L1MC4a LINE L1 -1671 6137 5803 799 199 112 53 chr2 48121512 48121718 -205134865 + MER20 DNA MER1_type 1 218 -1 193 341 201 6 chr2 48122185 48122499 -205134084 - L2 LINE L2 -2 3270 2896 754 260 68 14 chr2 48123372 48123591 -205132992 + MIR SINE MIR 22 252 -10 435 223 98 36 chr2 48124151 48124344 -205132239 - MER113 DNA MER1_type? -299 222 18 192 77 0 0 chr2 48124990 48125016 -205131567 + (TGGGGG)n Simple_repeat Simple_repeat 5 30 0 216 277 60 92 chr2 48130732 48130849 -205125734 + MIR SINE MIR 79 189 -73 2051 152 0 0 chr2 48130849 48131139 -205125444 + AluJb SINE Alu 1 290 -22 216 277 60 92 chr2 48131139 48131205 -205125378 + MIR SINE MIR 189 256 -6 424 327 91 5 chr2 48131305 48131525 -205125058 + MIR SINE MIR 17 255 -7 198 427 0 19 chr2 48133554 48133657 -205122926 - L3 LINE CR1 -417 1160 1060 362 260 158 8 chr2 48134033 48134160 -205122423 + MIR3 SINE MIR 39 184 -24 377 248 26 20 chr2 48134189 48134205 -205122378 - L1MA10 LINE L1 -1 6333 6318 1114 196 82 7 chr2 48134205 48134486 -205122097 - L1ME2 LINE L1 -9 6155 5854 324 237 9 53 chr2 48134495 48134609 -205121974 - L1MC5 LINE L1 -34 7927 7819 492 231 0 9 chr2 48134620 48134728 -205121855 + L2 LINE L2 3207 3313 0 300 316 47 42 chr2 48135658 48135848 -205120735 + MIR SINE MIR 2 192 -70 188 227 280 0 chr2 48135928 48136003 -205120580 - L2 LINE L2 -38 3234 3139 1467 186 79 3 chr2 48137217 48137534 -205119049 + MER58B DNA MER1_type 1 341 0 359 261 167 17 chr2 48138515 48138695 -205117888 + Charlie8 DNA MER1_type 2 208 -2209 1777 177 0 7 chr2 48138832 48139131 -205117452 - AluJo SINE Alu -15 297 1 204 193 35 18 chr2 48139176 48139233 -205117350 + CT-rich Low_complexity Low_complexity 3 60 0 804 263 27 0 chr2 48139584 48139808 -205116775 - MIR SINE MIR -26 236 7 336 292 190 15 chr2 48140087 48140224 -205116359 - MER5B DNA MER1_type -17 161 1 368 254 82 8 chr2 48140366 48140500 -205116083 + MER5B DNA MER1_type 33 176 -2 191 384 116 19 chr2 48140500 48140801 -205115782 + L3 LINE CR1 64 395 -1182 570 277 24 33 chr2 48140847 48141060 -205115523 + L3 LINE CR1 541 751 -826 207 304 9 71 chr2 48141064 48141176 -205115407 - MIR SINE MIR -56 206 102 242 319 68 85 chr2 48141179 48141274 -205115309 + L3 LINE CR1 748 843 -734 756 171 0 0 chr2 48141274 48141391 -205115192 + FLAM_C SINE Alu 1 117 -16 242 319 68 85 chr2 48141391 48141451 -205115132 + L3 LINE CR1 843 902 -675 1725 186 74 25 chr2 48141451 48141896 -205114687 - MLT1C LTR MaLR 0 467 1 242 319 68 85 chr2 48141896 48142093 -205114490 + L3 LINE CR1 902 1095 -482 2358 99 0 0 chr2 48142118 48142410 -205114173 + AluSp SINE Alu 1 292 -21 499 375 43 9 chr2 48144106 48144453 -205112130 - L2 LINE L2 0 3272 2914 367 355 75 5 chr2 48144808 48145008 -205111575 - MIR SINE MIR -6 256 43 271 128 0 0 chr2 48146526 48146573 -205110010 - L3b LINE CR1 -250 1333 1287 430 255 124 7 chr2 48147087 48147232 -205109351 + MIR SINE MIR 46 207 -55 430 240 20 0 chr2 48147338 48147438 -205109145 + MER103 DNA DNA 17 118 -48 204 272 49 74 chr2 48148205 48148286 -205108297 - L2 LINE L2 -44 3228 3150 315 49 0 0 chr2 48148562 48148603 -205107980 + (CA)n Simple_repeat Simple_repeat 1 41 0 2372 87 7 0 chr2 48152880 48153179 -205103404 + AluSp SINE Alu 1 301 -12 1061 153 66 8 chr2 48153488 48153724 -205102859 + L1MA9 LINE L1 5931 6168 -144 1794 150 3 62 chr2 48153729 48154036 -205102547 + AluJb SINE Alu 1 289 -23 243 61 0 61 chr2 48154082 48154131 -205102452 - MADE1 DNA Mariner 0 80 35 501 58 0 0 chr2 48154135 48154204 -205102379 + L1PA10 LINE L1 6095 6163 -5 253 98 24 0 chr2 48154231 48154272 -205102311 - MADE1 DNA Mariner -37 43 2 576 113 61 0 chr2 48154272 48154387 -205102196 + L1MA9 LINE L1 6190 6311 -1 507 282 110 0 chr2 48155356 48155565 -205101018 + L1ME3A LINE L1 5395 5626 -538 1414 226 70 15 chr2 48155568 48155967 -205100616 + L1ME3A LINE L1 5743 6163 -7 2177 19 0 0 chr2 48155973 48156260 -205100323 + L1PA3 LINE L1 5898 6184 0 2295 108 13 0 chr2 48156269 48156574 -205100009 + AluSc SINE Alu 1 309 0 1647 177 56 0 chr2 48156580 48156868 -205099715 + AluJo SINE Alu 2 305 -7 230 256 67 33 chr2 48157273 48157363 -205099220 + MIR SINE MIR 88 180 -82 203 323 77 0 chr2 48157743 48157873 -205098710 - L2 LINE L2 -176 3096 2957 437 289 14 7 chr2 48158358 48158500 -205098083 - MIR SINE MIR -29 233 91 304 281 88 58 chr2 48158685 48158856 -205097727 - L2 LINE L2 0 3313 3138 1508 245 196 25 chr2 48158883 48159443 -205097140 - MER115 DNA AcHobo -37 656 1 265 255 27 101 chr2 48160927 48161076 -205095507 - MIR SINE MIR -117 145 8 266 312 43 35 chr2 48162083 48162224 -205094359 + MIR3 SINE MIR 35 176 -32 194 279 58 47 chr2 48162396 48162482 -205094101 + MIR SINE MIR 59 145 -117 325 204 0 0 chr2 48163030 48163084 -205093499 + Charlie1 DNA MER1_type 2 55 -2706 935 232 127 48 chr2 48163088 48163544 -205093039 - MLT1E LTR MaLR 0 593 1 889 176 18 0 chr2 48163556 48163721 -205092862 + Charlie1 DNA MER1_type 2343 2510 -251 451 165 18 101 chr2 48163721 48163797 -205092786 + Charlie1 DNA MER1_type 2660 2726 -35 2204 101 10 3 chr2 48163797 48164095 -205092488 + AluSx SINE Alu 1 300 -12 451 165 18 101 chr2 48164095 48164127 -205092456 + Charlie1 DNA MER1_type 2726 2759 -2 199 306 87 41 chr2 48165218 48165414 -205091169 + L2 LINE L2 2871 3075 -197 227 263 26 13 chr2 48166241 48166317 -205090266 + L2 LINE L2 3194 3270 -2 1210 309 102 35 chr2 48167135 48167717 -205088866 + L2 LINE L2 559 1213 -2101 2246 115 3 0 chr2 48167717 48168021 -205088562 - AluSg SINE Alu -5 305 1 1210 309 102 35 chr2 48168021 48168259 -205088324 + L2 LINE L2 1213 1434 -1880 474 284 49 39 chr2 48168260 48168535 -205088048 - L1 LINE L1 -1986 4160 3886 403 322 84 4 chr2 48168655 48168882 -205087701 - L1 LINE L1 -2527 3619 3375 823 272 75 63 chr2 48169913 48170502 -205086081 + L1M4 LINE L1 3950 4545 -1601 312 181 9 86 chr2 48170505 48170621 -205085962 - HAL1b LINE L1 -911 437 331 910 154 143 6 chr2 48170623 48170798 -205085785 + MSTA LTR MaLR 1 199 -229 1283 14 0 0 chr2 48170799 48170943 -205085640 + AluYb8 SINE Alu 175 318 0 1036 172 110 35 chr2 48170945 48171172 -205085411 + MSTA LTR MaLR 185 428 0 24 0 0 0 chr2 48171690 48171714 -205084869 + AT_rich Low_complexity Low_complexity 1 24 0 7510 202 22 5 chr2 48172300 48173277 -205083306 - L1PA16 LINE L1 -9 6157 5198 229 25 0 50 chr2 48173277 48173317 -205083266 + (TTTTG)n Simple_repeat Simple_repeat 4 41 0 7510 202 22 5 chr2 48173317 48174735 -205081848 - L1PA16 LINE L1 -968 5198 3744 180 0 0 0 chr2 48174923 48174943 -205081640 + (CAA)n Simple_repeat Simple_repeat 2 21 0 392 224 17 70 chr2 48174995 48175178 -205081405 - L1MEd LINE L1 -4919 1286 1152 2309 103 3 22 chr2 48175178 48175497 -205081086 - AluSp SINE Alu 0 313 1 392 224 17 70 chr2 48175497 48175563 -205081020 - L1MEd LINE L1 -5053 1152 1084 880 145 0 14 chr2 48175954 48176099 -205080484 - AluSg/x SINE Alu -5 305 163 14250 159 27 15 chr2 48176100 48178949 -205077634 - L1M1 LINE L1 -1327 6238 3308 423 0 0 0 chr2 48178949 48178996 -205077587 + (TG)n Simple_repeat Simple_repeat 2 48 0 14250 159 27 15 chr2 48178996 48180983 -205075600 - L1M1 LINE L1 -4257 3308 1346 542 248 241 38 chr2 48181018 48181308 -205075275 + MER115 DNA AcHobo 117 465 -228 412 250 50 7 chr2 48181474 48181614 -205074969 + MIR SINE MIR 31 176 -86 1158 195 46 14 chr2 48181751 48182033 -205074550 + L1MB3 LINE L1 5893 6183 0 2606 193 51 18 chr2 48182401 48182949 -205073634 - MLT1F1 LTR MaLR 0 567 2 5424 187 35 16 chr2 48183160 48184203 -205072380 - L1M1 LINE L1 -6481 1084 22 818 246 57 0 chr2 48184534 48184709 -205071874 + MER58A DNA MER1_type 40 224 0 2139 130 7 0 chr2 48184847 48185155 -205071428 + AluSx SINE Alu 1 310 -2 424 386 34 16 chr2 48185354 48185675 -205070908 - L1MEd LINE L1 -5948 448 122 2396 57 0 0 chr2 48185675 48185976 -205070607 + L1P LINE L1 2006 2306 -3840 1586 77 10 0 chr2 48186493 48186702 -205069881 + L1PA11 LINE L1 5942 6152 -22 1989 146 7 0 chr2 48186812 48187107 -205069476 - AluSx SINE Alu -15 297 1 222 37 0 0 chr2 48188349 48188376 -205068207 + (T)n Simple_repeat Simple_repeat 1 27 0 452 203 73 28 chr2 48189692 48189957 -205066626 - LTR16A LTR ERVL 0 450 141 2360 97 17 0 chr2 48190080 48190380 -205066203 + AluSq SINE Alu 1 305 -8 878 142 0 8 chr2 48190412 48190539 -205066044 - FAM SINE Alu -27 158 33 335 147 21 21 chr2 48190806 48190901 -205065682 + GA-rich Low_complexity Low_complexity 3 97 0 2379 97 3 0 chr2 48191793 48192101 -205064482 - AluSc SINE Alu 0 309 1 1709 188 7 7 chr2 48192883 48193181 -205063402 + AluJo SINE Alu 1 298 -14 855 182 40 29 chr2 48194768 48195031 -205061552 + MLT1A2 LTR MaLR 1 374 0 31 26 0 0 chr2 48196015 48196053 -205060530 + AT_rich Low_complexity Low_complexity 1 38 0 517 274 50 18 chr2 48196585 48196922 -205059661 - L2 LINE L2 0 3313 2911 23046 52 3 5 chr2 48197360 48200559 -205056024 + L1P2 LINE L1 2492 5682 -472 456 187 130 41 chr2 48200560 48200683 -205055900 - MER44D DNA MER2_type -205 404 1 1312 137 9 0 chr2 48200687 48200899 -205055684 + L1MD1 LINE L1 6028 6241 -1 480 281 15 37 chr2 48201027 48201162 -205055421 + L2 LINE L2 3136 3267 -5 3853 34 21 4 chr2 48201187 48201655 -205054928 + L1PA5 LINE L1 5677 6152 -2 369 0 0 0 chr2 48201768 48201809 -205054774 + (TG)n Simple_repeat Simple_repeat 2 42 0 499 278 0 0 chr2 48201853 48202004 -205054579 + HAL1 LINE L1 1102 1252 -1255 2180 220 46 16 chr2 48202006 48202510 -205054073 - MLT1F LTR MaLR 0 542 24 3152 230 84 76 chr2 48202512 48202722 -205053861 + HAL1 LINE L1 1275 1482 -1025 665 217 8 0 chr2 48202722 48202851 -205053732 + FLAM_A SINE Alu 4 133 0 3152 230 84 76 chr2 48202851 48203862 -205052721 + HAL1 LINE L1 1482 2506 -1 299 300 50 0 chr2 48203894 48204014 -205052569 - L2 LINE L2 -1318 1996 1871 718 273 76 27 chr2 48204072 48204402 -205052181 + L1MC/D LINE L1 5315 5660 -2148 340 270 57 29 chr2 48205062 48205241 -205051342 + MIR SINE MIR 30 206 -56 336 322 133 42 chr2 48205352 48205616 -205050967 - L2 LINE L2 -4 3268 2981 1667 171 32 0 chr2 48205911 48206192 -205050391 - AluJb SINE Alu -22 290 1 257 347 0 0 chr2 48206655 48206750 -205049833 + CT-rich Low_complexity Low_complexity 2 96 0 1393 294 57 30 chr2 48207456 48207962 -205048621 + MER115 DNA AcHobo 174 693 0 349 273 41 135 chr2 48208912 48209008 -205047575 + L2 LINE L2 3031 3134 -138 1995 158 0 3 chr2 48209008 48209319 -205047264 - AluSx SINE Alu -2 310 1 349 273 41 135 chr2 48209319 48209489 -205047094 + L2 LINE L2 3134 3272 0 202 205 0 0 chr2 48210195 48210234 -205046349 + (TG)n Simple_repeat Simple_repeat 2 40 0 2146 92 0 18 chr2 48210370 48210651 -205045932 - AluSg SINE Alu -11 299 24 1901 153 24 3 chr2 48210658 48210953 -205045630 - AluJb SINE Alu -11 301 1 332 213 189 30 chr2 48210980 48211149 -205045434 - L1ME2 LINE L1 -4 6160 5965 303 71 0 0 chr2 48211150 48211192 -205045391 + (TA)n Simple_repeat Simple_repeat 1 42 0 205 283 125 13 chr2 48211409 48211561 -205045022 + MIR SINE MIR 20 188 -74 376 305 141 14 chr2 48211632 48211845 -205044738 - MIR SINE MIR -3 259 20 1867 157 3 17 chr2 48211903 48212203 -205044380 + AluJo SINE Alu 1 296 -16 216 280 40 0 chr2 48213567 48213642 -205042941 + MIR SINE MIR 67 144 -118 336 48 0 0 chr2 48213900 48213942 -205042641 + (TG)n Simple_repeat Simple_repeat 2 43 0 336 244 98 0 chr2 48213995 48214074 -205042509 - L2 LINE L2 -4 3268 3182 325 274 126 0 chr2 48214074 48214169 -205042414 - MER91A DNA MER1_type 0 196 90 * 453 320 34 39 chr2 48214165 48214343 -205042240 - MER91A DNA MER1_type -17 179 3 445 229 0 29 chr2 48215193 48215298 -205041285 - MIR SINE MIR -75 187 86 1619 142 86 44 chr2 48215526 48215886 -205040697 + THE1C LTR MaLR 1 375 0 374 186 12 0 chr2 48215969 48216055 -205040528 + (ATG)n Simple_repeat Simple_repeat 3 89 0 2133 116 0 3 chr2 48217111 48217395 -205039188 - AluSx SINE Alu -29 283 1 414 306 35 114 chr2 48217937 48218192 -205038391 - L2 LINE L2 -87 3185 2951 565 120 0 0 chr2 48218841 48218916 -205037667 - AluS SINE Alu -17 295 221 214 292 182 7 chr2 48219766 48219915 -205036668 + MIR SINE MIR 15 190 -63 499 215 51 85 chr2 48221271 48221384 -205035199 + MIR SINE MIR 21 127 -135 2480 65 0 7 chr2 48221384 48221691 -205034892 + AluY SINE Alu 1 305 -6 499 215 51 85 chr2 48221691 48221754 -205034829 + MIR SINE MIR 127 191 -71 217 282 218 0 chr2 48222660 48222738 -205033845 - MIR SINE MIR -95 113 19 308 256 137 14 chr2 48222756 48222967 -205033616 + L2 LINE L2 2658 2894 -420 528 260 39 33 chr2 48223016 48223197 -205033386 + L2 LINE L2 3132 3313 0 198 345 0 0 chr2 48223700 48223717 -205032866 - L3b LINE CR1 -2 1581 1565 209 156 0 0 chr2 48223717 48223749 -205032834 - MIR3 SINE MIR -23 185 154 934 280 101 15 chr2 48223789 48224246 -205032337 - L1MEc LINE L1 -4184 2212 1717 243 0 0 0 chr2 48224534 48224561 -205032022 + (ATG)n Simple_repeat Simple_repeat 2 28 0 435 267 58 8 chr2 48225347 48225467 -205031116 + MIR SINE MIR 15 140 -122 1438 197 52 7 chr2 48225581 48225871 -205030712 + AluJo SINE Alu 1 303 -9 1209 272 84 29 chr2 48225890 48226471 -205030112 + L1ME4a LINE L1 5314 5926 -195 367 240 125 106 chr2 48226644 48226863 -205029720 + L1ME4a LINE L1 5611 5824 -297 6413 23 0 0 chr2 48226863 48227559 -205029024 + L1PA3 LINE L1 5457 6152 -3 367 240 125 106 chr2 48227559 48227810 -205028773 + L1ME4a LINE L1 5824 6090 -31 284 127 0 91 chr2 48227948 48228003 -205028580 + L2 LINE L2 3211 3260 -12 211 313 57 88 chr2 48228656 48228848 -205027735 - L2 LINE L2 -2 3270 3085 624 212 27 0 chr2 48229169 48229315 -205027268 - L1MA10 LINE L1 -10 6324 6175 2041 92 26 62 chr2 48229551 48229855 -205026728 - AluSg SINE Alu -17 293 1 3151 216 23 23 chr2 48230522 48231132 -205025451 - L1ME1 LINE L1 -142 6024 5412 2270 105 0 13 chr2 48231132 48231436 -205025147 + AluSx SINE Alu 5 304 -8 3151 216 23 23 chr2 48231436 48231553 -205025030 - L1ME1 LINE L1 -753 5413 5297 608 215 76 7 chr2 48231601 48231745 -205024838 - L1MA10 LINE L1 -1 6333 6180 1805 192 35 105 chr2 48231792 48231955 -205024628 - L1ME1 LINE L1 -836 5310 5137 1844 158 0 10 chr2 48231955 48232253 -205024330 - AluSq SINE Alu -18 295 1 1805 192 35 105 chr2 48232253 48232708 -205023875 - L1ME1 LINE L1 -1009 5137 4735 878 233 42 14 chr2 48232725 48232940 -205023643 - L1MB7 LINE L1 -21 6163 5943 5784 148 37 26 chr2 48233044 48233486 -205023097 - L1PA15 LINE L1 0 6165 5729 5109 44 7 2 chr2 48233486 48234074 -205022509 - LTR10C LTR ERV1 0 591 1 5784 148 37 26 chr2 48234074 48235473 -205021110 - L1PA15 LINE L1 -436 5729 4289 1278 272 84 38 chr2 48235493 48236279 -205020304 - L1ME3A LINE L1 -223 5947 5098 2470 49 0 0 chr2 48236279 48236587 -205019996 - AluY SINE Alu 0 308 1 1278 272 84 38 chr2 48236587 48236815 -205019768 - L1ME3A LINE L1 -1072 5098 4882 541 117 13 0 chr2 48236880 48236998 -205019585 - AluSg/x SINE Alu 0 322 204 658 263 107 56 chr2 48236998 48237409 -205019174 - L1ME3A LINE L1 -1320 4826 4395 1290 90 0 12 chr2 48237409 48237576 -205019007 - AluY SINE Alu -146 165 1 436 297 129 68 chr2 48237618 48238061 -205018522 - L1MEd LINE L1 -1052 1735 1012 613 220 110 103 chr2 48238246 48238408 -205018175 - ORSL DNA AcHobo 0 275 109 2060 121 7 10 chr2 48238408 48238713 -205017870 - AluSx SINE Alu -8 304 1 613 220 110 103 chr2 48238713 48238823 -205017760 - ORSL DNA AcHobo -166 109 1 194 232 196 0 chr2 48240106 48240162 -205016421 + L2 LINE L2 3242 3308 -5 379 242 21 11 chr2 48240205 48240300 -205016283 - MIR SINE MIR -147 115 20 294 227 206 21 chr2 48241472 48241625 -205014958 + MIR SINE MIR 21 147 -61 1884 239 103 89 chr2 48241965 48242115 -205014468 + L2 LINE L2 1685 1831 -1483 2601 42 7 10 chr2 48242115 48242425 -205014158 - AluY SINE Alu -2 309 1 1884 239 103 89 chr2 48242425 48242753 -205013830 + L2 LINE L2 1831 2153 -1161 306 0 0 0 chr2 48242753 48242787 -205013796 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 1884 239 103 89 chr2 48242787 48243308 -205013275 + L2 LINE L2 2153 2699 -615 1119 186 46 13 chr2 48243321 48243561 -205013022 + L1MC2 LINE L1 6075 6321 -23 686 227 44 78 chr2 48243578 48244013 -205012570 + L2 LINE L2 2709 3147 -166 284 227 0 40 chr2 48244488 48244563 -205012020 + L2 LINE L2 3162 3233 -80 319 78 0 7 chr2 48244564 48244620 -205011963 - MSTB LTR MaLR -310 122 69 227 250 158 0 chr2 48245206 48245282 -205011301 - L1ME LINE L1 -381 5740 5653 2026 184 39 5 chr2 48245474 48245855 -205010728 - Tigger2a DNA MER2_type -40 394 1 416 290 35 21 chr2 48245910 48246055 -205010528 + MER5B DNA MER1_type 7 153 -25 2652 117 82 0 chr2 48246057 48246449 -205010134 + MSTB LTR MaLR 3 426 0 1147 260 111 9 chr2 48247069 48247492 -205009091 - L1ME4a LINE L1 -5 6116 5651 1108 149 77 41 chr2 48247564 48247785 -205008798 - L1MB5 LINE L1 0 6174 5946 304 315 11 4 chr2 48247805 48247913 -205008670 + MIR SINE MIR 40 145 -63 357 192 39 77 chr2 48247987 48248091 -205008492 - MIR3 SINE MIR -14 194 95 2104 262 61 15 chr2 48248458 48249068 -205007515 + L1MC4 LINE L1 7268 7919 -123 411 21 0 0 chr2 48249068 48249116 -205007467 + (TG)n Simple_repeat Simple_repeat 2 49 0 2104 262 61 15 chr2 48249116 48249242 -205007341 + L1MC4 LINE L1 7919 8038 -4 309 319 84 6 chr2 48249273 48249439 -205007144 + Charlie8 DNA MER1_type 33 211 -2206 301 68 14 54 chr2 48250469 48250543 -205006040 + (TTTG)n Simple_repeat Simple_repeat 2 72 0 1312 186 171 0 chr2 48251298 48251394 -205005189 + AluJo SINE Alu 1 79 -223 225 0 0 0 chr2 48251394 48251419 -205005164 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 1312 186 171 0 chr2 48251419 48251580 -205005003 + AluJo SINE Alu 79 302 0 223 273 41 83 chr2 48251682 48251803 -205004780 - L2 LINE L2 -40 3273 3158 207 0 0 0 chr2 48251970 48251993 -205004590 + (TG)n Simple_repeat Simple_repeat 2 24 0 245 213 0 0 chr2 48252309 48252356 -205004227 - L2 LINE L2 -6 3266 3220 5456 205 94 121 chr2 48252438 48253409 -205003174 + L1MC4 LINE L1 5561 6556 -1486 2199 150 66 10 chr2 48253409 48253816 -205002767 - L1MB4 LINE L1 -7 6173 5744 5456 205 94 121 chr2 48253816 48254030 -205002553 + L1MC4 LINE L1 6556 6774 -1268 659 144 0 10 chr2 48254030 48254127 -205002456 + AluJb SINE Alu 187 282 -30 5456 205 94 121 chr2 48254127 48255249 -205001334 + L1MC4 LINE L1 6774 8039 -3 306 221 21 62 chr2 48255288 48255433 -205001150 + Charlie7 DNA MER1_type 2473 2611 -1 1147 176 40 20 chr2 48255460 48255710 -205000873 + L1MB3 LINE L1 5927 6181 -2 566 279 43 14 chr2 48256202 48256503 -205000080 - MLT1I LTR MaLR -15 394 57 251 291 60 75 chr2 48257536 48257670 -204998913 - L2 LINE L2 0 3272 3141 187 236 18 0 chr2 48257727 48257782 -204998801 - MIR SINE MIR -72 136 81 1780 177 3 7 chr2 48258758 48259063 -204997520 - AluJo SINE Alu -3 309 6 181 304 112 32 chr2 48259531 48259656 -204996927 + MIR SINE MIR 19 153 -109 231 88 0 0 chr2 48260028 48260062 -204996521 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 841 149 40 20 chr2 48260062 48260210 -204996373 - L1PA16 LINE L1 -12 6154 6004 1513 188 5 117 chr2 48260840 48261249 -204995334 - MLT1A1 LTR MaLR 0 365 3 272 216 22 104 chr2 48261451 48261585 -204994998 - MLT1J LTR MaLR -233 278 156 516 167 40 40 chr2 48262215 48262365 -204994218 + L1PA2 LINE L1 6006 6155 0 536 235 90 56 chr2 48262394 48262662 -204993921 + MER66A LTR ERV1 192 468 -10 2460 282 45 23 chr2 48262676 48263322 -204993261 - LTR23-int LTR ERV1 -3241 950 283 2188 116 0 17 chr2 48263322 48263624 -204992959 + AluSx SINE Alu 1 297 -15 2460 282 45 23 chr2 48263624 48263760 -204992823 - LTR23-int LTR ERV1 -3908 283 151 407 308 48 38 chr2 48263760 48263920 -204992663 - MIR SINE MIR -67 141 3 228 180 40 0 chr2 48264159 48264209 -204992374 - MER34C LTR ERV1 -373 212 161 411 248 67 40 chr2 48264211 48264267 -204992316 - LTR23-int LTR ERV1 -4130 993 940 2798 123 57 0 chr2 48264267 48264672 -204991911 + MSTA LTR MaLR 1 428 0 411 248 67 40 chr2 48264672 48264764 -204991819 - LTR23-int LTR ERV1 -4183 940 841 1438 161 7 69 chr2 48264833 48265138 -204991445 - LTR23-int LTR ERV1 -6711 826 541 2451 194 43 6 chr2 48265176 48265692 -204990891 - LTR23-int LTR ERV1 -6998 539 5 4887 163 19 12 chr2 48265797 48266660 -204989923 + LTR37A-int LTR ERV1 6279 7147 -390 808 157 79 22 chr2 48266660 48266838 -204989745 + LTR54B LTR ERV1 3 190 -308 469 192 96 17 chr2 48266843 48267020 -204989563 + LTR37A-int LTR ERV1 7342 7532 -5 229 279 163 29 chr2 48268635 48268875 -204987708 - L1ME LINE L1 -305 5816 5545 23 33 0 0 chr2 48270311 48270341 -204986242 + AT_rich Low_complexity Low_complexity 1 30 0 277 313 103 41 chr2 48271237 48271432 -204985151 - L2 LINE L2 -224 3048 2842 2378 148 50 2 chr2 48271536 48271935 -204984648 + MSTA LTR MaLR 1 418 -10 367 320 86 47 chr2 48272280 48272629 -204983954 - L2 LINE L2 -1143 2171 1804 1856 172 35 27 chr2 48272629 48273001 -204983582 + THE1C LTR MaLR 1 375 0 367 320 86 47 chr2 48273001 48273035 -204983548 - L2 LINE L2 -1510 1804 1773 346 282 58 6 chr2 48273318 48273474 -204983109 + LTR37A LTR ERV1 139 302 -124 3221 184 51 34 chr2 48273577 48274304 -204982279 + L1MB7 LINE L1 5445 6183 -1 1182 260 58 33 chr2 48274302 48274783 -204981800 + L1MEc LINE L1 2662 3154 -3061 * 1890 120 27 13 chr2 48275473 48275773 -204980810 + AluSx SINE Alu 4 307 -5 500 237 194 11 chr2 48276943 48277129 -204979454 - MIR SINE MIR -9 253 34 2290 160 15 53 chr2 48277304 48277463 -204979120 + L1MC3 LINE L1 7317 7481 -304 1815 177 3 7 chr2 48277463 48277751 -204978832 + AluJb SINE Alu 2 288 -24 2290 160 15 53 chr2 48277751 48277819 -204978764 + L1MC3 LINE L1 7481 7550 -235 1717 74 9 0 chr2 48277819 48278035 -204978548 - AluY SINE Alu -12 299 82 2290 160 15 53 chr2 48278035 48278276 -204978307 + L1MC3 LINE L1 7550 7768 -17 904 268 68 58 chr2 48278384 48278506 -204978077 + L1M4 LINE L1 1891 2010 -4205 2214 110 3 3 chr2 48278506 48278814 -204977769 + AluSc SINE Alu 1 308 -1 904 268 68 58 chr2 48278814 48279078 -204977505 + L1M4 LINE L1 2010 2270 -3945 1870 155 14 0 chr2 48279078 48279368 -204977215 + AluJb SINE Alu 1 294 -18 904 268 68 58 chr2 48279368 48279801 -204976782 + L1M4 LINE L1 2270 2657 -3558 674 239 54 48 chr2 48279813 48280320 -204976263 + L1M4 LINE L1 5254 5749 -494 378 0 0 0 chr2 48283120 48283162 -204973421 + (CA)n Simple_repeat Simple_repeat 2 43 0 59 63 0 0 chr2 48284327 48284406 -204972177 + AT_rich Low_complexity Low_complexity 1 79 0 676 64 72 4 chr2 48284406 48284657 -204971926 + (TA)n Simple_repeat Simple_repeat 1 268 0 2300 64 3 30 chr2 48284657 48284952 -204971631 - AluY SINE Alu -24 287 1 239 250 48 24 chr2 48284955 48285039 -204971544 + MER115 DNA AcHobo 607 692 -1 937 232 40 104 chr2 48285045 48285653 -204970930 + L1MEc LINE L1 3245 3813 -2402 242 263 18 18 chr2 48285840 48285897 -204970686 - MER5B DNA MER1_type -85 93 37 4340 212 149 48 chr2 48285897 48286737 -204969846 - MER109 Unknown Unknown -2 2430 1676 2202 75 10 36 chr2 48286737 48287045 -204969538 + AluSg SINE Alu 1 300 -10 4340 212 149 48 chr2 48287045 48287763 -204968820 - MER109 Unknown Unknown -756 1676 436 390 266 91 7 chr2 48288420 48288563 -204968020 - L2 LINE L2 -535 2779 2625 189 317 110 24 chr2 48289014 48289178 -204967405 - MIR SINE MIR -83 179 2 348 258 103 63 chr2 48289269 48289496 -204967087 + L1ME LINE L1 5563 5802 -319 852 193 182 21 chr2 48289496 48289683 -204966900 + MER20 DNA MER1_type 2 218 -1 348 258 103 63 chr2 48289683 48289707 -204966876 + L1ME LINE L1 5802 5824 -297 322 277 85 28 chr2 48290126 48290267 -204966316 - MLT1K LTR MaLR -4 584 436 502 158 12 0 chr2 48290396 48290478 -204966105 - HAL1 LINE L1 -787 1720 1638 315 119 0 0 chr2 48290482 48290524 -204966059 - Alu SINE Alu -250 50 9 490 278 80 0 chr2 48291095 48291271 -204965312 + MLT1I LTR MaLR 186 375 -34 262 320 0 19 chr2 48291314 48291417 -204965166 + GA-rich Low_complexity Low_complexity 3 103 0 380 344 46 46 chr2 48293981 48294243 -204962340 - MIR SINE MIR 0 262 1 349 301 199 5 chr2 48294264 48294460 -204962123 + L3 LINE CR1 1306 1539 -38 268 354 43 6 chr2 48294797 48294961 -204961622 - L2 LINE L2 -458 2856 2687 2089 213 30 0 chr2 48294961 48295394 -204961189 + L1MEc LINE L1 3801 4246 -1969 368 281 92 28 chr2 48295617 48295814 -204960769 + MIR SINE MIR 4 206 -56 757 317 103 22 chr2 48297112 48297570 -204959013 + L3 LINE CR1 1083 1577 0 713 158 14 0 chr2 48298350 48298489 -204958094 + L1MA7 LINE L1 6141 6281 -10 1848 159 3 7 chr2 48298511 48298801 -204957782 + AluJo SINE Alu 1 289 -23 1508 184 48 11 chr2 48301504 48301776 -204954807 + AluJo SINE Alu 11 292 -20 2514 237 117 23 chr2 48301781 48303160 -204953423 - L1MEc LINE L1 -2695 3520 2043 282 234 9 122 chr2 48303170 48303277 -204953306 + MER21B LTR ERV1 12 106 -757 * 2765 205 89 36 chr2 48303275 48303972 -204952611 + MER21B LTR ERV1 19 752 -111 5315 258 78 29 chr2 48304106 48304881 -204951702 - L1MEc LINE L1 -4373 2023 1287 1808 171 17 3 chr2 48304881 48305180 -204951403 - 7SLRNA srpRNA srpRNA 0 320 18 5315 258 78 29 chr2 48305180 48306300 -204950283 - L1MEc LINE L1 -5109 1287 36 300 268 70 14 chr2 48307401 48307472 -204949111 + L1MDb LINE L1 647 721 -5688 402 217 11 22 chr2 48308737 48308829 -204947754 + MER5A DNA MER1_type 9 99 -90 351 344 89 0 chr2 48310134 48310291 -204946292 + MIR SINE MIR 18 188 -74 315 326 149 6 chr2 48311024 48311205 -204945378 + L1MC4a LINE L1 5683 5889 -1919 248 202 5 38 chr2 48311485 48311545 -204945038 + MIR SINE MIR 106 165 -43 2043 193 40 3 chr2 48311680 48312032 -204944551 - MLT1A1 LTR MaLR 0 365 1 1737 158 27 0 chr2 48312738 48313030 -204943553 - AluJo SINE Alu -12 300 1 1031 252 76 18 chr2 48313161 48313490 -204943093 - MARNA DNA Mariner -150 436 89 404 164 15 0 chr2 48313739 48313806 -204942777 + MER5A DNA MER1_type 120 187 -2 847 191 86 0 chr2 48314049 48314211 -204942372 + MER5B DNA MER1_type 3 178 0 457 237 46 38 chr2 48315488 48315619 -204940964 + MIR SINE MIR 76 207 -55 436 234 75 34 chr2 48315788 48315939 -204940644 + MIR SINE MIR 12 164 -60 455 283 44 6 chr2 48316050 48316209 -204940374 + MIR SINE MIR 76 240 -22 561 185 157 19 chr2 48317163 48317271 -204939312 - FLAM_A SINE Alu -10 123 1 307 263 44 51 chr2 48317303 48317440 -204939143 - L1ME4a LINE L1 -1 6120 5985 485 280 85 19 chr2 48317447 48317590 -204938993 + MIR SINE MIR 1 164 -98 180 0 0 0 chr2 48317590 48317610 -204938973 + (TAA)n Simple_repeat Simple_repeat 3 22 0 485 280 85 19 chr2 48317610 48317677 -204938906 + MIR SINE MIR 164 225 -37 696 292 60 30 chr2 48317851 48318084 -204938499 - MIR SINE MIR 0 262 23 340 325 34 8 chr2 48319522 48319639 -204936944 + MIR SINE MIR 95 214 -48 1326 146 77 5 chr2 48320683 48320903 -204935680 - MER46A DNA MER2_type 0 236 1 361 313 70 9 chr2 48320951 48321066 -204935517 - MIR SINE MIR -60 148 27 538 335 60 9 chr2 48321845 48322078 -204934505 + MIR SINE MIR 5 249 -13 25 65 0 0 chr2 48322088 48322134 -204934449 + AT_rich Low_complexity Low_complexity 1 46 0 220 290 62 108 chr2 48324218 48324394 -204932189 + L2 LINE L2 3076 3243 -29 427 226 142 0 chr2 48325268 48325374 -204931209 + MER5A DNA MER1_type 4 124 -65 360 253 0 0 chr2 48325377 48325456 -204931127 + MER45 DNA AcHobo 1 79 -99 367 155 0 0 chr2 48325456 48325514 -204931069 + MER45 DNA AcHobo 1516 1573 -8 270 271 14 0 chr2 48325520 48325590 -204930993 + MER5A DNA MER1_type 119 189 0 1633 147 11 4 chr2 48325827 48326099 -204930484 + Tigger1 DNA MER2_type 1909 2182 -236 433 286 149 0 chr2 48327553 48327721 -204928862 - MIR SINE MIR -45 217 25 519 272 198 0 chr2 48327721 48327923 -204928660 + MIR SINE MIR 13 254 -8 805 211 154 123 chr2 48329495 48330016 -204926567 - MLT1H1 LTR MaLR -5 548 1 388 243 96 52 chr2 48330174 48330310 -204926273 + L3 LINE CR1 1427 1568 -9 340 278 19 86 chr2 48330825 48330987 -204925596 + MIR3 SINE MIR 50 200 -8 256 331 6 64 chr2 48331142 48331299 -204925284 - L2 LINE L2 -473 2841 2694 2453 73 7 3 chr2 48331305 48331607 -204924976 + AluSc SINE Alu 1 303 -6 200 289 26 53 chr2 48332668 48332744 -204923839 - L2 LINE L2 -66 3206 3133 240 292 0 0 chr2 48333949 48333997 -204922586 + MIR SINE MIR 12 59 -203 294 280 65 28 chr2 48334536 48334643 -204921940 + MIR SINE MIR 119 229 -33 615 62 0 0 chr2 48335248 48335328 -204921255 + (TGG)n Simple_repeat Simple_repeat 3 82 0 180 316 21 84 chr2 48335434 48335529 -204921054 + L2 LINE L2 375 463 -2851 186 133 0 0 chr2 48340189 48340219 -204916364 + (TG)n Simple_repeat Simple_repeat 1 30 0 217 400 0 10 chr2 48341689 48341789 -204914794 + MIR SINE MIR 43 141 -67 606 310 35 0 chr2 48342384 48342558 -204914025 - MER91A DNA MER1_type 0 196 17 559 159 19 0 chr2 48342938 48343045 -204913538 + MER3 DNA MER1_type 96 204 -5 240 250 15 0 chr2 48342997 48343065 -204913518 - MER3 DNA MER1_type -108 101 33 * 266 329 153 0 chr2 48343249 48343334 -204913249 + L2 LINE L2 3152 3249 -23 225 108 0 0 chr2 48343758 48343795 -204912788 + (CA)n Simple_repeat Simple_repeat 2 38 0 298 232 71 39 chr2 48345317 48345488 -204911095 + MIR SINE MIR 16 188 -67 2255 194 77 34 chr2 48345489 48346077 -204910506 + L1ME1 LINE L1 5548 6160 -6 317 317 43 20 chr2 48346102 48346263 -204910320 + MIR SINE MIR 16 180 -63 317 253 25 13 chr2 48346272 48346351 -204910232 - MIR SINE MIR -1 261 182 270 233 47 58 chr2 48346827 48346913 -204909670 - MIR SINE MIR -105 157 73 204 67 0 0 chr2 48347474 48347504 -204909079 + (A)n Simple_repeat Simple_repeat 1 30 0 194 42 0 0 chr2 48347749 48347773 -204908810 + MIR SINE MIR 90 113 -95 201 269 19 0 chr2 48347890 48347942 -204908641 + MIR3 SINE MIR 132 184 -24 300 260 94 39 chr2 48350788 48350915 -204905668 - MIR SINE MIR -62 200 67 200 213 43 0 chr2 48355266 48355313 -204901270 + L2 LINE L2 3197 3245 -27 215 304 0 43 chr2 48356113 48356182 -204900401 + MIR SINE MIR 5 70 -192 244 226 208 9 chr2 48360082 48360188 -204896395 - MIR SINE MIR -63 145 19 621 211 0 0 chr2 48361471 48361580 -204895003 - MIR3 SINE MIR -54 154 46 599 259 18 18 chr2 48362466 48362632 -204893951 + MIR SINE MIR 8 173 -89 * 1044 292 113 28 chr2 48362628 48363132 -204893451 - L2 LINE L2 -1055 2259 1713 312 102 0 0 chr2 48363132 48363181 -204893402 + (TG)n Simple_repeat Simple_repeat 1 49 0 368 193 108 0 chr2 48363199 48363282 -204893301 - L1MC3 LINE L1 -16 7769 7678 925 118 0 15 chr2 48363282 48363417 -204893166 - AluJb SINE Alu -179 133 1 2046 160 111 18 chr2 48363417 48363866 -204892717 - L1MC3 LINE L1 -96 7689 7199 713 324 175 9 chr2 48364076 48364517 -204892066 - L2 LINE L2 -1958 1356 843 1542 231 101 20 chr2 48364525 48365022 -204891561 + L1ME1 LINE L1 5612 6148 -18 479 291 140 25 chr2 48365196 48365560 -204891023 - L2 LINE L2 -2802 512 107 212 143 0 0 chr2 48366439 48366474 -204890109 + (G)n Simple_repeat Simple_repeat 1 35 0 379 250 19 28 chr2 48366766 48366874 -204889709 - MIR SINE MIR -67 195 89 749 353 97 6 chr2 48366958 48367318 -204889265 + L3 LINE CR1 974 1366 -211 1407 266 61 26 chr2 48368079 48368722 -204887861 + L1ME3A LINE L1 3455 4119 -2027 4157 170 39 10 chr2 48368730 48369544 -204887039 - MER21B LTR ERV1 0 863 1 2571 239 111 74 chr2 48369544 48370164 -204886419 + L1ME3A LINE L1 4114 4710 -1460 882 172 19 6 chr2 48370164 48370321 -204886262 + FAM SINE Alu 1 159 -16 2571 239 111 74 chr2 48370321 48371659 -204884924 + L1ME3A LINE L1 4710 6161 -9 183 279 51 25 chr2 48372247 48372326 -204884257 - MIR3 SINE MIR -13 195 115 207 200 0 0 chr2 48372663 48372703 -204883880 + (TTCA)n Simple_repeat Simple_repeat 3 42 0 787 268 5 0 chr2 48372969 48373163 -204883420 - L1ME1 LINE L1 -5 6161 5967 433 263 45 8 chr2 48373340 48373473 -204883110 - MIR SINE MIR -72 190 53 1616 108 0 5 chr2 48374907 48375119 -204881464 + AluSq SINE Alu 71 281 -32 331 231 88 0 chr2 48375344 48375435 -204881148 - L2 LINE L2 -12 3260 3162 780 212 103 10 chr2 48375578 48375781 -204880802 + MIR SINE MIR 6 227 -35 239 125 179 0 chr2 48375815 48375871 -204880712 + L1PA15 LINE L1 6094 6159 -6 21 0 0 0 chr2 48375871 48375892 -204880691 + AT_rich Low_complexity Low_complexity 1 21 0 323 299 15 30 chr2 48376439 48376573 -204880010 - MIR SINE MIR -27 235 104 396 0 0 0 chr2 48377323 48377367 -204879216 + (CA)n Simple_repeat Simple_repeat 2 45 0 214 247 35 35 chr2 48377731 48377816 -204878767 - MIR3 SINE MIR 0 208 124 249 319 26 9 chr2 48378598 48378714 -204877869 - L2 LINE L2 -3 3269 3152 446 248 124 24 chr2 48378903 48379113 -204877470 - MIR SINE MIR -10 252 22 45 62 0 0 chr2 48380794 48380874 -204875709 + AT_rich Low_complexity Low_complexity 1 80 0 1812 166 6 28 chr2 48381472 48381791 -204874792 + AluJo SINE Alu 1 312 0 479 250 109 13 chr2 48382063 48382219 -204874364 + MIR SINE MIR 3 173 -89 4285 249 102 40 chr2 48382229 48382666 -204873917 + L1MEc LINE L1 377 786 -5429 1237 210 39 32 chr2 48382666 48382975 -204873608 + AluJo SINE Alu 1 311 -1 4285 249 102 40 chr2 48382975 48383166 -204873417 + L1MEc LINE L1 786 964 -5251 956 51 0 0 chr2 48383166 48383283 -204873300 + L1PA4 LINE L1 6036 6152 -3 4285 249 102 40 chr2 48383283 48384718 -204871865 + L1MEc LINE L1 964 2530 -3685 326 203 0 63 chr2 48384718 48384797 -204871786 + MER21A LTR ERV1 1 74 -857 3147 205 71 49 chr2 48384812 48385549 -204871034 + MER21A LTR ERV1 175 927 -4 502 227 99 61 chr2 48385552 48385846 -204870737 + L1MEc LINE L1 2527 3159 -3056 3366 147 20 20 chr2 48385847 48386451 -204870132 + L1MEc LINE L1 3780 4383 -1832 3805 70 0 0 chr2 48386472 48386955 -204869628 + L1P LINE L1 3 485 -5661 504 182 0 0 chr2 48386956 48387044 -204869539 + AluSg/x SINE Alu 213 300 -10 5385 193 60 46 chr2 48387044 48388343 -204868240 + L1MA7 LINE L1 3003 4281 -2010 1858 185 3 0 chr2 48388343 48388646 -204867937 + AluJo SINE Alu 6 309 -3 5385 193 60 46 chr2 48388646 48389120 -204867463 + L1MA7 LINE L1 4281 4746 -1545 396 0 0 0 chr2 48389120 48389164 -204867419 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 5385 193 60 46 chr2 48389164 48389849 -204866734 + L1MA7 LINE L1 4746 5419 -872 1654 196 4 0 chr2 48389849 48390129 -204866454 + AluJb SINE Alu 1 281 -31 5385 193 60 46 chr2 48390129 48390760 -204865823 + L1MA7 LINE L1 5419 6285 -6 2330 226 101 12 chr2 48390760 48391327 -204865256 + Zaphod DNA AcHobo 77 693 -3338 572 153 122 0 chr2 48391334 48391432 -204865151 - AluJb SINE Alu -201 111 2 502 242 44 69 chr2 48391435 48391546 -204865037 + Zaphod DNA AcHobo 763 875 -3156 2356 59 0 7 chr2 48391546 48391897 -204864686 + AluY SINE Alu 2 311 0 502 242 44 69 chr2 48391897 48392145 -204864438 + Zaphod DNA AcHobo 875 1113 -2918 1090 269 114 39 chr2 48392259 48392742 -204863841 + Zaphod DNA AcHobo 1371 1889 -2142 1403 123 5 0 chr2 48392776 48392979 -204863604 + AluSq SINE Alu 105 308 -5 4825 209 84 45 chr2 48392980 48393872 -204862711 + Zaphod DNA AcHobo 1924 2780 -1251 2159 130 3 0 chr2 48393872 48394180 -204862403 + AluSq SINE Alu 1 309 -4 4825 209 84 45 chr2 48394180 48395194 -204861389 + Zaphod DNA AcHobo 2780 3962 -69 253 61 98 0 chr2 48395194 48395276 -204861307 + (TA)n Simple_repeat Simple_repeat 1 90 0 302 233 0 0 chr2 48395377 48395437 -204861146 + AluJ/monomer SINE Alu 241 300 -2 237 152 0 0 chr2 48395462 48395508 -204861075 - LTR66 LTR ERVL -171 439 394 231 188 0 0 chr2 48395510 48395558 -204861025 + (CATATA)n Simple_repeat Simple_repeat 6 53 0 662 139 0 117 chr2 48395763 48395900 -204860683 + FLAM_A SINE Alu 1 121 -12 25 0 0 0 chr2 48395900 48395925 -204860658 + AT_rich Low_complexity Low_complexity 1 25 0 249 282 82 9 chr2 48396146 48396256 -204860327 - MIR SINE MIR -28 234 117 317 338 59 38 chr2 48398241 48398685 -204857898 + L2 LINE L2 554 1006 -2308 1979 154 0 10 chr2 48399297 48399602 -204856981 + AluJb SINE Alu 1 302 -10 1648 247 95 77 chr2 48399772 48400747 -204855836 + L2 LINE L2 2289 3281 -32 248 144 19 48 chr2 48400747 48400851 -204855732 + (TA)n Simple_repeat Simple_repeat 1 101 0 315 0 0 0 chr2 48400891 48400926 -204855657 + (TC)n Simple_repeat Simple_repeat 2 36 0 243 0 0 0 chr2 48400925 48400952 -204855631 + (TA)n Simple_repeat Simple_repeat 1 27 0 * 241 308 247 40 chr2 48400967 48401549 -204855034 + L2 LINE L2 1885 2587 -727 299 320 141 16 chr2 48403420 48403548 -204853035 - MIR3 SINE MIR -4 204 61 183 276 23 35 chr2 48404981 48405068 -204851515 - MIR SINE MIR -108 154 69 306 309 66 22 chr2 48406562 48406698 -204849885 - L2 LINE L2 -6 3266 3125 382 292 15 31 chr2 48407075 48407205 -204849378 + MIR SINE MIR 26 153 -109 324 195 158 0 chr2 48407425 48407507 -204849076 - MER53 DNA DNA -94 95 1 347 327 12 19 chr2 48407760 48407922 -204848661 + MER103 DNA DNA 4 164 -2 307 251 36 35 chr2 48409813 48409961 -204846622 - MIR SINE MIR -61 147 35 986 96 0 0 chr2 48410529 48410654 -204845929 + AluSg SINE Alu 1 125 -185 925 138 101 0 chr2 48410917 48411055 -204845528 + AluSg SINE Alu 129 280 -30 200 318 31 31 chr2 48411448 48411577 -204845006 + L2 LINE L2 3180 3308 -5 803 200 27 22 chr2 48411655 48411840 -204844743 + LTR41 LTR ERVL 1 186 -587 475 148 0 82 chr2 48412155 48412277 -204844306 + LTR41 LTR ERVL 656 767 -6 435 177 0 13 chr2 48412401 48412480 -204844103 - LTR33A LTR ERVL 0 523 446 667 273 45 5 chr2 48412489 48412687 -204843896 + MIR SINE MIR 57 262 0 1724 158 7 37 chr2 48412995 48413293 -204843290 + AluJb SINE Alu 1 289 -23 210 138 52 0 chr2 48413294 48413352 -204843231 + (TA)n Simple_repeat Simple_repeat 1 61 0 887 203 0 6 chr2 48413567 48413730 -204842853 + AluJb SINE Alu 137 298 -14 443 250 83 7 chr2 48413789 48413933 -204842650 - L1MC/D LINE L1 -1984 5824 5670 191 167 21 42 chr2 48414154 48414202 -204842381 + MIR SINE MIR 162 208 -54 1434 199 47 4 chr2 48415657 48415934 -204840649 - AluJo SINE Alu -19 293 5 417 291 110 6 chr2 48415949 48416131 -204840452 + MLT1H LTR MaLR 1 201 -348 305 234 21 32 chr2 48416235 48416329 -204840254 + MLT1H LTR MaLR 431 523 -26 738 133 158 18 chr2 48416447 48416612 -204839971 + MER53 DNA DNA 2 189 0 25456 63 13 2 chr2 48416860 48422915 -204833668 - L1PA5 LINE L1 -7 6147 1 206 243 29 107 chr2 48422984 48423087 -204833496 - MIR SINE MIR -156 106 12 860 189 6 12 chr2 48423180 48423344 -204833239 - MLT1B LTR MaLR 0 467 305 1746 220 99 12 chr2 48423346 48423797 -204832786 + MLT2B1 LTR ERVL 4 414 0 1229 113 133 67 chr2 48423799 48424039 -204832544 - MLT1B LTR MaLR -134 256 1 196 317 71 12 chr2 48425917 48426131 -204830452 - L3 LINE CR1 -415 1162 889 316 185 202 67 chr2 48426137 48426256 -204830327 + MIR SINE MIR 123 257 -5 716 239 113 28 chr2 48426272 48426485 -204830098 + MIR SINE MIR 30 260 -2 841 342 130 23 chr2 48426542 48427182 -204829401 - L3 LINE CR1 -816 761 54 1609 185 7 13 chr2 48428584 48428892 -204827691 - AluJo SINE Alu -6 306 1 212 151 110 68 chr2 48428930 48429003 -204827580 - MIR SINE MIR -97 111 36 1431 193 119 3 chr2 48429664 48429975 -204826608 + MLT1D LTR MaLR 26 372 -133 189 0 0 0 chr2 48431218 48431239 -204825344 + (CA)n Simple_repeat Simple_repeat 2 22 0 619 269 113 44 chr2 48432329 48432693 -204823890 - MLT1J LTR MaLR -10 501 113 374 227 31 72 chr2 48433599 48433696 -204822887 - MER5B DNA MER1_type -78 100 8 411 257 216 0 chr2 48433708 48433856 -204822727 + MER5A DNA MER1_type 4 183 -6 1437 171 57 0 chr2 48433910 48434191 -204822392 + AluJb SINE Alu 7 303 -9 548 194 104 8 chr2 48435122 48435256 -204821327 - MER45A DNA AcHobo -1 177 31 1904 158 52 49 chr2 48436239 48436529 -204820054 - MLT1B LTR MaLR -3 387 94 1041 46 8 0 chr2 48436529 48436659 -204819924 - L1PB2 LINE L1 0 6151 6021 1904 158 52 49 chr2 48436659 48436753 -204819830 - MLT1B LTR MaLR -296 94 2 280 247 39 0 chr2 48436754 48436831 -204819752 - MIR SINE MIR -118 144 65 192 242 45 61 chr2 48436847 48436913 -204819670 + L2 LINE L2 1166 1230 -2084 605 153 0 0 chr2 48437077 48437188 -204819395 - AluJb SINE Alu 0 312 202 2226 112 0 0 chr2 48437785 48438090 -204818493 + AluSx SINE Alu 3 307 -5 562 265 155 31 chr2 48438107 48438398 -204818185 - MER102a DNA MER1_type -3 327 1 1665 237 78 60 chr2 48439546 48440049 -204816534 + MLT1K LTR MaLR 69 580 -8 1996 168 55 23 chr2 48440444 48440878 -204815705 + L1MB8 LINE L1 5731 6178 0 951 260 21 29 chr2 48440989 48441231 -204815352 + MER115 DNA AcHobo 1 240 -453 1809 110 89 0 chr2 48441233 48441514 -204815069 + AluSq SINE Alu 1 306 -7 715 245 76 30 chr2 48441665 48441902 -204814681 + MER115 DNA AcHobo 446 693 0 638 274 26 0 chr2 48442359 48442512 -204814071 + MER91A DNA MER1_type 18 174 -22 253 230 140 30 chr2 48442507 48442607 -204813976 + MER91A DNA MER1_type 86 196 0 * 252 219 67 67 chr2 48442996 48443101 -204813482 + MER4E LTR ERV1 260 364 -402 * 628 290 80 40 chr2 48443057 48443357 -204813226 + Charlie2 DNA MER1_type 11 322 -2540 * 3161 196 100 23 chr2 48443351 48444297 -204812286 + Charlie2 DNA MER1_type 1838 2856 -6 442 234 16 23 chr2 48445344 48445472 -204811111 + L1ME4a LINE L1 5560 5686 -435 239 295 141 45 chr2 48445619 48445706 -204810877 - MIR SINE MIR -21 241 164 1701 186 7 0 chr2 48445706 48446013 -204810570 - AluJb SINE Alu -2 310 2 239 295 141 45 chr2 48446013 48446081 -204810502 - MIR SINE MIR -98 164 71 247 268 132 70 chr2 48446199 48446427 -204810156 + L1ME4a LINE L1 5878 6119 -2 338 300 0 113 chr2 48446459 48446619 -204809964 + L1ME4a LINE L1 5693 5834 -287 24 32 0 0 chr2 48446736 48446767 -204809816 + AT_rich Low_complexity Low_complexity 1 31 0 201 374 17 17 chr2 48446941 48447056 -204809527 - MIR SINE MIR -59 149 35 319 345 150 10 chr2 48448584 48448784 -204807799 + L2 LINE L2 2709 2936 -378 812 172 0 14 chr2 48448800 48448945 -204807638 + MLT1A1 LTR MaLR 1 143 -222 765 124 9 0 chr2 48448934 48449047 -204807536 + MLT1A1 LTR MaLR 252 365 0 * 489 246 30 30 chr2 48449328 48449462 -204807121 + L2 LINE L2 3180 3313 0 197 211 19 0 chr2 48449599 48449651 -204806932 + CT-rich Low_complexity Low_complexity 1 53 0 2942 108 18 2 chr2 48450250 48450684 -204805899 + LTR56 LTR ERV1 4 444 -1 198 309 52 52 chr2 48452136 48452233 -204804350 - L2 LINE L2 -16 3256 3160 205 322 40 52 chr2 48452990 48453164 -204803419 + L2 LINE L2 2595 2766 -548 1055 168 6 6 chr2 48453195 48453374 -204803209 + AluJo SINE Alu 1 179 -133 820 159 0 0 chr2 48453438 48453570 -204803013 + FRAM SINE Alu 1 40 0 370 328 158 28 chr2 48453639 48454026 -204802557 + L2 LINE L2 2826 3262 -10 2173 85 0 0 chr2 48454026 48454350 -204802233 + AluSg SINE Alu 1 324 0 311 226 0 0 chr2 48454937 48454990 -204801593 - MER45B DNA AcHobo 0 1040 988 2376 83 3 0 chr2 48454991 48455303 -204801280 + AluSq SINE Alu 1 313 0 1075 134 145 94 chr2 48455320 48455596 -204800987 - MER45B DNA AcHobo -36 1004 715 2501 268 89 17 chr2 48455678 48456398 -204800185 - MER45C DNA AcHobo -181 772 1 442 275 81 25 chr2 48457641 48457801 -204798782 - MIR3 SINE MIR -15 193 25 927 214 0 10 chr2 48458115 48458307 -204798276 - L1M4 LINE L1 -3394 2752 2563 2115 113 0 3 chr2 48458345 48458647 -204797936 + AluSc SINE Alu 1 301 -8 313 249 17 156 chr2 48458741 48458805 -204797778 - MER5A DNA MER1_type -1 188 117 2027 135 3 0 chr2 48458805 48459109 -204797474 + AluSq SINE Alu 7 311 -2 313 249 17 156 chr2 48459109 48459217 -204797366 - MER5A DNA MER1_type -72 117 40 3305 242 52 16 chr2 48459226 48461250 -204795333 + L1MB1 LINE L1 976 3144 -3238 770 199 17 50 chr2 48461251 48461432 -204795151 + FRAM SINE Alu 1 175 -1 671 195 50 6 chr2 48461433 48461592 -204794991 + L1MB1 LINE L1 3155 3320 -3062 * 4836 168 20 29 chr2 48461566 48463277 -204793306 + L1MB1 LINE L1 4657 6361 -43 410 0 20 0 chr2 48463277 48463327 -204793256 + (CA)n Simple_repeat Simple_repeat 2 52 0 477 0 0 0 chr2 48463560 48463613 -204792970 + (TG)n Simple_repeat Simple_repeat 2 54 0 787 288 58 0 chr2 48464338 48464564 -204792019 + MIR SINE MIR 24 262 0 444 239 58 45 chr2 48465667 48465822 -204790761 - L1ME3A LINE L1 0 6170 6014 702 220 8 0 chr2 48465881 48466013 -204790570 - FLAM_C SINE Alu 0 133 1 2310 94 0 0 chr2 48466482 48466791 -204789792 - AluY SINE Alu -2 309 1 1343 154 77 39 chr2 48466814 48467099 -204789484 + AluJo SINE Alu 1 296 -16 8165 96 14 1 chr2 48467099 48469020 -204787563 - L1PA8A LINE L1 -29 6102 4162 2416 30 40 0 chr2 48469994 48470291 -204786292 + AluY SINE Alu 1 309 -2 268 267 121 9 chr2 48470730 48470846 -204785737 - Charlie8 DNA MER1_type -2184 233 105 4528 152 23 80 chr2 48470848 48470930 -204785653 - L1MB3 LINE L1 0 6183 6098 1939 125 3 3 chr2 48470930 48471217 -204785366 - AluSq SINE Alu -26 287 1 4528 152 23 80 chr2 48471217 48471851 -204784732 - L1MB3 LINE L1 -85 6098 5534 1685 141 26 35 chr2 48471851 48472018 -204784565 - AluJo SINE Alu -2 310 146 2392 72 0 0 chr2 48472018 48472322 -204784261 - AluY SINE Alu -7 304 1 1685 141 26 35 chr2 48472322 48472467 -204784116 - AluJo SINE Alu -166 146 1 4528 152 23 80 chr2 48472467 48472718 -204783865 - L1MB3 LINE L1 -649 5534 5270 384 238 35 133 chr2 48472807 48473063 -204783520 - MER112 DNA MER1_type -29 231 1 215 295 54 36 chr2 48474176 48474274 -204782309 + L2 LINE L2 3157 3259 -13 1747 157 4 4 chr2 48474274 48474555 -204782028 + AluJo SINE Alu 1 281 -31 215 295 54 36 chr2 48474555 48474568 -204782015 + L2 LINE L2 3259 3270 -2 334 209 19 9 chr2 48475326 48475431 -204781152 - L1MEc LINE L1 -4132 2264 2159 2622 110 3 6 chr2 48475433 48475798 -204780785 - THE1B LTR MaLR 0 364 1 4660 179 49 27 chr2 48475831 48477109 -204779474 - L1MB5 LINE L1 0 6174 4865 789 275 35 28 chr2 48477134 48477191 -204779392 - L1MEc LINE L1 -4258 2138 2083 234 81 0 0 chr2 48477191 48477228 -204779355 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 789 275 35 28 chr2 48477228 48477282 -204779301 - L1MEc LINE L1 -4313 2083 2031 1558 180 17 118 chr2 48477282 48477688 -204778895 + MLT1A1 LTR MaLR 1 365 0 789 275 35 28 chr2 48477688 48477862 -204778721 - L1MEc LINE L1 -4365 2031 1850 327 172 66 16 chr2 48477863 48477985 -204778598 + (TTATA)n Simple_repeat Simple_repeat 5 132 0 468 0 0 0 chr2 48478005 48478057 -204778526 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 1813 166 3 3 chr2 48478068 48478375 -204778208 - AluJo SINE Alu -5 307 1 3375 286 82 20 chr2 48478378 48480076 -204776507 - L1MEc LINE L1 -4533 1863 60 393 288 100 12 chr2 48480155 48480325 -204776258 - LTR67 LTR ERVL -8 549 365 2094 107 3 0 chr2 48481586 48481884 -204774699 - AluSx SINE Alu -13 299 1 230 189 19 38 chr2 48482079 48482132 -204774451 + MLT1L LTR MaLR 155 206 -409 * 723 293 90 42 chr2 48482114 48482538 -204774045 + MLT1K LTR MaLR 135 578 -10 353 370 121 7 chr2 48482829 48483108 -204773475 + L2 LINE L2 2445 2755 -559 398 262 68 0 chr2 48483108 48483211 -204773372 + MIR SINE MIR 2 111 -151 222 37 0 0 chr2 48483428 48483455 -204773128 + (TGG)n Simple_repeat Simple_repeat 3 29 0 952 184 0 0 chr2 48483629 48483792 -204772791 + AluJb SINE Alu 141 303 -9 294 311 72 42 chr2 48484221 48484388 -204772195 - MER91A DNA MER1_type -24 172 1 314 319 47 86 chr2 48484525 48484863 -204771720 + L2 LINE L2 2943 3267 -5 1672 124 7 59 chr2 48484962 48485269 -204771314 + AluSx SINE Alu 22 312 0 243 0 0 0 chr2 48485416 48485443 -204771140 + (T)n Simple_repeat Simple_repeat 1 27 0 546 202 19 9 chr2 48485742 48485869 -204770714 - MIR SINE MIR -63 145 21 308 352 8 8 chr2 48486331 48486459 -204770124 + MIR3 SINE MIR 81 208 0 25 0 0 0 chr2 48486993 48487018 -204769565 + AT_rich Low_complexity Low_complexity 1 25 0 25 114 0 0 chr2 48487342 48487465 -204769118 + GC_rich Low_complexity Low_complexity 1 123 0 300 186 0 62 chr2 48487564 48487661 -204768922 + G-rich Low_complexity Low_complexity 4 94 0 27 62 0 0 chr2 48487711 48487759 -204768824 + GC_rich Low_complexity Low_complexity 1 48 0 186 143 0 0 chr2 48487770 48487805 -204768778 + (CTGGGG)n Simple_repeat Simple_repeat 5 39 0 208 314 26 13 chr2 48488055 48488208 -204768375 + C-rich Low_complexity Low_complexity 2 156 0 241 279 171 27 chr2 48489609 48489720 -204766863 + MIR SINE MIR 122 248 -14 570 224 73 30 chr2 48490307 48490472 -204766111 - MIR SINE MIR -58 204 33 801 95 0 0 chr2 48491212 48491328 -204765255 + (TA)n Simple_repeat Simple_repeat 1 116 0 312 314 120 43 chr2 48491352 48491566 -204765017 + MIR SINE MIR 16 249 -13 186 111 315 0 chr2 48493242 48493296 -204763287 - MIR SINE MIR -78 184 114 221 337 79 0 chr2 48494643 48494732 -204761851 + L2 LINE L2 3173 3268 -4 1334 170 25 79 chr2 48494736 48495053 -204761530 + AluJo SINE Alu 1 300 -12 378 294 83 22 chr2 48495371 48495551 -204761032 + MIR SINE MIR 13 203 -59 419 292 136 0 chr2 48495819 48495973 -204760610 + MIR SINE MIR 2 176 -86 347 273 145 24 chr2 48496695 48496825 -204759758 - MIR SINE MIR -63 145 3 218 237 0 17 chr2 48497491 48497550 -204759033 - L2 LINE L2 0 3272 3215 660 225 118 0 chr2 48497806 48497975 -204758608 + MER5A DNA MER1_type 1 189 0 28 48 0 0 chr2 48498100 48498142 -204758441 + AT_rich Low_complexity Low_complexity 1 42 0 3093 100 15 13 chr2 48498143 48498380 -204758203 - L1MA1 LINE L1 -9 6293 6058 2197 89 7 0 chr2 48498380 48498672 -204757911 - AluSg SINE Alu -16 294 1 3093 100 15 13 chr2 48498672 48498906 -204757677 - L1MA1 LINE L1 -244 6058 5821 30 0 0 0 chr2 48498917 48498947 -204757636 + AT_rich Low_complexity Low_complexity 1 30 0 216 97 0 0 chr2 48499569 48499600 -204756983 + (T)n Simple_repeat Simple_repeat 1 31 0 1547 123 8 16 chr2 48500801 48501053 -204755530 - L1MB7 LINE L1 -126 6058 5809 30 0 0 0 chr2 48501266 48501296 -204755287 + AT_rich Low_complexity Low_complexity 1 30 0 799 259 100 30 chr2 48502003 48502444 -204754139 + L1ME4a LINE L1 5636 6107 -14 386 217 56 93 chr2 48502434 48502595 -204753988 - HAL1 LINE L1 -2 2505 2351 * 3102 235 135 19 chr2 48502601 48503735 -204752848 - HAL1 LINE L1 -220 2287 1022 967 173 0 6 chr2 48503749 48503922 -204752661 - AluSg/x SINE Alu -12 298 127 757 183 0 0 chr2 48503969 48504089 -204752494 - AluJb SINE Alu -189 123 4 300 283 22 11 chr2 48504095 48504187 -204752396 - HAL1 LINE L1 -1490 1017 925 1293 283 140 42 chr2 48504205 48504300 -204752283 - HAL1 LINE L1 -1659 848 764 1078 135 35 83 chr2 48504300 48504530 -204752053 - MER20 DNA MER1_type 0 219 1 1293 283 140 42 chr2 48504530 48505190 -204751393 - HAL1 LINE L1 -1743 764 19 369 0 0 0 chr2 48505799 48505840 -204750743 + (CA)n Simple_repeat Simple_repeat 2 42 0 319 308 9 0 chr2 48505845 48505952 -204750631 + (TA)n Simple_repeat Simple_repeat 1 108 0 239 149 0 0 chr2 48505957 48506004 -204750579 + L1MC4 LINE L1 6657 6703 -1339 384 268 16 113 chr2 48506548 48506742 -204749841 - MIR SINE MIR -66 196 22 451 255 90 21 chr2 48507774 48507919 -204748664 - MIR SINE MIR -35 227 73 219 328 71 32 chr2 48507983 48508162 -204748421 + MIR3 SINE MIR 6 193 -65 872 113 23 23 chr2 48508614 48508747 -204747836 - FLAM_C SINE Alu 0 133 1 734 124 7 83 chr2 48508759 48508820 -204747763 - L1MB5 LINE L1 0 6174 6110 1817 154 3 29 chr2 48508820 48509132 -204747451 + AluJo SINE Alu 1 304 -8 734 124 7 83 chr2 48509132 48509215 -204747368 - L1MB5 LINE L1 -64 6110 6041 210 206 41 0 chr2 48509819 48509892 -204746691 + GA-rich Low_complexity Low_complexity 1 76 0 272 298 26 94 chr2 48509987 48510178 -204746405 - MLT1L LTR MaLR -437 178 1 307 293 21 117 chr2 48510594 48510833 -204745750 - L2 LINE L2 -90 3182 2967 392 310 55 15 chr2 48510905 48511105 -204745478 - L2 LINE L2 -852 2462 2255 183 258 0 79 chr2 48511122 48511211 -204745372 + L2 LINE L2 2326 2407 -907 415 288 146 52 chr2 48511236 48511774 -204744809 + L2 LINE L2 2523 3184 -129 1754 205 36 83 chr2 48511784 48512179 -204744404 - MER20B DNA MER1_type -8 775 363 1846 164 7 0 chr2 48512179 48512489 -204744094 - AluJb SINE Alu 0 312 1 1754 205 36 83 chr2 48512489 48512574 -204744009 - MER20B DNA MER1_type -420 363 324 1569 162 20 56 chr2 48512574 48512877 -204743706 + AluJo SINE Alu 3 294 -8 1754 205 36 83 chr2 48512877 48512968 -204743615 - MER20B DNA MER1_type -459 324 230 1039 146 79 0 chr2 48512968 48513146 -204743437 - LTR47A LTR ERVL 0 452 261 452 313 112 19 chr2 48513353 48513567 -204743016 - MER20B DNA MER1_type -545 238 5 243 214 286 12 chr2 48513600 48513684 -204742899 + L2 LINE L2 3207 3313 0 1981 137 0 3 chr2 48514956 48515262 -204741321 + AluY SINE Alu 1 305 -6 221 333 15 0 chr2 48515799 48515877 -204740706 - MIR SINE MIR -57 151 72 245 290 14 0 chr2 48516319 48516388 -204740195 + L2 LINE L2 3193 3262 -10 195 180 0 60 chr2 48518378 48518428 -204738155 - L2 LINE L2 -6 3307 3261 270 304 62 27 chr2 48518821 48518933 -204737650 + L2 LINE L2 3182 3297 -16 483 307 13 26 chr2 48518934 48519087 -204737496 - MIR3 SINE MIR -1 207 57 575 297 0 0 chr2 48519116 48519264 -204737319 - MIR SINE MIR -96 166 19 197 298 106 39 chr2 48519388 48519492 -204737091 + L2 LINE L2 3185 3295 -18 2272 97 0 3 chr2 48521770 48522073 -204734510 + AluY SINE Alu 6 302 -9 435 216 74 49 chr2 48523202 48523364 -204733219 + MER117 DNA MER1_type 32 197 0 455 277 107 25 chr2 48523366 48523525 -204733058 + MIR SINE MIR 11 182 -80 1119 174 16 21 chr2 48523525 48523715 -204732868 + MER5A DNA MER1_type 1 189 0 246 200 0 0 chr2 48523803 48523848 -204732735 + L2 LINE L2 3209 3253 -19 4031 166 32 36 chr2 48524489 48525273 -204731310 + L1MB4 LINE L1 5400 6180 0 6857 116 133 17 chr2 48527604 48527921 -204728662 + Tigger1 DNA MER2_type 1 280 -2138 261 57 0 0 chr2 48527921 48527956 -204728627 + (TG)n Simple_repeat Simple_repeat 2 36 0 6857 116 133 17 chr2 48527956 48529577 -204727006 + Tigger1 DNA MER2_type 280 2281 -137 2051 143 0 7 chr2 48529577 48529878 -204726705 + AluSx SINE Alu 1 299 -13 6857 116 133 17 chr2 48529878 48530035 -204726548 + Tigger1 DNA MER2_type 2281 2418 0 513 215 129 6 chr2 48530047 48530210 -204726373 + L1ME4a LINE L1 5938 6120 -1 189 171 186 14 chr2 48531047 48531117 -204725466 - MIR3 SINE MIR -25 183 102 210 139 0 0 chr2 48531560 48531596 -204724987 - MIR SINE MIR -65 143 108 217 284 96 106 chr2 48532001 48532209 -204724374 + MIR SINE MIR 23 228 -34 765 268 86 66 chr2 48532221 48532386 -204724197 - L2 LINE L2 -5 3308 3148 2054 110 7 0 chr2 48532386 48532698 -204723885 + AluSx SINE Alu 1 314 0 765 268 86 66 chr2 48532698 48532926 -204723657 - L2 LINE L2 -165 3148 2906 207 318 55 45 chr2 48532883 48532993 -204723590 - MIR SINE MIR -66 142 32 * 234 304 45 27 chr2 48533699 48533811 -204722772 - MIR SINE MIR -67 195 82 2395 62 3 7 chr2 48534961 48535251 -204721332 + AluY SINE Alu 2 290 -21 242 239 0 0 chr2 48537270 48537316 -204719267 - L2 LINE L2 -217 3055 3010 182 327 0 0 chr2 48541659 48541714 -204714869 - MIR SINE MIR -12 250 196 632 277 108 9 chr2 48541732 48541945 -204714638 + MIR SINE MIR 4 237 -25 2304 95 7 3 chr2 48543041 48543345 -204713238 - AluSg SINE Alu -5 305 1 216 0 0 0 chr2 48543378 48543402 -204713181 + (T)n Simple_repeat Simple_repeat 1 24 0 288 0 0 0 chr2 48543986 48544018 -204712565 + (CA)n Simple_repeat Simple_repeat 1 32 0 436 294 27 27 chr2 48544512 48544540 -204712043 + MIR3 SINE MIR 32 59 -149 2340 79 13 7 chr2 48544540 48544843 -204711740 - AluSq SINE Alu -8 305 1 436 294 27 27 chr2 48544843 48544960 -204711623 + MIR3 SINE MIR 58 177 -31 22 35 0 0 chr2 48545143 48545172 -204711411 + AT_rich Low_complexity Low_complexity 1 29 0 27 49 0 0 chr2 48549044 48549085 -204707498 + GC_rich Low_complexity Low_complexity 1 41 0 1960 118 31 3 chr2 48550354 48550643 -204705940 - AluSx SINE Alu -15 297 1 191 154 19 96 chr2 48550760 48550812 -204705771 + L2 LINE L2 3167 3214 -99 1923 149 48 0 chr2 48551211 48551506 -204705077 - AluJb SINE Alu -3 309 1 2119 122 14 0 chr2 48552169 48552463 -204704120 - AluSx SINE Alu -14 298 1 250 280 140 0 chr2 48553197 48553297 -204703286 - MIR SINE MIR -10 252 139 396 0 0 0 chr2 48554503 48554547 -204702036 + (CA)n Simple_repeat Simple_repeat 1 44 0 955 273 24 8 chr2 48554601 48554850 -204701733 + MIR SINE MIR 9 261 -1 793 265 73 8 chr2 48555813 48556058 -204700525 - MIR SINE MIR 0 262 2 2224 91 0 50 chr2 48556500 48556818 -204699765 - AluY SINE Alu -9 302 1 342 274 156 34 chr2 48557112 48557480 -204699103 + L1ME LINE L1 5255 5680 -441 * 905 135 62 141 chr2 48557466 48557554 -204699029 + L1MA7 LINE L1 6009 6102 -189 1900 121 0 77 chr2 48557554 48557867 -204698716 + AluJb SINE Alu 2 290 -22 905 135 62 141 chr2 48557867 48558082 -204698501 + L1MA7 LINE L1 6102 6288 -3 2314 239 195 27 chr2 48558249 48558672 -204697911 + L2 LINE L2 1941 2292 -1022 1994 111 31 3 chr2 48558672 48558961 -204697622 + AluSp SINE Alu 1 297 -16 2314 239 195 27 chr2 48558961 48559423 -204697160 + L2 LINE L2 2292 2975 -339 579 219 224 77 chr2 48559436 48559837 -204696746 + L2 LINE L2 2849 3308 -5 248 239 91 11 chr2 48562398 48562486 -204694097 + MIR3 SINE MIR 114 208 0 199 225 113 14 chr2 48564560 48564631 -204691952 + MIR SINE MIR 85 162 -100 2511 54 0 3 chr2 48564883 48565177 -204691406 - AluY SINE Alu -18 293 1 217 342 68 32 chr2 48567072 48567262 -204689321 + MIR SINE MIR 56 252 -10 183 80 0 0 chr2 48567742 48567767 -204688816 + (TG)n Simple_repeat Simple_repeat 2 26 0 25 31 0 0 chr2 48568392 48568424 -204688159 + AT_rich Low_complexity Low_complexity 1 32 0 318 233 139 47 chr2 48569271 48569529 -204687054 + L1MC4a LINE L1 5617 5898 -223 363 254 50 27 chr2 48569546 48569710 -204686873 + HAL1b LINE L1 1195 6120 -1 344 330 51 10 chr2 48569741 48569938 -204686645 + L1MB7 LINE L1 5612 5816 -305 459 145 24 0 chr2 48569974 48570057 -204686526 + MIR SINE MIR 85 169 -93 705 207 0 22 chr2 48570318 48570453 -204686130 + FLAM_A SINE Alu 1 132 -1 331 159 0 16 chr2 48571315 48571378 -204685205 - L1MC/D LINE L1 -1988 5820 5759 2295 97 7 0 chr2 48571378 48571677 -204684906 - AluSg SINE Alu -9 301 1 2338 91 0 3 chr2 48572783 48573080 -204683503 - AluSg SINE Alu -14 296 1 1439 87 73 23 chr2 48573087 48573306 -204683277 - AluSq SINE Alu -3 310 81 3884 137 32 9 chr2 48573375 48574062 -204682521 - L1MB8 LINE L1 -35 6143 5441 2073 114 3 3 chr2 48574179 48574476 -204682107 + AluSg SINE Alu 1 297 -13 1250 267 136 65 chr2 48574743 48575656 -204680927 - HAL1 LINE L1 0 2507 1434 2299 99 3 0 chr2 48575656 48575958 -204680625 - AluSx SINE Alu -9 303 1 1250 267 136 65 chr2 48575958 48576618 -204679965 - HAL1 LINE L1 -1073 1434 822 1068 167 47 39 chr2 48576625 48576677 -204679906 + L1MB7 LINE L1 5924 5974 -210 1606 102 18 0 chr2 48576677 48576902 -204679681 - MER30 DNA MER1_type -1 229 1 1068 167 47 39 chr2 48576902 48577106 -204679477 + L1MB7 LINE L1 5974 6182 -2 354 283 22 0 chr2 48577239 48577331 -204679252 - HAL1 LINE L1 -1837 670 577 239 282 80 25 chr2 48578573 48578736 -204677847 + L1ME LINE L1 5615 5786 -335 238 241 115 11 chr2 48578941 48579028 -204677555 + MLT1L LTR MaLR 497 592 -23 28 0 0 0 chr2 48579149 48579177 -204677406 + AT_rich Low_complexity Low_complexity 1 28 0 265 200 46 62 chr2 48579635 48579700 -204676883 - L2 LINE L2 -18 3254 3191 6858 122 20 13 chr2 48581096 48583256 -204673327 + L1MA3 LINE L1 4125 6305 0 279 325 128 21 chr2 48583799 48583943 -204672640 - MIR SINE MIR -71 191 32 424 271 62 8 chr2 48583979 48584108 -204672475 + MIR SINE MIR 48 183 -79 585 268 123 51 chr2 48584581 48584932 -204671651 - L1MC4a LINE L1 -1879 5929 5554 1871 138 22 24 chr2 48584962 48585331 -204671252 + L1MB8 LINE L1 5612 5979 -205 349 169 13 0 chr2 48585332 48585409 -204671174 + L1MB8 LINE L1 6101 6178 0 14249 121 39 23 chr2 48585622 48585938 -204670645 - Tigger1 DNA MER2_type 0 2418 2109 2277 108 0 10 chr2 48585938 48586244 -204670339 - AluSx SINE Alu -9 303 1 14249 121 39 23 chr2 48586244 48588307 -204668276 - Tigger1 DNA MER2_type -309 2109 1 2473 82 0 0 chr2 48588773 48589076 -204667507 - AluSx SINE Alu -9 303 1 2291 93 10 0 chr2 48589453 48589744 -204666839 + AluSc SINE Alu 1 294 -15 189 147 0 0 chr2 48590186 48590220 -204666363 + (T)n Simple_repeat Simple_repeat 1 34 0 32 43 0 0 chr2 48590423 48590469 -204666114 + AT_rich Low_complexity Low_complexity 1 46 0 580 199 152 53 chr2 48590986 48591157 -204665426 - MER5A DNA MER1_type -1 188 1 180 77 0 0 chr2 48591281 48591307 -204665276 + (TA)n Simple_repeat Simple_repeat 1 26 0 201 74 0 0 chr2 48591331 48591358 -204665225 + (TATATG)n Simple_repeat Simple_repeat 4 30 0 193 176 137 0 chr2 48594411 48594462 -204662121 - MIR SINE MIR -66 142 85 180 77 0 0 chr2 48595481 48595507 -204661076 + (CTG)n Simple_repeat Simple_repeat 2 27 0 232 310 81 35 chr2 48596669 48596756 -204659827 + L2 LINE L2 3178 3268 -4 306 289 82 29 chr2 48598217 48598331 -204658252 + MIR SINE MIR 17 127 -81 1706 171 7 7 chr2 48598413 48598705 -204657878 + AluJb SINE Alu 1 292 -20 482 299 23 6 chr2 48598714 48598888 -204657695 + L2 LINE L2 1730 1906 -1408 207 43 109 0 chr2 48598926 48598972 -204657611 + (TA)n Simple_repeat Simple_repeat 2 52 0 1283 291 171 29 chr2 48598975 48599955 -204656628 + L2 LINE L2 2209 3313 0 2545 50 0 3 chr2 48600334 48600632 -204655951 + AluY SINE Alu 1 297 -14 2253 106 3 0 chr2 48600778 48601071 -204655512 + AluSx SINE Alu 1 294 -18 31 0 0 0 chr2 48602258 48602289 -204654294 + AT_rich Low_complexity Low_complexity 1 31 0 192 77 0 0 chr2 48602289 48602315 -204654268 + (TTTTC)n Simple_repeat Simple_repeat 5 30 0 1657 186 13 3 chr2 48603310 48603616 -204652967 - AluJo SINE Alu -3 309 1 252 0 0 0 chr2 48603622 48603650 -204652933 + (T)n Simple_repeat Simple_repeat 1 28 0 5018 133 29 59 chr2 48604195 48605074 -204651509 - L1PA16 LINE L1 -9 6157 5253 2255 115 0 0 chr2 48605074 48605379 -204651204 - AluSq SINE Alu -8 305 1 5018 133 29 59 chr2 48605379 48605688 -204650895 - L1PA16 LINE L1 -913 5253 4936 2080 135 0 20 chr2 48605688 48605991 -204650592 - AluSx SINE Alu -15 297 1 5018 133 29 59 chr2 48605991 48606352 -204650231 - L1PA16 LINE L1 -1230 4936 4643 2171 112 0 7 chr2 48606352 48606655 -204649928 - AluSg SINE Alu -8 302 2 5018 133 29 59 chr2 48606655 48606837 -204649746 - L1PA16 LINE L1 -1523 4643 4457 2229 246 87 3 chr2 48607516 48608249 -204648334 - L1MC4 LINE L1 -151 7891 7097 2668 212 66 24 chr2 48608272 48608603 -204647980 - L1MC4 LINE L1 -143 7899 7583 1509 69 5 10 chr2 48608603 48608807 -204647776 - L1PA16 LINE L1 0 6166 5964 2668 212 66 24 chr2 48608807 48609236 -204647347 - L1MC4 LINE L1 -459 7583 7107 1093 223 121 4 chr2 48609247 48609551 -204647032 - L1MC4a LINE L1 -1044 6764 6442 27 29 0 0 chr2 48609570 48609604 -204646979 + AT_rich Low_complexity Low_complexity 1 34 0 2266 107 7 0 chr2 48609860 48610159 -204646424 + AluSx SINE Alu 1 301 -11 1795 181 0 16 chr2 48610256 48610559 -204646024 + AluJo SINE Alu 12 309 -3 189 107 0 0 chr2 48610589 48610617 -204645966 + (A)n Simple_repeat Simple_repeat 1 28 0 22 0 0 0 chr2 48610957 48610979 -204645604 + AT_rich Low_complexity Low_complexity 1 22 0 343 381 82 16 chr2 48610984 48611228 -204645355 + L1MEd LINE L1 106 365 -5754 1790 166 20 20 chr2 48611383 48611678 -204644905 + AluJo SINE Alu 1 295 -17 993 146 0 0 chr2 48611702 48611846 -204644737 + AluJb SINE Alu 145 288 -24 2233 114 3 0 chr2 48612114 48612412 -204644171 + AluSx SINE Alu 1 299 -13 349 263 95 0 chr2 48612431 48612526 -204644057 + L1MEd LINE L1 1040 1143 -4976 2336 94 0 0 chr2 48612558 48612856 -204643727 - AluSg SINE Alu -12 298 1 432 270 227 27 chr2 48613229 48613529 -204643054 - L2 LINE L2 -4 3309 2950 2048 225 114 41 chr2 48614306 48614438 -204642145 - HAL1 LINE L1 -631 1876 1755 1730 139 0 21 chr2 48614438 48614718 -204641865 - AluJo SINE Alu -1 311 38 2048 225 114 41 chr2 48614718 48615439 -204641144 - HAL1 LINE L1 -752 1755 961 1830 228 40 38 chr2 48615451 48616148 -204640435 - L1MEc LINE L1 -3406 2809 2142 2186 105 3 26 chr2 48616148 48616453 -204640130 - AluSg SINE Alu -12 298 1 1830 228 40 38 chr2 48616453 48616474 -204640109 - L1MEc LINE L1 -4073 2142 2123 333 263 90 13 chr2 48616524 48616680 -204639903 - L1MEc LINE L1 -6218 178 11 314 225 108 0 chr2 48616676 48616796 -204639787 - HAL1 LINE L1 -1543 964 832 * 1933 159 20 0 chr2 48616796 48617097 -204639486 - AluJb SINE Alu -4 308 2 920 92 11 103 chr2 48617216 48617372 -204639211 - MER20 DNA MER1_type -17 202 62 2323 90 13 0 chr2 48617372 48617673 -204638910 + AluSx SINE Alu 1 305 -7 920 92 11 103 chr2 48617673 48617690 -204638893 - MER20 DNA MER1_type -157 62 45 985 296 100 29 chr2 48617716 48618237 -204638346 - HAL1 LINE L1 -1757 750 193 2110 143 3 0 chr2 48618377 48618677 -204637906 + AluSx SINE Alu 1 301 -11 2070 127 7 0 chr2 48618679 48618999 -204637584 + AluSx SINE Alu 1 322 0 2194 102 24 0 chr2 48619494 48619787 -204636796 - AluSc SINE Alu -9 300 1 1865 175 0 0 chr2 48619988 48620291 -204636292 + AluJo SINE Alu 4 306 -6 777 138 0 0 chr2 48620300 48620409 -204636174 + AluJb SINE Alu 1 109 -203 243 0 0 0 chr2 48620414 48620441 -204636142 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5741 134 27 36 chr2 48620807 48621888 -204634695 - MER11C LTR ERVK 0 1071 1 2354 81 0 3 chr2 48622511 48622808 -204633775 + AluY SINE Alu 1 296 -15 799 186 224 0 chr2 48622948 48623131 -204633452 + MER58A DNA MER1_type 1 224 0 188 330 13 85 chr2 48624263 48624499 -204632084 + L2 LINE L2 2976 3194 -78 202 200 0 0 chr2 48624674 48624709 -204631874 + CT-rich Low_complexity Low_complexity 2 36 0 311 255 32 11 chr2 48626954 48627048 -204629535 - MIR3 SINE MIR -6 202 107 436 244 181 0 chr2 48627972 48628099 -204628484 - MER5A DNA MER1_type -31 158 9 351 321 104 10 chr2 48628655 48628848 -204627735 + MIR SINE MIR 20 230 -32 582 266 21 26 chr2 48629040 48629232 -204627351 - L2 LINE L2 0 3313 3123 265 276 120 15 chr2 48629504 48629645 -204626938 - MIR SINE MIR -96 112 1 332 274 12 12 chr2 48630056 48630140 -204626443 + MER81 DNA DNA 28 111 -3 418 290 16 8 chr2 48630401 48630525 -204626058 + MIR SINE MIR 108 232 -30 207 313 31 0 chr2 48630699 48630763 -204625820 + MIR SINE MIR 11 76 -186 620 233 33 0 chr2 48631026 48631176 -204625407 - MIR SINE MIR -31 231 77 387 306 19 25 chr2 48631181 48631338 -204625245 + MIR SINE MIR 88 243 -19 291 270 190 0 chr2 48633870 48634007 -204622576 - MIR SINE MIR -8 254 92 674 110 0 0 chr2 48634008 48634099 -204622484 + AluJ/FLAM SINE Alu 2 92 -220 329 261 26 9 chr2 48634257 48634372 -204622211 + MIR3 SINE MIR 69 185 -23 24 32 0 0 chr2 48634813 48634844 -204621739 + AT_rich Low_complexity Low_complexity 1 31 0 200 268 0 36 chr2 48634954 48635010 -204621573 + (CATA)n Simple_repeat Simple_repeat 4 57 0 2471 84 0 3 chr2 48635838 48636146 -204620437 - AluSq SINE Alu -6 307 1 189 0 0 0 chr2 48636640 48636661 -204619922 + (A)n Simple_repeat Simple_repeat 1 21 0 25 0 0 0 chr2 48637437 48637462 -204619121 + GC_rich Low_complexity Low_complexity 1 25 0 262 254 0 0 chr2 48637489 48637548 -204619035 + G-rich Low_complexity Low_complexity 2 60 0 212 222 0 86 chr2 48637749 48637866 -204618717 + C-rich Low_complexity Low_complexity 3 109 0 1165 239 92 26 chr2 48638603 48638993 -204617590 + LTR33 LTR ERVL 3 418 -103 602 216 88 57 chr2 48638999 48639226 -204617357 - MER106A DNA MER1_type -1 235 2 1383 269 67 57 chr2 48639420 48640467 -204616116 - L1ME3A LINE L1 -219 5951 4915 1099 41 47 12 chr2 48640467 48640638 -204615945 + (TTTC)n Simple_repeat Simple_repeat 2 178 0 1935 128 0 11 chr2 48640644 48640926 -204615657 - AluJb SINE Alu -33 279 1 1383 269 67 57 chr2 48640926 48641045 -204615538 - L1ME3A LINE L1 -1259 4911 4795 2206 123 0 0 chr2 48641045 48641355 -204615228 - AluY SINE Alu -1 310 1 1383 269 67 57 chr2 48641355 48641500 -204615083 - L1ME3A LINE L1 -1375 4795 4616 313 209 0 0 chr2 48642071 48642138 -204614445 - MIR SINE MIR -10 252 186 333 0 0 0 chr2 48643114 48643151 -204613432 + (TG)n Simple_repeat Simple_repeat 1 37 0 761 229 11 21 chr2 48643238 48643426 -204613157 - MER5A DNA MER1_type -3 186 1 404 271 7 77 chr2 48643426 48643581 -204613002 - MIR3 SINE MIR -48 160 17 2410 103 0 0 chr2 48645189 48645499 -204611084 - AluSx SINE Alu -2 310 1 21 0 0 0 chr2 48646558 48646579 -204610004 + AT_rich Low_complexity Low_complexity 1 21 0 304 292 131 15 chr2 48649775 48649912 -204606671 - MIR3 SINE MIR -40 168 16 224 290 92 106 chr2 48650058 48650417 -204606166 + L2 LINE L2 2919 3272 0 2306 105 0 0 chr2 48652994 48653288 -204603295 + AluSx SINE Alu 1 294 -18 277 114 0 0 chr2 48654921 48654965 -204601618 + L1M4c LINE L1 12 55 -6329 801 132 16 39 chr2 48655624 48655753 -204600830 - FLAM_C SINE Alu -3 130 5 814 325 48 16 chr2 48656176 48656347 -204600236 + HAL1b LINE L1 72 236 -1112 429 20 0 0 chr2 48656347 48656397 -204600186 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 814 325 48 16 chr2 48656397 48656794 -204599789 + HAL1b LINE L1 236 658 -690 790 133 7 22 chr2 48656831 48656966 -204599617 + FLAM_C SINE Alu 1 133 0 35 0 0 0 chr2 48657095 48657130 -204599453 + AT_rich Low_complexity Low_complexity 1 35 0 858 147 0 0 chr2 48657133 48657249 -204599334 - FLAM_C SINE Alu -25 118 3 2339 104 0 3 chr2 48657402 48657709 -204598874 + AluSc SINE Alu 1 306 -3 459 48 0 0 chr2 48657727 48657789 -204598794 + (TA)n Simple_repeat Simple_repeat 2 63 0 2956 210 43 68 chr2 48657805 48658735 -204597848 + L1MC5 LINE L1 6625 7531 -430 1849 116 12 0 chr2 48658939 48659190 -204597393 + AluSq SINE Alu 1 254 -59 2112 124 0 0 chr2 48659192 48659518 -204597065 + AluSx SINE Alu 1 326 0 2149 123 36 3 chr2 48660492 48660794 -204595789 - AluSx SINE Alu 0 312 1 182 246 148 0 chr2 48661913 48661974 -204594609 - MIR SINE MIR -64 144 75 2815 7 0 10 chr2 48662991 48663298 -204593285 - AluYa5 SINE Alu -7 304 1 405 316 10 47 chr2 48665161 48665354 -204591229 + MIR SINE MIR 7 192 -70 734 151 0 58 chr2 48667281 48667448 -204589135 + FLAM_C SINE Alu 1 133 0 467 298 35 25 chr2 48667451 48667649 -204588934 - MLT1K LTR MaLR -60 528 329 2052 137 3 10 chr2 48668329 48668643 -204587940 + AluJb SINE Alu 1 312 0 1736 142 0 4 chr2 48669317 48669571 -204587012 + AluSq SINE Alu 1 253 -60 1809 88 4 0 chr2 48670123 48670349 -204586234 - AluSg SINE Alu -83 227 1 1222 222 113 28 chr2 48670472 48670905 -204585678 + L1MC4a LINE L1 5631 6100 -1708 2305 209 117 43 chr2 48670962 48671636 -204584947 - MER44D DNA MER2_type 0 605 10 24 0 0 0 chr2 48671669 48671693 -204584890 + AT_rich Low_complexity Low_complexity 1 24 0 341 333 18 0 chr2 48672219 48672330 -204584253 + L2 LINE L2 3140 3252 -20 1196 291 120 24 chr2 48672335 48672592 -204583991 + L2 LINE L2 2419 2650 -663 865 227 0 0 chr2 48672592 48672755 -204583828 - FRAM SINE Alu -3 163 1 1196 291 120 24 chr2 48672755 48673296 -204583287 + L2 LINE L2 2650 3312 -1 2079 139 0 3 chr2 48673451 48673753 -204582830 + AluJb SINE Alu 1 301 -11 2330 97 0 10 chr2 48673887 48674197 -204582386 + AluSq SINE Alu 1 307 -6 447 298 24 44 chr2 48674320 48674525 -204582058 - MIR SINE MIR -56 206 6 200 375 48 0 chr2 48674594 48674698 -204581885 - L2 LINE L2 -213 3059 2951 415 321 43 0 chr2 48675184 48675324 -204581259 - L2 LINE L2 -964 2350 2205 554 224 14 14 chr2 48675329 48675472 -204581111 + L1ME2 LINE L1 6002 6144 -20 289 216 128 10 chr2 48676209 48676311 -204580272 + MIR SINE MIR 137 250 -12 307 298 123 18 chr2 48677271 48677385 -204579198 - L2 LINE L2 -4 3268 3143 566 227 129 46 chr2 48677576 48677770 -204578813 + L2 LINE L2 3104 3313 0 201 324 167 54 chr2 48677724 48678478 -204578105 - L2 LINE L2 -663 2651 1813 * 787 137 0 43 chr2 48678616 48678755 -204577828 + FLAM_C SINE Alu 1 133 0 302 227 212 30 chr2 48679518 48679650 -204576933 - MIR3 SINE MIR -23 185 30 503 257 72 33 chr2 48680144 48680296 -204576287 + MIR SINE MIR 50 207 -55 357 295 36 43 chr2 48682946 48683085 -204573498 + MER21B LTR ERV1 98 235 -628 2063 203 28 65 chr2 48683118 48683656 -204572927 + MER21B LTR ERV1 345 862 -1 221 309 11 21 chr2 48683865 48683959 -204572624 + L3 LINE CR1 612 704 -873 437 289 105 15 chr2 48684260 48684465 -204572118 - MIR SINE MIR -12 250 30 181 329 82 14 chr2 48684774 48684847 -204571736 + MIR3 SINE MIR 12 89 -119 230 201 49 201 chr2 48684979 48685123 -204571460 + MIR SINE MIR 91 212 -50 180 302 168 59 chr2 48685667 48685869 -204570714 - L2 LINE L2 -449 2865 2642 1935 91 4 4 chr2 48685895 48686159 -204570424 - Tigger5 DNA MER2_type 0 2323 2060 424 298 186 32 chr2 48686249 48686652 -204569931 - L2 LINE L2 -663 2651 2187 2147 95 3 0 chr2 48687013 48687296 -204569287 - AluSc SINE Alu -5 304 21 330 306 0 65 chr2 48688042 48688166 -204568417 - MER5A DNA MER1_type 0 189 74 2126 118 10 7 chr2 48688271 48688577 -204568006 - AluSg SINE Alu -3 307 1 308 103 0 35 chr2 48688586 48688644 -204567939 - L1ME2 LINE L1 0 6164 6109 575 226 0 8 chr2 48688679 48688812 -204567771 + L1M4 LINE L1 3923 4054 -2092 2390 216 128 26 chr2 48688850 48690340 -204566243 - L1ME2 LINE L1 -28 6205 4556 4709 243 94 73 chr2 48690360 48690469 -204566114 - L1ME2 LINE L1 -2098 4117 4012 2533 69 0 0 chr2 48690469 48690774 -204565809 - AluSg SINE Alu -5 305 1 4709 243 94 73 chr2 48690774 48691206 -204565377 - L1ME2 LINE L1 -2203 4012 3591 1850 168 0 0 chr2 48691206 48691497 -204565086 + AluJb SINE Alu 1 291 -21 4709 243 94 73 chr2 48691497 48692746 -204563837 - L1ME2 LINE L1 -2624 3591 2370 604 153 0 0 chr2 48692746 48692831 -204563752 + MER58A DNA MER1_type 4 88 -19 4709 243 94 73 chr2 48692831 48693241 -204563342 - L1ME2 LINE L1 -3845 2370 1970 1666 163 0 17 chr2 48693241 48693536 -204563047 + AluJb SINE Alu 23 312 0 4709 243 94 73 chr2 48693536 48694602 -204561981 - L1ME2 LINE L1 -4245 1970 929 198 71 0 0 chr2 48694602 48694630 -204561953 + (TTAA)n Simple_repeat Simple_repeat 1 28 0 1480 212 11 4 chr2 48694630 48694908 -204561675 - AluJo SINE Alu -32 280 1 4709 243 94 73 chr2 48694908 48695623 -204560960 - L1ME2 LINE L1 -5285 930 19 560 284 4 31 chr2 48695603 48695832 -204560751 - L1MEc LINE L1 -4754 1642 1420 * 683 289 93 66 chr2 48695839 48696228 -204560355 - L1MEc LINE L1 -5758 638 226 207 0 0 0 chr2 48696228 48696251 -204560332 + (TG)n Simple_repeat Simple_repeat 2 24 0 683 289 93 66 chr2 48696251 48696449 -204560134 - L1MEc LINE L1 -6170 226 35 22 0 0 0 chr2 48696689 48696711 -204559872 + AT_rich Low_complexity Low_complexity 1 22 0 351 248 29 29 chr2 48696771 48696908 -204559675 - HAL1b LINE L1 -284 1064 928 692 229 83 5 chr2 48696964 48697169 -204559414 + L1ME LINE L1 5527 5747 -374 22 0 0 0 chr2 48698084 48698106 -204558477 + AT_rich Low_complexity Low_complexity 1 22 0 432 205 90 8 chr2 48698223 48698345 -204558238 + MIR SINE MIR 100 231 -31 201 229 21 0 chr2 48698811 48698859 -204557724 - MIR3 SINE MIR -48 160 112 2573 213 49 18 chr2 48700579 48701501 -204555082 - L1MD2 LINE L1 -471 5888 4941 * 2837 226 64 45 chr2 48701500 48702533 -204554050 - L1M4 LINE L1 -1076 5464 4412 3122 230 117 39 chr2 48702539 48704227 -204552356 - L1MDb LINE L1 -3027 3513 1958 2187 109 0 10 chr2 48704227 48704529 -204552054 - AluSg SINE Alu -11 299 1 3122 230 117 39 chr2 48704529 48704871 -204551712 - L1MDb LINE L1 -4582 1958 1644 2237 92 3 0 chr2 48704871 48705188 -204551395 - AluSp SINE Alu 0 318 1 3122 230 117 39 chr2 48705188 48705273 -204551310 - L1MDb LINE L1 -4896 1644 1223 1186 43 0 0 chr2 48705274 48705413 -204551170 - AluY SINE Alu -5 306 168 968 224 24 72 chr2 48705413 48705748 -204550835 - L1MDb LINE L1 -5316 1227 909 318 300 146 45 chr2 48705793 48706013 -204550570 - L1MDb LINE L1 -5575 955 714 374 363 69 33 chr2 48706229 48706474 -204550109 - L1MDb LINE L1 -6253 287 34 233 204 366 0 chr2 48706548 48706641 -204549942 - MIR SINE MIR -18 244 118 1973 149 3 3 chr2 48706688 48706983 -204549600 - AluSx SINE Alu -11 301 7 946 196 27 5 chr2 48707036 48707220 -204549363 + MER5A DNA MER1_type 1 188 -1 3680 131 105 5 chr2 48707466 48707803 -204548780 - Tigger3(Golem) DNA MER2_type -1 3028 2726 191 88 29 0 chr2 48707803 48707837 -204548746 + (TGAG)n Simple_repeat Simple_repeat 4 38 0 3680 131 105 5 chr2 48707837 48708173 -204548410 - Tigger3(Golem) DNA MER2_type -303 2726 2287 636 183 25 8 chr2 48708161 48708281 -204548302 - Tigger3(Golem) DNA MER2_type -2907 122 1 * 2226 91 3 0 chr2 48708451 48708737 -204547846 + AluSx SINE Alu 1 287 -25 234 342 9 27 chr2 48709197 48709252 -204547331 - L2 LINE L2 -30 3283 3229 1885 164 30 35 chr2 48709252 48709618 -204546965 + MLT1A1 LTR MaLR 1 364 -1 234 342 9 27 chr2 48709618 48709673 -204546910 - L2 LINE L2 -84 3229 3175 377 315 65 53 chr2 48710393 48710830 -204545753 - L2 LINE L2 -177 3095 2652 2118 140 0 0 chr2 48711220 48711527 -204545056 - AluSx SINE Alu -5 307 1 795 178 63 35 chr2 48711555 48711729 -204544854 + AluJb SINE Alu 132 310 -2 266 292 169 8 chr2 48713080 48713210 -204543373 + L2 LINE L2 2909 3059 -213 691 254 127 45 chr2 48713211 48713623 -204542960 - MLT1J LTR MaLR 0 511 1 326 332 144 32 chr2 48713635 48713822 -204542761 + L2 LINE L2 3065 3272 0 323 75 0 0 chr2 48714066 48714119 -204542464 - L1MB4 LINE L1 0 6180 6128 199 200 14 29 chr2 48714119 48714189 -204542394 + CT-rich Low_complexity Low_complexity 5 73 0 1650 182 7 7 chr2 48714189 48714475 -204542108 - AluJo SINE Alu -26 286 1 2628 113 20 0 chr2 48714475 48714875 -204541708 - L1MB3 LINE L1 -41 6142 5735 1378 128 49 4 chr2 48714919 48715145 -204541438 - MER46A DNA MER2_type 0 236 1 191 343 96 15 chr2 48716379 48716577 -204540006 - L2 LINE L2 -655 2659 2446 323 266 78 112 chr2 48717606 48718027 -204538556 - L1ME3A LINE L1 -7 6163 5757 1238 139 6 0 chr2 48719372 48719552 -204537031 - AluSg/x SINE Alu -12 300 120 347 91 0 0 chr2 48719556 48719600 -204536983 - Alu SINE Alu -259 44 1 771 311 65 15 chr2 48719770 48720169 -204536414 - L1ME4a LINE L1 -200 5921 5503 419 237 30 30 chr2 48720382 48720470 -204536113 - FLAM_A SINE Alu -171 131 41 189 0 0 0 chr2 48720470 48720491 -204536092 + (CCCCCA)n Simple_repeat Simple_repeat 5 25 0 419 237 30 30 chr2 48720491 48720533 -204536050 - FLAM_A SINE Alu -260 42 1 24 0 0 0 chr2 48720544 48720568 -204536015 + AT_rich Low_complexity Low_complexity 1 24 0 2161 120 0 0 chr2 48720804 48721096 -204535487 - AluSg SINE Alu -18 292 1 3879 87 30 2 chr2 48721302 48721841 -204534742 - MER41A LTR ERV1 0 554 1 2168 126 0 0 chr2 48722120 48722422 -204534161 - AluSx SINE Alu -10 302 1 2249 94 3 3 chr2 48722661 48722960 -204533623 - AluSq SINE Alu -14 299 1 187 336 71 0 chr2 48724238 48724351 -204532232 - L2 LINE L2 -648 2666 2546 2292 77 14 0 chr2 48724506 48724792 -204531791 + AluY SINE Alu 5 294 -17 619 218 28 79 chr2 48724841 48725093 -204531490 - L1M4 LINE L1 -1774 4372 4134 477 261 68 0 chr2 48725186 48725362 -204531221 - L1M4 LINE L1 -2618 3528 3341 1818 175 18 0 chr2 48725363 48725648 -204530935 - AluJb SINE Alu -22 290 1 1772 167 13 10 chr2 48726311 48726617 -204529966 - AluJb SINE Alu -3 309 3 297 368 54 12 chr2 48728127 48728326 -204528257 - MIR SINE MIR -53 209 6 387 238 182 21 chr2 48729216 48729359 -204527224 + MIR SINE MIR 96 261 -1 336 220 11 22 chr2 48729613 48729704 -204526879 + L1ME4a LINE L1 5946 6035 -86 1744 195 15 9 chr2 48729922 48730261 -204526322 + MER58B DNA MER1_type 1 341 0 1135 120 176 23 chr2 48730317 48730533 -204526050 + MER1B DNA MER1_type 131 339 0 243 228 50 30 chr2 48730727 48730828 -204525755 - L1ME LINE L1 -286 5884 5782 328 315 134 50 chr2 48730882 48731180 -204525403 + L2 LINE L2 2340 2662 -652 458 341 128 9 chr2 48731197 48731408 -204525175 + L2 LINE L2 2824 3059 -254 4253 106 9 5 chr2 48731650 48732280 -204524303 - MER41B LTR ERV1 0 635 3 251 93 23 0 chr2 48732810 48732853 -204523730 + MER116 DNA Mariner 37 80 0 745 201 138 16 chr2 48734461 48734650 -204521933 - MER58C DNA MER1_type -3 212 1 326 164 0 15 chr2 48734658 48734725 -204521858 - Charlie5 DNA MER1_type 0 2624 2559 22 35 0 0 chr2 48734799 48734828 -204521755 + AT_rich Low_complexity Low_complexity 1 29 0 253 298 26 53 chr2 48734828 48734979 -204521604 - L2 LINE L2 -2566 748 602 2356 102 3 0 chr2 48735717 48736021 -204520562 + AluSx SINE Alu 1 305 -7 207 245 19 0 chr2 48741035 48741088 -204515495 + (TA)n Simple_repeat Simple_repeat 2 55 0 2335 88 10 3 chr2 48741705 48742013 -204514570 - AluSq SINE Alu -3 310 1 1023 276 166 24 chr2 48742456 48743279 -204513304 - L2 LINE L2 -3 3310 2260 1319 149 20 5 chr2 48743301 48743502 -204513081 + AluJo SINE Alu 1 204 -108 272 224 45 15 chr2 48743961 48744028 -204512555 - L2 LINE L2 -3 3310 3242 2264 112 0 0 chr2 48745307 48745612 -204510971 - AluSx SINE Alu -2 310 6 300 324 83 0 chr2 48745637 48745745 -204510838 - MIR SINE MIR -143 119 3 868 306 81 28 chr2 48745932 48746382 -204510201 + L2 LINE L2 2818 3296 -17 341 153 111 0 chr2 48746382 48746454 -204510129 + MADE1 DNA Mariner 1 80 0 868 306 81 28 chr2 48746454 48746474 -204510109 + L2 LINE L2 3296 3313 0 561 345 101 43 chr2 48746488 48746955 -204509628 - L3 LINE CR1 -1081 496 3 2405 103 0 0 chr2 48747383 48747693 -204508890 + AluSx SINE Alu 1 310 -2 245 308 225 16 chr2 48748879 48749061 -204507522 + MIR SINE MIR 33 252 -10 306 0 0 0 chr2 48749590 48749624 -204506959 + (CA)n Simple_repeat Simple_repeat 2 35 0 497 234 18 0 chr2 48749871 48749982 -204506601 + L2 LINE L2 3201 3313 0 1955 117 41 17 chr2 48750159 48750450 -204506133 + AluSx SINE Alu 1 298 -14 2094 121 4 0 chr2 48751108 48751389 -204505194 + AluSx SINE Alu 14 295 -17 1992 132 30 0 chr2 48751389 48751684 -204504899 + AluSx SINE Alu 1 304 -8 3370 177 69 29 chr2 48752239 48752512 -204504071 - Charlie1 DNA MER1_type 0 2761 2500 1829 148 0 11 chr2 48752512 48752783 -204503800 + AluJb SINE Alu 1 268 -44 309 26 0 0 chr2 48752790 48752828 -204503755 + (CA)n Simple_repeat Simple_repeat 1 38 0 3370 177 69 29 chr2 48752828 48753386 -204503197 - Charlie1 DNA MER1_type -266 2495 1888 1143 180 0 5 chr2 48753418 48753607 -204502976 - AluJo SINE Alu -124 188 1 5275 206 93 21 chr2 48753609 48755089 -204501494 - Charlie1 DNA MER1_type -1174 1587 1 2264 106 3 22 chr2 48755340 48755652 -204500931 + AluSx SINE Alu 1 306 -6 1957 115 0 0 chr2 48755932 48756192 -204500391 + AluSx SINE Alu 1 260 -52 200 278 139 28 chr2 48756289 48756433 -204500150 - L2 LINE L2 -239 3033 2874 457 274 125 80 chr2 48756669 48757093 -204499490 + LTR16A LTR ERVL 8 450 0 306 0 0 0 chr2 48757114 48757148 -204499435 + (CA)n Simple_repeat Simple_repeat 2 35 0 204 135 0 0 chr2 48757158 48757195 -204499388 + (TATG)n Simple_repeat Simple_repeat 2 38 0 299 281 151 14 chr2 48757755 48757894 -204498689 - MIR SINE MIR -81 181 24 690 263 117 43 chr2 48758031 48758423 -204498160 + LTR16C LTR ERVL 71 491 0 1476 166 12 37 chr2 48761031 48761357 -204495226 + MER33 DNA MER1_type 1 318 -6 274 293 178 35 chr2 48762876 48763050 -204493533 + MIR SINE MIR 32 230 -32 1201 302 23 21 chr2 48763178 48763738 -204492845 + L1MEc LINE L1 57 617 -5779 1907 259 80 20 chr2 48763743 48764658 -204491925 + L1MEc LINE L1 661 1630 -4766 277 173 19 0 chr2 48764669 48764721 -204491862 - Ricksha DNA DNA -26 2828 2776 * 11378 137 25 28 chr2 48764678 48764721 -204491862 + Ricksha_c DNA DNA 36 78 -3189 1758 134 12 102 chr2 48764721 48765064 -204491519 + AluSx SINE Alu 1 312 0 11378 137 25 28 chr2 48765064 48766033 -204490550 + Ricksha_c DNA DNA 78 1048 -2219 1921 159 0 19 chr2 48766033 48766348 -204490235 + AluJb SINE Alu 1 309 -3 2209 104 3 3 chr2 48766357 48766656 -204489927 + AluSq SINE Alu 1 299 -14 11378 137 25 28 chr2 48766656 48767691 -204488892 + Ricksha_c DNA DNA 1056 2046 -13 5911 237 41 31 chr2 48767693 48770281 -204486302 + L1MEc LINE L1 1624 4212 -2003 1656 175 0 82 chr2 48770285 48770598 -204485985 + MLT2D LTR ERVL 69 347 -67 1526 173 28 99 chr2 48770598 48770991 -204485592 + MLT1A1 LTR MaLR 1 365 0 1656 175 0 82 chr2 48770991 48771054 -204485529 + MLT2D LTR ERVL 347 414 0 2071 145 3 3 chr2 48771082 48771379 -204485204 + AluJo SINE Alu 7 303 -9 369 200 24 148 chr2 48771389 48771599 -204484984 + L1MEc LINE L1 4631 4814 -1401 1855 236 76 41 chr2 48771612 48772297 -204484286 - MER72 LTR ERV1 -10 712 4 2327 204 35 27 chr2 48772302 48773192 -204483391 + L1MEc LINE L1 4824 5724 -511 591 117 0 0 chr2 48773299 48773393 -204483190 + (CA)n Simple_repeat Simple_repeat 2 95 0 202 247 0 41 chr2 48774063 48774136 -204482447 + CT-rich Low_complexity Low_complexity 2 71 0 271 264 34 27 chr2 48774186 48774334 -204482249 + (TCTCTG)n Simple_repeat Simple_repeat 4 152 0 1680 150 21 33 chr2 48774849 48775183 -204481400 + MLT1A2 LTR MaLR 43 372 -2 311 231 162 26 chr2 48775805 48775922 -204480661 - MIR SINE MIR -50 212 80 251 354 141 10 chr2 48776002 48776200 -204480383 + L2 LINE L2 2866 3089 -183 1175 229 103 74 chr2 48776238 48776735 -204479848 + MLT1J LTR MaLR 1 511 0 326 183 33 117 chr2 48776737 48776857 -204479726 - MIR SINE MIR 0 262 153 456 326 61 7 chr2 48776904 48777051 -204479532 - L2 LINE L2 -18 3254 3100 1890 262 57 16 chr2 48777058 48777684 -204478899 - HsTC2c DNA Tc2 -2 727 82 1593 173 101 0 chr2 48777691 48777968 -204478615 + AluJb SINE Alu 1 305 -7 589 239 8 0 chr2 48778035 48778165 -204478418 + L1MB5 LINE L1 5979 6109 -65 280 154 66 55 chr2 48778186 48778277 -204478306 + L1MC1 LINE L1 6225 6316 -17 375 164 97 2 chr2 48778465 48778604 -204477979 + MER58A DNA MER1_type 37 212 -12 1425 215 109 36 chr2 48778758 48779200 -204477383 - L1MB8 LINE L1 -6 6172 5699 355 252 29 34 chr2 48779199 48779211 -204477372 - L1MEc LINE L1 -4130 2266 2255 * 1955 155 54 38 chr2 48779211 48779579 -204477004 - MLT1A2 LTR MaLR 0 374 1 355 252 29 34 chr2 48779579 48779804 -204476779 - L1MEc LINE L1 -4141 2255 2030 612 189 38 0 chr2 48779804 48779936 -204476647 + MER115 DNA AcHobo 557 693 0 479 273 22 65 chr2 48780011 48780212 -204476371 - L1ME4a LINE L1 -221 5900 5709 1971 144 0 29 chr2 48780212 48780518 -204476065 + AluSx SINE Alu 1 297 -15 479 273 22 65 chr2 48780518 48780624 -204475959 - L1ME4a LINE L1 -412 5709 5600 380 308 18 53 chr2 48780759 48780928 -204475655 - L1ME4a LINE L1 -733 5429 5267 425 171 0 0 chr2 48781354 48781424 -204475159 + AluJ/FLAM SINE Alu 21 90 -222 287 327 44 0 chr2 48781576 48781689 -204474894 + MIR SINE MIR 117 234 -28 201 217 22 0 chr2 48781814 48781860 -204474723 - MIR SINE MIR -114 148 102 263 307 209 6 chr2 48782306 48782469 -204474114 - MIR3 SINE MIR -11 197 2 582 235 141 0 chr2 48782874 48783023 -204473560 + MER5B DNA MER1_type 1 170 -8 334 300 16 45 chr2 48783510 48783650 -204472933 - MIR SINE MIR -65 143 61 492 87 0 14 chr2 48784188 48784257 -204472326 - AluSc SINE Alu -139 170 103 804 107 0 0 chr2 48784360 48784463 -204472120 - AluSp SINE Alu -210 103 1 1109 189 35 54 chr2 48784637 48784950 -204471633 + MLT1C LTR MaLR 1 307 -160 387 284 136 12 chr2 48785040 48785209 -204471374 - MLT1K LTR MaLR -359 229 40 334 355 58 21 chr2 48785376 48785618 -204470965 - L2 LINE L2 -212 3060 2810 827 227 144 34 chr2 48785861 48785978 -204470605 - MER5C DNA MER1_type 0 324 221 2062 120 3 27 chr2 48785978 48786297 -204470286 - AluJb SINE Alu 0 312 1 827 227 144 34 chr2 48786297 48786469 -204470114 - MER5C DNA MER1_type -103 221 2 364 246 93 8 chr2 48786619 48786737 -204469846 - MLT1J LTR MaLR -314 197 70 996 235 109 68 chr2 48786862 48787367 -204469216 - MLT1H LTR MaLR -11 613 14 1066 209 162 32 chr2 48787927 48788328 -204468255 + MLT1D LTR MaLR 1 453 -52 4390 159 15 37 chr2 48788342 48788457 -204468126 - L1MB4 LINE L1 -3 6177 6061 2112 133 6 19 chr2 48788457 48788773 -204467810 - AluSx SINE Alu 0 312 1 4390 159 15 37 chr2 48788773 48789565 -204467018 - L1MB4 LINE L1 -119 6061 5290 334 167 0 15 chr2 48789565 48789631 -204466952 + MLT1C LTR MaLR 402 466 -1 236 338 0 0 chr2 48789824 48789898 -204466685 - L2 LINE L2 -1512 1802 1729 299 255 153 10 chr2 48790077 48790175 -204466408 - MIR3 SINE MIR -8 200 89 258 319 56 14 chr2 48790514 48790658 -204465925 + MLT2E LTR ERVL 35 184 -444 243 308 0 13 chr2 48790832 48790910 -204465673 + LTR33A LTR ERVL 446 522 -1 262 285 73 19 chr2 48790961 48791088 -204465495 - MIR SINE MIR -74 188 4 331 301 117 18 chr2 48791878 48792041 -204464542 - MIR3 SINE MIR -27 181 3 245 336 52 0 chr2 48792503 48792619 -204463964 - MIR SINE MIR -59 149 28 215 293 24 49 chr2 48794900 48794982 -204461601 + L2 LINE L2 3232 3311 -2 188 162 0 27 chr2 48794993 48795030 -204461553 - L2 LINE L2 -226 3046 3011 2105 114 17 0 chr2 48796313 48796602 -204459981 - AluSx SINE Alu -18 294 1 638 164 4 118 chr2 48796707 48796944 -204459639 - Charlie5 DNA MER1_type -27 2585 2376 674 185 37 15 chr2 48796944 48797079 -204459504 - MLT1C LTR MaLR 0 467 330 2006 153 14 0 chr2 48797118 48797412 -204459171 + AluJo SINE Alu 1 298 -14 228 86 0 0 chr2 48797412 48797447 -204459136 + (CAAG)n Simple_repeat Simple_repeat 2 36 0 2313 112 129 15 chr2 48797481 48797893 -204458690 + MER4C LTR ERV1 6 464 -1 913 182 131 33 chr2 48797905 48798180 -204458403 - MLT1C LTR MaLR -154 313 12 1331 176 20 4 chr2 48798312 48798562 -204458021 - MER33 DNA MER1_type -70 254 1 2369 124 5 45 chr2 48798772 48799151 -204457432 + THE1B LTR MaLR 1 364 0 462 18 0 0 chr2 48800062 48800117 -204456466 + (CA)n Simple_repeat Simple_repeat 1 55 0 620 149 66 8 chr2 48800639 48800706 -204455877 + MER5B DNA MER1_type 51 113 -65 186 43 0 0 chr2 48800706 48800729 -204455854 + (TA)n Simple_repeat Simple_repeat 1 23 0 620 149 66 8 chr2 48800729 48800782 -204455801 + MER5B DNA MER1_type 113 178 0 193 378 0 0 chr2 48801774 48801848 -204454735 + MIR SINE MIR 68 141 -67 695 150 0 0 chr2 48802140 48802240 -204454343 + AluSq/x SINE Alu 36 135 -178 2162 129 0 0 chr2 48802240 48802527 -204454056 + AluSx SINE Alu 1 287 -25 248 342 9 27 chr2 48802987 48803042 -204453541 - L2 LINE L2 -30 3283 3229 1950 164 30 35 chr2 48803042 48803408 -204453175 + MLT1A1 LTR MaLR 1 364 -1 248 342 9 27 chr2 48803408 48803463 -204453120 - L2 LINE L2 -84 3229 3175 1410 149 37 0 chr2 48804218 48804432 -204452151 + AluSg/x SINE Alu 85 306 -6 278 206 183 52 chr2 48806271 48806523 -204450060 - LTR33 LTR ERVL -1 520 236 879 174 44 65 chr2 48806562 48806880 -204449703 + MLT1B LTR MaLR 1 390 0 522 271 28 0 chr2 48806880 48807056 -204449527 - LTR33 LTR ERVL -325 196 16 270 0 0 0 chr2 48807300 48807330 -204449253 + (A)n Simple_repeat Simple_repeat 1 30 0 945 122 0 0 chr2 48807330 48807453 -204449130 - AluSg/x SINE Alu -37 273 151 495 212 1 19 chr2 48807546 48807677 -204448906 + L1ME2 LINE L1 6043 6178 0 208 306 28 14 chr2 48807678 48807750 -204448833 + MIR SINE MIR 189 261 -1 332 290 0 9 chr2 48808226 48808333 -204448250 + MIR SINE MIR 31 136 -126 282 29 0 0 chr2 48808489 48808524 -204448059 + (T)n Simple_repeat Simple_repeat 1 35 0 209 250 40 26 chr2 48808993 48809069 -204447514 + MIR SINE MIR 61 137 -71 254 222 56 89 chr2 48809124 48809214 -204447369 + L2 LINE L2 3208 3294 -19 1500 122 66 0 chr2 48809223 48809436 -204447147 - AluSg/x SINE Alu -5 305 79 1089 154 0 2 chr2 48810522 48810983 -204445600 + (AGCTG)n Simple_repeat Simple_repeat 1 640 0 287 314 73 6 chr2 48811712 48811867 -204444716 + MIR SINE MIR 23 190 -71 336 332 101 15 chr2 48812774 48812973 -204443610 + L2 LINE L2 3077 3292 -21 439 277 71 58 chr2 48814261 48814482 -204442101 - MIR SINE MIR -37 225 4 444 274 77 6 chr2 48814579 48814747 -204441836 + MIR SINE MIR 67 246 -16 255 250 0 0 chr2 48815233 48815285 -204441298 - MIR SINE MIR -32 230 179 183 203 270 14 chr2 48815644 48815718 -204440865 + MIR SINE MIR 38 130 -132 21 0 0 0 chr2 48816037 48816058 -204440525 + AT_rich Low_complexity Low_complexity 1 21 0 256 192 58 0 chr2 48816216 48816268 -204440315 - MIR3 SINE MIR -45 163 109 1131 161 117 16 chr2 48816295 48816543 -204440040 - ORSL DNA AcHobo 0 275 3 640 172 90 0 chr2 48816766 48816888 -204439695 - FLAM_A SINE Alu 0 133 1 1712 175 11 0 chr2 48818325 48818599 -204437984 + AluJb SINE Alu 11 287 -25 433 263 38 38 chr2 48818735 48818827 -204437756 + L1M4 LINE L1 4064 4158 -1988 2174 148 0 0 chr2 48818827 48819137 -204437446 + AluSx SINE Alu 1 310 -2 433 263 38 38 chr2 48819137 48819177 -204437406 + L1M4 LINE L1 4157 4196 -1950 268 164 30 15 chr2 48819177 48819244 -204437339 + GA-rich Low_complexity Low_complexity 2 69 0 1577 201 29 35 chr2 48819248 48819562 -204437021 + AluJb SINE Alu 1 312 0 325 162 14 14 chr2 48819631 48819705 -204436878 + GA-rich Low_complexity Low_complexity 2 75 0 383 317 88 39 chr2 48819716 48819921 -204436662 + L1M4 LINE L1 4138 4352 -1794 308 267 146 44 chr2 48820358 48820542 -204436041 + MIR SINE MIR 10 212 -50 695 213 15 116 chr2 48820965 48821233 -204435350 - MIR SINE MIR 0 262 22 241 250 53 13 chr2 48821646 48821722 -204434861 + MIR SINE MIR 76 154 -108 244 282 47 0 chr2 48822087 48822172 -204434411 - MIR SINE MIR -60 202 114 651 198 16 96 chr2 48822641 48822828 -204433755 - MER5B DNA MER1_type -3 175 4 184 242 30 45 chr2 48823417 48823483 -204433100 - L2 LINE L2 0 3272 3208 895 174 32 0 chr2 48823612 48823767 -204432816 - AluJ SINE Alu -30 282 123 304 157 24 121 chr2 48823768 48823851 -204432732 - L1MCa LINE L1 -4363 2063 1989 820 148 8 0 chr2 48823851 48823973 -204432610 - AluJ SINE Alu -189 123 1 320 265 128 0 chr2 48824442 48824544 -204432039 - L2 LINE L2 -2 3311 3197 253 337 0 0 chr2 48824597 48824686 -204431897 - L1ME4a LINE L1 -60 6061 5973 332 290 100 0 chr2 48824701 48824801 -204431782 - L1ME4a LINE L1 -248 5873 5764 2153 118 3 0 chr2 48824929 48825241 -204431342 + AluSx SINE Alu 1 313 0 1930 146 11 40 chr2 48826074 48826424 -204430159 - MER2 DNA MER2_type 0 345 6 304 170 75 0 chr2 48826470 48826523 -204430060 + MIR SINE MIR 87 143 -65 328 260 71 45 chr2 48826738 48826892 -204429691 - MIR SINE MIR -26 236 79 298 177 260 31 chr2 48826904 48827000 -204429583 + MER63 DNA MER1_type 1 744 -92 189 247 124 67 chr2 48827152 48827241 -204429342 - MER5A DNA MER1_type -40 149 56 193 269 15 30 chr2 48827168 48827235 -204429348 + MER5B DNA MER1_type 63 128 -50 341 184 0 71 chr2 48827484 48827582 -204429001 - HsTC2 DNA Tc2 -5 1893 1803 235 102 61 0 chr2 48827562 48827611 -204428972 - HsTC2 DNA Tc2 -1845 53 2 * 397 249 160 25 chr2 48827773 48827960 -204428623 - MIR SINE MIR -3 259 45 1856 146 54 0 chr2 48828022 48828302 -204428281 + AluJb SINE Alu 1 295 -17 324 0 0 0 chr2 48829070 48829106 -204427477 + (TG)n Simple_repeat Simple_repeat 2 37 0 1505 40 0 6 chr2 48829340 48829514 -204427069 + AluY SINE Alu 96 268 -43 237 143 77 154 chr2 48829514 48829542 -204427041 + Charlie4a DNA MER1_type 246 275 -1686 2181 133 3 0 chr2 48829542 48829850 -204426733 + AluSx SINE Alu 1 309 -3 237 143 77 154 chr2 48829850 48829912 -204426671 + Charlie4a DNA MER1_type 275 329 -179 576 179 45 0 chr2 48829939 48830073 -204426510 + Charlie4a DNA MER1_type 314 453 -55 1991 110 3 43 chr2 48830228 48830528 -204426055 + AluSx SINE Alu 9 296 -16 1077 134 0 50 chr2 48830528 48830707 -204425876 + AluSg/x SINE Alu 134 303 -9 1707 201 3 0 chr2 48830923 48831243 -204425340 - AluJb SINE Alu 0 321 1 2623 65 0 0 chr2 48831430 48831739 -204424844 + AluY SINE Alu 1 309 -2 334 297 65 87 chr2 48831878 48832063 -204424520 - MER5A DNA MER1_type 0 189 9 827 128 34 74 chr2 48833132 48833281 -204423302 - FLAM_C SINE Alu 0 143 1 3520 142 89 19 chr2 48833291 48833941 -204422642 - L1MD1 LINE L1 0 6242 5547 2274 165 66 109 chr2 48833942 48834281 -204422302 - L1MDa LINE L1 -4241 2299 2008 2353 107 0 0 chr2 48834281 48834589 -204421994 + AluSg1 SINE Alu 1 308 -1 2274 165 66 109 chr2 48834589 48834981 -204421602 - L1MDa LINE L1 -4532 2008 1600 445 326 95 0 chr2 48836088 48836278 -204420305 - MIR SINE MIR -28 234 27 800 212 16 7 chr2 48837516 48837702 -204418881 - MLT1L LTR MaLR -5 610 323 702 246 32 52 chr2 48837759 48838007 -204418576 - MLT1L LTR MaLR -331 284 42 322 199 20 88 chr2 48838023 48838142 -204418441 - MIR SINE MIR -52 156 44 190 252 148 52 chr2 48838355 48838510 -204418073 + L2 LINE L2 1741 1910 -1404 308 247 216 0 chr2 48838920 48839017 -204417566 + MIR SINE MIR 30 147 -115 1522 189 31 20 chr2 48839022 48839371 -204417212 - MLT1A1 LTR MaLR -12 353 1 329 296 28 0 chr2 48839372 48839480 -204417103 + MIR SINE MIR 152 262 0 358 305 108 0 chr2 48839581 48839748 -204416835 - MIR SINE MIR -76 186 2 203 178 0 22 chr2 48840791 48840836 -204415747 + GA-rich Low_complexity Low_complexity 1 44 0 2339 100 0 0 chr2 48841728 48842027 -204414556 - AluSq SINE Alu -14 299 1 463 298 82 6 chr2 48842060 48842218 -204414365 + MIR3 SINE MIR 33 202 -6 594 133 0 0 chr2 48842544 48842627 -204413956 + AluJ/FLAM SINE Alu 2 84 -228 455 358 70 14 chr2 48842631 48842916 -204413667 - L2 LINE L2 -168 3104 2804 823 156 87 12 chr2 48843196 48843369 -204413214 + MER20 DNA MER1_type 34 219 0 247 333 39 0 chr2 48843524 48843626 -204412957 - MIR SINE MIR -85 123 18 565 258 137 0 chr2 48844304 48844494 -204412089 + MIR SINE MIR 22 237 -25 222 37 0 0 chr2 48844504 48844531 -204412052 + (TTA)n Simple_repeat Simple_repeat 3 29 0 287 240 106 19 chr2 48846377 48846481 -204410102 + L2 LINE L2 2941 3053 -219 522 279 93 0 chr2 48846579 48846751 -204409832 + MLT1I LTR MaLR 7 194 -215 459 246 8 23 chr2 48846806 48846936 -204409647 + MLT1I LTR MaLR 282 409 0 2080 163 75 43 chr2 48847096 48847533 -204409050 - MSTB2 LTR MaLR -6 451 1 299 100 0 0 chr2 48847733 48847773 -204408810 - Alu SINE Alu -261 41 2 241 295 0 0 chr2 48848270 48848331 -204408252 + (TG)n Simple_repeat Simple_repeat 2 62 0 468 302 176 17 chr2 48848876 48849177 -204407406 + L2 LINE L2 2924 3272 0 481 286 61 90 chr2 48849592 48849970 -204406613 - L1ME4a LINE L1 -179 5942 5576 1872 154 34 0 chr2 48849981 48850279 -204406304 + AluSx SINE Alu 1 308 -4 1129 170 39 12 chr2 48850279 48850678 -204405905 - LTR54 LTR ERV1 -8 502 1 523 288 171 19 chr2 48851089 48851294 -204405289 - MIR SINE MIR -7 255 20 767 95 26 14 chr2 48851644 48851923 -204404660 + (CA)n Simple_repeat Simple_repeat 1 282 0 1286 269 85 29 chr2 48852029 48852755 -204403828 + L1ME3A LINE L1 4342 5108 -1038 480 147 0 0 chr2 48852765 48852833 -204403750 + AluS SINE Alu 1 68 -245 543 221 7 15 chr2 48852836 48852972 -204403611 + L1MC5 LINE L1 7777 7911 -50 850 283 125 19 chr2 48853074 48853611 -204402972 + L1ME3A LINE L1 5258 5851 -319 301 240 35 157 chr2 48853827 48853973 -204402610 + L1ME3A LINE L1 5963 6125 -45 330 26 0 0 chr2 48853973 48854012 -204402571 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1893 163 0 0 chr2 48854014 48854296 -204402287 - AluJo SINE Alu -30 282 1 301 240 35 157 chr2 48854296 48854375 -204402208 + L1ME3A LINE L1 6126 6163 -7 192 317 130 8 chr2 48854662 48854785 -204401798 + L2 LINE L2 3134 3271 -1 208 276 61 61 chr2 48855046 48855144 -204401439 + MER91C DNA MER1_type 16 113 -27 192 250 20 27 chr2 48855343 48855491 -204401092 + CT-rich Low_complexity Low_complexity 4 150 0 202 222 0 19 chr2 48856051 48856105 -204400478 + GA-rich Low_complexity Low_complexity 3 55 0 563 192 32 24 chr2 48856647 48856772 -204399811 - MIR SINE MIR -101 161 36 398 283 28 45 chr2 48857132 48857309 -204399274 + MIR SINE MIR 47 220 -42 528 270 45 72 chr2 48857309 48857531 -204399052 - MIR SINE MIR 0 262 47 200 308 0 15 chr2 48858216 48858281 -204398302 - L3 LINE CR1 0 1577 1514 509 271 48 48 chr2 48858299 48858544 -204398039 - MIR SINE MIR -6 256 9 273 320 148 44 chr2 48858534 48858784 -204397799 - L3 LINE CR1 -57 1520 1245 * 312 311 141 0 chr2 48858822 48858999 -204397584 + MIR SINE MIR 61 262 0 216 267 67 0 chr2 48859015 48859075 -204397508 + MIR SINE MIR 101 164 -98 2347 94 0 25 chr2 48859379 48859698 -204396885 + AluSx SINE Alu 1 311 -1 257 89 44 0 chr2 48860346 48860391 -204396192 + Alu SINE Alu 253 299 -3 426 289 21 58 chr2 48861267 48861457 -204395126 - MIR SINE MIR -33 229 47 233 240 154 58 chr2 48862284 48862388 -204394195 + MIR SINE MIR 32 145 -63 229 319 7 101 chr2 48862665 48862763 -204393820 - L2 LINE L2 -195 3077 2994 2052 107 10 24 chr2 48862763 48863054 -204393529 + AluSq SINE Alu 14 300 -13 229 319 7 101 chr2 48863054 48863093 -204393490 - L2 LINE L2 -278 2994 2953 13584 37 1 1 chr2 48863172 48864882 -204391701 - L1P LINE L1 -1284 4862 3153 603 286 104 5 chr2 48865484 48865676 -204390907 + MIR SINE MIR 14 224 -38 251 325 68 43 chr2 48865725 48865842 -204390741 + L3b LINE CR1 1332 1451 -132 588 209 320 4 chr2 48866144 48866378 -204390205 - MER5C DNA MER1_type 0 324 17 1783 135 15 74 chr2 48866618 48866943 -204389640 - AluJo SINE Alu -6 306 1 182 351 135 0 chr2 48867149 48867260 -204389323 - MIR SINE MIR -9 253 128 224 253 46 35 chr2 48867320 48867407 -204389176 + MER5A DNA MER1_type 7 94 -95 341 264 171 20 chr2 48867568 48867638 -204388945 + L1ME4a LINE L1 5757 5815 -306 2169 129 0 0 chr2 48867638 48867932 -204388651 + AluSx SINE Alu 1 294 -18 341 264 171 20 chr2 48867932 48868107 -204388476 + L1ME4a LINE L1 5815 6039 -82 521 292 209 12 chr2 48868431 48868770 -204387813 + L2 LINE L2 2866 3271 -1 294 306 98 17 chr2 48870321 48870494 -204386089 + MIR SINE MIR 21 207 -55 398 337 130 42 chr2 48871241 48871650 -204384933 - L2 LINE L2 -1 3271 2827 238 310 241 0 chr2 48871710 48871826 -204384757 - L2 LINE L2 -608 2706 2563 357 136 0 0 chr2 48872102 48872168 -204384415 + (GGGA)n Simple_repeat Simple_repeat 4 69 0 272 239 82 45 chr2 48872182 48872316 -204384267 - MLT1K LTR MaLR -71 517 379 812 203 0 0 chr2 48872776 48872909 -204383674 - FLAM_C SINE Alu -10 133 1 659 175 0 80 chr2 48873870 48873903 -204382680 + AluJo SINE Alu 11 45 -267 2447 84 3 0 chr2 48873903 48874199 -204382384 + AluSg SINE Alu 1 297 -13 659 175 0 80 chr2 48874199 48874302 -204382281 + AluJo SINE Alu 45 136 -176 427 107 0 0 chr2 48874445 48874501 -204382082 + Alu SINE Alu 2 57 -261 512 205 0 118 chr2 48875545 48875670 -204380913 + MER110A LTR ERV1 70 165 -303 1982 134 0 49 chr2 48875670 48875977 -204380606 - AluSx SINE Alu -20 292 1 512 205 0 118 chr2 48875977 48876046 -204380537 + MER110A LTR ERV1 165 241 -227 265 143 0 0 chr2 48876058 48876107 -204380476 + Alu SINE Alu 252 300 -1 2586 74 0 0 chr2 48876193 48876502 -204380081 - AluSc SINE Alu 0 309 1 297 79 0 0 chr2 48876684 48876722 -204379861 + FRAM SINE Alu 63 100 -66 420 178 0 0 chr2 48876722 48876795 -204379788 + MER110A LTR ERV1 281 353 -115 479 232 25 8 chr2 48876834 48876982 -204379601 + MER110A LTR ERV1 324 470 0 1858 166 0 3 chr2 48877216 48877523 -204379060 + AluJo SINE Alu 6 311 -1 2053 132 14 3 chr2 48878263 48878559 -204378024 - AluJb SINE Alu -13 299 1 264 111 0 0 chr2 48878849 48878885 -204377698 + AluJ/FRAM SINE Alu 217 252 -50 363 203 16 0 chr2 48878895 48878959 -204377624 - MLT1D LTR MaLR -440 65 1 589 266 148 70 chr2 48878959 48879250 -204377333 - L1MEd LINE L1 -2348 3781 3514 2434 89 0 0 chr2 48879250 48879552 -204377031 + AluSq SINE Alu 1 302 -11 589 266 148 70 chr2 48879552 48879935 -204376648 - L1MEd LINE L1 -2615 3514 3072 1028 273 16 22 chr2 48879938 48880257 -204376326 - MLT1I LTR MaLR -2 407 91 456 247 50 55 chr2 48880314 48880533 -204376050 - L1MEd LINE L1 -3054 3075 2858 1728 170 11 11 chr2 48880536 48880848 -204375735 - AluJo SINE Alu 0 312 1 1833 156 0 4 chr2 48880859 48881153 -204375430 - AluSx SINE Alu 0 309 17 1774 186 24 0 chr2 48881269 48881560 -204375023 - AluJb SINE Alu -14 298 1 291 151 0 0 chr2 48881951 48882004 -204374579 + MLT1E3 LTR MaLR 572 624 0 2133 143 7 0 chr2 48882005 48882312 -204374271 + AluJb SINE Alu 1 309 -3 691 302 98 32 chr2 48882339 48882537 -204374046 - L1MEd LINE L1 -4704 1606 1423 2428 72 0 16 chr2 48882537 48882841 -204373742 + AluY SINE Alu 2 300 -11 691 302 98 32 chr2 48882841 48883632 -204372951 - L1MEd LINE L1 -4887 1423 534 224 288 85 90 chr2 48883707 48883919 -204372664 + L2 LINE L2 3039 3249 -23 189 0 0 0 chr2 48884626 48884647 -204371936 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 2212 90 0 0 chr2 48884655 48884921 -204371662 - AluSq SINE Alu -47 266 1 739 181 0 30 chr2 48884945 48885078 -204371505 + FLAM_A SINE Alu 4 132 -1 1886 154 3 3 chr2 48885281 48885574 -204371009 + AluJb SINE Alu 13 305 -7 23 54 0 0 chr2 48885679 48885716 -204370867 + AT_rich Low_complexity Low_complexity 1 37 0 469 335 23 90 chr2 48885762 48885947 -204370636 + L1MEd LINE L1 81 240 -5879 1772 144 3 88 chr2 48885947 48886160 -204370423 - AluJo SINE Alu 0 312 137 2376 84 0 10 chr2 48886160 48886459 -204370124 + AluSq SINE Alu 1 296 -17 1772 144 3 88 chr2 48886459 48886586 -204369997 - AluJo SINE Alu -175 137 1 469 335 23 90 chr2 48886586 48886701 -204369882 + L1MEd LINE L1 240 361 -5758 3110 207 86 62 chr2 48886701 48887527 -204369056 + MER21B LTR ERV1 1 846 -17 824 304 60 17 chr2 48887573 48887925 -204368658 + L1MEd LINE L1 375 741 -5378 1699 97 7 77 chr2 48888250 48888550 -204368033 + MER1B DNA MER1_type 61 339 0 1417 233 82 40 chr2 48888755 48889282 -204367301 - L1M4 LINE L1 -1717 4429 3881 23 54 0 0 chr2 48889509 48889546 -204367037 + AT_rich Low_complexity Low_complexity 1 37 0 2158 127 0 3 chr2 48889565 48889856 -204366727 + AluSx SINE Alu 1 290 -22 864 258 9 0 chr2 48890063 48890276 -204366307 - Charlie2 DNA MER1_type -2200 582 368 2154 118 7 0 chr2 48890647 48890943 -204365640 - AluSq SINE Alu -15 298 1 250 169 17 17 chr2 48891657 48891716 -204364867 - MLT1J LTR MaLR -7 504 446 1971 286 93 17 chr2 48891732 48892492 -204364091 - L2 LINE L2 -643 2671 1854 302 212 0 0 chr2 48892494 48892560 -204364023 - L2 LINE L2 -1633 1681 1616 329 242 77 33 chr2 48892651 48892742 -204363841 + L2 LINE L2 3178 3272 0 220 184 0 0 chr2 48892750 48892788 -204363795 + (TGGA)n Simple_repeat Simple_repeat 2 39 0 794 106 23 30 chr2 48892900 48893032 -204363551 + FLAM_C SINE Alu 3 133 0 2125 58 18 7 chr2 48893263 48893572 -204363011 + AluSg SINE Alu 2 313 0 24 0 0 0 chr2 48894356 48894380 -204362203 + GC_rich Low_complexity Low_complexity 1 24 0 513 296 167 39 chr2 48894853 48895367 -204361216 + L2 LINE L2 2377 2956 -358 260 266 16 0 chr2 48896722 48896786 -204359797 + CT-rich Low_complexity Low_complexity 2 66 0 841 161 0 0 chr2 48896789 48896907 -204359676 - AluJb SINE Alu -194 118 1 227 323 188 0 chr2 48897360 48897456 -204359127 - L2 LINE L2 -38 3234 3121 196 310 26 52 chr2 48897545 48897661 -204358922 - L2 LINE L2 -168 3104 2992 1684 119 16 16 chr2 48897830 48898074 -204358509 - AluSx SINE Alu -23 289 46 2441 91 3 0 chr2 48898213 48898520 -204358063 + AluSx SINE Alu 1 308 -4 1685 150 70 31 chr2 48898597 48898883 -204357700 - AluJo SINE Alu -15 297 1 235 288 0 0 chr2 48898884 48898950 -204357633 - MARNA DNA Mariner -55 531 466 201 314 151 25 chr2 48899918 48900077 -204356506 + L2 LINE L2 2912 3090 -182 180 200 0 0 chr2 48900873 48900923 -204355660 + (CA)n Simple_repeat Simple_repeat 1 50 0 1880 174 0 10 chr2 48901077 48901376 -204355207 + AluJb SINE Alu 1 296 -16 1916 168 3 40 chr2 48901946 48902268 -204354315 + AluJb SINE Alu 3 312 0 959 196 0 0 chr2 48902648 48902806 -204353777 + AluJb SINE Alu 147 304 -8 1931 141 29 35 chr2 48902853 48903165 -204353418 + AluJb SINE Alu 1 310 -2 219 125 0 0 chr2 48903905 48903945 -204352638 + (T)n Simple_repeat Simple_repeat 1 40 0 2845 54 14 3 chr2 48904420 48904771 -204351812 - THE1A LTR MaLR 0 355 1 10675 74 52 9 chr2 48904771 48906287 -204350296 - THE1A-int LTR MaLR 0 1580 1 2877 54 11 0 chr2 48906287 48906638 -204349945 - THE1A LTR MaLR 0 355 1 225 245 0 0 chr2 48908560 48908609 -204347974 + MIR SINE MIR 106 154 -108 551 250 152 29 chr2 48908636 48908840 -204347743 + MIR SINE MIR 20 248 -14 183 129 0 0 chr2 48908989 48909020 -204347563 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 1084 283 52 48 chr2 48909251 48909506 -204347077 + HAL1 LINE L1 617 870 -1637 2273 97 23 0 chr2 48909506 48909806 -204346777 - AluSg SINE Alu -3 307 1 1084 283 52 48 chr2 48909806 48910190 -204346393 + HAL1 LINE L1 870 1258 -1249 921 228 34 17 chr2 48910495 48910728 -204345855 + MIR SINE MIR 5 241 -21 335 285 39 22 chr2 48910759 48910938 -204345645 - MLT1K LTR MaLR -368 220 39 317 322 85 8 chr2 48912119 48912237 -204344346 - L1ME LINE L1 -483 5638 5512 211 239 0 45 chr2 48912348 48912415 -204344168 + (TTTA)n Simple_repeat Simple_repeat 3 66 0 937 144 0 0 chr2 48912510 48912642 -204343941 - FLAM_C SINE Alu 0 133 2 640 43 22 0 chr2 48912763 48912855 -204343728 + (TCTA)n Simple_repeat Simple_repeat 3 96 0 3164 218 85 33 chr2 48912915 48914132 -204342451 + L1MDa LINE L1 1 1368 -5162 2148 114 10 3 chr2 48914132 48914438 -204342145 + AluSg SINE Alu 1 308 -2 3164 218 85 33 chr2 48914438 48914695 -204341888 + L1MDa LINE L1 1368 1610 -4920 479 292 43 6 chr2 48914797 48914958 -204341625 + MIR SINE MIR 52 218 -44 352 258 128 41 chr2 48915820 48915971 -204340612 + MIR SINE MIR 18 185 -63 272 232 66 12 chr2 48916256 48916369 -204340214 + MIR3 SINE MIR 84 179 -29 2501 75 0 7 chr2 48916409 48916714 -204339869 + AluSq SINE Alu 1 303 -10 204 40 0 0 chr2 48917816 48917841 -204338742 + (CTG)n Simple_repeat Simple_repeat 2 26 0 714 209 76 6 chr2 48920229 48920401 -204336182 + L1MC4 LINE L1 7490 7673 -369 256 146 21 0 chr2 48920454 48920502 -204336081 + L1MC4 LINE L1 7994 8042 0 482 225 244 0 chr2 48921002 48921162 -204335421 + MIR SINE MIR 64 262 0 383 306 107 29 chr2 48921136 48921342 -204335241 - MIR SINE MIR 0 262 41 * 771 257 191 0 chr2 48923926 48924136 -204332447 - MIR SINE MIR 0 262 13 181 157 59 78 chr2 48924160 48924211 -204332372 - L2 LINE L2 -84 3188 3139 2000 155 10 0 chr2 48924270 48924579 -204332004 - AluJb SINE Alu 0 312 1 354 263 0 21 chr2 48924593 48924688 -204331895 - MIR SINE MIR -74 188 96 771 199 0 0 chr2 48925752 48925888 -204330695 - AluJo SINE Alu -7 305 170 702 144 50 93 chr2 48925897 48926036 -204330547 + AluJo SINE Alu 86 218 -94 1033 175 0 6 chr2 48926057 48926217 -204330366 - AluJo SINE Alu -152 160 2 21 0 0 0 chr2 48926503 48926524 -204330059 + AT_rich Low_complexity Low_complexity 1 21 0 1310 171 38 54 chr2 48926545 48926640 -204329943 - AluJo SINE Alu -77 235 140 2245 88 11 0 chr2 48926640 48926925 -204329658 - AluSc SINE Alu -21 288 1 1310 171 38 54 chr2 48926925 48927068 -204329515 - AluJo SINE Alu -172 140 1 1659 189 10 16 chr2 48927786 48928099 -204328484 - AluJo SINE Alu -1 311 1 219 239 70 0 chr2 48928189 48928260 -204328323 + GA-rich Low_complexity Low_complexity 1 76 0 351 234 255 0 chr2 48928586 48928731 -204327852 + MIR SINE MIR 74 255 -7 871 175 129 66 chr2 48928767 48928812 -204327771 - MER5C DNA MER1_type -16 308 267 1712 166 14 14 chr2 48928812 48929102 -204327481 + AluSx SINE Alu 1 290 -22 871 175 129 66 chr2 48929102 48929342 -204327241 - MER5C DNA MER1_type -57 267 5 302 286 51 0 chr2 48929713 48929811 -204326772 - L1MC/D LINE L1 -2185 5623 5521 874 167 0 0 chr2 48930008 48930140 -204326443 - FLAM_A SINE Alu -1 132 1 2022 128 14 0 chr2 48930614 48930910 -204325673 - AluSq SINE Alu -9 304 5 704 212 89 34 chr2 48931109 48931288 -204325295 + AluJo SINE Alu 122 310 -2 1316 146 43 84 chr2 48932034 48932357 -204324226 + MER33 DNA MER1_type 14 323 -1 416 275 119 6 chr2 48932620 48932780 -204323803 + MER5A DNA MER1_type 4 181 -8 210 118 0 0 chr2 48932897 48932931 -204323652 + (TTCC)n Simple_repeat Simple_repeat 1 34 0 760 161 40 0 chr2 48932967 48933091 -204323492 - FLAM_C SINE Alu -3 130 2 267 344 52 19 chr2 48933122 48933276 -204323307 - L2 LINE L2 0 3272 3114 230 341 37 0 chr2 48933598 48933680 -204322903 + MIR3 SINE MIR 76 160 -48 52 30 0 0 chr2 48933719 48933785 -204322798 + AT_rich Low_complexity Low_complexity 1 66 0 1656 175 3 3 chr2 48933863 48934148 -204322435 + AluJb SINE Alu 13 297 -15 1930 144 0 3 chr2 48934544 48934836 -204321747 - AluJo SINE Alu -21 291 1 774 171 0 27 chr2 48935197 48935343 -204321240 - FLAM_C SINE Alu 0 143 2 187 343 30 0 chr2 48935599 48935666 -204320917 - MIR SINE MIR -113 149 81 2360 69 3 10 chr2 48935948 48936252 -204320331 - AluSx SINE Alu -10 302 1 184 278 89 67 chr2 48936836 48937016 -204319567 - L2 LINE L2 -164 3108 2925 335 293 128 0 chr2 48937711 48937844 -204318739 + MER69A DNA AcHobo 28 177 0 385 236 27 88 chr2 48938566 48938714 -204317869 + MIR3 SINE MIR 33 171 -37 225 232 98 62 chr2 48938853 48938965 -204317618 - L2 LINE L2 -7 3265 3150 386 213 134 31 chr2 48939304 48939431 -204317152 - MIR SINE MIR -90 172 33 350 299 61 14 chr2 48940343 48940490 -204316093 - MIR SINE MIR -70 192 39 300 277 46 28 chr2 48940510 48940655 -204315928 - MIR SINE MIR -15 193 42 2204 78 0 3 chr2 48942676 48943000 -204313583 + AluY SINE Alu 1 323 0 1970 109 20 33 chr2 48943004 48943306 -204313277 + AluSx SINE Alu 1 298 -14 248 227 14 128 chr2 48944983 48945124 -204311459 - MLT1K LTR MaLR -16 572 448 333 261 206 30 chr2 48945214 48945413 -204311170 - MLT1K LTR MaLR -330 258 25 184 308 42 58 chr2 48945413 48945533 -204311050 - MIR3 SINE MIR -90 118 1 2000 130 7 3 chr2 48946945 48947244 -204309339 - AluSx SINE Alu -12 300 1 2142 102 7 0 chr2 48947336 48947630 -204308953 - AluSp SINE Alu -17 296 1 231 292 21 10 chr2 48947638 48947734 -204308849 - MIR SINE MIR -46 216 120 657 225 120 35 chr2 48947743 48948042 -204308541 - L1ME4a LINE L1 -118 6003 5660 828 131 31 15 chr2 48948042 48948172 -204308411 - FLAM_C SINE Alu 0 133 2 657 225 120 35 chr2 48948172 48948272 -204308311 - L1ME4a LINE L1 -461 5660 5570 2343 82 0 0 chr2 48948312 48948604 -204307979 + AluSx SINE Alu 1 292 -20 3246 147 3 60 chr2 48948607 48949205 -204307378 - L1MB2 LINE L1 -14 6157 5594 315 271 21 0 chr2 48950127 48950223 -204306360 - L1ME2 LINE L1 -10 6154 6057 245 191 0 0 chr2 48950225 48950267 -204306316 - MER3 DNA MER1_type -160 49 8 309 212 95 85 chr2 48950268 48950317 -204306266 - L1ME2 LINE L1 -153 6011 5964 890 122 15 0 chr2 48950317 48950448 -204306135 - FLAM_C SINE Alu 0 133 1 309 212 95 85 chr2 48950448 48950587 -204305996 - L1ME2 LINE L1 -200 5964 5821 2056 108 6 13 chr2 48950603 48950917 -204305666 + AluSq SINE Alu 1 312 -1 1617 154 0 69 chr2 48950926 48951244 -204305339 + AluJo SINE Alu 6 301 -11 311 254 22 39 chr2 48951605 48951683 -204304900 + (TA)n Simple_repeat Simple_repeat 2 80 -99 2082 122 0 10 chr2 48951683 48951986 -204304597 + AluSx SINE Alu 1 300 -12 1889 150 3 7 chr2 48951989 48952289 -204304294 + AluSx SINE Alu 1 299 -13 311 254 22 39 chr2 48952289 48952387 -204304196 + (TA)n Simple_repeat Simple_repeat 82 179 0 638 332 48 20 chr2 48952387 48952637 -204303946 - MIR SINE MIR -4 258 2 921 89 0 44 chr2 48952939 48953074 -204303509 + FLAM_C SINE Alu 1 129 -4 208 239 204 18 chr2 48953871 48953984 -204302599 - MIR SINE MIR -119 143 10 473 153 0 41 chr2 48955731 48955829 -204300754 - L1MB2 LINE L1 -2 6169 6076 345 307 205 16 chr2 48955855 48955982 -204300601 - MLT1K LTR MaLR -244 344 194 250 311 126 13 chr2 48956154 48956305 -204300278 - L2 LINE L2 -24 3289 3122 708 286 59 5 chr2 48956702 48956905 -204299678 - LTR36-int LTR ERV1 -2723 1562 1349 787 297 27 23 chr2 48957139 48957398 -204299185 - LTR36-int LTR ERV1 -1412 374 115 3275 136 36 47 chr2 48957463 48958081 -204298502 - LTR36 LTR ERV1 0 611 1 277 208 47 66 chr2 48958540 48958646 -204297937 - MER91B DNA MER1_type -8 182 79 209 95 0 24 chr2 48959056 48959098 -204297485 + (TTTTTA)n Simple_repeat Simple_repeat 6 46 0 2017 113 26 10 chr2 48959101 48959403 -204297180 - AluSq SINE Alu -6 307 1 653 330 19 5 chr2 48959503 48959718 -204296865 - MIR SINE MIR -8 254 37 1108 167 22 50 chr2 48959988 48960210 -204296373 - MER20 DNA MER1_type -3 216 1 294 135 58 0 chr2 48960965 48961017 -204295566 + L2 LINE L2 3217 3271 -1 734 177 0 0 chr2 48961131 48961244 -204295339 - FLAM_C SINE Alu -17 116 4 307 256 189 0 chr2 48961257 48961347 -204295236 + MIR SINE MIR 86 192 -70 479 292 124 0 chr2 48961618 48961796 -204294787 + MIR SINE MIR 12 211 -51 922 158 0 0 chr2 48961819 48961952 -204294631 + FLAM_C SINE Alu 1 133 0 1745 217 69 89 chr2 48963546 48963583 -204293000 - MER21B LTR ERV1 -1 862 826 1766 175 30 0 chr2 48963583 48963886 -204292697 - AluJb SINE Alu 0 312 1 1745 217 69 89 chr2 48963886 48964497 -204292086 - MER21B LTR ERV1 -37 826 227 237 139 0 0 chr2 48964492 48964528 -204292055 + MER58 DNA MER1_type 2383 2418 -2 * 308 324 58 40 chr2 48964529 48964702 -204291881 - L1ME4a LINE L1 -97 6024 5849 1775 173 0 3 chr2 48965465 48965766 -204290817 + AluJo SINE Alu 1 300 -12 552 216 58 28 chr2 48965821 48966020 -204290563 + MIR SINE MIR 1 206 -56 1745 133 17 30 chr2 48966072 48966372 -204290211 + AluJo SINE Alu 17 312 0 554 202 133 46 chr2 48967029 48967202 -204289381 + MER58A DNA MER1_type 37 224 0 330 296 122 41 chr2 48967430 48967602 -204288981 - MIR SINE MIR -75 187 2 236 309 66 52 chr2 48967749 48967885 -204288698 + MIR SINE MIR 81 218 -44 214 224 103 0 chr2 48968118 48968176 -204288407 - MIR SINE MIR -117 145 82 370 194 153 0 chr2 48968935 48969033 -204287550 - MIR SINE MIR -87 175 63 985 191 27 53 chr2 48969247 48969472 -204287111 - MER20 DNA MER1_type 0 219 1 363 23 0 0 chr2 48971184 48971228 -204285355 + (TG)n Simple_repeat Simple_repeat 2 45 0 267 265 29 0 chr2 48972306 48972374 -204284209 - L2 LINE L2 0 3272 3203 378 115 0 0 chr2 48973171 48973232 -204283351 + (TG)n Simple_repeat Simple_repeat 2 62 0 254 250 18 0 chr2 48973239 48973295 -204283288 - MER5A DNA MER1_type -113 76 20 215 290 241 31 chr2 48973965 48974127 -204282456 - MIR SINE MIR -10 252 57 376 229 12 0 chr2 48974204 48974287 -204282296 - MER5A DNA MER1_type 0 189 106 1969 129 0 11 chr2 48974297 48974583 -204282000 - AluSx SINE Alu -22 290 8 272 236 0 93 chr2 48975311 48975451 -204281132 - MER113 DNA MER1_type? -394 127 1 328 309 104 41 chr2 48975912 48976181 -204280402 - L2 LINE L2 -20 3252 2967 697 315 0 20 chr2 48976401 48976655 -204279928 - MER112 DNA MER1_type -10 250 2 263 267 57 48 chr2 48977346 48977451 -204279132 - MER117 DNA MER1_type -41 156 51 352 322 51 7 chr2 48979264 48979406 -204277177 + MIR SINE MIR 2 148 -64 752 264 18 32 chr2 48979440 48979660 -204276923 - L2 LINE L2 0 3313 3097 250 57 0 0 chr2 48980672 48980707 -204275876 + (TTG)n Simple_repeat Simple_repeat 2 180 0 2129 123 0 0 chr2 48980707 48980993 -204275590 - AluSx SINE Alu -4 308 1 325 341 8 8 chr2 48981111 48981130 -204275453 - MIR SINE MIR -88 174 156 410 225 0 0 chr2 48981130 48981210 -204275373 + MER116 DNA Mariner 1 80 0 325 341 8 8 chr2 48981210 48981313 -204275270 - MIR SINE MIR -105 157 52 617 237 25 0 chr2 48982731 48983187 -204273396 + (TCCA)n Simple_repeat Simple_repeat 1 467 0 758 282 90 43 chr2 48984362 48984579 -204272004 + MIR SINE MIR 1 211 -51 1164 204 18 9 chr2 48984579 48984799 -204271784 - MER58A DNA MER1_type 0 224 3 758 282 90 43 chr2 48984799 48984854 -204271729 + MIR SINE MIR 211 262 0 2010 128 0 0 chr2 48985096 48985408 -204271175 - AluSx SINE Alu 0 312 1 243 206 118 0 chr2 48985511 48985579 -204271004 - MIR3 SINE MIR -38 170 95 243 271 0 0 chr2 48986702 48986761 -204269822 - L3 LINE CR1 -251 1326 1268 403 292 0 0 chr2 48987410 48987499 -204269084 + MIR SINE MIR 64 152 -110 644 247 30 74 chr2 48989846 48990077 -204266506 + MIR SINE MIR 2 222 -40 306 295 16 54 chr2 48990708 48990837 -204265746 + MIR SINE MIR 18 141 -67 197 257 214 0 chr2 48991111 48991181 -204265402 + L3 LINE CR1 96 180 -1397 223 333 0 0 chr2 48992040 48992094 -204264489 + L2 LINE L2 3206 3259 -13 348 316 58 22 chr2 48992479 48992618 -204263965 - MER5B DNA MER1_type -34 144 1 239 203 14 87 chr2 48993169 48993238 -204263345 - MIR SINE MIR -90 172 109 183 343 128 0 chr2 48993345 48993447 -204263136 + MIR SINE MIR 136 250 -12 343 310 54 0 chr2 48994055 48994184 -204262399 + MIR SINE MIR 73 208 -54 462 318 83 10 chr2 48996361 48996553 -204260030 - MIR SINE MIR -32 230 25 188 138 77 92 chr2 48997019 48997084 -204259499 + MIR SINE MIR 23 86 -122 210 285 229 15 chr2 48997121 48997267 -204259316 - MIR SINE MIR -56 206 34 2193 112 0 3 chr2 49000496 49000799 -204255784 + AluSx SINE Alu 1 302 -10 322 98 0 0 chr2 49002441 49002492 -204254091 + MLT1D LTR MaLR 407 457 -48 216 0 0 0 chr2 49002492 49002516 -204254067 + (A)n Simple_repeat Simple_repeat 1 24 0 198 274 68 0 chr2 49003219 49003292 -204253291 + MIR SINE MIR 67 144 -64 1354 169 32 20 chr2 49006243 49006492 -204250091 + AluJo SINE Alu 37 288 -24 339 313 43 0 chr2 49007113 49007228 -204249355 - MIR SINE MIR -56 152 33 548 258 38 13 chr2 49007265 49007424 -204249159 - MIR SINE MIR 0 262 100 441 292 134 23 chr2 49007472 49007601 -204248982 - MIR SINE MIR -10 252 139 2280 92 0 25 chr2 49007601 49007918 -204248665 + AluSx SINE Alu 1 309 -3 441 292 134 23 chr2 49007918 49008004 -204248579 - MIR SINE MIR -123 139 13 306 327 210 10 chr2 49008638 49008843 -204247740 - MIR SINE MIR 0 262 17 204 273 0 0 chr2 49010909 49010953 -204245630 - L2 LINE L2 -23 3249 3206 2199 94 3 3 chr2 49011104 49011401 -204245182 + AluSp SINE Alu 2 298 -15 940 242 123 57 chr2 49011463 49011852 -204244731 - MER34C LTR ERV1 -1 584 147 1881 140 7 13 chr2 49011852 49012152 -204244431 + AluJo SINE Alu 1 298 -14 940 242 123 57 chr2 49012152 49012307 -204244276 - MER34C LTR ERV1 -438 147 4 258 105 0 0 chr2 49012308 49012346 -204244237 + (TG)n Simple_repeat Simple_repeat 2 39 0 384 282 15 34 chr2 49016352 49016519 -204240064 - MIR SINE MIR -75 187 27 197 349 151 33 chr2 49017711 49017923 -204238660 + L2 LINE L2 2952 3188 -84 518 295 52 16 chr2 49018032 49018225 -204238358 - MIR SINE MIR -25 237 38 1802 186 0 0 chr2 49018225 49018537 -204238046 - AluJo SINE Alu 0 312 1 227 323 43 19 chr2 49020923 49021084 -204235499 - L1ME LINE L1 -224 5897 5733 387 56 0 0 chr2 49023165 49023219 -204233364 + (TTGG)n Simple_repeat Simple_repeat 2 55 0 1933 125 3 14 chr2 49023219 49023508 -204233075 - AluSx SINE Alu -26 286 1 741 238 184 47 chr2 49023818 49024185 -204232398 - MLT1J LTR MaLR -18 493 65 1971 140 0 10 chr2 49024185 49024485 -204232098 + AluJb SINE Alu 1 297 -15 741 238 184 47 chr2 49024485 49024520 -204232063 - MLT1J LTR MaLR -446 65 36 236 239 18 83 chr2 49027355 49027464 -204229119 + L2 LINE L2 2953 3054 -218 230 325 18 68 chr2 49028567 49028644 -204227939 + MIR SINE MIR 43 109 -153 2148 102 0 7 chr2 49028644 49028939 -204227644 - AluSg1 SINE Alu -3 306 14 230 325 18 68 chr2 49028939 49029024 -204227559 + MIR SINE MIR 109 197 -65 435 295 23 0 chr2 49029376 49029505 -204227078 + MIR SINE MIR 29 160 -102 1628 120 0 4 chr2 49029511 49029736 -204226847 + AluJb SINE Alu 6 229 -83 1821 137 58 0 chr2 49029736 49030013 -204226570 + AluSx SINE Alu 1 294 -18 557 138 11 0 chr2 49030032 49030126 -204226457 + AluJb SINE Alu 217 311 -1 271 322 0 70 chr2 49030126 49030241 -204226342 + MIR SINE MIR 156 262 0 270 313 45 37 chr2 49031196 49031330 -204225253 + MIR3 SINE MIR 3 137 -71 247 332 42 24 chr2 49031704 49031905 -204224678 + L3 LINE CR1 1310 1570 -7 318 310 46 29 chr2 49032763 49032937 -204223646 + MIR SINE MIR 33 209 -53 388 240 23 47 chr2 49032958 49033087 -204223496 - MER117 DNA MER1_type 0 197 72 2510 157 29 72 chr2 49034468 49034641 -204221942 - MER34B LTR ERV1 0 565 386 2609 51 0 0 chr2 49034641 49034937 -204221646 + AluY SINE Alu 1 296 -15 2510 157 29 72 chr2 49034937 49035349 -204221234 - MER34B LTR ERV1 -179 386 5 409 73 0 0 chr2 49036294 49036349 -204220234 - MSTD LTR MaLR 0 457 403 967 137 0 0 chr2 49036361 49036492 -204220091 - FLAM_C SINE Alu -12 131 1 24 0 0 0 chr2 49036492 49036516 -204220067 + AT_rich Low_complexity Low_complexity 1 24 0 1632 161 96 15 chr2 49036516 49036840 -204219743 - MSTD LTR MaLR -46 350 1 376 313 96 0 chr2 49037239 49037405 -204219178 + MIR SINE MIR 16 197 -65 189 0 0 0 chr2 49038499 49038520 -204218063 + (A)n Simple_repeat Simple_repeat 1 21 0 509 265 28 16 chr2 49041143 49041319 -204215264 - MIR SINE MIR -68 140 15 506 258 63 0 chr2 49042897 49043056 -204213527 - MIR SINE MIR -34 228 60 23 54 0 0 chr2 49044917 49044954 -204211629 + AT_rich Low_complexity Low_complexity 1 37 0 270 247 67 11 chr2 49045759 49045848 -204210735 - Charlie7 DNA MER1_type -2518 94 1 642 240 139 19 chr2 49047049 49047257 -204209326 + MIR SINE MIR 29 261 -1 778 282 95 24 chr2 49048663 49049000 -204207583 - L1MC4 LINE L1 -133 7909 7549 289 103 0 81 chr2 49050012 49050099 -204206484 + (TTCC)n Simple_repeat Simple_repeat 2 81 0 2158 121 19 3 chr2 49050111 49050418 -204206165 - AluSx SINE Alu 0 312 1 2135 180 70 35 chr2 49051596 49051718 -204204865 + MLT1D LTR MaLR 1 117 -388 2234 94 0 7 chr2 49051718 49052034 -204204549 + AluSx SINE Alu 1 314 0 2135 180 70 35 chr2 49052034 49052398 -204204185 + MLT1D LTR MaLR 117 505 0 216 292 0 34 chr2 49053119 49053208 -204203375 + C-rich Low_complexity Low_complexity 4 89 0 312 27 0 0 chr2 49054390 49054427 -204202156 + (CA)n Simple_repeat Simple_repeat 2 38 0 228 35 0 0 chr2 49054426 49054455 -204202128 + (GA)n Simple_repeat Simple_repeat 2 30 0 * 210 37 0 0 chr2 49054621 49054648 -204201935 + (CA)n Simple_repeat Simple_repeat 2 28 0 * 336 24 0 0 chr2 49054647 49054688 -204201895 + (GA)n Simple_repeat Simple_repeat 2 42 0 225 185 74 0 chr2 49056071 49056125 -204200458 + L2 LINE L2 3205 3262 -10 293 173 125 87 chr2 49056414 49056518 -204200065 + MER94 DNA DNA 5 112 -22 2140 113 0 22 chr2 49057354 49057665 -204198918 - AluSc SINE Alu -5 304 1 1086 163 0 11 chr2 49057678 49057856 -204198727 - AluSg/x SINE Alu 0 310 135 287 298 152 19 chr2 49058016 49058174 -204198409 + MIR SINE MIR 8 186 -76 2208 190 32 11 chr2 49059585 49059694 -204196889 - L1M4 LINE L1 -1083 5063 4958 2257 142 0 0 chr2 49059694 49060005 -204196578 - AluSx SINE Alu -1 311 1 2208 190 32 11 chr2 49060005 49060452 -204196131 - L1M4 LINE L1 -1188 4958 4495 2189 102 10 13 chr2 49060452 49060765 -204195818 - AluSq SINE Alu -1 312 1 525 97 0 0 chr2 49060867 49060939 -204195644 - Alu SINE Alu -237 73 2 2001 161 62 51 chr2 49062991 49063445 -204193138 + MLT1C LTR MaLR 9 467 0 1270 259 105 13 chr2 49063530 49063977 -204192606 + MLT1J LTR MaLR 20 507 -4 330 269 74 47 chr2 49065327 49065476 -204191107 + L1ME4a LINE L1 5285 5437 -922 435 143 20 20 chr2 49065549 49065647 -204190936 + GA-rich Low_complexity Low_complexity 4 101 0 225 319 0 0 chr2 49065684 49065756 -204190827 + L1P4 LINE L1 5536 5607 -558 346 259 22 22 chr2 49066025 49066160 -204190423 + L1MC5 LINE L1 7751 7885 -76 562 296 37 1 chr2 49066200 49066392 -204190191 + L1ME4a LINE L1 5592 5793 -328 236 272 41 65 chr2 49066471 49066640 -204189943 + L1ME4a LINE L1 5956 6120 -1 1887 154 28 0 chr2 49066692 49066978 -204189605 + AluJb SINE Alu 1 294 -18 495 110 0 73 chr2 49066978 49067114 -204189469 + (GGGGA)n Simple_repeat Simple_repeat 1 126 0 402 98 0 0 chr2 49067428 49067489 -204189094 - AluSg SINE Alu -8 302 242 5319 222 22 25 chr2 49067491 49068576 -204188007 - L1MDa LINE L1 -2324 4216 3136 2284 99 0 16 chr2 49068576 49068741 -204187842 - AluSx SINE Alu -14 298 139 2255 111 0 0 chr2 49068741 49069030 -204187553 - AluSc SINE Alu -20 289 1 2284 99 0 16 chr2 49069030 49069167 -204187416 - AluSx SINE Alu -173 139 1 5319 222 22 25 chr2 49069167 49069594 -204186989 - L1MDa LINE L1 -3404 3136 2709 374 146 73 73 chr2 49069885 49069981 -204186602 - L1MDa LINE L1 -3898 2642 2547 1796 111 0 0 chr2 49070022 49070256 -204186327 - AluSg SINE Alu -76 234 1 3103 169 90 7 chr2 49070310 49070924 -204185659 - L1MDa LINE L1 -5742 798 134 2061 130 27 0 chr2 49071077 49071369 -204185214 - AluSx SINE Alu -12 300 1 204 125 0 0 chr2 49071508 49071540 -204185043 + (A)n Simple_repeat Simple_repeat 1 32 0 2221 138 0 0 chr2 49073149 49073453 -204183130 - AluSx SINE Alu -8 304 1 232 265 0 29 chr2 49073455 49073557 -204183026 - HAL1 LINE L1 -423 2084 1986 879 280 91 9 chr2 49073558 49073908 -204182675 - HAL1 LINE L1 -565 1942 1564 252 282 23 38 chr2 49073907 49074038 -204182545 - HAL1 LINE L1 -1510 997 869 * 2173 123 0 3 chr2 49074038 49074339 -204182244 - AluSx SINE Alu -12 300 1 466 182 111 0 chr2 49074549 49074648 -204181935 + MSTC LTR MaLR 1 110 -318 2307 106 3 0 chr2 49075592 49075894 -204180689 - AluSp SINE Alu -10 303 1 689 200 0 0 chr2 49076316 49076446 -204180137 - FLAM_C SINE Alu -3 130 1 3562 79 2 15 chr2 49076514 49076993 -204179590 + MER1A DNA MER1_type 57 529 0 443 261 122 22 chr2 49077049 49077229 -204179354 + MIR SINE MIR 60 257 -5 463 154 44 0 chr2 49077732 49077823 -204178760 + L1M4 LINE L1 1 95 -6447 2197 186 9 38 chr2 49078072 49078434 -204178149 - LTR39 LTR ERV1 -7 776 428 2231 118 7 0 chr2 49078434 49078740 -204177843 + AluSx SINE Alu 1 308 -4 2197 186 9 38 chr2 49078740 49078823 -204177760 - LTR39 LTR ERV1 -355 428 344 1154 79 0 0 chr2 49078826 49078965 -204177618 + AluY SINE Alu 158 296 -15 1023 197 148 40 chr2 49078966 49079270 -204177313 - LTR39 LTR ERV1 -446 337 1 1341 258 66 48 chr2 49079293 49079963 -204176620 + HAL1 LINE L1 100 781 -1726 1080 206 33 13 chr2 49079963 49080229 -204176354 - MLT1D LTR MaLR 0 505 206 378 0 0 0 chr2 49080231 49080273 -204176310 + (TG)n Simple_repeat Simple_repeat 2 43 0 659 168 84 14 chr2 49080286 49080429 -204176154 - MLT1D LTR MaLR -352 153 1 283 230 14 27 chr2 49080429 49080503 -204176080 + HAL1 LINE L1 777 849 -1658 594 316 94 37 chr2 49080523 49080906 -204175677 - L1 LINE L1 -788 5358 4954 2401 98 3 0 chr2 49081201 49081508 -204175075 - AluSx SINE Alu -4 308 1 24 0 0 0 chr2 49081537 49081561 -204175022 + AT_rich Low_complexity Low_complexity 1 24 0 672 237 155 32 chr2 49081733 49082011 -204174572 - L2 LINE L2 -8 3305 2994 5590 120 9 36 chr2 49082378 49082536 -204174047 - L1MA3 LINE L1 -5 6300 6139 2052 108 20 27 chr2 49082536 49082857 -204173726 - AluSx SINE Alu 0 312 1 5590 120 9 36 chr2 49082857 49083711 -204172872 - L1MA3 LINE L1 -166 6139 5264 1868 168 3 3 chr2 49083711 49084002 -204172581 + AluJb SINE Alu 1 291 -21 5590 120 9 36 chr2 49084002 49084297 -204172286 - L1MA3 LINE L1 -1041 5264 4963 967 97 0 22 chr2 49084297 49084431 -204172152 - FLAM_C SINE Alu -2 131 1 5590 120 9 36 chr2 49084431 49084824 -204171759 - L1MA3 LINE L1 -1342 4963 4623 17942 146 41 12 chr2 49084835 49084887 -204171696 - L1M1 LINE L1 -4498 3067 3018 1899 179 0 3 chr2 49084887 49085199 -204171384 - AluJo SINE Alu -1 311 1 17942 146 41 12 chr2 49085199 49085829 -204170754 - L1M1 LINE L1 -4547 3018 2408 2107 147 3 0 chr2 49085829 49086136 -204170447 - AluSx SINE Alu 0 312 5 17942 146 41 12 chr2 49086136 49088445 -204168138 - L1M1 LINE L1 -5157 2408 20 2331 100 3 0 chr2 49089085 49089385 -204167198 - AluSx SINE Alu -11 301 1 1789 166 20 7 chr2 49089388 49089683 -204166900 - AluJo SINE Alu -13 299 1 1740 203 0 0 chr2 49089696 49089996 -204166587 - AluJb SINE Alu -12 300 1 220 227 102 23 chr2 49090033 49090121 -204166462 - L2 LINE L2 -8 3264 3170 1988 133 0 3 chr2 49090464 49090749 -204165834 + AluSx SINE Alu 14 297 -15 1782 169 7 3 chr2 49091740 49092036 -204164547 - AluJo SINE Alu -15 297 1 1150 153 77 158 chr2 49092526 49092930 -204163653 + MLT1A2 LTR MaLR 1 371 -3 915 146 0 0 chr2 49092999 49093136 -204163447 + FLAM_C SINE Alu 1 137 -6 288 229 48 0 chr2 49093489 49093572 -204163011 - MIR SINE MIR -71 191 105 37627 93 27 34 chr2 49094712 49101149 -204155434 + HERV17 LTR ERV1 28 4944 0 536 189 74 16 chr2 49101150 49101364 -204155219 + HERV17 LTR ERV1 698 1022 -5874 * 7749 99 31 35 chr2 49101362 49103413 -204153170 + pTR5 LTR ERV1 504 8399 0 361 214 31 20 chr2 49103413 49103511 -204153072 + LTR30 LTR ERV1 544 642 -80 1568 110 4 4 chr2 49103512 49103739 -204152844 + pTR5 LTR ERV1 170 396 -2042 337 278 83 7 chr2 49103866 49104010 -204152573 + MLT1K LTR MaLR 93 247 -341 320 231 31 0 chr2 49104183 49104248 -204152335 + MLT1K LTR MaLR 522 588 0 2217 116 7 0 chr2 49104427 49104729 -204151854 + AluSx SINE Alu 1 304 -8 401 247 106 106 chr2 49105468 49105495 -204151088 - L1ME4a LINE L1 -4 6117 6091 2074 126 3 0 chr2 49105495 49105788 -204150795 + AluSx SINE Alu 1 294 -18 401 247 106 106 chr2 49105788 49106355 -204150228 - L1ME4a LINE L1 -29 6092 5523 2078 133 3 13 chr2 49107337 49107652 -204148931 - AluSx SINE Alu 0 312 1 1282 152 62 0 chr2 49107986 49108196 -204148387 + AluJb SINE Alu 84 306 -6 285 212 212 18 chr2 49108294 49108407 -204148176 - L2 LINE L2 0 3313 3179 2421 66 23 0 chr2 49108935 49109237 -204147346 + AluY SINE Alu 1 309 -2 807 182 0 0 chr2 49109270 49109402 -204147181 + AluJo/FLAM SINE Alu 1 132 -170 2091 147 0 6 chr2 49109404 49109718 -204146865 + AluSx SINE Alu 1 312 0 637 271 34 60 chr2 49109847 49109887 -204146696 - L1MC/D LINE L1 -535 5631 5592 2167 76 69 7 chr2 49109887 49110176 -204146407 - AluSq SINE Alu -6 307 1 637 271 34 60 chr2 49110176 49110539 -204146044 - L1MC/D LINE L1 -574 5592 5329 2449 67 0 10 chr2 49110539 49110838 -204145745 - AluY SINE Alu -15 296 1 637 271 34 60 chr2 49110838 49110889 -204145694 - L1MC/D LINE L1 -837 5329 5278 294 263 12 0 chr2 49111366 49111446 -204145137 + L1ME LINE L1 5745 5825 -296 748 194 0 22 chr2 49111449 49111583 -204145000 + FLAM_C SINE Alu 1 131 -2 2411 80 0 7 chr2 49111778 49112080 -204144503 - AluSc SINE Alu -9 300 1 276 359 60 6 chr2 49112436 49112603 -204143980 + L1MEd LINE L1 445 620 -5499 812 279 121 47 chr2 49112734 49113182 -204143401 - L2 LINE L2 0 3313 2833 776 160 94 72 chr2 49113278 49113459 -204143124 + MER20 DNA MER1_type 33 217 -2 619 245 62 58 chr2 49113462 49113498 -204143085 - L2 LINE L2 -990 2324 2290 922 99 0 23 chr2 49113498 49113629 -204142954 + FLAM_C SINE Alu 5 132 -1 619 245 62 58 chr2 49113629 49113849 -204142734 - L2 LINE L2 -1024 2290 2067 1322 219 253 33 chr2 49113850 49113905 -204142678 - L2 LINE L2 -1935 1379 1337 1555 163 49 17 chr2 49113905 49114193 -204142390 + AluJo SINE Alu 1 297 -15 1322 219 253 33 chr2 49114193 49114812 -204141771 - L2 LINE L2 -1977 1337 556 1981 124 34 17 chr2 49115006 49115297 -204141286 - AluSx SINE Alu -16 296 1 972 89 0 57 chr2 49115338 49115495 -204141088 + L1PA16 LINE L1 6016 6163 -3 194 0 0 37 chr2 49115570 49115597 -204140986 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 2928 41 0 0 chr2 49115597 49115940 -204140643 - L1PA5 LINE L1 -16 6138 5796 304 286 0 0 chr2 49117082 49117159 -204139424 + MIR SINE MIR 75 151 -111 1041 216 117 53 chr2 49117550 49117833 -204138750 - AluJb SINE Alu 0 302 2 2312 83 17 0 chr2 49118794 49118959 -204137624 - AluY SINE Alu -16 295 121 197 33 33 0 chr2 49118959 49118989 -204137594 + (TTTTG)n Simple_repeat Simple_repeat 5 35 0 2312 83 17 0 chr2 49118989 49119113 -204137470 - AluY SINE Alu -190 121 1 22 0 0 0 chr2 49120114 49120136 -204136447 + AT_rich Low_complexity Low_complexity 1 22 0 358 254 129 45 chr2 49120364 49120520 -204136063 + MIR SINE MIR 20 202 -60 1758 146 0 67 chr2 49120520 49120836 -204135747 + AluSx SINE Alu 2 296 -16 358 254 129 45 chr2 49120836 49120903 -204135680 + MIR SINE MIR 202 262 0 1067 106 33 0 chr2 49121633 49121784 -204134799 + AluSg/x SINE Alu 137 292 -20 22 0 0 0 chr2 49121802 49121824 -204134759 + AT_rich Low_complexity Low_complexity 1 22 0 219 253 12 36 chr2 49121955 49122038 -204134545 + A-rich Low_complexity Low_complexity 4 84 0 488 284 71 35 chr2 49122976 49123173 -204133410 - MIR SINE MIR -44 218 15 434 298 113 0 chr2 49123178 49123426 -204133157 + L2 LINE L2 1752 2027 -1287 276 250 147 37 chr2 49123455 49123591 -204132992 + MIR SINE MIR 112 262 0 546 111 62 0 chr2 49123632 49123713 -204132870 - AluSg/x SINE Alu -14 298 213 1152 86 26 0 chr2 49123713 49123865 -204132718 - AluSq SINE Alu -157 156 1 307 248 224 16 chr2 49124239 49124364 -204132219 - MER5A DNA MER1_type 0 189 39 2165 116 10 3 chr2 49125141 49125444 -204131139 + AluSg SINE Alu 1 305 -5 670 119 50 0 chr2 49125885 49125986 -204130597 + FLAM_C SINE Alu 26 131 -12 180 0 0 0 chr2 49127899 49127919 -204128664 + (A)n Simple_repeat Simple_repeat 1 20 0 239 291 236 20 chr2 49128476 49128624 -204127959 - MER5A DNA MER1_type 0 189 10 198 0 0 0 chr2 49129216 49129238 -204127345 + (A)n Simple_repeat Simple_repeat 1 22 0 301 172 0 47 chr2 49129922 49129986 -204126597 + LTR37B LTR ERV1 1 61 -407 2978 128 10 85 chr2 49129991 49130606 -204125977 - L1MB3 LINE L1 -2 6181 5613 717 171 127 6 chr2 49130606 49130764 -204125819 + MSTB2 LTR MaLR 2 178 -279 806 174 7 20 chr2 49131066 49131215 -204125368 + MLT1A1 LTR MaLR 1 147 -218 1493 69 0 0 chr2 49131227 49131402 -204125181 + AluSq SINE Alu 5 179 -134 255 31 0 0 chr2 49132135 49132167 -204124416 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2432 148 18 36 chr2 49132197 49132248 -204124335 - L1MB7 LINE L1 -19 6165 6115 2302 94 3 3 chr2 49132248 49132547 -204124036 + AluSq SINE Alu 1 299 -14 2432 148 18 36 chr2 49132547 49132940 -204123643 - L1MB7 LINE L1 -69 6115 5729 1930 159 7 0 chr2 49132992 49133281 -204123302 + AluJo SINE Alu 1 291 -21 225 83 0 0 chr2 49133681 49133717 -204122866 + (A)n Simple_repeat Simple_repeat 1 36 0 398 186 12 35 chr2 49134253 49134339 -204122244 + 7SLRNA srpRNA srpRNA 229 312 -8 434 67 0 0 chr2 49134940 49135000 -204121583 - AluSp/q SINE Alu -16 297 238 539 91 0 13 chr2 49135101 49135178 -204121405 - AluS SINE Alu -237 76 1 830 149 0 112 chr2 49135281 49135401 -204121182 + AluSx SINE Alu 1 94 -218 2624 55 0 3 chr2 49135401 49135712 -204120871 + AluY SINE Alu 1 310 -1 830 149 0 112 chr2 49135712 49135779 -204120804 + AluSx SINE Alu 94 167 -145 360 0 0 0 chr2 49135793 49135833 -204120750 + (CA)n Simple_repeat Simple_repeat 2 41 0 1277 132 5 25 chr2 49135862 49136066 -204120517 + AluSg/x SINE Alu 108 307 -5 370 252 36 43 chr2 49136650 49136789 -204119794 + MIR SINE MIR 5 142 -120 294 344 78 0 chr2 49137312 49137440 -204119143 + L2 LINE L2 2497 2634 -680 33 43 0 0 chr2 49138441 49138488 -204118095 + AT_rich Low_complexity Low_complexity 1 47 0 2295 125 0 0 chr2 49138858 49139170 -204117413 + AluSx SINE Alu 1 312 0 21 0 0 0 chr2 49139226 49139247 -204117336 + AT_rich Low_complexity Low_complexity 1 21 0 840 153 15 0 chr2 49139247 49139378 -204117205 - FLAM_C SINE Alu 0 133 1 208 250 220 0 chr2 49139538 49139638 -204116945 - L2 LINE L2 -4 3309 3188 1786 112 97 7 chr2 49139903 49140181 -204116402 + AluSp SINE Alu 1 303 -10 2304 90 14 0 chr2 49140230 49140520 -204116063 - AluSx SINE Alu -18 294 1 754 132 53 0 chr2 49140784 49140898 -204115685 - FLAM_C SINE Alu -21 122 3 252 169 195 13 chr2 49142866 49142943 -204113640 - MIR SINE MIR -70 192 102 21 0 0 0 chr2 49143428 49143449 -204113134 + AT_rich Low_complexity Low_complexity 1 21 0 454 248 119 16 chr2 49143709 49143898 -204112685 + MIR SINE MIR 1 208 -54 994 166 18 6 chr2 49145694 49145863 -204110720 - FRAM SINE Alu -13 163 1 207 0 0 0 chr2 49146521 49146544 -204110039 + (T)n Simple_repeat Simple_repeat 1 23 0 205 151 12 70 chr2 49147255 49147341 -204109242 + (CCCG)n Simple_repeat Simple_repeat 2 82 0 221 298 137 50 chr2 49148879 49149040 -204107543 + MIR SINE MIR 87 261 -1 225 383 26 35 chr2 49149257 49149484 -204107099 - L2 LINE L2 -188 3084 2860 1537 185 13 40 chr2 49151062 49151220 -204105363 - AluJo SINE Alu -17 295 147 2331 62 0 4 chr2 49151220 49151493 -204105090 - AluY SINE Alu -6 305 34 1537 185 13 40 chr2 49151493 49151637 -204104946 - AluJo SINE Alu -165 147 1 840 134 140 6 chr2 49151670 49151841 -204104742 + MER105 DNA DNA 6 199 -5 506 211 29 10 chr2 49152070 49152174 -204104409 + MER81 DNA DNA 2 107 -7 711 242 112 23 chr2 49152448 49152663 -204103920 - MER115 DNA AcHobo -459 234 1 345 332 101 65 chr2 49152776 49153174 -204103409 + L2 LINE L2 2857 3268 -4 21 36 0 0 chr2 49153268 49153296 -204103287 + AT_rich Low_complexity Low_complexity 1 28 0 2263 124 0 0 chr2 49153374 49153680 -204102903 + AluSg1 SINE Alu 2 307 -2 894 113 0 0 chr2 49154788 49154903 -204101680 - AluSq/x SINE Alu -197 115 1 2194 128 0 7 chr2 49154912 49155218 -204101365 - AluSx SINE Alu -8 304 1 397 229 64 133 chr2 49155270 49155587 -204100996 - L1MC4 LINE L1 -2 8040 7654 2093 138 3 0 chr2 49155587 49155883 -204100700 + AluJb SINE Alu 1 297 -15 397 229 64 133 chr2 49155883 49156011 -204100572 - L1MC4 LINE L1 -388 7654 7519 874 173 13 13 chr2 49156017 49156188 -204100395 - FRAM SINE Alu 0 167 1 2306 91 3 3 chr2 49156194 49156491 -204100092 - AluY SINE Alu -13 298 2 2050 134 3 0 chr2 49156497 49156781 -204099802 - AluSx SINE Alu -23 289 5 1913 231 29 103 chr2 49156792 49157681 -204098902 - L1MC4 LINE L1 -418 7624 6802 198 71 0 0 chr2 49158096 49158124 -204098459 + (CTG)n Simple_repeat Simple_repeat 2 29 0 284 128 0 0 chr2 49158372 49158411 -204098172 + 5S rRNA rRNA 4 42 -79 188 250 0 36 chr2 49158715 49158771 -204097812 + MIR SINE MIR 71 124 -84 192 125 0 0 chr2 49158944 49158976 -204097607 + (TC)n Simple_repeat Simple_repeat 1 32 0 475 292 84 0 chr2 49159025 49159179 -204097404 - MIR3 SINE MIR -9 199 33 1269 188 0 35 chr2 49159310 49159565 -204097018 - AluJb SINE Alu 0 312 67 519 130 52 0 chr2 49159658 49159735 -204096848 - AluJb SINE Alu -229 83 3 482 303 20 25 chr2 49159769 49159967 -204096616 - MIR SINE MIR 0 262 66 192 284 45 34 chr2 49160039 49160127 -204096456 - L2 LINE L2 0 3272 3184 597 133 0 0 chr2 49160128 49160211 -204096372 + AluS SINE Alu 2 84 -229 2446 88 0 3 chr2 49160281 49160589 -204095994 + AluSx SINE Alu 1 307 -5 180 273 18 18 chr2 49161603 49161658 -204094925 + L3 LINE CR1 1517 1571 -6 579 279 46 10 chr2 49163675 49163872 -204092711 + MIR SINE MIR 37 240 -22 210 171 0 0 chr2 49164126 49164167 -204092416 + CT-rich Low_complexity Low_complexity 2 42 0 594 254 53 35 chr2 49164503 49164731 -204091852 - MIR SINE MIR -14 248 17 1769 219 43 166 chr2 49166093 49166815 -204089768 - MER45C DNA AcHobo -320 633 1 30 27 0 0 chr2 49167013 49167050 -204089533 + AT_rich Low_complexity Low_complexity 1 37 0 206 214 0 0 chr2 49167905 49167947 -204088636 + L2 LINE L2 3264 3305 -8 201 333 103 43 chr2 49168594 49168711 -204087872 + MIR3 SINE MIR 71 194 -14 204 206 0 0 chr2 49168793 49168827 -204087756 + polypyrimidine Low_complexity Low_complexity 2 35 0 543 289 99 13 chr2 49169320 49169552 -204087031 + MIR SINE MIR 11 262 0 2684 116 19 9 chr2 49169698 49170122 -204086461 + L1MA2 LINE L1 5877 6304 0 765 191 99 0 chr2 49171400 49171562 -204085021 + MER5B DNA MER1_type 1 178 0 2250 124 0 0 chr2 49171651 49171957 -204084626 + AluSx SINE Alu 1 306 -6 205 302 66 36 chr2 49172277 49172420 -204084163 - MIR SINE MIR -59 149 19 270 200 0 18 chr2 49173167 49173222 -204083361 - MLT1K LTR MaLR -347 241 188 3022 180 72 16 chr2 49173330 49174085 -204082498 + L1PA3 LINE L1 5443 6226 0 2161 118 0 3 chr2 49174121 49174410 -204082173 + AluSx SINE Alu 1 288 -24 1582 166 89 3 chr2 49174423 49174768 -204081815 + L1MB5 LINE L1 5812 6180 0 2081 146 12 6 chr2 49174853 49175195 -204081388 - MER2 DNA MER2_type 0 344 1 352 314 184 29 chr2 49175206 49175385 -204081198 - L2 LINE L2 0 3272 3122 231 36 0 0 chr2 49175385 49175413 -204081170 + (TTA)n Simple_repeat Simple_repeat 1 28 0 352 314 184 29 chr2 49175413 49175548 -204081035 - L2 LINE L2 -150 3122 2909 1893 174 0 13 chr2 49175800 49176099 -204080484 + AluJo SINE Alu 1 295 -17 2277 117 21 29 chr2 49176245 49176621 -204079962 + THE1C LTR MaLR 1 373 -2 216 320 93 0 chr2 49178020 49178117 -204078466 - MIR3 SINE MIR -91 117 12 1492 249 28 23 chr2 49178583 49178714 -204077869 + L2 LINE L2 2485 2614 -700 1070 156 0 12 chr2 49178714 49178881 -204077702 - FRAM SINE Alu -1 165 1 1492 249 28 23 chr2 49178881 49179219 -204077364 + L2 LINE L2 2614 2956 -358 586 185 0 9 chr2 49179211 49179319 -204077264 + L2 LINE L2 3182 3288 -25 * 1572 202 35 3 chr2 49179320 49179607 -204076976 + AluJo SINE Alu 1 296 -16 189 107 0 0 chr2 49179625 49179653 -204076930 + (TGAA)n Simple_repeat Simple_repeat 4 31 0 218 289 0 0 chr2 49180798 49180850 -204075733 - L2 LINE L2 -11 3261 3210 296 237 66 0 chr2 49180884 49180960 -204075623 + MIR SINE MIR 182 262 0 372 324 135 7 chr2 49180972 49181120 -204075463 - MIR SINE MIR -76 186 20 2285 111 0 0 chr2 49181424 49181730 -204074853 - AluSx SINE Alu -6 306 1 713 221 9 136 chr2 49183251 49183414 -204073169 + L1ME1 LINE L1 4847 4952 -1194 1524 127 4 9 chr2 49183414 49183643 -204072940 + AluSx SINE Alu 1 228 -84 713 221 9 136 chr2 49183643 49183795 -204072788 + L1ME1 LINE L1 4952 5122 -1024 389 167 0 0 chr2 49183789 49183849 -204072734 + L1MB3 LINE L1 6083 6142 -41 * 936 148 0 7 chr2 49183850 49183992 -204072591 + AluJb SINE Alu 1 141 -171 365 111 0 16 chr2 49183994 49184057 -204072526 + AluSp/q SINE Alu 241 302 -1 339 105 0 0 chr2 49184064 49184121 -204072462 + L1MB3 LINE L1 6127 6183 0 2117 121 0 0 chr2 49184154 49184462 -204072121 + AluSx SINE Alu 5 312 0 3869 187 37 32 chr2 49184517 49184872 -204071711 + L1ME1 LINE L1 5127 5479 -687 1653 158 57 27 chr2 49184872 49185169 -204071414 + AluJb SINE Alu 1 306 -6 3869 187 37 32 chr2 49185169 49185849 -204070734 + L1ME1 LINE L1 5479 6163 -3 521 316 179 0 chr2 49185904 49186122 -204070461 + MIR SINE MIR 2 258 -4 2352 67 0 0 chr2 49187097 49187395 -204069188 + AluSq SINE Alu 1 298 -15 635 260 40 31 chr2 49187441 49187668 -204068915 + LTR33 LTR ERVL 21 249 -272 2029 115 7 3 chr2 49187789 49188084 -204068499 - AluSx SINE Alu -16 296 1 1622 139 60 54 chr2 49188084 49188360 -204068223 + LTR32 LTR ERVL 32 312 -159 2291 59 0 29 chr2 49188360 49188666 -204067917 - AluY SINE Alu -14 297 1 1622 139 60 54 chr2 49188666 49188705 -204067878 + LTR32 LTR ERVL 312 349 -122 255 200 60 0 chr2 49188707 49188757 -204067826 + LTR32 LTR ERVL 316 368 -103 802 182 19 13 chr2 49188757 49188911 -204067672 + LTR32 LTR ERVL 317 471 0 278 152 121 0 chr2 49188911 49188977 -204067606 + LTR33 LTR ERVL 356 429 -92 2366 74 0 3 chr2 49189139 49189438 -204067145 + AluSg SINE Alu 3 300 -10 988 157 30 18 chr2 49190184 49190350 -204066233 + FAM SINE Alu 1 168 -7 728 222 16 32 chr2 49190384 49190569 -204066014 + MIR SINE MIR 80 261 -1 189 195 0 0 chr2 49191243 49191284 -204065299 + CT-rich Low_complexity Low_complexity 2 42 0 360 293 239 17 chr2 49191291 49191530 -204065053 - L2 LINE L2 -17 3296 3005 306 276 96 64 chr2 49191878 49192034 -204064549 + MIR SINE MIR 96 256 -6 764 221 66 6 chr2 49192102 49192317 -204064266 + MIR SINE MIR 15 243 -19 713 232 200 69 chr2 49192339 49192830 -204063753 + MLT1H1 LTR MaLR 1 555 0 226 176 0 29 chr2 49192831 49192899 -204063684 + (CATA)n Simple_repeat Simple_repeat 2 67 0 229 254 16 16 chr2 49193193 49193256 -204063327 - MIR SINE MIR -3 259 197 1610 233 118 18 chr2 49193264 49193776 -204062807 + MLT1G1 LTR MaLR 1 595 0 314 347 34 20 chr2 49193793 49193922 -204062661 + L2 LINE L2 3164 3297 -16 2163 113 0 0 chr2 49193922 49194223 -204062360 + AluSx SINE Alu 1 301 -11 314 347 34 20 chr2 49194223 49194240 -204062343 + L2 LINE L2 3297 3312 -1 404 241 11 11 chr2 49194269 49194374 -204062209 - MIR SINE MIR -42 166 62 471 101 29 0 chr2 49194374 49194443 -204062140 - MSTC LTR MaLR -357 71 1 1748 163 0 3 chr2 49195016 49195305 -204061278 + AluJb SINE Alu 1 288 -24 464 143 176 59 chr2 49196328 49196447 -204060136 - MIR SINE MIR -10 252 120 341 279 103 22 chr2 49196626 49196762 -204059821 + MIR3 SINE MIR 7 153 -55 24 0 0 0 chr2 49198868 49198892 -204057691 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr2 49201175 49201198 -204055385 + AT_rich Low_complexity Low_complexity 1 23 0 1107 128 0 28 chr2 49201198 49201378 -204055205 + AluSg/x SINE Alu 121 295 -15 2146 123 0 0 chr2 49201825 49202134 -204054449 - AluSx SINE Alu -3 309 1 216 214 54 18 chr2 49202224 49202280 -204054303 + MIR SINE MIR 59 116 -146 324 266 36 22 chr2 49202302 49202441 -204054142 - L1MC4 LINE L1 0 8042 7902 226 257 14 0 chr2 49202441 49202511 -204054072 + (TA)n Simple_repeat Simple_repeat 1 71 0 1751 138 20 27 chr2 49202560 49202858 -204053725 + AluJo SINE Alu 1 296 -16 241 231 51 8 chr2 49202876 49202993 -204053590 - L1MC4 LINE L1 -232 7810 7689 1110 200 60 0 chr2 49203000 49203250 -204053333 - AluJo SINE Alu -20 292 28 937 219 53 64 chr2 49203297 49203580 -204053003 - L1MC4 LINE L1 -409 7633 7354 667 261 66 24 chr2 49203807 49204018 -204052565 + MIR SINE MIR 31 250 -12 297 268 17 50 chr2 49204088 49204226 -204052357 - MIR SINE MIR -83 125 1 1949 133 0 3 chr2 49204311 49204605 -204051978 - AluSx SINE Alu -19 293 1 324 314 9 0 chr2 49205974 49206079 -204050504 - MIR SINE MIR -5 257 152 844 256 81 72 chr2 49206397 49206855 -204049728 - L2 LINE L2 -10 3303 2842 425 107 0 0 chr2 49206916 49206972 -204049611 + Alu SINE Alu 2 57 -254 789 158 0 15 chr2 49208175 49208308 -204048275 + FLAM_C SINE Alu 2 132 -11 1360 154 38 8 chr2 49209740 49210006 -204046577 + L1MA4 LINE L1 6024 6297 -3 2116 128 0 0 chr2 49210115 49210427 -204046156 + AluSx SINE Alu 1 312 0 327 85 0 0 chr2 49211871 49211918 -204044665 + (TTCA)n Simple_repeat Simple_repeat 3 49 0 206 324 124 49 chr2 49211929 49212114 -204044469 - L2 LINE L2 -38 3234 3036 785 167 0 0 chr2 49212141 49212261 -204044322 + FLAM_C SINE Alu 5 124 -19 1940 140 0 3 chr2 49212780 49213080 -204043503 - AluJo SINE Alu -4 308 10 655 186 26 0 chr2 49213366 49213479 -204043104 + FLAM_A SINE Alu 1 116 -17 758 112 0 0 chr2 49213586 49213684 -204042899 - AluS SINE Alu -213 99 2 1901 142 0 3 chr2 49213687 49213982 -204042601 - AluSx SINE Alu -18 294 1 1359 163 0 9 chr2 49213993 49214220 -204042363 - AluJb SINE Alu 0 312 88 839 152 0 0 chr2 49214225 49214363 -204042220 + L1MB3 LINE L1 6016 6153 -30 312 125 0 5 chr2 49214363 49214424 -204042159 - MLT2B1 LTR ERVL 0 464 424 22 0 0 0 chr2 49214471 49214493 -204042090 + AT_rich Low_complexity Low_complexity 1 22 0 1929 106 4 0 chr2 49214508 49214773 -204041810 + AluSp SINE Alu 1 266 -47 1120 92 23 0 chr2 49214778 49214952 -204041631 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 1255 195 45 112 chr2 49214952 49215326 -204041257 - MLT2B1 LTR ERVL -65 349 1 181 308 196 23 chr2 49215355 49215488 -204041095 - MIR3 SINE MIR -15 193 38 185 313 60 15 chr2 49215902 49215969 -204040614 + L2 LINE L2 3140 3209 -63 1719 152 12 46 chr2 49216651 49216974 -204039609 + AluJb SINE Alu 1 312 0 911 183 148 80 chr2 49217090 49217437 -204039146 + LTR37A LTR ERV1 35 454 -14 262 91 0 0 chr2 49217450 49217483 -204039100 - Alu SINE Alu -13 289 257 965 126 14 0 chr2 49217583 49217755 -204038828 + AluSg/x SINE Alu 136 309 0 1011 155 0 41 chr2 49217755 49217949 -204038634 - L1MB4 LINE L1 -172 6008 5823 1473 133 34 9 chr2 49217953 49218186 -204038397 - AluJb SINE Alu -13 299 61 1085 159 17 29 chr2 49218186 49218431 -204038152 - L1MB4 LINE L1 -541 5630 5387 324 26 0 0 chr2 49218437 49218475 -204038108 - tRNA-Val-GTG tRNA tRNA -38 38 1 2019 174 23 37 chr2 49218475 49218789 -204037794 - L1M3 LINE L1 -737 5443 5126 1826 189 0 0 chr2 49218789 49219102 -204037481 - AluSq SINE Alu 0 313 1 2019 174 23 37 chr2 49219102 49219202 -204037381 - L1M3 LINE L1 -1054 5126 5026 1646 196 0 10 chr2 49219202 49219372 -204037211 - AluJo SINE Alu -9 303 136 2202 118 0 0 chr2 49219372 49219678 -204036905 - AluSx SINE Alu -6 306 1 1646 196 0 10 chr2 49219678 49219813 -204036770 - AluJo SINE Alu -176 136 1 2019 174 23 37 chr2 49219813 49219954 -204036629 - L1M3 LINE L1 -1154 5026 4903 785 266 145 48 chr2 49219975 49220276 -204036307 - MLT1J LTR MaLR -3 508 145 2363 184 104 2 chr2 49220276 49220738 -204035845 + LTR22 LTR ERVK 1 509 0 785 266 145 48 chr2 49220738 49220899 -204035684 - MLT1J LTR MaLR -366 145 1 254 309 0 0 chr2 49220941 49221025 -204035558 + MIR SINE MIR 179 262 0 1602 163 0 31 chr2 49222484 49222613 -204033970 + AluJb SINE Alu 9 140 -169 2170 97 0 10 chr2 49222613 49222921 -204033662 + AluSq SINE Alu 1 305 -8 1602 163 0 31 chr2 49222921 49223101 -204033482 + AluJb SINE Alu 140 309 0 280 333 193 10 chr2 49223255 49223462 -204033121 - MIR SINE MIR -16 246 2 357 311 92 19 chr2 49223700 49223906 -204032677 + MLT1L LTR MaLR 8 228 -387 226 273 219 29 chr2 49223946 49224151 -204032432 + MLT1K LTR MaLR 328 571 -17 552 272 95 109 chr2 49224369 49224707 -204031876 - L2 LINE L2 0 3272 2940 200 364 15 23 chr2 49224718 49224850 -204031733 + L2 LINE L2 2576 2706 -608 793 190 11 6 chr2 49224889 49225068 -204031515 + CT-rich Low_complexity Low_complexity 1 180 0 545 278 224 9 chr2 49225076 49225093 -204031490 + L2 LINE L2 2751 2763 -509 2010 139 0 0 chr2 49225093 49225394 -204031189 - AluSx SINE Alu -11 301 1 545 278 224 9 chr2 49225394 49225799 -204030784 + L2 LINE L2 2763 3263 -9 1949 107 7 33 chr2 49226026 49226325 -204030258 + AluSx SINE Alu 1 291 -21 353 164 0 0 chr2 49227268 49227323 -204029260 - MER45A DNA AcHobo -24 154 100 302 186 271 0 chr2 49227409 49227479 -204029104 - MER45A DNA AcHobo -89 89 1 1963 112 3 20 chr2 49227512 49227808 -204028775 + AluSx SINE Alu 14 304 -8 241 231 62 31 chr2 49227920 49227985 -204028598 - MER39 LTR ERV1 0 707 641 416 147 0 0 chr2 49228088 49228156 -204028427 - MER41B LTR ERV1 -567 68 1 576 175 17 17 chr2 49228500 49228620 -204027963 - MER39 LTR ERV1 0 707 588 359 225 42 49 chr2 49228753 49228895 -204027688 - MER65A LTR ERV1 -304 141 1 651 142 104 0 chr2 49228895 49229001 -204027582 - MER39 LTR ERV1 -590 117 1 1044 160 90 97 chr2 49229053 49229205 -204027378 - AluJo SINE Alu -21 291 140 2078 129 0 16 chr2 49229205 49229516 -204027067 - AluSx SINE Alu -2 310 5 1044 160 90 97 chr2 49229516 49229651 -204026932 - AluJo SINE Alu -172 140 6 1000 229 28 133 chr2 49230368 49230972 -204025611 - MER34 LTR ERV1 0 542 2 1327 119 5 0 chr2 49231087 49231280 -204025303 - AluSg/x SINE Alu -20 292 99 2778 105 51 7 chr2 49231280 49231691 -204024892 - MLT2A1 LTR ERVL 0 444 16 519 147 0 0 chr2 49231692 49231767 -204024816 - AluS SINE Alu -236 76 2 2002 218 80 26 chr2 49231799 49232335 -204024248 - MER74B LTR ERVL 0 622 58 2079 99 0 0 chr2 49232375 49232684 -204023899 - AluY SINE Alu 0 310 2 26 0 0 0 chr2 49233002 49233028 -204023555 + AT_rich Low_complexity Low_complexity 1 26 0 804 164 8 0 chr2 49233512 49233634 -204022949 + AluSq/x SINE Alu 2 124 -188 2213 108 0 9 chr2 49233692 49234007 -204022576 - AluSx SINE Alu 0 312 1 879 175 6 6 chr2 49234009 49234175 -204022408 - FRAM SINE Alu -18 158 1 24 0 0 0 chr2 49234736 49234760 -204021823 + AT_rich Low_complexity Low_complexity 1 24 0 802 105 0 0 chr2 49234817 49234922 -204021661 + AluY SINE Alu 1 105 -206 487 267 84 58 chr2 49235423 49235648 -204020935 + MIR SINE MIR 20 250 -12 273 296 113 21 chr2 49235992 49236134 -204020449 + L2 LINE L2 2152 2306 -1008 229 291 12 35 chr2 49236332 49236418 -204020165 + MER34 LTR ERV1 50 133 -409 276 218 46 46 chr2 49236777 49236864 -204019719 + MER34 LTR ERV1 450 536 -6 2228 115 0 10 chr2 49236908 49237086 -204019497 - AluSc SINE Alu 0 309 134 2312 109 3 3 chr2 49237086 49237397 -204019186 - AluSp SINE Alu -2 311 1 2228 115 0 10 chr2 49237397 49237530 -204019053 - AluSc SINE Alu -175 134 1 572 306 151 26 chr2 49237555 49237905 -204018678 + L2 LINE L2 2920 3313 0 202 246 180 0 chr2 49238292 49238353 -204018230 - MIR3 SINE MIR 0 208 137 832 191 0 0 chr2 49238374 49238500 -204018083 - FLAM_C SINE Alu -17 126 1 245 355 37 0 chr2 49238504 49238611 -204017972 - MIR SINE MIR -118 144 34 3261 171 49 30 chr2 49238630 49239289 -204017294 + LTR51 LTR ERV1 1 671 0 284 257 147 81 chr2 49239549 49239776 -204016807 + MIR SINE MIR 15 255 -7 2012 141 0 3 chr2 49239940 49240223 -204016360 - AluSx SINE Alu -20 292 11 1383 101 0 0 chr2 49240373 49240552 -204016031 - AluSg/x SINE Alu 0 312 134 2243 101 0 10 chr2 49240552 49240849 -204015734 - AluSc SINE Alu -15 294 1 303 198 73 21 chr2 49241326 49241422 -204015161 + MER34 LTR ERV1 438 538 -4 893 156 32 0 chr2 49241500 49241654 -204014929 - MER41B LTR ERV1 0 635 477 299 289 270 13 chr2 49241976 49242128 -204014455 - MIR SINE MIR -70 192 2 2323 105 3 0 chr2 49242704 49243000 -204013583 - AluSx SINE Alu -15 297 1 443 247 28 90 chr2 49243440 49243618 -204012965 + MIR3 SINE MIR 6 172 -36 * 694 305 49 16 chr2 49243593 49243780 -204012803 + MIR SINE MIR 8 206 -56 1864 115 96 0 chr2 49243780 49244041 -204012542 + AluSg SINE Alu 1 286 -24 694 305 49 16 chr2 49244041 49244099 -204012484 + MIR SINE MIR 206 261 -1 461 97 32 70 chr2 49244117 49244303 -204012280 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 254 56 60 91 chr2 49244306 49244564 -204012019 + (TA)n Simple_repeat Simple_repeat 1 249 0 26 0 0 0 chr2 49244609 49244635 -204011948 + AT_rich Low_complexity Low_complexity 1 26 0 297 265 15 15 chr2 49244801 49244869 -204011714 + MER91A DNA MER1_type 36 103 -93 428 227 29 165 chr2 49245565 49245696 -204010887 - MER102a DNA MER1_type -1091 326 249 2328 111 3 0 chr2 49245696 49246002 -204010581 + AluSg SINE Alu 1 307 -3 428 227 29 165 chr2 49246002 49246143 -204010440 - MER102a DNA MER1_type -1168 249 91 248 221 168 42 chr2 49246870 49246965 -204009618 - MIR SINE MIR -109 153 47 2542 78 3 0 chr2 49246988 49247297 -204009286 - AluSp SINE Alu -3 310 1 1686 188 20 13 chr2 49247718 49248022 -204008561 - AluJb SINE Alu -4 308 3 324 0 0 0 chr2 49248762 49248798 -204007785 + (CAGG)n Simple_repeat Simple_repeat 1 36 0 2186 112 10 7 chr2 49248871 49249167 -204007416 + AluSx SINE Alu 1 297 -15 907 226 0 37 chr2 49249738 49249802 -204006781 - MER3 DNA MER1_type 0 209 144 2294 106 0 10 chr2 49249802 49250105 -204006478 + AluSx SINE Alu 1 300 -12 2276 103 13 0 chr2 49250105 49250406 -204006177 + AluSp SINE Alu 1 305 -8 907 226 0 37 chr2 49250406 49250557 -204006026 - MER3 DNA MER1_type -63 146 1 835 280 43 13 chr2 49250975 49251005 -204005578 + MIR SINE MIR 3 31 -231 2047 166 0 6 chr2 49251005 49251319 -204005264 + AluJb SINE Alu 1 312 0 835 280 43 13 chr2 49251319 49251520 -204005063 + MIR SINE MIR 31 241 -21 2029 148 0 19 chr2 49252122 49252424 -204004159 + AluSx SINE Alu 1 298 -14 432 0 0 0 chr2 49252424 49252472 -204004111 + (CA)n Simple_repeat Simple_repeat 1 48 0 2029 148 0 19 chr2 49252472 49252486 -204004097 + AluSx SINE Alu 298 311 -1 221 275 22 66 chr2 49253034 49253125 -204003458 + MIR3 SINE MIR 90 176 -32 297 286 97 65 chr2 49254323 49254613 -204001970 - L2 LINE L2 0 3313 3015 396 0 0 0 chr2 49254613 49254657 -204001926 + (TG)n Simple_repeat Simple_repeat 2 45 0 2018 145 0 40 chr2 49254837 49255162 -204001421 + AluJb SINE Alu 1 312 0 315 269 7 94 chr2 49255379 49255518 -204001065 - MIR SINE MIR -62 146 17 243 0 0 0 chr2 49255640 49255667 -204000916 + (TTA)n Simple_repeat Simple_repeat 3 29 0 399 290 57 8 chr2 49256264 49256388 -204000195 + MIR SINE MIR 113 242 -20 2269 90 17 0 chr2 49256880 49257179 -203999404 + AluSg SINE Alu 4 307 -3 1064 192 87 0 chr2 49257183 49257232 -203999351 + AluJo SINE Alu 72 115 -197 509 0 16 0 chr2 49257232 49257293 -203999290 + (TAAA)n Simple_repeat Simple_repeat 2 63 0 1064 192 87 0 chr2 49257293 49257451 -203999132 + AluJo SINE Alu 115 297 -15 738 164 9 0 chr2 49257452 49257568 -203999015 + FLAM_C SINE Alu 2 118 -25 249 33 0 0 chr2 49257586 49257616 -203998967 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 189 0 0 0 chr2 49258402 49258423 -203998160 + (TGAA)n Simple_repeat Simple_repeat 3 23 0 223 227 0 0 chr2 49258664 49258708 -203997875 + L2 LINE L2 3265 3308 -5 2582 147 54 63 chr2 49259109 49259203 -203997380 - MER34B LTR ERV1 0 565 472 2509 88 0 0 chr2 49259203 49259510 -203997073 + AluSq SINE Alu 1 307 -6 2582 147 54 63 chr2 49259510 49259973 -203996610 - MER34B LTR ERV1 -93 472 13 480 204 53 0 chr2 49260251 49260364 -203996219 - FLAM_C SINE Alu 0 143 25 1580 243 73 51 chr2 49261824 49262140 -203994443 + L2 LINE L2 2691 2999 -314 778 160 0 8 chr2 49262140 49262271 -203994312 + FLAM_C SINE Alu 1 130 -3 1580 243 73 51 chr2 49262271 49262548 -203994035 + L2 LINE L2 2999 3313 0 423 319 58 33 chr2 49262748 49262991 -203993592 - L2 LINE L2 -264 3008 2762 2011 142 13 3 chr2 49263523 49263832 -203992751 - AluSx SINE Alu 0 312 1 206 347 17 29 chr2 49263843 49264016 -203992567 + CT-rich Low_complexity Low_complexity 5 175 0 234 140 35 0 chr2 49264053 49264110 -203992473 - LTR37A LTR ERV1 0 426 368 1783 170 3 3 chr2 49264110 49264399 -203992184 + AluJb SINE Alu 1 289 -23 517 172 11 0 chr2 49314419 49314506 -203942077 + MER41E LTR ERV1 425 512 0 27 0 0 0 chr2 49314522 49314549 -203942034 + AT_rich Low_complexity Low_complexity 1 27 0 2102 112 0 0 chr2 49314549 49314843 -203941740 + AluSq SINE Alu 1 294 -19 1160 110 0 0 chr2 49314846 49315010 -203941573 + AluSp SINE Alu 141 304 -9 1579 134 102 14 chr2 49315013 49315151 -203941432 - AluSx SINE Alu -13 299 174 2048 113 0 3 chr2 49315151 49315442 -203941141 - AluSg SINE Alu -20 290 1 1579 134 102 14 chr2 49315442 49315578 -203941005 - AluSx SINE Alu -138 174 1 1604 160 26 13 chr2 49315610 49315917 -203940666 + AluJb SINE Alu 1 311 -1 1966 67 56 4 chr2 49315980 49316277 -203940306 + AluY SINE Alu 1 311 0 1292 202 58 7 chr2 49316506 49316649 -203939934 - AluJo SINE Alu -21 291 157 1820 161 0 13 chr2 49316649 49316954 -203939629 - AluJb SINE Alu -8 304 4 1292 202 58 7 chr2 49316954 49317087 -203939496 - AluJo SINE Alu -155 157 1 1883 139 16 7 chr2 49317169 49317478 -203939105 + AluSx SINE Alu 1 312 0 293 257 135 0 chr2 49317550 49317624 -203938959 + MIR SINE MIR 16 99 -163 2009 92 56 0 chr2 49317659 49317943 -203938640 - AluSg SINE Alu -6 304 5 236 284 30 149 chr2 49317945 49318013 -203938570 + MER5B DNA MER1_type 1 75 -103 2237 92 0 13 chr2 49318013 49318345 -203938238 + AluSp SINE Alu 1 313 0 1870 107 31 17 chr2 49318353 49318643 -203937940 + AluSc SINE Alu 1 294 -15 236 284 30 149 chr2 49318643 49318766 -203937817 + MER5B DNA MER1_type 82 177 -1 2410 68 0 10 chr2 49318808 49319117 -203937466 - AluSx SINE Alu -6 306 1 2079 101 3 0 chr2 49319185 49319481 -203937102 - AluSx SINE Alu -15 297 1 671 166 25 37 chr2 49319546 49319709 -203936874 - AluJo SINE Alu -31 281 121 1398 139 166 8 chr2 49319714 49319973 -203936610 - AluJb SINE Alu -2 300 1 478 214 83 36 chr2 49319983 49320151 -203936432 + L2 LINE L2 3138 3313 0 419 279 25 8 chr2 49321467 49321589 -203934994 + MIR SINE MIR 2 125 -137 2187 113 0 0 chr2 49322272 49322574 -203934009 - AluSx SINE Alu -10 302 1 986 93 0 0 chr2 49322604 49322733 -203933850 + AluY SINE Alu 1 129 -182 2242 72 0 0 chr2 49322733 49323012 -203933571 + AluY SINE Alu 27 305 -6 599 176 88 16 chr2 49323043 49323168 -203933415 + AluJo SINE Alu 3 136 -176 298 275 101 28 chr2 49323192 49323301 -203933282 + L2 LINE L2 3197 3313 0 2039 95 47 89 chr2 49323349 49323678 -203932905 + THE1B LTR MaLR 1 313 -51 2063 88 0 0 chr2 49323678 49323950 -203932633 - AluSc SINE Alu -13 296 25 2039 95 47 89 chr2 49323950 49324000 -203932583 + THE1B LTR MaLR 313 364 0 11894 96 6 0 chr2 49324000 49325571 -203931012 + THE1B-int LTR MaLR 1 1580 0 2086 128 82 20 chr2 49325571 49325914 -203930669 + THE1B LTR MaLR 1 364 0 1150 186 0 42 chr2 49326283 49326519 -203930064 + AluJb SINE Alu 1 226 -86 533 184 0 0 chr2 49326522 49326609 -203929974 + FLAM_C SINE Alu 36 122 -21 283 86 0 52 chr2 49326634 49326692 -203929891 + (GGGGA)n Simple_repeat Simple_repeat 4 58 0 1011 107 0 0 chr2 49326773 49326904 -203929679 - AluSq/x SINE Alu -182 131 1 1959 101 7 0 chr2 49326910 49327228 -203929355 - AluSc SINE Alu 0 320 1 1927 128 14 3 chr2 49327272 49327568 -203929015 - AluSq SINE Alu -13 300 2 1964 110 3 23 chr2 49327577 49327876 -203928707 - AluSg SINE Alu -17 293 1 1911 116 7 33 chr2 49328034 49328336 -203928247 + AluSx SINE Alu 1 294 -18 27 49 0 0 chr2 49328750 49328791 -203927792 + AT_rich Low_complexity Low_complexity 1 41 0 2090 110 0 13 chr2 49328871 49329172 -203927411 - AluSp SINE Alu -16 297 1 360 231 179 0 chr2 49329172 49329328 -203927255 - L1ME3A LINE L1 -230 5940 5757 583 108 9 72 chr2 49329359 49329470 -203927113 - AluSx SINE Alu -6 304 201 1068 127 13 0 chr2 49329470 49329628 -203926955 - AluSx SINE Alu -152 160 1 306 169 15 0 chr2 49329629 49329694 -203926889 - L1ME3A LINE L1 -396 5766 5701 1161 126 11 5 chr2 49329715 49329906 -203926677 - AluSq SINE Alu 0 313 122 633 213 33 8 chr2 49329908 49330030 -203926553 - MLT1A1 LTR MaLR -72 293 169 917 118 7 0 chr2 49330030 49330166 -203926417 - AluSq SINE Alu -175 137 1 303 139 18 0 chr2 49330167 49330232 -203926351 - L1ME LINE L1 -398 5766 5701 243 0 0 0 chr2 49330584 49330611 -203925972 + (A)n Simple_repeat Simple_repeat 1 27 0 1438 141 126 30 chr2 49330771 49331040 -203925543 - AluSq SINE Alu -18 295 1 1282 209 60 14 chr2 49331043 49331325 -203925258 - AluJo SINE Alu -6 296 2 819 184 23 40 chr2 49331347 49331521 -203925062 - FAM SINE Alu 0 175 5 1642 130 105 0 chr2 49331620 49331896 -203924687 - AluSq SINE Alu -8 305 1 1613 169 14 3 chr2 49331949 49332244 -203924339 + AluJo SINE Alu 1 298 -14 22 80 0 0 chr2 49332756 49332806 -203923777 + AT_rich Low_complexity Low_complexity 1 50 0 518 263 72 0 chr2 49332838 49332990 -203923593 + MIR SINE MIR 82 244 -18 1608 194 0 16 chr2 49333263 49333572 -203923011 + AluJo SINE Alu 1 304 -8 1593 166 7 24 chr2 49333576 49333872 -203922711 + AluJo SINE Alu 1 291 -21 1748 145 11 0 chr2 49333878 49334154 -203922429 + AluSx SINE Alu 1 279 -33 183 42 0 0 chr2 49334156 49334180 -203922403 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 674 164 25 0 chr2 49334234 49334356 -203922227 + L1MA4 LINE L1 6173 6297 -3 742 147 28 42 chr2 49335171 49335235 -203921348 - FLAM_C SINE Alu -170 142 79 2037 96 7 3 chr2 49335235 49335527 -203921056 - AluSp SINE Alu -20 293 1 742 147 28 42 chr2 49335527 49335605 -203920978 - FLAM_C SINE Alu -233 79 2 616 218 21 35 chr2 49335763 49335905 -203920678 - FLAM_C SINE Alu 0 143 4 2163 116 0 0 chr2 49336049 49336341 -203920242 - AluSx SINE Alu -20 292 1 480 150 87 94 chr2 49336362 49336489 -203920094 + FLAM_A SINE Alu 5 130 -3 2062 104 3 7 chr2 49336795 49337102 -203919481 - AluSg SINE Alu -4 306 1 300 111 0 0 chr2 49337578 49337623 -203918960 + (CCTA)n Simple_repeat Simple_repeat 1 45 0 917 159 0 0 chr2 49337643 49337781 -203918802 - AluJb SINE Alu -174 138 1 309 138 138 0 chr2 49337867 49337925 -203918658 + AluSx SINE Alu 1 66 -237 311 79 0 0 chr2 49337927 49337965 -203918618 - Alu SINE Alu -242 57 20 1668 109 4 4 chr2 49337965 49338195 -203918388 + AluSx SINE Alu 66 295 -17 2359 82 0 3 chr2 49338629 49338933 -203917650 - AluY SINE Alu -8 303 1 2322 112 0 0 chr2 49338977 49339280 -203917303 - AluSq SINE Alu -10 303 1 1886 110 33 37 chr2 49339589 49339753 -203916830 - AluSg SINE Alu -12 298 134 2017 90 6 64 chr2 49339753 49340064 -203916519 - AluSx SINE Alu -19 293 1 1886 110 33 37 chr2 49340064 49340198 -203916385 - AluSg SINE Alu -176 134 1 748 170 107 6 chr2 49340292 49340451 -203916132 + AluSp SINE Alu 134 308 -5 301 278 71 82 chr2 49340865 49341120 -203915463 - L1ME4a LINE L1 -86 6035 5784 2454 56 0 20 chr2 49341371 49341675 -203914908 - AluY SINE Alu -13 298 1 1452 69 0 0 chr2 49341679 49341852 -203914731 - AluY SINE Alu -8 303 131 1801 97 48 19 chr2 49341852 49342120 -203914463 - AluSc SINE Alu -33 276 1 218 246 72 14 chr2 49342241 49342310 -203914273 - MER5A DNA MER1_type -110 79 7 924 196 125 0 chr2 49342715 49342899 -203913684 + MER20 DNA MER1_type 8 214 -5 1466 51 0 6 chr2 49343047 49343222 -203913361 + AluY SINE Alu 1 174 -137 841 179 70 74 chr2 49343498 49343601 -203912982 - MER112 DNA MER1_type 0 256 154 1928 106 6 61 chr2 49343601 49343913 -203912670 + AluSc SINE Alu 14 308 -1 841 179 70 74 chr2 49343913 49344066 -203912517 - MER112 DNA MER1_type -102 154 1 2230 108 0 19 chr2 49344530 49344844 -203911739 - AluSg SINE Alu -2 308 1 2213 116 3 0 chr2 49344858 49345159 -203911424 - AluSp SINE Alu -10 303 2 26 74 0 0 chr2 49345220 49345274 -203911309 + AT_rich Low_complexity Low_complexity 1 54 0 2075 117 38 0 chr2 49345589 49345880 -203910703 - AluSx SINE Alu -10 302 1 23 0 0 0 chr2 49346857 49346880 -203909703 + AT_rich Low_complexity Low_complexity 1 23 0 1882 113 58 7 chr2 49347217 49347492 -203909091 + AluSc SINE Alu 19 307 -2 2288 88 3 7 chr2 49347504 49347801 -203908782 + AluSp SINE Alu 1 296 -17 315 0 0 0 chr2 49347931 49347966 -203908617 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6853 60 5 35 chr2 49347966 49349238 -203907345 - SVA Other Other -520 1369 433 6052 74 25 12 chr2 49349255 49350107 -203906476 - SVA Other Other -520 866 4 2226 106 6 3 chr2 49350679 49350991 -203905592 - AluSp SINE Alu 0 313 1 2387 90 0 13 chr2 49351047 49351357 -203905226 - AluSg SINE Alu -4 306 1 2016 125 10 7 chr2 49351523 49351820 -203904763 - AluSx SINE Alu -11 301 4 1358 128 29 0 chr2 49351918 49352122 -203904461 - AluSg/x SINE Alu -18 294 85 315 0 0 0 chr2 49352955 49352990 -203903593 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1503 150 82 29 chr2 49353230 49353510 -203903073 - AluJb SINE Alu -17 295 1 319 318 155 38 chr2 49353797 49354061 -203902522 + L2 LINE L2 2806 3100 -172 2372 70 0 13 chr2 49354747 49355047 -203901536 + AluY SINE Alu 12 307 -4 1338 175 26 55 chr2 49355243 49355551 -203901032 - AluJb SINE Alu -11 301 3 647 181 0 0 chr2 49355710 49355815 -203900768 - FLAM_A SINE Alu -1 141 37 2081 97 10 29 chr2 49355826 49356136 -203900447 - AluSg SINE Alu -6 304 1 1989 141 0 3 chr2 49356340 49356638 -203899945 - AluSx SINE Alu -15 297 1 980 199 65 14 chr2 49356641 49356857 -203899726 - L1PB4 LINE L1 0 6156 5930 1798 156 7 3 chr2 49356863 49357169 -203899414 - AluSx SINE Alu 0 307 1 2058 114 35 0 chr2 49357254 49357543 -203899040 - AluSg SINE Alu -11 299 1 228 36 0 0 chr2 49357545 49357573 -203899010 - L1PB4 LINE L1 -325 5826 5799 256 175 0 18 chr2 49357573 49357630 -203898953 + LTR66 LTR ERVL 383 438 -172 234 174 0 0 chr2 49357663 49357709 -203898874 + LTR66 LTR ERVL 394 439 -171 306 244 12 23 chr2 49357730 49357816 -203898767 + L1MC4 LINE L1 6619 6703 -1339 191 114 29 0 chr2 49357821 49357856 -203898727 + (TATG)n Simple_repeat Simple_repeat 2 37 0 254 249 44 0 chr2 49357858 49357971 -203898612 + L1MC4 LINE L1 1995 6982 -1340 238 247 99 0 chr2 49357937 49358018 -203898565 - L1MC4 LINE L1 -1340 6702 6614 * 3798 89 28 10 chr2 49358017 49358644 -203897939 - L1P5 LINE L1 -360 5791 5162 316 93 0 0 chr2 49358644 49358687 -203897896 - Alu SINE Alu -9 291 249 * 618 188 0 8 chr2 49358684 49358801 -203897782 - Charlie4 DNA MER1_type -1784 177 62 379 241 29 29 chr2 49359273 49359410 -203897173 - Tigger1 DNA MER2_type -1314 1104 968 390 300 167 0 chr2 49360048 49360258 -203896325 - MIR SINE MIR -15 247 3 1988 161 0 10 chr2 49360304 49360615 -203895968 - AluSx SINE Alu -4 308 1 1385 209 13 32 chr2 49361566 49361881 -203894702 - AluJo SINE Alu -3 309 1 1935 125 54 0 chr2 49362247 49362543 -203894040 - AluSq SINE Alu -1 312 1 2364 86 3 0 chr2 49362701 49363004 -203893579 - AluSp SINE Alu -1 312 9 1632 204 11 0 chr2 49363017 49363297 -203893286 - AluJo SINE Alu -29 283 1 2202 131 0 0 chr2 49363311 49363623 -203892960 - AluSp SINE Alu -1 312 1 2322 119 3 0 chr2 49364270 49364581 -203892002 + AluSx SINE Alu 1 312 0 523 257 125 7 chr2 49364675 49364827 -203891756 - MER5A DNA MER1_type -7 182 13 2231 117 0 13 chr2 49364859 49365175 -203891408 - AluSx SINE Alu 0 312 1 22 0 0 0 chr2 49365580 49365602 -203890981 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr2 49365740 49365770 -203890813 + AT_rich Low_complexity Low_complexity 1 30 0 2026 131 3 13 chr2 49365770 49365906 -203890677 + AluSx SINE Alu 1 137 -175 2481 80 0 0 chr2 49365906 49366217 -203890366 + AluY SINE Alu 1 311 0 2026 131 3 13 chr2 49366217 49366378 -203890205 + AluSx SINE Alu 137 295 -17 773 247 97 99 chr2 49366475 49366664 -203889919 - MER34B LTR ERV1 -1 564 376 2942 90 0 3 chr2 49366664 49367029 -203889554 - THE1B LTR MaLR 0 364 1 773 247 97 99 chr2 49367029 49367397 -203889186 - MER34B LTR ERV1 -189 376 8 2373 97 0 0 chr2 49367741 49368050 -203888533 - AluY SINE Alu -2 309 1 2412 88 0 3 chr2 49369682 49369990 -203886593 + AluY SINE Alu 1 307 -4 6345 39 11 0 chr2 49370223 49370977 -203885606 - L1PA5 LINE L1 0 6154 5393 8701 121 28 6 chr2 49371031 49372304 -203884279 - HSMAR2 DNA Mariner 0 1302 2 264 250 0 0 chr2 49372313 49372377 -203884206 - HAL1b LINE L1 -57 1291 1228 1828 187 50 21 chr2 49372500 49372811 -203883772 - L1MB7 LINE L1 -43 6141 5816 2576 119 77 15 chr2 49372811 49373213 -203883370 - MSTA LTR MaLR 0 428 2 1828 187 50 21 chr2 49373213 49373281 -203883302 - L1MB7 LINE L1 -368 5816 5751 1606 164 0 15 chr2 49373282 49373551 -203883032 - AluJo SINE Alu -32 280 16 305 287 107 73 chr2 49373838 49374073 -203882510 - L1MEc LINE L1 -3707 2508 2258 2342 85 0 0 chr2 49374073 49374368 -203882215 - AluSx SINE Alu -17 295 1 305 287 107 73 chr2 49374368 49374449 -203882134 - L1MEc LINE L1 -3957 2258 2181 843 161 0 0 chr2 49374521 49374639 -203881944 - FLAM_C SINE Alu -15 118 1 269 261 0 0 chr2 49375031 49375100 -203881483 - L1MEc LINE L1 -4724 1672 1604 2219 104 13 3 chr2 49375103 49375401 -203881182 - AluSq SINE Alu -11 302 2 391 322 76 38 chr2 49376054 49376371 -203880212 - L1MC4a LINE L1 -1976 5832 5504 22 0 0 0 chr2 49376378 49376400 -203880183 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr2 49376653 49376677 -203879906 + AT_rich Low_complexity Low_complexity 1 24 0 2266 63 12 75 chr2 49377095 49377426 -203879157 - AluY SINE Alu -1 310 1 1065 97 6 17 chr2 49377434 49377610 -203878973 + (TTTTC)n Simple_repeat Simple_repeat 4 177 0 1838 148 4 0 chr2 49377613 49377883 -203878700 - AluSx SINE Alu -36 276 6 275 241 0 0 chr2 49379243 49379301 -203877282 - MIR3 SINE MIR -52 156 99 1914 172 0 10 chr2 49379462 49379764 -203876819 + AluJb SINE Alu 1 299 -13 1416 171 58 55 chr2 49379773 49380066 -203876517 + AluJb SINE Alu 1 294 -18 26 74 0 0 chr2 49380168 49380222 -203876361 + AT_rich Low_complexity Low_complexity 1 54 0 261 372 35 18 chr2 49380268 49380381 -203876202 + MIR3 SINE MIR 9 123 -85 4806 116 1 13 chr2 49380981 49381653 -203874930 - MER4A LTR ERV1 0 664 1 245 247 24 12 chr2 49382443 49382524 -203874059 - L1MC4a LINE L1 -1179 4967 4881 2375 58 41 0 chr2 49382680 49382973 -203873610 - AluY SINE Alu -6 305 1 2077 142 0 7 chr2 49382978 49383280 -203873303 - AluSx SINE Alu -12 300 1 41 0 0 0 chr2 49383505 49383546 -203873037 + AT_rich Low_complexity Low_complexity 1 41 0 237 317 65 24 chr2 49383703 49383826 -203872757 - MIR SINE MIR -18 244 117 1537 160 59 7 chr2 49384489 49384776 -203871807 - AluJb SINE Alu -10 302 1 2007 145 0 3 chr2 49384840 49385136 -203871447 + AluSx SINE Alu 1 295 -17 2264 85 0 10 chr2 49385138 49385432 -203871151 + AluY SINE Alu 1 291 -20 2012 116 25 0 chr2 49385542 49385826 -203870757 - AluSp SINE Alu -2 311 21 2204 92 0 57 chr2 49385870 49386187 -203870396 - AluSp SINE Alu -14 299 1 21 0 0 0 chr2 49386461 49386482 -203870101 + AT_rich Low_complexity Low_complexity 1 21 0 1045 246 119 32 chr2 49387205 49387668 -203868915 + L1MC4 LINE L1 7352 7854 -188 21 0 0 0 chr2 49387946 49387967 -203868616 + AT_rich Low_complexity Low_complexity 1 21 0 1828 158 0 17 chr2 49388107 49388399 -203868184 + AluJo SINE Alu 1 287 -25 1365 191 46 40 chr2 49388519 49388822 -203867761 - AluJo SINE Alu -7 305 1 2462 103 0 0 chr2 49388979 49389291 -203867292 + AluSx SINE Alu 1 312 0 1567 151 35 56 chr2 49389993 49390312 -203866271 - AluSx SINE Alu 0 312 1 183 42 0 0 chr2 49390844 49390868 -203865715 + (T)n Simple_repeat Simple_repeat 1 24 0 809 136 0 36 chr2 49392659 49392799 -203863784 - FLAM_C SINE Alu -1 142 8 256 268 54 89 chr2 49393143 49393311 -203863272 - L1ME LINE L1 -568 5553 5392 470 60 0 15 chr2 49393396 49393463 -203863120 + (TCCC)n Simple_repeat Simple_repeat 1 66 0 864 113 73 0 chr2 49393509 49393633 -203862950 - FLAM_C SINE Alu 0 133 1 2187 68 29 0 chr2 49394287 49394566 -203862017 - AluSx SINE Alu -25 287 1 341 188 22 55 chr2 49395550 49395731 -203860852 + CT-rich Low_complexity Low_complexity 6 180 0 * 617 200 6 28 chr2 49395693 49395873 -203860710 + C-rich Low_complexity Low_complexity 3 178 0 2129 73 0 20 chr2 49397012 49397337 -203859246 - AluY SINE Alu 0 311 1 180 0 0 0 chr2 49397338 49397358 -203859225 + (T)n Simple_repeat Simple_repeat 1 20 0 325 176 165 12 chr2 49397809 49397894 -203858689 - MIR SINE MIR -89 173 76 454 84 0 14 chr2 49398133 49398204 -203858379 + FLAM_A SINE Alu 72 141 -1 200 316 15 73 chr2 49398916 49399052 -203857531 - MER5B DNA MER1_type -16 162 35 394 200 60 50 chr2 49399137 49399237 -203857346 + L1MA10 LINE L1 4886 4986 -1160 1233 161 63 20 chr2 49399239 49399493 -203857090 + AluJb SINE Alu 35 299 -13 240 269 146 18 chr2 49399564 49399735 -203856848 + L1ME3A LINE L1 5040 5232 -914 648 163 148 15 chr2 49399741 49399876 -203856707 + AluJo SINE Alu 122 274 -38 3140 199 105 13 chr2 49399911 49400745 -203855838 + L1MA10 LINE L1 5270 6334 0 418 280 71 0 chr2 49400747 49400915 -203855668 + L1ME3A LINE L1 5340 5519 -643 391 233 147 17 chr2 49400926 49401191 -203855392 + L1ME3A LINE L1 5577 5942 -228 1888 67 43 0 chr2 49403846 49404099 -203852484 + AluY SINE Alu 1 264 -47 701 154 26 0 chr2 49404224 49404341 -203852242 - MIR SINE MIR -110 152 33 346 180 150 30 chr2 49405013 49405113 -203851470 + MIR3 SINE MIR 46 157 -51 2260 97 7 0 chr2 49405832 49406142 -203850441 - AluSx SINE Alu 0 312 1 370 266 157 71 chr2 49406166 49406433 -203850150 + HAL1 LINE L1 1830 2119 -388 1133 127 0 0 chr2 49406434 49406607 -203849976 - AluSg/x SINE Alu -11 301 129 2696 26 0 0 chr2 49406613 49406924 -203849659 - AluYa5 SINE Alu 0 311 1 1303 127 71 64 chr2 49406996 49407279 -203849304 + AluJo SINE Alu 11 295 -17 530 204 125 40 chr2 49407322 49407498 -203849085 + HAL1 LINE L1 2281 2471 -36 805 185 67 31 chr2 49407787 49407982 -203848601 + L1MB8 LINE L1 5977 6178 0 230 128 128 0 chr2 49408019 49408058 -203848525 + LTR3 LTR ERVK 1 44 -388 1356 89 6 0 chr2 49408060 49408240 -203848343 + LTR3 LTR ERVK 252 432 0 296 244 122 0 chr2 49408246 49408328 -203848255 - MIR SINE MIR -85 177 86 969 231 96 51 chr2 49408344 49408677 -203847906 - MLT1J LTR MaLR -68 443 96 220 253 13 51 chr2 49410565 49410644 -203845939 - MIR3 SINE MIR -9 199 124 1773 212 63 63 chr2 49411239 49411743 -203844840 - MER21B LTR ERV1 -125 738 235 925 209 0 5 chr2 49411747 49411938 -203844645 + AluJo SINE Alu 6 195 -117 752 237 9 99 chr2 49411953 49412185 -203844398 - MER21B LTR ERV1 -639 224 14 185 188 0 104 chr2 49412580 49412628 -203843955 + MIR SINE MIR 111 153 -109 225 254 0 0 chr2 49412654 49412709 -203843874 - MLT1K LTR MaLR -2 586 532 1233 114 0 0 chr2 49412901 49413076 -203843507 - AluSg/x SINE Alu -4 308 134 2161 100 0 10 chr2 49413076 49413375 -203843208 - AluSx SINE Alu -16 296 1 1588 198 118 27 chr2 49413510 49413949 -203842634 + MER31A LTR ERV1 7 485 0 1936 141 13 3 chr2 49413962 49414268 -203842315 + AluJo SINE Alu 1 309 -3 1916 148 3 3 chr2 49414334 49414624 -203841959 - AluSx SINE Alu -22 290 1 251 358 0 0 chr2 49414636 49414731 -203841852 + MIR SINE MIR 162 256 -6 274 314 118 20 chr2 49414802 49414955 -203841628 + MER91A DNA MER1_type 29 196 0 2739 159 12 50 chr2 49415170 49415687 -203840896 + LOR1a LTR ERV1 1 497 0 192 343 38 38 chr2 49415913 49416018 -203840565 - MIR SINE MIR -69 139 35 945 148 19 0 chr2 49416147 49416309 -203840274 - AluJb SINE Alu -14 298 134 2128 118 3 10 chr2 49416309 49416622 -203839961 - AluSx SINE Alu -1 311 1 1929 145 0 0 chr2 49416624 49416928 -203839655 - AluSx SINE Alu -8 304 1 243 338 0 0 chr2 49416931 49416999 -203839584 - MIR SINE MIR -83 125 58 1398 95 0 0 chr2 49417915 49418239 -203838344 + (TGGA)n Simple_repeat Simple_repeat 1 324 0 494 243 46 20 chr2 49418316 49418468 -203838115 - MIR SINE MIR -30 232 77 1510 210 17 74 chr2 49420459 49420811 -203835772 + MER77 LTR ERV1 1 332 -273 248 241 19 0 chr2 49420815 49420869 -203835714 + Tigger5 DNA MER2_type 1 55 -2268 * 292 212 106 0 chr2 49420838 49420904 -203835679 + Tigger5 DNA MER2_type 2251 2323 0 1543 178 12 0 chr2 49420919 49421161 -203835422 + MER77 LTR ERV1 359 603 -2 269 325 24 24 chr2 49421513 49421639 -203834944 - MIR SINE MIR -48 214 89 498 179 21 21 chr2 49421747 49421842 -203834741 - MLT1I LTR MaLR 0 409 315 964 113 6 6 chr2 49422521 49422680 -203833903 + (TC)n Simple_repeat Simple_repeat 2 160 0 1927 148 3 0 chr2 49422703 49423008 -203833575 + AluSx SINE Alu 5 310 -2 1569 169 7 14 chr2 49423010 49423294 -203833289 - AluJo SINE Alu -30 282 1 235 232 130 0 chr2 49424092 49424161 -203832422 - MLT1K LTR MaLR -4 584 507 271 311 48 10 chr2 49424435 49424538 -203832045 + LTR67 LTR ERVL 96 202 -355 244 194 65 0 chr2 49425225 49425287 -203831296 + LTR67 LTR ERVL 491 556 -1 638 277 68 55 chr2 49425554 49425951 -203830632 + MLT1J LTR MaLR 110 511 0 275 245 66 38 chr2 49426546 49426652 -203829931 + L2 LINE L2 3205 3313 0 1001 197 56 0 chr2 49427315 49427513 -203829070 + MER3 DNA MER1_type 1 209 0 267 250 95 69 chr2 49428212 49428328 -203828255 + LTR33A LTR ERVL 40 158 -365 319 280 43 0 chr2 49428520 49428613 -203827970 + MLT1J LTR MaLR 110 206 -305 773 297 183 35 chr2 49428791 49429977 -203826606 + L2 LINE L2 1866 3231 -41 224 314 162 0 chr2 49429984 49430089 -203826494 + MIR SINE MIR 92 213 -49 1902 158 0 3 chr2 49430137 49430448 -203826135 - AluJb SINE Alu -2 310 1 199 339 18 0 chr2 49430568 49430624 -203825959 - L3b LINE CR1 -5 1578 1522 320 272 86 56 chr2 49430794 49430870 -203825713 - MER112 DNA MER1_type -6 254 182 814 117 86 0 chr2 49430870 49430998 -203825585 - MER85 DNA T2_type 0 139 1 320 272 86 56 chr2 49430998 49431083 -203825500 - MER112 DNA MER1_type -78 182 88 308 243 115 36 chr2 49431536 49431697 -203824886 - MIR SINE MIR -58 150 10 393 273 73 42 chr2 49431725 49431890 -203824693 + MER5B DNA MER1_type 6 175 -3 180 219 0 0 chr2 49433108 49433149 -203823434 + (TATG)n Simple_repeat Simple_repeat 1 41 0 219 292 204 9 chr2 49433992 49434105 -203822478 + L3b LINE CR1 1317 1451 -132 204 233 0 0 chr2 49434818 49434861 -203821722 + (TG)n Simple_repeat Simple_repeat 2 44 0 258 277 139 10 chr2 49437907 49438008 -203818575 - Charlie1 DNA MER1_type -2607 154 41 814 168 35 29 chr2 49438021 49438194 -203818389 - AluJo SINE Alu -19 293 120 187 274 39 0 chr2 49438302 49438353 -203818230 - MER5A DNA MER1_type -93 96 44 741 223 50 0 chr2 49439845 49440047 -203816536 + L1ME3 LINE L1 5739 5950 -220 443 242 83 47 chr2 49440078 49440284 -203816299 + L1ME3 LINE L1 5926 6137 -25 180 0 0 0 chr2 49441625 49441645 -203814938 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2220 100 6 37 chr2 49441649 49441970 -203814613 + AluY SINE Alu 1 311 0 2237 115 0 16 chr2 49441986 49442300 -203814283 + AluSx SINE Alu 1 309 -3 427 292 82 15 chr2 49442476 49442671 -203813912 - MIR SINE MIR -54 208 1 345 238 48 48 chr2 49443360 49443465 -203813118 - L2 LINE L2 0 3272 3168 194 331 81 0 chr2 49444447 49444583 -203812000 - MIR SINE MIR -70 192 46 576 171 19 0 chr2 49444695 49444800 -203811783 + MER94 DNA DNA 23 129 -5 253 209 105 105 chr2 49444800 49444905 -203811678 + MER5A DNA MER1_type 63 167 -22 287 231 70 0 chr2 49445126 49445213 -203811370 + MLT1L LTR MaLR 136 232 -356 926 114 49 22 chr2 49445332 49445516 -203811067 - MER53 DNA DNA 0 189 1 409 218 20 30 chr2 49446061 49446162 -203810421 - MIR SINE MIR -1 261 162 643 216 41 18 chr2 49446170 49446341 -203810242 + MER104 DNA Tc2 6 180 0 326 175 40 135 chr2 49446341 49446467 -203810116 - MIR SINE MIR -101 161 48 353 258 10 10 chr2 49446547 49446644 -203809939 + MER5B DNA MER1_type 1 97 -81 2169 132 0 0 chr2 49446727 49447022 -203809561 + AluJo SINE Alu 1 295 -17 225 197 132 40 chr2 49447391 49447467 -203809116 + MER51C LTR ERV1 347 429 -211 611 107 0 48 chr2 49447508 49447611 -203808972 + AluSg/x SINE Alu 208 305 -7 549 183 92 33 chr2 49447612 49447765 -203808818 - L2 LINE L2 0 3313 3152 425 213 12 0 chr2 49447800 49447880 -203808703 + MER51A LTR ERV1 470 550 -84 1182 133 0 22 chr2 49447882 49448062 -203808521 - FRAM SINE Alu 0 176 1 522 198 0 16 chr2 49448069 49448190 -203808393 + MER51C LTR ERV1 522 640 0 281 332 25 40 chr2 49448437 49448542 -203808041 + MIR SINE MIR 49 151 -111 2346 98 7 0 chr2 49448542 49448847 -203807736 - AluSx SINE Alu -5 307 1 281 332 25 40 chr2 49448847 49448943 -203807640 + MIR SINE MIR 151 247 -15 242 297 188 8 chr2 49451115 49451243 -203805340 - MIR SINE MIR -13 249 99 251 257 89 50 chr2 49451423 49451524 -203805059 - MIR SINE MIR -73 135 31 198 275 25 25 chr2 49452043 49452123 -203804460 - L2 LINE L2 -5 3267 3188 2384 202 27 29 chr2 49452127 49452687 -203803896 - MER90 LTR ERV1 -16 559 1 2458 76 0 3 chr2 49452864 49453165 -203803418 - AluSc SINE Alu -9 300 1 1053 225 112 41 chr2 49453628 49453993 -203802590 - L2 LINE L2 -3 3310 2920 2142 116 0 0 chr2 49454025 49454293 -203802290 + AluSx SINE Alu 1 268 -44 275 377 0 0 chr2 49454623 49454729 -203801854 - MIR SINE MIR -62 200 95 202 264 139 0 chr2 49454921 49454993 -203801590 - L2 LINE L2 -613 2701 2620 474 315 114 5 chr2 49455445 49455664 -203800919 + MIR SINE MIR 4 246 -16 1781 162 14 0 chr2 49456180 49456309 -203800274 + AluJb SINE Alu 1 127 -185 243 0 0 0 chr2 49456309 49456336 -203800247 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1781 162 14 0 chr2 49456336 49456484 -203800099 + AluJb SINE Alu 127 282 -30 202 367 58 25 chr2 49456945 49457065 -203799518 + L3b LINE CR1 1430 1553 -30 2070 175 14 5 chr2 49457066 49457437 -203799146 + MLT1B LTR MaLR 1 374 -16 240 35 0 0 chr2 49457515 49457544 -203799039 + (CAG)n Simple_repeat Simple_repeat 2 30 0 1024 178 6 0 chr2 49458456 49458630 -203797953 - FAM SINE Alu 0 175 1 272 285 106 22 chr2 49458896 49459033 -203797550 - MIR SINE MIR -62 146 46 677 286 20 15 chr2 49461102 49461305 -203795278 + MIR SINE MIR 19 222 -40 1342 151 0 10 chr2 49461996 49462202 -203794381 + AluJb SINE Alu 86 289 -23 280 362 47 8 chr2 49462211 49462338 -203794245 + HAL1 LINE L1 1 132 -2375 548 214 34 8 chr2 49462563 49462680 -203793903 + HAL1 LINE L1 757 876 -1631 641 224 35 29 chr2 49462790 49462964 -203793619 - MER5B DNA MER1_type -2 176 2 843 131 0 36 chr2 49462977 49463114 -203793469 - FRAM SINE Alu -14 162 31 1516 142 0 0 chr2 49463127 49463362 -203793221 - AluSg/x SINE Alu 0 305 71 191 188 0 0 chr2 49463372 49463404 -203793179 + MER5B DNA MER1_type 2 33 -145 2025 105 147 8 chr2 49463404 49463757 -203792826 + MSTA LTR MaLR 1 402 -26 1212 237 14 42 chr2 49463784 49464143 -203792440 + L2 LINE L2 2206 2554 -760 2798 275 63 53 chr2 49464143 49465190 -203791393 + L1MEc LINE L1 36 1072 -5324 2474 86 0 0 chr2 49465190 49465491 -203791092 + AluSg SINE Alu 1 301 -9 2798 275 63 53 chr2 49465491 49465915 -203790668 + L1MEc LINE L1 1072 1524 -4872 2528 86 0 0 chr2 49465915 49466219 -203790364 - AluSx SINE Alu -8 304 1 2798 275 63 53 chr2 49466219 49466279 -203790304 + L1MEc LINE L1 1524 1582 -4814 1514 217 55 80 chr2 49466339 49467112 -203789471 + L2 LINE L2 2541 3313 0 2162 140 0 0 chr2 49468032 49468332 -203788251 + AluSx SINE Alu 11 310 -2 254 181 0 0 chr2 49468962 49469010 -203787573 - Alu SINE Alu -24 278 241 280 279 54 39 chr2 49469176 49469305 -203787278 + L2 LINE L2 2685 2815 -499 371 319 35 0 chr2 49469526 49469667 -203786916 - MIR SINE MIR 0 262 117 1467 289 83 48 chr2 49469696 49470748 -203785835 - L2 LINE L2 -44 3269 2201 827 243 111 77 chr2 49470755 49471276 -203785307 + MER34B LTR ERV1 1 542 0 2012 292 175 21 chr2 49471308 49472561 -203784022 - L2 LINE L2 -1171 2143 698 1316 212 65 41 chr2 49472651 49473038 -203783545 + MSTD LTR MaLR 1 396 0 377 349 20 13 chr2 49473648 49473800 -203782783 - L2 LINE L2 -3 3269 3117 233 273 0 0 chr2 49474989 49475044 -203781539 - L2 LINE L2 -1 3312 3258 189 308 39 26 chr2 49475182 49475260 -203781323 - MIR SINE MIR 0 262 184 271 252 94 44 chr2 49475365 49475524 -203781059 - L2 LINE L2 -246 3026 2860 382 232 99 51 chr2 49476072 49476275 -203780308 + MIR SINE MIR 18 232 -30 480 298 55 60 chr2 49477178 49477413 -203779170 - MIR SINE MIR -27 235 2 543 293 39 6 chr2 49477450 49477631 -203778952 - MIR3 SINE MIR -15 193 7 377 261 194 0 chr2 49477637 49477771 -203778812 + MER5A DNA MER1_type 30 189 0 191 59 0 29 chr2 49478881 49478915 -203777668 + (TG)n Simple_repeat Simple_repeat 1 33 0 198 191 206 0 chr2 49479028 49479091 -203777492 + MIR SINE MIR 71 146 -62 407 266 100 31 chr2 49479850 49480109 -203776474 + L1ME4a LINE L1 5612 5888 -233 269 304 120 0 chr2 49480231 49480323 -203776260 - L2 LINE L2 -2 3311 3209 1518 211 3 11 chr2 49480432 49480716 -203775867 + AluJo SINE Alu 11 292 -20 204 125 0 0 chr2 49481958 49481990 -203774593 + (CA)n Simple_repeat Simple_repeat 2 33 0 207 297 40 0 chr2 49482349 49482423 -203774160 + MIR SINE MIR 47 123 -85 203 291 0 38 chr2 49484496 49484575 -203772008 + G-rich Low_complexity Low_complexity 2 77 0 282 179 26 26 chr2 49485782 49485860 -203770723 + (CGG)n Simple_repeat Simple_repeat 1 78 0 28 29 0 0 chr2 49485881 49485916 -203770667 + GC_rich Low_complexity Low_complexity 1 35 0 22 56 0 0 chr2 49486195 49486231 -203770352 + GC_rich Low_complexity Low_complexity 1 36 0 402 100 0 0 chr2 49489439 49489499 -203767084 + (CA)n Simple_repeat Simple_repeat 1 60 0 2858 147 31 16 chr2 49489550 49490095 -203766488 + L1MB8 LINE L1 5626 6178 0 2274 109 0 28 chr2 49490106 49490426 -203766157 + AluY SINE Alu 1 311 0 2695 46 0 0 chr2 49490486 49490790 -203765793 + AluY SINE Alu 1 304 -7 749 272 5 0 chr2 49491795 49492001 -203764582 - L1M4 LINE L1 -3538 2608 2402 298 262 0 0 chr2 49492002 49492063 -203764520 + Tigger5 DNA MER2_type 2 62 -2261 * 596 175 0 8 chr2 49492058 49492178 -203764405 + Tigger5 DNA MER2_type 2059 2177 -146 670 179 30 60 chr2 49492356 49492388 -203764195 - L1M4 LINE L1 -3743 2403 2372 1447 176 145 0 chr2 49492388 49492643 -203763940 - AluJo SINE Alu -10 292 1 670 179 30 60 chr2 49492643 49492811 -203763772 - L1M4 LINE L1 -3774 2372 2209 190 267 0 0 chr2 49492887 49492932 -203763651 - L2 LINE L2 -12 3301 3257 450 0 0 0 chr2 49492937 49492987 -203763596 + (TG)n Simple_repeat Simple_repeat 1 50 0 212 360 54 29 chr2 49493111 49493350 -203763233 - L2 LINE L2 -181 3091 2847 302 244 23 83 chr2 49494097 49494363 -203762220 - L1ME4a LINE L1 -11 6110 5861 362 224 13 0 chr2 49494375 49494451 -203762132 - L2 LINE L2 -5 3308 3232 714 234 114 91 chr2 49494668 49495019 -203761564 + MLT1J LTR MaLR 8 366 -145 219 139 0 0 chr2 49495930 49495966 -203760617 + (TCCC)n Simple_repeat Simple_repeat 2 37 0 2049 78 0 4 chr2 49495976 49496244 -203760339 - AluY SINE Alu -1 310 44 214 236 109 0 chr2 49496244 49496299 -203760284 - MIR SINE MIR -18 244 184 259 312 165 6 chr2 49497076 49497246 -203759337 - L2 LINE L2 0 3313 3117 185 258 169 45 chr2 49497433 49497464 -203759119 - L2 LINE L2 -493 2821 2795 4181 89 5 0 chr2 49497464 49498015 -203758568 - MER41A LTR ERV1 0 554 1 185 258 169 45 chr2 49498015 49498072 -203758511 - L2 LINE L2 -519 2795 2722 904 167 73 29 chr2 49498192 49498396 -203758187 - LTR7 LTR ERV1 0 450 238 918 118 8 18 chr2 49498542 49498710 -203757873 - LTR7 LTR ERV1 -232 218 1 39590 155 18 36 chr2 49498710 49506600 -203749983 - HERVH LTR ERV1 0 7713 1 958 162 69 25 chr2 49506600 49506804 -203749779 - LTR7 LTR ERV1 0 450 238 928 108 21 13 chr2 49507018 49507183 -203749400 - LTR7 LTR ERV1 -232 218 1 3409 144 0 19 chr2 49507613 49508154 -203748429 - LTR26B LTR ERV1 0 531 1 1353 168 66 31 chr2 49508300 49508608 -203747975 + L1MB7 LINE L1 5848 6184 0 1481 179 69 18 chr2 49508608 49509067 -203747516 + LTR54 LTR ERV1 1 496 -2 1005 192 67 36 chr2 49510126 49510161 -203746422 - MIR SINE MIR -6 256 224 3654 86 4 6 chr2 49510161 49510648 -203745935 + LTR19A LTR ERV1 1 486 0 1005 192 67 36 chr2 49510648 49510836 -203745747 - MIR SINE MIR -38 224 26 711 12 0 0 chr2 49511209 49511289 -203745294 - LTR26B LTR ERV1 -451 80 1 600 264 157 59 chr2 49512434 49512790 -203743793 + MLT1K LTR MaLR 70 460 -128 2100 153 16 16 chr2 49512827 49513153 -203743430 - L1MB5 LINE L1 -33 6141 5813 3043 122 7 0 chr2 49513153 49513578 -203743005 - MSTA LTR MaLR 0 428 1 2100 153 16 16 chr2 49513578 49513616 -203742967 - L1MB5 LINE L1 -360 5814 5777 377 162 29 0 chr2 49513616 49513684 -203742899 - AluJ/FRAM SINE Alu -5 297 228 776 157 0 8 chr2 49513704 49513825 -203742758 - FLAM_C SINE Alu -18 125 6 1266 167 0 0 chr2 49513831 49514041 -203742542 - L1MB5 LINE L1 -388 5786 5577 2171 132 52 9 chr2 49514476 49514825 -203741758 + MLT1A1 LTR MaLR 1 364 -1 329 358 22 0 chr2 49514839 49514973 -203741610 + MIR3 SINE MIR 27 163 -45 194 302 0 16 chr2 49515047 49515110 -203741473 - MIR3 SINE MIR -3 205 144 243 0 0 0 chr2 49515453 49515480 -203741103 + (CA)n Simple_repeat Simple_repeat 2 28 0 2727 161 68 45 chr2 49517612 49517682 -203738901 - L1MB8 LINE L1 0 6178 6111 2086 131 0 3 chr2 49517682 49517994 -203738589 + AluSq SINE Alu 3 313 0 2727 161 68 45 chr2 49517994 49518501 -203738082 - L1MB8 LINE L1 -67 6111 5588 21 36 0 0 chr2 49518515 49518543 -203738040 + AT_rich Low_complexity Low_complexity 1 28 0 329 236 14 0 chr2 49518646 49518718 -203737865 - L2 LINE L2 -3 3310 3238 281 232 18 0 chr2 49518751 49518807 -203737776 - L2 LINE L2 -521 2793 2737 575 195 58 32 chr2 49518809 49518826 -203737757 - L1MA10 LINE L1 0 6334 6318 2075 221 185 48 chr2 49518826 49519605 -203736978 - L1ME2 LINE L1 -9 6155 5270 2312 84 3 0 chr2 49519733 49520032 -203736551 + AluSp SINE Alu 2 301 -12 295 232 110 24 chr2 49520267 49520349 -203736234 - MER39 LTR ERV1 0 684 497 740 258 98 64 chr2 49520352 49520807 -203735776 - MER39 LTR ERV1 -58 643 1 2007 147 0 6 chr2 49521242 49521554 -203735029 + AluSx SINE Alu 1 310 -2 210 309 148 0 chr2 49521652 49521814 -203734769 + L2 LINE L2 2865 3050 -222 223 366 62 0 chr2 49522086 49522198 -203734385 - MIR SINE MIR -68 140 22 182 227 76 15 chr2 49522248 49522314 -203734269 - MIR SINE MIR -125 137 68 1281 209 11 28 chr2 49522359 49522641 -203733942 - L1MB5 LINE L1 -23 6151 5875 2220 98 0 3 chr2 49523753 49524060 -203732523 - AluSg SINE Alu -4 306 1 835 158 40 0 chr2 49524516 49524668 -203731915 - FRAM SINE Alu -10 166 9 1991 117 0 3 chr2 49525379 49525681 -203730902 + AluSx SINE Alu 1 301 0 25 51 0 0 chr2 49525703 49525742 -203730841 + AT_rich Low_complexity Low_complexity 1 39 0 235 188 0 21 chr2 49525896 49525951 -203730632 - MLT1H1 LTR MaLR -414 135 49 1550 287 114 8 chr2 49526134 49526667 -203729916 - MLT1G1 LTR MaLR -5 590 1 2130 107 7 0 chr2 49526933 49527232 -203729351 + AluSx SINE Alu 1 301 -11 1314 188 80 28 chr2 49527252 49527539 -203729044 + AluJo SINE Alu 1 302 0 325 326 39 0 chr2 49529006 49529135 -203727448 + MIR3 SINE MIR 29 162 -46 1448 154 0 0 chr2 49529180 49529401 -203727182 + AluSx SINE Alu 1 221 -91 1926 154 30 6 chr2 49530879 49531217 -203725366 + MSTA LTR MaLR 81 426 -2 435 261 147 82 chr2 49531233 49531260 -203725323 - L2 LINE L2 -583 2731 2707 1743 145 25 4 chr2 49531260 49531613 -203724970 - AluSx SINE Alu 0 359 1 435 261 147 82 chr2 49531613 49532094 -203724489 - L2 LINE L2 -607 2707 2189 659 133 133 9 chr2 49532175 49532288 -203724295 - FLAM_C SINE Alu -11 132 6 1103 237 62 33 chr2 49533010 49533159 -203723424 + MSTD LTR MaLR 1 144 -252 2183 104 7 0 chr2 49533159 49533466 -203723117 + AluSx SINE Alu 1 309 -3 1103 237 62 33 chr2 49533466 49533478 -203723105 + MSTD LTR MaLR 144 154 -242 2325 77 3 10 chr2 49533478 49533791 -203722792 + AluY SINE Alu 1 311 0 1103 237 62 33 chr2 49533791 49533932 -203722651 + MSTD LTR MaLR 154 313 -83 371 258 0 11 chr2 49533967 49534056 -203722527 - L2 LINE L2 -3 3310 3223 2128 131 3 0 chr2 49534056 49534368 -203722215 - AluSq SINE Alu 0 313 1 834 215 12 6 chr2 49534507 49534670 -203721913 - MSTD LTR MaLR 0 396 233 * 1412 226 31 33 chr2 49534664 49535023 -203721560 - MLT1F LTR MaLR -182 360 3 384 246 82 55 chr2 49535056 49535276 -203721307 - L2 LINE L2 -183 3089 2864 1851 156 0 0 chr2 49535554 49535849 -203720734 + AluSx SINE Alu 5 299 -13 455 318 67 77 chr2 49536852 49537317 -203719266 + L2 LINE L2 2812 3271 -1 2009 103 4 0 chr2 49537664 49537936 -203718647 - AluSq SINE Alu -12 301 29 1089 200 5 0 chr2 49538012 49538197 -203718386 - L1MC4a LINE L1 -1012 6796 6611 477 305 163 38 chr2 49538364 49538757 -203717826 - L1M4 LINE L1 -905 5241 4800 1350 257 132 56 chr2 49538757 49539188 -203717395 + L2 LINE L2 2035 2432 -882 2127 111 0 3 chr2 49539188 49539486 -203717097 - AluSq SINE Alu -16 297 1 1350 257 132 56 chr2 49539486 49539887 -203716696 + L2 LINE L2 2432 2930 -384 228 227 53 0 chr2 49539958 49540033 -203716550 - HsTC2 DNA Tc2 -151 1747 1669 246 147 0 0 chr2 49540033 49540067 -203716516 + Alu SINE Alu 2 35 -266 949 158 45 0 chr2 49540072 49540249 -203716334 + AluSg/x SINE Alu 113 297 -13 938 194 19 46 chr2 49540253 49540469 -203716114 - HsTC2 DNA Tc2 -209 1689 1304 351 249 189 0 chr2 49540486 49540580 -203716003 - HsTC2 DNA Tc2 -1754 144 22 180 0 0 0 chr2 49540580 49540600 -203715983 + (CAA)n Simple_repeat Simple_repeat 2 21 0 351 249 189 0 chr2 49540600 49540627 -203715956 - HsTC2 DNA Tc2 -1876 22 1 183 259 69 17 chr2 49541411 49541469 -203715114 - MER5A DNA MER1_type -6 183 123 1383 222 38 33 chr2 49541547 49541912 -203714671 - MLT1B LTR MaLR -22 368 2 265 267 8 67 chr2 49542557 49542677 -203713906 + L1MC4 LINE L1 7930 8042 0 4551 158 8 2 chr2 49542684 49543452 -203713131 + L1MA6 LINE L1 5297 6067 -233 4413 132 38 23 chr2 49543443 49544233 -203712350 + L1 LINE L1 4012 4813 -1333 * 1187 150 34 21 chr2 49544334 49544568 -203712015 + AluJo SINE Alu 63 299 -13 817 217 19 6 chr2 49544570 49544731 -203711852 - MLT1C LTR MaLR -302 165 3 1318 102 0 32 chr2 49544866 49545082 -203711501 - AluSx SINE Alu -99 213 5 398 325 247 9 chr2 49546027 49546480 -203710103 - L2 LINE L2 -1740 1574 1014 442 270 86 55 chr2 49547138 49547423 -203709160 + MLT1I LTR MaLR 69 359 -91 661 253 136 33 chr2 49547455 49547823 -203708760 - LTR16A LTR ERVL -51 406 1 279 191 43 64 chr2 49547823 49547899 -203708684 + MLT1J2 LTR MaLR 356 429 -21 784 194 80 11 chr2 49547993 49548168 -203708415 + MER5A DNA MER1_type 3 189 0 501 294 85 15 chr2 49548400 49548601 -203707982 + MIR SINE MIR 31 245 -17 1111 197 70 25 chr2 49548788 49549032 -203707551 + MLT1C LTR MaLR 213 467 0 644 262 31 11 chr2 49549769 49549945 -203706638 - MIR SINE MIR -58 150 11 321 294 184 0 chr2 49550460 49550596 -203705987 + L1ME4a LINE L1 5766 5926 -195 1998 105 7 29 chr2 49550897 49551203 -203705380 - AluSx SINE Alu -11 301 3 1688 96 20 0 chr2 49551224 49551475 -203705108 - L1MA6 LINE L1 0 6300 6045 6896 120 9 19 chr2 49551495 49552375 -203704208 - L1MA2 LINE L1 0 6304 5417 180 0 0 0 chr2 49552375 49552395 -203704188 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1783 100 46 43 chr2 49552395 49552675 -203703908 - AluSx SINE Alu -31 281 1 6896 120 9 19 chr2 49552675 49553316 -203703267 - L1MA2 LINE L1 -885 5419 4795 3488 189 10 28 chr2 49553597 49554320 -203702263 - HERVH LTR ERV1 -4988 2725 2016 2103 111 0 7 chr2 49554937 49555235 -203701348 + AluSx SINE Alu 1 296 -16 265 173 272 12 chr2 49555481 49555562 -203701021 + MIR3 SINE MIR 56 157 -51 186 43 0 0 chr2 49555615 49555638 -203700945 + (CA)n Simple_repeat Simple_repeat 2 24 0 993 190 15 30 chr2 49557808 49558008 -203698575 - MER3 DNA MER1_type -3 206 10 281 220 0 163 chr2 49558479 49558546 -203698037 + MER5A DNA MER1_type 16 50 -139 2027 77 91 0 chr2 49558546 49558832 -203697751 + AluSx SINE Alu 1 312 0 281 220 0 163 chr2 49558832 49558905 -203697678 + MER5A DNA MER1_type 50 133 -56 1550 194 72 81 chr2 49559267 49559791 -203696792 - MER39 LTR ERV1 -4 703 1 592 172 0 0 chr2 49560092 49560191 -203696392 - MER5A DNA MER1_type -8 181 83 259 250 81 73 chr2 49560107 49560243 -203696340 + MER5A DNA MER1_type 35 171 -18 * 327 49 0 0 chr2 49560556 49560597 -203695986 + (TG)n Simple_repeat Simple_repeat 1 41 0 438 322 89 0 chr2 49561251 49561431 -203695152 + L3 LINE CR1 1132 1327 -250 1985 246 39 25 chr2 49561484 49562078 -203694505 + L2 LINE L2 2149 2750 -564 261 146 24 0 chr2 49562078 49562119 -203694464 + Alu SINE Alu 1 42 -261 707 281 20 15 chr2 49563454 49563657 -203692926 + MIR SINE MIR 19 222 -40 1241 151 0 10 chr2 49564348 49564554 -203692029 + AluJb SINE Alu 86 289 -23 280 362 47 8 chr2 49564563 49564690 -203691893 + HAL1 LINE L1 1 132 -2375 554 222 34 8 chr2 49564915 49565032 -203691551 + HAL1 LINE L1 757 876 -1631 678 224 35 29 chr2 49565142 49565316 -203691267 - MER5B DNA MER1_type -2 176 2 813 137 0 36 chr2 49565327 49565466 -203691117 - FRAM SINE Alu -12 164 31 1403 142 0 0 chr2 49565479 49565714 -203690869 - AluSg/x SINE Alu 0 307 73 201 188 0 0 chr2 49565724 49565756 -203690827 + MER5B DNA MER1_type 2 33 -145 2142 105 147 8 chr2 49565756 49566109 -203690474 + MSTA LTR MaLR 1 402 -26 1282 237 14 42 chr2 49566136 49566495 -203690088 + L2 LINE L2 2206 2554 -760 2803 273 57 54 chr2 49566495 49567542 -203689041 + L1MEc LINE L1 36 1091 -5305 2315 86 0 0 chr2 49567542 49567843 -203688740 + AluSg SINE Alu 1 301 -9 2803 273 57 54 chr2 49567843 49568258 -203688325 + L1MEc LINE L1 1091 1503 -4893 2063 116 3 3 chr2 49568267 49568569 -203688014 - AluSg SINE Alu -8 302 1 1211 185 24 114 chr2 49568719 49569017 -203687566 + LTR37B LTR ERV1 3 238 -230 1882 140 0 7 chr2 49569017 49569310 -203687273 + AluSx SINE Alu 6 296 -16 1211 185 24 114 chr2 49569310 49569519 -203687064 + LTR37B LTR ERV1 238 464 -4 2959 106 7 9 chr2 49569659 49570083 -203686500 + MER34C LTR ERV1 37 459 -126 1499 71 0 76 chr2 49570084 49570308 -203686275 + LTR49 LTR ERV1 2 208 -387 3352 172 14 74 chr2 49570308 49570798 -203685785 - LTR8 LTR ERV1 0 691 258 2643 80 123 2 chr2 49570798 49571198 -203685385 + LTR7 LTR ERV1 1 448 -2 3352 172 14 74 chr2 49571198 49571440 -203685143 - LTR8 LTR ERV1 -433 258 3 4690 39 0 25 chr2 49571440 49572012 -203684571 + LTR6B LTR ERV1 1 558 0 1680 124 156 23 chr2 49572017 49572044 -203684539 + LTR49 LTR ERV1 204 226 -369 3510 84 132 120 chr2 49572044 49572362 -203684221 - LTR8A LTR ERV1 0 727 414 1955 125 6 13 chr2 49572362 49572674 -203683909 + AluSp SINE Alu 1 310 -3 3510 84 132 120 chr2 49572674 49573073 -203683510 - LTR8A LTR ERV1 -313 414 1 1680 124 156 23 chr2 49573073 49573391 -203683192 + LTR49 LTR ERV1 226 595 0 477 99 56 0 chr2 49573393 49573464 -203683119 + LTR49-int LTR ERV1 1 75 -6256 2721 94 9 83 chr2 49573464 49573561 -203683022 + MER61E LTR ERV1 1 104 -465 2055 85 13 30 chr2 49573561 49573866 -203682717 + AluY SINE Alu 1 300 -11 2721 94 9 83 chr2 49573866 49574203 -203682380 + MER61E LTR ERV1 104 403 -166 2321 185 10 71 chr2 49574203 49574611 -203681972 + LTR49-int LTR ERV1 2090 2463 -3868 2216 90 3 3 chr2 49574611 49574921 -203681662 - AluSg SINE Alu 0 310 1 2321 185 10 71 chr2 49574921 49575020 -203681563 + LTR49-int LTR ERV1 2463 2566 -3765 744 148 41 0 chr2 49575028 49575150 -203681433 - FLAM_C SINE Alu -14 129 3 852 191 0 12 chr2 49575150 49575312 -203681271 + LTR47B LTR ERVL 284 443 0 533 206 105 74 chr2 49575338 49575353 -203681230 + LOR1-int LTR ERV1 1210 1223 -3900 1935 107 43 4 chr2 49575353 49575633 -203680950 - AluSx SINE Alu -21 291 1 533 206 105 74 chr2 49575633 49575874 -203680709 + LOR1-int LTR ERV1 1223 1829 -3294 867 178 6 6 chr2 49575878 49576035 -203680548 - FRAM SINE Alu -19 157 1 665 201 0 49 chr2 49576103 49576247 -203680336 + FLAM_A SINE Alu 6 142 0 1050 147 6 0 chr2 49576318 49576481 -203680102 + AluJb SINE Alu 134 297 -15 1980 122 0 10 chr2 49576493 49576796 -203679787 + AluSx SINE Alu 12 311 -1 939 206 36 18 chr2 49576811 49577030 -203679553 + AluJb SINE Alu 88 310 -2 1103 143 62 39 chr2 49577100 49577358 -203679225 + LOR1-int LTR ERV1 4167 4430 -3690 1145 235 166 68 chr2 49578147 49578678 -203677905 + L2 LINE L2 1390 1972 -1342 2167 99 0 0 chr2 49578687 49578979 -203677604 - AluSx SINE Alu -12 300 9 2303 126 25 117 chr2 49578979 49579509 -203677074 - LTR24C LTR ERV1 -154 481 1 283 229 48 60 chr2 49579532 49579615 -203676968 - MER91C DNA MER1_type -28 112 31 462 289 176 11 chr2 49580230 49580417 -203676166 - MIR SINE MIR 0 262 45 390 129 0 0 chr2 49580814 49580876 -203675707 + (T)n Simple_repeat Simple_repeat 1 62 0 1313 144 0 23 chr2 49580898 49581113 -203675470 - AluJb SINE Alu -102 210 1 4593 143 14 6 chr2 49581192 49581908 -203674675 - MER72 LTR ERV1 0 722 1 226 347 67 0 chr2 49583032 49583107 -203673476 + L3b LINE CR1 1305 1384 -199 1617 181 0 20 chr2 49583343 49583647 -203672936 - AluJo SINE Alu -14 298 1 380 215 54 67 chr2 49583769 49583918 -203672665 - MLT1J LTR MaLR -49 462 316 270 176 59 59 chr2 49584060 49584128 -203672455 - MLT1J LTR MaLR -342 169 102 1399 167 48 167 chr2 49584130 49584672 -203671911 + LTR49-int LTR ERV1 4256 4861 -1470 784 152 8 23 chr2 49584672 49584804 -203671779 + AluJo/FLAM SINE Alu 2 131 -171 1960 113 20 7 chr2 49584806 49585108 -203671475 + AluSg SINE Alu 3 308 -2 1399 167 48 167 chr2 49585108 49585185 -203671398 + LTR49-int LTR ERV1 4719 4804 -1527 1810 117 4 0 chr2 49585287 49585551 -203671032 + AluSx SINE Alu 45 309 -3 226 258 99 92 chr2 49585794 49586077 -203670506 + LTR38 LTR ERV1 256 540 -16 1255 139 95 98 chr2 49586087 49586134 -203670449 + MER34C LTR ERV1 262 308 -277 1999 104 4 4 chr2 49586134 49586413 -203670170 + AluSq SINE Alu 16 294 -19 1255 139 95 98 chr2 49586413 49586682 -203669901 + MER34C LTR ERV1 308 577 -8 971 170 152 0 chr2 49586686 49586910 -203669673 + MER33 DNA MER1_type 2 259 -65 268 115 0 19 chr2 49586888 49586940 -203669643 - Alu SINE Alu 0 301 251 * 314 151 0 0 chr2 49586940 49586993 -203669590 + LTR24C LTR ERV1 429 481 -154 2162 105 0 0 chr2 49586993 49587288 -203669295 + AluSx SINE Alu 9 303 -9 1128 233 165 70 chr2 49587297 49587829 -203668754 - L2 LINE L2 -1342 1972 1390 2108 113 10 3 chr2 49588614 49588923 -203667660 - AluSx SINE Alu -1 311 1 1201 184 91 85 chr2 49589501 49589876 -203666707 - LTR8A LTR ERV1 0 727 351 1439 138 3 97 chr2 49589876 49590187 -203666396 + AluJo SINE Alu 1 282 -30 198 103 0 0 chr2 49590191 49590220 -203666363 + (GA)n Simple_repeat Simple_repeat 2 30 0 1838 184 22 77 chr2 49590247 49590413 -203666170 - MER31B LTR ERV1 -39 427 253 1973 99 53 0 chr2 49590413 49590695 -203665888 + AluSq SINE Alu 1 297 -16 1838 184 22 77 chr2 49590695 49590935 -203665648 - MER31B LTR ERV1 -213 253 46 2208 87 0 22 chr2 49590935 49591246 -203665337 + AluSx SINE Alu 3 306 -6 1838 184 22 77 chr2 49591246 49591290 -203665293 - MER31B LTR ERV1 -420 46 1 1203 178 42 0 chr2 49591291 49591527 -203665056 + L1MD1 LINE L1 5996 6241 -1 580 164 40 139 chr2 49591529 49591803 -203664780 - LTR37B LTR ERV1 -126 342 96 2247 93 0 13 chr2 49591868 49592180 -203664403 + AluY SINE Alu 1 308 -3 50 46 0 46 chr2 49592241 49592371 -203664212 + AT_rich Low_complexity Low_complexity 1 124 0 2276 84 7 0 chr2 49593106 49593414 -203663169 + AluY SINE Alu 1 310 -1 1059 209 94 4 chr2 49593769 49594046 -203662537 - LTR37A LTR ERV1 0 426 125 817 109 0 31 chr2 49594305 49594427 -203662156 + AluJo/FLAM SINE Alu 9 127 -180 1445 146 73 11 chr2 49594427 49594702 -203661881 - AluSx SINE Alu -20 292 1 22 0 0 0 chr2 49594708 49594730 -203661853 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr2 49594886 49594909 -203661674 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1264 138 0 5 chr2 49594912 49595101 -203661482 - AluJo SINE Alu -33 279 92 433 152 33 0 chr2 49595172 49595264 -203661319 - LTR37A LTR ERV1 0 426 332 489 173 25 0 chr2 49595264 49595345 -203661238 - AluJo SINE Alu -225 87 5 321 158 26 53 chr2 49595395 49595471 -203661112 - LTR41 LTR ERVL -6 767 694 1561 86 9 0 chr2 49595471 49595681 -203660902 + AluSq SINE Alu 1 212 -101 231 289 0 22 chr2 49595855 49595945 -203660638 + C-rich Low_complexity Low_complexity 1 88 0 2318 133 8 16 chr2 49596757 49597124 -203659459 + MLT1A1 LTR MaLR 1 364 -1 373 290 130 0 chr2 49597227 49597358 -203659225 + MIR SINE MIR 45 192 -70 1128 257 139 20 chr2 49597939 49598195 -203658388 - MLT1C LTR MaLR -10 457 233 2151 111 0 0 chr2 49598195 49598492 -203658091 - AluSx SINE Alu -12 300 4 1128 257 139 20 chr2 49598492 49598639 -203657944 - MLT1C LTR MaLR -234 233 6 180 0 0 0 chr2 49599245 49599265 -203657318 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 253 267 38 19 chr2 49599297 49599402 -203657181 - L1MC4a LINE L1 -1635 6173 6067 547 264 77 52 chr2 49599478 49599804 -203656779 - L1MC4a LINE L1 -1856 5952 5619 241 312 49 100 chr2 49600451 49600880 -203655703 - LTR67 LTR ERVL -46 511 105 196 122 0 73 chr2 49601563 49601604 -203654979 + L2 LINE L2 3255 3292 -21 1744 163 91 29 chr2 49601674 49602207 -203654376 - LTR18B LTR ERVL 0 614 1 190 167 375 0 chr2 49602404 49602476 -203654107 - MER5A DNA MER1_type -84 105 7 552 198 105 43 chr2 49602488 49602650 -203653933 - MER5B DNA MER1_type 0 178 7 450 256 51 7 chr2 49603342 49603479 -203653104 - MER103 DNA DNA -22 144 2 858 266 63 0 chr2 49603745 49603967 -203652616 + MIR SINE MIR 17 252 -10 1749 131 7 56 chr2 49604465 49604771 -203651812 - AluJo SINE Alu -21 291 1 241 286 9 76 chr2 49605569 49605674 -203650909 - MIR SINE MIR -71 137 40 425 252 54 43 chr2 49606012 49606417 -203650166 - LTR48 LTR ERV1 -141 646 1 1651 120 8 16 chr2 49607008 49607266 -203649317 - AluSx SINE Alu -11 301 46 881 136 35 61 chr2 49607567 49607765 -203648818 + MER31-int LTR ERV1 3544 3736 -2862 1236 206 66 39 chr2 49607838 49608380 -203648203 + MER31-int LTR ERV1 2478 2930 -2006 1136 151 0 0 chr2 49608390 49608569 -203648014 - AluJb SINE Alu 0 312 134 255 215 0 15 chr2 49608571 49608636 -203647947 + MER31-int LTR ERV1 2917 2980 -1956 948 237 74 63 chr2 49608713 49608935 -203647648 + MER31-int LTR ERV1 4294 4524 -1807 1613 166 18 18 chr2 49608935 49609285 -203647298 - AluSx SINE Alu 0 350 1 948 237 74 63 chr2 49609285 49609441 -203647142 + MER31-int LTR ERV1 4524 4677 -1654 1910 90 29 22 chr2 49609443 49609720 -203646863 + AluSx SINE Alu 3 281 -31 324 0 0 0 chr2 49609720 49609756 -203646827 + (CA)n Simple_repeat Simple_repeat 1 36 0 628 96 0 0 chr2 49609756 49609839 -203646744 - MER51B LTR ERV1 -294 83 1 1029 179 107 36 chr2 49609839 49610091 -203646492 + MER31-int LTR ERV1 599 868 -4068 280 229 108 0 chr2 49610141 49610224 -203646359 + MER67D LTR ERV1 120 211 -303 690 195 53 40 chr2 49610297 49610564 -203646019 + MER31-int LTR ERV1 891 1194 -3742 * 2700 203 50 48 chr2 49610533 49611219 -203645364 + MER31-int LTR ERV1 3625 4311 -625 322 89 0 0 chr2 49611219 49611264 -203645319 + MER57A LTR ERV1 1 45 -358 2207 110 0 0 chr2 49611741 49612050 -203644533 - AluSx SINE Alu -3 309 1 936 223 66 0 chr2 49612245 49612456 -203644127 - MIR SINE MIR -36 226 2 470 283 71 10 chr2 49612730 49612919 -203643664 - MIR SINE MIR -47 215 15 2515 56 0 0 chr2 49613028 49613331 -203643252 - AluY SINE Alu -8 303 1 1499 223 42 23 chr2 49613840 49614304 -203642279 + MER39 LTR ERV1 4 707 0 2238 85 3 3 chr2 49614336 49614630 -203641953 + AluSx SINE Alu 1 294 -18 310 320 78 41 chr2 49614631 49614875 -203641708 - L2 LINE L2 -14 3258 3006 491 271 193 62 chr2 49614878 49615113 -203641470 - L2 LINE L2 -2 3311 3108 2165 86 3 46 chr2 49615113 49615437 -203641146 + AluSg SINE Alu 1 310 0 491 271 193 62 chr2 49615437 49615574 -203641009 - L2 LINE L2 -205 3108 2890 310 263 181 34 chr2 49615695 49615900 -203640683 - L2 LINE L2 -444 2870 2636 229 128 43 43 chr2 49615905 49615952 -203640631 - LTR45 LTR ERV1 0 525 479 2347 64 0 7 chr2 49615955 49616250 -203640333 + AluY SINE Alu 2 294 -17 1101 182 14 9 chr2 49616259 49616499 -203640084 + AluJo SINE Alu 72 312 0 2456 156 31 7 chr2 49616499 49616923 -203639660 - LTR45 LTR ERV1 -41 484 51 570 173 29 0 chr2 49616949 49617053 -203639530 - L1ME LINE L1 -553 5613 5507 1837 229 70 10 chr2 49617053 49617564 -203639019 - LTR48B LTR ERV1 0 644 58 1402 159 0 64 chr2 49617568 49617731 -203638852 - AluJb SINE Alu -25 287 148 297 0 0 0 chr2 49617731 49617764 -203638819 + (TA)n Simple_repeat Simple_repeat 1 33 0 1402 159 0 64 chr2 49617764 49617883 -203638700 - AluJb SINE Alu -164 148 23 2616 149 34 42 chr2 49618058 49618747 -203637836 - LTR48B-int LTR ERV1 -156 6175 5447 2023 121 0 3 chr2 49618747 49619044 -203637539 - AluSx SINE Alu -16 296 1 2616 149 34 42 chr2 49619044 49619214 -203637369 - LTR48B-int LTR ERV1 -884 5447 5277 2002 117 7 10 chr2 49619495 49619795 -203636788 - AluSx SINE Alu -13 299 1 1671 111 28 0 chr2 49619838 49620090 -203636493 - MER34C LTR ERV1 -320 265 7 2085 98 3 3 chr2 49620725 49621022 -203635561 - AluY SINE Alu -14 297 1 682 232 18 4 chr2 49621107 49621296 -203635287 + MLT1A1 LTR MaLR 179 396 0 237 241 17 0 chr2 49621296 49621348 -203635235 - MLT1H LTR MaLR -43 506 454 1069 181 0 9 chr2 49621375 49621591 -203634992 - AluY SINE Alu -15 296 83 451 102 0 0 chr2 49621591 49621650 -203634933 - AluSg/x SINE Alu -62 247 189 917 117 0 7 chr2 49621652 49621789 -203634794 - AluJb SINE Alu -176 136 1 605 234 50 116 chr2 49621795 49622115 -203634468 - MLT1H LTR MaLR -143 406 108 196 224 0 41 chr2 49622190 49622239 -203634344 - L2 LINE L2 -37 3235 3189 2129 105 3 0 chr2 49622359 49622665 -203633918 + AluSx SINE Alu 1 307 -5 569 281 216 36 chr2 49622700 49622998 -203633585 - L2 LINE L2 -297 3016 2773 1656 159 41 0 chr2 49622998 49623293 -203633290 + AluJo SINE Alu 1 307 -5 1790 112 87 17 chr2 49623294 49623581 -203633002 + AluSq SINE Alu 1 307 -6 569 281 216 36 chr2 49623581 49623846 -203632737 - L2 LINE L2 -539 2774 2354 1356 173 0 0 chr2 49623852 49624078 -203632505 + AluJb SINE Alu 1 226 -86 1032 135 0 6 chr2 49624178 49624334 -203632249 - AluJo SINE Alu -66 246 92 433 152 33 0 chr2 49624405 49624497 -203632086 - LTR37A LTR ERV1 0 426 332 489 173 25 0 chr2 49624497 49624578 -203632005 - AluJo SINE Alu -225 87 5 330 126 11 230 chr2 49624628 49624704 -203631879 - LTR41 LTR ERVL -6 767 748 2134 118 0 6 chr2 49624704 49625019 -203631564 + AluSq SINE Alu 1 313 0 330 126 11 230 chr2 49625019 49625116 -203631467 - LTR41 LTR ERVL -25 748 632 1881 87 153 6 chr2 49625144 49625482 -203631101 + LTR7 LTR ERV1 3 450 0 1340 221 98 106 chr2 49625488 49626130 -203630453 - LTR41 LTR ERVL -136 637 1 1497 81 10 15 chr2 49626179 49626377 -203630206 - MER107 DNA MER1_type 0 197 1 2018 93 9 78 chr2 49626424 49626758 -203629825 + AluSx SINE Alu 1 311 -1 279 214 68 60 chr2 49627153 49627270 -203629313 - LTR49-int LTR ERV1 -3083 1853 1736 1575 161 21 31 chr2 49627316 49627607 -203628976 - AluJb SINE Alu -24 288 1 2228 103 10 0 chr2 49628460 49628770 -203627813 + AluSq SINE Alu 1 313 0 3713 123 74 30 chr2 49628772 49629503 -203627080 - LTR49-int LTR ERV1 -1495 4451 3292 977 193 36 22 chr2 49629574 49629797 -203626786 - AluJb SINE Alu -2 310 85 2058 131 0 6 chr2 49629807 49630120 -203626463 - AluSx SINE Alu -1 311 1 1050 147 6 0 chr2 49630124 49630287 -203626296 - AluJb SINE Alu -15 297 134 665 201 0 49 chr2 49630358 49630502 -203626081 - FLAM_A SINE Alu 0 142 6 867 178 6 6 chr2 49630570 49630727 -203625856 + FRAM SINE Alu 1 157 -19 533 206 105 74 chr2 49630731 49630972 -203625611 - LTR49-int LTR ERV1 -3294 1829 1597 1935 107 43 4 chr2 49630972 49631252 -203625331 + AluSx SINE Alu 1 291 -21 533 206 105 74 chr2 49631252 49631267 -203625316 - LTR49-int LTR ERV1 -3526 1597 1210 852 191 0 12 chr2 49631293 49631455 -203625128 - LTR47B LTR ERVL 0 443 284 744 148 41 0 chr2 49631455 49631577 -203625006 + FLAM_C SINE Alu 3 129 -14 2321 185 10 71 chr2 49631585 49631684 -203624899 - LTR49-int LTR ERV1 -3765 2566 2463 2251 91 3 0 chr2 49631684 49631993 -203624590 + AluSg SINE Alu 1 310 0 2321 185 10 71 chr2 49631993 49632401 -203624182 - LTR49-int LTR ERV1 -3868 2463 2090 2721 94 9 83 chr2 49632401 49632738 -203623845 - MER61E LTR ERV1 -166 403 104 2273 77 0 29 chr2 49632738 49633051 -203623532 - AluY SINE Alu -7 304 1 2721 94 9 83 chr2 49633051 49633148 -203623435 - MER61E LTR ERV1 -465 104 1 477 99 56 0 chr2 49633148 49633219 -203623364 - LTR49-int LTR ERV1 -6256 75 1 1889 109 149 23 chr2 49633221 49633541 -203623042 - LTR49 LTR ERV1 0 595 226 3552 83 131 120 chr2 49633541 49633940 -203622643 + LTR8A LTR ERV1 1 413 -314 1955 125 6 13 chr2 49633940 49634252 -203622331 - AluSp SINE Alu -3 310 1 3552 83 131 120 chr2 49634252 49634571 -203622012 + LTR8A LTR ERV1 413 727 0 1889 109 149 23 chr2 49634571 49634598 -203621985 - LTR49 LTR ERV1 -369 226 204 4690 39 0 25 chr2 49634603 49635175 -203621408 - LTR6B LTR ERV1 0 558 1 3352 172 14 74 chr2 49635175 49635417 -203621166 + LTR8 LTR ERV1 3 258 -433 2673 80 123 0 chr2 49635417 49635816 -203620767 - LTR7 LTR ERV1 -2 448 1 3352 172 14 74 chr2 49635816 49636306 -203620277 + LTR8 LTR ERV1 258 691 0 1499 71 0 76 chr2 49636306 49636530 -203620053 - LTR49 LTR ERV1 -387 208 2 2959 106 7 9 chr2 49636531 49636955 -203619628 - MER34C LTR ERV1 -126 459 37 1197 187 24 114 chr2 49637095 49637304 -203619279 - LTR37B LTR ERV1 -4 464 238 1882 140 0 7 chr2 49637304 49637597 -203618986 - AluSx SINE Alu -16 296 6 1197 187 24 114 chr2 49637597 49637895 -203618688 - LTR37B LTR ERV1 -230 238 3 690 209 31 0 chr2 49638046 49638175 -203618408 + FLAM_A SINE Alu 1 133 0 1314 124 212 39 chr2 49638221 49638480 -203618103 - AluSx SINE Alu -8 304 1 2404 61 0 0 chr2 49638649 49638946 -203617637 + AluY SINE Alu 1 297 -14 1671 111 28 0 chr2 49639579 49639831 -203616752 + MER34C LTR ERV1 7 265 -320 2002 117 7 10 chr2 49639874 49640174 -203616409 + AluSx SINE Alu 1 299 -13 2135 120 3 0 chr2 49640272 49640580 -203616003 + AluSx SINE Alu 1 309 -3 226 258 99 92 chr2 49640823 49641106 -203615477 + LTR38 LTR ERV1 256 540 -16 1241 142 95 98 chr2 49641116 49641163 -203615420 + MER34C LTR ERV1 262 308 -277 1999 104 4 4 chr2 49641163 49641442 -203615141 + AluSq SINE Alu 16 294 -19 1241 142 95 98 chr2 49641442 49641711 -203614872 + MER34C LTR ERV1 308 577 -8 1040 157 61 44 chr2 49641715 49641916 -203614667 + MER33 DNA MER1_type 2 209 -2376 1996 110 0 20 chr2 49641916 49642215 -203614368 - AluSx SINE Alu -9 303 11 1040 157 61 44 chr2 49642215 49642242 -203614341 + MER33 DNA MER1_type 209 234 -90 1840 141 0 17 chr2 49642244 49642535 -203614048 + AluSq SINE Alu 2 287 -26 257 106 277 0 chr2 49642864 49642911 -203613672 + L2 LINE L2 3232 3291 -22 402 207 0 0 chr2 49643315 49643402 -203613181 + MER33 DNA MER1_type 238 324 0 353 264 29 86 chr2 49643594 49643768 -203612815 + MIR3 SINE MIR 30 193 -15 1560 168 8 0 chr2 49643769 49644031 -203612552 - AluJb SINE Alu 0 312 49 1709 122 6 81 chr2 49644143 49644464 -203612119 + AluSx SINE Alu 1 297 -15 780 169 0 0 chr2 49644473 49644591 -203611992 + FLAM_C SINE Alu 1 118 -15 38 0 0 0 chr2 49644596 49644634 -203611949 + AT_rich Low_complexity Low_complexity 1 38 0 793 261 136 42 chr2 49644807 49645213 -203611370 - L2 LINE L2 -3 3269 2826 764 194 88 6 chr2 49646296 49646456 -203610127 + MLT1B LTR MaLR 1 173 -217 1621 169 11 7 chr2 49646459 49646738 -203609845 + AluJo SINE Alu 1 280 -32 574 245 8 118 chr2 49646772 49647017 -203609566 + MLT1B LTR MaLR 157 374 0 1677 178 21 3 chr2 49647066 49647352 -203609231 + MLT2B1 LTR ERVL 3 293 -227 225 374 107 8 chr2 49647945 49648076 -203608507 - L2 LINE L2 -33 3239 3096 508 186 118 0 chr2 49648235 49648337 -203608246 + MER21B LTR ERV1 327 440 -423 2082 132 0 0 chr2 49648450 49648753 -203607830 + AluJb SINE Alu 1 303 -9 1618 141 3 75 chr2 49648778 49649097 -203607486 + AluJo SINE Alu 1 296 -16 35 0 0 0 chr2 49649100 49649135 -203607448 + AT_rich Low_complexity Low_complexity 1 35 0 2001 112 28 0 chr2 49649232 49649519 -203607064 + AluSg SINE Alu 1 295 -15 1507 204 3 41 chr2 49649939 49650074 -203606509 + AluJo SINE Alu 1 140 -162 1898 109 13 35 chr2 49650074 49650385 -203606198 + AluSq SINE Alu 1 304 -9 1507 204 3 41 chr2 49650385 49650563 -203606020 + AluJo SINE Alu 140 302 0 578 251 29 17 chr2 49650571 49650746 -203605837 - LTR41 LTR ERVL -590 183 7 367 229 0 86 chr2 49650755 49650785 -203605798 + L1ME2 LINE L1 729 760 -5310 1941 107 69 3 chr2 49650785 49651076 -203605507 + AluSx SINE Alu 1 310 -2 367 229 0 86 chr2 49651076 49651185 -203605398 + L1ME2 LINE L1 760 856 -5214 807 229 72 8 chr2 49651204 49651440 -203605143 + L1ME2 LINE L1 4778 5028 -1052 776 151 0 32 chr2 49651461 49651587 -203604996 + FLAM_C SINE Alu 2 123 -20 2178 170 37 121 chr2 49651599 49651683 -203604900 + L1ME2 LINE L1 5049 5138 -960 1583 175 0 34 chr2 49651683 49651809 -203604774 + AluJo SINE Alu 1 130 -182 2217 110 0 0 chr2 49651809 49652117 -203604466 - AluSg SINE Alu -2 308 1 1583 175 0 34 chr2 49652117 49652287 -203604296 + AluJo SINE Alu 130 287 -25 2178 170 37 121 chr2 49652287 49652510 -203604073 + L1ME2 LINE L1 5138 5378 -720 1490 163 58 4 chr2 49652510 49652786 -203603797 + AluSx SINE Alu 1 291 -21 2178 170 37 121 chr2 49652786 49653252 -203603331 + L1ME2 LINE L1 5378 5756 -342 341 172 22 149 chr2 49653294 49653319 -203603264 + L1ME2 LINE L1 5973 6000 -98 8246 56 0 19 chr2 49653319 49654345 -203602238 + LTR13 LTR ERVK 1 1007 0 341 172 22 149 chr2 49654345 49654391 -203602192 + L1ME2 LINE L1 6000 6022 -76 1585 182 10 10 chr2 49654391 49654688 -203601895 + AluJo SINE Alu 1 297 -15 341 172 22 149 chr2 49654688 49654749 -203601834 + L1ME2 LINE L1 6022 6089 -9 1706 165 3 16 chr2 49654752 49655055 -203601528 - AluJb SINE Alu -10 302 4 216 293 71 38 chr2 49655102 49655314 -203601269 - L2 LINE L2 -1637 1677 1459 756 188 0 0 chr2 49655314 49655431 -203601152 + FLAM_C SINE Alu 2 118 -25 2230 92 13 3 chr2 49655583 49655888 -203600695 + AluSx SINE Alu 1 308 -4 422 352 53 11 chr2 49656370 49656634 -203599949 + L1MC4a LINE L1 5594 5868 -1940 807 175 13 0 chr2 49656688 49656842 -203599741 + FRAM SINE Alu 1 40 0 1580 181 3 17 chr2 49657344 49657643 -203598940 - AluJb SINE Alu -17 295 1 2210 87 3 13 chr2 49658127 49658439 -203598144 - AluSg SINE Alu -1 309 1 1626 166 62 0 chr2 49658442 49658732 -203597851 - AluJo SINE Alu -4 308 1 2420 15 0 0 chr2 49658890 49659157 -203597426 - SVA Other Other -2 1384 1118 1885 117 36 0 chr2 49659314 49659595 -203596988 + AluSx SINE Alu 1 291 -21 1657 165 0 43 chr2 49659595 49659916 -203596667 + AluJo SINE Alu 1 308 -4 492 309 79 88 chr2 49660332 49660667 -203595916 + L2 LINE L2 2481 2817 -455 778 189 70 50 chr2 49660667 49660727 -203595856 - MER3 DNA MER1_type 0 209 152 1779 158 3 0 chr2 49660727 49661011 -203595572 - AluJb SINE Alu -27 285 1 778 189 70 50 chr2 49661011 49661151 -203595432 - MER3 DNA MER1_type -57 152 5 492 309 79 88 chr2 49661151 49661498 -203595085 + L2 LINE L2 2817 3226 -46 904 289 87 32 chr2 49661579 49662018 -203594565 - MLT1K LTR MaLR 0 588 126 946 162 30 6 chr2 49662364 49662531 -203594052 + AluSx SINE Alu 1 171 -141 806 148 15 0 chr2 49662618 49662753 -203593830 + AluSx SINE Alu 171 307 -3 1493 178 36 48 chr2 49662853 49663162 -203593421 + AluJo SINE Alu 1 305 -7 2945 196 55 63 chr2 49663162 49663376 -203593207 - L1ME1 LINE L1 -6 6160 5946 1446 171 0 98 chr2 49663376 49663703 -203592880 - AluJb SINE Alu -7 295 1 2945 196 55 63 chr2 49663703 49663978 -203592605 - L1ME1 LINE L1 -220 5946 5670 689 195 0 39 chr2 49663978 49664106 -203592477 - FLAM_A SINE Alu -10 123 1 2945 196 55 63 chr2 49664106 49664390 -203592193 - L1ME1 LINE L1 -496 5670 5391 1727 179 3 3 chr2 49664390 49664687 -203591896 + AluJb SINE Alu 1 297 -15 2945 196 55 63 chr2 49664687 49664749 -203591834 - L1ME1 LINE L1 -775 5391 5330 354 115 16 16 chr2 49664752 49664813 -203591770 - AluJb SINE Alu -10 292 232 4066 108 9 0 chr2 49664818 49665367 -203591216 - MER41A LTR ERV1 0 554 1 3496 109 14 2 chr2 49665368 49665862 -203590721 - MER84 LTR ERVI -5 502 3 1199 189 77 0 chr2 49665864 49666086 -203590497 - AluJb SINE Alu -73 239 1 2731 185 40 37 chr2 49666088 49666578 -203590005 - L1ME1 LINE L1 -817 5329 4835 2082 241 52 48 chr2 49666578 49666842 -203589741 - LTR26 LTR ERV1 0 603 341 1943 126 0 0 chr2 49666842 49667150 -203589433 + AluSx SINE Alu 7 314 0 2082 241 52 48 chr2 49667150 49667485 -203589098 - LTR26 LTR ERV1 -262 341 1 2731 185 40 37 chr2 49667485 49667665 -203588918 - L1ME1 LINE L1 -1311 4835 4657 819 151 0 14 chr2 49667669 49667815 -203588768 - AluSg/x SINE Alu -1 309 166 2122 97 10 0 chr2 49667817 49668117 -203588466 - AluSp SINE Alu -10 303 1 1803 144 3 50 chr2 49668117 49668436 -203588147 - AluSx SINE Alu -8 304 1 2192 106 0 28 chr2 49668739 49669061 -203587522 + AluSq SINE Alu 1 313 0 2077 113 0 0 chr2 49669247 49669547 -203587036 - AluY SINE Alu -11 300 1 2642 164 29 70 chr2 49669679 49669916 -203586667 + LTR49 LTR ERV1 1 246 -349 3498 87 4 0 chr2 49669916 49670385 -203586198 + L1PA10 LINE L1 5694 6164 -4 2642 164 29 70 chr2 49670385 49670744 -203585839 + LTR49 LTR ERV1 246 572 -23 974 256 73 0 chr2 49670762 49670996 -203585587 + MIR SINE MIR 12 262 0 9929 180 48 66 chr2 49671160 49673329 -203583254 + Tigger5 DNA MER2_type 1 2124 -199 2110 125 3 0 chr2 49673329 49673634 -203582949 + AluSx SINE Alu 1 306 -6 9929 180 48 66 chr2 49673634 49673830 -203582753 + Tigger5 DNA MER2_type 2124 2322 -1 1160 145 5 21 chr2 49674307 49674500 -203582083 - LTR24B LTR ERV1 -4 572 383 876 182 48 0 chr2 49674500 49674665 -203581918 - FRAM SINE Alu -4 172 1 2253 125 53 13 chr2 49674665 49675040 -203581543 - LTR24B LTR ERV1 -186 390 1 2108 121 3 0 chr2 49675076 49675373 -203581210 - AluSq SINE Alu -11 302 5 1532 196 77 91 chr2 49675514 49676123 -203580460 + LTR49 LTR ERV1 1 561 -4 2919 160 84 40 chr2 49676147 49676163 -203580420 + MER4D LTR ERV1 310 324 -579 2154 132 3 0 chr2 49676163 49676474 -203580109 - AluSx SINE Alu 0 312 1 2919 160 84 40 chr2 49676474 49676683 -203579900 + MER4D LTR ERV1 324 522 -381 2202 163 55 36 chr2 49676683 49676722 -203579861 - MSTB LTR MaLR 0 426 389 2130 109 0 0 chr2 49676722 49677044 -203579539 + AluSx SINE Alu 1 322 0 2202 163 55 36 chr2 49677044 49677421 -203579162 - MSTB LTR MaLR -37 389 1 2919 160 84 40 chr2 49677421 49677763 -203578820 + MER4D LTR ERV1 522 903 0 1590 156 96 45 chr2 49677777 49677824 -203578759 + LTR49 LTR ERV1 1 44 -551 2294 78 3 3 chr2 49677824 49678130 -203578453 - AluSq SINE Alu -7 306 1 1590 156 96 45 chr2 49678130 49678416 -203578167 + LTR49 LTR ERV1 44 351 -244 641 205 26 19 chr2 49678384 49678540 -203578043 + LTR29 LTR ERV1 394 550 -72 * 2395 108 101 5 chr2 49678540 49678938 -203577645 + LTR23 LTR ERV1 1 436 -1 3541 96 56 96 chr2 49679321 49679969 -203576614 + LTR29 LTR ERV1 1 622 0 953 205 0 0 chr2 49680003 49680169 -203576414 + FRAM SINE Alu 1 166 0 652 173 0 6 chr2 49680588 49680842 -203575741 + AluJ SINE Alu 1 303 -9 463 175 21 21 chr2 49680916 49681013 -203575570 + LTR49-int LTR ERV1 1558 1654 -4677 1770 142 34 7 chr2 49681063 49681359 -203575224 + LTR28 LTR ERV1 1 304 -716 347 280 13 47 chr2 49681393 49681543 -203575040 + LTR28 LTR ERV1 546 690 -330 263 136 85 34 chr2 49681563 49681622 -203574961 + LTR27 LTR ERV1 575 636 0 963 149 11 37 chr2 49681633 49681726 -203574857 + AluJo SINE Alu 49 136 -176 585 0 0 0 chr2 49681726 49681791 -203574792 + (TA)n Simple_repeat Simple_repeat 1 65 0 963 149 11 37 chr2 49681791 49681885 -203574698 + AluJo SINE Alu 136 231 -81 720 124 26 0 chr2 49681888 49682001 -203574582 + FRAM SINE Alu 58 173 -3 4059 200 72 28 chr2 49682048 49683134 -203573449 + LTR49-int LTR ERV1 746 2674 -3657 1855 141 47 0 chr2 49683147 49683445 -203573138 + AluSx SINE Alu 1 312 0 492 125 231 19 chr2 49683464 49683568 -203573015 + LTR49-int LTR ERV1 4210 4335 -1996 2503 117 67 8 chr2 49683568 49683969 -203572614 + MSTA LTR MaLR 1 425 -3 9273 167 23 17 chr2 49683969 49684449 -203572134 + MSTA-int LTR MaLR 7 483 -1168 1346 178 77 18 chr2 49684449 49684735 -203571848 + AluJb SINE Alu 5 307 -5 9273 167 23 17 chr2 49684735 49684802 -203571781 + MSTA-int LTR MaLR 483 548 -1103 2143 126 0 0 chr2 49684802 49685111 -203571472 + AluSg SINE Alu 1 309 -1 9273 167 23 17 chr2 49685111 49686130 -203570453 + MSTA-int LTR MaLR 548 1583 -68 305 143 0 0 chr2 49686130 49686172 -203570411 - AluSg/x SINE Alu -132 168 127 857 123 0 36 chr2 49686172 49686310 -203570273 - AluJo/FLAM SINE Alu -169 133 1 3948 160 30 68 chr2 49686311 49686949 -203569634 + LTR49-int LTR ERV1 3857 4518 -605 1729 158 9 38 chr2 49686949 49687266 -203569317 - AluJo SINE Alu -4 308 1 3948 160 30 68 chr2 49687266 49687448 -203569135 + LTR49-int LTR ERV1 4518 4207 -916 1691 194 0 0 chr2 49687448 49687742 -203568841 + AluJb SINE Alu 1 294 -18 3948 160 30 68 chr2 49687742 49687857 -203568726 + LTR49-int LTR ERV1 4206 4324 -799 1934 147 0 0 chr2 49687859 49688145 -203568438 - AluSx SINE Alu -26 286 1 1846 100 50 4 chr2 49688146 49688425 -203568158 + LTR23 LTR ERV1 122 413 -24 1986 115 3 7 chr2 49688428 49688723 -203567860 + AluSx SINE Alu 1 294 -18 245 128 0 0 chr2 49688756 49688795 -203567788 + LTR23 LTR ERV1 399 437 0 263 161 194 0 chr2 49688798 49688860 -203567723 + LTR49 LTR ERV1 517 590 -5 1674 141 27 48 chr2 49688864 49689197 -203567386 - MER50 LTR ERV1 -30 704 379 1385 99 16 0 chr2 49689175 49689366 -203567217 - MER50 LTR ERV1 -486 248 55 * 1170 190 82 18 chr2 49689575 49689854 -203566729 + MER90 LTR ERV1 72 368 -246 2401 74 3 0 chr2 49689859 49690171 -203566412 + AluSp SINE Alu 1 313 0 799 165 91 51 chr2 49690174 49690350 -203566233 + AluJb SINE Alu 129 311 -1 818 207 7 120 chr2 49690376 49690547 -203566036 + AluY SINE Alu 13 143 -168 180 0 0 0 chr2 49690547 49690567 -203566016 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 818 207 7 120 chr2 49690567 49690670 -203565913 + AluY SINE Alu 143 256 -55 1632 147 0 39 chr2 49690670 49690956 -203565627 - AluJb SINE Alu -37 275 1 556 183 43 0 chr2 49690959 49691074 -203565509 + MER90 LTR ERV1 361 480 -134 803 179 0 0 chr2 49691628 49691768 -203564815 + FLAM_C SINE Alu 1 140 -3 1483 156 9 107 chr2 49691903 49692061 -203564522 - AluJo SINE Alu -8 294 183 1747 178 0 3 chr2 49692061 49692365 -203564218 - AluJb SINE Alu -9 303 1 1483 156 9 107 chr2 49692365 49692532 -203564051 - AluJo SINE Alu -119 183 1 1417 151 3 151 chr2 49693472 49693648 -203562935 - AluJb SINE Alu -3 299 99 441 0 0 0 chr2 49693648 49693697 -203562886 + (TA)n Simple_repeat Simple_repeat 2 50 0 2090 118 0 10 chr2 49693697 49694001 -203562582 - AluSx SINE Alu -11 301 1 1417 151 3 151 chr2 49694001 49694020 -203562563 - AluJb SINE Alu -202 100 80 2334 107 0 0 chr2 49694020 49694330 -203562253 - AluSx SINE Alu -2 310 1 1417 151 3 151 chr2 49694330 49694348 -203562235 - AluJb SINE Alu -222 80 61 2213 95 0 0 chr2 49694348 49694642 -203561941 - AluSg SINE Alu -16 294 1 751 168 8 8 chr2 49694650 49694775 -203561808 - FLAM_C SINE Alu -17 126 2 1818 131 39 3 chr2 49695013 49695296 -203561287 - AluSx SINE Alu -19 293 1 546 232 40 57 chr2 49695480 49695657 -203560926 + MER5B DNA MER1_type 2 175 -3 1222 144 161 70 chr2 49695736 49696021 -203560562 + AluJo SINE Alu 1 311 -1 440 197 0 0 chr2 49696023 49696094 -203560489 + AluSc SINE Alu 128 198 -111 736 100 0 0 chr2 49696094 49696194 -203560389 + MER34B LTR ERV1 302 401 -164 768 109 0 0 chr2 49696195 49696296 -203560287 + AluSq/x SINE Alu 6 106 -207 1675 91 0 0 chr2 49696389 49696610 -203559973 - MER34B LTR ERV1 0 565 345 1966 129 7 3 chr2 49696611 49696914 -203559669 + AluSq SINE Alu 1 304 -9 1199 102 0 0 chr2 49696914 49697080 -203559503 + AluSg/x SINE Alu 132 297 -13 1990 149 11 47 chr2 49697094 49697456 -203559127 - MER34B LTR ERV1 -216 349 1 202 336 139 29 chr2 49697525 49697662 -203558921 - L2 LINE L2 -2 3270 3119 458 264 58 108 chr2 49697681 49697714 -203558869 + L1ME4a LINE L1 5679 5712 -409 2256 70 3 0 chr2 49697714 49698021 -203558562 - AluSp SINE Alu 0 308 1 458 264 58 108 chr2 49698021 49698075 -203558508 + L1ME4a LINE L1 5712 5767 -354 2025 114 3 17 chr2 49698075 49698373 -203558210 - AluSx SINE Alu -16 296 3 458 264 58 108 chr2 49698373 49698408 -203558175 + L1ME4a LINE L1 5767 5802 -319 3916 145 6 37 chr2 49698408 49698479 -203558104 - MER41B LTR ERV1 0 635 563 2070 137 0 3 chr2 49698479 49698793 -203557790 + AluSq SINE Alu 1 313 0 3916 145 6 37 chr2 49698793 49698909 -203557674 - MER41B LTR ERV1 -72 563 445 1902 103 39 4 chr2 49698909 49699190 -203557393 - AluSx SINE Alu -21 291 1 3916 145 6 37 chr2 49699190 49699656 -203556927 - MER41B LTR ERV1 -190 445 1 458 264 58 108 chr2 49699656 49699788 -203556795 + L1ME4a LINE L1 5802 5923 -198 3159 87 18 22 chr2 49699920 49700366 -203556217 - MLT2A1 LTR ERVL 0 444 1 1613 176 3 14 chr2 49700378 49700673 -203555910 - AluJo SINE Alu -20 292 1 2159 110 0 10 chr2 49701012 49701320 -203555263 + AluSg SINE Alu 1 305 -5 741 229 41 6 chr2 49701424 49701594 -203554989 - MER110A LTR ERV1 -117 351 176 2177 116 0 0 chr2 49701599 49701910 -203554673 + AluSx SINE Alu 1 311 -1 788 189 6 51 chr2 49701939 49702114 -203554469 - MER20 DNA MER1_type 0 219 53 761 195 49 0 chr2 49702149 49702313 -203554270 - MER110A LTR ERV1 -296 172 1 1234 144 5 19 chr2 49702442 49702650 -203553933 + AluSx SINE Alu 1 205 -107 1461 184 11 55 chr2 49702745 49703092 -203553491 - MER31A LTR ERV1 0 485 154 1856 160 34 70 chr2 49703112 49703280 -203553303 - LTR56 LTR ERV1 0 445 272 2062 92 0 3 chr2 49703280 49703587 -203552996 + AluSc SINE Alu 1 306 0 1856 160 34 70 chr2 49703587 49703861 -203552722 - LTR56 LTR ERV1 -173 272 18 2073 97 0 10 chr2 49703867 49704165 -203552418 + AluSx SINE Alu 1 295 -17 436 184 35 23 chr2 49704167 49704178 -203552405 - MER31B LTR ERV1 -291 175 166 1852 120 10 49 chr2 49704178 49704486 -203552097 + AluSq SINE Alu 1 296 -17 436 184 35 23 chr2 49704486 49704561 -203552022 - MER31B LTR ERV1 -300 166 88 845 191 5 48 chr2 49704570 49704759 -203551824 + AluJo SINE Alu 45 225 -87 412 211 13 0 chr2 49704773 49704849 -203551734 - MER31B LTR ERV1 -389 77 1 668 196 13 51 chr2 49705629 49705787 -203550796 + FAM SINE Alu 7 158 -27 2053 115 0 0 chr2 49705831 49706117 -203550466 + AluSg SINE Alu 1 286 -24 877 216 195 14 chr2 49706134 49706524 -203550059 - MER39 LTR ERV1 -203 504 6 1701 160 17 3 chr2 49706603 49706897 -203549686 + AluSx SINE Alu 1 298 -14 961 199 3 158 chr2 49707231 49707317 -203549266 + MLT1A1 LTR MaLR 60 158 -207 2434 61 0 0 chr2 49707317 49707614 -203548969 - AluY SINE Alu -14 297 1 961 199 3 158 chr2 49707614 49707889 -203548694 + MLT1A1 LTR MaLR 158 365 0 249 230 230 11 chr2 49707889 49707968 -203548615 - MLT1H LTR MaLR -43 506 409 1069 181 0 9 chr2 49707968 49708184 -203548399 - AluY SINE Alu -15 296 83 451 102 0 0 chr2 49708184 49708243 -203548340 - AluSg/x SINE Alu -62 247 189 917 117 0 7 chr2 49708245 49708382 -203548201 - AluJb SINE Alu -176 136 1 605 234 50 116 chr2 49708388 49708708 -203547875 - MLT1H LTR MaLR -143 406 108 196 224 0 41 chr2 49708783 49708832 -203547751 - L2 LINE L2 -37 3235 3189 2129 105 3 0 chr2 49708952 49709258 -203547325 + AluSx SINE Alu 1 307 -5 651 264 216 56 chr2 49709293 49709591 -203546992 - L2 LINE L2 -297 3016 2767 1656 159 41 0 chr2 49709591 49709886 -203546697 + AluJo SINE Alu 1 307 -5 1790 112 87 17 chr2 49709887 49710174 -203546409 + AluSq SINE Alu 1 307 -6 651 264 216 56 chr2 49710174 49710445 -203546138 - L2 LINE L2 -546 2767 2541 1840 168 0 0 chr2 49710445 49710748 -203545835 + AluJb SINE Alu 1 303 -9 651 264 216 56 chr2 49710748 49710824 -203545759 - L2 LINE L2 -772 2541 2269 1215 167 56 24 chr2 49710839 49711091 -203545492 - MER110 LTR ERV1 -174 317 58 2259 94 0 28 chr2 49711101 49711420 -203545163 - AluSx SINE Alu -2 310 1 816 274 41 13 chr2 49711491 49711736 -203544847 - MIR SINE MIR 0 262 8 247 203 76 51 chr2 49711788 49711867 -203544716 - MER34 LTR ERV1 0 542 462 740 204 11 66 chr2 49712242 49712263 -203544320 + AluJo SINE Alu 126 147 -165 1944 135 3 3 chr2 49712263 49712566 -203544017 + AluSx SINE Alu 1 303 -9 740 204 11 66 chr2 49712566 49712725 -203543858 + AluJo SINE Alu 147 296 -16 233 236 0 67 chr2 49712730 49712819 -203543764 - MER34B LTR ERV1 -448 117 35 359 299 103 20 chr2 49712938 49713142 -203543441 - MIR SINE MIR -11 251 31 1619 141 47 14 chr2 49713377 49713654 -203542929 + AluJo SINE Alu 8 293 -19 2398 177 106 62 chr2 49713961 49714178 -203542405 + LTR65 LTR ERV1 1 207 -462 1492 161 10 57 chr2 49714178 49714476 -203542107 - AluJb SINE Alu -18 294 11 2398 177 106 62 chr2 49714476 49714898 -203541685 + LTR65 LTR ERV1 207 668 -1 1468 150 42 52 chr2 49715079 49715385 -203541198 - AluJo SINE Alu -9 303 1 802 246 64 34 chr2 49715414 49715650 -203540933 - MIR SINE MIR -13 249 7 411 176 122 54 chr2 49715706 49715854 -203540729 - MER119 DNA MER1_type -109 474 317 259 140 12 6 chr2 49715871 49716114 -203540469 + AluJo SINE Alu 1 301 -1 260 286 143 23 chr2 49716613 49716746 -203539837 - MIR SINE MIR -101 161 13 2046 122 13 0 chr2 49716802 49717105 -203539478 + AluSg SINE Alu 1 307 -3 1950 152 0 3 chr2 49717179 49717489 -203539094 + AluSx SINE Alu 1 309 -3 1100 159 0 68 chr2 49717492 49717555 -203539028 + AluJb SINE Alu 85 151 -161 1764 150 17 0 chr2 49717555 49717848 -203538735 + AluSx SINE Alu 3 300 -12 1100 159 0 68 chr2 49717848 49718004 -203538579 + AluJb SINE Alu 151 289 -23 590 275 21 7 chr2 49718103 49718245 -203538338 + MIR SINE MIR 5 148 -114 722 182 172 45 chr2 49718254 49718452 -203538131 + MER46C DNA MER2_type 9 231 -107 461 149 230 0 chr2 49718515 49718602 -203537981 + U6 snRNA snRNA 1 107 0 2215 62 0 36 chr2 49718628 49718936 -203537647 - AluY SINE Alu -14 297 1 2297 73 0 3 chr2 49719183 49719485 -203537098 - AluSq SINE Alu -12 301 1 325 213 67 0 chr2 49719497 49719572 -203537011 + MER46C DNA MER2_type 258 337 -1 332 230 14 0 chr2 49719574 49719648 -203536935 + MIR SINE MIR 154 228 -34 29 47 0 0 chr2 49720173 49720216 -203536367 + GC_rich Low_complexity Low_complexity 1 43 0 2022 94 20 3 chr2 49721598 49721897 -203534686 - AluSp SINE Alu -9 304 1 1917 110 11 0 chr2 49721977 49722258 -203534325 - AluSg SINE Alu -26 284 1 1746 119 41 7 chr2 49722361 49722654 -203533929 - AluSx SINE Alu -9 303 1 2144 105 3 0 chr2 49723474 49723770 -203532813 - AluSq SINE Alu -16 297 1 680 173 0 0 chr2 49723961 49724071 -203532512 - FLAM_C SINE Alu -32 111 2 1436 144 144 15 chr2 49724180 49724444 -203532139 + AluJb SINE Alu 1 298 -4 1322 177 55 19 chr2 49724773 49725044 -203531539 - AluJb SINE Alu -31 281 1 2357 93 0 0 chr2 49725379 49725689 -203530894 - AluSg SINE Alu 0 310 1 2316 86 0 6 chr2 49725695 49726008 -203530575 - AluSx SINE Alu -1 311 1 2072 105 20 3 chr2 49726021 49726360 -203530223 - AluSg1 SINE Alu 0 344 1 1092 147 51 5 chr2 49726749 49726946 -203529637 + MER2 DNA MER2_type 1 206 -139 833 191 22 11 chr2 49726951 49727134 -203529449 - AluJb SINE Alu -4 308 124 22 35 0 0 chr2 49727136 49727165 -203529418 + AT_rich Low_complexity Low_complexity 1 29 0 1327 153 0 9 chr2 49727276 49727492 -203529091 + AluSx SINE Alu 1 214 -98 273 29 0 0 chr2 49728279 49728313 -203528270 + (TG)n Simple_repeat Simple_repeat 1 34 0 1776 92 7 72 chr2 49728804 49728990 -203527593 - AluSx SINE Alu -1 311 149 1983 123 3 0 chr2 49728990 49729282 -203527301 - AluSq SINE Alu -20 293 1 1776 92 7 72 chr2 49729282 49729387 -203527196 - AluSx SINE Alu -163 149 39 707 161 0 94 chr2 49729637 49729786 -203526797 - FLAM_C SINE Alu -4 139 5 1119 172 0 100 chr2 49729801 49730091 -203526492 - AluJo SINE Alu -13 299 39 2331 94 7 0 chr2 49730175 49730484 -203526099 + AluSx SINE Alu 1 311 -1 1819 92 77 0 chr2 49730484 49730789 -203525794 + AluSg1 SINE Alu 1 325 0 180 163 0 122 chr2 49730804 49730853 -203525730 + L3b LINE CR1 1528 1570 -13 1845 133 7 3 chr2 49730874 49731160 -203525423 - AluSx SINE Alu -19 293 7 1480 105 14 5 chr2 49731194 49731404 -203525179 + AluSx SINE Alu 1 212 -100 1908 150 3 3 chr2 49731408 49731708 -203524875 - AluSx SINE Alu -12 300 1 2136 112 0 0 chr2 49731935 49732229 -203524354 - AluSg SINE Alu -16 294 1 243 0 0 0 chr2 49732559 49732586 -203523997 + (TG)n Simple_repeat Simple_repeat 2 28 0 1987 137 0 16 chr2 49732599 49732906 -203523677 - AluSx SINE Alu -9 303 2 344 157 22 67 chr2 49732911 49733000 -203523583 - AluJb SINE Alu -173 129 45 840 137 0 58 chr2 49733538 49733677 -203522906 - FLAM_C SINE Alu -11 132 2 1599 152 0 59 chr2 49733815 49734105 -203522478 + AluSx SINE Alu 1 273 -39 1057 107 107 6 chr2 49734178 49734346 -203522237 - MER30 DNA MER1_type -33 197 13 325 282 51 45 chr2 49734501 49734657 -203521926 - MIR3 SINE MIR 0 208 52 353 173 30 1 chr2 49734781 49734851 -203521732 - FLAM_A SINE Alu -15 118 53 1217 148 9 37 chr2 49735437 49735653 -203520930 - Tigger5 DNA MER2_type -62 2261 2052 227 214 0 0 chr2 49735649 49735691 -203520892 - Tigger5 DNA MER2_type -2265 58 17 * 1808 176 3 3 chr2 49738498 49738805 -203517778 - AluJb SINE Alu -5 307 1 778 176 50 80 chr2 49738880 49739079 -203517504 - AluJb SINE Alu -118 194 2 1516 176 20 7 chr2 49739473 49739769 -203516814 - AluSq SINE Alu -13 300 1 198 0 0 0 chr2 49739772 49739794 -203516789 + (T)n Simple_repeat Simple_repeat 1 22 0 1887 104 7 28 chr2 49740039 49740354 -203516229 - AluSg SINE Alu 0 309 1 806 168 0 0 chr2 49741282 49741419 -203515164 - AluJo SINE Alu -47 265 129 326 273 43 102 chr2 49741614 49741801 -203514782 - MER5B DNA MER1_type -1 177 2 2168 75 17 7 chr2 49742320 49742614 -203513969 - AluSq SINE Alu -16 297 1 27 29 0 0 chr2 49743880 49743914 -203512669 + AT_rich Low_complexity Low_complexity 1 34 0 920 110 0 8 chr2 49746001 49746128 -203510455 - AluJo SINE Alu -181 131 6 211 277 138 11 chr2 49747786 49747880 -203508703 + L2 LINE L2 3203 3308 -5 213 338 168 28 chr2 49748236 49748368 -203508215 + L2 LINE L2 2072 2184 -1130 2003 105 39 14 chr2 49748368 49748653 -203507930 - AluSx SINE Alu -20 292 1 213 338 168 28 chr2 49748653 49748919 -203507664 + L2 LINE L2 2184 2526 -788 647 223 8 0 chr2 49748920 49749041 -203507542 - FLAM_A SINE Alu -19 123 2 189 352 56 0 chr2 49749090 49749161 -203507422 + L2 LINE L2 2546 2620 -694 2450 70 3 16 chr2 49750555 49750869 -203505714 - AluSx SINE Alu -2 310 1 3386 122 179 9 chr2 49751296 49751510 -203505073 - Tigger1 DNA MER2_type 0 2418 2242 2262 115 0 10 chr2 49751510 49751815 -203504768 - AluJo SINE Alu -10 302 1 3386 122 179 9 chr2 49751815 49752287 -203504296 - Tigger1 DNA MER2_type -176 2242 1615 917 203 167 11 chr2 49752304 49752719 -203503864 - MER39 LTR ERV1 -165 542 1 1880 153 0 3 chr2 49753308 49753595 -203502988 - AluJo SINE Alu -4 308 23 8576 113 52 53 chr2 49753605 49755006 -203501577 - Tigger1 DNA MER2_type -812 1606 205 1619 100 127 15 chr2 49755006 49755265 -203501318 + AluSg1 SINE Alu 5 292 -17 8576 113 52 53 chr2 49755265 49755468 -203501115 - Tigger1 DNA MER2_type -2213 205 3 23 0 0 0 chr2 49756001 49756024 -203500559 + AT_rich Low_complexity Low_complexity 1 23 0 2188 93 0 0 chr2 49756351 49756649 -203499934 - AluSg1 SINE Alu 0 298 1 569 226 44 97 chr2 49757756 49758004 -203498579 + MIR SINE MIR 2 236 -26 1904 145 3 29 chr2 49758325 49758464 -203498119 + AluSx SINE Alu 1 142 -170 2584 59 0 0 chr2 49758464 49758770 -203497813 + AluY SINE Alu 1 306 -5 1904 145 3 29 chr2 49758770 49758940 -203497643 + AluSx SINE Alu 142 302 -10 1391 209 27 14 chr2 49758946 49759238 -203497345 + AluJb SINE Alu 1 296 -6 2263 83 10 10 chr2 49760608 49760908 -203495675 + AluSq SINE Alu 1 300 -13 854 143 97 39 chr2 49760985 49761139 -203495444 - FRAM SINE Alu -17 159 1 1425 169 46 23 chr2 49761369 49761630 -203494953 + AluJb SINE Alu 29 295 -17 255 233 78 0 chr2 49761857 49761947 -203494636 + L1ME4a LINE L1 6014 6110 -11 1915 179 10 0 chr2 49762704 49763012 -203493571 - AluJb SINE Alu -1 311 1 2397 74 3 0 chr2 49763195 49763492 -203493091 - AluY SINE Alu -13 298 1 508 255 65 30 chr2 49763522 49763785 -203492798 - HAL1 LINE L1 -89 2418 2147 830 128 8 0 chr2 49763899 49764024 -203492559 - AluSg/x SINE Alu -10 300 175 243 245 113 19 chr2 49764024 49764130 -203492453 - HAL1 LINE L1 -538 1969 1854 2120 121 13 0 chr2 49764437 49764742 -203491841 - AluSx SINE Alu -3 309 1 1957 141 24 0 chr2 49764837 49765127 -203491456 - AluSx SINE Alu -15 297 1 1491 181 50 25 chr2 49765135 49765416 -203491167 - AluJo SINE Alu -24 288 1 1667 139 4 11 chr2 49765504 49765771 -203490812 + AluSx SINE Alu 44 308 -4 1900 92 77 0 chr2 49766164 49766469 -203490114 - AluSg1 SINE Alu 0 325 1 2271 127 7 0 chr2 49766469 49766776 -203489807 - AluSx SINE Alu -1 311 3 1097 183 0 100 chr2 49766862 49767152 -203489431 + AluJo SINE Alu 39 299 -13 633 178 0 96 chr2 49767167 49767313 -203489270 + FLAM_C SINE Alu 5 136 -7 1511 140 104 36 chr2 49767834 49768112 -203488471 - AluSx SINE Alu -15 297 1 2202 99 3 0 chr2 49768150 49768457 -203488126 - AluSx SINE Alu 0 308 1 832 219 27 60 chr2 49768529 49768863 -203487720 + L1MC5 LINE L1 7603 7925 -36 505 232 156 54 chr2 49769124 49769400 -203487183 + HAL1b LINE L1 392 695 -653 569 226 44 97 chr2 49770305 49770553 -203486030 + MIR SINE MIR 2 236 -26 1884 147 0 32 chr2 49770873 49771014 -203485569 + AluSx SINE Alu 1 145 -167 2407 62 3 10 chr2 49771014 49771322 -203485261 + AluY SINE Alu 1 306 -5 1884 147 0 32 chr2 49771322 49771492 -203485091 + AluSx SINE Alu 145 302 -10 1391 209 27 14 chr2 49771498 49771790 -203484793 + AluJb SINE Alu 1 296 -6 2187 97 10 10 chr2 49773161 49773471 -203483112 + AluY SINE Alu 1 310 -1 839 227 88 24 chr2 49773471 49773766 -203482817 + L1MC5 LINE L1 7021 7334 -627 2085 89 4 4 chr2 49773882 49774183 -203482400 - AluSc SINE Alu 0 301 1 2354 73 0 7 chr2 49774255 49774558 -203482025 - AluSc SINE Alu -7 302 2 202 263 156 50 chr2 49774793 49774953 -203481630 + MIR SINE MIR 86 262 0 25 31 0 0 chr2 49775011 49775043 -203481540 + AT_rich Low_complexity Low_complexity 1 32 0 1470 196 10 41 chr2 49775043 49775334 -203481249 - AluJb SINE Alu -30 282 1 321 309 20 61 chr2 49775467 49775813 -203480770 - L1MEd LINE L1 -3432 2697 2366 308 262 151 24 chr2 49775817 49775943 -203480640 - L1MEd LINE L1 -3739 2390 2249 2220 96 3 0 chr2 49775979 49776285 -203480298 - AluSx SINE Alu 0 307 1 348 163 78 163 chr2 49776349 49776515 -203480068 - L1MEd LINE L1 -5136 983 832 290 257 48 107 chr2 49776665 49776871 -203479712 - L1MEd LINE L1 -5825 294 101 1675 149 66 10 chr2 49776892 49777181 -203479402 - AluSx SINE Alu -7 305 1 195 365 36 29 chr2 49778113 49778250 -203478333 + L2 LINE L2 1386 1523 -1791 2109 110 10 3 chr2 49778429 49778719 -203477864 + AluSp SINE Alu 1 292 -21 979 141 163 11 chr2 49778884 49779160 -203477423 - MER33 DNA MER1_type -6 318 1 1966 155 3 3 chr2 49779207 49779510 -203477073 + AluSx SINE Alu 1 303 -9 1078 140 42 76 chr2 49779515 49779671 -203476912 - MER7A DNA MER2_type -2812 226 81 2086 125 20 3 chr2 49779671 49779968 -203476615 + AluSx SINE Alu 1 302 -10 1078 140 42 76 chr2 49779968 49780047 -203476536 - MER7A DNA MER2_type -2957 81 1 2506 72 3 0 chr2 49780088 49780395 -203476188 + AluY SINE Alu 1 308 -3 1803 117 19 42 chr2 49780469 49780776 -203475807 + MER1B DNA MER1_type 40 339 0 24 32 0 0 chr2 49780830 49780861 -203475722 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr2 49781463 49781487 -203475096 + AT_rich Low_complexity Low_complexity 1 24 0 325 279 129 21 chr2 49781747 49781887 -203474696 - L2 LINE L2 -40 3273 3119 627 364 99 16 chr2 49782098 49782651 -203473932 - L2 LINE L2 -486 2828 2230 2060 134 7 13 chr2 49783465 49783771 -203472812 - AluSg SINE Alu -6 304 1 318 186 0 43 chr2 49784154 49784224 -203472359 - U6 snRNA snRNA -3 104 38 2280 100 7 0 chr2 49784234 49784534 -203472049 - AluSx SINE Alu -10 302 1 217 327 89 0 chr2 49784692 49784793 -203471790 - MIR SINE MIR -86 176 67 921 247 36 24 chr2 49784960 49785211 -203471372 - MIR SINE MIR -5 257 4 2264 99 0 0 chr2 49785320 49785614 -203470969 - AluSg SINE Alu -16 294 1 25 83 0 0 chr2 49785618 49785678 -203470905 + AT_rich Low_complexity Low_complexity 1 60 0 588 258 94 74 chr2 49785760 49786016 -203470567 + MIR SINE MIR 1 261 -1 254 244 12 70 chr2 49786244 49786330 -203470253 - MARNA DNA Mariner -75 511 431 346 60 0 0 chr2 49786441 49786491 -203470092 - Alu SINE Alu -1 301 252 198 0 0 0 chr2 49786746 49786768 -203469815 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 375 250 38 0 chr2 49786781 49786861 -203469722 + MIR3 SINE MIR 78 160 -48 717 218 45 6 chr2 49786861 49787040 -203469543 - MER5A DNA MER1_type 0 189 4 1138 126 111 15 chr2 49787445 49787643 -203468940 - AluJb SINE Alu -12 300 84 2138 119 7 13 chr2 49787796 49788099 -203468484 + AluSq SINE Alu 1 301 -12 810 224 6 6 chr2 49788208 49788378 -203468205 + FRAM SINE Alu 1 169 -7 520 318 120 0 chr2 49788461 49788760 -203467823 + HAL1 LINE L1 1599 1933 -574 821 132 0 59 chr2 49789530 49789666 -203466917 - FLAM_C SINE Alu -5 128 1 203 161 0 0 chr2 49790181 49790212 -203466371 + (CATATA)n Simple_repeat Simple_repeat 6 36 0 600 143 0 10 chr2 49790350 49790448 -203466135 - AluSx SINE Alu -13 299 203 * 741 109 18 0 chr2 49790441 49790551 -203466032 - AluSx SINE Alu -201 112 1 2107 134 0 0 chr2 49790641 49790932 -203465651 + AluSx SINE Alu 1 291 -21 345 263 0 45 chr2 49791069 49791202 -203465381 + C-rich Low_complexity Low_complexity 6 132 0 261 98 0 0 chr2 49791302 49791343 -203465240 + (A)n Simple_repeat Simple_repeat 1 41 0 205 357 77 30 chr2 49791795 49791963 -203464620 + MER5A DNA MER1_type 7 182 -7 26 30 0 0 chr2 49792063 49792096 -203464487 + AT_rich Low_complexity Low_complexity 1 33 0 1266 135 5 16 chr2 49793641 49793834 -203462749 - AluSx SINE Alu -113 199 9 2062 159 0 0 chr2 49793945 49794241 -203462342 + AluSx SINE Alu 1 296 -16 1154 189 14 9 chr2 49794940 49795157 -203461426 - MER20 DNA MER1_type 0 219 2 2128 121 3 3 chr2 49795378 49795675 -203460908 - AluSx SINE Alu -15 297 1 872 157 88 7 chr2 49796023 49796170 -203460413 - AluSg/x SINE Alu -20 292 134 1188 176 212 12 chr2 49796243 49796493 -203460090 - AluSg1 SINE Alu -9 300 1 776 174 0 8 chr2 49796658 49796779 -203459804 - AluJb SINE Alu -10 302 183 809 151 0 0 chr2 49796779 49796898 -203459685 - FLAM_C SINE Alu -7 136 18 2254 94 10 0 chr2 49797120 49797417 -203459166 + AluSq SINE Alu 1 300 -13 986 145 0 13 chr2 49797610 49797769 -203458814 - AluJb SINE Alu -19 293 137 323 271 147 44 chr2 49797769 49797818 -203458765 - L1ME4a LINE L1 -236 5885 5842 1725 176 0 20 chr2 49797818 49798124 -203458459 + AluJo SINE Alu 1 300 -12 323 271 147 44 chr2 49798124 49798325 -203458258 - L1ME4a LINE L1 -279 5842 5609 22 0 0 0 chr2 49799240 49799262 -203457321 + AT_rich Low_complexity Low_complexity 1 22 0 2434 48 14 3 chr2 49799821 49800113 -203456470 - AluY SINE Alu -16 295 1 1588 134 26 34 chr2 49800322 49800591 -203455992 - AluJo SINE Alu -13 299 33 564 87 0 0 chr2 49800604 49800673 -203455910 + AluJ/FRAM SINE Alu 218 286 -26 2297 88 13 7 chr2 49800876 49801182 -203455401 + AluSg SINE Alu 1 308 -2 27 49 0 0 chr2 49801397 49801438 -203455145 + AT_rich Low_complexity Low_complexity 1 41 0 2121 118 14 0 chr2 49802524 49802820 -203453763 - AluSx SINE Alu -12 300 1 2135 102 13 16 chr2 49802956 49803259 -203453324 - AluSp SINE Alu -11 302 1 1873 158 13 23 chr2 49803428 49803731 -203452852 - AluJo SINE Alu -12 300 1 271 224 82 24 chr2 49803994 49804017 -203452566 + MLT1L LTR MaLR 518 538 -77 1992 127 0 51 chr2 49804017 49804332 -203452251 - AluSx SINE Alu -13 299 1 271 224 82 24 chr2 49804332 49804393 -203452190 + MLT1L LTR MaLR 538 607 -8 790 173 39 8 chr2 49804566 49804693 -203451890 - FLAM_A SINE Alu -2 131 1 2340 118 0 0 chr2 49804882 49805243 -203451340 + AluSq SINE Alu 1 361 0 1921 141 39 0 chr2 49805779 49806063 -203450520 + AluSx SINE Alu 1 295 -17 2207 114 7 0 chr2 49806415 49806722 -203449861 + AluSq SINE Alu 1 309 -4 224 147 0 0 chr2 49807208 49807242 -203449341 + MIR SINE MIR 216 249 -13 210 274 20 0 chr2 49807242 49807259 -203449324 + L2 LINE L2 3261 3312 -1 1489 236 90 47 chr2 49807284 49807772 -203448811 + MLT1J LTR MaLR 1 509 -2 423 278 52 5 chr2 49807858 49808007 -203448576 + MIR SINE MIR 37 191 -65 1647 154 37 20 chr2 49808077 49808376 -203448207 + AluJo SINE Alu 1 304 -8 213 316 0 0 chr2 49808470 49808527 -203448056 + MIR3 SINE MIR 131 187 -21 2406 76 3 3 chr2 49808579 49808880 -203447703 - AluSc SINE Alu -8 301 1 1314 246 75 31 chr2 49809263 49809650 -203446933 - MLT1I LTR MaLR -1 408 5 1064 93 0 0 chr2 49810272 49810411 -203446172 + AluSc SINE Alu 162 300 -9 883 230 113 15 chr2 49810435 49810709 -203445874 - HAL1 LINE L1 -1052 1455 1155 1790 190 3 0 chr2 49810719 49811008 -203445575 + HERVL-D LTR ERVL 4079 4368 -1286 * 4791 154 31 29 chr2 49811003 49811810 -203444773 + HERVL-D LTR ERVL 4533 5341 -423 687 204 23 0 chr2 49811810 49811942 -203444641 + HERVL-D LTR ERVL 5544 5678 -86 1057 105 0 7 chr2 49811942 49812085 -203444498 - AluSq/x SINE Alu -170 142 1 628 215 76 23 chr2 49812087 49812259 -203444324 + MLT2D LTR ERVL 102 282 -132 248 125 71 54 chr2 49812263 49812319 -203444264 + MLT2D LTR ERVL 408 464 0 1491 206 97 25 chr2 49812437 49812868 -203443715 + MLT1C LTR MaLR 4 465 -2 279 322 34 40 chr2 49812876 49813053 -203443530 - L1ME LINE L1 -390 5780 5605 1785 203 60 43 chr2 49813122 49813540 -203443043 + MLT1F1 LTR MaLR 7 431 -136 430 297 79 15 chr2 49813605 49813940 -203442643 - L1M3 LINE L1 -691 5489 5127 1194 307 119 45 chr2 49814042 49814344 -203442239 - HAL1 LINE L1 -1426 1081 803 1206 197 102 105 chr2 49814344 49814451 -203442132 + Charlie1b DNA MER1_type 3 109 -2652 1941 113 11 3 chr2 49814451 49814733 -203441850 - AluSq SINE Alu -29 284 1 1206 197 102 105 chr2 49814733 49815147 -203441436 + Charlie1b DNA MER1_type 109 522 -1 1194 307 119 45 chr2 49815147 49815645 -203440938 - HAL1 LINE L1 -1704 803 222 647 284 91 18 chr2 49815678 49815953 -203440630 - HAL1 LINE L1 -2201 306 12 1916 120 0 4 chr2 49816042 49816316 -203440267 + AluSg SINE Alu 1 273 -37 34 24 0 0 chr2 49816324 49816365 -203440218 + AT_rich Low_complexity Low_complexity 1 41 0 451 183 143 8 chr2 49816472 49816598 -203439985 - Looper DNA T2_type -29 1529 1387 1974 150 0 0 chr2 49816661 49816947 -203439636 - AluSx SINE Alu -26 286 1 1050 164 122 57 chr2 49816993 49817208 -203439375 - Looper DNA T2_type -657 901 665 699 184 45 126 chr2 49817208 49817431 -203439152 + MER3 DNA MER1_type 1 205 -4 1050 164 122 57 chr2 49817431 49817477 -203439106 - Looper DNA T2_type -893 665 623 1927 171 118 7 chr2 49817478 49817928 -203438655 - Looper DNA T2_type -1058 500 1 421 180 74 33 chr2 49818077 49818199 -203438384 - MIR SINE MIR -54 208 82 1975 109 39 14 chr2 49818373 49818658 -203437925 + AluSx SINE Alu 1 292 -20 207 277 138 11 chr2 49819147 49819241 -203437342 - L2 LINE L2 -5 3308 3203 2003 169 52 50 chr2 49819707 49819869 -203436714 - Zaphod DNA AcHobo -9 4022 3862 2343 104 0 0 chr2 49819869 49820168 -203436415 - AluSq SINE Alu -14 299 1 2003 169 52 50 chr2 49820168 49820466 -203436117 - Zaphod DNA AcHobo -169 3862 3561 1340 228 70 83 chr2 49820466 49821006 -203435577 + MER34 LTR ERV1 1 533 -9 660 255 38 45 chr2 49821041 49821187 -203435396 - L1MC5 LINE L1 -37 7924 7779 2139 118 3 7 chr2 49821187 49821484 -203435099 - AluSx SINE Alu -16 296 1 660 255 38 45 chr2 49821484 49821604 -203434979 - L1MC5 LINE L1 -182 7779 7660 2187 132 3 0 chr2 49821618 49821928 -203434655 + AluSx SINE Alu 1 311 -1 713 217 17 0 chr2 49821935 49822055 -203434528 + FLAM_A SINE Alu 1 122 -11 240 226 71 24 chr2 49822099 49822183 -203434400 - MER41A LTR ERV1 -90 464 377 2307 106 0 3 chr2 49822304 49822606 -203433977 - AluSq SINE Alu -8 305 5 1490 136 0 25 chr2 49822627 49822862 -203433721 - AluJo SINE Alu -83 229 1 560 239 60 0 chr2 49822869 49823003 -203433580 + L2 LINE L2 3172 3313 0 2137 125 3 3 chr2 49823150 49823454 -203433129 + AluSx SINE Alu 9 312 0 307 271 14 0 chr2 49823517 49823587 -203432996 + L2 LINE L2 3202 3272 0 304 200 0 17 chr2 49824567 49824583 -203432000 + MER3 DNA MER1_type 32 46 -163 366 100 100 17 chr2 49824583 49824643 -203431940 - MER3 DNA MER1_type 0 209 145 1928 116 11 3 chr2 49824643 49824927 -203431656 + AluSq SINE Alu 1 286 -27 2537 180 2 0 chr2 49824943 49825404 -203431179 + L1P LINE L1 4648 5109 -1037 466 133 60 0 chr2 49825504 49825587 -203430996 + AluSg/x SINE Alu 219 306 -4 2395 94 0 0 chr2 49825954 49826261 -203430322 + AluSg SINE Alu 1 307 -3 1233 129 55 5 chr2 49826692 49826893 -203429690 + AluJo SINE Alu 84 294 -18 356 274 93 81 chr2 49826941 49827189 -203429394 + L1MEd LINE L1 996 1333 -1157 1786 187 0 3 chr2 49827639 49827944 -203428639 + AluJb SINE Alu 2 305 -7 2329 56 7 11 chr2 49828018 49828324 -203428259 + AluY SINE Alu 1 305 0 5967 95 15 18 chr2 49829590 49829755 -203426828 + L1PA14 LINE L1 5277 5441 -720 2241 132 0 0 chr2 49829755 49830066 -203426517 + AluSx SINE Alu 1 311 -1 5967 95 15 18 chr2 49830066 49830788 -203425795 + L1PA14 LINE L1 5441 6161 0 4279 76 38 2 chr2 49830796 49831404 -203425179 + L1M1 LINE L1 2417 3046 -4519 229 229 21 0 chr2 49831521 49831569 -203425014 - AluJ/monomer SINE Alu -84 49 1 2293 115 0 0 chr2 49831625 49831920 -203424663 - AluSp SINE Alu -18 295 1 1791 159 0 19 chr2 49832529 49832838 -203423745 + AluSx SINE Alu 1 303 -9 1541 156 24 21 chr2 49833008 49833296 -203423287 + AluJo SINE Alu 5 293 -19 2263 117 3 0 chr2 49833392 49833701 -203422882 + AluSp SINE Alu 1 310 -3 311 297 39 8 chr2 49833722 49833850 -203422733 - MIR SINE MIR -67 195 64 1516 146 9 13 chr2 49834009 49834242 -203422341 - AluJb SINE Alu -80 232 1 218 333 11 32 chr2 49834905 49834998 -203421585 - MIR SINE MIR -112 150 60 194 0 39 0 chr2 49835057 49835083 -203421500 + (TTTTTG)n Simple_repeat Simple_repeat 3 29 0 207 313 134 27 chr2 49835156 49835268 -203421315 - L2 LINE L2 -27 3245 3122 2167 116 3 0 chr2 49835800 49836094 -203420489 - AluSx SINE Alu -13 299 5 242 248 58 102 chr2 49836683 49836820 -203419763 - L2 LINE L2 -16 3297 3167 958 127 12 61 chr2 49836828 49836993 -203419590 - MER6A DNA MER2_type 0 605 449 25 0 0 0 chr2 49836995 49837020 -203419563 + AT_rich Low_complexity Low_complexity 1 25 0 711 136 0 10 chr2 49837034 49837137 -203419446 - FLAM_C SINE Alu -28 115 14 2444 155 86 0 chr2 49837146 49837353 -203419230 - MER6A DNA MER2_type -409 456 268 360 0 0 0 chr2 49837353 49837393 -203419190 + (CA)n Simple_repeat Simple_repeat 2 41 0 2444 155 86 0 chr2 49837393 49837605 -203418978 - MER6A DNA MER2_type -597 268 1 369 244 29 91 chr2 49837611 49837820 -203418763 - L2 LINE L2 -170 3143 2948 192 77 0 0 chr2 49837880 49837906 -203418677 + (T)n Simple_repeat Simple_repeat 1 26 0 307 222 14 0 chr2 49837916 49837988 -203418595 - LTR30 LTR ERV1 -98 624 552 240 214 48 60 chr2 49838147 49838231 -203418352 - MER74A LTR ERVL -377 181 99 198 118 0 0 chr2 49838440 49838474 -203418109 + (TTA)n Simple_repeat Simple_repeat 3 36 0 622 209 7 74 chr2 49838483 49838631 -203417952 + MER58A DNA MER1_type 1 138 0 2189 116 3 0 chr2 49839275 49839567 -203417016 + AluSx SINE Alu 3 295 -17 200 57 0 29 chr2 49839722 49839757 -203416826 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1628 208 7 0 chr2 49840097 49840390 -203416193 + AluJb SINE Alu 1 295 -17 556 207 33 0 chr2 49840736 49840857 -203415726 - AluSp SINE Alu -187 126 2 424 256 111 2 chr2 49841909 49842073 -203414510 + MIR SINE MIR 2 180 -62 707 124 35 0 chr2 49842074 49842187 -203414396 + L1MB4 LINE L1 6058 6174 -6 933 124 13 33 chr2 49842205 49842358 -203414225 + FRAM SINE Alu 20 169 -7 259 304 0 0 chr2 49842375 49842444 -203414139 + MIR SINE MIR 190 258 -4 520 270 130 100 chr2 49842464 49843012 -203413571 - MLT1K LTR MaLR -23 565 2 282 318 64 27 chr2 49843841 49843951 -203412632 + L2 LINE L2 3141 3254 -18 1801 171 0 23 chr2 49844221 49844530 -203412053 - AluJo SINE Alu -10 302 1 868 176 0 11 chr2 49845332 49845514 -203411069 + GA-rich Low_complexity Low_complexity 1 180 0 234 91 0 0 chr2 49846090 49846123 -203410460 + (T)n Simple_repeat Simple_repeat 1 33 0 198 91 0 0 chr2 49846139 49846172 -203410411 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 1744 97 59 69 chr2 49846394 49846684 -203409899 - AluSg SINE Alu -23 287 1 1322 137 175 0 chr2 49846884 49847118 -203409465 - AluSx SINE Alu -37 275 1 355 262 78 0 chr2 49847708 49847811 -203408772 - L2 LINE L2 -28 3285 3175 2169 123 0 0 chr2 49848428 49848720 -203407863 + AluSx SINE Alu 1 292 -20 2599 42 0 10 chr2 49848952 49849263 -203407320 + AluY SINE Alu 1 308 -3 299 214 32 32 chr2 49850286 49850421 -203406162 + L1ME4a LINE L1 1179 6023 -37 510 213 53 0 chr2 49850473 49850567 -203406016 - FLAM_A SINE Alu -43 99 1 225 0 0 0 chr2 49850600 49850612 -203405971 + (TG)n Simple_repeat Simple_repeat 1 37 0 225 0 0 0 chr2 49850612 49850637 -203405946 + (TG)n Simple_repeat Simple_repeat 2 26 0 1762 152 16 0 chr2 49850886 49851202 -203405381 - L1MB7 LINE L1 -21 6163 5843 1583 183 26 64 chr2 49851925 49852313 -203404270 - MLT1A2 LTR MaLR -1 373 1 1609 137 78 42 chr2 49852935 49853219 -203403364 - AluJb SINE Alu -18 294 1 1853 149 3 3 chr2 49853644 49853958 -203402625 - AluJb SINE Alu 0 314 1 1703 217 77 137 chr2 49854036 49854871 -203401712 + L2 LINE L2 1885 2669 -645 2385 79 3 0 chr2 49855069 49855361 -203401222 + AluSp SINE Alu 11 303 -10 1196 190 72 21 chr2 49857909 49858026 -203398557 + AluSx SINE Alu 2 112 -190 198 0 0 0 chr2 49858026 49858048 -203398535 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 1196 190 72 21 chr2 49858048 49858209 -203398374 + AluSx SINE Alu 112 294 -8 569 127 0 0 chr2 49858266 49858345 -203398238 + AluSg/x SINE Alu 213 291 -19 853 227 81 5 chr2 49858392 49858577 -203398006 - MIR SINE MIR 0 262 64 17157 42 5 0 chr2 49858702 49861101 -203395482 + L1PA5 LINE L1 3146 5557 -597 1884 64 8 15 chr2 49861268 49861532 -203395051 + L1PA5 LINE L1 5893 6154 0 331 320 0 29 chr2 49862516 49862619 -203393964 + MIR3 SINE MIR 100 199 -9 457 242 30 10 chr2 49863523 49863622 -203392961 - MER91B DNA MER1_type 0 190 90 320 256 90 0 chr2 49863639 49863717 -203392866 - MER91B DNA MER1_type -60 130 46 215 247 183 11 chr2 49864370 49864463 -203392120 - MIR SINE MIR -84 124 16 26 0 0 0 chr2 49864782 49864808 -203391775 + AT_rich Low_complexity Low_complexity 1 26 0 27 73 0 0 chr2 49865533 49865588 -203390995 + GC_rich Low_complexity Low_complexity 1 55 0 222 37 0 0 chr2 49865951 49865978 -203390605 + (CGGG)n Simple_repeat Simple_repeat 2 28 0 406 75 30 0 chr2 49866755 49866822 -203389761 + (TG)n Simple_repeat Simple_repeat 2 70 0 207 167 0 0 chr2 49868780 49868822 -203387761 + (TG)n Simple_repeat Simple_repeat 2 43 0 1954 130 3 7 chr2 49869141 49869433 -203387150 + AluSg SINE Alu 1 291 -19 496 155 0 0 chr2 49869698 49869782 -203386801 + AluS SINE Alu 224 307 -3 360 200 0 0 chr2 49870177 49870257 -203386326 + (TA)n Simple_repeat Simple_repeat 2 81 0 519 281 0 0 chr2 49870330 49870501 -203386082 + (TA)n Simple_repeat Simple_repeat 1 171 0 315 279 11 33 chr2 49870521 49870704 -203385879 + (TATATG)n Simple_repeat Simple_repeat 2 180 0 601 122 37 9 chr2 49871657 49871764 -203384819 - MER41B LTR ERV1 -88 547 438 2857 183 51 102 chr2 49871769 49872829 -203383754 - Zaphod DNA AcHobo -487 3544 2539 416 245 0 20 chr2 49872837 49872939 -203383644 - Zaphod DNA AcHobo -3931 100 1 480 234 76 10 chr2 49872984 49873161 -203383422 - MIR SINE MIR -31 231 32 2179 68 39 0 chr2 49873175 49873456 -203383127 - AluY SINE Alu -1 310 19 2141 99 7 3 chr2 49873459 49873752 -203382831 - AluSc SINE Alu -15 294 1 1777 123 56 11 chr2 49874445 49874713 -203381870 + AluJb SINE Alu 33 312 0 24 96 0 0 chr2 49874730 49874803 -203381780 + AT_rich Low_complexity Low_complexity 1 73 0 279 288 100 0 chr2 49875047 49875127 -203381456 + L2 LINE L2 3136 3223 -49 2120 122 19 19 chr2 49875541 49875853 -203380730 - AluSx SINE Alu 0 312 1 4828 158 17 19 chr2 49876028 49876998 -203379585 + L1MB3 LINE L1 5215 6181 -2 2327 109 0 0 chr2 49877007 49877310 -203379273 + AluSx SINE Alu 1 303 -9 276 250 74 46 chr2 49877345 49877453 -203379130 - MIR SINE MIR -50 212 102 15417 152 18 7 chr2 49877571 49879880 -203376703 + L1MA1 LINE L1 3011 5293 -2428 2115 123 0 0 chr2 49879880 49880213 -203376370 + AluSx SINE Alu 1 333 0 15417 152 18 7 chr2 49880213 49882549 -203374034 + L1MA1 LINE L1 5293 7717 -4 1132 200 43 114 chr2 49882551 49883067 -203373516 - L1MCa LINE L1 -4483 1943 1465 2282 53 3 3 chr2 49883398 49883719 -203372864 - AluY SINE Alu 0 321 1 3734 125 42 26 chr2 49884705 49885329 -203371254 + MER51A LTR ERV1 1 634 0 192 125 0 0 chr2 49885451 49885483 -203371100 + (TTCA)n Simple_repeat Simple_repeat 3 34 0 302 193 48 24 chr2 49885489 49885572 -203371011 - L2 LINE L2 -5 3308 3224 278 268 0 10 chr2 49885622 49885719 -203370864 - L1M4 LINE L1 -1334 4812 4717 2284 114 0 0 chr2 49885720 49886027 -203370556 - AluSx SINE Alu -5 307 1 21 0 0 0 chr2 49886027 49886048 -203370535 + AT_rich Low_complexity Low_complexity 1 21 0 435 201 75 101 chr2 49886212 49886371 -203370212 + MER5A DNA MER1_type 34 188 -1 3444 112 10 4 chr2 49886557 49887068 -203369515 + MER75 DNA T2_type 1 514 0 895 185 6 0 chr2 49887983 49888145 -203368438 + AluSg/x SINE Alu 134 296 -16 22 0 0 0 chr2 49888145 49888167 -203368416 + AT_rich Low_complexity Low_complexity 1 22 0 2889 179 35 4 chr2 49888168 49889135 -203367448 - L1MB8 LINE L1 -323 5855 4859 1617 161 16 51 chr2 49889240 49889551 -203367032 - AluJo SINE Alu -11 301 2 619 208 101 6 chr2 49889626 49889785 -203366798 + MER5B DNA MER1_type 2 175 -3 357 305 33 20 chr2 49889945 49890096 -203366487 - LTR67 LTR ERVL -336 221 69 377 207 18 18 chr2 49890188 49890299 -203366284 + L1P LINE L1 3439 3549 -2597 327 163 10 0 chr2 49890411 49890479 -203366104 - Alu SINE Alu -254 47 3 1736 111 63 19 chr2 49890493 49890783 -203365800 + AluSq SINE Alu 1 302 0 1169 245 134 21 chr2 49890916 49891388 -203365195 - L1M2 LINE L1 -459 5832 5307 1227 144 90 4 chr2 49891536 49891792 -203364791 - L1MB1 LINE L1 -131 6037 5760 1531 179 4 8 chr2 49891799 49892062 -203364521 - AluJb SINE Alu -17 295 34 23 0 0 0 chr2 49892309 49892332 -203364251 + AT_rich Low_complexity Low_complexity 1 23 0 305 307 123 41 chr2 49892383 49892725 -203363858 - L1M4 LINE L1 -3603 2543 2174 2182 119 3 0 chr2 49892771 49893073 -203363510 + AluSg SINE Alu 1 303 -7 289 250 24 73 chr2 49893455 49893553 -203363030 - HAL1b LINE L1 -519 829 741 2091 119 10 17 chr2 49893553 49893846 -203362737 - AluSx SINE Alu -21 291 1 289 250 24 73 chr2 49893846 49893911 -203362672 - HAL1b LINE L1 -607 741 674 344 306 97 0 chr2 49893981 49894125 -203362458 - HAL1b LINE L1 -811 537 380 1717 168 11 3 chr2 49894461 49894747 -203361836 - AluJb SINE Alu -24 288 1 2156 107 13 0 chr2 49895740 49896038 -203360545 + AluSx SINE Alu 1 302 -10 563 163 10 0 chr2 49897112 49897210 -203359373 + AluS SINE Alu 2 100 -213 1518 134 72 14 chr2 49897562 49897839 -203358744 + AluSx SINE Alu 11 303 -9 252 245 38 38 chr2 49898252 49898358 -203358225 + L1MC4a LINE L1 5524 5629 -492 2326 62 17 3 chr2 49898580 49898872 -203357711 + AluSg SINE Alu 2 297 -13 472 259 103 38 chr2 49898895 49899157 -203357426 + L1MC4a LINE L1 5653 5931 -1877 518 170 9 57 chr2 49899191 49899297 -203357286 + AluJo SINE Alu 87 187 -125 2064 125 7 0 chr2 49899360 49899648 -203356935 + AluSp SINE Alu 4 293 -20 1232 191 31 41 chr2 49899800 49899929 -203356654 + AluJo SINE Alu 3 132 -180 1910 158 14 0 chr2 49899929 49900214 -203356369 + AluJb SINE Alu 1 289 -23 1232 191 31 41 chr2 49900214 49900377 -203356206 + AluJo SINE Alu 132 292 -20 201 216 0 0 chr2 49900625 49900662 -203355921 + MIR SINE MIR 28 64 -144 192 376 64 0 chr2 49901540 49901681 -203354902 - L3 LINE CR1 -1124 453 304 1085 194 46 0 chr2 49902384 49902474 -203354109 - AluJo SINE Alu -95 217 133 234 0 0 0 chr2 49902474 49902500 -203354083 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1085 194 46 0 chr2 49902500 49902605 -203353978 - AluJo SINE Alu -179 133 13 2016 130 7 3 chr2 49902873 49903173 -203353410 + AluSx SINE Alu 1 301 -11 1628 177 0 21 chr2 49903184 49903466 -203353117 - AluJo SINE Alu -28 284 9 4826 168 29 8 chr2 49903496 49904566 -203352017 - L1MB1 LINE L1 -24 6144 5053 1252 159 5 10 chr2 49905304 49905538 -203351045 + AluSg/x SINE Alu 84 316 0 191 200 0 18 chr2 49905672 49905727 -203350856 + (TA)n Simple_repeat Simple_repeat 1 54 0 22 0 0 0 chr2 49907322 49907344 -203349239 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 49907489 49907511 -203349072 + AT_rich Low_complexity Low_complexity 1 22 0 1470 218 58 37 chr2 49907719 49908150 -203348433 + L1ME3A LINE L1 5693 6132 -38 2103 106 3 17 chr2 49908220 49908513 -203348070 - AluSg SINE Alu -21 289 1 1898 142 3 19 chr2 49908840 49909150 -203347433 - AluJb SINE Alu -7 305 1 2199 131 0 6 chr2 49909933 49910246 -203346337 + AluSx SINE Alu 1 311 -1 21 36 0 0 chr2 49911460 49911488 -203345095 + AT_rich Low_complexity Low_complexity 1 28 0 2635 46 0 0 chr2 49911511 49911815 -203344768 + AluY SINE Alu 1 304 -7 421 315 146 9 chr2 49911940 49912159 -203344424 - MIR SINE MIR -8 254 6 1011 139 0 0 chr2 49962703 49962847 -203293736 - AluSg/x SINE Alu -45 265 122 610 226 17 6 chr2 49962847 49963024 -203293559 - L1M4 LINE L1 -859 5287 5109 * 1537 213 85 20 chr2 49963020 49963419 -203293164 - L1MDa LINE L1 -6114 426 2 306 312 19 38 chr2 49963810 49963967 -203292616 - L1MEc LINE L1 -5303 1093 940 1970 205 68 48 chr2 49964124 49964728 -203291855 - L1MC4 LINE L1 -132 7910 7295 332 261 17 17 chr2 49964730 49964849 -203291734 - L1MEc LINE L1 -4602 1794 1676 6815 70 6 0 chr2 49964950 49966206 -203290377 + L1PA6 LINE L1 4893 6153 -1 353 287 0 0 chr2 49966216 49966303 -203290280 - L1MC4 LINE L1 -1342 6700 6614 2210 142 3 8 chr2 49966324 49966698 -203289885 + L1PB1 LINE L1 5777 6148 -3 377 304 18 9 chr2 49966723 49966835 -203289748 - MER5A DNA MER1_type -11 178 66 2167 125 3 3 chr2 49967183 49967495 -203289088 - AluSx SINE Alu 0 312 1 234 0 0 0 chr2 49967577 49967603 -203288980 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1961 138 0 0 chr2 49967612 49967888 -203288695 - AluSx SINE Alu -36 276 1 788 145 0 51 chr2 49969287 49969425 -203287158 + FLAM_C SINE Alu 1 131 -2 681 263 157 7 chr2 49969550 49969879 -203286704 + L1ME4a LINE L1 5459 5834 -287 392 265 118 21 chr2 49970281 49970439 -203286144 - MIR3 SINE MIR -23 185 7 237 219 144 56 chr2 49970999 49971159 -203285424 - L1MC5 LINE L1 -37 7924 7751 370 252 39 32 chr2 49971216 49971371 -203285212 - L1MC5 LINE L1 -298 7663 7508 4393 140 24 38 chr2 49971404 49971439 -203285144 - L1MB5 LINE L1 -8 6166 6132 1992 151 7 0 chr2 49971439 49971737 -203284846 - AluSq SINE Alu -13 300 1 4393 140 24 38 chr2 49971737 49972122 -203284461 - L1MB5 LINE L1 -42 6132 5743 2178 120 41 19 chr2 49972122 49972489 -203284094 - THE1C LTR MaLR 0 375 1 4393 140 24 38 chr2 49972489 49972958 -203283625 - L1MB5 LINE L1 -431 5743 5289 438 226 40 73 chr2 49972958 49973206 -203283377 - L1MC5 LINE L1 -449 7512 7273 27 29 0 0 chr2 49973501 49973535 -203283048 + AT_rich Low_complexity Low_complexity 1 34 0 5990 115 47 27 chr2 49974471 49975564 -203281019 + Tigger3b DNA MER2_type 1 1114 -117 390 355 77 0 chr2 49975580 49975763 -203280820 + MIR SINE MIR 54 250 -12 487 229 29 0 chr2 49976902 49977007 -203279576 + Tigger3b DNA MER2_type 1125 1232 0 381 43 0 0 chr2 49977028 49977075 -203279508 + (CAT)n Simple_repeat Simple_repeat 1 47 0 217 203 72 29 chr2 49978729 49978798 -203277785 + MIR SINE MIR 93 164 -98 572 139 59 10 chr2 49978801 49978902 -203277681 + FLAM_A SINE Alu 2 107 -35 192 77 0 0 chr2 49978914 49978940 -203277643 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 399 260 111 43 chr2 49980157 49980507 -203276076 - L1MC4a LINE L1 -104 6017 5641 735 164 0 0 chr2 49980525 49980641 -203275942 + AluSc SINE Alu 154 269 -40 1083 136 27 0 chr2 49980741 49980925 -203275658 - L1MC4a LINE L1 -569 5615 5427 1929 160 0 3 chr2 49980932 49981226 -203275357 - AluJb SINE Alu -19 293 1 618 348 39 4 chr2 49981597 49981827 -203274756 + MIR SINE MIR 19 256 -6 1372 157 0 5 chr2 49981908 49982131 -203274452 + L1PA15 LINE L1 5938 6159 -6 294 230 54 27 chr2 49983111 49983185 -203273398 - L2 LINE L2 0 3313 3238 288 226 8 120 chr2 49983276 49983409 -203273174 + MLT1H LTR MaLR 432 549 0 236 324 39 29 chr2 49983419 49983521 -203273062 - L2 LINE L2 -534 2780 2678 515 293 214 34 chr2 49983665 49984253 -203272330 - L2 LINE L2 -640 2674 1981 189 74 0 0 chr2 49984263 49984290 -203272293 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2021 122 7 0 chr2 49984292 49984571 -203272012 - AluSx SINE Alu -31 281 1 490 319 58 24 chr2 49984656 49984863 -203271720 + MIR SINE MIR 49 262 0 402 339 41 57 chr2 49984870 49985186 -203271397 - L2 LINE L2 -1383 1931 1621 1734 144 72 10 chr2 49985349 49985641 -203270942 - AluSg SINE Alu 0 310 1 24 53 0 0 chr2 49986244 49986282 -203270301 + AT_rich Low_complexity Low_complexity 1 38 0 265 274 14 16 chr2 49986627 49986708 -203269875 - MIR SINE MIR -41 167 87 1881 134 3 7 chr2 49988525 49988838 -203267745 - AluSx SINE Alu 0 312 1 777 255 115 42 chr2 49988881 49989461 -203267122 + MLT1F1 LTR MaLR 3 595 0 488 253 83 27 chr2 49989481 49989781 -203266802 + L1MEd LINE L1 941 1257 -4862 1509 221 72 10 chr2 49990025 49990390 -203266193 + L1ME1 LINE L1 5735 6129 -37 1847 146 31 11 chr2 49990390 49990677 -203265906 + AluSx SINE Alu 1 293 -19 1509 221 72 10 chr2 49990677 49990714 -203265869 + L1ME1 LINE L1 6129 6162 -4 321 330 17 17 chr2 49990761 49990876 -203265707 + HAL1 LINE L1 1489 1603 -904 738 247 21 21 chr2 49990878 49991064 -203265519 - MER5A DNA MER1_type -1 188 3 2982 239 58 22 chr2 49991511 49992404 -203264179 + MER97c DNA MER1_type? 2 938 -152 180 77 0 0 chr2 49992404 49992430 -203264153 + (CATA)n Simple_repeat Simple_repeat 1 26 0 2982 239 58 22 chr2 49992430 49992561 -203264022 + MER97c DNA MER1_type? 938 1063 -27 2174 117 16 13 chr2 49993156 49993464 -203263119 + AluSx SINE Alu 1 309 -3 2482 131 58 7 chr2 49993718 49994168 -203262415 - L1MD1 LINE L1 0 6242 5770 5455 51 4 6 chr2 49994172 49994856 -203261727 - L1PA8 LINE L1 -2 6170 5488 2085 202 14 33 chr2 49994856 49995304 -203261279 - L1MD1 LINE L1 -470 5772 5334 2324 105 6 10 chr2 49995304 49995617 -203260966 - AluSx SINE Alu 0 312 1 2085 202 14 33 chr2 49995617 49995688 -203260895 - L1MD1 LINE L1 -908 5334 5263 1722 126 20 12 chr2 49995813 49996060 -203260523 - AluSx SINE Alu -63 249 1 303 186 23 23 chr2 49996102 49996188 -203260395 - HAL1 LINE L1 -175 2332 2247 25 0 0 0 chr2 49996214 49996239 -203260344 + AT_rich Low_complexity Low_complexity 1 25 0 248 268 57 25 chr2 49996302 49996459 -203260124 - HAL1b LINE L1 -437 911 750 807 255 39 10 chr2 49997094 49997298 -203259285 + MIR SINE MIR 53 262 0 183 290 145 16 chr2 49997670 49997732 -203258851 - L2 LINE L2 -78 3194 3125 1341 198 4 8 chr2 49998406 49998653 -203257930 - AluJo SINE Alu -66 246 1 1956 222 17 14 chr2 49998653 49999192 -203257391 + MER63D DNA MER1_type 185 790 -271 398 225 81 12 chr2 49999216 49999361 -203257222 - L1M4 LINE L1 -754 5392 5242 393 264 94 9 chr2 49999361 49999467 -203257116 + L2 LINE L2 3193 3307 -6 362 271 60 26 chr2 49999467 49999733 -203256850 - L1M4 LINE L1 -904 5242 4968 853 250 60 0 chr2 49999962 50000178 -203256405 - MIR SINE MIR -27 235 7 1634 149 3 81 chr2 50000222 50000557 -203256026 - AluJo SINE Alu -3 309 1 795 167 0 0 chr2 50000561 50000687 -203255896 - FLAM_C SINE Alu -7 126 1 404 330 53 34 chr2 50000747 50001011 -203255572 - L1M4 LINE L1 -1501 4645 4377 210 71 0 0 chr2 50001210 50001238 -203255345 + (TTCC)n Simple_repeat Simple_repeat 1 28 0 25 0 0 0 chr2 50001445 50001470 -203255113 + AT_rich Low_complexity Low_complexity 1 25 0 267 318 23 35 chr2 50001715 50001976 -203254607 - L1M4 LINE L1 -2258 3888 3631 5389 209 15 13 chr2 50001996 50003489 -203253094 + L1 LINE L1 1945 3439 -2707 23 54 0 0 chr2 50004009 50004046 -203252537 + AT_rich Low_complexity Low_complexity 1 37 0 2244 105 3 0 chr2 50004340 50004662 -203251921 + AluSx SINE Alu 1 312 0 2001 92 0 78 chr2 50005575 50005934 -203250649 + AluSx SINE Alu 1 335 0 231 242 16 0 chr2 50006271 50006333 -203250250 + CT-rich Low_complexity Low_complexity 1 63 0 368 264 43 53 chr2 50006333 50006541 -203250042 - L1ME3A LINE L1 0 6170 5965 1144 243 62 52 chr2 50006658 50007194 -203249389 - L1MC5 LINE L1 -451 7510 6970 1132 164 82 39 chr2 50007263 50007396 -203249187 - L1MB5 LINE L1 0 6174 6048 2977 137 11 4 chr2 50007396 50007865 -203248718 - MER101 LTR ERV1 0 474 3 1132 164 82 39 chr2 50007865 50008011 -203248572 - L1MB5 LINE L1 -126 6048 5883 761 240 85 73 chr2 50008010 50008518 -203248065 - L1MC5 LINE L1 -854 6954 6476 * 420 300 103 43 chr2 50008646 50009113 -203247470 - HAL1b LINE L1 -515 833 339 805 154 6 36 chr2 50009114 50009481 -203247102 + CT-rich Low_complexity Low_complexity 1 355 0 503 282 51 78 chr2 50009490 50009681 -203246902 - HAL1b LINE L1 -1027 321 137 1800 151 6 41 chr2 50009681 50009998 -203246585 - AluJo SINE Alu -6 306 1 503 282 51 78 chr2 50009998 50010061 -203246522 - HAL1b LINE L1 -1211 137 74 5619 205 39 9 chr2 50010377 50011308 -203245275 + Charlie1a DNA MER1_type 43 1028 -1733 2040 80 45 0 chr2 50011308 50011572 -203245011 + AluSc SINE Alu 24 299 -10 5619 205 39 9 chr2 50011572 50012013 -203244570 + Charlie1a DNA MER1_type 1028 1455 0 491 308 131 4 chr2 50012431 50012668 -203243915 - L1M4 LINE L1 -2988 3394 3128 2848 199 52 45 chr2 50012669 50013590 -203242993 + MER69 DNA AcHobo 1596 2523 -3 547 291 80 34 chr2 50013788 50014145 -203242438 + L1MC4a LINE L1 4909 5319 -1002 2261 107 3 0 chr2 50014145 50014444 -203242139 + AluSp SINE Alu 1 300 -13 547 291 80 34 chr2 50014444 50014712 -203241871 + L1MC4a LINE L1 5319 5573 -748 597 284 60 20 chr2 50014722 50014948 -203241635 + L1MC4a LINE L1 5614 5852 -1956 1380 187 74 59 chr2 50014948 50015338 -203241245 + MSTD LTR MaLR 1 396 0 597 284 60 20 chr2 50015338 50015361 -203241222 + L1MC4a LINE L1 5852 5873 -1935 698 314 45 8 chr2 50016070 50016312 -203240271 + MIR SINE MIR 12 262 0 2162 147 0 0 chr2 50018303 50018615 -203237968 - AluSx SINE Alu 0 312 1 719 275 58 52 chr2 50018968 50019332 -203237251 + LTR67 LTR ERVL 101 466 -91 2479 143 56 49 chr2 50019353 50019641 -203236942 - L1MB8 LINE L1 -6 6172 5877 366 61 0 0 chr2 50019641 50019690 -203236893 + (TG)n Simple_repeat Simple_repeat 1 49 0 2479 143 56 49 chr2 50019690 50019933 -203236650 - L1MB8 LINE L1 -301 5877 5637 198 0 0 0 chr2 50021021 50021043 -203235540 + (T)n Simple_repeat Simple_repeat 1 22 0 1610 169 0 4 chr2 50021614 50021874 -203234709 + AluSx SINE Alu 53 311 -1 1727 170 4 0 chr2 50021936 50022206 -203234377 + AluSx SINE Alu 35 305 -7 565 277 69 18 chr2 50022214 50022374 -203234209 - L1MEc LINE L1 -4711 1673 1492 1478 173 118 7 chr2 50022374 50022645 -203233938 - AluSg1 SINE Alu -8 301 1 565 277 69 18 chr2 50022645 50022758 -203233825 - L1MEc LINE L1 -4892 1492 1386 * 2774 205 45 8 chr2 50022748 50023505 -203233078 - L1M4c LINE L1 -3067 3890 3106 1781 252 57 72 chr2 50023585 50024234 -203232349 - L1M4c LINE L1 -4342 2796 2139 2551 48 0 19 chr2 50024234 50024546 -203232037 - AluY SINE Alu -4 307 2 1781 252 57 72 chr2 50024546 50025196 -203231387 - L1M4c LINE L1 -4999 2139 1376 670 178 24 6 chr2 50025205 50025374 -203231209 + CT-rich Low_complexity Low_complexity 1 172 0 1888 155 47 0 chr2 50025395 50025692 -203230891 - AluJb SINE Alu -1 311 1 305 161 0 32 chr2 50025904 50025966 -203230617 - L1M4c LINE L1 -5667 1188 1129 198 0 0 0 chr2 50026273 50026295 -203230288 + (T)n Simple_repeat Simple_repeat 1 22 0 279 283 72 14 chr2 50026519 50026657 -203229926 - L1M4c LINE L1 -6702 157 12 1560 297 80 27 chr2 50026667 50026936 -203229647 - L1MEc LINE L1 -5571 992 739 5470 94 64 8 chr2 50026936 50027893 -203228690 - L1PA11 LINE L1 0 6174 5157 1560 297 80 27 chr2 50027893 50028371 -203228212 - L1MEc LINE L1 -5824 739 205 278 311 65 115 chr2 50028374 50028696 -203227887 - L2 LINE L2 -571 2743 2438 743 154 32 0 chr2 50029521 50029644 -203226939 - MLT1C LTR MaLR -4 463 337 1039 220 37 27 chr2 50029721 50030021 -203226562 - MLT1C LTR MaLR -123 344 42 2612 32 3 13 chr2 50030031 50030345 -203226238 - AluY SINE Alu 0 311 1 251 176 39 0 chr2 50030345 50030396 -203226187 - MLT1C LTR MaLR -412 55 3 827 213 0 18 chr2 50030524 50030688 -203225895 + FRAM SINE Alu 1 161 -5 3423 245 60 29 chr2 50031713 50032714 -203223869 + ERVL-F LTR ERVL 4592 5633 -131 957 231 61 5 chr2 50032714 50032926 -203223657 + MER58A DNA MER1_type 1 224 0 3423 245 60 29 chr2 50032926 50033055 -203223528 + ERVL-F LTR ERVL 5633 5757 -7 2325 198 173 9 chr2 50033058 50033310 -203223273 + MLT2F LTR ERVL 5 214 -449 423 38 0 0 chr2 50033310 50033363 -203223220 + (TG)n Simple_repeat Simple_repeat 1 53 0 2325 198 173 9 chr2 50033363 50033676 -203222907 + MLT2F LTR ERVL 214 663 0 723 282 108 32 chr2 50033734 50034199 -203222384 - L1M4 LINE L1 -3311 2835 2336 617 268 79 0 chr2 50034692 50034882 -203221701 - MIR SINE MIR -56 206 2 2816 123 79 13 chr2 50036275 50036846 -203219737 - MER4B LTR ERV1 -5 774 1 4250 75 6 0 chr2 50036880 50037430 -203219153 - MER41A LTR ERV1 -1 553 1 9134 78 29 1 chr2 50037430 50038723 -203217860 - MER41A-int LTR ERV1 -2 5944 4616 35651 53 2 3 chr2 50038723 50044259 -203212324 - L1PA5 LINE L1 0 6154 623 687 95 0 0 chr2 50044257 50044352 -203212231 - L1PA5 LINE L1 -6048 98 4 * 2399 82 0 13 chr2 50044360 50044665 -203211918 - AluY SINE Alu -10 301 1 5305 117 53 57 chr2 50044666 50045436 -203211147 - MER41A-int LTR ERV1 -1203 3961 3752 1737 75 9 9 chr2 50045436 50045663 -203210920 - AluY SINE Alu -3 308 82 5305 117 53 57 chr2 50045663 50046738 -203209845 - MER41A-int LTR ERV1 -1412 3752 2675 4079 111 15 5 chr2 50046725 50047339 -203209244 - MER41A-int LTR ERV1 -5326 620 1 * 4086 75 18 0 chr2 50047425 50047969 -203208614 - MER41A LTR ERV1 0 554 1 754 258 20 20 chr2 50048439 50048637 -203207946 + L2 LINE L2 3116 3313 0 705 241 59 35 chr2 50049124 50049618 -203206965 - MLT1G LTR MaLR -7 583 11 253 268 0 0 chr2 50050007 50050078 -203206505 + LTR67 LTR ERVL 485 555 -2 223 282 42 14 chr2 50050219 50050290 -203206293 + MIR SINE MIR 165 237 -25 521 306 0 20 chr2 50050511 50050658 -203205925 + L2 LINE L2 2552 2695 -619 1114 273 11 15 chr2 50050936 50051495 -203205088 - MLT2E LTR ERVL 0 628 39 1137 240 148 6 chr2 50051736 50052074 -203204509 - LTR16A1 LTR ERVL 0 457 72 1992 166 15 51 chr2 50052568 50052960 -203203623 - MLT1F1 LTR MaLR 0 567 190 573 216 63 87 chr2 50052960 50053214 -203203369 + LTR1B LTR ERV1 1 248 -578 811 233 22 0 chr2 50053258 50053438 -203203145 - MLT1F1 LTR MaLR -376 191 8 229 317 61 12 chr2 50053647 50053729 -203202854 + MIR SINE MIR 22 107 -155 652 329 163 23 chr2 50053747 50054825 -203201758 - L2 LINE L2 -37 3235 1982 262 278 78 0 chr2 50054839 50054929 -203201654 + MIR SINE MIR 139 235 -27 2164 120 0 0 chr2 50055182 50055501 -203201082 - AluSx SINE Alu 0 319 1 261 0 0 0 chr2 50055708 50055737 -203200846 + (TG)n Simple_repeat Simple_repeat 2 30 0 238 327 60 27 chr2 50059258 50059408 -203197175 + MIR3 SINE MIR 45 199 -9 1661 256 97 31 chr2 50060896 50061411 -203195172 - MLT1H1 LTR MaLR -6 549 1 313 278 43 35 chr2 50061906 50062021 -203194562 - MIR SINE MIR -121 141 26 651 280 75 25 chr2 50062469 50062748 -203193835 - LTR16B LTR ERVL -137 327 35 298 280 0 40 chr2 50063092 50063192 -203193391 + L2 LINE L2 3210 3305 -8 265 293 226 11 chr2 50063261 50063548 -203193035 + L2 LINE L2 2314 2662 -652 412 177 25 0 chr2 50063583 50063662 -203192921 + MER96 DNA MER1_type? 4 84 -91 2089 115 3 3 chr2 50063698 50063984 -203192599 + AluSx SINE Alu 6 291 -21 378 286 50 8 chr2 50064090 50064209 -203192374 - MER5A DNA MER1_type 0 189 66 2223 99 0 3 chr2 50064419 50064713 -203191870 - AluSc SINE Alu -16 293 1 214 246 77 31 chr2 50065133 50065198 -203191385 + L2 LINE L2 3246 3313 0 626 253 22 33 chr2 50065287 50065469 -203191114 - MER5A DNA MER1_type -8 181 2 1782 198 135 44 chr2 50066078 50066553 -203190030 - MLT2B1 LTR ERVL -2 518 1 432 89 0 111 chr2 50067436 50067526 -203189057 - MADE1 DNA Mariner 0 80 1 232 250 59 29 chr2 50067974 50068042 -203188541 + L1P LINE L1 3610 3679 -2467 231 192 27 27 chr2 50068085 50068158 -203188425 + (CA)n Simple_repeat Simple_repeat 1 73 0 453 217 36 24 chr2 50068181 50068347 -203188236 + (CA)n Simple_repeat Simple_repeat 1 168 0 2268 114 10 0 chr2 50068407 50068714 -203187869 + AluSx SINE Alu 1 310 -2 286 280 40 8 chr2 50068773 50068898 -203187685 + L1ME LINE L1 3827 3955 -2191 542 284 26 31 chr2 50068902 50069096 -203187487 - MIR SINE MIR 0 262 70 298 301 80 64 chr2 50069147 50069587 -203186996 + L1ME LINE L1 3964 4396 -1750 1872 151 0 0 chr2 50069587 50069859 -203186724 + AluSx SINE Alu 1 272 -40 298 301 80 64 chr2 50069859 50069874 -203186709 + L1ME LINE L1 4396 4409 -1737 219 36 0 0 chr2 50069874 50069902 -203186681 + (CA)n Simple_repeat Simple_repeat 2 29 0 298 301 80 64 chr2 50069902 50070519 -203186064 + L1ME LINE L1 4409 5054 -1092 1302 152 15 0 chr2 50070617 50070814 -203185769 + AluSg/x SINE Alu 85 284 -28 344 296 59 41 chr2 50070841 50071010 -203185573 + L1ME LINE L1 5187 5358 -788 496 266 119 18 chr2 50071084 50071302 -203185281 + L1ME LINE L1 5382 5621 -500 1747 210 62 10 chr2 50071367 50071767 -203184816 + MLT1C LTR MaLR 34 454 -13 2638 117 20 3 chr2 50071797 50072155 -203184428 - THE1B LTR MaLR 0 364 1 283 294 68 7 chr2 50072155 50072301 -203184282 + L1ME LINE L1 5634 5788 -333 2736 145 53 23 chr2 50072302 50072806 -203183777 + MLT2A1 LTR ERVL 1 515 0 1686 188 3 10 chr2 50073137 50073435 -203183148 - AluJo SINE Alu -16 296 1 1526 206 143 14 chr2 50073490 50073839 -203182744 - MSTD LTR MaLR -2 394 1 1078 159 66 44 chr2 50074210 50074436 -203182147 + AluJo SINE Alu 82 312 0 219 231 0 0 chr2 50075221 50075261 -203181322 + polypurine Low_complexity Low_complexity 1 40 0 402 85 0 0 chr2 50075273 50075332 -203181251 + (CA)n Simple_repeat Simple_repeat 2 60 0 398 333 14 23 chr2 50076267 50076444 -203180139 + MIR SINE MIR 32 213 -49 1459 153 99 0 chr2 50077164 50077458 -203179125 + MER33 DNA MER1_type 2 324 0 2811 245 30 45 chr2 50080228 50081072 -203175511 + L1MCc LINE L1 648 1478 -4945 1051 193 0 0 chr2 50081079 50081271 -203175312 + AluJb SINE Alu 118 309 -3 631 277 170 34 chr2 50081317 50081959 -203174624 + L1MCc LINE L1 1605 2524 -4598 201 280 10 30 chr2 50082258 50082358 -203174225 + (CATATA)n Simple_repeat Simple_repeat 4 101 0 3031 77 15 0 chr2 50082380 50082771 -203173812 - L1PA13 LINE L1 -1 6162 5766 402 148 23 57 chr2 50082775 50082863 -203173720 - L1PA11 LINE L1 0 6174 6090 245 303 34 34 chr2 50082900 50082989 -203173594 - L2 LINE L2 -40 3232 3144 235 278 111 43 chr2 50083260 50083422 -203173161 - L2 LINE L2 -744 2570 2398 317 186 49 88 chr2 50083425 50083527 -203173056 + HAL1 LINE L1 100 197 -2310 405 304 62 78 chr2 50083652 50083889 -203172694 + HAL1 LINE L1 576 806 -1701 2044 112 3 50 chr2 50083889 50084192 -203172391 - AluSc SINE Alu -20 289 1 405 304 62 78 chr2 50084192 50084326 -203172257 + HAL1 LINE L1 806 941 -1566 3145 239 133 96 chr2 50084405 50084585 -203171998 + L1ME3A LINE L1 22 194 -6346 214 25 25 50 chr2 50084585 50084625 -203171958 + (TTTTG)n Simple_repeat Simple_repeat 1 39 0 3145 239 133 96 chr2 50084625 50086105 -203170478 + L1ME3A LINE L1 194 1783 -4757 1629 165 15 18 chr2 50086105 50086377 -203170206 + AluJo SINE Alu 12 282 -30 3145 239 133 96 chr2 50086377 50086895 -203169688 + L1ME3A LINE L1 1783 2281 -4259 1461 243 101 13 chr2 50086895 50087517 -203169066 + L1ME3A LINE L1 3303 3979 -2561 * 1736 174 108 26 chr2 50087499 50087889 -203168694 + L1MD1 LINE L1 5814 6235 -7 1558 274 40 52 chr2 50087936 50088474 -203168109 + L1ME3A LINE L1 4780 5306 -1234 2661 98 23 0 chr2 50088474 50088821 -203167762 - THE1A LTR MaLR 0 355 1 1558 274 40 52 chr2 50088821 50089172 -203167411 + L1ME3A LINE L1 5306 5659 -881 2347 91 3 0 chr2 50089172 50089468 -203167115 + AluSg SINE Alu 1 297 -13 1940 242 59 92 chr2 50089488 50090357 -203166226 + L1ME3A LINE L1 5722 6561 -3 1504 232 100 30 chr2 50091054 50091545 -203165038 + L1ME3A LINE L1 6039 6563 -1 324 362 26 13 chr2 50091624 50091776 -203164807 - MIR SINE MIR -86 176 23 342 0 0 0 chr2 50092271 50092309 -203164274 + (TG)n Simple_repeat Simple_repeat 2 39 0 230 257 110 28 chr2 50092848 50092957 -203163626 - MIR SINE MIR -58 150 33 515 237 133 58 chr2 50093321 50093494 -203163089 - MER5A DNA MER1_type 0 189 4 298 0 23 23 chr2 50093914 50093957 -203162626 + (TTTTC)n Simple_repeat Simple_repeat 3 45 0 2461 90 7 0 chr2 50093960 50094270 -203162313 - AluSx SINE Alu 0 312 1 566 269 62 6 chr2 50094359 50094519 -203162064 - MIR SINE MIR -13 249 81 927 223 62 43 chr2 50094595 50094851 -203161732 - MIR SINE MIR -1 261 1 429 252 98 14 chr2 50095452 50095595 -203160988 + MIR SINE MIR 58 212 -50 225 0 0 0 chr2 50095748 50095773 -203160810 + (T)n Simple_repeat Simple_repeat 1 25 0 233 369 23 8 chr2 50096648 50096778 -203159805 + MIR SINE MIR 116 247 -15 2232 89 10 3 chr2 50098187 50098490 -203158093 + AluSx SINE Alu 1 305 -7 2259 82 20 0 chr2 50098492 50098785 -203157798 + AluSg SINE Alu 3 301 -9 454 301 34 20 chr2 50098817 50098963 -203157620 - MIR SINE MIR -84 178 31 295 310 23 0 chr2 50099121 50099208 -203157375 - L2 LINE L2 -1 3312 3224 661 207 213 16 chr2 50099247 50099735 -203156848 + LTR50 LTR ERVL 1 684 -111 513 245 28 63 chr2 50099744 50099887 -203156696 + MER63 DNA MER1_type 2 765 -71 349 205 12 24 chr2 50099928 50100011 -203156572 + LTR33A LTR ERVL 440 521 -2 302 220 110 11 chr2 50101540 50101631 -203154952 - L1MC4 LINE L1 -1339 6703 6604 279 302 177 13 chr2 50102480 50102640 -203153943 - MIR3 SINE MIR -62 146 3 370 196 148 34 chr2 50103069 50103222 -203153361 - MER34 LTR ERV1 -5 537 368 27 0 0 0 chr2 50103760 50103787 -203152796 + AT_rich Low_complexity Low_complexity 1 27 0 2122 130 0 7 chr2 50103796 50104096 -203152487 + AluJo SINE Alu 1 298 -14 686 181 6 113 chr2 50104223 50104348 -203152235 + MER5A DNA MER1_type 16 118 -71 1611 145 6 83 chr2 50104348 50104672 -203151911 - AluJb SINE Alu -11 301 3 686 181 6 113 chr2 50104672 50104723 -203151860 + MER5A DNA MER1_type 118 173 -16 651 281 23 0 chr2 50104725 50104896 -203151687 + MER5B DNA MER1_type 4 178 0 3941 80 35 0 chr2 50104947 50105482 -203151101 + MER41A LTR ERV1 1 554 0 202 298 18 0 chr2 50105995 50106052 -203150531 + L2 LINE L2 3256 3313 0 289 313 84 35 chr2 50106059 50106252 -203150331 - L2 LINE L2 -262 3010 2793 2418 103 3 0 chr2 50106283 50106594 -203149989 - AluSx SINE Alu 0 312 1 823 271 76 15 chr2 50106622 50106951 -203149632 + MLT1I LTR MaLR 59 407 -2 219 36 0 0 chr2 50107507 50107535 -203149048 + (TTCA)n Simple_repeat Simple_repeat 4 31 0 3720 143 13 11 chr2 50107766 50108396 -203148187 + L1MB2 LINE L1 5532 6162 -9 2041 169 3 6 chr2 50108637 50108997 -203147586 + MLT1A1 LTR MaLR 1 359 -6 2029 159 3 0 chr2 50109083 50109385 -203147198 + AluJb SINE Alu 1 303 -9 1982 139 53 12 chr2 50109570 50109893 -203146690 - MER1B DNA MER1_type -1 336 1 2422 77 10 7 chr2 50109903 50110202 -203146381 - AluSc SINE Alu -9 300 1 265 330 0 9 chr2 50110494 50110606 -203145977 - MARNA DNA Mariner -155 431 321 691 289 80 39 chr2 50110617 50111191 -203145392 + MLT2F LTR ERVL 12 650 -13 1018 65 0 8 chr2 50111200 50111324 -203145259 + AluSq SINE Alu 74 196 -117 1276 67 0 0 chr2 50111326 50111476 -203145107 + AluSq SINE Alu 149 298 -15 352 270 99 13 chr2 50111477 50111629 -203144954 - MARNA DNA Mariner -276 310 146 2130 126 0 0 chr2 50111699 50112020 -203144563 - AluSq SINE Alu 0 321 1 1612 168 32 3 chr2 50112234 50112519 -203144064 - AluJo SINE Alu -19 293 1 603 292 188 7 chr2 50112795 50113083 -203143500 - L2 LINE L2 0 3272 2933 598 311 149 43 chr2 50113136 50113966 -203142617 - L2 LINE L2 -458 2856 1939 418 362 0 0 chr2 50114288 50114426 -203142157 + GA-rich Low_complexity Low_complexity 1 138 0 2132 135 0 0 chr2 50114666 50114963 -203141620 - AluSx SINE Alu -12 300 4 267 324 81 0 chr2 50114963 50115111 -203141472 - L2 LINE L2 -1423 1891 1732 184 288 164 14 chr2 50115204 50115277 -203141306 + MER5A DNA MER1_type 43 126 -63 632 231 113 5 chr2 50115279 50115482 -203141101 - MER45C DNA AcHobo -11 942 718 1503 234 84 29 chr2 50115490 50116017 -203140566 + L1ME3 LINE L1 5385 5990 -172 1760 186 10 13 chr2 50116017 50116324 -203140259 + AluJb SINE Alu 1 306 -6 1503 234 84 29 chr2 50116324 50116507 -203140076 + L1ME3 LINE L1 5990 6162 0 282 29 0 0 chr2 50118447 50118482 -203138101 + (CA)n Simple_repeat Simple_repeat 1 35 0 2413 84 0 10 chr2 50118532 50118843 -203137740 + AluSg SINE Alu 1 308 -2 2114 129 13 7 chr2 50118850 50119159 -203137424 + AluJb SINE Alu 1 311 -1 619 265 92 54 chr2 50119302 50119849 -203136734 + L1ME4a LINE L1 5306 5885 -236 2178 125 3 3 chr2 50119849 50120160 -203136423 + AluSx SINE Alu 1 311 -1 619 265 92 54 chr2 50120160 50120249 -203136334 + L1ME4a LINE L1 5885 5969 -152 654 300 40 22 chr2 50121125 50121348 -203135235 + MIR SINE MIR 8 234 -28 1430 249 169 31 chr2 50121387 50122316 -203134267 + HAL1 LINE L1 1424 2480 -27 28 0 0 0 chr2 50122562 50122590 -203133993 + AT_rich Low_complexity Low_complexity 1 28 0 601 299 76 53 chr2 50122699 50123359 -203133224 + L1M4 LINE L1 3750 4424 -1722 279 205 115 0 chr2 50123397 50123475 -203133108 + L1MC4 LINE L1 7930 8016 -26 226 292 90 21 chr2 50123600 50123744 -203132839 + HAL1 LINE L1 1208 1361 -1146 4698 102 50 101 chr2 50123744 50124702 -203131881 + L1M1 LINE L1 1492 2400 -5165 347 67 0 0 chr2 50124709 50124754 -203131829 - MLT1A1 LTR MaLR -222 143 99 21 36 0 0 chr2 50125902 50125930 -203130653 + AT_rich Low_complexity Low_complexity 1 28 0 8839 189 21 13 chr2 50125930 50126289 -203130294 - L1PB1 LINE L1 -3 6864 6509 276 30 0 0 chr2 50126289 50126322 -203130261 + (TA)n Simple_repeat Simple_repeat 1 33 0 8839 189 21 13 chr2 50126322 50128878 -203127705 - L1PB1 LINE L1 -358 6509 3971 7930 105 41 50 chr2 50128885 50129268 -203127315 - L1PB1 LINE L1 -4334 2529 2144 2030 148 3 0 chr2 50129268 50129558 -203127025 + AluSx SINE Alu 1 291 -21 7930 105 41 50 chr2 50129558 50129587 -203126996 - L1PB1 LINE L1 -4719 2144 2116 2249 109 3 0 chr2 50129587 50129889 -203126694 + AluSq SINE Alu 11 313 0 7930 105 41 50 chr2 50129889 50130925 -203125658 - L1PB1 LINE L1 -4747 2116 1094 259 321 18 12 chr2 50130988 50131156 -203125427 + L1M4 LINE L1 2860 3028 -3118 877 270 73 31 chr2 50131733 50132088 -203124495 - MLT1E LTR MaLR -168 425 56 1004 215 119 91 chr2 50132091 50132405 -203124178 - L1MCc LINE L1 -5999 424 95 1883 149 0 19 chr2 50132405 50132713 -203123870 - AluJo SINE Alu -4 308 7 1004 215 119 91 chr2 50132713 50132793 -203123790 - L1MCc LINE L1 -6328 95 19 * 1225 294 63 30 chr2 50132785 50133016 -203123567 + L1M4 LINE L1 2897 3119 -3027 2018 130 0 40 chr2 50133016 50133338 -203123245 + AluSx SINE Alu 1 309 -3 1225 294 63 30 chr2 50133338 50133963 -203122620 + L1M4 LINE L1 3119 3781 -2365 748 206 4 40 chr2 50134507 50134735 -203121848 + L1M4 LINE L1 3773 3992 -2154 580 223 80 42 chr2 50134748 50135043 -203121540 - MLT1F LTR MaLR -11 531 282 912 280 81 31 chr2 50135043 50135634 -203120949 - MLT1G LTR MaLR 0 590 1 657 305 53 12 chr2 50135635 50135973 -203120610 + L1M4 LINE L1 3995 4346 -1800 25 0 0 0 chr2 50136306 50136331 -203120252 + AT_rich Low_complexity Low_complexity 1 25 0 943 244 142 4 chr2 50136338 50136788 -203119795 + L1M4 LINE L1 4356 4867 -1279 352 331 35 7 chr2 50136978 50137120 -203119463 + MLT1I LTR MaLR 137 282 -127 238 256 15 95 chr2 50137120 50137257 -203119326 + MLT1I LTR MaLR 258 383 -26 676 300 86 41 chr2 50137499 50138058 -203118525 - L1MEd LINE L1 -4585 1725 1193 1553 179 47 75 chr2 50138058 50138408 -203118175 - MLT2D LTR ERVL 0 414 77 2460 88 0 0 chr2 50138408 50138714 -203117869 + AluY SINE Alu 1 306 -5 1553 179 47 75 chr2 50138714 50138787 -203117796 - MLT2D LTR ERVL -337 77 3 676 300 86 41 chr2 50138787 50139031 -203117552 - L1MEd LINE L1 -5117 1193 961 2473 73 3 0 chr2 50139031 50139333 -203117250 - AluSx SINE Alu -9 303 1 676 300 86 41 chr2 50139333 50139714 -203116869 - L1MEd LINE L1 -5349 961 447 185 329 73 29 chr2 50140859 50140996 -203115587 + MIR SINE MIR 47 189 -73 14764 181 28 54 chr2 50140996 50147197 -203109386 + L1MA4 LINE L1 3 5997 -1005 1693 189 0 7 chr2 50147197 50147483 -203109100 + AluJo SINE Alu 5 288 -24 14764 181 28 54 chr2 50147483 50148464 -203108119 + L1MA4 LINE L1 5997 7002 0 291 54 0 0 chr2 50149928 50149965 -203106618 + (TG)n Simple_repeat Simple_repeat 2 38 0 859 251 133 40 chr2 50150487 50150834 -203105749 - MLT1I LTR MaLR -30 379 1 4902 162 66 31 chr2 50150938 50151841 -203104742 + MER45B DNA AcHobo 2 945 -636 2160 121 3 7 chr2 50151841 50152146 -203104437 - AluSx SINE Alu -8 304 1 4902 162 66 31 chr2 50152146 50152246 -203104337 + MER45B DNA AcHobo 945 1040 0 195 206 0 0 chr2 50152305 50152339 -203104244 - MIR3 SINE MIR -24 184 151 253 194 81 0 chr2 50152725 50152787 -203103796 + MIR SINE MIR 129 195 -67 8411 57 21 1 chr2 50152793 50153843 -203102740 - MER11C LTR ERVK 0 1071 1 592 126 2 6 chr2 50153987 50154081 -203102502 - L1MB2 LINE L1 -2 6169 6091 3239 126 9 38 chr2 50154081 50154441 -203102142 + MER34B LTR ERV1 4 346 -219 1913 152 3 7 chr2 50154441 50154762 -203101821 + AluSx SINE Alu 1 320 0 3239 126 9 38 chr2 50154762 50154957 -203101626 + MER34B LTR ERV1 346 545 -20 1820 139 14 3 chr2 50154968 50155255 -203101328 - L1MB2 LINE L1 -93 6078 5789 1576 213 34 50 chr2 50155444 50155824 -203100759 + MLT1A2 LTR MaLR 1 374 0 21 0 0 0 chr2 50155845 50155866 -203100717 + AT_rich Low_complexity Low_complexity 1 21 0 2137 107 13 3 chr2 50155923 50156221 -203100362 - AluSq SINE Alu -12 301 1 465 268 43 29 chr2 50156285 50156423 -203100160 + MIR SINE MIR 4 143 -119 201 340 0 0 chr2 50156411 50156461 -203100122 + L2 LINE L2 3253 3302 -11 * 2282 112 0 0 chr2 50156617 50156922 -203099661 - AluSg SINE Alu -5 305 1 515 189 94 8 chr2 50157687 50157814 -203098769 + L1MC/D LINE L1 5400 5537 -2271 2206 119 0 3 chr2 50157837 50158140 -203098443 + AluSq SINE Alu 3 304 -9 240 231 77 13 chr2 50158145 50158223 -203098360 + L1MC/D LINE L1 5648 5730 -2078 212 200 17 0 chr2 50158419 50158479 -203098104 + (TATATG)n Simple_repeat Simple_repeat 2 62 0 3957 138 9 38 chr2 50158993 50159604 -203096979 + L1MB3 LINE L1 5540 6132 -51 1980 156 3 3 chr2 50159604 50159911 -203096672 + AluJo SINE Alu 1 307 -5 3957 138 9 38 chr2 50159911 50159959 -203096624 + L1MB3 LINE L1 6132 6180 -3 486 299 62 45 chr2 50159988 50160232 -203096351 + MIR SINE MIR 3 250 -12 204 40 0 0 chr2 50160243 50160268 -203096315 + (GGGA)n Simple_repeat Simple_repeat 4 28 0 261 83 0 0 chr2 50160472 50160508 -203096075 + (GGA)n Simple_repeat Simple_repeat 2 37 0 331 293 135 34 chr2 50160948 50161156 -203095427 + HAL1 LINE L1 704 932 -1575 221 107 18 54 chr2 50161160 50161216 -203095367 + (CAAAAA)n Simple_repeat Simple_repeat 2 55 0 680 247 63 40 chr2 50161223 50161411 -203095172 + MLT1G LTR MaLR 10 202 -388 1398 124 66 9 chr2 50161411 50161637 -203094946 - MSTB1 LTR MaLR 0 432 194 931 130 65 13 chr2 50161639 50161793 -203094790 - FRAM SINE Alu -17 159 1 1145 149 43 0 chr2 50161793 50161981 -203094602 - MSTB1 LTR MaLR -236 196 1 7096 211 51 48 chr2 50161981 50162962 -203093621 - MSTB1-int LTR MaLR 0 1651 675 615 206 0 64 chr2 50162962 50163103 -203093480 + FLAM_C SINE Alu 2 133 0 7096 211 51 48 chr2 50163103 50163400 -203093183 - MSTB1-int LTR MaLR -976 675 380 2482 67 13 0 chr2 50163400 50163698 -203092885 + AluSp SINE Alu 1 302 -11 7096 211 51 48 chr2 50163698 50164059 -203092524 - MSTB1-int LTR MaLR -1271 380 6 2220 165 75 8 chr2 50164063 50164463 -203092120 - MSTB1 LTR MaLR -3 429 3 1236 239 152 3 chr2 50164464 50164581 -203092002 + MLT1G LTR MaLR 197 295 -295 1968 177 30 19 chr2 50164581 50164942 -203091641 - MLT1A1 LTR MaLR 0 365 1 1236 239 152 3 chr2 50164942 50165167 -203091416 + MLT1G LTR MaLR 295 590 0 1169 256 155 62 chr2 50165171 50165731 -203090852 + HAL1 LINE L1 978 1484 -1023 2066 138 3 0 chr2 50165731 50166021 -203090562 + AluSq SINE Alu 1 291 -22 2175 122 6 6 chr2 50166030 50166341 -203090242 + AluSx SINE Alu 1 311 -1 1169 256 155 62 chr2 50166341 50166613 -203089970 + HAL1 LINE L1 1491 1899 -608 1523 210 45 21 chr2 50166613 50166694 -203089889 + MER58B DNA MER1_type 1 79 -2341 1850 119 88 0 chr2 50166694 50166979 -203089604 - AluJb SINE Alu -2 310 1 1523 210 45 21 chr2 50166979 50167230 -203089353 + MER58B DNA MER1_type 79 341 0 200 160 20 20 chr2 50167578 50167628 -203088955 + A-rich Low_complexity Low_complexity 3 52 0 932 281 152 36 chr2 50167953 50168059 -203088524 + L2 LINE L2 2421 2513 -800 2031 146 0 0 chr2 50168059 50168353 -203088230 - AluSx SINE Alu -18 294 1 2154 148 0 0 chr2 50168353 50168658 -203087925 - AluSx SINE Alu -7 305 1 932 281 152 36 chr2 50168658 50169329 -203087254 + L2 LINE L2 2512 3300 -13 207 0 0 0 chr2 50169331 50169354 -203087229 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 319 247 53 89 chr2 50169358 50169548 -203087035 + HAL1b LINE L1 733 915 -433 1538 183 4 15 chr2 50170214 50170488 -203086095 + AluJo SINE Alu 7 277 -35 30 27 0 0 chr2 50170503 50170540 -203086043 + AT_rich Low_complexity Low_complexity 1 37 0 1935 85 23 16 chr2 50171493 50171751 -203084832 + AluSq SINE Alu 1 260 -53 183 42 0 0 chr2 50171771 50171795 -203084788 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1608 299 76 9 chr2 50171892 50172471 -203084112 - Tigger8 DNA MER2_type -47 619 2 3211 162 55 51 chr2 50172598 50173270 -203083313 + LTR8A LTR ERV1 34 708 -19 248 200 0 0 chr2 50173336 50173381 -203083202 + L2 LINE L2 3258 3302 -11 2421 121 113 3 chr2 50173463 50173904 -203082679 + MER4E LTR ERV1 126 779 0 866 227 57 30 chr2 50175354 50175521 -203081062 + L1MC4 LINE L1 7687 7865 -177 2681 178 61 115 chr2 50175521 50176289 -203080294 - LTR8A LTR ERV1 0 727 1 866 227 57 30 chr2 50176289 50176385 -203080198 + L1MC4 LINE L1 7865 7957 -85 2309 112 7 0 chr2 50176867 50177172 -203079411 + AluSx SINE Alu 1 307 -5 201 74 0 0 chr2 50177172 50177199 -203079384 + (GA)n Simple_repeat Simple_repeat 1 27 0 352 321 118 37 chr2 50177349 50177729 -203078854 + MLT1J LTR MaLR 99 509 -2 475 181 53 105 chr2 50177731 50177848 -203078735 + MER112 DNA MER1_type 67 189 -71 1895 173 0 0 chr2 50177848 50178143 -203078440 + AluSx SINE Alu 1 295 -17 475 181 53 105 chr2 50178143 50178155 -203078428 + MER112 DNA MER1_type 189 200 -60 2278 95 0 0 chr2 50178155 50178469 -203078114 - AluSx SINE Alu 0 314 1 475 181 53 105 chr2 50178469 50178508 -203078075 + MER112 DNA MER1_type 200 228 -32 247 320 0 0 chr2 50178520 50178598 -203077985 - MER116 DNA Mariner -2 78 1 1284 201 112 24 chr2 50179168 50179506 -203077077 + L1ME2 LINE L1 5795 6162 -2 22 35 0 0 chr2 50179729 50179758 -203076825 + AT_rich Low_complexity Low_complexity 1 29 0 1097 253 148 27 chr2 50179870 50180316 -203076267 - L2 LINE L2 -8 3305 2806 220 214 0 0 chr2 50180381 50180423 -203076160 + (TG)n Simple_repeat Simple_repeat 1 42 0 312 338 176 7 chr2 50180454 50180913 -203075670 + L2 LINE L2 2310 2846 -468 1127 246 185 24 chr2 50182901 50183356 -203073227 - MER115 DNA AcHobo -8 685 157 981 234 21 0 chr2 50183356 50183548 -203073035 + MER58A DNA MER1_type 1 196 -28 458 242 0 88 chr2 50183543 50183725 -203072858 - MER115 DNA AcHobo -527 166 1 * 2187 131 0 0 chr2 50183965 50184263 -203072320 + AluSx SINE Alu 1 298 -14 213 311 108 0 chr2 50184872 50184946 -203071637 + L2 LINE L2 3186 3267 -5 2313 115 3 0 chr2 50185466 50185770 -203070813 + AluSx SINE Alu 1 305 -7 24 67 0 0 chr2 50185809 50185854 -203070729 + AT_rich Low_complexity Low_complexity 1 45 0 538 301 13 13 chr2 50186263 50186419 -203070164 + MER5B DNA MER1_type 11 166 -12 1940 156 0 3 chr2 50187277 50187580 -203069003 - AluJo SINE Alu 0 302 1 289 280 4 30 chr2 50187735 50187824 -203068759 + MER5B DNA MER1_type 11 107 -82 819 190 128 69 chr2 50188074 50188453 -203068130 - LTR48 LTR ERV1 0 787 227 1063 171 21 67 chr2 50188584 50188666 -203067917 + MER96B DNA MER1_type? 190 274 -143 1951 140 10 29 chr2 50188666 50188974 -203067609 + AluJo SINE Alu 1 302 -10 1063 171 21 67 chr2 50188974 50189130 -203067453 + MER96B DNA MER1_type? 274 417 0 216 250 39 0 chr2 50189389 50189441 -203067142 - MIR SINE MIR -117 91 38 21 0 0 0 chr2 50189582 50189603 -203066980 + AT_rich Low_complexity Low_complexity 1 21 0 1559 168 11 32 chr2 50189652 50189932 -203066651 + AluJo SINE Alu 9 282 -30 488 129 0 0 chr2 50189932 50190002 -203066581 - AluJ/FRAM SINE Alu -14 298 229 203 186 0 23 chr2 50191978 50192021 -203064562 + A-rich Low_complexity Low_complexity 3 44 0 1919 186 70 32 chr2 50192144 50192586 -203063997 - LTR2B LTR ERV1 0 490 32 198 0 0 0 chr2 50193794 50193816 -203062767 + (T)n Simple_repeat Simple_repeat 1 22 0 264 59 0 0 chr2 50194059 50194093 -203062490 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 2017 135 0 0 chr2 50194127 50194416 -203062167 - AluSx SINE Alu -23 289 1 198 0 0 0 chr2 50195124 50195146 -203061437 + (T)n Simple_repeat Simple_repeat 1 22 0 291 54 0 0 chr2 50195388 50195425 -203061158 + (GAAAA)n Simple_repeat Simple_repeat 2 38 0 2250 100 0 0 chr2 50195456 50195745 -203060838 - AluSx SINE Alu -23 289 1 184 293 0 0 chr2 50196073 50196114 -203060469 + MIR SINE MIR 20 60 -202 335 247 0 12 chr2 50196116 50196197 -203060386 - MER116 DNA Mariner 0 80 1 239 274 73 40 chr2 50196669 50196793 -203059790 - MER69A DNA AcHobo -29 148 21 446 348 19 13 chr2 50196871 50197029 -203059554 - L2 LINE L2 -556 2758 2600 273 26 0 0 chr2 50197199 50197238 -203059345 - AluSx SINE Alu 0 299 261 1823 101 0 0 chr2 50197238 50197466 -203059117 - AluSx SINE Alu -84 228 1 239 344 125 16 chr2 50197939 50198067 -203058516 + L2 LINE L2 3122 3263 -9 2132 229 55 12 chr2 50198784 50199274 -203057309 - LTR40a LTR ERVL -2 517 7 547 265 85 0 chr2 50200245 50200434 -203056149 + MIR SINE MIR 56 260 -2 202 234 0 0 chr2 50200445 50200492 -203056091 + (TAAA)n Simple_repeat Simple_repeat 4 50 0 441 229 0 0 chr2 50200671 50200754 -203055829 + Tigger5 DNA MER2_type 2239 2321 -2 342 197 16 0 chr2 50200755 50200816 -203055767 - Tigger5 DNA MER2_type -2247 76 15 29 0 0 0 chr2 50201123 50201152 -203055431 + AT_rich Low_complexity Low_complexity 1 29 0 5579 78 7 14 chr2 50201655 50202351 -203054232 - LTR8 LTR ERV1 0 691 1 2069 210 61 7 chr2 50202661 50203104 -203053479 + MLT1C LTR MaLR 1 467 0 298 299 0 11 chr2 50203137 50203224 -203053359 + L2 LINE L2 3228 3313 0 209 286 0 0 chr2 50203821 50203870 -203052713 + MER5A DNA MER1_type 1 49 -140 516 277 81 70 chr2 50203873 50203896 -203052687 + L1MC4a LINE L1 4747 4768 -1378 2178 103 27 0 chr2 50203896 50204197 -203052386 + AluY SINE Alu 3 311 0 516 277 81 70 chr2 50204197 50204715 -203051868 + L1MC4a LINE L1 4768 5294 -852 1013 123 0 182 chr2 50204742 50204978 -203051605 + 7SK RNA RNA 1 193 0 2156 94 35 0 chr2 50204997 50205284 -203051299 + AluSq SINE Alu 1 297 -16 2022 248 47 32 chr2 50205291 50205908 -203050675 + L1MC4a LINE L1 5314 5939 -1869 2116 114 3 16 chr2 50208286 50208594 -203047989 + AluSx SINE Alu 1 304 -8 1126 182 0 6 chr2 50208646 50208822 -203047761 + FAM SINE Alu 1 175 0 200 273 232 0 chr2 50208850 50208949 -203047634 + L2 LINE L2 2736 2857 -457 1735 179 3 0 chr2 50209376 50209661 -203046922 + AluJb SINE Alu 1 286 -26 21 0 0 0 chr2 50209661 50209682 -203046901 + AT_rich Low_complexity Low_complexity 1 21 0 293 246 208 23 chr2 50210299 50210429 -203046154 + MIR SINE MIR 109 262 0 2186 94 28 0 chr2 50210483 50210769 -203045814 + AluSc SINE Alu 1 294 -15 495 225 9 0 chr2 50211194 50211305 -203045278 + MIR3 SINE MIR 85 196 -12 566 261 88 85 chr2 50211638 50211759 -203044824 + L1ME3A LINE L1 5610 5729 -441 2002 147 7 0 chr2 50211759 50212059 -203044524 + AluSx SINE Alu 1 302 -10 566 261 88 85 chr2 50212059 50212278 -203044305 + L1ME3A LINE L1 5729 5951 -219 630 299 130 14 chr2 50212920 50213204 -203043379 + MLT1J LTR MaLR 137 453 -58 349 36 18 18 chr2 50213285 50213341 -203043242 + (TA)n Simple_repeat Simple_repeat 2 57 0 324 264 68 20 chr2 50213372 50213520 -203043063 + HAL1b LINE L1 606 760 -588 235 290 0 0 chr2 50213555 50213617 -203042966 + HAL1b LINE L1 851 912 -436 460 194 46 106 chr2 50213657 50213894 -203042689 + HAL1b LINE L1 985 1207 -141 256 266 207 41 chr2 50214326 50214455 -203042128 - MIR SINE MIR -62 146 22 253 175 0 0 chr2 50214550 50214590 -203041993 - L3b LINE CR1 -8 1575 1536 269 298 12 12 chr2 50215335 50215419 -203041164 + MIR SINE MIR 60 143 -119 1906 152 7 7 chr2 50215544 50215841 -203040742 - AluJb SINE Alu -15 297 1 330 235 76 45 chr2 50215935 50216067 -203040516 - MLT1J LTR MaLR -15 496 361 1683 184 3 26 chr2 50216171 50216476 -203040107 - AluJo SINE Alu -14 298 1 1870 159 75 31 chr2 50216564 50216923 -203039660 + THE1C LTR MaLR 1 375 0 244 279 105 12 chr2 50216923 50217009 -203039574 - MLT1L LTR MaLR -521 94 1 1013 137 0 7 chr2 50217555 50217701 -203038882 + AluJb SINE Alu 1 145 -167 1644 168 0 48 chr2 50217715 50218030 -203038553 + AluJo SINE Alu 11 310 -2 281 311 19 19 chr2 50218278 50218384 -203038199 + MER5A DNA MER1_type 82 187 -2 1713 159 0 63 chr2 50218464 50218599 -203037984 + AluJb SINE Alu 1 143 -169 2383 74 40 0 chr2 50218599 50218898 -203037685 + AluY SINE Alu 1 311 0 1713 159 0 63 chr2 50218898 50219077 -203037506 + AluJb SINE Alu 143 295 -17 1832 162 3 3 chr2 50219087 50219398 -203037185 + AluSx SINE Alu 1 311 0 1404 235 149 31 chr2 50219508 50219959 -203036624 + MLT1E LTR MaLR 90 593 0 1036 178 16 31 chr2 50220251 50220442 -203036141 - MER5A DNA MER1_type 0 189 2 1925 158 0 3 chr2 50220684 50220975 -203035608 + AluJb SINE Alu 1 290 -22 5294 25 0 0 chr2 50220984 50221555 -203035028 + L1PA5 LINE L1 5584 6154 0 2043 94 0 123 chr2 50223020 50223360 -203033223 - AluSx SINE Alu -3 299 2 2256 113 0 0 chr2 50224213 50224504 -203032079 + AluSq SINE Alu 1 291 -22 825 214 25 6 chr2 50224569 50224728 -203031855 + Tigger3(Golem) DNA MER2_type 1 162 -2867 * 4174 119 76 47 chr2 50224725 50225042 -203031541 + Tigger3(Golem) DNA MER2_type 2231 2537 -491 1385 148 201 8 chr2 50225042 50225286 -203031297 - AluJb SINE Alu -11 291 1 4174 119 76 47 chr2 50225286 50225305 -203031278 + Tigger3(Golem) DNA MER2_type 2537 2554 -474 216 0 0 0 chr2 50225305 50225329 -203031254 + (TA)n Simple_repeat Simple_repeat 2 25 0 1547 153 130 0 chr2 50225329 50225590 -203030993 - AluJb SINE Alu -16 296 2 4174 119 76 47 chr2 50225590 50226026 -203030557 + Tigger3(Golem) DNA MER2_type 2553 3028 0 21 57 0 0 chr2 50226403 50226438 -203030145 + AT_rich Low_complexity Low_complexity 1 35 0 5674 88 40 29 chr2 50226485 50227291 -203029292 + L1MA2 LINE L1 5490 6304 0 2489 101 27 27 chr2 50228012 50228387 -203028196 - THE1C LTR MaLR 0 375 1 504 282 13 26 chr2 50229121 50229277 -203027306 + HAL1 LINE L1 13 166 -2341 3342 249 113 60 chr2 50229279 50230684 -203025899 + HAL1 LINE L1 223 1719 -788 1542 197 3 7 chr2 50230684 50230968 -203025615 + AluJo SINE Alu 13 295 -17 3342 249 113 60 chr2 50230968 50231114 -203025469 + HAL1 LINE L1 1719 1856 -651 231 238 38 12 chr2 50231378 50231458 -203025125 + (TATATG)n Simple_repeat Simple_repeat 2 83 0 390 277 14 21 chr2 50231870 50232011 -203024572 + L1MC4a LINE L1 5762 5901 -1907 2116 148 83 3 chr2 50232541 50232878 -203023705 + MLT1A1 LTR MaLR 1 364 -1 7538 199 86 32 chr2 50232880 50233395 -203023188 + MLT1A1-int LTR MaLR 2 488 -1247 1498 72 0 0 chr2 50233395 50233575 -203023008 + L1PA8 LINE L1 5991 6170 -2 7538 199 86 32 chr2 50233575 50234700 -203021883 + MLT1A1-int LTR MaLR 488 1730 -5 1868 146 94 6 chr2 50234719 50235048 -203021535 + MLT1A1 LTR MaLR 1 358 -7 2003 138 3 3 chr2 50235352 50235682 -203020901 + AluSx SINE Alu 3 332 0 330 228 112 0 chr2 50236691 50236806 -203019777 - MIR3 SINE MIR 0 208 79 3487 156 57 42 chr2 50237525 50237764 -203018819 + L1MB3 LINE L1 5443 5677 -506 1591 141 0 0 chr2 50237764 50237991 -203018592 + AluJb SINE Alu 86 312 0 3487 156 57 42 chr2 50237991 50238435 -203018148 + L1MB3 LINE L1 5677 6136 -47 1141 59 0 0 chr2 50238434 50238610 -203017973 + L1PA3 LINE L1 5997 6172 0 * 211 122 41 0 chr2 50238764 50238813 -203017770 + CT-rich Low_complexity Low_complexity 2 52 0 1771 142 9 69 chr2 50238870 50239188 -203017395 + AluJo SINE Alu 1 299 -13 217 303 59 50 chr2 50239273 50239392 -203017191 - L2 LINE L2 -177 3095 2976 5801 241 82 125 chr2 50239460 50241798 -203014785 - L2 LINE L2 -2 3311 1166 1877 165 179 3 chr2 50241798 50242162 -203014421 - MSTC LTR MaLR 0 428 1 5801 241 82 125 chr2 50242162 50243250 -203013333 - L2 LINE L2 -2147 1166 33 557 256 133 73 chr2 50243293 50243676 -203012907 - L2 LINE L2 -648 2666 2261 338 246 101 22 chr2 50243674 50243812 -203012771 + MIR SINE MIR 79 227 -35 * 1886 114 4 0 chr2 50245118 50245380 -203011203 + AluSq SINE Alu 1 263 -50 2025 139 3 0 chr2 50245384 50245679 -203010904 - AluSx SINE Alu -16 296 1 208 259 0 0 chr2 50246177 50246231 -203010352 - MIR3 SINE MIR -1 207 154 419 278 9 0 chr2 50246459 50246567 -203010016 + L1ME2 LINE L1 6015 6123 -41 3420 138 70 2 chr2 50246710 50247225 -203009358 - MER41C LTR ERV1 -4 550 1 26 50 0 0 chr2 50247332 50247372 -203009211 + AT_rich Low_complexity Low_complexity 1 40 0 276 149 21 0 chr2 50247495 50247542 -203009041 - MIR3 SINE MIR -51 157 110 266 355 14 7 chr2 50247555 50247693 -203008890 + L2 LINE L2 2712 2850 -464 2552 253 70 56 chr2 50247788 50248849 -203007734 - HAL1 LINE L1 0 2507 1432 450 295 161 55 chr2 50248819 50248946 -203007637 - HAL1 LINE L1 -1554 953 841 * 3761 106 17 94 chr2 50248946 50249596 -203006987 + MER4A LTR ERV1 1 600 0 450 295 161 55 chr2 50249596 50250085 -203006498 - HAL1 LINE L1 -1666 841 272 418 354 84 54 chr2 50250225 50250558 -203006025 - L2 LINE L2 -1 3271 2929 289 244 176 59 chr2 50250562 50250620 -203005963 - L2 LINE L2 -1 3312 3262 1789 169 0 38 chr2 50250620 50250933 -203005650 - AluJo SINE Alu -11 301 1 289 244 176 59 chr2 50250933 50251112 -203005471 - L2 LINE L2 -51 3262 3047 2232 100 3 0 chr2 50251532 50251833 -203004750 - AluSg SINE Alu -8 302 1 23 0 0 0 chr2 50252256 50252279 -203004304 + AT_rich Low_complexity Low_complexity 1 23 0 5269 87 24 4 chr2 50253523 50254201 -203002382 + LTR8 LTR ERV1 1 691 0 353 281 126 7 chr2 50254366 50254501 -203002082 + MIR SINE MIR 2 152 -110 2019 204 16 78 chr2 50254787 50255360 -203001223 + MLT1F LTR MaLR 1 537 -5 22 35 0 0 chr2 50255545 50255574 -203001009 + AT_rich Low_complexity Low_complexity 1 29 0 830 240 16 31 chr2 50255592 50255784 -203000799 - MER5A DNA MER1_type 0 189 1 537 213 38 88 chr2 50255861 50255889 -203000694 + MIR SINE MIR 8 36 -226 2754 102 3 0 chr2 50255889 50256263 -203000320 - THE1C LTR MaLR 0 375 1 537 213 38 88 chr2 50256263 50256394 -203000189 + MIR SINE MIR 36 159 -103 287 217 72 0 chr2 50256407 50256476 -203000107 + MER91C DNA MER1_type 32 105 -35 1270 125 5 20 chr2 50256562 50256762 -202999821 + THE1A LTR MaLR 159 355 0 623 216 106 27 chr2 50256805 50257096 -202999487 + MSTD LTR MaLR 19 396 0 1518 206 61 30 chr2 50257511 50257611 -202998972 + L1MB8 LINE L1 5683 5779 -399 1342 215 115 81 chr2 50257611 50258131 -202998452 - MLT1F LTR MaLR 0 542 5 1518 206 61 30 chr2 50258131 50258458 -202998125 + L1MB8 LINE L1 5779 6123 -55 1546 216 65 51 chr2 50258479 50258993 -202997590 + L1MC4 LINE L1 6247 8042 0 400 254 35 0 chr2 50259175 50259289 -202997294 + MER5B DNA MER1_type 5 122 -56 3054 101 63 59 chr2 50259336 50259879 -202996704 - LTR10A LTR ERV1 -64 545 1 410 141 16 0 chr2 50259880 50259944 -202996639 + MER5B DNA MER1_type 114 178 0 380 241 0 23 chr2 50259960 50260047 -202996536 - MIR SINE MIR -110 152 68 21 0 0 0 chr2 50260842 50260863 -202995720 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr2 50261301 50261333 -202995250 + AT_rich Low_complexity Low_complexity 1 32 0 440 316 147 18 chr2 50261904 50262122 -202994461 - MIR SINE MIR -15 247 2 227 170 21 0 chr2 50262541 50262588 -202993995 - L1ME LINE L1 -503 5659 5612 751 295 65 22 chr2 50263172 50263572 -202993011 + L1ME3A LINE L1 5532 5948 -222 29 70 0 0 chr2 50263893 50263950 -202992633 + AT_rich Low_complexity Low_complexity 1 57 0 2349 103 0 0 chr2 50263956 50264258 -202992325 + AluSg SINE Alu 1 302 -8 310 280 0 0 chr2 50264305 50264380 -202992203 + L2 LINE L2 3239 3313 0 23 54 0 0 chr2 50265662 50265699 -202990884 + AT_rich Low_complexity Low_complexity 1 37 0 220 254 18 18 chr2 50265979 50266034 -202990549 + MIR3 SINE MIR 144 198 -10 1709 122 139 23 chr2 50266276 50266579 -202990004 + MER44D DNA MER2_type 1 608 -1 746 279 109 60 chr2 50267426 50268175 -202988408 + HAL1b LINE L1 67 852 -496 2270 113 0 3 chr2 50268289 50268600 -202987983 - AluSx SINE Alu 0 312 3 668 241 7 0 chr2 50268795 50268936 -202987647 + L1MC5 LINE L1 6633 6774 -1187 663 80 23 0 chr2 50268939 50269027 -202987556 - MLT1B LTR MaLR 0 467 378 * 1166 215 4 9 chr2 50269023 50269256 -202987327 - MLT1B LTR MaLR -157 233 2 1591 210 54 130 chr2 50269257 50269336 -202987247 + L1MC5 LINE L1 6773 6856 -1105 2182 116 17 0 chr2 50269336 50269637 -202986946 + AluSx SINE Alu 1 306 -6 1591 210 54 130 chr2 50269637 50270370 -202986213 + L1MC5 LINE L1 6856 7523 -438 310 249 34 98 chr2 50270480 50270685 -202985898 + L1ME3A LINE L1 5972 6163 -7 2422 84 0 0 chr2 50271964 50272260 -202984323 - AluSx SINE Alu -16 296 1 225 261 226 9 chr2 50272260 50272375 -202984208 - L2 LINE L2 -5 3308 3169 452 226 8 0 chr2 50272686 50272810 -202983773 + (TA)n Simple_repeat Simple_repeat 2 126 0 239 300 0 0 chr2 50272818 50272898 -202983685 + L1MC4 LINE L1 6616 6695 -1347 262 189 0 27 chr2 50272902 50272964 -202983619 + (TATG)n Simple_repeat Simple_repeat 2 63 -10 1044 156 0 6 chr2 50272964 50273131 -202983452 - FRAM SINE Alu 0 166 1 262 189 0 27 chr2 50273131 50273142 -202983441 + (TATG)n Simple_repeat Simple_repeat 63 73 0 218 192 110 27 chr2 50273746 50273819 -202982764 + L2 LINE L2 3235 3313 0 249 33 0 0 chr2 50275147 50275177 -202981406 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 425 248 94 0 chr2 50275178 50275295 -202981288 - L2 LINE L2 -10 3303 3176 370 250 58 0 chr2 50276087 50276191 -202980392 - MIR SINE MIR -5 257 148 250 186 0 0 chr2 50377235 50377278 -202879305 - MER66A LTR ERV1 -146 332 290 1798 127 10 7 chr2 50378729 50379029 -202877554 - AluSg SINE Alu -7 303 3 1751 174 1 46 chr2 50379029 50379255 -202877328 + L1MC/D LINE L1 5023 5258 -984 2348 73 3 0 chr2 50379255 50379558 -202877025 - AluY SINE Alu -7 304 1 1751 174 1 46 chr2 50379558 50379842 -202876741 + L1MC/D LINE L1 5258 5474 -768 2160 106 10 0 chr2 50379842 50380145 -202876438 + AluSx SINE Alu 1 306 -6 1751 174 1 46 chr2 50380145 50380273 -202876310 + L1MC/D LINE L1 5474 5606 -636 5005 36 4 120 chr2 50380409 50381215 -202875368 + SVA Other Other 685 1401 0 2173 115 0 3 chr2 50381403 50381716 -202874867 + AluSx SINE Alu 1 312 0 198 306 12 71 chr2 50381978 50382063 -202874520 + MIR SINE MIR 26 105 -103 2083 134 0 0 chr2 50382138 50382434 -202874149 + AluSq SINE Alu 1 299 -14 183 42 0 0 chr2 50382434 50382458 -202874125 + (CAGGA)n Simple_repeat Simple_repeat 2 25 0 2083 134 0 0 chr2 50382458 50382474 -202874109 + AluSq SINE Alu 298 313 0 441 90 0 0 chr2 50382510 50382577 -202874006 + (GGGAA)n Simple_repeat Simple_repeat 2 68 0 631 253 56 9 chr2 50382644 50382920 -202873663 + MLT1H LTR MaLR 15 303 -246 258 216 62 21 chr2 50382959 50383062 -202873521 + MLT1F LTR MaLR 389 524 -43 295 111 93 0 chr2 50383071 50383125 -202873458 - L1MB3 LINE L1 -10 6173 6115 2011 107 0 23 chr2 50383145 50383444 -202873139 - AluSx SINE Alu -20 292 1 2331 151 5 0 chr2 50383446 50383829 -202872754 - L1MB3 LINE L1 -56 6127 5743 180 320 56 40 chr2 50384047 50384172 -202872411 + L2 LINE L2 3139 3265 -7 310 66 0 98 chr2 50384825 50384906 -202871677 + L1PA16 LINE L1 6104 6178 0 340 279 25 16 chr2 50385208 50385330 -202871253 + MIR SINE MIR 79 201 -61 242 116 23 0 chr2 50385333 50385376 -202871207 + (TA)n Simple_repeat Simple_repeat 2 45 0 2060 123 7 3 chr2 50385406 50385707 -202870876 - AluSq SINE Alu -9 304 3 2175 106 6 3 chr2 50386083 50386394 -202870189 - AluSx SINE Alu 0 312 1 305 248 171 29 chr2 50386800 50386905 -202869678 + MIR3 SINE MIR 35 154 -54 2065 116 3 3 chr2 50387039 50387350 -202869233 + AluSx SINE Alu 1 311 -1 381 347 18 18 chr2 50387683 50387853 -202868730 + L3 LINE CR1 1047 1216 -361 560 299 102 34 chr2 50387880 50388174 -202868409 - L3 LINE CR1 -25 1552 1239 273 322 25 17 chr2 50388572 50388690 -202867893 - MIR3 SINE MIR -9 199 81 194 233 0 23 chr2 50388822 50388865 -202867718 - L2 LINE L2 -1 3271 3230 771 161 0 16 chr2 50388973 50389097 -202867486 + FLAM_C SINE Alu 1 122 -21 232 337 162 23 chr2 50389464 50389773 -202866810 - L2 LINE L2 -371 2943 2592 2116 121 0 3 chr2 50390992 50391305 -202865278 + AluSx SINE Alu 1 312 0 2067 133 0 0 chr2 50392008 50392309 -202864274 + AluSx SINE Alu 2 302 -10 1174 296 6 104 chr2 50392564 50392899 -202863684 + AluSx SINE Alu 1 302 0 1892 146 3 0 chr2 50392956 50393250 -202863333 - AluSx SINE Alu -17 295 1 728 272 22 11 chr2 50393376 50393560 -202863023 - MIR SINE MIR -66 196 11 2070 112 3 50 chr2 50394150 50394472 -202862111 - AluSq SINE Alu -6 307 1 1862 135 3 14 chr2 50394509 50394806 -202861777 - AluSx SINE Alu -18 294 1 2920 157 66 17 chr2 50394900 50395429 -202861154 - MER21A LTR ERV1 0 931 377 1026 77 118 24 chr2 50395484 50395653 -202860930 - MER21A LTR ERV1 -746 185 1 1422 142 104 19 chr2 50396110 50396370 -202860213 + AluSg SINE Alu 10 291 -19 597 260 134 89 chr2 50396395 50396656 -202859927 + L1 LINE L1 2961 3209 -2937 1754 159 0 3 chr2 50396656 50396946 -202859637 + AluJo SINE Alu 1 289 -23 1674 147 3 63 chr2 50396956 50397275 -202859308 + AluSx SINE Alu 1 300 -12 597 260 134 89 chr2 50397275 50397617 -202858966 + L1 LINE L1 3217 3542 -2604 1932 122 7 16 chr2 50397617 50397921 -202858662 + AluSg SINE Alu 1 301 -9 597 260 134 89 chr2 50397921 50397994 -202858589 + L1 LINE L1 3542 3610 -2536 2196 115 0 3 chr2 50397994 50398307 -202858276 - AluSx SINE Alu 0 312 1 597 260 134 89 chr2 50398307 50399039 -202857544 + L1 LINE L1 3610 4446 -1700 564 254 62 23 chr2 50399248 50399302 -202857281 - MIR SINE MIR 0 262 212 2289 105 0 0 chr2 50399302 50399607 -202856976 - AluSx SINE Alu -6 306 2 564 254 62 23 chr2 50399607 50399729 -202856854 - MIR SINE MIR -50 212 79 1851 143 3 3 chr2 50399769 50400069 -202856514 - AluJb SINE Alu -12 300 1 577 121 55 0 chr2 50400220 50400311 -202856272 - AluS SINE Alu -217 96 1 958 216 153 0 chr2 50401092 50401333 -202855250 - AluSx SINE Alu -30 282 5 23 0 0 0 chr2 50401386 50401409 -202855174 + AT_rich Low_complexity Low_complexity 1 23 0 501 291 200 5 chr2 50401433 50401643 -202854940 + MIR SINE MIR 12 262 0 2223 103 3 0 chr2 50401805 50402106 -202854477 + AluSp SINE Alu 1 302 -11 1728 130 98 3 chr2 50402182 50402467 -202854116 - AluSq SINE Alu -1 312 1 2052 90 7 0 chr2 50402471 50402772 -202853811 - AluSg SINE Alu 0 303 1 707 197 8 0 chr2 50402774 50402901 -202853682 - AluJo/FLAM SINE Alu -173 129 2 387 0 0 0 chr2 50403483 50403526 -202853057 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 1890 118 4 4 chr2 50403526 50403806 -202852777 - AluSx SINE Alu -32 280 1 357 109 0 0 chr2 50405695 50405750 -202850833 + (GGA)n Simple_repeat Simple_repeat 3 57 0 2576 46 16 11 chr2 50405935 50406305 -202850278 - SVA Other Other -1013 373 2 284 0 0 27 chr2 50406306 50406343 -202850240 + (GGGAGA)n Simple_repeat Simple_repeat 1 36 0 557 242 0 8 chr2 50406346 50406470 -202850113 - MLT1F LTR MaLR -419 123 1 1471 165 39 11 chr2 50407351 50407473 -202849110 + AluJb SINE Alu 1 118 -194 192 40 0 0 chr2 50407473 50407498 -202849085 + (CA)n Simple_repeat Simple_repeat 2 26 0 1471 165 39 11 chr2 50407498 50407654 -202848929 + AluJb SINE Alu 118 287 -25 418 152 16 37 chr2 50407865 50407980 -202848603 + MER5B DNA MER1_type 1 171 -7 767 174 45 13 chr2 50407995 50408150 -202848433 - MER5A DNA MER1_type 0 189 30 2095 139 0 16 chr2 50409968 50410285 -202846298 + AluSx SINE Alu 1 312 0 2087 114 4 0 chr2 50411279 50411603 -202844980 + AluSg SINE Alu 1 325 0 25 0 0 0 chr2 50412267 50412292 -202844291 + AT_rich Low_complexity Low_complexity 1 25 0 1936 93 0 48 chr2 50413362 50413632 -202842951 + AluSx SINE Alu 43 299 -13 4288 153 36 1 chr2 50414140 50414837 -202841746 + L1PA16 LINE L1 5424 6144 -22 968 146 174 35 chr2 50414904 50415192 -202841391 - Charlie1a DNA MER1_type -3 1452 1125 5068 201 25 22 chr2 50415209 50415241 -202841342 - L1MA9 LINE L1 -44 6268 6238 252 0 0 0 chr2 50415241 50415269 -202841314 + (TAGA)n Simple_repeat Simple_repeat 4 31 0 5068 201 25 22 chr2 50415269 50416356 -202840227 - L1MA9 LINE L1 -74 6238 5156 1627 211 0 0 chr2 50416356 50416664 -202839919 - AluJo SINE Alu 0 308 1 5068 201 25 22 chr2 50416664 50417363 -202839220 - L1MA9 LINE L1 -1156 5156 4438 1597 171 0 4 chr2 50417363 50417621 -202838962 - AluJb SINE Alu -21 291 35 5068 201 25 22 chr2 50417621 50417814 -202838769 - L1MA9 LINE L1 -1874 4438 4247 535 177 0 0 chr2 50417790 50417886 -202838697 - L1MA9 LINE L1 -2577 3569 3474 * 980 165 85 0 chr2 50417887 50418063 -202838520 - Charlie1a DNA MER1_type -314 1141 951 4231 83 29 25 chr2 50418171 50419183 -202837400 - SVA Other Other -518 868 252 2189 102 7 16 chr2 50419395 50419700 -202836883 + AluSp SINE Alu 2 303 -10 1517 145 40 0 chr2 50420364 50420591 -202835992 + MER46A DNA MER2_type 1 236 0 492 304 28 18 chr2 50420633 50420686 -202835897 - MIR SINE MIR -52 210 159 2003 186 25 6 chr2 50420686 50421041 -202835542 - MLT1A1 LTR MaLR 0 365 4 492 304 28 18 chr2 50421041 50421192 -202835391 - MIR SINE MIR -103 159 9 1144 196 15 0 chr2 50423003 50423207 -202833376 - MER20 DNA MER1_type -12 207 1 2351 103 0 0 chr2 50423312 50423613 -202832970 - AluSx SINE Alu -11 301 1 321 289 173 36 chr2 50423903 50424128 -202832455 - MIR SINE MIR -5 257 2 1620 192 10 19 chr2 50425139 50425451 -202831132 - AluSx SINE Alu -3 309 1 853 196 101 11 chr2 50425654 50425833 -202830750 - MLT1A1 LTR MaLR -11 354 160 1490 17 0 6 chr2 50425858 50426036 -202830547 + (TTC)n Simple_repeat Simple_repeat 3 179 0 649 124 8 16 chr2 50426036 50426157 -202830426 + (TTCTCC)n Simple_repeat Simple_repeat 3 122 0 2384 109 0 0 chr2 50426174 50426485 -202830098 - AluSx SINE Alu -1 311 1 2631 55 0 0 chr2 50426495 50426804 -202829779 - AluY SINE Alu -2 309 1 912 170 0 0 chr2 50426811 50426958 -202829625 - MLT1A1 LTR MaLR -218 147 1 276 146 73 0 chr2 50427246 50427301 -202829282 - MIR SINE MIR -94 168 110 850 164 7 7 chr2 50427492 50427632 -202828951 - MER67A LTR ERV1 0 543 404 2012 94 0 0 chr2 50427633 50427887 -202828696 - AluSx SINE Alu -17 295 42 1204 88 0 0 chr2 50427887 50428035 -202828548 - AluSq/x SINE Alu -164 148 1 1884 165 106 23 chr2 50428036 50428423 -202828160 - MER67A LTR ERV1 -124 419 1 2158 107 30 0 chr2 50428855 50429155 -202827428 - AluSx SINE Alu -3 309 1 568 275 81 45 chr2 50430472 50430694 -202825889 + MIR SINE MIR 28 257 -5 894 186 216 0 chr2 50431213 50431407 -202825176 - MER46A DNA MER2_type 0 236 1 2172 120 3 7 chr2 50431505 50431805 -202824778 + AluSx SINE Alu 1 299 -13 2119 106 22 29 chr2 50432296 50432608 -202823975 - AluSx SINE Alu -2 310 1 222 203 94 0 chr2 50432777 50432841 -202823742 + MIR SINE MIR 30 99 -109 2330 95 0 0 chr2 50433334 50433629 -202822954 + AluSg SINE Alu 1 295 -15 624 181 19 0 chr2 50434695 50434800 -202821783 + FLAM_A SINE Alu 28 134 -8 249 158 0 70 chr2 50434879 50434936 -202821647 - L3b LINE CR1 -7 1576 1524 2979 144 26 49 chr2 50435120 50435545 -202821038 + L1MB7 LINE L1 5630 6040 -144 2368 110 0 0 chr2 50435545 50435853 -202820730 + AluSx SINE Alu 1 308 -4 2979 144 26 49 chr2 50435853 50435995 -202820588 + L1MB7 LINE L1 6040 6184 0 2784 186 10 8 chr2 50436307 50436823 -202819760 - L1MB1 LINE L1 -5 6163 5647 2325 78 3 0 chr2 50436823 50437143 -202819440 + AluSp SINE Alu 1 321 0 1087 175 157 21 chr2 50437272 50437552 -202819031 - Charlie1a DNA MER1_type -680 775 458 10392 181 19 23 chr2 50437556 50438717 -202817866 - L1PA16 LINE L1 0 6869 5704 3796 135 25 23 chr2 50438717 50438802 -202817781 - LTR38B LTR ERV1 0 610 527 2333 92 3 0 chr2 50438802 50439094 -202817489 + AluSg SINE Alu 1 293 -17 3796 135 25 23 chr2 50439094 50439617 -202816966 - LTR38B LTR ERV1 -83 527 1 10392 181 19 23 chr2 50439617 50441800 -202814783 - L1PA16 LINE L1 -1165 5704 3552 183 42 0 0 chr2 50441827 50441851 -202814732 + (TTTTTG)n Simple_repeat Simple_repeat 5 28 0 2188 103 10 0 chr2 50442225 50442516 -202814067 - AluSg SINE Alu -11 299 6 3455 176 39 37 chr2 50443312 50443958 -202812625 - L1PA16 LINE L1 -3326 3523 2840 2068 125 7 0 chr2 50443958 50444246 -202812337 - AluSx SINE Alu -17 295 6 3455 176 39 37 chr2 50444246 50444701 -202811882 - L1PA16 LINE L1 -4009 2840 2387 * 8085 181 4 8 chr2 50444697 50446047 -202810536 - L1PA16 LINE L1 -5493 1356 13 1349 210 66 122 chr2 50446050 50446549 -202810034 - Charlie1a DNA MER1_type -984 471 1 613 177 77 46 chr2 50446558 50446688 -202809895 + MER94 DNA DNA 1 134 0 1992 165 42 12 chr2 50447262 50447662 -202808921 + L1PA14 LINE L1 2936 3347 -2799 11819 173 23 13 chr2 50447674 50450545 -202806038 + L1PA14 LINE L1 3235 6158 -3 21 36 0 0 chr2 50450698 50450726 -202805857 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr2 50451920 50451945 -202804638 + AT_rich Low_complexity Low_complexity 1 25 0 2336 103 0 3 chr2 50452413 50452714 -202803869 + AluSq SINE Alu 1 300 -13 1317 191 129 52 chr2 50453448 50453534 -202803049 + AluJo SINE Alu 1 79 -223 2288 95 7 7 chr2 50453534 50453839 -202802744 - AluSx SINE Alu -7 305 1 1317 191 129 52 chr2 50453839 50454024 -202802559 + AluJo SINE Alu 79 293 -9 877 290 40 15 chr2 50454250 50454574 -202802009 - L1MC/D LINE L1 -2021 5787 5456 2431 59 0 0 chr2 50455499 50455788 -202800795 - AluY SINE Alu -22 289 1 2284 104 0 0 chr2 50456260 50456568 -202800015 - AluSq SINE Alu -5 308 1 323 200 0 40 chr2 50456600 50456632 -202799951 - L1 LINE L1 -1110 5036 5004 1970 134 20 10 chr2 50456632 50456930 -202799653 - AluSx SINE Alu -11 301 1 323 200 0 40 chr2 50456930 50456972 -202799611 - L1 LINE L1 -1142 5004 4965 1135 139 61 0 chr2 50456972 50457152 -202799431 - MER30 DNA MER1_type 0 230 40 486 108 0 0 chr2 50457157 50457231 -202799352 + (TCC)n Simple_repeat Simple_repeat 3 76 0 1846 146 16 19 chr2 50457234 50457542 -202799041 - AluSx SINE Alu -5 307 1 339 146 0 0 chr2 50457546 50457594 -202798989 - MER30 DNA MER1_type -182 48 1 294 262 0 0 chr2 50457594 50457655 -202798928 - L1 LINE L1 -1174 4972 4912 2178 127 0 3 chr2 50457656 50457956 -202798627 - AluSp SINE Alu -14 299 1 460 95 0 0 chr2 50457959 50458022 -202798561 - Alu SINE Alu -11 299 237 3005 225 45 34 chr2 50458022 50458572 -202798011 - L1 LINE L1 -3127 3019 2456 1939 143 0 3 chr2 50458572 50458859 -202797724 - AluSx SINE Alu -26 286 1 3005 225 45 34 chr2 50458859 50459130 -202797453 - L1 LINE L1 -3690 2456 2189 1836 164 3 3 chr2 50461746 50462039 -202794544 - AluJb SINE Alu -19 293 1 201 132 0 0 chr2 50462354 50462392 -202794191 + (TCCA)n Simple_repeat Simple_repeat 1 38 0 2244 102 7 0 chr2 50462396 50462699 -202793884 - AluSg SINE Alu -5 305 1 301 383 75 0 chr2 50462699 50462806 -202793777 - L2 LINE L2 -3 3269 3155 2104 104 21 0 chr2 50462938 50463218 -202793365 - AluSx SINE Alu -26 286 1 469 207 69 109 chr2 50463219 50463393 -202793190 + MER5B DNA MER1_type 12 178 0 2177 118 0 3 chr2 50463895 50464199 -202792384 - AluSx SINE Alu -9 303 1 415 282 48 117 chr2 50464920 50465193 -202791390 - L2 LINE L2 0 3272 3019 360 342 158 7 chr2 50465698 50465850 -202790733 + MER5B DNA MER1_type 4 178 0 2101 118 0 0 chr2 50465934 50466241 -202790342 - AluSg SINE Alu 0 307 1 249 266 43 53 chr2 50466778 50466872 -202789711 - MER5A DNA MER1_type -87 102 10 1456 168 8 19 chr2 50467049 50467305 -202789278 - AluJb SINE Alu -58 254 2 24 32 0 0 chr2 50467334 50467365 -202789218 + AT_rich Low_complexity Low_complexity 1 31 0 215 205 0 0 chr2 50467614 50467653 -202788930 + GA-rich Low_complexity Low_complexity 1 39 0 487 200 32 32 chr2 50468554 50468679 -202787904 - MIR SINE MIR -42 220 96 216 0 0 0 chr2 50469288 50469312 -202787271 + (CA)n Simple_repeat Simple_repeat 2 25 0 50 95 0 0 chr2 50469835 50469983 -202786600 + AT_rich Low_complexity Low_complexity 1 148 0 27 0 0 0 chr2 50470027 50470054 -202786529 + AT_rich Low_complexity Low_complexity 1 27 0 185 94 31 0 chr2 50470578 50470610 -202785973 + (TG)n Simple_repeat Simple_repeat 1 33 0 347 139 28 14 chr2 50470894 50470966 -202785617 - MER103 DNA DNA -80 86 14 1967 135 24 0 chr2 50471088 50471247 -202785336 - AluSx SINE Alu -17 295 124 333 0 0 0 chr2 50471247 50471284 -202785299 + (TTA)n Simple_repeat Simple_repeat 2 38 0 1967 135 24 0 chr2 50471284 50471412 -202785171 - AluSx SINE Alu -188 124 1 917 150 0 8 chr2 50471433 50471566 -202785017 - AluSq/x SINE Alu -181 132 1 2245 102 0 3 chr2 50471772 50472066 -202784517 - AluSg SINE Alu -17 293 1 30 0 0 0 chr2 50472201 50472231 -202784352 + AT_rich Low_complexity Low_complexity 1 30 0 318 49 0 0 chr2 50472231 50472272 -202784311 - MER4E LTR ERV1 -72 694 654 975 249 96 16 chr2 50472570 50472883 -202783700 + LTR16A LTR ERVL 113 450 0 685 246 73 44 chr2 50473104 50473376 -202783207 - L2 LINE L2 -40 3273 2994 278 93 0 0 chr2 50473389 50473432 -202783151 + MADE1 DNA Mariner 1 43 -37 27 29 0 0 chr2 50474726 50474760 -202781823 + AT_rich Low_complexity Low_complexity 1 34 0 27 0 0 0 chr2 50475324 50475351 -202781232 + AT_rich Low_complexity Low_complexity 1 27 0 2064 112 7 13 chr2 50475499 50475804 -202780779 - AluSx SINE Alu -9 303 1 2410 69 0 66 chr2 50477420 50477753 -202778830 + AluY SINE Alu 1 311 0 2885 255 98 32 chr2 50479905 50480551 -202776032 - L2 LINE L2 -20 3293 2691 1759 158 50 36 chr2 50480551 50480911 -202775672 - MLT1A1 LTR MaLR 0 365 1 2885 255 98 32 chr2 50480911 50481618 -202774965 - L2 LINE L2 -622 2691 1835 1663 199 43 63 chr2 50481640 50482098 -202774485 - MER34 LTR ERV1 0 542 95 2243 175 49 0 chr2 50482098 50482504 -202774079 - MSTB LTR MaLR 0 426 1 1663 199 43 63 chr2 50482504 50482598 -202773985 - MER34 LTR ERV1 -447 95 1 2068 127 0 7 chr2 50482604 50482895 -202773688 - AluSq SINE Alu -21 292 4 254 215 123 0 chr2 50482903 50482968 -202773615 - L2 LINE L2 -1523 1791 1719 406 234 19 0 chr2 50483570 50483677 -202772906 - MER97b DNA MER1_type? -194 859 751 1949 153 14 34 chr2 50484186 50484540 -202772043 - MER7A DNA MER2_type -1 345 1 2404 193 68 64 chr2 50484713 50484932 -202771651 - MER97b DNA MER1_type? -303 750 533 2028 139 0 0 chr2 50484932 50485241 -202771342 + AluSx SINE Alu 1 309 0 2071 100 3 53 chr2 50485243 50485562 -202771021 + AluSx SINE Alu 1 303 -9 2404 193 68 64 chr2 50485562 50486085 -202770498 - MER97b DNA MER1_type? -520 533 1 1843 136 4 0 chr2 50486153 50486418 -202770165 + AluSx SINE Alu 1 266 -46 617 275 28 16 chr2 50486440 50486622 -202769961 - L2 LINE L2 -1668 1646 1463 2090 154 0 0 chr2 50486776 50487088 -202769495 - AluSx SINE Alu 0 312 1 335 316 32 87 chr2 50488026 50488279 -202768304 + L2 LINE L2 2836 3074 -198 266 306 45 45 chr2 50488645 50488756 -202767827 - L2 LINE L2 -4 3268 3158 24 53 0 0 chr2 50488825 50488863 -202767720 + AT_rich Low_complexity Low_complexity 1 38 0 1846 135 39 4 chr2 50489025 50489306 -202767277 - AluSx SINE Alu -21 291 1 1607 200 55 6 chr2 50489588 50489953 -202766630 - L1MDa LINE L1 -6124 416 34 2270 99 13 0 chr2 50490913 50491216 -202765367 - AluSx SINE Alu -5 307 1 854 178 7 7 chr2 50491684 50491830 -202764753 + FRAM SINE Alu 1 146 -30 1232 276 62 12 chr2 50492075 50492507 -202764076 - MLT1F1 LTR MaLR -4 563 110 6634 65 31 35 chr2 50492516 50493444 -202763139 - SVA Other Other -9 1377 453 21 36 0 0 chr2 50493674 50493702 -202762881 + AT_rich Low_complexity Low_complexity 1 28 0 315 151 0 0 chr2 50493742 50493795 -202762788 - L1ME4a LINE L1 -100 6021 5969 637 115 10 0 chr2 50494630 50494734 -202761849 - L1MB2 LINE L1 -2 6169 6065 21 0 0 0 chr2 50495264 50495285 -202761298 + AT_rich Low_complexity Low_complexity 1 21 0 359 327 161 23 chr2 50495949 50496166 -202760417 + MIR SINE MIR 12 258 -4 1007 137 22 0 chr2 50496537 50496719 -202759864 - L1MB4 LINE L1 -195 5985 5800 464 279 188 19 chr2 50496890 50497098 -202759485 + MIR SINE MIR 12 254 -8 509 259 72 0 chr2 50497695 50497861 -202758722 - MER5B DNA MER1_type 0 178 1 23 0 0 0 chr2 50498868 50498891 -202757692 + AT_rich Low_complexity Low_complexity 1 23 0 1149 123 0 0 chr2 50499765 50499920 -202756663 + AluSq SINE Alu 1 155 -158 2206 75 41 0 chr2 50500028 50500323 -202756260 + AluY SINE Alu 1 307 -4 1475 204 156 66 chr2 50500338 50500738 -202755845 - L1ME1 LINE L1 -11 6155 5682 1896 105 94 14 chr2 50500738 50501024 -202755559 + AluSx SINE Alu 1 309 -3 1475 204 156 66 chr2 50501024 50501225 -202755358 - L1ME1 LINE L1 -484 5682 5500 2075 221 38 65 chr2 50501236 50501480 -202755103 - L1ME1 LINE L1 -964 5182 4933 1844 123 58 4 chr2 50501480 50501757 -202754826 - AluSx SINE Alu -18 294 3 2075 221 38 65 chr2 50501757 50502339 -202754244 - L1ME1 LINE L1 -1213 4933 4379 31 0 0 0 chr2 50502396 50502427 -202754156 + AT_rich Low_complexity Low_complexity 1 31 0 626 203 0 47 chr2 50502440 50502568 -202754015 - FLAM_C SINE Alu -21 122 1 270 279 0 0 chr2 50502599 50502678 -202753905 - L1ME LINE L1 -510 5611 5533 25 31 0 0 chr2 50502759 50502791 -202753792 + AT_rich Low_complexity Low_complexity 1 32 0 4139 189 34 21 chr2 50502791 50504156 -202752427 - L1MB3 LINE L1 -42 6141 4758 5282 137 13 3 chr2 50504178 50505309 -202751274 - L1PA16 LINE L1 -9 6860 5724 1033 170 0 0 chr2 50505409 50505603 -202750980 - L1MB3 LINE L1 -1317 4829 4636 1088 196 18 0 chr2 50505607 50505888 -202750695 - L1PA16 LINE L1 -2625 4224 3939 * 2625 137 24 0 chr2 50505883 50506335 -202750248 - L1PA16 LINE L1 -4208 2641 2179 2097 245 44 24 chr2 50506329 50507620 -202748963 - L1MCa LINE L1 -1364 5577 4061 * 1831 164 13 7 chr2 50507620 50507924 -202748659 - AluSx SINE Alu -6 306 1 2097 245 44 24 chr2 50507924 50508226 -202748357 - L1MCa LINE L1 -2880 4061 3767 2207 118 16 0 chr2 50508231 50508537 -202748046 - AluSq SINE Alu -2 311 1 1663 226 62 12 chr2 50508537 50509479 -202747104 - L1MCa LINE L1 -3657 3284 2208 305 200 63 42 chr2 50509479 50509574 -202747009 - MER31A LTR ERV1 -26 459 363 784 205 5 41 chr2 50509584 50509779 -202746804 - L1MCa LINE L1 -4729 2214 2027 22 0 0 0 chr2 50509780 50509802 -202746781 + AT_rich Low_complexity Low_complexity 1 22 0 1498 154 8 8 chr2 50509802 50510062 -202746521 + L1PA15 LINE L1 5900 6159 -6 1749 178 0 7 chr2 50510135 50510421 -202746162 + AluJo SINE Alu 1 284 -28 1631 164 102 0 chr2 50510621 50510896 -202745687 - AluJo SINE Alu -9 303 1 3833 252 73 31 chr2 50510896 50511898 -202744685 - L1 LINE L1 -1759 4387 3428 1882 145 0 3 chr2 50511898 50512205 -202744378 - AluSx SINE Alu 0 306 1 3833 252 73 31 chr2 50512205 50513179 -202743404 - L1 LINE L1 -2718 3428 2230 1912 117 0 18 chr2 50513179 50513453 -202743130 - AluSg SINE Alu -2 308 40 3833 252 73 31 chr2 50513453 50513556 -202743027 - L1 LINE L1 -3916 2230 2133 384 40 0 0 chr2 50513568 50513618 -202742965 + (TG)n Simple_repeat Simple_repeat 2 51 0 604 200 154 39 chr2 50513794 50513961 -202742622 - L1MCa LINE L1 -4899 1524 1315 1425 174 60 39 chr2 50513961 50514242 -202742341 - AluJo SINE Alu -25 287 1 604 200 154 39 chr2 50514242 50514334 -202742249 - L1MCa LINE L1 -5108 1315 1235 296 200 41 27 chr2 50514397 50514517 -202742066 - L1MCa LINE L1 -6303 637 36 797 187 49 2 chr2 50515027 50515207 -202741376 - L1MB4 LINE L1 -171 6009 5817 2184 75 0 14 chr2 50515539 50515861 -202740722 + AluY SINE Alu 7 324 0 1818 151 6 3 chr2 50515990 50516308 -202740275 - L1MB4 LINE L1 -2 6178 5860 25 0 0 0 chr2 50516502 50516527 -202740056 + AT_rich Low_complexity Low_complexity 1 25 0 1680 157 50 4 chr2 50517094 50517375 -202739208 + AluSx SINE Alu 1 294 -18 574 253 51 74 chr2 50517608 50517803 -202738780 - MIR SINE MIR 0 262 73 2042 138 7 0 chr2 50517803 50518105 -202738478 - AluSx SINE Alu 0 304 1 574 253 51 74 chr2 50518105 50518163 -202738420 - MIR SINE MIR -189 73 15 1790 182 0 3 chr2 50518175 50518482 -202738101 - AluSx SINE Alu -1 311 6 2076 149 11 57 chr2 50519754 50520209 -202736374 - L1MB8 LINE L1 -16 6162 5729 1208 207 89 75 chr2 50520209 50520343 -202736240 - MER39 LTR ERV1 -1 706 575 2186 89 34 0 chr2 50520343 50520635 -202735948 - AluY SINE Alu -9 302 1 1208 207 89 75 chr2 50520635 50520940 -202735643 - MER39 LTR ERV1 -132 575 261 269 223 39 78 chr2 50520914 50521017 -202735566 - LTR48B LTR ERV1 -542 102 4 * 1684 189 41 0 chr2 50521022 50521339 -202735244 - L1MB8 LINE L1 -453 5731 5402 237 189 0 0 chr2 50522158 50522195 -202734388 - tRNA-Met-i tRNA tRNA -38 37 1 368 286 188 0 chr2 50522222 50522355 -202734228 + MER5A DNA MER1_type 32 189 0 183 177 13 25 chr2 50522818 50522897 -202733686 + (TA)n Simple_repeat Simple_repeat 2 79 0 893 244 122 26 chr2 50523081 50523426 -202733157 - L1MC4a LINE L1 -1884 5924 5547 317 227 7 15 chr2 50523461 50523592 -202732991 - L1MC4a LINE L1 -954 5390 5260 215 127 0 18 chr2 50523782 50523837 -202732746 + (TA)n Simple_repeat Simple_repeat 2 55 0 403 297 91 35 chr2 50523840 50524267 -202732316 - L1MC4a LINE L1 -1130 5016 4566 1634 255 155 26 chr2 50524278 50524961 -202731622 - L2 LINE L2 -221 3092 2328 288 0 0 0 chr2 50524962 50524994 -202731589 + (TG)n Simple_repeat Simple_repeat 2 33 0 573 287 39 6 chr2 50525728 50525951 -202730632 + L2 LINE L2 2804 3034 -279 275 311 0 11 chr2 50525962 50526052 -202730531 + L2 LINE L2 3144 3232 -81 280 296 91 0 chr2 50526097 50526185 -202730398 + L2 LINE L2 3176 3271 -1 573 218 44 83 chr2 50528701 50528930 -202727653 + MER112 DNA MER1_type 1 220 -40 397 169 0 42 chr2 50529288 50529406 -202727177 + C-rich Low_complexity Low_complexity 5 117 0 855 161 0 7 chr2 50529527 50529664 -202726919 - AluJb SINE Alu -176 136 1 23 0 0 0 chr2 50530861 50530884 -202725699 + AT_rich Low_complexity Low_complexity 1 23 0 1709 180 10 7 chr2 50530884 50531160 -202725423 + AluJb SINE Alu 1 280 -32 198 0 0 0 chr2 50531160 50531182 -202725401 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 1709 180 10 7 chr2 50531182 50531205 -202725378 + AluJb SINE Alu 280 301 -11 2041 138 0 20 chr2 50531683 50531987 -202724596 - AluJo SINE Alu -14 298 1 1445 193 75 59 chr2 50532610 50533034 -202723549 + L1ME2 LINE L1 5721 6151 -13 430 323 116 17 chr2 50533342 50533574 -202723009 + MIR SINE MIR 2 256 -6 31 58 0 0 chr2 50533723 50533775 -202722808 + AT_rich Low_complexity Low_complexity 1 52 0 1141 143 77 0 chr2 50534047 50534229 -202722354 + MER3 DNA MER1_type 13 208 -1 864 213 164 4 chr2 50534239 50534507 -202722076 - MER5C DNA MER1_type -2 322 12 200 206 0 0 chr2 50536003 50536037 -202720546 + (CATATA)n Simple_repeat Simple_repeat 5 38 0 310 227 0 13 chr2 50536037 50536112 -202720471 - L1MCa LINE L1 -4358 2068 1995 * 330 289 0 11 chr2 50536082 50536172 -202720411 - L1MC4 LINE L1 -1339 6983 6895 347 336 44 50 chr2 50536618 50536661 -202719922 + L2 LINE L2 2550 2592 -722 2206 105 3 3 chr2 50536661 50536966 -202719617 - AluSc SINE Alu -4 305 1 347 336 44 50 chr2 50536966 50537220 -202719363 + L2 LINE L2 2592 2845 -469 726 300 49 7 chr2 50537226 50537462 -202719121 + MIR SINE MIR 4 246 -16 481 370 77 47 chr2 50537493 50537896 -202718687 + L2 LINE L2 2856 3270 -2 2415 96 0 0 chr2 50538517 50538818 -202717765 + AluSx SINE Alu 1 301 -11 378 323 68 19 chr2 50538818 50538979 -202717604 - MIR3 SINE MIR -34 174 6 613 266 25 13 chr2 50538983 50539141 -202717442 + MER5A DNA MER1_type 1 160 -29 1463 175 110 37 chr2 50541900 50542380 -202714203 - L1PA16 LINE L1 -629 5536 5021 3288 141 95 8 chr2 50542380 50542978 -202713605 + L1PA16 LINE L1 5513 6165 -1 219 255 155 25 chr2 50543873 50544073 -202712510 + L2 LINE L2 2626 2851 -463 459 358 67 27 chr2 50544112 50544442 -202712141 + L2 LINE L2 2915 3257 -15 722 229 51 40 chr2 50544699 50544952 -202711631 - MER112 DNA MER1_type 0 256 1 21 0 0 0 chr2 50545780 50545801 -202710782 + AT_rich Low_complexity Low_complexity 1 21 0 2157 51 65 4 chr2 50545803 50546079 -202710504 - AluY SINE Alu -18 293 1 284 253 0 48 chr2 50546307 50546390 -202710193 + CT-rich Low_complexity Low_complexity 6 84 0 1313 285 53 9 chr2 50548194 50548781 -202707802 + L2 LINE L2 2704 3313 0 458 264 85 50 chr2 50548805 50549006 -202707577 + L2 LINE L2 3104 3311 -2 6998 56 2 4 chr2 50549221 50550489 -202706094 - L1PA6 LINE L1 0 6154 4895 7367 67 1 2 chr2 50550490 50551454 -202705129 - L1PA6 LINE L1 -1640 4506 3544 677 313 105 26 chr2 50601538 50602005 -202654578 + LTR33 LTR ERVL 16 519 -2 329 296 80 25 chr2 50602226 50602388 -202654195 + MIR SINE MIR 47 217 -45 414 176 27 0 chr2 50603032 50603106 -202653477 - MER5B DNA MER1_type -1 177 102 2293 117 129 21 chr2 50603289 50603675 -202652908 + MSTB1 LTR MaLR 5 432 0 490 224 26 83 chr2 50605375 50605531 -202651052 + MER103 DNA DNA 1 147 -19 324 0 0 0 chr2 50606083 50606119 -202650464 + (CA)n Simple_repeat Simple_repeat 2 37 0 301 240 58 99 chr2 50607151 50607237 -202649346 + MIR SINE MIR 5 82 -180 2579 133 64 10 chr2 50607237 50607643 -202648940 - MSTA LTR MaLR 0 428 1 301 240 58 99 chr2 50607643 50607727 -202648856 + MIR SINE MIR 82 168 -94 226 301 74 61 chr2 50609292 50609455 -202647128 + MER5A DNA MER1_type 21 185 -4 26 0 0 0 chr2 50610221 50610247 -202646336 + AT_rich Low_complexity Low_complexity 1 26 0 245 324 103 15 chr2 50610338 50610474 -202646109 + MIR SINE MIR 45 192 -70 6400 99 11 0 chr2 50610873 50611765 -202644818 + L1PA14 LINE L1 5249 6152 -9 1707 137 6 82 chr2 50612011 50612326 -202644257 + AluJb SINE Alu 1 291 -21 34 0 0 0 chr2 50612722 50612756 -202643827 + AT_rich Low_complexity Low_complexity 1 34 0 1842 167 0 16 chr2 50613626 50613932 -202642651 - AluJb SINE Alu -11 301 1 462 310 129 16 chr2 50617173 50617483 -202639100 - L2 LINE L2 -338 2976 2632 247 297 63 45 chr2 50617611 50617722 -202638861 - L2 LINE L2 -1 3312 3200 351 272 83 41 chr2 50618071 50618221 -202638362 + L3 LINE CR1 932 1091 -486 831 233 0 13 chr2 50618221 50618380 -202638203 - FRAM SINE Alu -8 158 2 351 272 83 41 chr2 50618380 50618398 -202638185 + L3 LINE CR1 1091 1107 -470 1069 297 63 25 chr2 50618423 50618867 -202637716 - LTR16B LTR ERVL -3 461 1 248 314 96 75 chr2 50618946 50619280 -202637303 - L2 LINE L2 0 3272 2932 231 293 122 24 chr2 50619330 50619453 -202637130 + L3 LINE CR1 1335 1469 -108 315 257 54 11 chr2 50620156 50620264 -202636319 + MIR SINE MIR 52 166 -67 900 234 36 60 chr2 50620914 50621247 -202635336 - LTR16A LTR ERVL -125 325 1 214 268 28 56 chr2 50621353 50621424 -202635159 - MIR3 SINE MIR -26 182 114 739 64 18 9 chr2 50621553 50621663 -202634920 + (TTTC)n Simple_repeat Simple_repeat 1 111 0 688 266 120 42 chr2 50621665 50622090 -202634493 + MLT1J LTR MaLR 32 489 -22 380 322 38 49 chr2 50622225 50622408 -202634175 + MIR3 SINE MIR 28 208 0 21 57 0 0 chr2 50622923 50622958 -202633625 + AT_rich Low_complexity Low_complexity 1 35 0 2404 91 0 0 chr2 50623414 50623721 -202632862 + AluY SINE Alu 1 307 -4 193 317 17 0 chr2 50623835 50623895 -202632688 + MIR SINE MIR 33 93 -115 553 287 111 6 chr2 50624121 50624302 -202632281 - MIR3 SINE MIR -3 205 6 22 0 0 0 chr2 50625595 50625617 -202630966 + AT_rich Low_complexity Low_complexity 1 22 0 662 272 98 21 chr2 50625635 50625710 -202630873 - LTR40b LTR ERVL -2 460 392 399 41 0 0 chr2 50625710 50625759 -202630824 + (CA)n Simple_repeat Simple_repeat 1 49 0 662 272 98 21 chr2 50625759 50625970 -202630613 - LTR40b LTR ERVL -70 392 152 318 277 69 20 chr2 50626121 50626222 -202630361 - LTR40b LTR ERVL -277 185 80 536 214 1 13 chr2 50626963 50627070 -202629513 - MER5A DNA MER1_type -75 104 9 226 302 171 8 chr2 50627190 50627319 -202629264 - MIR SINE MIR -64 198 49 2247 109 0 0 chr2 50627706 50627999 -202628584 - AluSx SINE Alu -19 293 1 358 306 44 33 chr2 50628314 50628497 -202628086 - MER5A DNA MER1_type 0 189 5 341 336 9 9 chr2 50628568 50628684 -202627899 + MIR3 SINE MIR 85 200 -8 4542 93 18 0 chr2 50629325 50630034 -202626549 + L1PA14 LINE L1 5154 5877 -284 1161 102 102 5 chr2 50630051 50630238 -202626345 + L1PA14 LINE L1 5954 6158 -3 229 337 43 78 chr2 50630710 50630965 -202625618 - L2 LINE L2 0 3272 3027 895 200 196 20 chr2 50631001 50631251 -202625332 - MER33 DNA MER1_type 0 324 31 187 275 43 43 chr2 50632109 50632178 -202624405 - L2 LINE L2 -108 3164 3096 246 32 0 0 chr2 50632751 50632782 -202623801 + (TG)n Simple_repeat Simple_repeat 1 31 0 192 301 98 35 chr2 50633015 50633158 -202623425 - L2 LINE L2 -211 3061 2910 778 102 16 0 chr2 50634712 50634839 -202621744 + (TTCC)n Simple_repeat Simple_repeat 3 131 0 199 354 71 18 chr2 50635550 50635663 -202620920 - MIR SINE MIR -93 169 51 210 286 71 36 chr2 50637145 50637229 -202619354 + L2 LINE L2 3227 3313 0 577 215 18 0 chr2 50637888 50638051 -202618532 + (TCCA)n Simple_repeat Simple_repeat 4 169 0 1681 51 0 0 chr2 50638891 50639087 -202617496 + L1PA3 LINE L1 5958 6153 -2 526 339 39 0 chr2 50639682 50639862 -202616721 + MIR SINE MIR 12 198 -64 451 306 126 22 chr2 50639861 50640083 -202616500 - MIR SINE MIR 0 262 18 * 496 253 73 40 chr2 50640199 50640349 -202616234 + L2 LINE L2 3159 3313 0 442 248 147 23 chr2 50640359 50640488 -202616095 - L2 LINE L2 0 3272 3128 394 200 45 64 chr2 50640691 50640801 -202615782 - MER91C DNA MER1_type 0 140 33 1992 184 42 11 chr2 50641908 50642262 -202614321 + MLT1A1 LTR MaLR 1 365 0 792 249 117 37 chr2 50642525 50642705 -202613878 - MLT1J2 LTR MaLR -3 447 283 833 166 53 6 chr2 50642705 50642874 -202613709 - MER5B DNA MER1_type 0 178 2 792 249 117 37 chr2 50642874 50643056 -202613527 - MLT1J2 LTR MaLR -167 283 64 236 357 14 14 chr2 50643320 50643460 -202613123 + MIR SINE MIR 14 153 -109 330 293 72 50 chr2 50644601 50644782 -202611801 - MIR SINE MIR -16 246 62 2885 91 11 5 chr2 50645309 50645682 -202610901 - THE1C LTR MaLR 0 375 1 1317 138 0 5 chr2 50648393 50648588 -202607995 + AluSg/x SINE Alu 96 289 -23 283 293 27 0 chr2 50648606 50648681 -202607902 + MIR SINE MIR 74 150 -112 233 146 21 0 chr2 50648822 50648870 -202607713 + (CA)n Simple_repeat Simple_repeat 2 50 0 352 247 210 6 chr2 50650705 50650867 -202605716 - MIR SINE MIR -19 243 49 187 189 0 0 chr2 50651099 50651136 -202605447 + MIR SINE MIR 216 252 -10 984 197 40 27 chr2 50651858 50652081 -202604502 + MIR SINE MIR 37 262 0 183 342 25 13 chr2 50652581 50652660 -202603923 - L2 LINE L2 -93 3220 3141 2147 115 0 3 chr2 50652765 50653053 -202603530 + AluSq SINE Alu 1 287 -26 186 250 177 94 chr2 50653310 50653406 -202603177 + MIR SINE MIR 73 176 -86 275 229 57 0 chr2 50654014 50654084 -202602499 + MIR SINE MIR 81 154 -108 930 246 54 4 chr2 50654092 50654368 -202602215 - LTR37A LTR ERV1 -48 378 89 229 227 0 0 chr2 50654487 50654531 -202602052 + MIR SINE MIR 218 261 -1 22 35 0 0 chr2 50654538 50654567 -202602016 + AT_rich Low_complexity Low_complexity 1 29 0 1736 179 38 61 chr2 50654911 50655307 -202601276 - MLT1B LTR MaLR 0 390 4 2050 143 10 0 chr2 50655353 50655653 -202600930 + AluJb SINE Alu 1 303 -9 38 0 0 0 chr2 50656239 50656277 -202600306 + AT_rich Low_complexity Low_complexity 1 38 0 356 202 112 0 chr2 50656558 50656647 -202599936 + MIR3 SINE MIR 76 174 -34 290 229 71 0 chr2 50656647 50656717 -202599866 - MLT1J1 LTR MaLR 0 446 372 1831 259 108 58 chr2 50656768 50657650 -202598933 - L1ME2 LINE L1 -3 6161 5236 239 306 44 29 chr2 50660335 50660541 -202596042 - L1ME2 LINE L1 -3691 2455 2247 189 0 0 0 chr2 50661259 50661280 -202595303 + (TTG)n Simple_repeat Simple_repeat 1 21 0 7958 29 14 0 chr2 50661311 50662572 -202594011 - L1PA4 LINE L1 -2 6153 4884 2171 59 24 3 chr2 50662572 50662859 -202593724 + L1PA4 LINE L1 4599 4891 -1255 517 163 31 97 chr2 50662870 50663115 -202593468 - MER89 LTR ERV1 -232 327 1 335 314 43 29 chr2 50663116 50663256 -202593327 - HAL1b LINE L1 -1160 188 47 1076 187 55 142 chr2 50664106 50664508 -202592075 - MLT1A2 LTR MaLR -7 367 1 8284 213 32 35 chr2 50664508 50666247 -202590336 - MLT1A1-int LTR MaLR 0 1735 2 1593 221 14 33 chr2 50666248 50666610 -202589973 - MLT1A1 LTR MaLR 0 365 11 15705 43 6 0 chr2 50667005 50669573 -202587010 + L1PA5 LINE L1 3564 6145 -9 189 286 143 75 chr2 50671098 50671216 -202585367 + L2 LINE L2 2689 2798 -516 1848 152 35 0 chr2 50671216 50671506 -202585077 + AluSx SINE Alu 1 300 -12 189 286 143 75 chr2 50671506 50671639 -202584944 + L2 LINE L2 2798 2957 -357 299 389 6 51 chr2 50672740 50672897 -202583686 + L2 LINE L2 3123 3272 0 450 215 21 62 chr2 50673834 50673978 -202582605 - MIR3 SINE MIR -11 197 60 200 262 234 19 chr2 50674016 50674123 -202582460 + MER5A DNA MER1_type 36 165 -24 * 360 270 30 0 chr2 50674049 50674149 -202582434 - MER5A DNA MER1_type -77 112 10 817 204 155 66 chr2 50674529 50674891 -202581692 + LTR37A LTR ERV1 31 424 -2 233 338 0 0 chr2 50675039 50675113 -202581470 - MIR SINE MIR -69 139 66 2665 23 7 3 chr2 50675174 50675482 -202581101 - AluY SINE Alu -2 309 1 401 316 104 14 chr2 50675799 50676011 -202580572 + MIR SINE MIR 22 252 -10 217 336 45 27 chr2 50676101 50676211 -202580372 - L2 LINE L2 -18 3254 3143 2376 87 3 0 chr2 50677092 50677391 -202579192 - AluSx SINE Alu -12 300 1 253 259 37 12 chr2 50677698 50677779 -202578804 - MIR SINE MIR -48 214 132 2473 78 0 0 chr2 50678701 50679007 -202577576 + AluY SINE Alu 1 306 -5 1601 185 0 24 chr2 50679018 50679316 -202577267 - AluJo SINE Alu -15 297 7 327 275 83 18 chr2 50679816 50679925 -202576658 + MIR3 SINE MIR 92 207 -1 370 214 0 0 chr2 50681312 50681382 -202575201 + MER94 DNA DNA 62 131 -3 463 299 30 46 chr2 50681393 50681590 -202574993 + L2 LINE L2 2910 3103 -169 1790 91 24 0 chr2 50681597 50681849 -202574734 + L1MA2 LINE L1 6047 6304 0 231 114 0 0 chr2 50682044 50682079 -202574504 + (TCCC)n Simple_repeat Simple_repeat 2 36 0 856 197 41 83 chr2 50682957 50683175 -202573408 - MER63A DNA MER1_type 0 210 2 992 166 45 30 chr2 50683203 50683402 -202573181 - MER3 DNA MER1_type 0 209 8 929 250 18 44 chr2 50683541 50683769 -202572814 - MER58A DNA MER1_type -2 222 1 431 229 7 57 chr2 50683848 50683988 -202572595 - L1MC5 LINE L1 -22 7939 7807 619 260 34 23 chr2 50684520 50684697 -202571886 - MIR3 SINE MIR 0 208 30 628 262 214 15 chr2 50685285 50685756 -202570827 + L2 LINE L2 2694 3272 -41 2611 164 40 11 chr2 50686272 50686742 -202569841 - L1MC1 LINE L1 0 6333 5850 289 316 88 9 chr2 50687832 50687946 -202568637 + L2 LINE L2 3191 3313 0 368 309 14 14 chr2 50688524 50688663 -202567920 + L2 LINE L2 3171 3309 -4 2382 82 7 0 chr2 50688976 50689269 -202567314 + AluSc SINE Alu 1 295 -14 321 316 120 13 chr2 50690429 50690587 -202565996 + MIR3 SINE MIR 8 182 -26 1642 178 13 45 chr2 50691729 50692043 -202564540 - AluJo SINE Alu -8 304 1 329 301 59 46 chr2 50693174 50693327 -202563256 + L1MEd LINE L1 952 1106 -5013 304 304 67 42 chr2 50693358 50693666 -202562917 + HAL1b LINE L1 236 1630 -860 1900 98 0 42 chr2 50694098 50694363 -202562220 - AluSc SINE Alu -55 254 1 359 258 138 41 chr2 50694433 50694701 -202561882 - L1M4 LINE L1 -1537 4609 4316 2064 202 74 21 chr2 50694717 50695246 -202561337 - L1ME2 LINE L1 -7 6157 5601 799 248 85 10 chr2 50695243 50695537 -202561046 - L1ME2 LINE L1 -816 5330 5015 * 2175 130 10 0 chr2 50696474 50696782 -202559801 - AluSq SINE Alu 0 313 3 669 274 34 42 chr2 50697248 50697511 -202559072 + L2 LINE L2 3048 3308 -5 259 336 102 7 chr2 50697521 50697658 -202558925 + MIR SINE MIR 57 206 -56 3457 181 37 3 chr2 50697679 50698297 -202558286 + MER39 LTR ERV1 1 639 -68 200 374 96 0 chr2 50698716 50698903 -202557680 - L2 LINE L2 -217 3055 2851 222 402 43 0 chr2 50699006 50699170 -202557413 - L2 LINE L2 -2554 760 590 468 293 191 41 chr2 50699403 50699697 -202556886 - MER115 DNA AcHobo -327 366 29 342 308 59 44 chr2 50700348 50700528 -202556055 + MIR SINE MIR 19 200 -62 1437 239 129 20 chr2 50700918 50701374 -202555209 + L2 LINE L2 2808 3313 0 233 324 14 29 chr2 50701735 50701874 -202554709 + CT-rich Low_complexity Low_complexity 1 137 0 * 266 279 10 29 chr2 50701776 50701880 -202554703 + T-rich Low_complexity Low_complexity 4 105 0 443 253 165 16 chr2 50702358 50702540 -202554043 + MLT1L LTR MaLR 295 503 -112 1396 192 44 0 chr2 50704238 50704534 -202552049 - MER33 DNA MER1_type -22 302 1 333 315 128 20 chr2 50704949 50705152 -202551431 - MIR SINE MIR -21 241 17 1757 203 159 53 chr2 50705184 50705770 -202550813 - MLT2F LTR ERVL -7 656 9 189 0 0 0 chr2 50705800 50705821 -202550762 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 426 243 78 10 chr2 50705845 50705948 -202550635 + MIR SINE MIR 31 140 -122 449 321 184 0 chr2 50709541 50709753 -202546830 + MIR SINE MIR 4 254 -8 1907 163 0 10 chr2 50710646 50710947 -202545636 - AluJo SINE Alu -14 298 1 696 272 14 24 chr2 50712954 50713167 -202543416 + MIR SINE MIR 2 212 -50 1069 323 146 23 chr2 50713912 50714684 -202541899 + L2 LINE L2 1926 2792 -522 564 255 100 89 chr2 50714695 50715067 -202541516 + LTR33A LTR ERVL 1 414 -109 497 220 59 21 chr2 50715177 50715363 -202541220 - L1M4 LINE L1 -3532 2614 2422 1340 277 126 2 chr2 50715386 50715863 -202540720 + L2 LINE L2 2044 2579 -735 612 293 107 11 chr2 50716496 50716759 -202539824 + MLT1G LTR MaLR 1 288 -302 219 218 0 0 chr2 50716801 50716856 -202539727 + (CA)n Simple_repeat Simple_repeat 1 55 0 308 246 211 35 chr2 50716912 50717054 -202539529 + MLT1G LTR MaLR 429 595 0 206 203 81 14 chr2 50717439 50717513 -202539070 + L2 LINE L2 3165 3243 -70 962 157 21 38 chr2 50718606 50718919 -202537664 + MLT2B3 LTR ERVL 4 389 -165 911 196 56 0 chr2 50719027 50719206 -202537377 + MLT2B3 LTR ERVL 332 520 -34 9715 90 6 2 chr2 50719206 50720547 -202536036 - L1P LINE L1 -1665 4481 3136 1085 48 0 0 chr2 50720547 50720663 -202535920 + L1PA7 LINE L1 6030 6154 0 184 289 0 0 chr2 50720965 50721010 -202535573 + L2 LINE L2 3268 3312 -1 206 298 128 11 chr2 50721239 50721333 -202535250 + L2 LINE L2 3206 3310 -3 565 239 26 0 chr2 50722594 50722711 -202533872 + MER5A DNA MER1_type 1 120 -69 1577 170 15 0 chr2 50722711 50722970 -202533613 + AluJo SINE Alu 1 263 -49 652 256 181 30 chr2 50723083 50723353 -202533230 + LTR16A LTR ERVL 113 423 -27 234 0 0 0 chr2 50723354 50723380 -202533203 + (TG)n Simple_repeat Simple_repeat 1 26 0 445 320 27 13 chr2 50724242 50724392 -202532191 + MIR3 SINE MIR 2 153 -55 194 220 54 119 chr2 50724718 50724886 -202531697 + L2 LINE L2 3085 3241 -72 245 323 21 0 chr2 50724953 50725049 -202531534 - MIR SINE MIR -74 188 91 23 0 0 0 chr2 50725238 50725261 -202531322 + AT_rich Low_complexity Low_complexity 1 23 0 196 329 29 0 chr2 50725607 50725677 -202530906 - MER5A DNA MER1_type -92 97 26 578 305 73 9 chr2 50726033 50726266 -202530317 + MIR SINE MIR 13 260 -2 1021 178 81 19 chr2 50727975 50728233 -202528350 - MER58D DNA MER1_type 0 386 113 225 94 0 0 chr2 50728653 50728685 -202527898 + (ATG)n Simple_repeat Simple_repeat 3 34 0 1890 154 50 31 chr2 50729208 50729246 -202527337 - L1PA15 LINE L1 -5 6160 6124 2964 6 0 0 chr2 50729246 50729561 -202527022 - AluYb8 SINE Alu -3 315 1 1890 154 50 31 chr2 50729561 50729880 -202526703 - L1PA15 LINE L1 -41 6124 5796 21 36 0 0 chr2 50730478 50730506 -202526077 + AT_rich Low_complexity Low_complexity 1 28 0 1984 134 3 26 chr2 50730741 50731054 -202525529 - AluY SINE Alu -1 310 5 21 0 0 0 chr2 50731059 50731080 -202525503 + AT_rich Low_complexity Low_complexity 1 21 0 213 330 110 0 chr2 50731090 50731190 -202525393 + L2 LINE L2 2925 3035 -237 306 0 0 0 chr2 50731386 50731420 -202525163 + (CA)n Simple_repeat Simple_repeat 2 35 0 1890 156 7 7 chr2 50732822 50733129 -202523454 - AluJb SINE Alu -5 307 1 230 234 0 0 chr2 50734616 50734663 -202521920 + MLT1K LTR MaLR 213 259 -329 879 276 12 12 chr2 50735734 50735984 -202520599 - L1ME1 LINE L1 -18 6148 5899 * 1414 152 49 23 chr2 50735983 50736246 -202520337 - L1M1 LINE L1 -7279 286 17 321 155 17 0 chr2 50736246 50736304 -202520279 - L1ME1 LINE L1 -244 5922 5864 968 328 150 30 chr2 50736306 50737664 -202518919 + L2 LINE L2 1745 3258 -14 1379 206 33 20 chr2 50739856 50740434 -202516149 + MER82 DNA MER2_type 1 653 0 264 286 86 9 chr2 50740656 50740761 -202515822 + MIR SINE MIR 32 144 -64 347 337 43 25 chr2 50741037 50741200 -202515383 + MIR SINE MIR 5 170 -92 1770 219 137 74 chr2 50741606 50742547 -202514036 + Charlie7 DNA MER1_type 1541 2540 -72 643 311 29 0 chr2 50742736 50742945 -202513638 - MIR SINE MIR 0 262 48 299 295 109 38 chr2 50742989 50743172 -202513411 + L3 LINE CR1 1369 1564 -13 587 224 26 19 chr2 50743237 50743393 -202513190 + MER103 DNA DNA 7 163 -3 352 291 27 18 chr2 50744561 50744671 -202511912 - MIR SINE MIR -64 198 88 734 248 56 35 chr2 50744719 50744917 -202511666 - MIR SINE MIR -26 236 35 237 300 100 39 chr2 50745423 50745553 -202511030 + MIR SINE MIR 110 247 -15 254 309 40 16 chr2 50745603 50745729 -202510854 + MIR SINE MIR 84 212 -50 191 237 137 92 chr2 50745872 50745939 -202510644 - MIR SINE MIR -79 183 121 2436 128 16 19 chr2 50745939 50746315 -202510268 - THE1C LTR MaLR 0 375 1 191 237 137 92 chr2 50746315 50746378 -202510205 - MIR SINE MIR -141 121 47 202 297 72 54 chr2 50746827 50746938 -202509645 - L2 LINE L2 -17 3255 3143 242 291 38 38 chr2 50748140 50748219 -202508364 - MIR SINE MIR -79 183 105 194 252 168 77 chr2 50749292 50749337 -202507246 + L2 LINE L2 2584 2624 -690 3576 96 11 2 chr2 50749337 50749786 -202506797 + MLT2A2 LTR ERVL 1 453 0 194 252 168 77 chr2 50749786 50749883 -202506700 + L2 LINE L2 2624 2739 -575 186 235 84 34 chr2 50750343 50750462 -202506121 + L2 LINE L2 3025 3149 -164 312 229 0 29 chr2 50750478 50750548 -202506035 - L2 LINE L2 -79 3234 3167 209 211 0 0 chr2 50751280 50751318 -202505265 + (CAT)n Simple_repeat Simple_repeat 1 38 0 440 242 77 77 chr2 50751325 50751519 -202505064 - MIR SINE MIR -10 252 59 24760 34 1 1 chr2 50751576 50755163 -202501420 - L1PA2 LINE L1 -1 6154 2566 207 336 147 9 chr2 50755186 50755302 -202501281 - MIR SINE MIR -87 175 44 761 219 21 43 chr2 50756419 50756606 -202499977 + MLT1A2 LTR MaLR 1 183 -191 269 135 19 0 chr2 50756613 50756665 -202499918 + CT-rich Low_complexity Low_complexity 2 54 0 823 189 118 23 chr2 50756666 50756867 -202499716 + MLT1A2 LTR MaLR 190 369 -5 639 87 0 0 chr2 50757000 50757104 -202499479 + (TA)n Simple_repeat Simple_repeat 2 105 0 1558 211 12 98 chr2 50757306 50757713 -202498870 + MLT1A2 LTR MaLR 1 372 -2 189 350 107 0 chr2 50758663 50758766 -202497817 - MIR SINE MIR -119 143 30 296 375 19 10 chr2 50759065 50759169 -202497414 - MIR3 SINE MIR -95 113 9 758 184 81 75 chr2 50759626 50759800 -202496783 - MER45A DNA AcHobo 0 178 4 1438 255 99 30 chr2 50760120 50760595 -202495988 + MLT1H LTR MaLR 18 525 -24 268 297 212 0 chr2 50760639 50760757 -202495826 - MIR SINE MIR -109 153 11 338 105 0 18 chr2 50761510 50761567 -202495016 + (TCCA)n Simple_repeat Simple_repeat 3 58 0 257 296 22 30 chr2 50761833 50761968 -202494615 + GA-rich Low_complexity Low_complexity 3 136 0 195 129 0 0 chr2 50762678 50762709 -202493874 + (CA)n Simple_repeat Simple_repeat 1 31 0 282 180 33 33 chr2 50762852 50762913 -202493670 + MIR SINE MIR 86 146 -116 558 204 30 23 chr2 50763012 50763144 -202493439 - MER103 DNA DNA -33 133 1 298 116 0 0 chr2 50763222 50763265 -202493318 + MIR3 SINE MIR 163 205 -3 490 290 27 16 chr2 50763407 50763593 -202492990 - MIR SINE MIR -28 234 47 876 221 28 51 chr2 50764352 50764569 -202492014 - MER58A DNA MER1_type 0 224 13 2392 53 21 0 chr2 50764688 50764970 -202491613 + L1PA10 LINE L1 5881 6168 0 301 284 14 0 chr2 50766211 50766285 -202490298 + MIR3 SINE MIR 107 181 -27 389 277 200 0 chr2 50766375 50766505 -202490078 - MER5A DNA MER1_type 0 189 34 271 341 22 11 chr2 50766777 50766868 -202489715 + L2 LINE L2 3222 3313 0 200 306 12 35 chr2 50767238 50767323 -202489260 + L3 LINE CR1 1494 1576 -1 580 48 0 36 chr2 50767709 50767793 -202488790 + L1PA8 LINE L1 6091 6171 -1 1620 149 24 0 chr2 50767797 50768045 -202488538 + AluSx SINE Alu 1 254 -58 200 250 294 49 chr2 50768364 50768548 -202488035 + L2 LINE L2 3044 3272 0 259 338 0 0 chr2 50768730 50768810 -202487773 - L2 LINE L2 -9 3304 3225 21 57 0 0 chr2 50769030 50769065 -202487518 + AT_rich Low_complexity Low_complexity 1 35 0 703 212 65 6 chr2 50769854 50770024 -202486559 - MIR SINE MIR -1 261 82 2130 141 0 0 chr2 50771072 50771377 -202485206 + AluSx SINE Alu 1 305 -7 271 320 0 0 chr2 50771737 50771812 -202484771 - MIR SINE MIR -1 261 187 442 281 123 14 chr2 50771880 50772026 -202484557 + MIR SINE MIR 23 184 -78 718 259 54 37 chr2 50772047 50772344 -202484239 + MLT1J1 LTR MaLR 3 304 -142 199 240 60 0 chr2 50773017 50773067 -202483516 + MIR SINE MIR 91 143 -65 732 253 12 6 chr2 50773226 50773392 -202483191 + MIR3 SINE MIR 36 202 -6 396 0 0 0 chr2 50773776 50773820 -202482763 + (TG)n Simple_repeat Simple_repeat 2 45 0 563 240 71 22 chr2 50775227 50775410 -202481173 + MIR SINE MIR 71 262 0 237 235 0 20 chr2 50775487 50775538 -202481045 + L2 LINE L2 3223 3272 0 187 324 74 78 chr2 50775642 50775886 -202480697 + L2 LINE L2 3007 3249 -23 366 331 0 48 chr2 50776156 50776301 -202480282 - MIR SINE MIR -68 140 2 198 314 84 42 chr2 50777933 50778102 -202478481 + MIR SINE MIR 15 189 -73 275 292 150 35 chr2 50779131 50779244 -202477339 - MIR3 SINE MIR 0 208 83 364 243 20 7 chr2 50779895 50780043 -202476540 + (TA)n Simple_repeat Simple_repeat 1 150 0 22 56 0 0 chr2 50780386 50780422 -202476161 + AT_rich Low_complexity Low_complexity 1 36 0 449 312 58 10 chr2 50781133 50781444 -202475139 + L1MEd LINE L1 927 1252 -4867 426 304 135 35 chr2 50781474 50781786 -202474797 + L1MEd LINE L1 1353 1695 -4615 2302 45 3 17 chr2 50781845 50782178 -202474405 + AluY SINE Alu 1 329 0 275 279 57 32 chr2 50783320 50783478 -202473105 + L1ME4a LINE L1 5957 6118 -3 440 188 73 137 chr2 50783844 50784078 -202472505 + L2 LINE L2 3094 3312 -1 1183 221 16 4 chr2 50785368 50785612 -202470971 + AluJb SINE Alu 1 247 -65 340 254 203 14 chr2 50788761 50788899 -202467684 + MER5A DNA MER1_type 17 180 -9 346 260 58 59 chr2 50789494 50789688 -202466895 + MIR SINE MIR 19 216 -46 713 294 89 4 chr2 50789862 50790097 -202466486 + MIR SINE MIR 8 262 0 198 296 84 0 chr2 50790117 50790188 -202466395 + L2 LINE L2 3156 3232 -40 504 123 13 148 chr2 50791299 50791394 -202465189 + L1MA9 LINE L1 6177 6245 -67 1894 142 3 24 chr2 50791394 50791689 -202464894 - AluSq SINE Alu -24 289 1 504 123 13 148 chr2 50791689 50791748 -202464835 + L1MA9 LINE L1 6245 6310 -2 234 0 0 0 chr2 50793328 50793354 -202463229 + (TA)n Simple_repeat Simple_repeat 2 27 0 197 254 56 42 chr2 50793566 50793637 -202462946 - L2 LINE L2 -790 2524 2453 1709 186 33 78 chr2 50793680 50793727 -202462856 + MLT1C LTR MaLR 1 49 -418 2195 116 41 36 chr2 50793727 50794089 -202462494 + THE1B LTR MaLR 1 364 0 1709 186 33 78 chr2 50794089 50794530 -202462053 + MLT1C LTR MaLR 49 467 0 2169 300 110 7 chr2 50794819 50795645 -202460938 - L2 LINE L2 -345 2969 2059 5529 108 18 5 chr2 50795650 50796492 -202460091 + L1P3 LINE L1 517 1369 -5092 263 266 46 18 chr2 50796622 50796731 -202459852 + L2 LINE L2 3114 3225 -88 292 292 73 45 chr2 50796836 50797329 -202459254 - L1M4 LINE L1 -3529 2617 2111 23 0 0 0 chr2 50797468 50797491 -202459092 + AT_rich Low_complexity Low_complexity 1 23 0 26 64 0 0 chr2 50797542 50797589 -202458994 + AT_rich Low_complexity Low_complexity 1 47 0 394 337 70 21 chr2 50797653 50797840 -202458743 + L2 LINE L2 3100 3295 -18 22 35 0 0 chr2 50798520 50798549 -202458034 + AT_rich Low_complexity Low_complexity 1 29 0 14452 33 2 0 chr2 50799362 50801210 -202455373 + L1PA4 LINE L1 2301 4152 -1994 434 0 0 0 chr2 50801208 50801260 -202455323 - L1P LINE L1 -3399 2747 2696 * 4915 25 2 0 chr2 50801260 50801824 -202454759 + L1PA4 LINE L1 5578 6150 -5 468 308 30 8 chr2 50801901 50802135 -202454448 + Charlie8 DNA MER1_type 33 271 -2146 341 297 69 51 chr2 50802221 50802330 -202454253 - MER5B DNA MER1_type 0 178 63 1718 157 29 10 chr2 50802330 50802636 -202453947 - AluSq SINE Alu -1 312 1 341 297 69 51 chr2 50802636 50802701 -202453882 - MER5B DNA MER1_type -115 63 1 252 0 0 0 chr2 50802773 50802801 -202453782 + (T)n Simple_repeat Simple_repeat 1 28 0 442 266 77 7 chr2 50803121 50803264 -202453319 - L2 LINE L2 0 3313 3161 214 344 0 0 chr2 50804990 50805054 -202451529 - L2 LINE L2 -5 3267 3204 333 369 8 16 chr2 50805709 50805831 -202450752 + MIR SINE MIR 18 138 -70 514 211 297 0 chr2 50805861 50806070 -202450513 + L1MD3 LINE L1 7004 7274 -721 361 250 46 0 chr2 50806076 50806184 -202450399 + MLT1F1 LTR MaLR 3 115 -452 1342 193 59 39 chr2 50806190 50806527 -202450056 + L1MD3 LINE L1 7406 7749 -246 27977 93 14 3 chr2 50806627 50811668 -202444915 + L1PA7 LINE L1 1077 6151 -3 530 285 80 39 chr2 50811677 50812151 -202444432 + L1ME3A LINE L1 5158 5681 -489 1147 175 51 35 chr2 50812151 50812466 -202444117 - MER33 DNA MER1_type 0 324 5 530 285 80 39 chr2 50812466 50812761 -202443822 + L1ME3A LINE L1 5681 5962 -208 532 261 14 95 chr2 50813157 50813235 -202443348 - MIR SINE MIR -23 239 156 1975 192 102 17 chr2 50813235 50813704 -202442879 - LTR22 LTR ERVK 0 509 1 532 261 14 95 chr2 50813704 50813859 -202442724 - MIR SINE MIR -106 156 27 639 246 0 0 chr2 50814081 50814207 -202442376 - FLAM_A SINE Alu -7 126 1 1878 164 0 25 chr2 50814227 50814544 -202442039 + AluJb SINE Alu 1 309 -3 346 280 24 24 chr2 50814628 50814753 -202441830 - MIR SINE MIR -109 153 29 575 290 15 67 chr2 50816367 50816636 -202439947 - MIR SINE MIR -1 261 7 253 341 59 0 chr2 50819232 50819317 -202437266 - L2 LINE L2 -37 3235 3146 268 309 149 5 chr2 50820279 50820467 -202436116 + L2 LINE L2 1872 2086 -1228 234 365 66 29 chr2 50820564 50820808 -202435775 + L2 LINE L2 2608 2860 -454 2100 130 22 33 chr2 50820932 50821300 -202435283 - THE1B LTR MaLR 0 364 1 8315 166 90 5 chr2 50821300 50822744 -202433839 - THE1B-int LTR MaLR 0 1580 1 963 262 77 51 chr2 50822924 50823495 -202433088 - MLT2E LTR ERVL -10 618 1 326 307 63 8 chr2 50823501 50823628 -202432955 + L2 LINE L2 3138 3271 -1 1729 164 30 27 chr2 50824186 50824484 -202432099 + AluJb SINE Alu 1 299 -13 235 254 28 0 chr2 50825530 50825601 -202430982 + CT-rich Low_complexity Low_complexity 3 75 0 393 169 34 45 chr2 50826056 50826145 -202430438 - MER94 DNA DNA -33 101 14 640 306 43 10 chr2 50826474 50826715 -202429868 + MIR SINE MIR 3 249 -13 277 327 89 18 chr2 50828505 50828668 -202427915 - MIR SINE MIR -58 150 16 273 263 28 30 chr2 50828781 50828890 -202427693 + MER91B DNA MER1_type 4 109 -31 588 238 25 64 chr2 50829665 50829867 -202426716 + MLT1H LTR MaLR 1 194 -355 465 285 64 0 chr2 50829938 50830121 -202426462 + MLT1H LTR MaLR 342 544 -5 207 204 0 0 chr2 50830344 50830398 -202426185 + (TG)n Simple_repeat Simple_repeat 1 54 0 906 294 90 37 chr2 50830415 50831781 -202424802 - L1MEc LINE L1 -2659 3556 2120 308 236 21 118 chr2 50832198 50832255 -202424328 - L3 LINE CR1 -283 1294 1233 661 281 35 10 chr2 50832255 50832454 -202424129 + MER63A DNA MER1_type 5 208 -2 308 236 21 118 chr2 50832454 50832540 -202424043 - L3 LINE CR1 -344 1233 1165 2139 48 7 26 chr2 50833782 50834103 -202422480 + AluY SINE Alu 17 332 0 311 274 64 32 chr2 50835245 50835402 -202421181 + L1ME4a LINE L1 5957 6118 -3 441 188 73 137 chr2 50835770 50836004 -202420579 + L2 LINE L2 3094 3312 -1 1162 221 16 4 chr2 50837294 50837538 -202419045 + AluJb SINE Alu 1 247 -65 335 254 203 14 chr2 50840686 50840824 -202415759 + MER5A DNA MER1_type 17 180 -9 323 266 59 59 chr2 50841419 50841613 -202414970 + MIR SINE MIR 19 216 -46 716 294 89 4 chr2 50841787 50842022 -202414561 + MIR SINE MIR 8 262 0 195 296 84 0 chr2 50842042 50842113 -202414470 + L2 LINE L2 3156 3232 -40 543 116 13 148 chr2 50843224 50843319 -202413264 + L1MA9 LINE L1 6177 6245 -67 1907 139 3 24 chr2 50843319 50843614 -202412969 - AluSq SINE Alu -24 289 1 543 116 13 148 chr2 50843614 50843673 -202412910 + L1MA9 LINE L1 6245 6310 -2 225 0 0 0 chr2 50845253 50845278 -202411305 + (TA)n Simple_repeat Simple_repeat 2 26 0 219 383 9 9 chr2 50846000 50846107 -202410476 + MIR SINE MIR 36 142 -120 2895 201 80 41 chr2 50846240 50847394 -202409189 - L1ME1 LINE L1 -89 6077 4878 447 245 68 0 chr2 50847401 50847564 -202409019 + L1M4 LINE L1 3587 3760 -2386 474 337 0 21 chr2 50847583 50847773 -202408810 + L2 LINE L2 2698 2883 -431 611 278 6 22 chr2 50847850 50848030 -202408553 + MER5B DNA MER1_type 1 177 -1 220 317 37 0 chr2 50849330 50849412 -202407171 - MIR SINE MIR -87 175 91 324 350 25 0 chr2 50849519 50849639 -202406944 + MIR SINE MIR 66 188 -74 6910 208 21 29 chr2 50849652 50851875 -202404708 + L1M2 LINE L1 883 3083 -3705 342 0 0 0 chr2 50851879 50851917 -202404666 + (TA)n Simple_repeat Simple_repeat 2 39 0 228 280 11 21 chr2 50852172 50852265 -202404318 + CT-rich Low_complexity Low_complexity 3 94 0 252 0 0 0 chr2 50852541 50852569 -202404014 + (TA)n Simple_repeat Simple_repeat 2 29 0 11870 187 34 35 chr2 50852569 50854348 -202402235 + L1M2 LINE L1 3101 4880 -2059 2069 100 7 4 chr2 50854348 50854628 -202401955 + AluSc SINE Alu 1 281 -28 11870 187 34 35 chr2 50854628 50855010 -202401573 + L1M2 LINE L1 4880 5261 -1678 1398 189 49 25 chr2 50855010 50855296 -202401287 + AluJo SINE Alu 3 295 -7 11870 187 34 35 chr2 50855296 50855672 -202400911 + L1M2 LINE L1 5261 5636 -1303 525 123 0 12 chr2 50855672 50855753 -202400830 - MADE1 DNA Mariner 0 80 1 11870 187 34 35 chr2 50855753 50856433 -202400150 + L1M2 LINE L1 5636 6309 -630 253 217 0 0 chr2 50856442 50856488 -202400095 + L1MA5 LINE L1 712 757 -6411 4533 217 20 2 chr2 50856488 50857364 -202399219 + L1MA5 LINE L1 684 1575 -5593 943 207 12 24 chr2 50857354 50857605 -202398978 + L1MA5 LINE L1 3228 3475 -3692 * 304 321 0 18 chr2 50857610 50857722 -202398861 - L1MC4 LINE L1 -1340 6702 6593 474 169 6 22 chr2 50857755 50857938 -202398645 + (TA)n Simple_repeat Simple_repeat 1 180 0 1068 239 0 12 chr2 50857950 50858193 -202398390 + L1MA5 LINE L1 3468 3707 -3460 3237 166 23 34 chr2 50858197 50859186 -202397397 + L1MA5 LINE L1 5704 6683 -638 3129 161 12 46 chr2 50859404 50860051 -202396532 + L1MA5 LINE L1 6688 7312 -9 225 0 0 0 chr2 50860145 50860170 -202396413 + (TG)n Simple_repeat Simple_repeat 2 26 0 1143 201 98 77 chr2 50860322 50860710 -202395873 + MSTD LTR MaLR 1 396 0 197 323 158 8 chr2 50860932 50861059 -202395524 - L2 LINE L2 -210 3062 2917 681 317 94 64 chr2 50861363 50862303 -202394280 - L2 LINE L2 -650 2664 1697 347 354 18 0 chr2 50863201 50863314 -202393269 - MIR SINE MIR -59 149 35 498 338 56 7 chr2 50864452 50864698 -202391885 - MIR SINE MIR -3 259 1 940 305 39 41 chr2 50864703 50865139 -202391444 + L2 LINE L2 1326 1760 -1554 1343 250 68 60 chr2 50865161 50865744 -202390839 + L2 LINE L2 2733 3313 0 618 265 29 0 chr2 50866849 50867019 -202389564 + L1MEd LINE L1 3 177 -5942 393 282 17 46 chr2 50867150 50867324 -202389259 + L1MEd LINE L1 1085 1253 -4866 292 235 39 10 chr2 50867439 50867541 -202389042 + HAL1 LINE L1 1528 1632 -875 1979 194 55 0 chr2 50867691 50868088 -202388495 - MSTB1 LTR MaLR 0 432 14 461 263 16 49 chr2 50868336 50868579 -202388004 + L1MEd LINE L1 2848 3082 -3047 5996 150 34 27 chr2 50869211 50871413 -202385170 + L1MA5A LINE L1 4059 6295 -2 365 257 87 73 chr2 50871466 50871672 -202384911 + L1MEd LINE L1 3093 3301 -2828 1604 184 7 40 chr2 50871716 50872015 -202384568 - AluJb SINE Alu -15 297 9 232 287 39 35 chr2 50872026 50872256 -202384327 + L1MEd LINE L1 3352 3582 -2547 2193 116 56 31 chr2 50872264 50872619 -202383964 - THE1B LTR MaLR 0 364 1 10391 105 33 12 chr2 50872619 50874167 -202382416 - THE1B-int LTR MaLR 0 1580 1 1925 110 7 23 chr2 50874167 50874466 -202382117 - THE1B LTR MaLR 0 364 71 442 305 86 7 chr2 50874693 50874972 -202381611 + L1MEd LINE L1 3845 4145 -1984 2977 204 20 39 chr2 50875263 50876217 -202380366 + L1MB7 LINE L1 2006 2940 -3848 667 273 93 65 chr2 50876472 50877925 -202378658 + L1MEd LINE L1 4453 5945 -208 2582 184 23 37 chr2 50877926 50878492 -202378091 + MER74A LTR ERVL 1 558 0 760 51 0 0 chr2 50879271 50879369 -202377214 + L1P LINE L1 1 98 -6048 * 8912 46 107 0 chr2 50879363 50880639 -202375944 + L1P LINE L1 617 2028 -4118 185 374 66 0 chr2 50880740 50880831 -202375752 - L2 LINE L2 -69 3203 3107 581 282 51 23 chr2 50880855 50881071 -202375512 - MIR SINE MIR -17 245 24 184 183 67 67 chr2 50881549 50881609 -202374974 + L3 LINE CR1 913 972 -605 189 0 0 0 chr2 50881997 50882018 -202374565 + (TATAA)n Simple_repeat Simple_repeat 3 23 0 187 226 60 60 chr2 50882894 50882978 -202373605 - MIR SINE MIR -6 256 173 336 48 0 0 chr2 50883028 50883070 -202373513 + (TG)n Simple_repeat Simple_repeat 2 43 0 3930 242 55 38 chr2 50883072 50884226 -202372357 - L1ME1 LINE L1 -56 6370 5236 1812 164 25 0 chr2 50884226 50884506 -202372077 - AluJb SINE Alu -25 287 1 3930 242 55 38 chr2 50884506 50885564 -202371019 - L1ME1 LINE L1 -1190 5236 4108 2211 122 3 0 chr2 50885564 50885875 -202370708 - AluSx SINE Alu 0 312 1 3930 242 55 38 chr2 50885875 50886109 -202370474 - L1ME1 LINE L1 -2318 4108 3879 1164 246 84 35 chr2 50886103 50886499 -202370084 - L1ME1 LINE L1 -3496 2910 2535 * 2205 121 0 7 chr2 50886499 50886806 -202369777 - AluSx SINE Alu -7 305 1 1164 246 84 35 chr2 50886806 50887530 -202369053 - L1ME1 LINE L1 -3871 2535 1700 908 235 102 23 chr2 50887529 50887972 -202368611 + L1MB7 LINE L1 3577 4054 -2734 * 4004 199 26 7 chr2 50887974 50889536 -202367047 + L1MB7 LINE L1 5223 6810 -16 436 278 53 29 chr2 50889563 50889590 -202366993 - L1ME1 LINE L1 -4700 1706 1681 2586 145 31 14 chr2 50889590 50890011 -202366572 + MSTA LTR MaLR 1 428 0 436 278 53 29 chr2 50890011 50890228 -202366355 - L1ME1 LINE L1 -4725 1681 1456 323 238 19 9 chr2 50890237 50890342 -202366241 - L1ME1 LINE L1 -5114 1295 1190 21 36 0 0 chr2 50890852 50890880 -202365703 + AT_rich Low_complexity Low_complexity 1 28 0 362 161 54 54 chr2 50890997 50891127 -202365456 - MER53 DNA DNA -56 133 4 195 370 55 14 chr2 50891144 50891217 -202365366 - L2 LINE L2 -81 3191 3116 389 157 65 4 chr2 50891583 50891834 -202364749 + (TA)n Simple_repeat Simple_repeat 1 266 0 364 302 50 36 chr2 50892306 50892528 -202364055 + MLT1J LTR MaLR 287 511 0 613 344 93 13 chr2 50892530 50893131 -202363452 - L2 LINE L2 -1138 2176 1528 276 75 0 0 chr2 50893357 50893397 -202363186 - MSTC LTR MaLR -1 427 388 1314 156 28 45 chr2 50893470 50893792 -202362791 - MSTC LTR MaLR -49 379 1 300 310 13 0 chr2 50896804 50896910 -202359673 + MIR SINE MIR 56 165 -43 285 128 0 0 chr2 50897205 50897252 -202359331 + (GA)n Simple_repeat Simple_repeat 1 47 0 200 365 168 15 chr2 50897869 50898143 -202358440 + L2 LINE L2 2662 2977 -337 444 345 33 21 chr2 50898499 50898744 -202357839 - MIR SINE MIR -2 260 15 1816 214 94 5 chr2 50898841 50899286 -202357297 + MLT2B1 LTR ERVL 36 520 0 195 321 56 60 chr2 50899862 50900130 -202356453 - L2 LINE L2 -412 2902 2636 662 313 92 4 chr2 50900773 50901013 -202355570 - MIR SINE MIR -1 261 1 192 397 66 8 chr2 50901184 50901305 -202355278 + L2 LINE L2 3133 3260 -12 250 250 12 25 chr2 50901507 50901587 -202354996 + MLT1J2 LTR MaLR 372 450 0 364 270 40 72 chr2 50902482 50902676 -202353907 - MIR SINE MIR -25 237 52 472 201 31 72 chr2 50902972 50903166 -202353417 + L1MC5 LINE L1 7725 7910 -51 185 330 106 0 chr2 50903193 50903287 -202353296 + L3 LINE CR1 1417 1520 -57 326 365 25 13 chr2 50905140 50905299 -202351284 + MIR SINE MIR 61 221 -41 288 229 16 0 chr2 50905973 50906034 -202350549 - L2 LINE L2 -6 3307 3246 229 270 40 40 chr2 50906214 50906288 -202350295 - MIR SINE MIR -188 74 1 289 390 44 22 chr2 50906684 50906912 -202349671 - L2 LINE L2 -373 2941 2709 639 222 7 46 chr2 50907091 50907244 -202349339 + MIR SINE MIR 110 256 -6 354 208 151 19 chr2 50907349 50907455 -202349128 - L1MA6 LINE L1 0 6300 6181 2963 140 21 4 chr2 50909208 50909694 -202346889 + MER41E LTR ERV1 1 494 -18 248 0 31 0 chr2 50910007 50910039 -202346544 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 582 288 45 0 chr2 50910395 50910593 -202345990 + MIR SINE MIR 35 241 -21 2001 148 0 3 chr2 50910618 50910923 -202345660 + AluSx SINE Alu 1 304 -8 360 238 65 53 chr2 50911216 50911344 -202345239 + MIR SINE MIR 16 146 -62 237 122 61 20 chr2 50911749 50911798 -202344785 - MIR SINE MIR -12 250 200 310 361 146 5 chr2 50911809 50912014 -202344569 + MIR SINE MIR 28 261 -1 354 286 48 19 chr2 50913396 50913501 -202343082 + MIR SINE MIR 41 148 -60 210 254 0 0 chr2 50913581 50913648 -202342935 + CT-rich Low_complexity Low_complexity 1 67 0 894 147 5 76 chr2 50913763 50913816 -202342767 + L1MA6 LINE L1 6105 6160 -140 1790 142 50 14 chr2 50913816 50914098 -202342485 + AluJb SINE Alu 1 292 -20 894 147 5 76 chr2 50914098 50914255 -202342328 + L1MA6 LINE L1 6160 6300 0 2173 96 0 42 chr2 50914579 50914892 -202341691 - AluSg1 SINE Alu -9 300 1 1180 288 73 53 chr2 50915079 50915814 -202340769 + L2 LINE L2 2358 3124 -189 1485 131 36 0 chr2 50915814 50916035 -202340548 + MER30 DNA MER1_type 2 230 0 1180 288 73 53 chr2 50916035 50916229 -202340354 + L2 LINE L2 3124 3313 0 1654 188 31 99 chr2 50916716 50917141 -202339442 - MSTD LTR MaLR 0 396 1 404 335 32 13 chr2 50917246 50917404 -202339179 - MIR3 SINE MIR -28 180 20 2292 120 0 0 chr2 50917646 50917954 -202338629 + AluSx SINE Alu 4 311 -1 252 0 0 0 chr2 50918117 50918145 -202338438 + (CA)n Simple_repeat Simple_repeat 2 29 0 1407 23 0 6 chr2 50918336 50918507 -202338076 + (TTC)n Simple_repeat Simple_repeat 2 180 0 1867 129 44 0 chr2 50918507 50918778 -202337805 - AluSx SINE Alu -1 453 1 252 404 58 21 chr2 50919362 50919550 -202337033 + L3 LINE CR1 46 240 -1337 302 284 99 62 chr2 50919654 50919865 -202336718 + L2 LINE L2 2305 2523 -791 635 254 108 5 chr2 50920676 50920861 -202335722 + MIR SINE MIR 43 246 -16 192 309 15 0 chr2 50920902 50920970 -202335613 + MIR SINE MIR 56 124 -138 210 171 0 0 chr2 50921089 50921130 -202335453 + (CAATT)n Simple_repeat Simple_repeat 2 42 0 1447 288 52 53 chr2 50923398 50923977 -202332606 + L1MB7 LINE L1 8 585 -6274 7152 55 5 0 chr2 50923986 50925650 -202330933 + L1PA3 LINE L1 4459 6128 -27 3748 230 46 13 chr2 50925656 50926210 -202330373 + L1MB7 LINE L1 3388 3923 -3072 2094 152 55 24 chr2 50926210 50926630 -202329953 - Tigger2a DNA MER2_type -1 433 1 3748 230 46 13 chr2 50926630 50929464 -202327119 + L1MB7 LINE L1 3923 6990 -5 216 333 21 32 chr2 50929627 50929720 -202326863 + MIR SINE MIR 71 162 -100 354 156 73 62 chr2 50929985 50930081 -202326502 + MER103 DNA DNA 68 164 -2 2347 84 0 3 chr2 50930197 50930496 -202326087 - AluY SINE Alu -13 298 1 2279 167 14 41 chr2 50930704 50931141 -202325442 + MSTB LTR MaLR 1 425 -1 1320 109 0 22 chr2 50931141 50931325 -202325258 + AluSg/x SINE Alu 126 305 -7 2103 162 72 8 chr2 50931839 50932240 -202324343 - MSTA LTR MaLR 0 428 2 331 294 188 6 chr2 50932483 50932653 -202323930 + MIR SINE MIR 57 257 -5 221 228 0 35 chr2 50932699 50932756 -202323827 - L2 LINE L2 0 3313 3259 219 289 92 33 chr2 50932865 50933017 -202323566 - L2 LINE L2 -280 3033 2873 426 271 19 0 chr2 50933062 50933169 -202323414 + L2 LINE L2 3201 3309 -4 1041 305 133 34 chr2 50933205 50933937 -202322646 - L2 LINE L2 -605 2709 1906 190 185 49 86 chr2 50934020 50934101 -202322482 - L2 LINE L2 -1414 1900 1823 463 192 108 59 chr2 50934101 50934304 -202322279 + HAL1 LINE L1 1 213 -2294 473 225 92 75 chr2 50934401 50934574 -202322009 + HAL1 LINE L1 251 426 -2081 586 224 106 12 chr2 50934664 50934825 -202321758 + HAL1 LINE L1 564 739 -1768 380 283 40 10 chr2 50936283 50936382 -202320201 + L2 LINE L2 3201 3302 -11 187 216 0 0 chr2 50939239 50939276 -202317307 - L2 LINE L2 -218 3054 3018 29 0 0 0 chr2 50939624 50939653 -202316930 + AT_rich Low_complexity Low_complexity 1 29 0 189 250 0 42 chr2 50939973 50940021 -202316562 + MIR SINE MIR 24 69 -139 228 300 25 12 chr2 50940941 50941021 -202315562 - MIR SINE MIR -54 208 128 282 323 0 11 chr2 50941211 50941304 -202315279 - MIR SINE MIR -38 224 133 1241 246 25 0 chr2 50941545 50941829 -202314754 + MER58B DNA MER1_type 1 291 -50 393 309 63 45 chr2 50941940 50942146 -202314437 + MIR SINE MIR 42 250 -12 205 28 0 56 chr2 50943196 50943232 -202313351 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 292 296 37 9 chr2 50943482 50943590 -202312993 - MIR SINE MIR -71 191 81 234 0 0 0 chr2 50944144 50944170 -202312413 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 374 369 31 6 chr2 50944173 50944333 -202312250 + MIR3 SINE MIR 31 194 -14 213 163 0 23 chr2 50944411 50944454 -202312129 + CT-rich Low_complexity Low_complexity 3 44 0 247 154 0 0 chr2 50946535 50946574 -202310009 - L3 LINE CR1 -112 1465 1427 332 253 0 11 chr2 50947089 50947180 -202309403 - L1ME3A LINE L1 -326 5844 5755 1009 274 67 51 chr2 50947192 50947959 -202308624 - L1ME3A LINE L1 -1070 5076 4298 2459 78 0 3 chr2 50947976 50948284 -202308299 - AluY SINE Alu -4 307 1 215 182 0 45 chr2 50948361 50948405 -202308178 + polypyrimidine Low_complexity Low_complexity 3 44 0 203 184 0 20 chr2 50948413 50948462 -202308121 + CT-rich Low_complexity Low_complexity 2 49 0 2085 132 3 0 chr2 50948472 50948768 -202307815 - AluSq SINE Alu -14 299 3 19846 97 19 41 chr2 50998818 51002300 -202254283 - L1P LINE L1 -745 5401 1997 4888 55 54 1 chr2 51002425 51003150 -202253433 + L1PA6 LINE L1 5391 6153 -1 210 37 0 0 chr2 51003416 51003443 -202253140 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 230 330 60 44 chr2 51004811 51004993 -202251590 + L2 LINE L2 3113 3297 -16 242 329 0 12 chr2 51007432 51007514 -202249069 + MIR SINE MIR 21 101 -107 1942 210 119 4 chr2 51007991 51008444 -202248139 + MLT1D LTR MaLR 1 505 0 296 136 0 0 chr2 51008917 51008961 -202247622 + MSTA LTR MaLR 385 428 0 1159 181 66 80 chr2 51009010 51009298 -202247285 - AluJo SINE Alu -16 286 3 281 319 57 25 chr2 51009356 51009513 -202247070 + MIR3 SINE MIR 47 208 0 484 264 98 25 chr2 51010922 51011085 -202245498 - MIR SINE MIR -87 175 1 211 351 52 0 chr2 51011085 51011219 -202245364 - MIR SINE MIR -76 186 46 1537 184 73 6 chr2 51011301 51011617 -202244966 + MLT1A1 LTR MaLR 29 365 0 306 0 0 0 chr2 51012530 51012564 -202244019 + (TG)n Simple_repeat Simple_repeat 1 34 0 857 185 34 29 chr2 51012772 51012977 -202243606 - MER20 DNA MER1_type -7 212 7 1742 189 0 7 chr2 51013140 51013436 -202243147 + AluJb SINE Alu 6 299 -13 658 189 211 2 chr2 51013451 51013686 -202242897 - MER33 DNA MER1_type -46 317 1 312 333 121 19 chr2 51013754 51013961 -202242622 + MIR SINE MIR 23 250 -12 31918 97 5 45 chr2 51014159 51018828 -202237755 + L1PA6 LINE L1 11 4445 -1701 6909 57 7 6 chr2 51018828 51020238 -202236345 + L1PA6 LINE L1 4744 6154 0 31918 97 5 45 chr2 51020238 51020893 -202235690 + L1PA6 LINE L1 4445 5124 -1022 7548 27 5 0 chr2 51020570 51021909 -202234674 + L1PA3 LINE L1 4802 6144 -11 214 356 161 0 chr2 51022702 51022820 -202233763 - L2 LINE L2 -15 3257 3121 378 262 51 93 chr2 51023533 51023711 -202232872 - MIR SINE MIR -63 145 27 810 281 16 12 chr2 51024078 51024334 -202232249 + L1M4 LINE L1 4769 5025 -1121 1019 253 66 37 chr2 51024340 51024719 -202231864 + MLT1D LTR MaLR 110 499 -6 222 312 21 43 chr2 51025527 51025620 -202230963 - L2 LINE L2 -1 3271 3181 754 199 143 25 chr2 51025867 51026063 -202230520 - MER20 DNA MER1_type 0 219 1 3050 161 34 14 chr2 51026373 51026962 -202229621 - L1PB4 LINE L1 -3 6153 5553 231 301 118 29 chr2 51027121 51027257 -202229326 + MIR SINE MIR 60 207 -55 * 2519 272 141 19 chr2 51027255 51027692 -202228891 - L2 LINE L2 -392 2922 2540 216 0 0 0 chr2 51027692 51027716 -202228867 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2519 272 141 19 chr2 51027716 51028278 -202228305 - L2 LINE L2 -774 2540 1801 318 298 136 5 chr2 51028297 51028488 -202228095 + L1MC4a LINE L1 4746 4961 -1185 613 244 29 114 chr2 51028762 51029078 -202227505 + L1MC4a LINE L1 5314 5602 -2206 1973 173 102 9 chr2 51029083 51029506 -202227077 - MLT1C LTR MaLR 0 467 6 426 355 100 0 chr2 51029510 51029741 -202226842 + L1MC4a LINE L1 5602 5855 -1953 658 163 207 0 chr2 51031705 51031840 -202224743 + MER31A LTR ERV1 1 163 -322 578 184 86 0 chr2 51031836 51031988 -202224595 - MER63C DNA MER1_type -38 892 728 * 2205 217 57 0 chr2 51031987 51032498 -202224085 - MER63C DNA MER1_type -320 610 71 243 61 0 0 chr2 51032500 51032533 -202224050 + (TG)n Simple_repeat Simple_repeat 2 34 0 266 323 44 25 chr2 51032926 51033084 -202223499 - MIR SINE MIR -30 232 72 220 270 34 0 chr2 51034525 51034614 -202221969 + T-rich Low_complexity Low_complexity 5 96 0 313 331 120 0 chr2 51034731 51034873 -202221710 - L1M4 LINE L1 -3527 2619 2461 227 250 46 28 chr2 51034945 51035053 -202221530 - L1M4 LINE L1 -3907 2239 2130 7525 29 0 5 chr2 51035103 51036449 -202220134 - L1PA4 LINE L1 0 6155 4811 248 240 0 0 chr2 51037594 51037644 -202218939 - L2 LINE L2 -3 3310 3261 706 249 27 9 chr2 51037768 51037993 -202218590 - MER106A DNA MER1_type 0 236 8 361 293 88 103 chr2 51038055 51038318 -202218265 - L2 LINE L2 -8 3264 3006 216 97 0 0 chr2 51038569 51038600 -202217983 + (TG)n Simple_repeat Simple_repeat 2 32 0 197 318 183 16 chr2 51039115 51039241 -202217342 - L2 LINE L2 -5 3267 3121 306 264 48 64 chr2 51039308 51039433 -202217150 + MER103 DNA DNA 1 123 -43 3357 161 55 31 chr2 51039761 51040471 -202216112 - LTR8A LTR ERV1 0 727 1 768 250 49 0 chr2 51040482 51040646 -202215937 + MER5A DNA MER1_type 3 174 -15 233 265 73 0 chr2 51040677 51040745 -202215838 + MIR SINE MIR 101 173 -89 302 361 0 10 chr2 51041001 51041098 -202215485 + L2 LINE L2 3125 3220 -52 223 276 46 35 chr2 51041507 51041594 -202214989 - MIR SINE MIR -92 170 83 2016 99 108 10 chr2 51042029 51042391 -202214192 - LTR7 LTR ERV1 0 450 1 1308 137 62 4 chr2 51042641 51043065 -202213518 + LTR54 LTR ERV1 1 509 -1 549 309 98 4 chr2 51043071 51043327 -202213256 + L2 LINE L2 1908 2187 -1127 236 360 67 25 chr2 51043321 51043560 -202213023 - L2 LINE L2 -2439 875 627 * 180 324 135 14 chr2 51044673 51044821 -202211762 - L2 LINE L2 -182 3090 2925 243 152 0 0 chr2 51045167 51045213 -202211370 - MLT2B2 LTR ERVL -5 510 465 525 46 11 35 chr2 51045215 51045226 -202211357 + (TATAA)n Simple_repeat Simple_repeat 1 95 0 525 46 11 35 chr2 51045226 51045313 -202211270 + (TATAA)n Simple_repeat Simple_repeat 5 89 0 2383 163 8 63 chr2 51045355 51045831 -202210752 - MLT2B2 LTR ERVL -33 451 21 250 241 24 24 chr2 51045972 51046055 -202210528 - L2 LINE L2 -4 3309 3227 434 18 18 0 chr2 51047291 51047346 -202209237 + (CA)n Simple_repeat Simple_repeat 2 57 0 345 159 0 0 chr2 51047926 51047989 -202208594 + GA-rich Low_complexity Low_complexity 3 65 0 383 192 51 0 chr2 51048332 51048410 -202208173 - L1P5 LINE L1 -574 5582 5501 266 263 53 21 chr2 51049169 51049264 -202207319 + MIR SINE MIR 22 119 -143 37602 41 2 0 chr2 51049265 51054691 -202201892 + L1PA4 LINE L1 746 6181 0 41 21 0 0 chr2 51054786 51054834 -202201749 + AT_rich Low_complexity Low_complexity 1 48 0 438 234 43 43 chr2 51057092 51057233 -202199350 + L1M4b LINE L1 24 164 -6695 1740 271 57 0 chr2 51057250 51057652 -202198931 + L1M4b LINE L1 262 686 -6173 1119 293 40 9 chr2 51057669 51058113 -202198470 + L1M4b LINE L1 1951 2408 -4551 213 226 0 0 chr2 51058116 51058169 -202198414 + (TA)n Simple_repeat Simple_repeat 2 54 0 25 51 0 0 chr2 51058180 51058219 -202198364 + AT_rich Low_complexity Low_complexity 1 39 0 273 267 31 101 chr2 51058303 51058561 -202198022 + L1M4b LINE L1 2473 2712 -4426 255 277 145 0 chr2 51058643 51058726 -202197857 - MER46C DNA MER2_type -238 100 6 316 308 17 17 chr2 51058962 51059082 -202197501 + L1M4b LINE L1 3269 3388 -3569 5611 140 72 21 chr2 51059163 51059804 -202196779 + Tigger3b DNA MER2_type 2 609 -2419 1930 153 137 8 chr2 51059804 51060183 -202196400 + MSTA LTR MaLR 1 428 0 5611 140 72 21 chr2 51060183 51060317 -202196266 + Tigger3b DNA MER2_type 609 735 -2293 2135 186 19 21 chr2 51060317 51060742 -202195841 - MSTB LTR MaLR 0 426 3 5611 140 72 21 chr2 51060742 51061086 -202195497 + Tigger3b DNA MER2_type 735 1217 -14 4439 159 62 7 chr2 51061086 51061921 -202194662 + L1PA16 LINE L1 5258 6138 -28 180 228 0 0 chr2 51062252 51062309 -202194274 + (TAAA)n Simple_repeat Simple_repeat 4 60 0 3071 247 12 31 chr2 51062417 51063169 -202193414 + L1MB4 LINE L1 26 763 -5621 * 4547 209 42 13 chr2 51063140 51065198 -202191385 + L1MB4 LINE L1 4282 6406 -10 507 264 162 47 chr2 51065205 51065731 -202190852 + L1M4b LINE L1 3553 4131 -2826 486 283 80 49 chr2 51065981 51066417 -202190166 + L1M4b LINE L1 4484 4935 -2022 228 86 0 0 chr2 51066418 51066453 -202190130 + (TC)n Simple_repeat Simple_repeat 2 36 0 786 331 52 9 chr2 51066556 51066900 -202189683 + LTR16A LTR ERVL 83 441 -9 308 354 39 0 chr2 51067000 51067130 -202189453 + L1ME LINE L1 12 146 -5924 275 316 102 28 chr2 51067350 51067673 -202188910 + L1M4b LINE L1 5606 5952 -1005 327 293 73 0 chr2 51067786 51067909 -202188674 + L1M LINE L1 6066 6197 -2422 1716 163 60 41 chr2 51067952 51068320 -202188263 - THE1C LTR MaLR 0 375 1 23 33 0 0 chr2 51068344 51068374 -202188209 + AT_rich Low_complexity Low_complexity 1 30 0 194 217 0 17 chr2 51068828 51068888 -202187695 + GA-rich Low_complexity Low_complexity 3 61 0 451 251 94 10 chr2 51069021 51069226 -202187357 - MLT1L LTR MaLR -224 391 174 863 228 16 21 chr2 51069290 51069479 -202187104 + MER20 DNA MER1_type 3 190 -29 185 400 10 10 chr2 51069754 51069854 -202186729 + MIR SINE MIR 15 114 -148 407 246 99 13 chr2 51069854 51070086 -202186497 + L1M4 LINE L1 4286 4537 -1609 325 274 40 24 chr2 51070183 51070307 -202186276 + MIR SINE MIR 129 254 -8 984 187 40 132 chr2 51071680 51072082 -202184501 + MLT1A1 LTR MaLR 1 365 0 2155 86 0 43 chr2 51072126 51072429 -202184154 + AluSx SINE Alu 1 290 -22 409 311 9 16 chr2 51072721 51072899 -202183684 + MIR SINE MIR 13 191 -64 553 264 78 12 chr2 51073615 51073857 -202182726 + MER112 DNA MER1_type 2 259 -1 1839 63 0 4 chr2 51073924 51074161 -202182422 - L1PA7 LINE L1 -13 6141 5906 402 297 127 4 chr2 51074519 51074779 -202181804 + MLT1H1 LTR MaLR 1 255 -300 220 136 23 0 chr2 51074947 51074991 -202181592 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 289 321 55 18 chr2 51075304 51075413 -202181170 - L2 LINE L2 -22 3291 3179 2136 138 0 0 chr2 51075759 51076070 -202180513 - AluSx SINE Alu -1 311 1 202 186 68 17 chr2 51079193 51079252 -202177331 + (TCTCTG)n Simple_repeat Simple_repeat 1 62 0 201 328 92 34 chr2 51079301 51079420 -202177163 + L3 LINE CR1 1447 1572 -5 21 57 0 0 chr2 51079724 51079759 -202176824 + AT_rich Low_complexity Low_complexity 1 35 0 331 269 11 11 chr2 51079786 51079879 -202176704 - MIR SINE MIR 0 262 170 677 247 0 14 chr2 51080288 51080434 -202176149 - MIR SINE MIR -112 150 7 252 342 45 100 chr2 51080763 51081032 -202175551 + L2 LINE L2 2992 3245 -27 849 255 128 49 chr2 51081037 51081528 -202175055 + L2 LINE L2 1560 2170 -1144 591 361 40 29 chr2 51081529 51081875 -202174708 + L2 LINE L2 2347 2696 -618 924 277 29 91 chr2 51081911 51082539 -202174044 - L1ME3A LINE L1 -16 6154 5566 390 219 23 145 chr2 51082552 51082862 -202173721 - L1MC4 LINE L1 -36 8006 7735 240 296 192 24 chr2 51082862 51082987 -202173596 - MER5A DNA MER1_type -3 186 41 227 252 90 9 chr2 51083017 51083128 -202173455 - L1MC4 LINE L1 -294 7748 7629 * 368 288 101 52 chr2 51083127 51083662 -202172921 - L1MEd LINE L1 -4755 1555 988 243 60 60 0 chr2 51083849 51083899 -202172684 + (TA)n Simple_repeat Simple_repeat 2 54 0 195 114 0 0 chr2 51084401 51084436 -202172147 + (A)n Simple_repeat Simple_repeat 1 35 0 2047 119 7 32 chr2 51084695 51085005 -202171578 + AluSq SINE Alu 1 302 -11 237 277 10 50 chr2 51085557 51085658 -202170925 + MIR SINE MIR 58 154 -108 321 26 0 0 chr2 51085857 51085895 -202170688 + (TG)n Simple_repeat Simple_repeat 2 39 0 1383 278 141 68 chr2 51086904 51087817 -202168766 - L2 LINE L2 0 3313 2284 744 160 95 0 chr2 51087817 51087986 -202168597 + MER53 DNA DNA 3 187 -2 1383 278 141 68 chr2 51087986 51088143 -202168440 - L2 LINE L2 -1029 2284 2140 402 284 99 54 chr2 51088930 51089152 -202167431 + MIR SINE MIR 31 262 0 23 0 0 0 chr2 51089520 51089543 -202167040 + AT_rich Low_complexity Low_complexity 1 23 0 674 192 24 0 chr2 51090137 51090262 -202166321 + FRAM SINE Alu 10 137 -39 227 227 15 0 chr2 51090269 51090335 -202166248 + GA-rich Low_complexity Low_complexity 1 67 0 341 237 0 0 chr2 51090407 51090483 -202166100 + MER116 DNA Mariner 2 77 -3 213 282 170 29 chr2 51091431 51091565 -202165018 - MIR SINE MIR -66 142 32 219 196 39 0 chr2 51092715 51092766 -202163817 - L2 LINE L2 0 3313 3261 247 319 32 19 chr2 51092922 51093079 -202163504 + L1ME LINE L1 5745 5903 -218 26724 92 10 8 chr2 51093561 51098484 -202158099 - L1PA7 LINE L1 0 6154 1226 2388 119 31 0 chr2 51099242 51099595 -202156988 + THE1B LTR MaLR 1 364 0 2201 93 3 3 chr2 51100397 51100686 -202155897 + AluY SINE Alu 1 289 -22 929 274 25 4 chr2 51101103 51101344 -202155239 + MIR SINE MIR 16 261 -1 197 308 19 39 chr2 51101838 51101942 -202154641 - MIR SINE MIR -105 157 56 455 321 65 4 chr2 51102627 51102873 -202153710 - MIR SINE MIR 0 262 2 189 74 0 0 chr2 51103908 51103935 -202152648 + (TG)n Simple_repeat Simple_repeat 2 28 0 383 212 77 4 chr2 51104066 51104180 -202152403 + MIR SINE MIR 23 151 -62 233 300 50 12 chr2 51104418 51104498 -202152085 - L2 LINE L2 -1 3312 3230 253 289 52 30 chr2 51105296 51105431 -202151152 - MLT1J2 LTR MaLR -236 214 77 2205 95 0 7 chr2 51106086 51106369 -202150214 + AluY SINE Alu 1 281 -30 186 370 65 0 chr2 51106577 51106669 -202149914 + MIR SINE MIR 34 131 -77 568 305 131 15 chr2 51107022 51107350 -202149233 - L1ME4a LINE L1 -226 5895 5530 407 315 95 17 chr2 51107363 51107595 -202148988 + MIR SINE MIR 13 262 0 24 53 0 0 chr2 51107854 51107892 -202148691 + AT_rich Low_complexity Low_complexity 1 38 0 732 113 9 0 chr2 51107986 51108092 -202148491 + U6 snRNA snRNA 1 107 0 12251 127 24 20 chr2 51108092 51110211 -202146372 + L1P LINE L1 12 2139 -4007 8867 191 17 4 chr2 51110323 51112394 -202144189 - L1P4 LINE L1 -648 5515 3425 362 293 9 26 chr2 51112400 51112516 -202144067 + CT-rich Low_complexity Low_complexity 3 116 0 256 191 0 48 chr2 51113935 51113998 -202142585 + CT-rich Low_complexity Low_complexity 4 63 0 544 242 119 44 chr2 51114037 51114330 -202142253 + MER113 DNA MER1_type? 176 490 -31 502 288 204 32 chr2 51114404 51114858 -202141725 - L2 LINE L2 -5 3308 2751 183 80 0 0 chr2 51115798 51115823 -202140760 + (TG)n Simple_repeat Simple_repeat 1 25 0 218 342 26 26 chr2 51115832 51115946 -202140637 + L2 LINE L2 3196 3309 -4 221 307 13 40 chr2 51116499 51116574 -202140009 + MER5A DNA MER1_type 34 106 -83 191 351 95 0 chr2 51116887 51116961 -202139622 + MIR SINE MIR 11 91 -171 297 151 0 0 chr2 51116988 51117041 -202139542 + (TG)n Simple_repeat Simple_repeat 2 54 0 355 289 8 25 chr2 51117048 51117169 -202139414 + MIR SINE MIR 124 242 -20 181 338 59 0 chr2 51117471 51117539 -202139044 - MIR SINE MIR -81 127 56 282 364 91 0 chr2 51118549 51118692 -202137891 - MIR SINE MIR -3 259 104 1003 156 25 0 chr2 51118830 51119029 -202137554 + L1MC3 LINE L1 7582 7785 0 572 320 166 24 chr2 51119092 51119761 -202136822 - L2 LINE L2 -656 2658 1895 606 28 0 0 chr2 51119881 51119953 -202136630 + (TA)n Simple_repeat Simple_repeat 1 72 0 2219 82 7 7 chr2 51120007 51120299 -202136284 - AluSq SINE Alu -21 292 1 246 317 139 44 chr2 51122219 51122399 -202134184 - MIR3 SINE MIR -9 199 3 25 31 0 0 chr2 51123553 51123585 -202132998 + AT_rich Low_complexity Low_complexity 1 32 0 200 306 45 9 chr2 51123746 51123857 -202132726 - MIR SINE MIR -13 249 135 409 248 51 0 chr2 51123859 51123976 -202132607 + MER5C DNA MER1_type 2 124 -200 478 232 106 26 chr2 51124114 51124265 -202132318 + MER63A DNA MER1_type 44 206 -4 1093 275 162 48 chr2 51124665 51125703 -202130880 - HAL1 LINE L1 -1151 1356 201 5248 127 42 8 chr2 51126091 51127471 -202129112 + L1PA16 LINE L1 4751 6166 0 2655 226 28 69 chr2 51128216 51129043 -202127540 + L1ME1 LINE L1 5298 6090 -76 837 222 61 15 chr2 51129043 51129241 -202127342 + MLT1F1 LTR MaLR 351 557 -10 264 165 23 83 chr2 51129246 51129367 -202127216 + (TTATA)n Simple_repeat Simple_repeat 5 119 -10 1872 147 13 17 chr2 51129367 51129667 -202126916 - AluSx SINE Alu -13 299 1 264 165 23 83 chr2 51129667 51129678 -202126905 + (TTATA)n Simple_repeat Simple_repeat 119 129 0 291 54 0 0 chr2 51129765 51129802 -202126781 + (TA)n Simple_repeat Simple_repeat 1 37 0 359 307 68 44 chr2 51130127 51130332 -202126251 - L2 LINE L2 -3 3310 3101 963 246 53 9 chr2 51131406 51131634 -202124949 - MIR SINE MIR -14 248 11 222 346 79 106 chr2 51132595 51133049 -202123534 - L2 LINE L2 -22 3250 2809 700 271 170 60 chr2 51133144 51133590 -202122993 + L2 LINE L2 2814 3308 -5 306 343 186 5 chr2 51133602 51133812 -202122771 - L2 LINE L2 -609 2705 2458 233 340 66 52 chr2 51133886 51134098 -202122485 + MLT1I LTR MaLR 80 294 -115 1967 137 37 0 chr2 51134260 51134559 -202122024 + AluSg SINE Alu 1 310 0 425 328 109 19 chr2 51134599 51134910 -202121673 - L2 LINE L2 -856 2458 2120 907 326 145 38 chr2 51135988 51137002 -202119581 - L2 LINE L2 -491 2823 1701 469 302 157 38 chr2 51137099 51137552 -202119031 - L2 LINE L2 -2463 851 345 2319 75 0 25 chr2 51137554 51137872 -202118711 + AluY SINE Alu 2 311 0 21 0 0 0 chr2 51138054 51138075 -202118508 + AT_rich Low_complexity Low_complexity 1 21 0 718 241 92 29 chr2 51139892 51140208 -202116375 - MER69B DNA AcHobo -203 1023 688 284 315 101 67 chr2 51140223 51140884 -202115699 + L1MEc LINE L1 61 744 -5652 391 42 0 0 chr2 51140895 51140943 -202115640 - THE1A LTR MaLR -307 48 1 11600 104 2 0 chr2 51140949 51142519 -202114064 - THE1A-int LTR MaLR -6 1574 2 2700 96 0 0 chr2 51142520 51142875 -202113708 - THE1A LTR MaLR 0 355 1 3056 263 145 31 chr2 51142953 51145337 -202111246 + L1MEc LINE L1 2065 4681 -1534 403 247 108 38 chr2 51145487 51145645 -202110938 - Charlie8 DNA MER1_type -2141 276 108 569 303 69 30 chr2 51147500 51147731 -202108852 + MIR SINE MIR 20 259 -3 21 0 0 0 chr2 51149706 51149727 -202106856 + AT_rich Low_complexity Low_complexity 1 21 0 223 314 57 46 chr2 51150795 51150970 -202105613 - MIR SINE MIR 0 262 86 1842 104 114 11 chr2 51151504 51151784 -202104799 - AluSg1 SINE Alu 0 309 1 1940 117 9 122 chr2 51151892 51152318 -202104265 - L1PA16 LINE L1 -1 6165 5788 475 174 0 0 chr2 51152605 51152691 -202103892 - MER103 DNA DNA -52 114 29 771 294 68 45 chr2 51152810 51153147 -202103436 + LTR16A LTR ERVL 95 439 -11 1175 303 29 60 chr2 51153158 51153713 -202102870 + HERV16 LTR ERVL 2 539 -4457 356 331 0 0 chr2 51153736 51153869 -202102714 + ERVL LTR ERVL 2774 2906 -2858 5492 31 0 0 chr2 51153876 51154520 -202102063 - L1PA3 LINE L1 -3 6152 5509 4286 22 0 0 chr2 51154521 51155144 -202101439 + L1PA3 LINE L1 4890 5512 -643 2440 333 60 46 chr2 51155194 51156876 -202099707 + ERVL LTR ERVL 2947 4652 -1112 304 349 19 14 chr2 51156899 51157108 -202099475 + ERVL LTR ERVL 4787 4996 0 526 339 39 15 chr2 51157178 51157438 -202099145 + LTR16A LTR ERVL 107 372 -78 26 30 0 0 chr2 51157945 51157978 -202098605 + AT_rich Low_complexity Low_complexity 1 33 0 866 252 82 58 chr2 51158144 51158509 -202098074 + MLT1A2 LTR MaLR 1 374 0 31 26 0 0 chr2 51159257 51159295 -202097288 + AT_rich Low_complexity Low_complexity 1 38 0 315 0 0 0 chr2 51159490 51159525 -202097058 + (TG)n Simple_repeat Simple_repeat 2 36 0 245 278 88 60 chr2 51159600 51159749 -202096834 - HAL1 LINE L1 -1189 1318 1175 3828 41 2 0 chr2 51159749 51160211 -202096372 - L1PA5 LINE L1 -7 6147 5685 245 278 88 60 chr2 51160211 51160540 -202096043 - HAL1 LINE L1 -1332 1175 827 282 95 0 0 chr2 51160926 51160968 -202095615 + (TG)n Simple_repeat Simple_repeat 2 43 0 22 0 0 0 chr2 51162044 51162066 -202094517 + AT_rich Low_complexity Low_complexity 1 22 0 604 293 30 56 chr2 51164274 51164506 -202092077 + L2 LINE L2 2669 2894 -420 5070 166 14 53 chr2 51164526 51164720 -202091863 - L1MA6 LINE L1 -12 6288 6088 2887 3 0 0 chr2 51164720 51165030 -202091553 - AluYa5 SINE Alu -1 310 1 5070 166 14 53 chr2 51165030 51166163 -202090420 - L1MA6 LINE L1 -212 6088 5020 2256 101 0 3 chr2 51166163 51166459 -202090124 - AluSg SINE Alu -14 296 2 5070 166 14 53 chr2 51166459 51166625 -202089958 - L1MA6 LINE L1 -1280 5020 4849 16023 189 13 11 chr2 51166628 51170911 -202085672 + L1PA13 LINE L1 1883 6163 0 7436 176 36 10 chr2 51170906 51172464 -202084119 - L1MA6 LINE L1 -1286 4860 3262 * 344 337 102 44 chr2 51172466 51172828 -202083755 + L2 LINE L2 2890 3272 -41 204 238 0 0 chr2 51172839 51172881 -202083702 + MER5C DNA MER1_type 34 75 -249 2326 77 3 10 chr2 51173557 51173870 -202082713 + AluY SINE Alu 1 311 0 304 316 244 10 chr2 51173911 51174120 -202082463 - MIR SINE MIR -1 261 4 498 118 0 0 chr2 51174158 51174251 -202082332 + (TAGA)n Simple_repeat Simple_repeat 2 94 0 295 311 101 17 chr2 51174451 51174570 -202082013 + MER5A DNA MER1_type 61 189 0 1668 170 143 14 chr2 51175123 51175481 -202081102 - MSTA LTR MaLR 0 428 19 1801 161 24 34 chr2 51175481 51175860 -202080723 - THE1C LTR MaLR 0 375 1 1668 170 143 14 chr2 51175860 51175872 -202080711 - MSTA LTR MaLR -409 19 10 2179 128 3 0 chr2 51175962 51176267 -202080316 - AluSg SINE Alu -4 306 1 23 33 0 0 chr2 51177161 51177191 -202079392 + AT_rich Low_complexity Low_complexity 1 30 0 1912 176 15 47 chr2 51179811 51180214 -202076369 - MLT1B LTR MaLR 0 390 1 455 262 65 90 chr2 51180505 51180795 -202075788 - MER102b DNA MER1_type 0 341 59 1927 155 7 3 chr2 51180976 51181279 -202075304 - AluJb SINE Alu 0 312 9 506 210 151 0 chr2 51181834 51181953 -202074630 - MER58A DNA MER1_type 0 163 27 271 268 0 28 chr2 51183215 51183286 -202073297 + L2 LINE L2 3186 3254 -18 2125 99 0 3 chr2 51184568 51184862 -202071721 - AluY SINE Alu -18 293 1 4438 172 46 14 chr2 51184935 51186245 -202070338 - L1MA6 LINE L1 -133 6167 4824 267 31 0 0 chr2 51186712 51186744 -202069839 + (TG)n Simple_repeat Simple_repeat 1 32 0 736 242 31 0 chr2 51186966 51187160 -202069423 - HAL1 LINE L1 -1048 1459 1260 879 273 92 32 chr2 51187526 51187926 -202068657 + LTR16A1 LTR ERVL 34 457 0 312 247 12 0 chr2 51187928 51188013 -202068570 - HAL1 LINE L1 -1423 1084 999 311 49 24 0 chr2 51188173 51188214 -202068369 - MLT2B3 LTR ERVL -2 552 511 2260 166 13 53 chr2 51188214 51188665 -202067918 + MER65A LTR ERV1 1 433 -12 3157 170 15 17 chr2 51188682 51189217 -202067366 - MLT2B3 LTR ERVL -20 534 1 816 247 102 8 chr2 51189715 51189950 -202066633 - MIR SINE MIR -5 257 1 2280 210 77 62 chr2 51190331 51190668 -202065915 - L1ME1 LINE L1 -45 6121 5790 1132 169 0 0 chr2 51190668 51190863 -202065720 - L1PB4 LINE L1 -1 6155 5961 2280 210 77 62 chr2 51190863 51191308 -202065275 - L1ME1 LINE L1 -376 5790 5335 1352 36 6 0 chr2 51191308 51191476 -202065107 - L1PA4 LINE L1 0 6155 5987 2280 210 77 62 chr2 51191476 51191687 -202064896 - L1ME1 LINE L1 -831 5335 5129 192 292 14 14 chr2 51193094 51193166 -202063417 - MIR3 SINE MIR -11 197 126 408 341 73 0 chr2 51193602 51193766 -202062817 - MIR SINE MIR -70 192 17 205 155 35 0 chr2 51193822 51193880 -202062703 + (TA)n Simple_repeat Simple_repeat 1 60 0 1733 143 0 23 chr2 51193880 51194146 -202062437 - AluSx SINE Alu -16 296 37 599 244 0 0 chr2 51194918 51195033 -202061550 + MER20 DNA MER1_type 1 115 -104 * 688 163 30 114 chr2 51195032 51195198 -202061385 + MER20 DNA MER1_type 68 219 0 180 273 0 0 chr2 51195212 51195256 -202061327 + MIR SINE MIR 203 246 -16 410 252 48 141 chr2 51195362 51195652 -202060931 - LTR67 LTR ERVL -292 265 3 254 339 178 28 chr2 51195860 51196432 -202060151 + L2 LINE L2 1905 2562 -752 741 277 34 8 chr2 51196752 51196987 -202059596 + MER110 LTR ERV1 247 487 -4 385 273 35 41 chr2 51197926 51198098 -202058485 - L3b LINE CR1 -124 1459 1289 191 59 0 29 chr2 51198211 51198245 -202058338 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 726 281 36 36 chr2 51198907 51199156 -202057427 + MIR SINE MIR 13 261 -1 2371 66 3 10 chr2 51200173 51200474 -202056109 - AluY SINE Alu -12 299 1 209 189 0 0 chr2 51200532 51200569 -202056014 + (CA)n Simple_repeat Simple_repeat 2 38 0 4765 165 46 7 chr2 51201226 51202095 -202054488 + MER4D LTR ERV1 1 903 0 1705 185 22 84 chr2 51202895 51203077 -202053506 + MLT1B LTR MaLR 1 193 -197 1061 226 75 72 chr2 51203077 51203466 -202053117 - MLT1B LTR MaLR 0 390 1 1705 185 22 84 chr2 51203466 51203699 -202052884 + MLT1B LTR MaLR 193 390 0 1121 229 57 64 chr2 51204025 51204467 -202052116 + MER39 LTR ERV1 73 707 0 22 0 0 0 chr2 51205613 51205635 -202050948 + AT_rich Low_complexity Low_complexity 1 22 0 18798 73 7 3 chr2 51207659 51211043 -202045540 + L1PA6 LINE L1 2771 6153 -1 360 368 53 13 chr2 51211345 51211573 -202045010 + L1M4 LINE L1 4742 4978 -1168 227 295 57 9 chr2 51211956 51212061 -202044522 - LTR67 LTR ERVL 0 557 448 1801 276 76 38 chr2 51212981 51213834 -202042749 - L1ME3A LINE L1 -26 6144 5259 280 219 37 0 chr2 51214021 51214103 -202042480 + (TG)n Simple_repeat Simple_repeat 2 86 0 339 333 0 0 chr2 51214118 51214274 -202042309 - L1ME3A LINE L1 -1208 4938 4783 2132 133 3 0 chr2 51214410 51214711 -202041872 - AluSx SINE Alu -8 304 3 6248 76 19 22 chr2 51214775 51215152 -202041431 + L1PA7 LINE L1 5089 5466 -688 2184 93 7 0 chr2 51215152 51215467 -202041116 + AluY SINE Alu 1 317 0 6248 76 19 22 chr2 51215467 51216144 -202040439 + L1PA7 LINE L1 5466 6141 -13 235 239 11 109 chr2 51216614 51216706 -202039877 + L2 LINE L2 3190 3272 0 249 283 100 50 chr2 51216907 51217267 -202039316 - L1MC5 LINE L1 -81 7880 7503 482 232 117 106 chr2 51217602 51218235 -202038348 - L1MD3 LINE L1 -742 7219 6625 25 0 0 0 chr2 51218472 51218497 -202038086 + AT_rich Low_complexity Low_complexity 1 25 0 297 300 139 38 chr2 51218602 51218869 -202037714 + HAL1 LINE L1 1611 1904 -603 196 162 27 0 chr2 51219213 51219250 -202037333 - MIR SINE MIR -98 164 127 1954 169 19 13 chr2 51219427 51219800 -202036783 - THE1C LTR MaLR 0 375 1 388 305 99 20 chr2 51220814 51221296 -202035287 + L1M4c LINE L1 1248 1924 -4639 23 54 0 0 chr2 51221359 51221396 -202035187 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr2 51221976 51222004 -202034579 + AT_rich Low_complexity Low_complexity 1 28 0 26 88 0 0 chr2 51222143 51222211 -202034372 + AT_rich Low_complexity Low_complexity 1 68 0 1621 217 14 14 chr2 51222245 51222609 -202033974 + MLT1A1 LTR MaLR 1 364 -1 1993 112 14 24 chr2 51222713 51223009 -202033574 - AluSx SINE Alu -16 296 4 496 301 23 17 chr2 51223102 51223278 -202033305 - MER5B DNA MER1_type -1 177 1 27 62 0 0 chr2 51223579 51223627 -202032956 + AT_rich Low_complexity Low_complexity 1 48 0 24 0 0 0 chr2 51223668 51223692 -202032891 + AT_rich Low_complexity Low_complexity 1 24 0 378 0 0 0 chr2 51223924 51223966 -202032617 + (TA)n Simple_repeat Simple_repeat 2 43 0 30 0 0 0 chr2 51224037 51224067 -202032516 + AT_rich Low_complexity Low_complexity 1 30 0 463 296 82 27 chr2 51224550 51224881 -202031702 - L1MEc LINE L1 -6011 385 37 260 277 0 21 chr2 51224887 51224981 -202031602 + A-rich Low_complexity Low_complexity 2 93 0 23 54 0 0 chr2 51225222 51225259 -202031324 + AT_rich Low_complexity Low_complexity 1 37 0 2158 98 3 16 chr2 51225352 51225657 -202030926 - AluSq SINE Alu -12 301 1 641 141 85 106 chr2 51225664 51225863 -202030720 - L1MA8 LINE L1 -3 6288 6094 * 1701 143 52 68 chr2 51225860 51226245 -202030338 + L1MA7 LINE L1 5645 6023 -268 2322 104 0 0 chr2 51226780 51227087 -202029496 + AluSq SINE Alu 1 307 -6 23 0 0 0 chr2 51227183 51227206 -202029377 + AT_rich Low_complexity Low_complexity 1 23 0 1464 266 90 30 chr2 51227316 51227940 -202028643 + L1MEc LINE L1 36 696 -5700 572 294 110 70 chr2 51230289 51230661 -202025922 + L1MC5 LINE L1 5531 5887 -2074 2046 115 31 3 chr2 51230661 51230948 -202025635 + AluSx SINE Alu 1 295 -17 572 294 110 70 chr2 51230948 51232177 -202024406 + L1MC5 LINE L1 5887 7221 -740 210 37 0 0 chr2 51232359 51232386 -202024197 + (CAA)n Simple_repeat Simple_repeat 1 27 0 233 300 73 41 chr2 51232397 51232617 -202023966 + L1MC5 LINE L1 7309 7535 -426 428 289 81 28 chr2 51232659 51232943 -202023640 + L1MC5 LINE L1 7612 7910 -51 22 56 0 0 chr2 51232974 51233010 -202023573 + AT_rich Low_complexity Low_complexity 1 36 0 288 0 0 0 chr2 51233420 51233452 -202023131 + (CA)n Simple_repeat Simple_repeat 2 33 0 191 218 18 0 chr2 51236151 51236206 -202020377 + (CATATA)n Simple_repeat Simple_repeat 4 59 0 243 0 0 0 chr2 51236330 51236357 -202020226 + (CTA)n Simple_repeat Simple_repeat 1 27 0 189 0 0 0 chr2 51237570 51237591 -202018992 + (A)n Simple_repeat Simple_repeat 1 21 0 498 281 114 19 chr2 51237795 51238005 -202018578 - MIR SINE MIR 0 262 33 502 292 104 34 chr2 51238021 51238356 -202018227 + L2 LINE L2 2698 3304 -9 291 220 9 18 chr2 51238357 51238466 -202018117 + GA-rich Low_complexity Low_complexity 1 108 0 265 294 64 9 chr2 51238891 51239000 -202017583 - MIR SINE MIR 0 262 148 3424 160 21 14 chr2 51240313 51240821 -202015762 - L1MA6 LINE L1 -5 7714 7198 192 77 0 0 chr2 51240821 51240847 -202015736 + (TA)n Simple_repeat Simple_repeat 1 26 0 3424 160 21 14 chr2 51240847 51241001 -202015582 - L1MA6 LINE L1 -521 7198 7047 13817 190 46 12 chr2 51241005 51242604 -202013979 - L1MA6 LINE L1 -846 6719 5176 180 0 0 0 chr2 51242604 51242624 -202013959 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 13817 190 46 12 chr2 51242624 51244176 -202012407 - L1MA6 LINE L1 -2389 5176 3462 226 97 0 0 chr2 51244176 51244207 -202012376 + (TTCC)n Simple_repeat Simple_repeat 4 34 0 351 70 0 56 chr2 51244211 51244282 -202012301 + (TTTCC)n Simple_repeat Simple_repeat 5 71 0 519 199 0 35 chr2 51244292 51244463 -202012120 + CT-rich Low_complexity Low_complexity 1 165 0 5976 149 43 12 chr2 51244464 51245801 -202010782 - L1MA6 LINE L1 -4068 3497 2202 1660 193 20 0 chr2 51245801 51246102 -202010481 - AluJb SINE Alu -5 307 1 5976 149 43 12 chr2 51246102 51247327 -202009256 - L1MA6 LINE L1 -5363 2202 650 231 36 0 0 chr2 51247327 51247355 -202009228 + (TCTCC)n Simple_repeat Simple_repeat 4 31 0 5976 149 43 12 chr2 51247355 51248017 -202008566 - L1MA6 LINE L1 -6915 650 10 1252 180 29 7 chr2 51248014 51248286 -202008297 - L1 LINE L1 -865 5281 5004 * 7932 170 43 4 chr2 51248286 51249863 -202006720 + L1 LINE L1 3356 4994 -1152 355 178 27 27 chr2 51250107 51250180 -202006403 + Tigger2a DNA MER2_type 1 73 -361 628 223 16 0 chr2 51250244 51250365 -202006218 + FRAM SINE Alu 31 153 -23 867 206 0 7 chr2 51250367 51250522 -202006061 - MER8 DNA MER2_type -84 155 2 661 22 0 22 chr2 51250837 51250926 -202005657 + (TCTA)n Simple_repeat Simple_repeat 4 90 0 3438 136 39 3 chr2 51251245 51251834 -202004749 + LTR38B LTR ERV1 1 610 0 968 290 102 44 chr2 51252397 51253390 -202003193 + HAL1b LINE L1 251 1300 -48 781 247 22 0 chr2 51253478 51253660 -202002923 + MSTD LTR MaLR 1 186 -210 323 137 0 0 chr2 51253668 51253719 -202002864 + L1PB4 LINE L1 5858 5908 -248 2050 137 139 5 chr2 51253722 51254095 -202002488 + MSTA LTR MaLR 1 423 -5 1237 171 25 0 chr2 51254097 51254342 -202002241 + L1PB4 LINE L1 5904 6154 -2 399 274 65 28 chr2 51254349 51254564 -202002019 + L1MEc LINE L1 2216 2438 -3958 360 0 0 0 chr2 51254627 51254667 -202001916 + (CA)n Simple_repeat Simple_repeat 1 40 0 390 336 0 0 chr2 51254752 51254868 -202001715 + L2 LINE L2 3193 3308 -5 349 153 0 0 chr2 51254980 51255039 -202001544 + MSTD LTR MaLR 336 394 -2 328 299 24 24 chr2 51255046 51255173 -202001410 - MLT1I LTR MaLR -33 376 250 194 220 17 0 chr2 51255583 51255642 -202000941 + CT-rich Low_complexity Low_complexity 2 61 0 8450 99 7 5 chr2 51255901 51257118 -201999465 - L1PA7 LINE L1 -1441 4705 3486 6810 69 3 1 chr2 51257119 51258564 -201998019 + L1PA7 LINE L1 4713 6154 0 485 222 42 7 chr2 51258564 51258708 -201997875 + Charlie2 DNA MER1_type 2140 2288 -574 375 321 36 22 chr2 51258728 51258952 -201997631 + L1MC/D LINE L1 5527 5753 -2055 709 87 0 0 chr2 51259834 51259926 -201996657 + L1PA4 LINE L1 1 92 -6054 38037 42 5 1 chr2 51259930 51265441 -201991142 + L1PA4 LINE L1 623 6153 -2 261 257 152 19 chr2 51266952 51267057 -201989526 - MLT1F LTR MaLR -16 526 408 618 314 38 0 chr2 51267568 51267751 -201988832 - MIR SINE MIR -27 235 42 306 106 0 0 chr2 51267751 51267798 -201988785 + (CA)n Simple_repeat Simple_repeat 1 47 0 618 314 38 0 chr2 51267798 51267824 -201988759 - MIR SINE MIR -220 42 18 3105 167 11 11 chr2 51267825 51268371 -201988212 + MER89 LTR ERV1 5 550 -9 335 370 17 0 chr2 51268695 51268814 -201987769 - MIR SINE MIR -114 148 28 13430 201 42 29 chr2 51269174 51271174 -201985409 + L1MA4A LINE L1 4 1976 -5029 2148 124 13 0 chr2 51271174 51271480 -201985103 + AluSg SINE Alu 1 310 0 13430 201 42 29 chr2 51271480 51271993 -201984590 + L1MA4A LINE L1 1976 2481 -4524 2847 7 0 0 chr2 51271993 51272301 -201984282 + AluYa5 SINE Alu 1 308 -3 13430 201 42 29 chr2 51272301 51276688 -201979895 + L1MA4A LINE L1 2481 6998 -7 2625 43 0 0 chr2 51277165 51277467 -201979116 - AluY SINE Alu -9 302 1 2608 202 75 32 chr2 51280747 51281504 -201975079 - L1MC4 LINE L1 -190 7852 7063 849 324 29 39 chr2 51281612 51282023 -201974560 + LTR16B LTR ERVL 58 464 0 467 171 12 0 chr2 51282029 51282111 -201974472 - L1MC4 LINE L1 -1025 7017 6935 1491 204 86 49 chr2 51282116 51282607 -201973976 - L1MD2 LINE L1 -15 6344 5836 605 228 116 9 chr2 51282626 51282841 -201973742 - L1MC4 LINE L1 -787 7255 7018 893 210 28 83 chr2 51282882 51283172 -201973411 - L1MD2 LINE L1 -423 5819 5546 1133 275 128 34 chr2 51283175 51283785 -201972798 - L1MC4a LINE L1 -943 6865 6199 207 189 0 0 chr2 51283810 51283847 -201972736 + (TCTA)n Simple_repeat Simple_repeat 2 38 0 3292 148 50 2 chr2 51284319 51284859 -201971724 + MER6A DNA MER2_type 40 605 0 501 255 60 17 chr2 51284869 51285183 -201971400 - L1ME LINE L1 -567 5603 5280 227 322 85 12 chr2 51285399 51285657 -201970926 - L1ME LINE L1 -1113 5033 4757 426 294 69 13 chr2 51285689 51286067 -201970516 - L1ME LINE L1 -1443 4703 4305 2140 114 73 23 chr2 51286075 51286417 -201970166 + THE1B LTR MaLR 1 359 -5 989 319 44 31 chr2 51286418 51286551 -201970032 - L1ME LINE L1 -1854 4292 4162 225 108 0 0 chr2 51286551 51286588 -201969995 + (TA)n Simple_repeat Simple_repeat 1 37 0 989 319 44 31 chr2 51286588 51287138 -201969445 - L1ME LINE L1 -1984 4162 3600 1066 207 0 5 chr2 51287140 51287353 -201969230 + MER67D LTR ERV1 1 212 -302 1569 287 68 48 chr2 51287530 51288170 -201968413 - HAL1 LINE L1 -563 1944 1267 1904 115 23 40 chr2 51288170 51288474 -201968109 - AluSg SINE Alu -11 299 1 1569 287 68 48 chr2 51288474 51289055 -201967528 - HAL1 LINE L1 -1240 1267 699 2252 98 3 7 chr2 51289979 51290286 -201966297 + AluSp SINE Alu 1 306 -7 348 333 109 0 chr2 51290582 51290738 -201965845 - HAL1 LINE L1 -2050 457 285 313 229 107 61 chr2 51291502 51291633 -201964950 - MIR SINE MIR -9 253 117 306 0 0 0 chr2 51291978 51292012 -201964571 + (CACAT)n Simple_repeat Simple_repeat 2 35 0 23 54 0 0 chr2 51292111 51292148 -201964435 + AT_rich Low_complexity Low_complexity 1 37 0 28 0 0 0 chr2 51292383 51292411 -201964172 + AT_rich Low_complexity Low_complexity 1 28 0 1128 124 83 0 chr2 51294443 51294660 -201961923 + L1MA9 LINE L1 6078 6312 0 242 243 146 42 chr2 51294662 51294806 -201961777 - L3 LINE CR1 -16 1561 1403 206 366 15 53 chr2 51296232 51296363 -201960220 + L2 LINE L2 3142 3267 -5 371 267 121 42 chr2 51296482 51296647 -201959936 - MER5B DNA MER1_type 0 178 1 1317 214 40 56 chr2 51297078 51297365 -201959218 + L1MD3 LINE L1 6737 7018 -977 1792 203 3 22 chr2 51297365 51297735 -201958848 + MLT1A1 LTR MaLR 3 365 0 1317 214 40 56 chr2 51297735 51297821 -201958762 + L1MD3 LINE L1 7018 7104 -891 287 283 11 11 chr2 51297821 51297913 -201958670 + MLT1F1 LTR MaLR 24 115 -452 6199 73 42 11 chr2 51297925 51299548 -201957035 + L1PA7 LINE L1 4505 6154 0 266 348 154 27 chr2 51299568 51300235 -201956348 - L2 LINE L2 -630 2684 1933 205 359 48 0 chr2 51300601 51300704 -201955879 + MIR SINE MIR 31 138 -70 2507 65 0 0 chr2 51303491 51303799 -201952784 - AluY SINE Alu -3 308 1 418 359 0 8 chr2 51303949 51304080 -201952503 + MER5A DNA MER1_type 4 133 -56 2351 103 0 3 chr2 51305170 51305480 -201951103 + AluY SINE Alu 3 311 0 612 223 25 64 chr2 51305845 51306002 -201950581 + MER58A DNA MER1_type 25 175 -49 231 222 28 83 chr2 51306013 51306057 -201950526 + MER58B DNA MER1_type 268 308 -2112 2255 136 8 8 chr2 51306057 51306411 -201950172 - THE1A LTR MaLR 0 355 2 231 222 28 83 chr2 51306411 51306438 -201950145 + MER58B DNA MER1_type 308 335 -6 594 331 54 11 chr2 51306442 51306983 -201949600 - ERVL LTR ERVL -2106 2927 2267 729 317 125 62 chr2 51307022 51307424 -201949159 + L1M3d LINE L1 418 665 -5638 411 68 0 0 chr2 51307424 51307483 -201949100 + (CA)n Simple_repeat Simple_repeat 1 59 0 729 317 125 62 chr2 51307483 51307915 -201948668 + L1M3d LINE L1 665 1068 -5235 2080 149 16 16 chr2 51308075 51308450 -201948133 - THE1C LTR MaLR 0 375 1 9634 135 35 12 chr2 51308455 51309994 -201946589 - THE1C-int LTR MaLR -6 1574 1 1764 190 35 16 chr2 51309994 51310362 -201946221 - THE1C LTR MaLR 0 375 1 4773 255 55 24 chr2 51310366 51313486 -201943097 + L1M3 LINE L1 777 3982 -2400 1834 167 33 13 chr2 51313488 51313817 -201942766 + MER2 DNA MER2_type 2 342 -3 1990 157 31 22 chr2 51313819 51314233 -201942350 + L1M3 LINE L1 3981 4398 -1984 2025 189 17 8 chr2 51314301 51314952 -201941631 + L1M3 LINE L1 5255 5909 -495 1020 158 46 62 chr2 51314952 51315116 -201941467 + L1MA3 LINE L1 17 177 -7388 2270 91 0 13 chr2 51315116 51315424 -201941159 + AluY SINE Alu 1 304 -7 1020 158 46 62 chr2 51315424 51315499 -201941084 + L1MA3 LINE L1 177 252 -7313 14002 181 22 15 chr2 51315499 51316922 -201939661 + L1MA3 LINE L1 1681 3093 -4472 3539 172 5 64 chr2 51316922 51317656 -201938927 + LTR8 LTR ERV1 1 691 0 14002 181 22 15 chr2 51317656 51319268 -201937315 + L1MA3 LINE L1 3093 4693 -2872 1444 235 7 0 chr2 51319268 51319562 -201937021 + AluJb SINE Alu 1 296 -16 14002 181 22 15 chr2 51319562 51321563 -201935020 + L1MA3 LINE L1 4693 6751 -814 2974 89 16 33 chr2 51321567 51322018 -201934565 - MLT2A1 LTR ERVL 0 444 2 14650 79 16 4 chr2 51322020 51323949 -201932634 - HERVL-A1 LTR ERVL 0 5654 3703 6417 71 2 5 chr2 51323950 51324812 -201931771 - L1P LINE L1 -2570 3576 2715 6857 63 8 1 chr2 51324812 51326061 -201930522 + L1PA4 LINE L1 4901 6155 0 6417 71 2 5 chr2 51326061 51326083 -201930500 - L1P LINE L1 -3431 2715 2694 4206 85 2 0 chr2 51326064 51326607 -201929976 - HERVL-A1 LTR ERVL -1938 3716 3173 * 9188 81 11 1 chr2 51326597 51327790 -201928793 - HERVL-A1 LTR ERVL -4449 1205 1 2789 95 82 5 chr2 51327790 51328202 -201928381 - MLT2A1 LTR ERVL 0 444 1 4309 128 10 0 chr2 51328208 51328886 -201927697 + L1MA3 LINE L1 6757 7441 -283 482 336 58 12 chr2 51329028 51329269 -201927314 - ERVL LTR ERVL -3498 2266 2015 723 300 81 21 chr2 51329547 51330263 -201926320 - L1M4 LINE L1 -2284 3862 3104 728 291 102 45 chr2 51331603 51332025 -201924558 + MLT1J LTR MaLR 3 448 -63 2631 110 5 5 chr2 51332174 51332548 -201924035 - THE1C LTR MaLR 0 375 2 556 301 72 5 chr2 51334489 51334682 -201921901 - MIR SINE MIR 0 262 57 21 0 0 0 chr2 51334791 51334812 -201921771 + AT_rich Low_complexity Low_complexity 1 21 0 219 328 258 0 chr2 51335603 51335731 -201920852 - L2 LINE L2 0 3272 3112 704 281 66 29 chr2 51336010 51336252 -201920331 - MIR SINE MIR 0 262 12 691 289 78 12 chr2 51336408 51336650 -201919933 + MIR SINE MIR 4 261 -1 181 344 16 0 chr2 51336923 51336987 -201919596 - MIR SINE MIR -102 106 42 188 296 0 56 chr2 51337193 51337264 -201919319 + MIR SINE MIR 59 125 -137 342 291 41 41 chr2 51338534 51338698 -201917885 - MIR3 SINE MIR -23 185 21 1497 198 88 42 chr2 51341078 51341431 -201915152 - MER93b LTR ERV1 0 373 5 183 409 66 57 chr2 51342143 51342461 -201914122 - L2 LINE L2 -9 3263 2943 273 197 0 0 chr2 51345398 51345459 -201911124 + CT-rich Low_complexity Low_complexity 2 62 0 429 304 7 14 chr2 51347624 51347762 -201908821 + MIR SINE MIR 122 258 -4 24 32 0 0 chr2 51347805 51347836 -201908747 + AT_rich Low_complexity Low_complexity 1 31 0 444 299 70 6 chr2 51347843 51348000 -201908583 + MIR3 SINE MIR 37 203 -5 234 0 0 0 chr2 51348170 51348196 -201908387 + (A)n Simple_repeat Simple_repeat 1 26 0 6328 135 40 2 chr2 51349923 51351259 -201905324 - L1MA3 LINE L1 0 6305 4919 263 303 7 39 chr2 51351411 51351566 -201905017 + HAL1 LINE L1 1219 1368 -1139 478 315 71 25 chr2 51351568 51351806 -201904777 - MIR SINE MIR 0 262 14 2783 3 0 3 chr2 51352094 51352398 -201904185 - AluYa5 SINE Alu -8 303 1 272 309 27 20 chr2 51353003 51353152 -201903431 + HAL1b LINE L1 749 898 -450 23 0 0 0 chr2 51355164 51355187 -201901396 + AT_rich Low_complexity Low_complexity 1 23 0 2081 125 0 0 chr2 51355189 51355477 -201901106 + AluSx SINE Alu 1 288 -24 301 305 0 0 chr2 51355482 51355564 -201901019 + L1MC4 LINE L1 6614 6695 -1347 273 119 0 0 chr2 51355564 51355606 -201900977 + (TG)n Simple_repeat Simple_repeat 2 43 0 24 32 0 0 chr2 51356569 51356600 -201899983 + AT_rich Low_complexity Low_complexity 1 31 0 261 305 74 64 chr2 51356846 51357049 -201899534 - L2 LINE L2 -208 3064 2860 3975 116 49 92 chr2 51357444 51358264 -201898319 - LTR1 LTR ERV1 0 785 1 1974 179 17 8 chr2 51359083 51359436 -201897147 + MLT1A1 LTR MaLR 10 365 0 444 337 58 11 chr2 51359474 51359664 -201896919 - L2 LINE L2 -234 3079 2881 210 37 0 0 chr2 51359802 51359829 -201896754 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 2136 158 42 42 chr2 51360432 51360535 -201896048 - Tigger2a DNA MER2_type -2282 426 324 3345 80 30 0 chr2 51360535 51360975 -201895608 + MLT2A2 LTR ERVL 1 453 0 2136 158 42 42 chr2 51360975 51361296 -201895287 - Tigger2a DNA MER2_type -2383 325 2 324 0 0 0 chr2 51361297 51361333 -201895250 + (TG)n Simple_repeat Simple_repeat 1 36 0 22 70 0 0 chr2 51361343 51361386 -201895197 + AT_rich Low_complexity Low_complexity 1 43 0 243 271 241 48 chr2 51361433 51361599 -201894984 - MIR SINE MIR -1 261 64 216 238 0 0 chr2 51361709 51361772 -201894811 + GA-rich Low_complexity Low_complexity 1 63 0 241 189 38 0 chr2 51361861 51361914 -201894669 + L2 LINE L2 3217 3271 -1 995 200 82 95 chr2 51363204 51363594 -201892989 - MLT1B LTR MaLR -4 386 2 860 213 0 0 chr2 51363850 51364024 -201892559 + L1P LINE L1 4929 5102 -1044 250 267 19 86 chr2 51364025 51364130 -201892453 + MIR SINE MIR 63 160 -102 906 200 94 0 chr2 51364162 51364332 -201892251 + MER21B LTR ERV1 309 494 -369 1716 184 0 17 chr2 51364354 51364647 -201891936 + AluJb SINE Alu 1 288 -24 399 342 26 8 chr2 51365322 51365439 -201891144 - L2 LINE L2 -20 3252 3134 515 293 147 0 chr2 51366195 51366420 -201890163 - MIR SINE MIR 0 262 5 387 0 0 0 chr2 51366478 51366521 -201890062 + (TTA)n Simple_repeat Simple_repeat 3 45 0 6724 70 13 0 chr2 51366521 51367969 -201888614 - L1PA6 LINE L1 -18 6136 4680 2524 246 51 25 chr2 51368146 51368994 -201887589 + L1ME1 LINE L1 5302 6331 -3 519 60 0 0 chr2 51369763 51369830 -201886753 + (TATATG)n Simple_repeat Simple_repeat 3 69 0 207 280 0 0 chr2 51370164 51370214 -201886369 + (CATATA)n Simple_repeat Simple_repeat 5 54 0 1134 167 14 19 chr2 51371324 51371540 -201885043 + L1PB3 LINE L1 5937 6151 -3 202 182 0 0 chr2 51371540 51371573 -201885010 + (TG)n Simple_repeat Simple_repeat 2 34 0 1680 174 130 21 chr2 51371743 51372128 -201884455 + MSTA LTR MaLR 1 427 -1 9414 141 12 33 chr2 51372131 51373742 -201882841 + MSTA-int LTR MaLR 3 1579 -1 1631 161 128 36 chr2 51373743 51374135 -201882448 + MSTA LTR MaLR 1 428 0 1766 133 6 81 chr2 51374248 51374571 -201882012 + AluSx SINE Alu 1 299 -13 570 256 39 0 chr2 51374695 51374851 -201881732 + L1MB7 LINE L1 6000 6161 -23 567 282 161 10 chr2 51374961 51375266 -201881317 - L1MDb LINE L1 -5284 1125 775 22 0 0 0 chr2 51376284 51376306 -201880277 + AT_rich Low_complexity Low_complexity 1 22 0 1520 212 116 8 chr2 51376358 51376712 -201879871 + MSTD LTR MaLR 5 396 0 280 305 61 30 chr2 51379307 51379438 -201877145 + L2 LINE L2 3169 3303 -10 211 200 0 0 chr2 51379480 51379525 -201877058 + (TGGA)n Simple_repeat Simple_repeat 4 48 0 384 291 24 24 chr2 51379526 51379653 -201876930 - MIR3 SINE MIR -8 200 74 597 274 25 66 chr2 51380262 51380459 -201876124 - MER91A DNA MER1_type 0 196 8 221 242 65 0 chr2 51380468 51380530 -201876053 - MIR SINE MIR -98 164 99 212 122 24 0 chr2 51380671 51380712 -201875871 + CT-rich Low_complexity Low_complexity 2 43 0 369 247 34 0 chr2 51381885 51381974 -201874609 - MER5A DNA MER1_type -80 109 18 264 30 0 0 chr2 51383100 51383133 -201873450 + (CA)n Simple_repeat Simple_repeat 2 34 0 343 368 98 15 chr2 51383422 51383626 -201872957 - L3b LINE CR1 -5 1578 1358 22 35 0 0 chr2 51383728 51383757 -201872826 + AT_rich Low_complexity Low_complexity 1 29 0 30 0 0 0 chr2 51384692 51384722 -201871861 + AT_rich Low_complexity Low_complexity 1 30 0 2309 93 0 0 chr2 51384784 51385094 -201871489 - AluY SINE Alu -1 310 1 484 250 36 18 chr2 51385940 51386052 -201870531 + L2 LINE L2 3155 3268 -4 289 341 12 0 chr2 51387153 51387238 -201869345 - L2 LINE L2 -1 3312 3227 1892 140 14 0 chr2 51388861 51389154 -201867429 + AluSg SINE Alu 1 297 -13 21 0 0 0 chr2 51389180 51389201 -201867382 + AT_rich Low_complexity Low_complexity 1 21 0 203 175 25 0 chr2 51389346 51389386 -201867197 + CT-rich Low_complexity Low_complexity 2 42 0 29 84 0 0 chr2 51389680 51389751 -201866832 + AT_rich Low_complexity Low_complexity 1 71 0 460 303 0 8 chr2 51389893 51390012 -201866571 + L2 LINE L2 3196 3313 0 3781 118 64 26 chr2 51390201 51391281 -201865302 + MER11A LTR ERVK 1 1232 -4 320 245 118 10 chr2 51391309 51391411 -201865172 - MIR SINE MIR -65 197 85 1304 150 19 9 chr2 51391580 51391793 -201864790 + AluSg/x SINE Alu 89 303 -9 24 32 0 0 chr2 51393045 51393076 -201863507 + AT_rich Low_complexity Low_complexity 1 31 0 1990 286 161 30 chr2 51393208 51394254 -201862329 - L2 LINE L2 -1335 1979 797 782 285 14 67 chr2 51394259 51394617 -201861966 + L2 LINE L2 2968 3306 -7 245 114 0 0 chr2 51395835 51395870 -201860713 + MIR SINE MIR 110 144 -64 2258 102 0 16 chr2 51396599 51396913 -201859670 + AluSg SINE Alu 1 309 -1 494 256 51 26 chr2 51398328 51398484 -201858099 - MLT1I LTR MaLR -1 408 249 184 361 76 17 chr2 51399325 51399444 -201857139 + L2 LINE L2 3137 3262 -10 298 273 157 47 chr2 51399651 51399823 -201856760 + MIR SINE MIR 1 191 -71 311 260 140 85 chr2 51400571 51400771 -201855812 + MIR SINE MIR 23 233 -29 1813 199 16 110 chr2 51401005 51401202 -201855381 + MLT1D LTR MaLR 12 226 -279 2169 117 10 0 chr2 51401202 51401501 -201855082 + AluSq SINE Alu 1 302 -11 1813 199 16 110 chr2 51401501 51401847 -201854736 + MLT1D LTR MaLR 226 504 -1 258 32 0 0 chr2 51403492 51403523 -201853060 + (TC)n Simple_repeat Simple_repeat 2 32 0 346 188 21 62 chr2 51403523 51403619 -201852964 - L1MC4 LINE L1 -1337 6705 6614 200 35 35 0 chr2 51403755 51403784 -201852799 + (TG)n Simple_repeat Simple_repeat 1 30 0 317 313 62 16 chr2 51404142 51404270 -201852313 - MER94 DNA DNA 0 134 1 445 347 34 0 chr2 51404516 51404692 -201851891 + MIR SINE MIR 73 254 -8 506 209 234 0 chr2 51404824 51404982 -201851601 + MIR SINE MIR 65 259 -3 1061 292 174 35 chr2 51406673 51407364 -201849219 + L2 LINE L2 2352 3186 -127 2439 75 0 0 chr2 51407364 51407670 -201848913 - AluY SINE Alu -5 306 1 1061 292 174 35 chr2 51407670 51407819 -201848764 + L2 LINE L2 3186 3313 0 488 213 90 25 chr2 51409473 51409595 -201846988 - MIR SINE MIR -68 194 65 569 308 37 53 chr2 51410949 51411248 -201845335 - LTR16A1 LTR ERVL 0 457 164 1333 299 89 44 chr2 51411556 51412422 -201844161 - L2 LINE L2 0 3313 2410 650 312 188 16 chr2 51413284 51413774 -201842809 + L2 LINE L2 1202 1775 -1539 5196 136 16 0 chr2 51413778 51414789 -201841794 - L1PA15 LINE L1 -5 6160 5152 446 169 2 0 chr2 51414789 51414892 -201841691 + L1 LINE L1 4966 5069 -1077 339 331 151 18 chr2 51414892 51415224 -201841359 + L2 LINE L2 1787 2162 -1152 2721 171 54 78 chr2 51416704 51417412 -201839171 + LTR8 LTR ERV1 1 691 0 450 229 62 35 chr2 51417499 51417643 -201838940 - Charlie8 DNA MER1_type -2160 257 110 7843 10 0 0 chr2 51417727 51418989 -201837594 - L1PA2 LINE L1 -2 6153 4892 180 0 0 0 chr2 51419278 51419298 -201837285 + (T)n Simple_repeat Simple_repeat 1 20 0 882 236 6 6 chr2 51419304 51419478 -201837105 - MER58A DNA MER1_type -48 176 3 5932 192 24 8 chr2 51424893 51427118 -201829465 - L1PA16 LINE L1 -10 6156 3903 195 300 175 0 chr2 51428493 51428573 -201828010 + MIR SINE MIR 53 146 -116 2450 218 116 32 chr2 51428998 51429878 -201826705 + L1MC4a LINE L1 6855 7808 0 451 249 33 55 chr2 51429983 51430164 -201826419 + MER69A DNA AcHobo 1 177 0 684 215 0 0 chr2 51432508 51432629 -201823954 - FLAM_C SINE Alu -11 132 12 2200 108 0 16 chr2 51432649 51432964 -201823619 - AluSg SINE Alu 0 310 1 483 275 86 74 chr2 51433745 51433989 -201822594 + MIR SINE MIR 1 247 -15 204 150 0 25 chr2 51436248 51436288 -201820295 + (TTTTC)n Simple_repeat Simple_repeat 2 40 0 21 0 0 0 chr2 51436591 51436612 -201819971 + AT_rich Low_complexity Low_complexity 1 21 0 296 189 53 32 chr2 51436705 51436800 -201819783 + GA-rich Low_complexity Low_complexity 4 100 0 285 298 149 9 chr2 51437520 51437634 -201818949 + L2 LINE L2 3184 3313 0 219 316 44 52 chr2 51437657 51437793 -201818790 + L2 LINE L2 2918 3052 -220 3000 104 28 0 chr2 51438022 51438454 -201818129 + MLT2A1 LTR ERVL 1 444 0 1343 171 87 78 chr2 51438936 51439269 -201817314 + MLT1B LTR MaLR 54 389 -1 487 213 139 0 chr2 51439282 51439404 -201817179 + MIR SINE MIR 124 262 0 260 291 43 50 chr2 51440370 51440511 -201816072 + MIR SINE MIR 67 206 -56 181 196 0 43 chr2 51441058 51441104 -201815479 + MIR SINE MIR 102 145 -117 299 286 8 16 chr2 51441631 51441757 -201814826 - MER110 LTR ERV1 -14 477 353 8052 224 44 62 chr2 51442402 51446967 -201809616 - L1PA12 LINE L1 -4150 3434 1 1357 186 29 7 chr2 51446976 51447250 -201809333 - THE1-int LTR MaLR -303 1277 998 3125 185 6 24 chr2 51447251 51447911 -201808672 - MSTB-int LTR MaLR -1003 648 1 2434 176 9 9 chr2 51447911 51448337 -201808246 - MSTB LTR MaLR 0 426 1 1669 236 60 10 chr2 51448338 51448741 -201807842 + MER21B LTR ERV1 428 850 -13 2843 16 0 0 chr2 51449020 51449333 -201807250 + AluYb8 SINE Alu 1 313 -5 984 230 84 50 chr2 51449662 51449991 -201806592 + MSTD LTR MaLR 1 346 -50 238 26 51 0 chr2 51449991 51450030 -201806553 + (TTTG)n Simple_repeat Simple_repeat 4 44 0 984 230 84 50 chr2 51450030 51450083 -201806500 + MSTD LTR MaLR 346 396 0 1992 99 0 4 chr2 51500448 51500711 -201755872 + AluSq SINE Alu 32 293 -20 295 49 98 0 chr2 51500711 51500752 -201755831 - MSTC LTR MaLR -383 45 1 394 211 171 49 chr2 51500753 51500999 -201755584 + HAL1 LINE L1 712 987 -1520 501 256 137 30 chr2 51500999 51501023 -201755560 + L1M4 LINE L1 4739 4759 -1387 2177 109 3 3 chr2 51501023 51501317 -201755266 + AluSq SINE Alu 1 294 -19 501 256 137 30 chr2 51501317 51501562 -201755021 + L1M4 LINE L1 4759 5037 -1109 635 179 0 0 chr2 51501564 51501670 -201754913 + AluJb SINE Alu 3 108 -204 419 252 52 0 chr2 51501790 51501905 -201754678 + L1MB7 LINE L1 5932 6052 -132 1010 158 0 29 chr2 51501905 51502076 -201754507 - FRAM SINE Alu -13 163 1 325 103 0 206 chr2 51502076 51502173 -201754410 + L1MB7 LINE L1 6051 6127 -51 807 150 71 0 chr2 51502183 51502323 -201754260 + AluJo SINE Alu 1 150 -162 275 241 0 0 chr2 51502324 51502382 -201754201 - L1M4 LINE L1 -3310 2836 2779 796 156 6 83 chr2 51502382 51502562 -201754021 + MLT1E2 LTR MaLR 1 166 -460 2310 107 3 0 chr2 51502576 51502884 -201753699 + AluSp SINE Alu 2 310 -3 540 188 8 0 chr2 51502983 51503100 -201753483 - L1MB7 LINE L1 -9 6175 6058 1475 172 4 11 chr2 51503348 51503615 -201752968 + AluJo SINE Alu 10 274 -38 498 17 0 0 chr2 51503617 51503676 -201752907 + (TC)n Simple_repeat Simple_repeat 2 60 0 315 0 0 0 chr2 51503675 51503710 -201752873 + (TG)n Simple_repeat Simple_repeat 2 36 0 * 225 0 0 0 chr2 51503709 51503734 -201752849 + (TA)n Simple_repeat Simple_repeat 2 26 0 * 2397 62 13 3 chr2 51503815 51504123 -201752460 - AluY SINE Alu 0 311 1 2237 98 0 3 chr2 51504374 51504671 -201751912 - AluSx SINE Alu -16 296 1 1697 221 90 61 chr2 51506072 51506402 -201750181 - MLT1E1 LTR MaLR -77 577 223 737 212 6 29 chr2 51506402 51506572 -201750011 - FRAM SINE Alu 0 166 1 1697 221 90 61 chr2 51506572 51506797 -201749786 - MLT1E1 LTR MaLR -431 223 6 1690 141 3 56 chr2 51507066 51507385 -201749198 + AluSg SINE Alu 1 302 -8 413 249 11 81 chr2 51508421 51508653 -201747930 + MLT1J LTR MaLR 36 210 -199 425 202 25 34 chr2 51508728 51508847 -201747736 + MLT1J LTR MaLR 392 509 -2 355 329 148 7 chr2 51510995 51511150 -201745433 + MER5A DNA MER1_type 7 183 -6 1876 190 21 4 chr2 51511254 51511832 -201744751 - L1MA9 LINE L1 -693 5619 5031 2272 221 66 24 chr2 51511843 51511994 -201744589 + L1MA9 LINE L1 5628 5771 -541 222 37 0 0 chr2 51511994 51512021 -201744562 + (CA)n Simple_repeat Simple_repeat 2 28 0 2272 221 66 24 chr2 51512021 51512490 -201744093 + L1MA9 LINE L1 5771 6274 -38 382 237 44 22 chr2 51512541 51512676 -201743907 + L1MEd LINE L1 969 1106 -5013 916 73 0 29 chr2 51513132 51513269 -201743314 - L1PA13 LINE L1 -5 6158 6026 2038 130 10 0 chr2 51513881 51514173 -201742410 + AluSx SINE Alu 1 295 -17 312 143 0 0 chr2 51514191 51514247 -201742336 + (TA)n Simple_repeat Simple_repeat 1 56 0 333 286 0 0 chr2 51514248 51514332 -201742251 + L1MC4 LINE L1 6614 6697 -1345 231 130 0 0 chr2 51514332 51514378 -201742205 - LTR66 LTR ERVL -171 439 394 221 354 46 77 chr2 51516378 51516508 -201740075 - L2 LINE L2 -9 3263 3138 597 192 58 13 chr2 51516527 51516683 -201739900 + MER104 DNA Tc2 14 176 -4 635 209 106 70 chr2 51517856 51517897 -201738686 + LTR50 LTR ERVL 4 42 -753 2024 150 3 3 chr2 51517897 51518204 -201738379 - AluJo SINE Alu -5 307 1 635 209 106 70 chr2 51518204 51518435 -201738148 + LTR50 LTR ERVL 42 286 -509 508 249 104 52 chr2 51518456 51518725 -201737858 + LTR50 LTR ERVL 511 793 -2 311 70 0 0 chr2 51519750 51519793 -201736790 - MADE1 DNA Mariner -34 46 4 21 36 0 0 chr2 51520013 51520041 -201736542 + AT_rich Low_complexity Low_complexity 1 28 0 281 309 41 21 chr2 51520072 51520169 -201736414 + L2 LINE L2 3172 3270 -2 219 299 120 33 chr2 51520163 51520347 -201736236 - L2 LINE L2 -712 2602 2403 * 2097 102 0 3 chr2 51520361 51520687 -201735896 + AluSx SINE Alu 1 325 0 290 115 98 0 chr2 51521332 51521393 -201735190 + L1MA4 LINE L1 5961 6027 -273 936 157 12 0 chr2 51521593 51521759 -201734824 + L1MA4A LINE L1 6136 6303 0 1829 262 131 15 chr2 51522591 51523248 -201733335 + Zaphod DNA AcHobo 1 733 -3298 3404 192 55 3 chr2 51523251 51523965 -201732618 + L1MA9 LINE L1 5509 6259 -53 469 220 62 49 chr2 51523965 51524201 -201732382 + Zaphod DNA AcHobo 713 955 -3076 2362 75 0 0 chr2 51524201 51524494 -201732089 - AluY SINE Alu -18 293 1 469 220 62 49 chr2 51524494 51524561 -201732022 + Zaphod DNA AcHobo 955 1020 -3011 * 684 183 82 60 chr2 51524532 51524800 -201731783 + Zaphod DNA AcHobo 3607 3880 -151 3959 195 17 10 chr2 51524801 51524913 -201731670 + L1P4 LINE L1 4454 4564 -1602 2092 116 65 8 chr2 51524913 51525268 -201731315 + THE1C LTR MaLR 1 375 0 3959 195 17 10 chr2 51525268 51526488 -201730095 + L1P4 LINE L1 4564 5789 -377 1471 167 4 4 chr2 51526588 51526816 -201729767 - MER1B DNA MER1_type -63 234 7 22 0 0 0 chr2 51527172 51527194 -201729389 + AT_rich Low_complexity Low_complexity 1 22 0 293 239 78 99 chr2 51527889 51528031 -201728552 + L2 LINE L2 3158 3296 -17 228 184 0 0 chr2 51528840 51528889 -201727694 + (CA)n Simple_repeat Simple_repeat 2 50 0 4217 198 59 25 chr2 51529306 51530769 -201725814 - L1MD1 LINE L1 0 6242 4740 4491 80 12 0 chr2 51532179 51532782 -201723801 - L1PA8A LINE L1 -27 6104 5495 2214 67 3 11 chr2 51533108 51533391 -201723192 - AluSg SINE Alu -23 287 7 264 272 132 37 chr2 51533450 51533586 -201722997 + L2 LINE L2 3165 3313 0 198 335 114 13 chr2 51533687 51533845 -201722738 + L2 LINE L2 2566 2739 -575 613 208 0 0 chr2 51534097 51534217 -201722366 - AluSg/x SINE Alu 0 310 191 1948 111 3 68 chr2 51534267 51534592 -201721991 - AluSc SINE Alu -5 304 1 466 290 35 24 chr2 51534769 51534938 -201721645 + L2 LINE L2 3143 3313 0 197 342 53 9 chr2 51535240 51535354 -201721229 - L2 LINE L2 -2270 1044 926 3612 108 0 6 chr2 51535674 51536185 -201720398 - MER9 LTR ERVK 0 511 4 294 233 0 0 chr2 51536718 51536778 -201719805 - MLT1I LTR MaLR -10 399 340 748 217 60 12 chr2 51536778 51536944 -201719639 - MER58A DNA MER1_type -3 221 48 661 330 78 26 chr2 51536970 51537276 -201719307 - MLT1I LTR MaLR -75 334 13 21 57 0 0 chr2 51537746 51537781 -201718802 + AT_rich Low_complexity Low_complexity 1 35 0 1879 217 39 52 chr2 51538441 51539070 -201717513 - L1M LINE L1 -771 5375 4797 4147 149 14 31 chr2 51539072 51539493 -201717090 + L1PB4 LINE L1 5387 5791 -365 306 0 0 0 chr2 51539493 51539527 -201717056 + (CA)n Simple_repeat Simple_repeat 2 35 0 4147 149 14 31 chr2 51539527 51539885 -201716698 + L1PB4 LINE L1 5791 6153 -3 244 286 200 0 chr2 51540870 51540975 -201715608 + LTR50 LTR ERVL 144 269 -526 402 291 98 43 chr2 51541324 51541578 -201715005 - L1ME4a LINE L1 -206 5915 5648 432 0 0 0 chr2 51541806 51541854 -201714729 + (TA)n Simple_repeat Simple_repeat 2 49 0 568 310 88 13 chr2 51542776 51543002 -201713581 - MIR SINE MIR 0 262 20 21 0 0 0 chr2 51543010 51543031 -201713552 + AT_rich Low_complexity Low_complexity 1 21 0 255 229 21 21 chr2 51543390 51543486 -201713097 + (TA)n Simple_repeat Simple_repeat 2 97 0 525 264 108 84 chr2 51545085 51545234 -201711349 - MLT1H1 LTR MaLR -190 400 256 2184 135 3 0 chr2 51545234 51545545 -201711038 + AluSx SINE Alu 1 312 0 525 264 108 84 chr2 51545545 51545778 -201710805 - MLT1H1 LTR MaLR -334 256 6 249 33 0 0 chr2 51545812 51545842 -201710741 + (TG)n Simple_repeat Simple_repeat 2 31 0 * 288 0 0 0 chr2 51545841 51545873 -201710710 + (TA)n Simple_repeat Simple_repeat 1 32 0 271 114 171 14 chr2 51547817 51547887 -201708696 + L1PA16 LINE L1 6077 6157 -9 27 62 0 0 chr2 51548733 51548781 -201707802 + AT_rich Low_complexity Low_complexity 1 48 0 249 304 55 9 chr2 51548803 51548915 -201707668 - MIR SINE MIR -63 145 42 3467 45 4 58 chr2 51549544 51550031 -201706552 + L1PA7 LINE L1 5690 6150 -4 245 284 275 17 chr2 51551263 51551421 -201705162 - MIR SINE MIR -61 201 2 292 276 80 12 chr2 51551705 51551868 -201704715 - L1ME LINE L1 -273 5848 5675 317 313 36 0 chr2 51551879 51551991 -201704592 - L1ME LINE L1 -489 5632 5517 364 306 93 43 chr2 51552565 51552688 -201703895 - L1ME3 LINE L1 -256 5906 5791 2308 113 3 0 chr2 51552688 51552998 -201703585 + AluSq SINE Alu 3 313 0 364 306 93 43 chr2 51552998 51553152 -201703431 - L1ME3 LINE L1 -371 5791 5615 3121 92 2 0 chr2 51554228 51554662 -201701921 + L1PA10 LINE L1 5723 6157 -11 590 318 108 5 chr2 51555850 51556073 -201700510 + MIR SINE MIR 1 246 -16 187 333 152 18 chr2 51556806 51556977 -201699606 + L2 LINE L2 2866 3059 -213 228 285 42 109 chr2 51557111 51557304 -201699279 - MIR SINE MIR -71 191 12 290 307 168 15 chr2 51557310 51557447 -201699136 - MER5A DNA MER1_type -2 187 30 239 274 27 14 chr2 51557387 51557460 -201699123 + MER5A DNA MER1_type 110 183 -6 * 297 267 48 48 chr2 51557520 51557625 -201698958 + L2 LINE L2 3201 3305 -8 391 377 66 12 chr2 51558549 51558976 -201697607 + HAL1 LINE L1 12 461 -2046 22 35 0 0 chr2 51560040 51560069 -201696514 + AT_rich Low_complexity Low_complexity 1 29 0 778 346 77 12 chr2 51560764 51561272 -201695311 - MER89-int LTR ERV1 -156 6645 6105 770 227 0 7 chr2 51561544 51561698 -201694885 - LTR32 LTR ERVL -2 469 317 1233 246 84 0 chr2 51562078 51562387 -201694196 - LTR32 LTR ERVL -122 349 15 1946 155 30 0 chr2 51562479 51562782 -201693801 - AluSx SINE Alu 0 312 1 274 62 62 0 chr2 51562829 51562877 -201693706 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 270 165 138 83 chr2 51562879 51562966 -201693617 - MLT1F1 LTR MaLR -246 296 211 608 224 90 86 chr2 51562966 51563382 -201693201 - MLT1F1-int LTR MaLR -828 543 2 1293 251 76 67 chr2 51563444 51563981 -201692602 - MLT1F1 LTR MaLR 0 567 1 1093 161 38 9 chr2 51564573 51564784 -201691799 - Tigger1 DNA MER2_type 0 2418 2202 207 0 0 0 chr2 51564817 51564840 -201691743 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 864 173 7 0 chr2 51564840 51564979 -201691604 - FRAM SINE Alu -29 147 8 3637 161 86 51 chr2 51564980 51565513 -201691070 - Tigger1 DNA MER2_type -1621 797 284 2420 78 0 3 chr2 51565513 51565822 -201690761 + AluY SINE Alu 1 308 -3 3637 161 86 51 chr2 51565822 51565850 -201690733 - Tigger1 DNA MER2_type -2134 284 258 252 0 0 0 chr2 51565850 51565878 -201690705 + (TAA)n Simple_repeat Simple_repeat 3 30 0 3637 161 86 51 chr2 51565878 51566085 -201690498 - Tigger1 DNA MER2_type -2160 258 1 653 281 26 13 chr2 51566218 51566446 -201690137 + MIR SINE MIR 31 261 -1 2243 114 0 9 chr2 51567968 51568283 -201688300 + AluSx SINE Alu 1 312 0 219 265 147 88 chr2 51568496 51568598 -201687985 + L2 LINE L2 301 408 -2906 1172 191 17 25 chr2 51568661 51568897 -201687686 - MLT1A1 LTR MaLR 0 365 132 1489 189 72 13 chr2 51568998 51569304 -201687279 - MER21B LTR ERV1 -128 735 412 1039 259 80 15 chr2 51569300 51569574 -201687009 - MER21B LTR ERV1 -560 303 12 * 462 172 8 109 chr2 51569589 51569717 -201686866 - MLT1A1 LTR MaLR -228 137 23 520 243 56 14 chr2 51569746 51569890 -201686693 - MIR SINE MIR -57 205 56 718 204 24 57 chr2 51569915 51570014 -201686569 - L1MD3 LINE L1 -6 8036 7935 1946 138 145 29 chr2 51570014 51570427 -201686156 - LOR1b LTR ERV1 0 461 1 718 204 24 57 chr2 51570427 51570593 -201685990 - L1MD3 LINE L1 -107 7935 7790 456 197 101 111 chr2 51570588 51570753 -201685830 - L1MC4 LINE L1 -335 7707 7543 * 2276 114 0 13 chr2 51570753 51571069 -201685514 - AluSx SINE Alu 0 312 1 456 197 101 111 chr2 51571069 51571101 -201685482 - L1MC4 LINE L1 -499 7543 7512 271 230 40 0 chr2 51571222 51571296 -201685287 + MER69 DNA AcHobo 2450 2526 0 2211 118 0 0 chr2 51571674 51571971 -201684612 - AluSq SINE Alu -16 297 1 245 310 23 153 chr2 51572167 51572467 -201684116 + L2 LINE L2 2926 3186 -86 598 294 61 38 chr2 51572624 51573055 -201683528 - LTR33 LTR ERVL 0 521 46 887 214 6 0 chr2 51573087 51573260 -201683323 + AluJo SINE Alu 121 294 -18 350 291 76 35 chr2 51573397 51573569 -201683014 - MIR SINE MIR -10 252 74 298 357 0 14 chr2 51574171 51574311 -201682272 + L3b LINE CR1 1127 1264 -319 908 300 122 3 chr2 51574495 51574838 -201681745 + L2 LINE L2 2567 2950 -364 2175 115 0 7 chr2 51575705 51576009 -201680574 + AluSq SINE Alu 1 302 -11 267 207 0 69 chr2 51576224 51576282 -201680301 + L2 LINE L2 3258 3311 -2 263 146 0 42 chr2 51577422 51577470 -201679113 + LTR67 LTR ERVL 499 544 -13 237 188 104 94 chr2 51577875 51577971 -201678612 + L1ME3 LINE L1 6037 6133 -29 211 172 62 0 chr2 51577980 51578044 -201678539 + GA-rich Low_complexity Low_complexity 3 70 0 269 162 44 15 chr2 51578319 51578387 -201678196 - HsTC2 DNA Tc2 -21 1877 1808 229 265 132 0 chr2 51578567 51578635 -201677948 - HsTC2 DNA Tc2 -1395 503 427 433 323 146 0 chr2 51578649 51578807 -201677776 + MER5A DNA MER1_type 9 189 0 819 300 38 33 chr2 51578811 51579178 -201677405 - HsTC2 DNA Tc2 -1485 413 45 2006 42 0 0 chr2 51579528 51579764 -201676819 - AluY SINE Alu -75 236 1 383 279 115 29 chr2 51579766 51579974 -201676609 - L2 LINE L2 -1096 2218 1993 351 169 13 13 chr2 51580194 51580271 -201676312 - MER1B DNA MER1_type -1 332 256 1034 192 28 9 chr2 51580273 51580487 -201676096 - MER1B DNA MER1_type -74 223 6 230 286 29 0 chr2 51580711 51580781 -201675802 + LTR33A LTR ERVL 452 523 0 3175 325 61 37 chr2 51580787 51580986 -201675597 - L2 LINE L2 -1327 1987 1794 2120 140 3 40 chr2 51580986 51581336 -201675247 + MER1B DNA MER1_type 1 337 0 3175 325 61 37 chr2 51581336 51582947 -201673636 - L2 LINE L2 -1520 1794 49 220 435 72 0 chr2 51583529 51583667 -201672916 - L2 LINE L2 -21 3251 3104 297 0 0 0 chr2 51584052 51584085 -201672498 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 2060 132 33 33 chr2 51584108 51584472 -201672111 - THE1B LTR MaLR 0 364 1 299 315 100 46 chr2 51585786 51586046 -201670537 - MERVL LTR ERVL -621 4864 4591 1069 163 0 6 chr2 51586304 51586482 -201670101 - L1PA8A LINE L1 0 6131 5955 25116 132 13 2 chr2 51586487 51590946 -201665637 - L1PA8A LINE L1 -431 6015 1511 4842 145 17 4 chr2 51590939 51591697 -201664886 - L1PA8A LINE L1 -5107 768 1 * 432 343 63 25 chr2 51591738 51592284 -201664299 - MERVL LTR ERVL -1269 3727 3411 331 338 7 7 chr2 51592512 51592651 -201663932 - MERVL LTR ERVL -2079 3406 3268 1360 311 49 37 chr2 51592853 51593753 -201662830 - MERVL LTR ERVL -2706 2779 1851 288 382 0 0 chr2 51593937 51594060 -201662523 - MERVL LTR ERVL -4125 1639 1517 312 356 53 12 chr2 51594591 51594838 -201661745 - MERVL LTR ERVL -4219 777 521 1574 147 76 57 chr2 51595648 51595868 -201660715 - THE1C LTR MaLR 0 375 143 2023 109 0 11 chr2 51595868 51596186 -201660397 + AluSx SINE Alu 1 315 0 1574 147 76 57 chr2 51596186 51596332 -201660251 - THE1C LTR MaLR -232 143 1 252 285 110 31 chr2 51597488 51597716 -201658867 - HAL1 LINE L1 -5 2502 2257 575 283 66 32 chr2 51598521 51598845 -201657738 - L1MC/D LINE L1 -528 5638 5321 1936 287 288 8 chr2 51598852 51600060 -201656523 + L2 LINE L2 1501 3070 -243 273 286 32 0 chr2 51600254 51600380 -201656203 - HAL1b LINE L1 -275 1073 944 213 333 40 13 chr2 51600384 51600459 -201656124 - MIR SINE MIR -102 106 30 1088 299 86 42 chr2 51600550 51601319 -201655264 - HAL1b LINE L1 -528 820 18 563 307 94 25 chr2 51601545 51601822 -201654761 + MLT1J LTR MaLR 6 301 -210 399 286 56 56 chr2 51602303 51602481 -201654102 + MIR SINE MIR 49 226 -36 21 0 0 0 chr2 51603009 51603030 -201653553 + AT_rich Low_complexity Low_complexity 1 21 0 899 251 21 41 chr2 51603186 51603429 -201653154 - MER8 DNA MER2_type 0 239 2 244 327 50 13 chr2 51603437 51603596 -201652987 - L1MC/D LINE L1 -1194 4952 4788 472 317 102 36 chr2 51603855 51603942 -201652641 - L1MC/D LINE L1 -1628 4518 4438 3602 186 22 40 chr2 51603942 51604741 -201651842 + LTR1 LTR ERV1 1 785 0 472 317 102 36 chr2 51604741 51605126 -201651457 - L1MC/D LINE L1 -1708 4438 4015 314 303 9 9 chr2 51605363 51605472 -201651111 - MIR SINE MIR -6 256 148 256 318 15 0 chr2 51605495 51605561 -201651022 - L2 LINE L2 -54 3259 3193 385 243 39 8 chr2 51605791 51605956 -201650627 - MER67A LTR ERV1 -3 540 330 1385 202 56 58 chr2 51606012 51606489 -201650094 - MER67B LTR ERV1 -253 408 1 22 0 0 0 chr2 51608904 51608926 -201647657 + AT_rich Low_complexity Low_complexity 1 22 0 298 318 27 20 chr2 51609693 51609841 -201646742 - MLT1L LTR MaLR -47 568 420 1444 246 75 82 chr2 51610871 51611567 -201645016 + L1ME2 LINE L1 3535 4225 -1921 2789 253 77 13 chr2 51611754 51613579 -201643004 + L1ME2 LINE L1 4229 6164 0 1739 189 20 12 chr2 51613602 51613946 -201642637 - MER7A DNA MER2_type 0 346 2 194 287 128 43 chr2 51614070 51614116 -201642467 - L2 LINE L2 -1817 1497 1396 194 313 0 0 chr2 51614116 51614164 -201642419 + MIR SINE MIR 95 142 -66 21 0 0 0 chr2 51614507 51614528 -201642055 + AT_rich Low_complexity Low_complexity 1 21 0 2007 128 34 55 chr2 51616212 51616268 -201640315 + THE1C LTR MaLR 1 57 -318 2535 112 0 3 chr2 51616268 51616624 -201639959 - THE1A LTR MaLR 0 355 1 2007 128 34 55 chr2 51616624 51616950 -201639633 + THE1C LTR MaLR 57 375 0 785 291 61 4 chr2 51618071 51618318 -201638265 - MIR SINE MIR 0 262 2 1452 224 3 11 chr2 51618758 51619044 -201637539 + AluJo SINE Alu 2 285 -27 24 32 0 0 chr2 51619044 51619075 -201637508 + AT_rich Low_complexity Low_complexity 1 31 0 203 80 40 40 chr2 51619593 51619611 -201636972 + A-rich Low_complexity Low_complexity 1 18 -32 2741 19 0 3 chr2 51619611 51619923 -201636660 + AluYa5 SINE Alu 1 311 0 203 80 40 40 chr2 51619923 51619954 -201636629 + A-rich Low_complexity Low_complexity 17 50 0 24 32 0 0 chr2 51620149 51620180 -201636403 + AT_rich Low_complexity Low_complexity 1 31 0 24 53 0 0 chr2 51620333 51620371 -201636212 + AT_rich Low_complexity Low_complexity 1 38 0 1906 191 79 7 chr2 51620448 51620851 -201635732 - MSTB1 LTR MaLR 0 432 1 652 278 44 31 chr2 51620851 51621078 -201635505 - MIR SINE MIR -31 231 2 2291 124 11 27 chr2 51621168 51621538 -201635045 - THE1B LTR MaLR 0 364 1 9832 112 5 94 chr2 51621538 51623272 -201633311 - THE1B-int LTR MaLR 0 1580 1 2166 132 3 62 chr2 51623272 51623419 -201633164 - THE1B LTR MaLR 0 364 210 2197 118 3 0 chr2 51623419 51623716 -201632867 - AluSg SINE Alu -12 298 1 2166 132 3 62 chr2 51623716 51623955 -201632628 - THE1B LTR MaLR -154 210 1 532 317 40 20 chr2 51624910 51625112 -201631471 + MLT1J2 LTR MaLR 31 236 -214 272 337 0 0 chr2 51625120 51625203 -201631380 - MER63 DNA MER1_type 0 1062 980 329 221 38 2 chr2 51625203 51625294 -201631289 - MER63 DNA MER1_type -309 753 660 3546 72 24 16 chr2 51626398 51626784 -201629799 - L1PA13 LINE L1 -6 6157 5765 2612 121 0 0 chr2 51626784 51627148 -201629435 + THE1B LTR MaLR 1 364 0 3546 72 24 16 chr2 51627148 51627271 -201629312 - L1PA13 LINE L1 -398 5765 5644 508 285 49 0 chr2 51627424 51627568 -201629015 - MIR SINE MIR -55 207 57 1784 173 3 6 chr2 51628112 51628424 -201628159 + AluSx SINE Alu 1 311 -1 252 264 79 79 chr2 51628455 51628595 -201627988 - MIR3 SINE MIR -67 141 2 2308 182 26 5 chr2 51629283 51629700 -201626883 - MSTB LTR MaLR 0 426 1 254 73 24 0 chr2 51630171 51630212 -201626371 + (CA)n Simple_repeat Simple_repeat 2 43 0 2535 59 0 0 chr2 51630681 51630986 -201625597 + AluY SINE Alu 1 305 -6 327 25 0 0 chr2 51631083 51631123 -201625460 + (TG)n Simple_repeat Simple_repeat 2 41 0 601 226 62 40 chr2 51631160 51631337 -201625246 + LTR52 LTR ERVL 202 382 -39 273 242 79 60 chr2 51631400 51631652 -201624931 + L1ME LINE L1 2775 3031 -3115 274 302 123 13 chr2 51632120 51632355 -201624228 + L1ME LINE L1 3509 3769 -2377 275 305 59 3 chr2 51632510 51632739 -201623844 + L1ME LINE L1 5557 5804 -358 1547 158 9 76 chr2 51632870 51633186 -201623397 + AluJo SINE Alu 2 296 -16 205 310 0 70 chr2 51633896 51633967 -201622616 - L2 LINE L2 0 3272 3207 243 296 46 28 chr2 51634400 51634508 -201622075 + L1ME LINE L1 352 461 -5935 182 328 104 0 chr2 51634806 51634873 -201621710 - L2 LINE L2 -5 3267 3194 1247 249 122 77 chr2 51635405 51635565 -201621018 + L1ME LINE L1 786 937 -5469 1337 222 54 4 chr2 51635565 51635844 -201620739 - AluJo SINE Alu -17 295 3 1247 249 122 77 chr2 51635844 51636193 -201620390 + L1ME LINE L1 937 1269 -5137 2282 123 11 6 chr2 51636193 51636551 -201620032 + L1PB3 LINE L1 5793 6152 -2 1247 249 122 77 chr2 51636551 51636961 -201619622 + L1ME LINE L1 1269 1687 -4719 2970 264 65 17 chr2 51637521 51638730 -201617853 - L1M4 LINE L1 -807 5339 4074 1042 275 130 29 chr2 51638856 51639730 -201616853 + L1ME LINE L1 2490 3452 -2954 528 329 55 44 chr2 51639731 51640205 -201616378 - L2 LINE L2 -2059 1255 710 1392 58 16 0 chr2 51640253 51640442 -201616141 + L1PA5 LINE L1 5962 6153 -1 5453 299 108 28 chr2 51640885 51642394 -201614189 - L2 LINE L2 -4 3309 1922 1900 100 0 20 chr2 51642394 51642693 -201613890 + L1PA16 LINE L1 5874 6166 0 5453 299 108 28 chr2 51642693 51643157 -201613426 - L2 LINE L2 -1391 1922 1497 1489 200 12 44 chr2 51643157 51643477 -201613106 + AluJo SINE Alu 1 310 -2 5453 299 108 28 chr2 51643477 51644494 -201612089 - L2 LINE L2 -1816 1497 76 21 0 0 0 chr2 51644695 51644716 -201611867 + AT_rich Low_complexity Low_complexity 1 21 0 1369 207 46 0 chr2 51645662 51645923 -201610660 + AluJb SINE Alu 1 273 -39 785 170 18 13 chr2 51645924 51646149 -201610434 + GA-rich Low_complexity Low_complexity 1 226 0 427 307 94 23 chr2 51646308 51646617 -201609966 - L1ME3A LINE L1 -303 5867 5537 3203 141 58 29 chr2 51647268 51647496 -201609087 + L1PA16 LINE L1 5522 5742 -424 2166 110 3 7 chr2 51647496 51647796 -201608787 + AluSx SINE Alu 1 299 -13 3203 141 58 29 chr2 51647796 51648185 -201608398 + L1PA16 LINE L1 5742 6157 -9 333 68 0 0 chr2 51648715 51648759 -201607824 + (TA)n Simple_repeat Simple_repeat 1 44 0 423 68 0 0 chr2 51648759 51648818 -201607765 + (GA)n Simple_repeat Simple_repeat 1 59 0 22 0 0 0 chr2 51649068 51649090 -201607493 + AT_rich Low_complexity Low_complexity 1 22 0 548 289 133 70 chr2 51649178 51649703 -201606880 + L1MEd LINE L1 608 1165 -4954 2247 78 0 10 chr2 51649732 51650025 -201606558 + AluSp SINE Alu 1 290 -23 2401 75 10 0 chr2 51650027 51650335 -201606248 + AluSp SINE Alu 3 313 0 231 242 67 67 chr2 51650339 51650517 -201606066 + L1P LINE L1 4871 5048 -1098 1132 122 33 11 chr2 51650745 51650925 -201605658 + AluSg/x SINE Alu 121 304 -8 365 302 143 11 chr2 51651082 51651264 -201605319 - MIR SINE MIR -51 211 6 21 0 0 0 chr2 51651286 51651307 -201605276 + AT_rich Low_complexity Low_complexity 1 21 0 427 260 87 46 chr2 51651785 51651981 -201604602 - L2 LINE L2 0 3313 3110 231 239 0 0 chr2 51653187 51653275 -201603308 + C-rich Low_complexity Low_complexity 1 88 0 205 315 174 0 chr2 51653897 51653989 -201602594 + L2 LINE L2 3163 3270 -2 1659 169 49 55 chr2 51655134 51655501 -201601082 + MLT1A1 LTR MaLR 1 365 0 577 318 47 8 chr2 51656907 51657157 -201599426 - MIR SINE MIR -2 260 6 200 322 67 56 chr2 51658420 51658510 -201598073 - MIR SINE MIR -82 126 36 1870 110 3 45 chr2 51660890 51661181 -201595402 - AluSc SINE Alu -30 279 1 23 33 0 0 chr2 51661666 51661696 -201594887 + AT_rich Low_complexity Low_complexity 1 30 0 256 234 85 21 chr2 51661747 51661841 -201594742 - LTR33 LTR ERVL -81 440 341 851 126 30 0 chr2 51662326 51662461 -201594122 + MLT1A2 LTR MaLR 1 139 -235 5976 192 99 44 chr2 51662461 51663296 -201593287 - MER52A LTR ERV1 0 1755 967 1911 147 7 3 chr2 51663296 51663589 -201592994 - AluSx SINE Alu -12 300 7 5976 192 99 44 chr2 51663589 51664337 -201592246 - MER52A LTR ERV1 -788 967 1 653 270 84 9 chr2 51664337 51664557 -201592026 + MLT1A2 LTR MaLR 134 370 -4 301 361 65 12 chr2 51665333 51665502 -201591081 + MER5A DNA MER1_type 1 178 -11 * 653 298 26 104 chr2 51665484 51665870 -201590713 + L2 LINE L2 2958 3313 0 1514 136 0 5 chr2 51667025 51667245 -201589338 - AluSq SINE Alu -94 219 1 2062 179 43 14 chr2 51667246 51667660 -201588923 - MSTA LTR MaLR -2 426 1 21 36 0 0 chr2 51667780 51667808 -201588775 + AT_rich Low_complexity Low_complexity 1 28 0 564 69 0 0 chr2 51718194 51718266 -201538317 - L1P LINE L1 -1995 4151 4080 245 143 0 0 chr2 51718266 51718308 -201538275 + LTR10C LTR ERV1 550 591 0 1358 116 23 0 chr2 51718463 51718678 -201537905 - L1PA14 LINE L1 -4 6157 5938 267 326 104 0 chr2 51718694 51718829 -201537754 - MIR SINE MIR -65 197 49 1622 230 38 5 chr2 51718880 51719250 -201537333 - MLT1E2 LTR MaLR 0 626 245 1315 127 79 9 chr2 51719471 51719700 -201536883 - L1PB4 LINE L1 -7 6149 5905 1328 191 11 80 chr2 51720022 51720384 -201536199 - MLT1A2 LTR MaLR 0 374 38 841 154 24 0 chr2 51721805 51721928 -201534655 + FLAM_C SINE Alu 1 126 -17 310 258 17 17 chr2 51721950 51722070 -201534513 + MER112 DNA MER1_type 38 157 -103 295 392 0 0 chr2 51722594 51722696 -201533887 - MIR SINE MIR -59 149 48 724 344 80 36 chr2 51722863 51723605 -201532978 - L2 LINE L2 -1325 1989 1216 6509 114 22 39 chr2 51724604 51725722 -201530861 + Tigger1 DNA MER2_type 308 1406 -1012 225 226 0 0 chr2 51727140 51727193 -201529390 + (TA)n Simple_repeat Simple_repeat 1 53 0 338 281 23 74 chr2 51727193 51727410 -201529173 + Charlie2 DNA MER1_type 113 318 -2544 500 198 6 110 chr2 51727414 51727596 -201528987 + Charlie2 DNA MER1_type 1865 2027 -835 1874 232 16 23 chr2 51727600 51728040 -201528543 + MER76 LTR ERV 1 437 -251 3142 161 17 43 chr2 51728492 51728705 -201527878 - Tigger1 DNA MER2_type -7 2411 2194 1907 166 3 13 chr2 51728705 51729018 -201527565 + AluSx SINE Alu 2 311 -1 3142 161 17 43 chr2 51729018 51729457 -201527126 - Tigger1 DNA MER2_type -224 2194 1776 568 122 11 0 chr2 51729895 51729985 -201526598 + FLAM_A SINE Alu 47 137 -5 224 300 0 0 chr2 51730125 51730175 -201526408 + MIR SINE MIR 95 144 -64 218 239 0 0 chr2 51730569 51730615 -201525968 + MIR SINE MIR 43 88 -120 979 97 7 0 chr2 51731937 51732082 -201524501 - L1PB2 LINE L1 0 6151 6006 379 327 102 15 chr2 51732183 51732449 -201524134 - L1ME4a LINE L1 -124 5997 5709 414 299 82 47 chr2 51732455 51732972 -201523611 + L2 LINE L2 2766 3308 -5 180 257 108 40 chr2 51733483 51733557 -201523026 + MIR SINE MIR 184 262 0 362 324 28 16 chr2 51733679 51733861 -201522722 - L1M4 LINE L1 -2194 3952 3769 366 224 60 0 chr2 51733872 51733988 -201522595 + L1ME4a LINE L1 5993 6115 -6 1486 154 124 0 chr2 51734355 51734614 -201521969 + AluJb SINE Alu 1 291 -21 881 294 73 75 chr2 51734812 51735506 -201521077 - L1MCc LINE L1 -5004 1419 727 239 345 53 35 chr2 51735544 51735715 -201520868 - L1MCc LINE L1 -5601 822 649 1804 159 9 6 chr2 51736128 51736449 -201520134 - L1MC1 LINE L1 -377 5956 5635 2145 125 23 47 chr2 51736451 51736835 -201519748 + THE1C LTR MaLR 1 375 0 7247 102 8 62 chr2 51736835 51738007 -201518576 + THE1C-int LTR MaLR 1 1108 -472 22 0 0 0 chr2 51739793 51739815 -201516768 + AT_rich Low_complexity Low_complexity 1 22 0 1192 208 13 32 chr2 51740945 51741253 -201515330 - L1 LINE L1 -774 5372 5071 315 0 0 0 chr2 51741393 51741428 -201515155 + (TG)n Simple_repeat Simple_repeat 2 36 0 310 274 27 0 chr2 51741526 51741599 -201514984 - MIR SINE MIR -65 143 69 2576 88 17 11 chr2 51741717 51742069 -201514514 + THE1B LTR MaLR 1 354 -10 5600 149 65 2 chr2 51742074 51742995 -201513588 + THE1B-int LTR MaLR 1 979 -601 647 74 0 11 chr2 51743594 51743689 -201512894 + (TA)n Simple_repeat Simple_repeat 2 95 0 1567 174 103 4 chr2 51744372 51744653 -201511930 - MER1B DNA MER1_type 0 339 31 279 295 170 67 chr2 51744928 51745152 -201511431 + MIR SINE MIR 6 252 -10 242 287 17 44 chr2 51746238 51746419 -201510164 + CT-rich Low_complexity Low_complexity 2 177 0 220 232 36 0 chr2 51747050 51747106 -201509477 + (CTA)n Simple_repeat Simple_repeat 1 58 0 27 0 0 0 chr2 51747667 51747694 -201508889 + AT_rich Low_complexity Low_complexity 1 27 0 492 118 0 13 chr2 51747694 51747770 -201508813 - tRNA-Glu-GAG tRNA tRNA 0 75 1 2885 30 0 3 chr2 51747776 51748138 -201508445 + L1P LINE L1 5009 5369 -777 182 37 37 0 chr2 51748258 51748285 -201508298 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 1223 263 31 31 chr2 51748414 51748829 -201507754 + LTR52 LTR ERVL 4 418 -3 316 295 129 22 chr2 51748902 51749041 -201507542 + L1M4 LINE L1 3284 3437 -2709 814 148 8 105 chr2 51749405 51749586 -201506997 - MSTB2 LTR MaLR 0 457 234 1873 165 10 0 chr2 51749586 51749883 -201506700 + AluSx SINE Alu 1 300 -12 814 148 8 105 chr2 51749883 51749903 -201506680 - MSTB2 LTR MaLR -223 234 212 468 145 12 24 chr2 51749903 51749986 -201506597 - LTR1 LTR ERV1 0 785 704 667 194 0 16 chr2 51751980 51752161 -201504422 - FLAM_A SINE Alu 0 180 2 1519 169 8 8 chr2 51753010 51753270 -201503313 - MER4E LTR ERV1 0 779 520 250 315 36 18 chr2 51753689 51753800 -201502783 + MIR SINE MIR 47 159 -103 308 328 8 8 chr2 51753894 51754022 -201502561 + MER94 DNA DNA 2 129 -5 493 359 28 42 chr2 51754711 51754998 -201501585 + LTR16C LTR ERVL 149 431 -60 1230 178 121 50 chr2 51755358 51755657 -201500926 + MSTB1 LTR MaLR 1 283 -149 1153 239 19 69 chr2 51756509 51756886 -201499697 - MLT1E1 LTR MaLR 0 654 297 337 211 14 14 chr2 51756910 51756981 -201499602 - MLT1E1 LTR MaLR -541 113 43 3258 167 41 23 chr2 51757514 51758733 -201497850 + L1PA7 LINE L1 4041 5854 -300 3258 81 0 5 chr2 51758733 51759177 -201497406 + L1PA7 LINE L1 5710 6151 -3 3258 167 41 23 chr2 51759177 51759481 -201497102 + L1PA7 LINE L1 5854 6151 -3 195 184 0 0 chr2 51759623 51759661 -201496922 + A-rich Low_complexity Low_complexity 1 38 0 2127 104 17 3 chr2 51760290 51760588 -201495995 - AluSp SINE Alu -11 302 1 654 257 38 24 chr2 51760588 51760798 -201495785 - L1MDa LINE L1 -6308 232 20 297 296 108 52 chr2 51761134 51761347 -201495236 - MLT1L LTR MaLR -85 530 306 2221 117 3 0 chr2 51762337 51762636 -201493947 - AluSg SINE Alu -7 303 4 22 0 0 0 chr2 51762657 51762679 -201493904 + AT_rich Low_complexity Low_complexity 1 22 0 1599 162 12 8 chr2 51763293 51763552 -201493031 + AluJo SINE Alu 1 260 -52 2652 340 47 23 chr2 51763754 51765380 -201491203 + ERVL LTR ERVL 1881 3559 -1977 540 332 68 77 chr2 51765489 51766242 -201490341 - L2 LINE L2 -420 2894 2149 444 260 102 0 chr2 51767261 51767388 -201489195 + L1MC/D LINE L1 5443 5582 -2226 265 327 69 0 chr2 51767619 51767720 -201488863 + MIR SINE MIR 40 147 -115 570 104 19 19 chr2 51768740 51768846 -201487737 + (TTTC)n Simple_repeat Simple_repeat 1 106 0 201 111 0 0 chr2 51768846 51768873 -201487710 + (TCCC)n Simple_repeat Simple_repeat 1 27 0 603 197 77 0 chr2 51768873 51768990 -201487593 - FLAM_A SINE Alu -6 127 2 197 302 32 0 chr2 51769092 51769155 -201487428 + MER5A DNA MER1_type 26 90 -99 1083 178 14 10 chr2 51769826 51770034 -201486549 - MER3 DNA MER1_type 0 209 1 27 0 0 0 chr2 51770609 51770636 -201485947 + AT_rich Low_complexity Low_complexity 1 27 0 1583 80 58 0 chr2 51771030 51771256 -201485327 + L1PA8 LINE L1 5926 6164 -8 2947 6 0 0 chr2 51771602 51771920 -201484663 - AluYb8 SINE Alu 0 318 1 307 308 75 54 chr2 51772554 51772889 -201483694 - L1ME LINE L1 -461 5709 5368 343 231 92 17 chr2 51772976 51773124 -201483459 - L1ME LINE L1 -3111 3035 2871 243 0 0 0 chr2 51773124 51773151 -201483432 + (TG)n Simple_repeat Simple_repeat 1 27 0 343 231 92 17 chr2 51773151 51773175 -201483408 - L1ME LINE L1 -3275 2871 2850 306 286 102 0 chr2 51773285 51773383 -201483200 + MIR SINE MIR 49 156 -106 14835 135 20 9 chr2 51773385 51775071 -201481512 - Tigger1 DNA MER2_type -1 2417 697 881 69 77 15 chr2 51775071 51775201 -201481382 + MER85 DNA T2_type 1 138 -1 14835 135 20 9 chr2 51775201 51775880 -201480703 - Tigger1 DNA MER2_type -1721 697 27 214 298 39 29 chr2 51775890 51775994 -201480589 + MIR SINE MIR 155 259 -3 331 276 74 37 chr2 51776033 51776196 -201480387 - L1MEc LINE L1 -938 6627 6459 27 49 0 0 chr2 51776196 51776237 -201480346 + AT_rich Low_complexity Low_complexity 1 41 0 198 290 30 77 chr2 51776263 51776432 -201480151 - L2 LINE L2 -203 3069 2909 450 264 60 53 chr2 51776438 51776722 -201479861 - L1M4 LINE L1 -1091 5055 4770 21 95 0 0 chr2 51776868 51776931 -201479652 + AT_rich Low_complexity Low_complexity 1 63 0 498 310 113 63 chr2 51777148 51777363 -201479220 - L1M4 LINE L1 -1751 4395 4192 2185 101 0 7 chr2 51777363 51777676 -201478907 - AluSq SINE Alu 0 311 1 498 310 113 63 chr2 51777676 51778098 -201478485 - L1M4 LINE L1 -1954 4192 3725 272 268 52 55 chr2 51778111 51778440 -201478143 - L1M4 LINE L1 -2754 3392 3065 481 252 82 36 chr2 51778571 51779286 -201477297 - L1MEc LINE L1 -1601 5964 5284 1983 128 26 7 chr2 51779286 51779590 -201476993 - AluSx SINE Alu 0 312 3 481 252 82 36 chr2 51779590 51780011 -201476572 - L1MEc LINE L1 -2281 5284 4884 2226 189 44 40 chr2 51780011 51780514 -201476069 + MLT1D LTR MaLR 1 505 0 481 252 82 36 chr2 51780514 51780583 -201476000 - L1MEc LINE L1 -2681 4884 4820 1893 116 40 11 chr2 51780583 51780859 -201475724 + AluSq SINE Alu 16 299 -14 481 252 82 36 chr2 51780859 51781197 -201475386 - L1MEc LINE L1 -2745 4820 4166 917 134 21 14 chr2 51781197 51781339 -201475244 - LTR8 LTR ERV1 0 691 549 7196 22 0 0 chr2 51781397 51782226 -201474357 - L1PA3 LINE L1 -3 6152 5324 7289 27 0 22 chr2 51782227 51783138 -201473445 + L1PA3 LINE L1 4405 5295 -851 659 195 36 56 chr2 51783141 51783336 -201473247 - LTR8 LTR ERV1 -163 528 338 4957 127 5 3 chr2 51783336 51784083 -201472500 + HUERS-P1 LTR ERV1 5515 6263 0 3121 109 36 86 chr2 51784083 51784308 -201472275 + LTR8 LTR ERV1 1 236 -455 2310 90 3 0 chr2 51784308 51784607 -201471976 + AluSp SINE Alu 1 300 -13 3121 109 36 86 chr2 51784607 51784941 -201471642 + LTR8 LTR ERV1 236 532 -159 397 225 0 0 chr2 51785782 51785853 -201470730 + LTR8 LTR ERV1 521 591 -100 921 195 24 30 chr2 51785877 51786107 -201470476 - LTR8 LTR ERV1 -346 381 141 876 182 19 7 chr2 51786143 51786317 -201470266 - LTR8A LTR ERV1 -386 160 1 977 224 24 125 chr2 51786324 51786447 -201470136 - L1MEc LINE L1 -3400 4165 4031 2338 213 35 66 chr2 51786447 51787160 -201469423 + LTR8 LTR ERV1 1 691 0 977 224 24 125 chr2 51787160 51787765 -201468818 - L1MEc LINE L1 -3534 4031 3512 1426 181 30 37 chr2 51787814 51788113 -201468470 + MER2 DNA MER2_type 49 345 0 31827 109 11 57 chr2 51788233 51794683 -201461900 + L1PA7 LINE L1 12 6152 -2 1218 264 44 34 chr2 51794691 51795190 -201461393 - L1MEc LINE L1 -4438 3308 2805 322 311 33 0 chr2 51795323 51795445 -201461138 - L1MEc LINE L1 -4928 2818 2693 1531 287 103 34 chr2 51795500 51796513 -201460070 - L1MEc LINE L1 -5130 2616 1534 6619 219 35 24 chr2 51796527 51797703 -201458880 - L1MC1 LINE L1 -1 6315 5154 465 96 60 0 chr2 51797703 51797786 -201458797 - L1PA13 LINE L1 -6 6157 6070 6619 219 35 24 chr2 51797786 51799617 -201456966 - L1MC1 LINE L1 -1162 5154 3278 260 259 37 74 chr2 51799975 51800110 -201456473 - L1MC1 LINE L1 -4869 1250 1121 1147 236 130 32 chr2 51800128 51800560 -201456023 - Charlie4a DNA MER1_type -15 493 20 252 313 131 26 chr2 51800636 51801131 -201455452 - L1MC1 LINE L1 -5030 1089 543 1955 147 3 0 chr2 51801183 51801475 -201455108 - AluSx SINE Alu -19 293 1 1021 172 120 0 chr2 51801621 51801854 -201454729 - L1MA8 LINE L1 -2 6289 6029 259 310 44 70 chr2 51801887 51802229 -201454354 - L1MC1 LINE L1 -5777 342 10 1743 220 145 2 chr2 51803942 51804397 -201452186 - MLT2B1 LTR ERVL 0 520 1 331 336 125 20 chr2 51804858 51805153 -201451430 + L1ME4a LINE L1 5525 5850 -271 1719 156 38 41 chr2 51805155 51805520 -201451063 - THE1B LTR MaLR 0 364 1 302 328 69 9 chr2 51806735 51806851 -201449732 + L2 LINE L2 3150 3272 0 200 86 29 0 chr2 51807174 51807209 -201449374 + (GA)n Simple_repeat Simple_repeat 1 36 0 225 0 0 0 chr2 51808125 51808150 -201448433 + (CA)n Simple_repeat Simple_repeat 2 26 0 1404 189 129 0 chr2 51808624 51808926 -201447657 + L1PA16 LINE L1 5818 6158 -8 233 135 0 77 chr2 51809321 51809373 -201447210 + MER5B DNA MER1_type 8 55 -123 284 282 120 56 chr2 51809382 51809524 -201447059 + MER5B DNA MER1_type 21 171 -7 278 331 13 33 chr2 51809700 51809851 -201446732 + L2 LINE L2 2435 2582 -732 262 385 0 41 chr2 51809896 51810018 -201446565 + L2 LINE L2 2762 2878 -436 1397 283 130 50 chr2 51810370 51811958 -201444625 - L1ME LINE L1 -523 5647 3848 1664 158 35 18 chr2 51811958 51812242 -201444341 + AluJb SINE Alu 2 290 -22 1397 283 130 50 chr2 51812242 51812734 -201443849 - L1ME LINE L1 -2322 3848 3397 1610 181 0 17 chr2 51812875 51813174 -201443409 + AluJb SINE Alu 7 300 -12 306 274 221 9 chr2 51814917 51815030 -201441553 + L2 LINE L2 3136 3272 0 22 56 0 0 chr2 51815083 51815119 -201441464 + AT_rich Low_complexity Low_complexity 1 36 0 2107 193 56 5 chr2 51816328 51816758 -201439825 - Tigger2 DNA MER2_type 0 2718 2267 452 145 0 0 chr2 51816742 51816811 -201439772 - Tigger2 DNA MER2_type -2649 69 1 * 184 283 0 19 chr2 51817341 51817394 -201439189 - L2 LINE L2 0 3313 3262 422 341 102 6 chr2 51817540 51817716 -201438867 + MIR3 SINE MIR 10 202 -6 345 296 0 40 chr2 51817797 51817922 -201438661 + MIR SINE MIR 99 218 -44 1704 162 99 0 chr2 51818324 51818638 -201437945 + MER7A DNA MER2_type 3 345 -1 225 0 0 0 chr2 51818639 51818664 -201437919 + (TG)n Simple_repeat Simple_repeat 2 26 0 733 318 57 57 chr2 51820749 51821174 -201435409 + LTR16C LTR ERVL 1 425 -66 289 301 261 6 chr2 51821612 51821788 -201434795 + L3 LINE CR1 273 493 -1084 812 231 24 33 chr2 51821855 51822067 -201434516 - MER20 DNA MER1_type -9 210 1 1023 335 175 10 chr2 51822153 51822840 -201433743 + L3 LINE CR1 715 1514 -63 284 324 108 0 chr2 51822999 51823147 -201433436 - MIR SINE MIR -50 212 49 1261 126 0 0 chr2 51823747 51823922 -201432661 - AluSg/x SINE Alu -15 297 123 403 206 41 12 chr2 51824113 51824283 -201432300 + (TA)n Simple_repeat Simple_repeat 1 175 0 423 0 0 0 chr2 51827032 51827079 -201429504 + (TG)n Simple_repeat Simple_repeat 1 47 0 2028 117 37 7 chr2 51831344 51831644 -201424939 + AluSc SINE Alu 1 309 0 347 333 76 85 chr2 51836081 51836516 -201420067 - L2 LINE L2 -2 3270 2840 27 0 0 0 chr2 51836866 51836893 -201419690 + AT_rich Low_complexity Low_complexity 1 27 0 1192 195 81 16 chr2 51837211 51837457 -201419126 + AluJo SINE Alu 12 273 -39 220 189 0 0 chr2 51838385 51838422 -201418161 + (TG)n Simple_repeat Simple_repeat 1 37 0 1469 184 4 19 chr2 51838469 51838740 -201417843 + AluJo SINE Alu 2 268 -44 249 81 47 81 chr2 51838777 51838863 -201417720 + CT-rich Low_complexity Low_complexity 1 83 0 406 284 131 38 chr2 51839102 51839285 -201417298 - MIR SINE MIR -26 236 37 2421 84 0 0 chr2 51839410 51839718 -201416865 - AluY SINE Alu -1 310 3 547 296 47 24 chr2 51841418 51841631 -201414952 - MIR SINE MIR 0 262 45 357 259 162 56 chr2 51842762 51842978 -201413605 - MIR SINE MIR -13 249 11 225 0 0 0 chr2 51843152 51843177 -201413406 + (CA)n Simple_repeat Simple_repeat 2 26 0 1084 198 71 77 chr2 51843272 51843750 -201412833 + MER67C LTR ERV1 27 511 -3 218 314 190 15 chr2 51844571 51844708 -201411875 + MIR SINE MIR 102 262 0 200 271 200 0 chr2 51846139 51846209 -201410374 + L2 LINE L2 3208 3291 -22 236 216 68 88 chr2 51847437 51847585 -201408998 - L2 LINE L2 -72 3241 3097 198 257 14 54 chr2 51847799 51847873 -201408710 + L3b LINE CR1 1156 1226 -357 1874 166 0 0 chr2 51848924 51849243 -201407340 - AluSx SINE Alu 0 320 2 293 236 27 27 chr2 51851604 51851714 -201404869 - L1M4 LINE L1 -2764 3382 3273 7024 55 9 4 chr2 51851726 51853024 -201403559 - L1PA7 LINE L1 0 6154 4847 1441 96 0 0 chr2 51853024 51853232 -201403351 + L1PA7 LINE L1 4617 4824 -1322 756 162 0 74 chr2 51853792 51853990 -201402593 - FLAM_C SINE Alu 0 193 7 378 234 21 11 chr2 51853991 51854085 -201402498 + MER20 DNA MER1_type 125 219 0 229 254 193 26 chr2 51854108 51854222 -201402361 + MIR SINE MIR 116 248 -14 26 50 0 0 chr2 51857650 51857690 -201398893 + AT_rich Low_complexity Low_complexity 1 40 0 426 270 127 0 chr2 51858345 51858471 -201398112 - MIR3 SINE MIR -35 173 32 207 161 0 0 chr2 51858502 51858533 -201398050 + (TCCA)n Simple_repeat Simple_repeat 2 32 0 237 192 19 0 chr2 51859979 51860031 -201396552 + (TA)n Simple_repeat Simple_repeat 1 53 0 24 24 0 24 chr2 51860124 51860141 -201396442 + AT_rich Low_complexity Low_complexity 1 17 -24 1566 107 0 0 chr2 51860141 51860365 -201396218 + L1PA8 LINE L1 5943 6166 -6 24 24 0 24 chr2 51860365 51860389 -201396194 + AT_rich Low_complexity Low_complexity 17 41 0 234 150 0 0 chr2 51860897 51860937 -201395646 + (GA)n Simple_repeat Simple_repeat 1 40 0 219 279 115 0 chr2 51862414 51862475 -201394108 + L2 LINE L2 3232 3299 -14 591 335 38 30 chr2 51863462 51863698 -201392885 + MIR SINE MIR 20 257 -5 481 330 101 9 chr2 51865888 51866106 -201390477 + MIR SINE MIR 24 261 -1 32 43 0 0 chr2 51867350 51867396 -201389187 + AT_rich Low_complexity Low_complexity 1 46 0 261 83 0 0 chr2 51867647 51867683 -201388900 + (CA)n Simple_repeat Simple_repeat 1 36 0 557 185 118 17 chr2 51868294 51868413 -201388170 + FLAM_A SINE Alu 1 131 -2 184 225 25 0 chr2 51868892 51868932 -201387651 + MIR3 SINE MIR 127 167 -41 449 232 0 0 chr2 51868954 51869049 -201387534 + L1MD2 LINE L1 6033 6127 -232 1245 186 8 8 chr2 51869049 51869318 -201387265 + AluSc SINE Alu 43 311 0 1827 98 8 4 chr2 51870642 51870887 -201385696 + AluSx SINE Alu 10 255 -57 2236 112 0 3 chr2 51870892 51871188 -201385395 + AluSx SINE Alu 1 295 -17 1701 171 24 3 chr2 51871219 51871511 -201385072 - AluSx SINE Alu -12 300 3 2130 101 0 3 chr2 51871614 51871901 -201384682 - AluSx SINE Alu -26 286 1 190 258 0 48 chr2 51873106 51873168 -201383415 - L2 LINE L2 -1020 2294 2236 429 261 63 0 chr2 51873511 51873653 -201382930 + L1MD3 LINE L1 7840 7990 -5 668 122 0 0 chr2 51876000 51876090 -201380493 - 5S rRNA rRNA -31 90 1 261 163 0 0 chr2 51879930 51879979 -201376604 + (CA)n Simple_repeat Simple_repeat 2 50 0 197 146 21 0 chr2 51881416 51881464 -201375119 + (TA)n Simple_repeat Simple_repeat 1 49 0 515 257 56 6 chr2 51882084 51882263 -201374320 + L1MC4a LINE L1 5694 5881 -1927 2113 117 0 38 chr2 51882351 51882668 -201373915 - AluSx SINE Alu -7 305 1 195 225 100 0 chr2 51883201 51883241 -201373342 + MIR SINE MIR 93 136 -72 1034 165 55 50 chr2 51883581 51883799 -201372784 + MER20 DNA MER1_type 1 219 0 602 249 99 10 chr2 51883889 51884090 -201372493 - L2 LINE L2 -1147 2167 1949 2024 115 10 0 chr2 51884221 51884509 -201372074 + AluSc SINE Alu 4 294 -15 220 345 46 0 chr2 51885135 51885222 -201371361 - MIR3 SINE MIR -21 187 97 2093 122 20 0 chr2 51885350 51885645 -201370938 + AluSg SINE Alu 1 301 -9 220 341 24 0 chr2 51886385 51886470 -201370113 - MIR SINE MIR -109 153 67 325 288 36 43 chr2 51886523 51886662 -201369921 - MER5A DNA MER1_type -1 188 51 217 301 27 0 chr2 51887688 51887761 -201368822 + GA-rich Low_complexity Low_complexity 2 76 0 293 309 77 44 chr2 51888199 51888380 -201368203 - MER5A DNA MER1_type 0 189 3 554 323 30 102 chr2 51889266 51889666 -201366917 + L2 LINE L2 2900 3270 -2 34 24 0 0 chr2 51889797 51889838 -201366745 + AT_rich Low_complexity Low_complexity 1 41 0 21 57 0 0 chr2 51890107 51890142 -201366441 + AT_rich Low_complexity Low_complexity 1 35 0 1490 203 30 20 chr2 51890225 51890520 -201366063 + AluJb SINE Alu 3 300 -12 309 26 0 0 chr2 51891044 51891082 -201365501 + (CA)n Simple_repeat Simple_repeat 2 39 0 397 335 106 18 chr2 51891333 51891560 -201365023 + MIR SINE MIR 3 249 -13 1487 186 108 31 chr2 51892538 51892933 -201363650 - Charlie1b DNA MER1_type -2238 523 89 2110 127 28 35 chr2 51892933 51893115 -201363468 - L1MA5 LINE L1 -5 6295 6113 1605 170 72 4 chr2 51893115 51893392 -201363191 + AluJb SINE Alu 1 296 -16 2110 127 28 35 chr2 51893392 51893603 -201362980 - L1MA5 LINE L1 -187 6113 5905 1487 186 108 31 chr2 51893603 51893652 -201362931 - Charlie1b DNA MER1_type -2672 89 45 21 0 0 0 chr2 51893747 51893768 -201362815 + AT_rich Low_complexity Low_complexity 1 21 0 182 194 183 86 chr2 51894354 51894447 -201362136 - L3 LINE CR1 -674 903 802 180 0 0 0 chr2 51894953 51894973 -201361610 + (A)n Simple_repeat Simple_repeat 1 20 0 695 320 134 40 chr2 51895648 51895798 -201360785 - L2 LINE L2 -6 3307 3172 1850 291 25 23 chr2 51895798 51896407 -201360176 - MER90 LTR ERV1 -1 613 4 695 320 134 40 chr2 51896407 51897036 -201359547 - L2 LINE L2 -141 3172 2452 5974 190 42 25 chr2 51897392 51898593 -201357990 + L1MC1 LINE L1 3961 5207 -1126 1640 105 52 133 chr2 51898593 51898917 -201357666 + AluSc SINE Alu 3 300 -9 5974 190 42 25 chr2 51898917 51900046 -201356537 + L1MC1 LINE L1 5207 6315 -18 2548 50 0 0 chr2 51901833 51902136 -201354447 + AluY SINE Alu 1 303 -8 240 35 0 0 chr2 51902195 51902224 -201354359 + (A)n Simple_repeat Simple_repeat 1 29 0 221 261 38 140 chr2 51902300 51902457 -201354126 - L2 LINE L2 0 3272 3132 1796 202 148 14 chr2 51902766 51903209 -201353374 + MLT1D LTR MaLR 1 624 0 27 0 0 0 chr2 51903317 51903344 -201353239 + AT_rich Low_complexity Low_complexity 1 27 0 410 290 168 7 chr2 51905334 51905489 -201351094 - MER5A DNA MER1_type 0 189 10 21 36 0 0 chr2 51905725 51905753 -201350830 + AT_rich Low_complexity Low_complexity 1 28 0 268 288 131 39 chr2 51907489 51907642 -201348941 + MIR SINE MIR 92 258 -4 632 293 77 5 chr2 51907827 51908035 -201348548 + MIR SINE MIR 10 232 -30 1420 222 87 30 chr2 51908110 51908595 -201347988 + MLT1E1 LTR MaLR 31 654 0 218 338 15 0 chr2 51909050 51909118 -201347465 + MIR SINE MIR 22 90 -118 204 342 13 0 chr2 51909562 51909638 -201346945 - MIR SINE MIR -73 135 59 27 0 0 0 chr2 51909996 51910023 -201346560 + AT_rich Low_complexity Low_complexity 1 27 0 197 83 28 0 chr2 51911937 51911973 -201344610 + (CAAAAA)n Simple_repeat Simple_repeat 2 38 0 259 379 82 16 chr2 51912470 51912858 -201343725 + L2 LINE L2 2468 2881 -433 354 358 126 5 chr2 51913195 51913385 -201343198 + L3 LINE CR1 1365 1577 0 1632 200 0 11 chr2 51913394 51913679 -201342904 + AluJo SINE Alu 1 282 -30 4401 51 0 7 chr2 51913720 51914267 -201342316 - L1PA7 LINE L1 -155 5999 5457 577 85 37 0 chr2 51914802 51914884 -201341699 - AluY SINE Alu -14 297 213 28 0 0 0 chr2 51917921 51917949 -201338634 + AT_rich Low_complexity Low_complexity 1 28 0 219 405 15 0 chr2 51918134 51918265 -201338318 - MIR3 SINE MIR -4 204 72 212 385 39 0 chr2 51919003 51919133 -201337450 - L2 LINE L2 0 3313 3179 239 0 32 0 chr2 51920426 51920457 -201336126 + (TTTTTG)n Simple_repeat Simple_repeat 2 33 0 405 327 46 91 chr2 51920629 51920709 -201335874 - MIR SINE MIR -1 261 179 1006 188 22 65 chr2 51920709 51920938 -201335645 - MER20 DNA MER1_type 0 219 1 405 327 46 91 chr2 51920938 51921120 -201335463 - MIR SINE MIR -83 179 11 243 0 0 0 chr2 51921850 51921877 -201334706 + (A)n Simple_repeat Simple_repeat 1 27 0 244 308 85 31 chr2 51922169 51922299 -201334284 + MIR SINE MIR 112 248 -14 24 0 0 0 chr2 51922415 51922439 -201334144 + AT_rich Low_complexity Low_complexity 1 24 0 1966 136 32 29 chr2 51922749 51923123 -201333460 - THE1C LTR MaLR 0 375 1 2332 90 0 0 chr2 51925696 51925995 -201330588 + AluSg1 SINE Alu 1 299 -10 2579 45 0 7 chr2 51925998 51926307 -201330276 + AluY SINE Alu 1 307 -4 2025 138 0 3 chr2 51928186 51928482 -201328101 - AluSc SINE Alu -14 295 1 1125 69 0 0 chr2 51928484 51928615 -201327968 - AluY SINE Alu -180 131 1 23 33 0 0 chr2 51928818 51928848 -201327735 + AT_rich Low_complexity Low_complexity 1 30 0 301 287 69 0 chr2 51930242 51930343 -201326240 - MIR SINE MIR -28 234 127 278 305 102 25 chr2 51930893 51930951 -201325632 + MIR3 SINE MIR 37 89 -119 1977 142 0 10 chr2 51930951 51931247 -201325336 - AluSg SINE Alu -15 295 3 278 305 102 25 chr2 51931247 51931306 -201325277 + MIR3 SINE MIR 89 163 -45 289 282 190 20 chr2 51932005 51932185 -201324398 - MIR SINE MIR -14 248 41 2292 102 0 13 chr2 51933202 51933515 -201323068 - AluSc SINE Alu 0 309 1 825 149 17 6 chr2 51933586 51933761 -201322822 + CT-rich Low_complexity Low_complexity 4 180 0 1554 164 45 0 chr2 51933788 51934056 -201322527 - AluJb SINE Alu -24 288 9 21 0 0 0 chr2 51934392 51934413 -201322170 + AT_rich Low_complexity Low_complexity 1 21 0 1831 173 25 33 chr2 51935316 51935680 -201320903 + MLT1A1 LTR MaLR 5 365 0 1222 198 75 78 chr2 51935693 51936077 -201320506 + MLT1B LTR MaLR 4 386 -4 194 316 38 60 chr2 51936119 51936252 -201320331 + MIR SINE MIR 63 192 -70 23 0 0 0 chr2 51936284 51936307 -201320276 + AT_rich Low_complexity Low_complexity 1 23 0 1236 194 75 124 chr2 51936462 51936994 -201319589 + MER67D LTR ERV1 5 510 -4 1127 261 29 34 chr2 51938907 51939256 -201317327 + MLT1A2 LTR MaLR 3 349 -25 212 86 29 0 chr2 51939260 51939295 -201317288 + (CA)n Simple_repeat Simple_repeat 2 37 0 235 206 16 16 chr2 51939301 51939364 -201317219 + (TA)n Simple_repeat Simple_repeat 1 63 0 420 200 0 82 chr2 51939365 51939500 -201317083 + L2 LINE L2 3146 3269 -44 3840 147 11 20 chr2 51939504 51940425 -201316158 + L1P4 LINE L1 4685 5596 -565 263 274 30 96 chr2 51941748 51942018 -201314565 - HAL1 LINE L1 0 2507 2256 1253 254 65 43 chr2 51942208 51942652 -201313931 + L1ME1 LINE L1 5705 6158 -8 233 129 0 0 chr2 51942753 51942784 -201313799 + Alu SINE Alu 86 116 -17 360 313 157 20 chr2 51942788 51943037 -201313546 - HAL1 LINE L1 -550 1957 1675 1835 170 6 6 chr2 51943785 51944097 -201312486 + AluJo SINE Alu 1 312 0 295 286 103 24 chr2 51944198 51944324 -201312259 + MIR3 SINE MIR 43 178 -30 256 326 23 0 chr2 51944769 51944855 -201311728 + L2 LINE L2 2983 3070 -243 1595 183 0 3 chr2 51944875 51945160 -201311423 + AluJb SINE Alu 13 296 -16 818 59 0 0 chr2 51945166 51945268 -201311315 + AluY SINE Alu 1 102 -209 2595 95 0 3 chr2 51945368 51945737 -201310846 + L1PA13 LINE L1 5796 6163 0 1795 156 26 52 chr2 51947146 51947531 -201309052 + THE1C LTR MaLR 1 375 0 1087 270 119 10 chr2 51947739 51948135 -201308448 + MLT1H LTR MaLR 111 549 0 22 0 0 0 chr2 51948381 51948403 -201308180 + AT_rich Low_complexity Low_complexity 1 22 0 823 245 49 58 chr2 51949386 51949767 -201306816 + MLT1F1 LTR MaLR 139 563 -4 523 106 11 11 chr2 51949800 51949894 -201306689 + (TCCC)n Simple_repeat Simple_repeat 4 97 0 1893 142 3 0 chr2 51949971 51950283 -201306300 + AluSg SINE Alu 1 310 0 1914 118 0 0 chr2 51950285 51950540 -201306043 + AluSx SINE Alu 29 283 -29 35 71 0 0 chr2 51951388 51951458 -201305125 + AT_rich Low_complexity Low_complexity 1 70 0 378 264 83 55 chr2 51951513 51951767 -201304816 + HAL1 LINE L1 2245 2505 -2 1181 52 0 13 chr2 51951937 51952092 -201304491 - L1PA5 LINE L1 0 6154 6002 505 48 0 0 chr2 51952093 51952156 -201304427 + L1P LINE L1 3971 4033 -2113 709 169 15 0 chr2 51952733 51952863 -201303720 + MER97a DNA MER1_type? 46 177 -717 2296 105 62 0 chr2 51953285 51953638 -201302945 + THE1C LTR MaLR 1 375 0 292 343 76 9 chr2 51953694 51953799 -201302784 - L2 LINE L2 -2 3311 3200 243 319 0 0 chr2 51955116 51955185 -201301398 - MIR SINE MIR -19 243 175 270 0 0 0 chr2 51956230 51956260 -201300323 + (CAA)n Simple_repeat Simple_repeat 1 30 0 1228 103 6 17 chr2 51956423 51956598 -201299985 - AluSg/x SINE Alu -19 293 121 247 296 12 0 chr2 51957240 51957321 -201299262 - MER20B DNA MER1_type -587 196 115 314 191 374 48 chr2 51957706 51957853 -201298730 - MIR SINE MIR -66 196 2 277 271 71 0 chr2 51958287 51958357 -201298226 + MIR SINE MIR 80 154 -108 444 250 76 76 chr2 51958762 51958986 -201297597 + L2 LINE L2 3090 3313 0 32 0 0 0 chr2 51959508 51959540 -201297043 + AT_rich Low_complexity Low_complexity 1 32 0 415 256 40 0 chr2 51960204 51960329 -201296254 + MER94 DNA DNA 1 130 -4 504 301 32 27 chr2 51960397 51960583 -201296000 - MIR3 SINE MIR -2 206 20 28 71 0 0 chr2 51961014 51961070 -201295513 + AT_rich Low_complexity Low_complexity 1 56 0 443 232 45 27 chr2 51962814 51962926 -201293657 + L2 LINE L2 3188 3301 -12 313 315 0 0 chr2 51963547 51963639 -201292944 + L2 LINE L2 3221 3312 -1 22 0 0 0 chr2 51963808 51963830 -201292753 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 51967492 51967520 -201289063 + AT_rich Low_complexity Low_complexity 1 28 0 319 334 69 82 chr2 51968035 51968742 -201287841 + L2 LINE L2 2560 3266 -6 192 135 0 0 chr2 51969125 51969162 -201287421 + (CATA)n Simple_repeat Simple_repeat 4 40 0 2442 129 6 3 chr2 51969694 51970057 -201286526 + THE1B LTR MaLR 1 364 0 10463 112 23 30 chr2 51970057 51971641 -201284942 + THE1B-int LTR MaLR 1 1573 -7 2366 122 8 6 chr2 51971641 51971995 -201284588 + THE1B LTR MaLR 2 356 -8 1517 236 49 6 chr2 51973237 51973584 -201282999 + MLT1A1 LTR MaLR 4 365 0 372 22 0 0 chr2 51974617 51974662 -201281921 + (CA)n Simple_repeat Simple_repeat 2 46 0 400 339 0 0 chr2 51974845 51974963 -201281620 + L2 LINE L2 3191 3308 -5 23 68 0 0 chr2 51975284 51975328 -201281255 + AT_rich Low_complexity Low_complexity 1 44 0 228 85 0 169 chr2 51975715 51975774 -201280809 + U5 snRNA snRNA 1 49 -67 319 308 96 39 chr2 51976214 51976422 -201280161 - MIR SINE MIR -13 249 30 290 257 128 0 chr2 51976615 51976724 -201279859 - MIR SINE MIR -77 185 63 563 256 227 31 chr2 51979529 51979763 -201276820 + MIR SINE MIR 2 261 -1 2436 80 0 0 chr2 51980921 51981223 -201275360 - AluY SINE Alu -9 302 1 2678 20 0 0 chr2 51981562 51981863 -201274720 + AluYa5 SINE Alu 1 301 -10 215 347 40 0 chr2 51982304 51982379 -201274204 - L3b LINE CR1 -258 1325 1248 2079 158 10 47 chr2 51982379 51982784 -201273799 + MLT1B LTR MaLR 1 390 0 318 347 91 23 chr2 51984272 51984448 -201272135 + L2 LINE L2 3081 3268 -4 274 200 178 22 chr2 51985532 51985622 -201270961 + MIR SINE MIR 129 232 -30 272 263 81 30 chr2 51985655 51985754 -201270829 - L3 LINE CR1 -1 1576 1473 403 358 33 0 chr2 51986872 51987023 -201269560 - MER91A DNA MER1_type -40 156 1 790 272 45 29 chr2 51987456 51987702 -201268881 - MIR SINE MIR -6 256 7 261 257 86 79 chr2 51988111 51988263 -201268320 + MIR SINE MIR 94 246 -16 21 0 0 0 chr2 51989117 51989138 -201267445 + AT_rich Low_complexity Low_complexity 1 21 0 2224 236 96 48 chr2 51989413 51990337 -201266246 - L1MC4a LINE L1 0 7808 6840 796 272 27 27 chr2 51990342 51990566 -201266017 + MER58A DNA MER1_type 1 224 0 1852 173 66 118 chr2 51990951 51991529 -201265054 + MER44D DNA MER2_type 3 605 0 1750 122 93 0 chr2 51992370 51992640 -201263943 + AluSc SINE Alu 1 295 -14 25 0 0 0 chr2 51992832 51992857 -201263726 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr2 51993048 51993071 -201263512 + AT_rich Low_complexity Low_complexity 1 23 0 6524 127 128 32 chr2 51994494 51995841 -201260742 - pTR5 LTR ERV1 -238 2200 292 253 216 0 0 chr2 51996325 51996376 -201260207 - L2 LINE L2 -1 3312 3262 31 82 0 0 chr2 51996727 51996800 -201259783 + AT_rich Low_complexity Low_complexity 1 73 0 406 377 6 0 chr2 51997013 51997172 -201259411 + MIR3 SINE MIR 20 179 -29 27 49 0 0 chr2 51997228 51997269 -201259314 + AT_rich Low_complexity Low_complexity 1 41 0 344 111 16 0 chr2 51997865 51997928 -201258655 + (GA)n Simple_repeat Simple_repeat 2 65 0 263 200 232 0 chr2 52000092 52000187 -201256396 - MER103 DNA DNA -32 134 18 1876 145 10 10 chr2 52000578 52000875 -201255708 + AluJo SINE Alu 1 297 -15 316 258 15 0 chr2 52001070 52001136 -201255447 - L2 LINE L2 -3 3269 3203 27 29 0 0 chr2 52001405 52001439 -201255144 + AT_rich Low_complexity Low_complexity 1 34 0 1388 186 3 61 chr2 52004407 52004719 -201251864 + AluJo SINE Alu 1 294 -18 898 286 14 0 chr2 52004783 52004996 -201251587 - MIR SINE MIR -45 217 2 191 36 36 0 chr2 52005829 52005857 -201250726 + (GAAAA)n Simple_repeat Simple_repeat 5 33 0 28 0 0 0 chr2 52006838 52006866 -201249717 + AT_rich Low_complexity Low_complexity 1 28 0 1752 24 0 0 chr2 52006866 52007074 -201249509 - L1PA5 LINE L1 -6 6148 5941 2030 132 3 0 chr2 52008717 52009013 -201247570 - AluSp SINE Alu -16 297 1 180 370 97 40 chr2 52009248 52009475 -201247108 - L2 LINE L2 0 3272 3033 286 237 82 41 chr2 52009608 52009705 -201246878 - MIR SINE MIR -20 242 142 459 0 0 0 chr2 52009906 52009957 -201246626 + (T)n Simple_repeat Simple_repeat 1 51 0 823 108 8 16 chr2 52010449 52010578 -201246005 - L1MB7 LINE L1 -19 6165 6038 195 186 0 0 chr2 52010646 52010689 -201245894 + (TTA)n Simple_repeat Simple_repeat 2 44 0 256 260 167 10 chr2 52010793 52010889 -201245694 - MIR SINE MIR -74 188 78 24 0 0 0 chr2 52012174 52012198 -201244385 + AT_rich Low_complexity Low_complexity 1 24 0 263 369 128 25 chr2 52013535 52013855 -201242728 - L2 LINE L2 0 3272 2920 198 0 0 0 chr2 52014940 52014962 -201241621 + (CAAA)n Simple_repeat Simple_repeat 1 22 0 536 264 207 5 chr2 52015658 52015851 -201240732 - MIR SINE MIR -25 237 6 287 313 76 35 chr2 52015977 52016175 -201240408 - MIR SINE MIR -50 212 7 23 54 0 0 chr2 52017214 52017251 -201239332 + AT_rich Low_complexity Low_complexity 1 37 0 186 43 0 0 chr2 52018593 52018616 -201237967 + (TA)n Simple_repeat Simple_repeat 1 23 0 616 309 52 16 chr2 52018946 52019140 -201237443 - MIR SINE MIR -50 212 12 283 266 121 0 chr2 52019388 52019512 -201237071 - MIR SINE MIR -12 250 112 335 323 122 30 chr2 52019581 52019950 -201236633 + L1M4 LINE L1 3789 4191 -1955 243 308 26 51 chr2 52020254 52020371 -201236212 + MIR SINE MIR 22 135 -73 212 179 0 0 chr2 52020668 52020707 -201235876 + A-rich Low_complexity Low_complexity 1 39 0 2424 67 0 6 chr2 52021284 52021596 -201234987 + AluY SINE Alu 1 310 -1 731 325 118 55 chr2 52022248 52022441 -201234142 - L3 LINE CR1 -2 1575 1396 1928 130 14 0 chr2 52022441 52022733 -201233850 + AluSx SINE Alu 6 301 -11 731 325 118 55 chr2 52022733 52023283 -201233300 - L3 LINE CR1 -181 1396 785 239 319 35 14 chr2 52023788 52023929 -201232654 + MIR SINE MIR 117 260 -2 287 294 15 0 chr2 52024222 52024290 -201232293 + L2 LINE L2 3204 3272 0 197 352 131 21 chr2 52024368 52024513 -201232070 + L2 LINE L2 3112 3272 0 198 280 80 50 chr2 52024947 52025047 -201231536 - L2 LINE L2 -2 3311 3209 6015 155 24 17 chr2 52025135 52026268 -201230315 + L1MC1 LINE L1 5197 6325 -8 250 96 0 19 chr2 52026272 52026324 -201230259 - LTR66 LTR ERVL -166 444 394 21 36 0 0 chr2 52026328 52026356 -201230227 + AT_rich Low_complexity Low_complexity 1 28 0 607 311 57 16 chr2 52026464 52026708 -201229875 - MIR SINE MIR -6 256 3 516 186 10 10 chr2 52029312 52029409 -201227174 - MER5A DNA MER1_type -84 105 9 27 29 0 0 chr2 52031284 52031318 -201225265 + AT_rich Low_complexity Low_complexity 1 34 0 243 250 0 31 chr2 52031387 52031451 -201225132 + (CATA)n Simple_repeat Simple_repeat 2 63 0 566 170 75 145 chr2 52032040 52032100 -201224483 - MIR SINE MIR -13 249 186 1947 118 10 3 chr2 52032100 52032388 -201224195 - AluSg SINE Alu -12 298 9 566 170 75 145 chr2 52032388 52032527 -201224056 - MIR SINE MIR -76 186 64 452 154 0 145 chr2 52032556 52032673 -201223910 - MER2 DNA MER2_type -221 124 25 1582 300 175 17 chr2 52034128 52035346 -201221237 - L2 LINE L2 -3 3310 1880 782 261 30 0 chr2 52035589 52035815 -201220768 - L1ME1 LINE L1 -45 6121 5895 247 282 14 0 chr2 52036056 52036127 -201220456 + (CATATA)n Simple_repeat Simple_repeat 1 72 0 192 77 0 0 chr2 52036395 52036421 -201220162 + (TTG)n Simple_repeat Simple_repeat 2 27 0 33 25 0 0 chr2 52037929 52037969 -201218614 + AT_rich Low_complexity Low_complexity 1 40 0 1927 136 0 4 chr2 52039779 52040059 -201216524 + AluSq SINE Alu 5 321 0 343 0 0 0 chr2 52040059 52040097 -201216486 + (TAAA)n Simple_repeat Simple_repeat 3 96 0 21 0 0 0 chr2 52040555 52040576 -201216007 + AT_rich Low_complexity Low_complexity 1 21 0 313 239 134 35 chr2 52041057 52041199 -201215384 - MIR SINE MIR -28 234 79 241 265 108 29 chr2 52042570 52042672 -201213911 + L2 LINE L2 3162 3271 -1 186 103 0 0 chr2 52043039 52043068 -201213515 + (TG)n Simple_repeat Simple_repeat 1 29 0 2343 94 0 0 chr2 52043382 52043680 -201212903 - AluY SINE Alu -13 298 1 252 377 68 0 chr2 52044794 52044940 -201211643 - MIR3 SINE MIR -3 205 50 2284 80 3 0 chr2 52046493 52046779 -201209804 + AluY SINE Alu 8 294 -17 216 0 0 0 chr2 52046782 52046806 -201209777 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 434 164 9 60 chr2 52048191 52048307 -201208276 + L1MA7 LINE L1 6177 6286 -5 2199 117 3 0 chr2 52050122 52050422 -201206161 + AluSx SINE Alu 4 304 -8 234 0 0 0 chr2 52050677 52050703 -201205880 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 21 71 0 0 chr2 52050969 52051011 -201205572 + AT_rich Low_complexity Low_complexity 1 42 0 422 285 35 112 chr2 52051556 52051914 -201204669 - Charlie8 DNA MER1_type -995 1422 1 220 300 12 0 chr2 52051957 52052037 -201204546 + (TA)n Simple_repeat Simple_repeat 1 81 0 6283 147 11 8 chr2 52052307 52053688 -201202895 + L1MA4A LINE L1 4914 6300 -3 26 74 0 0 chr2 52053787 52053841 -201202742 + AT_rich Low_complexity Low_complexity 1 54 0 262 155 56 0 chr2 52054190 52054261 -201202322 + GA-rich Low_complexity Low_complexity 2 76 0 186 361 44 29 chr2 52054325 52054530 -201202053 + L3b LINE CR1 1253 1460 -123 216 158 0 0 chr2 52055706 52055744 -201200839 + (TATG)n Simple_repeat Simple_repeat 3 40 0 460 228 50 110 chr2 52056233 52056597 -201199986 - L1MC4 LINE L1 -5 8037 7696 1991 64 0 0 chr2 52057299 52057550 -201199033 + L1P3 LINE L1 5538 5788 -366 420 325 24 8 chr2 52059324 52059447 -201197136 + MIR SINE MIR 62 186 -76 244 372 39 23 chr2 52060715 52060844 -201195739 + L2 LINE L2 3138 3268 -4 229 317 85 12 chr2 52061901 52061983 -201194600 + MLT1K LTR MaLR 135 222 -366 865 231 23 14 chr2 52062708 52062929 -201193654 + L1MB7 LINE L1 5951 6173 -11 2131 152 23 8 chr2 52063100 52063494 -201193089 - L1MB3 LINE L1 0 6183 5784 506 211 0 0 chr2 52063494 52063589 -201192994 - Tigger7 DNA MER2_type 0 2491 2397 7356 176 52 44 chr2 52063589 52065249 -201191334 - L1M4c LINE L1 -4693 1691 19 901 78 0 71 chr2 52065310 52065451 -201191132 + L1PB1 LINE L1 6018 6148 -3 445 289 61 61 chr2 52066580 52066891 -201189692 + L1ME4a LINE L1 5514 5824 -297 367 248 47 16 chr2 52067100 52067229 -201189354 + L1ME4a LINE L1 5984 6116 -5 223 403 22 29 chr2 52067396 52067535 -201189048 + MIR SINE MIR 3 140 -122 406 278 0 17 chr2 52068012 52068127 -201188456 - MIR SINE MIR 0 262 150 396 0 0 0 chr2 52069140 52069184 -201187399 + (TG)n Simple_repeat Simple_repeat 2 45 0 234 0 0 0 chr2 52070150 52070176 -201186407 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2272 112 0 0 chr2 52071334 52071629 -201184954 + AluSq SINE Alu 1 295 -18 186 298 174 8 chr2 52072794 52072915 -201183668 + L2 LINE L2 3172 3312 -1 213 139 0 23 chr2 52072915 52072958 -201183625 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 22 80 0 0 chr2 52073906 52073956 -201182627 + AT_rich Low_complexity Low_complexity 1 50 0 21 71 0 0 chr2 52074109 52074151 -201182432 + AT_rich Low_complexity Low_complexity 1 42 0 204 40 0 0 chr2 52074237 52074262 -201182321 + (TA)n Simple_repeat Simple_repeat 2 26 0 2191 109 0 13 chr2 52076424 52076728 -201179855 - AluSx SINE Alu -12 300 1 365 248 40 10 chr2 52076736 52076837 -201179746 + MIR SINE MIR 96 199 -63 280 271 0 14 chr2 52077050 52077120 -201179463 + MLT1E1 LTR MaLR 57 125 -529 1353 147 22 13 chr2 52077121 52077352 -201179231 + MER46A DNA MER2_type 1 233 -3 540 30 0 0 chr2 52077352 52077418 -201179165 + (TG)n Simple_repeat Simple_repeat 2 67 0 1239 237 17 17 chr2 52077436 52077736 -201178847 + MLT1E2 LTR MaLR 327 626 0 622 282 6 25 chr2 52078755 52078918 -201177665 - MER5B DNA MER1_type -1 177 18 534 314 110 0 chr2 52080130 52080366 -201176217 - MIR SINE MIR 0 262 1 2165 117 3 0 chr2 52080508 52080816 -201175767 + AluSg SINE Alu 1 309 -1 191 270 54 27 chr2 52080973 52081047 -201175536 - L2 LINE L2 -467 2847 2772 278 222 0 0 chr2 52081065 52081119 -201175464 + MER112 DNA MER1_type 8 61 -199 216 0 0 0 chr2 52081217 52081241 -201175342 + (CA)n Simple_repeat Simple_repeat 1 24 0 886 177 43 126 chr2 52081257 52081358 -201175225 + MER46A DNA MER2_type 3 111 -2620 266 0 29 0 chr2 52081358 52081392 -201175191 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 1777 159 0 4 chr2 52081396 52081672 -201174911 - AluSx SINE Alu -37 275 1 886 177 43 126 chr2 52081672 52081819 -201174764 + MER46A DNA MER2_type 114 235 -1 348 24 0 0 chr2 52081832 52081873 -201174710 + (TG)n Simple_repeat Simple_repeat 1 41 0 2193 158 33 33 chr2 52081882 52082312 -201174271 - Tigger2a DNA MER2_type -1 433 4 219 36 0 0 chr2 52082312 52082340 -201174243 + (TG)n Simple_repeat Simple_repeat 2 29 0 238 258 71 33 chr2 52082354 52082536 -201174047 + MER112 DNA MER1_type 66 254 -6 2082 108 3 14 chr2 52083756 52084051 -201172532 - AluSx SINE Alu -20 292 1 677 118 0 167 chr2 52084087 52084188 -201172395 - FLAM_C SINE Alu -192 120 48 1721 92 149 0 chr2 52084188 52084449 -201172134 - AluSg1 SINE Alu -9 300 1 677 118 0 167 chr2 52084449 52084491 -201172092 - FLAM_C SINE Alu -264 48 1 249 57 0 0 chr2 52085385 52085420 -201171163 + (TG)n Simple_repeat Simple_repeat 2 36 0 237 159 0 0 chr2 52086105 52086149 -201170434 + (CA)n Simple_repeat Simple_repeat 1 44 0 407 214 71 64 chr2 52086586 52086687 -201169896 + MIR SINE MIR 49 153 -109 2160 97 3 45 chr2 52086687 52086996 -201169587 - AluSx SINE Alu -16 296 1 407 214 71 64 chr2 52086996 52087034 -201169549 + MIR SINE MIR 153 189 -73 786 239 54 11 chr2 52087543 52087727 -201168856 + MIR SINE MIR 45 236 -26 1955 108 6 51 chr2 52088452 52088766 -201167817 - AluSx SINE Alu -12 300 1 230 275 178 35 chr2 52088770 52089028 -201167555 + L2 LINE L2 2927 3221 -51 627 213 136 5 chr2 52089194 52089509 -201167074 - MLT1G LTR MaLR -10 580 142 1223 137 9 58 chr2 52089662 52089888 -201166695 - AluJb SINE Alu -95 217 3 254 182 0 0 chr2 52089892 52089947 -201166636 - L1M4 LINE L1 -2222 3924 3870 1817 129 106 46 chr2 52089947 52090297 -201166286 + MLT1B LTR MaLR 1 371 -19 500 309 36 16 chr2 52090316 52090568 -201166015 + ERVL LTR ERVL 3408 3664 -2100 858 249 49 27 chr2 52090786 52091011 -201165572 + MIR SINE MIR 12 241 -21 594 319 32 5 chr2 52091102 52091318 -201165265 + ERVL LTR ERVL 5193 5414 -350 304 113 16 32 chr2 52091413 52091475 -201165108 + MSTA LTR MaLR 1 61 -367 2278 97 10 10 chr2 52093115 52093423 -201163160 - AluSx SINE Alu -4 308 1 2354 80 10 0 chr2 52093424 52093723 -201162860 - AluSq SINE Alu -11 302 1 471 306 85 32 chr2 52093811 52094092 -201162491 + L2 LINE L2 2844 3139 -174 400 62 0 0 chr2 52094354 52094402 -201162181 + Alu SINE Alu 2 49 -264 983 202 29 72 chr2 52094504 52094601 -201161982 + L1M4 LINE L1 2983 3083 -3063 2192 101 0 18 chr2 52094601 52094909 -201161674 + AluSc SINE Alu 1 303 0 983 202 29 72 chr2 52094909 52095157 -201161426 + L1M4 LINE L1 3083 3314 -2832 983 114 93 52 chr2 52095164 52095265 -201161318 - Tigger1 DNA MER2_type -1 2417 2322 2145 76 58 0 chr2 52095265 52095542 -201161041 + AluSq SINE Alu 1 293 -20 983 114 93 52 chr2 52095542 52095633 -201160950 - Tigger1 DNA MER2_type -96 2322 2217 416 99 12 49 chr2 52095761 52095842 -201160741 - LTR43 LTR ERV1 -349 253 176 718 93 0 0 chr2 52095892 52095989 -201160594 - AluSx SINE Alu -11 301 205 1163 99 0 0 chr2 52095991 52096132 -201160451 - AluSx SINE Alu -166 147 7 2356 85 0 0 chr2 52096146 52096440 -201160143 - AluY SINE Alu -17 294 1 1043 183 6 11 chr2 52096440 52096615 -201159968 - FRAM SINE Alu -6 170 1 2424 80 0 0 chr2 52096619 52096919 -201159664 - AluSx SINE Alu -12 300 1 261 118 0 0 chr2 52096965 52097016 -201159567 + (TA)n Simple_repeat Simple_repeat 1 51 0 2266 85 16 10 chr2 52097157 52097462 -201159121 - AluSq SINE Alu -6 307 1 314 217 133 36 chr2 52097468 52097559 -201159024 - L1MC/D LINE L1 -2331 5477 5396 311 162 54 27 chr2 52097559 52097633 -201158950 - MER116 DNA Mariner -4 76 1 314 217 133 36 chr2 52097633 52097707 -201158876 - L1MC/D LINE L1 -2412 5396 5296 2552 62 0 7 chr2 52097739 52098044 -201158539 - AluY SINE Alu -8 303 1 342 41 0 20 chr2 52098054 52098103 -201158480 - AluY SINE Alu -253 48 1 2152 134 3 3 chr2 52098212 52098519 -201158064 - AluJb SINE Alu -5 307 1 336 200 14 0 chr2 52098533 52098603 -201157980 - L1MC4a LINE L1 -504 7304 7234 971 62 23 31 chr2 52098603 52098733 -201157850 + AluSc SINE Alu 1 129 -180 558 284 114 45 chr2 52098852 52099211 -201157372 - L1M4 LINE L1 -6095 447 64 194 238 0 0 chr2 52099284 52099333 -201157250 + MIR SINE MIR 101 150 -58 2111 117 20 10 chr2 52099385 52099683 -201156900 + AluSx SINE Alu 1 301 -11 659 125 54 9 chr2 52100218 52100330 -201156253 - AluSg/x SINE Alu -8 301 185 195 42 0 0 chr2 52101034 52101058 -201155525 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 1416 93 0 0 chr2 52101064 52101246 -201155337 - AluSg/x SINE Alu -9 301 120 21 0 0 0 chr2 52101246 52101267 -201155316 + AT_rich Low_complexity Low_complexity 1 21 0 2207 93 17 3 chr2 52101267 52101557 -201155026 - AluSp SINE Alu -19 294 1 223 314 35 0 chr2 52101766 52101852 -201154731 - MIR SINE MIR -167 95 7 32 0 0 0 chr2 52102573 52102605 -201153978 + GC_rich Low_complexity Low_complexity 1 32 0 217 217 0 0 chr2 52102879 52102925 -201153658 + CT-rich Low_complexity Low_complexity 1 46 0 180 213 106 0 chr2 52104192 52104239 -201152344 + MIR3 SINE MIR 151 202 -6 201 331 40 32 chr2 52104774 52104898 -201151685 + MIR SINE MIR 16 140 -68 223 163 47 0 chr2 52105162 52105205 -201151378 - MER5A DNA MER1_type -84 105 61 417 290 7 41 chr2 52105478 52105623 -201150960 + MIR SINE MIR 21 160 -102 4712 34 2 2 chr2 52105757 52106316 -201150267 - L1PA4 LINE L1 -3 6152 5594 2574 60 3 0 chr2 52106318 52106618 -201149965 - AluY SINE Alu -10 301 1 1926 159 33 0 chr2 52106732 52107033 -201149550 + AluJo SINE Alu 1 311 -1 292 270 119 19 chr2 52107597 52107767 -201148816 + MIR SINE MIR 15 194 -59 361 247 139 38 chr2 52108822 52108980 -201147603 + MIR SINE MIR 82 255 -7 406 225 27 27 chr2 52109038 52109149 -201147434 + MIR SINE MIR 111 221 -41 562 204 19 118 chr2 52109524 52109652 -201146931 + LTR41 LTR ERVL 530 619 -154 1971 166 3 6 chr2 52109652 52109965 -201146618 - AluJb SINE Alu 0 312 1 562 204 19 118 chr2 52109965 52110106 -201146477 + LTR41 LTR ERVL 618 772 -1 1849 175 6 34 chr2 52110120 52110440 -201146143 - AluJo SINE Alu -1 311 1 1017 89 0 0 chr2 52110466 52110589 -201145994 + AluSq/x SINE Alu 1 123 -189 494 278 84 81 chr2 52110827 52111269 -201145314 - L2 LINE L2 -16 3256 2814 182 289 22 0 chr2 52111394 52111439 -201145144 - L2 LINE L2 -24 3248 3203 * 498 226 221 21 chr2 52111435 52111625 -201144958 - MIR SINE MIR 0 262 35 309 217 43 0 chr2 52112542 52112611 -201143972 + MIR3 SINE MIR 83 154 -54 2261 119 0 0 chr2 52112620 52112915 -201143668 - AluSx SINE Alu -17 295 1 429 236 8 27 chr2 52112960 52113091 -201143492 + MIR SINE MIR 71 198 -63 246 186 147 21 chr2 52113556 52113662 -201142921 + MIR SINE MIR 99 227 -35 294 340 57 0 chr2 52113727 52113833 -201142750 + MIR SINE MIR 16 127 -81 2213 123 0 0 chr2 52114119 52114411 -201142172 - AluSg SINE Alu -18 292 1 235 189 53 42 chr2 52114412 52114507 -201142076 + MER41E LTR ERV1 358 453 -59 435 218 40 0 chr2 52114523 52114624 -201141959 + MLT1F LTR MaLR 39 143 -447 1541 163 35 42 chr2 52114632 52114813 -201141770 - AluJo SINE Alu -18 294 114 2650 118 46 22 chr2 52114813 52114851 -201141732 - MSTA LTR MaLR -4 424 388 2233 110 7 3 chr2 52114851 52115151 -201141432 + AluSx SINE Alu 1 301 -11 2650 118 46 22 chr2 52115151 52115526 -201141057 - MSTA LTR MaLR -40 388 1 1541 163 35 42 chr2 52115526 52115632 -201140951 - AluJo SINE Alu -198 114 9 1104 218 27 23 chr2 52115639 52115901 -201140682 + MLT1F LTR MaLR 160 422 -120 965 97 103 0 chr2 52116161 52116326 -201140257 + LTR47A LTR ERVL 261 442 -10 466 235 43 0 chr2 52116329 52116444 -201140139 + MLT1F LTR MaLR 448 567 0 1902 149 0 14 chr2 52116455 52116737 -201139846 + AluJo SINE Alu 1 278 -34 665 149 35 0 chr2 52116887 52117001 -201139582 + FLAM_A SINE Alu 14 131 -11 852 165 269 7 chr2 52117106 52117385 -201139198 - MLT1D LTR MaLR 0 505 154 488 207 179 14 chr2 52117390 52117535 -201139048 + MIR SINE MIR 42 210 -52 2130 112 7 13 chr2 52117554 52117896 -201138687 - AluSq SINE Alu 0 313 1 273 213 166 19 chr2 52118954 52119079 -201137504 + MIR3 SINE MIR 16 156 -52 658 198 220 0 chr2 52119139 52119316 -201137267 - MIR SINE MIR -18 244 29 1373 76 27 5 chr2 52119372 52119557 -201137026 - AluSc SINE Alu -2 307 119 1734 126 94 15 chr2 52119690 52120031 -201136552 + THE1C LTR MaLR 8 375 0 863 204 11 6 chr2 52120031 52120207 -201136376 + MER20 DNA MER1_type 37 213 -6 2225 133 99 8 chr2 52120353 52120745 -201135838 + MSTA LTR MaLR 1 428 0 1869 102 0 4 chr2 52121407 52121652 -201134931 - AluY SINE Alu -67 244 1 332 143 0 104 chr2 52121652 52121729 -201134854 + Tigger1 DNA MER2_type 2 70 -2348 1327 53 0 0 chr2 52121729 52121881 -201134702 + AluY SINE Alu 145 296 -15 2075 133 50 0 chr2 52121881 52122218 -201134365 + Tigger1 DNA MER2_type 296 649 -1769 1632 143 4 8 chr2 52122218 52122469 -201134114 + AluJb SINE Alu 1 250 -62 2882 107 25 0 chr2 52122488 52122928 -201133655 + Tigger1 DNA MER2_type 1658 2108 -310 492 280 187 0 chr2 52123311 52123493 -201133090 + MIR SINE MIR 1 216 -46 331 312 63 37 chr2 52123688 52123877 -201132706 - MIR SINE MIR -56 206 13 369 296 21 63 chr2 52124269 52124411 -201132172 - L1MC4 LINE L1 -1300 6742 6607 21 0 0 0 chr2 52125030 52125051 -201131532 + AT_rich Low_complexity Low_complexity 1 21 0 2095 95 7 11 chr2 52125679 52125988 -201130595 - AluSq SINE Alu 0 308 1 420 41 0 0 chr2 52125988 52126037 -201130546 - AluY SINE Alu -261 50 2 416 143 0 88 chr2 52126044 52126135 -201130448 - AluS SINE Alu -228 84 2 758 93 76 0 chr2 52126137 52126255 -201130328 + L1MD1 LINE L1 6108 6234 -8 1547 118 32 4 chr2 52126256 52126502 -201130081 + AluSq SINE Alu 1 253 -60 62 72 0 0 chr2 52127131 52127256 -201129327 + GC_rich Low_complexity Low_complexity 1 125 0 440 295 94 31 chr2 52127366 52127590 -201128993 - LTR16A LTR ERVL -7 443 206 2112 163 8 35 chr2 52127657 52128031 -201128552 - THE1B LTR MaLR 0 364 1 1682 103 12 0 chr2 52128031 52128284 -201128299 - THE1B-int LTR MaLR 0 1580 1325 1024 255 46 30 chr2 52128413 52128742 -201127841 - L1M4b LINE L1 -5817 1042 709 2002 124 37 10 chr2 52128750 52129048 -201127535 - AluSx SINE Alu -6 306 1 564 254 185 0 chr2 52129057 52129230 -201127353 - MIR SINE MIR -49 213 9 281 207 17 0 chr2 52129441 52129499 -201127084 - MIR SINE MIR -123 139 81 214 261 62 31 chr2 52129518 52129583 -201127000 + L2 LINE L2 3150 3216 -56 1953 124 11 7 chr2 52129587 52129895 -201126688 - AluSx SINE Alu 0 309 1 220 287 0 64 chr2 52129955 52130049 -201126534 + MIR SINE MIR 150 237 -25 214 354 63 38 chr2 52130493 52130651 -201125932 - MIR SINE MIR -48 214 53 2156 156 7 42 chr2 52131233 52131637 -201124946 + MLT1B LTR MaLR 1 390 0 523 279 98 37 chr2 52131741 52131834 -201124749 - MER112 DNA MER1_type -1 259 173 588 29 0 0 chr2 52131834 52131904 -201124679 + (AATAG)n Simple_repeat Simple_repeat 4 73 0 523 279 98 37 chr2 52131904 52132054 -201124529 - MER112 DNA MER1_type -87 173 1 266 402 0 0 chr2 52132072 52132169 -201124414 + L2 LINE L2 3173 3269 -3 979 257 84 14 chr2 52132193 52132673 -201123910 + L2 LINE L2 2553 3070 -243 2569 118 24 75 chr2 52132714 52133050 -201123533 + MSTA LTR MaLR 1 310 -118 2337 115 3 0 chr2 52133050 52133362 -201123221 - AluSp SINE Alu 0 313 1 2569 118 24 75 chr2 52133362 52133476 -201123107 + MSTA LTR MaLR 310 428 0 334 115 0 49 chr2 52133499 52133552 -201123031 + MSTC LTR MaLR 1 50 -378 414 111 0 0 chr2 52133552 52133615 -201122968 - MER4E LTR ERV1 0 779 717 293 24 49 0 chr2 52134367 52134408 -201122175 + (TTTAA)n Simple_repeat Simple_repeat 3 45 0 230 267 65 77 chr2 52134769 52135016 -201121567 - L1ME4a LINE L1 -6 6115 5872 346 272 45 0 chr2 52135233 52135339 -201121244 + MIR3 SINE MIR 75 185 -23 1332 190 91 8 chr2 52136736 52136989 -201119594 - AluJo SINE Alu -38 274 1 461 296 38 0 chr2 52137007 52137139 -201119444 - MIR3 SINE MIR -63 145 9 1026 186 0 78 chr2 52137151 52137382 -201119201 + MER58A DNA MER1_type 4 216 -8 340 257 15 12 chr2 52137875 52137973 -201118610 - MIR SINE MIR -90 118 19 1010 125 0 0 chr2 52138859 52138995 -201117588 - AluSq/x SINE Alu -176 136 1 1726 181 3 22 chr2 52139257 52139607 -201116976 + AluJo SINE Alu 3 346 0 1475 143 34 115 chr2 52139617 52139742 -201116841 + AluJo SINE Alu 6 140 -172 1998 162 13 0 chr2 52139742 52140050 -201116533 + AluSq SINE Alu 1 312 -1 1475 143 34 115 chr2 52140050 52140245 -201116338 + AluJo SINE Alu 140 300 -12 2179 114 3 28 chr2 52140245 52140562 -201116021 + AluSg SINE Alu 1 309 -1 2354 93 0 7 chr2 52140584 52140884 -201115699 + AluSx SINE Alu 1 298 -14 2480 72 3 7 chr2 52140929 52141233 -201115350 + AluY SINE Alu 1 303 -8 411 217 67 50 chr2 52141286 52141466 -201115117 + L1ME4a LINE L1 5901 6083 -38 211 182 0 0 chr2 52141479 52141512 -201115071 + L2 LINE L2 3222 3254 -18 261 262 71 36 chr2 52141892 52141976 -201114607 + MIR3 SINE MIR 13 99 -109 240 208 21 0 chr2 52142011 52142059 -201114524 + MIR SINE MIR 88 136 -72 418 241 12 0 chr2 52143439 52143522 -201113061 - MIR SINE MIR -170 92 9 417 39 0 0 chr2 52144855 52144906 -201111677 + (TC)n Simple_repeat Simple_repeat 2 52 0 31 0 0 0 chr2 52144983 52145014 -201111569 + AT_rich Low_complexity Low_complexity 1 31 0 1527 244 15 37 chr2 52145341 52145882 -201110701 + L1MC2 LINE L1 4749 5277 -869 2179 98 7 3 chr2 52145883 52146179 -201110404 + AluSx SINE Alu 1 297 -15 2138 177 22 22 chr2 52146202 52146590 -201109993 + L1MC2 LINE L1 5436 5826 -518 2278 107 3 16 chr2 52146590 52146900 -201109683 + AluSq SINE Alu 3 308 -5 2138 177 22 22 chr2 52146900 52146964 -201109619 + L1MC2 LINE L1 5825 5888 -456 2341 87 0 0 chr2 52146964 52147250 -201109333 + AluSq SINE Alu 1 286 -27 360 0 0 0 chr2 52147267 52147307 -201109276 + (CAT)n Simple_repeat Simple_repeat 2 41 0 21 36 0 0 chr2 52147357 52147385 -201109198 + AT_rich Low_complexity Low_complexity 1 28 0 625 237 5 11 chr2 52147385 52147575 -201109008 + MER20B DNA MER1_type 226 414 -369 657 204 0 0 chr2 52147576 52147718 -201108865 + L1MA4 LINE L1 6156 6297 -3 2126 111 7 7 chr2 52147725 52148014 -201108569 + AluSq SINE Alu 1 289 -24 219 88 0 0 chr2 52148024 52148058 -201108525 + (TAAAA)n Simple_repeat Simple_repeat 3 36 0 2154 103 3 7 chr2 52148092 52148383 -201108200 + AluSg SINE Alu 1 290 -20 2260 127 0 0 chr2 52148407 52148715 -201107868 + AluSx SINE Alu 1 308 -4 460 255 137 29 chr2 52148774 52149052 -201107531 + MER20B DNA MER1_type 439 746 -37 215 292 66 22 chr2 52149161 52149298 -201107285 + L2 LINE L2 2852 2994 -278 489 238 172 20 chr2 52149379 52149682 -201106901 + MER113 DNA MER1_type? 90 438 -83 371 316 26 3 chr2 52149817 52150177 -201106406 + L1M4 LINE L1 3073 3305 -2841 195 152 0 0 chr2 52150191 52150237 -201106346 + A-rich Low_complexity Low_complexity 1 46 0 2209 110 7 3 chr2 52150860 52151168 -201105415 - AluSp SINE Alu -4 309 1 2129 197 48 12 chr2 52151214 52151291 -201105292 - L1MD2 LINE L1 -12 6347 6274 1957 135 0 40 chr2 52151291 52151595 -201104988 - AluSx SINE Alu -19 293 2 2129 197 48 12 chr2 52151595 52152062 -201104521 - L1MD2 LINE L1 -85 6274 5782 375 297 139 19 chr2 52152779 52152906 -201103677 - L1ME3A LINE L1 -300 5870 5760 1996 121 3 14 chr2 52152906 52153069 -201103514 - AluSq SINE Alu -19 294 134 2285 95 7 13 chr2 52153069 52153373 -201103210 - AluSx SINE Alu -10 302 1 1996 121 3 14 chr2 52153373 52153506 -201103077 - AluSq SINE Alu -179 134 1 375 297 139 19 chr2 52153506 52153809 -201102774 - L1ME3A LINE L1 -410 5760 5388 341 243 21 116 chr2 52153843 52153905 -201102678 - L1ME3A LINE L1 -803 5343 5277 2011 148 3 3 chr2 52153905 52154208 -201102375 - AluSx SINE Alu -9 303 1 341 243 21 116 chr2 52154208 52154251 -201102332 - L1ME3A LINE L1 -869 5277 5232 1283 170 104 44 chr2 52154251 52154493 -201102090 - MER44D DNA MER2_type -1882 609 383 2189 124 0 0 chr2 52154493 52154792 -201101791 - AluSx SINE Alu -13 299 1 1283 170 104 44 chr2 52154792 52154866 -201101717 - MER44D DNA MER2_type -2108 383 4 341 243 21 116 chr2 52154866 52154905 -201101678 - L1ME3A LINE L1 -914 5232 5217 2225 85 7 7 chr2 52154905 52155198 -201101385 - AluSq SINE Alu -19 294 2 341 243 21 116 chr2 52155198 52155240 -201101343 - L1ME3A LINE L1 -929 5217 5173 1722 172 39 0 chr2 52155253 52155538 -201101045 - AluJb SINE Alu -14 298 3 24 67 0 0 chr2 52157172 52157217 -201099366 + AT_rich Low_complexity Low_complexity 1 45 0 425 333 104 0 chr2 52157345 52157537 -201099046 + MIR SINE MIR 1 212 -50 257 281 187 89 chr2 52158833 52159036 -201097547 - L2 LINE L2 -50 3222 3000 1831 163 0 0 chr2 52160217 52160522 -201096061 - AluSx SINE Alu 0 305 1 754 255 5 0 chr2 52160922 52161122 -201095461 - MLT1B LTR MaLR 0 390 190 1112 222 41 75 chr2 52161559 52161946 -201094637 + MLT1A2 LTR MaLR 1 374 0 2022 133 51 23 chr2 52162052 52162406 -201094177 + THE1B LTR MaLR 1 364 0 519 107 12 12 chr2 52162410 52162494 -201094089 + THE1B-int LTR MaLR 5 88 -1492 487 261 46 27 chr2 52162861 52163061 -201093522 + MIR SINE MIR 2 205 -57 184 273 0 0 chr2 52163536 52163580 -201093003 + L2 LINE L2 2932 2975 -339 2236 105 3 0 chr2 52163947 52164242 -201092341 - AluSg SINE Alu -14 296 1 195 42 0 0 chr2 52164869 52164893 -201091690 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 5911 57 5 0 chr2 52165118 52165904 -201090679 - L1PA7 LINE L1 -3 6151 5362 2022 115 3 3 chr2 52166408 52166694 -201089889 - AluSg SINE Alu -24 286 1 257 224 166 4 chr2 52166961 52167060 -201089523 - MIR SINE MIR -71 137 34 503 276 98 34 chr2 52167157 52167454 -201089129 - L2 LINE L2 -1 3312 2997 823 207 21 98 chr2 52167576 52167803 -201088780 + L1ME1 LINE L1 5812 6008 -158 1729 188 7 0 chr2 52167803 52168101 -201088482 + AluJo SINE Alu 1 300 -12 823 207 21 98 chr2 52168101 52168201 -201088382 + L1ME1 LINE L1 6008 6114 -52 2179 75 0 41 chr2 52168201 52168535 -201088048 - AluSx SINE Alu 0 322 1 529 169 0 97 chr2 52168535 52168593 -201087990 + L1MA10 LINE L1 6256 6318 -16 297 281 61 26 chr2 52168929 52169043 -201087540 - MIR SINE MIR -129 133 16 196 197 30 61 chr2 52169659 52169725 -201086858 + MIR SINE MIR 82 145 -63 225 319 9 9 chr2 52170729 52170842 -201085741 - MIR SINE MIR -129 133 21 2104 137 3 0 chr2 52172068 52172374 -201084209 + AluSx SINE Alu 1 307 -5 24 67 0 0 chr2 52173418 52173463 -201083120 + AT_rich Low_complexity Low_complexity 1 45 0 390 344 104 0 chr2 52173591 52173783 -201082800 + MIR SINE MIR 1 212 -50 519 280 187 0 chr2 52173956 52174138 -201082445 + MIR SINE MIR 1 216 -46 330 307 63 37 chr2 52174334 52174523 -201082060 - MIR SINE MIR -56 206 13 212 247 0 12 chr2 52174970 52175051 -201081532 + (TA)n Simple_repeat Simple_repeat 2 81 0 205 271 51 17 chr2 52175363 52175422 -201081161 - L2 LINE L2 -7 3265 3205 881 233 5 36 chr2 52175736 52175959 -201080624 - MER20 DNA MER1_type 0 219 4 816 203 23 17 chr2 52176502 52176679 -201079904 - L1PB4 LINE L1 -14 6142 5965 25 65 0 0 chr2 52176859 52176905 -201079678 + AT_rich Low_complexity Low_complexity 1 46 0 429 109 0 0 chr2 52177157 52177221 -201079362 + (TC)n Simple_repeat Simple_repeat 2 65 0 309 286 126 39 chr2 52177290 52177472 -201079111 + MIR3 SINE MIR 3 200 -8 21 0 0 0 chr2 52179388 52179409 -201077174 + AT_rich Low_complexity Low_complexity 1 21 0 1604 141 30 54 chr2 52179409 52179706 -201076877 - AluJo SINE Alu -22 290 1 1024 194 96 96 chr2 52179800 52180196 -201076387 + MSTD LTR MaLR 1 396 0 206 234 0 0 chr2 52180885 52180932 -201075651 + MIR SINE MIR 94 140 -68 180 341 0 0 chr2 52181572 52181616 -201074967 + L2 LINE L2 3213 3256 -16 24 0 0 0 chr2 52182907 52182931 -201073652 + AT_rich Low_complexity Low_complexity 1 24 0 816 228 64 5 chr2 52182970 52183172 -201073411 + MER20 DNA MER1_type 1 214 -5 757 309 51 0 chr2 52184116 52184352 -201072231 - MIR SINE MIR -5 257 10 324 276 26 0 chr2 52184674 52184750 -201071833 + MIR SINE MIR 2 79 -183 704 290 80 32 chr2 52184812 52185188 -201071395 + MLT1J2 LTR MaLR 39 432 -18 4223 80 25 9 chr2 52186883 52187507 -201069076 - L1PA7 LINE L1 -1406 4740 4104 6787 64 10 0 chr2 52187507 52188906 -201067677 + L1PA7 LINE L1 4744 6151 -3 2423 91 3 3 chr2 52189985 52190294 -201066289 - AluSp SINE Alu -4 309 1 2129 197 48 12 chr2 52190340 52190417 -201066166 - L1MD2 LINE L1 -12 6347 6274 1963 135 0 36 chr2 52190417 52190720 -201065863 - AluSx SINE Alu -19 293 2 2129 197 48 12 chr2 52190720 52191187 -201065396 - L1MD2 LINE L1 -85 6274 5782 299 229 56 50 chr2 52191771 52191950 -201064633 + L1ME4a LINE L1 5765 5944 -177 1702 143 3 35 chr2 52192006 52192293 -201064290 - AluSx SINE Alu -30 282 5 21 36 0 0 chr2 52193137 52193165 -201063418 + AT_rich Low_complexity Low_complexity 1 28 0 201 170 0 43 chr2 52193385 52193432 -201063151 - MIR SINE MIR -61 201 157 281 323 115 0 chr2 52193984 52194080 -201062503 + MIR SINE MIR 34 140 -68 30 27 0 0 chr2 52195177 52195214 -201061369 + AT_rich Low_complexity Low_complexity 1 37 0 1638 102 20 0 chr2 52195339 52195583 -201061000 - L1PA10 LINE L1 -2 6166 5918 2404 119 3 0 chr2 52196086 52196446 -201060137 + L1PA14 LINE L1 5798 6158 -3 208 281 78 0 chr2 52196744 52196808 -201059775 + MIR3 SINE MIR 116 184 -24 233 250 113 25 chr2 52197655 52197735 -201058848 - MIR3 SINE MIR -44 164 78 300 53 0 0 chr2 52198911 52198949 -201057634 + (CA)n Simple_repeat Simple_repeat 2 39 0 256 276 138 20 chr2 52200474 52200620 -201055963 - L2 LINE L2 -6 3307 3144 314 333 0 20 chr2 52200620 52200722 -201055861 + MER5B DNA MER1_type 2 101 -77 897 273 12 16 chr2 52200998 52201240 -201055343 - MLT1F LTR MaLR 0 542 302 2086 110 0 0 chr2 52201598 52201906 -201054677 + AluY SINE Alu 1 308 0 321 68 0 0 chr2 52203715 52203759 -201052824 + (TG)n Simple_repeat Simple_repeat 2 45 0 232 234 0 0 chr2 52204246 52204293 -201052290 + (CTA)n Simple_repeat Simple_repeat 1 47 0 301 288 58 102 chr2 52204298 52204524 -201052059 - MIR SINE MIR -7 255 40 219 342 25 0 chr2 52204556 52204635 -201051948 + MIR SINE MIR 64 144 -64 2251 176 90 4 chr2 52205005 52205471 -201051112 + L1MB8 LINE L1 5672 6177 -1 360 94 0 0 chr2 52205584 52205637 -201050946 + (CA)n Simple_repeat Simple_repeat 2 54 0 180 0 0 0 chr2 52206051 52206071 -201050512 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 205 252 56 9 chr2 52206138 52206245 -201050338 + (TA)n Simple_repeat Simple_repeat 1 112 0 303 93 0 0 chr2 52206257 52206300 -201050283 + (CA)n Simple_repeat Simple_repeat 2 44 0 314 341 85 23 chr2 52206852 52207028 -201049555 - MIR SINE MIR -56 206 20 386 327 74 40 chr2 52208709 52208911 -201047672 - MIR SINE MIR 0 262 54 27 49 0 0 chr2 52210165 52210206 -201046377 + AT_rich Low_complexity Low_complexity 1 41 0 202 222 0 0 chr2 52210634 52210670 -201045913 + (CATA)n Simple_repeat Simple_repeat 4 39 0 521 248 68 59 chr2 52212559 52212781 -201043802 - L2 LINE L2 -1 3312 3089 193 328 0 0 chr2 52212973 52213034 -201043549 - L3 LINE CR1 -142 1435 1375 449 328 206 17 chr2 52213112 52213637 -201042946 - L3 LINE CR1 -367 1210 587 242 268 98 62 chr2 52214194 52214306 -201042277 - MIR SINE MIR -46 216 101 23 0 0 0 chr2 52214853 52214876 -201041707 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr2 52215089 52215113 -201041470 + AT_rich Low_complexity Low_complexity 1 24 0 791 206 7 7 chr2 52215449 52215604 -201040979 + FRAM SINE Alu 1 155 -11 185 177 16 129 chr2 52217254 52217316 -201039267 - L2 LINE L2 -3 3269 3215 1517 162 0 12 chr2 52218989 52219236 -201037347 + AluJo SINE Alu 10 253 -59 618 66 79 0 chr2 52219251 52219403 -201037180 + (TA)n Simple_repeat Simple_repeat 1 164 0 305 288 143 28 chr2 52221816 52222163 -201034420 + L1MC4a LINE L1 5525 5589 -532 33 66 0 0 chr2 52222332 52222393 -201034190 + AT_rich Low_complexity Low_complexity 1 61 0 21 36 0 0 chr2 52222567 52222595 -201033988 + AT_rich Low_complexity Low_complexity 1 28 0 478 299 83 25 chr2 52223617 52223821 -201032762 + MIR SINE MIR 31 246 -16 31 0 0 0 chr2 52223941 52223972 -201032611 + AT_rich Low_complexity Low_complexity 1 31 0 507 33 0 0 chr2 52224049 52224110 -201032473 + (GA)n Simple_repeat Simple_repeat 2 62 0 186 365 49 97 chr2 52224706 52225035 -201031548 - L2 LINE L2 -15 3257 2945 409 241 12 0 chr2 52225443 52225526 -201031057 + MIR SINE MIR 9 92 -170 197 369 83 12 chr2 52225765 52225849 -201030734 + L2 LINE L2 3151 3240 -32 266 258 15 0 chr2 52225849 52225915 -201030668 + GA-rich Low_complexity Low_complexity 2 68 0 389 299 9 9 chr2 52226303 52226410 -201030173 - L2 LINE L2 -9 3304 3198 24 0 0 0 chr2 52226640 52226664 -201029919 + AT_rich Low_complexity Low_complexity 1 24 0 433 343 65 28 chr2 52226948 52227164 -201029419 - L2 LINE L2 -547 2767 2544 510 186 59 0 chr2 52227178 52227280 -201029303 + MER3 DNA MER1_type 52 159 -50 581 222 60 12 chr2 52227303 52227470 -201029113 + MER3 DNA MER1_type 2257 2431 0 648 201 65 48 chr2 52227484 52227713 -201028870 + MER3 DNA MER1_type 2345 2577 0 488 243 41 12 chr2 52227808 52227977 -201028606 - L2 LINE L2 -918 2396 2223 391 228 109 0 chr2 52229007 52229108 -201027475 + MLT1F1 LTR MaLR 441 552 -15 233 103 0 26 chr2 52231569 52231608 -201024975 - L2 LINE L2 0 3313 3276 311 232 14 0 chr2 52231621 52231690 -201024893 + L2 LINE L2 3234 3303 -10 2302 108 0 0 chr2 52231753 52232060 -201024523 - AluSc SINE Alu -2 307 1 206 240 60 0 chr2 52232512 52232562 -201024021 - L2 LINE L2 -4 3309 3257 281 183 0 14 chr2 52233358 52233429 -201023154 + CT-rich Low_complexity Low_complexity 4 73 0 2029 131 0 0 chr2 52233587 52233895 -201022688 + AluSq SINE Alu 1 308 0 21 0 0 0 chr2 52234524 52234545 -201022038 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 52235900 52235923 -201020660 + AT_rich Low_complexity Low_complexity 1 23 0 1891 157 32 24 chr2 52237151 52237521 -201019062 + THE1C LTR MaLR 1 373 -2 631 261 88 66 chr2 52237588 52237814 -201018769 + MLT2B1 LTR ERVL 177 407 -113 269 303 64 18 chr2 52238927 52239036 -201017547 - MIR SINE MIR -65 143 30 480 18 0 0 chr2 52239038 52239095 -201017488 + (TA)n Simple_repeat Simple_repeat 1 57 0 727 284 62 21 chr2 52239987 52240230 -201016353 + MIR SINE MIR 2 254 -8 21 36 0 0 chr2 52240396 52240424 -201016159 + AT_rich Low_complexity Low_complexity 1 28 0 1425 154 41 0 chr2 52242421 52242687 -201013896 + L1MA6 LINE L1 6024 6300 0 51 17 0 0 chr2 52242775 52242833 -201013750 + AT_rich Low_complexity Low_complexity 1 58 0 701 121 9 0 chr2 52244055 52244171 -201012412 + L1MA6 LINE L1 6068 6184 -116 285 274 31 4 chr2 52245135 52245256 -201011327 - MIR SINE MIR -1 207 81 2367 187 28 58 chr2 52246777 52247344 -201009239 + L1MC4a LINE L1 7256 7805 -3 1437 196 7 14 chr2 52247394 52247675 -201008908 - AluJo SINE Alu -21 291 13 1778 149 29 62 chr2 52248238 52248546 -201008037 + AluJo SINE Alu 1 298 -14 252 328 0 0 chr2 52248870 52248931 -201007652 - L2 LINE L2 -8 3305 3245 2152 130 0 0 chr2 52249003 52249311 -201007272 - AluSx SINE Alu -4 308 1 22 0 0 0 chr2 52249800 52249822 -201006761 + AT_rich Low_complexity Low_complexity 1 22 0 450 152 0 0 chr2 52250160 52250239 -201006344 - L1PA10 LINE L1 0 6168 6090 227 158 84 32 chr2 52250374 52250469 -201006114 + (TATATG)n Simple_repeat Simple_repeat 5 104 0 14182 137 6 26 chr2 52250486 52251621 -201004962 - L1PA10 LINE L1 -89 6079 4924 2235 126 3 0 chr2 52251621 52251931 -201004652 - AluSx SINE Alu 0 312 2 14182 137 6 26 chr2 52251931 52253997 -201002586 - L1PA10 LINE L1 -1244 4924 2943 1546 184 0 33 chr2 52254177 52254481 -201002102 - AluJb SINE Alu -18 294 1 21 36 0 0 chr2 52255071 52255099 -201001484 + AT_rich Low_complexity Low_complexity 1 28 0 563 330 95 14 chr2 52255984 52256278 -201000305 + MLT1J LTR MaLR 12 329 -182 300 216 0 162 chr2 52256440 52256551 -201000032 - MIR SINE MIR -89 173 81 888 187 117 0 chr2 52256803 52257012 -200999571 + MER67C LTR ERV1 88 426 -235 34 24 0 0 chr2 52257207 52257248 -200999335 + AT_rich Low_complexity Low_complexity 1 41 0 8836 122 34 14 chr2 52257270 52258701 -200997882 - Tigger1 DNA MER2_type -82 2336 877 266 354 42 0 chr2 52259561 52259657 -200996926 - MER91B DNA MER1_type 0 190 91 425 298 48 8 chr2 52259668 52259792 -200996791 - MER91B DNA MER1_type -60 130 2 231 88 0 0 chr2 52259986 52260020 -200996563 + (T)n Simple_repeat Simple_repeat 1 34 0 347 299 88 20 chr2 52261220 52261367 -200995216 + MIR3 SINE MIR 37 193 -15 420 55 0 0 chr2 52262520 52262575 -200994008 + (CA)n Simple_repeat Simple_repeat 2 56 0 220 104 42 21 chr2 52263907 52263955 -200992628 + (TA)n Simple_repeat Simple_repeat 1 49 0 21 0 0 0 chr2 52265310 52265331 -200991252 + AT_rich Low_complexity Low_complexity 1 21 0 321 26 0 0 chr2 52265333 52265371 -200991212 + (TTA)n Simple_repeat Simple_repeat 2 39 0 2208 112 0 0 chr2 52265373 52265669 -200990914 - AluSx SINE Alu -16 296 1 208 156 58 13 chr2 52265750 52265904 -200990679 + (TA)n Simple_repeat Simple_repeat 2 162 0 333 0 0 0 chr2 52265907 52265944 -200990639 + (CA)n Simple_repeat Simple_repeat 2 38 0 1792 166 10 3 chr2 52267278 52267586 -200988997 + AluSx SINE Alu 1 310 -2 345 272 45 0 chr2 52268411 52268517 -200988066 - MIR3 SINE MIR -23 185 75 317 249 52 64 chr2 52268742 52268915 -200987668 + L1ME4a LINE L1 5881 6051 -70 293 24 49 0 chr2 52269342 52269383 -200987200 + (TTAAA)n Simple_repeat Simple_repeat 3 45 0 1982 119 42 0 chr2 52270044 52270329 -200986254 - AluSx SINE Alu -15 297 1 23 33 0 0 chr2 52271074 52271104 -200985479 + AT_rich Low_complexity Low_complexity 1 30 0 412 241 123 105 chr2 52272275 52272665 -200983918 + L1MC/D LINE L1 5264 5660 -2148 6007 67 1 27 chr2 52273116 52273942 -200982641 + L1PA8 LINE L1 5362 6166 -6 23 33 0 0 chr2 52275620 52275650 -200980933 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 52275981 52276002 -200980581 + AT_rich Low_complexity Low_complexity 1 21 0 798 147 19 0 chr2 52276749 52276906 -200979677 + CT-rich Low_complexity Low_complexity 4 163 0 208 222 0 0 chr2 52276906 52276942 -200979641 + polypyrimidine Low_complexity Low_complexity 2 37 0 1583 153 78 11 chr2 52277438 52277600 -200978983 - AluSx SINE Alu -11 301 151 532 29 78 0 chr2 52277600 52277703 -200978880 + (TA)n Simple_repeat Simple_repeat 2 112 0 1583 153 78 11 chr2 52277703 52277822 -200978761 - AluSx SINE Alu -161 151 1 2177 79 0 0 chr2 52279385 52279665 -200976918 + AluY SINE Alu 19 298 -13 383 303 97 7 chr2 52279847 52279992 -200976591 + MIR SINE MIR 27 184 -78 27 0 0 0 chr2 52280358 52280385 -200976198 + AT_rich Low_complexity Low_complexity 1 27 0 2304 37 3 47 chr2 52280393 52280692 -200975891 + AluY SINE Alu 1 286 -25 401 378 29 10 chr2 52281497 52281701 -200974882 - L2 LINE L2 -437 2877 2670 1072 244 0 33 chr2 52281739 52281981 -200974602 - MER8 DNA MER2_type 0 239 6 197 284 12 49 chr2 52282326 52282407 -200974176 + MIR SINE MIR 88 165 -97 205 304 89 0 chr2 52282424 52282503 -200974080 + L2 LINE L2 3197 3282 -31 189 0 0 0 chr2 52283270 52283291 -200973292 + (CAAAA)n Simple_repeat Simple_repeat 1 21 0 25 65 0 0 chr2 52284107 52284153 -200972430 + AT_rich Low_complexity Low_complexity 1 46 0 4526 151 57 17 chr2 52284183 52285015 -200971568 - MER6 DNA MER2_type 0 865 1 2342 162 43 32 chr2 52285376 52285907 -200970676 - L1MA8 LINE L1 -3 6288 5752 1102 216 24 0 chr2 52287578 52287791 -200968792 + MER20 DNA MER1_type 1 218 -1 2450 114 8 0 chr2 52287848 52288208 -200968375 - THE1B LTR MaLR 0 364 2 22 0 0 0 chr2 52289078 52289100 -200967483 + AT_rich Low_complexity Low_complexity 1 22 0 1170 234 62 0 chr2 52291454 52291775 -200964808 + MER58B DNA MER1_type 1 341 0 405 258 141 62 chr2 52292019 52292275 -200964308 - MARNA DNA Mariner -26 560 285 188 173 39 39 chr2 52292283 52292335 -200964248 + L2 LINE L2 3258 3309 -4 242 281 187 89 chr2 52293861 52294064 -200962519 - L2 LINE L2 -50 3222 3000 461 191 42 0 chr2 52295746 52295889 -200960694 - L1PB4 LINE L1 -12 6144 5930 267 31 0 0 chr2 52295889 52295921 -200960662 + (TTA)n Simple_repeat Simple_repeat 1 32 0 1049 221 23 18 chr2 52295921 52296138 -200960445 - AluJo SINE Alu -94 218 1 1125 131 35 20 chr2 52296138 52296241 -200960342 - L1PB4 LINE L1 -221 5935 5835 2169 110 3 28 chr2 52296241 52296559 -200960024 - AluSg SINE Alu 0 310 1 1125 131 35 20 chr2 52296559 52296654 -200959929 - L1PB4 LINE L1 -321 5835 5734 182 296 83 46 chr2 52296750 52296858 -200959725 - MIR SINE MIR -70 192 81 21 0 0 0 chr2 52297070 52297091 -200959492 + AT_rich Low_complexity Low_complexity 1 21 0 188 349 120 38 chr2 52297130 52297339 -200959244 - L2 LINE L2 -212 3101 2876 35 41 0 0 chr2 52297413 52297462 -200959121 + AT_rich Low_complexity Low_complexity 1 49 0 21 0 0 0 chr2 52298779 52298800 -200957783 + AT_rich Low_complexity Low_complexity 1 21 0 856 285 116 33 chr2 52299823 52300068 -200956515 + MLT1J LTR MaLR 1 224 -287 2161 117 0 0 chr2 52300068 52300366 -200956217 - AluSx SINE Alu -14 298 1 856 285 116 33 chr2 52300366 52300544 -200956039 + MLT1J LTR MaLR 224 459 -52 483 258 211 24 chr2 52300581 52300790 -200955793 - MIR SINE MIR 0 262 15 21 0 0 0 chr2 52301413 52301434 -200955149 + AT_rich Low_complexity Low_complexity 1 21 0 366 123 0 0 chr2 52302283 52302340 -200954243 + (TCCA)n Simple_repeat Simple_repeat 3 59 0 2002 104 4 0 chr2 52304183 52304453 -200952130 + AluSg SINE Alu 3 273 -37 2277 101 3 0 chr2 52306354 52306652 -200949931 - AluSg SINE Alu -11 299 1 1089 182 50 86 chr2 52307333 52307695 -200948888 - L1MA9 LINE L1 -33 6279 5931 1125 180 9 95 chr2 52307696 52308013 -200948570 - AluJo SINE Alu -11 301 12 519 185 65 0 chr2 52308033 52308141 -200948442 - L1MA9 LINE L1 -348 5943 5829 455 300 79 46 chr2 52308148 52308388 -200948195 + MIR SINE MIR 10 257 -5 254 266 257 9 chr2 52308705 52308818 -200947765 + MIR3 SINE MIR 38 178 -30 287 239 34 34 chr2 52314217 52314305 -200942278 + MIR3 SINE MIR 92 179 -29 400 281 93 31 chr2 52316480 52317099 -200939484 + L1ME3A LINE L1 1065 1745 -4565 981 262 88 33 chr2 52317453 52318090 -200938493 + L1ME3A LINE L1 5245 5934 -219 446 0 0 18 chr2 52319654 52319709 -200936874 + (TA)n Simple_repeat Simple_repeat 2 55 0 22 0 0 0 chr2 52321171 52321193 -200935390 + AT_rich Low_complexity Low_complexity 1 22 0 240 344 84 23 chr2 52321211 52321342 -200935241 - MIR SINE MIR -5 257 119 864 225 11 5 chr2 52322561 52322748 -200933835 - MER5A DNA MER1_type -1 188 1 248 184 20 0 chr2 52322819 52322868 -200933715 + L2 LINE L2 3264 3313 0 198 0 0 0 chr2 52322946 52322968 -200933615 + (TA)n Simple_repeat Simple_repeat 1 22 0 242 372 154 4 chr2 52323520 52323754 -200932829 - L2 LINE L2 -650 2664 2396 405 269 15 30 chr2 52323764 52323898 -200932685 + MER69 DNA AcHobo 2 133 -2393 1285 57 6 0 chr2 52323901 52324084 -200932499 - AluY SINE Alu 0 316 133 261 241 13 38 chr2 52324119 52324198 -200932385 + MER69 DNA AcHobo 172 248 -978 * 271 244 44 22 chr2 52324192 52324282 -200932301 + MER69 DNA AcHobo 2435 2526 0 207 347 69 46 chr2 52324417 52324679 -200931904 - L2 LINE L2 -1112 2202 1935 224 281 263 21 chr2 52324876 52325006 -200931577 - MIR3 SINE MIR -97 111 6 1896 264 57 19 chr2 52326245 52326930 -200929653 + L1ME2 LINE L1 5451 6161 -3 243 88 0 0 chr2 52326982 52327016 -200929567 + (TCCC)n Simple_repeat Simple_repeat 4 37 0 2121 120 10 0 chr2 52327023 52327324 -200929259 - AluSx SINE Alu -8 304 1 1410 109 59 14 chr2 52327484 52327704 -200928879 - MER30 DNA MER1_type 0 230 1 2016 129 7 10 chr2 52327830 52328133 -200928450 + AluSg SINE Alu 1 302 -8 425 246 99 44 chr2 52328405 52328730 -200927853 + L1ME4a LINE L1 5106 5441 -748 360 0 0 0 chr2 52328954 52328994 -200927589 + (TG)n Simple_repeat Simple_repeat 2 41 0 * 513 0 0 0 chr2 52328993 52329050 -200927533 + (TA)n Simple_repeat Simple_repeat 2 58 0 2059 138 0 0 chr2 52329050 52329347 -200927236 - AluSg SINE Alu -13 297 1 269 301 142 25 chr2 52329365 52329690 -200926893 + L1ME4a LINE L1 5728 6090 -31 493 324 16 27 chr2 52331229 52331414 -200925169 + MER5A DNA MER1_type 4 186 -3 243 280 42 77 chr2 52332568 52332736 -200923847 + MIR SINE MIR 14 175 -87 232 189 0 57 chr2 52333448 52333501 -200923082 + LTR16B LTR ERVL 105 154 -310 213 94 0 0 chr2 52333568 52333600 -200922983 + (TA)n Simple_repeat Simple_repeat 2 33 0 211 182 0 0 chr2 52333628 52333661 -200922922 + (CA)n Simple_repeat Simple_repeat 2 34 0 253 252 206 8 chr2 52335341 52335472 -200921111 - MIR SINE MIR -31 231 75 183 235 0 0 chr2 52336411 52336445 -200920138 + MIR SINE MIR 1 34 -228 2327 96 3 6 chr2 52336446 52336760 -200919823 - AluSp SINE Alu 0 313 1 876 272 26 4 chr2 52336760 52336988 -200919595 + MIR SINE MIR 20 252 -10 34 84 0 0 chr2 52337133 52337216 -200919367 + AT_rich Low_complexity Low_complexity 1 83 0 252 320 94 8 chr2 52339433 52339561 -200917022 + MIR SINE MIR 69 207 -55 261 159 0 0 chr2 52340044 52340088 -200916495 - L3b LINE CR1 -12 1571 1528 377 311 16 33 chr2 52340489 52340611 -200915972 + MIR3 SINE MIR 37 156 -52 346 293 26 26 chr2 52340609 52340725 -200915858 - MIR SINE MIR -60 148 33 * 226 304 205 18 chr2 52340789 52340960 -200915623 - MIR SINE MIR -15 247 45 282 29 0 0 chr2 52346247 52346282 -200910301 + (CCG)n Simple_repeat Simple_repeat 1 35 0 219 139 0 0 chr2 52347107 52347143 -200909440 + (A)n Simple_repeat Simple_repeat 1 36 0 236 346 59 44 chr2 52348880 52349016 -200907567 + MIR3 SINE MIR 5 142 -66 2590 211 58 9 chr2 52349374 52349943 -200906640 + MER82 DNA MER2_type 1 597 -56 360 194 139 9 chr2 52351028 52351136 -200905447 - MIR SINE MIR 0 262 141 22 0 0 0 chr2 52351867 52351889 -200904694 + AT_rich Low_complexity Low_complexity 1 22 0 422 0 0 36 chr2 52352130 52352185 -200904398 + (TAA)n Simple_repeat Simple_repeat 3 55 0 289 338 90 8 chr2 52352812 52352945 -200903638 + MIR SINE MIR 6 149 -113 593 191 93 68 chr2 52353200 52353362 -200903221 - MER5A DNA MER1_type -2 187 22 703 227 141 30 chr2 52353686 52353884 -200902699 + MIR SINE MIR 13 232 -30 312 27 0 0 chr2 52353927 52353964 -200902619 + (TA)n Simple_repeat Simple_repeat 1 37 0 379 100 29 0 chr2 52354610 52354680 -200901903 + (TA)n Simple_repeat Simple_repeat 2 73 0 219 292 40 82 chr2 52354760 52355008 -200901575 + L2 LINE L2 2755 2985 -287 1100 234 64 14 chr2 52356374 52356656 -200899927 + AluJo SINE Alu 3 298 -4 2262 99 3 0 chr2 52356662 52356982 -200899601 - AluSp SINE Alu 0 323 3 29869 118 13 61 chr2 52357160 52363626 -200892957 + L1PA7 LINE L1 9 6150 -4 216 179 0 0 chr2 52364324 52364363 -200892220 + A-rich Low_complexity Low_complexity 2 40 0 23 33 0 0 chr2 52365607 52365637 -200890946 + AT_rich Low_complexity Low_complexity 1 30 0 427 311 47 27 chr2 52366088 52366354 -200890229 + MLT1J LTR MaLR 242 615 0 306 261 0 0 chr2 52366840 52366905 -200889678 - L2 LINE L2 0 3313 3249 460 300 172 47 chr2 52367676 52368212 -200888371 + L3 LINE CR1 792 1394 -183 207 343 14 29 chr2 52369706 52369776 -200886807 - MER5A DNA MER1_type -87 102 34 191 239 22 0 chr2 52369788 52369834 -200886749 + L2 LINE L2 3215 3261 -11 28 48 0 0 chr2 52371143 52371185 -200885398 + AT_rich Low_complexity Low_complexity 1 42 0 482 300 140 51 chr2 52371185 52371635 -200884948 - L3 LINE CR1 -35 1542 1053 342 0 0 0 chr2 52372672 52372710 -200883873 + (TTA)n Simple_repeat Simple_repeat 2 39 0 954 68 20 7 chr2 52372960 52373108 -200883475 + (GAAA)n Simple_repeat Simple_repeat 1 150 0 1421 160 62 29 chr2 52373395 52373719 -200882864 + AluJo SINE Alu 1 333 0 486 311 54 29 chr2 52374662 52374903 -200881680 - MIR SINE MIR -13 249 3 225 178 0 0 chr2 52375404 52375449 -200881134 + (CATA)n Simple_repeat Simple_repeat 4 48 0 236 274 29 78 chr2 52376146 52376248 -200880335 - MIR3 SINE MIR -7 201 105 273 119 0 0 chr2 52376307 52376349 -200880234 + (TTTTC)n Simple_repeat Simple_repeat 2 43 0 327 226 20 0 chr2 52376364 52376466 -200880117 - L1M LINE L1 -758 5420 5317 3027 107 9 7 chr2 52376478 52376918 -200879665 - L1PA10 LINE L1 -13 6155 5715 1460 190 66 11 chr2 52377672 52378018 -200878565 - MER47B DNA MER2_type 0 418 1 366 297 40 0 chr2 52378351 52378452 -200878131 + L2 LINE L2 3209 3313 0 209 264 19 0 chr2 52378476 52378529 -200878054 + GA-rich Low_complexity Low_complexity 2 55 0 186 43 0 0 chr2 52378916 52378939 -200877644 + (GA)n Simple_repeat Simple_repeat 2 24 0 276 30 0 0 chr2 52379654 52379687 -200876896 + (TG)n Simple_repeat Simple_repeat 2 34 0 494 285 192 5 chr2 52379863 52380077 -200876506 + MIR SINE MIR 6 259 -3 187 318 0 45 chr2 52380238 52380304 -200876279 - L2 LINE L2 -11 3302 3240 264 339 183 0 chr2 52380396 52380511 -200876072 + L2 LINE L2 3137 3272 0 459 0 0 0 chr2 52380900 52380951 -200875632 + (CA)n Simple_repeat Simple_repeat 2 52 0 602 75 0 0 chr2 52381042 52381122 -200875461 + MADE1 DNA Mariner 1 80 0 574 133 0 0 chr2 52382845 52382935 -200873648 - L1MA6 LINE L1 0 6300 6211 236 350 104 33 chr2 52383016 52383199 -200873384 + MIR3 SINE MIR 13 208 0 2337 106 0 6 chr2 52383602 52383913 -200872670 + AluSc SINE Alu 1 309 0 316 263 0 13 chr2 52385120 52385196 -200871387 + L3 LINE CR1 630 704 -873 28 0 0 0 chr2 52385250 52385278 -200871305 + AT_rich Low_complexity Low_complexity 1 28 0 259 250 0 12 chr2 52385368 52385452 -200871131 + (TA)n Simple_repeat Simple_repeat 1 83 0 445 304 5 49 chr2 52385614 52385798 -200870785 + L3 LINE CR1 803 978 -599 1071 185 18 22 chr2 52388347 52388574 -200868009 + AluJb SINE Alu 86 311 -1 1844 168 66 31 chr2 52389920 52390301 -200866282 + MSTD LTR MaLR 1 394 -2 458 239 0 0 chr2 52392215 52392303 -200864280 + FLAM_A SINE Alu 1 88 -54 22 0 0 0 chr2 52392543 52392565 -200864018 + AT_rich Low_complexity Low_complexity 1 22 0 1837 307 92 36 chr2 52393353 52394627 -200861956 + L2 LINE L2 1964 3313 0 463 294 102 25 chr2 52395008 52395205 -200861378 - MIR SINE MIR -1 261 50 251 239 84 0 chr2 52396812 52396883 -200859700 - MIR SINE MIR -57 205 129 197 162 0 0 chr2 52396885 52396922 -200859661 - MIR SINE MIR -99 163 127 585 0 0 0 chr2 52399168 52399233 -200857350 + (A)n Simple_repeat Simple_repeat 1 65 0 29 0 0 0 chr2 52399262 52399291 -200857292 + AT_rich Low_complexity Low_complexity 1 29 0 180 0 0 0 chr2 52401119 52401139 -200855444 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 551 247 160 20 chr2 52402692 52402842 -200853741 + MER5A DNA MER1_type 18 188 -1 247 25 50 0 chr2 52403546 52403586 -200852997 + (TTG)n Simple_repeat Simple_repeat 1 42 0 228 327 135 10 chr2 52405046 52405150 -200851433 + MIR3 SINE MIR 2 118 -90 765 312 13 9 chr2 52405214 52405445 -200851138 - MIR SINE MIR 0 262 31 24 67 0 0 chr2 52406467 52406512 -200850071 + AT_rich Low_complexity Low_complexity 1 45 0 2600 134 39 12 chr2 52406855 52407265 -200849318 + MSTC LTR MaLR 3 423 -5 309 301 257 5 chr2 52407688 52407894 -200848689 - MIR SINE MIR -2 260 3 243 133 0 0 chr2 52408028 52408073 -200848510 + (TG)n Simple_repeat Simple_repeat 2 46 0 342 0 0 0 chr2 52408218 52408256 -200848327 + (TC)n Simple_repeat Simple_repeat 1 38 0 211 286 33 33 chr2 52409345 52409436 -200847147 + L2 LINE L2 2811 2901 -371 213 39 0 0 chr2 52409960 52409986 -200846597 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 33 0 0 23 chr2 52410394 52410407 -200846176 + AT_rich Low_complexity Low_complexity 1 13 -30 9615 73 60 4 chr2 52410407 52411713 -200844870 + SVA Other Other 8 1386 0 33 0 0 23 chr2 52411713 52411743 -200844840 + AT_rich Low_complexity Low_complexity 13 43 0 21 0 0 0 chr2 52412040 52412061 -200844522 + AT_rich Low_complexity Low_complexity 1 21 0 2640 173 3 10 chr2 52412149 52412745 -200843838 + L1 LINE L1 4833 5422 -743 6403 81 25 29 chr2 52412746 52413709 -200842874 + L1MA1 LINE L1 5336 6294 -8 236 111 0 0 chr2 52413801 52413846 -200842737 + L1MA3 LINE L1 6256 6300 -5 712 309 50 30 chr2 52415373 52415710 -200840873 - L2 LINE L2 0 3313 2970 2531 96 22 0 chr2 52415920 52416283 -200840300 - THE1C LTR MaLR 0 375 5 340 323 68 65 chr2 52416899 52417147 -200839436 - L2 LINE L2 -32 3240 2992 202 356 0 0 chr2 52417352 52417411 -200839172 - L2 LINE L2 -566 2748 2690 24 0 0 0 chr2 52418186 52418210 -200838373 + AT_rich Low_complexity Low_complexity 1 24 0 315 256 12 12 chr2 52418944 52419030 -200837553 + GA-rich Low_complexity Low_complexity 1 86 0 342 115 0 0 chr2 52419760 52419812 -200836771 + (CA)n Simple_repeat Simple_repeat 2 53 0 328 312 32 8 chr2 52420192 52420317 -200836266 + MER94 DNA DNA 1 128 -6 513 0 0 0 chr2 52420342 52420399 -200836184 + (TG)n Simple_repeat Simple_repeat 2 58 0 21 0 0 0 chr2 52421281 52421302 -200835281 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 52421782 52421803 -200834780 + AT_rich Low_complexity Low_complexity 1 21 0 524 297 140 29 chr2 52422968 52423318 -200833265 - L2 LINE L2 -4 3309 2921 222 230 220 20 chr2 52423372 52423472 -200833111 - L2 LINE L2 -479 2835 2716 595 138 9 9 chr2 52423491 52423607 -200832976 + GA-rich Low_complexity Low_complexity 3 118 0 342 203 0 0 chr2 52423746 52423874 -200832709 + G-rich Low_complexity Low_complexity 1 128 0 734 136 0 22 chr2 52423875 52424059 -200832524 + (G)n Simple_repeat Simple_repeat 1 180 0 297 268 21 35 chr2 52424059 52424275 -200832308 + G-rich Low_complexity Low_complexity 1 212 0 511 110 0 22 chr2 52424418 52424509 -200832074 + (GGA)n Simple_repeat Simple_repeat 2 90 0 1782 159 3 7 chr2 52428293 52428588 -200827995 + AluJo SINE Alu 1 294 -18 367 226 139 29 chr2 52428921 52429058 -200827525 - MIR SINE MIR -43 219 68 2129 132 0 0 chr2 52429418 52429713 -200826870 - AluSx SINE Alu -12 300 6 839 166 95 6 chr2 52430528 52430697 -200825886 + MER3 DNA MER1_type 1 184 -25 981 233 41 96 chr2 52431633 52431976 -200824607 + MER58B DNA MER1_type 18 341 0 320 314 109 6 chr2 52432064 52432220 -200824363 - MIR SINE MIR -3 259 88 434 325 13 0 chr2 52433306 52433460 -200823123 + MLT1L LTR MaLR 437 592 -23 21 0 0 0 chr2 52433719 52433740 -200822843 + AT_rich Low_complexity Low_complexity 1 21 0 342 243 0 0 chr2 52433838 52433941 -200822642 + GA-rich Low_complexity Low_complexity 2 104 0 2319 50 0 77 chr2 52434206 52434543 -200822040 - AluY SINE Alu 0 311 1 21 36 0 0 chr2 52434817 52434845 -200821738 + AT_rich Low_complexity Low_complexity 1 28 0 234 236 182 49 chr2 52435305 52435483 -200821100 + MIR3 SINE MIR 12 204 -58 22 0 0 0 chr2 52435503 52435525 -200821058 + AT_rich Low_complexity Low_complexity 1 22 0 1687 121 0 0 chr2 52435651 52435890 -200820693 - L1P4 LINE L1 -356 5809 5571 1710 111 4 0 chr2 52435890 52436136 -200820447 + L1PA15 LINE L1 5912 6165 0 212 303 13 0 chr2 52436138 52436214 -200820369 - MIR3 SINE MIR -45 163 87 2178 103 7 3 chr2 52436333 52436633 -200819950 + AluSp SINE Alu 1 301 -12 198 0 0 0 chr2 52437870 52437892 -200818691 + (TG)n Simple_repeat Simple_repeat 1 22 0 2446 63 0 35 chr2 52439686 52440001 -200816582 + AluY SINE Alu 1 304 -7 207 0 0 0 chr2 52440563 52440586 -200815997 + (TTA)n Simple_repeat Simple_repeat 2 24 0 386 329 110 14 chr2 52440588 52440807 -200815776 - L2 LINE L2 -63 3250 3011 25 0 0 0 chr2 52441495 52441520 -200815063 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr2 52441565 52441586 -200814997 + AT_rich Low_complexity Low_complexity 1 21 0 657 250 34 0 chr2 52442246 52442394 -200814189 + MIR SINE MIR 8 160 -102 957 321 112 40 chr2 52442600 52443443 -200813140 - L2 LINE L2 -858 2456 1554 345 322 20 27 chr2 52443677 52443823 -200812760 + MIR3 SINE MIR 9 153 -55 1816 158 40 44 chr2 52444743 52445148 -200811435 - MER96B DNA MER1_type? -3 414 12 210 263 40 79 chr2 52445705 52445781 -200810802 + L2 LINE L2 3182 3254 -59 289 238 116 138 chr2 52446254 52446435 -200810148 - MER91B DNA MER1_type -13 177 1 265 246 0 18 chr2 52446480 52446590 -200809993 + CT-rich Low_complexity Low_complexity 2 109 0 * 926 113 5 38 chr2 52446570 52446756 -200809827 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 252 176 121 11 chr2 52446906 52446997 -200809586 + L1ME4a LINE L1 6020 6120 -1 2198 122 0 19 chr2 52447355 52447667 -200808916 + AluSx SINE Alu 3 308 -4 195 42 0 0 chr2 52447707 52447731 -200808852 + (TA)n Simple_repeat Simple_repeat 2 25 0 378 0 0 0 chr2 52447899 52447941 -200808642 + (TA)n Simple_repeat Simple_repeat 1 42 0 30 27 0 0 chr2 52449021 52449058 -200807525 + AT_rich Low_complexity Low_complexity 1 37 0 223 269 0 45 chr2 52449530 52449597 -200806986 + L2 LINE L2 3021 3084 -188 448 223 159 38 chr2 52449622 52449779 -200806804 - MER5A DNA MER1_type 0 189 14 367 88 18 0 chr2 52449782 52449839 -200806744 - L1PA16 LINE L1 -9 6157 6100 526 296 31 6 chr2 52450029 52450188 -200806395 - MIR SINE MIR -74 188 26 290 301 0 73 chr2 52450511 52450634 -200805949 - L2 LINE L2 0 3313 3200 199 337 139 10 chr2 52450642 52450743 -200805840 + L2 LINE L2 3182 3295 -18 1580 168 47 7 chr2 52451156 52451430 -200805153 - AluJb SINE Alu -27 285 1 456 237 35 0 chr2 52452541 52452655 -200803928 - MIR3 SINE MIR -8 200 83 715 274 11 5 chr2 52453349 52453535 -200803048 - MER5A DNA MER1_type -1 188 2 1976 125 7 0 chr2 52454207 52454511 -200802072 + AluSx SINE Alu 1 306 0 360 0 0 0 chr2 52454826 52454866 -200801717 + (CA)n Simple_repeat Simple_repeat 1 40 0 220 375 62 0 chr2 52457565 52457661 -200798922 + MIR SINE MIR 20 121 -141 5092 151 60 36 chr2 52457661 52458744 -200797839 + L1MA4 LINE L1 5182 6291 -9 2116 125 7 7 chr2 52458744 52459040 -200797543 - AluSq SINE Alu -16 297 2 28 48 0 0 chr2 52459306 52459348 -200797235 + AT_rich Low_complexity Low_complexity 1 42 0 2575 146 14 5 chr2 52459472 52459912 -200796671 - L1PA14 LINE L1 -3 6158 5715 249 185 37 0 chr2 52461776 52461830 -200794753 + MIR SINE MIR 195 250 -12 225 196 0 0 chr2 52467815 52467871 -200788712 + (TAA)n Simple_repeat Simple_repeat 1 56 0 445 300 67 0 chr2 52468857 52469007 -200787576 + MIR SINE MIR 47 206 -56 859 256 6 6 chr2 52469233 52469405 -200787178 + MER5A DNA MER1_type 11 182 -7 23 0 0 0 chr2 52470338 52470361 -200786222 + AT_rich Low_complexity Low_complexity 1 23 0 2939 155 2 4 chr2 52471266 52471762 -200784821 - L1PB3 LINE L1 0 6154 5660 1917 122 0 3 chr2 52471764 52472060 -200784523 + L1PA13 LINE L1 5865 6159 -4 321 26 0 0 chr2 52472180 52472218 -200784365 + (CAAAAA)n Simple_repeat Simple_repeat 1 38 0 22 56 0 0 chr2 52472717 52472753 -200783830 + AT_rich Low_complexity Low_complexity 1 36 0 325 359 35 18 chr2 52472912 52472957 -200783626 + MIR SINE MIR 47 90 -172 315 0 0 0 chr2 52472957 52472992 -200783591 + (TG)n Simple_repeat Simple_repeat 2 36 0 325 359 35 18 chr2 52472992 52473116 -200783467 + MIR SINE MIR 90 219 -43 717 306 79 0 chr2 52473810 52474026 -200782557 + LTR40a LTR ERVL 263 495 -24 190 310 150 20 chr2 52474039 52474139 -200782444 - MIR SINE MIR -57 151 39 207 0 0 0 chr2 52474845 52474868 -200781715 + (A)n Simple_repeat Simple_repeat 1 23 0 530 272 49 49 chr2 52476464 52476697 -200779886 + MIR SINE MIR 8 233 -29 2366 103 3 0 chr2 52479923 52480234 -200776349 - AluSx SINE Alu 0 312 1 2800 6 0 10 chr2 52481918 52482229 -200774354 - AluYa5 SINE Alu -3 308 1 1142 125 10 26 chr2 52482786 52482978 -200773605 + MER41B LTR ERV1 3 191 -444 377 102 0 6 chr2 52482978 52483033 -200773550 + AluJ/FLAM SINE Alu 4 52 -250 1547 89 0 0 chr2 52483033 52483235 -200773348 + AluSg/x SINE Alu 104 305 -7 2840 136 0 16 chr2 52483244 52483692 -200772891 + MER41B LTR ERV1 195 635 0 349 331 40 57 chr2 52483694 52483869 -200772714 - MIR SINE MIR -56 206 35 446 297 52 19 chr2 52485175 52485330 -200771253 + MIR SINE MIR 47 206 -56 29 0 0 0 chr2 52486177 52486206 -200770377 + AT_rich Low_complexity Low_complexity 1 29 0 337 259 36 45 chr2 52487199 52487311 -200769272 + MIR SINE MIR 94 204 -58 210 71 0 0 chr2 52487348 52487376 -200769207 + (ATGGTG)n Simple_repeat Simple_repeat 5 32 0 251 337 10 10 chr2 52487377 52487475 -200769108 - MIR SINE MIR -160 102 5 253 262 65 37 chr2 52489693 52489800 -200766783 + MIR3 SINE MIR 93 202 -6 190 295 141 13 chr2 52492108 52492186 -200764397 + MIR SINE MIR 169 256 -6 215 302 28 72 chr2 52493073 52493226 -200763357 - MER5B DNA MER1_type -44 134 3 2168 114 7 0 chr2 52494912 52495210 -200761373 + AluSx SINE Alu 1 300 -12 635 0 13 0 chr2 52495507 52495582 -200761001 + (TG)n Simple_repeat Simple_repeat 2 77 0 224 337 65 12 chr2 52498995 52499164 -200757419 - L3 LINE CR1 -817 760 583 2431 68 0 0 chr2 52499835 52500128 -200756455 + AluSx SINE Alu 9 301 -11 206 379 53 23 chr2 52501024 52501156 -200755427 - L2 LINE L2 -1 3271 3136 360 43 0 0 chr2 52501542 52501588 -200754995 + (TG)n Simple_repeat Simple_repeat 2 47 0 197 362 141 6 chr2 52501605 52501768 -200754815 - L2 LINE L2 -708 2606 2422 462 79 0 0 chr2 52502352 52502415 -200754168 + (GGAA)n Simple_repeat Simple_repeat 2 64 0 312 111 0 0 chr2 52502605 52502659 -200753924 + (CA)n Simple_repeat Simple_repeat 2 55 0 2117 224 50 124 chr2 52502709 52503187 -200753396 + L1MC4 LINE L1 6397 6909 -1133 2137 151 0 0 chr2 52503187 52503499 -200753084 + AluSx SINE Alu 1 312 0 2117 224 50 124 chr2 52503499 52504718 -200751865 + L1MC4 LINE L1 6909 8039 -3 237 276 0 26 chr2 52505452 52505528 -200751055 + MIR SINE MIR 97 170 -92 285 198 33 0 chr2 52506841 52506932 -200749651 + GA-rich Low_complexity Low_complexity 2 95 0 180 0 0 0 chr2 52507798 52507818 -200748765 + (A)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr2 52507847 52507868 -200748715 + AT_rich Low_complexity Low_complexity 1 21 0 208 308 0 13 chr2 52508122 52508200 -200748383 + GA-rich Low_complexity Low_complexity 2 78 0 281 259 22 86 chr2 52509236 52509375 -200747208 - MIR SINE MIR -68 140 11 180 340 93 10 chr2 52509378 52509475 -200747108 + MIR3 SINE MIR 79 183 -25 231 330 22 11 chr2 52509664 52509755 -200746828 + MIR3 SINE MIR 102 193 -15 1384 203 58 39 chr2 52509963 52510327 -200746256 + MLT1A2 LTR MaLR 4 374 0 2264 110 0 0 chr2 52510367 52510675 -200745908 + AluSg SINE Alu 1 308 -2 299 305 133 20 chr2 52511059 52511210 -200745373 - MIR3 SINE MIR -10 198 31 1831 133 23 23 chr2 52511218 52511518 -200745065 - AluSg SINE Alu -10 300 1 183 129 0 0 chr2 52511908 52511939 -200744644 + (TG)n Simple_repeat Simple_repeat 1 31 0 291 327 50 0 chr2 52512120 52512221 -200744362 + MIR SINE MIR 39 144 -64 453 317 55 15 chr2 52513165 52513367 -200743216 + MIR SINE MIR 47 256 -6 180 337 233 0 chr2 52514615 52514701 -200741882 - L2 LINE L2 -20 3293 3188 802 263 27 0 chr2 52514703 52514889 -200741694 - MER58A DNA MER1_type 0 224 34 195 333 20 0 chr2 52515006 52515057 -200741526 + MIR SINE MIR 42 93 -115 3007 161 34 0 chr2 52515141 52515649 -200740934 + MER1A DNA MER1_type 3 527 0 378 0 0 0 chr2 52515762 52515804 -200740779 + (TG)n Simple_repeat Simple_repeat 2 43 0 597 254 71 24 chr2 52516349 52516518 -200740065 - MER45A DNA AcHobo 0 178 2 409 242 21 0 chr2 52517175 52517270 -200739313 + MIR SINE MIR 40 136 -126 240 240 0 0 chr2 52517498 52517548 -200739035 + L2 LINE L2 3216 3265 -7 22 0 0 0 chr2 52518810 52518832 -200737751 + AT_rich Low_complexity Low_complexity 1 22 0 321 301 0 11 chr2 52522174 52522267 -200734316 + GA-rich Low_complexity Low_complexity 1 92 0 2271 92 3 10 chr2 52522882 52523196 -200733387 - AluSx SINE Alu 0 312 1 2009 129 0 0 chr2 52524361 52524685 -200731898 + AluSx SINE Alu 4 327 0 22 35 0 0 chr2 52527638 52527667 -200728916 + AT_rich Low_complexity Low_complexity 1 29 0 22 56 0 0 chr2 52527711 52527747 -200728836 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr2 52530599 52530620 -200725963 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr2 52531205 52531231 -200725352 + AT_rich Low_complexity Low_complexity 1 26 0 1233 180 22 22 chr2 52532007 52532274 -200724309 - AluJo SINE Alu -8 304 38 263 320 70 16 chr2 52532330 52532458 -200724125 + MIR3 SINE MIR 71 205 -3 604 278 132 88 chr2 52533297 52533811 -200722772 + L2 LINE L2 2110 2646 -668 534 306 211 31 chr2 52533818 52534258 -200722325 + L2 LINE L2 2794 3311 -2 339 25 0 0 chr2 52534261 52534301 -200722282 + (CA)n Simple_repeat Simple_repeat 1 40 0 25 75 0 0 chr2 52536026 52536079 -200720504 + AT_rich Low_complexity Low_complexity 1 53 0 22 35 0 0 chr2 52537192 52537221 -200719362 + AT_rich Low_complexity Low_complexity 1 29 0 479 294 119 15 chr2 52539261 52539462 -200717121 + MIR SINE MIR 40 261 -1 1948 163 3 0 chr2 52540822 52541123 -200715460 - AluSx SINE Alu -10 302 1 189 196 0 0 chr2 52541317 52541363 -200715220 + (TA)n Simple_repeat Simple_repeat 2 47 0 239 283 73 45 chr2 52541867 52542044 -200714539 + MER112 DNA MER1_type 68 249 -11 2294 82 3 0 chr2 52542161 52542454 -200714129 + AluSp SINE Alu 1 294 -19 205 293 0 0 chr2 52542454 52542512 -200714071 + GA-rich Low_complexity Low_complexity 1 58 0 22 0 0 0 chr2 52542843 52542865 -200713718 + AT_rich Low_complexity Low_complexity 1 22 0 231 333 34 17 chr2 52544091 52544208 -200712375 + MIR3 SINE MIR 59 177 -31 29 28 0 0 chr2 52544442 52544478 -200712105 + AT_rich Low_complexity Low_complexity 1 36 0 453 315 79 12 chr2 52544678 52544941 -200711642 + L1ME4a LINE L1 5401 5675 -2133 207 266 43 11 chr2 52545358 52545452 -200711131 + (CATATA)n Simple_repeat Simple_repeat 3 99 0 1791 174 50 3 chr2 52545916 52546237 -200710346 + MER2 DNA MER2_type 5 340 -4 22 35 0 0 chr2 52546833 52546862 -200709721 + AT_rich Low_complexity Low_complexity 1 29 0 207 0 0 0 chr2 52547460 52547483 -200709100 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 183 42 0 0 chr2 52548689 52548713 -200707870 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 199 303 30 0 chr2 52548777 52548843 -200707740 - L2 LINE L2 -14 3258 3191 23 33 0 0 chr2 52549444 52549474 -200707109 + AT_rich Low_complexity Low_complexity 1 30 0 224 133 44 0 chr2 52550051 52550096 -200706487 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 352 227 99 41 chr2 52550111 52550283 -200706300 + L1ME4a LINE L1 5936 6117 -4 692 150 0 0 chr2 52550384 52550497 -200706086 - AluJb SINE Alu -8 304 192 2295 78 10 3 chr2 52550835 52551142 -200705441 - AluY SINE Alu -2 309 1 749 157 0 7 chr2 52551159 52551299 -200705284 + GA-rich Low_complexity Low_complexity 3 141 0 338 195 11 0 chr2 52551901 52551988 -200704595 + CT-rich Low_complexity Low_complexity 1 88 0 22 0 0 0 chr2 52553553 52553575 -200703008 + AT_rich Low_complexity Low_complexity 1 22 0 192 200 0 0 chr2 52554309 52554349 -200702234 + (TA)n Simple_repeat Simple_repeat 2 41 0 364 274 145 86 chr2 52554548 52554782 -200701801 + MIR SINE MIR 10 257 -5 207 355 0 27 chr2 52555047 52555157 -200701426 + L3b LINE CR1 1305 1411 -172 323 214 116 80 chr2 52555686 52555798 -200700785 + L2 LINE L2 3186 3301 -12 491 340 60 9 chr2 52557644 52557876 -200698707 + MIR SINE MIR 19 262 0 286 326 20 0 chr2 52558258 52558356 -200698227 - MIR SINE MIR -24 238 139 2168 59 0 75 chr2 52558939 52559271 -200697312 + AluY SINE Alu 1 309 0 303 28 0 0 chr2 52560586 52560622 -200695961 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 1541 132 40 0 chr2 52560628 52560856 -200695727 - AluSx SINE Alu -38 274 38 218 226 27 17 chr2 52561593 52561652 -200694931 - MIR SINE MIR -56 152 90 363 72 29 14 chr2 52562457 52562526 -200694057 + (TAGA)n Simple_repeat Simple_repeat 4 73 0 21 0 0 0 chr2 52562889 52562910 -200693673 + AT_rich Low_complexity Low_complexity 1 21 0 228 366 37 15 chr2 52564250 52564384 -200692199 + MIR SINE MIR 40 176 -86 32 26 0 0 chr2 52564667 52564706 -200691877 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr2 52565804 52565826 -200690757 + AT_rich Low_complexity Low_complexity 1 22 0 1960 118 3 43 chr2 52566411 52566716 -200689867 - AluSx SINE Alu -19 293 1 398 250 143 50 chr2 52566807 52566947 -200689636 - MIR SINE MIR -81 181 29 26 0 0 0 chr2 52567150 52567176 -200689407 + AT_rich Low_complexity Low_complexity 1 26 0 748 221 71 31 chr2 52567565 52567791 -200688792 + MER96B DNA MER1_type? 1 235 -182 231 238 238 0 chr2 52567978 52568062 -200688521 - MIR SINE MIR 0 262 159 281 280 67 0 chr2 52568179 52568254 -200688329 - MIR SINE MIR -168 94 15 6546 131 16 2 chr2 52568375 52569603 -200686980 + L1MA3 LINE L1 5062 6305 0 185 159 63 0 chr2 52569670 52569733 -200686850 + (TA)n Simple_repeat Simple_repeat 2 68 0 341 252 201 13 chr2 52572657 52572816 -200683767 - MIR SINE MIR 0 262 74 219 262 102 65 chr2 52573003 52573126 -200683457 + MIR SINE MIR 31 167 -93 1793 182 25 0 chr2 52573251 52573537 -200683046 + AluJb SINE Alu 3 295 -17 22 35 0 0 chr2 52573636 52573665 -200682918 + AT_rich Low_complexity Low_complexity 1 29 0 230 95 24 0 chr2 52573904 52573946 -200682637 + (TAA)n Simple_repeat Simple_repeat 2 44 0 1136 153 0 30 chr2 52573950 52574152 -200682431 - MER2 DNA MER2_type -134 211 16 363 327 58 0 chr2 52575856 52575960 -200680623 + L2 LINE L2 3163 3272 0 24 0 0 0 chr2 52576155 52576179 -200680404 + AT_rich Low_complexity Low_complexity 1 24 0 288 0 0 0 chr2 52577871 52577903 -200678680 + (CA)n Simple_repeat Simple_repeat 2 33 0 1122 186 36 54 chr2 52578560 52578839 -200677744 - L1MD2 LINE L1 -2 6357 6084 21 0 0 0 chr2 52578864 52578885 -200677698 + AT_rich Low_complexity Low_complexity 1 21 0 1394 204 78 3 chr2 52579541 52579825 -200676758 + AluJb SINE Alu 2 306 -6 22 0 0 0 chr2 52581387 52581409 -200675174 + AT_rich Low_complexity Low_complexity 1 22 0 228 315 14 14 chr2 52581965 52582038 -200674545 - MIR SINE MIR -89 119 47 1005 184 195 4 chr2 52582410 52582666 -200673917 + AluSg1 SINE Alu 2 306 -3 271 335 85 68 chr2 52583151 52583212 -200673371 + L2 LINE L2 2915 2973 -299 1617 179 41 10 chr2 52583212 52583502 -200673081 - AluJo SINE Alu -12 300 2 271 335 85 68 chr2 52583502 52583792 -200672791 + L2 LINE L2 2973 3272 0 193 203 0 130 chr2 52583789 52583858 -200672725 - MIR SINE MIR -3 259 200 * 217 353 86 0 chr2 52584036 52584152 -200672431 + L2 LINE L2 3139 3264 -8 440 300 69 73 chr2 52585262 52585413 -200671170 + MIR SINE MIR 1 152 -110 1653 144 21 0 chr2 52585413 52585704 -200670879 + L1MB2 LINE L1 5873 6169 -2 440 300 69 73 chr2 52585704 52585812 -200670771 + MIR SINE MIR 152 259 -3 1059 347 38 13 chr2 52586225 52586700 -200669883 + L2 LINE L2 2827 3313 0 187 302 23 23 chr2 52587169 52587255 -200669328 + MIR SINE MIR 19 104 -104 209 283 0 17 chr2 52587295 52587355 -200669228 + MIR SINE MIR 95 153 -109 1875 164 0 0 chr2 52587364 52587656 -200668927 + AluJb SINE Alu 1 292 -20 1403 169 13 0 chr2 52589584 52589815 -200666768 - AluJb SINE Alu -78 234 1 230 267 0 17 chr2 52589824 52589884 -200666699 - MIR SINE MIR -109 153 95 181 289 0 0 chr2 52589924 52589976 -200666607 - MIR SINE MIR -104 104 53 336 321 114 29 chr2 52590023 52590163 -200666420 + L2 LINE L2 3121 3272 0 1738 163 53 36 chr2 52590689 52591046 -200665537 + MLT1A1 LTR MaLR 1 363 -2 540 0 0 0 chr2 52591543 52591603 -200664980 + (TAGA)n Simple_repeat Simple_repeat 2 61 0 448 296 12 80 chr2 52592202 52592452 -200664131 - MIR SINE MIR 0 262 30 1279 109 5 21 chr2 52594175 52594367 -200662216 + THE1C LTR MaLR 187 375 0 1427 158 97 11 chr2 52597025 52597304 -200659279 - AluJb SINE Alu -7 305 3 191 286 11 22 chr2 52597327 52597418 -200659165 - L2 LINE L2 -561 2753 2664 2176 107 7 0 chr2 52598018 52598316 -200658267 + AluSq SINE Alu 1 300 -13 291 381 25 0 chr2 52598432 52598550 -200658033 + MIR SINE MIR 1 121 -141 201 154 0 0 chr2 52598553 52598592 -200657991 + A-rich Low_complexity Low_complexity 1 39 0 192 152 0 0 chr2 52598708 52598741 -200657842 + (TG)n Simple_repeat Simple_repeat 2 34 0 249 256 23 0 chr2 52598741 52598827 -200657756 + L1MC4 LINE L1 6614 6701 -1341 * 266 256 47 0 chr2 52598751 52598837 -200657746 - L1MC4 LINE L1 -1339 6703 6614 450 114 0 0 chr2 52598840 52598910 -200657673 + (TA)n Simple_repeat Simple_repeat 1 70 0 2053 132 20 0 chr2 52598910 52599086 -200657497 - AluSx SINE Alu -3 309 123 189 0 0 0 chr2 52599086 52599107 -200657476 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 2053 132 20 0 chr2 52599107 52599233 -200657350 - AluSx SINE Alu -189 123 1 498 252 132 0 chr2 52599256 52599415 -200657168 - MIR SINE MIR -58 204 25 21 36 0 0 chr2 52600145 52600173 -200656410 + AT_rich Low_complexity Low_complexity 1 28 0 2444 96 0 0 chr2 52600483 52600786 -200655797 - AluSx SINE Alu -9 303 1 22 0 0 0 chr2 52601233 52601255 -200655328 + AT_rich Low_complexity Low_complexity 1 22 0 201 243 0 0 chr2 52601260 52601314 -200655269 + MIR SINE MIR 97 151 -57 291 214 0 0 chr2 52602745 52602815 -200653768 + CT-rich Low_complexity Low_complexity 3 72 0 262 267 200 20 chr2 52604393 52604543 -200652040 + MER5A DNA MER1_type 13 189 0 538 184 31 2 chr2 52605048 52605207 -200651376 - MER105 DNA DNA -1 203 10 260 346 12 0 chr2 52605472 52605553 -200651030 + L2 LINE L2 3190 3271 -1 4724 159 6 29 chr2 52605587 52606148 -200650435 + L1MB1 LINE L1 5285 5818 -370 1969 128 3 3 chr2 52606148 52606436 -200650147 + AluSx SINE Alu 21 308 -4 4724 159 6 29 chr2 52606436 52606799 -200649784 + L1MB1 LINE L1 5818 6188 0 264 229 114 48 chr2 52608301 52608406 -200648177 + MER104 DNA Tc2 32 143 -37 473 277 168 13 chr2 52608455 52608610 -200647973 - MER5A DNA MER1_type 0 189 11 771 261 11 0 chr2 52609399 52609575 -200647008 - MER45A DNA AcHobo 0 178 1 401 303 5 28 chr2 52609635 52609832 -200646751 - MIR SINE MIR -14 248 15 252 200 20 0 chr2 52610740 52610790 -200645793 + L2 LINE L2 3186 3236 -36 354 61 0 0 chr2 52610791 52610840 -200645743 + (TA)n Simple_repeat Simple_repeat 1 49 0 309 155 0 0 chr2 52610910 52610968 -200645615 + (TA)n Simple_repeat Simple_repeat 1 58 0 1098 170 199 17 chr2 52610968 52611209 -200645374 - AluSg1 SINE Alu -24 285 1 403 389 12 0 chr2 52612236 52612398 -200644185 + MIR SINE MIR 2 165 -97 2022 89 0 0 chr2 52613818 52614077 -200642506 + AluY SINE Alu 1 259 -52 1235 40 0 0 chr2 52614654 52614803 -200641780 + L1PA5 LINE L1 5998 6146 -8 32 0 0 0 chr2 52614803 52614835 -200641748 + AT_rich Low_complexity Low_complexity 1 32 0 198 0 0 0 chr2 52614895 52614917 -200641666 + (A)n Simple_repeat Simple_repeat 1 22 0 22 0 0 0 chr2 52616013 52616035 -200640548 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 52616219 52616240 -200640343 + AT_rich Low_complexity Low_complexity 1 21 0 302 283 123 43 chr2 52616769 52616907 -200639676 + MIR3 SINE MIR 51 199 -9 241 133 0 44 chr2 52617302 52617342 -200639241 - Alu SINE Alu -252 47 9 1738 116 11 19 chr2 52617342 52617610 -200638973 + AluSx SINE Alu 30 295 -17 647 279 128 9 chr2 52618702 52618921 -200637662 + MIR SINE MIR 11 255 -7 275 0 0 28 chr2 52618924 52618960 -200637623 + (TAA)n Simple_repeat Simple_repeat 3 37 0 268 68 68 27 chr2 52620421 52620494 -200636089 + T-rich Low_complexity Low_complexity 2 77 0 2339 43 13 7 chr2 52623950 52624251 -200632332 - L1PA4 LINE L1 -3 6152 5850 1021 33 0 0 chr2 52624251 52624373 -200632210 + L1P1 LINE L1 5689 5810 -345 313 362 19 0 chr2 52625635 52625740 -200630843 - L2 LINE L2 -16 3256 3150 383 320 33 0 chr2 52626062 52626243 -200630340 + L1ME LINE L1 4005 4191 -1955 400 292 100 41 chr2 52626380 52627300 -200629283 + L1ME LINE L1 4567 5543 -627 357 24 0 0 chr2 52627515 52627557 -200629026 + (TG)n Simple_repeat Simple_repeat 1 42 0 263 302 19 0 chr2 52627632 52627738 -200628845 + L1ME3A LINE L1 4904 5011 -1135 219 36 0 0 chr2 52627771 52627799 -200628784 + (CA)n Simple_repeat Simple_repeat 2 29 0 352 313 42 30 chr2 52627850 52628016 -200628567 - MIR3 SINE MIR -8 200 33 2180 248 117 44 chr2 52628938 52629789 -200626794 + L1ME3A LINE L1 5254 6165 -5 256 261 29 0 chr2 52630046 52630115 -200626468 + L3 LINE CR1 530 600 -977 229 258 124 11 chr2 52630403 52630492 -200626091 + L3 LINE CR1 1474 1572 -5 211 303 15 15 chr2 52630489 52630555 -200626028 - MIR SINE MIR -115 147 82 * 248 357 77 14 chr2 52631555 52631698 -200624885 - MIR3 SINE MIR -38 170 19 23 54 0 0 chr2 52632179 52632216 -200624367 + AT_rich Low_complexity Low_complexity 1 37 0 426 244 156 38 chr2 52632620 52632780 -200623803 + MER5A DNA MER1_type 7 185 -4 672 363 60 21 chr2 52633900 52634459 -200622124 - L2 LINE L2 -49 3264 2620 443 275 127 42 chr2 52634465 52634654 -200621929 + MIR SINE MIR 19 223 -39 2151 70 6 51 chr2 52635321 52635634 -200620949 - AluY SINE Alu -12 299 1 31 44 0 0 chr2 52636384 52636429 -200620154 + AT_rich Low_complexity Low_complexity 1 45 0 408 383 11 11 chr2 52636432 52636620 -200619963 + MIR3 SINE MIR 18 205 -3 214 227 0 0 chr2 52636652 52636696 -200619887 - L2 LINE L2 -4 3309 3266 21 57 0 0 chr2 52637330 52637365 -200619218 + AT_rich Low_complexity Low_complexity 1 35 0 517 221 9 0 chr2 52637494 52637607 -200618976 - MER105 DNA DNA -50 154 41 207 327 45 58 chr2 52638329 52638485 -200618098 + MER5B DNA MER1_type 25 178 0 249 241 0 0 chr2 52639143 52639197 -200617386 + MER112 DNA MER1_type 199 252 -8 370 310 63 14 chr2 52639205 52639347 -200617236 - MIR3 SINE MIR -54 154 6 2178 136 0 0 chr2 52639372 52639680 -200616903 - AluSx SINE Alu -2 310 3 478 259 15 38 chr2 52640276 52640407 -200616176 - MER5B DNA MER1_type -31 147 20 21 0 0 0 chr2 52642200 52642221 -200614362 + AT_rich Low_complexity Low_complexity 1 21 0 275 382 28 28 chr2 52642303 52642447 -200614136 - L2 LINE L2 0 3272 3129 353 352 119 10 chr2 52643343 52643536 -200613047 + MIR SINE MIR 14 227 -35 242 298 108 33 chr2 52643629 52644070 -200612513 - L1M4 LINE L1 -1034 5112 4628 22 35 0 0 chr2 52644454 52644483 -200612100 + AT_rich Low_complexity Low_complexity 1 29 0 186 173 40 0 chr2 52644909 52644984 -200611599 + (TA)n Simple_repeat Simple_repeat 1 78 0 30 59 0 0 chr2 52644998 52645049 -200611534 + AT_rich Low_complexity Low_complexity 1 51 0 585 233 55 93 chr2 52645566 52645802 -200610781 + L2 LINE L2 3083 3309 -4 25 31 0 0 chr2 52645873 52645905 -200610678 + AT_rich Low_complexity Low_complexity 1 32 0 320 47 0 0 chr2 52646322 52646365 -200610218 + MADE1 DNA Mariner 1 43 -37 189 0 0 0 chr2 52646870 52646891 -200609692 + (T)n Simple_repeat Simple_repeat 1 21 0 21 0 0 0 chr2 52647390 52647411 -200609172 + AT_rich Low_complexity Low_complexity 1 21 0 447 319 86 26 chr2 52647705 52648157 -200608426 + L1ME4a LINE L1 5535 6013 -108 25 0 0 0 chr2 52648219 52648244 -200608339 + AT_rich Low_complexity Low_complexity 1 25 0 435 38 0 0 chr2 52649405 52649458 -200607125 + (CA)n Simple_repeat Simple_repeat 2 54 0 203 207 52 52 chr2 52649799 52649857 -200606726 + MIR SINE MIR 134 191 -71 25 51 0 0 chr2 52651030 52651069 -200605514 + AT_rich Low_complexity Low_complexity 1 39 0 978 205 181 23 chr2 52651492 52651616 -200604967 + AluSg SINE Alu 1 104 -196 570 114 0 0 chr2 52651616 52651704 -200604879 + (CATAA)n Simple_repeat Simple_repeat 2 89 0 978 205 181 23 chr2 52651704 52651838 -200604745 + AluSg SINE Alu 104 300 0 3049 196 99 14 chr2 52652388 52653108 -200603475 - L1MB7 LINE L1 -15 6169 5389 953 213 67 106 chr2 52653329 52653746 -200602837 - MER57A LTR ERV1 0 403 3 206 139 0 70 chr2 52654113 52654156 -200602427 + (TTTTC)n Simple_repeat Simple_repeat 5 44 0 6903 30 2 1 chr2 52654191 52655018 -200601565 - L1PA4 LINE L1 0 6155 5328 676 260 23 58 chr2 52656180 52656438 -200600145 + L2 LINE L2 2501 2749 -565 607 299 142 40 chr2 52657226 52657722 -200598861 + L2 LINE L2 2747 3293 -20 252 0 0 0 chr2 52658573 52658601 -200597982 + (TG)n Simple_repeat Simple_repeat 2 29 0 24 0 0 0 chr2 52659719 52659743 -200596840 + AT_rich Low_complexity Low_complexity 1 24 0 363 283 22 0 chr2 52660133 52660225 -200596358 + L2 LINE L2 3202 3295 -18 607 306 40 18 chr2 52660284 52660506 -200596077 - MIR SINE MIR -22 240 14 272 342 36 18 chr2 52660973 52661084 -200595499 - L2 LINE L2 -8 3305 3193 289 338 13 38 chr2 52661262 52661419 -200595164 - MIR SINE MIR -100 162 10 1062 133 169 0 chr2 52662640 52662737 -200593846 - MER30 DNA MER1_type -1 229 150 188 35 35 0 chr2 52662737 52662766 -200593817 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1062 133 169 0 chr2 52662766 52662863 -200593720 - MER30 DNA MER1_type -80 150 2 363 360 11 27 chr2 52663015 52663201 -200593382 - MER5A DNA MER1_type 0 189 7 404 246 127 8 chr2 52664163 52664289 -200592294 - L2 LINE L2 -13 3259 3119 387 0 0 0 chr2 52664558 52664601 -200591982 + (TG)n Simple_repeat Simple_repeat 1 43 0 1437 237 47 102 chr2 52666124 52666760 -200589823 - L1ME1 LINE L1 -79 6087 5487 384 22 0 0 chr2 52666998 52667043 -200589540 + (ATG)n Simple_repeat Simple_repeat 1 45 0 234 0 0 0 chr2 52667043 52667069 -200589514 + (TG)n Simple_repeat Simple_repeat 1 26 0 23 33 0 0 chr2 52667287 52667317 -200589266 + AT_rich Low_complexity Low_complexity 1 30 0 299 151 27 0 chr2 52669969 52670042 -200586541 + A-rich Low_complexity Low_complexity 4 78 0 2199 237 76 14 chr2 52670586 52671232 -200585351 - L1MC4a LINE L1 -2 7806 7121 21 36 0 0 chr2 52671447 52671475 -200585108 + AT_rich Low_complexity Low_complexity 1 28 0 21 82 0 0 chr2 52671566 52671615 -200584968 + AT_rich Low_complexity Low_complexity 1 49 0 26 30 0 0 chr2 52672915 52672948 -200583635 + AT_rich Low_complexity Low_complexity 1 33 0 810 30 0 10 chr2 52673998 52674099 -200582484 + L1PA7 LINE L1 5788 5887 -267 1262 82 0 0 chr2 52674101 52674272 -200582311 + L1PA7 LINE L1 5984 6154 0 499 355 102 10 chr2 52674615 52674998 -200581585 - L2 LINE L2 -569 2745 2328 1290 161 25 12 chr2 52675040 52675414 -200581169 + MSTB LTR MaLR 1 422 -4 1985 173 82 0 chr2 52676169 52676533 -200580050 + MSTB LTR MaLR 33 426 0 688 310 38 13 chr2 52676572 52676811 -200579772 + MIR SINE MIR 12 256 -6 212 59 29 0 chr2 52676999 52677033 -200579550 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 23 0 0 0 chr2 52678178 52678201 -200578382 + AT_rich Low_complexity Low_complexity 1 23 0 23 68 0 0 chr2 52679812 52679856 -200576727 + AT_rich Low_complexity Low_complexity 1 44 0 1774 135 3 59 chr2 52680012 52680316 -200576267 + AluJb SINE Alu 1 287 -25 506 303 53 11 chr2 52682044 52682232 -200574351 + MIR SINE MIR 64 259 -3 213 289 13 0 chr2 52683090 52683166 -200573417 + (CATATA)n Simple_repeat Simple_repeat 5 81 0 2303 88 0 0 chr2 52683512 52683808 -200572775 + AluY SINE Alu 1 296 -15 180 0 0 0 chr2 52683808 52683828 -200572755 + (TA)n Simple_repeat Simple_repeat 2 21 0 1700 145 7 25 chr2 52684386 52684669 -200571914 + AluJb SINE Alu 11 288 -24 23 0 0 0 chr2 52684679 52684702 -200571881 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr2 52685295 52685320 -200571263 + AT_rich Low_complexity Low_complexity 1 25 0 210 37 0 0 chr2 52686299 52686326 -200570257 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 353 265 68 15 chr2 52686376 52686508 -200570075 + Charlie8 DNA MER1_type 26 164 -2253 1617 162 0 0 chr2 52690000 52690016 -200566567 - AluSq SINE Alu -11 302 287 423 0 0 0 chr2 52690016 52690063 -200566520 + (TG)n Simple_repeat Simple_repeat 2 48 0 1617 162 0 0 chr2 52690063 52690305 -200566278 - AluSq SINE Alu -25 288 44 22 0 0 0 chr2 52693936 52693958 -200562625 + AT_rich Low_complexity Low_complexity 1 22 0 1471 229 0 3 chr2 52693962 52694254 -200562329 - AluJo SINE Alu -21 291 1 2198 117 3 0 chr2 52696003 52696302 -200560281 - AluSq SINE Alu -11 302 3 357 24 0 0 chr2 52696328 52696337 -200560246 + (TG)n Simple_repeat Simple_repeat 1 51 0 357 24 0 0 chr2 52696337 52696379 -200560204 + (TG)n Simple_repeat Simple_repeat 2 43 0 250 352 43 12 chr2 52697504 52697666 -200558917 + L3 LINE CR1 674 840 -737 591 330 118 23 chr2 52697721 52698367 -200558216 + L2 LINE L2 2601 3303 -10 1314 238 27 32 chr2 52698452 52698860 -200557723 + Charlie1b DNA MER1_type 118 523 0 1689 223 94 47 chr2 52699439 52700032 -200556551 + MLT1E2 LTR MaLR 4 624 -2 1182 42 7 0 chr2 52700984 52701127 -200555456 - AluY SINE Alu -167 144 1 186 281 167 31 chr2 52701798 52701894 -200554689 - L3 LINE CR1 -26 1551 1443 470 289 40 55 chr2 52703880 52704081 -200552502 - MIR SINE MIR -17 245 48 23 0 0 0 chr2 52704459 52704482 -200552101 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 52704988 52705010 -200551573 + AT_rich Low_complexity Low_complexity 1 22 0 301 301 7 52 chr2 52705030 52705166 -200551417 - MIR SINE MIR -59 203 74 279 71 0 0 chr2 52705197 52705239 -200551344 + (CA)n Simple_repeat Simple_repeat 2 43 0 280 233 22 44 chr2 52705559 52705649 -200550934 + MIR SINE MIR 168 255 -7 447 326 117 19 chr2 52709371 52709635 -200546948 - L2 LINE L2 -3 3310 3021 213 382 125 7 chr2 52711334 52711486 -200545097 - MER5A DNA MER1_type 0 189 20 2293 118 0 0 chr2 52711491 52711795 -200544788 - AluSq SINE Alu -7 306 3 1195 209 110 54 chr2 52711826 52712199 -200544384 + MSTD LTR MaLR 1 394 -2 275 269 43 11 chr2 52712257 52712350 -200544233 - MIR SINE MIR -36 226 131 1882 174 0 3 chr2 52713192 52713497 -200543086 + AluSx SINE Alu 1 304 -8 419 301 136 30 chr2 52715425 52715661 -200540922 + MIR SINE MIR 2 262 0 244 271 0 0 chr2 52715906 52715965 -200540618 + L2 LINE L2 2997 3055 -217 244 304 78 52 chr2 52717088 52717203 -200539380 - L2 LINE L2 0 3313 3196 1390 190 37 88 chr2 52717781 52718155 -200538428 - MLT1A1 LTR MaLR -1 364 10 282 290 0 0 chr2 52718982 52719044 -200537539 + polypyrimidine Low_complexity Low_complexity 3 64 0 232 191 0 48 chr2 52719126 52719210 -200537373 + A-rich Low_complexity Low_complexity 6 85 0 25 83 0 0 chr2 52719481 52719541 -200537042 + AT_rich Low_complexity Low_complexity 1 60 0 2122 100 0 14 chr2 52719553 52719874 -200536709 + AluSg SINE Alu 1 317 0 259 221 97 156 chr2 52721918 52722072 -200534511 - MIR SINE MIR -68 194 50 606 245 62 5 chr2 52722525 52722717 -200533866 + L1ME4a LINE L1 5717 5919 -202 21 0 0 0 chr2 52724960 52724981 -200531602 + AT_rich Low_complexity Low_complexity 1 21 0 294 247 0 0 chr2 52724982 52725055 -200531528 + LTR30 LTR ERV1 552 624 -98 185 65 32 0 chr2 52725062 52725093 -200531490 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 354 323 0 0 chr2 52725093 52725192 -200531391 - L2 LINE L2 -22 3291 3193 202 319 134 34 chr2 52725283 52725402 -200531181 + MIR SINE MIR 23 153 -55 262 241 0 0 chr2 52726467 52726521 -200530062 + MIR SINE MIR 104 157 -105 341 91 18 0 chr2 52726524 52726579 -200530004 + AluSg/x SINE Alu 134 189 -113 226 111 0 67 chr2 52726580 52726625 -200529958 + MIR SINE MIR 157 198 -64 688 286 38 5 chr2 52726646 52726831 -200529752 - MIR SINE MIR -11 251 61 186 260 123 55 chr2 52727472 52727545 -200529038 + MIR SINE MIR 175 252 -10 378 320 10 0 chr2 52728065 52728165 -200528418 - MER91B DNA MER1_type 0 190 90 337 360 33 37 chr2 52729434 52729676 -200526907 - MIR SINE MIR -21 241 1 2501 55 0 3 chr2 52730822 52731134 -200525449 - AluY SINE Alu 0 311 1 420 341 58 12 chr2 52731732 52731905 -200524678 + MER5A DNA MER1_type 3 183 -6 977 224 23 0 chr2 52734174 52734388 -200522195 + MER20 DNA MER1_type 1 219 0 28 99 0 0 chr2 52735378 52735469 -200521114 + AT_rich Low_complexity Low_complexity 1 91 0 190 306 0 0 chr2 52735885 52735934 -200520649 + L2 LINE L2 2259 2307 -1007 378 336 81 86 chr2 52736021 52736613 -200519970 + L2 LINE L2 2556 3156 -116 1989 128 44 49 chr2 52736613 52736979 -200519604 + THE1B LTR MaLR 1 364 0 378 336 81 86 chr2 52736979 52737096 -200519487 + L2 LINE L2 3156 3272 0 1365 122 0 5 chr2 52737139 52737328 -200519255 + AluSx SINE Alu 3 190 -122 256 143 0 0 chr2 52737328 52737377 -200519206 + AluSp/q SINE Alu 255 303 0 501 276 77 19 chr2 52737570 52737726 -200518857 - MIR SINE MIR -90 172 8 631 272 140 48 chr2 52740298 52740655 -200515928 + MLT1L LTR MaLR 68 457 -158 22 109 0 0 chr2 52741654 52741746 -200514837 + AT_rich Low_complexity Low_complexity 1 92 0 191 152 22 0 chr2 52742393 52742439 -200514144 + (TA)n Simple_repeat Simple_repeat 1 47 0 1775 101 66 4 chr2 52742538 52742796 -200513787 + AluSg SINE Alu 34 307 -3 346 352 23 0 chr2 52742803 52742931 -200513652 + MIR SINE MIR 81 211 -51 22 70 0 0 chr2 52744376 52744419 -200512164 + AT_rich Low_complexity Low_complexity 1 43 0 241 250 0 0 chr2 52744764 52744820 -200511763 - MIR SINE MIR -110 152 97 636 303 71 8 chr2 52745210 52745448 -200511135 + MIR SINE MIR 10 262 0 183 80 0 0 chr2 52745528 52745553 -200511030 + (TCCCC)n Simple_repeat Simple_repeat 3 27 0 976 231 59 12 chr2 52745658 52745914 -200510669 + MLT1C LTR MaLR 200 467 0 253 341 147 28 chr2 52747144 52747355 -200509228 - MIR SINE MIR 0 262 27 23 33 0 0 chr2 52749148 52749178 -200507405 + AT_rich Low_complexity Low_complexity 1 30 0 255 103 0 0 chr2 52749222 52749261 -200507322 + (TG)n Simple_repeat Simple_repeat 1 39 0 899 215 21 34 chr2 52749465 52749702 -200506881 + AluJo SINE Alu 60 293 -19 314 154 39 13 chr2 52749956 52750034 -200506549 - MER116 DNA Mariner 0 80 1 643 221 0 0 chr2 52750656 52750792 -200505791 - FLAM_C SINE Alu -4 139 4 22 35 0 0 chr2 52750803 52750832 -200505751 + AT_rich Low_complexity Low_complexity 1 29 0 2547 111 8 16 chr2 52751629 52752007 -200504576 - THE1C LTR MaLR 0 375 1 1658 182 4 4 chr2 52752361 52752679 -200503904 + AluJo SINE Alu 5 322 0 450 310 70 5 chr2 52753822 52754009 -200502574 - MIR SINE MIR -29 233 35 349 383 51 9 chr2 52754085 52754302 -200502281 - MIR SINE MIR -22 240 15 515 323 12 12 chr2 52755802 52755969 -200500614 - MIR3 SINE MIR -7 201 35 242 164 18 0 chr2 52756506 52756561 -200500022 + A-rich Low_complexity Low_complexity 4 59 0 854 98 0 0 chr2 52756563 52756686 -200499897 + L1PA5 LINE L1 6032 6154 0 216 298 202 0 chr2 52757952 52758056 -200498527 + L2 LINE L2 3181 3305 -8 21 0 0 0 chr2 52760197 52760218 -200496365 + AT_rich Low_complexity Low_complexity 1 21 0 317 299 28 19 chr2 52761304 52761411 -200495172 + MIR SINE MIR 48 155 -107 395 280 75 5 chr2 52762568 52762768 -200493815 + L1ME LINE L1 5588 5801 -320 204 265 0 0 chr2 52764007 52764056 -200492527 + (TG)n Simple_repeat Simple_repeat 1 49 0 191 242 129 48 chr2 52764070 52764132 -200492451 - L2 LINE L2 -5 3267 3201 200 357 100 41 chr2 52764460 52764751 -200491832 - L2 LINE L2 -454 2860 2553 1350 198 46 71 chr2 52764840 52765165 -200491418 + MLT1B LTR MaLR 6 321 -69 2418 86 0 0 chr2 52765165 52765469 -200491114 - AluY SINE Alu -7 304 1 1350 198 46 71 chr2 52765469 52765538 -200491045 + MLT1B LTR MaLR 321 390 0 193 293 13 40 chr2 52766995 52767070 -200489513 + L3b LINE CR1 1384 1456 -127 1975 128 16 7 chr2 52767199 52767546 -200489037 + AluSq SINE Alu 1 313 0 2242 69 24 7 chr2 52768020 52768308 -200488275 - AluY SINE Alu -18 293 1 309 68 0 0 chr2 52768514 52768558 -200488025 + (GA)n Simple_repeat Simple_repeat 1 44 0 255 31 0 0 chr2 52770057 52770089 -200486494 + (CA)n Simple_repeat Simple_repeat 1 32 0 649 148 28 0 chr2 52770380 52770488 -200486095 + AluSq SINE Alu 118 228 -85 1401 201 35 9 chr2 52770570 52770906 -200485677 - Tigger4(Zombi) DNA MER2_type 0 2731 1 21 0 0 0 chr2 52771047 52771068 -200485515 + AT_rich Low_complexity Low_complexity 1 21 0 234 240 40 0 chr2 52772036 52772086 -200484497 + MIR SINE MIR 66 117 -91 314 296 61 0 chr2 52772213 52772328 -200484255 + L2 LINE L2 3146 3267 -46 436 330 40 12 chr2 52772708 52772881 -200483702 - MIR SINE MIR -68 194 17 997 211 9 28 chr2 52773830 52774048 -200482535 + MER20 DNA MER1_type 6 219 0 260 263 50 61 chr2 52775126 52775225 -200481358 - MER5A DNA MER1_type -75 114 17 185 196 22 0 chr2 52775437 52775483 -200481100 + CT-rich Low_complexity Low_complexity 1 47 0 1566 188 34 69 chr2 52776711 52777089 -200479494 - MLT1A1 LTR MaLR 0 365 1 785 239 14 28 chr2 52777239 52777457 -200479126 + MER20 DNA MER1_type 1 215 -4 341 351 91 5 chr2 52777477 52777685 -200478898 + MIR SINE MIR 29 254 -8 182 194 0 0 chr2 52777686 52777717 -200478866 + L2 LINE L2 3226 3256 -16 22 35 0 0 chr2 52778724 52778753 -200477830 + AT_rich Low_complexity Low_complexity 1 29 0 569 100 0 0 chr2 52778891 52778971 -200477612 - MADE1 DNA Mariner 0 80 1 1850 116 113 12 chr2 52779408 52779741 -200476842 + MER47A DNA MER2_type 1 366 0 180 77 0 0 chr2 52779811 52779837 -200476746 + (CA)n Simple_repeat Simple_repeat 2 27 0 24 53 0 0 chr2 52779867 52779905 -200476678 + AT_rich Low_complexity Low_complexity 1 38 0 2183 123 0 0 chr2 52780478 52780771 -200475812 - AluSq SINE Alu -20 293 1 490 166 11 13 chr2 52782037 52782131 -200474452 + MLT1C LTR MaLR 1 94 -296 2025 125 0 0 chr2 52782131 52782410 -200474173 + AluSq SINE Alu 1 279 -34 423 253 313 0 chr2 52782785 52782983 -200473600 + MIR SINE MIR 2 261 -1 1661 137 65 8 chr2 52783219 52783481 -200473102 + AluSx SINE Alu 4 280 -32 23 33 0 0 chr2 52783564 52783594 -200472989 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr2 52784475 52784498 -200472085 + AT_rich Low_complexity Low_complexity 1 23 0 243 0 0 0 chr2 52789006 52789033 -200467550 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 633 196 0 0 chr2 52789038 52789145 -200467438 - FLAM_A SINE Alu -35 107 1 396 0 0 0 chr2 52790365 52790409 -200466174 + (TG)n Simple_repeat Simple_repeat 1 44 0 316 111 130 0 chr2 52791726 52791780 -200464803 - FAM SINE Alu -10 165 105 2475 111 8 3 chr2 52791780 52792139 -200464444 + THE1B LTR MaLR 1 361 -3 2231 154 35 45 chr2 52792147 52792661 -200463922 + MLT2A2 LTR ERVL 1 514 -40 279 0 0 0 chr2 52792661 52792692 -200463891 + (CA)n Simple_repeat Simple_repeat 2 32 0 2231 154 35 45 chr2 52792692 52792733 -200463850 + MLT2A2 LTR ERVL 514 554 0 637 207 0 18 chr2 52792733 52792844 -200463739 - FAM SINE Alu -76 109 1 3105 154 2 4 chr2 52792870 52793395 -200463188 - L1PA16 LINE L1 -3 6163 5640 312 299 83 35 chr2 52793874 52794018 -200462565 + MIR SINE MIR 99 249 -13 207 0 0 0 chr2 52794044 52794067 -200462516 + (TTA)n Simple_repeat Simple_repeat 3 25 0 339 241 134 9 chr2 52794713 52794825 -200461758 - L2 LINE L2 -17 3296 3171 532 257 118 40 chr2 52795006 52795220 -200461363 - MIR SINE MIR -1 261 43 21 36 0 0 chr2 52797487 52797515 -200459068 + AT_rich Low_complexity Low_complexity 1 28 0 269 336 36 9 chr2 52798045 52798155 -200458428 - L2 LINE L2 -11 3261 3149 31 26 0 0 chr2 52798344 52798382 -200458201 + AT_rich Low_complexity Low_complexity 1 38 0 1235 192 36 28 chr2 52798875 52799125 -200457458 - AluJb SINE Alu -40 272 21 217 374 24 0 chr2 52799131 52799214 -200457369 + MIR3 SINE MIR 116 200 -8 285 29 0 0 chr2 52799454 52799488 -200457095 + (CA)n Simple_repeat Simple_repeat 2 35 0 245 226 16 0 chr2 52800820 52800882 -200455701 + (TA)n Simple_repeat Simple_repeat 2 64 0 211 283 50 75 chr2 52801466 52801586 -200454997 + L2 LINE L2 3192 3308 -5 21 0 0 0 chr2 52801867 52801888 -200454695 + AT_rich Low_complexity Low_complexity 1 21 0 352 270 184 31 chr2 52802333 52802496 -200454087 - L2 LINE L2 0 3313 3126 243 174 35 35 chr2 52807102 52807188 -200449395 + (TA)n Simple_repeat Simple_repeat 2 87 0 261 83 0 0 chr2 52807188 52807224 -200449359 + (CA)n Simple_repeat Simple_repeat 2 37 0 23 0 0 0 chr2 52809441 52809464 -200447119 + AT_rich Low_complexity Low_complexity 1 23 0 6313 82 38 11 chr2 52809565 52810025 -200446558 - L1PA7 LINE L1 0 6154 5708 2268 71 0 0 chr2 52810025 52810365 -200446218 + AluY SINE Alu 1 340 0 6313 82 38 11 chr2 52810365 52810840 -200445743 - L1PA7 LINE L1 -446 5708 5200 267 298 55 59 chr2 52810825 52811114 -200445469 - L1ME4a LINE L1 -212 5909 5622 * 1619 243 62 38 chr2 52811484 52811986 -200444597 - LTR40a LTR ERVL 0 519 6 416 278 217 14 chr2 52812308 52812520 -200444063 + MIR SINE MIR 8 262 0 1845 104 4 12 chr2 52812759 52813039 -200443544 + AluSx SINE Alu 35 312 0 216 410 0 0 chr2 52813585 52813680 -200442903 - MIR SINE MIR -111 151 57 625 288 76 0 chr2 52863804 52864002 -200392581 + MIR SINE MIR 50 262 0 399 89 0 0 chr2 52864082 52864138 -200392445 + (TCCCC)n Simple_repeat Simple_repeat 2 57 0 2565 111 8 16 chr2 52864263 52864641 -200391942 - THE1C LTR MaLR 0 375 1 1685 182 4 4 chr2 52864995 52865313 -200391270 + AluJo SINE Alu 5 322 0 450 310 70 5 chr2 52866456 52866643 -200389940 - MIR SINE MIR -29 233 35 349 383 51 9 chr2 52866719 52866936 -200389647 - MIR SINE MIR -22 240 15 515 323 12 12 chr2 52868436 52868603 -200387980 - MIR3 SINE MIR -7 201 35 242 164 18 0 chr2 52869140 52869195 -200387388 + A-rich Low_complexity Low_complexity 4 59 0 854 98 0 0 chr2 52869197 52869320 -200387263 + L1PA5 LINE L1 6032 6154 0 216 298 202 0 chr2 52870586 52870690 -200385893 + L2 LINE L2 3181 3305 -8 21 0 0 0 chr2 52872831 52872852 -200383731 + AT_rich Low_complexity Low_complexity 1 21 0 317 299 28 19 chr2 52873938 52874045 -200382538 + MIR SINE MIR 48 155 -107 395 280 75 5 chr2 52875202 52875402 -200381181 + L1ME LINE L1 5588 5801 -320 553 154 0 9 chr2 52876148 52876258 -200380325 + L1MA4 LINE L1 6186 6294 -6 243 0 0 0 chr2 52877183 52877210 -200379373 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 633 196 0 0 chr2 52877215 52877322 -200379261 - FLAM_A SINE Alu -35 107 1 396 0 0 0 chr2 52878542 52878586 -200377997 + (TG)n Simple_repeat Simple_repeat 1 44 0 316 111 130 0 chr2 52879903 52879957 -200376626 - FAM SINE Alu -14 165 105 2475 111 8 3 chr2 52879957 52880316 -200376267 + THE1B LTR MaLR 1 361 -3 2231 154 35 45 chr2 52880324 52880838 -200375745 + MLT2A2 LTR ERVL 1 514 -40 279 0 0 0 chr2 52880838 52880869 -200375714 + (CA)n Simple_repeat Simple_repeat 2 32 0 2231 154 35 45 chr2 52880869 52880910 -200375673 + MLT2A2 LTR ERVL 514 554 0 637 207 0 18 chr2 52880910 52881021 -200375562 - FAM SINE Alu -76 109 1 3105 154 2 4 chr2 52881047 52881572 -200375011 - L1PA16 LINE L1 -3 6163 5640 312 299 83 35 chr2 52882051 52882195 -200374388 + MIR SINE MIR 99 249 -13 207 0 0 0 chr2 52882221 52882244 -200374339 + (TTA)n Simple_repeat Simple_repeat 3 25 0 339 241 134 9 chr2 52882890 52883002 -200373581 - L2 LINE L2 -17 3296 3171 532 257 118 40 chr2 52883183 52883397 -200373186 - MIR SINE MIR -1 261 43 21 36 0 0 chr2 52885664 52885692 -200370891 + AT_rich Low_complexity Low_complexity 1 28 0 269 336 36 9 chr2 52886222 52886332 -200370251 - L2 LINE L2 -11 3261 3149 31 26 0 0 chr2 52886521 52886559 -200370024 + AT_rich Low_complexity Low_complexity 1 38 0 1235 192 36 28 chr2 52887052 52887302 -200369281 - AluJb SINE Alu -40 272 21 217 374 24 0 chr2 52887308 52887391 -200369192 + MIR3 SINE MIR 116 200 -8 285 29 0 0 chr2 52887631 52887665 -200368918 + (CA)n Simple_repeat Simple_repeat 2 35 0 245 226 16 0 chr2 52888997 52889059 -200367524 + (TA)n Simple_repeat Simple_repeat 1 63 0 211 283 50 75 chr2 52889643 52889763 -200366820 + L2 LINE L2 3192 3308 -5 21 0 0 0 chr2 52890044 52890065 -200366518 + AT_rich Low_complexity Low_complexity 1 21 0 352 270 184 31 chr2 52890510 52890673 -200365910 - L2 LINE L2 0 3313 3126 243 174 35 35 chr2 52895279 52895365 -200361218 + (TA)n Simple_repeat Simple_repeat 2 87 0 261 83 0 0 chr2 52895365 52895401 -200361182 + (CA)n Simple_repeat Simple_repeat 2 37 0 23 0 0 0 chr2 52897618 52897641 -200358942 + AT_rich Low_complexity Low_complexity 1 23 0 6317 82 38 11 chr2 52897742 52898202 -200358381 - L1PA7 LINE L1 0 6154 5708 2311 71 0 0 chr2 52898202 52898542 -200358041 + AluY SINE Alu 1 340 0 6317 82 38 11 chr2 52898542 52899017 -200357566 - L1PA7 LINE L1 -446 5708 5200 230 281 56 73 chr2 52899003 52899291 -200357292 - L1ME LINE L1 -217 5904 5622 * 1612 243 62 38 chr2 52899661 52900163 -200356420 - LTR40a LTR ERVL 0 519 6 418 278 217 14 chr2 52900485 52900697 -200355886 + MIR SINE MIR 8 262 0 1872 104 4 12 chr2 52900936 52901216 -200355367 + AluSx SINE Alu 35 312 0 202 416 10 0 chr2 52901762 52901863 -200354720 - MIR SINE MIR -111 151 50 204 265 0 0 chr2 52902800 52902849 -200353734 + (TG)n Simple_repeat Simple_repeat 1 49 0 191 242 129 48 chr2 52902863 52902925 -200353658 - L2 LINE L2 -5 3267 3201 200 357 100 41 chr2 52903254 52903545 -200353038 - L2 LINE L2 -454 2860 2553 1365 195 46 71 chr2 52903634 52903959 -200352624 + MLT1B LTR MaLR 6 321 -69 2418 86 0 0 chr2 52903959 52904263 -200352320 - AluY SINE Alu -7 304 1 1365 195 46 71 chr2 52904263 52904332 -200352251 + MLT1B LTR MaLR 321 390 0 193 293 13 40 chr2 52905789 52905864 -200350719 + L3b LINE CR1 1384 1456 -127 1974 128 16 7 chr2 52905993 52906286 -200350297 + AluSq SINE Alu 1 299 -14 266 24 48 0 chr2 52906286 52906328 -200350255 + (CAA)n Simple_repeat Simple_repeat 2 180 0 1974 128 16 7 chr2 52906328 52906340 -200350243 + AluSq SINE Alu 299 309 -4 2242 69 24 7 chr2 52906814 52907102 -200349481 - AluY SINE Alu -18 293 1 309 68 0 0 chr2 52907308 52907352 -200349231 + (GA)n Simple_repeat Simple_repeat 1 44 0 255 31 0 0 chr2 52908851 52908883 -200347700 + (CA)n Simple_repeat Simple_repeat 1 32 0 636 148 28 0 chr2 52909174 52909282 -200347301 + AluSq SINE Alu 118 228 -85 1398 201 32 7 chr2 52909364 52909700 -200346883 - Tigger4(Zombi) DNA MER2_type 0 2731 1 21 0 0 0 chr2 52909841 52909862 -200346721 + AT_rich Low_complexity Low_complexity 1 21 0 233 240 40 0 chr2 52910830 52910880 -200345703 + MIR SINE MIR 66 117 -91 318 296 61 0 chr2 52911007 52911122 -200345461 + L2 LINE L2 3146 3267 -46 450 330 40 12 chr2 52911502 52911675 -200344908 - MIR SINE MIR -68 194 17 182 206 48 32 chr2 52911871 52911934 -200344649 - MER5C DNA MER1_type -52 272 209 990 211 9 28 chr2 52912624 52912842 -200343741 + MER20 DNA MER1_type 6 219 0 252 263 50 61 chr2 52913920 52914019 -200342564 - MER5A DNA MER1_type -75 114 17 185 196 22 0 chr2 52914231 52914277 -200342306 + CT-rich Low_complexity Low_complexity 1 47 0 1559 188 34 69 chr2 52915505 52915883 -200340700 - MLT1A1 LTR MaLR 0 365 1 779 239 14 28 chr2 52916033 52916251 -200340332 + MER20 DNA MER1_type 1 215 -4 341 351 91 5 chr2 52916271 52916479 -200340104 + MIR SINE MIR 29 254 -8 180 194 0 0 chr2 52916480 52916511 -200340072 + L2 LINE L2 3226 3256 -16 22 35 0 0 chr2 52917518 52917547 -200339036 + AT_rich Low_complexity Low_complexity 1 29 0 570 100 0 0 chr2 52917685 52917765 -200338818 - MADE1 DNA Mariner 0 80 1 1857 116 113 12 chr2 52918202 52918535 -200338048 + MER47A DNA MER2_type 1 366 0 180 77 0 0 chr2 52918605 52918631 -200337952 + (CA)n Simple_repeat Simple_repeat 2 27 0 24 53 0 0 chr2 52918661 52918699 -200337884 + AT_rich Low_complexity Low_complexity 1 38 0 2152 123 0 0 chr2 52919272 52919565 -200337018 - AluSq SINE Alu -20 293 1 490 166 11 13 chr2 52920831 52920925 -200335658 + MLT1C LTR MaLR 1 94 -296 1992 125 0 0 chr2 52920925 52921204 -200335379 + AluSq SINE Alu 1 279 -34 890 153 6 0 chr2 52921216 52921379 -200335204 + GA-rich Low_complexity Low_complexity 1 164 0 1273 209 40 75 chr2 52921383 52921784 -200334799 + MLT1C LTR MaLR 81 467 0 253 341 147 28 chr2 52923014 52923225 -200333358 - MIR SINE MIR 0 262 27 418 253 313 0 chr2 52923657 52923855 -200332728 + MIR SINE MIR 2 261 -1 1627 137 65 8 chr2 52924091 52924353 -200332230 + AluSx SINE Alu 4 280 -32 23 33 0 0 chr2 52924436 52924466 -200332117 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr2 52925347 52925370 -200331213 + AT_rich Low_complexity Low_complexity 1 23 0 1989 118 7 3 chr2 52929418 52929706 -200326877 + AluSc SINE Alu 3 291 -18 23 33 0 0 chr2 52931365 52931395 -200325188 + AT_rich Low_complexity Low_complexity 1 30 0 255 103 0 0 chr2 52931439 52931478 -200325105 + (TG)n Simple_repeat Simple_repeat 1 39 0 899 215 21 34 chr2 52931682 52931919 -200324664 + AluJo SINE Alu 60 293 -19 314 154 39 13 chr2 52932173 52932251 -200324332 - MER116 DNA Mariner 0 80 1 643 221 0 0 chr2 52932873 52933009 -200323574 - FLAM_C SINE Alu -4 139 4 22 35 0 0 chr2 52933020 52933049 -200323534 + AT_rich Low_complexity Low_complexity 1 29 0 4158 190 36 30 chr2 52935922 52936902 -200319681 + L1MB1 LINE L1 3335 4320 -1826 935 231 48 19 chr2 52936911 52937180 -200319403 - L1 LINE L1 -1510 4636 4360 4460 182 29 24 chr2 52937187 52938407 -200318176 + L1MB1 LINE L1 4930 6155 -13 232 351 0 0 chr2 52939758 52939835 -200316748 - MIR3 SINE MIR -21 187 111 804 294 29 20 chr2 52939849 52939896 -200316687 + MIR SINE MIR 15 60 -202 1507 88 65 0 chr2 52939896 52940112 -200316471 - MER30 DNA MER1_type 0 230 1 804 294 29 20 chr2 52940112 52940309 -200316274 + MIR SINE MIR 60 261 -1 27 0 0 0 chr2 52940629 52940656 -200315927 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr2 52940885 52940906 -200315677 + AT_rich Low_complexity Low_complexity 1 21 0 216 283 57 0 chr2 52942418 52942471 -200314112 + MIR SINE MIR 204 259 -3 225 0 0 0 chr2 52943017 52943042 -200313541 + (TG)n Simple_repeat Simple_repeat 1 25 0 3724 199 98 13 chr2 52943928 52944703 -200311880 + MER21B LTR ERV1 9 849 -14 384 312 31 102 chr2 52944725 52945106 -200311477 - L2 LINE L2 -97 3216 2863 1062 321 103 39 chr2 52945147 52945863 -200310720 - L2 LINE L2 -660 2654 1893 22 35 0 0 chr2 52946196 52946225 -200310358 + AT_rich Low_complexity Low_complexity 1 29 0 186 71 0 0 chr2 52946312 52946340 -200310243 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 6542 65 11 25 chr2 52946340 52948001 -200308582 - SVA Other Other -683 1366 1 949 100 15 0 chr2 52948013 52948143 -200308440 - AluSp SINE Alu -181 132 1 279 0 0 0 chr2 52948715 52948746 -200307837 + (A)n Simple_repeat Simple_repeat 1 31 0 323 214 54 167 chr2 52949478 52949667 -200306916 + L1ME2 LINE L1 5550 5759 -405 1340 104 0 0 chr2 52949667 52949859 -200306724 - L1MA1 LINE L1 -1 6301 6110 323 214 54 167 chr2 52949859 52950369 -200306214 + L1ME2 LINE L1 5759 6162 -2 1730 147 0 27 chr2 52951085 52951400 -200305183 + AluSx SINE Alu 1 307 0 2977 249 47 26 chr2 52951600 52952522 -200304061 + L1ME1 LINE L1 5209 6148 -18 317 342 51 0 chr2 52953302 52953419 -200303164 + MIR3 SINE MIR 40 162 -46 199 298 21 21 chr2 52953491 52953585 -200302998 - MER5A DNA MER1_type -95 94 1 23 54 0 0 chr2 52954119 52954156 -200302427 + AT_rich Low_complexity Low_complexity 1 37 0 350 273 102 0 chr2 52954512 52954640 -200301943 + MIR SINE MIR 23 163 -99 2957 147 43 22 chr2 52954919 52955472 -200301111 - L1MA7 LINE L1 -5 6286 5722 238 333 48 0 chr2 52955798 52955882 -200300701 + L2 LINE L2 3185 3272 0 335 319 49 27 chr2 52956069 52956254 -200300329 + MIR SINE MIR 2 190 -72 1313 216 72 55 chr2 52957161 52957620 -200298963 + MLT1C LTR MaLR 1 467 0 252 311 29 58 chr2 52957657 52957760 -200298823 - MIR SINE MIR -83 125 26 636 291 33 41 chr2 52958351 52958622 -200297961 - L2 LINE L2 0 3313 3045 285 29 0 0 chr2 52962267 52962301 -200294282 + (CATTT)n Simple_repeat Simple_repeat 1 34 0 1316 246 81 14 chr2 52962338 52962757 -200293826 + MER110A LTR ERV1 1 447 -21 1511 184 11 18 chr2 52963575 52963847 -200292736 - AluJb SINE Alu -18 294 25 341 269 128 0 chr2 52964021 52964170 -200292413 - MIR SINE MIR -13 249 82 * 350 314 82 41 chr2 52964145 52964390 -200292193 + L2 LINE L2 3036 3290 -23 1189 227 48 62 chr2 52965462 52965916 -200290667 - MER39 LTR ERV1 -2 705 258 23 0 0 0 chr2 52965938 52965961 -200290622 + AT_rich Low_complexity Low_complexity 1 23 0 3258 115 73 112 chr2 52966178 52966994 -200289589 + LTR1 LTR ERV1 1 785 0 1872 196 39 49 chr2 52967904 52968415 -200288168 + MER67D LTR ERV1 5 510 -4 1536 152 9 71 chr2 52968642 52968965 -200287618 + AluJo SINE Alu 3 305 -7 367 295 20 27 chr2 52969157 52969306 -200287277 - MER117 DNA MER1_type -48 149 2 263 304 0 0 chr2 52971321 52971377 -200285206 - L3 LINE CR1 -7 1570 1515 401 255 69 7 chr2 52971378 52971523 -200285060 + MER113 DNA MER1_type? 51 204 -317 245 321 83 0 chr2 52971589 52971673 -200284910 - L3 LINE CR1 -1058 519 429 266 287 178 8 chr2 52973624 52973753 -200282830 - MER5A DNA MER1_type -6 183 33 21 0 0 0 chr2 52974028 52974049 -200282534 + AT_rich Low_complexity Low_complexity 1 21 0 277 347 65 32 chr2 52974064 52974188 -200282395 - MIR SINE MIR -115 147 20 242 200 9 122 chr2 52974460 52974575 -200282008 - MIR SINE MIR -7 255 154 238 372 43 0 chr2 52974804 52974898 -200281685 + L3b LINE CR1 1267 1364 -219 256 242 30 0 chr2 52978480 52978546 -200278037 + (CATATA)n Simple_repeat Simple_repeat 3 70 0 255 31 0 0 chr2 52978550 52978582 -200278001 + (TG)n Simple_repeat Simple_repeat 1 32 0 207 268 54 62 chr2 52979408 52979520 -200277063 - L2 LINE L2 0 3272 3162 802 174 20 7 chr2 52979944 52980093 -200276490 - FRAM SINE Alu -26 150 1 300 352 24 16 chr2 52980101 52980226 -200276357 - MIR3 SINE MIR -46 162 37 2131 126 0 0 chr2 52980635 52980936 -200275647 + AluSq SINE Alu 1 301 -12 218 247 0 74 chr2 52981297 52981378 -200275205 + MIR SINE MIR 84 158 -104 396 319 157 0 chr2 52981388 52981598 -200274985 - MIR SINE MIR -14 248 6 299 326 57 28 chr2 52982904 52983045 -200273538 - L2 LINE L2 0 3272 3128 624 221 177 6 chr2 52983528 52983686 -200272897 - MER5A DNA MER1_type 0 189 5 211 273 66 74 chr2 52984110 52984231 -200272352 - MIR3 SINE MIR -53 155 36 315 0 0 0 chr2 52984296 52984331 -200272252 + (TG)n Simple_repeat Simple_repeat 2 36 0 252 0 0 0 chr2 52984374 52984402 -200272181 + (T)n Simple_repeat Simple_repeat 1 28 0 343 239 101 9 chr2 52984520 52984629 -200271954 - MIR SINE MIR -26 236 118 2258 141 29 21 chr2 52986811 52986857 -200269726 + L1PB4 LINE L1 5734 5778 -378 426 39 0 0 chr2 52986857 52986909 -200269674 + (TA)n Simple_repeat Simple_repeat 1 52 0 2258 141 29 21 chr2 52986909 52987282 -200269301 + L1PB4 LINE L1 5778 6156 0 21 57 0 0 chr2 52988371 52988406 -200268177 + AT_rich Low_complexity Low_complexity 1 35 0 307 345 0 0 chr2 52988605 52988692 -200267891 - L2 LINE L2 0 3272 3186 701 194 0 0 chr2 52989053 52989177 -200267406 - FLAM_A SINE Alu -9 124 1 23 33 0 0 chr2 52989965 52989995 -200266588 + AT_rich Low_complexity Low_complexity 1 30 0 219 385 0 0 chr2 52990915 52990980 -200265603 - L2 LINE L2 -89 3183 3119 253 0 0 51 chr2 52991312 52991351 -200265232 + (TAAAA)n Simple_repeat Simple_repeat 2 38 0 1326 164 3 143 chr2 52991386 52991728 -200264855 + AluJo SINE Alu 1 294 -8 790 290 58 0 chr2 52991765 52991989 -200264594 + MIR SINE MIR 21 257 -5 21 57 0 0 chr2 52992787 52992822 -200263761 + AT_rich Low_complexity Low_complexity 1 35 0 277 252 102 47 chr2 52993070 52993197 -200263386 - MIR SINE MIR -73 189 56 258 218 0 0 chr2 52993977 52994032 -200262551 + L1MA9 LINE L1 6219 6273 -39 213 94 0 0 chr2 52994164 52994196 -200262387 + (TTA)n Simple_repeat Simple_repeat 3 34 0 365 189 11 0 chr2 52995873 52995963 -200260620 + (CA)n Simple_repeat Simple_repeat 2 92 0 1808 156 112 16 chr2 52997675 52998041 -200258542 + MLT2C2 LTR ERVL 3 403 -61 21 0 0 0 chr2 53000514 53000535 -200256048 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 53000612 53000633 -200255950 + AT_rich Low_complexity Low_complexity 1 21 0 251 363 52 13 chr2 53001121 53001269 -200255314 - MIR SINE MIR -76 132 1 386 283 10 0 chr2 53001380 53001479 -200255104 + MER99 DNA DNA 2 101 -727 22 35 0 0 chr2 53001741 53001770 -200254813 + AT_rich Low_complexity Low_complexity 1 29 0 1232 213 36 11 chr2 53002158 53002435 -200254148 + MER99 DNA DNA 192 475 -353 735 229 144 41 chr2 53002435 53002754 -200253829 + L1ME3A LINE L1 5767 6118 -52 23 0 0 0 chr2 53003533 53003556 -200253027 + AT_rich Low_complexity Low_complexity 1 23 0 288 0 0 0 chr2 53004536 53004568 -200252015 + (CA)n Simple_repeat Simple_repeat 2 33 0 22 56 0 0 chr2 53005676 53005712 -200250871 + AT_rich Low_complexity Low_complexity 1 36 0 261 318 11 0 chr2 53007225 53007313 -200249270 + CT-rich Low_complexity Low_complexity 4 92 0 196 357 153 43 chr2 53007912 53008147 -200248436 + L2 LINE L2 2992 3252 -20 25 65 0 0 chr2 53008670 53008716 -200247867 + AT_rich Low_complexity Low_complexity 1 46 0 716 318 101 19 chr2 53010591 53010959 -200245624 - L2 LINE L2 0 3313 2916 2083 25 0 0 chr2 53012527 53012770 -200243813 - L1PA3 LINE L1 -210 5945 5703 1691 15 0 0 chr2 53012770 53012996 -200243587 + L1PA3 LINE L1 5955 6155 0 267 323 32 21 chr2 53014097 53014190 -200242393 + MIR3 SINE MIR 72 165 -43 2025 151 3 0 chr2 53014284 53014595 -200241988 - AluSq SINE Alu -1 312 1 537 262 111 90 chr2 53015007 53015280 -200241303 - L2 LINE L2 -13 3300 3013 2099 121 3 3 chr2 53015280 53015577 -200241006 + AluSx SINE Alu 1 297 -15 537 262 111 90 chr2 53015577 53015727 -200240856 - L2 LINE L2 -300 3013 2868 446 222 157 38 chr2 53015838 53016023 -200240560 + MIR SINE MIR 43 249 -13 223 213 0 43 chr2 53016150 53016197 -200240386 - L2 LINE L2 -27 3286 3242 948 272 52 32 chr2 53016240 53016617 -200239966 + L1ME1 LINE L1 5760 6141 -25 25 0 0 0 chr2 53018281 53018306 -200238277 + AT_rich Low_complexity Low_complexity 1 25 0 510 251 115 54 chr2 53019636 53019931 -200236652 + L2 LINE L2 3000 3312 -1 2238 98 0 7 chr2 53019969 53020275 -200236308 + AluY SINE Alu 1 304 -7 24 32 0 0 chr2 53022963 53022994 -200233589 + AT_rich Low_complexity Low_complexity 1 31 0 207 369 87 0 chr2 53023272 53023375 -200233208 + MIR3 SINE MIR 53 164 -44 23 33 0 0 chr2 53024454 53024484 -200232099 + AT_rich Low_complexity Low_complexity 1 30 0 277 291 138 65 chr2 53024664 53024925 -200231658 + L3 LINE CR1 437 716 -861 277 391 77 26 chr2 53025002 53025342 -200231241 + L2 LINE L2 2370 2726 -588 336 241 0 13 chr2 53025483 53025562 -200231021 + MLT1D LTR MaLR 1 78 -427 1568 182 97 55 chr2 53025573 53026213 -200230370 + MER39 LTR ERV1 1 705 -2 1401 224 25 28 chr2 53026291 53026648 -200229935 + MLT1D LTR MaLR 150 505 0 183 402 43 22 chr2 53026775 53026867 -200229716 + L2 LINE L2 3143 3236 -36 601 327 56 63 chr2 53026925 53027058 -200229525 + L3 LINE CR1 835 968 -609 291 93 0 0 chr2 53027058 53027101 -200229482 + (CA)n Simple_repeat Simple_repeat 2 44 0 601 327 56 63 chr2 53027101 53027362 -200229221 + L3 LINE CR1 968 1226 -351 986 251 104 22 chr2 53027383 53027738 -200228845 + MSTD LTR MaLR 1 384 -12 367 348 52 35 chr2 53027910 53028140 -200228443 + L3 LINE CR1 1339 1572 -5 406 391 30 13 chr2 53029017 53029252 -200227331 - MIR SINE MIR -16 246 8 207 114 0 0 chr2 53031486 53031521 -200225062 + (A)n Simple_repeat Simple_repeat 1 35 0 569 294 77 45 chr2 53033565 53033875 -200222708 - L2 LINE L2 -6 3307 2988 266 345 86 0 chr2 53034571 53034687 -200221896 - MIR SINE MIR -104 158 33 21 0 0 0 chr2 53034999 53035020 -200221563 + AT_rich Low_complexity Low_complexity 1 21 0 193 277 0 0 chr2 53035020 53035067 -200221516 + MIR3 SINE MIR 156 202 -6 1815 203 14 6 chr2 53036203 53036562 -200220021 + MLT1A1 LTR MaLR 4 365 0 325 272 37 37 chr2 53037066 53037202 -200219381 - L2 LINE L2 -61 3252 3117 22 0 0 0 chr2 53039119 53039141 -200217442 + AT_rich Low_complexity Low_complexity 1 22 0 212 151 0 38 chr2 53039201 53039254 -200217329 + (CATA)n Simple_repeat Simple_repeat 2 52 0 21 36 0 0 chr2 53039756 53039784 -200216799 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 53040440 53040464 -200216119 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr2 53042193 53042216 -200214367 + AT_rich Low_complexity Low_complexity 1 23 0 232 300 10 0 chr2 53045471 53045571 -200211012 + (TA)n Simple_repeat Simple_repeat 2 102 0 27 49 0 0 chr2 53050230 53050271 -200206312 + AT_rich Low_complexity Low_complexity 1 41 0 1331 143 0 10 chr2 53050582 53050791 -200205792 - AluSg/x SINE Alu -17 295 89 1380 142 0 0 chr2 53050821 53051018 -200205565 + AluSx SINE Alu 1 197 -115 1019 182 10 0 chr2 53051027 53051225 -200205358 - L1 LINE L1 -3818 2328 2129 1511 123 38 0 chr2 53051225 53051448 -200205135 + L1PB1 LINE L1 5903 6146 -5 216 0 0 0 chr2 53051751 53051775 -200204808 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 22 0 0 0 chr2 53052721 53052743 -200203840 + AT_rich Low_complexity Low_complexity 1 22 0 560 237 69 0 chr2 53053207 53053338 -200203245 - MER3 DNA MER1_type -64 145 6 1701 146 38 14 chr2 53054165 53054452 -200202131 + AluSx SINE Alu 1 294 -18 310 51 0 0 chr2 53054906 53054945 -200201638 - tRNA-Ile-ATT tRNA tRNA -38 39 1 202 302 94 38 chr2 53055973 53056079 -200200504 + L2 LINE L2 3200 3311 -2 285 75 0 0 chr2 53056358 53056398 -200200185 + (ATG)n Simple_repeat Simple_repeat 1 40 0 2978 188 45 2 chr2 53056527 53057102 -200199481 - MER7C DNA MER2_type -1 601 2 1319 117 10 0 chr2 53057102 53057298 -200199285 - THE1C-int LTR MaLR -1380 200 3 664 130 61 0 chr2 53057300 53057415 -200199168 - THE1C LTR MaLR 0 375 254 2421 91 0 0 chr2 53057645 53057953 -200198630 + AluY SINE Alu 1 308 -3 28 102 0 0 chr2 53058088 53058186 -200198397 + AT_rich Low_complexity Low_complexity 1 98 0 2244 115 3 0 chr2 53058914 53059220 -200197363 + AluSc SINE Alu 4 310 0 1348 181 86 42 chr2 53059641 53060000 -200196583 + THE1C LTR MaLR 1 375 0 9222 146 9 36 chr2 53060002 53061625 -200194958 + THE1C-int LTR MaLR 3 1580 0 1279 195 54 43 chr2 53061625 53061995 -200194588 + THE1C LTR MaLR 1 374 -1 566 100 0 0 chr2 53062009 53062089 -200194494 + MADE1 DNA Mariner 1 80 0 206 261 0 0 chr2 53062097 53062143 -200194440 - MIR SINE MIR -114 148 103 288 178 0 0 chr2 53062209 53062254 -200194329 + MER3 DNA MER1_type 1 45 -164 380 304 60 8 chr2 53063025 53063219 -200193364 + MIR SINE MIR 41 244 -18 741 211 8 0 chr2 53063769 53063902 -200192681 - MER58A DNA MER1_type -1 223 90 1589 173 40 0 chr2 53063908 53064185 -200192398 + AluJb SINE Alu 1 288 -24 373 272 25 0 chr2 53064252 53064333 -200192250 - MER58A DNA MER1_type -24 83 1 207 0 0 0 chr2 53064593 53064616 -200191967 + (TA)n Simple_repeat Simple_repeat 1 23 0 207 0 0 0 chr2 53064615 53064638 -200191945 + (CA)n Simple_repeat Simple_repeat 2 24 0 234 0 0 0 chr2 53064653 53064679 -200191904 + (TTA)n Simple_repeat Simple_repeat 1 26 0 21 0 0 0 chr2 53065384 53065405 -200191178 + AT_rich Low_complexity Low_complexity 1 21 0 319 234 0 16 chr2 53065961 53066025 -200190558 + L2 LINE L2 3210 3272 0 37 23 0 0 chr2 53066077 53066121 -200190462 + AT_rich Low_complexity Low_complexity 1 44 0 33 0 0 0 chr2 53066749 53066782 -200189801 + AT_rich Low_complexity Low_complexity 1 33 0 25 31 0 0 chr2 53068154 53068186 -200188397 + AT_rich Low_complexity Low_complexity 1 32 0 564 240 62 0 chr2 53069236 53069365 -200187218 - MER20 DNA MER1_type 0 219 83 275 224 0 0 chr2 53069554 53069612 -200186971 - MIR SINE MIR -109 153 96 213 65 0 0 chr2 53069919 53069950 -200186633 + (AGATG)n Simple_repeat Simple_repeat 4 34 0 1902 237 75 18 chr2 53069994 53070597 -200185986 + MER20B DNA MER1_type 60 696 -87 201 39 0 0 chr2 53070654 53070680 -200185903 + (TA)n Simple_repeat Simple_repeat 2 27 0 2647 14 0 0 chr2 53070680 53070970 -200185613 - AluYa5 SINE Alu -10 301 12 21 0 0 0 chr2 53070971 53070992 -200185591 + AT_rich Low_complexity Low_complexity 1 21 0 427 309 0 36 chr2 53071204 53071343 -200185240 - L2 LINE L2 -9 3304 3171 259 307 40 0 chr2 53071910 53071985 -200184598 + MIR SINE MIR 52 129 -133 2039 120 7 20 chr2 53072272 53072572 -200184011 - AluSx SINE Alu -12 300 5 242 303 58 10 chr2 53074315 53074414 -200182169 - MIR SINE MIR -67 141 41 1454 177 105 3 chr2 53074809 53075103 -200181480 + MER44D DNA MER2_type 9 602 -7 1416 169 130 0 chr2 53075182 53075436 -200181147 + AluSx SINE Alu 2 288 -14 43 0 0 0 chr2 53075436 53075479 -200181104 + AT_rich Low_complexity Low_complexity 1 43 0 317 301 131 11 chr2 53075488 53075671 -200180912 - MIR SINE MIR -10 252 48 550 236 50 2 chr2 53075934 53076073 -200180510 + MIR SINE MIR 40 182 -80 766 209 32 13 chr2 53076110 53076268 -200180315 + MER20 DNA MER1_type 58 218 -1 1127 258 57 26 chr2 53077185 53077604 -200178979 - L1 LINE L1 -1752 4394 3963 440 265 96 31 chr2 53077606 53077799 -200178784 - L1 LINE L1 -2289 3857 3649 3055 203 50 11 chr2 53077803 53078463 -200178120 + L1MB7 LINE L1 5479 6164 -20 274 278 56 48 chr2 53078524 53078650 -200177933 - MIR3 SINE MIR -7 201 75 315 122 0 0 chr2 53079023 53079072 -200177511 + (TCCC)n Simple_repeat Simple_repeat 4 52 0 463 265 213 0 chr2 53079947 53080083 -200176500 - MER5A DNA MER1_type -18 171 7 288 0 0 0 chr2 53081233 53081265 -200175318 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 181 219 16 16 chr2 53082029 53082093 -200174490 + CT-rich Low_complexity Low_complexity 3 66 0 220 203 29 29 chr2 53083863 53083932 -200172651 + (CATATA)n Simple_repeat Simple_repeat 2 70 0 24 0 0 0 chr2 53084173 53084197 -200172386 + AT_rich Low_complexity Low_complexity 1 24 0 227 321 92 54 chr2 53086367 53086551 -200170032 + MIR3 SINE MIR 14 204 -4 678 302 170 35 chr2 53087037 53087583 -200169000 + L2 LINE L2 1322 1941 -1373 335 320 207 29 chr2 53087586 53088069 -200168514 + L2 LINE L2 2711 3297 -16 193 194 0 0 chr2 53088106 53088142 -200168441 + MIR SINE MIR 227 262 0 3733 124 61 7 chr2 53088469 53089088 -200167495 - MER39B LTR ERV1 0 653 1 2240 102 0 10 chr2 53090018 53090331 -200166252 + AluSg SINE Alu 1 310 0 22 0 0 0 chr2 53090331 53090353 -200166230 + AT_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr2 53090785 53090821 -200165762 + AT_rich Low_complexity Low_complexity 1 36 0 2777 123 32 0 chr2 53091145 53091553 -200165030 - MER1A DNA MER1_type 0 529 109 289 407 14 14 chr2 53091557 53091697 -200164886 - MER91A DNA MER1_type -56 140 1 203 291 79 31 chr2 53092599 53092726 -200163857 - L2 LINE L2 -4 3309 3177 284 220 17 119 chr2 53093585 53093703 -200162880 + MER112 DNA MER1_type 118 223 -37 1002 231 48 9 chr2 53093706 53093935 -200162648 + Charlie1 DNA MER1_type 2 239 -2522 686 166 7 14 chr2 53093920 53094059 -200162524 + Charlie1 DNA MER1_type 2623 2760 -1 * 352 286 109 68 chr2 53096834 53096982 -200159601 - L1ME4a LINE L1 -17 6104 5963 374 39 19 0 chr2 53096982 53097034 -200159549 + (TA)n Simple_repeat Simple_repeat 1 53 0 352 286 109 68 chr2 53097034 53097280 -200159303 - L1ME4a LINE L1 -158 5963 5694 192 284 15 30 chr2 53097303 53097370 -200159213 + L2 LINE L2 3205 3270 -2 21 0 0 0 chr2 53098675 53098696 -200157887 + AT_rich Low_complexity Low_complexity 1 21 0 542 165 11 0 chr2 53098885 53098976 -200157607 - AluSc SINE Alu -76 233 142 274 0 0 0 chr2 53098987 53099019 -200157564 - MADE1 DNA Mariner -37 43 12 2088 134 0 3 chr2 53099895 53100202 -200156381 + AluSx SINE Alu 6 311 -1 21 0 0 0 chr2 53100273 53100294 -200156289 + AT_rich Low_complexity Low_complexity 1 21 0 389 20 20 0 chr2 53100535 53100585 -200155998 + (TG)n Simple_repeat Simple_repeat 2 52 0 183 100 0 0 chr2 53100662 53100692 -200155891 + (GA)n Simple_repeat Simple_repeat 2 31 0 26 0 0 0 chr2 53101425 53101451 -200155132 + AT_rich Low_complexity Low_complexity 1 26 0 195 129 0 0 chr2 53101661 53101692 -200154891 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 1898 119 0 83 chr2 53102663 53102990 -200153593 - AluSx SINE Alu -2 310 11 521 213 125 25 chr2 53103012 53103172 -200153411 + MER58C DNA MER1_type 38 213 -2 455 360 61 24 chr2 53104039 53104367 -200152216 + HAL1 LINE L1 1427 1766 -741 341 308 114 38 chr2 53104844 53105211 -200151372 + L1ME LINE L1 5415 5809 -312 22 70 0 0 chr2 53105281 53105324 -200151259 + AT_rich Low_complexity Low_complexity 1 43 0 22 70 0 0 chr2 53105973 53106016 -200150567 + AT_rich Low_complexity Low_complexity 1 43 0 394 349 17 34 chr2 53107446 53107621 -200148962 + MIR SINE MIR 21 192 -70 2711 225 77 43 chr2 53108039 53108982 -200147601 - L1ME1 LINE L1 -5 6161 5192 395 287 50 10 chr2 53109727 53109828 -200146755 - L2 LINE L2 0 3272 3168 492 295 87 6 chr2 53110933 53111116 -200145467 - MIR SINE MIR -56 206 9 180 278 0 56 chr2 53112240 53112294 -200144289 - L3 LINE CR1 -1025 552 502 433 298 176 0 chr2 53112742 53112947 -200143636 - MIR SINE MIR -14 248 8 445 304 14 0 chr2 53113881 53114029 -200142554 - MIR3 SINE MIR -10 198 49 1779 154 10 26 chr2 53114033 53114338 -200142245 + AluSx SINE Alu 3 302 -10 199 340 90 21 chr2 53115228 53115372 -200141211 + MIR3 SINE MIR 3 156 -52 342 143 18 0 chr2 53115796 53115852 -200140731 + AluJb SINE Alu 3 59 -243 290 162 0 4 chr2 53115928 53116101 -200140482 + AluJb SINE Alu 62 302 0 1380 184 31 34 chr2 53116222 53116516 -200140067 - AluJo SINE Alu -11 301 9 251 385 98 0 chr2 53117978 53118100 -200138483 - L2 LINE L2 0 3272 3139 987 86 0 21 chr2 53118228 53118368 -200138215 + MER11B LTR ERVK 1086 1222 -14 772 333 126 30 chr2 53118388 53119211 -200137372 + L2 LINE L2 2412 3313 0 26 0 0 0 chr2 53119479 53119505 -200137078 + AT_rich Low_complexity Low_complexity 1 26 0 1104 252 44 53 chr2 53120458 53120985 -200135598 + MER39 LTR ERV1 1 707 0 325 313 130 0 chr2 53121491 53121622 -200134961 + MIR3 SINE MIR 49 196 -12 202 182 0 45 chr2 53122441 53122485 -200134098 + GA-rich Low_complexity Low_complexity 3 44 0 723 130 0 0 chr2 53123252 53123387 -200133196 + AluSg/x SINE Alu 175 309 0 690 203 7 0 chr2 53124004 53124152 -200132431 - L1MA5A LINE L1 -4 6293 6145 1934 216 2 5 chr2 53124152 53124757 -200131826 + L1M2 LINE L1 2488 3090 -3758 2957 31 0 8 chr2 53124920 53125277 -200131306 + L1PA4 LINE L1 5802 6155 0 378 352 67 30 chr2 53125495 53125765 -200130818 + L2 LINE L2 2949 3228 -44 22 35 0 0 chr2 53126272 53126301 -200130282 + AT_rich Low_complexity Low_complexity 1 29 0 34 24 0 0 chr2 53127439 53127480 -200129103 + AT_rich Low_complexity Low_complexity 1 41 0 377 289 57 95 chr2 53129125 53129506 -200127077 - L1MC4a LINE L1 -338 5783 5478 1340 195 76 11 chr2 53129512 53129789 -200126794 - AluJo SINE Alu -17 295 1 230 303 28 9 chr2 53129842 53129951 -200126632 - L1P5 LINE L1 -723 5431 5321 195 254 68 0 chr2 53129991 53130050 -200126533 - MIR SINE MIR -7 255 193 192 349 18 72 chr2 53130509 53130675 -200125908 - L2 LINE L2 -610 2704 2548 286 336 40 20 chr2 53133084 53133233 -200123350 + L3b LINE CR1 1277 1428 -155 22 0 0 0 chr2 53133326 53133348 -200123235 + AT_rich Low_complexity Low_complexity 1 22 0 621 291 41 23 chr2 53133361 53133581 -200123002 + MIR SINE MIR 17 240 -22 193 338 29 15 chr2 53133754 53133822 -200122761 + MIR SINE MIR 25 93 -115 6741 76 4 0 chr2 53134574 53135978 -200120605 + L1PA7 LINE L1 4627 6151 -3 1158 188 13 77 chr2 53136046 53136344 -200120239 - AluJo SINE Alu -9 303 25 23 33 0 0 chr2 53136508 53136538 -200120045 + AT_rich Low_complexity Low_complexity 1 30 0 359 364 51 15 chr2 53137911 53138106 -200118477 + MIR SINE MIR 45 246 -16 696 239 157 4 chr2 53138779 53139009 -200117574 - L1ME3 LINE L1 0 6162 5898 26 0 0 0 chr2 53139872 53139898 -200116685 + AT_rich Low_complexity Low_complexity 1 26 0 608 279 172 9 chr2 53140918 53141133 -200115450 - MIR SINE MIR -11 251 2 379 304 29 68 chr2 53141879 53142086 -200114497 + L2 LINE L2 2635 2833 -481 250 303 151 25 chr2 53142358 53142477 -200114106 + L2 LINE L2 3180 3313 0 270 136 0 0 chr2 53142478 53142522 -200114061 + (TGAA)n Simple_repeat Simple_repeat 3 46 0 213 173 39 19 chr2 53148956 53149008 -200107575 + (CA)n Simple_repeat Simple_repeat 1 53 0 333 0 0 0 chr2 53149251 53149288 -200107295 + (CA)n Simple_repeat Simple_repeat 2 38 0 347 89 18 0 chr2 53150855 53150911 -200105672 + (GGA)n Simple_repeat Simple_repeat 1 57 0 423 56 0 0 chr2 53151215 53151269 -200105314 + (GA)n Simple_repeat Simple_repeat 1 54 0 703 261 49 20 chr2 53152369 53152572 -200104011 + MIR SINE MIR 13 221 -41 228 265 0 0 chr2 53153618 53153667 -200102916 + MIR SINE MIR 98 146 -62 648 321 63 4 chr2 53153716 53153953 -200102630 - MIR SINE MIR -10 252 2 623 290 31 88 chr2 53156764 53157116 -200099467 - MER102b DNA MER1_type 0 341 10 1485 188 72 77 chr2 53157432 53157901 -200098682 + MLT1C LTR MaLR 1 467 0 396 0 0 0 chr2 53158034 53158078 -200098505 + (CA)n Simple_repeat Simple_repeat 1 44 0 2018 202 4 129 chr2 53158407 53158942 -200097641 + MER70A LTR ERVL 1 468 -4 2115 262 81 19 chr2 53159026 53160092 -200096491 - L1ME3A LINE L1 -10 6229 5091 22 56 0 0 chr2 53160234 53160270 -200096313 + AT_rich Low_complexity Low_complexity 1 36 0 630 289 141 18 chr2 53160360 53160799 -200095784 - L1ME3A LINE L1 -2144 4071 3579 307 280 32 24 chr2 53160805 53160930 -200095653 - L1ME3A LINE L1 -2820 3395 3270 2809 16 0 0 chr2 53160944 53161255 -200095328 - AluY SINE Alu 0 311 1 575 283 44 15 chr2 53161443 53161828 -200094755 - L1MEd LINE L1 -3709 2506 2152 364 287 87 71 chr2 53162040 53163044 -200093539 - L1MEd LINE L1 -4579 1817 798 308 360 18 0 chr2 53164027 53164141 -200092442 + L2 LINE L2 3154 3269 -3 205 244 0 0 chr2 53165425 53165470 -200091113 - MER5B DNA MER1_type -7 171 127 8331 181 23 26 chr2 53165514 53165879 -200090704 - L1MA6 LINE L1 -1 6299 5934 1698 170 18 4 chr2 53165879 53166155 -200090428 - AluSx SINE Alu -32 280 1 8331 181 23 26 chr2 53166155 53166912 -200089671 - L1MA6 LINE L1 -366 5934 5176 1356 114 53 40 chr2 53166912 53167008 -200089575 - MER30 DNA MER1_type 0 230 137 2534 37 3 0 chr2 53167008 53167307 -200089276 + AluY SINE Alu 1 300 -11 1356 114 53 40 chr2 53167307 53167437 -200089146 - MER30 DNA MER1_type -93 137 1 8331 181 23 26 chr2 53167437 53168979 -200087604 - L1MA6 LINE L1 -1124 5176 3632 1887 174 3 0 chr2 53169234 53169544 -200087039 + AluJb SINE Alu 1 311 -1 649 228 72 91 chr2 53170132 53170408 -200086175 + MER96B DNA MER1_type? 1 271 -146 1220 228 67 35 chr2 53170438 53170723 -200085860 - AluJb SINE Alu -8 294 1 296 250 16 0 chr2 53170723 53170787 -200085796 + MER96B DNA MER1_type? 353 417 0 365 327 53 27 chr2 53171646 53171796 -200084787 + MER5A DNA MER1_type 36 189 0 202 230 11 46 chr2 53172309 53172396 -200084187 + (TCTA)n Simple_repeat Simple_repeat 2 85 0 582 188 9 0 chr2 53172524 53172636 -200083947 - L1MA4 LINE L1 -73 6227 6115 1101 242 59 52 chr2 53173508 53173966 -200082617 - L1MC5 LINE L1 -530 7431 6971 340 253 124 27 chr2 53174273 53174459 -200082124 - L1MC5 LINE L1 -785 7176 6973 401 311 27 7 chr2 53174464 53174612 -200081971 + MLT1H LTR MaLR 12 162 -387 269 239 15 0 chr2 53174832 53174899 -200081684 + MLT1H LTR MaLR 458 525 -24 766 265 18 19 chr2 53174947 53175256 -200081327 - L1MC5 LINE L1 -970 7072 6685 29 47 0 0 chr2 53175363 53175406 -200081177 + AT_rich Low_complexity Low_complexity 1 43 0 901 269 105 53 chr2 53175635 53176242 -200080341 - L1MC4a LINE L1 -1633 6175 5537 2267 257 61 23 chr2 53176597 53177248 -200079335 + L1ME2 LINE L1 4999 5719 -445 2455 77 0 3 chr2 53177248 53177560 -200079023 + AluY SINE Alu 1 311 0 2267 257 61 23 chr2 53177560 53177999 -200078584 + L1ME2 LINE L1 5719 6140 -24 9054 243 32 35 chr2 53178250 53180089 -200076494 + L1MB5 LINE L1 2286 4129 -2045 387 0 0 0 chr2 53180089 53180132 -200076451 + (CA)n Simple_repeat Simple_repeat 2 44 0 9054 243 32 35 chr2 53180132 53180507 -200076076 + L1MB5 LINE L1 4129 4504 -1670 1500 208 0 10 chr2 53180507 53180796 -200075787 + AluJb SINE Alu 1 286 -26 9054 243 32 35 chr2 53180796 53182472 -200074111 + L1MB5 LINE L1 4504 6166 -8 23 0 0 0 chr2 53182614 53182637 -200073946 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr2 53183195 53183219 -200073364 + AT_rich Low_complexity Low_complexity 1 24 0 25 51 0 0 chr2 53183282 53183321 -200073262 + AT_rich Low_complexity Low_complexity 1 39 0 220 278 61 61 chr2 53183694 53183809 -200072774 - MIR SINE MIR -2 260 146 349 333 14 43 chr2 53183862 53184000 -200072583 - MIR SINE MIR -112 150 17 28 0 0 0 chr2 53185114 53185142 -200071441 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 53185831 53185855 -200070728 + AT_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr2 53186828 53186863 -200069720 + AT_rich Low_complexity Low_complexity 1 35 0 243 137 157 0 chr2 53187574 53187625 -200068958 - L1ME3 LINE L1 -64 6098 6040 1625 270 53 34 chr2 53187635 53188020 -200068563 - L1ME3 LINE L1 -204 5960 5584 825 307 58 25 chr2 53188020 53188466 -200068117 - LTR16B LTR ERVL -2 462 2 1625 270 53 34 chr2 53188466 53189170 -200067413 - L1ME3 LINE L1 -580 5584 4844 526 313 120 5 chr2 53189181 53189389 -200067194 - MIR SINE MIR -27 235 4 896 98 15 0 chr2 53189551 53189684 -200066899 - L1PA11 LINE L1 -2 6172 6038 236 259 105 56 chr2 53190199 53190361 -200066222 - L1ME4a LINE L1 -6 6115 5946 215 250 0 0 chr2 53190362 53190406 -200066177 + (TATATG)n Simple_repeat Simple_repeat 2 45 0 252 319 22 30 chr2 53191190 53191325 -200065258 - MER104 DNA Tc2 0 180 47 255 317 78 0 chr2 53191773 53191865 -200064718 - MIR SINE MIR -65 143 59 1625 178 3 48 chr2 53192039 53192353 -200064230 - AluJo SINE Alu -12 300 1 226 318 80 20 chr2 53193310 53193461 -200063122 + LTR16C LTR ERVL 332 491 0 22 0 0 0 chr2 53194097 53194119 -200062464 + AT_rich Low_complexity Low_complexity 1 22 0 273 243 14 0 chr2 53194162 53194236 -200062347 - L1MA9 LINE L1 0 6312 6238 1966 131 168 20 chr2 53194278 53194630 -200061953 - MER4A LTR ERV1 0 664 261 633 121 0 10 chr2 53194630 53194729 -200061854 - MER4A LTR ERV1 -566 98 1 2309 87 15 102 chr2 53194754 53195166 -200061417 - MER4A-int LTR ERV1 -2 6596 6221 309 75 0 0 chr2 53195171 53195211 -200061372 - MER4A LTR ERV1 -624 40 1 591 164 0 25 chr2 53195215 53195337 -200061246 - L1MA9 LINE L1 -147 6165 6047 728 354 82 36 chr2 53195531 53196473 -200060110 - L2 LINE L2 -609 2705 1808 2312 81 0 3 chr2 53196473 53196771 -200059812 - AluY SINE Alu -4 307 11 728 354 82 36 chr2 53196771 53196794 -200059789 - L2 LINE L2 -1506 1808 1788 3648 91 5 74 chr2 53196794 53197267 -200059316 + MER41A LTR ERV1 1 426 -128 2466 63 0 3 chr2 53197267 53197570 -200059013 - AluSc SINE Alu -7 302 1 3648 91 5 74 chr2 53197570 53197691 -200058892 + MER41A LTR ERV1 426 554 0 728 354 82 36 chr2 53197691 53197941 -200058642 - L2 LINE L2 -1526 1788 1433 1919 141 0 0 chr2 53198150 53198434 -200058149 - AluSq SINE Alu -29 284 1 2419 72 3 0 chr2 53199090 53199396 -200057187 + AluY SINE Alu 1 307 -4 300 212 0 0 chr2 53199797 53199863 -200056720 + GA-rich Low_complexity Low_complexity 2 67 0 629 272 51 51 chr2 53200536 53200753 -200055830 - MIR SINE MIR 0 262 46 881 320 87 33 chr2 53200901 53201292 -200055291 + LTR16C LTR ERVL 72 483 -8 32 81 0 0 chr2 53201788 53201862 -200054721 + AT_rich Low_complexity Low_complexity 1 74 0 24 67 0 0 chr2 53202028 53202073 -200054510 + AT_rich Low_complexity Low_complexity 1 45 0 22 80 0 0 chr2 53202417 53202467 -200054116 + AT_rich Low_complexity Low_complexity 1 50 0 27 0 0 0 chr2 53203489 53203516 -200053067 + AT_rich Low_complexity Low_complexity 1 27 0 791 217 19 0 chr2 53203646 53203807 -200052776 + FAM SINE Alu 5 168 -7 2107 155 77 32 chr2 53204971 53205410 -200051173 + LTR2B LTR ERV1 32 490 0 615 257 35 20 chr2 53205410 53205598 -200050985 - MER34 LTR ERV1 -351 191 1 197 33 33 0 chr2 53206543 53206573 -200050010 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 250 315 0 0 chr2 53207782 53207855 -200048728 + (TG)n Simple_repeat Simple_repeat 2 74 0 668 346 11 19 chr2 53208004 53208264 -200048319 - MIR SINE MIR -3 259 2 218 209 45 30 chr2 53208672 53208739 -200047844 - L3 LINE CR1 -73 1504 1437 481 229 29 97 chr2 53208805 53208980 -200047603 + LTR33A LTR ERVL 6 168 -355 755 229 74 13 chr2 53209022 53209253 -200047330 + LTR33A LTR ERVL 279 523 0 639 237 0 0 chr2 53209337 53209499 -200047084 - FLAM_C SINE Alu 0 164 3 250 316 96 17 chr2 53210267 53210444 -200046139 - L2 LINE L2 -10 3303 3113 1096 224 58 7 chr2 53210831 53211125 -200045458 - L1MD3 LINE L1 -937 7058 6750 1903 193 38 92 chr2 53211138 53211661 -200044922 + LTR42 LTR ERVL 1 495 0 598 326 42 61 chr2 53212792 53213594 -200042989 + LTR57-int LTR ERVL 1856 2556 -2787 276 323 26 39 chr2 53213625 53213780 -200042803 + LTR57-int LTR ERVL 2779 2931 -3116 2451 155 35 19 chr2 53213958 53214390 -200042193 - Tigger2 DNA MER2_type 0 2718 2280 405 229 12 0 chr2 53214383 53214466 -200042117 - Tigger2 DNA MER2_type -2634 84 1 * 261 326 29 29 chr2 53214539 53214714 -200041869 + LTR57-int LTR ERVL 3276 3450 -2597 1862 235 24 53 chr2 53217494 53218004 -200038579 + LTR42 LTR ERVL 1 495 0 1500 229 40 34 chr2 53218005 53218451 -200038132 - L1MC3 LINE L1 -1078 6707 6259 221 374 65 9 chr2 53218879 53218986 -200037597 + L2 LINE L2 3104 3216 -56 1448 184 24 17 chr2 53221533 53221855 -200034728 + AluJo SINE Alu 1 324 0 828 246 32 0 chr2 53222630 53222817 -200033766 - MER58A DNA MER1_type -31 193 1 1694 180 10 0 chr2 53223338 53223627 -200032956 - AluSx SINE Alu -20 292 1 356 351 26 0 chr2 53223779 53223893 -200032690 + MIR SINE MIR 41 157 -105 181 356 11 11 chr2 53224107 53224197 -200032386 - MIR SINE MIR -117 145 56 328 269 13 0 chr2 53224981 53225059 -200031524 - MLT1L LTR MaLR -536 79 1 358 331 57 6 chr2 53226030 53226187 -200030396 + MIR SINE MIR 83 247 -15 243 79 0 0 chr2 53226903 53226941 -200029642 + (CA)n Simple_repeat Simple_repeat 1 38 0 316 277 58 58 chr2 53227331 53227486 -200029097 + MLT1K LTR MaLR 131 285 -303 257 302 153 26 chr2 53227861 53228050 -200028533 - L2 LINE L2 -191 3081 2869 21 0 0 0 chr2 53228216 53228237 -200028346 + AT_rich Low_complexity Low_complexity 1 21 0 357 314 73 39 chr2 53229470 53229766 -200026817 + L2 LINE L2 2780 3083 -189 188 300 83 17 chr2 53229839 53229899 -200026684 + L2 LINE L2 3245 3308 -5 29 60 0 0 chr2 53230819 53230869 -200025714 + AT_rich Low_complexity Low_complexity 1 50 0 199 285 161 0 chr2 53231162 53231292 -200025291 + MIR SINE MIR 112 262 0 34 0 0 0 chr2 53231719 53231753 -200024830 + AT_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr2 53232294 53232316 -200024267 + AT_rich Low_complexity Low_complexity 1 22 0 542 268 0 0 chr2 53233484 53233611 -200022972 + FLAM_A SINE Alu 7 133 -9 541 296 35 51 chr2 53234160 53234417 -200022166 + L2 LINE L2 2703 2955 -359 430 345 77 41 chr2 53234442 53234688 -200021895 + MIR SINE MIR 8 262 0 563 303 82 23 chr2 53234737 53235041 -200021542 + L2 LINE L2 2991 3312 -1 2892 179 5 11 chr2 53235371 53235930 -200020653 + L1MB1 LINE L1 5612 6167 -1 297 203 114 114 chr2 53237203 53237326 -200019257 + MIR SINE MIR 37 159 -103 27 29 0 0 chr2 53237374 53237408 -200019175 + AT_rich Low_complexity Low_complexity 1 34 0 2337 86 0 32 chr2 53237615 53237929 -200018654 - AluY SINE Alu -7 304 1 429 306 80 104 chr2 53237991 53238377 -200018206 + L2 LINE L2 2895 3271 -1 2054 148 34 3 chr2 53238510 53238867 -200017716 - Tigger2 DNA MER2_type -1 2717 2350 693 179 0 45 chr2 53238870 53239004 -200017579 - Tigger2 DNA MER2_type -2590 128 1 2216 168 57 2 chr2 53239062 53239466 -200017117 + MSTB LTR MaLR 1 426 0 10762 141 15 19 chr2 53239481 53241186 -200015397 + HERVL LTR ERVL 3063 4760 -894 1478 242 128 31 chr2 53241186 53241873 -200014710 + L1ME1 LINE L1 1826 2639 -4082 599 200 32 7 chr2 53241876 53242031 -200014552 + L1ME1 LINE L1 4988 5146 -1394 242 217 17 0 chr2 53242019 53242079 -200014504 - L1M4 LINE L1 -1449 4697 4637 * 2178 214 62 82 chr2 53242055 53242332 -200014251 + L1ME1 LINE L1 5324 5605 -955 1661 31 0 0 chr2 53242332 53242526 -200014057 + L1PA3 LINE L1 5957 6150 -5 2178 214 62 82 chr2 53242526 53243503 -200013080 + L1ME1 LINE L1 5605 6556 -4 348 332 123 41 chr2 53244227 53244567 -200012016 - L2 LINE L2 0 3313 2946 314 248 80 29 chr2 53244714 53244851 -200011732 + MLT1J1 LTR MaLR 289 432 -14 1312 187 11 7 chr2 53245741 53246014 -200010569 - L1MB2 LINE L1 0 6171 5898 224 164 45 15 chr2 53246561 53246628 -200009955 + (TA)n Simple_repeat Simple_repeat 1 69 0 190 349 119 47 chr2 53247569 53247996 -200008587 - L2 LINE L2 -531 2783 2326 23 0 0 0 chr2 53248163 53248186 -200008397 + AT_rich Low_complexity Low_complexity 1 23 0 232 266 58 75 chr2 53248189 53248367 -200008216 - MIR SINE MIR -56 206 32 701 186 68 0 chr2 53248588 53248765 -200007818 + Charlie1 DNA MER1_type 2382 2570 -191 832 39 0 0 chr2 53248768 53248872 -200007711 - L1PA4 LINE L1 0 6155 6052 2301 115 0 0 chr2 53248930 53249235 -200007348 + AluSx SINE Alu 5 309 -3 212 250 0 113 chr2 53249285 53249365 -200007218 - MIR SINE MIR -30 232 162 402 300 10 4 chr2 53249406 53249525 -200007058 + MIR SINE MIR 48 165 -43 727 221 149 17 chr2 53249553 53249734 -200006849 + MER97b DNA MER1_type? 4 208 -845 412 325 53 16 chr2 53249804 53249992 -200006591 + LTR16A LTR ERVL 242 436 -14 216 0 0 0 chr2 53250108 53250132 -200006451 + (TA)n Simple_repeat Simple_repeat 1 24 0 * 222 37 0 0 chr2 53250131 53250158 -200006425 + (CA)n Simple_repeat Simple_repeat 2 28 0 326 267 133 44 chr2 53250724 53250904 -200005679 + L2 LINE L2 3113 3308 -5 336 276 64 76 chr2 53251231 53251481 -200005102 - MIR SINE MIR -2 260 14 2485 243 50 42 chr2 53251742 53252538 -200004045 + L1ME2 LINE L1 5335 6137 -27 2122 152 25 3 chr2 53252540 53252896 -200003687 + THE1B LTR MaLR 1 364 0 9778 115 36 41 chr2 53252909 53254480 -200002103 + THE1B-int LTR MaLR 19 1580 0 2021 157 40 0 chr2 53254480 53254830 -200001753 + THE1B LTR MaLR 1 364 0 3061 159 46 44 chr2 53255844 53256566 -200000017 + L1MA6 LINE L1 5573 6295 -5 32 75 0 0 chr2 53257534 53257601 -199998982 + AT_rich Low_complexity Low_complexity 1 67 0 392 307 27 27 chr2 53257662 53257812 -199998771 + MIR SINE MIR 2 151 -111 419 226 8 0 chr2 53257862 53257995 -199998588 + (TA)n Simple_repeat Simple_repeat 1 134 0 255 207 60 17 chr2 53258144 53258260 -199998323 + (TA)n Simple_repeat Simple_repeat 2 122 0 23 54 0 0 chr2 53258342 53258379 -199998204 + AT_rich Low_complexity Low_complexity 1 37 0 1283 269 90 73 chr2 53258469 53258978 -199997605 + L2 LINE L2 2194 2693 -620 2392 63 0 22 chr2 53258978 53259293 -199997290 + AluY SINE Alu 1 308 -3 1283 269 90 73 chr2 53259293 53259879 -199996704 + L2 LINE L2 2693 3313 0 357 358 101 0 chr2 53262160 53262378 -199994205 + MIR SINE MIR 18 257 -5 209 409 36 0 chr2 53262482 53262592 -199993991 + L3 LINE CR1 191 304 -1273 1083 232 46 11 chr2 53262748 53263119 -199993464 - Zaphod DNA AcHobo -61 3970 3587 53 81 0 0 chr2 53263146 53263269 -199993314 + AT_rich Low_complexity Low_complexity 1 123 0 992 250 56 90 chr2 53263319 53263839 -199992744 - L1MC4 LINE L1 -1 8041 7546 204 97 0 0 chr2 53263839 53263870 -199992713 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 992 250 56 90 chr2 53263870 53263993 -199992590 - L1MC4 LINE L1 -496 7546 7420 1434 216 60 17 chr2 53264005 53264357 -199992226 - MLT1A2 LTR MaLR -2 372 6 467 254 45 0 chr2 53264455 53264589 -199991994 - L1MC/D LINE L1 -2067 5741 5602 499 315 74 45 chr2 53264964 53265409 -199991174 - L1MC/D LINE L1 -2990 3156 2699 450 101 0 0 chr2 53265411 53265480 -199991103 + (TCTA)n Simple_repeat Simple_repeat 2 70 0 1504 199 21 18 chr2 53265480 53265762 -199990821 - AluJb SINE Alu -29 283 1 232 254 0 0 chr2 53265978 53266033 -199990550 - MER20 DNA MER1_type 0 219 165 425 284 46 44 chr2 53266213 53266453 -199990130 - L1ME LINE L1 -455 5707 5467 24 53 0 0 chr2 53267226 53267264 -199989319 + AT_rich Low_complexity Low_complexity 1 38 0 387 307 94 73 chr2 53267336 53267773 -199988810 - L1ME4a LINE L1 -102 6019 5574 428 327 59 33 chr2 53267777 53267930 -199988653 - L2 LINE L2 0 3272 3116 514 302 54 45 chr2 53268003 53268225 -199988358 - MIR SINE MIR -27 235 12 8886 129 75 43 chr2 53269256 53270900 -199985683 - pTR5 LTR ERV1 0 2438 743 201 325 171 0 chr2 53271178 53271301 -199985282 + L3b LINE CR1 1434 1577 -6 3574 185 43 3 chr2 53271785 53272440 -199984143 - MER54B LTR ERVL -112 681 1 368 293 72 48 chr2 53278794 53279002 -199977581 + MLT1K LTR MaLR 375 587 -1 402 211 12 0 chr2 53280173 53280268 -199976315 - L1MD3 LINE L1 -8 7987 7680 725 255 93 32 chr2 53281221 53281468 -199975115 + MSTD LTR MaLR 135 396 0 22 0 0 0 chr2 53282090 53282112 -199974471 + AT_rich Low_complexity Low_complexity 1 22 0 1888 131 3 6 chr2 53282987 53283301 -199973282 - HSMAR2 DNA Mariner -2 1300 988 337 279 18 9 chr2 53283659 53283770 -199972813 - MIR SINE MIR -1 261 150 10143 139 30 8 chr2 53283780 53285422 -199971161 - L1PBa LINE L1 -5185 1678 1 386 264 27 9 chr2 53285431 53285541 -199971042 + MIR SINE MIR 150 261 -1 21 0 0 0 chr2 53286683 53286704 -199969879 + AT_rich Low_complexity Low_complexity 1 21 0 934 162 109 5 chr2 53286801 53287011 -199969572 - L1MCb LINE L1 -4886 1021 790 1822 249 48 35 chr2 53287034 53287148 -199969435 - L1MCb LINE L1 -5801 625 514 1624 88 8 38 chr2 53287148 53287388 -199969195 - AluSc SINE Alu -5 304 72 1822 249 48 35 chr2 53287388 53287871 -199968712 - L1MCb LINE L1 -5912 514 20 797 280 132 41 chr2 53287998 53288391 -199968192 + MLT1J2 LTR MaLR 22 450 0 250 385 54 23 chr2 53288606 53288736 -199967847 + L2 LINE L2 2941 3074 -198 259 317 237 11 chr2 53289332 53289518 -199967065 + MIR SINE MIR 3 230 -32 241 211 0 0 chr2 53291467 53291524 -199965059 + L1MC4 LINE L1 6647 6703 -1339 183 205 0 0 chr2 53292307 53292346 -199964237 + (TATATG)n Simple_repeat Simple_repeat 1 39 0 3286 146 6 22 chr2 53293396 53293932 -199962651 + MER1A DNA MER1_type 1 527 0 192 40 0 0 chr2 53294162 53294187 -199962396 + (TA)n Simple_repeat Simple_repeat 2 26 0 189 242 70 127 chr2 53294276 53294433 -199962150 - L2 LINE L2 -8 3305 3158 13059 126 110 19 chr2 53294769 53296662 -199959921 + L1PB1 LINE L1 2 2154 -4709 180 0 0 0 chr2 53296662 53296682 -199959901 + (CAA)n Simple_repeat Simple_repeat 2 21 0 13059 126 110 19 chr2 53296682 53297144 -199959439 + L1PB1 LINE L1 2154 2572 -4291 4327 67 27 34 chr2 53297144 53298195 -199958388 + MER11A LTR ERVK 3 1266 0 13002 182 45 15 chr2 53298195 53302273 -199954310 + L1PB1 LINE L1 2568 6788 -79 226 278 42 14 chr2 53302329 53302401 -199954182 - L1ME3A LINE L1 -99 6054 5981 848 262 70 34 chr2 53302507 53302985 -199953598 - L1ME3A LINE L1 -316 5837 5314 2357 273 122 40 chr2 53302990 53303064 -199953519 - L1ME3A LINE L1 -1460 4669 4602 198 71 0 0 chr2 53303064 53303092 -199953491 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 2357 273 122 40 chr2 53303092 53303704 -199952879 - L1ME3A LINE L1 -1527 4602 4041 901 158 41 6 chr2 53303704 53303875 -199952708 + L1PA13 LINE L1 5985 6161 -2 2357 273 122 40 chr2 53303875 53304081 -199952502 - L1ME3A LINE L1 -2088 4041 3853 402 21 0 0 chr2 53304081 53304128 -199952455 + (TG)n Simple_repeat Simple_repeat 2 48 0 2357 273 122 40 chr2 53304128 53305140 -199951443 - L1ME3A LINE L1 -2276 3853 2529 2483 60 0 3 chr2 53305140 53305440 -199951143 - AluY SINE Alu -12 299 1 2357 273 122 40 chr2 53305440 53305904 -199950679 - L1ME3A LINE L1 -3600 2529 2104 25 31 0 0 chr2 53305957 53305989 -199950594 + AT_rich Low_complexity Low_complexity 1 32 0 3126 189 15 27 chr2 53306038 53306707 -199949876 + MER39 LTR ERV1 1 702 -5 184 140 75 0 chr2 53306866 53306973 -199949610 + (TA)n Simple_repeat Simple_repeat 2 116 0 20708 188 32 26 chr2 53306973 53309382 -199947201 - L1PA11 LINE L1 -6 7606 5214 234 0 0 0 chr2 53309382 53309408 -199947175 + (TTG)n Simple_repeat Simple_repeat 3 28 0 20708 188 32 26 chr2 53309408 53313761 -199942822 - L1PA11 LINE L1 -2398 5214 10 375 343 36 4 chr2 53313801 53314078 -199942505 - L1ME3A LINE L1 -4579 1731 1446 376 311 70 63 chr2 53314109 53314810 -199941773 - L1ME3A LINE L1 -4938 1372 568 511 268 136 26 chr2 53315735 53315817 -199940766 + MIR SINE MIR 9 81 -181 1941 182 70 22 chr2 53315817 53316263 -199940320 + MLT1C LTR MaLR 1 467 0 511 268 136 26 chr2 53316263 53316408 -199940175 + MIR SINE MIR 81 261 -1 279 353 17 8 chr2 53316829 53316948 -199939635 + MIR3 SINE MIR 50 169 -39 209 369 19 0 chr2 53317799 53317902 -199938681 - L3 LINE CR1 -379 1198 1094 22 0 0 0 chr2 53318071 53318093 -199938490 + AT_rich Low_complexity Low_complexity 1 22 0 497 191 9 19 chr2 53320313 53320537 -199936046 + CT-rich Low_complexity Low_complexity 1 221 0 269 269 21 76 chr2 53320920 53321065 -199935518 + MIR SINE MIR 80 216 -46 294 247 12 12 chr2 53321392 53321473 -199935110 - MLT1H-int LTR MaLR -1276 95 15 271 361 23 0 chr2 53321491 53321624 -199934959 - MLT1H LTR MaLR -5 585 450 466 256 193 22 chr2 53321734 53321957 -199934626 - MLT1H LTR MaLR -286 263 3 227 224 0 0 chr2 53322143 53322192 -199934391 + L2 LINE L2 3265 3313 0 1820 141 23 10 chr2 53322436 53322741 -199933842 - L1PA15 LINE L1 0 6165 5857 2127 109 0 0 chr2 53323613 53323940 -199932643 - AluSx SINE Alu 0 327 1 409 0 39 0 chr2 53324727 53324779 -199931804 + L1PA6 LINE L1 6101 6154 0 1034 109 0 0 chr2 53324779 53324924 -199931659 + L1PB1 LINE L1 6003 6149 -2 297 0 0 0 chr2 53324942 53324975 -199931608 + (TA)n Simple_repeat Simple_repeat 1 33 0 2219 95 0 0 chr2 53326004 53326322 -199930261 - AluY SINE Alu 0 318 1 1996 93 0 31 chr2 53326444 53326734 -199929849 + AluY SINE Alu 31 311 0 253 239 0 28 chr2 53326860 53326931 -199929652 + GA-rich Low_complexity Low_complexity 4 72 0 242 362 59 13 chr2 53328469 53328621 -199927962 - MIR3 SINE MIR 0 208 50 300 128 0 0 chr2 53328626 53328673 -199927910 + L1ME LINE L1 5725 5771 -393 247 289 99 46 chr2 53328717 53328869 -199927714 - MLT1K LTR MaLR -414 174 15 500 296 106 16 chr2 53329141 53329355 -199927228 - MIR SINE MIR -18 244 15 396 278 86 69 chr2 53330194 53330582 -199926001 - LTR33A LTR ERVL -8 515 37 189 268 37 37 chr2 53330675 53330757 -199925826 - L3b LINE CR1 -131 1452 1371 21 57 0 0 chr2 53330758 53330793 -199925790 + AT_rich Low_complexity Low_complexity 1 35 0 238 327 196 26 chr2 53331415 53331463 -199925120 + LTR16C LTR ERVL 181 220 -271 2122 134 0 0 chr2 53331463 53331762 -199924821 - AluSq SINE Alu -14 299 1 238 327 196 26 chr2 53331762 53331979 -199924604 + LTR16C LTR ERVL 220 491 0 224 125 0 54 chr2 53331992 53332048 -199924535 + (TTTTTA)n Simple_repeat Simple_repeat 3 55 0 186 253 108 72 chr2 53332136 53332219 -199924364 - MIR SINE MIR -90 172 87 615 249 91 19 chr2 53333493 53333702 -199922881 + MER58A DNA MER1_type 1 224 0 207 100 0 0 chr2 53334403 53334433 -199922150 + (T)n Simple_repeat Simple_repeat 1 30 0 2881 178 10 27 chr2 53334436 53334959 -199921624 - MER72 LTR ERV1 -208 514 1 1885 207 103 74 chr2 53334959 53335592 -199920991 - MER72-int LTR ERV1 -1 6757 6107 528 337 6 12 chr2 53335631 53335800 -199920783 - MIR3 SINE MIR -24 184 17 23 0 0 0 chr2 53335846 53335869 -199920714 + AT_rich Low_complexity Low_complexity 1 23 0 2183 96 3 0 chr2 53335907 53336220 -199920363 - AluY SINE Alu 0 314 1 271 307 44 66 chr2 53336747 53336884 -199919699 - L3 LINE CR1 -127 1450 1317 213 305 129 13 chr2 53339966 53340109 -199916474 - MIR SINE MIR -75 133 35 259 274 89 16 chr2 53340198 53340322 -199916261 - HAL1b LINE L1 -2 1346 1214 392 246 33 8 chr2 53340358 53340480 -199916103 - MLT1A1 LTR MaLR -50 315 191 517 243 126 33 chr2 53340493 53340819 -199915764 - LTR43 LTR ERV1 -59 470 187 847 142 18 71 chr2 53341179 53341304 -199915279 - MLT1A1 LTR MaLR -205 160 45 2101 116 34 0 chr2 53341304 53341596 -199914987 - AluSx SINE Alu -10 302 1 847 142 18 71 chr2 53341596 53341639 -199914944 - MLT1A1 LTR MaLR -320 45 1 214 267 11 22 chr2 53341932 53342022 -199914561 + GA-rich Low_complexity Low_complexity 1 89 0 1612 226 18 28 chr2 53342883 53343073 -199913510 - MLT1B LTR MaLR -5 385 195 2190 117 3 3 chr2 53343073 53343373 -199913210 - AluSx SINE Alu -12 300 1 1612 226 18 28 chr2 53343373 53343571 -199913012 - MLT1B LTR MaLR -195 195 1 313 303 176 24 chr2 53344308 53344473 -199912110 - HERV16 LTR ERVL -1803 3961 3732 1701 337 56 14 chr2 53344945 53346292 -199910291 - HERV16 LTR ERVL -2178 2818 1682 2379 321 72 50 chr2 53346333 53347458 -199909125 - HERV16 LTR ERVL -3420 1576 409 2102 108 3 11 chr2 53347458 53347766 -199908817 + AluSq SINE Alu 1 306 0 2379 321 72 50 chr2 53347766 53348135 -199908448 - HERV16 LTR ERVL -4587 409 49 579 347 68 41 chr2 53348188 53348578 -199908005 - LTR16A LTR ERVL -18 432 43 3220 27 0 0 chr2 53348638 53349009 -199907574 - L1PA3 LINE L1 -288 5867 5497 1062 60 0 0 chr2 53349009 53349138 -199907445 + L1PA3 LINE L1 6017 6149 -6 302 206 59 39 chr2 53351017 53351119 -199905464 + MIR SINE MIR 52 155 -107 229 337 54 0 chr2 53351463 53351555 -199905028 + MIR SINE MIR 100 196 -66 2966 134 14 26 chr2 53351605 53351864 -199904719 + LTR26E LTR ERV1 135 396 -226 2421 132 19 8 chr2 53351864 53352235 -199904348 - THE1C LTR MaLR 0 375 1 10191 112 53 4 chr2 53352235 53353740 -199902843 - THE1C-int LTR MaLR 0 1580 2 2031 146 83 11 chr2 53353741 53354091 -199902492 - THE1C LTR MaLR 0 375 1 2966 134 14 26 chr2 53354091 53354322 -199902261 + LTR26E LTR ERV1 394 622 0 23 54 0 0 chr2 53354600 53354637 -199901946 + AT_rich Low_complexity Low_complexity 1 37 0 771 230 129 30 chr2 53355613 53355974 -199900609 - L1M4 LINE L1 -5112 1430 1017 23 0 0 0 chr2 53357738 53357761 -199898822 + AT_rich Low_complexity Low_complexity 1 23 0 263 317 20 10 chr2 53357919 53358020 -199898563 + MIR SINE MIR 53 154 -108 188 200 17 0 chr2 53358026 53358086 -199898497 + (TA)n Simple_repeat Simple_repeat 1 61 0 218 284 0 0 chr2 53358133 53358200 -199898383 + MIR SINE MIR 195 261 -1 23 33 0 0 chr2 53358293 53358323 -199898260 + AT_rich Low_complexity Low_complexity 1 30 0 1791 68 0 17 chr2 53358416 53358650 -199897933 + AluY SINE Alu 73 302 -9 196 343 89 34 chr2 53358653 53358799 -199897784 - MIR3 SINE MIR -40 168 15 472 304 88 9 chr2 53359707 53359924 -199896659 + MIR SINE MIR 29 262 0 2175 97 31 3 chr2 53360211 53360335 -199896248 + AluSc SINE Alu 1 120 -189 383 0 21 0 chr2 53360335 53360382 -199896201 + (CAAAA)n Simple_repeat Simple_repeat 5 52 0 2175 97 31 3 chr2 53360382 53360545 -199896038 + AluSc SINE Alu 120 296 -13 197 353 69 0 chr2 53360581 53360683 -199895900 + L2 LINE L2 3197 3305 -8 183 250 97 14 chr2 53360797 53360869 -199895714 - MIR3 SINE MIR -2 206 129 1284 236 128 40 chr2 53360875 53361494 -199895089 - L1MC4 LINE L1 -1 8041 7369 629 241 174 5 chr2 53361587 53361811 -199894772 - L1MC4 LINE L1 -956 7086 6825 23 33 0 0 chr2 53361879 53361909 -199894674 + AT_rich Low_complexity Low_complexity 1 30 0 252 184 0 0 chr2 53361927 53361976 -199894607 + (TA)n Simple_repeat Simple_repeat 1 49 0 27 0 0 0 chr2 53364297 53364324 -199892259 + AT_rich Low_complexity Low_complexity 1 27 0 22 56 0 0 chr2 53364344 53364380 -199892203 + AT_rich Low_complexity Low_complexity 1 36 0 1668 210 79 23 chr2 53365619 53366061 -199890522 - MLT1C LTR MaLR 0 467 1 201 250 21 0 chr2 53366569 53366617 -199889966 + (TG)n Simple_repeat Simple_repeat 2 50 0 27 96 0 0 chr2 53366894 53366977 -199889606 + AT_rich Low_complexity Low_complexity 1 83 0 262 346 10 0 chr2 53368303 53368404 -199888179 + MIR SINE MIR 161 262 0 189 107 0 0 chr2 53368736 53368764 -199887819 + (TTA)n Simple_repeat Simple_repeat 2 29 0 1994 125 4 0 chr2 53368766 53369045 -199887538 - AluSx SINE Alu -32 280 1 22 0 0 0 chr2 53369392 53369414 -199887169 + AT_rich Low_complexity Low_complexity 1 22 0 13211 195 45 23 chr2 53369716 53376565 -199880018 + L1MA4A LINE L1 4 6993 -12 33 0 0 0 chr2 53376567 53376600 -199879983 + AT_rich Low_complexity Low_complexity 1 33 0 632 104 0 0 chr2 53377695 53377791 -199878792 + L1MA1 LINE L1 6207 6302 0 31 44 0 0 chr2 53377792 53377837 -199878746 + AT_rich Low_complexity Low_complexity 1 45 0 421 155 31 19 chr2 53378977 53379138 -199877445 + (TA)n Simple_repeat Simple_repeat 2 164 0 251 315 93 0 chr2 53379343 53379451 -199877132 + MIR SINE MIR 125 242 -20 286 224 0 15 chr2 53380717 53380851 -199875732 + (TA)n Simple_repeat Simple_repeat 2 133 0 307 143 0 0 chr2 53380894 53380950 -199875633 - L1MC4 LINE L1 -1350 6692 6637 1433 237 27 3 chr2 53381095 53381428 -199875155 + MER58B DNA MER1_type 1 341 0 2065 96 105 8 chr2 53381748 53382114 -199874469 - LTR7 LTR ERV1 0 450 1 610 197 53 0 chr2 53382332 53382464 -199874119 - MIR SINE MIR -13 249 111 21 0 0 0 chr2 53383643 53383664 -199872919 + AT_rich Low_complexity Low_complexity 1 21 0 2026 135 6 3 chr2 53383664 53383976 -199872607 + AluSq SINE Alu 1 313 0 4500 168 18 50 chr2 53384110 53385043 -199871540 - MER4D LTR ERV1 0 903 1 30 0 0 0 chr2 53386372 53386402 -199870181 + AT_rich Low_complexity Low_complexity 1 30 0 1758 191 21 6 chr2 53386910 53387240 -199869343 - MLT2B1 LTR ERVL -185 335 1 191 254 107 66 chr2 53387395 53387449 -199869134 + MIR SINE MIR 136 186 -76 216 0 0 0 chr2 53387449 53387473 -199869110 + (TG)n Simple_repeat Simple_repeat 1 24 0 191 254 107 66 chr2 53387473 53387540 -199869043 + MIR SINE MIR 186 262 0 378 284 0 35 chr2 53387548 53387664 -199868919 - L2 LINE L2 -5 3308 3197 27 49 0 0 chr2 53388166 53388207 -199868376 + AT_rich Low_complexity Low_complexity 1 41 0 219 333 18 63 chr2 53388761 53388872 -199867711 - MIR SINE MIR -109 99 1 347 208 26 0 chr2 53388925 53389002 -199867581 - MLT1G1 LTR MaLR -515 80 2 298 306 51 84 chr2 53389004 53389279 -199867304 - MLT1G1-int LTR MaLR -1 1370 1105 385 319 54 25 chr2 53390000 53390279 -199866304 - MLT1G1-int LTR MaLR -793 578 292 253 297 51 17 chr2 53390281 53390399 -199866184 - MLT1G1-int LTR MaLR -1229 142 21 467 289 127 29 chr2 53390418 53390870 -199865713 - MLT1G1 LTR MaLR -18 577 16 2220 81 7 0 chr2 53391324 53391619 -199864964 - AluY SINE Alu -14 297 1 242 200 0 0 chr2 53392037 53392077 -199864506 - L2 LINE L2 -15 3298 3259 306 263 106 97 chr2 53392230 53392580 -199864003 - L1ME2 LINE L1 -83 6081 5729 2027 158 53 120 chr2 53393391 53393934 -199862649 - MER67D LTR ERV1 -7 507 1 308 262 33 66 chr2 53394021 53394143 -199862440 + MER20 DNA MER1_type 102 219 0 303 233 52 0 chr2 53394957 53395073 -199861510 + (TTA)n Simple_repeat Simple_repeat 3 124 0 786 322 178 53 chr2 53395202 53395271 -199861312 + L2 LINE L2 1699 1758 -1555 1463 264 30 35 chr2 53395271 53395779 -199860804 + MLT1D LTR MaLR 1 505 0 786 322 178 53 chr2 53395779 53396951 -199859632 + L2 LINE L2 1758 3161 -152 1888 121 64 0 chr2 53396951 53397232 -199859351 - AluSg SINE Alu -10 300 2 786 322 178 53 chr2 53397232 53397348 -199859235 + L2 LINE L2 3161 3261 -52 6193 103 12 28 chr2 53397407 53398393 -199858190 + L1P LINE L1 4128 5097 -1049 2809 16 3 0 chr2 53399606 53399923 -199856660 - AluYb8 SINE Alu 0 318 1 503 265 16 29 chr2 53400306 53400551 -199856032 - L1MC5 LINE L1 -111 7850 7609 21 36 0 0 chr2 53400905 53400933 -199855650 + AT_rich Low_complexity Low_complexity 1 28 0 290 289 81 85 chr2 53401875 53402110 -199854473 - MIR SINE MIR -9 253 20 410 312 102 86 chr2 53404910 53405352 -199851231 - L2 LINE L2 0 3272 2824 702 224 118 0 chr2 53405566 53405727 -199850856 + MER5A DNA MER1_type 1 180 -9 604 340 34 0 chr2 53406803 53407041 -199849542 - MIR SINE MIR -1 261 16 244 358 18 28 chr2 53407471 53407580 -199849003 + MIR SINE MIR 18 125 -83 821 280 42 13 chr2 53407883 53408390 -199848193 - MLT1E3 LTR MaLR 0 624 1 1524 188 57 38 chr2 53408723 53409091 -199847492 - THE1C LTR MaLR 0 375 1 317 345 18 48 chr2 53409342 53409510 -199847073 + MER5A DNA MER1_type 2 164 -25 289 344 13 52 chr2 53409373 53409527 -199847056 - MER5A DNA MER1_type -21 168 21 * 361 281 0 22 chr2 53409755 53409844 -199846739 - MIR3 SINE MIR -24 184 98 273 373 8 8 chr2 53411432 53411558 -199845025 - MIR3 SINE MIR -1 207 82 430 289 73 44 chr2 53412866 53413070 -199843513 + MIR SINE MIR 48 257 -5 285 89 0 0 chr2 53414014 53414059 -199842524 + (CA)n Simple_repeat Simple_repeat 2 46 0 315 49 0 0 chr2 53414580 53414621 -199841962 + (CA)n Simple_repeat Simple_repeat 2 42 0 285 29 0 0 chr2 53414620 53414654 -199841929 + (GA)n Simple_repeat Simple_repeat 2 35 0 * 306 265 99 21 chr2 53415367 53415625 -199840958 - MER110 LTR ERV1 -27 464 155 328 102 68 0 chr2 53415942 53416001 -199840582 + L1PA16 LINE L1 6100 6162 -4 423 0 0 0 chr2 53416752 53416799 -199839784 + (TC)n Simple_repeat Simple_repeat 2 48 0 379 319 109 33 chr2 53417642 53417946 -199838637 - Tigger8 DNA MER2_type -193 473 147 226 320 39 65 chr2 53418015 53418168 -199838415 + L2 LINE L2 3163 3311 -2 210 313 60 12 chr2 53419333 53419416 -199837167 - MIR SINE MIR -167 95 9 228 295 53 21 chr2 53420508 53420603 -199835980 - MER5A DNA MER1_type -56 133 36 1704 188 95 109 chr2 53421062 53421622 -199834961 - MLT2B1 LTR ERVL -2 518 1 21 36 0 0 chr2 53421909 53421937 -199834646 + AT_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr2 53422182 53422204 -199834379 + (TC)n Simple_repeat Simple_repeat 1 22 0 2154 113 10 0 chr2 53422406 53422707 -199833876 + AluSq SINE Alu 1 304 -9 239 306 93 42 chr2 53423719 53423912 -199832671 + L2 LINE L2 2482 2684 -630 584 311 0 7 chr2 53424138 53424286 -199832297 + MER63A DNA MER1_type 62 208 -2 252 320 66 113 chr2 53424333 53424786 -199831797 + L2 LINE L2 2821 3252 -20 203 250 0 0 chr2 53424853 53424897 -199831686 + L2 LINE L2 3223 3266 -6 403 186 40 34 chr2 53426270 53426447 -199830136 + (TA)n Simple_repeat Simple_repeat 2 179 0 288 218 5 78 chr2 53426370 53426563 -199830020 + (CATATA)n Simple_repeat Simple_repeat 2 180 0 * 23 0 0 0 chr2 53426702 53426725 -199829858 + AT_rich Low_complexity Low_complexity 1 23 0 711 264 101 56 chr2 53426839 53427160 -199829423 + L1M4 LINE L1 2506 2860 -3286 1774 179 0 3 chr2 53427160 53427457 -199829126 - AluJb SINE Alu -16 296 1 711 264 101 56 chr2 53427457 53427650 -199828933 + L1M4 LINE L1 2860 3043 -3103 23 68 0 0 chr2 53428083 53428127 -199828456 + AT_rich Low_complexity Low_complexity 1 44 0 751 151 28 4 chr2 53428154 53428366 -199828217 - MLT2B2 LTR ERVL -206 309 1 1826 271 78 17 chr2 53428384 53428963 -199827620 + L1M4 LINE L1 471 1084 -5775 5198 244 46 32 chr2 53429039 53430748 -199825835 + L1M4 LINE L1 3082 4824 -2133 2224 109 0 6 chr2 53430748 53431060 -199825523 + AluSp SINE Alu 1 310 -3 5198 244 46 32 chr2 53431060 53431330 -199825253 + L1M4 LINE L1 4824 5089 -1868 42791 44 7 5 chr2 53431437 53437561 -199819022 - L1PA4 LINE L1 -3 6152 15 600 312 41 24 chr2 53438206 53438623 -199817960 - HAL1 LINE L1 -838 1669 1246 210 291 123 89 chr2 53438636 53438815 -199817768 + MIR SINE MIR 31 215 -47 368 200 11 0 chr2 53438820 53438910 -199817673 + (TA)n Simple_repeat Simple_repeat 1 91 0 27 62 0 0 chr2 53439450 53439498 -199817085 + AT_rich Low_complexity Low_complexity 1 48 0 322 328 129 50 chr2 53439949 53440330 -199816253 + L3 LINE CR1 1165 1575 -2 858 259 35 4 chr2 53440586 53440814 -199815769 - MIR SINE MIR -21 241 7 4199 74 4 0 chr2 53441604 53442156 -199814427 - MER41A LTR ERV1 0 554 1 40 49 0 0 chr2 53442473 53442534 -199814049 + AT_rich Low_complexity Low_complexity 1 61 0 239 333 0 14 chr2 53443376 53443448 -199813135 - MIR SINE MIR -2 260 190 3751 156 41 12 chr2 53443645 53444332 -199812251 + MER39 LTR ERV1 1 707 0 2089 156 58 86 chr2 53445869 53446370 -199810213 + MER67D LTR ERV1 25 511 -3 338 383 43 31 chr2 53447739 53447995 -199808588 + MIR SINE MIR 4 262 0 2404 67 0 16 chr2 53450767 53451083 -199805500 + AluY SINE Alu 1 311 0 182 343 74 9 chr2 53451729 53451837 -199804746 + MIR SINE MIR 136 250 -12 859 186 0 49 chr2 53452010 53452193 -199804390 + AluJo SINE Alu 1 174 -138 32 0 0 0 chr2 53452984 53453016 -199803567 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr2 53453596 53453617 -199802966 + AT_rich Low_complexity Low_complexity 1 21 0 2115 128 0 0 chr2 53453653 53453951 -199802632 + AluSq SINE Alu 1 298 -15 268 299 90 66 chr2 53454955 53455166 -199801417 + MIR SINE MIR 12 227 -35 229 274 128 68 chr2 53455966 53456083 -199800500 - L2 LINE L2 -12 3260 3137 261 304 25 0 chr2 53456086 53456165 -199800418 + GA-rich Low_complexity Low_complexity 3 83 0 431 270 129 47 chr2 53456739 53456972 -199799611 + MIR SINE MIR 1 252 -10 501 374 72 18 chr2 53457055 53457521 -199799062 + L2 LINE L2 2702 3193 -120 432 0 0 0 chr2 53459665 53459713 -199796870 + (TG)n Simple_repeat Simple_repeat 1 48 0 1973 112 4 0 chr2 53459713 53459989 -199796594 - AluSg SINE Alu -33 277 1 30 27 0 0 chr2 53460023 53460060 -199796523 + AT_rich Low_complexity Low_complexity 1 37 0 285 303 0 0 chr2 53460307 53460383 -199796200 + MER115 DNA AcHobo 1 65 -628 1291 345 56 10 chr2 53461102 53461601 -199794982 - MLT1G1 LTR MaLR -2 593 72 2206 107 0 0 chr2 53462015 53462306 -199794277 + AluSq SINE Alu 1 291 -22 294 29 0 0 chr2 53462309 53462344 -199794239 + (TAAAA)n Simple_repeat Simple_repeat 2 36 0 189 349 18 28 chr2 53462349 53462458 -199794125 - MIR SINE MIR -81 127 20 23 33 0 0 chr2 53462551 53462581 -199794002 + AT_rich Low_complexity Low_complexity 1 30 0 217 321 97 30 chr2 53463232 53463366 -199793217 - MIR SINE MIR 0 262 120 25 0 0 0 chr2 53463997 53464022 -199792561 + AT_rich Low_complexity Low_complexity 1 25 0 281 139 89 10 chr2 53464149 53464250 -199792333 + (TA)n Simple_repeat Simple_repeat 1 109 0 245 313 0 0 chr2 53464555 53464654 -199791929 - L1MC/D LINE L1 -1976 5832 5734 228 349 27 55 chr2 53464901 53465047 -199791536 + L3 LINE CR1 1215 1356 -221 441 316 26 16 chr2 53465107 53465297 -199791286 + L1ME1 LINE L1 40 231 -6165 * 1928 252 60 19 chr2 53465289 53466408 -199790175 + L1ME1 LINE L1 1846 2976 -3239 3151 259 55 18 chr2 53466409 53466620 -199789963 + L1ME1 LINE L1 3585 3787 -2428 1455 204 21 3 chr2 53466620 53466909 -199789674 + AluJo SINE Alu 4 297 -15 3151 259 55 18 chr2 53466909 53466992 -199789591 + L1ME1 LINE L1 3787 3865 -2350 2415 58 0 43 chr2 53466992 53467317 -199789266 - AluY SINE Alu 0 311 1 3151 259 55 18 chr2 53467317 53467390 -199789193 + L1ME1 LINE L1 3865 3934 -2281 288 53 0 0 chr2 53467390 53467428 -199789155 + (CA)n Simple_repeat Simple_repeat 2 39 0 3151 259 55 18 chr2 53467428 53468543 -199788040 + L1ME1 LINE L1 3934 5181 -1034 1963 268 66 29 chr2 53468644 53469438 -199787145 + L1ME1 LINE L1 5340 6171 -64 2156 99 3 0 chr2 53469438 53469761 -199786822 + AluSx SINE Alu 1 324 0 1963 268 66 29 chr2 53469761 53469824 -199786759 + L1ME1 LINE L1 6171 6230 -5 224 154 19 0 chr2 53470202 53470254 -199786329 + A-rich Low_complexity Low_complexity 3 55 0 243 356 66 60 chr2 53471813 53472299 -199784284 - L2 LINE L2 -8 3305 2817 405 90 0 0 chr2 53472980 53473047 -199783536 + (TC)n Simple_repeat Simple_repeat 2 68 0 703 158 39 16 chr2 53473218 53473345 -199783238 + THE1B LTR MaLR 1 130 -234 269 82 20 0 chr2 53473345 53473394 -199783189 + (TA)n Simple_repeat Simple_repeat 1 50 0 210 139 0 0 chr2 53473395 53473431 -199783152 + (TG)n Simple_repeat Simple_repeat 1 36 0 2271 66 0 3 chr2 53474156 53474442 -199782141 + AluY SINE Alu 17 301 -10 627 311 44 24 chr2 53474566 53474814 -199781769 - MIR SINE MIR -4 258 6 2439 111 34 0 chr2 53474987 53475339 -199781244 + THE1B LTR MaLR 1 364 0 181 333 133 0 chr2 53475535 53475655 -199780928 - L2 LINE L2 -1 3312 3177 657 274 47 44 chr2 53475942 53476304 -199780279 - L1ME LINE L1 -4822 1562 1200 217 161 97 16 chr2 53476322 53476384 -199780199 + (TATAA)n Simple_repeat Simple_repeat 2 68 0 1023 272 83 42 chr2 53476406 53476998 -199779585 - L1ME LINE L1 -5069 1303 688 530 296 47 24 chr2 53477021 53477234 -199779349 - L1ME LINE L1 -5748 624 407 22 35 0 0 chr2 53477570 53477599 -199778984 + AT_rich Low_complexity Low_complexity 1 29 0 206 290 84 30 chr2 53477937 53478068 -199778515 - MIR SINE MIR -12 250 113 27713 64 2 1 chr2 53478696 53482340 -199774243 - L1PA5 LINE L1 -1282 4864 1217 7111 49 8 1 chr2 53482346 53483640 -199772943 + L1PA5 LINE L1 4851 6153 -1 247 143 18 18 chr2 53485292 53485348 -199771235 + (CATATA)n Simple_repeat Simple_repeat 2 57 0 200 239 11 22 chr2 53485532 53485624 -199770959 + (TA)n Simple_repeat Simple_repeat 1 91 0 1647 238 41 2 chr2 53486061 53486523 -199770060 - Charlie4a DNA MER1_type -4 504 25 259 314 91 0 chr2 53486604 53486725 -199769858 - MIR SINE MIR -14 248 117 195 314 0 20 chr2 53486890 53486941 -199769642 - MIR SINE MIR -139 69 20 180 0 0 0 chr2 53486941 53486961 -199769622 + (A)n Simple_repeat Simple_repeat 1 20 0 183 328 16 0 chr2 53487575 53487636 -199768947 - L2 LINE L2 -219 3053 2992 210 91 0 0 chr2 53489368 53489401 -199767182 + (TA)n Simple_repeat Simple_repeat 2 34 0 28 61 0 0 chr2 53490820 53490869 -199765714 + AT_rich Low_complexity Low_complexity 1 49 0 186 133 0 0 chr2 53491017 53491047 -199765536 + (TA)n Simple_repeat Simple_repeat 1 30 0 2140 125 0 0 chr2 53491048 53491343 -199765240 - AluSc SINE Alu -14 295 1 425 33 0 17 chr2 53491572 53491632 -199764951 + (CA)n Simple_repeat Simple_repeat 2 60 0 21 0 0 0 chr2 53491798 53491819 -199764764 + AT_rich Low_complexity Low_complexity 1 21 0 2193 120 0 0 chr2 53492519 53492828 -199763755 + AluSg SINE Alu 1 309 -1 1035 132 71 185 chr2 53493054 53493394 -199763189 + AluJo SINE Alu 2 302 0 64 57 0 0 chr2 53493886 53493992 -199762591 + AT_rich Low_complexity Low_complexity 1 106 0 430 370 78 13 chr2 53494207 53494580 -199762003 + L3 LINE CR1 1171 1567 -10 2375 123 13 13 chr2 53494592 53494965 -199761618 + THE1C LTR MaLR 1 373 -2 8752 131 34 65 chr2 53494967 53496596 -199759987 + THE1C-int LTR MaLR 1 1580 0 2368 127 13 19 chr2 53496596 53496973 -199759610 + THE1C LTR MaLR 1 375 0 22 80 0 0 chr2 53499190 53499240 -199757343 + AT_rich Low_complexity Low_complexity 1 50 0 308 292 130 22 chr2 53499601 53499786 -199756797 - L1ME4a LINE L1 -157 5964 5760 18721 30 3 0 chr2 53499921 53502936 -199753647 - L1PA3 LINE L1 -3 6152 3130 1640 180 3 42 chr2 53503352 53503663 -199752920 - AluJo SINE Alu -11 301 3 462 330 101 40 chr2 53503787 53504346 -199752237 - L2 LINE L2 -94 3219 2638 1766 212 9 17 chr2 53504358 53504825 -199751758 - MLT2B1 LTR ERVL -8 512 1 7474 144 46 11 chr2 53504825 53506104 -199750479 - ERVL-B1 LTR ERVL -7 5757 4434 698 299 88 8 chr2 53506104 53506355 -199750228 - L2 LINE L2 -668 2646 2376 4775 119 30 57 chr2 53506894 53507796 -199748787 - L1MA2 LINE L1 -4 7719 6842 1036 158 43 0 chr2 53507796 53507960 -199748623 - AluSg/x SINE Alu -17 295 125 496 208 0 0 chr2 53507962 53508082 -199748501 - L1MA2 LINE L1 -1409 6156 6037 * 11318 176 51 10 chr2 53508075 53510098 -199746485 - L1MA2 LINE L1 -5315 2250 144 29754 128 19 35 chr2 53510099 53516352 -199740231 + L1PA7 LINE L1 1 6151 -3 5402 123 16 11 chr2 53516383 53517237 -199739346 + L1PB1 LINE L1 4938 5796 -355 419 0 20 0 chr2 53517237 53517288 -199739295 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 5402 123 16 11 chr2 53517288 53517643 -199738940 + L1PB1 LINE L1 5796 6148 -3 646 178 30 22 chr2 53517669 53517804 -199738779 - L1MA2 LINE L1 -7407 158 23 263 288 12 0 chr2 53517867 53517947 -199738636 + CT-rich Low_complexity Low_complexity 3 83 0 302 325 84 70 chr2 53518119 53518131 -199738452 - L1M4 LINE L1 -1951 4195 4185 28 29 0 0 chr2 53518131 53518166 -199738417 + AT_rich Low_complexity Low_complexity 1 35 0 302 325 84 70 chr2 53518166 53518608 -199737975 - L1M4 LINE L1 -1961 4185 3700 33 56 0 0 chr2 53518940 53518994 -199737589 + AT_rich Low_complexity Low_complexity 1 54 0 28 61 0 0 chr2 53519256 53519305 -199737278 + AT_rich Low_complexity Low_complexity 1 49 0 38 81 0 0 chr2 53519451 53519538 -199737045 + AT_rich Low_complexity Low_complexity 1 87 0 24 53 0 0 chr2 53519626 53519664 -199736919 + AT_rich Low_complexity Low_complexity 1 38 0 26 64 0 0 chr2 53519750 53519797 -199736786 + AT_rich Low_complexity Low_complexity 1 47 0 306 354 7 0 chr2 53519942 53520086 -199736497 - HAL1 LINE L1 -835 1672 1528 1686 215 109 41 chr2 53520628 53520887 -199735696 + L1MDb LINE L1 845 1085 -5321 2181 95 27 0 chr2 53520887 53521181 -199735402 + AluSc SINE Alu 1 302 -7 1686 215 109 41 chr2 53521181 53521747 -199734836 + L1MDb LINE L1 1085 1742 -4664 2098 141 36 30 chr2 53521862 53522224 -199734359 - THE1B LTR MaLR 0 364 1 2611 113 2 31 chr2 53522229 53522643 -199733940 - THE1B-int LTR MaLR -6 1574 1173 * 5703 213 31 24 chr2 53522642 53524265 -199732318 - L1MC1 LINE L1 -222 6391 4740 2006 131 0 6 chr2 53524265 53524578 -199732005 - AluY SINE Alu 0 311 1 5703 213 31 24 chr2 53524578 53525433 -199731150 - L1MC1 LINE L1 -1873 4740 3892 849 159 8 0 chr2 53525455 53525587 -199730996 + Tigger3(Golem) DNA MER2_type 2906 3038 0 6905 170 97 44 chr2 53525587 53527383 -199729200 - L1MC1 LINE L1 -4015 2411 520 374 379 54 26 chr2 53527458 53527849 -199728734 - MER89-int LTR ERV1 -3273 3528 3127 619 302 41 16 chr2 53528193 53528435 -199728148 + L1MEc LINE L1 367 614 -6107 1107 212 83 39 chr2 53528947 53529334 -199727249 - LTR37A LTR ERV1 -10 416 13 247 286 0 24 chr2 53529957 53530041 -199726542 + (CATATA)n Simple_repeat Simple_repeat 3 84 0 288 266 165 9 chr2 53531535 53531644 -199724939 + MIR SINE MIR 32 157 -105 196 320 64 64 chr2 53531692 53531817 -199724766 - MIR SINE MIR -108 154 30 319 345 58 29 chr2 53531817 53531988 -199724595 + MIR SINE MIR 29 204 -58 234 139 23 47 chr2 53531990 53532076 -199724507 + (TA)n Simple_repeat Simple_repeat 2 85 0 43 20 0 0 chr2 53532173 53532223 -199724360 + AT_rich Low_complexity Low_complexity 1 50 0 725 294 71 71 chr2 53533114 53533536 -199723047 + MLT1H LTR MaLR 1 422 -127 243 88 0 0 chr2 53533578 53533612 -199722971 + (TC)n Simple_repeat Simple_repeat 1 34 0 342 0 0 0 chr2 53533612 53533650 -199722933 + (TAGA)n Simple_repeat Simple_repeat 1 38 0 284 102 0 17 chr2 53533661 53533720 -199722863 + (TA)n Simple_repeat Simple_repeat 1 58 0 216 226 0 32 chr2 53534324 53534386 -199722197 + GA-rich Low_complexity Low_complexity 4 63 0 345 289 56 53 chr2 53534545 53534867 -199721716 + L1MEc LINE L1 1306 1628 -4902 190 190 17 17 chr2 53534909 53534967 -199721616 + GA-rich Low_complexity Low_complexity 2 59 0 239 252 27 0 chr2 53535014 53535125 -199721458 + A-rich Low_complexity Low_complexity 2 115 0 269 266 119 11 chr2 53535193 53535370 -199721213 + L1MEc LINE L1 1847 2042 -4498 3394 139 10 73 chr2 53535447 53536144 -199720439 + MER39B LTR ERV1 1 653 0 22 0 0 0 chr2 53536269 53536291 -199720292 + AT_rich Low_complexity Low_complexity 1 22 0 461 287 77 65 chr2 53536483 53536914 -199719669 + L1MEc LINE L1 2535 2976 -3564 9486 29 0 0 chr2 53536914 53538818 -199717765 + L1PA3 LINE L1 4243 6150 -5 461 287 77 65 chr2 53538818 53538981 -199717602 + L1MEc LINE L1 2976 3136 -3404 217 314 24 57 chr2 53539321 53539445 -199717138 + MIR SINE MIR 34 153 -109 1013 218 13 75 chr2 53539523 53539612 -199716971 - MER8 DNA MER2_type -10 229 136 1212 231 7 20 chr2 53539612 53539910 -199716673 + AluJo SINE Alu 1 294 -8 1013 218 13 75 chr2 53539910 53540059 -199716524 - MER8 DNA MER2_type -103 136 6 4756 184 13 33 chr2 53542154 53543202 -199713381 + L1MEc LINE L1 3735 4761 -1779 639 296 0 0 chr2 53543202 53543361 -199713222 - MER52A LTR ERV1 0 1755 1597 229 335 76 19 chr2 53543396 53543554 -199713029 - MER52A LTR ERV1 -298 1457 1291 920 182 65 113 chr2 53543641 53544093 -199712490 - MER52A LTR ERV1 -523 1232 663 4012 157 17 3 chr2 53544098 53545934 -199710649 + L1MA2 LINE L1 4758 6698 0 815 228 62 67 chr2 53545937 53545995 -199710588 - MER69 DNA AcHobo -63 2463 2406 2077 121 3 13 chr2 53545995 53546293 -199710290 - AluSq SINE Alu -18 295 1 815 228 62 67 chr2 53546293 53546682 -199709901 - MER69 DNA AcHobo -120 2406 2018 563 244 15 7 chr2 53546799 53546934 -199709649 + MLT1C LTR MaLR 35 170 -297 265 98 0 0 chr2 53546934 53546975 -199709608 + L1PA4 LINE L1 5865 5905 -250 3216 52 43 2 chr2 53546975 53547397 -199709186 + L1PA5 LINE L1 5714 6152 -2 1012 214 23 68 chr2 53547399 53547707 -199708876 + MLT1C LTR MaLR 174 467 0 1558 241 141 30 chr2 53547736 53548239 -199708344 + MLT1F1 LTR MaLR 1 559 -8 491 320 85 0 chr2 53548249 53548449 -199708134 - MER69 DNA AcHobo -569 657 441 641 236 19 99 chr2 53548588 53548800 -199707783 - MER69 DNA AcHobo -2330 196 2 1071 290 80 26 chr2 53549354 53549806 -199706777 + L1MCa LINE L1 141 616 -5948 2188 124 48 25 chr2 53549895 53550251 -199706332 + THE1B LTR MaLR 1 364 0 5137 121 9 1 chr2 53550251 53551013 -199705570 + THE1B-int LTR MaLR 1 768 -812 370 143 29 0 chr2 53551017 53551087 -199705496 + THE1B-int LTR MaLR 1509 1580 0 2051 118 53 28 chr2 53551087 53551442 -199705141 + THE1B LTR MaLR 1 364 0 2323 238 122 32 chr2 53551447 53553337 -199703246 + L1MCa LINE L1 491 2711 -3853 1920 129 7 7 chr2 53553337 53553632 -199702951 + AluSx SINE Alu 1 295 -17 2323 238 122 32 chr2 53553632 53553825 -199702758 + L1MCa LINE L1 2711 2885 -3679 359 80 0 0 chr2 53553874 53553924 -199702659 + MADE1 DNA Mariner 31 80 0 601 239 44 13 chr2 53553924 53554150 -199702433 + L1MCa LINE L1 3231 3463 -3101 * 4172 248 34 10 chr2 53554147 53555376 -199701207 + L1MCa LINE L1 4053 5311 -1253 1451 105 141 10 chr2 53555381 53555733 -199700850 + LTR12 LTR ERV1 31 2002 -436 306 302 9 0 chr2 53555733 53555849 -199700734 + LTR30 LTR ERV1 526 642 -80 929 176 26 82 chr2 53555850 53556083 -199700500 + LTR12 LTR ERV1 480 699 -15 3432 186 29 39 chr2 53556085 53557026 -199699557 + L1MC2 LINE L1 5282 6335 -9 23 20 7 0 chr2 53557031 53557098 -199699485 + AT_rich Low_complexity Low_complexity 1 30 0 257 256 0 0 chr2 53557341 53557419 -199699164 - L1MC4 LINE L1 -1351 6691 6614 313 189 91 15 chr2 53557440 53557572 -199699011 + (TTATA)n Simple_repeat Simple_repeat 3 144 0 225 145 0 97 chr2 53557575 53557637 -199698946 - LTR66 LTR ERVL -156 454 399 359 57 38 0 chr2 53557644 53557697 -199698886 + (CATATA)n Simple_repeat Simple_repeat 6 60 0 247 384 47 29 chr2 53559353 53559525 -199697058 + L2 LINE L2 2700 2874 -440 272 339 16 32 chr2 53559526 53559650 -199696933 - L2 LINE L2 0 3313 3192 261 0 0 0 chr2 53560131 53560160 -199696423 + (TA)n Simple_repeat Simple_repeat 1 29 0 651 66 0 0 chr2 53560181 53560272 -199696311 - L1PA8 LINE L1 0 6172 6082 508 210 0 0 chr2 53560368 53560468 -199696115 + FLAM_C SINE Alu 12 111 -32 1553 160 60 49 chr2 53560471 53560839 -199695744 + THE1C LTR MaLR 1 372 -3 381 22 0 0 chr2 53561514 53561560 -199695023 + (CA)n Simple_repeat Simple_repeat 2 47 0 298 171 97 44 chr2 53563195 53563320 -199693263 + L1ME3A LINE L1 5676 5801 -361 343 180 108 18 chr2 53563358 53563469 -199693114 + L1ME3A LINE L1 5984 6104 -66 555 195 8 0 chr2 53564679 53564802 -199691781 - L1MB7 LINE L1 -11 6173 6050 343 231 51 0 chr2 53564813 53564891 -199691692 + MER31A-int LTR ERV1 200 281 -4655 6458 212 74 76 chr2 53564958 53565200 -199691383 + MER31A-int LTR ERV1 179 420 -4516 2434 56 0 3 chr2 53565200 53565503 -199691080 - AluY SINE Alu -9 302 1 6458 212 74 76 chr2 53565503 53567653 -199688930 + MER31A-int LTR ERV1 420 2567 -2369 2664 218 101 73 chr2 53567653 53568656 -199687927 + MER31A-int LTR ERV1 3764 4794 -142 1919 128 81 26 chr2 53568656 53569001 -199687582 + THE1B LTR MaLR 1 364 0 10930 114 8 11 chr2 53569002 53570575 -199686008 + THE1B-int LTR MaLR 2 1568 -12 1847 158 66 17 chr2 53570602 53570949 -199685634 + THE1B LTR MaLR 1 364 0 408 125 194 0 chr2 53570950 53571022 -199685561 + MER31A-int LTR ERV1 4791 4876 -60 1887 197 9 57 chr2 53571048 53571505 -199685078 + MER31A LTR ERV1 1 435 -50 219 36 0 0 chr2 53571789 53571817 -199684766 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 21 0 0 0 chr2 53572685 53572706 -199683877 + AT_rich Low_complexity Low_complexity 1 21 0 1318 177 95 13 chr2 53573606 53573922 -199682661 - L1MB2 LINE L1 0 6171 5830 21 36 0 0 chr2 53573963 53573991 -199682592 + AT_rich Low_complexity Low_complexity 1 28 0 602 332 81 49 chr2 53574203 53574636 -199681947 - L2 LINE L2 -556 2758 2307 1979 113 0 77 chr2 53574636 53574963 -199681620 + AluSx SINE Alu 1 302 -10 602 332 81 49 chr2 53574963 53574999 -199681584 - L2 LINE L2 -1007 2307 2274 532 237 64 35 chr2 53575101 53575274 -199681309 - MER58A DNA MER1_type 0 224 47 583 237 73 28 chr2 53575374 53575505 -199681078 + MER5A DNA MER1_type 4 146 -43 477 0 0 0 chr2 53575505 53575558 -199681025 + (CA)n Simple_repeat Simple_repeat 2 54 0 583 237 73 28 chr2 53575558 53575603 -199680980 + MER5A DNA MER1_type 146 188 -1 181 357 77 44 chr2 53575613 53575795 -199680788 + MER5A DNA MER1_type 2 189 0 28 0 0 0 chr2 53576588 53576616 -199679967 + AT_rich Low_complexity Low_complexity 1 28 0 1803 166 13 3 chr2 53576926 53577227 -199679356 + AluSq SINE Alu 1 304 -9 2023 148 0 7 chr2 53577556 53577860 -199678723 - AluSx SINE Alu -10 302 1 448 237 52 0 chr2 53578155 53578252 -199678331 - MER5A DNA MER1_type -84 105 4 1769 192 17 41 chr2 53578403 53578885 -199677698 + MER89 LTR ERV1 27 559 0 327 280 75 9 chr2 53578885 53578992 -199677591 + MIR SINE MIR 64 177 -85 413 324 27 14 chr2 53579741 53579889 -199676694 - MIR SINE MIR -111 151 2 21 71 0 0 chr2 53581632 53581674 -199674909 + AT_rich Low_complexity Low_complexity 1 42 0 436 349 116 31 chr2 53581715 53582212 -199674371 - L2 LINE L2 -163 3150 2613 450 326 45 9 chr2 53582213 53582437 -199674146 - L2 LINE L2 -1882 1432 1201 223 322 171 26 chr2 53583626 53583778 -199672805 + MIR SINE MIR 23 196 -66 21 36 0 0 chr2 53583808 53583836 -199672747 + AT_rich Low_complexity Low_complexity 1 28 0 707 341 114 25 chr2 53585525 53585965 -199670618 + L3 LINE CR1 1086 1564 -13 24 77 0 0 chr2 53586297 53586349 -199670234 + AT_rich Low_complexity Low_complexity 1 52 0 2477 54 0 3 chr2 53586876 53587174 -199669409 - AluY SINE Alu -14 297 1 257 354 20 20 chr2 53588292 53588439 -199668144 + L3 LINE CR1 1050 1196 -381 184 388 119 0 chr2 53588526 53588660 -199667923 + L3 LINE CR1 1374 1523 -54 258 307 63 24 chr2 53589001 53589128 -199667455 - L2 LINE L2 -5 3308 3177 223 391 0 39 chr2 53589227 53589406 -199667177 - L2 LINE L2 -195 3077 2906 962 321 34 11 chr2 53590666 53591018 -199665565 - MER69 DNA AcHobo -705 521 162 609 203 114 38 chr2 53591177 53591335 -199665248 - AluSg/x SINE Alu -15 295 126 405 245 19 0 chr2 53591347 53591502 -199665081 + (TA)n Simple_repeat Simple_repeat 1 158 0 507 230 0 0 chr2 53591502 53591589 -199664994 - AluJb SINE Alu -190 122 36 395 305 25 25 chr2 53591859 53591900 -199664683 + L2 LINE L2 3116 3156 -157 1731 164 30 7 chr2 53591900 53592199 -199664384 - AluSx SINE Alu -4 308 3 395 305 25 25 chr2 53592199 53592354 -199664229 + L2 LINE L2 3155 3312 -1 506 196 11 0 chr2 53592460 53592552 -199664031 - Tigger7 DNA MER2_type 0 2487 2395 * 2857 174 35 10 chr2 53592550 53593013 -199663570 - Tigger7 DNA MER2_type -212 521 42 1680 127 8 4 chr2 53593013 53593280 -199663303 + L1PB1 LINE L1 5876 6143 -8 2857 174 35 10 chr2 53593280 53593323 -199663260 - Tigger7 DNA MER2_type -691 42 2 1339 262 46 65 chr2 53594328 53594957 -199661626 - L1ME1 LINE L1 -20 6941 6325 529 251 66 6 chr2 53594951 53595118 -199661465 - L1ME1 LINE L1 -2493 4448 4272 * 210 284 25 0 chr2 53595127 53595208 -199661375 + (TA)n Simple_repeat Simple_repeat 2 84 0 1151 262 70 20 chr2 53595218 53595802 -199660781 - L1ME1 LINE L1 -2685 4256 3644 1448 258 71 4 chr2 53595804 53596308 -199660275 - L1ME1 LINE L1 -3333 3608 3071 1695 203 134 28 chr2 53596318 53596849 -199659734 - L1MD3 LINE L1 -5 7990 7404 313 130 0 0 chr2 53596854 53596900 -199659683 - MLT1F1 LTR MaLR -447 120 75 422 209 99 22 chr2 53597033 53597215 -199659368 - L1MD3 LINE L1 -933 7062 6867 401 248 29 7 chr2 53597208 53597345 -199659238 - L1ME1 LINE L1 -3861 3080 2941 * 323 261 39 39 chr2 53597356 53597486 -199659097 - L1ME1 LINE L1 -4185 2937 2808 948 258 110 15 chr2 53597558 53598106 -199658477 - L1ME1 LINE L1 -4899 1524 1117 291 247 78 0 chr2 53598617 53598694 -199657889 + L2 LINE L2 1920 2002 -1312 923 279 13 13 chr2 53598764 53598997 -199657586 + L1M3c LINE L1 1 233 -5908 4454 185 59 23 chr2 53598998 53599317 -199657266 + L1MA9 LINE L1 4954 5260 -1052 2053 146 0 0 chr2 53599317 53599611 -199656972 + AluSx SINE Alu 1 294 -18 4454 185 59 23 chr2 53599611 53600612 -199655971 + L1MA9 LINE L1 5260 6312 0 2039 95 35 3 chr2 53600631 53600916 -199655667 - AluSg SINE Alu -16 294 1 1122 320 142 56 chr2 53600917 53601181 -199655402 + L2 LINE L2 2099 2339 -974 2359 138 8 11 chr2 53601181 53601557 -199655026 + THE1C LTR MaLR 1 375 0 1122 320 142 56 chr2 53601557 53602410 -199654173 + L2 LINE L2 2339 3313 0 22 0 0 0 chr2 53603939 53603961 -199652622 + AT_rich Low_complexity Low_complexity 1 22 0 2138 192 22 26 chr2 53604135 53604594 -199651989 + MSTB2 LTR MaLR 1 457 0 422 311 37 75 chr2 53604633 53604955 -199651628 + L2 LINE L2 1595 1904 -1410 657 330 93 23 chr2 53604975 53605448 -199651135 + L2 LINE L2 2472 2977 -337 1173 210 12 135 chr2 53606280 53606694 -199649889 + MLT1A1 LTR MaLR 1 363 -2 2322 249 52 85 chr2 53607388 53607403 -199649180 - MER21B LTR ERV1 -33 830 816 2060 131 16 3 chr2 53607403 53607708 -199648875 - AluSx SINE Alu -3 309 1 2322 249 52 85 chr2 53607708 53608550 -199648033 - MER21B LTR ERV1 -47 816 1 371 350 29 0 chr2 53608961 53609101 -199647482 - MIR SINE MIR -71 191 48 332 329 86 42 chr2 53611126 53611437 -199645146 - L2 LINE L2 -219 3053 2734 250 270 34 20 chr2 53611473 53611621 -199644962 + (TA)n Simple_repeat Simple_repeat 2 151 0 219 350 73 23 chr2 53611933 53612110 -199644473 - L2 LINE L2 -942 2372 2187 338 265 0 0 chr2 53612687 53612755 -199643828 + MER58 DNA MER1_type 19 86 -2334 221 233 0 0 chr2 53612771 53612831 -199643752 + T-rich Low_complexity Low_complexity 6 65 0 229 204 28 111 chr2 53612957 53613065 -199643518 + L1MC4 LINE L1 6604 6702 -1340 437 271 6 0 chr2 53613100 53613277 -199643306 + (TA)n Simple_repeat Simple_repeat 2 179 0 613 297 39 30 chr2 53613336 53613568 -199643015 + MLT1J2 LTR MaLR 1 234 -216 279 291 12 0 chr2 53613673 53613759 -199642824 + L1ME LINE L1 5465 5551 -611 504 146 0 0 chr2 53613764 53613853 -199642730 + (TA)n Simple_repeat Simple_repeat 1 89 0 3586 138 47 0 chr2 53614338 53614916 -199641667 + MER39B LTR ERV1 1 605 -48 15756 62 22 4 chr2 53614926 53617827 -199638756 - L1PA5 LINE L1 0 6154 3208 15502 118 18 7 chr2 53617828 53620150 -199636433 - L1PA5 LINE L1 -3789 2357 11 302 140 193 0 chr2 53620156 53620213 -199636370 + LTR49 LTR ERV1 528 595 0 190 116 47 0 chr2 53620247 53620290 -199636293 + (TA)n Simple_repeat Simple_repeat 2 46 0 4347 107 34 6 chr2 53620378 53621053 -199635530 - L1PA13 LINE L1 -5 6158 5465 25 31 0 0 chr2 53621123 53621155 -199635428 + AT_rich Low_complexity Low_complexity 1 32 0 2231 155 22 0 chr2 53622194 53622561 -199634022 - THE1C LTR MaLR 0 375 1 2111 112 19 49 chr2 53622961 53623328 -199633255 - L1PB1 LINE L1 -1 6150 5795 423 219 0 0 chr2 53623328 53623424 -199633159 + (TG)n Simple_repeat Simple_repeat 2 97 0 245 133 0 0 chr2 53623437 53623482 -199633101 - LTR66 LTR ERVL -172 438 394 245 133 0 0 chr2 53623446 53623491 -199633092 + LTR66 LTR ERVL 394 438 -172 3446 156 39 3 chr2 53623509 53624370 -199632213 - L1PB1 LINE L1 -360 5791 4899 6268 120 46 3 chr2 53624377 53625576 -199631007 + L1PBa LINE L1 938 2366 -4497 1312 244 41 3 chr2 53625566 53625956 -199630627 + L1 LINE L1 3710 4114 -2748 * 24 32 0 0 chr2 53626102 53626133 -199630450 + AT_rich Low_complexity Low_complexity 1 31 0 465 19 0 0 chr2 53626863 53626917 -199629666 + (TA)n Simple_repeat Simple_repeat 1 54 0 184 268 0 0 chr2 53627094 53627135 -199629448 - MIR SINE MIR -57 151 111 2173 129 0 0 chr2 53627976 53628278 -199628305 + AluSg SINE Alu 1 302 -8 428 301 258 0 chr2 53628658 53628867 -199627716 - L3 LINE CR1 -69 1508 1246 677 222 47 29 chr2 53630493 53630664 -199625919 - MIR SINE MIR -4 258 85 182 301 55 0 chr2 53631939 53632012 -199624571 - MIR3 SINE MIR -5 203 127 2177 267 88 40 chr2 53632482 53632881 -199623702 + L1M4b LINE L1 14 463 -6396 2236 82 9 38 chr2 53632881 53633200 -199623383 - AluY SINE Alu -1 310 1 2177 267 88 40 chr2 53633200 53633501 -199623082 + L1M4b LINE L1 463 748 -6111 336 257 18 12 chr2 53634881 53635052 -199621531 + (TA)n Simple_repeat Simple_repeat 1 172 0 261 104 61 17 chr2 53635061 53635176 -199621407 + (TATAA)n Simple_repeat Simple_repeat 5 124 0 1120 288 70 19 chr2 53635499 53635929 -199620654 + LTR40c LTR ERVL 1 452 -13 346 330 0 17 chr2 53636104 53636219 -199620364 - LTR16A LTR ERVL -221 229 117 295 362 74 13 chr2 53636629 53636858 -199619725 + MIR SINE MIR 20 262 0 225 279 49 0 chr2 53637003 53637064 -199619519 + L2 LINE L2 3209 3272 0 340 336 71 20 chr2 53637692 53637945 -199618638 - LTR16C LTR ERVL -1 490 225 23 33 0 0 chr2 53638473 53638503 -199618080 + AT_rich Low_complexity Low_complexity 1 30 0 583 240 66 16 chr2 53638842 53639025 -199617558 - MLT1H LTR MaLR -319 230 39 1096 265 56 48 chr2 53639059 53639471 -199617112 - MLT1C LTR MaLR 0 467 53 284 298 50 25 chr2 53640225 53640346 -199616237 + MER5C DNA MER1_type 1 124 -200 194 261 170 42 chr2 53641034 53641199 -199615384 + MER5C DNA MER1_type 136 321 -3 2097 112 3 3 chr2 53641321 53641624 -199614959 + AluSc SINE Alu 1 303 -6 748 247 112 20 chr2 53642178 53642482 -199614101 + MLT2C1 LTR ERVL 1 332 -65 699 112 0 0 chr2 53642482 53642589 -199613994 + (TG)n Simple_repeat Simple_repeat 2 108 0 390 328 76 18 chr2 53643203 53643374 -199613209 - MIR SINE MIR -73 189 9 732 244 78 10 chr2 53643522 53643727 -199612856 - MLT1E3 LTR MaLR -8 616 398 359 270 11 0 chr2 53643752 53643841 -199612742 - MLT1E3 LTR MaLR -334 292 203 2031 137 10 3 chr2 53643899 53644205 -199612378 - AluSg SINE Alu -2 308 1 1617 182 29 23 chr2 53644683 53645269 -199611314 - MER73 LTR ERVL 0 644 2 403 319 55 15 chr2 53645752 53646045 -199610538 - LTR16A LTR ERVL -19 431 51 1474 226 43 55 chr2 53646045 53646484 -199610099 - MLT1D LTR MaLR 0 505 72 684 270 53 5 chr2 53646673 53646942 -199609641 - L1ME1 LINE L1 -7 6240 5951 2986 264 62 34 chr2 53646949 53649054 -199607529 - L1ME1 LINE L1 -392 5861 3667 5948 91 11 9 chr2 53649231 53650092 -199606491 - L1PA14 LINE L1 -2 6159 5298 1030 199 0 0 chr2 53650086 53650267 -199606316 - L1P LINE L1 -1907 4239 4059 * 2257 277 84 34 chr2 53650270 53652209 -199604374 - L1ME1 LINE L1 -2587 3628 1614 2008 134 3 3 chr2 53652209 53652514 -199604069 - AluSg SINE Alu -5 305 1 2257 277 84 34 chr2 53652514 53652834 -199603749 - L1ME1 LINE L1 -4601 1614 1311 25 31 0 0 chr2 53652938 53652970 -199603613 + AT_rich Low_complexity Low_complexity 1 32 0 641 333 97 42 chr2 53653006 53653145 -199603438 - HERV16 LTR ERVL -2860 2136 2006 1495 203 3 23 chr2 53653145 53653451 -199603132 + AluJb SINE Alu 5 304 -8 641 333 97 42 chr2 53653451 53653743 -199602840 - HERV16 LTR ERVL -2990 2006 1681 8435 207 60 29 chr2 53653806 53654211 -199602372 - L1MC3 LINE L1 -227 7558 7167 400 107 40 13 chr2 53654211 53654286 -199602297 + L1PA8 LINE L1 6095 6171 -1 8435 207 60 29 chr2 53654286 53655918 -199600665 - L1MC3 LINE L1 -618 7167 5459 235 279 163 23 chr2 53657022 53657151 -199599432 - MIR SINE MIR -96 166 20 1775 170 3 0 chr2 53657173 53657467 -199599116 + AluJb SINE Alu 1 295 -17 651 304 29 21 chr2 53658337 53658580 -199598003 + LTR16B LTR ERVL 8 252 -212 6078 53 1 0 chr2 53658580 53659334 -199597249 - L1PA5 LINE L1 -8 6146 5392 * 6315 62 6 13 chr2 53659332 53660191 -199596392 + L1PA5 LINE L1 4539 5391 -755 314 289 44 58 chr2 53660192 53660417 -199596166 + LTR16B LTR ERVL 233 454 -10 347 308 14 57 chr2 53660423 53660634 -199595949 + L1MEc LINE L1 1615 1816 -4580 976 249 111 86 chr2 53660776 53661326 -199595257 + MLT1E1 LTR MaLR 75 638 -16 312 283 61 0 chr2 53661392 53661491 -199595092 + L1MEc LINE L1 2430 2534 -3681 27 62 0 0 chr2 53662252 53662300 -199594283 + AT_rich Low_complexity Low_complexity 1 48 0 1772 162 7 3 chr2 53662652 53662949 -199593634 + AluSx SINE Alu 1 298 -14 26 30 0 0 chr2 53663832 53663865 -199592718 + AT_rich Low_complexity Low_complexity 1 33 0 1054 162 6 11 chr2 53663866 53664045 -199592538 - AluSx SINE Alu -131 181 4 347 247 145 96 chr2 53664060 53664226 -199592357 - MIR SINE MIR -79 183 10 1567 266 21 54 chr2 53665024 53665583 -199591000 + MER90 LTR ERV1 74 614 0 21 0 0 0 chr2 53666106 53666127 -199590456 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr2 53667367 53667404 -199589179 + AT_rich Low_complexity Low_complexity 1 37 0 25 0 0 0 chr2 53667501 53667526 -199589057 + AT_rich Low_complexity Low_complexity 1 25 0 367 114 78 6 chr2 53667645 53667812 -199588771 + (TA)n Simple_repeat Simple_repeat 2 180 0 274 86 60 35 chr2 53667848 53667964 -199588619 + (TA)n Simple_repeat Simple_repeat 1 119 0 191 125 25 0 chr2 53668115 53668155 -199588428 + (TA)n Simple_repeat Simple_repeat 1 41 0 369 79 99 20 chr2 53668205 53668357 -199588226 + (TA)n Simple_repeat Simple_repeat 1 164 0 197 31 94 0 chr2 53668458 53668490 -199588093 + T-rich Low_complexity Low_complexity 4 38 0 6895 51 16 0 chr2 53668497 53669748 -199586835 - L1PA4 LINE L1 -11 6144 4884 206 186 0 23 chr2 53673138 53673181 -199583402 + (TTA)n Simple_repeat Simple_repeat 1 42 0 13364 47 3 1 chr2 53673975 53676409 -199580174 - L1PA4 LINE L1 -2 6153 3704 1971 148 0 0 chr2 53676578 53676869 -199579714 - AluSx SINE Alu -21 291 1 191 288 138 25 chr2 53677221 53677301 -199579282 + MIR3 SINE MIR 111 199 -9 287 250 10 39 chr2 53677937 53678041 -199578542 + (TA)n Simple_repeat Simple_repeat 2 102 0 956 172 22 0 chr2 53678457 53678637 -199577946 - L1PB4 LINE L1 -334 5822 5639 1294 203 20 36 chr2 53678637 53678741 -199577842 + L1PB4 LINE L1 5843 5947 -209 1470 177 191 11 chr2 53678741 53679102 -199577481 - MSTA LTR MaLR -2 426 1 1294 203 20 36 chr2 53679102 53679302 -199577281 + L1PB4 LINE L1 5947 6142 -14 508 228 60 98 chr2 53680206 53680454 -199576129 - L1ME1 LINE L1 -6 6160 5925 2323 87 0 3 chr2 53680454 53680765 -199575818 - AluY SINE Alu -1 310 1 508 228 60 98 chr2 53680765 53680832 -199575751 - L1ME1 LINE L1 -241 5925 5857 * 2182 163 107 19 chr2 53680831 53681484 -199575099 - L1M2 LINE L1 -490 5801 5089 * 2968 192 37 37 chr2 53681480 53682187 -199574396 + L1 LINE L1 3687 4393 -1753 1018 167 14 9 chr2 53682184 53682399 -199574184 - L1M2 LINE L1 -1569 4577 4362 * 1521 239 90 2 chr2 53682416 53682892 -199573691 + L1 LINE L1 2570 3087 -3059 1528 269 28 38 chr2 53683040 53683727 -199572856 + L1M4 LINE L1 2485 3164 -2982 1139 258 71 13 chr2 53683749 53684199 -199572384 - L1MEc LINE L1 -4258 2138 1663 46 45 0 0 chr2 53684199 53684266 -199572317 + AT_rich Low_complexity Low_complexity 1 67 0 5363 155 42 50 chr2 53684298 53686530 -199570053 - L1MA6 LINE L1 -4 6296 4083 1997 306 84 24 chr2 53686572 53687936 -199568647 - L1MEc LINE L1 -4921 1475 31 1933 212 54 2 chr2 53688319 53688724 -199567859 + MSTB1 LTR MaLR 1 426 -6 2046 114 3 0 chr2 53689874 53690164 -199566419 - AluSp SINE Alu -2 311 21 308 265 177 20 chr2 53690745 53690892 -199565691 + MLT1J2 LTR MaLR 276 445 -5 598 350 87 14 chr2 53690987 53691561 -199565022 - L1M4 LINE L1 -1135 5011 4396 423 297 127 65 chr2 53691687 53692192 -199564391 - HAL1 LINE L1 -898 1609 1074 442 276 154 36 chr2 53692828 53693049 -199563534 + MIR SINE MIR 3 249 -13 391 319 107 6 chr2 53693177 53693346 -199563237 - MIR SINE MIR -70 192 7 2095 196 41 10 chr2 53693935 53694348 -199562235 - MSTB LTR MaLR 0 426 1 336 24 0 0 chr2 53694826 53694867 -199561716 + (CA)n Simple_repeat Simple_repeat 2 42 0 27 0 0 0 chr2 53695435 53695462 -199561121 + AT_rich Low_complexity Low_complexity 1 27 0 709 185 109 138 chr2 53695794 53696134 -199560449 - MER2 DNA MER2_type -14 331 2 835 337 113 64 chr2 53697174 53697496 -199559087 - L1MC5 LINE L1 -35 7926 7621 2094 137 0 6 chr2 53697496 53697809 -199558774 - AluSx SINE Alu -1 311 1 835 337 113 64 chr2 53697809 53698124 -199558459 - L1MC5 LINE L1 -340 7621 7258 26 50 0 0 chr2 53698220 53698260 -199558323 + AT_rich Low_complexity Low_complexity 1 40 0 2086 134 0 0 chr2 53698400 53698698 -199557885 + AluSx SINE Alu 1 298 -14 414 258 139 36 chr2 53698712 53698906 -199557677 - MIR SINE MIR -48 214 1 182 283 141 92 chr2 53699182 53699465 -199557118 - L3 LINE CR1 -110 1467 1171 3582 138 50 86 chr2 53699494 53699674 -199556909 + LTR1 LTR ERV1 1 186 -599 2121 62 18 0 chr2 53699674 53699973 -199556610 + AluY SINE Alu 1 304 0 3582 138 50 86 chr2 53699973 53700603 -199555980 + LTR1 LTR ERV1 186 783 -2 185 360 81 0 chr2 53700967 53701053 -199555530 - L3 LINE CR1 -493 1084 992 2100 80 45 0 chr2 53702424 53702710 -199553873 - AluY SINE Alu -10 301 3 189 176 0 44 chr2 53703879 53703947 -199552636 + A-rich Low_complexity Low_complexity 4 68 0 214 365 24 0 chr2 53704002 53704087 -199552496 + MIR3 SINE MIR 83 169 -39 21 0 0 0 chr2 53704249 53704270 -199552313 + AT_rich Low_complexity Low_complexity 1 21 0 360 0 0 0 chr2 53705256 53705296 -199551287 + (CA)n Simple_repeat Simple_repeat 2 41 0 21 57 0 0 chr2 53705850 53705885 -199550698 + AT_rich Low_complexity Low_complexity 1 35 0 559 316 96 14 chr2 53706212 53706630 -199549953 - L1M4 LINE L1 -1056 5159 4708 225 282 76 46 chr2 53706922 53707053 -199549530 - MIR SINE MIR -57 205 71 255 61 0 0 chr2 53709454 53709487 -199547096 + (A)n Simple_repeat Simple_repeat 1 33 0 1963 80 0 27 chr2 53710991 53711254 -199545329 + AluY SINE Alu 1 256 -55 2187 34 45 8 chr2 53711254 53711519 -199545064 + AluY SINE Alu 26 301 -10 27 29 0 0 chr2 53713038 53713072 -199543511 + AT_rich Low_complexity Low_complexity 1 34 0 285 302 15 84 chr2 53715492 53715694 -199540889 - L2 LINE L2 -205 3108 2921 423 0 0 0 chr2 53715819 53715866 -199540717 + (TAGA)n Simple_repeat Simple_repeat 3 49 0 306 308 50 0 chr2 53717830 53717950 -199538633 + MIR SINE MIR 59 184 -78 5788 183 34 34 chr2 53718319 53720425 -199536158 - L1PA10 LINE L1 -14 6154 4059 2272 278 83 35 chr2 53720428 53722367 -199534216 - L1MEc LINE L1 -2587 3628 1614 2038 134 3 3 chr2 53722367 53722672 -199533911 - AluSg SINE Alu -5 305 1 2272 278 83 35 chr2 53722672 53722992 -199533591 - L1MEc LINE L1 -4601 1614 1311 25 31 0 0 chr2 53723096 53723128 -199533455 + AT_rich Low_complexity Low_complexity 1 32 0 600 339 90 39 chr2 53723164 53723303 -199533280 - HERV16 LTR ERVL -2860 2136 2005 1488 193 10 29 chr2 53723303 53723609 -199532974 + AluJb SINE Alu 5 304 -8 600 339 90 39 chr2 53723609 53723903 -199532680 - HERV16 LTR ERVL -2991 2005 1681 8346 207 60 29 chr2 53723966 53724371 -199532212 - L1MC3 LINE L1 -227 7558 7167 400 107 40 13 chr2 53724371 53724446 -199532137 + L1PA8 LINE L1 6095 6171 -1 8346 207 60 29 chr2 53724446 53726078 -199530505 - L1MC3 LINE L1 -618 7167 5459 229 279 163 23 chr2 53727182 53727311 -199529272 - MIR SINE MIR -96 166 20 1807 170 3 0 chr2 53727333 53727627 -199528956 + AluJb SINE Alu 1 295 -17 652 309 17 21 chr2 53728496 53728729 -199527854 + LTR16B LTR ERVL 8 239 -225 9070 62 34 6 chr2 53728732 53730748 -199525835 - L1PA5 LINE L1 -1 6153 4103 17048 192 43 41 chr2 53734522 53739262 -199517321 - L1P3 LINE L1 -1518 4943 3 242 272 87 0 chr2 53740842 53740934 -199515649 + MIR3 SINE MIR 55 154 -54 309 289 147 26 chr2 53741215 53741371 -199515212 + MLT1I LTR MaLR 227 401 -8 202 344 32 11 chr2 53741537 53741630 -199514953 - MIR3 SINE MIR -3 205 111 2039 143 3 0 chr2 53742163 53742464 -199514119 - AluSq SINE Alu -11 302 1 25 0 0 0 chr2 53742464 53742489 -199514094 + AT_rich Low_complexity Low_complexity 1 25 0 427 347 32 23 chr2 53742959 53743175 -199513408 + L1PA13 LINE L1 788 1005 -6569 3589 259 29 26 chr2 53743177 53744481 -199512102 + L1PA13 LINE L1 2231 3496 -4088 2015 141 24 0 chr2 53744509 53744806 -199511777 - AluSx SINE Alu -8 304 1 2984 115 14 5 chr2 53744806 53745241 -199511342 - MLT2A1 LTR ERVL -5 439 1 2719 75 6 0 chr2 53745241 53745601 -199510982 - HERVL-A1 LTR ERVL 0 5654 5293 14808 86 21 1 chr2 53745602 53747566 -199509017 - HERVL LTR ERVL -3160 2494 491 6631 216 19 56 chr2 53747568 53749202 -199507381 - THE1C-int LTR MaLR -76 1575 3 1695 166 46 40 chr2 53749204 53749577 -199507006 - THE1C LTR MaLR 0 375 1 423 0 0 0 chr2 53749593 53749640 -199506943 + (CA)n Simple_repeat Simple_repeat 2 48 0 1875 184 50 24 chr2 53749640 53749797 -199506786 + L1P LINE L1 4839 4991 -1171 1756 193 3 3 chr2 53749797 53750097 -199506486 + AluJb SINE Alu 3 302 -10 1875 184 50 24 chr2 53750097 53750473 -199506110 + L1P LINE L1 4991 5379 -783 246 361 27 22 chr2 53750563 53750746 -199505837 + L2 LINE L2 2675 2858 -456 2290 89 7 0 chr2 53750930 53751221 -199505362 - AluSg SINE Alu -17 293 1 1919 109 76 0 chr2 53751651 53751926 -199504657 - AluSq SINE Alu -17 296 1 21 0 0 0 chr2 53753359 53753380 -199503203 + AT_rich Low_complexity Low_complexity 1 21 0 2264 90 0 7 chr2 53753380 53753670 -199502913 + AluSg SINE Alu 1 288 -22 243 347 157 30 chr2 53753680 53753942 -199502641 + L2 LINE L2 2533 2827 -487 227 283 67 100 chr2 53753938 53754058 -199502525 + L2 LINE L2 3154 3269 -3 * 256 320 40 7 chr2 53754609 53754872 -199501711 - L1MEc LINE L1 -4561 2020 1705 1627 150 141 28 chr2 53755311 53755638 -199500945 - THE1B LTR MaLR 0 364 1 25 0 0 0 chr2 53755854 53755879 -199500704 + AT_rich Low_complexity Low_complexity 1 25 0 1450 214 3 14 chr2 53756282 53756577 -199500006 + MLT2D LTR ERVL 1 292 -122 258 211 0 0 chr2 53756594 53756646 -199499937 - MLT2C2 LTR ERVL -52 412 361 246 62 0 0 chr2 53756647 53756679 -199499904 + (TG)n Simple_repeat Simple_repeat 2 33 0 664 135 0 0 chr2 53756695 53756791 -199499792 + MLT1C LTR MaLR 370 465 -2 23 33 0 0 chr2 53757333 53757363 -199499220 + AT_rich Low_complexity Low_complexity 1 30 0 2122 114 7 3 chr2 53757536 53757835 -199498748 - AluSp SINE Alu -13 300 1 21 0 0 0 chr2 53758598 53758619 -199497964 + AT_rich Low_complexity Low_complexity 1 21 0 222 284 82 75 chr2 53758682 53758816 -199497767 + MIR SINE MIR 64 198 -64 25 51 0 0 chr2 53760076 53760115 -199496468 + AT_rich Low_complexity Low_complexity 1 39 0 297 51 0 0 chr2 53760909 53760948 -199495635 + (TG)n Simple_repeat Simple_repeat 2 40 0 1800 161 0 0 chr2 53761255 53761534 -199495049 - AluSc SINE Alu -30 279 1 7428 28 2 1 chr2 53762949 53764306 -199492277 + L1PA4 LINE L1 4514 5872 -283 7460 32 6 0 chr2 53764406 53765709 -199490874 + L1PA4 LINE L1 4846 6153 -2 1594 195 114 56 chr2 53765993 53766474 -199490109 - MER67D LTR ERV1 0 514 6 1746 111 8 8 chr2 53766474 53766727 -199489856 + AluSc SINE Alu 54 306 -3 203 329 44 7 chr2 53766922 53767059 -199489524 + MIR SINE MIR 119 260 -2 216 280 20 0 chr2 53768893 53768943 -199487640 - MIR SINE MIR -139 69 19 569 283 153 25 chr2 53771062 53771416 -199485167 + L1MEd LINE L1 812 1210 -4909 230 0 0 32 chr2 53771450 53771481 -199485102 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 2102 275 73 57 chr2 53772632 53773900 -199482683 + L1MEc LINE L1 35 1322 -5074 816 289 122 26 chr2 53773962 53774686 -199481897 + L1MEc LINE L1 1401 2193 -4203 * 1299 147 58 0 chr2 53774685 53774860 -199481723 - L1P4 LINE L1 -496 5670 5478 207 0 0 0 chr2 53774860 53774883 -199481700 + (TTG)n Simple_repeat Simple_repeat 1 23 0 1299 147 58 0 chr2 53774883 53774932 -199481651 - L1P4 LINE L1 -688 5478 5433 305 243 87 6 chr2 53774958 53775131 -199481452 + L1MEc LINE L1 2179 2365 -4031 6640 60 23 0 chr2 53775312 53776218 -199480365 - L1PA7 LINE L1 -7 6147 5224 1982 72 18 0 chr2 53776223 53776499 -199480084 + L1PA7 LINE L1 4918 5198 -948 221 389 16 8 chr2 53776514 53776640 -199479943 + MIR SINE MIR 53 179 -83 1004 264 38 63 chr2 53777020 53777418 -199479165 + MLT1B LTR MaLR 1 388 -2 3044 204 9 3 chr2 53778579 53779221 -199477362 - L1M4c LINE L1 -1836 4808 4163 3528 214 17 8 chr2 53779293 53780166 -199476417 + L1 LINE L1 4316 5196 -950 3907 272 59 34 chr2 53780167 53780839 -199475744 - L1M4c LINE L1 -3248 3396 2742 426 39 0 0 chr2 53780839 53780891 -199475692 + (TG)n Simple_repeat Simple_repeat 2 53 0 3907 272 59 34 chr2 53780891 53783387 -199473196 - L1M4c LINE L1 -3902 2742 34 26 0 0 0 chr2 53784493 53784519 -199472064 + AT_rich Low_complexity Low_complexity 1 26 0 236 253 17 84 chr2 53785012 53785154 -199471429 - MIR SINE MIR -56 206 76 6515 74 3 3 chr2 53786558 53787453 -199469130 + L1PA3 LINE L1 5261 6155 0 1742 145 3 40 chr2 53787487 53787790 -199468793 + AluSx SINE Alu 1 292 -20 546 146 0 11 chr2 53787915 53788004 -199468579 - MLT1A2 LTR MaLR -285 89 2 180 328 8 72 chr2 53791268 53791393 -199465190 + L3b LINE CR1 1428 1544 -39 181 328 0 0 chr2 53791497 53791555 -199465028 - L2 LINE L2 -298 2974 2917 2148 130 3 0 chr2 53792171 53792472 -199464111 - AluSx SINE Alu -10 302 1 966 210 9 21 chr2 53793074 53793307 -199463276 + L1PB4 LINE L1 5927 6156 0 1764 270 18 50 chr2 53793407 53793973 -199462610 + MER77 LTR ERV1 57 604 -1 5311 148 38 5 chr2 53794404 53795080 -199461503 - L1MA5A LINE L1 -3 6294 5577 210 37 0 0 chr2 53795080 53795107 -199461476 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 5311 148 38 5 chr2 53795107 53795379 -199461204 - L1MA5A LINE L1 -720 5577 5315 6062 82 4 46 chr2 53795380 53796301 -199460282 - L1PA10 LINE L1 -1 6167 5285 3166 168 59 3 chr2 53796301 53796915 -199459668 + L1P LINE L1 4511 5158 -988 4655 193 12 14 chr2 53796926 53797967 -199458616 - L1MA5A LINE L1 -816 5330 4292 2163 110 7 3 chr2 53797988 53798296 -199458287 - AluSc SINE Alu 0 309 1 335 204 23 0 chr2 53799386 53799474 -199457109 + L1MC4 LINE L1 6614 6703 -1339 348 111 0 0 chr2 53799605 53799659 -199456924 + (TA)n Simple_repeat Simple_repeat 1 54 0 210 297 0 0 chr2 53799916 53799980 -199456603 + (TG)n Simple_repeat Simple_repeat 1 64 0 1103 221 93 37 chr2 53800871 53801192 -199455391 - MER2 DNA MER2_type 0 345 7 460 206 0 10 chr2 53801892 53801994 -199454589 - L1PA15 LINE L1 0 6165 6065 304 284 11 0 chr2 53802947 53803042 -199453541 + MER5A DNA MER1_type 9 104 -85 204 218 35 11 chr2 53804740 53804827 -199451756 + GA-rich Low_complexity Low_complexity 1 89 0 232 316 40 46 chr2 53805031 53805183 -199451400 - L2 LINE L2 -1339 1975 1825 180 275 0 0 chr2 53805329 53805369 -199451214 - L2 LINE L2 -86 3227 3188 347 340 19 0 chr2 53805606 53805712 -199450871 + MER20B DNA MER1_type 104 211 -572 935 314 88 15 chr2 53806660 53807309 -199449274 - L2 LINE L2 -17 3296 2595 2260 145 6 0 chr2 53807309 53807667 -199448916 - MER46B DNA MER2_type -1 235 1 416 342 8 0 chr2 53807822 53807939 -199448644 - L2 LINE L2 -9 3304 3187 953 282 124 35 chr2 53809189 53809796 -199446787 - L1MC4 LINE L1 -442 7600 6940 1074 284 93 40 chr2 53809819 53810477 -199446106 - L1ME3A LINE L1 -26 6144 5452 636 278 55 33 chr2 53810523 53810886 -199445697 - L1ME3A LINE L1 -1544 4602 4232 384 22 0 0 chr2 53810986 53811031 -199445552 + (TA)n Simple_repeat Simple_repeat 2 46 0 586 284 81 0 chr2 53811063 53811299 -199445284 - L1ME3A LINE L1 -1962 4184 3930 2133 103 3 0 chr2 53811335 53811650 -199444933 - AluY SINE Alu 0 311 1 289 139 76 25 chr2 53811769 53811848 -199444735 - L1ME3A LINE L1 -2431 3715 3633 334 325 64 54 chr2 53811848 53812128 -199444455 - L1ME LINE L1 -5129 941 659 1900 231 9 7 chr2 53813997 53814430 -199442153 - L1MC3 LINE L1 -1225 6560 6127 2432 52 0 10 chr2 53814620 53814928 -199441655 - AluY SINE Alu -6 305 1 24 67 0 0 chr2 53814941 53814986 -199441597 + AT_rich Low_complexity Low_complexity 1 45 0 25 51 0 0 chr2 53816482 53816521 -199440062 + AT_rich Low_complexity Low_complexity 1 39 0 360 0 0 0 chr2 53816780 53816820 -199439763 + (CA)n Simple_repeat Simple_repeat 2 41 0 1145 202 20 12 chr2 53818128 53818381 -199438202 - L1 LINE L1 -2003 4143 3889 * 4063 185 55 38 chr2 53818367 53819522 -199437061 + L1MA9 LINE L1 5005 6156 -156 625 328 114 8 chr2 53819547 53819940 -199436643 + ERVL LTR ERVL 3594 4028 -1736 772 338 23 32 chr2 53819992 53820424 -199436159 + ERVL LTR ERVL 4155 4582 -1072 2114 113 11 0 chr2 53822176 53822487 -199434096 + AluSx SINE Alu 1 314 0 1398 235 31 48 chr2 53823035 53823427 -199433156 + MLT1B LTR MaLR 4 388 -2 27 0 0 0 chr2 53823552 53823579 -199433004 + AT_rich Low_complexity Low_complexity 1 27 0 244 208 19 0 chr2 53823973 53824079 -199432504 + (TA)n Simple_repeat Simple_repeat 1 108 0 730 288 84 103 chr2 53824748 53825440 -199431143 - MER21B LTR ERV1 -157 706 28 39 22 0 0 chr2 53826558 53826604 -199429979 + AT_rich Low_complexity Low_complexity 1 46 0 333 47 0 0 chr2 53826632 53826675 -199429908 + (CA)n Simple_repeat Simple_repeat 2 44 0 1172 235 78 57 chr2 53826723 53827223 -199429360 - MER39 LTR ERV1 -9 686 9 1562 217 77 72 chr2 53827371 53827928 -199428655 + MER34C LTR ERV1 26 585 0 306 73 0 0 chr2 53827957 53827998 -199428585 + (TG)n Simple_repeat Simple_repeat 2 42 0 318 243 139 85 chr2 53828683 53828808 -199427775 + HAL1 LINE L1 884 1001 -1506 4240 125 29 13 chr2 53828808 53829488 -199427095 + LTR8 LTR ERV1 1 691 0 318 243 139 85 chr2 53829488 53829621 -199426962 + HAL1 LINE L1 1001 1156 -1351 1101 151 5 5 chr2 53829654 53829846 -199426737 - AluSg/x SINE Alu 0 312 121 592 279 11 33 chr2 53829846 53830122 -199426461 - AluSq SINE Alu -7 306 37 430 286 23 8 chr2 53830124 53830257 -199426326 - AluYa5 SINE Alu -166 135 1 6110 138 17 0 chr2 53830547 53831481 -199425102 - L1P LINE L1 -5186 960 11 390 205 53 3 chr2 53831787 53831896 -199424687 + L1ME LINE L1 5459 5575 -591 270 0 0 0 chr2 53832459 53832489 -199424094 + (TG)n Simple_repeat Simple_repeat 1 30 0 348 64 0 0 chr2 53832489 53832536 -199424047 + (GA)n Simple_repeat Simple_repeat 2 48 0 2382 159 31 80 chr2 53832654 53833250 -199423333 - MER4E LTR ERV1 0 766 1 421 296 153 14 chr2 53833615 53833838 -199422745 - MIR SINE MIR -1 261 8 28 0 0 0 chr2 53833889 53833917 -199422666 + AT_rich Low_complexity Low_complexity 1 28 0 317 280 130 0 chr2 53834305 53834405 -199422178 - L2 LINE L2 0 3313 3201 228 383 43 28 chr2 53834580 53834721 -199421862 - MIR3 SINE MIR -64 144 2 25 0 0 0 chr2 53834739 53834764 -199421819 + AT_rich Low_complexity Low_complexity 1 25 0 703 214 0 0 chr2 53835430 53835561 -199421022 - FLAM_A SINE Alu -5 137 7 3981 125 303 105 chr2 53835722 53837142 -199419441 - pTR5 LTR ERV1 0 2438 738 24 0 0 0 chr2 53838870 53838894 -199417689 + AT_rich Low_complexity Low_complexity 1 24 0 321 159 0 63 chr2 53839049 53839112 -199417471 - L1PA8A LINE L1 -6 6125 6067 426 298 62 6 chr2 53840992 53841170 -199415413 - MIR SINE MIR 0 262 75 210 313 176 42 chr2 53841358 53841716 -199414867 - L3 LINE CR1 -697 880 475 25 0 0 0 chr2 53841853 53841878 -199414705 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr2 53842047 53842075 -199414508 + AT_rich Low_complexity Low_complexity 1 28 0 231 328 0 0 chr2 53842472 53842536 -199414047 - tRNA-Ile-ATT tRNA tRNA -10 67 4 371 331 29 6 chr2 53843707 53843882 -199412701 - MIR SINE MIR -10 252 74 236 185 19 0 chr2 53844290 53844344 -199412239 - L1MA9 LINE L1 -5 6307 6253 1357 229 41 33 chr2 53844383 53844771 -199411812 + MSTD LTR MaLR 17 396 0 3625 283 29 54 chr2 53844773 53846002 -199410581 + MSTD-int LTR MaLR 2 1199 -536 1383 233 54 41 chr2 53846002 53846371 -199410212 + MSTD LTR MaLR 23 396 0 224 220 20 0 chr2 53846580 53846630 -199409953 + CT-rich Low_complexity Low_complexity 2 52 0 1146 228 35 40 chr2 53847050 53847362 -199409221 + L1M4 LINE L1 2554 2865 -3281 1922 125 3 33 chr2 53847362 53847666 -199408917 - AluSg SINE Alu -15 295 1 1146 228 35 40 chr2 53847666 53847757 -199408826 + L1M4 LINE L1 2865 2955 -3191 987 188 19 62 chr2 53847859 53848033 -199408550 - AluSg SINE Alu -5 295 138 2077 95 0 14 chr2 53848033 53848318 -199408265 - AluSq SINE Alu 0 313 33 987 188 19 62 chr2 53848318 53848451 -199408132 - AluSg SINE Alu -162 138 1 308 268 8 49 chr2 53848652 53848775 -199407808 + LTR8A LTR ERV1 171 288 -439 824 201 96 78 chr2 53848805 53849138 -199407445 + LTR8A LTR ERV1 286 624 -103 744 169 0 0 chr2 53850324 53850468 -199406115 - FLAM_C SINE Alu 0 144 1 25 0 0 0 chr2 53851173 53851198 -199405385 + AT_rich Low_complexity Low_complexity 1 25 0 1849 97 12 8 chr2 53851982 53852241 -199404342 - AluSq SINE Alu 0 313 54 1663 255 147 23 chr2 53852272 53853040 -199403543 + L1MC3 LINE L1 5463 6325 -1460 701 248 20 0 chr2 53853031 53853229 -199403354 + L1MD3 LINE L1 7770 7971 -24 * 763 245 56 7 chr2 53853265 53853534 -199403049 - L1M4 LINE L1 -1491 5466 5185 507 250 35 30 chr2 53853667 53853867 -199402716 - L1M4 LINE L1 -5327 1532 1332 340 252 19 28 chr2 53854677 53854784 -199401799 - MER113 DNA MER1_type? -146 375 270 22 0 0 0 chr2 53854870 53854892 -199401691 + AT_rich Low_complexity Low_complexity 1 22 0 202 300 0 0 chr2 53854960 53854966 -199401617 + (TA)n Simple_repeat Simple_repeat 2 7 -54 1203 212 59 82 chr2 53854966 53855390 -199401193 + MLT2D LTR ERVL 1 414 0 202 300 0 0 chr2 53855390 53855443 -199401140 + (TA)n Simple_repeat Simple_repeat 6 61 0 28 48 0 0 chr2 53855817 53855859 -199400724 + AT_rich Low_complexity Low_complexity 1 42 0 215 209 0 0 chr2 53856808 53856851 -199399732 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 194 174 72 29 chr2 53858484 53858553 -199398030 - L3 LINE CR1 -284 1293 1222 429 270 50 87 chr2 53859553 53859794 -199396789 + Charlie2b DNA MER1_type 6 237 -2545 263 215 38 13 chr2 53859855 53859934 -199396649 + Charlie2b DNA MER1_type 554 634 -2148 246 105 0 0 chr2 53859994 53860032 -199396551 + (TC)n Simple_repeat Simple_repeat 1 38 0 266 207 81 45 chr2 53860166 53860277 -199396306 + Charlie2a DNA MER1_type 1499 1613 -1249 182 171 24 0 chr2 53860299 53860340 -199396243 + (TAA)n Simple_repeat Simple_repeat 3 44 0 27 0 0 0 chr2 53860530 53860557 -199396026 + AT_rich Low_complexity Low_complexity 1 27 0 451 319 71 11 chr2 53860678 53860860 -199395723 - MIR3 SINE MIR -6 202 10 515 298 31 24 chr2 53861607 53861862 -199394721 + MIR SINE MIR 2 258 -4 433 332 168 10 chr2 53862236 53862622 -199393961 + HAL1 LINE L1 92 538 -1969 1896 296 105 39 chr2 53862780 53864328 -199392255 + HAL1 LINE L1 857 2506 -1 643 99 0 0 chr2 53866263 53866354 -199390229 + AluY SINE Alu 212 302 -9 214 145 53 40 chr2 53868145 53868221 -199388362 + (TATAA)n Simple_repeat Simple_repeat 4 80 0 372 275 45 30 chr2 53868229 53868429 -199388154 + L1 LINE L1 2408 2610 -3536 390 74 0 0 chr2 53868607 53868661 -199387922 + (TA)n Simple_repeat Simple_repeat 1 54 0 4668 158 49 65 chr2 53868785 53869939 -199386644 - L1MA9 LINE L1 -6 6306 5164 2977 184 41 33 chr2 53869943 53870677 -199385906 + L1 LINE L1 4153 4892 -1254 303 261 115 35 chr2 53870742 53870968 -199385615 + L1ME3 LINE L1 1495 1738 -4658 546 192 10 0 chr2 53871055 53871159 -199385424 + FLAM_C SINE Alu 23 127 -16 614 340 66 18 chr2 53871277 53871657 -199384926 + L1ME3 LINE L1 2010 2407 -3989 956 288 174 24 chr2 53871688 53873083 -199383500 + L1ME3 LINE L1 2428 4030 -2185 793 333 40 16 chr2 53873201 53873651 -199382932 + L1ME3 LINE L1 5575 6035 -196 1961 128 17 17 chr2 53873928 53874225 -199382358 - AluSx SINE Alu -15 297 1 476 346 58 33 chr2 53874329 53874811 -199381772 + L1ME1 LINE L1 5439 5932 -234 23 0 0 0 chr2 53874894 53874917 -199381666 + AT_rich Low_complexity Low_complexity 1 23 0 271 202 12 24 chr2 53874949 53875033 -199381550 + (TA)n Simple_repeat Simple_repeat 2 84 0 180 0 0 0 chr2 53875082 53875102 -199381481 + (TA)n Simple_repeat Simple_repeat 2 21 0 824 141 8 0 chr2 53875378 53875499 -199381084 - MSTB LTR MaLR -1 425 304 22 56 0 0 chr2 53875505 53875541 -199381042 + AT_rich Low_complexity Low_complexity 1 36 0 334 236 188 6 chr2 53875584 53875749 -199380834 - Charlie7 DNA MER1_type -1568 1044 850 2872 195 12 0 chr2 53875749 53876313 -199380270 - L1P LINE L1 -1594 4552 3982 3263 132 53 12 chr2 53876315 53876876 -199379707 + L1PA15 LINE L1 5580 6163 -2 716 340 49 19 chr2 53877102 53877544 -199379039 - Charlie7 DNA MER1_type -2061 551 88 2026 111 0 4 chr2 53877544 53877856 -199378727 + AluSx SINE Alu 14 324 0 716 340 49 19 chr2 53877856 53877947 -199378636 - Charlie7 DNA MER1_type -2524 88 1 2106 98 3 0 chr2 53878606 53878893 -199377690 + AluSg SINE Alu 1 288 -22 417 39 0 0 chr2 53880113 53880164 -199376419 + (CA)n Simple_repeat Simple_repeat 2 52 0 327 282 16 65 chr2 53881373 53881497 -199375086 + MER69 DNA AcHobo 2 119 -2407 288 276 66 33 chr2 53881492 53881673 -199374910 + MER69 DNA AcHobo 2339 2525 -1 * 228 111 0 0 chr2 53882033 53882069 -199374514 + (T)n Simple_repeat Simple_repeat 1 36 0 328 279 128 17 chr2 53883329 53883501 -199373082 + MIR SINE MIR 57 247 -15 185 256 0 0 chr2 53884150 53884189 -199372394 + L2 LINE L2 3264 3302 -11 22 0 0 0 chr2 53884193 53884215 -199372368 + AT_rich Low_complexity Low_complexity 1 22 0 403 362 12 0 chr2 53884583 53884746 -199371837 + MIR SINE MIR 5 169 -93 21 36 0 0 chr2 53885247 53885275 -199371308 + AT_rich Low_complexity Low_complexity 1 28 0 622 315 42 4 chr2 53886219 53886457 -199370126 - MIR SINE MIR -10 252 6 180 0 0 0 chr2 53886843 53886863 -199369720 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 875 255 30 5 chr2 53887055 53887255 -199369328 - MLT1A1 LTR MaLR 0 365 161 2354 62 7 10 chr2 53887272 53887576 -199369007 - AluY SINE Alu -7 304 2 20857 29 4 1 chr2 53888108 53891372 -199365211 - L1PA3 LINE L1 -69 6086 2816 35 78 0 0 chr2 53891501 53891578 -199365005 + AT_rich Low_complexity Low_complexity 1 77 0 442 329 31 0 chr2 53891713 53891874 -199364709 + MIR SINE MIR 90 255 -7 212 333 0 0 chr2 53893192 53893267 -199363316 + (CA)n Simple_repeat Simple_repeat 1 75 0 206 307 78 60 chr2 53893511 53893677 -199362906 + L3 LINE CR1 1106 1274 -303 233 316 117 41 chr2 53894717 53894913 -199361670 + L3 LINE CR1 1240 1450 -127 235 330 22 0 chr2 53895119 53895210 -199361373 - Charlie7 DNA MER1_type -2511 101 9 251 98 66 0 chr2 53896090 53896151 -199360432 + GA-rich Low_complexity Low_complexity 2 66 0 1250 119 0 0 chr2 53896844 53897020 -199359563 + AluSg/x SINE Alu 129 304 -8 293 331 97 6 chr2 53897209 53897384 -199359199 + MER117 DNA MER1_type 2 192 -5 815 212 35 19 chr2 53898906 53899142 -199357441 - L1MA4 LINE L1 -3 6302 6069 257 321 56 12 chr2 53901270 53901432 -199355151 - L1MC/D LINE L1 -694 5648 5480 404 311 71 24 chr2 53901462 53901886 -199354697 - L1MC/D LINE L1 -1158 4971 4528 969 215 62 91 chr2 53901892 53902232 -199354351 + MER2 DNA MER2_type 8 337 -8 1461 141 21 0 chr2 53902304 53902538 -199354045 - L1PB1 LINE L1 -7 6144 5906 205 183 17 33 chr2 53902622 53902682 -199353901 + T-rich Low_complexity Low_complexity 5 63 0 243 0 0 0 chr2 53902694 53902721 -199353862 + (TTA)n Simple_repeat Simple_repeat 2 28 0 2543 11 3 0 chr2 53902727 53903014 -199353569 - AluYb8 SINE Alu -30 288 1 416 317 63 23 chr2 53903077 53903380 -199353203 - L1MC/D LINE L1 -4910 1209 895 197 32 0 32 chr2 53903577 53903608 -199352975 + (TTA)n Simple_repeat Simple_repeat 1 30 0 6555 77 10 0 chr2 53903610 53904723 -199351860 - L1PA7 LINE L1 -38 6116 4996 454 272 75 69 chr2 53906202 53906375 -199350208 + MIR SINE MIR 2 175 -87 22 0 0 0 chr2 53906392 53906414 -199350169 + AT_rich Low_complexity Low_complexity 1 22 0 402 312 19 32 chr2 53906493 53906650 -199349933 + MIR SINE MIR 34 188 -74 718 111 28 50 chr2 53906956 53907137 -199349446 + GA-rich Low_complexity Low_complexity 1 177 0 247 232 0 29 chr2 53907181 53907250 -199349333 + L1MC/D LINE L1 5694 5760 -2048 242 183 118 43 chr2 53907255 53907348 -199349235 + L1MC/D LINE L1 5695 5794 -2014 911 263 29 5 chr2 53907951 53908156 -199348427 - MER20 DNA MER1_type -2 217 8 1995 157 94 13 chr2 53908233 53908628 -199347955 + MSTA LTR MaLR 2 428 0 975 151 6 0 chr2 53908994 53909173 -199347410 - L1MA8 LINE L1 -6 6285 6106 29 47 0 0 chr2 53909599 53909642 -199346941 + AT_rich Low_complexity Low_complexity 1 43 0 373 297 86 29 chr2 53911873 53912048 -199344535 - MIR SINE MIR -74 188 4 298 298 21 21 chr2 53912372 53912466 -199344117 - MIR SINE MIR -90 172 79 195 114 97 18 chr2 53913895 53914009 -199342574 + (TTATA)n Simple_repeat Simple_repeat 5 127 0 311 239 26 0 chr2 53914009 53914137 -199342446 + (TTATA)n Simple_repeat Simple_repeat 1 131 0 232 320 95 54 chr2 53916037 53916184 -199340399 - L2 LINE L2 -5 3267 3115 381 331 29 29 chr2 53916192 53916367 -199340216 - MIR SINE MIR -27 235 61 2785 217 80 6 chr2 53916367 53917086 -199339497 + L1MD1 LINE L1 5336 6234 -8 1318 251 65 64 chr2 53917089 53917870 -199338713 + L1ME1 LINE L1 2274 3055 -3091 * 2208 246 49 53 chr2 53917869 53919094 -199337489 + L1ME1 LINE L1 4768 5998 -168 4443 174 74 20 chr2 53919133 53919620 -199336963 + L1MA8 LINE L1 5256 5716 -575 243 61 0 0 chr2 53919620 53919653 -199336930 + (CA)n Simple_repeat Simple_repeat 2 34 0 4443 174 74 20 chr2 53919653 53920139 -199336444 + L1MA8 LINE L1 5716 6281 -10 247 307 18 0 chr2 53920178 53920292 -199336291 + L1MA10 LINE L1 6211 6326 -8 2291 172 10 11 chr2 53920978 53921388 -199335195 - MSTB1 LTR MaLR -2 419 20 25 90 0 0 chr2 53921626 53921693 -199334890 + AT_rich Low_complexity Low_complexity 1 67 0 31876 62 3 4 chr2 53921868 53927058 -199329525 - L1PA5 LINE L1 0 6154 978 5804 200 14 19 chr2 53927231 53928345 -199328238 + L1MA3 LINE L1 16 1124 -6441 2480 158 20 0 chr2 53928349 53928747 -199327836 - MSTA LTR MaLR 0 428 23 2924 218 19 16 chr2 53928765 53929388 -199327195 - MSTA-int LTR MaLR -14 1637 1013 2696 207 13 13 chr2 53929397 53930034 -199326549 + L1MA3 LINE L1 6059 6695 -870 381 138 58 227 chr2 53930038 53930133 -199326450 + L1MA3 LINE L1 6674 6767 -820 246 143 0 0 chr2 53930133 53930182 -199326401 + Alu SINE Alu 118 166 0 381 138 58 227 chr2 53930182 53930263 -199326320 + L1MA3 LINE L1 6767 6860 -727 10003 192 89 19 chr2 53930264 53936495 -199320088 + L1PB1 LINE L1 15 6860 -7 2432 153 9 20 chr2 53936525 53936964 -199319619 + L1MA3 LINE L1 6847 7280 -444 1303 223 11 8 chr2 53936968 53937228 -199319355 - MSTB LTR MaLR -165 261 1 427 171 13 0 chr2 53937228 53937304 -199319279 - L1M2 LINE L1 -6772 77 1 2775 7 0 0 chr2 53937442 53937746 -199318837 - AluY SINE Alu -7 304 1 626 327 22 9 chr2 53938054 53938280 -199318303 + MIR SINE MIR 32 260 -2 341 282 106 11 chr2 53939581 53939769 -199316814 + L1MC5 LINE L1 7023 7228 -733 431 256 88 44 chr2 53939905 53940155 -199316428 + L1MC5 LINE L1 7312 7572 -389 966 42 0 0 chr2 53940969 53941088 -199315495 + (TGG)n Simple_repeat Simple_repeat 3 121 0 2020 57 57 0 chr2 53941930 53942211 -199314372 - AluY SINE Alu -14 297 1 330 26 0 0 chr2 53942782 53942821 -199313762 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 749 226 0 24 chr2 53942867 53943035 -199313548 - FRAM SINE Alu -12 164 1 28 0 0 0 chr2 53944280 53944308 -199312275 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr2 53944613 53944642 -199311941 + AT_rich Low_complexity Low_complexity 1 29 0 1550 247 14 65 chr2 53944685 53945328 -199311255 + HAL1b LINE L1 323 932 -416 21 36 0 0 chr2 53947088 53947116 -199309467 + AT_rich Low_complexity Low_complexity 1 28 0 180 219 0 0 chr2 53947622 53947663 -199308920 + GA-rich Low_complexity Low_complexity 1 41 0 375 299 12 48 chr2 53947864 53948031 -199308552 - MLT1J2 LTR MaLR -289 161 1 223 382 71 12 chr2 53949132 53949302 -199307281 - L2 LINE L2 -540 2774 2595 34 55 0 0 chr2 53950311 53950366 -199306217 + AT_rich Low_complexity Low_complexity 1 55 0 234 0 0 0 chr2 53951166 53951192 -199305391 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1616 134 0 4 chr2 53951207 53951445 -199305138 - AluSc SINE Alu -72 237 1 183 250 0 0 chr2 53952422 53952458 -199304125 - L2 LINE L2 -36 3236 3201 23 0 0 0 chr2 53953117 53953140 -199303443 + AT_rich Low_complexity Low_complexity 1 23 0 234 269 0 0 chr2 53953438 53953505 -199303078 + T-rich Low_complexity Low_complexity 1 67 0 198 366 141 38 chr2 53953535 53954010 -199302573 - L2 LINE L2 -1109 2205 1682 1378 268 57 13 chr2 53954391 53954850 -199301733 - L1ME2 LINE L1 -9 6155 5680 22 35 0 0 chr2 53956228 53956257 -199300326 + AT_rich Low_complexity Low_complexity 1 29 0 240 261 0 79 chr2 53956921 53957033 -199299550 + MIR SINE MIR 32 128 -80 1001 83 0 0 chr2 53957177 53957309 -199299274 - AluY SINE Alu 0 311 180 1811 53 0 18 chr2 53957309 53957534 -199299049 - AluY SINE Alu -90 221 1 370 270 216 7 chr2 53958284 53958432 -199298151 - MER5A DNA MER1_type 0 189 11 241 296 99 0 chr2 53958829 53958900 -199297683 + L1ME LINE L1 5527 5604 -517 25 83 0 0 chr2 53959044 53959104 -199297479 + AT_rich Low_complexity Low_complexity 1 60 0 4261 168 15 3 chr2 53959128 53959849 -199296734 + Tigger1 DNA MER2_type 41 770 -1648 1538 160 33 10 chr2 53959961 53960261 -199296322 + Tigger1 DNA MER2_type 1095 1401 -1017 * 2098 157 35 5 chr2 53960259 53960634 -199295949 + Tigger1 DNA MER2_type 2033 2418 0 448 130 32 89 chr2 53960891 53960928 -199295655 - L1MA8 LINE L1 -3 6288 6250 255 61 0 0 chr2 53960928 53960961 -199295622 + (TG)n Simple_repeat Simple_repeat 2 34 0 448 130 32 89 chr2 53960961 53961046 -199295537 - L1MA8 LINE L1 -41 6250 6173 408 301 7 46 chr2 53962224 53962377 -199294206 + MER3 DNA MER1_type 44 190 -19 573 202 0 48 chr2 53964472 53964620 -199291963 + FLAM_C SINE Alu 6 143 0 1523 228 57 36 chr2 53964850 53965345 -199291238 + MLT1D LTR MaLR 1 505 0 2308 95 0 0 chr2 53965965 53966260 -199290323 + AluY SINE Alu 3 297 -14 10736 197 34 19 chr2 53966450 53968851 -199287732 + L1M4c LINE L1 19 2456 -3928 890 66 0 0 chr2 53968851 53968972 -199287611 + AluY SINE Alu 191 311 0 414 248 9 0 chr2 53968977 53969090 -199287493 + L1M4c LINE L1 2450 2563 -3819 1307 164 13 72 chr2 53969102 53969420 -199287163 + L1MB3 LINE L1 5882 6180 -3 25 0 0 0 chr2 53969525 53969550 -199287033 + AT_rich Low_complexity Low_complexity 1 25 0 189 368 40 0 chr2 53969654 53969730 -199286853 + L2 LINE L2 2542 2620 -694 268 324 56 9 chr2 53969972 53970080 -199286503 + L2 LINE L2 2900 3012 -260 462 229 9 9 chr2 53970090 53970199 -199286384 + MER94 DNA DNA 9 117 -17 201 254 0 16 chr2 53972322 53972385 -199284198 + T-rich Low_complexity Low_complexity 2 63 0 212 98 59 20 chr2 53972559 53972610 -199283973 + (TA)n Simple_repeat Simple_repeat 2 54 0 25 0 0 0 chr2 53972677 53972702 -199283881 + AT_rich Low_complexity Low_complexity 1 25 0 219 302 93 31 chr2 53973388 53973517 -199283066 - MIR SINE MIR 0 262 126 2457 64 0 0 chr2 53973517 53973813 -199282770 + AluY SINE Alu 1 296 -15 40 0 0 0 chr2 53973813 53973853 -199282730 + AT_rich Low_complexity Low_complexity 1 40 0 341 185 0 0 chr2 53975500 53975565 -199281018 - L1MA9 LINE L1 -344 5968 5904 1531 98 5 0 chr2 53975871 53976074 -199280509 + AluY SINE Alu 9 212 -99 16351 124 11 4 chr2 53976078 53976376 -199280207 + L1PA8A LINE L1 2008 2302 -3829 207 0 0 0 chr2 53976376 53976399 -199280184 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 16351 124 11 4 chr2 53976399 53980179 -199276404 + L1PA8A LINE L1 2302 6124 -7 180 380 0 0 chr2 53980920 53980991 -199275592 - MIR SINE MIR -140 122 52 433 165 13 0 chr2 53981281 53981360 -199275223 - MADE1 DNA Mariner 0 80 1 24 67 0 0 chr2 53981396 53981441 -199275142 + AT_rich Low_complexity Low_complexity 1 45 0 2554 289 37 48 chr2 53982700 53984826 -199271757 - ERVL LTR ERVL -2840 2924 763 35 63 0 0 chr2 53985255 53985318 -199271265 + AT_rich Low_complexity Low_complexity 1 63 0 180 0 0 0 chr2 53985457 53985477 -199271106 + (A)n Simple_repeat Simple_repeat 1 20 0 717 141 6 8 chr2 53986036 53986169 -199270414 - L1MB8 LINE L1 0 6164 6026 266 265 253 16 chr2 53986169 53986422 -199270161 - L1MEc LINE L1 -4683 1627 1315 1828 202 177 8 chr2 53986423 53986908 -199269675 + MLT1F1 LTR MaLR 1 567 0 370 252 8 34 chr2 53986936 53986978 -199269605 - L1ME3A LINE L1 -11 6159 6117 2335 190 14 2 chr2 53986978 53987399 -199269184 + MSTB LTR MaLR 1 426 0 370 252 8 34 chr2 53987399 53987475 -199269108 - L1ME3A LINE L1 -53 6117 6044 888 234 95 54 chr2 53987506 53987825 -199268758 - L1MEc LINE L1 -4866 1253 906 1772 156 40 3 chr2 53987825 53988146 -199268437 - MER44D DNA MER2_type -2 607 5 888 234 95 54 chr2 53988146 53988310 -199268273 - L1MEc LINE L1 -5213 906 750 1967 125 7 0 chr2 53990248 53990575 -199266008 - AluSx SINE Alu 0 329 1 643 261 108 5 chr2 53990983 53991186 -199265397 + MER58A DNA MER1_type 1 224 0 253 309 41 10 chr2 53992653 53992750 -199263833 - MIR3 SINE MIR -18 190 91 201 240 13 80 chr2 53992889 53992964 -199263619 - L2 LINE L2 -92 3221 3152 1086 306 74 23 chr2 53993014 53993107 -199263476 - L2 LINE L2 -135 3178 3091 539 125 0 0 chr2 53993107 53993187 -199263396 + MADE1 DNA Mariner 1 80 0 1086 306 74 23 chr2 53993187 53993650 -199262933 - L2 LINE L2 -222 3091 2589 202 369 139 8 chr2 53993763 53993885 -199262698 + MIR SINE MIR 10 147 -115 2237 100 0 3 chr2 53994672 53995005 -199261578 - AluY SINE Alu 0 334 3 329 327 78 69 chr2 53995119 53995425 -199261158 + L2 LINE L2 3005 3313 0 1932 186 12 3 chr2 53995756 53996100 -199260483 + MER7A DNA MER2_type 2 346 0 927 235 201 93 chr2 53996509 53997091 -199259492 + MLT1E1 LTR MaLR 1 645 -9 191 367 44 52 chr2 53998495 53998724 -199257859 - L2 LINE L2 -215 3057 2831 855 78 0 0 chr2 53998769 53998885 -199257698 + (TA)n Simple_repeat Simple_repeat 2 117 0 2538 40 0 3 chr2 53999777 54000074 -199256509 + AluY SINE Alu 1 296 -15 25 83 0 0 chr2 54000559 54000619 -199255964 + AT_rich Low_complexity Low_complexity 1 60 0 893 200 27 0 chr2 54001281 54001466 -199255117 - AluJo SINE Alu -3 309 120 444 290 93 21 chr2 54001472 54001665 -199254918 - MIR SINE MIR -55 207 1 25 65 0 0 chr2 54002041 54002087 -199254496 + AT_rich Low_complexity Low_complexity 1 46 0 22 35 0 0 chr2 54002583 54002612 -199253971 + AT_rich Low_complexity Low_complexity 1 29 0 297 139 28 14 chr2 54002779 54002851 -199253732 + CT-rich Low_complexity Low_complexity 1 73 0 23 33 0 0 chr2 54002934 54002964 -199253619 + AT_rich Low_complexity Low_complexity 1 30 0 513 254 97 51 chr2 54003109 54003499 -199253084 - L1MC5 LINE L1 -49 7912 7505 243 191 91 91 chr2 54003594 54003704 -199252879 - L1MC4 LINE L1 -547 7495 7386 710 282 50 51 chr2 54003757 54004343 -199252240 - L1MC4 LINE L1 -733 7228 6675 279 160 0 0 chr2 54004563 54004638 -199251945 + (TA)n Simple_repeat Simple_repeat 2 76 0 303 288 155 84 chr2 54004682 54005109 -199251474 - L1MC4a LINE L1 -1449 6359 5903 207 178 44 0 chr2 54005503 54005548 -199251035 + GA-rich Low_complexity Low_complexity 2 48 0 9357 106 7 1 chr2 54005965 54007340 -199249243 + L1P LINE L1 3025 4408 -1738 348 217 0 12 chr2 54008333 54008416 -199248167 + L1MB8 LINE L1 6096 6177 -1 228 258 92 8 chr2 54008525 54008645 -199247938 + L1P5 LINE L1 5314 5443 -713 328 333 41 3 chr2 54008861 54009064 -199247519 - L1ME1 LINE L1 -4 6162 5949 395 233 69 0 chr2 54009065 54009181 -199247402 - L1ME1 LINE L1 -287 5875 5752 1661 181 71 11 chr2 54009183 54009648 -199246935 - L1M4c LINE L1 -2777 3605 3113 708 235 26 0 chr2 54009648 54009801 -199246782 + Tigger2 DNA MER2_type 2562 2718 0 274 283 6 0 chr2 54009841 54010006 -199246577 - L1M4c LINE L1 -4393 1989 1818 1124 229 0 45 chr2 54010006 54010272 -199246311 + AluJo SINE Alu 1 254 -58 384 218 0 9 chr2 54010310 54010422 -199246161 - L1M4c LINE L1 -4516 1787 1322 198 0 0 0 chr2 54010422 54010444 -199246139 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 856 159 0 0 chr2 54010447 54010579 -199246004 - AluJb SINE Alu -180 132 1 2521 276 71 73 chr2 54010579 54011019 -199245564 - L1 LINE L1 -4569 1322 882 221 56 0 28 chr2 54011019 54011055 -199245528 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2521 276 71 73 chr2 54011055 54011939 -199244644 - L1 LINE L1 -5009 882 1 931 274 108 60 chr2 54012133 54012817 -199243766 - L1M4 LINE L1 -1641 4505 3761 2047 134 3 6 chr2 54012817 54013130 -199243453 - AluSp SINE Alu -1 312 1 931 274 108 60 chr2 54013130 54013394 -199243189 - L1M4 LINE L1 -2385 3761 3511 236 358 21 11 chr2 54014344 54014439 -199242144 - MER5B DNA MER1_type -82 96 1 695 223 57 0 chr2 54014524 54014681 -199241902 - MER20 DNA MER1_type 0 219 54 1439 167 111 48 chr2 54015415 54015768 -199240815 + THE1C LTR MaLR 1 375 0 330 301 75 60 chr2 54019484 54019683 -199236900 - L2 LINE L2 -32 3281 3080 1803 205 56 45 chr2 54019687 54020223 -199236360 - L1MB7 LINE L1 0 6184 5643 1356 209 93 60 chr2 54020223 54020621 -199235962 - MER67D LTR ERV1 0 514 104 20774 29 2 0 chr2 54020646 54023935 -199232648 - L1PA2 LINE L1 0 6155 2873 8950 54 1 8 chr2 54023935 54025272 -199231311 + L1P LINE L1 592 2046 -4100 486 114 105 86 chr2 54025273 54025378 -199231205 + MSTD LTR MaLR 290 396 0 879 179 43 0 chr2 54025400 54025584 -199230999 - L1MB7 LINE L1 -704 5474 5283 26 0 0 0 chr2 54026258 54026284 -199230299 + AT_rich Low_complexity Low_complexity 1 26 0 205 259 0 0 chr2 54026964 54027018 -199229565 - MIR SINE MIR -120 142 89 395 327 0 0 chr2 54027229 54027330 -199229253 - MIR SINE MIR -113 149 49 21 0 0 0 chr2 54027485 54027506 -199229077 + AT_rich Low_complexity Low_complexity 1 21 0 961 311 18 6 chr2 54027631 54027962 -199228621 + L1MEc LINE L1 37 371 -6025 1039 301 87 16 chr2 54027973 54028700 -199227883 + L1MEc LINE L1 672 1449 -4947 6816 134 21 14 chr2 54028960 54031121 -199225462 - L1MA1 LINE L1 -16 6286 4109 1600 275 75 22 chr2 54031136 54032195 -199224388 - L1ME3 LINE L1 -163 6235 5127 267 294 25 8 chr2 54032406 54032525 -199224058 - L1ME3 LINE L1 -4999 1385 1265 2014 109 0 0 chr2 54033924 54034189 -199222394 + AluSg SINE Alu 1 265 -45 314 283 68 26 chr2 54034194 54034385 -199222198 + L1ME LINE L1 5546 5744 -377 5437 161 32 27 chr2 54034664 54036087 -199220496 - L1PB1 LINE L1 0 6151 4720 207 0 0 0 chr2 54036087 54036110 -199220473 + (TA)n Simple_repeat Simple_repeat 1 23 0 5437 161 32 27 chr2 54036110 54036575 -199220008 - L1PB1 LINE L1 -1431 4720 4259 21 36 0 0 chr2 54036596 54036624 -199219959 + AT_rich Low_complexity Low_complexity 1 28 0 183 319 88 33 chr2 54036987 54037078 -199219505 + L2 LINE L2 3177 3272 0 22 56 0 0 chr2 54037960 54037996 -199218587 + AT_rich Low_complexity Low_complexity 1 36 0 2768 16 0 0 chr2 54038174 54038484 -199218099 - AluYa5 SINE Alu -1 310 1 184 147 29 0 chr2 54038786 54038820 -199217763 - MIR SINE MIR 0 262 228 793 220 138 41 chr2 54038848 54039146 -199217437 - MER57A LTR ERV1 0 403 104 6584 78 3 12 chr2 54039292 54040384 -199216199 - L1PA7 LINE L1 -4 6150 5062 2538 40 0 3 chr2 54041006 54041303 -199215280 - AluY SINE Alu -15 296 1 204 360 11 45 chr2 54041364 54041453 -199215130 - MIR3 SINE MIR -120 88 3 283 310 23 0 chr2 54043098 54043185 -199213398 - MIR SINE MIR -109 153 65 349 230 38 50 chr2 54043413 54043485 -199213098 + L1M3b LINE L1 8 79 -6496 396 40 0 0 chr2 54043485 54043535 -199213048 + (CA)n Simple_repeat Simple_repeat 2 51 0 349 230 38 50 chr2 54043535 54043623 -199212960 + L1M3b LINE L1 79 354 -6221 1912 266 28 41 chr2 54044041 54044790 -199211793 + L1M4 LINE L1 2439 3177 -2969 18901 180 43 19 chr2 54044799 54047281 -199209302 + L1MA2 LINE L1 23 2647 -4918 1599 180 3 18 chr2 54047281 54047608 -199208975 - AluSx SINE Alu 0 325 3 18901 180 43 19 chr2 54047608 54049173 -199207410 + L1MA2 LINE L1 2647 4172 -3393 6080 170 30 16 chr2 54049170 54051445 -199205138 + L1MA2 LINE L1 5417 7723 0 * 8669 217 14 17 chr2 54051486 54052352 -199204231 - L1PA15 LINE L1 -3 6162 5295 2125 113 17 0 chr2 54052352 54052652 -199203931 - AluSg SINE Alu -5 305 1 8669 217 14 17 chr2 54052652 54054721 -199201862 - L1PA15 LINE L1 -870 5295 3207 22 0 0 0 chr2 54054746 54054768 -199201815 + AT_rich Low_complexity Low_complexity 1 22 0 271 271 0 0 chr2 54055015 54055074 -199201509 + GA-rich Low_complexity Low_complexity 1 59 0 231 277 119 45 chr2 54055621 54055798 -199200785 + L2 LINE L2 3121 3310 -3 389 254 186 41 chr2 54056182 54056402 -199200181 - MIR SINE MIR 0 262 11 222 105 0 0 chr2 54057128 54057166 -199199417 + (GGAA)n Simple_repeat Simple_repeat 4 41 0 31 82 0 0 chr2 54057235 54057308 -199199275 + AT_rich Low_complexity Low_complexity 1 73 0 2697 101 3 3 chr2 54057359 54057734 -199198849 - THE1C LTR MaLR 0 375 1 1457 254 14 14 chr2 54057735 54058090 -199198493 - MLT1A1 LTR MaLR 0 365 11 1338 248 65 104 chr2 54058143 54058747 -199197836 + L1M3b LINE L1 422 1001 -5574 2371 149 39 29 chr2 54058756 54058774 -199197809 + L1MA6 LINE L1 5799 5815 -485 180 0 0 0 chr2 54058774 54058794 -199197789 + (CAAAA)n Simple_repeat Simple_repeat 4 23 0 2371 149 39 29 chr2 54058794 54059265 -199197318 + L1MA6 LINE L1 5815 6293 -7 22 0 0 0 chr2 54060399 54060421 -199196162 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr2 54060922 54060945 -199195638 + AT_rich Low_complexity Low_complexity 1 23 0 5558 114 22 0 chr2 54060952 54061751 -199194832 - L1P3 LINE L1 -5642 819 3 24868 145 11 20 chr2 54061757 54065997 -199190586 + L1PA12 LINE L1 1148 6178 -1406 26 82 0 0 chr2 54066415 54066476 -199190107 + AT_rich Low_complexity Low_complexity 1 61 0 213 178 0 0 chr2 54067059 54067104 -199189479 + (TATG)n Simple_repeat Simple_repeat 4 48 0 22 117 0 0 chr2 54067138 54067258 -199189325 + AT_rich Low_complexity Low_complexity 1 120 0 1579 241 72 97 chr2 54067811 54068578 -199188005 - L1ME3A LINE L1 -62 6108 5361 342 244 117 48 chr2 54068596 54068955 -199187628 - L1ME LINE L1 -536 5585 5197 824 221 14 116 chr2 54069212 54069488 -199187095 - MLT2B1 LTR ERVL -35 485 238 368 204 204 29 chr2 54069484 54069575 -199187008 - MLT2B1 LTR ERVL -399 121 9 * 3662 188 38 10 chr2 54069575 54070288 -199186295 + MER44D DNA MER2_type 1 605 0 368 204 204 29 chr2 54070288 54070299 -199186284 - MLT2B1 LTR ERVL -511 9 1 1842 278 67 38 chr2 54070317 54071137 -199185446 + L1ME1 LINE L1 5317 6160 -6 385 241 9 46 chr2 54071219 54071327 -199185256 + L1MC5 LINE L1 7311 7414 -547 182 381 36 36 chr2 54071584 54071752 -199184831 + MER5A DNA MER1_type 19 186 -3 468 303 64 14 chr2 54072153 54072371 -199184212 + L1ME LINE L1 5563 5791 -330 30 77 0 0 chr2 54073198 54073263 -199183320 + AT_rich Low_complexity Low_complexity 1 65 0 204 40 0 0 chr2 54073525 54073550 -199183033 + (T)n Simple_repeat Simple_repeat 1 25 0 7745 14 0 0 chr2 54073558 54074447 -199182136 - L1HS LINE L1 0 6155 5267 402 83 97 14 chr2 54075390 54075462 -199181121 - MADE1 DNA Mariner 0 80 3 506 196 10 0 chr2 54075715 54075812 -199180771 - MLT1E3 LTR MaLR -526 98 1 238 231 0 0 chr2 54076524 54076576 -199180007 - L2 LINE L2 0 3272 3221 2146 156 8 16 chr2 54077185 54077563 -199179020 + THE1C LTR MaLR 1 375 0 9141 135 50 12 chr2 54077563 54079086 -199177497 + THE1C-int LTR MaLR 1 1580 0 1796 160 47 25 chr2 54079090 54079453 -199177130 + THE1C LTR MaLR 5 375 0 2016 171 28 14 chr2 54079955 54080377 -199176206 + L1MA8 LINE L1 5864 6291 0 316 313 43 9 chr2 54080453 54080568 -199176015 + HAL1b LINE L1 673 791 -557 288 289 97 0 chr2 54080574 54080688 -199175895 + HAL1b LINE L1 747 871 -477 1973 192 31 30 chr2 54080877 54081432 -199175151 - MLT2A2 LTR ERVL 0 554 1 10995 112 11 3 chr2 54081432 54082987 -199173596 - HERVL-A2 LTR ERVL 0 5654 4088 2342 119 0 20 chr2 54082989 54083343 -199173240 + THE1C LTR MaLR 29 375 0 588 256 82 39 chr2 54083395 54083734 -199172849 - MSTD LTR MaLR -12 384 1 26 0 0 0 chr2 54083901 54083927 -199172656 + AT_rich Low_complexity Low_complexity 1 26 0 1094 170 36 0 chr2 54084481 54084705 -199171878 - L1MA7 LINE L1 -4 6287 6056 3407 169 19 5 chr2 54084709 54085352 -199171231 - L1MA7 LINE L1 -368 5923 5272 2227 127 37 8 chr2 54085393 54085747 -199170836 - THE1B LTR MaLR 0 364 1 2084 148 12 9 chr2 54085978 54086316 -199170267 - THE1B LTR MaLR -25 339 1 7471 154 55 30 chr2 54086316 54087858 -199168725 - THE1B-int LTR MaLR 0 1580 1 2159 170 3 3 chr2 54087858 54088222 -199168361 - THE1B LTR MaLR 0 364 1 215 302 0 0 chr2 54088889 54088942 -199167641 - L2 LINE L2 -2 3270 3218 1423 274 54 87 chr2 54089159 54089933 -199166650 - LTR41 LTR ERVL -22 751 3 520 298 82 12 chr2 54089981 54090226 -199166357 - MLT1J LTR MaLR -249 262 1 503 330 139 59 chr2 54090770 54091242 -199165341 - L2 LINE L2 -22 3291 2782 24 0 0 0 chr2 54091545 54091569 -199165014 + AT_rich Low_complexity Low_complexity 1 24 0 235 317 24 12 chr2 54092649 54092731 -199163852 + L2 LINE L2 3186 3268 -4 444 77 0 0 chr2 54092940 54093005 -199163578 + (GA)n Simple_repeat Simple_repeat 1 65 0 233 237 40 0 chr2 54093090 54093166 -199163417 - L1MC4 LINE L1 -1344 6698 6620 496 307 94 44 chr2 54094628 54094990 -199161593 + LTR16A1 LTR ERVL 48 427 -30 2074 98 0 7 chr2 54096005 54096282 -199160301 + AluSp SINE Alu 23 297 -16 241 333 0 31 chr2 54097030 54097126 -199159457 + MIR SINE MIR 69 144 -64 430 308 17 32 chr2 54097130 54097319 -199159264 - MIR SINE MIR -66 196 16 209 361 0 0 chr2 54097323 54097384 -199159199 + L3b LINE CR1 1519 1579 -4 24 77 0 0 chr2 54098364 54098416 -199158167 + AT_rich Low_complexity Low_complexity 1 52 0 387 0 0 0 chr2 54098667 54098710 -199157873 + (CA)n Simple_repeat Simple_repeat 2 44 0 1995 99 28 7 chr2 54100371 54100655 -199155928 + AluSc SINE Alu 1 290 -19 229 171 14 29 chr2 54100754 54100824 -199155759 + (TATG)n Simple_repeat Simple_repeat 4 72 0 809 288 131 53 chr2 54100826 54101373 -199155210 - L2 LINE L2 -19 3294 2696 2119 114 3 10 chr2 54101373 54101672 -199154911 - AluSg SINE Alu -13 297 1 809 288 131 53 chr2 54101672 54101772 -199154811 - L2 LINE L2 -617 2696 2605 204 40 0 0 chr2 54101864 54101889 -199154694 + (T)n Simple_repeat Simple_repeat 1 25 0 222 320 64 0 chr2 54102394 54102472 -199154111 + L2 LINE L2 3230 3312 -1 504 231 120 23 chr2 54103126 54103342 -199153241 + L1ME1 LINE L1 4981 5217 -929 740 244 130 5 chr2 54103571 54103943 -199152640 + L1ME1 LINE L1 5301 5738 -428 483 315 37 51 chr2 54103943 54104238 -199152345 + LTR41 LTR ERVL 1 291 -482 712 214 73 76 chr2 54104449 54104767 -199151816 + LTR41 LTR ERVL 459 523 0 1267 267 33 33 chr2 54104767 54105194 -199151389 + L1ME1 LINE L1 5734 6160 -6 315 250 27 54 chr2 54105337 54105485 -199151098 + MLT1L LTR MaLR 179 322 -293 343 344 161 10 chr2 54105656 54105792 -199150791 - MLT1H LTR MaLR -196 353 239 835 148 0 0 chr2 54105792 54105927 -199150656 - L1PA10 LINE L1 -4 6164 6030 343 344 161 10 chr2 54105927 54106095 -199150488 - MLT1H LTR MaLR -310 239 3 2808 16 0 3 chr2 54106276 54106595 -199149988 - AluYb8 SINE Alu 0 318 1 2043 138 140 8 chr2 54107761 54108139 -199148444 - MSTA LTR MaLR 0 428 1 754 299 29 12 chr2 54108785 54109029 -199147554 + MIR SINE MIR 15 262 0 24 0 0 0 chr2 54109055 54109079 -199147504 + AT_rich Low_complexity Low_complexity 1 24 0 23 78 0 0 chr2 54109718 54109769 -199146814 + AT_rich Low_complexity Low_complexity 1 51 0 343 375 31 18 chr2 54111550 54111779 -199144804 + MIR SINE MIR 21 252 -10 1022 277 32 61 chr2 54111829 54112335 -199144248 + L1MD1 LINE L1 4512 5002 -1144 544 146 11 0 chr2 54112340 54112429 -199144154 + MSTD LTR MaLR 1 90 -306 527 204 0 0 chr2 54112416 54112514 -199144069 + MSTB2 LTR MaLR 360 457 0 * 2910 206 60 95 chr2 54112516 54113774 -199142809 + L1MD1 LINE L1 5005 6239 -3 22 0 0 0 chr2 54114857 54114879 -199141704 + AT_rich Low_complexity Low_complexity 1 22 0 896 244 78 27 chr2 54116730 54117062 -199139521 - L1MD3 LINE L1 -877 7118 6770 1964 259 50 22 chr2 54117172 54117549 -199139034 + L1ME1 LINE L1 5440 5805 -361 2048 112 3 3 chr2 54117549 54117834 -199138749 + AluSx SINE Alu 3 287 -25 258 32 0 0 chr2 54117834 54117865 -199138718 + (GGAGA)n Simple_repeat Simple_repeat 3 33 0 1964 259 50 22 chr2 54117865 54118132 -199138451 + L1ME1 LINE L1 5804 6103 -63 1206 327 141 39 chr2 54118355 54119773 -199136810 + L2 LINE L2 1737 3308 -5 248 258 0 15 chr2 54120060 54120126 -199136457 + A-rich Low_complexity Low_complexity 3 67 0 1709 122 75 77 chr2 54122107 54122483 -199134100 - THE1C LTR MaLR 0 375 1 2178 97 0 7 chr2 54123004 54123304 -199133279 - AluSg1 SINE Alu -11 298 1 25 95 0 0 chr2 54123482 54123556 -199133027 + AT_rich Low_complexity Low_complexity 1 74 0 24 85 0 0 chr2 54124275 54124334 -199132249 + AT_rich Low_complexity Low_complexity 1 59 0 24 0 0 0 chr2 54124395 54124419 -199132164 + AT_rich Low_complexity Low_complexity 1 24 0 459 249 133 39 chr2 54125101 54125282 -199131301 - LTR50 LTR ERVL -592 203 6 442 291 74 0 chr2 54126451 54126599 -199129984 - MLT1A1 LTR MaLR -2 588 430 371 237 9 70 chr2 54126748 54126800 -199129783 - MLT1G1 LTR MaLR -487 108 65 2055 182 30 37 chr2 54126800 54127229 -199129354 + MSTC LTR MaLR 3 428 0 371 237 9 70 chr2 54127229 54127290 -199129293 - MLT1G1 LTR MaLR -530 65 2 1774 99 0 36 chr2 54127672 54127963 -199128620 - AluY SINE Alu 0 321 40 225 262 16 0 chr2 54128390 54128451 -199128132 + (TG)n Simple_repeat Simple_repeat 1 62 0 2364 104 0 0 chr2 54130068 54130376 -199126207 - AluY SINE Alu -3 308 1 225 186 17 34 chr2 54131809 54131868 -199124715 + T-rich Low_complexity Low_complexity 1 58 0 2085 127 27 41 chr2 54131976 54132345 -199124238 + THE1B LTR MaLR 1 364 0 10755 103 46 2 chr2 54132345 54133858 -199122725 + THE1B-int LTR MaLR 1 1580 0 1791 144 41 36 chr2 54133858 54134220 -199122363 + THE1B LTR MaLR 1 364 0 193 286 18 0 chr2 54134448 54134504 -199122079 - MIR SINE MIR -156 106 50 22 0 0 0 chr2 54134713 54134735 -199121848 + AT_rich Low_complexity Low_complexity 1 22 0 754 315 158 35 chr2 54134898 54135718 -199120865 + L2 LINE L2 1977 2897 -417 270 328 94 39 chr2 54136316 54136496 -199120087 + L2 LINE L2 2953 3142 -171 1564 176 72 16 chr2 54136512 54136830 -199119753 - MLT1A1 LTR MaLR -29 336 1 257 353 42 19 chr2 54136870 54137131 -199119452 - L1MC/D LINE L1 -2150 5658 5392 300 53 0 0 chr2 54137707 54137745 -199118838 + (CTATT)n Simple_repeat Simple_repeat 2 39 0 241 230 69 46 chr2 54137909 54137996 -199118587 - MLT1J LTR MaLR -288 223 135 1226 119 0 11 chr2 54140714 54140899 -199115684 + LTR17 LTR ERV1 1 183 -597 4102 145 31 43 chr2 54140899 54142294 -199114289 + pTR5 LTR ERV1 741 2438 0 3874 118 47 3 chr2 54142298 54142872 -199113711 + LTR17 LTR ERV1 182 780 0 239 175 78 87 chr2 54142937 54143040 -199113543 + L1MC/D LINE L1 5368 5469 -2339 227 297 42 36 chr2 54143067 54143259 -199113324 - L1MC/D LINE L1 -848 5511 5319 470 211 111 12 chr2 54143534 54143705 -199112878 - MER53 DNA DNA -1 188 1 208 154 26 0 chr2 54143725 54143764 -199112819 + CT-rich Low_complexity Low_complexity 2 41 0 2299 163 34 14 chr2 54143903 54144321 -199112262 - MSTB LTR MaLR 0 426 1 340 364 45 23 chr2 54144379 54144599 -199111984 - MLT1J LTR MaLR -177 334 110 390 268 33 46 chr2 54145968 54146121 -199110462 - L1MEc LINE L1 -4729 1667 1517 342 45 0 0 chr2 54146126 54146170 -199110413 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 14016 198 59 20 chr2 54146170 54147182 -199109401 - L1PB1 LINE L1 -41 6826 5855 1830 112 4 0 chr2 54147182 54147423 -199109160 - AluSx SINE Alu -68 244 3 14016 198 59 20 chr2 54147423 54152956 -199103627 - L1PB1 LINE L1 -1012 5855 6 795 212 6 0 chr2 54153433 54153598 -199102985 - L1PA16 LINE L1 -3 6163 5998 1541 124 0 4 chr2 54153600 54153833 -199102750 + L1PA16 LINE L1 5664 5895 -271 192 291 185 60 chr2 54154034 54154336 -199102247 - L2 LINE L2 -1689 1625 1286 389 306 91 11 chr2 54154418 54154604 -199101979 + MIR SINE MIR 21 221 -41 31 26 0 0 chr2 54154932 54154970 -199101613 + AT_rich Low_complexity Low_complexity 1 38 0 843 234 85 0 chr2 54155134 54155335 -199101248 + MER58A DNA MER1_type 4 221 -3 21 0 0 0 chr2 54155421 54155442 -199101141 + AT_rich Low_complexity Low_complexity 1 21 0 775 307 146 26 chr2 54156353 54157075 -199099508 + L2 LINE L2 2199 3016 -256 3989 139 2 0 chr2 54157264 54157866 -199098717 - HERVH LTR ERV1 -2623 5090 4488 3608 91 4 6 chr2 54157869 54158388 -199098195 - HERVH LTR ERV1 -3721 3992 3475 681 169 16 8 chr2 54158494 54158618 -199097965 + AluJb SINE Alu 178 302 -10 244 236 64 43 chr2 54158641 54158727 -199097856 + L1M4 LINE L1 2855 2947 -3199 1918 144 3 6 chr2 54158727 54159039 -199097544 + AluSx SINE Alu 1 311 -1 244 236 64 43 chr2 54159039 54159092 -199097491 + L1M4 LINE L1 2947 2997 -3149 1214 155 26 26 chr2 54159116 54159342 -199097241 + AluJo SINE Alu 86 311 -1 365 272 82 14 chr2 54159461 54159608 -199096975 + L1M4 LINE L1 5550 5706 -472 801 217 36 68 chr2 54159804 54159889 -199096694 - L1MA10 LINE L1 -73 6261 6175 1868 179 6 3 chr2 54159889 54160201 -199096382 - AluSq SINE Alu 0 313 1 801 217 36 68 chr2 54160201 54160396 -199096187 - L1MA10 LINE L1 -159 6175 5990 281 276 129 71 chr2 54160430 54160921 -199095662 - L1ME LINE L1 -340 5822 5290 543 307 46 43 chr2 54160959 54161285 -199095298 - L1ME LINE L1 -907 5239 4913 335 328 74 35 chr2 54161334 54161590 -199094993 - L1ME4a LINE L1 -129 5992 5727 700 239 46 5 chr2 54161599 54161796 -199094787 - L1MA9 LINE L1 -38 6274 6070 1161 216 12 0 chr2 54161796 54162041 -199094542 + L1M2 LINE L1 5522 5769 -543 2708 91 93 7 chr2 54162953 54163362 -199093221 - MLT2A1 LTR ERVL 0 444 1 210 246 0 35 chr2 54163591 54163648 -199092935 - MIR3 SINE MIR -3 205 151 212 336 24 24 chr2 54163676 54163801 -199092782 + MER5A DNA MER1_type 59 183 -6 22 56 0 0 chr2 54164527 54164563 -199092020 + AT_rich Low_complexity Low_complexity 1 36 0 26 30 0 0 chr2 54164910 54164943 -199091640 + AT_rich Low_complexity Low_complexity 1 33 0 1906 178 53 21 chr2 54165858 54166234 -199090349 + MSTD LTR MaLR 1 388 -8 457 251 100 126 chr2 54166565 54167154 -199089429 + MER34C LTR ERV1 10 583 -2 455 312 116 5 chr2 54167457 54167656 -199088927 + MIR SINE MIR 33 253 -9 188 281 43 93 chr2 54167691 54167830 -199088753 - L2 LINE L2 -1446 1868 1737 379 200 0 35 chr2 54168106 54168191 -199088392 + MER77 LTR ERV1 296 377 -228 401 283 73 70 chr2 54168535 54168821 -199087762 - HAL1b LINE L1 -38 1310 1024 2135 153 24 71 chr2 54168833 54169114 -199087469 + MER4B LTR ERV1 1 294 -485 774 104 88 0 chr2 54169114 54169239 -199087344 + MER85 DNA T2_type 3 138 -1 2135 153 24 71 chr2 54169239 54169583 -199087000 + MER4B LTR ERV1 294 779 0 332 285 39 0 chr2 54169819 54169949 -199086634 - HAL1b LINE L1 -591 757 623 565 95 53 21 chr2 54169974 54170069 -199086514 + MER4A LTR ERV1 1 98 -566 1794 142 6 25 chr2 54170076 54170421 -199086162 + MER4A LTR ERV1 268 664 0 43474 42 4 3 chr2 54171336 54177482 -199079101 - L1PA3 LINE L1 0 6155 1 767 139 0 23 chr2 54177484 54177613 -199078970 - AluSg/x SINE Alu -13 299 174 21 0 0 0 chr2 54178300 54178321 -199078262 + AT_rich Low_complexity Low_complexity 1 21 0 408 358 39 39 chr2 54178728 54179013 -199077570 + MLT1H LTR MaLR 227 511 -38 271 315 88 23 chr2 54179387 54179603 -199076980 + L1M4 LINE L1 -257 4294967268 -6308 3555 233 129 38 chr2 54180103 54180565 -199076018 + L1M4 LINE L1 777 1196 -5186 225 213 0 0 chr2 54180565 54180612 -199075971 + HSMAR1 DNA Mariner 1 47 -1240 3555 233 129 38 chr2 54180612 54182120 -199074463 + L1M4 LINE L1 1196 2934 -3448 7561 87 11 13 chr2 54182164 54183237 -199073346 + MER11C LTR ERVK 1 1071 0 481 138 11 0 chr2 54183975 54184062 -199072521 - L1MA5A LINE L1 -4 6293 6206 2286 92 0 3 chr2 54184107 54184410 -199072173 + AluY SINE Alu 1 302 -9 279 0 0 0 chr2 54184725 54184756 -199071827 + (TG)n Simple_repeat Simple_repeat 2 32 0 248 295 9 9 chr2 54184832 54184937 -199071646 + L1ME1 LINE L1 6060 6164 -2 1158 188 5 0 chr2 54185317 54185519 -199071064 - MER2 DNA MER2_type -142 203 1 242 368 132 9 chr2 54185603 54185717 -199070866 + L2 LINE L2 3137 3264 -8 206 352 86 43 chr2 54185852 54186085 -199070498 + MIR SINE MIR 3 245 -17 752 263 0 6 chr2 54186728 54186907 -199069676 - MER5B DNA MER1_type 0 178 1 2053 152 120 5 chr2 54189278 54189660 -199066923 + MSTB LTR MaLR 1 426 0 7578 205 49 3 chr2 54189660 54191238 -199065345 + MSTB-int LTR MaLR 1 1651 0 1990 151 67 39 chr2 54191238 54191654 -199064929 + MSTA LTR MaLR 1 428 0 1976 139 20 0 chr2 54192003 54192306 -199064277 - AluSx SINE Alu -3 309 1 1756 287 53 21 chr2 54192782 54193347 -199063236 - L1M4b LINE L1 -6270 589 7 2170 186 105 4 chr2 54194010 54194532 -199062051 + L1MA8 LINE L1 4000 4574 -1572 4883 166 43 13 chr2 54194547 54196143 -199060440 + L1MA8 LINE L1 4646 6288 -3 858 200 6 0 chr2 54196375 54196540 -199060043 - MLT1B LTR MaLR 0 390 225 23 0 0 0 chr2 54196708 54196731 -199059852 + AT_rich Low_complexity Low_complexity 1 23 0 1968 119 35 0 chr2 54196731 54197017 -199059566 + AluSq SINE Alu 1 296 -17 24 0 0 0 chr2 54197099 54197123 -199059460 + AT_rich Low_complexity Low_complexity 1 24 0 451 336 50 4 chr2 54197886 54198127 -199058456 + L1ME LINE L1 5466 5717 -453 447 126 26 33 chr2 54198163 54198314 -199058269 + (TA)n Simple_repeat Simple_repeat 1 150 0 2624 42 0 0 chr2 54198388 54198699 -199057884 + AluY SINE Alu 1 311 0 232 271 0 0 chr2 54198786 54198834 -199057749 - L1MC/D LINE L1 -2211 5580 5533 337 277 56 62 chr2 54198849 54199139 -199057444 - L1MC/D LINE L1 -681 5472 5176 855 237 170 10 chr2 54199240 54199435 -199057148 + MER7A DNA MER2_type 1 163 -2875 297 68 0 0 chr2 54199435 54199479 -199057104 + (CA)n Simple_repeat Simple_repeat 2 45 0 855 237 170 10 chr2 54199479 54199583 -199057000 + MER7A DNA MER2_type 163 346 0 64 35 0 0 chr2 54199986 54200071 -199056512 + AT_rich Low_complexity Low_complexity 1 85 0 371 288 147 45 chr2 54200147 54201022 -199055561 - L1MC/D LINE L1 -2029 4100 3136 367 239 123 85 chr2 54201121 54201543 -199055040 - L1MC/D LINE L1 -2968 3161 2724 360 382 71 32 chr2 54201819 54202102 -199054481 - L1MC/D LINE L1 -5751 368 75 402 21 0 0 chr2 54202774 54202821 -199053762 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 23 54 0 0 chr2 54204234 54204271 -199052312 + AT_rich Low_complexity Low_complexity 1 37 0 359 290 11 0 chr2 54204700 54204793 -199051790 - MER58C DNA MER1_type -1 214 121 798 270 96 28 chr2 54205059 54205394 -199051189 + MLT1F1 LTR MaLR 67 424 -118 2371 127 60 19 chr2 54207573 54208005 -199048578 + LTR7 LTR ERV1 1 450 0 1620 207 0 10 chr2 54208293 54208598 -199047985 + AluJb SINE Alu 6 307 -5 1615 211 3 3 chr2 54208598 54208905 -199047678 + AluJb SINE Alu 1 308 -4 186 43 0 0 chr2 54208989 54209012 -199047571 + (A)n Simple_repeat Simple_repeat 1 23 0 240 111 0 0 chr2 54209146 54209182 -199047401 + (T)n Simple_repeat Simple_repeat 1 36 0 21 57 0 0 chr2 54210792 54210827 -199045756 + AT_rich Low_complexity Low_complexity 1 35 0 222 91 0 0 chr2 54211209 54211242 -199045341 + (CA)n Simple_repeat Simple_repeat 2 34 0 23 33 0 0 chr2 54213054 54213084 -199043499 + AT_rich Low_complexity Low_complexity 1 30 0 512 336 24 36 chr2 54213166 54213416 -199043167 + MIR SINE MIR 13 259 -3 26 0 0 0 chr2 54214231 54214257 -199042326 + AT_rich Low_complexity Low_complexity 1 26 0 359 280 20 0 chr2 54215002 54215102 -199041481 - MIR SINE MIR -7 255 154 430 176 0 14 chr2 54215362 54215436 -199041147 - MIR SINE MIR -112 150 78 12528 153 12 22 chr2 54216345 54218508 -199038075 - Tigger1 DNA MER2_type -266 2152 11 21 82 0 0 chr2 54220271 54220320 -199036263 + AT_rich Low_complexity Low_complexity 1 49 0 195 382 57 19 chr2 54220615 54220772 -199035811 + MIR3 SINE MIR 36 198 -10 22 0 0 0 chr2 54221204 54221226 -199035357 + AT_rich Low_complexity Low_complexity 1 22 0 759 238 153 0 chr2 54221247 54221495 -199035088 - MER58B DNA MER1_type -19 322 37 1584 277 66 24 chr2 54222215 54223020 -199033563 - L1MCa LINE L1 -2576 4989 4151 17199 179 25 6 chr2 54223109 54226217 -199030366 - L1M4 LINE L1 -4385 3180 13 21 57 0 0 chr2 54226373 54226408 -199030175 + AT_rich Low_complexity Low_complexity 1 35 0 689 321 127 35 chr2 54226471 54227255 -199029328 - L1MCa LINE L1 -4638 3108 2078 23 0 0 0 chr2 54228721 54228744 -199027839 + AT_rich Low_complexity Low_complexity 1 23 0 421 305 86 7 chr2 54228784 54228935 -199027648 - MER5B DNA MER1_type 0 178 16 236 291 13 0 chr2 54229483 54229562 -199027021 + L1MCa LINE L1 125 204 -6219 4446 246 62 29 chr2 54229723 54230003 -199026580 - L1M4 LINE L1 -1303 4843 4574 2068 147 0 3 chr2 54230003 54230309 -199026274 - AluSx SINE Alu -7 305 1 4446 246 62 29 chr2 54230309 54231398 -199025185 - L1M4 LINE L1 -1572 4574 3403 1268 251 39 0 chr2 54231398 54231681 -199024902 - AluJo SINE Alu -8 294 1 4446 246 62 29 chr2 54231681 54232045 -199024538 - L1M4 LINE L1 -2743 3403 3052 345 172 0 0 chr2 54232045 54232109 -199024474 + (TA)n Simple_repeat Simple_repeat 1 64 0 38 0 0 0 chr2 54232118 54232156 -199024427 + AT_rich Low_complexity Low_complexity 1 38 0 4094 227 45 12 chr2 54232156 54233726 -199022857 - L1MC1 LINE L1 -15 6598 4955 1418 194 116 33 chr2 54233726 54234062 -199022521 - THE1B LTR MaLR 0 364 1 5156 250 34 27 chr2 54234062 54235850 -199020733 - L1MC1 LINE L1 -1467 4959 3160 944 207 53 12 chr2 54235857 54236103 -199020480 - L1MC1 LINE L1 -4343 2083 1828 3301 229 26 62 chr2 54236107 54237250 -199019333 + L1 LINE L1 2583 3684 -2462 247 139 0 0 chr2 54237250 54237286 -199019297 + Alu SINE Alu 1 36 -272 286 156 26 65 chr2 54237302 54237379 -199019204 - L1MC1 LINE L1 -4600 1826 1753 * 627 150 0 100 chr2 54237378 54237538 -199019045 + L1MCa LINE L1 1116 1259 -5682 * 4795 173 86 69 chr2 54237535 54238905 -199017678 - L1MC1 LINE L1 -4765 1661 268 1730 139 47 65 chr2 54239077 54239459 -199017124 - THE1C LTR MaLR 0 375 1 2308 255 42 16 chr2 54239459 54240134 -199016449 - L1M4b LINE L1 -5318 1541 850 2280 289 117 7 chr2 54240147 54240850 -199015733 - L1M4b LINE L1 -6054 805 26 744 317 95 7 chr2 54240882 54241428 -199015155 - L1MEc LINE L1 -3119 3096 2503 21 36 0 0 chr2 54241547 54241575 -199015008 + AT_rich Low_complexity Low_complexity 1 28 0 1495 195 44 49 chr2 54241608 54241699 -199014884 + MLT1B LTR MaLR 1 91 -299 2297 59 9 38 chr2 54241699 54242019 -199014564 + AluY SINE Alu 1 311 0 1495 195 44 49 chr2 54242019 54242317 -199014266 + MLT1B LTR MaLR 91 388 -2 510 243 79 11 chr2 54242451 54242708 -199013875 - L1MEc LINE L1 -4430 1785 1556 315 315 64 56 chr2 54242773 54242955 -199013628 - L1MEc LINE L1 -4757 1458 1272 2458 76 0 0 chr2 54242955 54243256 -199013327 + AluY SINE Alu 1 301 -10 315 315 64 56 chr2 54243256 54243340 -199013243 - L1MEc LINE L1 -4943 1272 1190 765 282 120 8 chr2 54243362 54243763 -199012820 - L1MEc LINE L1 -5291 1105 660 1805 174 0 7 chr2 54243763 54244067 -199012516 + AluJb SINE Alu 1 302 -10 29 28 0 0 chr2 54244714 54244750 -199011833 + AT_rich Low_complexity Low_complexity 1 36 0 370 287 95 44 chr2 54246951 54247268 -199009315 + L1M4 LINE L1 2154 2486 -3660 192 357 153 0 chr2 54247972 54248070 -199008513 + MIR SINE MIR 8 120 -142 219 181 28 42 chr2 54248142 54248214 -199008369 + (AAATG)n Simple_repeat Simple_repeat 3 73 0 1615 231 68 40 chr2 54249007 54249510 -199007073 + LTR40a LTR ERVL 3 519 0 461 269 67 100 chr2 54250490 54250881 -199005702 - L2 LINE L2 0 3313 2936 826 321 126 29 chr2 54251005 54251585 -199004998 + L2 LINE L2 1216 1851 -1463 23 54 0 0 chr2 54252512 54252549 -199004034 + AT_rich Low_complexity Low_complexity 1 37 0 574 247 30 30 chr2 54253141 54253307 -199003276 - MER3 DNA MER1_type -42 167 2 329 316 17 8 chr2 54253421 54253538 -199003045 + L1M4 LINE L1 3930 4047 -2099 1212 283 47 39 chr2 54253561 54254226 -199002357 - L1M4 LINE L1 -2206 3940 3271 230 56 28 0 chr2 54254234 54254270 -199002313 + (TC)n Simple_repeat Simple_repeat 2 38 0 255 191 125 48 chr2 54254313 54254481 -199002102 - L1M4 LINE L1 -2912 3234 3054 1910 267 52 9 chr2 54254507 54255163 -199001420 - L1ME1 LINE L1 -23 6077 5394 1520 269 50 17 chr2 54255181 54256041 -199000542 - L1ME1 LINE L1 -767 5313 4339 29 47 0 0 chr2 54256051 54256094 -199000489 + AT_rich Low_complexity Low_complexity 1 43 0 189 107 0 0 chr2 54256095 54256123 -199000460 + (TATG)n Simple_repeat Simple_repeat 3 30 0 * 192 77 0 0 chr2 54256122 54256148 -199000435 + (CAGA)n Simple_repeat Simple_repeat 2 27 0 1982 195 147 42 chr2 54256148 54256856 -198999727 + LTR48 LTR ERV1 3 705 -2 1348 254 63 54 chr2 54256913 54257482 -198999101 - L1ME1 LINE L1 -1827 4253 3676 3100 159 11 66 chr2 54257482 54258130 -198998453 - LTR9 LTR ERV1 0 612 1 1348 254 63 54 chr2 54258130 54258229 -198998354 - L1ME1 LINE L1 -2404 3676 3579 642 112 0 10 chr2 54258230 54258328 -198998255 + MER4A LTR ERV1 1 97 -567 1665 122 8 75 chr2 54258329 54258699 -198997884 + MER4A LTR ERV1 261 664 0 2562 101 70 32 chr2 54258702 54259227 -198997356 + MER4A-int LTR ERV1 1 608 -5990 1407 243 72 9 chr2 54259383 54259729 -198996854 + MER4A-int LTR ERV1 1845 2212 -4119 4288 139 27 10 chr2 54259768 54260701 -198995882 + MER4A-int LTR ERV1 194 609 -4406 4352 109 62 8 chr2 54260702 54261443 -198995140 + MER4A-int LTR ERV1 1764 2544 -4054 8968 114 37 12 chr2 54261466 54262912 -198993671 + MER4A-int LTR ERV1 3881 5361 -585 281 133 0 0 chr2 54262917 54262962 -198993621 - MADE1 DNA Mariner 0 80 36 2271 113 43 0 chr2 54262964 54263310 -198993273 + MER4A-int LTR ERV1 6233 6593 -5 534 151 43 0 chr2 54263321 54263414 -198993169 + MER4A LTR ERV1 1 97 -567 1718 135 159 75 chr2 54263415 54263786 -198992797 + MER4A LTR ERV1 261 662 -2 555 281 100 4 chr2 54263788 54264069 -198992514 - L1ME1 LINE L1 -2499 3581 3274 289 242 77 33 chr2 54264129 54264311 -198992272 - L1ME1 LINE L1 -2919 3161 2972 348 278 28 67 chr2 54264400 54264682 -198991901 - L1ME1 LINE L1 -5766 304 48 1042 295 54 58 chr2 54264736 54265766 -198990817 - L1MEc LINE L1 -4541 1855 830 387 230 80 0 chr2 54265951 54266051 -198990532 + MER58A DNA MER1_type 1 108 -116 255 250 0 0 chr2 54266058 54266118 -198990465 + MER58A DNA MER1_type 159 218 -6 418 337 52 89 chr2 54266709 54267172 -198989411 + L2 LINE L2 2835 3280 -33 564 285 58 24 chr2 54267189 54267396 -198989187 - MIR SINE MIR 0 262 49 1393 223 70 59 chr2 54268865 54269364 -198987219 - MLT1D LTR MaLR 0 595 1 245 373 96 34 chr2 54269610 54269819 -198986764 - L2 LINE L2 -226 3046 2825 597 226 151 35 chr2 54271880 54272079 -198984504 + MER58A DNA MER1_type 1 222 -2 549 253 71 12 chr2 54272343 54272513 -198984070 + MIR SINE MIR 37 216 -46 27 0 0 0 chr2 54272859 54272886 -198983697 + AT_rich Low_complexity Low_complexity 1 27 0 3395 180 14 14 chr2 54275638 54276282 -198980301 - LTR48B LTR ERV1 0 644 1 229 216 39 0 chr2 54276282 54276333 -198980250 + (CATATA)n Simple_repeat Simple_repeat 4 56 0 503 118 140 11 chr2 54276453 54276546 -198980037 + MER51A LTR ERV1 1 105 -529 2051 133 15 3 chr2 54276562 54276886 -198979697 + MER51B LTR ERV1 50 377 0 22 0 0 0 chr2 54277548 54277570 -198979013 + AT_rich Low_complexity Low_complexity 1 22 0 3304 198 34 20 chr2 54278389 54279189 -198977394 - Charlie1 DNA MER1_type 0 2761 1951 4125 57 42 0 chr2 54279253 54279798 -198976785 - L1PA7 LINE L1 0 6154 5587 851 47 0 0 chr2 54279798 54279905 -198976678 + L1PA7 LINE L1 5481 5587 -567 558 246 25 113 chr2 54279916 54280156 -198976427 - Charlie1 DNA MER1_type -870 1891 1673 296 264 28 0 chr2 54280291 54280363 -198976220 + MER58A DNA MER1_type 151 224 0 1940 112 4 14 chr2 54280470 54280748 -198975835 - AluSx SINE Alu -37 275 1 1410 233 28 17 chr2 54281305 54281666 -198974917 + MLT1A1 LTR MaLR 1 365 0 283 291 95 32 chr2 54282595 54282730 -198973853 - L3b LINE CR1 -85 1498 1346 2244 119 68 3 chr2 54282730 54283082 -198973501 - THE1C LTR MaLR 0 375 1 283 291 95 32 chr2 54283082 54283135 -198973448 - L3b LINE CR1 -237 1346 1298 3837 189 84 15 chr2 54283457 54285110 -198971473 + L1MB2 LINE L1 4275 6033 -138 518 291 101 61 chr2 54285211 54285398 -198971185 - HERV16 LTR ERVL -2917 2079 1901 2291 98 0 3 chr2 54285398 54285693 -198970890 + AluSg SINE Alu 1 294 -16 518 291 101 61 chr2 54285693 54285787 -198970796 - HERV16 LTR ERVL -3095 1901 1812 1345 187 53 21 chr2 54285787 54286071 -198970512 - AluJb SINE Alu -19 293 1 518 291 101 61 chr2 54286071 54286166 -198970417 - HERV16 LTR ERVL -3184 1812 1687 623 122 0 0 chr2 54286202 54286292 -198970291 + AluS SINE Alu 2 91 -221 2451 84 3 0 chr2 54286913 54287223 -198969360 - AluY SINE Alu 0 311 1 261 157 0 29 chr2 54287898 54287968 -198968615 + L1MC4 LINE L1 6636 6703 -1339 219 36 0 0 chr2 54287981 54288009 -198968574 + (T)n Simple_repeat Simple_repeat 1 28 0 2358 84 3 0 chr2 54289503 54289980 -198966603 + AluY SINE Alu 1 478 0 2240 108 0 0 chr2 54290111 54290399 -198966184 + AluSq SINE Alu 2 289 -24 180 0 0 0 chr2 54290404 54290424 -198966159 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 2032 120 11 0 chr2 54290587 54290871 -198965712 + AluJo SINE Alu 1 287 -25 1487 161 65 32 chr2 54291293 54291572 -198965011 + AluJo SINE Alu 1 288 -24 2217 164 43 68 chr2 54291960 54292489 -198964094 + L1MDa LINE L1 1882 2397 -4143 2243 85 7 33 chr2 54292489 54292796 -198963787 + AluSq SINE Alu 1 299 -14 1884 132 10 3 chr2 54292798 54293086 -198963497 + AluSx SINE Alu 1 290 -22 916 143 7 0 chr2 54293198 54293345 -198963238 - HERVH LTR ERV1 -4426 3287 3140 * 14409 122 11 26 chr2 54293324 54296084 -198960499 - HERVH LTR ERV1 -4718 2995 1 2907 85 93 0 chr2 54296090 54296500 -198960083 - LTR7 LTR ERV1 -2 448 1 595 207 33 7 chr2 54346653 54346803 -198909780 + L1MB3 LINE L1 6029 6182 -1 712 272 18 0 chr2 54346859 54347028 -198909555 - MER5A DNA MER1_type 0 189 18 510 133 8 39 chr2 54347491 54347619 -198908964 + (TA)n Simple_repeat Simple_repeat 1 124 0 2799 192 52 36 chr2 54347879 54348576 -198908007 + L1MC2 LINE L1 5617 6324 -20 42 57 0 0 chr2 54348875 54348945 -198907638 + AT_rich Low_complexity Low_complexity 1 70 0 285 109 47 0 chr2 54348955 54349019 -198907564 + (TA)n Simple_repeat Simple_repeat 2 68 0 2766 3 3 3 chr2 54349328 54349638 -198906945 + AluYa5 SINE Alu 1 310 -1 710 205 21 26 chr2 54350293 54350483 -198906100 + MER53 DNA DNA 1 189 0 640 264 66 0 chr2 54352155 54352337 -198904246 + MIR SINE MIR 58 251 -11 302 163 0 0 chr2 54352343 54352392 -198904191 + U5 snRNA snRNA 3 51 -65 408 130 0 0 chr2 54352506 54352575 -198904008 + (GA)n Simple_repeat Simple_repeat 2 70 0 705 290 43 9 chr2 54352819 54353050 -198903533 - L1ME1 LINE L1 -4 6231 5993 5444 148 33 13 chr2 54353080 54353282 -198903301 - L1MA2 LINE L1 -1 6302 6105 2129 102 0 0 chr2 54353282 54353565 -198903018 - AluSq SINE Alu -19 294 12 5444 148 33 13 chr2 54353565 54354824 -198901759 - L1MA2 LINE L1 -198 6105 4868 1736 253 67 19 chr2 54354826 54355392 -198901191 - L1ME1 LINE L1 -235 6000 5408 845 299 102 21 chr2 54357393 54357921 -198898662 - L1ME1 LINE L1 -4536 1860 1290 254 210 40 10 chr2 54357993 54358093 -198898490 + (TA)n Simple_repeat Simple_repeat 2 104 0 924 284 55 41 chr2 54358189 54358749 -198897834 - L1ME1 LINE L1 -5216 1180 613 327 374 55 14 chr2 54358746 54358965 -198897618 - L1ME1 LINE L1 -5991 405 178 * 669 45 0 0 chr2 54359295 54359384 -198897199 + (TA)n Simple_repeat Simple_repeat 2 90 0 21 71 0 0 chr2 54359450 54359492 -198897091 + AT_rich Low_complexity Low_complexity 1 42 0 832 216 0 37 chr2 54359543 54359733 -198896850 + FRAM SINE Alu 1 176 0 277 122 28 47 chr2 54359947 54360054 -198896529 + (TA)n Simple_repeat Simple_repeat 1 105 0 311 301 177 48 chr2 54361797 54362153 -198894430 + L1MC4a LINE L1 4599 5000 -1146 625 338 105 11 chr2 54362483 54363006 -198893577 + L1MC4a LINE L1 5465 6036 -1772 24 32 0 0 chr2 54363082 54363113 -198893470 + AT_rich Low_complexity Low_complexity 1 31 0 23 33 0 0 chr2 54363382 54363412 -198893171 + AT_rich Low_complexity Low_complexity 1 30 0 2143 58 0 4 chr2 54363422 54363699 -198892884 + AluY SINE Alu 35 310 -1 2108 88 0 0 chr2 54364585 54364859 -198891724 - AluY SINE Alu -37 274 1 283 277 54 68 chr2 54365607 54365755 -198890828 + L2 LINE L2 3159 3304 -9 485 316 68 29 chr2 54366244 54366450 -198890133 - MIR SINE MIR -42 220 7 270 143 0 0 chr2 54367301 54367350 -198889233 + (TA)n Simple_repeat Simple_repeat 1 49 0 2241 119 30 19 chr2 54367501 54367872 -198888711 + THE1C LTR MaLR 1 375 0 349 311 116 18 chr2 54367872 54368097 -198888486 - L1MC/D LINE L1 -2013 5795 5549 21 0 0 0 chr2 54368167 54368188 -198888395 + AT_rich Low_complexity Low_complexity 1 21 0 318 217 40 91 chr2 54368229 54368404 -198888179 - HAL1 LINE L1 -97 2410 2245 201 175 0 0 chr2 54368993 54369033 -198887550 + (TG)n Simple_repeat Simple_repeat 1 40 0 591 272 122 8 chr2 54369127 54369381 -198887202 - L1ME3 LINE L1 -89 6073 5791 547 214 96 39 chr2 54369398 54369576 -198887007 - AluJo SINE Alu -10 302 115 928 266 124 19 chr2 54369579 54370054 -198886529 - L1ME3 LINE L1 -393 5769 5345 1269 233 79 22 chr2 54370054 54370423 -198886160 - MLT1B LTR MaLR 0 390 1 928 266 124 19 chr2 54370423 54370777 -198885806 - L1ME3 LINE L1 -817 5345 4850 27 29 0 0 chr2 54370807 54370841 -198885742 + AT_rich Low_complexity Low_complexity 1 34 0 345 288 7 14 chr2 54371270 54371409 -198885174 - HAL1 LINE L1 -856 1651 1514 343 284 92 52 chr2 54371571 54371800 -198884783 - HAL1 LINE L1 -1158 1349 1112 184 258 194 0 chr2 54371932 54371994 -198884589 + MIR SINE MIR 183 256 -6 1928 129 4 4 chr2 54373072 54373386 -198883197 + AluSg SINE Alu 1 314 0 182 394 24 35 chr2 54373791 54373961 -198882622 + L3 LINE CR1 31 198 -1379 2450 99 8 8 chr2 54374902 54375257 -198881326 - THE1A LTR MaLR 0 355 1 4324 134 17 1 chr2 54375257 54375920 -198880663 - THE1A-int LTR MaLR 0 1580 908 2000 16 23 4 chr2 54376027 54376284 -198880299 - AluYa5 SINE Alu -49 262 1 2367 125 19 11 chr2 54376872 54377233 -198879350 + THE1B LTR MaLR 1 364 0 6546 94 5 20 chr2 54377366 54378293 -198878290 - THE1A-int LTR MaLR -666 914 2 2449 113 6 0 chr2 54378294 54378647 -198877936 - THE1A LTR MaLR 0 355 1 422 311 111 8 chr2 54379915 54380150 -198876433 - L1ME3A LINE L1 -68 6102 5844 648 305 55 22 chr2 54380294 54380655 -198875928 - HsTC2b DNA Tc2 -1 917 545 621 305 79 25 chr2 54380662 54380977 -198875606 - HsTC2b DNA Tc2 -582 333 2 235 348 80 27 chr2 54381459 54381571 -198875012 + MIR3 SINE MIR 85 202 -6 256 170 0 0 chr2 54382869 54382922 -198873661 - MER57B LTR ERV1 0 434 382 2068 135 0 3 chr2 54383303 54383606 -198872977 + AluSx SINE Alu 3 304 -8 237 203 40 27 chr2 54383815 54383889 -198872694 + MER106B DNA MER1_type 985 1059 0 212 318 70 23 chr2 54384007 54384136 -198872447 - L2 LINE L2 -50 3263 3129 341 297 70 31 chr2 54384180 54384308 -198872275 - L2 LINE L2 -4 3268 3136 553 298 83 0 chr2 54384316 54384497 -198872086 + MLT1J LTR MaLR 3 198 -313 2173 104 7 3 chr2 54386152 54386451 -198870132 + AluSp SINE Alu 2 301 -12 23 0 0 0 chr2 54386524 54386547 -198870036 + AT_rich Low_complexity Low_complexity 1 23 0 440 349 115 24 chr2 54386915 54387572 -198869011 - L1MC4a LINE L1 -684 5437 5259 25 51 0 0 chr2 54387662 54387701 -198868882 + AT_rich Low_complexity Low_complexity 1 39 0 339 201 113 130 chr2 54387879 54388118 -198868465 - L1ME LINE L1 -5312 893 659 323 394 65 29 chr2 54388373 54388683 -198867900 - L1ME LINE L1 -6034 362 42 700 303 104 62 chr2 54388801 54389504 -198867079 - L1MDa LINE L1 -4535 1847 1023 449 203 117 16 chr2 54389633 54389761 -198866822 + LTR41 LTR ERVL 1 141 -632 321 26 0 0 chr2 54389786 54389824 -198866759 + (TG)n Simple_repeat Simple_repeat 2 39 0 1628 167 4 19 chr2 54389830 54390100 -198866483 - AluSx SINE Alu -46 266 1 229 222 44 44 chr2 54390662 54390752 -198865831 + LTR41 LTR ERVL 675 764 -9 4469 85 46 5 chr2 54390786 54391420 -198865163 + PABL_A LTR ERV1 1 660 0 5662 110 8 15 chr2 54391420 54393017 -198863566 + PABL_A-int LTR ERV1 1 1649 -3366 485 172 141 2 chr2 54393017 54393215 -198863368 - LTR8 LTR ERV1 -434 257 1 6676 115 53 21 chr2 54393217 54394480 -198862103 + PABL_A-int LTR ERV1 2400 3343 -1672 2057 132 0 7 chr2 54394480 54394783 -198861800 + AluSg SINE Alu 1 301 -9 6676 115 53 21 chr2 54394783 54394965 -198861618 + PABL_A-int LTR ERV1 3343 3518 -1497 986 319 46 17 chr2 54395017 54395427 -198861156 + ERVL LTR ERVL 2386 2807 -2957 1502 313 25 21 chr2 54395871 54396436 -198860147 + ERVL LTR ERVL 3641 4207 -1557 1016 192 5 5 chr2 54396442 54396640 -198859943 - Tigger1 DNA MER2_type -1 2417 2220 829 214 0 3 chr2 54396643 54396872 -198859711 + AluJb SINE Alu 3 296 -16 10954 159 31 24 chr2 54396872 54398877 -198857706 - Tigger1 DNA MER2_type -192 2226 207 935 175 5 83 chr2 54398880 54399097 -198857486 + AluJo SINE Alu 88 287 -25 1006 205 4 34 chr2 54399104 54399338 -198857245 - Tigger1 DNA MER2_type -2191 227 1 778 274 8 28 chr2 54399358 54399606 -198856977 + ERVL LTR ERVL 4182 4424 -1230 1811 152 13 3 chr2 54399904 54400206 -198856377 - AluJb SINE Alu -4 308 4 28 29 0 0 chr2 54400209 54400244 -198856339 + AT_rich Low_complexity Low_complexity 1 35 0 3292 54 0 0 chr2 54400590 54401013 -198855570 + L1PA5 LINE L1 3603 4025 -2121 7135 48 5 0 chr2 54401013 54402562 -198854021 + L1PA5 LINE L1 4599 6151 -3 239 264 23 58 chr2 54402969 54403056 -198853527 - MIR SINE MIR -148 114 31 1088 209 85 56 chr2 54403589 54404167 -198852416 - MER39 LTR ERV1 0 639 1 311 254 34 17 chr2 54404258 54404376 -198852207 + Charlie2 DNA MER1_type 2725 2844 -18 262 265 44 10 chr2 54404859 54404973 -198851610 - L1MC4 LINE L1 -30 8002 5982 314 304 84 40 chr2 54405111 54405338 -198851245 - L1ME3A LINE L1 -202 5968 5732 1123 287 65 8 chr2 54405402 54405785 -198850798 - MER92A LTR ERV1 -5 407 3 274 261 33 22 chr2 54406810 54406902 -198849681 - MER89-int LTR ERV1 -803 3844 3752 2074 189 0 6 chr2 54408042 54408407 -198848176 - MLT1A1 LTR MaLR -2 363 1 2199 110 150 8 chr2 54408450 54408823 -198847760 + MSTA LTR MaLR 1 426 -2 789 287 11 19 chr2 54408919 54409187 -198847396 - MER89-int LTR ERV1 -3923 1013 748 401 329 66 45 chr2 54409477 54409854 -198846729 - MER89-int LTR ERV1 -2957 3844 3460 1820 171 134 15 chr2 54411187 54411597 -198844986 + LOR1b LTR ERV1 1 459 -2 1463 160 179 16 chr2 54412076 54412394 -198844189 - MSTA LTR MaLR 0 428 59 1872 126 0 0 chr2 54412394 54412680 -198843903 - MSTA-int LTR MaLR -1365 286 1 860 127 171 0 chr2 54412680 54412838 -198843745 - MSTA LTR MaLR 0 428 244 1920 95 21 7 chr2 54412838 54413122 -198843461 + AluY SINE Alu 1 288 -23 222 37 0 0 chr2 54413233 54413260 -198843323 + (A)n Simple_repeat Simple_repeat 1 27 0 1026 176 100 25 chr2 54413262 54413501 -198843082 - MSTA LTR MaLR -171 257 1 1387 192 91 50 chr2 54414077 54414473 -198842110 - MER92A LTR ERV1 0 412 1 641 236 25 12 chr2 54414518 54414679 -198841904 - MER58A DNA MER1_type 0 224 62 4950 84 3 1 chr2 54414679 54415337 -198841246 - PABL_A LTR ERV1 0 660 2 12394 74 13 2 chr2 54415338 54416995 -198839588 - PABL_A-int LTR ERV1 0 5015 3341 8818 65 114 98 chr2 54416989 54418653 -198837930 - PABL_A-int LTR ERV1 -2171 2844 1155 * 4329 70 11 32 chr2 54418649 54419274 -198837309 - PABL_A-int LTR ERV1 -4116 899 288 * 1078 82 7 7 chr2 54419274 54419421 -198837162 - PABL_A LTR ERV1 -509 151 5 238 266 31 0 chr2 54419423 54419487 -198837096 - MER58A DNA MER1_type -41 66 1 1340 195 76 92 chr2 54420927 54421362 -198835221 - LTR8A LTR ERV1 -13 714 287 795 210 62 129 chr2 54421408 54421717 -198834866 - LTR8 LTR ERV1 -439 288 1 1302 198 79 7 chr2 54421889 54422243 -198834340 + LTR29 LTR ERV1 1 424 -198 792 156 78 22 chr2 54422228 54422407 -198834176 + LTR49 LTR ERV1 407 595 0 * 21 36 0 0 chr2 54422778 54422806 -198833777 + AT_rich Low_complexity Low_complexity 1 28 0 927 243 92 36 chr2 54423470 54423775 -198832808 + MER2 DNA MER2_type 24 345 0 3044 205 30 14 chr2 54423810 54424509 -198832074 + MER67C LTR ERV1 1 710 0 12203 157 23 64 chr2 54424725 54425924 -198830659 + Tigger1 DNA MER2_type 2 1043 -1375 2174 143 28 6 chr2 54425924 54426280 -198830303 - THE1B LTR MaLR 0 364 1 12203 157 23 64 chr2 54426280 54427602 -198828981 + Tigger1 DNA MER2_type 1043 2418 0 194 295 63 0 chr2 54427660 54427755 -198828828 + MIR SINE MIR 120 220 -42 354 0 20 0 chr2 54427855 54427904 -198828679 + AluY SINE Alu 251 300 0 3107 95 7 0 chr2 54428645 54429076 -198827507 + MER57B LTR ERV1 1 434 0 3873 144 42 16 chr2 54429076 54429722 -198826861 + MER57B-int LTR ERV1 1 663 -6874 * 7755 132 35 41 chr2 54429721 54431077 -198825506 + MER57B-int LTR ERV1 1555 2903 -4634 * 20080 143 32 56 chr2 54431074 54435011 -198821572 + MER57B-int LTR ERV1 3305 7149 -388 353 190 165 0 chr2 54435025 54435104 -198821479 + LTR54B LTR ERV1 15 106 -392 231 170 38 19 chr2 54435338 54435391 -198821192 + LTR54B LTR ERV1 74 127 -371 383 43 0 0 chr2 54435391 54435437 -198821146 + MER57B-int LTR ERV1 7272 7317 -220 613 50 12 0 chr2 54435440 54435520 -198821063 + MER57B-int LTR ERV1 7457 7537 0 2905 104 7 20 chr2 54435520 54435960 -198820623 + MER57B LTR ERV1 1 434 0 23 33 0 0 chr2 54437014 54437044 -198819539 + AT_rich Low_complexity Low_complexity 1 30 0 331 325 16 16 chr2 54437329 54437455 -198819128 - MLT1I LTR MaLR -9 400 275 285 302 63 37 chr2 54437481 54437670 -198818913 - MLT1I LTR MaLR -215 194 1 180 300 0 40 chr2 54437756 54437806 -198818777 + L2 LINE L2 3251 3298 -15 2251 117 0 0 chr2 54438504 54438803 -198817780 + AluSx SINE Alu 1 299 -13 255 333 32 40 chr2 54438980 54439106 -198817477 + MIR3 SINE MIR 6 130 -78 702 288 117 29 chr2 54439931 54440316 -198816267 + L1M3e LINE L1 121 539 -6491 4189 187 58 9 chr2 54440330 54441654 -198814929 + L1M2 LINE L1 4365 5761 -551 427 323 85 30 chr2 54441637 54442020 -198814563 + L1MC4 LINE L1 6430 6917 -971 * 435 272 40 0 chr2 54442095 54442246 -198814337 + L1MC4 LINE L1 6891 7058 -937 301 259 49 25 chr2 54442230 54442311 -198814272 + L1MC4a LINE L1 5759 5841 -1967 * 568 300 31 39 chr2 54442476 54442733 -198813850 + L1MC4a LINE L1 7171 7425 -383 1535 172 62 21 chr2 54442741 54443031 -198813552 + AluJo SINE Alu 3 304 -8 229 213 21 0 chr2 54443031 54443078 -198813505 + L1MD3 LINE L1 7718 7765 -230 4314 197 27 29 chr2 54443167 54443779 -198812804 + L1MA7 LINE L1 5170 5784 -507 396 0 0 0 chr2 54443779 54443823 -198812760 + (TA)n Simple_repeat Simple_repeat 1 44 0 4314 197 27 29 chr2 54443823 54444331 -198812252 + L1MA7 LINE L1 5784 6291 0 494 246 24 9 chr2 54444403 54444547 -198812036 + L1MD3 LINE L1 7435 7735 -228 23 68 0 0 chr2 54444561 54444605 -198811978 + AT_rich Low_complexity Low_complexity 1 44 0 1970 142 0 7 chr2 54444673 54444976 -198811607 - AluSx SINE Alu -7 305 5 900 275 53 32 chr2 54445029 54445502 -198811081 + HAL1 LINE L1 1916 2398 -109 1728 335 70 60 chr2 54445610 54446818 -198809765 - HAL1 LINE L1 -644 1863 645 404 349 77 0 chr2 54446822 54447057 -198809526 - HAL1 LINE L1 -2006 501 249 5321 84 17 4 chr2 54447080 54447831 -198808752 + MER4E LTR ERV1 6 766 0 235 322 34 27 chr2 54447929 54448075 -198808508 - HAL1 LINE L1 -2360 147 1 699 226 7 0 chr2 54448471 54448608 -198807975 + Tigger3(Golem) DNA MER2_type 4 141 -2888 6285 142 39 61 chr2 54448737 54449731 -198806852 - Tigger3b DNA MER2_type -1799 1229 267 1305 147 45 16 chr2 54449731 54449976 -198806607 - L1PA14 LINE L1 -3 6158 5907 6285 142 39 61 chr2 54449976 54450237 -198806346 - Tigger3b DNA MER2_type -2761 267 2 201 237 34 0 chr2 54450237 54450296 -198806287 + (CATATA)n Simple_repeat Simple_repeat 6 66 0 231 180 0 0 chr2 54450297 54450347 -198806236 + L1MD1 LINE L1 2017 2066 -4360 1445 230 23 27 chr2 54450371 54450852 -198805731 - MLT2C2 LTR ERVL -55 409 1 1764 281 22 9 chr2 54450961 54451738 -198804845 + L1MD1 LINE L1 4462 5307 -1119 462 213 115 0 chr2 54451738 54451860 -198804723 + LTR22 LTR ERVK 1 136 -373 446 274 79 23 chr2 54451871 54452086 -198804497 + L1MD1 LINE L1 5326 5552 -874 * 1547 223 70 22 chr2 54452081 54452484 -198804099 + L1MD1 LINE L1 5810 6231 -291 25 83 0 0 chr2 54452490 54452550 -198804033 + AT_rich Low_complexity Low_complexity 1 60 0 25 0 0 0 chr2 54452601 54452626 -198803957 + AT_rich Low_complexity Low_complexity 1 25 0 1235 208 20 20 chr2 54452648 54452951 -198803632 + L1MD1 LINE L1 6220 6522 0 965 288 79 13 chr2 54452963 54453508 -198803075 + L1ME2 LINE L1 4471 5051 -1095 780 314 38 24 chr2 54453528 54453900 -198802683 + L1ME2 LINE L1 5766 6142 -22 10330 185 25 19 chr2 54454080 54454871 -198801712 + L1MA4A LINE L1 2984 3769 -2382 2081 182 41 21 chr2 54454871 54455289 -198801294 - MSTB LTR MaLR 0 426 1 10330 185 25 19 chr2 54455289 54456846 -198799737 + L1MA4A LINE L1 3769 5353 -798 1736 149 3 44 chr2 54456874 54457189 -198799394 + AluSx SINE Alu 11 312 0 534 121 0 129 chr2 54457191 54457315 -198799268 + L1MA4A LINE L1 5734 5841 -462 5380 137 25 27 chr2 54457318 54458279 -198798304 + L1MA5A LINE L1 5317 6275 -22 2109 190 69 0 chr2 54458492 54458929 -198797654 - MLT1C LTR MaLR 0 467 1 22 56 0 0 chr2 54459274 54459310 -198797273 + AT_rich Low_complexity Low_complexity 1 36 0 360 396 51 21 chr2 54461002 54461335 -198795248 - L1ME3A LINE L1 -233 5937 5595 1159 240 97 37 chr2 54462327 54462981 -198793602 + L1MC4a LINE L1 5928 6605 -1203 619 153 161 24 chr2 54462981 54463105 -198793478 - MER2 DNA MER2_type 0 345 205 2787 269 43 23 chr2 54463105 54464112 -198792471 + L1MC4a LINE L1 6725 7751 -57 213 369 128 7 chr2 54464914 54465201 -198791382 + L2 LINE L2 2734 3058 -214 263 325 68 26 chr2 54465816 54465933 -198790650 + MIR3 SINE MIR 75 196 -12 28 29 0 0 chr2 54466168 54466203 -198790380 + AT_rich Low_complexity Low_complexity 1 35 0 201 327 138 19 chr2 54466271 54466430 -198790153 - L2 LINE L2 -13 3300 3123 2174 167 29 52 chr2 54468616 54468851 -198787732 - MSTB1 LTR MaLR 0 432 210 1809 132 29 0 chr2 54468851 54469123 -198787460 - AluSx SINE Alu -32 280 1 2174 167 29 52 chr2 54469123 54469329 -198787254 - MSTB1 LTR MaLR -222 210 1 562 319 5 34 chr2 54469703 54469907 -198786676 + MIR SINE MIR 61 258 -4 194 277 0 84 chr2 54470011 54470094 -198786489 + MIR SINE MIR 113 188 -74 329 302 47 0 chr2 54470519 54470625 -198785958 - MER117 DNA MER1_type -36 161 51 1549 87 0 0 chr2 54472429 54472624 -198783959 + AluSc SINE Alu 1 195 -114 244 98 0 0 chr2 54472625 54472666 -198783917 + AluSc SINE Alu 258 298 -3 272 302 8 16 chr2 54473073 54473202 -198783381 + L1ME3A LINE L1 3813 3940 -2206 391 284 28 50 chr2 54473234 54473375 -198783208 - L2 LINE L2 -17 3296 3159 742 303 88 32 chr2 54473419 54474224 -198782359 + L1ME3A LINE L1 3998 4847 -1299 259 278 11 0 chr2 54474530 54474620 -198781963 + L1ME3A LINE L1 5191 5281 -865 2086 197 104 41 chr2 54474973 54475562 -198781021 - MER51A LTR ERV1 -8 626 1 343 323 0 0 chr2 54475563 54475662 -198780921 + L1ME3A LINE L1 5762 5860 -310 1596 243 45 35 chr2 54475812 54476326 -198780257 + LTR40a LTR ERVL 1 519 0 356 298 111 45 chr2 54476435 54476767 -198779816 - L1ME4a LINE L1 -22 6099 5746 874 241 51 31 chr2 54477619 54477913 -198778670 - MER46C DNA MER2_type -15 323 24 186 43 0 0 chr2 54478104 54478127 -198778456 + (TTATA)n Simple_repeat Simple_repeat 4 26 0 893 216 6 0 chr2 54478409 54478580 -198778003 + FAM SINE Alu 1 172 -3 367 374 32 14 chr2 54478892 54479111 -198777472 - MIR SINE MIR -8 254 32 21 0 0 0 chr2 54479299 54479320 -198777263 + AT_rich Low_complexity Low_complexity 1 21 0 227 281 118 44 chr2 54479605 54479740 -198776843 - MIR SINE MIR -46 216 72 219 139 0 0 chr2 54479863 54479899 -198776684 + (CATA)n Simple_repeat Simple_repeat 3 38 0 210 143 0 0 chr2 54479989 54480024 -198776559 + (GA)n Simple_repeat Simple_repeat 2 36 0 184 337 116 0 chr2 54480027 54480113 -198776470 - MIR SINE MIR -83 125 30 201 39 0 0 chr2 54480386 54480412 -198776171 + (CAA)n Simple_repeat Simple_repeat 2 27 0 236 370 141 0 chr2 54481390 54481574 -198775009 + MIR SINE MIR 39 248 -14 399 262 96 80 chr2 54481854 54482041 -198774542 + MIR SINE MIR 45 234 -28 264 59 0 0 chr2 54482154 54482188 -198774395 + (CA)n Simple_repeat Simple_repeat 1 34 0 222 118 0 0 chr2 54483150 54483184 -198773399 + (TC)n Simple_repeat Simple_repeat 1 34 0 405 0 0 0 chr2 54484424 54484469 -198772114 + (CA)n Simple_repeat Simple_repeat 2 46 0 454 258 164 31 chr2 54485810 54485969 -198770614 + MER5A DNA MER1_type 9 188 -1 6271 129 10 12 chr2 54486387 54486786 -198769797 + L1PA14 LINE L1 4633 5031 -1130 2195 94 3 3 chr2 54486786 54487094 -198769489 + AluY SINE Alu 1 308 -3 6271 129 10 12 chr2 54487094 54488231 -198768352 + L1PA14 LINE L1 5031 6160 -1 35 24 0 0 chr2 54488259 54488301 -198768282 + AT_rich Low_complexity Low_complexity 1 42 0 512 304 36 36 chr2 54488382 54488526 -198768057 - L2 LINE L2 -15 3298 3152 2173 123 0 0 chr2 54488526 54488827 -198767756 + AluSx SINE Alu 1 301 -11 512 304 36 36 chr2 54488827 54488906 -198767677 - L2 LINE L2 -160 3153 3075 354 338 27 77 chr2 54488876 54489098 -198767485 - L2 LINE L2 -3075 239 29 * 1833 64 0 0 chr2 54489424 54489707 -198766876 - L1P LINE L1 -728 5426 5144 5904 40 14 1 chr2 54489708 54490429 -198766154 + L1PA6 LINE L1 5420 6149 -5 672 114 38 13 chr2 54491699 54491857 -198764726 + (TCTA)n Simple_repeat Simple_repeat 1 162 0 1786 167 37 17 chr2 54492516 54492869 -198763714 - MER46B DNA MER2_type 0 236 2 283 298 70 23 chr2 54494381 54494552 -198762031 - L1ME4a LINE L1 -230 5891 5713 329 355 51 82 chr2 54494690 54495045 -198761538 - L2 LINE L2 0 3272 2929 1137 209 28 50 chr2 54545079 54545361 -198711222 + MLT1A1 LTR MaLR 84 359 -6 28 79 0 0 chr2 54545958 54546021 -198710562 + AT_rich Low_complexity Low_complexity 1 63 0 1746 110 8 0 chr2 54546133 54546370 -198710213 - AluSq SINE Alu -74 239 1 216 0 0 0 chr2 54546374 54546398 -198710185 + (TA)n Simple_repeat Simple_repeat 2 25 0 34 55 0 0 chr2 54546732 54546787 -198709796 + AT_rich Low_complexity Low_complexity 1 55 0 29 0 0 0 chr2 54546923 54546952 -198709631 + AT_rich Low_complexity Low_complexity 1 29 0 2167 189 13 15 chr2 54547052 54547449 -198709134 + MSTD LTR MaLR 1 396 0 460 219 46 13 chr2 54548095 54548246 -198708337 + L1MA6 LINE L1 6145 6300 0 * 2694 191 61 39 chr2 54548244 54548387 -198708196 - L1MB8 LINE L1 -140 6038 5900 2068 88 4 0 chr2 54548387 54548647 -198707936 - AluSc SINE Alu -13 296 36 2694 191 61 39 chr2 54548647 54549177 -198707406 - L1MB8 LINE L1 -278 5900 5350 189 322 22 33 chr2 54549177 54549267 -198707316 + L2 LINE L2 2996 3084 -188 2292 101 0 0 chr2 54550391 54550697 -198705886 - AluSq SINE Alu -7 306 1 285 281 42 10 chr2 54551136 54551232 -198705351 + MIR3 SINE MIR 100 198 -10 199 333 50 0 chr2 54551473 54551533 -198705050 - MIR SINE MIR -164 98 36 552 224 109 6 chr2 54551720 54551885 -198704698 - MER39 LTR ERV1 0 707 526 3758 143 11 20 chr2 54551893 54552241 -198704342 + MER41B LTR ERV1 1 342 -293 1953 143 40 15 chr2 54552241 54552569 -198704014 + MER1B DNA MER1_type 1 336 -1 3758 143 11 20 chr2 54552569 54552861 -198703722 + MER41B LTR ERV1 342 635 0 645 231 191 36 chr2 54552861 54553175 -198703408 - MER39 LTR ERV1 -206 501 4 2422 179 54 103 chr2 54554351 54555078 -198701505 + LTR8 LTR ERV1 1 691 0 24 53 0 0 chr2 54555089 54555127 -198701456 + AT_rich Low_complexity Low_complexity 1 38 0 2622 80 128 2 chr2 54555274 54555672 -198700911 + LTR7 LTR ERV1 1 448 -2 225 308 44 11 chr2 54555724 54555815 -198700768 + MIR3 SINE MIR 89 182 -26 180 0 0 0 chr2 54556241 54556261 -198700322 + (A)n Simple_repeat Simple_repeat 1 20 0 1109 235 132 31 chr2 54556776 54557223 -198699360 + Charlie4a DNA MER1_type 17 508 0 22 0 0 0 chr2 54558569 54558591 -198697992 + AT_rich Low_complexity Low_complexity 1 22 0 2570 123 5 0 chr2 54559727 54560100 -198696483 + THE1C LTR MaLR 1 375 0 9106 122 35 52 chr2 54560100 54561620 -198694963 + THE1C-int LTR MaLR 1 1494 -86 2321 209 17 27 chr2 54561804 54562343 -198694240 - LTR27 LTR ERV1 -132 504 3 625 77 0 11 chr2 54562343 54562434 -198694149 + THE1C-int LTR MaLR 1491 1580 0 2562 114 3 16 chr2 54562434 54562812 -198693771 + THE1C LTR MaLR 1 373 -2 1296 188 34 55 chr2 54562846 54563139 -198693444 - AluJb SINE Alu -25 287 1 26 0 0 0 chr2 54563208 54563234 -198693349 + AT_rich Low_complexity Low_complexity 1 26 0 280 350 104 35 chr2 54563382 54563671 -198692912 + L2 LINE L2 3005 3313 0 422 243 75 14 chr2 54563836 54563999 -198692584 - L1M LINE L1 -743 5403 5237 239 113 99 0 chr2 54563999 54564070 -198692513 + (TA)n Simple_repeat Simple_repeat 1 78 0 1360 244 30 16 chr2 54564080 54564506 -198692077 - L1ME LINE L1 -918 6023 5592 667 240 28 40 chr2 54564492 54564742 -198691841 - L1ME LINE L1 -2064 4877 4631 * 1150 286 124 7 chr2 54564743 54565707 -198690876 - L1ME LINE L1 -2395 4546 3442 408 275 68 49 chr2 54565714 54566002 -198690581 - L1ME LINE L1 -4895 1528 1302 2908 109 39 11 chr2 54566002 54566443 -198690140 + MLT2A2 LTR ERVL 1 453 0 408 275 68 49 chr2 54566443 54566582 -198690001 - L1ME LINE L1 -5121 1302 1167 456 62 0 0 chr2 54566739 54566803 -198689780 + (TC)n Simple_repeat Simple_repeat 1 64 0 833 193 28 4 chr2 54567493 54567688 -198688895 - L1MA4A LINE L1 -155 6148 5937 524 103 13 0 chr2 54567695 54567773 -198688810 - L1PA10 LINE L1 -5 6163 6085 22 0 0 0 chr2 54568110 54568132 -198688451 + AT_rich Low_complexity Low_complexity 1 22 0 229 356 0 59 chr2 54568230 54568348 -198688235 + L2 LINE L2 2946 3056 -216 1808 174 17 0 chr2 54568533 54568826 -198687757 - AluJb SINE Alu -14 298 1 21 0 0 0 chr2 54569540 54569561 -198687022 + AT_rich Low_complexity Low_complexity 1 21 0 1438 327 155 19 chr2 54570176 54571073 -198685510 + L2 LINE L2 2119 3127 -186 398 311 26 38 chr2 54571086 54571350 -198685233 + L2 LINE L2 3050 3310 -3 189 265 59 69 chr2 54572031 54572133 -198684450 + L2 LINE L2 3204 3304 -9 311 340 80 10 chr2 54572156 54572356 -198684227 - MIR SINE MIR -2 260 47 2023 108 0 47 chr2 54572772 54573105 -198683478 + AluSg SINE Alu 1 319 0 225 0 0 0 chr2 54573641 54573666 -198682917 + (T)n Simple_repeat Simple_repeat 1 25 0 1621 136 3 77 chr2 54573859 54574219 -198682364 - MER4A LTR ERV1 -16 648 257 517 120 65 11 chr2 54574216 54574308 -198682275 - MER4A LTR ERV1 -567 97 1 * 300 175 0 0 chr2 54574695 54574758 -198681825 + (TA)n Simple_repeat Simple_repeat 1 63 0 222 37 0 0 chr2 54574753 54574780 -198681803 + (CA)n Simple_repeat Simple_repeat 2 28 0 * 233 163 20 0 chr2 54575031 54575080 -198681503 + GA-rich Low_complexity Low_complexity 3 52 0 243 88 0 0 chr2 54575807 54575841 -198680742 + (CATA)n Simple_repeat Simple_repeat 3 36 0 203 152 22 0 chr2 54576306 54576352 -198680231 + GA-rich Low_complexity Low_complexity 4 50 0 182 314 58 66 chr2 54576838 54576959 -198679624 - L2 LINE L2 -38 3275 3156 388 337 85 61 chr2 54577470 54578130 -198678453 - L2 LINE L2 -168 3145 2460 681 97 21 0 chr2 54579516 54579609 -198676974 - MER4A LTR ERV1 -1 663 569 716 191 0 0 chr2 54579610 54579736 -198676847 + FRAM SINE Alu 42 167 -9 260 307 84 62 chr2 54579741 54579920 -198676663 + MIR SINE MIR 75 257 -5 378 297 27 34 chr2 54580076 54580224 -198676359 - MER5A DNA MER1_type 0 189 43 330 115 0 0 chr2 54580402 54580454 -198676129 + (CA)n Simple_repeat Simple_repeat 1 52 0 1235 277 82 21 chr2 54581484 54581921 -198674662 + LTR16B LTR ERVL 1 464 0 23 54 0 0 chr2 54581932 54581969 -198674614 + AT_rich Low_complexity Low_complexity 1 37 0 2827 3 0 0 chr2 54581999 54582302 -198674281 + AluYa5 SINE Alu 1 303 -8 205 319 0 103 chr2 54583257 54583373 -198673210 + MER5A DNA MER1_type 81 184 -5 2244 289 145 7 chr2 54583683 54584501 -198672082 + L2 LINE L2 1513 2481 -833 1823 66 0 13 chr2 54584501 54584727 -198671856 - AluSc SINE Alu -11 298 76 2244 289 145 7 chr2 54584727 54584858 -198671725 + L2 LINE L2 2481 2593 -721 2572 14 0 0 chr2 54584968 54585308 -198671275 - AluYa5 SINE Alu 0 340 1 335 296 84 15 chr2 54585321 54585524 -198671059 - L1M4 LINE L1 -1565 4581 4365 245 191 43 35 chr2 54585967 54586082 -198670501 + (TATAA)n Simple_repeat Simple_repeat 5 120 0 1641 248 78 44 chr2 54586118 54586851 -198669732 - L1ME3 LINE L1 -75 6087 5330 283 262 24 12 chr2 54586918 54587002 -198669581 + L2 LINE L2 3221 3305 -8 234 271 14 14 chr2 54587339 54587409 -198669174 - L1P3 LINE L1 -425 5747 5678 2761 87 19 3 chr2 54587426 54587795 -198668788 + THE1C LTR MaLR 1 375 0 10492 109 9 32 chr2 54587797 54589411 -198667172 + THE1C-int LTR MaLR 5 1580 0 2535 139 0 0 chr2 54589411 54589786 -198666797 + THE1C LTR MaLR 1 375 0 253 313 93 0 chr2 54589894 54590044 -198666539 - L1M1 LINE L1 -728 5575 5412 1426 238 60 17 chr2 54590262 54591631 -198664952 - L1MC/D LINE L1 -743 5337 4005 335 214 29 126 chr2 54591644 54591747 -198664836 - LTR8A LTR ERV1 0 727 635 227 321 32 16 chr2 54591772 54591959 -198664624 - L1MC/D LINE L1 -5329 741 552 390 299 97 58 chr2 54591998 54592429 -198664154 - L1MC/D LINE L1 -5590 480 33 328 252 84 42 chr2 54592597 54592740 -198663843 - L1M4 LINE L1 -1973 4173 4025 26 88 0 0 chr2 54592976 54593044 -198663539 + AT_rich Low_complexity Low_complexity 1 68 0 895 124 36 0 chr2 54593044 54593181 -198663402 - AluSg/x SINE Alu -12 298 157 294 139 39 5 chr2 54593182 54593246 -198663337 + MLT2B1 LTR ERVL 321 508 -12 2558 158 143 11 chr2 54594973 54595499 -198661084 - LTR49 LTR ERV1 0 595 1 2612 27 0 0 chr2 54596190 54596483 -198660100 + AluY SINE Alu 1 293 -18 219 320 155 20 chr2 54596616 54596816 -198659767 + L2 LINE L2 3082 3308 -5 1126 198 66 16 chr2 54597002 54597305 -198659278 - MER33 DNA MER1_type -6 318 1 2152 134 0 0 chr2 54597777 54598084 -198658499 - AluSg SINE Alu -3 307 1 249 330 94 28 chr2 54599051 54599157 -198657426 + L2 LINE L2 3149 3261 -11 378 288 73 57 chr2 54599510 54599687 -198656896 + MIR SINE MIR 18 197 -65 2065 136 120 31 chr2 54600304 54600695 -198655888 + LTR49 LTR ERV1 1 426 -169 1163 164 51 9 chr2 54600699 54600913 -198655670 + AluJb SINE Alu 86 308 -4 206 103 0 26 chr2 54600913 54600952 -198655631 + (GGGA)n Simple_repeat Simple_repeat 2 39 0 512 142 28 19 chr2 54600955 54601061 -198655522 + LTR48 LTR ERV1 619 725 -62 1492 186 0 66 chr2 54601728 54602061 -198654522 - AluJo SINE Alu -1 311 1 384 253 35 59 chr2 54602419 54602589 -198653994 + L1MC5 LINE L1 7749 7914 -47 26 64 0 0 chr2 54602827 54602874 -198653709 + AT_rich Low_complexity Low_complexity 1 47 0 385 256 17 52 chr2 54603260 54603432 -198653151 - L1M4 LINE L1 -2131 4015 3850 21 71 0 0 chr2 54603780 54603822 -198652761 + AT_rich Low_complexity Low_complexity 1 42 0 261 0 0 0 chr2 54603963 54603992 -198652591 + (CA)n Simple_repeat Simple_repeat 2 30 0 350 278 162 14 chr2 54604225 54604445 -198652138 + MIR SINE MIR 7 262 0 1936 164 0 6 chr2 54604940 54605252 -198651331 + AluJb SINE Alu 1 310 -2 307 352 0 0 chr2 54605638 54605726 -198650857 + L2 LINE L2 3148 3235 -37 521 314 147 5 chr2 54605752 54605956 -198650627 - MIR SINE MIR -27 235 3 27 29 0 0 chr2 54606088 54606122 -198650461 + AT_rich Low_complexity Low_complexity 1 34 0 1955 220 55 45 chr2 54606268 54606758 -198649825 + MLT1D LTR MaLR 1 495 -10 1451 202 45 11 chr2 54607100 54607264 -198649319 - AluJo SINE Alu -14 298 118 1943 139 7 14 chr2 54607264 54607559 -198649024 - AluJo SINE Alu -19 293 1 1451 202 45 11 chr2 54607559 54607681 -198648902 - AluJo SINE Alu -194 118 2 225 0 0 0 chr2 54607748 54607773 -198648810 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 2201 95 0 7 chr2 54607779 54608064 -198648519 - AluSc SINE Alu -26 283 1 22 0 0 0 chr2 54608064 54608086 -198648497 + AT_rich Low_complexity Low_complexity 1 22 0 1800 224 80 51 chr2 54608538 54609141 -198647442 - MLT1E3 LTR MaLR 0 624 5 646 197 0 7 chr2 54609279 54609426 -198647157 - L1MB8 LINE L1 0 6178 6033 3348 280 52 29 chr2 54609444 54611127 -198645456 + L1M2c LINE L1 3 1965 -4824 1600 185 0 21 chr2 54611127 54611449 -198645134 + AluJo SINE Alu 3 318 0 3348 280 52 29 chr2 54611449 54611480 -198645103 + L1M2c LINE L1 1965 1994 -4795 367 78 94 0 chr2 54611476 54611540 -198645043 + L1M2 LINE L1 4276 4345 -1801 * 4492 175 9 48 chr2 54611589 54611822 -198644761 + L1M2 LINE L1 4325 4565 -1735 2180 119 3 0 chr2 54611822 54612124 -198644459 + AluSg SINE Alu 1 303 -7 4492 175 9 48 chr2 54612124 54612303 -198644280 + L1M2 LINE L1 4565 4749 -1551 208 0 30 30 chr2 54612303 54612336 -198644247 + (CAA)n Simple_repeat Simple_repeat 1 33 0 4492 175 9 48 chr2 54612336 54613252 -198643331 + L1M2 LINE L1 4749 5607 -693 272 263 99 58 chr2 54614238 54614409 -198642174 - L2 LINE L2 -180 3092 2915 2356 104 3 0 chr2 54615154 54615463 -198641120 + AluSg SINE Alu 1 310 0 524 187 80 13 chr2 54616186 54616316 -198640267 - L1PB4 LINE L1 -4 6277 6034 348 323 113 44 chr2 54616331 54616675 -198639908 - L1MC/D LINE L1 -2174 5634 5267 10873 229 39 12 chr2 54616731 54619588 -198636995 - L1 LINE L1 -872 5274 2342 2858 208 69 100 chr2 54619589 54619744 -198636839 - L1PBb LINE L1 -4280 1923 1765 369 0 0 0 chr2 54619744 54619785 -198636798 + (TG)n Simple_repeat Simple_repeat 2 42 0 2858 208 69 100 chr2 54619785 54621073 -198635510 - L1PBb LINE L1 -4438 1765 434 22 35 0 0 chr2 54622223 54622252 -198634331 + AT_rich Low_complexity Low_complexity 1 29 0 215 200 0 0 chr2 54622273 54622308 -198634275 + (CA)n Simple_repeat Simple_repeat 1 35 0 267 255 50 71 chr2 54622383 54622524 -198634059 + L1MEd LINE L1 6 143 -5976 3696 177 30 10 chr2 54622736 54623425 -198633158 - MER44D DNA MER2_type -1 704 2 325 252 73 88 chr2 54623572 54623846 -198632737 + L1MEd LINE L1 562 831 -5288 347 268 57 37 chr2 54624077 54624369 -198632214 + L1MEd LINE L1 1137 1425 -4704 257 102 41 0 chr2 54624372 54624421 -198632162 + GA-rich Low_complexity Low_complexity 3 53 0 236 260 55 0 chr2 54624435 54624508 -198632075 + GA-rich Low_complexity Low_complexity 4 80 0 308 255 148 58 chr2 54624700 54624927 -198631656 + MLT1I LTR MaLR 73 284 -125 22 35 0 0 chr2 54625966 54625995 -198630588 + AT_rich Low_complexity Low_complexity 1 29 0 360 314 53 35 chr2 54626390 54626559 -198630024 - HAL1 LINE L1 -913 1594 1423 32 43 0 0 chr2 54626722 54626768 -198629815 + AT_rich Low_complexity Low_complexity 1 46 0 271 275 14 0 chr2 54628663 54628732 -198627851 + MER94 DNA DNA 3 72 -62 1202 204 0 30 chr2 54629261 54629496 -198627087 - AluJo SINE Alu -84 228 1 2302 107 0 0 chr2 54629690 54630000 -198626583 - AluSg SINE Alu 0 310 1 192 300 43 71 chr2 54630387 54630457 -198626126 + MER5A DNA MER1_type 34 101 -88 297 0 0 0 chr2 54631635 54631668 -198624915 + (TG)n Simple_repeat Simple_repeat 1 33 0 2322 120 25 8 chr2 54632622 54632990 -198623593 - THE1C LTR MaLR 0 375 2 4217 106 6 85 chr2 54632991 54633719 -198622864 - THE1C-int LTR MaLR 0 1580 911 2343 78 18 128 chr2 54633701 54634147 -198622436 - THE1C-int LTR MaLR -1183 397 1 * 1959 145 77 11 chr2 54634147 54634499 -198622084 - THE1C LTR MaLR 0 375 1 754 290 98 23 chr2 54634897 54635245 -198621338 + MLT1I LTR MaLR 3 376 -33 22 35 0 0 chr2 54635246 54635275 -198621308 + AT_rich Low_complexity Low_complexity 1 29 0 22 80 0 0 chr2 54635827 54635877 -198620706 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr2 54636411 54636432 -198620151 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 54636518 54636543 -198620040 + AT_rich Low_complexity Low_complexity 1 25 0 418 317 34 0 chr2 54636659 54636864 -198619719 - L1MEc LINE L1 -1455 5189 4978 2102 264 52 47 chr2 54636873 54637611 -198618972 - L1M4 LINE L1 -5787 755 15 362 235 142 97 chr2 54637634 54638120 -198618463 - L1MEc LINE L1 -1955 4689 4182 240 284 49 0 chr2 54638169 54638271 -198618312 - L1MEc LINE L1 -3612 3032 2926 848 187 0 0 chr2 54638277 54638416 -198618167 - AluJ SINE Alu -4 308 170 399 86 0 17 chr2 54638417 54638475 -198618108 - AluJ SINE Alu -193 109 53 3225 262 89 46 chr2 54638487 54640694 -198615889 - L1MEc LINE L1 -3874 2951 652 901 211 49 5 chr2 54640694 54640898 -198615685 + MER20 DNA MER1_type 1 213 -6 1537 233 80 110 chr2 54641391 54642355 -198614228 + LTR1B LTR ERV1 1 1020 0 299 278 130 9 chr2 54642815 54642923 -198613660 + MIR SINE MIR 15 135 -127 303 71 0 0 chr2 54643048 54643090 -198613493 + (CA)n Simple_repeat Simple_repeat 2 43 0 395 333 69 13 chr2 54644765 54644924 -198611659 - MIR SINE MIR -93 169 2 1375 203 44 17 chr2 54645060 54645468 -198611115 + Charlie1b DNA MER1_type 105 523 0 2272 49 7 7 chr2 54645562 54645849 -198610734 + AluY SINE Alu 1 287 -24 21 0 0 0 chr2 54646517 54646538 -198610045 + AT_rich Low_complexity Low_complexity 1 21 0 245 162 0 0 chr2 54647919 54647956 -198608627 + polypurine Low_complexity Low_complexity 3 39 0 483 200 13 25 chr2 54647956 54648345 -198608238 + GA-rich Low_complexity Low_complexity 1 384 0 26 0 0 0 chr2 54648681 54648707 -198607876 + AT_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr2 54649541 54649564 -198607019 + AT_rich Low_complexity Low_complexity 1 23 0 234 182 0 0 chr2 54649640 54649706 -198606877 + GA-rich Low_complexity Low_complexity 4 69 0 1148 237 190 20 chr2 54650284 54650836 -198605747 - L1MC4 LINE L1 -143 7899 7254 1342 232 69 35 chr2 54650848 54651253 -198605330 - L1MC4 LINE L1 -953 7089 6671 243 250 0 0 chr2 54651301 54651385 -198605198 + (TA)n Simple_repeat Simple_repeat 1 84 0 515 289 41 14 chr2 54651391 54651636 -198604947 - L1MC4 LINE L1 -1340 6702 6444 238 138 35 0 chr2 54652032 54652090 -198604493 + GA-rich Low_complexity Low_complexity 1 60 0 780 255 38 0 chr2 54652541 54652725 -198603858 + MIR SINE MIR 6 196 -66 363 292 6 42 chr2 54654474 54654642 -198601941 + LTR2 LTR ERV1 3 164 -285 * 965 196 0 0 chr2 54654634 54654818 -198601765 + LTR2 LTR ERV1 266 449 0 1973 160 35 13 chr2 54654818 54655192 -198601391 + Harlequin LTR ERV1 1 382 -6514 32114 161 16 12 chr2 54655275 54660045 -198596538 + Harlequin LTR ERV1 512 5315 -2498 203 0 0 36 chr2 54660045 54660073 -198596510 + (TA)n Simple_repeat Simple_repeat 1 27 0 32114 161 16 12 chr2 54660073 54661002 -198595581 + Harlequin LTR ERV1 5315 6238 -1575 345 123 0 0 chr2 54661000 54661057 -198595526 + Harlequin LTR ERV1 6839 6895 -1 * 384 278 6 43 chr2 54661061 54661223 -198595360 + LTR2 LTR ERV1 5 160 -289 * 941 169 5 5 chr2 54661219 54661403 -198595180 + LTR2 LTR ERV1 266 449 0 247 156 250 0 chr2 54661642 54661681 -198594902 + MADE1 DNA Mariner 1 29 -51 2320 86 0 0 chr2 54661681 54661973 -198594610 - AluY SINE Alu -18 293 2 247 156 250 0 chr2 54661973 54661997 -198594586 + MADE1 DNA Mariner 29 80 0 249 236 83 0 chr2 54662197 54662269 -198594314 - MLT1I LTR MaLR -226 183 106 21 0 0 0 chr2 54663115 54663136 -198593447 + AT_rich Low_complexity Low_complexity 1 21 0 2509 62 0 3 chr2 54663264 54663572 -198593011 - AluY SINE Alu -4 307 1 2097 195 32 50 chr2 54663690 54664213 -198592370 + MER67D LTR ERV1 1 514 0 39 22 0 0 chr2 54665812 54665858 -198590725 + AT_rich Low_complexity Low_complexity 1 46 0 796 154 0 29 chr2 54666152 54666288 -198590295 + FLAM_C SINE Alu 2 133 0 306 322 0 76 chr2 54666621 54666739 -198589844 - L2 LINE L2 -1 3271 3163 207 343 15 0 chr2 54667028 54667095 -198589488 - L2 LINE L2 0 3272 3205 1417 175 31 34 chr2 54667471 54667825 -198588758 - L1MB8 LINE L1 -5 6173 5821 692 205 0 0 chr2 54667833 54667960 -198588623 - AluSg/x SINE Alu -10 300 174 7167 251 51 18 chr2 54667961 54668583 -198588000 - L1MB8 LINE L1 -573 5611 5011 225 0 0 0 chr2 54668583 54668608 -198587975 + (TA)n Simple_repeat Simple_repeat 2 26 0 7167 251 51 18 chr2 54668608 54671311 -198585272 - L1MB8 LINE L1 -1173 5011 2160 2062 143 5 35 chr2 54671319 54671361 -198585222 - THE1B LTR MaLR 0 364 322 2383 82 0 0 chr2 54671361 54671665 -198584918 + AluY SINE Alu 1 304 -7 2062 143 5 35 chr2 54671665 54671992 -198584591 - THE1B LTR MaLR -42 322 6 312 260 39 19 chr2 54671995 54672099 -198584484 - L1MCb LINE L1 -4138 2607 2502 2322 49 0 3 chr2 54672288 54672574 -198584009 + AluY SINE Alu 1 285 -26 21 0 0 0 chr2 54673774 54673795 -198582788 + AT_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr2 54675449 54675485 -198581098 + AT_rich Low_complexity Low_complexity 1 36 0 4382 85 41 34 chr2 54676108 54676793 -198579790 - L1P3 LINE L1 -5193 1268 579 6521 59 42 0 chr2 54676793 54678161 -198578422 + L1PA7 LINE L1 4751 6154 0 192 167 33 83 chr2 54678250 54678310 -198578273 - MIR SINE MIR -38 224 168 318 248 31 85 chr2 54678420 54678549 -198578034 - L1MCb LINE L1 -4502 2062 1941 1273 141 17 47 chr2 54678549 54678682 -198577901 + MER101B LTR ERV1 1 126 -444 2784 123 17 7 chr2 54678682 54679104 -198577479 + MSTA LTR MaLR 1 426 -2 1273 141 17 47 chr2 54679104 54679204 -198577379 + MER101B LTR ERV1 126 227 -343 3694 226 63 41 chr2 54679451 54681273 -198575310 - L1MCb LINE L1 -4674 2071 30 294 279 0 0 chr2 54681348 54681409 -198575174 - L2 LINE L2 0 3272 3212 208 191 0 21 chr2 54681813 54681860 -198574723 + A-rich Low_complexity Low_complexity 2 47 0 181 355 145 14 chr2 54682029 54682167 -198574416 - MIR3 SINE MIR -31 177 22 208 202 67 169 chr2 54683383 54683472 -198573111 - MER5A DNA MER1_type -94 95 16 26 0 0 0 chr2 54683978 54684004 -198572579 + AT_rich Low_complexity Low_complexity 1 26 0 217 232 18 18 chr2 54684201 54684257 -198572326 + (TA)n Simple_repeat Simple_repeat 1 56 0 201 297 78 0 chr2 54684457 54684521 -198572062 + MIR SINE MIR 75 143 -65 304 276 147 9 chr2 54685518 54685634 -198570949 + L1MEd LINE L1 23 154 -5965 516 335 94 53 chr2 54685715 54686301 -198570282 + L1MEd LINE L1 447 1056 -5063 23355 59 2 0 chr2 54686482 54689585 -198566998 + L1P LINE L1 4 3111 -3035 2037 136 10 16 chr2 54689748 54689922 -198566661 - AluSx SINE Alu -5 307 134 2310 96 3 7 chr2 54689922 54690225 -198566358 - AluY SINE Alu -9 302 1 2037 136 10 16 chr2 54690225 54690359 -198566224 - AluSx SINE Alu -178 134 1 21 57 0 0 chr2 54691173 54691208 -198565375 + AT_rich Low_complexity Low_complexity 1 35 0 512 320 108 47 chr2 54691310 54691842 -198564741 - L1M4 LINE L1 -1696 4450 3867 240 35 0 0 chr2 54691842 54691871 -198564712 + (TA)n Simple_repeat Simple_repeat 1 29 0 512 320 108 47 chr2 54691871 54692013 -198564570 - L1M4 LINE L1 -2279 3867 3735 26 30 0 0 chr2 54692277 54692310 -198564273 + AT_rich Low_complexity Low_complexity 1 33 0 747 153 33 7 chr2 54692551 54692701 -198563882 - L1MB4 LINE L1 -2 6178 6025 361 320 180 28 chr2 54693922 54694393 -198562190 + L2 LINE L2 2753 3309 -4 1601 135 82 25 chr2 54694739 54695020 -198561563 + AluSx SINE Alu 1 297 -15 21 0 0 0 chr2 54695130 54695151 -198561432 + AT_rich Low_complexity Low_complexity 1 21 0 321 322 167 13 chr2 54695420 54695647 -198560936 - MIR SINE MIR 0 262 1 211 259 0 35 chr2 54696006 54696064 -198560519 + (CATA)n Simple_repeat Simple_repeat 4 59 0 357 292 86 21 chr2 54696898 54697121 -198559462 + LTR8 LTR ERV1 19 265 -462 913 226 128 64 chr2 54697194 54697601 -198558982 + LTR8A LTR ERV1 287 719 -8 545 288 36 63 chr2 54697602 54697950 -198558633 + MER21B LTR ERV1 1 388 -475 414 268 15 9 chr2 54697951 54698096 -198558487 + L1MB7 LINE L1 4183 4335 -1811 2239 77 3 3 chr2 54698193 54698480 -198558103 + AluSg SINE Alu 21 307 -3 1710 241 24 12 chr2 54698788 54699299 -198557284 + L1MD2 LINE L1 755 1271 -5138 3981 244 82 58 chr2 54699301 54701140 -198555443 + L1MD2 LINE L1 3711 5593 -813 2056 268 68 19 chr2 54701212 54701950 -198554633 + L1MD2 LINE L1 5846 6619 0 2438 124 8 89 chr2 54703963 54704447 -198552136 - MER65A LTR ERV1 0 445 1 3465 205 20 18 chr2 54704850 54705650 -198550933 + L1MB7 LINE L1 5227 6028 -156 1032 181 62 81 chr2 54705652 54705911 -198550672 - AluJo SINE Alu -49 263 10 631 136 57 36 chr2 54705935 54706075 -198550508 + L1MB8 LINE L1 6035 6177 -1 1294 195 143 31 chr2 54707119 54707701 -198548882 - LTR48 LTR ERV1 -52 735 1 386 289 188 18 chr2 54708542 54708760 -198547823 + MIR SINE MIR 8 262 0 228 227 43 129 chr2 54708897 54708928 -198547655 - L1MC4 LINE L1 -2 8040 8008 1552 176 77 20 chr2 54708928 54709280 -198547303 + THE1C LTR MaLR 4 375 0 9501 135 43 7 chr2 54709283 54710806 -198545777 + THE1C-int LTR MaLR 3 1580 0 1613 148 75 34 chr2 54710809 54711167 -198545416 + THE1C LTR MaLR 3 375 0 228 227 43 129 chr2 54711167 54711290 -198545293 - L1MC4 LINE L1 -38 8004 7892 224 246 14 0 chr2 54711293 54711362 -198545221 + (TA)n Simple_repeat Simple_repeat 1 70 0 565 257 59 30 chr2 54711397 54711599 -198544984 - L1MC4 LINE L1 -147 7895 7688 2245 94 3 0 chr2 54713127 54713434 -198543149 + AluY SINE Alu 1 308 -3 2048 250 124 24 chr2 54713588 54714353 -198542230 - L1MC4 LINE L1 -637 7405 6564 476 231 0 20 chr2 54714357 54714469 -198542114 + LTR48 LTR ERV1 1 110 -597 1986 197 92 34 chr2 54715511 54715670 -198540913 + LTR48 LTR ERV1 84 232 -555 1347 157 0 0 chr2 54715670 54715906 -198540677 + L1PB1 LINE L1 5915 6150 -1 1986 197 92 34 chr2 54715906 54716280 -198540303 + LTR48 LTR ERV1 232 648 -139 204 163 0 0 chr2 54717549 54717592 -198538991 + T-rich Low_complexity Low_complexity 1 43 0 23 0 0 0 chr2 54717717 54717740 -198538843 + AT_rich Low_complexity Low_complexity 1 23 0 973 181 19 15 chr2 54718664 54718869 -198537714 - L1MD1 LINE L1 0 6242 6037 27 0 0 0 chr2 54718874 54718901 -198537682 + AT_rich Low_complexity Low_complexity 1 27 0 2761 58 0 0 chr2 54718901 54719249 -198537334 - L1PA6 LINE L1 -11 6143 5796 295 268 42 0 chr2 54719467 54719538 -198537045 - MIR SINE MIR -71 191 118 189 276 103 11 chr2 54719913 54720000 -198536583 - MIR SINE MIR 0 262 168 1672 167 76 23 chr2 54720129 54720280 -198536303 - MLT1A1 LTR MaLR -1 364 222 2386 128 8 11 chr2 54720280 54720656 -198535927 + THE1C LTR MaLR 1 375 0 1672 167 76 23 chr2 54720656 54720846 -198535737 - MLT1A1 LTR MaLR -143 222 5 246 175 18 35 chr2 54721108 54721165 -198535418 - HsTC2 DNA Tc2 -612 1286 1231 * 392 233 25 42 chr2 54721159 54721279 -198535304 - HsTC2 DNA Tc2 -1771 127 10 454 189 270 0 chr2 54722019 54722167 -198534416 - MER53 DNA DNA 0 189 2 248 370 22 7 chr2 54722215 54722350 -198534233 + MLT1I LTR MaLR 99 235 -174 2255 107 16 8 chr2 54723037 54723403 -198533180 + L1MA2 LINE L1 5936 6304 0 487 267 31 25 chr2 54724220 54724381 -198532202 + ORSL DNA AcHobo 114 275 0 201 379 105 11 chr2 54725328 54725518 -198531065 - MIR SINE MIR -41 221 14 404 318 106 11 chr2 54725545 54725734 -198530849 + L2 LINE L2 2829 3035 -278 489 290 23 56 chr2 54725744 54725958 -198530625 - L2 LINE L2 -10 3303 3097 1656 135 0 4 chr2 54726782 54727019 -198529564 + AluSq SINE Alu 1 236 -77 203 284 0 15 chr2 54727851 54727918 -198528665 + L2 LINE L2 3244 3309 -4 219 36 0 0 chr2 54728126 54728154 -198528429 + (TTG)n Simple_repeat Simple_repeat 1 28 0 3432 194 91 0 chr2 54728169 54728884 -198527699 - L1PA8 LINE L1 -14 7596 6817 18788 186 12 9 chr2 54729106 54732918 -198523665 - L1PA8 LINE L1 -1521 6063 1451 1390 200 32 0 chr2 54734437 54734747 -198521836 + MER33 DNA MER1_type 1 320 -4 1971 130 10 0 chr2 54735288 54735580 -198521003 + AluSc SINE Alu 1 295 -14 295 292 31 21 chr2 54736131 54736227 -198520356 - MIR SINE MIR -64 144 48 6066 210 20 4 chr2 54737375 54738595 -198517988 + MSTA-int LTR MaLR 413 1651 0 1914 168 134 0 chr2 54738599 54738973 -198517610 + MSTA LTR MaLR 5 428 0 306 132 0 0 chr2 54739145 54739198 -198517385 + (GGGA)n Simple_repeat Simple_repeat 4 56 0 21 0 0 0 chr2 54740162 54740183 -198516400 + AT_rich Low_complexity Low_complexity 1 21 0 259 258 0 0 chr2 54740549 54740615 -198515968 + A-rich Low_complexity Low_complexity 1 66 0 268 216 0 0 chr2 54740790 54740841 -198515742 + HAL1 LINE L1 574 624 -1883 24 0 0 0 chr2 54741199 54741223 -198515360 + AT_rich Low_complexity Low_complexity 1 24 0 490 240 61 124 chr2 54741319 54741828 -198514755 + HAL1 LINE L1 2029 2505 -2 * 3944 193 39 20 chr2 54741817 54742647 -198513936 + L1MCa LINE L1 1 845 -5581 397 303 212 0 chr2 54743784 54743982 -198512601 - MIR SINE MIR -3 259 20 818 130 0 45 chr2 54743997 54744151 -198512432 - L1MB1 LINE L1 -1 6167 6021 292 220 0 0 chr2 54744813 54744872 -198511711 - MER6 DNA MER2_type -4 861 803 287 194 333 21 chr2 54744874 54744967 -198511616 + MER6 DNA MER2_type 17 859 -6 2622 39 3 0 chr2 54746085 54746392 -198510191 + AluY SINE Alu 1 308 -3 28 0 0 0 chr2 54747486 54747514 -198509069 + AT_rich Low_complexity Low_complexity 1 28 0 26 30 0 0 chr2 54747743 54747776 -198508807 + AT_rich Low_complexity Low_complexity 1 33 0 243 313 73 21 chr2 54747842 54747938 -198508645 + MIR SINE MIR 34 134 -74 338 278 106 35 chr2 54748256 54748483 -198508100 + MIR SINE MIR 20 262 0 810 162 0 34 chr2 54748565 54748713 -198507870 + FRAM SINE Alu 11 153 -23 195 300 86 0 chr2 54748820 54748890 -198507693 - L2 LINE L2 -9 3304 3229 406 314 81 17 chr2 54748917 54749153 -198507430 + MIR SINE MIR 11 261 -1 311 276 171 0 chr2 54749816 54749968 -198506615 - MER3 DNA MER1_type -30 179 2 198 118 0 0 chr2 54750783 54750817 -198505766 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 237 289 40 0 chr2 54750819 54750895 -198505688 - L2 LINE L2 -10 3303 3225 432 359 53 63 chr2 54751125 54751652 -198504931 - L2 LINE L2 -462 2852 2331 489 34 0 0 chr2 54751690 54751749 -198504834 + (TG)n Simple_repeat Simple_repeat 2 60 0 21 36 0 0 chr2 54751749 54751777 -198504806 + AT_rich Low_complexity Low_complexity 1 28 0 1464 302 35 16 chr2 54752671 54753178 -198503405 + L1MB1 LINE L1 1 517 -5624 422 165 25 58 chr2 54753200 54753321 -198503262 + L1MB1 LINE L1 3304 3420 -2790 4274 184 22 5 chr2 54753421 54754302 -198502281 + L1MB1 LINE L1 3761 4656 -1554 275 231 13 13 chr2 54754304 54754382 -198502201 + LTR48B LTR ERV1 7 84 -560 * 1512 231 71 13 chr2 54754372 54754779 -198501804 + MER39 LTR ERV1 130 688 -19 3597 183 30 54 chr2 54754793 54756155 -198500428 + L1MB1 LINE L1 4649 5977 -276 1841 196 11 11 chr2 54756155 54756517 -198500066 - MLT1A1 LTR MaLR -1 364 3 3597 183 30 54 chr2 54756517 54756759 -198499824 + L1MB1 LINE L1 5977 6223 -30 661 91 0 0 chr2 54756948 54757036 -198499547 + THE1C LTR MaLR 287 374 -1 322 320 70 17 chr2 54757212 54757384 -198499199 + MIR SINE MIR 1 181 -81 545 0 0 15 chr2 54757508 54757574 -198499009 + (TTTC)n Simple_repeat Simple_repeat 4 68 0 264 257 178 33 chr2 54758825 54759129 -198497454 + L1ME LINE L1 5506 5853 -268 234 0 0 0 chr2 54759178 54759204 -198497379 + (TA)n Simple_repeat Simple_repeat 1 26 0 25 51 0 0 chr2 54759266 54759305 -198497278 + AT_rich Low_complexity Low_complexity 1 39 0 798 178 86 0 chr2 54760404 54760578 -198496005 + MER53 DNA DNA 1 189 0 30 45 0 0 chr2 54761465 54761509 -198495074 + AT_rich Low_complexity Low_complexity 1 44 0 2339 197 239 73 chr2 54761923 54762797 -198493786 + LTR28 LTR ERV1 2 1020 0 990 121 0 6 chr2 54762923 54763088 -198493495 - L1MA6 LINE L1 0 6300 6137 1024 194 37 0 chr2 54763099 54763290 -198493293 + AluJo SINE Alu 97 294 -18 1260 169 27 83 chr2 54763290 54763628 -198492955 - L1MA6 LINE L1 -156 6144 5826 261 269 76 48 chr2 54763644 54763789 -198492794 - MER5A DNA MER1_type -3 186 38 417 283 124 75 chr2 54765045 54765826 -198490757 + L1MEd LINE L1 425 1243 -4876 180 77 0 0 chr2 54765837 54765863 -198490720 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 937 296 51 33 chr2 54766172 54766567 -198490016 - LTR16B LTR ERVL -13 451 50 5636 103 14 2 chr2 54766595 54767399 -198489184 + L1PA11 LINE L1 5362 6174 0 686 173 10 96 chr2 54767398 54767552 -198489031 - L1MC/D LINE L1 -2193 5592 5426 * 1497 172 28 69 chr2 54767552 54767753 -198488830 - AluJb SINE Alu -4 308 123 189 74 0 0 chr2 54767753 54767780 -198488803 + (TATG)n Simple_repeat Simple_repeat 2 28 0 1497 172 28 69 chr2 54767780 54767898 -198488685 - AluJb SINE Alu -189 123 2 686 173 10 96 chr2 54767898 54767912 -198488671 - L1MC/D LINE L1 -2359 5426 5442 2209 119 7 0 chr2 54767912 54768222 -198488361 - AluSx SINE Alu 0 312 1 686 173 10 96 chr2 54768222 54768260 -198488323 - L1MC/D LINE L1 -2342 5443 5403 728 218 116 112 chr2 54768273 54768503 -198488080 - L1MC/D LINE L1 -931 5215 4987 283 95 24 0 chr2 54768503 54768545 -198488038 + U2 snRNA snRNA 1 43 -145 728 218 116 112 chr2 54768545 54768791 -198487792 - L1MC/D LINE L1 -1159 4987 4696 23 0 0 0 chr2 54768872 54768895 -198487688 + AT_rich Low_complexity Low_complexity 1 23 0 410 237 110 8 chr2 54769414 54769532 -198487051 - MIR SINE MIR -17 245 116 694 170 143 24 chr2 54769923 54770307 -198486276 + LTR54B LTR ERV1 1 496 -2 1530 223 71 37 chr2 54770950 54771826 -198484757 + L1MD3 LINE L1 6805 7821 -174 6660 39 0 5 chr2 54772103 54772946 -198483637 - L1P LINE L1 -2197 3949 3111 7558 32 0 2 chr2 54772946 54774517 -198482066 + L1PA3 LINE L1 4588 6155 0 1314 208 123 52 chr2 54774770 54775289 -198481294 - MER34B LTR ERV1 -5 560 5 228 111 0 0 chr2 54775481 54775517 -198481066 + (CA)n Simple_repeat Simple_repeat 1 36 0 748 221 111 84 chr2 54775552 54775923 -198480660 - LTR37A LTR ERV1 0 426 46 210 247 0 96 chr2 54776034 54776107 -198480476 - L2 LINE L2 0 3313 3248 611 249 106 106 chr2 54776115 54776231 -198480352 - LTR40a LTR ERVL -1 518 403 2412 74 3 0 chr2 54776231 54776541 -198480042 - AluY SINE Alu 0 311 1 611 249 106 106 chr2 54776541 54776942 -198479641 - LTR40a LTR ERVL -115 404 1 30 0 0 0 chr2 54778174 54778204 -198478379 + AT_rich Low_complexity Low_complexity 1 30 0 2165 115 0 0 chr2 54778210 54778505 -198478078 + AluSc SINE Alu 1 295 -14 23 0 0 0 chr2 54778860 54778883 -198477700 + AT_rich Low_complexity Low_complexity 1 23 0 5669 214 18 15 chr2 54779531 54780697 -198475886 + L1M1 LINE L1 23 1192 -6373 6361 146 21 11 chr2 54780722 54782779 -198473804 - L1MA1 LINE L1 -6 6296 4220 1623 222 74 115 chr2 54782783 54783751 -198472832 + LTR1B LTR ERV1 8 1020 0 5083 235 44 6 chr2 54783751 54785268 -198471315 - L1M4 LINE L1 -1926 5639 4009 1992 149 0 7 chr2 54785268 54785569 -198471014 - AluSx SINE Alu -13 299 1 5083 235 44 6 chr2 54785569 54786159 -198470424 - L1M4 LINE L1 -3556 4009 3443 * 10998 149 26 11 chr2 54786150 54787987 -198468596 + L1M1 LINE L1 1172 3035 -4530 241 324 110 43 chr2 54788127 54788473 -198468110 - HAL1 LINE L1 -1550 957 589 2037 223 24 2 chr2 54788478 54788896 -198467687 - MSTB1 LTR MaLR 0 432 6 4794 163 26 25 chr2 54790031 54790385 -198466198 - L1PB3 LINE L1 -8 6146 5794 270 56 0 0 chr2 54790385 54790421 -198466162 + (TG)n Simple_repeat Simple_repeat 2 37 0 4794 163 26 25 chr2 54790421 54791118 -198465465 - L1PB3 LINE L1 -360 5794 5100 2809 177 12 5 chr2 54791122 54791686 -198464897 - L1PB3 LINE L1 -1168 4978 4411 2537 56 0 0 chr2 54791864 54792169 -198464414 + AluY SINE Alu 1 305 -6 2369 83 0 0 chr2 54794626 54794916 -198461667 - AluY SINE Alu -21 290 1 885 258 32 28 chr2 54795661 54795913 -198460670 + MIR SINE MIR 2 254 -8 29 28 0 0 chr2 54796420 54796456 -198460127 + AT_rich Low_complexity Low_complexity 1 36 0 2150 189 8 3 chr2 54796841 54797227 -198459356 - L1PB4 LINE L1 -1 6858 6471 12748 198 24 13 chr2 54797229 54801031 -198455552 - L1PA15 LINE L1 -21 7582 3744 3383 213 29 30 chr2 54803487 54803972 -198452611 - L1PA15 LINE L1 -4308 3276 2785 2415 83 0 0 chr2 54803972 54804272 -198452311 - AluSc SINE Alu -9 300 1 3383 213 29 30 chr2 54804272 54804718 -198451865 - L1PA15 LINE L1 -4799 2785 2340 12717 237 27 50 chr2 54804746 54811668 -198444915 - L1PB4 LINE L1 -373 6486 1 1766 106 0 4 chr2 54811704 54811941 -198444642 + AluYa5 SINE Alu 1 236 -75 2524 81 0 0 chr2 54811941 54812250 -198444333 + AluSq SINE Alu 4 313 0 1029 151 0 0 chr2 54812254 54812420 -198444163 + AluSg/x SINE Alu 127 292 -18 601 131 0 0 chr2 54812671 54812755 -198443828 - AluS SINE Alu -227 85 2 188 250 19 19 chr2 54812969 54813021 -198443562 + MIR SINE MIR 94 145 -63 234 0 0 0 chr2 54813505 54813531 -198443052 + (A)n Simple_repeat Simple_repeat 1 26 0 1302 185 0 4 chr2 54813643 54813870 -198442713 + AluY SINE Alu 10 235 -76 2034 148 0 0 chr2 54813870 54814180 -198442403 + AluSq SINE Alu 4 313 0 1189 121 0 0 chr2 54814184 54814350 -198442233 + AluSg/x SINE Alu 127 292 -18 564 194 0 151 chr2 54814694 54814880 -198441703 + L1PA15-16 LINE L1 1278 1435 -5414 1230 162 21 43 chr2 54814880 54815115 -198441468 - THE1B LTR MaLR -134 230 1 1780 148 62 31 chr2 54815343 54815700 -198440883 - THE1C LTR MaLR 0 375 8 1414 105 29 0 chr2 54866309 54866519 -198390064 - L1PA13 LINE L1 -3 6160 5945 11198 42 0 0 chr2 54867161 54868557 -198388026 + L1P LINE L1 1185 2580 -3566 1547 196 18 0 chr2 54869757 54870038 -198386545 + AluJo SINE Alu 1 286 -26 22179 99 8 14 chr2 54870837 54874191 -198382392 - L1PA8 LINE L1 0 6172 2852 2428 90 0 0 chr2 54874191 54874502 -198382081 - AluY SINE Alu 0 311 1 22179 99 8 14 chr2 54874502 54875378 -198381205 - L1PA8 LINE L1 -3320 2852 1972 227 170 0 19 chr2 54875699 54875752 -198380831 + GA-rich Low_complexity Low_complexity 3 54 0 217 352 68 0 chr2 54876454 54876542 -198380041 + MIR SINE MIR 55 148 -60 21 71 0 0 chr2 54876557 54876599 -198379984 + AT_rich Low_complexity Low_complexity 1 42 0 1500 234 16 32 chr2 54878838 54879218 -198377365 + MLT1A2 LTR MaLR 1 374 0 543 324 88 0 chr2 54879751 54879967 -198376616 + MIR SINE MIR 28 262 0 408 293 37 52 chr2 54879909 54880100 -198376483 - MIR SINE MIR -27 235 48 * 2270 87 10 0 chr2 54881734 54882032 -198374551 + AluSq SINE Alu 1 301 -12 233 369 12 71 chr2 54883079 54883247 -198373336 - MIR3 SINE MIR -14 194 37 26 0 0 0 chr2 54883334 54883360 -198373223 + AT_rich Low_complexity Low_complexity 1 26 0 28 61 0 0 chr2 54884141 54884190 -198372393 + AT_rich Low_complexity Low_complexity 1 49 0 24 77 0 0 chr2 54884234 54884286 -198372297 + AT_rich Low_complexity Low_complexity 1 52 0 22 56 0 0 chr2 54884480 54884516 -198372067 + AT_rich Low_complexity Low_complexity 1 36 0 2066 174 77 34 chr2 54884889 54885331 -198371252 - LOR1b LTR ERV1 0 461 1 22 35 0 0 chr2 54885465 54885494 -198371089 + AT_rich Low_complexity Low_complexity 1 29 0 456 296 87 0 chr2 54885501 54885673 -198370910 + L1M4 LINE L1 5450 5636 -538 425 115 0 26 chr2 54885698 54885776 -198370807 + L1MB8 LINE L1 6103 6178 0 2221 104 0 10 chr2 54886598 54886907 -198369676 + AluSx SINE Alu 1 306 -6 273 270 67 22 chr2 54887031 54887120 -198369463 + MIR SINE MIR 68 160 -102 1917 188 14 59 chr2 54888283 54888772 -198367811 - L1MB8 LINE L1 -1 6177 5711 * 6622 137 28 18 chr2 54888753 54890172 -198366411 - L1MA3 LINE L1 0 6305 4874 231 306 194 44 chr2 54890176 54890356 -198366227 - MIR SINE MIR -48 214 8 311 327 62 4 chr2 54890362 54890588 -198365995 + L1ME LINE L1 5597 5835 -286 2257 105 0 3 chr2 54891680 54891993 -198364590 - AluSq SINE Alu -1 312 1 2585 39 0 13 chr2 54892064 54892375 -198364208 - AluY SINE Alu -4 307 1 746 278 72 19 chr2 54892375 54892695 -198363888 + MER46C DNA MER2_type 2 338 0 583 291 153 34 chr2 54892718 54893247 -198363336 - L1ME4a LINE L1 -52 6069 5478 334 285 63 25 chr2 54893843 54894001 -198362582 + MIR SINE MIR 93 256 -6 441 289 63 0 chr2 54894162 54894304 -198362279 + MIR SINE MIR 105 255 -7 27 49 0 0 chr2 54894648 54894689 -198361894 + AT_rich Low_complexity Low_complexity 1 41 0 1677 190 63 40 chr2 54895549 54895996 -198360587 + LTR2B LTR ERV1 34 490 0 2077 91 84 101 chr2 54897154 54897559 -198359024 + MER48 LTR ERV1 1 398 0 2023 216 114 80 chr2 54898353 54899151 -198357432 + LTR1B LTR ERV1 2 826 0 250 388 41 54 chr2 54900990 54901284 -198355299 + L2 LINE L2 2894 3183 -89 22 35 0 0 chr2 54902220 54902249 -198354334 + AT_rich Low_complexity Low_complexity 1 29 0 198 103 0 0 chr2 54902572 54902601 -198353982 + (GA)n Simple_repeat Simple_repeat 2 30 0 401 190 84 56 chr2 54902761 54902788 -198353795 + MLT1B LTR MaLR 11 36 -354 315 0 0 0 chr2 54902788 54902823 -198353760 + (TG)n Simple_repeat Simple_repeat 1 35 0 401 190 84 56 chr2 54902823 54902937 -198353646 + MLT1B LTR MaLR 36 156 -234 2051 189 39 92 chr2 54902939 54903438 -198353145 + MLT2B1 LTR ERVL 1 470 -50 306 87 0 0 chr2 54903438 54903484 -198353099 + (TCTA)n Simple_repeat Simple_repeat 3 48 0 2051 189 39 92 chr2 54903484 54903528 -198353055 + MLT2B1 LTR ERVL 470 515 -5 355 134 28 70 chr2 54903584 54903730 -198352853 + MLT1A2 LTR MaLR 132 359 -15 444 355 59 41 chr2 54903803 54904195 -198352388 - L2 LINE L2 0 3313 2915 372 322 8 8 chr2 54906342 54906460 -198350123 - MIR SINE MIR -87 175 58 186 43 0 0 chr2 54907054 54907077 -198349506 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 25 0 0 0 chr2 54907856 54907881 -198348702 + AT_rich Low_complexity Low_complexity 1 25 0 240 228 50 20 chr2 54907963 54908064 -198348519 + L1MDa LINE L1 2192 2295 -4245 1595 253 115 42 chr2 54908432 54909737 -198346846 + L1MDa LINE L1 1002 2401 -4139 290 244 82 37 chr2 54909836 54909971 -198346612 + L1ME1 LINE L1 6021 6161 -5 27 0 0 0 chr2 54910353 54910380 -198346203 + AT_rich Low_complexity Low_complexity 1 27 0 2435 81 3 0 chr2 54910876 54911186 -198345397 - AluY SINE Alu 0 311 1 21 0 0 0 chr2 54911774 54911795 -198344788 + AT_rich Low_complexity Low_complexity 1 21 0 1928 120 0 14 chr2 54912104 54912408 -198344175 - AluSx SINE Alu 0 302 3 2092 94 0 45 chr2 54913732 54914040 -198342543 - AluY SINE Alu -17 294 1 1059 79 0 0 chr2 54914040 54914167 -198342416 - AluSq/x SINE Alu -176 137 11 229 176 39 0 chr2 54914246 54914297 -198342286 + T-rich Low_complexity Low_complexity 3 55 0 522 258 120 0 chr2 54914428 54914595 -198341988 + MER5A DNA MER1_type 2 188 -1 269 270 113 9 chr2 54914638 54914753 -198341830 - MER58A DNA MER1_type -55 169 43 2071 128 3 34 chr2 54914852 54915038 -198341545 - AluSq SINE Alu -2 311 138 2445 63 0 3 chr2 54915038 54915338 -198341245 - AluY SINE Alu 0 311 13 2071 128 3 34 chr2 54915338 54915472 -198341111 - AluSq SINE Alu -175 138 1 2814 263 62 23 chr2 54916788 54918213 -198338370 - L1M4 LINE L1 -769 5377 3897 378 337 41 0 chr2 54918581 54918753 -198337830 + L1ME4a LINE L1 5942 6120 -1 2160 144 14 22 chr2 54918934 54919301 -198337282 + THE1B LTR MaLR 1 364 0 552 346 122 28 chr2 54919625 54919768 -198336815 - L2 LINE L2 0 3313 3185 2170 137 0 0 chr2 54919768 54920074 -198336509 + AluSx SINE Alu 1 306 -6 552 346 122 28 chr2 54920074 54920363 -198336220 - L2 LINE L2 -128 3185 2840 189 274 26 68 chr2 54920666 54920783 -198335800 + MIR SINE MIR 95 206 -56 1588 213 64 64 chr2 54920948 54921450 -198335133 - MLT1D LTR MaLR -3 502 1 2085 71 11 0 chr2 54921719 54921999 -198334584 + MLT2A1 LTR ERVL 1 283 -161 313 26 0 0 chr2 54922002 54922041 -198334542 + MLT2A1 LTR ERVL 405 443 -1 194 313 30 61 chr2 54922715 54922814 -198333769 - L2 LINE L2 -309 2963 2868 6603 143 48 13 chr2 54923070 54924257 -198332326 + Tigger3b DNA MER2_type 1 1229 -2 21 0 0 0 chr2 54924969 54924990 -198331593 + AT_rich Low_complexity Low_complexity 1 21 0 405 39 0 0 chr2 54925077 54925128 -198331455 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 210 250 54 80 chr2 54925172 54925284 -198331299 - MIR SINE MIR -78 184 76 398 312 51 0 chr2 54925396 54925534 -198331049 + MIR SINE MIR 106 250 -12 465 310 118 57 chr2 54925547 54925791 -198330792 - MLT1G1 LTR MaLR -8 587 359 3323 35 5 0 chr2 54925791 54926192 -198330391 - L1PA3 LINE L1 0 6155 5753 465 310 118 57 chr2 54926192 54926459 -198330124 - MLT1G1 LTR MaLR -236 359 1 1327 232 54 67 chr2 54926518 54926983 -198329600 - MLT1C LTR MaLR 0 467 9 531 0 0 0 chr2 54927086 54927145 -198329438 + (TTATA)n Simple_repeat Simple_repeat 5 63 0 2035 200 38 48 chr2 54927251 54927725 -198328858 + MER70A LTR ERVL 3 471 -1 928 266 8 27 chr2 54928980 54929236 -198327347 - MIR SINE MIR 0 262 12 1682 154 31 74 chr2 54930463 54930853 -198325730 - THE1C LTR MaLR -2 373 1 8881 139 47 36 chr2 54930853 54932417 -198324166 - THE1C-int LTR MaLR 0 1580 1 1226 178 59 68 chr2 54932417 54932755 -198323828 - THE1C LTR MaLR 0 375 41 3272 101 20 0 chr2 54932755 54933199 -198323384 - MLT2A2 LTR ERVL 0 453 1 40499 83 11 8 chr2 54933199 54938832 -198317751 - HERVL-A2 LTR ERVL 0 5654 1 295 78 78 0 chr2 54938832 54938883 -198317700 - MLT2A2 LTR ERVL 0 444 390 330 87 0 0 chr2 54938900 54938946 -198317637 + (TA)n Simple_repeat Simple_repeat 1 46 0 2598 96 24 0 chr2 54938948 54939323 -198317260 - MLT2A2 LTR ERVL -69 384 1 382 22 0 0 chr2 54939323 54939368 -198317215 - THE1C LTR MaLR -330 45 1 1499 243 49 20 chr2 54939946 54940436 -198316147 - MLT1D LTR MaLR 0 505 2 306 115 0 0 chr2 54940981 54941033 -198315550 + (CA)n Simple_repeat Simple_repeat 2 53 0 25 0 0 0 chr2 54941126 54941151 -198315432 + AT_rich Low_complexity Low_complexity 1 25 0 1599 245 44 53 chr2 54941775 54942321 -198314262 - MER77 LTR ERV1 -9 596 56 341 302 78 11 chr2 54942963 54943142 -198313441 + L1MC4a LINE L1 6663 6853 -955 684 266 17 0 chr2 54943171 54943348 -198313235 + MER8 DNA MER2_type 16 195 -44 257 210 309 0 chr2 54943349 54943430 -198313153 + MER8 DNA MER2_type 134 239 0 846 237 11 56 chr2 54943460 54943835 -198312748 + L1MC5 LINE L1 6878 7235 -726 361 135 0 14 chr2 54943866 54943940 -198312643 - MER33 DNA MER1_type -1 323 251 360 275 17 25 chr2 54943942 54944062 -198312521 - MER33 DNA MER1_type -203 121 3 445 272 57 87 chr2 54944066 54944288 -198312295 + L1MC5 LINE L1 7246 7473 -488 2254 92 0 20 chr2 54944288 54944582 -198312001 + AluSg SINE Alu 10 297 -13 486 49 0 0 chr2 54944582 54944643 -198311940 + (GA)n Simple_repeat Simple_repeat 2 62 0 445 272 57 87 chr2 54944643 54944717 -198311866 + L1MC5 LINE L1 7471 7534 -427 318 281 178 0 chr2 54944731 54944866 -198311717 + L1ME1 LINE L1 44 202 -6194 4006 236 51 33 chr2 54944874 54946833 -198309750 + L1ME1 LINE L1 3322 5352 -883 2309 79 0 0 chr2 54946833 54947143 -198309440 + AluY SINE Alu 1 310 0 4006 236 51 33 chr2 54947143 54948044 -198308539 + L1ME1 LINE L1 5352 6235 0 303 304 37 75 chr2 54948119 54948280 -198308303 + L1ME2 LINE L1 5961 6115 -49 1264 185 8 33 chr2 54948284 54948527 -198308056 + MSTB LTR MaLR 3 239 -187 1694 169 58 28 chr2 54948942 54949304 -198307279 - THE1C LTR MaLR 0 375 3 5608 143 69 8 chr2 54949355 54950268 -198306315 - THE1C-int LTR MaLR -610 970 2 2033 153 47 6 chr2 54950269 54950629 -198305954 - THE1C LTR MaLR 0 375 1 285 338 60 40 chr2 54951308 54951459 -198305124 + MLT1J LTR MaLR 104 257 -254 903 250 4 22 chr2 54954613 54954841 -198301742 - MER58A DNA MER1_type 0 224 1 1532 184 69 149 chr2 54955431 54955981 -198300602 - MER67D LTR ERV1 -4 510 5 211 328 102 8 chr2 54956130 54956258 -198300325 - MIR SINE MIR -74 188 49 944 163 45 63 chr2 54956440 54956661 -198299922 - MER20 DNA MER1_type -2 217 1 180 0 0 0 chr2 54957003 54957023 -198299560 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 1293 187 76 46 chr2 54958438 54958807 -198297776 - LTR37A LTR ERV1 -29 397 18 455 326 65 65 chr2 54959170 54959630 -198296953 + MLT1L LTR MaLR 144 603 -12 272 120 20 0 chr2 54959744 54959794 -198296789 + CT-rich Low_complexity Low_complexity 2 52 0 252 331 91 20 chr2 54959902 54960156 -198296427 - L1ME LINE L1 -289 5832 5561 1387 210 24 14 chr2 54961666 54961957 -198294626 - MER67D LTR ERV1 -219 295 2 187 309 0 18 chr2 54962449 54962504 -198294079 - L2 LINE L2 -6 3307 3254 722 261 6 0 chr2 54962829 54962986 -198293597 - MLT1A2 LTR MaLR -2 372 215 222 37 0 0 chr2 54963008 54963035 -198293548 + (GA)n Simple_repeat Simple_repeat 1 27 0 11642 199 45 41 chr2 54963142 54963564 -198293019 + L1MA4A LINE L1 2 421 -6584 951 113 0 60 chr2 54963564 54963715 -198292868 - AluSg/x SINE Alu -68 242 101 11642 199 45 41 chr2 54963715 54968270 -198288313 + L1MA4A LINE L1 421 6474 -531 852 241 37 0 chr2 54968266 54968507 -198288076 + L1PB3 LINE L1 4257 4506 -1640 * 5453 145 41 4 chr2 54968500 54969759 -198286824 + L1PB3 LINE L1 4849 6151 -3 2680 154 21 9 chr2 54969763 54970297 -198286286 + L1MA4A LINE L1 6464 7003 -2 26 0 0 0 chr2 54970662 54970688 -198285895 + AT_rich Low_complexity Low_complexity 1 26 0 187 53 26 26 chr2 54970695 54970733 -198285850 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 917 189 0 0 chr2 54970748 54970891 -198285692 - FRAM SINE Alu -36 140 1 192 163 0 0 chr2 54971160 54971203 -198285380 + CT-rich Low_complexity Low_complexity 2 44 0 510 184 105 40 chr2 54971674 54971826 -198284757 + MLT1H LTR MaLR 7 168 -381 1152 115 29 24 chr2 54971826 54972035 -198284548 - L1P LINE L1 -913 5233 5024 234 322 135 43 chr2 54972322 54972552 -198284031 + MIR SINE MIR 11 261 -1 603 136 40 34 chr2 54973419 54973570 -198283013 + CT-rich Low_complexity Low_complexity 1 155 -23 1864 149 30 0 chr2 54973570 54973871 -198282712 - AluSx SINE Alu -2 310 1 603 136 40 34 chr2 54973871 54973896 -198282687 + CT-rich Low_complexity Low_complexity 155 178 0 180 244 0 0 chr2 54975632 54975673 -198280910 + MIR SINE MIR 114 154 -108 475 154 7 44 chr2 54976224 54976360 -198280223 + GA-rich Low_complexity Low_complexity 2 132 0 182 375 18 0 chr2 54977339 54977395 -198279188 - MIR SINE MIR -136 72 16 1591 223 34 25 chr2 54977583 54978019 -198278564 + L1MA7 LINE L1 5852 6291 0 420 300 139 0 chr2 54978655 54978878 -198277705 - HAL1 LINE L1 -634 1873 1620 713 296 89 41 chr2 54978980 54979463 -198277120 - HAL1 LINE L1 -1341 1166 661 616 282 108 5 chr2 54979469 54979682 -198276901 - MIR SINE MIR 0 262 28 820 310 114 38 chr2 54979738 54980189 -198276394 - HAL1 LINE L1 -1910 597 95 2308 95 3 0 chr2 54980189 54980493 -198276090 - AluSq SINE Alu -8 305 1 820 310 114 38 chr2 54980493 54980593 -198275990 - HAL1 LINE L1 -2412 95 4 902 203 27 5 chr2 54980846 54981033 -198275550 + MER20 DNA MER1_type 17 207 -12 521 251 167 8 chr2 54982552 54982714 -198273869 + MIR SINE MIR 3 188 -74 823 180 85 15 chr2 54983130 54983330 -198273253 + ORSL DNA AcHobo 62 275 0 631 236 42 12 chr2 54983330 54983495 -198273088 - MLT1G1 LTR MaLR -423 172 3 183 139 0 0 chr2 54984032 54984068 -198272515 + (TC)n Simple_repeat Simple_repeat 1 36 0 752 285 68 40 chr2 54984781 54985030 -198271553 - MIR SINE MIR -1 261 6 1832 155 35 92 chr2 54985281 54985739 -198270844 - MSTB1 LTR MaLR 0 432 1 1094 99 0 0 chr2 54986663 54986815 -198269768 - AluSg/x SINE Alu 0 312 161 953 258 84 30 chr2 54987127 54987461 -198269122 + MER74A LTR ERVL 11 362 -196 2600 113 3 3 chr2 54987957 54988321 -198268262 - THE1B LTR MaLR 0 364 1 24 0 0 0 chr2 54988374 54988398 -198268185 + AT_rich Low_complexity Low_complexity 1 24 0 22 70 0 0 chr2 54991236 54991279 -198265304 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr2 54991328 54991349 -198265234 + AT_rich Low_complexity Low_complexity 1 21 0 449 236 108 19 chr2 54991592 54991749 -198264834 + L2 LINE L2 3138 3308 -5 648 232 32 12 chr2 54992636 54992800 -198263783 - MLT1E LTR MaLR -386 181 12 279 320 136 11 chr2 54993327 54993478 -198263105 - MIR SINE MIR -26 182 13 202 232 58 43 chr2 54993668 54993737 -198262846 - MIR SINE MIR -115 147 78 430 301 69 6 chr2 54995260 54995433 -198261150 + MIR SINE MIR 63 246 -16 2194 130 0 0 chr2 54995443 54995744 -198260839 - AluSx SINE Alu -11 301 1 357 317 25 25 chr2 54996420 54996540 -198260043 + MIR3 SINE MIR 61 180 -28 10056 30 0 0 chr2 54997089 54999054 -198257529 + L1PA3 LINE L1 4190 6154 -1 3346 30 0 0 chr2 54999054 54999086 -198257497 + L1P LINE L1 4190 6186 -743 256 341 40 16 chr2 54999400 54999526 -198257057 + MIR SINE MIR 21 149 -113 220 296 49 49 chr2 55000317 55000398 -198256185 - MER5B DNA MER1_type -96 82 2 231 256 0 51 chr2 55001098 55001176 -198255407 + HAL1 LINE L1 799 872 -1635 499 278 146 34 chr2 55001500 55001849 -198254734 + HAL1 LINE L1 1230 1617 -890 294 268 177 67 chr2 55001901 55002337 -198254246 + HAL1 LINE L1 1814 2297 -210 1774 229 56 67 chr2 55002775 55002942 -198253641 - L1MC4a LINE L1 -3 7805 7638 3466 183 6 42 chr2 55002942 55003221 -198253362 + LTR51 LTR ERV1 1 289 -382 1781 159 17 14 chr2 55003221 55003383 -198253200 - AluSx SINE Alu -16 296 131 2044 115 43 0 chr2 55003383 55003662 -198252921 - AluSg SINE Alu -19 291 1 1781 159 17 14 chr2 55003662 55003794 -198252789 - AluSx SINE Alu -181 131 1 3466 183 6 42 chr2 55003794 55004210 -198252373 + LTR51 LTR ERV1 289 671 0 1774 229 56 67 chr2 55004210 55004653 -198251930 - L1MC4a LINE L1 -170 7638 7202 180 0 0 0 chr2 55006247 55006267 -198250316 + (TTG)n Simple_repeat Simple_repeat 2 21 0 21 0 0 0 chr2 55006796 55006817 -198249766 + AT_rich Low_complexity Low_complexity 1 21 0 260 254 0 17 chr2 55007096 55007155 -198249428 + MIR SINE MIR 89 146 -62 194 290 94 78 chr2 55007488 55007733 -198248850 + L2 LINE L2 2816 3064 -208 191 427 19 0 chr2 55007996 55008099 -198248484 + L2 LINE L2 3143 3247 -25 617 261 82 29 chr2 55009548 55009755 -198246828 + MIR SINE MIR 21 238 -24 359 325 175 21 chr2 55010036 55010230 -198246353 - MIR SINE MIR -6 256 33 320 303 49 19 chr2 55010383 55010684 -198245899 - L1MEd LINE L1 -4910 1209 1031 334 260 202 6 chr2 55010685 55010834 -198245749 - MER5A DNA MER1_type -1 188 6 256 269 57 43 chr2 55010840 55010981 -198245602 - L1MEd LINE L1 -5082 1037 895 5034 130 14 8 chr2 55010994 55011842 -198244741 - L1PA16 LINE L1 -104 6062 5211 670 107 58 0 chr2 55012270 55012373 -198244210 - HSMAR2 DNA Mariner -55 1247 1139 1687 5 0 0 chr2 55013038 55013222 -198243361 - AluYa5 SINE Alu -2 309 126 28 0 0 0 chr2 55013486 55013514 -198243069 + AT_rich Low_complexity Low_complexity 1 28 0 2953 20 17 3 chr2 55013541 55013892 -198242691 - L1PA4 LINE L1 -2 6153 5798 189 0 0 0 chr2 55014661 55014682 -198241901 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 200 360 45 11 chr2 55014742 55014831 -198241752 - MER5A DNA MER1_type -28 161 70 235 358 84 0 chr2 55015572 55015667 -198240916 + MIR3 SINE MIR 89 191 -17 1390 264 47 27 chr2 55015735 55016185 -198240398 - MER74B LTR ERVL -74 548 90 607 318 38 50 chr2 55018040 55018301 -198238282 - MIR SINE MIR -4 258 1 567 308 97 0 chr2 55020203 55020398 -198236185 - MIR SINE MIR -33 229 16 478 298 15 0 chr2 55020398 55020529 -198236054 + MER94 DNA DNA 2 134 0 843 210 37 23 chr2 55021748 55021962 -198234621 + L1M4 LINE L1 302 518 -5762 2174 238 99 6 chr2 55022276 55023127 -198233456 + L1M4 LINE L1 2307 3221 -3161 2191 146 40 3 chr2 55027307 55027656 -198228927 + THE1B LTR MaLR 1 362 -2 9861 132 7 42 chr2 55027658 55029295 -198227288 + THE1B-int LTR MaLR 1 1579 -1 2368 138 8 3 chr2 55029295 55029657 -198226926 + THE1B LTR MaLR 1 364 0 27 49 0 0 chr2 55030757 55030798 -198225785 + AT_rich Low_complexity Low_complexity 1 41 0 181 320 94 62 chr2 55030925 55031053 -198225530 + MIR SINE MIR 7 138 -124 1575 158 146 44 chr2 55031058 55031443 -198225140 + MSTA LTR MaLR 5 428 0 1242 209 97 31 chr2 55031739 55032059 -198224524 - MER2 DNA MER2_type 0 344 4 981 271 67 55 chr2 55032630 55033125 -198223458 + MLT1D LTR MaLR 5 505 0 2609 92 5 3 chr2 55034032 55034401 -198222182 - L1PA13 LINE L1 -12 6151 5782 228 154 31 46 chr2 55034401 55034466 -198222117 + (TA)n Simple_repeat Simple_repeat 1 64 0 235 219 0 14 chr2 55034471 55034544 -198222039 + LTR66 LTR ERVL 377 448 -162 3412 94 14 10 chr2 55034544 55035053 -198221530 - L1P4 LINE L1 -395 5768 5258 285 29 0 0 chr2 55035193 55035227 -198221356 + (CA)n Simple_repeat Simple_repeat 2 35 0 689 313 96 37 chr2 55035404 55036009 -198220574 + L2 LINE L2 2670 3312 -1 212 0 36 0 chr2 55036280 55036308 -198220275 + (TTA)n Simple_repeat Simple_repeat 1 29 0 2114 97 10 3 chr2 55039674 55039964 -198216619 + AluSx SINE Alu 1 292 -20 44 75 0 0 chr2 55040263 55040356 -198216227 + AT_rich Low_complexity Low_complexity 1 93 0 222 350 115 38 chr2 55041696 55041853 -198214730 - L2 LINE L2 -2 3270 3102 25 51 0 0 chr2 55042108 55042147 -198214436 + AT_rich Low_complexity Low_complexity 1 39 0 7203 44 6 0 chr2 55042569 55043659 -198212924 + L1PA4 LINE L1 5054 6148 -7 24 0 0 0 chr2 55043659 55043683 -198212900 + AT_rich Low_complexity Low_complexity 1 24 0 772 274 43 35 chr2 55044041 55044271 -198212312 + MIR SINE MIR 3 234 -28 594 363 51 27 chr2 55044305 55044371 -198212212 + ERVL LTR ERVL 3355 3418 -2346 1775 115 112 19 chr2 55044371 55044421 -198212162 - MER61A LTR ERV1 0 343 299 1884 161 0 0 chr2 55044421 55044700 -198211883 + AluSq SINE Alu 7 285 -28 1775 115 112 19 chr2 55044700 55044963 -198211620 - MER61A LTR ERV1 -44 299 1 594 363 51 27 chr2 55044963 55045271 -198211312 + ERVL LTR ERVL 3418 3738 -2026 306 302 48 42 chr2 55045302 55045491 -198211092 + ERVL LTR ERVL 3872 4061 -1593 733 335 88 7 chr2 55045771 55046078 -198210505 + ERVL LTR ERVL 4384 4715 -1049 536 250 21 7 chr2 55046285 55046429 -198210154 + MER103 DNA DNA 20 165 -1 422 133 27 13 chr2 55046606 55046681 -198209902 + AluS SINE Alu 221 296 -16 229 318 0 0 chr2 55048160 55048223 -198208360 + (TA)n Simple_repeat Simple_repeat 1 63 0 251 172 0 78 chr2 55048266 55048330 -198208253 - L1MCa LINE L1 -4362 2064 2006 4463 151 13 22 chr2 55048564 55049414 -198207169 + L1PA15 LINE L1 519 1409 -4734 14903 195 11 22 chr2 55049534 55050789 -198205794 + L1P LINE L1 620 1888 -4258 1882 140 63 0 chr2 55050789 55051075 -198205508 - AluY SINE Alu -7 304 1 14903 195 11 22 chr2 55051075 55053057 -198203526 + L1P LINE L1 1888 3819 -2327 11167 189 55 60 chr2 55053057 55054489 -198202094 + L1PA15 LINE L1 2285 3723 -2757 783 174 29 106 chr2 55054489 55054696 -198201887 + AluJo SINE Alu 115 305 -7 11167 189 55 60 chr2 55054696 55055793 -198200790 + L1PA15 LINE L1 3723 4825 -1655 1879 133 28 0 chr2 55055793 55056078 -198200505 + AluSx SINE Alu 5 297 -15 11167 189 55 60 chr2 55056078 55057561 -198199022 + L1PA15 LINE L1 4825 6476 -4 2353 57 0 7 chr2 55057563 55057859 -198198724 + AluY SINE Alu 1 294 -17 193 318 91 0 chr2 55058409 55058475 -198198108 + L2 LINE L2 3143 3214 -58 293 294 90 136 chr2 55058899 55059984 -198196599 - L2 LINE L2 -454 2860 1825 306 0 0 0 chr2 55060055 55060089 -198196494 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 435 364 34 14 chr2 55061795 55062004 -198194579 - MIR SINE MIR -1 261 49 1099 328 106 14 chr2 55062221 55062721 -198193862 + MLT1G1 LTR MaLR 50 595 0 615 234 139 13 chr2 55062886 55063044 -198193539 + MER5A DNA MER1_type 9 186 -3 24 0 0 0 chr2 55063524 55063548 -198193035 + AT_rich Low_complexity Low_complexity 1 24 0 181 345 58 65 chr2 55063970 55064109 -198192474 - MIR3 SINE MIR -39 169 32 587 228 32 13 chr2 55064218 55064376 -198192207 + MER3 DNA MER1_type 9 122 -87 1794 207 22 3 chr2 55065696 55066054 -198190529 + MLT1A1 LTR MaLR 1 365 0 319 333 57 0 chr2 55067301 55067424 -198189159 + MIR SINE MIR 23 152 -110 1001 146 192 0 chr2 55067616 55067856 -198188727 - L1MA8 LINE L1 0 6291 6006 1039 217 109 45 chr2 55068301 55068660 -198187923 - L1ME2 LINE L1 -23 6210 5829 733 172 104 0 chr2 55068689 55068823 -198187760 - MLT2B1 LTR ERVL 0 520 373 1006 142 0 18 chr2 55068828 55068988 -198187595 + MLT1A1 LTR MaLR 1 159 -206 1923 127 28 3 chr2 55068988 55069271 -198187312 + AluSc SINE Alu 1 290 -19 1105 212 31 0 chr2 55069320 55069546 -198187037 + MLT1A1 LTR MaLR 133 365 0 1389 205 92 35 chr2 55069564 55069911 -198186672 - MLT2B1 LTR ERVL -153 367 1 4980 258 71 66 chr2 55070002 55070418 -198186165 - L1ME2 LINE L1 -690 5549 5136 345 109 0 0 chr2 55070418 55070482 -198186101 + (TA)n Simple_repeat Simple_repeat 2 65 0 4980 258 71 66 chr2 55070482 55072289 -198184294 - L1ME2 LINE L1 -1103 5136 3353 2171 82 0 3 chr2 55072289 55072582 -198184001 - AluY SINE Alu -19 292 1 4980 258 71 66 chr2 55072582 55073904 -198182679 - L1ME2 LINE L1 -2886 3353 2038 348 296 35 35 chr2 55074130 55074272 -198182311 - L1ME2 LINE L1 -5923 282 141 777 214 25 92 chr2 55075415 55075605 -198180978 - MLT1B LTR MaLR -166 224 52 1470 199 135 26 chr2 55075605 55075991 -198180592 - MSTA LTR MaLR 0 428 1 777 214 25 92 chr2 55075991 55076038 -198180545 - MLT1B LTR MaLR -338 52 3 548 270 88 109 chr2 55076313 55076879 -198179704 + LTR67 LTR ERVL 1 554 -3 1325 159 53 5 chr2 55076976 55077241 -198179342 - L1MA7 LINE L1 -268 5893 5623 1732 171 34 23 chr2 55077241 55077626 -198178957 + L1MA7 LINE L1 5899 6288 -3 26 83 0 28 chr2 55077626 55077734 -198178849 + AT_rich Low_complexity Low_complexity 1 105 0 1464 279 44 47 chr2 55077962 55078566 -198178017 + MER69 DNA AcHobo 126 778 -1748 474 250 137 14 chr2 55078598 55078882 -198177701 + MER69 DNA AcHobo 2024 2342 -184 2418 261 33 36 chr2 55078934 55079467 -198177116 - L1ME1 LINE L1 -65 6101 5571 2274 87 0 3 chr2 55079467 55079767 -198176816 - AluY SINE Alu -12 299 1 2418 261 33 36 chr2 55079767 55080164 -198176419 - L1ME1 LINE L1 -595 5571 5174 383 340 64 29 chr2 55080750 55081195 -198175388 - MERVL LTR ERVL -2553 2932 2467 5049 153 3 2 chr2 55081195 55082054 -198174529 + L1P LINE L1 4208 5067 -1079 707 130 0 0 chr2 55082054 55082169 -198174414 + L1P LINE L1 4934 5048 -1098 5900 97 25 6 chr2 55082171 55083385 -198173198 + L1PA10 LINE L1 4917 6152 -16 1137 299 22 23 chr2 55083400 55083853 -198172730 - MERVL LTR ERVL -2514 2482 1982 624 322 25 20 chr2 55084435 55084446 -198172137 - MIR SINE MIR -16 246 237 2083 106 34 0 chr2 55084446 55084739 -198171844 + AluSx SINE Alu 1 303 -9 624 322 25 20 chr2 55084739 55084972 -198171611 - MIR SINE MIR -25 237 1 3258 202 14 17 chr2 55085226 55085880 -198170703 - MER82 DNA MER2_type -1 652 1 1608 209 104 5 chr2 55085953 55086327 -198170256 + LTR52 LTR ERVL 1 411 -10 318 289 100 62 chr2 55087860 55088151 -198168432 + MLT1L LTR MaLR 156 457 -158 21 57 0 0 chr2 55088576 55088611 -198167972 + AT_rich Low_complexity Low_complexity 1 35 0 696 255 75 28 chr2 55089311 55089523 -198167060 - MIR SINE MIR -38 224 3 227 258 155 0 chr2 55089696 55089793 -198166790 + MLT1J LTR MaLR 40 151 -360 216 402 9 0 chr2 55091147 55091254 -198165329 + MIR SINE MIR 74 181 -81 223 359 15 23 chr2 55092172 55092303 -198164280 + MIR3 SINE MIR 30 159 -49 300 264 71 80 chr2 55092445 55092505 -198164078 + L1MC/D LINE L1 5338 5397 -773 2490 52 0 10 chr2 55092505 55092811 -198163772 + AluY SINE Alu 1 303 -8 300 264 71 80 chr2 55092811 55092962 -198163621 + L1MC/D LINE L1 5397 5547 -623 533 105 35 23 chr2 55092979 55093065 -198163518 - THE1C LTR MaLR -288 87 1 21 57 0 0 chr2 55093290 55093325 -198163258 + AT_rich Low_complexity Low_complexity 1 35 0 688 249 39 11 chr2 55093959 55094140 -198162443 + LTR41 LTR ERVL 5 190 -583 494 239 33 99 chr2 55094307 55094579 -198162004 + LTR41 LTR ERVL 451 704 -69 2739 208 32 27 chr2 55094595 55095260 -198161323 - L1MB7 LINE L1 -18 6166 5499 3009 272 78 11 chr2 55095261 55096823 -198159760 - L1MB7 LINE L1 -2153 3993 2254 * 4804 228 10 10 chr2 55096798 55098007 -198158576 - L1 LINE L1 -1459 4687 3479 341 239 39 5 chr2 55098002 55098133 -198158450 + L1M4 LINE L1 3694 3831 -2315 * 4118 208 40 23 chr2 55098134 55099064 -198157519 - L1PA15-16 LINE L1 -5015 1834 846 2975 229 70 61 chr2 55099062 55101061 -198155522 - L1M4c LINE L1 -4055 2770 587 * 330 312 57 0 chr2 55101060 55101201 -198155382 - L1M4c LINE L1 -6391 151 3 * 21 57 0 0 chr2 55102408 55102443 -198154140 + AT_rich Low_complexity Low_complexity 1 35 0 530 369 72 12 chr2 55109271 55109672 -198146911 - L2 LINE L2 -47 3266 2842 462 318 102 25 chr2 55109711 55109985 -198146598 - L2 LINE L2 -590 2724 2430 639 331 126 39 chr2 55110037 55110599 -198145984 - L2 LINE L2 -2568 746 136 31 26 0 0 chr2 55110612 55110650 -198145933 + AT_rich Low_complexity Low_complexity 1 38 0 279 277 40 30 chr2 55112290 55112391 -198144192 - MER94 DNA DNA -23 111 10 342 319 52 15 chr2 55112660 55112795 -198143788 + MIR SINE MIR 12 151 -111 2046 256 55 8 chr2 55114496 55115117 -198141466 - L1ME3A LINE L1 -16 6154 5505 704 222 33 0 chr2 55115142 55115295 -198141288 - L1MC1 LINE L1 0 6333 6176 472 246 54 26 chr2 55115285 55115559 -198141024 - L1ME3A LINE L1 -665 5499 5217 * 22 0 0 0 chr2 55115708 55115730 -198140853 + AT_rich Low_complexity Low_complexity 1 22 0 961 81 0 0 chr2 55116132 55116268 -198140315 - AluSp/q SINE Alu -4 309 174 1027 296 42 84 chr2 55116758 55116977 -198139606 + MER115 DNA AcHobo 121 348 -345 595 166 191 0 chr2 55116977 55117134 -198139449 - MER53 DNA DNA -1 188 2 1027 296 42 84 chr2 55117134 55117511 -198139072 + MER115 DNA AcHobo 348 692 -1 550 239 55 5 chr2 55117769 55117937 -198138646 + MIR SINE MIR 86 262 0 2222 89 7 0 chr2 55118363 55118656 -198137927 - AluY SINE Alu -15 296 2 1427 201 102 39 chr2 55119284 55119723 -198136860 - MLT1C LTR MaLR 0 467 1 247 266 0 0 chr2 55119811 55119875 -198136708 - L2 LINE L2 -4 3268 3205 412 278 196 61 chr2 55119892 55120320 -198136263 - MLT1J LTR MaLR 0 511 26 2141 193 37 37 chr2 55120386 55120872 -198135711 - MLT1D LTR MaLR 0 505 20 624 297 59 14 chr2 55122681 55122903 -198133680 + MIR SINE MIR 18 249 -13 417 137 0 0 chr2 55124058 55124131 -198132452 - AluSx SINE Alu -2 308 236 1299 119 6 0 chr2 55124132 55124308 -198132275 - AluSx SINE Alu -124 188 12 477 252 49 0 chr2 55124442 55124565 -198132018 - MER94 DNA DNA -5 129 1 24 32 0 0 chr2 55125131 55125162 -198131421 + AT_rich Low_complexity Low_complexity 1 31 0 281 143 0 32 chr2 55125224 55125287 -198131296 + (GGGA)n Simple_repeat Simple_repeat 1 61 0 21 36 0 0 chr2 55125558 55125586 -198130997 + AT_rich Low_complexity Low_complexity 1 28 0 2693 250 64 58 chr2 55125785 55126032 -198130551 - L1ME1 LINE L1 -5 6161 5917 3391 25 0 0 chr2 55126032 55126429 -198130154 - L1PA2 LINE L1 0 6155 5759 2693 250 64 58 chr2 55126429 55128036 -198128547 - L1ME1 LINE L1 -249 5917 4314 671 288 130 78 chr2 55128124 55128561 -198128022 + MLT1E LTR MaLR 106 591 -2 1183 277 148 29 chr2 55128571 55128892 -198127691 - L1ME1 LINE L1 -1832 4314 4033 422 243 0 0 chr2 55128892 55128995 -198127588 - L1PB4 LINE L1 0 6156 6054 1183 277 148 29 chr2 55128995 55129409 -198127174 - L1ME1 LINE L1 -2113 4033 3491 2382 233 18 32 chr2 55129409 55130320 -198126263 - L1MB8 LINE L1 -6 6241 5049 * 24975 153 15 19 chr2 55130311 55136041 -198120542 - L1PA8 LINE L1 0 6487 771 2346 206 4 15 chr2 55136030 55136553 -198120030 - L1PA8 LINE L1 -5357 518 2 * 323 239 0 0 chr2 55136553 55136624 -198119959 - L1MB8 LINE L1 -1144 5071 5001 * 422 253 41 27 chr2 55136621 55136767 -198119816 - L1MB8 LINE L1 -3326 2889 2742 1972 161 45 29 chr2 55136775 55137196 -198119387 - L1MCa LINE L1 -5221 1205 778 1002 203 92 5 chr2 55137196 55137413 -198119170 - L1MCa LINE L1 -6170 256 21 * 1246 254 61 54 chr2 55137412 55137975 -198118608 - L1MB8 LINE L1 -3655 2560 2025 1970 70 51 0 chr2 55137975 55138259 -198118324 - AluY SINE Alu 0 310 14 1246 254 61 54 chr2 55138259 55138490 -198118093 - L1MB8 LINE L1 -4190 2025 1797 479 127 0 0 chr2 55138490 55138561 -198118022 - AluS SINE Alu -242 71 1 5968 155 24 24 chr2 55138792 55140445 -198116138 + L1MA5A LINE L1 4631 6287 -10 234 0 0 0 chr2 55141586 55141612 -198114971 + (A)n Simple_repeat Simple_repeat 1 26 0 2506 181 15 6 chr2 55141752 55142232 -198114351 + L1PA16 LINE L1 5683 6166 0 918 234 97 16 chr2 55142566 55142874 -198113709 + MER46C DNA MER2_type 5 337 -1 424 234 200 7 chr2 55144263 55144408 -198112175 + MER5A DNA MER1_type 17 189 0 241 328 38 40 chr2 55145791 55146043 -198110540 + L1MC3 LINE L1 6690 6849 -936 519 297 48 6 chr2 55147413 55147578 -198109005 - MIR3 SINE MIR -6 202 31 279 0 0 0 chr2 55148121 55148152 -198108431 + (TG)n Simple_repeat Simple_repeat 2 32 0 550 196 0 19 chr2 55148160 55148267 -198108316 + Tigger3(Golem) DNA MER2_type 4 108 -2921 * 4288 142 23 15 chr2 55148258 55149003 -198107580 + Tigger3(Golem) DNA MER2_type 2277 3027 -2 1577 160 89 49 chr2 55149165 55149436 -198107147 - Charlie1 DNA MER1_type -1 2760 2501 2017 136 7 7 chr2 55149436 55149745 -198106838 - AluSx SINE Alu -3 309 1 1577 160 89 49 chr2 55149745 55149964 -198106619 - Charlie1 DNA MER1_type -260 2501 1 312 91 0 0 chr2 55150797 55150841 -198105742 + (CA)n Simple_repeat Simple_repeat 1 44 0 287 154 121 44 chr2 55151972 55152063 -198104520 - MER53 DNA DNA -3 186 89 478 294 72 51 chr2 55152388 55152664 -198103919 - LTR67 LTR ERVL -1 556 275 2165 125 3 0 chr2 55152737 55153041 -198103542 - AluSx SINE Alu -7 305 1 317 260 78 47 chr2 55153046 55153304 -198103279 - L1M4 LINE L1 -2616 3530 3265 2131 108 0 3 chr2 55153306 55153592 -198102991 - AluSc SINE Alu -12 297 13 316 391 24 33 chr2 55153600 55153812 -198102771 - LTR67 LTR ERVL -341 216 7 2219 149 9 70 chr2 55153820 55154232 -198102351 + MSTA LTR MaLR 1 384 -44 2044 134 10 0 chr2 55154232 55154537 -198102046 - AluSg SINE Alu 0 310 3 2219 149 9 70 chr2 55154537 55154580 -198102003 + MSTA LTR MaLR 384 428 0 1656 191 3 3 chr2 55154831 55155135 -198101448 + AluJo SINE Alu 2 305 -7 249 57 0 0 chr2 55155142 55155177 -198101406 + (CAAAAA)n Simple_repeat Simple_repeat 1 35 0 3243 147 5 38 chr2 55156471 55157029 -198099554 + L1PB3 LINE L1 5608 6147 -7 182 269 19 19 chr2 55158674 55158726 -198097857 - MIR SINE MIR -10 252 201 220 193 35 0 chr2 55158829 55158886 -198097697 + (CATATA)n Simple_repeat Simple_repeat 4 62 0 262 296 45 11 chr2 55159755 55159843 -198096740 + L2 LINE L2 3182 3272 0 999 321 49 55 chr2 55161341 55162256 -198094327 - L2 LINE L2 -3 3310 2395 234 359 62 54 chr2 55162430 55162706 -198093877 + L2 LINE L2 2427 2704 -610 618 118 0 0 chr2 55162906 55163008 -198093575 + (TA)n Simple_repeat Simple_repeat 2 103 0 254 244 33 56 chr2 55165582 55165672 -198090911 + MIR SINE MIR 64 151 -111 260 218 18 0 chr2 55165909 55165964 -198090619 - MER5B DNA MER1_type -4 174 119 333 233 14 103 chr2 55169120 55169266 -198087317 - MER94 DNA DNA -1 133 1 381 352 65 14 chr2 55170793 55171009 -198085574 + MIR SINE MIR 2 228 -34 258 340 77 31 chr2 55171264 55171458 -198085125 + L2 LINE L2 2554 2756 -558 732 124 0 0 chr2 55171508 55171613 -198084970 - AluSx SINE Alu -14 296 192 1025 128 0 0 chr2 55171614 55171755 -198084828 - AluSx SINE Alu -171 141 1 294 173 0 0 chr2 55172557 55172609 -198083974 - L2 LINE L2 0 3313 3262 941 229 33 14 chr2 55173016 55173230 -198083353 + MER58A DNA MER1_type 1 218 -6 1493 161 4 4 chr2 55173328 55173583 -198083000 - L1MA4A LINE L1 -266 6739 6485 198 167 0 0 chr2 55173586 55173622 -198082961 + (TA)n Simple_repeat Simple_repeat 1 36 0 238 235 24 12 chr2 55173623 55173708 -198082875 - L1MC4 LINE L1 -1340 6702 6617 216 0 0 0 chr2 55173708 55173732 -198082851 + (CA)n Simple_repeat Simple_repeat 1 24 0 9221 208 27 9 chr2 55173732 55176038 -198080545 - L1MA4A LINE L1 -526 6479 3191 * 10762 229 70 24 chr2 55176035 55178773 -198077810 - L1MA4A LINE L1 -3982 2867 3 953 202 61 14 chr2 55180027 55180240 -198076343 + MER58A DNA MER1_type 2 224 0 393 333 56 7 chr2 55180240 55180384 -198076199 - MIR SINE MIR -59 203 53 237 339 0 0 chr2 55180428 55180490 -198076093 + MIR SINE MIR 86 147 -61 230 214 0 18 chr2 55180940 55180996 -198075587 + LTR33A LTR ERVL 3 57 -466 2127 223 11 23 chr2 55182078 55182609 -198073974 + LTR27 LTR ERV1 3 1233 -140 685 184 7 35 chr2 55182647 55182788 -198073795 + LTR27 LTR ERV1 498 634 -2 283 194 15 15 chr2 55183500 55183567 -198073016 + L1MC5 LINE L1 7841 7907 -54 9220 191 13 13 chr2 55184094 55186723 -198069860 + L1PA13 LINE L1 3499 6152 -11 296 292 39 58 chr2 55188109 55188263 -198068320 + L2 LINE L2 2696 2846 -468 234 0 0 0 chr2 55188584 55188610 -198067973 + (TGAA)n Simple_repeat Simple_repeat 4 29 0 513 71 0 0 chr2 55189753 55189823 -198066760 + (TTTC)n Simple_repeat Simple_repeat 4 73 0 5582 112 5 0 chr2 55190125 55190945 -198065638 - L1PA7 LINE L1 -832 5314 4491 6637 62 2 3 chr2 55190945 55191803 -198064780 + L1PA7 LINE L1 5297 6153 -1 1526 273 67 9 chr2 55191955 55192593 -198063990 + L1ME1 LINE L1 683 1357 -5039 1743 255 50 26 chr2 55192604 55193413 -198063170 + L1PBa LINE L1 1526 2295 -3920 474 223 0 0 chr2 55193422 55193525 -198063058 + L1ME1 LINE L1 2516 2618 -3597 * 1854 236 81 17 chr2 55193523 55194288 -198062295 + L1ME1 LINE L1 5111 5921 -314 22 35 0 0 chr2 55194913 55194942 -198061641 + AT_rich Low_complexity Low_complexity 1 29 0 192 279 35 35 chr2 55195421 55195507 -198061076 - MIR SINE MIR -2 260 175 1780 139 62 23 chr2 55196445 55196798 -198059785 - L1MA5 LINE L1 0 6300 5934 435 181 0 0 chr2 55196799 55196871 -198059712 + L1MA5 LINE L1 5857 5928 -372 558 298 62 96 chr2 55200277 55201083 -198055500 + L2 LINE L2 2509 3309 -4 185 375 12 0 chr2 55202601 55202681 -198053902 - L3 LINE CR1 -2 1575 1495 678 233 0 0 chr2 55202691 55202822 -198053761 + MLT1A1 LTR MaLR 1 131 -234 356 208 42 0 chr2 55202822 55202894 -198053689 + MER6 DNA MER2_type -1 794 -71 283 185 74 0 chr2 55202888 55202942 -198053641 + MER6 DNA MER2_type 127 184 -681 * 1567 150 11 0 chr2 55202952 55203218 -198053365 + MER6 DNA MER2_type 597 865 0 855 260 62 31 chr2 55203218 55203445 -198053138 + MLT1A1 LTR MaLR 132 365 0 559 290 70 72 chr2 55203453 55203798 -198052785 - L3 LINE CR1 -100 1477 1134 530 257 95 42 chr2 55205120 55205361 -198051222 - Charlie7 DNA MER1_type -2093 519 266 181 293 120 13 chr2 55205362 55205437 -198051146 - MER5A DNA MER1_type -98 91 9 12934 27 0 0 chr2 55205478 55207794 -198048789 + L1PA3 LINE L1 3848 6162 0 478 243 168 29 chr2 55208427 55208600 -198047983 + MLT1H1 LTR MaLR 327 523 -32 286 243 0 43 chr2 55208741 55208811 -198047772 + Tigger5 DNA MER2_type 1 67 -2256 471 169 13 0 chr2 55208874 55208951 -198047632 + Tigger5 DNA MER2_type 2245 2322 -1 319 284 0 21 chr2 55208956 55209051 -198047532 - L1MC4 LINE L1 -1339 6703 6611 230 284 23 0 chr2 55209086 55209174 -198047409 + L1MC4 LINE L1 6614 6703 -1339 * 257 241 0 46 chr2 55209144 55209231 -198047352 - L1MC4 LINE L1 -1339 6703 6621 487 378 0 0 chr2 55209233 55209413 -198047170 + (TA)n Simple_repeat Simple_repeat 1 180 0 300 277 48 0 chr2 55209416 55209499 -198047084 - L1MC4 LINE L1 -1339 6703 6617 392 219 40 7 chr2 55209510 55209661 -198046922 + (CATA)n Simple_repeat Simple_repeat 4 159 0 227 233 58 0 chr2 55209663 55209749 -198046834 - L1MC4 LINE L1 -1339 6703 6613 263 140 20 0 chr2 55209764 55209814 -198046769 + (TA)n Simple_repeat Simple_repeat 2 52 0 365 283 0 9 chr2 55210106 55210219 -198046364 - L1 LINE L1 -1198 4948 4837 1181 166 51 9 chr2 55210629 55210846 -198045737 + L1PA15 LINE L1 5934 6159 -6 2126 220 39 4 chr2 55211186 55211723 -198044860 + L1MB2 LINE L1 4061 4616 -1530 4325 182 21 44 chr2 55211743 55212233 -198044350 + L1MB2 LINE L1 4757 5257 -914 2082 157 8 22 chr2 55212233 55212602 -198043981 - THE1B LTR MaLR 0 364 1 11199 105 10 0 chr2 55212602 55214167 -198042416 - THE1B-int LTR MaLR 0 1580 1 2316 135 5 22 chr2 55214167 55214537 -198042046 - THE1B LTR MaLR 0 364 1 4325 182 21 44 chr2 55214537 55215485 -198041098 + L1MB2 LINE L1 5254 6169 -2 351 0 0 0 chr2 55215808 55215847 -198040736 + (CA)n Simple_repeat Simple_repeat 2 40 0 537 276 122 58 chr2 55216520 55217087 -198039496 + MLT2F LTR ERVL 28 660 -3 247 261 127 37 chr2 55217614 55217748 -198038835 - MIR SINE MIR -6 256 111 27 29 0 0 chr2 55218439 55218473 -198038110 + AT_rich Low_complexity Low_complexity 1 34 0 373 136 0 31 chr2 55221433 55221517 -198035066 + L1MA9 LINE L1 5843 5920 -382 2386 179 97 138 chr2 55221565 55222484 -198034099 + MER21A LTR ERV1 32 912 -19 13273 146 44 9 chr2 55222498 55224804 -198031779 + Tigger1 DNA MER2_type 33 2418 0 1877 146 74 26 chr2 55224804 55225181 -198031402 + L1MA9 LINE L1 5918 6312 0 387 312 114 41 chr2 55225669 55226114 -198030469 + L1MEd LINE L1 829 1183 -1379 489 306 83 42 chr2 55226423 55226449 -198030134 - MLT1J1 LTR MaLR -61 385 362 996 196 30 126 chr2 55226449 55226853 -198029730 + MLT1A1 LTR MaLR 1 365 0 489 306 83 42 chr2 55226853 55227114 -198029469 - MLT1J1 LTR MaLR -84 362 86 203 171 0 0 chr2 55227180 55227217 -198029366 + (TTG)n Simple_repeat Simple_repeat 1 37 0 6383 98 11 1 chr2 55227260 55228406 -198028177 - L1PA13 LINE L1 -20 6143 4989 970 150 0 0 chr2 55228403 55228563 -198028020 + L1P LINE L1 4784 4943 -1203 * 21 0 0 0 chr2 55228713 55228734 -198027849 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 55228830 55228853 -198027730 + AT_rich Low_complexity Low_complexity 1 23 0 283 324 152 10 chr2 55229456 55229660 -198026923 - MIR SINE MIR -10 252 20 846 222 60 0 chr2 55229773 55230039 -198026544 + MER33 DNA MER1_type 43 324 0 338 220 7 135 chr2 55230132 55230273 -198026310 - L2 LINE L2 0 3313 3191 21 0 0 0 chr2 55230579 55230600 -198025983 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr2 55231014 55231034 -198025549 + (CCCTAA)n Simple_repeat Simple_repeat 3 22 0 600 156 0 46 chr2 55231980 55232089 -198024494 - FRAM SINE Alu -62 114 11 2371 109 71 0 chr2 55232454 55232804 -198023779 - THE1C LTR MaLR 0 375 1 10216 110 11 63 chr2 55232804 55234470 -198022113 - THE1C-int LTR MaLR 0 1580 2 2396 129 0 29 chr2 55234471 55234857 -198021726 - THE1C LTR MaLR 0 375 1 2169 116 10 0 chr2 55235104 55235405 -198021178 + AluSq SINE Alu 9 312 -1 227 253 22 22 chr2 55236388 55236479 -198020104 - L1ME4a LINE L1 -56 6065 5975 293 310 44 13 chr2 55236531 55236689 -198019894 - L1ME4a LINE L1 -236 5885 5723 905 250 136 58 chr2 55236801 55237337 -198019246 - L1ME3A LINE L1 -5 6165 5588 327 155 17 0 chr2 55237348 55237406 -198019177 - MLT1G1 LTR MaLR -5 590 532 271 143 0 0 chr2 55237478 55237520 -198019063 - MLT1G1 LTR MaLR -71 522 481 466 311 115 39 chr2 55237856 55238264 -198018319 - MLT1J1 LTR MaLR -7 439 1 2074 213 90 17 chr2 55240455 55240991 -198015592 + MLT1E2 LTR MaLR 52 626 0 272 257 187 53 chr2 55241587 55241758 -198014825 + MLT1L LTR MaLR 37 230 -385 24 32 0 0 chr2 55241776 55241807 -198014776 + AT_rich Low_complexity Low_complexity 1 31 0 1055 85 0 0 chr2 55241807 55241948 -198014635 - L1MA1 LINE L1 0 6302 6162 1101 117 11 22 chr2 55241948 55242128 -198014455 + L1MA1 LINE L1 5854 6031 -271 2105 127 3 0 chr2 55242129 55242428 -198014155 + AluSq SINE Alu 1 300 -13 2149 182 5 8 chr2 55242521 55242912 -198013671 + MLT1B LTR MaLR 1 390 0 2150 125 10 0 chr2 55243575 55243879 -198012704 + AluSq SINE Alu 1 307 -6 183 80 0 0 chr2 55243879 55243904 -198012679 + (GGAA)n Simple_repeat Simple_repeat 1 25 0 377 317 168 24 chr2 55245596 55245978 -198010605 + L2 LINE L2 2541 2977 -337 1953 136 10 14 chr2 55246080 55246375 -198010208 - AluSx SINE Alu -18 294 1 1424 256 46 68 chr2 55246573 55247179 -198009404 - MLT1E LTR MaLR 0 593 1 43 20 0 0 chr2 55247238 55247288 -198009295 + AT_rich Low_complexity Low_complexity 1 50 0 212 200 200 0 chr2 55247306 55247361 -198009222 + MIR SINE MIR 92 157 -105 510 313 90 26 chr2 55247426 55247659 -198008924 - MIR SINE MIR -2 260 13 1256 218 62 24 chr2 55247778 55248149 -198008434 + MER58D DNA MER1_type 1 385 -1 222 352 0 0 chr2 55248899 55248970 -198007613 + L2 LINE L2 2992 3062 -210 274 327 19 9 chr2 55249076 55249183 -198007400 + L2 LINE L2 2736 2843 -471 636 183 8 8 chr2 55249183 55249314 -198007269 - MSTC LTR MaLR 0 428 298 420 316 250 33 chr2 55249330 55249666 -198006917 + L2 LINE L2 2871 3279 -34 21 0 0 0 chr2 55250199 55250220 -198006363 + AT_rich Low_complexity Low_complexity 1 21 0 2270 56 0 100 chr2 55250605 55250946 -198005637 + AluY SINE Alu 1 307 -4 201 293 66 57 chr2 55251016 55251122 -198005461 + MIR SINE MIR 8 114 -148 39 74 0 0 chr2 55251462 55251543 -198005040 + AT_rich Low_complexity Low_complexity 1 81 0 22 35 0 0 chr2 55253050 55253079 -198003504 + AT_rich Low_complexity Low_complexity 1 29 0 2204 93 0 0 chr2 55253305 55253594 -198002989 + AluY SINE Alu 1 289 -22 207 105 26 0 chr2 55253602 55253640 -198002943 + (CAAA)n Simple_repeat Simple_repeat 4 42 0 246 297 108 0 chr2 55254544 55254618 -198001965 - L2 LINE L2 -5 3308 3227 637 256 74 6 chr2 55255047 55255223 -198001360 + MLT1I LTR MaLR 25 212 -197 491 197 93 38 chr2 55255445 55255628 -198000955 - L1M4 LINE L1 -2131 4015 3823 665 241 7 7 chr2 55255634 55255775 -198000808 - MIR SINE MIR -89 173 33 4235 155 16 32 chr2 55256043 55256798 -197999785 - MER49 LTR ERV1 -12 911 169 522 218 0 0 chr2 55256794 55256895 -197999688 - MER72 LTR ERV1 -621 101 1 * 2449 110 59 54 chr2 55256979 55257405 -197999178 + MSTA LTR MaLR 1 428 0 1438 198 121 99 chr2 55257519 55258074 -197998509 - MLT1F1 LTR MaLR 0 567 1 183 139 0 0 chr2 55258371 55258407 -197998176 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 1773 161 7 30 chr2 55258461 55258765 -197997818 - AluJo SINE Alu -15 297 1 30 0 0 0 chr2 55259335 55259365 -197997218 + AT_rich Low_complexity Low_complexity 1 30 0 1818 254 52 50 chr2 55259986 55260759 -197995824 + MER20B DNA MER1_type 9 782 -1 202 128 26 0 chr2 55260849 55260888 -197995695 + CT-rich Low_complexity Low_complexity 1 40 0 839 180 22 22 chr2 55260968 55261216 -197995367 + (TA)n Simple_repeat Simple_repeat 1 247 -113 1938 137 25 0 chr2 55261216 55261500 -197995083 - AluSx SINE Alu -21 291 1 839 180 22 22 chr2 55261500 55261549 -197995034 + (TA)n Simple_repeat Simple_repeat 247 294 -66 273 57 0 0 chr2 55261549 55261584 -197994999 + (CATA)n Simple_repeat Simple_repeat 2 36 0 839 180 22 22 chr2 55261584 55261644 -197994939 + (TA)n Simple_repeat Simple_repeat 294 360 0 468 214 95 16 chr2 55263960 55264086 -197992497 + MIR SINE MIR 110 245 -17 249 311 5 76 chr2 55264889 55265092 -197991491 + MIR SINE MIR 30 212 -50 1159 155 78 2 chr2 55265576 55265900 -197990683 - MSTB1 LTR MaLR -26 406 1 551 347 83 38 chr2 55266064 55266632 -197989951 - L2 LINE L2 -2 3311 2720 286 321 125 0 chr2 55266742 55266854 -197989729 - L2 LINE L2 -620 2694 2569 298 288 171 21 chr2 55267416 55267656 -197988927 - L1MC4 LINE L1 -144 7898 7623 253 277 30 0 chr2 55267653 55267754 -197988829 - L1MC4 LINE L1 -813 7229 7126 * 212 171 24 0 chr2 55267921 55267962 -197988621 + (TG)n Simple_repeat Simple_repeat 1 42 0 180 0 0 0 chr2 55267962 55267982 -197988601 + (TTTTTG)n Simple_repeat Simple_repeat 4 23 0 1842 171 3 0 chr2 55268086 55268379 -197988204 - AluSx SINE Alu -13 299 6 884 296 102 47 chr2 55268381 55268771 -197987812 + MLT1K LTR MaLR 126 542 -46 405 0 0 0 chr2 55268771 55268816 -197987767 + (CA)n Simple_repeat Simple_repeat 2 46 0 884 296 102 47 chr2 55268816 55268847 -197987736 + MLT1K LTR MaLR 542 570 -18 276 386 35 35 chr2 55268903 55269048 -197987535 - MIR3 SINE MIR -49 159 15 1996 119 0 7 chr2 55270566 55270843 -197985740 - AluSx SINE Alu 0 312 38 9830 35 2 0 chr2 55271123 55273082 -197983501 - L1PA3 LINE L1 -3 6152 4190 480 284 91 63 chr2 55273507 55274113 -197982470 + L1MEd LINE L1 533 1155 -4964 24 32 0 0 chr2 55274282 55274313 -197982270 + AT_rich Low_complexity Low_complexity 1 31 0 591 234 45 0 chr2 55274478 55274632 -197981951 - L1MA7 LINE L1 -339 5952 5792 386 254 175 13 chr2 55274632 55274846 -197981737 + L1MEd LINE L1 3101 3359 -2770 21 57 0 0 chr2 55274908 55274943 -197981640 + AT_rich Low_complexity Low_complexity 1 35 0 268 201 50 138 chr2 55275429 55275588 -197980995 + L2 LINE L2 3169 3313 0 222 37 0 0 chr2 55276570 55276597 -197979986 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 225 361 33 8 chr2 55276604 55276726 -197979857 - L2 LINE L2 -11 3261 3137 2905 146 21 57 chr2 55276877 55277494 -197979089 - L1PA14 LINE L1 -820 5326 4732 * 5635 94 37 1 chr2 55277489 55278305 -197978278 + L1PA14 LINE L1 5315 6159 -2 270 339 48 8 chr2 55278896 55279020 -197977563 + MIR SINE MIR 15 143 -119 196 361 37 90 chr2 55279545 55279980 -197976603 + L2 LINE L2 2836 3247 -25 190 95 48 24 chr2 55280327 55280369 -197976214 + GA-rich Low_complexity Low_complexity 2 44 0 492 18 0 0 chr2 55280731 55280788 -197975795 + (TG)n Simple_repeat Simple_repeat 1 57 0 210 71 0 0 chr2 55281590 55281618 -197974965 + (A)n Simple_repeat Simple_repeat 1 28 0 305 331 40 33 chr2 55282093 55282244 -197974339 - MER5A DNA MER1_type 0 189 38 1268 182 52 78 chr2 55282404 55282580 -197974003 - MER67D LTR ERV1 -196 347 184 2037 117 44 3 chr2 55282580 55282878 -197973705 - AluSx SINE Alu -2 310 1 1268 182 52 78 chr2 55282878 55283058 -197973525 - MER67D LTR ERV1 -359 184 1 346 148 0 74 chr2 55283162 55283243 -197973340 - L1MA6 LINE L1 0 6300 6226 801 200 6 12 chr2 55283262 55283432 -197973151 + L1MA6 LINE L1 5952 6120 -180 35 41 0 0 chr2 55283873 55283922 -197972661 + AT_rich Low_complexity Low_complexity 1 49 0 2306 91 0 0 chr2 55284507 55284804 -197971779 - AluY SINE Alu -14 297 1 2252 131 25 38 chr2 55285296 55285740 -197970843 - L1MA2 LINE L1 -10 6294 5857 1241 345 63 27 chr2 55285756 55286582 -197970001 + L2 LINE L2 2456 3313 0 915 182 133 49 chr2 55287252 55287516 -197969067 + MLT1A1 LTR MaLR 31 316 -49 519 310 102 9 chr2 55287531 55287747 -197968836 + MIR SINE MIR 27 262 0 2273 93 0 10 chr2 55288287 55288599 -197967984 - AluY SINE Alu -2 309 1 2219 102 0 0 chr2 55288599 55288883 -197967700 - AluSg SINE Alu -25 285 2 312 322 134 58 chr2 55289839 55290575 -197966008 - L2 LINE L2 0 3272 2444 204 350 62 0 chr2 55290659 55290756 -197965827 - L2 LINE L2 -1006 2308 2206 45 62 0 0 chr2 55291435 55291515 -197965068 + AT_rich Low_complexity Low_complexity 1 80 0 1743 182 14 0 chr2 55291969 55292265 -197964318 + AluSx SINE Alu 1 300 -12 536 366 4 12 chr2 55293120 55293371 -197963212 - MLT1I LTR MaLR 0 409 161 5341 135 5 12 chr2 55293995 55295569 -197961014 - L1PA16 LINE L1 -1 6165 4576 21 0 0 0 chr2 55295647 55295668 -197960915 + AT_rich Low_complexity Low_complexity 1 21 0 412 275 7 42 chr2 55296630 55296772 -197959811 + L1MEc LINE L1 1671 1807 -4589 543 213 6 53 chr2 55296807 55296976 -197959607 + L1MEc LINE L1 1906 2066 -4330 811 238 113 18 chr2 55297008 55297106 -197959477 - Charlie1b DNA MER1_type -2290 471 384 2097 185 3 3 chr2 55297106 55297469 -197959114 - MLT1A1 LTR MaLR -2 363 1 811 238 113 18 chr2 55297469 55297790 -197958793 - Charlie1b DNA MER1_type -2377 384 18 731 239 85 27 chr2 55297794 55298196 -197958387 + L1MEc LINE L1 2059 2483 -3913 862 257 19 37 chr2 55298222 55298308 -197958275 - MER82 DNA MER2_type -2 651 565 2339 84 0 3 chr2 55298308 55298605 -197957978 - AluSq SINE Alu -17 296 1 862 257 19 37 chr2 55298605 55298732 -197957851 - MER82 DNA MER2_type -88 565 442 287 306 70 51 chr2 55298762 55298919 -197957664 + MIR SINE MIR 2 161 -101 372 184 105 0 chr2 55298971 55299047 -197957536 - MER82 DNA MER2_type -559 94 11 818 207 144 16 chr2 55299071 55299390 -197957193 + L1MEc LINE L1 2477 2836 -3379 552 301 86 44 chr2 55299409 55299929 -197956654 + L1MEc LINE L1 3107 3693 -2522 653 299 86 0 chr2 55300070 55300476 -197956107 + L1ME3A LINE L1 2180 2606 -3609 716 263 98 44 chr2 55300498 55301310 -197955273 + L1ME3A LINE L1 5086 5973 -262 487 268 84 7 chr2 55301318 55301460 -197955123 + MER69A DNA AcHobo 4 156 -21 234 233 29 19 chr2 55301786 55301889 -197954694 + L1ME3A LINE L1 6128 6231 -8 252 307 50 36 chr2 55302153 55302293 -197954290 + L2 LINE L2 3168 3309 -4 246 62 0 0 chr2 55303004 55303036 -197953547 + (TGG)n Simple_repeat Simple_repeat 2 33 0 369 0 0 0 chr2 55303062 55303103 -197953480 + (TG)n Simple_repeat Simple_repeat 2 42 0 2071 118 0 0 chr2 55303746 55304056 -197952527 - AluSx SINE Alu 0 312 1 333 318 9 19 chr2 55304182 55304289 -197952294 - MER5A DNA MER1_type -77 112 7 475 313 51 28 chr2 55304346 55304522 -197952061 + MIR SINE MIR 3 182 -80 444 319 20 15 chr2 55304917 55305114 -197951469 - MLT1I LTR MaLR -153 256 59 283 255 103 48 chr2 55305191 55305336 -197951247 - MIR SINE MIR -25 237 85 291 253 77 22 chr2 55306144 55306235 -197950348 + MIR SINE MIR 48 143 -119 343 334 95 48 chr2 55306443 55307030 -197949553 + L2 LINE L2 1636 2250 -1064 6744 132 10 21 chr2 55308160 55308735 -197947848 + L1MA2 LINE L1 5034 5614 -690 2253 106 10 6 chr2 55308735 55309046 -197947537 + AluSx SINE Alu 1 312 0 6744 132 10 21 chr2 55309046 55309752 -197946831 + L1MA2 LINE L1 5614 6304 0 187 213 21 21 chr2 55310019 55310066 -197946517 - L3 LINE CR1 -490 1087 1041 * 354 332 39 31 chr2 55310059 55310262 -197946321 + MIR3 SINE MIR 13 216 -46 466 316 48 6 chr2 55311251 55311419 -197945164 + L2 LINE L2 2659 2833 -481 220 217 0 22 chr2 55311785 55311831 -197944752 + GA-rich Low_complexity Low_complexity 2 46 0 1312 215 34 31 chr2 55312329 55312622 -197943961 + MLT1A2 LTR MaLR 66 359 -15 22 0 0 0 chr2 55313054 55313076 -197943507 + AT_rich Low_complexity Low_complexity 1 22 0 352 222 111 22 chr2 55315257 55315392 -197941191 + L2 LINE L2 3163 3309 -4 2241 125 91 17 chr2 55316281 55316688 -197939895 + MSTB2 LTR MaLR 15 451 -6 210 318 85 47 chr2 55316980 55317191 -197939392 + L2 LINE L2 2636 2854 -460 432 255 50 68 chr2 55317538 55317699 -197938884 - MIR3 SINE MIR 0 208 51 210 37 0 0 chr2 55318057 55318084 -197938499 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2000 129 13 3 chr2 55318338 55318647 -197937936 + AluSx SINE Alu 1 312 0 205 354 25 0 chr2 55318787 55318866 -197937717 + MER91C DNA MER1_type 32 112 -28 2463 151 128 0 chr2 55318930 55319414 -197937169 + L1MB1 LINE L1 5622 6167 -1 2130 92 7 0 chr2 55320540 55320843 -197935740 - AluSq SINE Alu 0 305 1 22 35 0 0 chr2 55320977 55321006 -197935577 + AT_rich Low_complexity Low_complexity 1 29 0 585 308 59 25 chr2 55321434 55321501 -197935082 + MIR SINE MIR 13 76 -186 279 0 0 0 chr2 55321501 55321532 -197935051 + (TC)n Simple_repeat Simple_repeat 1 31 0 585 308 59 25 chr2 55321532 55321701 -197934882 + MIR SINE MIR 76 257 -5 387 355 28 0 chr2 55322493 55322600 -197933983 + L2 LINE L2 3200 3309 -4 2208 253 84 20 chr2 55322838 55323119 -197933464 + L1ME LINE L1 4449 4711 -1455 1875 162 49 0 chr2 55323119 55323447 -197933136 + MER2 DNA MER2_type 1 344 0 2208 253 84 20 chr2 55323447 55324252 -197932331 + L1ME LINE L1 4711 5588 -578 213 39 0 0 chr2 55324286 55324312 -197932271 + (CA)n Simple_repeat Simple_repeat 2 27 0 4668 219 21 2 chr2 55324312 55325696 -197930887 - L1P4 LINE L1 -589 5577 4165 3020 234 50 66 chr2 55325665 55326912 -197929671 - L1 LINE L1 -2446 3700 2473 * 985 69 0 15 chr2 55326911 55327042 -197929541 - L1PA8 LINE L1 -39 6133 6005 * 2221 88 3 25 chr2 55327072 55327389 -197929194 - AluSx SINE Alu -2 310 1 663 147 7 59 chr2 55327392 55327528 -197929055 + MER6 DNA MER2_type 14 863 -2 5938 184 34 23 chr2 55327649 55329915 -197926668 - L1MA7 LINE L1 0 6291 4009 10975 44 0 0 chr2 55330332 55331691 -197924892 - L1PA4 LINE L1 -1590 4556 3198 444 83 0 0 chr2 55331687 55331747 -197924836 + L1PA4 LINE L1 4563 4622 -1524 * 7382 35 0 0 chr2 55331851 55333119 -197923464 + L1PA4 LINE L1 4874 6155 0 5970 211 56 60 chr2 55333134 55334763 -197921820 + L1MC3 LINE L1 5737 7359 -426 1748 215 42 18 chr2 55335187 55335643 -197920940 + MLT1C LTR MaLR 1 467 0 3775 176 29 4 chr2 55336111 55336837 -197919746 - L1MC1 LINE L1 -1 6332 5589 657 133 78 36 chr2 55337679 55337845 -197918738 - L1MA7 LINE L1 -1 6290 6118 190 200 75 0 chr2 55337908 55337948 -197918635 - L2 LINE L2 -10 3303 3261 22 0 0 0 chr2 55337950 55337972 -197918611 + AT_rich Low_complexity Low_complexity 1 22 0 2102 132 135 5 chr2 55338705 55339084 -197917499 + MSTA LTR MaLR 1 428 0 196 294 78 29 chr2 55339744 55339846 -197916737 + MIR SINE MIR 50 156 -106 2302 137 7 30 chr2 55339846 55340256 -197916327 + L1PA16 LINE L1 5742 6144 -22 302 191 0 15 chr2 55340909 55340977 -197915606 - L1MC4 LINE L1 0 8042 7976 * 1245 215 133 3 chr2 55340973 55341340 -197915243 + L1MC4a LINE L1 6982 7396 -412 757 173 7 27 chr2 55341824 55341974 -197914609 - MLT1F LTR MaLR -2 540 394 240 269 78 28 chr2 55342053 55342194 -197914389 - MLT1F LTR MaLR -280 315 168 196 326 32 11 chr2 55342685 55342780 -197913803 + MER5A DNA MER1_type 86 182 -7 2201 159 21 19 chr2 55342849 55343269 -197913314 + L1MA8 LINE L1 5861 6281 -10 298 311 101 78 chr2 55343344 55343701 -197912882 - L1MC/D LINE L1 -2084 5724 5360 22 0 0 0 chr2 55344170 55344192 -197912391 + AT_rich Low_complexity Low_complexity 1 22 0 6628 75 3 0 chr2 55344584 55345650 -197910933 + L1PA7 LINE L1 5071 6139 -15 28 48 0 0 chr2 55345656 55345698 -197910885 + AT_rich Low_complexity Low_complexity 1 42 0 420 310 106 55 chr2 55345704 55346233 -197910350 - L3 LINE CR1 -180 1397 842 382 380 19 23 chr2 55346518 55346776 -197909807 - MIR SINE MIR -1 261 5 310 234 39 0 chr2 55347066 55347143 -197909440 + L2 LINE L2 3234 3313 0 26 23 0 23 chr2 55347887 55347906 -197908677 + AT_rich Low_complexity Low_complexity 1 19 -24 2201 92 0 13 chr2 55347906 55348210 -197908373 + AluY SINE Alu 1 300 -11 26 23 0 23 chr2 55348210 55348234 -197908349 + AT_rich Low_complexity Low_complexity 19 43 0 369 145 0 0 chr2 55348567 55348629 -197907954 + (GGGAA)n Simple_repeat Simple_repeat 5 66 0 2171 115 3 0 chr2 55349198 55349510 -197907073 + AluSq SINE Alu 1 313 0 237 350 50 0 chr2 55349825 55349905 -197906678 + L2 LINE L2 3141 3224 -48 495 313 80 77 chr2 55351842 55352219 -197904364 + L1ME4a LINE L1 5351 5728 -393 331 236 85 20 chr2 55352347 55352593 -197903990 + L1ME4a LINE L1 5788 6105 -16 7102 54 1 0 chr2 55352622 55353363 -197903220 + L1PA5 LINE L1 4513 6150 -4 7142 54 1 0 chr2 55353363 55354259 -197902324 + L1PA5 LINE L1 5254 6150 -4 252 59 0 0 chr2 55354329 55354363 -197902220 + (TG)n Simple_repeat Simple_repeat 2 35 0 21 0 0 0 chr2 55354367 55354388 -197902195 + AT_rich Low_complexity Low_complexity 1 21 0 487 301 44 55 chr2 55354890 55355162 -197901421 + L1MEd LINE L1 454 722 -5397 515 291 103 26 chr2 55355230 55356018 -197900565 + L1MEd LINE L1 816 1690 -4620 4005 194 62 21 chr2 55356110 55357856 -197898727 - L1MA10 LINE L1 -30 6304 4476 21 36 0 0 chr2 55357869 55357897 -197898686 + AT_rich Low_complexity Low_complexity 1 28 0 4112 259 60 66 chr2 55357971 55359702 -197896881 - MER77-int LTR ERV1 -2014 4744 2 1913 239 59 50 chr2 55359705 55360282 -197896301 - MER77 LTR ERV1 -2 603 22 386 301 126 8 chr2 55360322 55360561 -197896022 + L1M4 LINE L1 3679 3945 -2201 3714 201 35 16 chr2 55360565 55361316 -197895267 + L1MA6 LINE L1 1 765 -6403 * 4244 170 52 41 chr2 55361315 55362480 -197894103 + L1MA6 LINE L1 3479 4630 -2691 2228 105 7 0 chr2 55362480 55362774 -197893809 + AluSc SINE Alu 3 298 -11 4244 170 52 41 chr2 55362774 55363342 -197893241 + L1MA6 LINE L1 4630 5190 -2131 2049 117 3 0 chr2 55363342 55363632 -197892951 + AluSp SINE Alu 18 308 -5 4244 170 52 41 chr2 55363632 55364725 -197891858 + L1MA6 LINE L1 5190 6269 -1052 222 37 0 0 chr2 55364725 55364752 -197891831 + (TAA)n Simple_repeat Simple_repeat 2 28 0 4244 170 52 41 chr2 55364752 55364870 -197891713 + L1MA6 LINE L1 6269 6384 -937 1998 143 10 0 chr2 55364870 55365171 -197891412 + AluSq SINE Alu 1 304 -9 4244 170 52 41 chr2 55365171 55365933 -197890650 + L1MA6 LINE L1 6384 7317 -4 239 317 10 10 chr2 55366561 55366662 -197889921 + L1M4 LINE L1 4747 4847 -1299 863 176 25 0 chr2 55366883 55367042 -197889541 - MLT2C1 LTR ERVL -234 163 1 313 245 9 47 chr2 55367060 55367166 -197889417 + L1M4 LINE L1 5099 5200 -946 201 200 15 46 chr2 55367166 55367231 -197889352 + (TA)n Simple_repeat Simple_repeat 1 63 0 6247 82 9 11 chr2 55367252 55368190 -197888393 + L1PB2 LINE L1 5215 6150 -1 477 153 12 12 chr2 55368190 55368264 -197888319 + LOR1-int LTR ERV1 4656 4732 -3388 743 249 89 33 chr2 55368278 55369165 -197887418 + L1MA9 LINE L1 5268 6333 -1 23 0 0 0 chr2 55369543 55369566 -197887017 + AT_rich Low_complexity Low_complexity 1 23 0 1127 189 53 9 chr2 55371044 55371271 -197885312 + MLT1D LTR MaLR 5 241 -264 21 36 0 0 chr2 55371327 55371355 -197885228 + AT_rich Low_complexity Low_complexity 1 28 0 355 183 0 29 chr2 55371483 55371587 -197884996 + G-rich Low_complexity Low_complexity 5 105 0 402 301 5 64 chr2 55371589 55371792 -197884791 - MLT1B LTR MaLR -114 276 86 5679 93 2 12 chr2 55371795 55372597 -197883986 - L1PA10 LINE L1 0 6168 5375 444 186 139 0 chr2 55372597 55372683 -197883900 - MLT1B LTR MaLR -292 98 1 2720 244 30 89 chr2 55372684 55373045 -197883538 - MLT1B-int LTR MaLR -1 1370 989 2056 123 3 7 chr2 55373045 55373347 -197883236 + AluSx SINE Alu 1 301 -11 2720 244 30 89 chr2 55373347 55374056 -197882527 - MLT1B-int LTR MaLR -382 989 363 1776 204 47 158 chr2 55374059 55374105 -197882478 - LTR8A LTR ERV1 0 727 678 3107 88 18 20 chr2 55374105 55374550 -197882033 - MLT2A1 LTR ERVL 0 444 1 1776 204 47 158 chr2 55374550 55375283 -197881300 - LTR8A LTR ERV1 -49 678 34 256 200 57 0 chr2 55375297 55375367 -197881216 - MLT1B-int LTR MaLR -1006 365 292 383 156 91 0 chr2 55375381 55375458 -197881125 - MLT1B-int LTR MaLR -1622 113 30 1646 243 56 25 chr2 55375460 55375908 -197880675 - MLT2B1 LTR ERVL -58 462 1 1961 145 73 83 chr2 55376250 55376811 -197879772 - MER4B LTR ERV1 -10 769 1 419 200 18 55 chr2 55377703 55377813 -197878770 + MLT1H1 LTR MaLR 426 531 -24 224 250 0 31 chr2 55377878 55377942 -197878641 + GA-rich Low_complexity Low_complexity 5 66 0 346 285 11 89 chr2 55377942 55378121 -197878462 + MLT1K LTR MaLR 395 559 -29 1788 185 0 0 chr2 55378742 55379039 -197877544 + AluJo SINE Alu 1 297 -15 291 54 0 0 chr2 55379764 55379801 -197876782 + (CA)n Simple_repeat Simple_repeat 2 38 0 526 286 19 3 chr2 55379929 55380142 -197876441 + LTR16C LTR ERVL 214 491 0 23 54 0 0 chr2 55380262 55380299 -197876284 + AT_rich Low_complexity Low_complexity 1 37 0 25 31 0 0 chr2 55380473 55380505 -197876078 + AT_rich Low_complexity Low_complexity 1 32 0 207 300 0 0 chr2 55380756 55380806 -197875777 + (CATATA)n Simple_repeat Simple_repeat 2 51 0 2462 67 0 16 chr2 55381012 55381328 -197875255 - AluY SINE Alu 0 311 1 321 47 0 0 chr2 55383854 55383897 -197872686 + (CA)n Simple_repeat Simple_repeat 2 44 0 317 224 30 0 chr2 55384058 55384125 -197872458 - MLT1A1 LTR MaLR -80 285 217 1942 141 7 3 chr2 55384140 55384446 -197872137 - Tigger3(Golem) DNA MER2_type -1 3028 2722 1275 195 0 5 chr2 55384430 55384651 -197871932 - Tigger3(Golem) DNA MER2_type -2809 220 1 * 955 159 10 18 chr2 55384651 55384949 -197871634 - MLT2D LTR ERVL -43 362 1 1015 225 117 46 chr2 55385078 55385402 -197871181 - MLT1A1 LTR MaLR 0 365 19 1831 143 15 0 chr2 55385891 55386164 -197870419 + AluSx SINE Alu 3 279 -33 338 291 28 67 chr2 55386276 55386455 -197870128 + MER110-int LTR ERV1 2226 2397 -2250 879 224 5 52 chr2 55386828 55387020 -197869563 + MER20 DNA MER1_type 36 218 -1 198 0 0 0 chr2 55388076 55388098 -197868485 + (TAAAAA)n Simple_repeat Simple_repeat 2 23 0 21 36 0 0 chr2 55388170 55388198 -197868385 + AT_rich Low_complexity Low_complexity 1 28 0 199 54 54 0 chr2 55388741 55388778 -197867805 + (TATAA)n Simple_repeat Simple_repeat 2 40 0 202 355 0 0 chr2 55388871 55388933 -197867650 - L2 LINE L2 -15 3298 3237 307 324 116 35 chr2 55389308 55389592 -197866991 + L2 LINE L2 2411 2717 -597 5707 128 16 19 chr2 55389597 55390963 -197865620 + L1PA13 LINE L1 4784 6142 -21 2238 100 7 0 chr2 55391010 55391309 -197865274 + AluSx SINE Alu 4 304 -8 868 333 82 28 chr2 55391310 55391843 -197864740 + L2 LINE L2 2739 3309 -4 457 286 100 32 chr2 55392477 55392697 -197863886 + MIR SINE MIR 1 235 -27 27 62 0 0 chr2 55392792 55392840 -197863743 + AT_rich Low_complexity Low_complexity 1 48 0 1975 126 20 0 chr2 55393038 55393339 -197863244 - AluSx SINE Alu -5 307 1 638 253 72 23 chr2 55393358 55393623 -197862960 - L1MC4 LINE L1 0 8042 7765 1005 136 0 0 chr2 55393625 55393772 -197862811 - AluSg/x SINE Alu -12 300 154 760 224 133 8 chr2 55393773 55394028 -197862555 - L1MC4 LINE L1 -269 7773 7487 25 51 0 0 chr2 55394086 55394125 -197862458 + AT_rich Low_complexity Low_complexity 1 39 0 23 0 0 0 chr2 55395368 55395391 -197861192 + AT_rich Low_complexity Low_complexity 1 23 0 8951 37 2 7 chr2 55395452 55396528 -197860055 + MER11C LTR ERVK 1 1071 0 1744 156 17 0 chr2 55396560 55396849 -197859734 - MER84 LTR ERVI 0 507 214 * 1926 103 0 7 chr2 55396847 55397119 -197859464 - MER84 LTR ERVI -237 270 1 430 274 143 45 chr2 55397581 55397826 -197858757 - L2 LINE L2 -169 3144 2876 22 0 0 0 chr2 55399363 55399385 -197857198 + AT_rich Low_complexity Low_complexity 1 22 0 651 260 105 27 chr2 55400051 55400270 -197856313 + MIR SINE MIR 22 257 -5 359 211 115 0 chr2 55400293 55400397 -197856186 + L3 LINE CR1 901 1016 -561 260 371 54 12 chr2 55400790 55400957 -197855626 + L3 LINE CR1 1298 1471 -106 1333 287 95 13 chr2 55402017 55403169 -197853414 + L1ME3A LINE L1 2184 3400 -2815 264 327 37 0 chr2 55403237 55403344 -197853239 + L1ME3A LINE L1 3524 3634 -2581 1500 262 91 36 chr2 55403388 55403483 -197853100 + L1ME3A LINE L1 3754 3842 -2373 2245 91 20 0 chr2 55403483 55403781 -197852802 + AluSp SINE Alu 1 304 -9 1500 262 91 36 chr2 55403781 55404634 -197851949 + L1ME3A LINE L1 3842 4754 -1461 1006 186 130 30 chr2 55404647 55404986 -197851597 - Charlie1 DNA MER1_type -40 2721 2349 16045 154 76 3 chr2 55405114 55411501 -197845082 - L1PB1 LINE L1 -9 6858 1 702 168 0 0 chr2 55411535 55411654 -197844929 - AluSg/x SINE Alu -7 305 187 429 271 99 68 chr2 55411657 55412144 -197844439 + L1ME3A LINE L1 4807 5308 -907 631 259 19 13 chr2 55412150 55412367 -197844216 + L1ME3A LINE L1 5383 5601 -630 736 284 64 21 chr2 55412378 55412706 -197843877 + L1ME3A LINE L1 5656 5997 -242 271 287 271 6 chr2 55412769 55412950 -197843633 - MIR SINE MIR -10 252 24 299 328 101 0 chr2 55412964 55413083 -197843500 - MIR SINE MIR -54 208 78 1026 168 107 0 chr2 55415274 55415471 -197841112 + MER20 DNA MER1_type 2 219 0 1565 183 30 21 chr2 55415692 55416173 -197840410 + L1ME1 LINE L1 5095 5578 -588 273 202 21 64 chr2 55416179 55416273 -197840310 + L1ME1 LINE L1 5670 5759 -405 2798 226 73 6 chr2 55416278 55416959 -197839624 - MER50 LTR ERV1 -7 727 1 1216 225 26 59 chr2 55416962 55417385 -197839198 + L1ME1 LINE L1 5757 6165 -1 1164 279 117 37 chr2 55417981 55418601 -197837982 - L2 LINE L2 0 3313 2744 1097 233 105 120 chr2 55418601 55419203 -197837380 + MLT1E LTR MaLR 1 593 0 1164 279 117 37 chr2 55419203 55419569 -197837014 - L2 LINE L2 -569 2744 2160 261 0 0 0 chr2 55420376 55420405 -197836178 + (A)n Simple_repeat Simple_repeat 1 29 0 21 0 0 0 chr2 55421021 55421042 -197835541 + AT_rich Low_complexity Low_complexity 1 21 0 256 318 53 0 chr2 55422022 55422154 -197834429 - MIR SINE MIR -31 231 93 5755 148 27 13 chr2 55422184 55422369 -197834214 - L1MA7 LINE L1 0 6291 6110 2276 95 0 0 chr2 55422369 55422665 -197833918 + AluSc SINE Alu 1 296 -13 5755 148 27 13 chr2 55422665 55423664 -197832919 - L1MA7 LINE L1 -181 6110 5099 1200 157 195 42 chr2 55423714 55423850 -197832733 + AluSx SINE Alu 1 115 -187 187 54 54 0 chr2 55423850 55423887 -197832696 + (TA)n Simple_repeat Simple_repeat 1 39 0 1200 157 195 42 chr2 55423887 55424012 -197832571 + AluSx SINE Alu 115 302 0 225 0 0 0 chr2 55425216 55425241 -197831342 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 25 0 0 0 chr2 55425499 55425524 -197831059 + AT_rich Low_complexity Low_complexity 1 25 0 1522 220 142 69 chr2 55425720 55426398 -197830185 + LTR1B LTR ERV1 1 727 -99 259 116 0 23 chr2 55426396 55426439 -197830144 + LTR28 LTR ERV1 978 1019 -1 * 189 0 0 0 chr2 55427366 55427387 -197829196 + (TA)n Simple_repeat Simple_repeat 2 22 0 549 266 52 76 chr2 55427511 55427932 -197828651 + L1MEd LINE L1 777 1187 -5018 308 273 11 23 chr2 55427969 55428057 -197828526 - L2 LINE L2 -7 3306 3220 297 303 46 41 chr2 55428130 55428419 -197828164 + L1MEd LINE L1 1206 1504 -4711 840 271 119 60 chr2 55428427 55429007 -197827576 - L2 LINE L2 -2 3311 2706 1276 171 63 3 chr2 55429011 55429287 -197827296 + L1ME LINE L1 5542 5823 -343 1154 283 101 37 chr2 55429291 55430236 -197826347 + L1MEd LINE L1 1401 2405 -3991 213 337 10 50 chr2 55431473 55431574 -197825009 + MIR3 SINE MIR 94 190 -18 196 156 0 44 chr2 55431674 55431719 -197824864 - MIR SINE MIR -50 212 170 2321 148 5 18 chr2 55432100 55432486 -197824097 + MLT1B LTR MaLR 3 383 -7 330 273 11 0 chr2 55432533 55432621 -197823962 - MIR SINE MIR -80 128 40 3664 110 65 15 chr2 55432679 55433262 -197823321 + LTR9 LTR ERV1 1 612 0 308 285 30 42 chr2 55433678 55433843 -197822740 + HAL1 LINE L1 2302 2464 -43 2428 147 25 9 chr2 55435244 55435680 -197820903 - L1MA6 LINE L1 0 6300 5858 243 0 0 0 chr2 55436239 55436266 -197820317 + (T)n Simple_repeat Simple_repeat 1 27 0 26 0 0 0 chr2 55436768 55436794 -197819789 + AT_rich Low_complexity Low_complexity 1 26 0 300 285 123 35 chr2 55437203 55437431 -197819152 - L3 LINE CR1 -23 1554 1307 22 0 0 0 chr2 55437611 55437633 -197818950 + AT_rich Low_complexity Low_complexity 1 22 0 322 46 77 0 chr2 55437942 55438007 -197818576 + (TA)n Simple_repeat Simple_repeat 1 70 0 534 305 89 24 chr2 55438162 55438542 -197818041 - L1ME LINE L1 -503 5728 5324 609 325 66 38 chr2 55438564 55439200 -197817383 - L1ME LINE L1 -941 5274 4621 322 293 73 39 chr2 55439339 55439544 -197817039 - L1ME LINE L1 -3437 2778 2567 371 300 20 10 chr2 55439544 55439644 -197816939 + L2 LINE L2 3204 3304 -9 360 303 37 22 chr2 55439646 55439917 -197816666 - L1ME LINE L1 -3702 2513 2239 3629 159 16 16 chr2 55440118 55440803 -197815780 - L1MB3 LINE L1 -8 6175 5491 489 302 46 62 chr2 55441078 55441383 -197815200 - L1ME LINE L1 -898 1678 1333 1030 202 202 22 chr2 55442091 55442408 -197814175 + MLT1A2 LTR MaLR 1 374 0 4304 70 2 5 chr2 55442645 55443201 -197813382 + MER41A LTR ERV1 1 554 0 370 347 146 14 chr2 55443447 55443666 -197812917 - L3 LINE CR1 -1010 567 320 32 26 0 0 chr2 55444276 55444315 -197812268 + AT_rich Low_complexity Low_complexity 1 39 0 215 320 30 20 chr2 55444578 55444678 -197811905 - MIR SINE MIR -3 259 159 1510 222 123 10 chr2 55444683 55445098 -197811485 + MLT1C LTR MaLR 6 467 0 465 313 8 16 chr2 55445098 55445250 -197811333 - MIR SINE MIR -63 145 15 378 42 0 0 chr2 55445250 55445298 -197811285 + (TG)n Simple_repeat Simple_repeat 1 48 0 261 258 15 0 chr2 55445311 55445377 -197811206 + (CATATA)n Simple_repeat Simple_repeat 3 69 0 25 0 0 0 chr2 55446064 55446089 -197810494 + AT_rich Low_complexity Low_complexity 1 25 0 27264 63 5 14 chr2 55446092 55450277 -197806306 + L1PA8 LINE L1 2031 6172 0 594 267 92 18 chr2 55452616 55452833 -197803750 + MIR SINE MIR 20 252 -10 289 291 0 0 chr2 55453019 55453098 -197803485 + A-rich Low_complexity Low_complexity 1 79 0 1896 167 0 0 chr2 55453527 55453832 -197802751 + AluJo SINE Alu 1 305 -7 211 308 13 26 chr2 55454698 55454776 -197801807 - L2 LINE L2 -9 3263 3187 23 0 0 0 chr2 55454779 55454802 -197801781 + AT_rich Low_complexity Low_complexity 1 23 0 231 94 0 0 chr2 55454907 55454939 -197801644 + AluSx SINE Alu 1 32 -270 1708 174 0 33 chr2 55455502 55455807 -197800776 + AluJo SINE Alu 2 296 -16 2072 124 3 0 chr2 55455809 55456092 -197800491 + AluSx SINE Alu 1 284 -28 256 79 0 0 chr2 55456092 55456130 -197800453 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 266 326 68 37 chr2 55457324 55457514 -197799069 - L3 LINE CR1 -251 1326 1131 626 298 56 5 chr2 55458051 55458249 -197798334 - L3 LINE CR1 -472 1105 898 1713 152 84 79 chr2 55460085 55460479 -197796104 + MSTD LTR MaLR 1 396 0 1956 133 3 7 chr2 55461128 55461414 -197795169 + AluSx SINE Alu 11 295 -17 213 39 0 0 chr2 55462500 55462526 -197794057 + (A)n Simple_repeat Simple_repeat 1 26 0 279 281 45 0 chr2 55462689 55462778 -197793805 - MIR SINE MIR -14 248 156 23 0 0 0 chr2 55462788 55462811 -197793772 + AT_rich Low_complexity Low_complexity 1 23 0 299 275 134 6 chr2 55462936 55463092 -197793491 + MIR SINE MIR 34 206 -56 660 352 89 19 chr2 55463338 55464003 -197792580 - L2 LINE L2 -158 3155 2447 450 208 21 10 chr2 55466650 55466746 -197789837 - MER67D LTR ERV1 -108 406 310 766 188 4 115 chr2 55466888 55467122 -197789461 - MER67D LTR ERV1 -306 208 1 2247 89 0 0 chr2 55467536 55467816 -197788767 + AluSc SINE Alu 1 280 -29 342 205 0 0 chr2 55467830 55467913 -197788670 + (TA)n Simple_repeat Simple_repeat 2 84 0 2109 116 17 3 chr2 55469185 55469478 -197787105 - AluSg SINE Alu -13 297 1 223 217 181 12 chr2 55469485 55469568 -197787015 - L2 LINE L2 -16 3297 3201 552 198 40 106 chr2 55470165 55470392 -197786191 + MER58C DNA MER1_type 1 212 -3 271 251 199 41 chr2 55471231 55471402 -197785181 - MIR SINE MIR -64 198 1 1578 225 33 0 chr2 55473307 55473614 -197782969 + MER45B DNA AcHobo 5 321 -719 2405 185 68 102 chr2 55473926 55474652 -197781931 + MER45B DNA AcHobo 340 1040 0 201 237 0 0 chr2 55474723 55474761 -197781822 + (CGTG)n Simple_repeat Simple_repeat 1 38 0 37 39 0 0 chr2 55474819 55474870 -197781713 + AT_rich Low_complexity Low_complexity 1 51 0 222 355 174 0 chr2 55475632 55475787 -197780796 + MIR3 SINE MIR 10 191 -17 382 324 58 7 chr2 55476596 55476735 -197779848 + MER5A DNA MER1_type 43 188 -1 314 303 66 33 chr2 55476935 55477087 -197779496 + MER5B DNA MER1_type 1 157 -21 1197 225 24 83 chr2 55477625 55477674 -197778909 + MLT1A2 LTR MaLR 1 51 -323 2211 106 21 63 chr2 55477674 55478052 -197778531 - THE1B LTR MaLR 0 364 3 1197 225 24 83 chr2 55478052 55478376 -197778207 + MLT1A2 LTR MaLR 51 352 -22 2492 230 12 0 chr2 55478442 55478955 -197777628 + LTR53 LTR ERVL 1 519 0 537 306 50 27 chr2 55479859 55480081 -197776502 + MIR SINE MIR 28 254 -8 329 291 128 64 chr2 55480164 55480305 -197776278 - MIR3 SINE MIR -26 182 33 6269 142 16 30 chr2 55480623 55482070 -197774513 + L1MA3 LINE L1 4862 6305 0 21 0 0 0 chr2 55482083 55482104 -197774479 + AT_rich Low_complexity Low_complexity 1 21 0 190 276 69 83 chr2 55484410 55484555 -197772028 + L2 LINE L2 2948 3090 -182 263 303 58 100 chr2 55486588 55487255 -197769328 + L2 LINE L2 1755 2393 -921 874 204 6 6 chr2 55487339 55487506 -197769077 + FRAM SINE Alu 1 164 -12 195 42 0 0 chr2 55487512 55487536 -197769047 + (TA)n Simple_repeat Simple_repeat 1 24 0 4704 141 40 6 chr2 55487545 55488361 -197768222 + L1PB4 LINE L1 5310 6153 -3 284 326 68 71 chr2 55488412 55488722 -197767861 + L2 LINE L2 2619 2927 -387 771 229 6 33 chr2 55489433 55489616 -197766967 - MIR SINE MIR -15 247 70 6237 89 17 0 chr2 55489621 55490908 -197765675 + L1PA13 LINE L1 4843 6144 -19 30 27 0 0 chr2 55491378 55491415 -197765168 + AT_rich Low_complexity Low_complexity 1 37 0 326 362 0 0 chr2 55491997 55492113 -197764470 - MIR SINE MIR -112 150 35 305 364 15 30 chr2 55492748 55492880 -197763703 - L2 LINE L2 -2 3270 3141 234 91 0 0 chr2 55493398 55493431 -197763152 + (A)n Simple_repeat Simple_repeat 1 33 0 208 246 46 31 chr2 55496339 55496404 -197760179 + MIR3 SINE MIR 143 208 0 25 0 0 0 chr2 55496612 55496637 -197759946 + AT_rich Low_complexity Low_complexity 1 25 0 256 286 34 68 chr2 55496718 55496924 -197759659 - L1MC5 LINE L1 -801 7160 6962 * 5827 101 9 0 chr2 55496919 55497735 -197758848 - L1PA8 LINE L1 -8 6164 5342 * 12710 172 16 28 chr2 55497731 55501317 -197755266 - L1P3 LINE L1 -2839 3622 2 1155 249 29 13 chr2 55501337 55501646 -197754937 - L1MC4 LINE L1 -958 7084 6771 351 231 276 13 chr2 55501931 55502242 -197754341 - L1MC4a LINE L1 -1474 6334 5942 447 294 36 40 chr2 55502684 55502936 -197753647 - HAL1b LINE L1 -725 623 373 314 319 49 53 chr2 55502940 55503203 -197753380 - HAL1b LINE L1 -1033 315 54 1214 184 89 78 chr2 55503251 55503621 -197752962 + MLT1B LTR MaLR 1 374 -16 240 163 0 0 chr2 55504486 55504529 -197752054 + CT-rich Low_complexity Low_complexity 1 43 0 31 0 0 0 chr2 55506141 55506172 -197750411 + AT_rich Low_complexity Low_complexity 1 31 0 201 346 85 8 chr2 55506246 55506376 -197750207 - L2 LINE L2 -574 2740 2601 231 365 131 0 chr2 55507436 55507581 -197749002 + L2 LINE L2 3087 3250 -22 260 240 53 53 chr2 55507638 55507713 -197748870 + L2 LINE L2 3158 3232 -40 214 254 0 16 chr2 55508168 55508231 -197748352 + (CA)n Simple_repeat Simple_repeat 1 62 0 362 217 137 147 chr2 55509501 55509740 -197746843 + L2 LINE L2 3010 3247 -66 1642 166 54 0 chr2 55509740 55510017 -197746566 + AluSx SINE Alu 1 292 -20 362 217 137 147 chr2 55510017 55510076 -197746507 + L2 LINE L2 3247 3305 -8 779 257 63 17 chr2 55512427 55512664 -197743919 + L2 LINE L2 574 821 -2493 26 30 0 0 chr2 55512701 55512734 -197743849 + AT_rich Low_complexity Low_complexity 1 33 0 2070 176 19 3 chr2 55513141 55513500 -197743083 - MLT1A1 LTR MaLR 0 365 1 1939 132 62 17 chr2 55513881 55514236 -197742347 + THE1C LTR MaLR 1 371 -4 308 235 136 86 chr2 55515674 55515836 -197740747 - MIR3 SINE MIR -9 199 30 24 0 0 0 chr2 55516240 55516264 -197740319 + AT_rich Low_complexity Low_complexity 1 24 0 705 211 174 0 chr2 55516584 55516774 -197739809 - MER58A DNA MER1_type -1 223 1 426 258 92 33 chr2 55516783 55517023 -197739560 - MER112 DNA MER1_type -1 255 2 14659 134 17 20 chr2 55519731 55522156 -197734427 + Tigger1 DNA MER2_type 1 2418 0 415 280 103 33 chr2 55522263 55522592 -197733991 + L1M4 LINE L1 4468 4819 -1327 388 329 106 17 chr2 55522593 55522830 -197733753 - L1ME3A LINE L1 -224 5946 5689 344 309 161 21 chr2 55522909 55523145 -197733438 - L1ME3A LINE L1 -577 5585 5317 476 303 98 26 chr2 55523363 55523627 -197732956 - L1ME3 LINE L1 -217 5945 5663 421 277 97 36 chr2 55523806 55524384 -197732199 - L1M2 LINE L1 -773 5373 4806 334 324 68 7 chr2 55524834 55524982 -197731601 - L1MEc LINE L1 -4642 1754 1598 233 191 103 15 chr2 55525204 55525272 -197731311 - MER50 LTR ERV1 -574 160 87 352 301 142 6 chr2 55526126 55526309 -197730274 - MLT1K LTR MaLR -4 584 377 340 257 0 27 chr2 55526339 55526413 -197730170 - MLT1K LTR MaLR -363 225 154 2315 100 0 0 chr2 55528275 55528576 -197728007 - AluSg SINE Alu -9 301 1 4086 133 12 21 chr2 55528992 55529669 -197726914 + L1PA15 LINE L1 5495 6165 0 21 0 0 0 chr2 55529669 55529690 -197726893 + AT_rich Low_complexity Low_complexity 1 21 0 187 273 68 0 chr2 55529943 55529987 -197726596 + L2 LINE L2 3226 3272 0 229 228 25 0 chr2 55530108 55530187 -197726396 + (TA)n Simple_repeat Simple_repeat 1 81 0 201 179 0 0 chr2 55531296 55531335 -197725248 - L2 LINE L2 -5 3308 3270 181 366 43 21 chr2 55532905 55532998 -197723585 + MIR3 SINE MIR 10 104 -104 2207 140 22 6 chr2 55533410 55533768 -197722815 + THE1B LTR MaLR 1 364 0 1508 238 44 79 chr2 55534148 55534400 -197722183 - MLT1F1 LTR MaLR 0 567 308 2457 74 15 0 chr2 55534400 55534737 -197721846 - L1PA7 LINE L1 -1 6153 5812 1508 238 44 79 chr2 55534737 55534856 -197721727 - MLT1F1 LTR MaLR -259 308 186 282 29 0 0 chr2 55534856 55534891 -197721692 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 1508 238 44 79 chr2 55534891 55535074 -197721509 - MLT1F1 LTR MaLR -381 186 8 1464 167 4 50 chr2 55536391 55536672 -197719911 - AluJo SINE Alu -21 291 24 406 237 172 12 chr2 55536821 55536990 -197719593 + MLT1J2 LTR MaLR 1 196 -254 511 282 68 36 chr2 55537328 55537580 -197719003 - MIR SINE MIR 0 262 3 2167 126 0 3 chr2 55537772 55538082 -197718501 + AluSg SINE Alu 1 309 -1 1638 181 0 44 chr2 55538094 55538415 -197718168 + AluJo SINE Alu 3 309 -3 299 233 60 43 chr2 55538927 55539043 -197717540 - MIR3 SINE MIR -10 198 81 2041 101 42 3 chr2 55539702 55539989 -197716594 + AluSc SINE Alu 1 298 -11 1716 230 0 13 chr2 55540244 55540412 -197716171 + MLT1A2 LTR MaLR 1 170 -204 2189 105 7 0 chr2 55540412 55540706 -197715877 + AluSx SINE Alu 1 296 -16 1716 230 0 13 chr2 55540706 55540916 -197715667 + MLT1A2 LTR MaLR 170 374 0 482 303 92 16 chr2 55541976 55542161 -197714422 + MIR SINE MIR 30 228 -34 932 57 81 0 chr2 55542172 55542295 -197714288 - LTR12 LTR ERV1 0 714 582 4430 128 76 47 chr2 55542296 55543098 -197713485 - LTR12 LTR ERV1 -1 825 1 396 191 80 80 chr2 55543246 55543471 -197713112 - pTR5 LTR ERV1 -1473 965 741 261 274 116 0 chr2 55545227 55545322 -197711261 - MLT1I LTR MaLR -8 401 296 226 319 133 0 chr2 55545436 55545549 -197711034 - MLT1I LTR MaLR -271 138 11 386 182 13 0 chr2 55545964 55546041 -197710542 + MER53 DNA DNA 1 78 -111 2367 105 14 8 chr2 55546050 55546403 -197710180 - THE1A LTR MaLR 0 355 1 11344 94 22 2 chr2 55546408 55547945 -197708638 - THE1A-int LTR MaLR -12 1568 1 2355 116 8 8 chr2 55547945 55548300 -197708283 - THE1A LTR MaLR 0 355 1 436 170 80 0 chr2 55548321 55548421 -197708162 + MER53 DNA DNA 82 189 0 260 223 164 47 chr2 55548880 55549136 -197707447 + L1M4 LINE L1 4285 4570 -1576 576 211 8 30 chr2 55549338 55549471 -197707112 - MER45 DNA AcHobo -1414 167 38 1128 285 144 45 chr2 55549583 55550660 -197705923 + HAL1 LINE L1 734 1916 -591 20959 174 29 23 chr2 55550952 55556878 -197699705 + L1PA13 LINE L1 845 7598 -3 318 293 85 73 chr2 55557088 55557334 -197699249 + HAL1 LINE L1 2256 2504 -3 257 208 14 0 chr2 55557542 55557614 -197698969 + (TA)n Simple_repeat Simple_repeat 1 73 0 216 0 0 0 chr2 55558871 55558895 -197697688 + (A)n Simple_repeat Simple_repeat 1 24 0 311 363 112 34 chr2 55558909 55559656 -197696927 + L2 LINE L2 1279 2084 -1230 1092 159 4 88 chr2 55559791 55560030 -197696553 - MER20 DNA MER1_type 0 219 1 279 341 104 30 chr2 55560341 55560505 -197696078 + MER5A DNA MER1_type 13 188 -1 2039 183 73 0 chr2 55561010 55561409 -197695174 - MSTA LTR MaLR 0 428 1 492 281 124 36 chr2 55561669 55562000 -197694583 + MLT1J2 LTR MaLR 67 426 -24 42 36 0 0 chr2 55562018 55562074 -197694509 + AT_rich Low_complexity Low_complexity 1 56 0 5531 144 32 27 chr2 55562215 55562525 -197694058 + L1MA8 LINE L1 5057 5364 -927 2023 128 3 0 chr2 55562525 55562814 -197693769 + AluSq SINE Alu 1 290 -23 5531 144 32 27 chr2 55562814 55563728 -197692855 + L1MA8 LINE L1 5364 6286 -5 299 325 88 57 chr2 55564195 55564389 -197692194 - L2 LINE L2 -194 3078 2879 2044 243 55 28 chr2 55564620 55565197 -197691386 - MLT1E LTR MaLR 0 593 1 21 36 0 0 chr2 55565317 55565345 -197691238 + AT_rich Low_complexity Low_complexity 1 28 0 203 245 41 0 chr2 55565646 55565695 -197690888 - L2 LINE L2 -1 3312 3262 23 33 0 0 chr2 55565715 55565745 -197690838 + AT_rich Low_complexity Low_complexity 1 30 0 1777 217 139 12 chr2 55565882 55566394 -197690189 - MER119 DNA MER1_type 0 583 7 920 88 0 0 chr2 55567386 55567511 -197689072 - AluY SINE Alu 0 311 187 332 303 8 38 chr2 55567999 55568131 -197688452 + MIR SINE MIR 16 143 -65 2344 87 0 0 chr2 55568141 55568441 -197688142 + AluY SINE Alu 1 300 -11 240 200 0 0 chr2 55568775 55568825 -197687758 + (CGAG)n Simple_repeat Simple_repeat 2 51 0 2205 139 31 0 chr2 55569077 55569430 -197687153 + THE1B LTR MaLR 1 364 0 24 0 0 0 chr2 55569844 55569868 -197686715 + AT_rich Low_complexity Low_complexity 1 24 0 1682 166 17 55 chr2 55569948 55570309 -197686274 - MER7A DNA MER2_type 0 346 2 22 0 0 0 chr2 55572569 55572591 -197683992 + AT_rich Low_complexity Low_complexity 1 22 0 1966 155 29 23 chr2 55573991 55574333 -197682250 + MER7A DNA MER2_type 5 346 0 2151 158 69 5 chr2 55574843 55575235 -197681348 - MER47B DNA MER2_type 0 418 2 580 253 68 63 chr2 55575355 55575592 -197680991 + L2 LINE L2 3076 3313 0 181 194 0 0 chr2 55575610 55575641 -197680942 + L2 LINE L2 2600 2630 -684 389 242 148 61 chr2 55575642 55575995 -197680588 + MLT1J2 LTR MaLR 41 446 0 526 312 167 57 chr2 55576000 55576547 -197680036 + L2 LINE L2 2652 3270 -43 11883 149 26 51 chr2 55576602 55577661 -197678922 + L1MA2 LINE L1 2607 3691 -2613 2036 112 0 7 chr2 55577661 55577930 -197678653 + AluSc SINE Alu 3 269 -40 11883 149 26 51 chr2 55577930 55580665 -197675918 + L1MA2 LINE L1 3691 6304 0 231 226 170 0 chr2 55580714 55580820 -197675763 + L1ME4a LINE L1 5989 6112 -9 1726 54 13 0 chr2 55580921 55581145 -197675438 - L1P2 LINE L1 -601 5553 5327 * 1965 39 0 0 chr2 55581144 55581377 -197675206 + L1P2 LINE L1 5549 5781 -373 238 88 0 0 chr2 55581368 55581402 -197675181 + L1PA3 LINE L1 4046 4079 -2067 * 11252 32 0 0 chr2 55581402 55583516 -197673067 + L1PA3 LINE L1 4039 6152 -3 3086 47 3 3 chr2 55583533 55583909 -197672674 + L1PA5 LINE L1 5770 6148 -6 245 39 78 0 chr2 55583909 55583960 -197672623 + (TA)n Simple_repeat Simple_repeat 1 55 0 21 82 0 0 chr2 55584327 55584376 -197672207 + AT_rich Low_complexity Low_complexity 1 49 0 251 203 27 54 chr2 55584422 55584496 -197672087 - MER20B DNA MER1_type -190 593 522 386 320 32 8 chr2 55584791 55584916 -197671667 - MER20B DNA MER1_type -585 198 71 821 247 4 37 chr2 55584917 55585188 -197671395 - MER20B DNA MER1_type -7 776 515 1560 117 0 9 chr2 55585452 55585698 -197670885 + AluSg/x SINE Alu 72 315 0 259 323 45 15 chr2 55585735 55585868 -197670715 - MER20B DNA MER1_type -611 172 36 290 317 49 8 chr2 55586035 55586158 -197670425 + L2 LINE L2 3186 3313 0 26 0 0 0 chr2 55586217 55586243 -197670340 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr2 55586445 55586473 -197670110 + AT_rich Low_complexity Low_complexity 1 28 0 233 135 58 0 chr2 55586663 55586715 -197669868 - L1MC3 LINE L1 -155 7630 7576 3405 179 103 6 chr2 55586733 55587076 -197669507 - L1MC3 LINE L1 -533 7252 6944 188 83 0 28 chr2 55587076 55587112 -197669471 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 3405 179 103 6 chr2 55587112 55587485 -197669098 - L1MC3 LINE L1 -841 6944 6466 545 306 51 10 chr2 55587907 55588103 -197668480 - MIR SINE MIR 0 262 59 2454 135 0 3 chr2 55588242 55588628 -197667955 - L1PA16 LINE L1 -9 6157 5773 2670 97 8 0 chr2 55588839 55589200 -197667383 + THE1B LTR MaLR 1 364 0 680 208 107 7 chr2 55590405 55590554 -197666029 + MER3 DNA MER1_type 44 207 -2 229 139 0 0 chr2 55590707 55590743 -197665840 - L2 LINE L2 -5 3308 3273 2325 109 0 0 chr2 55590821 55591132 -197665451 + AluSq SINE Alu 1 311 -2 623 170 80 2 chr2 55592220 55592431 -197664152 - MLT1C LTR MaLR 0 467 204 1544 22 0 0 chr2 55592436 55592617 -197663966 + L1PA2 LINE L1 5975 6155 0 5705 129 34 21 chr2 55592621 55593657 -197662926 + L1MA8 LINE L1 4790 5851 -440 2097 88 26 0 chr2 55593657 55593929 -197662654 + AluY SINE Alu 1 279 -32 5705 129 34 21 chr2 55593929 55594370 -197662213 + L1MA8 LINE L1 5851 6285 -6 22 0 0 0 chr2 55594370 55594392 -197662191 + AT_rich Low_complexity Low_complexity 1 22 0 215 200 0 0 chr2 55594561 55594601 -197661982 - MIR SINE MIR -14 248 209 212 246 14 0 chr2 55595130 55595199 -197661384 + CT-rich Low_complexity Low_complexity 3 72 0 249 33 0 0 chr2 55595200 55595230 -197661353 + (CA)n Simple_repeat Simple_repeat 1 30 0 2095 130 0 3 chr2 55595404 55595697 -197660886 + AluSx SINE Alu 1 292 -20 518 259 0 9 chr2 55595753 55595869 -197660714 + L2 LINE L2 3199 3313 0 2777 163 15 93 chr2 55596004 55596605 -197659978 - MLT2B3 LTR ERVL 0 554 1 1996 142 7 0 chr2 55597033 55597513 -197659070 + AluSx SINE Alu 1 482 0 186 191 0 0 chr2 55597510 55597552 -197659031 + GA-rich Low_complexity Low_complexity 2 43 0 388 203 8 34 chr2 55598962 55599079 -197657504 + MLT1J LTR MaLR 18 166 -323 400 246 42 34 chr2 55599093 55599240 -197657343 + MER21B LTR ERV1 13 198 -407 1212 258 81 34 chr2 55599260 55599801 -197656782 + MER21B LTR ERV1 123 739 -124 754 283 39 31 chr2 55599876 55600134 -197656449 + MLT1J LTR MaLR 198 457 -54 324 328 39 35 chr2 55600633 55600892 -197655691 - MIR SINE MIR 0 262 3 1350 272 58 55 chr2 55601116 55601663 -197654920 + MLT1H1 LTR MaLR 5 553 -2 264 227 47 62 chr2 55602285 55602413 -197654170 - LTR67 LTR ERVL 0 557 432 4129 93 16 0 chr2 55602893 55603473 -197653110 - L1PA13 LINE L1 -5 6158 5570 2384 259 179 121 chr2 55603515 55604293 -197652290 + L2 LINE L2 138 870 -2443 1523 155 6 5 chr2 55604293 55604597 -197651986 - MER46B DNA MER2_type 0 236 1 2384 259 179 121 chr2 55604597 55605801 -197650782 + L2 LINE L2 870 2003 -1310 962 164 62 0 chr2 55605801 55605978 -197650605 + MER5A DNA MER1_type 2 189 0 2384 259 179 121 chr2 55605978 55606414 -197650169 + L2 LINE L2 2003 2413 -900 5778 43 14 7 chr2 55606414 55607116 -197649467 - SVA Other Other 0 1386 680 2384 259 179 121 chr2 55607116 55607379 -197649204 + L2 LINE L2 2413 3275 -38 2140 196 43 20 chr2 55607907 55608396 -197648187 + MLT1D LTR MaLR 1 500 -5 3559 159 71 16 chr2 55609583 55610257 -197646326 + MER50 LTR ERV1 1 711 -23 349 248 20 13 chr2 55610362 55610386 -197646197 + (TA)n Simple_repeat Simple_repeat 1 23 -127 2256 79 0 0 chr2 55610386 55610666 -197645917 + AluY SINE Alu 26 305 -6 349 248 20 13 chr2 55610666 55610790 -197645793 + (TA)n Simple_repeat Simple_repeat 23 150 0 1522 268 84 63 chr2 55611035 55611415 -197645168 + MLT1G1 LTR MaLR 13 384 -211 1376 106 65 18 chr2 55611415 55611632 -197644951 + MER30 DNA MER1_type 4 230 0 1522 268 84 63 chr2 55611632 55611794 -197644789 + MLT1G1 LTR MaLR 384 570 -25 2128 131 15 15 chr2 55611794 55612131 -197644452 - MER1B DNA MER1_type 0 337 1 1522 268 84 63 chr2 55612131 55612158 -197644425 + MLT1G1 LTR MaLR 570 595 0 677 110 79 146 chr2 55612244 55612408 -197644175 + MER21A LTR ERV1 13 165 -766 1431 187 71 4 chr2 55613105 55613373 -197643210 + AluJb SINE Alu 1 286 -26 281 306 82 52 chr2 55613457 55613921 -197642662 + HAL1b LINE L1 60 537 -811 26 50 0 0 chr2 55614292 55614332 -197642251 + AT_rich Low_complexity Low_complexity 1 40 0 329 243 130 29 chr2 55614415 55614654 -197641929 + L1M4 LINE L1 2889 3151 -2995 282 304 28 33 chr2 55614648 55614975 -197641608 + L1P LINE L1 2135 2465 -3681 * 32 26 0 0 chr2 55615195 55615234 -197641349 + AT_rich Low_complexity Low_complexity 1 39 0 225 247 39 13 chr2 55615324 55615401 -197641182 + L1 LINE L1 2965 3043 -3103 338 285 95 47 chr2 55615450 55615703 -197640880 + L1 LINE L1 3161 3425 -2721 1858 260 135 31 chr2 55615761 55617073 -197639510 + L1M4 LINE L1 2497 3944 -2202 1278 152 117 42 chr2 55617086 55617395 -197639188 - THE1C LTR MaLR -43 332 1 286 245 59 29 chr2 55617431 55617533 -197639050 + L1M4 LINE L1 3974 4078 -2068 424 321 49 0 chr2 55617563 55617725 -197638858 + L2 LINE L2 2151 2320 -994 1146 276 115 34 chr2 55617746 55618517 -197638066 + L2 LINE L2 2465 3313 0 27 29 0 0 chr2 55618758 55618792 -197637791 + AT_rich Low_complexity Low_complexity 1 34 0 1900 144 16 7 chr2 55618792 55619098 -197637485 + AluSx SINE Alu 1 309 -3 1092 252 153 5 chr2 55619301 55619706 -197636877 - L1ME2 LINE L1 -9 6155 5691 4427 195 36 42 chr2 55619708 55620268 -197636315 - L1MB8 LINE L1 0 6178 5616 742 100 0 0 chr2 55620268 55620378 -197636205 - L1PB1 LINE L1 -1 6150 6041 4427 195 36 42 chr2 55620378 55621835 -197634748 - L1MB8 LINE L1 -562 5616 4171 1512 271 50 41 chr2 55621852 55622306 -197634277 - L1ME2 LINE L1 -473 5691 5243 2322 81 0 0 chr2 55622306 55622601 -197633982 + AluY SINE Alu 1 295 -16 1512 271 50 41 chr2 55622601 55623134 -197633449 - L1ME2 LINE L1 -921 5243 4692 1768 125 21 0 chr2 55623153 55623441 -197633142 - L1MA6 LINE L1 -3 6297 6004 247 127 48 79 chr2 55623449 55623512 -197633071 + L1MA4 LINE L1 5297 5357 -943 3175 109 11 4 chr2 55623520 55623988 -197632595 - L1PA13 LINE L1 -50 6113 5643 9989 168 17 21 chr2 55624095 55625055 -197631528 - L1PA13 LINE L1 -520 5648 4685 2322 100 0 3 chr2 55625055 55625365 -197631218 + AluY SINE Alu 1 309 -2 9989 168 17 21 chr2 55625365 55626653 -197629930 - L1PA13 LINE L1 -1483 4685 3415 4617 145 95 1 chr2 55626656 55627527 -197629056 + L1MA4 LINE L1 5343 6295 -5 1898 139 7 105 chr2 55627522 55627940 -197628643 + L1MA7 LINE L1 5601 5977 -314 * 1655 263 89 39 chr2 55627933 55629047 -197627536 - L1 LINE L1 -1424 4722 3542 * 268 292 175 13 chr2 55629092 55629246 -197627337 - L1MEc LINE L1 -6138 258 80 35 0 0 0 chr2 55629306 55629341 -197627242 + AT_rich Low_complexity Low_complexity 1 35 0 5944 149 23 12 chr2 55630269 55631979 -197624604 - L1MA4 LINE L1 -1 6299 4570 888 159 6 6 chr2 55631976 55632146 -197624437 - L1MA4 LINE L1 -2325 3821 3652 * 1709 285 100 53 chr2 55634307 55635600 -197620983 + HAL1 LINE L1 604 1956 -551 21 57 0 0 chr2 55635603 55635638 -197620945 + AT_rich Low_complexity Low_complexity 1 35 0 1383 134 4 60 chr2 55635693 55635961 -197620622 - L1MA5 LINE L1 -1 6299 6047 3147 169 43 2 chr2 55636043 55636628 -197619955 - L1MA5 LINE L1 -248 6052 5444 1050 167 10 10 chr2 55636620 55636818 -197619765 + L1PBa LINE L1 3 200 -6663 * 2040 112 9 25 chr2 55636818 55637139 -197619444 + L1PBa LINE L1 634 949 -5914 29 90 0 0 chr2 55637444 55637522 -197619061 + AT_rich Low_complexity Low_complexity 1 78 0 3161 205 4 10 chr2 55637611 55638312 -197618271 + L1 LINE L1 4271 4967 -1179 5035 35 0 0 chr2 55638334 55638938 -197617645 - L1PA3 LINE L1 0 6155 5552 976 286 63 26 chr2 55638956 55639463 -197617120 + L1ME3A LINE L1 5425 5950 -220 4270 134 25 91 chr2 55639681 55641168 -197615415 + pTR5 LTR ERV1 743 2606 0 2261 100 0 0 chr2 55641199 55641498 -197615085 + AluSp SINE Alu 2 300 -13 241 292 139 0 chr2 55642019 55642091 -197614492 + L2 LINE L2 3232 3313 0 582 168 25 0 chr2 55642559 55642678 -197613905 - L1MB7 LINE L1 -12 6670 6549 2043 211 45 24 chr2 55642685 55644419 -197612164 - L1MB7 LINE L1 -321 6361 4458 902 202 122 4 chr2 55644423 55644685 -197611898 - L1MB7 LINE L1 -2081 4563 4271 535 304 102 52 chr2 55644676 55645193 -197611390 - L1MB7 LINE L1 -5986 556 14 * 193 222 0 0 chr2 55645340 55645385 -197611198 - L2 LINE L2 0 3313 3269 628 314 38 8 chr2 55646535 55646796 -197609787 - MLT1L LTR MaLR 0 615 347 237 283 50 25 chr2 55647356 55647476 -197609107 + L1ME LINE L1 5570 5692 -429 2429 118 27 0 chr2 55647504 55647869 -197608714 - THE1C LTR MaLR 0 375 1 246 296 61 31 chr2 55648331 55648429 -197608154 - MIR SINE MIR -110 152 52 2270 97 0 0 chr2 55649382 55649672 -197606911 + AluSg SINE Alu 5 294 -16 854 223 44 18 chr2 55651020 55651249 -197605334 - MLT1C LTR MaLR -46 421 187 364 285 169 20 chr2 55652081 55652525 -197604058 + L1MC/D LINE L1 5296 5790 -331 1483 189 35 21 chr2 55652658 55652944 -197603639 + AluJo SINE Alu 1 290 -22 198 0 0 0 chr2 55654896 55654918 -197601665 + (A)n Simple_repeat Simple_repeat 1 22 0 2295 98 0 7 chr2 55654918 55655223 -197601360 + AluSg SINE Alu 1 303 -7 890 144 0 8 chr2 55655824 55655956 -197600627 + FLAM_C SINE Alu 1 131 -12 180 0 0 0 chr2 55656243 55656263 -197600320 + (TTG)n Simple_repeat Simple_repeat 2 21 0 294 234 65 13 chr2 55658036 55658113 -197598470 + MIR SINE MIR 29 109 -99 213 293 167 23 chr2 55658354 55658528 -197598055 - L2 LINE L2 -18 3295 3097 2010 147 10 0 chr2 55658579 55658891 -197597692 - L1PA13 LINE L1 -1907 4239 3925 * 6192 110 2 28 chr2 55658887 55660952 -197595631 + L1PA13 LINE L1 4228 6144 -19 1003 233 18 5 chr2 55660961 55661180 -197595403 + MIR SINE MIR 20 241 -21 1977 121 16 13 chr2 55661820 55662126 -197594457 - AluSx SINE Alu -5 307 1 4616 201 98 28 chr2 55662855 55663032 -197593551 - Charlie1a DNA MER1_type -1576 1185 1022 3169 131 27 2 chr2 55663032 55663513 -197593070 + LTR42 LTR ERVL 3 495 0 4616 201 98 28 chr2 55663513 55664442 -197592141 - Charlie1a DNA MER1_type -1739 1022 1 180 0 0 0 chr2 55664546 55664566 -197592017 + (A)n Simple_repeat Simple_repeat 1 20 0 183 200 29 0 chr2 55665084 55665119 -197591464 + L2 LINE L2 3188 3223 -90 26 0 0 0 chr2 55665139 55665165 -197591418 + AT_rich Low_complexity Low_complexity 1 26 0 551 154 32 41 chr2 55665241 55665364 -197591219 + MLT1C LTR MaLR 1 122 -345 243 306 120 6 chr2 55665652 55665835 -197590748 + L1M4 LINE L1 4126 4329 -1817 * 4271 180 25 1 chr2 55665834 55666627 -197589956 + L1MB2 LINE L1 5358 6169 -2 263 149 0 0 chr2 55666672 55666719 -197589864 + L1ME3 LINE L1 5908 5954 -216 301 257 35 56 chr2 55666754 55666898 -197589685 + L1ME3 LINE L1 5934 6074 -88 271 374 38 15 chr2 55667219 55667350 -197589233 - L2 LINE L2 -5 3267 3134 329 298 21 50 chr2 55667749 55667890 -197588693 + MIR3 SINE MIR 69 205 -3 238 387 60 0 chr2 55668130 55668280 -197588303 - MIR SINE MIR -43 219 61 1542 36 10 0 chr2 55668922 55669114 -197587469 + L1PA4 LINE L1 5961 6154 -1 760 207 0 7 chr2 55669314 55669464 -197587119 - MER5A DNA MER1_type 0 189 41 673 307 17 42 chr2 55669716 55669954 -197586629 - MIR SINE MIR -10 252 21 7082 101 9 28 chr2 55670613 55671704 -197584879 - MER11C LTR ERVK 0 1071 1 252 0 0 0 chr2 55672174 55672202 -197584381 + (A)n Simple_repeat Simple_repeat 1 28 0 23 0 0 0 chr2 55672503 55672526 -197584057 + AT_rich Low_complexity Low_complexity 1 23 0 2706 243 64 61 chr2 55673058 55674481 -197582102 + L1MDa LINE L1 20 1619 -4921 3210 113 23 2 chr2 55674482 55674959 -197581624 + LTR15 LTR ERV1 1 487 -6 1962 180 41 0 chr2 55674979 55675395 -197581188 + L1MDa LINE L1 1621 2053 -4487 1383 216 27 106 chr2 55675412 55675857 -197580726 + MLT1D-int LTR MaLR 962 1371 0 1803 238 27 49 chr2 55675857 55676369 -197580214 + MLT1D LTR MaLR 1 501 -4 911 180 84 24 chr2 55676378 55676628 -197579955 + L1MDa LINE L1 2077 2341 -4199 264 30 0 0 chr2 55676672 55676705 -197579878 + (TA)n Simple_repeat Simple_repeat 2 34 0 9830 228 50 20 chr2 55676706 55680312 -197576271 + L1MDa LINE L1 2342 6037 -599 3771 162 39 4 chr2 55680312 55681033 -197575550 + L1MB2 LINE L1 5419 6164 -7 742 199 21 47 chr2 55681194 55681591 -197574992 + MER4C LTR ERV1 149 435 -30 207 0 0 0 chr2 55681980 55682003 -197574580 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 9007 16 0 0 chr2 55682048 55683082 -197573501 - L1HS LINE L1 -1150 4996 3963 7977 11 0 1 chr2 55683081 55684256 -197572327 + L1HS LINE L1 4982 6155 0 * 23 33 0 0 chr2 55684261 55684291 -197572292 + AT_rich Low_complexity Low_complexity 1 30 0 1861 274 76 40 chr2 55685214 55686241 -197570342 - L2 LINE L2 0 3313 2259 205 382 53 34 chr2 55686405 55686612 -197569971 + L2 LINE L2 2683 2893 -421 308 269 37 90 chr2 55686761 55686792 -197569791 + L2 LINE L2 3146 3177 -95 1720 192 99 32 chr2 55686792 55687265 -197569318 - MLT1D LTR MaLR 0 505 1 308 269 37 90 chr2 55687265 55687367 -197569216 + L2 LINE L2 3177 3272 0 2134 203 56 34 chr2 55687436 55687974 -197568609 + MER44D DNA MER2_type 1 605 0 1496 262 40 19 chr2 55688500 55688923 -197567660 + MLT1J LTR MaLR 80 511 0 1011 247 40 4 chr2 55689051 55689302 -197567281 - MLT1G1 LTR MaLR -317 278 19 1274 274 89 13 chr2 55689859 55690333 -197566250 + MLT1J LTR MaLR 2 511 0 535 297 8 8 chr2 55691200 55691328 -197565255 + L2 LINE L2 3141 3268 -4 216 0 0 0 chr2 55691566 55691590 -197564993 + (A)n Simple_repeat Simple_repeat 1 24 0 375 278 144 6 chr2 55691703 55691876 -197564707 - MIR SINE MIR -13 249 53 241 265 221 37 chr2 55692308 55692444 -197564139 - MIR3 SINE MIR -10 198 38 197 308 0 0 chr2 55692492 55692544 -197564039 - L2 LINE L2 -832 2482 2431 1861 262 84 20 chr2 55692624 55693174 -197563409 + MLT1E LTR MaLR 1 585 -8 2292 104 0 0 chr2 55693569 55693876 -197562707 + AluY SINE Alu 1 307 -4 17629 68 10 1 chr2 55694339 55696614 -197559969 + L1P LINE L1 11 2306 -3840 7291 36 9 0 chr2 55696614 55698125 -197558458 + L1PA4 LINE L1 4628 6155 0 818 102 15 51 chr2 55698129 55698266 -197558317 + THE1B LTR MaLR 171 302 -62 4876 152 81 14 chr2 55698450 55699415 -197557168 - L1MA9 LINE L1 0 6312 5283 1910 166 45 21 chr2 55699604 55699983 -197556600 + MLT1B LTR MaLR 2 389 -1 935 176 215 27 chr2 55700814 55701040 -197555543 - MLT2C2 LTR ERVL -2 462 130 4335 163 44 12 chr2 55701055 55701873 -197554710 - L1PA15 LINE L1 0 6165 5322 952 181 6 44 chr2 55702173 55702355 -197554228 - MLT2C1 LTR ERVL -94 303 129 15045 233 36 40 chr2 55702369 55707160 -197549423 - L1PA15 LINE L1 0 7603 2794 467 110 41 0 chr2 55707160 55707233 -197549350 - MADE1 DNA Mariner -2 78 3 15045 233 36 40 chr2 55707233 55708664 -197547919 - L1PA15 LINE L1 -4809 2794 907 4188 76 28 0 chr2 55708664 55709228 -197547355 - LTR19B LTR ERV1 0 580 1 15045 233 36 40 chr2 55709228 55710112 -197546471 - L1PA15 LINE L1 -6696 907 21 702 173 39 12 chr2 55710112 55710270 -197546313 - MLT2C2 LTR ERVL -325 139 1 2084 94 3 58 chr2 55710970 55711279 -197545304 + AluSp SINE Alu 1 292 -21 1466 219 72 19 chr2 55711525 55711958 -197544625 + MLT1C LTR MaLR 5 460 -7 188 238 16 0 chr2 55712160 55712223 -197544360 + (TTG)n Simple_repeat Simple_repeat 2 65 0 27 22 0 22 chr2 55712553 55712579 -197544004 + AT_rich Low_complexity Low_complexity 1 27 -17 1717 187 3 3 chr2 55712579 55712868 -197543715 + AluJo SINE Alu 1 289 -23 27 22 0 22 chr2 55712868 55712886 -197543697 + AT_rich Low_complexity Low_complexity 27 44 0 318 255 9 53 chr2 55713724 55713840 -197542743 + MLT1I LTR MaLR 77 220 -235 266 271 51 25 chr2 55714826 55714944 -197541639 + LTR67 LTR ERVL 427 547 -10 1018 314 35 25 chr2 55716126 55716521 -197540062 - L2 LINE L2 0 3313 2915 2204 143 25 3 chr2 55716715 55717071 -197539512 - THE1B LTR MaLR 0 364 1 2499 148 57 0 chr2 55717121 55717526 -197539057 + MSTA LTR MaLR 1 428 0 290 319 162 11 chr2 55717528 55717713 -197538870 + L2 LINE L2 2293 2505 -809 201 390 37 0 chr2 55718439 55718521 -197538062 + MIR SINE MIR 1 85 -177 287 271 14 0 chr2 55718839 55718909 -197537674 - MIR SINE MIR -63 145 75 210 208 38 0 chr2 55718903 55718956 -197537627 - MIR SINE MIR -104 158 104 * 207 313 91 30 chr2 55721026 55721125 -197535458 - L2 LINE L2 -21 3251 3147 1838 180 6 3 chr2 55722332 55722643 -197533940 + AluJo SINE Alu 1 312 0 188 232 18 54 chr2 55723228 55723284 -197533299 - MIR SINE MIR -5 257 204 270 267 168 25 chr2 55724526 55724687 -197531896 - L2 LINE L2 -4 3309 3126 743 284 29 22 chr2 55724955 55725268 -197531315 - LTR16A LTR ERVL -84 366 52 251 288 0 12 chr2 55725638 55725718 -197530865 - MARNA DNA Mariner -26 560 482 433 289 142 16 chr2 55725845 55726035 -197530548 + MIR SINE MIR 49 262 0 1068 159 49 0 chr2 55726122 55726348 -197530235 - L1MC3 LINE L1 0 7785 7549 23 54 0 0 chr2 55726853 55726890 -197529693 + AT_rich Low_complexity Low_complexity 1 37 0 1491 136 25 2 chr2 55727740 55728020 -197528563 + MER1B DNA MER1_type 1 329 0 2566 145 44 8 chr2 55728438 55728934 -197527649 - L1MB1 LINE L1 -284 5884 5371 2801 159 32 31 chr2 55728934 55729592 -197526991 + MER39B LTR ERV1 1 707 0 375 163 0 12 chr2 55729596 55729682 -197526901 - L1MB1 LINE L1 -813 5370 5286 * 1248 167 46 69 chr2 55729674 55729746 -197526837 + L1MB1 LINE L1 5870 5942 -226 2032 118 28 0 chr2 55729746 55730034 -197526549 + AluSx SINE Alu 1 296 -16 1248 167 46 69 chr2 55730034 55730266 -197526317 + L1MB1 LINE L1 5942 6167 -1 246 319 66 0 chr2 55731487 55731578 -197525005 + MIR SINE MIR 94 190 -72 194 322 122 0 chr2 55731999 55732089 -197524494 + MIR SINE MIR 127 227 -35 206 178 0 22 chr2 55734339 55734384 -197522199 + T-rich Low_complexity Low_complexity 2 45 0 364 234 140 0 chr2 55734799 55734906 -197521677 + MIR SINE MIR 92 213 -49 38 0 0 0 chr2 55734915 55734953 -197521630 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr2 55735676 55735697 -197520886 + AT_rich Low_complexity Low_complexity 1 21 0 693 216 81 37 chr2 55736602 55736666 -197519917 - L1ME1 LINE L1 -4 6162 6102 306 0 0 0 chr2 55736666 55736700 -197519883 + (TA)n Simple_repeat Simple_repeat 1 34 0 693 216 81 37 chr2 55736700 55736908 -197519675 - L1ME1 LINE L1 -64 6102 5878 212 390 9 0 chr2 55738037 55738142 -197518441 + MIR3 SINE MIR 87 192 -16 515 197 284 0 chr2 55738827 55738954 -197517629 - MER5A DNA MER1_type 0 189 27 568 242 6 31 chr2 55739030 55739191 -197517392 - MIR SINE MIR -1 261 105 255 324 46 19 chr2 55739331 55739439 -197517144 + L3 LINE CR1 885 995 -582 213 39 0 0 chr2 55739591 55739617 -197516966 + (TTTTTA)n Simple_repeat Simple_repeat 4 29 0 239 274 0 0 chr2 55739680 55739742 -197516841 - MLT1J1 LTR MaLR -53 393 332 2320 163 58 7 chr2 55739801 55740236 -197516347 - LTR32 LTR ERVL 0 471 15 274 283 42 25 chr2 55740238 55740358 -197516225 - HERVL32 LTR ERVL 0 3418 3297 2251 102 19 40 chr2 55740543 55740915 -197515668 - THE1B LTR MaLR 0 364 1 2486 133 19 19 chr2 55741779 55742201 -197514382 - LTR32 LTR ERVL -35 436 15 675 257 83 20 chr2 55742188 55742441 -197514142 - MLT1J2 LTR MaLR -181 269 1 * 898 311 124 39 chr2 55742451 55743088 -197513495 + L2 LINE L2 489 1179 -2135 755 263 32 5 chr2 55743167 55743384 -197513199 + MER58A DNA MER1_type 1 223 -1 513 121 0 50 chr2 55743563 55743660 -197512923 + MLT1A1 LTR MaLR 2 93 -272 1324 174 148 44 chr2 55743660 55743713 -197512870 + MSTC LTR MaLR 1 47 -381 1899 198 70 32 chr2 55743713 55744153 -197512430 + MSTB2 LTR MaLR 1 457 0 1324 174 148 44 chr2 55744153 55744485 -197512098 + MSTC LTR MaLR 47 426 -2 1359 175 14 36 chr2 55744490 55744564 -197512019 + MLT1A1 LTR MaLR 92 166 -199 1878 140 79 25 chr2 55744564 55744920 -197511663 - THE1C LTR MaLR 0 375 1 1359 175 14 36 chr2 55744920 55745125 -197511458 + MLT1A1 LTR MaLR 166 365 0 247 311 117 27 chr2 55745229 55745385 -197511198 - MIR3 SINE MIR -79 129 3 1728 190 18 3 chr2 55746445 55746771 -197509812 + MLT1A1 LTR MaLR 23 353 -12 257 273 60 80 chr2 55746876 55747026 -197509557 + L2 LINE L2 3122 3268 -4 204 125 0 0 chr2 55748585 55748617 -197507966 + (GAA)n Simple_repeat Simple_repeat 2 33 0 961 177 41 45 chr2 55749475 55749695 -197506888 - MER20 DNA MER1_type 0 219 1 1385 173 85 23 chr2 55749744 55750051 -197506532 - MER89 LTR ERV1 -2 557 232 1738 180 47 110 chr2 55750100 55750638 -197505945 - MLT1D LTR MaLR 0 505 2 791 217 51 0 chr2 55750651 55750808 -197505775 + MER5A DNA MER1_type 11 175 -14 804 78 9 0 chr2 55751003 55751118 -197505465 + MLT2B1 LTR ERVL 1 116 -404 313 100 0 0 chr2 55751145 55751195 -197505388 + MLT2B1 LTR ERVL 460 509 -11 1601 240 100 6 chr2 55751344 55751759 -197504824 + MLT2B1 LTR ERVL 1 467 -53 195 42 0 0 chr2 55751759 55751783 -197504800 + (TAGG)n Simple_repeat Simple_repeat 1 24 0 1601 240 100 6 chr2 55751783 55751838 -197504745 + MLT2B1 LTR ERVL 467 515 -5 245 234 11 32 chr2 55751940 55752034 -197504549 - MER112 DNA MER1_type -104 156 65 2170 135 0 0 chr2 55752075 55752386 -197504197 + AluSq SINE Alu 1 311 -2 324 100 0 43 chr2 55752390 55752460 -197504123 + (GAA)n Simple_repeat Simple_repeat 3 69 0 233 359 26 52 chr2 55752603 55752795 -197503788 + L2 LINE L2 3127 3313 0 1017 217 33 84 chr2 55753576 55753967 -197502616 - MLT1A2 LTR MaLR 0 374 4 371 259 69 30 chr2 55754238 55754369 -197502214 - L2 LINE L2 0 3272 3137 686 246 6 0 chr2 55754401 55754576 -197502007 - MER115 DNA AcHobo -9 684 509 561 217 47 0 chr2 55754607 55754736 -197501847 - MER115 DNA AcHobo -246 447 313 277 284 0 0 chr2 55754953 55755041 -197501542 + G-rich Low_complexity Low_complexity 1 88 0 686 246 6 0 chr2 55755148 55755323 -197501260 - MER115 DNA AcHobo -9 684 509 561 217 47 0 chr2 55755354 55755483 -197501100 - MER115 DNA AcHobo -246 447 313 530 286 87 0 chr2 55755627 55755788 -197500795 - MER5A DNA MER1_type 0 189 15 190 306 0 0 chr2 55755935 55755984 -197500599 - L2 LINE L2 -13 3259 3211 197 285 208 15 chr2 55756566 55756696 -197499887 - MIR3 SINE MIR -39 169 15 1664 163 18 31 chr2 55758162 55758275 -197498308 + MER67D LTR ERV1 3 116 -398 1812 164 10 13 chr2 55758275 55758573 -197498010 + AluJo SINE Alu 1 297 -15 1664 163 18 31 chr2 55758573 55758785 -197497798 + MER67D LTR ERV1 116 324 -190 314 172 155 75 chr2 55759919 55760093 -197496490 - L1ME4a LINE L1 -67 6054 5867 1469 162 42 71 chr2 55760111 55760420 -197496163 - AluJo SINE Alu -12 300 1 225 194 0 97 chr2 55761976 55762048 -197494535 + L1MEc LINE L1 1313 1377 -5019 450 284 39 0 chr2 55762088 55762190 -197494393 + L2 LINE L2 3148 3253 -19 192 152 0 0 chr2 55762203 55762236 -197494347 + GA-rich Low_complexity Low_complexity 4 36 0 489 237 40 0 chr2 55762328 55762480 -197494103 - HAL1b LINE L1 -7 1341 1184 2099 114 0 17 chr2 55762909 55763206 -197493377 + AluSg1 SINE Alu 1 292 -17 581 273 93 44 chr2 55764060 55764265 -197492318 + MER58C DNA MER1_type 1 215 0 240 35 0 0 chr2 55764286 55764315 -197492268 + (CA)n Simple_repeat Simple_repeat 2 30 0 608 271 73 20 chr2 55764358 55764605 -197491978 + MIR SINE MIR 3 262 0 935 237 78 0 chr2 55765743 55765975 -197490608 + MIR SINE MIR 8 257 -5 1517 147 54 19 chr2 55766635 55766948 -197489635 + MER33 DNA MER1_type 1 324 0 21 71 0 0 chr2 55767138 55767180 -197489403 + AT_rich Low_complexity Low_complexity 1 42 0 1312 69 0 17 chr2 55767532 55767705 -197488878 - L1PA4 LINE L1 0 6155 5986 3888 20 0 0 chr2 55767705 55768144 -197488439 + L1PA4 LINE L1 5459 5897 -258 2343 88 10 0 chr2 55768514 55768819 -197487764 + AluY SINE Alu 2 309 -2 4252 137 6 20 chr2 55769423 55770067 -197486516 + MER41B LTR ERV1 1 635 0 361 244 163 15 chr2 55770103 55770238 -197486345 - MER5A DNA MER1_type 0 189 35 2763 185 27 55 chr2 55770365 55770926 -197485657 + MLT2B3 LTR ERVL 1 545 -9 203 189 0 0 chr2 55771554 55771591 -197484992 + A-rich Low_complexity Low_complexity 1 37 0 307 171 37 33 chr2 55771792 55771866 -197484717 + MLT1B LTR MaLR 1 83 -282 4894 128 157 104 chr2 55771999 55773205 -197483378 + pTR5 LTR ERV1 1170 2438 0 1641 195 15 21 chr2 55773206 55773540 -197483043 + MLT1B LTR MaLR 55 386 -4 26 0 0 0 chr2 55774326 55774352 -197482231 + AT_rich Low_complexity Low_complexity 1 26 0 616 234 23 8 chr2 55774521 55774649 -197481934 - MER5A DNA MER1_type 0 189 60 628 216 56 8 chr2 55774650 55774775 -197481808 + FLAM_C SINE Alu 3 133 -10 1755 163 7 20 chr2 55774786 55775087 -197481496 - AluJo SINE Alu -15 297 1 2419 79 0 0 chr2 55775098 55775401 -197481182 - AluY SINE Alu -8 303 1 260 111 33 233 chr2 55775402 55775492 -197481091 - MER5A DNA MER1_type -114 75 4 924 283 151 49 chr2 55775610 55776286 -197480297 + HAL1 LINE L1 138 882 -1625 723 218 87 24 chr2 55776290 55776496 -197480087 - LTR18B LTR ERVL -13 601 383 801 254 65 20 chr2 55776561 55776762 -197479821 - LTR18A LTR ERVL -147 210 1 1140 163 0 96 chr2 55777053 55777292 -197479291 + MER20 DNA MER1_type 1 216 -3 4233 103 47 18 chr2 55777390 55778069 -197478514 + L1PA16 LINE L1 5300 5998 -168 542 183 96 19 chr2 55778246 55778398 -197478185 - MLT-int LTR MaLR -946 425 279 636 274 41 5 chr2 55778589 55778786 -197477797 + MIR SINE MIR 50 253 -9 885 206 21 21 chr2 55779073 55779262 -197477321 - MER5A DNA MER1_type 0 189 1 274 239 15 0 chr2 55780039 55780106 -197476477 + (TG)n Simple_repeat Simple_repeat 2 69 0 797 334 176 15 chr2 55780274 55781506 -197475077 + L2 LINE L2 1828 3270 -2 425 306 92 49 chr2 55781865 55782309 -197474274 + L2 LINE L2 2766 3226 -46 591 245 48 0 chr2 55782744 55782891 -197473692 + MER103 DNA DNA 13 166 0 184 43 0 0 chr2 55784025 55784048 -197472535 - MIR SINE MIR -8 254 232 206 265 0 0 chr2 55784837 55784886 -197471697 - MIR SINE MIR -106 156 108 1602 157 18 102 chr2 55786417 55786609 -197469974 - MLT1B LTR MaLR -12 378 232 2193 121 0 0 chr2 55786609 55786906 -197469677 - AluSg SINE Alu -13 297 1 1602 157 18 102 chr2 55786906 55787095 -197469488 - MLT1B LTR MaLR -158 232 29 2975 30 3 0 chr2 55787154 55787487 -197469096 - L1PA4 LINE L1 0 6155 5822 353 305 64 14 chr2 55787548 55787689 -197468894 + MIR3 SINE MIR 54 201 -7 222 336 26 18 chr2 55788378 55788491 -197468092 + MIR SINE MIR 85 198 -64 300 198 81 58 chr2 55789245 55789331 -197467252 - MER5B DNA MER1_type -74 104 17 182 62 31 0 chr2 55789333 55789365 -197467218 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 235 287 148 0 chr2 55789761 55789883 -197466700 + L2 LINE L2 2911 3050 -222 193 372 32 0 chr2 55789923 55790017 -197466566 + L2 LINE L2 3205 3301 -12 2596 160 14 9 chr2 55790490 55790983 -197465600 - LTR32 LTR ERVL -1 470 15 233 196 0 0 chr2 55791023 55791069 -197465514 - L2 LINE L2 0 3313 3268 556 234 19 25 chr2 55791435 55791593 -197464990 + MER58B DNA MER1_type 176 332 -9 344 281 114 9 chr2 55791832 55791946 -197464637 - MIR SINE MIR -79 183 58 2131 115 14 0 chr2 55792886 55793173 -197463410 + AluSx SINE Alu 1 291 -21 1408 143 90 50 chr2 55793639 55793961 -197462622 - THE1C LTR MaLR -40 335 1 2414 55 0 19 chr2 55794096 55794404 -197462179 - AluY SINE Alu -9 302 1 383 224 8 90 chr2 55795246 55795380 -197461203 - MIR SINE MIR -119 143 21 310 152 11 163 chr2 55795861 55795899 -197460684 - MER96 DNA MER1_type? 0 175 157 2231 107 0 7 chr2 55795899 55796199 -197460384 + AluSq SINE Alu 1 298 -15 310 152 11 163 chr2 55796199 55796252 -197460331 - MER96 DNA MER1_type? -18 157 98 312 298 114 9 chr2 55797113 55797227 -197459356 + MIR SINE MIR 58 183 -79 291 256 147 23 chr2 55797723 55797852 -197458731 + MLT1L LTR MaLR 471 615 0 422 341 123 38 chr2 55798268 55798602 -197457981 + L2 LINE L2 2215 2519 -795 1775 194 0 3 chr2 55798602 55798911 -197457672 - AluJb SINE Alu -4 308 1 422 341 123 38 chr2 55798911 55799186 -197457397 + L2 LINE L2 2519 2876 -438 1990 115 29 4 chr2 55799406 55799685 -197456898 + AluJb SINE Alu 10 295 -17 210 240 142 74 chr2 55800303 55800504 -197456079 - MIR3 SINE MIR -44 218 6 195 235 0 78 chr2 55801534 55801585 -197454998 - L2 LINE L2 -2 3270 3224 321 284 14 54 chr2 55803295 55803321 -197453262 - MIR SINE MIR -10 252 226 2296 96 0 10 chr2 55803321 55803624 -197452959 + AluSq SINE Alu 1 300 -13 321 284 14 54 chr2 55803624 55803745 -197452838 - MIR SINE MIR -36 226 111 455 277 40 5 chr2 55803812 55804014 -197452569 + L1ME4a LINE L1 5697 5905 -216 262 224 15 30 chr2 55804015 55804082 -197452501 + GA-rich Low_complexity Low_complexity 4 69 0 2184 108 3 0 chr2 55804091 55804387 -197452196 + AluSg SINE Alu 1 297 -13 304 265 0 0 chr2 55804422 55804505 -197452078 + L1MA10 LINE L1 6250 6332 -2 260 246 109 0 chr2 55804501 55804611 -197451972 + L1ME4a LINE L1 5991 6112 -9 * 327 244 139 0 chr2 55804677 55804763 -197451820 - MER5B DNA MER1_type -78 100 3 2369 88 0 0 chr2 55806242 55806538 -197450045 + AluSq SINE Alu 1 296 -17 523 268 71 71 chr2 55807340 55807594 -197448989 - MLT1J LTR MaLR -26 485 232 487 269 22 15 chr2 55807635 55807769 -197448814 - MLT1J LTR MaLR -376 135 1 253 284 0 14 chr2 55808364 55808438 -197448145 - MIR SINE MIR 0 262 190 271 122 0 0 chr2 55808537 55808578 -197448005 + MLT1A1 LTR MaLR 252 292 -73 * 774 208 23 72 chr2 55808574 55808835 -197447748 - MLT1A2 LTR MaLR -130 260 12 300 269 0 13 chr2 55808837 55808915 -197447668 - MIR SINE MIR -94 168 92 705 268 91 49 chr2 55809232 55809475 -197447108 - MIR SINE MIR 0 262 10 4185 246 69 49 chr2 55811293 55812750 -197443833 + HAL1 LINE L1 2 1428 -1079 1842 157 4 7 chr2 55812750 55813031 -197443552 + AluSx SINE Alu 1 280 -32 288 0 0 0 chr2 55813031 55813063 -197443520 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 4185 246 69 49 chr2 55813063 55813359 -197443224 + HAL1 LINE L1 1428 1717 -790 2380 92 0 3 chr2 55813359 55813665 -197442918 + AluY SINE Alu 1 305 -6 4185 246 69 49 chr2 55813665 55814341 -197442242 + HAL1 LINE L1 1717 2501 -6 388 257 140 45 chr2 55814411 55814633 -197441950 - MIR SINE MIR 0 262 20 299 379 29 73 chr2 55814668 55814982 -197441601 + L2 LINE L2 2918 3217 -55 207 0 0 0 chr2 55815235 55815258 -197441325 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 2231 126 26 19 chr2 55815673 55816095 -197440488 + Tigger2 DNA MER2_type 1 425 -2293 2237 105 0 3 chr2 55816095 55816390 -197440193 - AluSg SINE Alu -16 294 1 6493 117 43 1 chr2 55816413 55817441 -197439142 + Tigger2 DNA MER2_type 618 1688 -1030 2043 69 0 0 chr2 55817463 55817724 -197438859 - L1PA7 LINE L1 -4 6150 5890 2021 101 31 14 chr2 55818058 55818346 -197438237 + AluSg SINE Alu 17 309 -1 1043 134 29 12 chr2 55818483 55818655 -197437928 - AluSx SINE Alu -137 175 1 1900 144 7 10 chr2 55818725 55819024 -197437559 - AluSx SINE Alu -4 308 11 2236 97 0 26 chr2 55819063 55819373 -197437210 + AluSg SINE Alu 1 302 -8 1650 124 124 4 chr2 55819518 55819785 -197436798 + AluSx SINE Alu 2 300 -12 273 29 0 0 chr2 55819911 55819945 -197436638 + (TG)n Simple_repeat Simple_repeat 2 35 0 559 170 30 0 chr2 55820687 55820787 -197435796 - L1MC1 LINE L1 0 6333 6231 342 209 213 22 chr2 55821005 55821230 -197435353 - L1MC5 LINE L1 -34 7927 7660 1331 200 3 57 chr2 55821676 55821991 -197434592 - AluJo SINE Alu -6 306 9 2139 108 3 3 chr2 55822006 55822301 -197434282 - AluSc SINE Alu -14 295 1 4602 42 5 0 chr2 55822757 55823335 -197433248 + LTR10C LTR ERV1 11 591 0 1665 151 17 41 chr2 55823353 55823645 -197432938 - AluJb SINE Alu -26 286 2 2086 126 3 0 chr2 55823906 55824207 -197432376 - AluSx SINE Alu -10 302 1 2198 114 3 0 chr2 55824616 55824915 -197431668 - AluSx SINE Alu -12 300 1 1151 172 21 148 chr2 55825660 55825998 -197430585 - AluYb8 SINE Alu -12 296 2 21 0 0 0 chr2 55826197 55826218 -197430365 + AT_rich Low_complexity Low_complexity 1 21 0 1218 129 0 0 chr2 55826645 55826816 -197429767 - AluSg/x SINE Alu -8 304 134 1867 97 8 0 chr2 55826816 55827064 -197429519 - AluSx SINE Alu -7 305 56 251 178 208 50 chr2 55827214 55827315 -197429268 - L1MC5 LINE L1 -680 7281 7165 2608 124 98 42 chr2 55827358 55827858 -197428725 + MER1A DNA MER1_type 2 529 0 385 247 60 13 chr2 55827862 55828012 -197428571 - L1MC5 LINE L1 -845 7116 6960 21 71 0 0 chr2 55828237 55828279 -197428304 + AT_rich Low_complexity Low_complexity 1 42 0 1071 141 0 0 chr2 55828282 55828438 -197428145 + AluSg/x SINE Alu 133 288 -24 2093 127 10 0 chr2 55828482 55828774 -197427809 - AluSq SINE Alu -18 295 1 755 206 8 0 chr2 55828951 55829082 -197427501 + FAM SINE Alu 1 132 -53 2267 116 0 0 chr2 55829094 55829396 -197427187 - AluSg SINE Alu -8 302 1 1630 170 21 3 chr2 55829824 55830113 -197426470 + AluJo SINE Alu 13 306 -6 225 0 0 0 chr2 55830114 55830139 -197426444 + (CAAAC)n Simple_repeat Simple_repeat 5 29 0 269 26 26 0 chr2 55831345 55831383 -197425200 + (GGA)n Simple_repeat Simple_repeat 3 41 0 2068 116 13 7 chr2 55832641 55832944 -197423639 - AluSx SINE Alu -7 305 1 679 257 284 12 chr2 55833147 55833625 -197422958 - L2 LINE L2 -34 3279 2651 1995 200 24 24 chr2 55833625 55834090 -197422493 + MLT1C LTR MaLR 1 465 -2 999 128 29 12 chr2 55834099 55834271 -197422312 - MER4B LTR ERV1 -4 606 432 700 292 129 28 chr2 55834513 55835078 -197421505 - HAL1 LINE L1 -635 1872 1251 1823 135 53 4 chr2 55835433 55835714 -197420869 + AluSq SINE Alu 1 295 -18 1036 171 0 17 chr2 55836301 55836551 -197420032 - AluJb SINE Alu 0 310 1 2125 111 3 7 chr2 55836712 55837010 -197419573 + AluSp SINE Alu 2 298 -15 1940 142 7 17 chr2 55837079 55837381 -197419202 - AluJb SINE Alu -13 299 1 260 200 0 0 chr2 55837435 55837480 -197419103 + MIR SINE MIR 206 250 -12 409 247 0 0 chr2 55837525 55837610 -197418973 + MIR SINE MIR 178 262 0 1637 209 7 0 chr2 55837705 55838006 -197418577 - AluJo SINE Alu -5 307 5 248 272 95 41 chr2 55838026 55838173 -197418410 + L2 LINE L2 3134 3288 -25 462 249 32 75 chr2 55838592 55838771 -197417812 - MER93b LTR ERV1 0 373 209 2246 125 0 0 chr2 55838771 55839066 -197417517 + AluJb SINE Alu 1 295 -17 462 249 32 75 chr2 55839066 55839167 -197417416 - MER93b LTR ERV1 -164 209 105 5016 143 43 9 chr2 55839169 55840218 -197416365 + L1MA7 LINE L1 5201 6291 0 502 174 61 0 chr2 55840222 55840320 -197416263 - MER93b LTR ERV1 -258 115 12 2112 107 7 16 chr2 55840335 55840643 -197415940 - AluSx SINE Alu -7 305 1 1569 175 10 42 chr2 55841672 55841981 -197414602 - AluJo SINE Alu -13 299 1 294 143 0 0 chr2 55842666 55842722 -197413861 + L1MA4A LINE L1 6225 6280 -23 2304 94 0 3 chr2 55842732 55843031 -197413552 + AluSx SINE Alu 1 298 -14 327 167 42 0 chr2 55843043 55843115 -197413468 + MER72 LTR ERV1 585 659 -63 21 36 0 0 chr2 55843117 55843145 -197413438 + AT_rich Low_complexity Low_complexity 1 28 0 1612 164 24 3 chr2 55844457 55844749 -197411834 - AluSx SINE Alu -11 301 4 2008 123 10 3 chr2 55844776 55845077 -197411506 + AluSg SINE Alu 1 303 -7 26 30 0 0 chr2 55845193 55845226 -197411357 + AT_rich Low_complexity Low_complexity 1 33 0 1394 50 0 33 chr2 55845611 55845793 -197410790 + L1PA12 LINE L1 5978 6153 -15 2991 51 34 0 chr2 55845954 55846544 -197410039 - L1P2 LINE L1 -614 5540 4939 5528 148 20 13 chr2 55846544 55847559 -197409024 + Tigger2 DNA MER2_type 1697 2718 0 261 0 0 0 chr2 55850743 55850772 -197405811 + (A)n Simple_repeat Simple_repeat 1 29 0 330 310 41 48 chr2 55850892 55851037 -197405546 + MIR3 SINE MIR 32 175 -33 851 300 153 8 chr2 55851681 55852034 -197404549 + L2 LINE L2 2376 2779 -535 273 323 153 0 chr2 55852104 55852228 -197404355 + L2 LINE L2 2918 3060 -253 228 247 14 41 chr2 55852321 55852394 -197404189 + L2 LINE L2 3243 3313 0 280 227 0 67 chr2 55852773 55852848 -197403735 + MER94 DNA DNA 17 86 -48 1114 299 14 14 chr2 55853250 55853605 -197402978 - LTR16A LTR ERVL 0 450 96 194 326 22 33 chr2 55853813 55853905 -197402678 + L2 LINE L2 3204 3294 -19 23 0 0 0 chr2 55854549 55854572 -197402011 + AT_rich Low_complexity Low_complexity 1 23 0 1072 122 15 26 chr2 55854630 55855212 -197401371 - L1PB2 LINE L1 0 6151 5460 416 286 227 5 chr2 55855508 55855693 -197400890 + MIR SINE MIR 37 262 0 1296 172 11 48 chr2 55855836 55856109 -197400474 + Tigger7 DNA MER2_type 1 263 -287 436 218 11 0 chr2 55856130 55856217 -197400366 + Tigger7 DNA MER2_type 2404 2491 0 2288 117 0 0 chr2 55856666 55856975 -197399608 - AluSx SINE Alu -3 309 1 1049 260 42 39 chr2 55859893 55860277 -197396306 + L2 LINE L2 2886 3270 -43 512 141 0 12 chr2 55860516 55860601 -197395982 + MLT1A1 LTR MaLR 1 84 -281 * 774 145 14 0 chr2 55860597 55860735 -197395848 + MLT1A1 LTR MaLR 226 365 0 580 176 172 23 chr2 55860736 55860957 -197395626 - Charlie5 DNA MER1_type 0 2624 2371 238 111 0 0 chr2 55860933 55860969 -197395614 - Charlie5 DNA MER1_type -2539 73 38 * 788 190 7 7 chr2 55860977 55861119 -197395464 + AluJb SINE Alu 137 278 -34 261 0 0 0 chr2 55861119 55861148 -197395435 + (TC)n Simple_repeat Simple_repeat 2 30 0 310 219 0 0 chr2 55861148 55861212 -197395371 + L1MC4 LINE L1 6640 6703 -1339 185 319 0 43 chr2 55861869 55861938 -197394645 + L2 LINE L2 2982 3047 -225 505 211 105 0 chr2 55861954 55862125 -197394458 - MER53 DNA DNA 0 189 1 417 39 0 0 chr2 55862609 55862660 -197393923 + (CA)n Simple_repeat Simple_repeat 1 51 0 741 127 127 0 chr2 55862687 55862821 -197393762 - MLT1B LTR MaLR -49 341 191 1134 244 38 12 chr2 55862944 55863284 -197393299 + L1ME3A LINE L1 632 980 -5304 203 86 0 29 chr2 55863442 55863477 -197393106 + (CTTTG)n Simple_repeat Simple_repeat 2 35 0 375 311 44 15 chr2 55863660 55863795 -197392788 + MIR SINE MIR 41 179 -83 368 259 39 112 chr2 55863797 55864002 -197392581 - L2 LINE L2 -5 3308 3119 1860 264 89 19 chr2 55864021 55864979 -197391604 + L1ME3A LINE L1 1001 2152 -4411 1780 193 3 0 chr2 55864980 55865285 -197391298 - AluJo SINE Alu -1 311 6 4438 164 8 1 chr2 55865310 55866046 -197390537 + MER109 Unknown Unknown 275 1015 -1417 7002 173 134 48 chr2 55866333 55867931 -197388652 + MER52A LTR ERV1 21 1755 0 2526 201 52 12 chr2 55867933 55868430 -197388153 + MER109 Unknown Unknown 1911 2427 -5 3975 241 76 96 chr2 55868439 55868804 -197387779 + L1ME3A LINE L1 2145 2516 -3866 1439 156 17 0 chr2 55868804 55869035 -197387548 - MER46A DNA MER2_type -1 235 1 3975 241 76 96 chr2 55869035 55869964 -197386619 + L1ME3A LINE L1 2516 3462 -2920 1529 225 109 68 chr2 55869964 55870449 -197386134 + MLT1D LTR MaLR 1 505 0 3975 241 76 96 chr2 55870449 55870850 -197385733 + L1ME3A LINE L1 3462 3869 -2513 2333 171 54 10 chr2 55870850 55871260 -197385323 - MSTA LTR MaLR 0 428 1 3975 241 76 96 chr2 55871260 55872085 -197384498 + L1ME3A LINE L1 3869 4575 -1807 2275 218 74 21 chr2 55872101 55872616 -197383967 - MER44D DNA MER2_type -8 597 1 583 263 48 59 chr2 55872620 55872992 -197383591 + L1ME3A LINE L1 4574 4941 -1441 2019 262 102 40 chr2 55873004 55873053 -197383530 + L1ME3A LINE L1 5121 5166 -1240 2107 140 0 0 chr2 55873053 55873353 -197383230 - AluJb SINE Alu -12 300 1 2019 262 102 40 chr2 55873353 55874458 -197382125 + L1ME3A LINE L1 5166 6338 -68 384 123 0 35 chr2 55874484 55874541 -197382042 - MER2 DNA MER2_type 0 345 291 234 373 25 25 chr2 55874759 55874920 -197381663 - L2 LINE L2 -1044 2270 2110 2407 49 0 3 chr2 55875585 55875903 -197380680 - AluY SINE Alu 0 317 1 830 223 52 82 chr2 55876813 55877082 -197379501 + MIR SINE MIR 2 262 0 659 311 24 5 chr2 55877246 55877452 -197379131 + MIR SINE MIR 53 262 0 183 297 110 0 chr2 55877861 55877952 -197378631 + MIR SINE MIR 119 219 -43 1674 141 41 7 chr2 55879083 55879352 -197377231 + AluSx SINE Alu 2 279 -33 1141 260 143 14 chr2 55880266 55880701 -197375882 + L1ME3 LINE L1 5656 6146 -16 2052 201 81 34 chr2 55882667 55883045 -197373538 - L1ME2 LINE L1 0 6164 5750 670 156 0 18 chr2 55883045 55883154 -197373429 - U6 snRNA snRNA 0 107 1 2052 201 81 34 chr2 55883154 55883332 -197373251 - L1ME2 LINE L1 -414 5750 5582 1836 169 0 7 chr2 55883333 55883629 -197372954 + AluJb SINE Alu 1 294 -18 2314 82 20 0 chr2 55883708 55884001 -197372582 - AluSg SINE Alu -11 299 1 2285 108 0 13 chr2 55884169 55884484 -197372099 + AluSq SINE Alu 1 311 -2 1350 204 73 36 chr2 55886552 55886909 -197369674 - MLT1C LTR MaLR 0 467 98 1598 185 67 15 chr2 55886939 55887269 -197369314 + MLT1A1 LTR MaLR 19 365 0 298 193 53 0 chr2 55887272 55887329 -197369254 - MLT1C LTR MaLR -405 62 3 443 278 0 88 chr2 55887357 55887471 -197369112 + MER5B DNA MER1_type 1 93 -85 1431 117 84 9 chr2 55887471 55887685 -197368898 + MER30 DNA MER1_type 1 230 0 443 278 0 88 chr2 55887685 55887764 -197368819 + MER5B DNA MER1_type 93 177 -1 24 0 0 0 chr2 55888358 55888382 -197368201 + AT_rich Low_complexity Low_complexity 1 24 0 216 347 0 0 chr2 55889481 55889553 -197367030 - L2 LINE L2 0 3272 3201 644 227 112 84 chr2 55890056 55890177 -197366406 + Charlie8 DNA MER1_type 70 186 -2231 1630 76 0 14 chr2 55890177 55890433 -197366150 - AluY SINE Alu 0 311 89 644 227 112 84 chr2 55890433 55890633 -197365950 + Charlie8 DNA MER1_type 186 400 -2017 270 209 114 114 chr2 55891990 55892201 -197364382 - MLT1J LTR MaLR -53 458 248 647 226 19 31 chr2 55892432 55892591 -197363992 - L2 LINE L2 -5 3267 3111 1404 229 95 25 chr2 55892691 55893175 -197363408 + L1MD3 LINE L1 7478 7995 0 201 333 0 0 chr2 55893223 55893274 -197363309 - L2 LINE L2 -31 3282 3232 29 28 0 0 chr2 55894079 55894115 -197362468 + AT_rich Low_complexity Low_complexity 1 36 0 423 0 0 0 chr2 55894891 55894938 -197361645 + (TG)n Simple_repeat Simple_repeat 2 48 0 467 264 165 78 chr2 55895246 55895580 -197361003 + MLT1L LTR MaLR 4 366 -249 296 227 67 0 chr2 55896447 55896522 -197360061 + L2 LINE L2 3233 3312 -1 485 284 86 56 chr2 55896748 55896980 -197359603 + MIR SINE MIR 24 262 0 2176 118 7 0 chr2 55897095 55897391 -197359192 - AluY SINE Alu -13 298 1 2137 112 0 16 chr2 55897401 55897713 -197358870 - AluSx SINE Alu -5 307 1 24 0 0 0 chr2 55898061 55898085 -197358498 + AT_rich Low_complexity Low_complexity 1 24 0 1368 146 0 23 chr2 55898087 55898306 -197358277 - L1PA16 LINE L1 -2 6164 5951 353 206 74 103 chr2 55898386 55898561 -197358022 + L2 LINE L2 3128 3297 -16 385 257 150 7 chr2 55898803 55898943 -197357640 - MIR SINE MIR -15 247 88 1275 155 22 17 chr2 55898997 55899229 -197357354 - L1MA8 LINE L1 -2 6289 6057 453 307 46 58 chr2 55899316 55899661 -197356922 - MLT1J LTR MaLR -52 459 119 43424 33 24 2 chr2 55899707 55905718 -197350865 + L1PA3 LINE L1 7 6147 -8 291 281 153 92 chr2 55905823 55906118 -197350465 + L2 LINE L2 2959 3271 -1 1991 201 127 71 chr2 55907031 55907219 -197349364 + MLT1F1 LTR MaLR 1 177 -390 455 0 18 0 chr2 55907219 55907274 -197349309 + (TC)n Simple_repeat Simple_repeat 1 56 0 1991 201 127 71 chr2 55907274 55907622 -197348961 + MLT1F1 LTR MaLR 177 567 0 754 297 82 25 chr2 55907809 55908344 -197348239 - L1ME LINE L1 -301 5820 5255 909 299 116 21 chr2 55908844 55909319 -197347264 + MLT1L LTR MaLR 88 607 -8 1705 148 4 4 chr2 55910947 55911197 -197345386 + AluJo SINE Alu 1 250 -62 867 216 3 6 chr2 55911210 55911506 -197345077 + GA-rich Low_complexity Low_complexity 1 295 0 312 27 0 0 chr2 55911513 55911550 -197345033 + (GAAA)n Simple_repeat Simple_repeat 4 40 0 965 177 28 0 chr2 55911748 55911929 -197344654 - MER53 DNA DNA 0 189 4 473 188 201 34 chr2 55911992 55912141 -197344442 + MER5B DNA MER1_type 2 175 -3 27 29 0 0 chr2 55912241 55912275 -197344308 + AT_rich Low_complexity Low_complexity 1 34 0 1677 163 17 27 chr2 55912802 55913103 -197343480 - AluJb SINE Alu -14 298 1 2543 191 26 28 chr2 55914278 55914822 -197341761 + MER90 LTR ERV1 70 612 -2 2473 64 0 22 chr2 55915194 55915507 -197341076 - AluY SINE Alu -5 306 1 521 217 14 161 chr2 55915923 55916077 -197340506 + MER112 DNA MER1_type 2 177 -83 1731 180 34 10 chr2 55916077 55916198 -197340385 + AluJo SINE Alu 1 118 -194 207 0 0 0 chr2 55916198 55916221 -197340362 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1718 183 3 35 chr2 55916224 55916541 -197340042 + AluJb SINE Alu 1 307 -5 1731 180 34 10 chr2 55916541 55916710 -197339873 + AluJo SINE Alu 119 302 -10 521 217 14 161 chr2 55916710 55916841 -197339742 + MER112 DNA MER1_type 177 245 -15 21 0 0 0 chr2 55917957 55917978 -197338605 + AT_rich Low_complexity Low_complexity 1 21 0 885 285 26 13 chr2 55918171 55918430 -197338153 - MIR SINE MIR 0 262 3 2356 41 3 24 chr2 55918933 55919257 -197337326 + AluY SINE Alu 1 318 0 203 267 27 13 chr2 55921051 55921126 -197335457 - MIR SINE MIR -16 246 171 2109 123 0 19 chr2 55921228 55921545 -197335038 + AluSx SINE Alu 1 311 -1 198 207 35 0 chr2 55921545 55921603 -197334980 - MIR SINE MIR -129 133 74 234 313 87 26 chr2 55923189 55923304 -197333279 - MIR3 SINE MIR -24 184 63 6382 140 12 12 chr2 55925288 55925586 -197330997 - L1MA4A LINE L1 0 6303 6006 294 50 0 0 chr2 55925586 55925626 -197330957 + (CA)n Simple_repeat Simple_repeat 1 40 0 6382 140 12 12 chr2 55925626 55926464 -197330119 - L1MA4A LINE L1 -297 6006 5167 2239 103 0 0 chr2 55926464 55926754 -197329829 - AluSc SINE Alu -19 290 1 6382 140 12 12 chr2 55926754 55927050 -197329533 - L1MA4A LINE L1 -1136 5167 4872 266 238 48 0 chr2 55927176 55927239 -197329344 - MER57-int LTR ERV1 -7238 299 234 831 228 16 5 chr2 55927455 55927639 -197328944 - MER5A DNA MER1_type -3 186 1 2181 110 0 0 chr2 55928840 55929130 -197327453 + AluSg SINE Alu 1 290 -20 303 277 154 64 chr2 55929132 55929256 -197327327 + MIR SINE MIR 26 174 -88 953 171 80 6 chr2 55929256 55929432 -197327151 + MER5A DNA MER1_type 1 189 0 303 277 154 64 chr2 55929432 55929495 -197327088 + MIR SINE MIR 174 230 -32 189 0 0 0 chr2 55929628 55929649 -197326934 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2253 73 0 14 chr2 55929651 55929939 -197326644 - AluY SINE Alu -25 286 3 676 177 0 24 chr2 55930003 55930127 -197326456 - AluJb SINE Alu 0 312 192 * 736 207 0 8 chr2 55930125 55930246 -197326337 - AluJb SINE Alu -58 254 135 332 307 102 18 chr2 55930246 55930412 -197326171 - L1ME4a LINE L1 -217 5904 5725 22 35 0 0 chr2 55930906 55930935 -197325648 + AT_rich Low_complexity Low_complexity 1 29 0 334 290 156 35 chr2 55931407 55931952 -197324631 + L1M4 LINE L1 4233 4843 -1303 531 241 117 6 chr2 55932091 55932253 -197324330 + L2 LINE L2 2552 2731 -583 571 221 113 63 chr2 55932317 55932539 -197324044 - MIR SINE MIR 0 262 30 417 39 0 0 chr2 55933093 55933144 -197323439 + (TG)n Simple_repeat Simple_repeat 1 51 0 434 332 92 9 chr2 55933496 55933713 -197322870 - MIR SINE MIR -8 254 20 1240 293 50 25 chr2 55933974 55934572 -197322011 - L1ME3A LINE L1 -222 5948 5336 407 374 77 16 chr2 55934655 55935073 -197321510 - L2 LINE L2 -110 3162 2713 710 288 80 0 chr2 55935908 55936134 -197320449 - MIR SINE MIR -4 258 15 2007 211 8 6 chr2 55936649 55937013 -197319570 + MLT1A1 LTR MaLR 1 365 0 764 153 11 9 chr2 55938567 55938771 -197317812 - AluJb SINE Alu -9 303 30 207 0 0 0 chr2 55939037 55939060 -197317523 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 1824 172 7 0 chr2 55939061 55939352 -197317231 + AluJo SINE Alu 4 296 -16 365 255 49 10 chr2 55939495 55939597 -197316986 + MER96B DNA MER1_type? 1 106 -311 198 71 0 0 chr2 55939600 55939628 -197316955 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1140 182 0 29 chr2 55939646 55939855 -197316728 - AluJ SINE Alu -109 203 1 276 68 27 122 chr2 55939859 55939933 -197316650 - MER96B DNA MER1_type? -101 316 250 1980 88 109 4 chr2 55940111 55940385 -197316198 + AluSq SINE Alu 1 303 -10 288 348 116 13 chr2 55940625 55940858 -197315725 + MIR SINE MIR 2 258 -4 210 304 232 6 chr2 55941167 55941335 -197315248 - MIR SINE MIR 0 262 57 2379 112 0 0 chr2 55943362 55943674 -197312909 - AluSx SINE Alu 0 312 1 1283 171 9 5 chr2 55944213 55944430 -197312153 + MER58A DNA MER1_type 7 224 0 337 319 38 25 chr2 55945336 55945493 -197311090 + L2 LINE L2 2602 2760 -554 255 103 0 0 chr2 55945975 55946014 -197310569 + (TC)n Simple_repeat Simple_repeat 2 40 0 219 304 18 0 chr2 55946091 55946147 -197310436 - L2 LINE L2 0 3272 3216 435 84 39 77 chr2 55946791 55946946 -197309637 + (TA)n Simple_repeat Simple_repeat 1 149 0 187 336 177 9 chr2 55947385 55947611 -197308972 + L2 LINE L2 2710 2973 -341 2511 167 94 2 chr2 55948066 55948521 -197308062 + LOR1a LTR ERV1 1 497 0 434 309 113 5 chr2 55949647 55949841 -197306742 + L2 LINE L2 2440 2654 -660 1292 198 26 38 chr2 55949843 55950156 -197306427 - L1MA4 LINE L1 -2 6298 5990 638 317 56 22 chr2 55950156 55950478 -197306105 + L2 LINE L2 2645 2977 -337 2171 121 0 0 chr2 55950923 55951221 -197305362 + AluSx SINE Alu 3 300 -12 21 57 0 0 chr2 55951270 55951305 -197305278 + AT_rich Low_complexity Low_complexity 1 35 0 2120 117 0 0 chr2 55951705 55952019 -197304564 + AluSx SINE Alu 1 314 0 2160 176 3 3 chr2 55952358 55952711 -197303872 + MLT1A1 LTR MaLR 13 365 0 272 210 235 50 chr2 55954356 55954475 -197302108 - MIR SINE MIR -99 163 23 27 49 0 0 chr2 55955361 55955402 -197301181 + AT_rich Low_complexity Low_complexity 1 41 0 2898 10 0 0 chr2 55957186 55957497 -197299086 - AluY SINE Alu 0 311 1 267 326 22 0 chr2 55957666 55957758 -197298825 + MIR SINE MIR 76 169 -93 4406 80 11 2 chr2 55958539 55959111 -197297472 + LTR8 LTR ERV1 1 577 -114 520 288 23 6 chr2 55959113 55959290 -197297293 + L1ME4a LINE L1 5556 5735 -386 3379 174 44 8 chr2 55959318 55959934 -197296649 - LTR9B LTR ERV1 0 644 7 1525 207 28 6 chr2 55959952 55960275 -197296308 + MER58B DNA MER1_type 12 341 0 345 263 146 16 chr2 55960275 55960522 -197296061 + L1ME4a LINE L1 5765 6043 -78 2389 258 25 32 chr2 55960586 55961183 -197295400 + MLT1E LTR MaLR 1 593 0 2117 116 0 3 chr2 55961197 55961489 -197295094 + AluSq SINE Alu 1 291 -22 423 98 0 0 chr2 55961490 55961551 -197295032 + (CA)n Simple_repeat Simple_repeat 2 62 0 28 29 0 0 chr2 55961551 55961586 -197294997 + AT_rich Low_complexity Low_complexity 1 35 0 3966 141 71 42 chr2 55961806 55962513 -197294070 + LTR8A LTR ERV1 1 727 0 225 0 0 0 chr2 55962995 55963020 -197293563 + (A)n Simple_repeat Simple_repeat 1 25 0 765 193 7 20 chr2 55963678 55963828 -197292755 + MLT1A1 LTR MaLR 3 150 -215 3372 142 7 61 chr2 55963846 55964457 -197292126 + LTR9 LTR ERV1 2 579 -33 186 103 0 0 chr2 55964462 55964491 -197292092 + (TC)n Simple_repeat Simple_repeat 2 30 0 827 171 0 14 chr2 55964504 55964644 -197291939 + MLT1A1 LTR MaLR 170 307 -58 2310 188 127 65 chr2 55964646 55965284 -197291299 - LTR48 LTR ERV1 0 787 190 2182 141 0 0 chr2 55965284 55965596 -197290987 - AluSx SINE Alu 0 312 1 2310 188 127 65 chr2 55965596 55965661 -197290922 - LTR48 LTR ERV1 -597 190 130 2997 160 20 60 chr2 55965661 55966298 -197290285 - LTR9 LTR ERV1 0 612 1 2310 188 127 65 chr2 55966298 55966335 -197290248 - LTR48 LTR ERV1 -657 130 1 417 119 0 0 chr2 55966335 55966394 -197290189 + MLT1A1 LTR MaLR 316 374 0 739 220 191 25 chr2 55966635 55966837 -197289746 + L1MC5 LINE L1 7501 7668 -293 225 0 0 0 chr2 55966837 55966862 -197289721 + (TATG)n Simple_repeat Simple_repeat 2 26 0 739 220 191 25 chr2 55966862 55966973 -197289610 + L1MC5 LINE L1 7668 7866 -95 1074 269 194 6 chr2 55966973 55967338 -197289245 - MLT1G1 LTR MaLR -13 582 149 345 310 120 26 chr2 55967342 55967814 -197288769 + L1MC4a LINE L1 4475 4984 -1162 * 1785 230 165 12 chr2 55967805 55968497 -197288086 + L1MC4a LINE L1 5378 6175 -1633 2203 93 35 0 chr2 55968821 55969111 -197287472 + AluSq SINE Alu 1 300 -13 882 234 107 56 chr2 55969121 55969171 -197287412 + L1MC5 LINE L1 6562 6608 -1353 1856 152 54 15 chr2 55969171 55969506 -197287077 - MER7A DNA MER2_type 0 346 1 882 234 107 56 chr2 55969506 55969822 -197286761 + L1MC5 LINE L1 6608 6994 -967 4824 73 14 1 chr2 55969822 55970469 -197286114 + L1PA13 LINE L1 5506 6160 -3 882 234 107 56 chr2 55970469 55970635 -197285948 + L1MC5 LINE L1 6994 7150 -811 319 231 133 49 chr2 55970638 55970781 -197285802 + L1MC5 LINE L1 7185 7339 -622 352 247 112 0 chr2 55970781 55970870 -197285713 + MER45 DNA AcHobo 2 100 -78 1951 154 0 0 chr2 55970870 55971162 -197285421 + AluJo SINE Alu 3 294 -18 1804 146 83 37 chr2 55971162 55971512 -197285071 - THE1C LTR MaLR -4 371 6 490 215 0 19 chr2 55971514 55971704 -197284879 + GA-rich Low_complexity Low_complexity 1 186 0 325 113 57 0 chr2 55971704 55971757 -197284826 + MER45 DNA AcHobo 1518 1573 -8 2329 206 100 6 chr2 55971797 55972308 -197284275 + MLT1F1 LTR MaLR 1 559 -8 2446 81 0 0 chr2 55972368 55972677 -197283906 + AluY SINE Alu 1 309 -2 969 214 60 54 chr2 55972748 55973084 -197283499 + L1MC5 LINE L1 7549 7886 -75 303 193 159 83 chr2 55973114 55973259 -197283324 + L1MC5 LINE L1 7185 7340 -621 21 71 0 0 chr2 55973362 55973404 -197283179 + AT_rich Low_complexity Low_complexity 1 42 0 1438 133 17 37 chr2 55974389 55974515 -197282068 - AluJo SINE Alu -76 236 116 2398 168 24 0 chr2 55974515 55974931 -197281652 - MSTB LTR MaLR 0 426 1 1438 133 17 37 chr2 55974931 55975045 -197281538 - AluJo SINE Alu -196 116 1 27835 82 6 2 chr2 55975697 55980353 -197276230 + L1PA7 LINE L1 1487 6153 -1 21 0 0 0 chr2 55980367 55980388 -197276195 + AT_rich Low_complexity Low_complexity 1 21 0 1422 101 5 18 chr2 55980388 55980399 -197276184 + L1PB1 LINE L1 5814 5824 -327 2062 86 55 7 chr2 55980399 55980690 -197275893 + AluSp SINE Alu 1 305 -8 1422 101 5 18 chr2 55980690 55980896 -197275687 + L1PB1 LINE L1 5824 6028 -123 626 176 0 0 chr2 55980896 55980998 -197275585 + LTR23 LTR ERV1 299 400 -37 23 0 0 29 chr2 55980998 55981011 -197275572 + AT_rich Low_complexity Low_complexity 1 13 -20 950 97 0 0 chr2 55981011 55981145 -197275438 + L1PB1 LINE L1 6018 6151 0 23 0 0 29 chr2 55981145 55981165 -197275418 + AT_rich Low_complexity Low_complexity 13 33 0 2208 99 0 3 chr2 55981914 55982208 -197274375 - AluY SINE Alu -18 293 1 654 120 10 0 chr2 55982544 55982644 -197273939 + AluSg/x SINE Alu 201 301 -8 234 0 0 0 chr2 55982966 55982992 -197273591 + (T)n Simple_repeat Simple_repeat 1 26 0 401 296 183 5 chr2 55983840 55984026 -197272557 - MIR SINE MIR -13 249 31 396 0 0 0 chr2 55984027 55984071 -197272512 + (TG)n Simple_repeat Simple_repeat 2 45 0 2268 100 3 0 chr2 55984151 55984452 -197272131 + AluSq SINE Alu 1 302 -11 186 313 10 61 chr2 55986260 55986359 -197270224 - MIR SINE MIR -94 114 21 369 280 39 42 chr2 55987614 55987860 -197268723 + MIR3 SINE MIR 3 221 -41 2282 224 193 49 chr2 55987894 55989115 -197267468 - Charlie7 DNA MER1_type -1 2611 1215 3442 138 44 18 chr2 55989115 55989435 -197267148 + MER7C DNA MER2_type 1 344 -2684 2316 91 7 0 chr2 55989435 55989742 -197266841 - AluSx SINE Alu -3 309 1 3442 138 44 18 chr2 55989742 55989994 -197266589 + MER7C DNA MER2_type 344 588 -14 1930 230 73 21 chr2 55990006 55990611 -197265972 - Charlie7 DNA MER1_type -1396 1216 581 22 0 0 0 chr2 55990664 55990686 -197265897 + AT_rich Low_complexity Low_complexity 1 22 0 1000 163 99 75 chr2 55990686 55990814 -197265769 - L1MA9 LINE L1 -38 6274 6151 219 69 0 0 chr2 55990814 55990843 -197265740 + (TG)n Simple_repeat Simple_repeat 1 29 0 1000 163 99 75 chr2 55990843 55991008 -197265575 - L1MA9 LINE L1 -161 6151 5974 629 269 100 11 chr2 55991009 55991280 -197265303 - Charlie7 DNA MER1_type -2065 547 253 5347 114 10 4 chr2 55992416 55993224 -197263359 - L1PA13 LINE L1 -4 6159 5347 22 35 0 0 chr2 55993227 55993256 -197263327 + AT_rich Low_complexity Low_complexity 1 29 0 4296 107 40 22 chr2 55993256 55993979 -197262604 - L1MA3 LINE L1 0 6305 5570 10890 161 37 13 chr2 55993981 55994551 -197262032 - L1MA3 LINE L1 -932 5214 4659 2386 90 0 7 chr2 55994551 55994852 -197261731 + AluSg SINE Alu 1 299 -11 10890 161 37 13 chr2 55994852 55995152 -197261431 - L1MA3 LINE L1 -1487 4659 4368 2441 81 0 0 chr2 55995152 55995450 -197261133 - AluSx SINE Alu -14 298 1 10890 161 37 13 chr2 55995450 55996091 -197260492 - L1MA3 LINE L1 -1778 4368 3744 195 69 0 0 chr2 55996091 55996120 -197260463 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 10890 161 37 13 chr2 55996120 55996764 -197259819 - L1MA3 LINE L1 -2402 3744 3006 198 0 0 0 chr2 55999378 55999400 -197257183 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2129 87 7 18 chr2 55999407 55999693 -197256890 - AluSp SINE Alu -30 283 1 219 36 0 0 chr2 55999927 55999955 -197256628 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 1786 141 13 23 chr2 56000491 56000790 -197255793 - AluJo SINE Alu -16 296 1 474 230 62 7 chr2 56000863 56001026 -197255557 - MLT1I LTR MaLR -5 445 266 371 234 93 28 chr2 56001240 56001336 -197255247 - MIR SINE MIR -94 168 63 2176 67 0 0 chr2 56001336 56001620 -197254963 + L1PA7 LINE L1 5871 6154 0 22 56 0 0 chr2 56001679 56001715 -197254868 + AT_rich Low_complexity Low_complexity 1 36 0 1906 147 0 11 chr2 56002624 56002909 -197253674 + AluJb SINE Alu 1 282 -30 207 88 0 0 chr2 56002913 56002947 -197253636 + (TTAA)n Simple_repeat Simple_repeat 3 36 0 23 0 0 0 chr2 56004116 56004139 -197252444 + AT_rich Low_complexity Low_complexity 1 23 0 1197 135 20 20 chr2 56004649 56004849 -197251734 - MER20 DNA MER1_type -3 216 17 368 281 86 14 chr2 56004968 56005107 -197251476 - L2 LINE L2 -943 2371 2223 287 297 118 41 chr2 56007348 56007543 -197249040 + MIR SINE MIR 8 217 -45 1032 123 12 29 chr2 56009424 56009568 -197247015 - MER2 DNA MER2_type -139 206 64 4186 108 9 11 chr2 56009568 56010204 -197246379 + MER41B LTR ERV1 1 635 0 1032 123 12 29 chr2 56010204 56010230 -197246353 - MER2 DNA MER2_type -281 64 39 2561 240 38 28 chr2 56010230 56010867 -197245716 - MLT-int LTR MaLR -155 1580 938 3248 228 36 10 chr2 56010879 56011652 -197244931 - MSTC-int LTR MaLR -942 793 1 1229 168 114 28 chr2 56011652 56012017 -197244566 - MSTC LTR MaLR 0 428 1 1520 173 61 4 chr2 56013655 56013933 -197242650 - AluJo SINE Alu -18 294 1 21 36 0 0 chr2 56013948 56013976 -197242607 + AT_rich Low_complexity Low_complexity 1 28 0 279 182 231 74 chr2 56013976 56014097 -197242486 - MIR SINE MIR -65 197 58 374 287 0 0 chr2 56014594 56014716 -197241867 - MER103 DNA DNA -43 123 2 760 197 0 0 chr2 56016162 56016294 -197240289 + FRAM SINE Alu 37 168 -8 21 0 0 0 chr2 56016551 56016572 -197240011 + AT_rich Low_complexity Low_complexity 1 21 0 1960 138 13 0 chr2 56016755 56017059 -197239524 + AluSx SINE Alu 1 308 -4 21 0 0 0 chr2 56017126 56017147 -197239436 + AT_rich Low_complexity Low_complexity 1 21 0 929 213 87 27 chr2 56017419 56017752 -197238831 + MER31-int LTR ERV1 2455 2807 -2129 349 60 0 0 chr2 56017766 56017816 -197238767 + LTR54 LTR ERV1 412 461 -49 624 233 44 40 chr2 56018227 56018505 -197238078 - L1MDa LINE L1 -4869 1513 1134 470 284 38 60 chr2 56018717 56018900 -197237683 - MIR SINE MIR -50 212 34 297 229 114 0 chr2 56019024 56019094 -197237489 - L2 LINE L2 -91 3222 3145 1983 117 23 17 chr2 56019118 56019418 -197237165 - AluY SINE Alu -9 302 1 683 205 66 0 chr2 56019799 56019950 -197236633 + MER3 DNA MER1_type 49 209 0 297 160 0 0 chr2 56019907 56019957 -197236626 - MER3 DNA MER1_type -119 90 41 * 314 186 0 17 chr2 56019969 56020028 -197236555 + MER5A DNA MER1_type 14 71 -118 2257 81 3 23 chr2 56020033 56020343 -197236240 + AluY SINE Alu 1 304 -7 2063 145 0 3 chr2 56020353 56020663 -197235920 + AluSx SINE Alu 2 310 -2 207 167 0 0 chr2 56020682 56020718 -197235865 + MER5A DNA MER1_type 61 96 -93 2799 106 21 12 chr2 56020718 56021142 -197235441 + MSTA LTR MaLR 1 428 0 5110 163 50 15 chr2 56021142 56022088 -197234495 + MSTA-int LTR MaLR 1 979 -672 297 245 21 21 chr2 56022278 56022372 -197234211 + L1MC5 LINE L1 7832 7925 -36 1453 270 68 16 chr2 56022395 56022836 -197233747 + MLT1F LTR MaLR 1 464 -78 994 276 72 56 chr2 56022909 56023477 -197233106 - L1ME LINE L1 -5094 976 400 1818 143 16 26 chr2 56023518 56023825 -197232758 + AluJb SINE Alu 1 304 -8 281 280 17 63 chr2 56024143 56024175 -197232408 - L1ME LINE L1 -5856 214 182 1893 140 41 0 chr2 56024175 56024467 -197232116 + AluSx SINE Alu 1 304 -8 281 280 17 63 chr2 56024467 56024609 -197231974 - L1ME LINE L1 -5888 182 48 23 54 0 0 chr2 56024877 56024914 -197231669 + AT_rich Low_complexity Low_complexity 1 37 0 207 0 0 0 chr2 56025419 56025442 -197231141 + (CA)n Simple_repeat Simple_repeat 2 24 0 685 138 78 9 chr2 56025730 56025846 -197230737 + AluSq/x SINE Alu 1 124 -188 1856 163 0 0 chr2 56026304 56026598 -197229985 + AluJb SINE Alu 1 294 -18 241 235 0 0 chr2 56028845 56028896 -197227687 - Charlie8 DNA MER1_type -989 1428 1378 743 165 0 0 chr2 56029618 56029739 -197226844 + FLAM_C SINE Alu 11 131 -12 7552 124 33 51 chr2 56030165 56031362 -197225221 + L1PA16 LINE L1 1640 2857 -3992 256 122 0 0 chr2 56031362 56031403 -197225180 + U5 snRNA snRNA 12 52 -64 7552 124 33 51 chr2 56031403 56031588 -197224995 + L1PA16 LINE L1 2857 3027 -3822 2272 74 0 14 chr2 56031588 56031896 -197224687 - AluSc SINE Alu 0 304 1 7552 124 33 51 chr2 56031896 56031944 -197224639 + L1PA16 LINE L1 3027 3074 -3775 567 117 0 58 chr2 56031947 56032001 -197224582 + AluJ/FLAM SINE Alu 1 48 -264 2454 142 20 50 chr2 56032001 56032502 -197224081 + LTR19A LTR ERV1 1 486 0 567 117 0 58 chr2 56032502 56032550 -197224033 + AluJ/FLAM SINE Alu 48 97 -215 1772 131 22 47 chr2 56032550 56033096 -197223487 + MER4A LTR ERV1 1 664 0 10289 192 26 50 chr2 56033145 56033545 -197223038 + L1PA16 LINE L1 3065 3473 -3396 1609 136 8 12 chr2 56033545 56033838 -197222745 + AluSx SINE Alu 39 330 0 10289 192 26 50 chr2 56033838 56033946 -197222637 + L1PA16 LINE L1 3473 3582 -3287 1848 130 7 57 chr2 56033946 56034269 -197222314 + AluSx SINE Alu 1 308 0 10289 192 26 50 chr2 56034269 56036010 -197220573 + L1PA16 LINE L1 3582 5365 -1504 1184 132 42 0 chr2 56036010 56036200 -197220383 - L1PB1 LINE L1 -1 6150 5953 10289 192 26 50 chr2 56036200 56036993 -197219590 + L1PA16 LINE L1 5365 6002 -867 2115 112 3 3 chr2 56036993 56037287 -197219296 + AluY SINE Alu 3 296 -15 10289 192 26 50 chr2 56037287 56038133 -197218450 + L1PA16 LINE L1 6002 6868 -1 2166 119 3 3 chr2 56038931 56039234 -197217349 - AluSx SINE Alu -9 303 1 331 315 0 0 chr2 56039255 56039347 -197217236 - L1MC4 LINE L1 -1337 6705 6614 1680 126 84 0 chr2 56039366 56039648 -197216935 - AluSq SINE Alu 0 304 1 331 396 41 0 chr2 56039723 56039892 -197216691 + MIR3 SINE MIR 16 191 -17 981 268 79 8 chr2 56040046 56040311 -197216272 + AluJb SINE Alu 1 284 -18 2178 113 0 0 chr2 56040389 56040699 -197215884 - AluSx SINE Alu 0 310 1 2164 115 6 0 chr2 56043129 56043450 -197213133 - L1P4 LINE L1 -415 5746 5424 1977 115 0 24 chr2 56043795 56044106 -197212477 + AluSg SINE Alu 3 306 0 2080 120 7 3 chr2 56044326 56044626 -197211957 - AluSx SINE Alu -11 301 1 2157 111 0 10 chr2 56044636 56044934 -197211649 - AluSx SINE Alu -17 295 1 1748 140 0 0 chr2 56046119 56046376 -197210207 - AluSx SINE Alu -16 296 40 3650 103 0 4 chr2 56046386 56046899 -197209684 - MER9 LTR ERVK 0 511 1 596 204 18 9 chr2 56047148 56047261 -197209322 - L2 LINE L2 0 3313 3200 2174 130 0 0 chr2 56047592 56047893 -197208690 - AluSx SINE Alu -11 301 1 680 246 93 56 chr2 56048084 56049076 -197207507 + L1ME LINE L1 4416 5559 -603 2472 67 0 3 chr2 56049090 56049390 -197207193 + AluY SINE Alu 1 299 -12 1699 146 66 0 chr2 56049397 56049671 -197206912 + AluSx SINE Alu 5 296 -16 581 308 34 4 chr2 56049734 56049968 -197206615 + L1MEc LINE L1 35 275 -6121 210 71 0 0 chr2 56050390 56050418 -197206165 + (A)n Simple_repeat Simple_repeat 1 28 0 180 269 19 0 chr2 56050750 56050802 -197205781 + L2 LINE L2 3176 3228 -85 778 215 55 30 chr2 56051057 56051257 -197205326 - MER3 DNA MER1_type -4 205 1 1804 186 7 0 chr2 56052340 56052647 -197203936 - AluJb SINE Alu -3 309 1 21 82 0 0 chr2 56053225 56053274 -197203309 + AT_rich Low_complexity Low_complexity 1 49 0 205 243 114 29 chr2 56054004 56054074 -197202509 + MER5C DNA MER1_type 1 76 -248 332 300 75 40 chr2 56055393 56055620 -197200963 + HAL1 LINE L1 1114 1348 -1159 696 254 97 97 chr2 56055673 56055840 -197200743 + HAL1b LINE L1 392 558 -790 873 101 0 36 chr2 56055840 56055978 -197200605 - FLAM_C SINE Alu 0 133 1 696 254 97 97 chr2 56055978 56056307 -197200276 + HAL1b LINE L1 557 888 -460 2064 134 0 0 chr2 56056434 56056732 -197199851 + AluSx SINE Alu 1 298 -14 2295 82 0 35 chr2 56056768 56057087 -197199496 + AluY SINE Alu 1 308 -3 1687 145 48 31 chr2 56058693 56058982 -197197601 + AluJo SINE Alu 3 296 -16 2146 116 17 7 chr2 56059152 56059453 -197197130 - AluSq SINE Alu -9 304 1 21 0 0 0 chr2 56059813 56059834 -197196749 + AT_rich Low_complexity Low_complexity 1 21 0 2092 106 0 0 chr2 56059937 56060211 -197196372 + AluSq SINE Alu 1 274 -39 607 266 21 70 chr2 56060288 56060529 -197196054 - L2 LINE L2 0 3313 3085 432 281 36 22 chr2 56060729 56060868 -197195715 + MIR SINE MIR 122 262 0 2124 193 123 28 chr2 56061204 56061815 -197194768 + L1MC4 LINE L1 7373 8041 -1 2427 204 84 58 chr2 56061849 56062614 -197193969 + L1ME1 LINE L1 5364 6148 -18 314 293 108 36 chr2 56062645 56062812 -197193771 - MIR SINE MIR -50 212 34 26 0 0 0 chr2 56063973 56063999 -197192584 + AT_rich Low_complexity Low_complexity 1 26 0 257 323 0 0 chr2 56064770 56064863 -197191720 + L1ME LINE L1 4520 4612 -1534 2302 126 39 21 chr2 56064920 56065301 -197191282 - MER61D LTR ERV1 0 501 114 4489 191 30 40 chr2 56065680 56066308 -197190275 + L1MC3 LINE L1 6110 6724 -1061 2045 105 42 20 chr2 56066308 56066614 -197189969 - AluSq SINE Alu 0 313 1 4489 191 30 40 chr2 56066614 56067053 -197189530 + L1MC3 LINE L1 6724 7166 -619 307 301 20 48 chr2 56067251 56067397 -197189186 + MIR SINE MIR 32 173 -89 300 236 75 66 chr2 56068423 56068529 -197188054 + L1ME LINE L1 5176 5282 -864 1623 180 0 56 chr2 56068543 56068849 -197187734 + AluJo SINE Alu 1 289 -23 27 0 0 0 chr2 56068849 56068876 -197187707 + AT_rich Low_complexity Low_complexity 1 27 0 463 301 0 6 chr2 56068913 56069069 -197187514 + MLT1K LTR MaLR 434 588 0 1198 161 19 0 chr2 56069112 56069317 -197187266 + MLT2B2 LTR ERVL 2 210 -305 1913 100 2 15 chr2 56069317 56069744 -197186839 + LTR17 LTR ERV1 261 731 -49 5409 52 10 17 chr2 56069771 56070483 -197186100 + HERV17 LTR ERV1 1 707 -7919 1905 78 22 0 chr2 56070672 56070941 -197185642 + HERV17 LTR ERV1 784 1058 -7568 3613 66 0 14 chr2 56071078 56071563 -197185020 + HERV17 LTR ERV1 1537 2014 -6612 * 10038 61 5 1 chr2 56071548 56072868 -197183715 + HERV17 LTR ERV1 2430 3754 -4872 4727 59 3 0 chr2 56072847 56073460 -197183123 + HERV17 LTR ERV1 5405 6019 -2607 * 2252 61 0 3 chr2 56073481 56073774 -197182809 + HERV17 LTR ERV1 8335 8626 0 2166 95 3 6 chr2 56073774 56074099 -197182484 + LTR17 LTR ERV1 1 324 -456 1621 210 19 46 chr2 56074099 56074466 -197182117 + MLT2B3 LTR ERVL 192 548 -6 597 274 0 5 chr2 56074473 56074659 -197181924 + L1ME LINE L1 5624 5808 -313 594 263 139 67 chr2 56074678 56074845 -197181738 - L2 LINE L2 -579 2735 2582 207 0 0 0 chr2 56074845 56074868 -197181715 + (TG)n Simple_repeat Simple_repeat 2 24 0 594 263 139 67 chr2 56074868 56075016 -197181567 - L2 LINE L2 -732 2582 2397 439 267 104 15 chr2 56074992 56075127 -197181456 - MIR SINE MIR -114 148 2 * 1497 170 89 4 chr2 56075776 56076046 -197180537 + AluJb SINE Alu 4 296 -16 308 222 16 0 chr2 56076048 56076111 -197180472 - MER2 DNA MER2_type 0 345 282 * 512 250 5 92 chr2 56076087 56076283 -197180300 - MER8 DNA MER2_type -60 179 1 214 182 0 0 chr2 56076688 56076732 -197179851 + A-rich Low_complexity Low_complexity 1 44 0 390 345 91 14 chr2 56077006 56077226 -197179357 + MIR SINE MIR 20 256 -6 793 185 39 51 chr2 56077286 56077464 -197179119 + MER63B DNA MER1_type 1 176 -260 256 286 48 41 chr2 56077468 56077615 -197178968 + L2 LINE L2 3080 3227 -86 403 304 85 18 chr2 56079176 56079400 -197177183 + L1MC4 LINE L1 7803 8041 -1 450 202 0 0 chr2 56081902 56081986 -197174597 + AluJ/FLAM SINE Alu 1 84 -228 2127 87 23 17 chr2 56082238 56082537 -197174046 + AluSp SINE Alu 1 301 -12 225 0 0 0 chr2 56083172 56083197 -197173386 + (A)n Simple_repeat Simple_repeat 1 25 0 693 202 90 34 chr2 56083669 56083847 -197172736 + MER5A DNA MER1_type 1 188 -1 2098 109 7 0 chr2 56083906 56084213 -197172370 + AluSq SINE Alu 1 309 0 26 50 0 0 chr2 56084622 56084662 -197171921 + AT_rich Low_complexity Low_complexity 1 40 0 2517 42 0 0 chr2 56084860 56085147 -197171436 - AluY SINE Alu -24 287 1 417 208 38 0 chr2 56085371 56085477 -197171106 - L1PA6 LINE L1 -1 6153 6044 507 67 0 67 chr2 56085477 56085567 -197171016 - L1PA12 LINE L1 -107 6061 5978 26 30 0 0 chr2 56085952 56085985 -197170598 + AT_rich Low_complexity Low_complexity 1 33 0 2092 123 7 0 chr2 56086101 56086402 -197170181 - AluSg SINE Alu -7 303 1 2024 145 3 0 chr2 56086429 56086726 -197169857 + AluSx SINE Alu 4 301 -11 21 36 0 0 chr2 56088036 56088064 -197168519 + AT_rich Low_complexity Low_complexity 1 28 0 327 167 42 0 chr2 56088066 56088138 -197168445 - MER72 LTR ERV1 -63 659 585 2304 94 0 3 chr2 56088150 56088449 -197168134 - AluSx SINE Alu -14 298 1 294 143 0 0 chr2 56088459 56088515 -197168068 - L1MA4A LINE L1 -23 6280 6225 1554 178 10 42 chr2 56089200 56089509 -197167074 + AluJo SINE Alu 1 299 -13 2255 107 0 10 chr2 56090538 56090846 -197165737 + AluSx SINE Alu 1 305 -7 529 163 61 0 chr2 56090861 56090959 -197165624 + MER93b LTR ERV1 12 115 -258 5054 142 51 10 chr2 56090963 56092012 -197164571 - L1MA7 LINE L1 0 6291 5201 462 249 32 75 chr2 56092014 56092115 -197164468 + MER93b LTR ERV1 105 209 -164 2246 125 0 0 chr2 56092115 56092410 -197164173 - AluJb SINE Alu -17 295 1 462 249 32 75 chr2 56092410 56092589 -197163994 + MER93b LTR ERV1 209 373 0 248 272 95 41 chr2 56093008 56093155 -197163428 - L2 LINE L2 -25 3288 3134 1637 209 7 0 chr2 56093175 56093476 -197163107 + AluJo SINE Alu 5 307 -5 409 247 0 0 chr2 56093571 56093656 -197162927 - MIR SINE MIR 0 262 178 260 200 0 0 chr2 56093701 56093746 -197162837 - MIR SINE MIR -12 250 206 1940 142 7 17 chr2 56093800 56094102 -197162481 + AluJb SINE Alu 1 299 -13 2229 108 3 0 chr2 56094171 56094467 -197162116 - AluSp SINE Alu -15 298 2 1037 171 0 17 chr2 56094628 56094878 -197161705 + AluJb SINE Alu 1 310 0 1823 135 53 4 chr2 56095465 56095746 -197160837 - AluSq SINE Alu -18 295 1 700 292 129 28 chr2 56096101 56096666 -197159917 + HAL1 LINE L1 1251 1872 -635 982 134 29 12 chr2 56096908 56097080 -197159503 + MER4B LTR ERV1 432 606 -4 1995 200 24 24 chr2 56097089 56097554 -197159029 - MLT1C LTR MaLR -2 465 1 679 257 284 12 chr2 56097554 56098032 -197158551 + L2 LINE L2 2651 3279 -34 2121 112 10 7 chr2 56098234 56098538 -197158045 + AluSx SINE Alu 1 305 -7 269 26 26 0 chr2 56099799 56099837 -197156746 + (TCC)n Simple_repeat Simple_repeat 3 41 0 225 0 0 0 chr2 56101044 56101069 -197155514 + (GTTTG)n Simple_repeat Simple_repeat 5 29 0 1630 170 21 3 chr2 56101070 56101359 -197155224 - AluJo SINE Alu -6 306 13 2275 116 0 0 chr2 56101787 56102090 -197154493 + AluSg SINE Alu 1 303 -7 755 206 8 0 chr2 56102102 56102233 -197154350 - FAM SINE Alu -53 132 1 2155 139 10 0 chr2 56102410 56102719 -197153864 + AluSx SINE Alu 1 312 0 2083 107 3 17 chr2 56102782 56103071 -197153512 - AluSx SINE Alu -27 285 1 625 186 31 16 chr2 56103317 56103446 -197153137 - FLAM_C SINE Alu -12 131 1 216 0 0 0 chr2 56104580 56104604 -197151979 + (A)n Simple_repeat Simple_repeat 1 24 0 2055 70 0 21 chr2 56104604 56104890 -197151693 - AluY SINE Alu -31 280 1 451 129 301 0 chr2 56104890 56104983 -197151600 - FLAM_A SINE Alu -9 133 13 513 268 131 20 chr2 56105071 56105269 -197151314 + MIR SINE MIR 3 222 -40 1704 151 42 0 chr2 56105409 56105694 -197150889 + AluJb SINE Alu 1 297 -15 728 200 137 16 chr2 56106033 56106223 -197150360 + MER58A DNA MER1_type 1 213 -11 651 159 0 0 chr2 56106278 56106385 -197150198 - FLAM_A SINE Alu -1 141 35 1620 176 39 27 chr2 56106523 56106858 -197149725 + L1PA16 LINE L1 5808 6146 -20 2421 100 0 0 chr2 56107317 56107626 -197148957 - AluSc SINE Alu 0 309 1 195 307 136 11 chr2 56107884 56107972 -197148611 + MIR3 SINE MIR 3 101 -107 1535 129 3 65 chr2 56108784 56109078 -197147505 - L1PA15 LINE L1 -2 6163 5888 1676 195 40 7 chr2 56109121 56109423 -197147160 - AluJb SINE Alu 0 312 1 2251 121 0 9 chr2 56109553 56109868 -197146715 - AluSx SINE Alu 0 312 1 2279 85 3 0 chr2 56110588 56110882 -197145701 + AluY SINE Alu 1 295 -16 1749 166 7 20 chr2 56110943 56111239 -197145344 - AluJb SINE Alu -20 292 1 21 0 0 0 chr2 56111433 56111454 -197145129 + AT_rich Low_complexity Low_complexity 1 21 0 295 345 67 8 chr2 56112128 56112247 -197144336 + L2 LINE L2 3147 3272 0 349 296 138 25 chr2 56112661 56112748 -197143835 - MIR SINE MIR -13 249 173 581 231 151 35 chr2 56112748 56113060 -197143523 - MER7A DNA MER2_type 0 346 1 349 296 138 25 chr2 56113060 56113168 -197143415 - MIR SINE MIR -89 173 32 914 169 0 0 chr2 56115427 56115569 -197141014 - AluSg/x SINE Alu -34 276 135 1208 170 107 59 chr2 56116157 56116428 -197140155 + AluJo SINE Alu 3 286 -26 1970 147 3 6 chr2 56116521 56116833 -197139750 + AluSx SINE Alu 1 311 -1 3122 80 57 77 chr2 56116853 56116922 -197139661 - L1MA2 LINE L1 0 6304 6235 1731 156 0 70 chr2 56116922 56117249 -197139334 - AluSx SINE Alu -8 304 1 3122 80 57 77 chr2 56117249 56117663 -197138920 - L1MA2 LINE L1 -69 6235 5831 2162 90 3 84 chr2 56117663 56117995 -197138588 - AluSx SINE Alu -7 305 1 3122 80 57 77 chr2 56117995 56118058 -197138525 - L1MA2 LINE L1 -473 5831 5768 862 146 0 0 chr2 56118066 56118189 -197138394 - FLAM_C SINE Alu -18 125 3 2955 80 3 0 chr2 56118195 56118581 -197138002 - L1MA2 LINE L1 -523 5781 5395 235 349 84 16 chr2 56119530 56119779 -197136804 + L2 LINE L2 2476 2741 -573 1105 116 0 0 chr2 56120085 56120231 -197136352 - AluSg/x SINE Alu -18 292 147 1821 145 35 0 chr2 56120398 56120518 -197136065 + AluSx SINE Alu 1 115 -197 261 0 0 0 chr2 56120518 56120547 -197136036 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1821 145 35 0 chr2 56120547 56120715 -197135868 + AluSx SINE Alu 115 299 -13 942 101 0 0 chr2 56121483 56121602 -197134981 - FLAM_C SINE Alu -24 119 1 948 163 0 19 chr2 56122272 56122432 -197134151 + AluSg/x SINE Alu 130 286 -24 2173 85 28 11 chr2 56122447 56122730 -197133853 + AluSx SINE Alu 1 288 -24 905 135 0 0 chr2 56122861 56122987 -197133596 + FLAM_C SINE Alu 1 126 -17 216 0 0 0 chr2 56123430 56123454 -197133129 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 667 286 123 17 chr2 56123705 56124157 -197132426 - L1MC4a LINE L1 -216 5905 5462 901 234 90 5 chr2 56124237 56124459 -197132124 - MIR SINE MIR -20 242 2 2149 104 13 3 chr2 56124586 56124884 -197131699 - AluSp SINE Alu -8 305 5 215 175 32 48 chr2 56124955 56125018 -197131565 + GA-rich Low_complexity Low_complexity 2 63 0 594 236 192 5 chr2 56125901 56126109 -197130474 + MIR SINE MIR 2 248 -14 1236 53 20 0 chr2 56126465 56126616 -197129967 - L1PA2 LINE L1 -1 6154 6001 23 33 0 0 chr2 56127064 56127094 -197129489 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr2 56127402 56127432 -197129151 + AT_rich Low_complexity Low_complexity 1 30 0 2511 84 3 0 chr2 56127669 56127979 -197128604 - AluSx SINE Alu -1 311 1 1112 220 47 32 chr2 56128089 56128366 -197128217 - L1ME3 LINE L1 -1 6956 6676 1043 158 0 0 chr2 56128410 56128575 -197128008 - L1MA4A LINE L1 -1 6302 6138 826 172 0 15 chr2 56128661 56128795 -197127788 - FLAM_C SINE Alu -3 140 9 919 168 0 0 chr2 56128796 56128933 -197127650 - AluSc SINE Alu -53 256 120 2283 99 0 10 chr2 56128939 56129243 -197127340 - AluSx SINE Alu -11 301 1 608 217 46 17 chr2 56129244 56129419 -197127164 - L1ME3 LINE L1 -950 5991 5812 * 804 260 134 12 chr2 56129409 56129797 -197126786 - L1ME3 LINE L1 -4899 1524 1501 2297 113 0 0 chr2 56129797 56130106 -197126477 - AluY SINE Alu -2 309 1 804 260 134 12 chr2 56130106 56130227 -197126356 - L1ME3 LINE L1 -4922 1501 1396 559 180 90 41 chr2 56131732 56131854 -197124729 - FLAM_A SINE Alu -3 139 12 2205 198 138 43 chr2 56131923 56132581 -197124002 - MER21B LTR ERV1 -45 818 98 341 293 0 0 chr2 56132649 56132724 -197123859 - MER21B LTR ERV1 -768 95 21 361 314 88 13 chr2 56132730 56132889 -197123694 + MIR SINE MIR 65 235 -27 2009 140 3 3 chr2 56132955 56133247 -197123336 - AluSx SINE Alu -20 292 1 818 120 60 0 chr2 56133543 56133676 -197122907 + FAM SINE Alu 29 169 -16 231 261 34 80 chr2 56133933 56133958 -197122625 + MER5A DNA MER1_type 78 103 -86 2305 102 3 0 chr2 56133958 56134251 -197122332 - AluSg SINE Alu -16 294 1 231 261 34 80 chr2 56134251 56134313 -197122270 + MER5A DNA MER1_type 103 161 -28 1930 150 7 0 chr2 56134547 56134854 -197121729 - AluJo SINE Alu -3 309 1 920 168 0 0 chr2 56135187 56135336 -197121247 - FRAM SINE Alu -22 154 6 404 233 50 3 chr2 56135465 56135625 -197120958 - 7SLRNA srpRNA srpRNA -106 214 6 439 280 200 0 chr2 56135726 56135951 -197120632 + Charlie7 DNA MER1_type 32 301 -2311 2395 86 0 0 chr2 56136029 56136330 -197120253 + AluSx SINE Alu 3 303 -9 2241 96 3 16 chr2 56136472 56136785 -197119798 + AluSp SINE Alu 2 310 -3 2083 96 7 0 chr2 56137017 56137326 -197119257 - AluSp SINE Alu 0 311 1 729 176 0 17 chr2 56137616 56137735 -197118848 - AluJo SINE Alu -176 136 20 36 0 0 0 chr2 56137840 56137876 -197118707 + AT_rich Low_complexity Low_complexity 1 36 0 1852 164 3 0 chr2 56137895 56138193 -197118390 + AluJo SINE Alu 1 299 -13 2325 69 7 3 chr2 56138198 56138489 -197118094 + AluSc SINE Alu 1 292 -17 283 86 0 0 chr2 56138564 56138599 -197117984 + U2 snRNA snRNA 1 35 -153 183 182 0 0 chr2 56139060 56139093 -197117490 + L2 LINE L2 3281 3313 0 1837 179 0 3 chr2 56140087 56140388 -197116195 + AluJb SINE Alu 1 300 -12 370 278 90 0 chr2 56140921 56141054 -197115529 - L2 LINE L2 0 3313 3169 1361 224 35 43 chr2 56141067 56141437 -197115146 + MLT1A2 LTR MaLR 4 370 -4 1843 314 49 13 chr2 56141535 56142320 -197114263 - L2 LINE L2 -270 3002 2190 2220 100 10 3 chr2 56142737 56143046 -197113537 - AluSx SINE Alu -1 311 1 942 105 0 0 chr2 56143296 56143420 -197113163 - AluSq/x SINE Alu -188 124 1 693 146 173 0 chr2 56143441 56143551 -197113032 - FLAM_C SINE Alu -4 129 1 1724 172 3 16 chr2 56143799 56144102 -197112481 - AluJo SINE Alu -13 299 1 667 307 55 14 chr2 56144458 56144748 -197111835 + L1M4 LINE L1 2644 2945 -3201 2387 81 7 3 chr2 56144822 56145120 -197111463 + AluSx SINE Alu 1 299 -13 744 283 105 16 chr2 56145175 56145476 -197111107 + MLT1I LTR MaLR 86 409 0 6680 134 21 19 chr2 56145502 56145761 -197110822 + L1MA8 LINE L1 4117 4374 -1917 1804 174 26 10 chr2 56145761 56146065 -197110518 + AluJb SINE Alu 1 309 -3 6680 134 21 19 chr2 56146065 56147094 -197109489 + L1MA8 LINE L1 4374 5411 -880 2213 57 6 70 chr2 56147094 56147410 -197109173 + AluY SINE Alu 1 296 -15 6680 134 21 19 chr2 56147410 56148248 -197108335 + L1MA8 LINE L1 5411 6246 -45 2567 51 0 0 chr2 56148250 56148545 -197108038 - AluY SINE Alu -16 295 1 2795 140 29 0 chr2 56148566 56148980 -197107603 + MSTB LTR MaLR 1 426 0 1041 231 163 58 chr2 56149011 56149028 -197107555 + L1M4 LINE L1 3256 3270 -2876 2192 122 0 0 chr2 56149028 56149351 -197107232 + AluSx SINE Alu 1 312 0 1041 231 163 58 chr2 56149351 56149841 -197106742 + L1M4 LINE L1 3270 3707 -2439 1217 192 131 4 chr2 56149841 56150101 -197106482 - AluJb SINE Alu -19 293 1 1041 231 163 58 chr2 56150101 56150189 -197106394 + L1M4 LINE L1 3707 3784 -2362 2376 77 0 3 chr2 56150189 56150489 -197106094 + AluY SINE Alu 1 299 -12 1041 231 163 58 chr2 56150489 56150745 -197105838 + L1M4 LINE L1 3784 4198 -1948 1743 176 33 0 chr2 56150752 56151053 -197105530 + AluJb SINE Alu 2 312 0 2067 126 10 0 chr2 56151293 56151587 -197104996 + AluSx SINE Alu 1 297 -15 757 158 34 7 chr2 56151633 56151779 -197104804 - L1MA7 LINE L1 -2 6289 6140 268 333 145 7 chr2 56151807 56151945 -197104638 - MIR SINE MIR -102 160 4 636 128 0 46 chr2 56152015 56152052 -197104531 - U13 snRNA snRNA 0 104 67 1992 137 153 26 chr2 56152052 56152432 -197104151 + MSTA LTR MaLR 1 428 0 636 128 0 46 chr2 56152432 56152503 -197104080 - U13 snRNA snRNA -37 67 1 1068 139 139 6 chr2 56152875 56153055 -197103528 + AluJb SINE Alu 87 290 -22 586 211 32 0 chr2 56153063 56153219 -197103364 + GA-rich Low_complexity Low_complexity 1 161 0 983 75 5 43 chr2 56153220 56153407 -197103176 + (GGGGA)n Simple_repeat Simple_repeat 1 180 0 252 0 0 0 chr2 56153407 56153435 -197103148 + (GGAGA)n Simple_repeat Simple_repeat 1 28 0 423 273 48 80 chr2 56153749 56153998 -197102585 + L1MEd LINE L1 516 756 -5363 2294 99 3 10 chr2 56154097 56154411 -197102172 - AluSp SINE Alu 0 313 2 1466 147 5 0 chr2 56154469 56154687 -197101896 - AluSg/x SINE Alu -7 303 85 339 167 0 0 chr2 56154688 56154736 -197101847 - Alu SINE Alu -255 48 1 490 245 140 46 chr2 56154759 56154915 -197101668 + L1MEd LINE L1 939 1079 -5231 2470 66 7 0 chr2 56154915 56155217 -197101366 + AluY SINE Alu 2 305 -6 490 245 140 46 chr2 56155217 56155498 -197101085 + L1MEd LINE L1 1079 1427 -4883 2286 107 0 3 chr2 56155498 56155798 -197100785 - AluSx SINE Alu -13 299 1 490 245 140 46 chr2 56155798 56155852 -197100731 + L1MEd LINE L1 1427 1475 -4835 216 0 0 0 chr2 56155860 56155884 -197100699 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 621 129 43 0 chr2 56155985 56156078 -197100505 + AluJb SINE Alu 208 304 -8 332 287 43 0 chr2 56156082 56156197 -197100386 + L1MEd LINE L1 1550 1669 -4641 1492 178 66 14 chr2 56156239 56156525 -197100058 + AluJo SINE Alu 1 301 -11 315 71 0 0 chr2 56156528 56156570 -197100013 + (GGAA)n Simple_repeat Simple_repeat 4 45 0 31 0 0 0 chr2 56156653 56156684 -197099899 + AT_rich Low_complexity Low_complexity 1 31 0 1609 136 23 68 chr2 56156685 56156993 -197099590 + AluJo SINE Alu 1 294 -18 1428 158 50 60 chr2 56157034 56157332 -197099251 + AluJb SINE Alu 1 295 -17 521 290 162 35 chr2 56157769 56157920 -197098663 + L2 LINE L2 2707 2837 -476 2101 125 7 0 chr2 56157920 56158216 -197098367 - AluSx SINE Alu -10 302 5 521 290 162 35 chr2 56158216 56158463 -197098120 + L2 LINE L2 2837 3139 -174 1132 120 188 0 chr2 56158505 56158697 -197097886 + Tigger7 DNA MER2_type 2345 2572 -15 353 212 239 0 chr2 56158727 56158840 -197097743 + L2 LINE L2 3173 3312 -1 2299 111 0 0 chr2 56159050 56159357 -197097226 - AluSx SINE Alu -5 307 1 22 94 0 0 chr2 56159385 56159449 -197097134 + AT_rich Low_complexity Low_complexity 1 64 0 1441 169 52 15 chr2 56159908 56160175 -197096408 - AluJb SINE Alu -9 303 27 2233 100 21 0 chr2 56160313 56160604 -197095979 + AluSx SINE Alu 1 297 -15 900 78 0 0 chr2 56161273 56161389 -197095194 + FLAM_C SINE Alu 19 134 -9 271 175 20 5 chr2 56162203 56162259 -197094324 - AluSq/x SINE Alu -157 145 105 2109 120 7 7 chr2 56162450 56162751 -197093832 + AluSg SINE Alu 1 301 -9 207 162 0 0 chr2 56162751 56162788 -197093795 + GA-rich Low_complexity Low_complexity 1 37 0 2127 138 0 0 chr2 56163071 56163369 -197093214 + AluSx SINE Alu 1 298 -14 1954 116 45 3 chr2 56164017 56164309 -197092274 + AluSx SINE Alu 1 304 -8 2316 106 6 3 chr2 56164346 56164658 -197091925 - AluSq SINE Alu 0 313 1 2556 83 0 0 chr2 56164855 56165168 -197091415 + AluSp SINE Alu 1 313 0 857 161 0 0 chr2 56165180 56165304 -197091279 - FLAM_A SINE Alu -9 124 1 772 197 0 0 chr2 56167671 56167793 -197088790 - FLAM_A SINE Alu -11 122 1 259 341 35 0 chr2 56168744 56168829 -197087754 - L2 LINE L2 0 3313 3226 2885 9 0 12 chr2 56169620 56169940 -197086643 - AluYb8 SINE Alu -2 316 1 842 178 0 0 chr2 56170422 56170551 -197086032 - FLAM_C SINE Alu -14 129 1 747 241 169 0 chr2 56170636 56170843 -197085740 - MIR SINE MIR -14 248 7 364 224 10 61 chr2 56170891 56170989 -197085594 - MIR SINE MIR -16 246 154 369 0 0 0 chr2 56171076 56171117 -197085466 + (CA)n Simple_repeat Simple_repeat 2 42 0 277 220 80 70 chr2 56171875 56171975 -197084608 - MIR SINE MIR -76 186 86 379 269 223 56 chr2 56172360 56172787 -197083796 + L1M2 LINE L1 863 1360 -5489 191 81 54 0 chr2 56173804 56173841 -197082742 + A-rich Low_complexity Low_complexity 2 40 0 234 290 65 0 chr2 56174637 56174730 -197081853 + L1ME LINE L1 5687 5785 -336 1526 144 133 4 chr2 56174808 56175071 -197081512 - AluJo SINE Alu -15 297 1 21 0 0 0 chr2 56175071 56175092 -197081491 + AT_rich Low_complexity Low_complexity 1 21 0 184 122 0 73 chr2 56175165 56175206 -197081377 - L3 LINE CR1 -303 1274 1237 222 224 30 75 chr2 56175661 56175728 -197080855 + MER5A DNA MER1_type 10 73 -116 203 194 250 14 chr2 56175691 56175763 -197080820 - MER5A DNA MER1_type -25 164 76 * 237 283 43 51 chr2 56175764 56175902 -197080681 + MER5B DNA MER1_type 3 139 -39 1728 157 11 14 chr2 56176112 56176392 -197080191 + AluSx SINE Alu 4 282 -30 703 201 115 0 chr2 56176439 56176613 -197079970 + MER3 DNA MER1_type 16 209 0 278 196 0 0 chr2 56176570 56176626 -197079957 - MER3 DNA MER1_type -119 90 35 * 23 33 0 0 chr2 56177409 56177439 -197079144 + AT_rich Low_complexity Low_complexity 1 30 0 1696 165 3 41 chr2 56179750 56179896 -197076687 + AluJb SINE Alu 1 151 -161 1830 163 20 0 chr2 56179896 56180196 -197076387 + AluSx SINE Alu 1 306 -6 1696 165 3 41 chr2 56180196 56180364 -197076219 + AluJb SINE Alu 151 303 -9 1787 162 21 3 chr2 56180848 56181132 -197075451 + AluSx SINE Alu 1 289 -23 579 60 84 6 chr2 56181132 56181298 -197075285 + (TA)n Simple_repeat Simple_repeat 2 180 0 2274 96 13 22 chr2 56183036 56183349 -197073234 - AluY SINE Alu -1 310 1 862 107 7 50 chr2 56183469 56183609 -197072974 - AluJo SINE Alu -178 134 1 249 284 35 26 chr2 56183616 56183732 -197072851 - L1ME LINE L1 -460 5661 5545 2272 78 3 14 chr2 56183932 56184227 -197072356 - AluY SINE Alu -19 292 1 2245 97 3 0 chr2 56184406 56184696 -197071887 + AluSq SINE Alu 1 291 -22 21 0 0 0 chr2 56185154 56185175 -197071408 + AT_rich Low_complexity Low_complexity 1 21 0 1555 191 0 4 chr2 56185175 56185442 -197071141 + AluJb SINE Alu 44 309 -3 22 56 0 0 chr2 56185547 56185583 -197071000 + AT_rich Low_complexity Low_complexity 1 36 0 2438 66 7 3 chr2 56185632 56185933 -197070650 + AluY SINE Alu 1 302 -9 182 257 68 40 chr2 56186450 56186524 -197070059 - MIR SINE MIR -96 166 91 1523 223 14 7 chr2 56186637 56186933 -197069650 - AluJo SINE Alu -14 298 1 2058 112 10 13 chr2 56187332 56187635 -197068948 + AluSq SINE Alu 1 302 -11 235 221 59 0 chr2 56188089 56188155 -197068428 - MIR SINE MIR -105 103 36 782 250 96 57 chr2 56188532 56189165 -197067418 - L1MC5 LINE L1 -48 7913 7256 1751 169 16 29 chr2 56189387 56189694 -197066889 - AluJo SINE Alu -7 305 3 22 0 0 0 chr2 56189781 56189803 -197066780 + AT_rich Low_complexity Low_complexity 1 22 0 1127 168 32 50 chr2 56189882 56190102 -197066481 + AluJo SINE Alu 81 296 -16 824 185 22 38 chr2 56190218 56190469 -197066114 - MER31B LTR ERV1 -193 292 1 394 306 144 33 chr2 56190596 56190761 -197065822 + L1MC/D LINE L1 5417 5562 -2246 6933 112 18 15 chr2 56190761 56191829 -197064754 + MER11C LTR ERVK 1 1071 0 394 306 144 33 chr2 56191829 56191996 -197064587 + L1MC/D LINE L1 5562 5786 -2022 830 123 0 0 chr2 56192391 56192505 -197064078 + AluJb SINE Alu 199 312 0 1031 179 22 36 chr2 56192848 56193071 -197063512 + AluJo SINE Alu 1 220 -92 281 306 122 14 chr2 56194129 56194276 -197062307 - MIR SINE MIR -41 221 59 1849 128 57 0 chr2 56194276 56194557 -197062026 - AluSx SINE Alu -15 297 1 202 143 24 0 chr2 56194685 56194727 -197061856 + (TA)n Simple_repeat Simple_repeat 2 44 0 235 236 56 11 chr2 56194840 56194929 -197061654 + L1ME LINE L1 5620 5712 -409 206 309 0 0 chr2 56194938 56194993 -197061590 - MIR SINE MIR -10 252 198 694 280 10 21 chr2 56195142 56195335 -197061248 - MIR SINE MIR -59 203 13 214 71 48 24 chr2 56195568 56195610 -197060973 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 24 32 0 0 chr2 56195865 56195896 -197060687 + AT_rich Low_complexity Low_complexity 1 31 0 1228 160 156 12 chr2 56195916 56196160 -197060423 + AluJo SINE Alu 12 290 -22 718 270 66 87 chr2 56196351 56196684 -197059899 + L2 LINE L2 2072 2397 -917 2459 86 0 0 chr2 56196880 56197182 -197059401 - AluSc SINE Alu -7 302 1 3156 172 95 44 chr2 56198634 56198799 -197057784 + L1MB4 LINE L1 5152 5307 -873 1535 147 87 4 chr2 56198799 56199051 -197057532 + AluJo SINE Alu 1 273 -39 3156 172 95 44 chr2 56199051 56199858 -197056725 + L1MB4 LINE L1 5307 6180 0 1485 176 73 0 chr2 56201566 56201838 -197054745 - AluJo SINE Alu -20 292 1 2059 134 6 29 chr2 56201880 56202231 -197054352 + MER2 DNA MER2_type 2 344 0 261 105 0 0 chr2 56202600 56202638 -197053945 - L1P5 LINE L1 -263 5888 5851 1629 206 3 3 chr2 56202993 56203280 -197053303 - AluJo SINE Alu -25 287 1 1958 159 3 0 chr2 56203419 56203720 -197052863 + AluSx SINE Alu 1 302 -10 339 291 220 0 chr2 56203959 56204100 -197052483 - MER5A DNA MER1_type -6 183 12 480 129 12 0 chr2 56204114 56204199 -197052384 + L1MA4 LINE L1 6204 6289 -11 23 33 0 0 chr2 56204211 56204241 -197052342 + AT_rich Low_complexity Low_complexity 1 30 0 1674 133 37 37 chr2 56204252 56204552 -197052031 + AluSg SINE Alu 1 300 -10 239 154 15 0 chr2 56204563 56204628 -197051955 + GA-rich Low_complexity Low_complexity 3 68 0 238 320 76 25 chr2 56205043 56205240 -197051343 - MER102a DNA MER1_type -9 321 115 1061 153 34 80 chr2 56205959 56206221 -197050362 + MER2 DNA MER2_type 1 250 -95 1981 173 0 0 chr2 56206938 56207245 -197049338 - AluJb SINE Alu -5 307 1 446 210 28 66 chr2 56208846 56209027 -197047556 - L1MC4 LINE L1 -228 7814 7641 228 119 17 51 chr2 56209024 56209083 -197047500 + L1MC4 LINE L1 7610 7666 -376 * 231 273 34 0 chr2 56209106 56209194 -197047389 - HAL1b LINE L1 -24 1324 1234 285 344 21 11 chr2 56209741 56209834 -197046749 + L2 LINE L2 2926 3019 -253 2294 90 10 3 chr2 56209841 56210142 -197046441 - AluSp SINE Alu -10 303 1 351 0 0 0 chr2 56211307 56211346 -197045237 + (CA)n Simple_repeat Simple_repeat 1 39 0 2021 133 3 3 chr2 56211739 56212039 -197044544 - AluJb SINE Alu -12 300 1 2153 124 0 0 chr2 56212209 56212499 -197044084 + AluSx SINE Alu 1 290 -22 1109 174 55 4 chr2 56212714 56212950 -197043633 + L1MB5 LINE L1 5815 6062 -112 1091 173 153 52 chr2 56212950 56213199 -197043384 + AluJo SINE Alu 1 274 -38 390 221 61 15 chr2 56213227 56213358 -197043225 + L1MB7 LINE L1 6048 6184 0 1801 189 10 0 chr2 56214461 56214758 -197041825 + AluJb SINE Alu 1 300 -12 213 272 94 72 chr2 56215075 56215255 -197041328 + L2 LINE L2 1777 1960 -1354 658 196 105 87 chr2 56215347 56215566 -197041017 - MER58A DNA MER1_type 0 224 2 268 268 104 18 chr2 56216515 56216679 -197039904 + L1MC4 LINE L1 7864 8041 -1 2302 82 3 0 chr2 56217384 56217676 -197038907 + AluSx SINE Alu 5 297 -15 1895 98 49 18 chr2 56217718 56218003 -197038580 - AluSx SINE Alu -18 294 1 1360 175 9 5 chr2 56218092 56218315 -197038268 + AluJo SINE Alu 1 224 -88 865 194 0 63 chr2 56218342 56218517 -197038066 + FRAM SINE Alu 10 173 -3 986 173 0 16 chr2 56218517 56218702 -197037881 - MER46A DNA MER2_type -25 211 30 24 32 0 0 chr2 56221737 56221768 -197034815 + AT_rich Low_complexity Low_complexity 1 31 0 1786 138 0 34 chr2 56222351 56222662 -197033921 + AluSx SINE Alu 1 301 0 793 223 160 10 chr2 56224787 56224993 -197031590 - MER8 DNA MER2_type -1 238 2 1468 182 3 30 chr2 56225131 56225427 -197031156 - AluJo SINE Alu -12 300 13 2210 101 3 0 chr2 56227274 56227562 -197029021 + AluSg SINE Alu 1 289 -21 1681 186 3 14 chr2 56227828 56228124 -197028459 + AluJo SINE Alu 1 293 -19 702 124 67 0 chr2 56228128 56228233 -197028350 + FLAM_C SINE Alu 6 117 -26 1980 149 0 14 chr2 56228462 56228757 -197027826 + AluSq SINE Alu 1 291 -22 1184 114 28 0 chr2 56228759 56228935 -197027648 + AluSg/x SINE Alu 120 300 -10 24 85 0 0 chr2 56229675 56229734 -197026849 + AT_rich Low_complexity Low_complexity 1 59 0 36 62 0 0 chr2 56229746 56229810 -197026773 + AT_rich Low_complexity Low_complexity 1 64 0 1339 163 56 20 chr2 56231014 56231266 -197025317 - AluJb SINE Alu -3 309 49 21 36 0 0 chr2 56232503 56232531 -197024052 + AT_rich Low_complexity Low_complexity 1 28 0 1648 84 0 0 chr2 56234016 56234218 -197022365 - AluSg SINE Alu -108 202 1 2694 10 0 0 chr2 56234260 56234554 -197022029 + AluYa5 SINE Alu 1 294 -17 2270 83 33 0 chr2 56234564 56234865 -197021718 + AluY SINE Alu 1 311 0 2070 132 30 0 chr2 56236314 56236617 -197019966 + AluSx SINE Alu 1 312 0 1121 55 0 0 chr2 56237298 56237443 -197019140 - L1PA5 LINE L1 -1 6153 6009 2401 220 61 29 chr2 56237448 56238072 -197018511 + MER82 DNA MER2_type 1 644 -9 1791 136 0 26 chr2 56239065 56239337 -197017246 + AluSx SINE Alu 1 265 -47 2187 125 6 3 chr2 56239365 56239676 -197016907 + AluSx SINE Alu 1 312 0 2064 128 3 13 chr2 56240338 56240643 -197015940 + AluSx SINE Alu 1 302 -10 23 68 0 0 chr2 56240653 56240697 -197015886 + AT_rich Low_complexity Low_complexity 1 44 0 1345 154 141 30 chr2 56241134 56241439 -197015144 + MER44D DNA MER2_type 1 609 0 2128 123 0 3 chr2 56241556 56241857 -197014726 + AluSx SINE Alu 1 300 -12 1452 188 11 15 chr2 56241985 56242256 -197014327 - AluJb SINE Alu -30 282 13 2109 124 0 0 chr2 56242409 56242734 -197013849 + AluSx SINE Alu 1 325 0 191 245 208 0 chr2 56243428 56243481 -197013102 + MIR SINE MIR 38 101 -107 2112 100 28 0 chr2 56243669 56243959 -197012624 + AluSq SINE Alu 1 298 -15 23 0 0 0 chr2 56245159 56245182 -197011401 + AT_rich Low_complexity Low_complexity 1 23 0 2076 87 8 0 chr2 56245812 56246077 -197010506 + AluSx SINE Alu 44 310 -2 1471 186 14 21 chr2 56246077 56246355 -197010228 - AluJo SINE Alu -35 277 1 26 0 0 0 chr2 56247904 56247930 -197008653 + AT_rich Low_complexity Low_complexity 1 26 0 1088 130 6 12 chr2 56248571 56248740 -197007843 - AluSg/x SINE Alu -16 296 129 1624 192 27 10 chr2 56250389 56250681 -197005902 + AluJb SINE Alu 1 297 -15 244 307 139 0 chr2 56250936 56251037 -197005546 + MIR3 SINE MIR 92 206 -2 763 187 0 8 chr2 56251148 56251282 -197005301 - FLAM_A SINE Alu 0 133 1 198 265 44 0 chr2 56251706 56251774 -197004809 - MIR SINE MIR -68 140 70 30 59 0 0 chr2 56252029 56252080 -197004503 + AT_rich Low_complexity Low_complexity 1 51 0 787 178 0 7 chr2 56252117 56252252 -197004331 + AluJo SINE Alu 1 134 -178 866 74 27 0 chr2 56253525 56253674 -197002909 + (TA)n Simple_repeat Simple_repeat 2 154 0 411 273 218 27 chr2 56255150 56255370 -197001213 + MIR SINE MIR 1 262 0 2288 97 0 16 chr2 56256233 56256541 -197000042 + AluSq SINE Alu 2 304 -9 2054 132 0 7 chr2 56256837 56257133 -196999450 - AluSx SINE Alu -18 294 1 25 65 0 0 chr2 56257141 56257187 -196999396 + AT_rich Low_complexity Low_complexity 1 46 0 22 0 0 0 chr2 56257653 56257675 -196998908 + AT_rich Low_complexity Low_complexity 1 22 0 291 331 19 5 chr2 56258140 56258262 -196998321 + GA-rich Low_complexity Low_complexity 1 123 0 265 216 196 10 chr2 56258536 56258633 -196997950 + MER20B DNA MER1_type 669 783 0 318 119 0 0 chr2 56259087 56259129 -196997454 + 5S rRNA rRNA 1 42 -79 1654 136 7 61 chr2 56259287 56259581 -196997002 + AluJb SINE Alu 1 278 -34 324 120 0 0 chr2 56259584 56259634 -196996949 + (GGAA)n Simple_repeat Simple_repeat 3 52 0 2351 76 0 3 chr2 56260097 56260398 -196996185 + AluY SINE Alu 1 300 -11 2189 115 0 0 chr2 56260407 56260702 -196995881 + AluSx SINE Alu 1 295 -17 639 179 4 32 chr2 56261951 56262119 -196994464 + L1MB1 LINE L1 5644 5803 -365 1276 169 160 0 chr2 56262241 56262552 -196994031 + L1MB1 LINE L1 5801 6164 -7 1764 154 0 36 chr2 56262666 56262972 -196993611 + AluJb SINE Alu 1 295 -17 21 0 0 0 chr2 56263126 56263147 -196993436 + AT_rich Low_complexity Low_complexity 1 21 0 2430 84 3 0 chr2 56263233 56263542 -196993041 + AluSp SINE Alu 1 310 -3 2122 114 0 3 chr2 56263757 56264054 -196992529 - AluSg SINE Alu -13 297 2 1241 147 45 9 chr2 56264288 56264512 -196992071 + MER46A DNA MER2_type 1 232 -4 922 97 0 24 chr2 56264827 56264951 -196991632 + AluSq/x SINE Alu 1 121 -192 2009 96 0 11 chr2 56264951 56265233 -196991350 + AluSc SINE Alu 18 296 -13 257 65 0 0 chr2 56265323 56265354 -196991229 - MER1B DNA MER1_type 0 339 309 * 1333 158 0 23 chr2 56265353 56265574 -196991009 - MER1B DNA MER1_type -79 218 3 351 163 303 6 chr2 56265866 56266044 -196990539 + L1M4 LINE L1 5100 5330 -816 781 150 36 14 chr2 56266046 56266186 -196990397 + FLAM_C SINE Alu 1 143 0 2332 89 0 0 chr2 56266721 56267024 -196989559 + AluSg SINE Alu 1 303 -7 744 160 0 8 chr2 56267031 56267150 -196989433 + FLAM_C SINE Alu 1 118 -15 23 54 0 0 chr2 56267156 56267193 -196989390 + AT_rich Low_complexity Low_complexity 1 37 0 1932 137 10 7 chr2 56267230 56267522 -196989061 + AluSx SINE Alu 1 293 -19 1631 181 31 7 chr2 56267571 56267859 -196988724 + AluJb SINE Alu 1 295 -17 1072 114 102 0 chr2 56267984 56268160 -196988423 - MER30 DNA MER1_type -36 194 1 1493 211 6 10 chr2 56268313 56268626 -196987957 + AluJo SINE Alu 1 312 0 823 117 0 117 chr2 56268656 56268810 -196987773 + AluJo SINE Alu 1 136 -176 216 0 0 0 chr2 56268810 56268834 -196987749 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2178 99 7 3 chr2 56268920 56269214 -196987369 + AluSq SINE Alu 1 295 -18 1156 122 0 0 chr2 56269258 56269414 -196987169 - AluSg/x SINE Alu -24 286 131 21 71 0 0 chr2 56269417 56269459 -196987124 + AT_rich Low_complexity Low_complexity 1 42 0 429 240 60 13 chr2 56269684 56269834 -196986749 + L1MC5 LINE L1 6960 7116 -845 2803 122 98 42 chr2 56269838 56270338 -196986245 - MER1A DNA MER1_type 0 529 2 277 178 208 50 chr2 56270381 56270482 -196986101 + L1MC5 LINE L1 7165 7281 -680 1835 101 8 0 chr2 56270632 56270880 -196985703 + AluSx SINE Alu 56 305 -7 1243 128 0 0 chr2 56270880 56271059 -196985524 + AluSg/x SINE Alu 132 310 0 21 0 0 0 chr2 56271486 56271507 -196985076 + AT_rich Low_complexity Low_complexity 1 21 0 1278 167 20 159 chr2 56271708 56272061 -196984522 + AluYb8 SINE Alu 2 305 -3 2201 114 3 0 chr2 56272791 56273090 -196983493 + AluSx SINE Alu 1 300 -12 2086 126 3 0 chr2 56273499 56273800 -196982783 + AluSx SINE Alu 1 302 -10 1654 151 17 41 chr2 56274061 56274353 -196982230 + AluJb SINE Alu 2 286 -26 4945 40 5 0 chr2 56274371 56274949 -196981634 - LTR10C LTR ERV1 0 591 11 2140 108 3 3 chr2 56275404 56275699 -196980884 + AluSc SINE Alu 1 295 -14 1299 200 3 57 chr2 56275714 56276029 -196980554 + AluJo SINE Alu 9 306 -6 437 202 206 34 chr2 56276467 56276700 -196979883 + L1MC5 LINE L1 7655 7927 -34 608 170 30 0 chr2 56276918 56277018 -196979565 + L1MC1 LINE L1 6231 6333 0 273 29 0 0 chr2 56277760 56277794 -196978789 + (CA)n Simple_repeat Simple_repeat 2 35 0 1702 116 123 4 chr2 56277920 56278188 -196978395 - AluSx SINE Alu -11 301 2 2189 104 0 26 chr2 56278336 56278645 -196977938 - AluSg SINE Alu -9 301 1 1873 147 7 10 chr2 56278684 56278983 -196977600 + AluSx SINE Alu 11 308 -4 1166 147 0 11 chr2 56279053 56279230 -196977353 + AluSx SINE Alu 1 175 -137 2024 97 31 14 chr2 56279367 56279655 -196976928 - AluSg SINE Alu -1 309 17 1955 97 42 32 chr2 56280044 56280353 -196976230 + AluSx SINE Alu 1 312 0 313 286 82 68 chr2 56280614 56280664 -196975919 - MIR3 SINE MIR -5 203 155 2205 118 0 7 chr2 56280664 56280968 -196975615 + AluSx SINE Alu 1 302 -10 313 286 82 68 chr2 56280968 56281064 -196975519 - MIR3 SINE MIR -53 155 55 21 36 0 0 chr2 56283180 56283208 -196973375 + GC_rich Low_complexity Low_complexity 1 28 0 22 70 0 0 chr2 56283383 56283426 -196973157 + GC_rich Low_complexity Low_complexity 1 43 0 201 154 19 39 chr2 56283469 56283521 -196973062 + (CACCC)n Simple_repeat Simple_repeat 1 51 0 209 157 59 0 chr2 56283747 56283798 -196972785 + (CGG)n Simple_repeat Simple_repeat 2 55 0 212 301 41 81 chr2 56284392 56284515 -196972068 - L2 LINE L2 -211 3061 2944 276 343 103 7 chr2 56284555 56284701 -196971882 - L2 LINE L2 -470 2844 2685 2509 31 7 7 chr2 56284701 56284995 -196971588 + AluSq SINE Alu 1 294 -19 2474 44 0 10 chr2 56284996 56285292 -196971291 + AluY SINE Alu 1 293 -18 520 306 196 37 chr2 56285673 56286012 -196970571 - L2 LINE L2 -1180 2134 1850 1372 157 88 118 chr2 56286012 56286476 -196970107 + LTR7 LTR ERV1 1 450 0 520 306 196 37 chr2 56286476 56286529 -196970054 - L2 LINE L2 -1464 1850 1807 423 0 0 0 chr2 56286529 56286576 -196970007 + (TG)n Simple_repeat Simple_repeat 2 48 0 2086 101 20 29 chr2 56286581 56286887 -196969696 - AluSg SINE Alu -7 303 1 520 306 196 37 chr2 56286887 56287196 -196969387 - L2 LINE L2 -1510 1804 1313 1784 78 0 0 chr2 56287696 56287914 -196968669 + AluSc SINE Alu 79 296 -13 2133 108 14 0 chr2 56288224 56288521 -196968062 + AluY SINE Alu 1 301 -10 1824 171 10 0 chr2 56288887 56289180 -196967403 - AluJo SINE Alu -16 296 1 354 235 162 0 chr2 56289583 56289719 -196966864 - L1MEd LINE L1 -4872 1247 1090 2142 114 7 0 chr2 56289720 56290018 -196966565 - AluY SINE Alu -11 300 1 445 270 80 73 chr2 56290022 56290139 -196966444 - L1MEd LINE L1 -5756 363 248 2278 87 0 7 chr2 56290139 56290425 -196966158 + AluSg SINE Alu 14 297 -13 445 270 80 73 chr2 56290425 56290607 -196965976 - L1MEd LINE L1 -5871 248 62 2360 109 0 0 chr2 56290653 56290955 -196965628 + AluSx SINE Alu 1 302 -10 3916 121 43 47 chr2 56291083 56291277 -196965306 + Tigger3b DNA MER2_type 2 195 -2833 1300 183 3 120 chr2 56291277 56291610 -196964973 + AluSp SINE Alu 1 294 -19 3916 121 43 47 chr2 56291610 56292020 -196964563 + Tigger3b DNA MER2_type 195 605 -2423 2271 111 0 7 chr2 56292020 56292327 -196964256 + AluSc SINE Alu 1 305 -4 3916 121 43 47 chr2 56292327 56292369 -196964214 + Tigger3b DNA MER2_type 605 646 -2382 1936 132 34 0 chr2 56292369 56292665 -196963918 - AluSx SINE Alu -6 306 1 3916 121 43 47 chr2 56292665 56292734 -196963849 + Tigger3b DNA MER2_type 646 716 -515 558 150 0 0 chr2 56292734 56292814 -196963769 + AluJ/FLAM SINE Alu 1 80 -232 2047 107 4 14 chr2 56292962 56293243 -196963340 - AluSx SINE Alu -34 278 1 677 188 31 16 chr2 56293489 56293617 -196962966 - FLAM_C SINE Alu -12 131 2 189 0 0 0 chr2 56294752 56294773 -196961810 + (A)n Simple_repeat Simple_repeat 1 21 0 2026 77 0 21 chr2 56294773 56295059 -196961524 - AluY SINE Alu -31 280 1 485 130 304 0 chr2 56295059 56295151 -196961432 - FLAM_A SINE Alu -10 132 13 492 268 131 20 chr2 56295239 56295437 -196961146 + MIR SINE MIR 3 222 -40 1634 154 46 0 chr2 56295577 56295862 -196960721 + AluJb SINE Alu 1 298 -14 809 200 137 16 chr2 56296201 56296391 -196960192 + MER58A DNA MER1_type 1 213 -11 696 159 0 0 chr2 56296446 56296553 -196960030 - FLAM_A SINE Alu -1 141 35 1750 164 42 30 chr2 56296691 56297026 -196959557 + L1PA16 LINE L1 5808 6146 -20 2416 100 0 0 chr2 56297485 56297794 -196958789 - AluSc SINE Alu 0 309 1 200 307 136 11 chr2 56298051 56298139 -196958444 + MIR3 SINE MIR 3 101 -107 1662 130 3 62 chr2 56298951 56299243 -196957340 - L1PA15 LINE L1 -3 6162 5888 1637 195 40 7 chr2 56299286 56299588 -196956995 - AluJb SINE Alu 0 312 1 2241 121 0 9 chr2 56299719 56300034 -196956549 - AluSx SINE Alu 0 312 1 2236 79 10 0 chr2 56300754 56301046 -196955537 + AluY SINE Alu 1 295 -16 1732 166 7 20 chr2 56301107 56301403 -196955180 - AluJb SINE Alu -20 292 1 21 0 0 0 chr2 56301597 56301618 -196954965 + AT_rich Low_complexity Low_complexity 1 21 0 287 345 67 8 chr2 56302292 56302411 -196954172 + L2 LINE L2 3147 3272 0 327 296 138 25 chr2 56302825 56302912 -196953671 - MIR SINE MIR -13 249 173 714 231 151 35 chr2 56302912 56303224 -196953359 - MER7A DNA MER2_type 0 346 1 327 296 138 25 chr2 56303224 56303332 -196953251 - MIR SINE MIR -89 173 32 911 169 0 0 chr2 56305591 56305733 -196950850 - AluSg/x SINE Alu -34 276 135 1268 160 116 56 chr2 56306321 56306589 -196949994 + AluJo SINE Alu 3 286 -16 1959 147 3 6 chr2 56306682 56306994 -196949589 + AluSx SINE Alu 1 311 -1 3412 75 58 78 chr2 56307014 56307083 -196949500 - L1MA2 LINE L1 0 6304 6235 1700 159 0 70 chr2 56307083 56307410 -196949173 - AluSx SINE Alu -8 304 1 3412 75 58 78 chr2 56307410 56307824 -196948759 - L1MA2 LINE L1 -69 6235 5831 2135 87 6 84 chr2 56307824 56308156 -196948427 - AluSx SINE Alu -6 306 1 3412 75 58 78 chr2 56308156 56308219 -196948364 - L1MA2 LINE L1 -473 5831 5768 813 148 8 0 chr2 56308227 56308349 -196948234 - FLAM_C SINE Alu -18 125 3 2955 80 3 0 chr2 56308355 56308741 -196947842 - L1M1 LINE L1 -523 5781 5395 235 349 84 16 chr2 56309690 56309939 -196946644 + L2 LINE L2 2476 2741 -573 1114 116 0 0 chr2 56310245 56310392 -196946191 - AluSg/x SINE Alu -17 293 147 1821 145 35 0 chr2 56310559 56310679 -196945904 + AluSx SINE Alu 1 115 -197 261 0 0 0 chr2 56310679 56310708 -196945875 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1821 145 35 0 chr2 56310708 56310876 -196945707 + AluSx SINE Alu 115 299 -13 942 101 0 0 chr2 56311644 56311763 -196944820 - FLAM_C SINE Alu -24 119 1 948 163 0 19 chr2 56312433 56312593 -196943990 + AluSg/x SINE Alu 130 286 -24 2173 85 28 11 chr2 56312608 56312891 -196943692 + AluSx SINE Alu 1 288 -24 905 135 0 0 chr2 56313022 56313148 -196943435 + FLAM_C SINE Alu 1 126 -17 216 0 0 0 chr2 56313591 56313615 -196942968 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 667 286 123 17 chr2 56313862 56314314 -196942269 - L1MC4a LINE L1 -216 5905 5462 901 234 90 5 chr2 56314394 56314616 -196941967 - MIR SINE MIR -20 242 2 2127 107 13 3 chr2 56314743 56315041 -196941542 - AluSp SINE Alu -8 305 5 215 175 32 48 chr2 56315112 56315175 -196941408 + GA-rich Low_complexity Low_complexity 2 63 0 594 236 192 5 chr2 56316058 56316266 -196940317 + MIR SINE MIR 2 248 -14 1236 53 20 0 chr2 56316622 56316773 -196939810 - L1PA2 LINE L1 -1 6154 6001 23 33 0 0 chr2 56317221 56317251 -196939332 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr2 56317559 56317589 -196938994 + AT_rich Low_complexity Low_complexity 1 30 0 2497 87 3 0 chr2 56317823 56318134 -196938449 - AluSx SINE Alu 0 312 1 1085 224 47 32 chr2 56318244 56318521 -196938062 - L1ME3 LINE L1 -1 6956 6676 1043 158 0 0 chr2 56318565 56318730 -196937853 - L1MA4A LINE L1 -1 6302 6138 826 172 0 15 chr2 56318816 56318950 -196937633 - FLAM_C SINE Alu -3 140 9 919 168 0 0 chr2 56318951 56319088 -196937495 - AluSc SINE Alu -53 256 120 2274 99 0 10 chr2 56319094 56319397 -196937186 - AluSx SINE Alu -12 300 1 608 217 46 17 chr2 56319398 56319573 -196937010 - L1ME3 LINE L1 -950 5991 5812 * 804 260 134 12 chr2 56319563 56319951 -196936632 - L1ME3 LINE L1 -4899 1524 1501 2288 114 0 0 chr2 56319951 56320259 -196936324 - AluY SINE Alu -3 308 1 804 260 134 12 chr2 56320259 56320380 -196936203 - L1ME3 LINE L1 -4922 1501 1396 559 180 90 41 chr2 56321887 56322009 -196934574 - FLAM_A SINE Alu -3 139 12 2159 198 140 43 chr2 56322078 56322735 -196933848 - MER21B LTR ERV1 -45 818 98 341 293 0 0 chr2 56322803 56322878 -196933705 - MER21B LTR ERV1 -768 95 21 368 314 88 13 chr2 56322884 56323043 -196933540 + MIR SINE MIR 65 235 -27 2026 137 3 3 chr2 56323109 56323401 -196933182 - AluSx SINE Alu -20 292 1 815 120 60 0 chr2 56323697 56323830 -196932753 + FAM SINE Alu 29 169 -16 239 261 34 80 chr2 56324087 56324112 -196932471 + MER5A DNA MER1_type 78 103 -86 2296 102 3 0 chr2 56324112 56324406 -196932177 - AluSg SINE Alu -15 295 1 239 261 34 80 chr2 56324406 56324468 -196932115 + MER5A DNA MER1_type 103 161 -28 1912 152 3 0 chr2 56324702 56325004 -196931579 - AluJo SINE Alu -3 309 7 911 174 0 0 chr2 56325342 56325491 -196931092 - FRAM SINE Alu -22 154 6 382 233 49 3 chr2 56325620 56325780 -196930803 - 7SLRNA srpRNA srpRNA -106 214 6 400 284 200 0 chr2 56325881 56326106 -196930477 + Charlie7 DNA MER1_type 32 301 -2311 2390 86 0 0 chr2 56326184 56326485 -196930098 + AluSx SINE Alu 3 303 -9 1837 121 14 18 chr2 56326627 56326952 -196929631 + AluSx SINE Alu 2 325 0 2112 100 28 0 chr2 56327887 56328177 -196928406 + AluSq SINE Alu 1 298 -15 23 0 0 0 chr2 56329377 56329400 -196927183 + AT_rich Low_complexity Low_complexity 1 23 0 1996 90 8 0 chr2 56330030 56330285 -196926298 + AluSx SINE Alu 44 300 -12 1478 183 14 21 chr2 56330284 56330563 -196926020 - AluJo SINE Alu -35 277 1 * 26 0 0 0 chr2 56332112 56332138 -196924445 + AT_rich Low_complexity Low_complexity 1 26 0 1088 130 6 12 chr2 56332779 56332948 -196923635 - AluSg/x SINE Alu -16 294 127 1624 192 27 10 chr2 56334602 56334894 -196921689 + AluJb SINE Alu 1 297 -15 244 307 139 0 chr2 56335149 56335250 -196921333 + MIR3 SINE MIR 92 206 -2 763 187 0 8 chr2 56335361 56335495 -196921088 - FLAM_A SINE Alu 0 133 1 198 265 44 0 chr2 56335919 56335987 -196920596 - MIR SINE MIR -68 140 70 30 59 0 0 chr2 56336242 56336293 -196920290 + AT_rich Low_complexity Low_complexity 1 51 0 787 178 0 7 chr2 56336330 56336465 -196920118 + AluJo SINE Alu 1 134 -178 609 157 30 4 chr2 56337738 56337969 -196918614 + (TA)n Simple_repeat Simple_repeat 1 237 0 223 312 101 46 chr2 56438065 56438275 -196818308 + L2 LINE L2 3034 3258 -14 183 80 0 0 chr2 56438275 56438300 -196818283 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 2087 125 0 10 chr2 56438673 56438976 -196817607 - AluSq SINE Alu -12 301 2 1013 184 0 0 chr2 56438982 56439161 -196817422 - AluJo SINE Alu 0 312 134 216 0 0 0 chr2 56439161 56439185 -196817398 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1724 57 0 0 chr2 56439185 56439394 -196817189 - AluSg/x SINE Alu -30 282 74 2007 77 0 0 chr2 56439494 56439742 -196816841 - AluY SINE Alu -63 248 1 847 126 0 88 chr2 56439742 56439775 -196816808 - AluJo SINE Alu -167 145 111 1710 133 33 11 chr2 56439775 56440046 -196816537 + AluJb SINE Alu 1 277 -35 847 126 0 88 chr2 56440046 56440171 -196816412 - AluJo SINE Alu -201 111 1 213 328 60 0 chr2 56440660 56440727 -196815856 + MER5A DNA MER1_type 70 140 -49 202 267 67 0 chr2 56441552 56441612 -196814971 - MIR SINE MIR -92 170 107 195 355 64 7 chr2 56441663 56441804 -196814779 - L2 LINE L2 -155 3117 2969 1749 125 61 24 chr2 56442156 56442289 -196814294 + AluJo SINE Alu 1 128 -184 2236 87 0 3 chr2 56442289 56442578 -196814005 + AluSq SINE Alu 1 288 -25 1749 125 61 24 chr2 56442578 56442741 -196813842 + AluJo SINE Alu 128 308 -4 342 209 11 131 chr2 56443137 56443328 -196813255 - MLT1B LTR MaLR -36 354 187 1890 163 0 16 chr2 56443329 56443635 -196812948 - AluJo SINE Alu -2 310 10 1025 142 18 6 chr2 56443651 56443820 -196812763 - AluSc SINE Alu -9 300 130 2197 90 10 10 chr2 56443833 56444143 -196812440 - AluSg SINE Alu 0 310 1 2019 122 3 3 chr2 56444143 56444438 -196812145 - AluSx SINE Alu -16 296 1 21 0 0 0 chr2 56445694 56445715 -196810868 + GC_rich Low_complexity Low_complexity 1 21 0 193 178 19 47 chr2 56446190 56446297 -196810286 + G-rich Low_complexity Low_complexity 6 109 0 247 280 20 0 chr2 56446720 56446820 -196809763 + T-rich Low_complexity Low_complexity 2 103 0 27 49 0 0 chr2 56446870 56446911 -196809672 + AT_rich Low_complexity Low_complexity 1 41 0 2517 58 0 6 chr2 56447555 56447867 -196808716 + AluY SINE Alu 2 311 0 406 215 81 47 chr2 56448229 56448378 -196808205 + MLT1C LTR MaLR 1 154 -313 2314 53 0 0 chr2 56448387 56448711 -196807872 - AluY SINE Alu 0 324 1 996 167 11 6 chr2 56449155 56449329 -196807254 + AluJb SINE Alu 136 310 -2 1630 178 0 59 chr2 56449679 56450000 -196806583 - AluJb SINE Alu -10 302 1 264 282 73 9 chr2 56450583 56450693 -196805890 + MIR SINE MIR 37 153 -55 837 167 19 4 chr2 56450821 56451091 -196805492 + (TGGA)n Simple_repeat Simple_repeat 1 274 0 314 157 0 0 chr2 56451095 56451146 -196805437 + (TGGG)n Simple_repeat Simple_repeat 2 52 0 1104 147 0 0 chr2 56451151 56451676 -196804907 + (TGGA)n Simple_repeat Simple_repeat 1 525 0 827 216 0 0 chr2 56451808 56451956 -196804627 - FRAM SINE Alu -34 142 1 406 215 81 47 chr2 56451964 56452113 -196804470 + MLT1C LTR MaLR 1 154 -313 2129 89 4 0 chr2 56452122 56452445 -196804138 - AluY SINE Alu 0 324 1 554 165 0 11 chr2 56452890 56452981 -196803602 + AluJb SINE Alu 136 225 -87 939 180 4 0 chr2 56453384 56453859 -196802724 + (TGGA)n Simple_repeat Simple_repeat 1 477 0 428 247 44 76 chr2 56454336 56454494 -196802089 + MER3 DNA MER1_type 1 153 -56 2046 106 0 3 chr2 56454494 56454808 -196801775 - AluSx SINE Alu 0 313 1 2068 144 0 3 chr2 56454808 56455120 -196801463 - AluSx SINE Alu -1 311 1 2123 49 0 4 chr2 56455145 56455409 -196801174 + AluY SINE Alu 1 263 -48 1502 168 31 9 chr2 56455530 56455851 -196800732 + THE1C LTR MaLR 7 334 -41 2058 71 61 3 chr2 56455852 56456146 -196800437 + AluY SINE Alu 1 311 0 255 29 0 0 chr2 56456169 56456203 -196800380 + L1PA6 LINE L1 6111 6144 -10 25 31 0 0 chr2 56456203 56456235 -196800348 + AT_rich Low_complexity Low_complexity 1 32 0 321 200 13 27 chr2 56456245 56456320 -196800263 - AluJ/FLAM SINE Alu -227 75 2 1802 120 58 0 chr2 56456496 56456772 -196799811 + AluSp SINE Alu 1 292 -21 198 298 24 36 chr2 56457045 56457129 -196799454 + L2 LINE L2 3221 3303 -10 2304 95 0 0 chr2 56457131 56457437 -196799146 + AluSq SINE Alu 1 306 -7 2367 91 0 0 chr2 56457612 56457921 -196798662 - AluSx SINE Alu -1 311 3 2530 43 3 0 chr2 56457928 56458230 -196798353 - AluY SINE Alu -8 303 1 21 57 0 0 chr2 56458233 56458268 -196798315 + AT_rich Low_complexity Low_complexity 1 35 0 557 168 0 92 chr2 56458290 56458409 -196798174 + FRAM SINE Alu 48 155 -21 1888 110 3 35 chr2 56458418 56458744 -196797839 + AluSx SINE Alu 1 317 0 1836 108 39 11 chr2 56458745 56459024 -196797559 + AluSq SINE Alu 4 290 -23 612 199 301 25 chr2 56459038 56459274 -196797309 - L1MD2 LINE L1 -150 6209 6040 1492 206 0 20 chr2 56459274 56459436 -196797147 - AluJo SINE Alu -17 295 131 270 0 0 0 chr2 56459436 56459466 -196797117 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 2321 42 0 3 chr2 56459466 56459749 -196796834 - AluY SINE Alu -29 282 1 1492 206 0 20 chr2 56459749 56459886 -196796697 - AluJo SINE Alu -179 133 1 2234 95 0 0 chr2 56459888 56460192 -196796391 - AluSg SINE Alu -6 304 1 612 199 301 25 chr2 56460192 56460234 -196796349 - L1MD2 LINE L1 -319 6040 5850 183 280 20 0 chr2 56460310 56460360 -196796223 + MIR SINE MIR 115 165 -97 1900 119 14 10 chr2 56460597 56460890 -196795693 + AluSq SINE Alu 1 294 -19 266 123 27 41 chr2 56460958 56461031 -196795552 + GA-rich Low_complexity Low_complexity 3 74 0 699 215 23 0 chr2 56461555 56461685 -196794898 + AluJo/FLAM SINE Alu 1 133 -169 2209 92 26 0 chr2 56461687 56462014 -196794569 + AluSx SINE Alu 1 335 0 2112 107 0 26 chr2 56462052 56462361 -196794222 - AluSx SINE Alu -11 301 1 2236 115 0 0 chr2 56462931 56463243 -196793340 + AluSx SINE Alu 1 312 0 2244 125 0 0 chr2 56463249 56463560 -196793023 + AluSx SINE Alu 1 311 -1 2243 107 3 0 chr2 56463585 56463894 -196792689 + AluSg SINE Alu 1 310 0 189 0 0 0 chr2 56464226 56464247 -196792336 + (T)n Simple_repeat Simple_repeat 1 21 0 652 244 58 56 chr2 56464322 56464536 -196792047 - MER20 DNA MER1_type -1 218 2 2251 104 0 0 chr2 56464540 56464847 -196791736 - AluSc SINE Alu -2 307 1 2024 60 12 0 chr2 56464877 56465127 -196791456 + AluY SINE Alu 1 253 -58 1799 118 86 0 chr2 56465165 56465445 -196791138 - AluSq SINE Alu -9 304 1 1562 185 14 20 chr2 56465447 56465739 -196790844 - AluJo SINE Alu -11 301 12 232 267 267 30 chr2 56465790 56465925 -196790658 - MIR3 SINE MIR -6 202 36 2149 97 0 39 chr2 56466045 56466163 -196790420 + AluSx SINE Alu 1 122 -190 2386 56 0 13 chr2 56466163 56466468 -196790115 + AluY SINE Alu 1 301 -10 2149 97 0 39 chr2 56466468 56466658 -196789925 + AluSx SINE Alu 122 297 -15 2331 85 3 3 chr2 56466834 56467140 -196789443 - AluSq SINE Alu -7 306 1 1916 124 28 3 chr2 56467371 56467653 -196788930 - AluJb SINE Alu -17 295 7 207 325 26 0 chr2 56468345 56468422 -196788161 - MIR3 SINE MIR -52 156 78 2386 39 0 39 chr2 56468430 56468736 -196787847 - AluY SINE Alu -17 294 1 2199 104 0 0 chr2 56468736 56469033 -196787550 - AluSg SINE Alu -13 297 1 1706 85 135 0 chr2 56469869 56470129 -196786454 + AluSp SINE Alu 1 295 -18 802 215 0 7 chr2 56470129 56470278 -196786305 - AluJb SINE Alu -34 278 131 1251 35 0 0 chr2 56470294 56470438 -196786145 + AluY SINE Alu 1 144 -167 2342 84 3 0 chr2 56470438 56470746 -196785837 + AluSx SINE Alu 1 309 -3 1087 194 14 5 chr2 56470785 56470996 -196785587 - AluJo SINE Alu -94 218 6 671 151 28 0 chr2 56470998 56471104 -196785479 - AluJo SINE Alu -174 138 30 253 280 11 75 chr2 56471231 56471324 -196785259 + L2 LINE L2 3226 3312 -1 189 161 0 0 chr2 56471561 56471592 -196784991 + MIR SINE MIR 221 251 -11 2171 96 0 0 chr2 56471818 56472131 -196784452 - AluSc SINE Alu 0 313 1 1124 149 41 0 chr2 56472142 56472337 -196784246 - AluJb SINE Alu -3 309 107 2533 55 3 0 chr2 56472342 56472652 -196783931 + AluY SINE Alu 1 311 0 2099 108 3 25 chr2 56472660 56472976 -196783607 + AluSx SINE Alu 3 311 -1 426 231 16 65 chr2 56474480 56474666 -196781917 + (CGGG)n Simple_repeat Simple_repeat 4 180 0 * 630 173 0 58 chr2 56474603 56474794 -196781789 + (TGGG)n Simple_repeat Simple_repeat 1 180 0 2052 137 0 0 chr2 56475640 56475940 -196780643 - AluJb SINE Alu -12 300 1 451 247 49 6 chr2 56478238 56478565 -196778018 + (CA)n Simple_repeat Simple_repeat 1 341 0 299 44 22 0 chr2 56478614 56478659 -196777924 + (CA)n Simple_repeat Simple_repeat 2 47 0 22 0 0 0 chr2 56479094 56479116 -196777467 + GC_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr2 56479216 56479252 -196777331 + GC_rich Low_complexity Low_complexity 1 36 0 269 351 70 18 chr2 56480056 56480227 -196776356 - MIR SINE MIR -78 184 5 2092 120 3 31 chr2 56480612 56480929 -196775654 - AluSx SINE Alu -4 308 1 182 337 157 0 chr2 56480972 56481055 -196775528 - L2 LINE L2 -14 3258 3163 379 286 43 7 chr2 56481172 56481312 -196775271 - MIR SINE MIR -96 166 22 835 166 29 17 chr2 56481768 56481943 -196774640 + L1MB5 LINE L1 5998 6174 0 1000 118 0 0 chr2 56481963 56482099 -196774484 + AluSq/x SINE Alu 1 136 -177 2463 54 7 0 chr2 56482101 56482399 -196774184 + AluY SINE Alu 4 303 -8 248 163 18 11 chr2 56482421 56482476 -196774107 - MIR SINE MIR -43 165 113 1846 131 3 26 chr2 56483200 56483506 -196773077 + AluJo SINE Alu 14 312 0 2411 71 0 0 chr2 56483508 56483818 -196772765 + AluY SINE Alu 1 310 -1 226 281 128 56 chr2 56483824 56483877 -196772706 + L2 LINE L2 1999 2047 -1267 2201 113 3 0 chr2 56483877 56484179 -196772404 - AluSp SINE Alu -10 303 1 226 281 128 56 chr2 56484179 56484321 -196772262 + L2 LINE L2 2047 2208 -1106 241 246 16 0 chr2 56484365 56484426 -196772157 - LTR16C LTR ERVL -7 484 423 438 323 56 50 chr2 56484560 56484863 -196771720 + L2 LINE L2 2882 3186 -86 303 199 41 178 chr2 56485044 56485118 -196771465 + L1MC3 LINE L1 7512 7558 -227 2324 97 0 0 chr2 56485118 56485426 -196771157 + AluY SINE Alu 1 308 -3 303 199 41 178 chr2 56485426 56485497 -196771086 + L1MC3 LINE L1 7558 7637 -148 29 28 0 0 chr2 56485547 56485583 -196771000 + AT_rich Low_complexity Low_complexity 1 36 0 1831 170 6 6 chr2 56485583 56485895 -196770688 + AluJb SINE Alu 1 312 0 801 143 0 36 chr2 56485983 56486123 -196770460 + AluJb SINE Alu 1 135 -177 1877 159 0 22 chr2 56486123 56486438 -196770145 + AluJo SINE Alu 1 308 -4 653 271 36 9 chr2 56486578 56486803 -196769780 - MLT1K LTR MaLR -282 306 76 976 129 20 0 chr2 56487185 56487332 -196769251 - AluSq/x SINE Alu -163 150 1 630 231 94 30 chr2 56487333 56487536 -196769047 - L1MA10 LINE L1 -56 6278 6063 2220 100 3 0 chr2 56488476 56488786 -196767797 - AluSx SINE Alu -1 311 1 22 35 0 0 chr2 56489635 56489664 -196766919 + GC_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 56489987 56490009 -196766574 + GC_rich Low_complexity Low_complexity 1 22 0 32 26 0 0 chr2 56490105 56490144 -196766439 + GC_rich Low_complexity Low_complexity 1 39 0 2163 111 3 0 chr2 56490554 56490861 -196765722 - AluSx SINE Alu -4 308 1 341 289 0 21 chr2 56491554 56491651 -196764932 - MIR3 SINE MIR -52 156 62 1961 126 18 0 chr2 56491787 56492073 -196764510 + AluSx SINE Alu 1 291 -21 485 241 62 2 chr2 56492169 56492334 -196764249 - MIR SINE MIR -62 146 5 479 94 0 42 chr2 56493552 56493648 -196762935 + (TTCC)n Simple_repeat Simple_repeat 1 92 0 183 279 82 0 chr2 56493827 56493888 -196762695 - MIR3 SINE MIR -43 165 100 2142 106 0 31 chr2 56493975 56494297 -196762286 - AluSx SINE Alu 0 312 1 211 301 55 0 chr2 56494334 56494407 -196762176 + L2 LINE L2 3235 3311 -2 252 0 0 0 chr2 56494452 56494480 -196762103 + (TGAA)n Simple_repeat Simple_repeat 3 30 0 239 282 128 0 chr2 56494517 56494595 -196761988 + MIR SINE MIR 36 123 -85 241 310 38 19 chr2 56494833 56494991 -196761592 + C-rich Low_complexity Low_complexity 1 161 0 200 307 11 45 chr2 56495469 56495557 -196761026 - MIR SINE MIR 0 262 178 180 244 24 0 chr2 56495753 56495794 -196760789 - MIR SINE MIR -113 149 108 1752 181 0 0 chr2 56497877 56498165 -196758418 - AluJo SINE Alu -15 297 10 2764 81 11 0 chr2 56498226 56498584 -196757999 - L1PA8 LINE L1 -13 6159 5798 184 260 201 19 chr2 56499212 56499366 -196757217 + MIR3 SINE MIR 9 190 -18 190 319 0 0 chr2 56499416 56499463 -196757120 - L2 LINE L2 -3 3310 3264 1515 194 3 25 chr2 56500222 56500541 -196756042 - AluJo SINE Alu 0 312 1 2209 106 6 0 chr2 56500557 56500868 -196755715 - AluSq SINE Alu 0 313 1 839 211 0 57 chr2 56500893 56501055 -196755528 + AluJb SINE Alu 137 307 -5 2177 94 13 7 chr2 56501055 56501364 -196755219 + AluY SINE Alu 1 311 0 2267 105 0 10 chr2 56501365 56501679 -196754904 + AluSx SINE Alu 1 311 -1 2202 107 3 0 chr2 56502040 56502338 -196754245 + AluSp SINE Alu 1 299 -14 388 224 13 20 chr2 56502390 56502542 -196754041 + L2 LINE L2 2817 2967 -346 2202 103 3 3 chr2 56502542 56502842 -196753741 - AluSc SINE Alu -9 300 1 2029 132 0 7 chr2 56502842 56503145 -196753438 - AluSx SINE Alu -11 301 1 6761 55 4 47 chr2 56503177 56504641 -196751942 + SVA Other Other 213 1380 -6 2147 120 3 0 chr2 56504753 56505053 -196751530 - AluSx SINE Alu -7 305 5 259 270 95 48 chr2 56505115 56505241 -196751342 + MIR3 SINE MIR 15 146 -62 237 270 0 0 chr2 56506299 56506388 -196750195 + (CA)n Simple_repeat Simple_repeat 1 89 0 194 203 0 17 chr2 56506500 56506559 -196750024 + (CA)n Simple_repeat Simple_repeat 1 58 0 2188 77 28 0 chr2 56508276 56508561 -196748022 + AluY SINE Alu 1 293 -18 781 197 39 116 chr2 56508731 56508964 -196747619 - MER20 DNA MER1_type 0 219 5 233 250 18 0 chr2 56509076 56509132 -196747451 + MIR SINE MIR 117 173 -89 2047 96 39 0 chr2 56509164 56509446 -196747137 - AluSx SINE Alu -11 301 9 216 0 0 0 chr2 56509527 56509551 -196747032 + (TG)n Simple_repeat Simple_repeat 2 25 0 202 189 0 0 chr2 56509606 56509643 -196746940 - L2 LINE L2 -19 3294 3258 870 153 0 0 chr2 56510689 56510813 -196745770 + FLAM_C SINE Alu 1 124 -9 2078 99 0 40 chr2 56510833 56511135 -196745448 + AluSx SINE Alu 1 290 -22 22 56 0 0 chr2 56512092 56512128 -196744455 + GC_rich Low_complexity Low_complexity 1 36 0 2377 56 0 10 chr2 56513826 56514129 -196742454 + AluY SINE Alu 1 300 -11 2249 118 0 0 chr2 56514379 56514684 -196741899 + AluSx SINE Alu 1 305 -7 200 216 59 0 chr2 56515860 56515911 -196740672 + (GGGTG)n Simple_repeat Simple_repeat 3 56 0 1041 91 0 0 chr2 56516528 56516660 -196739923 + AluY SINE Alu 1 132 -179 2369 49 0 0 chr2 56516664 56516948 -196739635 + AluY SINE Alu 1 284 -27 207 0 0 0 chr2 56516948 56516971 -196739612 + (CAAT)n Simple_repeat Simple_repeat 2 24 0 2040 116 0 14 chr2 56516983 56517298 -196739285 + AluSx SINE Alu 1 311 0 271 122 0 0 chr2 56517323 56517364 -196739219 + AluJ/FLAM SINE Alu 35 75 -227 2379 82 0 0 chr2 56517365 56517669 -196738914 - AluY SINE Alu -6 305 2 1649 147 10 42 chr2 56517671 56517978 -196738605 - AluSx SINE Alu -15 297 1 407 21 0 0 chr2 56517982 56518029 -196738554 - AluSg/x SINE Alu -179 131 85 2061 114 0 20 chr2 56518093 56518390 -196738193 - AluJb SINE Alu -14 298 8 2022 103 31 10 chr2 56518432 56518724 -196737859 - AluSq SINE Alu -15 298 1 1966 117 3 20 chr2 56518755 56519054 -196737529 - AluSx SINE Alu -18 294 1 189 0 0 0 chr2 56519292 56519313 -196737270 + (CCCCCG)n Simple_repeat Simple_repeat 2 22 0 30 45 0 0 chr2 56519424 56519468 -196737115 + GC_rich Low_complexity Low_complexity 1 44 0 261 192 39 0 chr2 56519668 56519720 -196736863 + MIR3 SINE MIR 117 170 -38 955 194 6 0 chr2 56522075 56522240 -196734343 - FRAM SINE Alu 0 166 1 403 104 52 0 chr2 56522243 56522320 -196734263 + CT-rich Low_complexity Low_complexity 4 84 0 984 57 8 0 chr2 56522320 56522442 -196734141 - AluSc SINE Alu -186 123 1 363 340 93 5 chr2 56522443 56522730 -196733853 - HAL1 LINE L1 -1205 1302 880 2271 76 0 33 chr2 56522742 56523044 -196733539 - AluY SINE Alu -19 292 1 1080 53 23 0 chr2 56523044 56523175 -196733408 - AluSq/x SINE Alu -176 136 3 225 113 14 169 chr2 56523176 56523205 -196733378 + L1MB7 LINE L1 6111 6124 -60 2167 99 3 16 chr2 56523205 56523518 -196733065 + AluSx SINE Alu 1 309 -3 225 113 14 169 chr2 56523518 56523559 -196733024 + L1MB7 LINE L1 6124 6170 -14 1618 110 27 104 chr2 56524686 56525014 -196731569 + AluYb8 SINE Alu 1 303 -15 243 241 17 0 chr2 56525017 56525075 -196731508 + FLAM_A SINE Alu 2 60 -72 2044 109 11 0 chr2 56525121 56525405 -196731178 + AluSx SINE Alu 1 287 -25 27 29 0 0 chr2 56525405 56525439 -196731144 + AT_rich Low_complexity Low_complexity 1 34 0 788 243 92 0 chr2 56525445 56525696 -196730887 + MER58 DNA MER1_type 1 274 -2146 360 300 83 22 chr2 56525809 56525958 -196730625 - L2 LINE L2 0 3313 3150 2345 99 0 6 chr2 56525958 56526270 -196730313 + AluSx SINE Alu 1 310 -2 360 300 83 22 chr2 56526270 56526300 -196730283 - L2 LINE L2 -163 3150 3123 1579 156 109 0 chr2 56526344 56526619 -196729964 + AluJo SINE Alu 1 305 -7 252 346 28 0 chr2 56526638 56526745 -196729838 - MER3 DNA MER1_type -99 110 1 1960 123 3 26 chr2 56527550 56527860 -196728723 - AluJb SINE Alu -9 303 1 26 0 0 0 chr2 56533294 56533320 -196723263 + GC_rich Low_complexity Low_complexity 1 26 0 25 0 0 0 chr2 56533406 56533431 -196723152 + GC_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr2 56533678 56533701 -196722882 + GC_rich Low_complexity Low_complexity 1 23 0 246 147 0 53 chr2 56533735 56533810 -196722773 + (CCGGG)n Simple_repeat Simple_repeat 5 75 0 28 61 0 0 chr2 56533852 56533901 -196722682 + GC_rich Low_complexity Low_complexity 1 49 0 38 51 0 0 chr2 56534050 56534109 -196722474 + GC_rich Low_complexity Low_complexity 1 59 0 29 0 0 0 chr2 56536021 56536050 -196720533 + GC_rich Low_complexity Low_complexity 1 29 0 248 267 107 8 chr2 56538172 56538303 -196718280 + MER53 DNA DNA 6 149 -40 2061 127 3 0 chr2 56538327 56538635 -196717948 + AluSx SINE Alu 1 309 -3 910 208 0 0 chr2 56538696 56538869 -196717714 - AluJo SINE Alu -22 290 118 25 31 0 0 chr2 56538885 56538917 -196717666 + AT_rich Low_complexity Low_complexity 1 32 0 2192 110 0 0 chr2 56538922 56539223 -196717360 - AluSq SINE Alu -2 311 11 1188 57 0 0 chr2 56539226 56539367 -196717216 - AluSq/x SINE Alu -171 141 1 31 0 0 0 chr2 56539414 56539445 -196717138 + AT_rich Low_complexity Low_complexity 1 31 0 831 195 20 7 chr2 56539507 56539656 -196716927 - AluJb SINE Alu -28 284 134 2023 107 6 44 chr2 56539656 56539826 -196716757 - AluSp SINE Alu -8 305 151 2064 99 17 3 chr2 56539826 56540120 -196716463 - AluY SINE Alu -13 298 1 2023 107 6 44 chr2 56540120 56540266 -196716317 - AluSp SINE Alu -162 151 1 2393 67 0 3 chr2 56540274 56540571 -196716012 - AluY SINE Alu -15 296 1 2395 88 3 0 chr2 56540578 56540886 -196715697 - AluSp SINE Alu -4 309 1 2442 65 0 0 chr2 56541381 56541689 -196714894 - AluY SINE Alu -3 308 1 1384 107 102 0 chr2 56541697 56541912 -196714671 - AluSx SINE Alu -20 292 56 296 235 30 0 chr2 56542782 56542872 -196713711 + MIR SINE MIR 102 194 -62 258 268 10 20 chr2 56543280 56543394 -196713189 + L2 LINE L2 2866 2978 -294 294 366 8 0 chr2 56543743 56543877 -196712706 + L1MB3 LINE L1 5687 5821 -350 962 128 0 43 chr2 56543885 56544049 -196712534 + AluSg/x SINE Alu 134 290 -22 725 234 62 14 chr2 56544065 56544274 -196712309 + L1MB3 LINE L1 5835 6053 -130 1818 97 128 0 chr2 56544276 56544533 -196712050 + AluSx SINE Alu 1 290 -12 1459 141 114 4 chr2 56544546 56544809 -196711774 - AluJo SINE Alu -20 292 1 874 192 0 0 chr2 56545562 56545708 -196710875 - FRAM SINE Alu -30 146 1 198 310 52 0 chr2 56545787 56545845 -196710738 - L2 LINE L2 0 3313 3253 25 65 0 0 chr2 56546203 56546249 -196710334 + GC_rich Low_complexity Low_complexity 1 46 0 223 333 13 27 chr2 56547221 56547371 -196709212 + C-rich Low_complexity Low_complexity 2 149 0 1255 107 0 158 chr2 56548317 56548393 -196708190 + AluJo SINE Alu 81 167 -145 2534 48 0 13 chr2 56548393 56548706 -196707877 + AluY SINE Alu 1 309 -2 1255 107 0 158 chr2 56548706 56548901 -196707682 + AluJo SINE Alu 167 309 -3 188 348 56 0 chr2 56549048 56549137 -196707446 - MIR SINE MIR -89 173 80 301 240 108 23 chr2 56552145 56552274 -196704309 + L2 LINE L2 2632 2771 -543 203 269 218 45 chr2 56552318 56552474 -196704109 + L2 LINE L2 2912 3094 -178 311 315 18 9 chr2 56552554 56552665 -196703918 - MIR3 SINE MIR -13 195 84 28 71 0 0 chr2 56553227 56553283 -196703300 + GC_rich Low_complexity Low_complexity 1 56 0 254 164 30 45 chr2 56553734 56553801 -196702782 + (TCTCTG)n Simple_repeat Simple_repeat 1 66 0 255 204 37 0 chr2 56554050 56554104 -196702479 + MIR SINE MIR 94 149 -59 2527 36 10 7 chr2 56554387 56554696 -196701887 - AluY SINE Alu -1 310 1 1749 112 4 0 chr2 56554696 56554946 -196701637 - AluSg SINE Alu -12 298 48 265 318 84 13 chr2 56555115 56555269 -196701314 + MIR3 SINE MIR 3 167 -41 220 319 44 11 chr2 56555343 56555434 -196701149 - MIR3 SINE MIR -29 179 86 23 0 0 0 chr2 56556818 56556841 -196699742 + GC_rich Low_complexity Low_complexity 1 23 0 30 45 0 0 chr2 56556975 56557019 -196699564 + GC_rich Low_complexity Low_complexity 1 44 0 283 237 237 0 chr2 56557588 56557681 -196698902 - L2 LINE L2 -3 3310 3196 2190 94 16 3 chr2 56558472 56558779 -196697804 + AluSx SINE Alu 1 311 -1 2463 45 0 13 chr2 56559366 56559674 -196696909 - AluY SINE Alu -7 304 1 287 40 80 0 chr2 56559862 56559912 -196696671 - AluY SINE Alu 0 302 249 1962 105 0 0 chr2 56559914 56560180 -196696403 + AluSx SINE Alu 32 297 -15 1338 202 83 50 chr2 56560363 56560759 -196695824 - LTR2 LTR ERV1 0 449 41 1781 115 84 24 chr2 56561300 56561587 -196694996 - AluSq SINE Alu -9 304 1 626 262 98 6 chr2 56561600 56561764 -196694819 + AluJo SINE Alu 123 301 -11 828 153 8 0 chr2 56563569 56563700 -196692883 + AluJo SINE Alu 5 136 -176 2018 115 13 0 chr2 56563701 56564006 -196692577 + AluSx SINE Alu 1 309 -3 202 187 0 80 chr2 56564288 56564363 -196692220 + C-rich Low_complexity Low_complexity 4 72 0 189 326 23 0 chr2 56565047 56565142 -196691441 + MIR SINE MIR 83 137 -71 * 203 152 0 0 chr2 56565123 56565156 -196691427 - L2 LINE L2 -10 3303 3271 859 162 54 73 chr2 56565297 56565501 -196691082 + AluJb SINE Alu 92 291 -21 2288 73 3 17 chr2 56565596 56565897 -196690686 - AluSq SINE Alu -16 297 1 2176 84 47 3 chr2 56565973 56566272 -196690311 + AluSx SINE Alu 1 312 0 2584 49 0 0 chr2 56566884 56567191 -196689392 - AluSp SINE Alu -6 307 1 439 135 151 4 chr2 56567221 56567327 -196689256 + MLT1D LTR MaLR 8 130 -375 23 0 0 0 chr2 56568407 56568430 -196688153 + GC_rich Low_complexity Low_complexity 1 23 0 1657 107 4 0 chr2 56571595 56571829 -196684754 + AluSq SINE Alu 65 299 -14 2377 70 0 16 chr2 56571833 56572147 -196684436 + AluY SINE Alu 3 311 0 2419 63 0 3 chr2 56572239 56572540 -196684043 + AluY SINE Alu 1 300 -11 201 140 53 35 chr2 56577002 56577059 -196679524 + (CCCCAG)n Simple_repeat Simple_repeat 3 60 0 240 111 0 0 chr2 56578881 56578917 -196677666 + (GGA)n Simple_repeat Simple_repeat 3 38 0 282 160 0 0 chr2 56580358 56580408 -196676175 + A-rich Low_complexity Low_complexity 1 50 0 311 360 89 21 chr2 56583541 56583777 -196672806 + L1MC4 LINE L1 7611 7862 -180 25 0 0 0 chr2 56584647 56584672 -196671911 + GC_rich Low_complexity Low_complexity 1 25 0 333 0 0 0 chr2 56587832 56587869 -196668714 + (CA)n Simple_repeat Simple_repeat 2 38 0 941 148 139 1 chr2 56588160 56588406 -196668177 + AluJ SINE Alu 2 311 -1 37 52 0 0 chr2 56588411 56588469 -196668114 + AT_rich Low_complexity Low_complexity 1 58 0 2107 71 32 4 chr2 56588478 56588758 -196667825 - AluSc SINE Alu -21 288 1 356 244 58 113 chr2 56588760 56588909 -196667674 + L1MC4 LINE L1 7770 7926 -116 1976 111 0 7 chr2 56588909 56589188 -196667395 + AluSx SINE Alu 5 281 -31 387 0 0 0 chr2 56589190 56589233 -196667350 + (CA)n Simple_repeat Simple_repeat 2 44 0 356 244 58 113 chr2 56589233 56589355 -196667228 + L1MC4 LINE L1 7927 8029 -13 538 100 0 11 chr2 56589478 56589568 -196667015 - AluS SINE Alu -224 89 1 195 370 59 8 chr2 56591413 56591532 -196665051 + MIR3 SINE MIR 30 154 -54 432 248 60 8 chr2 56591825 56591942 -196664641 + MER20 DNA MER1_type 29 151 -68 21 0 0 0 chr2 56595142 56595163 -196661420 + GC_rich Low_complexity Low_complexity 1 21 0 32 75 0 0 chr2 56595324 56595391 -196661192 + GC_rich Low_complexity Low_complexity 1 67 0 387 0 0 0 chr2 56595560 56595603 -196660980 + (CGG)n Simple_repeat Simple_repeat 1 43 0 31 58 0 0 chr2 56595631 56595683 -196660900 + GC_rich Low_complexity Low_complexity 1 52 0 199 100 80 0 chr2 56595890 56595940 -196660643 + (CGTG)n Simple_repeat Simple_repeat 3 56 0 350 277 50 0 chr2 56596125 56596226 -196660357 - MIR SINE MIR -114 148 43 915 214 28 23 chr2 56596332 56596547 -196660036 + MER20 DNA MER1_type 1 216 -3 1878 106 24 27 chr2 56596701 56596994 -196659589 + AluSx SINE Alu 1 292 -20 2251 104 0 0 chr2 56596995 56597302 -196659281 + AluY SINE Alu 1 307 -4 969 129 0 0 chr2 56597326 56597466 -196659117 - FRAM SINE Alu -12 164 25 1788 151 20 0 chr2 56597488 56597611 -196658972 + AluJo SINE Alu 1 120 -192 198 0 0 0 chr2 56597611 56597633 -196658950 + (TAA)n Simple_repeat Simple_repeat 2 23 0 1788 151 20 0 chr2 56597633 56597801 -196658782 + AluJo SINE Alu 120 298 -14 875 145 0 0 chr2 56597802 56597933 -196658650 + AluSx SINE Alu 3 133 -179 22 0 0 0 chr2 56598064 56598086 -196658497 + AT_rich Low_complexity Low_complexity 1 22 0 2346 81 0 0 chr2 56598088 56598386 -196658197 + AluSx SINE Alu 1 298 -14 1202 125 0 0 chr2 56598386 56598562 -196658021 + AluSx SINE Alu 137 312 0 1649 151 21 66 chr2 56598742 56598793 -196657790 - L1MB3 LINE L1 -1 6182 6130 2283 75 23 0 chr2 56598793 56599098 -196657485 - AluSp SINE Alu -1 312 1 1649 151 21 66 chr2 56599098 56599378 -196657205 - L1MB3 LINE L1 -53 6130 5866 1515 61 80 0 chr2 56599378 56599591 -196656992 - AluSq SINE Alu -83 230 1 676 208 8 0 chr2 56599609 56599734 -196656849 - FLAM_C SINE Alu -12 131 6 1990 104 0 63 chr2 56599900 56600218 -196656365 + AluSg SINE Alu 5 302 -8 302 208 198 10 chr2 56600486 56600587 -196655996 + MIR SINE MIR 41 160 -102 261 0 0 0 chr2 56600608 56600637 -196655946 + (CAGG)n Simple_repeat Simple_repeat 3 31 0 233 171 0 0 chr2 56601015 56601056 -196655527 + MIR SINE MIR 104 144 -64 256 38 208 0 chr2 56601061 56601114 -196655469 + MER41A LTR ERV1 400 463 -91 213 39 0 0 chr2 56601117 56601143 -196655440 + (GGAA)n Simple_repeat Simple_repeat 3 28 0 240 268 10 41 chr2 56601143 56601168 -196655415 + MIR SINE MIR 138 162 -100 1001 76 0 15 chr2 56601168 56601299 -196655284 + FLAM_C SINE Alu 4 132 -1 240 268 10 41 chr2 56601299 56601370 -196655213 + MIR SINE MIR 162 231 -31 22 35 0 0 chr2 56601795 56601824 -196654759 + GC_rich Low_complexity Low_complexity 1 29 0 1719 148 0 43 chr2 56604480 56604816 -196651767 + AluJo SINE Alu 2 312 0 2126 132 0 0 chr2 56604825 56605129 -196651454 + AluSx SINE Alu 1 304 -8 180 0 0 0 chr2 56607714 56607734 -196648849 + (CGG)n Simple_repeat Simple_repeat 1 20 0 362 254 7 43 chr2 56609301 56609439 -196647144 + MER53 DNA DNA 26 158 -31 1176 245 92 0 chr2 56610541 56610868 -196645715 + L1MB7 LINE L1 5778 6134 -50 990 197 25 5 chr2 56610869 56611072 -196645511 + AluJo SINE Alu 96 302 -10 2148 115 0 0 chr2 56611076 56611372 -196645211 + AluSg SINE Alu 1 296 -14 2351 82 13 3 chr2 56611440 56611745 -196644838 + AluSx SINE Alu 1 308 -4 291 270 0 50 chr2 56612535 56612635 -196643948 - Charlie5 DNA MER1_type -85 2527 2433 2353 49 29 19 chr2 56613023 56613331 -196643252 + AluY SINE Alu 1 311 0 459 274 0 0 chr2 56613878 56614053 -196642530 + (TG)n Simple_repeat Simple_repeat 1 175 0 266 319 11 11 chr2 56614056 56614150 -196642433 + (CGTG)n Simple_repeat Simple_repeat 4 97 0 215 241 12 0 chr2 56614153 56614236 -196642347 + (TG)n Simple_repeat Simple_repeat 1 84 0 193 324 48 19 chr2 56615721 56615826 -196640757 + L2 LINE L2 2921 3028 -244 1510 159 53 58 chr2 56616323 56616428 -196640155 + MLT1B LTR MaLR 8 112 -278 2223 105 0 0 chr2 56616428 56616723 -196639860 + AluSx SINE Alu 3 297 -15 1510 159 53 58 chr2 56616723 56616976 -196639607 + MLT1B LTR MaLR 112 364 -26 2143 88 3 3 chr2 56617377 56617686 -196638897 - AluSp SINE Alu 0 309 1 2264 81 7 0 chr2 56617688 56617984 -196638599 - AluSp SINE Alu -9 304 7 1325 246 42 57 chr2 56617990 56618119 -196638464 + Charlie4a DNA MER1_type 1 131 -1830 1555 172 41 14 chr2 56618119 56618410 -196638173 + AluJb SINE Alu 1 299 -13 1325 246 42 57 chr2 56618410 56618785 -196637798 + Charlie4a DNA MER1_type 131 497 -11 689 0 0 0 chr2 56619585 56619660 -196636923 - tRNA-Asn-AAC tRNA tRNA -2 75 1 686 0 0 0 chr2 56619788 56619861 -196636722 + tRNA-Phe-TTC tRNA tRNA 1 73 -3 1737 89 171 8 chr2 56620280 56620538 -196636045 + AluSg SINE Alu 1 300 0 200 292 0 15 chr2 56620644 56620709 -196635874 - L2 LINE L2 -51 3221 3158 850 150 0 0 chr2 56620722 56620849 -196635734 + FLAM_C SINE Alu 1 127 -16 2052 117 23 0 chr2 56620960 56621260 -196635323 - AluSx SINE Alu -5 307 1 656 265 167 15 chr2 56621267 56621603 -196634980 - L1MC3 LINE L1 -29 7756 7370 2199 114 0 0 chr2 56621864 56622162 -196634421 - AluSx SINE Alu -14 298 1 399 263 115 6 chr2 56622278 56622434 -196634149 + MLT1B LTR MaLR 363 535 -32 1473 164 94 0 chr2 56622741 56622998 -196633585 + AluJb SINE Alu 1 287 -25 246 32 0 0 chr2 56622998 56623029 -196633554 + (CCAA)n Simple_repeat Simple_repeat 2 32 0 1473 164 94 0 chr2 56623029 56623046 -196633537 + AluJb SINE Alu 287 301 -11 558 188 39 47 chr2 56624191 56624319 -196632264 - AluJb SINE Alu -33 279 153 2029 98 25 0 chr2 56624345 56624631 -196631952 - AluSx SINE Alu -19 293 1 462 83 0 0 chr2 56626771 56626831 -196629752 + Alu SINE Alu 3 62 -249 1242 175 0 44 chr2 56726831 56727059 -196529524 + AluJo SINE Alu 75 292 -20 337 81 16 0 chr2 56727068 56727130 -196529453 + Tigger3(Golem) DNA MER2_type 2510 2572 -457 837 160 8 0 chr2 56727134 56727265 -196529318 + AluJo SINE Alu 3 134 -178 1973 112 66 54 chr2 56727265 56727449 -196529134 + Tigger3(Golem) DNA MER2_type 2559 2750 -278 1723 180 3 3 chr2 56727449 56727743 -196528840 - AluJb SINE Alu -13 299 6 1973 112 66 54 chr2 56727743 56727904 -196528679 + Tigger3(Golem) DNA MER2_type 2750 2908 -120 3361 96 181 13 chr2 56727904 56728447 -196528136 - MER51A LTR ERV1 0 634 1 910 167 20 7 chr2 56728447 56728591 -196527992 + Tigger3(Golem) DNA MER2_type 2878 3023 -6 21 36 0 0 chr2 56728591 56728619 -196527964 + AT_rich Low_complexity Low_complexity 1 28 0 324 270 169 20 chr2 56729078 56729226 -196527357 - L2 LINE L2 0 3272 3103 414 0 0 0 chr2 56729525 56729571 -196527012 + (TG)n Simple_repeat Simple_repeat 1 46 0 2085 147 0 7 chr2 56729918 56730218 -196526365 + AluJb SINE Alu 1 298 -14 231 36 0 0 chr2 56730764 56730792 -196525791 + (CAT)n Simple_repeat Simple_repeat 3 30 0 1952 131 4 0 chr2 56730992 56731267 -196525316 + AluSq SINE Alu 1 276 -37 218 143 54 18 chr2 56731302 56731358 -196525225 + (TA)n Simple_repeat Simple_repeat 1 58 0 276 305 168 32 chr2 56731363 56731459 -196525124 + L1M4 LINE L1 3769 3851 -2295 225 65 0 0 chr2 56731459 56731490 -196525093 + (CAAAA)n Simple_repeat Simple_repeat 1 31 0 276 305 168 32 chr2 56731490 56731678 -196524905 + L1M4 LINE L1 3851 4092 -2054 604 192 84 48 chr2 56731692 56731756 -196524827 - MLT1I LTR MaLR -12 397 337 2300 104 7 0 chr2 56731756 56732063 -196524520 - AluY SINE Alu -2 309 1 604 192 84 48 chr2 56732063 56732165 -196524418 - MLT1I LTR MaLR -72 337 225 1764 222 28 70 chr2 56732166 56732340 -196524243 + L1ME3A LINE L1 5649 5829 -341 2214 126 17 111 chr2 56732340 56732556 -196524027 + MSTB1 LTR MaLR 1 236 -196 1885 136 34 3 chr2 56732556 56732850 -196523733 + AluSx SINE Alu 7 309 -3 2214 126 17 111 chr2 56732850 56733039 -196523544 + MSTB1 LTR MaLR 236 441 9 2199 101 31 0 chr2 56733039 56733326 -196523257 - AluSx SINE Alu -16 296 1 2132 125 3 3 chr2 56733326 56733621 -196522962 - AluSx SINE Alu -17 295 1 2214 126 17 111 chr2 56733621 56733690 -196522893 + MSTB1 LTR MaLR 358 432 0 1764 222 28 70 chr2 56733690 56734060 -196522523 + L1ME3A LINE L1 5829 6170 0 2075 165 42 91 chr2 56734139 56734783 -196521800 - L1MC/D LINE L1 -547 5695 5105 706 177 0 32 chr2 56734783 56734907 -196521676 + FLAM_A SINE Alu 4 123 -10 2075 165 42 91 chr2 56734907 56735077 -196521506 - L1MC/D LINE L1 -1137 5105 4928 1788 153 0 75 chr2 56735089 56735422 -196521161 - AluJb SINE Alu -4 308 1 1972 118 3 11 chr2 56735433 56735744 -196520839 - AluSx SINE Alu 0 309 1 574 159 257 0 chr2 56735972 56736085 -196520498 - FLAM_C SINE Alu 0 143 2 287 254 0 0 chr2 56736199 56736266 -196520317 + LTR67 LTR ERVL 3 69 -488 2244 129 3 0 chr2 56736664 56736974 -196519609 - AluSx SINE Alu 0 312 2 2246 108 0 9 chr2 56737063 56737379 -196519204 + AluSq SINE Alu 1 313 0 347 141 0 152 chr2 56737429 56737482 -196519101 - MER5A DNA MER1_type -70 119 86 2484 72 0 0 chr2 56737482 56737788 -196518795 - AluY SINE Alu -1 310 5 347 141 0 152 chr2 56737788 56737833 -196518750 - MER5A DNA MER1_type -103 86 36 1006 197 27 4 chr2 56737877 56738086 -196518497 - L1MA5 LINE L1 -350 5814 5623 2278 112 7 0 chr2 56738098 56738401 -196518182 - AluSp SINE Alu -8 305 1 841 230 6 0 chr2 56738487 56738661 -196517922 - FAM SINE Alu 0 175 1 819 125 32 14 chr2 56738714 56738931 -196517652 + CT-rich Low_complexity Low_complexity 1 221 0 674 328 8 8 chr2 56738998 56739245 -196517338 - L2 LINE L2 -541 2773 2527 2281 114 0 0 chr2 56739245 56739544 -196517039 + AluSx SINE Alu 1 299 -13 1865 136 0 15 chr2 56739616 56739888 -196516695 + AluSx SINE Alu 1 268 -44 1834 136 70 0 chr2 56740122 56740409 -196516174 + AluSx SINE Alu 1 307 -5 1997 102 12 74 chr2 56740600 56740745 -196515838 + AluSc SINE Alu 1 117 -192 2557 64 0 6 chr2 56740745 56741058 -196515525 + AluY SINE Alu 1 311 0 1997 102 12 74 chr2 56741058 56741236 -196515347 + AluSc SINE Alu 117 304 -5 640 132 0 0 chr2 56742160 56742307 -196514276 - AluSx SINE Alu 0 337 191 1099 113 0 0 chr2 56742308 56742449 -196514134 - AluSx SINE Alu -171 141 1 2032 122 0 23 chr2 56742547 56742850 -196513733 + AluSq SINE Alu 1 296 -17 899 302 31 59 chr2 56742942 56743419 -196513164 - LTR16B LTR ERVL 0 464 1 201 122 49 0 chr2 56743896 56743937 -196512646 + (TATAG)n Simple_repeat Simple_repeat 3 45 0 2175 125 0 0 chr2 56744014 56744302 -196512281 - AluSx SINE Alu -24 288 1 250 373 55 13 chr2 56744854 56745090 -196511493 - L2 LINE L2 -1383 1931 1686 360 306 104 31 chr2 56745154 56745229 -196511354 - MLT1I LTR MaLR -7 402 334 1686 160 41 7 chr2 56745229 56745523 -196511060 + AluJo SINE Alu 1 304 -8 360 306 104 31 chr2 56745523 56745762 -196510821 - MLT1I LTR MaLR -75 334 68 24 103 0 0 chr2 56746749 56746836 -196509747 + AT_rich Low_complexity Low_complexity 1 87 0 810 296 39 53 chr2 56747201 56747556 -196509027 - MLT1I LTR MaLR 0 409 60 1207 215 16 58 chr2 56747769 56748081 -196508502 + AluJo SINE Alu 1 299 -13 2147 136 0 0 chr2 56748095 56748390 -196508193 - AluSq SINE Alu -18 295 1 282 241 58 23 chr2 56748391 56748478 -196508105 - MER5A DNA MER1_type -50 139 50 5948 148 5 55 chr2 56748530 56749039 -196507544 - L1MC1 LINE L1 -1 6332 5799 2099 119 20 23 chr2 56749039 56749341 -196507242 - AluSg SINE Alu -9 301 1 183 42 0 0 chr2 56749341 56749365 -196507218 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 2269 75 14 0 chr2 56749365 56749644 -196506939 - AluSp SINE Alu -30 283 1 2004 143 3 3 chr2 56749644 56749944 -196506639 - AluSx SINE Alu -12 300 1 2312 88 0 0 chr2 56749952 56750256 -196506327 - AluSp SINE Alu 0 304 1 5948 148 5 55 chr2 56750256 56750668 -196505915 - L1MC1 LINE L1 -538 5795 5364 2215 130 0 9 chr2 56750668 56750983 -196505600 - AluSx SINE Alu 0 312 1 5948 148 5 55 chr2 56750983 56751101 -196505482 - L1MC1 LINE L1 -969 5364 5337 2463 79 3 3 chr2 56751101 56751406 -196505177 - AluY SINE Alu -6 305 1 5948 148 5 55 chr2 56751406 56751471 -196505112 - L1MC1 LINE L1 -996 5337 5270 1042 88 0 0 chr2 56751484 56751621 -196504962 + AluSg/x SINE Alu 174 310 0 1954 221 105 61 chr2 56751629 56752039 -196504544 - L1MC1 LINE L1 -864 5282 4891 2109 128 3 0 chr2 56752039 56752335 -196504248 - AluSx SINE Alu -15 297 1 1954 221 105 61 chr2 56752335 56752674 -196503909 - L1MC1 LINE L1 -1255 4891 4500 1430 185 10 60 chr2 56752697 56752852 -196503731 - AluJo SINE Alu -19 283 149 2398 72 3 0 chr2 56752852 56753143 -196503440 - AluSq SINE Alu -21 292 1 1430 185 10 60 chr2 56753143 56753285 -196503298 - AluJo SINE Alu -153 149 1 609 197 8 0 chr2 56753319 56753436 -196503147 - AluJb SINE Alu -1 311 194 310 196 0 0 chr2 56753443 56753494 -196503089 - LTR8 LTR ERV1 -390 337 287 2297 101 0 43 chr2 56753539 56753865 -196502718 + AluSx SINE Alu 1 312 0 998 148 69 152 chr2 56753893 56753946 -196502637 - LTR8 LTR ERV1 -461 266 210 2365 94 0 3 chr2 56753946 56754244 -196502339 - AluSc SINE Alu -7 302 6 998 148 69 152 chr2 56754244 56754280 -196502303 - LTR8 LTR ERV1 -517 210 173 2139 137 3 0 chr2 56754280 56754587 -196501996 + AluSx SINE Alu 1 308 -4 998 148 69 152 chr2 56754587 56754786 -196501797 - LTR8 LTR ERV1 -554 173 1 751 176 0 65 chr2 56755282 56755435 -196501148 - AluJb SINE Alu -103 209 67 183 271 0 118 chr2 56755458 56755543 -196501040 - L2 LINE L2 -1856 1458 1384 2383 95 0 0 chr2 56755567 56755863 -196500720 + AluSx SINE Alu 1 296 -16 1891 138 25 11 chr2 56755973 56756100 -196500483 + AluSx SINE Alu 1 125 -187 189 0 0 0 chr2 56756100 56756121 -196500462 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 1891 138 25 11 chr2 56756121 56756276 -196500307 + AluSx SINE Alu 125 287 -25 393 325 18 0 chr2 56756571 56756685 -196499898 - MIR SINE MIR -131 131 16 2371 104 0 0 chr2 56756898 56757195 -196499388 + AluSq SINE Alu 1 297 -16 700 112 0 0 chr2 56757203 56757301 -196499282 + L1MA3 LINE L1 6203 6300 -5 327 104 0 0 chr2 56757414 56757462 -196499121 + (T)n Simple_repeat Simple_repeat 1 48 0 1339 139 0 0 chr2 56757478 56757665 -196498918 - AluSx SINE Alu -125 187 1 2180 131 0 0 chr2 56758650 56758948 -196497635 + AluSx SINE Alu 1 298 -14 1243 152 13 48 chr2 56758978 56759208 -196497375 + AluJo SINE Alu 59 280 -32 189 0 0 0 chr2 56759208 56759229 -196497354 + (CAAT)n Simple_repeat Simple_repeat 4 24 0 964 239 91 42 chr2 56759319 56759860 -196496723 + L2 LINE L2 2539 3096 -217 549 0 0 0 chr2 56759952 56760013 -196496570 + (TG)n Simple_repeat Simple_repeat 2 62 0 2073 117 7 0 chr2 56760013 56760296 -196496287 - AluSx SINE Alu -27 285 1 201 256 0 0 chr2 56760412 56760451 -196496132 + polypurine Low_complexity Low_complexity 3 41 0 2148 125 0 10 chr2 56760572 56760877 -196495706 + AluSq SINE Alu 1 302 -11 2135 116 16 13 chr2 56761006 56761317 -196495266 - AluSx SINE Alu 0 312 1 28 29 0 0 chr2 56761403 56761438 -196495145 + AT_rich Low_complexity Low_complexity 1 35 0 822 247 0 0 chr2 56761446 56761620 -196494963 - AluJo SINE Alu -2 310 137 195 200 13 53 chr2 56761706 56761781 -196494802 + MER5A DNA MER1_type 4 75 -114 1348 150 6 121 chr2 56761782 56761928 -196494655 + AluY SINE Alu 2 95 -216 1797 109 16 4 chr2 56761928 56762176 -196494407 + AluSp SINE Alu 4 254 -59 1348 150 6 121 chr2 56762176 56762342 -196494241 + AluY SINE Alu 95 278 -33 387 0 0 0 chr2 56762342 56762385 -196494198 + (CA)n Simple_repeat Simple_repeat 1 43 0 286 215 258 11 chr2 56762386 56762479 -196494104 + MER5A DNA MER1_type 67 182 -7 699 200 8 8 chr2 56762531 56762661 -196493922 - AluJo SINE Alu -182 130 1 21 0 0 0 chr2 56763050 56763071 -196493512 + AT_rich Low_complexity Low_complexity 1 21 0 917 208 68 114 chr2 56763296 56763422 -196493161 - MSTD LTR MaLR 0 396 266 2566 53 0 0 chr2 56763422 56763721 -196492862 - AluY SINE Alu -12 299 1 917 208 68 114 chr2 56763721 56763955 -196492628 - MSTD LTR MaLR -130 266 55 2041 125 54 0 chr2 56763955 56764251 -196492332 - AluSx SINE Alu 0 312 1 917 208 68 114 chr2 56764251 56764302 -196492281 - MSTD LTR MaLR -341 55 3 726 183 0 0 chr2 56764570 56764696 -196491887 - FLAM_C SINE Alu -7 126 1 826 186 90 23 chr2 56764868 56765045 -196491538 - MER5A DNA MER1_type 0 189 1 760 197 0 0 chr2 56765228 56765355 -196491228 + FLAM_C SINE Alu 2 128 -5 2080 133 10 0 chr2 56765448 56765741 -196490842 - AluSx SINE Alu -16 296 1 26 0 0 0 chr2 56765741 56765767 -196490816 + AT_rich Low_complexity Low_complexity 1 26 0 1643 197 0 17 chr2 56765768 56766068 -196490515 - AluJo SINE Alu -17 295 1 737 156 0 16 chr2 56766068 56766190 -196490393 - AluJ SINE Alu -9 303 184 626 189 9 0 chr2 56766190 56766296 -196490287 - AluJ SINE Alu -204 108 2 2262 106 0 0 chr2 56766306 56766616 -196489967 - AluSx SINE Alu 0 310 1 2125 120 23 0 chr2 56766634 56766933 -196489650 - AluSq SINE Alu -7 306 1 293 262 26 89 chr2 56767173 56767226 -196489357 - MARNA DNA Mariner -101 485 430 907 251 37 0 chr2 56767226 56767441 -196489142 + MER58A DNA MER1_type 2 224 0 293 262 26 89 chr2 56767441 56767578 -196489005 - MARNA DNA Mariner -156 430 307 3396 134 24 6 chr2 56767610 56768147 -196488436 - LTR10A LTR ERV1 -62 547 1 388 230 75 50 chr2 56768192 56768353 -196488230 - MARNA DNA Mariner -294 292 128 372 229 95 0 chr2 56768747 56768852 -196487731 - L1MC4 LINE L1 0 8042 7928 293 153 0 17 chr2 56768853 56768912 -196487671 + CT-rich Low_complexity Low_complexity 3 60 0 256 158 0 0 chr2 56769019 56769082 -196487501 - Alu SINE Alu 0 306 244 1637 182 14 14 chr2 56769082 56769378 -196487205 - AluJo SINE Alu -16 296 1 235 196 0 20 chr2 56769390 56769441 -196487142 + MER34B LTR ERV1 43 92 -473 * 1021 205 75 49 chr2 56769422 56769817 -196486766 + MER39 LTR ERV1 279 542 0 475 211 28 2 chr2 56769911 56770024 -196486559 - L1MC/D LINE L1 -492 5674 5574 606 175 10 0 chr2 56770026 56770129 -196486454 - FLAM_A SINE Alu -17 125 22 586 274 61 19 chr2 56770134 56770412 -196486171 - L1MC/D LINE L1 -586 5578 5293 * 9311 152 26 16 chr2 56770407 56770788 -196485795 + L1PB1 LINE L1 3403 3779 -2372 1866 146 35 7 chr2 56770788 56771075 -196485508 + AluSx SINE Alu 1 295 -17 9311 152 26 16 chr2 56771075 56771691 -196484892 + L1PB1 LINE L1 3779 4388 -1763 180 0 0 0 chr2 56771691 56771711 -196484872 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 9311 152 26 16 chr2 56771711 56772510 -196484073 + L1PB1 LINE L1 4388 5178 -973 1940 120 0 66 chr2 56772510 56772827 -196483756 + AluSx SINE Alu 1 296 -16 9311 152 26 16 chr2 56772827 56773744 -196482839 + L1PB1 LINE L1 5178 6134 -17 529 151 0 0 chr2 56773741 56773827 -196482756 - L1MC3 LINE L1 -27 7758 7673 * 1262 208 127 69 chr2 56773833 56774366 -196482217 + MER39 LTR ERV1 1 542 0 2552 152 10 55 chr2 56774369 56774526 -196482057 - L1MC3 LINE L1 -125 7660 7497 2326 109 0 10 chr2 56774526 56774839 -196481744 - AluSx SINE Alu -2 310 1 2552 152 10 55 chr2 56774839 56775022 -196481561 - L1MC3 LINE L1 -288 7497 7346 2150 211 68 45 chr2 56775022 56775578 -196481005 + LTR48B LTR ERV1 1 575 -69 1473 207 7 27 chr2 56775578 56775878 -196480705 + AluJb SINE Alu 6 299 -13 2150 211 68 45 chr2 56775878 56775950 -196480633 + LTR48B LTR ERV1 575 644 0 2552 152 10 55 chr2 56775950 56776096 -196480487 - L1MC3 LINE L1 -439 7346 7195 354 194 0 0 chr2 56776107 56776179 -196480404 + (TA)n Simple_repeat Simple_repeat 2 73 0 859 304 64 55 chr2 56776564 56777202 -196479381 - PABL_B LTR ERV1 0 667 24 246 220 0 0 chr2 56777230 56777280 -196479303 - PABL_B LTR ERV1 -617 50 1 7475 49 1 0 chr2 56777822 56779406 -196477177 - L1PA5 LINE L1 0 6154 4570 1497 82 0 0 chr2 56779406 56779601 -196476982 + L1PA5 LINE L1 4379 4573 -1573 197 318 57 0 chr2 56779606 56779694 -196476889 - L2 LINE L2 -248 3024 2932 469 202 84 8 chr2 56779776 56779895 -196476688 + LTR23 LTR ERV1 1 128 -309 1556 201 0 48 chr2 56779895 56780209 -196476374 - AluJb SINE Alu -13 299 1 729 315 0 0 chr2 56780332 56780532 -196476051 - L2 LINE L2 -560 2754 2555 387 230 27 0 chr2 56780656 56780730 -196475853 + MER7A DNA MER2_type 1 76 -272 319 78 176 0 chr2 56780732 56780783 -196475800 + U7 snRNA snRNA 2 61 -2 1955 104 0 0 chr2 56780800 56781049 -196475534 + AluSx SINE Alu 29 277 -35 1956 141 0 0 chr2 56781066 56781350 -196475233 + MER7A DNA MER2_type 63 344 -2 325 266 13 114 chr2 56781397 56781427 -196475156 + MIR SINE MIR 6 37 -225 2411 83 0 3 chr2 56781427 56781729 -196474854 + AluSg SINE Alu 3 303 -7 325 266 13 114 chr2 56781729 56781856 -196474727 + MIR SINE MIR 37 147 -115 2463 80 0 0 chr2 56781950 56782261 -196474322 - AluY SINE Alu 0 311 1 227 163 23 93 chr2 56782613 56782699 -196473884 + L1MDa LINE L1 2509 2588 -3952 387 150 192 7 chr2 56782757 56782782 -196473801 - MLT1D LTR MaLR -412 93 74 1901 125 11 7 chr2 56782782 56783090 -196473493 - AluSx SINE Alu 0 309 1 387 150 192 7 chr2 56783090 56783167 -196473416 - MLT1D LTR MaLR -431 74 1 1866 166 0 7 chr2 56783811 56784106 -196472477 - AluSx SINE Alu -14 298 6 1737 186 10 0 chr2 56784113 56784404 -196472179 - AluJb SINE Alu -18 294 1 354 342 76 49 chr2 56784846 56785109 -196471474 + L2 LINE L2 2911 3180 -92 588 209 65 22 chr2 56785146 56785285 -196471298 - MIR SINE MIR -21 241 97 1064 256 101 50 chr2 56785338 56785370 -196471213 - L2 LINE L2 0 3313 3284 360 0 0 0 chr2 56785370 56785410 -196471173 + (TA)n Simple_repeat Simple_repeat 1 40 0 1064 256 101 50 chr2 56785410 56785862 -196470721 - L2 LINE L2 -29 3284 2804 1703 180 3 25 chr2 56785971 56786288 -196470295 - AluJb SINE Alu -2 310 1 819 143 56 0 chr2 56786288 56786414 -196470169 - AluSg SINE Alu -177 133 1 250 211 0 28 chr2 56786426 56786497 -196470086 - L2 LINE L2 -568 2746 2678 905 183 12 12 chr2 56786497 56786516 -196470067 - AluJ SINE Alu -7 305 287 459 0 0 0 chr2 56786516 56786567 -196470016 + (TG)n Simple_repeat Simple_repeat 2 52 0 905 183 12 12 chr2 56786567 56786716 -196469867 - AluJ SINE Alu -24 288 137 3717 230 98 122 chr2 56786719 56787810 -196468773 - L2 LINE L2 -627 2687 1516 973 120 0 0 chr2 56787810 56787943 -196468640 - AluJ SINE Alu -179 133 1 3717 230 98 122 chr2 56787943 56788455 -196468128 - L2 LINE L2 -1798 1516 993 1023 158 6 0 chr2 56788492 56788650 -196467933 - FRAM SINE Alu -6 160 2 2363 91 7 0 chr2 56788695 56789002 -196467581 - AluSp SINE Alu -4 309 1 260 27 27 0 chr2 56789758 56789795 -196466788 + (TG)n Simple_repeat Simple_repeat 2 39 0 919 237 91 20 chr2 56790000 56790253 -196466330 + MER20B DNA MER1_type 1 271 -512 435 219 88 44 chr2 56790248 56790408 -196466175 + MER20B DNA MER1_type 615 781 -2 * 1448 147 70 40 chr2 56791009 56791281 -196465302 + AluJb SINE Alu 1 280 -32 4387 121 13 2 chr2 56791532 56792128 -196464455 + LTR26 LTR ERV1 1 603 0 2329 89 0 0 chr2 56792231 56792523 -196464060 + AluY SINE Alu 1 292 -19 2083 132 10 0 chr2 56792585 56792889 -196463694 + AluJb SINE Alu 1 307 -5 1984 117 10 36 chr2 56792892 56793199 -196463384 + AluSx SINE Alu 3 301 -11 1027 183 17 33 chr2 56793365 56793545 -196463038 + MER45A DNA AcHobo 1 177 -1 648 207 121 2 chr2 56793552 56793705 -196462878 + MIR SINE MIR 19 188 -62 22 35 0 0 chr2 56794802 56794831 -196461752 + AT_rich Low_complexity Low_complexity 1 29 0 1548 207 10 7 chr2 56794840 56795139 -196461444 + AluJb SINE Alu 1 300 -12 821 179 48 7 chr2 56795213 56795358 -196461225 - FRAM SINE Alu -12 154 4 308 106 0 21 chr2 56795361 56795408 -196461175 - L1MB3 LINE L1 -47 6136 6091 1911 128 51 0 chr2 56795689 56795962 -196460621 + AluSx SINE Alu 1 287 -25 230 242 125 25 chr2 56796036 56796156 -196460427 + L2 LINE L2 1576 1707 -1607 244 269 46 102 chr2 56796249 56796446 -196460137 - HAL1 LINE L1 -1 2506 2321 * 1459 155 82 23 chr2 56796444 56796747 -196459836 - L1MD3 LINE L1 -1029 6966 6646 511 143 36 0 chr2 56796747 56796831 -196459752 - MER6 DNA MER2_type 0 865 58 437 194 54 0 chr2 56796864 56796957 -196459626 - MER6B DNA MER2_type -70 140 43 1525 179 17 10 chr2 56796965 56797267 -196459316 + AluJo SINE Alu 4 307 -5 492 278 19 2 chr2 56797285 56797424 -196459159 - L1MC3 LINE L1 -18 6148 6012 1515 190 17 10 chr2 56797471 56797760 -196458823 - AluJo SINE Alu -12 300 10 2042 127 0 7 chr2 56798460 56798779 -196457804 + AluSx SINE Alu 2 318 0 234 193 0 0 chr2 56798782 56798839 -196457744 + GA-rich Low_complexity Low_complexity 1 57 0 768 187 82 23 chr2 56799604 56799775 -196456808 + LTR41 LTR ERVL 1 181 -592 327 240 143 25 chr2 56800343 56800578 -196456005 + LTR41 LTR ERVL 507 792 -3 2158 112 3 0 chr2 56801725 56802012 -196454571 - AluSx SINE Alu -4 308 21 22 0 0 0 chr2 56802074 56802096 -196454487 + AT_rich Low_complexity Low_complexity 1 22 0 434 301 25 56 chr2 56802173 56802369 -196454214 - MIR SINE MIR -50 212 23 355 250 110 60 chr2 56804947 56805307 -196451276 - HAL1 LINE L1 -6 2501 2160 2379 122 42 118 chr2 56805307 56805833 -196450750 - LTR19A LTR ERV1 0 486 1 355 250 110 60 chr2 56805833 56805903 -196450680 - HAL1 LINE L1 -347 2160 2095 2047 128 26 3 chr2 56805903 56806207 -196450376 - AluSq SINE Alu -1 312 2 355 250 110 60 chr2 56806207 56807273 -196449310 - HAL1 LINE L1 -412 2095 826 246 279 36 77 chr2 56807440 56807662 -196448921 - HAL1 LINE L1 -2214 293 81 24 0 0 0 chr2 56807701 56807725 -196448858 + AT_rich Low_complexity Low_complexity 1 24 0 817 173 0 8 chr2 56807725 56807852 -196448731 - FLAM_C SINE Alu -7 126 1 285 266 76 76 chr2 56807989 56808147 -196448436 + MLT1K LTR MaLR 37 194 -394 432 305 0 8 chr2 56808228 56808359 -196448224 - LTR67 LTR ERVL 0 557 428 496 194 19 19 chr2 56808379 56808487 -196448096 - MLT1D LTR MaLR -2 503 396 815 213 7 0 chr2 56808490 56808631 -196447952 + AluJo SINE Alu 3 144 -168 578 166 65 29 chr2 56808682 56808821 -196447762 + MER20B DNA MER1_type 629 772 -11 502 217 28 84 chr2 56809675 56809818 -196446765 - L2 LINE L2 -1 3271 3137 39 31 0 16 chr2 56809818 56809864 -196446719 + AT_rich Low_complexity Low_complexity 1 47 -16 807 169 0 0 chr2 56809864 56809982 -196446601 - FLAM_C SINE Alu -15 118 1 39 31 0 16 chr2 56809982 56809999 -196446584 + AT_rich Low_complexity Low_complexity 47 63 0 977 255 68 3 chr2 56810069 56810515 -196446068 + LTR33 LTR ERVL 5 514 -7 766 147 16 23 chr2 56810716 56810845 -196445738 - FLAM_C SINE Alu -5 128 1 273 261 134 93 chr2 56810845 56811136 -196445447 + LTR67 LTR ERVL 13 315 -242 333 238 0 12 chr2 56811217 56811297 -196445286 + LTR67 LTR ERVL 474 552 -5 314 321 131 68 chr2 56811334 56811506 -196445077 - L2 LINE L2 -512 2802 2642 2235 84 0 0 chr2 56811506 56811822 -196444761 + AluSg SINE Alu 7 322 0 314 321 131 68 chr2 56811822 56812000 -196444583 - L2 LINE L2 -672 2642 2429 1979 138 72 36 chr2 56812790 56813152 -196443431 + THE1C LTR MaLR 1 375 0 236 322 83 16 chr2 56813618 56813739 -196442844 + MIR3 SINE MIR 3 131 -77 239 296 0 0 chr2 56815063 56815117 -196441466 + MLT1K LTR MaLR 209 262 -326 234 221 23 81 chr2 56815346 56815432 -196441151 + MLT1K LTR MaLR 523 588 0 25 31 0 0 chr2 56815576 56815608 -196440975 + AT_rich Low_complexity Low_complexity 1 32 0 1788 151 3 31 chr2 56815610 56815927 -196440656 - AluJo SINE Alu -4 308 1 2505 56 0 0 chr2 56816077 56816365 -196440218 + AluY SINE Alu 1 288 -23 196 29 29 29 chr2 56816368 56816402 -196440181 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2349 115 3 0 chr2 56816685 56816997 -196439586 + AluSp SINE Alu 1 313 0 1620 168 67 3 chr2 56817429 56817595 -196438988 - AluJb SINE Alu -9 303 110 282 29 0 0 chr2 56817595 56817630 -196438953 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1620 168 67 3 chr2 56817630 56817748 -196438835 - AluJb SINE Alu -202 110 1 1874 233 10 0 chr2 56817764 56818151 -196438432 + L1M4 LINE L1 3921 4311 -1835 1235 193 37 0 chr2 56818155 56818373 -196438210 - AluJb SINE Alu -5 307 82 287 154 19 0 chr2 56818373 56818425 -196438158 + L1M4 LINE L1 4317 4369 -1777 2314 93 0 0 chr2 56818425 56818714 -196437869 + AluSx SINE Alu 1 289 -23 1150 191 35 4 chr2 56818732 56818988 -196437595 + L1M4 LINE L1 4345 4608 -1538 627 214 8 17 chr2 56818994 56819137 -196437446 - AluJb SINE Alu 0 309 168 609 71 40 0 chr2 56819148 56819247 -196437336 + CT-rich Low_complexity Low_complexity 1 103 0 2108 146 7 0 chr2 56819251 56819559 -196437024 - AluSx SINE Alu -2 310 1 3623 170 32 22 chr2 56819584 56819942 -196436641 + L1M4 LINE L1 4625 4978 -1200 855 161 15 0 chr2 56819942 56820072 -196436511 + FLAM_A SINE Alu 1 132 -1 3623 170 32 22 chr2 56820072 56820753 -196435830 + L1M4 LINE L1 4978 5667 -511 1663 199 0 17 chr2 56820754 56821056 -196435527 + AluJo SINE Alu 1 297 -15 507 178 0 0 chr2 56821058 56821131 -196435452 + FLAM SINE Alu 47 119 -24 737 116 0 0 chr2 56821157 56821269 -196435314 + L1MB8 LINE L1 6057 6168 -10 387 0 0 0 chr2 56821275 56821318 -196435265 + (TG)n Simple_repeat Simple_repeat 2 44 0 2141 182 66 18 chr2 56821321 56821716 -196434867 - MLT2D LTR ERVL 0 414 1 1964 153 3 6 chr2 56821913 56822226 -196434357 + AluSx SINE Alu 1 312 0 2184 117 0 0 chr2 56822231 56822521 -196434062 + AluSx SINE Alu 5 294 -18 399 366 0 0 chr2 56823057 56823188 -196433395 - MIR3 SINE MIR -48 160 30 195 272 117 29 chr2 56824035 56824138 -196432445 + L2 LINE L2 3202 3313 0 421 304 32 8 chr2 56824432 56824557 -196432026 - MIR3 SINE MIR -78 130 3 1951 125 80 0 chr2 56824656 56824943 -196431640 - AluSx SINE Alu -2 310 1 234 191 0 48 chr2 56825070 56825133 -196431450 + (TA)n Simple_repeat Simple_repeat 2 61 0 28 61 0 0 chr2 56825230 56825279 -196431304 + AT_rich Low_complexity Low_complexity 1 49 0 2225 102 7 0 chr2 56825301 56825594 -196430989 - AluSx SINE Alu -17 295 1 901 195 33 29 chr2 56826386 56826596 -196429987 - MER69 DNA AcHobo 0 2526 2316 1053 178 180 72 chr2 56826994 56827180 -196429403 - MER69 DNA AcHobo -198 2328 2164 2410 89 3 0 chr2 56827180 56827484 -196429099 - AluSq SINE Alu -8 305 1 773 201 0 15 chr2 56827487 56827621 -196428962 - AluJo/FLAM SINE Alu -169 133 2 1053 178 180 72 chr2 56827621 56827846 -196428737 - MER69 DNA AcHobo -363 2163 1868 655 231 113 25 chr2 56827880 56828012 -196428571 - MER69 DNA AcHobo -438 788 630 1803 174 22 63 chr2 56828012 56828374 -196428209 + MER7A DNA MER2_type 1 345 -1 655 231 113 25 chr2 56828374 56828444 -196428139 - MER69 DNA AcHobo -596 630 568 2186 132 0 0 chr2 56828939 56829242 -196427341 - AluSx SINE Alu -9 303 1 2258 109 7 0 chr2 56829490 56829792 -196426791 + AluSx SINE Alu 1 304 -8 878 184 43 29 chr2 56830538 56830745 -196425838 - MER69 DNA AcHobo -3 2523 2314 2281 113 10 0 chr2 56830979 56831288 -196425295 - AluSx SINE Alu 0 312 1 595 251 32 84 chr2 56831565 56831748 -196424835 + L1MC4 LINE L1 7713 7871 -171 3323 150 12 74 chr2 56831748 56832393 -196424190 + MER6A DNA MER2_type 1 605 0 595 251 32 84 chr2 56832393 56832556 -196424027 + L1MC4 LINE L1 7871 8041 -1 2058 133 3 3 chr2 56832640 56832940 -196423643 - AluSx SINE Alu -11 301 2 447 236 64 0 chr2 56833497 56833637 -196422946 - MER103 DNA DNA -2 164 16 1819 172 0 10 chr2 56834041 56834337 -196422246 - AluJb SINE Alu -9 303 11 251 269 0 0 chr2 56834427 56834479 -196422104 + (TGGA)n Simple_repeat Simple_repeat 4 55 0 23 0 0 0 chr2 56835980 56836003 -196420580 + AT_rich Low_complexity Low_complexity 1 23 0 462 181 0 48 chr2 56836007 56836090 -196420493 + AluJ/FLAM SINE Alu 2 80 -232 1677 157 33 7 chr2 56836166 56836440 -196420143 + AluJb SINE Alu 6 286 -26 2139 122 3 0 chr2 56836560 56836855 -196419728 + AluSx SINE Alu 1 296 -16 2144 112 0 7 chr2 56837045 56837341 -196419242 + AluSg SINE Alu 1 294 -16 507 182 86 86 chr2 56837890 56838099 -196418484 + HAL1 LINE L1 2151 2359 -148 1880 150 7 0 chr2 56838186 56838508 -196418075 - AluSx SINE Alu 0 324 1 242 337 135 22 chr2 56838596 56838958 -196417625 - L2 LINE L2 -654 2660 2258 290 309 8 0 chr2 56839174 56839297 -196417286 + MERVL LTR ERVL 5161 5284 -201 608 283 141 14 chr2 56839491 56839866 -196416717 + LTR16A LTR ERVL 16 457 0 463 272 44 58 chr2 56839882 56840088 -196416495 + HAL1 LINE L1 2245 2447 -60 306 251 77 94 chr2 56840194 56840355 -196416228 + MIR SINE MIR 8 161 -101 2364 70 0 0 chr2 56840355 56840671 -196415912 + AluY SINE Alu 1 316 0 306 251 77 94 chr2 56840671 56840725 -196415858 + MIR SINE MIR 161 214 -48 2304 94 3 7 chr2 56840926 56841225 -196415358 - AluSx SINE Alu -14 298 1 189 0 0 0 chr2 56841229 56841250 -196415333 + (TG)n Simple_repeat Simple_repeat 2 22 0 1823 156 0 0 chr2 56841250 56841532 -196415051 - AluJb SINE Alu -28 284 3 203 156 44 0 chr2 56841538 56841583 -196415000 + T-rich Low_complexity Low_complexity 1 47 0 6769 53 14 46 chr2 56841590 56842709 -196413874 - SVA Other Other -589 1378 433 5912 65 29 21 chr2 56842723 56843576 -196413007 - SVA Other Other -520 866 7 790 178 0 0 chr2 56843595 56843713 -196412870 - FLAM_C SINE Alu -15 118 1 897 227 68 39 chr2 56843810 56844118 -196412465 + L2 LINE L2 2996 3312 -1 486 248 55 79 chr2 56844261 56844551 -196412032 - L1MC5 LINE L1 -37 7924 7642 2059 135 0 20 chr2 56844555 56844972 -196411611 - AluSx SINE Alu 0 411 1 333 276 132 39 chr2 56844972 56845229 -196411354 - L1MC5 LINE L1 -307 7654 7374 1990 159 3 3 chr2 56845430 56845732 -196410851 - AluJo SINE Alu -10 302 1 5282 129 28 33 chr2 56845851 56846735 -196409848 - L1MA8 LINE L1 0 6291 5412 1554 189 10 30 chr2 56847007 56847308 -196409275 - AluJb SINE Alu -13 299 5 2268 86 7 17 chr2 56848092 56848394 -196408189 + AluSg SINE Alu 1 299 -11 198 167 0 0 chr2 56848420 56848456 -196408127 + CT-rich Low_complexity Low_complexity 4 39 0 1936 145 41 12 chr2 56848458 56848796 -196407787 - L1MC2 LINE L1 0 6344 5997 466 197 90 16 chr2 56848807 56848929 -196407654 - L1MC2 LINE L1 -515 5606 5476 375 289 202 9 chr2 56849044 56849262 -196407321 - MLT1K LTR MaLR -47 541 282 1303 244 59 98 chr2 56849284 56849812 -196406771 - MLT1K LTR MaLR -3 585 79 256 213 154 43 chr2 56850267 56850400 -196406183 + MIR SINE MIR 58 205 -3 23 0 0 0 chr2 56851086 56851109 -196405474 + AT_rich Low_complexity Low_complexity 1 23 0 477 292 65 13 chr2 56851406 56851560 -196405023 + MER5B DNA MER1_type 1 162 -16 311 298 144 19 chr2 56851846 56852134 -196404449 + L2 LINE L2 2739 3054 -218 1551 131 42 101 chr2 56852170 56852495 -196404088 - AluJb SINE Alu 0 312 3 339 208 83 0 chr2 56852514 56852586 -196403997 + L2 LINE L2 3195 3272 0 29 0 0 0 chr2 56852929 56852958 -196403625 + AT_rich Low_complexity Low_complexity 1 29 0 566 159 234 0 chr2 56852958 56853065 -196403518 - AluJb SINE Alu -178 134 3 2142 86 7 14 chr2 56853297 56853587 -196402996 - AluSq SINE Alu -25 288 1 226 331 179 7 chr2 56854370 56854515 -196402068 + MER5B DNA MER1_type 8 177 -1 3412 75 4 29 chr2 56855817 56856269 -196400314 + L1PB1 LINE L1 5708 6148 -3 28 0 0 0 chr2 56856270 56856298 -196400285 + AT_rich Low_complexity Low_complexity 1 28 0 1780 148 28 84 chr2 56856401 56856792 -196399791 - L1MC3 LINE L1 -6 7779 7411 830 257 52 40 chr2 56856819 56857220 -196399363 - L1MC5 LINE L1 -32 7929 7524 341 221 39 52 chr2 56859094 56859206 -196397377 + L1ME LINE L1 5527 5618 -503 1227 216 114 25 chr2 56859715 56859944 -196396639 + MER2 DNA MER2_type 2 268 -76 1836 144 0 20 chr2 56859944 56860243 -196396340 - AluJb SINE Alu -13 299 7 1227 216 114 25 chr2 56860243 56860328 -196396255 + MER2 DNA MER2_type 268 344 0 189 0 0 0 chr2 56861084 56861105 -196395478 + (A)n Simple_repeat Simple_repeat 1 21 0 2184 112 0 0 chr2 56861105 56861392 -196395191 + AluSq SINE Alu 1 287 -26 1465 155 99 25 chr2 56861711 56862033 -196394550 + L1MA9 LINE L1 5962 6307 -5 1176 180 76 63 chr2 56862930 56863324 -196393259 - Charlie2 DNA MER1_type -77 2785 2387 2971 139 70 14 chr2 56863345 56863862 -196392721 - LTR10A LTR ERV1 -63 546 1 298 204 105 40 chr2 56863862 56863986 -196392597 - Charlie2 DNA MER1_type -471 2391 2254 1789 138 16 35 chr2 56863986 56864297 -196392286 - AluJo SINE Alu -7 305 1 298 204 105 40 chr2 56864297 56864324 -196392259 - Charlie2 DNA MER1_type -608 2254 2230 949 201 83 105 chr2 56864354 56864477 -196392106 - Charlie2 DNA MER1_type -2471 311 187 2116 84 3 17 chr2 56864477 56864764 -196391819 - L1PB1 LINE L1 -2 6149 5867 949 201 83 105 chr2 56864764 56864953 -196391630 - Charlie2 DNA MER1_type -2595 187 6 300 339 142 6 chr2 56865101 56865284 -196391299 - MIR SINE MIR -44 218 11 521 293 105 0 chr2 56865565 56865756 -196390827 - MIR SINE MIR -11 251 41 1631 150 51 24 chr2 56865756 56866049 -196390534 - AluJo SINE Alu 0 312 12 239 146 42 0 chr2 56866050 56866098 -196390485 + Alu SINE Alu 251 300 0 2693 142 21 24 chr2 56866422 56866899 -196389684 - L1MC2 LINE L1 -146 7639 6138 908 223 125 90 chr2 56867270 56868190 -196388393 - MER52A LTR ERV1 0 1755 660 479 262 176 14 chr2 56868618 56868828 -196387755 + L3 LINE CR1 1188 1431 -146 460 158 237 26 chr2 56870180 56870332 -196386251 - L1MB7 LINE L1 -19 6165 5982 445 188 82 24 chr2 56870588 56870721 -196385862 - MLT1L LTR MaLR -369 142 1 2416 77 0 3 chr2 56870900 56871199 -196385384 - AluSp SINE Alu -15 298 1 1072 173 23 153 chr2 56871403 56871756 -196384827 - AluYb8 SINE Alu -1 307 1 3477 160 24 49 chr2 56871992 56872171 -196384412 - Ricksha DNA DNA -13 3238 3056 2323 100 0 0 chr2 56872171 56872471 -196384112 + AluSq SINE Alu 1 300 -13 3477 160 24 49 chr2 56872471 56872503 -196384080 - Ricksha DNA DNA -195 3056 3025 2232 117 3 0 chr2 56872503 56872812 -196383771 + AluSx SINE Alu 1 310 -2 3477 160 24 49 chr2 56872812 56873368 -196383215 - Ricksha DNA DNA -226 3025 2547 2255 82 0 20 chr2 56873369 56873674 -196382909 + AluSq SINE Alu 1 299 -14 6596 153 15 27 chr2 56873674 56874153 -196382430 - Ricksha DNA DNA -824 2422 1939 2081 96 6 68 chr2 56874153 56874475 -196382108 + AluY SINE Alu 1 302 -9 6596 153 15 27 chr2 56874475 56875089 -196381494 - Ricksha DNA DNA -1307 1939 1340 1545 216 3 10 chr2 56875089 56875380 -196381203 + AluJo SINE Alu 1 289 -23 6596 153 15 27 chr2 56875380 56875412 -196381171 - Ricksha DNA DNA -1906 1340 1309 846 126 0 16 chr2 56875465 56875592 -196380991 - Ricksha DNA DNA -1932 1314 1190 * 2801 130 12 0 chr2 56875586 56875994 -196380589 - Ricksha DNA DNA -2745 501 89 867 165 0 0 chr2 56876003 56876136 -196380447 - FLAM_C SINE Alu -10 133 1 434 145 0 0 chr2 56876136 56876198 -196380385 - Ricksha DNA DNA -3159 87 26 248 196 47 28 chr2 56876277 56876384 -196380199 + (TA)n Simple_repeat Simple_repeat 1 109 0 246 206 66 7 chr2 56876510 56876646 -196379937 + (TA)n Simple_repeat Simple_repeat 2 145 0 1049 259 164 15 chr2 56876700 56877327 -196379256 - L2 LINE L2 -9 3304 2587 251 310 54 144 chr2 56877480 56877793 -196378790 + L2 LINE L2 2902 3186 -86 568 250 110 12 chr2 56878505 56878669 -196377914 - MER5A DNA MER1_type 0 189 10 1702 178 60 35 chr2 56879384 56879448 -196377135 - L1ME1 LINE L1 -1 6165 6104 2287 107 3 0 chr2 56879448 56879747 -196376836 - AluSx SINE Alu -12 300 1 1702 178 60 35 chr2 56879747 56880080 -196376503 - L1ME1 LINE L1 -62 6104 5758 853 142 15 0 chr2 56880861 56881040 -196375543 + FRAM SINE Alu 11 191 0 396 226 0 32 chr2 56881445 56881538 -196375045 - Tigger7 DNA MER2_type 0 2487 2398 * 3256 147 87 9 chr2 56881535 56882074 -196374509 - Tigger7 DNA MER2_type -150 583 3 1880 153 3 7 chr2 56882615 56882902 -196373681 - AluSx SINE Alu -26 286 1 969 153 6 45 chr2 56882902 56883011 -196373572 - AluSx SINE Alu -177 135 34 24 0 0 0 chr2 56883032 56883056 -196373527 + AT_rich Low_complexity Low_complexity 1 24 0 2358 98 0 0 chr2 56883397 56883694 -196372889 + AluSq SINE Alu 1 297 -16 5459 119 10 2 chr2 56883993 56884878 -196371705 - L1PA13 LINE L1 -16 6147 5256 943 172 19 0 chr2 56885500 56885657 -196370926 - AluJb SINE Alu -16 296 137 465 211 67 10 chr2 56886242 56886346 -196370237 - MIR SINE MIR 0 262 153 21 36 0 0 chr2 56886982 56887010 -196369573 + AT_rich Low_complexity Low_complexity 1 28 0 240 86 0 0 chr2 56887232 56887267 -196369316 + (CA)n Simple_repeat Simple_repeat 1 35 0 401 286 94 38 chr2 56887300 56887513 -196369070 - L1MC4a LINE L1 -1888 5920 5696 596 260 114 32 chr2 56887526 56888358 -196368225 - L1MC4a LINE L1 -578 5664 4757 1203 188 100 8 chr2 56888544 56888687 -196367896 - AluJb SINE Alu -16 296 168 261 0 0 0 chr2 56888687 56888716 -196367867 + (TG)n Simple_repeat Simple_repeat 2 30 0 297 0 0 0 chr2 56888721 56888754 -196367829 + (TTG)n Simple_repeat Simple_repeat 1 33 0 1203 188 100 8 chr2 56888754 56888854 -196367729 - AluJb SINE Alu -147 165 24 1199 137 21 4 chr2 56888854 56889088 -196367495 - L1MC3 LINE L1 -6 7779 7542 1918 159 10 3 chr2 56889144 56889452 -196367131 + AluSx SINE Alu 1 310 -2 303 305 21 40 chr2 56889461 56889789 -196366794 - L1MC4a LINE L1 -1590 4556 4235 303 320 7 7 chr2 56889844 56889991 -196366592 - L1MC4a LINE L1 -2005 4141 3995 1038 309 75 65 chr2 56890006 56890133 -196366450 - L1MC4a LINE L1 -2324 3822 3698 225 0 0 0 chr2 56890133 56890158 -196366425 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 2103 120 0 0 chr2 56890160 56890435 -196366148 - AluSg SINE Alu -35 275 1 1038 309 75 65 chr2 56890435 56890681 -196365902 - L1MC4a LINE L1 -2448 3698 3456 1814 187 0 10 chr2 56890681 56890975 -196365608 - AluJo SINE Alu -20 292 2 1038 309 75 65 chr2 56890975 56891098 -196365485 - L1MC4a LINE L1 -2690 3456 3336 2368 91 3 0 chr2 56891098 56891395 -196365188 + AluSg SINE Alu 1 298 -12 1038 309 75 65 chr2 56891395 56891919 -196364664 - L1MC4a LINE L1 -2810 3336 2787 263 246 79 18 chr2 56892013 56892127 -196364456 - MLT1L LTR MaLR -6 609 489 294 277 28 40 chr2 56892205 56892382 -196364201 - L1MC5 LINE L1 -54 7907 7733 879 260 167 16 chr2 56892575 56893025 -196363558 - HAL1 LINE L1 -604 1903 1386 872 143 0 0 chr2 56893145 56893278 -196363305 - AluSq/x SINE Alu -179 133 1 585 211 173 87 chr2 56893283 56893503 -196363080 - HAL1 LINE L1 -1314 1193 941 2331 95 0 3 chr2 56893503 56893799 -196362784 - AluSx SINE Alu -17 295 1 585 211 173 87 chr2 56893799 56893867 -196362716 - HAL1 LINE L1 -1566 941 880 305 286 35 76 chr2 56894095 56894224 -196362359 - HAL1 LINE L1 -2211 296 174 1995 164 0 0 chr2 56894224 56894528 -196362055 - AluJo SINE Alu -8 304 1 305 286 35 76 chr2 56894528 56894569 -196362014 - HAL1 LINE L1 -2333 174 133 292 229 83 49 chr2 56894581 56894725 -196361858 - MLT1L LTR MaLR 0 615 467 284 290 0 0 chr2 56894864 56894933 -196361650 - MLT1J LTR MaLR -334 177 109 366 250 12 0 chr2 56895109 56895193 -196361390 + MIR SINE MIR 177 261 -1 445 257 44 7 chr2 56895248 56895384 -196361199 - L2 LINE L2 -1000 2314 2174 337 23 0 0 chr2 56895622 56895665 -196360918 - MADE1 DNA Mariner -37 43 1 928 160 7 0 chr2 56895675 56895819 -196360764 + AluJb SINE Alu 3 147 -165 640 271 72 25 chr2 56896434 56896670 -196359913 + L3 LINE CR1 1071 1317 -260 883 188 5 46 chr2 56896814 56897011 -196359572 + MER58A DNA MER1_type 36 224 0 293 253 66 33 chr2 56897030 56897113 -196359470 + L3 LINE CR1 1481 1569 -8 1973 147 0 3 chr2 56897113 56897425 -196359158 - AluSx SINE Alu -1 311 1 2571 58 0 0 chr2 56897435 56897743 -196358840 - AluY SINE Alu -2 309 2 3294 147 10 32 chr2 56898595 56898819 -196357764 - L1MC2 LINE L1 -5 6339 6112 1839 166 7 23 chr2 56898819 56899127 -196357456 - AluJo SINE Alu -9 303 1 3294 147 10 32 chr2 56899127 56899530 -196357053 - L1MC2 LINE L1 -232 6112 5726 699 197 8 0 chr2 56899543 56899665 -196356918 - FLAM_A SINE Alu -10 123 1 26 64 0 0 chr2 56899704 56899751 -196356832 + AT_rich Low_complexity Low_complexity 1 47 0 9058 161 32 37 chr2 56899759 56900297 -196356286 - L1 LINE L1 -1083 5063 4524 2442 85 0 3 chr2 56900297 56900603 -196355980 - AluY SINE Alu -6 305 1 9058 161 32 37 chr2 56900603 56902114 -196354469 - L1 LINE L1 -1622 4524 3024 1411 128 179 15 chr2 56902119 56902392 -196354191 + MER1B DNA MER1_type 1 318 -21 1566 158 16 158 chr2 56902392 56902905 -196353678 - L1 LINE L1 -3120 3026 2587 2768 75 22 0 chr2 56902972 56903334 -196353249 - L1PA10 LINE L1 -11 6157 5788 2074 121 0 10 chr2 56903375 56903672 -196352911 - AluSx SINE Alu -18 294 1 29 0 0 0 chr2 56903680 56903709 -196352874 + AT_rich Low_complexity Low_complexity 1 29 0 374 294 93 32 chr2 56903982 56904230 -196352353 - L1ME4a LINE L1 -171 5950 5688 758 245 124 58 chr2 56904250 56904597 -196351986 - L2 LINE L2 -1 3312 2943 406 214 51 0 chr2 56904616 56904714 -196351869 + MER97c DNA MER1_type? 21 123 -967 2002 138 0 49 chr2 56904719 56905045 -196351538 - AluSx SINE Alu -2 310 1 805 163 0 0 chr2 56905085 56905208 -196351375 - FLAM_C SINE Alu -19 124 2 313 89 0 0 chr2 56905209 56905254 -196351329 + MER97c DNA MER1_type? 112 156 -934 951 104 0 15 chr2 56906076 56906211 -196350372 - FLAM_C SINE Alu 0 133 1 246 224 179 22 chr2 56906918 56907052 -196349531 - MLT1L LTR MaLR -221 394 240 443 205 24 0 chr2 56907186 56907269 -196349314 + L2 LINE L2 3153 3237 -35 271 318 249 42 chr2 56907304 56907593 -196348990 - L2 LINE L2 -337 2977 2629 794 258 33 0 chr2 56907674 56907856 -196348727 + MER5A DNA MER1_type 1 188 -1 558 198 12 87 chr2 56907923 56908095 -196348488 + MER5B DNA MER1_type 20 178 0 27 0 0 0 chr2 56908240 56908267 -196348316 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr2 56908587 56908615 -196347968 + AT_rich Low_complexity Low_complexity 1 28 0 26 30 0 0 chr2 56908652 56908685 -196347898 + AT_rich Low_complexity Low_complexity 1 33 0 773 132 0 47 chr2 56909187 56909316 -196347267 + MER5A DNA MER1_type 15 137 -52 1521 179 41 7 chr2 56909387 56909503 -196347080 + AluJb SINE Alu 1 112 -200 210 37 0 0 chr2 56909503 56909530 -196347053 + (CAA)n Simple_repeat Simple_repeat 1 27 0 1521 179 41 7 chr2 56909530 56909703 -196346880 + AluJb SINE Alu 112 300 -12 422 281 21 0 chr2 56909785 56909881 -196346702 - MER5A DNA MER1_type -83 106 9 2054 122 0 3 chr2 56910276 56910571 -196346012 + AluSq SINE Alu 1 294 -19 321 288 88 24 chr2 56910575 56910700 -196345883 - L2 LINE L2 -6 3307 3175 3295 79 2 11 chr2 56911393 56911862 -196344721 - L1PA8 LINE L1 0 6172 5708 245 222 0 0 chr2 56912107 56912152 -196344431 - L3 LINE CR1 -7 1570 1526 360 153 0 0 chr2 56912154 56912239 -196344344 + CT-rich Low_complexity Low_complexity 2 86 0 342 0 0 0 chr2 56912239 56912277 -196344306 + (CA)n Simple_repeat Simple_repeat 1 38 0 416 262 68 0 chr2 56912969 56913072 -196343511 - L2 LINE L2 0 3313 3204 22 35 0 0 chr2 56913615 56913644 -196342939 + AT_rich Low_complexity Low_complexity 1 29 0 362 138 17 0 chr2 56913649 56913707 -196342876 - U7 snRNA snRNA 0 63 5 544 307 17 17 chr2 56913890 56914066 -196342517 - L3 LINE CR1 -802 775 600 237 289 38 19 chr2 56914303 56914462 -196342121 + L1MC5 LINE L1 7613 7774 -187 2006 122 3 7 chr2 56914846 56915179 -196341404 + AluSx SINE Alu 1 332 0 510 179 120 26 chr2 56916161 56916278 -196340305 - FLAM_C SINE Alu -5 128 1 22 70 0 0 chr2 56916431 56916474 -196340109 + AT_rich Low_complexity Low_complexity 1 43 0 479 288 116 55 chr2 56916484 56916811 -196339772 - HAL1 LINE L1 -37 2470 2124 2111 130 0 0 chr2 56916857 56917156 -196339427 - AluSx SINE Alu -13 299 1 1814 167 3 17 chr2 56918635 56918935 -196337648 + AluJo SINE Alu 1 296 -16 17092 51 9 3 chr2 56919310 56922321 -196334262 - L1PA5 LINE L1 -3 6151 3066 348 151 0 10 chr2 56922321 56922392 -196334191 - Alu SINE Alu -252 48 1 1229 261 84 24 chr2 56922419 56922513 -196334070 + MLT1J LTR MaLR 1 88 -423 1891 185 31 8 chr2 56922513 56922870 -196333713 + MLT1A1 LTR MaLR 1 365 0 1229 261 84 24 chr2 56922870 56923189 -196333394 + MLT1J LTR MaLR 88 439 -72 883 278 55 11 chr2 56923473 56923746 -196332837 + LTR16A LTR ERVL 166 450 0 1566 252 99 4 chr2 56923799 56924272 -196332311 + LTR33 LTR ERVL 3 520 -1 2254 106 0 7 chr2 56924278 56924581 -196332002 - AluSx SINE Alu -11 301 1 1615 136 0 4 chr2 56924595 56924831 -196331752 - AluSg/x SINE Alu -1 309 75 1405 165 0 4 chr2 56925586 56925822 -196330761 - MLT1A1 LTR MaLR 0 365 131 3146 174 78 87 chr2 56925870 56926071 -196330512 - MER21B LTR ERV1 -14 849 648 3940 82 26 2 chr2 56926071 56926611 -196329972 - MER41A LTR ERV1 -1 553 1 3146 174 78 87 chr2 56926611 56927253 -196329330 - MER21B LTR ERV1 -215 648 13 1911 166 3 3 chr2 56927258 56927554 -196329029 - AluJb SINE Alu -16 296 1 809 167 0 0 chr2 56927579 56927717 -196328866 - MLT1A1 LTR MaLR -227 138 1 432 251 157 25 chr2 56927775 56928010 -196328573 - L2 LINE L2 0 3313 3048 338 247 141 0 chr2 56928363 56928448 -196328135 - L2 LINE L2 -5 3308 3212 2157 111 0 0 chr2 56928747 56929036 -196327547 - AluSg SINE Alu 0 310 22 1536 197 22 7 chr2 56929061 56929335 -196327248 - AluJb SINE Alu -32 280 3 1086 180 84 62 chr2 56929733 56930088 -196326495 - Zaphod DNA AcHobo -49 3982 3620 1033 162 0 0 chr2 56930096 56930250 -196326333 + AluJb SINE Alu 148 301 -11 1537 227 89 29 chr2 56930298 56931142 -196325441 - Zaphod DNA AcHobo -3061 970 9 1685 92 0 9 chr2 56931545 56931774 -196324809 - AluSg/x SINE Alu -12 297 71 273 321 27 0 chr2 56931847 56931959 -196324624 + MLT1L LTR MaLR 140 254 -361 273 321 98 45 chr2 56931984 56932230 -196324353 + MLT1L LTR MaLR 344 602 -13 308 280 90 33 chr2 56932643 56932854 -196323729 + L1ME4a LINE L1 5256 5478 -2330 457 103 10 62 chr2 56932861 56932958 -196323625 + L1MB5 LINE L1 6083 6174 0 373 303 55 37 chr2 56932989 56933200 -196323383 + L1ME4a LINE L1 5487 5693 -428 192 77 0 0 chr2 56933200 56933226 -196323357 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2280 92 0 0 chr2 56933230 56933513 -196323070 - AluSq SINE Alu -30 283 1 373 303 55 37 chr2 56933513 56933623 -196322960 + L1ME4a LINE L1 5695 5819 -302 842 213 109 65 chr2 56934481 56934848 -196321735 + MSTD LTR MaLR 7 389 -7 314 253 114 69 chr2 56935092 56935294 -196321289 + L1ME4a LINE L1 5817 6027 -94 412 122 104 17 chr2 56935384 56935475 -196321108 + MER5A DNA MER1_type 4 104 -85 396 217 258 35 chr2 56935548 56935746 -196320837 + L2 LINE L2 1459 1700 -1614 4251 186 15 41 chr2 56935755 56936969 -196319614 - L1MA9 LINE L1 -38 6274 5093 2104 243 174 67 chr2 56936970 56938118 -196318465 + L2 LINE L2 1688 2958 -356 1101 215 32 16 chr2 56938139 56938386 -196318197 + MIR SINE MIR 12 262 0 428 254 214 85 chr2 56938394 56938689 -196317894 + L2 LINE L2 2977 3309 -4 23 0 0 0 chr2 56939076 56939099 -196317484 + AT_rich Low_complexity Low_complexity 1 23 0 1953 99 88 25 chr2 56939367 56939720 -196316863 - THE1C LTR MaLR 0 375 1 343 362 68 10 chr2 56939962 56940169 -196316414 - MIR SINE MIR -10 252 34 2255 113 0 3 chr2 56940737 56941039 -196315544 - AluSx SINE Alu -11 301 1 21 0 0 0 chr2 56941253 56941274 -196315309 + AT_rich Low_complexity Low_complexity 1 21 0 338 210 183 64 chr2 56942107 56942326 -196314257 - MLT1J LTR MaLR -26 485 241 2288 129 0 0 chr2 56942494 56942797 -196313786 - AluSx SINE Alu -9 303 1 703 156 0 104 chr2 56942903 56943057 -196313526 - AluJb SINE Alu -19 293 156 204 235 20 20 chr2 56943236 56943287 -196313296 - L2 LINE L2 -7 3306 3256 953 172 64 10 chr2 56943289 56943493 -196313090 - MER20 DNA MER1_type -1 218 4 241 236 29 20 chr2 56943632 56943792 -196312791 - MIR SINE MIR -30 232 110 354 268 70 84 chr2 56943793 56944080 -196312503 - LTR16C LTR ERVL 0 491 209 734 285 109 68 chr2 56944120 56944593 -196311990 - L2 LINE L2 -71 3242 2790 189 0 0 0 chr2 56944593 56944614 -196311969 + (TTTTA)n Simple_repeat Simple_repeat 1 21 0 734 285 109 68 chr2 56944614 56944635 -196311948 - L2 LINE L2 -523 2790 2771 843 10 0 0 chr2 56944635 56944731 -196311852 + (TATTG)n Simple_repeat Simple_repeat 2 97 0 1786 122 25 11 chr2 56944731 56945010 -196311573 - AluSq SINE Alu -28 285 3 734 285 109 68 chr2 56945010 56945121 -196311462 - L2 LINE L2 -542 2771 2666 4596 181 32 66 chr2 56945121 56946197 -196310386 - MER45B DNA AcHobo 0 1040 1 734 285 109 68 chr2 56946197 56946451 -196310132 - L2 LINE L2 -647 2666 2330 470 283 43 22 chr2 56946394 56946532 -196310051 - MIR SINE MIR -121 141 1 * 327 345 36 0 chr2 56946824 56946934 -196309649 + MIR SINE MIR 34 147 -115 183 222 0 0 chr2 56946957 56947002 -196309581 + (TA)n Simple_repeat Simple_repeat 1 45 0 4094 178 67 9 chr2 56947091 56947793 -196308790 - L1MB7 LINE L1 -159 6025 5365 2496 78 0 0 chr2 56947793 56948100 -196308483 - AluY SINE Alu -4 307 1 4094 178 67 9 chr2 56948100 56948278 -196308305 - L1MB7 LINE L1 -819 5365 5199 1987 122 14 0 chr2 56948278 56948703 -196307880 - AluSx SINE Alu 0 429 1 4094 178 67 9 chr2 56948703 56948838 -196307745 - L1MB7 LINE L1 -985 5199 4918 1789 110 26 26 chr2 56948838 56949102 -196307481 - AluSx SINE Alu -48 264 1 2195 123 0 0 chr2 56949102 56949403 -196307180 - AluSx SINE Alu -10 302 1 198 0 0 0 chr2 56949403 56949425 -196307158 + (T)n Simple_repeat Simple_repeat 1 22 0 607 185 118 0 chr2 56949425 56949544 -196307039 - FLAM_A SINE Alu 0 133 1 3645 202 23 7 chr2 56949545 56950461 -196306122 - L1MB7 LINE L1 -1374 4772 3842 422 279 79 73 chr2 56950503 56950587 -196305996 - HAL1b LINE L1 -739 1532 1450 1207 84 97 88 chr2 56950587 56950675 -196305908 - MER30 DNA MER1_type -1 229 143 2049 99 14 14 chr2 56950675 56950988 -196305595 - AluSg SINE Alu 0 313 1 1207 84 97 88 chr2 56950988 56951125 -196305458 - MER30 DNA MER1_type -87 143 1 422 279 79 73 chr2 56951125 56951593 -196304990 - HAL1b LINE L1 -821 1450 228 240 114 91 0 chr2 56953671 56953715 -196302868 - MLT2D LTR ERVL 0 414 367 294 237 28 11 chr2 56953718 56953895 -196302688 + (TATATG)n Simple_repeat Simple_repeat 1 180 0 2037 158 79 5 chr2 56953897 56954289 -196302294 - MLT2C2 LTR ERVL -43 421 1 25 0 0 0 chr2 56955875 56955900 -196300683 + AT_rich Low_complexity Low_complexity 1 25 0 2346 104 3 0 chr2 56956555 56956864 -196299719 + AluSq SINE Alu 1 310 -3 21 89 0 0 chr2 56957837 56957893 -196298690 + AT_rich Low_complexity Low_complexity 1 56 0 22 0 0 0 chr2 56958292 56958314 -196298269 + AT_rich Low_complexity Low_complexity 1 22 0 186 167 0 0 chr2 56958591 56958627 -196297956 + CT-rich Low_complexity Low_complexity 2 37 0 245 250 47 31 chr2 56958689 56958753 -196297830 + L2 LINE L2 3207 3271 -1 6621 186 7 32 chr2 56959632 56960469 -196296114 - L1PA15 LINE L1 -3 6162 5306 1508 171 52 39 chr2 56960469 56960755 -196295828 - AluJb SINE Alu -22 290 1 6621 186 7 32 chr2 56960755 56962144 -196294439 - L1PA15 LINE L1 -859 5306 3952 317 249 104 62 chr2 56962190 56962499 -196294084 - L1ME4a LINE L1 -18 6103 5782 312 263 94 39 chr2 56962872 56963203 -196293380 - L1ME4a LINE L1 -1299 4847 4499 2087 142 3 0 chr2 56963238 56963526 -196293057 - AluSx SINE Alu -17 295 7 21 0 0 0 chr2 56963720 56963741 -196292842 + AT_rich Low_complexity Low_complexity 1 21 0 358 231 207 0 chr2 56963900 56964021 -196292562 + MER3 DNA MER1_type 1 146 -63 1898 144 0 20 chr2 56964057 56964355 -196292228 - AluJb SINE Alu -7 305 14 22 0 0 0 chr2 56965212 56965234 -196291349 + AT_rich Low_complexity Low_complexity 1 22 0 256 360 14 14 chr2 56966057 56966196 -196290387 - L2 LINE L2 -459 2855 2717 1367 98 0 0 chr2 56966314 56966488 -196290095 - AluSx SINE Alu -12 300 127 534 133 0 0 chr2 56966488 56966578 -196290005 + (TG)n Simple_repeat Simple_repeat 2 91 0 216 0 0 0 chr2 56966578 56966602 -196289981 + (TA)n Simple_repeat Simple_repeat 2 25 0 844 152 8 0 chr2 56966604 56966736 -196289847 - AluSx SINE Alu -180 133 1 379 189 21 123 chr2 56967873 56968028 -196288555 + MLT1H LTR MaLR 410 547 -2 2171 132 0 3 chr2 56968213 56968517 -196288066 - AluSx SINE Alu -9 303 1 269 178 0 0 chr2 56968720 56968765 -196287818 - L2 LINE L2 -7 3306 3262 473 285 7 40 chr2 56968774 56968925 -196287658 - MIR SINE MIR -111 151 6 2204 126 0 0 chr2 56968963 56969265 -196287318 + AluSx SINE Alu 1 302 -10 22 56 0 0 chr2 56970595 56970631 -196285952 + AT_rich Low_complexity Low_complexity 1 36 0 2774 181 46 20 chr2 56970834 56971442 -196285141 - LTR27 LTR ERV1 0 636 13 237 343 49 29 chr2 56971810 56971912 -196284671 - L2 LINE L2 -30 3242 3139 1838 112 65 7 chr2 56974055 56974332 -196282251 + AluSc SINE Alu 1 293 -16 624 327 148 0 chr2 56975019 56975242 -196281341 - MIR SINE MIR -3 259 4 233 234 16 31 chr2 56975384 56975448 -196281135 + A-rich Low_complexity Low_complexity 4 66 0 5210 79 15 42 chr2 56976610 56977041 -196279542 + MER4E LTR ERV1 1 442 -324 2162 98 3 31 chr2 56977041 56977358 -196279225 - AluSp SINE Alu -2 311 4 5210 79 15 42 chr2 56977358 56977513 -196279070 + MER4E LTR ERV1 442 600 -166 2509 83 0 3 chr2 56977513 56977827 -196278756 - AluSq SINE Alu 0 313 1 5210 79 15 42 chr2 56977827 56978026 -196278557 + MER4E LTR ERV1 600 766 0 215 299 103 22 chr2 56978172 56978312 -196278271 + MIR SINE MIR 3 151 -71 247 266 47 0 chr2 56978562 56978626 -196277957 - MIR SINE MIR -34 228 162 1923 129 60 33 chr2 56979277 56979641 -196276942 - THE1C LTR MaLR -1 374 1 473 213 58 29 chr2 56979655 56979862 -196276721 - L1MCa LINE L1 -2098 4328 4116 * 565 192 34 27 chr2 56979854 56979868 -196276715 - L1MA10 LINE L1 0 6334 6321 456 261 9 66 chr2 56979868 56980001 -196276582 - L1ME1 LINE L1 -9 6157 6041 1810 127 40 37 chr2 56980001 56980301 -196276282 - AluJb SINE Alu -11 301 1 456 261 9 66 chr2 56980301 56980393 -196276190 - L1ME1 LINE L1 -125 6041 5945 1365 269 68 75 chr2 56980399 56980494 -196276089 - L1MCa LINE L1 -2286 4140 4046 8792 107 12 2 chr2 56980494 56981779 -196274804 - HSMAR2 DNA Mariner -2 1300 3 1365 269 68 75 chr2 56981779 56982033 -196274550 - L1MCa LINE L1 -2380 4046 3792 2306 67 0 7 chr2 56982033 56982345 -196274238 - AluY SINE Alu 0 310 1 1365 269 68 75 chr2 56982345 56982798 -196273785 - L1MCa LINE L1 -2634 3792 3337 882 109 0 36 chr2 56982798 56982936 -196273647 - FLAM_C SINE Alu 0 133 1 1365 269 68 75 chr2 56982936 56983607 -196272976 - L1MCa LINE L1 -3089 3337 2675 1798 151 66 3 chr2 56983607 56983925 -196272658 - MER2 DNA MER2_type 0 345 8 365 285 102 11 chr2 56984174 56984556 -196272027 - L1MCa LINE L1 -4746 1680 1264 1382 272 40 58 chr2 56984586 56985104 -196271479 + L2 LINE L2 2805 3313 0 25 0 0 0 chr2 56985375 56985400 -196271183 + AT_rich Low_complexity Low_complexity 1 25 0 206 284 142 52 chr2 56987413 56987547 -196269036 + MIR3 SINE MIR 1 146 -62 2192 114 0 3 chr2 56988426 56988723 -196267860 + AluSx SINE Alu 1 296 -16 1572 139 39 139 chr2 56989223 56989610 -196266973 + MER7A DNA MER2_type 1 346 0 1714 155 41 0 chr2 56989876 56990167 -196266416 - MER7A DNA MER2_type -11 335 35 906 96 0 0 chr2 56990167 56990320 -196266263 - AluSg/x SINE Alu 0 321 169 1592 120 0 22 chr2 56990325 56990550 -196266033 - AluSx SINE Alu -72 240 21 417 341 30 5 chr2 56990671 56990877 -196265706 - L1M4 LINE L1 -1054 5092 4882 2005 112 0 0 chr2 56990884 56991175 -196265408 - AluSx SINE Alu 0 313 23 293 87 0 43 chr2 56991177 56991223 -196265360 - AluSx SINE Alu -254 45 2 365 313 67 31 chr2 56991254 56991449 -196265134 - L1M4 LINE L1 -1302 4844 4643 5850 133 30 7 chr2 56991449 56992922 -196263661 - L1MA5A LINE L1 -4 6293 4783 699 316 97 24 chr2 56992983 56993584 -196262999 - L1M4 LINE L1 -1537 4609 3964 22 0 0 0 chr2 56994267 56994289 -196262294 + AT_rich Low_complexity Low_complexity 1 22 0 598 291 67 18 chr2 56994488 56994711 -196261872 + MIR SINE MIR 27 260 -2 302 333 57 19 chr2 56995102 56995207 -196261376 - L2 LINE L2 -19 3253 3145 429 282 77 50 chr2 56995219 56995400 -196261183 + L2 LINE L2 3017 3202 -70 287 312 138 27 chr2 56995547 56995852 -196260731 - L2 LINE L2 -212 3060 2716 698 58 0 0 chr2 56996059 56996146 -196260437 + AluY SINE Alu 211 297 -14 1919 132 26 19 chr2 56996356 56996666 -196259917 + AluJo SINE Alu 1 312 0 1874 84 72 4 chr2 56996893 56997156 -196259427 + AluSg SINE Alu 1 281 -29 1565 255 55 38 chr2 56998108 56998291 -196258292 - L1ME3A LINE L1 -7 6155 5977 1515 182 125 83 chr2 56998291 56998786 -196257797 + LTR40a LTR ERVL 1 516 -3 1565 255 55 38 chr2 56998786 56999259 -196257324 - L1ME3A LINE L1 -185 5977 5472 1997 62 0 4 chr2 56999369 56999613 -196256970 + AluY SINE Alu 53 295 -16 1145 114 0 0 chr2 56999671 56999820 -196256763 + AluSg SINE Alu 44 192 -118 646 246 87 72 chr2 57002992 57003339 -196253244 - L1ME LINE L1 -649 5515 5175 1763 138 43 3 chr2 57003339 57003495 -196253088 - AluSq SINE Alu -20 293 120 226 0 59 0 chr2 57003495 57003529 -196253054 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 1763 138 43 3 chr2 57003529 57003654 -196252929 - AluSq SINE Alu -193 120 1 646 246 87 72 chr2 57003654 57003781 -196252802 - L1ME LINE L1 -989 5175 5051 823 132 0 37 chr2 57003781 57003917 -196252666 + FLAM_C SINE Alu 3 133 0 646 246 87 72 chr2 57003917 57004064 -196252519 - L1ME LINE L1 -1113 5051 4887 337 288 137 7 chr2 57004064 57004203 -196252380 - MLT1I LTR MaLR -225 184 28 444 305 21 21 chr2 57004409 57004648 -196251935 + L1M4 LINE L1 3329 3567 -2579 1578 253 93 13 chr2 57004688 57005458 -196251125 - L2 LINE L2 0 3313 2486 752 244 114 36 chr2 57005459 57005766 -196250817 - MSTD LTR MaLR -2 394 64 4530 225 121 86 chr2 57005766 57007683 -196248900 - L2 LINE L2 -823 2491 508 216 291 13 13 chr2 57008054 57008133 -196248450 + GA-rich Low_complexity Low_complexity 4 82 0 1457 182 10 34 chr2 57009625 57009736 -196246847 + AluJo SINE Alu 1 113 -199 2434 123 73 0 chr2 57009736 57010135 -196246448 - MSTA LTR MaLR 0 428 1 1457 182 10 34 chr2 57010135 57010319 -196246264 + AluJo SINE Alu 113 289 -23 210 299 104 13 chr2 57010629 57010706 -196245877 - L2 LINE L2 -19 3253 3170 1509 81 27 5 chr2 57010707 57010929 -196245654 - LTR12 LTR ERV1 -8 706 480 295 260 10 0 chr2 57010929 57011033 -196245550 - LTR30 LTR ERV1 -79 643 539 336 78 20 0 chr2 57011033 57011084 -196245499 - LTR12 LTR ERV1 -442 272 221 * 662 56 11 0 chr2 57011074 57011164 -196245419 - LTR12 LTR ERV1 -623 91 1 429 319 92 39 chr2 57011456 57011792 -196244791 + L1MC4 LINE L1 7689 8042 0 2336 111 16 30 chr2 57011816 57012185 -196244398 - THE1B LTR MaLR 0 364 1 299 226 108 29 chr2 57012269 57012371 -196244212 + MIR SINE MIR 84 193 -69 626 249 125 0 chr2 57012387 57012588 -196243995 + MIR SINE MIR 39 262 0 281 208 30 20 chr2 57012613 57012714 -196243869 + L1 LINE L1 2664 2765 -3381 259 291 34 8 chr2 57012773 57012890 -196243693 + L1 LINE L1 2877 2996 -3150 240 283 43 0 chr2 57012890 57012982 -196243601 + L1 LINE L1 3707 3802 -2344 348 237 11 32 chr2 57013120 57013213 -196243370 - MIR SINE MIR -62 200 110 189 0 0 0 chr2 57013240 57013261 -196243322 + (TAGA)n Simple_repeat Simple_repeat 2 22 0 2531 51 0 13 chr2 57013280 57013595 -196242988 - AluY SINE Alu 0 311 1 267 310 71 18 chr2 57013595 57013708 -196242875 - MIR SINE MIR -141 121 3 182 154 26 0 chr2 57013893 57013932 -196242651 + MIR SINE MIR 209 248 -14 1735 131 28 31 chr2 57015206 57015496 -196241087 + AluJb SINE Alu 1 289 -23 416 315 33 43 chr2 57015585 57015769 -196240814 - MIR SINE MIR -19 243 62 867 163 0 7 chr2 57015799 57015934 -196240649 - AluJo SINE Alu -178 134 1 925 199 11 22 chr2 57017143 57017324 -196239259 + AluJb SINE Alu 132 310 -2 1733 171 53 115 chr2 57017765 57018390 -196238193 + LTR8A LTR ERV1 100 685 -42 249 329 42 35 chr2 57018741 57018884 -196237699 - MIR SINE MIR -12 250 107 238 169 0 102 chr2 57019427 57019486 -196237097 + L2 LINE L2 3261 3313 0 1882 151 10 3 chr2 57020150 57020449 -196236134 - AluSx SINE Alu -11 301 1 2099 126 56 34 chr2 57020709 57021065 -196235518 - THE1B LTR MaLR 0 364 1 1681 142 66 11 chr2 57021066 57021340 -196235243 + AluJb SINE Alu 23 311 -1 437 0 19 0 chr2 57023303 57023356 -196233227 + (CA)n Simple_repeat Simple_repeat 1 54 0 548 282 77 25 chr2 57023542 57023865 -196232718 - L1ME4a LINE L1 -180 5941 5602 2285 103 0 0 chr2 57024083 57024374 -196232209 + AluSg SINE Alu 1 291 -19 207 88 0 0 chr2 57024651 57024685 -196231898 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 2082 83 7 4 chr2 57024685 57024963 -196231620 - AluY SINE Alu -32 279 1 271 343 14 7 chr2 57025148 57025294 -196231289 + MER117 DNA MER1_type 12 158 -39 21 0 0 0 chr2 57025488 57025509 -196231074 + AT_rich Low_complexity Low_complexity 1 21 0 268 316 21 77 chr2 57025830 57025883 -196230700 - MIR3 SINE MIR -3 205 151 900 205 0 132 chr2 57025883 57026141 -196230442 + MER58A DNA MER1_type 1 224 0 268 316 21 77 chr2 57026141 57026275 -196230308 - MIR3 SINE MIR -57 151 31 321 375 75 0 chr2 57026481 57026601 -196229982 + L2 LINE L2 3137 3265 -7 519 331 179 8 chr2 57027131 57027533 -196229050 - L2 LINE L2 -1112 2202 1732 290 272 44 26 chr2 57027671 57027785 -196228798 + MIR SINE MIR 104 219 -43 520 234 21 21 chr2 57030067 57030208 -196226375 - MIR SINE MIR -6 256 116 269 255 19 10 chr2 57030345 57030457 -196226126 + L1ME LINE L1 5711 5824 -297 1997 88 15 0 chr2 57030503 57030764 -196225819 + AluSx SINE Alu 1 265 -47 294 280 40 0 chr2 57030935 57031060 -196225523 - MER117 DNA MER1_type -60 137 8 1096 271 200 32 chr2 57031237 57031603 -196224980 + L2 LINE L2 1615 1918 -1396 1905 181 28 3 chr2 57031603 57031957 -196224626 - MLT1A1 LTR MaLR -2 363 1 1096 271 200 32 chr2 57031957 57032240 -196224343 + L2 LINE L2 1918 2373 -941 1101 259 88 52 chr2 57032240 57032660 -196223923 + MLT1J LTR MaLR 1 435 -76 988 114 0 0 chr2 57032660 57032800 -196223783 - MER47B DNA MER2_type 0 418 279 351 148 0 0 chr2 57032816 57032870 -196223713 + AluJ/FLAM SINE Alu 37 90 -212 * 1162 204 56 0 chr2 57032869 57033100 -196223483 - MER47B DNA MER2_type -154 264 21 1249 180 34 112 chr2 57033728 57034111 -196222472 - MLT1A1 LTR MaLR -12 353 1 680 255 86 56 chr2 57034111 57034567 -196222016 + MLT1H1 LTR MaLR 52 569 -26 660 289 134 18 chr2 57037634 57037977 -196218606 + L2 LINE L2 1740 2122 -1192 700 137 0 96 chr2 57038692 57038838 -196217745 - FLAM_C SINE Alu 0 143 12 679 200 9 56 chr2 57038893 57038948 -196217635 + LTR37A LTR ERV1 197 253 -215 1294 185 42 6 chr2 57038948 57039261 -196217322 + MER33 DNA MER1_type 1 324 0 679 200 9 56 chr2 57039261 57039339 -196217244 + LTR37A LTR ERV1 253 333 -135 270 0 0 0 chr2 57039339 57039369 -196217214 + (CA)n Simple_repeat Simple_repeat 2 31 0 679 200 9 56 chr2 57039369 57039501 -196217082 + LTR37A LTR ERV1 333 449 -19 277 175 62 25 chr2 57039584 57039664 -196216919 + LTR33A LTR ERVL 440 522 -1 764 243 114 0 chr2 57039681 57039891 -196216692 - MIR SINE MIR -17 245 12 357 266 62 9 chr2 57040303 57040416 -196216167 - MIR SINE MIR -26 236 118 1810 169 3 23 chr2 57041289 57041597 -196214986 + AluJo SINE Alu 1 302 -10 407 276 6 83 chr2 57042340 57042422 -196214161 - L2 LINE L2 -12 3301 3239 1997 138 7 0 chr2 57042422 57042719 -196213864 - AluSx SINE Alu -13 299 1 407 276 6 83 chr2 57042719 57042817 -196213766 - L2 LINE L2 -74 3239 3135 203 138 0 0 chr2 57043647 57043676 -196212907 + (TCCA)n Simple_repeat Simple_repeat 1 29 0 1783 181 3 19 chr2 57043873 57044188 -196212395 + AluJo SINE Alu 1 310 -2 304 320 141 27 chr2 57044293 57044590 -196211993 + L1M4 LINE L1 4256 4586 -1560 265 317 0 10 chr2 57044759 57044863 -196211720 + L1M4 LINE L1 4741 4843 -1303 804 242 125 30 chr2 57045041 57045376 -196211207 + HAL1 LINE L1 13 379 -2128 1961 126 7 17 chr2 57045429 57045722 -196210861 - AluSx SINE Alu -22 290 1 572 324 62 0 chr2 57045738 57045948 -196210635 + HAL1 LINE L1 499 721 -1786 2374 110 0 0 chr2 57045981 57046291 -196210292 + AluSg SINE Alu 1 310 0 350 323 122 28 chr2 57046509 57046936 -196209647 + L2 LINE L2 1183 1649 -1665 1485 259 24 22 chr2 57046970 57047384 -196209199 + LTR16A LTR ERVL 25 439 -11 585 292 32 39 chr2 57047425 57047709 -196208874 - L1MC/D LINE L1 -2214 5594 5313 228 330 127 29 chr2 57047976 57048252 -196208331 + L2 LINE L2 3003 3305 -8 219 254 0 0 chr2 57048307 57048370 -196208213 + (TA)n Simple_repeat Simple_repeat 1 63 0 2754 220 72 17 chr2 57048858 57049612 -196206971 + L2 LINE L2 1803 2597 -717 542 219 73 24 chr2 57049578 57049742 -196206841 + MIR SINE MIR 70 241 -21 * 1754 152 22 4 chr2 57049743 57050019 -196206564 + AluJb SINE Alu 1 281 -31 264 30 0 0 chr2 57050884 57050917 -196205666 + (TG)n Simple_repeat Simple_repeat 2 34 0 1897 122 24 27 chr2 57054202 57054496 -196202087 - AluJo SINE Alu -19 293 1 2472 66 20 0 chr2 57054496 57054799 -196201784 - AluSc SINE Alu 0 309 1 254 288 272 8 chr2 57055426 57055551 -196201032 + MIR3 SINE MIR 3 160 -48 1520 177 53 14 chr2 57056013 57056296 -196200287 - AluJo SINE Alu -14 298 5 23 33 0 0 chr2 57056530 57056560 -196200023 + AT_rich Low_complexity Low_complexity 1 30 0 306 0 0 0 chr2 57057618 57057652 -196198931 + (A)n Simple_repeat Simple_repeat 1 34 0 295 305 11 11 chr2 57058167 57058262 -196198321 + MER5B DNA MER1_type 3 97 -81 22 0 0 0 chr2 57058292 57058314 -196198269 + AT_rich Low_complexity Low_complexity 1 22 0 2061 143 3 0 chr2 57058575 57058882 -196197701 + AluSx SINE Alu 1 308 -4 2044 222 88 168 chr2 57058952 57060329 -196196254 + L2 LINE L2 1234 2506 -807 382 194 101 39 chr2 57060329 57060458 -196196125 + L1MC5 LINE L1 7781 7917 -44 2044 222 88 168 chr2 57060458 57061206 -196195377 + L2 LINE L2 2506 3312 -1 494 270 29 34 chr2 57061377 57061581 -196195002 + L1MEc LINE L1 60 262 -6134 319 363 36 21 chr2 57061611 57061892 -196194691 + L1MEc LINE L1 252 536 -5860 1278 256 57 18 chr2 57062072 57062561 -196194022 + L1MEc LINE L1 1565 2072 -4324 327 179 1 183 chr2 57062573 57062715 -196193868 + L1ME1 LINE L1 6042 6160 -6 342 241 84 25 chr2 57062756 57062959 -196193624 + L1MEd LINE L1 895 1109 -5010 357 292 77 14 chr2 57063114 57063362 -196193221 + L1MEd LINE L1 1170 1569 -921 777 182 111 6 chr2 57063619 57063800 -196192783 + MER3 DNA MER1_type 10 209 0 225 240 0 0 chr2 57063757 57063807 -196192776 - MER3 DNA MER1_type -119 90 41 * 506 168 186 18 chr2 57064113 57064226 -196192357 - FLAM_C SINE Alu -1 132 1 2218 207 81 6 chr2 57065317 57065800 -196190783 + LTR53 LTR ERVL 1 519 0 304 367 33 0 chr2 57066857 57066977 -196189606 - L2 LINE L2 -3 3310 3187 540 235 245 30 chr2 57067000 57067200 -196189383 - MIR SINE MIR -19 243 1 201 271 116 70 chr2 57068031 57068160 -196188423 - MIR SINE MIR -118 144 10 483 96 0 0 chr2 57068744 57068817 -196187766 - L1MA5A LINE L1 -6 6291 6219 2396 90 0 0 chr2 57069401 57069702 -196186881 - AluSg SINE Alu -8 302 2 271 216 156 164 chr2 57069849 57070080 -196186503 - MIR SINE MIR -6 256 28 2047 134 0 3 chr2 57070371 57070663 -196185920 - AluSg SINE Alu -19 291 1 1965 106 75 33 chr2 57070929 57071289 -196185294 + THE1C LTR MaLR 1 375 0 9464 127 17 41 chr2 57071291 57072909 -196183674 + THE1C-int LTR MaLR 3 1580 0 1616 140 82 62 chr2 57072909 57073265 -196183318 + THE1B LTR MaLR 1 363 -1 2165 124 3 3 chr2 57073764 57074070 -196182513 - AluSq SINE Alu -6 307 2 296 226 177 16 chr2 57074442 57074566 -196182017 - MIR SINE MIR -2 260 117 206 326 78 23 chr2 57074966 57075095 -196181488 - MIR3 SINE MIR -6 202 67 2444 90 0 3 chr2 57075361 57075671 -196180912 - AluSc SINE Alu 0 309 1 776 246 85 9 chr2 57076031 57076242 -196180341 - MIR SINE MIR -22 240 14 184 212 0 0 chr2 57077813 57077846 -196178737 - L2 LINE L2 -18 3254 3222 892 254 194 10 chr2 57077864 57078250 -196178333 + L2 LINE L2 2443 2899 -415 703 148 47 40 chr2 57078269 57078418 -196178165 + MER5A DNA MER1_type 33 182 -7 508 191 9 169 chr2 57078507 57078732 -196177851 - MER5A DNA MER1_type 0 189 1 1028 267 111 6 chr2 57078746 57079105 -196177478 + L2 LINE L2 2917 3313 0 516 285 127 40 chr2 57079750 57080251 -196176332 - L2 LINE L2 -43 3270 2718 2204 95 7 13 chr2 57080251 57080555 -196176028 + AluSx SINE Alu 1 302 -10 23 33 0 0 chr2 57080855 57080885 -196175698 + AT_rich Low_complexity Low_complexity 1 30 0 324 297 110 53 chr2 57082011 57082257 -196174326 - MIR SINE MIR 0 262 3 1133 221 73 21 chr2 57082291 57082311 -196174272 - L1ME1 LINE L1 -5 6161 6144 1954 160 131 33 chr2 57082311 57082768 -196173815 - MLT1D LTR MaLR 0 505 4 1133 221 73 21 chr2 57082768 57083087 -196173496 - L1ME1 LINE L1 -22 6144 5804 422 236 123 0 chr2 57083087 57083193 -196173390 + MIR SINE MIR 70 188 -74 886 236 110 41 chr2 57083200 57083492 -196173091 - L2 LINE L2 -40 3273 2962 1308 153 9 33 chr2 57084579 57084794 -196171789 + AluJb SINE Alu 87 296 -16 1204 156 5 10 chr2 57084796 57085001 -196171582 + AluJo SINE Alu 1 204 -108 1024 179 0 6 chr2 57085477 57085639 -196170944 + FRAM SINE Alu 1 153 -23 1390 187 58 58 chr2 57085826 57086190 -196170393 + MLT1A1 LTR MaLR 1 364 -1 410 273 139 28 chr2 57086280 57086496 -196170087 + MIR SINE MIR 2 241 -21 312 267 69 20 chr2 57086591 57086692 -196169891 - L3 LINE CR1 -1294 283 178 26 50 0 0 chr2 57087095 57087135 -196169448 + AT_rich Low_complexity Low_complexity 1 40 0 518 226 136 74 chr2 57087737 57087980 -196168603 - MER112 DNA MER1_type -1 259 2 27 0 0 0 chr2 57088032 57088059 -196168524 + AT_rich Low_complexity Low_complexity 1 27 0 280 274 98 12 chr2 57089444 57089608 -196166975 + HAL1 LINE L1 1108 1285 -1222 768 224 52 60 chr2 57089612 57089751 -196166832 - MIR SINE MIR -10 252 114 3218 118 45 0 chr2 57089751 57090268 -196166315 - MER34 LTR ERV1 0 542 3 768 224 52 60 chr2 57090268 57090378 -196166205 - MIR SINE MIR -148 114 5 606 271 66 29 chr2 57090429 57090673 -196165910 + HAL1 LINE L1 1334 1586 -921 279 275 152 22 chr2 57090869 57091007 -196165576 + HAL1b LINE L1 749 904 -444 1103 314 119 18 chr2 57091067 57091631 -196164952 + L2 LINE L2 2234 2854 -460 678 311 38 38 chr2 57092459 57092774 -196163809 - HAL1 LINE L1 -2192 315 1 377 284 179 19 chr2 57092827 57092989 -196163594 + MIR SINE MIR 72 259 -3 242 212 197 0 chr2 57093130 57093196 -196163387 + L2 LINE L2 3233 3311 -2 24 77 0 0 chr2 57093307 57093359 -196163224 + AT_rich Low_complexity Low_complexity 1 52 0 2251 82 0 23 chr2 57094521 57094827 -196161756 - AluSx SINE Alu -13 299 1 968 203 130 51 chr2 57094923 57095369 -196161214 - MLT1H LTR MaLR -2 622 20 429 294 49 30 chr2 57095391 57095628 -196160955 - L1M4c LINE L1 -853 2152 1819 3743 65 38 6 chr2 57095920 57096442 -196160141 + L1PA13 LINE L1 5606 6144 -19 289 191 0 0 chr2 57096612 57096659 -196159924 + MER66A LTR ERV1 287 333 -145 1157 154 84 49 chr2 57097102 57097298 -196159285 - L1MA8 LINE L1 -8 6283 6072 1380 174 154 3 chr2 57097298 57097597 -196158986 + MER2 DNA MER2_type 1 344 0 1157 154 84 49 chr2 57097597 57097685 -196158898 - L1MA8 LINE L1 -219 6072 5989 1490 224 59 90 chr2 57097879 57098437 -196158146 - L1M4c LINE L1 -5998 544 4 409 323 96 45 chr2 57098457 57099530 -196157053 - L1M4 LINE L1 -913 5233 4106 244 311 83 28 chr2 57099618 57099972 -196156611 - HAL1b LINE L1 -806 936 700 450 167 286 40 chr2 57100008 57100134 -196156449 + MER96 DNA MER1_type? 19 175 0 585 279 136 44 chr2 57100139 57100579 -196156004 - L1ME LINE L1 -1146 1295 683 405 283 48 38 chr2 57101350 57101515 -196155068 - MIR SINE MIR -62 146 23 22 35 0 0 chr2 57102035 57102064 -196154519 + AT_rich Low_complexity Low_complexity 1 29 0 2172 81 0 39 chr2 57102249 57102556 -196154027 - AluSc SINE Alu -14 295 1 238 189 81 40 chr2 57102706 57102780 -196153803 - L1MC5 LINE L1 -50 7911 7835 1683 154 34 27 chr2 57103073 57103371 -196153212 - AluJo SINE Alu -12 300 1 25 51 0 0 chr2 57103380 57103419 -196153164 + AT_rich Low_complexity Low_complexity 1 39 0 872 178 7 0 chr2 57103912 57104058 -196152525 + FRAM SINE Alu 2 148 -18 558 143 82 10 chr2 57104151 57104249 -196152334 + FLAM_A SINE Alu 1 105 -37 354 45 0 0 chr2 57104258 57104302 -196152281 + (TAA)n Simple_repeat Simple_repeat 1 44 0 565 255 56 25 chr2 57105531 57105692 -196150891 + MIR SINE MIR 19 184 -78 432 332 79 29 chr2 57106483 57106760 -196149823 + L1MEd LINE L1 228 518 -5601 346 251 148 35 chr2 57106800 57107003 -196149580 + L1MEd LINE L1 577 802 -5317 249 315 20 47 chr2 57107044 57107193 -196149390 - HAL1 LINE L1 -1166 1341 1197 1704 157 21 0 chr2 57107228 57107515 -196149068 - AluSx SINE Alu -19 293 1 25 0 0 0 chr2 57108303 57108328 -196148255 + AT_rich Low_complexity Low_complexity 1 25 0 200 114 29 0 chr2 57108994 57109029 -196147554 + A-rich Low_complexity Low_complexity 2 37 0 349 319 108 13 chr2 57109109 57109266 -196147317 - MIR SINE MIR -30 232 61 264 224 104 45 chr2 57109502 57109636 -196146947 + L1MEd LINE L1 60 201 -5918 1085 117 6 35 chr2 57110227 57110398 -196146185 + MSTB LTR MaLR 213 378 -48 333 222 200 32 chr2 57110506 57110691 -196145892 + L1MEd LINE L1 970 1185 -4934 879 255 48 0 chr2 57110691 57110899 -196145684 + MLT1J LTR MaLR 1 218 -293 305 330 58 27 chr2 57212880 57213068 -196043515 - L2 LINE L2 -188 3084 2891 931 204 0 0 chr2 57215092 57215244 -196041339 + FRAM SINE Alu 1 152 -14 310 356 34 43 chr2 57216515 57216723 -196039860 + L2 LINE L2 2653 2858 -456 520 293 111 30 chr2 57216917 57217852 -196038731 + L1M4 LINE L1 3697 4707 -1439 884 239 107 16 chr2 57219673 57219982 -196036601 - MER46C DNA MER2_type 0 338 2 838 139 8 23 chr2 57221088 57221217 -196035366 - FLAM_C SINE Alu -16 127 1 2365 110 0 0 chr2 57222218 57222528 -196034055 - AluSq SINE Alu -1 312 3 263 273 27 27 chr2 57223333 57223443 -196033140 + MIR SINE MIR 98 207 -55 1014 155 6 12 chr2 57228570 57228738 -196027845 + AluJb SINE Alu 137 303 -9 22 0 0 0 chr2 57230025 57230047 -196026536 + AT_rich Low_complexity Low_complexity 1 22 0 240 100 0 0 chr2 57230048 57230088 -196026495 + (TG)n Simple_repeat Simple_repeat 2 41 0 24 0 0 0 chr2 57232577 57232601 -196023982 + AT_rich Low_complexity Low_complexity 1 24 0 921 199 9 69 chr2 57234668 57234884 -196021699 - MER3 DNA MER1_type 0 209 7 2088 128 0 0 chr2 57237185 57237491 -196019092 - AluSx SINE Alu 0 306 1 26 30 0 0 chr2 57239247 57239280 -196017303 + AT_rich Low_complexity Low_complexity 1 33 0 1788 143 44 0 chr2 57239465 57239737 -196016846 + AluSx SINE Alu 1 284 -28 301 150 0 0 chr2 57239697 57239738 -196016845 + Alu SINE Alu 245 320 0 295 29 0 0 chr2 57239738 57239773 -196016810 + (TAA)n Simple_repeat Simple_repeat 3 180 0 1657 184 0 14 chr2 57243399 57243687 -196012896 + AluJo SINE Alu 12 295 -17 785 219 66 0 chr2 57246515 57246698 -196009885 - MER58A DNA MER1_type -12 212 18 269 286 31 43 chr2 57247914 57248075 -196008508 - Charlie7 DNA MER1_type 0 2612 2454 1117 274 152 13 chr2 57248179 57248712 -196007871 - L1MC4a LINE L1 -1911 5897 5291 225 0 0 0 chr2 57248712 57248737 -196007846 + (TTTC)n Simple_repeat Simple_repeat 2 26 0 613 282 31 68 chr2 57248848 57249246 -196007337 + L1M1 LINE L1 730 1790 -5775 531 249 199 20 chr2 57249474 57249844 -196006739 - Charlie7 DNA MER1_type -399 2213 1701 318 288 8 30 chr2 57252932 57253064 -196003519 - MIR SINE MIR 0 262 134 1243 181 68 26 chr2 57253959 57254269 -196002314 + MER33 DNA MER1_type 1 323 -1 211 250 25 17 chr2 57256409 57256481 -196000102 + CT-rich Low_complexity Low_complexity 1 121 0 212 297 120 9 chr2 57261647 57261774 -195994809 - MIR SINE MIR -55 153 12 227 276 52 0 chr2 57261959 57262017 -195994566 + MER91 DNA MER1_type 130 190 0 24 0 0 0 chr2 57265230 57265254 -195991329 + AT_rich Low_complexity Low_complexity 1 24 0 1299 195 72 60 chr2 57266489 57266823 -195989760 - MER58B DNA MER1_type -1 340 3 546 171 117 78 chr2 57267958 57268163 -195988420 - L1MC5 LINE L1 -820 7141 6929 1604 214 148 45 chr2 57268442 57269102 -195987481 - L1MD2 LINE L1 0 6359 5632 252 0 0 0 chr2 57269321 57269349 -195987234 + (TG)n Simple_repeat Simple_repeat 2 29 0 225 0 0 0 chr2 57269612 57269637 -195986946 + (TG)n Simple_repeat Simple_repeat 1 25 0 2236 87 0 7 chr2 57270691 57270978 -195985605 + AluSg SINE Alu 1 285 -25 303 271 17 68 chr2 57272441 57272559 -195984024 - MIR SINE MIR -4 258 147 340 284 200 11 chr2 57273005 57273195 -195983388 - MIR SINE MIR -36 226 1 252 186 0 0 chr2 57273615 57273674 -195982909 + GA-rich Low_complexity Low_complexity 1 59 0 22 0 0 0 chr2 57274633 57274655 -195981928 + AT_rich Low_complexity Low_complexity 1 22 0 1926 147 10 3 chr2 57274762 57275055 -195981528 + AluSx SINE Alu 1 295 -17 2519 166 87 42 chr2 57275855 57275993 -195980590 - MER6A DNA MER2_type -260 605 475 2385 86 0 0 chr2 57275993 57276285 -195980298 + AluSg SINE Alu 1 292 -18 2519 166 87 42 chr2 57276285 57276724 -195979859 - MER6A DNA MER2_type -390 475 2 724 162 101 27 chr2 57276821 57277126 -195979457 - AluJb SINE Alu 0 312 144 927 268 94 48 chr2 57277172 57277587 -195978996 - LTR67 LTR ERVL -10 547 114 2182 181 46 44 chr2 57277674 57278050 -195978533 - MLT1D LTR MaLR 0 505 126 1688 129 123 26 chr2 57278050 57278392 -195978191 + THE1C LTR MaLR 1 375 0 2182 181 46 44 chr2 57278392 57278519 -195978064 - MLT1D LTR MaLR -379 126 1 2411 110 0 0 chr2 57278959 57279269 -195977314 - AluSx SINE Alu -2 310 1 296 232 10 101 chr2 57279390 57279489 -195977094 + L2 LINE L2 3182 3271 -1 2773 223 62 23 chr2 57280788 57281742 -195974841 + L1MC4 LINE L1 7004 8040 -2 854 147 5 27 chr2 57281955 57282139 -195974444 + CT-rich Low_complexity Low_complexity 1 180 0 1997 133 10 13 chr2 57282139 57282546 -195974037 - AluSq SINE Alu 0 406 1 759 160 53 77 chr2 57282918 57283087 -195973496 + MER69A DNA AcHobo 1 165 -12 1989 117 10 20 chr2 57283310 57283608 -195972975 - AluSg SINE Alu -15 295 1 266 253 74 0 chr2 57284194 57284289 -195972294 - L2 LINE L2 -5 3267 3166 755 181 7 0 chr2 57284597 57284741 -195971842 - AluJb SINE Alu -2 310 166 474 224 109 0 chr2 57287093 57287240 -195969343 - L1MC4a LINE L1 -1845 5963 5801 22 35 0 0 chr2 57287541 57287570 -195969013 + AT_rich Low_complexity Low_complexity 1 29 0 2342 104 0 0 chr2 57287570 57287869 -195968714 + AluSg SINE Alu 1 299 -11 359 237 227 77 chr2 57288432 57288672 -195967911 - MLT1H1 LTR MaLR -4 550 347 2048 209 24 21 chr2 57288672 57289094 -195967489 + MSTB LTR MaLR 4 426 0 359 237 227 77 chr2 57289094 57289228 -195967355 - MLT1H1 LTR MaLR -207 347 115 902 145 0 0 chr2 57289431 57289562 -195967021 + FLAM_A SINE Alu 1 131 -2 885 75 0 9 chr2 57289578 57289793 -195966790 - AluY SINE Alu -6 305 2 21935 143 22 26 chr2 57290516 57291329 -195965254 + L1MA3 LINE L1 10 825 -6899 2598 60 0 10 chr2 57291329 57291643 -195964940 - AluY SINE Alu 0 311 1 21935 143 22 26 chr2 57291643 57293094 -195963489 + L1MA3 LINE L1 825 2281 -5443 2050 112 11 4 chr2 57293094 57293396 -195963187 + AluSc SINE Alu 1 304 0 21935 143 22 26 chr2 57293396 57294934 -195961649 + L1MA3 LINE L1 2281 3824 -3900 279 0 0 0 chr2 57294934 57294965 -195961618 + (TCTCCC)n Simple_repeat Simple_repeat 3 33 0 7152 60 13 9 chr2 57294965 57296372 -195960211 + SVA Other Other 53 1386 0 21935 143 22 26 chr2 57296372 57300207 -195956376 + L1MA3 LINE L1 3822 7618 -106 416 96 0 108 chr2 57300384 57300467 -195956116 + MADE1 DNA Mariner 1 74 -6 395 68 14 68 chr2 57300440 57300514 -195956069 + MADE1 DNA Mariner 11 80 0 * 569 233 201 11 chr2 57300846 57301035 -195955548 - MIR SINE MIR -1 261 37 287 291 12 0 chr2 57301869 57301955 -195954628 + L2 LINE L2 3224 3310 -3 2241 94 7 10 chr2 57302210 57302509 -195954074 - AluSg SINE Alu -12 298 1 2155 125 0 10 chr2 57302720 57303031 -195953552 - AluSc SINE Alu -1 308 1 489 338 49 4 chr2 57303143 57303368 -195953215 + MIR SINE MIR 15 249 -13 877 174 29 23 chr2 57303371 57303543 -195953040 + MER45A DNA AcHobo 5 177 -1 389 183 12 0 chr2 57303710 57303792 -195952791 - L1MB8 LINE L1 -12 6166 6084 2270 111 0 7 chr2 57303820 57304117 -195952466 - AluSq SINE Alu -18 295 1 460 307 36 17 chr2 57304278 57304474 -195952109 - MIR3 SINE MIR -12 196 1 21 0 0 0 chr2 57305060 57305081 -195951502 + AT_rich Low_complexity Low_complexity 1 21 0 249 211 84 21 chr2 57305091 57305186 -195951397 + MER52A LTR ERV1 1 101 -1654 7606 162 137 20 chr2 57305629 57307151 -195949432 + MER52A LTR ERV1 55 1755 0 655 295 40 22 chr2 57307151 57307378 -195949205 - MIR SINE MIR -29 233 3 21 57 0 0 chr2 57307442 57307477 -195949106 + AT_rich Low_complexity Low_complexity 1 35 0 1263 235 45 49 chr2 57307710 57308242 -195948341 - L1MC5 LINE L1 -59 7902 7373 434 295 76 12 chr2 57308365 57308805 -195947778 - L1MC5 LINE L1 -743 5403 4965 509 200 48 0 chr2 57309448 57309553 -195947030 - Zaphod DNA AcHobo 0 4031 3922 2383 102 0 0 chr2 57309565 57309870 -195946713 + AluSx SINE Alu 1 305 -7 788 265 113 58 chr2 57309900 57310191 -195946392 - MER115 DNA AcHobo -297 396 90 872 203 16 16 chr2 57310214 57310406 -195946177 - MIR SINE MIR -54 208 17 182 255 39 0 chr2 57310564 57310615 -195945968 + MIR3 SINE MIR 149 201 -7 37 30 0 30 chr2 57310693 57310727 -195945856 + AT_rich Low_complexity Low_complexity 1 34 -30 1992 157 0 0 chr2 57310727 57311014 -195945569 - AluSx SINE Alu -25 287 1 37 30 0 30 chr2 57311014 57311045 -195945538 + AT_rich Low_complexity Low_complexity 34 64 0 3777 146 58 79 chr2 57312288 57312598 -195943985 - L1MB8 LINE L1 -1 6177 5862 1742 96 0 0 chr2 57312598 57312817 -195943766 - AluSg/x SINE Alu -3 307 89 3777 146 58 79 chr2 57312817 57313389 -195943194 - L1MB8 LINE L1 -316 5862 5314 354 115 0 0 chr2 57313570 57313622 -195942961 - Alu SINE Alu -3 305 254 545 156 0 0 chr2 57313623 57313713 -195942870 + AluJ/FRAM SINE Alu 220 309 -3 1262 298 52 5 chr2 57313747 57314150 -195942433 + MLT1J LTR MaLR 90 511 0 742 208 53 44 chr2 57314162 57314388 -195942195 - HAL1b LINE L1 -778 570 343 378 261 98 101 chr2 57314414 57315127 -195941456 - L1MC4 LINE L1 -72 7970 7243 1383 110 0 41 chr2 57315194 57315412 -195941171 + Tigger2a DNA MER2_type 1 209 -225 1594 119 12 20 chr2 57315428 57315672 -195940911 - THE1B LTR MaLR -122 242 1 612 236 94 11 chr2 57316525 57316716 -195939867 + MIR SINE MIR 4 210 -52 995 252 95 76 chr2 57316740 57316873 -195939710 + MLT1J LTR MaLR 59 188 -323 1747 161 27 3 chr2 57316873 57317165 -195939418 - AluJb SINE Alu -13 299 1 995 252 95 76 chr2 57317165 57317464 -195939119 + MLT1J LTR MaLR 188 499 -12 958 183 43 43 chr2 57317494 57317724 -195938859 + MIR SINE MIR 12 241 -21 391 281 114 48 chr2 57317856 57318066 -195938517 - MIR SINE MIR 0 262 39 1907 116 19 0 chr2 57318621 57318880 -195937703 + AluSx SINE Alu 1 264 -48 182 37 37 0 chr2 57318894 57318921 -195937662 + (CAAAA)n Simple_repeat Simple_repeat 1 28 0 211 135 27 0 chr2 57321314 57321351 -195935232 - SUBTEL_sa Satellite Satellite -126 48 11 37 0 0 0 chr2 57321564 57321601 -195934982 + GC_rich Low_complexity Low_complexity 1 37 0 445 324 83 5 chr2 57325040 57325256 -195931327 + MIR SINE MIR 20 252 -10 260 286 60 65 chr2 57325528 57325713 -195930870 + MIR SINE MIR 6 189 -73 462 354 14 5 chr2 57325986 57326195 -195930388 - MIR SINE MIR -21 241 31 1413 223 0 3 chr2 57326427 57326710 -195929873 + AluJb SINE Alu 26 307 -5 25 0 0 0 chr2 57326771 57326796 -195929787 + AT_rich Low_complexity Low_complexity 1 25 0 189 297 155 26 chr2 57327002 57327157 -195929426 - MIR SINE MIR -6 256 82 706 281 103 19 chr2 57327354 57327674 -195928909 - L2 LINE L2 0 3313 2967 1461 155 103 4 chr2 57327919 57328171 -195928412 + AluJo SINE Alu 14 290 -22 2720 165 29 8 chr2 57328412 57329125 -195927458 - L1M4 LINE L1 -586 5598 4871 2168 123 3 0 chr2 57330605 57330898 -195925685 + AluSx SINE Alu 1 294 -18 199 386 70 4 chr2 57331478 57331737 -195924846 + L2 LINE L2 2808 3083 -189 242 301 59 50 chr2 57332466 57332685 -195923898 - L2 LINE L2 -221 3051 2831 346 237 0 0 chr2 57332945 57333021 -195923562 + MIR SINE MIR 65 140 -68 1544 236 43 7 chr2 57333383 57333803 -195922780 + L1MC4 LINE L1 7462 7896 -146 1847 104 0 0 chr2 57333841 57334082 -195922501 - AluSg/x SINE Alu -6 306 66 853 263 101 51 chr2 57334191 57334816 -195921767 + L2 LINE L2 2638 3313 0 315 123 123 0 chr2 57334886 57334943 -195921640 - Charlie4a DNA MER1_type -14 494 431 1723 222 137 18 chr2 57334959 57335508 -195921075 - L1ME3A LINE L1 -1 6169 5556 612 128 0 0 chr2 57335510 57335596 -195920987 + AluS SINE Alu 2 87 -225 1388 202 65 35 chr2 57335623 57336054 -195920529 - Charlie4a DNA MER1_type -63 445 2 354 275 61 93 chr2 57336070 57336317 -195920266 - L2 LINE L2 -11 3261 3023 588 263 167 51 chr2 57336471 57337022 -195919561 - L2 LINE L2 -806 2508 1894 23 33 0 0 chr2 57337487 57337517 -195919066 + AT_rich Low_complexity Low_complexity 1 30 0 250 282 82 59 chr2 57337732 57337902 -195918681 + L2 LINE L2 2556 2729 -585 * 357 191 34 22 chr2 57337874 57337963 -195918620 - MER5A DNA MER1_type -50 139 50 2372 215 157 3 chr2 57337963 57338624 -195917959 + L1MC4 LINE L1 6648 7410 -632 205 308 15 15 chr2 57339178 57339243 -195917340 + MIR SINE MIR 20 84 -178 3263 158 52 7 chr2 57339401 57339978 -195916605 - MER6A DNA MER2_type -2 603 1 187 292 77 0 chr2 57340057 57340122 -195916461 - MIR SINE MIR -173 89 20 314 190 63 92 chr2 57340212 57340354 -195916229 - Charlie7 DNA MER1_type -2 2610 2473 202 250 23 45 chr2 57341262 57341350 -195915233 - L2 LINE L2 -925 2389 2304 593 27 13 0 chr2 57341438 57341513 -195915070 + (CA)n Simple_repeat Simple_repeat 2 77 0 1643 199 0 14 chr2 57342044 57342341 -195914242 + AluJo SINE Alu 1 293 -19 208 312 108 32 chr2 57344960 57345053 -195911530 + L2 LINE L2 3169 3268 -4 1570 184 7 18 chr2 57345130 57345412 -195911171 - AluJo SINE Alu -33 279 1 442 265 97 31 chr2 57345466 57345662 -195910921 - L1MC/D LINE L1 -2050 5758 5550 24 67 0 0 chr2 57345877 57345922 -195910661 + AT_rich Low_complexity Low_complexity 1 45 0 777 241 48 0 chr2 57346138 57346325 -195910258 - MIR SINE MIR -26 236 41 587 282 87 89 chr2 57346983 57347546 -195909037 - MLT1K LTR MaLR -16 572 11 1653 235 89 72 chr2 57348848 57349229 -195907354 - L1ME3A LINE L1 -5 6099 5726 239 139 0 0 chr2 57349229 57349265 -195907318 - U2 snRNA snRNA -152 36 1 1653 235 89 72 chr2 57349265 57349348 -195907235 - L1ME3A LINE L1 -378 5726 5646 1681 101 0 0 chr2 57349348 57349565 -195907018 - AluSg/x SINE Alu -22 288 72 1653 235 89 72 chr2 57349565 57349825 -195906758 - L1ME3A LINE L1 -458 5646 5326 1573 171 29 66 chr2 57349830 57350210 -195906373 + MLT1D LTR MaLR 5 370 -135 1661 161 0 75 chr2 57350212 57350404 -195906179 - AluJo SINE Alu -11 301 141 2310 93 0 0 chr2 57350404 57350695 -195905888 + AluSg SINE Alu 1 291 -19 1661 161 0 75 chr2 57350695 57350824 -195905759 - AluJo SINE Alu -171 141 4 732 167 14 21 chr2 57351007 57351151 -195905432 + MLT1D LTR MaLR 363 505 0 2484 232 81 29 chr2 57351151 57351508 -195905075 - L1ME3A LINE L1 -751 5329 4992 923 184 48 34 chr2 57351508 57351714 -195904869 + MER3 DNA MER1_type 1 209 0 2484 232 81 29 chr2 57351714 57352374 -195904209 - L1ME3A LINE L1 -1088 4992 4259 1430 136 5 0 chr2 57352374 57352587 -195903996 - AluJb SINE Alu -15 297 84 269 279 19 19 chr2 57352962 57353066 -195903517 - L1ME3A LINE L1 -5924 146 43 1080 253 163 70 chr2 57353447 57354726 -195901857 - HAL1 LINE L1 -1076 1431 34 524 391 50 20 chr2 57355123 57355466 -195901117 + L2 LINE L2 2916 3268 -4 181 135 39 0 chr2 57356591 57356643 -195899940 + (TA)n Simple_repeat Simple_repeat 2 55 0 252 278 201 0 chr2 57357119 57357263 -195899320 - L1MC/D LINE L1 -2048 5760 5588 207 0 0 0 chr2 57357543 57357566 -195899017 + (T)n Simple_repeat Simple_repeat 1 23 0 3515 230 103 49 chr2 57358451 57360213 -195896370 - L1MC4 LINE L1 -3 8039 6088 2197 83 3 3 chr2 57362172 57362462 -195894121 - AluY SINE Alu -3 308 19 2950 163 74 102 chr2 57362578 57363489 -195893094 - L1MD2 LINE L1 0 8042 6241 408 40 0 0 chr2 57364318 57364368 -195892215 + (TG)n Simple_repeat Simple_repeat 2 51 0 342 90 0 2 chr2 57364392 57364448 -195892135 - FLAM SINE Alu -1 132 84 971 167 151 11 chr2 57364449 57364635 -195891948 - AluJo SINE Alu -95 217 6 434 297 81 7 chr2 57365321 57365490 -195891093 + MIR3 SINE MIR 8 194 -14 1347 229 19 19 chr2 57366280 57366643 -195889940 - L1MA10 LINE L1 -3 6331 5969 422 141 253 0 chr2 57366954 57367053 -195889530 + MER94 DNA DNA 11 134 0 605 333 88 6 chr2 57367280 57367610 -195888973 + L2 LINE L2 1787 2143 -1171 421 272 65 71 chr2 57367657 57367841 -195888742 - L2 LINE L2 -887 2427 2245 297 362 69 9 chr2 57368855 57368971 -195887612 - L2 LINE L2 -9 3263 3141 407 282 179 10 chr2 57369299 57369494 -195887089 - MIR SINE MIR -10 252 25 228 286 63 16 chr2 57370573 57370636 -195885947 + MIR SINE MIR 14 79 -183 804 167 202 31 chr2 57370659 57370887 -195885696 - MLT1J LTR MaLR -153 358 92 264 216 147 49 chr2 57370923 57371025 -195885558 - LTR16A LTR ERVL -6 444 333 479 279 77 11 chr2 57371043 57371226 -195885357 - LTR16A LTR ERVL -230 220 26 309 284 0 11 chr2 57371280 57371368 -195885215 + MIR SINE MIR 159 245 -17 1394 274 83 17 chr2 57371781 57372462 -195884121 + L2 LINE L2 2593 3313 0 241 226 130 90 chr2 57372608 57372785 -195883798 - L1M4 LINE L1 -2304 3842 3659 1234 91 0 32 chr2 57372823 57373009 -195883574 - MER107 DNA MER1_type -7 190 11 367 238 0 0 chr2 57373329 57373413 -195883170 + L1PA16 LINE L1 6059 6142 -24 202 184 61 0 chr2 57375051 57375100 -195881483 + GA-rich Low_complexity Low_complexity 2 53 0 2348 93 0 13 chr2 57375325 57375638 -195880945 + AluY SINE Alu 1 309 -2 27 29 0 0 chr2 57375646 57375680 -195880903 + AT_rich Low_complexity Low_complexity 1 34 0 2352 90 0 23 chr2 57375975 57376285 -195880298 + AluSq SINE Alu 1 303 -10 1833 173 20 0 chr2 57376297 57376603 -195879980 + AluJb SINE Alu 1 312 0 206 216 0 0 chr2 57376610 57376647 -195879936 + polypurine Low_complexity Low_complexity 4 40 0 594 199 129 27 chr2 57377770 57377956 -195878627 - MIR SINE MIR 0 262 58 1844 160 7 3 chr2 57378393 57378686 -195877897 - AluJb SINE Alu -16 296 3 376 347 126 9 chr2 57379507 57379729 -195876854 + MIR SINE MIR 15 262 0 322 319 80 70 chr2 57380607 57380677 -195875906 - L1ME LINE L1 -297 5824 5756 1643 184 21 10 chr2 57380677 57380965 -195875618 - AluJo SINE Alu -21 291 1 322 319 80 70 chr2 57380965 57381208 -195875375 - L1ME LINE L1 -365 5756 5508 983 143 11 26 chr2 57381227 57381416 -195875167 - Tigger2 DNA MER2_type -14 2704 2519 563 77 250 0 chr2 57381416 57381520 -195875063 - L1PA10 LINE L1 -1 6167 6038 255 58 58 0 chr2 57381526 57381578 -195875005 - Tigger2 DNA MER2_type -194 2524 2470 1205 140 0 28 chr2 57381654 57381868 -195874715 - Tigger2 DNA MER2_type -1974 744 537 2046 119 3 26 chr2 57381890 57382202 -195874381 - AluSx SINE Alu -7 305 1 2231 154 70 5 chr2 57382204 57382645 -195873938 - Tigger2 DNA MER2_type -2248 470 1 192 40 0 0 chr2 57382645 57382670 -195873913 + (TA)n Simple_repeat Simple_repeat 2 26 0 241 273 171 0 chr2 57383094 57383182 -195873401 - LTR67 LTR ERVL -53 504 402 693 249 102 10 chr2 57384098 57384325 -195872258 + MIR SINE MIR 11 257 -5 1998 194 35 38 chr2 57384537 57385088 -195871495 - MER73 LTR ERVL 0 644 96 1025 167 70 4 chr2 57385086 57385314 -195871269 - MER54A LTR ERVL -652 249 7 * 2660 35 0 6 chr2 57385952 57386265 -195870318 + AluY SINE Alu 1 311 0 427 268 196 28 chr2 57386370 57386549 -195870034 - MIR SINE MIR -31 231 23 2674 39 0 0 chr2 57387440 57387746 -195868837 - AluY SINE Alu -5 306 1 481 272 34 27 chr2 57388498 57388645 -195867938 + MIR3 SINE MIR 50 197 -11 427 238 66 16 chr2 57389140 57389268 -195867315 + L1ME1 LINE L1 5605 5738 -446 * 609 208 40 0 chr2 57389260 57389409 -195867174 + L1ME1 LINE L1 6011 6165 -1 1756 181 10 0 chr2 57389707 57389995 -195866588 + AluSx SINE Alu 1 291 -21 365 223 165 69 chr2 57390304 57390564 -195866019 + MLT1J LTR MaLR 1 285 -226 432 302 89 30 chr2 57390742 57390977 -195865606 - MIR SINE MIR -1 261 13 1300 176 75 38 chr2 57391854 57392201 -195864382 - THE1C LTR MaLR -6 369 10 2054 91 4 7 chr2 57393635 57393911 -195862672 + AluY SINE Alu 32 306 -5 323 248 0 59 chr2 57393914 57394015 -195862568 - MER5A DNA MER1_type -86 103 9 823 140 200 20 chr2 57394185 57394385 -195862198 - Tigger1 DNA MER2_type 0 2418 2183 448 280 0 0 chr2 57394442 57394542 -195862041 + MIR SINE MIR 9 108 -154 2273 234 66 44 chr2 57394542 57394890 -195861693 - L1M4 LINE L1 -1326 4820 4481 2199 109 0 7 chr2 57394890 57395194 -195861389 - AluSg SINE Alu -8 302 1 2273 234 66 44 chr2 57395194 57395782 -195860801 - L1M4 LINE L1 -1665 4481 3863 2220 118 0 0 chr2 57395793 57396082 -195860501 - AluSx SINE Alu -23 289 1 1907 104 4 0 chr2 57396113 57396364 -195860219 - AluSc SINE Alu -57 252 1 612 211 18 0 chr2 57396368 57396482 -195860101 + MER58B DNA MER1_type 225 340 -1 1179 197 61 123 chr2 57396745 57397017 -195859566 + MER21B LTR ERV1 324 611 -252 1794 151 25 4 chr2 57397017 57397295 -195859288 + AluJo SINE Alu 1 284 -28 1179 197 61 123 chr2 57397295 57397443 -195859140 + MER21B LTR ERV1 611 716 -147 1950 140 20 60 chr2 57397443 57397794 -195858789 + MER1B DNA MER1_type 1 337 0 1179 197 61 123 chr2 57397794 57397828 -195858755 + MER21B LTR ERV1 716 751 -112 1583 171 4 0 chr2 57397954 57398234 -195858349 - L1 LINE L1 -1839 4307 4027 8955 116 5 7 chr2 57399156 57400588 -195855995 - L1P3 LINE L1 -3554 2907 1488 5951 39 9 4 chr2 57400713 57401715 -195854868 + L1PA4 LINE L1 4969 5972 -183 612 27 0 0 chr2 57402489 57402563 -195854020 + (GA)n Simple_repeat Simple_repeat 1 74 0 419 206 79 85 chr2 57403428 57403548 -195853035 - L3 LINE CR1 -103 1474 1354 2187 113 3 7 chr2 57403548 57403850 -195852733 + AluSx SINE Alu 1 301 -11 419 206 79 85 chr2 57403850 57403894 -195852689 - L3 LINE CR1 -223 1354 1311 270 280 30 53 chr2 57404130 57404262 -195852321 - MER5B DNA MER1_type -49 129 1 203 303 217 0 chr2 57404376 57404528 -195852055 - MIR SINE MIR -2 260 76 2156 115 0 13 chr2 57405243 57405548 -195851035 - AluSq SINE Alu -7 306 6 22 25 0 25 chr2 57406514 57406541 -195850042 + AT_rich Low_complexity Low_complexity 1 28 -11 2357 93 0 0 chr2 57406541 57406830 -195849753 + AluSx SINE Alu 1 289 -23 22 25 0 25 chr2 57406830 57406842 -195849741 + AT_rich Low_complexity Low_complexity 28 39 0 662 285 6 0 chr2 57407828 57408000 -195848583 + MIR SINE MIR 57 229 -33 442 242 86 13 chr2 57408507 57408775 -195847808 + L1P4 LINE L1 5173 5461 -704 231 302 45 70 chr2 57409507 57409749 -195846834 + L3 LINE CR1 1342 1577 0 208 158 26 0 chr2 57410292 57410330 -195846253 + (TG)n Simple_repeat Simple_repeat 2 40 0 262 185 62 0 chr2 57410358 57410423 -195846160 - HsTC2 DNA Tc2 -1801 97 29 325 236 94 47 chr2 57411359 57411465 -195845118 + MIR SINE MIR 30 140 -68 576 126 117 18 chr2 57411994 57412105 -195844478 + FLAM_C SINE Alu 12 133 -10 233 283 0 0 chr2 57412145 57412205 -195844378 - MIR SINE MIR -156 106 47 397 261 120 48 chr2 57412554 57412718 -195843865 + L1ME4a LINE L1 5764 5915 -206 2522 70 0 16 chr2 57412718 57413033 -195843550 + AluY SINE Alu 1 310 -1 397 261 120 48 chr2 57413033 57413201 -195843382 + L1ME4a LINE L1 5915 6120 -1 5309 215 45 11 chr2 57414166 57414727 -195841856 + L1MB7 LINE L1 3648 4189 -1957 4397 157 63 30 chr2 57414727 57414893 -195841690 - MER6 DNA MER2_type 0 865 706 2066 130 17 0 chr2 57414893 57415186 -195841397 + AluSx SINE Alu 1 298 -14 4397 157 63 30 chr2 57415186 57415498 -195841085 - MER6 DNA MER2_type -159 706 406 222 37 0 0 chr2 57415498 57415525 -195841058 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 4397 157 63 30 chr2 57415525 57415882 -195840701 - MER6 DNA MER2_type -459 406 1 5309 215 45 11 chr2 57415882 57416667 -195839916 + L1MB7 LINE L1 4189 5039 -1107 687 253 35 17 chr2 57416676 57416850 -195839733 - AluJb SINE Alu -1 311 135 3607 146 60 23 chr2 57416851 57417619 -195838964 + L1MB7 LINE L1 5031 5834 -350 1503 186 46 12 chr2 57417619 57417947 -195838636 + MER44D DNA MER2_type 1 609 0 3607 146 60 23 chr2 57417947 57418067 -195838516 + L1MB7 LINE L1 5834 5948 -236 2189 103 0 42 chr2 57420046 57420358 -195836225 - AluSx SINE Alu -13 299 1 237 263 88 82 chr2 57422080 57422274 -195834309 + MIR SINE MIR 49 243 -19 335 252 201 0 chr2 57427362 57427501 -195829082 - MIR SINE MIR 0 262 96 421 232 210 65 chr2 57427901 57427974 -195828609 - L2 LINE L2 0 3313 3252 5563 64 10 0 chr2 57427974 57428657 -195827926 - LTR8 LTR ERV1 -1 690 1 421 232 210 65 chr2 57428657 57428936 -195827647 - L2 LINE L2 -61 3252 2910 786 217 6 0 chr2 57429178 57429344 -195827239 - MER5A DNA MER1_type -21 168 2 1814 121 97 0 chr2 57430308 57430598 -195825985 - MER1B DNA MER1_type -21 318 1 2271 90 0 3 chr2 57437029 57437317 -195819266 - AluSq SINE Alu -26 287 1 750 222 124 16 chr2 57438218 57438412 -195818171 - MER58C DNA MER1_type 0 215 1 2273 114 0 3 chr2 57441377 57441683 -195814900 + AluSx SINE Alu 1 305 -7 1829 141 10 33 chr2 57442282 57442587 -195813996 - AluJo SINE Alu -14 298 1 2348 82 3 7 chr2 57445192 57445485 -195811098 - AluSp SINE Alu -21 292 1 552 239 200 34 chr2 57446079 57446284 -195810299 + MIR SINE MIR 20 258 -4 306 0 0 0 chr2 57446551 57446585 -195809998 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 377 265 83 15 chr2 57447031 57447163 -195809420 + MIR3 SINE MIR 68 208 0 1357 75 0 0 chr2 57448138 57448298 -195808285 + AluSg/x SINE Alu 99 258 -54 212 256 0 0 chr2 57448473 57448516 -195808067 + (CATA)n Simple_repeat Simple_repeat 1 43 0 2344 84 17 0 chr2 57449116 57449414 -195807169 + AluY SINE Alu 1 303 -8 489 221 25 33 chr2 57450127 57450249 -195806334 - L2 LINE L2 0 3313 3193 1756 131 40 11 chr2 57450424 57450699 -195805884 + AluJb SINE Alu 1 283 -29 465 19 0 0 chr2 57450699 57450753 -195805830 + (CTA)n Simple_repeat Simple_repeat 3 56 0 326 278 82 21 chr2 57452762 57452956 -195803627 - HAL1 LINE L1 -56 2451 2246 1378 235 59 10 chr2 57453160 57453564 -195803019 - L1ME1 LINE L1 -285 5881 5458 1308 207 113 28 chr2 57453570 57454111 -195802472 - L1ME1 LINE L1 -805 5341 4755 314 295 0 11 chr2 57454160 57454255 -195802328 + L1MC4 LINE L1 6635 6728 -1314 2369 93 6 6 chr2 57454399 57454712 -195801871 + AluSq SINE Alu 1 313 0 520 199 61 72 chr2 57454782 57454963 -195801620 - MIR SINE MIR -2 260 82 2549 187 89 101 chr2 57455004 57455945 -195800638 + MER63C DNA MER1_type 1 930 0 29 28 0 0 chr2 57457758 57457794 -195798789 + AT_rich Low_complexity Low_complexity 1 36 0 261 304 107 0 chr2 57458778 57458890 -195797693 - L2 LINE L2 0 3313 3190 202 353 150 8 chr2 57459599 57459732 -195796851 + L2 LINE L2 3121 3272 0 495 286 154 18 chr2 57460167 57460394 -195796189 - MIR SINE MIR -1 261 4 294 244 47 63 chr2 57463979 57464106 -195792477 - MIR SINE MIR -50 212 88 1120 91 219 0 chr2 57465631 57465818 -195790765 + MER30 DNA MER1_type 2 229 -1 225 204 20 20 chr2 57466044 57466093 -195790490 - MER5B DNA MER1_type 0 178 130 711 225 133 58 chr2 57466351 57466698 -195789885 + MER57A LTR ERV1 1 373 -30 186 319 160 0 chr2 57467059 57467178 -195789405 - MIR SINE MIR -55 207 70 324 335 18 18 chr2 57467317 57467481 -195789102 + MER5A DNA MER1_type 1 164 -25 2344 79 10 3 chr2 57467572 57467876 -195788707 + AluSc SINE Alu 1 306 -3 407 313 109 24 chr2 57469867 57470206 -195786377 + L1ME4a LINE L1 4963 5330 -816 500 275 39 16 chr2 57470321 57470503 -195786080 + L1ME4a LINE L1 5496 5681 -440 249 247 134 0 chr2 57470567 57470687 -195785896 + L1ME4a LINE L1 5719 5861 -260 225 262 48 0 chr2 57470772 57470856 -195785727 + L1ME4a LINE L1 5952 6039 -82 648 36 0 0 chr2 57471920 57472003 -195784580 + (TC)n Simple_repeat Simple_repeat 1 83 0 183 287 103 0 chr2 57472094 57472173 -195784410 - MIR SINE MIR -109 99 13 202 135 27 0 chr2 57472881 57472918 -195783665 + MIR3 SINE MIR 152 189 -19 1022 152 38 0 chr2 57473507 57473665 -195782918 - AluJb SINE Alu -148 164 1 1789 114 0 4 chr2 57474456 57474702 -195781881 + AluSx SINE Alu 38 282 -30 1807 142 0 0 chr2 57474993 57475247 -195781336 + AluSx SINE Alu 1 254 -58 307 218 51 13 chr2 57475265 57475343 -195781240 + L1ME4a LINE L1 6041 6121 0 217 215 62 31 chr2 57476139 57476204 -195780379 - MER5A DNA MER1_type -6 183 117 21 36 0 0 chr2 57477166 57477194 -195779389 + AT_rich Low_complexity Low_complexity 1 28 0 215 222 0 56 chr2 57477724 57477778 -195778805 + MER91 DNA MER1_type 140 190 -6 475 266 96 30 chr2 57477969 57478168 -195778415 + MIR SINE MIR 5 216 -46 443 241 200 5 chr2 57481920 57482158 -195774425 + MER46C DNA MER2_type 6 319 -19 210 279 66 16 chr2 57482598 57482659 -195773924 - L2 LINE L2 0 3272 3209 542 299 128 35 chr2 57482878 57483476 -195773107 + L2 LINE L2 2552 3312 -1 963 192 74 0 chr2 57483793 57483996 -195772587 + MER20 DNA MER1_type 2 219 0 654 228 19 0 chr2 57484762 57484924 -195771659 + MER45A DNA AcHobo 1 165 -13 275 370 0 30 chr2 57485345 57485480 -195771103 + MIR SINE MIR 6 136 -126 327 309 52 15 chr2 57485853 57485989 -195770594 + MER5B DNA MER1_type 36 176 -2 407 281 141 21 chr2 57486396 57486588 -195769995 - MIR SINE MIR 0 262 48 217 258 15 15 chr2 57488472 57488538 -195768045 + (TATATG)n Simple_repeat Simple_repeat 4 69 0 306 220 190 0 chr2 57488593 57488693 -195767890 + L2 LINE L2 3195 3313 0 557 239 38 44 chr2 57488794 57488953 -195767630 - L2 LINE L2 -1 3312 3155 2126 124 7 10 chr2 57489689 57489995 -195766588 - AluSx SINE Alu -7 305 1 1890 150 12 18 chr2 57490000 57490339 -195766244 - L1MC1 LINE L1 0 6333 5997 1196 171 22 18 chr2 57491323 57491545 -195765038 + AluJo SINE Alu 77 299 -13 2402 66 3 7 chr2 57491665 57491966 -195764617 + AluY SINE Alu 1 300 -11 360 0 0 0 chr2 57492067 57492107 -195764476 + (TG)n Simple_repeat Simple_repeat 1 40 0 218 229 8 0 chr2 57494439 57494561 -195762022 + (TA)n Simple_repeat Simple_repeat 2 124 0 2086 151 0 0 chr2 57494587 57494885 -195761698 - AluJo SINE Alu -13 299 2 1784 147 42 3 chr2 57495026 57495311 -195761272 - AluJo SINE Alu -16 296 1 999 227 105 32 chr2 57495851 57496164 -195760419 + MER46C DNA MER2_type 2 337 -1 248 0 0 30 chr2 57496621 57496654 -195759929 + (CA)n Simple_repeat Simple_repeat 1 32 0 1024 207 53 8 chr2 57497247 57497513 -195759070 - L1MA4 LINE L1 -11 6289 6012 2286 84 0 0 chr2 57497605 57497890 -195758693 - AluY SINE Alu -26 285 1 26 30 0 0 chr2 57497896 57497929 -195758654 + AT_rich Low_complexity Low_complexity 1 33 0 359 148 16 0 chr2 57498391 57498452 -195758131 + U7 snRNA snRNA 1 62 -1 244 277 50 15 chr2 57498507 57498709 -195757874 + L1ME2 LINE L1 5122 5330 -816 265 237 189 0 chr2 57498729 57498851 -195757732 + L1P5 LINE L1 5403 5547 -607 357 302 23 23 chr2 57498886 57499101 -195757482 + L1ME2 LINE L1 5733 5947 -217 2100 134 0 28 chr2 57499229 57499550 -195757033 + AluSx SINE Alu 1 312 0 362 259 47 65 chr2 57500458 57500628 -195755955 - L1ME4a LINE L1 -234 5887 5721 534 106 22 11 chr2 57501451 57501558 -195755025 - L1MA4A LINE L1 -35 6268 6158 27 81 0 0 chr2 57501680 57501742 -195754841 + AT_rich Low_complexity Low_complexity 1 62 0 2440 159 14 25 chr2 57503206 57503639 -195752944 - MSTA LTR MaLR 0 428 1 1060 301 115 42 chr2 57504731 57505446 -195751137 - L2 LINE L2 -417 2897 2131 1324 286 73 21 chr2 57505527 57505992 -195750591 - L2 LINE L2 -1 3312 2824 1524 172 184 11 chr2 57506050 57506470 -195750113 - MLT1F1 LTR MaLR 0 567 7 9002 225 44 28 chr2 57508036 57510156 -195746427 + L1M3d LINE L1 3 1690 -4963 2149 125 3 10 chr2 57510156 57510468 -195746115 + AluSx SINE Alu 1 310 -2 9002 225 44 28 chr2 57510468 57510923 -195745660 + L1M3d LINE L1 1690 2137 -4516 1155 162 34 20 chr2 57511420 57511624 -195744959 + AluJb SINE Alu 83 289 -23 198 378 44 0 chr2 57512803 57512893 -195743690 - MIR SINE MIR -148 114 21 1350 204 92 3 chr2 57513309 57513593 -195742990 + AluJb SINE Alu 1 309 -3 1275 167 44 4 chr2 57513625 57513852 -195742731 + MER46A DNA MER2_type 1 236 0 211 157 22 19 chr2 57513941 57513994 -195742589 - MIR SINE MIR -63 145 100 957 229 103 33 chr2 57515361 57515587 -195740996 - Charlie2 DNA MER1_type -6 2856 2590 1469 179 82 14 chr2 57515587 57515866 -195740717 + AluJb SINE Alu 1 298 -14 957 229 103 33 chr2 57515866 57516028 -195740555 - Charlie2 DNA MER1_type -272 2590 2441 925 192 41 9 chr2 57516060 57516279 -195740304 + MER33 DNA MER1_type 8 233 -91 1390 192 95 31 chr2 57516370 57516824 -195739759 - Charlie2 DNA MER1_type -520 2342 1860 786 313 19 22 chr2 57516838 57517154 -195739429 - Charlie2 DNA MER1_type -2547 315 1 253 276 162 29 chr2 57517715 57517820 -195738763 + L2 LINE L2 3190 3308 -5 282 255 28 21 chr2 57519377 57519493 -195737090 + MIR3 SINE MIR 63 180 -28 21 36 0 0 chr2 57520438 57520466 -195736117 + AT_rich Low_complexity Low_complexity 1 28 0 1469 133 38 11 chr2 57524806 57525070 -195731513 - L1MA6 LINE L1 -5 6295 6025 1971 154 0 3 chr2 57525088 57525386 -195731197 - AluJb SINE Alu -15 297 1 675 163 0 121 chr2 57526098 57526313 -195730270 + MER53 DNA DNA 1 189 0 661 135 27 0 chr2 57527449 57527560 -195729023 - L1MA6 LINE L1 -22 6278 6165 25 51 0 0 chr2 57529055 57529094 -195727489 + AT_rich Low_complexity Low_complexity 1 39 0 2346 87 20 0 chr2 57529475 57529773 -195726810 + AluSx SINE Alu 1 304 -8 2471 56 0 0 chr2 57530679 57530981 -195725602 + AluY SINE Alu 1 302 -9 343 237 83 18 chr2 57531175 57531344 -195725239 - L1ME4a LINE L1 -2 6119 5940 2139 197 79 17 chr2 57532043 57532778 -195723805 - MER21B LTR ERV1 -7 856 1 1726 136 66 4 chr2 57532994 57533267 -195723316 + AluSx SINE Alu 1 290 -22 2353 85 7 0 chr2 57533447 57533752 -195722831 - AluY SINE Alu -4 307 1 184 209 0 70 chr2 57533767 57533810 -195722773 + L2 LINE L2 15 54 -3260 373 171 12 24 chr2 57533871 57533953 -195722630 - L1MC5 LINE L1 -48 7913 7833 2175 103 7 13 chr2 57533999 57534309 -195722274 - AluSx SINE Alu -4 308 1 326 108 92 0 chr2 57534353 57534418 -195722165 + L1M4 LINE L1 5538 5608 -576 * 865 151 249 0 chr2 57534416 57534678 -195721905 - L1M4 LINE L1 -646 5528 5215 675 204 96 24 chr2 57534741 57534908 -195721675 + MER97b DNA MER1_type? 1 179 -874 333 292 32 13 chr2 57535072 57535226 -195721357 - L1MC5 LINE L1 -734 7227 7071 521 320 75 40 chr2 57535267 57535583 -195721000 - L1M4 LINE L1 -896 5250 4947 4573 157 16 22 chr2 57535583 57535855 -195720728 - L1MC1 LINE L1 0 6333 6061 1889 158 135 21 chr2 57535855 57536291 -195720292 - LTR45B LTR ERV1 -1 488 3 4573 157 16 22 chr2 57536291 57536865 -195719718 - L1MC1 LINE L1 -272 6061 5492 521 320 75 40 chr2 57536865 57537660 -195718923 - L1M4 LINE L1 -1199 4947 4099 444 267 112 16 chr2 57537922 57538180 -195718403 - L1M4 LINE L1 -2191 3955 3673 294 325 89 16 chr2 57540001 57540124 -195716459 + L2 LINE L2 3141 3272 0 1376 198 128 11 chr2 57541075 57541428 -195715155 - MSTD LTR MaLR -2 394 1 198 0 0 0 chr2 57541676 57541698 -195714885 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 451 198 0 0 chr2 57543276 57543357 -195713226 + MER96 DNA MER1_type? 1 81 -94 2248 218 58 22 chr2 57543360 57543914 -195712669 - MLT1E LTR MaLR 0 593 20 330 298 98 14 chr2 57543922 57544137 -195712446 - MLT1E-int LTR MaLR -2 1369 1137 463 213 223 30 chr2 57545187 57545389 -195711194 - MIR SINE MIR 0 262 22 247 296 0 28 chr2 57547680 57547751 -195708832 - L2 LINE L2 0 3272 3204 231 214 0 0 chr2 57548088 57548130 -195708453 - L2 LINE L2 -8 3264 3223 1498 245 69 32 chr2 57548187 57548681 -195707902 - LTR33 LTR ERVL -9 512 1 236 289 183 0 chr2 57548682 57548786 -195707797 - L2 LINE L2 -173 3099 2977 507 264 100 0 chr2 57548947 57549087 -195707496 - MIR SINE MIR -72 190 37 482 219 21 0 chr2 57549385 57549481 -195707102 - MER94 DNA DNA -36 98 1 1789 181 3 0 chr2 57550245 57550538 -195706045 - AluJb SINE Alu -18 294 1 705 133 0 0 chr2 57550614 57550712 -195705871 - AluJ/FLAM SINE Alu -212 100 3 235 354 24 37 chr2 57551949 57552031 -195704552 - L2 LINE L2 -86 3186 3106 221 330 82 54 chr2 57552228 57552507 -195704076 - L2 LINE L2 -145 3127 2841 513 0 0 0 chr2 57553161 57553218 -195703365 + (CA)n Simple_repeat Simple_repeat 2 58 0 4078 171 36 5 chr2 57553363 57554105 -195702478 - L1MB3 LINE L1 -2 6181 5417 2035 114 17 3 chr2 57555070 57555367 -195701216 + AluSx SINE Alu 1 301 -11 980 8 0 30 chr2 57555713 57555846 -195700737 + (TAGA)n Simple_repeat Simple_repeat 2 130 0 1316 155 0 23 chr2 57556054 57556273 -195700310 - AluJb SINE Alu -14 298 85 2105 119 7 26 chr2 57557405 57557715 -195698868 + AluSx SINE Alu 1 304 -8 720 229 106 5 chr2 57557882 57558070 -195698513 + L1MC5 LINE L1 7719 7925 -36 2053 118 3 23 chr2 57559275 57559579 -195697004 - AluSq SINE Alu -15 298 1 5037 139 20 18 chr2 57560243 57561086 -195695497 - L1PA16 LINE L1 0 6166 5322 1351 151 0 59 chr2 57561086 57561324 -195695259 - AluJb SINE Alu -17 295 72 3226 197 23 13 chr2 57561324 57562009 -195694574 - L1PA16 LINE L1 -817 5329 4638 280 318 68 0 chr2 57562022 57562110 -195694473 - MIR SINE MIR -74 188 95 244 248 99 50 chr2 57562744 57562885 -195693698 + MIR SINE MIR 17 164 -98 868 195 168 0 chr2 57564097 57564282 -195692301 + MER20 DNA MER1_type 1 216 -3 1579 320 108 48 chr2 57564961 57565194 -195691389 - L3 LINE CR1 -8 1569 1351 2215 114 3 0 chr2 57565194 57565502 -195691081 - AluSg1 SINE Alu 0 309 1 1579 320 108 48 chr2 57565502 57566210 -195690373 - L3 LINE CR1 -226 1351 526 1634 198 7 0 chr2 57566210 57566488 -195690095 - AluJo SINE Alu -32 280 1 1579 320 108 48 chr2 57566488 57566843 -195689740 - L3 LINE CR1 -1051 526 194 10254 167 67 16 chr2 57567921 57570775 -195685808 + L1MA9 LINE L1 3038 5747 -565 2329 108 3 0 chr2 57570775 57571082 -195685501 - AluSp SINE Alu -5 308 1 10254 167 67 16 chr2 57571082 57571206 -195685377 + L1MA9 LINE L1 5747 5863 -449 348 24 0 0 chr2 57571206 57571247 -195685336 + (CA)n Simple_repeat Simple_repeat 2 42 0 10254 167 67 16 chr2 57571247 57571383 -195685200 + L1MA9 LINE L1 5863 6309 -3 2846 206 110 26 chr2 57571473 57572285 -195684298 - L1ME2 LINE L1 0 6164 5285 2190 110 0 28 chr2 57572387 57572704 -195683879 - AluSq SINE Alu -5 308 1 1817 182 23 62 chr2 57572840 57573225 -195683358 + MLT1A2 LTR MaLR 1 370 -4 2171 116 10 0 chr2 57573950 57574243 -195682340 - AluSq SINE Alu -17 296 1 369 192 221 0 chr2 57575931 57576035 -195680548 - L2 LINE L2 0 3313 3187 324 0 0 0 chr2 57577534 57577570 -195679013 + (TCC)n Simple_repeat Simple_repeat 3 38 0 2836 7 0 0 chr2 57578795 57579097 -195677486 - AluY SINE Alu -8 303 2 467 249 145 62 chr2 57580760 57581097 -195675486 - MLT1K LTR MaLR -38 550 186 2003 141 10 0 chr2 57581294 57581592 -195674991 + AluSx SINE Alu 1 301 -11 201 94 0 0 chr2 57582375 57582407 -195674176 + (TA)n Simple_repeat Simple_repeat 2 33 0 1323 189 28 32 chr2 57582407 57582692 -195673891 - AluJo SINE Alu -28 284 1 1551 174 0 63 chr2 57583570 57583869 -195672714 + AluJo SINE Alu 1 280 -32 189 0 0 0 chr2 57584810 57584831 -195671752 + (T)n Simple_repeat Simple_repeat 1 21 0 2183 107 7 0 chr2 57584839 57585138 -195671445 + AluSp SINE Alu 1 301 -12 1475 168 114 0 chr2 57585144 57585424 -195671159 + AluJo SINE Alu 1 312 0 1634 97 0 0 chr2 57585905 57586111 -195670472 + AluSq SINE Alu 1 206 -107 339 45 0 0 chr2 57586111 57586155 -195670428 + AluSq SINE Alu 248 291 -12 350 287 148 9 chr2 57586809 57586924 -195669659 + L2 LINE L2 3142 3272 0 227 381 76 0 chr2 57588331 57588436 -195668147 + L2 LINE L2 3160 3272 0 749 188 38 6 chr2 57588966 57589126 -195667457 - L1MA5A LINE L1 -4 6293 6129 1837 176 10 3 chr2 57591168 57591474 -195665109 - AluJo SINE Alu -4 308 1 240 294 141 51 chr2 57591474 57591651 -195664932 + MIR SINE MIR 63 255 -7 986 196 98 5 chr2 57592334 57592538 -195664045 - MER58A DNA MER1_type -1 223 1 480 169 344 13 chr2 57592722 57592876 -195663707 + L1MB7 LINE L1 5964 6168 -16 2094 124 0 0 chr2 57594050 57594340 -195662243 + AluSx SINE Alu 1 290 -22 369 262 0 0 chr2 57596088 57596172 -195660411 + MIR SINE MIR 72 155 -107 974 171 98 4 chr2 57596179 57596425 -195660158 + L1MA7 LINE L1 6018 6286 -5 1041 184 4 71 chr2 57796482 57796710 -195459873 + AluJo SINE Alu 59 270 -42 2137 95 28 0 chr2 57796710 57796993 -195459590 - AluY SINE Alu -20 291 1 1041 184 4 71 chr2 57796993 57797019 -195459564 + AluJo SINE Alu 270 296 -16 840 280 52 13 chr2 57797066 57797373 -195459210 + L1ME4a LINE L1 5567 5885 -236 636 66 55 0 chr2 57797509 57797600 -195458983 + L1MA9 LINE L1 6158 6253 -59 1334 180 16 20 chr2 57797600 57797845 -195458738 + AluJo SINE Alu 1 244 -68 286 240 120 10 chr2 57797866 57797966 -195458617 - MIR SINE MIR -121 141 31 1437 184 40 7 chr2 57798133 57798411 -195458172 - MLT2D LTR ERVL -123 291 5 561 187 89 0 chr2 57798983 57799106 -195457477 - L1ME3A LINE L1 0 6170 6037 1736 166 0 24 chr2 57799106 57799395 -195457188 + AluJo SINE Alu 1 282 -30 712 271 75 24 chr2 57799526 57799818 -195456765 - L1ME LINE L1 -413 5757 5451 1879 68 141 0 chr2 57800856 57801131 -195455452 - AluSq SINE Alu 0 310 1 1655 148 0 4 chr2 57801378 57801628 -195454955 + AluSx SINE Alu 50 298 -14 447 134 30 0 chr2 57801916 57801983 -195454600 + MER21B LTR ERV1 12 80 -783 2669 219 87 37 chr2 57802015 57802420 -195454163 + MER21B LTR ERV1 19 402 -461 870 140 0 22 chr2 57802420 57802556 -195454027 - FLAM_C SINE Alu 0 133 1 2669 219 87 37 chr2 57802556 57802908 -195453675 + MER21B LTR ERV1 402 814 -49 1641 165 3 21 chr2 57802914 57803205 -195453378 - AluJo SINE Alu -26 286 1 270 114 91 0 chr2 57803267 57803311 -195453272 - MLT2D LTR ERVL 0 414 367 340 20 0 0 chr2 57803329 57803374 -195453209 + MLT2C1 LTR ERVL 350 386 -11 381 141 31 0 chr2 57803508 57803572 -195453011 + Alu SINE Alu 235 300 -2 364 324 56 29 chr2 57803665 57803860 -195452723 - MIR SINE MIR -33 229 32 454 147 0 0 chr2 57804128 57804203 -195452380 + MER116 DNA Mariner 6 80 0 2239 82 14 0 chr2 57804252 57804572 -195452011 - AluSq SINE Alu 0 324 1 273 240 128 76 chr2 57804648 57804758 -195451825 - L1MC4a LINE L1 -89 6032 5929 405 39 0 0 chr2 57804758 57804809 -195451774 + (CA)n Simple_repeat Simple_repeat 2 52 0 273 240 128 76 chr2 57804809 57804948 -195451635 - L1MC4a LINE L1 -192 5929 5768 1154 197 50 141 chr2 57805053 57805556 -195451027 - L1ME3 LINE L1 -67 6095 5639 1532 187 58 3 chr2 57806234 57806528 -195450055 - AluJo SINE Alu -2 310 1 502 303 125 34 chr2 57806528 57806577 -195450006 + L2 LINE L2 2642 2685 -628 1920 131 10 0 chr2 57806577 57806868 -195449715 - AluSx SINE Alu -18 294 1 502 303 125 34 chr2 57806868 57807235 -195449348 + L2 LINE L2 2685 3101 -212 26 50 0 0 chr2 57807236 57807276 -195449307 + AT_rich Low_complexity Low_complexity 1 40 0 1020 234 75 16 chr2 57807302 57807554 -195449029 - MLT1J LTR MaLR -7 504 238 556 274 74 86 chr2 57807618 57807916 -195448667 + L1MC5 LINE L1 7186 7318 -643 4545 99 49 87 chr2 57807916 57808732 -195447851 - LTR1 LTR ERV1 0 785 1 556 274 74 86 chr2 57808732 57809101 -195447482 + L1MC5 LINE L1 7318 7690 -271 2056 85 8 0 chr2 57809113 57809373 -195447210 + AluSx SINE Alu 11 272 -40 238 67 0 0 chr2 57809473 57809503 -195447080 + HSMAR1 DNA Mariner 1258 1287 0 2053 112 7 14 chr2 57809958 57810253 -195446330 + AluSx SINE Alu 1 293 -19 204 125 0 0 chr2 57810776 57810808 -195445775 + (T)n Simple_repeat Simple_repeat 1 32 0 2315 87 0 0 chr2 57811396 57811684 -195444899 + AluSq SINE Alu 5 292 -21 1366 193 7 40 chr2 57812222 57812522 -195444061 - AluJo SINE Alu -21 291 2 2285 112 0 0 chr2 57812688 57812984 -195443599 + AluSx SINE Alu 7 302 -10 239 200 57 62 chr2 57812994 57813105 -195443478 + L1ME LINE L1 5317 5431 -731 1874 178 0 6 chr2 57813105 57813419 -195443164 + AluJb SINE Alu 1 312 0 239 200 57 62 chr2 57813419 57813443 -195443140 + L1ME LINE L1 5431 5454 -708 23 0 0 0 chr2 57813463 57813486 -195443097 + AT_rich Low_complexity Low_complexity 1 23 0 2022 123 10 10 chr2 57813561 57813854 -195442729 + AluSx SINE Alu 1 293 -19 2035 128 0 28 chr2 57813855 57814175 -195442408 + AluSx SINE Alu 1 311 -1 242 119 0 164 chr2 57814177 57814217 -195442366 - L1MA10 LINE L1 -13 6321 6295 2194 114 0 0 chr2 57814217 57814514 -195442069 + AluSx SINE Alu 1 297 -15 242 119 0 164 chr2 57814514 57814540 -195442043 - L1MA10 LINE L1 -39 6295 6266 2016 194 20 53 chr2 57814583 57815053 -195441530 - L1MA10 LINE L1 -55 6279 5821 2228 79 38 0 chr2 57815086 57815376 -195441207 - AluSp SINE Alu -12 301 1 1397 209 41 29 chr2 57815595 57815911 -195440672 + MER58B DNA MER1_type 22 341 0 292 273 18 73 chr2 57816509 57816619 -195439964 + L2 LINE L2 3168 3271 -1 378 254 136 23 chr2 57816913 57817133 -195439450 - L1ME4a LINE L1 -4 6117 5873 827 294 20 8 chr2 57818317 57818565 -195438018 - MIR SINE MIR 0 262 12 3192 209 77 64 chr2 57818698 57819872 -195436711 + L1MC5 LINE L1 6742 7930 -31 231 205 0 0 chr2 57819995 57820034 -195436549 - L2 LINE L2 -13 3259 3221 457 282 214 22 chr2 57820388 57820743 -195435840 + L2 LINE L2 2227 2649 -665 282 206 47 91 chr2 57820789 57820908 -195435675 - MER5A DNA MER1_type 0 178 63 848 124 0 0 chr2 57820908 57821021 -195435562 - AluJb SINE Alu -11 301 189 316 320 35 102 chr2 57821086 57821430 -195435153 + L2 LINE L2 2932 3252 -20 1856 154 15 39 chr2 57821829 57821889 -195434694 + L1MC3 LINE L1 7241 7301 -484 2317 82 10 0 chr2 57821889 57822182 -195434401 - AluSp SINE Alu -17 296 1 1856 154 15 39 chr2 57822182 57822459 -195434124 + L1MC3 LINE L1 7301 7570 -215 906 163 0 131 chr2 57822473 57822718 -195433865 + AluJb SINE Alu 87 299 -13 436 132 55 44 chr2 57822718 57822809 -195433774 + L1MC3 LINE L1 7589 7680 -105 21 36 0 0 chr2 57822809 57822837 -195433746 + AT_rich Low_complexity Low_complexity 1 28 0 2151 121 3 3 chr2 57822880 57823187 -195433396 - AluSx SINE Alu -5 307 1 654 296 83 43 chr2 57823469 57823817 -195432766 + L2 LINE L2 2948 3309 -4 1696 217 66 3 chr2 57823832 57824182 -195432401 - MLT1A2 LTR MaLR -2 372 1 238 265 43 0 chr2 57824812 57824929 -195431654 + (TA)n Simple_repeat Simple_repeat 1 122 0 201 121 0 0 chr2 57825177 57825210 -195431373 + (CA)n Simple_repeat Simple_repeat 2 34 0 271 246 15 0 chr2 57825617 57825682 -195430901 - L2 LINE L2 -4 3309 3244 1397 92 11 0 chr2 57825699 57825884 -195430699 + AluSp SINE Alu 1 187 -126 5484 186 20 36 chr2 57826076 57827198 -195429385 - Charlie1a DNA MER1_type -351 1104 1 655 213 16 0 chr2 57828133 57828260 -195428323 - MER20 DNA MER1_type -2 217 89 1793 161 50 7 chr2 57828305 57828603 -195427980 + AluJo SINE Alu 1 311 -1 261 0 0 0 chr2 57828777 57828806 -195427777 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2434 66 7 0 chr2 57828808 57829110 -195427473 - AluY SINE Alu -7 304 1 183 80 0 0 chr2 57829110 57829135 -195427448 + (T)n Simple_repeat Simple_repeat 1 25 0 287 194 86 54 chr2 57829296 57829389 -195427194 + MIR SINE MIR 88 183 -79 216 0 0 0 chr2 57829578 57829602 -195426981 + (A)n Simple_repeat Simple_repeat 1 24 0 342 251 17 100 chr2 57830119 57830259 -195426324 - L1ME LINE L1 -322 5799 5683 2331 67 0 0 chr2 57830259 57830565 -195426018 - AluY SINE Alu 0 306 1 342 251 17 100 chr2 57830565 57830654 -195425929 - L1ME LINE L1 -438 5683 5588 22 0 0 0 chr2 57831121 57831143 -195425440 + AT_rich Low_complexity Low_complexity 1 22 0 261 312 181 7 chr2 57831792 57831930 -195424653 - MIR3 SINE MIR -8 200 39 1910 152 0 40 chr2 57832256 57832578 -195424005 + AluJo SINE Alu 1 309 -3 8489 149 15 26 chr2 57832579 57833372 -195423211 + L1PB1 LINE L1 3604 4404 -1747 180 0 0 0 chr2 57833372 57833392 -195423191 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 8489 149 15 26 chr2 57833392 57834384 -195422199 + L1PB1 LINE L1 4404 5405 -746 2525 102 12 77 chr2 57834384 57834426 -195422157 + THE1C LTR MaLR 1 44 -331 2160 123 20 0 chr2 57834426 57834726 -195421857 - AluSx SINE Alu -6 306 1 2525 102 12 77 chr2 57834726 57835042 -195421541 + THE1C LTR MaLR 44 333 -42 2356 73 0 10 chr2 57835042 57835343 -195421240 - AluY SINE Alu -13 298 1 2525 102 12 77 chr2 57835343 57835384 -195421199 + THE1C LTR MaLR 333 375 0 8489 149 15 26 chr2 57835384 57835787 -195420796 + L1PB1 LINE L1 5405 5762 -389 345 24 0 0 chr2 57835787 57835829 -195420754 + (CA)n Simple_repeat Simple_repeat 2 43 0 8489 149 15 26 chr2 57835829 57836215 -195420368 + L1PB1 LINE L1 5762 6151 0 902 181 34 23 chr2 57836262 57836439 -195420144 - AluJb SINE Alu -4 308 130 444 294 82 31 chr2 57837446 57837701 -195418882 - MER102a DNA MER1_type -36 294 27 622 244 70 19 chr2 57837853 57838009 -195418574 + MIR SINE MIR 1 164 -98 1641 176 33 4 chr2 57838074 57838346 -195418237 - AluJb SINE Alu -32 280 1 242 164 18 0 chr2 57839049 57839104 -195417479 + CT-rich Low_complexity Low_complexity 3 58 0 1905 144 3 10 chr2 57839107 57839405 -195417178 - AluJb SINE Alu -16 296 1 377 252 201 0 chr2 57840043 57840182 -195416401 - MIR SINE MIR 0 262 96 527 229 210 65 chr2 57840582 57840655 -195415928 - L2 LINE L2 0 3313 3252 5801 66 10 0 chr2 57840655 57841338 -195415245 - LTR8 LTR ERV1 -1 690 1 527 229 210 65 chr2 57841338 57841617 -195414966 - L2 LINE L2 -61 3252 2910 843 217 6 0 chr2 57841859 57842025 -195414558 - MER5A DNA MER1_type -21 168 2 1776 117 100 7 chr2 57842989 57843280 -195413303 - MER1B DNA MER1_type -21 318 1 2236 90 0 3 chr2 57849549 57849837 -195406746 - AluSq SINE Alu -26 287 1 703 227 124 16 chr2 57850738 57850932 -195405651 - MER58C DNA MER1_type 0 215 1 340 344 12 0 chr2 57851642 57851802 -195404781 - MER102b DNA MER1_type -13 328 167 2262 114 0 3 chr2 57853405 57853712 -195402871 + AluSx SINE Alu 1 306 -6 1835 141 10 30 chr2 57854217 57854521 -195402062 - AluJo SINE Alu -14 298 1 23 0 0 0 chr2 57856441 57856464 -195400119 + AT_rich Low_complexity Low_complexity 1 23 0 2266 85 3 14 chr2 57857152 57857447 -195399136 - AluSp SINE Alu -21 292 1 552 239 200 34 chr2 57858041 57858246 -195398337 + MIR SINE MIR 20 258 -4 306 0 0 0 chr2 57858513 57858547 -195398036 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 377 265 83 15 chr2 57858993 57859125 -195397458 + MIR3 SINE MIR 68 208 0 1865 173 10 3 chr2 57859265 57859566 -195397017 - AluJo SINE Alu -9 303 1 281 301 142 45 chr2 57859566 57859742 -195396841 + MIR SINE MIR 63 255 -7 892 196 98 5 chr2 57860425 57860629 -195395954 - MER58A DNA MER1_type -1 223 1 413 166 351 13 chr2 57860813 57860964 -195395619 + L1MB7 LINE L1 5964 6165 -19 2090 124 0 0 chr2 57862141 57862431 -195394152 + AluSx SINE Alu 1 290 -22 378 262 0 0 chr2 57864045 57864129 -195392454 + MIR SINE MIR 72 155 -107 847 171 98 4 chr2 57864136 57864382 -195392201 + L1MA7 LINE L1 6018 6286 -5 233 304 0 0 chr2 57864426 57864495 -195392088 + MIR SINE MIR 187 255 -7 2273 80 10 0 chr2 57864753 57865054 -195391529 - AluY SINE Alu -7 304 1 362 236 94 47 chr2 57865401 57865507 -195391076 + MIR SINE MIR 30 140 -68 570 162 99 0 chr2 57866036 57866147 -195390436 + FLAM_C SINE Alu 12 133 -10 254 283 0 0 chr2 57866187 57866247 -195390336 - MIR SINE MIR -156 106 47 291 261 121 48 chr2 57866599 57866760 -195389823 + L1ME4a LINE L1 5767 5915 -206 2450 76 0 16 chr2 57866760 57867075 -195389508 + AluY SINE Alu 1 310 -1 291 261 121 48 chr2 57867075 57867243 -195389340 + L1ME4a LINE L1 5915 6120 -1 3898 217 52 9 chr2 57868214 57868855 -195387728 + L1MB7 LINE L1 3652 4264 -1882 4468 146 63 31 chr2 57868855 57869021 -195387562 - MER6 DNA MER2_type 0 865 706 2047 133 17 0 chr2 57869021 57869314 -195387269 + AluSx SINE Alu 1 298 -14 4468 146 63 31 chr2 57869314 57869627 -195386956 - MER6 DNA MER2_type -159 706 405 222 37 0 0 chr2 57869627 57869654 -195386929 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 4468 146 63 31 chr2 57869654 57870011 -195386572 - MER6 DNA MER2_type -460 405 1 3898 217 52 9 chr2 57870011 57870796 -195385787 + L1MB7 LINE L1 4264 5039 -1107 655 248 43 0 chr2 57870836 57870977 -195385606 - AluJb SINE Alu -29 283 137 3843 148 54 34 chr2 57870980 57871748 -195384835 + L1MB7 LINE L1 5031 5821 -363 1539 179 43 12 chr2 57871748 57872077 -195384506 + MER44D DNA MER2_type 1 609 0 3843 148 54 34 chr2 57872077 57872330 -195384253 + L1MB7 LINE L1 5821 6068 -116 271 278 53 68 chr2 57872363 57872496 -195384087 + L2 LINE L2 3142 3272 0 25 31 0 0 chr2 57873741 57873773 -195382810 + AT_rich Low_complexity Low_complexity 1 32 0 199 303 106 58 chr2 57873987 57874175 -195382408 + MIR SINE MIR 53 249 -13 224 273 76 0 chr2 57874602 57874668 -195381915 - MIR SINE MIR -32 230 160 201 296 0 0 chr2 57876727 57876781 -195379802 + L3b LINE CR1 1199 1252 -331 2085 138 0 7 chr2 57876935 57877240 -195379343 + AluJb SINE Alu 1 303 -9 2098 130 0 0 chr2 57877667 57877975 -195378608 + AluSx SINE Alu 1 308 0 313 262 289 21 chr2 57879143 57879330 -195377253 - MIR SINE MIR -12 250 14 2180 106 0 0 chr2 57881325 57881634 -195374949 + AluSx SINE Alu 1 309 0 1430 215 28 30 chr2 57882006 57882428 -195374155 - MLT1D LTR MaLR -2 503 1 195 262 16 0 chr2 57882754 57882815 -195373768 - L3b LINE CR1 -384 1199 1138 910 102 8 0 chr2 57883000 57883128 -195373455 - FLAM_C SINE Alu -6 137 9 505 223 10 0 chr2 57883326 57883429 -195373154 + MIR SINE MIR 70 173 -89 670 227 149 21 chr2 57883471 57883665 -195372918 - MIR SINE MIR -34 228 10 2224 135 0 0 chr2 57883771 57884083 -195372500 - AluSx SINE Alu 0 312 1 423 211 39 0 chr2 57884553 57884657 -195371926 + L1ME3A LINE L1 5854 5961 -209 354 244 50 90 chr2 57884706 57884907 -195371676 + L1ME3A LINE L1 5963 6155 -15 264 184 0 20 chr2 57884977 57885026 -195371557 - MER5A DNA MER1_type -110 79 32 1754 189 3 0 chr2 57885093 57885384 -195371199 + AluJo SINE Alu 1 292 -20 384 286 32 32 chr2 57888036 57888162 -195368421 - L2 LINE L2 -1 3312 3187 1868 142 66 0 chr2 57888900 57889188 -195367395 - AluJb SINE Alu -5 307 1 5778 175 117 31 chr2 57889312 57890558 -195366025 + MER45R DNA AcHobo 1 1391 -190 210 71 0 0 chr2 57890558 57890586 -195365997 + (TTATA)n Simple_repeat Simple_repeat 5 32 0 5778 175 117 31 chr2 57890586 57890794 -195365789 + MER45R DNA AcHobo 1391 1580 -1 5862 126 17 40 chr2 57891334 57892393 -195364190 + L1PA14 LINE L1 4351 5433 -728 1986 148 0 14 chr2 57892393 57892690 -195363893 + AluSx SINE Alu 1 293 -19 2313 103 0 0 chr2 57892690 57892990 -195363593 + AluY SINE Alu 1 301 -10 2243 104 3 19 chr2 57892993 57893300 -195363283 + AluSp SINE Alu 3 304 -9 5862 126 17 40 chr2 57893300 57894083 -195362500 + L1PA14 LINE L1 5434 6157 -4 180 271 85 17 chr2 57894394 57894453 -195362130 + L2 LINE L2 3160 3222 -50 258 346 103 7 chr2 57894506 57894642 -195361941 - MIR SINE MIR -78 184 36 605 150 0 18 chr2 57894826 57894939 -195361644 - AluJ SINE Alu -17 295 185 * 675 148 189 0 chr2 57894931 57895053 -195361530 - AluJ SINE Alu -165 147 3 613 106 0 0 chr2 57895768 57895853 -195360730 + AluSg/x SINE Alu 211 295 -15 581 236 31 62 chr2 57895883 57896175 -195360408 + L1MC5 LINE L1 7631 7913 -48 2289 112 0 0 chr2 57896175 57896471 -195360112 + AluSx SINE Alu 1 296 -16 1791 174 0 13 chr2 57896493 57896798 -195359785 + AluJb SINE Alu 9 309 -3 35 0 0 0 chr2 57896848 57896883 -195359700 + AT_rich Low_complexity Low_complexity 1 35 0 2051 155 0 0 chr2 57896886 57897195 -195359388 + AluSx SINE Alu 1 309 -3 677 82 0 0 chr2 57897195 57897292 -195359291 - L1MA1 LINE L1 -8 6294 6198 389 320 8 8 chr2 57897525 57897647 -195358936 - MIR3 SINE MIR -22 186 65 2344 179 36 2 chr2 57897792 57898260 -195358323 - MER41B LTR ERV1 -38 597 114 744 153 18 102 chr2 57898834 57898943 -195357640 + MER33 DNA MER1_type 1 110 -2462 670 189 25 16 chr2 57898943 57899065 -195357518 + FLAM_C SINE Alu 3 125 -8 744 153 18 102 chr2 57899065 57899150 -195357433 + MER33 DNA MER1_type 110 160 -2412 2184 126 3 0 chr2 57899150 57899460 -195357123 - AluSx SINE Alu -1 311 1 744 153 18 102 chr2 57899460 57899506 -195357077 + MER33 DNA MER1_type 160 208 -103 1383 186 126 27 chr2 57899538 57899903 -195356680 - L1ME1 LINE L1 -5 6161 5761 4124 138 44 6 chr2 57899905 57900585 -195355998 + MER50 LTR ERV1 1 706 -28 390 154 122 32 chr2 57900626 57900749 -195355834 + MER33 DNA MER1_type 228 361 -2 277 299 45 109 chr2 57900917 57901118 -195355465 - L2 LINE L2 -85 3187 3000 1129 187 117 61 chr2 57902266 57902592 -195353991 - MER2 DNA MER2_type 0 344 1 23 0 0 0 chr2 57902962 57902985 -195353598 + AT_rich Low_complexity Low_complexity 1 23 0 226 321 25 12 chr2 57903022 57903103 -195353480 + MIR3 SINE MIR 82 163 -45 201 291 225 20 chr2 57903604 57903755 -195352828 - L2 LINE L2 -284 2988 2807 316 278 222 0 chr2 57904120 57904282 -195352301 + L1ME LINE L1 5518 5715 -406 1507 165 113 9 chr2 57904285 57904612 -195351971 - MER46B DNA MER2_type 0 236 1 245 245 132 75 chr2 57906238 57906397 -195350186 + MER5A DNA MER1_type 18 185 -4 306 0 0 0 chr2 57906770 57906804 -195349779 + (CA)n Simple_repeat Simple_repeat 2 35 0 24 0 0 0 chr2 57907797 57907821 -195348762 + AT_rich Low_complexity Low_complexity 1 24 0 1589 162 53 33 chr2 57909652 57909954 -195346629 - AluJo SINE Alu -4 308 1 180 323 0 40 chr2 57911198 57911297 -195345286 + MIR SINE MIR 167 261 -1 21 0 0 0 chr2 57913024 57913045 -195343538 + AT_rich Low_complexity Low_complexity 1 21 0 693 124 19 9 chr2 57913045 57913150 -195343433 - U6 snRNA snRNA 0 107 2 2327 86 3 0 chr2 57913150 57913442 -195343141 - AluSc SINE Alu -16 293 1 23 54 0 0 chr2 57913993 57914030 -195342553 + AT_rich Low_complexity Low_complexity 1 37 0 301 231 167 27 chr2 57914114 57914300 -195342283 + L1ME4a LINE L1 5257 5468 -2340 921 230 110 65 chr2 57914467 57914928 -195341655 + L1ME4a LINE L1 5474 5970 -151 2180 116 0 3 chr2 57914928 57915231 -195341352 + AluSx SINE Alu 1 302 -10 921 230 110 65 chr2 57915231 57915368 -195341215 + L1ME4a LINE L1 5970 6099 -22 307 329 0 12 chr2 57915451 57915533 -195341050 - MIR SINE MIR -83 125 45 287 282 153 16 chr2 57916714 57916838 -195339745 + MIR SINE MIR 72 212 -50 3818 213 65 53 chr2 57916963 57919089 -195337494 + L1MC4 LINE L1 4125 7515 -293 1663 149 51 0 chr2 57919365 57919641 -195336942 + AluJb SINE Alu 11 300 -12 1050 111 37 6 chr2 57920088 57920250 -195336333 - BC200 scRNA scRNA -33 167 1 304 237 252 22 chr2 57920285 57920420 -195336163 - MIR3 SINE MIR -1 207 42 841 336 162 44 chr2 57920863 57921524 -195335059 + L2 LINE L2 163 745 -2569 306 0 0 0 chr2 57921524 57921558 -195335025 + (CA)n Simple_repeat Simple_repeat 2 35 0 841 336 162 44 chr2 57921558 57922560 -195334023 + L2 LINE L2 745 2022 -1292 482 298 76 57 chr2 57922574 57922890 -195333693 + L2 LINE L2 2202 2523 -791 23 86 0 0 chr2 57923275 57923333 -195333250 + AT_rich Low_complexity Low_complexity 1 58 0 238 239 183 28 chr2 57927505 57927576 -195329007 - MIR SINE MIR -176 86 5 1536 185 23 80 chr2 57927576 57927966 -195328617 + MLT1A2 LTR MaLR 7 374 0 370 309 162 0 chr2 57929107 57929243 -195327340 + MIR SINE MIR 25 182 -80 207 261 163 33 chr2 57929261 57929353 -195327230 - MIR SINE MIR -148 114 11 465 243 21 36 chr2 57929560 57929700 -195326883 - MIR SINE MIR -9 253 116 610 332 107 11 chr2 57929755 57930128 -195326455 + L1ME2 LINE L1 37 445 -5951 691 209 52 13 chr2 57930342 57930495 -195326088 + MER58B DNA MER1_type 182 340 -1 470 246 103 68 chr2 57930497 57930714 -195325869 + L1ME2 LINE L1 649 857 -5539 2020 140 7 0 chr2 57930714 57931006 -195325577 - AluSx SINE Alu -18 294 1 470 246 103 68 chr2 57931006 57931373 -195325210 + L1ME2 LINE L1 857 1315 -5081 1606 180 3 49 chr2 57931373 57931700 -195324883 + AluJo SINE Alu 1 312 0 470 246 103 68 chr2 57931700 57931871 -195324712 + L1ME2 LINE L1 1315 1478 -4918 1798 187 25 25 chr2 57931972 57932366 -195324217 - MER82 DNA MER2_type 0 653 188 1429 137 30 4 chr2 57932366 57932628 -195323955 - L1MA4 LINE L1 0 6300 6032 1798 187 25 25 chr2 57932628 57932790 -195323793 - MER82 DNA MER2_type -465 188 28 1734 174 3 7 chr2 57932848 57933146 -195323437 + AluJo SINE Alu 3 299 -13 1199 268 39 48 chr2 57933154 57933744 -195322839 + L1ME2 LINE L1 1627 2211 -4185 2700 219 119 86 chr2 57933749 57934947 -195321636 + L1ME2 LINE L1 2644 3901 -2314 2196 116 6 6 chr2 57934947 57935258 -195321325 + AluSx SINE Alu 1 311 -1 2700 219 119 86 chr2 57935258 57935508 -195321075 + L1ME2 LINE L1 3901 4141 -2074 298 258 26 58 chr2 57935540 57935695 -195320888 + L1ME2 LINE L1 4239 4388 -1827 1260 280 90 60 chr2 57936867 57937656 -195318927 + L2 LINE L2 2217 3023 -290 1032 184 14 52 chr2 57937748 57937895 -195318688 + AluJo SINE Alu 1 139 -173 2863 62 3 0 chr2 57937895 57938249 -195318334 - THE1A LTR MaLR 0 355 1 1032 184 14 52 chr2 57938249 57938313 -195318270 + AluJo SINE Alu 139 204 -108 1475 249 32 16 chr2 57938502 57938880 -195317703 + LTR40b LTR ERVL 64 447 -15 2904 214 61 20 chr2 57938880 57940268 -195316315 + L1ME2 LINE L1 4618 6066 -167 258 125 0 0 chr2 57940317 57940357 -195316226 + MER3 DNA MER1_type 10 49 -160 376 211 32 21 chr2 57940362 57940457 -195316126 + L1ME2 LINE L1 6129 6224 -9 296 210 42 70 chr2 57940489 57940632 -195315951 + L1MC5 LINE L1 7453 7591 -370 1956 126 35 0 chr2 57940682 57940967 -195315616 + AluSq SINE Alu 1 295 -18 21 71 0 0 chr2 57941381 57941423 -195315160 + AT_rich Low_complexity Low_complexity 1 42 0 505 260 131 91 chr2 57942656 57943230 -195313353 + L1M4 LINE L1 4747 5343 -803 845 279 37 17 chr2 57943299 57943627 -195312956 + L1P2 LINE L1 5477 5813 -341 301 323 45 65 chr2 57943922 57944077 -195312506 - L2 LINE L2 -2 3270 3119 817 185 0 0 chr2 57944645 57944775 -195311808 + AluJ SINE Alu 1 130 -172 2261 113 0 0 chr2 57944778 57945087 -195311496 + AluSx SINE Alu 1 309 -3 1602 169 51 0 chr2 57945101 57945374 -195311209 + AluJo SINE Alu 1 287 -25 983 199 6 0 chr2 57945403 57945602 -195310981 + AluJ SINE Alu 120 319 0 628 160 19 0 chr2 57945604 57945710 -195310873 + FLAM_C SINE Alu 2 109 -34 207 282 64 13 chr2 57946610 57946688 -195309895 + L2 LINE L2 2581 2662 -652 23 54 0 0 chr2 57947435 57947472 -195309111 + AT_rich Low_complexity Low_complexity 1 37 0 412 282 280 25 chr2 57947472 57947906 -195308677 + L2 LINE L2 2771 3312 -1 2280 86 10 10 chr2 57948220 57948521 -195308062 + AluSq SINE Alu 1 301 -12 3181 136 153 23 chr2 57949091 57949746 -195306837 - Tigger3(Golem) DNA MER2_type -1 3028 2289 705 157 0 0 chr2 57949747 57949855 -195306728 - Tigger3(Golem) DNA MER2_type -2921 108 1 22 80 0 0 chr2 57950947 57950997 -195305586 + GC_rich Low_complexity Low_complexity 1 50 0 22 80 0 0 chr2 57951168 57951218 -195305365 + GC_rich Low_complexity Low_complexity 1 50 0 267 114 0 0 chr2 57951338 57951382 -195305201 + (TCC)n Simple_repeat Simple_repeat 2 45 0 21 0 0 0 chr2 57951507 57951528 -195305055 + GC_rich Low_complexity Low_complexity 1 21 0 1045 169 113 40 chr2 57952812 57953113 -195303470 + MER33 DNA MER1_type 1 323 -1 2056 129 20 23 chr2 57953233 57953583 -195303000 + L1MC2 LINE L1 5996 6344 0 22 35 0 0 chr2 57953863 57953892 -195302691 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 57954274 57954296 -195302287 + AT_rich Low_complexity Low_complexity 1 22 0 26 50 0 0 chr2 57954526 57954566 -195302017 + AT_rich Low_complexity Low_complexity 1 40 0 2027 136 3 0 chr2 57954583 57954892 -195301691 + AluSq SINE Alu 4 313 0 2475 51 0 10 chr2 57955106 57955420 -195301163 + AluY SINE Alu 1 311 0 267 170 0 90 chr2 57955542 57955642 -195300941 + L1MC4 LINE L1 6615 6705 -1337 2350 175 7 22 chr2 57955651 57956063 -195300520 + Tigger7 DNA MER2_type 1 406 -2081 272 175 10 5 chr2 57956063 57956265 -195300318 + AluJb SINE Alu 1 294 -8 217 241 69 81 chr2 57957032 57957119 -195299464 + MIR SINE MIR 177 262 0 1556 199 7 0 chr2 57957323 57957619 -195298964 + AluJo SINE Alu 3 300 -12 23 86 0 0 chr2 57957784 57957842 -195298741 + AT_rich Low_complexity Low_complexity 1 58 0 779 133 0 17 chr2 57958507 57958627 -195297956 - FLAM_C SINE Alu -15 118 1 339 258 79 11 chr2 57958661 57958750 -195297833 + MIR SINE MIR 21 115 -93 1223 136 11 0 chr2 57958978 57959169 -195297414 - AluJb SINE Alu -17 295 103 328 167 105 128 chr2 58009337 58009396 -195247187 - L1MA10 LINE L1 -9 6300 6241 2029 138 7 7 chr2 58009396 58009692 -195246891 - AluSq SINE Alu -17 296 1 328 167 105 128 chr2 58009692 58009787 -195246796 - L1MA10 LINE L1 -68 6241 5984 2685 90 36 5 chr2 58009828 58009863 -195246720 - L1PB4 LINE L1 -330 5826 5794 339 25 0 0 chr2 58009863 58009903 -195246680 + (TG)n Simple_repeat Simple_repeat 2 41 0 2685 90 36 5 chr2 58009903 58010254 -195246329 - L1PB4 LINE L1 -362 5794 5428 271 139 0 125 chr2 58010266 58010338 -195246245 - L1PB4 LINE L1 -1565 4581 4519 * 4967 123 30 21 chr2 58010309 58011009 -195245574 - L1MA3 LINE L1 -249 6056 5364 2059 124 14 0 chr2 58011009 58011300 -195245283 - AluSp SINE Alu -18 295 1 4967 123 30 21 chr2 58011300 58011989 -195244594 - L1MA3 LINE L1 -941 5364 4645 228 77 58 0 chr2 58012136 58012188 -195244395 + (TA)n Simple_repeat Simple_repeat 2 56 0 1576 79 15 5 chr2 58012690 58012932 -195243651 + AluSg/x SINE Alu 79 322 0 20037 128 33 27 chr2 58012932 58015393 -195241190 + L1M1 LINE L1 91 2535 -5030 1908 139 13 13 chr2 58015393 58015694 -195240889 + AluSx SINE Alu 1 301 -11 20037 128 33 27 chr2 58015694 58016102 -195240481 + L1M1 LINE L1 2535 2939 -4626 2136 135 3 3 chr2 58016102 58016413 -195240170 + AluSx SINE Alu 1 311 -1 20037 128 33 27 chr2 58016413 58016779 -195239804 + L1M1 LINE L1 2939 3348 -4217 12355 160 27 28 chr2 58016879 58017300 -195239283 + L1M1 LINE L1 3187 3607 -3958 1773 181 7 13 chr2 58017300 58017604 -195238979 + AluJb SINE Alu 1 302 -10 12355 160 27 28 chr2 58017604 58019632 -195236951 + L1M1 LINE L1 3607 5634 -1931 2428 96 0 0 chr2 58019632 58019944 -195236639 + AluSp SINE Alu 1 312 -1 12355 160 27 28 chr2 58019944 58019973 -195236610 + L1M1 LINE L1 5634 5662 -1903 2135 123 3 7 chr2 58019973 58020274 -195236309 + AluSx SINE Alu 1 300 -12 12355 160 27 28 chr2 58020274 58020652 -195235931 + L1M1 LINE L1 5662 6043 -1522 2153 89 3 36 chr2 58021336 58021638 -195234945 + AluSc SINE Alu 1 292 -17 2028 131 77 3 chr2 58022663 58022999 -195233584 - MER46B DNA MER2_type 0 236 1 2518 67 0 10 chr2 58023369 58023683 -195232900 - AluY SINE Alu 0 311 1 825 134 0 8 chr2 58024519 58024670 -195231913 - FLAM_C SINE Alu 0 150 1 2237 96 4 0 chr2 58024680 58025006 -195231577 - AluSx SINE Alu 0 327 1 718 186 0 8 chr2 58025386 58025504 -195231079 - FLAM_C SINE Alu -16 117 1 2435 78 0 3 chr2 58025730 58026037 -195230546 + AluY SINE Alu 1 306 -5 272 277 323 17 chr2 58026065 58026300 -195230283 - L3 LINE CR1 -95 1482 1176 772 207 30 76 chr2 58026462 58026505 -195230078 - MER5A DNA MER1_type 0 189 146 1932 154 0 3 chr2 58026505 58026810 -195229773 + AluSx SINE Alu 1 304 -8 772 207 30 76 chr2 58026810 58026964 -195229619 - MER5A DNA MER1_type -43 146 1 998 196 140 94 chr2 58027624 58028065 -195228518 - MLT1C LTR MaLR 0 467 1 1869 167 109 49 chr2 58028244 58028693 -195227890 - MER31A LTR ERV1 -9 476 1 2242 116 0 0 chr2 58028738 58029041 -195227542 + AluSg SINE Alu 1 303 -7 1036 138 24 21 chr2 58029207 58029421 -195227162 + L1MB4 LINE L1 5644 5853 -327 284 282 18 0 chr2 58029469 58029579 -195227004 - L1MEc LINE L1 -4964 1346 1235 342 254 35 44 chr2 58029799 58029913 -195226670 - L1MEc LINE L1 -4923 1196 1084 * 577 209 105 7 chr2 58029908 58030061 -195226522 - L1MB7 LINE L1 0 6184 6017 2087 88 9 60 chr2 58030504 58030821 -195225762 + AluSq SINE Alu 1 301 -12 1488 164 66 24 chr2 58031038 58031325 -195225258 - AluJo SINE Alu -3 309 11 956 144 0 7 chr2 58031379 58031518 -195225065 + AluJo SINE Alu 2 139 -173 1159 176 5 5 chr2 58031520 58031719 -195224864 + AluJb SINE Alu 97 295 -17 1959 135 13 35 chr2 58031747 58032065 -195224518 + AluJo SINE Alu 1 311 -1 297 0 0 0 chr2 58032065 58032098 -195224485 + (TA)n Simple_repeat Simple_repeat 2 34 0 21 89 0 0 chr2 58033239 58033295 -195223288 + AT_rich Low_complexity Low_complexity 1 56 0 555 231 44 100 chr2 58033930 58034067 -195222516 + MER102a DNA MER1_type 92 210 -1207 222 105 0 0 chr2 58034067 58034105 -195222478 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 555 231 44 100 chr2 58034105 58034218 -195222365 + MER102a DNA MER1_type 210 328 -2 774 200 8 0 chr2 58034417 58034547 -195222036 - FLAM_C SINE Alu -2 131 1 1777 166 7 7 chr2 58036207 58036496 -195220087 + AluJo SINE Alu 1 289 -23 22 0 0 0 chr2 58037028 58037050 -195219533 + AT_rich Low_complexity Low_complexity 1 22 0 2459 46 13 7 chr2 58037152 58037456 -195219127 + AluSp SINE Alu 2 307 -6 29 47 0 0 chr2 58037741 58037784 -195218799 + AT_rich Low_complexity Low_complexity 1 43 0 22 80 0 0 chr2 58037927 58037977 -195218606 + GC_rich Low_complexity Low_complexity 1 50 0 2399 64 0 3 chr2 58038314 58038609 -195217974 - AluSg SINE Alu -16 294 1 2392 67 3 3 chr2 58040424 58040724 -195215859 + AluY SINE Alu 1 300 -11 241 323 25 25 chr2 58040962 58041088 -195215495 - L1MB7 LINE L1 -262 5859 5731 1822 147 7 7 chr2 58041088 58041374 -195215209 - AluSx SINE Alu -26 286 1 241 323 25 25 chr2 58041374 58041408 -195215175 - L1MB7 LINE L1 -389 5732 5699 530 266 32 39 chr2 58041676 58041830 -195214753 - L2 LINE L2 0 3313 3161 2406 95 0 0 chr2 58041841 58042147 -195214436 + AluSg SINE Alu 3 308 -2 200 281 52 59 chr2 58042204 58042339 -195214244 + L2 LINE L2 2744 2877 -437 192 304 47 108 chr2 58042564 58042778 -195213805 + L2 LINE L2 3072 3272 0 207 0 0 0 chr2 58042911 58042934 -195213649 + (TTCA)n Simple_repeat Simple_repeat 4 26 0 1327 259 80 54 chr2 58043163 58043311 -195213272 - L2 LINE L2 0 3313 3170 2036 161 0 3 chr2 58043311 58043622 -195212961 + AluSx SINE Alu 3 312 0 1327 259 80 54 chr2 58043622 58043996 -195212587 - L2 LINE L2 -143 3170 2794 350 286 0 0 chr2 58043996 58044066 -195212517 - MER91A DNA MER1_type 0 196 127 2980 228 121 30 chr2 58044128 58044233 -195212350 - L2 LINE L2 -522 2792 2698 2286 96 7 0 chr2 58044233 58044534 -195212049 + AluSp SINE Alu 1 303 -10 2980 228 121 30 chr2 58044534 58045372 -195211211 - L2 LINE L2 -616 2698 1763 2381 83 3 0 chr2 58045410 58045711 -195210872 + AluSq SINE Alu 1 302 -11 1753 152 7 3 chr2 58048073 58048362 -195208221 - AluSx SINE Alu -14 298 9 209 200 15 77 chr2 58048386 58048451 -195208132 + MIR SINE MIR 183 243 -19 850 177 63 6 chr2 58048698 58048856 -195207727 - AluJb SINE Alu -10 302 136 466 177 25 0 chr2 58048850 58048929 -195207654 - AluS SINE Alu -221 92 12 * 329 182 0 0 chr2 58050315 58050370 -195206213 - MER20 DNA MER1_type -5 214 160 884 222 152 16 chr2 58050371 58050614 -195205969 + AluJo SINE Alu 21 296 -16 2423 109 0 0 chr2 58052079 58052391 -195204192 - AluSx SINE Alu 0 312 1 25 0 0 0 chr2 58052490 58052515 -195204068 + AT_rich Low_complexity Low_complexity 1 25 0 1204 177 114 0 chr2 58052520 58052757 -195203826 - AluJo SINE Alu -48 264 1 2478 63 3 3 chr2 58052830 58053131 -195203452 - AluSp SINE Alu -12 301 1 1644 219 75 31 chr2 58053385 58053948 -195202635 + L1MC4 LINE L1 7468 7995 0 30 27 0 0 chr2 58054046 58054083 -195202500 + AT_rich Low_complexity Low_complexity 1 37 0 2335 76 7 0 chr2 58054739 58055029 -195201554 + AluSq SINE Alu 1 292 -21 194 302 75 0 chr2 58055164 58055217 -195201366 - L2 LINE L2 -3 3269 3213 2243 114 0 16 chr2 58055576 58055892 -195200691 + AluSx SINE Alu 1 311 -1 2082 139 0 0 chr2 58056001 58056295 -195200288 + AluSq SINE Alu 1 294 -19 2071 119 26 7 chr2 58056306 58056608 -195199975 + AluSx SINE Alu 1 308 -4 479 227 23 0 chr2 58058834 58058922 -195197661 + FLAM_A SINE Alu 1 90 -52 505 164 0 70 chr2 58058944 58059072 -195197511 + L1MB2 LINE L1 5710 5828 -340 815 146 0 23 chr2 58059073 58059203 -195197380 + AluJo/FLAM SINE Alu 1 127 -175 2319 109 0 6 chr2 58059205 58059516 -195197067 + AluSx SINE Alu 1 309 -3 1494 180 30 33 chr2 58059527 58059681 -195196902 + L1MB2 LINE L1 5812 5965 -206 2145 122 3 10 chr2 58059681 58059992 -195196591 + AluSq SINE Alu 2 310 -3 1494 180 30 33 chr2 58059992 58060198 -195196385 + L1MB2 LINE L1 5965 6171 0 181 319 11 32 chr2 58061323 58061417 -195195166 - MIR SINE MIR -56 206 115 * 430 314 82 31 chr2 58061401 58061560 -195195023 + MIR3 SINE MIR 14 180 -28 2143 112 20 3 chr2 58061713 58062008 -195194575 + AluSx SINE Alu 1 300 -12 183 42 0 0 chr2 58062022 58062046 -195194537 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1713 186 7 0 chr2 58062337 58062627 -195193956 - AluSx SINE Alu -20 292 1 1332 202 0 12 chr2 58063292 58063539 -195193044 + AluJo SINE Alu 1 244 -68 2249 100 0 3 chr2 58064248 58064539 -195192044 + AluSx SINE Alu 1 290 -22 1116 177 60 30 chr2 58064553 58064785 -195191798 + MER8 DNA MER2_type 1 239 0 225 219 125 0 chr2 58065011 58065075 -195191508 + L2 LINE L2 3237 3308 -5 2416 86 20 0 chr2 58065272 58065576 -195191007 + AluSq SINE Alu 1 310 -3 457 273 6 29 chr2 58065930 58066102 -195190481 + C-rich Low_complexity Low_complexity 5 172 0 408 239 0 0 chr2 58066385 58066576 -195190007 + C-rich Low_complexity Low_complexity 1 191 0 302 225 150 0 chr2 58066664 58066744 -195189839 + L1MC4 LINE L1 6612 6703 -1339 323 256 128 44 chr2 58066780 58066960 -195189623 + L1ME4a LINE L1 5710 5904 -217 1240 159 0 44 chr2 58066999 58067226 -195189357 + AluJo SINE Alu 84 300 -12 2229 108 3 0 chr2 58067417 58067714 -195188869 + AluY SINE Alu 1 298 -13 23 0 0 0 chr2 58067923 58067946 -195188637 + AT_rich Low_complexity Low_complexity 1 23 0 2334 92 26 0 chr2 58068213 58068518 -195188065 + AluSq SINE Alu 1 313 0 278 213 0 13 chr2 58069003 58069078 -195187505 + CT-rich Low_complexity Low_complexity 3 76 0 1306 107 0 0 chr2 58069090 58069259 -195187324 - AluSx SINE Alu -143 169 1 412 277 132 71 chr2 58069553 58069849 -195186734 + L1ME4a LINE L1 5267 5580 -2228 371 61 0 0 chr2 58069909 58069958 -195186625 - MADE1 DNA Mariner 0 80 32 1715 121 110 0 chr2 58069965 58070238 -195186345 + AluSx SINE Alu 1 303 -9 397 273 132 45 chr2 58070299 58070454 -195186129 + L1ME4a LINE L1 5845 6030 -91 7647 72 14 8 chr2 58070454 58071418 -195185165 + LTR5 LTR ERVK 1 969 0 397 273 132 45 chr2 58071418 58071504 -195185079 + L1ME4a LINE L1 6030 6107 -14 4362 63 28 0 chr2 58071941 58072516 -195184067 - LTR10C LTR ERV1 0 591 1 787 138 8 8 chr2 58072760 58072890 -195183693 - FLAM_C SINE Alu -3 130 1 1688 163 21 0 chr2 58072919 58073208 -195183375 + AluJb SINE Alu 1 295 -17 2037 101 16 50 chr2 58074183 58074501 -195182082 - AluSq SINE Alu -6 307 1 2098 114 7 0 chr2 58075775 58076065 -195180518 - AluSq SINE Alu -21 292 1 1453 189 42 14 chr2 58076324 58076610 -195179973 + AluJo SINE Alu 1 294 -18 2187 110 0 38 chr2 58076868 58077186 -195179397 + AluSx SINE Alu 1 306 -6 753 101 18 0 chr2 58077198 58077307 -195179276 + HY1 scRNA scRNA 1 111 -1 1366 190 63 11 chr2 58077371 58077639 -195178944 + AluJb SINE Alu 1 282 -30 460 125 0 0 chr2 58077698 58077762 -195178821 + AluSg/x SINE Alu 130 193 -117 2379 82 0 0 chr2 58077868 58078162 -195178421 - AluSc SINE Alu -15 294 1 206 190 152 51 chr2 58078669 58078748 -195177835 - MIR3 SINE MIR -32 176 90 384 77 0 0 chr2 58080925 58080977 -195175606 + (GA)n Simple_repeat Simple_repeat 1 52 0 1898 131 64 0 chr2 58083769 58084051 -195172532 + AluSg SINE Alu 1 300 -10 22 0 0 0 chr2 58086113 58086135 -195170448 + AT_rich Low_complexity Low_complexity 1 22 0 361 220 170 0 chr2 58087911 58088011 -195168572 + L2 LINE L2 3197 3313 0 21 0 0 0 chr2 58088024 58088045 -195168538 + AT_rich Low_complexity Low_complexity 1 21 0 2053 105 41 3 chr2 58088075 58088369 -195168214 + AluSg SINE Alu 1 305 -5 732 53 65 12 chr2 58088439 58088609 -195167974 + (TA)n Simple_repeat Simple_repeat 2 180 0 1312 119 0 0 chr2 58088616 58088793 -195167790 - AluSg/x SINE Alu -18 292 116 735 54 71 0 chr2 58088901 58089069 -195167514 + (TA)n Simple_repeat Simple_repeat 1 180 0 2265 102 0 0 chr2 58089087 58089381 -195167202 - AluSx SINE Alu -18 294 1 332 80 0 0 chr2 58090033 58090083 -195166500 - HY3 scRNA scRNA -1 100 51 1425 151 4 40 chr2 58090295 58090567 -195166016 + AluJb SINE Alu 49 310 -2 2165 109 0 13 chr2 58090581 58090883 -195165700 + AluSx SINE Alu 1 298 -14 2276 96 0 0 chr2 58092183 58092474 -195164109 - AluSx SINE Alu -21 291 1 24 53 0 0 chr2 58092511 58092549 -195164034 + AT_rich Low_complexity Low_complexity 1 38 0 2346 62 42 0 chr2 58095041 58095330 -195161253 - AluSp SINE Alu -12 301 1 1905 122 37 10 chr2 58095686 58095980 -195160603 + AluJo SINE Alu 11 312 0 1502 157 15 83 chr2 58097216 58097540 -195159043 + AluJo SINE Alu 1 302 -10 2350 102 0 3 chr2 58097559 58097864 -195158719 - AluY SINE Alu -7 304 1 219 232 0 0 chr2 58098097 58098153 -195158430 + (TA)n Simple_repeat Simple_repeat 1 56 0 1979 128 35 7 chr2 58098236 58098525 -195158058 - AluSx SINE Alu -15 297 1 2261 82 20 0 chr2 58099009 58099303 -195157280 - AluSp SINE Alu -13 300 1 725 139 23 47 chr2 58099306 58099435 -195157148 - AluJo/FLAM SINE Alu -176 126 1 748 239 7 7 chr2 58099447 58099602 -195156981 - FRAM SINE Alu -11 155 1 1613 98 169 4 chr2 58099626 58099881 -195156702 - AluSx SINE Alu -2 300 4 21 36 0 0 chr2 58101523 58101551 -195155032 + AT_rich Low_complexity Low_complexity 1 28 0 1729 181 27 0 chr2 58101949 58102241 -195154342 + AluSx SINE Alu 1 300 -12 285 344 125 6 chr2 58103135 58103295 -195153288 - MIR SINE MIR -64 198 20 356 342 76 69 chr2 58103551 58103984 -195152599 + L2 LINE L2 2828 3263 -9 348 293 95 17 chr2 58104585 58104701 -195151882 + MIR SINE MIR 122 246 -16 2247 97 14 0 chr2 58104726 58105016 -195151567 - AluSp SINE Alu -18 295 2 196 254 169 0 chr2 58105272 58105331 -195151252 - MER5A DNA MER1_type -57 132 64 792 231 55 8 chr2 58105546 58105849 -195150734 + MLT1H LTR MaLR 1 351 -198 2270 107 0 0 chr2 58106054 58106354 -195150229 - AluSx SINE Alu -12 300 1 701 226 21 38 chr2 58106359 58106545 -195150038 - L1ME3A LINE L1 -44 6126 5944 391 338 39 17 chr2 58106947 58107178 -195149405 - L1M4b LINE L1 -6613 246 11 1322 210 3 69 chr2 58108093 58108384 -195148199 + AluJo SINE Alu 11 282 -30 2245 113 3 0 chr2 58108392 58108684 -195147899 - AluSx SINE Alu -19 293 1 180 111 0 0 chr2 58108784 58108811 -195147772 + (TA)n Simple_repeat Simple_repeat 2 28 0 24 53 0 0 chr2 58108816 58108854 -195147729 + AT_rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr2 58109135 58109158 -195147425 + AT_rich Low_complexity Low_complexity 1 23 0 225 178 0 0 chr2 58109682 58109727 -195146856 + (TA)n Simple_repeat Simple_repeat 1 45 0 26 0 0 0 chr2 58110309 58110335 -195146248 + AT_rich Low_complexity Low_complexity 1 26 0 376 309 91 94 chr2 58112297 58112477 -195144106 + L1ME LINE L1 5360 5540 -2268 2014 155 3 0 chr2 58112477 58112781 -195143802 + AluJb SINE Alu 1 305 -7 376 309 91 94 chr2 58112781 58112907 -195143676 + L1ME LINE L1 5540 5665 -2143 2229 88 3 3 chr2 58112923 58113218 -195143365 + AluY SINE Alu 5 299 -12 309 226 18 20 chr2 58113218 58113357 -195143226 + L1ME LINE L1 5738 5818 -303 434 308 227 22 chr2 58113708 58114029 -195142554 - L2 LINE L2 -8 3305 2919 26 0 0 0 chr2 58114342 58114368 -195142215 + AT_rich Low_complexity Low_complexity 1 26 0 2154 107 0 3 chr2 58115371 58115661 -195140922 - AluSx SINE Alu -23 289 1 24 32 0 0 chr2 58115810 58115841 -195140742 + AT_rich Low_complexity Low_complexity 1 31 0 599 244 154 21 chr2 58115883 58116293 -195140290 - L1ME2 LINE L1 -2 6231 5661 2218 130 0 0 chr2 58116293 58116594 -195139989 - AluSx SINE Alu -11 301 1 599 244 154 21 chr2 58116594 58116712 -195139871 - L1ME2 LINE L1 -572 5661 5560 1919 224 110 21 chr2 58116716 58117839 -195138744 - L1ME2 LINE L1 -1486 4729 3707 779 159 0 8 chr2 58117839 58117965 -195138618 - FLAM_C SINE Alu -8 125 1 1919 224 110 21 chr2 58117965 58118143 -195138440 - L1ME2 LINE L1 -2508 3707 1967 2090 111 0 27 chr2 58118221 58118518 -195138065 - AluSx SINE Alu -23 289 1 212 0 36 0 chr2 58118677 58118705 -195137878 + (TTTTG)n Simple_repeat Simple_repeat 4 32 0 2301 71 4 0 chr2 58120392 58120711 -195135872 - AluSp SINE Alu 0 321 2 2180 115 0 3 chr2 58121408 58121703 -195134880 - AluSx SINE Alu -18 294 1 2218 89 3 10 chr2 58121996 58122289 -195134294 - AluSp SINE Alu -22 291 1 352 163 43 11 chr2 58122425 58122517 -195134066 + L1MC5 LINE L1 7103 7197 -764 273 240 212 41 chr2 58122651 58122797 -195133786 + MIR SINE MIR 47 217 -45 670 302 35 9 chr2 58123378 58123634 -195132949 + MIR SINE MIR 5 262 0 21 36 0 0 chr2 58123675 58123703 -195132880 + AT_rich Low_complexity Low_complexity 1 28 0 1011 113 0 0 chr2 58123760 58123893 -195132690 + AluSq/x SINE Alu 1 133 -179 2298 112 0 0 chr2 58123898 58124202 -195132381 + AluSg SINE Alu 1 304 -6 23 33 0 0 chr2 58125338 58125368 -195131215 + AT_rich Low_complexity Low_complexity 1 30 0 913 176 60 0 chr2 58125567 58125749 -195130834 + MER82 DNA MER2_type 12 204 -449 297 103 52 26 chr2 58125749 58125865 -195130718 + (TA)n Simple_repeat Simple_repeat 2 120 0 1929 203 25 27 chr2 58125865 58126238 -195130345 + MER82 DNA MER2_type 196 569 -84 2090 134 7 0 chr2 58126238 58126537 -195130046 - AluSq SINE Alu -11 302 2 1929 203 25 27 chr2 58126537 58126601 -195129982 + MER82 DNA MER2_type 569 632 -21 309 89 0 0 chr2 58126647 58126692 -195129891 + (CA)n Simple_repeat Simple_repeat 2 46 0 27 0 0 0 chr2 58126762 58126789 -195129794 + AT_rich Low_complexity Low_complexity 1 27 0 2341 73 17 0 chr2 58126789 58127078 -195129505 + AluSg SINE Alu 1 294 -16 1594 173 40 11 chr2 58127078 58127356 -195129227 - AluJo SINE Alu -22 290 5 2167 118 7 3 chr2 58127561 58127865 -195128718 + AluSx SINE Alu 1 305 -7 1277 194 191 35 chr2 58127911 58128151 -195128432 + MER63B DNA MER1_type 1 202 -860 1692 174 20 20 chr2 58128151 58128455 -195128128 - AluJb SINE Alu -8 304 1 1277 194 191 35 chr2 58128455 58128591 -195127992 + MER63B DNA MER1_type 202 436 0 2062 117 13 37 chr2 58128750 58128893 -195127690 + AluSq SINE Alu 1 146 -167 2313 115 0 0 chr2 58128893 58129197 -195127386 + AluSx SINE Alu 1 304 -8 2062 117 13 37 chr2 58129197 58129353 -195127230 + AluSq SINE Alu 146 293 -20 333 129 48 0 chr2 58129878 58129940 -195126643 + L1MC5 LINE L1 7696 7760 -201 1990 159 3 0 chr2 58130027 58130316 -195126267 + AluSx SINE Alu 2 291 -21 2405 83 3 3 chr2 58130481 58130783 -195125800 + AluSp SINE Alu 1 302 -11 418 249 82 0 chr2 58130924 58131102 -195125481 + MIR SINE MIR 15 180 -82 24 0 0 0 chr2 58131301 58131325 -195125258 + AT_rich Low_complexity Low_complexity 1 24 0 1848 57 0 9 chr2 58131352 58131579 -195125004 - AluY SINE Alu -14 297 73 827 71 150 0 chr2 58131905 58132018 -195124565 - AluY SINE Alu -181 130 1 2095 127 0 6 chr2 58132070 58132385 -195124198 + AluSq SINE Alu 1 313 0 1963 148 36 10 chr2 58132404 58132708 -195123875 + AluJb SINE Alu 1 312 0 2274 100 0 37 chr2 58133279 58133465 -195123118 - AluSg SINE Alu -1 309 138 2282 123 0 0 chr2 58133465 58133774 -195122809 - AluSg SINE Alu -1 309 1 2274 100 0 37 chr2 58133774 58133908 -195122675 - AluSg SINE Alu -172 138 1 1119 135 0 0 chr2 58134213 58134376 -195122207 + AluSg/x SINE Alu 139 301 -11 257 289 41 72 chr2 58134655 58134752 -195121831 - L2 LINE L2 -10 3303 3210 1613 181 13 40 chr2 58134981 58135280 -195121303 - AluJb SINE Alu -21 291 1 2340 113 0 0 chr2 58135708 58136018 -195120565 + AluSq SINE Alu 1 310 -3 213 361 131 0 chr2 58136035 58136165 -195120418 - L2 LINE L2 -15 3257 3111 1505 170 55 27 chr2 58136533 58136863 -195119720 - MER2 DNA MER2_type -1 344 6 2200 104 3 7 chr2 58136989 58137286 -195119297 + AluSx SINE Alu 1 296 -16 219 158 53 0 chr2 58137422 58137479 -195119104 + (TA)n Simple_repeat Simple_repeat 2 61 0 2217 123 0 7 chr2 58137602 58137911 -195118672 - AluSx SINE Alu -5 307 1 2230 92 7 7 chr2 58138006 58138300 -195118283 - AluSq SINE Alu -19 294 1 217 345 25 17 chr2 58138358 58138477 -195118106 + MIR SINE MIR 16 135 -73 22 0 0 0 chr2 58138480 58138502 -195118081 + AT_rich Low_complexity Low_complexity 1 22 0 2303 84 7 0 chr2 58138812 58139108 -195117475 + AluSx SINE Alu 1 298 -14 730 246 34 13 chr2 58139386 58139570 -195117013 - MIR3 SINE MIR -17 191 3 466 170 14 28 chr2 58140290 58140431 -195116152 + CT-rich Low_complexity Low_complexity 2 140 0 406 249 63 97 chr2 58140808 58140957 -195115626 + MIR SINE MIR 34 186 -76 2219 103 3 0 chr2 58140957 58141258 -195115325 - AluSp SINE Alu -9 304 3 1730 107 111 15 chr2 58141262 58141533 -195115050 - AluSx SINE Alu -15 297 1 406 249 63 97 chr2 58141533 58141615 -195114968 + MIR SINE MIR 189 262 0 3913 35 29 19 chr2 58141853 58142018 -195114565 + LTR2B LTR ERV1 1 163 -327 2323 61 0 17 chr2 58142018 58142355 -195114228 + AluY SINE Alu 1 311 0 3913 35 29 19 chr2 58142355 58142674 -195113909 + LTR2B LTR ERV1 163 490 0 1846 124 57 11 chr2 58142810 58143092 -195113491 - AluSx SINE Alu -17 295 1 3052 158 65 42 chr2 58143466 58143664 -195112919 + L1MD3 LINE L1 6882 7074 -921 486 0 0 0 chr2 58143664 58143718 -195112865 + (TA)n Simple_repeat Simple_repeat 1 54 0 359 202 0 36 chr2 58143721 58143805 -195112778 + MLT1F1 LTR MaLR 45 125 -442 1980 107 42 3 chr2 58143806 58144095 -195112488 + AluSg SINE Alu 1 300 -10 3052 158 65 42 chr2 58144095 58144679 -195111904 + L1MD3 LINE L1 7074 7989 -6 2358 93 3 0 chr2 58144679 58144979 -195111604 + AluSp SINE Alu 2 302 -11 1747 173 18 3 chr2 58145002 58145285 -195111298 + AluJo SINE Alu 1 287 -25 894 153 0 0 chr2 58145285 58145448 -195111135 + GA-rich Low_complexity Low_complexity 1 163 0 2008 120 0 4 chr2 58145493 58145790 -195110793 + AluSx SINE Alu 11 306 0 1920 153 20 3 chr2 58145876 58146171 -195110412 + AluSx SINE Alu 1 300 -12 270 176 0 0 chr2 58146238 58146289 -195110294 + (TATATG)n Simple_repeat Simple_repeat 4 54 0 329 281 11 0 chr2 58146289 58146378 -195110205 - L1MC4 LINE L1 -1339 6703 6614 1809 111 93 0 chr2 58146580 58146850 -195109733 + AluSq SINE Alu 1 295 -18 201 365 0 24 chr2 58147119 58147204 -195109379 + L2 LINE L2 2594 2676 -638 276 336 29 19 chr2 58147229 58147333 -195109250 + L2 LINE L2 2925 3029 -243 183 259 93 0 chr2 58147516 58147570 -195109013 + L2 LINE L2 3250 3308 -5 23 0 0 0 chr2 58147892 58147915 -195108668 + AT_rich Low_complexity Low_complexity 1 23 0 2410 88 0 10 chr2 58148481 58148786 -195107797 - AluSp SINE Alu -11 302 1 511 250 76 52 chr2 58149858 58150030 -195106553 + MIR SINE MIR 28 203 -59 228 276 69 0 chr2 58150082 58150140 -195106443 + MIR SINE MIR 200 261 -1 22 0 0 0 chr2 58150410 58150432 -195106151 + AT_rich Low_complexity Low_complexity 1 22 0 1542 170 42 45 chr2 58152243 58152531 -195104052 + AluJo SINE Alu 7 293 -19 189 271 0 0 chr2 58152543 58152591 -195103992 + MIR SINE MIR 98 145 -63 29 47 0 0 chr2 58152863 58152906 -195103677 + AT_rich Low_complexity Low_complexity 1 43 0 1106 167 0 60 chr2 58153955 58154170 -195102413 + AluJb SINE Alu 85 286 -26 237 65 0 0 chr2 58154180 58154211 -195102372 + (TAA)n Simple_repeat Simple_repeat 2 32 0 384 141 56 0 chr2 58154681 58154752 -195101831 + MER5A DNA MER1_type 1 75 -114 1174 192 22 99 chr2 58154894 58155259 -195101324 + L1MC5 LINE L1 6693 7029 -932 2044 115 0 13 chr2 58155281 58155585 -195100998 - AluSx SINE Alu -12 300 1 254 204 117 29 chr2 58155585 58155688 -195100895 + L1MC5 LINE L1 7817 7928 -33 1731 146 46 13 chr2 58156140 58156442 -195100141 - AluJo SINE Alu 0 312 1 25 31 0 0 chr2 58156886 58156918 -195099665 + AT_rich Low_complexity Low_complexity 1 32 0 2879 161 16 38 chr2 58157188 58157457 -195099126 - L1MA8 LINE L1 -192 6099 5825 2166 86 30 13 chr2 58157457 58157760 -195098823 - AluSc SINE Alu 0 309 2 2879 161 16 38 chr2 58157760 58157773 -195098810 - L1MA8 LINE L1 -466 5825 5813 2163 119 0 0 chr2 58157773 58158066 -195098517 - AluSg SINE Alu -17 293 1 2879 161 16 38 chr2 58158066 58158355 -195098228 - L1MA8 LINE L1 -478 5813 5540 467 225 51 29 chr2 58158693 58158831 -195097752 - MIR SINE MIR 0 262 122 332 345 109 0 chr2 58159100 58159210 -195097373 + L2 LINE L2 3148 3269 -3 25 0 0 0 chr2 58161305 58161330 -195095253 + AT_rich Low_complexity Low_complexity 1 25 0 2159 111 17 0 chr2 58161722 58162020 -195094563 - AluSx SINE Alu -9 303 1 30 0 0 0 chr2 58162663 58162693 -195093890 + AT_rich Low_complexity Low_complexity 1 30 0 312 139 56 93 chr2 58162716 58162733 -195093850 + L1MB7 LINE L1 6079 6095 -89 2188 102 0 0 chr2 58162733 58163043 -195093540 - AluSq SINE Alu 0 310 1 312 139 56 93 chr2 58163043 58163132 -195093451 + L1MB7 LINE L1 6095 6182 -2 1679 158 45 107 chr2 58163586 58163930 -195092653 + Charlie1b DNA MER1_type 2 366 -2395 2030 148 0 10 chr2 58163930 58164235 -195092348 - AluSx SINE Alu -10 302 1 1679 158 45 107 chr2 58164235 58164291 -195092292 + Charlie1b DNA MER1_type 366 424 -2337 1738 165 10 10 chr2 58164291 58164588 -195091995 - AluJb SINE Alu -15 297 1 1679 158 45 107 chr2 58164588 58164600 -195091983 + Charlie1b DNA MER1_type 424 435 -2326 2233 95 0 3 chr2 58164600 58164896 -195091687 - AluSg SINE Alu -15 295 1 1679 158 45 107 chr2 58164896 58165020 -195091563 + Charlie1b DNA MER1_type 435 509 -14 224 319 14 0 chr2 58166164 58166236 -195090347 + CT-rich Low_complexity Low_complexity 2 74 0 2009 93 43 0 chr2 58166262 58166540 -195090043 - AluSx SINE Alu -22 290 1 206 359 105 0 chr2 58166666 58166847 -195089736 + L2 LINE L2 1632 1831 -1483 219 156 78 0 chr2 58166919 58166996 -195089587 + (TA)n Simple_repeat Simple_repeat 2 84 0 1732 153 29 0 chr2 58167001 58167275 -195089308 - AluJo SINE Alu -30 282 1 598 256 31 0 chr2 58167429 58167558 -195089025 - FLAM_A SINE Alu 0 133 1 269 176 0 20 chr2 58167608 58167659 -195088924 - Tigger4(Zombi) DNA MER2_type 0 2731 2682 1749 155 13 19 chr2 58167659 58167969 -195088614 - AluJo SINE Alu -4 308 1 326 175 0 0 chr2 58167970 58168027 -195088556 - L1MB4 LINE L1 -39 6141 6085 2794 151 4 49 chr2 58168055 58168474 -195088109 + L1MB7 LINE L1 5655 6045 -139 2106 121 13 0 chr2 58168474 58168780 -195087803 + AluSg SINE Alu 1 310 0 2794 151 4 49 chr2 58168780 58168910 -195087673 + L1MB7 LINE L1 6045 6179 -5 25 0 0 0 chr2 58169519 58169544 -195087039 + AT_rich Low_complexity Low_complexity 1 25 0 180 0 0 0 chr2 58169973 58169993 -195086590 + (A)n Simple_repeat Simple_repeat 1 20 0 1794 174 54 120 chr2 58170179 58170467 -195086116 - MER7C DNA MER2_type -2426 602 297 2171 92 35 0 chr2 58170467 58170749 -195085834 - AluSx SINE Alu -15 297 6 1794 174 54 120 chr2 58170749 58170886 -195085697 - MER7C DNA MER2_type -2731 297 153 2187 95 0 10 chr2 58170886 58171190 -195085393 - AluSx SINE Alu -11 301 1 1794 174 54 120 chr2 58171190 58171407 -195085176 - MER7C DNA MER2_type -2875 153 1 21 0 0 0 chr2 58171660 58171681 -195084902 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr2 58172308 58172331 -195084252 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 3012 94 14 0 chr2 58172334 58172759 -195083824 - L1PA10 LINE L1 -20 6148 5718 488 182 93 117 chr2 58172893 58172971 -195083612 - MER3 DNA MER1_type 0 209 131 1704 122 95 8 chr2 58172971 58173253 -195083330 + AluSx SINE Alu 1 305 0 488 182 93 117 chr2 58173253 58173387 -195083196 - MER3 DNA MER1_type -78 131 1 233 303 152 15 chr2 58173429 58173561 -195083022 - MIR3 SINE MIR -36 172 23 363 189 0 38 chr2 58173634 58173740 -195082843 + CT-rich Low_complexity Low_complexity 1 102 0 296 357 31 8 chr2 58174562 58174691 -195081892 - MIR3 SINE MIR -67 141 10 199 319 106 43 chr2 58174749 58174956 -195081627 + L2 LINE L2 1190 1409 -1905 219 200 0 29 chr2 58175913 58175983 -195080600 + (TA)n Simple_repeat Simple_repeat 2 69 0 25 31 0 0 chr2 58176005 58176037 -195080546 + AT_rich Low_complexity Low_complexity 1 32 0 252 0 0 0 chr2 58176181 58176209 -195080374 + (CAAAAA)n Simple_repeat Simple_repeat 5 32 0 277 211 35 0 chr2 58176337 58176394 -195080189 + MIR SINE MIR 87 145 -117 22 35 0 0 chr2 58178698 58178727 -195077856 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr2 58178761 58178784 -195077799 + AT_rich Low_complexity Low_complexity 1 23 0 285 221 17 151 chr2 58180359 58180531 -195076052 - MIR SINE MIR -77 185 37 26 0 0 0 chr2 58180809 58180835 -195075748 + AT_rich Low_complexity Low_complexity 1 26 0 949 172 35 0 chr2 58181928 58182097 -195074486 + MER3 DNA MER1_type 35 209 0 2110 107 0 4 chr2 58182331 58182611 -195073972 + AluSx SINE Alu 1 279 -33 483 18 0 0 chr2 58182611 58182667 -195073916 + (CA)n Simple_repeat Simple_repeat 1 56 0 2886 143 26 18 chr2 58183013 58183509 -195073074 + L1MB3 LINE L1 5663 6162 -21 818 168 94 0 chr2 58183618 58183767 -195072816 - FAM SINE Alu -5 44 1 230 136 23 0 chr2 58184538 58184582 -195072001 + CT-rich Low_complexity Low_complexity 2 46 0 745 184 0 0 chr2 58184600 58184725 -195071858 - FLAM_C SINE Alu -18 125 1 2160 115 7 0 chr2 58185138 58185434 -195071149 - AluSx SINE Alu -14 298 1 1502 154 4 24 chr2 58185551 58185804 -195070779 - AluSx SINE Alu -14 298 51 2109 132 3 0 chr2 58186457 58186760 -195069823 + AluSq SINE Alu 1 304 -9 1695 162 14 17 chr2 58186822 58187112 -195069471 + AluJb SINE Alu 1 289 -23 314 239 60 0 chr2 58187684 58187751 -195068832 - MER94 DNA DNA 0 134 64 766 155 9 0 chr2 58187765 58187881 -195068702 - AluJb SINE Alu -195 117 1 263 268 14 0 chr2 58187888 58187959 -195068624 - MER94 DNA DNA -62 72 1 204 135 81 0 chr2 58188162 58188199 -195068384 + polypyrimidine Low_complexity Low_complexity 4 43 0 22 35 0 0 chr2 58189792 58189821 -195066762 + AT_rich Low_complexity Low_complexity 1 29 0 2068 98 22 0 chr2 58190189 58190488 -195066095 + AluSq SINE Alu 3 307 0 321 263 11 11 chr2 58190999 58191094 -195065489 + L1ME3A LINE L1 6067 6161 -9 607 185 108 8 chr2 58191197 58191327 -195065256 + FLAM_C SINE Alu 1 143 0 453 66 0 0 chr2 58191565 58191626 -195064957 + (TA)n Simple_repeat Simple_repeat 1 61 0 2051 131 0 0 chr2 58191632 58191923 -195064660 - AluSx SINE Alu -21 291 1 22 0 0 0 chr2 58191923 58191945 -195064638 + AT_rich Low_complexity Low_complexity 1 22 0 2287 69 0 10 chr2 58192935 58193225 -195063358 - AluSg1 SINE Alu -20 289 3 1349 160 153 4 chr2 58193290 58193552 -195063031 - AluJo SINE Alu 0 302 2 2160 118 7 0 chr2 58193695 58194001 -195062582 - AluSg SINE Alu -2 308 1 2193 124 0 0 chr2 58194834 58195141 -195061442 - AluSx SINE Alu -5 307 1 780 216 108 0 chr2 58195555 58195740 -195060843 - L2 LINE L2 -2 3311 3107 1848 119 56 0 chr2 58195741 58196029 -195060554 + AluSp SINE Alu 1 303 0 1883 145 0 38 chr2 58196037 58196354 -195060229 + AluSx SINE Alu 1 305 -7 2087 133 3 3 chr2 58196711 58197011 -195059572 - AluSx SINE Alu -12 300 1 2009 156 42 3 chr2 58197059 58197393 -195059190 + MER7A DNA MER2_type 2 346 0 1548 147 15 19 chr2 58197404 58197669 -195058914 + AluJb SINE Alu 40 303 -9 366 351 55 5 chr2 58198887 58199089 -195057494 + L2 LINE L2 3062 3273 -40 2342 84 3 13 chr2 58199430 58199741 -195056842 + AluSq SINE Alu 1 308 -5 651 208 56 7 chr2 58200101 58200245 -195056338 + AluJo SINE Alu 85 235 -77 633 115 0 21 chr2 58200336 58200432 -195056151 + AluSg/x SINE Alu 201 294 -16 345 167 29 0 chr2 58200561 58200663 -195055920 + (TA)n Simple_repeat Simple_repeat 2 106 0 259 276 0 0 chr2 58200665 58200752 -195055831 - L1MC4 LINE L1 -1342 6700 6614 1879 153 3 0 chr2 58200761 58201049 -195055534 - AluSx SINE Alu -23 289 1 198 191 0 0 chr2 58201204 58201246 -195055337 + (CCA)n Simple_repeat Simple_repeat 1 42 0 271 40 20 40 chr2 58201473 58201523 -195055060 + (TTTTA)n Simple_repeat Simple_repeat 2 50 0 2057 124 0 0 chr2 58201527 58201809 -195054774 - AluSq SINE Alu -31 282 1 246 204 0 0 chr2 58201843 58201892 -195054691 + L1MEc LINE L1 1616 1664 -4732 2130 116 3 6 chr2 58201931 58202242 -195054341 + AluSx SINE Alu 1 310 -2 2199 123 7 0 chr2 58202537 58202847 -195053736 + AluSx SINE Alu 1 312 0 831 281 120 24 chr2 58202864 58203454 -195053129 + L1MEc LINE L1 2456 3102 -3113 314 301 36 0 chr2 58203669 58203752 -195052831 + L2 LINE L2 3226 3311 -2 35 41 0 0 chr2 58203976 58204025 -195052558 + AT_rich Low_complexity Low_complexity 1 49 0 226 368 0 11 chr2 58204570 58204665 -195051918 + L2 LINE L2 940 1033 -2281 944 204 136 55 chr2 58204680 58204800 -195051783 - Charlie1 DNA MER1_type -6 2755 2646 2233 97 20 0 chr2 58204800 58205098 -195051485 + AluSx SINE Alu 5 308 -4 944 204 136 55 chr2 58205098 58205359 -195051224 - Charlie1 DNA MER1_type -115 2646 2343 227 225 38 12 chr2 58205600 58205680 -195050903 + L1MEc LINE L1 78 159 -6237 387 321 105 19 chr2 58205702 58205864 -195050719 + L1MEc LINE L1 223 398 -5998 656 223 0 0 chr2 58205902 58206032 -195050551 + FLAM_C SINE Alu 9 138 -5 1036 296 63 33 chr2 58206042 58206822 -195049761 + L1MEc LINE L1 418 1220 -5176 736 235 57 70 chr2 58206863 58207178 -195049405 - L1MC4 LINE L1 -313 7729 7419 461 311 84 38 chr2 58207178 58207727 -195048856 - L1M4 LINE L1 -1301 4845 4272 473 311 108 46 chr2 58207781 58208106 -195048477 - L1M4 LINE L1 -1201 4945 4601 2137 112 10 26 chr2 58208317 58208630 -195047953 - AluSc SINE Alu -1 308 1 457 239 166 28 chr2 58208701 58208948 -195047635 - L1M4 LINE L1 -1898 4248 3968 874 207 35 6 chr2 58208987 58209161 -195047422 - FRAM SINE Alu -3 173 1 3876 25 0 6 chr2 58209170 58209645 -195046938 - L1PA4 LINE L1 -206 5949 5478 1767 37 0 0 chr2 58209645 58209858 -195046725 + L1PA4 LINE L1 5942 6155 0 2337 113 0 0 chr2 58209873 58210182 -195046401 - AluSx SINE Alu -3 309 1 582 218 0 32 chr2 58210191 58210315 -195046268 - FLAM_A SINE Alu -13 120 1 208 413 11 0 chr2 58210512 58210604 -195045979 + L2 LINE L2 3142 3234 -38 2499 78 0 0 chr2 58211627 58211934 -195044649 + AluY SINE Alu 3 309 -2 1056 224 24 8 chr2 58211981 58212227 -195044356 - MLT1E1 LTR MaLR 0 654 405 1441 367 3 22 chr2 58212251 58212562 -195044021 + AluSx SINE Alu 1 305 -7 2062 122 0 14 chr2 58212771 58213065 -195043518 - AluSx SINE Alu -22 290 1 29 47 0 0 chr2 58213069 58213112 -195043471 + AT_rich Low_complexity Low_complexity 1 43 0 23 68 0 0 chr2 58213529 58213573 -195043010 + AT_rich Low_complexity Low_complexity 1 44 0 21 0 0 0 chr2 58213688 58213709 -195042874 + AT_rich Low_complexity Low_complexity 1 21 0 760 190 0 6 chr2 58214301 58214561 -195042022 + AluJo SINE Alu 1 308 -4 564 243 97 15 chr2 58214658 58214917 -195041666 + HAL1 LINE L1 2101 2380 -127 2032 92 60 14 chr2 58214931 58215215 -195041368 + AluSg1 SINE Alu 1 297 -12 1657 177 10 17 chr2 58216818 58217117 -195039466 + AluJo SINE Alu 1 297 -15 207 162 0 0 chr2 58217117 58217154 -195039429 + (TA)n Simple_repeat Simple_repeat 2 38 0 241 127 0 0 chr2 58217156 58217211 -195039372 + LTR66 LTR ERVL 394 448 -162 5649 172 81 20 chr2 58217709 58218394 -195038189 - Charlie1a DNA MER1_type -1307 1454 812 2424 75 0 0 chr2 58218394 58218686 -195037897 + AluY SINE Alu 1 292 -19 5649 172 81 20 chr2 58218686 58219370 -195037213 - Charlie1a DNA MER1_type -1949 812 1 22 56 0 0 chr2 58220191 58220227 -195036356 + AT_rich Low_complexity Low_complexity 1 36 0 2088 108 10 7 chr2 58220407 58220695 -195035888 - AluSx SINE Alu -23 289 1 180 323 121 61 chr2 58220755 58220953 -195035630 + L2 LINE L2 2846 3055 -217 1585 148 151 3 chr2 58221217 58221508 -195035075 + MER1B DNA MER1_type 4 337 0 2134 113 3 10 chr2 58221544 58221844 -195034739 + AluY SINE Alu 1 298 -13 1875 150 3 17 chr2 58222141 58222441 -195034142 + AluSx SINE Alu 3 298 -14 1850 164 10 13 chr2 58222597 58222896 -195033687 + AluJb SINE Alu 1 298 -14 2103 126 0 0 chr2 58222989 58223274 -195033309 + AluSx SINE Alu 1 285 -27 216 0 0 0 chr2 58223282 58223306 -195033277 + (TAAAA)n Simple_repeat Simple_repeat 3 26 0 2288 101 0 0 chr2 58223386 58223684 -195032899 - AluSx SINE Alu -14 298 1 237 339 55 11 chr2 58223772 58223955 -195032628 + L2 LINE L2 740 930 -2384 566 167 19 0 chr2 58223975 58224083 -195032500 + MER41B LTR ERV1 3 112 -523 655 227 32 0 chr2 58224855 58225009 -195031574 - MER58A DNA MER1_type 0 159 1 1784 86 25 4 chr2 58226913 58227204 -195029379 - L1MA2 LINE L1 -255 6049 5751 23 0 0 0 chr2 58227242 58227265 -195029318 + AT_rich Low_complexity Low_complexity 1 23 0 243 103 0 0 chr2 58227836 58227875 -195028708 + (TG)n Simple_repeat Simple_repeat 2 40 0 937 191 0 34 chr2 58228311 58228489 -195028094 - AluJb SINE Alu -12 300 129 1777 118 69 28 chr2 58228498 58228787 -195027796 - AluSx SINE Alu -11 301 1 1520 117 4 8 chr2 58228862 58229102 -195027481 - L1PB1 LINE L1 -2 6149 5911 590 216 37 4 chr2 58229642 58229910 -195026673 - L1M4 LINE L1 -2408 3738 3372 2301 131 0 3 chr2 58229941 58230254 -195026329 - AluSq SINE Alu -1 312 1 5751 50 0 7 chr2 58230290 58231011 -195025572 - L1PA6 LINE L1 -1 6153 5438 315 146 0 0 chr2 58231170 58231225 -195025358 + (TA)n Simple_repeat Simple_repeat 2 56 0 1912 146 7 3 chr2 58231225 58231513 -195025070 - AluSx SINE Alu -23 289 1 231 281 42 10 chr2 58231556 58231652 -195024931 + L1MEd LINE L1 604 702 -5417 232 233 0 0 chr2 58231661 58231704 -195024879 + (CCA)n Simple_repeat Simple_repeat 1 43 0 386 317 113 5 chr2 58231704 58232087 -195024496 + L1MEd LINE L1 728 1176 -4943 2304 116 0 0 chr2 58232127 58232438 -195024145 + AluSx SINE Alu 1 311 -1 2258 102 7 0 chr2 58232498 58232792 -195023791 + AluSq SINE Alu 1 296 -17 686 191 0 0 chr2 58232876 58232986 -195023597 + FLAM_C SINE Alu 3 112 -31 2081 120 10 3 chr2 58233125 58233425 -195023158 - AluSx SINE Alu -10 302 1 883 145 7 0 chr2 58233705 58233850 -195022733 - MER58B DNA MER1_type 0 341 196 871 291 67 17 chr2 58234210 58234612 -195021971 - LTR33 LTR ERVL -49 472 51 1779 162 14 24 chr2 58234859 58235156 -195021427 - AluJb SINE Alu -18 294 1 1848 163 0 0 chr2 58235293 58235582 -195021001 + AluJb SINE Alu 1 289 -23 541 221 20 0 chr2 58235726 58235875 -195020708 - L1MD3 LINE L1 -8 7987 7836 39412 42 2 0 chr2 58235875 58240898 -195015685 + L1P LINE L1 3 5035 -1111 2084 128 10 0 chr2 58240998 58241286 -195015297 - AluSx SINE Alu -21 291 1 1221 172 27 8 chr2 58241536 58241798 -195014785 - L1MD3 LINE L1 0 7995 7729 769 182 8 0 chr2 58243230 58243362 -195013221 + FLAM_A SINE Alu 1 133 0 1981 145 22 64 chr2 58243373 58243780 -195012803 + MLT1B LTR MaLR 1 390 0 26 0 0 0 chr2 58244341 58244367 -195012216 + AT_rich Low_complexity Low_complexity 1 26 0 414 304 191 24 chr2 58244403 58244839 -195011744 + L2 LINE L2 2702 3225 -88 911 178 69 21 chr2 58245119 58245392 -195011191 - Charlie5 DNA MER1_type -27 2585 1 259 280 30 20 chr2 58245604 58245704 -195010879 + LTR67 LTR ERVL 436 536 -21 22 0 0 0 chr2 58245710 58245732 -195010851 + AT_rich Low_complexity Low_complexity 1 22 0 403 197 124 15 chr2 58246528 58246665 -195009918 + L1MC5 LINE L1 7316 7467 -494 439 320 69 35 chr2 58246731 58246856 -195009727 - LTR16A LTR ERVL 0 450 331 2215 116 3 0 chr2 58246856 58247157 -195009426 + AluSq SINE Alu 1 302 -11 439 320 69 35 chr2 58247157 58247350 -195009233 - LTR16A LTR ERVL -119 331 121 1732 165 0 26 chr2 58247416 58247719 -195008864 + AluJb SINE Alu 1 295 -17 938 287 64 33 chr2 58247994 58248353 -195008230 + L2 LINE L2 2087 2456 -858 228 271 90 18 chr2 58248353 58248519 -195008064 - L1MC5 LINE L1 -171 7790 7613 2266 121 3 0 chr2 58248536 58248843 -195007740 - AluSx SINE Alu 0 312 5 291 298 93 43 chr2 58248928 58249089 -195007494 - L2 LINE L2 -150 3163 2995 * 3131 227 98 57 chr2 58249069 58249536 -195007047 - L2 LINE L2 -1303 2011 1565 2111 85 0 34 chr2 58249536 58249853 -195006730 + AluSx SINE Alu 1 307 0 3131 227 98 57 chr2 58249853 58250480 -195006103 - L2 LINE L2 -1749 1565 871 1192 106 0 6 chr2 58250622 58250783 -195005800 + AluSq SINE Alu 5 164 -149 2486 52 3 39 chr2 58250783 58250956 -195005627 - L1PA8A LINE L1 -498 5633 5478 2279 97 10 0 chr2 58250956 58251264 -195005319 + AluSx SINE Alu 1 311 -1 2486 52 3 39 chr2 58251264 58251452 -195005131 - L1PA8A LINE L1 -653 5478 5285 2503 57 0 0 chr2 58251597 58251893 -195004690 - AluY SINE Alu -15 296 1 954 187 0 0 chr2 58252131 58252281 -195004302 + FAM SINE Alu 10 159 -26 202 28 28 28 chr2 58252285 58252321 -195004262 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 232 259 54 82 chr2 58252338 58252485 -195004098 + HAL1 LINE L1 2359 2501 -6 348 192 13 26 chr2 58253369 58253447 -195003136 + MLT1I LTR MaLR 101 177 -232 231 206 92 84 chr2 58253493 58253624 -195002959 + MLT1I LTR MaLR 259 390 -19 361 222 54 42 chr2 58253647 58253814 -195002769 + L1MEd LINE L1 34 202 -5917 2227 113 3 0 chr2 58253891 58254184 -195002399 - AluSx SINE Alu -18 294 1 469 92 0 0 chr2 58254666 58254731 -195001852 + U6 snRNA snRNA 1 65 -42 448 232 40 34 chr2 58254731 58254908 -195001675 - MER112 DNA MER1_type -82 178 1 2340 197 14 29 chr2 58255111 58255624 -195000959 - MLT1D LTR MaLR 0 505 1 26 0 0 0 chr2 58256979 58257005 -194999578 + AT_rich Low_complexity Low_complexity 1 26 0 24 32 0 0 chr2 58257136 58257167 -194999416 + AT_rich Low_complexity Low_complexity 1 31 0 2066 121 36 0 chr2 58257167 58257448 -194999135 - AluSx SINE Alu -21 291 1 374 280 7 13 chr2 58257497 58257618 -194998965 + LTR33A LTR ERVL 44 158 -363 351 214 138 13 chr2 58257757 58257916 -194998667 + LTR33A LTR ERVL 340 518 -5 519 372 84 49 chr2 58258438 58259059 -194997524 - L2 LINE L2 -1 3271 2625 5341 140 39 1 chr2 58259560 58260480 -194996103 - Tigger1 DNA MER2_type -1 2417 1463 3046 176 96 19 chr2 58260480 58261260 -194995323 + MER21B LTR ERV1 1 931 0 1749 96 19 61 chr2 58261260 58261406 -194995177 - Tigger1 DNA MER2_type -955 1463 1333 2218 100 0 0 chr2 58261406 58261709 -194994874 - AluSg SINE Alu 0 303 1 1749 96 19 61 chr2 58261709 58261871 -194994712 - Tigger1 DNA MER2_type -1085 1333 1166 4763 140 40 47 chr2 58262708 58263289 -194993294 - Tigger1 DNA MER2_type -1237 1181 608 1780 189 3 7 chr2 58263289 58263595 -194992988 + AluJb SINE Alu 7 311 -1 4763 140 40 47 chr2 58263595 58263985 -194992598 - Tigger1 DNA MER2_type -1810 608 217 482 224 0 0 chr2 58263986 58264071 -194992512 + FRAM/FAM SINE Alu 1 84 -92 243 255 0 0 chr2 58264071 58264122 -194992461 - AluJ/monomer SINE Alu -248 51 1 405 239 0 0 chr2 58264139 58264248 -194992335 + L1M4 LINE L1 3472 3580 -2566 1795 193 112 31 chr2 58264270 58264726 -194991857 + MLT1D LTR MaLR 12 504 -1 309 131 66 0 chr2 58264726 58264787 -194991796 + MER52A LTR ERV1 1 65 -1690 459 275 29 12 chr2 58264788 58264959 -194991624 + MER52A LTR ERV1 224 397 -1358 3871 156 131 189 chr2 58264962 58265976 -194990607 + MER52A LTR ERV1 216 1278 0 1600 198 22 29 chr2 58266054 58266431 -194990152 - AluJo SINE Alu 0 375 1 347 194 97 121 chr2 58266517 58266668 -194989915 - L1MC5 LINE L1 -30 7931 7787 1943 180 0 0 chr2 58266668 58266973 -194989610 - AluSx SINE Alu -7 305 1 347 194 97 121 chr2 58266973 58267069 -194989514 - L1MC5 LINE L1 -174 7787 7690 2186 128 7 0 chr2 58267149 58267454 -194989129 + AluSx SINE Alu 3 309 -3 268 192 77 13 chr2 58267578 58267656 -194988927 + L1MC4 LINE L1 7952 8034 -8 1917 121 21 3 chr2 58267723 58268013 -194988570 - AluSq SINE Alu -18 295 1 1856 148 7 23 chr2 58268054 58268358 -194988225 - AluSx SINE Alu -9 303 5 203 147 0 0 chr2 58269240 58269274 -194987309 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 888 108 8 16 chr2 58269351 58269480 -194987103 + FLAM_C SINE Alu 5 132 -11 1134 108 23 6 chr2 58269847 58270023 -194986560 - L1PB1 LINE L1 -1 6150 5972 332 292 120 35 chr2 58270179 58270521 -194986062 + L1M4 LINE L1 4312 4682 -1464 1822 149 0 49 chr2 58270563 58270871 -194985712 - AluJo SINE Alu -19 293 1 26 0 0 0 chr2 58270986 58271012 -194985571 + AT_rich Low_complexity Low_complexity 1 26 0 495 0 0 0 chr2 58271045 58271100 -194985483 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 2206 122 0 3 chr2 58271145 58271441 -194985142 + AluSx SINE Alu 1 295 -17 1452 147 0 133 chr2 58271798 58272151 -194984432 - AluJo SINE Alu -6 306 1 2037 136 0 19 chr2 58272501 58272818 -194983765 - AluJb SINE Alu -1 311 1 853 107 0 0 chr2 58273069 58273191 -194983392 - AluSc SINE Alu -5 304 183 888 160 24 58 chr2 58273618 58273688 -194982895 - MER3 DNA MER1_type 0 209 138 2125 128 3 0 chr2 58273688 58273985 -194982598 + AluSx SINE Alu 1 298 -14 888 160 24 58 chr2 58273985 58274120 -194982463 - MER3 DNA MER1_type -71 138 11 818 160 0 8 chr2 58275037 58275162 -194981421 + AluJo/FLAM SINE Alu 1 124 -188 261 115 0 39 chr2 58275163 58275215 -194981368 - Alu SINE Alu -2 299 250 2151 126 3 0 chr2 58275261 58275554 -194981029 - AluSq SINE Alu -19 294 1 1789 162 10 13 chr2 58275599 58275908 -194980675 - AluJo SINE Alu -4 308 1 323 282 81 60 chr2 58275925 58276116 -194980467 + L1ME4a LINE L1 4099 4297 -1849 2295 65 0 77 chr2 58276116 58276441 -194980142 + AluY SINE Alu 1 300 -11 323 282 81 60 chr2 58276441 58276483 -194980100 + L1ME4a LINE L1 4297 4337 -1809 343 317 71 33 chr2 58276529 58276712 -194979871 + L1ME4a LINE L1 4428 4617 -1529 471 293 103 46 chr2 58277263 58277672 -194978911 + L1ME4a LINE L1 5379 5846 -275 1792 163 3 3 chr2 58277672 58277988 -194978595 - AluJb SINE Alu 0 316 1 471 293 103 46 chr2 58277988 58278265 -194978318 + L1ME4a LINE L1 5846 6106 -15 316 186 16 113 chr2 58278475 58278669 -194977914 + Charlie7 DNA MER1_type 2437 2611 -1 22 0 0 0 chr2 58279567 58279589 -194976994 + AT_rich Low_complexity Low_complexity 1 22 0 272 279 90 18 chr2 58279794 58279905 -194976678 - L2 LINE L2 0 3272 3154 1258 187 12 32 chr2 58280183 58280307 -194976276 - Tigger5 DNA MER2_type -177 241 123 1780 136 185 19 chr2 58280307 58280674 -194975909 + MSTA LTR MaLR 1 428 0 1258 187 12 32 chr2 58280674 58280795 -194975788 - Tigger5 DNA MER2_type -295 123 1 5651 188 27 60 chr2 58280795 58281205 -194975378 + L1MB5 LINE L1 3746 4168 -2006 2401 110 0 0 chr2 58281205 58281515 -194975068 + AluSx SINE Alu 1 310 -2 5651 188 27 60 chr2 58281515 58282108 -194974475 + L1MB5 LINE L1 4168 4779 -1395 2165 138 0 0 chr2 58282108 58282419 -194974164 - AluSx SINE Alu -1 311 1 5651 188 27 60 chr2 58282419 58282458 -194974125 + L1MB5 LINE L1 4779 4818 -1356 2035 109 40 0 chr2 58282458 58282733 -194973850 + AluSg SINE Alu 1 286 -24 5651 188 27 60 chr2 58282733 58283059 -194973524 + L1MB5 LINE L1 4818 5153 -1021 2361 94 10 3 chr2 58283059 58283368 -194973215 + AluSq SINE Alu 1 311 -2 441 0 0 0 chr2 58283371 58283420 -194973163 + (TA)n Simple_repeat Simple_repeat 2 50 0 5651 188 27 60 chr2 58283420 58283583 -194973000 + L1MB5 LINE L1 5155 5322 -852 1420 193 9 52 chr2 58283583 58283909 -194972674 + AluJb SINE Alu 1 312 0 5651 188 27 60 chr2 58283909 58284048 -194972535 + L1MB5 LINE L1 5322 5464 -710 1376 176 60 39 chr2 58284048 58284332 -194972251 + AluJo SINE Alu 1 290 -22 5651 188 27 60 chr2 58284332 58285156 -194971427 + L1MB5 LINE L1 5464 6168 -6 2407 99 0 6 chr2 58285597 58285911 -194970672 - AluSx SINE Alu 0 312 1 801 265 60 105 chr2 58285974 58286509 -194970074 + MLT1J LTR MaLR 1 511 0 305 252 114 24 chr2 58286511 58286634 -194969949 - MIR SINE MIR -121 141 8 245 300 12 62 chr2 58287005 58287085 -194969498 - L2 LINE L2 0 3272 3197 1046 181 12 0 chr2 58287172 58287343 -194969240 - FAM SINE Alu -2 173 1 314 386 191 3 chr2 58287535 58287751 -194968832 + L2 LINE L2 2399 2686 -628 1488 174 44 98 chr2 58287751 58288159 -194968424 - MLT1B LTR MaLR -4 386 1 314 386 191 3 chr2 58288159 58288235 -194968348 + L2 LINE L2 2686 2746 -568 326 77 138 0 chr2 58288472 58288537 -194968046 + L1MB3 LINE L1 6078 6151 -32 708 106 0 0 chr2 58288538 58288632 -194967951 + AluS SINE Alu 1 94 -218 2162 128 0 0 chr2 58288633 58288929 -194967654 - AluSx SINE Alu -14 298 3 471 232 26 19 chr2 58289375 58289530 -194967053 + L1MC5 LINE L1 7749 7904 -57 389 308 25 25 chr2 58290050 58290209 -194966374 + MER5A DNA MER1_type 8 166 -23 * 1006 158 18 6 chr2 58290078 58290243 -194966340 - MER5A DNA MER1_type -22 167 1 272 362 37 32 chr2 58290251 58290439 -194966144 - MER5A DNA MER1_type 0 189 1 1739 156 24 17 chr2 58290590 58290879 -194965704 + AluJb SINE Alu 1 291 -21 259 333 0 0 chr2 58291028 58291115 -194965468 + L1ME LINE L1 5512 5598 -523 1714 171 7 0 chr2 58291142 58291417 -194965166 + AluJo SINE Alu 1 277 -35 274 23 47 0 chr2 58291421 58291464 -194965119 + (TA)n Simple_repeat Simple_repeat 1 45 0 2023 107 0 7 chr2 58291464 58291764 -194964819 + AluSc SINE Alu 1 298 0 34 42 0 0 chr2 58291776 58291824 -194964759 + AT_rich Low_complexity Low_complexity 1 48 0 407 129 0 29 chr2 58291843 58291913 -194964670 - AluJ/FRAM SINE Alu -13 299 232 1185 100 31 0 chr2 58291932 58292092 -194964491 - AluSx SINE Alu -144 168 4 323 314 32 0 chr2 58292105 58292261 -194964322 + L1ME LINE L1 5616 5776 -345 284 147 0 40 chr2 58293144 58293219 -194963364 + L1ME4a LINE L1 6047 6118 -3 629 277 68 73 chr2 58293231 58293671 -194962912 - MLT1K LTR MaLR -10 578 141 766 199 0 0 chr2 58293744 58293875 -194962708 + AluJo/FLAM SINE Alu 1 131 -171 1959 148 13 3 chr2 58293877 58294175 -194962408 + AluSx SINE Alu 1 301 -11 915 144 0 0 chr2 58295157 58295324 -194961259 + (TTCCC)n Simple_repeat Simple_repeat 2 168 0 1611 123 13 8 chr2 58295362 58295598 -194960985 - AluSg/x SINE Alu 0 310 74 2167 108 7 0 chr2 58295651 58295937 -194960646 - AluSp SINE Alu -15 298 11 1368 154 50 43 chr2 58295983 58296291 -194960292 - AluJb SINE Alu 0 310 1 846 85 39 0 chr2 58296434 58296563 -194960020 + MER41A LTR ERV1 421 554 0 247 344 78 59 chr2 58296700 58296956 -194959627 + L2 LINE L2 1116 1376 -1938 * 281 219 55 144 chr2 58296952 58297098 -194959485 + L2 LINE L2 2919 3051 -221 765 303 48 53 chr2 58297346 58297447 -194959136 + MER115 DNA AcHobo 56 156 -537 2328 93 7 0 chr2 58297447 58297749 -194958834 - AluSx SINE Alu -8 304 1 765 303 48 53 chr2 58297749 58298026 -194958557 + MER115 DNA AcHobo 156 432 -261 500 259 114 0 chr2 58298084 58298250 -194958333 + MER115 DNA AcHobo 508 692 -1 1475 171 36 62 chr2 58298311 58298616 -194957967 + AluJo SINE Alu 1 297 -15 2169 119 0 19 chr2 58299202 58299512 -194957071 + AluSx SINE Alu 3 306 -6 240 324 0 0 chr2 58299803 58299874 -194956709 - L2 LINE L2 -1 3271 3201 1956 165 37 9 chr2 58300076 58300404 -194956179 + MER1B DNA MER1_type 1 337 0 341 243 271 40 chr2 58300451 58300628 -194955955 - MIR SINE MIR -3 259 42 1812 163 0 17 chr2 58300628 58300941 -194955642 + AluJo SINE Alu 1 308 0 201 159 0 175 chr2 58301027 58301090 -194955493 - L2 LINE L2 -58 3214 3163 243 291 205 8 chr2 58301090 58301207 -194955376 - MIR SINE MIR -76 186 47 369 201 82 107 chr2 58301266 58301403 -194955180 - L2 LINE L2 0 3313 3179 1810 144 56 0 chr2 58301403 58301687 -194954896 + AluJb SINE Alu 13 312 0 369 201 82 107 chr2 58301687 58301708 -194954875 - L2 LINE L2 -134 3179 3159 186 194 28 0 chr2 58301715 58301751 -194954832 + L3 LINE CR1 1530 1566 -11 2342 81 3 7 chr2 58302491 58302788 -194953795 + AluY SINE Alu 1 296 -15 759 168 123 13 chr2 58302874 58303029 -194953554 + FAM SINE Alu 1 172 -3 2094 221 107 20 chr2 58303056 58304135 -194952448 + L1MEc LINE L1 65 1298 -5098 459 73 0 0 chr2 58304135 58304203 -194952380 + (TA)n Simple_repeat Simple_repeat 2 69 0 2094 221 107 20 chr2 58304203 58304307 -194952276 + L1MEc LINE L1 1298 1392 -5004 183 80 0 0 chr2 58304614 58304639 -194951944 + (TTTTC)n Simple_repeat Simple_repeat 2 26 0 448 264 101 0 chr2 58308731 58308860 -194947723 + MIR SINE MIR 14 155 -107 689 190 0 8 chr2 58309191 58309312 -194947271 - FLAM_A SINE Alu -13 120 1 2128 109 20 3 chr2 58309323 58309627 -194946956 - AluSq SINE Alu -4 309 1 387 0 0 0 chr2 58310044 58310087 -194946496 + (CA)n Simple_repeat Simple_repeat 1 43 0 2618 156 43 11 chr2 58310822 58311285 -194945298 + L1MB8 LINE L1 5701 6178 0 219 221 13 9 chr2 58311474 58311527 -194945056 + MIR SINE MIR 91 145 -63 389 289 86 13 chr2 58311745 58311897 -194944686 + L2 LINE L2 2928 3090 -182 2387 93 0 0 chr2 58312537 58312839 -194943744 + AluSg SINE Alu 1 302 -8 881 173 81 25 chr2 58313347 58313544 -194943039 + AluJb SINE Alu 88 295 -17 2198 150 18 9 chr2 58313593 58313927 -194942656 - MER1B DNA MER1_type 0 337 1 2063 100 4 0 chr2 58314502 58314773 -194941810 - AluSx SINE Alu -36 276 5 464 212 51 17 chr2 58314776 58314894 -194941689 + Charlie1 DNA MER1_type 2634 2755 -6 1687 100 125 18 chr2 58315471 58315750 -194940833 - AluSg1 SINE Alu 0 309 1 919 125 48 36 chr2 58316506 58316674 -194939909 - L1MA9 LINE L1 -8 6304 6135 579 191 0 27 chr2 58316675 58316746 -194939837 - U6 snRNA snRNA 0 107 39 2000 164 0 0 chr2 58316746 58317050 -194939533 - AluSx SINE Alu -8 304 1 579 191 0 27 chr2 58317050 58317088 -194939495 - U6 snRNA snRNA -68 39 1 285 333 48 12 chr2 58317393 58317561 -194939022 + MLT1K LTR MaLR 389 562 -26 888 81 0 0 chr2 58317997 58318108 -194938475 - AluSg/x SINE Alu -13 296 186 2146 119 0 3 chr2 58318657 58318951 -194937632 - AluSq SINE Alu -20 293 1 1987 135 3 3 chr2 58319282 58319571 -194937012 + AluSg SINE Alu 6 294 -16 4227 155 32 12 chr2 58320106 58320783 -194935800 + LTR8 LTR ERV1 1 691 0 313 218 40 113 chr2 58321401 58321480 -194935103 - MER5B DNA MER1_type -6 172 103 783 193 143 0 chr2 58321480 58321641 -194934942 + MER5A DNA MER1_type 1 184 -5 280 261 141 11 chr2 58321647 58321739 -194934844 + MER5B DNA MER1_type 75 178 0 632 203 75 0 chr2 58322088 58322221 -194934362 + MER5B DNA MER1_type 6 148 -30 292 228 47 39 chr2 58322448 58322575 -194934008 + L1MC5 LINE L1 7784 7911 -50 335 226 94 9 chr2 58322591 58322697 -194933886 + L1 LINE L1 3272 3386 -2760 40642 71 7 6 chr2 58322736 58328503 -194928080 + L1PA3 LINE L1 11 5779 -376 486 45 45 127 chr2 58328503 58328600 -194927983 + AluYa5/8 SINE Alu 211 300 -11 3489 26 0 3 chr2 58328600 58328984 -194927599 + L1PA3 LINE L1 5770 6152 -3 486 45 45 127 chr2 58328984 58328996 -194927587 + AluYa5/8 SINE Alu 300 311 0 3250 209 120 40 chr2 58328997 58329851 -194926732 - L1MC4a LINE L1 -127 7681 6742 1724 158 12 43 chr2 58329851 58330173 -194926410 - AluSx SINE Alu 0 312 1 3250 209 120 40 chr2 58330173 58330269 -194926314 - L1MC4a LINE L1 -1066 6742 6655 482 263 88 7 chr2 58330276 58330406 -194926177 - MIR SINE MIR -97 165 22 2163 116 7 3 chr2 58330406 58330708 -194925875 - AluSx SINE Alu -9 303 1 868 154 31 62 chr2 58331465 58331660 -194924923 - L1MA9 LINE L1 -8 6304 6116 325 180 0 0 chr2 58331661 58331722 -194924861 - U6 snRNA snRNA -27 80 20 2245 112 0 0 chr2 58331730 58332025 -194924558 - AluSx SINE Alu -17 295 1 263 146 18 0 chr2 58332869 58332924 -194923659 - L1MC4 LINE L1 0 8042 7987 2030 139 13 0 chr2 58332924 58333226 -194923357 + AluJo SINE Alu 1 306 -6 758 299 141 7 chr2 58333373 58333664 -194922919 - MER68 LTR ERV1 -4 558 229 24 0 0 0 chr2 58334386 58334410 -194922173 + AT_rich Low_complexity Low_complexity 1 24 0 2076 139 0 0 chr2 58334411 58334706 -194921877 + AluJb SINE Alu 1 295 -17 749 206 19 6 chr2 58334911 58335071 -194921512 - MER5A DNA MER1_type -2 187 26 1264 161 0 10 chr2 58335326 58335555 -194921028 - AluJo SINE Alu 0 314 88 271 282 81 20 chr2 58335565 58335714 -194920869 + L1ME LINE L1 5725 5882 -239 237 228 29 140 chr2 58335760 58335818 -194920765 + MIR SINE MIR 77 113 -149 2305 161 21 5 chr2 58335818 58336202 -194920381 + MLT1B LTR MaLR 1 390 0 237 228 29 140 chr2 58336202 58336279 -194920304 + MIR SINE MIR 113 197 -65 274 53 26 0 chr2 58336632 58336670 -194919913 + AluY SINE Alu 2 40 -262 211 163 0 41 chr2 58336696 58336745 -194919838 + (TATG)n Simple_repeat Simple_repeat 4 50 0 1975 128 38 0 chr2 58336774 58337062 -194919521 - AluSx SINE Alu -13 299 1 2162 104 0 17 chr2 58337631 58337930 -194918653 + AluSx SINE Alu 1 294 -18 38 0 0 20 chr2 58337977 58338001 -194918582 + AT_rich Low_complexity Low_complexity 1 24 -24 1955 59 0 16 chr2 58338001 58338257 -194918326 + AluY SINE Alu 41 292 -19 38 0 0 20 chr2 58338257 58338281 -194918302 + AT_rich Low_complexity Low_complexity 24 48 0 2291 96 0 7 chr2 58338595 58338898 -194917685 + AluSx SINE Alu 1 301 -11 23 33 0 0 chr2 58339072 58339102 -194917481 + AT_rich Low_complexity Low_complexity 1 30 0 2089 70 77 0 chr2 58339532 58339819 -194916764 - AluSx SINE Alu 0 312 4 582 329 128 31 chr2 58341085 58341468 -194915115 + L3 LINE CR1 1155 1574 -3 611 85 0 0 chr2 58341617 58341699 -194914884 - AluSg/x SINE Alu -10 300 219 243 0 0 0 chr2 58342011 58342038 -194914545 + (TG)n Simple_repeat Simple_repeat 2 28 0 2326 109 0 0 chr2 58342041 58342345 -194914238 - AluSx SINE Alu -8 304 1 25 51 0 0 chr2 58342350 58342389 -194914194 + AT_rich Low_complexity Low_complexity 1 39 0 1927 143 7 3 chr2 58342898 58343199 -194913384 - AluJb SINE Alu -10 302 1 1960 164 3 10 chr2 58343233 58343543 -194913040 + AluJb SINE Alu 5 312 0 2205 120 0 13 chr2 58343544 58343860 -194912723 + AluSx SINE Alu 1 312 0 1487 190 13 42 chr2 58344670 58344981 -194911602 - AluJo SINE Alu -10 302 1 666 253 37 62 chr2 58344985 58345115 -194911468 - MIR SINE MIR -6 256 133 2426 70 10 0 chr2 58345115 58345417 -194911166 + AluSp SINE Alu 1 305 -8 666 253 37 62 chr2 58345417 58345527 -194911056 - MIR SINE MIR -129 133 22 1472 181 24 42 chr2 58345596 58345883 -194910700 + AluJo SINE Alu 12 293 -19 2314 82 17 3 chr2 58346048 58346342 -194910241 - AluSq SINE Alu -15 298 1 219 306 62 128 chr2 58346374 58346727 -194909856 + L2 LINE L2 2933 3262 -10 686 190 0 7 chr2 58346848 58346985 -194909598 - FRAM SINE Alu -4 172 37 1395 206 7 21 chr2 58347089 58347376 -194909207 + AluJo SINE Alu 22 304 -8 1517 240 30 30 chr2 58347423 58347627 -194908956 + L1M4 LINE L1 2417 2620 -3526 2250 89 3 0 chr2 58347627 58347943 -194908640 + AluSx SINE Alu 1 317 0 1517 240 30 30 chr2 58347943 58348212 -194908371 + L1M4 LINE L1 2619 2891 -3255 967 189 0 0 chr2 58348214 58348373 -194908210 + AluJb SINE Alu 1 159 -153 740 109 20 0 chr2 58348375 58348476 -194908107 - AluSq/x SINE Alu -209 104 2 393 176 12 24 chr2 58348579 58348664 -194907919 - L1M4 LINE L1 -3748 2398 2315 269 175 70 0 chr2 58348664 58348721 -194907862 - L1MB7 LINE L1 0 6184 6124 2072 128 3 7 chr2 58348724 58349020 -194907563 - AluSx SINE Alu -17 295 1 2399 68 3 3 chr2 58349464 58349758 -194906825 + AluY SINE Alu 1 294 -17 2126 82 0 0 chr2 58350021 58350288 -194906295 - AluY SINE Alu -10 301 35 847 171 77 33 chr2 58350296 58350418 -194906165 - MER5A DNA MER1_type 0 189 55 2493 93 51 25 chr2 58350418 58350773 -194905810 + THE1B LTR MaLR 1 364 0 847 171 77 33 chr2 58350773 58350831 -194905752 - MER5A DNA MER1_type -134 55 1 601 197 137 71 chr2 58351785 58351968 -194904615 - MLT1L LTR MaLR 0 615 421 862 231 58 36 chr2 58352026 58352303 -194904280 - MLT1L LTR MaLR -298 317 35 955 151 0 65 chr2 58352422 58352608 -194903975 + FRAM SINE Alu 1 174 -2 824 183 71 18 chr2 58352911 58353080 -194903503 + L1MD2 LINE L1 6182 6359 0 260 186 70 147 chr2 58353367 58353496 -194903087 + L2 LINE L2 3194 3312 -1 2106 97 31 0 chr2 58353798 58354086 -194902497 + AluSx SINE Alu 1 297 -15 22 0 0 0 chr2 58354086 58354108 -194902475 + AT_rich Low_complexity Low_complexity 1 22 0 2440 81 0 0 chr2 58356511 58356807 -194899776 - AluSg SINE Alu -14 296 1 1815 111 8 4 chr2 58356826 58357079 -194899504 - AluSx SINE Alu -9 303 50 2104 121 7 0 chr2 58357130 58357419 -194899164 - AluSx SINE Alu -21 291 1 2035 145 20 0 chr2 58357471 58357767 -194898816 + AluSx SINE Alu 1 302 -10 2289 116 3 0 chr2 58358659 58358970 -194897613 - AluSp SINE Alu -1 312 1 720 150 8 8 chr2 58358995 58359115 -194897468 - FLAM_C SINE Alu -19 124 5 240 390 24 0 chr2 58359140 58359222 -194897361 - MIR SINE MIR -86 122 39 6541 160 39 33 chr2 58359340 58361105 -194895478 - L1MC1 LINE L1 -20 6313 4559 2056 153 0 6 chr2 58361105 58361418 -194895165 + AluJb SINE Alu 1 311 -1 2119 119 3 3 chr2 58361418 58361721 -194894862 + AluSq SINE Alu 1 303 -10 6541 160 39 33 chr2 58361721 58362275 -194894308 - L1MC1 LINE L1 -1773 4560 3956 21 0 0 0 chr2 58362688 58362709 -194893874 + AT_rich Low_complexity Low_complexity 1 21 0 240 239 273 0 chr2 58364114 58364202 -194892381 + L2 LINE L2 3200 3311 -2 437 236 57 0 chr2 58365613 58365719 -194890864 - L2 LINE L2 -1 3271 3160 368 158 0 66 chr2 58365979 58366055 -194890528 - AluJ/FRAM SINE Alu -5 297 227 1831 160 10 3 chr2 58366113 58366413 -194890170 + AluJo SINE Alu 1 302 -10 2098 108 20 3 chr2 58366802 58367098 -194889485 + AluSx SINE Alu 1 301 -11 2057 119 7 13 chr2 58367098 58367408 -194889175 + AluSx SINE Alu 1 308 -4 1704 109 13 0 chr2 58368057 58368287 -194888296 + AluSg1 SINE Alu 41 273 -36 202 322 0 0 chr2 58370686 58370745 -194885838 - MIR3 SINE MIR -13 195 137 201 39 0 0 chr2 58371421 58371447 -194885136 + (CAAAAA)n Simple_repeat Simple_repeat 4 29 0 1778 135 57 7 chr2 58371458 58371739 -194884844 + AluSx SINE Alu 14 308 -4 503 241 58 52 chr2 58371745 58371844 -194884739 + MIR SINE MIR 88 191 -71 2161 112 0 0 chr2 58371844 58372159 -194884424 + AluSq SINE Alu 1 315 0 503 241 58 52 chr2 58372159 58372232 -194884351 + MIR SINE MIR 191 262 0 1589 163 0 0 chr2 58372793 58373033 -194883550 - AluSx SINE Alu -36 276 37 416 288 101 123 chr2 58373120 58373706 -194882877 + HAL1 LINE L1 79 651 -1856 4195 162 47 44 chr2 58373830 58374441 -194882142 - L1MB7 LINE L1 -26 6158 5550 1512 170 73 7 chr2 58374441 58374729 -194881854 - AluJb SINE Alu -5 307 1 4195 162 47 44 chr2 58374729 58375374 -194881209 - L1MB7 LINE L1 -634 5550 4902 2502 80 0 0 chr2 58375374 58375685 -194880898 + AluY SINE Alu 1 311 0 4195 162 47 44 chr2 58375685 58375732 -194880851 - L1MB7 LINE L1 -1282 4902 4857 245 289 60 0 chr2 58375734 58375817 -194880766 + HAL1 LINE L1 814 901 -1606 985 131 0 0 chr2 58375839 58375976 -194880607 + AluSx SINE Alu 33 169 -143 444 229 133 41 chr2 58376001 58376219 -194880364 + L1MC4a LINE L1 5649 5886 -1922 398 163 229 60 chr2 58376852 58377018 -194879565 + HAL1 LINE L1 2314 2507 0 709 215 39 94 chr2 58377028 58377159 -194879424 - MIR SINE MIR 0 262 125 1580 170 14 4 chr2 58377159 58377435 -194879148 + AluJb SINE Alu 1 279 -33 183 80 0 0 chr2 58377436 58377461 -194879122 + (CGA)n Simple_repeat Simple_repeat 3 27 0 709 215 39 94 chr2 58377461 58377560 -194879023 - MIR SINE MIR -136 126 43 1617 156 11 8 chr2 58377578 58377841 -194878742 - AluJb SINE Alu -21 291 28 265 312 80 40 chr2 58378378 58378577 -194878006 + L1MC/D LINE L1 5387 5593 -528 2069 69 0 0 chr2 58378739 58379009 -194877574 + AluSc SINE Alu 37 306 0 2356 92 7 0 chr2 58379443 58379749 -194876834 + AluSp SINE Alu 3 310 -3 1587 165 82 17 chr2 58379815 58380167 -194876416 + THE1C LTR MaLR 1 375 0 8941 114 55 61 chr2 58380169 58380215 -194876368 + THE1C-int LTR MaLR 3 48 -1532 2053 134 0 0 chr2 58380215 58380506 -194876077 + AluSx SINE Alu 1 291 -21 8941 114 55 61 chr2 58380506 58380872 -194875711 + THE1C-int LTR MaLR 48 415 -1165 2321 110 0 0 chr2 58380872 58381182 -194875401 + AluSg SINE Alu 1 310 0 8941 114 55 61 chr2 58381182 58382355 -194874228 + THE1C-int LTR MaLR 415 1580 0 1494 157 173 52 chr2 58382355 58382515 -194874068 + MSTA LTR MaLR 1 140 -288 2200 128 0 3 chr2 58382515 58382821 -194873762 + AluSx SINE Alu 1 305 -7 1494 157 173 52 chr2 58382821 58383042 -194873541 + MSTA LTR MaLR 140 428 0 220 279 76 13 chr2 58383062 58383141 -194873442 - L3 LINE CR1 -2 1575 1492 406 306 182 23 chr2 58383199 58383457 -194873126 - L3 LINE CR1 -224 1353 1055 1827 165 7 3 chr2 58383751 58384048 -194872535 - AluJb SINE Alu -13 299 2 26 0 0 0 chr2 58384052 58384078 -194872505 + AT_rich Low_complexity Low_complexity 1 26 0 180 0 0 0 chr2 58385686 58385706 -194870877 + (TA)n Simple_repeat Simple_repeat 1 20 0 510 235 31 42 chr2 58385723 58385882 -194870701 - MIR SINE MIR -50 212 57 685 106 16 8 chr2 58385890 58386013 -194870570 + L1MA4A LINE L1 6179 6302 -1 23 0 0 0 chr2 58386447 58386470 -194870113 + AT_rich Low_complexity Low_complexity 1 23 0 1629 189 13 10 chr2 58387101 58387407 -194869176 + AluJo SINE Alu 1 307 -5 348 316 26 53 chr2 58387606 58387758 -194868825 + MIR3 SINE MIR 56 203 -5 1997 147 3 3 chr2 58387798 58388091 -194868492 - AluSx SINE Alu -19 293 1 21 57 0 0 chr2 58388512 58388547 -194868036 + AT_rich Low_complexity Low_complexity 1 35 0 192 40 0 0 chr2 58388978 58389003 -194867580 + (CAA)n Simple_repeat Simple_repeat 2 26 0 8075 49 28 0 chr2 58389285 58390265 -194866318 + LTR13 LTR ERVK 1 1007 0 1737 110 4 4 chr2 58390390 58390635 -194865948 + AluSg SINE Alu 46 290 -20 2141 123 0 3 chr2 58391404 58391696 -194864887 + AluSg SINE Alu 1 291 -19 22 0 0 0 chr2 58391809 58391831 -194864752 + AT_rich Low_complexity Low_complexity 1 22 0 2098 113 23 3 chr2 58391994 58392295 -194864288 - AluSx SINE Alu -5 307 1 264 316 42 45 chr2 58392335 58392645 -194863938 + L1MC/D LINE L1 4822 5130 -1016 375 309 103 37 chr2 58392783 58393296 -194863287 + L1MC/D LINE L1 5317 5862 -304 24 53 0 0 chr2 58393499 58393537 -194863046 + AT_rich Low_complexity Low_complexity 1 38 0 1769 183 3 16 chr2 58394262 58394568 -194862015 - AluJb SINE Alu -10 302 1 23 33 0 0 chr2 58394790 58394820 -194861763 + AT_rich Low_complexity Low_complexity 1 30 0 2347 87 0 3 chr2 58394970 58395269 -194861314 - AluY SINE Alu -13 298 1 2598 42 0 10 chr2 58395308 58395615 -194860968 - AluY SINE Alu -7 304 1 1833 156 28 0 chr2 58395825 58396113 -194860470 - AluJb SINE Alu -16 296 1 2111 117 3 7 chr2 58396440 58396730 -194859853 + AluSx SINE Alu 1 289 -23 1859 58 153 0 chr2 58396836 58397097 -194859486 + AluY SINE Alu 1 301 0 33 25 0 0 chr2 58397724 58397764 -194858819 + AT_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr2 58398069 58398091 -194858492 + AT_rich Low_complexity Low_complexity 1 22 0 349 272 115 16 chr2 58398230 58398421 -194858162 + L1MC4a LINE L1 5627 5836 -1972 380 253 148 35 chr2 58398853 58399145 -194857438 - L1ME3 LINE L1 -233 5929 5590 442 141 0 0 chr2 58399795 58399866 -194856717 - U3 snRNA snRNA -146 71 1 21 36 0 0 chr2 58400475 58400503 -194856080 + AT_rich Low_complexity Low_complexity 1 28 0 472 133 80 44 chr2 58400542 58400655 -194855928 + L1MA8 LINE L1 6064 6180 -111 2354 83 3 0 chr2 58401346 58401634 -194854949 + AluSx SINE Alu 1 289 -23 377 93 0 0 chr2 58401647 58401701 -194854882 - L1MB2 LINE L1 -48 6123 6070 198 0 0 0 chr2 58402081 58402103 -194854480 + (CAAAA)n Simple_repeat Simple_repeat 1 22 0 1055 144 55 6 chr2 58402637 58402818 -194853765 - AluSg/x SINE Alu -11 299 110 439 252 27 9 chr2 58402889 58403000 -194853583 + HsTC2 DNA Tc2 6 118 -1780 300 216 0 0 chr2 58403009 58403060 -194853523 + HsTC2 DNA Tc2 1236 1286 -612 1035 118 7 0 chr2 58404309 58404453 -194852130 + AluSx SINE Alu 11 155 -157 607 101 0 0 chr2 58404454 58404543 -194852040 + AluSp/q SINE Alu 216 304 -9 2151 85 3 7 chr2 58404726 58405031 -194851552 - L1PB1 LINE L1 -1 6150 5847 1209 160 58 111 chr2 58406152 58406636 -194849947 + Charlie1b DNA MER1_type 1 457 -66 22 0 0 0 chr2 58406827 58406849 -194849734 + AT_rich Low_complexity Low_complexity 1 22 0 2178 126 0 0 chr2 58407677 58407978 -194848605 + AluSx SINE Alu 1 301 -11 2443 90 3 0 chr2 58408607 58408918 -194847665 + AluSp SINE Alu 1 312 -1 2339 81 0 3 chr2 58410009 58410305 -194846278 + AluY SINE Alu 1 295 -16 296 98 24 24 chr2 58410306 58410388 -194846195 + (TA)n Simple_repeat Simple_repeat 1 82 0 2303 103 3 0 chr2 58410421 58410733 -194845850 + AluSp SINE Alu 1 313 0 1754 164 16 20 chr2 58411513 58411818 -194844765 - AluJb SINE Alu -8 304 1 257 274 150 65 chr2 58412528 58412681 -194843902 - MIR3 SINE MIR 0 208 43 205 290 151 0 chr2 58412789 58412882 -194843701 + L3 LINE CR1 768 874 -703 2086 105 14 3 chr2 58413254 58413549 -194843034 + AluSx SINE Alu 1 298 -14 730 197 38 8 chr2 58414000 58414132 -194842451 + AluJo SINE Alu 2 137 -175 2550 180 47 14 chr2 58414191 58414685 -194841898 + L1PB4 LINE L1 5647 6156 0 2140 117 10 3 chr2 58415402 58415700 -194840883 - AluSx SINE Alu -12 300 1 820 172 31 0 chr2 58415723 58415851 -194840732 + FLAM_C SINE Alu 1 132 -1 830 227 57 40 chr2 58415869 58416168 -194840415 - Charlie1 DNA MER1_type -115 2646 2343 286 290 0 14 chr2 58416167 58416236 -194840347 - Charlie1 DNA MER1_type -2691 70 3 * 3393 132 20 8 chr2 58416531 58417039 -194839544 - MER75 DNA T2_type 0 514 1 2413 89 0 3 chr2 58417056 58417360 -194839223 + AluSq SINE Alu 1 303 -10 1522 119 28 44 chr2 58417373 58417580 -194839003 + L1MB4 LINE L1 5928 6133 -47 2098 103 3 24 chr2 58417580 58417716 -194838867 + AluSp SINE Alu 1 138 -169 2362 67 0 0 chr2 58417716 58418026 -194838557 + AluY SINE Alu 1 310 0 2098 103 3 24 chr2 58418026 58418201 -194838382 + AluSp SINE Alu 138 307 0 1522 119 28 44 chr2 58418201 58418243 -194838340 + L1MB4 LINE L1 6133 6174 -6 2080 127 0 7 chr2 58418311 58418611 -194837972 + AluSx SINE Alu 1 298 -14 2212 122 0 6 chr2 58419531 58419842 -194836741 + AluSx SINE Alu 1 309 -3 295 258 129 16 chr2 58419872 58419996 -194836587 + MLT1J1 LTR MaLR 285 422 -24 2347 98 3 0 chr2 58420525 58420832 -194835751 + AluSp SINE Alu 6 313 0 206 326 0 0 chr2 58421113 58421208 -194835375 + A-rich Low_complexity Low_complexity 1 95 0 1831 133 52 0 chr2 58421252 58421538 -194835045 + AluSg SINE Alu 1 301 -9 919 234 0 51 chr2 58421539 58421753 -194834830 + MER77-int LTR ERV1 3925 4127 -64 2524 67 0 0 chr2 58421754 58422053 -194834530 - AluY SINE Alu -10 301 3 2538 220 35 17 chr2 58422737 58423273 -194833310 + MER77 LTR ERV1 54 599 -6 1971 131 14 0 chr2 58423336 58423626 -194832957 - AluSx SINE Alu -16 296 3 309 194 30 0 chr2 58423819 58423886 -194832697 + L1MC3 LINE L1 7717 7785 0 240 35 0 0 chr2 58425171 58425200 -194831383 + (CA)n Simple_repeat Simple_repeat 2 30 0 1744 145 34 20 chr2 58425216 58425512 -194831071 - AluJb SINE Alu -12 300 1 2360 96 0 0 chr2 58426001 58426304 -194830279 + AluSc SINE Alu 1 303 -6 23 68 0 0 chr2 58426563 58426607 -194829976 + AT_rich Low_complexity Low_complexity 1 44 0 460 209 70 8 chr2 58426653 58426782 -194829801 - Charlie7 DNA MER1_type -1889 723 587 715 194 0 24 chr2 58426786 58426910 -194829673 + FLAM_C SINE Alu 9 129 -14 2167 114 3 3 chr2 58426915 58427214 -194829369 + AluSq SINE Alu 1 299 -14 377 269 215 19 chr2 58427223 58427479 -194829104 - Charlie7 DNA MER1_type -2009 603 298 3087 207 56 27 chr2 58427515 58428177 -194828406 - MER21B LTR ERV1 -30 833 153 2221 122 3 0 chr2 58428374 58428678 -194827905 - AluSx SINE Alu -7 305 1 506 294 120 30 chr2 58428758 58429057 -194827526 + L2 LINE L2 2428 2753 -561 1473 197 51 7 chr2 58429076 58429350 -194827233 + AluJo SINE Alu 1 286 -16 769 111 19 9 chr2 58429563 58429671 -194826912 - FAM SINE Alu -53 132 24 1667 188 47 0 chr2 58429773 58430071 -194826512 + AluJb SINE Alu 1 312 0 340 340 58 16 chr2 58430124 58430312 -194826271 + L1MC4a LINE L1 5877 6072 -1736 22 0 0 0 chr2 58430361 58430383 -194826200 + AT_rich Low_complexity Low_complexity 1 22 0 248 296 119 53 chr2 58430439 58430757 -194825826 + L2 LINE L2 2422 2760 -554 281 280 0 0 chr2 58430991 58431066 -194825517 + MIR SINE MIR 68 142 -120 1792 167 21 0 chr2 58431242 58431529 -194825054 - AluJb SINE Alu -14 298 6 971 158 82 0 chr2 58431540 58431698 -194824885 - FAM SINE Alu -4 171 1 1555 183 3 20 chr2 58432107 58432402 -194824181 - AluJo SINE Alu -19 293 4 705 165 0 0 chr2 58432514 58432617 -194823966 + FLAM_A SINE Alu 22 124 -18 606 170 28 9 chr2 58432822 58432928 -194823655 + FLAM_C SINE Alu 15 122 -21 1024 187 9 61 chr2 58432976 58433035 -194823548 + AluJo SINE Alu 87 147 -165 2390 70 0 7 chr2 58433035 58433334 -194823249 + AluY SINE Alu 1 297 -14 1024 187 9 61 chr2 58433334 58433488 -194823095 + AluJo SINE Alu 147 289 -23 225 252 75 38 chr2 58434751 58434910 -194821673 + L1ME3A LINE L1 5781 5945 -225 2063 89 30 23 chr2 58435952 58436255 -194820328 + AluSc SINE Alu 1 305 -4 24 32 0 0 chr2 58436468 58436499 -194820084 + AT_rich Low_complexity Low_complexity 1 31 0 202 262 0 0 chr2 58437728 58437770 -194818813 + (CGG)n Simple_repeat Simple_repeat 2 43 0 793 201 38 11 chr2 58439012 58439196 -194817387 - AluSc SINE Alu -9 300 112 426 320 65 7 chr2 58439683 58439836 -194816747 - MER115 DNA AcHobo -432 261 100 2168 102 7 7 chr2 58440030 58440333 -194816250 + AluSx SINE Alu 1 303 -9 613 192 212 0 chr2 58440446 58440592 -194815991 + MER45A DNA AcHobo 1 177 -1 1174 178 0 0 chr2 58440645 58440842 -194815741 + MER1B DNA MER1_type 24 220 -77 519 101 0 0 chr2 58440844 58440913 -194815670 + MER1B DNA MER1_type 261 329 0 * 778 137 26 0 chr2 58440913 58441028 -194815555 + Tigger3(Golem) DNA MER2_type 2912 3029 0 791 153 0 24 chr2 58441054 58441178 -194815405 - FLAM_C SINE Alu -12 131 11 2009 121 48 0 chr2 58441201 58441490 -194815093 - AluSq SINE Alu -8 305 3 3964 169 128 31 chr2 58441562 58442434 -194814149 + LTR28 LTR ERV1 1 957 -63 243 278 0 0 chr2 58442491 58442545 -194814038 + LTR27 LTR ERV1 583 636 0 255 262 163 7 chr2 58442545 58442686 -194813897 - L1MC/D LINE L1 -2012 5796 5634 463 183 37 0 chr2 58442687 58442769 -194813814 - MER20 DNA MER1_type 0 219 135 249 346 39 26 chr2 58442906 58443059 -194813524 + L2 LINE L2 2916 3070 -243 630 325 121 21 chr2 58443119 58443550 -194813033 - MLT1K LTR MaLR -2 474 1 359 236 82 60 chr2 58443652 58443834 -194812749 + L2 LINE L2 3127 3312 -1 225 364 111 20 chr2 58443926 58444124 -194812459 + L2 LINE L2 2626 2841 -473 319 251 151 84 chr2 58444287 58444466 -194812117 - HAL1 LINE L1 -1882 625 435 231 125 0 0 chr2 58444493 58444533 -194812050 + (TG)n Simple_repeat Simple_repeat 1 40 0 2095 109 0 7 chr2 58444667 58444998 -194811585 - AluSc SINE Alu 0 330 2 315 119 0 0 chr2 58445061 58445103 -194811480 - Alu SINE Alu -260 42 1 255 217 66 96 chr2 58445303 58445469 -194811114 - L1MC/D LINE L1 -1088 5058 4898 767 202 0 0 chr2 58445646 58445765 -194810818 - FLAM_C SINE Alu -23 120 2 1914 242 31 24 chr2 58445784 58446239 -194810344 + LTR16B LTR ERVL 5 462 -2 389 377 56 0 chr2 58446301 58446553 -194810030 + HERV16 LTR ERVL 119 384 -4612 772 270 60 16 chr2 58446844 58447092 -194809491 + HERV16 LTR ERVL 755 1013 -3983 1451 169 165 0 chr2 58447267 58447521 -194809062 - AluJb SINE Alu -4 298 3 2165 118 7 0 chr2 58447525 58447821 -194808762 - AluSq SINE Alu -15 298 1 1819 138 7 41 chr2 58447869 58448160 -194808423 + AluJo SINE Alu 11 291 -21 1361 134 4 30 chr2 58448416 58448647 -194807936 + AluJo SINE Alu 87 311 -1 1679 149 24 28 chr2 58449492 58449781 -194806802 - AluJb SINE Alu -24 288 1 2336 80 3 0 chr2 58449833 58450122 -194806461 + AluSc SINE Alu 1 290 -19 244 65 0 0 chr2 58450391 58450422 -194806161 + MER53 DNA DNA 1 31 -158 735 143 180 19 chr2 58450457 58450618 -194805965 + MER53 DNA DNA 2 188 -1 197 278 72 31 chr2 58450979 58451076 -194805507 + L2 LINE L2 2549 2649 -665 2109 86 0 101 chr2 58451146 58451483 -194805100 + AluSx SINE Alu 1 303 -9 567 301 108 60 chr2 58451671 58451870 -194804713 + L2 LINE L2 2943 3131 -182 2584 169 38 91 chr2 58451870 58452334 -194804249 - MER6A DNA MER2_type -260 605 183 2308 95 0 16 chr2 58452334 58452638 -194803945 - AluSx SINE Alu -13 299 1 2584 169 38 91 chr2 58452638 58452812 -194803771 - MER6A DNA MER2_type -682 183 1 567 301 108 60 chr2 58452812 58452870 -194803713 + L2 LINE L2 3131 3185 -128 2310 105 0 0 chr2 58452870 58453174 -194803409 - AluSx SINE Alu -8 304 1 567 301 108 60 chr2 58453174 58453250 -194803333 + L2 LINE L2 3185 3293 -20 2222 99 3 16 chr2 58453551 58453864 -194802719 + AluY SINE Alu 1 309 -2 1217 128 28 0 chr2 58453864 58454044 -194802539 + AluSc SINE Alu 124 308 -1 2313 104 0 0 chr2 58454635 58454932 -194801651 - AluSx SINE Alu -11 301 5 2450 78 0 0 chr2 58454936 58455230 -194801353 - AluSq SINE Alu -19 294 1 1060 193 0 6 chr2 58455261 58455427 -194801156 - FAM SINE Alu -9 166 2 1899 107 8 0 chr2 58455690 58455943 -194800640 - AluSq SINE Alu -14 299 45 22 35 0 0 chr2 58456487 58456516 -194800067 + AT_rich Low_complexity Low_complexity 1 29 0 234 0 0 0 chr2 58457246 58457272 -194799311 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2221 92 0 13 chr2 58458089 58458392 -194798191 + AluY SINE Alu 1 299 -12 2173 134 0 0 chr2 58458394 58458693 -194797890 + AluSx SINE Alu 1 299 -13 1581 172 55 7 chr2 58458754 58459027 -194797556 + AluJb SINE Alu 1 286 -26 2099 125 0 3 chr2 58459154 58459450 -194797133 - AluSx SINE Alu -17 295 1 291 299 19 0 chr2 58459554 58459661 -194796922 + L1MC4 LINE L1 7934 8042 0 314 268 12 12 chr2 58459753 58459835 -194796748 - L1ME LINE L1 -531 5590 5509 348 316 162 16 chr2 58460269 58460516 -194796067 - L1ME LINE L1 -1131 5015 4733 2183 107 0 0 chr2 58460537 58460826 -194795757 - AluSc SINE Alu -20 289 1 2219 100 0 3 chr2 58461318 58461609 -194794974 + AluSc SINE Alu 1 290 -19 1446 111 68 0 chr2 58461659 58461866 -194794717 - AluSg/x SINE Alu -13 299 79 2230 102 0 0 chr2 58462222 58462515 -194794068 - AluSg SINE Alu -17 293 1 2395 65 10 10 chr2 58462700 58463008 -194793575 + AluY SINE Alu 1 308 -3 1590 191 17 7 chr2 58463210 58463503 -194793080 + AluJo SINE Alu 1 296 -16 1574 176 35 14 chr2 58463838 58464127 -194792456 + AluJo SINE Alu 1 295 -17 372 292 75 33 chr2 58464244 58464364 -194792219 - L2 LINE L2 0 3272 3148 2686 23 0 3 chr2 58465398 58465699 -194790884 - AluY SINE Alu -11 300 1 693 123 74 41 chr2 58466070 58466192 -194790391 - FLAM_C SINE Alu -12 131 6 2185 116 7 0 chr2 58466211 58466503 -194790080 - AluSx SINE Alu -18 294 1 1718 121 98 4 chr2 58467203 58467488 -194789095 - AluSg SINE Alu 0 309 1 200 98 0 98 chr2 58467644 58467695 -194788888 + (TTTTTA)n Simple_repeat Simple_repeat 1 46 0 2067 124 0 10 chr2 58467898 58468197 -194788386 - AluSx SINE Alu -15 297 2 182 77 128 26 chr2 58468242 58468281 -194788302 - L3 LINE CR1 -5 1572 1530 372 265 23 30 chr2 58468586 58468718 -194787865 - L1MC4a LINE L1 -1892 5916 5786 584 300 85 12 chr2 58468735 58469065 -194787518 - L1MC4a LINE L1 -2172 5636 5283 33 66 0 0 chr2 58469084 58469145 -194787438 + AT_rich Low_complexity Low_complexity 1 61 0 474 339 17 11 chr2 58469352 58469532 -194787051 + L2 LINE L2 2175 2355 -959 837 181 0 0 chr2 58469532 58469659 -194786924 + FLAM_C SINE Alu 1 127 -16 295 256 74 8 chr2 58470114 58470235 -194786348 - MER103 DNA DNA -2 164 36 6632 68 24 46 chr2 58470513 58472167 -194784416 + SVA Other Other 1 1382 -4 244 237 0 0 chr2 58472229 58472288 -194784295 + A-rich Low_complexity Low_complexity 1 59 0 225 340 50 35 chr2 58472338 58472479 -194784104 + L2 LINE L2 2897 3039 -233 659 350 71 61 chr2 58472710 58473226 -194783357 - L3 LINE CR1 -747 830 304 2186 120 7 0 chr2 58473226 58473525 -194783058 - AluSx SINE Alu -11 301 1 659 350 71 61 chr2 58473525 58473668 -194782915 - L3 LINE CR1 -1273 304 164 353 319 53 0 chr2 58473893 58474006 -194782577 + L2 LINE L2 3195 3313 0 2420 93 0 0 chr2 58474354 58474654 -194781929 + AluSg SINE Alu 1 300 -10 736 129 0 40 chr2 58475120 58475244 -194781339 - FLAM_C SINE Alu -10 133 15 301 191 15 0 chr2 58475498 58475566 -194781017 - MER3 DNA MER1_type 0 209 141 899 142 92 0 chr2 58475656 58475797 -194780786 - AluY SINE Alu -157 154 1 235 184 0 0 chr2 58477366 58477415 -194779168 + MER102a DNA MER1_type 86 134 -196 1964 142 17 0 chr2 58477424 58477719 -194778864 + AluSx SINE Alu 1 300 -12 2334 84 10 0 chr2 58477755 58478054 -194778529 - AluSq SINE Alu -3 310 9 612 263 11 0 chr2 58478078 58478257 -194778326 + L1MC5 LINE L1 7316 7496 -465 213 39 0 0 chr2 58478257 58478283 -194778300 + (A)n Simple_repeat Simple_repeat 1 26 0 1916 162 17 0 chr2 58478332 58478634 -194777949 + AluJb SINE Alu 1 307 -5 408 252 29 67 chr2 58478713 58478923 -194777660 + L1ME3A LINE L1 5962 6163 -7 253 202 112 22 chr2 58479020 58479109 -194777474 + MER102a DNA MER1_type 212 308 -22 1957 162 3 3 chr2 58479328 58479631 -194776952 - AluJo SINE Alu -9 303 1 1220 175 0 5 chr2 58480281 58480487 -194776096 + AluJb SINE Alu 85 289 -23 25 0 0 0 chr2 58480487 58480512 -194776071 + AT_rich Low_complexity Low_complexity 1 25 0 213 270 90 90 chr2 58481042 58481220 -194775363 - MIR3 SINE MIR -8 200 23 2188 92 23 16 chr2 58481465 58481770 -194774813 - AluY SINE Alu -4 307 1 345 225 86 95 chr2 58482727 58482770 -194773813 + L1ME LINE L1 820 862 -5510 2178 128 3 0 chr2 58482770 58483074 -194773509 + AluSg SINE Alu 1 305 -5 345 225 86 95 chr2 58483074 58483252 -194773331 + L1ME LINE L1 862 1039 -5333 1506 90 0 25 chr2 58483256 58483457 -194773126 - AluSg/x SINE Alu -12 298 103 751 242 133 31 chr2 58483658 58484071 -194772512 + L1ME LINE L1 1129 1670 -4712 2213 79 0 36 chr2 58484082 58484386 -194772197 + AluY SINE Alu 1 293 -18 669 279 44 25 chr2 58484397 58484716 -194771867 + L1ME LINE L1 1875 2199 -4364 631 193 0 0 chr2 58484720 58484829 -194771754 + FLAM_C SINE Alu 16 124 -19 599 260 31 24 chr2 58484855 58485143 -194771440 + L1ME LINE L1 2195 2484 -4079 536 348 65 28 chr2 58485174 58485741 -194770842 + L1M4 LINE L1 4465 5074 -1072 237 153 271 0 chr2 58486008 58486067 -194770516 - MER91C DNA MER1_type -32 108 34 385 214 20 31 chr2 58486507 58486639 -194769944 + L1ME1 LINE L1 5927 6215 -116 826 201 0 30 chr2 58486639 58486808 -194769775 - FRAM SINE Alu -12 164 1 256 286 27 0 chr2 58486811 58486923 -194769660 + L1MA10 LINE L1 6216 6330 -4 1701 173 17 17 chr2 58486944 58487244 -194769339 + AluJo SINE Alu 1 300 -12 24 0 0 0 chr2 58487251 58487275 -194769308 + AT_rich Low_complexity Low_complexity 1 24 0 349 314 5 113 chr2 58487556 58487698 -194768885 - MER5B DNA MER1_type -5 173 56 2476 57 27 0 chr2 58487698 58487998 -194768585 + AluY SINE Alu 1 308 -3 349 314 5 113 chr2 58487998 58488049 -194768534 - MER5B DNA MER1_type -122 56 1 1974 160 0 3 chr2 58488617 58488923 -194767660 - AluSx SINE Alu -7 305 1 2347 89 0 0 chr2 58488992 58489285 -194767298 - AluSp SINE Alu -20 293 1 21 0 0 0 chr2 58489351 58489372 -194767211 + AT_rich Low_complexity Low_complexity 1 21 0 411 275 106 0 chr2 58489394 58489536 -194767047 - MIR SINE MIR -5 257 101 264 380 0 9 chr2 58489574 58489682 -194766901 - MIR SINE MIR -137 125 19 2250 112 7 0 chr2 58490148 58490444 -194766139 - AluSx SINE Alu -14 298 1 2433 82 0 0 chr2 58490565 58490871 -194765712 - AluY SINE Alu -5 306 1 197 250 0 0 chr2 58490974 58491014 -194765569 - L2 LINE L2 -10 3303 3264 * 367 215 196 0 chr2 58490980 58491087 -194765496 - MIR SINE MIR -10 252 125 215 349 134 13 chr2 58491194 58491343 -194765240 - MIR SINE MIR -9 253 87 224 260 183 19 chr2 58491458 58491562 -194765021 - L2 LINE L2 -258 3055 2935 225 0 0 0 chr2 58491675 58491700 -194764883 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 1766 116 54 0 chr2 58491976 58492235 -194764348 + AluSx SINE Alu 33 305 -7 195 188 104 42 chr2 58492877 58492925 -194763658 - L2 LINE L2 -4 3268 3218 239 163 23 23 chr2 58493750 58493836 -194762747 - L1MB7 LINE L1 0 6184 6099 2324 85 7 0 chr2 58493837 58494130 -194762453 - AluY SINE Alu -15 296 2 1293 157 0 5 chr2 58494203 58494407 -194762176 - AluSx SINE Alu -108 204 2 902 169 48 70 chr2 58494591 58494697 -194761886 + L1MDa LINE L1 1990 2097 -4443 2091 152 3 0 chr2 58494697 58495007 -194761576 + AluSx SINE Alu 1 311 -1 902 169 48 70 chr2 58495007 58495173 -194761410 + L1MDa LINE L1 2097 2256 -4284 1213 189 21 84 chr2 58495364 58495650 -194760933 + AluJo SINE Alu 1 268 -44 564 220 59 0 chr2 58495692 58495810 -194760773 + AluJo SINE Alu 1 125 -187 784 207 21 0 chr2 58495934 58496106 -194760477 + AluJo SINE Alu 134 308 0 873 166 155 0 chr2 58496132 58496313 -194760270 - MER3 DNA MER1_type 0 209 1 2359 100 7 0 chr2 58496364 58496673 -194759910 + AluSx SINE Alu 1 311 -1 2156 125 0 0 chr2 58496967 58497263 -194759320 + AluSx SINE Alu 3 298 -14 2296 110 0 10 chr2 58497698 58498007 -194758576 + AluSx SINE Alu 2 307 -5 2391 45 3 11 chr2 58498116 58498425 -194758158 - AluY SINE Alu 0 307 1 228 315 109 0 chr2 58498442 58498534 -194758049 - MIR SINE MIR -1 261 160 302 319 22 15 chr2 58498690 58498825 -194757758 + LTR67 LTR ERVL 39 174 -383 * 846 261 7 81 chr2 58498747 58499153 -194757430 + MLT1J LTR MaLR 94 469 -42 348 273 23 23 chr2 58499400 58499488 -194757095 - MIR SINE MIR -155 107 20 26 93 0 0 chr2 58499759 58499834 -194756749 + AT_rich Low_complexity Low_complexity 1 75 0 210 325 112 79 chr2 58500327 58500693 -194755890 + L2 LINE L2 2857 3234 -38 189 211 0 96 chr2 58500935 58500987 -194755596 - MIR3 SINE MIR -15 193 147 588 258 78 74 chr2 58501382 58501509 -194755074 + MIR SINE MIR 15 145 -117 2098 134 0 0 chr2 58501509 58501807 -194754776 + AluSx SINE Alu 1 298 -14 588 258 78 74 chr2 58501807 58501923 -194754660 + MIR SINE MIR 145 259 -3 2308 101 3 0 chr2 58501947 58502244 -194754339 + AluSp SINE Alu 1 298 -15 2346 90 0 6 chr2 58502244 58502556 -194754027 + AluY SINE Alu 1 310 -1 2019 119 14 10 chr2 58502564 58502857 -194753726 + AluSx SINE Alu 1 294 -18 1786 174 13 7 chr2 58503010 58503315 -194753268 + AluJo SINE Alu 1 307 -5 287 260 268 0 chr2 58503547 58503674 -194752909 + L2 LINE L2 2864 3024 -248 2292 104 3 0 chr2 58503717 58504015 -194752568 + AluSg SINE Alu 1 299 -11 1832 103 103 0 chr2 58504594 58504855 -194751728 + AluSg SINE Alu 1 288 -22 505 287 138 6 chr2 58505061 58505235 -194751348 - L2 LINE L2 0 3313 3117 1748 158 7 30 chr2 58505630 58505928 -194750655 + AluJo SINE Alu 4 294 -18 2064 153 33 0 chr2 58506103 58506436 -194750147 + MER2 DNA MER2_type 1 344 0 519 165 0 0 chr2 58507231 58507316 -194749267 + AluSc SINE Alu 1 85 -224 2460 70 0 0 chr2 58507316 58507615 -194748968 + AluY SINE Alu 1 299 -12 1751 91 0 0 chr2 58507615 58507833 -194748750 + AluSc SINE Alu 71 290 -19 1989 164 13 0 chr2 58508418 58508723 -194747860 - AluJo SINE Alu -3 309 1 187 356 0 0 chr2 58508729 58508788 -194747795 + L2 LINE L2 2574 2632 -682 1863 150 0 4 chr2 58508825 58509105 -194747478 + AluSx SINE Alu 1 279 -33 270 21 64 0 chr2 58509105 58509152 -194747431 + (CAA)n Simple_repeat Simple_repeat 2 51 0 1566 170 95 17 chr2 58509254 58509781 -194746802 + L1MB8 LINE L1 4877 5454 -730 2202 126 55 79 chr2 58509787 58510219 -194746364 + L1MB8 LINE L1 5691 6112 -66 1884 173 0 0 chr2 58510219 58510503 -194746080 - AluJb SINE Alu -26 286 3 2202 126 55 79 chr2 58510503 58510558 -194746025 + L1MB8 LINE L1 6112 6167 -11 214 204 0 41 chr2 58511611 58511660 -194744923 + L2 LINE L2 3262 3308 -5 241 118 0 0 chr2 58511779 58511813 -194744770 + L2 LINE L2 3264 3297 -16 182 291 36 0 chr2 58512118 58512173 -194744410 - MIR3 SINE MIR -1 207 151 279 0 0 0 chr2 58512232 58512263 -194744320 + (TA)n Simple_repeat Simple_repeat 1 31 0 2185 115 7 3 chr2 58512263 58512568 -194744015 - AluSq SINE Alu -7 306 1 364 200 14 0 chr2 58512609 58512679 -194743904 + MER58 DNA MER1_type 2350 2420 0 255 330 16 71 chr2 58512926 58513108 -194743475 + MIR SINE MIR 20 191 -71 477 171 0 0 chr2 58513201 58513271 -194743312 - AluS SINE Alu -229 84 15 349 272 28 39 chr2 58513301 58513481 -194743102 + (TCTCTG)n Simple_repeat Simple_repeat 3 180 0 2274 55 79 0 chr2 58515104 58515394 -194741189 + AluSp SINE Alu 1 313 0 2169 84 37 7 chr2 58515397 58515695 -194740888 + AluSc SINE Alu 3 309 0 707 222 145 18 chr2 58516077 58516247 -194740336 + MIR SINE MIR 2 208 -54 2887 13 0 0 chr2 58516247 58516557 -194740026 + AluYb8 SINE Alu 1 310 -8 707 222 145 18 chr2 58516557 58516607 -194739976 + MIR SINE MIR 208 250 -12 2234 101 0 7 chr2 58516630 58516927 -194739656 - AluSq SINE Alu -16 297 3 2281 108 0 0 chr2 58517576 58517871 -194738712 - AluSx SINE Alu -17 295 1 356 331 73 34 chr2 58518072 58518401 -194738182 + L2 LINE L2 2665 2996 -276 910 264 13 13 chr2 58518527 58518762 -194737821 + MIR SINE MIR 4 238 -24 413 233 20 68 chr2 58518777 58518923 -194737660 - L2 LINE L2 -16 3297 3159 514 282 164 36 chr2 58518943 58519590 -194736993 - L2 LINE L2 -103 3210 2463 297 289 202 0 chr2 58519619 58519792 -194736791 - L2 LINE L2 -980 2334 2127 950 292 127 26 chr2 58519862 58520318 -194736265 + LTR33 LTR ERVL 1 502 -19 422 273 45 45 chr2 58520352 58520528 -194736055 - L1MCc LINE L1 -5426 997 822 519 62 26 44 chr2 58520652 58520765 -194735818 + (TCCCC)n Simple_repeat Simple_repeat 5 115 0 678 211 0 8 chr2 58520821 58520954 -194735629 - FLAM_A SINE Alu -1 132 1 414 307 66 33 chr2 58520977 58521221 -194735362 - L1MCc LINE L1 -5835 588 337 706 199 59 65 chr2 58521244 58521304 -194735279 - MLT1A2 LTR MaLR 0 374 315 2136 110 3 3 chr2 58521304 58521603 -194734980 - AluSg SINE Alu -11 299 1 706 199 59 65 chr2 58521603 58521728 -194734855 - MLT1A2 LTR MaLR -59 315 190 354 183 0 39 chr2 58521749 58521853 -194734730 + GA-rich Low_complexity Low_complexity 1 100 0 880 176 38 6 chr2 58521877 58522036 -194734547 - MLT1A2 LTR MaLR -210 164 1 421 255 102 30 chr2 58522037 58522272 -194734311 - L1MCc LINE L1 -6105 318 67 2362 91 3 3 chr2 58522761 58523069 -194733514 - AluSp SINE Alu -5 308 1 2184 168 16 47 chr2 58523329 58523437 -194733146 - LTR52 LTR ERVL -3 418 308 2191 107 3 3 chr2 58523437 58523735 -194732848 - AluSx SINE Alu -14 298 1 2184 168 16 47 chr2 58523735 58524055 -194732528 - LTR52 LTR ERVL -113 308 3 1885 148 26 22 chr2 58524657 58524968 -194731615 - AluSx SINE Alu 0 312 1 695 297 78 34 chr2 58524968 58525325 -194731258 - L2 LINE L2 -1839 1475 1103 757 197 94 63 chr2 58525325 58525382 -194731201 + MLT1A2 LTR MaLR 1 55 -319 1949 114 64 7 chr2 58525382 58525663 -194730920 + AluSx SINE Alu 7 303 -9 757 197 94 63 chr2 58525663 58525922 -194730661 + MLT1A2 LTR MaLR 55 302 -72 292 304 23 13 chr2 58526308 58526520 -194730063 + G-rich Low_complexity Low_complexity 1 214 0 17387 68 3 2 chr2 58526593 58528898 -194727685 - L1P LINE L1 -2156 3990 1683 13354 232 102 24 chr2 58529069 58532539 -194724044 - L1P4 LINE L1 -689 6914 3716 4526 121 22 49 chr2 58532539 58533249 -194723334 + LTR8 LTR ERV1 1 691 0 13354 232 102 24 chr2 58533249 58536148 -194720435 - L1P4 LINE L1 -3887 3716 86 1427 57 0 0 chr2 58536152 58536327 -194720256 + AluY SINE Alu 130 304 -7 275 254 32 0 chr2 58536333 58536396 -194720187 - L1P4 LINE L1 -7501 80 16 1562 152 23 23 chr2 58536396 58536699 -194719884 - AluJb SINE Alu -9 303 1 660 260 34 48 chr2 58536951 58537159 -194719424 - MIR SINE MIR -56 206 2 6171 161 33 11 chr2 58538241 58540370 -194716213 - L1MA9 LINE L1 -35 6277 4094 44047 44 8 2 chr2 58540443 58546566 -194710017 - L1PA4 LINE L1 0 6155 1 21 0 0 0 chr2 58546888 58546909 -194709674 + AT_rich Low_complexity Low_complexity 1 21 0 545 278 44 50 chr2 58547084 58547264 -194709319 + MIR SINE MIR 74 252 -10 224 339 77 23 chr2 58547673 58547803 -194708780 - MIR SINE MIR -54 208 72 245 307 115 73 chr2 58547909 58548447 -194708136 + L2 LINE L2 2699 3243 -29 194 258 32 32 chr2 58548998 58549060 -194707523 - MIR3 SINE MIR -3 205 144 216 0 0 0 chr2 58549394 58549418 -194707165 + (A)n Simple_repeat Simple_repeat 1 24 0 787 159 48 69 chr2 58550925 58551114 -194705469 + MER53 DNA DNA 5 189 0 304 246 118 36 chr2 58551933 58552043 -194704540 + LTR67 LTR ERVL 99 217 -340 256 289 58 25 chr2 58552234 58552355 -194704228 + LTR67 LTR ERVL 433 557 0 1124 151 0 114 chr2 58552390 58552635 -194703948 + MER20 DNA MER1_type 2 218 -1 229 239 45 114 chr2 58552794 58552882 -194703701 + MER104 DNA Tc2 14 86 -1812 2263 118 0 6 chr2 58552882 58553196 -194703387 - AluSx SINE Alu 0 312 1 229 239 45 114 chr2 58553196 58553283 -194703300 + MER104 DNA Tc2 86 177 -3 215 207 224 0 chr2 58553427 58553485 -194703098 + MER5B DNA MER1_type 107 177 -1 2376 96 0 3 chr2 58557037 58557350 -194699233 - AluSx SINE Alu 0 312 1 592 257 9 0 chr2 58557543 58557656 -194698927 - MER81 DNA DNA 0 114 1 190 156 311 0 chr2 58558503 58558548 -194698035 + L2 LINE L2 3241 3299 -14 1143 144 18 65 chr2 58559480 58559709 -194696874 - MER20 DNA MER1_type 0 219 2 501 190 25 16 chr2 58560232 58560353 -194696230 + L1ME2 LINE L1 6026 6147 -17 189 154 0 0 chr2 58560385 58560424 -194696159 + (TA)n Simple_repeat Simple_repeat 2 40 0 5191 88 30 36 chr2 58560562 58560692 -194695891 - L1PA15 LINE L1 -3 6162 6033 2316 87 0 34 chr2 58560692 58561013 -194695570 - AluSx SINE Alu -2 310 1 5191 88 30 36 chr2 58561013 58561636 -194694947 - L1PA15 LINE L1 -132 6033 5413 4689 115 6 36 chr2 58561662 58562456 -194694127 - L1PA16 LINE L1 -9 6157 5388 6384 89 4 1 chr2 58562460 58563446 -194693137 - L1PB1 LINE L1 0 6151 5164 2080 184 0 0 chr2 58563443 58563840 -194692743 + L1 LINE L1 3879 4275 -1871 * 1912 117 19 0 chr2 58563834 58564233 -194692350 - L1P LINE L1 -736 5429 5025 * 360 0 0 0 chr2 58564256 58564296 -194692287 + (TAAA)n Simple_repeat Simple_repeat 3 42 0 306 50 0 0 chr2 58564401 58564441 -194692142 + (TTG)n Simple_repeat Simple_repeat 3 42 0 21 0 0 0 chr2 58564972 58564993 -194691590 + AT_rich Low_complexity Low_complexity 1 21 0 874 157 8 8 chr2 58564993 58565127 -194691456 + AluJb SINE Alu 2 135 -177 2730 16 6 16 chr2 58565135 58565456 -194691127 - AluYb8 SINE Alu 0 318 1 2199 127 3 0 chr2 58565538 58565846 -194690737 + AluSp SINE Alu 3 311 -2 287 254 0 0 chr2 58566051 58566114 -194690469 + HAL1 LINE L1 806 868 -1639 450 191 148 9 chr2 58566177 58566292 -194690291 + HAL1 LINE L1 1617 1747 -760 42216 38 3 0 chr2 58566336 58572490 -194684093 + L1PA4 LINE L1 2 6166 0 298 293 95 44 chr2 58572490 58572763 -194683820 + HAL1 LINE L1 1793 2079 -428 296 158 29 70 chr2 58572828 58573052 -194683531 + (TA)n Simple_repeat Simple_repeat 1 214 0 247 200 21 143 chr2 58573231 58573371 -194683212 + HAL1 LINE L1 2375 2497 -10 24 0 0 0 chr2 58573385 58573409 -194683174 + AT_rich Low_complexity Low_complexity 1 24 0 1086 339 61 10 chr2 58574817 58575393 -194681190 - L2 LINE L2 -639 2675 2071 888 126 0 0 chr2 58575393 58575512 -194681071 + AluSq/x SINE Alu 1 119 -194 461 234 75 114 chr2 58575538 58576063 -194680520 - MER34 LTR ERV1 -57 485 1 425 116 35 47 chr2 58576095 58576181 -194680402 - L2 LINE L2 -4 3309 3225 389 331 27 62 chr2 58576208 58576546 -194680037 - L2 LINE L2 -1378 1936 1611 2144 117 0 13 chr2 58576548 58576864 -194679719 + AluSx SINE Alu 1 312 0 333 118 0 0 chr2 58577341 58577392 -194679191 + (CATA)n Simple_repeat Simple_repeat 4 54 0 292 302 103 24 chr2 58577876 58577915 -194678668 + MIR SINE MIR 20 54 -208 2233 104 10 0 chr2 58577915 58578212 -194678371 - AluSg SINE Alu -10 300 1 292 302 103 24 chr2 58578212 58578298 -194678285 + MIR SINE MIR 54 155 -107 321 267 23 5 chr2 58578301 58578447 -194678136 - MIR SINE MIR -44 218 2 927 123 31 6 chr2 58578529 58578691 -194677892 + L1MB3 LINE L1 6014 6179 -4 26 30 0 0 chr2 58579187 58579220 -194677363 + AT_rich Low_complexity Low_complexity 1 33 0 33 56 0 0 chr2 58579272 58579326 -194677257 + AT_rich Low_complexity Low_complexity 1 54 0 262 319 151 17 chr2 58580236 58580355 -194676228 - L2 LINE L2 -6 3266 3132 2161 211 13 32 chr2 58580389 58580919 -194675664 - MER44D DNA MER2_type -30 575 1 189 0 0 0 chr2 58580925 58580946 -194675637 + (TG)n Simple_repeat Simple_repeat 2 22 0 182 294 181 34 chr2 58580999 58581292 -194675291 - L2 LINE L2 -342 2972 2637 593 217 39 89 chr2 58581418 58581598 -194674985 + L2 LINE L2 3142 3312 -1 1392 194 68 58 chr2 58582232 58582680 -194673903 - MLT1C LTR MaLR -8 459 5 23 33 0 0 chr2 58584320 58584350 -194672233 + AT_rich Low_complexity Low_complexity 1 30 0 444 319 138 13 chr2 58584350 58584582 -194672001 - MIR SINE MIR 0 262 2 6156 72 42 48 chr2 58585820 58587653 -194668930 + SVA Other Other 9 1386 0 331 303 132 26 chr2 58588936 58589088 -194667495 + MIR3 SINE MIR 38 205 -3 243 0 0 0 chr2 58589239 58589266 -194667317 + (TG)n Simple_repeat Simple_repeat 1 27 0 747 240 63 28 chr2 58589285 58589667 -194666916 + MLT1J2 LTR MaLR 3 432 -18 252 232 14 58 chr2 58589939 58590008 -194666575 + L2 LINE L2 3207 3272 0 956 119 0 0 chr2 58590161 58590287 -194666296 + AluSq SINE Alu 135 260 -53 826 209 4 7 chr2 58590287 58590555 -194666028 + GA-rich Low_complexity Low_complexity 1 267 0 395 250 189 10 chr2 58590829 58591025 -194665558 + MIR SINE MIR 7 237 -25 349 340 68 0 chr2 58591125 58591272 -194665311 + MIR3 SINE MIR 48 204 -4 181 219 78 16 chr2 58591311 58591375 -194665208 - L3b LINE CR1 -115 1468 1401 182 239 22 0 chr2 58591748 58591794 -194664789 + L2 LINE L2 3263 3309 -4 858 268 76 39 chr2 58591882 58592393 -194664190 + MLT1H LTR MaLR 1 541 -14 1820 200 67 19 chr2 58592681 58593146 -194663437 - MLT1F LTR MaLR 0 542 56 1024 257 66 6 chr2 58593322 58593641 -194662942 - MER46C DNA MER2_type 0 338 1 735 291 45 28 chr2 58594283 58594621 -194661962 + L1MC/D LINE L1 5311 5661 -2147 2371 136 5 19 chr2 58594621 58594990 -194661593 + THE1B LTR MaLR 1 364 0 735 291 45 28 chr2 58594990 58595119 -194661464 + L1MC/D LINE L1 5661 5786 -2022 520 256 9 78 chr2 58595120 58595339 -194661244 + MER58C DNA MER1_type 2 205 -10 219 381 21 10 chr2 58595636 58595733 -194660850 - L3 LINE CR1 -1 1576 1479 292 241 27 62 chr2 58597343 58597455 -194659128 + MIR SINE MIR 98 205 -57 1381 180 36 62 chr2 58597529 58597835 -194658748 + AluJo SINE Alu 1 298 -14 1688 165 7 7 chr2 58597994 58598267 -194658316 + AluJb SINE Alu 1 273 -39 777 169 0 22 chr2 58598268 58598451 -194658132 + GA-rich Low_complexity Low_complexity 1 179 0 481 216 137 0 chr2 58600443 58600589 -194655994 + FLAM_A SINE Alu 1 160 0 998 218 42 90 chr2 58600747 58601040 -194655543 + MLT1E2 LTR MaLR 56 362 -264 2425 187 90 4 chr2 58601040 58601553 -194655030 - MER74A LTR ERVL 0 558 2 998 218 42 90 chr2 58601553 58601656 -194654927 + MLT1E2 LTR MaLR 362 468 -158 186 43 0 0 chr2 58601656 58601679 -194654904 + (CATGC)n Simple_repeat Simple_repeat 5 27 0 998 218 42 90 chr2 58601679 58601777 -194654806 + MLT1E2 LTR MaLR 468 626 0 371 298 66 33 chr2 58602303 58602454 -194654129 - L2 LINE L2 0 3313 3158 1941 121 4 0 chr2 58602580 58602845 -194653738 + AluSx SINE Alu 28 293 -19 269 174 29 14 chr2 58602889 58602958 -194653625 + L1MC1 LINE L1 6264 6333 0 2364 108 0 0 chr2 58602964 58603270 -194653313 + AluSg SINE Alu 1 306 -4 2480 136 26 23 chr2 58603275 58603702 -194652881 + MSTA LTR MaLR 1 428 0 305 307 168 29 chr2 58603759 58604003 -194652580 + L1ME3A LINE L1 1066 1343 -4862 403 246 120 64 chr2 58604289 58604647 -194651936 + L1ME3A LINE L1 1918 2256 -3959 2256 242 69 76 chr2 58604666 58604793 -194651790 + L1ME3A LINE L1 2323 2449 -3766 2027 136 0 4 chr2 58604793 58605097 -194651486 + AluSq SINE Alu 6 308 0 2256 242 69 76 chr2 58605097 58605314 -194651269 + L1ME3A LINE L1 2449 2666 -3549 2236 125 0 0 chr2 58605314 58605611 -194650972 + AluSx SINE Alu 1 297 -15 2256 242 69 76 chr2 58605611 58606741 -194649842 + L1ME3A LINE L1 2666 3789 -2426 1108 208 63 33 chr2 58606741 58606996 -194649587 + MLT2B1 LTR ERVL 1 247 -268 2559 49 7 0 chr2 58606996 58607303 -194649280 - AluY SINE Alu -2 309 1 1108 208 63 33 chr2 58607303 58607495 -194649088 + MLT2B1 LTR ERVL 247 507 -8 2340 244 65 52 chr2 58607498 58608463 -194648120 + L1ME3A LINE L1 3784 4772 -1443 1821 190 43 35 chr2 58608463 58608926 -194647657 - MLT1C LTR MaLR 0 467 1 2340 244 65 52 chr2 58608926 58609230 -194647353 + L1ME3A LINE L1 4772 5070 -1145 382 292 83 0 chr2 58609257 58609425 -194647158 + L1ME3A LINE L1 5130 5311 -904 5099 114 29 41 chr2 58609426 58609785 -194646798 - Tigger1 DNA MER2_type 0 2418 2056 1795 173 3 19 chr2 58609785 58610092 -194646491 + AluJo SINE Alu 1 302 -10 5099 114 29 41 chr2 58610092 58610635 -194645948 - Tigger1 DNA MER2_type -362 2056 1527 922 229 5 0 chr2 58610657 58610849 -194645734 - MLT1A1 LTR MaLR -122 243 51 5579 112 45 18 chr2 58610862 58611684 -194644899 - L1PA11 LINE L1 0 6174 5375 2226 116 0 0 chr2 58611684 58611991 -194644592 - AluSx SINE Alu 0 307 1 5579 112 45 18 chr2 58611991 58612256 -194644327 - L1PA11 LINE L1 -799 5375 5118 2433 80 0 6 chr2 58612256 58612569 -194644014 - AluY SINE Alu 0 311 1 5579 112 45 18 chr2 58612569 58613238 -194643345 - L1PA11 LINE L1 -1056 5118 4376 7105 127 30 36 chr2 58613238 58614419 -194642164 - Tigger1 DNA MER2_type -1243 1175 2 1095 242 37 96 chr2 58614436 58614991 -194641592 + L1ME3A LINE L1 5326 5912 -321 642 218 8 8 chr2 58614991 58615115 -194641468 - FLAM_A SINE Alu -9 124 1 1095 242 37 96 chr2 58615115 58615201 -194641382 + L1ME3A LINE L1 5912 5906 -327 2205 79 18 4 chr2 58615201 58615480 -194641103 - AluSq SINE Alu -20 293 11 1095 242 37 96 chr2 58615480 58615585 -194640998 + L1ME3A LINE L1 5905 6015 -218 363 221 66 119 chr2 58615635 58615861 -194640722 + L1ME3A LINE L1 6003 6216 -23 22 35 0 0 chr2 58615865 58615894 -194640689 + AT_rich Low_complexity Low_complexity 1 29 0 236 315 116 87 chr2 58616209 58616698 -194639885 - L2 LINE L2 -838 2476 1954 2150 137 62 14 chr2 58616698 58617056 -194639527 + THE1C LTR MaLR 1 375 0 236 315 116 87 chr2 58617056 58617341 -194639242 - L2 LINE L2 -1360 1954 1679 2089 121 0 7 chr2 58618031 58618320 -194638263 + AluSx SINE Alu 21 307 -5 182 280 107 40 chr2 58618342 58618417 -194638166 - MIR3 SINE MIR -42 166 87 43873 36 21 3 chr2 58618497 58624580 -194632003 + L1PA3 LINE L1 1 6155 0 2146 109 0 0 chr2 58626509 58626821 -194629762 + AluSx SINE Alu 1 312 0 2528 80 3 0 chr2 58628520 58628832 -194627751 + AluSp SINE Alu 1 313 0 429 317 22 22 chr2 58629034 58629217 -194627366 + MIR SINE MIR 23 205 -57 533 254 159 18 chr2 58629240 58629460 -194627123 - MIR SINE MIR 0 262 12 229 204 61 0 chr2 58629478 58629527 -194627056 + L2 LINE L2 3244 3295 -18 594 167 0 2 chr2 58629596 58629847 -194626736 + AluJ SINE Alu 1 300 -12 258 105 0 0 chr2 58629847 58629885 -194626698 + (GA)n Simple_repeat Simple_repeat 1 38 0 750 164 0 69 chr2 58630027 58630048 -194626535 + L1M4 LINE L1 3680 3701 -2445 2125 147 0 0 chr2 58630048 58630360 -194626223 + AluSx SINE Alu 1 312 0 750 164 0 69 chr2 58630360 58630497 -194626086 + L1M4 LINE L1 3701 3827 -2319 23 33 0 0 chr2 58632007 58632037 -194624546 + AT_rich Low_complexity Low_complexity 1 30 0 2396 99 0 0 chr2 58632741 58633045 -194623538 + AluSg SINE Alu 1 304 -6 285 230 0 58 chr2 58633345 58633432 -194623151 + MLT1L LTR MaLR 119 200 -415 1439 230 137 27 chr2 58633579 58633987 -194622596 + MLT1F LTR MaLR 1 453 -89 1792 163 0 28 chr2 58634008 58634327 -194622256 - AluJb SINE Alu -2 310 1 820 182 6 6 chr2 58634344 58634503 -194622080 + FRAM SINE Alu 1 159 -17 2082 113 3 3 chr2 58634510 58634841 -194621742 + AluSx SINE Alu 1 331 0 2164 130 0 0 chr2 58634853 58635146 -194621437 + AluSx SINE Alu 1 293 -19 325 191 16 0 chr2 58635146 58635209 -194621374 + MLT1F LTR MaLR 504 567 0 321 231 58 29 chr2 58635294 58635398 -194621185 + MLT1L LTR MaLR 485 591 -24 378 0 0 0 chr2 58635712 58635754 -194620829 + (TG)n Simple_repeat Simple_repeat 1 42 0 1697 188 3 3 chr2 58635767 58636049 -194620534 - AluJb SINE Alu -30 282 1 211 241 66 51 chr2 58637498 58637627 -194618956 + MIR SINE MIR 39 164 -63 217 271 141 0 chr2 58637804 58637889 -194618694 + MIR SINE MIR 166 262 0 355 234 13 0 chr2 58637897 58637974 -194618609 + MIR SINE MIR 78 155 -107 785 187 0 15 chr2 58638589 58638723 -194617860 + FLAM_C SINE Alu 1 132 -1 991 209 4 28 chr2 58638738 58638992 -194617591 - L1MA7 LINE L1 -6 6285 6038 876 268 79 26 chr2 58638998 58639338 -194617245 + L1ME3A LINE L1 5808 6165 -5 26 0 0 0 chr2 58640047 58640073 -194616510 + AT_rich Low_complexity Low_complexity 1 26 0 476 325 44 68 chr2 58640118 58640484 -194616099 - L2 LINE L2 0 3272 2916 318 256 98 23 chr2 58640531 58640664 -194615919 + L1ME4a LINE L1 5969 6111 -10 315 27 27 55 chr2 58640812 58640885 -194615698 + (TTTA)n Simple_repeat Simple_repeat 1 71 0 615 242 8 15 chr2 58640885 58641017 -194615566 - FRAM SINE Alu -45 131 1 463 233 39 39 chr2 58641206 58641335 -194615248 - MIR SINE MIR -81 181 53 1866 119 0 34 chr2 58641341 58641610 -194614973 - AluSq SINE Alu -53 260 1 1062 187 11 11 chr2 58641878 58642065 -194614518 - MER5A DNA MER1_type -1 188 2 23 0 0 0 chr2 58642296 58642319 -194614264 + AT_rich Low_complexity Low_complexity 1 23 0 567 100 30 40 chr2 58642670 58642770 -194613813 - L1MC4 LINE L1 -764 7278 7180 2234 112 6 3 chr2 58642934 58643246 -194613337 + AluSq SINE Alu 1 313 0 2448 68 7 0 chr2 58644136 58644431 -194612152 + AluSq SINE Alu 1 297 -16 303 323 168 24 chr2 58644463 58644928 -194611655 + L2 LINE L2 2444 2975 -339 323 348 118 38 chr2 58645018 58645157 -194611426 + L2 LINE L2 2958 3084 -188 2051 114 11 0 chr2 58645157 58645458 -194611125 - AluSx SINE Alu 0 304 1 323 348 118 38 chr2 58645458 58645604 -194610979 + L2 LINE L2 3084 3267 -5 1922 141 0 7 chr2 58645772 58646049 -194610534 + AluSx SINE Alu 1 275 -37 207 0 0 0 chr2 58646054 58646077 -194610506 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 24 0 0 0 chr2 58646465 58646489 -194610094 + AT_rich Low_complexity Low_complexity 1 24 0 604 296 64 92 chr2 58646846 58646919 -194609664 + L2 LINE L2 2805 2878 -394 2135 100 18 0 chr2 58646919 58647200 -194609383 + AluSx SINE Alu 1 286 -26 604 296 64 92 chr2 58647200 58647596 -194608987 + L2 LINE L2 2878 3261 -11 279 79 0 0 chr2 58647600 58647638 -194608945 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 3055 179 10 66 chr2 58647679 58648299 -194608284 - MER77 LTR ERV1 -15 590 6 2122 123 13 7 chr2 58648875 58649220 -194607363 + AluSq SINE Alu 2 348 0 1055 40 0 0 chr2 58649324 58649449 -194607134 - L1PA10 LINE L1 -450 5718 5594 3491 65 19 0 chr2 58649452 58649881 -194606702 + L1PA10 LINE L1 5726 6164 -4 2332 93 0 0 chr2 58650040 58650341 -194606242 - AluSx SINE Alu -11 301 1 1956 166 101 3 chr2 58650388 58650726 -194605857 + MER93b LTR ERV1 3 373 0 2028 124 3 13 chr2 58651176 58651475 -194605108 + AluSx SINE Alu 1 296 -16 1716 112 52 4 chr2 58651548 58651841 -194604742 - AluSg SINE Alu 0 306 1 2448 52 10 7 chr2 58652267 58652574 -194604009 + AluY SINE Alu 1 308 -3 21 0 0 0 chr2 58653717 58653738 -194602845 + AT_rich Low_complexity Low_complexity 1 21 0 822 164 1 3 chr2 58654096 58654248 -194602335 + L1MB7 LINE L1 5717 5866 -318 260 305 11 42 chr2 58654282 58654377 -194602206 + L2 LINE L2 943 1034 -2280 232 45 0 45 chr2 58654386 58654430 -194602153 + (TTTTTA)n Simple_repeat Simple_repeat 4 45 0 6474 31 9 4 chr2 58654441 58655180 -194601403 - SVA Other Other -2 1384 642 285 239 0 0 chr2 58655185 58655256 -194601327 + L2 LINE L2 1037 1107 -2207 974 166 12 6 chr2 58655256 58655425 -194601158 - MLT1B LTR MaLR 0 390 221 10476 153 12 21 chr2 58655525 58657315 -194599268 - L1P LINE L1 -4362 1784 11 1468 186 0 4 chr2 58657364 58657611 -194598972 - AluJb SINE Alu -66 246 1 4301 104 108 5 chr2 58657612 58658239 -194598344 + L1PA15 LINE L1 5461 6152 -13 235 343 28 9 chr2 58660041 58660149 -194596434 - L2 LINE L2 -239 3033 2924 325 254 88 18 chr2 58660150 58660264 -194596319 + L2 LINE L2 1912 2033 -1281 1235 347 52 30 chr2 58660265 58661070 -194595513 + L2 LINE L2 2155 2977 -337 1214 279 34 22 chr2 58661337 58661752 -194594831 - LTR16A LTR ERVL -10 440 21 610 343 110 12 chr2 58661822 58662251 -194594332 - L2 LINE L2 -557 2757 2287 583 115 10 10 chr2 58664223 58664327 -194592256 + (TTTC)n Simple_repeat Simple_repeat 4 107 0 960 115 8 0 chr2 58664344 58664474 -194592109 - FRAM SINE Alu -32 144 14 2006 139 53 114 chr2 58664705 58665179 -194591404 - MER65A LTR ERV1 0 445 1 1415 180 96 4 chr2 58665198 58665470 -194591113 - AluJo SINE Alu -12 300 4 1459 245 48 3 chr2 58665475 58665830 -194590753 - MER65A-int LTR ERV1 0 4871 4501 682 159 0 9 chr2 58665834 58665941 -194590642 - MER65A-int LTR ERV1 -1161 3710 3605 305 168 251 56 chr2 58665965 58666097 -194590486 - MER65A-int LTR ERV1 -958 5373 3884 * 2886 208 77 76 chr2 58666096 58666613 -194589970 - MER65A-int LTR ERV1 -1124 4021 3506 1952 122 0 18 chr2 58666613 58666929 -194589654 + AluSx SINE Alu 1 311 0 2886 208 77 76 chr2 58666929 58667863 -194588720 - MER65A-int LTR ERV1 -1639 3506 2469 788 179 47 47 chr2 58667947 58668181 -194588402 - MER65A-int LTR ERV1 -2872 3726 3493 289 125 21 75 chr2 58668391 58668483 -194588100 - MER65A-int LTR ERV1 -2514 3479 2518 857 117 0 0 chr2 58668483 58668603 -194587980 + AluSg/x SINE Alu 171 290 -20 1491 175 63 91 chr2 58668604 58669250 -194587333 - MER65A-int LTR ERV1 -2598 2525 1574 1005 199 9 43 chr2 58669348 58669559 -194587024 - AluJo SINE Alu -24 288 85 7929 208 64 51 chr2 58669587 58670971 -194585612 - MER65A-int LTR ERV1 -2377 2494 1063 1903 159 0 10 chr2 58670971 58671273 -194585310 + AluJo SINE Alu 4 302 -10 7929 208 64 51 chr2 58671273 58672297 -194584286 - MER65A-int LTR ERV1 -3808 1063 54 2276 135 72 35 chr2 58672352 58672781 -194583802 - MER65A LTR ERV1 0 445 1 621 225 110 64 chr2 58672853 58673089 -194583494 + MIR SINE MIR 15 261 -1 2244 115 107 15 chr2 58673459 58673851 -194582732 - MSTA LTR MaLR 0 428 1 312 65 22 0 chr2 58674283 58674329 -194582254 + MADE1 DNA Mariner 34 80 0 1160 87 0 12 chr2 58674382 58674555 -194582028 - L1MA5 LINE L1 -2 6298 6128 439 289 29 20 chr2 58674596 58674800 -194581783 - L1ME4a LINE L1 -232 5889 5684 612 250 166 21 chr2 58675163 58675448 -194581135 + MLT1J1 LTR MaLR 1 318 -132 589 307 92 28 chr2 58675477 58675803 -194580780 + L2 LINE L2 2442 2788 -526 276 300 70 97 chr2 58675907 58676045 -194580538 + L2 LINE L2 2870 3001 -271 2831 3 0 0 chr2 58676045 58676349 -194580234 - AluYa5 SINE Alu -7 304 1 276 300 70 97 chr2 58676349 58676437 -194580146 + L2 LINE L2 3001 3090 -182 233 313 167 13 chr2 58676776 58676926 -194579657 + L2 LINE L2 2920 3092 -180 401 281 98 37 chr2 58676926 58677090 -194579493 + MIR SINE MIR 19 192 -70 514 293 30 15 chr2 58677163 58677296 -194579287 + L2 LINE L2 3136 3270 -2 223 289 0 0 chr2 58677699 58677744 -194578839 + MER91 DNA MER1_type 152 196 0 3409 197 54 8 chr2 58677760 58678597 -194577986 - MER69 DNA AcHobo 0 2526 1652 2566 241 84 6 chr2 58678626 58679269 -194577314 - MER69 DNA AcHobo -533 693 1 567 272 175 18 chr2 58679717 58680059 -194576524 + LTR16C LTR ERVL 96 491 0 30 0 0 0 chr2 58680990 58681020 -194575563 + AT_rich Low_complexity Low_complexity 1 30 0 2103 170 72 8 chr2 58681321 58681721 -194574862 - MSTB LTR MaLR 0 426 1 1739 182 3 3 chr2 58682973 58683264 -194573319 - AluJb SINE Alu -19 293 3 284 303 87 0 chr2 58683267 58683400 -194573183 - MIR SINE MIR -21 187 37 1981 160 56 45 chr2 58683884 58684231 -194572352 + L1MB5 LINE L1 5716 6071 -103 1761 91 50 124 chr2 58684231 58684595 -194571988 - MER1B DNA MER1_type 0 337 1 1981 160 56 45 chr2 58684595 58684692 -194571891 + L1MB5 LINE L1 6071 6165 -9 180 0 0 0 chr2 58684829 58684849 -194571734 + (TA)n Simple_repeat Simple_repeat 2 21 0 25 0 0 0 chr2 58685619 58685644 -194570939 + AT_rich Low_complexity Low_complexity 1 25 0 271 338 0 0 chr2 58687746 58687823 -194568760 + L2 LINE L2 3150 3226 -46 569 267 112 22 chr2 58687884 58688116 -194568467 - L2 LINE L2 0 3313 3061 22 0 0 0 chr2 58688199 58688221 -194568362 + AT_rich Low_complexity Low_complexity 1 22 0 225 350 24 41 chr2 58688352 58688475 -194568108 + L2 LINE L2 3173 3293 -20 27 49 0 0 chr2 58688620 58688661 -194567922 + AT_rich Low_complexity Low_complexity 1 41 0 23 54 0 0 chr2 58688912 58688949 -194567634 + AT_rich Low_complexity Low_complexity 1 37 0 575 251 37 37 chr2 58690068 58690255 -194566328 + MIR SINE MIR 66 252 -10 279 0 0 0 chr2 58690282 58690313 -194566270 + (CAA)n Simple_repeat Simple_repeat 3 33 0 185 289 62 83 chr2 58691172 58691414 -194565169 - L2 LINE L2 -188 3084 2848 186 43 0 0 chr2 58691708 58691731 -194564852 + (CAA)n Simple_repeat Simple_repeat 2 24 0 286 242 15 15 chr2 58691857 58691923 -194564660 - L2 LINE L2 0 3272 3207 199 350 110 50 chr2 58691930 58692130 -194564453 + L2 LINE L2 3045 3256 -16 182 349 64 28 chr2 58692136 58692245 -194564338 - MIR SINE MIR -68 194 82 324 0 0 0 chr2 58692707 58692743 -194563840 + (CA)n Simple_repeat Simple_repeat 1 36 0 365 240 48 29 chr2 58693700 58693804 -194562779 - MIR SINE MIR -117 145 40 23 0 0 0 chr2 58694357 58694380 -194562203 + AT_rich Low_complexity Low_complexity 1 23 0 233 29 29 0 chr2 58694766 58694800 -194561783 + (TA)n Simple_repeat Simple_repeat 2 36 0 51 31 0 0 chr2 58694800 58694865 -194561718 + AT_rich Low_complexity Low_complexity 1 65 0 219 274 123 0 chr2 58694898 58694971 -194561612 + MIR SINE MIR 42 123 -85 279 0 0 0 chr2 58694976 58695007 -194561576 + (CA)n Simple_repeat Simple_repeat 2 32 0 417 295 70 50 chr2 58695663 58695863 -194560720 - MIR3 SINE MIR 0 208 5 * 455 263 158 0 chr2 58695858 58696010 -194560573 - MER5A DNA MER1_type -6 183 8 324 120 0 0 chr2 58696397 58696447 -194560136 + (TA)n Simple_repeat Simple_repeat 1 50 0 262 278 28 0 chr2 58697900 58697972 -194558611 + MIR SINE MIR 79 152 -110 207 0 0 0 chr2 58698299 58698322 -194558261 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 186 240 227 0 chr2 58698393 58698468 -194558115 + MIR SINE MIR 47 138 -124 734 251 90 59 chr2 58698600 58698923 -194557660 + L2 LINE L2 2977 3309 -4 467 259 28 0 chr2 58699038 58699146 -194557437 + L2 LINE L2 3201 3311 -2 196 380 141 16 chr2 58699163 58699284 -194557299 - L2 LINE L2 -12 3260 3125 447 237 90 19 chr2 58699345 58699559 -194557024 + MER5C DNA MER1_type 4 324 0 333 321 82 33 chr2 58699559 58699742 -194556841 - L2 LINE L2 -185 3087 2896 230 330 25 8 chr2 58700462 58700580 -194556003 - L2 LINE L2 -1 3312 3193 355 281 211 5 chr2 58700719 58700904 -194555679 - MIR SINE MIR -37 225 3 406 288 0 34 chr2 58704462 58704580 -194552003 + L2 LINE L2 3200 3313 0 352 160 146 139 chr2 58706724 58706868 -194549715 - MIR SINE MIR -70 192 48 1980 131 0 3 chr2 58707975 58708257 -194548326 - AluSg SINE Alu -9 301 21 1826 255 62 23 chr2 58709233 58710422 -194546161 + L1MEc LINE L1 1858 3044 -3171 912 133 0 0 chr2 58710589 58710740 -194545843 - L1PA14 LINE L1 0 6161 6011 383 347 108 0 chr2 58710741 58710908 -194545675 + L3 LINE CR1 1277 1461 -116 21 36 0 0 chr2 58712931 58712959 -194543624 + AT_rich Low_complexity Low_complexity 1 28 0 522 316 69 48 chr2 58713074 58713305 -194543278 + MIR SINE MIR 14 249 -13 2487 37 7 0 chr2 58715185 58715481 -194541102 - AluY SINE Alu -13 298 1 316 293 230 26 chr2 58716480 58716896 -194539687 + L2 LINE L2 2751 3264 -8 23 33 0 0 chr2 58717371 58717401 -194539182 + AT_rich Low_complexity Low_complexity 1 30 0 25 65 0 0 chr2 58718010 58718056 -194538527 + AT_rich Low_complexity Low_complexity 1 46 0 1270 231 207 47 chr2 58721333 58721844 -194534739 + MLT1E LTR MaLR 1 593 0 202 336 58 19 chr2 58722655 58722759 -194533824 - MIR SINE MIR -60 148 41 365 258 174 15 chr2 58723113 58723245 -194533338 + MER5A DNA MER1_type 36 188 -1 246 207 0 0 chr2 58723400 58723458 -194533125 + (TA)n Simple_repeat Simple_repeat 2 59 0 2683 153 19 56 chr2 58724017 58724552 -194532031 + MLT2B2 LTR ERVL 1 515 0 273 57 0 0 chr2 58724608 58724643 -194531940 + (T)n Simple_repeat Simple_repeat 1 35 0 2185 106 0 3 chr2 58725089 58725390 -194531193 - AluSp SINE Alu -13 300 1 2363 100 3 0 chr2 58725864 58726165 -194530418 - AluSx SINE Alu -10 302 1 205 316 26 0 chr2 58726877 58726953 -194529630 + (TATATG)n Simple_repeat Simple_repeat 1 78 0 2251 114 55 16 chr2 58727978 58728363 -194528220 + L1MA7 LINE L1 5892 6291 0 195 255 98 0 chr2 58731047 58731098 -194525485 - MER5A DNA MER1_type 0 189 134 21 95 0 0 chr2 58731131 58731194 -194525389 + AT_rich Low_complexity Low_complexity 1 63 0 744 158 14 14 chr2 58731213 58731352 -194525231 - MER5A DNA MER1_type -50 139 1 2115 131 0 0 chr2 58733370 58733667 -194522916 + AluSx SINE Alu 2 298 -14 2237 123 0 0 chr2 58735749 58736051 -194520532 - AluSx SINE Alu -10 302 1 657 268 72 14 chr2 58736861 58736924 -194519659 + MIR SINE MIR 29 87 -175 693 199 72 18 chr2 58736924 58737090 -194519493 - MER5B DNA MER1_type -3 175 1 657 268 72 14 chr2 58737090 58737235 -194519348 + MIR SINE MIR 87 249 -13 376 301 97 74 chr2 58738462 58738854 -194517729 - L2 LINE L2 -1 3271 2871 665 287 17 6 chr2 58738934 58739115 -194517468 - MER5A DNA MER1_type 0 189 7 302 362 65 0 chr2 58740319 58740457 -194516126 + MIR SINE MIR 46 192 -70 256 246 18 0 chr2 58743458 58743515 -194513068 + G-rich Low_complexity Low_complexity 5 62 0 221 246 70 18 chr2 58743951 58744008 -194512575 - L2 LINE L2 0 3272 3213 1974 124 10 0 chr2 58744077 58744375 -194512208 + L1M2 LINE L1 5488 5788 -503 239 152 51 0 chr2 58744384 58744463 -194512120 + (TA)n Simple_repeat Simple_repeat 2 84 0 248 83 0 0 chr2 58744466 58744502 -194512081 - L1M2 LINE L1 -473 5818 5783 316 362 65 0 chr2 58744669 58744807 -194511776 + MIR SINE MIR 46 192 -70 2227 180 20 24 chr2 58744928 58745185 -194511398 + L1MA7 LINE L1 5795 6051 -240 1825 122 86 4 chr2 58745185 58745463 -194511120 + AluSx SINE Alu 1 301 -11 2227 180 20 24 chr2 58745463 58745704 -194510879 + L1MA7 LINE L1 6051 6291 0 222 331 38 54 chr2 58747066 58747250 -194509333 + L2 LINE L2 3133 3313 0 21 36 0 0 chr2 58747694 58747722 -194508861 + AT_rich Low_complexity Low_complexity 1 28 0 69 48 0 0 chr2 58747888 58747992 -194508591 + AT_rich Low_complexity Low_complexity 1 104 0 377 174 60 81 chr2 58748426 58748575 -194508008 + L1MD3 LINE L1 7850 7995 0 268 300 12 25 chr2 58748894 58748974 -194507609 - L2 LINE L2 -6 3266 3188 1348 87 0 0 chr2 58749542 58749725 -194506858 + AluY SINE Alu 124 306 -5 2768 131 51 9 chr2 58749760 58750209 -194506374 + MER75 DNA T2_type 1 468 -46 1028 243 63 12 chr2 58750311 58750645 -194505938 - L1M4 LINE L1 -2210 3936 3586 611 282 22 44 chr2 58750659 58750975 -194505608 + L1ME LINE L1 5465 5773 -389 225 211 18 18 chr2 58751316 58751373 -194505210 + (TATG)n Simple_repeat Simple_repeat 4 60 0 1786 229 73 0 chr2 58751583 58751994 -194504589 + L2 LINE L2 2225 2665 -649 2311 210 97 13 chr2 58751994 58752738 -194503845 - L1ME1 LINE L1 -226 5940 5147 1175 302 97 56 chr2 58752897 58753973 -194502610 - L1MEd LINE L1 -4988 1131 12 355 370 0 11 chr2 58753983 58754164 -194502419 - L1ME1 LINE L1 -979 5167 4989 25753 56 4 0 chr2 58754265 58758211 -194498372 - L1PA6 LINE L1 -164 5990 2031 1951 161 0 10 chr2 58758611 58758910 -194497673 + AluJb SINE Alu 1 296 -16 284 271 198 0 chr2 58759064 58759160 -194497423 + L2 LINE L2 3195 3309 -4 2279 105 0 0 chr2 58759448 58759744 -194496839 - AluSq SINE Alu -17 296 1 400 317 12 42 chr2 58760465 58760632 -194495951 - L2 LINE L2 -112 3160 2999 2472 108 4 182 chr2 58760640 58761189 -194495394 - MLT2A2 LTR ERVL 0 453 3 311 296 40 40 chr2 58761505 58761657 -194494926 - L2 LINE L2 -1389 1925 1774 577 77 26 0 chr2 58762153 58762231 -194494352 + AluSg/x SINE Alu 215 294 -18 25 51 0 0 chr2 58764006 58764045 -194492538 + AT_rich Low_complexity Low_complexity 1 39 0 396 0 0 0 chr2 58764501 58764545 -194492038 + (TG)n Simple_repeat Simple_repeat 2 45 0 310 284 197 16 chr2 58764719 58764846 -194491737 - MIR3 SINE MIR -23 185 36 234 278 0 0 chr2 58765036 58765090 -194491493 + L2 LINE L2 3137 3190 -82 347 205 90 58 chr2 58766172 58766328 -194490255 - L1ME4a LINE L1 -1 6189 6029 2089 102 0 7 chr2 58767038 58767344 -194489239 - AluSg SINE Alu 0 304 1 2490 62 0 0 chr2 58767452 58767756 -194488827 + AluY SINE Alu 3 306 -5 275 200 18 0 chr2 58767773 58767828 -194488755 + MER69 DNA AcHobo 2468 2523 -3 258 264 42 0 chr2 58768085 58768157 -194488426 - MIR SINE MIR -71 191 117 323 305 69 15 chr2 58769805 58769936 -194486647 - L1MC/D LINE L1 -803 5439 5302 924 235 122 41 chr2 58770309 58770935 -194485648 - L1ME4a LINE L1 -211 6020 5305 1383 175 87 4 chr2 58771183 58771435 -194485148 + AluJb SINE Alu 1 273 -39 180 0 0 0 chr2 58771435 58771455 -194485128 + (TC)n Simple_repeat Simple_repeat 2 21 0 450 0 0 0 chr2 58771460 58771510 -194485073 + (CA)n Simple_repeat Simple_repeat 2 51 0 255 278 144 5 chr2 58771537 58771724 -194484859 - L1ME4a LINE L1 -925 5290 5078 565 289 136 20 chr2 58771786 58772080 -194484503 + MLT1H LTR MaLR 1 328 -221 407 267 25 33 chr2 58772076 58772196 -194484387 + MLT1H LTR MaLR 431 549 0 * 848 94 0 8 chr2 58772327 58772455 -194484128 - L1PB1 LINE L1 -3 6148 6022 2420 85 0 7 chr2 58772455 58772762 -194483821 - AluY SINE Alu -6 305 1 483 288 155 30 chr2 58772797 58773165 -194483418 - L1ME4a LINE L1 -4106 2290 1877 673 267 58 27 chr2 58773216 58773568 -194483015 - L1ME4a LINE L1 -803 1773 1400 279 268 0 0 chr2 58774807 58774863 -194481720 + L2 LINE L2 3244 3299 -14 458 258 178 26 chr2 58828171 58828683 -194427900 - L1ME4a LINE L1 -29 6092 5503 26 82 0 0 chr2 58828784 58828845 -194427738 + AT_rich Low_complexity Low_complexity 1 61 0 195 42 0 0 chr2 58828845 58828869 -194427714 + (GA)n Simple_repeat Simple_repeat 2 25 0 18521 75 1 5 chr2 58830027 58832678 -194423905 - L1P LINE L1 -2536 3610 971 22692 115 32 12 chr2 58832778 58836600 -194419983 - L1P LINE L1 -1317 4829 933 6743 31 14 1 chr2 58837048 58837899 -194418684 - L1PA4 LINE L1 0 6155 5294 1939 32 0 0 chr2 58837897 58838144 -194418439 + L1PA4 LINE L1 5050 5296 -850 * 437 289 214 12 chr2 58838744 58838917 -194417666 - L3 LINE CR1 -3 1574 1367 207 0 0 0 chr2 58839277 58839300 -194417283 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1978 135 0 0 chr2 58839306 58839580 -194417003 - AluSg SINE Alu -36 274 1 371 259 95 95 chr2 58839978 58840294 -194416289 + L2 LINE L2 2955 3270 -2 236 335 38 13 chr2 58841397 58841523 -194415060 - MIR SINE MIR -114 148 20 689 240 32 95 chr2 58841852 58842135 -194414448 - L2 LINE L2 -21 3292 3028 358 302 84 69 chr2 58843265 58843467 -194413116 + MIR3 SINE MIR 1 205 -3 228 331 24 57 chr2 58843643 58843767 -194412816 - L2 LINE L2 -1 3312 3193 227 292 117 33 chr2 58845115 58845235 -194411348 + MIR SINE MIR 47 176 -86 269 206 176 61 chr2 58845914 58846045 -194410538 - Charlie8 DNA MER1_type -2154 263 118 544 272 103 38 chr2 58846171 58846384 -194410199 + MIR SINE MIR 36 262 0 537 309 129 10 chr2 58846466 58846667 -194409916 - MIR SINE MIR -6 256 32 2186 122 98 34 chr2 58846763 58847149 -194409434 - LTR57 LTR ERVL 0 411 1 549 213 35 21 chr2 58848360 58848501 -194408082 + MIR SINE MIR 64 206 -56 273 303 26 13 chr2 58849211 58849287 -194407296 + MIR SINE MIR 3 79 -183 699 211 94 0 chr2 58849335 58849506 -194407077 - MER5A DNA MER1_type -1 188 2 188 355 55 27 chr2 58849698 58849808 -194406775 + MIR SINE MIR 31 143 -119 989 217 1 16 chr2 58849838 58850230 -194406353 + MLT1A2 LTR MaLR 23 374 0 1879 224 86 16 chr2 58851188 58851745 -194404838 + L1ME1 LINE L1 5554 6149 -17 522 298 152 23 chr2 58853227 58853536 -194403047 - L2 LINE L2 -15 3298 2950 591 336 17 20 chr2 58853786 58854134 -194402449 - ERVL LTR ERVL -387 5377 5031 931 154 39 6 chr2 58854268 58854450 -194402133 - ERVL LTR ERVL -1212 4552 4365 1508 170 61 7 chr2 58854553 58854847 -194401736 - ERVL LTR ERVL -1708 4056 3747 * 10185 161 21 12 chr2 58854846 58856965 -194399618 - ERVL LTR ERVL -2684 3080 874 8265 128 24 0 chr2 58857190 58858583 -194398000 - L1P3 LINE L1 -5027 1434 8 9393 231 52 19 chr2 58858591 58863391 -194393192 - L1 LINE L1 -1766 4966 310 1860 155 27 0 chr2 58863391 58863687 -194392896 + AluJb SINE Alu 1 304 -8 9393 231 52 19 chr2 58863687 58863814 -194392769 - L1 LINE L1 -6422 310 189 687 190 0 9 chr2 58864130 58864345 -194392238 - ERVL LTR ERVL -4889 875 574 459 236 14 69 chr2 58864360 58864504 -194392079 - L2 LINE L2 -1025 2289 2154 595 275 88 67 chr2 58864632 58865097 -194391486 - L2 LINE L2 -14 3299 2825 2177 130 85 35 chr2 58865492 58865916 -194390667 + MER65A LTR ERV1 1 445 0 7178 193 48 58 chr2 58866001 58868410 -194388173 + MER65A-int LTR ERV1 83 2494 -2377 458 159 122 47 chr2 58868420 58868527 -194388056 + MER65A-int LTR ERV1 3709 3823 -1113 266 211 14 70 chr2 58868519 58868590 -194387993 + MER65A-int LTR ERV1 5630 5696 -2424 * 342 113 141 0 chr2 58868590 58868663 -194387920 + MER65A-int LTR ERV1 4007 5392 -847 1845 247 65 7 chr2 58868675 58869108 -194387475 + MER65A-int LTR ERV1 3605 4062 -809 1796 246 12 23 chr2 58869103 58869583 -194387000 + MER65A-int LTR ERV1 4397 4871 0 * 2401 133 61 21 chr2 58869583 58870011 -194386572 + MER65A LTR ERV1 1 445 0 572 256 26 19 chr2 58870137 58870206 -194386377 + L2 LINE L2 3153 3220 -93 2149 129 0 3 chr2 58870206 58870500 -194386083 - AluSx SINE Alu -16 296 4 572 256 26 19 chr2 58870500 58870586 -194385997 + L2 LINE L2 3220 3309 -4 1758 156 17 17 chr2 58870707 58870996 -194385587 - AluJo SINE Alu -23 289 1 2250 112 0 0 chr2 58871864 58872160 -194384423 - AluSx SINE Alu -16 296 1 23 33 0 0 chr2 58872193 58872223 -194384360 + AT_rich Low_complexity Low_complexity 1 30 0 604 174 121 0 chr2 58872338 58872401 -194384182 - L1MA10 LINE L1 -10 6324 6270 207 0 0 0 chr2 58872401 58872424 -194384159 + (TA)n Simple_repeat Simple_repeat 2 24 0 604 174 121 0 chr2 58872424 58872492 -194384091 - L1MA10 LINE L1 -64 6270 6177 1912 158 0 0 chr2 58873499 58873791 -194382792 - AluSg SINE Alu -18 292 1 320 305 148 0 chr2 58873899 58874027 -194382556 - MIR SINE MIR -111 151 5 226 213 16 33 chr2 58874118 58874179 -194382404 - L2 LINE L2 -3 3269 3210 268 221 0 15 chr2 58874618 58874686 -194381897 - L1ME4a LINE L1 0 6121 6055 215 289 0 0 chr2 58877081 58877133 -194379450 + MIR SINE MIR 63 114 -148 270 200 9 86 chr2 58878458 58878563 -194378020 - HAL1b LINE L1 -490 858 762 295 286 13 0 chr2 58880572 58880649 -194375934 - L1ME3A LINE L1 -62 6108 6031 2147 88 20 3 chr2 58880693 58880987 -194375596 - AluY SINE Alu -12 299 1 13293 121 15 26 chr2 58881248 58884024 -194372559 + L1PA8A LINE L1 3357 6131 0 189 356 67 33 chr2 58884081 58884171 -194372412 - L2 LINE L2 -6 3266 3174 234 299 26 34 chr2 58884352 58884469 -194372114 + MIR SINE MIR 49 164 -98 404 293 15 91 chr2 58884969 58885167 -194371416 - MER5A DNA MER1_type 0 189 7 211 271 71 47 chr2 58885263 58885348 -194371235 - L2 LINE L2 0 3313 3227 22 0 0 0 chr2 58885966 58885988 -194370595 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 58886058 58886080 -194370503 + AT_rich Low_complexity Low_complexity 1 22 0 229 125 62 0 chr2 58886518 58886566 -194370017 + A-rich Low_complexity Low_complexity 2 52 0 1546 217 32 27 chr2 58886672 58886978 -194369605 - Zaphod DNA AcHobo -5 4026 3716 2375 72 3 0 chr2 58886978 58887282 -194369301 + AluY SINE Alu 1 305 -6 1546 217 32 27 chr2 58887282 58887385 -194369198 - Zaphod DNA AcHobo -315 3716 3615 2344 206 132 43 chr2 58887400 58888244 -194368339 - Zaphod DNA AcHobo -3041 990 72 435 306 65 18 chr2 58888658 58888828 -194367755 + MIR3 SINE MIR 26 203 -5 314 295 36 45 chr2 58889007 58889119 -194367464 - L2 LINE L2 -4 3268 3158 233 29 29 0 chr2 58889344 58889378 -194367205 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2098 42 0 4 chr2 58889378 58889638 -194366945 - L1PA4 LINE L1 -11 6144 5886 1014 181 0 6 chr2 58891059 58891230 -194365353 + AluJb SINE Alu 122 291 -21 257 320 186 13 chr2 58892628 58892784 -194363799 - MIR SINE MIR -48 214 32 292 313 104 8 chr2 58892911 58893045 -194363538 + MIR SINE MIR 7 153 -109 243 79 0 0 chr2 58893644 58893682 -194362901 + (T)n Simple_repeat Simple_repeat 1 38 0 2219 119 0 0 chr2 58894111 58894405 -194362178 + AluSx SINE Alu 1 294 -18 5607 157 35 6 chr2 58894406 58895410 -194361173 + L1P LINE L1 1 1033 -5113 792 201 118 0 chr2 58896224 58896393 -194360190 - MER5A DNA MER1_type 0 189 1 289 284 201 0 chr2 58898071 58898239 -194358344 + L2 LINE L2 2708 2909 -405 531 262 65 6 chr2 58898239 58898407 -194358176 - MER5B DNA MER1_type 0 178 1 2407 74 7 0 chr2 58898851 58899150 -194357433 - AluY SINE Alu -10 301 1 377 252 59 42 chr2 58900706 58900825 -194355758 - MER5A DNA MER1_type -7 182 62 297 0 0 0 chr2 58900989 58901022 -194355561 + (CA)n Simple_repeat Simple_repeat 1 33 0 260 331 52 66 chr2 58901129 58901265 -194355318 + L2 LINE L2 3138 3271 -1 342 296 141 36 chr2 58902369 58902589 -194353994 + MIR SINE MIR 20 262 0 2273 101 0 7 chr2 58904414 58904720 -194351863 - AluSx SINE Alu -8 304 1 331 272 93 37 chr2 58905045 58905207 -194351376 + MIR SINE MIR 58 228 -34 313 286 20 0 chr2 58905246 58905344 -194351239 - MIR SINE MIR -13 249 150 648 188 8 15 chr2 58905902 58906035 -194350548 - L1ME3A LINE L1 -1 6169 6038 1612 180 31 7 chr2 58906707 58906996 -194349587 + AluJo SINE Alu 1 296 -16 283 277 84 0 chr2 58907759 58907842 -194348741 + MIR SINE MIR 34 123 -85 367 291 82 51 chr2 58907884 58908042 -194348541 + MIR SINE MIR 87 249 -13 977 135 59 6 chr2 58908767 58908937 -194347646 + L1PA16 LINE L1 5970 6148 -18 3645 175 32 8 chr2 58908962 58909709 -194346874 + L1MD2 LINE L1 5595 6359 0 181 333 0 18 chr2 58909724 58909781 -194346802 - MIR3 SINE MIR -150 58 3 279 316 0 32 chr2 58909873 58909968 -194346615 + MIR SINE MIR 133 224 -38 23 33 0 0 chr2 58910595 58910625 -194345958 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr2 58910658 58910688 -194345895 + AT_rich Low_complexity Low_complexity 1 30 0 1065 177 16 0 chr2 58911326 58911512 -194345071 - MER5A DNA MER1_type 0 189 1 453 242 20 0 chr2 58912534 58912633 -194343950 + L2 LINE L2 3210 3310 -3 273 299 95 44 chr2 58913876 58914013 -194342570 + MER5B DNA MER1_type 1 144 -45 11527 191 35 20 chr2 58914020 58918018 -194338565 - L1MC1 LINE L1 -6 6607 2434 2405 77 0 7 chr2 58918018 58918315 -194338268 - AluSq SINE Alu -18 295 1 11527 191 35 20 chr2 58918315 58919270 -194337313 - L1MC1 LINE L1 -4179 2434 1495 1539 180 57 15 chr2 58919273 58919607 -194336976 - L1MC1 LINE L1 -6074 352 5 35 24 0 0 chr2 58919678 58919720 -194336863 + AT_rich Low_complexity Low_complexity 1 42 0 39 22 0 0 chr2 58921473 58921519 -194335064 + AT_rich Low_complexity Low_complexity 1 46 0 294 303 50 10 chr2 58922161 58922260 -194334323 - MIR3 SINE MIR -43 165 63 663 261 145 0 chr2 58922397 58922604 -194333979 + MIR SINE MIR 26 262 0 2969 123 10 12 chr2 58922706 58923192 -194333391 + L1MB2 LINE L1 5685 6169 -2 29 60 0 0 chr2 58924416 58924466 -194332117 + AT_rich Low_complexity Low_complexity 1 50 0 25 83 0 0 chr2 58926010 58926070 -194330513 + AT_rich Low_complexity Low_complexity 1 60 0 13800 49 3 0 chr2 58927134 58929658 -194326925 + L1PA5 LINE L1 3635 6154 0 207 306 139 9 chr2 58929938 58930046 -194326537 - MIR SINE MIR -69 139 18 233 254 51 25 chr2 58930329 58930447 -194326136 - L1ME4a LINE L1 -34 6087 5967 27 62 0 0 chr2 58930447 58930495 -194326088 + AT_rich Low_complexity Low_complexity 1 48 0 1501 256 103 22 chr2 58930496 58931274 -194325309 - HAL1b LINE L1 -229 1119 279 35 92 0 0 chr2 58931296 58931394 -194325189 + AT_rich Low_complexity Low_complexity 1 98 0 24 0 0 0 chr2 58932166 58932190 -194324393 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr2 58932266 58932290 -194324293 + AT_rich Low_complexity Low_complexity 1 24 0 24 53 0 0 chr2 58932855 58932893 -194323690 + AT_rich Low_complexity Low_complexity 1 38 0 1273 190 96 86 chr2 58933231 58933704 -194322879 + MER66A LTR ERV1 97 478 0 961 346 103 30 chr2 58934235 58934844 -194321739 + L2 LINE L2 2222 2875 -439 309 230 120 99 chr2 58934975 58935166 -194321417 + L2 LINE L2 3118 3312 -1 218 31 0 31 chr2 58935166 58935198 -194321385 + (GGAA)n Simple_repeat Simple_repeat 1 31 0 2539 102 74 15 chr2 58936625 58937029 -194319554 - MSTA LTR MaLR 0 428 1 781 331 56 6 chr2 58937157 58937480 -194319103 + L3 LINE CR1 1225 1563 -14 1494 146 38 13 chr2 58937809 58938124 -194318459 + MER33 DNA MER1_type 1 323 -1 373 297 213 13 chr2 58938154 58938309 -194318274 - MIR SINE MIR -65 197 12 803 180 0 8 chr2 58938809 58938937 -194317646 + FLAM_C SINE Alu 1 127 -16 273 29 0 0 chr2 58938937 58938971 -194317612 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 2249 169 35 35 chr2 58941975 58942461 -194314122 - MER66B LTR ERV1 0 486 1 1533 136 19 0 chr2 58942824 58943082 -194313501 - L1PA13 LINE L1 -1 6162 5900 2023 125 7 7 chr2 58943267 58943572 -194313011 - AluSx SINE Alu -7 305 1 200 300 0 17 chr2 58943881 58943941 -194312642 + MER5B DNA MER1_type 3 61 -117 2227 110 3 3 chr2 58943944 58944243 -194312340 + AluSq SINE Alu 1 299 -14 1024 260 175 3 chr2 58944285 58944673 -194311910 + L2 LINE L2 2859 3313 0 831 211 50 0 chr2 58944723 58944903 -194311680 + MER5A DNA MER1_type 1 189 0 201 267 100 0 chr2 58945300 58945360 -194311223 + MIR SINE MIR 3 68 -194 769 245 27 0 chr2 58945542 58945726 -194310857 + MER5A DNA MER1_type 1 189 0 2020 134 14 0 chr2 58946858 58947150 -194309433 + AluSx SINE Alu 1 296 -16 667 211 0 8 chr2 58947498 58947626 -194308957 - FLAM_C SINE Alu -16 127 1 495 186 10 29 chr2 58948090 58948192 -194308391 - MER5A DNA MER1_type -83 106 7 2457 71 3 0 chr2 58951101 58951411 -194305172 + AluY SINE Alu 1 311 0 350 262 24 87 chr2 58952247 58952373 -194304210 + MIR3 SINE MIR 79 196 -12 308 82 0 20 chr2 58952581 58952630 -194303953 + (CA)n Simple_repeat Simple_repeat 1 48 0 24 0 0 0 chr2 58953463 58953487 -194303096 + AT_rich Low_complexity Low_complexity 1 24 0 232 282 51 26 chr2 58954189 58954267 -194302316 - L3 LINE CR1 -1 1576 1497 * 647 232 41 91 chr2 58954260 58954480 -194302103 - MIR SINE MIR -21 241 33 347 300 53 93 chr2 58954491 58954738 -194301845 + L2 LINE L2 3077 3313 0 248 361 41 12 chr2 58955960 58956129 -194300454 - MER20B DNA MER1_type -596 187 14 233 143 0 107 chr2 58956143 58956199 -194300384 - Charlie8 DNA MER1_type -1000 1417 1368 204 242 44 66 chr2 58956404 58956495 -194300088 + L2 LINE L2 3184 3272 0 186 283 19 19 chr2 58958286 58958339 -194298244 + MIR SINE MIR 35 87 -175 2374 73 0 13 chr2 58958572 58958875 -194297708 - AluY SINE Alu -12 299 1 488 285 7 7 chr2 58959056 58959200 -194297383 + MIR SINE MIR 117 260 -2 323 317 48 26 chr2 58960369 58960596 -194295987 - L2 LINE L2 -817 2497 2266 21 0 0 0 chr2 58960956 58960977 -194295606 + AT_rich Low_complexity Low_complexity 1 21 0 185 250 21 0 chr2 58961557 58961605 -194294978 - MIR SINE MIR -111 151 103 638 289 73 12 chr2 58961857 58962103 -194294480 + MIR SINE MIR 1 261 -1 406 229 100 73 chr2 58962501 58962790 -194293793 + Charlie8 DNA MER1_type 29 1413 -1004 390 296 246 23 chr2 58962916 58963356 -194293227 + Tigger8 DNA MER2_type 119 656 -10 308 227 216 67 chr2 58963591 58963661 -194292922 + MIR SINE MIR 40 98 -164 2127 132 0 0 chr2 58963661 58963956 -194292627 - AluSx SINE Alu -17 295 1 308 227 216 67 chr2 58963956 58964079 -194292504 + MIR SINE MIR 98 262 0 930 179 107 39 chr2 58965109 58965343 -194291240 + L1MD2 LINE L1 5900 6149 -210 1413 136 18 0 chr2 58965972 58966192 -194290391 - AluSp SINE Alu -8 305 82 26 88 0 0 chr2 58966653 58966721 -194289862 + AT_rich Low_complexity Low_complexity 1 68 0 1948 141 3 3 chr2 58966757 58967047 -194289536 - AluSx SINE Alu -22 290 1 26 0 0 0 chr2 58967049 58967075 -194289508 + AT_rich Low_complexity Low_complexity 1 26 0 2462 58 6 10 chr2 58967271 58967583 -194289000 - AluY SINE Alu 0 311 1 23 33 0 0 chr2 58967684 58967714 -194288869 + AT_rich Low_complexity Low_complexity 1 30 0 26 50 0 0 chr2 58967893 58967933 -194288650 + AT_rich Low_complexity Low_complexity 1 40 0 450 216 97 37 chr2 58967946 58968080 -194288503 - MER58B DNA MER1_type -5 336 195 768 183 43 124 chr2 58969267 58969524 -194287059 + MER106A DNA MER1_type 1 236 0 270 299 56 56 chr2 58970653 58970867 -194285716 - L2 LINE L2 -167 3105 2892 189 0 0 0 chr2 58970913 58970934 -194285649 + (T)n Simple_repeat Simple_repeat 1 21 0 226 207 69 17 chr2 58971608 58971666 -194284917 - MIR3 SINE MIR -3 205 145 789 302 30 13 chr2 58971678 58971913 -194284670 + MIR SINE MIR 2 240 -22 511 268 28 21 chr2 58971930 58972072 -194284511 - MIR3 SINE MIR -50 158 16 1152 133 0 12 chr2 58972496 58972662 -194283921 + AluJo SINE Alu 11 174 -138 387 107 0 0 chr2 58973346 58973402 -194283181 + MADE1 DNA Mariner 25 80 0 235 198 49 12 chr2 58974418 58974499 -194282084 + (TA)n Simple_repeat Simple_repeat 1 84 0 21 0 0 0 chr2 58975642 58975663 -194280920 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr2 58976740 58976771 -194279812 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr2 58979326 58979355 -194277228 + AT_rich Low_complexity Low_complexity 1 29 0 201 196 0 0 chr2 58980052 58980103 -194276480 + CT-rich Low_complexity Low_complexity 2 52 0 186 71 0 0 chr2 58980252 58980280 -194276303 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 2314 77 3 13 chr2 58981183 58981483 -194275100 - AluY SINE Alu -14 297 1 702 120 0 0 chr2 58981483 58981575 -194275008 - AluSc SINE Alu -176 133 42 378 293 0 9 chr2 58982881 58982987 -194273596 - MIR SINE MIR -108 154 50 388 315 116 23 chr2 58985083 58985299 -194271284 + MARNA DNA Mariner 15 250 -336 14817 133 35 23 chr2 58985761 58988150 -194268433 - Tigger1 DNA MER2_type 0 2418 1 264 51 103 0 chr2 58988213 58988252 -194268331 - L1MA1 LINE L1 -353 5949 5907 * 5686 163 27 5 chr2 58988249 58990138 -194266445 - L1MA5 LINE L1 -13 6287 4371 7023 59 84 0 chr2 58990138 58991233 -194265350 - L1PA7 LINE L1 -2 6152 5028 1553 86 5 5 chr2 58991333 58991543 -194265040 - L1PA14 LINE L1 -336 5825 5616 388 319 7 29 chr2 58991651 58991789 -194264794 + MER5A DNA MER1_type 55 189 0 251 276 155 52 chr2 58992234 58992408 -194264175 - MER117 DNA MER1_type 0 197 6 277 316 51 26 chr2 58992415 58992532 -194264051 + MIR SINE MIR 14 133 -129 196 242 95 32 chr2 58992550 58992645 -194263938 - MIR SINE MIR 0 262 162 543 275 19 12 chr2 58992732 58992892 -194263691 - MIR SINE MIR -4 258 98 898 188 44 22 chr2 58992912 58993093 -194263490 + MER5A DNA MER1_type 1 185 -4 273 271 38 95 chr2 58993579 58993789 -194262794 - MIR SINE MIR -31 231 34 2395 43 35 0 chr2 58994629 58994911 -194261672 - AluY SINE Alu -19 292 1 221 274 173 48 chr2 58995124 58995292 -194261291 + MER5A DNA MER1_type 1 189 0 312 286 127 8 chr2 58995636 58995762 -194260821 - MIR3 SINE MIR -38 170 30 397 316 26 0 chr2 58995841 58995993 -194260590 + MER103 DNA DNA 1 156 -10 2478 67 0 0 chr2 58996013 58996313 -194260270 - AluY SINE Alu -11 300 1 537 248 181 9 chr2 58997459 58997669 -194258914 + MIR SINE MIR 17 262 0 229 196 238 49 chr2 58997681 58997824 -194258759 - L1ME4a LINE L1 -92 6029 5860 449 319 52 26 chr2 58997851 58998083 -194258500 + MIR SINE MIR 19 256 -6 1766 95 0 4 chr2 58998342 58998573 -194258010 - AluSx SINE Alu -78 234 5 1203 202 86 10 chr2 58998814 58999080 -194257503 - MLT1A1 LTR MaLR 0 365 76 3260 111 18 7 chr2 58999080 58999522 -194257061 - MER83 LTR ERV1 0 448 2 1203 202 86 10 chr2 58999522 58999565 -194257018 - MLT1A1 LTR MaLR -289 76 38 659 262 65 96 chr2 58999565 58999920 -194256663 - L1ME4a LINE L1 -741 5439 5492 2586 74 0 0 chr2 58999920 59000231 -194256352 - AluY SINE Alu 0 311 1 659 262 65 96 chr2 59000231 59000461 -194256122 - L1ME4a LINE L1 -687 5493 5257 326 159 3 14 chr2 59000600 59000668 -194255915 + MLT1A1 LTR MaLR 1 52 -313 1288 300 84 21 chr2 59001097 59001574 -194255009 + MLT1K LTR MaLR 66 572 -16 2117 155 0 0 chr2 59003789 59004099 -194252484 - AluSx SINE Alu -2 310 1 2320 96 0 3 chr2 59004099 59004401 -194252182 - AluSq SINE Alu -11 302 1 61 15 0 0 chr2 59004404 59004472 -194252111 + AT_rich Low_complexity Low_complexity 1 68 0 484 195 0 0 chr2 59004781 59004863 -194251720 - MER81 DNA DNA -32 82 1 488 250 47 0 chr2 59005222 59005350 -194251233 + MIR SINE MIR 121 254 -8 249 239 30 0 chr2 59005690 59005757 -194250826 - MLT1K LTR MaLR -36 552 484 39 88 0 0 chr2 59007132 59007234 -194249349 + AT_rich Low_complexity Low_complexity 1 102 0 373 270 48 8 chr2 59007621 59007747 -194248836 - MIR3 SINE MIR -6 202 72 2270 94 0 3 chr2 59008054 59008353 -194248230 - AluY SINE Alu -13 298 1 2339 137 17 103 chr2 59008588 59009054 -194247529 + MSTB LTR MaLR 1 426 0 243 298 82 53 chr2 59009511 59009682 -194246901 - MIR SINE MIR -56 206 31 206 259 69 0 chr2 59010050 59010108 -194246475 - L2 LINE L2 0 3272 3211 444 151 14 0 chr2 59010365 59010438 -194246145 - MER116 DNA Mariner -6 74 1 532 226 76 82 chr2 59010465 59010793 -194245790 - HAL1 LINE L1 -45 2462 2137 829 158 29 14 chr2 59011149 59011288 -194245295 - MLT1A1 LTR MaLR -52 313 173 465 231 27 34 chr2 59011624 59011882 -194244701 - HAL1 LINE L1 -613 1894 1541 610 207 119 91 chr2 59011898 59012183 -194244400 - HAL1 LINE L1 -1087 1420 1128 * 43622 49 4 1 chr2 59012181 59018307 -194238276 - L1PA4 LINE L1 0 6155 9 193 29 59 0 chr2 59018483 59018517 -194238066 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 701 274 61 69 chr2 59018584 59018945 -194237638 - HAL1 LINE L1 -2127 380 23 4314 183 70 25 chr2 59018992 59019352 -194237231 - L1MB8 LINE L1 0 6178 5835 1462 169 61 30 chr2 59019352 59019648 -194236935 - AluJo SINE Alu -2 310 6 4314 183 70 25 chr2 59019648 59020278 -194236305 - L1MB8 LINE L1 -343 5835 5103 857 194 81 28 chr2 59020273 59020521 -194236062 - L1MB8 LINE L1 -2499 3647 3387 * 501 226 65 80 chr2 59020713 59020912 -194235671 + MIR SINE MIR 18 213 -49 264 292 18 44 chr2 59020956 59021069 -194235514 + L2 LINE L2 3197 3306 -7 197 299 19 37 chr2 59021168 59021275 -194235308 + L3 LINE CR1 623 727 -850 300 303 154 6 chr2 59021315 59021490 -194235093 + L3 LINE CR1 826 1026 -551 1496 111 65 0 chr2 59021945 59022161 -194234422 - MER30 DNA MER1_type 0 230 1 197 222 141 40 chr2 59022616 59022715 -194233868 - L2 LINE L2 -2 3311 3203 399 297 44 39 chr2 59022843 59023072 -194233511 - L2 LINE L2 -210 3062 2833 1131 222 9 5 chr2 59023276 59023497 -194233086 - MER58A DNA MER1_type 0 224 3 242 153 181 14 chr2 59025062 59025134 -194231449 + MLT1K LTR MaLR 479 562 -26 191 226 94 0 chr2 59025854 59025907 -194230676 + L3 LINE CR1 1518 1575 -2 21 0 0 0 chr2 59025951 59025972 -194230611 + AT_rich Low_complexity Low_complexity 1 21 0 540 137 107 61 chr2 59026104 59026235 -194230348 + MER3 DNA MER1_type 73 209 0 1599 262 36 15 chr2 59026686 59027098 -194229485 - LTR16C LTR ERVL 0 491 71 589 260 61 108 chr2 59029108 59029469 -194227114 - MLT1I LTR MaLR 0 409 66 352 287 87 27 chr2 59029993 59030143 -194226440 - MIR SINE MIR -57 205 47 201 231 0 39 chr2 59031768 59031785 -194224798 + GA-rich Low_complexity Low_complexity 2 18 -33 2289 111 0 9 chr2 59031785 59032100 -194224483 + AluSx SINE Alu 1 312 0 201 231 0 39 chr2 59032100 59032134 -194224449 + GA-rich Low_complexity Low_complexity 18 51 0 22 70 0 0 chr2 59032422 59032465 -194224118 + AT_rich Low_complexity Low_complexity 1 43 0 1600 202 24 48 chr2 59033048 59033425 -194223158 - MLT1A2 LTR MaLR -4 370 3 8766 106 27 9 chr2 59033650 59034862 -194221721 + HUERS-P3b LTR ERV1 6177 7410 -8 3441 100 35 63 chr2 59034864 59035433 -194221150 + LTR9B LTR ERV1 1 553 -91 216 0 0 0 chr2 59035433 59035457 -194221126 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1825 171 3 3 chr2 59035465 59035757 -194220826 + AluJb SINE Alu 1 292 -20 35 0 0 0 chr2 59036289 59036324 -194220259 + AT_rich Low_complexity Low_complexity 1 35 0 733 170 0 0 chr2 59036710 59036822 -194219761 + AluJo SINE Alu 6 117 -195 15731 32 5 0 chr2 59036835 59039452 -194217131 - L1PA4 LINE L1 -2 6153 3526 889 205 10 19 chr2 59039452 59039657 -194216926 + AluJo SINE Alu 102 304 -8 467 298 87 17 chr2 59040026 59040325 -194216258 - L1MC/D LINE L1 -2058 5750 5431 2085 117 3 32 chr2 59040418 59040726 -194215857 - AluSx SINE Alu -10 302 4 1926 88 23 4 chr2 59041051 59041314 -194215269 + L1PA6 LINE L1 5882 6149 -5 470 182 13 0 chr2 59041331 59041408 -194215175 + MER30 DNA MER1_type 153 230 0 398 325 40 35 chr2 59041512 59041712 -194214871 + MLT1I LTR MaLR 39 239 -170 1879 269 64 34 chr2 59041823 59042582 -194214001 - L2 LINE L2 -229 3084 2299 492 272 92 29 chr2 59043956 59044061 -194212522 + MER91A DNA MER1_type 1 123 -73 1591 213 108 72 chr2 59044061 59044563 -194212020 + MLT2B1 LTR ERVL 1 520 0 492 272 92 29 chr2 59044563 59044630 -194211953 + MER91A DNA MER1_type 123 184 -12 430 262 168 0 chr2 59046329 59046478 -194210105 - MER5A DNA MER1_type 0 189 16 240 271 153 26 chr2 59047279 59047508 -194209075 - L2 LINE L2 -68 3245 2988 198 0 0 0 chr2 59047698 59047720 -194208863 + (TTA)n Simple_repeat Simple_repeat 3 24 0 7904 15 0 0 chr2 59047720 59049184 -194207399 - L1PA3 LINE L1 -18 6137 4673 9260 25 0 1 chr2 59049184 59050257 -194206326 + L1PA3 LINE L1 3596 4667 -1479 233 186 68 34 chr2 59050491 59050550 -194206033 + MIR SINE MIR 113 173 -89 1078 258 44 59 chr2 59051442 59051919 -194204664 - MLT1D LTR MaLR -35 470 1 1526 145 76 0 chr2 59051963 59052252 -194204331 + MER33 DNA MER1_type 1 311 -13 517 216 182 7 chr2 59052279 59052427 -194204156 + MER5B DNA MER1_type 1 174 -4 211 163 47 0 chr2 59053429 59053472 -194203111 + CT-rich Low_complexity Low_complexity 4 48 0 1185 202 34 69 chr2 59053552 59053978 -194202605 - MLT1A1 LTR MaLR 0 365 1 183 156 0 0 chr2 59054036 59054068 -194202515 + CT-rich Low_complexity Low_complexity 4 35 0 269 251 170 82 chr2 59055004 59055188 -194201395 - MLT1H LTR MaLR -8 582 387 2416 80 3 0 chr2 59055407 59055708 -194200875 - AluY SINE Alu -9 302 1 708 277 81 61 chr2 59056026 59056133 -194200450 + MLT1J LTR MaLR 91 194 -317 2190 121 3 0 chr2 59056133 59056431 -194200152 - AluSx SINE Alu -13 299 1 708 277 81 61 chr2 59056431 59056717 -194199866 + MLT1J LTR MaLR 194 492 -19 1867 178 15 43 chr2 59057360 59057827 -194198756 - MER67D LTR ERV1 0 514 1 22 56 0 0 chr2 59059438 59059474 -194197109 + GC_rich Low_complexity Low_complexity 1 36 0 192 40 0 0 chr2 59059676 59059701 -194196882 + (CGG)n Simple_repeat Simple_repeat 3 27 0 23 54 0 0 chr2 59059715 59059752 -194196831 + GC_rich Low_complexity Low_complexity 1 37 0 198 328 101 0 chr2 59061334 59061453 -194195130 + MIR SINE MIR 49 179 -83 241 211 111 0 chr2 59062560 59062650 -194193933 + MIR SINE MIR 90 189 -73 218 264 69 14 chr2 59062655 59062727 -194193856 - MIR SINE MIR -126 136 61 201 274 77 86 chr2 59063854 59063971 -194192612 - L2 LINE L2 -6 3266 3151 2004 141 14 0 chr2 59064328 59064619 -194191964 - AluSx SINE Alu -15 297 3 827 144 188 17 chr2 59064635 59064816 -194191767 - L1PA16 LINE L1 -1 6165 5954 482 283 127 59 chr2 59065742 59066431 -194190152 + L2 LINE L2 2554 3300 -13 186 364 73 0 chr2 59066461 59066571 -194190012 - L2 LINE L2 -481 2833 2716 189 307 83 28 chr2 59066575 59066829 -194189754 - L2 LINE L2 -777 2537 2270 224 321 69 23 chr2 59067067 59067198 -194189385 + MIR SINE MIR 75 211 -51 790 207 69 60 chr2 59072230 59072447 -194184136 - MER20 DNA MER1_type 0 219 1 496 229 50 56 chr2 59072455 59072634 -194183949 - MER5B DNA MER1_type 0 178 1 2130 131 0 0 chr2 59074891 59075197 -194181386 - AluSc SINE Alu -3 306 1 25 0 0 0 chr2 59075965 59075990 -194180593 + AT_rich Low_complexity Low_complexity 1 25 0 495 48 0 0 chr2 59076107 59076169 -194180414 + (CA)n Simple_repeat Simple_repeat 1 62 0 356 285 64 52 chr2 59076851 59077023 -194179560 - MIR3 SINE MIR -2 206 33 244 347 32 0 chr2 59078995 59079090 -194177493 + MIR3 SINE MIR 62 159 -49 186 175 50 0 chr2 59080766 59080806 -194175777 - L2 LINE L2 0 3313 3272 2351 168 15 10 chr2 59081387 59081781 -194174802 - MSTD LTR MaLR 0 396 1 201 182 0 0 chr2 59084447 59084480 -194172103 + T-rich Low_complexity Low_complexity 1 33 0 180 125 0 0 chr2 59084787 59084819 -194171764 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 364 336 15 0 chr2 59085297 59085431 -194171152 + Charlie8 DNA MER1_type 92 227 -2190 2033 243 63 23 chr2 59085437 59085996 -194170587 - MLT1G LTR MaLR 0 590 10 214 371 136 8 chr2 59087278 59087410 -194169173 + L2 LINE L2 3117 3265 -7 229 294 52 72 chr2 59087787 59087940 -194168643 + MIR SINE MIR 7 156 -106 977 213 32 44 chr2 59089147 59089396 -194167187 + MIR SINE MIR 3 248 -14 3641 218 39 60 chr2 59089529 59090696 -194165887 - L1M4 LINE L1 -1130 5016 3875 1590 212 21 12 chr2 59090813 59091148 -194165435 + MER58B DNA MER1_type 4 341 0 543 272 25 74 chr2 59091191 59091519 -194165064 - L1ME LINE L1 -434 5728 5401 267 284 12 25 chr2 59091640 59091802 -194164781 + T-rich Low_complexity Low_complexity 6 165 0 23 0 0 0 chr2 59093345 59093368 -194163215 + AT_rich Low_complexity Low_complexity 1 23 0 311 273 155 10 chr2 59093386 59093580 -194163003 - L1ME4a LINE L1 -19 6102 5881 330 295 61 56 chr2 59093600 59093829 -194162754 - L1MC4a LINE L1 -111 7777 7501 199 349 64 64 chr2 59094224 59094333 -194162250 - L2 LINE L2 -26 3246 3138 336 313 90 84 chr2 59094810 59095155 -194161428 - L2 LINE L2 -1 3271 2925 1358 218 133 11 chr2 59096840 59097193 -194159390 - MSTD LTR MaLR 0 396 1 259 135 154 0 chr2 59097337 59097389 -194159194 - L1MA9 LINE L1 -22 6290 6231 1103 301 90 25 chr2 59097750 59098271 -194158312 + MARNA DNA Mariner 10 564 -22 980 230 38 14 chr2 59098275 59098488 -194158095 - MER58A DNA MER1_type -1 223 6 3964 180 70 22 chr2 59098975 59100221 -194156362 - L1MB8 LINE L1 -4 6174 4835 1708 118 0 12 chr2 59100221 59100466 -194156117 + AluSg SINE Alu 49 290 -20 3964 180 70 22 chr2 59100466 59100809 -194155774 - L1MB8 LINE L1 -1343 4835 4510 590 321 100 31 chr2 59100827 59101148 -194155435 - L3 LINE CR1 -226 1351 1009 406 297 94 8 chr2 59101161 59101289 -194155294 + MIR SINE MIR 14 152 -110 473 231 0 46 chr2 59101321 59101429 -194155154 + L2 LINE L2 3168 3270 -2 192 286 0 0 chr2 59101463 59101505 -194155078 + MIR SINE MIR 204 245 -17 732 240 97 42 chr2 59103156 59103255 -194153328 + MIR SINE MIR 34 126 -136 885 45 0 0 chr2 59103255 59103365 -194153218 + L1PA4 LINE L1 6038 6147 -8 732 240 97 42 chr2 59103365 59103482 -194153101 + MIR SINE MIR 126 262 0 2329 94 0 3 chr2 59103554 59103863 -194152720 - AluY SINE Alu -3 308 1 200 291 0 0 chr2 59104566 59104621 -194151962 + A-rich Low_complexity Low_complexity 4 58 0 355 266 152 41 chr2 59105591 59105835 -194150748 + L2 LINE L2 2962 3232 -81 1076 309 191 21 chr2 59106801 59107409 -194149174 + L2 LINE L2 1785 2543 -771 1714 132 100 26 chr2 59107409 59107758 -194148825 + THE1C LTR MaLR 1 375 0 1076 309 191 21 chr2 59107758 59107893 -194148690 + L2 LINE L2 2543 2654 -660 347 340 37 27 chr2 59107996 59108184 -194148399 + L2 LINE L2 2854 3043 -270 187 310 130 20 chr2 59108255 59108355 -194148228 - MIR SINE MIR -126 136 26 656 230 42 17 chr2 59108460 59108731 -194147852 - MER58B DNA MER1_type -32 309 1 192 321 0 0 chr2 59109384 59109440 -194147143 + L2 LINE L2 3209 3264 -8 651 111 0 30 chr2 59110262 59110361 -194146222 - 5S rRNA rRNA -25 96 1 23 0 0 0 chr2 59110825 59110848 -194145735 + AT_rich Low_complexity Low_complexity 1 23 0 182 337 76 0 chr2 59111170 59111262 -194145321 + MIR SINE MIR 144 242 -20 610 283 53 35 chr2 59112531 59112757 -194143826 - MIR SINE MIR -30 232 3 23 0 0 0 chr2 59112767 59112790 -194143793 + AT_rich Low_complexity Low_complexity 1 23 0 309 306 58 50 chr2 59112900 59113142 -194143441 - MIR SINE MIR -17 245 2 2162 113 0 3 chr2 59113170 59113463 -194143120 + AluSx SINE Alu 7 298 -14 23 78 0 0 chr2 59113479 59113530 -194143053 + AT_rich Low_complexity Low_complexity 1 51 0 1026 177 40 5 chr2 59115045 59115243 -194141340 - L1MB7 LINE L1 -19 6165 5961 1753 136 14 89 chr2 59115251 59115612 -194140971 + MER51A LTR ERV1 301 634 0 2608 159 111 30 chr2 59115612 59116215 -194140368 - L1MB7 LINE L1 -220 5964 5313 * 6517 133 18 20 chr2 59116206 59117277 -194139306 - L1MA3 LINE L1 0 7724 6656 2544 136 21 26 chr2 59117277 59117704 -194138879 - MSTB LTR MaLR 0 426 2 6517 133 18 20 chr2 59117704 59118069 -194138514 - L1MA3 LINE L1 -1068 6656 6292 * 16032 151 51 1 chr2 59118046 59120672 -194135911 - L1MA3 LINE L1 -4797 2768 12 2053 201 43 35 chr2 59120675 59120697 -194135886 - L1MB7 LINE L1 -818 5328 5308 1078 176 179 35 chr2 59120697 59121016 -194135567 + MLT1A1 LTR MaLR 1 365 0 1741 99 9 4 chr2 59121022 59121254 -194135329 - AluSx SINE Alu -79 233 1 2053 201 43 35 chr2 59121254 59121762 -194134821 - L1MB7 LINE L1 -842 5304 4787 350 340 121 14 chr2 59123738 59123953 -194132630 - MIR SINE MIR -14 248 11 317 319 56 38 chr2 59124027 59124240 -194132343 - LTR33 LTR ERVL -254 267 51 * 562 256 134 18 chr2 59124212 59124489 -194132094 - LTR33 LTR ERVL -192 329 21 290 236 0 0 chr2 59126297 59126352 -194130231 + L2 LINE L2 3218 3272 0 454 18 0 0 chr2 59126935 59126992 -194129591 - L1PA4 LINE L1 -3 6152 6096 2070 122 7 3 chr2 59127082 59127376 -194129207 - AluSg SINE Alu -15 295 1 2693 44 0 15 chr2 59127570 59127910 -194128673 - L1PA7 LINE L1 0 6154 5820 952 93 0 16 chr2 59127936 59128090 -194128493 + AluSg/x SINE Alu 170 312 0 570 236 26 26 chr2 59128091 59128282 -194128301 - L1ME3A LINE L1 -26 6144 5954 666 322 119 8 chr2 59128319 59128873 -194127710 - L2 LINE L2 -223 3049 2403 246 233 0 0 chr2 59129074 59129134 -194127449 + (CATATA)n Simple_repeat Simple_repeat 4 63 0 406 283 141 48 chr2 59129566 59129835 -194126748 - L2 LINE L2 -6 3307 3014 586 268 45 19 chr2 59129920 59130244 -194126339 - MLT1I LTR MaLR -15 394 64 213 292 84 65 chr2 59130446 59130779 -194125804 - L2 LINE L2 -1133 2181 1839 188 35 35 0 chr2 59130779 59130808 -194125775 + (TTG)n Simple_repeat Simple_repeat 2 31 0 213 292 84 65 chr2 59130808 59130857 -194125726 - L2 LINE L2 -1475 1839 1792 249 299 55 73 chr2 59132670 59132834 -194123749 - L2 LINE L2 -575 2739 2579 321 363 103 16 chr2 59133703 59134083 -194122500 - L2 LINE L2 -1678 1636 1224 331 301 60 6 chr2 59136057 59136215 -194120368 + MIR SINE MIR 8 171 -62 189 300 146 55 chr2 59136574 59136684 -194119899 - L2 LINE L2 -5 3267 3148 204 40 0 0 chr2 59137020 59137045 -194119538 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 2546 273 54 44 chr2 59138809 59138933 -194117650 + L2 LINE L2 2067 2188 -1125 1565 120 22 0 chr2 59138933 59139158 -194117425 + MER30 DNA MER1_type 1 230 0 2546 273 54 44 chr2 59139158 59140117 -194116466 + L2 LINE L2 2188 3147 -166 440 188 0 9 chr2 59140381 59140493 -194116090 + L1MA7 LINE L1 5257 5367 -924 * 4955 149 22 35 chr2 59140469 59141323 -194115260 + L1MA7 LINE L1 5286 6125 -166 738 193 0 0 chr2 59141323 59141442 -194115141 + FLAM_A SINE Alu 5 123 -10 4955 149 22 35 chr2 59141442 59141605 -194114978 + L1MA7 LINE L1 6125 6289 -2 969 182 199 35 chr2 59143275 59143346 -194113237 - MER69 DNA AcHobo 0 2526 2468 2192 100 19 13 chr2 59143346 59143655 -194112928 + AluY SINE Alu 1 311 0 969 182 199 35 chr2 59143655 59144011 -194112572 - MER69 DNA AcHobo -58 2468 2029 1627 250 89 13 chr2 59144034 59144365 -194112218 - MER69 DNA AcHobo -658 568 181 252 0 0 0 chr2 59144365 59144393 -194112190 + (TG)n Simple_repeat Simple_repeat 2 29 0 1627 250 89 13 chr2 59144393 59144589 -194111994 - MER69 DNA AcHobo -1045 181 1 677 269 39 14 chr2 59145937 59146145 -194110438 - MIR SINE MIR -17 245 33 494 325 58 105 chr2 59147137 59147688 -194108895 + HAL1 LINE L1 38 562 -1945 1173 280 153 25 chr2 59147870 59148718 -194107865 + HAL1 LINE L1 808 1841 -666 198 0 0 0 chr2 59148718 59148740 -194107843 + (TA)n Simple_repeat Simple_repeat 2 23 0 1173 280 153 25 chr2 59148740 59149038 -194107545 + HAL1 LINE L1 1841 2100 -407 225 150 0 0 chr2 59149266 59149306 -194107277 - MLT2C1 LTR ERVL -8 389 350 2172 176 44 7 chr2 59149337 59149746 -194106837 - MLT2C2 LTR ERVL -40 424 1 1324 210 3 85 chr2 59149765 59150141 -194106442 - MLT1A2 LTR MaLR 0 374 30 2048 149 6 25 chr2 59151400 59151762 -194104821 + THE1A LTR MaLR 1 355 0 486 73 24 0 chr2 59151771 59151853 -194104730 - L1PA13 LINE L1 -3 6160 6077 209 369 54 18 chr2 59152462 59152573 -194104010 - MIR3 SINE MIR -9 199 85 228 333 20 20 chr2 59152678 59152777 -194103806 - L2 LINE L2 0 3272 3174 2180 114 3 0 chr2 59153592 59153898 -194102685 - AluSx SINE Alu 0 312 6 911 151 28 104 chr2 59154288 59154539 -194102044 - L1MB8 LINE L1 -12 6166 5935 * 1672 176 42 48 chr2 59154530 59154963 -194101620 - L1MA6 LINE L1 -211 6089 5660 277 245 28 28 chr2 59155969 59155986 -194100597 - L1MA10 LINE L1 -13 6321 6305 3085 217 97 31 chr2 59155986 59157533 -194099050 - L1ME2 LINE L1 -21 6212 4467 2153 95 0 3 chr2 59157533 59157840 -194098743 - AluSx SINE Alu 0 306 1 3085 217 97 31 chr2 59157840 59158544 -194098039 - L1ME2 LINE L1 -1766 4467 3811 2255 240 124 24 chr2 59158656 59159406 -194097177 - L1ME2 LINE L1 -2702 3513 2840 2267 114 0 0 chr2 59159406 59159703 -194096880 - AluSq SINE Alu -16 297 1 2255 240 124 24 chr2 59159703 59160120 -194096463 - L1ME2 LINE L1 -3375 2840 2259 2148 143 0 6 chr2 59160120 59160434 -194096149 - AluSx SINE Alu 0 312 1 2255 240 124 24 chr2 59160434 59160464 -194096119 - L1ME2 LINE L1 -3956 2259 2233 349 87 43 51 chr2 59160466 59160604 -194095979 + (TTATA)n Simple_repeat Simple_repeat 5 141 0 25 0 0 0 chr2 59160604 59160629 -194095954 + AT_rich Low_complexity Low_complexity 1 25 0 1881 275 72 76 chr2 59160637 59162613 -194093970 - L1ME2 LINE L1 -4393 2003 36 260 316 76 58 chr2 59164389 59164680 -194091903 - L2 LINE L2 -170 3102 2807 454 218 32 77 chr2 59165890 59166046 -194090537 + MER103 DNA DNA 18 166 0 626 322 118 41 chr2 59166309 59166989 -194089594 - L2 LINE L2 -2 3311 2574 2376 85 0 3 chr2 59167108 59167413 -194089170 - AluY SINE Alu -7 304 1 6269 83 36 2 chr2 59168292 59169489 -194087094 + L1PA10 LINE L1 4925 6166 -2 379 301 61 37 chr2 59176369 59176532 -194080051 + MER5A DNA MER1_type 1 167 -22 1802 92 73 0 chr2 59176734 59176995 -194079588 + L1PA8 LINE L1 5888 6167 -5 2247 115 0 3 chr2 59177004 59177317 -194079266 + AluSx SINE Alu 1 312 0 359 345 42 0 chr2 59178370 59178489 -194078094 + L2 LINE L2 3149 3272 0 958 102 0 0 chr2 59179797 59179924 -194076659 + AluSx SINE Alu 1 127 -185 268 43 43 0 chr2 59179928 59179974 -194076609 + (CAAA)n Simple_repeat Simple_repeat 2 49 0 1163 139 17 0 chr2 59179974 59180146 -194076437 + AluSx SINE Alu 121 295 -17 893 191 42 16 chr2 59180315 59180504 -194076079 - MIR SINE MIR -58 204 11 320 274 19 38 chr2 59181021 59181127 -194075456 - L2 LINE L2 -1 3271 3168 2192 111 7 0 chr2 59181169 59181458 -194075125 - AluSq SINE Alu -22 291 1 349 318 48 24 chr2 59181766 59181892 -194074691 - L2 LINE L2 -11 3261 3133 495 306 123 5 chr2 59182603 59182822 -194073761 - MIR SINE MIR -12 250 6 279 333 76 28 chr2 59183492 59183558 -194073025 + MIR SINE MIR 32 93 -169 198 0 0 0 chr2 59183558 59183580 -194073003 + (CAA)n Simple_repeat Simple_repeat 2 23 0 279 333 76 28 chr2 59183580 59183657 -194072926 + MIR SINE MIR 93 182 -80 535 159 0 79 chr2 59186488 59186614 -194069969 - L1PA11 LINE L1 -2 6172 6057 428 306 53 12 chr2 59186660 59186830 -194069753 - MIR SINE MIR -3 259 83 257 254 34 0 chr2 59186937 59186996 -194069587 + MER5A DNA MER1_type 123 183 -6 216 204 23 0 chr2 59188390 59188434 -194068149 + L2 LINE L2 3220 3264 -8 466 281 13 59 chr2 59189301 59189454 -194067129 + MIR3 SINE MIR 16 161 -47 247 236 118 42 chr2 59189509 59189653 -194066930 - MER103 DNA DNA -9 157 3 201 352 0 14 chr2 59190471 59190542 -194066041 - L2 LINE L2 0 3313 3244 200 171 24 24 chr2 59191762 59191803 -194064780 + L2 LINE L2 3229 3269 -3 401 318 59 24 chr2 59193327 59193497 -194063086 + L2 LINE L2 2885 3060 -253 874 242 52 0 chr2 59194184 59194395 -194062188 - MIR SINE MIR -29 233 12 21109 53 0 0 chr2 59194877 59198337 -194058246 + L1PA5 LINE L1 2697 6154 0 25 0 0 0 chr2 59199574 59199599 -194056984 + AT_rich Low_complexity Low_complexity 1 25 0 483 220 65 48 chr2 59201228 59201396 -194055187 + MIR SINE MIR 81 251 -11 189 0 0 0 chr2 59202862 59202883 -194053700 + (A)n Simple_repeat Simple_repeat 1 21 0 722 276 93 9 chr2 59202923 59203148 -194053435 - MIR SINE MIR -10 252 9 939 364 58 36 chr2 59203432 59204260 -194052323 + L2 LINE L2 2131 2976 -338 286 269 193 25 chr2 59204359 59204478 -194052105 + L2 LINE L2 3165 3303 -10 324 0 0 0 chr2 59204976 59205012 -194051571 + (T)n Simple_repeat Simple_repeat 1 36 0 213 182 0 0 chr2 59205531 59205564 -194051019 + polypyrimidine Low_complexity Low_complexity 2 34 0 3058 147 7 21 chr2 59205780 59206444 -194050139 + L1PB4 LINE L1 5520 6165 -3 780 150 0 0 chr2 59206445 59206572 -194050011 + L1PB4 LINE L1 6026 6152 -4 1316 208 145 0 chr2 59207304 59207621 -194048962 - MLT1A1 LTR MaLR -2 363 1 316 213 9 9 chr2 59207635 59207743 -194048840 + CT-rich Low_complexity Low_complexity 2 109 0 1185 265 102 53 chr2 59208025 59208819 -194047764 - L2 LINE L2 -38 3275 2444 714 304 100 26 chr2 59209001 59209350 -194047233 + L2 LINE L2 2929 3303 -10 344 324 19 0 chr2 59209664 59209769 -194046814 - L3 LINE CR1 -103 1474 1368 996 231 88 35 chr2 59210444 59210635 -194045948 - MLT1A1 LTR MaLR 0 365 147 2190 115 0 0 chr2 59210635 59210930 -194045653 - AluSg SINE Alu -15 295 1 996 231 88 35 chr2 59210930 59211080 -194045503 - MLT1A1 LTR MaLR -218 147 6 1930 143 3 3 chr2 59211175 59211484 -194045099 - AluSq SINE Alu 0 309 1 195 221 0 208 chr2 59212066 59212143 -194044440 + MIR3 SINE MIR 112 172 -36 2348 76 0 0 chr2 59212812 59213103 -194043480 - AluSg SINE Alu -9 301 11 183 80 0 0 chr2 59213625 59213650 -194042933 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 21 0 0 0 chr2 59213664 59213685 -194042898 + AT_rich Low_complexity Low_complexity 1 21 0 344 172 16 0 chr2 59214168 59214232 -194042351 + L2 LINE L2 3248 3312 -1 3430 160 50 34 chr2 59215487 59215624 -194040959 - MER50 LTR ERV1 -23 711 578 2480 79 0 0 chr2 59215624 59215929 -194040654 + AluSp SINE Alu 1 305 -8 3430 160 50 34 chr2 59215929 59216491 -194040092 - MER50 LTR ERV1 -156 578 1 330 248 159 34 chr2 59217487 59217717 -194038866 - L1MC/D LINE L1 -743 5403 5180 1024 109 35 11 chr2 59219096 59219270 -194037313 - Tigger7 DNA MER2_type 0 2487 2310 1333 178 112 0 chr2 59219289 59219547 -194037036 - Tigger7 DNA MER2_type -2168 319 33 389 187 122 14 chr2 59220266 59220405 -194036178 - MER104 DNA Tc2 -1 179 26 22 0 0 0 chr2 59221237 59221259 -194035324 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr2 59221969 59221996 -194034587 + AT_rich Low_complexity Low_complexity 1 27 0 266 304 125 18 chr2 59222186 59222354 -194034229 - MIR3 SINE MIR -4 204 19 919 103 0 7 chr2 59225185 59225321 -194031262 - AluSg/x SINE Alu 0 312 178 1352 92 0 0 chr2 59225321 59225485 -194031098 + AluSq SINE Alu 3 166 -147 239 241 0 17 chr2 59225796 59225854 -194030729 - L1ME LINE L1 -322 5799 5743 7796 18 0 0 chr2 59225885 59227087 -194029496 - L1PA3 LINE L1 -3 6152 4950 2053 119 17 0 chr2 59227382 59227675 -194028908 - AluSx SINE Alu -13 299 2 305 407 26 0 chr2 59227798 59227992 -194028591 + MIR3 SINE MIR 3 201 -7 1604 120 54 31 chr2 59231525 59231783 -194024800 + AluSx SINE Alu 44 307 -5 2167 98 0 33 chr2 59231818 59232125 -194024458 + AluY SINE Alu 1 297 -14 907 221 26 49 chr2 59233526 59233752 -194022831 - MER58A DNA MER1_type -3 221 1 2075 101 0 60 chr2 59233802 59234119 -194022464 - AluSq SINE Alu 0 313 16 260 185 0 0 chr2 59235127 59235181 -194021402 + L1MA7 LINE L1 6238 6291 0 2424 67 0 3 chr2 59236002 59236301 -194020282 + AluY SINE Alu 1 298 -13 1171 272 110 106 chr2 59236376 59237612 -194018971 - L2 LINE L2 -16 3297 2061 2013 102 3 84 chr2 59237620 59237953 -194018630 - AluSx SINE Alu -6 306 1 210 387 16 8 chr2 59239660 59239784 -194016799 + L2 LINE L2 2374 2498 -816 5564 145 30 9 chr2 59240662 59241675 -194014908 - L1MA8 LINE L1 -2 6289 5256 1038 169 24 34 chr2 59242532 59242739 -194013844 - MER20 DNA MER1_type 0 219 15 803 291 32 16 chr2 59242839 59243086 -194013497 - MIR SINE MIR -4 258 8 183 273 55 0 chr2 59243356 59243411 -194013172 + L3 LINE CR1 1511 1568 -9 305 159 0 14 chr2 59243821 59243890 -194012693 + (TA)n Simple_repeat Simple_repeat 2 69 0 26 50 0 0 chr2 59245577 59245617 -194010966 + AT_rich Low_complexity Low_complexity 1 40 0 34 0 0 0 chr2 59246528 59246562 -194010021 + AT_rich Low_complexity Low_complexity 1 34 0 1687 180 0 0 chr2 59249557 59249829 -194006754 + AluJo SINE Alu 1 272 -40 21 36 0 0 chr2 59251393 59251421 -194005162 + AT_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr2 59251657 59251689 -194004894 + AT_rich Low_complexity Low_complexity 1 32 0 2067 88 0 4 chr2 59252673 59252934 -194003649 + AluSg SINE Alu 37 296 -14 1017 172 0 0 chr2 59255444 59255601 -194000982 + FRAM SINE Alu 1 157 -9 219 36 0 0 chr2 59255655 59255683 -194000900 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 235 362 48 0 chr2 59256557 59256662 -193999921 - MIR SINE MIR -57 151 42 595 251 80 25 chr2 59258868 59259031 -193997552 + MER5B DNA MER1_type 6 177 -1 21 0 0 0 chr2 59261437 59261458 -193995125 + AT_rich Low_complexity Low_complexity 1 21 0 27 73 0 0 chr2 59261484 59261539 -193995044 + AT_rich Low_complexity Low_complexity 1 55 0 400 205 0 0 chr2 59262568 59262646 -193993937 + MER116 DNA Mariner 1 78 -2 229 280 103 57 chr2 59262751 59262926 -193993657 + MIR SINE MIR 3 185 -77 196 169 68 68 chr2 59263291 59263350 -193993233 + L3b LINE CR1 1294 1352 -231 231 154 0 39 chr2 59263795 59263847 -193992736 + CT-rich Low_complexity Low_complexity 2 51 0 2405 92 8 27 chr2 59263894 59264262 -193992321 - L1PB1 LINE L1 0 6151 5791 612 180 0 25 chr2 59264306 59264428 -193992155 - MER66B LTR ERV1 -294 192 74 738 110 0 9 chr2 59264431 59264540 -193992043 + L1PB2 LINE L1 5777 5884 -267 414 0 0 0 chr2 59264548 59264594 -193991989 + (TA)n Simple_repeat Simple_repeat 2 47 0 1761 166 38 93 chr2 59264594 59265037 -193991546 - MER66B LTR ERV1 -66 420 1 258 220 0 0 chr2 59266145 59266204 -193990379 + (TATATG)n Simple_repeat Simple_repeat 5 63 0 216 271 144 51 chr2 59267394 59267512 -193989071 - L2 LINE L2 -1 3312 3184 505 256 158 5 chr2 59267594 59267809 -193988774 - LTR16A1 LTR ERVL 0 457 210 460 233 47 20 chr2 59268434 59268584 -193987999 - L1M4 LINE L1 -2174 3972 3819 579 238 51 31 chr2 59268684 59268940 -193987643 - L1M4 LINE L1 -3710 2436 2176 9147 216 34 16 chr2 59269000 59271639 -193984944 - L1MC1 LINE L1 -18 6595 4004 2206 137 8 39 chr2 59271639 59272026 -193984557 + THE1C LTR MaLR 1 375 0 9147 216 34 16 chr2 59272026 59272241 -193984342 - L1MC1 LINE L1 -2609 4004 3794 1003 25 0 0 chr2 59272241 59272360 -193984223 + L1PA2 LINE L1 6037 6155 0 9147 216 34 16 chr2 59272360 59273199 -193983384 - L1MC1 LINE L1 -2819 3794 2841 297 193 174 0 chr2 59273202 59273311 -193983272 - L1MC1 LINE L1 -3843 2583 2456 8020 160 99 42 chr2 59273312 59273543 -193983040 - L1MC1 LINE L1 -4031 2395 2179 2033 113 21 12 chr2 59273543 59273871 -193982712 - L1MA2 LINE L1 0 6304 5974 8020 160 99 42 chr2 59273871 59275963 -193980620 - L1MC1 LINE L1 -4247 2179 1 1883 260 36 40 chr2 59276017 59276843 -193979740 + L2 LINE L2 2414 3239 -74 302 298 12 0 chr2 59277319 59277403 -193979180 + L2 LINE L2 3229 3313 0 227 104 62 0 chr2 59277531 59277579 -193979004 + A-rich Low_complexity Low_complexity 1 51 0 25 31 0 0 chr2 59278456 59278488 -193978095 + AT_rich Low_complexity Low_complexity 1 32 0 293 289 191 13 chr2 59279358 59279510 -193977073 + MIR SINE MIR 34 212 -50 2243 154 5 24 chr2 59279525 59279896 -193976687 + THE1B LTR MaLR 1 364 0 27 29 0 0 chr2 59280232 59280266 -193976317 + AT_rich Low_complexity Low_complexity 1 34 0 21 36 0 0 chr2 59280297 59280325 -193976258 + AT_rich Low_complexity Low_complexity 1 28 0 24 54 0 18 chr2 59280651 59280676 -193975907 + AT_rich Low_complexity Low_complexity 1 25 -30 930 18 0 0 chr2 59280676 59280785 -193975798 + L1PA4 LINE L1 6044 6152 -3 24 54 0 18 chr2 59280785 59280815 -193975768 + AT_rich Low_complexity Low_complexity 25 55 0 23 0 0 0 chr2 59280937 59280960 -193975623 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr2 59282781 59282802 -193973781 + (TG)n Simple_repeat Simple_repeat 2 22 0 357 331 129 6 chr2 59282872 59283035 -193973548 - MER5A DNA MER1_type 0 189 7 210 37 0 0 chr2 59283123 59283150 -193973433 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 235 333 12 0 chr2 59283410 59283491 -193973092 + MIR3 SINE MIR 115 196 -12 543 330 24 5 chr2 59283821 59284030 -193972553 + MIR SINE MIR 1 213 -49 588 274 34 23 chr2 59284109 59284284 -193972299 + MER5B DNA MER1_type 2 178 0 6782 139 46 18 chr2 59285031 59286228 -193970355 - Tigger3b DNA MER2_type 0 1231 1 2062 167 46 23 chr2 59286767 59287198 -193969385 + L1PB4 LINE L1 5713 6153 -3 265 271 168 64 chr2 59287211 59287414 -193969169 + MLT1K LTR MaLR 335 558 -30 867 198 86 0 chr2 59288164 59288361 -193968222 + MER20 DNA MER1_type 2 215 -4 213 300 0 0 chr2 59288765 59288835 -193967748 + (TA)n Simple_repeat Simple_repeat 2 71 0 7046 196 52 29 chr2 59289006 59289809 -193966774 - L1MB7 LINE L1 -19 6401 5617 1805 140 35 0 chr2 59289809 59290094 -193966489 - AluSx SINE Alu -17 295 1 7046 196 52 29 chr2 59290094 59290472 -193966111 - L1MB7 LINE L1 -803 5617 5249 279 0 0 0 chr2 59290472 59290503 -193966080 + (TG)n Simple_repeat Simple_repeat 2 32 0 7046 196 52 29 chr2 59290503 59292071 -193964512 - L1MB7 LINE L1 -1171 5249 3578 824 240 134 70 chr2 59292044 59292498 -193964085 - L1MB7 LINE L1 -4774 1610 1128 * 486 248 79 40 chr2 59292945 59293611 -193962972 + L1MC5 LINE L1 7027 7547 -414 776 299 69 57 chr2 59293691 59294194 -193962389 - MLT1H LTR MaLR -8 541 1 5166 124 41 42 chr2 59294803 59295633 -193960950 - L1PA16 LINE L1 -1 6165 5332 2024 138 3 6 chr2 59295633 59295945 -193960638 - AluSx SINE Alu -1 311 1 5166 124 41 42 chr2 59295945 59296045 -193960538 - L1PA16 LINE L1 -834 5332 5233 39990 70 6 6 chr2 59296088 59302256 -193954327 + L1PA4 LINE L1 3 6173 0 318 336 104 0 chr2 59302433 59302567 -193954016 - MIR SINE MIR -23 239 92 245 344 92 15 chr2 59303386 59303517 -193953066 - MIR3 SINE MIR -66 142 2 2067 131 3 16 chr2 59303532 59303846 -193952737 - AluSp SINE Alu -3 310 1 233 279 213 0 chr2 59304410 59304546 -193952037 + MIR SINE MIR 68 232 -30 234 390 0 0 chr2 59304880 59304962 -193951621 - L2 LINE L2 -2 3270 3189 1175 251 258 16 chr2 59304964 59305399 -193951184 + MLT1H LTR MaLR 7 546 -3 487 300 62 31 chr2 59306328 59306555 -193950028 - MIR SINE MIR -23 239 6 339 342 94 7 chr2 59306552 59306701 -193949882 + L2 LINE L2 2720 2881 -433 * 311 307 71 0 chr2 59306935 59307062 -193949521 - MIR SINE MIR -74 188 53 11091 157 16 20 chr2 59307149 59309598 -193946985 - L1MA3 LINE L1 -5 7719 5263 2237 121 0 6 chr2 59309598 59309912 -193946671 - AluSq SINE Alu 0 313 2 11091 157 16 20 chr2 59309912 59310328 -193946255 - L1MA3 LINE L1 -2461 5263 4865 2384 93 0 3 chr2 59310328 59310639 -193945944 - AluY SINE Alu -1 310 1 11091 157 16 20 chr2 59310639 59311056 -193945527 - L1MA3 LINE L1 -2859 4865 4448 7762 20 1 0 chr2 59311057 59311957 -193944626 - L1PA2 LINE L1 -1 6154 5254 18236 154 65 52 chr2 59311958 59314011 -193942572 - L1MA3 LINE L1 -3108 4457 2432 2035 157 120 5 chr2 59314011 59314394 -193942189 - MSTA LTR MaLR -1 427 1 18236 154 65 52 chr2 59314394 59316723 -193939860 - L1MA3 LINE L1 -5133 2432 12 1690 167 54 10 chr2 59316817 59317111 -193939472 - AluJb SINE Alu -2 310 4 2739 178 27 0 chr2 59317382 59317909 -193938674 - L1MA5 LINE L1 0 6300 5760 381 153 0 0 chr2 59317910 59317969 -193938614 + L1MA5 LINE L1 5711 5769 -531 379 347 30 18 chr2 59317980 59318147 -193938436 - MIR SINE MIR -74 188 20 246 32 0 0 chr2 59318241 59318266 -193938317 + (CA)n Simple_repeat Simple_repeat 1 56 0 246 32 0 0 chr2 59318266 59318297 -193938286 + (CA)n Simple_repeat Simple_repeat 2 32 0 975 179 43 149 chr2 59318484 59318859 -193937724 - MER58B DNA MER1_type -4 337 3 22 0 0 0 chr2 59319053 59319075 -193937508 + AT_rich Low_complexity Low_complexity 1 22 0 305 257 11 126 chr2 59320202 59320377 -193936206 + MIR SINE MIR 94 248 -14 264 100 0 0 chr2 59320382 59320422 -193936161 + (TTA)n Simple_repeat Simple_repeat 1 40 0 29 0 0 0 chr2 59321053 59321082 -193935501 + AT_rich Low_complexity Low_complexity 1 29 0 674 325 83 25 chr2 59321255 59321782 -193934801 - L1ME4a LINE L1 -213 5908 5351 22 35 0 0 chr2 59321888 59321917 -193934666 + AT_rich Low_complexity Low_complexity 1 29 0 2253 236 31 57 chr2 59322876 59323491 -193933092 + MLT1E2 LTR MaLR 18 616 -10 249 330 0 0 chr2 59323599 59323690 -193932893 - MIR SINE MIR -68 140 50 258 81 0 0 chr2 59325119 59325156 -193931427 + (T)n Simple_repeat Simple_repeat 1 37 0 2101 182 76 18 chr2 59325593 59326043 -193930540 + MER67D LTR ERV1 11 486 -28 502 301 77 59 chr2 59326921 59327193 -193929390 + LTR33 LTR ERVL 1 277 -244 226 125 0 0 chr2 59327342 59327374 -193929209 + LTR33 LTR ERVL 490 521 0 1912 139 4 4 chr2 59328196 59328497 -193928086 - AluSx SINE Alu 0 301 1 1001 153 6 0 chr2 59328596 59328789 -193927794 + AluSg/x SINE Alu 117 310 0 195 300 50 12 chr2 59330194 59330274 -193926309 + MIR SINE MIR 111 193 -69 228 67 0 0 chr2 59330606 59330636 -193925947 + (A)n Simple_repeat Simple_repeat 1 30 0 21 0 0 0 chr2 59331461 59331482 -193925101 + AT_rich Low_complexity Low_complexity 1 21 0 190 361 31 21 chr2 59331986 59332083 -193924500 + MIR SINE MIR 8 105 -157 255 324 44 15 chr2 59332576 59332712 -193923871 - MIR SINE MIR -3 259 120 419 35 18 0 chr2 59333173 59333230 -193923353 + (CA)n Simple_repeat Simple_repeat 1 58 0 2039 151 0 0 chr2 59333491 59333783 -193922800 + AluSx SINE Alu 1 292 -20 185 238 79 32 chr2 59334007 59334070 -193922513 + MIR SINE MIR 63 128 -134 337 319 47 30 chr2 59334083 59334252 -193922331 + MIR SINE MIR 20 191 -71 252 297 36 7 chr2 59334269 59334407 -193922176 + (TATATG)n Simple_repeat Simple_repeat 4 145 0 199 50 75 0 chr2 59334933 59334973 -193921610 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 217 299 0 15 chr2 59335051 59335118 -193921465 + CT-rich Low_complexity Low_complexity 1 66 0 369 0 0 0 chr2 59335241 59335282 -193921301 + (CA)n Simple_repeat Simple_repeat 2 42 0 246 363 32 24 chr2 59336670 59336794 -193919789 - MIR SINE MIR -118 144 20 399 125 0 16 chr2 59337260 59337318 -193919265 - MLT1A1 LTR MaLR 0 365 309 1607 149 0 31 chr2 59337318 59337573 -193919010 - MER1B DNA MER1_type 0 339 133 1341 214 40 7 chr2 59337574 59337850 -193918733 - MLT1A1 LTR MaLR -80 285 1 1458 217 25 3 chr2 59337862 59338148 -193918435 - MLT2B1 LTR ERVL -227 293 2 1694 315 14 29 chr2 59338649 59339268 -193917315 + L1PA13 LINE L1 788 1397 -6177 322 333 0 0 chr2 59339373 59339472 -193917111 + L1PA13 LINE L1 2084 2182 -5399 659 314 23 22 chr2 59339729 59340050 -193916533 + L1PA13 LINE L1 2203 2448 -5126 13591 260 28 12 chr2 59340229 59344512 -193912071 + L1PA13 LINE L1 2466 6817 -767 214 293 17 0 chr2 59344953 59345011 -193911572 + GA-rich Low_complexity Low_complexity 3 61 0 889 312 62 109 chr2 59345411 59345852 -193910731 + L2 LINE L2 1932 2392 -921 204 97 0 0 chr2 59345852 59345883 -193910700 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 889 312 62 109 chr2 59345883 59346627 -193909956 + L2 LINE L2 2392 3060 -253 372 183 0 0 chr2 59346796 59346867 -193909716 + L1MA6 LINE L1 6151 6221 -79 731 259 48 0 chr2 59346880 59347046 -193909537 + MER5A DNA MER1_type 16 189 0 398 269 19 0 chr2 59347135 59347239 -193909344 + L2 LINE L2 3194 3299 -14 267 321 143 9 chr2 59347348 59347460 -193909123 + L2 LINE L2 3141 3267 -5 353 326 0 53 chr2 59347476 59347608 -193908975 - L2 LINE L2 0 3313 3189 2260 112 0 0 chr2 59347678 59347981 -193908602 - AluSx SINE Alu -9 303 1 697 300 39 9 chr2 59348313 59348546 -193908037 - MIR SINE MIR -10 252 13 509 236 97 7 chr2 59350799 59350943 -193905640 - L1MB7 LINE L1 -10 6174 6018 * 2145 224 43 16 chr2 59350942 59351548 -193905035 - L1MEc LINE L1 -1262 5695 5074 3950 153 40 6 chr2 59351548 59352223 -193904360 + MER50 LTR ERV1 1 698 -36 6359 238 62 18 chr2 59352243 59354422 -193902161 - L1MEc LINE L1 -1889 5068 2821 1915 219 79 15 chr2 59354422 59354893 -193901690 + MLT1D LTR MaLR 3 503 -2 6359 238 62 18 chr2 59354893 59355138 -193901445 - L1MEc LINE L1 -4136 2821 2588 1158 101 0 0 chr2 59355186 59355334 -193901249 + AluY SINE Alu 11 158 -153 387 228 110 16 chr2 59355334 59355461 -193901122 - L1MEc LINE L1 -5790 1069 931 404 330 73 17 chr2 59356011 59356299 -193900284 - L1MEc LINE L1 -6544 315 12 385 145 60 0 chr2 59356304 59356387 -193900196 - L1M4 LINE L1 -1733 4413 4326 23 33 0 0 chr2 59357741 59357771 -193898812 + AT_rich Low_complexity Low_complexity 1 30 0 2361 142 34 23 chr2 59358151 59358589 -193897994 + MER65A LTR ERV1 3 445 0 268 273 13 0 chr2 59359926 59360003 -193896580 - MLT1K LTR MaLR -110 478 401 580 313 145 0 chr2 59361012 59361226 -193895357 + MIR SINE MIR 18 262 0 23 0 0 0 chr2 59361866 59361889 -193894694 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 59361918 59361946 -193894637 + AT_rich Low_complexity Low_complexity 1 28 0 9865 121 82 17 chr2 59361955 59363608 -193892975 + Tigger1 DNA MER2_type 658 2417 -1 674 240 59 51 chr2 59363655 59363913 -193892670 + MIR SINE MIR 2 262 0 361 243 126 9 chr2 59363956 59364067 -193892516 - L2 LINE L2 0 3313 3190 21 0 0 0 chr2 59364361 59364382 -193892201 + AT_rich Low_complexity Low_complexity 1 21 0 2068 40 0 12 chr2 59365896 59366147 -193890436 - AluY SINE Alu -63 248 1 363 306 115 64 chr2 59367306 59367757 -193888826 + L1 LINE L1 3283 3756 -2390 309 328 93 52 chr2 59368347 59368883 -193887700 + L1 LINE L1 4500 5057 -1089 3146 237 5 4 chr2 59368992 59369798 -193886785 - L1P LINE L1 -2766 3380 2574 4919 170 30 29 chr2 59369799 59370771 -193885812 + L1P LINE L1 3364 4336 -1810 824 104 7 30 chr2 59370768 59370903 -193885680 - L1PA15 LINE L1 -259 5906 5775 * 4073 93 37 2 chr2 59370919 59371510 -193885073 + L1PA14 LINE L1 5550 6161 0 1606 11 0 0 chr2 59371636 59371812 -193884771 + AluYa5 SINE Alu 131 306 -5 5463 151 7 6 chr2 59371975 59372980 -193883603 - L1PA15 LINE L1 -1 6164 5157 7451 195 7 7 chr2 59372990 59374495 -193882088 - L1PA15 LINE L1 -1368 4778 3274 1567 220 55 39 chr2 59374543 59375050 -193881533 - L1P LINE L1 -3640 2506 1990 21 0 0 0 chr2 59375367 59375388 -193881195 + AT_rich Low_complexity Low_complexity 1 21 0 1275 226 37 37 chr2 59375475 59375771 -193880812 - AluJb SINE Alu -10 302 7 21 0 0 0 chr2 59377149 59377170 -193879413 + AT_rich Low_complexity Low_complexity 1 21 0 452 213 0 19 chr2 59377170 59377187 -193879396 - L1MA9 LINE L1 -33 6279 6263 838 183 60 93 chr2 59377187 59377675 -193878908 - L1ME1 LINE L1 -44 6122 5692 501 170 0 43 chr2 59380265 59380359 -193876224 - FLAM_C SINE Alu -19 124 35 348 262 52 2 chr2 59380543 59380640 -193875943 - MIR3 SINE MIR -30 178 77 589 287 46 87 chr2 59381460 59381920 -193874663 - LTR16A1 LTR ERVL 0 457 17 1489 193 18 11 chr2 59382049 59382364 -193874219 + AluJo SINE Alu 3 319 0 1141 108 43 0 chr2 59382497 59382683 -193873900 - L1MA1 LINE L1 -105 6197 6004 878 357 24 12 chr2 59382875 59383697 -193872886 - HERV16 LTR ERVL -765 4999 4127 614 340 47 14 chr2 59383719 59383998 -193872585 - HERV16 LTR ERVL -4707 289 2 683 337 55 3 chr2 59383999 59384290 -193872293 - LTR16A LTR ERVL 0 450 145 1575 187 16 46 chr2 59384291 59384596 -193871987 + AluJo SINE Alu 1 296 -16 878 195 25 0 chr2 59384596 59384755 -193871828 + AluJb SINE Alu 134 296 -16 476 237 38 8 chr2 59384872 59385003 -193871580 - L1ME4a LINE L1 -28 6093 5959 1979 138 0 7 chr2 59386153 59386450 -193870133 + AluJb SINE Alu 1 295 -17 679 300 36 97 chr2 59387128 59387791 -193868792 + L2 LINE L2 1796 2418 -896 888 241 5 10 chr2 59390375 59390578 -193866005 + MER58A DNA MER1_type 21 222 -2 239 261 65 43 chr2 59390588 59390680 -193865903 + L2 LINE L2 3197 3290 -23 670 256 10 62 chr2 59390711 59390906 -193865677 - MIR SINE MIR -13 249 65 621 252 0 22 chr2 59393215 59393354 -193863229 - MIR SINE MIR -122 140 5 283 233 0 44 chr2 59394501 59394591 -193861992 + (CATATA)n Simple_repeat Simple_repeat 2 87 0 426 236 36 0 chr2 59394591 59394756 -193861827 + (TA)n Simple_repeat Simple_repeat 1 171 0 1547 216 24 55 chr2 59394756 59395215 -193861368 - L1MA9 LINE L1 -74 6238 5794 1834 189 14 14 chr2 59395556 59395921 -193860662 - MLT1A1 LTR MaLR 0 365 1 313 360 26 0 chr2 59396630 59396744 -193859839 - MIR SINE MIR -61 147 31 258 325 156 37 chr2 59396796 59397091 -193859492 + L3b LINE CR1 1138 1467 -116 231 88 0 0 chr2 59397091 59397125 -193859458 + (TG)n Simple_repeat Simple_repeat 2 35 0 2354 99 0 13 chr2 59397237 59397549 -193859034 + AluSg SINE Alu 1 308 -2 235 322 0 0 chr2 59397788 59397847 -193858736 + L2 LINE L2 3252 3310 -3 985 115 66 16 chr2 59398960 59399143 -193857440 - L1MA8 LINE L1 -44 6247 6056 202 274 27 27 chr2 59399207 59399280 -193857303 - L2 LINE L2 -79 3234 3162 295 260 21 0 chr2 59399352 59399448 -193857135 + (TA)n Simple_repeat Simple_repeat 1 98 0 200 366 78 7 chr2 59399475 59399628 -193856955 - L2 LINE L2 -255 3017 2854 452 265 72 24 chr2 59400570 59400736 -193855847 - L2 LINE L2 0 3313 3140 216 0 0 0 chr2 59401171 59401195 -193855388 + (TAAA)n Simple_repeat Simple_repeat 4 27 0 2121 153 42 6 chr2 59401196 59401549 -193855034 - MSTB LTR MaLR -60 366 1 202 365 26 9 chr2 59401549 59401664 -193854919 - L2 LINE L2 -337 2976 2860 509 250 158 25 chr2 59401688 59401884 -193854699 - L2 LINE L2 -823 2491 2270 248 162 0 0 chr2 59401908 59401945 -193854638 + MER3 DNA MER1_type 46 82 -127 239 290 0 0 chr2 59402040 59402102 -193854481 - MER3 DNA MER1_type -147 62 1 405 287 92 23 chr2 59402102 59402276 -193854307 - L2 LINE L2 -1092 2222 2037 263 299 37 0 chr2 59402294 59402401 -193854182 - MIR SINE MIR -71 191 81 579 295 68 11 chr2 59402831 59403021 -193853562 - LTR16C LTR ERVL 0 491 291 383 372 36 18 chr2 59403457 59403680 -193852903 + MIR SINE MIR 30 256 -6 24 53 0 0 chr2 59404810 59404848 -193851735 + AT_rich Low_complexity Low_complexity 1 38 0 1286 251 76 5 chr2 59404946 59405340 -193851243 + L1MC4a LINE L1 5254 5675 -2133 331 231 9 9 chr2 59405371 59405479 -193851104 - L1MC4a LINE L1 -1588 6220 6113 2733 248 42 11 chr2 59405503 59406011 -193850572 + L1MC4a LINE L1 6023 6564 -1244 1791 252 35 25 chr2 59406011 59406578 -193850005 - MER90 LTR ERV1 0 575 3 2733 248 42 11 chr2 59406578 59406831 -193849752 + L1MC4a LINE L1 6564 6808 -1000 1068 149 116 58 chr2 59406831 59407072 -193849511 - MER66B LTR ERV1 0 486 232 666 274 0 13 chr2 59407095 59407252 -193849331 - MLT1D LTR MaLR -105 400 246 363 65 0 0 chr2 59407268 59407314 -193849269 - MLT2B2 LTR ERVL 0 515 470 8262 203 55 18 chr2 59407314 59409016 -193847567 - ERVL-B2 LTR ERVL -3999 1765 2 978 173 0 56 chr2 59409017 59409209 -193847374 - MLT2B2 LTR ERVL 0 515 335 909 192 44 122 chr2 59409209 59409552 -193847031 + LTR39 LTR ERV1 1 316 -467 737 247 33 16 chr2 59409618 59409800 -193846783 + LTR39 LTR ERV1 599 783 0 889 235 0 17 chr2 59409800 59409979 -193846604 - MLT2B3 LTR ERVL -217 337 162 787 205 13 7 chr2 59409990 59410141 -193846442 - MLT1D LTR MaLR -353 152 1 256 228 44 15 chr2 59410142 59410278 -193846305 + L1MEc LINE L1 2047 2186 -4210 515 304 30 7 chr2 59410389 59410685 -193845898 + L1MEc LINE L1 3263 3565 -2650 1422 195 3 50 chr2 59410896 59411214 -193845369 - AluJo SINE Alu -7 305 3 884 258 76 84 chr2 59411269 59411924 -193844659 + L1MC5 LINE L1 6625 7274 -687 1104 231 32 101 chr2 59411949 59412356 -193844227 - MLT1B LTR MaLR -11 379 1 503 147 237 20 chr2 59412387 59412585 -193843998 + L1MC5 LINE L1 7321 7561 -400 243 372 145 23 chr2 59412973 59413292 -193843291 + L2 LINE L2 2712 3060 -212 31 0 0 0 chr2 59413854 59413885 -193842698 + AT_rich Low_complexity Low_complexity 1 31 0 4850 103 8 3 chr2 59414479 59415185 -193841398 + L1PA13 LINE L1 5454 6163 0 815 41 0 0 chr2 59415933 59416030 -193840553 + L1PA5 LINE L1 6050 6146 -8 2499 159 7 19 chr2 59416299 59416732 -193839851 - MSTC LTR MaLR 0 428 1 654 167 68 61 chr2 59416824 59416993 -193839590 - FLAM_A SINE Alu 0 170 1 258 346 118 7 chr2 59418199 59418335 -193838248 - L2 LINE L2 -12 3260 3110 228 266 35 97 chr2 59418611 59418724 -193837859 - MIR SINE MIR -129 133 28 24 32 0 0 chr2 59419978 59420009 -193836574 + AT_rich Low_complexity Low_complexity 1 31 0 499 87 0 0 chr2 59421231 59421300 -193835283 - L1P LINE L1 -1460 4686 4618 5885 37 1 0 chr2 59421300 59421999 -193834584 + L1PA4 LINE L1 5442 6142 -13 24 0 0 0 chr2 59421999 59422023 -193834560 + AT_rich Low_complexity Low_complexity 1 24 0 210 356 87 10 chr2 59422043 59422147 -193834436 - MIR SINE MIR -77 131 20 547 288 144 32 chr2 59422573 59423074 -193833509 - L2 LINE L2 -186 3127 2567 2358 113 3 47 chr2 59424166 59424547 -193832036 - THE1B LTR MaLR 0 364 1 335 275 12 0 chr2 59424551 59424631 -193831952 + MIR SINE MIR 15 95 -167 1269 216 12 97 chr2 59424634 59425037 -193831546 + MLT1A2 LTR MaLR 1 369 -5 407 254 44 9 chr2 59425043 59425157 -193831426 + MIR SINE MIR 96 213 -49 23 33 0 0 chr2 59426453 59426483 -193830100 + AT_rich Low_complexity Low_complexity 1 30 0 21 57 0 0 chr2 59426531 59426566 -193830017 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 59426607 59426628 -193829955 + AT_rich Low_complexity Low_complexity 1 21 0 43280 46 2 1 chr2 59426628 59432776 -193823807 - L1PA3 LINE L1 -1 6154 3 302 169 12 12 chr2 59433233 59433316 -193823267 + Zaphod DNA AcHobo 907 989 -3042 1085 198 18 4 chr2 59433372 59433599 -193822984 + Zaphod DNA AcHobo 3801 4030 -1 1148 196 68 68 chr2 59434228 59434396 -193822187 - AluJb SINE Alu -16 296 126 2090 158 5 32 chr2 59434396 59434770 -193821813 - THE1B LTR MaLR 0 364 1 1148 196 68 68 chr2 59434770 59434897 -193821686 - AluJb SINE Alu -185 127 1 309 312 132 19 chr2 59434996 59435307 -193821276 - L1ME4a LINE L1 -159 5962 5617 230 341 22 11 chr2 59435584 59435675 -193820908 - L2 LINE L2 -8 3264 3173 328 320 7 70 chr2 59435891 59436085 -193820498 - HAL1 LINE L1 -30 2477 2305 415 32 16 0 chr2 59436085 59436147 -193820436 - L1MA3 LINE L1 0 6305 6243 328 320 7 70 chr2 59436147 59436236 -193820347 - HAL1 LINE L1 -202 2305 2212 1083 212 24 0 chr2 59436320 59436532 -193820051 - MER20 DNA MER1_type 0 219 3 1419 134 24 40 chr2 59436627 59436874 -193819709 - AluSx SINE Alu -69 243 1 262 293 251 0 chr2 59436957 59437124 -193819459 - HAL1 LINE L1 -547 1960 1752 437 313 54 40 chr2 59437127 59437405 -193819178 - MLT1J LTR MaLR 0 511 230 2106 112 0 13 chr2 59437474 59437779 -193818804 + AluSg1 SINE Alu 4 304 -5 45 19 0 0 chr2 59438010 59438062 -193818521 + AT_rich Low_complexity Low_complexity 1 52 0 2039 276 71 74 chr2 59438067 59439562 -193817021 - HAL1 LINE L1 -862 1645 155 23 0 0 0 chr2 59441502 59441525 -193815058 + AT_rich Low_complexity Low_complexity 1 23 0 29 60 0 0 chr2 59441567 59441617 -193814966 + AT_rich Low_complexity Low_complexity 1 50 0 284 339 43 9 chr2 59443659 59443774 -193812809 + MIR SINE MIR 2 120 -142 1417 72 110 10 chr2 59444222 59444431 -193812152 + MER30 DNA MER1_type 1 230 0 361 284 65 75 chr2 59444632 59444833 -193811750 + MIR SINE MIR 57 255 -7 548 270 46 46 chr2 59444871 59445067 -193811516 - MIR SINE MIR -4 258 63 206 373 138 12 chr2 59446301 59446548 -193810035 + L2 LINE L2 1399 1676 -1638 * 1044 301 150 31 chr2 59446546 59447296 -193809287 - L2 LINE L2 0 3313 2457 781 317 92 28 chr2 59447322 59447921 -193808662 + L1MCc LINE L1 28 664 -5759 22 56 0 0 chr2 59447936 59447972 -193808611 + AT_rich Low_complexity Low_complexity 1 36 0 415 277 39 8 chr2 59447984 59448114 -193808469 - L2 LINE L2 -864 2450 2317 255 333 0 0 chr2 59448510 59448588 -193807995 + MIR SINE MIR 182 259 -3 223 366 52 30 chr2 59449342 59449476 -193807107 + L2 LINE L2 3136 3272 0 2137 165 69 22 chr2 59449581 59449988 -193806595 + MSTB LTR MaLR 1 426 0 442 362 33 16 chr2 59450723 59450966 -193805617 - MIR SINE MIR -4 258 12 227 226 32 0 chr2 59451103 59451165 -193805418 + L1MA4A LINE L1 408 471 -6738 * 515 301 63 38 chr2 59451141 59451380 -193805203 + L1MA4A LINE L1 917 1161 -6048 3698 190 14 14 chr2 59451386 59452186 -193804397 - L1M2 LINE L1 -4610 2239 1440 * 12256 195 29 26 chr2 59452182 59452311 -193804272 + L1MA4A LINE L1 3453 3580 -3785 1649 159 37 0 chr2 59452311 59452582 -193804001 + AluSq SINE Alu 2 282 -31 12256 195 29 26 chr2 59452582 59456360 -193800223 + L1MA4A LINE L1 3580 7361 -4 25 0 0 0 chr2 59457959 59457984 -193798599 + AT_rich Low_complexity Low_complexity 1 25 0 2289 219 40 17 chr2 59460212 59460755 -193795828 - L1MB7 LINE L1 -19 6663 6108 1017 92 33 7 chr2 59460757 59460910 -193795673 - AluSq SINE Alu -141 172 16 560 209 43 11 chr2 59460910 59461126 -193795457 - L1MB7 LINE L1 -575 6103 5767 * 3378 214 33 9 chr2 59461116 59461955 -193794628 - L1MB7 LINE L1 -1392 5252 4394 2292 280 77 34 chr2 59461955 59462829 -193793754 - L1MB7 LINE L1 -5631 911 1 295 266 85 55 chr2 59464325 59464524 -193792059 - MLT1K LTR MaLR 0 588 384 566 307 48 6 chr2 59465193 59465525 -193791058 + L1ME3A LINE L1 3593 3938 -2208 407 312 105 28 chr2 59466078 59467907 -193788676 + L1ME3A LINE L1 3973 5948 -222 1769 53 0 0 chr2 59468907 59469132 -193787451 - L1PA4 LINE L1 -860 5286 5062 * 4728 22 0 0 chr2 59469127 59469680 -193786903 + L1PA4 LINE L1 5284 5836 -319 883 147 147 35 chr2 59469816 59470013 -193786570 - MER20 DNA MER1_type 0 219 1 23 33 0 0 chr2 59471259 59471289 -193785294 + AT_rich Low_complexity Low_complexity 1 30 0 313 347 8 0 chr2 59471338 59471462 -193785121 - MIR3 SINE MIR -6 202 78 22 0 0 0 chr2 59471841 59471863 -193784720 + AT_rich Low_complexity Low_complexity 1 22 0 709 155 99 0 chr2 59472171 59472313 -193784270 - L1M4 LINE L1 -714 5460 5305 * 1406 185 38 142 chr2 59472310 59472832 -193783751 + L1MB7 LINE L1 5629 6091 -93 2468 126 8 3 chr2 59472832 59473205 -193783378 - THE1C LTR MaLR 0 375 1 1406 185 38 142 chr2 59473205 59473238 -193783345 + L1MB7 LINE L1 6091 6126 -58 24 0 0 0 chr2 59473346 59473370 -193783213 + AT_rich Low_complexity Low_complexity 1 24 0 7955 91 11 0 chr2 59473413 59475321 -193781262 - L1PA6 LINE L1 0 6154 4233 7204 48 0 0 chr2 59475315 59476388 -193780195 - L1PA4 LINE L1 0 6155 5102 * 12972 48 3 0 chr2 59476393 59478008 -193778575 + L1PA4 LINE L1 3484 5103 -1043 * 24518 118 74 10 chr2 59478000 59481988 -193774595 - L1PA6 LINE L1 -1894 4252 11 2465 247 33 7 chr2 59482563 59483288 -193773295 - L1M4 LINE L1 -3227 2919 2176 2321 186 4 47 chr2 59483322 59483837 -193772746 - L1MC2 LINE L1 -175 6587 6095 1949 258 63 28 chr2 59483837 59484602 -193771981 - L1MC2 LINE L1 -1647 4917 4126 1445 203 129 25 chr2 59484611 59485044 -193771539 - L1MC2 LINE L1 -4198 2366 1889 * 2072 237 50 9 chr2 59485032 59485594 -193770989 - L1MC2 LINE L1 -4891 1154 570 1862 235 16 48 chr2 59485698 59486276 -193770307 - L1MC2 LINE L1 -5484 561 3 1991 120 7 14 chr2 59486383 59486709 -193769874 + AluSq SINE Alu 1 324 0 200 344 22 11 chr2 59486878 59486968 -193769615 + L2 LINE L2 3223 3313 0 25 0 0 0 chr2 59487303 59487328 -193769255 + AT_rich Low_complexity Low_complexity 1 25 0 545 186 53 0 chr2 59488695 59488808 -193767775 + Charlie4 DNA MER1_type 1823 1941 -20 353 256 25 128 chr2 59489459 59489740 -193766843 - MER112 DNA MER1_type 0 260 9 756 319 4 26 chr2 59489912 59490178 -193766405 - MIR SINE MIR -1 261 2 207 88 0 0 chr2 59490346 59490380 -193766203 + (T)n Simple_repeat Simple_repeat 1 34 0 230 230 27 0 chr2 59491239 59491313 -193765270 + CT-rich Low_complexity Low_complexity 2 77 0 250 175 53 53 chr2 59491330 59491387 -193765196 - L2 LINE L2 -16 3256 3200 2923 67 40 94 chr2 59491944 59492380 -193764203 + MLT2A2 LTR ERVL 1 410 -43 1004 134 6 0 chr2 59492380 59492551 -193764032 + (TA)n Simple_repeat Simple_repeat 2 173 0 2923 67 40 94 chr2 59492551 59492593 -193763990 + MLT2A2 LTR ERVL 410 453 0 42524 84 9 13 chr2 59492593 59498019 -193758564 + HERVL-A2-A2 LTR ERVL 1 5404 -250 2714 35 0 0 chr2 59498019 59498330 -193758253 - AluY SINE Alu 0 311 1 42524 84 9 13 chr2 59498330 59498580 -193758003 + HERVL-A2-A2 LTR ERVL 5404 5654 0 3131 88 44 0 chr2 59498580 59498962 -193757621 + MLT2A2 LTR ERVL 1 406 -47 306 0 0 0 chr2 59498962 59498996 -193757587 + (CA)n Simple_repeat Simple_repeat 1 34 0 3131 88 44 0 chr2 59498996 59499047 -193757536 + MLT2A2 LTR ERVL 406 453 0 232 353 49 55 chr2 59499048 59499380 -193757203 + L2 LINE L2 2730 3060 -212 196 400 138 7 chr2 59499507 59499652 -193756931 + L2 LINE L2 3096 3259 -13 27 0 0 0 chr2 59500362 59500389 -193756194 + AT_rich Low_complexity Low_complexity 1 27 0 780 299 88 53 chr2 59500694 59501125 -193755458 - LTR33A LTR ERVL 0 523 78 2268 112 0 0 chr2 59501629 59501932 -193754651 - AluSx SINE Alu -9 303 1 467 297 135 64 chr2 59502497 59502918 -193753665 - L3 LINE CR1 -328 1249 799 189 328 72 8 chr2 59503608 59503733 -193752850 - L2 LINE L2 -633 2681 2549 2558 110 6 3 chr2 59504319 59504682 -193751901 + THE1B LTR MaLR 1 364 0 795 316 14 37 chr2 59504934 59505285 -193751298 - MLT1I LTR MaLR -47 362 20 22 0 0 0 chr2 59505321 59505343 -193751240 + AT_rich Low_complexity Low_complexity 1 22 0 242 179 54 0 chr2 59505527 59505583 -193751000 - MER103 DNA DNA -26 140 82 272 234 18 72 chr2 59505618 59505785 -193750798 + L1ME4a LINE L1 5765 5922 -199 317 211 222 0 chr2 59505953 59506043 -193750540 + MIR SINE MIR 104 213 -49 1294 133 16 0 chr2 59506079 59506267 -193750316 - AluSx SINE Alu -2 310 120 43544 43 2 2 chr2 59506274 59512423 -193744160 - L1PA4 LINE L1 -8 6147 1 919 136 8 0 chr2 59512434 59512566 -193744017 - AluSx SINE Alu -180 133 1 371 86 0 49 chr2 59514363 59514433 -193742150 - L1MA8 LINE L1 -330 5970 5914 * 1028 197 91 0 chr2 59514421 59514685 -193741898 + L1MA8 LINE L1 6000 6287 -4 22 56 0 0 chr2 59514685 59514721 -193741862 + AT_rich Low_complexity Low_complexity 1 36 0 287 349 9 9 chr2 59514789 59514895 -193741688 + L2 LINE L2 3167 3272 0 474 337 35 0 chr2 59514963 59515165 -193741418 - LTR16A LTR ERVL 0 450 242 301 344 43 21 chr2 59515506 59515692 -193740891 - ERVL LTR ERVL -630 5134 4945 924 343 22 47 chr2 59515756 59516290 -193740293 - ERVL LTR ERVL -964 4800 4280 854 202 5 31 chr2 59518010 59518203 -193738380 + MER3 DNA MER1_type 22 209 0 234 0 0 0 chr2 59518270 59518296 -193738287 + (T)n Simple_repeat Simple_repeat 1 26 0 269 327 45 58 chr2 59518463 59518619 -193737964 - L2 LINE L2 -10 3262 3109 932 268 108 37 chr2 59518678 59519114 -193737469 + MLT1C LTR MaLR 1 467 0 534 250 68 14 chr2 59519289 59519437 -193737146 + L2 LINE L2 3158 3313 0 4360 162 34 12 chr2 59520229 59521083 -193735500 + L1MA8 LINE L1 5405 6277 -14 831 169 98 18 chr2 59521097 59521353 -193735230 + L1MA8 LINE L1 6025 6300 0 195 100 0 0 chr2 59521670 59521700 -193734883 + (TC)n Simple_repeat Simple_repeat 1 30 0 1448 194 52 10 chr2 59522028 59522149 -193734434 + AluJo SINE Alu 2 116 -196 411 21 0 0 chr2 59522149 59522197 -193734386 + (TAA)n Simple_repeat Simple_repeat 2 49 0 1448 194 52 10 chr2 59522197 59522363 -193734220 + AluJo SINE Alu 116 301 -11 2067 113 7 45 chr2 59522671 59522980 -193733603 + AluSg SINE Alu 5 301 -9 219 405 0 13 chr2 59524173 59524252 -193732331 - MIR SINE MIR -164 98 21 443 281 70 70 chr2 59525525 59525645 -193730938 + MIR SINE MIR 3 122 -140 1810 203 28 0 chr2 59525645 59526000 -193730583 + MLT1A1 LTR MaLR 1 365 0 443 281 70 70 chr2 59526000 59526127 -193730456 + MIR SINE MIR 122 249 -13 257 246 0 0 chr2 59527912 59527969 -193728614 + L2 LINE L2 3257 3313 0 518 262 18 60 chr2 59528720 59528888 -193727695 - L2 LINE L2 0 3313 3153 300 283 98 40 chr2 59529158 59529331 -193727252 - MIR SINE MIR -57 205 23 239 336 119 14 chr2 59529610 59529753 -193726830 + L2 LINE L2 2329 2486 -828 245 350 0 0 chr2 59530026 59530086 -193726497 + L2 LINE L2 3207 3266 -47 1786 241 112 25 chr2 59530148 59530666 -193725917 + MLT1E LTR MaLR 31 593 0 279 54 0 0 chr2 59531781 59531818 -193724765 - L1PA6 LINE L1 -7 6147 6111 185 286 57 29 chr2 59532136 59532206 -193724377 - MIR3 SINE MIR -129 79 8 7050 59 4 1 chr2 59532218 59533161 -193723422 - L1P LINE L1 -2939 3207 2262 7375 40 1 1 chr2 59533161 59534302 -193722281 + L1PA4 LINE L1 5014 6154 -1 30 69 0 0 chr2 59534305 59534363 -193722220 + AT_rich Low_complexity Low_complexity 1 58 0 2055 133 17 0 chr2 59534379 59534681 -193721902 + AluSx SINE Alu 1 307 -5 15560 30 0 0 chr2 59535331 59537960 -193718623 - L1PA3 LINE L1 0 6155 3529 15945 28 0 0 chr2 59537960 59539896 -193716687 + L1PA3 LINE L1 1576 3511 -2635 321 331 111 52 chr2 59540257 59540429 -193716154 - MIR3 SINE MIR -8 200 19 315 71 0 0 chr2 59540560 59540602 -193715981 + (TG)n Simple_repeat Simple_repeat 2 43 0 1031 378 24 2 chr2 59540789 59541244 -193715339 + MER115 DNA AcHobo 225 689 -4 237 114 0 0 chr2 59541548 59541583 -193715000 - L2 LINE L2 0 3313 3279 373 338 60 39 chr2 59542443 59542727 -193713856 + HERV16 LTR ERVL 1272 1561 -3435 180 0 0 0 chr2 59542740 59542760 -193713823 + (TTA)n Simple_repeat Simple_repeat 1 20 0 2122 119 0 0 chr2 59542774 59543096 -193713487 + AluSq SINE Alu 1 322 0 505 333 106 15 chr2 59543134 59543407 -193713176 + HERV16 LTR ERVL 1734 2031 -2965 26 0 0 0 chr2 59544410 59544436 -193712147 + AT_rich Low_complexity Low_complexity 1 26 0 4927 162 27 3 chr2 59544436 59545097 -193711486 - L1PA16 LINE L1 -9 6860 6171 2019 134 3 13 chr2 59545097 59545410 -193711173 - AluSx SINE Alu -2 310 1 4927 162 27 3 chr2 59545410 59545697 -193710886 - L1PA16 LINE L1 -698 6171 5892 * 9737 168 25 63 chr2 59545694 59546216 -193710367 - L1PA16 LINE L1 -4176 2673 2133 2194 113 0 3 chr2 59546216 59546517 -193710066 - AluSg SINE Alu -10 300 1 9737 168 25 63 chr2 59546517 59548891 -193707692 - L1PA16 LINE L1 -4716 2133 1 782 242 17 69 chr2 59551034 59551265 -193705318 - MER20 DNA MER1_type 0 219 1 384 314 117 16 chr2 59551315 59551503 -193705080 - MLT1J2 LTR MaLR -41 409 203 1894 152 37 52 chr2 59552696 59552872 -193703711 + THE1C LTR MaLR 1 178 -197 2099 94 7 0 chr2 59552872 59553171 -193703412 - L1PA8 LINE L1 -11 6161 5861 1894 152 37 52 chr2 59553171 59553375 -193703208 + THE1C LTR MaLR 178 375 0 2382 55 3 0 chr2 59553536 59553826 -193702757 + AluY SINE Alu 3 293 -18 229 167 17 17 chr2 59553869 59553929 -193702654 + (TA)n Simple_repeat Simple_repeat 1 60 0 491 257 169 7 chr2 59555171 59555319 -193701264 - MER5A DNA MER1_type -5 184 13 544 300 49 33 chr2 59555430 59555673 -193700910 + MIR SINE MIR 16 262 0 375 299 19 19 chr2 59556189 59556296 -193700287 + MIR SINE MIR 36 142 -66 4113 34 0 0 chr2 59557682 59558184 -193698399 - L1P LINE L1 -4279 1867 1366 7932 9 0 0 chr2 59558184 59559106 -193697477 + L1PA2 LINE L1 5233 6154 -1 270 75 189 0 chr2 59559114 59559167 -193697416 - Tigger3(Golem) DNA MER2_type -420 2609 2547 294 292 163 19 chr2 59561453 59561662 -193694921 - MIR SINE MIR -14 248 10 398 286 37 12 chr2 59562462 59562623 -193693960 - MER103 DNA DNA -1 165 1 241 306 163 14 chr2 59563045 59563192 -193693391 + MIR SINE MIR 47 215 -47 7276 226 12 4 chr2 59565249 59567073 -193689510 + L1PA12 LINE L1 2817 4663 -2921 3927 205 12 18 chr2 59567079 59567975 -193688608 - L1P LINE L1 -1956 4190 3300 1580 152 4 0 chr2 59567976 59568220 -193688363 + L1PA15 LINE L1 5912 6156 -9 1067 269 16 71 chr2 59568907 59569345 -193687238 + L1ME1 LINE L1 34 447 -5949 5979 262 58 30 chr2 59569363 59572618 -193683965 + L1ME1 LINE L1 2898 6229 -6 303 308 44 19 chr2 59572901 59573060 -193683523 - L1 LINE L1 -1925 4221 4059 345 348 72 13 chr2 59573168 59573404 -193683179 - L1 LINE L1 -2171 3975 3726 421 259 64 91 chr2 59574264 59574484 -193682099 - MER58C DNA MER1_type -1 214 1 333 0 0 0 chr2 59574736 59574773 -193681810 + (TG)n Simple_repeat Simple_repeat 2 38 0 612 333 47 32 chr2 59576363 59576805 -193679778 + L2 LINE L2 2697 3145 -168 282 163 12 23 chr2 59577183 59577269 -193679314 + (TA)n Simple_repeat Simple_repeat 2 86 0 33 80 0 0 chr2 59577810 59577885 -193678698 + AT_rich Low_complexity Low_complexity 1 75 0 454 288 140 86 chr2 59578272 59578751 -193677832 + MLT1H LTR MaLR 32 536 -13 771 199 153 30 chr2 59578755 59578991 -193677592 - L1MD3 LINE L1 -8 7987 7723 461 277 170 0 chr2 59579098 59579257 -193677326 - MER5A DNA MER1_type 0 189 4 183 156 67 22 chr2 59580248 59580293 -193676290 - L3 LINE CR1 -304 1273 1227 462 295 95 0 chr2 59581815 59582005 -193674578 + MIR SINE MIR 4 211 -51 1912 214 70 47 chr2 59583038 59583975 -193672608 - MER63C DNA MER1_type -93 837 2 1369 192 107 65 chr2 59584144 59584591 -193671992 - MER31B LTR ERV1 0 466 1 24 32 0 0 chr2 59585802 59585833 -193670750 + AT_rich Low_complexity Low_complexity 1 31 0 375 172 49 25 chr2 59585857 59585979 -193670604 + L1ME4a LINE L1 5991 6115 -6 21 0 0 0 chr2 59586191 59586212 -193670371 + AT_rich Low_complexity Low_complexity 1 21 0 336 299 141 32 chr2 59586556 59587081 -193669502 - HAL1 LINE L1 -766 1741 1160 2461 71 3 0 chr2 59587757 59588067 -193668516 + AluY SINE Alu 1 311 0 199 346 77 31 chr2 59588465 59588595 -193667988 - MIR SINE MIR -108 154 19 350 306 45 30 chr2 59588770 59588904 -193667679 - MIR SINE MIR 0 262 127 235 234 11 117 chr2 59588904 59588998 -193667585 + MER58 DNA MER1_type 12 95 -2325 335 212 40 20 chr2 59589015 59589114 -193667469 + MER58 DNA MER1_type 2318 2418 -2 315 0 0 0 chr2 59589335 59589370 -193667213 + (TG)n Simple_repeat Simple_repeat 2 36 0 1002 162 71 10 chr2 59591314 59591511 -193665072 - MER2 DNA MER2_type -136 209 1 1289 116 0 73 chr2 59591994 59592226 -193664357 + L1M1 LINE L1 5560 5774 -530 23 54 0 0 chr2 59592672 59592709 -193663874 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr2 59592753 59592776 -193663807 + AT_rich Low_complexity Low_complexity 1 23 0 340 245 52 18 chr2 59593359 59593471 -193663112 + MER58B DNA MER1_type 5 106 -235 354 190 38 0 chr2 59593507 59593586 -193662997 - MER53 DNA DNA -106 83 2 2538 108 0 6 chr2 59594190 59594543 -193662040 + MER9 LTR ERVK 161 511 0 20065 82 7 6 chr2 59594543 59595305 -193661278 + HERVK9 LTR ERVK 1 760 -5156 181 250 0 83 chr2 59595305 59595365 -193661218 + MER5B DNA MER1_type 55 109 -69 20065 82 7 6 chr2 59595365 59597325 -193659258 + HERVK9 LTR ERVK 760 2786 -3130 3407 26 0 0 chr2 59597325 59597715 -193658868 + HERVK9 LTR ERVK 3711 4100 -1816 * 4988 83 6 0 chr2 59597714 59598364 -193658219 + HERVK9 LTR ERVK 4981 5634 -282 2189 128 7 4 chr2 59598389 59598734 -193657849 + HERVK9 LTR ERVK 5635 5911 -5 3496 118 6 4 chr2 59598739 59599249 -193657334 + MER9 LTR ERVK 1 511 0 9780 44 7 6 chr2 59599249 59600937 -193655646 - L1PA5 LINE L1 -325 5829 4145 6158 57 1 2 chr2 59600937 59601725 -193654858 + L1PA5 LINE L1 3355 4141 -2005 5581 131 2 14 chr2 59601730 59602646 -193653937 - L1PA15 LINE L1 -6 6159 5255 2357 179 33 8 chr2 59602642 59603123 -193653460 + L1PA15 LINE L1 4731 5223 -923 * 198 220 0 0 chr2 59603427 59603486 -193653097 + (TA)n Simple_repeat Simple_repeat 1 59 0 582 349 73 35 chr2 59604675 59605261 -193651322 + L2 LINE L2 2432 3043 -229 579 297 35 55 chr2 59605303 59605475 -193651108 + MIR SINE MIR 12 179 -83 3508 164 26 10 chr2 59605475 59606154 -193650429 + L1MA6 LINE L1 5598 6287 -13 579 297 35 55 chr2 59606154 59606237 -193650346 + MIR SINE MIR 179 262 0 183 377 84 78 chr2 59606271 59606425 -193650158 + L2 LINE L2 3110 3264 -8 222 128 0 0 chr2 59607658 59607697 -193648886 + (TAA)n Simple_repeat Simple_repeat 1 39 0 2697 172 28 2 chr2 59608725 59609197 -193647386 + Tigger1 DNA MER2_type 13 496 -1922 2684 35 0 0 chr2 59609197 59609513 -193647070 - L1P1 LINE L1 -381 5774 5459 1924 31 0 0 chr2 59609513 59609740 -193646843 + L1PA5 LINE L1 5919 6145 -9 468 116 0 0 chr2 59609751 59609820 -193646763 + Tigger1 DNA MER2_type 482 550 -1868 * 8671 136 35 24 chr2 59609804 59611286 -193645297 + Tigger1 DNA MER2_type 920 2418 0 237 108 0 0 chr2 59614367 59614404 -193642179 + (TCCCC)n Simple_repeat Simple_repeat 2 38 0 271 263 0 0 chr2 59614405 59614462 -193642121 + CT-rich Low_complexity Low_complexity 4 60 0 21 0 0 0 chr2 59614557 59614578 -193642005 + AT_rich Low_complexity Low_complexity 1 21 0 268 275 22 0 chr2 59614581 59614672 -193641911 - L1M4 LINE L1 -2117 4029 3937 204 97 0 0 chr2 59614979 59615010 -193641573 + (TG)n Simple_repeat Simple_repeat 2 32 0 42 20 0 0 chr2 59615072 59615121 -193641462 + AT_rich Low_complexity Low_complexity 1 49 0 22 0 0 0 chr2 59615173 59615195 -193641388 + AT_rich Low_complexity Low_complexity 1 22 0 371 273 79 4 chr2 59615297 59615524 -193641059 - L1M4 LINE L1 -2923 3223 2980 22 35 0 0 chr2 59615654 59615683 -193640900 + AT_rich Low_complexity Low_complexity 1 29 0 212 354 85 46 chr2 59615934 59616064 -193640519 + MIR SINE MIR 1 135 -127 915 240 55 16 chr2 59616856 59617338 -193639245 + MER34 LTR ERV1 11 542 0 309 51 0 0 chr2 59618703 59618742 -193637841 + (TG)n Simple_repeat Simple_repeat 2 40 0 21 57 0 0 chr2 59618775 59618810 -193637773 + AT_rich Low_complexity Low_complexity 1 35 0 26 50 0 0 chr2 59618884 59618924 -193637659 + AT_rich Low_complexity Low_complexity 1 40 0 515 241 80 19 chr2 59619540 59619702 -193636881 - MER5B DNA MER1_type -4 174 3 437 272 54 60 chr2 59619795 59619979 -193636604 - MIR SINE MIR -33 229 47 982 238 59 18 chr2 59620170 59620456 -193636127 + MER58B DNA MER1_type 39 336 -5 24 0 0 0 chr2 59620476 59620500 -193636083 + AT_rich Low_complexity Low_complexity 1 24 0 1311 168 31 0 chr2 59620628 59620884 -193635699 - L1MA6 LINE L1 -322 5978 5715 506 295 22 27 chr2 59621220 59621403 -193635180 + MER5A DNA MER1_type 2 183 -6 462 256 50 33 chr2 59621743 59621923 -193634660 + LTR33 LTR ERVL 1 183 -338 223 414 6 25 chr2 59622277 59622434 -193634149 + L2 LINE L2 2907 3060 -212 209 265 36 0 chr2 59624145 59624228 -193632355 + (TA)n Simple_repeat Simple_repeat 2 87 0 21 0 0 0 chr2 59626194 59626215 -193630368 + AT_rich Low_complexity Low_complexity 1 21 0 476 250 16 0 chr2 59626960 59627088 -193629495 + MER115 DNA AcHobo 553 682 -11 230 346 96 0 chr2 59627461 59627565 -193629018 - MIR SINE MIR -77 131 18 245 278 59 91 chr2 59627582 59627769 -193628814 + L2 LINE L2 3114 3294 -19 395 319 49 5 chr2 59627808 59628010 -193628573 + MIR SINE MIR 12 218 -44 304 231 48 87 chr2 59630138 59630242 -193626341 - L2 LINE L2 -21 3292 3193 27 49 0 0 chr2 59631890 59631931 -193624652 + AT_rich Low_complexity Low_complexity 1 41 0 210 244 115 26 chr2 59632157 59632235 -193624348 - L2 LINE L2 -20 3252 3168 360 321 187 23 chr2 59632271 59632576 -193624007 + L2 LINE L2 2292 2646 -668 445 298 8 0 chr2 59632736 59632860 -193623723 - MIR SINE MIR -15 247 123 981 215 56 0 chr2 59633690 59633904 -193622679 - MLT1E LTR MaLR -23 570 345 852 226 37 46 chr2 59633915 59634132 -193622451 - MLT1E LTR MaLR -353 240 26 776 238 0 0 chr2 59634173 59634316 -193622267 - FRAM SINE Alu -25 151 9 7395 88 0 0 chr2 59634746 59636578 -193620005 + L1PA7 LINE L1 4323 6148 -6 252 77 0 0 chr2 59638264 59638303 -193618280 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 29 47 0 0 chr2 59638511 59638554 -193618029 + AT_rich Low_complexity Low_complexity 1 43 0 267 31 0 0 chr2 59639326 59639358 -193617225 + (TA)n Simple_repeat Simple_repeat 2 33 0 280 340 62 21 chr2 59639884 59640028 -193616555 - MIR3 SINE MIR -18 190 41 2258 116 47 14 chr2 59640848 59641211 -193615372 + THE1C LTR MaLR 1 375 0 21 0 0 0 chr2 59641449 59641470 -193615113 + AT_rich Low_complexity Low_complexity 1 21 0 204 321 12 37 chr2 59643123 59643204 -193613379 + L2 LINE L2 3103 3181 -91 26 50 0 0 chr2 59643549 59643589 -193612994 + AT_rich Low_complexity Low_complexity 1 40 0 211 344 97 7 chr2 59644420 59644574 -193612009 - L2 LINE L2 -291 2981 2814 344 324 84 67 chr2 59644608 59644846 -193611737 - MIR SINE MIR -6 256 15 382 373 0 16 chr2 59645520 59645646 -193610937 - L2 LINE L2 -4 3268 3145 2033 189 65 2 chr2 59645647 59646092 -193610491 + L1MB7 LINE L1 5529 6001 -183 439 174 0 0 chr2 59646099 59646191 -193610392 - L1M4 LINE L1 -2367 3779 3688 310 280 53 8 chr2 59646252 59646384 -193610199 + L1ME2 LINE L1 3437 3574 -2572 * 490 240 14 7 chr2 59646352 59646498 -193610085 + L1ME2 LINE L1 4456 4602 -1544 1214 115 19 6 chr2 59646835 59646852 -193609731 - MLT2A1 LTR ERVL -24 530 515 216 0 0 0 chr2 59646852 59646876 -193609707 + (TA)n Simple_repeat Simple_repeat 1 24 0 1214 115 19 6 chr2 59646876 59647046 -193609537 - MLT2A1 LTR ERVL -39 515 221 439 295 122 24 chr2 59647105 59647570 -193609013 + L1ME2 LINE L1 5128 5632 -534 253 231 13 13 chr2 59647587 59647665 -193608918 + MER112 DNA MER1_type 8 85 -175 3616 125 36 0 chr2 59647945 59648521 -193608062 - L1PA13 LINE L1 -3 6160 5564 286 282 82 11 chr2 59648537 59648746 -193607837 + L1ME2 LINE L1 5731 5959 -205 1611 180 10 26 chr2 59650167 59650473 -193606110 - AluJo SINE Alu -9 303 3 355 179 53 21 chr2 59650823 59650918 -193605665 + L1ME1 LINE L1 31 128 -6295 * 16378 72 1 0 chr2 59650906 59653024 -193603559 - L1P LINE L1 -4024 2122 4 985 226 9 0 chr2 59653024 59653236 -193603347 + L1MB7 LINE L1 5913 6126 -58 5450 164 38 20 chr2 59653267 59655187 -193601396 + L1MA6 LINE L1 4349 6300 0 968 294 95 13 chr2 59655202 59655899 -193600684 + L1ME1 LINE L1 1715 2468 -4654 * 2914 239 51 31 chr2 59655889 59656859 -193599724 + L1ME1 LINE L1 5971 6957 -4 1982 128 0 49 chr2 59657261 59657589 -193598994 - AluSx SINE Alu 0 312 1 982 102 0 22 chr2 59657589 59657726 -193598857 - AluSq/x SINE Alu -178 135 2 547 277 140 41 chr2 59658280 59658572 -193598011 - L2 LINE L2 -32 3281 2961 385 247 11 32 chr2 59658677 59658770 -193597813 - MER2 DNA MER2_type -247 98 8 401 272 109 51 chr2 59658779 59659055 -193597528 - HAL1 LINE L1 -1419 1088 797 596 283 50 47 chr2 59659104 59659422 -193597161 - HAL1 LINE L1 -1785 722 404 22 35 0 0 chr2 59659833 59659862 -193596721 + AT_rich Low_complexity Low_complexity 1 29 0 328 294 93 26 chr2 59660100 59660294 -193596289 - L1ME2 LINE L1 -213 5951 5745 207 186 0 0 chr2 59660294 59660337 -193596246 + (TA)n Simple_repeat Simple_repeat 1 43 0 242 233 0 33 chr2 59660337 59660397 -193596186 - L1ME2 LINE L1 -449 5721 5664 410 191 0 142 chr2 59661429 59661591 -193594992 - L1ME2 LINE L1 -618 5546 5408 411 300 23 0 chr2 59661606 59661736 -193594847 + LTR67 LTR ERVL 414 546 -11 227 305 146 61 chr2 59662268 59662432 -193594151 + MER5B DNA MER1_type 1 178 0 389 288 41 27 chr2 59663171 59663317 -193593266 - L2 LINE L2 -1 3312 3165 27 49 0 0 chr2 59663524 59663565 -193593018 + AT_rich Low_complexity Low_complexity 1 41 0 180 176 0 0 chr2 59664512 59664546 -193592037 + T-rich Low_complexity Low_complexity 2 35 0 629 334 62 73 chr2 59664951 59665540 -193591043 - L2 LINE L2 -420 2894 2315 11716 33 6 0 chr2 59665540 59667708 -193588875 + L1PA3 LINE L1 3978 6150 -5 629 334 62 73 chr2 59667708 59667945 -193588638 - L2 LINE L2 -999 2315 2077 22 56 0 0 chr2 59668553 59668589 -193587994 + AT_rich Low_complexity Low_complexity 1 36 0 260 70 23 0 chr2 59669867 59669910 -193586673 + (CA)n Simple_repeat Simple_repeat 1 44 0 969 239 15 5 chr2 59670852 59671049 -193585534 + MLT1A1 LTR MaLR 144 342 -23 725 172 13 40 chr2 59671049 59671200 -193585383 - MLT1A1 LTR MaLR -218 147 1 1125 311 37 39 chr2 59671548 59672059 -193584524 + LTR33 LTR ERVL 12 521 0 449 317 145 30 chr2 59672419 59672791 -193583792 + L2 LINE L2 2859 3273 -40 2995 201 48 28 chr2 59672798 59672835 -193583748 - L1MB8 LINE L1 -1 6177 6142 219 69 0 0 chr2 59672835 59672864 -193583719 + (TCTA)n Simple_repeat Simple_repeat 2 30 0 2995 201 48 28 chr2 59672864 59673542 -193583041 - L1MB8 LINE L1 -36 6142 5448 1208 239 54 57 chr2 59673739 59674111 -193582472 + MLT1A2 LTR MaLR 4 374 0 2237 101 10 0 chr2 59675097 59675405 -193581178 - AluSp SINE Alu -2 311 1 208 200 31 77 chr2 59675493 59675558 -193581025 - L2 LINE L2 -94 3219 3158 451 319 326 3 chr2 59675643 59676035 -193580548 - L2 LINE L2 -337 2977 2459 470 207 0 0 chr2 59677144 59677226 -193579357 + MER58B DNA MER1_type 260 341 0 273 250 170 18 chr2 59677430 59677542 -193579041 + L1ME3A LINE L1 6040 6168 -2 22 35 0 0 chr2 59679028 59679057 -193577526 + AT_rich Low_complexity Low_complexity 1 29 0 238 250 103 0 chr2 59679231 59679299 -193577284 + MER81 DNA DNA 39 113 -1 797 275 6 0 chr2 59679371 59679542 -193577041 - MER58A DNA MER1_type -49 175 4 261 301 59 146 chr2 59680032 59680470 -193576113 + L2 LINE L2 2854 3253 -19 792 233 11 6 chr2 59681355 59681531 -193575052 - MER5B DNA MER1_type -1 177 1 322 212 91 50 chr2 59681654 59681733 -193574850 + MER5A DNA MER1_type 10 95 -94 2497 146 65 40 chr2 59681733 59682239 -193574344 - LTR44 LTR ERV1 0 519 1 322 212 91 50 chr2 59682239 59682258 -193574325 + MER5A DNA MER1_type 95 112 -77 354 45 0 0 chr2 59682634 59682678 -193573905 + (TA)n Simple_repeat Simple_repeat 2 45 0 23 0 0 0 chr2 59684887 59684910 -193571673 + AT_rich Low_complexity Low_complexity 1 23 0 441 242 232 28 chr2 59684910 59685121 -193571462 - MIR SINE MIR -8 254 1 2159 117 34 23 chr2 59686230 59686580 -193570003 + THE1B LTR MaLR 1 354 -10 21 0 0 0 chr2 59686807 59686828 -193569755 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr2 59687377 59687403 -193569180 + AT_rich Low_complexity Low_complexity 1 26 0 3212 164 17 7 chr2 59688304 59688889 -193567694 + L1MC1 LINE L1 5734 6324 -9 22 35 0 0 chr2 59689085 59689114 -193567469 + AT_rich Low_complexity Low_complexity 1 29 0 207 179 12 60 chr2 59690255 59690339 -193566244 + (TAA)n Simple_repeat Simple_repeat 1 80 0 2485 70 0 0 chr2 59690449 59690751 -193565832 + AluY SINE Alu 1 302 -9 448 108 0 0 chr2 59691098 59691163 -193565420 + L1PA8 LINE L1 6 70 -6391 26503 133 11 47 chr2 59691173 59692249 -193564334 + L1PA8 LINE L1 314 1427 -5034 2417 67 7 0 chr2 59692249 59692548 -193564035 + AluY SINE Alu 1 301 -10 26503 133 11 47 chr2 59692548 59696350 -193560233 + L1PA8 LINE L1 1427 5080 -1381 189 0 0 0 chr2 59696350 59696371 -193560212 + (CA)n Simple_repeat Simple_repeat 2 22 0 26503 133 11 47 chr2 59696371 59696842 -193559741 + L1PA8 LINE L1 5080 5567 -894 6800 72 9 1 chr2 59696843 59697753 -193558830 + L1PA8 LINE L1 5569 6485 -2 1746 204 56 22 chr2 59697923 59698343 -193558240 + MLT1D LTR MaLR 25 381 -47 334 353 26 13 chr2 59698424 59698580 -193558003 - MER5A DNA MER1_type -8 181 24 2315 127 14 3 chr2 59699503 59699866 -193556717 + L1PA13 LINE L1 5795 6161 -2 196 314 146 22 chr2 59700885 59701022 -193555561 - MIR SINE MIR -89 173 20 288 312 72 29 chr2 59701635 59701773 -193554810 - MLT1J2 LTR MaLR -306 144 1 195 162 0 0 chr2 59702237 59702274 -193554309 + (TA)n Simple_repeat Simple_repeat 1 37 0 2271 107 0 0 chr2 59704064 59704364 -193552219 + AluSx SINE Alu 3 302 -10 306 359 92 34 chr2 59704371 59704666 -193551917 - MLT1K LTR MaLR -2 586 275 2762 13 0 0 chr2 59704777 59705085 -193551498 + AluYb8 SINE Alu 1 308 -10 1964 155 0 0 chr2 59705089 59705385 -193551198 + AluSx SINE Alu 1 296 -16 21 71 0 0 chr2 59705707 59705749 -193550834 + AT_rich Low_complexity Low_complexity 1 42 0 410 308 77 26 chr2 59706360 59706633 -193549950 + L1ME LINE L1 5469 5755 -366 358 122 44 11 chr2 59706893 59706983 -193549600 + GA-rich Low_complexity Low_complexity 4 96 0 692 301 138 44 chr2 59707059 59707514 -193549069 - MLT1H LTR MaLR -9 540 43 578 344 49 56 chr2 59707601 59708087 -193548496 + L1MC/D LINE L1 5300 5782 -2026 2174 117 3 0 chr2 59708179 59708487 -193548096 + AluSp SINE Alu 1 309 -4 1628 176 45 0 chr2 59708690 59708810 -193547773 + AluSx SINE Alu 1 114 -198 238 0 26 51 chr2 59708810 59708849 -193547734 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 1628 176 45 0 chr2 59708849 59709017 -193547566 + AluSx SINE Alu 114 302 -10 231 250 152 98 chr2 59709085 59709269 -193547314 - L2 LINE L2 -1 3312 3119 305 327 62 18 chr2 59709331 59709444 -193547139 - L2 LINE L2 -18 3295 3178 450 286 80 36 chr2 59710710 59711011 -193545572 + L1M4 LINE L1 4560 4873 -1273 207 0 0 0 chr2 59711487 59711510 -193545073 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr2 59711728 59711750 -193544833 + AT_rich Low_complexity Low_complexity 1 22 0 706 237 19 10 chr2 59711832 59712039 -193544544 - L1ME2 LINE L1 -213 5951 5743 281 303 67 12 chr2 59712118 59712305 -193544278 - MER58 DNA MER1_type -1 2419 9 1483 148 42 110 chr2 59712368 59712409 -193544174 - THE1C LTR MaLR 0 375 333 5935 107 2 5 chr2 59712409 59713410 -193543173 + L1PB1 LINE L1 5148 6146 -5 1483 148 42 110 chr2 59713410 59713768 -193542815 - THE1C LTR MaLR -42 333 3 480 211 92 14 chr2 59713771 59713913 -193542670 - L1M4 LINE L1 -1950 4196 4044 21 0 0 0 chr2 59714166 59714187 -193542396 + AT_rich Low_complexity Low_complexity 1 21 0 352 304 74 14 chr2 59714303 59714451 -193542132 + MER58B DNA MER1_type 185 341 0 312 376 38 13 chr2 59714507 59714664 -193541919 - L1M4 LINE L1 -1956 4190 4030 382 324 83 12 chr2 59715025 59715278 -193541305 - L1MDb LINE L1 -4614 2107 1837 266 49 0 24 chr2 59715312 59715353 -193541230 + (TTTTA)n Simple_repeat Simple_repeat 1 40 0 2252 44 0 0 chr2 59715353 59715623 -193540960 - L1PA3 LINE L1 -24 6131 5862 286 306 43 30 chr2 59715768 59716000 -193540583 - L1MDb LINE L1 -4925 1605 1371 464 232 11 53 chr2 59716007 59716197 -193540386 - L1MDb LINE L1 -5066 1477 1296 * 990 224 33 0 chr2 59716192 59716437 -193540146 - L1MC3 LINE L1 0 7785 7533 326 231 34 51 chr2 59716440 59716557 -193540026 - L1MC3 LINE L1 -835 6950 6836 209 176 0 0 chr2 59716670 59716704 -193539879 + (TG)n Simple_repeat Simple_repeat 2 35 0 795 310 42 16 chr2 59716704 59717087 -193539496 - L1MDb LINE L1 -6119 421 105 25 51 0 0 chr2 59717370 59717409 -193539174 + AT_rich Low_complexity Low_complexity 1 39 0 225 356 15 15 chr2 59718032 59718167 -193538416 - L1 LINE L1 -3377 2769 2635 417 309 22 15 chr2 59720287 59720423 -193536160 - L2 LINE L2 -1068 2246 2110 270 330 31 92 chr2 59720545 59720806 -193535777 - L2 LINE L2 -2114 1200 956 292 363 75 38 chr2 59720855 59721175 -193535408 - L2 LINE L2 -2596 718 387 3179 129 34 11 chr2 59721175 59721710 -193534873 + LTR10A LTR ERV1 1 547 -62 3051 182 25 13 chr2 59722366 59722419 -193534164 - L1P LINE L1 -797 5349 5298 226 0 59 0 chr2 59722419 59722453 -193534130 + (TA)n Simple_repeat Simple_repeat 1 36 0 3051 182 25 13 chr2 59722453 59723030 -193533553 - L1P LINE L1 -848 5298 4711 1453 65 0 0 chr2 59723030 59723213 -193533370 + L1PA11 LINE L1 5985 6168 -6 24 32 0 0 chr2 59724958 59724989 -193531594 + AT_rich Low_complexity Low_complexity 1 31 0 279 345 122 9 chr2 59725088 59725317 -193531266 + L2 LINE L2 2172 2426 -888 793 218 164 17 chr2 59725989 59726287 -193530296 + MER69 DNA AcHobo 2180 2521 -5 277 156 16 16 chr2 59726688 59726752 -193529831 + CT-rich Low_complexity Low_complexity 1 64 0 1717 155 0 25 chr2 59726759 59727043 -193529540 - AluSx SINE Alu -35 277 1 200 246 14 0 chr2 59727045 59727114 -193529469 + CT-rich Low_complexity Low_complexity 5 74 0 197 146 21 0 chr2 59728208 59728256 -193528327 + (TA)n Simple_repeat Simple_repeat 1 49 0 22 56 0 0 chr2 59728283 59728319 -193528264 + AT_rich Low_complexity Low_complexity 1 36 0 29 0 0 0 chr2 59728359 59728388 -193528195 + AT_rich Low_complexity Low_complexity 1 29 0 908 246 99 52 chr2 59728393 59728868 -193527715 - L1ME1 LINE L1 -2 6440 5956 394 301 42 16 chr2 59728884 59729077 -193527506 - L1ME1 LINE L1 -2535 3891 3694 650 280 38 4 chr2 59729108 59729344 -193527239 - L1ME1 LINE L1 -3913 2694 2451 3852 142 80 15 chr2 59729346 59729599 -193526984 + Tigger3b DNA MER2_type 2 237 -2791 198 0 0 0 chr2 59729599 59729621 -193526962 + (CTATA)n Simple_repeat Simple_repeat 1 22 0 3852 142 80 15 chr2 59729621 59730095 -193526488 + Tigger3b DNA MER2_type 237 776 -455 10161 223 23 16 chr2 59730114 59733465 -193523118 - L1PA15 LINE L1 -8 6808 3481 328 85 0 0 chr2 59733465 59733512 -193523071 + (TTTA)n Simple_repeat Simple_repeat 2 148 0 1125 271 3 0 chr2 59733512 59733796 -193522787 - AluJo SINE Alu -16 286 2 10161 223 23 16 chr2 59733796 59734223 -193522360 - L1PA15 LINE L1 -3335 3481 3058 1505 179 47 0 chr2 59734223 59734502 -193522081 - AluJb SINE Alu -20 292 1 10161 223 23 16 chr2 59734502 59735380 -193521203 - L1PA15 LINE L1 -3758 3058 2158 493 130 13 0 chr2 59735382 59735459 -193521124 - LTR3 LTR ERVK -350 82 5 533 336 35 17 chr2 59735463 59735695 -193520888 - L1PA15 LINE L1 -5340 1447 1212 3024 222 11 17 chr2 59735771 59736475 -193520108 - L1PA13 LINE L1 -4648 2139 1440 305 53 0 0 chr2 59736475 59736513 -193520070 - HERVK3 LTR ERVK -7205 38 1 2105 180 43 14 chr2 59736520 59736936 -193519647 - LTR3 LTR ERVK 0 432 5 483 315 60 26 chr2 59736940 59737172 -193519411 - L1PA13 LINE L1 -5340 1447 1208 2524 291 16 27 chr2 59737179 59737911 -193518672 - L1PA13 LINE L1 -6063 724 1 2402 183 42 0 chr2 59737924 59738371 -193518212 + Tigger3b DNA MER2_type 766 1231 0 548 247 95 100 chr2 59738662 59739177 -193517406 - L1ME1 LINE L1 -4544 2063 1352 2482 286 95 15 chr2 59739183 59740276 -193516307 - L1ME1 LINE L1 -5169 1438 258 29 28 0 0 chr2 59740496 59740532 -193516051 + AT_rich Low_complexity Low_complexity 1 36 0 27 29 0 0 chr2 59740578 59740612 -193515971 + AT_rich Low_complexity Low_complexity 1 34 0 2193 181 26 40 chr2 59741347 59741409 -193515174 - MSTB LTR MaLR -2 424 363 10450 113 14 53 chr2 59741409 59743095 -193513488 + L1PA7 LINE L1 3785 5415 -739 2032 100 0 0 chr2 59743095 59743355 -193513228 + AluSq SINE Alu 1 260 -53 10450 113 14 53 chr2 59743355 59744067 -193512516 + L1PA7 LINE L1 5415 6154 0 2193 181 26 40 chr2 59744067 59744434 -193512149 - MSTB LTR MaLR -63 363 1 459 0 0 0 chr2 59744571 59744622 -193511961 + (TA)n Simple_repeat Simple_repeat 2 52 0 21 0 0 0 chr2 59744831 59744852 -193511731 + AT_rich Low_complexity Low_complexity 1 21 0 227 270 0 0 chr2 59745744 59745807 -193510776 + L1ME3 LINE L1 6067 6129 -33 21 57 0 0 chr2 59745816 59745851 -193510732 + AT_rich Low_complexity Low_complexity 1 35 0 1444 192 52 79 chr2 59746090 59746471 -193510112 - MLT1C LTR MaLR -50 417 47 30 59 0 0 chr2 59746539 59746590 -193509993 + AT_rich Low_complexity Low_complexity 1 51 0 24 91 0 0 chr2 59747928 59747994 -193508589 + AT_rich Low_complexity Low_complexity 1 66 0 9493 232 38 34 chr2 59749279 59752126 -193504457 + L1PA13 LINE L1 1 2868 -3929 677 159 19 0 chr2 59752136 59752243 -193504340 + L1PA15 LINE L1 1 109 -6678 8984 184 18 50 chr2 59752248 59754571 -193502012 + L1PA15 LINE L1 3900 6143 -669 2182 103 3 0 chr2 59754571 59754862 -193501721 + AluSg SINE Alu 14 305 -5 2330 139 11 0 chr2 59754868 59755241 -193501342 + L1PA15 LINE L1 6433 6809 -7 643 326 76 0 chr2 59755980 59756216 -193500367 + MIR SINE MIR 2 255 -7 545 12 49 0 chr2 59756721 59756803 -193499780 + (TA)n Simple_repeat Simple_repeat 2 87 0 364 320 100 27 chr2 59757456 59757787 -193498796 - L1MC4 LINE L1 -125 7917 7563 234 128 0 0 chr2 59758954 59758993 -193497590 + (TA)n Simple_repeat Simple_repeat 1 39 0 21 0 0 0 chr2 59759584 59759605 -193496978 + AT_rich Low_complexity Low_complexity 1 21 0 23 78 0 0 chr2 59760035 59760086 -193496497 + AT_rich Low_complexity Low_complexity 1 51 0 21 0 0 0 chr2 59760144 59760165 -193496418 + AT_rich Low_complexity Low_complexity 1 21 0 1530 250 21 45 chr2 59760277 59760443 -193496140 + MER89 LTR ERV1 4 172 -387 2365 49 3 0 chr2 59760443 59760731 -193495852 + AluY SINE Alu 1 289 -22 1530 250 21 45 chr2 59760731 59761036 -193495547 + MER89 LTR ERV1 172 464 -95 4469 192 33 14 chr2 59761037 59761916 -193494667 + MSTA-int LTR MaLR 749 1644 -7 2298 173 22 12 chr2 59761930 59762347 -193494236 + MSTA LTR MaLR 8 428 0 411 125 0 0 chr2 59762347 59762404 -193494179 + MER89 LTR ERV1 503 559 0 21 0 0 0 chr2 59762906 59762927 -193493656 + AT_rich Low_complexity Low_complexity 1 21 0 2273 108 10 0 chr2 59762983 59763289 -193493294 - AluSp SINE Alu -4 309 1 249 94 78 31 chr2 59764113 59764177 -193492406 + T-rich Low_complexity Low_complexity 5 71 0 2358 170 111 39 chr2 59764516 59764668 -193491915 - L1MA9 LINE L1 -1 6311 6171 279 0 0 0 chr2 59764668 59764699 -193491884 + (TG)n Simple_repeat Simple_repeat 2 32 0 2358 170 111 39 chr2 59764699 59765170 -193491413 - L1MA9 LINE L1 -141 6171 5643 301 183 161 21 chr2 59765246 59765339 -193491244 + L1 LINE L1 3936 4041 -2105 1991 207 9 20 chr2 59765374 59766165 -193490418 - L1MA9 LINE L1 -678 5634 4850 3439 174 28 90 chr2 59766174 59767112 -193489471 + L1 LINE L1 3936 4815 -1331 9265 36 2 4 chr2 59767875 59769784 -193486799 - L1PA4 LINE L1 0 6155 4241 456 293 13 38 chr2 59771719 59771876 -193484707 + MER5B DNA MER1_type 1 153 -25 256 214 29 14 chr2 59771876 59771946 -193484637 + (TAGA)n Simple_repeat Simple_repeat 2 72 0 24 67 0 0 chr2 59773450 59773495 -193483088 + AT_rich Low_complexity Low_complexity 1 45 0 861 128 0 0 chr2 59773633 59773758 -193482825 + AluSg/x SINE Alu 186 310 0 22 0 0 0 chr2 59775364 59775386 -193481197 + AT_rich Low_complexity Low_complexity 1 22 0 286 319 26 35 chr2 59776032 59776148 -193480435 - MIR SINE MIR -146 116 2 318 26 0 0 chr2 59777299 59777338 -193479245 + (CA)n Simple_repeat Simple_repeat 2 40 0 2193 104 16 0 chr2 59777431 59777738 -193478845 + AluSp SINE Alu 2 313 0 1208 288 104 11 chr2 59777871 59778323 -193478260 - LTR33 LTR ERVL -2 519 26 1044 248 55 25 chr2 59778345 59778683 -193477900 - MLT1E2 LTR MaLR -7 619 217 4687 239 27 19 chr2 59778685 59780075 -193476508 - L1M4 LINE L1 -1390 5254 3853 260 213 16 0 chr2 59780069 59780130 -193476453 - L1M4 LINE L1 -5252 1394 1333 * 998 203 30 0 chr2 59780130 59780332 -193476251 + MER2 DNA MER2_type 1 208 -137 466 214 35 40 chr2 59780445 59780618 -193475965 - L1M4 LINE L1 -5202 1340 1169 381 176 0 0 chr2 59780627 59780701 -193475882 + L1MA9 LINE L1 6086 6159 -153 528 233 35 120 chr2 59780757 59781074 -193475509 - L1M4 LINE L1 -5666 876 587 22 35 0 0 chr2 59781471 59781500 -193475083 + AT_rich Low_complexity Low_complexity 1 29 0 1104 233 17 17 chr2 59781560 59781852 -193474731 - L1 LINE L1 -2059 4087 3796 269 350 134 49 chr2 59782025 59782554 -193474029 + L2 LINE L2 933 1506 -1808 255 335 102 51 chr2 59782666 59782818 -193473765 - MER63A DNA MER1_type -1481 207 41 222 91 0 0 chr2 59782818 59782851 -193473732 + (TA)n Simple_repeat Simple_repeat 1 33 0 255 335 102 51 chr2 59782851 59782895 -193473688 - MER63A DNA MER1_type -1647 41 1 403 261 116 10 chr2 59783180 59783379 -193473204 + L1ME LINE L1 5575 5794 -327 2129 124 0 0 chr2 59784732 59785039 -193471544 + AluSc SINE Alu 1 307 -2 322 123 231 0 chr2 59785628 59785693 -193470890 - MADE1 DNA Mariner 0 80 1 180 206 68 41 chr2 59785913 59785986 -193470597 - MER5C DNA MER1_type -28 296 222 1150 168 40 47 chr2 59787070 59787392 -193469191 + MER33 DNA MER1_type 5 324 0 4036 228 47 5 chr2 59787446 59788485 -193468098 + Tigger6a DNA MER2_type 1 1083 0 5519 107 0 30 chr2 59788914 59789772 -193466811 - L1PA7 LINE L1 -3404 2742 1911 17892 94 15 0 chr2 59789772 59793137 -193463446 + L1PA7 LINE L1 2768 6152 -2 192 341 37 12 chr2 59793546 59793628 -193462955 - MIR SINE MIR -97 165 82 491 270 68 49 chr2 59793726 59793989 -193462594 + LTR16B LTR ERVL 138 405 -59 239 287 42 60 chr2 59794200 59794367 -193462216 - LTR33A LTR ERVL -347 176 13 348 284 0 0 chr2 59795315 59795389 -193461194 + MER21B LTR ERV1 21 94 -769 3016 249 47 17 chr2 59795390 59796137 -193460446 + MER21B LTR ERV1 48 816 -47 383 329 60 86 chr2 59796496 59797042 -193459541 - L2 LINE L2 -18 3295 2758 209 371 103 0 chr2 59798993 59799090 -193457493 + L2 LINE L2 1841 1947 -1367 26 0 0 0 chr2 59799829 59799855 -193456728 + AT_rich Low_complexity Low_complexity 1 26 0 200 224 0 20 chr2 59800592 59800641 -193455942 + GA-rich Low_complexity Low_complexity 2 49 0 22 56 0 0 chr2 59800683 59800719 -193455864 + AT_rich Low_complexity Low_complexity 1 36 0 1477 241 43 12 chr2 59800940 59801499 -193455084 + L1M3c LINE L1 955 1794 -4519 407 286 138 80 chr2 59802817 59803355 -193453228 + L3 LINE CR1 996 1564 -13 223 258 65 16 chr2 59803502 59803564 -193453019 - L2 LINE L2 -1 3312 3248 462 191 11 0 chr2 59804018 59804112 -193452471 - Tigger1 DNA MER2_type -1672 746 652 1422 147 123 28 chr2 59804112 59804469 -193452114 + MSTA LTR MaLR 2 428 0 1354 185 21 0 chr2 59804469 59804704 -193451879 - Tigger1 DNA MER2_type -1761 657 418 623 224 0 0 chr2 59804821 59804937 -193451646 - Tigger1 DNA MER2_type -2302 116 1 2037 183 59 7 chr2 59806324 59806729 -193449854 - MSTA LTR MaLR -2 426 1 745 315 82 43 chr2 59807532 59808021 -193448562 + L2 LINE L2 2804 3311 -2 744 311 69 36 chr2 59811309 59811614 -193444969 - L3 LINE CR1 -2 1575 1261 189 0 0 0 chr2 59811817 59811838 -193444745 + (A)n Simple_repeat Simple_repeat 1 21 0 2384 151 42 2 chr2 59811871 59812281 -193444302 - MSTA LTR MaLR 0 428 3 797 222 61 28 chr2 59812532 59812744 -193443839 + MER20 DNA MER1_type 1 219 0 2954 109 6 34 chr2 59812853 59813331 -193443252 - MER4C LTR ERV1 0 465 1 1943 206 22 17 chr2 59813541 59813953 -193442630 - MLT2D LTR ERVL 0 414 1 1376 194 127 58 chr2 59814416 59814895 -193441688 + MER67D LTR ERV1 3 514 0 504 99 0 0 chr2 59815548 59815619 -193440964 - L1MA2 LINE L1 -8 6296 6226 14413 186 38 9 chr2 59815636 59819311 -193437272 - L1M1 LINE L1 -743 6822 3174 22 80 0 0 chr2 59819357 59819407 -193437176 + AT_rich Low_complexity Low_complexity 1 50 0 24 32 0 0 chr2 59819874 59819905 -193436678 + AT_rich Low_complexity Low_complexity 1 31 0 2354 245 41 29 chr2 59821596 59822281 -193434302 - L1MC4a LINE L1 -4 7804 7112 2193 119 0 3 chr2 59822637 59822947 -193433636 - AluSc SINE Alu 0 309 1 28 29 0 0 chr2 59822970 59823005 -193433578 + AT_rich Low_complexity Low_complexity 1 35 0 14596 199 15 13 chr2 59823005 59825897 -193430686 - L1PA14 LINE L1 -13 6148 3240 1987 170 3 18 chr2 59825897 59826239 -193430344 - MER1B DNA MER1_type 0 337 1 14596 199 15 13 chr2 59826239 59827521 -193429062 - L1PA14 LINE L1 -2921 3240 1962 1969 253 69 24 chr2 59827601 59828502 -193428081 - L1ME2 LINE L1 -35 6129 5202 22 35 0 0 chr2 59828512 59828541 -193428042 + AT_rich Low_complexity Low_complexity 1 29 0 771 204 24 88 chr2 59828728 59828978 -193427605 - MLT1D LTR MaLR -270 235 2 1563 175 6 57 chr2 59829729 59830060 -193426523 + LTR10B LTR ERV1 192 505 0 1563 305 101 25 chr2 59830207 59830961 -193425622 - L2 LINE L2 -742 2572 1762 1762 247 85 45 chr2 59830962 59831613 -193424970 + MLT1E1 LTR MaLR 1 542 0 352 270 100 0 chr2 59831727 59831827 -193424756 - L2 LINE L2 -1743 1571 1462 516 276 47 1 chr2 59831831 59832024 -193424559 - L1ME LINE L1 -331 5773 5575 260 172 35 0 chr2 59832084 59832142 -193424441 - L1MC4 LINE L1 -1342 6700 6641 389 315 26 48 chr2 59832634 59832774 -193423809 - L1ME LINE L1 -2986 3143 3010 9064 98 3 25 chr2 59832774 59834932 -193421651 - L1PA8 LINE L1 -13 6159 4033 389 315 26 48 chr2 59834932 59835064 -193421519 - L1ME LINE L1 -3119 3010 2877 483 263 74 77 chr2 59835067 59835488 -193421095 + MLT1F LTR MaLR 1 415 -178 303 276 71 47 chr2 59835537 59835664 -193420919 - L1ME LINE L1 -5019 1100 971 2319 123 31 14 chr2 59836441 59836798 -193419785 + THE1B LTR MaLR 1 363 -1 203 138 0 0 chr2 59837116 59837145 -193419438 + (CA)n Simple_repeat Simple_repeat 2 30 0 691 200 0 0 chr2 59837774 59837904 -193418679 - MLT1C LTR MaLR -2 465 336 1023 233 84 32 chr2 59837961 59838270 -193418313 - MLT1C LTR MaLR -134 333 9 2046 132 3 3 chr2 59838919 59839214 -193417369 - AluSx SINE Alu -15 297 3 574 356 35 9 chr2 59839826 59840056 -193416527 - MIR SINE MIR 0 262 27 22 70 0 0 chr2 59840568 59840611 -193415972 + AT_rich Low_complexity Low_complexity 1 43 0 1100 213 71 5 chr2 59840661 59840946 -193415637 - L1ME3A LINE L1 -72 6098 5790 23 86 0 0 chr2 59840959 59841017 -193415566 + AT_rich Low_complexity Low_complexity 1 58 0 1557 243 98 11 chr2 59843800 59844278 -193412305 - MLT2B1 LTR ERVL 0 520 1 4568 229 57 22 chr2 59845096 59850636 -193405947 + L1MA8 LINE L1 1492 7312 0 276 77 0 0 chr2 59851266 59851305 -193405278 + (TG)n Simple_repeat Simple_repeat 2 40 0 2544 81 8 11 chr2 59851323 59851693 -193404890 - L1PA8 LINE L1 -1 6171 5803 2029 156 46 7 chr2 59852553 59852964 -193403619 + Tigger2 DNA MER2_type 1 427 -2291 11905 158 33 9 chr2 59853140 59855180 -193401403 + Tigger2 DNA MER2_type 442 2530 -188 865 215 32 16 chr2 59855180 59855457 -193401126 - LTR22 LTR ERVK 0 458 192 314 94 297 0 chr2 59855449 59855513 -193401070 + Tigger2 DNA MER2_type 950 1032 -1686 * 9122 103 24 3 chr2 59855513 59856799 -193399784 - HERVK22 LTR ERVK -983 5854 4542 * 15585 88 8 6 chr2 59856796 59858911 -193397672 - HERVK22 LTR ERVK -2403 4434 2314 4725 127 63 4 chr2 59858894 59859644 -193396939 - HERVK22 LTR ERVK -6043 794 1 * 1863 201 103 15 chr2 59859645 59860112 -193396471 - LTR22 LTR ERVK -1 508 1 936 175 26 11 chr2 59860113 59860302 -193396281 + Tigger2 DNA MER2_type 2526 2717 -1 561 245 7 26 chr2 59860399 59860550 -193396033 + LTR52 LTR ERVL 2 149 -272 195 114 0 0 chr2 59860597 59860632 -193395951 + (A)n Simple_repeat Simple_repeat 1 35 0 679 229 53 12 chr2 59860659 59860829 -193395754 + LTR52 LTR ERVL 228 404 -17 291 333 145 19 chr2 59861019 59861226 -193395357 + MIR SINE MIR 24 256 -6 192 97 0 0 chr2 59861536 59861567 -193395016 + (ATG)n Simple_repeat Simple_repeat 2 32 0 418 348 94 0 chr2 59861573 59861774 -193394809 - MIR SINE MIR 0 262 43 957 71 0 0 chr2 59863312 59863438 -193393145 - AluSg/x SINE Alu -4 308 183 1494 112 52 21 chr2 59863439 59863568 -193393015 - AluSg SINE Alu -70 240 99 443 0 0 0 chr2 59863568 59863620 -193392963 - L1PA3 LINE L1 -3 6152 6101 1494 112 52 21 chr2 59863620 59863723 -193392860 - AluSg SINE Alu -211 99 1 3857 161 20 12 chr2 59863935 59864679 -193391904 - L1MA4 LINE L1 -8 6292 5543 2385 92 0 6 chr2 59865176 59865490 -193391093 - AluSx SINE Alu 0 312 1 678 203 61 61 chr2 59867347 59867593 -193388990 - L1MB8 LINE L1 -1 6177 5932 2747 26 0 0 chr2 59867594 59867905 -193388678 - AluYa5 SINE Alu 0 311 1 2377 277 56 6 chr2 59867923 59868911 -193387672 - L1M4 LINE L1 -2629 3517 2481 215 164 60 0 chr2 59869037 59869104 -193387479 + (TA)n Simple_repeat Simple_repeat 2 72 0 410 111 14 0 chr2 59869122 59869194 -193387389 - L1PA13 LINE L1 -5 6158 6086 11389 184 13 26 chr2 59869197 59870668 -193385915 - L1PA12 LINE L1 -3175 4409 2920 1863 179 38 0 chr2 59870668 59871014 -193385569 + THE1B LTR MaLR 2 360 -4 11389 184 13 26 chr2 59871014 59872768 -193383815 - L1PA12 LINE L1 -4664 2920 1214 1732 131 20 20 chr2 59872782 59873079 -193383504 - THE1C LTR MaLR -78 297 1 9762 127 29 19 chr2 59873079 59874183 -193382400 - THE1C-int LTR MaLR 0 1580 455 2009 164 3 0 chr2 59874183 59874493 -193382090 + AluSx SINE Alu 2 312 0 9762 127 29 19 chr2 59874493 59874950 -193381633 - THE1C-int LTR MaLR -1125 455 4 2007 125 14 14 chr2 59874967 59875264 -193381319 - THE1C LTR MaLR -78 297 1 3683 168 3 69 chr2 59875264 59875990 -193380593 - L1PA12 LINE L1 -6903 678 1 468 294 65 11 chr2 59876293 59876477 -193380106 + MER58A DNA MER1_type 1 194 -30 1830 136 136 9 chr2 59876478 59876810 -193379773 - THE1C LTR MaLR 0 375 2 243 0 0 0 chr2 59877909 59877936 -193378647 + (TA)n Simple_repeat Simple_repeat 2 28 0 2358 55 7 0 chr2 59877937 59878229 -193378354 - AluY SINE Alu -17 294 1 2080 121 7 3 chr2 59878733 59879039 -193377544 - AluSq SINE Alu -6 307 1 390 173 19 69 chr2 59881213 59881590 -193374993 + (TATATG)n Simple_repeat Simple_repeat 1 357 0 293 156 42 0 chr2 59881613 59881709 -193374874 + (TA)n Simple_repeat Simple_repeat 1 100 0 1361 208 23 63 chr2 59881720 59882115 -193374468 + L1MA6 LINE L1 2641 3019 -3127 * 7014 199 37 6 chr2 59882112 59884538 -193372045 + L1MA6 LINE L1 3791 6295 -5 651 276 18 12 chr2 59884662 59884825 -193371758 + MER82 DNA MER2_type 469 632 -21 412 258 86 32 chr2 59884973 59885012 -193371571 + L1MC1 LINE L1 4130 4165 -1981 892 125 12 0 chr2 59885012 59885172 -193371411 + (TA)n Simple_repeat Simple_repeat 2 163 0 412 258 86 32 chr2 59885172 59885318 -193371265 + L1MC1 LINE L1 4165 4325 -1821 339 85 0 0 chr2 59885371 59885418 -193371165 + (CA)n Simple_repeat Simple_repeat 2 48 0 2142 260 26 10 chr2 59885457 59885957 -193370626 - MLT2B3 LTR ERVL -46 508 1 2978 252 34 8 chr2 59885962 59887033 -193369550 + L1MC1 LINE L1 4346 5444 -756 1853 171 131 8 chr2 59887033 59887414 -193369169 + MSTA LTR MaLR 1 428 0 7977 205 28 15 chr2 59887414 59889039 -193367544 + MSTA-int LTR MaLR 1 1646 -5 2318 131 83 8 chr2 59889048 59889446 -193367137 + MSTA LTR MaLR 1 428 0 3016 195 42 22 chr2 59889446 59889837 -193366746 + L1MC1 LINE L1 5440 5853 -480 2131 139 0 0 chr2 59889837 59890139 -193366444 + AluSg SINE Alu 1 302 -8 3016 195 42 22 chr2 59890139 59890461 -193366122 + L1MC1 LINE L1 5853 6167 -166 1920 175 47 10 chr2 59890575 59890980 -193365603 + L1MC1 LINE L1 5914 6333 0 24 53 0 0 chr2 59891085 59891123 -193365460 + AT_rich Low_complexity Low_complexity 1 38 0 436 260 0 0 chr2 59891123 59891223 -193365360 - U13 snRNA snRNA 0 104 5 9917 31 1 0 chr2 59891566 59893521 -193363062 - L1PA3 LINE L1 -3 6152 4196 8450 33 0 1 chr2 59893521 59894540 -193362043 + L1PA3 LINE L1 3187 4204 -1942 42 0 0 0 chr2 59894616 59894658 -193361925 + AT_rich Low_complexity Low_complexity 1 42 0 4505 162 22 53 chr2 59894967 59895441 -193361142 - L1PA16 LINE L1 -3 6163 5676 252 86 0 0 chr2 59895441 59895476 -193361107 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 4505 162 22 53 chr2 59895476 59895560 -193361023 - L1PA16 LINE L1 -490 5676 5591 270 116 0 0 chr2 59895560 59895603 -193360980 + (CA)n Simple_repeat Simple_repeat 2 44 0 4505 162 22 53 chr2 59895603 59895982 -193360601 - L1PA16 LINE L1 -575 5591 5254 968 220 26 11 chr2 59895997 59896316 -193360267 - L1 LINE L1 -2602 3544 3211 4250 70 9 4 chr2 59896317 59896877 -193359706 - L1PA6 LINE L1 0 6154 5592 1536 184 40 3 chr2 59896885 59897189 -193359394 + L1PA15-16 LINE L1 845 1159 -5690 1695 210 44 44 chr2 59897279 59897688 -193358895 + LTR2 LTR ERV1 41 449 0 1725 164 13 3 chr2 59897688 59897993 -193358590 + L1PA15-16 LINE L1 1158 1465 -5384 16655 207 23 12 chr2 59897993 59898019 -193358564 - L1PA15-16 LINE L1 -2924 3925 3901 2084 129 3 0 chr2 59898019 59898321 -193358262 + AluSc SINE Alu 1 303 -6 16655 207 23 12 chr2 59898321 59899822 -193356761 - L1PA15-16 LINE L1 -2948 3901 2417 2262 127 37 8 chr2 59899822 59900176 -193356407 - THE1B LTR MaLR 0 364 1 11049 116 11 0 chr2 59900176 59901739 -193354844 - THE1B-int LTR MaLR 0 1580 1 2361 125 37 6 chr2 59901739 59902092 -193354491 - THE1B LTR MaLR 0 364 1 16655 207 23 12 chr2 59902092 59904431 -193352152 - L1PA15-16 LINE L1 -4431 2418 1 1464 191 0 50 chr2 59904579 59904882 -193351701 + AluJo SINE Alu 13 300 -12 998 204 77 80 chr2 59905192 59905554 -193351029 + MLT1A2 LTR MaLR 1 361 -13 24 32 0 0 chr2 59907011 59907042 -193349541 + AT_rich Low_complexity Low_complexity 1 31 0 348 123 14 27 chr2 59907778 59907851 -193348732 - L1MA4 LINE L1 -1 6299 6228 695 249 98 67 chr2 59908076 59908192 -193348391 + MER97a DNA MER1_type? 11 122 -772 5680 71 3 0 chr2 59908192 59908928 -193347655 - L1PA7 LINE L1 -4 6150 5413 695 249 98 67 chr2 59908928 59909200 -193347383 + MER97a DNA MER1_type? 122 411 -483 29 28 0 0 chr2 59909309 59909345 -193347238 + AT_rich Low_complexity Low_complexity 1 36 0 1109 203 29 4 chr2 59909457 59909738 -193346845 - L1 LINE L1 -743 5403 5116 1103 239 15 0 chr2 59909740 59910008 -193346575 - L1PA13 LINE L1 -3714 3083 2812 959 233 9 0 chr2 59910008 59910240 -193346343 + L1PA15-16 LINE L1 2630 2863 -3986 2629 237 17 23 chr2 59910256 59910914 -193345669 - L1PA13 LINE L1 -4874 1913 1260 667 299 78 54 chr2 59910914 59911248 -193345335 - L1PA13 LINE L1 -6002 785 444 792 166 124 18 chr2 59911248 59911417 -193345166 - HUERS-P2 LTR ERV1 -2104 984 798 2842 175 19 2 chr2 59911419 59911980 -193344603 - L1P4 LINE L1 -380 5786 5217 225 313 54 0 chr2 59911979 59912091 -193344492 + L1P LINE L1 5021 5138 -1008 * 5759 222 42 22 chr2 59912103 59912272 -193344311 - L1 LINE L1 -2640 3688 3524 2160 134 0 0 chr2 59912272 59912570 -193344013 - AluSc SINE Alu -11 298 1 5759 222 42 22 chr2 59912570 59914947 -193341636 - L1 LINE L1 -2804 3524 1196 2069 113 3 22 chr2 59914947 59915265 -193341318 - AluSx SINE Alu 0 312 1 5759 222 42 22 chr2 59915265 59915581 -193341002 - L1 LINE L1 -5132 1196 888 2222 79 7 0 chr2 59915581 59915859 -193340724 - AluY SINE Alu -13 298 19 5759 222 42 22 chr2 59915859 59916597 -193339986 - L1 LINE L1 -5440 888 6 1313 241 30 18 chr2 59916608 59917043 -193339540 - L1 LINE L1 -2365 3781 3342 5033 157 11 2 chr2 59917043 59918590 -193337993 + L1PA13 LINE L1 4610 6161 -2 25 83 0 0 chr2 59918708 59918768 -193337815 + AT_rich Low_complexity Low_complexity 1 60 0 234 322 58 58 chr2 59919596 59919717 -193336866 + L2 LINE L2 3151 3271 -1 714 261 37 14 chr2 59920157 59920375 -193336208 + MER58A DNA MER1_type 2 224 0 313 298 32 32 chr2 59921619 59921743 -193334840 - MIR3 SINE MIR 0 208 85 736 234 107 5 chr2 59922431 59922628 -193333955 - MER20 DNA MER1_type -1 218 2 33 0 0 0 chr2 59922681 59922714 -193333869 + AT_rich Low_complexity Low_complexity 1 33 0 2026 192 15 0 chr2 59922728 59923119 -193333464 - L1PA16 LINE L1 -1 6165 5769 2700 148 25 16 chr2 59924531 59925018 -193331565 - L1PA16 LINE L1 -388 5778 5288 2084 180 16 3 chr2 59925019 59925403 -193331180 - L1PA15 LINE L1 -1 6164 5776 245 205 0 51 chr2 59925403 59925481 -193331102 + L1MC4 LINE L1 6628 6701 -1341 * 482 202 0 0 chr2 59925472 59925566 -193331017 - L1PA15 LINE L1 -374 5791 5698 280 111 0 0 chr2 59925573 59925618 -193330965 - L1 LINE L1 -914 5232 5188 181 198 77 77 chr2 59926789 59926880 -193329703 - L2 LINE L2 -528 2786 2696 405 225 72 36 chr2 59927239 59927377 -193329206 + MIR SINE MIR 120 262 0 372 345 191 5 chr2 59927961 59928170 -193328413 + MIR SINE MIR 5 252 -10 21 89 0 0 chr2 59929244 59929300 -193327283 + AT_rich Low_complexity Low_complexity 1 56 0 282 237 0 0 chr2 59929658 59929734 -193326849 + (TA)n Simple_repeat Simple_repeat 2 77 0 14497 173 48 15 chr2 59929948 59932670 -193323913 - L1MA2 LINE L1 0 7723 5091 1860 135 13 36 chr2 59932670 59932974 -193323609 + AluSx SINE Alu 1 297 -15 14497 173 48 15 chr2 59932974 59937019 -193319564 - L1MA2 LINE L1 -2632 5091 710 992 214 28 14 chr2 59937039 59937254 -193319329 - L1MA2 LINE L1 -7334 231 14 1407 274 96 38 chr2 59937422 59937923 -193318660 + MLT1F LTR MaLR 6 535 -7 240 319 67 37 chr2 59938196 59938331 -193318252 + L2 LINE L2 3172 3310 -3 294 0 0 0 chr2 59938466 59938534 -193318049 + L1PA3 LINE L1 6105 6162 0 21 57 0 0 chr2 59939109 59939144 -193317439 + AT_rich Low_complexity Low_complexity 1 35 0 271 363 56 12 chr2 59940220 59940380 -193316203 + L2 LINE L2 2222 2388 -926 4395 101 2 0 chr2 59940492 59941113 -193315470 - L1P LINE L1 -1681 4465 3844 549 220 73 18 chr2 59941148 59941366 -193315217 + Charlie2 DNA MER1_type 2268 2497 -365 799 219 80 11 chr2 59941388 59941575 -193315008 - LTR69 LTR ERVL 0 588 389 9646 47 8 2 chr2 59941575 59942797 -193313786 - L1P LINE L1 -1774 4372 3144 3695 56 8 2 chr2 59942789 59943273 -193313310 - L1P LINE L1 -4111 2035 1549 * 4638 60 13 2 chr2 59943270 59943888 -193312695 + L1P LINE L1 4388 5012 -1134 248 265 265 0 chr2 59944631 59944729 -193311854 + L2 LINE L2 3182 3305 -8 25 31 0 0 chr2 59946851 59946883 -193309700 + AT_rich Low_complexity Low_complexity 1 32 0 2111 193 18 23 chr2 59947288 59947723 -193308860 + Tigger2a DNA MER2_type 2 434 0 333 342 76 0 chr2 59948582 59948886 -193307697 - L1M4 LINE L1 -2399 3747 3421 338 343 19 0 chr2 59949306 59949414 -193307169 + MER5B DNA MER1_type 69 178 0 256 302 24 71 chr2 59949551 59949677 -193306906 - L2 LINE L2 -21 3292 3173 375 293 71 129 chr2 59949968 59950106 -193306477 - L2 LINE L2 -621 2693 2549 2000 188 43 5 chr2 59950106 59950520 -193306063 - MSTB1 LTR MaLR 0 432 3 375 293 71 129 chr2 59950520 59950768 -193305815 - L2 LINE L2 -765 2549 2349 1526 86 5 0 chr2 59950768 59950990 -193305593 - AluY SINE Alu 0 308 86 375 293 71 129 chr2 59950990 59951192 -193305391 - L2 LINE L2 -965 2349 2137 384 22 0 0 chr2 59951725 59951770 -193304813 + (CA)n Simple_repeat Simple_repeat 2 46 0 1101 177 102 78 chr2 59954136 59954497 -193302086 + THE1C LTR MaLR 1 370 -5 915 169 111 10 chr2 59955925 59956132 -193300451 - L1MDa LINE L1 -4179 2361 2134 438 160 0 152 chr2 59956132 59956257 -193300326 - Tigger7 DNA MER2_type 0 2491 2386 1067 251 13 4 chr2 59956270 59956497 -193300086 - Tigger7 DNA MER2_type -2257 230 2 381 157 14 14 chr2 59956524 59956594 -193299989 + Tigger5 DNA MER2_type 2254 2323 0 589 151 0 0 chr2 59956648 59956734 -193299849 + Tigger5 DNA MER2_type 2238 2323 0 278 168 131 47 chr2 59956734 59956841 -193299742 - L1MDa LINE L1 -4405 2135 2020 27 0 0 0 chr2 59956844 59956871 -193299712 + AT_rich Low_complexity Low_complexity 1 27 0 3634 212 117 28 chr2 59956871 59958078 -193298505 - L1MDa LINE L1 -4500 2040 383 294 29 0 0 chr2 59958078 59958113 -193298470 + (TTG)n Simple_repeat Simple_repeat 2 36 0 3634 212 117 28 chr2 59958113 59958206 -193298377 - L1MDa LINE L1 -6157 383 300 261 0 0 0 chr2 59958273 59958302 -193298281 + (TG)n Simple_repeat Simple_repeat 1 29 0 229 349 0 12 chr2 59958306 59958389 -193298194 - L1MDa LINE L1 -6271 269 188 6643 193 105 40 chr2 59958389 59959985 -193296598 - MER52A LTR ERV1 0 1755 56 756 222 49 16 chr2 59960401 59960586 -193295997 - L1MDa LINE L1 -6349 191 1 264 260 137 34 chr2 59960579 59960725 -193295858 - L1ME LINE L1 -351 5815 5655 * 1623 138 6 63 chr2 59960726 59961045 -193295538 - MER50 LTR ERV1 0 734 434 1199 142 36 18 chr2 59961034 59961253 -193295330 - MER50 LTR ERV1 -500 234 12 * 414 285 28 42 chr2 59961258 59961472 -193295111 - L1ME LINE L1 -508 5658 5448 6004 212 110 41 chr2 59961957 59964265 -193292318 - L1MA3 LINE L1 -3 7721 5202 1355 51 11 0 chr2 59964265 59964442 -193292141 - L1PA4 LINE L1 0 6155 5977 6004 212 110 41 chr2 59964442 59964628 -193291955 - L1MA3 LINE L1 -2522 5202 5030 22 56 0 0 chr2 59965054 59965090 -193291493 + AT_rich Low_complexity Low_complexity 1 36 0 1960 151 0 0 chr2 59965198 59965497 -193291086 - AluSx SINE Alu -11 301 3 330 329 39 62 chr2 59965690 59966027 -193290556 - HAL1 LINE L1 -1095 1412 1084 194 342 26 13 chr2 59966229 59966305 -193290278 - L2 LINE L2 -313 3000 2924 2125 31 0 12 chr2 59966755 59967013 -193289570 - AluY SINE Alu -7 304 50 43 35 0 0 chr2 59967150 59967207 -193289376 + AT_rich Low_complexity Low_complexity 1 57 0 7711 202 41 19 chr2 59967210 59968682 -193287901 - L1MA3 LINE L1 -5968 1597 89 300 27 0 0 chr2 59968682 59968719 -193287864 + (TG)n Simple_repeat Simple_repeat 2 38 0 7711 202 41 19 chr2 59968719 59968798 -193287785 - L1MA3 LINE L1 -7476 89 13 1142 242 96 22 chr2 59969369 59969827 -193286756 + L1M3c LINE L1 984 1475 -4666 1520 146 8 4 chr2 59969827 59970073 -193286510 + AluSq SINE Alu 61 307 -6 395 177 177 0 chr2 59970073 59970115 -193286468 + L1MA8 LINE L1 6127 6160 -131 207 0 0 0 chr2 59970115 59970138 -193286445 + (ATGTG)n Simple_repeat Simple_repeat 3 25 0 395 177 177 0 chr2 59970138 59970225 -193286358 + L1MA8 LINE L1 6160 6279 -12 467 347 148 34 chr2 59970678 59971294 -193285289 - L3 LINE CR1 -7 1570 885 4174 26 0 18 chr2 59971539 59972046 -193284537 - L1PA4 LINE L1 -2 6153 5656 3985 45 32 0 chr2 59972046 59972553 -193284030 + L1P LINE L1 4465 4987 -1159 13787 162 33 21 chr2 59972899 59978387 -193278196 - L1MA1 LINE L1 0 7721 2155 5043 178 6 2 chr2 59978386 59979320 -193277263 - L1P LINE L1 -3085 3061 2124 * 414 0 0 0 chr2 59979768 59979814 -193276769 + (TA)n Simple_repeat Simple_repeat 1 46 0 1489 239 85 61 chr2 59980093 59980704 -193275879 + MLT1E2 LTR MaLR 1 626 0 306 65 22 0 chr2 59980799 59980845 -193275738 + MADE1 DNA Mariner 1 47 -33 1726 128 11 117 chr2 59980859 59981217 -193275366 + MER1B DNA MER1_type 1 320 -19 243 200 0 116 chr2 59981213 59981308 -193275275 - Charlie3 DNA MER1_type -2626 84 1 * 318 320 78 25 chr2 59982241 59982522 -193274061 - L1M4 LINE L1 -2977 3169 2874 13016 147 20 2 chr2 59983464 59985600 -193270983 - Tigger1 DNA MER2_type 0 2418 246 453 185 12 0 chr2 59985600 59985681 -193270902 - Tigger1 DNA MER2_type -2336 82 1 * 633 227 0 8 chr2 59985680 59985808 -193270775 - MLT1C LTR MaLR -1 466 340 515 165 28 0 chr2 59985829 59985938 -193270645 - L1MA7 LINE L1 -72 6219 6108 521 146 0 0 chr2 59985954 59986050 -193270533 + L1MA7 LINE L1 6195 6290 -1 1122 238 46 35 chr2 59986079 59986295 -193270288 - MLT1C LTR MaLR -118 349 126 2245 134 50 3 chr2 59986295 59986653 -193269930 + THE1C LTR MaLR 1 375 0 1122 238 46 35 chr2 59986653 59986781 -193269802 - MLT1C LTR MaLR -341 126 1 306 305 61 19 chr2 59986781 59987043 -193269540 - L1M4 LINE L1 -1654 5303 5031 271 266 150 0 chr2 59987482 59987595 -193268988 - L1MEc LINE L1 -5352 1507 1378 250 370 94 0 chr2 59988087 59988290 -193268293 - L1MEc LINE L1 -6066 1072 851 183 42 0 0 chr2 59988803 59988827 -193267756 + (TTA)n Simple_repeat Simple_repeat 1 24 0 26 0 0 0 chr2 59990293 59990319 -193266264 + AT_rich Low_complexity Low_complexity 1 26 0 336 94 0 0 chr2 59990572 59990625 -193265958 + (TC)n Simple_repeat Simple_repeat 2 54 0 2903 6 0 0 chr2 59990665 59990983 -193265600 - AluYb8 SINE Alu 0 318 1 260 128 0 0 chr2 59990998 59991037 -193265546 + MLT1D LTR MaLR 467 505 0 280 103 0 0 chr2 59991080 59991119 -193265464 + MLT1D LTR MaLR 467 505 0 2237 246 39 11 chr2 59991119 59991761 -193264822 + MLT1D-int LTR MaLR 1 660 -711 409 292 8 31 chr2 59991811 59991941 -193264642 + MLT1D-int LTR MaLR 659 785 -586 716 212 18 96 chr2 59991958 59991999 -193264584 + MLT1D LTR MaLR 242 285 -220 1139 100 211 0 chr2 59991999 59992189 -193264394 - MER30 DNA MER1_type 0 230 1 716 212 18 96 chr2 59992189 59992413 -193264170 + MLT1D LTR MaLR 285 505 0 261 346 28 0 chr2 59994259 59994366 -193262217 - MIR SINE MIR -85 177 68 21 0 0 0 chr2 59994987 59995008 -193261575 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr2 59995284 59995307 -193261276 + (TG)n Simple_repeat Simple_repeat 2 24 0 397 218 47 6 chr2 59995327 59995497 -193261086 + (TATATG)n Simple_repeat Simple_repeat 2 178 0 1671 164 75 3 chr2 59995508 59995843 -193260740 + MER46B DNA MER2_type 3 236 0 210 208 0 0 chr2 59995860 59995908 -193260675 + (CATA)n Simple_repeat Simple_repeat 1 48 0 13933 156 21 7 chr2 59996059 59998442 -193258141 - Tigger1 DNA MER2_type 0 2418 2 286 220 44 25 chr2 59998448 59998607 -193257976 + (TATAA)n Simple_repeat Simple_repeat 3 164 0 33 0 0 0 chr2 59998856 59998889 -193257694 + AT_rich Low_complexity Low_complexity 1 33 0 297 0 0 0 chr2 59999640 59999673 -193256910 + (CA)n Simple_repeat Simple_repeat 2 34 0 324 302 82 52 chr2 59999738 59999970 -193256613 - L1ME4a LINE L1 -213 5908 5670 343 216 17 0 chr2 60000503 60000619 -193255964 + (TA)n Simple_repeat Simple_repeat 1 118 0 328 247 72 0 chr2 60001290 60001387 -193255196 + MER112 DNA MER1_type 146 249 -11 5768 177 35 12 chr2 60002904 60004064 -193252519 - L1MC1 LINE L1 -1 6750 5564 2240 129 0 0 chr2 60004064 60004375 -193252208 + AluSx SINE Alu 2 312 0 5768 177 35 12 chr2 60004375 60004476 -193252107 - L1MC1 LINE L1 -1187 5564 5467 2283 278 40 17 chr2 60004476 60006216 -193250367 - L1MC1 LINE L1 -2120 4444 2558 5533 177 20 10 chr2 60006240 60008243 -193248340 - L1PB3 LINE L1 0 6154 4132 937 265 65 40 chr2 60008240 60008993 -193247590 - L1MC1 LINE L1 -4124 2621 1829 * 320 192 0 0 chr2 60009000 60009052 -193247531 - MLT1C LTR MaLR 0 467 416 * 829 181 44 58 chr2 60009049 60009275 -193247308 - MLT1C LTR MaLR -244 223 1 540 249 109 56 chr2 60009300 60009657 -193246926 - L1MC1 LINE L1 -4928 1636 1261 * 698 300 19 36 chr2 60009629 60009936 -193246647 - L1MC1 LINE L1 -5780 265 5 26 30 0 0 chr2 60010382 60010415 -193246168 + AT_rich Low_complexity Low_complexity 1 33 0 221 234 0 0 chr2 60010566 60010613 -193245970 + CT-rich Low_complexity Low_complexity 2 48 0 23 33 0 0 chr2 60011169 60011199 -193245384 + AT_rich Low_complexity Low_complexity 1 30 0 1098 126 75 0 chr2 60011853 60012054 -193244529 - AluSg/x SINE Alu 0 308 95 2232 108 3 0 chr2 60012922 60013229 -193243354 + AluSx SINE Alu 2 309 -3 23 0 0 0 chr2 60013332 60013355 -193243228 + AT_rich Low_complexity Low_complexity 1 23 0 26 30 0 0 chr2 60015129 60015162 -193241421 + AT_rich Low_complexity Low_complexity 1 33 0 1162 245 48 57 chr2 60015565 60015936 -193240647 + MER87 LTR ERV1 174 541 0 398 299 73 2 chr2 60016002 60016164 -193240419 + MLT1E LTR MaLR 19 189 -378 570 207 69 0 chr2 60016726 60016842 -193239741 - FLAM_A SINE Alu -9 124 1 197 400 11 0 chr2 60017027 60017122 -193239461 - MER5A DNA MER1_type -28 161 66 25 0 0 0 chr2 60017277 60017302 -193239281 + AT_rich Low_complexity Low_complexity 1 25 0 1530 178 107 24 chr2 60018627 60018965 -193237618 - MER47A DNA MER2_type 0 366 1 833 323 103 22 chr2 60018995 60019618 -193236965 + HAL1 LINE L1 68 740 -1767 5274 236 76 29 chr2 60019679 60021054 -193235529 + L1M2 LINE L1 3 1441 -5408 23504 162 28 27 chr2 60021315 60022561 -193234022 + L1PA10 LINE L1 10 1254 -5229 189 0 0 0 chr2 60022561 60022582 -193234001 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 23504 162 28 27 chr2 60022582 60024771 -193231812 + L1PA10 LINE L1 1254 3441 -3042 2473 55 7 7 chr2 60024771 60025080 -193231503 + AluY SINE Alu 1 309 -2 23504 162 28 27 chr2 60025080 60028114 -193228469 + L1PA10 LINE L1 3441 6479 -4 24 0 0 0 chr2 60029860 60029884 -193226699 + AT_rich Low_complexity Low_complexity 1 24 0 428 307 98 40 chr2 60029998 60030049 -193226534 + L1MCc LINE L1 3 50 -6373 2096 201 31 2 chr2 60030049 60030463 -193226120 - MSTB LTR MaLR 0 426 1 8387 198 8 13 chr2 60030463 60032122 -193224461 - MSTB-int LTR MaLR 0 1651 1 2293 160 43 26 chr2 60032122 60032541 -193224042 - MSTB LTR MaLR 0 426 1 428 307 98 40 chr2 60032541 60032884 -193223699 + L1MCc LINE L1 49 422 -6001 180 0 0 0 chr2 60033001 60033021 -193223562 + (TTG)n Simple_repeat Simple_repeat 2 21 0 542 244 143 16 chr2 60033425 60033577 -193223006 + L1MCc LINE L1 1101 1232 -5191 198 0 0 0 chr2 60033577 60033599 -193222984 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 542 244 143 16 chr2 60033599 60033704 -193222879 + L1MCc LINE L1 1232 1391 -5032 193 365 14 0 chr2 60035503 60035577 -193221006 - L2 LINE L2 -317 2955 2881 1463 213 82 27 chr2 60035934 60036375 -193220208 - LTR40c LTR ERVL 0 465 1 1798 229 86 50 chr2 60036511 60037171 -193219412 - LTR68 LTR ERV1 0 740 8 236 347 114 20 chr2 60037193 60037438 -193219145 - L2 LINE L2 -13 3300 3033 383 219 21 42 chr2 60037532 60037628 -193218955 + L2 LINE L2 3220 3313 0 188 333 71 12 chr2 60037645 60037729 -193218854 - L2 LINE L2 -244 3028 2940 442 350 131 31 chr2 60037809 60037933 -193218650 - L2 LINE L2 -575 2739 2629 2203 89 3 16 chr2 60037933 60038246 -193218337 + AluSc SINE Alu 1 309 0 442 350 131 31 chr2 60038246 60038938 -193217645 - L2 LINE L2 -685 2629 1841 187 348 26 43 chr2 60040152 60040267 -193216316 - MIR SINE MIR -62 200 88 377 315 34 39 chr2 60040956 60041134 -193215449 - MER5B DNA MER1_type -1 177 1 1428 152 16 0 chr2 60041556 60041812 -193214771 - L1MA5A LINE L1 -4 6293 6034 183 132 44 29 chr2 60042663 60042731 -193213852 + (TCTA)n Simple_repeat Simple_repeat 2 70 0 22 0 0 0 chr2 60042887 60042909 -193213674 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 60043832 60043860 -193212723 + AT_rich Low_complexity Low_complexity 1 28 0 595 255 92 41 chr2 60044053 60044643 -193211940 - Charlie2 DNA MER1_type -342 2520 1856 413 308 8 8 chr2 60044723 60044853 -193211730 - Charlie2 DNA MER1_type -2705 157 28 697 98 8 45 chr2 60044904 60045037 -193211546 + AluSg/x SINE Alu 185 312 0 182 337 86 49 chr2 60046398 60046561 -193210022 + MIR SINE MIR 2 170 -92 224 217 275 0 chr2 60047024 60047093 -193209490 - MER5B DNA MER1_type -89 89 2 5470 169 19 23 chr2 60047190 60047626 -193208957 + L1MA4 LINE L1 4859 5295 -1005 206 0 0 65 chr2 60047626 60047657 -193208926 + (TAA)n Simple_repeat Simple_repeat 2 30 0 5470 169 19 23 chr2 60047657 60048572 -193208011 + L1MA4 LINE L1 5295 6199 -101 2054 131 0 22 chr2 60048572 60048884 -193207699 - AluSx SINE Alu -7 305 1 5470 169 19 23 chr2 60048884 60048981 -193207602 + L1MA4 LINE L1 6199 6295 -5 235 179 51 26 chr2 60048984 60049062 -193207521 + (TATAA)n Simple_repeat Simple_repeat 5 84 0 247 320 80 10 chr2 60049390 60049490 -193207093 + L2 LINE L2 3150 3256 -16 2005 126 7 16 chr2 60051459 60051769 -193204814 - AluSx SINE Alu -5 307 1 688 226 14 97 chr2 60051769 60051986 -193204597 - MER20 DNA MER1_type -20 199 1 23 33 0 0 chr2 60053852 60053882 -193202701 + AT_rich Low_complexity Low_complexity 1 30 0 4040 102 7 13 chr2 60053883 60054498 -193202085 - L1MA2 LINE L1 0 6304 5694 26 0 0 0 chr2 60054928 60054954 -193201629 + AT_rich Low_complexity Low_complexity 1 26 0 1145 321 92 11 chr2 60055147 60055624 -193200959 + Zaphod DNA AcHobo 1 516 -3515 1977 219 60 70 chr2 60055639 60056493 -193200090 + Zaphod DNA AcHobo 2730 3574 -457 755 237 29 2 chr2 60056504 60056695 -193199888 + L1ME1 LINE L1 5980 6332 -2 621 260 108 10 chr2 60056770 60057058 -193199525 + Zaphod DNA AcHobo 3577 3892 -139 1503 196 20 68 chr2 60057126 60057523 -193199060 - L1MA10 LINE L1 -50 6284 5907 447 206 114 15 chr2 60057523 60057654 -193198929 + Zaphod DNA AcHobo 3888 4031 0 205 325 83 47 chr2 60057694 60057863 -193198720 + L3 LINE CR1 1338 1512 -65 359 388 67 9 chr2 60057940 60058164 -193198419 - MIR SINE MIR -7 255 19 5918 160 42 42 chr2 60058348 60059618 -193196965 + MER41-int LTR ERV1 3573 4842 -1104 187 245 176 29 chr2 60059618 60059720 -193196863 + L3 LINE CR1 1180 1296 -281 7361 200 108 16 chr2 60059726 60061836 -193194747 + L1PA16 LINE L1 2761 5257 -909 1155 68 0 0 chr2 60061836 60061984 -193194599 + L1PA10 LINE L1 6019 6166 -2 7361 200 108 16 chr2 60061984 60062984 -193193599 + L1PA16 LINE L1 5257 6164 -2 219 36 0 0 chr2 60064047 60064075 -193192508 + (CA)n Simple_repeat Simple_repeat 2 29 0 207 253 81 11 chr2 60064619 60064706 -193191877 - MIR SINE MIR -52 210 118 468 235 0 0 chr2 60064874 60064972 -193191611 - MIR SINE MIR -49 213 116 260 309 94 7 chr2 60065633 60065782 -193190801 - L2 LINE L2 -1265 2049 1888 413 75 99 0 chr2 60065852 60066013 -193190570 + (TA)n Simple_repeat Simple_repeat 2 178 0 25 51 0 0 chr2 60066013 60066052 -193190531 + AT_rich Low_complexity Low_complexity 1 39 0 407 96 96 3 chr2 60066057 60066381 -193190202 + (TA)n Simple_repeat Simple_repeat 1 354 0 220 102 66 36 chr2 60066405 60066572 -193190011 + (TATAG)n Simple_repeat Simple_repeat 4 175 0 307 115 42 42 chr2 60066602 60066767 -193189816 + (TATAA)n Simple_repeat Simple_repeat 5 169 0 432 119 100 0 chr2 60066768 60066928 -193189655 + (TA)n Simple_repeat Simple_repeat 2 177 0 428 136 93 0 chr2 60066976 60067138 -193189445 + (TA)n Simple_repeat Simple_repeat 2 178 0 406 74 105 0 chr2 60067162 60067324 -193189259 + (TA)n Simple_repeat Simple_repeat 1 179 0 1899 117 58 102 chr2 60067324 60067793 -193188790 + LTR7 LTR ERV1 1 448 -2 1497 74 0 0 chr2 60067795 60067997 -193188586 + HERVH LTR ERV1 1 202 -7511 220 91 76 0 chr2 60068021 60068087 -193188496 + (TA)n Simple_repeat Simple_repeat 1 71 0 1899 117 58 102 chr2 60068087 60068556 -193188027 + LTR7 LTR ERV1 1 448 -2 15572 99 22 22 chr2 60068558 60071424 -193185159 + HERVH LTR ERV1 1 2987 -4726 866 149 20 0 chr2 60071418 60071566 -193185017 + HERVH LTR ERV1 3140 3290 -4423 * 3201 115 14 2 chr2 60071556 60072052 -193184531 + HERVH LTR ERV1 3492 3993 -3720 4176 149 5 6 chr2 60072054 60072717 -193183866 + HERVH LTR ERV1 4488 5149 -2564 1329 136 18 9 chr2 60072714 60072935 -193183648 + HERVH LTR ERV1 5597 5819 -1894 * 2484 78 44 21 chr2 60072933 60073316 -193183267 + HERVH LTR ERV1 7322 7713 0 1998 118 77 59 chr2 60073316 60073756 -193182827 + LTR7 LTR ERV1 1 448 -2 22 0 0 0 chr2 60073756 60073778 -193182805 + AT_rich Low_complexity Low_complexity 1 22 0 1887 147 10 10 chr2 60073778 60074078 -193182505 - AluSx SINE Alu -12 300 1 446 295 143 32 chr2 60074908 60075125 -193181458 + MIR SINE MIR 13 253 -9 343 295 248 0 chr2 60075789 60075918 -193180665 + MER5A DNA MER1_type 26 186 -3 303 186 93 121 chr2 60077207 60077347 -193179236 + MER5B DNA MER1_type 36 171 -7 2695 20 0 0 chr2 60077893 60078197 -193178386 + AluY SINE Alu 1 304 -7 1985 156 0 3 chr2 60078246 60078553 -193178030 - AluSx SINE Alu -6 306 1 303 71 0 0 chr2 60079135 60079177 -193177406 + (TA)n Simple_repeat Simple_repeat 1 42 0 623 286 56 14 chr2 60080541 60080915 -193175668 + LTR16A LTR ERVL 18 450 0 422 327 128 0 chr2 60080915 60081071 -193175512 + HERV16 LTR ERVL 1 176 -4820 2127 341 77 15 chr2 60081247 60082358 -193174225 + HERV16 LTR ERVL 394 1572 -3424 1311 278 27 32 chr2 60082403 60082809 -193173774 + HERV16 LTR ERVL 1688 2091 -2905 1988 310 27 26 chr2 60082860 60083601 -193172982 + HERV16 LTR ERVL 2267 3008 -1988 26 50 0 0 chr2 60083819 60083859 -193172724 + AT_rich Low_complexity Low_complexity 1 40 0 220 259 22 22 chr2 60083859 60083994 -193172589 + (TA)n Simple_repeat Simple_repeat 1 135 0 519 266 49 14 chr2 60085299 60085442 -193171141 - MER5B DNA MER1_type -4 174 27 21 36 0 0 chr2 60085960 60085988 -193170595 + AT_rich Low_complexity Low_complexity 1 28 0 2425 64 0 10 chr2 60086233 60086545 -193170038 - AluY SINE Alu -2 309 1 269 270 68 0 chr2 60087032 60087106 -193169477 + MIR3 SINE MIR 106 184 -24 573 265 240 0 chr2 60087761 60087961 -193168622 + MIR SINE MIR 2 249 -13 237 65 0 0 chr2 60088135 60088166 -193168417 + (T)n Simple_repeat Simple_repeat 1 31 0 221 193 18 18 chr2 60088624 60088681 -193167902 + (TGAA)n Simple_repeat Simple_repeat 3 59 0 2138 114 10 0 chr2 60088773 60089062 -193167521 - AluY SINE Alu -17 294 3 4929 129 35 3 chr2 60289287 60290053 -192966530 - L1P LINE L1 -5355 791 1 6545 244 21 3 chr2 60290056 60291502 -192965081 + MSTB1-int LTR MaLR 138 1610 -41 2275 190 24 0 chr2 60291541 60291963 -192964620 + MSTB1 LTR MaLR 1 432 0 5026 187 27 14 chr2 60291963 60293808 -192962775 + L1MA4 LINE L1 4363 6227 -73 2174 178 5 3 chr2 60293819 60294202 -192962381 + Tigger2 DNA MER2_type 2335 2718 0 29 28 0 0 chr2 60294716 60294752 -192961831 + AT_rich Low_complexity Low_complexity 1 36 0 3617 19 0 0 chr2 60295133 60295552 -192961031 - L1PA3 LINE L1 0 6155 5737 26791 30 1 1 chr2 60295552 60299167 -192957416 + L1PA3 LINE L1 2126 5737 -418 189 74 0 0 chr2 60299516 60299543 -192957040 + (TTG)n Simple_repeat Simple_repeat 2 28 0 375 280 57 31 chr2 60299674 60299867 -192956716 - HAL1b LINE L1 -489 859 662 241 282 0 0 chr2 60300225 60300296 -192956287 + L1MEc LINE L1 2240 2310 -4086 469 301 78 29 chr2 60300476 60300822 -192955761 + L1MEc LINE L1 2577 2939 -3276 2140 119 114 5 chr2 60301234 60301620 -192954963 - MSTA LTR MaLR 0 428 1 182 227 27 136 chr2 60302128 60302203 -192954380 + MER5C DNA MER1_type 7 68 -256 383 88 118 0 chr2 60302203 60302271 -192954312 - MADE1 DNA Mariner 0 80 5 182 227 27 136 chr2 60302271 60302305 -192954278 + MER5C DNA MER1_type 68 104 -220 2043 103 0 4 chr2 60302725 60302997 -192953586 + AluSx SINE Alu 25 295 -17 300 98 0 0 chr2 60303321 60303362 -192953221 - U2 snRNA snRNA -147 41 1 243 88 0 0 chr2 60303584 60303618 -192952965 + (TA)n Simple_repeat Simple_repeat 1 34 0 304 285 117 7 chr2 60303703 60303840 -192952743 + L1ME4a LINE L1 5512 5663 -458 309 286 125 5 chr2 60303873 60304065 -192952518 + L1ME4a LINE L1 5708 5922 -199 266 315 87 16 chr2 60304089 60304273 -192952310 + L1ME2 LINE L1 597 793 -5326 1997 196 92 11 chr2 60304400 60304848 -192951735 + LTR42 LTR ERVL 1 484 -11 192 40 0 0 chr2 60304896 60304921 -192951662 + (CA)n Simple_repeat Simple_repeat 2 26 0 2391 167 68 58 chr2 60305070 60305669 -192950914 - MER6A DNA MER2_type 0 605 1 296 304 118 6 chr2 60306308 60306469 -192950114 - MIR SINE MIR 0 262 84 295 323 44 35 chr2 60306895 60307211 -192949372 + L1ME2 LINE L1 3866 4184 -1945 22 35 0 0 chr2 60307868 60307897 -192948686 + AT_rich Low_complexity Low_complexity 1 29 0 1005 214 41 73 chr2 60308202 60308304 -192948279 - LTR40b LTR ERVL -83 379 275 2226 104 3 0 chr2 60308304 60308602 -192947981 - AluSp SINE Alu -13 300 2 1005 214 41 73 chr2 60308602 60308816 -192947767 - LTR40b LTR ERVL -187 275 73 1815 245 37 16 chr2 60309361 60309871 -192946712 + L1MD3 LINE L1 7422 7942 -53 286 265 71 0 chr2 60310231 60310329 -192946254 + MLT1F LTR MaLR 264 368 -174 2181 107 3 0 chr2 60310869 60311168 -192945415 + AluSp SINE Alu 3 302 -11 21 0 0 0 chr2 60311627 60311648 -192944935 + AT_rich Low_complexity Low_complexity 1 21 0 316 272 58 29 chr2 60311794 60312037 -192944546 + L1ME2 LINE L1 4147 4396 -1733 * 1121 282 114 32 chr2 60312030 60312619 -192943964 + L1ME2 LINE L1 5405 6041 -106 423 228 83 62 chr2 60312658 60312851 -192943732 + L1MC4 LINE L1 6353 6549 -1493 1023 249 40 11 chr2 60312878 60313185 -192943398 + L1MC4 LINE L1 6703 7067 -782 442 173 12 0 chr2 60313277 60313358 -192943225 + LTR9 LTR ERV1 3 84 -528 963 279 92 18 chr2 60313368 60313856 -192942727 + L1ME3A LINE L1 4748 5271 -875 984 181 43 38 chr2 60313860 60314070 -192942513 + L1PB4 LINE L1 5942 6152 -4 944 298 146 14 chr2 60314173 60314867 -192941716 + L1ME3A LINE L1 5374 6158 -12 22 0 0 0 chr2 60314997 60315019 -192941564 + AT_rich Low_complexity Low_complexity 1 22 0 231 365 77 12 chr2 60316022 60316192 -192940391 + MIR3 SINE MIR 21 201 -7 2767 110 14 5 chr2 60316505 60316943 -192939640 + L1MA5A LINE L1 5853 6294 -3 368 180 23 8 chr2 60317018 60317146 -192939437 + (TA)n Simple_repeat Simple_repeat 1 130 0 2369 58 0 3 chr2 60318511 60318806 -192937777 + AluY SINE Alu 2 295 -16 2079 125 3 0 chr2 60319030 60319325 -192937258 - AluSx SINE Alu -16 296 1 204 390 0 0 chr2 60319467 60319549 -192937034 - L2 LINE L2 0 3313 3232 16757 36 10 0 chr2 60319655 60322439 -192934144 + L1PA4 LINE L1 3360 6152 -3 23 0 0 0 chr2 60322439 60322462 -192934121 + AT_rich Low_complexity Low_complexity 1 23 0 468 276 91 32 chr2 60322475 60322783 -192933800 + L1ME LINE L1 3991 4316 -1830 474 175 22 95 chr2 60322814 60322951 -192933632 - FLAM_A SINE Alu -1 141 15 760 238 63 34 chr2 60322951 60323300 -192933283 + L1ME LINE L1 4363 4721 -1425 534 241 9 0 chr2 60323672 60323780 -192932803 + MER70B LTR ERVL 462 570 -8 451 284 92 51 chr2 60323827 60324218 -192932365 + L1ME LINE L1 4803 5209 -937 462 264 191 11 chr2 60324220 60324398 -192932185 + L1MC3 LINE L1 6737 6946 -839 189 0 0 0 chr2 60324398 60324419 -192932164 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 324 248 10 20 chr2 60324431 60324532 -192932051 + L1ME LINE L1 5736 5835 -331 330 322 41 8 chr2 60324924 60325045 -192931538 - L2 LINE L2 -9 3304 3180 306 225 0 0 chr2 60325665 60325745 -192930838 + (TATATG)n Simple_repeat Simple_repeat 3 82 0 2155 224 16 50 chr2 60326646 60327197 -192929386 + MLT2B3 LTR ERVL 1 486 -34 234 105 0 0 chr2 60327197 60327235 -192929348 + (TCTA)n Simple_repeat Simple_repeat 1 38 0 232 158 88 18 chr2 60327235 60327292 -192929291 + MLT2B3 LTR ERVL 458 518 -2 * 559 198 24 0 chr2 60327292 60327415 -192929168 + MER63 DNA MER1_type 74 199 -731 734 159 0 61 chr2 60327417 60327580 -192929003 - L1MA9 LINE L1 -1 6311 6159 264 216 81 54 chr2 60327756 60327867 -192928716 - L3 LINE CR1 -288 1289 1176 239 341 60 60 chr2 60328124 60328373 -192928210 + MIR SINE MIR 1 249 -13 394 386 79 29 chr2 60328441 60328861 -192927722 + L1MEc LINE L1 99 539 -5857 315 223 38 105 chr2 60328908 60329146 -192927437 + L1MEc LINE L1 882 1103 -5293 2904 222 63 4 chr2 60329218 60329993 -192926590 - L1P LINE L1 -2852 3294 2474 8634 196 40 13 chr2 60329993 60331332 -192925251 + L1PA15 LINE L1 1440 2742 -3921 255 31 0 0 chr2 60331332 60331364 -192925219 + (TC)n Simple_repeat Simple_repeat 2 33 0 200 59 29 0 chr2 60331363 60331397 -192925186 + (TA)n Simple_repeat Simple_repeat 1 35 0 * 8634 196 40 13 chr2 60331364 60333093 -192923490 + L1PA15 LINE L1 2742 6663 0 1886 122 20 0 chr2 60333096 60333391 -192923192 + L1MA2 LINE L1 6004 6304 0 3713 67 3 9 chr2 60333469 60334175 -192922408 - L1PA8A LINE L1 -398 5733 5034 2623 87 18 5 chr2 60334175 60334565 -192922018 + L1PA8A LINE L1 5736 6130 -1 830 304 90 21 chr2 60334947 60335479 -192921104 - L1M4 LINE L1 -1971 4175 3607 264 282 19 7 chr2 60335691 60335822 -192920761 + L1ME2 LINE L1 1788 1961 -4630 640 275 89 52 chr2 60336072 60337206 -192919377 + L1ME2 LINE L1 2132 3276 -3264 310 274 10 20 chr2 60337224 60337326 -192919257 + L1ME2 LINE L1 5348 5448 -1092 189 0 0 0 chr2 60337476 60337497 -192919086 + (CA)n Simple_repeat Simple_repeat 2 22 0 180 111 0 0 chr2 60337496 60337523 -192919060 + (TATATG)n Simple_repeat Simple_repeat 3 29 0 * 201 178 14 41 chr2 60337547 60337620 -192918963 + (TA)n Simple_repeat Simple_repeat 1 71 0 309 159 12 74 chr2 60337648 60337811 -192918772 + (TA)n Simple_repeat Simple_repeat 1 153 0 1365 230 46 114 chr2 60337811 60338642 -192917941 + L1ME2 LINE L1 5769 6542 -16 192 125 0 0 chr2 60338644 60338676 -192917907 + (GGA)n Simple_repeat Simple_repeat 3 34 0 7301 37 1 1 chr2 60339025 60340457 -192916126 + L1PA5 LINE L1 4707 6138 -16 1904 44 0 0 chr2 60340228 60340457 -192916126 + L1PA5 LINE L1 5910 6181 0 367 23 0 0 chr2 60340457 60340500 -192916083 + (TAAA)n Simple_repeat Simple_repeat 3 176 0 3306 208 10 13 chr2 60341017 60341729 -192914854 + MER67C LTR ERV1 1 710 0 195 380 35 21 chr2 60342653 60342795 -192913788 + MIR3 SINE MIR 16 159 -49 307 260 48 10 chr2 60343797 60343901 -192912682 + HAL1b LINE L1 1232 1339 -9 200 194 0 0 chr2 60343903 60343939 -192912644 + (TG)n Simple_repeat Simple_repeat 1 36 0 21 0 0 0 chr2 60344578 60344599 -192911984 + AT_rich Low_complexity Low_complexity 1 21 0 390 139 0 0 chr2 60346019 60346091 -192910492 + (TC)n Simple_repeat Simple_repeat 2 73 0 32 86 0 0 chr2 60346291 60346372 -192910211 + AT_rich Low_complexity Low_complexity 1 81 0 1622 103 47 0 chr2 60346735 60346967 -192909616 + AluSc SINE Alu 67 309 0 24 77 0 0 chr2 60347128 60347180 -192909403 + AT_rich Low_complexity Low_complexity 1 52 0 30 27 0 0 chr2 60347205 60347242 -192909341 + AT_rich Low_complexity Low_complexity 1 37 0 2189 78 0 0 chr2 60347248 60347516 -192909067 - AluSq SINE Alu -45 268 1 511 184 56 32 chr2 60347701 60347826 -192908757 + FLAM_A SINE Alu 10 137 -5 22 35 0 0 chr2 60347908 60347937 -192908646 + AT_rich Low_complexity Low_complexity 1 29 0 1381 68 0 26 chr2 60348214 60348406 -192908177 + pTR5 LTR ERV1 1839 2025 -413 264 179 0 0 chr2 60348406 60348462 -192908121 + LTR30 LTR ERV1 544 599 -123 285 231 13 0 chr2 60348463 60348541 -192908042 + LTR30 LTR ERV1 564 642 -80 2439 72 0 12 chr2 60348541 60348872 -192907711 + pTR5 LTR ERV1 66 392 -2046 483 220 17 8 chr2 60348969 60349087 -192907496 - L1MA6 LINE L1 0 6300 6182 1486 211 71 33 chr2 60349087 60349481 -192907102 - MSTB1 LTR MaLR -7 425 17 392 202 32 4 chr2 60349484 60349578 -192907005 - L1MA6 LINE L1 -100 6200 6107 691 252 133 4 chr2 60349657 60349943 -192906640 + MER58 DNA MER1_type 2 2418 -2 2274 125 0 0 chr2 60350742 60351054 -192905529 - AluSq SINE Alu -1 312 1 1926 157 0 0 chr2 60351346 60351640 -192904943 - AluSx SINE Alu -18 294 1 204 307 53 13 chr2 60351751 60351826 -192904757 + L2 LINE L2 3190 3267 -5 1424 209 19 7 chr2 60352239 60352546 -192904037 - AluSx SINE Alu -1 311 1 9098 168 19 11 chr2 60352967 60355520 -192901063 - L1PA13 LINE L1 -2 6161 3606 217 247 41 27 chr2 60356130 60356203 -192900380 - L2 LINE L2 -4 3268 3195 1294 159 22 122 chr2 60356634 60356954 -192899629 + AluJb SINE Alu 7 294 -18 360 0 0 0 chr2 60357352 60357392 -192899191 + (TG)n Simple_repeat Simple_repeat 2 41 0 2051 117 3 0 chr2 60357772 60358093 -192898490 - AluSx SINE Alu 0 322 1 326 269 45 67 chr2 60358138 60358272 -192898311 - L2 LINE L2 -1999 1315 1185 25 0 0 0 chr2 60360065 60360090 -192896493 + AT_rich Low_complexity Low_complexity 1 25 0 280 296 61 0 chr2 60360254 60360369 -192896214 + HAL1b LINE L1 483 604 -744 595 232 57 66 chr2 60360626 60360837 -192895746 - MER63A DNA MER1_type -1 209 1 24 32 0 0 chr2 60360856 60360887 -192895696 + AT_rich Low_complexity Low_complexity 1 31 0 200 235 15 0 chr2 60360907 60360975 -192895608 + GA-rich Low_complexity Low_complexity 2 70 0 440 301 110 77 chr2 60361321 60362421 -192894162 + L1 LINE L1 2286 3421 -2725 225 286 0 0 chr2 60362447 60362510 -192894073 + L1MC3 LINE L1 6067 6129 -1656 2890 259 84 21 chr2 60362687 60363403 -192893180 + L1MC3 LINE L1 6173 6979 -806 1569 137 15 42 chr2 60363403 60363666 -192892917 + AluSx SINE Alu 38 293 -19 2890 259 84 21 chr2 60363666 60364007 -192892576 + L1MC3 LINE L1 6979 7297 -488 3364 231 13 13 chr2 60364022 60364871 -192891712 + L1 LINE L1 4419 5267 -879 1319 139 0 0 chr2 60364861 60365069 -192891514 + L1P LINE L1 4382 4589 -1557 * 632 181 0 9 chr2 60365067 60365183 -192891400 - L1P LINE L1 -1451 4695 4581 * 2688 170 34 25 chr2 60365337 60365901 -192890682 - L1M3 LINE L1 -346 5822 5254 806 80 0 56 chr2 60365906 60366031 -192890552 - L1PA8 LINE L1 0 6172 6055 800 111 0 17 chr2 60366034 60366151 -192890432 - AluSc SINE Alu -8 301 187 908 98 0 0 chr2 60366151 60366283 -192890300 - L1PA8 LINE L1 -106 6066 5935 4461 101 2 0 chr2 60366284 60367291 -192889292 - L1PA8 LINE L1 -475 5697 4690 356 59 20 0 chr2 60368292 60368343 -192888240 + (TCTA)n Simple_repeat Simple_repeat 1 52 0 516 200 9 0 chr2 60368353 60368458 -192888125 - L1PA16 LINE L1 -18 6148 6043 1591 182 3 34 chr2 60369010 60369301 -192887282 - AluJo SINE Alu -25 287 6 219 303 28 37 chr2 60370779 60370888 -192885695 + MIR SINE MIR 34 141 -67 815 175 0 47 chr2 60370930 60371101 -192885482 + MLT1C LTR MaLR 3 165 -302 25 0 0 0 chr2 60371300 60371325 -192885258 + AT_rich Low_complexity Low_complexity 1 25 0 1607 234 93 25 chr2 60371367 60371838 -192884745 + MLT1D LTR MaLR 3 505 0 5708 129 33 7 chr2 60372424 60374490 -192882093 - L1PA15 LINE L1 -5 6160 4059 21 0 0 0 chr2 60374500 60374521 -192882062 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 60374651 60374675 -192881908 + AT_rich Low_complexity Low_complexity 1 24 0 1827 262 94 27 chr2 60374783 60376631 -192879952 + L1ME1 LINE L1 1417 3353 -2862 6746 139 12 12 chr2 60376635 60378741 -192877842 + L1MA1 LINE L1 4195 6302 0 994 283 95 20 chr2 60378989 60379580 -192877003 + L1ME1 LINE L1 3445 4079 -2136 268 239 125 43 chr2 60379735 60379919 -192876664 + L1ME1 LINE L1 5192 5390 -825 330 291 60 15 chr2 60379932 60380066 -192876517 + L1ME1 LINE L1 6008 6147 -19 1379 277 88 17 chr2 60380067 60380660 -192875923 + L1ME1 LINE L1 5382 6016 -219 256 111 67 0 chr2 60380669 60380714 -192875869 + L1MB1 LINE L1 6118 6165 -3 24 77 0 0 chr2 60380714 60380766 -192875817 + AT_rich Low_complexity Low_complexity 1 52 0 652 189 21 14 chr2 60380778 60380921 -192875662 + L1MA10 LINE L1 6180 6323 -11 493 239 17 122 chr2 60380941 60381171 -192875412 + L1ME1 LINE L1 6024 6229 -6 327 275 114 34 chr2 60382212 60382252 -192874331 + L1ME LINE L1 5248 5283 -879 2092 155 75 54 chr2 60382252 60382755 -192873828 + MER67D LTR ERV1 1 514 0 327 275 114 34 chr2 60382755 60382899 -192873684 + L1ME LINE L1 5283 5450 -712 399 288 89 39 chr2 60382967 60383224 -192873359 + L1ME LINE L1 5549 5818 -344 1357 174 87 40 chr2 60383319 60383452 -192873131 - AluJo SINE Alu -22 290 165 2688 0 0 0 chr2 60383452 60383742 -192872841 - AluYa5 SINE Alu -1 310 21 1357 174 87 40 chr2 60383742 60383884 -192872699 - AluJo SINE Alu -147 165 2 1571 199 0 4 chr2 60384079 60384348 -192872235 - MER89 LTR ERV1 -54 505 238 1010 52 22 15 chr2 60384348 60384484 -192872099 + MER85 DNA T2_type 1 137 -2 319 224 96 4 chr2 60384484 60384637 -192871946 - MER89 LTR ERV1 -323 236 6 31 26 0 0 chr2 60384725 60384763 -192871820 + AT_rich Low_complexity Low_complexity 1 38 0 261 285 147 80 chr2 60387578 60387967 -192868616 - MLT1J LTR MaLR 0 511 97 184 339 94 31 chr2 60388220 60388347 -192868236 - L2 LINE L2 -212 3060 2926 200 268 73 0 chr2 60388956 60389038 -192867545 - MIR SINE MIR -51 211 124 2768 146 19 25 chr2 60389697 60390260 -192866323 + L1MA1 LINE L1 5743 6302 0 671 315 42 13 chr2 60390508 60390889 -192865694 + L1M4 LINE L1 3376 3767 -2379 27 0 0 0 chr2 60391015 60391042 -192865541 + GC_rich Low_complexity Low_complexity 1 27 0 234 0 0 0 chr2 60391361 60391387 -192865196 + (TA)n Simple_repeat Simple_repeat 1 26 0 23 0 0 0 chr2 60391402 60391425 -192865158 + AT_rich Low_complexity Low_complexity 1 23 0 195 42 0 0 chr2 60392436 60392460 -192864123 + (GGAAA)n Simple_repeat Simple_repeat 4 27 0 1215 94 0 0 chr2 60392463 60392643 -192863940 + (GGGGA)n Simple_repeat Simple_repeat 1 180 0 196 128 21 21 chr2 60392688 60392735 -192863848 + GA-rich Low_complexity Low_complexity 3 49 0 23 33 0 0 chr2 60393001 60393031 -192863552 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr2 60393334 60393364 -192863219 + AT_rich Low_complexity Low_complexity 1 30 0 2240 67 13 19 chr2 60393494 60393807 -192862776 + AluY SINE Alu 1 311 0 670 237 15 0 chr2 60393841 60393976 -192862607 + FLAM_C SINE Alu 2 138 -5 264 253 0 27 chr2 60393993 60394068 -192862515 + MLT1L LTR MaLR 214 286 -329 21 36 0 0 chr2 60394697 60394725 -192861858 + AT_rich Low_complexity Low_complexity 1 28 0 186 43 0 0 chr2 60395227 60395250 -192861333 + (TTAA)n Simple_repeat Simple_repeat 2 24 0 2011 138 3 0 chr2 60395381 60395684 -192860899 - AluSx SINE Alu 0 304 1 1145 111 43 43 chr2 60395843 60396051 -192860532 + MER49 LTR ERV1 178 385 -538 2486 17 0 0 chr2 60396051 60396352 -192860231 - L1P LINE L1 -842 5304 5004 5037 16 2 0 chr2 60396352 60396930 -192859653 + L1PA2 LINE L1 5574 6152 -3 3092 144 24 22 chr2 60396952 60397488 -192859095 + MER49 LTR ERV1 378 914 -9 357 355 106 34 chr2 60397741 60398062 -192858521 + L2 LINE L2 2604 2947 -367 663 344 48 6 chr2 60398090 60398421 -192858162 + L1MC/D LINE L1 5445 5789 -2019 280 245 26 103 chr2 60398751 60398906 -192857677 - L1ME LINE L1 -482 5639 5497 206 146 0 24 chr2 60398958 60398999 -192857584 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 24 53 0 0 chr2 60399429 60399467 -192857116 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr2 60399550 60399571 -192857012 + AT_rich Low_complexity Low_complexity 1 21 0 2937 226 36 11 chr2 60400122 60400787 -192855796 + LTR1B LTR ERV1 1 682 -144 14772 175 64 13 chr2 60400794 60403990 -192852593 + L1 LINE L1 729 4085 -3480 5981 109 13 8 chr2 60403993 60404895 -192851688 + L1MA1 LINE L1 5392 6298 -4 36 0 0 0 chr2 60404895 60404931 -192851652 + AT_rich Low_complexity Low_complexity 1 36 0 1082 170 0 0 chr2 60404931 60405137 -192851446 + L1 LINE L1 6111 6316 -1249 613 246 167 74 chr2 60407108 60407489 -192849094 - L1ME2 LINE L1 -66 6596 6163 2264 99 0 0 chr2 60407489 60407781 -192848802 - AluY SINE Alu -3 308 17 613 246 167 74 chr2 60407781 60407859 -192848724 - L1ME2 LINE L1 -499 6163 6094 775 206 81 14 chr2 60407859 60408068 -192848515 - MLT1C LTR MaLR -186 281 59 626 249 29 25 chr2 60408124 60408365 -192848218 - L1ME2 LINE L1 -1804 4840 4599 1377 92 5 22 chr2 60408365 60408550 -192848033 + AluSp SINE Alu 99 280 -33 414 0 0 0 chr2 60408550 60408596 -192847987 + (TAAA)n Simple_repeat Simple_repeat 4 49 0 1166 293 156 11 chr2 60408642 60409658 -192846925 - L1ME2 LINE L1 -2119 4525 3363 * 4611 175 22 12 chr2 60409652 60410635 -192845948 - L1 LINE L1 -1315 6250 5258 * 6854 210 78 10 chr2 60410631 60411842 -192844741 - L1 LINE L1 -4587 2978 1851 7351 171 151 26 chr2 60411842 60413401 -192843182 - MER52A LTR ERV1 -1 1754 1 6854 210 78 10 chr2 60413401 60414244 -192842339 - L1 LINE L1 -5714 1851 12 283 260 118 6 chr2 60414318 60414487 -192842096 - L1ME2 LINE L1 -4783 1861 1674 2303 88 23 0 chr2 60414500 60414806 -192841777 - AluSp SINE Alu 0 313 1 469 275 134 44 chr2 60414810 60415130 -192841453 - L1ME2 LINE L1 -4956 1586 1238 26 74 0 0 chr2 60415390 60415444 -192841139 + AT_rich Low_complexity Low_complexity 1 54 0 274 313 78 18 chr2 60416823 60417107 -192839476 - L1ME3A LINE L1 -221 5949 5649 909 233 28 9 chr2 60418116 60418331 -192838252 + MER58A DNA MER1_type 5 223 -1 1714 261 53 6 chr2 60419356 60419869 -192836714 - MER90 LTR ERV1 0 614 78 313 193 149 9 chr2 60420738 60420852 -192835731 + MER53 DNA DNA 1 130 -59 203 179 0 0 chr2 60420896 60420935 -192835648 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 263 217 17 0 chr2 60421732 60421792 -192834791 + MER58 DNA MER1_type 2308 2368 -52 22 0 0 0 chr2 60422557 60422579 -192834004 + AT_rich Low_complexity Low_complexity 1 22 0 17049 187 44 21 chr2 60422714 60425855 -192830728 + L1MA2 LINE L1 15 3082 -4483 2108 112 4 4 chr2 60425855 60426172 -192830411 + AluSc SINE Alu 1 317 0 17049 187 44 21 chr2 60426172 60429206 -192827377 + L1MA2 LINE L1 3082 6343 -1222 6161 110 46 1 chr2 60429203 60430182 -192826401 + L1MA2 LINE L1 6700 7722 -1 * 283 372 66 0 chr2 60430247 60430384 -192826199 - MIR SINE MIR -71 191 46 1449 221 37 49 chr2 60430396 60430861 -192825722 + MER89 LTR ERV1 1 559 0 247 237 0 0 chr2 60431572 60431631 -192824952 + MER103 DNA DNA 31 89 -77 405 299 194 30 chr2 60431901 60432102 -192824481 + MIR SINE MIR 1 234 -28 42395 36 23 0 chr2 60433873 60439882 -192816701 + L1PA2 LINE L1 1 6148 -7 22 35 0 0 chr2 60439882 60439911 -192816672 + AT_rich Low_complexity Low_complexity 1 29 0 438 237 114 9 chr2 60442097 60442211 -192814372 - L2 LINE L2 -1 3312 3187 915 263 55 18 chr2 60442215 60442489 -192814094 + L2 LINE L2 2282 2565 -749 282 323 66 69 chr2 60442725 60443044 -192813539 + L1MD3 LINE L1 6637 6954 -1007 848 238 13 13 chr2 60443056 60443278 -192813305 + AluJo SINE Alu 1 208 -104 1399 234 45 96 chr2 60443279 60443741 -192812842 + L1MC5 LINE L1 7093 7577 -384 1556 25 0 35 chr2 60443741 60443939 -192812644 + L1PA5 LINE L1 5951 6141 -13 180 0 0 0 chr2 60443943 60443963 -192812620 + (TA)n Simple_repeat Simple_repeat 2 21 0 1399 234 45 96 chr2 60443963 60444362 -192812221 + L1MC5 LINE L1 7580 7915 -46 1374 205 68 27 chr2 60444966 60445303 -192811280 - MLT1B LTR MaLR -6 384 34 33 43 0 0 chr2 60445377 60445424 -192811159 + AT_rich Low_complexity Low_complexity 1 47 0 2359 120 43 3 chr2 60445425 60445801 -192810782 - L1PA15 LINE L1 -17 6148 5758 300 331 41 41 chr2 60445968 60446113 -192810470 + MIR SINE MIR 20 164 -98 43 35 0 0 chr2 60446124 60446181 -192810402 + AT_rich Low_complexity Low_complexity 1 57 0 2602 17 3 0 chr2 60446344 60446638 -192809945 - AluYb8 SINE Alu -3 315 21 182 282 35 35 chr2 60447048 60447133 -192809450 - MIR SINE MIR -155 107 23 205 328 16 0 chr2 60447435 60447496 -192809087 - MIR SINE MIR -114 148 87 231 326 159 15 chr2 60448280 60448412 -192808171 + MIR SINE MIR 40 190 -72 207 343 48 19 chr2 60448731 60448836 -192807747 - MIR SINE MIR -68 140 33 21 0 0 0 chr2 60449506 60449527 -192807056 + AT_rich Low_complexity Low_complexity 1 21 0 742 209 3 5 chr2 60450004 60450196 -192806387 - L1MD3 LINE L1 -18 7977 7708 573 302 10 24 chr2 60451062 60451267 -192805316 - L1M3e LINE L1 -6828 202 1 255 360 50 36 chr2 60452333 60452401 -192804182 + MIR SINE MIR 3 69 -193 1461 244 48 44 chr2 60452401 60452904 -192803679 + MLT1D LTR MaLR 1 505 0 255 360 50 36 chr2 60452904 60452974 -192803609 + MIR SINE MIR 69 143 -119 672 224 127 67 chr2 60452983 60453399 -192803184 - HsTC2 DNA Tc2 0 1900 1284 423 163 0 0 chr2 60453751 60453831 -192802752 + (CATATA)n Simple_repeat Simple_repeat 5 84 0 289 209 110 0 chr2 60456417 60456508 -192800075 + L1ME4a LINE L1 5783 5883 -238 1883 114 73 0 chr2 60457720 60457992 -192798591 - AluSq SINE Alu -19 294 3 276 190 69 0 chr2 60458459 60458517 -192798066 + HERVL LTR ERVL 2401 2462 -3192 251 247 247 0 chr2 60458526 60458599 -192797984 + MER58 DNA MER1_type 1 91 -2329 254 231 77 0 chr2 60458624 60458689 -192797894 + MER58 DNA MER1_type 2348 2417 -3 556 300 21 11 chr2 60458903 60459093 -192797490 + HERVL LTR ERVL 2892 3083 -2681 2039 302 108 52 chr2 60459325 60460602 -192795981 + HERVL LTR ERVL 3352 4699 -1065 2774 10 3 0 chr2 60460700 60461010 -192795573 - AluY SINE Alu 0 311 1 253 376 21 10 chr2 60461412 60461606 -192794977 + HERVL LTR ERVL 5194 5389 -375 894 308 101 35 chr2 60461823 60462307 -192794276 + LTR33 LTR ERVL 3 518 -3 27 29 0 0 chr2 60462749 60462783 -192793800 + AT_rich Low_complexity Low_complexity 1 34 0 236 227 0 30 chr2 60463991 60464057 -192792526 - MLT1H LTR MaLR -32 517 454 742 221 163 95 chr2 60465332 60465712 -192790871 - MLT1G3 LTR MaLR -4 538 106 1775 163 17 3 chr2 60465943 60466231 -192790352 - AluJb SINE Alu -20 292 1 25 31 0 0 chr2 60466234 60466266 -192790317 + AT_rich Low_complexity Low_complexity 1 32 0 405 327 46 33 chr2 60466623 60466776 -192789807 + MER91A DNA MER1_type 42 196 0 416 287 127 6 chr2 60466876 60467033 -192789550 + MIR SINE MIR 51 226 -36 260 354 168 30 chr2 60467816 60468263 -192788320 + L2 LINE L2 2765 3272 0 24 0 0 0 chr2 60469096 60469120 -192787463 + AT_rich Low_complexity Low_complexity 1 24 0 637 199 20 13 chr2 60469362 60469513 -192787070 - MER53 DNA DNA -35 154 3 22 0 0 0 chr2 60469844 60469866 -192786717 + AT_rich Low_complexity Low_complexity 1 22 0 382 109 39 30 chr2 60470580 60470817 -192785766 + (TTATA)n Simple_repeat Simple_repeat 1 239 0 182 155 26 35 chr2 60470837 60470953 -192785630 + (TTATA)n Simple_repeat Simple_repeat 5 119 0 516 329 68 50 chr2 60472181 60472561 -192784022 - L2 LINE L2 0 3313 2927 1819 253 56 31 chr2 60472570 60473218 -192783365 + L1ME2 LINE L1 5491 6154 -10 1198 117 0 0 chr2 60473338 60473500 -192783083 - AluSq SINE Alu -151 162 1 1234 219 58 40 chr2 60473552 60474065 -192782518 - L1ME LINE L1 -710 5454 4940 2543 113 43 17 chr2 60474065 60474482 -192782101 - MSTA LTR MaLR 0 428 1 1234 219 58 40 chr2 60474482 60474535 -192782048 - L1ME LINE L1 -1224 4940 4889 907 326 40 69 chr2 60474580 60475203 -192781380 + L2 LINE L2 2149 2753 -561 236 367 20 20 chr2 60475226 60475324 -192781259 - L2 LINE L2 -22 3291 3194 400 308 98 63 chr2 60475833 60476181 -192780402 + L2 LINE L2 2921 3280 -33 647 274 34 0 chr2 60476323 60476502 -192780081 + MIR SINE MIR 4 188 -74 860 280 29 47 chr2 60476847 60477244 -192779339 - MLT1H LTR MaLR -18 531 26 3199 165 33 10 chr2 60478296 60478630 -192777953 - L1MA7 LINE L1 -25 6266 5933 1903 206 12 98 chr2 60478630 60479320 -192777263 - L1PA3 LINE L1 -226 5929 5336 1792 108 74 64 chr2 60479320 60479617 -192776966 - AluSg SINE Alu -10 300 1 1903 206 12 98 chr2 60479617 60479667 -192776916 - L1PA3 LINE L1 -819 5336 5283 234 81 0 0 chr2 60479668 60479705 -192776878 + (T)n Simple_repeat Simple_repeat 1 37 0 2227 85 0 3 chr2 60479755 60480049 -192776534 + AluY SINE Alu 1 293 -18 720 203 76 5 chr2 60480055 60480252 -192776331 - L1MA7 LINE L1 -864 5282 5072 181 320 72 31 chr2 60480365 60480462 -192776121 - MIR3 SINE MIR -8 200 100 * 442 330 15 45 chr2 60480458 60480658 -192775925 + MIR SINE MIR 7 200 -62 204 185 0 0 chr2 60480985 60481039 -192775544 + CT-rich Low_complexity Low_complexity 1 54 0 363 284 0 0 chr2 60481465 60481553 -192775030 - MIR SINE MIR -3 259 172 4887 183 25 14 chr2 60481611 60482735 -192773848 - L1PA16 LINE L1 -3 6163 5015 1020 43 14 14 chr2 60482735 60482876 -192773707 - L1PA13 LINE L1 -1 6162 6022 4887 183 25 14 chr2 60482876 60483384 -192773199 - L1PA16 LINE L1 -1151 5015 4514 402 220 10 0 chr2 60483381 60483481 -192773102 + L1PA16 LINE L1 4407 4507 -1639 * 190 75 25 25 chr2 60484106 60484118 -192772465 + (CA)n Simple_repeat Simple_repeat 2 13 -28 1621 229 28 3 chr2 60484118 60484471 -192772112 - MLT1A1 LTR MaLR 0 365 4 190 75 25 25 chr2 60484471 60484498 -192772085 + (CA)n Simple_repeat Simple_repeat 12 41 0 2281 104 3 0 chr2 60485215 60485522 -192771061 - AluSx SINE Alu -3 309 2 320 294 114 27 chr2 60485828 60486012 -192770571 + L2 LINE L2 3108 3307 -6 1505 162 10 51 chr2 60486797 60487111 -192769472 + MLT1B LTR MaLR 84 384 -6 762 244 189 32 chr2 60487179 60487491 -192769092 + MLT1D LTR MaLR 103 463 -42 21 0 0 0 chr2 60487491 60487512 -192769071 + AT_rich Low_complexity Low_complexity 1 21 0 27 62 0 0 chr2 60487542 60487590 -192768993 + AT_rich Low_complexity Low_complexity 1 48 0 477 84 0 0 chr2 60487697 60487768 -192768815 + (CA)n Simple_repeat Simple_repeat 2 72 0 211 195 0 0 chr2 60487978 60488019 -192768564 + (TTCA)n Simple_repeat Simple_repeat 3 43 0 198 133 67 0 chr2 60488113 60488203 -192768380 + (TA)n Simple_repeat Simple_repeat 1 96 0 205 286 104 0 chr2 60489330 60489407 -192767176 - L2 LINE L2 -12 3260 3176 238 331 63 24 chr2 60490509 60490636 -192765947 - L2 LINE L2 0 3313 3182 247 240 13 13 chr2 60491274 60491349 -192765234 - MER94 DNA DNA -54 80 6 360 312 9 0 chr2 60492067 60492176 -192764407 - MLT1F-int LTR MaLR -780 591 482 185 0 40 0 chr2 60492192 60492217 -192764366 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 740 96 0 43 chr2 60492218 60492333 -192764250 - L1PA8 LINE L1 -18 6154 6045 295 45 0 23 chr2 60492335 60492379 -192764204 + L1P3 LINE L1 5400 5442 -712 2300 104 0 0 chr2 60492407 60492714 -192763869 - AluSg SINE Alu -3 307 1 2088 118 6 19 chr2 60492854 60493167 -192763416 + AluSx SINE Alu 1 309 -3 295 268 123 7 chr2 60493220 60493358 -192763225 - MLT1F-int LTR MaLR -1216 155 2 1851 255 58 14 chr2 60493361 60493874 -192762709 - MLT1F LTR MaLR -2 540 5 205 59 29 88 chr2 60493988 60494056 -192762527 + (CCCA)n Simple_repeat Simple_repeat 3 66 0 204 97 0 0 chr2 60495248 60495279 -192761304 + (TG)n Simple_repeat Simple_repeat 2 32 0 202 396 59 12 chr2 60495509 60495678 -192760905 - MER5B DNA MER1_type 0 178 2 2687 86 36 0 chr2 60495808 60496192 -192760391 - L1PA10 LINE L1 -4 6164 5767 180 111 0 0 chr2 60497523 60497550 -192759033 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 337 239 51 17 chr2 60497872 60497989 -192758594 - L2 LINE L2 -1587 1727 1607 1638 198 56 99 chr2 60498000 60498369 -192758214 - L1 LINE L1 -1014 5132 4814 423 189 0 0 chr2 60498369 60498443 -192758140 - Tigger5 DNA MER2_type 0 2323 2250 1638 198 56 99 chr2 60498443 60498869 -192757714 - L1 LINE L1 -1332 4814 4371 1322 260 64 28 chr2 60498978 60499367 -192757216 - L2 LINE L2 -1750 1564 1162 1639 287 87 22 chr2 60499368 60500195 -192756388 + HAL1 LINE L1 1544 2424 -83 198 103 0 0 chr2 60500732 60500761 -192755822 + (TG)n Simple_repeat Simple_repeat 2 30 0 23 54 0 0 chr2 60500981 60501018 -192755565 + AT_rich Low_complexity Low_complexity 1 37 0 241 309 93 10 chr2 60501936 60502033 -192754550 + MIR SINE MIR 2 106 -156 1136 206 72 58 chr2 60502789 60503149 -192753434 + MLT1A1 LTR MaLR 1 365 0 212 100 0 60 chr2 60503915 60503965 -192752618 + (A)n Simple_repeat Simple_repeat 1 47 0 357 316 130 26 chr2 60504936 60505303 -192751280 + L1ME3A LINE L1 5384 5825 -345 1716 160 91 0 chr2 60505303 60505621 -192750962 + MER7A DNA MER2_type 2 346 0 357 316 130 26 chr2 60505621 60505763 -192750820 + L1ME3A LINE L1 5825 5951 -219 26 0 0 0 chr2 60505787 60505813 -192750770 + AT_rich Low_complexity Low_complexity 1 26 0 405 276 69 44 chr2 60506448 60506651 -192749932 + L1MC4 LINE L1 6799 7006 -1036 2185 104 70 50 chr2 60508258 60508409 -192748174 + THE1B LTR MaLR 1 148 -216 2102 133 7 0 chr2 60508409 60508709 -192747874 - AluSx SINE Alu -10 302 1 2185 104 70 50 chr2 60508709 60508914 -192747669 + THE1B LTR MaLR 148 364 0 1693 166 105 111 chr2 60509051 60509557 -192747026 + MLT1D LTR MaLR 1 503 -2 2336 64 3 3 chr2 60510900 60511198 -192745385 - AluY SINE Alu -13 298 1 210 369 54 24 chr2 60511308 60511476 -192745107 + MIR SINE MIR 20 192 -70 181 400 12 0 chr2 60512314 60512394 -192744189 - L3 LINE CR1 -459 1118 1038 314 191 21 64 chr2 60513101 60513195 -192743388 - L3 LINE CR1 -645 932 843 358 365 65 9 chr2 60513271 60513501 -192743082 + MIR SINE MIR 16 258 -4 460 268 6 67 chr2 60513931 60514110 -192742473 + MIR SINE MIR 95 262 0 350 320 20 14 chr2 60514650 60514797 -192741786 + MER5A DNA MER1_type 37 184 -5 627 291 24 10 chr2 60514881 60515087 -192741496 + MIR SINE MIR 53 261 -1 483 332 68 19 chr2 60516063 60516268 -192740315 + MIR SINE MIR 48 262 0 320 330 78 0 chr2 60516491 60516594 -192739989 - L2 LINE L2 -25 3247 3137 208 444 17 0 chr2 60517153 60517268 -192739315 - L2 LINE L2 -214 3058 2942 245 253 13 27 chr2 60517549 60517624 -192738959 - MLT1I LTR MaLR -62 347 274 292 394 36 14 chr2 60517673 60517894 -192738689 - L2 LINE L2 -579 2735 2510 2367 132 22 0 chr2 60518080 60518436 -192738147 - THE1B LTR MaLR 0 364 1 301 262 75 9 chr2 60518774 60518881 -192737702 + MIR SINE MIR 84 197 -65 4374 232 37 19 chr2 60518945 60520039 -192736544 - L1MD1 LINE L1 0 6636 5509 2097 118 3 0 chr2 60520039 60520326 -192736257 - AluSx SINE Alu -24 288 1 4374 232 37 19 chr2 60520326 60520664 -192735919 - L1MD1 LINE L1 -1127 5509 5179 1322 253 63 21 chr2 60520682 60521156 -192735427 - L1MD1 LINE L1 -1570 4970 4477 1148 190 160 66 chr2 60521330 60521662 -192734921 - MLT1A2 LTR MaLR -11 363 1 343 198 58 23 chr2 60521760 60521846 -192734737 - L1MD1 LINE L1 -6434 106 18 758 249 16 5 chr2 60522707 60522892 -192733691 + MER5A DNA MER1_type 3 189 0 403 269 70 29 chr2 60523444 60523615 -192732968 - MIR SINE MIR -59 203 26 1565 225 51 31 chr2 60524489 60524943 -192731640 + MLT1C LTR MaLR 5 467 0 2706 90 19 0 chr2 60525114 60525482 -192731101 + THE1C LTR MaLR 1 375 0 405 0 0 0 chr2 60525615 60525660 -192730923 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 25 31 0 0 chr2 60525902 60525934 -192730649 + AT_rich Low_complexity Low_complexity 1 32 0 244 250 25 12 chr2 60525934 60526014 -192730569 - L1MC4 LINE L1 -1322 6720 6640 226 222 99 74 chr2 60526265 60526427 -192730156 - L1MC/D LINE L1 -929 5430 5265 22 56 0 0 chr2 60526515 60526551 -192730032 + AT_rich Low_complexity Low_complexity 1 36 0 241 233 67 42 chr2 60526642 60526762 -192729821 - L1P LINE L1 -1097 5049 4927 434 281 78 12 chr2 60526868 60527035 -192729548 - L2 LINE L2 -1433 1881 1704 526 171 80 57 chr2 60527589 60527765 -192728818 - MER53 DNA DNA 0 189 10 405 314 74 93 chr2 60527874 60528403 -192728180 + HAL1 LINE L1 754 1272 -1235 2091 123 0 7 chr2 60528662 60528954 -192727629 + AluSg SINE Alu 1 290 -20 337 254 49 56 chr2 60529808 60529950 -192726633 + L2 LINE L2 3173 3313 0 327 25 0 0 chr2 60531141 60531181 -192725402 + (GA)n Simple_repeat Simple_repeat 1 40 0 1413 155 28 8 chr2 60531818 60532070 -192724513 + Tigger7 DNA MER2_type 2331 2587 0 259 357 35 45 chr2 60532742 60532942 -192723641 + MIR SINE MIR 20 216 -46 1427 199 10 23 chr2 60533254 60533556 -192723027 + AluJo SINE Alu 1 298 -14 468 51 0 0 chr2 60533570 60533629 -192722954 + (GGAA)n Simple_repeat Simple_repeat 2 60 0 22 0 0 0 chr2 60533961 60533983 -192722600 + AT_rich Low_complexity Low_complexity 1 22 0 7217 172 48 29 chr2 60534082 60536694 -192719889 - L1MA3 LINE L1 0 6305 3649 1783 195 100 5 chr2 60536694 60537083 -192719500 + MSTB LTR MaLR 1 426 0 8427 199 26 14 chr2 60537083 60538652 -192717931 + MSTB-int LTR MaLR 1 1593 -58 1693 162 67 18 chr2 60538652 60538979 -192717604 + MER61A LTR ERV1 1 343 0 8427 199 26 14 chr2 60538979 60539039 -192717544 + MSTB-int LTR MaLR 1593 1651 0 485 197 99 0 chr2 60539078 60539230 -192717353 - L1MD3 LINE L1 -972 7023 6857 4987 176 17 14 chr2 60539233 60540710 -192715873 - L1PB4 LINE L1 0 7575 6100 9161 194 41 14 chr2 60540722 60541780 -192714803 - L1PB4 LINE L1 -4237 3328 2300 479 74 0 62 chr2 60541780 60541861 -192714722 - L1PA13 LINE L1 0 6163 6088 9161 194 41 14 chr2 60541861 60543385 -192713198 - L1PB4 LINE L1 -5265 2300 11 1950 123 30 88 chr2 60543672 60544070 -192712513 - THE1C LTR MaLR 0 375 1 355 167 30 0 chr2 60544114 60544180 -192712403 - THE1C LTR MaLR -3 372 305 8564 142 13 22 chr2 60544184 60545809 -192710774 + L1PA11 LINE L1 3904 5477 -697 1902 149 0 0 chr2 60545809 60546134 -192710449 + AluSx SINE Alu 1 325 0 8564 142 13 22 chr2 60546134 60546823 -192709760 + L1PA11 LINE L1 5477 6170 -4 1280 206 96 7 chr2 60546835 60547117 -192709466 + LTR42 LTR ERVL 181 487 -8 394 267 199 11 chr2 60547441 60547632 -192708951 + L1MC5 LINE L1 6993 7219 -742 274 308 113 6 chr2 60547724 60547883 -192708700 + L1MC5 LINE L1 7261 7436 -525 690 243 28 39 chr2 60547890 60548123 -192708460 + L1MC/D LINE L1 5262 5500 -687 1788 162 10 10 chr2 60548331 60548640 -192707943 + LTR8A LTR ERV1 240 548 -179 918 224 5 15 chr2 60548677 60548873 -192707710 + LTR8 LTR ERV1 498 691 0 409 193 0 0 chr2 60548880 60548963 -192707620 - L1MC2 LINE L1 -97 6247 6165 320 100 0 114 chr2 60548963 60549009 -192707574 - LTR23 LTR ERV1 0 437 387 1995 101 0 28 chr2 60549009 60549297 -192707286 + AluSx SINE Alu 1 280 -32 248 77 26 0 chr2 60549297 60549336 -192707247 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 320 100 0 114 chr2 60549336 60549358 -192707225 - LTR23 LTR ERV1 -48 389 376 * 1956 119 52 3 chr2 60549343 60549670 -192706913 - LTR56 LTR ERV1 -75 370 28 1757 177 35 3 chr2 60549706 60550073 -192706510 - L1MC2 LINE L1 -176 6168 5790 235 128 51 0 chr2 60550107 60550146 -192706437 - MER2 DNA MER2_type -24 321 281 272 114 23 0 chr2 60550164 60550208 -192706375 - MER2 DNA MER2_type -299 46 2 5036 253 31 16 chr2 60550220 60551848 -192704735 - L1M4 LINE L1 -1747 4399 2748 2036 283 53 45 chr2 60554496 60556392 -192700191 - L1MC2 LINE L1 -558 5606 3728 964 182 87 30 chr2 60556401 60556632 -192699951 - THE1C LTR MaLR 0 375 132 306 125 0 0 chr2 60556791 60556839 -192699744 + (T)n Simple_repeat Simple_repeat 1 48 0 519 194 155 0 chr2 60556875 60557004 -192699579 - MER103 DNA DNA 0 166 18 220 371 66 36 chr2 60559293 60559460 -192697123 + L2 LINE L2 3140 3311 -2 510 306 64 34 chr2 60561072 60561369 -192695214 + HAL1 LINE L1 12 317 -2190 340 324 29 0 chr2 60561387 60561492 -192695091 + L2 LINE L2 3206 3313 0 289 333 10 0 chr2 60561526 60561622 -192694961 + HAL1 LINE L1 423 519 -1988 510 271 86 90 chr2 60561701 60562248 -192694335 + HAL1 LINE L1 659 1203 -1304 213 121 0 0 chr2 60562253 60562286 -192694297 + (GAAA)n Simple_repeat Simple_repeat 2 34 0 504 282 149 62 chr2 60562306 60562351 -192694232 + HAL1 LINE L1 1106 1146 -1361 1476 191 36 26 chr2 60562351 60562660 -192693923 + AluJo SINE Alu 1 312 0 504 282 149 62 chr2 60562660 60563216 -192693367 + HAL1 LINE L1 1146 1760 -747 436 209 0 22 chr2 60563320 60563454 -192693129 + G-rich Low_complexity Low_complexity 3 133 0 215 211 0 0 chr2 60563461 60563499 -192693084 + polypurine Low_complexity Low_complexity 4 41 0 876 161 8 8 chr2 60563499 60563726 -192692857 + GA-rich Low_complexity Low_complexity 1 227 0 945 279 29 67 chr2 60563745 60564341 -192692242 + HAL1 LINE L1 1935 2507 0 216 360 41 41 chr2 60565666 60565822 -192690761 - MIR SINE MIR -22 240 85 405 303 62 24 chr2 60565822 60566033 -192690550 + MIR SINE MIR 3 221 -41 1882 199 69 116 chr2 60566434 60567161 -192689422 + LTR8A LTR ERV1 35 727 0 2586 121 8 3 chr2 60567183 60567556 -192689027 - THE1C LTR MaLR 0 375 1 186 113 88 25 chr2 60567647 60567807 -192688776 + (TA)n Simple_repeat Simple_repeat 2 171 0 610 280 84 40 chr2 60569127 60569377 -192687206 + MIR SINE MIR 1 261 -1 21 36 0 0 chr2 60569721 60569749 -192686834 + AT_rich Low_complexity Low_complexity 1 28 0 599 224 132 5 chr2 60569822 60570027 -192686556 + L1ME LINE L1 4350 4580 -1566 908 129 0 0 chr2 60570545 60570677 -192685906 - FLAM_C SINE Alu -1 132 1 1541 215 61 0 chr2 60570929 60571273 -192685310 + MLT1A1 LTR MaLR 1 365 0 7596 28 0 0 chr2 60571851 60572950 -192683633 + L1PA3 LINE L1 5047 6150 -5 236 283 0 17 chr2 60573126 60573186 -192683397 - MIR SINE MIR -67 141 83 400 294 73 43 chr2 60573541 60573875 -192682708 + L1ME LINE L1 5454 5797 -324 287 342 135 29 chr2 60574156 60574533 -192682050 + L3 LINE CR1 612 1028 -549 13215 28 0 0 chr2 60574584 60576149 -192680434 + L1PA3 LINE L1 3555 5119 -1027 7705 15 0 0 chr2 60576250 60577297 -192679286 + L1PA3 LINE L1 5137 6183 0 373 243 65 47 chr2 60577301 60577408 -192679175 + L2 LINE L2 3205 3313 0 432 362 141 17 chr2 60577478 60577826 -192678757 + L3 LINE CR1 1136 1526 -51 330 268 52 39 chr2 60578824 60578977 -192677606 + MIR3 SINE MIR 39 193 -15 523 247 111 87 chr2 60579089 60579469 -192677114 - LTR16C LTR ERVL 0 491 103 314 352 91 46 chr2 60579697 60580186 -192676397 - L2 LINE L2 -67 3205 2709 251 362 153 34 chr2 60580627 60581534 -192675049 - L2 LINE L2 -564 2750 1736 198 71 0 0 chr2 60581543 60581571 -192675012 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 511 294 20 49 chr2 60581985 60582189 -192674394 - L2 LINE L2 -1 3312 3115 21 36 0 0 chr2 60582632 60582660 -192673923 + AT_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr2 60583213 60583235 -192673348 + (T)n Simple_repeat Simple_repeat 1 22 0 261 0 0 0 chr2 60583552 60583581 -192673002 + (TA)n Simple_repeat Simple_repeat 1 29 0 1985 134 10 3 chr2 60583582 60583872 -192672711 - AluSx SINE Alu -20 292 1 491 337 30 20 chr2 60584028 60584230 -192672353 + L3 LINE CR1 1372 1575 -2 268 265 0 0 chr2 60584744 60584812 -192671771 - LTR67 LTR ERVL -488 69 2 519 264 71 65 chr2 60586267 60586620 -192669963 - LTR16B LTR ERVL -1 463 109 24 96 0 0 chr2 60587536 60587609 -192668974 + AT_rich Low_complexity Low_complexity 1 73 0 2493 281 104 8 chr2 60588122 60588555 -192668028 + L2 LINE L2 2111 2501 -812 2118 148 31 77 chr2 60588555 60589008 -192667575 + MSTB1 LTR MaLR 1 432 0 2493 281 104 8 chr2 60589008 60589420 -192667163 + L2 LINE L2 2501 3031 -282 1065 315 82 27 chr2 60589420 60589935 -192666648 + MLT1H LTR MaLR 1 543 -6 1859 173 36 0 chr2 60590343 60590678 -192665905 - MER7A DNA MER2_type -1 345 1 464 273 0 0 chr2 60591404 60591503 -192665080 - Tigger7 DNA MER2_type 0 2587 2489 * 1309 266 0 0 chr2 60591501 60591768 -192664815 - Tigger7 DNA MER2_type -466 267 1 1830 191 31 8 chr2 60591873 60592230 -192664353 - MLT1A1 LTR MaLR 0 365 1 561 282 30 19 chr2 60592303 60592482 -192664101 + MLT1H LTR MaLR 3 168 -381 21 57 0 0 chr2 60593167 60593202 -192663381 + AT_rich Low_complexity Low_complexity 1 35 0 27 0 0 0 chr2 60593905 60593932 -192662651 + AT_rich Low_complexity Low_complexity 1 27 0 1787 208 26 10 chr2 60593955 60594339 -192662244 + MLT1B LTR MaLR 1 390 0 261 0 0 0 chr2 60594691 60594720 -192661863 + (TTG)n Simple_repeat Simple_repeat 2 30 0 232 269 42 42 chr2 60594897 60595016 -192661567 + MLT1J LTR MaLR 393 511 0 1341 179 8 0 chr2 60595411 60595645 -192660938 + MER46A DNA MER2_type 1 236 0 23 0 0 0 chr2 60595691 60595714 -192660869 + AT_rich Low_complexity Low_complexity 1 23 0 27 29 0 0 chr2 60596338 60596372 -192660211 + AT_rich Low_complexity Low_complexity 1 34 0 680 264 71 70 chr2 60596430 60596835 -192659748 + L1MC5 LINE L1 6607 6911 -897 1302 134 96 0 chr2 60596855 60597116 -192659467 - L1MA8 LINE L1 -6 6285 6000 303 358 45 14 chr2 60597308 60597663 -192658920 - L1ME LINE L1 -409 5712 5347 21 0 0 0 chr2 60597663 60597684 -192658899 + AT_rich Low_complexity Low_complexity 1 21 0 2166 70 40 33 chr2 60597738 60598040 -192658543 - AluY SINE Alu -7 304 1 587 350 125 28 chr2 60598867 60599290 -192657293 - L2 LINE L2 0 3313 2850 5164 222 50 29 chr2 60599299 60600198 -192656385 - L1MB5 LINE L1 -74 6100 5222 2527 89 73 0 chr2 60600198 60600581 -192656002 - L1MA2 LINE L1 0 6304 5894 975 47 24 0 chr2 60600581 60600707 -192655876 - L1PA12 LINE L1 0 6168 6039 5164 222 50 29 chr2 60600707 60601647 -192654936 - L1MB5 LINE L1 -952 5222 4211 1770 173 7 3 chr2 60601647 60601942 -192654641 + AluJb SINE Alu 1 296 -16 5164 222 50 29 chr2 60601942 60602142 -192654441 - L1MB5 LINE L1 -1963 4211 4017 487 165 0 0 chr2 60602143 60602240 -192654343 - L1MDa LINE L1 -4122 2418 2322 272 138 43 117 chr2 60602228 60602322 -192654261 + L1MC4 LINE L1 6617 6703 -1339 * 364 250 109 0 chr2 60602329 60602421 -192654162 + Tigger3b DNA MER2_type 1 102 -1129 * 2108 104 21 21 chr2 60602419 60602756 -192653827 + Tigger3b DNA MER2_type 274 610 -621 36900 32 23 1 chr2 60602756 60608141 -192648442 + L1PA3 LINE L1 665 6170 0 3005 161 54 10 chr2 60608161 60608739 -192647844 + Tigger3b DNA MER2_type 620 1222 -10 1145 209 78 24 chr2 60608752 60609125 -192647458 - L1MDa LINE L1 -4208 2332 1940 * 3526 237 111 52 chr2 60609102 60610184 -192646399 - L1MDa LINE L1 -5274 1266 121 353 222 0 0 chr2 60610207 60610270 -192646313 - Tigger3b DNA MER2_type -1081 150 88 409 294 78 17 chr2 60610384 60610564 -192646019 - MIR SINE MIR -57 205 15 211 302 35 35 chr2 60610565 60610651 -192645932 + L2 LINE L2 3187 3272 0 360 0 0 0 chr2 60610766 60610806 -192645777 + (TG)n Simple_repeat Simple_repeat 1 40 0 21 36 0 0 chr2 60610984 60611012 -192645571 + AT_rich Low_complexity Low_complexity 1 28 0 335 318 81 24 chr2 60611095 60611306 -192645277 - L1M4 LINE L1 -1450 4696 4474 2437 168 42 8 chr2 60611322 60611799 -192644784 - L1MA6 LINE L1 -9 6291 5799 2094 139 25 18 chr2 60611799 60612280 -192644303 + L1M2 LINE L1 5151 5636 -664 198 0 0 0 chr2 60613239 60613261 -192643322 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 681 45 0 0 chr2 60613272 60613360 -192643223 - L1PA4 LINE L1 0 6155 6068 395 258 10 10 chr2 60613364 60613461 -192643122 - MLT1J LTR MaLR -389 122 26 189 0 0 0 chr2 60616149 60616170 -192640413 + (TAAAAA)n Simple_repeat Simple_repeat 1 21 0 228 35 0 0 chr2 60616297 60616326 -192640257 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 27 62 0 0 chr2 60617372 60617420 -192639163 + AT_rich Low_complexity Low_complexity 1 48 0 492 153 0 63 chr2 60618063 60618174 -192638409 - AluJb SINE Alu 0 312 209 772 234 77 14 chr2 60618241 60618450 -192638133 + MER58A DNA MER1_type 2 223 -1 2689 228 65 28 chr2 60618521 60619526 -192637057 + L1MC4a LINE L1 6732 7808 0 226 311 16 0 chr2 60620266 60620327 -192636256 - L2 LINE L2 -1 3271 3210 1478 192 36 7 chr2 60620888 60621169 -192635414 - AluJo SINE Alu -23 289 1 5855 118 0 3 chr2 60621191 60622053 -192634530 - L1PA8A LINE L1 -1567 4579 3721 * 6259 106 10 0 chr2 60622050 60623587 -192632996 + L1PA8A LINE L1 4572 6118 -13 1404 237 98 9 chr2 60623628 60624066 -192632517 + Charlie4a DNA MER1_type 32 508 0 41950 36 24 1 chr2 60624534 60630552 -192626031 + L1PA3 LINE L1 13 6172 0 4012 199 2 4 chr2 60632241 60633082 -192623501 + L1 LINE L1 2330 3169 -2977 247 328 24 40 chr2 60633716 60633841 -192622742 + MIR SINE MIR 81 203 -59 445 301 33 13 chr2 60633909 60634062 -192622521 + MIR SINE MIR 104 259 -3 30 0 0 0 chr2 60634265 60634295 -192622288 + AT_rich Low_complexity Low_complexity 1 30 0 182 214 0 24 chr2 60636838 60636880 -192619703 - MIR3 SINE MIR -12 196 156 29 70 0 0 chr2 60637165 60637222 -192619361 + AT_rich Low_complexity Low_complexity 1 57 0 2459 68 0 3 chr2 60640655 60640963 -192615620 - AluY SINE Alu -4 307 1 301 314 197 24 chr2 60641457 60641747 -192614836 - L1MC/D LINE L1 -1986 5822 5483 672 239 61 15 chr2 60642046 60642243 -192614340 + MLT1A1 LTR MaLR 118 323 -42 1054 115 44 0 chr2 60643204 60643387 -192613196 - L1MA6 LINE L1 0 6300 6110 2090 117 0 44 chr2 60643398 60643715 -192612868 + AluSx SINE Alu 1 303 -9 269 239 14 14 chr2 60645040 60645111 -192611472 - MER63 DNA MER1_type -1 1061 991 710 187 24 0 chr2 60645121 60645244 -192611339 - MER63 DNA MER1_type -309 753 2 2478 117 17 6 chr2 60645269 60645629 -192610954 - THE1B LTR MaLR 0 364 1 277 270 70 9 chr2 60646655 60646770 -192609813 - L1ME3A LINE L1 -89 6150 6029 962 298 55 45 chr2 60646779 60647662 -192608921 - L1ME3A LINE L1 -313 5918 5020 947 270 52 52 chr2 60647685 60648321 -192608262 - L1ME3A LINE L1 -1758 4457 3822 1444 290 66 23 chr2 60648324 60649273 -192607310 - L1ME3A LINE L1 -2475 3740 2751 367 275 52 10 chr2 60649450 60649643 -192606940 - L1ME3A LINE L1 -4050 2346 2146 499 301 0 65 chr2 60649651 60649867 -192606716 - L1ME3A LINE L1 -4660 1736 1535 22 0 0 0 chr2 60650220 60650242 -192606341 + AT_rich Low_complexity Low_complexity 1 22 0 710 295 85 61 chr2 60650578 60651073 -192605510 - LTR33 LTR ERVL 0 521 15 255 367 53 20 chr2 60651962 60652112 -192604471 + MIR SINE MIR 1 155 -107 1173 301 132 33 chr2 60653192 60654137 -192602446 - L2 LINE L2 0 3313 2260 472 206 35 0 chr2 60654509 60654632 -192601951 - MER3 DNA MER1_type -86 123 11 444 339 109 8 chr2 60654910 60655158 -192601425 + MLT1I LTR MaLR 72 344 -65 263 275 75 0 chr2 60655192 60655272 -192601311 - MLT1J2 LTR MaLR -30 420 335 193 309 0 18 chr2 60656385 60656440 -192600143 - L2 LINE L2 0 3272 3219 321 68 0 0 chr2 60658599 60658643 -192597940 + (CA)n Simple_repeat Simple_repeat 2 45 0 327 246 132 24 chr2 60658649 60658816 -192597767 + L1MC4a LINE L1 7143 7327 -481 3187 210 81 19 chr2 60658904 60660116 -192596467 - L1MB8 LINE L1 -2 6176 4892 3470 26 2 2 chr2 60660116 60660533 -192596050 - L1PA2 LINE L1 0 6155 5739 2627 52 15 6 chr2 60660533 60660835 -192595748 + L1PA2 LINE L1 5422 5729 -426 479 265 82 55 chr2 60660791 60661082 -192595501 - L1MB8 LINE L1 -1204 4942 4644 * 1941 153 3 0 chr2 60661090 60661378 -192595205 - AluSx SINE Alu -23 289 1 5539 123 19 8 chr2 60661412 60662405 -192594178 - L1PB1 LINE L1 -4 6147 5142 1152 187 9 23 chr2 60663412 60663631 -192592952 + AluJo SINE Alu 5 220 -92 371 42 0 0 chr2 60663631 60663679 -192592904 + AluY SINE Alu 84 131 -170 319 277 58 50 chr2 60664350 60664481 -192592102 - L1MC/D LINE L1 -360 5804 5690 291 301 85 32 chr2 60664525 60664771 -192591812 - L1MC/D LINE L1 -544 5577 5319 1771 103 19 4 chr2 60664896 60665167 -192591416 + L1PA13 LINE L1 5886 6160 -3 432 82 0 16 chr2 60666651 60666712 -192589871 - LTR3b LTR ERVK -440 60 1 732 331 25 4 chr2 60667232 60667510 -192589073 + LTR16A LTR ERVL 167 450 0 923 320 46 22 chr2 60667582 60667995 -192588588 + HERV16 LTR ERVL 92 514 -4482 1002 305 64 16 chr2 60668223 60668659 -192587924 + HERV16 LTR ERVL 755 1211 -3785 1212 324 68 14 chr2 60668690 60669394 -192587189 + HERV16 LTR ERVL 2598 3397 -2088 377 316 51 35 chr2 60669908 60670164 -192586419 + ERVL LTR ERVL 5051 5310 -454 766 334 43 35 chr2 60670389 60670811 -192585772 + LTR16A LTR ERVL 26 450 0 352 354 21 16 chr2 60670811 60671003 -192585580 + L1M4 LINE L1 4489 4681 -1465 2106 49 0 0 chr2 60671939 60672202 -192584381 - L1PA4 LINE L1 -3 6152 5890 207 135 54 0 chr2 60673561 60673598 -192582985 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 2940 143 88 10 chr2 60673921 60674503 -192582080 + L1MA8 LINE L1 5645 6271 -20 13472 228 18 17 chr2 60674507 60678513 -192578070 - L1PA16 LINE L1 -9 6808 2777 3763 101 0 4 chr2 60678513 60679026 -192577557 - MER9 LTR ERVK 0 511 1 13472 228 18 17 chr2 60679026 60680317 -192576266 - L1PA16 LINE L1 -4040 2777 1489 427 331 7 7 chr2 60681170 60681324 -192575259 - L1PA16 LINE L1 -5270 1517 1364 589 350 38 48 chr2 60681374 60681869 -192574714 - L1PA16 LINE L1 -6206 581 92 197 330 211 18 chr2 60682091 60682370 -192574213 - L2 LINE L2 -149 3164 2832 250 313 42 0 chr2 60682553 60682649 -192573934 - L2 LINE L2 -790 2524 2425 40 21 0 0 chr2 60683060 60683107 -192573476 + AT_rich Low_complexity Low_complexity 1 47 0 663 242 52 36 chr2 60684092 60684286 -192572297 - MLT1G LTR MaLR 0 590 394 1743 173 28 0 chr2 60684413 60684702 -192571881 - AluJo SINE Alu -15 297 1 413 284 193 47 chr2 60684721 60685017 -192571566 - MLT1G LTR MaLR -237 353 15 706 298 77 8 chr2 60685548 60685783 -192570800 - MIR SINE MIR -11 251 1 204 67 0 0 chr2 60687545 60687575 -192569008 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2396 84 0 0 chr2 60687815 60688113 -192568470 - AluSc SINE Alu -11 298 1 197 196 20 0 chr2 60689009 60689060 -192567523 + GA-rich Low_complexity Low_complexity 2 53 0 233 269 48 67 chr2 60693577 60693681 -192562902 + MIR SINE MIR 16 117 -91 236 315 55 55 chr2 60694322 60694449 -192562134 + MER5B DNA MER1_type 1 127 -51 2191 119 0 0 chr2 60695554 60695864 -192560719 - AluY SINE Alu -1 310 1 385 284 126 36 chr2 60696523 60696801 -192559782 - L1M4 LINE L1 -2158 3988 3686 2026 172 71 12 chr2 60696871 60697279 -192559304 - MSTB1 LTR MaLR 0 432 1 247 146 0 0 chr2 60697652 60697693 -192558890 + L1MB3 LINE L1 4783 4823 -1323 4664 187 36 19 chr2 60697793 60699143 -192557440 + L1MB3 LINE L1 4821 6182 -1 366 355 74 5 chr2 60699213 60699416 -192557167 + MIR SINE MIR 31 247 -15 806 98 0 8 chr2 60699661 60699784 -192556799 + (GAAA)n Simple_repeat Simple_repeat 3 124 0 2265 98 0 3 chr2 60701212 60701507 -192555076 + AluSq SINE Alu 2 295 -18 259 312 112 32 chr2 60701765 60701890 -192554693 + MIR SINE MIR 51 185 -77 49 71 0 0 chr2 60703031 60703129 -192553454 + AT_rich Low_complexity Low_complexity 1 98 0 187 296 82 20 chr2 60705429 60705527 -192551056 + MIR SINE MIR 105 208 -54 1711 57 0 5 chr2 60706133 60706343 -192550240 + AluY SINE Alu 98 306 -5 1888 122 4 4 chr2 60707594 60707865 -192548718 + AluY SINE Alu 1 271 -40 234 236 0 69 chr2 60708814 60708886 -192547697 - MIR SINE MIR -16 246 180 2007 158 64 40 chr2 60709174 60709682 -192546901 - MLT2A2 LTR ERVL 0 515 1 591 221 43 95 chr2 60710058 60710289 -192546294 + MLT1J LTR MaLR 230 448 -63 278 341 94 24 chr2 60710349 60710519 -192546064 - MIR SINE MIR -59 203 22 526 308 41 6 chr2 60711347 60711519 -192545064 + MIR SINE MIR 3 180 -82 513 236 146 0 chr2 60711519 60711629 -192544954 + FLAM_A SINE Alu 1 126 -7 243 329 0 0 chr2 60713083 60713165 -192543418 + (TA)n Simple_repeat Simple_repeat 2 83 0 310 213 53 0 chr2 60715756 60715831 -192540752 + MER116 DNA Mariner 1 79 -1 193 164 30 119 chr2 60715912 60715979 -192540604 - L2 LINE L2 -3 3310 3250 968 114 34 2 chr2 60717145 60717384 -192539199 + GA-rich Low_complexity Low_complexity 2 425 0 24 67 0 0 chr2 60719803 60719848 -192536735 + AT_rich Low_complexity Low_complexity 1 45 0 1827 168 129 8 chr2 60723179 60723566 -192533017 - Tigger2a DNA MER2_type 0 434 1 916 223 22 27 chr2 60725139 60725363 -192531220 - MER58A DNA MER1_type -1 223 1 224 130 11 98 chr2 60726336 60726428 -192530155 + (TATAA)n Simple_repeat Simple_repeat 1 84 0 22 0 0 0 chr2 60727031 60727053 -192529530 + AT_rich Low_complexity Low_complexity 1 22 0 1438 16 0 22 chr2 60727708 60727891 -192528692 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 1031 182 17 0 chr2 60728195 60728376 -192528207 - MER5A DNA MER1_type -1 188 5 396 0 0 0 chr2 60728785 60728829 -192527754 + (TG)n Simple_repeat Simple_repeat 2 45 0 331 298 57 94 chr2 60730181 60730446 -192526137 + MIR SINE MIR 8 262 0 339 25 0 0 chr2 60730504 60730544 -192526039 + (CA)n Simple_repeat Simple_repeat 1 40 0 197 219 0 16 chr2 60732566 60732630 -192523953 + GA-rich Low_complexity Low_complexity 2 64 0 207 139 0 0 chr2 60732994 60733030 -192523553 + (T)n Simple_repeat Simple_repeat 1 36 0 1180 242 29 72 chr2 60733978 60734474 -192522109 + MER39 LTR ERV1 6 662 -45 2060 131 3 3 chr2 60735039 60735345 -192521238 - AluSx SINE Alu -2 310 5 1614 211 16 16 chr2 60735392 60735762 -192520821 - MLT1C LTR MaLR -4 463 94 2042 195 46 18 chr2 60735808 60736308 -192520275 + L1MA9 LINE L1 5761 6277 -35 280 314 98 55 chr2 60736478 60736714 -192519869 - L2 LINE L2 -468 2846 2601 2966 130 14 2 chr2 60738303 60738786 -192517797 - L1M2 LINE L1 -511 5780 5292 1047 266 24 18 chr2 60738793 60739176 -192517407 - L1 LINE L1 -2468 3678 3294 265 276 76 5 chr2 60739235 60739445 -192517138 + L1M4 LINE L1 3128 3352 -2794 371 272 95 25 chr2 60739967 60740250 -192516333 - L1M4 LINE L1 -2502 3644 3342 350 283 51 14 chr2 60740342 60740480 -192516103 - L1M4 LINE L1 -2927 3219 3077 2388 80 0 6 chr2 60740582 60740893 -192515690 + AluY SINE Alu 1 309 -2 9643 111 19 35 chr2 60741187 60742884 -192513699 + L1P LINE L1 1783 3451 -2695 9537 101 15 74 chr2 60743097 60743949 -192512634 - L1P LINE L1 -1558 4588 3891 808 11 0 0 chr2 60743949 60744039 -192512544 - L1PA5 LINE L1 -18 6136 6047 9537 101 15 74 chr2 60744039 60744951 -192511632 - L1P LINE L1 -2255 3891 2927 1593 272 77 7 chr2 60745093 60745652 -192510931 - L1MC4 LINE L1 -977 7065 6468 955 210 99 89 chr2 60745684 60746079 -192510504 + L1MC4 LINE L1 7349 7747 -295 300 229 0 14 chr2 60746057 60746127 -192510456 + L1MC4 LINE L1 7953 8021 -21 * 1715 149 29 13 chr2 60746366 60746675 -192509908 - L1PA16 LINE L1 -9 6157 5844 22 0 0 0 chr2 60746782 60746804 -192509779 + AT_rich Low_complexity Low_complexity 1 22 0 9540 96 12 28 chr2 60747228 60749224 -192507359 - L1P3 LINE L1 -4326 2135 172 237 206 32 16 chr2 60749329 60749392 -192507191 + CT-rich Low_complexity Low_complexity 4 67 0 21 0 0 0 chr2 60750471 60750492 -192506091 + AT_rich Low_complexity Low_complexity 1 21 0 785 206 144 89 chr2 60750789 60751172 -192505411 + L1MC5 LINE L1 7164 7567 -394 1302 258 69 22 chr2 60752092 60752976 -192503607 + L1M2c LINE L1 2689 3557 -4008 788 133 49 0 chr2 60752992 60753135 -192503448 + L1MA5A LINE L1 6142 6291 -6 730 296 0 9 chr2 60753158 60753378 -192503205 - L1M4 LINE L1 -2544 5021 4804 4020 189 41 24 chr2 60753405 60754186 -192502397 - MER52A LTR ERV1 0 1755 962 254 297 0 0 chr2 60754216 60754307 -192502276 + C-rich Low_complexity Low_complexity 1 91 0 10746 167 52 14 chr2 60754430 60757440 -192499143 - L1M4 LINE L1 -2890 4675 1555 334 231 19 19 chr2 60757558 60757714 -192498869 + (CCCA)n Simple_repeat Simple_repeat 2 157 0 230 139 47 62 chr2 60757666 60757795 -192498788 + (CACAC)n Simple_repeat Simple_repeat 5 131 0 * 992 267 35 56 chr2 60757908 60758185 -192498398 - L1M4c LINE L1 -4798 2310 2154 1813 99 8 0 chr2 60758185 60758427 -192498156 - AluSp SINE Alu -4 309 66 992 267 35 56 chr2 60758427 60758784 -192497799 - L1M4c LINE L1 -4954 2154 1791 1975 280 50 32 chr2 60758784 60759503 -192497080 - L1M4c LINE L1 -6298 732 1 361 279 142 0 chr2 60764367 60764550 -192492033 + MIR SINE MIR 35 243 -19 21 0 0 0 chr2 60764635 60764656 -192491927 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr2 60765437 60765468 -192491115 + AT_rich Low_complexity Low_complexity 1 31 0 1034 161 13 61 chr2 60766195 60766425 -192490158 - MER20 DNA MER1_type 0 219 1 1945 88 0 4 chr2 60766833 60767083 -192489500 - AluSc SINE Alu -5 304 56 221 222 28 56 chr2 60767329 60767401 -192489182 + CT-rich Low_complexity Low_complexity 1 70 0 2102 85 31 3 chr2 60767809 60768126 -192488457 + L1PA10 LINE L1 5843 6168 0 357 310 128 30 chr2 60768332 60768535 -192488048 + L1ME3 LINE L1 4795 5017 -1129 112 16 0 0 chr2 60768575 60768701 -192487882 + AT_rich Low_complexity Low_complexity 1 126 0 1297 172 5 9 chr2 60768701 60768916 -192487667 - AluJo SINE Alu -98 214 1 865 269 47 13 chr2 60768963 60769450 -192487133 + L1ME3 LINE L1 5042 5540 -626 298 283 10 10 chr2 60769445 60769544 -192487039 + L1ME3 LINE L1 6064 6162 0 * 703 77 0 0 chr2 60770450 60770541 -192486042 - MER46B DNA MER2_type 0 236 146 206 189 0 19 chr2 60770547 60770600 -192485983 + (TATATG)n Simple_repeat Simple_repeat 3 54 0 1249 175 73 22 chr2 60770600 60770874 -192485709 - MER46B DNA MER2_type -73 163 1 233 141 141 64 chr2 60770814 60770892 -192485691 + MER46A DNA MER2_type 78 161 -75 * 266 336 112 9 chr2 60770972 60771079 -192485504 + L2 LINE L2 3154 3271 -1 210 275 110 0 chr2 60771877 60771968 -192484615 - MIR SINE MIR -49 213 113 193 243 0 0 chr2 60772640 60772677 -192483906 - L2 LINE L2 -10 3262 3226 192 152 0 0 chr2 60772931 60772964 -192483619 + (CA)n Simple_repeat Simple_repeat 2 34 0 24 0 0 0 chr2 60772978 60773002 -192483581 + AT_rich Low_complexity Low_complexity 1 24 0 1525 141 0 0 chr2 60773427 60773654 -192482929 + AluSg/x SINE Alu 81 307 -3 305 339 35 0 chr2 60775713 60775828 -192480755 - MIR SINE MIR -91 171 53 696 307 91 22 chr2 60777593 60778240 -192478343 - L1ME3A LINE L1 -219 5951 5259 570 276 147 36 chr2 60778268 60778847 -192477736 - L1ME3A LINE L1 -874 5272 4630 22 70 0 0 chr2 60778956 60778999 -192477584 + AT_rich Low_complexity Low_complexity 1 43 0 874 124 15 0 chr2 60779239 60779376 -192477207 + THE1C LTR MaLR 237 375 0 3070 98 7 9 chr2 60779387 60779827 -192476756 + THE1C-int LTR MaLR 1142 1580 0 1902 153 35 50 chr2 60779832 60780264 -192476319 + THE1C LTR MaLR 5 428 0 824 218 23 9 chr2 60780279 60780499 -192476084 + L1MC4 LINE L1 7079 7301 -741 21 36 0 0 chr2 60780715 60780743 -192475840 + AT_rich Low_complexity Low_complexity 1 28 0 28 61 0 0 chr2 60781142 60781191 -192475392 + AT_rich Low_complexity Low_complexity 1 49 0 4363 207 25 25 chr2 60781204 60781266 -192475317 + L1MC3 LINE L1 5767 5828 -1957 2195 121 0 0 chr2 60781266 60781572 -192475011 + AluSq SINE Alu 1 306 -7 4363 207 25 25 chr2 60781572 60782613 -192473970 + L1MC3 LINE L1 5828 6829 -956 281 256 0 78 chr2 60782982 60783072 -192473511 - MER117 DNA MER1_type -5 192 110 928 106 53 0 chr2 60783199 60783350 -192473233 - HSMAR2 DNA Mariner -1143 159 1 372 320 0 27 chr2 60783573 60783723 -192472860 + C-rich Low_complexity Low_complexity 3 148 0 22 0 0 0 chr2 60785659 60785681 -192470902 + AT_rich Low_complexity Low_complexity 1 22 0 395 319 128 0 chr2 60786302 60786443 -192470140 + MIR3 SINE MIR 4 162 -46 225 94 0 0 chr2 60787726 60787758 -192468825 + (T)n Simple_repeat Simple_repeat 1 32 0 409 250 115 0 chr2 60789208 60789312 -192467271 + MIR SINE MIR 71 186 -76 3925 233 131 112 chr2 60791062 60792027 -192464556 - L1MD3 LINE L1 0 7995 7050 1290 138 29 9 chr2 60792027 60792237 -192464346 + MER30 DNA MER1_type 17 230 0 3925 233 131 112 chr2 60792237 60793483 -192463100 - L1MD3 LINE L1 -945 7050 5529 281 293 90 30 chr2 60793511 60793644 -192462939 - MIR SINE MIR -109 153 13 536 301 59 20 chr2 60795324 60795527 -192461056 - MIR SINE MIR -32 230 20 554 268 144 13 chr2 60795767 60796066 -192460517 + L1ME4a LINE L1 5539 5876 -245 21 57 0 0 chr2 60797356 60797391 -192459192 + AT_rich Low_complexity Low_complexity 1 35 0 298 330 10 10 chr2 60798118 60798215 -192458368 + MER58 DNA MER1_type 1 97 -118 248 268 0 28 chr2 60798231 60798302 -192458281 + GA-rich Low_complexity Low_complexity 3 71 0 1938 101 72 7 chr2 60799321 60799597 -192456986 + AluSx SINE Alu 1 294 -18 21 0 0 0 chr2 60800194 60800215 -192456368 + AT_rich Low_complexity Low_complexity 1 21 0 631 300 77 6 chr2 60800675 60800917 -192455666 + MIR SINE MIR 4 262 0 1929 127 141 0 chr2 60801688 60802043 -192454540 + L1MA8 LINE L1 5885 6289 -2 219 327 13 20 chr2 60802057 60802207 -192454376 - L2 LINE L2 -1214 2100 1952 1395 212 130 47 chr2 60805106 60805644 -192450939 - MER34C LTR ERV1 -2 583 1 497 313 95 9 chr2 60805680 60805891 -192450692 - MIR SINE MIR -32 230 2 1578 183 119 6 chr2 60806333 60806661 -192449922 + MLT1A1 LTR MaLR 1 365 0 2992 195 110 47 chr2 60807987 60809105 -192447478 - L1M1 LINE L1 -6261 1304 16 1436 212 52 53 chr2 60809432 60809954 -192446629 - MER39 LTR ERV1 0 683 1 24 53 0 0 chr2 60810042 60810080 -192446503 + AT_rich Low_complexity Low_complexity 1 38 0 2838 225 54 6 chr2 60812782 60813450 -192443133 + L1ME1 LINE L1 5462 6161 -5 1704 195 0 0 chr2 60815398 60815701 -192440882 + AluJb SINE Alu 1 303 -9 451 314 88 30 chr2 60815910 60816864 -192439719 - L1MEd LINE L1 -4661 1649 603 246 303 98 65 chr2 60817070 60817437 -192439146 - L1MEd LINE L1 -5737 382 4 988 214 0 57 chr2 60817589 60817799 -192438784 - MER58A DNA MER1_type -26 198 1 276 30 0 0 chr2 60818884 60818917 -192437666 + (TG)n Simple_repeat Simple_repeat 1 33 0 366 198 44 22 chr2 60819155 60819246 -192437337 - MER34C LTR ERV1 -2 583 491 259 287 69 40 chr2 60819379 60819480 -192437103 + MER5A DNA MER1_type 9 112 -77 387 317 184 17 chr2 60820425 60820964 -192435619 + L1ME4a LINE L1 5290 5918 -203 7242 125 15 6 chr2 60821415 60822941 -192433642 - L1MA1 LINE L1 0 6302 4764 928 163 139 5 chr2 60822934 60823143 -192433440 - L1MA1 LINE L1 -1798 4348 4112 * 257 290 81 32 chr2 60828703 60828827 -192427756 + MER94 DNA DNA 5 134 0 1181 187 30 122 chr2 60830680 60831082 -192425501 + MLT1A1 LTR MaLR 1 365 0 432 321 93 41 chr2 60831550 60831840 -192424743 + L1MEd LINE L1 593 897 -5222 25 31 0 0 chr2 60831995 60832027 -192424556 + AT_rich Low_complexity Low_complexity 1 32 0 212 100 25 0 chr2 60832109 60832149 -192424434 + (TA)n Simple_repeat Simple_repeat 2 42 0 1974 151 3 3 chr2 60832667 60832971 -192423612 + AluSx SINE Alu 1 304 -8 234 214 111 34 chr2 60833128 60833245 -192423338 + L1MEd LINE L1 889 1014 -5105 382 306 83 34 chr2 60833343 60833811 -192422772 + L1MEd LINE L1 1179 1669 -4641 215 330 0 0 chr2 60834016 60834110 -192422473 + A-rich Low_complexity Low_complexity 1 94 0 245 235 35 0 chr2 60834217 60834302 -192422281 + L1M4 LINE L1 4196 4283 -1863 1301 215 18 32 chr2 60834302 60834581 -192422002 + AluJo SINE Alu 1 275 -37 201 74 0 0 chr2 60834588 60834615 -192421968 + (TTAA)n Simple_repeat Simple_repeat 1 27 0 381 277 89 28 chr2 60834624 60834985 -192421598 + L1M4 LINE L1 4287 4669 -1477 307 351 89 13 chr2 60834986 60835211 -192421372 + L1M4 LINE L1 4702 4943 -1203 22 0 0 0 chr2 60835753 60835775 -192420808 + AT_rich Low_complexity Low_complexity 1 22 0 374 287 67 51 chr2 60836000 60836254 -192420329 + L1MEc LINE L1 1005 1262 -5134 244 311 28 0 chr2 60836269 60836375 -192420208 + L1MEc LINE L1 1494 1602 -4794 * 463 271 181 27 chr2 60836368 60837007 -192419576 + L1MEc LINE L1 2672 3409 -2806 232 356 164 5 chr2 60837059 60837267 -192419316 + L1MEc LINE L1 131 371 -6025 990 291 82 53 chr2 60837651 60838651 -192417932 + L1MEc LINE L1 691 1763 -4633 578 243 126 19 chr2 60838696 60838910 -192417673 + L1MEc LINE L1 2720 2956 -3259 320 322 75 11 chr2 60838959 60839133 -192417450 + L1MEc LINE L1 3489 3673 -2542 673 242 68 73 chr2 60839161 60839557 -192417026 + L1MEc LINE L1 2252 2645 -3570 27 0 0 0 chr2 60839826 60839853 -192416730 + AT_rich Low_complexity Low_complexity 1 27 0 23 0 0 0 chr2 60839993 60840016 -192416567 + AT_rich Low_complexity Low_complexity 1 23 0 1599 261 41 23 chr2 60840072 60840559 -192416024 + MLT1D LTR MaLR 1 496 -9 537 278 61 90 chr2 60840620 60841209 -192415374 + L1MEc LINE L1 3351 3922 -2293 1376 199 0 11 chr2 60841210 60841482 -192415101 + AluJb SINE Alu 36 304 -8 5636 241 32 23 chr2 60841484 60841824 -192414759 + L1MC1 LINE L1 3514 3850 -2296 973 177 199 48 chr2 60841824 60842196 -192414387 - MSTC LTR MaLR 0 428 1 5636 241 32 23 chr2 60842196 60843561 -192413022 + L1MC1 LINE L1 3850 5234 -912 2866 223 45 10 chr2 60843672 60844390 -192412193 + L1MC1 LINE L1 5254 5996 -337 2445 253 24 10 chr2 60844901 60845612 -192410971 + L1MC1 LINE L1 5612 6332 -1 8447 214 49 45 chr2 60845698 60848274 -192408309 + L1M2 LINE L1 2750 5330 -1518 2205 109 0 0 chr2 60848562 60848865 -192407718 - AluSx SINE Alu -9 303 1 26 0 0 0 chr2 60849496 60849522 -192407061 + AT_rich Low_complexity Low_complexity 1 26 0 1197 261 90 0 chr2 60850205 60850516 -192406067 - MLT1A1 LTR MaLR -2 363 25 316 222 33 22 chr2 60850728 60850818 -192405765 + MIR SINE MIR 172 262 0 291 219 134 70 chr2 60851705 60851906 -192404677 - L1ME3A LINE L1 -1 6169 5956 1459 274 82 60 chr2 60852002 60853022 -192403561 - L1MC5 LINE L1 -444 7517 6476 409 275 53 23 chr2 60854511 60854642 -192401941 + MIR SINE MIR 20 154 -108 24 85 0 0 chr2 60854991 60855050 -192401533 + AT_rich Low_complexity Low_complexity 1 59 0 21 0 0 0 chr2 60855384 60855405 -192401178 + AT_rich Low_complexity Low_complexity 1 21 0 442 335 130 5 chr2 60859048 60859248 -192397335 + MIR SINE MIR 34 258 -4 24 32 0 0 chr2 60859711 60859742 -192396841 + AT_rich Low_complexity Low_complexity 1 31 0 339 306 15 65 chr2 60860192 60860391 -192396192 - LTR16C LTR ERVL 0 491 303 28 0 0 0 chr2 60861074 60861102 -192395481 + AT_rich Low_complexity Low_complexity 1 28 0 1976 276 94 17 chr2 60861208 60862207 -192394376 + L1ME LINE L1 3821 4896 -1250 736 223 59 37 chr2 60862234 60862500 -192394083 + L1ME2 LINE L1 5627 6122 -42 749 282 41 29 chr2 60862517 60862928 -192393655 + L1ME LINE L1 4910 5325 -821 646 309 23 19 chr2 60862939 60863204 -192393379 + L1ME LINE L1 5366 5631 -539 216 0 0 0 chr2 60863897 60863921 -192392662 + (TA)n Simple_repeat Simple_repeat 1 24 0 4931 67 11 2 chr2 60863927 60864559 -192392024 - L1PA7 LINE L1 -20 6134 5497 30 45 0 0 chr2 60864618 60864662 -192391921 + AT_rich Low_complexity Low_complexity 1 44 0 373 290 116 13 chr2 60865253 60865408 -192391175 - MIR SINE MIR -13 249 79 1791 142 3 17 chr2 60865439 60865735 -192390848 + AluSx SINE Alu 11 302 -10 2304 90 7 3 chr2 60865930 60866240 -192390343 + AluSx SINE Alu 1 311 -1 243 218 0 18 chr2 60866373 60866428 -192390155 + L2 LINE L2 2594 2647 -667 911 220 70 77 chr2 60867210 60867510 -192389073 - MLT1A1 LTR MaLR 0 365 68 9920 141 36 20 chr2 60867518 60868928 -192387655 + Tigger1 DNA MER2_type 24 1468 -950 1978 133 3 0 chr2 60868928 60869236 -192387347 - AluSq SINE Alu 0 309 1 9920 141 36 20 chr2 60869236 60869500 -192387083 + Tigger1 DNA MER2_type 1468 1726 -692 629 160 0 9 chr2 60869476 60869582 -192387001 + Tigger1 DNA MER2_type 2313 2417 -1 * 189 0 0 0 chr2 60869970 60869991 -192386592 + (T)n Simple_repeat Simple_repeat 1 21 0 354 23 0 0 chr2 60872099 60872142 -192384441 + (TG)n Simple_repeat Simple_repeat 2 44 0 265 267 164 41 chr2 60872584 60872730 -192383853 + L1ME1 LINE L1 5922 6085 -81 4186 120 22 5 chr2 60872885 60873529 -192383054 + L1PA15 LINE L1 5506 6160 -5 478 223 145 66 chr2 60875175 60875235 -192381348 + MER5A DNA MER1_type 11 65 -124 442 52 0 78 chr2 60875235 60875312 -192381271 + L1PA6 LINE L1 6084 6154 0 478 223 145 66 chr2 60875312 60875417 -192381166 + MER5A DNA MER1_type 65 189 0 457 246 28 95 chr2 60875426 60875605 -192380978 + MER5B DNA MER1_type 12 178 0 2216 238 190 53 chr2 60876651 60877555 -192379028 + L1M4 LINE L1 24 1051 -5491 2517 193 19 75 chr2 60877555 60878224 -192378359 + LTR27 LTR ERV1 3 634 -2 2236 246 56 33 chr2 60878224 60878346 -192378237 + L1M4 LINE L1 1044 1162 -5663 1593 245 13 55 chr2 60878346 60878873 -192377710 - MLT1D LTR MaLR 0 505 1 2236 246 56 33 chr2 60878873 60880056 -192376527 + L1M4 LINE L1 1162 2518 -4307 4381 261 26 20 chr2 60880076 60881631 -192374952 + L1M4 LINE L1 2925 4488 -2156 1872 241 65 16 chr2 60882748 60882950 -192373633 + L1M4 LINE L1 4479 4670 -1974 1976 172 103 3 chr2 60882950 60883339 -192373244 - MSTA LTR MaLR 0 428 1 1872 241 65 16 chr2 60883339 60883771 -192372812 + L1M4 LINE L1 4670 5144 -1500 524 206 0 26 chr2 60883768 60883923 -192372660 + L1P LINE L1 4982 5132 -1014 * 207 281 16 16 chr2 60885337 60885401 -192371182 - MER5B DNA MER1_type -35 143 80 207 0 0 0 chr2 60885983 60886006 -192370577 + (A)n Simple_repeat Simple_repeat 1 23 0 453 265 0 17 chr2 60887793 60887910 -192368673 + L2 LINE L2 3199 3313 0 344 357 169 15 chr2 60887952 60888514 -192368069 + L2 LINE L2 2618 3266 -6 730 264 35 0 chr2 60888591 60888788 -192367795 + MIR SINE MIR 56 259 -3 191 254 102 0 chr2 60889917 60889976 -192366607 + L2 LINE L2 2299 2363 -951 23 78 0 0 chr2 60890041 60890092 -192366491 + AT_rich Low_complexity Low_complexity 1 51 0 457 204 61 68 chr2 60893966 60894098 -192362485 + MIR SINE MIR 73 203 -59 1978 176 42 22 chr2 60894175 60894625 -192361958 - L1MA3 LINE L1 0 6305 5847 327 365 28 35 chr2 60895284 60895429 -192361154 + MIR3 SINE MIR 17 160 -48 580 228 152 6 chr2 60895429 60895587 -192360996 - MER5A DNA MER1_type 0 189 9 206 273 79 86 chr2 60895751 60895890 -192360693 - MIR3 SINE MIR -47 161 24 23 0 0 0 chr2 60895993 60896016 -192360567 + AT_rich Low_complexity Low_complexity 1 23 0 25 51 0 0 chr2 60897606 60897645 -192358938 + AT_rich Low_complexity Low_complexity 1 39 0 422 36 18 0 chr2 60899268 60899324 -192357259 + (TA)n Simple_repeat Simple_repeat 1 57 0 207 179 0 0 chr2 60901507 60901546 -192355037 + (TTCA)n Simple_repeat Simple_repeat 3 41 0 22 0 0 0 chr2 60904038 60904060 -192352523 + AT_rich Low_complexity Low_complexity 1 22 0 1831 176 26 41 chr2 60904116 60904532 -192352051 - L1MA9 LINE L1 -38 6274 5865 366 23 0 0 chr2 60905141 60905184 -192351399 + (CA)n Simple_repeat Simple_repeat 2 44 0 288 0 0 0 chr2 60905898 60905930 -192350653 + (A)n Simple_repeat Simple_repeat 1 32 0 219 36 0 0 chr2 60906605 60906633 -192349950 + (CA)n Simple_repeat Simple_repeat 1 28 0 823 116 58 0 chr2 60907619 60907757 -192348826 - L1MA9 LINE L1 0 6312 6167 306 0 0 0 chr2 60907761 60907795 -192348788 + (TG)n Simple_repeat Simple_repeat 1 34 0 234 132 0 0 chr2 60907821 60907889 -192348694 + L1MA7 LINE L1 6121 6156 -135 6844 150 27 4 chr2 60907911 60910146 -192346437 - L1MA3 LINE L1 -1 6304 4017 297 0 0 0 chr2 60910852 60910885 -192345698 + (A)n Simple_repeat Simple_repeat 1 33 0 241 244 24 12 chr2 60912227 60912309 -192344274 + (TA)n Simple_repeat Simple_repeat 1 83 0 24 0 0 0 chr2 60913559 60913583 -192343000 + AT_rich Low_complexity Low_complexity 1 24 0 2425 71 3 0 chr2 60913784 60914093 -192342490 + AluY SINE Alu 1 310 -1 905 243 72 61 chr2 60915103 60915636 -192340947 + MLT1G LTR MaLR 5 521 -34 267 306 0 0 chr2 60915652 60915714 -192340869 - L2 LINE L2 0 3313 3252 509 307 25 50 chr2 60916870 60917009 -192339574 - MIR SINE MIR -10 252 120 2307 90 0 13 chr2 60917009 60917320 -192339263 - AluSg SINE Alu -3 307 1 509 307 25 50 chr2 60917320 60917418 -192339165 - MIR SINE MIR -142 120 21 314 290 78 67 chr2 60917433 60917626 -192338957 - L3 LINE CR1 -16 1561 1367 208 346 47 9 chr2 60917783 60917890 -192338693 + L2 LINE L2 2942 3052 -220 1252 259 29 26 chr2 60918907 60919258 -192337325 + MER93a LTR ERV1 51 402 0 241 326 54 0 chr2 60921116 60921208 -192335375 + MIR SINE MIR 71 167 -95 504 190 100 0 chr2 60921385 60921485 -192335098 - MER103 DNA DNA 0 166 57 297 216 0 0 chr2 60922004 60922055 -192334528 + L2 LINE L2 3255 3305 -8 1770 179 51 11 chr2 60922855 60923206 -192333377 + MLT1A1 LTR MaLR 1 365 0 296 281 120 65 chr2 60923232 60923449 -192333134 + MIR SINE MIR 21 249 -13 217 342 214 20 chr2 60924244 60924440 -192332143 + MIR SINE MIR 23 256 -6 1895 147 27 15 chr2 60925783 60926116 -192330467 + MER1B DNA MER1_type 1 337 0 2293 91 7 0 chr2 60926188 60926485 -192330098 + AluSp SINE Alu 4 302 -11 21 0 0 0 chr2 60926660 60926681 -192329902 + AT_rich Low_complexity Low_complexity 1 21 0 291 299 10 31 chr2 60926691 60926788 -192329795 - MIR SINE MIR -109 153 59 539 262 8 8 chr2 60926895 60927017 -192329566 + MIR SINE MIR 90 211 -51 207 318 95 0 chr2 60927462 60927525 -192329058 + MIR SINE MIR 85 153 -109 22 70 0 0 chr2 60929350 60929393 -192327190 + AT_rich Low_complexity Low_complexity 1 43 0 22476 151 28 40 chr2 60930988 60933096 -192323487 - L1 LINE L1 -2181 5384 3252 300 27 0 0 chr2 60933096 60933133 -192323450 + (TG)n Simple_repeat Simple_repeat 2 38 0 22476 151 28 40 chr2 60933133 60933377 -192323206 - L1 LINE L1 -4313 3252 3007 1801 132 4 0 chr2 60933377 60933642 -192322941 - AluSg SINE Alu -15 295 30 22476 151 28 40 chr2 60933642 60936734 -192319849 - L1 LINE L1 -4558 3007 16 3927 175 30 45 chr2 60936739 60938241 -192318342 - L1MA9 LINE L1 -210 6166 4690 3631 232 55 13 chr2 60938253 60939396 -192317187 - L1MA9 LINE L1 -2451 3759 2569 2278 95 10 0 chr2 60939400 60939696 -192316887 - AluSc SINE Alu -2 307 9 3324 253 53 19 chr2 60939701 60941586 -192314997 - L1MA9 LINE L1 -3877 2333 662 1757 255 108 19 chr2 60941684 60942155 -192314428 - L1MA9 LINE L1 -5618 523 11 450 103 0 77 chr2 60942600 60942720 -192313863 - AluSp/q SINE Alu 0 324 211 21 57 0 0 chr2 60942721 60942756 -192313827 + AT_rich Low_complexity Low_complexity 1 35 0 183 156 0 0 chr2 60943438 60943470 -192313113 + CT-rich Low_complexity Low_complexity 1 32 0 2213 114 0 0 chr2 60943920 60944226 -192312357 - AluSg SINE Alu -4 306 1 210 318 191 36 chr2 60944385 60944495 -192312088 - L2 LINE L2 -5 3267 3141 189 154 0 0 chr2 60945159 60945198 -192311385 + GA-rich Low_complexity Low_complexity 3 41 0 2031 194 77 24 chr2 60946154 60946648 -192309935 - MLT2B1 LTR ERVL 0 520 1 21 0 0 0 chr2 60948277 60948298 -192308285 + AT_rich Low_complexity Low_complexity 1 21 0 1166 205 5 5 chr2 60949921 60950145 -192306438 - MER58A DNA MER1_type 0 224 1 2513 53 0 0 chr2 60950551 60950851 -192305732 + AluY SINE Alu 1 300 -11 518 306 16 33 chr2 60950980 60951163 -192305420 - MIR SINE MIR -25 237 58 25 0 0 0 chr2 60951345 60951370 -192305213 + AT_rich Low_complexity Low_complexity 1 25 0 312 266 13 0 chr2 60951716 60951795 -192304788 - MLT1I LTR MaLR -232 177 98 28 61 0 0 chr2 60952324 60952373 -192304210 + AT_rich Low_complexity Low_complexity 1 49 0 14673 125 20 32 chr2 60955333 60956908 -192299675 + Tigger1 DNA MER2_type 1 1594 -824 2212 112 3 3 chr2 60956908 60957212 -192299371 + AluSc SINE Alu 1 304 -5 14673 125 20 32 chr2 60957212 60957853 -192298730 + Tigger1 DNA MER2_type 1594 2187 -231 1223 209 20 57 chr2 60957853 60958154 -192298429 - AluJo SINE Alu -21 291 2 14673 125 20 32 chr2 60958154 60958384 -192298199 + Tigger1 DNA MER2_type 2187 2418 0 219 196 71 36 chr2 60958597 60958653 -192297930 - L2 LINE L2 -1 3271 3214 230 244 73 37 chr2 60958760 60958842 -192297741 - MIR SINE MIR -58 204 120 361 319 56 25 chr2 60960440 60960600 -192295983 - MIR3 SINE MIR -40 168 4 744 146 8 0 chr2 60961736 60961859 -192294724 + L1PA10 LINE L1 6040 6163 -5 1422 183 48 18 chr2 60962207 60962480 -192294103 + AluJo SINE Alu 1 281 -31 394 159 9 9 chr2 60963653 60963766 -192292817 + (TA)n Simple_repeat Simple_repeat 1 113 0 246 208 0 0 chr2 60964486 60964539 -192292044 + (TATATG)n Simple_repeat Simple_repeat 2 54 0 228 163 138 12 chr2 60964539 60964619 -192291964 - L1MC4 LINE L1 -1339 6703 6614 215 191 48 0 chr2 60966090 60966153 -192290430 + (TG)n Simple_repeat Simple_repeat 1 66 0 976 300 61 45 chr2 60967049 60967567 -192289016 - L2 LINE L2 0 3313 2793 292 228 139 0 chr2 60967573 60967652 -192288931 - MIR SINE MIR -171 91 2 1763 149 7 4 chr2 60967891 60968197 -192288386 + AluJb SINE Alu 1 307 0 336 277 12 0 chr2 60968263 60968346 -192288237 - MIR3 SINE MIR -20 188 105 1728 126 4 0 chr2 60968509 60968772 -192287811 - L1PA15 LINE L1 0 6165 5902 269 306 67 22 chr2 60969025 60969205 -192287378 + MIR3 SINE MIR 7 194 -14 196 267 100 33 chr2 60970052 60970142 -192286441 + L2 LINE L2 3060 3155 -158 2562 148 2 35 chr2 60970151 60970609 -192285974 - Tigger2 DNA MER2_type -3 2715 2273 384 176 0 15 chr2 60970601 60970669 -192285914 - Tigger2 DNA MER2_type -2651 67 1 * 2134 108 19 7 chr2 60970698 60971005 -192285578 + AluSx SINE Alu 1 311 -1 352 293 41 24 chr2 60971009 60971132 -192285451 + L2 LINE L2 3189 3313 0 537 255 28 52 chr2 60972165 60972377 -192284206 - LTR40b LTR ERVL -50 412 206 2167 52 0 0 chr2 60973205 60973475 -192283108 + L1PA7 LINE L1 5877 6146 -8 227 333 67 37 chr2 60973718 60973853 -192282730 + MIR3 SINE MIR 46 184 -24 227 326 47 12 chr2 60974601 60974687 -192281896 + HAL1b LINE L1 439 527 -821 31 82 0 0 chr2 60975512 60975585 -192280998 + AT_rich Low_complexity Low_complexity 1 73 0 277 246 44 38 chr2 60975594 60975850 -192280733 + L1M4 LINE L1 2956 3211 -2935 375 187 58 13 chr2 60976173 60976328 -192280255 + (TA)n Simple_repeat Simple_repeat 2 163 0 25 102 0 0 chr2 60976731 60976819 -192279764 + AT_rich Low_complexity Low_complexity 1 88 0 432 241 0 76 chr2 60976838 60976983 -192279600 - L1MC5 LINE L1 -101 7860 7727 567 220 101 12 chr2 60976983 60977151 -192279432 - L1MC5 LINE L1 -443 7518 7336 1172 189 65 15 chr2 60977173 60977649 -192278934 - MER68 LTR ERV1 -25 537 1 261 57 0 0 chr2 60977657 60977692 -192278891 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1192 259 176 43 chr2 60977747 60979395 -192277188 - L1MC5 LINE L1 -714 7247 5366 210 329 0 14 chr2 60980109 60980179 -192276404 - L2 LINE L2 -337 2976 2908 184 237 26 0 chr2 60980228 60980266 -192276317 - L2 LINE L2 -540 2774 2736 244 257 56 23 chr2 60980697 60980911 -192275672 + L1ME1 LINE L1 2944 3164 -2982 311 263 42 103 chr2 60981192 60981405 -192275178 + L1M4 LINE L1 2723 2922 -3224 483 155 0 0 chr2 60981471 60981555 -192275028 - MLT1E2 LTR MaLR 0 505 422 1058 214 41 22 chr2 60981583 60981854 -192274729 - L1PA16 LINE L1 -3 6163 5888 6880 215 12 14 chr2 60981855 60984190 -192272393 - L1PA15 LINE L1 -2 6814 4426 258 176 0 0 chr2 60984760 60984811 -192271772 + CT-rich Low_complexity Low_complexity 2 52 0 5014 76 0 19 chr2 60984811 60985497 -192271086 - L1PA8A LINE L1 -40 6091 5419 8317 273 22 22 chr2 60985497 60989285 -192267298 - L1PA15 LINE L1 -2357 4440 44 1128 209 103 53 chr2 60989303 60989604 -192266979 - MLT1E2 LTR MaLR -310 316 1 579 244 0 0 chr2 60990126 60990249 -192266334 - MER58B DNA MER1_type 0 341 219 399 283 136 80 chr2 60990349 60990865 -192265718 + L1M4 LINE L1 3652 4196 -1950 212 200 22 0 chr2 60991188 60991233 -192265350 + (TAGA)n Simple_repeat Simple_repeat 1 46 0 24 53 0 0 chr2 60991244 60991282 -192265301 + AT_rich Low_complexity Low_complexity 1 38 0 1484 230 99 15 chr2 60991642 60992116 -192264467 + L1ME1 LINE L1 3983 4496 -1650 3571 212 75 54 chr2 60992314 60992692 -192263891 + L1ME1 LINE L1 4475 4843 -1323 2340 103 0 0 chr2 60992692 60992994 -192263589 - AluSx SINE Alu -10 302 1 3571 212 75 54 chr2 60992994 60994277 -192262306 + L1ME1 LINE L1 4843 6166 0 2263 180 47 70 chr2 60994476 60995003 -192261580 + MLT2B2 LTR ERVL 1 515 0 408 71 0 0 chr2 60996937 60996993 -192259590 + (CA)n Simple_repeat Simple_repeat 1 56 0 387 222 34 17 chr2 60997358 60997475 -192259108 + L1ME1 LINE L1 6048 6166 0 2195 69 7 42 chr2 60997762 60998068 -192258515 + AluSc SINE Alu 1 295 -14 229 346 79 0 chr2 60998286 60998413 -192258170 + L3 LINE CR1 1424 1560 -17 2717 13 0 0 chr2 60998628 60998931 -192257652 - AluYb8 SINE Alu -15 303 1 721 329 42 0 chr2 60998980 60999217 -192257366 + MIR SINE MIR 6 252 -10 6090 180 60 14 chr2 61000715 61002007 -192254576 - Charlie1a DNA MER1_type 0 1455 104 345 275 0 12 chr2 61002010 61002090 -192254493 - MER2 DNA MER2_type 0 345 267 268 182 0 0 chr2 61002261 61002305 -192254278 - MER2 DNA MER2_type -300 45 2 463 287 0 0 chr2 61002305 61002406 -192254177 - Charlie1a DNA MER1_type -1351 104 4 847 166 7 0 chr2 61002805 61002950 -192253633 + MER2 DNA MER2_type 65 210 -135 1581 171 43 17 chr2 61003678 61003977 -192252606 + AluSx SINE Alu 1 307 -5 241 227 23 68 chr2 61004195 61004283 -192252300 + HAL1 LINE L1 2416 2499 -8 22 35 0 0 chr2 61005061 61005090 -192251493 + AT_rich Low_complexity Low_complexity 1 29 0 23 33 0 0 chr2 61005629 61005659 -192250924 + AT_rich Low_complexity Low_complexity 1 30 0 762 149 0 9 chr2 61005929 61006043 -192250540 + FLAM_C SINE Alu 12 124 -19 294 143 0 0 chr2 61006049 61006098 -192250485 + (CA)n Simple_repeat Simple_repeat 2 50 0 240 35 0 0 chr2 61006626 61006655 -192249928 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 2157 95 0 0 chr2 61007605 61007916 -192248667 + AluSx SINE Alu 9 319 0 263 288 14 0 chr2 61008079 61008152 -192248431 + L2 LINE L2 3240 3313 0 2020 126 24 3 chr2 61008256 61008550 -192248033 + AluSq SINE Alu 1 300 -13 612 159 147 6 chr2 61009554 61009717 -192246866 - MER53 DNA DNA 0 189 4 218 133 0 22 chr2 61010222 61010267 -192246316 + (CA)n Simple_repeat Simple_repeat 1 44 0 416 316 53 0 chr2 61011560 61011712 -192244871 + L1MEd LINE L1 938 1097 -5022 6789 205 42 5 chr2 61011763 61013094 -192243489 + ERVL LTR ERVL 534 1914 -3850 733 268 6 6 chr2 61013094 61013262 -192243321 + MLT2B1 LTR ERVL 288 455 -65 303 28 0 0 chr2 61013262 61013298 -192243285 + (TC)n Simple_repeat Simple_repeat 1 36 0 257 271 0 0 chr2 61013298 61013357 -192243226 + (TA)n Simple_repeat Simple_repeat 1 59 0 2298 164 28 23 chr2 61013400 61013832 -192242751 + Tigger2a DNA MER2_type 1 434 0 288 276 125 0 chr2 61013834 61014066 -192242517 + L1MEd LINE L1 2313 2573 -3556 438 226 47 94 chr2 61014141 61014375 -192242208 + L1MEd LINE L1 2726 2948 -3181 207 167 0 0 chr2 61014411 61014453 -192242130 + GA-rich Low_complexity Low_complexity 3 44 0 183 80 0 0 chr2 61014578 61014603 -192241980 + (GGAA)n Simple_repeat Simple_repeat 2 26 0 381 251 42 66 chr2 61014610 61014777 -192241806 + L1MEd LINE L1 3013 3175 -2954 1127 198 54 95 chr2 61014831 61015209 -192241374 - MLT1A1 LTR MaLR 0 365 1 455 289 43 86 chr2 61015290 61015639 -192240944 - Charlie7 DNA MER1_type -2257 355 22 677 299 17 0 chr2 61016187 61016361 -192240222 + MIR SINE MIR 4 180 -82 23 0 0 0 chr2 61017160 61017183 -192239400 + AT_rich Low_complexity Low_complexity 1 23 0 196 39 0 135 chr2 61017704 61017756 -192238827 + (TTTTA)n Simple_repeat Simple_repeat 2 46 0 379 220 33 11 chr2 61017938 61018029 -192238554 - MER21B LTR ERV1 -125 738 646 617 226 24 31 chr2 61018030 61018189 -192238394 + MER34C LTR ERV1 4 140 -445 2147 38 11 0 chr2 61018193 61018454 -192238129 + MER41A LTR ERV1 291 554 0 787 258 28 95 chr2 61018458 61018858 -192237725 - MER21B LTR ERV1 -490 373 1 21 0 0 0 chr2 61019128 61019149 -192237434 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr2 61019563 61019593 -192236990 + AT_rich Low_complexity Low_complexity 1 30 0 2439 31 41 0 chr2 61019645 61019938 -192236645 + AluY SINE Alu 1 305 -6 331 395 39 0 chr2 61020671 61020800 -192235783 - L2 LINE L2 -5 3267 3134 627 221 37 0 chr2 61020987 61021123 -192235460 + MLT1D LTR MaLR 365 505 0 497 292 89 20 chr2 61021399 61021601 -192234982 + MIR SINE MIR 32 247 -15 23 0 0 0 chr2 61021687 61021710 -192234873 + AT_rich Low_complexity Low_complexity 1 23 0 859 236 88 0 chr2 61022119 61022335 -192234248 + MIR SINE MIR 28 262 0 2050 83 10 47 chr2 61022413 61022713 -192233870 - AluSx SINE Alu -23 289 1 2076 133 0 7 chr2 61024040 61024348 -192232235 - AluSx SINE Alu -6 306 1 299 278 68 68 chr2 61026116 61026276 -192230307 + L1MC4a LINE L1 5706 5868 -1940 1403 206 31 11 chr2 61026276 61026563 -192230020 - AluJo SINE Alu -19 293 1 299 278 68 68 chr2 61026563 61026636 -192229947 + L1MC4a LINE L1 5867 5939 -1869 755 238 34 40 chr2 61026935 61027364 -192229219 - Charlie4a DNA MER1_type -5 503 18 1850 160 3 0 chr2 61028659 61028947 -192227636 + AluJb SINE Alu 8 296 -16 2206 168 30 34 chr2 61029014 61029579 -192227004 - L1MB3 LINE L1 -1 6182 5659 1137 60 0 66 chr2 61030037 61030204 -192226379 - AluY SINE Alu -12 299 144 721 284 21 12 chr2 61031157 61031400 -192225183 + MIR SINE MIR 2 246 -16 1422 180 55 55 chr2 61032766 61033077 -192223506 - AluJb SINE Alu -1 311 1 22 56 0 0 chr2 61033118 61033154 -192223429 + AT_rich Low_complexity Low_complexity 1 36 0 1718 35 0 0 chr2 61034396 61034599 -192221984 - L1PA5 LINE L1 -377 5778 5576 2905 37 0 8 chr2 61034599 61034942 -192221641 + L1PA5 LINE L1 5790 6139 -15 375 83 0 0 chr2 61034942 61035002 -192221581 + (TA)n Simple_repeat Simple_repeat 2 61 0 445 149 0 0 chr2 61036391 61036465 -192220118 - L1P LINE L1 -1074 5072 4999 350 298 21 0 chr2 61036605 61036699 -192219884 - L2 LINE L2 -963 2351 2256 717 251 82 4 chr2 61036853 61037214 -192219369 + MLT1G LTR MaLR 125 567 -23 291 286 0 0 chr2 61037313 61037397 -192219186 - L2 LINE L2 -1227 2087 2004 1430 167 73 35 chr2 61038304 61038592 -192217991 - MLT1A1 LTR MaLR 0 365 67 2642 191 9 11 chr2 61038594 61039060 -192217523 + MER70A LTR ERVL 8 472 0 482 142 13 11 chr2 61039060 61039141 -192217442 - MLT1A2 LTR MaLR -312 78 1 1819 157 194 0 chr2 61039311 61039688 -192216895 + MLT1D LTR MaLR 56 505 0 373 360 126 37 chr2 61040128 61040629 -192215954 + L2 LINE L2 2652 3194 -78 236 279 82 0 chr2 61040864 61040925 -192215658 - L2 LINE L2 0 3313 3248 701 230 13 7 chr2 61042845 61042997 -192213586 + MER3 DNA MER1_type 2 154 -55 1709 190 18 0 chr2 61043008 61043292 -192213291 - AluJb SINE Alu -21 291 3 303 226 91 32 chr2 61043835 61044021 -192212562 + L1M3 LINE L1 5307 5452 -728 215 167 0 24 chr2 61044022 61044064 -192212519 - L2 LINE L2 -4 3268 3228 677 243 73 109 chr2 61044068 61044149 -192212434 + MER34 LTR ERV1 4 86 -456 1835 113 150 12 chr2 61044149 61044475 -192212108 + THE1C LTR MaLR 1 371 -4 677 243 73 109 chr2 61044475 61044915 -192211668 + MER34 LTR ERV1 86 506 -36 355 286 84 56 chr2 61044975 61045188 -192211395 + L1MC4a LINE L1 5711 5929 -1879 296 241 91 67 chr2 61045706 61045959 -192210624 + L1ME4a LINE L1 5849 6107 -14 1260 133 17 64 chr2 61045962 61046196 -192210387 - AluJo SINE Alu 0 312 90 21 36 0 0 chr2 61046205 61046233 -192210350 + AT_rich Low_complexity Low_complexity 1 28 0 4213 151 69 28 chr2 61047362 61048204 -192208379 + MER4D LTR ERV1 1 664 0 22 0 0 0 chr2 61048221 61048243 -192208340 + AT_rich Low_complexity Low_complexity 1 22 0 573 317 28 0 chr2 61049191 61049371 -192207212 - MLT1L LTR MaLR -7 608 424 1787 213 203 9 chr2 61049381 61049949 -192206634 - L1ME1 LINE L1 -4 6162 5485 537 204 68 100 chr2 61049937 61050246 -192206337 - L1ME1 LINE L1 -956 5190 4892 * 240 301 41 65 chr2 61050334 61050457 -192206126 - MLT1L LTR MaLR -345 270 151 759 290 73 40 chr2 61050490 61050887 -192205696 - L2 LINE L2 -52 3261 2852 572 167 120 134 chr2 61050896 61051112 -192205471 + MER20 DNA MER1_type 7 219 0 592 266 143 21 chr2 61051116 61051402 -192205181 - L2 LINE L2 -518 2796 2476 2230 93 0 3 chr2 61051903 61052204 -192204379 - AluSq SINE Alu -13 300 1 195 182 0 0 chr2 61054371 61054404 -192202179 - L2 LINE L2 -6 3307 3275 791 216 11 11 chr2 61055421 61055606 -192200977 + MER105 DNA DNA 6 190 -14 180 0 0 0 chr2 61055944 61055964 -192200619 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 955 167 150 24 chr2 61056141 61056428 -192200155 - MER33 DNA MER1_type 0 324 2 2193 119 0 0 chr2 61056902 61057204 -192199379 - AluSx SINE Alu -10 302 1 181 254 306 57 chr2 61058153 61058346 -192198237 + MIR SINE MIR 19 259 -3 1658 159 45 3 chr2 61058390 61058679 -192197904 + AluSx SINE Alu 1 301 -11 24 32 0 0 chr2 61059642 61059673 -192196910 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr2 61060110 61060139 -192196444 + AT_rich Low_complexity Low_complexity 1 29 0 316 298 0 26 chr2 61064777 61064903 -192191680 - MIR SINE MIR -23 239 85 7928 130 32 3 chr2 61068010 61069239 -192187344 + Tigger1 DNA MER2_type 1 1264 -1154 562 181 14 9 chr2 61069353 61069572 -192187011 + L1MA4A LINE L1 6000 6280 -23 6952 149 19 6 chr2 61069577 61070727 -192185856 + Tigger1 DNA MER2_type 1249 2413 -5 1204 223 98 30 chr2 61071263 61071600 -192184983 - L1MD2 LINE L1 -264 6355 5996 * 3285 250 64 35 chr2 61071594 61072884 -192183699 - L1MD2 LINE L1 -1419 4987 3661 1778 170 49 71 chr2 61072902 61073468 -192183115 + MLT2A2 LTR ERVL 1 554 0 22 0 0 0 chr2 61073495 61073517 -192183066 + AT_rich Low_complexity Low_complexity 1 22 0 303 234 158 6 chr2 61073540 61073698 -192182885 - L1MD2 LINE L1 -2846 3560 3379 1602 254 92 60 chr2 61073736 61073977 -192182606 - L1MD2 LINE L1 -4313 2093 1861 1996 140 0 0 chr2 61073977 61074269 -192182314 - AluSx SINE Alu 0 312 21 1602 254 92 60 chr2 61074269 61075310 -192181273 - L1MD2 LINE L1 -4545 1861 802 910 204 19 24 chr2 61076055 61076266 -192180317 - L1MC2 LINE L1 -26 6598 6389 749 213 0 0 chr2 61076267 61076408 -192180175 - FLAM_A SINE Alu 0 142 2 6297 202 40 16 chr2 61076410 61078947 -192177636 - L1MC2 LINE L1 -223 6401 3803 3144 218 92 10 chr2 61078953 61079663 -192176920 - L1MC2 LINE L1 -3063 3363 2713 2921 95 53 2 chr2 61079663 61079701 -192176882 - MLT2A2 LTR ERVL 0 453 418 267 104 0 0 chr2 61079701 61079749 -192176834 + (TA)n Simple_repeat Simple_repeat 1 48 0 2921 95 53 2 chr2 61079749 61080141 -192176442 - MLT2A2 LTR ERVL -35 418 1 3144 218 92 10 chr2 61080141 61080878 -192175705 - L1MC2 LINE L1 -3713 2713 1796 325 197 28 14 chr2 61080875 61080946 -192175637 - L1MC2 LINE L1 -5362 545 474 * 4585 141 28 1 chr2 61080960 61081700 -192174883 - L1PA15 LINE L1 -3 6162 5403 600 206 42 30 chr2 61081701 61081866 -192174717 - L1MC2 LINE L1 -5417 490 324 * 774 179 59 40 chr2 61081858 61082130 -192174453 - L1MC2 LINE L1 -5971 455 27 1704 187 39 20 chr2 61082258 61082616 -192173967 - MER47A DNA MER2_type 0 366 2 396 260 40 31 chr2 61082620 61082802 -192173781 - L1M4 LINE L1 -2646 3500 3319 903 238 58 55 chr2 61082905 61083233 -192173350 - L1MC4a LINE L1 -1 7807 7479 4190 164 16 32 chr2 61084092 61084907 -192171676 - L1MB2 LINE L1 -47 6124 5323 699 177 8 0 chr2 61084907 61085031 -192171552 - FLAM_C SINE Alu -12 131 7 297 151 104 0 chr2 61085040 61085131 -192171452 - L1MB2 LINE L1 -816 5330 5227 1610 216 244 50 chr2 61085135 61085620 -192170963 - L1MC4 LINE L1 -472 7570 7180 183 80 0 0 chr2 61085620 61085645 -192170938 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 1610 216 244 50 chr2 61085645 61085694 -192170889 - L1MC4 LINE L1 -862 7180 7142 340 157 143 0 chr2 61085694 61085764 -192170819 + MADE1 DNA Mariner 1 80 0 1610 216 244 50 chr2 61085764 61085942 -192170641 - L1MC4 LINE L1 -900 7142 6719 426 285 88 7 chr2 61086076 61086213 -192170370 - L2 LINE L2 -1 3312 3165 235 198 58 12 chr2 61086214 61086300 -192170283 - L1M4 LINE L1 -3161 2985 2896 752 293 117 40 chr2 61086303 61086920 -192169663 - L1M4 LINE L1 -3352 2794 2131 1045 254 108 35 chr2 61087124 61087466 -192169117 - HsTC2 DNA Tc2 -1522 376 10 26 50 0 0 chr2 61087475 61087515 -192169068 + AT_rich Low_complexity Low_complexity 1 40 0 228 139 0 0 chr2 61087852 61087888 -192168695 + HsTC2 DNA Tc2 1850 1885 -13 378 0 0 0 chr2 61087922 61087964 -192168619 + (TG)n Simple_repeat Simple_repeat 2 43 0 24 0 0 0 chr2 61088979 61089003 -192167580 + AT_rich Low_complexity Low_complexity 1 24 0 29 28 0 0 chr2 61089101 61089137 -192167446 + AT_rich Low_complexity Low_complexity 1 36 0 246 208 0 104 chr2 61089237 61089314 -192167269 + L2 LINE L2 3244 3312 -1 502 333 63 17 chr2 61089873 61090110 -192166473 + MIR SINE MIR 3 250 -12 233 277 85 64 chr2 61090472 61090566 -192166017 + L2 LINE L2 3198 3293 -20 213 39 0 0 chr2 61091985 61092011 -192164572 + (T)n Simple_repeat Simple_repeat 1 26 0 25 65 0 0 chr2 61092189 61092235 -192164348 + AT_rich Low_complexity Low_complexity 1 46 0 1207 271 43 72 chr2 61092546 61093126 -192163457 - MLT1F1 LTR MaLR -2 565 3 218 330 155 0 chr2 61093205 61093308 -192163275 - MIR SINE MIR -32 230 112 322 320 60 34 chr2 61093379 61093593 -192162990 + L1ME4a LINE L1 5740 5963 -158 2353 83 0 0 chr2 61093771 61094060 -192162523 + AluSc SINE Alu 1 289 -20 311 238 12 0 chr2 61095963 61096043 -192160540 - MIR SINE MIR -129 133 53 2441 71 0 13 chr2 61096178 61096486 -192160097 + AluSq SINE Alu 1 304 -9 447 196 64 132 chr2 61096502 61096600 -192159983 + MER3 DNA MER1_type 9 87 -122 4210 158 19 56 chr2 61096600 61097480 -192159103 + L1MC1 LINE L1 5486 6333 0 447 196 64 132 chr2 61097480 61097585 -192158998 + MER3 DNA MER1_type 87 198 -11 233 271 82 73 chr2 61097765 61098068 -192158515 + L1MC/D LINE L1 5283 5588 -2220 2937 187 50 19 chr2 61098089 61098724 -192157859 - L1ME1 LINE L1 -5 6161 5507 9995 32 7 0 chr2 61098733 61100715 -192155868 - L1PA5 LINE L1 -5 6149 4160 821 286 101 64 chr2 61100743 61101079 -192155504 - L1ME1 LINE L1 -1196 4950 4628 2491 54 3 0 chr2 61101079 61101377 -192155206 + AluY SINE Alu 2 300 -11 821 286 101 64 chr2 61101377 61102848 -192153735 - L1ME1 LINE L1 -1518 4628 3077 635 325 92 32 chr2 61102869 61103423 -192153160 - L1ME1 LINE L1 -3123 3023 2437 36 23 0 0 chr2 61103594 61103637 -192152946 + AT_rich Low_complexity Low_complexity 1 43 0 7075 135 37 7 chr2 61103637 61104831 -192151752 + Tigger3b DNA MER2_type 1 1230 -1 706 254 67 0 chr2 61105821 61105986 -192150597 + MIR3 SINE MIR 30 205 -3 22 88 0 0 chr2 61106667 61106724 -192149859 + AT_rich Low_complexity Low_complexity 1 57 0 285 229 35 62 chr2 61107405 61107549 -192149034 - L1MC5 LINE L1 -184 7777 7638 188 360 0 0 chr2 61107669 61107758 -192148825 + MIR3 SINE MIR 108 196 -12 248 354 61 0 chr2 61107889 61107971 -192148612 + L2 LINE L2 3168 3254 -18 13615 194 35 15 chr2 61108282 61111612 -192144971 + L1P5 LINE L1 2820 6210 -662 195 42 0 0 chr2 61114566 61114590 -192141993 + (TTTC)n Simple_repeat Simple_repeat 2 25 0 409 310 120 20 chr2 61114897 61115097 -192141486 + MIR SINE MIR 32 251 -11 2235 129 13 29 chr2 61115471 61115852 -192140731 - THE1C LTR MaLR 0 375 1 685 296 68 49 chr2 61116668 61117033 -192139550 - LTR16B LTR ERVL -12 452 81 802 158 8 15 chr2 61117537 61117670 -192138913 + AluJo SINE Alu 3 134 -178 657 184 63 63 chr2 61117913 61118087 -192138496 - MER58C DNA MER1_type -4 211 38 512 309 39 21 chr2 61118190 61118423 -192138160 + MIR SINE MIR 20 256 -6 3042 163 73 33 chr2 61118564 61119093 -192137490 - LTR48 LTR ERV1 0 787 228 2240 89 0 13 chr2 61119093 61119395 -192137188 + AluSg SINE Alu 1 298 -12 3042 163 73 33 chr2 61119395 61119496 -192137087 - LTR48 LTR ERV1 -559 228 132 2395 94 77 28 chr2 61119498 61119925 -192136658 - LTR7 LTR ERV1 -2 448 1 2393 85 53 13 chr2 61119925 61120302 -192136281 - HERVH LTR ERV1 0 7713 7322 1395 122 18 9 chr2 61120300 61120521 -192136062 - HERVH LTR ERV1 -1894 5819 5597 * 4226 151 3 1 chr2 61120518 61121179 -192135404 - HERVH LTR ERV1 -2564 5149 4488 3250 118 6 4 chr2 61121181 61121682 -192134901 - HERVH LTR ERV1 -3720 3993 3492 867 149 20 0 chr2 61121672 61121820 -192134763 - HERVH LTR ERV1 -4423 3290 3140 * 19945 96 21 8 chr2 61121814 61124762 -192131821 - HERVH LTR ERV1 -4726 2987 1 2556 97 60 21 chr2 61124764 61125195 -192131388 - LTR7 LTR ERV1 -2 448 1 692 163 35 57 chr2 61125195 61125280 -192131303 - MER39 LTR ERV1 -569 138 56 1898 75 115 39 chr2 61125280 61125559 -192131024 + AluSx SINE Alu 1 300 -12 692 163 35 57 chr2 61125559 61125614 -192130969 - MER39 LTR ERV1 -651 56 1 27 0 0 0 chr2 61125739 61125766 -192130817 + AT_rich Low_complexity Low_complexity 1 27 0 40 21 0 0 chr2 61125823 61125870 -192130713 + AT_rich Low_complexity Low_complexity 1 47 0 2273 119 3 3 chr2 61126244 61126555 -192130028 - AluSx SINE Alu -1 311 1 1686 184 130 16 chr2 61126645 61127068 -192129515 + MER67D LTR ERV1 1 471 -43 355 314 245 10 chr2 61127102 61127306 -192129277 + MIR SINE MIR 11 262 0 2496 117 42 33 chr2 61128313 61128742 -192127841 - Tigger2a DNA MER2_type 0 434 2 1880 122 49 14 chr2 61129644 61129932 -192126651 + AluJb SINE Alu 1 298 -14 261 253 23 11 chr2 61131757 61131844 -192124739 + L1MC4 LINE L1 6616 6703 -1339 216 97 0 0 chr2 61132606 61132637 -192123946 + (TGGA)n Simple_repeat Simple_repeat 3 33 0 2177 120 0 0 chr2 61134403 61134695 -192121888 - AluSx SINE Alu -19 293 2 456 300 89 20 chr2 61134697 61134927 -192121656 + MIR SINE MIR 5 249 -13 22 0 0 0 chr2 61135576 61135598 -192120985 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 61137027 61137048 -192119535 + AT_rich Low_complexity Low_complexity 1 21 0 733 123 0 0 chr2 61139734 61139840 -192116743 - MER46A DNA MER2_type -1 235 130 3174 147 132 8 chr2 61140049 61140394 -192116189 + MER39 LTR ERV1 1 302 -405 2876 6 0 0 chr2 61140394 61140705 -192115878 + AluYb8 SINE Alu 1 311 -7 3174 147 132 8 chr2 61140705 61140987 -192115596 + MER39 LTR ERV1 302 706 -1 2167 105 0 7 chr2 61142453 61142749 -192113834 - AluSg SINE Alu -16 294 1 418 79 11 45 chr2 61142825 61142914 -192113669 + (TA)n Simple_repeat Simple_repeat 2 87 0 306 220 30 30 chr2 61142915 61143015 -192113568 - L1MC4 LINE L1 -1339 6703 6604 670 82 28 50 chr2 61143015 61143197 -192113386 + (TA)n Simple_repeat Simple_repeat 2 179 0 629 60 0 90 chr2 61143221 61143524 -192113059 + (TA)n Simple_repeat Simple_repeat 1 275 0 21 0 0 0 chr2 61144434 61144455 -192112128 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr2 61147857 61147887 -192108696 + AT_rich Low_complexity Low_complexity 1 30 0 987 155 83 0 chr2 61149933 61150114 -192106469 + L1MA9 LINE L1 5600 5795 -496 229 172 52 0 chr2 61150173 61150231 -192106352 + L1MCa LINE L1 2004 2064 -4362 282 160 0 0 chr2 61150234 61150284 -192106299 + (CATA)n Simple_repeat Simple_repeat 4 53 0 2861 117 59 8 chr2 61150284 61150778 -192105805 + L1MA9 LINE L1 5789 6307 -5 2396 82 0 0 chr2 61151578 61151869 -192104714 - AluSc SINE Alu -18 291 1 1815 32 0 0 chr2 61152404 61152620 -192103963 - L1PA5 LINE L1 -255 5899 5684 5490 227 69 86 chr2 61154252 61156645 -192099938 - L1ME2 LINE L1 -112 6121 3790 459 46 62 0 chr2 61156645 61156710 -192099873 - MER41A LTR ERV1 -85 469 401 5490 227 69 86 chr2 61156710 61158340 -192098243 - L1ME2 LINE L1 -2443 3790 2133 306 0 0 0 chr2 61158362 61158396 -192098187 + (T)n Simple_repeat Simple_repeat 1 34 0 309 26 0 0 chr2 61159085 61159123 -192097460 + (T)n Simple_repeat Simple_repeat 1 38 0 1022 233 27 9 chr2 61159141 61159360 -192097223 + MER58A DNA MER1_type 2 224 0 1013 185 108 0 chr2 61159372 61159631 -192096952 - MER33 DNA MER1_type -5 319 33 1034 269 75 12 chr2 61159639 61160055 -192096528 - L1ME2 LINE L1 -4328 2068 1627 1590 227 127 43 chr2 61160101 61160677 -192095906 - L1MD2 LINE L1 -18 6735 6112 * 2769 211 80 99 chr2 61160675 61161251 -192095332 - L1MD2 LINE L1 -2099 4441 3856 506 185 12 12 chr2 61161251 61161360 -192095223 - MER58B DNA MER1_type 0 341 107 2769 211 80 99 chr2 61161360 61161677 -192094906 - L1MD2 LINE L1 -2684 3856 3465 570 148 7 87 chr2 61161677 61161826 -192094757 - L1MA8 LINE L1 0 6291 6155 2769 211 80 99 chr2 61161826 61162055 -192094528 - L1MD2 LINE L1 -3075 3465 3233 1256 265 122 10 chr2 61162055 61162572 -192094011 - L1M4 LINE L1 -3014 3132 2558 225 279 0 0 chr2 61163066 61163134 -192093449 + C-rich Low_complexity Low_complexity 1 68 0 351 311 33 52 chr2 61163148 61163360 -192093223 - L1MD2 LINE L1 -6122 418 211 353 250 178 22 chr2 61163503 61163683 -192092900 - L1ME2 LINE L1 -4760 1636 1429 642 288 118 34 chr2 61163701 61163933 -192092650 - L1ME2 LINE L1 -5011 1385 1174 320 0 25 0 chr2 61163933 61163973 -192092610 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 642 288 118 34 chr2 61163973 61164366 -192092217 - L1ME2 LINE L1 -5222 1174 707 278 286 22 44 chr2 61164573 61164664 -192091919 + MER5B DNA MER1_type 89 177 -1 963 214 23 9 chr2 61164671 61164886 -192091697 - MER20 DNA MER1_type -1 218 1 428 237 10 10 chr2 61164929 61165026 -192091557 + MER5A DNA MER1_type 9 105 -84 953 195 16 0 chr2 61165091 61165276 -192091307 - MER58A DNA MER1_type 0 224 37 788 143 68 7 chr2 61169045 61169192 -192087391 - L1MA4 LINE L1 -25 6275 6120 1066 209 16 79 chr2 61169799 61170053 -192086530 - MER8 DNA MER2_type -1 238 1 25 0 0 0 chr2 61170436 61170461 -192086122 + AT_rich Low_complexity Low_complexity 1 25 0 520 113 0 0 chr2 61170613 61170693 -192085890 + AluSp/q SINE Alu 220 299 -14 21 0 0 0 chr2 61171336 61171357 -192085226 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr2 61173453 61173485 -192083098 + AT_rich Low_complexity Low_complexity 1 32 0 2195 102 0 0 chr2 61174287 61174580 -192082003 + AluSc SINE Alu 1 293 -16 27 0 0 0 chr2 61175466 61175493 -192081090 + AT_rich Low_complexity Low_complexity 1 27 0 14659 139 34 103 chr2 61175514 61178969 -192077614 + L1PA7 LINE L1 12 3227 -2919 42866 42 4 7 chr2 61178970 61185144 -192071439 + L1PA3 LINE L1 2 6154 -1 213 94 0 0 chr2 61185148 61185180 -192071403 + (A)n Simple_repeat Simple_repeat 1 32 0 14811 94 27 0 chr2 61185185 61188062 -192068521 + L1PA7 LINE L1 3230 6141 -13 183 42 0 0 chr2 61188065 61188089 -192068494 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 2033 252 95 13 chr2 61188244 61188874 -192067709 + L1ME2 LINE L1 5468 6149 -15 21 36 0 0 chr2 61189149 61189177 -192067406 + AT_rich Low_complexity Low_complexity 1 28 0 27 62 0 0 chr2 61189280 61189328 -192067255 + AT_rich Low_complexity Low_complexity 1 48 0 544 205 90 19 chr2 61189403 61189559 -192067024 + Charlie4 DNA MER1_type 20 186 -1775 514 311 33 26 chr2 61189561 61189712 -192066871 - MER5B DNA MER1_type -25 153 2 314 278 173 31 chr2 61190194 61190385 -192066198 + MIR SINE MIR 2 219 -43 23 0 0 0 chr2 61190527 61190550 -192066033 + AT_rich Low_complexity Low_complexity 1 23 0 206 341 16 62 chr2 61191232 61191361 -192065222 + MIR3 SINE MIR 58 180 -28 434 308 120 17 chr2 61193731 61194030 -192062553 - LTR16C LTR ERVL -6 485 156 5743 59 3 1 chr2 61194203 61194934 -192061649 + L1PA6 LINE L1 5423 6154 0 2436 187 71 62 chr2 61195155 61195788 -192060795 - L1M4 LINE L1 -847 5299 4658 1877 147 10 10 chr2 61195788 61196095 -192060488 - AluJb SINE Alu -5 307 1 2436 187 71 62 chr2 61196095 61196198 -192060385 - L1M4 LINE L1 -1488 4658 4557 1228 214 81 48 chr2 61196199 61196633 -192059950 + L1ME1 LINE L1 5714 6161 -5 186 143 0 0 chr2 61196839 61196874 -192059709 + (TA)n Simple_repeat Simple_repeat 2 36 0 231 292 0 0 chr2 61197818 61197890 -192058693 + A-rich Low_complexity Low_complexity 1 72 0 320 240 115 21 chr2 61199290 61199386 -192057197 - MIR SINE MIR -156 106 2 656 236 86 86 chr2 61199760 61200188 -192056395 + HAL1 LINE L1 1987 2414 -93 398 256 136 11 chr2 61200295 61200471 -192056112 + L1ME4a LINE L1 4316 4513 -1633 204 390 9 19 chr2 61201220 61201325 -192055258 - MIR SINE MIR -82 126 23 491 264 101 37 chr2 61203151 61203499 -192053084 + L1ME4a LINE L1 5527 5896 -225 184 297 178 10 chr2 61203904 61204005 -192052578 - L2 LINE L2 -10 3303 3186 22 0 0 0 chr2 61204324 61204346 -192052237 + AT_rich Low_complexity Low_complexity 1 22 0 375 163 0 0 chr2 61205384 61205464 -192051119 + (TG)n Simple_repeat Simple_repeat 2 81 0 951 212 55 5 chr2 61205612 61205897 -192050686 - MER2 DNA MER2_type 0 345 1 2393 66 3 3 chr2 61206103 61206407 -192050176 + AluY SINE Alu 1 304 -7 27 49 0 0 chr2 61206792 61206833 -192049750 + AT_rich Low_complexity Low_complexity 1 41 0 366 305 58 32 chr2 61207629 61207783 -192048800 + MIR3 SINE MIR 44 201 -7 24 67 0 0 chr2 61208188 61208233 -192048350 + AT_rich Low_complexity Low_complexity 1 45 0 198 0 0 0 chr2 61209595 61209617 -192046966 + (A)n Simple_repeat Simple_repeat 1 22 0 26 50 0 0 chr2 61210413 61210453 -192046130 + AT_rich Low_complexity Low_complexity 1 40 0 319 247 147 20 chr2 61213641 61213791 -192042792 + HAL1 LINE L1 2283 2451 -56 403 268 77 53 chr2 61214364 61214573 -192042010 + MLT1J LTR MaLR 56 269 -242 546 234 127 0 chr2 61214632 61214790 -192041793 + MER3 DNA MER1_type 10 187 -22 466 206 68 62 chr2 61214798 61214944 -192041639 + MLT1J LTR MaLR 314 460 -51 1534 204 7 7 chr2 61215133 61215412 -192041171 + AluJo SINE Alu 2 280 -32 21 89 0 0 chr2 61215738 61215794 -192040789 + AT_rich Low_complexity Low_complexity 1 56 0 270 356 73 26 chr2 61216038 61216229 -192040354 + L2 LINE L2 2560 2759 -555 299 252 69 0 chr2 61217046 61217142 -192039441 - MIR SINE MIR -62 146 47 1386 161 125 42 chr2 61217516 61217852 -192038731 - THE1B LTR MaLR 0 364 1 11289 94 13 4 chr2 61217852 61219418 -192037165 - THE1B-int LTR MaLR 0 1580 1 2084 114 16 70 chr2 61219418 61219803 -192036780 - THE1B LTR MaLR 0 364 1 716 201 0 8 chr2 61220946 61221080 -192035503 + FLAM_C SINE Alu 1 133 0 230 300 60 10 chr2 61221405 61221505 -192035078 + MIR SINE MIR 144 248 -14 200 125 31 0 chr2 61221829 61221861 -192034722 + L2 LINE L2 3180 3212 -101 1424 129 114 16 chr2 61221886 61222019 -192034564 - AluJb SINE Alu -32 280 161 186 71 0 0 chr2 61222019 61222047 -192034536 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1424 129 114 16 chr2 61222047 61222168 -192034415 - AluJb SINE Alu -151 161 1 29 0 0 0 chr2 61224311 61224340 -192032243 + AT_rich Low_complexity Low_complexity 1 29 0 304 272 0 33 chr2 61224480 61224572 -192032011 + L1MC4 LINE L1 6614 6702 -1340 252 0 0 0 chr2 61224572 61224600 -192031983 + (CA)n Simple_repeat Simple_repeat 1 28 0 841 190 18 0 chr2 61224610 61224773 -192031810 - MLT1D LTR MaLR -46 459 294 1802 250 92 26 chr2 61224913 61225828 -192030755 + L1M4 LINE L1 2348 3322 -2824 5254 180 47 23 chr2 61225851 61226527 -192030056 + L1MC3 LINE L1 6181 6895 -890 306 0 0 0 chr2 61226527 61226561 -192030022 + (TA)n Simple_repeat Simple_repeat 2 35 0 5254 180 47 23 chr2 61226561 61227003 -192029580 + L1MC3 LINE L1 6895 7325 -460 2137 34 93 4 chr2 61228287 61228555 -192028028 + AluY SINE Alu 2 293 -18 25 0 0 0 chr2 61229670 61229695 -192026888 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr2 61230200 61230225 -192026358 + AT_rich Low_complexity Low_complexity 1 25 0 22 94 0 0 chr2 61230309 61230373 -192026210 + AT_rich Low_complexity Low_complexity 1 64 0 203 250 62 0 chr2 61231047 61231111 -192025472 + MIR SINE MIR 117 184 -78 27 29 0 0 chr2 61231624 61231658 -192024925 + AT_rich Low_complexity Low_complexity 1 34 0 1333 221 93 69 chr2 61232197 61232881 -192023702 + L1MC5 LINE L1 6558 7256 -728 546 207 47 120 chr2 61233007 61233307 -192023276 + L1MC5 LINE L1 7299 7576 -385 21 0 0 0 chr2 61233339 61233360 -192023223 + AT_rich Low_complexity Low_complexity 1 21 0 275 251 118 64 chr2 61233363 61233566 -192023017 + L1MC5 LINE L1 7694 7907 -54 3959 121 71 77 chr2 61234429 61235204 -192021379 - LTR1 LTR ERV1 -15 770 1 249 224 0 0 chr2 61235249 61235307 -192021276 + GA-rich Low_complexity Low_complexity 2 59 0 1010 221 42 5 chr2 61235810 61236023 -192020560 + MER58A DNA MER1_type 4 224 0 955 141 41 24 chr2 61237654 61237824 -192018759 - FRAM SINE Alu -5 171 1 380 362 143 2 chr2 61238366 61238896 -192017687 + L2 LINE L2 1943 2547 -767 21 0 0 0 chr2 61239178 61239199 -192017384 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 61239913 61239942 -192016641 + AT_rich Low_complexity Low_complexity 1 29 0 360 306 113 77 chr2 61241695 61242199 -192014384 + HAL1 LINE L1 1047 1568 -939 3102 264 72 48 chr2 61242199 61243702 -192012881 + L1MEc LINE L1 41 1579 -4817 2931 248 87 18 chr2 61243752 61245068 -192011515 + L1MEc LINE L1 2007 3365 -2850 1589 229 64 8 chr2 61245081 61245474 -192011109 + MLT1F1 LTR MaLR 9 423 -144 1291 62 84 0 chr2 61245446 61245624 -192010959 - MER30 DNA MER1_type -34 196 4 * 734 224 42 0 chr2 61245640 61245805 -192010778 + MLT1F LTR MaLR 371 542 0 665 239 4 2 chr2 61245810 61245987 -192010596 + L1MEc LINE L1 3375 3554 -2661 3243 205 126 38 chr2 61246278 61247264 -192009319 + L1MC4 LINE L1 6966 8038 -4 21 57 0 0 chr2 61247465 61247500 -192009083 + AT_rich Low_complexity Low_complexity 1 35 0 317 285 122 76 chr2 61247788 61247960 -192008623 + MIR SINE MIR 33 212 -50 393 162 40 14 chr2 61249688 61249762 -192006821 + MER5A DNA MER1_type 1 76 -113 985 263 94 38 chr2 61249767 61250234 -192006349 + MER39 LTR ERV1 1 707 0 582 230 0 0 chr2 61250234 61250347 -192006236 + MER5A DNA MER1_type 77 189 0 194 286 43 29 chr2 61250650 61250720 -192005863 + L2 LINE L2 3235 3305 -8 683 214 54 24 chr2 61250727 61250895 -192005688 - MLT1A1 LTR MaLR -12 353 181 29 78 0 0 chr2 61251719 61251783 -192004800 + AT_rich Low_complexity Low_complexity 1 64 0 252 306 50 25 chr2 61252126 61252247 -192004336 - L2 LINE L2 -1315 1999 1876 382 240 182 16 chr2 61253372 61253493 -192003090 + MER5A DNA MER1_type 5 145 -44 2248 117 0 0 chr2 61253514 61253823 -192002760 + AluSx SINE Alu 1 309 -3 233 162 191 15 chr2 61255817 61255885 -192000698 - L1ME1 LINE L1 -8 6158 6079 658 284 61 11 chr2 61255889 61256150 -192000433 - L1ME1 LINE L1 -2209 5599 5326 1887 162 0 7 chr2 61256219 61256527 -192000056 - AluJb SINE Alu -6 306 1 546 245 202 16 chr2 61258374 61258562 -191998021 + MLT1J2 LTR MaLR 5 227 -223 301 211 32 24 chr2 61258628 61258732 -191997851 + MLT1J1 LTR MaLR 343 446 -4 307 307 129 46 chr2 61258814 61259117 -191997466 + L1M2 LINE L1 1043 1370 -5479 21 0 0 0 chr2 61260022 61260043 -191996540 + AT_rich Low_complexity Low_complexity 1 21 0 410 180 137 50 chr2 61260073 61260234 -191996349 + Charlie2 DNA MER1_type 2688 2862 0 1738 190 6 3 chr2 61260605 61260916 -191995667 + AluJo SINE Alu 1 312 0 1912 141 3 3 chr2 61261444 61261742 -191994841 - AluJo SINE Alu -14 298 1 992 272 32 57 chr2 61261948 61262346 -191994237 + LTR16A LTR ERVL 14 401 -49 1836 181 3 3 chr2 61262346 61262656 -191993927 - AluJo SINE Alu -2 310 1 992 272 32 57 chr2 61262656 61262698 -191993885 + LTR16A LTR ERVL 401 443 -7 21 36 0 0 chr2 61262708 61262736 -191993847 + AT_rich Low_complexity Low_complexity 1 28 0 181 267 54 33 chr2 61262815 61262927 -191993656 - MIR SINE MIR -55 207 97 872 286 68 4 chr2 61263233 61263467 -191993116 - MIR SINE MIR -10 252 4 4156 163 25 12 chr2 61263608 61264424 -191992159 - L1MB8 LINE L1 0 6178 5353 2195 222 45 52 chr2 61264421 61264633 -191991950 - L1M4b LINE L1 -6287 572 360 * 2313 79 0 35 chr2 61264633 61264951 -191991632 + AluY SINE Alu 1 307 -4 2195 222 45 52 chr2 61264951 61265311 -191991272 - L1M4b LINE L1 -6499 360 4 645 269 94 26 chr2 61265335 61265569 -191991014 + MIR SINE MIR 13 262 0 2142 110 73 20 chr2 61265853 61266209 -191990374 + THE1C LTR MaLR 1 375 0 1205 171 14 5 chr2 61266493 61266710 -191989873 + MER20 DNA MER1_type 1 219 0 707 244 47 9 chr2 61266809 61267134 -191989449 - MLT1I LTR MaLR 0 409 4 25 0 0 0 chr2 61267218 61267243 -191989340 + AT_rich Low_complexity Low_complexity 1 25 0 412 268 8 77 chr2 61267560 61267806 -191988777 + L1MC5 LINE L1 7297 7525 -436 422 132 0 0 chr2 61267829 61267897 -191988686 - MSTD LTR MaLR -3 393 326 2048 119 24 0 chr2 61267899 61268194 -191988389 + AluSq SINE Alu 1 302 -11 596 315 28 0 chr2 61268194 61268372 -191988211 - MSTD LTR MaLR -213 183 1 987 225 9 9 chr2 61268581 61268799 -191987784 + MER20 DNA MER1_type 1 218 -1 192 284 123 12 chr2 61268812 61268893 -191987690 + L2 LINE L2 3195 3284 -29 186 316 40 0 chr2 61268986 61269062 -191987521 - L2 LINE L2 -1040 2274 2196 2286 144 41 3 chr2 61269064 61269452 -191987131 - MER57A LTR ERV1 0 403 1 348 306 28 9 chr2 61269474 61269582 -191987001 - MER5B DNA MER1_type 0 178 69 258 32 0 0 chr2 61269792 61269823 -191986760 + (T)n Simple_repeat Simple_repeat 1 31 0 14709 31 2 0 chr2 61269924 61272467 -191984116 + L1PA3 LINE L1 3625 6169 0 1041 330 35 26 chr2 61272685 61273486 -191983097 + ERVL LTR ERVL 1479 2329 -3435 385 328 72 35 chr2 61273549 61273924 -191982659 + ERVL LTR ERVL 2394 2782 -2703 402 309 93 22 chr2 61274046 61274324 -191982259 + ERVL LTR ERVL 2979 3276 -2378 1039 181 87 40 chr2 61274329 61274641 -191981942 + THE1B LTR MaLR 3 337 -38 1758 190 0 3 chr2 61274641 61274936 -191981647 - AluJb SINE Alu -18 294 1 1039 181 87 40 chr2 61274936 61274976 -191981607 + THE1B LTR MaLR 337 374 -1 375 322 81 41 chr2 61275154 61275583 -191981000 + ERVL LTR ERVL 3580 4081 -1444 194 264 47 66 chr2 61277655 61277761 -191978822 + L3 LINE CR1 1465 1568 -9 181 239 0 22 chr2 61277954 61278000 -191978583 + L2 LINE L2 1980 2024 -1290 28 0 0 0 chr2 61278000 61278028 -191978555 + AT_rich Low_complexity Low_complexity 1 28 0 282 391 53 0 chr2 61278473 61278624 -191977959 - L2 LINE L2 -661 2653 2495 1169 277 59 39 chr2 61279103 61279774 -191976809 + L2 LINE L2 2621 3309 -4 385 341 54 63 chr2 61280681 61280744 -191975839 - L2 LINE L2 0 3272 3210 1678 186 32 19 chr2 61280744 61281114 -191975469 + THE1C LTR MaLR 1 375 0 385 341 54 63 chr2 61281114 61281399 -191975184 - L2 LINE L2 -62 3210 2927 948 341 120 11 chr2 61281782 61282334 -191974249 - L2 LINE L2 -661 2653 2042 6329 63 0 3 chr2 61282731 61283513 -191973070 + LTR17 LTR ERV1 1 780 0 351 272 19 19 chr2 61283742 61283845 -191972738 - MER5A DNA MER1_type -83 106 4 1050 143 0 0 chr2 61285350 61285504 -191971079 + AluSg/x SINE Alu 137 290 -22 240 35 0 0 chr2 61285513 61285542 -191971041 + (GGGGA)n Simple_repeat Simple_repeat 5 33 0 240 35 0 0 chr2 61286074 61286103 -191970480 + (TTTTA)n Simple_repeat Simple_repeat 3 31 0 1901 141 14 14 chr2 61286108 61286398 -191970185 - AluSx SINE Alu -22 290 1 229 348 26 43 chr2 61286588 61286703 -191969880 + L3b LINE CR1 1390 1502 -81 348 330 0 0 chr2 61287284 61287381 -191969202 + L2 LINE L2 3176 3272 0 644 295 123 4 chr2 61287491 61287718 -191968865 - MIR SINE MIR -3 259 6 538 103 10 10 chr2 61287893 61287990 -191968593 + (GGAA)n Simple_repeat Simple_repeat 2 98 0 896 114 0 0 chr2 61288159 61288291 -191968292 + L1MA5A LINE L1 6156 6287 -10 28 61 0 0 chr2 61288409 61288458 -191968125 + AT_rich Low_complexity Low_complexity 1 49 0 1283 192 124 15 chr2 61289451 61289717 -191966866 + AluJb SINE Alu 5 299 -13 261 350 131 6 chr2 61289805 61289965 -191966618 + L2 LINE L2 2955 3134 -138 314 204 10 61 chr2 61290063 61290161 -191966422 + MER46C DNA MER2_type 161 253 -85 1108 158 21 0 chr2 61290172 61290362 -191966221 + MER2 DNA MER2_type 8 201 -144 303 197 91 0 chr2 61290407 61290473 -191966110 + MER2 DNA MER2_type 271 342 -3 1731 233 25 20 chr2 61290782 61290953 -191965630 - MER39 LTR ERV1 0 707 538 2578 116 0 11 chr2 61290953 61291331 -191965252 + THE1C LTR MaLR 2 375 0 1731 233 25 20 chr2 61291331 61291637 -191964946 - MER39 LTR ERV1 -169 538 67 573 332 56 46 chr2 61292020 61292502 -191964081 + L2 LINE L2 1890 2376 -938 278 318 65 65 chr2 61292517 61292893 -191963690 + L2 LINE L2 2667 3044 -228 2256 123 0 0 chr2 61292982 61293292 -191963291 - AluSx SINE Alu 0 312 3 2699 192 8 2 chr2 61293497 61293966 -191962617 - MER70A LTR ERVL 0 472 1 274 262 134 67 chr2 61294005 61294169 -191962414 - L1ME LINE L1 -531 5590 5416 425 304 39 42 chr2 61294222 61294580 -191962003 - HAL1 LINE L1 -1407 1100 744 27 0 0 0 chr2 61295439 61295466 -191961117 + AT_rich Low_complexity Low_complexity 1 27 0 1711 148 32 26 chr2 61295587 61295897 -191960686 + AluJb SINE Alu 1 312 0 361 320 40 22 chr2 61296026 61296254 -191960329 - L1ME LINE L1 -1164 4982 4751 2269 190 29 2 chr2 61296284 61296699 -191959884 - MSTB LTR MaLR 0 426 1 774 108 7 22 chr2 61296709 61296848 -191959735 + (TTTC)n Simple_repeat Simple_repeat 1 137 0 21 0 0 0 chr2 61298204 61298225 -191958358 + AT_rich Low_complexity Low_complexity 1 21 0 326 306 132 0 chr2 61298259 61298380 -191958203 + MIR3 SINE MIR 8 144 -64 289 290 68 49 chr2 61300565 61300727 -191955856 - MIR3 SINE MIR -32 176 6 1079 192 54 21 chr2 61303113 61303353 -191953230 - L1PA16 LINE L1 -14 6152 5905 201 74 0 0 chr2 61303722 61303749 -191952834 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 308 321 0 12 chr2 61306676 61306760 -191949823 - L2 LINE L2 -21 3251 3169 1509 335 63 23 chr2 61306863 61307607 -191948976 + L3 LINE CR1 803 1576 -1 24 32 0 0 chr2 61308185 61308216 -191948367 + AT_rich Low_complexity Low_complexity 1 31 0 4566 202 51 18 chr2 61308325 61310154 -191946429 - L1MB8 LINE L1 -9 6169 4168 466 235 229 12 chr2 61310289 61310455 -191946128 - MIR SINE MIR 0 262 61 230 336 95 9 chr2 61310536 61310679 -191945904 - MIR SINE MIR -63 145 38 2533 119 3 3 chr2 61311415 61311775 -191944808 + THE1B LTR MaLR 2 361 -3 10447 102 40 17 chr2 61311778 61313323 -191943260 + THE1B-int LTR MaLR 1 1580 0 2254 146 3 3 chr2 61313323 61313680 -191942903 + THE1B LTR MaLR 1 357 -7 241 242 22 0 chr2 61313682 61313773 -191942810 + (CATA)n Simple_repeat Simple_repeat 2 94 0 21 0 0 0 chr2 61313928 61313949 -191942634 + AT_rich Low_complexity Low_complexity 1 21 0 186 321 18 0 chr2 61316488 61316544 -191940039 + MIR3 SINE MIR 130 186 -22 252 0 0 0 chr2 61317017 61317045 -191939538 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 2320 188 127 9 chr2 61317240 61317872 -191938711 - LTR48 LTR ERV1 -37 750 45 706 160 17 8 chr2 61317876 61317995 -191938588 + FLAM_C SINE Alu 5 124 -19 235 179 0 54 chr2 61317996 61318052 -191938531 - LTR48 LTR ERV1 -733 54 2 1820 142 28 12 chr2 61318075 61318398 -191938185 + MER57A LTR ERV1 28 355 -48 1050 232 112 54 chr2 61318802 61319319 -191937264 + L1ME2 LINE L1 5608 6154 -10 4959 141 21 20 chr2 61319402 61319538 -191937045 - MER4D LTR ERV1 -5 898 764 2896 13 0 0 chr2 61319538 61319853 -191936730 + AluYb8 SINE Alu 1 315 -3 4959 141 21 20 chr2 61319853 61320613 -191935970 - MER4D LTR ERV1 -139 764 1 1511 137 19 41 chr2 61320616 61320688 -191935895 - MSTA LTR MaLR 0 428 356 2153 114 3 0 chr2 61320688 61320978 -191935605 + AluSx SINE Alu 1 291 -21 1511 137 19 41 chr2 61320978 61321175 -191935408 - MSTA LTR MaLR -72 356 165 * 1637 184 55 3 chr2 61321173 61321521 -191935062 - MER65C LTR ERV1 -95 366 1 2464 83 136 8 chr2 61321524 61321921 -191934662 + LTR7 LTR ERV1 1 448 -2 6812 106 56 9 chr2 61321923 61323075 -191933508 + HERVH LTR ERV1 1 1206 -6507 8801 94 6 16 chr2 61323095 61324462 -191932121 + HERVH LTR ERV1 1635 2987 -4726 786 138 41 0 chr2 61324456 61324601 -191931982 + HERVH LTR ERV1 3140 3290 -4423 * 3252 102 6 2 chr2 61324591 61325091 -191931492 + HERVH LTR ERV1 3492 3993 -3720 4141 142 0 1 chr2 61325093 61325756 -191930827 + HERVH LTR ERV1 4488 5149 -2564 1291 124 18 9 chr2 61325757 61325975 -191930608 + HERVH LTR ERV1 5600 5819 -1894 2209 103 48 13 chr2 61325975 61326352 -191930231 + HERVH LTR ERV1 7324 7713 0 2478 77 148 5 chr2 61326352 61326744 -191929839 + LTR7 LTR ERV1 1 448 -2 2380 99 0 0 chr2 61327449 61327752 -191928831 - AluSc SINE Alu -6 303 1 21 0 0 0 chr2 61328293 61328314 -191928269 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr2 61328367 61328393 -191928190 + AT_rich Low_complexity Low_complexity 1 26 0 197 284 95 0 chr2 61329088 61329162 -191927421 + MIR SINE MIR 67 147 -115 332 316 25 19 chr2 61329505 61329663 -191926920 - MLT1L LTR MaLR -314 301 143 1794 168 0 0 chr2 61329907 61330187 -191926396 + AluJb SINE Alu 15 294 -18 286 191 0 24 chr2 61331362 61331446 -191925137 + (TA)n Simple_repeat Simple_repeat 2 83 0 22 0 0 0 chr2 61331882 61331904 -191924679 + AT_rich Low_complexity Low_complexity 1 22 0 356 40 20 0 chr2 61331969 61332019 -191924564 + (TA)n Simple_repeat Simple_repeat 1 51 0 1943 97 4 0 chr2 61332020 61332278 -191924305 - AluSc SINE Alu -16 293 35 201 74 0 0 chr2 61332404 61332431 -191924152 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 281 260 30 20 chr2 61332604 61332704 -191923879 + L1ME1 LINE L1 5972 6072 -94 * 30793 55 2 1 chr2 61332697 61336760 -191919823 + L1PA4 LINE L1 2 4067 -2079 9025 34 0 0 chr2 61336760 61338646 -191917937 + L1PA4 LINE L1 4286 6171 0 592 203 0 0 chr2 61338648 61338766 -191917817 + L1MB7 LINE L1 6058 6175 -9 22 0 0 0 chr2 61339116 61339138 -191917445 + AT_rich Low_complexity Low_complexity 1 22 0 196 308 39 51 chr2 61339343 61339421 -191917162 - MIR SINE MIR -176 86 10 256 293 128 30 chr2 61340412 61340545 -191916038 + MIR3 SINE MIR 1 146 -62 1657 213 3 0 chr2 61340551 61340847 -191915736 + AluJo SINE Alu 1 297 -15 23 0 0 0 chr2 61340847 61340870 -191915713 + AT_rich Low_complexity Low_complexity 1 23 0 253 263 0 0 chr2 61342360 61342417 -191914166 + L2 LINE L2 3257 3313 0 1023 221 3 53 chr2 61342635 61342938 -191913645 - L1MA10 LINE L1 -1 6333 6046 560 324 36 83 chr2 61343064 61343512 -191913071 - L2 LINE L2 -7 3265 2839 293 302 52 10 chr2 61343532 61343724 -191912859 - L1ME LINE L1 -278 5843 5644 586 322 21 8 chr2 61343733 61343972 -191912611 - MLT1L LTR MaLR -11 604 363 315 241 88 7 chr2 61344556 61344693 -191911890 - L1MC4a LINE L1 -1929 5879 5732 25 75 0 0 chr2 61344759 61344812 -191911771 + AT_rich Low_complexity Low_complexity 1 53 0 196 302 144 36 chr2 61346528 61346667 -191909916 - L2 LINE L2 -10 3303 3150 10362 195 69 15 chr2 61347644 61350591 -191905992 + L1MA4A LINE L1 4 3256 -3953 670 219 109 0 chr2 61350591 61350728 -191905855 + FRAM SINE Alu 1 147 -29 3545 207 27 6 chr2 61350758 61351609 -191904974 + L1MA4A LINE L1 3239 4107 -3101 557 246 15 15 chr2 61351610 61351744 -191904839 + AluJo SINE Alu 1 134 -178 1939 198 65 0 chr2 61351756 61351894 -191904689 + L1MA4A LINE L1 4094 4222 -2986 189 0 0 0 chr2 61351894 61351915 -191904668 + (CA)n Simple_repeat Simple_repeat 2 22 0 1939 198 65 0 chr2 61351915 61352302 -191904281 + L1MA4A LINE L1 4222 4653 -2555 21 57 0 0 chr2 61352302 61352337 -191904246 + AT_rich Low_complexity Low_complexity 1 35 0 1852 148 50 0 chr2 61352337 61352634 -191903949 + AluJb SINE Alu 1 312 0 366 173 38 83 chr2 61352646 61352686 -191903897 - MER33 DNA MER1_type -2409 176 136 1876 199 0 0 chr2 61352686 61352993 -191903590 + AluJb SINE Alu 1 307 -5 366 173 38 83 chr2 61352993 61353085 -191903498 - MER33 DNA MER1_type -2449 136 50 659 155 9 35 chr2 61353104 61353220 -191903363 - FLAM_C SINE Alu -16 127 15 314 231 0 0 chr2 61353230 61353295 -191903288 - MER3 DNA MER1_type -109 100 36 303 214 56 87 chr2 61353424 61353550 -191903033 + MIR SINE MIR 141 262 0 8653 169 10 6 chr2 61353732 61356455 -191900128 + L1MA4A LINE L1 4619 7353 -12 1231 156 18 18 chr2 61357097 61357315 -191899268 - MER20 DNA MER1_type -1 218 1 717 153 172 12 chr2 61357820 61357983 -191898600 - MER5A DNA MER1_type 0 189 1 1387 105 150 20 chr2 61358427 61358674 -191897909 + AluSg SINE Alu 16 294 -16 199 329 25 13 chr2 61358676 61358755 -191897828 - MIR SINE MIR -136 126 47 873 245 16 5 chr2 61359419 61359603 -191896980 - MER5A DNA MER1_type 0 189 4 222 290 267 8 chr2 61359804 61359935 -191896648 + MIR3 SINE MIR 23 187 -21 192 204 204 0 chr2 61360166 61360220 -191896363 + MIR SINE MIR 78 142 -66 23 33 0 0 chr2 61360785 61360815 -191895768 + AT_rich Low_complexity Low_complexity 1 30 0 24 67 0 0 chr2 61361889 61361934 -191894649 + AT_rich Low_complexity Low_complexity 1 45 0 992 213 38 0 chr2 61363615 61363826 -191892757 - MER20 DNA MER1_type 0 219 1 1684 153 50 6 chr2 61363845 61364165 -191892418 - L1MA10 LINE L1 -3 6331 5998 520 335 17 11 chr2 61367451 61367627 -191888956 + MIR3 SINE MIR 16 192 -16 225 222 0 0 chr2 61368107 61368152 -191888431 - MIR SINE MIR -63 145 101 703 201 0 88 chr2 61368159 61368353 -191888230 - MLT1K LTR MaLR -38 550 374 21 0 0 0 chr2 61369013 61369034 -191887549 + AT_rich Low_complexity Low_complexity 1 21 0 1260 224 56 18 chr2 61369124 61369463 -191887120 - MLT1C LTR MaLR 0 467 116 811 198 12 6 chr2 61369462 61369629 -191886954 - MLT1C LTR MaLR -299 168 1 * 258 302 42 41 chr2 61369835 61369985 -191886598 - MIR SINE MIR -65 197 53 199 343 131 17 chr2 61370152 61370327 -191886256 + L2 LINE L2 2223 2417 -897 313 127 42 28 chr2 61370790 61370861 -191885722 + L1MC2 LINE L1 6258 6329 -15 2134 129 0 7 chr2 61370861 61371164 -191885419 + AluSx SINE Alu 1 301 -11 23 0 0 0 chr2 61371219 61371242 -191885341 + AT_rich Low_complexity Low_complexity 1 23 0 252 250 197 23 chr2 61372698 61372830 -191883753 + L2 LINE L2 1943 2097 -1217 843 259 81 41 chr2 61372923 61373274 -191883309 + L1MA9 LINE L1 5867 6237 -75 183 80 0 0 chr2 61373274 61373299 -191883284 + (TA)n Simple_repeat Simple_repeat 2 26 0 843 259 81 41 chr2 61373299 61373340 -191883243 + L1MA9 LINE L1 6237 6275 -37 296 182 11 0 chr2 61373458 61373546 -191883037 + (TA)n Simple_repeat Simple_repeat 2 90 0 1200 247 23 73 chr2 61373557 61373942 -191882641 - MLT1A2 LTR MaLR -8 366 1 268 220 35 180 chr2 61373959 61374304 -191882279 - L2 LINE L2 -65 3248 2954 463 369 74 15 chr2 61374364 61374754 -191881829 + L2 LINE L2 2300 2712 -602 4037 221 17 25 chr2 61374765 61376217 -191880366 + L1MB8 LINE L1 4750 6177 -1 225 267 171 0 chr2 61376223 61376328 -191880255 + L1ME2 LINE L1 6032 6154 -10 376 285 21 35 chr2 61376342 61376486 -191880097 + L1MC5 LINE L1 7774 7915 -46 357 287 113 42 chr2 61376544 61376972 -191879611 + L2 LINE L2 2777 3280 -33 595 245 172 7 chr2 61377744 61377895 -191878688 - MER5A DNA MER1_type -3 186 11 213 322 154 14 chr2 61377959 61378102 -191878481 - L3b LINE CR1 -21 1562 1400 745 81 81 0 chr2 61379000 61379111 -191877472 + L1PA6 LINE L1 6035 6154 0 260 189 14 0 chr2 61379191 61379265 -191877318 + (CA)n Simple_repeat Simple_repeat 2 76 0 1141 257 54 43 chr2 61379489 61380248 -191876335 - L1MC5 LINE L1 -35 7926 7261 526 206 47 158 chr2 61380284 61380790 -191875793 - L1MC5 LINE L1 -753 7208 6759 1226 169 71 1 chr2 61380803 61381184 -191875399 - LOR1b LTR ERV1 0 461 1 1472 188 36 64 chr2 61381327 61381688 -191874895 - MLT1B LTR MaLR -39 351 1 308 309 57 57 chr2 61381705 61381951 -191874632 - L1MC4a LINE L1 -1149 6659 6414 1794 146 14 14 chr2 61382175 61382470 -191874113 - AluJb SINE Alu -11 301 7 370 253 157 28 chr2 61382493 61382671 -191873912 - L1MC4a LINE L1 -1636 6172 5972 1943 210 33 18 chr2 61383112 61383564 -191873019 - MLT1C LTR MaLR -8 459 1 2115 298 143 27 chr2 61383621 61384710 -191871873 - L2 LINE L2 -732 2582 1367 25 31 0 0 chr2 61385411 61385443 -191871140 + AT_rich Low_complexity Low_complexity 1 32 0 285 109 0 0 chr2 61385500 61385546 -191871037 + (TG)n Simple_repeat Simple_repeat 1 46 0 347 294 81 22 chr2 61386011 61386147 -191870436 - MIR SINE MIR -32 230 87 885 158 92 53 chr2 61386249 61386497 -191870086 - MLT2B1 LTR ERVL -1 519 189 1007 229 69 5 chr2 61386497 61386715 -191869868 + Tigger7 DNA MER2_type 2 233 -500 328 211 126 11 chr2 61386717 61386812 -191869771 + Tigger7 DNA MER2_type 2382 2487 0 943 189 17 0 chr2 61386820 61387000 -191869583 - MLT2B1 LTR ERVL -337 183 1 693 316 62 78 chr2 61387045 61387532 -191869051 + L2 LINE L2 2835 3313 0 266 349 47 8 chr2 61387581 61387710 -191868873 + L2 LINE L2 2680 2813 -501 207 69 0 0 chr2 61388679 61388708 -191867875 + (TGGA)n Simple_repeat Simple_repeat 2 30 0 42613 34 23 1 chr2 61388898 61394922 -191861661 - L1PA2 LINE L1 -3 6152 1 816 249 12 12 chr2 61395293 61395466 -191861117 + MLT1F LTR MaLR 4 176 -366 4037 291 76 30 chr2 61395497 61397169 -191859414 + MERVL-F LTR ERVL 3592 5339 -146 417 194 93 78 chr2 61397222 61397351 -191859232 - MER58C DNA MER1_type -6 209 79 359 269 39 0 chr2 61397427 61397505 -191859078 - MER58C DNA MER1_type -133 82 2 624 256 37 58 chr2 61397510 61397701 -191858882 + MERVL-F LTR ERVL 5570 5756 -8 956 222 114 26 chr2 61397701 61398191 -191858392 + MLT2F LTR ERVL 3 622 -41 798 284 120 29 chr2 61399331 61399724 -191856859 - L1ME3A LINE L1 -195 6044 5688 336 102 0 0 chr2 61399724 61399773 -191856810 + (TA)n Simple_repeat Simple_repeat 2 50 0 798 284 120 29 chr2 61399773 61400277 -191856306 - L1ME3A LINE L1 -551 5688 5062 494 286 84 35 chr2 61400380 61400607 -191855976 + MLT1J2 LTR MaLR 173 410 -40 2465 60 0 3 chr2 61400652 61400952 -191855631 - AluY SINE Alu -12 299 1 738 312 60 11 chr2 61400954 61401400 -191855183 - L1ME3A LINE L1 -1155 5060 4593 1815 203 54 42 chr2 61401483 61401980 -191854603 + MLT1D LTR MaLR 1 503 -2 2043 118 132 16 chr2 61402085 61402465 -191854118 + MSTA LTR MaLR 5 428 0 227 278 109 26 chr2 61402551 61402853 -191853730 - L1ME3A LINE L1 -4747 1649 1323 1926 168 0 3 chr2 61403121 61403424 -191853159 - AluJo SINE Alu -9 303 2 310 271 53 52 chr2 61405128 61405576 -191851007 + L1MEc LINE L1 1012 1522 -5008 825 267 18 27 chr2 61405797 61406022 -191850561 - MER58A DNA MER1_type 0 224 2 267 319 62 12 chr2 61406025 61406324 -191850259 + L1MEc LINE L1 1839 2142 -866 5048 238 43 40 chr2 61406818 61406919 -191849664 + L1MC3 LINE L1 3086 3185 -2961 1733 121 40 57 chr2 61406919 61407216 -191849367 - AluJo SINE Alu -20 292 1 5048 238 43 40 chr2 61407216 61408904 -191847679 + L1MC3 LINE L1 3185 4880 -1266 1664 209 21 91 chr2 61408904 61409434 -191847149 - MLT1D LTR MaLR 0 505 13 333 68 0 0 chr2 61409447 61409491 -191847092 + (T)n Simple_repeat Simple_repeat 1 44 0 5663 203 24 31 chr2 61409494 61411478 -191845105 + L1MC3 LINE L1 4869 5398 -748 710 149 0 0 chr2 61411467 61411588 -191844995 + L1MC3 LINE L1 7663 7783 -2 * 694 261 86 30 chr2 61411564 61411946 -191844637 + L1MEc LINE L1 2398 2800 -3740 * 225 258 30 0 chr2 61411962 61412028 -191844555 + MIR3 SINE MIR 132 199 -9 194 336 96 24 chr2 61413629 61413754 -191842829 - L2 LINE L2 -1 3271 3138 889 169 12 42 chr2 61413851 61414017 -191842566 - AluJb SINE Alu -6 306 146 2071 121 3 0 chr2 61414532 61414814 -191841769 + AluSq SINE Alu 1 283 -30 3751 129 11 11 chr2 61415392 61416012 -191840571 + L1MC1 LINE L1 5714 6333 0 3963 127 42 82 chr2 61416201 61417028 -191839555 - L1PB4 LINE L1 0 6156 5363 325 319 141 18 chr2 61418015 61418178 -191838405 - MIR3 SINE MIR -9 199 17 13976 127 23 60 chr2 61418278 61418909 -191837674 + Tigger1 DNA MER2_type 1 654 -1764 1909 140 11 0 chr2 61418909 61419188 -191837395 + AluSx SINE Alu 1 282 -30 13976 127 23 60 chr2 61419188 61420771 -191835812 + Tigger1 DNA MER2_type 654 2295 -123 890 209 0 0 chr2 61420771 61420934 -191835649 + FRAM SINE Alu 1 163 -3 13976 127 23 60 chr2 61420934 61421119 -191835464 + Tigger1 DNA MER2_type 2295 2305 -113 2278 94 0 3 chr2 61421119 61421418 -191835165 - AluSp SINE Alu -15 298 1 13976 127 23 60 chr2 61421418 61421526 -191835057 + Tigger1 DNA MER2_type 2305 2416 -2 21 57 0 0 chr2 61422413 61422448 -191834135 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr2 61422696 61422718 -191833865 + AT_rich Low_complexity Low_complexity 1 22 0 182 345 0 0 chr2 61422896 61422954 -191833629 - L2 LINE L2 0 3272 3215 221 311 216 0 chr2 61423401 61423475 -191833108 + L2 LINE L2 3163 3252 -20 314 288 81 16 chr2 61423505 61423627 -191832956 - MIR SINE MIR -65 143 28 1898 238 60 71 chr2 61424072 61424609 -191831974 - MLT1F LTR MaLR -9 533 3 2461 44 0 3 chr2 61425701 61425995 -191830588 - AluY SINE Alu -18 293 1 674 229 6 0 chr2 61426089 61426268 -191830315 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 792 221 147 0 chr2 61426944 61427148 -191829435 - MIR SINE MIR -27 235 2 442 294 104 38 chr2 61427385 61427840 -191828743 + LTR33A LTR ERVL 2 523 0 257 220 60 12 chr2 61428007 61428175 -191828408 + (TA)n Simple_repeat Simple_repeat 2 177 0 353 110 49 0 chr2 61428483 61428565 -191828018 + GA-rich Low_complexity Low_complexity 3 88 0 21 57 0 0 chr2 61428838 61428873 -191827710 + AT_rich Low_complexity Low_complexity 1 35 0 21 57 0 0 chr2 61429372 61429407 -191827176 + AT_rich Low_complexity Low_complexity 1 35 0 188 303 15 15 chr2 61431207 61431273 -191825310 - MIR SINE MIR -118 90 25 2111 108 0 7 chr2 61431637 61431916 -191824667 + AluSx SINE Alu 4 280 -32 258 32 0 0 chr2 61432178 61432209 -191824374 + (TG)n Simple_repeat Simple_repeat 2 32 0 197 275 0 29 chr2 61432508 61432577 -191824006 - MIR SINE MIR -191 71 5 340 262 137 42 chr2 61432818 61433067 -191823516 - MLT1H LTR MaLR 0 549 230 251 111 111 0 chr2 61433520 61433565 -191823018 + L1PA11 LINE L1 6125 6174 0 2398 76 7 0 chr2 61433886 61434189 -191822394 + AluSp SINE Alu 1 305 -8 213 304 22 11 chr2 61435572 61435664 -191820919 + GA-rich Low_complexity Low_complexity 3 95 0 336 315 95 42 chr2 61435734 61435975 -191820608 + L1M2 LINE L1 829 1082 -5767 270 0 0 0 chr2 61436014 61436044 -191820539 + (CTG)n Simple_repeat Simple_repeat 3 32 0 203 253 0 58 chr2 61436336 61436423 -191820160 + C-rich Low_complexity Low_complexity 4 85 0 30 0 0 0 chr2 61440683 61440713 -191815870 + AT_rich Low_complexity Low_complexity 1 30 0 191 35 0 35 chr2 61440713 61440742 -191815841 + (TATAA)n Simple_repeat Simple_repeat 1 28 0 2186 199 28 30 chr2 61441340 61441833 -191814750 - MLT1D LTR MaLR -8 497 6 929 293 109 42 chr2 61441903 61442354 -191814229 - LTR16C LTR ERVL -9 482 2 588 196 83 15 chr2 61444074 61444207 -191812376 - MER5B DNA MER1_type -34 144 3 216 271 133 96 chr2 61444241 61444429 -191812154 - MIR3 SINE MIR 0 208 14 * 466 259 224 0 chr2 61444425 61444568 -191812015 + MER5A DNA MER1_type 9 183 -6 256 250 0 0 chr2 61444615 61444663 -191811920 + L2 LINE L2 3188 3235 -37 2371 87 3 10 chr2 61445411 61445720 -191810863 - AluSx SINE Alu -5 307 1 1382 160 95 0 chr2 61445900 61446194 -191810389 + MER33 DNA MER1_type 3 324 0 21 0 0 0 chr2 61446417 61446438 -191810145 + AT_rich Low_complexity Low_complexity 1 21 0 195 42 0 0 chr2 61447364 61447388 -191809195 + (TTTAG)n Simple_repeat Simple_repeat 3 26 0 339 228 47 128 chr2 61448406 61448470 -191808113 + MIR3 SINE MIR 66 134 -74 180 0 0 0 chr2 61448470 61448490 -191808093 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1737 161 33 4 chr2 61448492 61448766 -191807817 - AluSx SINE Alu -30 282 1 339 228 47 128 chr2 61448766 61448847 -191807736 + MIR3 SINE MIR 135 202 -6 21 0 0 0 chr2 61449292 61449313 -191807270 + AT_rich Low_complexity Low_complexity 1 21 0 225 0 0 0 chr2 61451230 61451255 -191805328 + (TA)n Simple_repeat Simple_repeat 2 26 0 592 246 139 21 chr2 61452097 61452284 -191804299 - MER63A DNA MER1_type -1 209 1 953 221 67 0 chr2 61453972 61454212 -191802371 + MER112 DNA MER1_type 1 256 0 27 0 0 0 chr2 61454384 61454411 -191802172 + AT_rich Low_complexity Low_complexity 1 27 0 25 51 0 0 chr2 61454787 61454826 -191801757 + AT_rich Low_complexity Low_complexity 1 39 0 195 335 62 50 chr2 61455214 61455572 -191801011 + L2 LINE L2 2383 2744 -570 186 336 48 0 chr2 61455553 61455657 -191800926 + L2 LINE L2 2950 3058 -214 * 1066 268 102 22 chr2 61457075 61457783 -191798800 + L2 LINE L2 2541 3312 -1 1042 272 184 53 chr2 61458677 61459372 -191797211 + L2 LINE L2 1796 2581 -733 245 159 68 0 chr2 61459506 61459550 -191797033 + L2 LINE L2 3267 3313 0 23 0 0 0 chr2 61459680 61459703 -191796880 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 61460926 61460954 -191795629 + AT_rich Low_complexity Low_complexity 1 28 0 2537 55 13 0 chr2 61461180 61461487 -191795096 - AluY SINE Alu 0 311 1 2375 93 3 0 chr2 61461927 61462229 -191794354 + AluSx SINE Alu 1 303 -9 4374 267 95 18 chr2 61463016 61464475 -191792108 - L2 LINE L2 0 3313 1701 794 216 96 45 chr2 61464475 61464674 -191791909 + MER63A DNA MER1_type 2 210 0 4374 267 95 18 chr2 61464674 61464915 -191791668 - L2 LINE L2 -1612 1701 1480 230 349 0 0 chr2 61465453 61465536 -191791047 - L2 LINE L2 0 3313 3231 2365 68 0 40 chr2 61465734 61466056 -191790527 - AluY SINE Alu -2 309 1 283 307 79 0 chr2 61466611 61466712 -191789871 - MIR SINE MIR -108 154 46 27 0 0 0 chr2 61466896 61466923 -191789660 + AT_rich Low_complexity Low_complexity 1 27 0 261 0 0 0 chr2 61467218 61467247 -191789336 + (CAA)n Simple_repeat Simple_repeat 2 30 0 335 322 0 12 chr2 61468174 61468345 -191788238 + CT-rich Low_complexity Low_complexity 1 169 0 29 28 0 0 chr2 61470612 61470648 -191785935 + AT_rich Low_complexity Low_complexity 1 36 0 3259 129 3 44 chr2 61470660 61470842 -191785741 - L1PB1 LINE L1 -17 6134 5946 2080 118 7 3 chr2 61470842 61471138 -191785445 - AluSx SINE Alu -15 297 1 3259 129 3 44 chr2 61471138 61471318 -191785265 - L1PB1 LINE L1 -205 5946 5801 312 27 0 0 chr2 61471318 61471355 -191785228 + (TG)n Simple_repeat Simple_repeat 2 38 0 3259 129 3 44 chr2 61471355 61471555 -191785028 - L1PB1 LINE L1 -350 5801 5594 26 30 0 0 chr2 61471779 61471812 -191784771 + AT_rich Low_complexity Low_complexity 1 33 0 26 50 0 0 chr2 61472063 61472103 -191784480 + AT_rich Low_complexity Low_complexity 1 40 0 310 221 0 156 chr2 61472653 61472775 -191783808 - L1MC4 LINE L1 -1326 6716 6614 181 306 0 0 chr2 61473115 61473151 -191783432 + MIR SINE MIR 32 67 -141 2011 122 35 3 chr2 61473555 61473841 -191782742 - AluSx SINE Alu -17 295 1 198 258 0 0 chr2 61474236 61474298 -191782285 + (TA)n Simple_repeat Simple_repeat 1 62 0 289 307 99 25 chr2 61477786 61477988 -191778595 + MIR SINE MIR 20 236 -26 2444 83 0 3 chr2 61478959 61479271 -191777312 + AluSq SINE Alu 1 311 -2 23 0 0 0 chr2 61479523 61479546 -191777037 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 61479821 61479844 -191776739 + AT_rich Low_complexity Low_complexity 1 23 0 244 163 0 0 chr2 61480138 61480181 -191776402 - HAL1b LINE L1 -559 789 747 385 289 58 50 chr2 61480379 61480430 -191776153 - HAL1 LINE L1 -1426 1081 1032 261 0 0 0 chr2 61480430 61480459 -191776124 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 385 289 58 50 chr2 61480459 61480649 -191775934 - HAL1 LINE L1 -1475 1032 838 193 349 62 27 chr2 61481379 61481525 -191775058 - L2 LINE L2 -595 2719 2569 2076 119 24 3 chr2 61481784 61482079 -191774504 - AluSx SINE Alu -11 301 1 203 167 0 0 chr2 61482214 61482250 -191774333 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 229 388 20 0 chr2 61483256 61483354 -191773229 - MIR SINE MIR -74 134 35 195 406 10 0 chr2 61483610 61483706 -191772877 - MIR3 SINE MIR -10 198 102 328 252 75 11 chr2 61483999 61484140 -191772443 + MER5A DNA MER1_type 11 178 0 483 205 41 8 chr2 61484958 61485080 -191771503 - MER69A DNA AcHobo -1 176 51 717 207 83 0 chr2 61485267 61485412 -191771171 + FRAM SINE Alu 1 156 -20 2054 120 0 0 chr2 61485439 61485768 -191770815 + AluSx SINE Alu 1 329 0 228 287 0 0 chr2 61487473 61487574 -191769009 + (TA)n Simple_repeat Simple_repeat 1 101 0 603 287 56 5 chr2 61487788 61487983 -191768600 + MIR SINE MIR 57 261 -1 2434 159 36 7 chr2 61488683 61489097 -191767486 - MSTB LTR MaLR 0 426 1 792 183 0 0 chr2 61489148 61489279 -191767304 - FLAM_A SINE Alu -2 131 1 354 377 88 36 chr2 61489307 61490036 -191766547 + L2 LINE L2 1963 2729 -585 2142 136 0 0 chr2 61490137 61490439 -191766144 - AluSx SINE Alu -10 302 1 470 284 195 9 chr2 61490526 61490741 -191765842 + MIR SINE MIR 8 262 0 21 0 0 0 chr2 61491912 61491933 -191764650 + AT_rich Low_complexity Low_complexity 1 21 0 653 241 126 29 chr2 61492064 61492271 -191764312 - MIR SINE MIR -17 245 19 1720 188 38 70 chr2 61493009 61493509 -191763074 - MER31A LTR ERV1 -1 484 1 301 341 32 8 chr2 61493927 61494053 -191762530 - MIR3 SINE MIR -74 134 6 1640 209 60 13 chr2 61494358 61494837 -191761746 - LTR27 LTR ERV1 0 501 26 25 0 0 0 chr2 61496995 61497020 -191759563 + AT_rich Low_complexity Low_complexity 1 25 0 2653 90 16 8 chr2 61497043 61497410 -191759173 + THE1C LTR MaLR 1 370 -5 2061 123 25 0 chr2 61497461 61497746 -191758837 + AluSx SINE Alu 1 292 -20 1227 290 114 11 chr2 61497789 61498446 -191758137 + L2 LINE L2 2476 3181 -132 222 246 16 111 chr2 61498488 61498614 -191757969 + L2 LINE L2 3180 3293 -20 303 285 96 50 chr2 61498822 61499103 -191757480 - L1M4 LINE L1 -1366 4780 4487 2284 111 0 0 chr2 61499129 61499435 -191757148 + AluSx SINE Alu 1 306 -6 1520 182 0 58 chr2 61500178 61500326 -191756257 + AluJo SINE Alu 1 124 -188 1909 90 48 0 chr2 61500326 61500628 -191755955 + AluSg SINE Alu 1 315 0 1520 182 0 58 chr2 61500628 61500791 -191755792 + AluJo SINE Alu 124 295 -17 26 50 0 0 chr2 61502135 61502175 -191754408 + AT_rich Low_complexity Low_complexity 1 40 0 31 44 0 0 chr2 61504184 61504229 -191752354 + AT_rich Low_complexity Low_complexity 1 45 0 345 298 119 74 chr2 61504622 61505041 -191751542 + L2 LINE L2 2835 3272 0 253 307 11 0 chr2 61505730 61505818 -191750765 + CT-rich Low_complexity Low_complexity 2 90 0 2369 78 0 7 chr2 61506006 61506314 -191750269 + AluSp SINE Alu 1 306 -7 2055 124 17 0 chr2 61506802 61507092 -191749491 + AluSx SINE Alu 1 295 -17 1703 235 101 46 chr2 61507418 61508158 -191748425 - MER20B DNA MER1_type -1 783 3 1139 319 77 0 chr2 61508571 61508975 -191747608 - LTR16A LTR ERVL 0 450 16 2066 138 7 0 chr2 61510113 61510417 -191746166 + AluJb SINE Alu 1 306 -6 226 224 0 26 chr2 61560667 61560743 -191695840 + G-rich Low_complexity Low_complexity 3 76 0 1965 112 56 14 chr2 61563535 61563820 -191692763 - AluSx SINE Alu -11 301 5 2273 94 0 3 chr2 61564737 61565034 -191691549 - AluY SINE Alu -15 296 1 23 0 0 0 chr2 61565832 61565855 -191690728 + AT_rich Low_complexity Low_complexity 1 23 0 26 50 0 0 chr2 61566303 61566343 -191690240 + AT_rich Low_complexity Low_complexity 1 40 0 698 173 8 0 chr2 61566860 61566987 -191689596 - MER63B DNA MER1_type 0 435 308 203 0 37 0 chr2 61566993 61567020 -191689563 + (TA)n Simple_repeat Simple_repeat 1 28 0 921 159 14 14 chr2 61567030 61567175 -191689408 - FRAM SINE Alu -31 145 1 986 261 55 0 chr2 61567175 61567466 -191689117 - MER63B DNA MER1_type -124 312 6 283 267 58 12 chr2 61568726 61568812 -191687771 - MIR SINE MIR -65 143 54 261 264 14 0 chr2 61569694 61569766 -191686817 + MIR3 SINE MIR 135 207 -1 2493 106 19 8 chr2 61569856 61570216 -191686367 + THE1B LTR MaLR 1 364 0 647 213 15 81 chr2 61570236 61570433 -191686150 + L1ME3A LINE L1 5934 6117 -53 897 149 8 175 chr2 61570603 61570704 -191685879 + MER58 DNA MER1_type 2 118 -223 1750 112 23 27 chr2 61570704 61570962 -191685621 - AluSc SINE Alu -52 257 1 897 149 8 175 chr2 61570962 61571015 -191685568 + MER58 DNA MER1_type 118 178 -163 1644 175 7 7 chr2 61571015 61571306 -191685277 + AluJo SINE Alu 7 297 -15 897 149 8 175 chr2 61571306 61571370 -191685213 + MER58 DNA MER1_type 178 172 -169 2273 89 0 17 chr2 61571370 61571672 -191684911 + AluSp SINE Alu 1 297 -16 897 149 8 175 chr2 61571672 61571719 -191684864 + MER58 DNA MER1_type 171 224 -117 207 0 0 0 chr2 61572348 61572371 -191684212 + (CA)n Simple_repeat Simple_repeat 1 23 0 1842 161 23 16 chr2 61572703 61573013 -191683570 - AluJo SINE Alu 0 312 1 267 258 16 118 chr2 61573206 61573392 -191683191 + MIR SINE MIR 6 172 -90 2318 96 3 13 chr2 61573485 61573798 -191682785 + AluSp SINE Alu 3 312 -1 516 332 143 24 chr2 61573984 61574439 -191682144 - L2 LINE L2 0 3313 2805 1332 86 0 0 chr2 61574485 61574660 -191681923 + AluY SINE Alu 130 304 -7 199 290 116 0 chr2 61574670 61574739 -191681844 - L2 LINE L2 -625 2689 2613 1400 221 39 82 chr2 61576838 61577403 -191679180 - MER39 LTR ERV1 -4 703 8 2139 121 0 16 chr2 61577765 61578070 -191678513 - AluSx SINE Alu -12 300 1 730 195 86 36 chr2 61582394 61582615 -191673968 - L1MD2 LINE L1 -18 6341 6110 320 238 105 0 chr2 61582693 61582829 -191673754 - L1MC4 LINE L1 -1300 7022 1976 1889 160 12 26 chr2 61583168 61583512 -191673071 - MER58B DNA MER1_type -2 339 1 2195 131 0 3 chr2 61585087 61585400 -191671183 - AluSx SINE Alu 0 312 1 897 205 41 115 chr2 61585493 61585884 -191670699 - MER39 LTR ERV1 -45 662 301 313 243 92 79 chr2 61585859 61586011 -191670572 - LTR48B LTR ERV1 -487 157 4 * 1959 107 3 62 chr2 61586675 61586984 -191669599 - AluSx SINE Alu -21 291 1 289 344 135 12 chr2 61587681 61587844 -191668739 + MIR3 SINE MIR 14 196 -12 290 286 47 64 chr2 61587942 61588113 -191668470 + MIR SINE MIR 45 212 -50 22 0 0 0 chr2 61588653 61588675 -191667908 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr2 61588717 61588743 -191667840 + AT_rich Low_complexity Low_complexity 1 26 0 1944 150 17 0 chr2 61589306 61589599 -191666984 + AluSx SINE Alu 1 298 -14 2277 105 3 0 chr2 61589908 61590204 -191666379 + AluSx SINE Alu 3 299 -13 231 352 17 57 chr2 61590686 61590862 -191665721 - MIR SINE MIR -51 211 43 2419 78 0 0 chr2 61591245 61591541 -191665042 - AluY SINE Alu -14 297 2 511 208 139 7 chr2 61591569 61591713 -191664870 - L1ME3A LINE L1 -5 6165 6003 250 154 39 0 chr2 61591736 61591788 -191664795 - L1PA16 LINE L1 -16 6150 6097 * 3992 107 24 1 chr2 61591774 61592484 -191664099 - L1PA16 LINE L1 -311 5855 5129 23 0 0 0 chr2 61592610 61592633 -191663950 + AT_rich Low_complexity Low_complexity 1 23 0 925 71 7 14 chr2 61594748 61594888 -191661695 + (TTTC)n Simple_repeat Simple_repeat 2 140 0 2026 124 0 11 chr2 61594890 61595173 -191661410 - AluSx SINE Alu -32 280 1 1971 153 0 3 chr2 61595242 61595555 -191661028 - AluJb SINE Alu 0 312 1 1052 110 26 7 chr2 61596488 61596643 -191659940 - L1MC1 LINE L1 -14 6319 6162 277 315 30 128 chr2 61596996 61597485 -191659098 - L2 LINE L2 -43 3229 2776 182 231 15 0 chr2 61598025 61598090 -191658493 + (TA)n Simple_repeat Simple_repeat 2 67 0 201 195 0 0 chr2 61598097 61598138 -191658445 + (CA)n Simple_repeat Simple_repeat 1 41 0 21 0 0 0 chr2 61599299 61599320 -191657263 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 61599729 61599754 -191656829 + AT_rich Low_complexity Low_complexity 1 25 0 364 287 16 0 chr2 61601292 61601421 -191655162 + (TA)n Simple_repeat Simple_repeat 2 132 0 21 0 0 0 chr2 61601452 61601473 -191655110 + AT_rich Low_complexity Low_complexity 1 21 0 210 118 0 0 chr2 61601484 61601518 -191655065 + (TCCA)n Simple_repeat Simple_repeat 4 37 0 2272 59 42 0 chr2 61601898 61602185 -191654398 - AluY SINE Alu -12 299 1 338 307 26 0 chr2 61602209 61602323 -191654260 - MLT1L LTR MaLR -328 287 171 309 312 72 0 chr2 61603043 61603181 -191653402 - MIR SINE MIR -74 188 41 459 0 0 0 chr2 61603215 61603266 -191653317 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 216 258 15 83 chr2 61603268 61603400 -191653183 - L2 LINE L2 -74 3239 3117 256 350 115 46 chr2 61603551 61603678 -191652905 - L2 LINE L2 -425 2889 2738 1867 145 3 3 chr2 61603678 61603980 -191652603 + AluSx SINE Alu 1 302 0 256 350 115 46 chr2 61603980 61604068 -191652515 - L2 LINE L2 -576 2738 2658 707 192 73 18 chr2 61604873 61605175 -191651408 + MSTD LTR MaLR 5 396 0 363 313 75 50 chr2 61605366 61605526 -191651057 + L2 LINE L2 2931 3094 -178 2305 98 0 3 chr2 61605715 61606021 -191650562 - AluSq SINE Alu -8 305 1 1666 197 7 0 chr2 61606096 61606400 -191650183 - AluJo SINE Alu -5 307 2 215 333 62 0 chr2 61610717 61610798 -191645785 + L3 LINE CR1 1491 1576 -1 2694 26 0 7 chr2 61613858 61614168 -191642415 - AluY SINE Alu -3 308 1 457 238 172 0 chr2 61616467 61616618 -191639965 - MER5A DNA MER1_type -1 188 12 301 324 22 7 chr2 61617411 61617547 -191639036 + CT-rich Low_complexity Low_complexity 3 140 0 22 0 0 0 chr2 61617547 61617569 -191639014 + AT_rich Low_complexity Low_complexity 1 22 0 225 289 47 2 chr2 61618097 61618200 -191638383 + MIR SINE MIR 66 177 -31 1348 261 228 21 chr2 61618259 61619087 -191637496 - L2 LINE L2 -52 3261 2239 2014 109 0 4 chr2 61619109 61619385 -191637198 - AluSx SINE Alu -17 295 21 2449 108 37 3 chr2 61619574 61619926 -191636657 - THE1B LTR MaLR 0 364 1 638 325 35 53 chr2 61621115 61621568 -191635015 - MLT1J2 LTR MaLR -5 445 1 22 0 0 0 chr2 61621730 61621752 -191634831 + AT_rich Low_complexity Low_complexity 1 22 0 3362 154 18 8 chr2 61621808 61622407 -191634176 + MER6A DNA MER2_type 1 605 0 320 256 58 66 chr2 61622546 61622683 -191633900 - MIR SINE MIR -6 256 121 31 0 0 0 chr2 61623556 61623587 -191632996 + AT_rich Low_complexity Low_complexity 1 31 0 282 56 0 0 chr2 61624971 61625007 -191631576 + (TA)n Simple_repeat Simple_repeat 2 37 0 220 232 36 0 chr2 61625763 61625819 -191630764 - MIR SINE MIR -95 167 110 540 50 100 0 chr2 61626179 61626458 -191630125 + (TA)n Simple_repeat Simple_repeat 1 307 0 7317 38 6 0 chr2 61626458 61627849 -191628734 - L1PA5 LINE L1 -8 6146 4751 485 331 66 33 chr2 61628259 61628399 -191628184 + MIR SINE MIR 11 164 -98 1866 129 7 0 chr2 61628399 61628671 -191627912 + AluJb SINE Alu 38 311 -1 485 331 66 33 chr2 61628671 61628772 -191627811 + MIR SINE MIR 164 260 -2 1571 206 7 16 chr2 61629133 61629439 -191627144 + AluJb SINE Alu 1 303 -9 312 291 74 34 chr2 61630509 61630657 -191625926 + MIR SINE MIR 7 143 -65 2432 89 3 0 chr2 61632301 61632604 -191623979 - AluSp SINE Alu -9 304 1 399 241 214 0 chr2 61634310 61634422 -191622161 - MER5A DNA MER1_type -1 188 53 272 266 156 37 chr2 61635835 61635944 -191620639 - MIR SINE MIR -68 140 19 24 0 0 0 chr2 61635997 61636021 -191620562 + AT_rich Low_complexity Low_complexity 1 24 0 1165 107 0 0 chr2 61636021 61636171 -191620412 - AluSg/x SINE Alu -26 284 135 2029 118 0 4 chr2 61637363 61637663 -191618920 + AluSx SINE Alu 12 310 0 2332 81 3 7 chr2 61639001 61639311 -191617272 - AluSp SINE Alu -4 309 1 257 325 89 64 chr2 61639471 61639751 -191616832 + L2 LINE L2 2986 3272 0 2038 129 0 3 chr2 61641142 61641451 -191615132 - AluSx SINE Alu 0 308 1 862 279 96 17 chr2 61642085 61642440 -191614143 + L2 LINE L2 2927 3309 -4 273 152 45 15 chr2 61642483 61642549 -191614034 - L1ME4a LINE L1 -66 6055 5988 229 395 105 6 chr2 61642647 61642809 -191613774 + MER5B DNA MER1_type 1 178 0 518 258 66 54 chr2 61642947 61643007 -191613576 - MIR SINE MIR -1 261 203 2145 181 3 0 chr2 61643007 61643372 -191613211 - MER47A DNA MER2_type 0 366 1 518 258 66 54 chr2 61643372 61643544 -191613039 - MIR SINE MIR -59 203 26 21 0 0 0 chr2 61643558 61643579 -191613004 + AT_rich Low_complexity Low_complexity 1 21 0 349 289 151 0 chr2 61643682 61643848 -191612735 + MIR SINE MIR 70 260 -2 647 333 83 45 chr2 61644742 61645210 -191611373 + L2 LINE L2 1789 2274 -1040 2345 93 0 7 chr2 61645297 61645599 -191610984 - AluSx SINE Alu -12 300 1 459 289 158 61 chr2 61645785 61646214 -191610369 + L2 LINE L2 2841 3311 -2 464 93 13 0 chr2 61647639 61647714 -191608869 + (TCTA)n Simple_repeat Simple_repeat 2 77 0 22 56 0 0 chr2 61647727 61647763 -191608820 + AT_rich Low_complexity Low_complexity 1 36 0 245 349 145 28 chr2 61647768 61648023 -191608560 + L3 LINE CR1 1247 1531 -46 636 274 66 25 chr2 61648099 61648340 -191608243 + MER102b DNA MER1_type 81 331 -10 233 206 27 27 chr2 61650319 61650392 -191606191 - MER116 DNA Mariner -5 75 3 307 370 0 8 chr2 61651512 61651631 -191604952 - MIR SINE MIR -51 211 94 2270 98 0 0 chr2 61652637 61652933 -191603650 - AluY SINE Alu -15 296 1 23 0 0 0 chr2 61653001 61653024 -191603559 + AT_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr2 61654238 61654258 -191602325 + (A)n Simple_repeat Simple_repeat 1 20 0 228 35 0 0 chr2 61654261 61654290 -191602293 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 339 130 0 0 chr2 61655220 61655274 -191601309 + (TA)n Simple_repeat Simple_repeat 1 54 0 1289 154 5 9 chr2 61656528 61656742 -191599841 - AluJo SINE Alu -5 307 95 294 294 10 20 chr2 61656947 61657049 -191599534 + L1ME LINE L1 5581 5681 -440 423 0 0 0 chr2 61658146 61658193 -191598390 + (CA)n Simple_repeat Simple_repeat 2 48 0 614 95 11 0 chr2 61658411 61658506 -191598077 + (TA)n Simple_repeat Simple_repeat 1 96 0 230 254 3 38 chr2 61658941 61659047 -191597536 + MIR3 SINE MIR 71 174 -34 236 286 75 22 chr2 61659224 61659342 -191597241 + L1ME LINE L1 5487 5605 -559 1594 212 131 38 chr2 61659426 61660013 -191596570 + L1ME2 LINE L1 5487 6164 0 510 285 173 22 chr2 61661266 61661543 -191595040 + L3 LINE CR1 1246 1564 -13 218 307 71 57 chr2 61661675 61661815 -191594768 - L3 LINE CR1 -75 1502 1361 1627 201 64 10 chr2 61661817 61661923 -191594660 + Charlie1b DNA MER1_type 3 102 -2659 1565 104 5 0 chr2 61661923 61662134 -191594449 - AluY SINE Alu -9 302 91 1627 201 64 10 chr2 61662134 61662415 -191594168 + Charlie1b DNA MER1_type 102 411 -112 2627 127 3 8 chr2 61662420 61662806 -191593777 - MER4E LTR ERV1 -28 751 368 284 111 0 0 chr2 61662792 61662837 -191593746 + Charlie1b DNA MER1_type 403 447 -76 * 2008 122 30 0 chr2 61662910 61663205 -191593378 + AluSx SINE Alu 1 304 -8 1221 348 72 25 chr2 61663211 61663944 -191592639 - L3 LINE CR1 -223 1354 587 330 342 60 0 chr2 61665092 61665209 -191591374 - L2 LINE L2 -5 3267 3144 32 86 0 0 chr2 61666146 61666227 -191590356 + AT_rich Low_complexity Low_complexity 1 81 0 552 259 26 78 chr2 61666628 61666860 -191589723 - MIR SINE MIR -24 238 19 240 301 53 23 chr2 61667062 61667195 -191589388 - MLT1J LTR MaLR -51 460 324 458 286 83 33 chr2 61667245 61667486 -191589097 - MLT1J LTR MaLR -258 253 1 189 0 0 0 chr2 61667848 61667869 -191588714 + (TG)n Simple_repeat Simple_repeat 1 21 0 389 230 54 30 chr2 61668212 61668359 -191588224 - MLT1I LTR MaLR -10 440 291 217 132 0 0 chr2 61670527 61670565 -191586018 + (T)n Simple_repeat Simple_repeat 1 38 0 28 0 0 0 chr2 61671205 61671233 -191585350 + AT_rich Low_complexity Low_complexity 1 28 0 298 280 0 0 chr2 61671895 61671970 -191584613 + CT-rich Low_complexity Low_complexity 1 75 0 24 32 0 0 chr2 61672896 61672927 -191583656 + AT_rich Low_complexity Low_complexity 1 31 0 198 171 0 0 chr2 61673444 61673485 -191583098 + (CA)n Simple_repeat Simple_repeat 1 41 0 188 135 27 0 chr2 61674762 61674799 -191581784 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 180 0 0 0 chr2 61675424 61675444 -191581139 + (T)n Simple_repeat Simple_repeat 1 20 0 22 88 0 0 chr2 61676773 61676830 -191579753 + AT_rich Low_complexity Low_complexity 1 57 0 1392 176 101 16 chr2 61677327 61677634 -191578949 - MER46C DNA MER2_type -3 335 3 368 264 38 28 chr2 61677786 61677892 -191578691 - L2 LINE L2 -10 3303 3197 327 49 0 0 chr2 61677934 61677975 -191578608 + (CA)n Simple_repeat Simple_repeat 1 41 0 304 317 59 5 chr2 61678047 61678233 -191578350 + MER117 DNA MER1_type 1 196 -1 21 0 0 0 chr2 61679910 61679931 -191576652 + AT_rich Low_complexity Low_complexity 1 21 0 445 278 173 4 chr2 61680435 61680690 -191575893 + LTR16B LTR ERVL 3 300 -164 237 239 0 0 chr2 61680736 61680782 -191575801 + LTR16B LTR ERVL 419 464 0 185 280 113 65 chr2 61681115 61681283 -191575300 - L2 LINE L2 0 3313 3138 408 207 51 26 chr2 61681509 61681607 -191574976 + MER5A DNA MER1_type 10 98 -80 184 247 34 67 chr2 61681527 61681616 -191574967 - MER5A DNA MER1_type -13 176 91 * 25 51 0 0 chr2 61681880 61681919 -191574664 + AT_rich Low_complexity Low_complexity 1 39 0 825 189 41 0 chr2 61683960 61684129 -191572454 + MER5B DNA MER1_type 1 176 -2 292 289 67 11 chr2 61686559 61686649 -191569934 - MER5A DNA MER1_type -94 95 1 857 124 5 129 chr2 61688300 61688502 -191568081 + MER5B DNA MER1_type 2 178 0 213 217 50 17 chr2 61688799 61688859 -191567724 + MIR SINE MIR 94 155 -107 189 147 0 0 chr2 61689640 61689674 -191566909 + (TG)n Simple_repeat Simple_repeat 1 34 0 195 129 0 0 chr2 61690082 61690113 -191566470 + (A)n Simple_repeat Simple_repeat 1 31 0 253 327 91 30 chr2 61691209 61691374 -191565209 + MER5A DNA MER1_type 10 184 -5 220 109 22 22 chr2 61691700 61691746 -191564837 + CT-rich Low_complexity Low_complexity 2 47 0 21 0 0 0 chr2 61692048 61692069 -191564514 + AT_rich Low_complexity Low_complexity 1 21 0 575 259 74 45 chr2 61692646 61692889 -191563694 - LTR16A1 LTR ERVL -204 253 4 251 313 172 0 chr2 61693186 61693285 -191563298 + MIR SINE MIR 37 152 -56 28 29 0 0 chr2 61695390 61695425 -191561158 + AT_rich Low_complexity Low_complexity 1 35 0 21 71 0 0 chr2 61695607 61695649 -191560934 + AT_rich Low_complexity Low_complexity 1 42 0 21 57 0 0 chr2 61698572 61698607 -191557976 + AT_rich Low_complexity Low_complexity 1 35 0 2097 171 29 3 chr2 61699433 61699813 -191556770 - MLT1B LTR MaLR 0 390 1 668 274 42 0 chr2 61700060 61700250 -191556333 + MIR SINE MIR 61 258 -4 1547 188 21 0 chr2 61700898 61701027 -191555556 + AluJb SINE Alu 3 128 -184 207 88 0 0 chr2 61701027 61701061 -191555522 + (TA)n Simple_repeat Simple_repeat 1 34 0 1547 188 21 0 chr2 61701061 61701218 -191555365 + AluJb SINE Alu 128 295 -17 1284 161 0 9 chr2 61701392 61701616 -191554967 - AluJb SINE Alu -4 308 87 21 0 0 0 chr2 61701729 61701750 -191554833 + AT_rich Low_complexity Low_complexity 1 21 0 387 157 226 0 chr2 61701751 61701853 -191554730 - FRAM SINE Alu 0 166 42 186 339 0 0 chr2 61701991 61702053 -191554530 - MER5A DNA MER1_type 0 189 128 471 251 147 44 chr2 61702291 61702596 -191553987 + L1MC/D LINE L1 5329 5661 -469 1806 170 27 0 chr2 61702863 61703157 -191553426 + AluJb SINE Alu 1 302 -10 327 198 45 45 chr2 61706423 61706534 -191550049 + MIR SINE MIR 87 197 -65 1453 309 118 28 chr2 61706925 61708120 -191548463 + L2 LINE L2 1936 3289 -24 613 313 91 0 chr2 61708091 61708321 -191548262 + MIR SINE MIR 9 259 -3 * 24 32 0 0 chr2 61708411 61708442 -191548141 + AT_rich Low_complexity Low_complexity 1 31 0 1778 174 13 0 chr2 61708493 61708792 -191547791 + AluJo SINE Alu 1 303 -9 1813 139 0 21 chr2 61708876 61709163 -191547420 - AluSx SINE Alu -19 293 13 4691 252 85 40 chr2 61709413 61709908 -191546675 - L1MEc LINE L1 -1727 4488 4017 2498 180 4 42 chr2 61709908 61710019 -191546564 - MER66B LTR ERV1 0 486 372 1775 168 17 7 chr2 61710019 61710317 -191546266 - AluSx SINE Alu -11 301 1 2498 180 4 42 chr2 61710317 61710710 -191545873 - MER66B LTR ERV1 -114 372 1 4691 252 85 40 chr2 61710710 61712599 -191543984 - L1MEc LINE L1 -2198 4017 2044 946 311 60 67 chr2 61713045 61713750 -191542833 - L1MEc LINE L1 -5330 875 176 1036 232 0 81 chr2 61713756 61713858 -191542725 + AluJo SINE Alu 20 129 -183 1577 168 6 71 chr2 61713858 61714180 -191542403 - AluJb SINE Alu -8 304 4 1036 232 0 81 chr2 61714180 61714374 -191542209 + AluJo SINE Alu 129 292 -20 192 333 131 30 chr2 61715215 61715314 -191541269 - L3 LINE CR1 -1 1576 1468 333 68 0 0 chr2 61715586 61715630 -191540953 + (TG)n Simple_repeat Simple_repeat 1 44 0 1813 173 77 29 chr2 61718086 61718111 -191538472 - MLT2C2 LTR ERVL -8 456 434 414 0 0 0 chr2 61718111 61718157 -191538426 + (TG)n Simple_repeat Simple_repeat 2 47 0 1813 173 77 29 chr2 61718157 61718506 -191538077 - MLT2C2 LTR ERVL -30 434 64 412 21 0 0 chr2 61718690 61718738 -191537845 - MLT2C2 LTR ERVL -416 48 1 528 276 103 28 chr2 61719055 61719374 -191537209 - L1ME LINE L1 -464 5657 5315 414 208 8 52 chr2 61719414 61719679 -191536904 + (TA)n Simple_repeat Simple_repeat 1 253 0 226 246 0 16 chr2 61721067 61721128 -191535455 + MIR SINE MIR 203 262 0 1970 127 0 66 chr2 61721652 61721984 -191534599 - AluSq SINE Alu -1 312 3 260 337 0 12 chr2 61722430 61722513 -191534070 - MIR3 SINE MIR -36 172 91 4452 148 5 15 chr2 61723232 61723794 -191532789 - L1PA16 LINE L1 -1 6165 5610 2076 92 32 7 chr2 61723794 61724076 -191532507 + AluSc SINE Alu 1 289 -20 4452 148 5 15 chr2 61724076 61724268 -191532315 - L1PA16 LINE L1 -556 5610 5418 1264 199 132 20 chr2 61724849 61725205 -191531378 + MSTD LTR MaLR 1 396 0 641 205 82 157 chr2 61725340 61725696 -191530887 + MLT1D LTR MaLR 1 329 -297 853 193 11 11 chr2 61725702 61725878 -191530705 + FRAM SINE Alu 1 176 0 817 198 15 50 chr2 61725879 61726081 -191530502 + MLT1D LTR MaLR 310 504 -1 213 298 32 11 chr2 61726378 61726472 -191530111 + MIR SINE MIR 2 97 -165 * 234 250 0 0 chr2 61726452 61726504 -191530079 + MIR SINE MIR 211 262 0 316 280 119 47 chr2 61728078 61728314 -191528269 - L1M4 LINE L1 -2809 3337 3085 376 285 73 13 chr2 61728415 61728566 -191528017 - L1MC5 LINE L1 -48 7913 7754 26 0 0 0 chr2 61728578 61728604 -191527979 + AT_rich Low_complexity Low_complexity 1 26 0 181 252 0 36 chr2 61728634 61728745 -191527838 + (TATG)n Simple_repeat Simple_repeat 2 108 0 338 311 42 6 chr2 61729127 61729294 -191527289 - L1M4 LINE L1 -3646 2500 2328 30596 102 11 12 chr2 61729315 61735012 -191521571 + L1PA7 LINE L1 748 6455 -14 448 259 60 30 chr2 61741111 61741277 -191515306 - MIR SINE MIR -6 256 86 23 33 0 0 chr2 61744253 61744283 -191512300 + AT_rich Low_complexity Low_complexity 1 30 0 299 304 38 17 chr2 61744584 61744714 -191511869 + MIR SINE MIR 16 151 -71 922 289 221 26 chr2 61745299 61745797 -191510786 - MLT1G LTR MaLR 0 590 1 223 192 19 0 chr2 61746295 61746347 -191510236 + (TTCA)n Simple_repeat Simple_repeat 3 55 0 493 290 87 0 chr2 61746424 61746607 -191509976 - MIR SINE MIR 0 262 64 279 133 0 0 chr2 61747744 61747789 -191508794 + (A)n Simple_repeat Simple_repeat 1 45 0 353 273 78 23 chr2 61749036 61749164 -191507419 - MIR SINE MIR -108 154 20 741 296 175 2 chr2 61750376 61750781 -191505802 + L2 LINE L2 2831 3305 -8 217 354 58 9 chr2 61751601 61751743 -191504840 + MIR SINE MIR 45 189 -63 534 264 104 44 chr2 61752924 61753337 -191503246 - L1ME4a LINE L1 -31 6090 5653 180 289 96 0 chr2 61753541 61753593 -191502990 - L2 LINE L2 -60 3212 3156 566 249 88 18 chr2 61754003 61754220 -191502363 + MIR SINE MIR 31 262 0 685 122 0 0 chr2 61754652 61754750 -191501833 - Tigger7 DNA MER2_type 0 2487 2390 990 228 129 0 chr2 61754764 61754988 -191501595 - Tigger7 DNA MER2_type -2234 253 1 223 274 32 0 chr2 61755057 61755119 -191501464 + CT-rich Low_complexity Low_complexity 1 64 0 27 49 0 0 chr2 61755395 61755436 -191501147 + AT_rich Low_complexity Low_complexity 1 41 0 404 374 39 13 chr2 61755568 61755798 -191500785 - HAL1b LINE L1 -740 608 373 28 79 0 0 chr2 61758985 61759048 -191497535 + AT_rich Low_complexity Low_complexity 1 63 0 351 164 0 0 chr2 61759316 61759371 -191497212 + FLAM SINE Alu 71 125 -8 225 0 0 0 chr2 61760775 61760800 -191495783 + (T)n Simple_repeat Simple_repeat 1 25 0 218 299 75 0 chr2 61763836 61763903 -191492680 + L3 LINE CR1 1406 1477 -100 21 0 0 0 chr2 61765055 61765076 -191491507 + AT_rich Low_complexity Low_complexity 1 21 0 2942 108 36 0 chr2 61765339 61765784 -191490799 + L1PA11 LINE L1 5714 6174 0 222 191 0 0 chr2 61765844 61765891 -191490692 + (TATATG)n Simple_repeat Simple_repeat 5 51 0 1145 171 100 100 chr2 61765897 61766039 -191490544 + MLT1A1 LTR MaLR 13 154 -211 1913 121 3 3 chr2 61766039 61766321 -191490262 + AluY SINE Alu 1 282 -29 1145 171 100 100 chr2 61766321 61766529 -191490054 + MLT1A1 LTR MaLR 153 363 -2 246 263 0 0 chr2 61766529 61766587 -191489996 + (TG)n Simple_repeat Simple_repeat 1 58 0 25 0 0 0 chr2 61767500 61767525 -191489058 + AT_rich Low_complexity Low_complexity 1 25 0 246 323 42 0 chr2 61768533 61768629 -191487954 + MLT1J2 LTR MaLR 67 166 -284 204 273 0 0 chr2 61768663 61768729 -191487854 + CT-rich Low_complexity Low_complexity 2 67 0 304 197 49 0 chr2 61768873 61768934 -191487649 + MLT1I LTR MaLR 344 407 -2 876 249 38 8 chr2 61769203 61769440 -191487143 - MIR SINE MIR -11 251 8 339 336 0 41 chr2 61770051 61770197 -191486386 + MIR SINE MIR 11 150 -112 22 0 0 0 chr2 61771454 61771476 -191485107 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 61772256 61772277 -191484306 + AT_rich Low_complexity Low_complexity 1 21 0 206 324 65 28 chr2 61773685 61773793 -191482790 - L2 LINE L2 -8 3264 3153 227 265 29 0 chr2 61774110 61774178 -191482405 + MLT1J LTR MaLR 107 176 -335 225 261 0 0 chr2 61774273 61774319 -191482264 + MLT1J2 LTR MaLR 266 311 -139 466 154 0 29 chr2 61775298 61775402 -191481181 + CT-rich Low_complexity Low_complexity 4 104 0 1777 131 11 93 chr2 61776018 61776385 -191480198 + MER1B DNA MER1_type 1 337 0 533 304 48 5 chr2 61776535 61776742 -191479841 + LTR16C LTR ERVL 276 491 0 2284 110 0 0 chr2 61776808 61777116 -191479467 - AluSq SINE Alu 0 313 6 248 256 37 12 chr2 61778257 61778339 -191478244 + GA-rich Low_complexity Low_complexity 1 84 0 2186 122 0 0 chr2 61780043 61780339 -191476244 + AluSx SINE Alu 1 296 -16 2559 218 19 45 chr2 61780644 61781283 -191475300 - MLT1E3 LTR MaLR -2 622 1 2277 97 7 7 chr2 61781850 61782158 -191474425 + AluSx SINE Alu 1 308 -4 2081 131 3 0 chr2 61784402 61784693 -191471890 + AluSx SINE Alu 7 298 -14 34 24 0 0 chr2 61784723 61784764 -191471819 + AT_rich Low_complexity Low_complexity 1 41 0 258 32 0 0 chr2 61784903 61784934 -191471649 + (TG)n Simple_repeat Simple_repeat 2 32 0 235 215 75 21 chr2 61785391 61785484 -191471099 + L1ME4a LINE L1 6021 6118 -3 2228 136 11 22 chr2 61785728 61786096 -191470487 - THE1B LTR MaLR 0 364 1 251 335 114 0 chr2 61786727 61786903 -191469680 - L2 LINE L2 -833 2481 2286 498 209 0 0 chr2 61788107 61788236 -191468347 + (TA)n Simple_repeat Simple_repeat 2 130 0 384 211 0 56 chr2 61788411 61788501 -191468082 + MER33 DNA MER1_type 16 100 -224 625 207 36 0 chr2 61788552 61788663 -191467920 - FLAM_C SINE Alu -28 115 1 842 134 9 97 chr2 61788692 61788909 -191467674 + MER33 DNA MER1_type 127 324 0 31 26 0 0 chr2 61789489 61789527 -191467056 + AT_rich Low_complexity Low_complexity 1 38 0 26 0 0 0 chr2 61789772 61789798 -191466785 + AT_rich Low_complexity Low_complexity 1 26 0 181 208 0 57 chr2 61790848 61790901 -191465682 + L2 LINE L2 3264 3313 0 321 326 61 41 chr2 61791068 61791215 -191465368 - MIR3 SINE MIR -55 153 4 401 297 88 36 chr2 61791407 61791656 -191464927 - MIR SINE MIR 0 262 1 2533 112 6 11 chr2 61792054 61792419 -191464164 + THE1B LTR MaLR 2 364 0 10131 115 29 27 chr2 61792419 61793997 -191462586 + THE1B-int LTR MaLR 1 1580 0 2296 125 37 3 chr2 61793997 61794349 -191462234 + THE1B LTR MaLR 1 364 0 1731 164 51 0 chr2 61795119 61795393 -191461190 + AluSx SINE Alu 1 288 -24 780 298 12 0 chr2 61795948 61796206 -191460377 + MIR SINE MIR 2 262 0 847 215 43 48 chr2 61799009 61799195 -191457388 + MER5A DNA MER1_type 2 186 -3 632 187 65 16 chr2 61799349 61799472 -191457111 + Tigger5 DNA MER2_type 1 129 -2194 * 1818 135 126 20 chr2 61799466 61799748 -191456835 + Tigger5 DNA MER2_type 1930 2259 -64 2484 166 29 5 chr2 61799748 61800164 -191456419 - MSTB LTR MaLR 0 426 1 1818 135 126 20 chr2 61800164 61800237 -191456346 + Tigger5 DNA MER2_type 2259 2323 0 495 303 37 10 chr2 61800276 61800559 -191456024 - L2 LINE L2 -9 3304 2954 306 122 0 0 chr2 61801738 61801779 -191454804 + MER5A DNA MER1_type 29 69 -120 180 0 0 0 chr2 61806009 61806029 -191450554 + (TTG)n Simple_repeat Simple_repeat 2 21 0 483 18 0 0 chr2 61806167 61806223 -191450360 + (TG)n Simple_repeat Simple_repeat 2 57 0 23 33 0 0 chr2 61809405 61809435 -191447148 + AT_rich Low_complexity Low_complexity 1 30 0 24 32 0 0 chr2 61811895 61811926 -191444657 + AT_rich Low_complexity Low_complexity 1 31 0 207 114 0 0 chr2 61812195 61812230 -191444353 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 622 239 62 44 chr2 61813155 61813381 -191443202 + L2 LINE L2 3084 3313 0 525 286 57 11 chr2 61813702 61813877 -191442706 + MIR SINE MIR 9 191 -71 374 318 134 44 chr2 61814542 61815130 -191441453 + L1M4 LINE L1 4662 5302 -844 2340 99 3 0 chr2 61815529 61815832 -191440751 + AluSp SINE Alu 1 304 -9 22 0 0 0 chr2 61816138 61816160 -191440423 + AT_rich Low_complexity Low_complexity 1 22 0 734 298 119 24 chr2 61816360 61817031 -191439552 + HAL1b LINE L1 45 779 -569 518 268 163 0 chr2 61817035 61817188 -191439395 - MER5A DNA MER1_type -1 188 11 413 270 61 57 chr2 61817583 61817766 -191438817 + L1MDa LINE L1 2445 2626 -3914 942 171 17 104 chr2 61817766 61818006 -191438577 - MER20 DNA MER1_type 0 219 1 413 270 61 57 chr2 61818006 61818288 -191438295 + L1MDa LINE L1 2626 2913 -3627 256 274 29 10 chr2 61818677 61818779 -191437804 + L1MDa LINE L1 3353 3456 -3084 23 0 0 0 chr2 61818789 61818812 -191437771 + AT_rich Low_complexity Low_complexity 1 23 0 187 289 19 0 chr2 61819505 61819557 -191437026 + MER5B DNA MER1_type 126 178 0 1052 295 101 21 chr2 61819700 61820476 -191436107 + L1MDa LINE L1 4273 5110 -1430 21 36 0 0 chr2 61820539 61820567 -191436016 + AT_rich Low_complexity Low_complexity 1 28 0 331 221 58 29 chr2 61820901 61821005 -191435578 - MIR SINE MIR 0 262 156 233 277 15 15 chr2 61821369 61821434 -191435149 - L2 LINE L2 -4 3309 3245 598 265 56 46 chr2 61821676 61821872 -191434711 + MIR SINE MIR 64 261 -1 1995 104 57 0 chr2 61822573 61822853 -191433730 + AluSx SINE Alu 1 296 -16 1165 144 0 0 chr2 61822982 61823155 -191433428 + MER2 DNA MER2_type 1 173 -172 286 310 242 19 chr2 61823653 61824227 -191432356 + L2 LINE L2 1701 2402 -912 2201 108 6 10 chr2 61824439 61824753 -191431830 - AluSq SINE Alu 0 313 1 245 108 0 0 chr2 61825061 61825098 -191431485 + MADE1 DNA Mariner 2 38 -42 648 286 60 0 chr2 61825184 61825369 -191431214 - MIR SINE MIR -3 259 64 213 224 0 0 chr2 61825561 61825619 -191430964 + GA-rich Low_complexity Low_complexity 1 58 0 216 97 0 0 chr2 61826540 61826571 -191430012 + (A)n Simple_repeat Simple_repeat 1 31 0 2493 55 7 3 chr2 61826582 61826889 -191429694 + AluY SINE Alu 1 308 -3 44 46 0 0 chr2 61827303 61827368 -191429215 + AT_rich Low_complexity Low_complexity 1 65 0 389 238 146 13 chr2 61827630 61827781 -191428802 - MER113 DNA MER1_type? -344 177 7 583 261 0 8 chr2 61829290 61829420 -191427163 - FLAM_A SINE Alu -4 129 1 23 0 0 0 chr2 61830779 61830802 -191425781 + AT_rich Low_complexity Low_complexity 1 23 0 365 311 118 12 chr2 61830978 61831139 -191425444 - MIR3 SINE MIR -10 198 21 412 241 68 46 chr2 61832437 61832599 -191423984 - MIR3 SINE MIR -62 146 4 2827 3 0 0 chr2 61832788 61833091 -191423492 - AluYa5 SINE Alu -8 303 1 180 0 0 0 chr2 61833490 61833510 -191423073 + (ATG)n Simple_repeat Simple_repeat 3 22 0 444 276 41 14 chr2 61833579 61833724 -191422859 - MIR SINE MIR -78 184 36 283 205 248 51 chr2 61833863 61833980 -191422603 + MER91C DNA MER1_type 1 140 0 363 340 103 32 chr2 61835291 61835573 -191421010 + L2 LINE L2 2215 2516 -798 638 311 58 60 chr2 61835909 61836405 -191420178 - L1MEd LINE L1 -4867 1252 758 273 119 0 0 chr2 61837254 61837296 -191419287 + (TCTCCC)n Simple_repeat Simple_repeat 2 43 0 336 365 181 17 chr2 61837707 61838006 -191418577 + L2 LINE L2 2925 3272 0 1185 161 5 0 chr2 61838217 61838410 -191418173 + AluSg/x SINE Alu 114 307 -5 333 118 0 0 chr2 61839485 61839536 -191417047 + (TG)n Simple_repeat Simple_repeat 1 51 0 1681 161 109 0 chr2 61840512 61840816 -191415767 + MER1B DNA MER1_type 1 337 0 209 319 0 0 chr2 61842426 61842495 -191414088 + MIR SINE MIR 124 192 -70 418 319 118 9 chr2 61842587 61842816 -191413767 + MIR SINE MIR 9 262 0 203 156 0 0 chr2 61843075 61843107 -191413476 + (TCTA)n Simple_repeat Simple_repeat 1 32 0 1101 354 63 32 chr2 61844019 61844511 -191412072 + L3 LINE CR1 398 920 -657 2386 125 11 8 chr2 61844511 61844872 -191411711 - THE1B LTR MaLR 0 364 3 1101 354 63 32 chr2 61844872 61845094 -191411489 + L3 LINE CR1 920 1134 -443 246 309 103 21 chr2 61845234 61845331 -191411252 + L3b LINE CR1 1465 1569 -14 267 279 15 0 chr2 61846014 61846082 -191410501 + L2 LINE L2 3195 3263 -9 668 229 48 66 chr2 61846104 61846392 -191410191 + L1MC4a LINE L1 7528 7986 -9 699 209 6 43 chr2 61847454 61847617 -191408966 - MER5A DNA MER1_type -31 158 2 1025 254 5 9 chr2 61847626 61847850 -191408733 + MER58A DNA MER1_type 1 223 -1 258 264 120 66 chr2 61848596 61848763 -191407820 + L2 LINE L2 2949 3124 -148 245 369 83 78 chr2 61849920 61850354 -191406229 - L2 LINE L2 0 3272 2837 576 288 67 54 chr2 61850768 61851140 -191405443 + MLT1I LTR MaLR 4 380 -29 272 182 36 82 chr2 61851142 61851252 -191405331 - MER69 DNA AcHobo 0 2526 2422 * 746 189 21 0 chr2 61851219 61851362 -191405221 - MER69 DNA AcHobo -2379 147 2 192 391 118 0 chr2 61851729 61851839 -191404744 - L2 LINE L2 0 3272 3150 21 36 0 0 chr2 61856600 61856628 -191399955 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 61856790 61856814 -191399769 + AT_rich Low_complexity Low_complexity 1 24 0 253 245 0 0 chr2 61858296 61858349 -191398234 + MIR SINE MIR 54 106 -156 221 262 33 16 chr2 61858491 61858552 -191398031 + L2 LINE L2 3251 3312 -1 260 130 37 0 chr2 61858970 61859024 -191397559 + (TATG)n Simple_repeat Simple_repeat 1 56 0 2089 128 20 0 chr2 61859174 61859470 -191397113 - AluSx SINE Alu -10 302 1 382 285 101 0 chr2 61859533 61859691 -191396892 - L1ME LINE L1 -455 5666 5493 28 0 0 0 chr2 61862193 61862221 -191394362 + AT_rich Low_complexity Low_complexity 1 28 0 5507 125 48 18 chr2 61862221 61862851 -191393732 - L1MA3 LINE L1 -1 7723 7053 3893 168 52 64 chr2 61862851 61863817 -191392766 + LTR13 LTR ERVK 1 954 0 5507 125 48 18 chr2 61863817 61864145 -191392438 - L1MA3 LINE L1 -671 7053 6736 26 0 0 0 chr2 61864339 61864365 -191392218 + AT_rich Low_complexity Low_complexity 1 26 0 7496 25 1 0 chr2 61864365 61865841 -191390742 - L1PA3 LINE L1 -3 6152 4696 15116 180 18 14 chr2 61865841 61867489 -191389094 - L1MA3 LINE L1 -814 6751 5112 2176 103 3 3 chr2 61867489 61867781 -191388802 - AluY SINE Alu -19 292 1 15116 180 18 14 chr2 61867781 61869765 -191386818 - L1MA3 LINE L1 -2453 5112 3100 13666 175 41 13 chr2 61869762 61872386 -191384197 - L1MA3 LINE L1 -4856 2709 12 * 21 0 0 0 chr2 61872985 61873006 -191383577 + AT_rich Low_complexity Low_complexity 1 21 0 28 48 0 0 chr2 61873702 61873744 -191382839 + AT_rich Low_complexity Low_complexity 1 42 0 462 239 22 22 chr2 61873926 61874060 -191382523 - MLT1J LTR MaLR 0 511 378 310 246 123 8 chr2 61874229 61874351 -191382232 - MLT1J LTR MaLR -369 142 7 283 286 72 17 chr2 61877296 61877501 -191379082 + MLT1H1 LTR MaLR 322 518 -37 450 228 117 41 chr2 61877788 61877933 -191378650 + MIR SINE MIR 105 260 -2 744 85 8 23 chr2 61878521 61878650 -191377933 + (TTCC)n Simple_repeat Simple_repeat 2 128 0 454 326 86 4 chr2 61878855 61879088 -191377495 + MIR SINE MIR 2 253 -9 347 311 26 84 chr2 61879391 61879464 -191377119 - MIR3 SINE MIR -10 198 122 1414 154 50 38 chr2 61879464 61879783 -191376800 + MER33 DNA MER1_type 2 324 0 347 311 26 84 chr2 61879783 61879899 -191376684 - MIR3 SINE MIR -86 122 20 320 314 36 14 chr2 61880813 61880953 -191375630 - MIR3 SINE MIR -3 205 63 704 282 39 13 chr2 61881723 61881957 -191374626 + MIR SINE MIR 10 249 -13 440 328 41 20 chr2 61882465 61882660 -191373923 + MIR SINE MIR 64 262 0 219 69 0 0 chr2 61884830 61884859 -191371724 + (TC)n Simple_repeat Simple_repeat 1 29 0 458 225 21 56 chr2 61885351 61885493 -191371090 + MIR SINE MIR 80 216 -46 207 278 28 0 chr2 61886517 61886589 -191369994 + MIR SINE MIR 145 218 -44 261 281 0 0 chr2 61886827 61886884 -191369699 - L2 LINE L2 -5 3308 3252 486 240 169 13 chr2 61887610 61887764 -191368819 + MER5A DNA MER1_type 1 178 -11 316 226 12 48 chr2 61887818 61887902 -191368681 - MIR3 SINE MIR -115 93 13 2004 164 0 0 chr2 61889311 61889609 -191366974 + AluSx SINE Alu 1 298 -14 189 171 0 0 chr2 61889884 61889919 -191366664 + A-rich Low_complexity Low_complexity 1 35 0 222 62 0 0 chr2 61891113 61891145 -191365438 + (A)n Simple_repeat Simple_repeat 1 32 0 183 80 0 0 chr2 61891552 61891577 -191365006 + (CATATA)n Simple_repeat Simple_repeat 3 27 0 212 326 82 15 chr2 61892456 61892591 -191363992 + MIR SINE MIR 87 230 -32 338 232 0 53 chr2 61892654 61892749 -191363834 + MIR3 SINE MIR 111 200 -8 402 312 49 4 chr2 61894295 61894490 -191362093 - MIR SINE MIR -50 212 8 214 188 0 29 chr2 61897521 61897590 -191358993 + GA-rich Low_complexity Low_complexity 2 68 0 1923 163 0 22 chr2 61897843 61898162 -191358421 - AluJo SINE Alu 0 312 1 26 0 0 0 chr2 61898496 61898522 -191358061 + AT_rich Low_complexity Low_complexity 1 26 0 237 260 14 0 chr2 61898531 61898604 -191357979 + L1 LINE L1 2945 3018 -3128 247 110 55 27 chr2 61898778 61898875 -191357708 + (TA)n Simple_repeat Simple_repeat 1 99 0 385 290 117 78 chr2 61898915 61899429 -191357154 + L1 LINE L1 3225 3758 -2388 183 186 0 0 chr2 61899937 61899980 -191356603 + CT-rich Low_complexity Low_complexity 2 44 0 352 282 38 80 chr2 61900708 61900921 -191355662 + MIR SINE MIR 9 212 -50 352 260 76 41 chr2 61902666 61902876 -191353707 - MLT1J1 LTR MaLR -129 317 119 645 289 29 10 chr2 61903031 61903235 -191353348 + MIR SINE MIR 48 255 -7 870 263 17 0 chr2 61903471 61903711 -191352872 + LTR16B LTR ERVL 221 464 0 250 291 82 60 chr2 61904085 61904219 -191352364 - L2 LINE L2 -40 3232 3096 2046 157 38 33 chr2 61904222 61904770 -191351813 - MLT2A2 LTR ERVL 0 554 1 199 355 0 11 chr2 61904770 61904863 -191351720 - L2 LINE L2 -224 3048 2957 206 253 25 8 chr2 61905425 61905499 -191351084 + CT-rich Low_complexity Low_complexity 3 125 0 201 274 0 0 chr2 61907721 61907772 -191348811 - MIR3 SINE MIR -49 159 109 1752 175 33 29 chr2 61907777 61908350 -191348233 + MER39 LTR ERV1 6 707 0 2119 144 11 8 chr2 61909285 61909639 -191346944 + THE1A LTR MaLR 1 355 0 457 265 38 45 chr2 61910103 61910235 -191346348 - L2 LINE L2 0 3272 3142 1204 262 89 15 chr2 61910993 61911386 -191345197 - MLT1J2 LTR MaLR -14 436 15 1008 217 14 23 chr2 61911703 61911924 -191344659 - MER20 DNA MER1_type 0 219 1 258 32 0 0 chr2 61912647 61912678 -191343905 + (CA)n Simple_repeat Simple_repeat 2 32 0 472 329 61 6 chr2 61913800 61913964 -191342619 - MIR3 SINE MIR -15 193 21 460 300 46 27 chr2 61914809 61915005 -191341578 + MIR3 SINE MIR 3 202 -6 486 0 0 0 chr2 61916418 61916472 -191340111 + (TG)n Simple_repeat Simple_repeat 1 54 0 204 125 0 0 chr2 61916873 61916905 -191339678 + (CAA)n Simple_repeat Simple_repeat 1 32 0 407 274 42 19 chr2 61918115 61918290 -191338293 - MIR SINE MIR -35 227 49 181 374 61 26 chr2 61918859 61918974 -191337609 - L2 LINE L2 -15 3257 3139 307 282 48 65 chr2 61919107 61919231 -191337352 - MIR SINE MIR -21 241 120 27 49 0 0 chr2 61919687 61919728 -191336855 + AT_rich Low_complexity Low_complexity 1 41 0 408 20 0 0 chr2 61920894 61920973 -191335610 + (TC)n Simple_repeat Simple_repeat 1 79 -319 2009 111 4 0 chr2 61920973 61921243 -191335340 + AluSg SINE Alu 1 271 -39 408 20 0 0 chr2 61921243 61921292 -191335291 + (TC)n Simple_repeat Simple_repeat 1 49 0 252 0 0 0 chr2 61921291 61921319 -191335264 + (CA)n Simple_repeat Simple_repeat 1 28 0 25 0 0 0 chr2 61921870 61921895 -191334688 + AT_rich Low_complexity Low_complexity 1 25 0 3586 65 0 0 chr2 61922818 61923280 -191333303 + L1PA8 LINE L1 5709 6170 -2 248 361 10 10 chr2 61923591 61923688 -191332895 + L2 LINE L2 3200 3296 -17 227 255 122 10 chr2 61925987 61926085 -191330498 + MIR SINE MIR 30 138 -70 612 236 0 0 chr2 61927824 61927934 -191328649 + MER81 DNA DNA 4 113 -1 390 232 102 28 chr2 61929116 61929293 -191327290 + MLT1L LTR MaLR 90 279 -336 259 224 0 17 chr2 61929899 61929957 -191326626 - MIR SINE MIR -1 261 205 1362 191 48 30 chr2 61930141 61930480 -191326103 - L1MC3 LINE L1 0 7785 5985 192 374 30 0 chr2 61930520 61930619 -191325964 + L2 LINE L2 1804 1905 -1409 184 370 99 47 chr2 61930663 61930790 -191325793 + L2 LINE L2 2394 2513 -801 4234 42 0 4 chr2 61930790 61931310 -191325273 - L1PA8 LINE L1 -2 6170 5653 184 370 99 47 chr2 61931310 61931736 -191324847 + L2 LINE L2 2513 2976 -338 362 261 22 52 chr2 61932053 61932187 -191324396 - L2 LINE L2 -4 3309 3180 1974 129 0 48 chr2 61933314 61933648 -191322935 - AluSx SINE Alu 0 319 1 193 347 13 0 chr2 61933744 61933819 -191322764 - L2 LINE L2 -93 3179 3104 776 68 0 8 chr2 61935607 61935725 -191320858 - LTR9B LTR ERV1 -83 561 445 563 235 28 138 chr2 61936391 61936608 -191319975 + MER91A DNA MER1_type 4 196 0 597 261 109 84 chr2 61937133 61937608 -191318975 + Charlie8 DNA MER1_type 1 487 -1930 186 302 81 0 chr2 61937736 61937822 -191318761 - L3 LINE CR1 -194 1383 1291 482 296 55 75 chr2 61937844 61938243 -191318340 + MLT1I LTR MaLR 19 409 0 22 70 0 0 chr2 61938986 61939029 -191317554 + AT_rich Low_complexity Low_complexity 1 43 0 187 292 250 0 chr2 61939368 61939440 -191317143 + MIR SINE MIR 52 141 -67 215 208 0 21 chr2 61942054 61942102 -191314481 - L2 LINE L2 -20 3252 3206 203 265 20 0 chr2 61942105 61942154 -191314429 + (ATG)n Simple_repeat Simple_repeat 2 51 0 405 328 36 1 chr2 61942219 61942347 -191314236 - MIR SINE MIR -62 146 23 200 139 0 23 chr2 61942408 61942451 -191314132 + (TAA)n Simple_repeat Simple_repeat 3 44 0 206 308 138 23 chr2 61942725 61942855 -191313728 - MIR SINE MIR -65 197 53 312 294 136 60 chr2 61943011 61943195 -191313388 - MIR SINE MIR -6 256 59 393 271 24 71 chr2 61943431 61943601 -191312982 - MIR SINE MIR -73 189 28 250 373 164 8 chr2 61943941 61944075 -191312508 + MER91A DNA MER1_type 1 155 -41 180 77 0 0 chr2 61944328 61944354 -191312229 + (TTTTTG)n Simple_repeat Simple_repeat 3 28 0 26 74 0 0 chr2 61944820 61944874 -191311709 + AT_rich Low_complexity Low_complexity 1 54 0 748 269 22 56 chr2 61944921 61945244 -191311339 + L2 LINE L2 2979 3290 -23 589 65 11 11 chr2 61949331 61949423 -191307160 + (TG)n Simple_repeat Simple_repeat 1 92 0 194 191 48 63 chr2 61949801 61949864 -191306719 - L2 LINE L2 0 3313 3252 414 0 0 0 chr2 61952230 61952276 -191304307 + (TG)n Simple_repeat Simple_repeat 2 47 0 207 69 0 0 chr2 61953457 61953486 -191303097 + (TC)n Simple_repeat Simple_repeat 1 29 0 187 234 8 32 chr2 61953879 61954003 -191302580 + CT-rich Low_complexity Low_complexity 1 121 0 30 0 0 0 chr2 61955017 61955047 -191301536 + AT_rich Low_complexity Low_complexity 1 30 0 342 338 123 0 chr2 61956710 61956864 -191299719 + MIR3 SINE MIR 30 202 -6 21 36 0 0 chr2 61957934 61957962 -191298621 + AT_rich Low_complexity Low_complexity 1 28 0 275 250 62 0 chr2 61960118 61960182 -191296401 + L2 LINE L2 3185 3252 -20 657 211 34 20 chr2 61960199 61960346 -191296237 - L2 LINE L2 0 3313 3165 319 216 0 0 chr2 61960353 61960427 -191296156 + MER116 DNA Mariner 7 80 0 2158 73 45 18 chr2 61961283 61961569 -191295014 - AluY SINE Alu -17 294 1 31 58 0 0 chr2 61961697 61961749 -191294834 + AT_rich Low_complexity Low_complexity 1 52 0 497 273 43 0 chr2 61962092 61962231 -191294352 - MIR SINE MIR -111 151 7 461 298 107 19 chr2 61963702 61963917 -191292666 - MIR SINE MIR -16 246 13 318 277 122 20 chr2 61964951 61965099 -191291484 - MIR3 SINE MIR -14 194 32 2094 146 6 40 chr2 61967279 61967628 -191288955 - MER1B DNA MER1_type 0 337 1 1366 252 70 9 chr2 61971065 61971494 -191285089 + LTR16B LTR ERVL 2 456 -8 282 269 176 22 chr2 61971512 61971694 -191284889 - MIR SINE MIR 0 262 53 301 281 35 44 chr2 61972552 61972666 -191283917 + MIR SINE MIR 67 179 -83 221 347 99 25 chr2 61973874 61973995 -191282588 - L2 LINE L2 0 3313 3184 973 198 22 36 chr2 61974792 61975014 -191281569 - MER20 DNA MER1_type 0 219 1 208 139 28 0 chr2 61976496 61976532 -191280051 + CT-rich Low_complexity Low_complexity 2 38 0 1438 184 38 51 chr2 61977797 61978167 -191278416 - MLT1A1 LTR MaLR 0 365 1 877 222 6 0 chr2 61978795 61978962 -191277621 - FRAM SINE Alu -12 164 1 289 258 15 15 chr2 61979013 61979079 -191277504 + L2 LINE L2 2562 2627 -687 1673 191 92 32 chr2 61979087 61979553 -191277030 + MLT1D LTR MaLR 12 505 0 192 362 55 43 chr2 61979562 61979819 -191276764 + L2 LINE L2 2626 2885 -429 929 255 16 29 chr2 61980064 61980307 -191276276 - MIR SINE MIR -19 243 4 2511 255 45 57 chr2 61980484 61981547 -191275036 - L1MEc LINE L1 -2391 3824 2749 614 156 0 0 chr2 61981547 61981637 -191274946 - AluJb SINE Alu -24 288 199 2511 255 45 57 chr2 61981637 61982145 -191274438 - L1MEc LINE L1 -3466 2749 2236 2150 155 3 21 chr2 61982145 61982525 -191274058 + THE1C LTR MaLR 1 373 -2 10124 116 45 5 chr2 61982527 61984045 -191272538 + THE1C-int LTR MaLR 1 1580 0 1981 161 21 16 chr2 61984045 61984418 -191272165 + THE1C LTR MaLR 1 375 0 2511 255 45 57 chr2 61984418 61984542 -191272041 - L1MEc LINE L1 -3978 2237 2151 1467 146 146 26 chr2 61984550 61984858 -191271725 - MSTA LTR MaLR 0 428 84 3231 248 80 39 chr2 61984889 61985369 -191271214 - L1MEc LINE L1 -4748 1648 1189 1547 198 9 31 chr2 61985369 61985688 -191270895 - AluJo SINE Alu 0 312 1 3231 248 80 39 chr2 61985688 61986750 -191269833 - L1MEc LINE L1 -5207 1189 42 2241 113 0 31 chr2 61988554 61988874 -191267709 - AluSx SINE Alu 0 312 3 225 0 0 0 chr2 61989578 61989603 -191266980 + (TG)n Simple_repeat Simple_repeat 1 25 0 23 68 0 0 chr2 61990820 61990864 -191265719 + AT_rich Low_complexity Low_complexity 1 44 0 204 143 0 0 chr2 61993374 61993416 -191263167 + (T)n Simple_repeat Simple_repeat 1 42 0 197 300 40 30 chr2 61993994 61994094 -191262489 - MIR3 SINE MIR -4 204 104 243 0 0 0 chr2 61995089 61995116 -191261467 + (T)n Simple_repeat Simple_repeat 1 27 0 246 252 252 9 chr2 61997208 61997319 -191259264 + MIR SINE MIR 55 192 -70 189 0 0 0 chr2 61998828 61998849 -191257734 + (CA)n Simple_repeat Simple_repeat 2 22 0 272 194 10 29 chr2 61999369 61999472 -191257111 + CT-rich Low_complexity Low_complexity 2 102 0 188 122 24 0 chr2 61999971 62000012 -191256571 + CT-rich Low_complexity Low_complexity 2 43 0 284 0 28 0 chr2 62000014 62000050 -191256533 + (CA)n Simple_repeat Simple_repeat 1 37 0 209 289 211 0 chr2 62001430 62001520 -191255063 - MIR SINE MIR -65 143 35 2369 154 59 49 chr2 62001666 62002068 -191254515 + L1MA9 LINE L1 4872 5268 -1044 1727 166 0 14 chr2 62002068 62002358 -191254225 - AluJo SINE Alu -26 286 1 2369 154 59 49 chr2 62002358 62002504 -191254079 + L1MA9 LINE L1 5268 5411 -901 2295 93 0 3 chr2 62002504 62002795 -191253788 + AluSc SINE Alu 1 290 -19 2369 154 59 49 chr2 62002795 62003149 -191253434 + L1MA9 LINE L1 5411 5780 -532 1076 124 6 0 chr2 62003182 62003351 -191253232 + L1MA9 LINE L1 6143 6312 0 2372 96 3 3 chr2 62003422 62003734 -191252849 - AluSp SINE Alu -1 312 1 329 303 0 0 chr2 62003734 62003833 -191252750 + MIR SINE MIR 114 212 -50 22 0 0 0 chr2 62004439 62004461 -191252122 + AT_rich Low_complexity Low_complexity 1 22 0 372 264 94 66 chr2 62004843 62005055 -191251528 + MIR SINE MIR 9 226 -36 186 356 96 17 chr2 62005152 62005267 -191251316 + L2 LINE L2 3141 3264 -8 280 283 176 44 chr2 62005395 62005600 -191250983 - L3 LINE CR1 -974 603 372 230 336 106 60 chr2 62005692 62005975 -191250608 - L3 LINE CR1 -1252 325 30 814 266 107 3 chr2 62007012 62007301 -191249282 + MER5C DNA MER1_type 5 323 -1 2262 100 3 0 chr2 62007395 62007694 -191248889 - AluSp SINE Alu -13 300 1 24 53 0 0 chr2 62009724 62009762 -191246821 + AT_rich Low_complexity Low_complexity 1 38 0 2344 107 7 0 chr2 62010048 62010358 -191246225 - AluSp SINE Alu -1 312 1 217 178 0 22 chr2 62010402 62010447 -191246136 + (TATATG)n Simple_repeat Simple_repeat 2 45 0 330 146 11 22 chr2 62013527 62013616 -191242967 + GA-rich Low_complexity Low_complexity 3 90 0 183 42 0 0 chr2 62014061 62014085 -191242498 + (T)n Simple_repeat Simple_repeat 1 24 0 216 0 0 0 chr2 62014845 62014869 -191241714 + (TTAAA)n Simple_repeat Simple_repeat 2 25 0 295 231 10 19 chr2 62016757 62016861 -191239722 + CT-rich Low_complexity Low_complexity 3 105 0 198 71 0 0 chr2 62018440 62018468 -191238115 + (TG)n Simple_repeat Simple_repeat 1 28 0 261 0 0 0 chr2 62019208 62019237 -191237346 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 22 0 0 0 chr2 62019908 62019930 -191236653 + AT_rich Low_complexity Low_complexity 1 22 0 203 79 26 0 chr2 62020534 62020572 -191236011 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 22 0 0 0 chr2 62021981 62022003 -191234580 + AT_rich Low_complexity Low_complexity 1 22 0 180 200 0 0 chr2 62022191 62022231 -191234352 + (TA)n Simple_repeat Simple_repeat 1 40 0 555 264 193 5 chr2 62022322 62022519 -191234064 + LTR33 LTR ERVL 6 239 -282 231 306 163 20 chr2 62022548 62022646 -191233937 - L2 LINE L2 -2 3311 3200 2232 116 0 0 chr2 62022731 62023034 -191233549 - AluY SINE Alu -8 303 1 25 51 0 0 chr2 62023840 62023879 -191232704 + AT_rich Low_complexity Low_complexity 1 39 0 219 36 0 0 chr2 62024168 62024196 -191232387 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 515 205 39 16 chr2 62024527 62024654 -191231929 - MER69 DNA AcHobo -3 2523 2394 228 349 0 0 chr2 62024653 62024719 -191231864 - MER69 DNA AcHobo -1148 78 13 * 410 304 0 0 chr2 62025086 62025201 -191231382 - MIR SINE MIR -64 144 30 929 303 95 48 chr2 62025620 62027035 -191229548 + L1MEd LINE L1 144 1615 -4600 245 266 106 9 chr2 62027307 62027525 -191229058 + L1MEd LINE L1 2058 2296 -4100 394 290 52 83 chr2 62027526 62027874 -191228709 + L1MEd LINE L1 2308 2644 -3571 1738 195 0 10 chr2 62027900 62028202 -191228381 + AluJb SINE Alu 3 301 -11 406 271 25 0 chr2 62028568 62028690 -191227893 - L1MC5 LINE L1 -521 7440 7316 685 194 14 28 chr2 62028847 62028991 -191227592 + FLAM_A SINE Alu 1 142 0 275 151 19 0 chr2 62029032 62029085 -191227498 - L1MC5 LINE L1 -737 7224 7171 513 249 56 86 chr2 62029387 62029781 -191226802 + L1MEd LINE L1 3861 4242 -1973 479 236 62 107 chr2 62029812 62030009 -191226574 + MIR SINE MIR 34 221 -41 1337 132 24 5 chr2 62030009 62030222 -191226361 + L1PA11 LINE L1 5957 6173 -1 479 236 62 107 chr2 62030222 62030249 -191226334 + MIR SINE MIR 221 248 -14 442 260 73 18 chr2 62030331 62030705 -191225878 + L1MEd LINE L1 4250 4650 -1565 454 298 152 47 chr2 62030799 62031181 -191225402 + MLT1G1 LTR MaLR 112 533 -9 308 262 32 0 chr2 62031264 62031390 -191225193 + L1MEd LINE L1 4760 4889 -1326 26 0 0 0 chr2 62031666 62031692 -191224891 + AT_rich Low_complexity Low_complexity 1 26 0 3745 77 63 0 chr2 62031718 62032239 -191224344 - MER41A LTR ERV1 0 554 1 1244 183 93 35 chr2 62034106 62034266 -191222317 - AluJo SINE Alu -3 309 160 1894 113 60 0 chr2 62034266 62034549 -191222034 - AluY SINE Alu -9 302 3 1244 183 93 35 chr2 62034549 62034678 -191221905 - AluJo SINE Alu -152 160 3 215 282 14 28 chr2 62035304 62035375 -191221208 + MIR SINE MIR 137 206 -56 780 280 111 42 chr2 62035592 62036275 -191220308 + HAL1b LINE L1 77 806 -542 307 106 21 0 chr2 62036490 62036537 -191220046 + MADE1 DNA Mariner 3 50 -30 224 128 0 43 chr2 62036611 62036658 -191219925 + (TATATG)n Simple_repeat Simple_repeat 4 48 0 1188 221 139 54 chr2 62036662 62037123 -191219460 + MLT1D LTR MaLR 1 500 -5 21 0 0 0 chr2 62037253 62037274 -191219309 + AT_rich Low_complexity Low_complexity 1 21 0 252 264 0 28 chr2 62037312 62037384 -191219199 - MER103 DNA DNA -86 80 11 273 75 0 0 chr2 62037614 62037654 -191218929 + (GA)n Simple_repeat Simple_repeat 1 40 0 1474 156 63 63 chr2 62038099 62038400 -191218183 + AluJb SINE Alu 1 301 -11 239 255 0 0 chr2 62038729 62038780 -191217803 + CT-rich Low_complexity Low_complexity 2 52 0 21 36 0 0 chr2 62038869 62038897 -191217686 + AT_rich Low_complexity Low_complexity 1 28 0 2076 118 55 22 chr2 62039081 62039444 -191217139 + THE1C LTR MaLR 1 375 0 220 346 74 66 chr2 62040361 62040604 -191215979 + MIR SINE MIR 12 256 -6 363 337 63 6 chr2 62040794 62040969 -191215614 - MIR SINE MIR -10 252 68 2300 121 11 30 chr2 62041925 62042296 -191214287 - THE1B LTR MaLR 0 364 1 1436 149 0 5 chr2 62042327 62042549 -191214034 - AluJb SINE Alu -6 306 86 1052 251 5 0 chr2 62043298 62043517 -191213066 - MER58A DNA MER1_type -3 221 2 566 250 0 8 chr2 62043520 62043644 -191212939 + L2 LINE L2 3191 3313 0 237 33 0 0 chr2 62047074 62047104 -191209479 + (CA)n Simple_repeat Simple_repeat 2 31 0 22 0 0 0 chr2 62047665 62047687 -191208896 + AT_rich Low_complexity Low_complexity 1 22 0 556 263 42 72 chr2 62048523 62048854 -191207729 + MLT1G1 LTR MaLR 1 284 -271 404 244 99 52 chr2 62048847 62049019 -191207564 + MLT1G1 LTR MaLR 411 590 0 * 1586 235 80 24 chr2 62049147 62049658 -191206925 - L1ME2 LINE L1 0 6164 5625 377 341 0 7 chr2 62049658 62049793 -191206790 - L1MEc LINE L1 -6137 259 126 228 244 13 39 chr2 62049800 62049878 -191206705 + (TATATG)n Simple_repeat Simple_repeat 3 78 0 308 152 91 0 chr2 62049878 62049944 -191206639 - L1MEc LINE L1 -6274 122 51 614 265 11 108 chr2 62050058 62050337 -191206246 + MIR SINE MIR 11 262 0 200 194 0 0 chr2 62050868 62050904 -191205679 + (TG)n Simple_repeat Simple_repeat 1 36 0 470 361 57 47 chr2 62051247 62051546 -191205037 + MER115 DNA AcHobo 1 302 -391 1009 289 54 3 chr2 62051579 62051877 -191204706 + MER115 DNA AcHobo 373 685 -8 1041 187 0 0 chr2 62052289 62052455 -191204128 + AluJb SINE Alu 131 296 -16 279 325 93 21 chr2 62052665 62052859 -191203724 + MIR SINE MIR 7 214 -48 2364 187 17 118 chr2 62055481 62056182 -191200401 - LTR27 LTR ERV1 0 636 7 186 248 10 20 chr2 62057727 62057828 -191198755 + GA-rich Low_complexity Low_complexity 2 101 0 286 183 0 5 chr2 62058062 62058126 -191198457 + Alu SINE Alu 1 44 -255 1940 134 0 0 chr2 62058126 62058401 -191198182 + AluSx SINE Alu 1 275 -37 220 263 18 0 chr2 62059910 62059967 -191196616 + (TA)n Simple_repeat Simple_repeat 2 59 0 2125 125 6 6 chr2 62060622 62060951 -191195632 - AluSx SINE Alu 0 329 1 31 58 0 0 chr2 62061329 62061381 -191195202 + AT_rich Low_complexity Low_complexity 1 52 0 2346 94 3 0 chr2 62061461 62061769 -191194814 - AluSc SINE Alu 0 309 1 210 37 0 0 chr2 62062973 62063000 -191193583 + (TG)n Simple_repeat Simple_repeat 2 28 0 793 262 18 16 chr2 62063210 62063453 -191193130 - MIR SINE MIR -1 261 17 24 32 0 0 chr2 62064411 62064442 -191192141 + AT_rich Low_complexity Low_complexity 1 31 0 430 252 168 19 chr2 62064969 62065124 -191191459 - MER5A DNA MER1_type 0 189 12 21 0 0 0 chr2 62066192 62066213 -191190370 + AT_rich Low_complexity Low_complexity 1 21 0 405 0 0 0 chr2 62067161 62067206 -191189377 + (TG)n Simple_repeat Simple_repeat 1 45 0 27 0 0 0 chr2 62068073 62068100 -191188483 + AT_rich Low_complexity Low_complexity 1 27 0 23 33 0 0 chr2 62068848 62068878 -191187705 + AT_rich Low_complexity Low_complexity 1 30 0 271 291 117 0 chr2 62070011 62070114 -191186469 + MIR SINE MIR 77 191 -71 916 164 13 0 chr2 62071081 62071240 -191185343 + FRAM SINE Alu 1 160 -16 364 259 82 38 chr2 62071554 62071712 -191184871 + MIR SINE MIR 98 262 0 986 291 4 8 chr2 62073278 62073539 -191183044 - MIR SINE MIR 0 262 3 27 49 0 0 chr2 62074352 62074393 -191182190 + AT_rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr2 62076055 62076077 -191180506 + AT_rich Low_complexity Low_complexity 1 22 0 362 204 65 37 chr2 62076665 62076773 -191179810 - MIR SINE MIR -44 218 108 180 0 0 0 chr2 62076800 62076820 -191179763 + (T)n Simple_repeat Simple_repeat 1 20 0 2341 100 10 0 chr2 62076844 62077144 -191179439 - AluSg SINE Alu -7 303 1 21 57 0 0 chr2 62077575 62077610 -191178973 + AT_rich Low_complexity Low_complexity 1 35 0 5534 149 32 7 chr2 62077832 62079660 -191176923 + L1MA4 LINE L1 4425 6298 -2 1983 130 7 3 chr2 62079752 62080070 -191176513 + AluSq SINE Alu 1 313 0 213 326 12 47 chr2 62080970 62081056 -191175527 + L2 LINE L2 3185 3267 -5 472 119 158 0 chr2 62081402 62081503 -191175080 + LTR9B LTR ERV1 445 561 -83 266 73 24 0 chr2 62081503 62081544 -191175039 + (GAAAA)n Simple_repeat Simple_repeat 2 43 0 198 231 218 13 chr2 62081567 62081645 -191174938 - L2 LINE L2 -4 3268 3175 1272 172 0 41 chr2 62082026 62082275 -191174308 - AluJb SINE Alu 0 312 73 180 256 49 24 chr2 62082298 62082380 -191174203 - L2 LINE L2 -112 3201 3118 2830 19 0 0 chr2 62082603 62082918 -191173665 + AluYb8 SINE Alu 1 315 -3 2086 124 3 3 chr2 62083937 62084236 -191172347 - AluSx SINE Alu -9 303 5 226 231 0 0 chr2 62085045 62085097 -191171486 - MLT1I LTR MaLR -273 136 85 282 345 172 0 chr2 62085311 62085456 -191171127 - L2 LINE L2 -346 2968 2799 21 0 0 0 chr2 62087378 62087399 -191169184 + AT_rich Low_complexity Low_complexity 1 21 0 230 313 61 30 chr2 62089182 62089313 -191167270 + L2 LINE L2 3175 3309 -4 253 136 0 34 chr2 62089414 62089473 -191167110 + (CAA)n Simple_repeat Simple_repeat 1 57 0 185 327 18 0 chr2 62089499 62089554 -191167029 + L2 LINE L2 3250 3305 -8 2786 135 34 13 chr2 62090209 62090734 -191165849 - L1MA9 LINE L1 0 6312 5777 300 154 0 0 chr2 62090743 62090795 -191165788 + (TA)n Simple_repeat Simple_repeat 2 53 0 320 221 15 15 chr2 62090852 62090983 -191165600 + (TA)n Simple_repeat Simple_repeat 1 131 0 317 186 12 58 chr2 62090985 62091071 -191165512 - L1MA9 LINE L1 -522 5790 5709 27 0 0 0 chr2 62091206 62091233 -191165350 + AT_rich Low_complexity Low_complexity 1 27 0 1673 160 0 56 chr2 62091234 62091540 -191165043 - AluJo SINE Alu -23 289 1 1160 181 19 162 chr2 62091617 62092037 -191164546 - MLT1A1 LTR MaLR -2 363 4 1835 229 35 0 chr2 62092043 62092467 -191164116 - MLT1A1-int LTR MaLR -3 1732 1294 285 260 0 42 chr2 62092578 62092674 -191163909 - MLT1A1-int LTR MaLR -964 771 680 255 246 0 0 chr2 62092732 62092793 -191163790 - MLT1A2-int LTR MaLR -487 884 824 2471 212 52 47 chr2 62092821 62093476 -191163107 - MLT1A2-int LTR MaLR -1075 660 3 1404 206 12 107 chr2 62093478 62093891 -191162692 - MLT1A2 LTR MaLR 0 374 1 236 317 38 17 chr2 62094364 62094489 -191162094 + MIR SINE MIR 23 146 -62 536 126 42 21 chr2 62095430 62095573 -191161010 + CT-rich Low_complexity Low_complexity 2 147 0 1935 172 22 69 chr2 62096362 62096769 -191159814 + MLT1B LTR MaLR 3 390 0 274 239 28 0 chr2 62097211 62097282 -191159301 - MIR SINE MIR -14 248 176 24 0 0 0 chr2 62098854 62098878 -191157705 + AT_rich Low_complexity Low_complexity 1 24 0 487 286 65 15 chr2 62100362 62100561 -191156022 - MIR SINE MIR -5 257 49 2022 140 0 7 chr2 62101490 62101790 -191154793 + AluSx SINE Alu 1 298 -14 2099 116 10 20 chr2 62103283 62103570 -191153013 + AluSg SINE Alu 1 286 -24 186 43 0 0 chr2 62103570 62103593 -191152990 + (CCAA)n Simple_repeat Simple_repeat 2 24 0 188 185 241 0 chr2 62103976 62104030 -191152553 - L2 LINE L2 -5 3308 3242 947 252 19 0 chr2 62104070 62104284 -191152299 + MER58A DNA MER1_type 1 218 -6 378 61 0 0 chr2 62105065 62105114 -191151469 + (TG)n Simple_repeat Simple_repeat 2 50 0 2695 19 0 16 chr2 62105923 62106239 -191150344 + AluYa5 SINE Alu 1 311 0 307 303 21 21 chr2 62106813 62106955 -191149628 + MER99 DNA DNA 686 827 -1 1492 169 40 40 chr2 62107128 62107624 -191148959 + pTR5 LTR ERV1 741 1236 -1202 331 47 0 0 chr2 62107622 62107665 -191148918 + pTR5 LTR ERV1 350 392 -2046 * 509 293 5 42 chr2 62107967 62108179 -191148404 - MER63A DNA MER1_type -6 204 1 225 139 0 0 chr2 62110681 62110717 -191145866 - MER117 DNA MER1_type -107 90 55 9828 95 18 5 chr2 62111330 62113511 -191143072 + L1PA7 LINE L1 3951 6152 -2 182 163 41 0 chr2 62114873 62114922 -191141661 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 243 125 0 0 chr2 62117007 62117047 -191139536 + (T)n Simple_repeat Simple_repeat 1 40 0 196 53 53 26 chr2 62120173 62120211 -191136372 + A-rich Low_complexity Low_complexity 2 40 0 246 320 80 35 chr2 62121049 62121249 -191135334 - MIR SINE MIR -35 227 19 288 271 21 10 chr2 62121275 62121371 -191135212 + GA-rich Low_complexity Low_complexity 4 100 0 255 183 37 0 chr2 62121383 62121465 -191135118 + GA-rich Low_complexity Low_complexity 2 86 0 208 356 0 23 chr2 62121711 62121798 -191134785 + MIR SINE MIR 31 115 -147 848 190 25 6 chr2 62122159 62122322 -191134261 - FRAM SINE Alu 0 166 1 299 285 62 27 chr2 62122357 62122490 -191134093 - MIR SINE MIR -65 143 43 359 354 85 0 chr2 62123353 62123517 -191133066 - MIR SINE MIR -71 191 14 1136 240 26 62 chr2 62124730 62125118 -191131465 - MLT1A2 LTR MaLR 0 374 1 337 36 95 0 chr2 62126413 62126497 -191130086 + (TA)n Simple_repeat Simple_repeat 1 92 0 620 212 0 29 chr2 62126878 62127015 -191129568 - MER58B DNA MER1_type -5 336 204 41219 47 3 0 chr2 62127133 62133269 -191123314 - L1PA4 LINE L1 -1 6154 4 34 42 0 0 chr2 62135053 62135101 -191121482 + AT_rich Low_complexity Low_complexity 1 48 0 799 252 8 43 chr2 62135116 62135350 -191121233 - MLT1D LTR MaLR 0 505 280 381 102 0 0 chr2 62135395 62135454 -191121129 + (TC)n Simple_repeat Simple_repeat 2 60 0 595 210 51 40 chr2 62135488 62135664 -191120919 - MLT1D LTR MaLR -327 178 1 1986 166 0 3 chr2 62135945 62136247 -191120336 - AluSx SINE Alu -11 301 1 355 308 89 14 chr2 62136247 62136388 -191120195 + MIR SINE MIR 22 173 -89 700 190 104 0 chr2 62136694 62136857 -191119726 + MER104 DNA MER2_type 1 180 0 446 316 69 11 chr2 62137028 62137202 -191119381 + MIR SINE MIR 2 185 -77 1050 254 93 55 chr2 62137551 62138023 -191118560 - MLT1E2 LTR MaLR 0 626 137 215 216 0 0 chr2 62138051 62138088 -191118495 + L2 LINE L2 3261 3297 -16 25 0 0 0 chr2 62138143 62138168 -191118415 + AT_rich Low_complexity Low_complexity 1 25 0 1720 162 170 16 chr2 62138177 62138548 -191118035 - MSTA LTR MaLR 0 428 1 6476 135 175 47 chr2 62138548 62139947 -191116636 - MSTA-int LTR MaLR 0 1580 3 1710 141 176 19 chr2 62139949 62140319 -191116264 - MSTA LTR MaLR 0 428 1 24 0 0 0 chr2 62140410 62140434 -191116149 + AT_rich Low_complexity Low_complexity 1 24 0 241 240 0 0 chr2 62140458 62140508 -191116075 + (TG)n Simple_repeat Simple_repeat 1 50 0 307 286 53 96 chr2 62140609 62140880 -191115703 - L1MC/D LINE L1 -537 5796 5538 504 90 26 0 chr2 62140880 62140958 -191115625 + MADE1 DNA Mariner 1 80 0 307 286 53 96 chr2 62140958 62140987 -191115596 - L1MC/D LINE L1 -795 5538 5509 1831 146 47 65 chr2 62140987 62141335 -191115248 - MLT2A2 LTR ERVL 0 554 212 2280 81 7 7 chr2 62141335 62141630 -191114953 - AluY SINE Alu -16 295 1 1831 146 47 65 chr2 62141630 62141839 -191114744 - MLT2A2 LTR ERVL -342 212 1 22 35 0 0 chr2 62142211 62142240 -191114343 + AT_rich Low_complexity Low_complexity 1 29 0 1943 188 5 11 chr2 62143359 62143726 -191112857 + MLT1A1 LTR MaLR 1 365 0 949 232 0 5 chr2 62144257 62144455 -191112128 - MER58A DNA MER1_type 0 224 28 191 292 0 0 chr2 62144582 62144630 -191111953 - L2 LINE L2 -9 3263 3216 1736 157 53 58 chr2 62145011 62145387 -191111196 - MLT1A2 LTR MaLR 0 374 1 1056 229 108 104 chr2 62146053 62146590 -191109993 + MLT1H LTR MaLR 11 549 0 221 393 62 0 chr2 62148135 62148280 -191108303 + MIR SINE MIR 1 154 -108 368 181 0 0 chr2 62148282 62148354 -191108229 + MER116 DNA Mariner 9 80 0 908 227 56 9 chr2 62149176 62149496 -191107087 + MSTD LTR MaLR 11 392 -4 341 333 0 7 chr2 62149874 62150015 -191106568 + MARNA DNA Mariner 367 506 -80 21 0 0 0 chr2 62150166 62150187 -191106396 + AT_rich Low_complexity Low_complexity 1 21 0 570 304 92 13 chr2 62151131 62151358 -191105225 + MIR SINE MIR 16 260 -2 241 173 27 27 chr2 62152076 62152151 -191104432 + (CAAA)n Simple_repeat Simple_repeat 2 76 0 22 0 0 0 chr2 62152692 62152714 -191103869 + AT_rich Low_complexity Low_complexity 1 22 0 2475 158 17 5 chr2 62153470 62153889 -191102694 + MSTB LTR MaLR 3 426 0 520 316 71 71 chr2 62154324 62154748 -191101835 + MER115 DNA AcHobo 210 633 -60 2300 117 43 6 chr2 62154965 62155316 -191101267 - THE1B LTR MaLR 0 364 1 2071 146 0 9 chr2 62155677 62156029 -191100554 - AluJb SINE Alu 0 349 1 198 132 57 0 chr2 62157030 62157083 -191099500 + (TA)n Simple_repeat Simple_repeat 2 57 0 497 303 106 0 chr2 62157340 62157528 -191099055 + MIR SINE MIR 52 259 -3 236 273 182 28 chr2 62157600 62157743 -191098840 + MIR SINE MIR 49 213 -49 456 294 59 44 chr2 62160611 62160815 -191095768 + MIR SINE MIR 7 213 -49 1819 171 70 8 chr2 62161110 62161466 -191095117 + MSTB LTR MaLR 1 378 -48 206 229 21 0 chr2 62161494 62161542 -191095041 + MIR SINE MIR 195 243 -19 574 88 77 18 chr2 62161615 62161785 -191094798 + (TA)n Simple_repeat Simple_repeat 1 180 0 701 279 62 0 chr2 62162214 62162422 -191094161 - MIR SINE MIR -2 260 40 1013 217 9 5 chr2 62162440 62162657 -191093926 + MER20 DNA MER1_type 1 218 -1 258 56 0 0 chr2 62163241 62163277 -191093306 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 23520 53 18 6 chr2 62163278 62167149 -191089434 - L1PA5 LINE L1 -11 6143 2235 1917 85 8 4 chr2 62167654 62167924 -191088659 - AluY SINE Alu 0 305 35 188 345 185 8 chr2 62168494 62168613 -191087970 + L2 LINE L2 3129 3268 -4 192 206 127 16 chr2 62168663 62168726 -191087857 + MIR SINE MIR 72 141 -121 482 310 68 40 chr2 62168785 62169240 -191087343 + L1ME2 LINE L1 92 559 -5837 2597 268 81 24 chr2 62169252 62169643 -191086940 + L1ME2 LINE L1 3352 3719 -2496 227 0 0 83 chr2 62169643 62169679 -191086904 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 2597 268 81 24 chr2 62169679 62170132 -191086451 + L1ME2 LINE L1 3719 4145 -2070 204 97 0 0 chr2 62170132 62170163 -191086420 + (CA)n Simple_repeat Simple_repeat 2 32 0 2597 268 81 24 chr2 62170163 62170678 -191085905 + L1ME2 LINE L1 4145 4790 -1425 1242 212 38 68 chr2 62170691 62171059 -191085524 - MLT1A2 LTR MaLR -17 357 1 2785 225 35 48 chr2 62171059 62171571 -191085012 + L1ME2 LINE L1 4786 5303 -930 2260 111 0 22 chr2 62171571 62171887 -191084696 - AluSx SINE Alu -3 309 1 2785 225 35 48 chr2 62171887 62172813 -191083770 + L1ME2 LINE L1 5303 6208 -25 2208 122 0 0 chr2 62175138 62175449 -191081134 + AluSx SINE Alu 1 311 -1 2195 96 3 0 chr2 62175454 62175736 -191080847 + AluSp SINE Alu 1 283 -30 186 43 0 0 chr2 62175744 62175767 -191080816 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 234 0 0 0 chr2 62176670 62176696 -191079887 + (TTTTA)n Simple_repeat Simple_repeat 1 26 0 263 226 16 0 chr2 62176707 62176800 -191079783 + (TA)n Simple_repeat Simple_repeat 1 94 0 197 139 23 0 chr2 62176801 62176844 -191079739 + GA-rich Low_complexity Low_complexity 1 44 0 25 0 0 0 chr2 62177000 62177025 -191079558 + AT_rich Low_complexity Low_complexity 1 25 0 344 254 264 35 chr2 62177390 62177591 -191078992 - MLT1J2 LTR MaLR -138 312 66 2030 125 7 0 chr2 62177595 62177876 -191078707 + AluSx SINE Alu 1 283 -29 186 161 0 0 chr2 62179806 62179837 -191076746 + L2 LINE L2 3209 3239 -33 21 0 0 0 chr2 62179880 62179901 -191076682 + AT_rich Low_complexity Low_complexity 1 21 0 313 213 19 0 chr2 62179901 62180009 -191076574 + (TA)n Simple_repeat Simple_repeat 2 111 0 3131 198 119 9 chr2 62180333 62181139 -191075444 - L1MD3 LINE L1 0 7995 5447 2156 108 0 23 chr2 62181224 62181529 -191075054 - AluSq SINE Alu -15 298 1 1447 265 75 2 chr2 62182308 62182365 -191074218 + MLT1F1 LTR MaLR 111 162 -405 475 91 11 11 chr2 62182365 62182453 -191074130 + (TCTA)n Simple_repeat Simple_repeat 4 91 0 1447 265 75 2 chr2 62182453 62182821 -191073762 + MLT1F1 LTR MaLR 162 567 0 259 19 77 19 chr2 62186617 62186669 -191069914 + (TA)n Simple_repeat Simple_repeat 2 56 0 759 50 36 61 chr2 62186671 62186935 -191069648 + (TATAA)n Simple_repeat Simple_repeat 1 257 0 406 365 11 28 chr2 62186975 62187156 -191069427 - MIR SINE MIR -82 180 3 * 591 298 39 5 chr2 62187156 62187352 -191069231 + MIR SINE MIR 60 262 0 2322 191 14 9 chr2 62187589 62188034 -191068549 - MLT2B2 LTR ERVL -48 467 21 444 191 0 0 chr2 62188039 62188154 -191068429 - L1MCa LINE L1 -2940 3600 3486 3804 187 20 57 chr2 62188175 62188801 -191067782 - L1MCa LINE L1 -5502 1038 456 1252 164 26 30 chr2 62188801 62188841 -191067742 - L1MB1 LINE L1 -5 6163 6124 3664 152 61 21 chr2 62188841 62189547 -191067036 + MER50 LTR ERV1 1 734 0 1252 164 26 30 chr2 62189547 62189775 -191066808 - L1MB1 LINE L1 -44 6124 5896 3804 187 20 57 chr2 62189775 62190077 -191066506 - L1MCa LINE L1 -6084 456 144 288 274 206 0 chr2 62190130 62190232 -191066351 - MIR3 SINE MIR -45 163 41 1347 268 66 28 chr2 62191531 62192032 -191064551 + LTR33 LTR ERVL 1 520 -1 21 36 0 0 chr2 62192079 62192107 -191064476 + AT_rich Low_complexity Low_complexity 1 28 0 184 375 34 11 chr2 62192917 62193005 -191063578 + MIR SINE MIR 51 140 -68 244 268 34 7 chr2 62193765 62193852 -191062731 + CT-rich Low_complexity Low_complexity 3 153 0 356 300 100 29 chr2 62194076 62194418 -191062165 - L1MEc LINE L1 -3684 2856 2529 234 0 0 0 chr2 62194891 62194917 -191061666 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 333 0 0 0 chr2 62194916 62194953 -191061630 + (GA)n Simple_repeat Simple_repeat 2 38 0 298 269 61 61 chr2 62194968 62195165 -191061418 - L1MEc LINE L1 -854 2047 1802 259 213 38 38 chr2 62195652 62195732 -191060851 + (TGAA)n Simple_repeat Simple_repeat 3 82 0 2071 115 0 7 chr2 62195760 62196047 -191060536 - AluSg SINE Alu -21 289 5 459 291 118 34 chr2 62197282 62197519 -191059064 - MIR SINE MIR 0 262 6 264 149 0 0 chr2 62198231 62198278 -191058305 + (GGGA)n Simple_repeat Simple_repeat 4 50 0 689 116 17 39 chr2 62198278 62198459 -191058124 + (GAAA)n Simple_repeat Simple_repeat 4 180 0 537 122 30 51 chr2 62198461 62198805 -191057778 + GA-rich Low_complexity Low_complexity 1 336 0 180 0 0 0 chr2 62198805 62198825 -191057758 + (CAAG)n Simple_repeat Simple_repeat 2 21 0 1865 257 57 55 chr2 62199591 62200280 -191056303 + L1ME LINE L1 6 684 -5396 2146 119 7 3 chr2 62200280 62200590 -191055993 - AluSq SINE Alu -2 311 1 1865 257 57 55 chr2 62200590 62201170 -191055413 + L1ME LINE L1 684 1261 -4819 530 345 16 0 chr2 62201180 62201371 -191055212 + MLT1J LTR MaLR 68 261 -250 730 214 85 119 chr2 62201499 62201877 -191054706 - MLT1A1 LTR MaLR 0 365 1 219 88 0 0 chr2 62202248 62202282 -191054301 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 7743 22 0 0 chr2 62202291 62203542 -191053041 - L1PA3 LINE L1 -1 6154 4905 2351 236 31 54 chr2 62204756 62205498 -191051085 + MER21B LTR ERV1 13 737 -126 1661 196 113 19 chr2 62206820 62207247 -191049336 + MLT1C LTR MaLR 1 374 0 277 364 33 0 chr2 62207369 62207490 -191049093 - MIR SINE MIR -73 189 65 230 371 42 48 chr2 62207650 62207817 -191048766 - MIR3 SINE MIR -27 181 16 27 62 0 0 chr2 62208773 62208821 -191047762 + AT_rich Low_complexity Low_complexity 1 48 0 270 0 0 0 chr2 62209134 62209164 -191047419 + (TG)n Simple_repeat Simple_repeat 1 30 0 364 343 16 59 chr2 62209786 62210042 -191046541 + MIR3 SINE MIR 8 252 -10 273 29 0 0 chr2 62210154 62210188 -191046395 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 237 132 0 0 chr2 62211006 62211044 -191045539 + (TCC)n Simple_repeat Simple_repeat 3 40 0 21 0 0 0 chr2 62212312 62212333 -191044250 + AT_rich Low_complexity Low_complexity 1 21 0 1738 182 0 3 chr2 62212333 62212624 -191043959 - AluJb SINE Alu -18 294 5 3773 179 33 61 chr2 62212876 62213042 -191043541 + LTR13 LTR ERVK 1 170 -784 2113 84 7 7 chr2 62213042 62213339 -191043244 - AluY SINE Alu -14 297 1 3773 179 33 61 chr2 62213339 62214154 -191042429 + LTR13 LTR ERVK 170 954 0 8704 103 6 16 chr2 62214154 62215518 -191041065 + HERVK13 LTR ERVK 1 1350 -6766 196 75 25 25 chr2 62216443 62216483 -191040100 + (TA)n Simple_repeat Simple_repeat 2 41 0 280 253 52 23 chr2 62217342 62217504 -191039079 - MLT1J LTR MaLR -344 167 6 500 242 25 0 chr2 62217612 62217732 -191038851 + MER94 DNA DNA 3 125 -9 545 320 0 12 chr2 62218176 62218348 -191038235 - MLT1I LTR MaLR -200 209 40 1154 216 9 0 chr2 62218368 62218590 -191037993 - MER58A DNA MER1_type 0 224 1 1353 176 54 32 chr2 62218641 62218920 -191037663 + AluJb SINE Alu 2 286 -26 1981 194 17 3 chr2 62219079 62219439 -191037144 - MLT1A1 LTR MaLR 0 365 1 333 0 0 0 chr2 62219888 62219925 -191036658 + (CA)n Simple_repeat Simple_repeat 2 38 0 231 36 0 0 chr2 62219924 62219952 -191036631 + (GA)n Simple_repeat Simple_repeat 2 29 0 * 468 0 0 0 chr2 62221529 62221581 -191035002 + (TG)n Simple_repeat Simple_repeat 1 52 0 212 271 188 60 chr2 62222900 62223033 -191033550 + MIR3 SINE MIR 14 163 -45 279 0 0 0 chr2 62224600 62224631 -191031952 + (CACCC)n Simple_repeat Simple_repeat 3 33 0 554 93 12 0 chr2 62225477 62225563 -191031020 + (GA)n Simple_repeat Simple_repeat 2 88 0 249 345 18 9 chr2 62225669 62225779 -191030804 - MIR SINE MIR -48 214 104 565 214 46 122 chr2 62225785 62226023 -191030560 + MER58A DNA MER1_type 5 224 0 398 287 30 0 chr2 62226419 62226520 -191030063 - MER5A DNA MER1_type -77 112 9 273 243 50 26 chr2 62226670 62226792 -191029791 + MER5A DNA MER1_type 1 189 0 203 296 170 37 chr2 62228017 62228152 -191028431 + MER5B DNA MER1_type 14 166 -12 488 268 141 45 chr2 62228169 62228198 -191028385 + MIR SINE MIR 16 41 -221 4227 175 15 33 chr2 62228198 62229080 -191027503 - L1MA10 LINE L1 -1 6333 5468 488 268 141 45 chr2 62229080 62229270 -191027313 + MIR SINE MIR 41 256 -6 741 202 191 0 chr2 62230962 62231150 -191025433 - MER58A DNA MER1_type 0 224 1 296 261 96 17 chr2 62231158 62231273 -191025310 + MER5C DNA MER1_type 1 124 -200 21 36 0 0 chr2 62232599 62232627 -191023956 + AT_rich Low_complexity Low_complexity 1 28 0 241 308 22 22 chr2 62232691 62232782 -191023801 + L3b LINE CR1 1144 1234 -349 1717 53 0 5 chr2 62233335 62233541 -191023042 + AluY SINE Alu 30 234 -77 197 33 33 0 chr2 62233550 62233580 -191023003 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 366 80 0 0 chr2 62235113 62235163 -191021420 + (TG)n Simple_repeat Simple_repeat 1 50 0 570 328 13 26 chr2 62236251 62236480 -191020103 - MIR SINE MIR -21 241 16 284 285 51 29 chr2 62237603 62237740 -191018843 - MIR SINE MIR -4 258 119 24 32 0 0 chr2 62237860 62237891 -191018692 + AT_rich Low_complexity Low_complexity 1 31 0 340 254 42 106 chr2 62238012 62238201 -191018382 + MLT1J LTR MaLR 1 177 -334 253 198 148 0 chr2 62238412 62238493 -191018090 + MIR SINE MIR 170 262 0 2703 112 0 3 chr2 62238539 62238915 -191017668 + THE1C LTR MaLR 1 375 0 9507 126 45 20 chr2 62238915 62240457 -191016126 + THE1C-int LTR MaLR 1 1580 0 2536 106 13 24 chr2 62240457 62240835 -191015748 + THE1C LTR MaLR 1 374 -1 430 271 26 26 chr2 62240974 62241125 -191015458 + MER103 DNA DNA 3 153 -13 334 292 0 0 chr2 62241663 62241752 -191014831 - MLT1I LTR MaLR -253 156 68 317 303 83 38 chr2 62241800 62241932 -191014651 - MIR SINE MIR -89 173 36 2405 85 10 0 chr2 62243737 62244043 -191012540 + AluY SINE Alu 1 309 -2 583 213 76 134 chr2 62245086 62245429 -191011154 + MER20B DNA MER1_type 215 537 -246 235 175 0 35 chr2 62245447 62245504 -191011079 + MER20B DNA MER1_type 729 783 0 21 0 0 0 chr2 62245509 62245530 -191011053 + AT_rich Low_complexity Low_complexity 1 21 0 297 351 108 14 chr2 62246611 62246759 -191009824 + L2 LINE L2 3074 3235 -37 1744 178 0 31 chr2 62247383 62247704 -191008879 + AluJo SINE Alu 1 311 -1 230 304 43 43 chr2 62249839 62249931 -191006652 + MIR SINE MIR 152 243 -19 22 35 0 0 chr2 62249941 62249970 -191006613 + AT_rich Low_complexity Low_complexity 1 29 0 191 114 29 0 chr2 62250264 62250299 -191006284 + (TAG)n Simple_repeat Simple_repeat 1 36 0 484 250 80 75 chr2 62250329 62250471 -191006112 - MIR SINE MIR -30 232 92 2108 169 2 54 chr2 62250471 62250700 -191005883 - MLT1B LTR MaLR 0 390 151 198 0 0 0 chr2 62250700 62250722 -191005861 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 2041 136 3 0 chr2 62250724 62251011 -191005572 - AluSx SINE Alu -24 288 1 2108 169 2 54 chr2 62251011 62251187 -191005396 - MLT1B LTR MaLR -240 150 3 484 250 80 75 chr2 62251187 62251256 -191005327 - MIR SINE MIR -170 92 20 1142 249 66 33 chr2 62251265 62252467 -191004116 - L1MD3 LINE L1 -12 7983 6684 300 53 0 0 chr2 62252481 62252519 -191004064 + (TCTA)n Simple_repeat Simple_repeat 3 40 0 848 166 14 0 chr2 62253007 62253152 -191003431 + MER58B DNA MER1_type 195 341 0 835 229 36 77 chr2 62254761 62255097 -191001486 - MER46C DNA MER2_type -14 324 3 885 208 66 8 chr2 62255102 62255330 -191001253 - MER58A DNA MER1_type 0 224 1 1975 133 77 11 chr2 62256024 62256376 -191000207 - THE1C LTR MaLR 0 375 1 375 276 35 9 chr2 62258965 62259081 -190997502 + MIR SINE MIR 63 181 -81 459 0 0 0 chr2 62259341 62259392 -190997191 + (CA)n Simple_repeat Simple_repeat 2 52 0 2497 78 0 0 chr2 62260045 62260354 -190996229 + AluY SINE Alu 3 311 0 22 0 0 0 chr2 62260492 62260514 -190996069 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr2 62260805 62260834 -190995749 + AT_rich Low_complexity Low_complexity 1 29 0 335 375 57 10 chr2 62261947 62262139 -190994444 + L3 LINE CR1 189 389 -1188 2701 143 10 44 chr2 62262149 62262695 -190993888 - MER41B LTR ERV1 -12 597 107 571 355 30 36 chr2 62262827 62263162 -190993421 + L3 LINE CR1 449 781 -796 276 258 16 0 chr2 62263696 62263758 -190992825 + L2 LINE L2 3250 3312 -1 417 327 75 23 chr2 62264070 62264284 -190992299 - MIR SINE MIR 0 262 38 772 280 35 4 chr2 62264301 62264533 -190992050 + MIR SINE MIR 21 259 -3 391 118 26 0 chr2 62266708 62266784 -190989799 + GA-rich Low_complexity Low_complexity 1 78 0 1132 95 0 11 chr2 62266789 62266968 -190989615 + (GGAA)n Simple_repeat Simple_repeat 4 180 0 354 191 0 0 chr2 62267650 62267718 -190988865 - Charlie1 DNA MER1_type -21 2740 2673 825 264 88 47 chr2 62267854 62268240 -190988343 - Charlie1 DNA MER1_type -2359 402 1 237 284 147 11 chr2 62268254 62268349 -190988234 + MIR SINE MIR 45 152 -110 1162 216 61 3 chr2 62268853 62269150 -190987433 + L1MC4 LINE L1 6862 7175 -867 315 127 14 28 chr2 62269268 62269339 -190987244 + L1MC4 LINE L1 7973 8042 0 1768 180 23 31 chr2 62269962 62270351 -190986232 - MLT1B LTR MaLR -4 386 1 402 312 44 5 chr2 62271475 62271680 -190984903 + LTR16A LTR ERVL 1 213 -237 195 100 0 0 chr2 62273698 62273728 -190982855 + (TTCA)n Simple_repeat Simple_repeat 4 33 0 347 264 167 17 chr2 62274016 62274190 -190982393 + MLT1H LTR MaLR 240 439 -110 464 259 88 29 chr2 62274780 62274950 -190981633 + MIR SINE MIR 71 250 -12 1566 209 58 29 chr2 62275904 62276349 -190980234 - MLT1C LTR MaLR 0 467 10 236 296 11 34 chr2 62277041 62277129 -190979454 + MIR SINE MIR 124 209 -53 300 286 117 19 chr2 62277257 62277411 -190979172 - MIR SINE MIR -8 254 86 306 50 0 0 chr2 62277535 62277575 -190979008 + (CA)n Simple_repeat Simple_repeat 1 40 0 25 0 0 0 chr2 62277628 62277653 -190978930 + AT_rich Low_complexity Low_complexity 1 25 0 256 225 14 28 chr2 62278122 62278193 -190978390 + Charlie7 DNA MER1_type 2543 2612 0 23 68 0 0 chr2 62278597 62278641 -190977942 + AT_rich Low_complexity Low_complexity 1 44 0 188 327 37 19 chr2 62280713 62280820 -190975763 - MIR SINE MIR -73 135 27 974 206 0 6 chr2 62281965 62282145 -190974438 - MER5A DNA MER1_type -10 179 1 27 49 0 0 chr2 62282959 62283000 -190973583 + AT_rich Low_complexity Low_complexity 1 41 0 21 36 0 0 chr2 62283171 62283199 -190973384 + AT_rich Low_complexity Low_complexity 1 28 0 949 268 22 12 chr2 62283207 62283456 -190973127 - MIR SINE MIR -10 252 1 383 247 90 90 chr2 62283611 62283789 -190972794 + Charlie8 DNA MER1_type 1 111 -2306 312 333 21 0 chr2 62284288 62284381 -190972202 + L2 LINE L2 3162 3256 -16 292 162 15 15 chr2 62284416 62284484 -190972099 + GA-rich Low_complexity Low_complexity 3 70 0 205 339 133 18 chr2 62284693 62284858 -190971725 + MER5A DNA MER1_type 3 186 -3 2023 137 0 34 chr2 62285251 62285572 -190971011 + AluSx SINE Alu 1 310 -2 553 268 182 14 chr2 62285761 62285981 -190970602 + L2 LINE L2 2537 2793 -521 1045 292 9 68 chr2 62285984 62286409 -190970174 + MLT1I LTR MaLR 9 408 -1 724 284 200 21 chr2 62286410 62286861 -190969722 + L2 LINE L2 2784 3313 0 250 111 37 0 chr2 62289194 62289248 -190967335 - L1MC4 LINE L1 -1339 6703 6648 703 266 39 39 chr2 62291898 62292131 -190964452 + MIR SINE MIR 28 260 -2 209 161 0 0 chr2 62292132 62292163 -190964420 + (ATG)n Simple_repeat Simple_repeat 2 32 0 2079 118 0 3 chr2 62292276 62292564 -190964019 + AluSx SINE Alu 1 287 -25 243 0 0 0 chr2 62292567 62292594 -190963989 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 205 288 51 0 chr2 62292614 62292673 -190963910 + MIR SINE MIR 56 117 -145 234 264 179 38 chr2 62295053 62295159 -190961424 - MER5A DNA MER1_type -29 160 40 35 0 0 0 chr2 62296135 62296170 -190960413 + AT_rich Low_complexity Low_complexity 1 35 0 5264 96 4 1 chr2 62298044 62298782 -190957801 + L1PB1 LINE L1 5408 6147 -4 1636 211 12 6 chr2 62298866 62299203 -190957380 + MER58B DNA MER1_type 2 340 -1 23 0 0 0 chr2 62299763 62299786 -190956797 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 62300390 62300411 -190956172 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 62301294 62301315 -190955268 + AT_rich Low_complexity Low_complexity 1 21 0 254 325 12 12 chr2 62301374 62301454 -190955129 - L2 LINE L2 -8 3305 3226 28004 35 1 0 chr2 62301793 62305994 -190950589 + L1PA4 LINE L1 1948 6152 -3 25 31 0 0 chr2 62305994 62306026 -190950557 + AT_rich Low_complexity Low_complexity 1 32 0 241 251 14 43 chr2 62306039 62306117 -190950466 + MIR SINE MIR 37 104 -104 585 0 0 0 chr2 62307692 62307757 -190948826 + (TC)n Simple_repeat Simple_repeat 2 66 0 214 147 0 0 chr2 62308295 62308329 -190948254 + (TG)n Simple_repeat Simple_repeat 1 34 0 241 226 75 0 chr2 62308722 62308775 -190947808 + L2 LINE L2 3256 3312 -1 216 234 0 0 chr2 62308867 62308914 -190947669 - MIR SINE MIR -71 191 145 45 98 0 0 chr2 62308919 62309062 -190947521 + AT_rich Low_complexity Low_complexity 1 143 0 274 264 83 50 chr2 62309550 62309671 -190946912 - L2 LINE L2 -606 2708 2584 546 301 85 15 chr2 62309689 62309961 -190946622 + MLT1L LTR MaLR 1 291 -324 1844 168 0 0 chr2 62311670 62311979 -190944604 - AluSx SINE Alu 0 309 1 235 367 56 15 chr2 62312085 62312281 -190944302 + MIR SINE MIR 48 251 -11 261 319 0 37 chr2 62312682 62312851 -190943732 - MLT1L LTR MaLR -125 490 248 294 309 0 0 chr2 62313166 62313250 -190943333 + MIR SINE MIR 74 157 -105 237 286 0 13 chr2 62313322 62313399 -190943184 + MIR SINE MIR 81 156 -106 425 286 0 0 chr2 62314946 62315058 -190941525 + L2 LINE L2 2448 2559 -755 795 290 17 4 chr2 62315431 62315669 -190940914 - MIR SINE MIR -5 257 17 1896 136 29 16 chr2 62316149 62316457 -190940126 + AluSx SINE Alu 1 312 0 479 342 75 22 chr2 62316775 62317003 -190939580 - MIR SINE MIR -2 260 21 216 0 0 0 chr2 62317087 62317111 -190939472 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 225 0 0 0 chr2 62317884 62317909 -190938674 + (T)n Simple_repeat Simple_repeat 1 25 0 264 30 0 0 chr2 62318111 62318144 -190938439 + (TG)n Simple_repeat Simple_repeat 2 34 0 509 118 12 0 chr2 62318553 62318638 -190937945 + L1MB1 LINE L1 6082 6167 -1 204 322 26 35 chr2 62318729 62318844 -190937739 - L2 LINE L2 -10 3303 3190 3393 216 73 11 chr2 62318848 62319661 -190936922 - L1ME1 LINE L1 -5 6161 5299 190 219 88 150 chr2 62319666 62319777 -190936806 + MIR SINE MIR 100 200 -62 2362 133 55 24 chr2 62319777 62320198 -190936385 + Tigger2a DNA MER2_type 1 434 0 190 219 88 150 chr2 62320198 62320246 -190936337 + MIR SINE MIR 200 249 -13 1321 148 8 0 chr2 62320582 62320818 -190935765 - L1MA4 LINE L1 -11 6289 6052 352 330 84 17 chr2 62320858 62321155 -190935428 + L1ME LINE L1 5392 5708 -462 1782 128 6 87 chr2 62323604 62323925 -190932658 + AluSx SINE Alu 3 297 -15 22 0 0 0 chr2 62323935 62323957 -190932626 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 62324134 62324155 -190932428 + AT_rich Low_complexity Low_complexity 1 21 0 285 225 35 7 chr2 62324978 62325120 -190931463 + (TA)n Simple_repeat Simple_repeat 2 147 0 369 75 0 0 chr2 62325136 62325189 -190931394 + (TG)n Simple_repeat Simple_repeat 1 53 0 22 0 0 0 chr2 62326661 62326683 -190929900 + AT_rich Low_complexity Low_complexity 1 22 0 362 222 19 37 chr2 62327186 62327294 -190929289 + LTR33A LTR ERVL 418 523 0 22 56 0 0 chr2 62327948 62327984 -190928599 + AT_rich Low_complexity Low_complexity 1 36 0 180 348 101 0 chr2 62328956 62329045 -190927538 - L2 LINE L2 -50 3222 3125 353 330 93 30 chr2 62330299 62330535 -190926048 - MIR SINE MIR -11 251 1 216 250 0 0 chr2 62331656 62331700 -190924883 + CT-rich Low_complexity Low_complexity 1 44 0 181 212 0 0 chr2 62332622 62332655 -190923928 + L2 LINE L2 3251 3283 -30 223 303 0 0 chr2 62332689 62332755 -190923828 + MIR SINE MIR 89 154 -108 298 234 413 18 chr2 62332773 62333107 -190923476 + LTR33A LTR ERVL 2 467 -56 281 211 127 0 chr2 62333113 62333184 -190923399 + LTR33A LTR ERVL 444 523 0 257 217 36 48 chr2 62333186 62333269 -190923314 + MIR SINE MIR 162 243 -19 260 294 43 0 chr2 62333974 62334066 -190922517 + MIR SINE MIR 81 176 -86 21 0 0 0 chr2 62335982 62336003 -190920580 + AT_rich Low_complexity Low_complexity 1 21 0 205 357 27 18 chr2 62337180 62337292 -190919291 + MIR SINE MIR 33 145 -63 1607 169 86 38 chr2 62339373 62339745 -190916838 + MLT1B LTR MaLR 1 390 0 22 0 0 0 chr2 62339907 62339929 -190916654 + AT_rich Low_complexity Low_complexity 1 22 0 226 315 112 0 chr2 62340242 62340420 -190916163 + L1ME4a LINE L1 4918 5115 -1031 21 0 0 0 chr2 62340843 62340864 -190915719 + AT_rich Low_complexity Low_complexity 1 21 0 723 251 147 44 chr2 62340888 62341393 -190915190 + L1ME4a LINE L1 5520 6076 -45 349 351 21 31 chr2 62341518 62341709 -190914874 + MER5A DNA MER1_type 1 189 0 551 251 27 43 chr2 62344285 62344472 -190912111 + L2 LINE L2 3115 3298 -15 21 36 0 0 chr2 62344532 62344560 -190912023 + AT_rich Low_complexity Low_complexity 1 28 0 439 226 28 15 chr2 62344874 62345006 -190911577 - MLT1F1 LTR MaLR 0 571 451 1269 134 29 58 chr2 62345058 62345175 -190911408 + L1MA5A LINE L1 6026 6145 -152 1982 139 0 0 chr2 62345175 62345488 -190911095 + AluSx SINE Alu 1 313 0 1269 134 29 58 chr2 62345488 62345644 -190910939 + L1MA5A LINE L1 6145 6292 -5 648 233 103 118 chr2 62345676 62346092 -190910491 - MLT1F1 LTR MaLR -154 413 1 445 206 8 10 chr2 62346485 62346593 -190909990 - L1MA10 LINE L1 -23 6285 6035 670 194 6 12 chr2 62346867 62347031 -190909552 - L1MC3 LINE L1 -2 8036 7670 207 286 32 0 chr2 62347056 62347119 -190909464 + L2 LINE L2 2757 2821 -493 23 0 0 0 chr2 62349223 62349246 -190907337 + AT_rich Low_complexity Low_complexity 1 23 0 344 285 51 19 chr2 62349505 62349663 -190906920 + L1ME LINE L1 330 492 -5904 296 342 32 42 chr2 62349738 62349928 -190906655 + L1ME LINE L1 646 833 -5563 291 285 25 102 chr2 62349948 62350183 -190906400 + L1ME LINE L1 771 987 -5422 3217 253 70 22 chr2 62350183 62351609 -190904974 + L1ME LINE L1 2722 4215 -2191 2464 247 57 5 chr2 62351610 62352387 -190904196 - L1M4 LINE L1 -743 5403 4587 608 241 98 17 chr2 62352415 62352589 -190903994 - MIR SINE MIR -7 255 68 309 264 64 64 chr2 62352960 62353070 -190903513 - L2 LINE L2 -4 3268 3159 234 0 0 0 chr2 62354366 62354392 -190902191 + (A)n Simple_repeat Simple_repeat 1 26 0 254 197 16 49 chr2 62356429 62356490 -190900093 - L2 LINE L2 0 3272 3214 31 20 0 20 chr2 62356514 62356536 -190900047 + AT_rich Low_complexity Low_complexity 1 22 -26 1629 203 3 0 chr2 62356536 62356822 -190899761 - AluJo SINE Alu -25 287 1 31 20 0 20 chr2 62356822 62356848 -190899735 + AT_rich Low_complexity Low_complexity 22 48 0 307 316 84 55 chr2 62356851 62357088 -190899495 + L1MEd LINE L1 122 365 -5754 268 307 148 50 chr2 62357331 62357608 -190898975 + L1MEd LINE L1 950 1253 -4866 278 366 37 10 chr2 62357709 62358007 -190898576 + L1MEd LINE L1 1426 1731 -4579 1816 187 0 13 chr2 62358129 62358445 -190898138 + AluJb SINE Alu 1 312 0 393 302 90 31 chr2 62358476 62358764 -190897819 + L1MEd LINE L1 1911 2215 -4095 377 143 0 13 chr2 62358769 62358846 -190897737 + (GA)n Simple_repeat Simple_repeat 1 76 0 219 261 7 28 chr2 62358819 62358961 -190897622 + GA-rich Low_complexity Low_complexity 3 141 0 * 441 274 208 23 chr2 62358963 62359266 -190897317 + L1MEd LINE L1 2252 2610 -3519 364 162 0 15 chr2 62359298 62359366 -190897217 + MLT2A2 LTR ERVL 387 453 0 363 280 76 95 chr2 62359372 62360023 -190896560 + L1MEd LINE L1 3056 3750 -2379 1021 332 12 29 chr2 62360024 62360440 -190896143 + MLT1I LTR MaLR 1 409 0 673 273 64 81 chr2 62360539 62360848 -190895735 + L1MEd LINE L1 3861 4174 -1955 2537 61 0 0 chr2 62360848 62361158 -190895425 + AluY SINE Alu 1 310 -1 673 273 64 81 chr2 62361158 62361630 -190894953 + L1MEd LINE L1 4174 4630 -1499 556 104 0 0 chr2 62361630 62361707 -190894876 + MADE1 DNA Mariner 2 78 -2 673 273 64 81 chr2 62361707 62361747 -190894836 + L1MEd LINE L1 4630 4669 -1460 303 276 9 9 chr2 62361821 62361926 -190894657 + L1MEd LINE L1 4859 4963 -1166 186 103 0 0 chr2 62361955 62361984 -190894599 + (TTAAA)n Simple_repeat Simple_repeat 4 32 0 764 22 0 0 chr2 62362562 62362651 -190893932 + 5S rRNA rRNA 1 89 -32 275 197 16 16 chr2 62362913 62362974 -190893609 - L1P LINE L1 -1906 4240 4180 23 0 0 0 chr2 62363231 62363254 -190893329 + AT_rich Low_complexity Low_complexity 1 23 0 1585 157 17 37 chr2 62363254 62363548 -190893035 - AluJo SINE Alu -24 288 1 471 299 22 4 chr2 62363556 62363787 -190892796 - L1M4 LINE L1 -2275 3871 3637 2654 180 27 0 chr2 62363937 62364464 -190892119 - L1MB8 LINE L1 -1 6177 5637 25 31 0 0 chr2 62364545 62364577 -190892006 + AT_rich Low_complexity Low_complexity 1 32 0 432 245 10 1 chr2 62364594 62364705 -190891878 - L1MB8 LINE L1 -558 5626 5530 1980 200 65 5 chr2 62364774 62365022 -190891561 - L1MB8 LINE L1 -614 5570 5338 1906 58 12 8 chr2 62365022 62365279 -190891304 - L1PA13 LINE L1 -5 6158 5901 1980 200 65 5 chr2 62365279 62365646 -190890937 - L1MB8 LINE L1 -846 5338 4917 320 331 40 14 chr2 62365898 62366046 -190890537 + L1MC4a LINE L1 5775 5926 -1882 43993 42 3 0 chr2 62366690 62372823 -190883760 + L1PA4 LINE L1 2 6152 -3 2575 129 5 0 chr2 62374170 62374543 -190882040 + THE1C LTR MaLR 1 375 0 405 315 91 26 chr2 62375194 62375572 -190881011 + L1ME LINE L1 5255 5661 -460 494 213 0 0 chr2 62375620 62375714 -190880869 + MLT1F1 LTR MaLR 2 95 -472 845 207 50 0 chr2 62375714 62375912 -190880671 - L1MA4 LINE L1 -6 6294 6087 1722 222 71 55 chr2 62375913 62376390 -190880193 + MLT1F1 LTR MaLR 63 547 -20 31 58 0 0 chr2 62376735 62376787 -190879796 + AT_rich Low_complexity Low_complexity 1 52 0 472 284 32 26 chr2 62378997 62379152 -190877431 - MIR SINE MIR -73 189 34 29 70 0 0 chr2 62380511 62380568 -190876015 + AT_rich Low_complexity Low_complexity 1 57 0 835 306 103 21 chr2 62380878 62381296 -190875287 - L2 LINE L2 -7 3306 2855 462 298 94 48 chr2 62381541 62381913 -190874670 - L2 LINE L2 -1038 2276 1888 218 32 32 0 chr2 62382678 62382709 -190873874 + (GAAAA)n Simple_repeat Simple_repeat 2 33 0 367 304 10 77 chr2 62383648 62383799 -190872784 + MER5A DNA MER1_type 9 146 -43 3315 137 20 5 chr2 62383799 62384361 -190872222 - L1MC1 LINE L1 0 6333 5764 367 304 10 77 chr2 62384361 62384403 -190872180 + MER5A DNA MER1_type 146 189 0 264 200 0 0 chr2 62384511 62384581 -190872002 + (TCTA)n Simple_repeat Simple_repeat 3 72 0 1443 182 122 18 chr2 62385106 62385435 -190871148 + MLT1A1 LTR MaLR 1 363 -2 420 202 96 0 chr2 62386281 62386375 -190870208 + MER58 DNA MER1_type 1 103 -112 821 298 83 26 chr2 62386509 62386929 -190869654 + MLT1J2 LTR MaLR 4 447 -3 615 266 82 39 chr2 62387501 62387734 -190868849 + MIR SINE MIR 20 262 0 10272 73 5 0 chr2 62389418 62389765 -190866818 + L1PA7 LINE L1 3936 4280 -1874 2264 104 0 0 chr2 62389765 62390062 -190866521 + AluSc SINE Alu 1 297 -12 10272 73 5 0 chr2 62390062 62391960 -190864623 + L1PA7 LINE L1 4280 6149 -5 24 0 0 0 chr2 62392148 62392172 -190864411 + AT_rich Low_complexity Low_complexity 1 24 0 23 54 0 0 chr2 62392722 62392759 -190863824 + AT_rich Low_complexity Low_complexity 1 37 0 440 354 90 5 chr2 62394709 62394932 -190861651 - MIR SINE MIR -12 250 9 227 223 54 71 chr2 62396089 62396201 -190860382 - MIR SINE MIR -43 219 110 28 48 0 0 chr2 62396581 62396623 -190859960 + AT_rich Low_complexity Low_complexity 1 42 0 257 237 0 66 chr2 62398193 62398269 -190858314 + HAL1b LINE L1 356 426 -922 183 80 0 0 chr2 62398986 62399011 -190857572 + (TG)n Simple_repeat Simple_repeat 2 26 0 300 347 96 28 chr2 62399053 62399416 -190857167 - L1ME4a LINE L1 -133 5988 5601 1948 143 62 8 chr2 62400138 62400494 -190856089 + THE1C LTR MaLR 1 375 0 344 232 89 0 chr2 62400680 62400693 -190855890 - L1MA10 LINE L1 0 6334 6322 2457 237 102 34 chr2 62400693 62401927 -190854656 - L1ME1 LINE L1 -4 6231 4901 345 219 24 0 chr2 62401934 62402016 -190854567 - L1ME1 LINE L1 -1602 4613 4530 932 87 0 0 chr2 62402016 62402142 -190854441 - AluY SINE Alu -14 297 172 1754 262 61 10 chr2 62402148 62402574 -190854009 - L1ME1 LINE L1 -1678 4537 4067 180 0 0 0 chr2 62402574 62402594 -190853989 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1754 262 61 10 chr2 62402594 62402792 -190853791 - L1ME1 LINE L1 -2148 4067 3881 23 78 0 0 chr2 62402946 62402997 -190853586 + AT_rich Low_complexity Low_complexity 1 51 0 1218 239 3 16 chr2 62403044 62403354 -190853229 + MER63 DNA MER1_type 703 1008 -52 1594 243 56 44 chr2 62403399 62403719 -190852864 - MLT1D LTR MaLR 0 505 175 2271 104 0 0 chr2 62403719 62404017 -190852566 + AluSq SINE Alu 1 298 -15 1594 243 56 44 chr2 62404017 62404195 -190852388 - MLT1D LTR MaLR -330 175 1 1113 307 24 54 chr2 62404231 62404772 -190851811 - L1ME1 LINE L1 -5835 561 37 23 0 0 0 chr2 62404837 62404860 -190851723 + AT_rich Low_complexity Low_complexity 1 23 0 300 223 208 35 chr2 62405326 62405523 -190851060 + L1M4 LINE L1 2130 2360 -3786 1550 132 4 0 chr2 62405633 62405884 -190850699 - L1PA13 LINE L1 0 6163 5912 679 206 101 49 chr2 62406097 62406344 -190850239 - MIR SINE MIR 0 262 3 577 190 0 15 chr2 62406570 62406707 -190849876 + GA-rich Low_complexity Low_complexity 2 136 0 250 275 14 0 chr2 62407505 62407574 -190849009 + (TG)n Simple_repeat Simple_repeat 1 70 0 282 255 248 26 chr2 62407635 62407788 -190848795 + L2 LINE L2 3114 3300 -13 1176 245 85 27 chr2 62408723 62409136 -190847447 + MER63C DNA MER1_type 274 710 -220 212 261 54 0 chr2 62409238 62409330 -190847253 + (TATG)n Simple_repeat Simple_repeat 2 98 0 378 0 0 0 chr2 62410221 62410263 -190846320 + (CA)n Simple_repeat Simple_repeat 2 43 0 525 265 159 28 chr2 62412137 62412564 -190844019 + L1MC4a LINE L1 5665 6147 -1661 30 83 0 0 chr2 62413822 62413894 -190842689 + AT_rich Low_complexity Low_complexity 1 72 0 204 40 0 0 chr2 62414144 62414169 -190842414 + (T)n Simple_repeat Simple_repeat 1 25 0 401 173 86 0 chr2 62414259 62414340 -190842243 + L1MD1 LINE L1 26 113 -6427 4387 222 57 35 chr2 62414355 62415591 -190840992 + L1MD1 LINE L1 580 1842 -4698 * 4434 199 57 36 chr2 62415590 62417030 -190839553 + L1MD1 LINE L1 5064 6517 -119 2031 129 17 0 chr2 62417030 62417325 -190839258 + AluSg SINE Alu 2 301 -9 4434 199 57 36 chr2 62417325 62417448 -190839135 + L1MD1 LINE L1 6517 6636 0 361 264 86 58 chr2 62417479 62417653 -190838930 + MLT2B1 LTR ERVL 261 439 -81 511 168 80 0 chr2 62417841 62417954 -190838629 + L1M2 LINE L1 3 124 -6725 10318 123 7 8 chr2 62418054 62419715 -190836868 + L1P LINE L1 1553 3210 -2936 390 291 0 0 chr2 62419763 62419880 -190836703 + C-rich Low_complexity Low_complexity 1 117 0 287 350 0 0 chr2 62419980 62420083 -190836500 + CT-rich Low_complexity Low_complexity 3 105 0 349 265 12 30 chr2 62420165 62420331 -190836252 + CT-rich Low_complexity Low_complexity 3 165 0 328 364 71 18 chr2 62420432 62420657 -190835926 + L3 LINE CR1 1118 1354 -223 1979 125 30 0 chr2 62420663 62420958 -190835625 - AluSx SINE Alu -8 304 1 288 111 0 0 chr2 62421032 62421077 -190835506 - Charlie1b DNA MER1_type -76 447 403 * 2623 127 3 8 chr2 62421063 62421449 -190835134 + MER4E LTR ERV1 368 751 -28 1576 201 67 13 chr2 62421454 62421735 -190834848 - Charlie1b DNA MER1_type -2350 411 102 1502 105 9 0 chr2 62421735 62421945 -190834638 + AluY SINE Alu 91 302 -9 1576 201 67 13 chr2 62421945 62422051 -190834532 - Charlie1b DNA MER1_type -2659 102 3 218 300 71 57 chr2 62422053 62422193 -190834390 + L3 LINE CR1 1361 1502 -75 512 285 173 22 chr2 62422325 62422602 -190833981 - L3 LINE CR1 -13 1564 1246 5674 173 31 6 chr2 62473042 62474502 -190782081 + L1PB1 LINE L1 4280 5796 -355 234 91 0 0 chr2 62474502 62474535 -190782048 + (TA)n Simple_repeat Simple_repeat 2 34 0 5674 173 31 6 chr2 62474535 62474899 -190781684 + L1PB1 LINE L1 5796 6149 -2 23 0 0 0 chr2 62474902 62474925 -190781658 + AT_rich Low_complexity Low_complexity 1 23 0 2181 193 91 6 chr2 62474925 62475277 -190781306 + L1M2 LINE L1 4980 5301 -990 383 38 19 0 chr2 62475277 62475330 -190781253 + (TA)n Simple_repeat Simple_repeat 2 55 0 2181 193 91 6 chr2 62475330 62475719 -190780864 + L1M2 LINE L1 5301 5789 -502 14136 196 26 24 chr2 62475769 62481055 -190775528 - L1PB1 LINE L1 -185 6682 1364 2545 184 114 3 chr2 62481077 62481741 -190774842 - L1PB1 LINE L1 -5700 1163 419 1388 183 32 23 chr2 62481730 62482213 -190774370 + L1M4 LINE L1 5076 5566 -618 * 243 206 10 21 chr2 62483843 62483940 -190772643 + GA-rich Low_complexity Low_complexity 4 99 0 2190 113 0 0 chr2 62484101 62484394 -190772189 - AluSx SINE Alu -19 293 1 495 0 0 0 chr2 62484873 62484928 -190771655 + (TA)n Simple_repeat Simple_repeat 1 55 0 240 258 0 43 chr2 62485111 62485204 -190771379 - L1ME LINE L1 -304 5866 5778 2369 109 0 0 chr2 62485204 62485507 -190771076 - AluSx SINE Alu -9 303 1 334 269 34 24 chr2 62485792 62486000 -190770583 - L1ME LINE L1 -701 5463 5254 657 275 157 18 chr2 62486200 62486658 -190769925 + L1M4 LINE L1 3665 4186 -1960 634 316 68 42 chr2 62486679 62487352 -190769231 + L1M4 LINE L1 4232 4922 -1224 2493 67 3 10 chr2 62488044 62488356 -190768227 + AluY SINE Alu 1 310 -1 368 167 0 13 chr2 62489515 62489593 -190766990 + CT-rich Low_complexity Low_complexity 3 79 0 985 146 0 76 chr2 62490177 62490362 -190766221 - FAM SINE Alu -4 171 1 1899 281 62 7 chr2 62490688 62491253 -190765330 - L3 LINE CR1 -385 1192 597 244 188 87 43 chr2 62491444 62491513 -190765070 - L2 LINE L2 0 3313 3242 487 302 56 17 chr2 62491514 62491693 -190764890 - L2 LINE L2 -515 2799 2614 222 350 13 83 chr2 62492548 62492705 -190763878 - L2 LINE L2 0 3313 3168 842 331 87 20 chr2 62492798 62493191 -190763392 + L2 LINE L2 2892 3310 -3 234 0 0 0 chr2 62494369 62494395 -190762188 + (T)n Simple_repeat Simple_repeat 1 26 0 331 240 16 50 chr2 62496256 62496377 -190760206 - L2 LINE L2 -169 3144 3028 216 238 0 119 chr2 62496555 62496656 -190759927 - L2 LINE L2 -63 3250 3162 267 211 0 0 chr2 62497030 62497087 -190759496 - MLT1A2 LTR MaLR -15 375 319 6951 60 2 30 chr2 62497118 62498404 -190758179 - L1PA7 LINE L1 -2 6152 4882 10432 94 0 1 chr2 62498404 62499959 -190756624 + L1PA7 LINE L1 3317 4869 -1277 1022 207 27 72 chr2 62499959 62500292 -190756291 - MLT1A2 LTR MaLR -56 318 1 2255 129 28 6 chr2 62500365 62500721 -190755862 + THE1B LTR MaLR 1 364 0 222 346 75 37 chr2 62502977 62503165 -190753418 + L2 LINE L2 2895 3089 -183 238 304 78 29 chr2 62503485 62503587 -190752996 + L2 LINE L2 3182 3288 -25 256 360 45 11 chr2 62504216 62504305 -190752278 - MIR SINE MIR -100 108 17 361 216 45 27 chr2 62505182 62505293 -190751290 + Charlie8 DNA MER1_type 103 215 -2202 22 0 0 0 chr2 62505426 62505448 -190751135 + AT_rich Low_complexity Low_complexity 1 22 0 859 277 50 12 chr2 62505735 62506056 -190750527 + LTR16C LTR ERVL 159 491 0 321 355 114 11 chr2 62506105 62506367 -190750216 + L3 LINE CR1 1133 1421 -156 396 0 0 0 chr2 62507097 62507141 -190749442 + (A)n Simple_repeat Simple_repeat 1 44 0 25 31 0 0 chr2 62508604 62508636 -190747947 + AT_rich Low_complexity Low_complexity 1 32 0 1654 223 8 14 chr2 62509274 62509641 -190746942 + MLT1A1 LTR MaLR 1 365 0 699 302 38 40 chr2 62509961 62510133 -190746450 - L1ME3A LINE L1 -235 5935 5764 1491 208 57 16 chr2 62510133 62510503 -190746080 - MLT1B LTR MaLR -3 387 3 699 302 38 40 chr2 62510503 62511012 -190745571 - L1ME3A LINE L1 -406 5764 5255 2147 108 7 0 chr2 62511023 62511310 -190745273 + AluSc SINE Alu 1 289 -20 185 302 71 71 chr2 62511864 62512033 -190744550 - MIR SINE MIR -59 203 35 1895 141 29 0 chr2 62512355 62512661 -190743922 - MER1B DNA MER1_type -23 316 2 824 314 76 33 chr2 62512673 62513131 -190743452 + L2 LINE L2 2835 3312 -1 218 81 27 0 chr2 62513137 62513174 -190743409 + (TGAA)n Simple_repeat Simple_repeat 2 39 0 521 300 78 0 chr2 62513341 62513521 -190743062 + MIR SINE MIR 8 201 -61 292 312 50 45 chr2 62515501 62515703 -190740880 - L2 LINE L2 -26 3287 3085 * 409 214 206 8 chr2 62515701 62515832 -190740751 + MER5A DNA MER1_type 26 182 -7 24 32 0 0 chr2 62516125 62516156 -190740427 + AT_rich Low_complexity Low_complexity 1 31 0 184 393 0 11 chr2 62516284 62516373 -190740210 + MIR SINE MIR 49 136 -126 1084 246 58 30 chr2 62516623 62516952 -190739631 + MLT1A1 LTR MaLR 28 365 0 6515 195 94 42 chr2 62516952 62517152 -190739431 + MLT1A1-int LTR MaLR 1 189 -1546 6653 146 24 23 chr2 62517152 62518382 -190738201 + Tigger3b DNA MER2_type 1 1231 0 6515 195 94 42 chr2 62518382 62519776 -190736807 + MLT1A1-int LTR MaLR 189 1685 -50 2506 45 0 26 chr2 62519776 62520085 -190736498 - AluY SINE Alu -10 301 1 6515 195 94 42 chr2 62520085 62520139 -190736444 + MLT1A1-int LTR MaLR 1685 1735 0 741 204 122 69 chr2 62520139 62520384 -190736199 + MLT1A1 LTR MaLR 1 258 -107 654 117 0 0 chr2 62521429 62521549 -190735034 + (TG)n Simple_repeat Simple_repeat 1 120 0 210 291 0 45 chr2 62521613 62521723 -190734860 + GA-rich Low_complexity Low_complexity 1 105 0 214 278 143 23 chr2 62521815 62521958 -190734625 - MIR SINE MIR -61 147 33 21 0 0 0 chr2 62522022 62522043 -190734540 + AT_rich Low_complexity Low_complexity 1 21 0 271 339 30 18 chr2 62522142 62522307 -190734276 - L2 LINE L2 -217 3096 2930 287 346 59 0 chr2 62523189 62523290 -190733293 + L2 LINE L2 3157 3263 -9 23 0 0 0 chr2 62523406 62523429 -190733154 + AT_rich Low_complexity Low_complexity 1 23 0 204 179 0 0 chr2 62523429 62523468 -190733115 + (TA)n Simple_repeat Simple_repeat 2 40 0 23 0 0 0 chr2 62524788 62524811 -190731772 + AT_rich Low_complexity Low_complexity 1 23 0 377 233 55 103 chr2 62524910 62525056 -190731527 + MIR SINE MIR 106 244 -18 392 288 20 20 chr2 62525562 62525708 -190730875 - MIR SINE MIR -48 214 69 182 352 90 50 chr2 62525860 62526161 -190730422 + L2 LINE L2 2654 2966 -348 646 297 92 24 chr2 62527027 62527397 -190729186 - L2 LINE L2 -839 2475 2081 233 329 0 14 chr2 62527428 62527498 -190729085 - L2 LINE L2 -1171 2143 2075 240 130 0 0 chr2 62529522 62529568 -190727015 + (TTCA)n Simple_repeat Simple_repeat 3 48 0 206 302 35 78 chr2 62530677 62530793 -190725790 - L3 LINE CR1 -7 1570 1460 202 305 99 72 chr2 62530814 62531037 -190725546 - L3b LINE CR1 -201 1382 1154 775 215 12 23 chr2 62531135 62531307 -190725276 - MER5B DNA MER1_type 0 178 9 473 249 51 40 chr2 62531306 62531483 -190725100 + MIR SINE MIR 83 261 -1 * 245 283 8 49 chr2 62532004 62532086 -190724497 - MIR3 SINE MIR -48 160 78 876 269 71 27 chr2 62532411 62532686 -190723897 + L1ME1 LINE L1 726 987 -5409 2779 198 91 9 chr2 62532686 62533338 -190723245 - MER44D DNA MER2_type 0 705 1 876 269 71 27 chr2 62533338 62533653 -190722930 + L1ME1 LINE L1 987 1342 -5054 4953 147 21 14 chr2 62533738 62534582 -190722001 - Tigger1 DNA MER2_type -1 2417 1568 * 7959 158 32 22 chr2 62534580 62535166 -190721417 - Tigger1 DNA MER2_type -983 1435 856 2183 103 7 0 chr2 62535166 62535458 -190721125 + AluSp SINE Alu 1 294 -19 7959 158 32 22 chr2 62535458 62536293 -190720290 - Tigger1 DNA MER2_type -1562 856 1 749 301 40 36 chr2 62536314 62536868 -190719715 + L1ME1 LINE L1 1445 2000 -4396 1390 168 128 7 chr2 62536870 62537167 -190719416 - MER44D DNA MER2_type -6 603 1 4058 279 96 31 chr2 62537173 62539385 -190717198 + L1ME1 LINE L1 2007 4376 -1839 2234 113 0 3 chr2 62539385 62539695 -190716888 + AluSc SINE Alu 1 309 0 4058 279 96 31 chr2 62539695 62540151 -190716432 + L1ME1 LINE L1 4376 4801 -1414 21 0 0 0 chr2 62540157 62540178 -190716405 + AT_rich Low_complexity Low_complexity 1 21 0 3012 237 42 43 chr2 62540187 62540378 -190716205 + L1ME1 LINE L1 5016 5206 -1029 204 40 0 0 chr2 62540378 62540403 -190716180 + (CA)n Simple_repeat Simple_repeat 2 26 0 3012 237 42 43 chr2 62540403 62541436 -190715147 + L1ME1 LINE L1 5206 6227 -8 209 450 0 0 chr2 62542508 62542608 -190713975 + L3 LINE CR1 1106 1205 -372 232 338 14 14 chr2 62542696 62542767 -190713816 + L3 LINE CR1 1384 1454 -123 6624 174 18 7 chr2 62542775 62544080 -190712503 + L1MA8 LINE L1 3229 4548 -1598 4456 100 0 2 chr2 62544077 62544698 -190711885 - L1P LINE L1 -1509 4637 4018 * 2194 119 0 19 chr2 62544717 62545035 -190711548 - AluSx SINE Alu 0 312 1 6513 84 10 0 chr2 62545041 62546561 -190710022 + L1PA8 LINE L1 4648 6178 0 4315 169 24 3 chr2 62546563 62548051 -190708532 + L1MA8 LINE L1 4533 6050 -241 989 181 0 94 chr2 62548056 62548333 -190708250 + L1MB8 LINE L1 5928 6178 0 252 313 96 68 chr2 62548499 62549039 -190707544 - L2 LINE L2 -828 2486 1932 237 314 20 10 chr2 62549615 62549717 -190706866 - L2 LINE L2 -1850 1464 1362 1785 168 39 6 chr2 62550616 62550973 -190705610 + L1MA7 LINE L1 5913 6281 -10 684 231 56 36 chr2 62551619 62551870 -190704713 - ORSL DNA AcHobo -19 256 1 334 213 0 0 chr2 62554017 62554078 -190702505 + L2 LINE L2 3251 3311 -2 198 103 0 0 chr2 62554941 62554970 -190701613 + (TATG)n Simple_repeat Simple_repeat 2 30 0 188 282 171 51 chr2 62555184 62555301 -190701282 - MIR SINE MIR -112 150 20 283 333 74 7 chr2 62556583 62556718 -190699865 + MIR SINE MIR 112 255 -7 687 307 28 5 chr2 62557050 62557268 -190699315 + MIR SINE MIR 2 224 -38 298 177 48 0 chr2 62557831 62557893 -190698690 + MIR SINE MIR 99 163 -99 2120 107 3 3 chr2 62558197 62558495 -190698088 - MER41A LTR ERV1 -256 298 1 2085 138 0 3 chr2 62558868 62559179 -190697404 - AluSx SINE Alu -2 310 1 37 39 0 0 chr2 62559777 62559828 -190696755 + AT_rich Low_complexity Low_complexity 1 51 0 26 0 0 0 chr2 62560165 62560191 -190696392 + AT_rich Low_complexity Low_complexity 1 26 0 23 78 0 0 chr2 62560243 62560294 -190696289 + AT_rich Low_complexity Low_complexity 1 51 0 576 171 19 9 chr2 62560522 62560627 -190695956 - AluJb SINE Alu -5 307 202 23 0 0 0 chr2 62560809 62560832 -190695751 + AT_rich Low_complexity Low_complexity 1 23 0 11216 219 21 16 chr2 62560832 62564729 -190691854 - L1PA16 LINE L1 -9 6157 2242 1649 201 7 0 chr2 62564771 62565065 -190691518 + AluJo SINE Alu 1 296 -16 226 241 23 0 chr2 62565090 62565177 -190691406 + CT-rich Low_complexity Low_complexity 2 90 0 207 182 0 0 chr2 62565463 62565496 -190691087 - L2 LINE L2 -14 3299 3267 212 259 0 17 chr2 62565885 62565943 -190690640 + (TAG)n Simple_repeat Simple_repeat 2 58 0 308 229 133 0 chr2 62569108 62569191 -190687392 + MIR SINE MIR 79 172 -90 943 61 30 0 chr2 62570431 62570562 -190686021 - MER85 DNA T2_type -4 135 1 1365 242 71 45 chr2 62571243 62571706 -190684877 + MLT1H LTR MaLR 46 520 -29 244 239 0 18 chr2 62571862 62571975 -190684608 + (TA)n Simple_repeat Simple_repeat 2 112 0 207 170 0 38 chr2 62573356 62573409 -190683174 + A-rich Low_complexity Low_complexity 4 54 0 704 143 27 0 chr2 62573944 62574056 -190682527 + L1MC1 LINE L1 6013 6127 -206 2609 89 11 0 chr2 62574056 62574405 -190682178 + THE1A LTR MaLR 1 353 -2 11503 102 10 1 chr2 62574407 62575973 -190680610 + THE1A-int LTR MaLR 1 1580 0 1935 144 51 38 chr2 62575973 62576389 -190680194 + THE1A LTR MaLR 1 428 0 1265 162 5 0 chr2 62576389 62576599 -190679984 + L1MC1 LINE L1 6123 6333 0 283 268 0 14 chr2 62577475 62577546 -190679037 + Tigger5 DNA MER2_type 2251 2320 -3 327 238 0 0 chr2 62577550 62577613 -190678970 - Tigger5 DNA MER2_type -2260 63 1 228 122 0 0 chr2 62577618 62577659 -190678924 + (CA)n Simple_repeat Simple_repeat 2 42 0 1165 256 116 78 chr2 62577722 62578539 -190678044 + L1ME3A LINE L1 5318 6165 -5 254 325 58 17 chr2 62578645 62578765 -190677818 - LTR33 LTR ERVL 0 521 397 1879 202 79 62 chr2 62578991 62579461 -190677122 - MLT2B3 LTR ERVL 0 554 77 2015 104 0 11 chr2 62579589 62579868 -190676715 + AluSg SINE Alu 1 276 -34 222 62 0 0 chr2 62579871 62579903 -190676680 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 400 94 62 0 chr2 62579903 62579967 -190676616 - MLT2B3 LTR ERVL -486 68 1 * 517 313 55 0 chr2 62579967 62580124 -190676459 - LTR33 LTR ERVL -343 178 13 326 301 119 14 chr2 62580128 62580271 -190676312 + HAL1 LINE L1 2004 2161 -346 4981 177 26 5 chr2 62580494 62581583 -190675000 + L1PA16 LINE L1 5041 6150 -16 518 191 9 38 chr2 62581846 62581951 -190674632 - MIR SINE MIR -73 135 34 391 291 44 122 chr2 62582477 62582954 -190673629 + L1ME LINE L1 2150 2589 -3557 369 306 73 47 chr2 62582970 62583271 -190673312 + L1ME LINE L1 2736 3044 -3102 350 305 71 46 chr2 62583388 62583585 -190672998 + L1ME LINE L1 5481 5682 -439 372 43 0 0 chr2 62584482 62584528 -190672055 + (CA)n Simple_repeat Simple_repeat 2 47 0 236 146 0 21 chr2 62587281 62587329 -190669254 + (CA)n Simple_repeat Simple_repeat 2 48 0 659 245 60 49 chr2 62587857 62588196 -190668387 + MLT1H1 LTR MaLR 32 383 -207 287 274 0 74 chr2 62588689 62588784 -190667799 - MIR SINE MIR -147 115 28 253 232 52 62 chr2 62588846 62588970 -190667613 + MIR SINE MIR 59 145 -63 480 283 11 11 chr2 62591333 62591510 -190665073 - MARNA DNA Mariner -170 416 240 180 111 0 0 chr2 62591951 62591978 -190664605 + (CA)n Simple_repeat Simple_repeat 1 27 0 459 327 64 42 chr2 62593229 62593559 -190663024 + L2 LINE L2 2073 2409 -905 1985 146 8 38 chr2 62593569 62593939 -190662644 + MLT1A1 LTR MaLR 1 359 -6 749 299 102 37 chr2 62593960 62594578 -190662005 + L2 LINE L2 2448 3102 -170 219 88 0 0 chr2 62594748 62594782 -190661801 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 206 283 7 112 chr2 62594837 62594989 -190661594 - L2 LINE L2 -624 2690 2555 1519 160 18 95 chr2 62595067 62595404 -190661179 - AluJb SINE Alu -1 311 1 25 83 0 0 chr2 62595997 62596057 -190660526 + AT_rich Low_complexity Low_complexity 1 60 0 2432 91 3 0 chr2 62598636 62598944 -190657639 - AluSc SINE Alu 0 309 1 588 219 51 45 chr2 62599687 62599865 -190656718 - MLT1B LTR MaLR -166 224 46 * 671 221 20 0 chr2 62599842 62599991 -190656592 - MLT1B LTR MaLR -238 152 1 618 51 0 0 chr2 62600067 62600146 -190656437 - MADE1 DNA Mariner -1 79 1 1974 140 0 3 chr2 62600248 62600554 -190656029 - AluSx SINE Alu 0 305 1 182 153 0 194 chr2 62600630 62600702 -190655881 - MIR SINE MIR -60 148 91 262 234 16 0 chr2 62602005 62602069 -190654514 + L2 LINE L2 3248 3312 -1 2229 243 63 23 chr2 62602885 62604087 -190652496 - L1ME2 LINE L1 -9 6155 4906 1584 206 61 32 chr2 62604115 62605372 -190651211 - L1MD1 LINE L1 -15 6227 4848 1202 239 9 37 chr2 62605391 62605718 -190650865 + L1M4 LINE L1 18 335 -6207 443 306 42 67 chr2 62605909 62606193 -190650390 + L2 LINE L2 2134 2410 -904 635 329 54 46 chr2 62606266 62606676 -190649907 + L2 LINE L2 2893 3305 -8 283 238 79 10 chr2 62606701 62606802 -190649781 - MLT1L LTR MaLR -313 302 195 205 286 11 55 chr2 62606927 62607018 -190649565 + L2 LINE L2 2984 3070 -243 492 293 151 15 chr2 62607084 62607343 -190649240 + L2 LINE L2 2940 3233 -80 2330 152 30 53 chr2 62607862 62608297 -190648286 + MSTB LTR MaLR 1 425 -1 616 53 0 0 chr2 62608708 62608830 -190647753 - AluY SINE Alu 0 330 209 189 171 0 0 chr2 62609189 62609224 -190647359 + GA-rich Low_complexity Low_complexity 3 37 0 186 195 24 0 chr2 62610163 62610204 -190646379 + L2 LINE L2 3267 3308 -5 2379 109 0 0 chr2 62610543 62610855 -190645728 + AluSx SINE Alu 1 312 0 375 23 0 0 chr2 62610858 62610902 -190645681 + (TA)n Simple_repeat Simple_repeat 2 45 0 697 209 11 57 chr2 62612335 62612512 -190644071 + MIR SINE MIR 51 219 -43 22 35 0 0 chr2 62612721 62612750 -190643833 + AT_rich Low_complexity Low_complexity 1 29 0 613 233 133 73 chr2 62612768 62613270 -190643313 + MLT1H1 LTR MaLR 18 538 -4 355 286 59 0 chr2 62613278 62613397 -190643186 + MIR SINE MIR 56 181 -81 385 168 19 9 chr2 62614812 62614919 -190641664 + GA-rich Low_complexity Low_complexity 3 110 0 596 303 25 1 chr2 62615130 62615442 -190641141 - LTR16C LTR ERVL -57 434 71 207 231 15 15 chr2 62616361 62616426 -190640157 + (TGAA)n Simple_repeat Simple_repeat 4 68 0 21 0 0 0 chr2 62617393 62617414 -190639169 + AT_rich Low_complexity Low_complexity 1 21 0 1086 232 17 27 chr2 62617734 62618031 -190638552 - MLT1H LTR MaLR -198 351 58 2096 119 7 0 chr2 62618137 62618430 -190638153 + AluSx SINE Alu 1 295 -17 333 47 0 0 chr2 62618863 62618906 -190637677 + (T)n Simple_repeat Simple_repeat 1 43 0 205 207 0 52 chr2 62619212 62619270 -190637313 + (CA)n Simple_repeat Simple_repeat 2 56 0 1794 177 0 7 chr2 62620691 62620996 -190635587 + AluJb SINE Alu 9 311 -1 13416 28 0 0 chr2 62621764 62623460 -190633123 - L1PA2 LINE L1 -2777 3369 1674 16968 29 0 1 chr2 62623460 62626288 -190630295 + L1PA2 LINE L1 3376 6202 0 219 345 48 0 chr2 62626732 62626816 -190629767 + MIR SINE MIR 175 262 0 244 200 36 18 chr2 62626882 62626937 -190629646 + L2 LINE L2 3184 3239 -33 233 250 33 0 chr2 62627390 62627450 -190629133 + MIR SINE MIR 121 182 -80 2089 121 0 3 chr2 62627462 62627752 -190628831 + AluSx SINE Alu 1 289 -23 1266 207 109 45 chr2 62627756 62628225 -190628358 + MLT1D LTR MaLR 7 505 0 24 32 0 0 chr2 62629154 62629185 -190627398 + AT_rich Low_complexity Low_complexity 1 31 0 388 343 133 17 chr2 62630328 62630561 -190626022 - MIR SINE MIR -2 260 1 346 292 29 7 chr2 62631677 62631814 -190624769 + LTR33 LTR ERVL 100 239 -282 970 247 80 31 chr2 62631840 62632240 -190624343 - MLT1C LTR MaLR 0 467 45 422 122 0 14 chr2 62632913 62632987 -190623596 - MADE1 DNA Mariner -2 78 6 180 0 0 0 chr2 62633758 62633778 -190622805 + (TTCA)n Simple_repeat Simple_repeat 4 23 0 207 279 0 44 chr2 62633957 62634025 -190622558 + (TATATG)n Simple_repeat Simple_repeat 5 69 0 23 0 0 0 chr2 62634113 62634136 -190622447 + AT_rich Low_complexity Low_complexity 1 23 0 243 61 0 0 chr2 62634755 62634788 -190621795 + (TG)n Simple_repeat Simple_repeat 1 33 0 194 294 47 24 chr2 62636789 62636874 -190619709 - L2 LINE L2 -454 2860 2774 194 272 0 12 chr2 62638023 62638104 -190618479 + GA-rich Low_complexity Low_complexity 1 80 0 520 174 16 8 chr2 62638127 62638248 -190618335 + GA-rich Low_complexity Low_complexity 4 125 0 181 298 0 0 chr2 62639167 62639214 -190617369 - MIR SINE MIR -42 220 174 567 158 79 0 chr2 62640083 62640184 -190616399 + FLAM_C SINE Alu 1 109 -34 1953 151 3 3 chr2 62641465 62641756 -190614827 + AluSx SINE Alu 1 291 -21 815 344 123 30 chr2 62641850 62642851 -190613732 - L2 LINE L2 0 3313 2220 223 325 24 24 chr2 62642859 62642942 -190613641 + L3 LINE CR1 595 677 -900 196 338 14 58 chr2 62643019 62643158 -190613425 + L3 LINE CR1 684 816 -761 399 75 0 0 chr2 62643227 62643283 -190613300 + AluSp SINE Alu 67 116 -187 303 319 21 7 chr2 62643327 62643468 -190613115 - MER103 DNA DNA -16 150 8 751 203 52 0 chr2 62643503 62643656 -190612927 - MLT1J2 LTR MaLR -289 161 1 245 415 52 0 chr2 62644585 62644720 -190611863 - MIR3 SINE MIR -23 185 44 326 278 33 11 chr2 62644893 62644983 -190611600 + MIR SINE MIR 171 262 0 456 271 158 25 chr2 62646635 62646838 -190609745 + LTR33 LTR ERVL 1 230 -291 496 123 4 7 chr2 62646881 62647116 -190609467 + AluY SINE Alu 1 295 -14 241 253 51 13 chr2 62647233 62647312 -190609271 + LTR33 LTR ERVL 440 521 0 2084 101 10 0 chr2 62647770 62648076 -190608507 + L1PA15 LINE L1 5849 6157 -8 22 0 0 0 chr2 62649057 62649079 -190607504 + AT_rich Low_complexity Low_complexity 1 22 0 2106 112 0 0 chr2 62649306 62649626 -190606957 + AluSg1 SINE Alu 4 323 0 420 283 176 24 chr2 62649768 62649973 -190606610 + MIR SINE MIR 10 245 -17 1776 105 4 0 chr2 62650788 62651027 -190605556 - AluSp SINE Alu -7 306 67 662 251 42 39 chr2 62651581 62651774 -190604809 - MIR SINE MIR -32 230 38 386 321 83 28 chr2 62651780 62651998 -190604585 + MIR SINE MIR 33 262 0 212 328 0 0 chr2 62655036 62655097 -190601486 + GA-rich Low_complexity Low_complexity 1 61 0 23 33 0 0 chr2 62656883 62656913 -190599670 + AT_rich Low_complexity Low_complexity 1 30 0 218 211 0 0 chr2 62657354 62657392 -190599191 + polypurine Low_complexity Low_complexity 1 38 0 204 67 0 0 chr2 62657511 62657541 -190599042 + (TTATA)n Simple_repeat Simple_repeat 5 34 0 21 36 0 0 chr2 62657555 62657583 -190599000 + AT_rich Low_complexity Low_complexity 1 28 0 222 163 47 0 chr2 62658186 62658229 -190598354 + MIR SINE MIR 93 137 -71 26 64 0 0 chr2 62658365 62658412 -190598171 + AT_rich Low_complexity Low_complexity 1 47 0 27 49 0 0 chr2 62658536 62658577 -190598006 + AT_rich Low_complexity Low_complexity 1 41 0 189 89 67 0 chr2 62659176 62659221 -190597362 + GA-rich Low_complexity Low_complexity 5 52 0 180 0 0 0 chr2 62659340 62659360 -190597223 + (TTATA)n Simple_repeat Simple_repeat 5 24 0 2982 161 0 10 chr2 62659714 62660216 -190596367 + LOR1a LTR ERV1 1 497 0 407 0 0 18 chr2 62660396 62660452 -190596131 + L1PA2 LINE L1 6099 6153 -2 388 296 125 35 chr2 62660456 62660767 -190595816 + L1ME3A LINE L1 5550 5888 -282 256 335 123 56 chr2 62661086 62661549 -190595034 - L2 LINE L2 -1210 2104 1611 1335 259 111 15 chr2 62662573 62663081 -190593502 + MLT1E LTR MaLR 1 593 0 948 242 79 105 chr2 62663115 62663686 -190592897 - LTR67 LTR ERVL 0 557 2 1584 135 69 82 chr2 62665320 62665699 -190590884 - THE1C LTR MaLR -1 374 1 404 325 158 25 chr2 62665948 62666350 -190590233 - L2 LINE L2 -99 3214 2763 477 273 27 13 chr2 62666602 62666752 -190589831 - MIR SINE MIR -4 258 107 274 308 92 17 chr2 62666920 62667040 -190589543 + MIR3 SINE MIR 32 160 -48 423 157 67 11 chr2 62667040 62667129 -190589454 - MER53 DNA DNA -3 186 93 262 305 183 19 chr2 62667790 62668003 -190588580 + LTR43 LTR ERV1 211 458 -144 1711 149 55 0 chr2 62668088 62668343 -190588240 - AluJo SINE Alu -41 271 3 2406 227 102 23 chr2 62668414 62669189 -190587394 - L1ME2 LINE L1 0 6233 5398 351 213 62 38 chr2 62669186 62669326 -190587257 - L1ME2 LINE L1 -3143 3072 2926 * 3254 133 6 4 chr2 62669326 62669822 -190586761 + LOR1a LTR ERV1 1 497 0 351 213 62 38 chr2 62669822 62669841 -190586742 - L1ME2 LINE L1 -3289 2926 2909 841 254 19 0 chr2 62670059 62670315 -190586268 - L1ME2 LINE L1 -3320 2895 2635 27 29 0 0 chr2 62670370 62670404 -190586179 + AT_rich Low_complexity Low_complexity 1 34 0 367 241 6 31 chr2 62670419 62670581 -190586002 - L1ME2 LINE L1 -5269 1127 970 1049 306 84 42 chr2 62670917 62671735 -190584848 - L1ME2 LINE L1 -5508 888 36 243 343 78 0 chr2 62671863 62671965 -190584618 - L2 LINE L2 -16 3256 3147 3461 201 42 5 chr2 62672413 62673192 -190583391 - L1MB7 LINE L1 0 6682 5875 1796 184 7 7 chr2 62673225 62673529 -190583054 - AluJb SINE Alu -5 307 4 1518 247 44 19 chr2 62673552 62674071 -190582512 - L1MB7 LINE L1 -848 5796 5265 1613 138 167 6 chr2 62674107 62674419 -190582164 + THE1C LTR MaLR 14 375 0 9266 137 18 34 chr2 62674421 62676024 -190580559 + THE1C-int LTR MaLR 3 1580 0 1502 197 76 20 chr2 62676024 62676379 -190580204 + THE1C LTR MaLR 1 375 0 3260 233 65 17 chr2 62676379 62677368 -190579215 - L1MB7 LINE L1 -1375 5269 4234 1086 265 56 14 chr2 62677374 62677860 -190578723 + L1M4 LINE L1 3225 3730 -2416 526 255 64 0 chr2 62677864 62678099 -190578484 - L1MB7 LINE L1 -2812 3832 3583 4944 127 16 9 chr2 62678136 62679275 -190577308 - L1PA13 LINE L1 -2 6161 4902 2472 260 122 17 chr2 62679277 62680943 -190575640 - L1MB7 LINE L1 -3114 3530 1680 2190 119 22 38 chr2 62680943 62681313 -190575270 - THE1B LTR MaLR 0 364 1 11103 96 40 0 chr2 62681313 62682832 -190573751 - THE1B-int LTR MaLR 0 1580 2 2175 126 28 28 chr2 62682833 62683197 -190573386 - THE1B LTR MaLR 0 364 1 1900 144 71 11 chr2 62683208 62683562 -190573021 - THE1C LTR MaLR 0 375 1 5220 243 30 35 chr2 62683563 62685246 -190571337 - L1MB7 LINE L1 -4875 1667 16 336 348 61 18 chr2 62687381 62687545 -190569038 - MIR3 SINE MIR -3 205 35 296 289 77 98 chr2 62687745 62687939 -190568644 + MLT1L LTR MaLR 201 390 -225 207 0 0 0 chr2 62688838 62688861 -190567722 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1925 172 7 0 chr2 62688923 62689231 -190567352 + AluJb SINE Alu 1 310 -2 548 277 0 7 chr2 62690663 62690804 -190565779 - MIR3 SINE MIR -15 193 54 479 238 329 6 chr2 62692275 62692439 -190564144 + MIR SINE MIR 2 218 -44 464 332 81 27 chr2 62692565 62692788 -190563795 + MIR SINE MIR 14 248 -14 212 86 29 0 chr2 62692886 62692921 -190563662 + (TCCA)n Simple_repeat Simple_repeat 2 37 0 235 250 68 45 chr2 62693798 62693886 -190562697 - MIR SINE MIR -109 153 64 592 271 80 29 chr2 62695599 62696141 -190560442 + L1ME3A LINE L1 1488 2108 -4474 401 304 64 42 chr2 62696176 62696459 -190560124 + L1ME3A LINE L1 2200 2488 -4233 1118 264 100 17 chr2 62696461 62696980 -190559603 + L1ME3A LINE L1 5967 6528 -36 200 143 36 36 chr2 62698339 62698395 -190558188 + (TCTA)n Simple_repeat Simple_repeat 2 57 0 5338 134 27 13 chr2 62698521 62699469 -190557114 - L1PA16 LINE L1 -12 6154 5193 1031 337 45 35 chr2 62699541 62700052 -190556531 - L3 LINE CR1 -1 1576 1061 392 333 26 39 chr2 62702826 62703200 -190553383 - L1MC4a LINE L1 -508 5658 5512 225 281 70 18 chr2 62703715 62703886 -190552697 - L1MC4a LINE L1 -2194 3952 3773 1338 279 122 36 chr2 62704189 62704992 -190551591 - L1ME3A LINE L1 0 6406 5535 268 273 65 39 chr2 62704998 62705157 -190551426 - L1ME3A LINE L1 -1131 5251 5089 5602 31 1 0 chr2 62705160 62705836 -190550747 - L1PA4 LINE L1 -984 5162 4486 7482 33 1 0 chr2 62705836 62706826 -190549757 + L1PA4 LINE L1 5162 6152 -3 2871 275 73 63 chr2 62706849 62708266 -190548317 - L1MEc LINE L1 -1307 5075 3674 1838 119 8 0 chr2 62708266 62708517 -190548066 - AluSx SINE Alu -20 292 40 2871 275 73 63 chr2 62708517 62709990 -190546593 - L1MEc LINE L1 -2708 3674 2200 373 297 140 12 chr2 62710247 62710883 -190545700 - L1MEc LINE L1 -4512 1870 1047 43 20 0 0 chr2 62711094 62711144 -190545439 + AT_rich Low_complexity Low_complexity 1 50 0 1385 178 63 53 chr2 62711305 62711608 -190544975 - AluJo SINE Alu -2 310 5 2550 245 58 48 chr2 62711620 62712402 -190544181 - L1MCa LINE L1 -2985 3441 2669 1749 144 202 17 chr2 62712402 62712763 -190543820 + MSTA LTR MaLR 1 428 0 2550 245 58 48 chr2 62712763 62713626 -190542957 - L1MCa LINE L1 -3757 2669 1720 * 2911 245 57 49 chr2 62713622 62714038 -190542545 + L1M4 LINE L1 1 412 -6130 273 29 0 0 chr2 62714038 62714072 -190542511 + (TTA)n Simple_repeat Simple_repeat 3 36 0 2911 245 57 49 chr2 62714072 62714679 -190541904 + L1M4 LINE L1 412 1032 -5510 614 159 0 0 chr2 62714695 62714783 -190541800 + U6 snRNA snRNA 1 88 -19 435 194 0 0 chr2 62714802 62714895 -190541688 + L1MA9 LINE L1 6198 6290 -22 37 23 0 0 chr2 62714895 62714939 -190541644 + AT_rich Low_complexity Low_complexity 1 44 0 743 183 10 46 chr2 62714940 62715128 -190541455 + L1M4 LINE L1 1061 1243 -5299 7561 24 3 2 chr2 62715128 62716022 -190540561 + L1PA3 LINE L1 5259 6153 -2 24 0 0 0 chr2 62716300 62716324 -190540259 + AT_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr2 62716350 62716385 -190540198 + AT_rich Low_complexity Low_complexity 1 35 0 1438 191 107 14 chr2 62719081 62719436 -190537147 + MLT1B LTR MaLR 1 388 -2 21 36 0 0 chr2 62719996 62720024 -190536559 + AT_rich Low_complexity Low_complexity 1 28 0 738 363 124 0 chr2 62721397 62721832 -190534751 + L3 LINE CR1 1088 1576 -1 288 0 0 0 chr2 62723076 62723108 -190533475 + (TG)n Simple_repeat Simple_repeat 2 33 0 972 65 0 8 chr2 62723190 62723337 -190533246 + AluY SINE Alu 160 305 0 1483 226 19 25 chr2 62723919 62724286 -190532297 - MLT1A1 LTR MaLR 0 365 1 21 0 0 0 chr2 62725235 62725256 -190531327 + AT_rich Low_complexity Low_complexity 1 21 0 1396 202 95 0 chr2 62725362 62725615 -190530968 + AluJo SINE Alu 6 282 -30 183 42 0 0 chr2 62725621 62725645 -190530938 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 654 219 70 74 chr2 62728193 62728408 -190528175 - MER20 DNA MER1_type -4 215 2 261 327 56 37 chr2 62728411 62728518 -190528065 + L2 LINE L2 3150 3258 -14 483 18 0 0 chr2 62730066 62730122 -190526461 + (CA)n Simple_repeat Simple_repeat 2 57 0 333 0 0 0 chr2 62731781 62731818 -190524765 + (CA)n Simple_repeat Simple_repeat 2 38 0 195 42 0 0 chr2 62731871 62731895 -190524688 + (A)n Simple_repeat Simple_repeat 1 24 0 315 71 0 0 chr2 62733055 62733097 -190523486 + (TG)n Simple_repeat Simple_repeat 1 42 0 318 169 0 0 chr2 62733097 62733162 -190523421 + GA-rich Low_complexity Low_complexity 2 66 0 1584 174 20 87 chr2 62733892 62734283 -190522300 - MLT1B LTR MaLR -3 387 23 232 377 81 2 chr2 62734509 62734650 -190521933 - MIR3 SINE MIR -74 134 3 219 331 73 15 chr2 62739137 62739273 -190517310 - L2 LINE L2 -615 2699 2556 263 285 42 56 chr2 62739512 62739656 -190516927 - MER117 DNA MER1_type -26 171 30 291 28 0 0 chr2 62739657 62739693 -190516890 + (CA)n Simple_repeat Simple_repeat 2 37 0 742 292 89 10 chr2 62740037 62740328 -190516255 + L3b LINE CR1 1114 1427 -156 225 132 0 0 chr2 62740897 62740935 -190515648 + (TTG)n Simple_repeat Simple_repeat 1 38 0 181 239 22 0 chr2 62741112 62741158 -190515425 + L2 LINE L2 3265 3311 -2 1194 236 8 8 chr2 62741521 62741762 -190514821 + MIR SINE MIR 10 250 -12 1096 84 0 0 chr2 62741781 62741950 -190514633 + AluSg/x SINE Alu 167 335 0 22 35 0 0 chr2 62742886 62742915 -190513668 + AT_rich Low_complexity Low_complexity 1 29 0 197 98 24 0 chr2 62744140 62744181 -190512402 + (CAAAAA)n Simple_repeat Simple_repeat 4 45 0 539 319 71 9 chr2 62744478 62744704 -190511879 - MIR SINE MIR -12 250 11 21 36 0 0 chr2 62744995 62745023 -190511560 + AT_rich Low_complexity Low_complexity 1 28 0 239 183 98 61 chr2 62745210 62745292 -190511291 - L1M4 LINE L1 -1057 5089 5005 279 231 22 22 chr2 62745294 62745385 -190511198 - L1M4 LINE L1 -1194 4952 4862 887 200 0 0 chr2 62745419 62745584 -190510999 + AluSg/x SINE Alu 141 305 -5 765 247 72 21 chr2 62745621 62745953 -190510630 - L1M4 LINE L1 -1453 4693 4345 1694 277 102 21 chr2 62746135 62746523 -190510060 - L1M4 LINE L1 -1857 4289 3934 4636 118 16 23 chr2 62746523 62747113 -190509470 - L1PB3 LINE L1 -2 6152 5567 2228 110 3 3 chr2 62747113 62747422 -190509161 - AluSx SINE Alu -3 309 1 4636 118 16 23 chr2 62747422 62747578 -190509005 - L1PB3 LINE L1 -587 5567 5411 1694 277 102 21 chr2 62747578 62747997 -190508586 - L1M4 LINE L1 -2212 3934 3417 432 286 31 66 chr2 62748549 62748776 -190507807 - L1ME1 LINE L1 -3 6163 5945 429 174 18 9 chr2 62748799 62748908 -190507675 + (TA)n Simple_repeat Simple_repeat 2 111 0 409 207 138 0 chr2 62748955 62749071 -190507512 - L1ME1 LINE L1 -295 5871 5740 * 926 225 69 103 chr2 62749068 62749504 -190507079 - L1ME1 LINE L1 -947 5199 4779 552 209 6 98 chr2 62749504 62749627 -190506956 + MER58B DNA MER1_type 1 107 -2313 5323 44 0 0 chr2 62749627 62750264 -190506319 - L1PA5 LINE L1 -2 6152 5516 552 209 6 98 chr2 62750264 62750303 -190506280 + MER58B DNA MER1_type 107 148 -2272 963 188 0 46 chr2 62750372 62750569 -190506014 + MER58B DNA MER1_type 154 341 0 1358 233 21 6 chr2 62750575 62750905 -190505678 - L1ME1 LINE L1 -1366 4780 4446 538 237 17 40 chr2 62752485 62752658 -190503925 + L2 LINE L2 2550 2718 -596 405 319 32 43 chr2 62752718 62752906 -190503677 + LTR67 LTR ERVL 4 189 -368 290 297 0 0 chr2 62753145 62753209 -190503374 + MER115 DNA AcHobo 2 65 -628 287 227 27 0 chr2 62753634 62753709 -190502874 + LTR67 LTR ERVL 481 557 0 1076 290 105 11 chr2 62753819 62754284 -190502299 - L2 LINE L2 0 3313 2805 8022 47 10 0 chr2 62754308 62756086 -190500497 + L1PA5 LINE L1 4359 6152 -2 3224 66 0 2 chr2 62756086 62756509 -190500074 + L1PA7 LINE L1 5733 6154 0 180 111 0 0 chr2 62756516 62756543 -190500040 + (A)n Simple_repeat Simple_repeat 1 27 0 1601 185 85 46 chr2 62756557 62756947 -190499636 + MSTC LTR MaLR 1 405 -23 334 275 58 53 chr2 62757093 62757264 -190499319 + MIR SINE MIR 31 202 -60 180 386 0 0 chr2 62757305 62757362 -190499221 - MIR SINE MIR -76 132 76 21 0 0 0 chr2 62757575 62757596 -190498987 + AT_rich Low_complexity Low_complexity 1 21 0 516 256 95 7 chr2 62757689 62757826 -190498757 - MIR SINE MIR -49 213 65 232 325 24 0 chr2 62759762 62759845 -190496738 - L2 LINE L2 -1 3312 3228 206 235 0 20 chr2 62760160 62760211 -190496372 + CT-rich Low_complexity Low_complexity 3 52 0 22 35 0 0 chr2 62760211 62760240 -190496343 + AT_rich Low_complexity Low_complexity 1 29 0 31 0 0 0 chr2 62760816 62760847 -190495736 + AT_rich Low_complexity Low_complexity 1 31 0 412 270 90 48 chr2 62760892 62761081 -190495502 - L2 LINE L2 0 3313 3117 1204 298 33 51 chr2 62761088 62761661 -190494922 - MLT1G LTR MaLR 0 590 28 231 259 0 0 chr2 62761699 62761757 -190494826 + L1ME LINE L1 1596 1653 -4773 537 200 0 0 chr2 62761836 62761926 -190494657 + 5S rRNA rRNA 1 90 -31 810 87 8 24 chr2 62762159 62762286 -190494297 - L1PB1 LINE L1 -2 6149 6025 21 57 0 0 chr2 62762321 62762356 -190494227 + AT_rich Low_complexity Low_complexity 1 35 0 307 325 84 11 chr2 62762581 62762772 -190493811 + L1ME LINE L1 2490 2694 -3732 1327 213 100 3 chr2 62762933 62763224 -190493359 - MLT1E3 LTR MaLR -5 619 301 423 256 99 0 chr2 62763257 62763378 -190493205 - MLT1E3 LTR MaLR -521 133 1 1106 146 0 0 chr2 62763839 62763997 -190492586 + AluSg/x SINE Alu 132 289 -23 340 267 116 32 chr2 62764089 62764366 -190492217 + L1ME LINE L1 3624 3923 -2503 6933 113 40 4 chr2 62764407 62765793 -190490790 - L1MA1 LINE L1 0 6302 4887 4091 163 255 5 chr2 62765805 62767344 -190489239 - L1 LINE L1 -3112 4453 2529 * 17759 167 35 11 chr2 62767341 62770489 -190486094 - L1M1 LINE L1 -4332 3233 9 25 51 0 0 chr2 62770565 62770604 -190485979 + AT_rich Low_complexity Low_complexity 1 39 0 2077 137 39 25 chr2 62770613 62770972 -190485611 - THE1C LTR MaLR -11 364 1 9476 126 34 35 chr2 62770972 62772555 -190484028 - THE1C-int LTR MaLR 0 1580 1 2038 144 24 27 chr2 62772555 62772931 -190483652 - THE1C LTR MaLR 0 375 1 259 287 125 37 chr2 62772994 62773322 -190483261 + L1ME LINE L1 4108 4464 -1962 4332 158 23 8 chr2 62773331 62774077 -190482506 + Tigger2 DNA MER2_type 1 757 -1961 1237 147 65 12 chr2 62774130 62774375 -190482208 + Tigger2 DNA MER2_type 2461 2718 0 558 272 43 18 chr2 62774556 62774835 -190481748 + L1ME LINE L1 4701 4986 -1440 666 309 26 35 chr2 62774891 62774982 -190481601 - MIR SINE MIR -14 248 158 1621 152 72 72 chr2 62774982 62775343 -190481240 + MLT1A1 LTR MaLR 5 365 0 666 309 26 35 chr2 62775343 62775481 -190481102 - MIR SINE MIR -104 158 21 412 299 60 18 chr2 62775662 62775716 -190480867 + L1ME LINE L1 5223 5273 -1153 1728 159 39 31 chr2 62775716 62776074 -190480509 + MER46B DNA MER2_type 1 236 0 412 299 60 18 chr2 62776074 62776400 -190480183 + L1ME LINE L1 5273 5619 -807 415 173 0 37 chr2 62776755 62776836 -190479747 + Tigger2 DNA MER2_type 1 78 -2640 * 2779 156 13 5 chr2 62776808 62777256 -190479327 + Tigger2 DNA MER2_type 2267 2718 0 250 244 35 52 chr2 62777468 62777583 -190479000 + L1MC4 LINE L1 7926 8038 -4 273 119 0 0 chr2 62777604 62777646 -190478937 + (TA)n Simple_repeat Simple_repeat 1 42 0 348 323 49 30 chr2 62778012 62778176 -190478407 - L2 LINE L2 -43 3270 3104 372 269 137 46 chr2 62778558 62778777 -190477806 + L2 LINE L2 3075 3313 0 205 314 133 38 chr2 62779791 62779896 -190476687 + MER5A DNA MER1_type 3 117 -72 1040 219 45 0 chr2 62780207 62780408 -190476175 - MER58A DNA MER1_type -14 210 1 270 297 0 0 chr2 62781318 62781382 -190475201 - L2 LINE L2 0 3313 3250 1914 292 111 15 chr2 62781639 62782389 -190474194 + L2 LINE L2 1806 2627 -687 22 0 0 0 chr2 62782666 62782688 -190473895 + AT_rich Low_complexity Low_complexity 1 22 0 263 315 22 22 chr2 62783046 62783135 -190473448 - MER5A DNA MER1_type -99 90 2 2081 135 24 0 chr2 62783492 62783788 -190472795 - AluSx SINE Alu -9 303 1 511 285 31 31 chr2 62784419 62784612 -190471971 + LTR16C LTR ERVL 298 490 -1 601 338 67 13 chr2 62784612 62784837 -190471746 + MIR SINE MIR 25 261 -1 372 271 42 42 chr2 62784860 62785026 -190471557 + L1ME LINE L1 5703 5868 -578 1984 160 32 12 chr2 62785160 62785276 -190471307 - MLT1B LTR MaLR -40 350 238 3953 126 23 29 chr2 62785276 62785933 -190470650 + MER39B LTR ERV1 1 653 0 1984 160 32 12 chr2 62785933 62786159 -190470424 - MLT1B LTR MaLR -152 238 1 267 103 0 0 chr2 62787539 62787578 -190469005 + (GA)n Simple_repeat Simple_repeat 2 40 0 259 333 29 22 chr2 62789462 62789600 -190466983 - MIR3 SINE MIR -1 207 69 425 348 106 50 chr2 62789609 62790525 -190466058 - L2 LINE L2 -2 3270 2307 265 321 25 0 chr2 62791029 62791110 -190465473 + MIR3 SINE MIR 120 202 -6 200 151 0 19 chr2 62791741 62791794 -190464789 + (CA)n Simple_repeat Simple_repeat 1 52 0 205 331 139 12 chr2 62794638 62794804 -190461779 + MIR3 SINE MIR 22 208 0 1450 181 19 9 chr2 62796282 62796597 -190459986 - MER33 DNA MER1_type -6 318 1 263 379 16 16 chr2 62797516 62797640 -190458943 + MIR SINE MIR 20 143 -119 21 0 0 0 chr2 62797805 62797826 -190458757 + AT_rich Low_complexity Low_complexity 1 21 0 242 185 31 0 chr2 62798197 62798262 -190458321 + (CATA)n Simple_repeat Simple_repeat 2 68 0 209 222 0 0 chr2 62798763 62798808 -190457775 + A-rich Low_complexity Low_complexity 1 45 0 244 311 67 25 chr2 62799210 62799329 -190457254 + MIR3 SINE MIR 64 187 -21 448 291 87 25 chr2 62799365 62799580 -190457003 - MIR SINE MIR -40 168 2 264 30 0 0 chr2 62803016 62803049 -190453534 + (TCTA)n Simple_repeat Simple_repeat 1 33 0 356 189 0 33 chr2 62803086 62803176 -190453407 + (CATATA)n Simple_repeat Simple_repeat 2 88 0 262 290 0 14 chr2 62803177 62803315 -190453268 + (TA)n Simple_repeat Simple_repeat 2 137 0 381 302 0 40 chr2 62803792 62803941 -190452642 - L2 LINE L2 -211 3061 2919 252 276 138 46 chr2 62804163 62804337 -190452246 - MIR SINE MIR -65 197 8 1442 173 42 6 chr2 62804714 62805027 -190451556 - MER33 DNA MER1_type 0 324 1 953 200 79 83 chr2 62805093 62805383 -190451200 - MSTD LTR MaLR 0 396 108 509 306 59 6 chr2 62807341 62807558 -190449025 - MIR SINE MIR -10 252 14 225 65 0 0 chr2 62807790 62807821 -190448762 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 242 217 0 0 chr2 62808161 62808207 -190448376 + L2 LINE L2 3267 3312 -1 180 77 0 0 chr2 62808450 62808476 -190448107 + (TG)n Simple_repeat Simple_repeat 2 27 0 252 288 17 0 chr2 62808595 62808654 -190447929 + L2 LINE L2 3232 3291 -22 298 326 43 36 chr2 62809124 62809262 -190447321 - L2 LINE L2 0 3272 3134 583 257 64 16 chr2 62809598 62809785 -190446798 + L2 LINE L2 3118 3313 0 734 217 101 5 chr2 62812469 62812658 -190443925 - MIR SINE MIR -3 259 53 463 223 35 2 chr2 62814967 62815100 -190441483 + L1ME1 LINE L1 5958 6092 -70 243 0 0 0 chr2 62815220 62815247 -190441336 + (A)n Simple_repeat Simple_repeat 1 27 0 210 377 47 9 chr2 62816199 62816305 -190440278 - MIR SINE MIR -79 129 20 205 367 0 13 chr2 62816471 62816550 -190440033 - L2 LINE L2 -84 3188 3111 399 21 0 0 chr2 62816738 62816786 -190439797 + (TG)n Simple_repeat Simple_repeat 2 49 0 217 303 49 79 chr2 62817174 62817354 -190439229 - MIR SINE MIR -62 146 16 250 255 0 0 chr2 62818198 62818249 -190438334 + (TATATG)n Simple_repeat Simple_repeat 3 53 0 2182 102 0 3 chr2 62818467 62818807 -190437776 - AluSx SINE Alu 0 339 1 865 184 36 5 chr2 62819711 62819907 -190436676 + L1MB4 LINE L1 5975 6176 -4 480 91 34 11 chr2 62823867 62823955 -190432628 + CT-rich Low_complexity Low_complexity 4 93 0 278 81 0 0 chr2 62823955 62823992 -190432591 + (TC)n Simple_repeat Simple_repeat 1 37 0 1848 168 14 3 chr2 62823992 62824278 -190432305 - AluSx SINE Alu -23 289 1 210 397 38 30 chr2 62826545 62826782 -190429801 + L2 LINE L2 2826 3064 -208 396 103 0 0 chr2 62827217 62827275 -190429308 + (TCTA)n Simple_repeat Simple_repeat 3 60 0 2247 111 7 3 chr2 62827897 62828204 -190428379 - AluSx SINE Alu -2 310 3 186 237 0 0 chr2 62828352 62828390 -190428193 - MIR SINE MIR -9 253 216 204 277 0 0 chr2 62828505 62828552 -190428031 + G-rich Low_complexity Low_complexity 5 51 0 240 236 38 28 chr2 62828834 62828940 -190427643 + MER103 DNA DNA 53 159 -7 322 304 124 32 chr2 62830159 62830531 -190426052 + LTR16A LTR ERVL 23 428 -22 201 39 0 0 chr2 62830531 62830557 -190426026 + (A)n Simple_repeat Simple_repeat 1 26 0 2503 65 3 0 chr2 62831836 62832143 -190424440 + AluY SINE Alu 1 308 -3 493 71 0 0 chr2 62832160 62832230 -190424353 + Alu SINE Alu 235 304 -8 200 59 29 0 chr2 62832502 62832536 -190424047 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 571 363 78 28 chr2 62832656 62833232 -190423351 - L1M4 LINE L1 -2213 3933 3329 1642 176 9 26 chr2 62833244 62833585 -190422998 - L1MB1 LINE L1 -1 6167 5833 706 328 43 69 chr2 62833632 62834300 -190422283 - L1M4 LINE L1 -3279 2867 2217 208 231 0 19 chr2 62834300 62834352 -190422231 + (CAT)n Simple_repeat Simple_repeat 2 52 0 213 231 0 0 chr2 62834469 62834521 -190422062 + T-rich Low_complexity Low_complexity 1 52 0 237 336 18 9 chr2 62835003 62835116 -190421467 - HAL1 LINE L1 -942 1565 1452 255 289 16 76 chr2 62835295 62835610 -190420973 - HAL1 LINE L1 -1244 1263 968 1638 173 4 22 chr2 62835640 62835918 -190420665 - AluJb SINE Alu -39 273 1 408 281 67 34 chr2 62836142 62836320 -190420263 + MER5A DNA MER1_type 4 187 -2 240 35 0 0 chr2 62836433 62836462 -190420121 + (CA)n Simple_repeat Simple_repeat 2 30 0 332 294 105 7 chr2 62836520 62836663 -190419920 - MIR SINE MIR -58 204 48 1983 201 36 40 chr2 62836673 62837175 -190419408 + MLT1D LTR MaLR 3 502 -3 918 291 46 28 chr2 62837185 62837577 -190419006 + MLT1I LTR MaLR 11 409 0 41 0 0 0 chr2 62839489 62839530 -190417053 + AT_rich Low_complexity Low_complexity 1 41 0 186 246 0 0 chr2 62839634 62839695 -190416888 + (TA)n Simple_repeat Simple_repeat 1 61 0 512 308 64 20 chr2 62839721 62840111 -190416472 - L1ME4a LINE L1 -215 5906 5500 577 316 119 46 chr2 62840254 62841078 -190415505 - L1ME4a LINE L1 -805 5341 4458 515 318 50 5 chr2 62841191 62841389 -190415194 + MIR SINE MIR 49 255 -7 301 306 45 35 chr2 62842679 62842878 -190413705 + L2 LINE L2 2694 2894 -420 387 0 0 0 chr2 62843068 62843111 -190413472 + (CA)n Simple_repeat Simple_repeat 2 44 0 230 434 0 0 chr2 62843215 62843337 -190413246 + MER5A DNA MER1_type 63 184 -5 394 318 0 0 chr2 62843655 62843762 -190412821 + MIR3 SINE MIR 73 179 -29 372 22 0 0 chr2 62844127 62844172 -190412411 + (CA)n Simple_repeat Simple_repeat 1 45 0 309 100 0 0 chr2 62846115 62846165 -190410418 + (TG)n Simple_repeat Simple_repeat 2 51 0 387 0 0 0 chr2 62848788 62848831 -190407752 + (TA)n Simple_repeat Simple_repeat 2 44 0 339 248 38 67 chr2 62849376 62849481 -190407102 + L2 LINE L2 3169 3270 -2 378 0 0 0 chr2 62849640 62849682 -190406901 + (TG)n Simple_repeat Simple_repeat 2 43 0 443 315 96 6 chr2 62850314 62850492 -190406091 - MIR SINE MIR -44 218 25 1993 115 7 28 chr2 62851142 62851260 -190405323 + AluSc SINE Alu 1 120 -192 180 0 0 0 chr2 62851260 62851280 -190405303 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1993 115 7 28 chr2 62851280 62851479 -190405104 + AluSc SINE Alu 120 312 0 302 132 53 0 chr2 62851576 62851652 -190404931 + (TGGA)n Simple_repeat Simple_repeat 3 82 0 382 204 14 63 chr2 62851834 62851976 -190404607 + L1ME4a LINE L1 5983 6117 -4 201 213 0 0 chr2 62852116 62852163 -190404420 + (TG)n Simple_repeat Simple_repeat 2 48 0 2280 109 3 0 chr2 62854940 62855244 -190401339 - AluSp SINE Alu -8 305 1 2245 116 7 3 chr2 62855307 62855608 -190400975 + AluSx SINE Alu 1 302 -10 1369 297 180 29 chr2 62855620 62856553 -190400030 - L2 LINE L2 -3 3310 2227 201 238 0 48 chr2 62856664 62856727 -190399856 + GA-rich Low_complexity Low_complexity 2 61 0 275 269 11 11 chr2 62858390 62858483 -190398100 + CT-rich Low_complexity Low_complexity 1 93 0 437 125 0 5 chr2 62859881 62859985 -190396598 + L1MA4 LINE L1 6200 6305 0 1160 285 57 42 chr2 62860585 62861058 -190395525 - L2 LINE L2 -20 3293 2814 2952 226 24 41 chr2 62861298 62862169 -190394414 + L1ME1 LINE L1 5307 6162 -4 22 0 0 0 chr2 62862223 62862245 -190394338 + AT_rich Low_complexity Low_complexity 1 22 0 349 327 152 5 chr2 62862839 62863056 -190393527 - MIR SINE MIR -12 250 2 494 164 261 15 chr2 62863850 62863984 -190392599 - MER58A DNA MER1_type -12 212 46 216 214 0 0 chr2 62864399 62864455 -190392128 + CT-rich Low_complexity Low_complexity 5 60 0 1797 206 113 14 chr2 62867184 62867797 -190388786 - L1MC4 LINE L1 0 7808 7126 454 266 80 21 chr2 62867797 62867985 -190388598 - MIR SINE MIR -30 232 34 219 254 0 0 chr2 62868218 62868277 -190388306 + T-rich Low_complexity Low_complexity 1 59 0 2025 129 14 0 chr2 62868372 62868659 -190387924 + AluSx SINE Alu 1 291 -21 2011 101 15 61 chr2 62868682 62869008 -190387575 + AluSx SINE Alu 1 311 -1 440 257 76 9 chr2 62869218 62869323 -190387260 + L2 LINE L2 3158 3269 -3 859 273 50 33 chr2 62869724 62870061 -190386522 - MLT1K LTR MaLR -105 483 141 192 77 0 0 chr2 62873641 62873667 -190382916 + (T)n Simple_repeat Simple_repeat 1 26 0 283 138 15 15 chr2 62873980 62874045 -190382538 + CT-rich Low_complexity Low_complexity 2 66 0 216 0 0 0 chr2 62874821 62874845 -190381738 + (A)n Simple_repeat Simple_repeat 1 24 0 2232 107 0 7 chr2 62875327 62875636 -190380947 + AluSc SINE Alu 1 307 -2 1353 126 37 0 chr2 62876026 62876241 -190380342 - MER30 DNA MER1_type -7 223 1 1226 172 40 96 chr2 62876988 62877167 -190379416 + MER58B DNA MER1_type 2 190 -2230 225 0 100 0 chr2 62877167 62877207 -190379376 + T-rich Low_complexity Low_complexity 2 45 0 2169 113 3 13 chr2 62877214 62877514 -190379069 - AluSq SINE Alu -16 297 1 1226 172 40 96 chr2 62877514 62877680 -190378903 + MER58B DNA MER1_type 196 335 -6 212 196 18 0 chr2 62878299 62878355 -190378228 + (TTTG)n Simple_repeat Simple_repeat 3 59 0 322 320 32 16 chr2 62878396 62878521 -190378062 + MIR SINE MIR 23 149 -113 209 323 32 43 chr2 62879164 62879257 -190377326 + MIR SINE MIR 23 114 -148 220 374 114 44 chr2 62879602 62879899 -190376684 + L2 LINE L2 2429 2746 -568 277 368 93 62 chr2 62880019 62880340 -190376243 + L2 LINE L2 2881 3211 -61 247 288 39 33 chr2 62880732 62880885 -190375698 + L1MC/D LINE L1 5712 5867 -254 181 293 120 0 chr2 62882026 62882101 -190374482 - MIR SINE MIR -116 146 63 222 330 80 18 chr2 62884104 62884216 -190372367 + MIR SINE MIR 72 190 -72 402 116 105 23 chr2 62884521 62884607 -190371976 - L1MA9 LINE L1 -1 6311 6219 793 168 56 0 chr2 62884619 62884762 -190371821 - Tigger3(Golem) DNA MER2_type -1 3028 2878 220 233 0 0 chr2 62885415 62885458 -190371125 - L2 LINE L2 -14 3258 3216 319 219 27 9 chr2 62885462 62885600 -190370983 - MER96 DNA MER1_type? 0 175 4 226 240 0 20 chr2 62888003 62888053 -190368530 + (TATG)n Simple_repeat Simple_repeat 2 50 0 315 0 0 0 chr2 62888054 62888089 -190368494 + (CA)n Simple_repeat Simple_repeat 2 36 0 287 288 130 14 chr2 62888302 62888448 -190368135 + MER103 DNA DNA 2 164 -2 206 269 19 0 chr2 62888659 62888711 -190367872 + L2 LINE L2 3261 3313 0 24 32 0 0 chr2 62889290 62889321 -190367262 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr2 62889590 62889611 -190366972 + AT_rich Low_complexity Low_complexity 1 21 0 217 333 63 24 chr2 62890076 62890202 -190366381 + L2 LINE L2 3141 3271 -1 777 224 6 0 chr2 62891177 62891342 -190365241 + L1MA10 LINE L1 6169 6334 0 22 35 0 0 chr2 62891836 62891865 -190364718 + AT_rich Low_complexity Low_complexity 1 29 0 189 256 0 0 chr2 62893581 62893624 -190362959 - MIR3 SINE MIR -15 193 151 22 0 0 0 chr2 62893645 62893667 -190362916 + AT_rich Low_complexity Low_complexity 1 22 0 218 312 121 57 chr2 62893751 62893908 -190362675 - MIR3 SINE MIR -29 179 13 271 317 19 0 chr2 62893989 62894093 -190362490 + (TAG)n Simple_repeat Simple_repeat 2 107 0 387 229 139 33 chr2 62894162 62894284 -190362299 - MIR SINE MIR -108 154 20 192 77 0 0 chr2 62895288 62895314 -190361269 + (GAA)n Simple_repeat Simple_repeat 2 27 0 208 158 0 26 chr2 62896791 62896829 -190359754 + GA-rich Low_complexity Low_complexity 4 40 0 8347 19 0 0 chr2 62898645 62899762 -190356821 - L1PA2 LINE L1 0 6155 5039 711 46 0 0 chr2 62899762 62899849 -190356734 + L1PA2 LINE L1 4939 5025 -1121 225 261 15 15 chr2 62900999 62901064 -190355519 + L2 LINE L2 3191 3255 -58 249 159 0 0 chr2 62901255 62901299 -190355284 + A-rich Low_complexity Low_complexity 1 44 0 394 339 85 0 chr2 62901842 62902031 -190354552 + MIR SINE MIR 25 229 -33 516 341 22 13 chr2 62902143 62902372 -190354211 + MIR SINE MIR 8 238 -24 303 291 0 23 chr2 62902373 62902459 -190354124 + CT-rich Low_complexity Low_complexity 6 89 0 263 216 0 31 chr2 62903840 62903937 -190352646 + CT-rich Low_complexity Low_complexity 4 97 0 606 293 41 37 chr2 62905818 62905989 -190350594 + MIR SINE MIR 9 183 -79 2968 9 0 0 chr2 62905989 62906307 -190350276 + AluYb8 SINE Alu 1 318 0 606 293 41 37 chr2 62906307 62906377 -190350206 + MIR SINE MIR 183 251 -11 2093 129 6 0 chr2 62906433 62906744 -190349839 + AluSp SINE Alu 1 313 0 616 27 0 0 chr2 62906770 62906844 -190349739 - L1PA2 LINE L1 -4 6151 6078 2677 98 25 3 chr2 62907030 62907386 -190349197 + THE1B LTR MaLR 1 364 0 357 292 71 24 chr2 62907391 62907559 -190349024 - L1ME LINE L1 -461 5660 5485 217 230 68 54 chr2 62908222 62908296 -190348287 - MER91C DNA MER1_type -35 105 31 1553 148 40 46 chr2 62908618 62908942 -190347641 - MER33 DNA MER1_type 0 324 3 21 0 0 0 chr2 62909651 62909672 -190346911 + AT_rich Low_complexity Low_complexity 1 21 0 969 130 106 48 chr2 62910560 62910767 -190345816 - MER20 DNA MER1_type 0 219 1 569 71 67 21 chr2 62911548 62911795 -190344788 + (TA)n Simple_repeat Simple_repeat 1 258 0 590 62 102 0 chr2 62911806 62912100 -190344483 + (TA)n Simple_repeat Simple_repeat 1 323 0 610 261 126 43 chr2 62913415 62913645 -190342938 + MLT1J2 LTR MaLR 202 450 0 197 333 0 13 chr2 62913783 62913858 -190342725 - L2 LINE L2 -5 3267 3194 278 247 194 11 chr2 62913913 62914006 -190342577 - L2 LINE L2 -5 3267 3158 232 324 0 0 chr2 62914525 62914596 -190341987 + L2 LINE L2 3202 3272 0 279 326 124 8 chr2 62914727 62914856 -190341727 + MER117 DNA MER1_type 2 145 -52 1944 132 28 11 chr2 62915691 62915978 -190340605 + AluSx SINE Alu 11 302 -10 225 91 39 156 chr2 62917944 62918021 -190338562 - LTR13 LTR ERVK -292 715 648 25 0 0 0 chr2 62918242 62918267 -190338316 + AT_rich Low_complexity Low_complexity 1 25 0 482 245 106 13 chr2 62919609 62919760 -190336823 - MIR SINE MIR -50 212 48 1046 103 0 4 chr2 62920559 62920821 -190335762 + (TAGA)n Simple_repeat Simple_repeat 1 261 0 258 268 70 0 chr2 62921402 62921473 -190335110 - MIR SINE MIR -59 149 74 264 250 50 12 chr2 62922096 62922176 -190334407 + L1ME LINE L1 5479 5561 -601 772 245 133 30 chr2 62922190 62922492 -190334091 - L2 LINE L2 -1047 2267 1935 422 307 42 18 chr2 62922653 62922819 -190333764 - MIR SINE MIR -44 218 49 318 307 9 35 chr2 62922959 62923073 -190333510 + MER81 DNA DNA 3 113 -1 738 225 42 33 chr2 62923955 62924168 -190332415 + MER20 DNA MER1_type 3 217 -2 1751 257 56 5 chr2 62924529 62924957 -190331626 - MLT1J2 LTR MaLR 0 450 1 322 265 124 38 chr2 62925397 62925582 -190331001 - MIR SINE MIR -30 232 32 486 229 7 64 chr2 62926153 62926293 -190330290 + MIR SINE MIR 86 217 -45 2686 114 11 19 chr2 62927690 62928068 -190328515 - THE1C LTR MaLR 0 375 1 11089 114 35 5 chr2 62928068 62929602 -190326981 - THE1C-int LTR MaLR 0 1580 1 2295 106 70 22 chr2 62929602 62929960 -190326623 - THE1C LTR MaLR 0 375 1 287 242 209 0 chr2 62930641 62930732 -190325851 + MER58B DNA MER1_type 229 338 -3 2889 101 34 240 chr2 62933168 62934106 -190322477 - Tigger3(Golem) DNA MER2_type 0 3029 2285 633 189 0 0 chr2 62934106 62934212 -190322371 - Tigger3(Golem) DNA MER2_type -2921 108 3 914 228 11 0 chr2 62935273 62935462 -190321121 - MER82 DNA MER2_type -462 191 1 479 260 7 27 chr2 62936443 62936589 -190319994 - MIR SINE MIR -9 253 111 197 329 123 40 chr2 62937686 62937963 -190318620 + L2 LINE L2 2922 3221 -51 802 230 5 42 chr2 62938626 62938817 -190317766 + MIR3 SINE MIR 20 203 -5 348 160 27 27 chr2 62939973 62940048 -190316535 + MER5A DNA MER1_type 9 83 -106 610 314 11 11 chr2 62940208 62940393 -190316190 + MIR SINE MIR 78 262 0 903 103 0 0 chr2 62940717 62940833 -190315750 - AluSg/x SINE Alu -18 294 179 340 250 0 0 chr2 62940945 62941025 -190315558 + MER116 DNA Mariner 1 80 0 180 0 0 0 chr2 62941391 62941411 -190315172 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 277 324 88 74 chr2 62943139 62943388 -190313195 + L2 LINE L2 2606 2850 -422 191 36 36 0 chr2 62943388 62943416 -190313167 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 277 324 88 74 chr2 62943416 62943779 -190312804 + L2 LINE L2 2850 3239 -33 361 256 155 0 chr2 62943938 62944067 -190312516 - MIR SINE MIR -6 256 108 435 301 92 40 chr2 62945254 62945486 -190311097 + MIR SINE MIR 19 262 0 224 200 15 0 chr2 62946916 62946981 -190309602 + GA-rich Low_complexity Low_complexity 6 71 0 21 0 0 0 chr2 62948145 62948166 -190308417 + AT_rich Low_complexity Low_complexity 1 21 0 197 244 81 12 chr2 62949155 62949241 -190307342 - MIR SINE MIR -1 261 170 28 48 0 0 chr2 62949245 62949287 -190307296 + AT_rich Low_complexity Low_complexity 1 42 0 450 257 83 7 chr2 62949298 62949442 -190307141 - MIR SINE MIR -106 156 2 196 335 99 20 chr2 62950059 62950211 -190306372 + MIR3 SINE MIR 24 187 -21 366 328 52 56 chr2 62951001 62951630 -190304953 + L2 LINE L2 2486 3108 -164 273 194 28 130 chr2 62951646 62951691 -190304892 + MER5B DNA MER1_type 81 129 -49 2172 140 0 0 chr2 62951691 62951999 -190304584 - AluSx SINE Alu -4 308 1 273 194 28 130 chr2 62951999 62952061 -190304522 + MER5B DNA MER1_type 129 177 -1 22 0 0 0 chr2 62952378 62952400 -190304183 + AT_rich Low_complexity Low_complexity 1 22 0 270 95 0 0 chr2 62954500 62954542 -190302041 + (TC)n Simple_repeat Simple_repeat 2 43 0 183 42 0 0 chr2 62954876 62954900 -190301683 + (TTGG)n Simple_repeat Simple_repeat 1 24 0 217 170 21 0 chr2 62955136 62955183 -190301400 + CT-rich Low_complexity Low_complexity 1 48 0 240 348 0 85 chr2 62957228 62957346 -190299237 - L2 LINE L2 -22 3250 3143 2493 121 41 8 chr2 62957686 62958049 -190298534 - THE1C LTR MaLR 0 375 1 955 9 0 0 chr2 62959959 62960067 -190296516 - AluYa5/8 SINE Alu 0 311 204 3788 136 52 0 chr2 62960097 62960699 -190295884 - L1MB1 LINE L1 -6 6162 5530 338 259 103 9 chr2 62961749 62961865 -190294718 - L1MC4 LINE L1 -1331 6711 6585 207 162 0 0 chr2 62962165 62962202 -190294381 + (TGGA)n Simple_repeat Simple_repeat 3 39 0 521 289 60 49 chr2 62962692 62963138 -190293445 + L2 LINE L2 2553 3059 -213 519 345 54 5 chr2 62963568 62963791 -190292792 - MIR SINE MIR -13 249 16 208 226 132 19 chr2 62964795 62964848 -190291735 + L2 LINE L2 3164 3222 -50 1084 226 32 5 chr2 62964854 62965071 -190291512 - MER58A DNA MER1_type -1 223 1 186 71 0 0 chr2 62965087 62965115 -190291468 + (A)n Simple_repeat Simple_repeat 1 28 0 286 320 5 20 chr2 62965115 62965232 -190291351 + GA-rich Low_complexity Low_complexity 1 115 0 1188 203 106 4 chr2 62966142 62966398 -190290185 - MLT1E LTR MaLR -4 589 308 2111 130 0 7 chr2 62968443 62968744 -190287839 + AluSx SINE Alu 2 300 -12 401 286 57 129 chr2 62969015 62969333 -190287250 + L2 LINE L2 2940 3234 -38 485 274 101 64 chr2 62969586 62969805 -190286778 - MIR SINE MIR -27 235 9 249 139 0 0 chr2 62969912 62969955 -190286628 + (CTAG)n Simple_repeat Simple_repeat 1 43 0 240 35 0 0 chr2 62970181 62970210 -190286373 + (TTTTC)n Simple_repeat Simple_repeat 5 33 0 308 294 92 17 chr2 62970400 62970519 -190286064 + L2 LINE L2 3140 3267 -5 209 244 0 0 chr2 62972847 62972888 -190283695 + (TTA)n Simple_repeat Simple_repeat 2 42 0 189 0 0 0 chr2 62973134 62973155 -190283428 + (A)n Simple_repeat Simple_repeat 1 21 0 672 304 16 81 chr2 62973833 62974155 -190282428 - L2 LINE L2 0 3313 3013 2350 57 3 3 chr2 62974281 62974586 -190281997 + AluY SINE Alu 1 305 0 28 29 0 0 chr2 62979139 62979174 -190277409 + AT_rich Low_complexity Low_complexity 1 35 0 249 167 0 0 chr2 62980660 62980714 -190275869 + (TG)n Simple_repeat Simple_repeat 2 55 0 260 227 11 0 chr2 62981091 62981179 -190275404 + (TA)n Simple_repeat Simple_repeat 2 90 0 536 295 86 57 chr2 62981364 62981608 -190274975 + MIR SINE MIR 7 257 -5 360 266 0 82 chr2 62982283 62982441 -190274142 - L2 LINE L2 -75 3238 3094 1745 163 19 26 chr2 62983166 62983473 -190273110 - AluJb SINE Alu -6 306 2 612 200 43 21 chr2 62983507 62983647 -190272936 + MIR SINE MIR 84 226 -36 291 235 37 0 chr2 62986266 62986347 -190270236 + MIR SINE MIR 114 197 -65 201 156 0 0 chr2 62986597 62986629 -190269954 + (CCTA)n Simple_repeat Simple_repeat 1 32 0 546 326 35 68 chr2 62990528 62990982 -190265601 - L3 LINE CR1 -89 1488 1050 500 263 13 26 chr2 62994517 62994532 -190262051 - L2 LINE L2 0 3313 3299 192 77 0 0 chr2 62994532 62994558 -190262025 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 500 263 13 26 chr2 62994558 62994698 -190261885 - L2 LINE L2 -14 3299 3160 213 250 0 29 chr2 62994863 62994931 -190261652 + CT-rich Low_complexity Low_complexity 1 66 0 183 396 10 42 chr2 62995189 62995285 -190261298 + L2 LINE L2 3089 3181 -91 229 234 62 16 chr2 62995557 62995621 -190260962 + MER91C DNA MER1_type 32 98 -42 28 29 0 0 chr2 62995801 62995836 -190260747 + AT_rich Low_complexity Low_complexity 1 35 0 943 193 0 47 chr2 62996129 62996300 -190260283 - FAM SINE Alu -12 163 1 455 288 77 38 chr2 62997733 62998186 -190258397 - LTR33 LTR ERVL -6 515 12 407 299 70 74 chr2 62998507 62998965 -190257618 - L2 LINE L2 -5 3308 2853 234 91 0 0 chr2 63000235 63000268 -190256315 + (CA)n Simple_repeat Simple_repeat 1 33 0 274 256 0 33 chr2 63000816 63000887 -190255696 - MIR SINE MIR -94 114 53 440 246 118 46 chr2 63001950 63002135 -190254448 + MIR SINE MIR 16 214 -48 192 97 0 0 chr2 63003537 63003568 -190253015 + (TG)n Simple_repeat Simple_repeat 1 31 0 219 262 0 0 chr2 63004102 63004163 -190252420 + MIR SINE MIR 70 130 -78 219 167 24 0 chr2 63004249 63004291 -190252292 + (CAT)n Simple_repeat Simple_repeat 2 44 0 267 328 94 11 chr2 63005033 63005213 -190251370 + MARNA DNA Mariner 352 546 -40 318 132 0 0 chr2 63005975 63006028 -190250555 + (T)n Simple_repeat Simple_repeat 1 53 0 513 327 146 43 chr2 63007361 63008140 -190248443 - L2 LINE L2 0 3272 2422 718 277 92 4 chr2 63008596 63008834 -190247749 - MIR SINE MIR -2 260 2 241 333 53 8 chr2 63009502 63009634 -190246949 - MIR SINE MIR 0 262 125 284 319 44 0 chr2 63009890 63010003 -190246580 + L1MC4a LINE L1 6631 6748 -1060 355 51 17 17 chr2 63010003 63010062 -190246521 + (TATAA)n Simple_repeat Simple_repeat 1 59 0 38 75 0 0 chr2 63010062 63010142 -190246441 + AT_rich Low_complexity Low_complexity 1 80 0 388 70 70 38 chr2 63010154 63010311 -190246272 + (TA)n Simple_repeat Simple_repeat 1 162 0 297 264 193 9 chr2 63010329 63010579 -190246004 + L1MC5 LINE L1 7602 7840 -121 305 24 24 0 chr2 63010579 63010621 -190245962 + (TG)n Simple_repeat Simple_repeat 2 44 0 297 264 193 9 chr2 63010621 63010727 -190245856 + L1MC5 LINE L1 7840 7925 -36 462 258 31 0 chr2 63011496 63011624 -190244959 + L1MC4 LINE L1 7781 7912 -130 242 301 62 53 chr2 63011928 63012041 -190244542 + MIR SINE MIR 145 258 -4 1083 209 5 10 chr2 63012525 63012731 -190243852 + MER6B DNA MER2_type 1 205 -5 646 222 216 0 chr2 63013420 63013591 -190242992 + MER58A DNA MER1_type 16 223 -1 351 0 0 0 chr2 63013878 63013917 -190242666 + (TG)n Simple_repeat Simple_repeat 2 40 0 529 276 70 27 chr2 63014654 63014839 -190241744 - MIR3 SINE MIR 0 208 16 416 223 85 62 chr2 63015031 63015186 -190241397 + MIR SINE MIR 103 262 0 288 111 0 0 chr2 63015756 63015810 -190240773 + (TTTG)n Simple_repeat Simple_repeat 1 54 0 195 225 0 0 chr2 63015932 63015972 -190240611 + L2 LINE L2 3254 3293 -20 2081 129 0 13 chr2 63016845 63017147 -190239436 + AluSx SINE Alu 1 298 -14 23 0 0 0 chr2 63017540 63017563 -190239020 + AT_rich Low_complexity Low_complexity 1 23 0 766 307 19 4 chr2 63017662 63017919 -190238664 + MIR SINE MIR 1 261 -1 310 290 0 0 chr2 63018276 63018345 -190238238 + L2 LINE L2 3243 3311 -2 187 401 54 7 chr2 63018507 63018654 -190237929 - L2 LINE L2 -185 3087 2934 190 354 179 15 chr2 63018879 63019074 -190237509 + MIR SINE MIR 34 260 -2 470 229 46 0 chr2 63020440 63020549 -190236034 - MIR SINE MIR -65 143 30 572 291 88 86 chr2 63021828 63022237 -190234346 + L2 LINE L2 2862 3271 -1 6821 132 15 9 chr2 63022403 63023714 -190232869 + L1MA5A LINE L1 4970 6294 -3 197 268 98 61 chr2 63023731 63023813 -190232770 + MIR SINE MIR 26 110 -152 1530 238 113 32 chr2 63023823 63024285 -190232298 + MLT1D LTR MaLR 7 505 0 215 281 98 0 chr2 63024285 63024367 -190232216 + MIR SINE MIR 107 196 -66 266 333 0 0 chr2 63024631 63024700 -190231883 + L2 LINE L2 3202 3270 -2 186 143 0 0 chr2 63025341 63025376 -190231207 + (TAA)n Simple_repeat Simple_repeat 3 37 0 477 209 61 180 chr2 63025791 63026013 -190230570 - L2 LINE L2 0 3313 3145 2218 123 3 0 chr2 63026013 63026321 -190230262 + AluSp SINE Alu 5 313 0 477 209 61 180 chr2 63026321 63026442 -190230141 - L2 LINE L2 -168 3145 3011 244 296 25 0 chr2 63026750 63026831 -190229752 - HsTC2 DNA Tc2 -1812 86 4 22 0 0 0 chr2 63028528 63028550 -190228033 + AT_rich Low_complexity Low_complexity 1 22 0 234 243 90 18 chr2 63029582 63029693 -190226890 - MIR SINE MIR 0 262 144 504 32 0 0 chr2 63029754 63029816 -190226767 + (TG)n Simple_repeat Simple_repeat 2 63 0 624 282 70 4 chr2 63030500 63030735 -190225848 - MIR SINE MIR 0 262 18 2040 319 92 31 chr2 63030757 63031219 -190225364 - L2 LINE L2 -3 3310 2877 1415 239 82 72 chr2 63031219 63031721 -190224862 - MLT1J LTR MaLR 0 511 5 2040 319 92 31 chr2 63031721 63032935 -190223648 - L2 LINE L2 -436 2877 1540 1044 260 77 80 chr2 63033088 63033163 -190223420 + L1MC4a LINE L1 5413 5487 -2321 2328 112 0 0 chr2 63033163 63033468 -190223115 + AluSx SINE Alu 1 305 -7 1044 260 77 80 chr2 63033468 63033965 -190222618 + L1MC4a LINE L1 5487 5983 -1825 242 332 42 42 chr2 63034167 63034357 -190222226 - L2 LINE L2 -1944 1370 1181 537 210 0 32 chr2 63034358 63034544 -190222039 + CT-rich Low_complexity Low_complexity 1 180 0 194 314 211 15 chr2 63034544 63034805 -190221778 - L2 LINE L2 -2126 1188 877 3014 192 26 2 chr2 63036852 63037389 -190219194 - MER44D DNA MER2_type 0 605 1 2851 10 0 0 chr2 63037844 63038148 -190218435 + AluYa5 SINE Alu 8 311 0 728 169 175 0 chr2 63038861 63039015 -190217568 - L1MC4 LINE L1 -459 7583 7403 308 273 70 64 chr2 63040006 63040193 -190216390 + MIR3 SINE MIR 14 201 -7 655 264 179 5 chr2 63040274 63040475 -190216108 - MIR SINE MIR -21 241 6 202 26 51 51 chr2 63041016 63041055 -190215528 + (CAGA)n Simple_repeat Simple_repeat 2 40 0 349 351 40 40 chr2 63042726 63042948 -190213635 + MIR SINE MIR 20 241 -21 232 356 50 38 chr2 63042961 63043360 -190213223 - LTR16C LTR ERVL -15 476 73 239 79 26 0 chr2 63043415 63043453 -190213130 + (GAAAA)n Simple_repeat Simple_repeat 2 40 0 288 315 0 0 chr2 63044148 63044221 -190212362 - MIR3 SINE MIR -25 183 111 995 245 23 0 chr2 63044360 63044576 -190212007 + MER58A DNA MER1_type 1 221 -3 21 0 0 0 chr2 63045548 63045569 -190211014 + AT_rich Low_complexity Low_complexity 1 21 0 500 366 19 13 chr2 63046143 63046520 -190210063 - MARNA DNA Mariner -25 561 183 1080 158 26 81 chr2 63046765 63046963 -190209620 + MER58A DNA MER1_type 2 187 -2233 2727 10 0 13 chr2 63046963 63047271 -190209312 - AluYa5 SINE Alu -7 304 1 1080 158 26 81 chr2 63047271 63047306 -190209277 + MER58A DNA MER1_type 187 222 -2 1513 212 57 22 chr2 63047443 63047844 -190208739 - MLT1C LTR MaLR -2 465 51 1078 143 5 5 chr2 63048431 63048620 -190207963 - MER53 DNA DNA 0 189 1 449 286 137 25 chr2 63048849 63049010 -190207573 + MIR SINE MIR 71 249 -13 247 291 37 45 chr2 63050287 63050421 -190206162 + MIR SINE MIR 124 256 -6 24 0 0 0 chr2 63051178 63051202 -190205381 + AT_rich Low_complexity Low_complexity 1 24 0 343 258 32 0 chr2 63051947 63052040 -190204543 + MIR SINE MIR 111 206 -56 4344 50 7 0 chr2 63054269 63054808 -190201775 + L1PA7 LINE L1 5612 6154 0 447 35 0 0 chr2 63056030 63056087 -190200496 + (TA)n Simple_repeat Simple_repeat 2 58 0 180 0 0 0 chr2 63056777 63056797 -190199786 + (CA)n Simple_repeat Simple_repeat 2 21 0 312 320 164 14 chr2 63058916 63059191 -190197392 - L2 LINE L2 -907 2407 2092 263 236 104 66 chr2 63059262 63059368 -190197215 - MIR3 SINE MIR 0 208 99 222 319 145 0 chr2 63059947 63060085 -190196498 + MIR SINE MIR 88 245 -17 261 83 0 0 chr2 63060357 63060393 -190196190 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 270 297 0 0 chr2 63061358 63061449 -190195134 - L1ME LINE L1 -401 5720 5630 344 296 11 0 chr2 63061728 63061816 -190194767 + MIR SINE MIR 72 160 -102 235 154 0 58 chr2 63061825 63061877 -190194706 - L2 LINE L2 0 3313 3265 28 48 0 0 chr2 63063824 63063866 -190192717 + AT_rich Low_complexity Low_complexity 1 42 0 704 204 8 0 chr2 63065425 63065557 -190191026 + FLAM_A SINE Alu 1 133 0 2579 68 0 0 chr2 63066081 63066388 -190190195 - AluY SINE Alu -4 307 1 215 367 50 25 chr2 63066663 63066783 -190189800 - L2 LINE L2 0 3272 3150 985 197 103 0 chr2 63066792 63066995 -190189588 + MER58A DNA MER1_type 1 224 0 444 267 27 91 chr2 63067003 63067190 -190189393 + MER5B DNA MER1_type 1 175 -3 360 296 12 56 chr2 63068515 63068677 -190187906 - MIR SINE MIR -50 212 58 180 270 0 48 chr2 63069593 63069656 -190186927 + L2 LINE L2 2996 3055 -217 1299 207 118 0 chr2 63069773 63070078 -190186505 + MER58B DNA MER1_type 1 341 0 990 296 58 37 chr2 63070932 63071743 -190184840 - L1MEd LINE L1 -2810 3572 2745 312 307 73 0 chr2 63071852 63072044 -190184539 - L1MEd LINE L1 -3794 2588 2383 2179 108 7 10 chr2 63072092 63072399 -190184184 - AluSx SINE Alu -6 306 1 830 149 0 8 chr2 63072568 63072702 -190183881 - FLAM_A SINE Alu 0 133 1 575 280 147 48 chr2 63072961 63073328 -190183255 - L1MEd LINE L1 -4641 1922 1369 868 278 62 66 chr2 63073349 63074109 -190182474 - L1MEd LINE L1 -4924 1448 692 190 308 0 0 chr2 63074903 63074955 -190181628 - L2 LINE L2 -4 3268 3217 1968 135 25 0 chr2 63075178 63075459 -190181124 + AluJb SINE Alu 1 288 -24 289 234 16 0 chr2 63075463 63075527 -190181056 + MER5A DNA MER1_type 125 189 0 215 150 0 25 chr2 63076949 63076989 -190179594 + (GAAAA)n Simple_repeat Simple_repeat 3 41 0 1420 236 13 81 chr2 63077004 63077546 -190179037 + MLT1D LTR MaLR 1 505 0 364 209 64 9 chr2 63077573 63077683 -190178900 - L1ME3A LINE L1 -177 6062 5947 765 278 92 27 chr2 63077686 63078504 -190178079 - L1ME3A LINE L1 -344 5887 5016 450 330 19 4 chr2 63078611 63078869 -190177714 - L1ME3A LINE L1 -1333 4882 4621 24 32 0 0 chr2 63078969 63079000 -190177583 + AT_rich Low_complexity Low_complexity 1 31 0 754 277 66 24 chr2 63079050 63079476 -190177107 - L1ME3A LINE L1 -1856 4359 3916 1590 228 37 17 chr2 63079551 63080305 -190176278 + L1MEc LINE L1 2060 2791 -3424 * 4713 209 33 41 chr2 63080292 63080880 -190175703 + L1MB2 LINE L1 3958 4549 -1622 2433 70 3 0 chr2 63080880 63081180 -190175403 + AluY SINE Alu 1 301 -10 4713 209 33 41 chr2 63081180 63082826 -190173757 + L1MB2 LINE L1 4549 6171 0 386 158 13 0 chr2 63082829 63082905 -190173678 + L1MEc LINE L1 2767 2843 -3372 24 32 0 0 chr2 63082978 63083009 -190173574 + AT_rich Low_complexity Low_complexity 1 31 0 1047 281 114 46 chr2 63083021 63083089 -190173494 - L1MEc LINE L1 -2753 3462 3400 2730 26 0 6 chr2 63083089 63083402 -190173181 - AluY SINE Alu 0 311 1 1047 281 114 46 chr2 63083402 63084619 -190171964 - L1MEc LINE L1 -2815 3400 2266 2524 34 3 0 chr2 63084619 63084914 -190171669 - AluY SINE Alu -15 296 1 1047 281 114 46 chr2 63084914 63085974 -190170609 - L1MEc LINE L1 -3949 2266 1001 244 238 10 40 chr2 63086571 63086672 -190169911 - L1MEc LINE L1 -5994 211 114 23 68 0 0 chr2 63086701 63086745 -190169838 + AT_rich Low_complexity Low_complexity 1 44 0 450 302 78 51 chr2 63087499 63087628 -190168955 - L2 LINE L2 -24 3289 3165 806 291 5 0 chr2 63087628 63087834 -190168749 + MER63A DNA MER1_type 4 210 0 450 302 78 51 chr2 63087834 63088038 -190168545 - L2 LINE L2 -148 3165 2947 260 197 0 15 chr2 63089172 63089238 -190167345 + GA-rich Low_complexity Low_complexity 2 66 0 456 343 12 17 chr2 63089293 63089465 -190167118 + MIR3 SINE MIR 33 203 -5 227 196 0 0 chr2 63089551 63089597 -190166986 + GA-rich Low_complexity Low_complexity 1 46 0 219 146 0 0 chr2 63089598 63089639 -190166944 + (GGA)n Simple_repeat Simple_repeat 3 43 0 6253 152 102 8 chr2 63092730 63093855 -190162728 - Tigger3b DNA MER2_type 0 1231 1 2300 92 3 0 chr2 63094252 63094545 -190162038 + AluSp SINE Alu 13 306 -7 551 265 135 5 chr2 63097270 63097470 -190159113 - MIR SINE MIR -11 251 26 5961 248 71 21 chr2 63097823 63099756 -190156827 + L1MEc LINE L1 10 2039 -4357 228 67 0 0 chr2 63100348 63100378 -190156205 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 1501 229 16 22 chr2 63100744 63101239 -190155344 - L1MEc LINE L1 -3461 2754 2209 1579 177 54 0 chr2 63101239 63101516 -190155067 - L1PA16 LINE L1 -2 6164 5873 1501 229 16 22 chr2 63101516 63101664 -190154919 - L1MEc LINE L1 -4006 2209 2062 384 169 26 0 chr2 63101706 63101783 -190154800 + L1MA9 LINE L1 6234 6312 0 36734 55 3 1 chr2 63101948 63106485 -190150098 + L1PA4 LINE L1 12 4562 -1584 7974 31 2 0 chr2 63106485 63107828 -190148755 + L1PA4 LINE L1 4824 6151 -4 36734 55 3 1 chr2 63107828 63107852 -190148731 + L1PA4 LINE L1 4562 4584 -1562 383 278 73 73 chr2 63107933 63108167 -190148416 - MIR SINE MIR -4 258 25 318 222 0 56 chr2 63108228 63108300 -190148283 + L2 LINE L2 3246 3313 0 2359 95 0 3 chr2 63108855 63109159 -190147424 - AluSq SINE Alu -9 304 2 238 284 168 0 chr2 63110830 63110925 -190145658 + MIR SINE MIR 121 231 -31 1407 250 101 22 chr2 63111693 63112101 -190144482 + MLT2B2 LTR ERVL 1 440 -75 491 171 9 0 chr2 63112102 63112207 -190144376 + (TAGA)n Simple_repeat Simple_repeat 4 109 0 279 170 19 0 chr2 63112208 63112261 -190144322 + MLT2B2 LTR ERVL 467 520 0 2996 219 112 33 chr2 63112272 63113186 -190143397 + Zaphod DNA AcHobo 6 991 -3040 1459 200 128 5 chr2 63113183 63113558 -190143025 + Zaphod DNA AcHobo 3595 4015 -16 * 286 275 193 9 chr2 63114591 63114700 -190141883 + MIR3 SINE MIR 5 133 -75 2341 114 0 0 chr2 63114739 63115046 -190141537 - AluSx SINE Alu -5 307 1 346 283 85 51 chr2 63116306 63116483 -190140100 - MIR SINE MIR -71 191 9 559 235 30 8 chr2 63117026 63117158 -190139425 - MIR3 SINE MIR -41 167 33 1569 236 45 45 chr2 63117261 63117766 -190138817 + L1ME2 LINE L1 5651 6155 -9 2090 105 56 0 chr2 63117771 63118057 -190138526 - AluSx SINE Alu -10 302 1 2096 119 0 0 chr2 63118757 63119035 -190137548 + AluSg SINE Alu 1 278 -32 333 0 0 0 chr2 63119035 63119072 -190137511 + (GA)n Simple_repeat Simple_repeat 1 37 0 267 33 0 0 chr2 63119371 63119401 -190137182 - MLT2B2 LTR ERVL 0 554 525 303 116 0 0 chr2 63119439 63119482 -190137101 + Alu SINE Alu 2 44 -264 * 2021 195 128 0 chr2 63119479 63119910 -190136673 - MLT2B2 LTR ERVL -29 486 1 199 245 196 39 chr2 63120019 63120121 -190136462 - MER5A DNA MER1_type -28 161 44 * 297 350 0 10 chr2 63120053 63120153 -190136430 + MER5A DNA MER1_type 91 189 0 715 298 98 38 chr2 63121351 63121720 -190134863 - LTR16C LTR ERVL 0 491 101 228 263 111 30 chr2 63121853 63121952 -190134631 + MIR SINE MIR 156 262 0 1077 283 56 45 chr2 63122587 63123032 -190133551 - L2 LINE L2 -3 3310 2861 882 326 211 5 chr2 63123071 63123669 -190132914 - L2 LINE L2 -1814 1500 780 234 320 13 0 chr2 63123741 63123819 -190132764 - L2 LINE L2 -2456 858 780 338 324 43 50 chr2 63124070 63124209 -190132374 - MIR3 SINE MIR -50 158 21 635 267 102 19 chr2 63124246 63124452 -190132131 + MIR SINE MIR 21 243 -19 354 45 0 0 chr2 63125291 63125335 -190131248 + (GAAAA)n Simple_repeat Simple_repeat 3 46 0 198 0 0 0 chr2 63125356 63125378 -190131205 + (A)n Simple_repeat Simple_repeat 1 22 0 357 323 122 32 chr2 63126052 63126241 -190130342 + MIR3 SINE MIR 1 206 -2 808 153 158 27 chr2 63126660 63126843 -190129740 - MER20 DNA MER1_type -2 217 11 455 257 182 27 chr2 63127816 63128112 -190128471 - L1ME LINE L1 -363 5801 5460 23 0 0 0 chr2 63128199 63128222 -190128361 + AT_rich Low_complexity Low_complexity 1 23 0 422 328 71 26 chr2 63128394 63128662 -190127921 + L1ME LINE L1 5406 5685 -436 189 0 0 0 chr2 63129881 63129902 -190126681 + (TAAAAA)n Simple_repeat Simple_repeat 2 22 0 1615 205 3 7 chr2 63129955 63130252 -190126331 + AluJo SINE Alu 3 298 -14 185 154 26 0 chr2 63130258 63130297 -190126286 + (TAGA)n Simple_repeat Simple_repeat 3 42 0 452 197 15 15 chr2 63131412 63131544 -190125039 + GA-rich Low_complexity Low_complexity 1 132 0 28 0 0 0 chr2 63132635 63132663 -190123920 + AT_rich Low_complexity Low_complexity 1 28 0 704 199 0 0 chr2 63133253 63133389 -190123194 - MIR SINE MIR -48 214 79 787 216 81 51 chr2 63134297 63134533 -190122050 + MIR SINE MIR 8 250 -12 217 293 35 0 chr2 63136987 63137045 -190119538 - L2 LINE L2 -8 3264 3205 275 340 72 59 chr2 63138844 63139235 -190117348 + L2 LINE L2 2562 2957 -357 305 331 122 0 chr2 63139272 63139453 -190117130 + L2 LINE L2 3070 3272 0 512 374 12 0 chr2 63139789 63139960 -190116623 - MER91A DNA MER1_type 0 196 24 243 88 0 0 chr2 63140600 63140634 -190115949 + (CA)n Simple_repeat Simple_repeat 2 35 0 187 320 86 23 chr2 63141522 63141650 -190114933 + MIR SINE MIR 117 252 -10 387 0 0 0 chr2 63141650 63141693 -190114890 + (TTCC)n Simple_repeat Simple_repeat 2 44 0 396 200 0 0 chr2 63142553 63142643 -190113940 + (CA)n Simple_repeat Simple_repeat 1 90 0 570 225 39 50 chr2 63142863 63143045 -190113538 - MIR SINE MIR -2 260 81 3161 51 0 3 chr2 63143086 63143458 -190113125 + L1PA8 LINE L1 5802 6172 0 251 332 63 45 chr2 63143825 63144048 -190112535 - L3 LINE CR1 -4 1573 1347 419 304 167 0 chr2 63144780 63144948 -190111635 + MER91A DNA MER1_type 1 196 0 322 370 126 51 chr2 63145495 63145909 -190110674 - L2 LINE L2 -2 3270 2826 205 323 160 75 chr2 63146241 63147466 -190109117 - L2 LINE L2 -632 2682 1247 753 191 62 79 chr2 63147466 63147644 -190108939 + MER96 DNA MER1_type 1 175 0 205 323 160 75 chr2 63147644 63148253 -190108330 - L2 LINE L2 -2067 1247 691 246 284 68 0 chr2 63149496 63149570 -190107013 + L2 LINE L2 2972 3050 -222 2129 158 34 5 chr2 63149974 63150354 -190106229 + L1MD3 LINE L1 6726 7116 -879 358 157 17 148 chr2 63150354 63150469 -190106114 + MLT1F1 LTR MaLR 35 134 -433 1519 174 65 0 chr2 63150474 63150749 -190105834 + L1MC3 LINE L1 7210 7502 -283 * 43941 32 21 1 chr2 63150737 63156769 -190099814 + L1PA2 LINE L1 1 6155 0 1280 204 57 15 chr2 63156735 63157068 -190099515 + L1MC3 LINE L1 7437 7783 -2 * 507 294 51 17 chr2 63157094 63157271 -190099312 - MIR3 SINE MIR -14 194 12 273 57 0 0 chr2 63159086 63159121 -190097462 + (CA)n Simple_repeat Simple_repeat 2 36 0 222 171 0 0 chr2 63161185 63161226 -190095357 + (CATA)n Simple_repeat Simple_repeat 3 43 0 505 255 80 58 chr2 63162312 63162500 -190094083 + MLT1H1 LTR MaLR 11 202 -353 231 250 71 12 chr2 63164900 63164984 -190091599 + L3b LINE CR1 1310 1398 -185 318 278 139 9 chr2 63166688 63166796 -190089787 - MIR SINE MIR -24 238 117 569 263 46 42 chr2 63166871 63167130 -190089453 - MIR SINE MIR 0 262 3 220 284 43 52 chr2 63169098 63169214 -190087369 + L2 LINE L2 3186 3300 -13 244 262 117 19 chr2 63169422 63169525 -190087058 + L2 LINE L2 3190 3302 -11 202 157 20 20 chr2 63169729 63169780 -190086803 + T-rich Low_complexity Low_complexity 1 51 0 28 0 0 0 chr2 63171039 63171067 -190085516 + AT_rich Low_complexity Low_complexity 1 28 0 182 388 33 25 chr2 63171614 63171735 -190084848 + L2 LINE L2 3143 3264 -8 180 0 0 0 chr2 63172203 63172223 -190084360 + (A)n Simple_repeat Simple_repeat 1 20 0 452 307 83 19 chr2 63172520 63172784 -190083799 - LTR33 LTR ERVL -12 509 229 255 274 89 32 chr2 63172817 63172941 -190083642 - LTR33 LTR ERVL -373 148 18 197 258 15 98 chr2 63172956 63173088 -190083495 + MIR SINE MIR 110 230 -32 225 132 0 0 chr2 63173413 63173451 -190083132 + (CA)n Simple_repeat Simple_repeat 1 38 0 201 74 0 0 chr2 63173460 63173487 -190083096 + (CCA)n Simple_repeat Simple_repeat 1 27 0 378 285 19 76 chr2 63174310 63174468 -190082115 + MIR3 SINE MIR 19 167 -41 449 306 134 5 chr2 63174508 63174694 -190081889 - MIR SINE MIR -3 259 50 4383 186 17 32 chr2 63174751 63176439 -190080144 - L1MB2 LINE L1 0 6174 4481 201 289 0 19 chr2 63176770 63176822 -190079761 + MIR SINE MIR 205 255 -7 184 260 20 0 chr2 63179153 63179203 -190077380 - MIR SINE MIR -106 102 52 534 301 67 38 chr2 63179526 63180020 -190076563 + L1M4c LINE L1 1263 1918 -4645 2006 228 23 30 chr2 63180060 63180627 -190075956 + MLT2F LTR ERVL 3 620 -43 1629 177 82 0 chr2 63181314 63181596 -190074987 + AluJo SINE Alu 3 307 -5 2269 249 69 58 chr2 63182214 63182970 -190073613 + L1MC4a LINE L1 5266 6037 -1771 567 115 0 0 chr2 63182970 63183048 -190073535 + MADE1 DNA Mariner 3 80 0 2269 249 69 58 chr2 63183048 63183280 -190073303 + L1MC4a LINE L1 6037 6265 -1543 721 124 9 9 chr2 63183318 63183431 -190073152 - MER66A LTR ERV1 -5 473 361 2683 77 11 36 chr2 63183568 63183932 -190072651 - THE1A LTR MaLR 0 355 1 6830 92 24 2 chr2 63183955 63185122 -190071461 - L1PA14 LINE L1 -2 6159 4975 794 181 20 39 chr2 63185165 63185379 -190071204 - MER66A LTR ERV1 -240 302 97 4345 239 69 29 chr2 63185425 63187012 -190069571 + L1MC4 LINE L1 6293 8041 -1 21 0 0 0 chr2 63187713 63187734 -190068849 + AT_rich Low_complexity Low_complexity 1 21 0 1691 97 31 4 chr2 63188464 63188691 -190067892 + L1PA8 LINE L1 5940 6172 0 335 228 193 29 chr2 63190665 63190836 -190065747 + MIR SINE MIR 20 218 -44 372 250 40 32 chr2 63191442 63191566 -190065017 + MIR3 SINE MIR 70 194 -14 204 236 0 36 chr2 63191750 63191805 -190064778 - MIR SINE MIR -28 234 182 238 337 49 12 chr2 63192022 63192185 -190064398 + MIR3 SINE MIR 38 206 -2 2284 209 89 48 chr2 63194538 63195164 -190061419 - MLT1E1 LTR MaLR -2 652 1 357 82 0 0 chr2 63195377 63195426 -190061157 + (GGGA)n Simple_repeat Simple_repeat 4 52 0 280 163 26 0 chr2 63196124 63196200 -190060383 - L1PB4 LINE L1 -2 6154 6094 254 330 23 40 chr2 63196734 63196781 -190059802 - MIR SINE MIR -63 145 99 1805 170 17 10 chr2 63196781 63197075 -190059508 + AluJo SINE Alu 1 296 -16 254 330 23 40 chr2 63197075 63197177 -190059406 - MIR SINE MIR -109 99 20 39837 79 7 10 chr2 63197251 63203424 -190053159 - L1PA5 LINE L1 0 6154 2 196 180 0 20 chr2 63205007 63205057 -190051526 - MIR SINE MIR -112 150 102 866 273 115 5 chr2 63205240 63205624 -190050959 - L1ME4a LINE L1 -1 6120 5695 2208 122 0 0 chr2 63205698 63205994 -190050589 - AluSx SINE Alu -16 296 1 649 279 53 11 chr2 63206101 63206291 -190050292 + MIR3 SINE MIR 9 206 -2 351 0 0 0 chr2 63207680 63207719 -190048864 + (TG)n Simple_repeat Simple_repeat 2 40 0 876 153 11 6 chr2 63207875 63208051 -190048532 + CT-rich Low_complexity Low_complexity 1 177 0 43756 34 21 1 chr2 63208266 63214349 -190042234 + L1PA2 LINE L1 2 6206 0 206 290 65 48 chr2 63214735 63214859 -190041724 - L2 LINE L2 -226 3046 2921 410 286 30 0 chr2 63215090 63215223 -190041360 + MIR SINE MIR 60 196 -66 415 240 7 103 chr2 63215347 63215493 -190041090 + MIR3 SINE MIR 71 202 -6 867 238 5 0 chr2 63215725 63215910 -190040673 + MER5A DNA MER1_type 4 189 0 540 127 0 0 chr2 63217652 63217731 -190038852 - MADE1 DNA Mariner -1 79 1 263 303 30 10 chr2 63217859 63217958 -190038625 + CT-rich Low_complexity Low_complexity 4 104 0 1681 217 148 48 chr2 63220618 63221157 -190035426 - MLT1E LTR MaLR 0 593 1 244 319 67 22 chr2 63221240 63221375 -190035208 - L2 LINE L2 -2 3311 3171 398 292 0 62 chr2 63221522 63221666 -190034917 + MIR3 SINE MIR 62 196 -12 22 35 0 0 chr2 63222603 63222632 -190033951 + AT_rich Low_complexity Low_complexity 1 29 0 278 324 126 0 chr2 63223033 63223144 -190033439 - L2 LINE L2 0 3272 3148 271 157 176 0 chr2 63223448 63223534 -190033049 + MIR SINE MIR 87 147 -61 1715 234 167 4 chr2 63223546 63224012 -190032571 + MLT1F LTR MaLR 1 542 0 571 173 0 10 chr2 63224032 63224159 -190032424 - AluSg/x SINE Alu 0 304 179 243 400 33 0 chr2 63224226 63224376 -190032207 - L2 LINE L2 -2 3270 3116 461 231 0 9 chr2 63224618 63224726 -190031857 - L2 LINE L2 0 3313 3207 2251 85 4 0 chr2 63224794 63225126 -190031457 + AluY SINE Alu 1 333 0 671 281 67 5 chr2 63225126 63225350 -190031233 + MIR SINE MIR 19 256 -6 2168 125 16 0 chr2 63225756 63226059 -190030524 + AluSx SINE Alu 1 308 -4 244 286 16 0 chr2 63226321 63226384 -190030199 - MIR3 SINE MIR -1 207 144 568 155 63 35 chr2 63227352 63227494 -190029089 + MER112 DNA MER1_type 74 219 -41 196 336 109 0 chr2 63228459 63228569 -190028014 - MIR SINE MIR -65 143 22 2141 108 0 3 chr2 63228736 63229022 -190027561 + AluSx SINE Alu 1 285 -27 333 0 0 0 chr2 63229022 63229039 -190027544 + (CA)n Simple_repeat Simple_repeat 1 54 0 333 0 0 0 chr2 63229039 63229076 -190027507 + (CA)n Simple_repeat Simple_repeat 2 38 0 214 195 0 0 chr2 63229178 63229219 -190027364 + (TA)n Simple_repeat Simple_repeat 1 41 0 1641 158 42 7 chr2 63229714 63229998 -190026585 - AluJb SINE Alu -8 304 11 571 299 59 16 chr2 63230896 63231083 -190025500 + MER115 DNA AcHobo 258 452 -241 876 236 72 0 chr2 63231857 63232065 -190024518 + MIR SINE MIR 18 240 -22 2262 132 40 66 chr2 63232603 63233027 -190023556 - MLT2D LTR ERVL 0 414 2 270 81 0 0 chr2 63233096 63233133 -190023450 + (CA)n Simple_repeat Simple_repeat 2 38 0 566 318 51 23 chr2 63233272 63233486 -190023097 - MER115 DNA AcHobo -241 452 233 249 324 25 51 chr2 63234322 63234538 -190022045 + MIR SINE MIR 1 212 -50 297 291 0 0 chr2 63234976 63235055 -190021528 - MIR SINE MIR -67 141 63 2152 109 7 0 chr2 63236453 63236746 -190019837 + AluSp SINE Alu 1 295 -18 366 337 107 15 chr2 63237231 63237427 -190019156 - MIR SINE MIR -21 241 28 444 67 0 0 chr2 63239174 63239234 -190017349 + (TGGA)n Simple_repeat Simple_repeat 4 63 0 426 39 0 0 chr2 63239498 63239550 -190017033 + (TG)n Simple_repeat Simple_repeat 2 53 0 1009 180 6 0 chr2 63240357 63240524 -190016059 + AluJb SINE Alu 131 298 -14 322 215 19 47 chr2 63240530 63240637 -190015946 + GA-rich Low_complexity Low_complexity 4 107 0 2143 147 53 19 chr2 63241616 63241991 -190014592 - MLT1B LTR MaLR -2 388 1 495 287 72 36 chr2 63242162 63242441 -190014142 + L2 LINE L2 3019 3307 -6 1353 280 254 25 chr2 63243235 63244164 -190012419 - L2 LINE L2 -4 3309 2594 3322 135 42 33 chr2 63244164 63244713 -190011870 + MLT2B3 LTR ERVL 1 554 0 1353 280 254 25 chr2 63244713 63245380 -190011203 - L2 LINE L2 -719 2594 1326 831 244 18 18 chr2 63246115 63246332 -190010251 - MIR SINE MIR -17 245 29 394 232 69 53 chr2 63247432 63247573 -190009010 - MIR SINE MIR -63 145 55 2138 139 7 0 chr2 63247573 63247882 -190008701 - AluSx SINE Alu -1 311 1 394 232 69 53 chr2 63247882 63247923 -190008660 - MIR SINE MIR -153 55 16 271 262 0 0 chr2 63248306 63248367 -190008216 + GA-rich Low_complexity Low_complexity 3 63 0 3846 258 57 24 chr2 63250338 63251693 -190004890 + L1MC3 LINE L1 151 1460 -5104 2866 7 0 0 chr2 63251693 63252001 -190004582 + AluYa5 SINE Alu 1 308 -3 3846 258 57 24 chr2 63252001 63253320 -190003263 + L1MC3 LINE L1 1460 3094 -3470 1951 201 16 11 chr2 63253320 63253341 -190003242 - MLT1A1 LTR MaLR 0 365 346 448 86 143 0 chr2 63253341 63253411 -190003172 + MADE1 DNA Mariner 1 80 0 1951 201 16 11 chr2 63253411 63253752 -190002831 - MLT1A1 LTR MaLR -19 346 1 3471 232 62 15 chr2 63253752 63254800 -190001783 + L1MC3 LINE L1 3090 4186 -2378 761 139 19 0 chr2 63254802 63254910 -190001673 + AluSq/x SINE Alu 2 111 -201 341 125 36 18 chr2 63254964 63255020 -190001563 + AluSq/x SINE Alu 55 111 -192 1203 147 0 0 chr2 63255059 63255236 -190001347 + AluJb SINE Alu 116 292 -20 1012 220 20 35 chr2 63255236 63255491 -190001092 + L1MC3 LINE L1 4179 4429 -2135 982 220 0 28 chr2 63255497 63255711 -190000872 + AluJo SINE Alu 2 209 -103 1256 233 40 34 chr2 63255717 63256095 -190000488 + L1MC3 LINE L1 4414 4793 -1771 43252 39 22 1 chr2 63256098 63262128 -189994455 + L1PA3 LINE L1 1 6155 0 7921 185 65 57 chr2 63262204 63262733 -189993850 + L1MC3 LINE L1 4767 5291 -2912 9779 108 3 14 chr2 63262733 63264880 -189991703 - L1PA8 LINE L1 -2 6170 4006 7921 185 65 57 chr2 63264880 63266959 -189989624 + L1MC3 LINE L1 5291 7403 -800 185 0 40 0 chr2 63266959 63266984 -189989599 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 7921 185 65 57 chr2 63266984 63267078 -189989505 + L1MC3 LINE L1 7403 7495 -708 354 244 25 34 chr2 63267078 63267197 -189989386 + MLT1F1 LTR MaLR 7 124 -443 1022 190 6 6 chr2 63267201 63267380 -189989203 + L1MC3 LINE L1 7613 7791 -412 763 147 88 7 chr2 63267381 63267517 -189989066 + L1MC2 LINE L1 6185 6331 -13 307 132 19 0 chr2 63267523 63267576 -189989007 + L1ME3A LINE L1 6102 6155 -15 324 85 0 68 chr2 63267677 63267736 -189988847 - L1PA8 LINE L1 0 6172 6118 1193 29 0 14 chr2 63267752 63267892 -189988691 - L1PA5 LINE L1 0 6154 6017 1418 66 6 0 chr2 63267892 63268075 -189988508 + L1PA4 LINE L1 5732 5915 -240 * 31517 119 15 62 chr2 63268059 63269897 -189986686 - L1PA7 LINE L1 -41 6113 4191 3566 28 0 0 chr2 63269897 63270275 -189986308 + L1PA2 LINE L1 5762 6155 0 31517 119 15 62 chr2 63270275 63274843 -189981740 - L1PA7 LINE L1 -1963 4191 12 207 100 0 0 chr2 63275147 63275177 -189981406 + (T)n Simple_repeat Simple_repeat 1 30 0 369 283 46 46 chr2 63275837 63275989 -189980594 - MIR3 SINE MIR -6 202 51 205 259 37 19 chr2 63277195 63277249 -189979334 + L3 LINE CR1 1433 1487 -90 467 250 0 0 chr2 63277320 63277420 -189979163 - MER112 DNA MER1_type -96 164 65 343 346 22 15 chr2 63277647 63277783 -189978800 - MIR SINE MIR -82 180 44 254 309 195 13 chr2 63278006 63278155 -189978428 + MER5A DNA MER1_type 13 188 -1 257 270 95 14 chr2 63278407 63278481 -189978102 - MIR SINE MIR -110 98 19 300 315 61 42 chr2 63279015 63279180 -189977403 + MIR SINE MIR 89 256 -6 323 155 274 0 chr2 63284060 63284144 -189972439 + MLT1I LTR MaLR 303 409 0 374 320 59 11 chr2 63284350 63284551 -189972032 - MIR SINE MIR -33 229 21 185 353 88 10 chr2 63284732 63284834 -189971749 + MIR SINE MIR 22 131 -77 499 246 165 71 chr2 63285027 63285096 -189971487 + MLT1I LTR MaLR 85 146 -263 2215 92 44 0 chr2 63285096 63285389 -189971194 - AluSp SINE Alu -7 306 1 499 246 165 71 chr2 63285389 63285616 -189970967 + MLT1I LTR MaLR 146 409 0 255 213 53 53 chr2 63285679 63285754 -189970829 - L2 LINE L2 0 3313 3239 195 271 0 0 chr2 63286609 63286679 -189969904 + (TA)n Simple_repeat Simple_repeat 2 71 0 410 294 138 6 chr2 63286743 63286903 -189969680 + MIR3 SINE MIR 4 184 -24 672 246 54 30 chr2 63288574 63288777 -189967806 + MIR SINE MIR 29 236 -26 273 273 52 110 chr2 63288787 63288941 -189967642 + MIR SINE MIR 68 212 -50 22 0 0 0 chr2 63288984 63289006 -189967577 + AT_rich Low_complexity Low_complexity 1 22 0 620 281 30 43 chr2 63289895 63290130 -189966453 - MIR SINE MIR 0 262 31 273 341 16 54 chr2 63290458 63290587 -189965996 - L2 LINE L2 -33 3239 3116 2181 195 26 0 chr2 63291645 63292034 -189964549 + MLT2C2 LTR ERVL 7 405 -59 198 0 0 0 chr2 63292085 63292107 -189964476 + (TA)n Simple_repeat Simple_repeat 2 23 0 24 53 0 0 chr2 63292156 63292194 -189964389 + AT_rich Low_complexity Low_complexity 1 38 0 279 170 0 0 chr2 63292219 63292266 -189964317 + MLT2C2 LTR ERVL 469 515 0 347 235 0 12 chr2 63292280 63292361 -189964222 - HsTC2 DNA Tc2 -1818 80 1 1710 231 81 27 chr2 63293486 63293931 -189962652 - MLT1D LTR MaLR -1 504 36 3233 113 148 30 chr2 63293937 63294443 -189962140 - MER61E LTR ERV1 -3 566 1 243 366 10 20 chr2 63294686 63294787 -189961796 + MIR SINE MIR 45 144 -118 552 308 42 23 chr2 63294810 63295024 -189961559 - MIR SINE MIR -13 249 32 650 200 77 7 chr2 63295050 63295205 -189961378 + MER5B DNA MER1_type 9 174 -4 226 270 0 32 chr2 63295421 63295484 -189961099 + L2 LINE L2 3238 3298 -15 1644 224 141 11 chr2 63295652 63296099 -189960484 + MLT1D LTR MaLR 1 505 0 940 213 0 46 chr2 63296902 63297118 -189959465 - MIR SINE MIR -41 221 16 180 77 0 0 chr2 63297369 63297395 -189959188 + (TG)n Simple_repeat Simple_repeat 2 27 0 366 339 8 8 chr2 63297878 63297996 -189958587 - MIR3 SINE MIR -26 182 65 758 275 41 53 chr2 63298581 63300211 -189956372 + L1MEc LINE L1 868 2540 -3675 526 265 137 30 chr2 63301214 63301550 -189955033 - L2 LINE L2 -75 3238 2867 329 287 14 50 chr2 63302135 63302270 -189954313 + MER5A DNA MER1_type 1 113 -65 7751 47 2 0 chr2 63302396 63303709 -189952874 - L1PA5 LINE L1 -1 6153 4848 24 32 0 0 chr2 63303771 63303802 -189952781 + AT_rich Low_complexity Low_complexity 1 31 0 3159 36 0 0 chr2 63303811 63304167 -189952416 + L1PA8 LINE L1 5809 6164 -8 3075 239 34 34 chr2 63304217 63305121 -189951462 - L1ME1 LINE L1 -5 6230 5327 2177 242 62 37 chr2 63305131 63305378 -189951205 - L1ME1 LINE L1 -1555 4660 4421 845 141 96 45 chr2 63305378 63305559 -189951024 - AluJo/FRAM SINE Alu 0 302 137 1713 132 20 138 chr2 63305560 63305909 -189950674 - AluYb8 SINE Alu 0 308 1 2177 242 62 37 chr2 63305909 63306452 -189950131 - L1ME1 LINE L1 -1793 4422 3848 4729 137 12 26 chr2 63306454 63307222 -189949361 + HSMAR2 DNA Mariner 1 757 -545 3760 234 107 15 chr2 63307222 63308876 -189947707 - L1ME1 LINE L1 -2473 3742 1986 2614 162 69 55 chr2 63308876 63309341 -189947242 + MLT2B2 LTR ERVL 3 477 -38 396 0 0 0 chr2 63309341 63309385 -189947198 + (TA)n Simple_repeat Simple_repeat 2 45 0 2614 162 69 55 chr2 63309385 63309424 -189947159 + MLT2B2 LTR ERVL 477 514 -1 553 230 0 0 chr2 63309427 63309527 -189947056 + FLAM_A SINE Alu 33 132 -10 2450 135 0 11 chr2 63309527 63309883 -189946700 - THE1B LTR MaLR -12 352 1 633 124 93 0 chr2 63310048 63310145 -189946438 - AluSx SINE Alu -9 303 198 802 148 0 0 chr2 63310146 63310261 -189946322 - AluSx SINE Alu -198 115 1 4022 239 56 15 chr2 63310269 63311363 -189945220 - L1ME1 LINE L1 -5224 1172 34 201 377 0 14 chr2 63311587 63311656 -189944927 + MIR SINE MIR 34 101 -107 482 258 101 22 chr2 63311874 63312052 -189944531 - MIR3 SINE MIR -7 201 10 2156 154 21 44 chr2 63312354 63312738 -189943845 - THE1C LTR MaLR 0 375 1 270 207 85 24 chr2 63313297 63313379 -189943204 + MER91C DNA MER1_type 54 140 0 967 298 129 9 chr2 63313664 63314013 -189942570 - MLT1I LTR MaLR 0 409 19 188 182 23 0 chr2 63314093 63314137 -189942446 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 372 277 32 13 chr2 63316784 63316939 -189939644 + L1MC4a LINE L1 5688 5809 -312 1931 145 3 0 chr2 63317025 63317315 -189939268 + AluSx SINE Alu 9 299 -13 321 92 17 59 chr2 63317318 63317437 -189939146 + (TA)n Simple_repeat Simple_repeat 1 114 0 2410 133 40 47 chr2 63317519 63317948 -189938635 - MSTB LTR MaLR 0 426 1 880 100 5 41 chr2 63318513 63318578 -189938005 + (TAGA)n Simple_repeat Simple_repeat 1 67 -530 2162 162 60 30 chr2 63318578 63318979 -189937604 - MLT2D LTR ERVL -1 413 1 880 100 5 41 chr2 63318979 63319133 -189937450 + (TAGA)n Simple_repeat Simple_repeat 67 597 0 270 0 0 0 chr2 63319295 63319325 -189937258 + (TG)n Simple_repeat Simple_repeat 1 30 0 268 267 58 0 chr2 63319454 63319540 -189937043 - L2 LINE L2 -29 3284 3194 238 252 57 65 chr2 63319530 63319653 -189936930 - MIR SINE MIR -59 203 82 * 688 206 62 36 chr2 63320333 63320527 -189936056 - L2 LINE L2 -1 3312 3114 6760 134 29 8 chr2 63320972 63323028 -189933555 - L1MA5 LINE L1 -3 6297 4198 289 293 27 67 chr2 63324120 63324270 -189932313 - MIR3 SINE MIR -62 146 3 246 315 91 35 chr2 63324999 63325142 -189931441 - L3b LINE CR1 -119 1464 1314 469 269 8 132 chr2 63325571 63325828 -189930755 + MIR SINE MIR 38 262 0 677 296 132 22 chr2 63326211 63326582 -189930001 + MLT1J2 LTR MaLR 37 448 -2 817 217 59 51 chr2 63326634 63326887 -189929696 - MER112 DNA MER1_type 0 256 2 329 349 56 8 chr2 63326887 63327013 -189929570 - MIR SINE MIR -83 179 48 195 100 0 0 chr2 63329172 63329202 -189927381 + (T)n Simple_repeat Simple_repeat 1 30 0 2180 109 3 7 chr2 63330328 63330632 -189925951 - AluSx SINE Alu -7 305 3 2511 53 3 3 chr2 63333185 63333489 -189923094 + AluY SINE Alu 1 304 -7 532 275 51 6 chr2 63333705 63333883 -189922700 + MIR SINE MIR 77 262 0 387 0 0 0 chr2 63334180 63334223 -189922360 + (TTG)n Simple_repeat Simple_repeat 2 44 0 599 273 77 16 chr2 63334932 63335142 -189921441 - MIR SINE MIR -30 232 3 200 293 37 12 chr2 63335220 63335302 -189921281 + MIR SINE MIR 36 119 -89 368 277 34 8 chr2 63335309 63335428 -189921155 + MER94 DNA DNA 9 130 -4 876 269 84 54 chr2 63335851 63335972 -189920611 - L1MC/D LINE L1 -743 5403 5287 786 198 0 0 chr2 63335972 63336098 -189920485 + FLAM_C SINE Alu 3 128 -5 876 269 84 54 chr2 63336098 63336645 -189919938 - L1MC/D LINE L1 -859 5287 5122 523 261 43 0 chr2 63337655 63337793 -189918790 + MIR SINE MIR 118 261 -1 288 0 0 0 chr2 63338423 63338455 -189918128 + (CA)n Simple_repeat Simple_repeat 2 33 0 402 312 32 5 chr2 63339611 63339800 -189916783 + L1ME4a LINE L1 5691 5884 -237 734 281 47 5 chr2 63339989 63340232 -189916351 + MIR SINE MIR 19 262 0 377 286 103 0 chr2 63340281 63340407 -189916176 + MIR3 SINE MIR 70 208 0 351 187 106 26 chr2 63341770 63341889 -189914694 + MER5A DNA MER1_type 3 149 -29 794 244 86 61 chr2 63341975 63342335 -189914248 + MLT1J LTR MaLR 13 381 -130 843 186 54 0 chr2 63342393 63342560 -189914023 - L1PB4 LINE L1 -1 6155 5980 523 338 78 14 chr2 63342729 63342948 -189913635 + L3 LINE CR1 1319 1551 -26 266 0 0 29 chr2 63342961 63342996 -189913587 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 447 240 89 0 chr2 63343107 63343253 -189913330 + LTR50 LTR ERVL 1 159 -636 425 248 48 8 chr2 63343510 63343635 -189912948 + LTR33A LTR ERVL 394 523 0 208 241 135 92 chr2 63345370 63345511 -189911072 + L3b LINE CR1 1263 1409 -174 191 290 173 40 chr2 63346007 63346307 -189910276 + L2 LINE L2 2304 2643 -671 936 210 76 13 chr2 63346536 63346774 -189909809 + MER46C DNA MER2_type 83 335 -3 249 268 108 119 chr2 63347467 63347661 -189908922 + MIR SINE MIR 71 262 0 310 282 141 0 chr2 63347681 63347830 -189908753 - L2 LINE L2 -549 2765 2596 3647 197 39 27 chr2 63347885 63348733 -189907850 + L1MC4a LINE L1 6951 7808 0 460 299 56 0 chr2 63350283 63350427 -189906156 + MIR SINE MIR 22 173 -89 232 324 14 0 chr2 63351738 63351809 -189904774 - MER5A DNA MER1_type -52 137 66 2237 117 3 7 chr2 63351810 63352117 -189904466 - AluSq SINE Alu -7 306 1 185 313 62 0 chr2 63352263 63352343 -189904240 + MIR SINE MIR 60 144 -118 797 272 52 8 chr2 63352383 63352633 -189903950 - MIR SINE MIR 0 262 2 517 308 16 5 chr2 63353575 63353760 -189902823 + MIR SINE MIR 15 201 -61 1996 103 4 4 chr2 63353888 63354150 -189902433 - AluSq SINE Alu -15 298 37 194 250 44 29 chr2 63354500 63354568 -189902015 + MIR SINE MIR 67 135 -73 310 208 0 0 chr2 63355178 63355250 -189901333 + MIR SINE MIR 126 197 -65 714 185 30 7 chr2 63355254 63355389 -189901194 + MLT1A1 LTR MaLR 1 138 -227 956 200 0 0 chr2 63355389 63355554 -189901029 - FAM SINE Alu -1 48 1 1029 190 25 15 chr2 63355620 63355820 -189900763 + MLT1A1 LTR MaLR 164 365 0 26 0 0 0 chr2 63356207 63356233 -189900350 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr2 63359157 63359179 -189897404 + AT_rich Low_complexity Low_complexity 1 22 0 75 22 0 0 chr2 63360618 63360707 -189895876 + AT_rich Low_complexity Low_complexity 1 89 0 278 216 39 29 chr2 63360727 63360829 -189895754 - L1 LINE L1 -1328 4818 4716 2258 113 0 0 chr2 63360851 63361142 -189895441 + AluSc SINE Alu 1 291 -18 780 233 117 25 chr2 63361547 63361787 -189894796 - MIR SINE MIR 0 262 1 346 315 79 11 chr2 63364046 63364224 -189892359 - MIR SINE MIR 0 262 73 256 200 0 0 chr2 63365792 63365837 -189890746 - ORSL DNA AcHobo 0 275 231 21 0 0 0 chr2 63366022 63366043 -189890540 + AT_rich Low_complexity Low_complexity 1 21 0 359 264 73 9 chr2 63366282 63366392 -189890191 - L2 LINE L2 0 3313 3197 245 274 14 0 chr2 63367188 63367261 -189889322 - MIR SINE MIR -106 156 83 614 190 21 28 chr2 63367614 63367756 -189888827 + MER53 DNA DNA 2 142 -47 225 208 38 0 chr2 63369266 63369319 -189887264 - L2 LINE L2 -84 3188 3134 809 243 68 14 chr2 63369520 63369742 -189886841 + MIR SINE MIR 5 238 -24 25 0 0 0 chr2 63369821 63369846 -189886737 + AT_rich Low_complexity Low_complexity 1 25 0 183 193 119 92 chr2 63369994 63370103 -189886480 - L2 LINE L2 -193 3079 2968 402 289 86 21 chr2 63370678 63370865 -189885718 - MIR SINE MIR -1 261 63 444 240 8 48 chr2 63371375 63371500 -189885083 - L2 LINE L2 -1 3271 3152 180 333 48 24 chr2 63371946 63371978 -189884605 + L3b LINE CR1 1495 1525 -58 240 111 0 0 chr2 63371978 63372014 -189884569 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 180 333 48 24 chr2 63372014 63372065 -189884518 + L3b LINE CR1 1525 1580 -3 180 77 0 0 chr2 63373811 63373837 -189882746 + (TG)n Simple_repeat Simple_repeat 2 27 0 211 163 47 0 chr2 63374872 63374915 -189881668 + GA-rich Low_complexity Low_complexity 4 48 0 369 0 0 0 chr2 63375320 63375361 -189881222 + (TTC)n Simple_repeat Simple_repeat 2 42 0 2365 113 0 0 chr2 63375368 63375678 -189880905 - AluSq SINE Alu -3 310 1 247 184 105 53 chr2 63376155 63376269 -189880314 - MIR SINE MIR -35 227 108 24 0 0 0 chr2 63377269 63377293 -189879290 + AT_rich Low_complexity Low_complexity 1 24 0 246 202 43 12 chr2 63377840 63377934 -189878649 + MIR SINE MIR 104 198 -62 2191 122 0 0 chr2 63378082 63378376 -189878207 + AluSq SINE Alu 3 296 -17 716 144 181 19 chr2 63378489 63378500 -189878083 - MER53 DNA DNA -3 186 178 213 39 0 0 chr2 63378500 63378526 -189878057 + (CAA)n Simple_repeat Simple_repeat 2 27 0 716 144 181 19 chr2 63378526 63378674 -189877909 - MER53 DNA DNA -11 178 1 1727 196 16 21 chr2 63378739 63379042 -189877541 + L1MA10 LINE L1 5965 6267 -67 1364 198 64 21 chr2 63379042 63379371 -189877212 - MER2 DNA MER2_type -1 343 1 1727 196 16 21 chr2 63379371 63379439 -189877144 + L1MA10 LINE L1 6267 6334 0 2337 118 0 0 chr2 63379461 63379774 -189876809 + AluSq SINE Alu 1 313 0 222 45 68 0 chr2 63381597 63381641 -189874942 + (TTTG)n Simple_repeat Simple_repeat 3 49 0 607 266 33 5 chr2 63382509 63382693 -189873890 - MIR SINE MIR -28 234 46 204 40 0 0 chr2 63385194 63385219 -189871364 + (GGA)n Simple_repeat Simple_repeat 3 27 0 208 175 0 25 chr2 63385659 63385699 -189870884 + A-rich Low_complexity Low_complexity 3 41 0 376 233 19 19 chr2 63387076 63387179 -189869404 + L2 LINE L2 3201 3303 -10 200 211 19 19 chr2 63387745 63387797 -189868786 + G-rich Low_complexity Low_complexity 2 53 0 207 186 0 0 chr2 63388141 63388184 -189868399 + CT-rich Low_complexity Low_complexity 3 45 0 499 258 8 8 chr2 63389463 63389583 -189867000 - L2 LINE L2 0 3313 3194 333 0 0 0 chr2 63390645 63390682 -189865901 + (TG)n Simple_repeat Simple_repeat 1 37 0 623 297 22 30 chr2 63392614 63392883 -189863700 - L1MEd LINE L1 -4886 1233 967 1525 238 103 18 chr2 63392883 63393367 -189863216 + MLT1F LTR MaLR 40 519 -23 190 373 154 0 chr2 63393737 63393847 -189862736 - L2 LINE L2 -30 3242 3116 21 36 0 0 chr2 63394815 63394843 -189861740 + AT_rich Low_complexity Low_complexity 1 28 0 265 284 14 0 chr2 63395311 63395385 -189861198 - L2 LINE L2 -8 3305 3231 220 386 32 29 chr2 63395479 63395725 -189860858 - L2 LINE L2 -375 2939 2693 208 205 24 36 chr2 63396019 63396102 -189860481 + A-rich Low_complexity Low_complexity 4 85 0 352 288 118 20 chr2 63396691 63397090 -189859493 + L1ME4a LINE L1 4133 4574 -1572 240 297 68 24 chr2 63397244 63397493 -189859090 + L1ME4a LINE L1 4802 5061 -1085 21 36 0 0 chr2 63397712 63397740 -189858843 + AT_rich Low_complexity Low_complexity 1 28 0 231 259 9 26 chr2 63397743 63397859 -189858724 + L1ME4a LINE L1 5318 5431 -690 4684 136 24 5 chr2 63397934 63398679 -189857904 + Tigger2 DNA MER2_type 1 759 -1959 1512 155 8 4 chr2 63398739 63398984 -189857599 + Tigger2 DNA MER2_type 2473 2718 0 772 321 82 5 chr2 63398985 63399365 -189857218 + L1ME4a LINE L1 5527 5935 -186 499 199 123 41 chr2 63399421 63399567 -189857016 + MER5B DNA MER1_type 5 162 -16 1239 155 14 32 chr2 63399596 63399716 -189856867 + MER20 DNA MER1_type 3 119 -100 2046 172 18 21 chr2 63399716 63400105 -189856478 + MLT1B LTR MaLR 3 390 0 1239 155 14 32 chr2 63400105 63400203 -189856380 + MER20 DNA MER1_type 119 217 -2 253 312 0 40 chr2 63400264 63400389 -189856194 - L2 LINE L2 -775 2539 2420 1302 181 23 21 chr2 63400725 63401037 -189855546 + MLT2C1 LTR ERVL 31 397 0 1819 163 0 10 chr2 63401230 63401518 -189855065 + AluJo SINE Alu 3 287 -25 258 346 79 21 chr2 63401624 63401864 -189854719 - MIR SINE MIR -8 254 1 284 388 8 0 chr2 63401991 63402120 -189854463 + MIR SINE MIR 20 149 -113 242 297 0 0 chr2 63402375 63402439 -189854144 + MIR SINE MIR 76 139 -123 234 314 0 0 chr2 63403411 63403481 -189853102 + L2 LINE L2 3242 3311 -2 517 343 117 19 chr2 63405247 63405673 -189850910 + LTR67 LTR ERVL 43 510 -47 1013 263 59 46 chr2 63406379 63406839 -189849744 + L2 LINE L2 2847 3312 -1 885 255 158 24 chr2 63407087 63407467 -189849116 - MLT1J1 LTR MaLR -8 438 8 582 278 28 14 chr2 63407544 63407756 -189848827 + MIR SINE MIR 13 227 -35 263 295 181 20 chr2 63408511 63408660 -189847923 + MIR SINE MIR 18 190 -72 630 276 72 53 chr2 63409135 63409390 -189847193 + L1ME2 LINE L1 17 281 -6142 2194 102 6 22 chr2 63409390 63409735 -189846848 - AluSx SINE Alu 0 312 1 630 276 72 53 chr2 63409735 63409798 -189846785 + L1ME2 LINE L1 281 341 -6082 1168 243 57 39 chr2 63410322 63410394 -189846189 + L1ME2 LINE L1 2014 2083 -5039 345 24 0 0 chr2 63410394 63410436 -189846147 + (CA)n Simple_repeat Simple_repeat 1 42 0 1168 243 57 39 chr2 63410436 63410981 -189845602 + L1ME2 LINE L1 2083 3101 -4021 2088 139 0 7 chr2 63410996 63411290 -189845293 + AluSx SINE Alu 1 292 -20 387 183 0 0 chr2 63411295 63411377 -189845206 + GA-rich Low_complexity Low_complexity 3 84 0 3752 248 49 22 chr2 63411377 63412199 -189844384 + L1ME2 LINE L1 3057 3934 -3007 1674 207 3 3 chr2 63412199 63412508 -189844075 + AluJo SINE Alu 1 309 -3 3752 248 49 22 chr2 63412508 63413067 -189843516 + L1ME2 LINE L1 3934 4476 -2465 1197 233 155 24 chr2 63413080 63413667 -189842916 + L1ME2 LINE L1 4884 5547 -1394 471 293 29 0 chr2 63413667 63413807 -189842776 + MLT1G1 LTR MaLR 452 595 0 2897 229 77 15 chr2 63413818 63414773 -189841810 + L1ME2 LINE L1 5947 6958 -1 2126 125 20 0 chr2 63415489 63415793 -189840790 - AluSx SINE Alu -2 310 1 727 240 48 10 chr2 63415871 63416079 -189840504 + MIR SINE MIR 47 262 0 250 277 22 0 chr2 63416149 63416228 -189840355 + MIR SINE MIR 70 152 -56 204 40 0 0 chr2 63416512 63416537 -189840046 + (TTTTG)n Simple_repeat Simple_repeat 4 28 0 271 333 42 37 chr2 63416598 63416787 -189839796 + L2 LINE L2 2560 2749 -565 262 313 0 0 chr2 63417451 63417531 -189839052 + L3 LINE CR1 1480 1559 -18 517 261 33 33 chr2 63418215 63418368 -189838215 + MIR3 SINE MIR 19 171 -37 346 244 42 17 chr2 63418900 63419019 -189837564 - MIR3 SINE MIR -6 202 81 261 0 0 0 chr2 63420094 63420123 -189836460 + (CA)n Simple_repeat Simple_repeat 2 30 0 405 187 131 9 chr2 63421453 63421560 -189835023 + MER115 DNA AcHobo 492 611 -82 325 281 88 9 chr2 63422122 63422236 -189834347 + L1ME4a LINE L1 5563 5685 -2123 249 217 0 84 chr2 63422237 63422320 -189834263 + MIR SINE MIR 184 259 -3 488 255 76 42 chr2 63422336 63422599 -189833984 + L1ME4a LINE L1 5693 5964 -157 754 332 36 0 chr2 63422609 63422859 -189833724 + MIR SINE MIR 2 260 -2 340 115 0 0 chr2 63422880 63422932 -189833651 + L1ME4a LINE L1 5965 6016 -105 2386 99 0 7 chr2 63423833 63424135 -189832448 - AluSc SINE Alu -8 301 2 1996 121 0 30 chr2 63428104 63428402 -189828181 + AluSx SINE Alu 1 289 -23 192 77 0 0 chr2 63428407 63428433 -189828150 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2076 105 39 3 chr2 63429553 63429839 -189826744 + AluSc SINE Alu 1 296 -13 1799 168 10 0 chr2 63430330 63430622 -189825961 + AluJb SINE Alu 1 295 -17 187 191 0 21 chr2 63432944 63432991 -189823592 + L2 LINE L2 3015 3060 -212 2316 105 0 16 chr2 63434163 63434478 -189822105 + AluSg SINE Alu 1 310 0 545 266 128 10 chr2 63434974 63435286 -189821297 + L1ME4a LINE L1 5657 6005 -116 252 308 13 0 chr2 63435859 63435937 -189820646 + L3 LINE CR1 64 142 -1435 2322 103 0 3 chr2 63435983 63436293 -189820290 - AluSc SINE Alu 0 309 1 349 279 139 0 chr2 63437497 63437602 -189818981 - MER5A DNA MER1_type -1 188 99 395 51 0 17 chr2 63437602 63437661 -189818922 + (CA)n Simple_repeat Simple_repeat 2 59 0 349 279 139 0 chr2 63437661 63437720 -189818863 - MER5A DNA MER1_type -90 99 1 184 290 32 16 chr2 63437753 63437815 -189818768 - MIR SINE MIR -109 99 37 251 321 43 29 chr2 63438113 63438253 -189818330 + MIR SINE MIR 57 198 -64 406 186 71 53 chr2 63440142 63440255 -189816328 + L1MC4 LINE L1 6811 6925 -1117 234 207 0 0 chr2 63440263 63440321 -189816262 + GA-rich Low_complexity Low_complexity 5 62 0 260 287 0 10 chr2 63440383 63440484 -189816099 + L1MC4 LINE L1 7741 7840 -202 423 65 26 13 chr2 63440488 63440565 -189816018 + (TG)n Simple_repeat Simple_repeat 1 78 0 435 217 33 17 chr2 63440596 63440716 -189815867 + L1MC4 LINE L1 7919 8040 -2 281 253 13 0 chr2 63440746 63440821 -189815762 + MER69 DNA AcHobo 1 76 -2450 * 2192 194 38 6 chr2 63440820 63441299 -189815284 + MER69 DNA AcHobo 1937 2430 -96 261 57 0 0 chr2 63441347 63441382 -189815201 + (CATA)n Simple_repeat Simple_repeat 4 38 0 821 333 34 12 chr2 63442982 63443393 -189813190 - LTR16A LTR ERVL -15 435 16 472 258 57 6 chr2 63444773 63444932 -189811651 - MIR SINE MIR -1 261 95 326 310 54 16 chr2 63445453 63445582 -189811001 - MIR SINE MIR -50 212 79 2254 77 49 7 chr2 63446037 63446323 -189810260 - AluSq SINE Alu -10 303 6 488 265 105 39 chr2 63446330 63446511 -189810072 - MIR SINE MIR -56 206 14 1955 138 7 30 chr2 63446609 63446914 -189809669 - AluJb SINE Alu -14 298 1 348 293 117 21 chr2 63447769 63447957 -189808626 - MIR SINE MIR -52 210 5 1748 238 60 74 chr2 63448083 63448745 -189807838 - MER77 LTR ERV1 -6 599 56 200 259 17 0 chr2 63448798 63448856 -189807727 + GA-rich Low_complexity Low_complexity 2 60 0 2224 95 26 3 chr2 63449035 63449340 -189807243 - AluSx SINE Alu 0 312 1 181 368 26 0 chr2 63449784 63449851 -189806732 + MIR3 SINE MIR 97 165 -43 441 283 157 0 chr2 63449851 63450010 -189806573 + MER5A DNA MER1_type 4 187 -2 360 0 0 0 chr2 63451299 63451339 -189805244 + (CA)n Simple_repeat Simple_repeat 2 41 0 1163 101 6 6 chr2 63451679 63451837 -189804746 + U1 snRNA snRNA 1 158 -7 23 0 0 0 chr2 63451837 63451860 -189804723 + AT_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr2 63452720 63452740 -189803843 + (A)n Simple_repeat Simple_repeat 1 20 0 465 324 40 0 chr2 63453296 63453472 -189803111 + MIR SINE MIR 47 229 -33 551 282 123 22 chr2 63454901 63455128 -189801455 - MIR SINE MIR -9 253 4 2122 121 3 0 chr2 63455769 63456075 -189800508 + AluSx SINE Alu 1 307 -5 203 88 29 0 chr2 63456075 63456109 -189800474 + (GGAGA)n Simple_repeat Simple_repeat 1 35 0 1554 11 0 0 chr2 63456109 63456289 -189800294 + (GGAAA)n Simple_repeat Simple_repeat 1 180 0 1623 188 13 3 chr2 63456516 63456825 -189799758 - AluJb SINE Alu 0 312 1 447 208 38 98 chr2 63457673 63457708 -189798875 + MLT1K LTR MaLR 412 448 -140 2050 94 28 0 chr2 63457708 63457996 -189798587 + AluSx SINE Alu 1 296 -16 447 208 38 98 chr2 63457996 63458143 -189798440 + MLT1K LTR MaLR 448 583 -5 504 303 15 20 chr2 63458905 63459100 -189797483 - MIR SINE MIR -45 217 24 237 33 0 0 chr2 63459721 63459751 -189796832 + (GA)n Simple_repeat Simple_repeat 1 30 0 1638 204 24 0 chr2 63460049 63460378 -189796205 - MER58B DNA MER1_type 0 341 5 380 347 0 6 chr2 63460456 63460626 -189795957 - L1ME3A LINE L1 -231 5939 5771 384 284 82 8 chr2 63460639 63460773 -189795810 - L1ME LINE L1 -356 5806 5663 1275 83 6 0 chr2 63460995 63461164 -189795419 + L1PA8 LINE L1 5990 6159 -13 28 0 0 0 chr2 63461172 63461200 -189795383 + AT_rich Low_complexity Low_complexity 1 28 0 193 261 31 15 chr2 63461375 63461440 -189795143 - L2 LINE L2 -338 2934 2869 313 346 44 25 chr2 63462406 63462565 -189794018 + MIR SINE MIR 27 188 -74 665 280 118 34 chr2 63463014 63463123 -189793460 + Charlie7 DNA MER1_type 6 104 -2508 2133 235 79 12 chr2 63463123 63463707 -189792876 - MLT1E2 LTR MaLR -3 623 1 665 280 118 34 chr2 63463707 63463893 -189792690 + Charlie7 DNA MER1_type 104 326 -2286 874 199 116 33 chr2 63463935 63464162 -189792421 + Charlie7 DNA MER1_type 2168 2428 -184 2183 95 0 3 chr2 63464162 63464457 -189792126 - AluSq SINE Alu -19 294 1 874 199 116 33 chr2 63464457 63464531 -189792052 + Charlie7 DNA MER1_type 2428 2494 -118 247 257 40 34 chr2 63464600 63464748 -189791835 + Charlie7 DNA MER1_type 2456 2604 -8 1577 132 0 0 chr2 63465918 63466146 -189790437 + AluSg1 SINE Alu 1 228 -81 2462 71 3 0 chr2 63466241 63466552 -189790031 + AluSp SINE Alu 2 313 0 648 311 109 25 chr2 63466682 63467003 -189789580 - L2 LINE L2 -1 3271 2924 1948 137 0 10 chr2 63467132 63467446 -189789137 + AluSx SINE Alu 1 311 -1 2158 127 0 0 chr2 63469005 63469313 -189787270 + AluSq SINE Alu 1 308 -5 183 80 0 0 chr2 63469371 63469396 -189787187 + (CA)n Simple_repeat Simple_repeat 1 25 0 501 157 83 76 chr2 63469926 63470097 -189786486 - MLT1J1 LTR MaLR -7 425 269 981 113 7 0 chr2 63470436 63470578 -189786005 + AluSq/x SINE Alu 1 143 -169 762 78 0 240 chr2 63470644 63470836 -189785747 + AluSg/x SINE Alu 154 299 -10 216 0 0 0 chr2 63470939 63470963 -189785620 + (CACCC)n Simple_repeat Simple_repeat 4 27 0 283 311 44 29 chr2 63471069 63471275 -189785308 + L2 LINE L2 2829 3037 -235 1513 121 0 22 chr2 63471353 63471577 -189785006 + MER20 DNA MER1_type 1 219 0 869 74 37 6 chr2 63471692 63471854 -189784729 + (TAGA)n Simple_repeat Simple_repeat 3 169 0 280 314 96 26 chr2 63472740 63472896 -189783687 - L2 LINE L2 -8 3264 3098 249 33 0 0 chr2 63473374 63473404 -189783179 + (TG)n Simple_repeat Simple_repeat 1 30 0 520 303 159 5 chr2 63475067 63475262 -189781321 + MIR SINE MIR 20 244 -18 225 108 0 0 chr2 63475293 63475330 -189781253 + (A)n Simple_repeat Simple_repeat 1 37 0 1153 148 51 55 chr2 63475494 63475711 -189780872 - MER58A DNA MER1_type -8 216 1 241 280 74 85 chr2 63476009 63476242 -189780341 - MIR SINE MIR -28 234 3 418 262 214 24 chr2 63476934 63477144 -189779439 - MIR SINE MIR 0 262 13 22 0 0 0 chr2 63478431 63478453 -189778130 + AT_rich Low_complexity Low_complexity 1 22 0 447 358 0 0 chr2 63478747 63478926 -189777657 + (TG)n Simple_repeat Simple_repeat 1 179 0 246 222 0 28 chr2 63478943 63479015 -189777568 + (TG)n Simple_repeat Simple_repeat 2 71 0 24 0 0 0 chr2 63480071 63480095 -189776488 + AT_rich Low_complexity Low_complexity 1 24 0 186 275 62 38 chr2 63480406 63480486 -189776097 + MIR3 SINE MIR 118 199 -9 3451 194 63 43 chr2 63481455 63482526 -189774057 - L1ME1 LINE L1 -32 6134 5030 2264 82 3 0 chr2 63482526 63482820 -189773763 + AluSp SINE Alu 1 295 -18 3451 194 63 43 chr2 63482820 63483294 -189773289 - L1ME1 LINE L1 -1136 5030 4567 450 276 105 44 chr2 63483737 63483918 -189772665 - MIR3 SINE MIR -14 194 3 2681 83 128 5 chr2 63484509 63484908 -189771675 + LTR7 LTR ERV1 1 448 -2 4397 96 7 17 chr2 63484910 63485599 -189770984 + HERVH LTR ERV1 1 620 -7093 16721 99 40 11 chr2 63485600 63488080 -189768503 + HERVH LTR ERV1 437 2987 -4726 901 142 20 0 chr2 63488074 63488222 -189768361 + HERVH LTR ERV1 3140 3290 -4423 * 3107 102 0 7 chr2 63488212 63488654 -189767929 + HERVH LTR ERV1 3492 3930 -3783 396 161 65 0 chr2 63488659 63488721 -189767862 + HERVH LTR ERV1 5754 5819 -1894 2370 87 70 14 chr2 63488721 63489090 -189767493 + HERVH LTR ERV1 7324 7713 0 1919 118 66 109 chr2 63489090 63489558 -189767025 + LTR7 LTR ERV1 1 448 -2 1724 235 70 57 chr2 63490866 63490901 -189765682 + MLT1E LTR MaLR 1 34 -559 1574 163 46 3 chr2 63490901 63491183 -189765400 + AluSg SINE Alu 1 294 -16 1724 235 70 57 chr2 63491183 63491730 -189764853 + MLT1E LTR MaLR 34 591 -2 1928 112 1 61 chr2 63492068 63492574 -189764009 + MER4A LTR ERV1 1 609 -55 6313 35 0 0 chr2 63492574 63493312 -189763271 + L1PA4 LINE L1 5418 6155 0 1928 112 1 61 chr2 63493312 63493362 -189763221 + MER4A LTR ERV1 609 660 -4 226 348 65 0 chr2 63493536 63493628 -189762955 - MIR SINE MIR -76 132 35 1289 235 72 16 chr2 63493677 63494052 -189762531 - L1ME4a LINE L1 -187 5934 5539 431 239 84 65 chr2 63494941 63495096 -189761487 - MLT1J2 LTR MaLR 0 450 293 2371 77 7 3 chr2 63496193 63496503 -189760080 + AluSq SINE Alu 1 311 -2 209 167 0 0 chr2 63496639 63496675 -189759908 - L3 LINE CR1 -14 1563 1528 * 386 318 113 7 chr2 63496643 63496794 -189759789 - MIR3 SINE MIR -22 186 20 22 35 0 0 chr2 63498066 63498095 -189758488 + AT_rich Low_complexity Low_complexity 1 29 0 403 289 197 0 chr2 63498095 63498247 -189758336 + MIR SINE MIR 19 200 -62 1975 120 0 3 chr2 63498649 63498957 -189757626 + AluSx SINE Alu 1 307 0 238 306 231 8 chr2 63499633 63499767 -189756816 - MIR3 SINE MIR -19 189 26 308 349 102 6 chr2 63500515 63500681 -189755902 + MIR SINE MIR 36 217 -45 1560 139 66 4 chr2 63501133 63501407 -189755176 + AluJo SINE Alu 7 297 -15 744 170 144 33 chr2 63501671 63501824 -189754759 - FRAM SINE Alu -7 169 1 2091 103 27 7 chr2 63502603 63502904 -189753679 - AluSx SINE Alu -5 307 1 3599 183 9 37 chr2 63502928 63503356 -189753227 - L1MB4 LINE L1 -1 6179 5780 2133 122 0 3 chr2 63503356 63503668 -189752915 - AluSx SINE Alu -1 311 1 3599 183 9 37 chr2 63503668 63504000 -189752583 - L1MB4 LINE L1 -400 5780 5440 326 294 83 0 chr2 63504286 63504395 -189752188 + MIR SINE MIR 47 164 -98 282 95 0 0 chr2 63507883 63507925 -189748658 + (CA)n Simple_repeat Simple_repeat 2 43 0 778 148 23 0 chr2 63510042 63510170 -189746413 + FLAM_C SINE Alu 2 132 -1 2352 82 0 3 chr2 63510749 63511053 -189745530 + AluSq SINE Alu 1 303 -10 205 261 76 76 chr2 63511425 63511544 -189745039 + L2 LINE L2 3142 3260 -12 310 279 0 0 chr2 63512084 63512152 -189744431 + L2 LINE L2 3205 3272 0 372 303 64 69 chr2 63512497 63512617 -189743966 + MIR SINE MIR 75 195 -67 2250 103 0 0 chr2 63512617 63512917 -189743666 + AluSq SINE Alu 1 300 -13 372 303 64 69 chr2 63512917 63512984 -189743599 + MIR SINE MIR 195 261 -1 2237 102 0 3 chr2 63514419 63514724 -189741859 + AluSx SINE Alu 1 304 -8 277 215 102 183 chr2 63515194 63515380 -189741203 + MIR3 SINE MIR 36 206 -2 28 48 0 0 chr2 63515887 63515929 -189740654 + AT_rich Low_complexity Low_complexity 1 42 0 2087 88 18 0 chr2 63516318 63516642 -189739941 + AluSg SINE Alu 3 331 0 1938 126 0 10 chr2 63516936 63517245 -189739338 + AluY SINE Alu 1 306 -5 268 317 87 0 chr2 63518054 63518158 -189738425 + MIR SINE MIR 30 142 -66 27 49 0 0 chr2 63519443 63519484 -189737099 + AT_rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr2 63520131 63520153 -189736430 + AT_rich Low_complexity Low_complexity 1 22 0 258 32 0 0 chr2 63521107 63521138 -189735445 + (GA)n Simple_repeat Simple_repeat 2 32 0 21 36 0 0 chr2 63522414 63522442 -189734141 + AT_rich Low_complexity Low_complexity 1 28 0 261 0 0 0 chr2 63523708 63523737 -189732846 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 194 83 56 0 chr2 63524437 63524473 -189732110 + A-rich Low_complexity Low_complexity 4 41 0 246 128 0 0 chr2 63524745 63524784 -189731799 + (T)n Simple_repeat Simple_repeat 1 39 0 27 49 0 0 chr2 63525492 63525533 -189731050 + AT_rich Low_complexity Low_complexity 1 41 0 32 26 0 0 chr2 63525922 63525961 -189730622 + AT_rich Low_complexity Low_complexity 1 39 0 186 133 0 0 chr2 63527003 63527033 -189729550 + (TC)n Simple_repeat Simple_repeat 1 30 0 318 148 0 0 chr2 63527238 63527292 -189729291 + (A)n Simple_repeat Simple_repeat 1 54 0 189 0 0 0 chr2 63527340 63527361 -189729222 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 378 151 0 0 chr2 63528474 63528547 -189728036 + CT-rich Low_complexity Low_complexity 1 73 0 183 170 0 106 chr2 63529638 63529685 -189726898 + L2 LINE L2 3223 3264 -8 302 291 13 0 chr2 63529833 63529912 -189726671 + MIR3 SINE MIR 85 164 -44 192 77 0 0 chr2 63532570 63532596 -189723987 + (TTTTA)n Simple_repeat Simple_repeat 5 30 0 444 327 37 12 chr2 63532681 63532843 -189723740 + MIR SINE MIR 46 211 -51 1242 119 0 1 chr2 63534146 63535237 -189721346 + (TGG)n Simple_repeat Simple_repeat 1 1089 0 279 0 0 0 chr2 63537867 63537898 -189718685 + (TTTTTG)n Simple_repeat Simple_repeat 4 34 0 651 289 18 6 chr2 63537898 63538064 -189718519 - MIR3 SINE MIR -21 187 20 819 204 33 11 chr2 63538842 63539023 -189717560 + MER5A DNA MER1_type 2 186 -3 350 280 6 0 chr2 63540103 63540278 -189716305 + (TG)n Simple_repeat Simple_repeat 2 177 0 351 296 79 26 chr2 63540354 63540506 -189716077 + L3 LINE CR1 1392 1551 -26 183 100 0 0 chr2 63541785 63541815 -189714768 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 425 220 61 38 chr2 63541822 63541954 -189714629 - L2 LINE L2 0 3313 3179 537 242 31 39 chr2 63542969 63543097 -189713486 + MIR3 SINE MIR 35 161 -47 1199 74 0 12 chr2 63544636 63544799 -189711784 + L1PA7 LINE L1 5994 6154 0 1463 117 5 14 chr2 63545143 63545365 -189711218 - AluJb SINE Alu -8 304 85 262 204 21 11 chr2 63550974 63551067 -189705516 + CT-rich Low_complexity Low_complexity 3 96 0 222 290 9 37 chr2 63551499 63551606 -189704977 + CT-rich Low_complexity Low_complexity 4 107 0 182 143 0 0 chr2 63553279 63553307 -189703276 + L3b LINE CR1 1276 1303 -280 2219 88 0 0 chr2 63555914 63556237 -189700346 - AluSp SINE Alu 0 323 1 2132 109 6 6 chr2 63558568 63558881 -189697702 + AluSq SINE Alu 1 313 0 1709 144 37 0 chr2 63559275 63559569 -189697014 + AluJb SINE Alu 4 307 0 267 31 0 0 chr2 63559789 63559821 -189696762 + (TC)n Simple_repeat Simple_repeat 2 33 0 1927 255 31 12 chr2 63560000 63560518 -189696065 - L1ME1 LINE L1 -5 6161 5634 386 305 33 7 chr2 63561431 63561582 -189695001 + MIR3 SINE MIR 15 169 -39 444 223 117 0 chr2 63561840 63561943 -189694640 + MIR SINE MIR 128 242 -20 189 0 0 0 chr2 63563954 63563975 -189692608 + (TC)n Simple_repeat Simple_repeat 1 21 0 189 213 0 0 chr2 63564775 63564822 -189691761 + (ATG)n Simple_repeat Simple_repeat 2 48 0 376 265 117 18 chr2 63566621 63566759 -189689824 - MIR SINE MIR -62 146 2 391 300 30 65 chr2 63567931 63568131 -189688452 + MIR SINE MIR 22 214 -48 182 217 167 0 chr2 63568127 63568187 -189688396 + MIR SINE MIR 78 147 -61 * 256 127 0 109 chr2 63568435 63568490 -189688093 - L2 LINE L2 -77 3195 3147 2204 102 13 0 chr2 63568677 63568981 -189687602 - AluSp SINE Alu -5 308 1 274 343 56 21 chr2 63569921 63570064 -189686519 + MIR3 SINE MIR 2 149 -59 31 0 0 0 chr2 63571002 63571033 -189685550 + AT_rich Low_complexity Low_complexity 1 31 0 318 50 0 0 chr2 63574374 63574414 -189682169 + (GGAA)n Simple_repeat Simple_repeat 3 42 0 1037 87 7 0 chr2 63574416 63574566 -189682017 + (GGGGA)n Simple_repeat Simple_repeat 2 152 0 180 0 0 0 chr2 63575386 63575406 -189681177 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1116 267 139 19 chr2 63577052 63577885 -189678698 + L2 LINE L2 2382 3313 0 231 244 77 0 chr2 63579471 63579549 -189677034 + MIR SINE MIR 47 130 -78 185 180 120 0 chr2 63581083 63581133 -189675450 + MIR3 SINE MIR 9 64 -144 2120 97 0 36 chr2 63581546 63581854 -189674729 + AluSx SINE Alu 1 297 -15 192 125 0 0 chr2 63582031 63582063 -189674520 + (A)n Simple_repeat Simple_repeat 1 32 0 234 311 74 16 chr2 63582540 63582662 -189673921 - L2 LINE L2 -23 3290 3162 241 146 0 24 chr2 63583164 63583205 -189673378 - THE1-int LTR MaLR -515 1065 1026 571 316 71 21 chr2 63584044 63584380 -189672203 + L3b LINE CR1 1103 1455 -128 375 308 49 7 chr2 63584841 63584984 -189671599 + MIR3 SINE MIR 25 173 -35 696 211 0 0 chr2 63585182 63585305 -189671278 + FLAM_C SINE Alu 2 124 -19 23 0 0 0 chr2 63585307 63585330 -189671253 + AT_rich Low_complexity Low_complexity 1 23 0 405 0 0 0 chr2 63586711 63586756 -189669827 + (CCTG)n Simple_repeat Simple_repeat 2 46 0 510 31 0 0 chr2 63588239 63588303 -189668280 + (CA)n Simple_repeat Simple_repeat 1 64 0 736 229 43 50 chr2 63589279 63589558 -189667025 - L1MC5 LINE L1 -31 7930 7654 301 257 68 0 chr2 63590712 63590786 -189665797 + L1MC4 LINE L1 6616 6694 -1348 201 132 0 0 chr2 63591631 63591669 -189664914 + (T)n Simple_repeat Simple_repeat 1 38 0 438 275 66 66 chr2 63592763 63592945 -189663638 - MIR3 SINE MIR -11 197 16 249 288 0 15 chr2 63595850 63595916 -189660667 + MIR SINE MIR 82 146 -62 318 307 158 16 chr2 63596042 63596169 -189660414 - MIR SINE MIR -70 192 48 520 283 59 16 chr2 63596404 63596591 -189659992 - MIR SINE MIR 0 262 68 23 0 0 0 chr2 63597500 63597523 -189659060 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr2 63597771 63597797 -189658786 + AT_rich Low_complexity Low_complexity 1 26 0 183 156 0 0 chr2 63597848 63597880 -189658703 + A-rich Low_complexity Low_complexity 1 32 0 31 26 0 0 chr2 63598668 63598706 -189657877 + AT_rich Low_complexity Low_complexity 1 38 0 240 100 0 0 chr2 63599554 63599594 -189656989 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 183 156 0 0 chr2 63599738 63599770 -189656813 + A-rich Low_complexity Low_complexity 1 32 0 223 224 30 15 chr2 63600501 63600568 -189656015 + GA-rich Low_complexity Low_complexity 1 68 0 21 0 0 0 chr2 63604383 63604404 -189652179 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 63604455 63604476 -189652107 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr2 63605892 63605913 -189650670 + (TC)n Simple_repeat Simple_repeat 2 22 0 * 405 0 0 0 chr2 63605912 63605957 -189650626 + (TG)n Simple_repeat Simple_repeat 2 46 0 25 0 0 0 chr2 63606832 63606857 -189649726 + AT_rich Low_complexity Low_complexity 1 25 0 414 0 0 0 chr2 63608119 63608165 -189648418 + (TG)n Simple_repeat Simple_repeat 1 46 0 204 67 0 0 chr2 63609588 63609618 -189646965 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 2391 94 0 3 chr2 63609919 63610226 -189646357 + AluSq SINE Alu 1 306 -7 21 0 0 0 chr2 63611038 63611059 -189645524 + AT_rich Low_complexity Low_complexity 1 21 0 183 162 0 0 chr2 63613725 63613762 -189642821 + (CA)n Simple_repeat Simple_repeat 2 38 0 21 0 0 0 chr2 63615467 63615488 -189641095 + AT_rich Low_complexity Low_complexity 1 21 0 201 216 52 31 chr2 63618930 63619027 -189637556 + (CCGGG)n Simple_repeat Simple_repeat 5 103 0 187 28 56 28 chr2 63619415 63619451 -189637132 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 207 0 0 0 chr2 63619594 63619617 -189636966 + (CGG)n Simple_repeat Simple_repeat 1 23 0 23 33 0 0 chr2 63620141 63620171 -189636412 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr2 63620349 63620377 -189636206 + AT_rich Low_complexity Low_complexity 1 28 0 261 0 0 0 chr2 63620459 63620488 -189636095 + (CGG)n Simple_repeat Simple_repeat 2 30 0 261 0 0 0 chr2 63620655 63620684 -189635899 + (A)n Simple_repeat Simple_repeat 1 29 0 * 317 62 21 0 chr2 63620683 63620731 -189635852 + (GA)n Simple_repeat Simple_repeat 2 50 0 22 0 0 0 chr2 63621706 63621728 -189634855 + GC_rich Low_complexity Low_complexity 1 22 0 265 267 0 0 chr2 63624317 63624392 -189632191 + T-rich Low_complexity Low_complexity 1 75 0 2000 137 27 0 chr2 63624558 63624851 -189631732 + AluSx SINE Alu 1 301 -11 661 122 17 0 chr2 63625096 63625211 -189631372 + GA-rich Low_complexity Low_complexity 3 119 0 29 78 0 0 chr2 63625508 63625572 -189631011 + AT_rich Low_complexity Low_complexity 1 64 0 207 0 0 0 chr2 63626111 63626134 -189630449 + (CA)n Simple_repeat Simple_repeat 2 24 0 516 77 33 0 chr2 63626468 63626559 -189630024 + (TC)n Simple_repeat Simple_repeat 1 94 0 195 139 0 0 chr2 63627300 63627336 -189629247 + (ATGGTG)n Simple_repeat Simple_repeat 4 39 0 359 184 0 31 chr2 63628124 63628222 -189628361 + (ATGGTG)n Simple_repeat Simple_repeat 3 97 0 180 0 0 0 chr2 63629183 63629203 -189627380 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 2078 112 14 10 chr2 63629617 63629912 -189626671 - AluSx SINE Alu -16 296 1 197 200 44 0 chr2 63629930 63629975 -189626608 + L2 LINE L2 3267 3313 0 27 49 0 0 chr2 63630054 63630095 -189626488 + AT_rich Low_complexity Low_complexity 1 41 0 186 43 0 0 chr2 63633474 63633497 -189623086 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 243 0 0 0 chr2 63635098 63635125 -189621458 + (A)n Simple_repeat Simple_repeat 1 27 0 306 0 0 0 chr2 63635994 63636028 -189620555 + (TG)n Simple_repeat Simple_repeat 1 34 0 242 209 44 11 chr2 63636196 63636287 -189620296 + GA-rich Low_complexity Low_complexity 2 95 0 444 37 0 0 chr2 63636791 63636845 -189619738 + (CA)n Simple_repeat Simple_repeat 2 55 0 189 0 0 0 chr2 63637445 63637466 -189619117 + (T)n Simple_repeat Simple_repeat 1 21 0 210 171 0 0 chr2 63640130 63640165 -189616418 + T-rich Low_complexity Low_complexity 1 35 0 2011 124 0 20 chr2 63644331 63644630 -189611953 + AluSx SINE Alu 1 293 -19 224 235 0 0 chr2 63647292 63647343 -189609240 - L2 LINE L2 -8 3305 3255 378 0 0 0 chr2 63647491 63647533 -189609050 + (CA)n Simple_repeat Simple_repeat 1 42 0 878 215 56 0 chr2 63648501 63648696 -189607887 - MER3 DNA MER1_type 0 209 4 22 70 0 0 chr2 63649145 63649188 -189607395 + GC_rich Low_complexity Low_complexity 1 43 0 2163 112 10 0 chr2 63649724 63650018 -189606565 + AluSx SINE Alu 1 297 -15 230 352 0 0 chr2 63651056 63651144 -189605439 + (TG)n Simple_repeat Simple_repeat 1 88 0 303 93 0 0 chr2 63652100 63652143 -189604440 + (TG)n Simple_repeat Simple_repeat 2 44 0 1143 178 56 34 chr2 63653557 63653622 -189602961 - ORSL DNA AcHobo 0 275 213 2143 163 85 59 chr2 63653622 63654114 -189602469 + MLT1D LTR MaLR 1 505 0 1143 178 56 34 chr2 63654114 63654317 -189602266 - ORSL DNA AcHobo -62 213 1 857 300 75 8 chr2 63655304 63655664 -189600919 + L2 LINE L2 1936 2319 -995 379 179 0 51 chr2 63655664 63655742 -189600841 + MLT2F LTR ERVL 1 74 -589 * 1932 117 29 74 chr2 63655735 63655897 -189600686 - MER47A DNA MER2_type -1960 363 224 1258 213 103 0 chr2 63655897 63656040 -189600543 - AluJo SINE Alu -22 290 163 225 0 0 0 chr2 63656040 63656065 -189600518 + (TTTG)n Simple_repeat Simple_repeat 3 27 0 1258 213 103 0 chr2 63656065 63656184 -189600399 - AluJo SINE Alu -149 163 1 1932 117 29 74 chr2 63656184 63656371 -189600212 - MER47A DNA MER2_type -2099 224 30 236 191 43 0 chr2 63656414 63656461 -189600122 - MER47A DNA MER2_type -317 49 1 * 929 252 21 12 chr2 63656461 63656709 -189599874 + MLT2F LTR ERVL 67 360 -303 403 145 24 0 chr2 63656726 63656809 -189599774 + (TA)n Simple_repeat Simple_repeat 1 85 0 2166 129 0 0 chr2 63656826 63657121 -189599462 + AluSx SINE Alu 1 295 -17 180 0 0 0 chr2 63657128 63657148 -189599435 + (TAA)n Simple_repeat Simple_repeat 2 21 0 575 294 23 31 chr2 63657149 63657511 -189599072 + L2 LINE L2 2325 2744 -570 336 174 15 13 chr2 63657526 63657784 -189598799 + AluJb SINE Alu 9 296 -4 623 300 121 39 chr2 63657784 63658303 -189598280 + L2 LINE L2 2741 3303 -10 10959 162 20 26 chr2 63658394 63661411 -189595172 + L1MA4 LINE L1 3295 6296 -4 200 286 122 32 chr2 63661595 63661721 -189594862 + MIR SINE MIR 13 150 -58 2489 157 63 14 chr2 63663677 63663839 -189592744 + MLT1C LTR MaLR 1 154 -313 1554 129 195 66 chr2 63663839 63664169 -189592414 + MSTA LTR MaLR 1 388 -40 2287 104 14 0 chr2 63664169 63664466 -189592117 - AluSx SINE Alu -6 306 6 1554 129 195 66 chr2 63664466 63664514 -189592069 + MSTA LTR MaLR 388 428 0 2489 157 63 14 chr2 63664514 63664796 -189591787 + MLT1C LTR MaLR 154 467 0 1227 177 43 0 chr2 63664826 63665035 -189591548 + MER20 DNA MER1_type 1 218 -1 181 322 44 11 chr2 63665036 63665126 -189591457 - MIR SINE MIR -67 141 49 1096 183 4 102 chr2 63666003 63666121 -189590462 + MER45C DNA AcHobo 2 85 -868 1609 178 3 11 chr2 63666121 63666407 -189590176 - AluJo SINE Alu -24 288 5 1096 183 4 102 chr2 63666407 63666534 -189590049 + MER45C DNA AcHobo 85 223 -730 535 251 114 64 chr2 63666629 63666848 -189589735 + MER45C DNA AcHobo 724 953 0 182 283 0 0 chr2 63667113 63667173 -189589410 - L2 LINE L2 -251 3062 3003 306 298 125 65 chr2 63667210 63667690 -189588893 - L2 LINE L2 -384 2930 2422 1600 233 69 53 chr2 63667732 63668293 -189588290 + MLT1F1 LTR MaLR 1 567 0 1958 144 0 17 chr2 63668385 63668684 -189587899 - AluSx SINE Alu -18 294 1 2192 135 0 0 chr2 63668747 63669051 -189587532 - AluSx SINE Alu -8 304 1 207 410 75 0 chr2 63669142 63669276 -189587307 + L2 LINE L2 3123 3266 -6 209 313 33 60 chr2 63669652 63669802 -189586781 + MIR3 SINE MIR 60 205 -3 22 0 0 0 chr2 63669958 63669980 -189586603 + AT_rich Low_complexity Low_complexity 1 22 0 383 313 20 15 chr2 63671194 63671389 -189585194 - MIR SINE MIR -13 249 54 1532 193 25 79 chr2 63671490 63671894 -189584689 + MLT1B LTR MaLR 9 390 0 359 186 80 87 chr2 63672769 63672945 -189583638 + MIR SINE MIR 85 261 -1 278 159 174 0 chr2 63673057 63673126 -189583457 - L2 LINE L2 -1 3312 3232 2225 81 37 17 chr2 63673663 63673959 -189582624 + AluSc SINE Alu 3 304 -5 1467 203 24 21 chr2 63674139 63674430 -189582153 - AluJb SINE Alu -20 292 1 2140 175 51 16 chr2 63674595 63675046 -189581537 - MLT1C LTR MaLR 0 467 1 399 205 103 8 chr2 63675713 63675830 -189580753 - MIR SINE MIR 0 262 135 261 0 0 0 chr2 63676935 63676964 -189579619 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 834 209 6 13 chr2 63677453 63677611 -189578972 + FRAM SINE Alu 1 150 -26 488 223 30 11 chr2 63678233 63678391 -189578192 + MIR SINE MIR 32 188 -62 635 247 20 0 chr2 63678572 63678718 -189577865 + MIR SINE MIR 47 195 -67 212 222 0 0 chr2 63679350 63679395 -189577188 - L2 LINE L2 -4 3309 3265 186 301 73 32 chr2 63679531 63679654 -189576929 - L2 LINE L2 -229 3043 2916 327 252 7 59 chr2 63679726 63679861 -189576722 - L2 LINE L2 -652 2662 2535 444 298 138 14 chr2 63679866 63680155 -189576428 - L2 LINE L2 -1022 2292 1968 354 226 65 0 chr2 63680158 63680251 -189576332 + L1MB7 LINE L1 5979 6077 -107 * 3022 140 160 130 chr2 63680250 63680602 -189575981 + L1MB3 LINE L1 5254 5594 -740 696 159 0 0 chr2 63680602 63680709 -189575874 + FLAM_C SINE Alu 2 108 -35 3022 140 160 130 chr2 63680709 63680731 -189575852 + L1MB3 LINE L1 5594 5614 -720 365 58 19 0 chr2 63680731 63680783 -189575800 + (TG)n Simple_repeat Simple_repeat 2 54 0 3022 140 160 130 chr2 63680783 63680806 -189575777 + L1MB3 LINE L1 5614 5635 -699 207 0 0 0 chr2 63680806 63680829 -189575754 + (CA)n Simple_repeat Simple_repeat 2 24 0 3022 140 160 130 chr2 63680829 63681174 -189575409 + L1MB3 LINE L1 5635 5968 -366 2277 94 0 17 chr2 63681174 63681472 -189575111 + AluSq SINE Alu 1 293 -20 3022 140 160 130 chr2 63681472 63681668 -189574915 + L1MB3 LINE L1 5968 6334 0 286 236 71 131 chr2 63681676 63682057 -189574526 - L2 LINE L2 -1354 1960 1603 1992 177 8 25 chr2 63682101 63682133 -189574450 - MLT1A1 LTR MaLR -4 361 330 1991 152 0 3 chr2 63682133 63682435 -189574148 + AluJb SINE Alu 1 301 -11 1992 177 8 25 chr2 63682435 63682769 -189573814 - MLT1A1 LTR MaLR -35 330 1 207 88 0 0 chr2 63683249 63683283 -189573300 + (TC)n Simple_repeat Simple_repeat 1 34 0 198 244 0 0 chr2 63683725 63683770 -189572813 + L2 LINE L2 3261 3305 -8 5330 143 9 21 chr2 63683935 63683972 -189572611 - L1MB4 LINE L1 0 6180 6144 6679 120 56 40 chr2 63683972 63684178 -189572405 + Tigger3b DNA MER2_type 4 205 -2823 1629 137 10 68 chr2 63684178 63684470 -189572113 + AluJo SINE Alu 21 295 -17 6679 120 56 40 chr2 63684470 63685020 -189571563 + Tigger3b DNA MER2_type 205 745 -2283 207 0 0 0 chr2 63685020 63685043 -189571540 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1986 141 0 20 chr2 63685046 63685345 -189571238 - AluSx SINE Alu -19 293 1 6679 120 56 40 chr2 63685345 63685792 -189570791 + Tigger3b DNA MER2_type 746 1231 0 5330 143 9 21 chr2 63685792 63686659 -189569924 - L1MB4 LINE L1 -36 6144 5287 2027 125 38 0 chr2 63686688 63686977 -189569606 + AluSx SINE Alu 1 300 -12 2173 113 0 0 chr2 63687247 63687539 -189569044 + AluSx SINE Alu 2 293 -19 1809 140 10 10 chr2 63687553 63687845 -189568738 + MLT1C LTR MaLR 176 467 0 500 209 28 127 chr2 63687922 63688159 -189568424 + L1MD3 LINE L1 6035 6294 -1701 1732 193 3 0 chr2 63688159 63688449 -189568134 + AluJb SINE Alu 1 291 -21 500 209 28 127 chr2 63688449 63688578 -189568005 + L1MD3 LINE L1 6294 7995 0 2143 119 0 3 chr2 63688766 63689060 -189567523 + AluSx SINE Alu 1 293 -19 1551 123 0 0 chr2 63690052 63690255 -189566328 - AluSx SINE Alu -109 203 1 466 202 67 0 chr2 63691482 63691586 -189564997 - L2 LINE L2 0 3313 3203 255 31 0 0 chr2 63692364 63692396 -189564187 + (CA)n Simple_repeat Simple_repeat 2 33 0 2256 128 128 8 chr2 63692500 63692882 -189563701 + MSTA LTR MaLR 1 428 0 2448 85 0 10 chr2 63692959 63693266 -189563317 - AluY SINE Alu -7 304 1 441 242 55 0 chr2 63693796 63693887 -189562696 + MER81 DNA DNA 16 111 -3 517 239 185 5 chr2 63697136 63697358 -189559225 - MIR SINE MIR 0 262 1 194 301 39 48 chr2 63697832 63697888 -189558695 - L2 LINE L2 -1 3271 3215 2126 113 21 61 chr2 63697888 63698267 -189558316 + THE1B LTR MaLR 1 364 0 194 301 39 48 chr2 63698267 63698313 -189558270 - L2 LINE L2 -57 3215 3170 1246 151 4 26 chr2 63698467 63698699 -189557884 - AluJb SINE Alu -1 311 85 273 29 0 0 chr2 63698800 63698834 -189557749 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 633 288 116 8 chr2 63699037 63699304 -189557279 - MER102a DNA MER1_type -34 296 1 1767 156 3 30 chr2 63699419 63699586 -189556997 - AluJb SINE Alu -19 293 123 183 42 0 0 chr2 63699586 63699610 -189556973 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2144 117 0 0 chr2 63699610 63699893 -189556690 - AluSx SINE Alu -29 283 1 1767 156 3 30 chr2 63699893 63700025 -189556558 - AluJb SINE Alu -187 125 1 1822 146 13 20 chr2 63700042 63700344 -189556239 + AluSx SINE Alu 10 309 -3 286 60 20 20 chr2 63701676 63701726 -189554857 + (TAGA)n Simple_repeat Simple_repeat 3 52 0 295 303 120 11 chr2 63702635 63702810 -189553773 - MIR SINE MIR -50 212 19 1752 248 43 39 chr2 63703295 63703788 -189552795 - MLT1J LTR MaLR 0 511 17 230 345 35 0 chr2 63704015 63704102 -189552481 + MIR SINE MIR 23 112 -150 1207 255 191 20 chr2 63704104 63704595 -189551988 - MLT1K LTR MaLR -3 585 11 2338 137 81 31 chr2 63704595 63705017 -189551566 - MSTB2 LTR MaLR 0 457 15 265 309 0 12 chr2 63705051 63705132 -189551451 + MIR SINE MIR 152 231 -31 502 260 78 25 chr2 63705524 63705901 -189550682 - LTR33 LTR ERVL -77 444 4 805 88 80 0 chr2 63706481 63706606 -189549977 - Alu SINE Alu -3 307 173 924 110 0 0 chr2 63706606 63706724 -189549859 - AluSq/x SINE Alu -192 120 3 714 278 106 0 chr2 63706758 63706985 -189549598 + MIR SINE MIR 12 262 0 2074 122 10 0 chr2 63707627 63707923 -189548660 - AluSx SINE Alu -13 299 1 1936 169 3 10 chr2 63708025 63708338 -189548245 + 7SLRNA srpRNA srpRNA 1 311 -9 264 380 12 6 chr2 63708552 63708718 -189547865 - MIR3 SINE MIR -8 200 34 195 307 228 0 chr2 63708753 63708880 -189547703 - L2 LINE L2 -8 3264 3109 585 248 34 58 chr2 63709076 63709329 -189547254 + MIR SINE MIR 5 244 -18 1046 175 189 0 chr2 63709429 63709657 -189546926 + AluJb SINE Alu 40 310 -2 487 280 154 0 chr2 63710003 63710027 -189546556 + MER5B DNA MER1_type 10 29 -149 270 0 0 0 chr2 63710027 63710057 -189546526 + (CA)n Simple_repeat Simple_repeat 1 30 0 487 280 154 0 chr2 63710057 63710175 -189546408 + MER5B DNA MER1_type 29 174 -4 981 301 43 40 chr2 63710269 63710691 -189545892 - MARNA DNA Mariner -133 453 31 327 162 103 0 chr2 63711250 63711318 -189545265 + MADE1 DNA Mariner 6 80 0 423 271 7 64 chr2 63711342 63711389 -189545194 - L2 LINE L2 0 3313 3265 838 209 11 11 chr2 63711389 63711566 -189545017 - MER69A DNA AcHobo 0 177 1 423 271 7 64 chr2 63711566 63711658 -189544925 - L2 LINE L2 -48 3265 3182 590 211 50 19 chr2 63711688 63711849 -189544734 + MER103 DNA DNA 1 166 0 2411 183 40 87 chr2 63712853 63713293 -189543290 + MLT1F1 LTR MaLR 1 407 -160 2059 134 16 0 chr2 63713293 63713600 -189542983 + AluSx SINE Alu 1 312 0 2411 183 40 87 chr2 63713600 63713754 -189542829 + MLT1F1 LTR MaLR 407 567 0 331 219 137 55 chr2 63714787 63714933 -189541650 + MER103 DNA DNA 2 159 -7 1421 108 0 0 chr2 63716666 63716879 -189539704 + L1MA8 LINE L1 6068 6280 -11 258 111 0 0 chr2 63717051 63717087 -189539496 - MER5A DNA MER1_type 0 189 154 839 169 0 22 chr2 63717101 63717284 -189539299 + GA-rich Low_complexity Low_complexity 2 180 0 204 238 0 0 chr2 63717295 63717337 -189539246 + A-rich Low_complexity Low_complexity 4 45 0 212 322 105 20 chr2 63717836 63717988 -189538595 - L2 LINE L2 -218 3054 2890 1753 170 32 0 chr2 63718525 63718808 -189537775 + AluJb SINE Alu 1 292 -20 244 279 29 15 chr2 63718811 63718947 -189537636 + L1M4 LINE L1 2211 2348 -3798 1509 268 82 6 chr2 63719170 63719648 -189536935 - MLT1G1 LTR MaLR -42 553 40 510 17 0 0 chr2 63719690 63719749 -189536834 + (CA)n Simple_repeat Simple_repeat 1 59 0 1658 179 62 45 chr2 63719764 63720166 -189536417 + MLT1C LTR MaLR 59 467 0 216 333 16 8 chr2 63721296 63721419 -189535164 + GA-rich Low_complexity Low_complexity 6 129 0 460 277 98 22 chr2 63721871 63722055 -189534528 - MIR SINE MIR -62 200 3 232 234 0 0 chr2 63722176 63722223 -189534360 + MLT1D LTR MaLR 445 491 -14 1708 84 189 0 chr2 63722268 63722517 -189534066 + AluSx SINE Alu 1 296 -16 353 240 100 10 chr2 63722546 63722646 -189533937 - MIR SINE MIR -72 136 28 418 288 38 23 chr2 63723678 63723810 -189532773 + MIR SINE MIR 19 152 -110 960 143 0 0 chr2 63724828 63724961 -189531622 + AluSq/x SINE Alu 1 133 -180 530 129 12 0 chr2 63724964 63725049 -189531534 + AluS SINE Alu 222 307 -3 1098 195 10 10 chr2 63725057 63725262 -189531321 + MLT1E3 LTR MaLR 420 624 0 2185 109 50 39 chr2 63725530 63725888 -189530695 + THE1B LTR MaLR 3 364 0 437 299 52 10 chr2 63726691 63726885 -189529698 + L1ME4a LINE L1 5713 5914 -207 367 222 241 0 chr2 63726963 63727071 -189529512 - MER94 DNA DNA 0 134 1 299 130 0 0 chr2 63727138 63727184 -189529399 + MADE1 DNA Mariner 1 46 -34 261 231 103 13 chr2 63727352 63727430 -189529153 - L2 LINE L2 -28 3244 3160 494 243 129 0 chr2 63727452 63727592 -189528991 - MIR SINE MIR -28 234 77 838 146 0 29 chr2 63728056 63728193 -189528390 - FLAM_C SINE Alu 0 133 1 648 223 29 29 chr2 63728283 63728458 -189528125 + MER69A DNA AcHobo 1 175 -2 180 278 237 0 chr2 63729410 63729507 -189527076 + L2 LINE L2 3193 3312 -1 5107 145 43 15 chr2 63730511 63731439 -189525144 - L1MB8 LINE L1 0 6178 5234 2343 106 21 26 chr2 63731604 63731981 -189524602 + THE1C LTR MaLR 1 375 0 2366 95 3 9 chr2 63732127 63732442 -189524141 + AluSq SINE Alu 1 313 0 521 227 0 0 chr2 63733029 63733126 -189523457 - MIR SINE MIR -153 109 13 2272 116 0 3 chr2 63733269 63733570 -189523013 + AluSx SINE Alu 1 300 -12 5359 201 59 51 chr2 63733659 63734483 -189522100 + Charlie1a DNA MER1_type 31 847 -1914 2233 124 0 0 chr2 63734483 63734789 -189521794 + AluY SINE Alu 1 306 -5 2247 117 0 3 chr2 63734797 63735097 -189521486 + AluSq SINE Alu 1 299 -14 5359 201 59 51 chr2 63735097 63735290 -189521293 + Charlie1a DNA MER1_type 853 1043 -1718 2236 130 13 0 chr2 63735290 63735598 -189520985 - AluSq SINE Alu -1 312 1 5359 201 59 51 chr2 63735598 63735827 -189520756 + Charlie1a DNA MER1_type 1043 1302 -1459 2347 97 0 0 chr2 63735827 63736127 -189520456 - AluY SINE Alu -11 300 1 5359 201 59 51 chr2 63736127 63736283 -189520300 + Charlie1a DNA MER1_type 1302 1455 0 1752 113 0 131 chr2 63736398 63736742 -189519841 + AluSc SINE Alu 1 299 -10 189 0 0 0 chr2 63736798 63736819 -189519764 + (TG)n Simple_repeat Simple_repeat 2 22 0 249 263 50 10 chr2 63736846 63736945 -189519638 + MER103 DNA DNA 56 158 -8 2377 91 0 0 chr2 63736997 63737295 -189519288 + AluSg SINE Alu 1 298 -12 358 275 38 46 chr2 63737332 63737463 -189519120 - MIR3 SINE MIR -48 160 31 887 130 97 7 chr2 63737463 63737617 -189518966 + AluSg/x SINE Alu 133 300 -9 2103 121 0 0 chr2 63737660 63737961 -189518622 + AluSx SINE Alu 1 301 0 1097 122 0 0 chr2 63738488 63738635 -189517948 - AluSq/x SINE Alu -165 147 1 1086 150 50 0 chr2 63738635 63738815 -189517768 - MLT2B1 LTR ERVL -56 464 276 226 47 70 0 chr2 63738816 63738859 -189517724 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 314 77 0 0 chr2 63738859 63738898 -189517685 + MLT2B2 LTR ERVL 476 514 -1 266 343 57 0 chr2 63739435 63739540 -189517043 - MIR SINE MIR -102 160 50 1940 142 0 0 chr2 63739540 63739815 -189516768 + AluSp SINE Alu 1 275 -38 198 0 0 0 chr2 63739924 63739946 -189516637 + (T)n Simple_repeat Simple_repeat 1 22 0 584 126 0 39 chr2 63740009 63740112 -189516471 - AluS SINE Alu -214 99 1 1040 152 55 60 chr2 63740113 63740330 -189516253 + MER2 DNA MER2_type 127 342 -3 749 241 254 0 chr2 63740335 63740650 -189515933 - L2 LINE L2 -1086 2228 1834 824 293 43 77 chr2 63741331 63741482 -189515101 + HAL1 LINE L1 34 189 -2318 1995 119 3 11 chr2 63741482 63741788 -189514795 + AluSx SINE Alu 1 304 0 824 293 43 77 chr2 63741788 63742052 -189514531 + HAL1 LINE L1 189 436 -2071 2446 142 80 7 chr2 63742159 63742595 -189513988 + LTR18B LTR ERVL 147 614 0 2329 81 7 16 chr2 63742758 63743067 -189513516 - AluSc SINE Alu -3 306 1 2331 104 3 0 chr2 63744046 63744343 -189512240 - AluSx SINE Alu -14 298 1 649 176 0 0 chr2 63744347 63744455 -189512128 - FAM SINE Alu -14 171 64 1729 99 4 0 chr2 63744457 63744689 -189511894 + MER48 LTR ERV1 1 233 -154 839 221 34 131 chr2 63744886 63745139 -189511444 + L1MC4a LINE L1 5392 5591 -2217 1098 15 0 15 chr2 63745139 63745269 -189511314 - L1PA4 LINE L1 -8 6147 6020 839 221 34 131 chr2 63745269 63745427 -189511156 + L1MC4a LINE L1 5591 5763 -2045 243 0 0 0 chr2 63745438 63745465 -189511118 + (A)n Simple_repeat Simple_repeat 1 27 0 2422 97 3 0 chr2 63745491 63745802 -189510781 + AluSq SINE Alu 1 312 -1 274 189 0 0 chr2 63745817 63745870 -189510713 + L1MC4a LINE L1 5881 5933 -1875 1575 189 38 25 chr2 63745882 63746199 -189510384 + MLT2F LTR ERVL 1 321 -342 189 0 0 0 chr2 63746201 63746222 -189510361 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2251 94 0 0 chr2 63746225 63746511 -189510072 - AluY SINE Alu -25 286 1 1937 129 14 7 chr2 63746800 63747136 -189509447 + AluSx SINE Alu 1 338 0 21 0 0 0 chr2 63747320 63747341 -189509242 + AT_rich Low_complexity Low_complexity 1 21 0 1448 94 214 13 chr2 63747388 63747622 -189508961 - AluSg1 SINE Alu -18 291 11 1435 103 0 0 chr2 63748243 63748427 -189508156 + AluSx SINE Alu 2 185 -127 369 161 0 0 chr2 63748557 63748613 -189507970 + AluSg/x SINE Alu 219 274 -26 742 77 0 17 chr2 63748613 63748730 -189507853 + (GGAA)n Simple_repeat Simple_repeat 3 117 0 961 103 5 27 chr2 63748779 63748963 -189507620 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 603 230 170 37 chr2 63748963 63749233 -189507350 + HAL1 LINE L1 2187 2492 -15 24 32 0 0 chr2 63749272 63749303 -189507280 + AT_rich Low_complexity Low_complexity 1 31 0 2535 52 3 3 chr2 63750088 63750394 -189506189 - AluY SINE Alu -5 306 1 222 250 105 0 chr2 63750490 63750566 -189506017 - L2 LINE L2 -1524 1790 1707 218 157 0 39 chr2 63750584 63750635 -189505948 + CT-rich Low_complexity Low_complexity 2 50 0 884 141 0 40 chr2 63750704 63750853 -189505730 - FLAM_C SINE Alu 0 143 1 581 307 104 7 chr2 63750864 63751151 -189505432 - L2 LINE L2 -1611 1703 1389 1090 169 0 0 chr2 63751155 63751321 -189505262 + FRAM SINE Alu 1 165 -11 1824 148 4 0 chr2 63751321 63751585 -189504998 + AluSx SINE Alu 17 281 -31 373 191 0 0 chr2 63751585 63751648 -189504935 - AluJ/FLAM SINE Alu -239 63 1 28 71 0 0 chr2 63751661 63751717 -189504866 + AT_rich Low_complexity Low_complexity 1 56 0 24 0 0 0 chr2 63751831 63751855 -189504728 + AT_rich Low_complexity Low_complexity 1 24 0 381 289 0 0 chr2 63752018 63752132 -189504451 - L1ME3A LINE L1 -9 6161 6048 539 145 0 0 chr2 63752146 63752229 -189504354 + FLAM SINE Alu 44 126 -17 1644 189 7 20 chr2 63752244 63752545 -189504038 + AluJo SINE Alu 4 300 -12 403 193 144 64 chr2 63752677 63752879 -189503704 + L1ME3 LINE L1 5944 6161 -1 1489 198 117 3 chr2 63752896 63753254 -189503329 - L1ME3A LINE L1 -218 5952 5554 727 186 0 0 chr2 63753254 63753378 -189503205 - AluJo/FRAM SINE Alu -8 304 181 1528 165 4 0 chr2 63753381 63753617 -189502966 - AluSx SINE Alu -75 237 1 1050 189 71 55 chr2 63753629 63753883 -189502700 - L1MC4 LINE L1 -155 7887 7630 497 169 0 0 chr2 63753918 63754001 -189502582 + FLAM SINE Alu 49 131 -12 676 212 139 46 chr2 63754029 63754150 -189502433 - MER21A LTR ERV1 -61 870 762 524 96 0 0 chr2 63754150 63754223 -189502360 + L1MA2 LINE L1 6226 6298 -6 201 138 0 0 chr2 63754225 63754254 -189502329 + (TGAA)n Simple_repeat Simple_repeat 4 32 0 676 212 139 46 chr2 63754254 63754403 -189502180 - MER21A LTR ERV1 -169 762 461 318 129 0 97 chr2 63754403 63754434 -189502149 + Alu SINE Alu 1 25 -275 2612 96 0 48 chr2 63754434 63754828 -189501755 - MER51B LTR ERV1 0 377 3 318 129 0 97 chr2 63754828 63754858 -189501725 + Alu SINE Alu 25 56 -244 295 259 5 49 chr2 63754961 63755146 -189501437 + A-rich Low_complexity Low_complexity 3 179 0 404 310 91 49 chr2 63755146 63755433 -189501150 + HAL1 LINE L1 896 3343 -1205 1361 91 0 0 chr2 63755441 63755627 -189500956 + AluSg/x SINE Alu 119 304 -8 1451 146 119 8 chr2 63755639 63755900 -189500683 + AluSg1 SINE Alu 2 291 -18 540 235 17 0 chr2 63755901 63756020 -189500563 - MER21B LTR ERV1 -401 462 342 27 49 0 0 chr2 63756047 63756088 -189500495 + AT_rich Low_complexity Low_complexity 1 41 0 225 233 0 0 chr2 63757415 63757505 -189499078 + (CGG)n Simple_repeat Simple_repeat 3 92 0 536 199 37 37 chr2 63757635 63757771 -189498812 - MER21B LTR ERV1 -630 233 98 317 238 107 0 chr2 63757810 63757894 -189498689 - MER21B LTR ERV1 -768 95 3 245 159 0 0 chr2 63757894 63757938 -189498645 - L1MC4 LINE L1 -411 7631 7588 2123 92 16 25 chr2 63757938 63758254 -189498329 - AluSp SINE Alu 0 313 1 458 255 97 40 chr2 63758273 63758571 -189498012 - L1M4 LINE L1 -1861 4285 3971 1875 153 3 0 chr2 63758584 63758879 -189497704 - AluSx SINE Alu -10 302 7 1104 189 213 4 chr2 63758903 63759027 -189497556 - AluSx SINE Alu -1 301 204 1790 157 0 16 chr2 63759027 63759355 -189497228 - AluSx SINE Alu 0 312 1 1104 189 213 4 chr2 63759355 63759479 -189497104 - AluSx SINE Alu -98 204 1 1898 132 27 0 chr2 63759483 63759779 -189496804 - AluSx SINE Alu -7 305 2 221 87 29 87 chr2 63759900 63759969 -189496614 + (TAAAAA)n Simple_repeat Simple_repeat 2 66 0 854 279 110 25 chr2 63759974 63760419 -189496164 - L2 LINE L2 -1916 1398 916 2176 103 3 0 chr2 63760681 63760982 -189495601 - AluSx SINE Alu -10 302 1 2302 83 0 3 chr2 63761286 63761587 -189494996 + AluY SINE Alu 1 300 -11 1541 200 53 25 chr2 63761934 63761988 -189494595 + MLT1A1 LTR MaLR 1 52 -313 2219 118 131 13 chr2 63761988 63762370 -189494213 + MSTA LTR MaLR 2 428 0 1541 200 53 25 chr2 63762370 63762670 -189493913 + MLT1A1 LTR MaLR 52 365 0 517 239 87 14 chr2 63762674 63762812 -189493771 + MLT1J LTR MaLR 25 172 -339 579 232 88 39 chr2 63762890 63763071 -189493512 + MLT1J LTR MaLR 321 510 -1 2069 110 3 3 chr2 63763234 63763533 -189493050 + AluSx SINE Alu 1 299 -13 2057 128 0 0 chr2 63764209 63764506 -189492077 + AluSg SINE Alu 1 297 -13 1877 156 0 0 chr2 63764635 63764930 -189491653 + AluSx SINE Alu 1 295 -17 1859 120 60 0 chr2 63765653 63765936 -189490647 + AluSg SINE Alu 1 300 -10 550 64 0 3 chr2 63765946 63766179 -189490404 + AluY SINE Alu 1 295 -16 1618 123 84 0 chr2 63767701 63767990 -189488593 - AluJb SINE Alu 0 311 1 1972 126 7 0 chr2 63768034 63768335 -189488248 + AluSx SINE Alu 1 303 -9 370 172 129 21 chr2 63768390 63768483 -189488100 - AluS SINE Alu -227 73 2 914 205 115 101 chr2 63768487 63768862 -189487721 + MLT1J2 LTR MaLR 71 450 0 1005 243 43 20 chr2 63769042 63769297 -189487286 + MIR SINE MIR 2 262 0 2130 97 0 13 chr2 63769674 63769972 -189486611 - AluSq SINE Alu -19 294 1 3024 154 26 9 chr2 63770168 63770713 -189485870 - L1MB4 LINE L1 -2 6178 5625 1987 126 13 10 chr2 63770862 63771164 -189485419 - THE1C LTR MaLR -72 303 1 4275 138 29 48 chr2 63771520 63772268 -189484315 + MER50 LTR ERV1 1 734 0 309 148 0 148 chr2 63772270 63772351 -189484232 - MER50 LTR ERV1 -415 319 251 28 0 0 0 chr2 63772351 63772379 -189484204 + AT_rich Low_complexity Low_complexity 1 28 0 2190 103 0 10 chr2 63772379 63772689 -189483894 - AluSg SINE Alu -3 307 1 1609 122 8 30 chr2 63772689 63772952 -189483631 - MER50 LTR ERV1 -471 263 7 231 186 57 14 chr2 63772973 63773043 -189483540 + LTR33 LTR ERVL 1 73 -448 480 284 58 24 chr2 63773205 63773413 -189483170 + LTR33 LTR ERVL 304 518 -3 1883 144 3 31 chr2 63773567 63773886 -189482697 - AluSx SINE Alu 0 312 3 1996 102 3 40 chr2 63774009 63774295 -189482288 + AluSp SINE Alu 1 275 -38 423 0 0 0 chr2 63774295 63774342 -189482241 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 1996 102 3 40 chr2 63774342 63774379 -189482204 + AluSp SINE Alu 275 312 -1 2032 82 82 0 chr2 63774407 63774689 -189481894 + AluY SINE Alu 1 305 -6 423 260 36 87 chr2 63774690 63774909 -189481674 - L2 LINE L2 -160 3112 2905 618 132 22 0 chr2 63774915 63775006 -189481577 + U6 snRNA snRNA 8 100 -7 32 0 0 0 chr2 63775014 63775046 -189481537 + AT_rich Low_complexity Low_complexity 1 32 0 2119 95 3 0 chr2 63775048 63775365 -189481218 + AluSp SINE Alu 1 318 0 1992 123 3 7 chr2 63775370 63775680 -189480903 + AluSx SINE Alu 1 309 -3 1960 139 0 0 chr2 63775688 63775982 -189480601 + AluSx SINE Alu 1 294 -18 277 293 57 9 chr2 63776080 63776186 -189480397 + Charlie7 DNA MER1_type 1 111 -2501 462 93 9 167 chr2 63776195 63776249 -189480334 + MSTC LTR MaLR 4 34 -394 758 199 8 0 chr2 63776249 63776380 -189480203 + FLAM_C SINE Alu 2 133 0 462 93 9 167 chr2 63776380 63776433 -189480150 + MSTC LTR MaLR 34 94 -334 2154 106 7 0 chr2 63776439 63776732 -189479851 + AluSx SINE Alu 3 297 -15 427 134 0 0 chr2 63776732 63776799 -189479784 + MSTC LTR MaLR 362 428 0 26 0 0 0 chr2 63776861 63776887 -189479696 + AT_rich Low_complexity Low_complexity 1 26 0 1414 188 43 3 chr2 63777066 63777348 -189479235 - AluJb SINE Alu -19 293 1 725 117 10 0 chr2 63777348 63777451 -189479132 - AluSq/x SINE Alu -177 135 32 1433 164 90 8 chr2 63777453 63777721 -189478862 - AluJb SINE Alu -17 295 6 285 128 18 184 chr2 63777722 63777763 -189478820 - L1MC/D LINE L1 -568 5954 5940 1772 141 20 14 chr2 63777763 63778060 -189478523 + AluSx SINE Alu 1 299 -13 285 128 18 184 chr2 63778060 63778127 -189478456 - L1MC/D LINE L1 -582 5940 5864 914 177 0 0 chr2 63778151 63778315 -189478268 + AluSg/x SINE Alu 142 305 -7 536 145 0 152 chr2 63778323 63778353 -189478230 + AluJo/FLAM SINE Alu 6 39 -273 2145 89 0 7 chr2 63778353 63778646 -189477937 - AluSg SINE Alu -11 299 9 536 145 0 152 chr2 63778646 63778760 -189477823 + AluJo/FLAM SINE Alu 39 128 -184 4204 211 52 38 chr2 63778767 63779894 -189476689 - L1MC/D LINE L1 -660 5862 4707 1552 169 39 7 chr2 63779894 63780173 -189476410 - AluSx SINE Alu -24 288 1 4204 211 52 38 chr2 63780173 63780598 -189475985 - L1MC/D LINE L1 -1815 4707 4289 2094 159 77 31 chr2 63780606 63780823 -189475760 + LTR47A LTR ERVL 19 225 -227 2231 98 0 13 chr2 63780823 63780958 -189475625 + AluSx SINE Alu 1 136 -176 2161 112 3 3 chr2 63780958 63781270 -189475313 + AluSp SINE Alu 2 313 0 2231 98 0 13 chr2 63781270 63781439 -189475144 + AluSx SINE Alu 136 301 -11 2094 159 77 31 chr2 63781439 63781636 -189474947 + LTR47A LTR ERVL 225 452 0 804 142 0 0 chr2 63781688 63781837 -189474746 - FRAM SINE Alu 0 175 27 786 187 22 90 chr2 63781837 63782104 -189474479 - L1MC/D LINE L1 -2214 4212 3964 1591 191 0 0 chr2 63782121 63782420 -189474163 + AluSx SINE Alu 13 311 -1 1996 114 3 13 chr2 63782546 63782852 -189473731 + AluSx SINE Alu 1 303 -9 2079 90 11 0 chr2 63783121 63783399 -189473184 - AluSg SINE Alu -29 281 1 862 195 6 18 chr2 63783400 63783564 -189473019 - FRAM SINE Alu -4 162 1 404 274 22 74 chr2 63783777 63784007 -189472576 - L1MCa LINE L1 -4590 1836 1474 2144 111 0 10 chr2 63784007 63784313 -189472270 - AluSq SINE Alu -10 303 1 335 276 65 32 chr2 63785830 63785953 -189470630 + L2 LINE L2 3125 3251 -21 1667 128 72 21 chr2 63785962 63786252 -189470331 + AluJo SINE Alu 1 305 -7 2173 93 3 16 chr2 63786308 63786619 -189469964 + AluY SINE Alu 1 307 -4 1328 156 53 8 chr2 63786711 63786954 -189469629 + MER33 DNA MER1_type 2 255 -69 1705 165 7 3 chr2 63786969 63787266 -189469317 + AluJo SINE Alu 1 298 -14 803 170 0 0 chr2 63787276 63787411 -189469172 + FLAM_C SINE Alu 7 141 -2 246 269 0 0 chr2 63787419 63787486 -189469097 + MER33 DNA MER1_type 297 363 0 281 355 22 22 chr2 63787928 63788066 -189468517 - MER5A DNA MER1_type -1 188 51 180 220 135 156 chr2 63787966 63788107 -189468476 + MER5A DNA MER1_type 50 187 -2 * 249 310 0 0 chr2 63788176 63788234 -189468349 - MER5A DNA MER1_type -83 106 49 240 86 0 0 chr2 63788234 63788269 -189468314 + (CTG)n Simple_repeat Simple_repeat 3 37 0 2178 71 0 10 chr2 63788981 63789317 -189467266 - AluY SINE Alu 0 311 1 629 208 0 40 chr2 63791206 63791331 -189465252 - Charlie1 DNA MER1_type -2641 120 1 2150 109 0 3 chr2 63791350 63791644 -189464939 - AluSp SINE Alu -20 293 1 348 316 32 45 chr2 63791674 63791829 -189464754 + L2 LINE L2 3161 3313 0 2135 92 0 0 chr2 63792740 63793071 -189463512 - AluSx SINE Alu 0 331 1 505 285 143 7 chr2 63793088 63793453 -189463130 - L2 LINE L2 -207 3106 2688 868 162 27 0 chr2 63793454 63793602 -189462981 + FRAM SINE Alu 1 151 -25 783 245 23 153 chr2 63793621 63793845 -189462738 - L2 LINE L2 -612 2702 2585 800 147 47 16 chr2 63793845 63793974 -189462609 - FLAM_C SINE Alu 0 133 1 783 245 23 153 chr2 63793974 63794279 -189462304 - L2 LINE L2 -729 2585 2242 745 122 8 84 chr2 63794295 63794378 -189462205 + MER2 DNA MER2_type 15 86 -259 1581 159 48 14 chr2 63794378 63794667 -189461916 + AluJb SINE Alu 1 299 -13 745 122 8 84 chr2 63794667 63794714 -189461869 + MER2 DNA MER2_type 86 135 -210 234 35 0 0 chr2 63794832 63794861 -189461722 - LTR18B LTR ERVL -584 30 2 3890 199 69 4 chr2 63795034 63795761 -189460822 - HERVL18 LTR ERVL -2556 3491 2718 680 157 12 12 chr2 63795758 63795984 -189460599 - HERVL18 LTR ERVL -3595 2452 2119 * 1096 213 12 11 chr2 63795983 63796326 -189460257 - HERVL18 LTR ERVL -4237 1810 1404 314 130 0 0 chr2 63796339 63796385 -189460198 - HERVL18 LTR ERVL -5085 962 917 * 697 249 11 28 chr2 63796380 63796557 -189460026 - HERVL18 LTR ERVL -5381 666 493 * 1582 204 0 3 chr2 63796542 63796827 -189459756 - HERVL18 LTR ERVL -5745 302 19 3470 140 66 7 chr2 63796847 63797425 -189459158 - LTR18B LTR ERVL -2 612 1 1352 149 54 68 chr2 63797784 63798079 -189458504 + AluJb SINE Alu 3 293 -19 309 217 205 0 chr2 63798998 63799081 -189457502 - L2 LINE L2 -4 3309 3210 2097 118 3 0 chr2 63799127 63799424 -189457159 - AluSq SINE Alu -15 298 1 1381 171 6 76 chr2 63799711 63800026 -189456557 + AluJo SINE Alu 3 295 -17 317 250 14 28 chr2 63800170 63800242 -189456341 + HAL1b LINE L1 637 707 -641 406 164 11 173 chr2 63800306 63800506 -189456077 + L1M1 LINE L1 5313 5480 -823 2137 121 0 0 chr2 63800511 63800808 -189455775 + AluSx SINE Alu 1 297 -15 404 240 26 33 chr2 63800814 63800929 -189455654 + L1MC4 LINE L1 6916 7023 -972 1896 141 3 7 chr2 63800929 63801227 -189455356 + AluSx SINE Alu 1 297 -15 404 240 26 33 chr2 63801227 63801285 -189455298 + L1MC4 LINE L1 7023 7080 -915 611 267 94 62 chr2 63801411 63801909 -189454674 + L1MC4 LINE L1 7102 7615 -427 638 176 17 8 chr2 63801919 63802038 -189454545 + L1MC1 LINE L1 6209 6328 -5 1186 75 11 46 chr2 63802038 63802212 -189454371 - AluSg/x SINE Alu -13 299 132 279 141 64 39 chr2 63802492 63802570 -189454013 + L1MC5 LINE L1 7853 7932 -29 628 189 24 24 chr2 63802570 63802697 -189453886 - FLAM_C SINE Alu -6 127 1 2187 101 0 16 chr2 63802708 63803026 -189453557 - AluSq SINE Alu 0 313 1 1384 167 51 14 chr2 63803054 63803347 -189453236 - AluSx SINE Alu -1 311 8 437 244 15 23 chr2 63803398 63803529 -189453054 + AluSq/x SINE Alu 6 135 -178 1885 151 3 0 chr2 63803683 63803981 -189452602 + AluSq SINE Alu 1 299 -14 1816 116 17 40 chr2 63804074 63804376 -189452207 - AluSg SINE Alu -15 295 1 1926 109 25 0 chr2 63804387 63804661 -189451922 - AluSx SINE Alu -26 286 6 657 100 0 0 chr2 63804663 63804753 -189451830 + THE1C LTR MaLR 286 375 0 607 170 13 92 chr2 63804905 63804957 -189451626 - MIR SINE MIR -19 243 189 2007 125 3 13 chr2 63804957 63805261 -189451322 - AluSx SINE Alu -11 301 1 607 170 13 92 chr2 63805261 63805361 -189451222 - MIR SINE MIR -73 189 103 1431 164 5 5 chr2 63805469 63805689 -189450894 - AluSg/x SINE Alu -24 286 67 2428 103 53 39 chr2 63805689 63806048 -189450535 - THE1B LTR MaLR 0 364 1 5363 99 1 19 chr2 63806052 63806126 -189450457 - THE1B-int LTR MaLR -5 1575 1501 2403 82 0 0 chr2 63806126 63806420 -189450163 - AluY SINE Alu -17 294 1 5363 99 1 19 chr2 63806420 63807071 -189449512 - THE1B-int LTR MaLR -79 1501 863 216 0 0 0 chr2 63807071 63807095 -189449488 + (A)n Simple_repeat Simple_repeat 1 24 0 2411 74 7 0 chr2 63807095 63807391 -189449192 + AluSp SINE Alu 1 298 -15 2386 43 0 4 chr2 63807424 63807703 -189448880 + AluY SINE Alu 17 294 -17 1064 228 129 27 chr2 63808213 63808625 -189447958 + MLT1C LTR MaLR 6 459 -8 803 159 310 0 chr2 63808665 63808891 -189447692 - MER90 LTR ERV1 -318 296 1 1093 185 35 4 chr2 63808891 63809123 -189447460 + Charlie1 DNA MER1_type 2367 2605 -156 812 149 8 0 chr2 63809135 63809256 -189447327 - FLAM_C SINE Alu -11 132 11 593 168 27 41 chr2 63809257 63809467 -189447116 + Charlie1 DNA MER1_type 2588 2760 -1 1766 115 127 0 chr2 63809584 63809844 -189446739 - AluSx SINE Alu -14 298 6 327 339 8 0 chr2 63809870 63809991 -189446592 + MIR SINE MIR 57 178 -84 1956 140 40 0 chr2 63810868 63811168 -189445415 - AluSx SINE Alu 0 312 1 1779 150 7 7 chr2 63811209 63811502 -189445081 - AluSx SINE Alu -19 293 1 214 319 121 25 chr2 63811526 63811683 -189444900 + L3 LINE CR1 1322 1493 -84 494 341 165 21 chr2 63812035 63812410 -189444173 - L2 LINE L2 -77 3236 2808 1890 129 0 17 chr2 63812494 63812816 -189443767 - AluSx SINE Alu 0 317 1 26 30 0 0 chr2 63812818 63812851 -189443732 + AT_rich Low_complexity Low_complexity 1 33 0 227 250 23 34 chr2 63813889 63813977 -189442606 + AluS SINE Alu 3 89 -214 258 158 10 99 chr2 63813978 63814079 -189442504 + 7SLRNA srpRNA srpRNA 10 101 -219 1419 123 23 9 chr2 63814132 63814351 -189442232 - AluSx SINE Alu -90 222 1 639 184 0 64 chr2 63814359 63814500 -189442083 - FLAM_C SINE Alu 0 133 2 1670 149 4 14 chr2 63814529 63814836 -189441747 - AluJo SINE Alu 0 313 10 198 167 0 0 chr2 63816593 63816629 -189439954 + (CA)n Simple_repeat Simple_repeat 2 37 0 500 308 78 12 chr2 63816881 63817203 -189439380 - L1ME3A LINE L1 -220 5950 5608 207 0 0 0 chr2 63817713 63817736 -189438847 + (T)n Simple_repeat Simple_repeat 1 23 0 2434 88 0 3 chr2 63817807 63818113 -189438470 - AluSq SINE Alu -8 305 1 2237 103 3 0 chr2 63818471 63818772 -189437811 + AluSx SINE Alu 1 302 -10 1631 247 160 31 chr2 63819725 63820604 -189435979 - L2 LINE L2 -2 3311 2324 183 80 0 0 chr2 63821075 63821100 -189435483 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 346 259 54 0 chr2 63821427 63821539 -189435044 + Charlie8 DNA MER1_type 85 202 -2215 1088 223 51 69 chr2 63821780 63822012 -189434571 + MER2 DNA MER2_type 1 235 -110 2196 117 0 0 chr2 63822012 63822311 -189434272 - AluSx SINE Alu -13 299 1 450 183 144 29 chr2 63822314 63822451 -189434132 - FLAM_C SINE Alu 0 149 1 1671 184 0 23 chr2 63822456 63822766 -189433817 - AluJo SINE Alu -9 303 1 1088 223 51 69 chr2 63822766 63822871 -189433712 + MER2 DNA MER2_type 241 344 -1 2125 144 0 0 chr2 63822889 63823188 -189433395 - AluSx SINE Alu -13 299 1 2082 129 3 0 chr2 63823192 63823487 -189433096 - AluSx SINE Alu -16 296 1 1915 153 0 29 chr2 63823802 63824110 -189432473 - AluSx SINE Alu -13 299 1 1404 194 0 55 chr2 63824476 63824765 -189431818 - AluJo SINE Alu -39 273 1 806 147 7 77 chr2 63824778 63824921 -189431662 - FLAM_C SINE Alu 0 133 1 834 149 16 16 chr2 63825220 63825341 -189431242 + FLAM_A SINE Alu 2 122 -11 182 240 110 82 chr2 63825689 63825766 -189430817 - L2 LINE L2 -213 3059 2986 1500 191 0 52 chr2 63825766 63826095 -189430488 + AluJo SINE Alu 1 312 0 182 240 110 82 chr2 63826095 63826163 -189430420 - L2 LINE L2 -286 2986 2910 1260 189 185 0 chr2 63826726 63826980 -189429603 - AluJb SINE Alu -1 301 1 2164 127 3 0 chr2 63827486 63827786 -189428797 - AluSq SINE Alu -12 301 1 296 243 39 39 chr2 63827994 63828097 -189428486 - L1ME4a LINE L1 -67 6054 5952 543 293 35 47 chr2 63828418 63828650 -189427933 + MIR SINE MIR 11 239 -23 203 286 48 48 chr2 63828707 63828791 -189427792 - L2 LINE L2 -3 3269 3186 2947 66 14 3 chr2 63829137 63829500 -189427083 - L1PA8 LINE L1 -1 6171 5805 1841 160 0 20 chr2 63830007 63830307 -189426276 - AluY SINE Alu -17 294 1 226 113 19 19 chr2 63830307 63830360 -189426223 - HAL1 LINE L1 -1425 1082 1030 605 182 53 120 chr2 63830417 63830642 -189425941 - HAL1 LINE L1 -2296 211 2 1312 178 148 3 chr2 63831214 63831545 -189425038 - Charlie1a DNA MER1_type -4 1451 1073 2032 139 0 7 chr2 63831546 63831848 -189424735 + AluJb SINE Alu 1 300 -12 830 117 0 0 chr2 63831850 63831961 -189424622 + AluSq/x SINE Alu 1 111 -201 641 147 147 0 chr2 63832815 63832931 -189423652 - Tigger1 DNA MER2_type -1 2417 2285 2300 87 3 3 chr2 63832931 63833231 -189423352 - AluSg SINE Alu -10 300 1 2322 158 57 42 chr2 63833233 63833595 -189422988 - Tigger1 DNA MER2_type -940 1478 1104 1284 261 3 7 chr2 63833595 63833898 -189422685 - AluSx SINE Alu 0 302 1 2322 158 57 42 chr2 63833898 63834079 -189422504 - Tigger1 DNA MER2_type -1314 1104 927 1035 164 208 25 chr2 63834464 63834519 -189422064 - L1MB8 LINE L1 -1 6177 6133 231 36 0 0 chr2 63834519 63834547 -189422036 + (TTTTC)n Simple_repeat Simple_repeat 3 30 0 2002 104 14 7 chr2 63834547 63834826 -189421757 - AluSp SINE Alu -30 283 3 1035 164 208 25 chr2 63834826 63835087 -189421496 - L1MB8 LINE L1 -44 6134 5802 2398 199 66 17 chr2 63835087 63835616 -189420967 - Charlie1a DNA MER1_type -483 972 418 226 185 15 31 chr2 63835619 63835684 -189420899 - Charlie1a DNA MER1_type -1197 258 195 903 27 0 9 chr2 63835691 63835801 -189420782 - AluY SINE Alu -6 305 197 795 165 201 6 chr2 63835801 63835965 -189420618 - Charlie1a DNA MER1_type -1254 201 6 2068 111 0 0 chr2 63835972 63836243 -189420340 - AluSx SINE Alu -15 297 27 641 147 147 0 chr2 63837250 63837366 -189419217 - Tigger1 DNA MER2_type -1 2417 2285 2300 87 3 3 chr2 63837366 63837666 -189418917 - AluSg SINE Alu -10 300 1 9407 123 24 23 chr2 63837668 63838022 -189418561 - Tigger1 DNA MER2_type -940 1478 1126 2474 94 0 0 chr2 63838022 63838331 -189418252 - AluSx SINE Alu -3 309 1 9407 123 24 23 chr2 63838331 63838777 -189417806 - Tigger1 DNA MER2_type -1292 1126 682 2310 86 0 7 chr2 63838777 63839068 -189417515 + AluSg SINE Alu 1 289 -21 9407 123 24 23 chr2 63839068 63839742 -189416841 - Tigger1 DNA MER2_type -1736 682 2 1629 192 38 0 chr2 63839747 63839916 -189416667 - AluJo SINE Alu -9 303 117 307 0 47 0 chr2 63839916 63839959 -189416624 + (TTTTA)n Simple_repeat Simple_repeat 2 46 0 1629 192 38 0 chr2 63839959 63840081 -189416502 - AluJo SINE Alu -195 117 1 869 142 14 14 chr2 63840097 63840245 -189416338 + L1MB8 LINE L1 6029 6176 -2 310 122 61 0 chr2 63840246 63840295 -189416288 + MER3 DNA MER1_type 158 209 0 * 314 176 0 0 chr2 63840252 63840303 -189416280 - MER3 DNA MER1_type -119 90 40 924 172 6 12 chr2 63840554 63840717 -189415866 + FRAM SINE Alu 10 171 -5 212 188 319 0 chr2 63841609 63841678 -189414905 + MIR SINE MIR 63 153 -109 1936 141 17 7 chr2 63841881 63842179 -189414404 - AluJb SINE Alu -11 301 1 2107 109 3 7 chr2 63842677 63842971 -189413612 + AluSx SINE Alu 1 293 -19 2123 107 34 0 chr2 63843888 63844179 -189412404 + AluSx SINE Alu 1 301 -11 243 88 0 0 chr2 63844248 63844282 -189412301 + (T)n Simple_repeat Simple_repeat 1 34 0 804 175 21 88 chr2 63844928 63845104 -189411479 - AluJo SINE Alu -10 302 139 1912 101 0 12 chr2 63845104 63845361 -189411222 - AluSx SINE Alu -2 310 57 804 175 21 88 chr2 63845361 63845378 -189411205 - AluJo SINE Alu -173 139 122 2408 85 0 0 chr2 63845569 63845874 -189410709 - AluSg1 SINE Alu -4 305 1 1139 194 48 0 chr2 63846276 63846482 -189410101 + MER58A DNA MER1_type 6 221 -3 2266 107 3 0 chr2 63846732 63847040 -189409543 - AluY SINE Alu -2 309 1 1584 162 23 36 chr2 63847134 63847436 -189409147 - AluJo SINE Alu -14 298 1 1987 134 10 10 chr2 63847825 63848134 -189408449 - AluSx SINE Alu 0 312 1 2129 129 0 3 chr2 63848139 63848433 -189408150 - AluSx SINE Alu -19 293 1 21 0 0 0 chr2 63849067 63849088 -189407495 + AT_rich Low_complexity Low_complexity 1 21 0 2070 105 40 0 chr2 63849373 63849669 -189406914 + AluSx SINE Alu 1 308 -4 271 292 92 36 chr2 63849673 63849868 -189406715 + L1MC4a LINE L1 5844 6049 -1759 2055 113 10 10 chr2 63849922 63850223 -189406360 - AluSx SINE Alu -11 301 1 1618 157 22 29 chr2 63850314 63850588 -189405995 + AluJb SINE Alu 2 273 -39 3102 42 0 3 chr2 63850588 63850977 -189405606 + L1PA3 LINE L1 5800 6187 0 836 146 0 29 chr2 63851002 63851139 -189405444 - FLAM_C SINE Alu -10 133 1 2369 89 0 13 chr2 63851411 63851715 -189404868 + AluSq SINE Alu 1 300 -13 352 295 21 11 chr2 63851715 63851810 -189404773 + MER5A DNA MER1_type 66 161 -28 222 233 33 17 chr2 63851927 63851987 -189404596 - MIR SINE MIR -121 141 81 2088 138 0 0 chr2 63852410 63852707 -189403876 + AluSx SINE Alu 1 297 -15 2314 91 0 3 chr2 63852872 63853169 -189403414 + AluSp SINE Alu 1 296 -17 1806 158 0 35 chr2 63854216 63854357 -189402226 + AluJb SINE Alu 1 145 -167 2367 96 0 0 chr2 63854357 63854659 -189401924 + AluSq SINE Alu 1 302 -11 1806 158 0 35 chr2 63854659 63854834 -189401749 + AluJb SINE Alu 145 306 -6 1677 199 0 23 chr2 63854878 63855184 -189401399 + AluJo SINE Alu 1 299 -13 22 0 0 0 chr2 63855336 63855358 -189401225 + AT_rich Low_complexity Low_complexity 1 22 0 1036 159 0 18 chr2 63855360 63855530 -189401053 + AluJb SINE Alu 129 295 -17 49 43 0 0 chr2 63857235 63857305 -189399278 + AT_rich Low_complexity Low_complexity 1 70 0 337 254 109 42 chr2 63857495 63857688 -189398895 + L1MC5 LINE L1 7712 7917 -44 500 91 0 0 chr2 63857811 63857888 -189398695 - Alu SINE Alu -3 306 230 1000 101 7 0 chr2 63857903 63858041 -189398542 - AluSq/x SINE Alu -173 139 1 205 136 45 0 chr2 63859110 63859154 -189397429 + T-rich Low_complexity Low_complexity 5 50 0 2152 88 0 0 chr2 63861207 63861527 -189395056 - AluSq SINE Alu 0 320 1 1853 154 10 3 chr2 63861780 63862085 -189394498 - AluSx SINE Alu -5 307 1 2057 97 30 13 chr2 63863043 63863341 -189393242 - AluSx SINE Alu -9 303 1 1928 132 14 3 chr2 63864548 63864843 -189391740 + AluSx SINE Alu 1 298 -14 2113 106 0 10 chr2 63864850 63865152 -189391431 + AluSx SINE Alu 1 299 -13 1634 158 47 7 chr2 63865450 63865748 -189390835 + AluJo SINE Alu 1 310 -2 410 133 0 0 chr2 63865952 63866012 -189390571 + AluS SINE Alu 2 61 -251 1443 184 7 4 chr2 63866013 63866285 -189390298 - MER52A LTR ERV1 -1104 651 379 928 158 123 66 chr2 63866277 63866505 -189390078 - MER52A LTR ERV1 -1514 241 1 * 574 230 142 15 chr2 63866506 63866767 -189389816 + HAL1 LINE L1 2105 2398 -109 1275 126 0 0 chr2 63866799 63866981 -189389602 - AluSg/x SINE Alu -5 305 124 1656 171 14 3 chr2 63867268 63867560 -189389023 + AluJb SINE Alu 1 295 -17 1374 153 4 27 chr2 63867560 63867655 -189388928 + AluJb SINE Alu 2 98 -214 2361 132 100 5 chr2 63867655 63868064 -189388519 + MER83 LTR ERV1 1 448 0 1374 153 4 27 chr2 63868064 63868229 -189388354 + AluJb SINE Alu 98 256 -56 1035 264 108 56 chr2 63868441 63869026 -189387557 + MLT1G LTR MaLR 4 578 -12 2273 87 0 3 chr2 63869130 63869429 -189387154 - AluSq SINE Alu -15 298 1 7362 117 24 19 chr2 63869430 63869875 -189386708 - Tigger1 DNA MER2_type -1291 1127 686 2157 86 3 7 chr2 63869875 63870165 -189386418 + AluSg SINE Alu 1 289 -21 7362 117 24 19 chr2 63870165 63870839 -189385744 - Tigger1 DNA MER2_type -1732 686 2 1534 192 38 0 chr2 63870844 63871013 -189385570 - AluJo SINE Alu -9 303 117 307 0 47 0 chr2 63871013 63871056 -189385527 + (TTTTA)n Simple_repeat Simple_repeat 2 46 0 1534 192 38 0 chr2 63871056 63871178 -189385405 - AluJo SINE Alu -195 117 1 823 142 14 14 chr2 63871194 63871342 -189385241 + L1MB8 LINE L1 6029 6176 -2 309 122 61 0 chr2 63871343 63871392 -189385191 + MER3 DNA MER1_type 158 209 0 * 315 176 0 0 chr2 63871349 63871400 -189385183 - MER3 DNA MER1_type -119 90 40 870 184 6 0 chr2 63871651 63871814 -189384769 + FRAM SINE Alu 10 173 -3 186 189 40 81 chr2 63872702 63872776 -189383807 + MIR SINE MIR 83 153 -109 1841 148 17 0 chr2 63872979 63873277 -189383306 - AluJb SINE Alu -9 303 1 2009 109 3 7 chr2 63873774 63874068 -189382515 + AluSx SINE Alu 1 293 -19 2019 107 34 0 chr2 63874985 63875276 -189381307 + AluSx SINE Alu 1 301 -11 243 88 0 0 chr2 63875345 63875379 -189381204 + (T)n Simple_repeat Simple_repeat 1 34 0 1109 202 32 32 chr2 63876676 63876924 -189379659 - MLT1B LTR MaLR -142 248 1 427 311 78 12 chr2 63877813 63878135 -189378448 - L1ME3A LINE L1 -220 5950 5608 184 233 122 22 chr2 63878339 63878429 -189378154 + MIR SINE MIR 103 201 -61 207 0 0 0 chr2 63878644 63878667 -189377916 + (T)n Simple_repeat Simple_repeat 1 23 0 539 158 8 8 chr2 63878738 63878865 -189377718 - AluSp/q SINE Alu -8 305 179 246 264 121 3 chr2 63879907 63880044 -189376539 + MIR SINE MIR 17 168 -64 383 305 59 44 chr2 63880057 63880260 -189376323 + MIR SINE MIR 13 218 -44 1729 168 10 16 chr2 63880568 63880871 -189375712 + AluJo SINE Alu 1 301 -11 1717 174 7 0 chr2 63880913 63881212 -189375371 + AluJb SINE Alu 1 301 -11 382 323 88 44 chr2 63881988 63882375 -189374208 - L2 LINE L2 -4 3268 2865 190 206 95 48 chr2 63882577 63882640 -189373943 + MER5A DNA MER1_type 49 114 -75 1467 144 79 29 chr2 63882975 63883253 -189373330 - AluJb SINE Alu -20 292 1 2196 100 3 3 chr2 63883850 63884161 -189372422 + AluSx SINE Alu 1 311 -1 187 274 77 83 chr2 63884342 63884510 -189372073 - L2 LINE L2 -1292 2022 1856 534 215 3 83 chr2 63884766 63884898 -189371685 + MLT1F LTR MaLR 1 112 -455 1944 121 7 33 chr2 63884898 63885014 -189371569 + AluSx SINE Alu 1 119 -193 2147 113 7 0 chr2 63885014 63885324 -189371259 + AluSp SINE Alu 1 312 -1 1944 121 7 33 chr2 63885324 63885513 -189371070 + AluSx SINE Alu 119 298 -14 534 215 3 83 chr2 63885513 63885583 -189371000 + MLT1F LTR MaLR 112 186 -381 3193 155 73 144 chr2 63885601 63886017 -189370566 - MER21A LTR ERV1 -19 912 595 1616 134 35 0 chr2 63886017 63886271 -189370312 - AluSq SINE Alu -50 263 1 3193 155 73 144 chr2 63886271 63886762 -189369821 - MER21A LTR ERV1 -336 595 70 335 172 0 0 chr2 63886876 63886934 -189369649 - MER21A LTR ERV1 -861 70 13 972 218 78 11 chr2 63886969 63887261 -189369322 + MLT1F LTR MaLR 170 540 -2 1079 136 131 20 chr2 63887272 63887471 -189369112 + AluJb SINE Alu 1 221 -91 543 272 102 21 chr2 63887475 63887710 -189368873 - L2 LINE L2 -905 2409 2156 500 128 13 0 chr2 63887812 63887890 -189368693 + AluJb SINE Alu 223 301 -11 1197 251 84 32 chr2 63889207 63889708 -189366875 + L2 LINE L2 2175 2701 -613 800 118 7 49 chr2 63889716 63889860 -189366723 - FLAM_C SINE Alu 0 143 6 2040 110 0 0 chr2 63889873 63890181 -189366402 - AluSc SINE Alu 0 308 1 461 275 42 28 chr2 63890184 63890326 -189366257 + L2 LINE L2 2693 2836 -478 2060 107 7 13 chr2 63890345 63890645 -189365938 + AluSx SINE Alu 1 298 -14 881 207 42 73 chr2 63890658 63890919 -189365664 - L1MB8 LINE L1 -6 6172 5920 975 309 63 11 chr2 63891335 63891701 -189364882 + LTR16A LTR ERVL 61 445 -5 1739 165 7 10 chr2 63892376 63892673 -189363910 + AluJo SINE Alu 5 300 -12 563 238 6 94 chr2 63892693 63892874 -189363709 - MIR SINE MIR -28 234 70 414 165 0 0 chr2 63893558 63893637 -189362946 - AluJb SINE Alu 0 312 234 3647 157 43 47 chr2 63893637 63894404 -189362179 - LTR1B LTR ERV1 -1 784 3 1420 175 0 0 chr2 63894404 63894644 -189361939 - AluJb SINE Alu -72 240 1 713 153 163 61 chr2 63894782 63894978 -189361605 - MER106A DNA MER1_type -3 233 18 2059 113 3 0 chr2 63894993 63895277 -189361306 - AluSg SINE Alu -25 285 1 1517 226 90 53 chr2 63895446 63895956 -189360627 + L1ME3 LINE L1 5626 6154 -8 1726 173 14 54 chr2 63896122 63896243 -189360340 - MER4D LTR ERV1 0 903 779 2312 82 0 3 chr2 63896243 63896549 -189360034 + AluSx SINE Alu 1 305 -7 1726 173 14 54 chr2 63896549 63896797 -189359786 - MER4D LTR ERV1 -124 779 549 1478 170 56 0 chr2 63896827 63897097 -189359486 - MER49 LTR ERV1 -638 285 1 598 225 60 0 chr2 63897470 63897621 -189358962 + MIR SINE MIR 63 222 -40 363 172 23 58 chr2 63897621 63897708 -189358875 - MER34 LTR ERV1 -1 541 458 907 161 33 115 chr2 63897730 63897845 -189358738 - MER34B LTR ERV1 -332 233 147 1989 119 0 47 chr2 63897845 63898163 -189358420 + AluSq SINE Alu 1 303 -10 907 161 33 115 chr2 63898163 63898290 -189358293 - MER34B LTR ERV1 -418 147 11 330 297 11 22 chr2 63898392 63898483 -189358100 - L2 LINE L2 -2 3270 3181 190 330 66 19 chr2 63898705 63898811 -189357772 - L2 LINE L2 -3 3269 3159 2168 95 0 13 chr2 63898935 63899302 -189357281 - AluSx SINE Alu 0 363 1 731 238 17 28 chr2 63899948 63900129 -189356454 + MER63A DNA MER1_type 32 210 0 2350 130 19 53 chr2 63900294 63900517 -189356066 + MER57A LTR ERV1 1 205 -198 2177 119 0 0 chr2 63900517 63900828 -189355755 - AluSx SINE Alu -1 311 1 2350 130 19 53 chr2 63900828 63901019 -189355564 + MER57A LTR ERV1 205 401 -2 1776 162 3 3 chr2 63901101 63901398 -189355185 - AluJb SINE Alu -15 297 1 2148 104 0 0 chr2 63901532 63901830 -189354753 - AluSx SINE Alu -13 299 2 214 250 33 17 chr2 63901874 63901934 -189354649 + L2 LINE L2 3137 3197 -75 294 289 33 22 chr2 63902338 63902428 -189354155 - MER91A DNA MER1_type -82 114 24 373 231 50 25 chr2 63902453 63902613 -189353970 - L2 LINE L2 -314 2999 2836 1737 143 13 19 chr2 63903030 63903344 -189353239 - AluJo SINE Alu 0 312 1 287 328 91 37 chr2 63903511 63903977 -189352606 - L2 LINE L2 -25 3247 2753 515 239 86 95 chr2 63904047 63904374 -189352209 - MLT1J LTR MaLR -151 360 37 586 317 102 0 chr2 63904374 63904620 -189351963 - L2 LINE L2 -977 2337 2067 1495 153 4 20 chr2 63905448 63905702 -189350881 - 7SLRNA srpRNA srpRNA -4 316 67 223 152 63 0 chr2 63906076 63906155 -189350428 + (TA)n Simple_repeat Simple_repeat 2 85 0 511 161 0 0 chr2 63907152 63907239 -189349344 + AluJ/FRAM SINE Alu 214 300 -12 628 160 14 0 chr2 63907272 63907389 -189349194 + MIR SINE MIR 49 167 -58 296 323 103 53 chr2 63907487 63907828 -189348755 + L2 LINE L2 2915 3272 0 2090 97 3 21 chr2 63908879 63909266 -189347317 + AluSx SINE Alu 1 382 0 189 277 39 100 chr2 63909336 63909466 -189347117 + MIR SINE MIR 33 154 -108 804 160 8 0 chr2 63910196 63910327 -189346256 - MER20 DNA MER1_type -4 215 84 362 297 91 24 chr2 63910591 63910756 -189345827 - MER69A DNA AcHobo 0 177 2 183 234 16 47 chr2 63911486 63911550 -189345033 - MIR SINE MIR 0 262 201 1093 209 46 112 chr2 63911767 63911952 -189344631 + MER39 LTR ERV1 8 204 -503 2373 108 0 0 chr2 63911952 63912259 -189344324 - AluSx SINE Alu 0 312 6 1093 209 46 112 chr2 63912259 63912597 -189343986 + MER39 LTR ERV1 204 695 -12 2391 97 0 0 chr2 63912754 63913052 -189343531 + AluSx SINE Alu 2 299 -13 248 242 16 0 chr2 63913394 63913456 -189343127 - MER5A DNA MER1_type -75 114 52 561 230 24 0 chr2 63913476 63913602 -189342981 - MER5A DNA MER1_type 0 189 61 2176 131 0 0 chr2 63913603 63913909 -189342674 + AluSx SINE Alu 1 306 -6 617 196 9 0 chr2 63913974 63914081 -189342502 - FLAM_C SINE Alu -34 109 2 2570 50 10 0 chr2 63914091 63914391 -189342192 - AluY SINE Alu -8 303 1 187 200 0 0 chr2 63914392 63914427 -189342156 - MER5A DNA MER1_type -114 75 41 377 204 165 0 chr2 63914996 63915099 -189341484 - MER5B DNA MER1_type -58 120 1 956 132 31 0 chr2 63915243 63915402 -189341181 - MER5A DNA MER1_type 0 189 26 2203 98 40 0 chr2 63915530 63915826 -189340757 + AluSx SINE Alu 1 308 -4 251 151 279 12 chr2 63916934 63917020 -189339563 - MER5B DNA MER1_type 0 178 70 916 203 0 21 chr2 63917040 63917227 -189339356 - FRAM SINE Alu 0 176 1 292 173 27 40 chr2 63917229 63917304 -189339279 - L1ME3A LINE L1 -8 6162 6089 * 1147 255 57 5 chr2 63917299 63917600 -189338983 - L1ME LINE L1 -315 5840 5509 194 254 36 0 chr2 63917641 63917696 -189338887 + MER5B DNA MER1_type 120 176 -2 295 258 77 47 chr2 63917784 63917932 -189338651 - MIR SINE MIR -61 147 34 408 293 138 11 chr2 63918253 63918441 -189338142 + MIR SINE MIR 40 251 -11 1731 154 3 45 chr2 63918444 63918755 -189337828 - AluJo SINE Alu -14 298 1 2939 225 91 79 chr2 63918803 63918886 -189337697 + L2 LINE L2 1603 1683 -1630 2157 138 0 0 chr2 63918886 63919183 -189337400 - AluJb SINE Alu -15 297 1 2939 225 91 79 chr2 63919183 63919298 -189337285 + L2 LINE L2 1683 1795 -1518 371 0 0 63 chr2 63919298 63919361 -189337222 + (TTTG)n Simple_repeat Simple_repeat 2 60 0 1750 107 8 0 chr2 63919364 63919607 -189336976 - AluSp SINE Alu -30 283 39 2939 225 91 79 chr2 63919607 63919981 -189336602 + L2 LINE L2 1796 2164 -1149 2014 132 7 0 chr2 63919981 63920285 -189336298 - AluSx SINE Alu 0 306 1 2939 225 91 79 chr2 63920285 63920564 -189336019 + L2 LINE L2 2164 2438 -875 383 100 15 0 chr2 63920564 63920627 -189335956 - AluSg/x SINE Alu -84 216 166 2939 225 91 79 chr2 63920627 63921093 -189335490 + L2 LINE L2 2438 3006 -307 958 147 39 0 chr2 63921095 63921251 -189335332 - AluSg/x SINE Alu -5 307 146 1660 70 0 0 chr2 63921251 63921451 -189335132 - AluSq SINE Alu -113 200 1 185 188 83 0 chr2 63921451 63921499 -189335084 + L2 LINE L2 3010 3061 -252 379 293 6 25 chr2 63921572 63921729 -189334854 + L2 LINE L2 3160 3313 0 272 200 0 0 chr2 63921965 63922015 -189334568 + PABL_B LTR ERV1 1 50 -617 738 185 13 19 chr2 63922493 63922650 -189333933 + PABL_B LTR ERV1 512 667 0 2140 113 0 46 chr2 63922929 63923256 -189333327 + AluSx SINE Alu 1 312 0 2016 206 142 31 chr2 63923677 63924254 -189332329 - MER115 DNA AcHobo -41 652 12 2291 112 3 0 chr2 63924515 63924819 -189331764 - AluSx SINE Alu -7 305 1 203 175 0 0 chr2 63925685 63925725 -189330858 + A-rich Low_complexity Low_complexity 1 40 0 243 88 0 0 chr2 63925744 63925778 -189330805 + (TG)n Simple_repeat Simple_repeat 2 35 0 21 36 0 0 chr2 63925778 63925806 -189330777 + AT_rich Low_complexity Low_complexity 1 28 0 811 156 7 22 chr2 63925876 63926011 -189330572 - FLAM_C SINE Alu 0 133 1 183 156 0 0 chr2 63926610 63926642 -189329941 + A-rich Low_complexity Low_complexity 1 32 0 186 43 0 0 chr2 63926649 63926672 -189329911 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 243 276 77 82 chr2 63927267 63927437 -189329146 - MER91A DNA MER1_type 0 196 28 251 265 171 34 chr2 63927467 63927795 -189328788 + L2 LINE L2 1816 2188 -1126 712 237 83 0 chr2 63928652 63928808 -189327775 - MER5A DNA MER1_type -4 185 17 1619 177 6 37 chr2 63929205 63929527 -189327056 + AluJo SINE Alu 1 312 0 2319 115 0 6 chr2 63929530 63929844 -189326739 + AluSx SINE Alu 1 312 0 480 229 38 0 chr2 63931223 63931328 -189325255 - L2 LINE L2 -13 3300 3192 1922 130 0 18 chr2 63931434 63931711 -189324872 + AluSx SINE Alu 1 272 -40 373 216 121 35 chr2 63931771 63931887 -189324696 - MER63 DNA MER1_type -83 753 2 2526 67 0 0 chr2 63932006 63932305 -189324278 - AluY SINE Alu -12 299 1 446 231 0 100 chr2 63932729 63932859 -189323724 + LTR67 LTR ERVL 96 212 -345 498 260 0 8 chr2 63932957 63933084 -189323499 + LTR67 LTR ERVL 432 557 0 845 213 60 13 chr2 63933370 63933605 -189322978 - HsTC2 DNA Tc2 -56 1842 1597 2345 108 0 0 chr2 63933613 63933919 -189322664 - AluSq SINE Alu -7 306 1 236 216 204 0 chr2 63934047 63934135 -189322448 - L1MD3 LINE L1 0 7995 7890 665 125 36 0 chr2 63934153 63934265 -189322318 - L1MB7 LINE L1 -19 6165 6050 489 134 9 62 chr2 63934304 63934416 -189322167 - L1MB7 LINE L1 -121 6063 5958 552 239 69 31 chr2 63934417 63934576 -189322007 - HsTC2 DNA Tc2 -276 1622 1282 381 198 188 0 chr2 63934575 63934671 -189321912 - HsTC2 DNA Tc2 -1755 143 30 * 838 155 0 0 chr2 63934673 63934802 -189321781 + FLAM_A SINE Alu 1 129 -4 996 203 111 88 chr2 63935311 63935778 -189320805 + LTR33 LTR ERVL 34 511 -10 188 67 33 0 chr2 63935818 63935848 -189320735 + (TCTCC)n Simple_repeat Simple_repeat 2 32 0 1744 170 106 23 chr2 63935951 63936346 -189320237 - MSTA LTR MaLR 0 428 1 523 260 101 114 chr2 63936546 63937297 -189319286 + L2 LINE L2 2230 2970 -344 370 309 8 0 chr2 63937422 63937548 -189319035 + L2 LINE L2 3187 3313 0 240 275 198 0 chr2 63937562 63937653 -189318930 + MIR3 SINE MIR 99 207 -1 234 0 0 0 chr2 63937714 63937740 -189318843 + (T)n Simple_repeat Simple_repeat 1 26 0 1246 213 88 60 chr2 63938164 63938191 -189318392 + MLT1C LTR MaLR 97 122 -345 2374 97 0 3 chr2 63938191 63938500 -189318083 + AluSx SINE Alu 1 308 -4 1246 213 88 60 chr2 63938500 63938825 -189317758 + MLT1C LTR MaLR 122 459 -8 1573 164 38 32 chr2 63938863 63939186 -189317397 + MER58D DNA MER1_type 1 328 -2092 2743 94 5 0 chr2 63939186 63939559 -189317024 + THE1C LTR MaLR 1 375 0 1573 164 38 32 chr2 63939559 63939577 -189317006 + MER58D DNA MER1_type 328 344 -42 1199 153 19 56 chr2 63939577 63939793 -189316790 - AluJo SINE Alu -19 293 86 245 191 0 0 chr2 63939794 63939841 -189316742 + MER58D DNA MER1_type 339 385 -1 1146 143 94 61 chr2 63939972 63940271 -189316312 - L1MB8 LINE L1 0 6178 5862 1030 216 32 35 chr2 63940873 63941364 -189315219 - MLT1G LTR MaLR 0 567 10 795 209 6 18 chr2 63941367 63941530 -189315053 + AluJb SINE Alu 131 291 -21 24 32 0 0 chr2 63941530 63941561 -189315022 + AT_rich Low_complexity Low_complexity 1 31 0 740 243 114 47 chr2 63942102 63942277 -189314306 - MLT1L LTR MaLR -14 601 402 2065 135 7 0 chr2 63942277 63942573 -189314010 - AluSx SINE Alu -14 298 1 740 243 114 47 chr2 63942573 63942652 -189313931 - MLT1L LTR MaLR -213 402 330 1505 160 117 52 chr2 63942705 63943048 -189313535 - MLT1A1 LTR MaLR 0 365 1 2084 107 0 4 chr2 63943073 63943344 -189313239 + AluSx SINE Alu 27 296 -16 2270 104 0 3 chr2 63943445 63943743 -189312840 - AluSx SINE Alu -15 297 1 2171 112 0 26 chr2 63943817 63944130 -189312453 + AluSc SINE Alu 1 305 -4 2083 127 0 0 chr2 63944575 63944867 -189311716 - AluSx SINE Alu -20 292 1 1463 236 116 21 chr2 63944885 63945369 -189311214 + L1ME3A LINE L1 5541 6070 -100 635 172 34 133 chr2 63945372 63945605 -189310978 + MER67A LTR ERV1 3 212 -331 1828 209 103 54 chr2 63945917 63946149 -189310434 - MER20B DNA MER1_type -4 779 560 1923 144 3 10 chr2 63946149 63946448 -189310135 + AluJo SINE Alu 1 297 -15 1828 209 103 54 chr2 63946448 63946535 -189310048 - MER20B DNA MER1_type -223 560 479 2167 129 0 0 chr2 63946535 63946837 -189309746 - AluSx SINE Alu -9 303 2 1828 209 103 54 chr2 63946837 63947109 -189309474 - MER20B DNA MER1_type -304 479 158 346 285 8 32 chr2 63947113 63947188 -189309395 + L2 LINE L2 2921 2993 -320 2422 79 3 3 chr2 63947188 63947492 -189309091 - AluSg1 SINE Alu -5 304 1 346 285 8 32 chr2 63947492 63947539 -189309044 + L2 LINE L2 2993 3040 -273 813 192 76 45 chr2 63947539 63947763 -189308820 + MER67C LTR ERV1 66 296 -414 610 200 45 91 chr2 63947817 63948037 -189308546 + MER67C LTR ERV1 498 707 -3 264 298 46 30 chr2 63948127 63948258 -189308325 + MIR SINE MIR 20 152 -110 216 198 23 35 chr2 63948989 63949075 -189307508 + G-rich Low_complexity Low_complexity 1 85 0 2449 53 0 17 chr2 63950002 63950303 -189306280 + AluSx SINE Alu 1 296 -16 21 71 0 0 chr2 63952168 63952210 -189304373 + AT_rich Low_complexity Low_complexity 1 42 0 287 165 220 11 chr2 63952833 63952924 -189303659 + MER53 DNA DNA 68 177 -12 236 132 19 0 chr2 63952881 63952934 -189303649 - MER53 DNA DNA -124 65 12 * 21 0 0 0 chr2 63952996 63953017 -189303566 + AT_rich Low_complexity Low_complexity 1 21 0 191 234 31 47 chr2 63953829 63953893 -189302690 - MER5B DNA MER1_type -98 80 18 255 232 18 89 chr2 63954119 63954231 -189302352 + MIR SINE MIR 118 221 -41 189 234 64 0 chr2 63955038 63955085 -189301498 - L2 LINE L2 -2 3311 3262 23 54 0 0 chr2 63955402 63955439 -189301144 + AT_rich Low_complexity Low_complexity 1 37 0 2266 122 0 3 chr2 63955527 63955838 -189300745 - AluSx SINE Alu -2 310 1 197 370 140 7 chr2 63956394 63956686 -189299897 + L2 LINE L2 2448 2778 -536 6283 37 22 4 chr2 63957071 63957832 -189298751 - L1PA4 LINE L1 0 6155 5381 472 286 54 29 chr2 63957835 63958076 -189298507 - MIR SINE MIR -9 253 7 1060 190 145 32 chr2 63958281 63958591 -189297992 - L1ME1 LINE L1 -5 6161 5817 2246 87 0 3 chr2 63960033 63960339 -189296244 - AluSq SINE Alu 0 305 1 2326 107 3 0 chr2 63960352 63960662 -189295921 - AluY SINE Alu 0 311 1 2484 81 0 7 chr2 63962461 63962768 -189293815 - AluSp SINE Alu -8 305 1 1749 158 11 4 chr2 63962807 63963086 -189293497 - AluJb SINE Alu -26 286 6 944 279 82 22 chr2 63963230 63963602 -189292981 + L1ME4a LINE L1 5494 5919 -202 2066 123 6 19 chr2 63963602 63963918 -189292665 - AluSx SINE Alu 0 312 1 944 279 82 22 chr2 63963918 63964118 -189292465 + L1ME4a LINE L1 5919 6105 -16 392 273 47 0 chr2 63964273 63964401 -189292182 + L2 LINE L2 1944 2077 -1237 1165 212 48 39 chr2 63964652 63964906 -189291677 - L1MC4 LINE L1 -913 7129 6870 2168 142 0 0 chr2 63964906 63965217 -189291366 - AluSx SINE Alu -1 311 1 1165 212 48 39 chr2 63965217 63965297 -189291286 - L1MC4 LINE L1 -1172 6870 6792 692 296 123 82 chr2 63965297 63965355 -189291228 + L2 LINE L2 2281 2335 -979 802 163 0 15 chr2 63965355 63965490 -189291093 + FLAM_A SINE Alu 1 133 0 692 296 123 82 chr2 63965490 63966100 -189290483 + L2 LINE L2 2335 2976 -338 1024 218 40 0 chr2 63966220 63966422 -189290161 - MER58A DNA MER1_type -10 214 5 316 237 175 70 chr2 63966425 63966539 -189290044 + L2 LINE L2 3147 3272 0 1707 178 14 0 chr2 63966813 63967100 -189289483 + AluJb SINE Alu 1 291 -21 639 238 89 83 chr2 63967599 63967901 -189288682 - MER102b DNA MER1_type 0 341 38 2316 98 7 0 chr2 63968134 63968431 -189288152 - AluSp SINE Alu -14 299 1 2435 82 3 19 chr2 63968754 63969071 -189287512 - AluSq SINE Alu -1 312 1 563 239 119 62 chr2 63969959 63970205 -189286378 - L1MC4a LINE L1 -105 6016 5735 1752 154 27 3 chr2 63970205 63970498 -189286085 - AluJo SINE Alu -12 300 1 563 239 119 62 chr2 63970498 63970670 -189285913 - L1MC4a LINE L1 -386 5735 5574 313 342 168 30 chr2 63970732 63970934 -189285649 - MIR SINE MIR 0 262 33 1705 151 4 19 chr2 63971022 63971150 -189285433 - AluJb SINE Alu -51 261 133 1963 155 10 0 chr2 63971150 63971440 -189285143 - AluSx SINE Alu -19 293 1 1705 151 4 19 chr2 63971440 63971576 -189285007 - AluJb SINE Alu -179 133 1 458 248 9 0 chr2 63971636 63971745 -189284838 - MIR SINE MIR -49 213 104 2206 87 0 11 chr2 63971745 63972031 -189284552 + AluSg SINE Alu 16 298 -12 1389 73 0 11 chr2 63972031 63972208 -189284375 + AluSp SINE Alu 134 308 -5 1677 185 17 23 chr2 63972215 63972517 -189284066 + AluJb SINE Alu 1 300 -12 422 291 10 19 chr2 63972517 63972620 -189283963 - MIR SINE MIR -159 103 2 2415 70 3 0 chr2 63972704 63973002 -189283581 - AluY SINE Alu -12 299 1 406 248 96 8 chr2 63973036 63973161 -189283422 - MER5A DNA MER1_type 0 189 54 979 114 149 0 chr2 63973222 63973397 -189283186 - MER50 LTR ERV1 -37 697 497 232 266 83 79 chr2 63973444 63973532 -189283051 + MER112 DNA MER1_type 19 105 -155 2494 88 11 8 chr2 63973532 63973885 -189282698 - THE1A LTR MaLR 0 355 2 232 266 83 79 chr2 63973885 63974025 -189282558 + MER112 DNA MER1_type 105 248 -12 185 319 0 0 chr2 63974031 63974078 -189282505 - MER5A DNA MER1_type -136 53 7 340 289 68 98 chr2 63974174 63974409 -189282174 + L2 LINE L2 2831 3058 -214 468 123 0 0 chr2 63974430 63974503 -189282080 + (TG)n Simple_repeat Simple_repeat 2 74 0 2330 94 10 10 chr2 63974522 63974829 -189281754 - AluSq SINE Alu -6 307 1 526 230 77 20 chr2 63974974 63975170 -189281413 + AluJb SINE Alu 1 207 -105 376 277 23 9 chr2 63975201 63975425 -189281158 + CT-rich Low_complexity Low_complexity 1 227 0 2224 88 3 10 chr2 63975586 63975891 -189280692 - AluY SINE Alu -8 303 1 1655 161 56 7 chr2 63976096 63976382 -189280201 + AluJo SINE Alu 1 300 -12 872 136 0 8 chr2 63976749 63976881 -189279702 - AluJb SINE Alu -181 131 1 777 144 0 43 chr2 63976984 63977123 -189279460 + FLAM_C SINE Alu 3 135 -8 305 224 59 35 chr2 63977372 63977457 -189279126 - L2 LINE L2 -17 3255 3169 687 267 14 1 chr2 63977656 63977835 -189278748 + MIR3 SINE MIR 5 191 -17 2239 98 3 3 chr2 63978101 63978397 -189278186 - AluSx SINE Alu -16 296 1 961 110 0 22 chr2 63978401 63978537 -189278046 - FLAM_C SINE Alu 0 133 1 1525 147 92 29 chr2 63978825 63979098 -189277485 - AluJo SINE Alu -22 290 1 312 208 40 162 chr2 63979593 63979766 -189276817 + L1MC4 LINE L1 7829 7980 -62 1460 141 134 43 chr2 63979812 63980089 -189276494 - AluJo SINE Alu -10 302 1 834 206 70 26 chr2 63980125 63980353 -189276230 - MIR SINE MIR -8 254 17 417 258 155 0 chr2 63980412 63980606 -189275977 + L1M4 LINE L1 5026 5249 -897 624 300 26 9 chr2 63980771 63981001 -189275582 + LTR16B LTR ERVL 219 452 -12 278 197 0 0 chr2 63981012 63981073 -189275510 + L1M4 LINE L1 5254 5314 -848 1381 119 20 29 chr2 63981073 63981317 -189275266 - AluSg SINE Alu -15 295 54 1961 153 0 0 chr2 63981338 63981660 -189274923 - AluSx SINE Alu 0 322 1 2276 105 0 13 chr2 63982334 63982647 -189273936 - AluSg1 SINE Alu 0 309 1 33 43 0 0 chr2 63982677 63982724 -189273859 + AT_rich Low_complexity Low_complexity 1 47 0 1860 139 3 54 chr2 63983042 63983359 -189273224 + AluJo SINE Alu 1 301 -11 715 235 107 24 chr2 63983975 63984356 -189272227 + L1MC5 LINE L1 7154 7495 -547 2281 105 10 0 chr2 63984381 63984686 -189271897 - AluSx SINE Alu -2 310 3 338 309 130 6 chr2 63984696 63984858 -189271725 + L1MC4 LINE L1 7526 7707 -335 1242 180 176 4 chr2 63984902 63985157 -189271426 + AluJo SINE Alu 1 299 -13 1627 157 26 7 chr2 63985169 63985475 -189271108 + L1M4 LINE L1 5318 5629 -549 275 296 0 25 chr2 63985627 63985708 -189270875 + G-rich Low_complexity Low_complexity 3 81 0 2059 94 17 10 chr2 63985948 63986246 -189270337 - AluY SINE Alu -11 300 1 229 255 141 34 chr2 63987381 63987530 -189269053 + L2 LINE L2 3149 3313 0 24 32 0 0 chr2 63987654 63987685 -189268898 + AT_rich Low_complexity Low_complexity 1 31 0 972 136 0 0 chr2 63987706 63987846 -189268737 - FLAM_C SINE Alu -3 140 1 2213 92 3 10 chr2 63987875 63988169 -189268414 + AluSc SINE Alu 1 292 -17 2484 80 0 0 chr2 63988438 63988749 -189267834 + AluY SINE Alu 1 311 0 1988 145 7 0 chr2 63988906 63989203 -189267380 + AluSx SINE Alu 1 299 -13 403 283 63 93 chr2 63989246 63989557 -189267026 + L1 LINE L1 3984 4303 -1843 843 133 21 14 chr2 63989557 63989700 -189266883 + U4 snRNA snRNA 1 144 -1 403 283 63 93 chr2 63989700 63989973 -189266610 + L1 LINE L1 4303 4553 -1593 2394 70 10 0 chr2 63989973 63990274 -189266309 + AluSc SINE Alu 1 304 -5 403 283 63 93 chr2 63990274 63990323 -189266260 + L1 LINE L1 4553 4602 -1544 1729 122 22 44 chr2 63990466 63990785 -189265798 + MER6 DNA MER2_type 294 865 0 22 56 0 0 chr2 63990980 63991016 -189265567 + AT_rich Low_complexity Low_complexity 1 36 0 308 246 41 25 chr2 63991019 63991250 -189265333 + L1 LINE L1 4807 5045 -1101 21 71 0 0 chr2 63991322 63991364 -189265219 + AT_rich Low_complexity Low_complexity 1 42 0 256 292 31 16 chr2 63991422 63991614 -189264969 - L1MCc LINE L1 -4950 1473 1279 23 33 0 0 chr2 63992773 63992803 -189263780 + AT_rich Low_complexity Low_complexity 1 30 0 1093 214 36 26 chr2 63992843 63993082 -189263501 - L1ME1 LINE L1 -99 6067 5823 2506 69 7 0 chr2 63993082 63993385 -189263198 - AluY SINE Alu -6 305 1 1093 214 36 26 chr2 63993385 63993454 -189263129 - L1ME1 LINE L1 -343 5823 5756 21 36 0 0 chr2 63994100 63994128 -189262455 + AT_rich Low_complexity Low_complexity 1 28 0 314 252 73 126 chr2 63994285 63994385 -189262198 + MIR SINE MIR 18 109 -153 1925 148 0 7 chr2 63994385 63994676 -189261907 + AluJb SINE Alu 1 289 -23 314 252 73 126 chr2 63994676 63994726 -189261857 + MIR SINE MIR 109 160 -102 590 274 88 81 chr2 63995338 63995769 -189260814 - L1ME4a LINE L1 0 6121 5688 610 86 0 21 chr2 63995771 63995864 -189260719 - AluJ/FRAM SINE Alu -1 311 221 417 39 0 0 chr2 63995935 63995986 -189260597 + (TG)n Simple_repeat Simple_repeat 2 52 0 1575 118 9 9 chr2 63997038 63997267 -189259316 - AluSg/x SINE Alu -3 309 81 1636 164 0 53 chr2 63997499 63997667 -189258916 - AluJb SINE Alu -22 290 141 2295 109 3 6 chr2 63997667 63997979 -189258604 - AluSx SINE Alu -1 311 1 1636 164 0 53 chr2 63997979 63998091 -189258492 - AluJb SINE Alu -171 141 25 2200 127 3 0 chr2 63998447 63998755 -189257828 - AluSx SINE Alu -3 309 1 705 245 0 64 chr2 63999170 63999374 -189257209 + MER58A DNA MER1_type 33 223 -1 2288 122 0 0 chr2 64001016 64001320 -189255263 + AluSx SINE Alu 1 304 -8 2541 259 81 4 chr2 64001709 64002643 -189253940 + L2 LINE L2 2289 3304 -9 38 22 0 0 chr2 64003787 64003832 -189252751 + AT_rich Low_complexity Low_complexity 1 45 0 224 397 6 6 chr2 64004561 64004717 -189251866 + L2 LINE L2 1804 1959 -1355 274 222 56 14 chr2 64005382 64005454 -189251129 + L2 LINE L2 3221 3295 -18 261 311 100 0 chr2 64005872 64005962 -189250621 - L2 LINE L2 -16 3256 3158 527 188 73 65 chr2 64005966 64006132 -189250451 - L1ME3 LINE L1 -8 6162 5995 839 134 8 15 chr2 64006291 64006425 -189250158 + AluJ SINE Alu 1 133 -169 7627 21 7 0 chr2 64006425 64008099 -189248484 + L1PA3 LINE L1 4488 6167 0 1013 139 53 0 chr2 64008108 64008259 -189248324 + AluJ SINE Alu 136 294 -18 520 201 59 7 chr2 64010088 64010255 -189246328 - MLT1B LTR MaLR -46 344 159 2029 139 17 0 chr2 64010255 64010543 -189246040 - AluJb SINE Alu -19 293 1 5129 181 59 38 chr2 64010566 64012989 -189243594 - L1MA8 LINE L1 0 6291 3919 1491 184 61 24 chr2 64012989 64013283 -189243300 + AluJb SINE Alu 1 305 -7 5129 181 59 38 chr2 64013283 64013515 -189243068 - L1MA8 LINE L1 -2372 3919 3570 1808 174 3 3 chr2 64013515 64013813 -189242770 - AluJb SINE Alu -14 298 1 5129 181 59 38 chr2 64013813 64013878 -189242705 - L1MA8 LINE L1 -2721 3570 3508 2229 92 0 0 chr2 64013885 64014169 -189242414 - AluSc SINE Alu -9 300 17 252 0 0 0 chr2 64016409 64016437 -189240146 + (TG)n Simple_repeat Simple_repeat 1 28 0 4175 202 146 13 chr2 64016942 64018183 -189238400 + L1MC4 LINE L1 6495 7900 -142 319 324 52 24 chr2 64019648 64019853 -189236730 + MIR3 SINE MIR 11 223 -39 1922 126 0 90 chr2 64020977 64021311 -189235272 + AluSx SINE Alu 1 304 -8 370 323 88 65 chr2 64021849 64022320 -189234263 + L2 LINE L2 2486 2989 -283 2359 92 7 0 chr2 64022320 64022625 -189233958 - AluSx SINE Alu -5 307 1 370 323 88 65 chr2 64022625 64022768 -189233815 + L2 LINE L2 2989 3127 -145 270 304 0 0 chr2 64023020 64023089 -189233494 - Charlie8 DNA MER1_type 0 2417 2349 240 274 137 10 chr2 64024553 64024655 -189231928 - MIR SINE MIR 0 262 148 2193 126 0 0 chr2 64024705 64025015 -189231568 + AluSx SINE Alu 1 310 -2 237 236 83 14 chr2 64025204 64025276 -189231307 - MIR3 SINE MIR -45 163 87 2150 109 0 3 chr2 64025324 64025617 -189230966 + AluSc SINE Alu 3 294 -15 3366 136 67 25 chr2 64025778 64026390 -189230193 - MER52A LTR ERV1 0 1755 1118 1306 85 0 0 chr2 64026390 64026555 -189230028 + AluSc SINE Alu 138 302 -7 3645 151 131 22 chr2 64026555 64027464 -189229119 - MER52A LTR ERV1 -158 1120 252 1753 169 34 3 chr2 64027978 64028303 -189228280 + LTR18A LTR ERVL 23 357 0 1760 152 17 10 chr2 64028746 64029036 -189227547 + AluJb SINE Alu 1 292 -20 1860 162 7 0 chr2 64029532 64029828 -189226755 - AluSx SINE Alu -13 299 2 1605 132 128 22 chr2 64030037 64030310 -189226273 + AluJb SINE Alu 1 302 -10 925 218 11 16 chr2 64030322 64030510 -189226073 + AluJb SINE Alu 122 308 -4 21 0 0 0 chr2 64030982 64031003 -189225580 + AT_rich Low_complexity Low_complexity 1 21 0 274 29 0 0 chr2 64031926 64031960 -189224623 + MADE1 DNA Mariner 47 80 0 21 0 0 0 chr2 64032139 64032160 -189224423 + AT_rich Low_complexity Low_complexity 1 21 0 263 298 141 16 chr2 64032307 64032428 -189224155 + MIR3 SINE MIR 25 160 -48 2352 82 0 7 chr2 64032430 64032734 -189223849 + AluSq SINE Alu 1 302 -11 360 292 62 0 chr2 64032771 64032867 -189223716 - L2 LINE L2 -4 3268 3167 190 278 26 122 chr2 64033869 64033984 -189222599 - L3 LINE CR1 0 1577 1474 21 82 0 0 chr2 64036095 64036144 -189220439 + AT_rich Low_complexity Low_complexity 1 49 0 562 221 0 9 chr2 64037836 64037949 -189218634 - L2 LINE L2 -15 3298 3187 1961 112 27 17 chr2 64039945 64040240 -189216343 + AluSq SINE Alu 1 298 -15 776 225 43 43 chr2 64040660 64040918 -189215665 + MER46C DNA MER2_type 80 337 -1 27 0 0 26 chr2 64041019 64041038 -189215545 + AT_rich Low_complexity Low_complexity 1 19 -18 2280 119 0 0 chr2 64041038 64041350 -189215233 + AluSx SINE Alu 1 312 0 27 0 0 26 chr2 64041350 64041368 -189215215 + AT_rich Low_complexity Low_complexity 19 37 0 288 0 0 0 chr2 64042589 64042621 -189213962 + (TG)n Simple_repeat Simple_repeat 1 32 0 283 167 0 0 chr2 64042647 64042695 -189213888 + MER5B DNA MER1_type 131 178 0 1325 123 5 14 chr2 64042756 64042967 -189213616 + AluJb SINE Alu 87 295 -17 214 254 16 16 chr2 64045643 64045706 -189210877 + (TA)n Simple_repeat Simple_repeat 1 63 0 2566 61 0 0 chr2 64046375 64046686 -189209897 + AluY SINE Alu 1 311 0 922 146 7 13 chr2 64047199 64047350 -189209233 - AluSx SINE Alu -158 154 5 720 189 0 8 chr2 64048612 64048744 -189207839 - AluJb SINE Alu -45 267 137 359 194 28 0 chr2 64048969 64049041 -189207542 - MIR3 SINE MIR -5 203 130 2101 132 0 3 chr2 64049242 64049546 -189207037 - AluSx SINE Alu -9 303 1 3258 151 17 10 chr2 64050071 64050594 -189205989 - MER1A DNA MER1_type 0 527 1 411 259 73 18 chr2 64050638 64050858 -189205725 - L1ME4a LINE L1 -237 5884 5653 2323 106 0 3 chr2 64050881 64051192 -189205391 + AluSg SINE Alu 1 310 0 851 213 160 4 chr2 64051411 64051636 -189204947 - MIR SINE MIR -1 261 2 331 247 32 11 chr2 64051642 64051735 -189204848 - MIR SINE MIR -147 115 21 2481 169 77 10 chr2 64052032 64052718 -189203865 - L1MB8 LINE L1 -36 6142 5225 536 245 145 79 chr2 64054073 64054149 -189202434 - MIR SINE MIR 0 262 192 207 0 0 0 chr2 64054149 64054172 -189202411 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1727 197 4 0 chr2 64054175 64054454 -189202129 - AluJo SINE Alu -30 282 3 536 245 145 79 chr2 64054454 64054614 -189201969 - MIR SINE MIR -71 191 6 21 0 0 0 chr2 64054914 64054935 -189201648 + AT_rich Low_complexity Low_complexity 1 21 0 2486 80 3 3 chr2 64055521 64055832 -189200751 + AluY SINE Alu 1 311 0 1091 202 18 9 chr2 64056115 64056343 -189200240 + HERVL18 LTR ERVL 5052 5281 -766 369 174 0 0 chr2 64056577 64056646 -189199937 + (CATATA)n Simple_repeat Simple_repeat 6 74 0 1982 153 80 44 chr2 64058331 64058369 -189198214 - Charlie1b DNA MER1_type -2238 523 488 2195 105 3 7 chr2 64058369 64058665 -189197918 - AluSx SINE Alu -17 295 1 1982 153 80 44 chr2 64058665 64058765 -189197818 - Charlie1b DNA MER1_type -2273 488 393 2233 104 3 0 chr2 64058765 64059054 -189197529 - AluSx SINE Alu -22 290 1 1982 153 80 44 chr2 64059054 64059412 -189197171 - Charlie1b DNA MER1_type -2368 393 8 31 0 0 0 chr2 64059546 64059577 -189197006 + AT_rich Low_complexity Low_complexity 1 31 0 2100 133 0 0 chr2 64059712 64060035 -189196548 - AluSx SINE Alu 0 323 1 805 113 9 0 chr2 64060307 64060422 -189196161 - AluJ SINE Alu -17 295 180 1080 169 17 11 chr2 64060487 64060665 -189195918 - AluJ SINE Alu -133 179 1 26 50 0 0 chr2 64060779 64060819 -189195764 + AT_rich Low_complexity Low_complexity 1 40 0 2214 85 17 10 chr2 64060869 64061163 -189195420 + AluSq SINE Alu 1 296 -17 487 270 108 22 chr2 64061768 64062160 -189194423 + L1ME LINE L1 5351 5777 -384 25 31 0 0 chr2 64062492 64062524 -189194059 + AT_rich Low_complexity Low_complexity 1 32 0 1920 174 3 7 chr2 64062970 64063274 -189193309 - AluSx SINE Alu -9 303 1 216 0 0 0 chr2 64063411 64063435 -189193148 + (A)n Simple_repeat Simple_repeat 1 24 0 312 329 82 12 chr2 64064263 64064433 -189192150 + MIR SINE MIR 21 202 -60 203 275 22 0 chr2 64064852 64064943 -189191640 + GA-rich Low_complexity Low_complexity 3 95 0 1545 145 71 35 chr2 64065129 64065412 -189191171 + AluSx SINE Alu 7 299 -13 1093 115 0 0 chr2 64065412 64065585 -189190998 + AluSg/x SINE Alu 134 306 0 2097 123 0 19 chr2 64066106 64066414 -189190169 - AluSx SINE Alu -10 302 1 1080 282 150 37 chr2 64066434 64067106 -189189477 + HAL1 LINE L1 62 857 -1650 2039 97 48 21 chr2 64067106 64067395 -189189188 - AluSq SINE Alu -14 299 3 1080 282 150 37 chr2 64067395 64067593 -189188990 + HAL1 LINE L1 857 1031 -1476 300 220 80 40 chr2 64067635 64067735 -189188848 + HAL1 LINE L1 1033 1136 -1371 241 292 83 0 chr2 64067744 64067864 -189188719 + L1ME LINE L1 41 170 -5900 1693 172 14 4 chr2 64068212 64068515 -189188068 - AluJo SINE Alu 0 306 1 941 130 8 0 chr2 64068520 64068651 -189187932 - FLAM_C SINE Alu -11 132 1 1200 176 5 0 chr2 64068932 64069120 -189187463 - AluJb SINE Alu -15 297 109 288 321 0 0 chr2 64069230 64069336 -189187247 + L1 LINE L1 4085 4190 -1956 1990 155 3 16 chr2 64069485 64069788 -189186795 - AluSx SINE Alu -13 299 1 2025 138 0 10 chr2 64070647 64070952 -189185631 + AluSc SINE Alu 1 302 -7 1737 74 0 0 chr2 64071270 64071486 -189185097 - AluY SINE Alu -20 291 76 25 31 0 0 chr2 64071605 64071637 -189184946 + AT_rich Low_complexity Low_complexity 1 32 0 2427 97 0 0 chr2 64071825 64072134 -189184449 - AluSg SINE Alu -1 309 1 25 51 0 0 chr2 64072530 64072569 -189184014 + AT_rich Low_complexity Low_complexity 1 39 0 21 36 0 0 chr2 64073114 64073142 -189183441 + AT_rich Low_complexity Low_complexity 1 28 0 2446 56 0 7 chr2 64073337 64073640 -189182943 + AluY SINE Alu 2 302 -9 2147 116 0 3 chr2 64074493 64074785 -189181798 + AluSx SINE Alu 1 291 -21 576 263 201 5 chr2 64074785 64074979 -189181604 + MIR SINE MIR 24 255 -7 184 267 0 33 chr2 64076692 64076752 -189179831 + MIR3 SINE MIR 145 202 -6 2484 70 0 0 chr2 64077015 64077316 -189179267 + AluY SINE Alu 1 301 -10 2256 105 10 3 chr2 64078096 64078392 -189178191 + AluSx SINE Alu 1 298 -14 570 149 0 0 chr2 64078438 64078525 -189178058 + 5S rRNA rRNA 1 87 -34 1668 171 24 20 chr2 64079025 64079317 -189177266 + AluJb SINE Alu 1 293 -19 632 297 207 29 chr2 64079338 64079437 -189177146 - L3 LINE CR1 -2 1575 1495 1759 164 45 27 chr2 64079437 64079772 -189176811 - MER2 DNA MER2_type -3 341 1 632 297 207 29 chr2 64079772 64080053 -189176530 - L3 LINE CR1 -82 1495 1127 1308 192 50 17 chr2 64080053 64080355 -189176228 - MLT1D LTR MaLR 0 505 194 818 71 103 0 chr2 64080437 64080563 -189176020 - MER85 DNA T2_type 0 139 1 2053 119 39 0 chr2 64080976 64081261 -189175322 - AluSx SINE Alu -16 296 1 598 230 161 0 chr2 64081765 64081926 -189174657 + MER5A DNA MER1_type 2 188 -1 769 179 32 39 chr2 64082132 64082288 -189174295 - AluSc SINE Alu -14 295 141 2286 107 0 0 chr2 64082866 64083166 -189173417 + AluSx SINE Alu 1 300 -12 1916 167 14 3 chr2 64083235 64083528 -189173055 - AluJb SINE Alu -16 296 1 2349 92 0 16 chr2 64084030 64084344 -189172239 + AluY SINE Alu 1 309 -2 2223 76 0 21 chr2 64084659 64084976 -189171607 + AluSp SINE Alu 1 311 0 199 171 0 0 chr2 64086071 64086106 -189170477 - L2 LINE L2 0 3313 3279 28 29 0 0 chr2 64086902 64086937 -189169646 + AT_rich Low_complexity Low_complexity 1 35 0 1106 148 6 27 chr2 64086984 64087167 -189169416 + AluJb SINE Alu 124 302 -10 2494 90 0 0 chr2 64087173 64087484 -189169099 + AluSq SINE Alu 1 311 -2 2229 82 28 0 chr2 64087490 64087781 -189168802 + AluY SINE Alu 1 299 -12 1605 157 25 62 chr2 64087792 64087928 -189168655 + AluJo SINE Alu 1 140 -172 1581 131 123 15 chr2 64087928 64088196 -189168387 + AluSg1 SINE Alu 1 297 -12 1605 157 25 62 chr2 64088196 64088383 -189168200 + AluJo SINE Alu 140 312 0 247 242 8 55 chr2 64089586 64089714 -189166869 + (CATATA)n Simple_repeat Simple_repeat 2 123 0 22 0 0 0 chr2 64089822 64089844 -189166739 + AT_rich Low_complexity Low_complexity 1 22 0 2198 99 0 32 chr2 64089997 64090311 -189166272 - AluSg SINE Alu -6 304 1 321 221 375 0 chr2 64090367 64090471 -189166112 - MIR SINE MIR -92 170 28 743 166 53 53 chr2 64090485 64090654 -189165929 + MIR SINE MIR 37 205 -57 22 35 0 0 chr2 64091320 64091349 -189165234 + AT_rich Low_complexity Low_complexity 1 29 0 183 80 0 0 chr2 64091423 64091448 -189165135 + (A)n Simple_repeat Simple_repeat 1 25 0 3034 94 52 114 chr2 64092018 64092231 -189164352 + MER39B LTR ERV1 4 229 -424 2360 91 9 31 chr2 64092231 64092551 -189164032 + AluSq SINE Alu 1 313 0 3034 94 52 114 chr2 64092551 64092646 -189163937 + MER39B LTR ERV1 229 328 -325 1724 191 0 28 chr2 64092646 64092966 -189163617 + AluJo SINE Alu 1 311 -1 3034 94 52 114 chr2 64092966 64093324 -189163259 + MER39B LTR ERV1 328 630 -23 240 109 0 4 chr2 64093427 64093628 -189162955 + AluSq SINE Alu 1 287 -15 234 0 0 0 chr2 64093636 64093662 -189162921 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2069 112 0 30 chr2 64093776 64094112 -189162471 + AluSq SINE Alu 1 313 0 1624 112 5 5 chr2 64094902 64095126 -189161457 + AluSx SINE Alu 1 224 -88 1951 118 0 0 chr2 64095126 64095397 -189161186 + AluY SINE Alu 25 295 -16 23 0 0 0 chr2 64095740 64095763 -189160820 + AT_rich Low_complexity Low_complexity 1 23 0 25 75 0 0 chr2 64098882 64098935 -189157648 + AT_rich Low_complexity Low_complexity 1 53 0 383 256 157 8 chr2 64098957 64099339 -189157244 - L1M4 LINE L1 -817 5329 4891 546 277 188 50 chr2 64099403 64099661 -189156922 - L1M4 LINE L1 -1355 4791 4570 1932 89 4 11 chr2 64099661 64099932 -189156651 + AluY SINE Alu 35 303 -8 546 277 188 50 chr2 64099932 64100190 -189156393 - L1M4 LINE L1 -1576 4570 4204 2170 144 0 0 chr2 64100327 64100639 -189155944 - AluSx SINE Alu 0 312 1 254 243 14 0 chr2 64100652 64100726 -189155857 - L1M4 LINE L1 -2189 3957 3883 7313 160 23 25 chr2 64100747 64102167 -189154416 + L1P LINE L1 22 1439 -4707 1787 179 7 3 chr2 64102282 64102567 -189154016 + AluJo SINE Alu 12 297 -15 1974 155 3 0 chr2 64102692 64102988 -189153595 - AluJb SINE Alu -15 297 1 246 32 0 0 chr2 64103082 64103113 -189153470 + (CA)n Simple_repeat Simple_repeat 2 32 0 253 253 44 11 chr2 64103129 64103220 -189153363 - L1MEd LINE L1 -4866 1664 1571 243 0 0 0 chr2 64103471 64103498 -189153085 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1736 159 4 4 chr2 64103506 64103776 -189152807 - AluJb SINE Alu -38 274 5 456 257 70 67 chr2 64103788 64104211 -189152372 - L1MEc LINE L1 -4791 1792 1369 2404 85 0 0 chr2 64104211 64104517 -189152066 + AluY SINE Alu 1 306 -5 456 257 70 67 chr2 64104517 64104596 -189151987 - L1MEc LINE L1 -5214 1369 1292 1745 113 8 8 chr2 64104742 64104999 -189151584 - AluSg SINE Alu 0 310 54 1917 154 4 0 chr2 64105020 64105341 -189151242 - AluSx SINE Alu 0 322 1 2276 105 0 13 chr2 64106013 64106326 -189150257 - AluSg1 SINE Alu 0 309 1 33 43 0 0 chr2 64106356 64106403 -189150180 + AT_rich Low_complexity Low_complexity 1 47 0 1707 147 10 54 chr2 64106721 64107035 -189149548 + AluJo SINE Alu 1 300 -12 715 235 107 24 chr2 64107651 64108032 -189148551 + L1MC5 LINE L1 7154 7495 -547 2281 105 10 0 chr2 64108057 64108362 -189148221 - AluSx SINE Alu -2 310 3 359 303 130 6 chr2 64108372 64108534 -189148049 + L1MC4 LINE L1 7526 7707 -335 1251 180 176 4 chr2 64108578 64108834 -189147749 + AluJo SINE Alu 1 300 -12 1627 181 46 7 chr2 64108846 64109287 -189147296 + L1MB7 LINE L1 5318 5800 -380 922 184 0 43 chr2 64109337 64109522 -189147061 + FRAM SINE Alu 1 170 -6 1506 136 32 0 chr2 64109523 64109774 -189146809 - MER2 DNA MER2_type -86 259 1 633 106 0 0 chr2 64109776 64109870 -189146713 + L1MB7 LINE L1 5830 5923 -255 2214 200 35 24 chr2 64109876 64110387 -189146196 - MER82 DNA MER2_type -6 647 131 932 167 28 37 chr2 64110470 64110686 -189145897 + L1MB7 LINE L1 5922 6135 -49 2011 143 0 7 chr2 64110687 64110973 -189145610 + AluJb SINE Alu 3 286 -26 576 291 73 6 chr2 64112161 64112383 -189144200 - MIR SINE MIR -14 248 16 290 295 116 0 chr2 64112820 64112915 -189143668 + L2 LINE L2 3198 3303 -10 186 371 158 0 chr2 64112919 64113121 -189143462 - L2 LINE L2 -673 2641 2408 * 1033 244 168 33 chr2 64113111 64113655 -189142928 - L2 LINE L2 -1 3312 2702 2157 125 3 13 chr2 64113661 64113974 -189142609 - AluSx SINE Alu -2 310 1 36843 92 17 11 chr2 64114017 64115379 -189141204 + L1PA6 LINE L1 11 1363 -4791 2425 74 3 0 chr2 64115379 64115677 -189140906 + AluSp SINE Alu 1 299 -14 36843 92 17 11 chr2 64115677 64120414 -189136169 + L1PA6 LINE L1 1363 6144 -10 537 164 14 7 chr2 64120419 64120565 -189136018 + (TA)n Simple_repeat Simple_repeat 2 148 0 329 309 36 72 chr2 64120576 64120715 -189135868 - L2 LINE L2 -638 2676 2543 1347 193 7 61 chr2 64120722 64121017 -189135566 + AluJb SINE Alu 16 294 -18 3811 209 84 26 chr2 64121684 64122627 -189133956 + Cheshire DNA MER1_type 1 997 -1423 1384 200 42 8 chr2 64122626 64122891 -189133692 + MSTD LTR MaLR 123 396 0 * 991 106 0 0 chr2 64122891 64123023 -189133560 + AluY SINE Alu 1 132 -179 2845 181 47 11 chr2 64123050 64123620 -189132963 + Cheshire DNA MER1_type 983 1573 -847 1677 188 10 14 chr2 64123634 64123926 -189132657 - AluJo SINE Alu -21 291 1 1445 178 73 11 chr2 64123940 64124227 -189132356 - AluJb SINE Alu -7 305 1 1057 98 0 0 chr2 64124229 64124361 -189132222 - AluSp SINE Alu -181 132 1 3811 170 69 31 chr2 64124365 64125173 -189131410 + Cheshire DNA MER1_type 1582 2420 0 739 272 70 29 chr2 64126198 64126441 -189130142 - MIR SINE MIR 0 262 10 938 206 17 17 chr2 64126619 64126794 -189129789 + FAM SINE Alu 1 175 0 2221 118 0 0 chr2 64126824 64127129 -189129454 - AluSg SINE Alu -5 305 1 2264 88 3 7 chr2 64129167 64129462 -189127121 + AluSp SINE Alu 1 294 -19 2140 102 0 0 chr2 64129784 64130059 -189126524 + AluSx SINE Alu 16 290 -22 882 195 21 11 chr2 64130385 64130575 -189126008 - AluY SINE Alu -119 192 1 494 300 89 30 chr2 64130584 64131079 -189125504 - L1ME LINE L1 -343 5888 5366 465 214 0 0 chr2 64131116 64131219 -189125364 + (TATATG)n Simple_repeat Simple_repeat 2 104 0 1885 141 3 10 chr2 64131220 64131519 -189125064 - AluJb SINE Alu -15 297 1 2240 91 0 11 chr2 64131653 64131963 -189124620 - AluSq SINE Alu 0 307 1 250 194 0 0 chr2 64131973 64132035 -189124548 - L1ME LINE L1 -1100 5115 5054 1217 219 44 16 chr2 64132148 64132618 -189123965 - L1MEc LINE L1 -3653 2562 2126 657 293 179 11 chr2 64132622 64132902 -189123681 - LTR16B LTR ERVL -4 460 134 466 267 62 29 chr2 64133077 64133317 -189123266 - L1MEc LINE L1 -4267 2129 1882 937 133 12 17 chr2 64133428 64133601 -189122982 + AluSx SINE Alu 54 225 -87 191 344 32 21 chr2 64133920 64134013 -189122570 - MER5A DNA MER1_type -82 107 14 267 250 40 0 chr2 64133933 64134009 -189122574 + MER5B DNA MER1_type 97 175 -3 2189 88 7 0 chr2 64134505 64134788 -189121795 + AluSx SINE Alu 16 300 -12 2186 71 21 4 chr2 64134826 64135106 -189121477 + AluSg SINE Alu 9 293 -17 2103 102 7 3 chr2 64135154 64135480 -189121103 + AluSg1 SINE Alu 1 327 0 1521 162 38 30 chr2 64135482 64135773 -189120810 + AluJo SINE Alu 14 306 0 282 292 29 0 chr2 64136569 64136684 -189119899 - L1ME LINE L1 -548 5616 5499 668 257 143 47 chr2 64136694 64136994 -189119589 - MLT1I LTR MaLR 0 409 81 355 259 35 35 chr2 64137063 64137206 -189119377 - L1M2 LINE L1 -711 5455 5322 1065 141 17 28 chr2 64137206 64137383 -189119200 - MSTD LTR MaLR 0 396 222 594 215 38 4 chr2 64137409 64137735 -189118848 + CT-rich Low_complexity Low_complexity 1 337 0 484 307 93 40 chr2 64138074 64138128 -189118455 - L1ME2 LINE L1 -282 5882 5832 2351 74 10 0 chr2 64138128 64138424 -189118159 - AluY SINE Alu -12 299 1 484 307 93 40 chr2 64138424 64138928 -189117655 - L1ME2 LINE L1 -332 5832 5297 468 235 0 0 chr2 64138952 64139067 -189117516 + (TATATG)n Simple_repeat Simple_repeat 1 115 0 1867 141 3 10 chr2 64139071 64139368 -189117215 - AluJb SINE Alu -17 295 1 400 231 49 31 chr2 64139429 64139502 -189117081 - L1M2 LINE L1 -1004 5142 5072 2123 99 0 14 chr2 64139502 64139809 -189116774 - AluSq SINE Alu 0 307 5 400 231 49 31 chr2 64139809 64139927 -189116656 - L1M2 LINE L1 -1074 5072 4943 300 68 0 23 chr2 64140012 64140056 -189116527 - LTR65 LTR ERV1 -283 386 344 1970 104 0 8 chr2 64140509 64140769 -189115814 - AluSx SINE Alu -22 290 33 2314 104 3 3 chr2 64140936 64141245 -189115338 - AluY SINE Alu -2 309 1 1720 162 13 48 chr2 64141289 64141603 -189114980 + AluJb SINE Alu 1 303 -9 24 67 0 0 chr2 64141698 64141743 -189114840 + AT_rich Low_complexity Low_complexity 1 45 0 2437 49 0 30 chr2 64142476 64142780 -189113803 + AluY SINE Alu 1 295 -16 721 250 70 5 chr2 64143506 64143550 -189113033 + MIR SINE MIR 34 74 -188 1605 154 39 56 chr2 64143550 64143856 -189112727 - AluJb SINE Alu -11 301 1 721 250 70 5 chr2 64143856 64144011 -189112572 + MIR SINE MIR 74 246 -16 2159 88 0 0 chr2 64144183 64144457 -189112126 + AluY SINE Alu 37 310 -1 472 272 103 61 chr2 64145119 64145218 -189111365 + MLT1J LTR MaLR 5 98 -413 2428 82 3 0 chr2 64145218 64145521 -189111062 - AluSp SINE Alu -9 304 1 472 272 103 61 chr2 64145521 64145634 -189110949 + MLT1J LTR MaLR 98 226 -285 4313 122 44 6 chr2 64145634 64146338 -189110245 + L1MA8 LINE L1 5374 6104 -187 822 133 30 0 chr2 64146338 64146473 -189110110 + FRAM SINE Alu 18 156 -20 858 108 166 0 chr2 64146479 64146636 -189109947 + L1MA8 LINE L1 6106 6288 -3 299 214 44 47 chr2 64146745 64146885 -189109698 + MLT1J LTR MaLR 364 448 -2 224 271 103 47 chr2 64147070 64147177 -189109406 + MIR3 SINE MIR 92 204 -4 1271 152 5 46 chr2 64147336 64147553 -189109030 - AluJb SINE Alu -20 292 85 306 299 134 43 chr2 64147867 64148005 -189108578 - MLT1J LTR MaLR -30 481 357 1791 141 38 3 chr2 64148005 64148296 -189108287 - AluSx SINE Alu -11 301 1 306 299 134 43 chr2 64148296 64148411 -189108172 - MLT1J LTR MaLR -154 357 205 2360 85 0 3 chr2 64148424 64148719 -189107864 + AluSq SINE Alu 1 294 -19 798 43 94 34 chr2 64148736 64148853 -189107730 + AluSq/x SINE Alu 2 125 -188 224 333 105 9 chr2 64148975 64149080 -189107503 - MIR SINE MIR -147 115 1 244 159 68 0 chr2 64149258 64149302 -189107281 + L2 LINE L2 3221 3267 -5 418 258 67 8 chr2 64149546 64149666 -189106917 + MIR SINE MIR 20 146 -116 333 59 69 20 chr2 64150272 64150373 -189106210 + (TA)n Simple_repeat Simple_repeat 1 106 0 741 178 16 8 chr2 64150373 64150502 -189106081 - AluJ SINE Alu -7 305 176 727 180 0 0 chr2 64150513 64150624 -189105959 - AluJ SINE Alu -200 112 2 2352 88 0 3 chr2 64150873 64151170 -189105413 + AluSg SINE Alu 2 297 -13 1988 148 0 3 chr2 64151539 64151842 -189104741 - AluJo SINE Alu -10 302 1 25 37 0 37 chr2 64151871 64151893 -189104690 + AT_rich Low_complexity Low_complexity 1 22 -30 1617 190 3 20 chr2 64151893 64152188 -189104395 + AluJo SINE Alu 1 290 -22 25 37 0 37 chr2 64152188 64152219 -189104364 + AT_rich Low_complexity Low_complexity 22 52 0 775 153 0 87 chr2 64152439 64152589 -189103994 - FLAM_A SINE Alu 0 142 6 30 27 0 0 chr2 64153352 64153389 -189103194 + AT_rich Low_complexity Low_complexity 1 37 0 491 246 17 0 chr2 64153612 64153730 -189102853 - L1ME2 LINE L1 -27 6137 6018 393 158 0 99 chr2 64153784 64153833 -189102750 - L1MB7 LINE L1 -7 6177 6141 761 124 54 16 chr2 64153833 64153962 -189102621 + L1MB3 LINE L1 6048 6181 -2 393 158 0 99 chr2 64153962 64154013 -189102570 - L1MB7 LINE L1 -43 6141 6087 1743 168 18 0 chr2 64154021 64154307 -189102276 - AluSx SINE Alu -21 291 1 930 137 0 0 chr2 64154568 64154699 -189101884 - FLAM_C SINE Alu 0 133 3 1750 161 7 10 chr2 64154864 64155162 -189101421 - AluJb SINE Alu -15 297 1 36 0 0 0 chr2 64155303 64155339 -189101244 + AT_rich Low_complexity Low_complexity 1 36 0 2098 95 0 7 chr2 64155587 64155898 -189100685 - AluY SINE Alu 0 309 1 2166 75 4 7 chr2 64156374 64156652 -189099931 + AluSx SINE Alu 16 292 -20 4335 168 159 32 chr2 64156657 64157723 -189098860 - Charlie1a DNA MER1_type -248 1207 1 2287 78 6 35 chr2 64158425 64158744 -189097839 - AluY SINE Alu -1 310 1 759 84 0 0 chr2 64158881 64158976 -189097607 + AluSp/q SINE Alu 200 294 -19 2119 90 41 7 chr2 64158992 64159282 -189097301 + AluSx SINE Alu 1 300 -12 474 167 24 0 chr2 64159328 64159412 -189097171 - AluJ/FRAM SINE Alu -9 303 218 640 126 118 79 chr2 64159443 64159570 -189097013 - FLAM_C SINE Alu -1 132 1 324 0 0 0 chr2 64159880 64159916 -189096667 + (CA)n Simple_repeat Simple_repeat 2 37 0 24 0 0 0 chr2 64160850 64160874 -189095709 + GC_rich Low_complexity Low_complexity 1 24 0 2333 53 0 14 chr2 64162013 64162296 -189094287 + AluSc SINE Alu 1 278 -31 190 0 0 0 chr2 64162296 64162317 -189094266 + (CAA)n Simple_repeat Simple_repeat 2 180 0 387 293 167 20 chr2 64162992 64163190 -189093393 - MIR SINE MIR 0 262 36 770 246 144 0 chr2 64163316 64163531 -189093052 - MIR SINE MIR -15 247 2 222 277 148 10 chr2 64163703 64163804 -189092779 - MIR SINE MIR 0 262 148 233 241 45 27 chr2 64164258 64164370 -189092213 + L1ME4a LINE L1 5967 6080 -41 403 133 120 0 chr2 64164533 64164608 -189091975 - AluJ/FRAM SINE Alu -13 299 216 * 709 193 20 27 chr2 64164603 64164753 -189091830 - FAM SINE Alu -36 149 1 281 123 0 18 chr2 64164764 64164821 -189091762 + (TG)n Simple_repeat Simple_repeat 1 56 0 643 175 0 56 chr2 64164821 64164947 -189091636 - FLAM_C SINE Alu -23 120 2 900 111 0 44 chr2 64164982 64165117 -189091466 - AluSg/x SINE Alu -13 297 169 1496 169 0 78 chr2 64165250 64165387 -189091196 + AluJo SINE Alu 17 163 -149 2160 105 3 10 chr2 64165387 64165683 -189090900 + AluSx SINE Alu 6 299 -13 1496 169 0 78 chr2 64165683 64165865 -189090718 + AluJo SINE Alu 163 311 -1 21 71 0 0 chr2 64165914 64165956 -189090627 + AT_rich Low_complexity Low_complexity 1 42 0 1311 158 9 9 chr2 64166268 64166489 -189090094 + AluSp SINE Alu 93 313 0 784 177 0 0 chr2 64166792 64166916 -189089667 + FLAM_C SINE Alu 2 125 -8 2076 117 0 3 chr2 64166924 64167243 -189089340 + AluSg SINE Alu 1 318 0 2212 110 10 0 chr2 64167386 64167685 -189088898 + AluSp SINE Alu 1 302 -11 2214 216 69 47 chr2 64168209 64168711 -189087872 - L1ME1 LINE L1 -5 6161 5638 2289 98 0 3 chr2 64168711 64169017 -189087566 - AluSq SINE Alu -8 305 1 2214 216 69 47 chr2 64169017 64169213 -189087370 - L1ME1 LINE L1 -528 5638 5448 189 309 15 29 chr2 64170333 64170401 -189086182 + L2 LINE L2 3000 3066 -206 685 242 0 0 chr2 64170652 64170784 -189085799 - FLAM_A SINE Alu 0 133 2 2204 113 0 0 chr2 64170944 64171237 -189085346 + AluSx SINE Alu 1 293 -19 24 0 0 0 chr2 64171426 64171450 -189085133 + AT_rich Low_complexity Low_complexity 1 24 0 922 205 29 13 chr2 64171467 64171706 -189084877 - L1MB7 LINE L1 -46 6138 5896 189 0 0 0 chr2 64172130 64172151 -189084432 + (TA)n Simple_repeat Simple_repeat 2 22 0 2054 146 0 0 chr2 64172167 64172476 -189084107 - AluJb SINE Alu -3 309 1 552 255 139 4 chr2 64172476 64172748 -189083835 - L1MC4a LINE L1 -176 5945 5639 419 346 118 35 chr2 64172826 64173257 -189083326 - L2 LINE L2 -2 3270 2804 2255 307 141 24 chr2 64173302 64174176 -189082407 - L2 LINE L2 -609 2705 1935 2022 119 20 0 chr2 64174176 64174470 -189082113 - AluSx SINE Alu -12 300 1 2255 307 141 24 chr2 64174470 64175108 -189081475 - L2 LINE L2 -1379 1935 1016 2306 66 17 0 chr2 64175518 64175806 -189080777 + AluY SINE Alu 1 293 -18 2108 102 21 3 chr2 64175821 64176105 -189080478 + AluSx SINE Alu 1 289 -23 2187 100 30 13 chr2 64176158 64176459 -189080124 + AluSc SINE Alu 1 306 -3 462 224 61 79 chr2 64176471 64176602 -189079981 + L1ME3A LINE L1 5338 5465 -697 2020 126 3 23 chr2 64176602 64176904 -189079679 - AluSx SINE Alu -16 296 1 462 224 61 79 chr2 64176904 64177000 -189079583 + L1ME3A LINE L1 5465 5561 -601 640 264 77 67 chr2 64177010 64177194 -189079389 + L1ME3A LINE L1 5670 5851 -319 1924 159 0 10 chr2 64177194 64177503 -189079080 - AluJb SINE Alu -4 308 3 640 264 77 67 chr2 64177503 64177814 -189078769 + L1ME3A LINE L1 5851 6170 0 2329 70 37 0 chr2 64178267 64178566 -189078017 + AluY SINE Alu 1 310 -1 890 97 0 0 chr2 64178853 64178966 -189077617 + AluSq/x SINE Alu 1 113 -199 1949 136 7 3 chr2 64179165 64179460 -189077123 + AluSx SINE Alu 1 296 -16 800 172 89 5 chr2 64179462 64179665 -189076918 + Charlie1 DNA MER1_type 2538 2757 -4 1532 58 29 29 chr2 64180116 64180324 -189076259 + AluSc SINE Alu 87 294 -15 2208 97 7 0 chr2 64180324 64180622 -189075961 + AluSq SINE Alu 1 301 -12 2315 94 0 0 chr2 64180850 64181157 -189075426 + AluSc SINE Alu 3 309 0 22 70 0 0 chr2 64182001 64182044 -189074539 + AT_rich Low_complexity Low_complexity 1 43 0 2093 136 0 0 chr2 64182062 64182356 -189074227 - AluJb SINE Alu -18 294 1 812 81 0 0 chr2 64182470 64182569 -189074014 - FLAM_C SINE Alu -34 109 11 2229 95 3 0 chr2 64182947 64183241 -189073342 + AluSg SINE Alu 1 295 -15 1220 154 0 73 chr2 64183798 64183995 -189072588 - AluJo SINE Alu -6 306 127 2484 68 0 0 chr2 64183995 64184290 -189072293 + AluY SINE Alu 1 295 -16 1220 154 0 73 chr2 64184290 64184326 -189072257 - AluJo SINE Alu -185 127 90 1744 143 25 0 chr2 64184382 64184661 -189071922 - AluJo SINE Alu -26 286 1 21 71 0 0 chr2 64184670 64184712 -189071871 + AT_rich Low_complexity Low_complexity 1 42 0 712 199 7 0 chr2 64184843 64184979 -189071604 + FAM SINE Alu 35 171 -14 1486 269 122 15 chr2 64185001 64185614 -189070969 - L2 LINE L2 -453 2861 2183 1465 218 51 70 chr2 64185686 64185924 -189070659 - L1M4 LINE L1 -1140 5006 4765 2274 105 0 0 chr2 64185924 64186218 -189070365 - AluSq SINE Alu -19 294 1 1465 218 51 70 chr2 64186218 64186547 -189070036 - L1M4 LINE L1 -1381 4765 4450 776 211 17 34 chr2 64186560 64186735 -189069848 - FRAM SINE Alu -4 172 1 237 83 67 33 chr2 64186742 64186802 -189069781 + (TTAAA)n Simple_repeat Simple_repeat 1 62 0 307 322 126 0 chr2 64186873 64187016 -189069567 - L2 LINE L2 -1192 2122 1962 569 257 37 28 chr2 64187024 64187238 -189069345 - L2 LINE L2 -1481 1833 1618 501 246 123 11 chr2 64187441 64187620 -189068963 - MIR SINE MIR -1 261 63 1301 164 58 51 chr2 64187681 64187974 -189068609 + AluJo SINE Alu 1 295 -17 2263 109 0 6 chr2 64187977 64188288 -189068295 + AluSc SINE Alu 1 309 0 201 171 0 0 chr2 64188892 64188927 -189067656 + (TA)n Simple_repeat Simple_repeat 1 35 0 2105 115 0 3 chr2 64188940 64189226 -189067357 - AluSg SINE Alu -25 285 1 2029 134 20 0 chr2 64189636 64189934 -189066649 + AluSx SINE Alu 1 304 -8 1153 136 6 0 chr2 64189934 64190103 -189066480 + AluSp SINE Alu 134 303 -10 550 156 0 0 chr2 64190235 64190312 -189066271 - AluJo/FRAM SINE Alu -47 265 189 1440 160 72 0 chr2 64190312 64190549 -189066034 + AluJo SINE Alu 21 274 -38 359 115 0 0 chr2 64190801 64190862 -189065721 - AluS SINE Alu -239 61 1 2406 91 7 0 chr2 64191003 64191312 -189065271 + AluSx SINE Alu 1 311 -1 1859 161 3 13 chr2 64191775 64192079 -189064504 + AluJb SINE Alu 1 301 -11 270 154 3 7 chr2 64192240 64192302 -189064281 + Alu SINE Alu 253 301 -1 1987 123 65 0 chr2 64192515 64192792 -189063791 + AluSx SINE Alu 2 296 -16 24 32 0 0 chr2 64192873 64192904 -189063679 + AT_rich Low_complexity Low_complexity 1 31 0 205 226 132 0 chr2 64193830 64193883 -189062700 - L2 LINE L2 -8 3264 3205 23 68 0 0 chr2 64194040 64194084 -189062499 + AT_rich Low_complexity Low_complexity 1 44 0 1891 102 112 18 chr2 64194560 64194845 -189061738 - AluSx SINE Alu 0 312 1 367 227 59 8 chr2 64194850 64194969 -189061614 - LTR37B LTR ERV1 -31 437 313 621 161 155 0 chr2 64194976 64195131 -189061452 - L1ME1 LINE L1 -201 5965 5787 690 178 68 129 chr2 64195140 64195160 -189061423 - LTR37B LTR ERV1 -162 306 286 2106 109 0 17 chr2 64195160 64195290 -189061293 + AluSq SINE Alu 7 138 -175 2234 110 3 0 chr2 64195290 64195590 -189060993 + AluSx SINE Alu 1 301 -11 2106 109 0 17 chr2 64195590 64195753 -189060830 + AluSq SINE Alu 138 295 -18 690 178 68 129 chr2 64195753 64196004 -189060579 - LTR37B LTR ERV1 -182 286 56 2546 60 0 0 chr2 64196004 64196305 -189060278 + AluY SINE Alu 1 301 -10 690 178 68 129 chr2 64196305 64196358 -189060225 - LTR37B LTR ERV1 -412 56 1 5062 198 91 51 chr2 64196453 64197382 -189059201 - L1ME1 LINE L1 -4 6162 5272 2168 112 13 0 chr2 64197382 64197685 -189058898 - AluSx SINE Alu -5 307 1 5062 198 91 51 chr2 64197685 64199003 -189057580 - L1ME1 LINE L1 -894 5272 4008 1947 213 73 12 chr2 64199003 64199483 -189057100 - LTR22 LTR ERVK 0 509 1 5062 198 91 51 chr2 64199483 64199562 -189057021 - L1ME1 LINE L1 -2158 4008 3934 1666 172 7 7 chr2 64199562 64199847 -189056736 - AluJo SINE Alu -25 287 3 5062 198 91 51 chr2 64199847 64200226 -189056357 - L1ME1 LINE L1 -2232 3934 3348 1217 141 29 0 chr2 64200239 64200409 -189056174 - AluSc SINE Alu -20 289 115 321 282 36 36 chr2 64200409 64200519 -189056064 + L1 LINE L1 2444 2553 -3593 924 140 0 0 chr2 64200528 64200664 -189055919 + AluSg/x SINE Alu 167 302 -10 507 246 77 23 chr2 64201053 64201273 -189055310 + L1MC4a LINE L1 5792 6023 -1785 43 64 0 0 chr2 64201357 64201435 -189055148 + AT_rich Low_complexity Low_complexity 1 78 0 2105 133 0 17 chr2 64201663 64201964 -189054619 + AluJo SINE Alu 1 296 -16 484 259 151 6 chr2 64202000 64202166 -189054417 + MIR SINE MIR 48 237 -25 2111 114 4 0 chr2 64203119 64203430 -189053153 - AluSq SINE Alu 0 312 1 2181 109 26 7 chr2 64203445 64203749 -189052834 - AluSg SINE Alu 0 310 1 1170 170 188 33 chr2 64204161 64204565 -189052018 + L1ME1 LINE L1 5027 5367 -992 1921 151 0 13 chr2 64204565 64204863 -189051720 + AluJb SINE Alu 1 294 -18 1170 170 188 33 chr2 64204863 64205092 -189051491 + L1ME1 LINE L1 5367 5778 -581 2178 93 3 10 chr2 64205110 64205399 -189051184 + AluSc SINE Alu 1 287 -22 1367 165 30 9 chr2 64205401 64205631 -189050952 + AluJb SINE Alu 65 299 -13 1225 226 51 17 chr2 64205631 64205972 -189050611 + L1ME1 LINE L1 5824 6333 -1 427 257 96 0 chr2 64206634 64206770 -189049813 + MER46C DNA MER2_type 1 149 -189 2144 115 0 20 chr2 64208699 64209004 -189047579 + AluSx SINE Alu 1 299 -13 1948 146 7 20 chr2 64209307 64209608 -189046975 + AluJo SINE Alu 1 297 -15 444 210 8 42 chr2 64210019 64210138 -189046445 + MIR SINE MIR 148 262 0 223 218 69 35 chr2 64210788 64210875 -189045708 + L2 LINE L2 1983 2072 -1242 972 293 127 77 chr2 64210913 64211410 -189045173 + L2 LINE L2 2272 2742 -571 1756 122 0 4 chr2 64211410 64211655 -189044928 + AluSg SINE Alu 1 244 -66 972 293 127 77 chr2 64211655 64212088 -189044495 + L2 LINE L2 2742 3271 -42 1289 186 39 91 chr2 64212574 64212880 -189043703 + L1MB5 LINE L1 1179 1499 -4885 2362 94 0 0 chr2 64212880 64213179 -189043404 + AluY SINE Alu 1 299 -12 1289 186 39 91 chr2 64213179 64213264 -189043319 + L1MB5 LINE L1 1499 1587 -4797 1596 159 0 40 chr2 64213264 64213387 -189043196 + AluJo SINE Alu 3 129 -183 2283 98 0 3 chr2 64213387 64213683 -189042900 - AluSq SINE Alu -18 295 1 1596 159 0 40 chr2 64213683 64213855 -189042728 + AluJo SINE Alu 129 286 -26 1289 186 39 91 chr2 64213855 64214053 -189042530 + L1MB5 LINE L1 1587 1736 -4648 2216 106 0 0 chr2 64214053 64214356 -189042227 + AluSq SINE Alu 3 305 -8 1289 186 39 91 chr2 64214356 64214392 -189042191 + L1MB5 LINE L1 1736 1772 -4612 286 235 136 19 chr2 64214803 64214965 -189041618 + L1MB5 LINE L1 2042 2222 -4341 368 282 47 59 chr2 64214976 64215146 -189041437 - L1M4c LINE L1 -4046 2338 2171 526 287 28 0 chr2 64215147 64215328 -189041255 + L1MB5 LINE L1 3576 3761 -2621 7156 182 51 23 chr2 64215331 64215556 -189041027 + L1MB5 LINE L1 3902 4119 -2291 2128 86 58 0 chr2 64215556 64215848 -189040735 + AluSg SINE Alu 1 309 -1 7156 182 51 23 chr2 64215848 64217859 -189038724 + L1MB5 LINE L1 4119 6218 -192 2075 111 0 17 chr2 64217859 64218157 -189038426 + AluSx SINE Alu 1 293 -19 7156 182 51 23 chr2 64218157 64218356 -189038227 + L1MB5 LINE L1 6218 6410 0 908 131 0 0 chr2 64218360 64218497 -189038086 + FLAM_C SINE Alu 1 137 -6 1708 151 41 39 chr2 64218500 64218864 -189037719 + L1MB8 LINE L1 5813 6177 -1 242 274 83 12 chr2 64218998 64219082 -189037501 - MIR SINE MIR -103 159 70 445 187 66 0 chr2 64219104 64219195 -189037388 + MIR SINE MIR 166 262 0 2027 80 7 11 chr2 64219502 64219776 -189036807 + AluSc SINE Alu 1 273 -36 1676 83 0 18 chr2 64219794 64220023 -189036560 + AluSx SINE Alu 1 225 -87 247 287 46 0 chr2 64220344 64220431 -189036152 - MER5B DNA MER1_type -84 94 4 2173 99 7 0 chr2 64220912 64221215 -189035368 + AluSx SINE Alu 1 305 -7 1673 87 26 0 chr2 64221242 64221473 -189035110 + AluSg SINE Alu 1 237 -73 217 98 0 49 chr2 64222322 64222363 -189034220 + (CCCCG)n Simple_repeat Simple_repeat 5 43 0 230 371 19 9 chr2 64223375 64223480 -189033103 - L2 LINE L2 -521 2793 2688 2400 43 0 16 chr2 64223481 64223785 -189032798 + AluY SINE Alu 1 299 -12 216 328 127 35 chr2 64224000 64224424 -189032159 - L2 LINE L2 -1154 2160 1698 288 129 29 29 chr2 64225129 64225199 -189031384 + CT-rich Low_complexity Low_complexity 1 70 0 1478 182 6 67 chr2 64225199 64225528 -189031055 - AluJb SINE Alu -3 309 1 2450 48 0 0 chr2 64225537 64225829 -189030754 - AluY SINE Alu -19 292 1 685 250 54 114 chr2 64225844 64226072 -189030511 + L1MC4a LINE L1 5606 5846 -1962 1637 146 50 0 chr2 64226072 64226353 -189030230 + AluJo SINE Alu 7 301 -11 685 250 54 114 chr2 64226353 64226560 -189030023 + L1MC4a LINE L1 5846 6002 -1806 2170 109 0 3 chr2 64226560 64226864 -189029719 + AluSg SINE Alu 1 303 -7 685 250 54 114 chr2 64226864 64226987 -189029596 + L1MC4a LINE L1 6002 6131 -1677 1871 156 3 0 chr2 64227021 64227322 -189029261 + AluJb SINE Alu 3 304 -8 802 267 73 29 chr2 64227354 64227627 -189028956 - Charlie2 DNA MER1_type -2451 331 47 325 303 41 8 chr2 64227633 64227755 -189028828 + L2 LINE L2 1794 1919 -1395 2104 117 7 0 chr2 64227887 64228194 -189028389 + AluSx SINE Alu 1 309 -3 4758 113 29 43 chr2 64228364 64228620 -189027963 - MER4E LTR ERV1 0 779 521 1973 127 3 3 chr2 64228620 64228919 -189027664 - AluSx SINE Alu -13 299 1 4758 113 29 43 chr2 64228919 64229450 -189027133 - MER4E LTR ERV1 -258 521 3 21 0 0 0 chr2 64229602 64229623 -189026960 + AT_rich Low_complexity Low_complexity 1 21 0 2265 53 0 3 chr2 64230038 64230320 -189026263 - AluY SINE Alu -30 281 1 27 39 0 19 chr2 64230392 64230415 -189026168 + AT_rich Low_complexity Low_complexity 1 23 -28 2006 93 7 13 chr2 64230415 64230716 -189025867 + AluSx SINE Alu 1 299 -13 27 39 0 19 chr2 64230716 64230744 -189025839 + AT_rich Low_complexity Low_complexity 23 51 0 309 338 0 62 chr2 64231316 64231461 -189025122 + L1MC4a LINE L1 5265 5400 -2408 2140 99 13 0 chr2 64231471 64231775 -189024808 - AluSx SINE Alu -4 308 1 489 180 11 11 chr2 64231804 64231893 -189024690 - AluJb SINE Alu -68 244 156 1333 269 92 16 chr2 64231922 64232486 -189024097 + L1MC4a LINE L1 5455 6061 -1747 2224 84 0 16 chr2 64232606 64232915 -189023668 + AluSc SINE Alu 1 304 -5 1449 163 22 61 chr2 64232921 64233234 -189023349 + AluJb SINE Alu 2 302 0 561 224 122 0 chr2 64233256 64233403 -189023180 - AluJb SINE Alu -1 311 147 476 238 70 43 chr2 64233475 64233731 -189022852 - L1ME LINE L1 -590 5572 5310 1937 112 0 3 chr2 64233810 64234096 -189022487 - AluSx SINE Alu -5 307 23 364 120 50 0 chr2 64234148 64234248 -189022335 + (TA)n Simple_repeat Simple_repeat 1 105 0 2047 112 3 0 chr2 64234248 64234535 -189022048 - AluSq SINE Alu -25 288 1 26 0 0 0 chr2 64234543 64234569 -189022014 + AT_rich Low_complexity Low_complexity 1 26 0 522 175 133 0 chr2 64234629 64234749 -189021834 - L1M4 LINE L1 -765 5381 5246 1162 137 6 0 chr2 64234772 64234954 -189021629 - AluSg/x SINE Alu -18 294 112 689 145 32 8 chr2 64234954 64235078 -189021505 + L1MC1 LINE L1 6207 6333 0 2138 103 10 3 chr2 64235619 64235921 -189020662 - AluSx SINE Alu -2 310 7 242 211 58 48 chr2 64236659 64236763 -189019820 + MER88 LTR ERVL 80 184 -280 * 865 257 124 61 chr2 64236689 64237084 -189019499 - MER74A LTR ERVL -87 471 44 2307 84 0 0 chr2 64237084 64237381 -189019202 + AluSg SINE Alu 1 297 -13 865 257 124 61 chr2 64237381 64237428 -189019155 - MER74A LTR ERVL -514 44 1 2295 188 84 23 chr2 64237431 64237905 -189018678 - MLT1F1 LTR MaLR 0 567 65 2434 70 0 0 chr2 64238309 64238610 -189017973 + AluY SINE Alu 2 302 -9 2265 89 3 0 chr2 64238615 64238919 -189017664 + AluSq SINE Alu 1 305 -8 2200 71 27 0 chr2 64238925 64239219 -189017364 + AluSp SINE Alu 4 305 -8 2172 75 0 7 chr2 64239346 64239628 -189016955 - AluY SINE Alu -29 282 3 559 56 14 0 chr2 64239728 64239800 -189016783 - Alu SINE Alu -236 74 2 2295 188 84 23 chr2 64240203 64240677 -189015906 + MLT1F1 LTR MaLR 65 567 0 862 262 124 61 chr2 64240680 64240727 -189015856 + MER74A LTR ERVL 1 44 -514 2296 84 0 0 chr2 64240727 64241023 -189015560 - AluSg SINE Alu -14 296 1 862 262 124 61 chr2 64241023 64241418 -189015165 + MER74A LTR ERVL 44 471 -87 242 211 58 48 chr2 64241344 64241448 -189015135 - MER88 LTR ERVL -280 184 80 * 2166 96 10 3 chr2 64242186 64242487 -189014096 + AluSx SINE Alu 7 309 -3 689 145 32 8 chr2 64243030 64243154 -189013429 - L1MC1 LINE L1 0 6333 6207 1249 131 0 0 chr2 64243154 64243337 -189013246 + AluSg/x SINE Alu 110 292 -18 522 175 133 0 chr2 64243360 64243480 -189013103 + L1M4 LINE L1 5246 5381 -765 26 0 0 0 chr2 64243540 64243566 -189013017 + AT_rich Low_complexity Low_complexity 1 26 0 1853 109 18 3 chr2 64243574 64243858 -189012725 + AluSq SINE Alu 1 288 -25 364 120 50 0 chr2 64243858 64243958 -189012625 + (TA)n Simple_repeat Simple_repeat 1 105 0 1954 108 0 3 chr2 64244010 64244296 -189012287 + AluSx SINE Alu 23 307 -5 476 238 70 43 chr2 64244375 64244631 -189011952 + L1ME LINE L1 5310 5572 -590 557 218 127 0 chr2 64244703 64244845 -189011738 + AluJb SINE Alu 147 306 -6 1418 156 19 59 chr2 64244862 64245182 -189011401 - AluJb SINE Alu -5 307 1 2210 87 0 16 chr2 64245187 64245496 -189011087 - AluSc SINE Alu -5 304 1 1348 268 92 16 chr2 64245616 64246180 -189010403 - L1MC4a LINE L1 -1747 6061 5455 489 180 11 11 chr2 64246209 64246298 -189010285 + AluJb SINE Alu 156 244 -68 2270 86 3 0 chr2 64246327 64246630 -189009953 + AluSq SINE Alu 1 304 -9 2038 110 21 0 chr2 64246636 64246926 -189009657 + AluSq SINE Alu 4 299 -14 2220 165 8 0 chr2 64246943 64247313 -189009270 + L1MC3 LINE L1 7392 7764 -21 2104 111 3 32 chr2 64247444 64247760 -189008823 + AluSx SINE Alu 1 307 -5 2077 82 7 0 chr2 64248176 64248484 -189008099 - AluY SINE Alu 0 310 1 1687 159 7 10 chr2 64248580 64248869 -189007714 + AluJo SINE Alu 1 288 -24 821 168 0 21 chr2 64248920 64249063 -189007520 + FLAM_C SINE Alu 1 140 -3 1745 156 20 7 chr2 64249266 64249568 -189007015 + AluJb SINE Alu 1 306 -6 294 312 97 0 chr2 64249570 64249663 -189006920 - MER5C DNA MER1_type -220 104 3 228 67 0 0 chr2 64249687 64249717 -189006866 + (ATTG)n Simple_repeat Simple_repeat 2 31 0 2075 76 3 21 chr2 64249717 64250005 -189006578 - AluSx SINE Alu -29 283 1 462 241 53 82 chr2 64250117 64250324 -189006259 - MLT1K LTR MaLR 0 588 388 233 339 184 0 chr2 64250325 64250434 -189006149 - MLT1K LTR MaLR -315 273 145 2130 156 100 26 chr2 64251150 64251579 -189005004 - LOR1b LTR ERV1 0 461 1 2088 96 3 10 chr2 64251633 64251957 -189004626 - AluSc SINE Alu 0 309 1 2143 113 3 0 chr2 64251957 64252257 -189004326 - AluSx SINE Alu -11 301 1 5159 147 30 21 chr2 64252460 64252825 -189003758 - L1MB3 LINE L1 0 6183 5823 1955 115 10 14 chr2 64252825 64253121 -189003462 - AluSq SINE Alu -18 295 1 5159 147 30 21 chr2 64253121 64253175 -189003408 - L1MB3 LINE L1 -360 5823 5771 1970 98 69 0 chr2 64253175 64253451 -189003132 - AluSx SINE Alu -17 295 1 5159 147 30 21 chr2 64253451 64253997 -189002586 - L1MB3 LINE L1 -412 5771 5218 2483 194 33 6 chr2 64253991 64254511 -189002072 - L1MB3 LINE L1 -2096 4050 3517 * 189 222 111 0 chr2 64254746 64254800 -189001783 + MIR3 SINE MIR 147 206 -2 1871 87 63 0 chr2 64255989 64256276 -189000307 + AluSc SINE Alu 1 305 -4 526 224 61 79 chr2 64256288 64256419 -189000164 + L1ME3A LINE L1 5338 5465 -697 1931 123 3 23 chr2 64256419 64256721 -188999862 - AluSx SINE Alu -16 296 1 526 224 61 79 chr2 64256721 64256817 -188999766 + L1ME3A LINE L1 5465 5561 -601 725 256 88 70 chr2 64256818 64257011 -188999572 + L1ME3A LINE L1 5659 5847 -323 1797 159 0 10 chr2 64257011 64257320 -188999263 - AluJb SINE Alu -4 308 3 725 256 88 70 chr2 64257320 64257629 -188998954 + L1ME3A LINE L1 5847 6170 0 2263 67 44 0 chr2 64258082 64258380 -188998203 + AluY SINE Alu 1 311 0 851 97 0 0 chr2 64258667 64258780 -188997803 + AluSq/x SINE Alu 1 113 -199 226 303 130 6 chr2 64258829 64258991 -188997592 + L1MC4 LINE L1 7526 7707 -335 512 77 66 22 chr2 64259175 64259295 -188997288 + AluSc SINE Alu 195 318 0 258 219 110 41 chr2 64259485 64259558 -188997025 - MIR3 SINE MIR -7 201 124 2184 103 0 0 chr2 64260690 64260982 -188995601 + AluSx SINE Alu 1 292 -20 515 156 10 31 chr2 64261005 64261101 -188995482 + AluJo SINE Alu 86 179 -133 2081 112 0 10 chr2 64261107 64261412 -188995171 + AluSx SINE Alu 1 302 -10 513 158 1 112 chr2 64262109 64262158 -188994425 - L1MB3 LINE L1 -3 6180 6127 2010 136 0 0 chr2 64262158 64262460 -188994123 - AluJb SINE Alu -10 302 1 513 158 1 112 chr2 64262460 64262547 -188994036 - L1MB3 LINE L1 -56 6127 6055 2193 79 20 0 chr2 64262738 64263043 -188993540 - AluY SINE Alu 0 311 1 2359 72 0 10 chr2 64263463 64263767 -188992816 + AluSg SINE Alu 1 301 -9 369 0 0 0 chr2 64264108 64264149 -188992434 + (CA)n Simple_repeat Simple_repeat 2 42 0 264 30 0 0 chr2 64264180 64264213 -188992370 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 2353 46 0 7 chr2 64264216 64264500 -188992083 - AluY SINE Alu -29 282 1 2350 63 14 0 chr2 64264523 64264808 -188991775 - AluY SINE Alu -22 289 1 937 243 115 16 chr2 64264809 64265124 -188991459 - L1MC3 LINE L1 -1 8041 7704 485 257 44 9 chr2 64265173 64265286 -188991297 - MLT1F1 LTR MaLR -431 136 20 630 208 139 6 chr2 64265291 64265464 -188991119 - L1MC4 LINE L1 -1388 6654 6459 27 29 0 0 chr2 64265763 64265797 -188990786 + AT_rich Low_complexity Low_complexity 1 34 0 292 100 300 0 chr2 64265887 64265937 -188990646 + Tigger2 DNA MER2_type 5 69 -2649 * 1689 80 18 58 chr2 64265935 64266142 -188990441 + Tigger2 DNA MER2_type 2280 2475 -243 2194 121 3 0 chr2 64266142 64266439 -188990144 - AluSx SINE Alu -14 298 1 1689 80 18 58 chr2 64266439 64266506 -188990077 + Tigger2 DNA MER2_type 2475 2543 -175 1061 41 0 8 chr2 64266511 64266634 -188989949 + AluY SINE Alu 1 122 -189 542 82 14 0 chr2 64266734 64266807 -188989776 - AluSg SINE Alu -220 90 17 188 208 21 0 chr2 64267525 64267573 -188989010 - L2 LINE L2 -1 3312 3264 2277 102 14 0 chr2 64268294 64268588 -188987995 - AluSx SINE Alu -14 298 1 258 286 113 23 chr2 64268827 64268960 -188987623 + L2 LINE L2 3125 3269 -3 341 189 147 68 chr2 64269053 64269243 -188987340 - MER112 DNA MER1_type -55 205 1 220 195 24 0 chr2 64269318 64269359 -188987224 + L2 LINE L2 3264 3305 -8 496 255 52 39 chr2 64269651 64269829 -188986754 + MIR SINE MIR 1 173 -80 306 73 0 0 chr2 64269857 64269898 -188986685 + MER34B LTR ERV1 25 65 -500 864 162 0 0 chr2 64270345 64270481 -188986102 - FRAM SINE Alu -30 146 11 804 223 1 11 chr2 64270639 64270814 -188985769 + MLT1E LTR MaLR 1 175 -392 2460 87 0 0 chr2 64270819 64271118 -188985465 - AluSc SINE Alu -10 299 1 2399 79 0 7 chr2 64271118 64271421 -188985162 - AluSx SINE Alu -11 301 1 198 167 0 0 chr2 64271456 64271492 -188985091 + CT-rich Low_complexity Low_complexity 2 37 0 263 273 61 10 chr2 64271559 64271658 -188984925 - L1ME LINE L1 -469 5652 5549 1000 185 32 26 chr2 64271662 64271851 -188984732 - Tigger2 DNA MER2_type -10 2708 2519 1595 128 8 0 chr2 64272664 64272899 -188983684 - AluSg SINE Alu -61 249 13 188 208 21 0 chr2 64273613 64273661 -188982922 - L2 LINE L2 -1 3312 3264 250 255 226 34 chr2 64273742 64273977 -188982606 + L2 LINE L2 2854 3133 -180 1806 205 77 2 chr2 64274051 64274480 -188982103 - L1MB7 LINE L1 -1 6183 5723 1134 169 73 5 chr2 64275448 64275667 -188980916 - AluJb SINE Alu -78 234 1 208 234 93 65 chr2 64276074 64276181 -188980402 + MIR SINE MIR 118 227 -35 250 202 22 56 chr2 64276871 64276960 -188979623 + CT-rich Low_complexity Low_complexity 3 88 0 346 215 13 13 chr2 64277040 64277119 -188979464 - MER33 DNA MER1_type 0 324 246 914 169 155 118 chr2 64277124 64277420 -188979163 + AluJo SINE Alu 1 307 -5 1292 149 48 4 chr2 64277420 64277648 -188978935 - MER33 DNA MER1_type -85 239 2 898 219 7 0 chr2 64278300 64278455 -188978128 + L2 LINE L2 3117 3272 0 2148 110 3 7 chr2 64283657 64283967 -188972616 - AluSc SINE Alu 0 309 1 195 129 0 0 chr2 64285783 64285814 -188970769 + (TA)n Simple_repeat Simple_repeat 2 32 0 189 328 16 0 chr2 64285838 64285899 -188970684 - MIR SINE MIR -102 106 45 222 37 0 0 chr2 64287762 64287789 -188968794 + (A)n Simple_repeat Simple_repeat 1 27 0 1016 210 144 30 chr2 64288197 64288502 -188968081 - MER58B DNA MER1_type -1 340 1 526 154 0 13 chr2 64288823 64288901 -188967682 + MER58C DNA MER1_type 2 78 -137 1146 198 20 59 chr2 64288902 64289074 -188967509 - AluJo SINE Alu -21 291 114 2249 88 17 0 chr2 64289074 64289371 -188967212 + AluSp SINE Alu 1 302 -11 1576 135 163 0 chr2 64289377 64289622 -188966961 + AluSg SINE Alu 1 285 -15 1146 198 20 59 chr2 64289622 64289745 -188966838 - AluJo SINE Alu -203 109 1 409 197 48 122 chr2 64289745 64289792 -188966791 + MER58C DNA MER1_type 77 126 -2294 2306 98 3 0 chr2 64289792 64290087 -188966496 + AluSg SINE Alu 1 296 -14 409 197 48 122 chr2 64290087 64290186 -188966397 + MER58C DNA MER1_type 126 212 -3 917 186 0 12 chr2 64290306 64290473 -188966110 - AluSg/x SINE Alu -13 297 133 2408 69 13 0 chr2 64290478 64290783 -188965800 - AluY SINE Alu -2 309 1 2487 72 0 10 chr2 64291203 64291509 -188965074 + AluSg SINE Alu 1 303 -7 1759 177 3 3 chr2 64292058 64292221 -188964362 - AluJb SINE Alu -13 299 134 2376 66 9 31 chr2 64292221 64292538 -188964045 - AluY SINE Alu -1 310 1 1759 177 3 3 chr2 64292538 64292673 -188963910 - AluJb SINE Alu -177 135 1 1481 190 13 13 chr2 64292681 64292981 -188963602 - AluJb SINE Alu -12 300 1 1778 121 50 35 chr2 64293141 64293423 -188963160 + AluSx SINE Alu 1 286 -26 228 295 38 109 chr2 64293476 64293659 -188962924 - MIR SINE MIR -73 189 20 394 176 22 22 chr2 64293659 64293750 -188962833 + MER113 DNA MER1_type? 1 91 -430 1063 157 0 0 chr2 64293752 64293911 -188962672 - FRAM SINE Alu -18 158 1 2120 97 0 7 chr2 64293929 64294207 -188962376 - AluSc SINE Alu -33 276 1 21 36 0 0 chr2 64294224 64294252 -188962331 + AT_rich Low_complexity Low_complexity 1 28 0 469 250 9 0 chr2 64294487 64294595 -188961988 - L1MC/D LINE L1 -2019 5789 5681 2121 117 0 0 chr2 64294737 64295020 -188961563 + AluSg SINE Alu 1 283 -27 252 283 87 36 chr2 64295029 64295167 -188961416 - L1MC/D LINE L1 -2401 5407 5263 369 349 91 45 chr2 64295194 64295411 -188961172 - L1MC/D LINE L1 -914 5232 5026 2294 96 0 0 chr2 64295411 64295704 -188960879 - AluSq SINE Alu -20 293 1 369 349 91 45 chr2 64295704 64295971 -188960612 - L1MC/D LINE L1 -1120 5026 4726 21 36 0 0 chr2 64296081 64296109 -188960474 + AT_rich Low_complexity Low_complexity 1 28 0 1082 165 15 35 chr2 64296218 64296418 -188960165 - AluJb SINE Alu -30 282 87 610 233 87 23 chr2 64297189 64297361 -188959222 - MER3 DNA MER1_type -8 201 19 2258 96 10 7 chr2 64297361 64297662 -188958921 - AluSc SINE Alu -7 302 1 285 213 46 35 chr2 64298387 64298480 -188958103 + L1ME3 LINE L1 5988 6081 -83 22 0 0 0 chr2 64299753 64299775 -188956808 + AT_rich Low_complexity Low_complexity 1 22 0 1504 157 8 20 chr2 64301041 64301296 -188955287 - AluJo SINE Alu -48 264 13 460 224 56 9 chr2 64303713 64303820 -188952763 + L2 LINE L2 3197 3308 -5 261 125 375 14 chr2 64304247 64304319 -188952264 + MER4A LTR ERV1 1 98 -566 1819 124 8 57 chr2 64304319 64304682 -188951901 + MER4A LTR ERV1 261 664 0 6814 134 74 20 chr2 64305560 64306727 -188949856 + Tigger3b DNA MER2_type 1 1230 -1 1175 128 46 50 chr2 64306867 64307085 -188949498 - AluJb SINE Alu -14 298 82 763 125 83 0 chr2 64308247 64308367 -188948216 + AluSq/x SINE Alu 2 131 -181 1699 142 65 0 chr2 64309180 64309455 -188947128 - AluJb SINE Alu -19 293 1 293 274 198 19 chr2 64311680 64311837 -188944746 - MIR SINE MIR -21 241 57 212 200 18 0 chr2 64311848 64311903 -188944680 + (TAA)n Simple_repeat Simple_repeat 2 57 0 364 233 135 62 chr2 64311906 64312099 -188944484 - MIR SINE MIR -46 216 10 21 57 0 0 chr2 64312229 64312264 -188944319 + AT_rich Low_complexity Low_complexity 1 35 0 2534 80 0 0 chr2 64312465 64312776 -188943807 + AluY SINE Alu 1 311 0 2203 126 3 0 chr2 64312783 64313085 -188943498 + AluSx SINE Alu 1 303 -9 228 298 184 21 chr2 64313384 64313525 -188943058 - L3 LINE CR1 -223 1354 1191 2199 88 3 7 chr2 64313820 64314144 -188942439 + AluSg SINE Alu 1 323 0 273 339 40 8 chr2 64314144 64314268 -188942315 - L1ME LINE L1 -504 5617 5490 3416 154 163 95 chr2 64314544 64315077 -188941506 - L1MC3 LINE L1 -7 7778 7283 378 258 54 0 chr2 64315077 64315170 -188941413 - MLT1F1 LTR MaLR -433 134 37 3416 154 163 95 chr2 64315170 64315535 -188941048 - L1MC3 LINE L1 -502 7283 6723 2115 143 0 0 chr2 64315535 64315835 -188940748 + AluSx SINE Alu 1 300 -12 3416 154 163 95 chr2 64315835 64315909 -188940674 - L1MC3 LINE L1 -1062 6723 6655 26 50 0 0 chr2 64315918 64315958 -188940625 + AT_rich Low_complexity Low_complexity 1 40 0 270 0 0 0 chr2 64316298 64316328 -188940255 + (A)n Simple_repeat Simple_repeat 1 30 0 904 222 52 5 chr2 64317046 64317258 -188939325 + MER58A DNA MER1_type 3 224 0 1155 134 179 0 chr2 64318009 64318255 -188938328 - L1MA8 LINE L1 -3 6288 5999 2157 112 3 3 chr2 64318840 64319143 -188937440 - AluJb SINE Alu -9 303 1 651 261 87 0 chr2 64319808 64319969 -188936614 - FRAM SINE Alu 0 176 2 3475 242 70 44 chr2 64319990 64321531 -188935052 - L1MC5 LINE L1 -45 7916 6338 1631 198 27 6 chr2 64321773 64322101 -188934482 + MER82 DNA MER2_type 23 357 -296 833 216 29 0 chr2 64322101 64322272 -188934311 - FAM SINE Alu -9 40 1 1258 266 10 20 chr2 64322275 64322580 -188934003 + MER82 DNA MER2_type 352 653 0 207 100 0 0 chr2 64322581 64322611 -188933972 + (CA)n Simple_repeat Simple_repeat 2 31 0 811 280 108 3 chr2 64322641 64322948 -188933635 - L1MC5 LINE L1 -1888 5920 5582 219 139 0 0 chr2 64323309 64323345 -188933238 + (TTC)n Simple_repeat Simple_repeat 3 38 0 2148 100 14 0 chr2 64323580 64323897 -188932686 + AluSx SINE Alu 2 322 0 347 346 108 0 chr2 64324170 64324355 -188932228 + MIR SINE MIR 2 206 -56 24 0 0 0 chr2 64324884 64324908 -188931675 + AT_rich Low_complexity Low_complexity 1 24 0 475 199 115 32 chr2 64325386 64325542 -188931041 + L1MC4 LINE L1 7873 8041 -1 2333 76 3 0 chr2 64325551 64325840 -188930743 + AluY SINE Alu 1 290 -21 2067 80 7 11 chr2 64325863 64326149 -188930434 + AluY SINE Alu 1 285 -26 1979 161 0 0 chr2 64327161 64327460 -188929123 - AluJb SINE Alu -13 299 1 1863 153 8 62 chr2 64327640 64328025 -188928558 + THE1B LTR MaLR 1 364 0 23 33 0 0 chr2 64328381 64328411 -188928172 + AT_rich Low_complexity Low_complexity 1 30 0 877 53 0 0 chr2 64328604 64328717 -188927866 + L1PA5 LINE L1 6039 6151 -3 257 91 114 0 chr2 64328747 64328791 -188927792 - L1MB8 LINE L1 0 6178 6130 2144 90 10 17 chr2 64329397 64329687 -188926896 - AluSc SINE Alu -21 288 1 29 70 0 0 chr2 64330273 64330330 -188926253 + AT_rich Low_complexity Low_complexity 1 57 0 1522 172 19 0 chr2 64331270 64331537 -188925046 + AluSx SINE Alu 18 289 -23 1960 110 40 4 chr2 64331906 64332203 -188924380 - AluSx SINE Alu 0 307 1 1723 155 3 32 chr2 64332429 64332738 -188923845 + AluJo SINE Alu 1 300 -12 21 71 0 0 chr2 64333268 64333310 -188923273 + AT_rich Low_complexity Low_complexity 1 42 0 236 172 35 0 chr2 64333487 64333545 -188923038 + (TGAG)n Simple_repeat Simple_repeat 3 62 0 1128 130 7 0 chr2 64333558 64333712 -188922871 - AluJb SINE Alu -30 282 128 681 166 129 6 chr2 64333792 64333845 -188922738 + L1MA7 LINE L1 5938 5983 -308 210 71 0 0 chr2 64333845 64333873 -188922710 + (GGGTG)n Simple_repeat Simple_repeat 3 30 0 681 166 129 6 chr2 64333873 64333982 -188922601 + L1MA7 LINE L1 5983 6120 -171 575 395 140 40 chr2 64334185 64334712 -188921871 + L1MC4 LINE L1 7461 8040 -2 1557 198 6 25 chr2 64335099 64335417 -188921166 + AluJb SINE Alu 1 312 0 194 284 135 57 chr2 64335654 64335795 -188920788 + MIR SINE MIR 2 153 -109 2045 121 3 0 chr2 64336475 64336765 -188919818 + AluSx SINE Alu 1 291 -21 2310 148 37 35 chr2 64337549 64337980 -188918603 + Tigger2a DNA MER2_type 1 432 -2 501 239 60 15 chr2 64337982 64338116 -188918467 + LTR50 LTR ERVL 18 157 -638 426 273 90 26 chr2 64338212 64338517 -188918066 + LTR33A LTR ERVL 297 512 -11 27 0 0 0 chr2 64339293 64339320 -188917263 + AT_rich Low_complexity Low_complexity 1 27 0 37 69 0 0 chr2 64339483 64339555 -188917028 + AT_rich Low_complexity Low_complexity 1 72 0 488 221 96 30 chr2 64339770 64339969 -188916614 + L1ME2 LINE L1 4864 5075 -1071 258 212 45 0 chr2 64339995 64340061 -188916522 + L1ME2 LINE L1 5144 5212 -934 2013 255 120 11 chr2 64340151 64340885 -188915698 + L1ME2 LINE L1 5341 6154 -10 1844 144 99 0 chr2 64341073 64341505 -188915078 + L1M4 LINE L1 5267 5764 -406 406 179 11 41 chr2 64341610 64341710 -188914873 + L1MB7 LINE L1 5361 5450 -714 1572 196 181 22 chr2 64341728 64342191 -188914392 + L1MB7 LINE L1 5632 6168 -16 746 78 10 0 chr2 64342474 64342576 -188914007 + MER30B DNA MER1_type 4 106 -84 200 35 35 0 chr2 64342638 64342667 -188913916 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 191 234 0 0 chr2 64342909 64342956 -188913627 - MER5C DNA MER1_type -50 274 228 349 256 23 12 chr2 64342967 64343053 -188913530 - MER5C DNA MER1_type -200 124 38 26 0 0 0 chr2 64343165 64343191 -188913392 + AT_rich Low_complexity Low_complexity 1 26 0 1791 186 0 0 chr2 64343724 64344030 -188912553 + AluJo SINE Alu 5 310 -2 2353 71 0 3 chr2 64344051 64344345 -188912238 + AluY SINE Alu 1 293 -18 1823 127 4 8 chr2 64344438 64344705 -188911878 - AluSq SINE Alu -45 268 3 1561 200 3 7 chr2 64345964 64346273 -188910310 + AluSx SINE Alu 1 308 0 261 253 124 13 chr2 64346605 64346775 -188909808 + L1M2 LINE L1 5389 5588 -709 897 65 0 0 chr2 64347733 64347841 -188908742 - AluSp/q SINE Alu -16 297 190 2166 94 3 55 chr2 64348227 64348555 -188908028 + AluY SINE Alu 1 311 0 434 246 12 82 chr2 64349409 64349458 -188907125 + L2 LINE L2 2174 2225 -1089 1577 207 7 3 chr2 64349458 64349767 -188906816 + AluJo SINE Alu 1 310 -2 434 246 12 82 chr2 64349767 64349888 -188906695 + L2 LINE L2 2225 2332 -982 258 296 82 19 chr2 64350202 64350361 -188906222 + Charlie2 DNA MER1_type 116 284 -2578 1417 231 93 54 chr2 64350369 64350906 -188905677 + MER68 LTR ERV1 1 558 -4 2121 119 0 20 chr2 64351050 64351216 -188905367 - AluSg SINE Alu -13 297 138 2206 84 0 23 chr2 64351216 64351524 -188905059 - AluY SINE Alu -8 303 3 2121 119 0 20 chr2 64351524 64351659 -188904924 - AluSg SINE Alu -172 138 2 294 174 0 0 chr2 64351810 64351854 -188904729 - MLT1A1 LTR MaLR 0 365 322 229 182 0 0 chr2 64351854 64351887 -188904696 + Alu SINE Alu 1 33 -269 979 190 63 68 chr2 64351892 64352235 -188904348 + MSTB LTR MaLR 27 432 0 942 198 137 41 chr2 64352324 64352784 -188903799 + Charlie2 DNA MER1_type 2095 2598 -264 1410 169 26 34 chr2 64352784 64353050 -188903533 - AluJb SINE Alu -26 286 23 247 254 132 34 chr2 64353084 64353289 -188903294 + Charlie2 DNA MER1_type 2638 2862 0 1343 194 28 0 chr2 64353391 64353675 -188902908 - L1MA4 LINE L1 -10 6290 5999 1348 176 38 107 chr2 64353697 64354044 -188902539 + MLT1A1 LTR MaLR 1 320 -45 1986 134 10 0 chr2 64354044 64354342 -188902241 - AluSx SINE Alu -11 301 1 1348 176 38 107 chr2 64354342 64354386 -188902197 + MLT1A1 LTR MaLR 320 365 0 22 0 0 0 chr2 64354397 64354419 -188902164 + AT_rich Low_complexity Low_complexity 1 22 0 1733 99 3 74 chr2 64354608 64354891 -188901692 + AluSx SINE Alu 1 263 -49 377 245 7 71 chr2 64355170 64355325 -188901258 + GA-rich Low_complexity Low_complexity 3 147 0 848 272 89 66 chr2 64355556 64355736 -188900847 + L2 LINE L2 2287 2461 -853 2405 86 0 0 chr2 64355736 64356038 -188900545 + AluY SINE Alu 1 302 -9 848 272 89 66 chr2 64356038 64356328 -188900255 + L2 LINE L2 2461 2768 -546 268 265 150 55 chr2 64356892 64357043 -188899540 + L1ME LINE L1 4569 4704 -1442 2031 130 14 0 chr2 64357043 64357335 -188899248 + AluSx SINE Alu 1 296 -16 268 265 150 55 chr2 64357335 64357530 -188899053 + L1ME LINE L1 4704 4948 -1198 2057 145 0 0 chr2 64357714 64358018 -188898565 + AluSx SINE Alu 1 304 -8 385 273 82 49 chr2 64358093 64358478 -188898105 + L1ME LINE L1 5260 5653 -468 1802 160 0 7 chr2 64358602 64358889 -188897694 + AluJb SINE Alu 1 285 -27 1285 212 68 0 chr2 64358942 64359063 -188897520 + AluJo SINE Alu 1 112 -200 180 0 0 0 chr2 64359063 64359083 -188897500 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 1285 212 68 0 chr2 64359083 64359225 -188897358 + AluJo SINE Alu 112 282 -30 313 241 25 13 chr2 64359388 64359467 -188897116 + MIR SINE MIR 92 171 -91 837 181 0 0 chr2 64360490 64360623 -188895960 + FLAM_C SINE Alu 1 133 0 2767 213 37 48 chr2 64361182 64361399 -188895184 + L1MB7 LINE L1 5357 5575 -609 1874 128 25 4 chr2 64361399 64361680 -188894903 + AluSx SINE Alu 1 287 -25 2767 213 37 48 chr2 64361680 64361724 -188894859 + L1MB7 LINE L1 5575 5618 -566 2034 108 23 13 chr2 64361724 64362029 -188894554 + AluSq SINE Alu 6 313 0 2767 213 37 48 chr2 64362029 64362582 -188894001 + L1MB7 LINE L1 5618 6163 -21 1665 182 3 7 chr2 64362582 64362884 -188893699 + AluJo SINE Alu 1 301 -11 246 196 161 0 chr2 64362887 64362943 -188893640 + AluJ/F(R)AM SINE Alu 138 202 -100 317 163 31 10 chr2 64362968 64363066 -188893517 + (TA)n Simple_repeat Simple_repeat 2 101 0 235 278 19 0 chr2 64363859 64363913 -188892670 + MER91C DNA MER1_type 33 87 -53 26 0 0 0 chr2 64363986 64364012 -188892571 + AT_rich Low_complexity Low_complexity 1 26 0 2103 104 38 0 chr2 64364022 64364311 -188892272 - AluSx SINE Alu -12 300 1 465 240 104 93 chr2 64364426 64364695 -188891888 + L1MC5 LINE L1 7363 7627 -334 1574 152 9 67 chr2 64364695 64365011 -188891572 + AluJo SINE Alu 1 298 -14 465 240 104 93 chr2 64365011 64365270 -188891313 + L1MC5 LINE L1 7627 7897 -64 1037 135 40 178 chr2 64365727 64365781 -188890802 + L1MA9 LINE L1 5988 6048 -264 1955 127 17 10 chr2 64365781 64366081 -188890502 - AluSx SINE Alu -4 308 7 1037 135 40 178 chr2 64366081 64366397 -188890186 + L1MA9 LINE L1 6048 6307 -5 2237 121 0 0 chr2 64366470 64366775 -188889808 - AluSc SINE Alu -4 305 1 1804 148 19 29 chr2 64368703 64369014 -188887569 - AluJb SINE Alu 0 312 5 2337 95 7 0 chr2 64369037 64369343 -188887240 - AluSq SINE Alu -5 308 1 311 356 89 36 chr2 64369364 64369589 -188886994 + L2 LINE L2 2825 3061 -211 2834 133 40 40 chr2 64369922 64370424 -188886159 + Tigger1 DNA MER2_type 1 502 -1916 468 0 0 0 chr2 64370448 64370500 -188886083 + (CA)n Simple_repeat Simple_repeat 1 52 0 2126 75 7 14 chr2 64370895 64371175 -188885408 + AluY SINE Alu 22 299 -12 2150 79 39 0 chr2 64371444 64371723 -188884860 - AluY SINE Alu -21 290 1 1870 161 7 0 chr2 64371725 64372016 -188884567 - AluSq SINE Alu -18 295 3 2048 120 3 3 chr2 64372200 64372484 -188884099 - AluSg1 SINE Alu -23 286 3 22 0 0 0 chr2 64373016 64373038 -188883545 + AT_rich Low_complexity Low_complexity 1 22 0 27 29 0 0 chr2 64373148 64373182 -188883401 + AT_rich Low_complexity Low_complexity 1 34 0 411 21 0 0 chr2 64373599 64373647 -188882936 + (CA)n Simple_repeat Simple_repeat 2 49 0 2003 116 20 10 chr2 64373997 64374289 -188882294 - AluSq SINE Alu -17 296 2 2265 90 0 0 chr2 64374301 64374591 -188881992 - AluSq SINE Alu -23 290 1 24 0 0 0 chr2 64374702 64374726 -188881857 + AT_rich Low_complexity Low_complexity 1 24 0 2051 121 14 0 chr2 64374736 64375025 -188881558 + AluSc SINE Alu 1 293 -16 1817 148 7 20 chr2 64375478 64375781 -188880802 + AluSx SINE Alu 1 299 -13 252 250 0 0 chr2 64376619 64376675 -188879908 + L2 LINE L2 3222 3277 -36 29 78 0 0 chr2 64377394 64377458 -188879125 + AT_rich Low_complexity Low_complexity 1 64 0 840 230 7 0 chr2 64378400 64378552 -188878031 - FRAM SINE Alu -31 145 1 550 136 0 0 chr2 64378652 64378733 -188877850 - AluSg/x SINE Alu -17 292 212 1879 159 30 0 chr2 64378757 64379059 -188877524 + AluSx SINE Alu 1 311 -1 435 276 8 52 chr2 64379089 64379223 -188877360 + L2 LINE L2 3145 3272 0 877 187 35 10 chr2 64379647 64379845 -188876738 - Tigger7 DNA MER2_type -1 2586 2384 411 98 73 12 chr2 64379899 64379981 -188876602 - Tigger7 DNA MER2_type -117 2370 2284 1941 192 122 2 chr2 64379993 64380404 -188876179 - Tigger7 DNA MER2_type -270 463 4 1437 144 144 15 chr2 64380821 64381084 -188875499 + AluSg SINE Alu 1 297 -13 329 277 0 0 chr2 64381216 64381299 -188875284 - MIR SINE MIR -49 213 131 2303 75 0 0 chr2 64381712 64382034 -188874549 + AluY SINE Alu 1 322 0 22 56 0 0 chr2 64382798 64382834 -188873749 + AT_rich Low_complexity Low_complexity 1 36 0 273 119 0 0 chr2 64383181 64383223 -188873360 + (CAG)n Simple_repeat Simple_repeat 1 42 0 2244 118 0 0 chr2 64384530 64384836 -188871747 - AluSx SINE Alu -6 306 1 599 168 0 10 chr2 64385475 64385576 -188871007 + AluJ/FLAM SINE Alu 1 100 -212 1271 210 66 0 chr2 64385652 64385923 -188870660 - AluJb SINE Alu -14 298 10 300 269 50 17 chr2 64386121 64386240 -188870343 + L2 LINE L2 2223 2345 -969 495 298 76 0 chr2 64386284 64386442 -188870141 + MIR SINE MIR 91 260 -2 1304 185 86 0 chr2 64386468 64386711 -188869872 + Tigger7 DNA MER2_type 82 345 -2142 741 145 29 14 chr2 64386705 64386843 -188869740 + Tigger7 DNA MER2_type 2339 2478 -9 * 21 0 0 0 chr2 64387376 64387397 -188869186 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 64387477 64387498 -188869085 + AT_rich Low_complexity Low_complexity 1 21 0 31 58 0 0 chr2 64387766 64387818 -188868765 + AT_rich Low_complexity Low_complexity 1 52 0 1701 101 118 42 chr2 64388419 64388706 -188867877 + AluSc SINE Alu 1 309 0 1246 189 117 4 chr2 64388874 64389138 -188867445 + AluJo SINE Alu 1 294 -8 264 341 94 36 chr2 64389414 64389637 -188866946 - L2 LINE L2 -457 2857 2622 2160 120 3 0 chr2 64389781 64390101 -188866482 + AluSx SINE Alu 3 312 0 1769 184 7 0 chr2 64390193 64390487 -188866096 - AluSx SINE Alu -16 296 1 22 35 0 0 chr2 64391418 64391447 -188865136 + AT_rich Low_complexity Low_complexity 1 29 0 3479 148 60 21 chr2 64391781 64392485 -188864098 + L1MB3 LINE L1 5450 6180 -3 2187 92 48 0 chr2 64392625 64392920 -188863663 + AluSg SINE Alu 1 309 -1 186 40 0 0 chr2 64392920 64392939 -188863644 + (T)n Simple_repeat Simple_repeat 1 19 0 5161 129 18 12 chr2 64392985 64393824 -188862759 - L1PA15 LINE L1 0 6165 5322 1340 124 0 84 chr2 64393824 64393981 -188862602 - AluSg/x SINE Alu -20 290 121 2091 124 7 3 chr2 64393981 64394288 -188862295 - AluSq SINE Alu -5 308 1 2100 110 0 7 chr2 64394294 64394585 -188861998 - AluSg SINE Alu -17 293 5 1340 124 0 84 chr2 64394585 64394646 -188861937 - AluSg/x SINE Alu -194 116 84 1529 185 7 30 chr2 64395160 64395462 -188861121 + AluJo SINE Alu 1 295 -17 802 144 0 0 chr2 64395549 64395667 -188860916 + FLAM_C SINE Alu 1 118 -25 24 53 0 0 chr2 64395868 64395906 -188860677 + AT_rich Low_complexity Low_complexity 1 38 0 28 61 0 0 chr2 64396464 64396513 -188860070 + AT_rich Low_complexity Low_complexity 1 49 0 636 409 0 13 chr2 64397360 64397657 -188858926 + G-rich Low_complexity Low_complexity 1 293 0 391 540 0 0 chr2 64397677 64397801 -188858782 + G-rich Low_complexity Low_complexity 1 124 0 1387 125 0 0 chr2 64397811 64398011 -188858572 + AluSg/x SINE Alu 106 305 -7 463 305 195 0 chr2 64398833 64399105 -188857478 + L2 LINE L2 2825 3149 -164 323 189 0 14 chr2 64399139 64399213 -188857370 + GA-rich Low_complexity Low_complexity 2 74 0 2071 101 7 4 chr2 64400266 64400543 -188856040 - AluSc SINE Alu -19 290 13 180 0 0 0 chr2 64400561 64400581 -188856002 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1953 128 7 0 chr2 64400582 64400856 -188855727 - AluSx SINE Alu -35 277 2 1546 218 37 3 chr2 64401079 64401432 -188855151 + MLT1A1 LTR MaLR 1 365 0 25 0 0 0 chr2 64401672 64401697 -188854886 + AT_rich Low_complexity Low_complexity 1 25 0 2084 102 25 0 chr2 64401708 64401992 -188854591 + AluSg SINE Alu 4 294 -16 373 257 97 65 chr2 64402135 64402427 -188854156 + L1MCa LINE L1 1154 1492 -4832 5920 43 35 0 chr2 64402554 64403325 -188853258 - L1PA5 LINE L1 -796 5350 4553 6764 36 5 0 chr2 64403325 64404130 -188852453 + L1PA5 LINE L1 5334 6150 -4 434 177 48 118 chr2 64404229 64404415 -188852168 + L1MCa LINE L1 1777 1949 -4658 1817 169 0 3 chr2 64404426 64404734 -188851849 + AluJb SINE Alu 1 307 -5 302 291 92 48 chr2 64404734 64404953 -188851630 + L1MCa LINE L1 1170 1401 -5025 1254 256 68 75 chr2 64404991 64405419 -188851164 + HAL1 LINE L1 1043 1473 -1034 1628 164 26 4 chr2 64405419 64405688 -188850895 + AluSx SINE Alu 1 275 -37 264 30 0 0 chr2 64405692 64405725 -188850858 + (CAA)n Simple_repeat Simple_repeat 1 33 0 1254 256 68 75 chr2 64405725 64406120 -188850463 + HAL1 LINE L1 1476 1865 -642 696 298 71 6 chr2 64406854 64407176 -188849407 + L1MC4a LINE L1 5581 5923 -1885 254 122 0 20 chr2 64407182 64407231 -188849352 + (TA)n Simple_repeat Simple_repeat 2 49 0 258 105 0 0 chr2 64407317 64407355 -188849228 + (TA)n Simple_repeat Simple_repeat 2 39 0 586 187 324 67 chr2 64407753 64408068 -188848515 + MSTD LTR MaLR 1 396 0 346 183 0 32 chr2 64408087 64408180 -188848403 + GA-rich Low_complexity Low_complexity 3 92 0 451 231 87 131 chr2 64409324 64409553 -188847030 - MER20 DNA MER1_type 0 219 1 23 0 0 0 chr2 64410263 64410286 -188846297 + AT_rich Low_complexity Low_complexity 1 23 0 27 29 0 0 chr2 64411742 64411776 -188844807 + AT_rich Low_complexity Low_complexity 1 34 0 2006 117 10 13 chr2 64412035 64412333 -188844250 - AluSx SINE Alu -15 297 1 1664 123 15 38 chr2 64412576 64412837 -188843746 + AluSx SINE Alu 1 255 -57 2088 128 0 0 chr2 64412961 64413251 -188843332 + AluSx SINE Alu 1 290 -22 1999 132 3 3 chr2 64413261 64413564 -188843019 + AluSx SINE Alu 1 303 -9 260 179 6 0 chr2 64413629 64413683 -188842900 - Alu SINE Alu -8 294 250 1984 152 0 0 chr2 64413902 64414192 -188842391 + AluSx SINE Alu 1 290 -22 21 0 0 0 chr2 64414477 64414498 -188842085 + AT_rich Low_complexity Low_complexity 1 21 0 34 0 0 0 chr2 64414548 64414582 -188842001 + AT_rich Low_complexity Low_complexity 1 34 0 1747 159 55 3 chr2 64414582 64414871 -188841712 + AluJb SINE Alu 2 305 -7 21 36 0 0 chr2 64415612 64415640 -188840943 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr2 64415989 64416019 -188840564 + AT_rich Low_complexity Low_complexity 1 30 0 4121 176 41 40 chr2 64416062 64416220 -188840363 - MER6 DNA MER2_type 0 865 709 1907 148 7 3 chr2 64416220 64416518 -188840065 + AluSx SINE Alu 1 299 -13 4121 176 41 40 chr2 64416518 64417181 -188839402 - MER6 DNA MER2_type -156 709 43 1568 157 29 52 chr2 64417243 64417385 -188839198 + AluJo SINE Alu 3 147 -165 2096 117 3 0 chr2 64417385 64417683 -188838900 + AluSq SINE Alu 1 299 -14 1568 157 29 52 chr2 64417683 64417846 -188838737 + AluJo SINE Alu 147 301 -11 2334 96 0 3 chr2 64417847 64418148 -188838435 + AluSc SINE Alu 1 300 -9 2342 99 0 3 chr2 64418603 64418917 -188837666 + AluSp SINE Alu 1 313 0 1054 188 20 20 chr2 64419753 64419886 -188836697 + AluJo SINE Alu 1 136 -176 2455 59 0 13 chr2 64419886 64420191 -188836392 + AluY SINE Alu 1 301 -10 1054 188 20 20 chr2 64420191 64420259 -188836324 + AluJo SINE Alu 135 202 -110 1522 190 27 14 chr2 64421149 64421444 -188835139 + AluJb SINE Alu 1 299 -13 24 0 0 0 chr2 64421457 64421481 -188835102 + AT_rich Low_complexity Low_complexity 1 24 0 1698 187 13 29 chr2 64421481 64421946 -188834637 + L1PB4 LINE L1 5727 6166 0 21 36 0 0 chr2 64422278 64422306 -188834277 + AT_rich Low_complexity Low_complexity 1 28 0 1735 110 7 76 chr2 64422882 64423183 -188833400 - AluSx SINE Alu -30 282 3 1987 130 13 10 chr2 64423434 64423741 -188832842 - AluSx SINE Alu -4 308 1 1953 122 13 22 chr2 64424673 64424985 -188831598 + AluSq SINE Alu 4 312 -1 21 82 0 0 chr2 64424985 64425034 -188831549 + AT_rich Low_complexity Low_complexity 1 49 0 2093 121 0 13 chr2 64425671 64425976 -188830607 - AluSp SINE Alu -10 303 3 26 0 0 0 chr2 64426093 64426119 -188830464 + AT_rich Low_complexity Low_complexity 1 26 0 185 227 197 15 chr2 64426403 64426469 -188830114 - MIR SINE MIR -29 233 156 270 290 134 54 chr2 64426744 64426930 -188829653 + MIR SINE MIR 2 202 -60 189 318 0 0 chr2 64428342 64428386 -188828197 + L2 LINE L2 3209 3252 -20 1173 194 31 4 chr2 64429909 64430136 -188826447 - MER46A DNA MER2_type -3 233 1 1445 201 20 10 chr2 64432121 64432414 -188824169 + AluSx SINE Alu 1 296 -6 1503 177 72 4 chr2 64432800 64433077 -188823506 - AluJo SINE Alu -14 298 3 2065 154 0 0 chr2 64433181 64433492 -188823091 + AluSx SINE Alu 1 311 -1 254 237 0 0 chr2 64433590 64433649 -188822934 - L1ME LINE L1 -265 5856 5798 1494 229 62 62 chr2 64433670 64434108 -188822475 - L1ME3A LINE L1 -7 6163 5723 1796 153 7 17 chr2 64434108 64434409 -188822174 - AluJb SINE Alu -14 298 1 1494 229 62 62 chr2 64434409 64434530 -188822053 - L1ME3A LINE L1 -446 5724 5604 1952 145 3 0 chr2 64434693 64434989 -188821594 + AluSx SINE Alu 1 297 -15 274 113 132 0 chr2 64435481 64435534 -188821049 - L1MA10 LINE L1 -18 6316 6257 188 33 0 33 chr2 64436473 64436503 -188820080 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 599 181 17 9 chr2 64436507 64436623 -188819960 - FLAM_C SINE Alu -25 118 2 1811 195 71 36 chr2 64436924 64437525 -188819058 - L1ME LINE L1 -375 5791 5188 1312 272 109 36 chr2 64437599 64438028 -188818555 - L1MB7 LINE L1 -126 6058 5662 1881 185 50 29 chr2 64438028 64438407 -188818176 + MSTB LTR MaLR 1 391 -35 2144 123 0 7 chr2 64438407 64438717 -188817866 - AluSx SINE Alu -3 309 2 1881 185 50 29 chr2 64438717 64438754 -188817829 + MSTB LTR MaLR 391 426 0 1312 272 109 36 chr2 64438754 64438948 -188817635 - L1MB7 LINE L1 -522 5662 5376 2228 116 0 34 chr2 64438948 64439268 -188817315 - AluSx SINE Alu -3 309 1 1312 272 109 36 chr2 64439268 64439339 -188817244 - L1MB7 LINE L1 -808 5376 5312 526 136 68 34 chr2 64440019 64440137 -188816446 - L1MB8 LINE L1 -169 6009 5888 671 217 46 7 chr2 64441449 64441601 -188814982 + MER20 DNA MER1_type 1 158 -61 2169 121 0 3 chr2 64441648 64441945 -188814638 + AluSx SINE Alu 1 296 -16 458 274 118 43 chr2 64442195 64442298 -188814285 - MIR SINE MIR 0 262 168 1487 201 4 7 chr2 64442298 64442567 -188814016 - AluJo SINE Alu -19 293 26 458 274 118 43 chr2 64442567 64442649 -188813934 - MIR SINE MIR -94 168 63 257 318 0 0 chr2 64442824 64442890 -188813693 + MER33 DNA MER1_type 1 66 -258 1380 228 13 42 chr2 64442892 64443203 -188813380 + AluJo SINE Alu 1 302 0 2042 106 33 26 chr2 64443209 64443511 -188813072 + AluSg SINE Alu 1 304 -6 2185 127 0 6 chr2 64443511 64443825 -188812758 + AluSx SINE Alu 1 312 0 580 210 94 6 chr2 64443845 64444026 -188812557 + MER33 DNA MER1_type 50 246 -78 2203 98 0 0 chr2 64444053 64444329 -188812254 - AluSx SINE Alu -36 276 1 254 229 0 29 chr2 64444333 64444403 -188812180 + MER33 DNA MER1_type 274 341 -22 282 56 0 0 chr2 64444530 64444566 -188812017 + (TGG)n Simple_repeat Simple_repeat 3 38 0 2205 96 0 3 chr2 64446214 64446531 -188810052 + AluY SINE Alu 1 311 0 1051 217 0 19 chr2 64447596 64447808 -188808775 + AluJo SINE Alu 1 208 -104 1174 209 17 8 chr2 64448643 64448877 -188807706 - MER46A DNA MER2_type 0 236 1 228 152 13 63 chr2 64448938 64449017 -188807566 + (TA)n Simple_repeat Simple_repeat 1 75 0 635 237 7 14 chr2 64449138 64449277 -188807306 - AluJb SINE Alu -168 144 7 219 146 0 0 chr2 64449432 64449473 -188807110 + (GGA)n Simple_repeat Simple_repeat 2 42 0 747 221 155 99 chr2 64449535 64449910 -188806673 + L1M3 LINE L1 16 411 -5973 1444 140 27 122 chr2 64450049 64450377 -188806206 - AluYb8 SINE Alu -13 305 9 3185 192 83 9 chr2 64450381 64451167 -188805416 + L1M3 LINE L1 905 1748 -4636 201 309 89 41 chr2 64451663 64451786 -188804797 + L2 LINE L2 3139 3267 -5 1891 199 84 35 chr2 64451874 64452260 -188804323 + L1M3 LINE L1 1736 2102 -4280 246 32 0 0 chr2 64452260 64452291 -188804292 + (CAA)n Simple_repeat Simple_repeat 3 33 0 1891 199 84 35 chr2 64452291 64452665 -188803918 + L1M3 LINE L1 2102 2624 -3758 * 2511 191 16 29 chr2 64452648 64452860 -188803723 + L1MB2 LINE L1 5584 5797 -374 1655 168 0 8 chr2 64452860 64453128 -188803455 + AluJb SINE Alu 1 266 -46 312 27 0 0 chr2 64453130 64453167 -188803416 + (CA)n Simple_repeat Simple_repeat 1 37 0 2511 191 16 29 chr2 64453167 64453501 -188803082 + L1MB2 LINE L1 5798 6126 -45 1272 238 88 56 chr2 64453569 64454270 -188802313 + L1M3 LINE L1 2696 3419 -2963 1159 208 64 28 chr2 64454284 64454534 -188802049 + AluJb SINE Alu 15 273 -39 2050 116 0 11 chr2 64454563 64454878 -188801705 + AluSx SINE Alu 1 312 0 286 295 104 5 chr2 64454892 64455085 -188801498 + L1M3 LINE L1 3417 3628 -2754 3623 238 58 15 chr2 64455086 64456308 -188800275 + L1M3 LINE L1 4175 5449 -933 * 5618 169 59 49 chr2 64456279 64456434 -188800149 + L1MA9 LINE L1 4099 4251 -2297 1944 116 7 7 chr2 64456434 64456710 -188799873 - AluSg SINE Alu -7 303 28 5618 169 59 49 chr2 64456710 64457320 -188799263 + L1MA9 LINE L1 4251 4854 -1694 1698 158 3 27 chr2 64457320 64457618 -188798965 - AluJb SINE Alu -21 291 1 5618 169 59 49 chr2 64457618 64457783 -188798800 + L1MA9 LINE L1 4854 5016 -1532 1565 182 0 38 chr2 64457783 64458074 -188798509 + AluJo SINE Alu 1 280 -32 5618 169 59 49 chr2 64458074 64458626 -188797957 + L1MA9 LINE L1 5016 5561 -987 225 0 0 0 chr2 64458626 64458651 -188797932 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 5618 169 59 49 chr2 64458651 64459551 -188797032 + L1MA9 LINE L1 5561 6536 -12 2565 168 51 26 chr2 64459572 64460020 -188796563 + L1M3 LINE L1 5431 5897 -519 1079 147 108 97 chr2 64460020 64460361 -188796222 - MER7A DNA MER2_type -3 343 1 2565 168 51 26 chr2 64460361 64460526 -188796057 + L1M3 LINE L1 5897 6057 -359 265 209 75 0 chr2 64460631 64460698 -188795885 + L1MB4 LINE L1 5780 5851 -329 245 254 0 0 chr2 64460699 64460770 -188795813 - L1MB4 LINE L1 -103 6077 6007 * 1369 186 11 72 chr2 64460766 64460890 -188795693 + L1MB4 LINE L1 5853 5983 -197 1376 181 58 14 chr2 64460890 64461167 -188795416 + AluJo SINE Alu 1 289 -23 1369 186 11 72 chr2 64461167 64461391 -188795192 + L1MB4 LINE L1 5983 6180 0 1937 152 3 7 chr2 64461442 64461732 -188794851 + AluSx SINE Alu 1 289 -23 207 0 0 0 chr2 64461744 64461767 -188794816 + (TAAA)n Simple_repeat Simple_repeat 4 26 0 969 127 8 0 chr2 64461767 64461901 -188794682 + AluSg SINE Alu 1 135 -175 478 228 99 6 chr2 64462155 64462317 -188794266 + HAL1b LINE L1 714 890 -458 1678 135 103 0 chr2 64462422 64462699 -188793884 - AluSg SINE Alu 0 305 3 1481 210 0 4 chr2 64463243 64463515 -188793068 + AluJb SINE Alu 1 271 -41 675 168 128 34 chr2 64463813 64463962 -188792621 + AluJo SINE Alu 127 289 -23 25 0 0 0 chr2 64464069 64464094 -188792489 + AT_rich Low_complexity Low_complexity 1 25 0 628 241 90 61 chr2 64464491 64464629 -188791954 - MER58A DNA MER1_type -2202 218 70 2185 107 0 3 chr2 64464629 64464927 -188791656 + AluSc SINE Alu 1 297 -12 628 241 90 61 chr2 64464927 64465000 -188791583 - MER58A DNA MER1_type -2350 70 1 523 216 84 0 chr2 64465434 64465624 -188790959 + L1MC4a LINE L1 5266 5471 -2337 375 290 155 50 chr2 64465675 64465840 -188790743 + L1MC4a LINE L1 5581 5727 -2081 2165 132 0 0 chr2 64465840 64466144 -188790439 + AluSg SINE Alu 1 304 -6 375 290 155 50 chr2 64466144 64466340 -188790243 + L1MC4a LINE L1 5727 5980 -1828 24 0 0 0 chr2 64466456 64466480 -188790103 + AT_rich Low_complexity Low_complexity 1 24 0 241 266 380 9 chr2 64466678 64466791 -188789792 + MIR SINE MIR 106 260 -2 1557 161 93 43 chr2 64467551 64467874 -188788709 + Tigger3(Golem) DNA MER2_type 1 339 -2690 290 216 0 0 chr2 64467861 64467912 -188788671 + Tigger3(Golem) DNA MER2_type 2180 2230 -799 * 3053 146 113 8 chr2 64467912 64468522 -188788061 + Tigger3(Golem) DNA MER2_type 2355 3028 -1 23 0 0 0 chr2 64468693 64468716 -188787867 + AT_rich Low_complexity Low_complexity 1 23 0 1239 208 83 15 chr2 64468929 64469193 -188787390 + AluJb SINE Alu 6 287 -25 501 229 94 0 chr2 64469282 64469531 -188787052 + L1MB7 LINE L1 1250 1548 -4836 797 243 124 48 chr2 64469535 64470157 -188786426 + L1MB7 LINE L1 2083 2767 -3615 527 213 0 0 chr2 64470158 64470252 -188786331 + MER82 DNA MER2_type 1 94 -559 249 242 19 161 chr2 64470316 64470350 -188786233 - MIR SINE MIR -111 151 114 2133 131 3 3 chr2 64470350 64470655 -188785928 + AluSx SINE Alu 1 305 -7 249 242 19 161 chr2 64470655 64470781 -188785802 - MIR SINE MIR -148 114 14 886 271 10 0 chr2 64470845 64471037 -188785546 - MER82 DNA MER2_type -16 637 444 670 213 17 70 chr2 64471068 64471093 -188785490 + L1MB7 LINE L1 2764 2789 -3593 1674 115 171 4 chr2 64471093 64471345 -188785238 - AluSx SINE Alu -8 294 1 670 213 17 70 chr2 64471345 64471549 -188785034 + L1MB7 LINE L1 2789 2981 -3401 * 3096 200 66 36 chr2 64471541 64471964 -188784619 + L1MB7 LINE L1 5530 5939 -481 2584 52 7 0 chr2 64471964 64472269 -188784314 + AluY SINE Alu 1 307 -4 3096 200 66 36 chr2 64472269 64472710 -188783873 + L1MB7 LINE L1 5939 6420 0 1891 148 20 3 chr2 64473112 64473416 -188783167 - AluSx SINE Alu -2 310 2 460 327 134 11 chr2 64473519 64473794 -188782789 + L3 LINE CR1 1081 1389 -188 1654 184 29 10 chr2 64473935 64474245 -188782338 + MLT1A1 LTR MaLR 50 365 0 1659 190 21 0 chr2 64474371 64474655 -188781928 + AluJb SINE Alu 1 290 -22 2099 121 6 10 chr2 64475098 64475411 -188781172 + AluSx SINE Alu 1 312 0 180 0 0 0 chr2 64475681 64475701 -188780882 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 1872 132 43 4 chr2 64475711 64475991 -188780592 + AluSx SINE Alu 1 291 -21 216 0 0 0 chr2 64475995 64476019 -188780564 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 441 326 28 44 chr2 64476026 64476207 -188780376 - Charlie8 DNA MER1_type -2128 289 112 258 289 115 0 chr2 64476938 64477042 -188779541 + L2 LINE L2 2020 2135 -1179 771 240 86 30 chr2 64477047 64477314 -188779269 + MLT1H LTR MaLR 9 290 -259 1970 23 0 0 chr2 64477480 64477695 -188778888 + SVA Other Other 1170 1384 -2 23 68 0 0 chr2 64477695 64477739 -188778844 + AT_rich Low_complexity Low_complexity 1 44 0 189 0 0 0 chr2 64477739 64477760 -188778823 + (CA)n Simple_repeat Simple_repeat 2 22 0 335 164 18 146 chr2 64477770 64477814 -188778769 + MLT1H LTR MaLR 454 477 -72 1841 162 10 3 chr2 64477814 64478110 -188778473 - AluJo SINE Alu -14 298 1 335 164 18 146 chr2 64478110 64478175 -188778408 + MLT1H LTR MaLR 477 549 0 523 302 196 47 chr2 64478175 64478896 -188777687 + L2 LINE L2 2132 2959 -355 441 243 203 52 chr2 64479233 64479484 -188777099 + L2 LINE L2 3021 3309 -4 23 54 0 0 chr2 64479667 64479704 -188776879 + AT_rich Low_complexity Low_complexity 1 37 0 2088 101 0 53 chr2 64479896 64480214 -188776369 + AluSg SINE Alu 1 301 -9 1773 154 3 22 chr2 64480861 64481173 -188775410 + AluSx SINE Alu 1 306 -6 549 257 133 89 chr2 64481217 64481874 -188774709 + L1M4 LINE L1 3996 4623 -1523 2478 53 33 3 chr2 64481874 64482173 -188774410 + AluY SINE Alu 1 308 -3 549 257 133 89 chr2 64482173 64482186 -188774397 + L1M4 LINE L1 4623 4634 -1512 2111 124 7 16 chr2 64482186 64482493 -188774090 + AluSx SINE Alu 1 304 -8 549 257 133 89 chr2 64482493 64482634 -188773949 + L1M4 LINE L1 4634 4844 -1302 356 176 22 116 chr2 64482675 64482773 -188773810 + AluJ/FLAM SINE Alu 20 99 -203 463 228 78 126 chr2 64482780 64482983 -188773600 + L1M4 LINE L1 4882 5093 -1075 2196 113 0 3 chr2 64482983 64483284 -188773299 + AluSc SINE Alu 1 300 -9 463 228 78 126 chr2 64483284 64483644 -188772939 + L1M4 LINE L1 5093 5417 -751 1932 145 0 13 chr2 64483653 64483957 -188772626 + AluSx SINE Alu 1 300 -12 309 264 11 11 chr2 64483975 64484066 -188772517 - L1MC4 LINE L1 -1339 6703 6613 191 189 19 0 chr2 64484066 64484119 -188772464 + (TA)n Simple_repeat Simple_repeat 1 54 0 2003 110 53 0 chr2 64484370 64484651 -188771932 + AluSg SINE Alu 1 296 -14 945 166 155 5 chr2 64484879 64485072 -188771511 + AluJb SINE Alu 88 309 -3 2509 27 41 0 chr2 64486030 64486325 -188770258 + AluY SINE Alu 1 307 -4 1662 118 42 11 chr2 64486325 64486586 -188769997 + AluSx SINE Alu 27 297 -15 2403 76 0 32 chr2 64486692 64487007 -188769576 - AluY SINE Alu -6 305 1 1307 177 3 93 chr2 64487119 64487429 -188769154 + AluJo SINE Alu 1 282 -30 242 303 165 0 chr2 64487644 64487753 -188768830 + MIR3 SINE MIR 45 171 -37 22 35 0 0 chr2 64488005 64488034 -188768549 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 64488694 64488715 -188767868 + AT_rich Low_complexity Low_complexity 1 21 0 364 104 0 160 chr2 64488816 64488855 -188767728 - MER50 LTR ERV1 -134 600 556 2384 67 3 19 chr2 64488855 64489167 -188767416 + AluY SINE Alu 1 307 -4 364 104 0 160 chr2 64489167 64489233 -188767350 - MER50 LTR ERV1 -178 556 512 606 276 30 74 chr2 64489506 64489810 -188766773 + MLT1H LTR MaLR 65 328 -221 2327 85 9 29 chr2 64490094 64490410 -188766173 + AluY SINE Alu 1 310 -1 23 0 0 0 chr2 64491324 64491347 -188765236 + AT_rich Low_complexity Low_complexity 1 23 0 186 43 0 0 chr2 64491790 64491813 -188764770 + (TC)n Simple_repeat Simple_repeat 1 23 0 29 47 0 0 chr2 64491828 64491871 -188764712 + AT_rich Low_complexity Low_complexity 1 43 0 2202 104 0 17 chr2 64491871 64492168 -188764415 + AluSq SINE Alu 1 292 -21 1217 182 121 26 chr2 64492252 64492516 -188764067 + AluJo SINE Alu 1 289 -23 1696 231 32 41 chr2 64492775 64492981 -188763602 + MLT1F1 LTR MaLR 100 306 -261 2206 132 0 3 chr2 64492981 64493291 -188763292 + AluSx SINE Alu 1 309 -3 1696 231 32 41 chr2 64493291 64493551 -188763032 + MLT1F1 LTR MaLR 306 562 -5 198 250 42 69 chr2 64493579 64493651 -188762932 + MIR3 SINE MIR 126 195 -13 1978 125 10 10 chr2 64493763 64494066 -188762517 + AluSx SINE Alu 1 303 -9 1838 159 10 0 chr2 64494092 64494382 -188762201 + AluSx SINE Alu 5 297 -15 510 81 0 0 chr2 64494415 64494477 -188762106 + Alu SINE Alu 2 63 -248 2254 118 0 0 chr2 64494581 64494886 -188761697 + AluSx SINE Alu 1 305 -7 25 75 0 0 chr2 64495064 64495117 -188761466 + AT_rich Low_complexity Low_complexity 1 53 0 3495 145 50 0 chr2 64495183 64495685 -188760898 - MER1A DNA MER1_type 0 527 1 517 324 138 52 chr2 64495798 64496267 -188760316 + HAL1 LINE L1 22 554 -1953 1629 188 14 0 chr2 64496267 64496554 -188760029 + AluJo SINE Alu 16 306 -6 517 324 138 52 chr2 64496554 64496676 -188759907 + HAL1 LINE L1 554 664 -1843 2297 109 3 3 chr2 64497055 64497368 -188759215 + AluSp SINE Alu 1 313 0 263 286 50 12 chr2 64497368 64497529 -188759054 + HAL1 LINE L1 882 1048 -1459 372 244 59 22 chr2 64497719 64497755 -188758828 + HAL1 LINE L1 1150 1183 -1324 1722 193 7 0 chr2 64497755 64498060 -188758523 + AluJo SINE Alu 1 307 -5 372 244 59 22 chr2 64498060 64498158 -188758425 + HAL1 LINE L1 1183 1289 -1218 2138 113 10 13 chr2 64498262 64498572 -188758011 + AluSc SINE Alu 1 309 0 729 114 35 9 chr2 64498576 64498690 -188757893 + AluJb SINE Alu 2 118 -194 894 143 0 14 chr2 64498690 64498837 -188757746 + AluSc SINE Alu 164 308 -1 726 124 35 0 chr2 64498845 64498958 -188757625 + AluJb SINE Alu 2 118 -194 923 105 0 40 chr2 64498958 64499110 -188757473 + AluSc SINE Alu 164 309 0 1828 110 45 32 chr2 64499121 64499429 -188757154 + AluSx SINE Alu 1 312 0 862 211 92 40 chr2 64499468 64499727 -188756856 + HAL1 LINE L1 1504 1783 -724 4055 100 86 15 chr2 64499727 64500319 -188756264 - MER51A LTR ERV1 0 634 1 862 211 92 40 chr2 64500319 64500362 -188756221 + HAL1 LINE L1 1783 1822 -685 390 263 218 24 chr2 64500447 64500782 -188755801 + HAL1 LINE L1 1979 2378 -129 21 36 0 0 chr2 64502823 64502851 -188753732 + AT_rich Low_complexity Low_complexity 1 28 0 2164 126 7 0 chr2 64502979 64503288 -188753295 - AluSx SINE Alu -1 311 1 2188 113 7 3 chr2 64503334 64503627 -188752956 - AluSx SINE Alu -18 294 1 242 309 99 52 chr2 64504235 64504436 -188752147 - MIR SINE MIR -14 248 33 768 105 73 32 chr2 64504436 64504560 -188752023 - FLAM_C SINE Alu -4 129 1 242 309 99 52 chr2 64504560 64504591 -188751992 - MIR SINE MIR -229 33 5 236 361 0 0 chr2 64504808 64504880 -188751703 + MIR SINE MIR 61 132 -76 487 183 160 63 chr2 64506292 64506467 -188750116 + LTR50 LTR ERVL 3 194 -601 237 264 250 14 chr2 64506486 64506626 -188749957 + LTR50 LTR ERVL 297 469 -326 216 0 0 0 chr2 64507020 64507044 -188749539 + (CA)n Simple_repeat Simple_repeat 2 25 0 342 291 128 0 chr2 64507075 64507192 -188749391 + HAL1 LINE L1 557 688 -1819 936 194 114 8 chr2 64507745 64507982 -188748601 + L1MB2 LINE L1 4014 4275 -1871 1447 157 0 96 chr2 64507982 64508294 -188748289 + AluJb SINE Alu 21 302 -10 1016 201 64 46 chr2 64508294 64508351 -188748232 + L1MB2 LINE L1 4274 4328 -1818 2009 98 18 11 chr2 64508351 64508636 -188747947 - AluSq SINE Alu -5 308 22 1016 201 64 46 chr2 64508636 64508906 -188747677 + L1MB2 LINE L1 4328 4607 -1539 1344 207 3 48 chr2 64508921 64509230 -188747353 + AluJo SINE Alu 15 309 -3 1000 185 15 15 chr2 64509231 64509426 -188747157 + L1MB2 LINE L1 5494 5688 -483 1203 157 45 27 chr2 64509434 64509657 -188746926 - MER7A DNA MER2_type -121 225 1 633 201 240 6 chr2 64509661 64509840 -188746743 + L1MB2 LINE L1 5908 6128 -43 766 137 0 26 chr2 64509853 64509970 -188746613 + FLAM_C SINE Alu 15 128 -15 1874 115 71 0 chr2 64510085 64510354 -188746229 - AluSg SINE Alu -22 288 1 10867 168 70 48 chr2 64510383 64512287 -188744296 + L1M1 LINE L1 15 1985 -5580 2338 60 35 3 chr2 64512287 64512572 -188744011 - AluY SINE Alu -17 294 1 10867 168 70 48 chr2 64512572 64513124 -188743459 + L1M1 LINE L1 1985 2524 -5041 2288 96 0 7 chr2 64513125 64513426 -188743157 + AluSq SINE Alu 1 299 -14 959 235 126 38 chr2 64513492 64514023 -188742560 + L1MC5 LINE L1 6957 7534 -427 32 0 0 0 chr2 64514260 64514292 -188742291 + AT_rich Low_complexity Low_complexity 1 32 0 976 208 42 60 chr2 64514296 64514410 -188742173 + AluJo SINE Alu 34 149 -163 2349 71 0 0 chr2 64514410 64514723 -188741860 + AluY SINE Alu 1 313 0 976 208 42 60 chr2 64514723 64514872 -188741711 + AluJo SINE Alu 149 293 -19 780 202 126 62 chr2 64514881 64515024 -188741559 + L1ME1 LINE L1 5779 5911 -255 1939 112 6 91 chr2 64515024 64515176 -188741407 + AluSx SINE Alu 1 112 -200 2569 58 0 6 chr2 64515176 64515489 -188741094 + AluY SINE Alu 1 311 0 1939 112 6 91 chr2 64515489 64515666 -188740917 + AluSx SINE Alu 112 302 -10 780 202 126 62 chr2 64515666 64515879 -188740704 + L1ME1 LINE L1 5911 6158 -8 1247 158 65 20 chr2 64516015 64516262 -188740321 + AluJo SINE Alu 39 296 -16 231 88 0 0 chr2 64516264 64516298 -188740285 + (AAATG)n Simple_repeat Simple_repeat 3 36 0 1174 160 22 135 chr2 64516316 64516471 -188740112 + L1MA5 LINE L1 5978 6149 -151 1585 203 0 13 chr2 64516471 64516771 -188739812 - AluJo SINE Alu -16 296 1 1174 160 22 135 chr2 64516771 64516818 -188739765 + L1MA5 LINE L1 6149 6200 -100 1832 114 18 11 chr2 64516818 64517131 -188739452 + AluSq SINE Alu 1 315 0 1174 160 22 135 chr2 64517131 64517288 -188739295 + L1MA5 LINE L1 6200 6298 -2 996 175 120 134 chr2 64517303 64517457 -188739126 + AluJo SINE Alu 1 151 -151 1511 193 0 11 chr2 64517457 64517726 -188738857 + AluJb SINE Alu 22 287 -25 996 175 120 134 chr2 64517726 64517862 -188738721 + AluJo SINE Alu 151 287 -15 431 231 51 58 chr2 64517888 64518044 -188738539 + L1MC5 LINE L1 7721 7875 -86 4218 209 50 25 chr2 64518278 64518596 -188737987 + L1M2c LINE L1 82 391 -6458 2198 122 3 0 chr2 64518596 64518900 -188737683 + AluSx SINE Alu 1 305 -7 4218 209 50 25 chr2 64518900 64520265 -188736318 + L1M2c LINE L1 391 1903 -4946 1885 177 3 16 chr2 64520265 64520581 -188736002 + AluJo SINE Alu 1 312 0 1114 225 22 59 chr2 64520582 64520995 -188735588 + L1M2c LINE L1 2333 2868 -3982 2146 118 3 0 chr2 64520995 64521282 -188735301 + AluSx SINE Alu 1 288 -24 1114 225 22 59 chr2 64521282 64521375 -188735208 + L1M2c LINE L1 2868 2963 -3887 1029 187 56 10 chr2 64521381 64521579 -188735004 + AluSg/x SINE Alu 87 293 -19 4924 191 44 12 chr2 64521579 64522741 -188733842 + L1M2c LINE L1 2959 4157 -2691 1236 104 0 0 chr2 64522741 64522895 -188733688 + AluSg SINE Alu 2 155 -155 272 281 49 70 chr2 64522895 64523080 -188733503 - L2 LINE L2 -433 2881 2701 378 271 11 77 chr2 64523193 64523447 -188733136 - L2 LINE L2 -787 2527 2225 1591 207 7 3 chr2 64523447 64523756 -188732827 - AluJo SINE Alu -2 310 1 378 271 11 77 chr2 64523756 64523805 -188732778 - L2 LINE L2 -1089 2225 2174 189 0 0 0 chr2 64524654 64524675 -188731908 + (T)n Simple_repeat Simple_repeat 1 21 0 965 107 8 0 chr2 64524675 64524806 -188731777 - AluY SINE Alu -179 132 1 2407 84 0 0 chr2 64525749 64526047 -188730536 + AluY SINE Alu 1 298 -13 2057 110 3 10 chr2 64526266 64526565 -188730018 - AluSg SINE Alu -11 299 3 1784 115 63 28 chr2 64526796 64527083 -188729500 - AluSg SINE Alu -13 297 1 236 250 8 26 chr2 64527520 64527793 -188728790 + CT-rich Low_complexity Low_complexity 1 267 0 1340 198 37 11 chr2 64527797 64528065 -188728518 - AluJb SINE Alu -37 275 1 1923 141 0 23 chr2 64528076 64528239 -188728344 - AluSx SINE Alu -20 292 138 2134 130 0 3 chr2 64528239 64528538 -188728045 - AluSc SINE Alu -11 298 1 1923 141 0 23 chr2 64528538 64528673 -188727910 - AluSx SINE Alu -174 138 1 2157 140 0 0 chr2 64528696 64528996 -188727587 - AluSx SINE Alu -12 300 1 546 229 86 0 chr2 64529200 64529340 -188727243 - L1MB7 LINE L1 -11 6173 6022 2462 74 0 0 chr2 64529369 64529665 -188726918 + AluY SINE Alu 1 296 -15 555 262 93 8 chr2 64529674 64529910 -188726673 - L1MB7 LINE L1 -380 5790 5519 1758 123 42 0 chr2 64530087 64530347 -188726236 - AluSx SINE Alu -15 297 27 2290 75 41 0 chr2 64530347 64530639 -188725944 - AluY SINE Alu -5 306 1 352 261 85 69 chr2 64530938 64531126 -188725457 - MLT1H1 LTR MaLR -256 299 109 340 284 9 9 chr2 64531119 64531228 -188725355 - MLT1H LTR MaLR -376 173 65 * 363 104 0 160 chr2 64531501 64531567 -188725016 + MER50 LTR ERV1 512 556 -178 2475 67 0 19 chr2 64531567 64531883 -188724700 - AluY SINE Alu -1 310 1 363 104 0 160 chr2 64531883 64531922 -188724661 + MER50 LTR ERV1 556 600 -134 21 0 0 0 chr2 64532023 64532044 -188724539 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 64532704 64532733 -188723850 + AT_rich Low_complexity Low_complexity 1 29 0 206 303 165 0 chr2 64532985 64533094 -188723489 - MIR3 SINE MIR -37 171 45 804 185 19 12 chr2 64533432 64533594 -188722989 - FRAM SINE Alu -14 162 1 851 207 32 0 chr2 64533930 64534118 -188722465 + AluJb SINE Alu 119 312 0 5908 144 28 31 chr2 64534148 64535185 -188721398 + L1MA5A LINE L1 4729 5772 -525 405 0 0 0 chr2 64535185 64535230 -188721353 + (CA)n Simple_repeat Simple_repeat 2 46 0 5908 144 28 31 chr2 64535230 64535753 -188720830 + L1MA5A LINE L1 5772 6295 -2 2570 173 41 8 chr2 64535791 64536278 -188720305 + L1MC1 LINE L1 5814 6316 -17 1172 180 113 49 chr2 64536286 64536570 -188720013 + AluJo SINE Alu 1 302 0 302 281 70 53 chr2 64536590 64536761 -188719822 + L1MEd LINE L1 1178 1351 -5021 283 288 120 16 chr2 64536761 64536945 -188719638 + L1MEd LINE L1 1272 1474 -4910 1657 129 19 11 chr2 64536957 64537220 -188719363 + LTR9B LTR ERV1 296 560 -84 252 0 0 0 chr2 64537521 64537549 -188719034 + (A)n Simple_repeat Simple_repeat 1 28 0 2456 67 3 0 chr2 64537553 64537850 -188718733 + AluY SINE Alu 1 298 -13 1914 116 46 14 chr2 64537974 64538258 -188718325 + AluSg SINE Alu 1 293 -17 1108 114 19 6 chr2 64538275 64538433 -188718150 + AluSg/x SINE Alu 143 302 -8 3463 217 97 49 chr2 64538491 64538812 -188717771 - Charlie1a DNA MER1_type -1522 1239 935 2169 138 0 0 chr2 64538812 64539110 -188717473 + AluSx SINE Alu 1 298 -14 3463 217 97 49 chr2 64539110 64539269 -188717314 - Charlie1a DNA MER1_type -1826 935 785 2166 120 7 7 chr2 64539269 64539578 -188717005 + AluSx SINE Alu 1 309 -3 3463 217 97 49 chr2 64539578 64540004 -188716579 - Charlie1a DNA MER1_type -1976 785 381 2170 115 7 0 chr2 64540004 64540299 -188716284 - AluSx SINE Alu -3 309 13 3463 217 97 49 chr2 64540299 64540487 -188716096 - Charlie1a DNA MER1_type -2380 381 204 1177 207 93 21 chr2 64540487 64540767 -188715816 + AluJo SINE Alu 1 300 -2 3463 217 97 49 chr2 64540767 64540851 -188715732 - Charlie1a DNA MER1_type -2557 204 1 725 223 116 9 chr2 64540891 64541124 -188715459 + L1MB8 LINE L1 4159 4416 -1730 1997 111 4 11 chr2 64541168 64541438 -188715145 + AluSp SINE Alu 1 268 -45 369 182 30 0 chr2 64541489 64541555 -188715028 + AluS SINE Alu 229 296 -6 1880 237 10 24 chr2 64541558 64542065 -188714518 + L1MB8 LINE L1 4456 4955 -1191 2278 105 3 0 chr2 64542070 64542375 -188714208 + AluSg SINE Alu 1 306 -4 981 194 39 36 chr2 64542386 64542665 -188713918 + L1MB8 LINE L1 5811 6090 -88 345 118 176 0 chr2 64542699 64542767 -188713816 - MADE1 DNA Mariner 0 80 1 623 126 0 0 chr2 64542802 64542889 -188713694 + AluSq/x SINE Alu 40 126 -186 336 290 99 36 chr2 64542935 64543156 -188713427 + L1ME3A LINE L1 4378 4612 -1534 2320 112 0 10 chr2 64543223 64543536 -188713047 + AluSg SINE Alu 1 310 0 2216 112 10 0 chr2 64543690 64543995 -188712588 + AluSp SINE Alu 2 309 -4 2369 46 14 0 chr2 64544180 64544463 -188712120 + AluY SINE Alu 1 287 -24 186 43 0 0 chr2 64544466 64544489 -188712094 + (TA)n Simple_repeat Simple_repeat 1 23 0 478 251 99 114 chr2 64544498 64545075 -188711508 + L1ME3A LINE L1 5603 6170 0 2249 111 0 0 chr2 64546516 64546813 -188709770 + AluSc SINE Alu 1 297 -12 959 142 0 0 chr2 64546865 64547006 -188709577 + AluJb SINE Alu 1 141 -171 25 31 0 0 chr2 64547658 64547690 -188708893 + AT_rich Low_complexity Low_complexity 1 32 0 767 176 136 45 chr2 64547836 64548035 -188708548 + AluJb SINE Alu 86 302 -10 2039 111 0 27 chr2 64548035 64548332 -188708251 + AluSx SINE Alu 1 289 -23 277 303 33 40 chr2 64548700 64548852 -188707731 - MIR SINE MIR 0 262 112 2223 99 0 0 chr2 64548861 64549189 -188707394 + AluSx SINE Alu 12 339 0 4435 180 28 36 chr2 64549189 64549703 -188706880 + L1 LINE L1 3450 3954 -2192 2179 90 47 3 chr2 64549703 64550003 -188706580 + AluSq SINE Alu 1 313 0 4435 180 28 36 chr2 64550003 64550495 -188706088 + L1 LINE L1 3954 4448 -1698 883 143 0 0 chr2 64550501 64550627 -188705956 + AluJb SINE Alu 1 126 -186 196 239 92 46 chr2 64550818 64550927 -188705656 + L2 LINE L2 3138 3251 -21 2281 101 3 0 chr2 64551890 64552188 -188704395 - AluSq SINE Alu -14 299 1 459 253 99 114 chr2 64552381 64552958 -188703625 - L1ME3A LINE L1 0 6170 5603 24 24 0 24 chr2 64552970 64552985 -188703598 + AT_rich Low_complexity Low_complexity 1 15 -26 2286 101 0 0 chr2 64552985 64553272 -188703311 - AluY SINE Alu -20 291 5 24 24 0 24 chr2 64553272 64553298 -188703285 + AT_rich Low_complexity Low_complexity 15 41 0 295 227 128 43 chr2 64553323 64553494 -188703089 - L1ME3A LINE L1 -546 5616 5427 1221 213 88 4 chr2 64553494 64553767 -188702816 - AluJb SINE Alu -16 296 1 295 227 128 43 chr2 64553767 64553780 -188702803 - L1ME3A LINE L1 -735 5427 5417 2097 108 23 20 chr2 64553999 64554305 -188702278 - AluSx SINE Alu -5 307 1 1089 178 33 89 chr2 64554305 64554609 -188701974 + AluJb SINE Alu 24 310 -2 261 250 143 0 chr2 64554686 64554798 -188701785 + L1ME LINE L1 5476 5603 -518 1884 162 0 10 chr2 64554810 64555107 -188701476 + AluJb SINE Alu 1 294 -18 2204 124 0 16 chr2 64555109 64555424 -188701159 + AluSx SINE Alu 1 310 -2 234 158 0 0 chr2 64555590 64555628 -188700955 - Alu SINE Alu -173 130 93 1883 124 51 4 chr2 64555830 64556105 -188700478 - AluSx SINE Alu -24 288 1 226 0 29 29 chr2 64556108 64556143 -188700440 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 1940 135 7 0 chr2 64556239 64556528 -188700055 - AluSx SINE Alu -20 292 2 1937 137 6 29 chr2 64556544 64556859 -188699724 - AluSx SINE Alu 0 312 5 1918 139 4 0 chr2 64556864 64557138 -188699445 - AluSx SINE Alu -16 296 22 491 233 25 25 chr2 64557174 64557294 -188699289 + FLAM_C SINE Alu 2 121 -12 575 318 23 5 chr2 64557455 64557675 -188698908 - MIR SINE MIR -32 230 7 917 144 0 0 chr2 64558217 64558349 -188698234 + AluJb SINE Alu 2 133 -179 1642 133 3 92 chr2 64558352 64558668 -188697915 + AluJo SINE Alu 1 288 -24 1847 147 4 0 chr2 64558689 64558954 -188697629 + AluJb SINE Alu 15 280 -32 1470 184 59 4 chr2 64559268 64559539 -188697044 + AluJb SINE Alu 7 292 -20 2396 84 7 0 chr2 64559960 64560258 -188696325 + AluSq SINE Alu 1 300 -13 204 289 0 0 chr2 64560284 64560336 -188696247 + GA-rich Low_complexity Low_complexity 2 53 0 * 206 238 0 0 chr2 64560298 64560340 -188696243 + A-rich Low_complexity Low_complexity 12 53 0 2071 141 0 0 chr2 64560467 64560766 -188695817 + AluSg SINE Alu 1 299 -11 29 0 0 0 chr2 64560858 64560887 -188695696 + AT_rich Low_complexity Low_complexity 1 29 0 296 348 0 0 chr2 64560904 64560996 -188695587 + MIR SINE MIR 23 114 -94 2092 95 42 7 chr2 64561174 64561459 -188695124 + AluSx SINE Alu 1 295 -17 2153 110 0 10 chr2 64561459 64561751 -188694832 + AluY SINE Alu 1 289 -22 2291 161 90 7 chr2 64561829 64562240 -188694343 + Tigger7 DNA MER2_type 1 445 -2042 518 218 20 0 chr2 64562221 64562322 -188694261 + Tigger7 DNA MER2_type 2385 2487 0 * 2213 119 3 0 chr2 64562384 64562686 -188693897 + AluSc SINE Alu 1 303 -6 2186 115 0 7 chr2 64562790 64563094 -188693489 + AluSq SINE Alu 1 302 -11 788 163 0 23 chr2 64563209 64563338 -188693245 - FLAM_A SINE Alu -7 126 1 487 266 90 11 chr2 64563412 64563589 -188692994 + L1ME LINE L1 5548 5738 -383 23 0 0 0 chr2 64563590 64563613 -188692970 + AT_rich Low_complexity Low_complexity 1 23 0 2058 140 0 7 chr2 64563639 64563946 -188692637 + AluSg SINE Alu 1 305 -5 2089 141 0 0 chr2 64563948 64564247 -188692336 + AluSx SINE Alu 1 299 -13 1842 161 0 7 chr2 64564261 64564560 -188692023 + AluSx SINE Alu 3 299 -13 752 254 6 12 chr2 64564563 64564728 -188691855 + AluJo/FRAM SINE Alu 136 299 -13 696 162 59 15 chr2 64564891 64565027 -188691556 + FRAM SINE Alu 29 170 -6 2066 138 0 0 chr2 64565233 64565530 -188691053 + AluSq SINE Alu 1 297 -16 370 267 118 43 chr2 64565543 64565730 -188690853 + MIR SINE MIR 48 248 -14 1624 161 0 0 chr2 64565750 64566005 -188690578 + AluSx SINE Alu 33 287 -25 812 39 0 10 chr2 64566320 64566422 -188690161 + AluSg/x SINE Alu 203 303 -7 769 176 8 0 chr2 64567243 64567374 -188689209 + AluJo/FLAM SINE Alu 2 133 -179 2464 84 0 0 chr2 64567377 64567687 -188688896 + AluY SINE Alu 1 310 -1 1538 106 76 60 chr2 64567700 64567824 -188688759 + L1MA5A LINE L1 5986 6106 -191 2009 148 0 0 chr2 64567824 64568114 -188688469 + AluSq SINE Alu 1 290 -23 1538 106 76 60 chr2 64568114 64568291 -188688292 + L1MA5A LINE L1 6106 6292 -5 1880 142 35 0 chr2 64568311 64568600 -188687983 + AluSx SINE Alu 1 299 -13 2079 115 14 3 chr2 64568705 64569001 -188687582 + AluSg SINE Alu 1 299 -11 593 187 0 0 chr2 64569021 64569128 -188687455 - FLAM_A SINE Alu -35 107 1 2219 92 0 10 chr2 64569293 64569586 -188686997 - AluSg SINE Alu -6 304 15 2246 87 11 0 chr2 64569876 64570162 -188686421 - AluSp SINE Alu -24 289 1 2239 102 7 0 chr2 64570606 64570900 -188685683 + AluSq SINE Alu 1 296 -17 29 108 0 0 chr2 64572143 64572263 -188684320 + GC_rich Low_complexity Low_complexity 1 120 0 28 0 0 0 chr2 64572459 64572487 -188684096 + GC_rich Low_complexity Low_complexity 1 28 0 1574 102 9 5 chr2 64572588 64572835 -188683748 + AluSq SINE Alu 68 315 0 835 155 45 0 chr2 64572837 64572992 -188683591 + L1MA5 LINE L1 6137 6298 -2 870 179 120 134 chr2 64573007 64573161 -188683422 + AluJo SINE Alu 1 151 -151 1528 193 0 11 chr2 64573161 64573430 -188683153 + AluJb SINE Alu 22 287 -25 870 179 120 134 chr2 64573430 64573566 -188683017 + AluJo SINE Alu 151 287 -15 422 231 51 58 chr2 64573592 64573748 -188682835 + L1MC5 LINE L1 7721 7875 -86 5090 222 50 21 chr2 64573982 64574300 -188682283 + L1M2c LINE L1 799 1106 -6460 2243 121 0 0 chr2 64574300 64574605 -188681978 + AluSx SINE Alu 1 305 -7 5090 222 50 21 chr2 64574605 64575970 -188680613 + L1M2c LINE L1 1106 2620 -4946 1848 180 3 16 chr2 64575970 64576281 -188680302 + AluJo SINE Alu 1 307 -5 1144 210 27 42 chr2 64576282 64576695 -188679888 + L1M2c LINE L1 2727 3145 -4422 2146 118 3 0 chr2 64576695 64576982 -188679601 + AluSx SINE Alu 1 288 -24 1144 210 27 42 chr2 64576982 64577075 -188679508 + L1M2c LINE L1 3145 3680 -3887 1039 187 56 10 chr2 64577081 64577279 -188679304 + AluSg/x SINE Alu 87 293 -19 9435 182 37 27 chr2 64577279 64578441 -188678142 + L1M2c LINE L1 3676 4825 -2740 2193 99 0 0 chr2 64578441 64578766 -188677817 + AluY SINE Alu 2 326 0 9435 182 37 27 chr2 64578766 64579278 -188677305 + L1M2c LINE L1 4825 5330 -2235 2224 90 43 3 chr2 64579278 64579579 -188677004 + AluSq SINE Alu 1 313 0 9435 182 37 27 chr2 64579579 64580072 -188676511 + L1M2c LINE L1 5330 5867 -1698 883 143 0 0 chr2 64580078 64580204 -188676379 + AluJb SINE Alu 1 126 -186 196 239 92 46 chr2 64580395 64580504 -188676079 + L2 LINE L2 3138 3251 -21 2218 101 7 3 chr2 64581467 64581765 -188674818 - AluSq SINE Alu -14 299 1 845 103 0 44 chr2 64581765 64581901 -188674682 + Tigger5 DNA MER2_type 2108 2237 -86 2149 123 3 3 chr2 64581901 64582209 -188674374 - AluSq SINE Alu -5 308 1 180 0 0 0 chr2 64582500 64582520 -188674063 + (GA)n Simple_repeat Simple_repeat 2 21 0 231 381 0 0 chr2 64582810 64582978 -188673605 + C-rich Low_complexity Low_complexity 1 168 0 1586 157 52 17 chr2 64584101 64584388 -188672195 - AluJo SINE Alu -9 303 7 2161 95 27 0 chr2 64584546 64584842 -188671741 + AluSp SINE Alu 1 304 -9 2446 87 0 0 chr2 64584842 64585141 -188671442 + AluY SINE Alu 1 299 -12 1559 212 7 0 chr2 64585145 64585437 -188671146 + AluJo SINE Alu 3 296 -16 2101 98 7 20 chr2 64585650 64585946 -188670637 + AluSq SINE Alu 1 292 -21 1774 131 28 7 chr2 64586045 64586180 -188670403 + AluSx SINE Alu 1 132 -180 2119 123 3 0 chr2 64586180 64586473 -188670110 + AluSg SINE Alu 1 294 -16 1774 131 28 7 chr2 64586473 64586619 -188669964 + AluSx SINE Alu 132 288 -24 2191 83 23 3 chr2 64586698 64586999 -188669584 - AluSp SINE Alu -6 307 1 1959 150 7 10 chr2 64587174 64587481 -188669102 - AluSx SINE Alu -6 306 1 595 156 73 0 chr2 64587485 64587594 -188668989 - FLAM_C SINE Alu -12 121 5 572 191 20 41 chr2 64587595 64587742 -188668841 - AluJo/FRAM SINE Alu -33 279 136 384 200 0 0 chr2 64587742 64587807 -188668776 - FRAM/FAM SINE Alu -100 66 2 233 207 197 78 chr2 64587891 64588030 -188668553 - HAL1 LINE L1 -1231 1276 1155 2316 65 17 3 chr2 64588030 64588323 -188668260 - AluY SINE Alu -11 300 4 233 207 197 78 chr2 64588323 64588492 -188668091 - HAL1 LINE L1 -1352 1155 931 247 200 22 0 chr2 64588516 64588561 -188668022 - HAL1 LINE L1 -1625 882 837 1712 176 11 4 chr2 64588596 64588874 -188667709 + AluSx SINE Alu 1 280 -32 1640 169 29 4 chr2 64588920 64589193 -188667390 - AluSx SINE Alu -30 282 3 619 215 8 0 chr2 64589956 64590077 -188666506 - FLAM_C SINE Alu -11 122 1 2075 127 33 3 chr2 64590127 64590427 -188666156 - AluSx SINE Alu -3 309 1 1881 123 9 66 chr2 64590427 64590600 -188665983 - AluSx SINE Alu -12 300 152 2564 51 0 0 chr2 64590600 64590893 -188665690 - AluY SINE Alu -17 294 2 1881 123 9 66 chr2 64590893 64591037 -188665546 - AluSx SINE Alu -160 152 1 771 189 7 7 chr2 64591072 64591220 -188665363 + AluSg/x SINE Alu 138 285 -25 22 0 0 0 chr2 64591949 64591971 -188664612 + AT_rich Low_complexity Low_complexity 1 22 0 1244 201 74 21 chr2 64592180 64592463 -188664120 - AluJo SINE Alu -14 298 1 992 176 0 0 chr2 64592563 64592728 -188663855 - AluSg/x SINE Alu -13 299 135 1894 139 24 0 chr2 64592729 64593024 -188663559 - AluSx SINE Alu -10 302 1 216 0 0 0 chr2 64593261 64593285 -188663298 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 2175 110 3 7 chr2 64593310 64593611 -188662972 + AluSx SINE Alu 1 300 -12 1154 129 0 0 chr2 64593623 64593786 -188662797 + AluSg/x SINE Alu 137 299 -13 264 132 0 0 chr2 64593819 64593887 -188662696 + Alu SINE Alu 244 311 0 2183 90 10 55 chr2 64594118 64594430 -188662153 + AluSx SINE Alu 1 298 -14 1211 237 14 14 chr2 64594468 64594755 -188661828 + AluJo SINE Alu 7 293 -19 1812 132 0 66 chr2 64594766 64595069 -188661514 + AluSx SINE Alu 1 283 -29 851 136 17 0 chr2 64595252 64595370 -188661213 + AluSq/x SINE Alu 1 120 -193 779 206 45 89 chr2 64596123 64596186 -188660397 + MER46A DNA MER2_type 1 65 -2666 2067 114 0 14 chr2 64596186 64596475 -188660108 - AluSq SINE Alu -28 285 1 779 206 45 89 chr2 64596475 64596526 -188660057 + MER46A DNA MER2_type 65 117 -2614 1960 136 41 0 chr2 64596526 64596821 -188659762 + AluSp SINE Alu 1 307 -6 779 206 45 89 chr2 64596821 64596952 -188659631 + MER46A DNA MER2_type 117 236 0 1805 141 20 17 chr2 64597168 64597466 -188659117 + AluSx SINE Alu 1 299 -13 1774 168 7 7 chr2 64597826 64598130 -188658453 + AluJo SINE Alu 1 304 -8 2148 107 0 10 chr2 64598308 64598597 -188657986 - AluSp SINE Alu -27 286 1 1166 188 82 20 chr2 64598614 64598869 -188657714 - AluJo SINE Alu -41 271 1 2155 113 3 34 chr2 64598918 64599238 -188657345 - AluSx SINE Alu -1 311 2 456 241 70 19 chr2 64599773 64599931 -188656652 + L1ME LINE L1 4549 4714 -1432 1414 127 180 0 chr2 64599932 64600176 -188656407 + AluSx SINE Alu 2 289 -13 249 196 18 0 chr2 64600179 64600235 -188656348 + L1ME LINE L1 4948 5004 -1142 942 140 29 41 chr2 64600241 64600412 -188656171 - AluJb SINE Alu -24 288 120 344 158 35 0 chr2 64600412 64600469 -188656114 - AluS SINE Alu -242 59 1 846 214 76 95 chr2 64600471 64600534 -188656049 + L1ME LINE L1 4999 5062 -1100 1508 138 153 8 chr2 64600534 64600795 -188655788 - AluSg1 SINE Alu -10 299 1 846 214 76 95 chr2 64600795 64601070 -188655513 + L1ME LINE L1 5062 5341 -821 2024 116 0 23 chr2 64601070 64601371 -188655212 + AluSg SINE Alu 1 294 -16 846 214 76 95 chr2 64601371 64601481 -188655102 + L1ME LINE L1 5341 5452 -710 2363 100 0 7 chr2 64601481 64601790 -188654793 + AluSg SINE Alu 1 307 -3 846 214 76 95 chr2 64601790 64601963 -188654620 + L1ME LINE L1 5452 5613 -549 1808 152 27 10 chr2 64601963 64602259 -188654324 + AluSx SINE Alu 1 301 -11 846 214 76 95 chr2 64602259 64602287 -188654296 + L1ME LINE L1 5613 5640 -522 252 254 0 28 chr2 64602354 64602425 -188654158 + L1ME1 LINE L1 6054 6122 -44 2185 82 0 27 chr2 64602972 64603108 -188653475 + AluY SINE Alu 1 139 -172 324 0 0 0 chr2 64603108 64603144 -188653439 + (CA)n Simple_repeat Simple_repeat 1 36 0 2185 82 0 27 chr2 64603144 64603300 -188653283 + AluY SINE Alu 139 285 -26 1709 122 59 21 chr2 64604790 64605076 -188651507 + AluSx SINE Alu 3 299 -13 511 132 0 55 chr2 64605107 64605198 -188651385 + L1MA3 LINE L1 6215 6300 -5 1341 157 18 5 chr2 64605248 64605465 -188651118 - AluSx SINE Alu -90 222 3 2138 130 0 0 chr2 64605469 64605769 -188650814 - AluSx SINE Alu -12 300 1 2116 123 3 7 chr2 64605884 64606185 -188650398 - AluSp SINE Alu -13 300 1 741 172 0 0 chr2 64606915 64607037 -188649546 - AluSc SINE Alu -16 293 172 1941 105 53 36 chr2 64607042 64607346 -188649237 - AluSp SINE Alu -4 309 1 2094 117 7 3 chr2 64607346 64607636 -188648947 - AluSg1 SINE Alu -18 291 1 1721 178 23 13 chr2 64607637 64607946 -188648637 - AluJo SINE Alu 0 312 1 1834 129 6 65 chr2 64608199 64608524 -188648059 - AluSg SINE Alu -4 306 1 1202 119 8 142 chr2 64608902 64609162 -188647421 + L1PB2 LINE L1 5927 6151 0 2042 107 30 17 chr2 64610070 64610237 -188646346 - AluSx SINE Alu -10 302 128 2207 64 46 4 chr2 64610237 64610517 -188646066 - AluY SINE Alu -19 292 1 2042 107 30 17 chr2 64610517 64610647 -188645936 - AluSx SINE Alu -184 128 1 949 142 0 0 chr2 64610647 64610781 -188645802 - AluSp SINE Alu -179 134 1 1056 191 0 21 chr2 64611017 64611205 -188645378 - AluJo SINE Alu -59 253 70 889 164 46 0 chr2 64611787 64611939 -188644644 - AluSg/x SINE Alu -19 293 135 1957 80 4 8 chr2 64612065 64612315 -188644268 - AluY SINE Alu -19 292 44 422 287 66 0 chr2 64612409 64612531 -188644052 - FLAM_A SINE Alu -11 131 2 857 144 0 0 chr2 64612579 64612711 -188643872 - AluSp/q SINE Alu -8 305 174 501 79 0 0 chr2 64612711 64612774 -188643809 - AluS SINE Alu -243 70 8 2247 94 0 3 chr2 64614421 64614719 -188641864 + AluY SINE Alu 1 297 -14 2262 108 3 0 chr2 64614733 64615029 -188641554 + AluSp SINE Alu 1 297 -16 2219 95 3 3 chr2 64615246 64615540 -188641043 - AluY SINE Alu -17 294 1 2341 88 0 0 chr2 64615580 64615874 -188640709 - AluSc SINE Alu -15 294 1 2215 128 0 0 chr2 64615878 64616184 -188640399 - AluSx SINE Alu -6 306 1 1713 167 27 10 chr2 64616560 64616853 -188639730 + AluSx SINE Alu 3 300 -12 1888 101 40 14 chr2 64616864 64617142 -188639441 + AluSg SINE Alu 1 285 -25 345 24 0 0 chr2 64617142 64617184 -188639399 + (CA)n Simple_repeat Simple_repeat 2 43 0 180 0 0 0 chr2 64617186 64617206 -188639377 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 1576 181 23 33 chr2 64617301 64617605 -188638978 + AluJb SINE Alu 1 301 -11 426 293 0 23 chr2 64618838 64618971 -188637612 + AluJo SINE Alu 1 130 -182 973 198 17 0 chr2 64619027 64619199 -188637384 + AluJo SINE Alu 120 294 -18 303 300 83 8 chr2 64619287 64619407 -188637176 - MER5A DNA MER1_type -57 132 4 1671 200 35 25 chr2 64620047 64620442 -188636141 + L1MB5 LINE L1 5722 6120 -54 273 155 0 0 chr2 64620453 64620511 -188636072 + (TA)n Simple_repeat Simple_repeat 1 58 0 1707 155 4 7 chr2 64620529 64620800 -188635783 - AluSx SINE Alu -19 293 24 26 50 0 0 chr2 64620896 64620936 -188635647 + AT_rich Low_complexity Low_complexity 1 40 0 1593 184 27 7 chr2 64621355 64621649 -188634934 - AluJo SINE Alu -12 300 1 1357 229 10 14 chr2 64621892 64622189 -188634394 - AluJo SINE Alu -16 296 1 2140 100 17 3 chr2 64622900 64623191 -188633392 - AluSg SINE Alu -15 295 1 24 0 0 0 chr2 64623485 64623509 -188633074 + AT_rich Low_complexity Low_complexity 1 24 0 1288 123 26 0 chr2 64623791 64623986 -188632597 - AluSg/x SINE Alu -26 284 85 470 167 167 0 chr2 64624680 64624764 -188631819 + AluJ/FLAM SINE Alu 1 98 -214 862 239 6 0 chr2 64624947 64625106 -188631477 + AluSg/x SINE Alu 135 294 -16 594 155 0 21 chr2 64625882 64625979 -188630604 + AluSx SINE Alu 2 96 -216 2301 103 0 0 chr2 64625979 64626279 -188630304 + AluSg SINE Alu 1 300 -10 1502 128 0 0 chr2 64626278 64626497 -188630086 + AluSx SINE Alu 82 300 -12 * 2208 117 7 3 chr2 64627120 64627428 -188629155 + AluSx SINE Alu 1 309 -3 2053 103 21 10 chr2 64628148 64628439 -188628144 + AluSq SINE Alu 1 294 -19 204 179 0 0 chr2 64628491 64628530 -188628053 + A-rich Low_complexity Low_complexity 1 39 0 25 0 0 0 chr2 64628651 64628676 -188627907 + AT_rich Low_complexity Low_complexity 1 25 0 2248 72 14 3 chr2 64628676 64628966 -188627617 + AluY SINE Alu 4 296 -15 896 173 12 6 chr2 64628966 64629128 -188627455 - FRAM SINE Alu -14 162 1 853 195 32 11 chr2 64629467 64629657 -188626926 + AluJb SINE Alu 119 312 0 5972 142 29 31 chr2 64629686 64630723 -188625860 + L1MA5A LINE L1 4729 5775 -522 333 0 0 0 chr2 64630723 64630760 -188625823 + (CA)n Simple_repeat Simple_repeat 2 38 0 5972 142 29 31 chr2 64630760 64631281 -188625302 + L1MA5A LINE L1 5775 6295 -2 2732 172 41 8 chr2 64631317 64631805 -188624778 + L1MC1 LINE L1 5813 6316 -17 1270 180 113 49 chr2 64631813 64632097 -188624486 + AluJo SINE Alu 1 302 0 472 270 167 23 chr2 64632111 64632484 -188624099 + L1MDa LINE L1 1320 1724 -4816 1641 129 19 11 chr2 64632484 64632747 -188623836 + LTR9B LTR ERV1 296 560 -84 243 0 0 0 chr2 64633047 64633074 -188623509 + (A)n Simple_repeat Simple_repeat 1 27 0 2341 84 0 0 chr2 64633078 64633374 -188623209 + AluY SINE Alu 1 296 -15 299 382 16 21 chr2 64633389 64633575 -188623008 + L2 LINE L2 2490 2674 -640 923 164 0 0 chr2 64633601 64633747 -188622836 - AluJb SINE Alu -30 282 137 283 272 107 70 chr2 64634175 64634416 -188622167 - L2 LINE L2 -275 2997 2736 2150 111 10 3 chr2 64634417 64634724 -188621859 - AluSc SINE Alu 0 309 1 1795 150 14 14 chr2 64634731 64635017 -188621566 - AluJo SINE Alu -24 288 3 2387 82 3 0 chr2 64635311 64635614 -188620969 - AluY SINE Alu -7 304 1 2373 98 7 0 chr2 64635625 64635931 -188620652 - AluSp SINE Alu -5 308 1 388 330 8 0 chr2 64635957 64636075 -188620508 + L2 LINE L2 3193 3311 -2 1682 193 0 46 chr2 64636132 64636459 -188620124 + AluJb SINE Alu 1 312 0 701 122 0 0 chr2 64636462 64636552 -188620031 + AluS SINE Alu 2 91 -221 1512 160 4 16 chr2 64636553 64636644 -188619939 + AluSx SINE Alu 46 137 -175 2114 117 7 7 chr2 64636644 64636944 -188619639 + AluSx SINE Alu 1 300 -12 1512 160 4 16 chr2 64636944 64637102 -188619481 + AluSx SINE Alu 137 292 -20 21 82 0 0 chr2 64637199 64637248 -188619335 + AT_rich Low_complexity Low_complexity 1 49 0 200 311 27 14 chr2 64637332 64637406 -188619177 + L2 LINE L2 3196 3270 -2 234 275 87 0 chr2 64637610 64637679 -188618904 - MIR3 SINE MIR -132 76 2 2165 73 30 23 chr2 64639527 64639827 -188616756 - AluY SINE Alu -9 302 1 32 26 0 0 chr2 64640084 64640123 -188616460 + AT_rich Low_complexity Low_complexity 1 39 0 631 175 0 0 chr2 64640170 64640267 -188616316 + AluJ/FLAM SINE Alu 3 99 -213 1550 154 0 4 chr2 64640282 64640522 -188616061 + AluJb SINE Alu 73 311 -1 2206 97 0 47 chr2 64640528 64640674 -188615909 + AluSx SINE Alu 1 152 -160 2211 89 13 3 chr2 64640674 64640978 -188615605 + AluY SINE Alu 1 307 -4 2206 97 0 47 chr2 64640978 64641152 -188615431 + AluSx SINE Alu 152 306 -6 21 36 0 0 chr2 64641184 64641212 -188615371 + AT_rich Low_complexity Low_complexity 1 28 0 2127 80 20 3 chr2 64641271 64641572 -188615011 - AluY SINE Alu -5 306 1 180 0 0 0 chr2 64641670 64641690 -188614893 + (TC)n Simple_repeat Simple_repeat 2 21 0 2055 151 0 19 chr2 64641981 64642298 -188614285 + AluSx SINE Alu 1 311 -1 269 106 21 43 chr2 64642418 64642465 -188614118 - Tigger5 DNA MER2_type 0 2323 2278 1691 100 4 4 chr2 64642485 64642716 -188613867 - AluSg/x SINE Alu -15 297 67 535 75 88 25 chr2 64642828 64642908 -188613675 - AluJ/FLAM SINE Alu -221 91 7 277 253 0 10 chr2 64642939 64643038 -188613545 - L1MC4 LINE L1 -1337 6705 6608 2189 110 7 3 chr2 64643109 64643408 -188613175 + AluSx SINE Alu 1 300 -12 1842 139 0 36 chr2 64643428 64643566 -188613017 + AluJb SINE Alu 1 143 -169 2166 137 0 13 chr2 64643566 64643900 -188612683 + AluSx SINE Alu 1 312 0 1842 139 0 36 chr2 64643900 64644062 -188612521 + AluJb SINE Alu 143 290 -22 2186 113 7 0 chr2 64645416 64645709 -188610874 - AluSx SINE Alu -17 295 1 1857 98 26 65 chr2 64645998 64646304 -188610279 + AluSq SINE Alu 1 294 -19 840 57 228 0 chr2 64646321 64646444 -188610139 - AluY SINE Alu -4 307 157 5576 118 8 21 chr2 64646544 64647549 -188609034 - L1P3 LINE L1 -4531 1930 939 2187 138 0 0 chr2 64647551 64647856 -188608727 - AluSx SINE Alu -7 305 1 259 219 16 0 chr2 64647893 64647957 -188608626 - AluSp/q SINE Alu -7 296 232 2394 58 24 0 chr2 64647972 64648265 -188608318 - AluY SINE Alu -10 301 2 22 35 0 0 chr2 64648467 64648496 -188608087 + AT_rich Low_complexity Low_complexity 1 29 0 838 201 29 35 chr2 64648538 64648712 -188607871 - AluJo SINE Alu -11 301 129 414 99 0 37 chr2 64648712 64648793 -188607790 + (TTC)n Simple_repeat Simple_repeat 2 79 0 744 197 7 22 chr2 64648813 64648950 -188607633 - AluJo SINE Alu -166 146 12 407 241 121 35 chr2 64648962 64649136 -188607447 + L1MC4a LINE L1 5637 5825 -1983 2389 47 40 3 chr2 64649157 64649457 -188607126 + AluY SINE Alu 1 311 0 295 152 0 0 chr2 64649468 64649514 -188607069 + L1MC1 LINE L1 5199 5244 -902 5651 152 32 46 chr2 64649798 64649819 -188606764 + L1MC1 LINE L1 5222 5242 -1091 189 0 0 0 chr2 64649819 64649840 -188606743 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 5651 152 32 46 chr2 64649840 64650004 -188606579 + L1MC1 LINE L1 5242 5407 -926 1794 84 128 0 chr2 64650004 64650293 -188606290 + AluSg SINE Alu 1 321 0 5651 152 32 46 chr2 64650293 64650527 -188606056 + L1MC1 LINE L1 5407 5643 -690 180 77 0 0 chr2 64650527 64650553 -188606030 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 5651 152 32 46 chr2 64650553 64651014 -188605569 + L1MC1 LINE L1 5643 6081 -252 2195 125 0 13 chr2 64651014 64651325 -188605258 - AluSx SINE Alu -5 307 1 5651 152 32 46 chr2 64651325 64651568 -188605015 + L1MC1 LINE L1 6081 6326 -7 2069 137 13 0 chr2 64651568 64651868 -188604715 + AluSx SINE Alu 1 304 -8 1552 104 0 5 chr2 64651868 64652069 -188604514 + AluSg/x SINE Alu 80 280 -30 261 0 0 0 chr2 64652073 64652102 -188604481 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 1310 124 20 15 chr2 64652202 64652404 -188604179 - AluJb SINE Alu -25 287 85 23 68 0 0 chr2 64652404 64652448 -188604135 + AT_rich Low_complexity Low_complexity 1 44 0 2446 56 0 3 chr2 64652792 64653097 -188603486 - AluY SINE Alu -7 304 1 1721 127 27 33 chr2 64653123 64653422 -188603161 - AluJo SINE Alu -12 300 4 1042 139 23 5 chr2 64653936 64654202 -188602381 - AluJb SINE Alu 0 312 2 2169 102 3 53 chr2 64654266 64654446 -188602137 - AluSq SINE Alu -6 307 148 222 37 0 0 chr2 64654446 64654473 -188602110 + (TA)n Simple_repeat Simple_repeat 1 27 0 2169 102 3 53 chr2 64654473 64654615 -188601968 - AluSq SINE Alu -165 148 1 2012 125 0 4 chr2 64654684 64655032 -188601551 - AluSc SINE Alu 0 347 1 1861 137 0 54 chr2 64655034 64655347 -188601236 - AluSx SINE Alu -16 296 1 2461 77 0 0 chr2 64655360 64655660 -188600923 - AluSg SINE Alu -10 300 1 668 128 0 154 chr2 64655784 64655940 -188600643 - FLAM_C SINE Alu -10 133 2 1849 163 10 3 chr2 64655977 64656272 -188600311 + AluJb SINE Alu 2 298 -14 22 0 0 0 chr2 64656332 64656354 -188600229 + AT_rich Low_complexity Low_complexity 1 22 0 326 283 81 0 chr2 64656454 64656553 -188600030 + MIR3 SINE MIR 68 174 -34 565 204 171 20 chr2 64656949 64657101 -188599482 - MER5A DNA MER1_type -6 183 9 652 242 90 22 chr2 64657504 64657727 -188598856 + L1ME LINE L1 5325 5562 -608 2648 45 0 10 chr2 64657737 64658049 -188598534 - AluY SINE Alu -1 310 2 216 0 0 0 chr2 64658049 64658073 -188598510 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 1650 140 0 113 chr2 64658074 64658233 -188598350 - AluJb SINE Alu -20 292 187 2167 98 6 47 chr2 64658233 64658551 -188598032 - AluSp SINE Alu -8 305 1 1650 140 0 113 chr2 64658551 64658720 -188597863 - AluJb SINE Alu -125 187 1 379 148 0 0 chr2 64659025 64659086 -188597497 + Alu SINE Alu 242 302 0 855 69 0 0 chr2 64659333 64659434 -188597149 - AluY SINE Alu -210 101 1 227 234 94 0 chr2 64659434 64659498 -188597085 - MIR SINE MIR -47 215 146 242 186 23 0 chr2 64659501 64659544 -188597039 + L2 LINE L2 3264 3307 -6 291 252 122 9 chr2 64659548 64659655 -188596928 - MIR SINE MIR -115 147 29 1178 116 0 33 chr2 64659714 64659895 -188596688 - AluJo/FRAM SINE Alu -4 308 134 2325 109 3 0 chr2 64659895 64660197 -188596386 - AluSx SINE Alu -9 303 1 1803 116 8 8 chr2 64660374 64660633 -188595950 - AluSx SINE Alu -53 259 1 2276 122 0 0 chr2 64660635 64660946 -188595637 - AluSx SINE Alu -1 311 1 2121 119 0 0 chr2 64660953 64661266 -188595317 - AluSq SINE Alu 0 313 1 331 267 153 40 chr2 64661321 64661523 -188595060 + L2 LINE L2 3089 3313 0 1484 135 6 75 chr2 64661568 64661712 -188594871 + AluY SINE Alu 1 153 -158 360 64 0 0 chr2 64661712 64661759 -188594824 + (CA)n Simple_repeat Simple_repeat 2 48 0 1484 135 6 75 chr2 64661759 64661948 -188594635 + AluY SINE Alu 153 311 0 2183 101 31 0 chr2 64662256 64662544 -188594039 - AluSg SINE Alu -13 297 1 2050 101 20 20 chr2 64662713 64663019 -188593564 + AluY SINE Alu 1 306 -5 1362 182 37 30 chr2 64663670 64663967 -188592616 + AluJo SINE Alu 11 309 -3 1446 204 10 13 chr2 64665040 64665353 -188591230 - AluJo SINE Alu 0 312 1 1458 201 48 4 chr2 64665374 64665647 -188590936 - AluJo SINE Alu -22 290 6 22 0 0 0 chr2 64666750 64666772 -188589811 + AT_rich Low_complexity Low_complexity 1 22 0 1445 189 52 7 chr2 64667939 64668209 -188588374 + AluJo SINE Alu 1 282 -30 2308 103 0 3 chr2 64670002 64670303 -188586280 - AluSx SINE Alu -12 300 1 1372 201 0 60 chr2 64670483 64670801 -188585782 + AluJo SINE Alu 1 299 -13 2099 110 0 3 chr2 64671216 64671498 -188585085 - AluSg SINE Alu -6 304 24 1976 108 3 67 chr2 64671648 64671964 -188584619 + AluSg SINE Alu 1 296 -14 435 19 0 0 chr2 64672025 64672077 -188584506 + (TA)n Simple_repeat Simple_repeat 1 52 0 285 171 0 101 chr2 64672226 64672305 -188584278 + AluSp SINE Alu 109 169 -134 * 901 158 126 11 chr2 64672290 64672473 -188584110 + AluJb SINE Alu 70 273 -39 2136 107 0 19 chr2 64672675 64672985 -188583598 + AluSg SINE Alu 5 308 -2 25 0 0 0 chr2 64674127 64674152 -188582431 + AT_rich Low_complexity Low_complexity 1 25 0 202 222 0 44 chr2 64674205 64674250 -188582333 - L2 LINE L2 -20 3252 3210 2181 61 7 0 chr2 64675407 64675720 -188580863 - AluY SINE Alu 0 315 1 1109 173 10 90 chr2 64675720 64675841 -188580742 - AluJo SINE Alu -14 298 169 1885 134 24 10 chr2 64675841 64676139 -188580444 - AluSx SINE Alu -10 302 1 1109 173 10 90 chr2 64676139 64676306 -188580277 - AluJo SINE Alu -143 169 33 1377 218 7 7 chr2 64676384 64676687 -188579896 - AluJo SINE Alu -9 303 1 1841 134 11 0 chr2 64676790 64677066 -188579517 + AluSq SINE Alu 1 279 -34 34 0 0 0 chr2 64677066 64677100 -188579483 + AT_rich Low_complexity Low_complexity 1 34 0 2213 80 10 6 chr2 64677277 64677588 -188578995 + AluSp SINE Alu 1 312 -1 1044 159 89 11 chr2 64677776 64678047 -188578536 + AluSc SINE Alu 2 293 -6 2084 86 7 7 chr2 64678094 64678384 -188578199 + AluSx SINE Alu 1 290 -22 2050 117 3 0 chr2 64679600 64679898 -188576685 + AluSx SINE Alu 1 299 -13 221 229 16 41 chr2 64682618 64682740 -188573843 + (CCCCG)n Simple_repeat Simple_repeat 2 120 0 288 0 0 0 chr2 64682949 64682981 -188573602 + (CA)n Simple_repeat Simple_repeat 2 33 0 289 250 0 0 chr2 64683365 64683437 -188573146 + (CTG)n Simple_repeat Simple_repeat 2 73 0 243 211 0 56 chr2 64683712 64683815 -188572768 + G-rich Low_complexity Low_complexity 1 97 0 451 175 89 70 chr2 64685140 64685392 -188571191 - MER2 DNA MER2_type 0 345 97 463 95 0 152 chr2 64685392 64685459 -188571124 - MER6 DNA MER2_type 0 865 818 1953 127 7 0 chr2 64685459 64685766 -188570817 + AluSx SINE Alu 1 309 -3 463 95 0 152 chr2 64685766 64685803 -188570780 - MER6 DNA MER2_type -47 818 777 1771 114 4 39 chr2 64685803 64686083 -188570500 + AluJb SINE Alu 21 290 -22 435 248 141 8 chr2 64686149 64686270 -188570313 - FLAM_A SINE Alu -5 137 1 374 229 49 59 chr2 64686271 64686414 -188570169 + L1MC4 LINE L1 1968 6976 -1346 824 129 23 15 chr2 64686414 64686546 -188570037 - FLAM_C SINE Alu -8 135 3 1626 207 53 22 chr2 64687032 64687389 -188569194 - MLT1A2 LTR MaLR -6 368 1 2050 117 3 10 chr2 64687486 64687794 -188568789 + AluSc SINE Alu 1 306 -3 990 91 8 0 chr2 64687796 64687928 -188568655 + AluSq/x SINE Alu 1 133 -180 1366 194 20 7 chr2 64687931 64688224 -188568359 + AluJo SINE Alu 1 297 -15 204 226 0 0 chr2 64688251 64688304 -188568279 + A-rich Low_complexity Low_complexity 1 53 0 849 189 18 12 chr2 64688513 64688677 -188567906 + MER20 DNA MER1_type 55 219 0 1696 185 0 6 chr2 64688788 64689102 -188567481 - AluJb SINE Alu 0 312 1 591 193 47 76 chr2 64689324 64689367 -188567216 - MIR SINE MIR -1 261 218 2260 95 0 3 chr2 64689367 64689671 -188566912 - AluY SINE Alu -8 303 1 591 193 47 76 chr2 64689671 64689798 -188566785 - MIR SINE MIR -44 218 96 1855 158 3 7 chr2 64690011 64690315 -188566268 - AluJb SINE Alu -5 307 5 2008 94 17 10 chr2 64690835 64691132 -188565451 + AluSp SINE Alu 3 301 -12 289 180 33 0 chr2 64691133 64691194 -188565389 - L1MC4 LINE L1 -18 8024 7962 316 204 11 97 chr2 64691211 64691247 -188565336 + AluJ/FRAM SINE Alu 217 255 -47 3773 92 0 21 chr2 64691247 64691584 -188564999 - MER9 LTR ERVK 0 511 187 2169 90 0 7 chr2 64691584 64691906 -188564677 + AluSc SINE Alu 1 309 0 3773 92 0 21 chr2 64691906 64692090 -188564493 - MER9 LTR ERVK -324 187 1 316 204 11 97 chr2 64692090 64692146 -188564437 + AluJ/FRAM SINE Alu 255 301 -1 2136 122 0 3 chr2 64692150 64692461 -188564122 + AluSg SINE Alu 1 310 0 2063 126 0 0 chr2 64692466 64692759 -188563824 + AluSx SINE Alu 1 293 -19 1136 129 12 0 chr2 64692759 64692929 -188563654 + AluSg/x SINE Alu 134 305 -7 1029 175 25 0 chr2 64693058 64693243 -188563340 - AluJb SINE Alu 0 312 120 272 26 0 26 chr2 64693243 64693281 -188563302 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 1029 175 25 0 chr2 64693281 64693295 -188563288 - AluJb SINE Alu -192 120 108 1919 132 3 3 chr2 64693428 64693723 -188562860 - AluSx SINE Alu -12 300 6 38 22 0 0 chr2 64693926 64693971 -188562612 + AT_rich Low_complexity Low_complexity 1 45 0 772 132 26 0 chr2 64693971 64694085 -188562498 - AluJb SINE Alu -194 118 2 2019 69 29 4 chr2 64694093 64694392 -188562191 - AluY SINE Alu 0 308 3 2096 234 60 27 chr2 64694549 64694877 -188561706 + L1MC4a LINE L1 5254 5609 -2199 2156 111 0 3 chr2 64694877 64695175 -188561408 + AluSx SINE Alu 1 297 -15 2096 234 60 27 chr2 64695175 64695398 -188561185 + L1MC4a LINE L1 5609 5823 -1985 967 91 8 0 chr2 64695404 64695536 -188561047 + AluSq/x SINE Alu 3 135 -178 2074 88 14 3 chr2 64695536 64695832 -188560751 + AluY SINE Alu 1 299 -12 22 0 0 0 chr2 64695832 64695854 -188560729 + AT_rich Low_complexity Low_complexity 1 22 0 1615 107 4 4 chr2 64695881 64696114 -188560469 + AluSg SINE Alu 57 289 -21 216 0 0 0 chr2 64696117 64696141 -188560442 + (TATAA)n Simple_repeat Simple_repeat 2 25 0 2340 76 3 0 chr2 64696159 64696461 -188560122 + AluSp SINE Alu 3 305 -8 657 96 0 11 chr2 64696461 64696555 -188560028 + AluSq SINE Alu 134 226 -87 452 217 93 16 chr2 64696562 64696691 -188559892 + L1MC4a LINE L1 5812 5950 -1858 1342 162 17 67 chr2 64696747 64697044 -188559539 + AluJb SINE Alu 16 297 -15 2104 109 0 10 chr2 64697093 64697396 -188559187 + AluSg SINE Alu 1 300 -10 2307 88 0 0 chr2 64697745 64698052 -188558531 - AluY SINE Alu -4 307 1 256 254 45 64 chr2 64698104 64698214 -188558369 + L2 LINE L2 3158 3265 -7 363 329 117 51 chr2 64698216 64698450 -188558133 - L2 LINE L2 -1 3271 3009 2191 110 0 0 chr2 64698450 64698759 -188557824 + AluSq SINE Alu 1 309 -4 363 329 117 51 chr2 64698759 64698840 -188557743 - L2 LINE L2 -263 3009 2935 1574 172 30 14 chr2 64699045 64699342 -188557241 + AluJb SINE Alu 6 307 -5 24 0 0 0 chr2 64699890 64699914 -188556669 + AT_rich Low_complexity Low_complexity 1 24 0 2269 93 3 3 chr2 64699936 64700246 -188556337 - AluSx SINE Alu -2 310 1 767 165 0 0 chr2 64700442 64700563 -188556020 + FLAM_C SINE Alu 4 124 -19 1547 158 50 11 chr2 64701094 64701372 -188555211 - AluJb SINE Alu -19 293 5 812 224 30 59 chr2 64701683 64701920 -188554663 - MIR SINE MIR -2 260 31 2259 95 0 3 chr2 64701921 64702227 -188554356 - AluY SINE Alu -6 305 1 2147 95 3 3 chr2 64702229 64702524 -188554059 - AluSg SINE Alu -15 295 1 1229 162 0 14 chr2 64702584 64702800 -188553783 + AluJo SINE Alu 85 297 -15 429 125 0 100 chr2 64702805 64702885 -188553698 - FLAM_A SINE Alu -36 106 35 1059 101 25 0 chr2 64702888 64703047 -188553536 + L1MA6 LINE L1 6138 6300 0 2307 93 0 0 chr2 64703054 64703356 -188553227 + AluSx SINE Alu 1 302 -10 1443 173 24 10 chr2 64703430 64703719 -188552864 + AluJb SINE Alu 1 293 -19 829 197 79 0 chr2 64703725 64703877 -188552706 + FRAM SINE Alu 1 162 -14 328 227 40 13 chr2 64704383 64704417 -188552166 + (TA)n Simple_repeat Simple_repeat 2 34 -121 1781 142 0 7 chr2 64704417 64704705 -188551878 + AluSx SINE Alu 1 286 -26 328 227 40 13 chr2 64704705 64704820 -188551763 + (TA)n Simple_repeat Simple_repeat 34 155 0 2025 109 0 0 chr2 64704953 64705229 -188551354 - AluSx SINE Alu -31 281 6 1690 164 3 10 chr2 64705259 64705551 -188551032 - AluJo SINE Alu -20 292 3 351 0 0 0 chr2 64705552 64705591 -188550992 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1896 96 41 0 chr2 64705593 64705864 -188550719 - AluSx SINE Alu -30 282 1 226 167 19 37 chr2 64705926 64705980 -188550603 - L2 LINE L2 0 3313 3261 954 188 6 6 chr2 64706099 64706280 -188550303 + FRAM SINE Alu 1 174 -2 536 196 0 0 chr2 64706287 64706384 -188550199 - FLAM_C SINE Alu -26 117 21 448 191 101 0 chr2 64706555 64706644 -188549939 + FLAM_A SINE Alu 27 124 -18 1937 85 25 28 chr2 64706668 64706974 -188549609 + AluSq SINE Alu 5 309 0 2082 127 0 0 chr2 64706983 64707283 -188549300 + AluSc SINE Alu 1 300 -9 2051 104 14 3 chr2 64707452 64707741 -188548842 - AluSq SINE Alu -21 292 1 273 98 0 0 chr2 64707760 64707801 -188548782 + (TG)n Simple_repeat Simple_repeat 2 42 0 2239 49 49 0 chr2 64707884 64708170 -188548413 - AluY SINE Alu -11 300 1 1103 187 22 52 chr2 64708187 64708455 -188548128 - AluJo SINE Alu -23 289 30 243 0 0 0 chr2 64708462 64708489 -188548094 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2144 78 0 7 chr2 64708491 64708774 -188547809 - AluSc SINE Alu -28 281 1 2363 116 0 6 chr2 64708774 64709111 -188547472 + MER9 LTR ERVK 177 511 0 283 162 29 29 chr2 64709164 64709226 -188547357 + L1MC4 LINE L1 7962 8024 -13 1915 82 19 7 chr2 64709226 64709495 -188547088 - AluSp SINE Alu -13 300 29 211 150 33 0 chr2 64710017 64710077 -188546506 + (CCG)n Simple_repeat Simple_repeat 2 63 0 1638 127 27 33 chr2 64710666 64710965 -188545618 + AluJo SINE Alu 4 300 -12 2316 59 0 3 chr2 64710991 64711296 -188545287 + AluY SINE Alu 1 304 -7 23 68 0 0 chr2 64711637 64711681 -188544902 + AT_rich Low_complexity Low_complexity 1 44 0 704 152 23 30 chr2 64711681 64711813 -188544770 + AluJo SINE Alu 85 215 -97 284 141 0 103 chr2 64712608 64712686 -188543897 + AluS SINE Alu 233 302 0 3712 152 29 38 chr2 64712689 64713147 -188543436 - L1MC1 LINE L1 -257 6076 5625 180 77 0 0 chr2 64713147 64713173 -188543410 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 3712 152 29 38 chr2 64713173 64713407 -188543176 - L1MC1 LINE L1 -708 5625 5390 1690 108 100 4 chr2 64713407 64713705 -188542878 - AluSx SINE Alu 0 323 1 202 303 56 11 chr2 64713715 64713804 -188542779 + MIR SINE MIR 99 191 -71 237 149 45 0 chr2 64716054 64716119 -188540464 - L1P LINE L1 -733 5423 5353 225 278 75 45 chr2 64716377 64716510 -188540073 - L2 LINE L2 -559 2755 2619 880 88 0 22 chr2 64716513 64716649 -188539934 + AluSq/x SINE Alu 1 133 -179 39 60 0 0 chr2 64717324 64717391 -188539192 + GC_rich Low_complexity Low_complexity 1 67 0 405 0 0 0 chr2 64717502 64717547 -188539036 + (CTATT)n Simple_repeat Simple_repeat 1 45 0 4027 216 17 17 chr2 64717561 64717964 -188538619 - L1M4 LINE L1 -1359 4787 4385 2127 112 0 0 chr2 64717964 64718259 -188538324 - AluSq SINE Alu -18 295 1 4027 216 17 17 chr2 64718259 64718848 -188537735 - L1M4 LINE L1 -1760 4386 3795 1335 227 37 0 chr2 64718851 64719177 -188537406 + L1M4 LINE L1 4106 4443 -1703 * 1534 104 40 12 chr2 64719153 64719403 -188537180 + L1PA16 LINE L1 5660 5916 -250 295 65 174 0 chr2 64719504 64719550 -188537033 - AluSc SINE Alu -186 113 60 1293 104 5 21 chr2 64719550 64719743 -188536840 - AluSx SINE Alu -122 190 1 1984 141 0 3 chr2 64720625 64720929 -188535654 + AluSq SINE Alu 1 303 -10 450 0 0 0 chr2 64721245 64721295 -188535288 + (TC)n Simple_repeat Simple_repeat 2 51 0 351 0 0 0 chr2 64721294 64721333 -188535250 + (TG)n Simple_repeat Simple_repeat 2 40 0 * 2038 112 14 0 chr2 64722054 64722350 -188534233 - AluSx SINE Alu -12 300 1 248 261 15 15 chr2 64722353 64722418 -188534165 + L2 LINE L2 3204 3268 -4 261 229 34 102 chr2 64722665 64722783 -188533800 + L2 LINE L2 2614 2723 -591 1744 179 3 3 chr2 64722821 64723133 -188533450 + AluJb SINE Alu 1 312 0 541 248 23 8 chr2 64723231 64723360 -188533223 + L2 LINE L2 2921 3051 -262 321 151 0 0 chr2 64723374 64723427 -188533156 + MER74B LTR ERVL 1 53 -569 204 67 0 0 chr2 64723463 64723493 -188533090 + (CA)n Simple_repeat Simple_repeat 1 30 0 662 169 0 78 chr2 64723518 64723660 -188532923 + FLAM_C SINE Alu 1 131 -2 1333 216 66 0 chr2 64723665 64723966 -188532617 + MER74B LTR ERVL 205 525 -97 2049 68 4 0 chr2 64724070 64724355 -188532228 + AluY SINE Alu 22 311 0 2338 63 10 0 chr2 64724358 64724657 -188531926 + AluY SINE Alu 1 302 -9 257 219 16 0 chr2 64724672 64724736 -188531847 + AluSp/q SINE Alu 232 296 -7 2104 134 0 0 chr2 64724773 64725078 -188531505 + AluSx SINE Alu 1 305 -7 4926 124 26 11 chr2 64725080 64725908 -188530675 + L1P3 LINE L1 939 1814 -4644 420 82 0 0 chr2 64725909 64725970 -188530613 + (TTTG)n Simple_repeat Simple_repeat 4 64 0 1538 181 0 0 chr2 64725970 64726230 -188530353 - AluSg SINE Alu -32 278 19 827 208 19 25 chr2 64726396 64726555 -188530028 - FAM SINE Alu -17 158 1 687 267 83 88 chr2 64726608 64726961 -188529622 - L1MC4a LINE L1 -1844 5964 5612 357 151 75 21 chr2 64726961 64727054 -188529529 - L1MB2 LINE L1 0 6171 6074 687 267 83 88 chr2 64727054 64727145 -188529438 - L1MC4a LINE L1 -2196 5612 5522 254 245 179 28 chr2 64727203 64727309 -188529274 + MIR SINE MIR 5 127 -81 665 104 0 43 chr2 64727341 64727456 -188529127 + L1M3 LINE L1 5709 5818 -353 669 226 8 0 chr2 64727467 64727600 -188528983 + AluSq/x SINE Alu 3 136 -177 2235 103 0 3 chr2 64727600 64727902 -188528681 + AluSx SINE Alu 1 301 -11 963 146 82 50 chr2 64727951 64728171 -188528412 + AluJo SINE Alu 86 312 0 758 54 0 0 chr2 64728314 64728406 -188528177 + AluSg/x SINE Alu 199 290 -20 191 260 117 26 chr2 64728522 64728599 -188527984 + MIR SINE MIR 179 262 0 195 236 109 18 chr2 64728609 64728664 -188527919 + L2 LINE L2 3232 3291 -22 2290 98 0 0 chr2 64728768 64729073 -188527510 - AluSg SINE Alu -5 305 1 603 199 69 0 chr2 64729114 64729245 -188527338 - LTR33A LTR ERVL -7 516 377 755 194 0 0 chr2 64729246 64729375 -188527208 + FLAM_C SINE Alu 2 130 -13 1824 158 3 6 chr2 64729382 64729693 -188526890 + AluSx SINE Alu 1 310 -2 22 0 0 0 chr2 64729694 64729716 -188526867 + AT_rich Low_complexity Low_complexity 1 22 0 2216 99 3 3 chr2 64729720 64730033 -188526550 + AluSp SINE Alu 1 313 0 910 224 206 30 chr2 64730035 64730365 -188526218 - LTR33A LTR ERVL -129 394 7 266 256 13 0 chr2 64730365 64730443 -188526140 + (TA)n Simple_repeat Simple_repeat 2 80 0 1421 170 0 4 chr2 64730635 64730908 -188525675 - AluSx SINE Alu 0 315 44 1561 182 0 16 chr2 64731066 64731374 -188525209 - AluJo SINE Alu -9 303 1 1071 189 62 48 chr2 64731384 64731422 -188525161 + L1MC4 LINE L1 7678 7714 -328 2086 125 0 0 chr2 64731422 64731725 -188524858 + AluSq SINE Alu 1 303 -10 1071 189 62 48 chr2 64731725 64731983 -188524600 + L1MC4 LINE L1 7714 7982 -60 1744 179 3 0 chr2 64731983 64732280 -188524303 - AluJb SINE Alu -14 298 1 1071 189 62 48 chr2 64732280 64732337 -188524246 + L1MC4 LINE L1 7982 8037 -5 1359 139 5 0 chr2 64732342 64732544 -188524039 + AluSx SINE Alu 1 203 -109 739 168 0 0 chr2 64732585 64732698 -188523885 - AluSq/x SINE Alu -199 114 2 231 336 20 17 chr2 64732813 64733011 -188523572 + C-rich Low_complexity Low_complexity 1 198 0 231 103 0 0 chr2 64733208 64733228 -188523355 + (TAGA)n Simple_repeat Simple_repeat 1 59 0 231 103 0 0 chr2 64733228 64733267 -188523316 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 761 158 17 0 chr2 64733352 64733472 -188523111 - FLAM_A SINE Alu -13 129 8 1942 150 0 7 chr2 64733484 64733790 -188522793 - AluSx SINE Alu -8 304 1 1368 188 33 14 chr2 64733838 64734114 -188522469 - AluJo SINE Alu -31 281 1 1230 187 42 0 chr2 64734131 64734393 -188522190 - L1MA9 LINE L1 -39 6273 6001 1949 175 139 34 chr2 64734439 64734935 -188521648 + LTR10A LTR ERV1 1 548 -61 387 134 179 0 chr2 64734948 64735015 -188521568 - MLT1D LTR MaLR -426 79 1 812 189 0 0 chr2 64735755 64735887 -188520696 - AluSq/x SINE Alu -180 133 2 629 173 62 106 chr2 64736032 64736211 -188520372 - AluJb SINE Alu -5 307 137 771 138 15 0 chr2 64736325 64736455 -188520128 - LTR54 LTR ERV1 -374 136 5 2418 56 3 3 chr2 64736478 64736781 -188519802 - AluY SINE Alu -8 303 1 2161 117 0 3 chr2 64736784 64737091 -188519492 - AluSx SINE Alu -1 311 6 2144 90 0 27 chr2 64737473 64737774 -188518809 + AluSg SINE Alu 1 293 -17 2059 141 0 0 chr2 64737956 64738268 -188518315 - AluSx SINE Alu 0 312 1 1956 116 18 0 chr2 64738319 64738617 -188517966 - AluSx SINE Alu 0 303 1 232 259 0 0 chr2 64739105 64739159 -188517424 - MER57B LTR ERV1 -55 379 326 493 90 0 0 chr2 64739343 64739410 -188517173 - MSTB1 LTR MaLR -365 67 1 654 217 39 0 chr2 64739410 64739539 -188517044 + LTR16A LTR ERVL 199 332 -118 337 342 26 8 chr2 64739629 64739746 -188516837 - MIR SINE MIR -74 134 16 24 0 0 0 chr2 64739962 64739986 -188516597 + AT_rich Low_complexity Low_complexity 1 24 0 1432 164 52 21 chr2 64739995 64740281 -188516302 - AluJb SINE Alu -17 295 1 445 290 96 88 chr2 64740353 64740718 -188515865 + MLT1K LTR MaLR 190 557 -31 418 277 62 31 chr2 64740914 64741109 -188515474 - L1ME LINE L1 -335 5786 5586 1481 170 13 55 chr2 64741183 64741494 -188515089 - AluJo SINE Alu -14 298 1 2268 81 0 16 chr2 64741897 64742204 -188514379 - AluY SINE Alu -9 302 1 576 212 8 17 chr2 64742280 64742398 -188514185 + L2 LINE L2 3197 3313 0 1249 126 0 0 chr2 64742437 64742611 -188513972 - AluJb SINE Alu -138 174 1 1715 168 7 7 chr2 64743028 64743332 -188513251 + AluJo SINE Alu 1 304 -8 24 0 0 0 chr2 64743630 64743654 -188512929 + AT_rich Low_complexity Low_complexity 1 24 0 1055 186 128 21 chr2 64743682 64743924 -188512659 - AluJo SINE Alu -44 268 1 1792 156 3 0 chr2 64743927 64744248 -188512335 - AluJo SINE Alu 0 322 1 413 183 100 67 chr2 64744276 64744396 -188512187 + MLT1C LTR MaLR 1 124 -343 802 163 0 0 chr2 64744400 64744523 -188512060 + FLAM_C SINE Alu 3 125 -18 575 42 0 0 chr2 64744540 64744611 -188511972 + MER41A LTR ERV1 398 468 -86 1457 184 77 25 chr2 64744639 64744965 -188511618 + LOR1b LTR ERV1 119 461 0 3256 143 2 8 chr2 64745019 64745595 -188510988 - MER41B LTR ERV1 0 635 1 828 225 64 36 chr2 64745595 64745831 -188510752 + MLT1C LTR MaLR 223 465 -2 247 278 87 0 chr2 64745831 64745946 -188510637 - L1M4 LINE L1 -999 5147 5023 1933 151 3 0 chr2 64745949 64746260 -188510323 - AluJb SINE Alu 0 312 1 986 226 28 23 chr2 64746265 64746482 -188510101 + MER20 DNA MER1_type 1 218 -1 525 265 42 0 chr2 64746484 64746650 -188509933 - L1M4 LINE L1 -1559 4587 4415 21 57 0 0 chr2 64746680 64746715 -188509868 + AT_rich Low_complexity Low_complexity 1 35 0 3182 120 2 2 chr2 64746772 64747204 -188509379 + LTR3 LTR ERVK 1 432 0 359 167 28 28 chr2 64747207 64747279 -188509304 - tRNA-Lys-AAA tRNA tRNA 0 76 5 3539 147 38 56 chr2 64747281 64747364 -188509219 - L1MB5 LINE L1 -160 6014 5931 1712 142 14 14 chr2 64747364 64747669 -188508914 - AluJb SINE Alu 0 312 7 3539 147 38 56 chr2 64747669 64747819 -188508764 - L1MB5 LINE L1 -243 5931 5780 276 30 0 0 chr2 64747819 64747852 -188508731 + (TG)n Simple_repeat Simple_repeat 2 34 0 3539 147 38 56 chr2 64747852 64748326 -188508257 - L1MB5 LINE L1 -394 5780 5319 555 198 0 0 chr2 64748362 64748485 -188508098 - AluSg/x SINE Alu 0 311 189 821 158 0 0 chr2 64748612 64748739 -188507844 + AluSg/x SINE Alu 167 293 -17 1967 107 0 50 chr2 64748970 64749287 -188507296 - AluSq SINE Alu -12 301 1 324 276 114 16 chr2 64749452 64749575 -188507008 - L1MEd LINE L1 -5983 136 2 1250 159 4 9 chr2 64749643 64749869 -188506714 - AluJo SINE Alu 0 312 88 23 0 0 0 chr2 64749878 64749901 -188506682 + AT_rich Low_complexity Low_complexity 1 23 0 1343 199 26 22 chr2 64749938 64750210 -188506373 + AluJb SINE Alu 31 303 -9 1881 128 4 4 chr2 64750215 64750496 -188506087 + AluSx SINE Alu 2 282 -30 202 143 24 0 chr2 64750532 64750574 -188506009 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 254 128 21 0 chr2 64750582 64750629 -188505954 - L1MB8 LINE L1 -19 6159 6112 2190 97 0 10 chr2 64750630 64750929 -188505654 + AluSq SINE Alu 1 296 -17 913 137 55 0 chr2 64750929 64751137 -188505446 + AluSg/x SINE Alu 134 349 0 1355 175 93 4 chr2 64751152 64751409 -188505174 + AluJb SINE Alu 1 280 -32 322 21 21 21 chr2 64751410 64751458 -188505125 + (TAAA)n Simple_repeat Simple_repeat 1 48 0 1391 165 46 11 chr2 64751462 64751751 -188504832 - L1MB8 LINE L1 -61 6117 5816 234 316 38 0 chr2 64751923 64752002 -188504581 + LTR67 LTR ERVL 114 195 -362 2152 119 0 0 chr2 64752338 64752641 -188503942 + AluSx SINE Alu 1 303 -9 240 278 115 68 chr2 64752659 64752780 -188503803 - L3b LINE CR1 -115 1468 1354 1366 196 44 22 chr2 64752780 64752958 -188503625 - MER33 DNA MER1_type -2261 324 151 2204 62 62 0 chr2 64752958 64753247 -188503336 + AluY SINE Alu 1 307 -4 1430 202 13 13 chr2 64753254 64753561 -188503022 + AluJo SINE Alu 5 311 -1 1366 196 44 22 chr2 64753561 64753691 -188502892 - MER33 DNA MER1_type -2439 146 1 240 278 115 68 chr2 64753691 64753803 -188502780 - L3b LINE CR1 -229 1354 1224 * 791 330 58 43 chr2 64753795 64754264 -188502319 + L2 LINE L2 2837 3312 -1 2149 115 3 6 chr2 64754276 64754629 -188501954 - AluSx SINE Alu 0 352 1 2190 58 0 89 chr2 64754637 64754962 -188501621 - AluY SINE Alu -15 296 1 806 107 0 0 chr2 64755300 64755412 -188501171 + AluSq/x SINE Alu 3 114 -198 1532 91 0 5 chr2 64755512 64755720 -188500863 - AluSc SINE Alu -102 207 1 198 118 0 0 chr2 64755794 64755828 -188500755 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 2053 88 4 0 chr2 64755832 64756106 -188500477 - AluSx SINE Alu -37 275 1 223 195 0 0 chr2 64756682 64756723 -188499860 - L2 LINE L2 0 3313 3273 2191 99 0 0 chr2 64756813 64757105 -188499478 - AluSc SINE Alu -17 292 1 1736 143 0 20 chr2 64757466 64757760 -188498823 - AluJb SINE Alu -24 288 1 396 273 86 16 chr2 64758040 64758168 -188498415 - L2 LINE L2 0 3313 3177 1681 155 16 50 chr2 64758365 64758682 -188497901 + AluJo SINE Alu 1 306 -6 1865 117 71 37 chr2 64758909 64759235 -188497348 + MER1B DNA MER1_type 1 337 0 23 33 0 0 chr2 64759902 64759932 -188496651 + AT_rich Low_complexity Low_complexity 1 30 0 350 201 104 28 chr2 64760358 64760479 -188496104 - L1ME4a LINE L1 0 6121 5986 2292 88 0 3 chr2 64760479 64760786 -188495797 - AluSx SINE Alu 0 312 7 350 201 104 28 chr2 64760786 64760808 -188495775 - L1ME4a LINE L1 -135 5986 5967 668 130 8 107 chr2 64760829 64760960 -188495623 - FLAM_C SINE Alu -15 118 1 25 0 0 0 chr2 64761122 64761147 -188495436 + AT_rich Low_complexity Low_complexity 1 25 0 221 350 80 0 chr2 64761327 64761427 -188495156 + MER91C DNA MER1_type 1 108 -32 2019 88 23 36 chr2 64761562 64761868 -188494715 - AluSx SINE Alu -10 302 1 1828 306 37 17 chr2 64761952 64762599 -188493984 - HERV16 LTR ERVL -4278 718 59 581 202 230 39 chr2 64762641 64762726 -188493857 - LTR16A LTR ERVL -6 444 377 1853 100 0 4 chr2 64762726 64763002 -188493581 + AluSx SINE Alu 35 309 0 581 202 230 39 chr2 64763002 64763093 -188493490 - LTR16A LTR ERVL -73 377 233 1598 179 96 88 chr2 64763099 64763653 -188492930 + LTR49 LTR ERV1 5 562 -33 25 21 0 43 chr2 64763660 64763678 -188492905 + AT_rich Low_complexity Low_complexity 1 18 -27 1518 158 73 0 chr2 64763678 64763950 -188492633 + AluJb SINE Alu 2 293 -19 25 21 0 43 chr2 64763950 64763978 -188492605 + AT_rich Low_complexity Low_complexity 18 45 0 801 145 0 0 chr2 64763987 64764111 -188492472 + FLAM_C SINE Alu 3 126 -17 459 278 36 40 chr2 64764194 64764417 -188492166 - LTR16A LTR ERVL -222 228 7 400 288 11 102 chr2 64764604 64764639 -188491944 - MIR3 SINE MIR -32 176 139 2120 108 7 3 chr2 64764639 64764944 -188491639 - AluSx SINE Alu -6 306 1 400 288 11 102 chr2 64764944 64765085 -188491498 - MIR3 SINE MIR -69 139 16 23 33 0 0 chr2 64765211 64765241 -188491342 + AT_rich Low_complexity Low_complexity 1 30 0 1826 70 8 8 chr2 64765872 64766113 -188490470 + LTR9 LTR ERV1 1 241 -371 551 108 0 0 chr2 64766214 64766297 -188490286 + Alu SINE Alu 222 304 -5 21 36 0 0 chr2 64766356 64766384 -188490199 + AT_rich Low_complexity Low_complexity 1 28 0 2103 97 0 47 chr2 64766416 64766590 -188489993 - AluSx SINE Alu -6 306 152 2287 81 0 3 chr2 64766590 64766898 -188489685 - AluY SINE Alu -4 307 1 2103 97 0 47 chr2 64766898 64767044 -188489539 - AluSx SINE Alu -160 152 1 1473 154 0 4 chr2 64767050 64767290 -188489293 - AluJb SINE Alu -1 311 73 596 175 0 0 chr2 64767305 64767402 -188489181 - AluJ/FLAM SINE Alu -213 99 3 32 26 0 0 chr2 64767449 64767488 -188489095 + AT_rich Low_complexity Low_complexity 1 39 0 2082 73 30 23 chr2 64767745 64768047 -188488536 + AluY SINE Alu 1 304 -7 236 275 87 0 chr2 64769895 64769964 -188486619 + MIR3 SINE MIR 2 76 -132 207 275 29 14 chr2 64770168 64770237 -188486346 - L2 LINE L2 -2 3311 3242 21 82 0 0 chr2 64770326 64770375 -188486208 + AT_rich Low_complexity Low_complexity 1 49 0 1431 160 4 16 chr2 64770472 64770630 -188485953 - AluSx SINE Alu -20 292 137 2002 117 7 7 chr2 64770630 64770929 -188485654 - AluSx SINE Alu -13 299 1 1431 160 4 16 chr2 64770929 64771020 -188485563 - AluSx SINE Alu -175 137 46 668 122 0 0 chr2 64771021 64771111 -188485472 - AluS SINE Alu -222 91 2 1582 193 0 46 chr2 64771114 64771441 -188485142 - AluJb SINE Alu 0 312 1 408 309 9 0 chr2 64771498 64771608 -188484975 - L2 LINE L2 -2 3311 3201 2255 98 7 0 chr2 64771642 64771948 -188484635 + AluSp SINE Alu 1 308 -5 2374 76 0 0 chr2 64771959 64772263 -188484320 + AluY SINE Alu 1 304 -7 1693 150 14 14 chr2 64772556 64772842 -188483741 + AluJo SINE Alu 3 288 -24 2042 111 10 3 chr2 64772849 64773156 -188483427 + AluSc SINE Alu 1 309 0 289 272 107 70 chr2 64773157 64773398 -188483185 + L2 LINE L2 2736 2997 -275 937 164 0 0 chr2 64773826 64773972 -188482611 + AluJb SINE Alu 137 282 -30 303 382 16 21 chr2 64773998 64774184 -188482399 - L2 LINE L2 -640 2674 2490 2375 84 0 0 chr2 64774199 64774495 -188482088 - AluY SINE Alu -15 296 1 238 217 78 62 chr2 64774500 64774629 -188481954 + L2 LINE L2 3183 3313 0 2061 96 37 0 chr2 64774691 64774996 -188481587 + AluSx SINE Alu 1 315 0 1809 164 3 10 chr2 64774997 64775289 -188481294 + AluJo SINE Alu 3 292 -20 2135 117 0 0 chr2 64775314 64775595 -188480988 + AluSx SINE Alu 1 281 -31 328 227 40 13 chr2 64775728 64775843 -188480740 + (TA)n Simple_repeat Simple_repeat 2 123 -32 1897 142 0 7 chr2 64775843 64776131 -188480452 - AluSx SINE Alu -26 286 1 328 227 40 13 chr2 64776131 64776165 -188480418 + (TA)n Simple_repeat Simple_repeat 123 155 0 820 193 80 0 chr2 64776671 64776821 -188479762 - FRAM SINE Alu -14 162 1 1604 166 24 10 chr2 64776829 64777118 -188479465 - AluJb SINE Alu -19 293 1 2440 93 0 0 chr2 64777192 64777494 -188479089 - AluSx SINE Alu -10 302 1 1074 101 25 0 chr2 64777501 64777660 -188478923 - L1MA6 LINE L1 0 6300 6138 426 125 0 100 chr2 64777663 64777743 -188478840 + FLAM_A SINE Alu 35 106 -36 1334 157 0 14 chr2 64777748 64777964 -188478619 - AluJo SINE Alu -15 297 85 2271 102 3 0 chr2 64778024 64778319 -188478264 + AluY SINE Alu 1 296 -15 2360 96 0 3 chr2 64778321 64778624 -188477959 + AluY SINE Alu 1 302 -9 711 224 30 59 chr2 64778628 64778865 -188477718 + MIR SINE MIR 31 260 -2 1659 158 50 11 chr2 64779176 64779454 -188477129 + AluJb SINE Alu 5 293 -19 765 188 0 0 chr2 64779968 64780106 -188476477 - FLAM_C SINE Alu -2 141 4 2399 93 3 3 chr2 64780302 64780612 -188475971 + AluSx SINE Alu 1 310 -2 24 0 0 0 chr2 64780634 64780658 -188475925 + AT_rich Low_complexity Low_complexity 1 24 0 1681 172 30 14 chr2 64781206 64781503 -188475080 - AluJb SINE Alu -5 307 6 2313 110 0 0 chr2 64781788 64782097 -188474486 - AluSq SINE Alu -4 309 1 317 235 176 17 chr2 64782212 64782331 -188474252 + L2 LINE L2 3134 3271 -1 215 254 45 64 chr2 64782333 64782443 -188474140 - L2 LINE L2 -7 3265 3158 2397 80 0 7 chr2 64782495 64782797 -188473786 + AluY SINE Alu 1 300 -11 2146 124 3 0 chr2 64782800 64783083 -188473500 + AluSc SINE Alu 1 284 -25 1753 189 68 31 chr2 64783572 64783954 -188472629 - MSTD LTR MaLR 0 396 1 359 217 118 81 chr2 64784064 64784225 -188472358 - MIR SINE MIR -50 212 46 194 343 61 0 chr2 64784552 64784651 -188471932 + L2 LINE L2 3122 3226 -46 289 209 88 44 chr2 64784731 64784822 -188471761 + MER21B LTR ERV1 12 106 -757 2210 112 7 0 chr2 64784828 64785122 -188471461 - AluSx SINE Alu -16 296 1 3046 257 61 26 chr2 64785122 64785311 -188471272 + L2 LINE L2 1789 1970 -1344 2022 102 0 93 chr2 64785311 64785634 -188470949 - AluY SINE Alu -18 293 1 3046 257 61 26 chr2 64785634 64785891 -188470692 + L2 LINE L2 1970 2217 -1097 1811 171 13 70 chr2 64785891 64786278 -188470305 - MLT1A1 LTR MaLR 0 365 1 3046 257 61 26 chr2 64786278 64786948 -188469635 + L2 LINE L2 2217 2945 -369 1683 137 9 59 chr2 64787140 64787282 -188469301 - L1MD1 LINE L1 -15 6227 6079 2531 39 10 13 chr2 64787282 64787587 -188468996 + AluY SINE Alu 1 304 -7 1683 137 9 59 chr2 64787587 64787766 -188468817 - L1MD1 LINE L1 -163 6079 5922 2219 117 3 0 chr2 64787769 64788077 -188468506 + AluSx SINE Alu 4 312 0 720 168 46 0 chr2 64788092 64788223 -188468360 - MER5A DNA MER1_type -52 137 1 373 200 24 24 chr2 64788379 64788464 -188468119 + L2 LINE L2 3188 3272 0 189 0 0 0 chr2 64788734 64788755 -188467828 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 2184 116 3 0 chr2 64788826 64789118 -188467465 + AluSq SINE Alu 2 294 -19 1236 226 30 21 chr2 64789243 64789571 -188467012 + MER46C DNA MER2_type 2 332 -6 2171 109 0 0 chr2 64790252 64790578 -188466005 - AluSx SINE Alu 0 326 1 541 248 0 81 chr2 64791072 64791160 -188465423 + MIR SINE MIR 20 93 -169 2282 91 3 0 chr2 64791160 64791456 -188465127 - AluY SINE Alu -14 297 1 541 248 0 81 chr2 64791456 64791516 -188465067 + MIR SINE MIR 93 156 -106 2459 72 3 19 chr2 64791641 64791948 -188464635 - AluSp SINE Alu -11 302 1 915 104 129 25 chr2 64792308 64792471 -188464112 + MER2 DNA MER2_type 1 180 -165 282 107 18 0 chr2 64792480 64792530 -188464053 - Alu SINE Alu -263 37 2 797 283 138 34 chr2 64792788 64793302 -188463281 + L1ME4a LINE L1 5256 5823 -298 714 153 59 0 chr2 64793308 64793426 -188463157 + FLAM_C SINE Alu 1 125 -8 192 97 0 0 chr2 64793426 64793457 -188463126 + (TA)n Simple_repeat Simple_repeat 2 32 0 2499 65 7 0 chr2 64794834 64795141 -188461442 - AluSx SINE Alu -3 309 1 278 245 75 0 chr2 64795350 64795444 -188461139 - L1ME4a LINE L1 -56 6065 5965 241 239 92 37 chr2 64795504 64795613 -188460970 + L1ME4a LINE L1 6003 6117 -4 2246 104 0 3 chr2 64795622 64795919 -188460664 - AluSg SINE Alu -14 296 1 234 259 199 76 chr2 64796053 64796269 -188460314 + HAL1 LINE L1 3 272 -2235 2031 136 3 10 chr2 64796269 64796571 -188460012 + AluJb SINE Alu 1 300 -12 234 259 199 76 chr2 64796571 64796670 -188459913 + HAL1 LINE L1 272 357 -2150 2011 129 14 0 chr2 64796670 64796950 -188459633 + AluSx SINE Alu 1 284 -28 234 0 0 0 chr2 64796950 64796976 -188459607 + (TA)n Simple_repeat Simple_repeat 2 27 0 882 197 53 76 chr2 64796981 64797148 -188459435 - MLT1A2 LTR MaLR -68 306 146 2385 83 17 0 chr2 64797148 64797448 -188459135 + AluY SINE Alu 1 305 -6 882 197 53 76 chr2 64797448 64797544 -188459039 - MLT1A2 LTR MaLR -228 146 49 2291 81 0 3 chr2 64797610 64797949 -188458634 - AluY SINE Alu 0 339 2 2093 113 3 10 chr2 64797950 64798241 -188458342 - AluSq SINE Alu -19 294 6 1720 180 78 9 chr2 64798253 64798575 -188458008 - MSTB1 LTR MaLR -85 347 4 1165 89 0 0 chr2 64799196 64799353 -188457230 - AluSg/x SINE Alu -19 293 137 2432 68 0 16 chr2 64799412 64799722 -188456861 - AluY SINE Alu -6 305 1 21 36 0 0 chr2 64799797 64799825 -188456758 + AT_rich Low_complexity Low_complexity 1 28 0 247 346 61 19 chr2 64800418 64800485 -188456098 - L2 LINE L2 -212 3060 2997 2104 150 0 0 chr2 64800485 64800785 -188455798 + AluSx SINE Alu 1 300 -12 247 346 61 19 chr2 64800785 64800931 -188455652 - L2 LINE L2 -275 2997 2838 1307 196 14 22 chr2 64801169 64801634 -188454949 + MLT1F1 LTR MaLR 1 567 0 2069 102 17 14 chr2 64801655 64801949 -188454634 - AluSq SINE Alu -18 295 1 21 0 0 0 chr2 64802899 64802920 -188453663 + AT_rich Low_complexity Low_complexity 1 21 0 1077 246 107 57 chr2 64803357 64803589 -188452994 + Tigger8 DNA MER2_type 40 259 -407 2168 126 0 7 chr2 64803589 64803899 -188452684 + AluSx SINE Alu 4 311 -1 1077 246 107 57 chr2 64803899 64804142 -188452441 + Tigger8 DNA MER2_type 259 539 -127 1634 159 24 27 chr2 64804142 64804437 -188452146 + AluJb SINE Alu 2 295 -17 1109 124 6 11 chr2 64805204 64805381 -188451202 + MER50 LTR ERV1 1 176 -558 1178 129 41 0 chr2 64805384 64805555 -188451028 + AluSg/x SINE Alu 134 311 -1 2117 133 7 0 chr2 64805586 64805886 -188450697 + AluJb SINE Alu 1 302 -10 189 107 0 0 chr2 64805889 64805917 -188450666 + (GGAAA)n Simple_repeat Simple_repeat 3 30 0 339 68 0 0 chr2 64805917 64805961 -188450622 + MER50 LTR ERV1 182 225 -509 * 1371 127 12 63 chr2 64805958 64806025 -188450558 + MER50 LTR ERV1 433 502 -232 2163 80 3 33 chr2 64806025 64806325 -188450258 + AluY SINE Alu 1 291 -20 1371 127 12 63 chr2 64806325 64806510 -188450073 + MER50 LTR ERV1 502 672 -62 412 143 8 47 chr2 64807006 64807253 -188449330 + AluJo SINE Alu 7 296 -16 2060 55 0 20 chr2 64807366 64807620 -188448963 + AluSg SINE Alu 50 298 -12 397 149 0 64 chr2 64807620 64807714 -188448869 - L1M LINE L1 -2651 5344 5257 212 120 87 22 chr2 64808372 64808464 -188448119 + (TA)n Simple_repeat Simple_repeat 2 99 0 741 167 0 0 chr2 64808889 64809009 -188447574 + Tigger2 DNA MER2_type 1 120 -2598 2230 129 26 42 chr2 64809011 64809151 -188447432 + Tigger2 DNA MER2_type 2345 2486 -232 2138 108 58 0 chr2 64809151 64809446 -188447137 - AluSx SINE Alu 0 312 1 2230 129 26 42 chr2 64809446 64809685 -188446898 + Tigger2 DNA MER2_type 2486 2718 0 1658 181 0 21 chr2 64809826 64810113 -188446470 - AluJo SINE Alu -31 281 1 478 271 96 20 chr2 64810331 64810530 -188446053 - MIR SINE MIR -46 216 3 1322 265 101 20 chr2 64810559 64810955 -188445628 + MER69 DNA AcHobo 2 429 -2097 1830 128 0 0 chr2 64811000 64811243 -188445340 + AluSx SINE Alu 38 280 -32 201 315 109 0 chr2 64811732 64811824 -188444759 - MIR SINE MIR -88 120 19 370 170 100 10 chr2 64812066 64812166 -188444417 - MER112 DNA MER1_type 0 260 152 24 0 0 0 chr2 64812234 64812258 -188444325 + AT_rich Low_complexity Low_complexity 1 24 0 2507 64 0 0 chr2 64812310 64812608 -188443975 + AluY SINE Alu 1 298 -13 1179 175 9 108 chr2 64813410 64813578 -188443005 - AluJo SINE Alu -2 300 180 207 0 0 0 chr2 64813578 64813601 -188442982 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1179 175 9 108 chr2 64813601 64813764 -188442819 - AluJo SINE Alu -122 180 2 2259 115 0 6 chr2 64813776 64814090 -188442493 - AluSx SINE Alu 0 312 1 500 0 17 0 chr2 64814474 64814534 -188442049 + (TTTTA)n Simple_repeat Simple_repeat 2 62 0 1820 133 68 0 chr2 64814537 64814800 -188441783 - AluSx SINE Alu -31 281 1 782 160 8 8 chr2 64814968 64815099 -188441484 + FLAM_C SINE Alu 3 133 -10 256 163 61 20 chr2 64815196 64815294 -188441289 + (TA)n Simple_repeat Simple_repeat 1 102 0 1637 195 0 24 chr2 64815294 64815586 -188440997 - AluJb SINE Alu -27 285 1 438 242 76 15 chr2 64815918 64816050 -188440533 + MIR SINE MIR 56 195 -67 2497 57 7 0 chr2 64816101 64816397 -188440186 + AluY SINE Alu 1 298 -13 702 265 12 44 chr2 64817924 64818173 -188438410 - L1MC4a LINE L1 -1092 6716 6476 1403 296 16 8 chr2 64818579 64818958 -188437625 - MLT1K LTR MaLR -197 391 10 902 131 150 6 chr2 64820045 64820205 -188436378 + MSTA LTR MaLR 1 183 -245 813 133 8 16 chr2 64820210 64820338 -188436245 - FLAM_C SINE Alu -13 130 4 1567 82 116 9 chr2 64820338 64820571 -188436012 + MSTA LTR MaLR 171 428 0 288 345 116 62 chr2 64821446 64821776 -188434807 + L2 LINE L2 1335 1699 -1615 2225 91 14 0 chr2 64821776 64822084 -188434499 - AluSq SINE Alu 0 312 1 288 345 116 62 chr2 64822084 64822200 -188434383 + L2 LINE L2 1699 1807 -1507 1000 237 62 69 chr2 64822216 64822634 -188433949 + MLT1J LTR MaLR 22 436 -75 521 294 85 3 chr2 64822703 64822985 -188433598 + L2 LINE L2 1798 2102 -1212 505 315 101 62 chr2 64822960 64823366 -188433217 + L2 LINE L2 2851 3272 0 * 231 316 0 0 chr2 64823741 64823820 -188432763 + L2 LINE L2 2537 2615 -699 1699 167 7 24 chr2 64824116 64824409 -188432174 + AluJo SINE Alu 2 289 -23 2085 115 3 7 chr2 64824417 64824712 -188431871 + AluSx SINE Alu 1 294 -18 222 338 134 7 chr2 64825071 64825213 -188431370 - MIR SINE MIR -101 161 2 2414 96 3 6 chr2 64825726 64826039 -188430544 + AluSp SINE Alu 1 312 -1 495 0 0 0 chr2 64827062 64827117 -188429466 + (CAATA)n Simple_repeat Simple_repeat 2 56 0 199 200 0 44 chr2 64827136 64827181 -188429402 - MIR SINE MIR -2 260 218 * 209 245 20 0 chr2 64827150 64827199 -188429384 - L2 LINE L2 -20 3293 3244 1578 91 5 0 chr2 64827317 64827514 -188429069 - AluSg/x SINE Alu -17 295 98 2059 129 0 31 chr2 64828311 64828628 -188427955 - AluSg SINE Alu -3 307 1 561 152 54 0 chr2 64828628 64828720 -188427863 + Tigger5 DNA MER2_type 2227 2323 0 618 289 69 31 chr2 64828723 64829170 -188427413 - L1ME4a LINE L1 -24 6097 5634 2228 118 0 0 chr2 64829210 64829514 -188427069 - AluSx SINE Alu -8 304 1 431 212 183 0 chr2 64829635 64829772 -188426811 - L1ME3A LINE L1 -13 6157 5996 705 295 5 9 chr2 64829846 64830056 -188426527 + LTR16B LTR ERVL 244 452 -12 2398 88 3 0 chr2 64830312 64830607 -188425976 - AluSp SINE Alu -17 296 1 1910 98 42 14 chr2 64830760 64831047 -188425536 - AluSx SINE Alu -2 310 16 283 268 98 0 chr2 64831898 64832014 -188424569 - MIR SINE MIR -64 144 36 198 0 0 0 chr2 64832370 64832392 -188424191 + (T)n Simple_repeat Simple_repeat 1 22 0 1903 85 0 0 chr2 64832406 64832641 -188423942 - AluSg SINE Alu -75 235 1 310 51 0 0 chr2 64834958 64834997 -188421586 - AluSg/x SINE Alu -112 190 152 597 76 0 0 chr2 64834998 64835077 -188421506 + AluSg/x SINE Alu 202 280 -29 2651 203 65 0 chr2 64835099 64835684 -188420899 + MER63C DNA MER1_type 90 712 -218 2123 119 14 3 chr2 64835755 64836048 -188420535 - AluSq SINE Alu -17 296 1 226 83 56 0 chr2 64836206 64836242 -188420341 + L1M4 LINE L1 5546 5583 -601 516 203 119 10 chr2 64836645 64836818 -188419765 + L1M4 LINE L1 5495 5691 -479 2814 91 74 6 chr2 64837023 64837478 -188419105 - MER1A DNA MER1_type 0 529 1 431 264 43 14 chr2 64837804 64837944 -188418639 + HERV16 LTR ERVL 687 830 -4166 1056 309 40 5 chr2 64838084 64838463 -188418120 + HERV16 LTR ERVL 4104 4495 -1159 780 155 8 8 chr2 64838465 64838594 -188417989 + MLT1A1 LTR MaLR 1 129 -236 394 233 43 54 chr2 64838624 64838795 -188417788 + LTR16B LTR ERVL 15 190 -260 279 0 0 0 chr2 64838970 64839001 -188417582 + (TTG)n Simple_repeat Simple_repeat 2 32 0 2324 99 3 0 chr2 64839162 64839455 -188417128 + AluSp SINE Alu 1 294 -19 368 278 0 38 chr2 64839670 64839803 -188416780 - MIR SINE MIR -18 244 117 1739 146 0 79 chr2 64840327 64840657 -188415926 + AluJb SINE Alu 1 304 -8 1523 146 50 50 chr2 64840748 64841021 -188415562 - Charlie5 DNA MER1_type -8 2616 2341 2217 108 14 0 chr2 64841021 64841317 -188415266 + AluSx SINE Alu 1 300 -12 1523 146 50 50 chr2 64841317 64841426 -188415157 - Charlie5 DNA MER1_type -282 2342 2234 651 220 50 0 chr2 64841434 64841593 -188414990 - MER3 DNA MER1_type -87 122 3 411 301 29 15 chr2 64841752 64841888 -188414695 + MIR SINE MIR 8 145 -117 2287 112 0 3 chr2 64842727 64843039 -188413544 + AluSx SINE Alu 1 311 -1 229 312 85 21 chr2 64843232 64843373 -188413210 - L2 LINE L2 -208 3064 2915 425 316 200 30 chr2 64843476 64844129 -188412454 - L2 LINE L2 -560 2754 1923 213 65 0 0 chr2 64844129 64844160 -188412423 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 425 316 200 30 chr2 64844160 64844352 -188412231 - L2 LINE L2 -1391 1923 1765 187 272 74 49 chr2 64844365 64844446 -188412137 + MIR SINE MIR 180 262 0 1648 89 0 9 chr2 64844473 64844711 -188411872 + AluY SINE Alu 85 311 0 2380 79 0 3 chr2 64845223 64845514 -188411069 + AluSx SINE Alu 14 303 -9 431 258 58 0 chr2 64845877 64846032 -188410551 - HAL1 LINE L1 -115 2392 2229 227 282 28 0 chr2 64846123 64846194 -188410389 - HAL1b LINE L1 -437 911 839 204 67 0 0 chr2 64846202 64846232 -188410351 + (GTTTG)n Simple_repeat Simple_repeat 2 31 0 221 289 0 0 chr2 64846479 64846531 -188410052 + C-rich Low_complexity Low_complexity 1 52 0 276 130 0 0 chr2 64846796 64846842 -188409741 + (TG)n Simple_repeat Simple_repeat 1 46 0 2595 67 9 3 chr2 64846842 64847183 -188409400 - L1PA7 LINE L1 -6 6148 5806 1853 136 7 10 chr2 64847208 64847502 -188409081 - AluSx SINE Alu -19 293 1 1415 119 41 9 chr2 64847758 64847976 -188408607 + AluSx SINE Alu 2 226 -86 384 318 60 10 chr2 64848007 64848208 -188408375 + L2 LINE L2 2543 2753 -561 955 157 13 0 chr2 64848208 64848361 -188408222 + FRAM SINE Alu 5 159 -17 451 179 18 11 chr2 64848361 64848536 -188408047 + GA-rich Low_complexity Low_complexity 1 176 0 267 280 84 19 chr2 64848885 64848992 -188407591 + L2 LINE L2 3138 3251 -21 2447 66 13 25 chr2 64849004 64849321 -188407262 + AluSp SINE Alu 1 313 0 1233 92 174 0 chr2 64849344 64849540 -188407043 + L1PA10 LINE L1 5939 6168 0 956 128 8 0 chr2 64849753 64849886 -188406697 + AluJo SINE Alu 1 134 -178 2406 46 0 7 chr2 64850039 64850351 -188406232 + AluY SINE Alu 1 310 0 2722 93 5 8 chr2 64850408 64850784 -188405799 + THE1C LTR MaLR 1 375 0 1788 148 35 66 chr2 64851338 64851715 -188404868 + MLT1A1 LTR MaLR 1 365 0 897 188 111 117 chr2 64851841 64852182 -188404401 + MLT1D LTR MaLR 1 339 -166 654 177 0 9 chr2 64852182 64852295 -188404288 + AluJb SINE Alu 1 112 -200 1644 123 0 0 chr2 64852295 64852542 -188404041 + AluSg SINE Alu 61 307 0 288 0 0 0 chr2 64852648 64852680 -188403903 + (TA)n Simple_repeat Simple_repeat 2 33 0 703 258 137 41 chr2 64853237 64853703 -188402880 - MLT1J LTR MaLR 0 511 1 1957 135 35 3 chr2 64853747 64854035 -188402548 - AluSx SINE Alu -15 297 1 1240 164 129 21 chr2 64854374 64854534 -188402049 - AluJb SINE Alu -2 310 169 180 0 0 0 chr2 64854534 64854554 -188402029 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1240 164 129 21 chr2 64854554 64854673 -188401910 - AluJb SINE Alu -143 169 1 685 174 25 0 chr2 64854692 64854813 -188401770 + L1MB7 LINE L1 5689 5812 -362 290 258 0 81 chr2 64855375 64855499 -188401084 + A-rich Low_complexity Low_complexity 1 114 0 2365 93 10 6 chr2 64857464 64857775 -188398808 + AluSq SINE Alu 2 313 0 1614 175 16 10 chr2 64857876 64858184 -188398399 + L1MB7 LINE L1 5814 6123 -61 1953 145 0 23 chr2 64858226 64858530 -188398053 + AluSx SINE Alu 1 297 -15 2455 180 80 39 chr2 64858538 64858652 -188397931 - L1M4 LINE L1 -4831 1711 1603 1942 110 7 66 chr2 64858652 64858981 -188397602 + AluSq SINE Alu 1 311 0 2455 180 80 39 chr2 64858981 64859514 -188397069 - L1M4 LINE L1 -4939 1603 1035 324 214 179 18 chr2 64859561 64859673 -188396910 + MLT1D LTR MaLR 420 549 0 535 270 21 48 chr2 64859741 64859930 -188396653 + LTR16A1 LTR ERVL 219 402 -55 685 156 16 31 chr2 64860008 64860136 -188396447 + AluJo SINE Alu 5 130 -172 2765 140 19 28 chr2 64860136 64860203 -188396380 + ERVL LTR ERVL 4552 4618 -1146 2265 92 0 0 chr2 64860203 64860484 -188396099 - AluSc SINE Alu -13 296 16 2765 140 19 28 chr2 64860484 64860881 -188395702 + ERVL LTR ERVL 4618 5012 -752 387 0 0 0 chr2 64861451 64861494 -188395089 + (TG)n Simple_repeat Simple_repeat 2 44 0 2157 116 17 0 chr2 64861832 64862126 -188394457 - AluSg SINE Alu -11 299 1 814 218 32 0 chr2 64862301 64862457 -188394126 + AluJo SINE Alu 137 297 -15 1965 131 27 10 chr2 64862457 64862754 -188393829 + AluJo SINE Alu 1 302 -10 2226 102 3 3 chr2 64863037 64863331 -188393252 + AluSx SINE Alu 3 296 -16 21 0 0 0 chr2 64863375 64863396 -188393187 + AT_rich Low_complexity Low_complexity 1 21 0 370 255 137 0 chr2 64863396 64863600 -188392983 + L1ME4a LINE L1 5688 5919 -202 600 88 0 0 chr2 64863848 64863928 -188392655 + AluS SINE Alu 3 82 -230 1735 161 0 61 chr2 64864243 64864554 -188392029 + AluJo SINE Alu 1 292 -20 2042 92 60 3 chr2 64865240 64865524 -188391059 + AluSq SINE Alu 1 300 -13 1988 122 3 53 chr2 64865690 64866011 -188390572 + AluJb SINE Alu 1 305 -7 432 291 161 9 chr2 64866727 64866950 -188389633 - MIR SINE MIR -4 258 2 527 220 252 28 chr2 64867169 64867383 -188389200 + MIR SINE MIR 1 262 0 21 0 0 0 chr2 64867728 64867749 -188388834 + AT_rich Low_complexity Low_complexity 1 21 0 351 230 71 18 chr2 64868416 64868529 -188388054 + Tigger8 DNA MER2_type 283 401 -265 728 200 7 41 chr2 64868564 64868709 -188387874 + FAM SINE Alu 20 159 -26 533 156 84 32 chr2 64869480 64869637 -188386946 - MER41-int LTR ERV1 -3229 2717 851 2399 73 0 29 chr2 64869656 64869971 -188386612 - AluSc SINE Alu -3 306 1 2225 93 14 0 chr2 64870116 64870405 -188386178 - AluSp SINE Alu -20 293 1 1906 148 30 7 chr2 64870632 64870930 -188385653 - AluSg SINE Alu -5 305 1 310 255 97 76 chr2 64871010 64871155 -188385428 + MIR SINE MIR 31 178 -84 905 135 8 0 chr2 64871268 64871401 -188385182 + AluJo SINE Alu 1 134 -178 2393 94 0 3 chr2 64871402 64871711 -188384872 + AluSq SINE Alu 1 308 -5 827 144 12 19 chr2 64872325 64872485 -188384098 - AluY SINE Alu -14 297 139 789 165 4 0 chr2 64872485 64872756 -188383827 + C-rich Low_complexity Low_complexity 1 272 0 940 87 24 0 chr2 64872856 64872982 -188383601 - AluY SINE Alu -182 129 1 26 82 0 0 chr2 64873208 64873269 -188383314 + AT_rich Low_complexity Low_complexity 1 61 0 22 35 0 0 chr2 64873570 64873599 -188382984 + AT_rich Low_complexity Low_complexity 1 29 0 578 230 63 11 chr2 64873751 64873925 -188382658 + MIR SINE MIR 66 248 -14 2149 114 0 20 chr2 64874290 64874596 -188381987 + AluSx SINE Alu 1 300 -12 1647 157 21 11 chr2 64874675 64874990 -188381593 - AluSx SINE Alu 0 318 1 2311 90 10 0 chr2 64875330 64875630 -188380953 - AluY SINE Alu -8 303 1 1626 169 3 11 chr2 64875630 64875913 -188380670 + AluJo SINE Alu 14 294 -18 26 0 0 0 chr2 64876020 64876046 -188380537 + AT_rich Low_complexity Low_complexity 1 26 0 1944 119 0 0 chr2 64876084 64876353 -188380230 + AluSx SINE Alu 37 305 -7 825 178 0 0 chr2 64876432 64876561 -188380022 + AluJb SINE Alu 1 129 -183 364 264 116 8 chr2 64876618 64876739 -188379844 - MER69 DNA AcHobo -952 274 141 1370 179 4 36 chr2 64876751 64877030 -188379553 + AluJo SINE Alu 41 310 -2 477 253 0 0 chr2 64877032 64877123 -188379460 - MER69 DNA AcHobo -2392 134 44 218 344 31 10 chr2 64877461 64877557 -188379026 + MIR SINE MIR 67 164 -98 380 219 12 0 chr2 64877740 64877822 -188378761 - MER69 DNA AcHobo -2443 83 1 535 248 80 0 chr2 64877922 64878059 -188378524 + MER5B DNA MER1_type 24 171 -7 405 276 112 12 chr2 64878078 64878248 -188378335 - MIR SINE MIR -55 207 21 1519 141 0 42 chr2 64878420 64878683 -188377900 + AluJb SINE Alu 61 312 0 950 294 149 7 chr2 64878929 64879372 -188377211 - HAL1 LINE L1 -745 1762 1257 2233 112 3 0 chr2 64879373 64879676 -188376907 - AluSx SINE Alu -8 304 1 405 0 0 0 chr2 64879941 64879986 -188376597 + (TG)n Simple_repeat Simple_repeat 2 46 0 828 134 0 70 chr2 64880074 64880216 -188376367 + FLAM_C SINE Alu 1 132 -1 357 62 0 0 chr2 64880225 64880273 -188376310 + (GAA)n Simple_repeat Simple_repeat 1 48 0 1920 78 43 62 chr2 64880292 64880515 -188376068 + L1P4 LINE L1 5264 5481 -682 2268 96 7 0 chr2 64880515 64880806 -188375777 + AluSx SINE Alu 1 293 -19 1920 78 43 62 chr2 64880806 64880904 -188375679 + L1P4 LINE L1 5481 5579 -584 518 108 0 65 chr2 64880904 64880971 -188375612 + AluSg/x SINE Alu 219 289 -23 4778 86 10 38 chr2 64880971 64881605 -188374978 + L1PA13 LINE L1 5476 6126 -37 1700 139 12 4 chr2 64881605 64881864 -188374719 + AluSx SINE Alu 25 285 -27 261 0 0 0 chr2 64881864 64881893 -188374690 + (CA)n Simple_repeat Simple_repeat 2 30 0 4778 86 10 38 chr2 64881893 64881963 -188374620 + L1PA13 LINE L1 6124 6161 -2 518 108 0 65 chr2 64881963 64881988 -188374595 + AluSg/x SINE Alu 289 305 -7 1793 181 0 0 chr2 64882067 64882379 -188374204 - AluJo SINE Alu 0 312 1 519 213 40 111 chr2 64882593 64882818 -188373765 + MLT1K LTR MaLR 380 588 0 867 226 33 9 chr2 64883203 64883415 -188373168 + MIR SINE MIR 2 218 -44 411 280 116 21 chr2 64883699 64883888 -188372695 + MIR SINE MIR 50 256 -6 2302 99 0 3 chr2 64884049 64884342 -188372241 + AluSx SINE Alu 1 292 -20 202 241 0 17 chr2 64884515 64884573 -188372010 - L2 LINE L2 -1 3312 3256 667 253 37 126 chr2 64884681 64885271 -188371312 - L2 LINE L2 0 3313 2777 25 0 0 0 chr2 64885274 64885299 -188371284 + AT_rich Low_complexity Low_complexity 1 25 0 1858 36 0 0 chr2 64885466 64885689 -188370894 - L1PA13 LINE L1 0 6163 5941 2234 120 0 83 chr2 64885690 64885746 -188370837 - MER47A DNA MER2_type -1957 366 307 2476 75 0 28 chr2 64885746 64886066 -188370517 + AluY SINE Alu 1 311 0 2234 120 0 83 chr2 64886066 64886408 -188370175 - MER47A DNA MER2_type -2016 307 1 2251 105 0 7 chr2 64886699 64887003 -188369580 + AluSg SINE Alu 1 302 -8 2163 120 3 0 chr2 64887006 64887289 -188369294 + AluSc SINE Alu 1 284 -25 1753 189 68 31 chr2 64887778 64888160 -188368423 - MSTD LTR MaLR 0 396 1 359 217 118 81 chr2 64888270 64888431 -188368152 - MIR SINE MIR -50 212 46 188 343 61 0 chr2 64888762 64888861 -188367722 + L2 LINE L2 3122 3226 -46 289 209 88 44 chr2 64888941 64889032 -188367551 + MER21B LTR ERV1 12 106 -757 2225 109 7 0 chr2 64889039 64889332 -188367251 - AluSx SINE Alu -17 295 1 3091 257 61 23 chr2 64889332 64889521 -188367062 + L2 LINE L2 1789 1969 -1345 2064 96 0 93 chr2 64889521 64889844 -188366739 - AluY SINE Alu -18 293 1 3091 257 61 23 chr2 64889844 64890101 -188366482 + L2 LINE L2 1969 2215 -1099 1795 173 13 70 chr2 64890101 64890488 -188366095 - MLT1A1 LTR MaLR 0 365 1 3091 257 61 23 chr2 64890488 64891155 -188365428 + L2 LINE L2 2215 2945 -369 1672 132 9 71 chr2 64891347 64891489 -188365094 - L1MD1 LINE L1 -15 6227 6078 2597 35 10 13 chr2 64891489 64891799 -188364784 + AluY SINE Alu 1 309 -2 1672 132 9 71 chr2 64891799 64891982 -188364601 - L1MD1 LINE L1 -164 6078 5922 2202 120 3 0 chr2 64891985 64892293 -188364290 + AluSx SINE Alu 4 312 0 788 175 0 0 chr2 64892308 64892445 -188364138 - MER5A DNA MER1_type -52 137 1 373 200 24 24 chr2 64892601 64892686 -188363897 + L2 LINE L2 3188 3272 0 225 0 0 0 chr2 64892956 64892981 -188363602 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2168 120 3 0 chr2 64893053 64893345 -188363238 + AluSq SINE Alu 2 294 -19 1236 226 30 21 chr2 64893470 64893798 -188362785 + MER46C DNA MER2_type 2 332 -6 2195 106 0 0 chr2 64894476 64894822 -188361761 - AluSx SINE Alu 0 346 1 541 248 0 81 chr2 64895316 64895404 -188361179 + MIR SINE MIR 20 93 -169 2298 84 3 3 chr2 64895404 64895701 -188360882 - AluY SINE Alu -14 297 1 541 248 0 81 chr2 64895701 64895761 -188360822 + MIR SINE MIR 93 156 -106 2414 76 3 17 chr2 64895886 64896188 -188360395 - AluSp SINE Alu -15 298 1 915 104 129 25 chr2 64896548 64896711 -188359872 + MER2 DNA MER2_type 1 180 -165 282 107 18 0 chr2 64896720 64896770 -188359813 - Alu SINE Alu -265 37 2 797 283 138 34 chr2 64897028 64897542 -188359041 + L1ME4a LINE L1 5256 5823 -298 693 161 59 0 chr2 64897548 64897666 -188358917 + FLAM_C SINE Alu 1 125 -8 192 97 0 0 chr2 64897666 64897697 -188358886 + (TA)n Simple_repeat Simple_repeat 2 32 0 2481 66 7 0 chr2 64899071 64899376 -188357207 - AluSx SINE Alu -5 307 1 278 245 75 0 chr2 64899585 64899679 -188356904 - L1ME4a LINE L1 -56 6065 5965 265 220 92 37 chr2 64899739 64899848 -188356735 + L1ME4a LINE L1 6003 6117 -4 2246 104 0 3 chr2 64899857 64900154 -188356429 - AluSg SINE Alu -14 296 1 234 259 199 76 chr2 64900288 64900504 -188356079 + HAL1 LINE L1 3 272 -2235 2059 134 3 10 chr2 64900504 64900809 -188355774 + AluJb SINE Alu 1 303 -9 234 259 199 76 chr2 64900809 64900908 -188355675 + HAL1 LINE L1 272 357 -2150 2051 125 14 0 chr2 64900908 64901189 -188355394 + AluSx SINE Alu 1 285 -27 882 197 53 76 chr2 64901211 64901378 -188355205 - MLT1A2 LTR MaLR -68 306 146 2390 89 16 0 chr2 64901378 64901682 -188354901 + AluY SINE Alu 1 309 -2 882 197 53 76 chr2 64901682 64901778 -188354805 - MLT1A2 LTR MaLR -228 146 49 34 0 0 0 chr2 64901834 64901868 -188354715 + AT_rich Low_complexity Low_complexity 1 34 0 2345 94 7 3 chr2 64901868 64902177 -188354406 - AluY SINE Alu 0 311 2 2102 113 3 10 chr2 64902178 64902470 -188354113 - AluSq SINE Alu -18 295 6 1720 180 78 9 chr2 64902482 64902804 -188353779 - MSTB1 LTR MaLR -85 347 4 1173 161 96 8 chr2 64903529 64903778 -188352805 + L1MC3 LINE L1 7324 7594 -191 946 144 67 0 chr2 64903778 64903958 -188352625 + L1MC2 LINE L1 6137 6328 -16 1991 149 0 0 chr2 64903958 64904246 -188352337 + AluSx SINE Alu 1 288 -24 27 61 0 15 chr2 64904246 64904271 -188352312 + AT_rich Low_complexity Low_complexity 1 25 -40 822 167 0 0 chr2 64904271 64904397 -188352186 + FLAM_A SINE Alu 1 126 -7 27 61 0 15 chr2 64904397 64904437 -188352146 + AT_rich Low_complexity Low_complexity 25 65 0 2055 148 0 0 chr2 64905384 64905694 -188350889 - AluSx SINE Alu -2 310 1 46 54 0 0 chr2 64905807 64905881 -188350702 + AT_rich Low_complexity Low_complexity 1 74 0 603 256 65 11 chr2 64906190 64906436 -188350147 - MLT1I LTR MaLR -9 400 64 365 286 19 0 chr2 64907210 64907315 -188349268 + MER81 DNA DNA 4 110 -4 2240 172 51 17 chr2 64907474 64907887 -188348696 - MSTA LTR MaLR -1 427 1 2330 78 7 0 chr2 64907920 64908213 -188348370 + AluSx SINE Alu 1 295 -17 257 313 8 31 chr2 64908217 64908345 -188348238 + MLT1K LTR MaLR 454 578 -10 1372 231 74 60 chr2 64908359 64908862 -188347721 + MLT1J LTR MaLR 1 510 -1 1935 152 3 3 chr2 64908904 64909193 -188347390 - AluJb SINE Alu -23 289 1 2312 91 3 0 chr2 64909225 64909510 -188347073 - AluSp SINE Alu -27 286 1 26 0 0 0 chr2 64909803 64909829 -188346754 + AT_rich Low_complexity Low_complexity 1 26 0 1969 141 24 0 chr2 64910549 64910846 -188345737 + AluJb SINE Alu 1 304 -8 1635 221 58 83 chr2 64911072 64911462 -188345121 + L1MDb LINE L1 777 1145 -5264 2338 116 0 3 chr2 64911462 64911773 -188344810 - AluSq SINE Alu -3 310 1 1635 221 58 83 chr2 64911773 64912043 -188344540 + L1MDb LINE L1 1145 1420 -4989 1842 124 0 0 chr2 64912066 64912308 -188344275 + AluSx SINE Alu 1 242 -70 2328 154 53 26 chr2 64912308 64912724 -188343859 + LTR3 LTR ERVK 1 427 -5 423 79 32 0 chr2 64912738 64912801 -188343782 + AluSx SINE Alu 239 303 -8 5625 208 95 52 chr2 64912805 64912963 -188343620 + L1MDb LINE L1 1432 1582 -4824 1209 173 105 58 chr2 64912963 64913240 -188343343 - AluJo SINE Alu -22 290 1 5625 208 95 52 chr2 64913240 64913576 -188343007 + L1MDb LINE L1 1582 1902 -4504 1921 133 49 0 chr2 64913576 64913861 -188342722 + AluSx SINE Alu 1 299 -13 5625 208 95 52 chr2 64913861 64914198 -188342385 + L1MDb LINE L1 1902 2223 -4183 2208 114 3 0 chr2 64914198 64914488 -188342095 + AluSq SINE Alu 1 291 -22 5625 208 95 52 chr2 64914488 64915482 -188341101 + L1MDb LINE L1 2223 3172 -3234 1899 153 0 3 chr2 64915482 64915797 -188340786 + AluJb SINE Alu 1 314 0 5625 208 95 52 chr2 64915797 64916201 -188340382 + L1MDb LINE L1 3172 3557 -2849 2493 150 10 0 chr2 64916201 64916600 -188339983 - MER57A LTR ERV1 0 403 1 5625 208 95 52 chr2 64916600 64916859 -188339724 + L1MDb LINE L1 3557 3803 -2603 2367 109 0 0 chr2 64916859 64917170 -188339413 + AluSq SINE Alu 1 311 -2 5625 208 95 52 chr2 64917170 64917703 -188338880 + L1MDb LINE L1 3803 4598 -1808 21 0 0 0 chr2 64917703 64917724 -188338859 + AT_rich Low_complexity Low_complexity 1 21 0 1773 164 0 0 chr2 64917741 64918016 -188338567 - AluJo SINE Alu -23 289 15 451 101 43 0 chr2 64918016 64918085 -188338498 + AluJo SINE Alu 65 136 -176 1561 108 0 9 chr2 64918295 64918517 -188338066 + AluSp SINE Alu 79 298 -15 529 58 0 0 chr2 64918947 64919016 -188337567 - MER41B LTR ERV1 -85 550 482 2335 81 0 66 chr2 64919027 64919359 -188337224 - AluSx SINE Alu -2 310 1 244 146 36 0 chr2 64919753 64919808 -188336775 + L1P LINE L1 5353 5409 -745 1995 160 0 3 chr2 64920488 64920794 -188335789 + AluJb SINE Alu 8 312 0 446 244 46 56 chr2 64920938 64921135 -188335448 - L1ME LINE L1 -361 5760 5566 208 300 0 0 chr2 64921180 64921230 -188335353 + L2 LINE L2 3207 3256 -16 1747 152 13 33 chr2 64921422 64921724 -188334859 + AluJb SINE Alu 1 296 -16 1104 151 24 0 chr2 64922194 64922360 -188334223 - AluSg/x SINE Alu -23 289 120 2469 85 0 22 chr2 64922365 64922682 -188333901 - AluSg SINE Alu 0 310 1 254 158 0 0 chr2 64923237 64923275 -188333308 + MER57A LTR ERV1 300 337 -66 195 315 81 9 chr2 64923468 64923579 -188333004 + L2 LINE L2 2554 2672 -642 1090 204 67 41 chr2 64923606 64923763 -188332820 - AluJo SINE Alu -16 296 128 267 103 0 0 chr2 64923763 64923802 -188332781 + (TA)n Simple_repeat Simple_repeat 2 40 0 1090 204 67 41 chr2 64923802 64923913 -188332670 - AluJo SINE Alu -184 128 21 718 213 56 6 chr2 64924353 64924513 -188332070 - FAM SINE Alu -6 169 2 2072 128 17 3 chr2 64924524 64924820 -188331763 - AluSg SINE Alu -10 300 1 1857 148 10 20 chr2 64924825 64925129 -188331454 - AluJo SINE Alu -11 301 1 1318 86 11 38 chr2 64925210 64925396 -188331187 + AluSg SINE Alu 1 181 -129 1394 87 73 18 chr2 64925679 64925897 -188330686 + MER30 DNA MER1_type 1 230 0 2008 122 0 50 chr2 64925909 64926229 -188330354 - AluSq SINE Alu -9 304 1 828 162 104 12 chr2 64926244 64926417 -188330166 - MLT2B1 LTR ERVL -315 205 17 2656 186 36 28 chr2 64926421 64926464 -188330119 - ERVL LTR ERVL 0 5654 5613 2317 89 3 3 chr2 64926464 64926766 -188329817 - AluY SINE Alu -9 302 1 2656 186 36 28 chr2 64926766 64927470 -188329113 - ERVL LTR ERVL -41 5613 4920 2081 122 10 3 chr2 64927681 64927975 -188328608 + AluSq SINE Alu 1 296 -17 2317 94 19 7 chr2 64928017 64928326 -188328257 - AluSq SINE Alu 0 313 1 180 296 56 0 chr2 64929211 64929265 -188327318 - L2 LINE L2 -31 3241 3185 1478 132 13 0 chr2 64929268 64929496 -188327087 + LTR39 LTR ERV1 1 231 -552 2149 135 3 0 chr2 64929999 64930303 -188326280 + AluSg SINE Alu 1 305 -5 237 121 0 0 chr2 64930305 64930338 -188326245 + AluSx SINE Alu 1 33 -269 4295 66 0 7 chr2 64930339 64930882 -188325701 - MER41A LTR ERV1 0 554 16 1799 146 0 0 chr2 64930885 64931146 -188325437 + AluSx SINE Alu 18 278 -34 1058 85 23 11 chr2 64931148 64931325 -188325258 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 3408 140 30 36 chr2 64931346 64931752 -188324831 + LTR39 LTR ERV1 211 613 -170 1831 124 0 0 chr2 64931752 64932011 -188324572 + AluSx SINE Alu 46 304 -8 3408 140 30 36 chr2 64932011 64932181 -188324402 + LTR39 LTR ERV1 613 783 0 294 319 51 19 chr2 64932243 64932400 -188324183 + MARNA DNA Mariner 174 335 -251 1961 155 0 19 chr2 64932409 64932718 -188323865 + AluSx SINE Alu 1 303 -9 2624 64 0 0 chr2 64933157 64933468 -188323115 - AluY SINE Alu 0 311 1 242 265 20 71 chr2 64934079 64934110 -188322473 - Charlie8 DNA MER1_type -103 227 196 2086 143 0 3 chr2 64934110 64934417 -188322166 - AluJb SINE Alu -6 306 1 242 265 20 71 chr2 64934417 64934483 -188322100 - Charlie8 DNA MER1_type -134 196 135 434 206 28 0 chr2 64934486 64934593 -188321990 - LTR16C LTR ERVL 0 491 382 2212 114 0 0 chr2 64934751 64935048 -188321535 - AluY SINE Alu -14 297 1 2126 98 14 0 chr2 64935358 64935643 -188320940 - AluSx SINE Alu -20 292 4 950 257 74 12 chr2 64935650 64935988 -188320595 + L2 LINE L2 1991 2349 -965 772 258 37 109 chr2 64936018 64936092 -188320491 - LTR16C LTR ERVL -3 488 410 1460 226 51 85 chr2 64936092 64936657 -188319926 + MLT1H LTR MaLR 4 549 0 772 258 37 109 chr2 64936657 64936925 -188319658 - LTR16C LTR ERVL -81 410 181 2405 100 0 3 chr2 64936925 64937234 -188319349 - AluSp SINE Alu -5 308 1 772 258 37 109 chr2 64937234 64937321 -188319262 - LTR16C LTR ERVL -310 181 89 893 252 216 7 chr2 64937455 64937674 -188318909 + L2 LINE L2 2395 2567 -746 1921 157 13 17 chr2 64937674 64937838 -188318745 - AluJo SINE Alu -14 298 135 188 33 0 33 chr2 64937838 64937868 -188318715 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 2009 129 4 0 chr2 64937868 64938147 -188318436 - AluSx SINE Alu -32 280 1 1921 157 13 17 chr2 64938147 64938280 -188318303 - AluJo SINE Alu -175 137 1 893 252 216 7 chr2 64938280 64938783 -188317800 + L2 LINE L2 2567 3259 -54 2344 111 0 0 chr2 64938916 64939223 -188317360 + AluSq SINE Alu 3 309 -4 2364 66 24 0 chr2 64939262 64939551 -188317032 + AluY SINE Alu 1 296 -15 1759 139 23 58 chr2 64939646 64939778 -188316805 + AluJo SINE Alu 13 148 -164 1752 135 0 26 chr2 64939778 64940044 -188316539 + AluSg SINE Alu 45 303 -7 1759 139 23 58 chr2 64940044 64940221 -188316362 + AluJo SINE Alu 148 311 -1 262 253 48 0 chr2 64940301 64940384 -188316199 - L2 LINE L2 -2 3270 3184 1332 173 0 0 chr2 64940978 64941180 -188315403 + AluJb SINE Alu 73 274 -38 892 176 36 12 chr2 64941189 64941354 -188315229 + MER49 LTR ERV1 653 821 -102 2376 106 3 0 chr2 64942012 64942323 -188314260 - AluSx SINE Alu 0 312 1 1858 131 19 42 chr2 64942925 64943238 -188313345 - AluJo SINE Alu -6 306 1 1443 225 141 9 chr2 64943494 64944019 -188312564 + Charlie7 DNA MER1_type 77 670 -1942 576 213 16 0 chr2 64944030 64944157 -188312426 + Charlie7 DNA MER1_type 2196 2324 -288 1717 160 35 3 chr2 64944157 64944445 -188312138 + AluJo SINE Alu 1 297 -15 3035 243 41 23 chr2 64944484 64944537 -188312046 + L1MC4 LINE L1 6727 6778 -1264 2210 96 27 0 chr2 64944537 64944829 -188311754 - AluSq SINE Alu -13 300 1 3035 243 41 23 chr2 64944829 64945679 -188310904 + L1MC4 LINE L1 6778 7646 -396 1669 138 8 22 chr2 64945679 64945947 -188310636 + AluJb SINE Alu 30 293 -19 706 214 60 63 chr2 64947048 64947300 -188309283 + L1MC5 LINE L1 7611 7861 -100 2352 95 3 0 chr2 64947519 64947823 -188308760 - AluSg SINE Alu -5 305 1 813 185 0 0 chr2 64948071 64948201 -188308382 - FLAM_C SINE Alu 0 133 4 2200 133 3 0 chr2 64948231 64948540 -188308043 - AluSx SINE Alu -1 311 2 861 124 0 8 chr2 64948621 64948742 -188307841 + FLAM_C SINE Alu 1 120 -13 33 0 0 0 chr2 64948742 64948775 -188307808 + AT_rich Low_complexity Low_complexity 1 33 0 2085 127 3 13 chr2 64949061 64949360 -188307223 - AluSq SINE Alu -15 298 3 405 233 4 7 chr2 64949525 64949764 -188306819 + C-rich Low_complexity Low_complexity 1 287 0 216 0 0 0 chr2 64949872 64949896 -188306687 + (TA)n Simple_repeat Simple_repeat 2 25 0 1689 166 18 4 chr2 64949896 64950173 -188306410 - AluJb SINE Alu -29 283 3 2182 64 0 43 chr2 64950533 64950813 -188305770 - AluY SINE Alu -9 302 35 191 365 0 0 chr2 64951049 64951134 -188305449 - MIR SINE MIR -55 207 123 186 342 40 26 chr2 64951367 64951443 -188305140 - L2 LINE L2 -3 3310 3234 2581 71 0 0 chr2 64952136 64952445 -188304138 - AluY SINE Alu -1 310 2 2677 47 0 0 chr2 64953838 64954139 -188302444 + AluY SINE Alu 1 301 -10 1711 177 26 132 chr2 64954188 64954720 -188301863 + L1ME3A LINE L1 5600 6075 -95 2096 139 3 0 chr2 64954836 64955137 -188301446 - AluJb SINE Alu -10 302 1 224 257 154 103 chr2 64955571 64955707 -188300876 - MIR3 SINE MIR -27 181 39 2464 85 0 10 chr2 64956908 64957214 -188299369 + AluSx SINE Alu 1 303 -9 488 139 13 13 chr2 64957229 64957308 -188299275 - AluJ/FLAM SINE Alu -224 88 10 2207 116 0 10 chr2 64957338 64957640 -188298943 + AluSg SINE Alu 1 299 -11 312 316 220 0 chr2 64958122 64958299 -188298284 + MIR SINE MIR 37 252 -10 650 202 221 42 chr2 64958306 64958471 -188298112 + HAL1 LINE L1 793 927 -1580 1784 179 7 10 chr2 64958471 64958812 -188297771 + AluJb SINE Alu 1 312 0 650 202 221 42 chr2 64958812 64958958 -188297625 + HAL1 LINE L1 927 1160 -1347 548 258 101 94 chr2 64959014 64959070 -188297513 + HAL1 LINE L1 1798 1852 -655 1723 134 61 81 chr2 64959070 64959414 -188297169 + MER1B DNA MER1_type 1 337 0 548 258 101 94 chr2 64959414 64959652 -188296931 + HAL1 LINE L1 1852 2087 -420 2312 102 0 10 chr2 64959652 64959957 -188296626 + AluSg SINE Alu 1 302 -8 548 258 101 94 chr2 64959957 64960215 -188296368 + HAL1 LINE L1 2087 2355 -152 292 164 18 0 chr2 64960201 64960256 -188296327 + L1M4 LINE L1 5434 5489 -695 * 1642 171 25 0 chr2 64960257 64960538 -188296045 + AluJo SINE Alu 1 288 -24 2950 116 9 20 chr2 64960581 64960975 -188295608 + L1PA16 LINE L1 5710 6083 -83 2224 117 0 13 chr2 64960975 64961275 -188295308 - AluSq SINE Alu -16 297 2 2950 116 9 20 chr2 64961275 64961359 -188295224 + L1PA16 LINE L1 6083 6166 0 749 189 0 0 chr2 64962216 64962338 -188294245 - FLAM_A SINE Alu -11 122 1 23 0 0 0 chr2 64963054 64963077 -188293506 + AT_rich Low_complexity Low_complexity 1 23 0 2090 124 7 7 chr2 64963092 64963383 -188293200 - AluSx SINE Alu -21 291 1 1736 174 3 10 chr2 64963389 64963677 -188292906 - AluJo SINE Alu -26 286 1 1674 105 0 0 chr2 64963908 64964117 -188292466 + AluSq SINE Alu 3 211 -102 350 113 0 0 chr2 64964117 64964170 -188292413 + AluSq SINE Alu 250 302 0 2149 102 0 7 chr2 64965274 64965606 -188290977 - AluSg SINE Alu 0 330 1 2175 118 0 7 chr2 64967075 64967372 -188289211 - AluSc SINE Alu -14 295 1 210 329 13 13 chr2 64967459 64967535 -188289048 - MIR3 SINE MIR -23 185 110 281 325 153 35 chr2 64967572 64968061 -188288522 + L2 LINE L2 2686 3242 -30 183 42 0 0 chr2 64969556 64969580 -188287003 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1992 96 65 0 chr2 64969584 64969845 -188286738 - AluSx SINE Alu -30 282 5 22 0 0 0 chr2 64969901 64969923 -188286660 + AT_rich Low_complexity Low_complexity 1 22 0 2350 89 0 0 chr2 64970284 64970576 -188286007 + AluY SINE Alu 1 292 -19 2091 130 3 10 chr2 64970839 64971146 -188285437 + AluSx SINE Alu 1 305 -7 224 281 0 111 chr2 64972026 64972090 -188284493 - L2 LINE L2 -209 3063 2994 1495 132 135 30 chr2 64972090 64972356 -188284227 + AluJb SINE Alu 1 294 -18 2285 117 3 0 chr2 64972356 64972664 -188283919 + AluSx SINE Alu 1 309 -3 224 281 0 111 chr2 64972664 64972751 -188283832 - L2 LINE L2 -276 2996 2928 1195 212 102 0 chr2 64973127 64973420 -188283163 + LTR50 LTR ERVL 1 323 -472 2075 110 67 0 chr2 64973447 64973729 -188282854 + AluSx SINE Alu 1 301 -11 1261 272 15 42 chr2 64973739 64974038 -188282545 + L2 LINE L2 2924 3211 -102 1791 170 10 3 chr2 64974038 64974344 -188282239 + AluJo SINE Alu 2 309 -3 1261 272 15 42 chr2 64974344 64974445 -188282138 + L2 LINE L2 3211 3313 0 244 200 80 0 chr2 64975256 64975331 -188281252 + L1MC/D LINE L1 5815 5895 -1913 396 111 0 0 chr2 64975350 64975422 -188281161 + (TA)n Simple_repeat Simple_repeat 1 72 0 718 213 0 0 chr2 64975611 64975752 -188280831 + FLAM_C SINE Alu 3 143 0 2149 129 7 0 chr2 64975755 64976057 -188280526 + AluSx SINE Alu 1 304 -8 1213 145 219 21 chr2 64976057 64976222 -188280361 + L1PA16 LINE L1 5823 5954 -212 207 0 0 0 chr2 64976222 64976245 -188280338 + (GGGA)n Simple_repeat Simple_repeat 1 23 0 1213 145 219 21 chr2 64976245 64976362 -188280221 + L1PA16 LINE L1 5954 6161 -5 2438 73 3 0 chr2 64976366 64976655 -188279928 + AluSp SINE Alu 1 290 -23 252 200 0 0 chr2 64976655 64976710 -188279873 + (TATG)n Simple_repeat Simple_repeat 2 56 0 1993 152 0 3 chr2 64976721 64977017 -188279566 + AluJb SINE Alu 1 295 -17 231 36 0 0 chr2 65077488 65077516 -188179067 + (CACCC)n Simple_repeat Simple_repeat 4 31 0 1170 190 157 91 chr2 65078719 65079266 -188177317 + LTR8A LTR ERV1 1 583 -144 1456 133 161 20 chr2 65079484 65079739 -188176844 + AluSx SINE Alu 1 291 -11 319 242 75 50 chr2 65080307 65080427 -188176156 - MIR SINE MIR -65 143 21 575 217 11 101 chr2 65081616 65081805 -188174778 - MIR SINE MIR -85 177 6 228 312 65 21 chr2 65082046 65082139 -188174444 - MIR SINE MIR -133 129 33 1740 160 13 16 chr2 65082360 65082667 -188173916 + AluJo SINE Alu 1 306 -6 593 229 24 0 chr2 65084246 65084383 -188172200 + MIR SINE MIR 32 178 -30 988 139 93 16 chr2 65085756 65085950 -188170633 - AluJb SINE Alu -18 294 86 296 248 44 9 chr2 65086195 65086308 -188170275 - LTR41 LTR ERVL -6 767 651 842 143 295 19 chr2 65086768 65087026 -188169557 - LTR41 LTR ERVL -444 329 1 1733 145 7 7 chr2 65087710 65087986 -188168597 - AluJb SINE Alu -32 280 5 2050 110 3 3 chr2 65088287 65088577 -188168006 - AluSx SINE Alu -22 290 1 539 168 20 20 chr2 65089465 65089566 -188167017 - FLAM_A SINE Alu -41 101 1 289 259 104 0 chr2 65089671 65089778 -188166805 - MIR3 SINE MIR -34 174 57 797 116 87 36 chr2 65089912 65090050 -188166533 + AluSg/x SINE Alu 129 273 -37 210 143 0 0 chr2 65090827 65090862 -188165721 + (GGAA)n Simple_repeat Simple_repeat 1 35 0 1924 138 11 52 chr2 65091205 65091554 -188165029 + MER1B DNA MER1_type 1 335 -2 1212 157 5 23 chr2 65091666 65091882 -188164701 + AluSg/x SINE Alu 87 298 -14 627 179 120 0 chr2 65092374 65092491 -188164092 + FLAM_C SINE Alu 1 131 -2 200 322 35 26 chr2 65092698 65092813 -188163770 - MIR SINE MIR -114 148 33 1816 121 4 0 chr2 65095536 65095793 -188160790 + AluSp SINE Alu 34 291 -22 620 263 180 7 chr2 65096863 65097152 -188159431 - L2 LINE L2 -338 2976 2638 221 300 17 0 chr2 65097515 65097575 -188159008 + L2 LINE L2 2999 3059 -254 255 317 59 10 chr2 65098764 65098865 -188157718 - MIR SINE MIR -35 227 122 265 261 116 0 chr2 65098913 65098982 -188157601 - MIR SINE MIR -137 125 49 504 181 107 139 chr2 65098985 65099266 -188157317 + L1ME3 LINE L1 5891 6162 0 2169 107 0 0 chr2 65100590 65100888 -188155695 + AluSg SINE Alu 1 298 -12 391 298 84 37 chr2 65101406 65101597 -188154986 - MIR SINE MIR -3 259 60 235 193 0 60 chr2 65102409 65102492 -188154091 + (CCCCG)n Simple_repeat Simple_repeat 2 79 0 244 223 140 45 chr2 65103870 65104027 -188152556 + L1ME4a LINE L1 5945 6116 -5 2117 87 28 3 chr2 65104089 65104378 -188152205 + AluSg SINE Alu 1 296 -14 2127 96 0 7 chr2 65104755 65105046 -188151537 + AluSx SINE Alu 1 289 -23 529 236 94 0 chr2 65105212 65105339 -188151244 - L2 LINE L2 0 3272 3134 1224 278 172 103 chr2 65105434 65106144 -188150439 - L2 LINE L2 -433 2881 2222 2163 91 30 0 chr2 65106144 65106441 -188150142 + AluSx SINE Alu 1 306 -6 1224 278 172 103 chr2 65106441 65106546 -188150037 - L2 LINE L2 -1092 2222 2126 662 124 31 0 chr2 65106546 65106643 -188149940 + FLAM_A SINE Alu 11 110 -32 1224 278 172 103 chr2 65106643 65106666 -188149917 - L2 LINE L2 -1188 2126 2106 2350 87 3 0 chr2 65106666 65106976 -188149607 + AluY SINE Alu 1 311 0 1224 278 172 103 chr2 65106976 65108203 -188148380 - L2 LINE L2 -1208 2106 567 426 186 0 0 chr2 65108627 65108713 -188147870 + CT-rich Low_complexity Low_complexity 1 86 0 1712 150 0 0 chr2 65108713 65108973 -188147610 - AluSx SINE Alu -52 260 1 1023 213 85 22 chr2 65111156 65111451 -188145132 + L1ME2 LINE L1 5816 6131 -33 21 0 0 0 chr2 65111459 65111480 -188145103 + AT_rich Low_complexity Low_complexity 1 21 0 249 175 70 0 chr2 65111483 65111540 -188145043 + L1ME2 LINE L1 6104 6164 0 472 252 15 8 chr2 65112383 65112514 -188144069 - MLT1L LTR MaLR -340 275 144 1308 266 45 26 chr2 65112623 65113048 -188143535 - LTR16A LTR ERVL 0 450 18 772 218 109 74 chr2 65114257 65114541 -188142042 + MER46C DNA MER2_type 1 294 -44 1447 250 39 12 chr2 65114790 65115206 -188141377 - L1ME LINE L1 -475 5687 5261 254 278 0 61 chr2 65115236 65115351 -188141232 - L1MC4 LINE L1 -1329 6713 6606 588 138 32 11 chr2 65115357 65115451 -188141132 - AluSg1 SINE Alu -213 96 1 890 302 53 32 chr2 65115478 65115733 -188140850 - L2 LINE L2 -814 2500 2252 1027 253 70 49 chr2 65115733 65116121 -188140462 - MSTD LTR MaLR 0 396 1 225 0 0 0 chr2 65116130 65116155 -188140428 + (CA)n Simple_repeat Simple_repeat 2 26 0 890 302 53 32 chr2 65116155 65116383 -188140200 - L2 LINE L2 -1069 2245 1997 264 59 0 0 chr2 65116892 65116926 -188139657 + (TTC)n Simple_repeat Simple_repeat 3 36 0 357 226 0 3 chr2 65116926 65117001 -188139582 - AluJ/FLAM SINE Alu -242 60 1 316 335 48 24 chr2 65117014 65117181 -188139402 - MIR3 SINE MIR -18 190 20 1564 175 4 7 chr2 65117448 65117722 -188138861 - AluJo SINE Alu -8 304 32 657 128 9 0 chr2 65117788 65117897 -188138686 + FRAM SINE Alu 66 175 -1 2357 94 0 0 chr2 65118315 65118624 -188137959 + AluSg SINE Alu 1 309 -1 203 341 45 11 chr2 65118702 65118790 -188137793 + L2 LINE L2 3182 3272 0 188 280 217 35 chr2 65120680 65120823 -188135760 + L2 LINE L2 3094 3262 -10 559 262 115 16 chr2 65121065 65121248 -188135335 + LTR33 LTR ERVL 2 202 -319 257 214 57 29 chr2 65121358 65121428 -188135155 + LTR33 LTR ERVL 448 519 -2 2322 64 6 29 chr2 65122859 65123172 -188133411 - AluSq SINE Alu -7 306 1 24 0 0 0 chr2 65123181 65123205 -188133378 + AT_rich Low_complexity Low_complexity 1 24 0 2021 123 14 0 chr2 65123229 65123521 -188133062 - AluSq SINE Alu -16 297 2 321 254 31 31 chr2 65123533 65123663 -188132920 + L1MD3 LINE L1 5853 5982 -1826 432 192 8 108 chr2 65123849 65123969 -188132614 + L1MD3 LINE L1 6127 7985 -8 1977 128 23 3 chr2 65124014 65124320 -188132263 - AluSx SINE Alu 0 312 1 254 135 19 0 chr2 65124897 65124949 -188131634 - L1MD2 LINE L1 -17 6342 6290 261 281 18 30 chr2 65124949 65125023 -188131560 + L1 LINE L1 3009 3082 -3064 2293 81 0 0 chr2 65125023 65125320 -188131263 + AluSg1 SINE Alu 1 297 -12 261 281 18 30 chr2 65125320 65125412 -188131171 + L1 LINE L1 3082 3173 -2973 816 174 0 21 chr2 65125415 65125559 -188131024 + FLAM_C SINE Alu 3 143 0 685 259 71 1 chr2 65125559 65125830 -188130753 + L1 LINE L1 3144 3434 -2712 3515 175 43 19 chr2 65125830 65126572 -188130011 + L1MB7 LINE L1 5406 6165 -19 685 259 71 1 chr2 65126572 65126592 -188129991 + L1 LINE L1 3434 3451 -2695 1484 204 81 14 chr2 65126609 65126967 -188129616 - L1MD2 LINE L1 -59 6300 5919 1794 163 0 0 chr2 65126978 65127273 -188129310 + AluSx SINE Alu 1 295 -17 1711 124 55 17 chr2 65127586 65127876 -188128707 + AluJo SINE Alu 1 301 -11 297 255 21 0 chr2 65127882 65127976 -188128607 + L1PA15 LINE L1 5794 5889 -277 1265 205 38 80 chr2 65127989 65128050 -188128533 - LTR10A LTR ERV1 -61 548 486 2187 85 3 0 chr2 65128050 65128358 -188128225 - AluSp SINE Alu 0 309 1 1265 205 38 80 chr2 65128358 65128720 -188127863 - LTR10A LTR ERV1 -123 486 142 1651 140 7 41 chr2 65128889 65129046 -188127537 + L1PA15 LINE L1 5881 6025 -140 2108 104 3 0 chr2 65129046 65129343 -188127240 + AluSx SINE Alu 3 300 -12 1651 140 7 41 chr2 65129343 65129477 -188127106 + L1PA15 LINE L1 6025 6162 -3 1602 147 79 164 chr2 65129754 65130072 -188126511 - L1MC3 LINE L1 -2 7783 7440 2250 102 0 3 chr2 65130072 65130376 -188126207 - AluSg SINE Alu -7 303 1 1115 61 0 8 chr2 65130376 65130508 -188126075 - AluSg1 SINE Alu -176 133 3 1602 147 79 164 chr2 65130508 65130661 -188125922 - L1MC3 LINE L1 -344 7441 7277 1922 111 19 57 chr2 65130661 65130976 -188125607 - AluSx SINE Alu -9 303 1 1602 147 79 164 chr2 65130976 65131077 -188125506 - L1MC3 LINE L1 -508 7277 7169 286 337 0 0 chr2 65131077 65131169 -188125414 - MLT1F1 LTR MaLR -443 124 33 1602 147 79 164 chr2 65131169 65132059 -188124524 - L1MC3 LINE L1 -616 7169 6232 993 176 6 11 chr2 65132072 65132248 -188124335 - FRAM SINE Alu -1 175 1 608 220 22 78 chr2 65132248 65132370 -188124213 - L1MC3 LINE L1 -1539 6246 6142 2397 103 0 7 chr2 65132370 65132680 -188123903 + AluSx SINE Alu 1 308 -4 608 220 22 78 chr2 65132680 65132789 -188123794 - L1MC3 LINE L1 -1643 6142 6028 2327 163 31 79 chr2 65133181 65133334 -188123249 - L1MD2 LINE L1 -414 5945 5786 2337 99 3 3 chr2 65133334 65133638 -188122945 - AluSq SINE Alu -9 304 1 2327 163 31 79 chr2 65133638 65134005 -188122578 - L1MD2 LINE L1 -573 5786 5450 519 143 183 16 chr2 65135167 65135293 -188121290 - FRAM SINE Alu -30 146 1 1662 145 16 55 chr2 65135613 65135923 -188120660 + MLT1A2 LTR MaLR 1 298 -76 216 0 0 0 chr2 65135924 65135948 -188120635 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 380 232 111 0 chr2 65136020 65136119 -188120464 + L2 LINE L2 3195 3304 -9 601 168 7 66 chr2 65136905 65137042 -188119541 - FLAM_A SINE Alu -4 129 1 738 229 78 0 chr2 65137079 65137245 -188119338 - MER20 DNA MER1_type -3 216 38 227 167 24 0 chr2 65137380 65137422 -188119161 + L1MC4 LINE L1 8000 8042 0 2084 143 0 16 chr2 65137438 65137752 -188118831 + AluJb SINE Alu 1 309 -3 325 141 16 0 chr2 65137811 65137875 -188118708 - L1MB8 LINE L1 -6 6172 6108 1367 127 105 51 chr2 65137914 65137981 -188118602 - L1MB8 LINE L1 -48 6130 6068 2307 64 3 3 chr2 65137981 65138311 -188118272 - AluSx SINE Alu 0 330 1 1367 127 105 51 chr2 65138311 65138556 -188118027 - L1MB8 LINE L1 -110 6068 5800 1505 174 81 18 chr2 65138557 65138891 -188117692 - L1MB8 LINE L1 -502 5682 5328 4184 140 34 4 chr2 65138896 65139608 -188116975 - L1MD1 LINE L1 0 6242 5510 1389 268 31 42 chr2 65139609 65140087 -188116496 - L1M4b LINE L1 -6376 483 11 241 238 48 0 chr2 65140755 65140818 -188115765 + MIR SINE MIR 126 191 -71 256 243 68 0 chr2 65142084 65142158 -188114425 + HAL1 LINE L1 2336 2414 -93 3772 201 53 38 chr2 65142301 65142436 -188114147 + L1ME1 LINE L1 5095 5226 -940 2291 95 3 0 chr2 65142436 65142741 -188113842 + AluSx SINE Alu 1 306 -6 3772 201 53 38 chr2 65142741 65142873 -188113710 + L1ME1 LINE L1 5226 5355 -811 2209 95 13 16 chr2 65142873 65143179 -188113404 + AluY SINE Alu 1 305 -6 3772 201 53 38 chr2 65143179 65143664 -188112919 + L1ME1 LINE L1 5355 5879 -287 1796 184 82 53 chr2 65143664 65144043 -188112540 + MLT1C LTR MaLR 1 397 -70 2344 97 7 3 chr2 65144043 65144352 -188112231 - AluSx SINE Alu -2 310 1 1796 184 82 53 chr2 65144352 65144423 -188112160 + MLT1C LTR MaLR 397 464 -3 3772 201 53 38 chr2 65144423 65144710 -188111873 + L1ME1 LINE L1 5879 6160 -6 568 263 134 51 chr2 65144744 65144897 -188111686 - L1MC4 LINE L1 -43 7999 7860 2160 92 46 0 chr2 65144897 65145179 -188111404 - AluSp SINE Alu -18 295 1 568 263 134 51 chr2 65145179 65145408 -188111175 - L1MC4 LINE L1 -182 7860 7578 1930 122 56 0 chr2 65145408 65145696 -188110887 - AluSx SINE Alu -8 304 1 568 263 134 51 chr2 65145696 65145722 -188110861 - L1MC4 LINE L1 -464 7578 7556 815 168 0 0 chr2 65145740 65145865 -188110718 - FLAM_C SINE Alu -7 126 2 644 250 37 0 chr2 65145904 65146068 -188110515 - L1MC5 LINE L1 -519 7442 7273 317 259 105 59 chr2 65146275 65146514 -188110069 - L2 LINE L2 -6 3307 3058 293 175 150 12 chr2 65146844 65146924 -188109659 + L1MC5 LINE L1 7278 7368 -593 1568 153 102 25 chr2 65146959 65147234 -188109349 + AluJo SINE Alu 1 296 -16 580 215 37 47 chr2 65148057 65148326 -188108257 - MER93b LTR ERV1 -7 395 19 2022 124 3 0 chr2 65148326 65148636 -188107947 - AluSx SINE Alu 0 311 1 580 215 37 47 chr2 65148636 65148652 -188107931 - MER93b LTR ERV1 -383 19 4 580 184 289 14 chr2 65148711 65148929 -188107654 - MER5C DNA MER1_type 0 324 47 262 320 141 6 chr2 65148931 65149087 -188107496 - MER5B DNA MER1_type 0 178 2 288 0 0 0 chr2 65149830 65149862 -188106721 + (TG)n Simple_repeat Simple_repeat 2 33 0 1015 122 42 69 chr2 65150080 65150102 -188106481 + AluJb SINE Alu 121 142 -170 2144 118 0 20 chr2 65150102 65150408 -188106175 + AluSx SINE Alu 1 300 -12 1015 122 42 69 chr2 65150408 65150574 -188106009 + AluJb SINE Alu 142 304 -8 5079 98 113 7 chr2 65150753 65151568 -188105015 - Tigger3b DNA MER2_type 0 1231 331 258 33 0 0 chr2 65152481 65152511 -188104072 + LTR6A LTR ERV1 73 102 -462 1662 114 166 0 chr2 65152603 65152893 -188103690 - Tigger3b DNA MER2_type -893 338 1 304 274 0 0 chr2 65152895 65152968 -188103615 + L1MC4a LINE L1 5518 5590 -531 751 199 170 18 chr2 65152999 65153170 -188103413 - MER63A DNA MER1_type -6 204 8 389 272 102 47 chr2 65153180 65153200 -188103383 + L1MC4a LINE L1 5575 5592 -2216 186 43 0 0 chr2 65153200 65153223 -188103360 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 389 272 102 47 chr2 65153223 65153365 -188103218 + L1MC4a LINE L1 5592 5758 -2050 5375 103 23 55 chr2 65153365 65154266 -188102317 - MER4D LTR ERV1 0 872 1 389 272 102 47 chr2 65154266 65154356 -188102227 + L1MC4a LINE L1 5758 5842 -1966 284 185 81 62 chr2 65154358 65154457 -188102126 - MER34 LTR ERV1 -5 599 444 1746 147 111 3 chr2 65154510 65154816 -188101767 + L1PA16 LINE L1 5804 6142 -24 673 99 11 0 chr2 65155461 65155552 -188101031 - FLAM_A SINE Alu -28 114 23 1689 154 69 0 chr2 65155827 65156087 -188100496 - AluJb SINE Alu -19 293 16 1368 160 9 5 chr2 65156142 65156361 -188100222 - AluJo SINE Alu -92 220 1 25 0 0 0 chr2 65156363 65156388 -188100195 + AT_rich Low_complexity Low_complexity 1 25 0 1648 148 67 11 chr2 65156801 65157085 -188099498 - AluJo SINE Alu -8 304 5 656 166 7 58 chr2 65157970 65158109 -188098474 + FRAM SINE Alu 1 40 0 2323 105 0 0 chr2 65158676 65158980 -188097603 + AluSx SINE Alu 1 304 -8 2219 113 0 16 chr2 65158980 65159290 -188097293 + AluSg SINE Alu 1 305 -5 331 20 0 40 chr2 65159791 65159841 -188096742 + (TC)n Simple_repeat Simple_repeat 1 48 0 566 202 31 16 chr2 65159842 65159971 -188096612 - FLAM_A SINE Alu -2 131 1 420 249 102 34 chr2 65160269 65160409 -188096174 + L1ME LINE L1 5471 5627 -494 2291 99 0 13 chr2 65160409 65160712 -188095871 + AluSx SINE Alu 1 299 -13 420 249 102 34 chr2 65160712 65160748 -188095835 + L1ME LINE L1 5627 5659 -462 202 280 4 0 chr2 65162321 65162381 -188094202 + MER5A DNA MER1_type 70 130 -48 22 0 0 0 chr2 65162381 65162403 -188094180 + AT_rich Low_complexity Low_complexity 1 22 0 1902 118 0 26 chr2 65162415 65162685 -188093898 + AluJb SINE Alu 16 278 -34 2394 71 0 3 chr2 65163245 65163540 -188093043 + AluY SINE Alu 2 295 -16 297 293 28 0 chr2 65163618 65163724 -188092859 - MIR SINE MIR -50 212 104 969 137 15 117 chr2 65164127 65164332 -188092251 - AluJo SINE Alu -39 273 90 744 235 46 126 chr2 65164637 65164793 -188091790 + MER34 LTR ERV1 1 168 -374 1347 149 123 41 chr2 65164793 65165062 -188091521 + AluJb SINE Alu 1 291 -21 744 235 46 126 chr2 65165062 65165493 -188091090 + MER34 LTR ERV1 168 541 -1 1995 117 34 17 chr2 65166040 65166331 -188090252 - AluSx SINE Alu -16 296 1 2317 93 7 0 chr2 65166708 65166998 -188089585 + AluSg SINE Alu 1 292 -18 282 29 0 0 chr2 65166998 65167033 -188089550 + (TG)n Simple_repeat Simple_repeat 2 36 0 2008 154 0 0 chr2 65167052 65167344 -188089239 + AluJb SINE Alu 1 292 -20 200 57 0 57 chr2 65167358 65167393 -188089190 + (GAAAA)n Simple_repeat Simple_repeat 1 33 0 1172 109 0 0 chr2 65168404 65168560 -188088023 + AluSg/x SINE Alu 149 304 -8 2122 54 77 0 chr2 65168642 65168937 -188087646 - AluY SINE Alu 0 315 1 216 175 0 25 chr2 65169067 65169107 -188087476 + GA-rich Low_complexity Low_complexity 5 43 0 255 339 142 0 chr2 65169425 65169552 -188087031 + LTR33 LTR ERVL 1 145 -376 2334 100 0 0 chr2 65169861 65170160 -188086423 - AluY SINE Alu -12 299 1 204 97 0 0 chr2 65170204 65170235 -188086348 + (GGGA)n Simple_repeat Simple_repeat 4 34 0 7598 123 3 22 chr2 65170309 65170475 -188086108 - L1P LINE L1 -992 5154 4986 2118 152 0 0 chr2 65170475 65170785 -188085798 - AluSx SINE Alu -2 310 1 2244 124 7 0 chr2 65170791 65171089 -188085494 - AluSx SINE Alu -12 300 1 7598 123 3 22 chr2 65171089 65172095 -188084488 - L1P LINE L1 -1165 4981 3997 6969 55 25 2 chr2 65172095 65173069 -188083514 + L1PA10 LINE L1 5175 6168 0 1723 146 0 0 chr2 65174019 65174292 -188082291 + AluSx SINE Alu 39 311 0 2150 106 3 7 chr2 65174506 65174813 -188081770 - AluSg SINE Alu 0 306 1 368 40 20 0 chr2 65175246 65175296 -188081287 + (TTCC)n Simple_repeat Simple_repeat 4 54 0 2227 103 10 10 chr2 65175297 65175607 -188080976 - AluSg SINE Alu 0 310 1 669 203 24 0 chr2 65175630 65175753 -188080830 - FLAM_A SINE Alu -7 126 1 189 107 0 0 chr2 65176371 65176399 -188080184 + (A)n Simple_repeat Simple_repeat 1 28 0 2026 136 7 7 chr2 65176739 65177041 -188079542 + AluJb SINE Alu 1 302 -10 2272 117 3 0 chr2 65177065 65177374 -188079209 - AluSq SINE Alu -3 310 1 2399 103 0 7 chr2 65177433 65177743 -188078840 - AluSx SINE Alu -4 308 1 1766 162 9 64 chr2 65177788 65178116 -188078467 + AluJb SINE Alu 2 311 -1 1865 161 6 16 chr2 65178530 65178841 -188077742 + AluJb SINE Alu 1 308 -4 23 0 0 0 chr2 65178841 65178864 -188077719 + AT_rich Low_complexity Low_complexity 1 23 0 1742 158 47 58 chr2 65179474 65179854 -188076729 - MLT1B LTR MaLR 0 390 15 733 274 120 4 chr2 65181138 65181372 -188075211 - MIR SINE MIR 0 262 2 2293 83 3 35 chr2 65181815 65182127 -188074456 - AluSp SINE Alu -11 302 1 2402 92 0 6 chr2 65182127 65182441 -188074142 - AluSx SINE Alu 0 312 1 1737 154 50 3 chr2 65182684 65182982 -188073601 + AluJb SINE Alu 1 312 0 538 238 225 29 chr2 65183023 65183338 -188073245 - L1MC4 LINE L1 -57 7985 7609 206 380 20 30 chr2 65183374 65183474 -188073109 + L2 LINE L2 2990 3088 -184 349 287 127 44 chr2 65183561 65183742 -188072841 + MIR SINE MIR 13 208 -54 1979 87 90 11 chr2 65185144 65185421 -188071162 + AluSx SINE Alu 1 299 -13 1705 154 3 25 chr2 65185472 65185757 -188070826 - AluJo SINE Alu -23 289 11 609 351 30 4 chr2 65186025 65186256 -188070327 + MIR SINE MIR 20 256 -6 3560 132 156 7 chr2 65187008 65187623 -188068960 + MER39 LTR ERV1 1 707 0 1911 150 184 44 chr2 65187628 65188101 -188068482 + MER34C LTR ERV1 47 585 0 205 324 0 0 chr2 65188378 65188446 -188068137 - L2 LINE L2 -15 3298 3231 1558 159 48 4 chr2 65188461 65188731 -188067852 + AluJo SINE Alu 1 282 -30 789 163 47 16 chr2 65188772 65188901 -188067682 + AluJo SINE Alu 1 133 -169 441 231 103 19 chr2 65189841 65189997 -188066586 - Charlie8 DNA MER1_type -2142 275 107 1062 212 117 94 chr2 65190043 65190572 -188066011 + MER34 LTR ERV1 2 542 0 226 301 59 82 chr2 65191650 65191869 -188064714 - L2 LINE L2 -528 2786 2573 872 196 6 18 chr2 65192669 65192832 -188063751 + AluJo SINE Alu 137 297 -15 477 155 31 91 chr2 65192876 65192991 -188063592 + MSTA LTR MaLR 1 171 -257 2180 124 3 0 chr2 65192991 65193289 -188063294 - AluSq SINE Alu -14 299 1 477 155 31 91 chr2 65193289 65193335 -188063248 + MSTA LTR MaLR 171 218 -210 22 70 0 0 chr2 65193402 65193445 -188063138 + AT_rich Low_complexity Low_complexity 1 43 0 2424 100 3 0 chr2 65193677 65193987 -188062596 - AluSp SINE Alu -2 311 1 360 229 14 0 chr2 65194036 65194106 -188062477 + L2 LINE L2 3184 3254 -18 2407 89 0 0 chr2 65194176 65194479 -188062104 - AluSx SINE Alu -9 303 1 812 172 8 0 chr2 65194497 65194619 -188061964 - FLAM_C SINE Alu -19 124 2 1742 181 7 0 chr2 65194692 65194985 -188061598 + AluJb SINE Alu 1 295 -17 4222 99 51 42 chr2 65195354 65195555 -188061028 - MER39B LTR ERV1 0 653 455 2458 74 7 0 chr2 65195555 65195864 -188060719 + AluY SINE Alu 1 311 0 4222 99 51 42 chr2 65195864 65196309 -188060274 - MER39B LTR ERV1 -198 455 1 1897 235 22 14 chr2 65196665 65197082 -188059501 + MER21B LTR ERV1 1 420 -443 1839 160 4 4 chr2 65197221 65197502 -188059081 - AluJo SINE Alu -30 282 2 402 241 217 30 chr2 65197514 65197680 -188058903 + MER21B LTR ERV1 613 809 -54 5052 101 18 55 chr2 65197702 65198501 -188058082 + MER4E LTR ERV1 1 769 -10 4935 130 18 43 chr2 65198506 65199338 -188057245 + MER4E-int LTR ERV1 1 811 -5947 347 91 0 0 chr2 65200419 65200463 -188056120 + Alu SINE Alu 1 44 -257 1600 80 33 9 chr2 65200463 65200675 -188055908 + AluSg/x SINE Alu 92 308 -4 2106 193 52 26 chr2 65201493 65201974 -188054609 + MER110-int LTR ERV1 129 582 -4065 239 204 0 0 chr2 65203226 65203280 -188053303 - LTR66 LTR ERVL -171 439 386 271 297 0 11 chr2 65203280 65203371 -188053212 + (TA)n Simple_repeat Simple_repeat 2 91 0 455 314 74 76 chr2 65204743 65205403 -188051180 + MER110-int LTR ERV1 3225 3883 -2918 759 311 79 70 chr2 65205968 65206698 -188049885 + MER110-int LTR ERV1 2137 5167 -1634 4820 117 38 57 chr2 65209364 65209592 -188046991 + MER4E LTR ERV1 2 233 -546 2217 111 13 0 chr2 65209592 65209898 -188046685 + AluSx SINE Alu 1 310 -2 4820 117 38 57 chr2 65209898 65210462 -188046121 + MER4E LTR ERV1 233 779 0 308 331 153 48 chr2 65210550 65211293 -188045290 - L2 LINE L2 -723 2591 1771 2099 129 0 3 chr2 65211412 65211707 -188044876 - AluSq SINE Alu -15 298 5 1688 125 114 14 chr2 65212052 65212333 -188044250 + AluSg1 SINE Alu 1 309 0 2359 63 0 7 chr2 65212647 65212947 -188043636 - AluY SINE Alu -13 298 1 1539 142 6 125 chr2 65212972 65213172 -188043411 - AluJb SINE Alu -9 303 81 185 0 0 39 chr2 65213172 65213198 -188043385 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 2328 43 11 7 chr2 65213198 65213477 -188043106 - AluY SINE Alu -31 280 1 1539 142 6 125 chr2 65213477 65213619 -188042964 - AluJb SINE Alu -229 83 1 2328 98 0 0 chr2 65213658 65213953 -188042630 + AluY SINE Alu 1 295 -16 2270 138 66 47 chr2 65214580 65215006 -188041577 + Tigger2a DNA MER2_type 1 434 0 303 243 93 9 chr2 65215458 65215565 -188041018 + L1MC5 LINE L1 7275 7390 -571 255 79 0 0 chr2 65215619 65215657 -188040926 + (GA)n Simple_repeat Simple_repeat 1 38 0 760 239 22 27 chr2 65215703 65215887 -188040696 + MER58A DNA MER1_type 9 191 -33 1797 171 0 23 chr2 65215893 65216198 -188040385 - AluJo SINE Alu -14 298 1 1625 77 0 0 chr2 65216401 65216595 -188039988 - AluSg SINE Alu -116 194 1 513 299 82 71 chr2 65217418 65217625 -188038958 + L1MC4a LINE L1 5259 5186 -935 2376 78 10 0 chr2 65217625 65217921 -188038662 + AluSp SINE Alu 1 299 -14 513 299 82 71 chr2 65217921 65218388 -188038195 + L1MC4a LINE L1 5185 5646 -475 883 166 0 0 chr2 65218865 65219004 -188037579 - FLAM_C SINE Alu -4 139 1 2410 114 39 98 chr2 65219506 65219572 -188037011 + MER4B LTR ERV1 1 69 -697 3458 116 93 0 chr2 65219572 65220079 -188036504 + MER41C LTR ERV1 1 554 0 2410 114 39 98 chr2 65220079 65220277 -188036306 + MER4B LTR ERV1 69 277 -489 2201 103 0 32 chr2 65220277 65220588 -188035995 - AluSg SINE Alu -9 301 1 2387 94 0 3 chr2 65220594 65220903 -188035680 - AluSg SINE Alu -2 308 1 2410 114 39 98 chr2 65220903 65220934 -188035649 + MER4B LTR ERV1 282 313 -453 1898 101 0 0 chr2 65220934 65221181 -188035402 - AluY SINE Alu -64 247 1 2410 114 39 98 chr2 65221181 65221543 -188035040 + MER4B LTR ERV1 313 763 -3 1951 149 3 0 chr2 65222036 65222325 -188034258 - AluJb SINE Alu -22 290 1 2055 129 3 0 chr2 65222415 65222710 -188033873 - AluSq SINE Alu -17 296 1 205 219 31 78 chr2 65222965 65223029 -188033554 + L2 LINE L2 3252 3312 -1 185 326 87 65 chr2 65223499 65223637 -188032946 + MIR SINE MIR 35 175 -87 568 258 81 36 chr2 65223760 65223981 -188032602 - MER102b DNA MER1_type -47 294 64 2308 108 3 0 chr2 65223985 65224290 -188032293 + AluSq SINE Alu 1 306 -7 898 222 34 152 chr2 65224614 65225113 -188031470 + MER21B LTR ERV1 6 445 -418 2068 123 7 0 chr2 65225183 65225475 -188031108 + AluSq SINE Alu 7 300 -13 2598 156 54 85 chr2 65225476 65226053 -188030530 - MER4D LTR ERV1 -39 864 306 2123 218 63 47 chr2 65226133 65227007 -188029576 - MER52A LTR ERV1 -59 1696 667 507 163 0 51 chr2 65227041 65227172 -188029411 - MER4D LTR ERV1 -568 198 97 1714 156 16 36 chr2 65227192 65227500 -188029083 - MER49 LTR ERV1 -621 302 1 27 29 0 0 chr2 65227504 65227538 -188029045 + AT_rich Low_complexity Low_complexity 1 34 0 4052 142 24 19 chr2 65227605 65228114 -188028469 + MER41B LTR ERV1 1 515 -120 2133 144 0 3 chr2 65228114 65228426 -188028157 - AluSx SINE Alu -1 311 1 4052 142 24 19 chr2 65228426 65228548 -188028035 + MER41B LTR ERV1 515 635 0 1779 165 34 7 chr2 65228609 65228900 -188027683 - AluJo SINE Alu -13 299 1 489 214 0 0 chr2 65228901 65228990 -188027593 + MER8 DNA MER2_type 151 239 0 * 690 214 49 80 chr2 65228990 65229213 -188027370 + MER21B LTR ERV1 496 711 -152 964 135 0 0 chr2 65229877 65230010 -188026573 + FLAM_C SINE Alu 1 133 0 1947 103 12 66 chr2 65230234 65230553 -188026030 + AluSc SINE Alu 2 303 -6 950 226 45 113 chr2 65230661 65231086 -188025497 - L1M4 LINE L1 -968 5178 4783 461 195 124 44 chr2 65231258 65231371 -188025212 + MER39 LTR ERV1 1 91 -616 1706 183 25 9 chr2 65231373 65231696 -188024887 + MER39 LTR ERV1 340 667 -40 1183 117 0 6 chr2 65231925 65232096 -188024487 - AluSp SINE Alu -7 306 137 2131 130 0 0 chr2 65232149 65232449 -188024134 + AluSx SINE Alu 1 300 -12 1763 80 129 8 chr2 65232474 65232738 -188023845 + AluSg1 SINE Alu 1 296 -13 1504 171 96 4 chr2 65233555 65233836 -188022747 + AluJo SINE Alu 1 307 -5 1850 148 0 34 chr2 65233991 65234289 -188022294 - AluJb SINE Alu -23 289 2 225 243 146 10 chr2 65234383 65234486 -188022097 + L1MEd LINE L1 59 175 -5944 334 346 22 15 chr2 65234487 65234623 -188021960 + L1MEd LINE L1 249 385 -5734 388 154 34 94 chr2 65234648 65234701 -188021882 + L1MEd LINE L1 683 738 -5381 2080 137 3 10 chr2 65234701 65235015 -188021568 + AluSx SINE Alu 1 312 0 388 154 34 94 chr2 65235015 65235110 -188021473 + L1MEd LINE L1 738 822 -5297 1115 194 65 0 chr2 65235112 65235276 -188021307 - AluJb SINE Alu -14 298 117 270 0 0 0 chr2 65235276 65235306 -188021277 + (TA)n Simple_repeat Simple_repeat 2 31 0 1115 194 65 0 chr2 65235306 65235342 -188021241 - AluJb SINE Alu -195 117 85 1310 76 0 0 chr2 65235685 65235843 -188020740 + AluY SINE Alu 1 158 -153 498 181 0 0 chr2 65235843 65235926 -188020657 - AluJ SINE Alu -96 216 134 2215 96 0 0 chr2 65235926 65236238 -188020345 - AluSc SINE Alu 0 312 1 821 154 0 0 chr2 65236257 65236387 -188020196 - AluJ SINE Alu -172 130 1 2401 84 0 3 chr2 65236647 65236958 -188019625 + AluSq SINE Alu 1 310 -3 513 249 24 25 chr2 65237006 65237142 -188019441 - MIR SINE MIR -65 143 10 183 100 0 0 chr2 65237160 65237190 -188019393 + (T)n Simple_repeat Simple_repeat 1 30 0 2120 83 0 18 chr2 65237352 65237629 -188018954 + AluY SINE Alu 38 309 -2 1384 260 48 31 chr2 65237649 65238356 -188018227 + L1ME LINE L1 830 1548 -4982 883 282 130 38 chr2 65238392 65238821 -188017762 + L1ME LINE L1 1883 2364 -4176 1998 150 0 7 chr2 65238821 65239127 -188017456 - AluJb SINE Alu -7 305 2 883 282 130 38 chr2 65239127 65239337 -188017246 + L1ME LINE L1 2364 2553 -3987 829 159 8 0 chr2 65239454 65239586 -188016997 + FAM SINE Alu 12 144 -41 396 221 69 28 chr2 65239635 65239719 -188016864 + L1ME LINE L1 2720 2814 -3726 1586 157 43 40 chr2 65239719 65240018 -188016565 + AluJo SINE Alu 1 300 -12 396 221 69 28 chr2 65240018 65240078 -188016505 + L1ME LINE L1 2814 2870 -3670 2253 109 10 0 chr2 65240097 65240401 -188016182 + AluSp SINE Alu 1 307 -6 1453 161 150 0 chr2 65240427 65240681 -188015902 - AluJb SINE Alu -10 292 1 438 235 0 10 chr2 65240693 65240795 -188015788 + FLAM_C SINE Alu 39 139 -4 1056 205 29 144 chr2 65240797 65241303 -188015280 + L1ME LINE L1 2889 3319 -3221 1626 148 74 27 chr2 65241303 65241600 -188014983 + AluJo SINE Alu 1 311 -1 1056 205 29 144 chr2 65241600 65241684 -188014899 + L1ME LINE L1 3319 3411 -3129 376 274 61 6 chr2 65241654 65241818 -188014765 + L1ME LINE L1 4068 4240 -2300 * 16584 74 61 8 chr2 65241897 65244292 -188012291 - Charlie3 DNA MER1_type -4 2706 186 3711 168 43 37 chr2 65244304 65245339 -188011244 - L1PB4 LINE L1 -2 6154 5115 1849 138 26 40 chr2 65246079 65246383 -188010200 - AluJb SINE Alu -12 300 1 305 75 0 0 chr2 65246765 65246805 -188009778 + MLT1J LTR MaLR 402 441 -70 30 45 0 0 chr2 65246808 65246852 -188009731 + AT_rich Low_complexity Low_complexity 1 44 0 1007 128 0 0 chr2 65246865 65247006 -188009577 - AluJb SINE Alu -171 141 1 351 187 13 0 chr2 65247006 65247081 -188009502 + MLT1J LTR MaLR 436 511 0 32 0 0 0 chr2 65247999 65248031 -188008552 + AT_rich Low_complexity Low_complexity 1 32 0 24 53 0 0 chr2 65248860 65248898 -188007685 + AT_rich Low_complexity Low_complexity 1 38 0 280 323 177 8 chr2 65248997 65249121 -188007462 + MER5A DNA MER1_type 45 189 0 1114 134 37 0 chr2 65249572 65249759 -188006824 - MER20 DNA MER1_type 0 219 26 2412 55 3 19 chr2 65250688 65250996 -188005587 + AluY SINE Alu 1 303 -8 3018 153 34 57 chr2 65251095 65251422 -188005161 - MER7C DNA MER2_type -2426 602 294 2049 130 37 0 chr2 65251422 65251721 -188004862 + AluSg SINE Alu 1 310 0 3018 153 34 57 chr2 65251721 65252009 -188004574 - MER7C DNA MER2_type -2734 294 1 188 306 0 32 chr2 65252073 65252135 -188004448 + L2 LINE L2 3133 3192 -80 717 176 93 9 chr2 65252997 65253138 -188003445 + LTR8A LTR ERV1 1 140 -401 2328 95 3 0 chr2 65253138 65253444 -188003139 + AluSx SINE Alu 1 307 -5 717 176 93 9 chr2 65253444 65253471 -188003112 + LTR8A LTR ERV1 140 163 -378 987 128 0 0 chr2 65253473 65253606 -188002977 + AluSq/x SINE Alu 1 133 -179 1877 172 78 82 chr2 65253632 65254225 -188002358 + LTR8A LTR ERV1 161 727 0 21 0 0 0 chr2 65254318 65254339 -188002244 + AT_rich Low_complexity Low_complexity 1 21 0 599 216 116 12 chr2 65256416 65256675 -187999908 + pTR5 LTR ERV1 743 1028 -1410 4024 87 155 70 chr2 65256754 65257515 -187999068 + LTR12 LTR ERV1 1 826 0 1286 171 84 13 chr2 65257515 65257754 -187998829 + AluJb SINE Alu 31 286 -26 2033 138 10 0 chr2 65258165 65258455 -187998128 + AluSx SINE Alu 1 293 -19 1797 170 13 7 chr2 65258901 65259201 -187997382 - AluJo SINE Alu -10 302 1 2042 149 0 16 chr2 65260326 65260664 -187995919 + AluSx SINE Alu 1 312 0 2205 99 3 0 chr2 65260846 65261166 -187995417 - AluSx SINE Alu 0 323 3 346 330 67 0 chr2 65261201 65261356 -187995227 - MIR3 SINE MIR -67 141 10 324 0 0 0 chr2 65263084 65263120 -187993463 + (TG)n Simple_repeat Simple_repeat 1 36 0 1677 164 0 11 chr2 65263121 65263401 -187993182 - AluJb SINE Alu -30 282 6 2103 127 7 10 chr2 65263409 65263716 -187992867 - AluJb SINE Alu -6 306 1 2181 95 30 0 chr2 65264659 65264954 -187991629 - AluSx SINE Alu -8 304 1 1676 156 76 3 chr2 65265059 65265347 -187991236 - AluJo SINE Alu -3 309 1 744 154 0 23 chr2 65265579 65265709 -187990874 - FLAM_C SINE Alu -2 131 5 2121 122 3 0 chr2 65266105 65266393 -187990190 + AluSx SINE Alu 1 289 -23 218 203 0 16 chr2 65266397 65266461 -187990122 + GA-rich Low_complexity Low_complexity 1 63 0 1766 184 0 7 chr2 65266612 65266921 -187989662 - AluJo SINE Alu -5 307 1 529 154 18 0 chr2 65368209 65368319 -187888264 + (TA)n Simple_repeat Simple_repeat 1 112 0 2114 101 25 0 chr2 65368319 65368597 -187887986 - AluSx SINE Alu -27 285 1 250 302 0 75 chr2 65368767 65368873 -187887710 - MIR3 SINE MIR -103 105 8 593 180 29 7 chr2 65370158 65370297 -187886286 - L1M4 LINE L1 -1034 5112 4971 191 258 30 45 chr2 65370816 65370882 -187885701 - L3 LINE CR1 -3 1574 1510 222 109 0 109 chr2 65370887 65370933 -187885650 - MIR SINE MIR -106 156 116 264 242 170 20 chr2 65370934 65371087 -187885496 - MLT1K LTR MaLR -159 429 254 191 93 37 37 chr2 65371094 65371148 -187885435 + (TATATG)n Simple_repeat Simple_repeat 5 58 0 1890 148 17 13 chr2 65371271 65371569 -187885014 + AluJb SINE Alu 1 299 -13 2067 152 0 0 chr2 65371907 65372204 -187884379 - AluJb SINE Alu -15 297 1 357 159 0 0 chr2 65372312 65372375 -187884208 + CT-rich Low_complexity Low_complexity 2 64 0 785 257 44 54 chr2 65372511 65372657 -187883926 - L1MEc LINE L1 -2605 3610 3464 2248 117 3 0 chr2 65372657 65372955 -187883628 + AluSx SINE Alu 1 299 -13 785 257 44 54 chr2 65372955 65373216 -187883367 - L1MEc LINE L1 -2751 3464 3207 * 39035 65 4 2 chr2 65373205 65379336 -187877247 - L1PA5 LINE L1 -1 6153 11 1986 257 96 42 chr2 65379345 65379427 -187877156 - L1MEc LINE L1 -2998 3217 3141 1716 186 0 7 chr2 65379427 65379737 -187876846 - AluJb SINE Alu 0 312 1 1986 257 96 42 chr2 65379737 65381567 -187875016 - L1MEc LINE L1 -3074 3141 1242 1759 153 20 20 chr2 65381626 65381926 -187874657 - AluJb SINE Alu -12 300 1 225 385 11 0 chr2 65381979 65382070 -187874513 + L3 LINE CR1 302 393 -1184 598 317 56 46 chr2 65382467 65382773 -187873810 + L3 LINE CR1 403 711 -866 2331 80 3 0 chr2 65382814 65383113 -187873470 - AluY SINE Alu -11 300 1 359 309 16 8 chr2 65383255 65383445 -187873138 + L3 LINE CR1 798 1044 -533 322 203 179 16 chr2 65383826 65383949 -187872634 + L1M4 LINE L1 4055 4197 -1949 597 301 56 107 chr2 65384036 65384465 -187872118 + L3 LINE CR1 1092 1498 -79 1763 167 10 26 chr2 65384499 65384805 -187871778 - AluJo SINE Alu -11 301 1 338 337 99 17 chr2 65384825 65384997 -187871586 - MIR SINE MIR -60 202 17 193 375 0 0 chr2 65385022 65385086 -187871497 + L3 LINE CR1 1513 1576 -1 216 318 0 0 chr2 65386426 65386492 -187870091 - L3b LINE CR1 -246 1337 1272 212 206 29 44 chr2 65388617 65388685 -187867898 - MIR SINE MIR -101 161 95 4039 106 67 79 chr2 65388968 65389731 -187866852 - LTR1 LTR ERV1 0 785 32 209 297 154 59 chr2 65389897 65390033 -187866550 + L2 LINE L2 1560 1682 -1632 213 39 0 0 chr2 65390033 65390059 -187866524 + (CA)n Simple_repeat Simple_repeat 2 27 0 209 297 154 59 chr2 65390059 65390195 -187866388 + L2 LINE L2 1682 1858 -1456 327 301 8 30 chr2 65390899 65390911 -187865672 + CT-rich Low_complexity Low_complexity 1 12 -1520 1707 146 48 24 chr2 65390911 65391205 -187865378 - AluJo SINE Alu -11 301 1 327 301 8 30 chr2 65391205 65391241 -187865342 + CT-rich Low_complexity Low_complexity 12 47 -1485 9175 64 4 0 chr2 65391241 65392308 -187864275 - MER11C LTR ERVK 0 1071 1 327 301 8 30 chr2 65392308 65392466 -187864117 + CT-rich Low_complexity Low_complexity 47 1532 0 695 121 0 0 chr2 65393133 65393232 -187863351 - LTR12 LTR ERV1 0 714 616 291 222 33 22 chr2 65393235 65393325 -187863258 - LTR30 LTR ERV1 -79 643 553 2000 84 7 44 chr2 65393326 65393622 -187862961 - LTR12 LTR ERV1 -429 285 1 278 322 142 8 chr2 65393972 65394239 -187862344 + L2 LINE L2 1982 2284 -1030 578 273 127 40 chr2 65394269 65394544 -187862039 - LTR16C LTR ERVL -4 487 189 732 320 65 50 chr2 65394816 65394878 -187861705 + L2 LINE L2 2733 2793 -479 2539 115 47 68 chr2 65394878 65395321 -187861262 + MER61C LTR ERV1 1 434 0 732 320 65 50 chr2 65395321 65395776 -187860807 + L2 LINE L2 2793 3268 -4 186 339 159 40 chr2 65395979 65396092 -187860491 - L2 LINE L2 -495 2819 2721 2113 131 0 25 chr2 65396092 65396412 -187860171 + AluJb SINE Alu 1 312 0 186 339 159 40 chr2 65396412 65396676 -187859907 - L2 LINE L2 -593 2721 2397 1945 198 61 53 chr2 65396777 65396889 -187859694 + MLT1D LTR MaLR 1 111 -394 1817 122 92 0 chr2 65396889 65397160 -187859423 - AluJo SINE Alu -16 296 1 1945 198 61 53 chr2 65397160 65397541 -187859042 + MLT1D LTR MaLR 111 498 -7 334 278 56 14 chr2 65397698 65397842 -187858741 + L1MEd LINE L1 2 151 -5968 781 305 26 50 chr2 65398272 65398689 -187857894 + L1MEd LINE L1 321 727 -5392 1474 161 107 93 chr2 65398694 65399115 -187857468 - MSTB1 LTR MaLR -5 427 1 976 296 132 31 chr2 65399143 65400647 -187855936 + L1MEd LINE L1 776 2431 -3879 2087 137 0 0 chr2 65400670 65400977 -187855606 + AluSx SINE Alu 1 307 -5 23 0 0 0 chr2 65400984 65401007 -187855576 + AT_rich Low_complexity Low_complexity 1 23 0 1382 278 134 14 chr2 65401071 65401917 -187854666 + L1MEd LINE L1 2573 3519 -2610 386 178 56 22 chr2 65401936 65402026 -187854557 - L1MC5 LINE L1 -36 7925 7833 581 220 10 8 chr2 65402063 65402212 -187854371 - L1MD3 LINE L1 -1 7994 6091 198 0 0 0 chr2 65402294 65402316 -187854267 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 755 184 9 0 chr2 65402322 65402436 -187854147 - FLAM_A SINE Alu -18 115 1 182 336 112 9 chr2 65404338 65404445 -187852138 - L2 LINE L2 -1199 2115 1998 1099 146 32 0 chr2 65406481 65406639 -187849944 - FAM SINE Alu -12 163 1 377 286 94 66 chr2 65406879 65407305 -187849278 + L2 LINE L2 2210 2647 -667 2048 135 3 10 chr2 65407309 65407613 -187848970 - AluSx SINE Alu -10 302 1 498 225 35 110 chr2 65407641 65407868 -187848715 + LTR37B LTR ERV1 6 215 -253 855 98 15 30 chr2 65407930 65408062 -187848521 - L1PB1 LINE L1 -2 6149 6020 355 204 19 39 chr2 65408156 65408259 -187848324 + LTR37B LTR ERV1 317 417 -51 2990 161 17 19 chr2 65408266 65408806 -187847777 - L1MA7 LINE L1 0 6291 5753 2352 102 0 3 chr2 65409248 65409551 -187847032 + AluSc SINE Alu 1 302 -7 25 31 0 0 chr2 65410419 65410451 -187846132 + AT_rich Low_complexity Low_complexity 1 32 0 368 143 0 14 chr2 65411351 65411421 -187845162 + LTR37B LTR ERV1 400 468 0 332 307 86 100 chr2 65411549 65411920 -187844663 + L2 LINE L2 2816 3181 -91 288 348 11 0 chr2 65413506 65413595 -187842988 - MIR3 SINE MIR -22 186 97 407 234 23 39 chr2 65414276 65414404 -187842179 + MIR SINE MIR 20 145 -117 2761 133 54 0 chr2 65415386 65415792 -187840791 + MSTA LTR MaLR 1 428 0 180 180 120 40 chr2 65416012 65416062 -187840521 + MIR3 SINE MIR 129 182 -26 255 408 89 0 chr2 65416572 65416729 -187839854 + MIR SINE MIR 6 176 -86 345 246 93 87 chr2 65416772 65417061 -187839522 - L1ME4a LINE L1 -1 6120 5830 408 292 73 15 chr2 65417651 65417788 -187838795 + MIR3 SINE MIR 30 174 -34 618 132 0 0 chr2 65419613 65419704 -187836879 + AluSp/q SINE Alu 215 305 -8 1485 168 92 3 chr2 65419902 65420206 -187836377 - L1MB7 LINE L1 0 6184 5854 347 324 54 27 chr2 65420652 65420800 -187835783 - MIR SINE MIR -98 164 13 590 214 14 7 chr2 65420825 65420970 -187835613 + MER104 DNA Tc2 30 175 -5 2024 118 35 0 chr2 65421878 65422165 -187834418 + AluSx SINE Alu 1 297 -15 324 258 62 0 chr2 65422168 65422265 -187834318 + GA-rich Low_complexity Low_complexity 3 105 0 374 296 128 54 chr2 65422328 65422925 -187833658 - L2 LINE L2 -5 3308 2660 421 277 61 14 chr2 65423227 65423375 -187833208 - MIR SINE MIR -72 190 36 318 50 0 0 chr2 65423753 65423793 -187832790 + (CA)n Simple_repeat Simple_repeat 1 40 0 198 262 196 19 chr2 65424606 65424713 -187831870 - L2 LINE L2 -8 3305 3180 415 335 0 0 chr2 65424809 65424964 -187831619 - MER66-int LTR ERV1 -416 6260 6106 213 216 0 0 chr2 65425576 65425613 -187830970 + (TG)n Simple_repeat Simple_repeat 1 37 0 719 261 169 27 chr2 65426182 65426593 -187829990 + L1ME4a LINE L1 5475 5932 -189 266 342 25 0 chr2 65427398 65427518 -187829065 - L2 LINE L2 -541 2773 2651 364 287 139 24 chr2 65427923 65428092 -187828491 + MIR SINE MIR 1 188 -60 23 33 0 0 chr2 65428129 65428159 -187828424 + AT_rich Low_complexity Low_complexity 1 30 0 2207 102 0 3 chr2 65429508 65429801 -187826782 + AluSx SINE Alu 5 296 -16 317 206 16 0 chr2 65430103 65430166 -187826417 - MIR SINE MIR -115 147 84 4017 218 161 77 chr2 65431295 65431324 -187825259 + HAL1 LINE L1 7 32 -2475 4236 156 50 3 chr2 65431324 65431997 -187824586 + MER44D DNA MER2_type 1 705 0 4017 218 161 77 chr2 65431997 65432638 -187823945 + HAL1 LINE L1 32 617 -1890 2400 121 47 16 chr2 65432638 65433002 -187823581 + THE1C LTR MaLR 1 375 0 4017 218 161 77 chr2 65433002 65433935 -187822648 + HAL1 LINE L1 617 1770 -737 962 226 11 6 chr2 65433935 65434112 -187822471 + MER45A DNA AcHobo 1 178 0 4017 218 161 77 chr2 65434112 65434236 -187822347 + HAL1 LINE L1 1770 1882 -625 1856 156 9 19 chr2 65435004 65435319 -187821264 - AluJb SINE Alu 0 312 1 1769 164 45 7 chr2 65436907 65437194 -187819389 + AluSx SINE Alu 1 298 -14 510 231 67 26 chr2 65437271 65437454 -187819129 - MLT1J2 LTR MaLR -169 277 69 904 270 106 11 chr2 65438106 65438473 -187818110 + MLT1I LTR MaLR 1 402 -7 39679 54 13 5 chr2 65438711 65444812 -187811771 - L1PA4 LINE L1 -2 6153 11 436 351 48 18 chr2 65445656 65445824 -187810759 - MER91A DNA MER1_type 0 196 24 321 26 0 0 chr2 65446339 65446377 -187810206 + (CA)n Simple_repeat Simple_repeat 2 39 0 313 303 76 14 chr2 65448038 65448183 -187808400 + MIR3 SINE MIR 7 160 -48 310 259 54 18 chr2 65448835 65448947 -187807636 - LTR16C LTR ERVL -162 329 214 221 284 18 73 chr2 65449548 65449657 -187806926 + L2 LINE L2 3201 3303 -10 2370 99 0 6 chr2 65449809 65450121 -187806462 + AluY SINE Alu 1 310 -1 1869 79 0 0 chr2 65450203 65450430 -187806153 + AluSq SINE Alu 75 301 -12 1714 167 0 18 chr2 65450430 65450711 -187805872 - AluJo SINE Alu -35 277 1 891 221 113 0 chr2 65450753 65450984 -187805599 - MIR SINE MIR 0 262 6 29 28 0 0 chr2 65451401 65451437 -187805146 + AT_rich Low_complexity Low_complexity 1 36 0 2811 197 12 39 chr2 65451523 65452091 -187804492 + MLT2B3 LTR ERVL 2 554 0 199 323 6 89 chr2 65452294 65452365 -187804218 + L2 LINE L2 3163 3216 -97 1455 184 53 17 chr2 65452365 65452664 -187803919 - AluJb SINE Alu -2 310 1 199 323 6 89 chr2 65452664 65452750 -187803833 + L2 LINE L2 3216 3307 -6 1000 172 61 0 chr2 65453046 65453244 -187803339 - L1PA16 LINE L1 -1 6165 5956 620 148 78 70 chr2 65453697 65453839 -187802744 + L2 LINE L2 3171 3313 0 288 319 0 0 chr2 65455669 65455741 -187800842 - L2 LINE L2 -4 3309 3238 1877 165 3 7 chr2 65455806 65456103 -187800480 - AluJb SINE Alu -15 297 2 2192 116 3 0 chr2 65456341 65456635 -187799948 - AluSx SINE Alu -17 295 1 325 294 68 17 chr2 65456799 65456976 -187799607 - L1M4 LINE L1 -1430 4716 4531 473 295 82 37 chr2 65457047 65457399 -187799184 - L1M4 LINE L1 -1737 4409 4042 6425 77 4 1 chr2 65457416 65458977 -187797606 - L1PA8A LINE L1 -27 6104 4538 30 27 0 0 chr2 65459535 65459572 -187797011 + AT_rich Low_complexity Low_complexity 1 37 0 1501 162 109 11 chr2 65459879 65460145 -187796438 + AluJb SINE Alu 1 292 -20 410 219 0 0 chr2 65460153 65460226 -187796357 - L2 LINE L2 -51 3262 3190 * 451 270 121 35 chr2 65460225 65460399 -187796184 + MIR SINE MIR 68 256 -6 313 250 0 0 chr2 65460593 65460661 -187795922 - L1ME LINE L1 -544 5577 5510 227 100 0 25 chr2 65460807 65460847 -187795736 + (TCC)n Simple_repeat Simple_repeat 1 39 0 675 126 0 67 chr2 65460847 65460966 -187795617 - FRAM SINE Alu -10 166 56 3292 236 39 9 chr2 65462063 65462987 -187793596 + L1MD2 LINE L1 5215 6165 -194 41110 48 2 1 chr2 65463061 65469200 -187787383 + L1PA4 LINE L1 2 6149 -6 524 180 140 0 chr2 65469200 65469350 -187787233 + L1MD3 LINE L1 7825 7995 0 262 234 97 45 chr2 65469432 65469586 -187786997 + MARNA DNA Mariner 27 188 -398 2185 130 0 0 chr2 65470540 65470840 -187785743 + AluSq SINE Alu 1 300 -13 225 211 0 0 chr2 65470989 65471041 -187785542 + CT-rich Low_complexity Low_complexity 3 54 0 522 281 83 69 chr2 65472339 65472879 -187783704 - L1MC/D LINE L1 -594 5562 5269 545 261 93 39 chr2 65472936 65473453 -187783130 - L1MC/D LINE L1 -978 5168 4624 1277 129 0 0 chr2 65473461 65473639 -187782944 + AluSg/x SINE Alu 76 253 -59 627 115 0 0 chr2 65473639 65473726 -187782857 + AluSp/q SINE Alu 195 281 -32 189 0 0 0 chr2 65473726 65473747 -187782836 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 978 164 0 18 chr2 65473842 65474013 -187782570 - AluSg/x SINE Alu -1 309 142 323 269 105 53 chr2 65474067 65474238 -187782345 - L1MC/D LINE L1 -1724 4422 4243 30066 111 12 39 chr2 65474243 65480553 -187776030 - L1PA7 LINE L1 -7 6147 12 466 339 71 45 chr2 65480673 65480947 -187775636 - L1MC/D LINE L1 -1989 4157 3871 2077 128 0 7 chr2 65480947 65481236 -187775347 - AluSq SINE Alu -26 287 1 466 339 71 45 chr2 65481236 65481297 -187775286 - L1MC/D LINE L1 -2275 3871 3813 307 278 52 100 chr2 65481331 65481680 -187774903 - L1MC/D LINE L1 -2310 3836 3505 1801 163 0 20 chr2 65481793 65482126 -187774457 + AluJo SINE Alu 1 327 0 211 221 15 29 chr2 65482319 65482387 -187774196 + T-rich Low_complexity Low_complexity 2 68 0 588 206 22 67 chr2 65482514 65482694 -187773889 - L1MB7 LINE L1 -15 6169 5998 249 333 57 21 chr2 65482694 65482835 -187773748 + MER5B DNA MER1_type 31 176 -2 23 33 0 0 chr2 65483434 65483464 -187773119 + AT_rich Low_complexity Low_complexity 1 30 0 5580 172 30 31 chr2 65483615 65483817 -187772766 - L1MB2 LINE L1 -2 6169 5968 1899 176 3 3 chr2 65483817 65484124 -187772459 - AluJb SINE Alu -5 307 1 5580 172 30 31 chr2 65484124 65485325 -187771258 - L1MB2 LINE L1 -203 5968 4765 2852 131 18 18 chr2 65485325 65485783 -187770800 + LTR22A LTR ERVK 1 458 0 5580 172 30 31 chr2 65485783 65486509 -187770074 - L1MB2 LINE L1 -1406 4765 4039 203 394 10 0 chr2 65486668 65486772 -187769811 + MIR SINE MIR 40 144 -64 788 179 34 50 chr2 65487191 65487370 -187769213 - MLT1E2-int LTR MaLR -119 1252 1077 531 57 19 47 chr2 65487370 65487476 -187769107 + (TCTCCC)n Simple_repeat Simple_repeat 1 103 0 10367 46 2 116 chr2 65487481 65489042 -187767541 + SVA Other Other 2 1384 -2 655 282 6 6 chr2 65489044 65489214 -187767369 - ERVL LTR ERVL -2743 3021 2852 1425 212 48 196 chr2 65489408 65489871 -187766712 - MLT1E2-int LTR MaLR -279 1092 814 2097 122 10 7 chr2 65489871 65490166 -187766417 - AluSc SINE Alu -13 296 1 1425 212 48 196 chr2 65490166 65490562 -187766021 - MLT1E2-int LTR MaLR -557 814 361 674 177 27 14 chr2 65490541 65490688 -187765895 - MLT1E2-int LTR MaLR -1208 163 15 * 413 272 18 9 chr2 65490701 65490815 -187765768 - MLT1E2 LTR MaLR 0 626 512 31378 112 16 56 chr2 65490818 65495346 -187761237 + L1PA7 LINE L1 15 4194 -1960 2028 85 48 7 chr2 65495346 65495658 -187760925 + AluY SINE Alu 1 323 0 31378 112 16 56 chr2 65495658 65497542 -187759041 + L1PA7 LINE L1 4194 6153 -1 952 238 20 24 chr2 65497576 65497864 -187758719 - MLT1E2 LTR MaLR -91 499 225 469 283 100 33 chr2 65497880 65497992 -187758591 - L1M4 LINE L1 -3199 2947 2844 201 74 0 0 chr2 65497992 65498019 -187758564 + (TG)n Simple_repeat Simple_repeat 2 28 0 469 283 100 33 chr2 65498019 65498305 -187758278 - L1M4 LINE L1 -3302 2844 2522 180 0 0 0 chr2 65501545 65501565 -187755018 + (TAA)n Simple_repeat Simple_repeat 3 22 0 12249 35 1 1 chr2 65502043 65503516 -187753067 - L1P LINE L1 -1847 4299 2827 43324 39 23 2 chr2 65503531 65509546 -187747037 - L1PA3 LINE L1 0 6155 7 596 14 0 0 chr2 65509566 65509635 -187746948 - L1P LINE L1 -3303 2843 2775 9266 40 0 3 chr2 65509635 65511465 -187745118 + L1PA4 LINE L1 4329 6155 0 263 323 8 39 chr2 65512996 65513123 -187743460 - LTR67 LTR ERVL 0 557 435 418 188 0 47 chr2 65513215 65513444 -187743139 + AluJb SINE Alu 5 297 -15 211 54 54 0 chr2 65513941 65513978 -187742605 + CT-rich Low_complexity Low_complexity 2 40 0 858 147 0 29 chr2 65514848 65514984 -187741599 - FLAM_C SINE Alu -1 132 1 851 269 108 58 chr2 65515539 65516105 -187740478 + MLT1G1 LTR MaLR 1 594 -1 276 30 0 0 chr2 65516534 65516567 -187740016 + (A)n Simple_repeat Simple_repeat 1 33 0 300 289 0 12 chr2 65517333 65517416 -187739167 - MIR3 SINE MIR -14 194 113 449 233 213 13 chr2 65517460 65517610 -187738973 + MER5A DNA MER1_type 10 189 0 417 335 74 5 chr2 65517638 65517853 -187738730 + MIR SINE MIR 21 250 -12 429 267 0 0 chr2 65517901 65518066 -187738517 + (CTA)n Simple_repeat Simple_repeat 1 165 0 28 0 0 0 chr2 65519589 65519617 -187736966 + AT_rich Low_complexity Low_complexity 1 28 0 180 77 0 0 chr2 65519617 65519643 -187736940 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 961 260 29 21 chr2 65519643 65519885 -187736698 - MIR SINE MIR -18 244 1 660 32 32 0 chr2 65521897 65521992 -187734591 + (TC)n Simple_repeat Simple_repeat 1 98 0 2013 171 71 6 chr2 65523195 65523534 -187733049 - MLT1A1 LTR MaLR 0 365 5 1954 122 3 21 chr2 65523905 65524212 -187732371 + AluSx SINE Alu 1 302 0 309 258 0 0 chr2 65524400 65524466 -187732117 - MER82 DNA MER2_type 0 653 588 1927 83 0 29 chr2 65524467 65524743 -187731840 + AluY SINE Alu 1 268 -43 1546 162 29 18 chr2 65524844 65525116 -187731467 - MER82 DNA MER2_type -378 275 1 2378 100 0 0 chr2 65525208 65525507 -187731076 + AluSx SINE Alu 1 299 -13 399 303 92 87 chr2 65526037 65526512 -187730071 - L2 LINE L2 -266 3006 2525 741 279 47 80 chr2 65526512 65526935 -187729648 - MLT1I LTR MaLR 0 409 1 399 303 92 87 chr2 65526935 65527109 -187729474 - L2 LINE L2 -747 2525 2353 282 268 268 28 chr2 65528869 65529011 -187727572 - MIR SINE MIR -38 224 49 446 295 42 12 chr2 65529783 65529840 -187726743 - MIR SINE MIR -57 205 151 1648 174 116 0 chr2 65529840 65530150 -187726433 - MER7A DNA MER2_type -1 345 2 446 295 42 12 chr2 65530150 65530258 -187726325 - MIR SINE MIR -111 151 35 186 43 0 0 chr2 65530659 65530682 -187725901 + (TG)n Simple_repeat Simple_repeat 2 24 0 820 195 0 0 chr2 65531269 65531397 -187725186 - FLAM_C SINE Alu -5 128 1 1556 174 52 14 chr2 65532235 65532522 -187724061 - AluJb SINE Alu -4 298 1 1343 165 40 103 chr2 65533358 65533679 -187722904 + AluJb SINE Alu 1 301 -11 22 0 0 0 chr2 65533800 65533822 -187722761 + AT_rich Low_complexity Low_complexity 1 22 0 6887 104 27 5 chr2 65533822 65534947 -187721636 - L1MA3 LINE L1 0 6305 5156 25 31 0 0 chr2 65535114 65535146 -187721437 + AT_rich Low_complexity Low_complexity 1 32 0 200 167 0 37 chr2 65535365 65535419 -187721164 + T-rich Low_complexity Low_complexity 2 53 0 287 345 18 18 chr2 65535466 65535576 -187721007 - MIR SINE MIR -132 130 21 289 295 40 121 chr2 65536079 65536499 -187720084 + L3 LINE CR1 1178 1563 -14 861 273 112 26 chr2 65537285 65537633 -187718950 - MLT1K LTR MaLR -8 580 203 2472 69 3 0 chr2 65537659 65537963 -187718620 + AluY SINE Alu 1 305 -6 243 170 0 0 chr2 65539047 65539094 -187717489 + GA-rich Low_complexity Low_complexity 4 50 0 2265 132 66 53 chr2 65539115 65539220 -187717363 - MLT1C LTR MaLR 0 467 365 1720 159 13 46 chr2 65539220 65539609 -187716974 + L1MA7 LINE L1 5916 6291 0 2265 132 66 53 chr2 65539609 65539958 -187716625 - MLT1C LTR MaLR -102 365 7 499 264 202 19 chr2 65541150 65541358 -187715225 - MIR SINE MIR -10 252 7 333 292 21 0 chr2 65541399 65541495 -187715088 + MIR3 SINE MIR 109 206 -2 22 0 0 0 chr2 65542610 65542632 -187713951 + AT_rich Low_complexity Low_complexity 1 22 0 2227 109 55 13 chr2 65542632 65543016 -187713567 - L1MA5A LINE L1 -3 6294 5895 29 0 0 25 chr2 65543628 65543641 -187712942 + AT_rich Low_complexity Low_complexity 1 13 -26 1916 117 0 74 chr2 65543641 65543950 -187712633 + AluSx SINE Alu 1 286 -26 29 0 0 25 chr2 65543950 65543976 -187712607 + AT_rich Low_complexity Low_complexity 13 39 0 2178 110 0 16 chr2 65544562 65544872 -187711711 + AluSg SINE Alu 1 305 -5 774 242 92 39 chr2 65545415 65545675 -187710908 - MLT1J LTR MaLR 0 511 238 502 257 53 13 chr2 65545722 65545874 -187710709 - MLT1J LTR MaLR -349 162 5 250 241 121 69 chr2 65545916 65546032 -187710551 - MIR3 SINE MIR -43 165 44 3711 164 42 71 chr2 65546177 65547021 -187709562 - L1MB7 LINE L1 -9 6175 5326 3985 89 60 10 chr2 65547021 65547637 -187708946 - L1MA3 LINE L1 0 6305 5659 3711 164 42 71 chr2 65547637 65547769 -187708814 - L1MB7 LINE L1 -858 5326 5192 2072 142 23 10 chr2 65547775 65548163 -187708420 - L1MA4 LINE L1 -14 6286 5894 622 165 10 0 chr2 65548275 65548372 -187708211 - AluJ/FLAM SINE Alu -214 98 1 267 152 0 0 chr2 65548480 65548526 -187708057 + CT-rich Low_complexity Low_complexity 1 46 0 1822 146 79 0 chr2 65548526 65548806 -187707777 - AluSg SINE Alu -8 302 1 351 174 0 0 chr2 65548806 65548860 -187707723 + T-rich Low_complexity Low_complexity 1 57 -12 2357 82 0 13 chr2 65548860 65549175 -187707408 - AluY SINE Alu 0 311 1 351 174 0 0 chr2 65549175 65549189 -187707394 + T-rich Low_complexity Low_complexity 56 69 0 411 289 35 0 chr2 65549952 65550066 -187706517 + L2 LINE L2 3195 3312 -1 767 189 105 21 chr2 65553021 65553211 -187703372 - MER3 DNA MER1_type -1 208 3 1464 125 94 3 chr2 65553519 65553816 -187702767 - MER33 DNA MER1_type 0 324 1 21 0 0 0 chr2 65554612 65554633 -187701950 + AT_rich Low_complexity Low_complexity 1 21 0 369 194 172 60 chr2 65555174 65555308 -187701275 - MIR SINE MIR -18 244 96 1362 120 97 142 chr2 65555405 65555714 -187700869 + AluJb SINE Alu 1 295 -17 183 139 0 0 chr2 65558319 65558355 -187698228 + (CGG)n Simple_repeat Simple_repeat 1 36 0 272 293 162 10 chr2 65560656 65560755 -187695828 - L2 LINE L2 -18 3254 3141 675 212 62 39 chr2 65560833 65561012 -187695571 + MIR SINE MIR 79 261 -1 257 329 67 71 chr2 65561066 65561720 -187694863 - L2 LINE L2 -222 3050 2390 43 0 0 0 chr2 65562862 65562905 -187693678 + AT_rich Low_complexity Low_complexity 1 43 0 322 252 261 0 chr2 65563386 65563497 -187693086 - L2 LINE L2 -630 2684 2545 439 151 0 65 chr2 65563547 65563640 -187692943 - L1ME2 LINE L1 -9 6155 6069 4057 273 126 10 chr2 65563654 65565201 -187691382 - L2 LINE L2 -781 2533 808 24 53 0 0 chr2 65565312 65565350 -187691233 + AT_rich Low_complexity Low_complexity 1 38 0 642 232 24 71 chr2 65565431 65565612 -187690971 - L2 LINE L2 -2508 806 639 1984 128 38 7 chr2 65565612 65565901 -187690682 - AluSx SINE Alu -14 298 1 642 232 24 71 chr2 65565901 65565973 -187690610 - L2 LINE L2 -2675 639 565 456 129 0 108 chr2 65566485 65566578 -187690005 + AluJb SINE Alu 35 117 -195 186 43 0 0 chr2 65566581 65566604 -187689979 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 586 218 106 39 chr2 65566845 65567024 -187689559 + MIR SINE MIR 72 262 0 2320 106 0 0 chr2 65567469 65567771 -187688812 - AluY SINE Alu -9 302 1 21 0 0 0 chr2 65567825 65567846 -187688737 + AT_rich Low_complexity Low_complexity 1 21 0 893 318 46 18 chr2 65567846 65568280 -187688303 + MLT1J LTR MaLR 66 511 0 681 160 16 16 chr2 65569297 65569422 -187687161 - FLAM_C SINE Alu -16 127 3 27 73 0 0 chr2 65570053 65570108 -187686475 + AT_rich Low_complexity Low_complexity 1 55 0 1034 202 5 5 chr2 65570635 65570843 -187685740 - MER3 DNA MER1_type -1 208 1 260 313 61 15 chr2 65570850 65570981 -187685602 - MER5A DNA MER1_type 0 189 53 1572 153 68 14 chr2 65571337 65571618 -187684965 - AluJb SINE Alu -11 301 6 1338 192 36 34 chr2 65571805 65571927 -187684656 + MER119 DNA MER1_type 1 121 -462 1958 129 48 15 chr2 65571927 65572259 -187684324 - MER2 DNA MER2_type -1 343 1 1338 192 36 34 chr2 65572259 65572620 -187683963 + MER119 DNA MER1_type 121 582 -1 331 88 35 0 chr2 65573030 65573087 -187683496 - L1MD3 LINE L1 -9 7986 7928 954 114 60 6 chr2 65573087 65573253 -187683330 + MER30 DNA MER1_type 1 175 -55 2012 177 70 92 chr2 65573266 65573782 -187682801 - L1MD3 LINE L1 -45 7934 7223 498 222 60 0 chr2 65573782 65573899 -187682684 - MLT1F1 LTR MaLR -443 124 1 2012 177 70 92 chr2 65573899 65574161 -187682422 - L1MD3 LINE L1 -756 7223 6957 2302 175 40 68 chr2 65574242 65574487 -187682096 - L1MD3 LINE L1 0 8040 7790 2014 120 28 7 chr2 65574487 65574778 -187681805 - AluY SINE Alu -14 297 1 2302 175 40 68 chr2 65574778 65575208 -187681375 - L1MD3 LINE L1 -250 7790 7399 * 11640 195 31 22 chr2 65575202 65577037 -187679546 - L1PA13 LINE L1 -3336 3461 1555 1651 155 132 26 chr2 65577037 65577341 -187679242 + MER1B DNA MER1_type 2 337 0 11640 195 31 22 chr2 65577341 65578911 -187677672 - L1PA13 LINE L1 -5242 1555 1 661 102 0 0 chr2 65578994 65579092 -187677491 - HY1 scRNA scRNA -2 110 13 251 301 79 15 chr2 65579096 65579223 -187677360 - L1MC4a LINE L1 -1550 6676 6559 2397 82 0 0 chr2 65579223 65579516 -187677067 - AluSg SINE Alu -17 293 1 251 301 79 15 chr2 65579516 65579654 -187676929 - L1MC4a LINE L1 -1667 6559 6394 2332 133 84 32 chr2 65579654 65580120 -187676463 - L1MB8 LINE L1 0 6178 5689 2354 177 18 9 chr2 65580128 65580579 -187676004 - LTR35 LTR ERV1 0 618 164 1789 171 52 46 chr2 65580608 65581361 -187675222 - L1MB8 LINE L1 -529 5655 4907 635 212 51 77 chr2 65581365 65581639 -187674944 - L1MC4a LINE L1 -1806 6420 6154 680 18 72 36 chr2 65581645 65581812 -187674771 + (TATAA)n Simple_repeat Simple_repeat 5 177 0 265 120 20 0 chr2 65581812 65581862 -187674721 + (TA)n Simple_repeat Simple_repeat 1 51 0 672 41 64 23 chr2 65581862 65582033 -187674550 + (TATAA)n Simple_repeat Simple_repeat 1 178 0 1188 186 25 8 chr2 65582065 65582301 -187674282 - L1MC4a LINE L1 -2152 6074 5835 673 188 0 0 chr2 65582301 65582418 -187674165 - Tigger1 DNA MER2_type 0 2418 2302 2154 146 35 12 chr2 65582465 65582982 -187673601 - L1MC2 LINE L1 -2 6342 5695 452 233 3 0 chr2 65582998 65583335 -187673248 + GA-rich Low_complexity Low_complexity 1 338 0 494 216 32 0 chr2 65583343 65583468 -187673115 - L1MC4a LINE L1 -1539 5025 4897 622 169 0 16 chr2 65583589 65583772 -187672811 + GA-rich Low_complexity Low_complexity 1 180 0 249 113 19 38 chr2 65583772 65583825 -187672758 + (CAGA)n Simple_repeat Simple_repeat 3 54 0 584 184 6 0 chr2 65583835 65583932 -187672651 + GA-rich Low_complexity Low_complexity 1 101 -79 321 47 0 0 chr2 65583932 65583975 -187672608 + (CA)n Simple_repeat Simple_repeat 2 44 0 584 184 6 0 chr2 65583975 65584056 -187672527 + GA-rich Low_complexity Low_complexity 101 180 0 2876 191 54 52 chr2 65584068 65584926 -187671657 - L1MB8 LINE L1 -1539 4607 3749 * 3129 196 98 49 chr2 65584924 65585483 -187671100 - L1MCb LINE L1 -4546 2018 1488 2304 136 83 5 chr2 65585483 65585880 -187670703 + MSTA LTR MaLR 1 428 0 3129 196 98 49 chr2 65585880 65587188 -187669395 - L1MCb LINE L1 -5076 1488 4 412 276 116 55 chr2 65587239 65587514 -187669069 - L1M4 LINE L1 -913 5233 4942 9241 125 39 42 chr2 65587581 65587878 -187668705 - L1MCa LINE L1 -3950 2476 2180 811 144 0 0 chr2 65587878 65587996 -187668587 - FLAM_C SINE Alu -15 118 1 1766 168 21 3 chr2 65588006 65588297 -187668286 - AluJb SINE Alu -16 296 1 9241 125 39 42 chr2 65588297 65589327 -187667256 - L1MCa LINE L1 -4255 2171 1139 2193 117 10 0 chr2 65589327 65589626 -187666957 - AluSx SINE Alu -10 302 1 9241 125 39 42 chr2 65589626 65590739 -187665844 - L1MCa LINE L1 -5287 1139 60 696 122 94 122 chr2 65590748 65590874 -187665709 - L1M4 LINE L1 -576 5608 5487 1722 191 3 7 chr2 65590874 65591167 -187665416 - AluJo SINE Alu -20 292 1 696 122 94 122 chr2 65591167 65591220 -187665363 - L1M4 LINE L1 -697 5487 5434 511 300 114 51 chr2 65591206 65591732 -187664851 - HAL1 LINE L1 -152 2355 1797 * 550 259 198 24 chr2 65591731 65592110 -187664473 - HAL1 LINE L1 -1276 1231 787 231 276 187 24 chr2 65592128 65592251 -187664332 - MIR SINE MIR -8 254 112 1807 154 33 3 chr2 65592763 65593062 -187663521 + AluJo SINE Alu 1 308 -4 189 0 0 0 chr2 65593093 65593114 -187663469 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1015 273 77 24 chr2 65594290 65594827 -187661756 + L2 LINE L2 2600 3168 -145 297 256 128 51 chr2 65595949 65596066 -187660517 - MIR3 SINE MIR -42 166 41 1513 182 83 19 chr2 65596070 65596262 -187660321 - MER2 DNA MER2_type 0 345 122 2063 147 17 20 chr2 65596262 65596610 -187659973 + MER7A DNA MER2_type 2 346 0 1513 182 83 19 chr2 65596610 65596741 -187659842 - MER2 DNA MER2_type -223 122 1 21 36 0 0 chr2 65597173 65597201 -187659382 + AT_rich Low_complexity Low_complexity 1 28 0 256 283 104 0 chr2 65597357 65597463 -187659120 - L1ME4a LINE L1 -56 6065 5949 313 277 30 0 chr2 65597489 65597590 -187658993 - L1ME4a LINE L1 -244 5877 5774 484 214 120 8 chr2 65597809 65597926 -187658657 + L2 LINE L2 3136 3265 -7 7967 177 15 3 chr2 65598307 65599785 -187656798 - L1P LINE L1 -1832 4314 2819 1876 167 7 3 chr2 65599786 65600085 -187656498 - AluJb SINE Alu -10 302 3 859 138 8 0 chr2 65600092 65600222 -187656361 - AluJb SINE Alu -179 133 3 23 54 0 0 chr2 65600248 65600285 -187656298 + AT_rich Low_complexity Low_complexity 1 37 0 2136 151 12 60 chr2 65600587 65601003 -187655580 + MSTD LTR MaLR 1 396 0 6974 225 22 47 chr2 65601005 65602782 -187653801 + MSTD-int LTR MaLR 2 1735 0 2113 178 34 0 chr2 65602782 65603165 -187653418 + MSTD LTR MaLR 1 396 0 515 125 0 0 chr2 65604432 65604512 -187652071 - MADE1 DNA Mariner 0 80 1 198 263 18 53 chr2 65604558 65604615 -187651968 + MIR SINE MIR 19 73 -135 212 235 59 0 chr2 65607045 65607096 -187649487 - L2 LINE L2 -3 3310 3257 318 290 15 11 chr2 65607103 65607239 -187649344 - MER5A DNA MER1_type -3 186 3 192 40 0 0 chr2 65607462 65607487 -187649096 + (CA)n Simple_repeat Simple_repeat 2 26 0 2402 122 6 0 chr2 65607487 65607840 -187648743 + L1PB1 LINE L1 5789 6146 -5 1428 193 68 17 chr2 65607914 65608210 -187648373 - AluJo SINE Alu -1 311 1 2397 81 0 3 chr2 65609090 65609387 -187647196 + AluSx SINE Alu 1 296 -16 1442 139 0 5 chr2 65610820 65611028 -187645555 - AluSx SINE Alu -105 207 1 24 32 0 0 chr2 65611088 65611119 -187645464 + AT_rich Low_complexity Low_complexity 1 31 0 1131 72 0 20 chr2 65611172 65611324 -187645259 + AluY SINE Alu 151 299 -12 1968 141 10 0 chr2 65611409 65611699 -187644884 - AluSx SINE Alu -16 296 4 2175 117 7 0 chr2 65612701 65612999 -187643584 - AluSx SINE Alu -12 300 1 1273 191 21 8 chr2 65613274 65613510 -187643073 + MER8 DNA MER2_type 1 239 0 219 294 188 38 chr2 65614034 65614194 -187642389 + MIR3 SINE MIR 15 198 -10 361 284 223 26 chr2 65615988 65616369 -187640214 + L2 LINE L2 2201 2656 -658 229 257 140 15 chr2 65616433 65616569 -187640014 - L1ME4a LINE L1 -1 6120 5968 336 292 35 35 chr2 65616628 65616799 -187639784 - L1ME4a LINE L1 -288 5833 5663 2193 81 3 7 chr2 65616867 65617175 -187639408 + L1PA5 LINE L1 5846 6152 -2 418 287 8 0 chr2 65617182 65617304 -187639279 + L1ME2 LINE L1 6033 6155 -9 1660 153 14 28 chr2 65617492 65617774 -187638809 - AluJo SINE Alu -19 293 16 892 205 49 13 chr2 65618093 65618319 -187638264 - MSTD LTR MaLR 0 396 122 336 292 35 35 chr2 65618518 65618689 -187637894 - L1ME4a LINE L1 -288 5833 5663 1949 116 30 0 chr2 65618757 65619060 -187637523 + L1PA16 LINE L1 5846 6157 -9 6989 133 96 98 chr2 65619079 65619252 -187637331 + L1MCa LINE L1 324 496 -5930 2425 92 0 0 chr2 65619252 65619557 -187637026 - AluSg SINE Alu -5 305 1 6989 133 96 98 chr2 65619557 65620491 -187636092 + L1MCa LINE L1 496 1431 -4995 668 169 16 0 chr2 65620491 65620615 -187635968 - FLAM_C SINE Alu -3 140 15 6989 133 96 98 chr2 65620615 65620997 -187635586 + L1MCa LINE L1 1431 1934 -4492 2272 105 3 3 chr2 65620997 65621302 -187635281 - AluSp SINE Alu -8 305 1 6989 133 96 98 chr2 65621302 65621393 -187635190 + L1MCa LINE L1 1934 2024 -4402 419 171 14 0 chr2 65621393 65621462 -187635121 + Tigger2 DNA MER2_type 3 72 -2646 234 254 109 0 chr2 65621462 65621517 -187635066 - MER2 DNA MER2_type -1 344 284 * 442 261 0 0 chr2 65621496 65621588 -187634995 - MER8 DNA MER2_type -62 177 86 290 172 138 0 chr2 65621569 65621627 -187634956 - MER2 DNA MER2_type -278 67 2 * 1869 155 18 93 chr2 65621627 65621906 -187634677 + L1MCa LINE L1 2038 2336 -4189 1664 184 31 0 chr2 65621906 65622200 -187634383 + AluJo SINE Alu 1 303 -9 1869 155 18 93 chr2 65622200 65622284 -187634299 + L1MCa LINE L1 2336 2425 -4100 1956 157 0 13 chr2 65622284 65622584 -187633999 + AluJb SINE Alu 1 296 -16 1869 155 18 93 chr2 65622584 65622752 -187633831 + L1MCa LINE L1 2425 2577 -3948 1797 176 7 7 chr2 65622753 65623043 -187633540 + AluSx SINE Alu 3 292 -20 249 228 88 9 chr2 65623062 65623176 -187633407 - L1ME4a LINE L1 -18 6103 5981 464 251 114 29 chr2 65623192 65623535 -187633048 - L1ME4a LINE L1 -187 5934 5563 2312 117 6 29 chr2 65623535 65623876 -187632707 - MER1B DNA MER1_type 0 339 7 3805 256 110 69 chr2 65624651 65625064 -187631519 + L2 LINE L2 1454 1849 -1464 466 156 0 0 chr2 65625064 65625141 -187631442 - FLAM_A SINE Alu -55 77 1 3805 256 110 69 chr2 65625141 65626415 -187630168 + L2 LINE L2 1849 3280 -33 186 43 0 0 chr2 65626426 65626449 -187630134 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 380 255 10 10 chr2 65626458 65626560 -187630023 + MIR SINE MIR 161 262 0 25 31 0 0 chr2 65628436 65628468 -187628115 + AT_rich Low_complexity Low_complexity 1 32 0 303 200 71 14 chr2 65628474 65628535 -187628048 - L2 LINE L2 -1 3271 3207 425 274 143 16 chr2 65628535 65628769 -187627814 + MIR SINE MIR 3 262 0 1754 136 6 31 chr2 65630024 65630341 -187626242 + L1PA14 LINE L1 5851 6159 -2 198 143 0 0 chr2 65630772 65630807 -187625776 + (TATG)n Simple_repeat Simple_repeat 4 38 0 32 0 0 0 chr2 65630808 65630840 -187625743 + AT_rich Low_complexity Low_complexity 1 32 0 343 274 0 24 chr2 65630866 65630950 -187625633 + L2 LINE L2 3186 3267 -5 1995 131 10 0 chr2 65630991 65631281 -187625302 + AluSq SINE Alu 1 293 -20 395 244 9 0 chr2 65631281 65631396 -187625187 + GA-rich Low_complexity Low_complexity 1 116 0 280 265 12 24 chr2 65631737 65631820 -187624763 + MIR SINE MIR 35 116 -146 203 316 37 88 chr2 65632546 65632682 -187623901 + L2 LINE L2 3185 3313 0 1834 158 3 7 chr2 65632755 65633047 -187623536 + AluSx SINE Alu 22 312 0 1241 129 0 0 chr2 65633255 65633426 -187623157 + AluSx SINE Alu 1 171 -141 792 132 6 92 chr2 65633526 65633684 -187622899 + L1P5 LINE L1 5648 5791 -360 564 89 0 0 chr2 65633684 65633763 -187622820 + (CA)n Simple_repeat Simple_repeat 2 80 0 792 132 6 92 chr2 65633763 65633778 -187622805 + L1P5 LINE L1 5791 5806 -345 1371 77 6 0 chr2 65633794 65633962 -187622621 - AluSg SINE Alu -140 170 2 1528 205 27 5 chr2 65633966 65634342 -187622241 - L1P LINE L1 -783 5363 4980 945 141 0 170 chr2 65635905 65636175 -187620408 + Tigger1 DNA MER2_type 1 224 -2194 221 136 0 23 chr2 65636280 65636324 -187620259 + (GAAA)n Simple_repeat Simple_repeat 2 44 0 407 214 22 45 chr2 65636453 65636542 -187620041 - L2 LINE L2 0 3313 3227 1245 184 4 9 chr2 65636547 65636775 -187619808 + AluJo SINE Alu 78 304 -8 27 0 0 0 chr2 65637047 65637074 -187619509 + AT_rich Low_complexity Low_complexity 1 27 0 215 179 51 0 chr2 65637563 65637602 -187618981 - L2 LINE L2 -12 3301 3261 * 829 234 67 42 chr2 65637568 65637807 -187618776 - MIR SINE MIR -13 249 5 466 245 105 42 chr2 65638193 65638336 -187618247 + MIR SINE MIR 63 214 -48 1796 162 14 10 chr2 65638883 65639179 -187617404 - AluJo SINE Alu -15 297 1 21 36 0 0 chr2 65639187 65639215 -187617368 + AT_rich Low_complexity Low_complexity 1 28 0 248 201 23 167 chr2 65639414 65639588 -187616995 + MER104 DNA Tc2 29 177 -3 1700 168 13 20 chr2 65640166 65640469 -187616114 + AluJo SINE Alu 1 301 -11 399 387 75 20 chr2 65641956 65642209 -187614374 - L2 LINE L2 -2 3270 3004 947 204 42 81 chr2 65642217 65642501 -187614082 + MER46C DNA MER2_type 5 277 -61 273 289 35 53 chr2 65642947 65643061 -187613522 - MIR SINE MIR -90 118 7 2223 114 88 23 chr2 65643400 65643752 -187612831 - THE1C LTR MaLR 0 375 1 8659 114 35 4 chr2 65643752 65644990 -187611593 - THE1C-int LTR MaLR 0 1580 305 356 313 75 95 chr2 65645358 65645652 -187610931 - L2 LINE L2 -59 3213 2926 245 242 55 55 chr2 65645795 65645886 -187610697 - MER5B DNA MER1_type -2 176 86 199 313 15 0 chr2 65645905 65645972 -187610611 - L2 LINE L2 -559 2755 2688 673 219 61 73 chr2 65645976 65646222 -187610361 + MER112 DNA MER1_type 7 249 -11 191 323 52 81 chr2 65646234 65646581 -187610002 - L2 LINE L2 -639 2675 2339 29 47 0 0 chr2 65646606 65646649 -187609934 + AT_rich Low_complexity Low_complexity 1 43 0 655 261 72 18 chr2 65647252 65647507 -187609076 - MLT1G LTR MaLR -344 246 23 25 0 0 0 chr2 65649492 65649517 -187607066 + AT_rich Low_complexity Low_complexity 1 25 0 310 303 0 97 chr2 65650537 65650692 -187605891 - MER5B DNA MER1_type 0 178 39 22 0 0 0 chr2 65650784 65650806 -187605777 + AT_rich Low_complexity Low_complexity 1 22 0 255 344 11 11 chr2 65650894 65650984 -187605599 + MIR SINE MIR 36 125 -83 600 307 14 14 chr2 65650984 65651196 -187605387 + L1ME LINE L1 5449 5660 -502 211 270 63 0 chr2 65651204 65651267 -187605316 + MIR SINE MIR 194 260 -2 1747 89 31 15 chr2 65651651 65651910 -187604673 + L1MA2 LINE L1 6042 6304 0 1719 151 36 4 chr2 65652065 65652344 -187604239 - AluJo SINE Alu -24 288 1 313 321 99 0 chr2 65652738 65652869 -187603714 - L1ME3A LINE L1 -38 6132 5989 2184 132 81 8 chr2 65652945 65652969 -187603614 + L1MB4 LINE L1 5757 5778 -402 396 0 0 0 chr2 65652969 65653013 -187603570 + (TA)n Simple_repeat Simple_repeat 2 45 0 216 0 0 0 chr2 65653016 65653040 -187603543 + (CA)n Simple_repeat Simple_repeat 2 25 0 2184 132 81 8 chr2 65653040 65653405 -187603178 + L1MB4 LINE L1 5779 6179 -1 2363 112 0 3 chr2 65653508 65653822 -187602761 - AluSq SINE Alu 0 313 1 1051 285 50 22 chr2 65653822 65653966 -187602617 - L1ME3A LINE L1 -295 5875 5736 2214 110 7 26 chr2 65653966 65654275 -187602308 - AluSx SINE Alu -9 303 1 1051 285 50 22 chr2 65654275 65654491 -187602092 - L1ME3A LINE L1 -434 5736 5505 400 293 124 25 chr2 65654526 65654768 -187601815 - L1ME3A LINE L1 -2291 3855 3590 263 315 27 0 chr2 65654808 65654957 -187601626 - L1ME3A LINE L1 -2739 3407 3255 802 181 0 0 chr2 65655205 65655338 -187601245 - AluJb SINE Alu -179 133 1 1529 246 47 13 chr2 65655701 65656188 -187600395 + L1ME2 LINE L1 5497 6023 -141 41973 63 5 4 chr2 65656192 65661778 -187594805 + L1P2 LINE L1 1 5588 -567 408 296 52 7 chr2 65664113 65664248 -187592335 - MIR3 SINE MIR -1 207 67 284 170 0 0 chr2 65665463 65665510 -187591073 - MER66A LTR ERV1 -142 336 290 196 304 18 0 chr2 65665606 65665662 -187590921 + L2 LINE L2 3252 3308 -5 23 0 0 0 chr2 65666067 65666090 -187590493 + AT_rich Low_complexity Low_complexity 1 23 0 230 282 52 58 chr2 65668272 65668446 -187588137 - HAL1 LINE L1 -2 2505 2333 22 0 0 0 chr2 65669943 65669965 -187586618 + AT_rich Low_complexity Low_complexity 1 22 0 248 223 107 62 chr2 65670870 65670982 -187585601 + MIR SINE MIR 50 166 -96 2053 133 7 3 chr2 65671201 65671503 -187585080 + AluSx SINE Alu 1 303 -9 553 217 127 19 chr2 65671607 65671764 -187584819 + MIR SINE MIR 63 236 -26 2532 65 0 0 chr2 65671839 65672146 -187584437 + AluY SINE Alu 1 307 -4 192 152 0 0 chr2 65674069 65674102 -187582481 + C-rich Low_complexity Low_complexity 4 36 0 293 323 6 51 chr2 65674133 65674291 -187582292 + C-rich Low_complexity Low_complexity 5 155 0 873 54 0 0 chr2 65674986 65675097 -187581486 + (A)n Simple_repeat Simple_repeat 1 111 0 346 276 32 8 chr2 65675097 65675220 -187581363 + L1M4 LINE L1 3073 3198 -2948 380 187 30 15 chr2 65675501 65675635 -187580948 + A-rich Low_complexity Low_complexity 5 140 0 21 0 0 0 chr2 65675714 65675735 -187580848 + GC_rich Low_complexity Low_complexity 1 21 0 186 80 60 20 chr2 65676376 65676426 -187580157 + (CTCA)n Simple_repeat Simple_repeat 1 52 0 271 309 10 10 chr2 65676458 65676555 -187580028 + CT-rich Low_complexity Low_complexity 1 97 0 269 277 0 54 chr2 65680389 65680537 -187576046 + GA-rich Low_complexity Low_complexity 1 140 0 206 319 22 22 chr2 65680595 65680686 -187575897 + GA-rich Low_complexity Low_complexity 4 94 0 252 254 0 28 chr2 65681170 65681241 -187575342 + G-rich Low_complexity Low_complexity 1 69 0 2508 188 27 27 chr2 65683306 65683766 -187572817 - L1MD1 LINE L1 -382 5860 5400 1673 199 77 20 chr2 65683766 65684118 -187572465 - MLT1A2 LTR MaLR -2 372 1 2508 188 27 27 chr2 65684118 65684249 -187572334 - L1MD1 LINE L1 -842 5400 5271 407 300 0 18 chr2 65684262 65684372 -187572211 + MER20 DNA MER1_type 4 111 -108 775 278 47 27 chr2 65684377 65684676 -187571907 - L1M4 LINE L1 -2555 3591 3287 186 43 0 0 chr2 65684913 65684936 -187571647 + (GGGTG)n Simple_repeat Simple_repeat 3 25 0 22 0 0 0 chr2 65685448 65685470 -187571113 + AT_rich Low_complexity Low_complexity 1 22 0 301 229 100 53 chr2 65685897 65685963 -187570620 - L1M4 LINE L1 -3230 2916 2855 1650 126 61 7 chr2 65685963 65686241 -187570342 - AluSg SINE Alu -17 293 1 301 229 100 53 chr2 65686241 65686344 -187570239 - L1M4 LINE L1 -3291 2855 2739 * 507 163 0 0 chr2 65686342 65686428 -187570155 - L1 LINE L1 -1946 4200 4115 2648 171 2 0 chr2 65686431 65686904 -187569679 + L1P LINE L1 4183 4656 -1490 1920 112 87 0 chr2 65686904 65687181 -187569402 + AluSg SINE Alu 1 301 -9 1383 201 0 4 chr2 65687181 65687430 -187569153 + L1P LINE L1 3888 4135 -2011 11783 126 102 38 chr2 65687616 65689708 -187566875 + Tigger1 DNA MER2_type 192 2418 0 1016 243 30 13 chr2 65689710 65689945 -187566638 - MER8 DNA MER2_type 0 239 1 338 301 94 24 chr2 65689998 65690211 -187566372 - L1M4 LINE L1 -3703 2443 2216 42666 35 22 2 chr2 65690485 65696512 -187560071 + L1PA2 LINE L1 1 6155 0 233 93 70 0 chr2 65696735 65696778 -187559805 + T-rich Low_complexity Low_complexity 3 48 0 1404 189 20 95 chr2 65696864 65697100 -187559483 - MLT1A1 LTR MaLR 0 365 168 2229 103 7 0 chr2 65697100 65697390 -187559193 - AluSx SINE Alu -20 292 1 1404 189 20 95 chr2 65697390 65697544 -187559039 - MLT1A1 LTR MaLR -197 168 4 227 328 34 76 chr2 65698154 65698273 -187558310 + L2 LINE L2 3200 3313 0 475 186 12 0 chr2 65700706 65700792 -187555791 + AluJb SINE Alu 120 206 -106 29 28 0 0 chr2 65700792 65700828 -187555755 + AT_rich Low_complexity Low_complexity 1 36 0 3094 222 66 40 chr2 65701352 65702559 -187554024 + L1ME2 LINE L1 3802 4977 -1187 741 195 8 0 chr2 65702559 65702687 -187553896 + FLAM_A SINE Alu 1 129 -4 3094 222 66 40 chr2 65702687 65703081 -187553502 + L1ME2 LINE L1 4977 5359 -805 2200 111 7 13 chr2 65703081 65703387 -187553196 - AluSx SINE Alu -7 305 2 3094 222 66 40 chr2 65703387 65703909 -187552674 + L1ME2 LINE L1 5359 6140 -24 797 220 116 131 chr2 65704010 65704528 -187552055 + MLT1F LTR MaLR 1 510 -32 211 213 0 0 chr2 65704552 65704617 -187551966 + (CATA)n Simple_repeat Simple_repeat 1 65 0 223 302 47 35 chr2 65704707 65704793 -187551790 - L2 LINE L2 0 3272 3186 375 320 149 39 chr2 65704809 65705118 -187551465 - L2 LINE L2 -954 2360 2018 230 105 123 18 chr2 65705804 65705861 -187550722 - L1ME4a LINE L1 -2 6119 6057 187 121 30 0 chr2 65706085 65706118 -187550465 - L2 LINE L2 0 3313 3280 202 330 19 19 chr2 65706214 65706320 -187550263 + L2 LINE L2 2748 2853 -461 204 211 88 18 chr2 65706558 65706615 -187549968 + L2 LINE L2 3161 3221 -92 21 36 0 0 chr2 65707411 65707439 -187549144 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr2 65707635 65707665 -187548918 + AT_rich Low_complexity Low_complexity 1 30 0 1132 121 0 0 chr2 65708154 65708311 -187548272 - Tigger1 DNA MER2_type -3 2415 2259 * 4491 103 42 65 chr2 65708309 65709089 -187547494 - Tigger1 DNA MER2_type -547 1871 1110 3719 142 36 5 chr2 65709122 65709755 -187546828 - Tigger1 DNA MER2_type -1600 818 166 4562 206 53 101 chr2 65709755 65711716 -187544867 + MER52A LTR ERV1 1 1755 0 628 162 19 0 chr2 65711720 65711825 -187544758 - Tigger1 DNA MER2_type -2253 165 59 943 194 72 103 chr2 65711829 65712206 -187544377 + MLT1D LTR MaLR 93 457 -48 250 264 178 8 chr2 65712288 65712417 -187544166 + L2 LINE L2 3163 3313 0 22 56 0 0 chr2 65713786 65713822 -187542761 + AT_rich Low_complexity Low_complexity 1 36 0 2285 96 3 3 chr2 65715213 65715514 -187541069 + AluSp SINE Alu 1 301 -12 285 282 73 64 chr2 65715537 65715647 -187540936 - MIR SINE MIR -56 152 42 35 54 0 0 chr2 65715955 65716011 -187540572 + AT_rich Low_complexity Low_complexity 1 56 0 2319 96 0 0 chr2 65716130 65716433 -187540150 - AluSg SINE Alu -7 303 1 1975 143 7 13 chr2 65716467 65716775 -187539808 + AluSx SINE Alu 1 306 -6 2247 79 0 30 chr2 65717332 65717636 -187538947 + AluSq SINE Alu 1 295 -18 2275 78 0 7 chr2 65718006 65718288 -187538295 + AluSx SINE Alu 1 280 -32 696 126 7 105 chr2 65718319 65718462 -187538121 + AluJb SINE Alu 3 131 -181 207 88 0 0 chr2 65718803 65718837 -187537746 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 2057 143 0 3 chr2 65718846 65719154 -187537429 - AluSx SINE Alu -5 307 1 808 231 0 0 chr2 65719159 65719315 -187537268 - FRAM SINE Alu -20 156 1 192 216 137 20 chr2 65720425 65720476 -187536107 + L3 LINE CR1 910 966 -611 3135 255 75 43 chr2 65720597 65721916 -187534667 + L1ME1 LINE L1 34 1394 -5002 240 284 0 0 chr2 65721928 65721995 -187534588 + L1ME1 LINE L1 1518 1584 -4812 572 256 87 12 chr2 65722043 65722285 -187534298 + L1ME1 LINE L1 1731 1990 -4406 3122 231 61 41 chr2 65722304 65723099 -187533484 + L1ME1 LINE L1 4271 5049 -1186 2077 123 0 13 chr2 65723099 65723399 -187533184 + AluSq SINE Alu 1 296 -17 3122 231 61 41 chr2 65723399 65723672 -187532911 + L1ME1 LINE L1 5049 5315 -920 1496 200 10 30 chr2 65723672 65723967 -187532616 + AluJo SINE Alu 1 289 -23 3122 231 61 41 chr2 65723967 65724812 -187531771 + L1ME1 LINE L1 5315 6230 -5 28 29 0 0 chr2 65724945 65724980 -187531603 + AT_rich Low_complexity Low_complexity 1 35 0 403 429 12 0 chr2 65725192 65725432 -187531151 + L3 LINE CR1 1019 1261 -316 2256 106 3 7 chr2 65725439 65725742 -187530841 + AluSx SINE Alu 1 302 -10 191 125 25 0 chr2 65725742 65725782 -187530801 + (TA)n Simple_repeat Simple_repeat 1 41 0 28 61 0 0 chr2 65727443 65727492 -187529091 + AT_rich Low_complexity Low_complexity 1 49 0 1161 195 4 8 chr2 65727596 65727852 -187528731 - L1MB7 LINE L1 -19 6165 5911 931 233 61 4 chr2 65728051 65728296 -187528287 + L1MEd LINE L1 587 845 -5274 567 274 138 17 chr2 65728335 65728973 -187527610 + L1MEd LINE L1 921 1746 -744 15312 209 32 35 chr2 65729953 65731553 -187525030 + L1PA15 LINE L1 1079 2681 -4135 1788 154 185 6 chr2 65731553 65731916 -187524667 - MSTA LTR MaLR 0 428 1 15312 209 32 35 chr2 65731916 65733733 -187522850 + L1PA15 LINE L1 2681 4501 -2315 2119 119 0 29 chr2 65733733 65734045 -187522538 + AluSx SINE Alu 1 303 -9 15312 209 32 35 chr2 65734045 65734553 -187522030 + L1PA15 LINE L1 4501 5009 -1807 405 0 0 0 chr2 65734553 65734598 -187521985 + (CA)n Simple_repeat Simple_repeat 2 46 0 15312 209 32 35 chr2 65734598 65736422 -187520161 + L1PA15 LINE L1 5009 6815 -1 21 0 0 0 chr2 65736425 65736446 -187520137 + AT_rich Low_complexity Low_complexity 1 21 0 261 104 0 75 chr2 65736447 65736514 -187520069 + (GGAAA)n Simple_repeat Simple_repeat 4 65 0 332 256 45 39 chr2 65737069 65737225 -187519358 - L1M4 LINE L1 -6370 172 16 2473 78 3 0 chr2 65737607 65737916 -187518667 + AluSp SINE Alu 1 310 -3 326 141 0 16 chr2 65737985 65738049 -187518534 + (CA)n Simple_repeat Simple_repeat 2 64 0 421 294 68 14 chr2 65738066 65738212 -187518371 - MIR SINE MIR -108 154 1 347 175 63 0 chr2 65738591 65738654 -187517929 + FLAM_A SINE Alu 19 85 -48 1620 171 3 25 chr2 65738688 65738974 -187517609 + AluJb SINE Alu 1 280 -32 24 0 0 0 chr2 65740712 65740736 -187515847 + AT_rich Low_complexity Low_complexity 1 24 0 28 0 0 0 chr2 65741891 65741919 -187514664 + AT_rich Low_complexity Low_complexity 1 28 0 329 307 102 7 chr2 65741940 65742077 -187514506 - MLT1J LTR MaLR -4 507 358 588 210 36 22 chr2 65742207 65742345 -187514238 - MLT1J LTR MaLR -368 143 4 1301 200 48 11 chr2 65742462 65742732 -187513851 + AluJo SINE Alu 1 280 -32 717 264 6 0 chr2 65743051 65743225 -187513358 + MER96 DNA MER1_type 1 175 0 541 277 35 0 chr2 65743913 65744054 -187512529 + MER96 DNA MER1_type? 3 148 -27 1067 92 0 0 chr2 65744058 65744199 -187512384 - AluSg/x SINE Alu 0 312 172 6093 140 2 70 chr2 65744208 65744966 -187511617 - L1P LINE L1 -815 5331 4686 1946 109 87 0 chr2 65744966 65745242 -187511341 - AluSg SINE Alu -10 300 1 6093 140 2 70 chr2 65745242 65745713 -187510870 - L1P LINE L1 -1460 4686 4185 493 163 0 0 chr2 65745718 65745804 -187510779 + L1P LINE L1 4115 4200 -1946 332 205 99 123 chr2 65745814 65745905 -187510678 + L1M4 LINE L1 2750 2837 -3309 2024 91 8 0 chr2 65745905 65746168 -187510415 + AluSg SINE Alu 1 265 -45 332 205 99 123 chr2 65746168 65746247 -187510336 + L1M4 LINE L1 2837 2916 -3230 22 0 0 0 chr2 65746675 65746697 -187509886 + AT_rich Low_complexity Low_complexity 1 22 0 26 64 0 0 chr2 65747693 65747740 -187508843 + AT_rich Low_complexity Low_complexity 1 47 0 2085 137 0 3 chr2 65748768 65749067 -187507516 + AluSx SINE Alu 1 298 -14 298 319 110 16 chr2 65749115 65749297 -187507286 - L2 LINE L2 -1 3312 3114 210 219 0 0 chr2 65749379 65749420 -187507163 + GA-rich Low_complexity Low_complexity 6 46 0 227 342 80 36 chr2 65749450 65749703 -187506880 - L2 LINE L2 -239 3033 2765 831 182 30 18 chr2 65749770 65749935 -187506648 + FRAM SINE Alu 1 161 -15 252 0 0 0 chr2 65749935 65749963 -187506620 + (GA)n Simple_repeat Simple_repeat 1 28 0 204 40 0 0 chr2 65749968 65749993 -187506590 + (CAGG)n Simple_repeat Simple_repeat 4 28 0 832 179 226 16 chr2 65750031 65750283 -187506300 + L1ME1 LINE L1 5844 6148 -18 378 0 0 0 chr2 65750285 65750327 -187506256 + (CAT)n Simple_repeat Simple_repeat 2 43 0 203 333 104 45 chr2 65750584 65750893 -187505690 - L2 LINE L2 -564 2750 2424 380 162 0 0 chr2 65750930 65751004 -187505579 + L1MB2 LINE L1 6098 6171 0 204 275 200 50 chr2 65751005 65751085 -187505498 - L2 LINE L2 -19 3253 3162 486 282 97 32 chr2 65751212 65751428 -187505155 - L2 LINE L2 -337 2977 2748 1062 287 120 27 chr2 65751473 65751957 -187504626 + L2 LINE L2 1472 2000 -1314 1503 264 111 16 chr2 65751972 65752541 -187504042 - L1MC4a LINE L1 -1644 6164 5542 448 272 91 97 chr2 65752543 65752852 -187503731 + L2 LINE L2 2190 2496 -818 504 256 33 0 chr2 65752856 65752977 -187503606 + MER3 DNA MER1_type 9 133 -76 583 303 131 8 chr2 65752978 65753222 -187503361 - L2 LINE L2 -356 2958 2685 441 291 27 40 chr2 65753493 65753730 -187502853 + L2 LINE L2 2961 3313 0 181 253 12 12 chr2 65753730 65753813 -187502770 + GA-rich Low_complexity Low_complexity 3 85 0 1604 174 13 39 chr2 65755339 65755644 -187500939 + AluJo SINE Alu 3 299 -13 183 80 0 0 chr2 65755685 65755710 -187500873 + (TA)n Simple_repeat Simple_repeat 2 26 0 1874 166 3 3 chr2 65756693 65756989 -187499594 + AluJb SINE Alu 5 300 -12 25 0 0 0 chr2 65758427 65758452 -187498131 + AT_rich Low_complexity Low_complexity 1 25 0 1654 179 7 17 chr2 65758487 65758778 -187497805 + AluJo SINE Alu 1 288 -24 290 0 75 0 chr2 65758778 65758818 -187497765 + (GGAGAA)n Simple_repeat Simple_repeat 1 43 0 210 147 0 0 chr2 65759170 65759204 -187497379 - L2 LINE L2 -221 3051 3018 335 288 20 41 chr2 65759408 65759554 -187497029 - MIR3 SINE MIR -39 169 27 526 305 139 32 chr2 65759834 65760178 -187496405 - L2 LINE L2 -4 3309 2929 635 316 96 34 chr2 65760179 65760549 -187496034 - L2 LINE L2 -235 3078 2670 2164 113 3 0 chr2 65760549 65760840 -187495743 + AluSx SINE Alu 1 292 -20 635 316 96 34 chr2 65760840 65760966 -187495617 - L2 LINE L2 -643 2670 2553 1339 255 39 33 chr2 65760996 65761482 -187495101 - L1M4 LINE L1 -1034 5112 4624 4322 170 31 28 chr2 65761572 65762410 -187494173 - L1MD1 LINE L1 -2 6240 5397 1549 210 68 11 chr2 65762410 65762762 -187493821 - MLT1A2 LTR MaLR -2 372 1 4322 170 31 28 chr2 65762762 65762876 -187493707 - L1MD1 LINE L1 -845 5397 5285 394 309 0 18 chr2 65762906 65763016 -187493567 + MER20 DNA MER1_type 4 111 -108 2377 234 95 18 chr2 65763021 65763871 -187492712 - L1MD1 LINE L1 -2555 3591 2676 318 203 0 27 chr2 65763903 65763977 -187492606 + L2 LINE L2 3235 3306 -7 487 103 26 0 chr2 65764090 65764168 -187492415 - L1PB4 LINE L1 -13 6143 6064 1746 158 3 14 chr2 65764203 65764488 -187492095 - AluJb SINE Alu -30 282 1 2089 121 13 19 chr2 65764747 65765061 -187491522 - AluSx SINE Alu 0 312 1 25 0 0 0 chr2 65765453 65765478 -187491105 + AT_rich Low_complexity Low_complexity 1 25 0 236 333 204 0 chr2 65765511 65765604 -187490979 + L2 LINE L2 3197 3308 -5 196 276 81 46 chr2 65765653 65765740 -187490843 + MIR SINE MIR 52 141 -67 704 226 0 0 chr2 65766189 65766326 -187490257 + MIR SINE MIR 84 220 -42 2206 127 0 0 chr2 65766461 65766768 -187489815 - AluSx SINE Alu -5 307 1 2058 130 0 0 chr2 65767287 65767564 -187489019 + AluSx SINE Alu 12 288 -24 21 36 0 0 chr2 65767679 65767707 -187488876 + AT_rich Low_complexity Low_complexity 1 28 0 180 318 16 16 chr2 65768254 65768317 -187488266 + MIR3 SINE MIR 121 183 -25 333 165 165 0 chr2 65769706 65769785 -187486798 + L1ME1 LINE L1 6070 6161 -5 235 313 15 8 chr2 65770565 65770699 -187485884 + L1M4 LINE L1 4525 4659 -1487 29 0 0 0 chr2 65770713 65770742 -187485841 + AT_rich Low_complexity Low_complexity 1 29 0 750 183 0 0 chr2 65771046 65771166 -187485417 + FLAM_A SINE Alu 1 120 -13 30 59 0 0 chr2 65771175 65771226 -187485357 + AT_rich Low_complexity Low_complexity 1 51 0 2083 131 0 3 chr2 65771316 65771613 -187484970 + AluSx SINE Alu 1 296 -16 263 213 73 6 chr2 65771701 65771865 -187484718 + (TA)n Simple_repeat Simple_repeat 1 175 0 223 204 27 70 chr2 65771798 65771984 -187484599 + (CATATA)n Simple_repeat Simple_repeat 3 180 0 * 1445 164 17 0 chr2 65771984 65772215 -187484368 - MER7A DNA MER2_type -3 333 99 563 141 0 0 chr2 65772224 65772302 -187484281 + AluJb SINE Alu 208 285 -27 249 33 0 0 chr2 65772302 65772332 -187484251 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 517 206 33 0 chr2 65772332 65772424 -187484159 - MER7A DNA MER2_type -252 94 2 239 264 14 83 chr2 65772511 65772583 -187484000 - MIR SINE MIR -188 74 8 409 235 61 0 chr2 65772748 65772846 -187483737 - LTR40c LTR ERVL -361 104 1 2124 131 0 0 chr2 65772905 65773203 -187483380 - AluSx SINE Alu -14 298 1 380 153 0 0 chr2 65773768 65773827 -187482756 - Charlie1 DNA MER1_type -1 2760 2702 10702 173 84 28 chr2 65773830 65775669 -187480914 + L1MB2 LINE L1 19 1754 -4628 1934 150 0 20 chr2 65775669 65775975 -187480608 - AluSx SINE Alu -12 300 1 10702 173 84 28 chr2 65775975 65776170 -187480413 + L1MB2 LINE L1 1754 1937 -4445 2098 133 3 0 chr2 65776170 65776470 -187480113 + AluJb SINE Alu 1 301 -11 10702 173 84 28 chr2 65776470 65776676 -187479907 + L1MB2 LINE L1 1937 2130 -4252 1764 200 86 15 chr2 65776676 65776902 -187479681 - Tigger2a DNA MER2_type -2274 434 226 2180 107 0 0 chr2 65776902 65777193 -187479390 + AluSg SINE Alu 2 292 -18 1764 200 86 15 chr2 65777193 65777371 -187479212 - Tigger2a DNA MER2_type -2482 226 1 10702 173 84 28 chr2 65777371 65777566 -187479017 + L1MB2 LINE L1 2130 2595 -3787 5706 244 46 24 chr2 65777596 65779184 -187477399 + L1MA5A LINE L1 4 1363 -5426 10087 158 50 37 chr2 65779222 65780453 -187476130 + L1MA5A LINE L1 3607 4821 -2118 239 175 0 0 chr2 65780453 65780493 -187476090 + LTR23 LTR ERV1 320 359 -78 10087 158 50 37 chr2 65780493 65782513 -187474070 + L1MA5A LINE L1 4821 6939 0 1813 243 57 12 chr2 65782499 65783149 -187473434 + L1MB2 LINE L1 2599 3277 -3105 * 8576 210 28 26 chr2 65783630 65784971 -187471612 + L1MB2 LINE L1 3272 4623 -1796 1756 186 3 6 chr2 65784971 65785282 -187471301 + AluJb SINE Alu 1 310 -2 8576 210 28 26 chr2 65785282 65786548 -187470035 + L1MB2 LINE L1 4623 5884 -535 1313 192 39 0 chr2 65786560 65786789 -187469794 + Tigger7 DNA MER2_type 9 246 -2241 392 193 0 140 chr2 65786822 65786906 -187469677 + Tigger7 DNA MER2_type 2489 2555 -32 1849 174 0 0 chr2 65786906 65787200 -187469383 + AluSg SINE Alu 4 297 -13 392 193 0 140 chr2 65787200 65787229 -187469354 + Tigger7 DNA MER2_type 2555 2586 -1 2597 140 81 16 chr2 65787232 65787678 -187468905 + L1MB2 LINE L1 5883 6365 -42 2171 117 7 0 chr2 65787678 65787977 -187468606 + AluSx SINE Alu 1 301 -11 2597 140 81 16 chr2 65787977 65788023 -187468560 + L1MB2 LINE L1 6365 6407 0 2544 156 119 14 chr2 65788027 65788656 -187467927 - Charlie1 DNA MER1_type -43 2718 2024 1241 250 127 66 chr2 65788806 65789473 -187467110 - L1ME3A LINE L1 -208 5962 5255 848 261 92 21 chr2 65789999 65790054 -187466529 - L1ME3A LINE L1 -1587 4559 4509 2268 84 0 7 chr2 65790054 65790351 -187466232 + AluSc SINE Alu 1 295 -14 198 0 0 0 chr2 65790351 65790373 -187466210 + (TA)n Simple_repeat Simple_repeat 2 23 0 848 261 92 21 chr2 65790373 65790749 -187465834 - L1ME3A LINE L1 -1636 4510 4096 956 265 99 13 chr2 65790852 65791505 -187465078 - L1ME3A LINE L1 -2199 3947 3106 22 0 0 0 chr2 65791684 65791706 -187464877 + AT_rich Low_complexity Low_complexity 1 22 0 452 256 241 5 chr2 65792253 65792448 -187464135 + MIR SINE MIR 9 249 -13 321 360 171 27 chr2 65793065 65793323 -187463260 - L2 LINE L2 -837 2477 2183 183 156 0 0 chr2 65793815 65793847 -187462736 + GA-rich Low_complexity Low_complexity 2 33 0 288 214 14 43 chr2 65793944 65794014 -187462569 - MIR SINE MIR 0 262 195 691 243 8 160 chr2 65794017 65794276 -187462307 - L2 LINE L2 -5 3308 3162 2090 122 3 3 chr2 65794276 65794579 -187462004 - AluSg SINE Alu -7 303 1 691 243 8 160 chr2 65794579 65794826 -187461757 - L2 LINE L2 -151 3162 2879 479 207 0 0 chr2 65795431 65795518 -187461065 - MIR SINE MIR -82 180 94 24 67 0 0 chr2 65796918 65796963 -187459620 + AT_rich Low_complexity Low_complexity 1 45 0 2480 72 3 0 chr2 65798101 65798407 -187458176 + AluSp SINE Alu 1 307 -6 198 71 0 0 chr2 65798624 65798652 -187457931 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 1779 136 108 9 chr2 65799308 65799624 -187456959 + MER7A DNA MER2_type 1 345 -1 1669 156 138 43 chr2 65799923 65800386 -187456197 + Charlie4a DNA MER1_type 1 507 -1 23 0 0 0 chr2 65800407 65800430 -187456153 + AT_rich Low_complexity Low_complexity 1 23 0 1278 175 0 0 chr2 65800559 65800782 -187455801 + AluJo SINE Alu 86 308 -4 628 225 8 0 chr2 65804302 65804422 -187452161 + FLAM_A SINE Alu 8 128 -14 2456 223 71 40 chr2 65804828 65805196 -187451387 - HsTC2a DNA Tc2 -1156 744 389 2073 218 63 8 chr2 65805196 65805688 -187450895 + Charlie1b DNA MER1_type 5 523 0 2292 94 3 0 chr2 65805693 65805991 -187450592 - AluSp SINE Alu -14 299 1 2456 223 71 40 chr2 65805991 65806335 -187450248 - HsTC2a DNA Tc2 -1514 386 4 2192 107 0 26 chr2 65806521 65806831 -187449752 - AluSx SINE Alu -10 302 1 488 301 90 12 chr2 65806918 65807084 -187449499 + MIR3 SINE MIR 30 208 0 653 207 41 12 chr2 65807340 65807509 -187449074 + MER104 DNA MER2_type 3 176 -4 313 328 176 15 chr2 65807562 65807766 -187448817 - MIR SINE MIR -18 244 8 897 238 31 45 chr2 65807815 65807943 -187448640 + L1ME4a LINE L1 5543 5671 -450 2408 69 7 0 chr2 65807943 65808248 -187448335 + AluSp SINE Alu 1 307 -6 897 238 31 45 chr2 65808248 65808409 -187448174 + L1ME4a LINE L1 5671 5828 -293 1009 148 18 6 chr2 65808411 65808580 -187448003 + AluJb SINE Alu 137 307 -5 314 188 72 0 chr2 65808586 65808655 -187447928 + L1ME4a LINE L1 5815 5888 -233 264 261 99 27 chr2 65808664 65808775 -187447808 + L1ME4a LINE L1 6000 6118 -3 266 208 181 0 chr2 65808908 65808980 -187447603 - MIR3 SINE MIR -5 203 119 642 230 145 15 chr2 65808990 65809190 -187447393 - MIR SINE MIR -3 259 34 203 286 36 48 chr2 65809219 65809303 -187447280 - MIR SINE MIR -102 106 24 592 118 21 0 chr2 65809456 65809549 -187447034 + L1MB7 LINE L1 6036 6130 -54 25 0 0 0 chr2 65810277 65810302 -187446281 + AT_rich Low_complexity Low_complexity 1 25 0 419 258 40 16 chr2 65811087 65811211 -187445372 - MIR SINE MIR -134 128 2 741 170 16 110 chr2 65811537 65811574 -187445009 - MLT1G LTR MaLR -2 588 549 768 132 29 52 chr2 65811574 65811710 -187444873 + FLAM_C SINE Alu 1 133 0 741 170 16 110 chr2 65811710 65811854 -187444729 - MLT1G LTR MaLR -41 549 424 727 181 11 110 chr2 65811832 65812014 -187444569 - MLT1G LTR MaLR -253 277 114 * 1295 225 72 58 chr2 65812041 65812596 -187443987 + L1M4 LINE L1 3679 4241 -1905 2189 67 0 4 chr2 65812648 65812918 -187443665 - AluY SINE Alu -8 303 35 2740 244 64 13 chr2 65812937 65813703 -187442880 + L1ME2 LINE L1 5354 6158 -6 495 195 63 6 chr2 65813734 65813893 -187442690 + L1M4 LINE L1 4383 4550 -1596 4806 158 35 24 chr2 65813896 65814789 -187441794 - L1MB1 LINE L1 -1 6167 5265 376 326 135 45 chr2 65815161 65815642 -187440941 + L2 LINE L2 2733 3272 0 209 246 77 120 chr2 65815644 65815827 -187440756 + L3b LINE CR1 1277 1451 -132 1793 121 38 0 chr2 65816782 65817047 -187439536 + AluSx SINE Alu 21 295 -17 1917 146 20 3 chr2 65817051 65817353 -187439230 + AluSx SINE Alu 3 309 -3 186 43 0 0 chr2 65824765 65824788 -187431795 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr2 65825010 65825032 -187431551 + AT_rich Low_complexity Low_complexity 1 22 0 402 259 128 27 chr2 65826598 65826785 -187429798 + MIR SINE MIR 45 249 -13 314 228 11 43 chr2 65828447 65828539 -187428044 + MIR SINE MIR 5 93 -169 1731 160 3 42 chr2 65828726 65829039 -187427544 + AluJb SINE Alu 3 303 -9 436 191 118 73 chr2 65829234 65829344 -187427239 - FLAM_A SINE Alu -21 121 7 367 257 121 0 chr2 65829374 65829514 -187427069 - L1ME4a LINE L1 -9 6112 5956 330 294 75 0 chr2 65829552 65829712 -187426871 - L1MC5 LINE L1 -519 7442 7271 1496 246 85 76 chr2 65829879 65830469 -187426114 - MLT1G LTR MaLR 0 590 1 351 242 94 27 chr2 65830476 65830625 -187425958 - L1MC4 LINE L1 -780 7262 7104 1168 167 88 56 chr2 65830626 65830877 -187425706 + AluJb SINE Alu 1 259 -53 441 0 0 0 chr2 65830894 65830943 -187425640 + (CA)n Simple_repeat Simple_repeat 2 50 0 337 366 96 24 chr2 65831684 65832184 -187424399 + L2 LINE L2 2204 2739 -575 231 330 148 9 chr2 65832877 65832992 -187423591 - L2 LINE L2 -213 3059 2929 2364 80 0 7 chr2 65833208 65833507 -187423076 - AluSc SINE Alu -12 297 1 30 27 0 0 chr2 65834889 65834926 -187421657 + AT_rich Low_complexity Low_complexity 1 37 0 1972 136 48 27 chr2 65835131 65835461 -187421122 - MER1B DNA MER1_type 0 337 1 771 180 0 0 chr2 65835704 65835832 -187420751 + AluJ SINE Alu 2 129 -183 24 0 0 0 chr2 65835832 65835856 -187420727 + AT_rich Low_complexity Low_complexity 1 24 0 1089 172 6 0 chr2 65835926 65836100 -187420483 + AluJ SINE Alu 132 306 -6 495 261 104 43 chr2 65837232 65837443 -187419140 - MER58A DNA MER1_type 0 224 1 25 75 0 0 chr2 65838429 65838482 -187418101 + AT_rich Low_complexity Low_complexity 1 53 0 2239 92 0 3 chr2 65838555 65838848 -187417735 - AluSx SINE Alu -20 292 1 232 301 0 75 chr2 65840921 65841014 -187415569 + L2 LINE L2 3186 3271 -1 2186 106 13 0 chr2 65841438 65841741 -187414842 - AluSg SINE Alu -1 309 3 21 0 0 0 chr2 65842888 65842909 -187413674 + AT_rich Low_complexity Low_complexity 1 21 0 1665 160 46 0 chr2 65845987 65846268 -187410315 + AluJo SINE Alu 6 299 -13 22 35 0 0 chr2 65846268 65846297 -187410286 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 65847598 65847620 -187408963 + AT_rich Low_complexity Low_complexity 1 22 0 380 53 0 53 chr2 65848717 65848793 -187407790 + (TA)n Simple_repeat Simple_repeat 1 72 0 26 0 0 0 chr2 65850855 65850881 -187405702 + AT_rich Low_complexity Low_complexity 1 26 0 441 0 0 0 chr2 65852435 65852484 -187404099 + (TG)n Simple_repeat Simple_repeat 2 50 0 21 0 0 0 chr2 65852702 65852723 -187403860 + AT_rich Low_complexity Low_complexity 1 21 0 192 267 0 0 chr2 65852780 65852825 -187403758 - MIR3 SINE MIR -9 199 155 259 239 111 60 chr2 65853061 65853180 -187403403 - MIR SINE MIR -57 151 34 346 311 7 61 chr2 65854097 65854245 -187402338 - MIR3 SINE MIR -61 147 6 2703 183 44 2 chr2 65854337 65854879 -187401704 - L1MB5 LINE L1 -15 6159 5595 2148 117 0 10 chr2 65855420 65855728 -187400855 + AluSq SINE Alu 1 305 -8 631 236 38 91 chr2 65856546 65856809 -187399774 - MIR SINE MIR 0 262 14 21 0 0 0 chr2 65859507 65859528 -187397055 + AT_rich Low_complexity Low_complexity 1 21 0 537 273 57 40 chr2 65859825 65860001 -187396582 - MER5A DNA MER1_type -5 184 6 21 57 0 0 chr2 65861810 65861845 -187394738 + AT_rich Low_complexity Low_complexity 1 35 0 26 64 0 0 chr2 65863677 65863724 -187392859 + AT_rich Low_complexity Low_complexity 1 47 0 1549 81 57 105 chr2 65864745 65865041 -187391542 - MER44D DNA MER2_type 0 609 58 250 227 15 61 chr2 65865210 65865276 -187391307 - MIR3 SINE MIR -38 170 108 198 0 0 0 chr2 65866149 65866171 -187390412 + (A)n Simple_repeat Simple_repeat 1 22 0 254 235 0 0 chr2 65867971 65868022 -187388561 + GA-rich Low_complexity Low_complexity 3 53 0 2340 76 7 0 chr2 65869704 65869995 -187386588 + AluSp SINE Alu 1 293 -20 585 216 0 0 chr2 65870511 65870652 -187385931 - FLAM_A SINE Alu 0 141 1 2106 110 0 35 chr2 65871420 65871737 -187384846 - AluSq SINE Alu -7 306 1 857 110 0 0 chr2 65872212 65872330 -187384253 - AluSq/x SINE Alu -195 118 1 23 54 0 0 chr2 65872604 65872641 -187383942 + AT_rich Low_complexity Low_complexity 1 37 0 1712 163 27 13 chr2 65872888 65873188 -187383395 + AluJo SINE Alu 1 304 -8 341 286 137 24 chr2 65874093 65874261 -187382322 - MER5A DNA MER1_type 0 189 3 334 270 174 9 chr2 65874309 65874424 -187382159 + MIR SINE MIR 3 136 -126 2181 102 7 3 chr2 65874439 65874734 -187381849 + AluSg SINE Alu 6 301 -9 411 137 0 42 chr2 65874734 65874829 -187381754 + (GGGAA)n Simple_repeat Simple_repeat 1 91 0 591 15 0 0 chr2 65874833 65874901 -187381682 + (GGAA)n Simple_repeat Simple_repeat 1 68 0 2108 132 0 22 chr2 65874913 65875050 -187381533 + AluSx SINE Alu 1 139 -173 2166 117 3 3 chr2 65875050 65875358 -187381225 + AluSg SINE Alu 1 308 -2 2108 132 0 22 chr2 65875358 65875539 -187381044 + AluSx SINE Alu 139 312 0 2363 97 3 0 chr2 65875674 65875984 -187380599 - AluSx SINE Alu -1 311 1 829 153 15 0 chr2 65875995 65876126 -187380457 - FLAM_A SINE Alu 0 133 1 2163 102 0 3 chr2 65876778 65877071 -187379512 - AluSg SINE Alu -17 293 2 220 19 19 75 chr2 65877270 65877323 -187379260 + (TCC)n Simple_repeat Simple_repeat 2 51 0 2199 111 7 0 chr2 65877323 65877621 -187378962 - AluSx SINE Alu -12 300 1 1895 151 0 3 chr2 65877898 65878190 -187378393 + AluSx SINE Alu 1 291 -21 1634 167 7 43 chr2 65879018 65879070 -187377513 + AluJo SINE Alu 11 63 -249 2242 104 7 0 chr2 65879070 65879378 -187377205 + AluSq SINE Alu 1 310 -3 1634 167 7 43 chr2 65879378 65879630 -187376953 + AluJo SINE Alu 63 304 -8 1665 171 53 0 chr2 65879735 65880016 -187376567 + AluJo SINE Alu 1 296 -16 1362 192 21 21 chr2 65880283 65880564 -187376019 - AluJo SINE Alu -27 285 5 498 17 0 0 chr2 65881301 65881360 -187375223 + (TG)n Simple_repeat Simple_repeat 2 60 0 827 251 55 17 chr2 65881414 65881651 -187374932 - MIR SINE MIR -10 252 6 376 326 0 0 chr2 65882083 65882181 -187374402 + MIR SINE MIR 14 111 -151 1966 139 45 40 chr2 65882684 65882926 -187373657 + L1MA8 LINE L1 5860 6107 -184 778 150 0 0 chr2 65882926 65883069 -187373514 - FLAM_C SINE Alu 0 143 1 1966 139 45 40 chr2 65883069 65883248 -187373335 + L1MA8 LINE L1 6107 6284 -7 651 189 16 0 chr2 65883446 65883573 -187373010 - FLAM_A SINE Alu -4 129 1 31 0 0 0 chr2 65883719 65883750 -187372833 + AT_rich Low_complexity Low_complexity 1 31 0 237 310 69 0 chr2 65884431 65884518 -187372065 + L2 LINE L2 3134 3226 -46 459 279 70 0 chr2 65884571 65884700 -187371883 - MIR SINE MIR -39 223 86 2199 102 10 7 chr2 65884744 65885037 -187371546 - AluSx SINE Alu -18 294 1 189 0 0 0 chr2 65885415 65885436 -187371147 + (CA)n Simple_repeat Simple_repeat 2 22 0 2225 102 0 13 chr2 65885494 65885797 -187370786 - AluY SINE Alu -12 299 1 2423 85 0 3 chr2 65885797 65886103 -187370480 - AluSx SINE Alu -6 306 1 1982 153 0 0 chr2 65886653 65886961 -187369622 + AluSx SINE Alu 1 308 -4 1025 51 0 15 chr2 65887116 65887253 -187369330 + L1PA5 LINE L1 6017 6151 -3 23 33 0 0 chr2 65887253 65887283 -187369300 + AT_rich Low_complexity Low_complexity 1 30 0 2383 75 3 0 chr2 65887293 65887599 -187368984 + AluY SINE Alu 1 307 -4 22 99 0 0 chr2 65891135 65891206 -187365377 + AT_rich Low_complexity Low_complexity 1 71 0 26 30 0 0 chr2 65891509 65891542 -187365041 + AT_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr2 65892762 65892784 -187363799 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr2 65894723 65894753 -187361830 + AT_rich Low_complexity Low_complexity 1 30 0 223 104 60 15 chr2 65895140 65895207 -187361376 + (TA)n Simple_repeat Simple_repeat 1 70 0 22 70 0 0 chr2 65897231 65897274 -187359309 + AT_rich Low_complexity Low_complexity 1 43 0 191 204 19 0 chr2 65897304 65897358 -187359225 + (TA)n Simple_repeat Simple_repeat 1 55 0 27 49 0 0 chr2 65897867 65897908 -187358675 + AT_rich Low_complexity Low_complexity 1 41 0 231 276 17 0 chr2 65898118 65898176 -187358407 + L3 LINE CR1 1519 1577 0 26 0 0 0 chr2 65898301 65898327 -187358256 + AT_rich Low_complexity Low_complexity 1 26 0 465 19 0 0 chr2 65898924 65898978 -187357605 + (T)n Simple_repeat Simple_repeat 1 54 0 229 214 18 18 chr2 65903235 65903291 -187353292 + CT-rich Low_complexity Low_complexity 3 58 0 347 272 0 11 chr2 65903949 65904041 -187352542 + CT-rich Low_complexity Low_complexity 2 92 0 219 107 71 0 chr2 65905640 65905696 -187350887 + (CGGGG)n Simple_repeat Simple_repeat 1 60 0 288 77 0 0 chr2 65908714 65908753 -187347830 + (TG)n Simple_repeat Simple_repeat 1 39 0 276 30 0 0 chr2 65911130 65911163 -187345420 + (CCA)n Simple_repeat Simple_repeat 1 33 0 275 120 0 20 chr2 65912126 65912176 -187344407 + (TA)n Simple_repeat Simple_repeat 2 50 0 216 70 53 70 chr2 65912459 65912516 -187344067 + A-rich Low_complexity Low_complexity 5 60 0 189 197 26 92 chr2 65914420 65914496 -187342087 + MIR SINE MIR 60 130 -132 23 33 0 0 chr2 65914866 65914896 -187341687 + GC_rich Low_complexity Low_complexity 1 30 0 261 57 0 0 chr2 65914977 65915012 -187341571 + (CCCCCA)n Simple_repeat Simple_repeat 2 36 0 27 29 0 0 chr2 65917263 65917297 -187339286 + AT_rich Low_complexity Low_complexity 1 34 0 225 277 10 69 chr2 65917681 65917782 -187338801 + L2 LINE L2 2183 2277 -1037 606 200 69 6 chr2 65917840 65918000 -187338583 + L1MC5 LINE L1 7745 7914 -47 251 212 222 20 chr2 65918844 65918943 -187337640 - MARNA DNA Mariner -203 383 265 256 271 29 0 chr2 65919386 65919456 -187337127 + L2 LINE L2 3200 3271 -1 22 70 0 0 chr2 65919650 65919693 -187336890 + AT_rich Low_complexity Low_complexity 1 43 0 1829 165 0 108 chr2 65919874 65920281 -187336302 - MER47A DNA MER2_type -2 364 2 1699 254 57 31 chr2 65920282 65921078 -187335505 - L1ME3A LINE L1 -122 5999 5191 250 212 35 53 chr2 65921084 65921197 -187335386 - L1ME3A LINE L1 -1005 5141 5031 370 342 161 31 chr2 65921278 65922217 -187334366 + L2 LINE L2 2178 3240 -32 780 241 59 5 chr2 65923253 65923456 -187333127 + HAL1 LINE L1 2 215 -2292 1410 164 27 17 chr2 65923761 65924082 -187332501 + MER33 DNA MER1_type 1 310 -14 328 299 76 71 chr2 65924521 65924547 -187332036 + L2 LINE L2 1262 1286 -2028 1724 202 0 0 chr2 65924547 65924844 -187331739 - AluJb SINE Alu -15 297 1 328 299 76 71 chr2 65924844 65925014 -187331569 + L2 LINE L2 1286 1459 -1855 3173 112 33 29 chr2 65925031 65925555 -187331028 - MLT2A1 LTR ERVL 0 515 1 734 355 123 6 chr2 65925604 65926263 -187330320 + L2 LINE L2 1527 2262 -1052 723 263 66 65 chr2 65926591 65927134 -187329449 + MLT1H1 LTR MaLR 1 547 -8 1925 171 0 0 chr2 65927299 65927603 -187328980 - AluJo SINE Alu -8 304 1 329 245 0 20 chr2 65927785 65927887 -187328696 + MIR SINE MIR 85 184 -78 2382 110 135 33 chr2 65927891 65928009 -187328574 + L1PA16 LINE L1 5693 5798 -368 2449 68 0 0 chr2 65928009 65928301 -187328282 + AluY SINE Alu 1 292 -19 2382 110 135 33 chr2 65928301 65928606 -187327977 + L1PA16 LINE L1 5798 6157 -9 1800 153 7 17 chr2 65928663 65928951 -187327632 + AluJo SINE Alu 3 287 -25 1673 199 6 16 chr2 65929048 65929360 -187327223 + AluJo SINE Alu 3 311 -1 4935 184 36 47 chr2 65929446 65929496 -187327087 - L1MB3 LINE L1 -1 6182 6133 2160 128 0 0 chr2 65929496 65929792 -187326791 - AluSx SINE Alu -16 296 1 4935 184 36 47 chr2 65929792 65931523 -187325060 - L1MB3 LINE L1 -50 6133 4383 3696 146 32 34 chr2 65931523 65931860 -187324723 - L1MB2 LINE L1 -3 6168 5832 2509 78 0 13 chr2 65931860 65932169 -187324414 - AluY SINE Alu -6 305 1 3696 146 32 34 chr2 65932169 65932214 -187324369 - L1MB2 LINE L1 -339 5832 5788 217 0 0 57 chr2 65932214 65932249 -187324334 + (TA)n Simple_repeat Simple_repeat 1 33 0 3696 146 32 34 chr2 65932249 65932346 -187324237 - L1MB2 LINE L1 -383 5788 5692 1910 154 73 16 chr2 65932346 65932715 -187323868 - MLT1B LTR MaLR 0 390 1 3696 146 32 34 chr2 65932715 65932950 -187323633 - L1MB2 LINE L1 -479 5692 5453 4935 184 36 47 chr2 65932950 65933108 -187323475 - L1MB3 LINE L1 -1800 4383 4225 900 153 0 0 chr2 65933108 65933239 -187323344 - FLAM_C SINE Alu 0 133 3 4935 184 36 47 chr2 65933239 65933279 -187323304 - L1MB3 LINE L1 -1958 4225 4186 2142 164 5 16 chr2 65933279 65933658 -187322925 + THE1C LTR MaLR 1 375 0 4935 184 36 47 chr2 65933658 65933851 -187322732 - L1MB3 LINE L1 -1997 4186 4034 531 192 117 0 chr2 65934238 65934358 -187322225 + MER94 DNA DNA 1 134 0 37 0 0 0 chr2 65935398 65935435 -187321148 + AT_rich Low_complexity Low_complexity 1 37 0 1879 231 135 30 chr2 65936044 65936705 -187319878 - MER20B DNA MER1_type 0 783 54 2435 71 0 0 chr2 65936713 65937009 -187319574 - AluY SINE Alu -15 296 1 1855 139 52 0 chr2 65937030 65937324 -187319259 - AluJb SINE Alu 0 308 1 33 0 0 0 chr2 65937331 65937364 -187319219 + AT_rich Low_complexity Low_complexity 1 33 0 962 106 0 0 chr2 65937364 65937487 -187319096 - AluJb SINE Alu -189 123 1 5369 155 29 15 chr2 65938452 65939103 -187317480 - L1PA16 LINE L1 -20 6146 5506 2265 122 0 0 chr2 65939103 65939406 -187317177 - AluSg SINE Alu -7 303 1 5369 155 29 15 chr2 65939406 65940545 -187316038 - L1PA16 LINE L1 -660 5506 4340 2935 229 17 12 chr2 65940543 65941316 -187315267 - L1MB3 LINE L1 -2521 3625 2849 * 22960 33 1 0 chr2 65942679 65947360 -187309223 - L1PA3 LINE L1 0 6155 1471 388 309 94 13 chr2 65948610 65948759 -187307824 + MER91A DNA MER1_type 36 196 0 26 30 0 0 chr2 65948968 65949001 -187307582 + AT_rich Low_complexity Low_complexity 1 33 0 665 309 140 18 chr2 65949076 65949526 -187307057 + L2 LINE L2 2805 3309 -4 25 0 0 0 chr2 65949688 65949713 -187306870 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr2 65949897 65949919 -187306664 + AT_rich Low_complexity Low_complexity 1 22 0 363 338 143 4 chr2 65950115 65950352 -187306231 - L2 LINE L2 -1856 1458 1189 2290 227 82 33 chr2 65950364 65951211 -187305372 + L1MDa LINE L1 2090 2894 -3646 2336 116 0 0 chr2 65951211 65951521 -187305062 + AluSx SINE Alu 1 310 -2 2290 227 82 33 chr2 65951521 65951637 -187304946 + L1MDa LINE L1 2894 3003 -3537 1578 206 30 0 chr2 65951637 65951967 -187304616 - MER58B DNA MER1_type -1 340 1 2290 227 82 33 chr2 65951967 65952250 -187304333 + L1MDa LINE L1 3003 3411 -3129 2130 126 0 13 chr2 65952269 65952578 -187304005 - AluSx SINE Alu -7 305 1 4233 76 5 0 chr2 65952614 65953165 -187303418 + MER41A LTR ERV1 1 554 0 2308 77 0 42 chr2 65953183 65953493 -187303090 + AluSg SINE Alu 1 297 -13 2434 78 10 0 chr2 65953612 65953920 -187302663 - AluY SINE Alu 0 311 1 2123 117 0 0 chr2 65954557 65954879 -187301704 + AluSx SINE Alu 3 324 0 28 0 0 0 chr2 65954995 65955023 -187301560 + AT_rich Low_complexity Low_complexity 1 28 0 13227 206 48 25 chr2 65955035 65957885 -187298698 - L1MA4A LINE L1 -21 6984 4202 1957 161 7 0 chr2 65957885 65958195 -187298388 - AluSx SINE Alu 0 312 1 13227 206 48 25 chr2 65958195 65962091 -187294492 - L1MA4A LINE L1 -2803 4202 10 342 263 93 0 chr2 65962551 65962669 -187293914 + L1ME LINE L1 5549 5677 -444 24 0 0 0 chr2 65962864 65962888 -187293695 + AT_rich Low_complexity Low_complexity 1 24 0 523 122 154 0 chr2 65962975 65963098 -187293485 + L1MA4 LINE L1 5970 6111 -189 845 127 97 0 chr2 65963493 65963658 -187292925 + L1MA4 LINE L1 6116 6296 -4 32 43 0 0 chr2 65963851 65963897 -187292686 + AT_rich Low_complexity Low_complexity 1 46 0 2629 100 5 5 chr2 65964652 65965041 -187291542 + L1MA1 LINE L1 5910 6298 -4 22 35 0 0 chr2 65965979 65966008 -187290575 + AT_rich Low_complexity Low_complexity 1 29 0 1920 161 3 0 chr2 65966025 65966311 -187290272 + AluJb SINE Alu 5 291 -21 1039 72 0 0 chr2 65966513 65966638 -187289945 - AluSg/x SINE Alu -18 294 170 2290 90 0 3 chr2 65966671 65966960 -187289623 - AluSg SINE Alu -21 289 2 6191 168 40 24 chr2 65966970 65967961 -187288622 - L1MC1 LINE L1 -17 6316 5342 1886 57 0 0 chr2 65967961 65968188 -187288395 - AluY SINE Alu -3 308 82 6191 168 40 24 chr2 65968188 65968550 -187288033 - L1MC1 LINE L1 -991 5342 4987 2220 91 7 16 chr2 65968550 65968857 -187287726 - AluSq SINE Alu -9 304 1 6191 168 40 24 chr2 65968857 65968914 -187287669 - L1MC1 LINE L1 -1346 4987 4932 207 0 0 0 chr2 65968914 65968937 -187287646 + (TA)n Simple_repeat Simple_repeat 1 23 0 6191 168 40 24 chr2 65968937 65969568 -187287015 - L1MC1 LINE L1 -1401 4932 4233 4348 179 33 22 chr2 65969777 65970142 -187286441 - L1MB2 LINE L1 -7 6164 5805 279 0 0 0 chr2 65970142 65970173 -187286410 + (TG)n Simple_repeat Simple_repeat 2 32 0 4348 179 33 22 chr2 65970173 65971171 -187285412 - L1MB2 LINE L1 -366 5805 4787 191 61 30 0 chr2 65971174 65971207 -187285376 + (TA)n Simple_repeat Simple_repeat 1 34 0 2094 135 3 3 chr2 65971227 65971538 -187285045 - AluSx SINE Alu -1 311 1 2391 202 57 6 chr2 65971592 65972083 -187284500 - MER34 LTR ERV1 0 542 27 2185 108 0 23 chr2 65972667 65972973 -187283610 - AluSg SINE Alu -9 301 3 2222 97 0 26 chr2 65975531 65975840 -187280743 - AluY SINE Alu -10 301 1 1313 212 78 24 chr2 65975888 65976284 -187280299 - LTR40b LTR ERVL 0 462 1 1800 154 58 3 chr2 65976379 65976672 -187279911 - AluJo SINE Alu 0 312 4 23 0 0 0 chr2 65977855 65977878 -187278705 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 65978668 65978690 -187277893 + AT_rich Low_complexity Low_complexity 1 22 0 628 231 128 68 chr2 65978715 65979216 -187277367 - L1ME4a LINE L1 -18 6103 5573 505 286 61 14 chr2 65979704 65979851 -187276732 - MIR3 SINE MIR -1 207 54 570 252 0 0 chr2 65980479 65980598 -187275985 - FLAM_A SINE Alu -14 119 1 2118 110 0 16 chr2 65980609 65980917 -187275666 - AluSx SINE Alu -9 303 1 2060 142 3 0 chr2 65980943 65981238 -187275345 - AluJb SINE Alu -14 298 3 212 155 53 5 chr2 65981423 65981470 -187275113 - MIR SINE MIR -57 151 104 1692 170 12 46 chr2 65981666 65981989 -187274594 - AluJo SINE Alu 0 312 1 2377 86 0 10 chr2 65982128 65982429 -187274154 - AluSc SINE Alu -11 298 1 348 188 0 0 chr2 65982656 65982725 -187273858 + (TA)n Simple_repeat Simple_repeat 2 70 0 2121 114 3 0 chr2 65982864 65983153 -187273430 + AluSx SINE Alu 1 290 -22 3883 180 42 28 chr2 65983474 65983689 -187272894 - L1MB3 LINE L1 -2 6679 6469 2171 106 3 0 chr2 65983689 65983972 -187272611 - AluSp SINE Alu -27 286 3 3883 180 42 28 chr2 65983972 65984478 -187272105 - L1MB3 LINE L1 -212 6469 5972 236 125 0 0 chr2 65984478 65984510 -187272073 + U2 snRNA snRNA 1 32 -156 3883 180 42 28 chr2 65984510 65984712 -187271871 - L1MB3 LINE L1 -709 5972 5774 1856 168 36 3 chr2 65984712 65985045 -187271538 + MER2 DNA MER2_type 1 344 0 3883 180 42 28 chr2 65985045 65985684 -187270899 - L1MB3 LINE L1 -907 5774 5087 3437 253 68 39 chr2 65985681 65986837 -187269746 - L1MB3 LINE L1 -3478 3166 2045 * 2248 108 3 3 chr2 65986837 65987142 -187269441 - AluSx SINE Alu -7 305 1 3437 253 68 39 chr2 65987142 65988188 -187268395 - L1MB3 LINE L1 -4599 2045 806 1860 125 96 34 chr2 65988450 65988803 -187267780 + THE1C LTR MaLR 1 375 0 248 303 95 19 chr2 65988845 65989056 -187267527 - L1MB3 LINE L1 -6308 234 8 230 283 0 0 chr2 65989464 65989517 -187267066 + (CA)n Simple_repeat Simple_repeat 2 54 0 1966 148 0 0 chr2 65989851 65990148 -187266435 + AluJb SINE Alu 5 301 -11 2061 130 7 0 chr2 65990343 65990636 -187265947 - AluSx SINE Alu -17 295 1 1773 145 24 27 chr2 65990736 65991033 -187265550 - AluJo SINE Alu -10 302 7 201 133 0 0 chr2 65991396 65991426 -187265157 + (GA)n Simple_repeat Simple_repeat 1 30 0 21 57 0 0 chr2 65991445 65991480 -187265103 + AT_rich Low_complexity Low_complexity 1 35 0 5427 109 30 23 chr2 65991547 65992225 -187264358 - L1PA13 LINE L1 0 6163 5492 225 0 0 0 chr2 65992225 65992250 -187264333 + (TTG)n Simple_repeat Simple_repeat 2 26 0 5427 109 30 23 chr2 65992250 65993081 -187263502 - L1PA13 LINE L1 -671 5492 4644 747 289 65 14 chr2 65993101 65993392 -187263191 - L1ME LINE L1 -341 5780 5475 1996 138 16 40 chr2 65993411 65993458 -187263125 - L1PB1 LINE L1 -8 6143 6096 2345 70 7 3 chr2 65993458 65993757 -187262826 - AluY SINE Alu -10 301 2 1996 138 16 40 chr2 65993757 65994079 -187262504 - L1PB1 LINE L1 -55 6096 5783 270 303 0 0 chr2 65994084 65994173 -187262410 - L1MC4 LINE L1 -1340 6702 6614 * 329 219 49 0 chr2 65994095 65994177 -187262406 + L1MC4 LINE L1 6614 6699 -1343 270 0 0 0 chr2 65994177 65994207 -187262376 + (CA)n Simple_repeat Simple_repeat 2 31 0 10115 163 47 76 chr2 65994207 65996084 -187260499 - L1P5 LINE L1 -373 6494 4565 2336 94 3 0 chr2 65996084 65996383 -187260200 - AluSg SINE Alu -10 300 1 10115 163 47 76 chr2 65996383 65997824 -187258759 - L1P5 LINE L1 -2302 4565 3085 288 0 0 0 chr2 65997824 65997856 -187258727 + (TG)n Simple_repeat Simple_repeat 2 33 0 10115 163 47 76 chr2 65997856 65997973 -187258610 - L1P5 LINE L1 -3782 3085 2966 857 169 14 7 chr2 65997973 65998115 -187258468 - AluSg/x SINE Alu -26 286 144 10115 163 47 76 chr2 65998115 65999266 -187257317 - L1P5 LINE L1 -3901 2966 1817 1396 138 111 12 chr2 65999266 65999558 -187257025 - AluSg SINE Alu 0 319 3 10115 163 47 76 chr2 65999558 66000713 -187255870 - L1P5 LINE L1 -5050 1817 631 4103 148 6 4 chr2 66000714 66001409 -187255174 - L1P LINE L1 -1495 4651 3956 1754 112 112 4 chr2 66001413 66001681 -187254902 - AluSc SINE Alu -12 297 1 267 279 49 16 chr2 66001841 66001963 -187254620 + L1MC4 LINE L1 7916 8041 -1 283 300 153 58 chr2 66002106 66002545 -187254038 - L2 LINE L2 -452 2862 2329 2151 126 3 0 chr2 66002693 66002995 -187253588 + AluSx SINE Alu 1 303 -9 957 133 0 20 chr2 66003213 66003346 -187253237 + AluJb SINE Alu 163 294 -18 1718 146 23 49 chr2 66003346 66003654 -187252929 - AluSx SINE Alu -12 300 1 957 133 0 20 chr2 66003654 66003670 -187252913 + AluJb SINE Alu 294 309 -3 392 189 61 91 chr2 66003736 66003868 -187252715 + L1MC4 LINE L1 6825 6952 -1090 261 0 0 0 chr2 66003868 66003897 -187252686 + (CA)n Simple_repeat Simple_repeat 2 30 0 1804 247 91 19 chr2 66003908 66004805 -187251778 + L1ME3A LINE L1 4994 5965 -205 1173 193 33 9 chr2 66004806 66005019 -187251564 + AluJo SINE Alu 75 292 -20 1169 146 18 58 chr2 66005286 66005512 -187251071 + MER20 DNA MER1_type 3 219 0 809 259 44 0 chr2 66005518 66005723 -187250860 + MIR SINE MIR 36 249 -13 1593 192 23 10 chr2 66006222 66006524 -187250059 - AluJo SINE Alu -6 306 1 410 356 30 0 chr2 66006826 66006958 -187249625 - MIR SINE MIR -80 182 47 39 74 0 0 chr2 66007098 66007179 -187249404 + AT_rich Low_complexity Low_complexity 1 81 0 359 180 31 130 chr2 66007187 66007279 -187249304 - L1MC5 LINE L1 -52 7909 7838 2111 124 10 0 chr2 66007279 66007578 -187249005 - AluSx SINE Alu -10 302 1 359 180 31 130 chr2 66007578 66007646 -187248937 - L1MC5 LINE L1 -123 7838 7765 21 57 0 0 chr2 66007689 66007724 -187248859 + AT_rich Low_complexity Low_complexity 1 35 0 427 173 53 0 chr2 66008193 66008268 -187248315 + MER5A DNA MER1_type 28 106 -83 6455 226 118 44 chr2 66009182 66010546 -187246037 - L1ME1 LINE L1 -31 6529 5268 926 214 78 0 chr2 66010546 66010752 -187245831 + MER58A DNA MER1_type 3 224 0 6455 226 118 44 chr2 66010752 66011001 -187245582 - L1ME1 LINE L1 -1292 5268 5039 204 40 0 0 chr2 66011001 66011026 -187245557 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2069 99 0 11 chr2 66011026 66011309 -187245274 - AluSx SINE Alu -32 280 1 6455 226 118 44 chr2 66011309 66011460 -187245123 - L1ME1 LINE L1 -1521 5039 4901 2291 98 0 7 chr2 66011460 66011765 -187244818 + AluSx SINE Alu 1 303 -9 6455 226 118 44 chr2 66011765 66013470 -187243113 - L1ME1 LINE L1 -1659 4901 2798 361 271 29 7 chr2 66013454 66013594 -187242989 - L1ME1 LINE L1 -4457 2083 1941 * 1259 208 142 69 chr2 66013578 66013861 -187242722 - L1ME1 LINE L1 -4921 1619 1358 1856 139 0 61 chr2 66013861 66014171 -187242412 + AluJb SINE Alu 1 291 -21 1259 208 142 69 chr2 66014171 66014257 -187242326 - L1ME1 LINE L1 -5182 1358 1280 712 158 7 50 chr2 66014257 66014396 -187242187 - FLAM_A SINE Alu 0 133 1 1259 208 142 69 chr2 66014396 66014746 -187241837 - L1ME1 LINE L1 -5260 1280 890 254 313 12 12 chr2 66015145 66015228 -187241355 - L1ME1 LINE L1 -6437 103 21 771 228 106 15 chr2 66015556 66015817 -187240766 + L1MC4 LINE L1 6973 7220 -741 2102 129 0 19 chr2 66016766 66017076 -187239507 - AluSx SINE Alu -8 304 1 203 200 52 45 chr2 66019137 66019206 -187237377 - MIR SINE MIR -70 138 63 2788 125 2 32 chr2 66019266 66019707 -187236876 + MSTA LTR MaLR 1 428 0 900 213 121 16 chr2 66019738 66020109 -187236474 + L1M4c LINE L1 2035 2444 -3940 405 266 151 44 chr2 66020186 66020770 -187235813 - L1 LINE L1 -2135 4011 3336 2251 99 0 19 chr2 66021057 66021371 -187235212 - AluSg SINE Alu -2 308 1 2911 91 15 35 chr2 66021373 66021426 -187235157 - L1MA3 LINE L1 0 6305 6252 1674 139 59 7 chr2 66021426 66021699 -187234884 - AluSx SINE Alu -25 287 1 2911 91 15 35 chr2 66021699 66022109 -187234474 - L1MA3 LINE L1 -53 6252 5851 945 157 36 12 chr2 66022109 66022275 -187234308 + MER58B DNA MER1_type 172 341 0 292 279 86 18 chr2 66022282 66022562 -187234021 - L1 LINE L1 -2991 3155 2857 322 334 74 43 chr2 66022579 66022839 -187233744 - L1 LINE L1 -3312 2834 2555 1893 142 27 3 chr2 66022839 66023135 -187233448 + AluJb SINE Alu 1 303 -9 322 334 74 43 chr2 66023135 66023293 -187233290 - L1 LINE L1 -3591 2555 2403 429 288 26 4 chr2 66023322 66023551 -187233032 - L1 LINE L1 -3798 2348 2115 1325 134 104 4 chr2 66023638 66023869 -187232714 + 7SLRNA srpRNA srpRNA 59 312 -8 21 0 0 0 chr2 66024159 66024180 -187232403 + AT_rich Low_complexity Low_complexity 1 21 0 433 261 102 0 chr2 66024199 66024356 -187232227 - HAL1b LINE L1 -691 657 485 229 305 42 25 chr2 66024476 66024594 -187231989 + HAL1b LINE L1 273 392 -956 1704 174 7 7 chr2 66024905 66025198 -187231385 - AluJo SINE Alu -17 295 3 2322 101 13 0 chr2 66025269 66025575 -187231008 - AluSx SINE Alu -2 310 1 3711 199 71 32 chr2 66025866 66027219 -187229364 + L1MB7 LINE L1 4785 6174 -10 1887 147 0 7 chr2 66027232 66027505 -187229078 + AluJb SINE Alu 3 273 -39 2169 115 0 19 chr2 66027986 66028299 -187228284 + AluSq SINE Alu 1 307 -6 410 296 75 15 chr2 66028553 66028752 -187227831 - L1M4b LINE L1 -6617 242 32 962 239 30 0 chr2 66028938 66029135 -187227448 + MER58A DNA MER1_type 22 224 0 201 263 0 0 chr2 66029144 66029201 -187227382 + (TTA)n Simple_repeat Simple_repeat 2 58 0 36 62 0 0 chr2 66029320 66029384 -187227199 + AT_rich Low_complexity Low_complexity 1 64 0 22 0 0 0 chr2 66030104 66030126 -187226457 + AT_rich Low_complexity Low_complexity 1 22 0 8734 200 41 20 chr2 66030459 66031259 -187225324 - L1MB2 LINE L1 -24 6383 5601 1503 146 19 112 chr2 66031259 66031582 -187225001 - AluJb SINE Alu -19 293 1 8734 200 41 20 chr2 66031582 66033896 -187222687 - L1MB2 LINE L1 -806 5601 3197 528 98 43 33 chr2 66033899 66033968 -187222615 + MSTB LTR MaLR 1 70 -356 262 132 0 0 chr2 66033968 66034006 -187222577 - MSTA LTR MaLR 0 428 391 1232 197 5 0 chr2 66034009 66034227 -187222356 + AluJb SINE Alu 86 304 -8 890 147 21 0 chr2 66034227 66034370 -187222213 - MSTA LTR MaLR -34 394 249 * 1905 176 60 0 chr2 66034349 66034696 -187221887 + MSTA LTR MaLR 61 428 0 1223 201 20 7 chr2 66034705 66035008 -187221575 - L1MB2 LINE L1 -3195 3187 2881 981 140 0 6 chr2 66035020 66035177 -187221406 + L1PB4 LINE L1 5851 6006 -150 12574 222 54 35 chr2 66035205 66041892 -187214691 - L1PB4 LINE L1 -2 7114 258 3824 229 127 23 chr2 66041897 66043506 -187213077 - L1MB2 LINE L1 -3534 2848 1100 872 152 0 0 chr2 66043506 66043638 -187212945 - FLAM_C SINE Alu 0 133 2 3824 229 127 23 chr2 66043638 66044000 -187212583 - L1MB2 LINE L1 -5282 1100 777 403 286 46 33 chr2 66044329 66044542 -187212041 - L1PB4 LINE L1 -5738 1289 1 310 229 64 96 chr2 66044970 66045127 -187211456 - L2 LINE L2 -1 3312 3161 1852 147 3 20 chr2 66045151 66045457 -187211126 + AluJb SINE Alu 1 301 -11 22 35 0 0 chr2 66045621 66045650 -187210933 + AT_rich Low_complexity Low_complexity 1 29 0 320 321 80 0 chr2 66046002 66046114 -187210469 + Charlie8 DNA MER1_type 1 121 -2296 2369 73 3 3 chr2 66046116 66046417 -187210166 + AluY SINE Alu 1 301 -10 387 290 49 6 chr2 66046478 66046640 -187209943 + Charlie8 DNA MER1_type 95 263 -2154 1661 178 40 9 chr2 66046714 66047035 -187209548 + MER58B DNA MER1_type 11 341 0 417 220 77 0 chr2 66047201 66047292 -187209291 + MIR SINE MIR 40 137 -71 4903 105 20 36 chr2 66047420 66047700 -187208883 - L1PB1 LINE L1 -124 6027 5744 270 0 0 0 chr2 66047700 66047730 -187208853 + (CA)n Simple_repeat Simple_repeat 2 31 0 4903 105 20 36 chr2 66047730 66048353 -187208230 - L1PB1 LINE L1 -407 5744 5143 1831 135 99 23 chr2 66048353 66048738 -187207845 + Cheshire DNA MER1_type 1752 2165 -255 842 229 51 0 chr2 66049580 66049755 -187206828 - MER20 DNA MER1_type 0 219 36 319 233 7 27 chr2 66050234 66050397 -187206186 + MLT1H1 LTR MaLR 7 160 -395 669 254 65 16 chr2 66050712 66050897 -187205686 - MIR SINE MIR -56 206 13 1150 196 0 14 chr2 66051721 66051935 -187204648 - AluJo SINE Alu -18 294 84 200 246 277 0 chr2 66053526 66053591 -187202992 + MIR SINE MIR 32 114 -94 401 74 19 0 chr2 66053649 66053703 -187202880 + Tigger2 DNA MER2_type 1 55 -2663 926 133 77 0 chr2 66053703 66053846 -187202737 - FRAM SINE Alu -21 155 2 7152 135 28 14 chr2 66053857 66055030 -187201553 + Tigger2 DNA MER2_type 57 1246 -1472 4035 139 45 10 chr2 66055028 66055710 -187200873 + Tigger2 DNA MER2_type 2013 2718 0 * 277 308 35 49 chr2 66055712 66055855 -187200728 + L1ME LINE L1 5561 5701 -420 762 98 0 0 chr2 66055922 66056024 -187200559 - L1MA4A LINE L1 -365 5938 5837 942 187 128 15 chr2 66056024 66056227 -187200356 - MLT1E2 LTR MaLR -396 230 5 300 248 67 9 chr2 66056273 66056378 -187200205 - L1PB1 LINE L1 -1088 5058 4948 940 168 233 1 chr2 66056732 66056994 -187199589 + MSTA LTR MaLR 47 364 0 7031 137 52 98 chr2 66056996 66058524 -187198059 + MSTA-int LTR MaLR 3 1459 -121 3732 125 58 2 chr2 66058520 66059138 -187197445 + L1MA3 LINE L1 5513 6165 -140 * 319 133 13 27 chr2 66059119 66059194 -187197389 + L1MA3 LINE L1 5946 6019 -286 * 589 23 0 45 chr2 66059193 66059281 -187197302 + MSTA-int LTR MaLR 1493 1576 -4 2207 112 109 45 chr2 66059285 66059687 -187196896 + MSTA LTR MaLR 1 428 0 298 301 127 46 chr2 66059704 66061031 -187195552 - L1M4 LINE L1 -2332 3814 2380 21 0 0 0 chr2 66061464 66061485 -187195098 + AT_rich Low_complexity Low_complexity 1 21 0 2138 97 36 9 chr2 66061485 66061815 -187194768 - L1MA2 LINE L1 -4 6300 5962 246 105 0 0 chr2 66061943 66061981 -187194602 + (T)n Simple_repeat Simple_repeat 1 38 0 7464 32 0 0 chr2 66062003 66063449 -187193134 - L1PA4 LINE L1 0 6155 4713 201 121 0 0 chr2 66063459 66063492 -187193091 + (A)n Simple_repeat Simple_repeat 1 33 0 7290 46 13 0 chr2 66063511 66064565 -187192018 - L1PA5 LINE L1 -1 6153 5097 9862 55 53 0 chr2 66064565 66065853 -187190730 + L1PA5 LINE L1 3733 5088 -1058 213 358 51 7 chr2 66067585 66067722 -187188861 + MIR SINE MIR 115 257 -5 * 271 274 62 95 chr2 66067719 66067885 -187188698 + MIR SINE MIR 33 194 -68 895 184 0 13 chr2 66067885 66068037 -187188546 + FRAM SINE Alu 4 153 -13 271 274 62 95 chr2 66068037 66068049 -187188534 + MIR SINE MIR 194 205 -57 5636 201 23 5 chr2 66068553 66069869 -187186714 + L1 LINE L1 3115 4453 -1693 4739 155 26 12 chr2 66069978 66071410 -187185173 + L1PA16 LINE L1 4723 6162 -4 553 208 16 8 chr2 66071706 66071831 -187184752 + MER3 DNA MER1_type 37 162 -47 671 187 32 7 chr2 66071834 66071989 -187184594 + MER3 DNA MER1_type 2233 2391 0 311 186 0 0 chr2 66071989 66072046 -187184537 + MER3 DNA MER1_type 2529 2585 0 744 233 18 76 chr2 66072254 66072477 -187184106 + MER63A DNA MER1_type 1 210 0 761 84 0 0 chr2 66072629 66072736 -187183847 - AluY SINE Alu -12 299 193 284 284 116 52 chr2 66073442 66073597 -187182986 - MIR3 SINE MIR -12 196 32 1631 194 7 0 chr2 66073598 66073892 -187182691 - AluJo SINE Alu -16 296 1 1517 198 18 0 chr2 66075026 66075304 -187181279 - AluJo SINE Alu -24 288 6 277 213 97 58 chr2 66075451 66075606 -187180977 + L1ME4a LINE L1 5955 6115 -6 8749 150 24 5 chr2 66075807 66076248 -187180335 - L1M1 LINE L1 -491 5813 5382 2322 95 0 3 chr2 66076248 66076553 -187180030 - AluSx SINE Alu -8 304 1 8749 150 24 5 chr2 66076553 66078208 -187178375 - L1M1 LINE L1 -922 5382 3679 1472 158 73 0 chr2 66078364 66078611 -187177972 - AluJb SINE Alu -8 304 40 1061 191 68 29 chr2 66078732 66079010 -187177573 - L1MB2 LINE L1 0 6171 5883 1281 139 109 23 chr2 66079143 66079444 -187177139 + MSTA LTR MaLR 1 428 0 235 306 142 42 chr2 66079453 66079861 -187176722 - HAL1b LINE L1 -847 501 53 273 204 0 0 chr2 66081099 66081153 -187175430 - LTR54 LTR ERV1 -54 456 403 262 244 118 25 chr2 66081621 66081740 -187174843 + L1ME LINE L1 5692 5821 -341 34 55 0 0 chr2 66082013 66082068 -187174515 + AT_rich Low_complexity Low_complexity 1 55 0 27 49 0 0 chr2 66082222 66082263 -187174320 + AT_rich Low_complexity Low_complexity 1 41 0 27 0 0 0 chr2 66082304 66082331 -187174252 + AT_rich Low_complexity Low_complexity 1 27 0 34602 78 6 32 chr2 66082382 66087344 -187169239 + L1P LINE L1 1 4831 -1315 7016 51 7 7 chr2 66087345 66088772 -187167811 + L1PA5 LINE L1 4726 6151 -3 21 0 0 0 chr2 66088773 66088794 -187167789 + AT_rich Low_complexity Low_complexity 1 21 0 1251 219 59 6 chr2 66089134 66089458 -187167125 + MER58B DNA MER1_type 1 341 0 30 0 0 0 chr2 66090565 66090595 -187165988 + AT_rich Low_complexity Low_complexity 1 30 0 2119 75 0 25 chr2 66090595 66090876 -187165707 - AluSc SINE Alu -27 282 9 2271 88 3 13 chr2 66091769 66092076 -187164507 + AluSg SINE Alu 1 304 -6 3208 71 29 5 chr2 66092751 66093199 -187163384 - L1PA10 LINE L1 -1 6167 5709 712 239 97 13 chr2 66094709 66095018 -187161565 + MER20B DNA MER1_type 443 777 -6 1093 252 33 18 chr2 66095737 66096126 -187160457 - L1M4 LINE L1 -1144 5002 4608 5409 163 21 22 chr2 66096128 66097119 -187159464 + L1MC1 LINE L1 5331 6320 -13 1457 259 122 59 chr2 66097144 66098076 -187158507 + L1ME3A LINE L1 5176 6131 -39 266 262 272 5 chr2 66099641 66099843 -187156740 + MIR SINE MIR 7 262 0 227 106 106 43 chr2 66100709 66100756 -187155827 - Alu SINE Alu -249 50 1 673 170 9 0 chr2 66101133 66101245 -187155338 + AluJo SINE Alu 100 212 -100 933 134 72 14 chr2 66101490 66101782 -187154801 - L1P4 LINE L1 -705 5461 5157 * 4103 230 23 28 chr2 66101773 66102984 -187153599 + L1 LINE L1 2290 3494 -2652 15985 130 45 17 chr2 66103202 66104036 -187152547 + Tigger4(Zombi) DNA MER2_type 2 811 -1920 693 179 65 0 chr2 66104036 66104204 -187152379 - L1MA3 LINE L1 -1 6304 6126 15985 130 45 17 chr2 66104204 66106023 -187150560 + Tigger4(Zombi) DNA MER2_type 811 2731 0 1455 207 52 25 chr2 66106023 66106468 -187150115 - L1M4c LINE L1 -4005 2379 1923 2461 206 80 98 chr2 66106480 66107597 -187148986 - L1M4c LINE L1 -4748 1636 540 3989 177 19 11 chr2 66108001 66108725 -187147858 - MER44D DNA MER2_type -2 603 2 9593 181 31 14 chr2 66109246 66109749 -187146834 + L1PA16 LINE L1 3001 3494 -2672 2478 79 0 0 chr2 66109749 66110053 -187146530 - AluY SINE Alu -7 304 1 9593 181 31 14 chr2 66110053 66112664 -187143919 + L1PA16 LINE L1 3494 6166 0 731 184 44 0 chr2 66112783 66112941 -187143642 - L1MD1 LINE L1 -5 6237 6073 2450 255 75 43 chr2 66113056 66113609 -187142974 + L1ME3A LINE L1 3638 4172 -1974 2440 167 19 2 chr2 66113609 66114028 -187142555 + MSTB LTR MaLR 1 426 0 2450 255 75 43 chr2 66114028 66114649 -187141934 + L1ME3A LINE L1 4172 4850 -1296 2584 224 72 15 chr2 66114656 66115351 -187141232 + L1ME3A LINE L1 5428 6170 0 22 70 0 0 chr2 66117011 66117054 -187139529 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr2 66117873 66117894 -187138689 + AT_rich Low_complexity Low_complexity 1 21 0 411 274 167 28 chr2 66118588 66118803 -187137780 + L1MC/D LINE L1 5311 5555 -2253 2102 117 3 3 chr2 66118821 66119111 -187137472 - AluSg SINE Alu -20 290 1 536 202 71 0 chr2 66119130 66119229 -187137354 + MER58 DNA MER1_type 1 106 -2314 * 4003 144 103 43 chr2 66119223 66120084 -187136499 + Cheshire DNA MER1_type 1505 2417 -3 229 269 0 15 chr2 66120158 66120225 -187136358 + L1MC/D LINE L1 5688 5753 -2055 475 235 105 0 chr2 66120336 66120489 -187136094 - L1M4 LINE L1 -2391 3755 3587 237 254 98 49 chr2 66120504 66120748 -187135835 + L1M4 LINE L1 4430 4685 -1461 198 143 0 0 chr2 66120801 66120836 -187135747 + (A)n Simple_repeat Simple_repeat 1 35 0 496 179 0 0 chr2 66121083 66121161 -187135422 - FLAM_A SINE Alu -47 95 18 1776 213 50 11 chr2 66121520 66121901 -187134682 + MSTD LTR MaLR 1 396 0 187 279 0 0 chr2 66122163 66122206 -187134377 - L2 LINE L2 -6 3307 3265 685 250 41 12 chr2 66122206 66122378 -187134205 + MER69A DNA AcHobo 1 177 0 610 195 34 13 chr2 66122459 66122608 -187133975 + L1MA7 LINE L1 2210 2361 -3785 946 46 0 0 chr2 66122617 66122726 -187133857 + AluY SINE Alu 1 109 -202 11931 183 49 29 chr2 66122726 66124785 -187131798 + L1MA7 LINE L1 2371 4387 -1904 2058 115 0 0 chr2 66124785 66125063 -187131520 + AluSg SINE Alu 1 278 -32 189 0 0 0 chr2 66125063 66125084 -187131499 + (CAAT)n Simple_repeat Simple_repeat 4 24 0 11931 183 49 29 chr2 66125084 66126712 -187129871 + L1MA7 LINE L1 4387 6105 -186 1675 165 9 58 chr2 66126712 66127040 -187129543 - AluJb SINE Alu 0 312 1 11931 183 49 29 chr2 66127040 66127228 -187129355 + L1MA7 LINE L1 6105 6288 -3 9954 199 62 66 chr2 66128741 66132064 -187124519 + L1M1 LINE L1 2 3300 -3548 327 49 0 0 chr2 66132064 66132105 -187124478 + (CA)n Simple_repeat Simple_repeat 2 42 0 9954 199 62 66 chr2 66132105 66134054 -187122529 + L1M1 LINE L1 3300 5256 -1592 1057 176 21 0 chr2 66134069 66134262 -187122321 + L1PB1 LINE L1 1 197 -6666 * 13909 180 38 22 chr2 66134259 66136797 -187119786 + L1PB1 LINE L1 1392 3888 -2979 2152 83 4 0 chr2 66136797 66137062 -187119521 + AluY SINE Alu 1 266 -45 13909 180 38 22 chr2 66137062 66138401 -187118182 + L1PB1 LINE L1 3888 5204 -1663 2769 73 0 3 chr2 66138401 66138757 -187117826 - THE1A LTR MaLR 0 355 1 13909 180 38 22 chr2 66138757 66140235 -187116348 + L1PB1 LINE L1 5204 6867 0 1536 125 38 45 chr2 66140238 66140479 -187116104 + L1M1 LINE L1 5250 5490 -1358 2429 81 0 0 chr2 66140479 66140777 -187115806 + AluSg SINE Alu 4 301 -9 1536 125 38 45 chr2 66140777 66140848 -187115735 + L1M1 LINE L1 5490 5560 -1288 22 35 0 0 chr2 66140919 66140948 -187115635 + AT_rich Low_complexity Low_complexity 1 29 0 777 144 40 0 chr2 66141056 66141181 -187115402 + FRAM SINE Alu 35 164 -12 4388 69 126 2 chr2 66141247 66141859 -187114724 - LTR12 LTR ERV1 0 688 1 3119 106 7 5 chr2 66141859 66142301 -187114282 - HERV9 LTR ERV1 0 8399 7957 2231 101 0 26 chr2 66142401 66142709 -187113874 - AluSq SINE Alu -13 300 1 3104 151 22 32 chr2 66142711 66143649 -187112934 + L1M1 LINE L1 5594 6521 -481 775 234 138 66 chr2 66143756 66144416 -187112167 - L1ME LINE L1 -4738 1523 763 2043 161 0 0 chr2 66144654 66144965 -187111618 + AluSx SINE Alu 1 311 -1 1031 69 0 0 chr2 66144979 66145110 -187111473 + AluY SINE Alu 1 131 -180 5964 215 66 83 chr2 66145230 66145767 -187110816 - L1 LINE L1 -1241 4905 4361 2130 129 3 7 chr2 66145767 66146076 -187110507 - AluSx SINE Alu -4 308 1 5964 215 66 83 chr2 66146076 66147739 -187108844 - L1 LINE L1 -1785 4361 2757 2315 86 3 0 chr2 66147739 66148031 -187108552 - AluSx SINE Alu -19 293 1 5964 215 66 83 chr2 66148031 66148583 -187108000 - L1 LINE L1 -3389 2757 2197 10892 169 55 16 chr2 66149235 66150730 -187105853 + L1M4c LINE L1 26 1654 -4728 2000 129 10 23 chr2 66150730 66151040 -187105543 + AluSx SINE Alu 1 306 -6 10892 169 55 16 chr2 66151040 66152053 -187104530 + L1M4c LINE L1 1654 2626 -3756 1422 227 169 30 chr2 66152155 66153331 -187103252 + L1MEc LINE L1 1763 3046 -3169 * 2493 214 132 14 chr2 66153330 66154117 -187102466 + L1MC4 LINE L1 7021 7900 -142 1884 160 44 36 chr2 66155403 66155790 -187100793 + MLT1B LTR MaLR 1 390 0 1305 162 82 110 chr2 66156020 66156483 -187100100 - LTR7 LTR ERV1 0 450 1 973 179 30 0 chr2 66156506 66156674 -187099909 + AluJo SINE Alu 122 294 -18 289 183 56 0 chr2 66156723 66156794 -187099789 - L1M4 LINE L1 -3435 2711 2637 22 35 0 0 chr2 66156898 66156927 -187099656 + AT_rich Low_complexity Low_complexity 1 29 0 860 230 55 58 chr2 66156984 66157328 -187099255 + MER2 DNA MER2_type 2 344 0 596 205 33 8 chr2 66157451 66157573 -187099010 - FLAM_A SINE Alu -8 125 1 1137 218 14 0 chr2 66157653 66157869 -187098714 + MER58A DNA MER1_type 6 224 0 232 182 127 0 chr2 66157913 66157968 -187098615 + Tigger4(Zombi) DNA MER2_type 8 69 -2662 833 251 112 3 chr2 66158158 66158505 -187098078 + L1MEc LINE L1 1665 2049 -4347 450 139 152 0 chr2 66158506 66158585 -187097998 - Tigger7 DNA MER2_type -1 2486 2396 * 2754 170 11 26 chr2 66158584 66159113 -187097470 - Tigger7 DNA MER2_type -212 521 1 712 223 80 59 chr2 66159170 66159379 -187097204 + L1MEc LINE L1 2081 2284 -3931 2285 95 0 25 chr2 66159379 66159696 -187096887 + AluY SINE Alu 1 309 -2 712 223 80 59 chr2 66159696 66159921 -187096662 + L1MEc LINE L1 2284 2489 -3726 252 235 0 0 chr2 66159922 66159990 -187096593 + L1MEc LINE L1 2539 2606 -3609 3538 186 27 19 chr2 66160515 66161593 -187094990 - L1MA9 LINE L1 -274 6038 4956 1622 187 53 0 chr2 66161682 66161965 -187094618 - AluJb SINE Alu -9 303 6 340 298 84 35 chr2 66162023 66162308 -187094275 - HAL1b LINE L1 -825 523 225 643 248 33 67 chr2 66162332 66162631 -187093952 - L1ME1 LINE L1 -7 6159 5871 594 213 142 22 chr2 66162621 66162889 -187093694 - L1ME1 LINE L1 -221 5945 5646 * 275 138 35 0 chr2 66162898 66162956 -187093627 + (TATATG)n Simple_repeat Simple_repeat 6 65 0 1248 206 48 36 chr2 66163078 66163563 -187093020 - L1ME1 LINE L1 -535 5631 5145 644 221 29 7 chr2 66163580 66163720 -187092863 - FLAM_C SINE Alu 0 143 1 456 268 46 38 chr2 66163725 66163938 -187092645 - L1ME1 LINE L1 -1037 5109 4892 5543 65 22 11 chr2 66163938 66164695 -187091888 + MER4E LTR ERV1 1 766 0 456 268 46 38 chr2 66164695 66164720 -187091863 - L1ME1 LINE L1 -1254 4892 4869 701 239 59 37 chr2 66164737 66165044 -187091539 - L1ME1 LINE L1 -1398 4748 4436 402 112 0 90 chr2 66165044 66165133 -187091450 - MER4B LTR ERV1 0 610 530 2214 110 4 91 chr2 66165328 66165800 -187090783 + MER4A LTR ERV1 1 431 -233 547 184 57 25 chr2 66165810 66165968 -187090615 + MER4C LTR ERV1 277 439 -26 896 171 19 6 chr2 66166037 66166195 -187090388 - AluJb SINE Alu -16 296 137 1868 230 63 9 chr2 66166200 66166311 -187090272 - L1ME1 LINE L1 -1772 4374 4270 4118 80 9 4 chr2 66166311 66166862 -187089721 + MER41A LTR ERV1 1 554 0 1868 230 63 9 chr2 66166862 66167293 -187089290 - L1ME1 LINE L1 -1876 4270 3803 301 163 58 23 chr2 66167334 66167420 -187089163 - L1MB3 LINE L1 -4 6179 6091 864 132 21 79 chr2 66167593 66167782 -187088801 + L1PA15 LINE L1 5985 6162 -3 287 267 74 0 chr2 66167801 66167936 -187088647 + HAL1 LINE L1 1428 1572 -935 937 211 0 0 chr2 66167962 66168171 -187088412 - L1P LINE L1 -1002 5144 4936 1635 81 29 0 chr2 66168401 66168610 -187087973 - AluY SINE Alu -96 215 1 235 315 0 0 chr2 66168635 66168724 -187087859 + L1M4 LINE L1 2676 2764 -3382 398 255 107 5 chr2 66168784 66169000 -187087583 + L1M4 LINE L1 2870 3107 -3039 * 1446 247 98 27 chr2 66168999 66170010 -187086573 + L1MEc LINE L1 1543 2585 -3630 250 203 0 17 chr2 66170163 66170222 -187086361 + (TA)n Simple_repeat Simple_repeat 1 58 0 351 0 0 0 chr2 66170225 66170264 -187086319 + (TG)n Simple_repeat Simple_repeat 2 40 0 422 218 0 18 chr2 66170734 66170844 -187085739 - L1MA10 LINE L1 -2 6332 6225 5324 83 95 1 chr2 66170844 66171599 -187084984 + LTR12 LTR ERV1 1 826 0 12294 112 15 19 chr2 66171599 66174334 -187082249 + HERV9 LTR ERV1 1 2870 -5529 183 229 197 0 chr2 66174334 66174395 -187082188 + L2 LINE L2 355 427 -2887 12294 112 15 19 chr2 66174395 66174664 -187081919 + HERV9 LTR ERV1 2870 3139 -5260 4608 94 0 11 chr2 66174672 66175339 -187081244 + HERV9 LTR ERV1 4081 4740 -3659 433 222 6 6 chr2 66175352 66175514 -187081069 + GA-rich Low_complexity Low_complexity 1 162 0 5971 191 16 28 chr2 66175998 66177476 -187079107 + L1MEc LINE L1 3341 4799 -1416 2073 167 114 2 chr2 66177480 66177893 -187078690 - LTR32 LTR ERVL 0 471 13 660 265 20 20 chr2 66177893 66178097 -187078486 - HERVL32 LTR ERVL 0 3418 3215 1045 306 58 15 chr2 66178201 66178750 -187077833 - PRIMA41-int LTR ERV1 -448 7308 6736 1232 178 102 69 chr2 66178750 66179166 -187077417 + MLT2A2 LTR ERVL 1 426 -128 378 315 37 32 chr2 66179457 66179848 -187076735 - HERVL18 LTR ERVL -1832 3526 3197 1056 238 70 16 chr2 66179885 66180200 -187076383 - HERVL18 LTR ERVL -205 3213 2882 3464 128 115 0 chr2 66180202 66180751 -187075832 + LTR9 LTR ERV1 1 612 0 602 90 30 20 chr2 66180762 66180862 -187075721 + HUERS-P3 LTR ERV1 11 111 -8808 2543 158 35 24 chr2 66180864 66181356 -187075227 + HUERS-P3 LTR ERV1 273 769 -8150 * 11672 134 20 26 chr2 66181353 66183388 -187073195 + HUERS-P3b LTR ERV1 619 2642 -4776 444 110 96 0 chr2 66183389 66183462 -187073121 - LTR8 LTR ERV1 -251 440 361 2441 191 77 43 chr2 66183556 66184210 -187072373 - HERVL18 LTR ERVL -563 2855 2180 2832 131 10 18 chr2 66184210 66184720 -187071863 + L1PB4 LINE L1 5281 5786 -370 11143 84 33 9 chr2 66184721 66186336 -187070247 + L1PA7 LINE L1 1 1654 -4807 15369 81 6 1 chr2 66186337 66189337 -187067246 + L1PA7 LINE L1 3453 6465 -4 1742 189 51 3 chr2 66189337 66189699 -187066884 + L1PB4 LINE L1 5769 6156 0 1079 212 115 44 chr2 66189740 66189815 -187066768 + L1M4 LINE L1 2426 2494 -3652 713 205 0 0 chr2 66189815 66189937 -187066646 + FLAM_A SINE Alu 4 125 -8 1079 212 115 44 chr2 66189937 66190356 -187066227 + L1M4 LINE L1 2494 2955 -3191 203 275 0 0 chr2 66190356 66190396 -187066187 + MIR SINE MIR 22 61 -201 440 296 97 11 chr2 66190555 66190741 -187065842 - MIR SINE MIR -15 247 46 736 194 104 0 chr2 66190896 66191125 -187065458 + MER58B DNA MER1_type 2 289 -52 982 192 0 24 chr2 66191131 66191298 -187065285 + AluJo SINE Alu 122 284 -28 180 0 0 0 chr2 66191316 66191336 -187065247 + (CAAG)n Simple_repeat Simple_repeat 2 21 0 239 128 0 0 chr2 66191336 66191375 -187065208 + MER58B DNA MER1_type 292 330 -11 205 396 11 0 chr2 66191390 66191481 -187065102 + L2 LINE L2 2715 2806 -508 321 26 0 0 chr2 66194287 66194325 -187062258 + (TA)n Simple_repeat Simple_repeat 2 39 0 2223 90 10 0 chr2 66194325 66194614 -187061969 - AluSc SINE Alu -17 292 1 1678 148 36 14 chr2 66194619 66194896 -187061687 - AluJb SINE Alu -17 295 13 227 319 113 36 chr2 66194980 66195281 -187061302 + L2 LINE L2 1987 2310 -1004 303 249 140 75 chr2 66195795 66196199 -187060384 + L1MEd LINE L1 561 1024 -5095 1342 206 27 40 chr2 66196199 66196500 -187060083 - AluJo SINE Alu -15 297 1 303 249 140 75 chr2 66196500 66196746 -187059837 + L1MEd LINE L1 1024 1253 -4866 1740 177 0 3 chr2 66196826 66197130 -187059453 + AluSx SINE Alu 20 312 0 3480 162 19 133 chr2 66197145 66197635 -187058948 + L1P4 LINE L1 4156 4700 -1465 1371 98 0 8 chr2 66197635 66197861 -187058722 + AluSq SINE Alu 1 298 -15 3480 162 19 133 chr2 66197861 66198832 -187057751 + L1P4 LINE L1 4700 5623 -542 3182 236 89 48 chr2 66198953 66199649 -187056934 - L1M4c LINE L1 -3943 2703 2037 1878 119 14 25 chr2 66199649 66199926 -187056657 - AluSx SINE Alu -19 293 20 3182 236 89 48 chr2 66199926 66201757 -187054826 - L1M4c LINE L1 -4609 2037 2 600 317 66 33 chr2 66201798 66202041 -187054542 + LTR16B LTR ERVL 17 267 -197 542 344 69 9 chr2 66202083 66202429 -187054154 + HERV16 LTR ERVL 266 632 -4364 1355 270 56 7 chr2 66202490 66202901 -187053682 + HERV16 LTR ERVL 733 1163 -3833 509 326 43 11 chr2 66203046 66203233 -187053350 + LTR16B LTR ERVL 2 194 -270 830 325 47 18 chr2 66203243 66203695 -187052888 - L1MEc LINE L1 -5918 478 14 1019 254 11 34 chr2 66203727 66203889 -187052694 - MIR SINE MIR 0 262 107 924 158 68 0 chr2 66203889 66204066 -187052517 - MER53 DNA DNA 0 189 1 1019 254 11 34 chr2 66204066 66204171 -187052412 - MIR SINE MIR -155 107 1 354 308 131 51 chr2 66204715 66204952 -187051631 - MIR SINE MIR -1 261 6 29 47 0 0 chr2 66205997 66206040 -187050543 + AT_rich Low_complexity Low_complexity 1 43 0 3639 57 2 0 chr2 66206628 66207086 -187049497 + L1PA6 LINE L1 5692 6150 -4 22 0 0 0 chr2 66207535 66207557 -187049026 + AT_rich Low_complexity Low_complexity 1 22 0 2161 124 0 0 chr2 66207614 66207919 -187048664 - AluSx SINE Alu 0 305 1 5725 118 25 14 chr2 66207919 66208940 -187047643 - L1PA16 LINE L1 -12 6154 5121 8097 141 17 3 chr2 66209627 66211270 -187045313 + L1PA12 LINE L1 106 2323 -5258 227 247 78 0 chr2 66211251 66211328 -187045255 - L1MC4 LINE L1 -1346 6696 6614 * 288 130 0 0 chr2 66211328 66211374 -187045209 + (TG)n Simple_repeat Simple_repeat 2 47 0 6818 237 11 16 chr2 66211376 66212234 -187044349 + L1P LINE L1 2712 3573 -4011 2106 122 3 29 chr2 66212234 66212546 -187044037 + AluSx SINE Alu 1 304 -8 6818 237 11 16 chr2 66212546 66213441 -187043142 + L1P LINE L1 3573 4456 -3128 5942 87 45 7 chr2 66213441 66214891 -187041692 + L1PA14 LINE L1 4669 6161 0 1455 179 43 0 chr2 66215120 66215377 -187041206 - AluJo SINE Alu -30 282 15 209 143 39 52 chr2 66215692 66215769 -187040814 + CT-rich Low_complexity Low_complexity 4 79 0 2182 188 54 7 chr2 66215964 66216405 -187040178 + L1MC/D LINE L1 5303 5764 -595 2114 120 0 3 chr2 66216433 66216724 -187039859 + AluSg SINE Alu 1 290 -20 202 295 115 0 chr2 66218071 66218132 -187038451 + L2 LINE L2 3244 3311 -2 1349 125 43 31 chr2 66218576 66218832 -187037751 - L1MA4 LINE L1 -11 6289 6031 225 0 0 0 chr2 66218912 66218937 -187037646 + (TG)n Simple_repeat Simple_repeat 2 26 0 233 216 20 0 chr2 66218938 66218989 -187037594 + GA-rich Low_complexity Low_complexity 3 54 0 958 131 0 15 chr2 66219303 66219440 -187037143 - FRAM SINE Alu -18 158 24 1382 237 147 53 chr2 66219730 66219951 -187036632 - HAL1b LINE L1 0 1348 1149 1762 159 18 0 chr2 66219951 66220234 -187036349 + AluJb SINE Alu 1 288 -24 1382 237 147 53 chr2 66220234 66220529 -187036054 - HAL1b LINE L1 -199 1149 883 825 199 12 0 chr2 66220529 66220695 -187035888 + FAM SINE Alu 1 168 -7 1382 237 147 53 chr2 66220695 66220965 -187035618 - HAL1b LINE L1 -465 883 487 862 223 49 5 chr2 66221495 66221679 -187034904 - MER58A DNA MER1_type -3 221 30 231 171 24 0 chr2 66222669 66222710 -187033873 - L3 LINE CR1 -1 1576 1535 666 223 6 32 chr2 66222824 66222981 -187033602 + MER106B DNA MER1_type 2 154 -905 23 33 0 0 chr2 66222994 66223024 -187033559 + AT_rich Low_complexity Low_complexity 1 30 0 248 139 0 23 chr2 66223025 66223068 -187033515 + MER106B DNA MER1_type 1018 1059 0 464 256 18 65 chr2 66223127 66223295 -187033288 - MIR SINE MIR 0 262 103 343 247 187 12 chr2 66223488 66223654 -187032929 + MIR SINE MIR 42 236 -26 222 149 0 21 chr2 66223672 66223719 -187032864 + (TA)n Simple_repeat Simple_repeat 2 47 0 436 188 24 0 chr2 66223753 66223838 -187032745 + L1MC1 LINE L1 6240 6326 -7 536 228 13 125 chr2 66224003 66224235 -187032348 + L1ME LINE L1 5578 5783 -338 2220 106 0 0 chr2 66224922 66225260 -187031323 - AluSx SINE Alu 0 338 1 27 0 0 0 chr2 66225260 66225287 -187031296 + AT_rich Low_complexity Low_complexity 1 27 0 407 153 0 0 chr2 66225287 66225346 -187031237 - FRAM/FAM SINE Alu -105 71 13 367 280 55 6 chr2 66227263 66227445 -187029138 - L1MEd LINE L1 -2614 3515 3325 1533 277 90 6 chr2 66227708 66228221 -187028362 + L2 LINE L2 2331 2886 -428 276 310 16 47 chr2 66228443 66228572 -187028011 + L2 LINE L2 3051 3175 -138 2025 154 39 74 chr2 66228572 66229006 -187027577 - MSTB LTR MaLR 0 426 8 284 235 136 0 chr2 66229016 66229097 -187027486 + L2 LINE L2 3221 3312 -1 442 274 154 48 chr2 66229122 66229476 -187027107 - L1MEd LINE L1 -3403 2726 2314 2210 109 3 6 chr2 66229476 66229789 -187026794 + AluSp SINE Alu 1 312 -1 442 274 154 48 chr2 66229789 66229876 -187026707 - L1MEd LINE L1 -3815 2314 2238 1661 160 22 32 chr2 66229878 66230191 -187026392 - AluJo SINE Alu -2 310 1 435 330 71 24 chr2 66230768 66231065 -187025518 - L1MEd LINE L1 -5768 351 41 25 31 0 0 chr2 66232036 66232068 -187024515 + AT_rich Low_complexity Low_complexity 1 32 0 24 53 0 0 chr2 66232321 66232359 -187024224 + AT_rich Low_complexity Low_complexity 1 38 0 337 315 109 11 chr2 66233743 66233927 -187022656 + MIR SINE MIR 20 221 -41 252 235 0 0 chr2 66234064 66234132 -187022451 + (TA)n Simple_repeat Simple_repeat 1 68 0 52 0 0 0 chr2 66234137 66234189 -187022394 + AT_rich Low_complexity Low_complexity 1 52 0 182 232 54 0 chr2 66234539 66234595 -187021988 - MIR SINE MIR -110 152 94 1729 131 71 11 chr2 66237090 66237373 -187019210 + AluSx SINE Alu 1 300 -12 351 281 33 43 chr2 66239733 66239934 -187016649 + L1MEc LINE L1 1461 1820 -4787 1774 191 45 48 chr2 66239959 66240069 -187016514 + L1MEc LINE L1 2706 2815 -3611 1695 170 7 0 chr2 66240069 66240345 -187016238 + AluSx SINE Alu 3 280 -32 189 0 0 0 chr2 66240345 66240366 -187016217 + (CAAT)n Simple_repeat Simple_repeat 4 24 0 1774 191 45 48 chr2 66240366 66240771 -187015812 + L1MEc LINE L1 2813 3220 -3206 5658 205 101 53 chr2 66240772 66241239 -187015344 + L1MEc LINE L1 3375 3818 -2628 630 222 0 8 chr2 66241239 66241365 -187015218 + FLAM_A SINE Alu 1 125 -8 5658 205 101 53 chr2 66241365 66243478 -187013105 + L1MEc LINE L1 3818 6086 -360 * 5929 199 21 11 chr2 66243451 66244754 -187011829 + L1P LINE L1 3601 4916 -1510 684 91 0 0 chr2 66244778 66244866 -187011717 + L1PA6 LINE L1 11 98 -6048 * 32805 73 6 7 chr2 66244864 66250177 -187006406 + L1PA6 LINE L1 847 6154 0 917 219 11 94 chr2 66250176 66250198 -187006385 + L1ME2 LINE L1 5754 5776 -388 * 5743 113 16 6 chr2 66250198 66251685 -187004898 + L1PA15 LINE L1 4632 6159 -6 917 219 11 94 chr2 66251685 66251880 -187004703 + L1ME2 LINE L1 5776 5986 -178 2052 133 16 0 chr2 66251880 66252196 -187004387 - L1PB4 LINE L1 -8 6148 5828 917 219 11 94 chr2 66252196 66252372 -187004211 + L1ME2 LINE L1 5986 6096 -68 2129 113 3 7 chr2 66252372 66252665 -187003918 - AluSq SINE Alu -21 292 1 917 219 11 94 chr2 66252665 66252721 -187003862 + L1ME2 LINE L1 6096 6155 -9 2328 102 3 0 chr2 66253295 66253628 -187002955 - L1PA14 LINE L1 0 6161 5828 610 343 158 30 chr2 66253628 66254914 -187001669 - L2 LINE L2 -571 2743 1293 185 238 12 0 chr2 66256207 66256287 -187000296 + GA-rich Low_complexity Low_complexity 1 81 0 22 0 0 0 chr2 66256739 66256761 -186999822 + AT_rich Low_complexity Low_complexity 1 22 0 1463 0 0 119 chr2 66256914 66257202 -186999381 + L1P4 LINE L1 4980 5276 -885 6516 75 13 12 chr2 66257202 66258128 -186998455 + L1PA8 LINE L1 4565 5491 -681 1855 125 0 97 chr2 66258128 66258449 -186998134 + AluJb SINE Alu 1 290 -22 6516 75 13 12 chr2 66258449 66259130 -186997453 + L1PA8 LINE L1 5491 6170 -2 1463 0 0 119 chr2 66259130 66259289 -186997294 + L1P4 LINE L1 5276 5470 -691 735 55 0 0 chr2 66259289 66259380 -186997203 - AluY SINE Alu -22 289 199 4947 91 13 1 chr2 66259382 66260074 -186996509 + L1PA14 LINE L1 5461 6160 -1 22 0 0 0 chr2 66260094 66260116 -186996467 + AT_rich Low_complexity Low_complexity 1 22 0 1145 186 61 30 chr2 66261990 66262169 -186994414 - MER8 DNA MER2_type -1 238 49 486 0 0 0 chr2 66262169 66262223 -186994360 + (TG)n Simple_repeat Simple_repeat 2 55 0 1145 186 61 30 chr2 66262223 66262274 -186994309 - MER8 DNA MER2_type -190 49 1 525 220 72 76 chr2 66262478 66262742 -186993841 + L1MD3 LINE L1 6096 7995 0 290 282 39 13 chr2 66263008 66263086 -186993497 - L2 LINE L2 -5 3308 3229 1944 200 73 45 chr2 66263110 66263663 -186992920 - MER39 LTR ERV1 0 707 1 613 302 157 20 chr2 66263714 66264092 -186992491 - L2 LINE L2 -178 3135 2709 3429 208 142 8 chr2 66264718 66265730 -186990853 + L1PB1 LINE L1 8 1155 -5708 14885 190 20 19 chr2 66265746 66270161 -186986422 + L1PB1 LINE L1 1321 5797 -1070 2080 81 52 4 chr2 66270161 66270459 -186986124 + AluY SINE Alu 1 311 0 14885 190 20 19 chr2 66270459 66271532 -186985051 + L1PB1 LINE L1 5797 6867 0 1635 170 11 7 chr2 66271748 66272024 -186984559 + AluJo SINE Alu 24 300 -12 555 268 78 6 chr2 66272094 66272273 -186984310 - MIR SINE MIR -39 223 32 2264 115 0 3 chr2 66272836 66273140 -186983443 - AluSx SINE Alu -3 309 7 2335 88 0 0 chr2 66273173 66273467 -186983116 - AluSg SINE Alu -16 294 1 259 301 170 0 chr2 66273620 66273773 -186982810 + MIR SINE MIR 84 262 0 25 31 0 0 chr2 66274061 66274093 -186982490 + AT_rich Low_complexity Low_complexity 1 32 0 211 36 55 36 chr2 66274371 66274426 -186982157 + (TTATA)n Simple_repeat Simple_repeat 1 56 0 2315 99 0 0 chr2 66275783 66276085 -186980498 - AluSg1 SINE Alu -7 302 1 2034 128 3 34 chr2 66276886 66277206 -186979377 + AluSp SINE Alu 1 310 -3 573 263 114 21 chr2 66277352 66277739 -186978844 - L1ME3A LINE L1 -222 5940 5502 937 208 5 5 chr2 66278045 66278257 -186978326 + L1M4 LINE L1 4783 4994 -1152 2394 237 59 55 chr2 66278541 66279579 -186977004 + L1MC5 LINE L1 6480 7531 -430 444 269 50 50 chr2 66279666 66279867 -186976716 + L1ME3A LINE L1 5963 6163 -7 1230 317 13 18 chr2 66280498 66280880 -186975703 + L1PA16 LINE L1 789 1168 -6406 230 290 11 21 chr2 66281028 66281121 -186975462 + L1PA16 LINE L1 1283 1374 -6200 380 291 9 31 chr2 66281146 66281367 -186975216 + L1PA16 LINE L1 2085 2306 -5268 10867 209 88 31 chr2 66281589 66282700 -186973883 + L1PA16 LINE L1 2189 3236 -4368 2158 88 0 14 chr2 66282700 66283007 -186973576 + AluSg SINE Alu 1 303 0 10867 209 88 31 chr2 66283007 66286619 -186969964 + L1PA16 LINE L1 3236 7256 -348 432 0 0 0 chr2 66286619 66286667 -186969916 + (CA)n Simple_repeat Simple_repeat 2 49 0 10867 209 88 31 chr2 66286667 66287035 -186969548 + L1PA16 LINE L1 7256 7602 -2 26 0 0 0 chr2 66287102 66287128 -186969455 + AT_rich Low_complexity Low_complexity 1 26 0 2260 89 0 0 chr2 66287244 66287526 -186969057 + AluSc SINE Alu 1 282 -27 680 179 117 19 chr2 66287825 66287987 -186968596 - MER5B DNA MER1_type 0 178 1 205 300 150 33 chr2 66289039 66289159 -186967424 + L2 LINE L2 3133 3266 -6 248 304 17 70 chr2 66289386 66289536 -186967047 - MIR3 SINE MIR -7 201 60 198 289 0 0 chr2 66289865 66289917 -186966666 + L2 LINE L2 3261 3312 -1 425 254 239 0 chr2 66290011 66290220 -186966363 - MIR SINE MIR -1 261 3 22 35 0 0 chr2 66292398 66292427 -186964156 + AT_rich Low_complexity Low_complexity 1 29 0 516 271 144 35 chr2 66295585 66295814 -186960769 + MIR SINE MIR 2 255 -7 213 213 0 0 chr2 66298193 66298240 -186958343 + L2 LINE L2 3263 3309 -4 433 272 37 43 chr2 66298295 66298457 -186958126 - L3 LINE CR1 -47 1530 1370 819 233 112 4 chr2 66298790 66299022 -186957561 + MIR SINE MIR 6 262 0 193 348 112 0 chr2 66299280 66299369 -186957214 - L3 LINE CR1 -1415 162 64 2039 260 136 29 chr2 66299746 66300819 -186955764 - L2 LINE L2 0 3313 2105 218 340 64 32 chr2 66302599 66302693 -186953890 - MIR SINE MIR -92 116 20 1070 167 5 16 chr2 66302812 66302998 -186953585 + MER1B DNA MER1_type 1 184 -113 323 192 13 64 chr2 66302997 66303075 -186953508 + MER20 DNA MER1_type 6 79 -140 * 336 258 113 0 chr2 66304330 66304454 -186952129 + L1MC4a LINE L1 5770 5907 -1901 25 31 0 0 chr2 66304637 66304669 -186951914 + AT_rich Low_complexity Low_complexity 1 32 0 288 0 0 0 chr2 66305083 66305115 -186951468 + (CA)n Simple_repeat Simple_repeat 2 33 0 3208 118 14 0 chr2 66305284 66305792 -186950791 + L1MA7 LINE L1 5769 6283 -8 2163 246 245 24 chr2 66306002 66307406 -186949177 + L1M2b LINE L1 1 1864 -5345 3424 181 33 5 chr2 66307506 66308264 -186948319 - L1M2 LINE L1 -4025 2824 2046 2817 84 5 0 chr2 66308264 66308647 -186947936 - L1PA6 LINE L1 0 6154 5770 11820 43 1 0 chr2 66308669 66310890 -186945693 - L1PA5 LINE L1 -8 6146 3937 24 32 0 0 chr2 66311075 66311106 -186945477 + AT_rich Low_complexity Low_complexity 1 31 0 233 71 0 0 chr2 66311466 66311494 -186945089 + LTR47A LTR ERVL 4 31 -421 2315 142 69 9 chr2 66311494 66311916 -186944667 + LTR47A LTR ERVL 4 450 -2 270 81 0 0 chr2 66314136 66314173 -186942410 + (TG)n Simple_repeat Simple_repeat 2 38 0 681 193 7 21 chr2 66314612 66314752 -186941831 + FLAM_C SINE Alu 1 138 -5 1978 111 32 3 chr2 66314899 66315214 -186941369 + L1MC1 LINE L1 5803 6126 -207 1564 174 34 4 chr2 66316583 66317062 -186939521 - L1P4 LINE L1 -688 5478 4985 2156 120 7 0 chr2 66317062 66317370 -186939213 - AluSx SINE Alu -2 310 1 9912 97 12 3 chr2 66317956 66319378 -186937205 + L1P LINE L1 263 1697 -4449 236 227 82 62 chr2 66319658 66319755 -186936828 + L3b LINE CR1 1419 1517 -66 826 260 48 20 chr2 66320343 66320593 -186935990 - MIR SINE MIR 0 262 6 1187 134 5 11 chr2 66321297 66321483 -186935100 + AluSg/x SINE Alu 116 300 -12 444 229 59 0 chr2 66321484 66321611 -186934972 + L1ME LINE L1 5481 5614 -552 228 35 0 0 chr2 66321944 66321973 -186934610 + (T)n Simple_repeat Simple_repeat 1 29 0 357 384 65 4 chr2 66323951 66324230 -186932353 + L2 LINE L2 2365 2660 -654 181 0 69 0 chr2 66324612 66324641 -186931942 + (CAAT)n Simple_repeat Simple_repeat 4 34 0 291 283 0 87 chr2 66324783 66324921 -186931662 + MIR SINE MIR 20 145 -63 23 54 0 0 chr2 66326064 66326101 -186930482 + AT_rich Low_complexity Low_complexity 1 37 0 863 172 35 75 chr2 66326368 66326514 -186930069 - MSTA LTR MaLR -210 218 83 2229 124 65 0 chr2 66326514 66326868 -186929715 - MER51B LTR ERV1 0 377 1 863 172 35 75 chr2 66326868 66326948 -186929635 - MSTA LTR MaLR -345 83 1 1480 194 11 11 chr2 66326978 66327261 -186929322 - AluJo SINE Alu -12 300 18 513 380 48 29 chr2 66327282 66327701 -186928882 - L1MEc LINE L1 -5828 568 142 374 272 54 31 chr2 66327897 66328086 -186928497 - MLT1J1 LTR MaLR -225 286 56 1078 153 6 0 chr2 66328765 66328942 -186927641 - AluSg/x SINE Alu -9 303 126 291 104 0 0 chr2 66328942 66328990 -186927593 + (TTTA)n Simple_repeat Simple_repeat 4 51 0 2099 64 14 3 chr2 66328991 66329273 -186927310 - AluY SINE Alu -26 285 1 563 295 52 16 chr2 66329970 66330163 -186926420 - MLT1J2 LTR MaLR 0 450 251 6586 159 2 30 chr2 66330407 66331687 -186924896 + L1P LINE L1 876 2120 -4026 1167 208 17 20 chr2 66331787 66332080 -186924503 - L1 LINE L1 -3092 3054 2763 23 54 0 0 chr2 66333323 66333360 -186923223 + AT_rich Low_complexity Low_complexity 1 37 0 321 304 49 20 chr2 66333519 66333723 -186922860 - L1PBa LINE L1 -5737 1126 917 1208 228 114 7 chr2 66333804 66334226 -186922357 - Charlie2b DNA MER1_type -576 2206 1820 854 319 143 3 chr2 66334299 66334656 -186921927 + LTR33 LTR ERVL 103 509 -12 270 276 77 64 chr2 66334616 66334772 -186921811 - Charlie2b DNA MER1_type -974 1808 1651 * 4460 196 23 28 chr2 66335041 66336056 -186920527 + L1MA9 LINE L1 5303 6312 0 190 365 82 32 chr2 66336882 66337101 -186919482 + L2 LINE L2 2702 2931 -383 3770 132 52 18 chr2 66338301 66338977 -186917606 + MER4A-int LTR ERV1 5899 6597 -1 449 187 0 22 chr2 66338986 66339077 -186917506 + MER4A LTR ERV1 1 89 -575 1782 142 10 24 chr2 66339118 66339414 -186917169 + MER4A LTR ERV1 373 664 0 355 255 205 30 chr2 66339673 66339873 -186916710 - MIR SINE MIR -26 236 2 258 316 58 50 chr2 66340071 66340210 -186916373 + MIR SINE MIR 97 236 -26 233 290 19 56 chr2 66340310 66340417 -186916166 + MER5A DNA MER1_type 10 112 -77 2007 109 7 13 chr2 66340600 66340902 -186915681 + MER41-int LTR ERV1 4883 5182 -764 2120 112 3 0 chr2 66340902 66341223 -186915360 - AluSq SINE Alu 0 322 1 21 0 0 0 chr2 66343434 66343455 -186913128 + AT_rich Low_complexity Low_complexity 1 21 0 1863 215 25 18 chr2 66343759 66344353 -186912230 - MER82 DNA MER2_type -1 652 1 682 267 77 51 chr2 66346321 66346632 -186909951 + MLT1J1 LTR MaLR 1 319 -127 27 29 0 0 chr2 66346894 66346928 -186909655 + AT_rich Low_complexity Low_complexity 1 34 0 479 310 37 42 chr2 66347724 66347940 -186908643 + MLT1L LTR MaLR 37 251 -364 1769 119 0 16 chr2 66348187 66348440 -186908143 - THE1C LTR MaLR -126 249 1 348 226 21 0 chr2 66349889 66349961 -186906622 + FLAM_A SINE Alu 52 101 -201 399 21 0 0 chr2 66349961 66350009 -186906574 + (GGAA)n Simple_repeat Simple_repeat 3 50 0 348 226 21 0 chr2 66350009 66350032 -186906551 + FLAM_A SINE Alu 101 122 -180 1132 177 10 0 chr2 66350411 66350620 -186905963 - L1 LINE L1 -2023 4123 3913 2207 144 28 46 chr2 66351212 66351648 -186904935 - MSTC LTR MaLR 0 428 1 282 29 0 0 chr2 66351790 66351825 -186904758 + (TTTTG)n Simple_repeat Simple_repeat 3 37 0 13339 49 3 1 chr2 66351994 66353691 -186902892 - L1P LINE L1 -1281 4865 3165 235 210 12 49 chr2 66353882 66353963 -186902620 - L1MC4 LINE L1 -1351 6691 6614 201 360 90 0 chr2 66353966 66354055 -186902528 - L2 LINE L2 -33 3239 3143 245 270 0 16 chr2 66355216 66355279 -186901304 - MIR SINE MIR -87 175 114 306 175 12 25 chr2 66355527 66355607 -186900976 - L1MB8 LINE L1 0 6178 6100 33 0 0 0 chr2 66355620 66355653 -186900930 + AT_rich Low_complexity Low_complexity 1 33 0 1178 192 54 0 chr2 66355656 66355896 -186900687 - L1MA6 LINE L1 -9 6291 6039 2277 105 17 0 chr2 66356270 66356614 -186899969 - THE1A LTR MaLR -5 350 1 34 24 0 0 chr2 66356913 66356954 -186899629 + AT_rich Low_complexity Low_complexity 1 41 0 329 206 6 42 chr2 66357235 66357400 -186899183 + CT-rich Low_complexity Low_complexity 2 160 0 22 56 0 0 chr2 66357786 66357822 -186898761 + AT_rich Low_complexity Low_complexity 1 36 0 409 272 8 0 chr2 66358692 66358817 -186897766 + L1MEc LINE L1 105 230 -6166 188 151 0 38 chr2 66359162 66359215 -186897368 + T-rich Low_complexity Low_complexity 5 55 0 1388 168 38 7 chr2 66359221 66359512 -186897071 + L1P LINE L1 3782 4081 -2065 2225 114 7 3 chr2 66359513 66359819 -186896764 + AluSg SINE Alu 1 307 -3 3634 178 26 14 chr2 66359841 66360900 -186895683 + L1MC1 LINE L1 4899 5966 -367 2313 116 30 69 chr2 66360929 66361393 -186895190 + L1MC1 LINE L1 5888 6333 0 583 225 70 48 chr2 66361455 66361682 -186894901 + MLT2C1 LTR ERVL 1 232 -165 257 91 45 0 chr2 66361694 66361738 -186894845 + CT-rich Low_complexity Low_complexity 3 48 0 4548 56 3 2 chr2 66362102 66362669 -186893914 + L1PA5 LINE L1 5579 6146 -8 2788 89 5 0 chr2 66362691 66363074 -186893509 + L1PA6 LINE L1 5770 6154 0 3622 188 27 7 chr2 66363074 66363971 -186892612 + L1M2 LINE L1 2046 2958 -3890 336 95 32 32 chr2 66364528 66364591 -186891992 + AluJ/FLAM SINE Alu 1 63 -239 232 295 0 0 chr2 66364580 66364641 -186891942 + LTR16A1 LTR ERVL 277 337 -120 * 2227 76 10 0 chr2 66364783 66365087 -186891496 + AluY SINE Alu 1 307 -4 3488 155 37 9 chr2 66365089 66365767 -186890816 + L1MA4A LINE L1 5607 6303 0 1993 80 107 0 chr2 66365807 66366070 -186890513 - AluY SINE Alu -20 291 1 322 291 19 85 chr2 66366143 66366321 -186890262 - L2 LINE L2 -219 3053 2896 2201 155 59 7 chr2 66366321 66366728 -186889855 + MSTA LTR MaLR 1 428 0 322 291 19 85 chr2 66366728 66366807 -186889776 - L2 LINE L2 -376 2896 2813 311 282 39 77 chr2 66366842 66366998 -186889585 - L1MC4a LINE L1 -1635 6173 6024 269 135 19 0 chr2 66367117 66367169 -186889414 + (TA)n Simple_repeat Simple_repeat 1 53 0 368 99 53 33 chr2 66367278 66367430 -186889153 + (TA)n Simple_repeat Simple_repeat 1 155 0 2024 119 7 13 chr2 66367882 66368192 -186888391 + AluSg SINE Alu 1 308 -2 1086 218 44 57 chr2 66368317 66368684 -186887899 + MER31-int LTR ERV1 3346 3707 -1229 283 252 56 0 chr2 66368720 66368827 -186887756 + MIR SINE MIR 150 262 0 2475 109 25 5 chr2 66369687 66370055 -186886528 - THE1C LTR MaLR 0 375 1 21 0 0 0 chr2 66370543 66370564 -186886019 + AT_rich Low_complexity Low_complexity 1 21 0 341 153 14 0 chr2 66371241 66371313 -186885270 + GA-rich Low_complexity Low_complexity 1 73 0 22 0 0 0 chr2 66371784 66371806 -186884777 + AT_rich Low_complexity Low_complexity 1 22 0 249 311 47 47 chr2 66372091 66372239 -186884344 - MIR SINE MIR -8 254 107 202 207 276 23 chr2 66372642 66372729 -186883854 - MER5A DNA MER1_type -77 112 4 760 59 10 0 chr2 66372924 66373026 -186883557 - AluY SINE Alu -11 300 198 1313 215 11 8 chr2 66373126 66373391 -186883192 - AluJo SINE Alu -46 266 1 3286 168 29 13 chr2 66375938 66377113 -186879470 + L1M2 LINE L1 4618 5813 -478 924 126 31 13 chr2 66378587 66378786 -186877797 + AluSg/x SINE Alu 120 321 0 1711 134 4 25 chr2 66380240 66380516 -186876067 - AluSx SINE Alu -38 274 5 254 350 6 38 chr2 66382089 66382249 -186874334 - MIR3 SINE MIR 0 208 54 4959 104 4 4 chr2 66382277 66382960 -186873623 + LTR5 LTR ERVK 1 683 -286 6909 120 211 5 chr2 66383251 66384529 -186872054 - THE1A-int LTR MaLR -39 1541 1 238 111 0 0 chr2 66384529 66384565 -186872018 - THE1A LTR MaLR 0 355 320 364 238 10 10 chr2 66384834 66384935 -186871648 + MLT1K LTR MaLR 486 586 -2 266 87 0 22 chr2 66384950 66384996 -186871587 - MADE1 DNA Mariner -2 78 34 621 229 7 0 chr2 66385087 66385231 -186871352 + L1M2 LINE L1 4813 4957 -1189 582 114 0 0 chr2 66385233 66385312 -186871271 + AluSg SINE Alu 4 82 -228 2005 164 28 1 chr2 66385312 66385798 -186870785 + L1M2 LINE L1 4948 5451 -743 684 105 35 0 chr2 66385901 66386015 -186870568 - MLT1C LTR MaLR -349 118 1 3256 166 35 9 chr2 66387072 66388212 -186868371 - L1P5 LINE L1 -455 5699 4528 16159 45 2 1 chr2 66388361 66391134 -186865449 - L1PA5 LINE L1 -18 6136 3367 11967 172 48 33 chr2 66391332 66391886 -186864697 + L1MA4A LINE L1 2382 2926 -3220 1902 130 3 18 chr2 66391886 66392207 -186864376 + AluSx SINE Alu 1 317 0 11967 172 48 33 chr2 66392207 66392486 -186864097 + L1MA4A LINE L1 2926 3199 -2947 1905 129 16 52 chr2 66392486 66392796 -186863787 + AluSx SINE Alu 1 299 -13 11967 172 48 33 chr2 66392796 66393605 -186862978 + L1MA4A LINE L1 3199 3994 -2152 2341 82 7 0 chr2 66393605 66393898 -186862685 + AluSc SINE Alu 10 304 -5 11967 172 48 33 chr2 66393898 66395210 -186861373 + L1MA4A LINE L1 3994 5386 -760 4590 135 39 12 chr2 66395215 66395384 -186861199 + L1MA4A LINE L1 5431 5594 -709 2134 133 0 3 chr2 66395384 66395693 -186860890 + AluSx SINE Alu 1 308 -4 4590 135 39 12 chr2 66395693 66396373 -186860210 + L1MA4A LINE L1 5594 6303 0 1993 80 107 0 chr2 66396413 66396676 -186859907 - AluY SINE Alu -20 291 1 332 304 19 82 chr2 66396749 66396926 -186859657 - L2 LINE L2 -219 3053 2895 2406 144 51 7 chr2 66396926 66397336 -186859247 + MSTA LTR MaLR 1 428 0 332 304 19 82 chr2 66397336 66397415 -186859168 - L2 LINE L2 -377 2895 2813 1220 329 112 47 chr2 66397622 66397664 -186858919 - L2 LINE L2 -569 2745 2707 4692 58 2 2 chr2 66397664 66398280 -186858303 + L1PA5 LINE L1 5556 6171 0 1220 329 112 47 chr2 66398280 66399254 -186857329 - L2 LINE L2 -607 2707 1662 4648 168 14 41 chr2 66399255 66400816 -186855767 + L1MB2 LINE L1 4654 6170 -1 284 0 28 0 chr2 66400876 66400912 -186855671 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 762 271 75 14 chr2 66400925 66401139 -186855444 - MIR SINE MIR -32 230 4 2326 202 52 18 chr2 66401208 66401767 -186854816 - MER119 DNA MER1_type 0 583 6 22 0 0 0 chr2 66402349 66402371 -186854212 + AT_rich Low_complexity Low_complexity 1 22 0 2047 113 28 0 chr2 66402956 66403247 -186853336 + AluSx SINE Alu 9 307 -5 2304 106 3 0 chr2 66403248 66403551 -186853032 + AluSg SINE Alu 2 305 -5 1056 284 82 3 chr2 66403755 66404086 -186852497 + LTR16B LTR ERVL 107 463 -1 296 309 45 34 chr2 66404104 66404282 -186852301 - HAL1 LINE L1 -4 2503 2324 263 337 48 11 chr2 66404283 66404470 -186852113 - MLT1J LTR MaLR 0 511 318 657 206 136 58 chr2 66404493 66404750 -186851833 + L2 LINE L2 1565 1841 -1473 * 5786 108 8 6 chr2 66404746 66405607 -186850976 + L1PA13 LINE L1 5290 6152 -11 3486 249 81 21 chr2 66405622 66407015 -186849568 + L2 LINE L2 1843 3313 0 2315 247 116 74 chr2 66407368 66407687 -186848896 - HAL1 LINE L1 -543 1964 1660 561 26 52 0 chr2 66407687 66407764 -186848819 - L1PA3 LINE L1 0 6155 6075 2315 247 116 74 chr2 66407764 66408327 -186848256 - HAL1 LINE L1 -847 1660 1122 1863 118 104 0 chr2 66408327 66408606 -186847977 - AluSx SINE Alu -4 308 1 2315 247 116 74 chr2 66408606 66409174 -186847409 - HAL1 LINE L1 -1385 1122 452 423 323 61 52 chr2 66409190 66409552 -186847031 - HAL1 LINE L1 -2140 367 3 561 214 105 124 chr2 66409633 66409890 -186846693 + MIR SINE MIR 1 252 -10 315 319 70 25 chr2 66410193 66410350 -186846233 - L1MC/D LINE L1 -2231 5577 5414 286 215 129 72 chr2 66410567 66410776 -186845807 + L1ME4a LINE L1 5901 6121 0 2859 164 44 21 chr2 66413258 66413830 -186842753 + L1PB1 LINE L1 1 585 -6278 * 13145 160 15 27 chr2 66413827 66417712 -186838871 + L1PB1 LINE L1 3095 6932 0 930 128 180 0 chr2 66419706 66419878 -186836705 + MER3 DNA MER1_type 7 209 0 204 195 26 39 chr2 66421108 66421185 -186835398 + (TAAA)n Simple_repeat Simple_repeat 1 76 0 22 70 0 0 chr2 66421412 66421455 -186835128 + AT_rich Low_complexity Low_complexity 1 43 0 213 261 15 15 chr2 66421527 66421592 -186834991 + (TATATG)n Simple_repeat Simple_repeat 2 66 0 435 259 42 7 chr2 66424289 66424432 -186832151 + L1ME3A LINE L1 6016 6163 -7 2296 204 64 19 chr2 66424948 66425530 -186831053 + L1MC4 LINE L1 6470 7077 -965 21 0 0 0 chr2 66425535 66425556 -186831027 + AT_rich Low_complexity Low_complexity 1 21 0 1715 210 152 31 chr2 66425558 66426143 -186830440 + L1MC4 LINE L1 7248 7903 -139 223 353 107 8 chr2 66426229 66426351 -186830232 - L2 LINE L2 -194 3078 2945 1135 284 184 41 chr2 66426772 66427790 -186828793 - HAL1 LINE L1 -1341 1166 4 549 209 0 0 chr2 66428243 66428348 -186828235 - AluJb SINE Alu -6 306 202 435 177 0 0 chr2 66430011 66430107 -186826476 + (ATG)n Simple_repeat Simple_repeat 2 97 0 709 247 147 0 chr2 66430127 66430317 -186826266 - MIR SINE MIR -44 218 1 2685 26 0 0 chr2 66430383 66430685 -186825898 + AluY SINE Alu 1 302 -9 262 283 100 25 chr2 66431019 66431139 -186825444 + MARNA DNA Mariner 72 200 -386 410 269 99 0 chr2 66431317 66431458 -186825125 + MIR SINE MIR 30 184 -78 22 0 0 0 chr2 66431537 66431559 -186825024 + AT_rich Low_complexity Low_complexity 1 22 0 2301 114 0 0 chr2 66432574 66432880 -186823703 + AluSx SINE Alu 1 306 -6 185 286 219 25 chr2 66435968 66436087 -186820496 - L2 LINE L2 -998 2316 2175 258 56 0 0 chr2 66436191 66436227 -186820356 + (TG)n Simple_repeat Simple_repeat 2 37 0 391 209 177 38 chr2 66436378 66436536 -186820047 + MIR SINE MIR 37 216 -46 1675 191 0 7 chr2 66437026 66437324 -186819259 + AluJo SINE Alu 1 296 -16 2038 144 3 0 chr2 66437355 66437660 -186818923 - AluSq SINE Alu -7 306 1 268 284 117 18 chr2 66437884 66438106 -186818477 - L1ME4a LINE L1 -183 5938 5695 802 252 63 21 chr2 66438121 66438441 -186818142 - L1ME4a LINE L1 -575 5599 5270 249 200 0 46 chr2 66440001 66440066 -186816517 - MIR SINE MIR -48 214 153 396 0 0 0 chr2 66440069 66440113 -186816470 + (TG)n Simple_repeat Simple_repeat 1 44 0 380 338 7 26 chr2 66440217 66440371 -186816212 - MIR3 SINE MIR -55 153 3 276 282 40 73 chr2 66441517 66441641 -186814942 - L2 LINE L2 -8 3264 3145 851 303 84 24 chr2 66442115 66442617 -186813966 + HAL1 LINE L1 12 543 -1964 * 2128 218 71 30 chr2 66442616 66443321 -186813262 + HAL1 LINE L1 1054 1787 -720 * 28103 107 6 6 chr2 66443294 66446436 -186810147 + L1PA7 LINE L1 1111 4247 -1907 1821 156 3 13 chr2 66446436 66446743 -186809840 + AluY SINE Alu 1 304 -7 28103 107 6 6 chr2 66446743 66448639 -186807944 + L1PA7 LINE L1 4247 6141 -13 1081 253 76 51 chr2 66448657 66449131 -186807452 + HAL1 LINE L1 1748 2233 -274 3127 144 150 8 chr2 66449146 66449765 -186806818 + MER39 LTR ERV1 1 707 0 780 226 75 9 chr2 66449765 66449991 -186806592 + HAL1 LINE L1 2245 2485 -22 31 0 0 0 chr2 66450888 66450919 -186805664 + AT_rich Low_complexity Low_complexity 1 31 0 239 200 154 123 chr2 66451418 66451486 -186805097 - MIR SINE MIR -13 249 185 2332 102 0 0 chr2 66451486 66451781 -186804802 + AluSx SINE Alu 2 296 -16 239 200 154 123 chr2 66451781 66451842 -186804741 - MIR SINE MIR -77 185 116 1109 127 75 4 chr2 66451929 66452157 -186804426 - L1MA4 LINE L1 -8 6292 6049 925 211 116 28 chr2 66452262 66452513 -186804070 + MLT1F LTR MaLR 202 474 -68 307 309 81 40 chr2 66452736 66452959 -186803624 + L2 LINE L2 2444 2675 -639 31 44 0 0 chr2 66452987 66453032 -186803551 + AT_rich Low_complexity Low_complexity 1 45 0 2061 126 10 7 chr2 66453624 66453933 -186802650 - AluSx SINE Alu -2 310 1 15838 210 39 21 chr2 66454014 66456355 -186800228 + L1PA15 LINE L1 93 2391 -4406 1967 144 3 20 chr2 66456355 66456660 -186799923 + AluJb SINE Alu 3 302 -10 15838 210 39 21 chr2 66456660 66457777 -186798806 + L1PA15 LINE L1 2391 3487 -3310 1734 59 51 8 chr2 66457777 66458013 -186798570 - L1PA7 LINE L1 0 6154 5909 15838 210 39 21 chr2 66458013 66458183 -186798400 + L1PA15 LINE L1 3487 3652 -3145 399 92 0 0 chr2 66458183 66458248 -186798335 + (CA)n Simple_repeat Simple_repeat 2 66 0 15838 210 39 21 chr2 66458248 66459373 -186797210 + L1PA15 LINE L1 3652 4755 -2042 2186 123 3 0 chr2 66459373 66459674 -186796909 + AluSp SINE Alu 1 302 -11 15838 210 39 21 chr2 66459674 66460580 -186796003 + L1PA15 LINE L1 4755 5876 -921 3957 107 3 2 chr2 66460580 66461160 -186795423 + L1PA15 LINE L1 6236 6816 0 225 302 31 0 chr2 66461303 66461399 -186795184 - HAL1 LINE L1 -1599 908 810 225 0 0 0 chr2 66461798 66461823 -186794760 + (TG)n Simple_repeat Simple_repeat 2 26 0 635 345 83 18 chr2 66462271 66462668 -186793915 + L2 LINE L2 2825 3247 -66 1077 255 89 50 chr2 66462827 66462965 -186793618 + LTR40b LTR ERVL 1 132 -330 18968 53 10 1 chr2 66462965 66466181 -186790402 - L1PA5 LINE L1 -2 6152 2914 1077 255 89 50 chr2 66466181 66466458 -186790125 + LTR40b LTR ERVL 132 432 -30 37398 79 5 6 chr2 66466469 66472361 -186784222 + L1PA6 LINE L1 11 5898 -256 21 0 0 0 chr2 66472651 66472672 -186783911 + AT_rich Low_complexity Low_complexity 1 21 0 231 299 8 17 chr2 66472747 66472864 -186783719 - LTR67 LTR ERVL -16 541 426 2422 88 3 0 chr2 66473197 66473502 -186783081 + AluSx SINE Alu 1 306 -6 1571 179 34 17 chr2 66473740 66474036 -186782547 + AluJo SINE Alu 1 301 -11 7151 65 148 2 chr2 66474084 66475150 -186781433 + MER11B LTR ERVK 1 1222 -14 2138 121 3 3 chr2 66475837 66476134 -186780449 - AluSg SINE Alu -13 297 1 231 268 214 33 chr2 66476873 66477149 -186779434 + L2 LINE L2 2434 2759 -555 416 167 89 0 chr2 66477211 66477301 -186779282 + MER4A LTR ERV1 1 98 -566 * 1673 136 5 68 chr2 66477296 66477670 -186778913 + MER4A LTR ERV1 256 664 0 * 2881 208 40 67 chr2 66477670 66478483 -186778100 - MER21B LTR ERV1 -61 802 12 873 311 123 23 chr2 66478501 66478941 -186777642 + L2 LINE L2 2828 3311 -2 241 304 113 9 chr2 66479004 66479119 -186777464 + L3b LINE CR1 1216 1342 -241 * 566 254 212 11 chr2 66479103 66479292 -186777291 - MIR SINE MIR 0 262 36 236 342 49 43 chr2 66479308 66479492 -186777091 + L3b LINE CR1 1317 1501 -82 4888 48 3 0 chr2 66479503 66480092 -186776491 - LTR10C LTR ERV1 0 591 1 233 158 35 0 chr2 66480106 66480163 -186776420 + L1ME3A LINE L1 5718 5776 -386 320 209 182 36 chr2 66480179 66480289 -186776294 + L1ME3A LINE L1 5841 5966 -204 529 265 0 61 chr2 66481863 66481959 -186774624 + MIR SINE MIR 4 90 -172 2198 104 3 23 chr2 66481959 66482267 -186774316 - AluY SINE Alu -9 302 1 529 265 0 61 chr2 66482267 66482317 -186774266 + MIR SINE MIR 90 141 -121 766 214 140 0 chr2 66482331 66482560 -186774023 - L1MEc LINE L1 -4478 1918 1658 733 226 11 23 chr2 66482556 66482733 -186773850 - L1MEc LINE L1 -5888 317 143 * 294 121 0 99 chr2 66483047 66483229 -186773354 + (TA)n Simple_repeat Simple_repeat 1 164 0 3905 196 37 18 chr2 66483689 66484527 -186772056 - MER21B LTR ERV1 -9 854 1 21 0 0 0 chr2 66485477 66485498 -186771085 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr2 66485908 66485934 -186770649 + AT_rich Low_complexity Low_complexity 1 26 0 2172 145 0 0 chr2 66486984 66487294 -186769289 + AluSx SINE Alu 1 310 -2 301 171 0 26 chr2 66487381 66487457 -186769126 + (TAGA)n Simple_repeat Simple_repeat 1 74 0 1406 194 83 21 chr2 66487458 66487822 -186768761 + MSTD LTR MaLR 1 383 -7 3025 216 78 12 chr2 66487832 66488722 -186767861 + L1MC4 LINE L1 7094 8041 -1 4672 258 78 18 chr2 66488870 66489381 -186767202 + L1MEc LINE L1 245 724 -5672 1700 163 48 7 chr2 66489381 66489670 -186766913 + AluJb SINE Alu 1 301 -11 4672 258 78 18 chr2 66489670 66491041 -186765542 + L1MEc LINE L1 724 2239 -4157 2254 100 7 0 chr2 66491059 66491358 -186765225 + AluSc SINE Alu 1 301 -8 878 167 7 177 chr2 66491500 66491805 -186764778 + AluJo SINE Alu 21 273 -39 183 80 0 0 chr2 66491813 66491838 -186764745 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 330 209 19 164 chr2 66492013 66492324 -186764259 - L1ME3A LINE L1 -225 5945 5680 274 326 79 0 chr2 66492390 66492479 -186764104 - MIR SINE MIR -108 154 59 1788 174 33 10 chr2 66493487 66493786 -186762797 - AluJo SINE Alu -6 306 1 891 60 0 17 chr2 66494540 66494657 -186761926 - L1PA5 LINE L1 -9 6145 6031 483 267 150 42 chr2 66494820 66495060 -186761523 - L2 LINE L2 -1057 2257 1992 195 250 0 42 chr2 66497874 66497922 -186758661 - L3 LINE CR1 -15 1562 1517 266 211 0 0 chr2 66498050 66498107 -186758476 - MER31A LTR ERV1 -76 409 353 202 343 176 0 chr2 66498226 66498328 -186758255 - MIR3 SINE MIR -7 201 82 998 233 58 17 chr2 66499468 66499708 -186756875 - MIR SINE MIR -11 251 2 299 253 25 13 chr2 66499765 66499844 -186756739 + L2 LINE L2 3193 3272 0 1642 176 17 14 chr2 66500012 66500302 -186756281 - AluJb SINE Alu -21 291 1 28 29 0 0 chr2 66500311 66500346 -186756237 + AT_rich Low_complexity Low_complexity 1 35 0 500 280 23 8 chr2 66500416 66500548 -186756035 - L2 LINE L2 -4 3309 3176 2179 114 23 0 chr2 66500740 66501046 -186755537 - AluSp SINE Alu 0 313 1 29 28 0 0 chr2 66503797 66503833 -186752750 + AT_rich Low_complexity Low_complexity 1 36 0 308 259 355 5 chr2 66504459 66504648 -186751935 + MIR SINE MIR 8 262 0 2427 85 0 13 chr2 66505913 66506229 -186750354 - AluSx SINE Alu 0 312 1 298 157 0 43 chr2 66506714 66506784 -186749799 + L1MD3 LINE L1 7911 7977 -18 22 35 0 0 chr2 66507218 66507247 -186749336 + AT_rich Low_complexity Low_complexity 1 29 0 201 209 15 15 chr2 66507524 66507591 -186748992 + T-rich Low_complexity Low_complexity 1 67 0 521 280 122 16 chr2 66508030 66508227 -186748356 - MIR SINE MIR -11 251 30 538 200 213 6 chr2 66508267 66508427 -186748156 + MIR SINE MIR 70 262 0 1471 215 86 65 chr2 66510172 66510734 -186745849 - L1MD2 LINE L1 -15 6344 5766 2238 86 7 3 chr2 66510734 66511026 -186745557 - AluSc SINE Alu -15 294 2 1471 215 86 65 chr2 66511026 66511078 -186745505 - L1MD2 LINE L1 -593 5766 5717 2324 95 10 0 chr2 66511423 66511728 -186744855 - AluSx SINE Alu -4 308 1 235 282 59 24 chr2 66511895 66511980 -186744603 + MIR3 SINE MIR 108 195 -13 497 299 72 19 chr2 66513229 66513436 -186743147 + MIR SINE MIR 20 237 -25 262 232 48 104 chr2 66513451 66513576 -186743007 + MIR SINE MIR 112 229 -33 1632 178 28 0 chr2 66513869 66514156 -186742427 + AluJo SINE Alu 1 295 -17 1909 127 10 3 chr2 66515024 66515315 -186741268 + AluSx SINE Alu 1 293 -19 2442 55 10 0 chr2 66515318 66515625 -186740958 + AluY SINE Alu 1 310 -1 1435 181 0 26 chr2 66516331 66516596 -186739987 + AluJo SINE Alu 36 293 -19 475 191 105 129 chr2 66516732 66516854 -186739729 + LTR50 LTR ERVL 1 117 -678 2212 104 27 0 chr2 66516854 66517151 -186739432 + AluSx SINE Alu 1 305 -7 475 191 105 129 chr2 66517151 66517238 -186739345 + LTR50 LTR ERVL 117 205 -590 1674 164 71 11 chr2 66517377 66517658 -186738925 + AluJb SINE Alu 1 298 -14 784 232 21 74 chr2 66518518 66518582 -186738001 - L1MC4a LINE L1 -1907 5901 5835 1637 181 3 17 chr2 66518582 66518875 -186737708 + AluJo SINE Alu 2 290 -22 784 232 21 74 chr2 66518875 66519094 -186737489 - L1MC4a LINE L1 -1973 5835 5633 250 260 31 52 chr2 66519706 66519802 -186736781 + L2 LINE L2 2531 2624 -690 441 300 163 0 chr2 66519928 66520088 -186736495 + MIR SINE MIR 25 210 -52 881 244 110 36 chr2 66520118 66520665 -186735918 + MER34B LTR ERV1 1 538 -4 228 182 0 0 chr2 66520670 66520714 -186735869 + T-rich Low_complexity Low_complexity 1 44 0 319 384 28 6 chr2 66520728 66520905 -186735678 + L2 LINE L2 2795 2975 -339 396 254 40 57 chr2 66520989 66521166 -186735417 - LTR16A1 LTR ERVL 0 457 284 3447 148 112 15 chr2 66521442 66522158 -186734425 + LTR48 LTR ERV1 1 785 -2 1678 165 62 14 chr2 66522233 66522802 -186733781 + MER39 LTR ERV1 1 647 -60 2102 198 136 65 chr2 66522808 66523530 -186733053 + LTR19C LTR ERV1 7 779 0 314 324 79 79 chr2 66523933 66524211 -186732372 - L2 LINE L2 -188 3084 2807 287 181 84 24 chr2 66525139 66525222 -186731361 - MER34 LTR ERV1 -5 537 450 674 213 140 73 chr2 66525337 66525652 -186730931 - MER34C LTR ERV1 -220 365 30 2341 93 7 0 chr2 66526458 66526758 -186729825 - AluSp SINE Alu -11 302 1 12234 102 8 23 chr2 66527491 66529647 -186726936 + L1PA7 LINE L1 2 2155 -4306 1325 37 0 0 chr2 66529647 66529808 -186726775 - L1PA2 LINE L1 -2 6153 5993 216 97 0 0 chr2 66529821 66529852 -186726731 + (T)n Simple_repeat Simple_repeat 1 31 0 23086 93 13 5 chr2 66530799 66534569 -186722014 + L1PA7 LINE L1 2147 5932 -537 1277 92 16 5 chr2 66534569 66534753 -186721830 + L1PA7 LINE L1 6284 6469 0 1756 208 126 84 chr2 66535153 66535946 -186720637 + LTR1B LTR ERV1 1 826 0 23 33 0 0 chr2 66536145 66536175 -186720408 + AT_rich Low_complexity Low_complexity 1 30 0 4233 203 72 21 chr2 66536755 66537855 -186718728 + L1MDa LINE L1 18 1258 -5282 2723 201 112 15 chr2 66537842 66538779 -186717804 + L1MDa LINE L1 2315 3397 -3143 * 1936 125 7 14 chr2 66538779 66539066 -186717517 + AluSx SINE Alu 14 298 -14 2723 201 112 15 chr2 66539066 66539265 -186717318 + L1MDa LINE L1 3397 3575 -2965 373 340 20 20 chr2 66539268 66539418 -186717165 + L1MA9 LINE L1 1356 1505 -5991 7790 222 51 26 chr2 66539811 66541547 -186715036 + L1MA9 LINE L1 2072 3764 -3801 1945 145 21 0 chr2 66541547 66541830 -186714753 + AluSx SINE Alu 1 289 -23 7790 222 51 26 chr2 66541830 66544204 -186712379 + L1MA9 LINE L1 3764 6146 -1419 1090 184 9 40 chr2 66544204 66544432 -186712151 - AluJo SINE Alu -19 293 73 1478 218 30 10 chr2 66544432 66544835 -186711748 + L1MA9 LINE L1 6147 6557 -1008 232 217 0 0 chr2 66545005 66545065 -186711518 + L1MA9 LINE L1 6498 6557 -1008 2284 113 0 3 chr2 66545072 66545382 -186711201 + AluSg1 SINE Alu 1 309 0 2322 178 60 13 chr2 66545432 66545561 -186711022 + L1MA9 LINE L1 6576 6698 -1033 180 77 0 0 chr2 66545561 66545587 -186710996 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 2322 178 60 13 chr2 66545587 66546103 -186710480 + L1MA9 LINE L1 6698 7261 -470 1579 146 44 58 chr2 66546104 66546327 -186710256 + L1MA9 LINE L1 7367 7585 -146 195 42 0 0 chr2 66546327 66546351 -186710232 + (CA)n Simple_repeat Simple_repeat 1 24 0 1579 146 44 58 chr2 66546351 66546490 -186710093 + L1MA9 LINE L1 7585 7724 -7 1819 200 3 0 chr2 66546509 66546819 -186709764 + AluJo SINE Alu 1 311 -1 690 286 40 7 chr2 66546825 66547129 -186709454 + L1M4 LINE L1 3192 3505 -2641 649 103 11 0 chr2 66547156 66547243 -186709340 + AluSg/x SINE Alu 201 288 -24 1089 196 5 20 chr2 66547243 66547447 -186709136 - AluJo SINE Alu -111 201 1 475 199 60 7 chr2 66547448 66547674 -186708909 - MSTC LTR MaLR -59 315 1 1452 176 19 37 chr2 66547674 66547998 -186708585 + L1MD1 LINE L1 5356 5673 -569 2263 54 11 0 chr2 66548001 66548308 -186708275 - AluY SINE Alu 0 310 1 888 212 11 0 chr2 66548340 66548519 -186708064 + AluJb SINE Alu 129 309 -3 653 205 7 26 chr2 66548520 66548671 -186707912 + L1MD1 LINE L1 5684 5831 -411 7616 130 23 22 chr2 66548679 66551203 -186705380 - L1MA2 LINE L1 -5 7718 5195 7075 160 20 14 chr2 66552069 66552244 -186704339 - L1MA2 LINE L1 -2355 5210 5038 2466 74 3 0 chr2 66552244 66552542 -186704041 - AluSg SINE Alu -11 299 1 7075 160 20 14 chr2 66552542 66555131 -186701452 - L1MA2 LINE L1 -2527 5038 2427 2168 116 7 0 chr2 66555131 66555433 -186701150 - AluSg SINE Alu -6 304 1 7075 160 20 14 chr2 66555433 66555456 -186701127 - L1MA2 LINE L1 -5138 2427 2406 2055 140 60 25 chr2 66555456 66555855 -186700728 + L1MD1 LINE L1 5830 6242 0 351 324 65 9 chr2 66555860 66555968 -186700615 + MER5A DNA MER1_type 70 183 -6 397 317 115 5 chr2 66555974 66556182 -186700401 - L3 LINE CR1 -44 1533 1303 388 219 31 21 chr2 66556270 66556366 -186700217 + MER81 DNA DNA 18 114 0 1309 190 69 17 chr2 66556379 66556726 -186699857 - L1ME1 LINE L1 -1 6165 5801 434 347 117 22 chr2 66556726 66557000 -186699583 - L3 LINE CR1 -459 1118 819 2340 158 49 61 chr2 66557030 66557637 -186698946 - L1MB7 LINE L1 -19 6165 5566 1023 149 21 46 chr2 66558181 66558375 -186698208 - MER5A DNA MER1_type 0 189 1 274 219 96 68 chr2 66559080 66559226 -186697357 + MLT1J LTR MaLR 324 473 -38 262 247 0 103 chr2 66559353 66559402 -186697181 - L2 LINE L2 -188 3084 3048 2001 133 19 91 chr2 66559402 66559829 -186696754 - MLT2C1 LTR ERVL -1 396 1 262 247 0 103 chr2 66559829 66559876 -186696707 - L2 LINE L2 -224 3048 2998 1749 282 69 52 chr2 66560942 66561626 -186694957 + L1MEc LINE L1 102 812 -5584 2129 131 3 0 chr2 66561626 66561923 -186694660 + AluSx SINE Alu 1 298 -14 1749 282 69 52 chr2 66561923 66562291 -186694292 + L1MEc LINE L1 812 1172 -5224 1360 205 115 13 chr2 66562604 66562916 -186693667 + MER2 DNA MER2_type 1 344 0 385 345 3 1 chr2 66562995 66563152 -186693431 - MLT1I LTR MaLR -210 199 69 239 170 0 19 chr2 66563380 66563433 -186693150 + (TA)n Simple_repeat Simple_repeat 2 53 0 327 250 54 33 chr2 66563449 66563541 -186693042 - L1MC4a LINE L1 -1904 5904 5811 777 242 32 28 chr2 66563613 66563898 -186692685 - L1MC4a LINE L1 -1770 6038 5753 238 304 25 0 chr2 66563901 66563980 -186692603 - L1MC4a LINE L1 -2103 5705 5625 1092 279 90 36 chr2 66564643 66565204 -186691379 - L2 LINE L2 -10 3303 2683 2380 53 0 16 chr2 66565204 66565507 -186691076 - AluY SINE Alu -13 298 1 1092 279 90 36 chr2 66565507 66565668 -186690915 - L2 LINE L2 -630 2683 2532 1165 214 147 50 chr2 66567289 66567746 -186688837 + MLT1D LTR MaLR 5 505 0 26 30 0 0 chr2 66568168 66568201 -186688382 + AT_rich Low_complexity Low_complexity 1 33 0 313 117 0 17 chr2 66568584 66568644 -186687939 + L1PA16 LINE L1 6108 6166 0 1154 237 31 24 chr2 66569057 66569344 -186687239 - MLT1E LTR MaLR 0 593 305 399 345 56 14 chr2 66569385 66569527 -186687056 + L2 LINE L2 3123 3270 -2 497 310 7 0 chr2 66570014 66570156 -186686427 - MIR3 SINE MIR 0 208 66 619 246 58 6 chr2 66570175 66570346 -186686237 + MIR SINE MIR 20 199 -63 201 289 0 0 chr2 66570368 66570420 -186686163 + (TA)n Simple_repeat Simple_repeat 1 52 0 230 170 19 19 chr2 66570420 66570473 -186686110 - LTR40a LTR ERVL -78 441 389 252 0 0 0 chr2 66570638 66570666 -186685917 + (GA)n Simple_repeat Simple_repeat 2 29 0 283 245 98 70 chr2 66570747 66570890 -186685693 - LTR40a LTR ERVL -372 147 1 208 355 0 13 chr2 66572111 66572187 -186684396 - L2 LINE L2 -1039 2275 2201 634 273 12 0 chr2 66572199 66572364 -186684219 - LTR67 LTR ERVL -8 549 383 406 263 244 24 chr2 66572738 66572951 -186683632 - MIR SINE MIR -1 261 2 419 330 30 55 chr2 66572996 66573127 -186683456 - L2 LINE L2 -1206 2108 1975 2697 144 10 53 chr2 66573127 66573613 -186682970 - MLT1C LTR MaLR -2 465 1 419 330 30 55 chr2 66573613 66573845 -186682738 - L2 LINE L2 -1339 1975 1754 434 228 96 7 chr2 66575033 66575169 -186681414 + L1MA10 LINE L1 6185 6332 -2 2174 117 0 0 chr2 66577346 66577657 -186678926 - AluSx SINE Alu 0 311 1 454 192 67 10 chr2 66577779 66577883 -186678700 - MER91C DNA MER1_type -30 110 1 * 628 214 71 7 chr2 66577883 66578026 -186678557 + MIR SINE MIR 45 197 -65 1124 276 41 3 chr2 66579162 66579553 -186677030 + LTR16B LTR ERVL 8 413 -51 1287 115 0 0 chr2 66579554 66579728 -186676855 - AluSg/x SINE Alu -21 291 118 311 71 0 36 chr2 66580553 66580609 -186675974 - L1MB3 LINE L1 -2 6181 6128 422 176 0 0 chr2 66580612 66580710 -186675873 - AluJ/FRAM SINE Alu 0 315 218 477 0 0 0 chr2 66580710 66580763 -186675820 + (TTTTA)n Simple_repeat Simple_repeat 2 54 0 1573 157 31 42 chr2 66580763 66581050 -186675533 - AluJo SINE Alu -28 284 1 1116 233 46 28 chr2 66581243 66581569 -186675014 - LTR16B LTR ERVL -14 450 119 1860 130 15 18 chr2 66582400 66582730 -186673853 + L1MB1 LINE L1 5849 6177 -12 230 258 15 30 chr2 66584452 66584518 -186672065 + MER5B DNA MER1_type 1 65 -113 1354 215 77 57 chr2 66584530 66585024 -186671559 + L1MD2 LINE L1 5854 6357 -2 515 246 18 9 chr2 66585047 66585157 -186671426 + MER5B DNA MER1_type 68 178 0 513 300 123 17 chr2 66585467 66585874 -186670709 + L1MEc LINE L1 1366 1815 -4581 25 0 0 0 chr2 66585889 66585914 -186670669 + AT_rich Low_complexity Low_complexity 1 25 0 537 268 80 72 chr2 66586015 66586415 -186670168 - MLT1J LTR MaLR 0 511 109 15596 141 36 13 chr2 66588105 66590789 -186665794 + L1M1 LINE L1 19 2763 -4802 3553 175 10 58 chr2 66590775 66591568 -186665015 + L1M1 LINE L1 3077 3783 -3782 * 2213 112 7 0 chr2 66591568 66591863 -186664720 + AluSg SINE Alu 1 297 -13 3553 175 10 58 chr2 66591863 66592256 -186664327 + L1M1 LINE L1 3783 4193 -3372 9542 182 30 20 chr2 66592745 66594970 -186661613 + L1M1 LINE L1 4179 6426 -1139 307 133 0 0 chr2 66594974 66595019 -186661564 + MER30 DNA MER1_type 1 45 -185 239 313 60 0 chr2 66595130 66595213 -186661370 + L2 LINE L2 3175 3262 -10 2224 111 10 3 chr2 66595217 66595515 -186661068 + AluSx SINE Alu 3 302 -10 2325 99 0 0 chr2 66596198 66596502 -186660081 + AluSc SINE Alu 1 304 -5 712 139 12 58 chr2 66596560 66596732 -186659851 - L1MB5 LINE L1 0 6174 6011 29 0 0 0 chr2 66596823 66596852 -186659731 + AT_rich Low_complexity Low_complexity 1 29 0 182 299 45 15 chr2 66596855 66596922 -186659661 - L2 LINE L2 -8 3264 3196 1936 94 38 0 chr2 66598290 66598557 -186658026 - AluSx SINE Alu -32 280 4 730 196 0 0 chr2 66598558 66598716 -186657867 - L1MB4 LINE L1 -355 5825 5668 2632 35 0 10 chr2 66598718 66599028 -186657555 - AluYb8 SINE Alu -11 307 1 2207 154 34 0 chr2 66599276 66599685 -186656898 - L1MB7 LINE L1 -19 6165 5743 236 194 30 15 chr2 66599867 66599934 -186656649 + (TA)n Simple_repeat Simple_repeat 1 68 0 25 0 0 0 chr2 66600014 66600039 -186656544 + AT_rich Low_complexity Low_complexity 1 25 0 443 100 14 0 chr2 66600385 66600455 -186656128 + (CAGA)n Simple_repeat Simple_repeat 2 72 0 233 335 82 92 chr2 66600553 66601260 -186655323 - L2 LINE L2 0 3272 2569 236 242 22 77 chr2 66601579 66601670 -186654913 - MIR3 SINE MIR -49 159 74 192 167 0 0 chr2 66602965 66603001 -186653582 + L2 LINE L2 3278 3313 0 741 179 58 63 chr2 66603450 66603640 -186652943 - MER5A DNA MER1_type 0 189 1 1317 191 30 3 chr2 66604248 66604551 -186652032 - L1ME3A LINE L1 0 6170 5860 3570 101 21 8 chr2 66604559 66605094 -186651489 - L1PA14 LINE L1 -3 6158 5617 340 154 0 0 chr2 66605195 66605247 -186651336 + MER30 DNA MER1_type 179 230 0 6537 111 22 18 chr2 66605247 66606197 -186650386 + L1MA2 LINE L1 5006 5965 -339 2431 58 0 3 chr2 66606197 66606492 -186650091 + AluY SINE Alu 1 294 -17 6537 111 22 18 chr2 66606492 66606834 -186649749 + L1MA2 LINE L1 5965 6304 0 1415 161 129 38 chr2 66606842 66607183 -186649400 + MSTD LTR MaLR 25 396 0 276 333 0 0 chr2 66608335 66608416 -186648167 - MIR SINE MIR -106 156 76 1673 164 50 7 chr2 66608524 66608822 -186647761 + AluJo SINE Alu 1 311 -1 313 289 74 16 chr2 66609170 66609291 -186647292 + L1MC4a LINE L1 6672 6799 -1009 2264 124 0 0 chr2 66609404 66609711 -186646872 + AluSq SINE Alu 1 307 -6 360 0 0 0 chr2 66609925 66609965 -186646618 + (TG)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr2 66610018 66610039 -186646544 + AT_rich Low_complexity Low_complexity 1 21 0 982 204 71 30 chr2 66610958 66611200 -186645383 - MIR SINE MIR -6 256 7 432 0 0 0 chr2 66611491 66611539 -186645044 + (TAGA)n Simple_repeat Simple_repeat 1 48 0 204 150 0 25 chr2 66613027 66613067 -186643516 + (CAAAAA)n Simple_repeat Simple_repeat 1 39 0 37489 41 3 4 chr2 66613439 66615293 -186641290 + L1P LINE L1 1 1855 -4291 2874 16 0 0 chr2 66615293 66615607 -186640976 + AluYb8 SINE Alu 1 314 -4 37489 41 3 4 chr2 66615607 66618577 -186638006 + L1P LINE L1 1855 4821 -1325 1155 123 14 57 chr2 66618586 66618608 -186637975 + AluY SINE Alu 94 115 -196 315 0 0 0 chr2 66618608 66618643 -186637940 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 7129 30 2 0 chr2 66618643 66619486 -186637097 + L1PA4 LINE L1 5311 6155 0 1155 123 14 57 chr2 66619486 66619673 -186636910 + AluY SINE Alu 113 295 -16 5404 149 35 12 chr2 66619779 66619883 -186636700 - L1MA4 LINE L1 -6 6294 6194 2466 68 0 0 chr2 66619883 66620178 -186636405 + AluSq SINE Alu 1 295 -18 5404 149 35 12 chr2 66620178 66621563 -186635020 - L1MA4 LINE L1 -106 6194 4766 1894 162 13 3 chr2 66621896 66622205 -186634378 - AluJb SINE Alu 0 312 1 371 160 32 64 chr2 66622362 66622456 -186634127 + MER104 DNA Tc2 1 91 -89 203 206 44 59 chr2 66623661 66623729 -186632854 + MIR3 SINE MIR 128 194 -14 466 271 53 53 chr2 66623963 66623986 -186632597 - L1ME4a LINE L1 -1 6120 6098 1989 90 4 26 chr2 66623986 66624253 -186632330 + AluSx SINE Alu 33 293 -19 1994 149 0 7 chr2 66624259 66624554 -186632029 + AluJb SINE Alu 1 293 -19 466 271 53 53 chr2 66624554 66624804 -186631779 - L1ME4a LINE L1 -27 6094 5840 734 235 78 42 chr2 66624811 66625028 -186631555 + MIR SINE MIR 17 241 -21 309 125 0 0 chr2 66625041 66625097 -186631486 + (CTA)n Simple_repeat Simple_repeat 3 58 0 380 267 48 0 chr2 66625100 66625246 -186631337 - L1ME4a LINE L1 -286 5835 5683 1460 75 9 13 chr2 66626452 66626679 -186629904 - L1P4 LINE L1 -651 5510 5285 1485 234 44 8 chr2 66626711 66627078 -186629505 - L1ME3A LINE L1 -297 5873 5494 703 216 98 24 chr2 66628461 66628748 -186627835 - HAL1b LINE L1 -29 1319 1012 426 121 0 0 chr2 66628976 66629042 -186627541 + (GGAA)n Simple_repeat Simple_repeat 3 68 0 427 232 255 12 chr2 66629691 66629901 -186626682 - MIR SINE MIR -6 256 3 350 315 32 72 chr2 66631902 66632153 -186624430 - L1ME LINE L1 -375 5746 5506 240 86 0 0 chr2 66632364 66632399 -186624184 + (CA)n Simple_repeat Simple_repeat 1 35 0 620 260 102 8 chr2 66632451 66632783 -186623800 - L1ME LINE L1 -445 5708 5324 4958 118 186 25 chr2 66632783 66633848 -186622735 + MER11B LTR ERVK 1 1236 0 1817 282 80 34 chr2 66633864 66635363 -186621220 - L1ME LINE L1 -840 5289 3722 378 302 71 33 chr2 66635345 66635765 -186620818 - L1ME LINE L1 -5221 898 463 * 2176 128 27 27 chr2 66636114 66636480 -186620103 + MER47A DNA MER2_type 1 366 0 2033 264 71 9 chr2 66637229 66638079 -186618504 - L1M4 LINE L1 -1992 4154 3253 206 362 0 0 chr2 66638602 66638696 -186617887 + (CCA)n Simple_repeat Simple_repeat 3 96 0 1746 106 4 8 chr2 66639488 66639723 -186616860 - AluSq SINE Alu -79 234 1 2370 114 64 55 chr2 66639905 66639953 -186616630 - MSTA LTR MaLR 0 428 382 2061 130 10 0 chr2 66639953 66640254 -186616329 + AluSx SINE Alu 1 304 -8 2370 114 64 55 chr2 66640254 66640627 -186615956 - MSTA LTR MaLR -46 382 3 1366 270 29 29 chr2 66640690 66641146 -186615437 - LTR16A1 LTR ERVL -1 456 1 491 237 117 86 chr2 66641357 66641586 -186614997 - MLT1J1 LTR MaLR 0 446 226 1901 249 75 14 chr2 66641586 66642095 -186614488 - MLT1F LTR MaLR 0 542 3 491 237 117 86 chr2 66642095 66642290 -186614293 - MLT1J1 LTR MaLR -220 226 1 318 246 82 30 chr2 66643451 66643585 -186612998 + MIR SINE MIR 92 232 -30 272 279 29 0 chr2 66643631 66643699 -186612884 - MIR SINE MIR -121 141 72 982 245 89 33 chr2 66644424 66644783 -186611800 + MLT1I LTR MaLR 5 383 -26 2083 145 0 3 chr2 66645232 66645543 -186611040 - AluJb SINE Alu -2 310 1 2254 107 0 10 chr2 66645574 66645884 -186610699 - AluSx SINE Alu -5 307 1 752 178 69 52 chr2 66645947 66646121 -186610462 + MER69A DNA AcHobo 1 177 0 1419 286 89 8 chr2 66646237 66647056 -186609527 - MER45C DNA AcHobo 0 953 30 2074 160 63 24 chr2 66647850 66648231 -186608352 + MSTD LTR MaLR 1 396 0 2873 69 26 3 chr2 66648281 66648672 -186607911 - MLT2A1 LTR ERVL -44 400 1 2187 137 76 37 chr2 66649282 66649690 -186606893 - MSTC LTR MaLR -4 424 1 744 226 42 47 chr2 66650021 66650211 -186606372 + MIR SINE MIR 28 216 -46 204 40 0 0 chr2 66650702 66650727 -186605856 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 312 233 117 50 chr2 66650762 66650882 -186605701 + MIR3 SINE MIR 3 130 -78 23 33 0 0 chr2 66650984 66651014 -186605569 + AT_rich Low_complexity Low_complexity 1 30 0 526 225 82 76 chr2 66651584 66651788 -186604795 + MIR SINE MIR 2 202 -60 580 186 72 60 chr2 66651832 66651999 -186604584 + MER96 DNA MER1_type? 7 175 0 9318 203 14 4 chr2 66652393 66655301 -186601282 + L1PA15 LINE L1 3220 6165 0 341 306 81 137 chr2 66656740 66657036 -186599547 - L2 LINE L2 -8 3264 2998 10359 27 7 140 chr2 66657036 66658630 -186597953 - SVA Other Other 0 1386 5 341 306 81 137 chr2 66658630 66658764 -186597819 - L2 LINE L2 -274 2998 2858 375 333 54 22 chr2 66658791 66659013 -186597570 - L2 LINE L2 -602 2712 2484 1870 131 10 21 chr2 66659882 66660205 -186596378 - AluSx SINE Alu 0 312 1 25 56 0 42 chr2 66660542 66660614 -186595969 + AT_rich Low_complexity Low_complexity 1 69 0 722 285 71 78 chr2 66660888 66661312 -186595271 + LTR33 LTR ERVL 97 517 -4 400 309 148 26 chr2 66661342 66661572 -186595011 - L1M4 LINE L1 -3654 2492 2235 3511 109 22 5 chr2 66661598 66662222 -186594361 + L1P5 LINE L1 5163 5795 -361 23 0 0 0 chr2 66663342 66663365 -186593218 + AT_rich Low_complexity Low_complexity 1 23 0 186 377 0 0 chr2 66663437 66663498 -186593085 + MIR SINE MIR 62 122 -140 277 349 121 0 chr2 66664232 66664398 -186592185 - L3b LINE CR1 -120 1463 1278 2645 155 113 6 chr2 66665040 66665484 -186591099 - L1MB5 LINE L1 -8 6166 5656 1986 113 0 0 chr2 66665484 66665766 -186590817 - AluY SINE Alu -3 308 27 2645 155 113 6 chr2 66665766 66665845 -186590738 - L1MB5 LINE L1 -518 5656 5587 2031 195 150 4 chr2 66666346 66666865 -186589718 + L1MC4 LINE L1 6652 7246 -796 6017 94 22 22 chr2 66666891 66667925 -186588658 - L1PA10 LINE L1 -4 6479 5433 2247 96 0 10 chr2 66667925 66668228 -186588355 - AluSc SINE Alu -9 300 1 6017 94 22 22 chr2 66668228 66668442 -186588141 - L1PA10 LINE L1 -1049 5434 5221 3678 64 0 0 chr2 66668442 66668902 -186587681 - L1PA6 LINE L1 -6 6148 5683 21567 154 35 61 chr2 66668902 66669173 -186587410 - L1PA10 LINE L1 -1227 5234 4958 1795 134 40 11 chr2 66669173 66669476 -186587107 - AluSp SINE Alu 0 311 1 21567 154 35 61 chr2 66669476 66670867 -186585716 - L1PA10 LINE L1 -1503 4958 3533 2328 94 3 3 chr2 66670867 66671175 -186585408 - AluSg SINE Alu 0 310 3 21567 154 35 61 chr2 66671175 66673602 -186582981 - L1PA10 LINE L1 -2928 3533 1138 180 77 0 0 chr2 66673602 66673628 -186582955 + (TTG)n Simple_repeat Simple_repeat 2 27 0 21567 154 35 61 chr2 66673628 66674692 -186581891 - L1PA10 LINE L1 -5323 1138 48 2851 226 68 14 chr2 66674686 66674759 -186581824 + L1MC4 LINE L1 7231 7299 -743 * 1856 84 4 4 chr2 66674759 66674996 -186581587 - AluSq SINE Alu -18 295 59 2851 226 68 14 chr2 66674996 66675691 -186580892 + L1MC4 LINE L1 7299 8040 -2 441 92 66 0 chr2 66676824 66676900 -186579683 + L1PA16 LINE L1 6086 6166 0 817 159 8 0 chr2 66677332 66677464 -186579119 + FLAM_C SINE Alu 1 133 0 2244 132 91 10 chr2 66677765 66678159 -186578424 - MSTB LTR MaLR 0 426 1 264 375 29 19 chr2 66678336 66678544 -186578039 - L2 LINE L2 -769 2545 2336 216 97 0 0 chr2 66678618 66678649 -186577934 + (TA)n Simple_repeat Simple_repeat 2 32 0 253 228 0 43 chr2 66678653 66678745 -186577838 - L1MC4 LINE L1 -1341 6701 6614 * 260 241 24 0 chr2 66678665 66678748 -186577835 + L1MC4 LINE L1 6614 6698 -1344 586 310 150 12 chr2 66678766 66679092 -186577491 - L2 LINE L2 -1093 2221 1851 432 0 0 0 chr2 66679184 66679232 -186577351 + (TG)n Simple_repeat Simple_repeat 2 49 0 2173 96 3 3 chr2 66679631 66679932 -186576651 - AluSg SINE Alu -3 307 7 448 279 65 79 chr2 66680015 66680151 -186576432 - L1ME LINE L1 -2963 3166 3030 2191 117 7 3 chr2 66680151 66680458 -186576125 - AluSx SINE Alu -4 308 1 448 279 65 79 chr2 66680458 66680631 -186575952 - L1ME LINE L1 -3099 3030 2856 807 158 0 8 chr2 66680631 66680764 -186575819 + FLAM_A SINE Alu 1 132 -1 448 279 65 79 chr2 66680764 66680939 -186575644 - L1ME LINE L1 -3273 2856 2591 680 245 66 4 chr2 66680993 66681266 -186575317 - L1ME LINE L1 -3639 2490 2201 4771 143 64 32 chr2 66681356 66681826 -186574757 - L1MA4 LINE L1 -5 6295 5842 324 48 0 0 chr2 66681826 66681868 -186574715 + (TG)n Simple_repeat Simple_repeat 2 43 0 4771 143 64 32 chr2 66681868 66682361 -186574222 - L1MA4 LINE L1 -458 5842 5301 230 270 0 43 chr2 66682355 66682470 -186574113 - L1ME LINE L1 -5100 1019 910 * 537 347 120 40 chr2 66682567 66683091 -186573492 - L1ME LINE L1 -5286 833 268 22 0 0 0 chr2 66683549 66683571 -186573012 + AT_rich Low_complexity Low_complexity 1 22 0 326 129 16 0 chr2 66684025 66684087 -186572496 + CT-rich Low_complexity Low_complexity 2 64 0 327 104 0 0 chr2 66684087 66684135 -186572448 + (CA)n Simple_repeat Simple_repeat 1 48 0 24 67 0 0 chr2 66684978 66685023 -186571560 + AT_rich Low_complexity Low_complexity 1 45 0 30 83 0 0 chr2 66685802 66685874 -186570709 + AT_rich Low_complexity Low_complexity 1 72 0 23 33 0 0 chr2 66686701 66686731 -186569852 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr2 66686762 66686790 -186569793 + AT_rich Low_complexity Low_complexity 1 28 0 204 290 16 0 chr2 66687412 66687474 -186569109 + (TATG)n Simple_repeat Simple_repeat 4 66 0 1721 171 20 7 chr2 66688152 66688450 -186568133 + AluSx SINE Alu 1 302 -10 1118 133 51 61 chr2 66688452 66688648 -186567935 + AluJb SINE Alu 84 277 -35 255 31 0 0 chr2 66688651 66688683 -186567900 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 21 36 0 0 chr2 66689243 66689271 -186567312 + AT_rich Low_complexity Low_complexity 1 28 0 1774 146 36 0 chr2 66689715 66689996 -186566587 - AluSx SINE Alu -6 306 16 683 355 109 38 chr2 66691488 66692354 -186564229 - L2 LINE L2 0 3272 2342 1660 160 0 8 chr2 66692357 66692620 -186563963 + AluSx SINE Alu 1 261 -51 2245 90 0 37 chr2 66692760 66693082 -186563501 + AluSq SINE Alu 1 310 -3 1469 186 10 28 chr2 66695362 66695653 -186560930 - AluJo SINE Alu -26 286 1 1326 259 80 56 chr2 66696569 66697070 -186559513 - LTR33 LTR ERVL -3 518 6 633 288 118 19 chr2 66748886 66749258 -186507325 - HAL1 LINE L1 -845 1662 1254 2212 109 0 3 chr2 66749435 66749729 -186506854 + AluSg SINE Alu 9 301 -9 1098 153 42 11 chr2 66749939 66750129 -186506454 + AluJo SINE Alu 11 206 -106 1833 103 0 42 chr2 66750229 66750490 -186506093 - AluSc SINE Alu -45 264 15 180 246 0 33 chr2 66751846 66751907 -186504676 + L2 LINE L2 2294 2352 -962 250 241 0 35 chr2 66752014 66752072 -186504511 + L2 LINE L2 3192 3247 -25 360 313 69 37 chr2 66752380 66752610 -186503973 + L1MEd LINE L1 878 1161 -1329 1848 106 0 0 chr2 66752610 66752847 -186503736 + AluSq SINE Alu 1 237 -76 344 359 16 31 chr2 66752959 66753151 -186503432 - L3 LINE CR1 -138 1439 1251 548 300 36 39 chr2 66753247 66753390 -186503193 + L1ME LINE L1 5254 5396 -770 806 189 0 0 chr2 66753390 66753522 -186503061 + FLAM_C SINE Alu 1 132 -1 548 300 36 39 chr2 66753522 66753708 -186502875 + L1ME LINE L1 5396 5582 -584 305 342 103 0 chr2 66753861 66754016 -186502567 + L2 LINE L2 3101 3271 -1 530 317 168 4 chr2 66754058 66754326 -186502257 + L3 LINE CR1 700 1011 -566 180 0 0 0 chr2 66754629 66754649 -186501934 + (TA)n Simple_repeat Simple_repeat 1 20 0 892 149 0 0 chr2 66754663 66754784 -186501799 - FLAM_C SINE Alu -11 122 2 436 269 99 35 chr2 66754988 66755050 -186501533 - MIR SINE MIR -1 261 204 1394 170 129 44 chr2 66755050 66755367 -186501216 + MER2 DNA MER2_type 1 344 0 436 269 99 35 chr2 66755367 66755505 -186501078 - MIR SINE MIR -58 204 48 307 226 145 153 chr2 66755906 66756154 -186500429 - MIR SINE MIR 0 262 17 414 232 70 92 chr2 66756155 66756297 -186500286 + MLT1E LTR MaLR 9 147 -446 1496 255 70 5 chr2 66756330 66756699 -186499884 + MLT1E LTR MaLR 201 593 0 44 84 0 0 chr2 66757108 66757215 -186499368 + AT_rich Low_complexity Low_complexity 1 107 0 2411 80 0 3 chr2 66757599 66757899 -186498684 + AluY SINE Alu 1 299 -12 836 119 0 8 chr2 66758925 66759059 -186497524 - L1MA7 LINE L1 -4 6287 6155 522 231 111 0 chr2 66759059 66759167 -186497416 - FLAM_A SINE Alu -22 120 1 1166 101 35 75 chr2 66759167 66759206 -186497377 - L1MA7 LINE L1 -124 6167 6128 2220 106 0 3 chr2 66759206 66759507 -186497076 + AluSg SINE Alu 1 300 -10 1166 101 35 75 chr2 66759507 66759694 -186496889 - L1MA7 LINE L1 -163 6128 5950 225 0 0 0 chr2 66760165 66760190 -186496393 + (TG)n Simple_repeat Simple_repeat 2 26 0 328 302 156 61 chr2 66760554 66761270 -186495313 - L1M2 LINE L1 -5476 1373 525 26 64 0 0 chr2 66761578 66761625 -186494958 + GC_rich Low_complexity Low_complexity 1 47 0 2202 92 16 3 chr2 66763295 66763601 -186492982 - AluSg SINE Alu 0 310 1 207 0 0 0 chr2 66763617 66763640 -186492943 + (T)n Simple_repeat Simple_repeat 1 23 0 1183 137 33 56 chr2 66763683 66763753 -186492830 - L1MB7 LINE L1 0 6184 6114 2144 117 0 0 chr2 66763753 66764051 -186492532 + AluSx SINE Alu 1 298 -14 1183 137 33 56 chr2 66764051 66764250 -186492333 - L1MB7 LINE L1 -70 6114 5921 191 204 91 0 chr2 66764490 66764534 -186492049 - MIR3 SINE MIR -3 205 158 191 255 106 0 chr2 66764501 66764548 -186492035 - L3b LINE CR1 -10 1573 1522 25 51 0 0 chr2 66764889 66764928 -186491655 + AT_rich Low_complexity Low_complexity 1 39 0 730 201 161 0 chr2 66764982 66765156 -186491427 + MER20 DNA MER1_type 1 202 -17 208 106 0 43 chr2 66765608 66765655 -186490928 + (TATG)n Simple_repeat Simple_repeat 4 48 0 497 255 20 67 chr2 66765787 66765936 -186490647 + MIR SINE MIR 66 207 -55 1143 124 0 0 chr2 66766598 66766751 -186489832 - AluSg SINE Alu -157 153 1 564 92 0 82 chr2 66766918 66767113 -186489470 + (TA)n Simple_repeat Simple_repeat 1 179 0 1253 274 99 24 chr2 66767113 66767708 -186488875 - L1MC4 LINE L1 -272 7770 7131 221 341 128 44 chr2 66767734 66768422 -186488161 - L2 LINE L2 -1357 1957 1167 2053 122 3 3 chr2 66769082 66769376 -186487207 - AluSc SINE Alu -15 294 1 26 64 0 0 chr2 66769552 66769599 -186486984 + AT_rich Low_complexity Low_complexity 1 47 0 27 29 0 0 chr2 66769927 66769961 -186486622 + AT_rich Low_complexity Low_complexity 1 34 0 2093 126 7 0 chr2 66770520 66770814 -186485769 + AluSx SINE Alu 1 296 -16 383 266 21 0 chr2 66770839 66770933 -186485650 - AluJb SINE Alu -9 293 198 2264 113 0 0 chr2 66771046 66771347 -186485236 + AluSx SINE Alu 1 301 -11 21 0 0 0 chr2 66771556 66771577 -186485006 + AT_rich Low_complexity Low_complexity 1 21 0 268 349 71 40 chr2 66771580 66771706 -186484877 + MIR SINE MIR 17 146 -62 2214 118 0 3 chr2 66772234 66772531 -186484052 - AluSx SINE Alu -16 296 1 454 358 78 21 chr2 66773027 66773270 -186483313 + L3 LINE CR1 1318 1574 -3 2109 94 17 3 chr2 66773745 66774033 -186482550 + AluSx SINE Alu 2 293 -19 601 275 70 0 chr2 66774058 66774229 -186482354 - MIR SINE MIR -13 249 67 233 327 100 20 chr2 66774454 66774604 -186481979 - L2 LINE L2 -2 3311 3150 371 113 14 28 chr2 66774822 66774893 -186481690 + Charlie4a DNA MER1_type 29 98 -410 335 221 74 4 chr2 66774893 66775041 -186481542 + MER20 DNA MER1_type 1 219 0 1145 194 87 50 chr2 66775041 66775260 -186481323 + Charlie4a DNA MER1_type 91 300 -1661 2679 45 0 0 chr2 66775260 66775571 -186481012 + AluY SINE Alu 1 311 0 1145 194 87 50 chr2 66775571 66775585 -186480998 + Charlie4a DNA MER1_type 300 312 -1649 1942 155 10 0 chr2 66775585 66775876 -186480707 + AluJo SINE Alu 1 294 -18 1145 194 87 50 chr2 66775876 66776044 -186480539 + Charlie4a DNA MER1_type 312 508 0 216 0 0 0 chr2 66776051 66776075 -186480508 + (GATTG)n Simple_repeat Simple_repeat 2 25 0 1739 266 35 23 chr2 66776078 66776803 -186479780 - L1MC4 LINE L1 -566 7476 6744 20726 134 41 10 chr2 66778233 66780503 -186476080 + L1MA3 LINE L1 15 2213 -5352 2063 130 0 3 chr2 66780503 66780795 -186475788 + AluSg SINE Alu 1 291 -19 20726 134 41 10 chr2 66780795 66781413 -186475170 + L1MA3 LINE L1 2213 2810 -4755 2024 134 3 14 chr2 66781413 66781705 -186474878 + AluSx SINE Alu 1 289 -23 20726 134 41 10 chr2 66781705 66782404 -186474179 + L1MA3 LINE L1 2810 3717 -3848 734 167 36 6 chr2 66782413 66782581 -186474002 + L1MA3 LINE L1 3761 3933 -3632 1881 247 55 3 chr2 66782604 66783022 -186473561 + L1MA3 LINE L1 4190 4585 -2980 219 69 0 0 chr2 66783022 66783051 -186473532 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1881 247 55 3 chr2 66783051 66783511 -186473072 + L1MA3 LINE L1 4585 5123 -2442 4350 117 102 21 chr2 66783522 66784531 -186472052 - MER11B LTR ERVK -4 1232 1 7689 47 16 0 chr2 66784531 66785514 -186471069 - HERVK11 LTR ERVK 0 7953 6955 * 8846 60 3 0 chr2 66785500 66786687 -186469896 - HERVK11 LTR ERVK -1186 6767 5525 * 12515 56 22 1 chr2 66786685 66788341 -186468242 - HERVK11 LTR ERVK -3352 4601 2912 * 17729 87 13 0 chr2 66788335 66790797 -186465786 - HERVK11 LTR ERVK -5255 2698 206 2199 96 0 9 chr2 66790794 66791116 -186465467 - HERVK11 LTR ERVK -7634 319 1 * 5443 144 25 53 chr2 66791116 66792218 -186464365 - MER11C LTR ERVK 0 1071 1 6804 161 70 14 chr2 66792226 66794559 -186462024 + L1MA3 LINE L1 5135 7604 -120 351 0 0 0 chr2 66794943 66794982 -186461601 + (TG)n Simple_repeat Simple_repeat 2 40 0 1851 176 3 3 chr2 66795319 66795621 -186460962 - AluJb SINE Alu -5 307 6 197 265 73 15 chr2 66795724 66795792 -186460791 + MIR3 SINE MIR 110 181 -27 24 67 0 0 chr2 66796007 66796052 -186460531 + AT_rich Low_complexity Low_complexity 1 45 0 483 292 82 43 chr2 66796099 66796332 -186460251 - MIR SINE MIR -19 243 2 2371 77 7 0 chr2 66796921 66797218 -186459365 + AluY SINE Alu 1 299 -12 2021 92 67 18 chr2 66797226 66797509 -186459074 + AluSx SINE Alu 1 297 -15 3114 201 30 16 chr2 66797632 66798270 -186458313 - MER82 DNA MER2_type 0 653 7 477 257 9 9 chr2 66799911 66800024 -186456559 - L2 LINE L2 0 3313 3201 2656 245 73 7 chr2 66800049 66801122 -186455461 + L1MEc LINE L1 2402 3403 -3161 2283 109 3 6 chr2 66801122 66801434 -186455149 + AluSx SINE Alu 1 311 -1 2656 245 73 7 chr2 66801434 66801743 -186454840 + L1MEc LINE L1 3403 3690 -2874 2260 117 7 0 chr2 66801743 66802052 -186454531 + AluSx SINE Alu 1 311 -1 2656 245 73 7 chr2 66802052 66802196 -186454387 + L1MEc LINE L1 3690 4019 -2545 304 246 0 0 chr2 66802275 66802344 -186454239 - MER96 DNA MER1_type? -105 70 2 640 124 0 0 chr2 66802346 66802443 -186454140 + L1ME LINE L1 5508 5604 -562 420 143 48 12 chr2 66802444 66802528 -186454055 + L1MEc LINE L1 168 254 -6310 * 2744 184 55 6 chr2 66802521 66803234 -186453349 + L1MEc LINE L1 562 1305 -4852 2098 257 24 21 chr2 66803215 66803534 -186453049 + L1MEc LINE L1 3369 3686 -2878 * 2405 107 0 0 chr2 66803534 66803842 -186452741 + AluSx SINE Alu 1 308 -4 2098 257 24 21 chr2 66803842 66804274 -186452309 + L1MEc LINE L1 3686 4122 -2442 1595 146 4 36 chr2 66804283 66804558 -186452025 - AluJb SINE Alu -1 311 46 250 211 0 0 chr2 66804577 66804629 -186451954 + L1MEc LINE L1 4369 4420 -2144 940 123 104 0 chr2 66804635 66804789 -186451794 + AluSx SINE Alu 3 172 -140 4301 106 16 25 chr2 66804797 66805477 -186451106 - LTR8 LTR ERV1 -9 682 9 999 131 0 0 chr2 66805479 66805616 -186450967 + AluSx SINE Alu 161 297 -13 4955 214 41 19 chr2 66805616 66806817 -186449766 + L1MEc LINE L1 4425 5661 -903 1336 190 57 25 chr2 66806817 66807096 -186449487 + AluJo SINE Alu 1 288 -24 4955 214 41 19 chr2 66807096 66807259 -186449324 + L1MEc LINE L1 5661 5819 -745 1476 117 41 15 chr2 66807305 66807571 -186449012 + L1MC/D LINE L1 5315 5587 -2408 2002 147 27 0 chr2 66807766 66808066 -186448517 - AluSx SINE Alu -4 308 1 538 223 58 0 chr2 66808765 66808868 -186447715 + FLAM_A SINE Alu 1 109 -33 1087 322 128 48 chr2 66809091 66810186 -186446397 - L2 LINE L2 -337 2977 1795 230 178 137 14 chr2 66810276 66810349 -186446234 + MER96 DNA MER1_type? 91 172 -3 354 127 0 0 chr2 66810356 66810427 -186446156 + (TA)n Simple_repeat Simple_repeat 2 72 0 225 0 0 0 chr2 66810432 66810457 -186446126 + (TG)n Simple_repeat Simple_repeat 2 26 0 244 315 97 46 chr2 66810466 66810704 -186445879 - L2 LINE L2 -1608 1706 1457 3353 114 64 12 chr2 66810895 66811396 -186445187 - MER1A DNA MER1_type 0 527 1 254 303 26 13 chr2 66811490 66811566 -186445017 + L2 LINE L2 3236 3312 -1 1934 155 0 34 chr2 66811849 66812240 -186444343 - AluSx SINE Alu 0 380 1 350 151 0 23 chr2 66812240 66812257 -186444326 + CT-rich Low_complexity Low_complexity 2 180 0 232 100 0 0 chr2 66812272 66812312 -186444271 - L1MA8 LINE L1 -5 6286 6247 2094 113 3 17 chr2 66812934 66813235 -186443348 - AluSx SINE Alu -13 299 3 245 275 150 25 chr2 66813250 66813370 -186443213 + L2 LINE L2 3179 3313 0 203 130 0 43 chr2 66813470 66813516 -186443067 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 196 382 91 27 chr2 66813524 66813634 -186442949 - L2 LINE L2 -35 3237 3121 319 345 180 19 chr2 66813863 66814225 -186442358 - L2 LINE L2 -429 2885 2466 2282 104 0 3 chr2 66815166 66815475 -186441108 - AluSg SINE Alu -2 308 1 285 315 27 0 chr2 66816762 66816835 -186439748 - MER5C DNA MER1_type -249 75 1 414 291 85 7 chr2 66817673 66817814 -186438769 + MIR SINE MIR 99 250 -12 21 57 0 0 chr2 66818975 66819010 -186437573 + AT_rich Low_complexity Low_complexity 1 35 0 258 362 10 71 chr2 66819439 66819635 -186436948 - L2 LINE L2 0 3313 3130 1203 183 0 129 chr2 66820423 66820622 -186435961 - AluSq SINE Alu -12 291 151 2280 97 3 0 chr2 66820622 66820931 -186435652 - AluSx SINE Alu -2 310 1 1203 183 0 129 chr2 66820931 66821065 -186435518 - AluSq SINE Alu -152 151 1 1218 161 0 10 chr2 66821962 66822155 -186434428 - AluJo SINE Alu -38 274 84 672 246 36 24 chr2 66822687 66822854 -186433729 + MER5B DNA MER1_type 4 172 -6 23 0 0 0 chr2 66823125 66823148 -186433435 + AT_rich Low_complexity Low_complexity 1 23 0 2520 60 0 0 chr2 66823208 66823509 -186433074 - AluY SINE Alu -10 301 1 409 234 103 48 chr2 66823888 66824033 -186432550 - MIR SINE MIR -11 251 99 2992 235 74 43 chr2 66825518 66826658 -186429925 - L1MC5 LINE L1 -176 7785 6611 264 296 76 23 chr2 66826728 66826900 -186429683 + L1MC4a LINE L1 6415 6595 -1213 213 121 0 0 chr2 66826948 66826981 -186429602 + (TCTA)n Simple_repeat Simple_repeat 2 34 0 300 263 0 0 chr2 66826985 66827061 -186429522 - L1MC5 LINE L1 -1880 5928 5853 795 196 43 83 chr2 66827077 66827237 -186429346 + MER106A DNA MER1_type 1 151 -85 2134 137 0 3 chr2 66827237 66827543 -186429040 + AluSx SINE Alu 1 305 -7 795 196 43 83 chr2 66827543 66827612 -186428971 + MER106A DNA MER1_type 151 221 -15 622 296 80 11 chr2 66827618 66827882 -186428701 - L1MC5 LINE L1 -1958 5850 5569 30 59 0 0 chr2 66828226 66828277 -186428306 + AT_rich Low_complexity Low_complexity 1 51 0 275 193 88 0 chr2 66828600 66828657 -186427926 + L2 LINE L2 3252 3313 0 14908 125 90 5 chr2 66828807 66831308 -186425275 + Tigger2 DNA MER2_type 4 2718 0 1713 136 77 21 chr2 66831968 66832255 -186424328 + AluJo SINE Alu 1 303 -9 1747 164 27 7 chr2 66832544 66832843 -186423740 + AluJo SINE Alu 6 310 -2 678 274 70 40 chr2 66833503 66833876 -186422707 - L1ME4a LINE L1 -207 5914 5531 2481 229 36 5 chr2 66834182 66834762 -186421821 + L1ME3A LINE L1 5550 6147 -23 5537 93 31 4 chr2 66835123 66835918 -186420665 - L1PA13 LINE L1 -14 6149 5333 272 283 9 19 chr2 66836104 66836210 -186420373 - LTR33 LTR ERVL -20 501 397 263 293 0 24 chr2 66836412 66836494 -186420089 - LTR33 LTR ERVL -441 80 1 1923 157 0 22 chr2 66836638 66836957 -186419626 + AluJb SINE Alu 1 312 0 674 243 77 45 chr2 66837514 66837736 -186418847 - MIR SINE MIR -31 231 3 2159 104 14 0 chr2 66838617 66838914 -186417669 - AluSx SINE Alu -11 301 1 298 176 0 0 chr2 66838956 66839007 -186417576 - L1MC4 LINE L1 -373 7669 7619 1842 183 0 6 chr2 66839140 66839452 -186417131 + AluJb SINE Alu 1 310 -2 811 181 35 110 chr2 66839945 66840172 -186416411 - MER6B DNA MER2_type 0 210 1 719 235 107 58 chr2 66840422 66840611 -186415972 + L1ME4a LINE L1 5694 5872 -249 2201 104 10 0 chr2 66840611 66840899 -186415684 + AluSc SINE Alu 1 291 -18 719 235 107 58 chr2 66840899 66841112 -186415471 + L1ME4a LINE L1 5872 6118 -3 1915 140 0 0 chr2 66841270 66841548 -186415035 - AluSc SINE Alu -5 304 27 708 188 73 12 chr2 66841734 66841899 -186414684 - L1MB3 LINE L1 -2 6181 6007 2150 108 0 0 chr2 66841901 66842188 -186414395 + AluSq SINE Alu 1 287 -26 1127 201 5 0 chr2 66842210 66842399 -186414184 - MER21B LTR ERV1 -656 207 18 654 202 9 0 chr2 66842399 66842513 -186414070 + FLAM_C SINE Alu 1 115 -18 352 0 42 0 chr2 66842579 66842627 -186413956 + (CA)n Simple_repeat Simple_repeat 2 51 0 3828 172 29 37 chr2 66842628 66843944 -186412639 - L1MB3 LINE L1 -169 6002 4699 358 253 74 49 chr2 66844515 66844677 -186411906 - MLT1K LTR MaLR -41 547 382 237 284 148 0 chr2 66844839 66844920 -186411663 - MLT1K LTR MaLR -325 263 171 386 279 0 33 chr2 66845376 66845498 -186411085 - MLT1L LTR MaLR -4 611 494 694 311 135 14 chr2 66845837 66846275 -186410308 - L2 LINE L2 -16 3297 2807 23 54 0 0 chr2 66847087 66847124 -186409459 + AT_rich Low_complexity Low_complexity 1 37 0 542 323 54 16 chr2 66847182 66847368 -186409215 - MIR3 SINE MIR -7 201 9 1294 171 20 119 chr2 66847477 66847881 -186408702 - L1MC4 LINE L1 0 8042 7679 36713 92 11 11 chr2 66847999 66854145 -186402438 - L1PA7 LINE L1 -3 6151 11 298 251 60 33 chr2 66854319 66854549 -186402034 - MLT1J LTR MaLR -2 458 231 497 295 16 16 chr2 66854684 66854867 -186401716 - L1ME3A LINE L1 -14 6156 5974 1443 270 104 18 chr2 66854872 66855979 -186400604 - L1ME3A LINE L1 -210 5952 4749 659 128 110 0 chr2 66856009 66856118 -186400465 - FLAM_C SINE Alu -21 122 2 247 292 35 0 chr2 66856119 66856232 -186400351 - L1ME3A LINE L1 -1389 4757 4641 627 285 82 24 chr2 66856279 66856486 -186400097 - MLT1J LTR MaLR -292 219 1 1406 132 7 108 chr2 66856984 66857271 -186399312 - L1MB2 LINE L1 -298 5873 5616 2177 68 31 10 chr2 66857336 66857628 -186398955 - AluY SINE Alu -9 302 5 346 288 113 18 chr2 66857955 66858132 -186398451 + MIR3 SINE MIR 8 197 -65 231 279 198 18 chr2 66858506 66858617 -186397966 + L2 LINE L2 3183 3313 0 489 139 0 35 chr2 66858885 66858971 -186397612 + AluJ/FLAM SINE Alu 5 87 -225 925 176 0 0 chr2 66858973 66859126 -186397457 + AluJo/FRAM SINE Alu 138 290 -22 32 26 0 0 chr2 66859924 66859963 -186396620 + AT_rich Low_complexity Low_complexity 1 39 0 650 292 85 17 chr2 66860951 66861187 -186395396 - MIR SINE MIR -10 252 1 185 270 206 32 chr2 66861714 66861840 -186394743 - L2 LINE L2 -1384 1930 1783 1018 245 53 0 chr2 66862707 66862952 -186393631 - MIR SINE MIR -1 261 4 198 350 40 40 chr2 66863071 66863171 -186393412 - MIR SINE MIR -68 140 41 22 0 0 0 chr2 66863248 66863270 -186393313 + AT_rich Low_complexity Low_complexity 1 22 0 473 314 81 18 chr2 66863379 66863604 -186392979 - MIR SINE MIR -13 249 16 249 265 132 44 chr2 66864026 66864162 -186392421 - MLT1L LTR MaLR -52 563 416 343 236 127 0 chr2 66864205 66864315 -186392268 + MIR SINE MIR 139 262 0 333 241 123 65 chr2 66864481 66864651 -186391932 - MIR SINE MIR -49 213 34 2207 86 3 55 chr2 66865535 66865862 -186390721 - AluSp SINE Alu -3 310 1 611 239 67 0 chr2 66866134 66866268 -186390315 - MER96 DNA MER1_type? -32 143 1 850 224 58 29 chr2 66869115 66869320 -186387263 - Charlie1 DNA MER1_type -2537 224 14 633 159 8 32 chr2 66869681 66869807 -186386776 + FRAM SINE Alu 43 165 -11 501 296 34 15 chr2 66870055 66870322 -186386261 - L1MC5 LINE L1 -178 7783 7512 2354 91 0 10 chr2 66870687 66870996 -186385587 + AluSq SINE Alu 1 306 -7 2305 102 3 0 chr2 66870997 66871301 -186385282 + AluSg1 SINE Alu 1 305 -4 678 254 66 44 chr2 66871779 66872007 -186384576 + MIR SINE MIR 28 260 -2 8433 230 94 36 chr2 66872154 66873170 -186383413 - L1ME1 LINE L1 -5 6956 6001 2460 81 3 0 chr2 66873170 66873478 -186383105 - AluSp SINE Alu -4 309 1 8433 230 94 36 chr2 66873478 66873984 -186382599 - L1ME1 LINE L1 -960 6001 5526 747 231 82 5 chr2 66873984 66874179 -186382404 - MER63A DNA MER1_type 0 210 1 8433 230 94 36 chr2 66874179 66876250 -186380333 - L1ME1 LINE L1 -1435 5526 3058 2268 97 3 7 chr2 66876250 66876559 -186380024 - AluSx SINE Alu -4 308 1 8433 230 94 36 chr2 66876559 66877608 -186378975 - L1ME1 LINE L1 -3903 3058 2071 1995 206 22 38 chr2 66877655 66877684 -186378899 - L1ME1 LINE L1 -4945 1478 1450 376 48 48 0 chr2 66877684 66877746 -186378837 + (TTATG)n Simple_repeat Simple_repeat 2 66 0 1952 137 11 0 chr2 66877746 66878030 -186378553 - AluSx SINE Alu -25 287 1 1995 206 22 38 chr2 66878030 66878495 -186378088 - L1ME1 LINE L1 -4971 1452 991 2252 115 3 0 chr2 66878680 66878984 -186377599 - AluSq SINE Alu -8 305 1 1820 268 64 15 chr2 66879035 66879580 -186377003 - L1ME1 LINE L1 -5839 584 13 2230 111 3 0 chr2 66879658 66879965 -186376618 + AluSc SINE Alu 1 308 -1 1359 98 0 6 chr2 66880470 66880653 -186375930 - AluSq SINE Alu -3 310 129 442 256 242 56 chr2 66880712 66880927 -186375656 - MIR SINE MIR -2 260 6 186 258 177 0 chr2 66883528 66883590 -186372993 + MIR3 SINE MIR 82 154 -54 525 279 20 54 chr2 66883691 66883895 -186372688 + MIR SINE MIR 6 202 -60 319 274 60 67 chr2 66884230 66884515 -186372068 - L1MC4 LINE L1 -2 8040 7758 1170 148 6 0 chr2 66885063 66885245 -186371338 - L1MB5 LINE L1 -9 6165 5983 2276 93 7 0 chr2 66885255 66885544 -186371039 - AluSx SINE Alu -21 291 1 21 0 0 0 chr2 66885610 66885631 -186370952 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 66885671 66885699 -186370884 + AT_rich Low_complexity Low_complexity 1 28 0 484 262 177 41 chr2 66885933 66886002 -186370581 - L1ME3 LINE L1 -305 5857 5799 1901 149 7 3 chr2 66886002 66886298 -186370285 - AluJb SINE Alu -15 297 1 484 262 177 41 chr2 66886298 66886715 -186369868 - L1ME3 LINE L1 -363 5799 5305 180 321 75 0 chr2 66889885 66889938 -186366645 + L3 LINE CR1 97 153 -1424 1561 243 211 5 chr2 66891133 66891684 -186364899 + L2 LINE L2 1382 2045 -1269 3392 136 59 5 chr2 66891865 66892439 -186364144 + MER6A DNA MER2_type 1 605 0 902 257 121 50 chr2 66892440 66892779 -186363804 + L2 LINE L2 2941 3303 -10 228 222 56 0 chr2 66893785 66893839 -186362744 + L2 LINE L2 3252 3308 -5 211 286 32 32 chr2 66894126 66894189 -186362394 + L2 LINE L2 3205 3267 -5 573 246 97 0 chr2 66894265 66894399 -186362184 + L2 LINE L2 2448 2594 -720 1380 255 104 17 chr2 66894519 66895180 -186361403 + L2 LINE L2 2602 3313 0 2206 103 3 7 chr2 66895480 66895772 -186360811 - AluSx SINE Alu -21 291 1 21 0 0 0 chr2 66896866 66896887 -186359696 + AT_rich Low_complexity Low_complexity 1 21 0 344 341 173 31 chr2 66897580 66898223 -186358360 - L2 LINE L2 0 3313 2536 1682 191 38 30 chr2 66898223 66898594 -186357989 - MLT1A2 LTR MaLR 0 374 1 344 341 173 31 chr2 66898594 66898690 -186357893 - L2 LINE L2 -777 2536 2455 708 143 0 0 chr2 66898691 66898796 -186357787 + AluSc SINE Alu 1 105 -204 400 267 7 59 chr2 66898803 66898938 -186357645 - MLT1K LTR MaLR -62 526 399 292 292 14 0 chr2 66898938 66899010 -186357573 - L2 LINE L2 -4 3309 3237 439 209 0 0 chr2 66899012 66899098 -186357485 + L1ME3A LINE L1 4078 4163 -1983 2352 87 0 3 chr2 66899125 66899424 -186357159 + AluSc SINE Alu 1 298 -11 678 215 104 59 chr2 66899433 66899586 -186356997 + L1ME3A LINE L1 5167 5312 -858 1395 6 0 0 chr2 66899586 66899744 -186356839 + L1PA2 LINE L1 5998 6155 0 678 215 104 59 chr2 66899744 66900363 -186356220 + L1ME3A LINE L1 5312 6170 0 794 289 64 29 chr2 66900412 66900724 -186355859 - MLT1K LTR MaLR -180 408 86 370 337 64 44 chr2 66901188 66901437 -186355146 + L2 LINE L2 3019 3272 0 370 253 200 33 chr2 66901455 66901605 -186354978 - MIR SINE MIR -73 189 15 240 349 136 37 chr2 66901668 66902072 -186354511 + L2 LINE L2 2829 3272 0 2525 104 19 16 chr2 66902182 66902556 -186354027 + THE1C LTR MaLR 1 375 0 294 29 0 0 chr2 66902864 66902899 -186353684 + (CA)n Simple_repeat Simple_repeat 2 36 0 214 106 43 0 chr2 66902905 66902952 -186353631 + GA-rich Low_complexity Low_complexity 2 50 0 26 0 0 0 chr2 66904438 66904464 -186352119 + AT_rich Low_complexity Low_complexity 1 26 0 31 44 0 0 chr2 66904649 66904694 -186351889 + AT_rich Low_complexity Low_complexity 1 45 0 2214 96 0 0 chr2 66904694 66904998 -186351585 - AluSg SINE Alu 0 304 1 2196 110 0 7 chr2 66905146 66905455 -186351128 - AluSx SINE Alu -5 307 1 3472 194 48 26 chr2 66905460 66906322 -186350261 - L1ME1 LINE L1 -18 6148 5271 407 228 47 8 chr2 66906341 66906468 -186350115 - L1ME4a LINE L1 -34 6087 5956 1262 255 84 74 chr2 66906635 66907354 -186349229 + HAL1 LINE L1 701 1411 -1096 1742 163 0 20 chr2 66907354 66907649 -186348934 + AluJb SINE Alu 1 289 -23 1262 255 84 74 chr2 66907649 66908382 -186348201 + HAL1 LINE L1 1411 2483 -24 668 197 0 36 chr2 66908383 66908520 -186348063 + FLAM_A SINE Alu 1 132 -1 704 252 30 46 chr2 66908541 66908769 -186347814 - L1ME4a LINE L1 -481 5640 5472 2141 122 3 0 chr2 66908769 66909065 -186347518 + AluSg SINE Alu 1 297 -13 704 252 30 46 chr2 66909065 66909092 -186347491 - L1ME4a LINE L1 -649 5472 5446 5466 51 108 8 chr2 66909117 66910275 -186346308 - SVA Other Other -955 1385 1 411 264 0 0 chr2 66910280 66910405 -186346178 + T-rich Low_complexity Low_complexity 1 125 0 37 161 0 0 chr2 66910406 66910468 -186346115 + GC_rich Low_complexity Low_complexity 1 62 0 472 289 52 38 chr2 66911102 66911313 -186345270 - L1MC/D LINE L1 -2211 5597 5384 593 197 73 46 chr2 66911544 66911762 -186344821 - L1MC5 LINE L1 -44 7917 7694 781 182 0 8 chr2 66911804 66911936 -186344647 + FRAM SINE Alu 20 150 -26 1036 186 39 88 chr2 66911948 66912254 -186344329 - L1ME3A LINE L1 -62 6108 5818 756 198 71 121 chr2 66912315 66912409 -186344174 - L1ME3A LINE L1 -367 5803 5706 1616 104 175 0 chr2 66912409 66912660 -186343923 + AluSg SINE Alu 1 295 -15 756 198 71 121 chr2 66912660 66912904 -186343679 - L1ME3A LINE L1 -464 5706 5482 769 262 18 0 chr2 66912905 66913069 -186343514 - LTR16A LTR ERVL -20 430 264 641 137 0 20 chr2 66913070 66913172 -186343411 - AluJb SINE Alu -12 300 201 2038 150 3 0 chr2 66913220 66913526 -186343057 - AluSx SINE Alu -5 307 1 1160 149 0 0 chr2 66913858 66914033 -186342550 - AluSp SINE Alu -18 295 121 626 196 152 25 chr2 66914200 66914305 -186342278 - MER5A DNA MER1_type -2 187 54 481 60 194 0 chr2 66914305 66914372 -186342211 - MADE1 DNA Mariner 0 80 1 626 196 152 25 chr2 66914372 66914424 -186342159 - MER5A DNA MER1_type -135 54 10 2369 98 3 0 chr2 66914643 66914949 -186341634 + AluSq SINE Alu 1 307 -6 22 35 0 0 chr2 66915216 66915245 -186341338 + AT_rich Low_complexity Low_complexity 1 29 0 2289 92 0 3 chr2 66915553 66915846 -186340737 + AluSg SINE Alu 1 292 -18 207 0 0 0 chr2 66915861 66915884 -186340699 + (CA)n Simple_repeat Simple_repeat 2 24 0 738 261 63 89 chr2 66916590 66917141 -186339442 - MER34 LTR ERV1 -3 539 3 2437 80 10 0 chr2 66917314 66917615 -186338968 - AluSp SINE Alu -9 304 1 2437 72 0 7 chr2 66918488 66918792 -186337791 - AluY SINE Alu -9 302 1 1977 127 6 32 chr2 66918947 66919263 -186337320 - AluSx SINE Alu -4 308 1 887 175 25 6 chr2 66919462 66919622 -186336961 - MER3 DNA MER1_type -46 163 1 603 262 44 44 chr2 66919790 66919849 -186336734 - MIR SINE MIR -8 254 196 4598 111 19 3 chr2 66919849 66920491 -186336092 + MER39B LTR ERV1 1 652 -1 603 262 44 44 chr2 66920491 66920637 -186335946 - MIR SINE MIR -65 197 49 22 0 0 0 chr2 66921087 66921109 -186335474 + AT_rich Low_complexity Low_complexity 1 22 0 2233 102 7 0 chr2 66921363 66921666 -186334917 - AluSp SINE Alu -8 305 1 216 97 0 0 chr2 66922747 66922778 -186333805 + (TA)n Simple_repeat Simple_repeat 1 31 0 615 288 88 102 chr2 66923502 66923816 -186332767 - L1ME3A LINE L1 -273 5897 5580 432 37 0 0 chr2 66923816 66923870 -186332713 + (CA)n Simple_repeat Simple_repeat 1 54 0 615 288 88 102 chr2 66923870 66924189 -186332394 - L1ME3A LINE L1 -590 5580 5259 2962 171 35 15 chr2 66924189 66924727 -186331856 + MER44D DNA MER2_type 2 605 0 615 288 88 102 chr2 66924727 66924962 -186331621 - L1ME3A LINE L1 -911 5259 5022 411 343 7 15 chr2 66925197 66925334 -186331249 + L2 LINE L2 2560 2695 -619 331 127 18 0 chr2 66925334 66925389 -186331194 + MIR SINE MIR 206 261 -1 267 31 0 0 chr2 66925408 66925440 -186331143 + (TTA)n Simple_repeat Simple_repeat 3 34 0 2331 88 0 3 chr2 66925659 66925956 -186330627 + AluSc SINE Alu 1 296 -13 626 223 36 18 chr2 66926046 66926212 -186330371 - LTR41 LTR ERVL 0 773 605 586 134 80 139 chr2 66926235 66926422 -186330161 - MER106A DNA MER1_type -26 210 35 739 159 53 24 chr2 66926694 66926864 -186329719 - LTR41 LTR ERVL -588 185 11 1531 98 15 0 chr2 66926998 66927201 -186329382 + AluSp SINE Alu 1 206 -107 2148 69 0 4 chr2 66927201 66927463 -186329120 + AluY SINE Alu 40 300 -11 196 346 10 10 chr2 66928058 66928159 -186328424 + MIR3 SINE MIR 54 154 -54 1988 128 7 29 chr2 66928209 66928515 -186328068 + AluJb SINE Alu 1 299 -13 2524 77 0 3 chr2 66928728 66929038 -186327545 + AluSg SINE Alu 1 309 -1 252 246 0 0 chr2 66929038 66929107 -186327476 + (CATATA)n Simple_repeat Simple_repeat 5 73 0 578 284 131 53 chr2 66929276 66929481 -186327102 + LTR33 LTR ERVL 21 209 -312 2392 69 3 13 chr2 66929481 66929784 -186326799 - AluSg1 SINE Alu -9 300 1 578 284 131 53 chr2 66929784 66929990 -186326593 + LTR33 LTR ERVL 209 464 -57 364 177 0 0 chr2 66929992 66930054 -186326529 + Alu SINE Alu 241 302 0 320 161 0 32 chr2 66930057 66930119 -186326464 + LTR33 LTR ERVL 456 515 -6 1862 98 116 33 chr2 66930180 66930456 -186326127 - AluSg SINE Alu -11 299 1 192 40 0 0 chr2 66930542 66930567 -186326016 + (TACTG)n Simple_repeat Simple_repeat 1 25 0 1918 147 29 20 chr2 66930884 66931190 -186325393 - AluJb SINE Alu -2 310 2 1070 274 103 52 chr2 66931802 66932639 -186323944 - L2 LINE L2 -5 3308 2418 2336 93 7 0 chr2 66933184 66933486 -186323097 + AluY SINE Alu 1 304 -7 213 296 250 15 chr2 66934790 66934922 -186321661 + MIR SINE MIR 13 175 -87 478 298 124 28 chr2 66935172 66935535 -186321048 - MLT1K LTR MaLR -23 565 168 247 286 0 32 chr2 66935552 66935613 -186320970 - MLT1L LTR MaLR -409 206 148 226 198 306 25 chr2 66935613 66935734 -186320849 + MER20B DNA MER1_type 1 155 -628 2302 103 0 3 chr2 66936095 66936396 -186320187 + AluSq SINE Alu 1 300 -13 2101 92 39 4 chr2 66936400 66936681 -186319902 + AluSc SINE Alu 7 297 -12 2022 93 21 10 chr2 66936707 66936998 -186319585 - AluY SINE Alu -17 294 1 846 213 17 23 chr2 66936998 66937172 -186319411 - AluSg/x SINE Alu -17 293 121 644 174 101 55 chr2 66937182 66937503 -186319080 + LTR56-int LTR ERV1 1192 3137 -3194 2319 99 0 0 chr2 66937504 66937808 -186318775 + AluSq SINE Alu 1 304 -9 296 243 57 68 chr2 66937852 66938029 -186318554 + LTR56-int LTR ERV1 1679 1853 -3083 1964 103 18 3 chr2 66938117 66938399 -186318184 + AluSx SINE Alu 1 286 -26 623 202 6 44 chr2 66938419 66938600 -186317983 + LTR56-int LTR ERV1 1607 2865 -2015 1231 117 0 4 chr2 66938600 66938822 -186317761 + AluSq SINE Alu 2 304 -9 5874 157 37 42 chr2 66938822 66938969 -186317614 + LTR56-int LTR ERV1 4413 4559 -564 2287 106 0 3 chr2 66938969 66939271 -186317312 + AluSq SINE Alu 3 303 -10 2035 129 0 16 chr2 66939273 66939576 -186317007 + AluSg SINE Alu 3 300 -10 5874 157 37 42 chr2 66939576 66939667 -186316916 + LTR56-int LTR ERV1 4560 4650 -473 1943 133 20 0 chr2 66939667 66939960 -186316623 - AluSx SINE Alu -13 299 1 5874 157 37 42 chr2 66939960 66941134 -186315449 + LTR56-int LTR ERV1 4650 5027 -96 1276 172 51 76 chr2 66941217 66941690 -186314893 + LTR56 LTR ERV1 9 437 0 706 206 47 29 chr2 66941690 66941859 -186314724 + MLT1J LTR MaLR 10 181 -330 4270 125 68 37 chr2 66941864 66942505 -186314078 - LTR8A LTR ERV1 0 727 61 2371 87 0 3 chr2 66942505 66942805 -186313778 - AluY SINE Alu -12 299 1 4270 125 68 37 chr2 66942805 66942868 -186313715 - LTR8A LTR ERV1 -666 61 1 549 138 11 11 chr2 66942868 66942955 -186313628 - LTR8 LTR ERV1 -524 167 81 2393 78 251 0 chr2 66942955 66943313 -186313270 - LTR7 LTR ERV1 -2 448 1 2445 82 53 16 chr2 66943313 66943691 -186312892 - HERVH LTR ERV1 0 7713 7322 1240 127 36 41 chr2 66943689 66943850 -186312733 - HERVH LTR ERV1 -1894 5819 5658 * 1714 145 117 70 chr2 66943850 66944278 -186312305 + LTR7 LTR ERV1 1 448 -2 1240 127 36 41 chr2 66944278 66944337 -186312246 - HERVH LTR ERV1 -2055 5658 5600 4275 138 20 1 chr2 66944338 66944988 -186311595 - HERVH LTR ERV1 -2564 5149 4488 3435 107 4 4 chr2 66944990 66945484 -186311099 - HERVH LTR ERV1 -3720 3993 3500 876 151 20 0 chr2 66945483 66945629 -186310954 - HERVH LTR ERV1 -4423 3290 3142 * 6866 88 6 7 chr2 66945625 66946582 -186310001 - HERVH LTR ERV1 -4726 2987 2032 443 306 83 105 chr2 66947227 66947382 -186309201 - L2 LINE L2 -1 3271 3114 5257 89 25 7 chr2 66947382 66948109 -186308474 + L1MA3 LINE L1 5566 6305 0 443 306 83 105 chr2 66948109 66948532 -186308051 - L2 LINE L2 -158 3114 2710 2111 116 3 0 chr2 66948532 66948825 -186307758 + AluSq SINE Alu 1 294 -19 443 306 83 105 chr2 66948825 66949048 -186307535 - L2 LINE L2 -562 2710 2484 1797 126 3 86 chr2 66949087 66949436 -186307147 + LTR9 LTR ERV1 1 320 -292 431 309 94 40 chr2 66949456 66949814 -186306769 - L2 LINE L2 -1198 2116 1736 1780 82 4 9 chr2 66949814 66950045 -186306538 - AluY SINE Alu -81 230 1 431 309 94 40 chr2 66950045 66950058 -186306525 - L2 LINE L2 -1578 1736 1725 366 288 171 31 chr2 66950058 66950280 -186306303 - L2 LINE L2 -1885 1429 1177 889 285 51 7 chr2 66950330 66950604 -186305979 - MLT1J LTR MaLR -2 509 224 715 129 57 0 chr2 66950608 66950707 -186305876 + LTR8A LTR ERV1 1 106 -621 482 118 0 0 chr2 66950707 66950775 -186305808 + LTR7 LTR ERV1 1 68 -382 8458 73 8 37 chr2 66950778 66952000 -186304583 + HERVH LTR ERV1 665 1851 -5862 4649 135 26 10 chr2 66952444 66953172 -186303411 - L1MA3 LINE L1 0 6305 5566 270 268 195 16 chr2 66953204 66953327 -186303256 + L2 LINE L2 3168 3312 -1 2292 107 3 0 chr2 66955299 66955597 -186300986 + AluSp SINE Alu 1 299 -14 399 245 94 9 chr2 66956484 66956590 -186299993 - MARNA DNA Mariner -16 570 456 237 167 0 37 chr2 66956624 66956678 -186299905 + GA-rich Low_complexity Low_complexity 3 54 0 1895 113 10 23 chr2 66956915 66957216 -186299367 - AluSx SINE Alu -15 297 1 26 0 0 0 chr2 66957923 66957949 -186298634 + AT_rich Low_complexity Low_complexity 1 26 0 183 289 0 0 chr2 66958344 66958389 -186298194 - L2 LINE L2 -1 3312 3268 384 309 63 44 chr2 66958456 66958708 -186297875 + MIR SINE MIR 2 258 -4 2558 24 40 0 chr2 66958859 66959156 -186297427 - AluYa5 SINE Alu -2 309 1 1567 235 101 82 chr2 66959718 66960688 -186295895 + L2 LINE L2 2318 3301 -12 2287 101 0 7 chr2 66960701 66961007 -186295576 + AluSx SINE Alu 1 304 -8 1708 181 0 7 chr2 66961207 66961505 -186295078 + AluJb SINE Alu 1 296 -16 2184 83 7 0 chr2 66961662 66961939 -186294644 + AluY SINE Alu 26 304 -7 2062 79 11 0 chr2 66965586 66965853 -186290730 - AluSp SINE Alu -43 270 1 220 322 134 20 chr2 66968889 66969051 -186287532 + MIR3 SINE MIR 15 194 -14 333 0 0 0 chr2 66969076 66969113 -186287470 + (CA)n Simple_repeat Simple_repeat 2 38 0 495 121 169 0 chr2 66969138 66969221 -186287362 - FLAM_A SINE Alu -26 116 20 615 252 31 13 chr2 66969949 66970108 -186286475 - MIR SINE MIR -1 261 100 22 35 0 0 chr2 66970188 66970217 -186286366 + AT_rich Low_complexity Low_complexity 1 29 0 2076 125 0 13 chr2 66970637 66970941 -186285642 - AluSx SINE Alu -12 300 1 22 0 0 0 chr2 66971231 66971253 -186285330 + AT_rich Low_complexity Low_complexity 1 22 0 2414 77 3 0 chr2 66971736 66972036 -186284547 - AluSg SINE Alu -9 301 1 255 204 0 0 chr2 66972231 66972285 -186284298 + (CATATA)n Simple_repeat Simple_repeat 6 59 0 920 181 0 6 chr2 66972286 66972446 -186284137 - FAM SINE Alu -13 162 4 2009 124 7 16 chr2 66972747 66973053 -186283530 - AluJb SINE Alu -9 303 1 345 300 62 24 chr2 66973212 66973399 -186283184 + MER20B DNA MER1_type 2 198 -21 219 176 20 20 chr2 66974057 66974108 -186282475 - L2 LINE L2 -5 3308 3258 430 247 152 101 chr2 66974150 66974498 -186282085 - L3 LINE CR1 -8 1569 1204 180 176 0 0 chr2 66975340 66975374 -186281209 + (CATATA)n Simple_repeat Simple_repeat 6 39 0 198 171 86 0 chr2 66975426 66975461 -186281122 - L2 LINE L2 -15 3298 3261 * 411 298 120 47 chr2 66975432 66975623 -186280960 - MIR SINE MIR -18 244 40 559 242 72 7 chr2 66976521 66976674 -186279909 - MIR3 SINE MIR -15 193 31 2136 117 7 19 chr2 66976834 66977143 -186279440 - AluSx SINE Alu -7 305 1 2320 102 0 0 chr2 66977594 66977887 -186278696 - AluSx SINE Alu -17 295 3 3102 217 73 19 chr2 66978468 66979310 -186277273 + L1MDa LINE L1 1 1122 -5418 2228 110 3 3 chr2 66979310 66979620 -186276963 + AluSx SINE Alu 1 310 -2 3102 217 73 19 chr2 66979620 66979701 -186276882 + L1MDa LINE L1 1122 1197 -5343 1521 204 176 7 chr2 66979703 66979874 -186276709 + L1MDa LINE L1 1418 1559 -4981 2312 103 3 3 chr2 66979874 66980186 -186276397 + AluSx SINE Alu 1 312 0 1521 204 176 7 chr2 66980186 66980597 -186275986 + L1MDa LINE L1 1559 2215 -4325 1847 103 4 0 chr2 66980598 66980840 -186275743 + AluSx SINE Alu 44 286 -26 22 35 0 0 chr2 66981332 66981361 -186275222 + AT_rich Low_complexity Low_complexity 1 29 0 39 22 0 0 chr2 66981867 66981913 -186274670 + AT_rich Low_complexity Low_complexity 1 46 0 253 167 157 20 chr2 66981913 66982015 -186274568 - MER113 DNA MER1_type? -274 247 132 1234 208 4 4 chr2 66983062 66983303 -186273280 + AluSx SINE Alu 45 285 -27 22 35 0 0 chr2 66983799 66983828 -186272755 + AT_rich Low_complexity Low_complexity 1 29 0 39 22 0 0 chr2 66984334 66984380 -186272203 + AT_rich Low_complexity Low_complexity 1 46 0 253 167 157 20 chr2 66984380 66984482 -186272101 - MER113 DNA MER1_type? -274 247 132 1746 134 34 75 chr2 66985373 66985693 -186270890 + AluJo SINE Alu 1 307 -5 23 0 0 0 chr2 66985998 66986021 -186270562 + AT_rich Low_complexity Low_complexity 1 23 0 540 194 147 50 chr2 66987051 66987244 -186269339 - MER20 DNA MER1_type -2 217 1 362 270 74 55 chr2 66987810 66987973 -186268610 - MIR SINE MIR -48 214 49 328 237 72 21 chr2 66987985 66988082 -186268501 - MIR SINE MIR -59 203 102 691 199 33 20 chr2 66988904 66989055 -186267528 - MIR SINE MIR -1 261 109 2765 134 26 36 chr2 66989100 66989594 -186266989 + Tigger1 DNA MER2_type 1 489 -1929 2182 96 7 3 chr2 66990192 66990485 -186266098 - AluY SINE Alu -17 294 1 21 0 0 0 chr2 66991125 66991146 -186265437 + AT_rich Low_complexity Low_complexity 1 21 0 2363 77 3 3 chr2 66993999 66994298 -186262285 + AluSp SINE Alu 1 299 -14 216 191 0 0 chr2 66994718 66994765 -186261818 + A-rich Low_complexity Low_complexity 1 47 0 270 242 44 137 chr2 66995215 66995397 -186261186 - MIR3 SINE MIR -2 206 42 4498 153 54 22 chr2 66995754 66996697 -186259886 + L1MB8 LINE L1 5200 6168 -10 1731 189 164 94 chr2 66997124 66997817 -186258766 - MER21B LTR ERV1 -109 754 13 1316 101 226 10 chr2 66998132 66998428 -186258155 + MER46B DNA MER2_type 1 235 -1 2256 94 0 3 chr2 66998549 66998837 -186257746 - AluSc SINE Alu -21 288 2 880 168 0 7 chr2 66999633 66999782 -186256801 + AluJo SINE Alu 1 148 -164 21 36 0 0 chr2 66999871 66999899 -186256684 + AT_rich Low_complexity Low_complexity 1 28 0 209 233 17 33 chr2 67000577 67000637 -186255946 - L2 LINE L2 0 3313 3255 512 246 73 0 chr2 67002562 67002672 -186253911 - FLAM_A SINE Alu -19 123 6 186 376 68 34 chr2 67002772 67002889 -186253694 + L2 LINE L2 2992 3112 -160 24 32 0 0 chr2 67003574 67003605 -186252978 + AT_rich Low_complexity Low_complexity 1 31 0 207 162 0 0 chr2 67003678 67003715 -186252868 + (TA)n Simple_repeat Simple_repeat 1 37 0 401 82 0 0 chr2 67003749 67003810 -186252773 + MER2 DNA MER2_type 152 212 -133 2174 113 3 10 chr2 67003993 67004293 -186252290 - AluSx SINE Alu -14 298 1 190 296 133 37 chr2 67004315 67004450 -186252133 - L2 LINE L2 -919 2395 2248 602 159 16 2 chr2 67004618 67004798 -186251785 + MER46A DNA MER2_type 1 226 -10 368 244 33 0 chr2 67005173 67005263 -186251320 + MER5A DNA MER1_type 12 104 -85 180 212 0 0 chr2 67005745 67005778 -186250805 - MIR3 SINE MIR -6 202 170 329 336 76 15 chr2 67005963 67006094 -186250489 - MIR3 SINE MIR -67 141 3 2099 122 7 3 chr2 67008995 67009298 -186247285 + AluSc SINE Alu 1 304 -5 330 294 0 28 chr2 67009892 67010001 -186246582 - MARNA DNA Mariner -69 517 412 516 268 68 27 chr2 67010112 67010332 -186246251 - MARNA DNA Mariner -282 304 76 575 282 17 107 chr2 67010376 67010476 -186246107 + L2 LINE L2 2802 2909 -404 762 183 15 0 chr2 67010476 67010607 -186245976 - FLAM_A SINE Alu 0 133 1 575 282 17 107 chr2 67010607 67010813 -186245770 + L2 LINE L2 2909 3074 -239 2003 150 3 0 chr2 67010817 67011124 -186245459 + AluSq SINE Alu 1 308 -5 988 212 119 26 chr2 67011231 67011651 -186244932 - L1MC5 LINE L1 -51 7910 7452 1679 147 55 46 chr2 67011659 67011966 -186244617 - AluJb SINE Alu -2 310 1 302 211 203 23 chr2 67011989 67012117 -186244466 + L2 LINE L2 3159 3309 -4 524 280 35 0 chr2 67012147 67012290 -186244293 - MER117 DNA MER1_type -49 148 1 22 56 0 0 chr2 67016368 67016404 -186240179 + GC_rich Low_complexity Low_complexity 1 36 0 373 344 105 52 chr2 67018264 67019024 -186237559 - L2 LINE L2 0 3272 2467 430 298 44 19 chr2 67019024 67019229 -186237354 - MLT1L LTR MaLR -2 609 377 393 353 67 13 chr2 67019629 67019867 -186236716 - L2 LINE L2 -1015 2299 2049 2338 223 93 91 chr2 67019872 67020543 -186236040 + L1MEc LINE L1 827 1495 -4901 2531 56 3 0 chr2 67020543 67020846 -186235737 - AluY SINE Alu -7 304 1 2338 223 93 91 chr2 67020846 67020929 -186235654 + L1MEc LINE L1 1495 1576 -4820 1878 151 3 7 chr2 67020929 67021227 -186235356 + AluJb SINE Alu 2 298 -14 2338 223 93 91 chr2 67021227 67021779 -186234804 + L1MEc LINE L1 1576 2137 -4259 413 246 59 0 chr2 67021789 67021907 -186234676 + MLT1J LTR MaLR 327 451 -60 31 0 0 0 chr2 67021907 67021938 -186234645 + AT_rich Low_complexity Low_complexity 1 31 0 872 120 8 0 chr2 67021938 67022055 -186234528 - FLAM_C SINE Alu -25 118 1 234 229 29 14 chr2 67022056 67022126 -186234457 + MLT1J LTR MaLR 429 499 -12 243 284 15 0 chr2 67022302 67022369 -186234214 + MIR SINE MIR 184 251 -11 255 61 0 0 chr2 67023195 67023228 -186233355 + (TG)n Simple_repeat Simple_repeat 2 34 0 189 245 0 20 chr2 67023712 67023761 -186232822 - L2 LINE L2 0 3313 3266 2291 84 3 10 chr2 67023797 67024096 -186232487 - AluSg SINE Alu -8 302 6 448 312 206 29 chr2 67024121 67024700 -186231883 - L2 LINE L2 -172 3100 2430 1387 176 109 11 chr2 67024865 67025132 -186231451 - AluJo SINE Alu -15 297 5 365 254 22 45 chr2 67025140 67025349 -186231234 - L1ME LINE L1 -723 5422 5219 436 294 51 54 chr2 67025391 67025707 -186230876 - L1ME LINE L1 -5555 564 250 577 232 83 43 chr2 67026880 67027156 -186229427 - L1MC5 LINE L1 -50 7911 7625 260 244 92 17 chr2 67027242 67027361 -186229222 - L1MC5 LINE L1 -44 7917 7790 597 236 198 8 chr2 67027419 67027661 -186228922 - L1ME2 LINE L1 -69 6095 5808 1658 214 77 3 chr2 67027690 67028055 -186228528 + MER82 DNA MER2_type 262 653 0 552 204 0 0 chr2 67028079 67028177 -186228406 + Tigger5 DNA MER2_type 1 98 -2225 2888 110 16 9 chr2 67028180 67028627 -186227956 + Tigger5 DNA MER2_type 1874 2323 0 1805 186 6 6 chr2 67031605 67031917 -186224666 + AluJb SINE Alu 1 312 0 739 279 130 0 chr2 67032205 67032420 -186224163 - MIR SINE MIR -8 254 12 1026 82 53 2 chr2 67032518 67032761 -186223822 + AluSg SINE Alu 1 303 -9 545 332 64 10 chr2 67032842 67033044 -186223539 - MIR SINE MIR -48 214 2 21 0 0 0 chr2 67033529 67033550 -186223033 + AT_rich Low_complexity Low_complexity 1 21 0 21 71 0 0 chr2 67033674 67033716 -186222867 + AT_rich Low_complexity Low_complexity 1 42 0 243 0 0 0 chr2 67034053 67034080 -186222503 + (TA)n Simple_repeat Simple_repeat 1 27 0 2389 91 3 0 chr2 67034080 67034387 -186222196 - AluSc SINE Alu -1 308 1 1963 112 7 0 chr2 67034472 67034741 -186221842 - AluY SINE Alu -15 296 26 2088 131 3 0 chr2 67034891 67035188 -186221395 - AluSx SINE Alu -14 298 1 22 35 0 0 chr2 67036023 67036052 -186220531 + AT_rich Low_complexity Low_complexity 1 29 0 234 0 0 0 chr2 67036052 67036078 -186220505 + (TTCC)n Simple_repeat Simple_repeat 3 28 0 2201 126 7 0 chr2 67036080 67036389 -186220194 - AluSx SINE Alu -1 311 1 1755 184 0 46 chr2 67036418 67036745 -186219838 + AluJb SINE Alu 1 312 0 23 54 0 0 chr2 67037775 67037812 -186218771 + AT_rich Low_complexity Low_complexity 1 37 0 2060 107 7 3 chr2 67037942 67038231 -186218352 + AluSc SINE Alu 1 290 -19 790 337 138 46 chr2 67038755 67038891 -186217692 + L2 LINE L2 1704 1826 -1488 1902 142 24 0 chr2 67038891 67039223 -186217360 - L1MB3 LINE L1 0 6183 5844 790 337 138 46 chr2 67039223 67040143 -186216440 + L2 LINE L2 1826 2857 -457 368 206 0 0 chr2 67040230 67040298 -186216285 + L2 LINE L2 2985 3052 -220 776 294 66 50 chr2 67040366 67040743 -186215840 + LTR16A LTR ERVL 55 437 -13 483 288 108 54 chr2 67041138 67041360 -186215223 + MIR SINE MIR 23 256 -6 361 336 27 7 chr2 67041798 67041947 -186214636 + MLT1I LTR MaLR 29 180 -229 180 0 0 0 chr2 67043421 67043441 -186213142 + (A)n Simple_repeat Simple_repeat 1 20 0 2160 136 32 6 chr2 67043724 67044063 -186212520 + MER7A DNA MER2_type 1 346 0 570 275 98 33 chr2 67044086 67044323 -186212260 + MIR SINE MIR 11 256 -6 435 286 175 6 chr2 67045032 67045203 -186211380 + MIR SINE MIR 2 201 -61 322 300 33 8 chr2 67045957 67046077 -186210506 + LTR67 LTR ERVL 435 557 0 293 192 60 18 chr2 67046957 67047124 -186209459 + (TA)n Simple_repeat Simple_repeat 1 174 0 30 0 0 0 chr2 67047142 67047172 -186209411 + AT_rich Low_complexity Low_complexity 1 30 0 345 314 6 29 chr2 67048347 67048519 -186208064 + CT-rich Low_complexity Low_complexity 1 168 0 301 291 36 36 chr2 67048521 67048631 -186207952 + MIR SINE MIR 1 110 -152 244 154 0 0 chr2 67048639 67048678 -186207905 - MLT2F LTR ERVL 0 663 625 1085 266 90 9 chr2 67048751 67049097 -186207486 - MLT2E LTR ERVL -209 419 46 457 190 16 50 chr2 67049160 67049281 -186207302 + MIR SINE MIR 137 253 -9 393 281 116 6 chr2 67049422 67049586 -186206997 - MIR SINE MIR 0 262 81 1038 156 9 38 chr2 67051911 67052122 -186204461 + MER3 DNA MER1_type 5 209 0 476 271 86 14 chr2 67052209 67052349 -186204234 - L2 LINE L2 0 3313 3164 201 195 0 0 chr2 67052805 67052846 -186203737 + (CACG)n Simple_repeat Simple_repeat 2 42 0 2378 87 0 3 chr2 67053307 67053605 -186202978 - AluY SINE Alu -14 297 1 2453 67 3 0 chr2 67054504 67054801 -186201782 - AluY SINE Alu -13 298 1 469 232 20 26 chr2 67054806 67054957 -186201626 - L1MC5 LINE L1 -36 7925 7776 531 159 88 18 chr2 67054959 67055072 -186201511 - MER6 DNA MER2_type 0 865 745 2558 128 132 0 chr2 67055072 67055558 -186201025 + L1PB4 LINE L1 5602 6151 -5 3990 164 32 15 chr2 67055566 67056316 -186200267 - MER6 DNA MER2_type -102 763 1 227 373 59 8 chr2 67056466 67056584 -186199999 + L2 LINE L2 3078 3201 -71 623 310 35 13 chr2 67056967 67057199 -186199384 + MIR SINE MIR 26 262 0 * 763 234 87 14 chr2 67057192 67057410 -186199173 - MIR SINE MIR 0 262 29 811 104 8 40 chr2 67057488 67057613 -186198970 + FLAM_C SINE Alu 6 126 -17 843 246 11 13 chr2 67059835 67060039 -186196544 + MIR SINE MIR 51 254 -8 855 148 124 18 chr2 67061972 67062141 -186194442 - MER5A DNA MER1_type 0 189 3 965 149 8 111 chr2 67062429 67062691 -186193892 - MER106A DNA MER1_type 0 236 2 253 342 67 40 chr2 67063994 67064143 -186192440 - MIR3 SINE MIR -22 186 34 1110 94 11 11 chr2 67064160 67064340 -186192243 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1152 148 0 45 chr2 67064346 67064548 -186192035 - AluJo SINE Alu -33 279 87 2472 82 3 0 chr2 67065905 67066209 -186190374 - AluSp SINE Alu -8 305 1 454 260 247 20 chr2 67066624 67066774 -186189809 + MLT1J2 LTR MaLR 201 384 -66 827 276 64 35 chr2 67066851 67067163 -186189420 + MLT1I LTR MaLR 72 392 -17 1342 148 5 14 chr2 67067365 67067575 -186189008 + AluJb SINE Alu 82 289 -23 24 0 0 0 chr2 67068175 67068199 -186188384 + AT_rich Low_complexity Low_complexity 1 24 0 1765 125 9 87 chr2 67069041 67069362 -186187221 + AluSx SINE Alu 2 297 -15 384 331 55 31 chr2 67070022 67070312 -186186271 + MARNA DNA Mariner 47 343 -243 576 293 30 0 chr2 67070332 67070465 -186186118 - L2 LINE L2 0 3272 3136 227 273 0 0 chr2 67070622 67070677 -186185906 + MARNA DNA Mariner 333 387 -199 2280 61 7 0 chr2 67070737 67071017 -186185566 - AluY SINE Alu -29 282 1 210 270 40 70 chr2 67071078 67071178 -186185405 - MIR3 SINE MIR -106 102 6 1995 137 17 3 chr2 67071611 67071904 -186184679 + AluSx SINE Alu 1 297 -15 402 246 42 25 chr2 67072703 67072821 -186183762 - MIR SINE MIR -44 218 99 2079 128 0 7 chr2 67073034 67073332 -186183251 - AluSx SINE Alu -15 297 2 837 157 0 0 chr2 67073332 67073453 -186183130 - AluSg/x SINE Alu -55 257 137 1838 132 0 107 chr2 67073480 67073806 -186182777 + AluSx SINE Alu 1 291 -11 421 299 60 0 chr2 67074415 67074532 -186182051 - L2 LINE L2 -1 3312 3189 621 214 32 0 chr2 67074543 67074669 -186181914 - MER94 DNA DNA -4 130 1 373 322 73 49 chr2 67077572 67077817 -186178766 - MIR SINE MIR -7 255 5 202 244 101 156 chr2 67078618 67078788 -186177795 - MIR SINE MIR -2 260 104 2494 42 0 0 chr2 67078788 67079100 -186177483 + AluY SINE Alu 1 312 0 202 244 101 156 chr2 67079100 67079166 -186177417 - MIR SINE MIR -158 104 36 904 189 34 23 chr2 67079968 67080274 -186176309 - MSTD LTR MaLR 0 396 1 1901 140 4 0 chr2 67080615 67080918 -186175665 - AluSx SINE Alu 0 306 3 2151 123 7 10 chr2 67082337 67082821 -186173762 - AluSx SINE Alu 0 312 1 3299 260 80 34 chr2 67083064 67083240 -186173343 + L2 LINE L2 1740 1906 -1407 1898 135 14 7 chr2 67083240 67083537 -186173046 - AluSx SINE Alu -13 299 1 3299 260 80 34 chr2 67083537 67084850 -186171733 + L2 LINE L2 1906 3312 -1 1490 191 22 44 chr2 67084913 67085035 -186171548 + AluJo SINE Alu 1 124 -188 218 54 0 27 chr2 67085035 67085072 -186171511 + (TAAAA)n Simple_repeat Simple_repeat 2 37 0 1490 191 22 44 chr2 67085072 67085264 -186171319 + AluJo SINE Alu 124 308 -4 213 39 0 0 chr2 67085438 67085464 -186171119 + (T)n Simple_repeat Simple_repeat 1 26 0 196 336 67 17 chr2 67086450 67086569 -186170014 + L2 LINE L2 3148 3272 0 1174 116 21 5 chr2 67087999 67088188 -186168395 + L1MA7 LINE L1 6099 6290 -1 454 196 22 123 chr2 67088244 67088306 -186168277 + MLT1J LTR MaLR 5 47 -464 2557 53 0 0 chr2 67088306 67088607 -186167976 - AluY SINE Alu -10 301 1 454 196 22 123 chr2 67088607 67088682 -186167901 + MLT1J LTR MaLR 47 128 -383 294 261 0 0 chr2 67088708 67088777 -186167806 + MLT1J LTR MaLR 241 309 -202 236 311 78 0 chr2 67088821 67088924 -186167659 + MLT1J LTR MaLR 401 511 0 2175 127 0 0 chr2 67089425 67089717 -186166866 - AluSx SINE Alu -20 292 1 280 359 62 16 chr2 67089810 67090066 -186166517 + MLT1K LTR MaLR 189 456 -132 802 190 19 0 chr2 67090114 67090272 -186166311 - MER58B DNA MER1_type 0 341 181 1729 173 10 29 chr2 67090799 67091106 -186165477 + AluJo SINE Alu 1 301 -11 292 271 118 14 chr2 67091183 67091327 -186165256 - MARNA DNA Mariner -11 575 417 2368 84 7 0 chr2 67091441 67091738 -186164845 - AluSp SINE Alu -14 299 1 211 312 168 8 chr2 67091786 67091911 -186164672 - L2 LINE L2 -1 3312 3168 23 54 0 0 chr2 67092160 67092197 -186164386 + AT_rich Low_complexity Low_complexity 1 37 0 420 216 45 45 chr2 67092560 67092671 -186163912 + L2 LINE L2 3203 3313 0 266 235 0 0 chr2 67094685 67094736 -186161847 - MER5A DNA MER1_type -98 91 41 1924 82 3 104 chr2 67094879 67095234 -186161349 + LTR7 LTR ERV1 130 448 -2 7076 95 14 60 chr2 67095236 67096400 -186160183 + HERVH LTR ERV1 1 1110 -6603 277 285 49 41 chr2 67097894 67098017 -186158566 + MIR3 SINE MIR 63 186 -22 595 279 0 0 chr2 67098091 67098231 -186158352 - MIR SINE MIR -115 147 8 2284 107 3 3 chr2 67098360 67098669 -186157914 + AluSx SINE Alu 1 309 -3 493 147 17 35 chr2 67099167 67099283 -186157300 + MER113 DNA MER1_type? 30 143 -378 719 205 48 6 chr2 67099288 67099454 -186157129 - L1M4 LINE L1 -1109 5037 4865 231 281 0 0 chr2 67099963 67100027 -186156556 + (CATATA)n Simple_repeat Simple_repeat 4 67 0 452 250 9 9 chr2 67100163 67100279 -186156304 + MER117 DNA MER1_type 30 145 -52 1091 333 118 11 chr2 67100324 67100951 -186155632 - L3 LINE CR1 -46 1531 838 488 261 94 7 chr2 67101015 67101153 -186155430 - MIR SINE MIR -93 169 20 2692 122 70 2 chr2 67101161 67101562 -186155021 + MSTA LTR MaLR 1 428 0 416 327 94 6 chr2 67101714 67101873 -186154710 - L3 LINE CR1 -1199 378 206 621 279 41 18 chr2 67103533 67103688 -186152895 + MIR SINE MIR 37 200 -62 1962 148 74 6 chr2 67103688 67104012 -186152571 - MER7A DNA MER2_type 0 346 3 621 279 41 18 chr2 67104012 67104075 -186152508 + MIR SINE MIR 200 260 -2 235 369 0 0 chr2 67104250 67104361 -186152222 + (CGGAG)n Simple_repeat Simple_repeat 5 115 0 266 230 185 62 chr2 67104862 67105238 -186151345 + MLT1I LTR MaLR 15 402 -7 339 299 164 37 chr2 67105378 67105702 -186150881 - L2 LINE L2 -862 2452 2088 448 69 35 0 chr2 67106242 67106300 -186150283 + AluSg/x SINE Alu 213 272 -37 2162 266 73 9 chr2 67106303 67106619 -186149964 - L2 LINE L2 -682 2632 2338 2422 83 3 0 chr2 67106619 67106920 -186149663 + AluSx SINE Alu 4 305 -7 2162 266 73 9 chr2 67106920 67107291 -186149292 - L2 LINE L2 -976 2338 1901 1733 122 0 93 chr2 67107291 67107631 -186148952 + AluSx SINE Alu 1 311 0 192 77 0 0 chr2 67108078 67108104 -186148479 + (GA)n Simple_repeat Simple_repeat 2 27 0 621 306 77 5 chr2 67108365 67108574 -186148009 - MIR SINE MIR -19 243 20 252 279 0 0 chr2 67108974 67109035 -186147548 - L2 LINE L2 0 3272 3212 2427 84 7 0 chr2 67109151 67109460 -186147123 - AluSp SINE Alu -2 311 1 2213 84 17 0 chr2 67110758 67111045 -186145538 + AluSx SINE Alu 1 292 -20 2262 112 0 0 chr2 67111045 67111341 -186145242 + AluSx SINE Alu 7 302 -10 2275 102 0 0 chr2 67111439 67111732 -186144851 - AluY SINE Alu -18 293 1 2171 123 0 0 chr2 67112655 67112948 -186143635 - AluSg SINE Alu -17 293 1 288 119 48 0 chr2 67113252 67113294 -186143289 - Alu SINE Alu -264 44 1 524 277 111 4 chr2 67113327 67113562 -186143021 + L1ME4a LINE L1 5653 5912 -209 1347 136 68 16 chr2 67114455 67114706 -186141877 + L1MD3 LINE L1 7730 7993 -2 27 29 0 0 chr2 67114969 67115003 -186141580 + AT_rich Low_complexity Low_complexity 1 34 0 9703 148 10 19 chr2 67115004 67117404 -186139179 - L1PA12 LINE L1 -15 6153 3777 346 172 293 0 chr2 67119273 67119372 -186137211 - Zaphod DNA AcHobo 0 4031 3904 1301 221 195 9 chr2 67119374 67119800 -186136783 - Zaphod DNA AcHobo -3523 508 4 1778 174 61 3 chr2 67120472 67120817 -186135766 - MER47A DNA MER2_type 0 366 2 461 250 62 58 chr2 67121420 67121680 -186134903 - MIR SINE MIR 0 262 2 1338 263 38 12 chr2 67122165 67122507 -186134076 - MER87 LTR ERV1 -23 518 168 4444 83 16 15 chr2 67123117 67123729 -186132854 + L1PA11 LINE L1 5562 6174 0 476 262 93 16 chr2 67123760 67123943 -186132640 + MIR SINE MIR 66 262 0 230 309 59 65 chr2 67124819 67124942 -186131641 + MIR SINE MIR 23 143 -67 231 250 33 0 chr2 67124949 67125009 -186131574 - L2 LINE L2 -1 3312 3251 1725 224 98 11 chr2 67125041 67125705 -186130878 - L2 LINE L2 -227 3086 2358 358 271 127 30 chr2 67127092 67127328 -186129255 - MER97c DNA MER1_type? -16 1074 816 3393 52 0 70 chr2 67127359 67127841 -186128742 + LTR7 LTR ERV1 1 448 -2 20983 92 12 7 chr2 67127843 67130817 -186125766 + HERVH LTR ERV1 1 2987 -4726 892 138 7 0 chr2 67130811 67130956 -186125627 + HERVH LTR ERV1 3140 3285 -4428 * 660 148 0 0 chr2 67130955 67131056 -186125527 + HERVH LTR ERV1 3544 3644 -4069 * 2555 165 7 0 chr2 67131055 67131462 -186125121 + HERVH LTR ERV1 4740 5149 -2564 1253 127 52 14 chr2 67131463 67131480 -186125103 + HERVH LTR ERV1 5600 5615 -2098 252 0 0 0 chr2 67131480 67131508 -186125075 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1253 127 52 14 chr2 67131508 67131702 -186124881 + HERVH LTR ERV1 5615 5819 -1894 * 2563 79 48 13 chr2 67131700 67132079 -186124504 + HERVH LTR ERV1 7322 7713 0 3739 38 0 4 chr2 67132079 67132529 -186124054 + LTR7 LTR ERV1 1 448 -2 1526 186 46 31 chr2 67132794 67133353 -186123230 - MER97b DNA MER1_type? -289 605 1 1817 175 0 0 chr2 67135096 67135387 -186121196 - AluJb SINE Alu -19 293 3 359 236 27 18 chr2 67135479 67135589 -186120994 + MIR3 SINE MIR 92 202 -6 215 331 40 34 chr2 67138123 67138272 -186118311 + MIR SINE MIR 40 188 -62 918 241 5 5 chr2 67139049 67139248 -186117335 - MER58A DNA MER1_type 0 224 26 3696 195 12 6 chr2 67140820 67141467 -186115116 + MER82 DNA MER2_type 2 652 -1 1813 192 12 6 chr2 67141482 67141816 -186114767 - MLT2C1 LTR ERVL -61 336 1 367 234 128 0 chr2 67142343 67142437 -186114146 + MER5A DNA MER1_type 4 109 -80 227 326 118 30 chr2 67143790 67143925 -186112658 + L2 LINE L2 2957 3103 -210 227 320 176 8 chr2 67143952 67144077 -186112506 + L2 LINE L2 3168 3313 0 2564 144 14 23 chr2 67144616 67145054 -186111529 + Tigger2a DNA MER2_type 1 434 0 2004 159 79 6 chr2 67145981 67146321 -186110262 + MLT1A1 LTR MaLR 1 365 0 2390 97 0 0 chr2 67146554 67146852 -186109731 + AluSc SINE Alu 1 298 -11 2294 102 0 7 chr2 67147389 67147693 -186108890 - AluSx SINE Alu -10 302 1 198 0 0 0 chr2 67148039 67148061 -186108522 + (TC)n Simple_repeat Simple_repeat 1 22 0 380 231 13 0 chr2 67149167 67149245 -186107338 + MER117 DNA MER1_type 11 89 -108 222 237 0 0 chr2 67149520 67149596 -186106987 + (TA)n Simple_repeat Simple_repeat 2 77 0 387 110 0 25 chr2 67150007 67150081 -186106502 - AluSq/x SINE Alu -154 149 93 67 55 0 0 chr2 67150087 67150196 -186106387 + AT_rich Low_complexity Low_complexity 1 109 0 1710 137 84 58 chr2 67150209 67150553 -186106030 - MLT1A2 LTR MaLR -21 353 1 2044 129 0 14 chr2 67151000 67151294 -186105289 - AluSx SINE Alu -22 290 1 1076 70 29 6 chr2 67152638 67152670 -186103913 + (TTTC)n Simple_repeat Simple_repeat 1 207 0 1076 70 29 6 chr2 67152670 67152841 -186103742 + (TTTC)n Simple_repeat Simple_repeat 1 175 0 298 109 79 0 chr2 67154416 67154517 -186102066 + (TA)n Simple_repeat Simple_repeat 2 110 0 26 50 0 0 chr2 67154583 67154623 -186101960 + AT_rich Low_complexity Low_complexity 1 40 0 2191 131 30 30 chr2 67154623 67154996 -186101587 - MLT2D LTR ERVL -41 373 1 22 0 0 0 chr2 67155481 67155503 -186101080 + AT_rich Low_complexity Low_complexity 1 22 0 1251 216 45 30 chr2 67156014 67156348 -186100235 - MER2 DNA MER2_type -5 340 2 22 0 0 0 chr2 67157083 67157105 -186099478 + AT_rich Low_complexity Low_complexity 1 22 0 870 325 105 22 chr2 67157979 67158609 -186097974 - L2 LINE L2 -407 2907 2226 196 236 115 68 chr2 67158687 67158835 -186097748 + L2 LINE L2 2995 3149 -164 617 325 81 22 chr2 67158921 67159377 -186097206 - L2 LINE L2 -1123 2191 1709 475 207 152 55 chr2 67160457 67160621 -186095962 - MER5A DNA MER1_type 0 189 10 435 259 7 52 chr2 67160812 67160947 -186095636 - MER5A DNA MER1_type -5 184 56 646 116 0 0 chr2 67160952 67161038 -186095545 - AluSg/x SINE Alu -31 281 196 190 247 27 27 chr2 67161038 67161111 -186095472 - MER5A DNA MER1_type -115 74 2 1744 160 14 0 chr2 67161521 67161815 -186094768 - L1PA16 LINE L1 -9 6157 5860 969 180 100 26 chr2 67162429 67162726 -186093857 - LTR37B LTR ERV1 -20 448 94 299 220 284 21 chr2 67163856 67163997 -186092586 - MER5A DNA MER1_type -3 186 9 891 190 11 17 chr2 67164015 67164194 -186092389 + MER5B DNA MER1_type 1 178 0 215 306 41 10 chr2 67164202 67164300 -186092283 - MER5B DNA MER1_type 0 178 78 396 103 0 0 chr2 67164341 67164399 -186092184 + (CA)n Simple_repeat Simple_repeat 1 58 0 308 183 110 37 chr2 67164446 67164528 -186092055 + MER5B DNA MER1_type 91 178 0 468 294 56 6 chr2 67164911 67165091 -186091492 - L2 LINE L2 -9 3304 3116 2187 102 10 3 chr2 67165319 67165612 -186090971 + AluSg1 SINE Alu 1 295 -14 441 302 23 23 chr2 67166797 67166969 -186089614 + MIR3 SINE MIR 34 205 -3 1095 154 0 0 chr2 67167039 67167201 -186089382 + AluJb SINE Alu 137 298 -14 288 238 0 16 chr2 67167362 67167425 -186089158 + MLT1K LTR MaLR 188 249 -339 879 304 70 44 chr2 67167450 67167857 -186088726 + MLT1K LTR MaLR 97 519 -69 2383 104 0 0 chr2 67167857 67168164 -186088419 - AluSx SINE Alu -5 307 1 879 304 70 44 chr2 67168164 67168230 -186088353 + MLT1K LTR MaLR 519 582 -6 2017 136 33 0 chr2 67168469 67168818 -186087765 - AluSx SINE Alu 0 359 1 232 250 0 0 chr2 67168818 67168834 -186087749 + T-rich Low_complexity Low_complexity 3 180 0 1169 135 0 0 chr2 67169129 67169299 -186087284 + FRAM SINE Alu 1 167 -9 196 229 0 0 chr2 67169587 67169635 -186086948 - L2 LINE L2 -3 3310 3263 398 229 39 72 chr2 67169735 67169888 -186086695 + L2 LINE L2 3162 3309 -4 493 264 24 0 chr2 67170315 67170440 -186086143 + MER91A DNA MER1_type 2 129 -67 414 234 27 12 chr2 67171510 67171658 -186084925 + MIR SINE MIR 6 150 -62 281 268 21 42 chr2 67173857 67173999 -186082584 + L1MEd LINE L1 40 178 -5941 933 281 69 42 chr2 67174116 67175025 -186081558 + L1M4 LINE L1 4458 5391 -755 541 293 101 75 chr2 67175038 67175413 -186081170 + MLT1I LTR MaLR 7 391 -18 602 210 77 35 chr2 67175432 67175575 -186081008 + MER5B DNA MER1_type 27 175 -3 2139 201 102 36 chr2 67175597 67176235 -186080348 + HAL1 LINE L1 1022 1701 -806 1088 119 49 0 chr2 67176220 67176405 -186080178 + L1MA8 LINE L1 6057 6250 -41 * 250 153 136 0 chr2 67176460 67176519 -186080064 - L1MA1 LINE L1 -27 6275 6209 * 388 111 0 14 chr2 67176496 67176568 -186080015 + L1MA9 LINE L1 6229 6291 0 501 270 232 7 chr2 67176578 67176871 -186079712 + HAL1 LINE L1 1690 2048 -459 1145 120 0 6 chr2 67176893 67177076 -186079507 - L1MA6 LINE L1 0 6300 6119 2201 165 6 0 chr2 67177081 67177421 -186079162 - MER7A DNA MER2_type -6 340 1 558 146 21 10 chr2 67177426 67177522 -186079061 - L1MA6 LINE L1 -178 6122 6026 12618 144 25 14 chr2 67177523 67179535 -186077048 - Ricksha_c DNA DNA 0 2046 13 4391 145 13 25 chr2 67179547 67180524 -186076059 - L1MA7 LINE L1 -266 6025 5059 716 236 53 85 chr2 67180529 67180906 -186075677 + HAL1 LINE L1 2036 2400 -107 578 265 60 51 chr2 67181360 67181575 -186075008 - MIR SINE MIR -44 218 2 186 43 0 0 chr2 67181584 67181607 -186074976 + (CA)n Simple_repeat Simple_repeat 2 24 0 424 301 214 7 chr2 67182758 67183034 -186073549 + L2 LINE L2 1720 2052 -1262 333 263 35 9 chr2 67183095 67183209 -186073374 + L2 LINE L2 3155 3271 -1 2083 100 3 36 chr2 67183324 67183625 -186072958 - AluSg SINE Alu -19 291 1 2240 105 3 3 chr2 67183935 67184231 -186072352 - AluSx SINE Alu -16 296 1 2475 77 0 0 chr2 67184737 67185034 -186071549 + AluSc SINE Alu 4 300 -9 582 252 133 21 chr2 67189602 67189836 -186066747 + MIR SINE MIR 3 262 0 1002 257 109 40 chr2 67191152 67191580 -186065003 - MLT1J LTR MaLR 0 511 45 1058 186 50 0 chr2 67191580 67191779 -186064804 - MER3 DNA MER1_type 0 209 1 1002 257 109 40 chr2 67191779 67191828 -186064755 - MLT1J LTR MaLR -466 45 1 183 237 17 34 chr2 67191963 67192022 -186064561 + MIR SINE MIR 199 256 -6 635 194 131 25 chr2 67193519 67193679 -186062904 - MER5B DNA MER1_type 0 178 2 1175 215 158 36 chr2 67194299 67194445 -186062138 - LTR16C LTR ERVL 0 491 364 2167 117 3 17 chr2 67194445 67194743 -186061840 + AluSx SINE Alu 1 294 -18 1175 215 158 36 chr2 67194743 67195034 -186061549 - LTR16C LTR ERVL -127 364 1 210 143 0 0 chr2 67195042 67195077 -186061506 + (TCCA)n Simple_repeat Simple_repeat 3 37 0 1472 199 97 30 chr2 67195620 67195991 -186060592 + MSTD LTR MaLR 1 396 0 228 247 25 62 chr2 67197843 67197924 -186058659 + MIR SINE MIR 117 194 -68 211 271 0 0 chr2 67198943 67199002 -186057581 - MIR SINE MIR -109 153 95 530 264 59 67 chr2 67199018 67199257 -186057326 + MIR SINE MIR 18 254 -8 394 286 24 16 chr2 67199595 67199721 -186056862 - L2 LINE L2 0 3272 3146 236 333 46 0 chr2 67200426 67200513 -186056070 + MIR SINE MIR 156 246 -16 366 141 16 0 chr2 67201653 67201717 -186054866 + MER5A DNA MER1_type 11 75 -114 2017 88 4 4 chr2 67201718 67201980 -186054603 + AluSc SINE Alu 1 262 -47 296 275 12 0 chr2 67202107 67202187 -186054396 - L2 LINE L2 0 3313 3233 246 220 0 0 chr2 67202602 67202652 -186053931 + GA-rich Low_complexity Low_complexity 1 50 0 379 304 58 7 chr2 67204352 67204490 -186052093 - MIR SINE MIR -62 146 20 256 339 25 25 chr2 67205125 67205243 -186051340 + MIR SINE MIR 8 125 -137 1044 176 35 10 chr2 67206918 67207117 -186049466 + MLT1A1 LTR MaLR 162 365 0 4619 110 8 76 chr2 67208027 67208748 -186047835 - MER4E LTR ERV1 0 766 105 2311 102 3 0 chr2 67208748 67209051 -186047532 + AluSx SINE Alu 7 310 -2 4619 110 8 76 chr2 67209051 67209149 -186047434 - MER4E LTR ERV1 -661 105 2 2112 138 80 5 chr2 67209424 67209800 -186046783 - L1MB3 LINE L1 -2 6181 5778 23 0 0 0 chr2 67209811 67209834 -186046749 + AT_rich Low_complexity Low_complexity 1 23 0 282 317 21 14 chr2 67209985 67210127 -186046456 - L1MC4a LINE L1 -1887 5921 5779 1540 202 21 3 chr2 67210134 67210461 -186046122 - MER58B DNA MER1_type -7 334 2 1393 262 94 53 chr2 67210464 67211461 -186045122 - L1MC4a LINE L1 -744 5402 4735 863 124 80 146 chr2 67211480 67211706 -186044877 - MER20 DNA MER1_type 0 219 9 222 309 218 34 chr2 67211752 67211868 -186044715 + L2 LINE L2 2920 3013 -259 2482 118 13 11 chr2 67211868 67212242 -186044341 - THE1C LTR MaLR 0 375 1 222 309 218 34 chr2 67212242 67212423 -186044160 + L2 LINE L2 3013 3272 0 198 200 0 0 chr2 67212558 67212593 -186043990 - MIR SINE MIR -8 254 220 183 311 0 0 chr2 67212560 67212605 -186043978 - L2 LINE L2 -16 3256 3212 * 543 260 199 5 chr2 67212746 67212942 -186043641 + MIR SINE MIR 17 250 -12 807 138 0 0 chr2 67213358 67213474 -186043109 + FLAM_C SINE Alu 1 116 -27 30 0 0 0 chr2 67213474 67213504 -186043079 + AT_rich Low_complexity Low_complexity 1 30 0 427 189 11 33 chr2 67214560 67214650 -186041933 + MER103 DNA DNA 14 101 -65 298 234 78 0 chr2 67214949 67215026 -186041557 - L2 LINE L2 0 3313 3231 641 266 105 96 chr2 67215276 67216009 -186040574 - L2 LINE L2 -541 2773 2034 204 276 158 53 chr2 67216186 67216432 -186040151 + L2 LINE L2 2621 2892 -422 481 226 67 102 chr2 67216470 67216753 -186039830 + LTR33A LTR ERVL 8 280 -243 561 119 0 24 chr2 67216810 67216894 -186039689 + MLT1C LTR MaLR 1 82 -385 633 141 14 14 chr2 67216998 67217140 -186039443 + (CCA)n Simple_repeat Simple_repeat 1 142 0 219 69 0 0 chr2 67217171 67217200 -186039383 + (CCA)n Simple_repeat Simple_repeat 2 30 0 839 264 4 58 chr2 67217232 67217490 -186039093 - MIR SINE MIR -7 255 12 255 301 102 28 chr2 67217539 67217715 -186038868 + MLT1J LTR MaLR 180 368 -143 709 187 8 15 chr2 67218383 67218517 -186038066 - FLAM_C SINE Alu 0 133 1 313 263 98 8 chr2 67218690 67218823 -186037760 + MIR SINE MIR 91 235 -27 1348 216 43 41 chr2 67218972 67219190 -186037393 + L1ME3A LINE L1 5764 5985 -185 2271 103 0 3 chr2 67219190 67219490 -186037093 + AluSg SINE Alu 1 299 -11 1348 216 43 41 chr2 67219490 67219664 -186036919 + L1ME3A LINE L1 5985 6157 -13 375 273 0 27 chr2 67220536 67220646 -186035937 - MLT1K LTR MaLR -303 285 179 302 191 44 0 chr2 67220871 67220939 -186035644 + MIR SINE MIR 91 161 -101 680 289 83 46 chr2 67221350 67221700 -186034883 + MLT1K LTR MaLR 144 506 -82 229 206 120 43 chr2 67221727 67221819 -186034764 + MLT1K LTR MaLR 490 588 0 978 264 29 24 chr2 67222201 67222461 -186034122 - MIR SINE MIR 0 262 1 192 296 69 63 chr2 67223073 67223255 -186033328 + L2 LINE L2 1783 1965 -1349 606 276 54 35 chr2 67223255 67223458 -186033125 + MIR SINE MIR 2 208 -54 474 288 57 44 chr2 67224120 67224349 -186032234 - L1MEd LINE L1 -5541 578 347 309 173 49 25 chr2 67224382 67224463 -186032120 + HsTC2 DNA Tc2 1814 1896 -2 215 256 199 19 chr2 67224466 67224622 -186031961 + L2 LINE L2 2694 2877 -437 241 130 22 0 chr2 67225120 67225166 -186031417 - L1MD3 LINE L1 -11 7984 7938 1958 127 0 38 chr2 67225193 67225508 -186031075 - AluSx SINE Alu -8 304 2 2009 102 0 24 chr2 67226075 67226397 -186030186 - AluSq SINE Alu 0 315 1 1516 112 0 101 chr2 67226652 67226919 -186029664 + AluSx SINE Alu 50 289 -23 679 203 114 30 chr2 67227254 67227280 -186029303 + L1MC4 LINE L1 6450 6472 -1570 3144 107 17 4 chr2 67227280 67227739 -186028844 + MER4C LTR ERV1 1 465 0 679 203 114 30 chr2 67227739 67227914 -186028669 + L1MC4 LINE L1 6472 6668 -1374 7366 229 66 19 chr2 67227923 67229259 -186027324 - L1ME LINE L1 -351 5813 4542 1437 220 0 7 chr2 67229259 67229559 -186027024 + AluJo SINE Alu 5 302 -10 7366 229 66 19 chr2 67229559 67229919 -186026664 - L1ME LINE L1 -1622 4542 4201 2075 106 0 0 chr2 67229919 67230228 -186026355 - AluSx SINE Alu 0 310 2 7366 229 66 19 chr2 67230228 67231451 -186025132 - L1ME LINE L1 -1963 4201 2750 336 311 132 67 chr2 67233292 67233610 -186022973 + L2 LINE L2 2909 3252 -20 1940 169 30 0 chr2 67233610 67233947 -186022636 - MER7A DNA MER2_type 0 346 2 336 311 132 67 chr2 67233947 67233969 -186022614 + L2 LINE L2 3252 3271 -1 575 212 223 26 chr2 67234006 67234199 -186022384 - MIR SINE MIR -30 232 2 484 271 38 0 chr2 67234434 67234567 -186022016 + LTR33 LTR ERVL 383 520 -1 1893 136 0 35 chr2 67234830 67235140 -186021443 + AluSx SINE Alu 1 299 -13 521 237 76 47 chr2 67235469 67235680 -186020903 + MLT1K LTR MaLR 370 586 -2 684 237 130 85 chr2 67235828 67236339 -186020244 + LTR33A LTR ERVL 9 523 0 215 224 20 0 chr2 67236816 67236865 -186019718 - L2 LINE L2 0 3313 3264 587 175 0 10 chr2 67237431 67237528 -186019055 - Tigger7 DNA MER2_type -5 2582 2487 1228 212 18 55 chr2 67237529 67237803 -186018780 - Tigger7 DNA MER2_type -469 264 1 338 227 47 99 chr2 67237803 67237975 -186018608 + L1ME4a LINE L1 5782 5944 -177 242 160 20 0 chr2 67238519 67238569 -186018014 + (TG)n Simple_repeat Simple_repeat 2 52 0 462 287 71 51 chr2 67238951 67239190 -186017393 - MIR SINE MIR -4 258 4 948 109 63 6 chr2 67240322 67240497 -186016086 - MER96B DNA MER1_type? -43 374 190 21 71 0 0 chr2 67240654 67240696 -186015887 + AT_rich Low_complexity Low_complexity 1 42 0 1522 156 64 28 chr2 67240804 67241086 -186015497 + AluJb SINE Alu 1 292 -20 19326 137 25 13 chr2 67241617 67244548 -186012035 + L1M1 LINE L1 13 2985 -4580 2308 57 40 0 chr2 67244548 67244845 -186011738 + AluY SINE Alu 1 309 -2 19326 137 25 13 chr2 67244845 67244936 -186011647 + L1M1 LINE L1 2985 3073 -4492 1742 102 29 0 chr2 67244940 67245215 -186011368 + L1MA2 LINE L1 6022 6304 0 524 305 210 24 chr2 67247478 67248202 -186008381 + L2 LINE L2 1493 2351 -963 324 0 0 0 chr2 67248303 67248339 -186008244 + (TG)n Simple_repeat Simple_repeat 1 36 0 830 225 17 12 chr2 67248927 67249100 -186007483 - MER5B DNA MER1_type 0 178 5 357 287 165 0 chr2 67249246 67249361 -186007222 + L2 LINE L2 3139 3272 0 231 204 0 0 chr2 67250326 67250370 -186006213 + (TG)n Simple_repeat Simple_repeat 2 45 0 721 281 72 0 chr2 67251480 67251715 -186004868 - MIR SINE MIR 0 262 11 669 250 125 19 chr2 67252268 67252532 -186004051 + LTR16A1 LTR ERVL 162 453 -4 246 62 0 0 chr2 67253290 67253322 -186003261 + (CA)n Simple_repeat Simple_repeat 2 33 0 587 319 6 32 chr2 67254055 67254212 -186002371 + MER91A DNA MER1_type 1 153 -43 1780 216 96 21 chr2 67255348 67256109 -186000474 + L1MC4 LINE L1 6772 7758 -284 1969 138 131 16 chr2 67256109 67256492 -186000091 - MSTA LTR MaLR 0 428 2 1780 216 96 21 chr2 67256492 67256611 -185999972 + L1MC4 LINE L1 7758 7867 -175 304 180 225 34 chr2 67256895 67256984 -185999599 + L2 LINE L2 3208 3313 0 452 289 93 63 chr2 67257188 67257586 -185998997 - MLT1J LTR MaLR -2 509 100 662 328 153 10 chr2 67257671 67258077 -185998506 + L3 LINE CR1 1102 1565 -12 2135 102 24 0 chr2 67259697 67259992 -185996591 - AluSx SINE Alu -10 302 1 1443 182 128 30 chr2 67261560 67261966 -185994617 - L1ME2 LINE L1 0 6164 5719 1775 134 34 3 chr2 67261968 67262259 -185994324 - AluSx SINE Alu -12 300 1 21 0 0 0 chr2 67263408 67263429 -185993154 + AT_rich Low_complexity Low_complexity 1 21 0 458 234 195 0 chr2 67263620 67263748 -185992835 - L2 LINE L2 -1 3312 3160 1163 127 81 5 chr2 67263767 67263964 -185992619 + AluSq SINE Alu 100 311 -2 1337 226 45 166 chr2 67263981 67264524 -185992059 - L2 LINE L2 -199 3114 2608 421 222 34 34 chr2 67264524 67264641 -185991942 - MER104 DNA Tc2 -59 121 5 1337 226 45 166 chr2 67264641 67265008 -185991575 - L2 LINE L2 -705 2608 2198 739 315 56 25 chr2 67265157 67265513 -185991070 - LTR16C LTR ERVL 0 491 125 231 290 210 27 chr2 67267340 67267526 -185989057 - L3 LINE CR1 -27 1550 1331 304 383 114 0 chr2 67268059 67268208 -185988375 + L2 LINE L2 3102 3267 -5 2119 96 7 10 chr2 67268481 67268782 -185987801 + AluSx SINE Alu 1 300 -12 343 256 96 56 chr2 67269160 67269285 -185987298 - MIR3 SINE MIR -45 163 34 281 342 105 38 chr2 67270116 67270487 -185986096 + L2 LINE L2 2827 3222 -50 438 214 68 10 chr2 67270809 67270912 -185985671 + MIR SINE MIR 79 187 -75 2152 95 0 49 chr2 67271090 67271394 -185985189 - AluSx SINE Alu -1 311 23 379 254 65 23 chr2 67271528 67271738 -185984845 + MLT1I LTR MaLR 2 187 -222 2669 130 59 9 chr2 67271739 67272178 -185984405 + L1MB3 LINE L1 5722 6182 -1 342 123 0 0 chr2 67272182 67272239 -185984344 + (GGA)n Simple_repeat Simple_repeat 2 58 0 608 273 54 25 chr2 67272245 67272467 -185984116 + MLT1J2 LTR MaLR 206 443 -7 225 0 0 0 chr2 67275167 67275192 -185981391 + (TG)n Simple_repeat Simple_repeat 2 26 0 1151 183 40 119 chr2 67275386 67275905 -185980678 - Charlie2 DNA MER1_type 0 2862 2385 263 286 61 0 chr2 67275937 67276035 -185980548 - Charlie2 DNA MER1_type -902 1960 1857 2560 131 177 55 chr2 67276463 67277012 -185979571 - LTR35 LTR ERV1 -2 616 1 1710 164 29 146 chr2 67278113 67278559 -185978024 + MER66B LTR ERV1 1 373 -113 278 50 25 0 chr2 67278559 67278599 -185977984 + (TAA)n Simple_repeat Simple_repeat 2 42 0 1710 164 29 146 chr2 67278599 67278702 -185977881 + MER66B LTR ERV1 373 486 0 185 239 0 22 chr2 67278742 67278788 -185977795 - L2 LINE L2 -64 3249 3205 213 341 87 0 chr2 67279393 67279519 -185977064 - L2 LINE L2 -4 3268 3132 724 131 66 5 chr2 67280279 67281192 -185975391 + L1MA4A LINE L1 5107 6280 -23 2529 107 22 0 chr2 67281820 67282176 -185974407 + THE1B LTR MaLR 1 364 0 297 0 0 0 chr2 67283003 67283036 -185973547 + (CA)n Simple_repeat Simple_repeat 2 34 0 189 0 0 0 chr2 67283035 67283056 -185973527 + (GA)n Simple_repeat Simple_repeat 2 22 0 * 1097 304 51 33 chr2 67283142 67283534 -185973049 - LTR16C LTR ERVL -8 483 85 207 337 11 33 chr2 67284018 67284110 -185972473 + L2 LINE L2 1209 1298 -2016 1115 309 71 9 chr2 67284114 67284551 -185972032 + LTR16B LTR ERVL 1 464 0 1506 293 158 18 chr2 67284551 67285641 -185970942 + L2 LINE L2 1298 2539 -775 964 136 57 28 chr2 67285658 67285834 -185970749 - MLT1B LTR MaLR -186 204 24 550 315 126 21 chr2 67285871 67286495 -185970088 + L2 LINE L2 2616 3313 0 551 328 39 0 chr2 67286799 67287028 -185969555 + MIR SINE MIR 25 262 0 727 245 22 11 chr2 67288036 67288220 -185968363 + L1ME LINE L1 5637 5822 -340 1865 239 26 75 chr2 67288273 67288787 -185967796 + MLT1E LTR MaLR 52 537 -56 1714 137 27 0 chr2 67288787 67289043 -185967540 + AluJb SINE Alu 1 263 -49 1865 239 26 75 chr2 67289043 67289098 -185967485 + MLT1E LTR MaLR 537 593 0 23 0 0 0 chr2 67289144 67289167 -185967416 + AT_rich Low_complexity Low_complexity 1 23 0 275 219 110 0 chr2 67289228 67289301 -185967282 - HAL1 LINE L1 -295 2212 2132 673 192 0 8 chr2 67289370 67289490 -185967093 - MLT1C LTR MaLR 0 467 349 467 179 47 0 chr2 67290395 67290501 -185966082 + MER69 DNA AcHobo 4 114 -2412 1693 164 89 17 chr2 67290524 67290872 -185965711 - MLT1A2 LTR MaLR 0 374 2 1441 251 93 8 chr2 67290973 67291360 -185965223 + MER69 DNA AcHobo 149 568 -658 * 2007 182 42 61 chr2 67291358 67291784 -185964799 + MER69 DNA AcHobo 2010 2426 -100 2027 142 0 0 chr2 67291784 67292066 -185964517 - AluSx SINE Alu -30 282 1 2007 182 42 61 chr2 67292066 67292162 -185964421 + MER69 DNA AcHobo 2426 2522 -4 567 243 41 18 chr2 67292304 67292473 -185964110 - MIR3 SINE MIR -15 193 21 266 252 133 30 chr2 67292640 67292775 -185963808 + MER5A DNA MER1_type 9 157 -32 * 322 250 103 9 chr2 67292662 67292778 -185963805 - MER5A DNA MER1_type -22 167 41 2579 190 91 56 chr2 67294783 67295408 -185961175 - MLT1E1 LTR MaLR -5 649 3 2078 227 46 28 chr2 67295652 67296150 -185960433 + MLT1G1 LTR MaLR 51 557 -38 252 0 0 0 chr2 67297307 67297335 -185959248 + (CA)n Simple_repeat Simple_repeat 2 29 0 2161 161 36 18 chr2 67298376 67298762 -185957821 + MSTB LTR MaLR 1 393 -33 2379 80 0 0 chr2 67298788 67299075 -185957508 - AluY SINE Alu -24 287 1 243 154 0 0 chr2 67299075 67299114 -185957469 + MSTB LTR MaLR 394 432 0 203 213 0 0 chr2 67299456 67299503 -185957080 + MIR SINE MIR 103 149 -113 180 243 0 0 chr2 67299544 67299581 -185957002 + L2 LINE L2 3268 3304 -9 9987 203 51 34 chr2 67299879 67300461 -185956122 - L1MDa LINE L1 -528 6108 5537 1433 125 161 4 chr2 67300461 67300709 -185955874 - AluJb SINE Alu -14 288 2 9987 203 51 34 chr2 67300709 67301136 -185955447 - L1MDa LINE L1 -1099 5537 5118 2442 61 0 7 chr2 67301136 67301432 -185955151 - AluY SINE Alu -16 295 2 9987 203 51 34 chr2 67301432 67303492 -185953091 - L1MDa LINE L1 -1518 5118 3093 2196 111 13 3 chr2 67303492 67303790 -185952793 - AluSg SINE Alu -9 301 1 9987 203 51 34 chr2 67303790 67304525 -185952058 - L1MDa LINE L1 -3543 3093 2372 2400 111 0 0 chr2 67304525 67304831 -185951752 - AluSq SINE Alu -7 306 1 9987 203 51 34 chr2 67304831 67306342 -185950241 - L1MDa LINE L1 -4264 2372 698 293 309 0 12 chr2 67306349 67306430 -185950153 - MIR SINE MIR -169 93 14 2379 88 3 0 chr2 67306556 67306851 -185949732 - AluSc SINE Alu -13 296 1 1172 294 105 14 chr2 67307200 67307629 -185948954 + LTR33 LTR ERVL 1 468 -53 241 229 101 46 chr2 67308015 67308124 -185948459 + L1ME LINE L1 5549 5663 -458 1484 175 50 7 chr2 67308467 67308747 -185947836 - AluJo SINE Alu -18 294 3 335 245 28 9 chr2 67308945 67309051 -185947532 - MIR SINE MIR -115 147 40 306 316 133 41 chr2 67309227 67309686 -185946897 + L2 LINE L2 2127 2627 -687 246 208 0 0 chr2 67309738 67309791 -185946792 + (CA)n Simple_repeat Simple_repeat 1 53 0 288 255 75 38 chr2 67309792 67309898 -185946685 + MER5B DNA MER1_type 63 172 -6 1988 144 0 23 chr2 67310809 67311114 -185945469 + AluJb SINE Alu 1 298 -14 250 220 140 20 chr2 67311409 67311509 -185945074 - MLT1L LTR MaLR -13 602 491 343 298 50 31 chr2 67311675 67311836 -185944747 - MLT1J LTR MaLR -340 171 8 234 331 73 29 chr2 67312983 67313119 -185943464 + L1MC/D LINE L1 5495 5636 -2172 332 159 0 0 chr2 67313318 67313381 -185943202 - L1MA5 LINE L1 0 6300 6238 * 1483 102 9 5 chr2 67313379 67313594 -185942989 + L1M2 LINE L1 5410 5625 -672 1669 166 3 28 chr2 67314798 67315108 -185941475 + AluJo SINE Alu 3 305 0 2417 75 3 3 chr2 67315132 67315424 -185941159 + AluSx SINE Alu 1 292 -20 911 185 58 11 chr2 67316173 67316362 -185940221 + MIR SINE MIR 1 198 -64 365 282 34 78 chr2 67316368 67316574 -185940009 + LTR16A LTR ERVL 6 202 -248 240 301 126 10 chr2 67316627 67316730 -185939853 + LTR16A LTR ERVL 331 445 -5 217 219 0 0 chr2 67316740 67316781 -185939802 + MIR SINE MIR 201 241 -21 206 171 24 0 chr2 67317282 67317323 -185939260 + (TTCA)n Simple_repeat Simple_repeat 1 42 0 771 279 35 16 chr2 67317487 67317854 -185938729 - L2 LINE L2 -251 3062 2687 2054 136 3 13 chr2 67317855 67318156 -185938427 + AluSx SINE Alu 3 300 -12 211 54 54 0 chr2 67319268 67319305 -185937278 + A-rich Low_complexity Low_complexity 2 40 0 6915 96 4 17 chr2 67319311 67320320 -185936263 + L1MA4A LINE L1 5308 6303 0 333 0 0 0 chr2 67320362 67320399 -185936184 + (CA)n Simple_repeat Simple_repeat 1 37 0 450 244 141 70 chr2 67322681 67322980 -185933603 - LTR49 LTR ERV1 -9 586 267 897 143 186 0 chr2 67323030 67323191 -185933392 - MER34C LTR ERV1 -391 194 4 776 196 129 41 chr2 67323191 67323381 -185933202 + MER20 DNA MER1_type 13 219 0 241 281 126 37 chr2 67324720 67324855 -185931728 - MIR3 SINE MIR -23 185 39 * 426 280 51 55 chr2 67324847 67325083 -185931500 + L2 LINE L2 2553 2787 -527 774 243 191 10 chr2 67325151 67325325 -185931258 + L2 LINE L2 2927 3068 -245 1859 159 0 16 chr2 67325325 67325634 -185930949 - AluJo SINE Alu -8 304 1 774 243 191 10 chr2 67325634 67325768 -185930815 + L2 LINE L2 3068 3291 -22 772 199 73 48 chr2 67325776 67325982 -185930601 - MIR SINE MIR -16 246 36 802 46 0 28 chr2 67326411 67326519 -185930064 + AluSg/x SINE Alu 202 306 -3 228 235 25 0 chr2 67327694 67327775 -185928808 + (CG)n Simple_repeat Simple_repeat 2 84 0 22 35 0 0 chr2 67328179 67328208 -185928375 + GC_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 67329220 67329241 -185927342 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 67330096 67330119 -185926464 + AT_rich Low_complexity Low_complexity 1 23 0 1807 161 17 3 chr2 67330441 67330732 -185925851 + AluJo SINE Alu 6 300 -12 254 163 0 0 chr2 67331073 67331116 -185925467 - L1MC3 LINE L1 -269 7516 7474 472 154 33 22 chr2 67331393 67331484 -185925099 + MER5A DNA MER1_type 98 189 0 269 26 0 26 chr2 67332166 67332205 -185924378 + (TTTTTG)n Simple_repeat Simple_repeat 3 40 0 27 0 0 0 chr2 67334323 67334350 -185922233 + AT_rich Low_complexity Low_complexity 1 27 0 1266 229 99 23 chr2 67334880 67335265 -185921318 - L1ME1 LINE L1 -4 6162 5749 201 69 0 0 chr2 67335795 67335824 -185920759 - L2 LINE L2 -1 3312 3284 230 243 0 33 chr2 67335914 67335981 -185920602 - MER5A DNA MER1_type -74 115 40 1342 215 40 4 chr2 67335983 67336286 -185920297 + AluJb SINE Alu 1 313 0 3681 129 6 4 chr2 67338868 67339394 -185917189 - MER1A DNA MER1_type 0 527 1 1655 165 10 31 chr2 67339779 67340070 -185916513 + AluJo SINE Alu 5 289 -23 850 209 80 5 chr2 67340442 67340490 -185916093 + MER3 DNA MER1_type 1 62 -147 252 299 115 13 chr2 67340490 67340647 -185915936 - MER3 DNA MER1_type 0 209 37 432 314 138 29 chr2 67341802 67342016 -185914567 + L2 LINE L2 3008 3252 -20 741 149 0 71 chr2 67342016 67342157 -185914426 + FLAM_C SINE Alu 2 132 -1 432 314 138 29 chr2 67342157 67342181 -185914402 + L2 LINE L2 3252 3272 0 1913 215 113 26 chr2 67342196 67342690 -185913893 - MLT1F LTR MaLR -1 541 5 404 198 16 83 chr2 67343274 67343395 -185913188 - Charlie8 DNA MER1_type -2197 220 108 440 258 73 27 chr2 67343972 67344152 -185912431 + MIR SINE MIR 5 192 -63 185 278 19 0 chr2 67344263 67344317 -185912266 - MIR SINE MIR -56 152 98 475 271 41 0 chr2 67345588 67345710 -185910873 - MIR SINE MIR -65 143 17 441 54 0 0 chr2 67345945 67346001 -185910582 + (TATG)n Simple_repeat Simple_repeat 3 58 0 765 142 18 0 chr2 67346001 67346114 -185910469 - FLAM_C SINE Alu -27 116 2 693 207 50 28 chr2 67347070 67347249 -185909334 - MLT1I LTR MaLR -18 391 209 236 193 63 72 chr2 67347392 67347501 -185909082 + MIR SINE MIR 37 145 -63 901 259 80 17 chr2 67348115 67348416 -185908167 + L1ME4a LINE L1 5513 5832 -289 1774 176 33 0 chr2 67348487 67348789 -185907794 - AluJb SINE Alu 0 312 1 2220 115 0 0 chr2 67350061 67350357 -185906226 - AluSx SINE Alu -16 296 1 376 307 50 22 chr2 67350405 67350584 -185905999 - HAL1 LINE L1 -2091 416 233 595 226 134 51 chr2 67350585 67350802 -185905781 - MLT1J2 LTR MaLR 0 450 216 985 236 8 48 chr2 67351081 67351331 -185905252 - MLT1J2 LTR MaLR -207 243 4 1049 230 5 9 chr2 67351404 67351626 -185904957 + MER58A DNA MER1_type 1 221 -3 784 199 31 61 chr2 67352767 67352963 -185903620 + LTR18B LTR ERVL 1 190 -424 * 1538 133 144 11 chr2 67352961 67353224 -185903359 + LTR18B LTR ERVL 317 614 0 466 186 115 9 chr2 67353355 67353468 -185903115 + L2 LINE L2 3186 3310 -3 390 201 96 34 chr2 67353549 67353676 -185902907 - L1ME2 LINE L1 -7 6327 6032 771 291 62 0 chr2 67354330 67354571 -185902012 + MIR SINE MIR 6 261 -1 216 0 0 0 chr2 67354948 67354972 -185901611 + (TG)n Simple_repeat Simple_repeat 1 24 0 1739 158 29 4 chr2 67354981 67355260 -185901323 - AluJb SINE Alu -26 286 1 397 333 27 16 chr2 67356473 67356659 -185899924 + MIR SINE MIR 59 246 -16 1938 234 102 19 chr2 67356914 67357456 -185899127 - MLT1E LTR MaLR 0 593 7 531 244 104 118 chr2 67357567 67357791 -185898792 + MLT1K LTR MaLR 149 366 -222 2098 151 0 0 chr2 67357791 67358103 -185898480 + AluSx SINE Alu 1 312 0 531 244 104 118 chr2 67358103 67358320 -185898263 + MLT1K LTR MaLR 366 584 -4 237 333 11 0 chr2 67358320 67358407 -185898176 + MIR3 SINE MIR 114 201 -7 642 211 11 84 chr2 67358795 67358985 -185897598 + MIR SINE MIR 54 229 -33 306 0 0 0 chr2 67361438 67361472 -185895111 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 398 254 181 0 chr2 67362155 67362293 -185894290 + MER5A DNA MER1_type 1 163 -26 21 0 0 0 chr2 67363071 67363092 -185893491 + AT_rich Low_complexity Low_complexity 1 21 0 432 146 0 0 chr2 67363649 67363733 -185892850 + (CA)n Simple_repeat Simple_repeat 1 87 -9 225 0 0 0 chr2 67363733 67363758 -185892825 + (TC)n Simple_repeat Simple_repeat 1 25 0 432 146 0 0 chr2 67363758 67363769 -185892814 + (CA)n Simple_repeat Simple_repeat 86 96 0 443 215 47 0 chr2 67364149 67364256 -185892327 + MIR SINE MIR 35 146 -116 523 280 82 73 chr2 67364259 67364278 -185892305 - L2 LINE L2 -6 3307 3290 2338 95 0 3 chr2 67364278 67364574 -185892009 + AluSg SINE Alu 1 295 -15 523 280 82 73 chr2 67364574 67364908 -185891675 - L2 LINE L2 -23 3290 2951 292 284 0 32 chr2 67365725 67365820 -185890763 - MIR3 SINE MIR -6 202 111 265 165 103 82 chr2 67365871 67365968 -185890615 - MLT1K LTR MaLR -28 560 462 1080 285 42 33 chr2 67366306 67366734 -185889849 - L2 LINE L2 0 3313 2882 504 193 21 179 chr2 67366769 67367054 -185889529 + MER102a DNA MER1_type 78 317 -13 797 265 40 87 chr2 67367070 67367448 -185889135 - MLT1I LTR MaLR -10 399 40 603 303 19 5 chr2 67367638 67367846 -185888737 + MIR SINE MIR 6 216 -46 1956 94 0 0 chr2 67367903 67368147 -185888436 + AluSx SINE Alu 59 302 -10 3498 212 63 6 chr2 67369218 67370021 -185886562 - L1MC4 LINE L1 -57 7985 7137 186 43 0 0 chr2 67371133 67371156 -185885427 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2002 110 37 4 chr2 67371158 67371430 -185885153 - AluSc SINE Alu -28 281 1 934 201 24 0 chr2 67371430 67371599 -185884984 - FAM SINE Alu -2 173 1 4661 101 2 5 chr2 67372123 67372735 -185883848 - MER4B LTR ERV1 0 610 1 2073 127 75 113 chr2 67373301 67373742 -185882841 - MSTB LTR MaLR -2 424 1 2202 104 3 3 chr2 67374962 67375260 -185881323 - AluSq SINE Alu -15 298 1 310 219 30 95 chr2 67375775 67375855 -185880728 + L1MC4a LINE L1 5705 5770 -2038 2337 66 7 0 chr2 67375855 67376144 -185880439 + AluY SINE Alu 1 291 -20 310 219 30 95 chr2 67376144 67376232 -185880351 + L1MC4a LINE L1 5770 5862 -1946 22 35 0 0 chr2 67376288 67376317 -185880266 + AT_rich Low_complexity Low_complexity 1 29 0 1479 104 80 0 chr2 67377466 67377678 -185878905 + AluSq SINE Alu 1 229 -84 942 264 155 12 chr2 67378083 67378484 -185878099 - LTR33A LTR ERVL 0 523 66 261 0 0 0 chr2 67379490 67379519 -185877064 + (TAA)n Simple_repeat Simple_repeat 2 30 0 318 287 125 45 chr2 67379822 67380181 -185876402 + L1ME4a LINE L1 5602 5989 -132 875 176 13 31 chr2 67380196 67380355 -185876228 + FRAM SINE Alu 1 156 -10 32 57 0 0 chr2 67380510 67380563 -185876020 + AT_rich Low_complexity Low_complexity 1 53 0 377 303 85 3 chr2 67381162 67381387 -185875196 - L1ME3A LINE L1 -287 5883 5662 1828 152 35 29 chr2 67381499 67381809 -185874774 - AluSx SINE Alu 0 312 1 533 219 225 7 chr2 67382095 67382246 -185874337 + MER5A DNA MER1_type 6 189 0 2143 51 0 0 chr2 67382428 67382682 -185873901 + AluY SINE Alu 57 310 -1 262 322 165 0 chr2 67382684 67382799 -185873784 - L2 LINE L2 -191 3081 2948 288 340 33 33 chr2 67383820 67383973 -185872610 - MIR SINE MIR -3 259 107 182 347 129 24 chr2 67383997 67384121 -185872462 + L2 LINE L2 3136 3272 0 226 373 63 32 chr2 67384163 67384289 -185872294 - MER5B DNA MER1_type -1 177 48 6330 68 37 53 chr2 67384310 67386296 -185870287 - SVA Other Other -518 1386 57 486 0 0 0 chr2 67386296 67386350 -185870233 + (GGGAGA)n Simple_repeat Simple_repeat 1 54 0 241 291 62 134 chr2 67386875 67387150 -185869433 - L2 LINE L2 -1 3271 3017 1247 303 60 14 chr2 67387185 67387618 -185868965 - LTR67 LTR ERVL 0 557 105 1108 268 105 33 chr2 67387629 67388114 -185868469 - MLT1H1 LTR MaLR -9 546 27 237 216 11 102 chr2 67388201 67388289 -185868294 - LTR67 LTR ERVL -476 81 2 198 250 47 0 chr2 67388297 67388361 -185868222 - L2 LINE L2 -337 2977 2911 272 259 245 19 chr2 67388696 67388908 -185867675 - L1MC4 LINE L1 0 8042 7783 216 336 146 18 chr2 67389249 67389359 -185867224 - L2 LINE L2 0 3272 3149 687 257 106 47 chr2 67389435 67389902 -185866681 - L1MC5 LINE L1 -219 7823 7289 914 193 14 76 chr2 67390588 67390811 -185865772 - MER20 DNA MER1_type -6 213 5 263 263 50 12 chr2 67390891 67390971 -185865612 - MIR SINE MIR -56 206 124 1322 147 0 5 chr2 67391124 67391328 -185865255 - AluJb SINE Alu -23 289 87 251 263 75 81 chr2 67391953 67392113 -185864470 + L2 LINE L2 3110 3268 -4 2087 119 0 0 chr2 67392252 67392573 -185864010 + AluSq SINE Alu 1 321 0 443 243 18 18 chr2 67392632 67392743 -185863840 - L2 LINE L2 -2 3311 3201 646 127 17 0 chr2 67392835 67392953 -185863630 - Charlie5 DNA MER1_type 0 2624 2505 357 233 11 11 chr2 67393324 67393414 -185863169 - MLT1A2 LTR MaLR -75 299 210 1875 135 29 0 chr2 67393951 67394252 -185862331 - AluJb SINE Alu 0 309 1 1774 164 0 4 chr2 67394301 67394615 -185861968 + AluJb SINE Alu 9 321 0 310 302 83 0 chr2 67394852 67394948 -185861635 - MIR SINE MIR -58 150 47 398 296 102 19 chr2 67395102 67395318 -185861265 + L1ME LINE L1 5495 5728 -393 353 83 0 0 chr2 67395814 67395862 -185860721 - Alu SINE Alu -12 290 243 27 73 0 0 chr2 67399547 67399602 -185856981 + AT_rich Low_complexity Low_complexity 1 55 0 754 181 34 34 chr2 67399885 67400062 -185856521 - MIR SINE MIR -24 238 62 2353 94 3 0 chr2 67400396 67400695 -185855888 + AluSp SINE Alu 1 300 -13 472 274 8 0 chr2 67401382 67401499 -185855084 - L2 LINE L2 -1 3271 3154 844 268 53 56 chr2 67401736 67402150 -185854433 - L2 LINE L2 -357 2957 2545 21 0 0 0 chr2 67402647 67402668 -185853915 + AT_rich Low_complexity Low_complexity 1 21 0 1360 155 0 5 chr2 67402731 67402944 -185853639 - AluJo SINE Alu -16 296 85 2075 130 0 7 chr2 67402969 67403270 -185853313 + AluSx SINE Alu 1 299 -13 197 175 25 0 chr2 67403628 67403668 -185852915 + L2 LINE L2 3263 3303 -10 250 263 61 18 chr2 67403672 67403786 -185852797 - L1ME4a LINE L1 -68 6053 5935 390 277 40 65 chr2 67403811 67403877 -185852706 - L1ME4a LINE L1 -237 5884 5818 2458 89 0 0 chr2 67403877 67404179 -185852404 + AluSx SINE Alu 1 302 -10 390 277 40 65 chr2 67404179 67404390 -185852193 - L1ME4a LINE L1 -303 5818 5614 1102 161 207 0 chr2 67404689 67404965 -185851618 + MER33 DNA MER1_type 1 320 -4 227 306 246 40 chr2 67405193 67405921 -185850662 - L2 LINE L2 -243 3070 2163 1907 167 0 16 chr2 67406213 67406525 -185850058 + AluJb SINE Alu 1 307 -5 223 230 68 40 chr2 67408351 67408425 -185848158 - MER5B DNA MER1_type 0 178 103 289 333 183 11 chr2 67408583 67408763 -185847820 + MIR SINE MIR 48 258 -4 2037 110 26 29 chr2 67409381 67409690 -185846893 + AluSx SINE Alu 1 308 -4 1897 174 3 0 chr2 67409768 67410079 -185846504 + AluJb SINE Alu 1 312 0 302 249 196 54 chr2 67410104 67410335 -185846248 - L1MC4a LINE L1 -238 5883 5601 1589 77 0 14 chr2 67410335 67410544 -185846039 + L1PA15 LINE L1 5959 6164 -1 302 249 196 54 chr2 67410544 67410630 -185845953 - L1MC4a LINE L1 -520 5601 5529 736 193 119 9 chr2 67411069 67411287 -185845296 - MER112 DNA MER1_type -11 249 8 234 292 77 0 chr2 67412777 67412842 -185843741 - L2 LINE L2 -50 3222 3153 429 270 26 7 chr2 67412859 67413011 -185843572 - L2 LINE L2 -1417 1897 1743 240 86 0 0 chr2 67413025 67413060 -185843523 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 501 247 84 22 chr2 67414144 67414322 -185842261 + MIR SINE MIR 70 258 -4 1654 253 62 16 chr2 67415999 67416766 -185839817 - L1ME LINE L1 -517 5653 4857 339 183 0 0 chr2 67416771 67416831 -185839752 - L1ME LINE L1 -1391 4755 4696 1067 168 0 0 chr2 67418308 67418481 -185838102 + L1MC/D LINE L1 5542 5714 -645 548 192 139 6 chr2 67418498 67418676 -185837907 + L1MC/D LINE L1 5629 5821 -334 567 279 0 0 chr2 67419292 67419450 -185837133 + L1MD2 LINE L1 5548 5705 -654 880 205 80 113 chr2 67419548 67419947 -185836636 + L1MD2 LINE L1 5710 6151 -50 216 67 0 0 chr2 67419948 67419978 -185836605 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2297 85 0 0 chr2 67419983 67420266 -185836317 - AluSx SINE Alu -29 283 1 253 81 0 0 chr2 67420339 67420376 -185836207 + L1MB3 LINE L1 6140 6176 -7 2408 198 77 45 chr2 67420695 67420826 -185835757 - L1MC4 LINE L1 -133 7909 7784 2300 53 0 50 chr2 67420826 67421128 -185835455 + AluY SINE Alu 1 287 -24 216 0 0 0 chr2 67421128 67421152 -185835431 + (CATA)n Simple_repeat Simple_repeat 2 25 0 2408 198 77 45 chr2 67421152 67421670 -185834913 - L1MC4 LINE L1 -257 7785 7238 755 200 46 0 chr2 67421671 67421846 -185834737 - L1MC4 LINE L1 -954 7088 6906 1992 118 3 35 chr2 67421851 67422164 -185834419 - AluJb SINE Alu -9 303 1 2946 9 0 0 chr2 67422185 67422503 -185834080 + AluYb8 SINE Alu 1 318 0 285 250 0 0 chr2 67422532 67422592 -185833991 - L1ME LINE L1 -305 5816 5757 335 198 22 66 chr2 67422640 67422731 -185833852 - L1ME LINE L1 -541 5580 5494 294 231 130 46 chr2 67423097 67423205 -185833378 + MIR3 SINE MIR 71 187 -21 2196 119 0 0 chr2 67423382 67423675 -185832908 - AluSx SINE Alu 0 312 20 2217 205 99 57 chr2 67424068 67424328 -185832255 + L1MD2 LINE L1 5565 5813 -546 743 160 56 0 chr2 67424328 67424453 -185832130 + FLAM_A SINE Alu 2 133 0 2217 205 99 57 chr2 67424453 67424751 -185831832 + L1MD2 LINE L1 5813 6166 -193 486 0 0 0 chr2 67424751 67424805 -185831778 + (CA)n Simple_repeat Simple_repeat 1 54 0 2217 205 99 57 chr2 67424805 67425006 -185831577 + L1MD2 LINE L1 6166 6357 -2 262 326 116 29 chr2 67429065 67429237 -185827346 + MIR SINE MIR 5 191 -71 2010 131 0 0 chr2 67429352 67429627 -185826956 + AluSx SINE Alu 1 275 -37 396 0 0 0 chr2 67429629 67429673 -185826910 + (CA)n Simple_repeat Simple_repeat 1 44 0 2320 94 0 0 chr2 67430063 67430361 -185826222 - AluSx SINE Alu -14 298 1 981 108 14 0 chr2 67431559 67431698 -185824885 - AluSg/x SINE Alu -16 294 154 4618 158 55 8 chr2 67432340 67433164 -185823419 - MER6 DNA MER2_type -3 862 1 1631 197 39 109 chr2 67433303 67433787 -185822796 - MLT2B1 LTR ERVL 0 520 79 1743 186 3 0 chr2 67433787 67434077 -185822506 - AluJb SINE Alu -21 291 1 1631 197 39 109 chr2 67434077 67434151 -185822432 - MLT2B1 LTR ERVL -441 79 1 25 0 0 0 chr2 67434450 67434475 -185822108 + AT_rich Low_complexity Low_complexity 1 25 0 2164 139 0 0 chr2 67434664 67434966 -185821617 + AluSx SINE Alu 1 302 -10 1631 190 10 17 chr2 67435468 67435768 -185820815 + AluJo SINE Alu 1 298 -14 436 309 85 20 chr2 67436065 67436266 -185820317 + MIR SINE MIR 20 233 -29 239 224 153 24 chr2 67436443 67436528 -185820055 - L2 LINE L2 -27 3286 3191 955 275 21 0 chr2 67436554 67436790 -185819793 + MIR SINE MIR 1 241 -21 1573 99 0 18 chr2 67437757 67437979 -185818604 - AluSg SINE Alu -92 218 1 1168 168 0 0 chr2 67438527 67438717 -185817866 + AluSg/x SINE Alu 123 312 0 2223 111 0 3 chr2 67438914 67439212 -185817371 - AluSx SINE Alu -15 297 1 2376 84 7 0 chr2 67439269 67439567 -185817016 + AluY SINE Alu 1 300 -11 427 213 64 0 chr2 67439677 67439771 -185816812 + MER58A DNA MER1_type 9 108 0 319 194 15 15 chr2 67439771 67439827 -185816756 + MER58A DNA MER1_type 169 224 0 193 290 145 16 chr2 67441284 67441408 -185815175 + MIR SINE MIR 89 228 -34 1657 115 24 24 chr2 67441875 67442128 -185814455 + AluSx SINE Alu 44 296 -16 418 281 237 5 chr2 67442194 67442418 -185814165 - HAL1 LINE L1 -185 2322 2047 387 149 0 30 chr2 67442560 67442627 -185813956 - HAL1 LINE L1 -784 1723 1659 2124 71 42 7 chr2 67442702 67442985 -185813598 - AluSx SINE Alu -19 293 1 926 186 16 36 chr2 67445261 67445454 -185811129 - MER5A DNA MER1_type 0 189 1 198 0 0 0 chr2 67445763 67445785 -185810798 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 2304 99 0 13 chr2 67446007 67446310 -185810273 + AluSq SINE Alu 1 299 -14 487 157 12 0 chr2 67446807 67446890 -185809693 + FLAM_A SINE Alu 47 130 -12 221 281 0 0 chr2 67447148 67447205 -185809378 + (TA)n Simple_repeat Simple_repeat 2 58 0 416 313 9 0 chr2 67447354 67447469 -185809114 + MIR3 SINE MIR 83 198 -10 204 125 0 0 chr2 67447506 67447538 -185809045 + (A)n Simple_repeat Simple_repeat 1 32 0 2101 125 10 0 chr2 67447739 67448028 -185808555 - AluSx SINE Alu -20 292 1 356 220 140 47 chr2 67448400 67448550 -185808033 - MER103 DNA DNA -1 165 2 1726 178 32 0 chr2 67449420 67449701 -185806882 + AluJo SINE Alu 4 293 -19 414 57 0 0 chr2 67449763 67449816 -185806767 + (TG)n Simple_repeat Simple_repeat 2 54 0 2178 117 0 0 chr2 67449821 67450112 -185806471 - AluSx SINE Alu -21 291 1 396 0 0 0 chr2 67450148 67450192 -185806391 + (CA)n Simple_repeat Simple_repeat 2 45 0 335 145 14 0 chr2 67450229 67450298 -185806285 + (TA)n Simple_repeat Simple_repeat 1 70 0 385 233 145 87 chr2 67450776 67450831 -185805752 - MIR3 SINE MIR -8 200 150 2324 100 3 3 chr2 67450831 67451132 -185805451 - AluSq SINE Alu -12 301 1 385 233 145 87 chr2 67451132 67451248 -185805335 - MIR3 SINE MIR -58 150 19 612 167 49 14 chr2 67451827 67451971 -185804612 - L1MD2 LINE L1 -17 6342 6194 414 174 161 39 chr2 67451972 67452127 -185804456 - L1MD2 LINE L1 -218 6141 5968 2216 81 10 17 chr2 67452632 67452930 -185803653 - AluSg SINE Alu -14 296 1 387 155 24 12 chr2 67452966 67453050 -185803533 + U6 snRNA snRNA 2 86 -21 2543 60 0 0 chr2 67458667 67458969 -185797614 - AluY SINE Alu -9 302 1 4235 151 66 21 chr2 67462031 67462823 -185793760 - L1MB7 LINE L1 -16 6168 5283 816 141 7 22 chr2 67462823 67462958 -185793625 - FLAM_C SINE Alu 0 133 1 4235 151 66 21 chr2 67462958 67463407 -185793176 - L1MB7 LINE L1 -901 5283 4856 22 0 0 0 chr2 67463670 67463692 -185792891 + AT_rich Low_complexity Low_complexity 1 22 0 388 266 51 47 chr2 67464182 67464456 -185792127 - L1MC5 LINE L1 -385 7576 7302 318 321 120 5 chr2 67464478 67464662 -185791921 - L1MC4a LINE L1 -458 7350 7146 180 0 0 0 chr2 67466189 67466209 -185790374 + (A)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr2 67466559 67466580 -185790003 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 67467055 67467083 -185789500 + AT_rich Low_complexity Low_complexity 1 28 0 377 270 161 12 chr2 67467892 67468068 -185788515 + MIR SINE MIR 47 254 -8 292 122 20 0 chr2 67468882 67468931 -185787652 - MLT1J LTR MaLR 0 511 462 500 209 78 13 chr2 67468946 67469099 -185787484 + MER104 DNA Tc2 18 180 0 1136 286 81 5 chr2 67469099 67469529 -185787054 - MLT1J LTR MaLR -48 463 1 347 265 88 48 chr2 67469760 67469907 -185786676 + MIR3 SINE MIR 20 172 -36 246 354 40 0 chr2 67470148 67470247 -185786336 - MIR SINE MIR -69 139 37 1064 273 165 54 chr2 67470280 67470396 -185786187 - L3 LINE CR1 -74 1503 1401 363 44 0 0 chr2 67470396 67470441 -185786142 + (CA)n Simple_repeat Simple_repeat 1 45 0 1064 273 165 54 chr2 67470441 67471105 -185785478 - L3 LINE CR1 -176 1401 636 238 271 104 0 chr2 67471159 67471255 -185785328 - L3 LINE CR1 -1076 501 396 786 155 0 63 chr2 67471310 67471420 -185785163 + FLAM_A SINE Alu 1 102 -200 2248 101 3 0 chr2 67471420 67471717 -185784866 - AluSg SINE Alu -12 298 1 786 155 0 63 chr2 67471717 67471748 -185784835 + FLAM_A SINE Alu 102 133 -169 1965 140 0 0 chr2 67472481 67472801 -185783782 - AluSx SINE Alu 0 320 1 390 254 159 40 chr2 67473492 67473693 -185782890 - MIR SINE MIR -11 251 27 286 241 103 26 chr2 67473776 67473892 -185782691 + L2 LINE L2 3136 3260 -12 890 131 0 0 chr2 67474646 67474768 -185781815 + AluJo/FLAM SINE Alu 3 124 -188 2092 141 0 3 chr2 67474771 67475061 -185781522 - AluSx SINE Alu -23 289 1 25 0 0 0 chr2 67475064 67475089 -185781494 + AT_rich Low_complexity Low_complexity 1 25 0 1991 194 17 3 chr2 67476520 67476880 -185779703 - MLT1A1 LTR MaLR 0 365 1 295 193 18 0 chr2 67476929 67476986 -185779597 + MIR SINE MIR 205 262 0 227 170 85 0 chr2 67477445 67477492 -185779091 - L2 LINE L2 0 3313 3263 526 297 64 47 chr2 67477644 67477958 -185778625 - L1MC4 LINE L1 -131 7911 7587 2266 129 11 22 chr2 67477958 67478323 -185778260 - L1PA16 LINE L1 0 6166 5806 526 297 64 47 chr2 67478323 67478416 -185778167 - L1MC4 LINE L1 -455 7587 7497 571 313 118 15 chr2 67478589 67478921 -185777662 + L2 LINE L2 2946 3311 -2 754 260 108 14 chr2 67479943 67480166 -185776417 - MIR SINE MIR 0 262 19 304 274 118 0 chr2 67480183 67480285 -185776298 - MIR SINE MIR -64 198 85 214 256 0 0 chr2 67481554 67481597 -185774986 + (CA)n Simple_repeat Simple_repeat 2 44 0 431 276 37 8 chr2 67482383 67482517 -185774066 - MIR3 SINE MIR -24 184 47 716 194 8 15 chr2 67482523 67482657 -185773926 + FLAM_A SINE Alu 1 133 0 2609 52 7 7 chr2 67482658 67482965 -185773618 + AluSx SINE Alu 1 307 -5 185 0 40 0 chr2 67482972 67482997 -185773586 + (GGAA)n Simple_repeat Simple_repeat 2 27 0 21 36 0 0 chr2 67483520 67483548 -185773035 + GC_rich Low_complexity Low_complexity 1 28 0 320 279 104 26 chr2 67483732 67483886 -185772697 + MER5A DNA MER1_type 20 185 -4 23 68 0 0 chr2 67484470 67484514 -185772069 + AT_rich Low_complexity Low_complexity 1 44 0 249 192 19 0 chr2 67484957 67485009 -185771574 + L1ME LINE L1 5617 5669 -452 1995 99 35 14 chr2 67485030 67485332 -185771251 + AluSx SINE Alu 1 312 0 676 273 87 15 chr2 67485333 67485664 -185770919 + HAL1b LINE L1 1194 1341 -7 224 280 130 63 chr2 67485667 67485874 -185770709 - L2 LINE L2 -8 3264 3044 528 237 118 38 chr2 67485919 67486116 -185770467 + MIR SINE MIR 33 252 -10 2155 90 35 10 chr2 67486374 67486662 -185769921 + AluSp SINE Alu 4 298 -15 269 144 18 0 chr2 67486803 67486859 -185769724 - MIR SINE MIR -36 172 114 442 207 24 193 chr2 67487727 67487940 -185768643 - MER5B DNA MER1_type 0 178 2 462 261 15 6 chr2 67487951 67488132 -185768451 + L1ME4a LINE L1 5281 5467 -849 402 319 12 0 chr2 67488352 67488518 -185768065 + L1ME4a LINE L1 5721 5888 -233 341 320 55 50 chr2 67488609 67488661 -185767922 + L1ME4a LINE L1 5939 5989 -132 1522 179 6 78 chr2 67488661 67488980 -185767603 + AluJo SINE Alu 1 296 -16 341 320 55 50 chr2 67488980 67489108 -185767475 + L1ME4a LINE L1 5989 6120 -1 46 19 0 0 chr2 67489108 67489161 -185767422 + AT_rich Low_complexity Low_complexity 1 53 0 706 274 23 16 chr2 67489402 67489632 -185766951 + MIR SINE MIR 20 250 -12 414 0 0 0 chr2 67491115 67491161 -185765422 + (CA)n Simple_repeat Simple_repeat 2 47 0 199 337 75 48 chr2 67492172 67492359 -185764224 - L2 LINE L2 -87 3185 2994 380 305 94 17 chr2 67492899 67492993 -185763590 - L2 LINE L2 -86 3227 3142 1566 94 0 102 chr2 67492993 67493093 -185763490 - MER30 DNA MER1_type 0 230 121 2196 122 0 3 chr2 67493093 67493389 -185763194 - AluSx SINE Alu -17 295 1 1566 94 0 102 chr2 67493389 67493544 -185763039 - MER30 DNA MER1_type -109 121 1 380 305 94 17 chr2 67493544 67493682 -185762901 - L2 LINE L2 -171 3142 2977 1380 240 26 3 chr2 67494006 67494385 -185762198 + L1MC2 LINE L1 4362 4749 -1397 726 180 78 0 chr2 67494397 67494525 -185762058 + FRAM SINE Alu 19 156 -20 4547 153 57 3 chr2 67494526 67495649 -185760934 + L1MC2 LINE L1 4990 6164 -180 1435 167 29 4 chr2 67495658 67495931 -185760652 + AluJo SINE Alu 33 311 0 480 178 30 117 chr2 67495931 67496005 -185760578 + L1MC2 LINE L1 6165 6244 -100 2221 110 0 16 chr2 67496005 67496315 -185760268 + AluSg SINE Alu 1 305 -5 480 178 30 117 chr2 67496315 67496437 -185760146 + L1MC2 LINE L1 6244 6344 0 290 343 28 0 chr2 67496991 67497099 -185759484 + MIR SINE MIR 141 251 -11 697 237 94 138 chr2 67497231 67497859 -185758724 - L2 LINE L2 -3 3310 2701 2334 99 0 0 chr2 67497859 67498162 -185758421 - AluSx SINE Alu -9 303 1 697 237 94 138 chr2 67498162 67498426 -185758157 - L2 LINE L2 -612 2701 2427 261 275 64 55 chr2 67498870 67498979 -185757604 + MIR SINE MIR 54 163 -99 748 180 0 14 chr2 67499178 67499317 -185757266 + FLAM_A SINE Alu 6 142 0 342 285 8 0 chr2 67499871 67499994 -185756589 + GA-rich Low_complexity Low_complexity 2 125 0 804 189 85 0 chr2 67500135 67500288 -185756295 + FRAM SINE Alu 1 166 0 2369 92 0 20 chr2 67500772 67501076 -185755507 + AluSg SINE Alu 1 298 -12 314 164 27 118 chr2 67501948 67502058 -185754525 - MIR SINE MIR -84 124 25 685 242 91 5 chr2 67502244 67502442 -185754141 + MIR SINE MIR 36 250 -12 194 271 57 43 chr2 67502692 67502762 -185753821 + MIR SINE MIR 23 93 -115 * 636 268 134 13 chr2 67502753 67502977 -185753606 - MIR SINE MIR -7 255 5 311 286 30 89 chr2 67502933 67503101 -185753482 + MIR3 SINE MIR 40 197 -11 * 1116 243 9 0 chr2 67503308 67503530 -185753053 - MER58A DNA MER1_type 0 224 1 335 194 48 0 chr2 67503941 67504003 -185752580 - L2 LINE L2 -5 3308 3244 2157 174 91 5 chr2 67504253 67504683 -185751900 - MLT1C LTR MaLR 0 467 1 237 278 126 39 chr2 67505298 67505553 -185751030 - L2 LINE L2 -1025 2289 2013 189 74 0 0 chr2 67508173 67508200 -185748383 + (CAA)n Simple_repeat Simple_repeat 1 27 0 31 0 0 0 chr2 67508208 67508239 -185748344 + AT_rich Low_complexity Low_complexity 1 31 0 186 171 0 0 chr2 67509186 67509227 -185747356 + (TG)n Simple_repeat Simple_repeat 2 42 0 347 330 0 60 chr2 67511913 67512098 -185744485 - L3b LINE CR1 -257 1326 1153 854 235 109 10 chr2 67513262 67513556 -185743027 + MER5C DNA MER1_type 2 324 0 442 308 63 7 chr2 67515510 67515653 -185740930 + L2 LINE L2 3121 3271 -1 680 271 65 0 chr2 67515920 67516090 -185740493 - MER5A DNA MER1_type -6 183 3 22 35 0 0 chr2 67516570 67516599 -185739984 + AT_rich Low_complexity Low_complexity 1 29 0 2383 60 7 0 chr2 67517661 67517973 -185738610 + AluY SINE Alu 2 315 0 427 265 9 90 chr2 67520168 67520379 -185736204 + L1MC5 LINE L1 7741 7934 -27 21 71 0 0 chr2 67524328 67524370 -185732213 + AT_rich Low_complexity Low_complexity 1 42 0 474 252 135 107 chr2 67527365 67527794 -185728789 + L1M2 LINE L1 766 1206 -5643 210 180 0 0 chr2 67528036 67528097 -185728486 + (CCCCG)n Simple_repeat Simple_repeat 5 65 0 32 0 0 0 chr2 67528120 67528152 -185728431 + GC_rich Low_complexity Low_complexity 1 32 0 1539 192 39 4 chr2 67530459 67530740 -185725843 + AluJo SINE Alu 1 291 -21 218 328 61 22 chr2 67532452 67532632 -185723951 + MIR3 SINE MIR 21 207 -1 2378 79 3 7 chr2 67532956 67533260 -185723323 - AluSp SINE Alu -10 303 1 220 270 9 96 chr2 67533263 67533378 -185723205 - MIR SINE MIR -50 212 108 241 213 66 33 chr2 67533800 67533861 -185722722 + L2 LINE L2 3188 3250 -22 22 0 0 0 chr2 67534220 67534242 -185722341 + AT_rich Low_complexity Low_complexity 1 22 0 1560 82 0 5 chr2 67534242 67534438 -185722145 + AluSq SINE Alu 110 304 -9 207 0 0 0 chr2 67535202 67535225 -185721358 + (CA)n Simple_repeat Simple_repeat 2 24 0 1915 126 0 7 chr2 67535238 67535509 -185721074 + AluSx SINE Alu 1 269 -43 830 277 92 37 chr2 67536503 67536902 -185719681 + L1MC/D LINE L1 4488 4929 -1217 1413 167 67 43 chr2 67536902 67537032 -185719551 + AluJo SINE Alu 1 126 -186 2115 96 0 11 chr2 67537032 67537344 -185719239 + AluSg SINE Alu 1 309 0 1413 167 67 43 chr2 67537344 67537494 -185719089 + AluJo SINE Alu 126 289 -23 830 277 92 37 chr2 67537494 67537660 -185718923 + L1MC/D LINE L1 4929 5084 -1062 919 327 93 13 chr2 67537684 67538134 -185718449 + LTR33 LTR ERVL 30 515 -6 312 258 159 29 chr2 67538148 67538452 -185718131 + L1MC/D LINE L1 5101 5428 -743 774 122 24 8 chr2 67538460 67538583 -185718000 + AluJo SINE Alu 10 134 -178 366 259 40 99 chr2 67538585 67538743 -185717840 + L1MC/D LINE L1 5429 5574 -596 1828 153 27 3 chr2 67538743 67539043 -185717540 - AluJb SINE Alu -5 307 1 366 259 40 99 chr2 67539043 67539085 -185717498 + L1MC/D LINE L1 5574 5617 -553 698 195 37 55 chr2 67539123 67539186 -185717397 - MER105 DNA DNA -42 162 99 783 200 70 35 chr2 67539186 67539386 -185717197 + MER63A DNA MER1_type 3 209 -1 698 195 37 55 chr2 67539386 67539486 -185717097 - MER105 DNA DNA -105 99 2 256 208 0 0 chr2 67539551 67539599 -185716984 + L1MC/D LINE L1 5702 5749 -2059 467 281 141 5 chr2 67542238 67542437 -185714146 + L2 LINE L2 1892 2117 -1197 668 277 105 70 chr2 67542672 67542842 -185713741 + L2 LINE L2 2113 2276 -1038 580 274 0 7 chr2 67542842 67542977 -185713606 - MER94 DNA DNA 0 134 1 668 277 105 70 chr2 67542977 67543351 -185713232 + L2 LINE L2 2276 2676 -638 181 340 19 0 chr2 67543354 67543407 -185713176 - L2 LINE L2 -31 3241 3188 30 69 0 0 chr2 67543910 67543968 -185712615 + AT_rich Low_complexity Low_complexity 1 58 0 458 315 22 27 chr2 67544604 67544788 -185711795 + L1ME LINE L1 5499 5681 -440 846 214 7 0 chr2 67544803 67544972 -185711611 - FRAM SINE Alu 0 170 1 631 234 47 104 chr2 67544973 67545020 -185711563 - L2 LINE L2 -11 3302 3254 2225 132 0 0 chr2 67545020 67545331 -185711252 - AluSq SINE Alu -2 311 1 631 234 47 104 chr2 67545331 67545582 -185711001 - L2 LINE L2 -59 3254 3021 1889 123 76 0 chr2 67545582 67545859 -185710724 + AluY SINE Alu 1 298 -13 828 110 0 17 chr2 67545943 67546061 -185710522 - FLAM_C SINE Alu -17 126 11 294 246 36 10 chr2 67546232 67546329 -185710254 + MLT1J LTR MaLR 114 276 -309 2020 118 34 20 chr2 67546373 67546670 -185709913 + AluJo SINE Alu 1 301 -11 259 130 0 0 chr2 67546703 67546749 -185709834 + Alu SINE Alu 257 302 0 301 217 104 47 chr2 67546972 67547078 -185709505 - MER5A DNA MER1_type -30 159 48 2030 178 114 14 chr2 67547079 67547500 -185709083 - MLT1D LTR MaLR 0 505 43 290 189 0 0 chr2 67547545 67547598 -185708985 + MLT1L LTR MaLR 555 607 -8 253 306 57 32 chr2 67547696 67547842 -185708741 + MER5B DNA MER1_type 21 189 0 268 298 18 35 chr2 67547844 67547958 -185708625 + MIR SINE MIR 105 216 -46 2331 84 7 3 chr2 67547993 67548289 -185708294 + AluSx SINE Alu 1 297 -15 825 148 0 22 chr2 67548644 67548779 -185707804 + FLAM_C SINE Alu 2 133 -10 271 277 99 51 chr2 67549380 67549565 -185707018 - MIR SINE MIR -50 212 22 203 79 26 0 chr2 67549675 67549713 -185706870 + (TCTA)n Simple_repeat Simple_repeat 3 41 0 219 69 0 0 chr2 67550303 67550332 -185706251 + (A)n Simple_repeat Simple_repeat 1 29 0 612 280 46 55 chr2 67550490 67550708 -185705875 + MIR SINE MIR 23 238 -24 189 302 38 0 chr2 67551036 67551089 -185705494 - L2 LINE L2 -5 3267 3213 817 165 0 0 chr2 67551349 67551464 -185705119 + FLAM_A SINE Alu 1 115 -18 198 0 0 0 chr2 67551467 67551489 -185705094 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 2306 108 0 0 chr2 67551984 67552281 -185704302 + AluSx SINE Alu 1 297 -15 1908 95 0 4 chr2 67554895 67555176 -185701407 + AluSx SINE Alu 34 313 0 2727 157 60 35 chr2 67555194 67555741 -185700842 - L1MB4 LINE L1 -33 6147 5587 2231 242 141 12 chr2 67555840 67556558 -185700025 + L2 LINE L2 1886 2695 -619 1272 109 0 6 chr2 67556560 67556735 -185699848 - AluSq SINE Alu -5 308 135 1332 266 61 65 chr2 67556736 67557288 -185699295 + L2 LINE L2 2690 3249 -64 1449 210 51 46 chr2 67557288 67557660 -185698923 + MLT1A2 LTR MaLR 1 374 0 1332 266 61 65 chr2 67557660 67557722 -185698861 + L2 LINE L2 3249 3310 -3 222 347 211 0 chr2 67557823 67557918 -185698665 - L2 LINE L2 -13 3259 3145 4770 159 73 15 chr2 67557935 67559009 -185697574 - L1MD1 LINE L1 0 6242 5107 628 222 113 19 chr2 67559982 67560169 -185696414 + MLT1J LTR MaLR 4 159 -250 1618 253 108 36 chr2 67560425 67560978 -185695605 + MLT1E LTR MaLR 1 593 0 2423 89 3 0 chr2 67561022 67561326 -185695257 + AluSp SINE Alu 1 305 -8 681 121 0 0 chr2 67561868 67561967 -185694616 - L1MB8 LINE L1 -5 6173 6075 829 158 23 2 chr2 67562112 67562371 -185694212 + AluJb SINE Alu 1 311 -1 200 291 101 0 chr2 67562762 67562841 -185693742 - L2 LINE L2 -12 3301 3215 406 313 35 0 chr2 67563025 67563140 -185693443 + L2 LINE L2 3150 3268 -4 26 30 0 0 chr2 67563798 67563831 -185692752 + AT_rich Low_complexity Low_complexity 1 33 0 3489 213 59 83 chr2 67565564 67566381 -185690202 - L1MEc LINE L1 -2912 3303 2467 2051 184 175 36 chr2 67566381 67566877 -185689706 - MLT1F1 LTR MaLR -2 565 1 3489 213 59 83 chr2 67566877 67566920 -185689663 - L1MEc LINE L1 -3748 2467 2424 2590 77 0 0 chr2 67566920 67567232 -185689351 - AluSx SINE Alu 0 312 1 3489 213 59 83 chr2 67567232 67567557 -185689026 - L1MEc LINE L1 -3791 2424 2093 2151 113 42 24 chr2 67567557 67567894 -185688689 - L1MA3 LINE L1 -1 6304 5962 3489 213 59 83 chr2 67567894 67568054 -185688529 - L1MEc LINE L1 -4122 2093 1931 2236 99 3 0 chr2 67568054 67568347 -185688236 - AluSg SINE Alu -15 295 2 3489 213 59 83 chr2 67568347 67568372 -185688211 - L1MEc LINE L1 -4284 1931 1907 1197 188 83 0 chr2 67568372 67568590 -185687993 + MER46A DNA MER2_type 1 236 0 3489 213 59 83 chr2 67568590 67568987 -185687596 - L1MEc LINE L1 -4308 1907 1604 2157 95 0 7 chr2 67568989 67569302 -185687281 - AluSx SINE Alu 0 315 5 313 206 0 27 chr2 67569325 67569398 -185687185 - L1MEc LINE L1 -5676 720 650 893 196 43 27 chr2 67569400 67569584 -185686999 - MER20 DNA MER1_type -1 218 32 3027 171 49 9 chr2 67569615 67570148 -185686435 + MER68 LTR ERV1 9 562 0 691 267 136 26 chr2 67570174 67570563 -185686020 - L1MEc LINE L1 -5948 448 17 562 193 200 13 chr2 67570877 67571027 -185685556 + MIR SINE MIR 7 184 -78 265 280 40 90 chr2 67571094 67571194 -185685389 - L2 LINE L2 -39 3233 3139 423 291 95 7 chr2 67571286 67571434 -185685149 - MIR SINE MIR -71 191 31 215 222 0 0 chr2 67571457 67571493 -185685090 + MIR SINE MIR 6 41 -221 404 221 0 13 chr2 67573735 67573812 -185682771 + FRAM/FAM SINE Alu 1 76 -109 2605 106 13 24 chr2 67573829 67574208 -185682375 + THE1C LTR MaLR 1 375 0 510 61 0 0 chr2 67574687 67574753 -185681830 + (TC)n Simple_repeat Simple_repeat 1 66 0 2211 111 3 3 chr2 67574753 67575059 -185681524 - AluSx SINE Alu -6 306 1 1023 286 111 25 chr2 67575292 67575697 -185680886 + MLT1K LTR MaLR 13 452 -136 244 0 0 0 chr2 67575879 67575906 -185680677 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 2232 49 7 17 chr2 67575906 67576193 -185680390 - AluY SINE Alu -1 310 1 493 290 85 14 chr2 67576311 67576671 -185679912 + HAL1b LINE L1 1115 1172 -176 998 250 57 8 chr2 67577729 67577977 -185678606 + MIR SINE MIR 2 261 -1 2305 113 0 0 chr2 67578527 67578827 -185677756 - AluSx SINE Alu -12 300 1 840 286 5 0 chr2 67579414 67579631 -185676952 - MIR SINE MIR -42 220 3 268 309 75 0 chr2 67580511 67580605 -185675978 + L2 LINE L2 1846 1946 -1368 243 0 0 0 chr2 67580610 67580637 -185675946 + (TC)n Simple_repeat Simple_repeat 1 27 0 5205 121 16 24 chr2 67580703 67581885 -185674698 + L1PA15 LINE L1 4980 6156 -9 591 192 32 8 chr2 67581916 67582041 -185674542 - MER5B DNA MER1_type -49 129 2 359 267 5 53 chr2 67582060 67582247 -185674336 - L1MA4A LINE L1 -265 6038 5861 331 214 17 34 chr2 67582169 67582286 -185674297 - L1MA9 LINE L1 -374 5938 5824 * 257 296 256 35 chr2 67582539 67582961 -185673622 + L2 LINE L2 1293 1807 -1507 600 297 148 31 chr2 67582961 67583473 -185673110 + L2 LINE L2 2066 2637 -677 2228 98 3 0 chr2 67583752 67584085 -185672498 - AluSq SINE Alu 0 334 1 507 317 247 7 chr2 67584201 67584658 -185671925 - L1 LINE L1 -1314 4832 4266 283 355 38 11 chr2 67584694 67584877 -185671706 - L2 LINE L2 -912 2402 2215 2026 150 0 6 chr2 67584968 67585281 -185671302 + AluSx SINE Alu 1 311 -1 227 292 43 12 chr2 67585937 67586098 -185670485 + L1ME4a LINE L1 5954 6119 -2 628 216 94 0 chr2 67586630 67586826 -185669757 + MIR SINE MIR 19 236 -26 2241 116 0 3 chr2 67586836 67587146 -185669437 + AluSq SINE Alu 1 309 -4 1723 154 54 17 chr2 67587193 67587491 -185669092 - AluJb SINE Alu -3 309 1 323 261 93 56 chr2 67587513 67587674 -185668909 - MIR SINE MIR -95 167 1 205 302 167 45 chr2 67587679 67587901 -185668682 - MIR SINE MIR 0 262 14 206 244 0 56 chr2 67587918 67588008 -185668575 - MER5B DNA MER1_type -32 146 62 228 319 56 35 chr2 67588111 67588255 -185668328 - L2 LINE L2 -553 2761 2615 2164 124 7 7 chr2 67588441 67588748 -185667835 + AluSx SINE Alu 1 307 -5 1448 187 4 4 chr2 67588955 67589201 -185667382 + AluJb SINE Alu 40 285 -27 250 40 0 80 chr2 67589208 67589258 -185667325 + (TAAAA)n Simple_repeat Simple_repeat 5 50 0 25 0 0 0 chr2 67589290 67589315 -185667268 + AT_rich Low_complexity Low_complexity 1 25 0 315 263 82 16 chr2 67589548 67589742 -185666841 + L1ME LINE L1 5597 5803 -318 386 313 87 38 chr2 67591055 67591320 -185665263 + L2 LINE L2 2835 3112 -160 210 136 0 0 chr2 67591470 67591514 -185665069 + (TG)n Simple_repeat Simple_repeat 2 45 0 2531 40 3 3 chr2 67591551 67591855 -185664728 + AluY SINE Alu 1 304 -7 223 250 217 11 chr2 67591916 67592008 -185664575 - MER5B DNA MER1_type -1 177 67 601 314 24 36 chr2 67592345 67592593 -185663990 - MIR SINE MIR -2 260 16 355 280 109 51 chr2 67593853 67594028 -185662555 + MIR SINE MIR 8 192 -70 2168 122 3 0 chr2 67594337 67594632 -185661951 + AluSq SINE Alu 1 296 -17 5534 153 79 68 chr2 67595154 67595665 -185660918 + Charlie1a DNA MER1_type 26 530 -2231 1698 158 19 44 chr2 67595665 67595982 -185660601 + AluJo SINE Alu 1 309 -3 5534 153 79 68 chr2 67595982 67596884 -185659699 + Charlie1a DNA MER1_type 530 1455 0 460 202 110 0 chr2 67596884 67596993 -185659590 - L1ME LINE L1 -514 5656 5536 413 271 0 8 chr2 67597200 67597318 -185659265 - MER112 DNA MER1_type -39 221 105 2486 66 0 3 chr2 67597578 67597881 -185658702 - AluY SINE Alu -9 302 1 829 236 41 4 chr2 67598352 67598598 -185657985 - MER112 DNA MER1_type 0 256 2 250 211 0 95 chr2 67598816 67598911 -185657672 + MLT1K LTR MaLR 337 422 -166 2388 81 3 0 chr2 67599250 67599546 -185657037 + AluSc SINE Alu 1 297 -12 2067 79 79 0 chr2 67599792 67600071 -185656512 + AluSq SINE Alu 1 301 -12 448 199 99 62 chr2 67601618 67601779 -185654804 + MIR SINE MIR 63 229 -33 2744 7 0 3 chr2 67602623 67602925 -185653658 + AluYa5 SINE Alu 1 301 -10 2478 79 0 0 chr2 67603080 67603383 -185653200 - AluSx SINE Alu -9 303 1 189 327 119 59 chr2 67604387 67604589 -185651994 + MIR SINE MIR 7 220 -42 188 421 19 0 chr2 67605718 67605825 -185650758 + MIR SINE MIR 47 155 -107 2052 81 4 0 chr2 67606982 67607241 -185649342 + AluSp SINE Alu 50 309 -4 21 0 0 0 chr2 67609221 67609242 -185647341 + AT_rich Low_complexity Low_complexity 1 21 0 1636 99 0 5 chr2 67609944 67610157 -185646426 - AluSg/x SINE Alu -16 294 83 692 213 0 0 chr2 67610446 67610568 -185646015 - FLAM_A SINE Alu -11 122 1 21 57 0 0 chr2 67610663 67610698 -185645885 + AT_rich Low_complexity Low_complexity 1 35 0 2583 52 3 0 chr2 67610831 67611139 -185645444 + AluY SINE Alu 1 309 -2 225 265 60 12 chr2 67611257 67611340 -185645243 - MIR SINE MIR -66 196 110 296 244 138 8 chr2 67611635 67611758 -185644825 + MLT1L LTR MaLR 475 613 -2 729 241 32 48 chr2 67612175 67612424 -185644159 + L1MC4 LINE L1 7781 8025 -17 1710 181 0 20 chr2 67612736 67612873 -185643710 + AluJb SINE Alu 1 139 -173 2347 98 3 10 chr2 67612873 67613180 -185643403 + AluSq SINE Alu 1 305 -8 1710 181 0 20 chr2 67613180 67613345 -185643238 + AluJb SINE Alu 139 297 -15 2121 79 65 4 chr2 67613985 67614264 -185642319 + AluSq SINE Alu 1 296 -17 481 45 80 57 chr2 67614311 67614487 -185642096 + (TA)n Simple_repeat Simple_repeat 1 180 0 2131 79 4 14 chr2 67614487 67614767 -185641816 - AluSq SINE Alu 0 313 37 354 234 102 0 chr2 67614813 67614941 -185641642 - L1MA10 LINE L1 -1 6333 6193 2161 101 0 24 chr2 67615099 67615419 -185641164 - AluSx SINE Alu 0 312 1 1565 177 17 17 chr2 67615897 67616185 -185640398 - AluJo SINE Alu -24 288 1 389 300 0 25 chr2 67617343 67617463 -185639120 + L2 LINE L2 3197 3313 0 180 0 0 0 chr2 67618036 67618056 -185638527 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 25 0 0 0 chr2 67619230 67619255 -185637328 + AT_rich Low_complexity Low_complexity 1 25 0 22 70 0 0 chr2 67619288 67619331 -185637252 + AT_rich Low_complexity Low_complexity 1 43 0 230 352 11 11 chr2 67619816 67619904 -185636679 - MIR SINE MIR -95 113 26 22 0 0 0 chr2 67620266 67620288 -185636295 + AT_rich Low_complexity Low_complexity 1 22 0 190 379 136 0 chr2 67621325 67621457 -185635126 - L2 LINE L2 -1 3271 3122 2338 116 0 0 chr2 67621590 67621900 -185634683 + AluSx SINE Alu 3 312 0 1421 129 153 20 chr2 67621914 67622162 -185634421 - AluJb SINE Alu -31 281 1 804 215 108 11 chr2 67622353 67622539 -185634044 - MIR SINE MIR -31 231 28 880 135 0 35 chr2 67622543 67622684 -185633899 - FLAM_C SINE Alu 0 143 8 420 233 105 40 chr2 67622755 67622929 -185633654 - MIR SINE MIR -51 211 25 186 103 0 0 chr2 67624199 67624228 -185632355 + (GGGA)n Simple_repeat Simple_repeat 1 29 0 240 35 0 0 chr2 67624819 67624848 -185631735 + (GGA)n Simple_repeat Simple_repeat 2 30 0 29 28 0 0 chr2 67624911 67624947 -185631636 + GC_rich Low_complexity Low_complexity 1 36 0 26 30 0 0 chr2 67625591 67625624 -185630959 + GC_rich Low_complexity Low_complexity 1 33 0 230 211 0 19 chr2 67626560 67626612 -185629971 + (TA)n Simple_repeat Simple_repeat 1 51 0 2286 93 0 29 chr2 67627088 67627399 -185629184 + AluSx SINE Alu 1 302 -10 33 43 0 0 chr2 67627831 67627878 -185628705 + AT_rich Low_complexity Low_complexity 1 47 0 2432 81 0 0 chr2 67627991 67628287 -185628296 - AluSg SINE Alu -14 296 1 2285 42 0 11 chr2 67629052 67629317 -185627266 - AluY SINE Alu -37 274 13 565 221 21 14 chr2 67629363 67629503 -185627080 + L1ME3A LINE L1 603 743 -5376 361 223 0 10 chr2 67629560 67629663 -185626920 + L1 LINE L1 3674 3775 -2371 467 314 88 29 chr2 67629819 67630204 -185626379 + L1ME3A LINE L1 3873 4280 -1849 1314 204 165 71 chr2 67630211 67630647 -185625936 + MLT1J LTR MaLR 35 511 0 1722 126 14 22 chr2 67630692 67630969 -185625614 + AluSx SINE Alu 32 306 -6 266 263 221 17 chr2 67631018 67631258 -185625325 + L1ME3A LINE L1 4353 4641 -1488 273 226 49 0 chr2 67631290 67631401 -185625182 + L1ME3A LINE L1 4764 4875 -1254 237 271 59 0 chr2 67631702 67631787 -185624796 - MLT1I LTR MaLR -279 130 41 803 293 36 58 chr2 67631857 67632885 -185623698 + L1ME3A LINE L1 4885 5886 -263 1072 91 0 0 chr2 67633288 67633420 -185623163 + AluSq/x SINE Alu 4 135 -178 2289 73 0 40 chr2 67633420 67633722 -185622861 + AluY SINE Alu 1 290 -21 1998 107 7 31 chr2 67634861 67634998 -185621585 + AluSx SINE Alu 1 140 -173 2461 77 3 7 chr2 67634998 67635308 -185621275 + AluY SINE Alu 1 309 -2 1998 107 7 31 chr2 67635308 67635490 -185621093 + AluSx SINE Alu 140 313 0 4101 199 88 6 chr2 67635927 67636795 -185619788 - MER45B DNA AcHobo -72 968 30 317 233 78 22 chr2 67637071 67637161 -185619422 - L1ME4a LINE L1 -39 6082 5988 424 286 41 7 chr2 67637599 67637746 -185618837 + L1ME3A LINE L1 5982 6133 -20 207 130 74 0 chr2 67638343 67638397 -185618186 + (TA)n Simple_repeat Simple_repeat 2 59 0 201 297 14 0 chr2 67638686 67638760 -185617823 - MIR SINE MIR -3 259 185 24 32 0 0 chr2 67639219 67639250 -185617333 + AT_rich Low_complexity Low_complexity 1 31 0 4809 98 18 18 chr2 67639433 67640169 -185616414 + L1MA3 LINE L1 5570 6305 0 583 227 189 21 chr2 67640575 67640813 -185615770 - L1MC4a LINE L1 -1852 5956 5679 294 143 0 0 chr2 67642777 67642826 -185613757 + (TCCC)n Simple_repeat Simple_repeat 4 52 0 216 0 0 0 chr2 67642855 67642879 -185613704 + (T)n Simple_repeat Simple_repeat 1 24 0 191 36 36 0 chr2 67643352 67643380 -185613203 + (TTA)n Simple_repeat Simple_repeat 2 30 0 638 175 0 9 chr2 67643380 67643494 -185613089 - AluJb SINE Alu -194 118 6 492 214 35 147 chr2 67644323 67644608 -185611975 - MIR SINE MIR 0 262 10 842 204 15 36 chr2 67645209 67645405 -185611178 + MIR SINE MIR 1 192 -70 310 283 232 7 chr2 67645735 67645873 -185610710 + MIR3 SINE MIR 4 172 -36 604 243 90 95 chr2 67645961 67646372 -185610211 + MLT1K LTR MaLR 180 588 0 13677 111 34 11 chr2 67648228 67649180 -185607403 - Tigger1 DNA MER2_type 0 2418 1489 1787 185 3 3 chr2 67649180 67649483 -185607100 + AluJo SINE Alu 1 303 -9 13677 111 34 11 chr2 67649483 67650553 -185606030 - Tigger1 DNA MER2_type -929 1489 346 231 36 0 0 chr2 67650553 67650581 -185606002 + (GA)n Simple_repeat Simple_repeat 1 28 0 13677 111 34 11 chr2 67650581 67650608 -185605975 - Tigger1 DNA MER2_type -2072 346 321 911 176 6 0 chr2 67650606 67650765 -185605818 - Tigger1 DNA MER2_type -2203 215 56 * 180 0 0 0 chr2 67651586 67651606 -185604977 + (TTCA)n Simple_repeat Simple_repeat 4 23 0 247 335 77 28 chr2 67651612 67651794 -185604789 - L2 LINE L2 -4 3309 3119 1068 209 107 84 chr2 67651835 67652190 -185604393 + MLT1A2 LTR MaLR 1 363 -11 430 167 33 11 chr2 67652521 67652611 -185603972 + Charlie4a DNA MER1_type 253 344 -164 500 220 86 62 chr2 67652627 67652836 -185603747 + L2 LINE L2 3090 3303 -10 2465 87 3 0 chr2 67653898 67654207 -185602376 - AluSp SINE Alu -3 310 1 2269 96 10 0 chr2 67654517 67654818 -185601765 - AluSx SINE Alu -8 304 1 2392 105 0 10 chr2 67655151 67655465 -185601118 - AluSx SINE Alu -1 311 1 236 286 36 48 chr2 67656516 67656684 -185599899 + L2 LINE L2 2335 2500 -814 383 167 0 0 chr2 67656693 67656759 -185599824 + MIR SINE MIR 91 156 -106 837 118 0 8 chr2 67656767 67656886 -185599697 + FLAM_C SINE Alu 1 118 -15 201 272 87 39 chr2 67656889 67656992 -185599591 + MIR SINE MIR 132 239 -23 244 346 89 34 chr2 67657030 67657322 -185599261 + L2 LINE L2 2531 2838 -476 928 196 22 0 chr2 67657780 67657964 -185598619 - MER5A DNA MER1_type -1 188 1 2526 61 0 19 chr2 67660106 67660418 -185596165 + AluY SINE Alu 1 306 -5 652 226 55 12 chr2 67660482 67660703 -185595880 + MIR SINE MIR 30 261 -1 1644 211 93 56 chr2 67661393 67661876 -185594707 + MLT1D LTR MaLR 5 505 0 530 223 107 0 chr2 67661882 67662003 -185594580 + MLT1J LTR MaLR 62 195 -316 283 189 0 68 chr2 67662025 67662099 -185594484 - MLT1A2 LTR MaLR 0 365 297 2966 114 34 2 chr2 67662108 67662548 -185594035 - L1PA16 LINE L1 -4 6162 5709 511 197 42 78 chr2 67662552 67662694 -185593889 + MLT1D LTR MaLR 92 228 -277 588 170 0 28 chr2 67662756 67662862 -185593721 - L1PA16 LINE L1 -448 5718 5616 1204 167 199 28 chr2 67662862 67663144 -185593439 - MLT1A2 LTR MaLR -44 330 1 308 215 96 146 chr2 67663165 67663375 -185593208 + MLT1J LTR MaLR 241 437 -74 2329 78 14 3 chr2 67663375 67663668 -185592915 + AluSx SINE Alu 1 296 -16 308 215 96 146 chr2 67663668 67663718 -185592865 + MLT1J LTR MaLR 437 488 -23 1071 190 52 30 chr2 67665468 67665820 -185590763 - MSTD LTR MaLR 0 396 1 365 250 108 58 chr2 67665989 67666229 -185590354 + L1MC5 LINE L1 7609 7860 -101 240 180 0 20 chr2 67666293 67666343 -185590240 + MER103 DNA DNA 1 49 -117 677 265 11 0 chr2 67666650 67666831 -185589752 + MIR SINE MIR 66 248 -14 371 140 0 0 chr2 67667148 67667198 -185589385 - MLT1J LTR MaLR -367 144 95 423 0 0 0 chr2 67667216 67667263 -185589320 + (TCTA)n Simple_repeat Simple_repeat 1 47 0 261 268 62 10 chr2 67668267 67668364 -185588219 - L1MC4a LINE L1 -1878 5930 5829 993 251 48 101 chr2 67668470 67668995 -185587588 - L1MC4a LINE L1 -1976 5832 5336 278 140 20 0 chr2 67668969 67669019 -185587564 - L1MC4a LINE L1 -1310 4836 4786 * 305 304 88 0 chr2 67669070 67669172 -185587411 + MIR3 SINE MIR 45 155 -53 221 314 74 62 chr2 67669217 67669459 -185587124 - L2 LINE L2 -49 3223 2979 639 311 224 10 chr2 67670229 67671300 -185585283 - L2 LINE L2 -649 2665 1366 1310 128 20 0 chr2 67671416 67671612 -185584971 - AluJb SINE Alu -4 308 109 1596 143 49 38 chr2 67673421 67673708 -185582875 - AluJo SINE Alu -14 298 9 4175 91 9 0 chr2 67674996 67675543 -185581040 + MER41A LTR ERV1 1 552 -2 186 43 0 0 chr2 67675600 67675623 -185580960 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 308 172 17 0 chr2 67675821 67675879 -185580704 - MER91 DNA MER1_type -76 64 6 227 306 14 0 chr2 67676188 67676260 -185580323 - MIR3 SINE MIR -54 154 82 2048 162 147 41 chr2 67676402 67676669 -185579914 - MLT2B1 LTR ERVL 0 520 283 1051 32 25 19 chr2 67676669 67676826 -185579757 + (GAAA)n Simple_repeat Simple_repeat 2 159 0 2048 162 147 41 chr2 67676826 67677021 -185579562 - MLT2B1 LTR ERVL -237 283 9 238 186 35 58 chr2 67677280 67677355 -185579228 - L1ME4a LINE L1 -1 6120 6046 2383 91 0 3 chr2 67677355 67677664 -185578919 + AluSg SINE Alu 1 308 -2 320 78 0 20 chr2 67677605 67677681 -185578902 + Alu SINE Alu 251 325 0 24 0 0 0 chr2 67677713 67677737 -185578846 + AT_rich Low_complexity Low_complexity 1 24 0 27 49 0 0 chr2 67678353 67678394 -185578189 + AT_rich Low_complexity Low_complexity 1 41 0 2164 106 0 7 chr2 67678415 67678716 -185577867 - AluSx SINE Alu -13 299 1 372 316 44 0 chr2 67679360 67679474 -185577109 + L2 LINE L2 3154 3272 0 930 129 14 0 chr2 67680020 67680167 -185576416 + FRAM SINE Alu 18 166 -10 544 281 28 6 chr2 67680493 67680671 -185575912 + MIR SINE MIR 21 202 -60 306 279 0 0 chr2 67680682 67680779 -185575804 + MLT1H1 LTR MaLR 14 153 -396 1690 194 42 60 chr2 67680785 67681233 -185575350 + MLT1D LTR MaLR 7 446 -59 1240 142 35 0 chr2 67681235 67681432 -185575151 - AluSg/x SINE Alu -13 297 94 643 231 217 24 chr2 67681475 67681818 -185574765 + MLT1H1 LTR MaLR 106 522 -8 23 0 0 0 chr2 67681883 67681906 -185574677 + AT_rich Low_complexity Low_complexity 1 23 0 666 188 0 31 chr2 67681907 67682035 -185574548 - FLAM_C SINE Alu -9 124 1 299 222 0 0 chr2 67682066 67682120 -185574463 + MIR SINE MIR 201 254 -8 2123 198 32 89 chr2 67682120 67682153 -185574430 + MLT2B3 LTR ERVL 1 34 -520 3402 104 122 29 chr2 67682153 67682711 -185573872 + LTR9 LTR ERV1 1 610 -2 2123 198 32 89 chr2 67682711 67683264 -185573319 + MLT2B3 LTR ERVL 34 554 0 704 206 24 0 chr2 67683293 67683419 -185573164 + Tigger3(Golem) DNA MER2_type 2 130 -2899 416 169 117 0 chr2 67683521 67683598 -185572985 + FAM SINE Alu 83 168 -17 1684 184 108 44 chr2 67683652 67684086 -185572497 - MLT1C LTR MaLR 0 467 6 1800 145 3 3 chr2 67684197 67684506 -185572077 + AluSx SINE Alu 1 309 0 1392 190 98 46 chr2 67684577 67684924 -185571659 + MLT1A1 LTR MaLR 1 365 0 1513 167 0 0 chr2 67685356 67685608 -185570975 + AluJo SINE Alu 37 288 -24 212 257 230 0 chr2 67685666 67685740 -185570843 - MIR SINE MIR -64 198 108 309 281 21 21 chr2 67685741 67685837 -185570746 + MLT1J2 LTR MaLR 1 96 -446 376 297 77 10 chr2 67686764 67686959 -185569624 + L1MC4a LINE L1 5721 5928 -1880 1878 144 0 3 chr2 67686972 67687263 -185569320 + AluJo SINE Alu 6 295 -17 586 200 85 0 chr2 67687440 67687570 -185569013 + L1ME3A LINE L1 6021 6161 -9 180 0 0 0 chr2 67687577 67687597 -185568986 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 503 303 48 0 chr2 67688255 67688420 -185568163 - MIR SINE MIR -12 250 78 586 226 165 60 chr2 67688423 67688851 -185567732 - MLT1G3 LTR MaLR -30 525 21 843 65 0 0 chr2 67688851 67688958 -185567625 - AluSp/q SINE Alu -15 298 192 255 235 0 20 chr2 67689030 67689081 -185567502 - MIR SINE MIR -178 84 35 847 250 100 88 chr2 67689862 67690394 -185566189 + MER34 LTR ERV1 1 538 -4 193 305 0 0 chr2 67690406 67690465 -185566118 - L2 LINE L2 -1 3271 3213 2057 138 0 0 chr2 67690623 67690928 -185565655 + AluSx SINE Alu 1 305 -7 1796 168 0 0 chr2 67691451 67691743 -185564840 + 7SLRNA srpRNA srpRNA 1 292 -28 2136 82 4 0 chr2 67691763 67692042 -185564541 - AluSx SINE Alu -32 280 1 21 36 0 0 chr2 67692140 67692168 -185564415 + AT_rich Low_complexity Low_complexity 1 28 0 1933 128 14 0 chr2 67692335 67692631 -185563952 + AluSx SINE Alu 1 300 -12 181 279 213 0 chr2 67693339 67693400 -185563183 + MIR SINE MIR 189 262 0 696 256 29 24 chr2 67693655 67693944 -185562639 + MLT1J2 LTR MaLR 90 427 -23 221 317 82 49 chr2 67694191 67694374 -185562209 - MIR3 SINE MIR -1 207 19 542 350 9 36 chr2 67694391 67694614 -185561969 + MIR SINE MIR 2 218 -44 1443 183 14 30 chr2 67694616 67694911 -185561672 + AluJo SINE Alu 1 290 -22 2542 199 67 39 chr2 67695399 67695475 -185561108 + LTR48B LTR ERV1 1 73 -571 2203 90 13 7 chr2 67695475 67695785 -185560798 - AluSp SINE Alu 0 313 2 2542 199 67 39 chr2 67695785 67696331 -185560252 + LTR48B LTR ERV1 73 641 -3 2555 141 14 30 chr2 67696331 67696764 -185559819 + MSTB LTR MaLR 1 426 0 712 192 0 8 chr2 67697756 67697886 -185558697 - FLAM_A SINE Alu -4 129 1 3557 127 75 0 chr2 67698318 67698909 -185557674 + LTR24C LTR ERV1 1 635 0 2787 130 11 75 chr2 67698967 67699499 -185557084 + L1MB3 LINE L1 5671 6168 -15 387 60 0 0 chr2 67699501 67699551 -185557032 + (CA)n Simple_repeat Simple_repeat 1 50 0 2105 196 38 68 chr2 67699960 67700538 -185556045 + MER34B LTR ERV1 5 565 0 259 240 19 0 chr2 67700578 67700682 -185555901 + (TA)n Simple_repeat Simple_repeat 1 106 0 656 252 0 0 chr2 67700691 67700851 -185555732 + L1ME3 LINE L1 6005 6161 -1 418 264 16 54 chr2 67700852 67700981 -185555602 - MER5B DNA MER1_type -54 124 1 1350 184 79 79 chr2 67702160 67702540 -185554043 + MER113 DNA MER1_type? 8 387 -134 2697 132 28 12 chr2 67702642 67703067 -185553516 + MSTB1 LTR MaLR 1 432 0 207 291 13 25 chr2 67703091 67703170 -185553413 + CT-rich Low_complexity Low_complexity 3 80 0 716 181 135 59 chr2 67703613 67703916 -185552667 - LTR37A LTR ERV1 -20 406 81 808 131 7 36 chr2 67703922 67704059 -185552524 + FLAM_C SINE Alu 1 133 0 805 145 5 4 chr2 67704077 67704338 -185552245 + AluJ SINE Alu 2 228 -84 286 279 0 13 chr2 67704341 67704420 -185552163 - LTR37A LTR ERV1 -348 78 1 262 282 114 54 chr2 67704573 67704722 -185551861 + MIR3 SINE MIR 43 200 -8 2089 90 40 3 chr2 67704899 67705200 -185551383 - AluSx SINE Alu 0 312 1 1181 91 152 0 chr2 67706249 67706447 -185550136 - MER30 DNA MER1_type -2 228 1 215 276 61 50 chr2 67706581 67706762 -185549821 - L2 LINE L2 -669 2645 2463 350 257 169 22 chr2 67706905 67707041 -185549542 + MIR SINE MIR 14 169 -93 916 241 31 9 chr2 67707171 67707395 -185549188 - MIR SINE MIR -26 236 8 207 347 28 0 chr2 67707411 67707483 -185549100 - L2 LINE L2 -1030 2284 2211 728 109 0 0 chr2 67708130 67708231 -185548352 - HY3 scRNA scRNA 0 101 1 367 284 9 26 chr2 67708411 67708527 -185548056 - MER81 DNA DNA 0 114 1 1011 257 112 89 chr2 67708817 67709283 -185547300 - MLT1L LTR MaLR -5 610 125 2097 117 3 0 chr2 67709283 67709582 -185547001 - AluSx SINE Alu -4 308 9 1011 257 112 89 chr2 67709582 67709711 -185546872 - MLT1L LTR MaLR -490 125 1 233 276 76 67 chr2 67710139 67710244 -185546339 + L2 LINE L2 3201 3306 -7 221 200 67 0 chr2 67710869 67710914 -185545669 - L2 LINE L2 -2 3270 3223 941 118 0 0 chr2 67711594 67711729 -185544854 + AluSq/x SINE Alu 1 135 -177 2182 107 10 0 chr2 67711729 67712037 -185544546 + AluSq SINE Alu 1 311 -2 216 200 0 0 chr2 67712037 67712082 -185544501 + GA-rich Low_complexity Low_complexity 2 46 0 879 146 6 13 chr2 67712467 67712625 -185543958 - FRAM SINE Alu -9 167 11 2147 106 0 7 chr2 67713398 67713699 -185542884 + AluSx SINE Alu 1 299 -13 292 291 91 18 chr2 67713806 67713916 -185542667 + MIR SINE MIR 34 151 -111 379 237 0 0 chr2 67713920 67713996 -185542587 + HsTC2 DNA Tc2 3 78 -1820 949 259 88 9 chr2 67714060 67714386 -185542197 + MLT1I LTR MaLR 81 407 -2 276 198 89 69 chr2 67714386 67714482 -185542101 + HsTC2 DNA Tc2 1801 1898 0 326 261 0 0 chr2 67714499 67714568 -185542015 + MIR SINE MIR 194 262 0 2507 136 46 80 chr2 67714684 67715119 -185541464 - LTR54 LTR ERV1 -4 506 90 1997 106 53 0 chr2 67715119 67715401 -185541182 - AluSp SINE Alu -16 297 1 2507 136 46 80 chr2 67715401 67715489 -185541094 - LTR54 LTR ERV1 -420 90 1 238 260 55 0 chr2 67716492 67716565 -185540018 - MLT1J LTR MaLR 0 511 435 1986 98 0 28 chr2 67716567 67716853 -185539730 + AluSq SINE Alu 1 278 -35 207 0 0 0 chr2 67716854 67716877 -185539706 + (TC)n Simple_repeat Simple_repeat 2 24 0 432 119 86 0 chr2 67716880 67717265 -185539318 + (TA)n Simple_repeat Simple_repeat 1 418 0 314 164 60 15 chr2 67717266 67717333 -185539250 - L1MCa LINE L1 -4362 2064 1995 319 185 69 0 chr2 67717338 67717753 -185538830 + (TA)n Simple_repeat Simple_repeat 1 443 0 335 231 44 22 chr2 67717762 67717853 -185538730 - L1MC4 LINE L1 -1338 6704 6612 * 343 182 68 34 chr2 67717780 67717868 -185538715 + L1MC4 LINE L1 6614 6704 -1338 329 144 89 67 chr2 67717840 67717930 -185538653 + L1MCa LINE L1 1972 2063 -4363 * 309 132 73 59 chr2 67717955 67718023 -185538560 + L1MCa LINE L1 1995 2063 -4363 227 73 73 0 chr2 67718023 67718078 -185538505 + (TA)n Simple_repeat Simple_repeat 2 60 0 317 145 118 53 chr2 67718079 67718155 -185538428 + L1MCa LINE L1 1995 2075 -4351 45 45 0 0 chr2 67718160 67718226 -185538357 + AT_rich Low_complexity Low_complexity 1 66 0 747 249 130 59 chr2 67718229 67718638 -185537945 - MLT1J LTR MaLR -71 440 3 287 186 0 0 chr2 67718908 67718951 -185537632 + MER66A LTR ERV1 295 337 -141 1906 128 3 24 chr2 67719059 67719393 -185537190 + AluJo SINE Alu 1 328 0 561 333 72 22 chr2 67719673 67719991 -185536592 + L2 LINE L2 2916 3249 -23 751 239 141 0 chr2 67720008 67720192 -185536391 + MIR SINE MIR 2 211 -51 196 250 23 68 chr2 67720699 67720787 -185535796 - MIR SINE MIR -75 133 50 353 293 114 0 chr2 67720794 67720934 -185535649 - L2 LINE L2 0 3313 3158 780 178 50 50 chr2 67720939 67721119 -185535464 + MER104 DNA MER2_type 1 180 0 609 219 55 38 chr2 67721398 67721581 -185535002 - MLT1J LTR MaLR -116 395 210 925 251 153 10 chr2 67722467 67722774 -185533809 + MLT1H LTR MaLR 2 352 -197 471 168 53 11 chr2 67722813 67722908 -185533675 + MLT1H LTR MaLR 449 547 -2 2143 113 3 0 chr2 67724286 67724596 -185531987 - AluSq SINE Alu -2 311 1 2139 114 16 0 chr2 67725136 67725442 -185531141 + AluSx SINE Alu 1 311 -1 727 178 34 0 chr2 67725731 67725849 -185530734 + FLAM_A SINE Alu 1 122 -11 1344 181 106 15 chr2 67725997 67726262 -185530321 - MLT1F LTR MaLR 0 542 254 24 0 0 0 chr2 67726270 67726294 -185530289 + AT_rich Low_complexity Low_complexity 1 24 0 243 0 0 0 chr2 67727296 67727323 -185529260 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 1645 173 7 0 chr2 67727324 67727595 -185528988 - AluJb SINE Alu -39 273 1 2852 165 16 46 chr2 67727692 67728262 -185528321 + L1MB5 LINE L1 5603 6155 -19 2179 114 3 0 chr2 67728280 67728606 -185527977 + AluSx SINE Alu 3 329 0 470 122 171 0 chr2 67728616 67728698 -185527885 - FLAM_A SINE Alu -3 139 44 357 223 11 53 chr2 67728842 67728936 -185527647 - MLT1K LTR MaLR -81 507 418 304 272 103 36 chr2 67729452 67729647 -185526936 + L1ME4a LINE L1 5561 5768 -353 1279 225 63 33 chr2 67729647 67729789 -185526794 + AluJo SINE Alu 1 137 -175 2393 107 7 0 chr2 67729789 67730099 -185526484 + AluSx SINE Alu 1 312 0 1279 225 63 33 chr2 67730099 67730258 -185526325 + AluJo SINE Alu 137 311 -1 22 35 0 0 chr2 67730358 67730387 -185526196 + AT_rich Low_complexity Low_complexity 1 29 0 36 53 0 13 chr2 67730429 67730449 -185526134 + AT_rich Low_complexity Low_complexity 1 20 -54 2260 93 7 0 chr2 67730449 67730738 -185525845 + AluSx SINE Alu 1 291 -21 36 53 0 13 chr2 67730738 67730792 -185525791 + AT_rich Low_complexity Low_complexity 20 74 0 445 258 66 0 chr2 67731264 67731431 -185525152 + L1ME4a LINE L1 5937 6114 -7 190 303 76 8 chr2 67733632 67733751 -185522832 - MIR3 SINE MIR -53 155 29 21 0 0 0 chr2 67733855 67733876 -185522707 + GC_rich Low_complexity Low_complexity 1 21 0 376 301 106 10 chr2 67734589 67734788 -185521795 + L2 LINE L2 304 521 -2793 1245 156 64 79 chr2 67734796 67735121 -185521462 + L1MC1 LINE L1 6026 7785 0 2421 328 113 13 chr2 67735132 67736429 -185520154 + L2 LINE L2 566 1991 -1323 672 268 49 53 chr2 67736467 67736906 -185519677 + MLT1H LTR MaLR 41 549 0 968 296 256 4 chr2 67736907 67737744 -185518839 + L2 LINE L2 1988 3075 -238 207 189 0 0 chr2 67737756 67737793 -185518790 + (CA)n Simple_repeat Simple_repeat 1 37 0 656 179 8 30 chr2 67737825 67737959 -185518624 - FLAM_C SINE Alu 0 143 13 496 278 48 0 chr2 67737970 67738096 -185518487 + L2 LINE L2 3180 3311 -2 477 0 0 0 chr2 67738700 67738753 -185517830 + (CA)n Simple_repeat Simple_repeat 2 54 0 34 55 0 0 chr2 67739778 67739833 -185516750 + GC_rich Low_complexity Low_complexity 1 55 0 1218 205 103 71 chr2 67740942 67741406 -185515177 - MLT1H LTR MaLR 0 549 71 823 212 159 9 chr2 67741520 67741746 -185514837 + MIR SINE MIR 2 261 -1 1640 127 0 8 chr2 67741947 67742183 -185514400 + AluJb SINE Alu 60 293 -19 289 320 80 16 chr2 67742225 67742350 -185514233 + MIR SINE MIR 28 160 -102 270 290 97 62 chr2 67742577 67742722 -185513861 + L2 LINE L2 3164 3313 0 180 192 308 0 chr2 67742860 67742938 -185513645 - MER5B DNA MER1_type -2 176 75 1942 155 0 3 chr2 67744226 67744516 -185512067 - AluJb SINE Alu -23 289 1 213 288 32 72 chr2 67744603 67744728 -185511855 + MER5A DNA MER1_type 11 130 -59 584 233 0 8 chr2 67744733 67744853 -185511730 - FLAM_A SINE Alu -10 132 14 302 259 210 10 chr2 67744958 67745098 -185511485 + MER5B DNA MER1_type 1 179 -10 1841 116 0 103 chr2 67745257 67745586 -185510997 - AluJb SINE Alu -17 295 1 1175 155 127 35 chr2 67746004 67746320 -185510263 + Charlie1b DNA MER1_type 54 398 -125 2285 121 0 0 chr2 67746322 67746629 -185509954 - AluSx SINE Alu -5 307 1 806 143 8 15 chr2 67746663 67746796 -185509787 - FLAM_A SINE Alu -4 138 7 2112 95 29 0 chr2 67746806 67747110 -185509473 - AluSg SINE Alu 0 312 1 1188 114 75 30 chr2 67747112 67747313 -185509270 - AluSg/x SINE Alu -19 293 84 636 182 0 38 chr2 67747313 67747445 -185509138 + Charlie1b DNA MER1_type 397 523 0 871 139 0 0 chr2 67747955 67748077 -185508506 + FLAM_C SINE Alu 3 124 -19 339 85 0 0 chr2 67748869 67748916 -185507667 + (TCCC)n Simple_repeat Simple_repeat 2 48 0 281 48 48 0 chr2 67748915 67748957 -185507626 + (TTTC)n Simple_repeat Simple_repeat 2 45 0 * 326 207 0 0 chr2 67748974 67749035 -185507548 - FRAM/FAM SINE Alu -97 69 16 25 0 0 0 chr2 67749225 67749250 -185507333 + AT_rich Low_complexity Low_complexity 1 25 0 703 178 158 0 chr2 67750871 67751023 -185505560 - AluJo SINE Alu -19 293 118 2250 149 28 101 chr2 67751023 67751136 -185505447 - L1MB3 LINE L1 -11 6172 6052 2234 119 0 3 chr2 67751136 67751429 -185505154 - AluSx SINE Alu -15 297 6 2250 149 28 101 chr2 67751429 67751657 -185504926 - L1MB3 LINE L1 -131 6052 5885 2182 167 34 86 chr2 67751657 67751766 -185504817 - LTR54 LTR ERV1 0 510 397 2443 91 3 0 chr2 67751766 67752074 -185504509 + AluSx SINE Alu 1 309 -3 2182 167 34 86 chr2 67752074 67752502 -185504081 - LTR54 LTR ERV1 -113 397 1 2250 149 28 101 chr2 67752502 67752723 -185503860 - L1MB3 LINE L1 -298 5885 5650 237 299 177 53 chr2 67753496 67753891 -185502692 - L2 LINE L2 -525 2789 2346 705 237 170 16 chr2 67753917 67754111 -185502472 - MIR SINE MIR -4 258 35 2617 165 31 50 chr2 67754640 67755180 -185501403 + LTR26B LTR ERV1 1 530 -1 636 110 48 123 chr2 67755451 67755597 -185500986 - MER44D DNA MER2_type -196 413 9 337 312 37 9 chr2 67755614 67755723 -185500860 + L2 LINE L2 3141 3252 -20 269 297 67 86 chr2 67755863 67756072 -185500511 - L2 LINE L2 -14 3258 3054 521 183 6 40 chr2 67756153 67756196 -185500387 - L1MB7 LINE L1 -6 6177 6134 1625 166 28 25 chr2 67756196 67756480 -185500103 + AluJb SINE Alu 1 285 -27 521 183 6 40 chr2 67756480 67756591 -185499992 - L1MB7 LINE L1 -49 6134 6033 2442 87 0 0 chr2 67757375 67757674 -185498909 - AluSc SINE Alu -10 299 1 1829 141 27 57 chr2 67757743 67757795 -185498788 - L1MB7 LINE L1 -19 6165 6113 1541 163 43 25 chr2 67757795 67758071 -185498512 + AluJb SINE Alu 1 281 -31 207 0 0 0 chr2 67758071 67758094 -185498489 + (TTAA)n Simple_repeat Simple_repeat 2 24 0 1829 141 27 57 chr2 67758094 67758207 -185498376 - L1MB7 LINE L1 -70 6114 5999 1291 189 15 118 chr2 67758207 67758277 -185498306 - MLT1A1 LTR MaLR 0 365 289 2211 118 16 0 chr2 67758277 67758583 -185498000 - AluSp SINE Alu -2 311 1 1291 189 15 118 chr2 67758583 67758753 -185497830 - MLT1A1 LTR MaLR -76 289 181 1932 158 0 42 chr2 67758753 67758919 -185497664 - AluJb SINE Alu -15 297 148 2201 135 0 0 chr2 67758919 67759231 -185497352 - AluSx SINE Alu 0 312 1 1932 158 0 42 chr2 67759231 67759374 -185497209 - AluJb SINE Alu -164 148 1 1291 189 15 118 chr2 67759374 67759539 -185497044 - MLT1A1 LTR MaLR -184 181 1 1829 141 27 57 chr2 67759539 67759739 -185496844 - L1MB7 LINE L1 -185 5999 5809 1315 148 135 12 chr2 67759739 67760095 -185496488 - LTR47A LTR ERVL 0 452 1 1158 161 125 61 chr2 67760125 67760454 -185496129 - L1MB7 LINE L1 -398 5780 5431 351 209 90 61 chr2 67760655 67760784 -185495799 + MIR SINE MIR 35 169 -39 313 197 15 0 chr2 67760786 67760852 -185495731 + HsTC2 DNA Tc2 4 70 -1828 1363 249 37 10 chr2 67760909 67761315 -185495268 + HsTC2 DNA Tc2 1283 1875 -23 652 178 17 35 chr2 67761485 67761701 -185494882 - LTR2 LTR ERV1 0 490 267 384 256 18 79 chr2 67761704 67761868 -185494715 - LTR2 LTR ERV1 -295 154 1 379 203 0 0 chr2 67761868 67761942 -185494641 - Harlequin LTR ERV1 -1 6895 6822 361 197 0 0 chr2 67761938 67761999 -185494584 - Harlequin LTR ERV1 -1369 5527 5467 * 2909 188 30 0 chr2 67761995 67762522 -185494061 - HERVE LTR ERV1 -1802 6011 5469 * 16487 141 2 14 chr2 67762511 67765097 -185491486 - HERVE LTR ERV1 -2717 5096 2541 38771 64 18 5 chr2 67765097 67771174 -185485409 + L1PA5 LINE L1 5 6161 0 9958 203 40 43 chr2 67771175 67773739 -185482844 - HERVE LTR ERV1 -5258 2555 1 514 137 68 171 chr2 67773739 67773944 -185482639 - LTR2 LTR ERV1 0 449 266 456 231 24 77 chr2 67773940 67774109 -185482474 - LTR2 LTR ERV1 -289 160 1 * 1945 166 0 0 chr2 67774239 67774534 -185482049 + AluJo SINE Alu 1 295 -17 2313 119 0 0 chr2 67774578 67774881 -185481702 - AluSx SINE Alu -9 303 1 604 180 0 9 chr2 67775096 67775207 -185481376 - MER63A DNA MER1_type -44 166 57 240 226 78 69 chr2 67776092 67776194 -185480389 - MER5A DNA MER1_type 0 189 87 297 65 32 48 chr2 67776205 67776267 -185480316 + (TTTC)n Simple_repeat Simple_repeat 4 64 0 2240 115 10 10 chr2 67776273 67776585 -185479998 - AluSp SINE Alu -1 312 1 586 81 0 0 chr2 67776586 67776660 -185479923 - MER5A DNA MER1_type -113 76 3 282 298 157 0 chr2 67776777 67776898 -185479685 + L2 LINE L2 2919 3058 -214 275 280 136 0 chr2 67778486 67778604 -185477979 - Charlie8 DNA MER1_type -2180 237 104 717 291 108 5 chr2 67779870 67780083 -185476500 + MIR SINE MIR 14 248 -14 1838 197 95 97 chr2 67780097 67780737 -185475846 - LTR48B LTR ERV1 -5 639 1 22 43 0 21 chr2 67780887 67780915 -185475668 + AT_rich Low_complexity Low_complexity 1 29 -17 1538 189 84 7 chr2 67780915 67781212 -185475371 - 7SLRNA srpRNA srpRNA 0 320 1 22 43 0 21 chr2 67781212 67781230 -185475353 + AT_rich Low_complexity Low_complexity 29 46 0 285 350 101 7 chr2 67781452 67781729 -185474854 + L2 LINE L2 1372 1674 -1640 193 234 64 0 chr2 67781892 67781939 -185474644 - L3 LINE CR1 -121 1456 1407 388 218 23 11 chr2 67782049 67782136 -185474447 - MLT1J LTR MaLR -331 180 93 1117 139 23 6 chr2 67782144 67782317 -185474266 + MSTB LTR MaLR 1 176 -250 565 99 0 0 chr2 67782333 67782414 -185474169 + MSTB LTR MaLR 348 428 0 191 344 0 0 chr2 67782501 67782591 -185473992 + L2 LINE L2 1730 1819 -1495 434 210 40 0 chr2 67782660 67782760 -185473823 - U13 snRNA snRNA 0 104 1 2176 110 0 7 chr2 67783171 67783479 -185473104 - AluSx SINE Alu -6 306 1 2123 105 0 3 chr2 67783650 67783944 -185472639 + AluSq SINE Alu 9 301 -12 419 238 68 75 chr2 67783971 67784118 -185472465 + MIR SINE MIR 32 177 -85 238 296 155 21 chr2 67784356 67784498 -185472085 - MLT1K LTR MaLR -328 260 100 684 251 47 33 chr2 67784569 67784906 -185471677 - LTR35 LTR ERV1 0 677 350 324 253 48 0 chr2 67785372 67785455 -185471128 + ORSL DNA AcHobo 1 87 -188 1154 201 87 121 chr2 67785509 67785853 -185470730 + MER39 LTR ERV1 67 591 -116 1834 155 3 16 chr2 67785853 67786169 -185470414 - AluJo SINE Alu 0 312 1 1154 201 87 121 chr2 67786169 67786282 -185470301 + MER39 LTR ERV1 591 706 -1 518 209 194 0 chr2 67786290 67786419 -185470164 + ORSL DNA AcHobo 122 275 0 753 155 0 23 chr2 67786836 67786965 -185469618 + FLAM_C SINE Alu 2 127 -6 1141 281 70 16 chr2 67786982 67787356 -185469227 - MLT1I LTR MaLR -15 394 1 351 0 0 0 chr2 67787921 67787960 -185468623 + (TG)n Simple_repeat Simple_repeat 2 40 0 1368 111 0 55 chr2 67788475 67788692 -185467891 + AluSg/x SINE Alu 81 285 -27 453 228 109 70 chr2 67788922 67789197 -185467386 + MLT1F1 LTR MaLR 36 365 -202 598 146 0 0 chr2 67789220 67789309 -185467274 + FRAM SINE Alu 22 110 -66 652 203 12 133 chr2 67789316 67789557 -185467026 + MLT1F1 LTR MaLR 356 567 0 1008 186 0 0 chr2 67790011 67790188 -185466395 - AluJb SINE Alu 0 312 136 387 240 50 10 chr2 67790295 67790395 -185466188 + MIR3 SINE MIR 66 169 -39 886 204 41 0 chr2 67790494 67790690 -185465893 - MER3 DNA MER1_type -1 208 5 438 194 150 139 chr2 67790707 67790778 -185465805 + MER5A DNA MER1_type 8 77 -112 2305 109 0 0 chr2 67790778 67791091 -185465492 + AluSq SINE Alu 1 313 0 438 194 150 139 chr2 67791091 67791199 -185465384 + MER5A DNA MER1_type 77 189 0 2130 108 0 7 chr2 67791266 67791571 -185465012 + AluJb SINE Alu 1 303 -9 541 280 126 28 chr2 67791575 67791789 -185464794 + MIR SINE MIR 28 262 0 1771 144 7 3 chr2 67792348 67792633 -185463950 - AluJb SINE Alu -26 286 1 702 209 95 13 chr2 67792663 67792821 -185463762 - MER5A DNA MER1_type -6 183 13 1702 153 27 7 chr2 67794039 67794333 -185462250 - AluJb SINE Alu -12 300 1 2333 75 3 0 chr2 67794342 67794647 -185461936 - AluY SINE Alu -5 306 1 1843 172 30 25 chr2 67794879 67795274 -185461309 + L1ME1 LINE L1 5537 5933 -233 1035 162 0 27 chr2 67795274 67795459 -185461124 + FRAM SINE Alu 1 173 -3 339 314 39 20 chr2 67795488 67795641 -185460942 - L1ME4a LINE L1 -87 6034 5879 801 163 7 7 chr2 67795787 67795922 -185460661 + AluJ SINE Alu 2 136 -176 58 60 0 0 chr2 67795923 67796023 -185460560 + AT_rich Low_complexity Low_complexity 1 100 0 964 168 65 0 chr2 67796023 67796208 -185460375 + AluJ SINE Alu 116 312 0 671 167 8 0 chr2 67796231 67796351 -185460232 + FRAM SINE Alu 56 176 0 310 239 37 19 chr2 67796654 67796765 -185459818 + MIR SINE MIR 2 113 -104 192 176 40 176 chr2 67797533 67797658 -185458925 + MIR SINE MIR 25 132 -76 2266 104 0 0 chr2 67797836 67798145 -185458438 - AluSx SINE Alu -3 309 1 256 257 14 14 chr2 67798325 67798399 -185458184 - LTR67 LTR ERVL -26 531 458 1497 174 14 4 chr2 67798935 67799210 -185457373 - AluJb SINE Alu -34 278 1 447 55 0 0 chr2 67799211 67799266 -185457317 - MST-int LTR MaLR -308 1343 1289 808 156 19 32 chr2 67799269 67799423 -185457160 + MER20 DNA MER1_type 68 219 0 559 108 0 12 chr2 67799758 67799841 -185456742 + MSTA LTR MaLR 1 82 -346 341 128 0 0 chr2 67799862 67799909 -185456674 + MSTA LTR MaLR 382 428 0 4438 171 28 1 chr2 67799909 67800661 -185455922 + MSTA-int LTR MaLR 1 772 -879 2747 92 2 40 chr2 67800662 67800748 -185455835 + MSTA-int LTR MaLR 1194 1282 -298 1646 167 17 0 chr2 67800748 67801041 -185455542 + AluJb SINE Alu 1 298 -14 2747 92 2 40 chr2 67801041 67801356 -185455227 + MSTA-int LTR MaLR 1282 1580 0 1987 147 124 21 chr2 67801356 67801744 -185454839 + MSTA LTR MaLR 1 428 0 800 182 8 0 chr2 67802054 67802186 -185454397 - AluJo SINE Alu -178 134 2 362 297 30 0 chr2 67802335 67802436 -185454147 - MIR SINE MIR -82 180 77 460 134 0 49 chr2 67802509 67802591 -185453992 - AluS SINE Alu -234 79 2 490 138 12 25 chr2 67802625 67802705 -185453878 - FRAM SINE Alu -30 146 68 2936 213 30 60 chr2 67803658 67804543 -185452040 - L1ME1 LINE L1 0 6178 5329 655 255 152 11 chr2 67804672 67804856 -185451727 - MIR SINE MIR 0 262 53 657 180 18 0 chr2 67805449 67805560 -185451023 - MER81 DNA DNA -1 113 1 1524 206 27 35 chr2 67805795 67806163 -185450420 - MLT1A1 LTR MaLR 0 365 1 233 266 110 58 chr2 67806438 67806592 -185449991 - MLT1K LTR MaLR -113 475 314 222 261 31 46 chr2 67806693 67806758 -185449825 + MER91A DNA MER1_type 1 64 -76 266 302 85 8 chr2 67806760 67806889 -185449694 + MIR3 SINE MIR 67 205 -3 273 329 111 46 chr2 67807117 67807370 -185449213 - MIR SINE MIR -1 261 2 40 49 0 0 chr2 67807485 67807546 -185449037 + AT_rich Low_complexity Low_complexity 1 61 0 2189 106 0 0 chr2 67807587 67807880 -185448703 + AluSc SINE Alu 1 293 -16 1109 227 73 78 chr2 67808622 67809032 -185447551 + MLT1I LTR MaLR 2 409 0 536 313 74 9 chr2 67809192 67809422 -185447161 + MIR SINE MIR 1 245 -17 223 236 73 0 chr2 67809534 67809589 -185446994 - L3 LINE CR1 -281 1296 1238 3798 159 32 32 chr2 67809627 67809821 -185446762 + L1MB7 LINE L1 5424 5617 -567 2769 134 19 2 chr2 67809821 67810240 -185446343 + MSTB LTR MaLR 1 426 0 3798 159 32 32 chr2 67810240 67810787 -185445796 + L1MB7 LINE L1 5616 6165 -19 325 237 353 0 chr2 67811336 67811475 -185445108 + MER5A DNA MER1_type 1 188 -1 1515 124 40 4 chr2 67811475 67811725 -185444858 + AluSx SINE Alu 45 303 -9 312 333 50 28 chr2 67811808 67811988 -185444595 + MLT1J LTR MaLR 316 499 -12 227 270 79 0 chr2 67812292 67812355 -185444228 - MLT1L LTR MaLR -80 535 468 2094 120 7 0 chr2 67812368 67812676 -185443907 - AluSq SINE Alu -3 310 1 359 291 155 0 chr2 67812697 67812800 -185443783 - L2 LINE L2 0 3313 3195 335 317 0 0 chr2 67812800 67812942 -185443641 + (TG)n Simple_repeat Simple_repeat 1 142 0 920 300 53 14 chr2 67812944 67813443 -185443140 - L2 LINE L2 -145 3168 2655 307 250 52 43 chr2 67813446 67813562 -185443021 - MLT1L LTR MaLR -169 446 330 427 334 107 31 chr2 67813579 67814028 -185442555 + L2 LINE L2 1181 1663 -1651 332 184 2 0 chr2 67814054 67814118 -185442465 + L1MB5 LINE L1 5860 5924 -246 473 184 211 0 chr2 67814139 67814248 -185442335 - FLAM_C SINE Alu -10 133 2 1367 133 47 51 chr2 67814251 67814469 -185442114 + L1MB5 LINE L1 5913 6130 -44 1809 138 0 11 chr2 67814469 67814752 -185441831 + AluSx SINE Alu 1 280 -32 305 24 24 0 chr2 67814754 67814796 -185441787 + (CATAA)n Simple_repeat Simple_repeat 2 44 0 1367 133 47 51 chr2 67814796 67814829 -185441754 + L1MB5 LINE L1 6131 6166 -8 198 250 278 0 chr2 67814867 67814939 -185441644 + L2 LINE L2 2325 2416 -898 500 324 67 0 chr2 67814942 67815121 -185441462 + MER91A DNA MER1_type 1 191 -5 253 241 144 86 chr2 67815127 67815314 -185441269 + L2 LINE L2 2412 2609 -705 240 35 0 0 chr2 67815711 67815740 -185440843 + (TAA)n Simple_repeat Simple_repeat 2 30 0 516 322 19 19 chr2 67815785 67815993 -185440590 + L2 LINE L2 2667 2874 -440 1188 267 49 3 chr2 67815998 67816324 -185440259 + LTR16B LTR ERVL 4 344 -120 342 290 14 65 chr2 67816404 67816542 -185440041 + L2 LINE L2 2908 3038 -234 * 833 306 18 68 chr2 67816534 67816917 -185439666 - L2 LINE L2 -1 3312 2949 373 305 42 8 chr2 67817193 67817311 -185439272 - MIR SINE MIR 0 262 141 187 268 54 0 chr2 67817357 67817413 -185439170 - MIR SINE MIR -133 129 71 1391 143 0 70 chr2 67817431 67817690 -185438893 + AluJo SINE Alu 1 241 -71 189 322 111 11 chr2 67817751 67817841 -185438742 - MIR3 SINE MIR -11 197 99 458 222 0 0 chr2 67818270 67818360 -185438223 - MIR3 SINE MIR -54 154 65 216 0 0 0 chr2 67818547 67818571 -185438012 + (CTCTG)n Simple_repeat Simple_repeat 2 25 0 203 387 64 0 chr2 67818592 67818765 -185437818 + L2 LINE L2 2702 2885 -429 214 236 167 14 chr2 67818771 67818843 -185437740 + MIR SINE MIR 159 241 -21 180 152 0 0 chr2 67819471 67819504 -185437079 + (TCCA)n Simple_repeat Simple_repeat 4 36 0 318 277 28 78 chr2 67820159 67820300 -185436283 - HAL1b LINE L1 -11 1337 1204 225 0 0 0 chr2 67821042 67821067 -185435516 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 188 302 57 0 chr2 67821216 67821269 -185435314 + L3 LINE CR1 1519 1574 -3 437 245 38 0 chr2 67821287 67821393 -185435190 - L2 LINE L2 0 3313 3204 207 100 0 0 chr2 67822495 67822525 -185434058 + (A)n Simple_repeat Simple_repeat 1 30 0 569 155 0 58 chr2 67822574 67822677 -185433906 + AluJ/FLAM SINE Alu 5 101 -211 39 22 0 0 chr2 67822683 67822729 -185433854 + AT_rich Low_complexity Low_complexity 1 46 0 890 187 10 79 chr2 67822848 67822929 -185433654 + MER5A DNA MER1_type 1 86 -103 1842 149 0 26 chr2 67822929 67823238 -185433345 + AluJb SINE Alu 5 305 -7 890 187 10 79 chr2 67823238 67823359 -185433224 + MER5A DNA MER1_type 86 189 0 2158 96 7 0 chr2 67823640 67823660 -185432923 - AluSq SINE Alu -10 303 285 360 0 0 0 chr2 67823660 67823700 -185432883 + (TG)n Simple_repeat Simple_repeat 1 40 0 2158 96 7 0 chr2 67823700 67823980 -185432603 - AluSq SINE Alu -28 285 1 2157 111 0 7 chr2 67824859 67825157 -185431426 + AluSx SINE Alu 1 296 -16 401 59 118 0 chr2 67825162 67825230 -185431353 + L1MB1 LINE L1 6091 6166 -2 233 226 48 0 chr2 67827037 67827099 -185429484 + MLT1K LTR MaLR 519 583 -5 517 172 41 7 chr2 67827153 67827270 -185429313 - L1MB3 LINE L1 -3 6177 6049 1258 142 18 18 chr2 67827270 67827496 -185429087 - AluJo SINE Alu 0 312 87 929 271 113 10 chr2 67827955 67828247 -185428336 - MLT1I LTR MaLR -3 406 85 682 265 45 40 chr2 67828372 67828588 -185427995 - L2 LINE L2 -1 3312 3096 267 245 0 0 chr2 67828588 67828641 -185427942 + MIR SINE MIR 3 55 -207 887 140 56 39 chr2 67828648 67828775 -185427808 + MER53 DNA DNA 1 133 -56 2169 81 10 32 chr2 67828775 67829084 -185427499 + AluSc SINE Alu 1 302 -7 887 140 56 39 chr2 67829084 67829135 -185427448 + MER53 DNA DNA 133 182 -7 899 220 19 48 chr2 67829160 67829369 -185427214 + MIR SINE MIR 60 262 0 23 0 0 0 chr2 67829513 67829536 -185427047 + AT_rich Low_complexity Low_complexity 1 23 0 557 210 76 25 chr2 67829653 67829824 -185426759 + MLT1J LTR MaLR 45 287 -310 1239 282 47 44 chr2 67830185 67830265 -185426318 - Tigger8 DNA MER2_type -95 571 493 1705 196 14 81 chr2 67830265 67830389 -185426194 + MLT2D LTR ERVL 1 132 -282 1987 139 0 0 chr2 67830389 67830683 -185425900 - AluSx SINE Alu -18 294 1 1705 196 14 81 chr2 67830683 67831002 -185425581 + MLT2D LTR ERVL 132 414 0 1239 282 47 44 chr2 67831002 67831488 -185425095 - Tigger8 DNA MER2_type -173 493 2 1589 181 17 7 chr2 67832286 67832574 -185424009 + AluJo SINE Alu 2 292 -20 519 246 169 88 chr2 67832584 67833076 -185423507 - MLT1G LTR MaLR 0 542 31 1417 147 77 7 chr2 67833076 67833182 -185423401 - L1MB3 LINE L1 -2 6181 6084 333 0 0 0 chr2 67833182 67833219 -185423364 + (TC)n Simple_repeat Simple_repeat 1 37 0 1417 147 77 7 chr2 67833219 67833398 -185423185 - L1MB3 LINE L1 -99 6084 5876 519 246 169 88 chr2 67833398 67833432 -185423151 - MLT1G LTR MaLR -511 31 1 1816 136 7 11 chr2 67833740 67834027 -185422556 + AluJb SINE Alu 1 286 -26 192 40 0 0 chr2 67834033 67834058 -185422525 + (CA)n Simple_repeat Simple_repeat 2 26 0 22 0 0 0 chr2 67834717 67834739 -185421844 + AT_rich Low_complexity Low_complexity 1 22 0 433 298 13 20 chr2 67835196 67835347 -185421236 + ERVL-D LTR ERVL 8 157 -5607 1148 299 59 3 chr2 67835476 67835834 -185420749 + ERVL-D LTR ERVL 324 701 -5063 567 232 9 0 chr2 67835875 67835987 -185420596 + ERVL-D LTR ERVL 854 966 -4798 1191 190 24 70 chr2 67835987 67836057 -185420526 - MLT2B3 LTR ERVL 0 554 482 2270 94 7 0 chr2 67836057 67836366 -185420217 + AluSq SINE Alu 1 311 -2 1191 190 24 70 chr2 67836366 67836698 -185419885 - MLT2B3 LTR ERVL -72 482 176 27 62 0 0 chr2 67836703 67836751 -185419832 + AT_rich Low_complexity Low_complexity 1 48 0 1081 149 20 31 chr2 67836903 67837098 -185419485 - MLT2A2 LTR ERVL -258 195 3 3913 94 11 8 chr2 67837100 67837634 -185418949 - HERVL-A2 LTR ERVL 0 5654 5119 641 295 97 18 chr2 67838077 67838294 -185418289 + MIR SINE MIR 7 240 -22 1900 127 10 7 chr2 67838581 67838873 -185417710 + AluSx SINE Alu 1 293 -19 1999 96 0 4 chr2 67839384 67839655 -185416928 + AluSq SINE Alu 30 299 -14 2247 191 28 39 chr2 67840159 67840667 -185415916 - MLT1D LTR MaLR -3 502 1 735 186 0 0 chr2 67840735 67840859 -185415724 + FLAM_C SINE Alu 2 125 -18 391 262 64 12 chr2 67841125 67841269 -185415314 - MIR SINE MIR -4 258 107 975 240 150 69 chr2 67841446 67842013 -185414570 + MLT1L LTR MaLR 3 615 0 2235 96 0 0 chr2 67842587 67842880 -185413703 + AluSx SINE Alu 1 293 -19 4550 110 100 99 chr2 67842890 67844312 -185412271 + pTR5 LTR ERV1 66 2438 0 315 276 112 9 chr2 67844317 67844433 -185412150 + L1MC4a LINE L1 5783 5910 -1898 381 293 10 0 chr2 67844447 67844546 -185412037 + MER81 DNA DNA 15 114 0 1405 175 10 30 chr2 67845125 67845422 -185411161 + AluJo SINE Alu 1 291 -21 2035 106 6 19 chr2 67845803 67846114 -185410469 - AluSx SINE Alu -5 307 1 27 62 0 0 chr2 67846114 67846162 -185410421 + AT_rich Low_complexity Low_complexity 1 48 0 2046 45 0 48 chr2 67846195 67846463 -185410120 - AluY SINE Alu -56 255 1 915 292 39 63 chr2 67846791 67847280 -185409303 + MLT1J LTR MaLR 27 503 -8 26 0 0 0 chr2 67848120 67848146 -185408437 + AT_rich Low_complexity Low_complexity 1 26 0 232 172 16 16 chr2 67848158 67848222 -185408361 + CT-rich Low_complexity Low_complexity 3 66 0 1668 144 7 11 chr2 67848223 67848500 -185408083 - AluJo SINE Alu -32 280 5 259 274 105 0 chr2 67848652 67848747 -185407836 + L2 LINE L2 3142 3246 -26 3169 138 21 4 chr2 67848840 67849361 -185407222 - L1MC3 LINE L1 -1 7784 7255 622 274 74 6 chr2 67850085 67850260 -185406323 - MIR SINE MIR -10 252 66 191 241 11 103 chr2 67850631 67850718 -185405865 - L2 LINE L2 -9 3263 3185 183 156 0 0 chr2 67851262 67851294 -185405289 + CT-rich Low_complexity Low_complexity 3 34 0 408 88 25 25 chr2 67851298 67851378 -185405205 + (TCCCC)n Simple_repeat Simple_repeat 5 84 0 567 181 0 0 chr2 67851381 67851475 -185405108 - AluJo/FRAM SINE Alu -32 280 187 361 106 0 0 chr2 67851475 67851522 -185405061 + Alu SINE Alu 245 291 -11 29 0 0 0 chr2 67851524 67851553 -185405030 + AT_rich Low_complexity Low_complexity 1 29 0 765 263 23 0 chr2 67851722 67851939 -185404644 - LTR33A LTR ERVL -3 520 299 614 193 21 1 chr2 67852038 67852163 -185404420 - L1M3 LINE L1 -359 5792 5667 269 211 40 0 chr2 67852225 67852301 -185404282 - MER20B DNA MER1_type -59 724 646 1863 109 0 18 chr2 67852363 67852639 -185403944 + AluSx SINE Alu 1 271 -41 186 43 0 0 chr2 67852677 67852700 -185403883 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1440 258 119 11 chr2 67852735 67853173 -185403410 - MER20B DNA MER1_type -292 491 7 977 296 44 68 chr2 67853280 67853653 -185402930 + LTR16B LTR ERVL 66 430 -34 861 147 0 29 chr2 67853653 67853789 -185402794 - FLAM_C SINE Alu 0 133 2 977 296 44 68 chr2 67853789 67853824 -185402759 + LTR16B LTR ERVL 430 464 0 648 223 132 107 chr2 67853912 67854275 -185402308 - MLT1H LTR MaLR -177 372 1 2063 108 0 10 chr2 67855031 67855348 -185401235 + AluSx SINE Alu 1 314 0 398 276 153 38 chr2 67855348 67855739 -185400844 - L1MC4 LINE L1 -7 8035 7600 381 303 9 9 chr2 67855746 67855855 -185400728 + MER5A DNA MER1_type 65 173 -16 184 250 25 0 chr2 67856212 67856252 -185400331 + MER5A DNA MER1_type 55 95 -94 6154 116 35 8 chr2 67857424 67858787 -185397796 - L1MA8 LINE L1 -2 6289 4893 1236 263 21 50 chr2 67858899 67859275 -185397308 + MLT1H1 LTR MaLR 5 369 -186 737 181 9 154 chr2 67859355 67859582 -185397001 + MLT1H1 LTR MaLR 397 590 0 236 196 37 140 chr2 67859600 67859707 -185396876 - MLT1H LTR MaLR 0 549 454 249 313 89 0 chr2 67860726 67860838 -185395745 - L2 LINE L2 -476 2838 2717 870 299 25 4 chr2 67860841 67861082 -185395501 + MLT1J LTR MaLR 17 262 -249 623 372 58 16 chr2 67861162 67861538 -185395045 - L2 LINE L2 -652 2662 2271 371 198 0 12 chr2 67861988 67862069 -185394514 + FLAM_A SINE Alu 54 133 0 675 94 0 0 chr2 67862079 67862175 -185394408 + (GGAA)n Simple_repeat Simple_repeat 1 96 0 26 0 0 0 chr2 67862230 67862256 -185394327 + AT_rich Low_complexity Low_complexity 1 26 0 281 89 22 0 chr2 67862984 67863029 -185393554 + (TCCCC)n Simple_repeat Simple_repeat 2 47 0 30 69 0 0 chr2 67863228 67863286 -185393297 + GC_rich Low_complexity Low_complexity 1 58 0 183 333 0 0 chr2 67865070 67865124 -185391459 - MIR SINE MIR -68 140 87 1245 143 4 46 chr2 67865495 67865667 -185390916 - AluJo SINE Alu -6 306 128 207 0 0 0 chr2 67865667 67865690 -185390893 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2275 49 3 3 chr2 67865690 67865974 -185390609 - AluY SINE Alu -27 284 1 1245 143 4 46 chr2 67865974 67866038 -185390545 - AluJo SINE Alu -182 130 79 350 263 95 20 chr2 67866615 67866756 -185389827 - MIR SINE MIR -63 145 19 434 254 70 0 chr2 67867791 67867905 -185388678 + MIR SINE MIR 73 194 -68 236 356 11 11 chr2 67868340 67868427 -185388156 + MIR3 SINE MIR 115 201 -7 613 122 17 87 chr2 67868819 67868934 -185387649 + U6 snRNA snRNA 1 107 0 858 218 69 0 chr2 67869254 67869442 -185387141 + MIR SINE MIR 12 212 -50 410 234 83 87 chr2 67870196 67870414 -185386169 + MER112 DNA MER1_type 8 224 -36 733 124 39 23 chr2 67870630 67870759 -185385824 - MER3 DNA MER1_type 0 209 79 368 264 23 0 chr2 67870831 67870918 -185385665 + MIR3 SINE MIR 114 202 -6 455 222 44 7 chr2 67871388 67871404 -185385179 - L1MA10 LINE L1 -2 6332 6317 2379 186 78 32 chr2 67871404 67871893 -185384690 - L1ME1 LINE L1 -12 6154 5636 2090 96 13 17 chr2 67871893 67872028 -185384555 + AluSx SINE Alu 1 135 -177 2157 73 0 14 chr2 67872028 67872346 -185384237 + AluY SINE Alu 4 317 0 2090 96 13 17 chr2 67872346 67872510 -185384073 + AluSx SINE Alu 135 300 -12 2379 186 78 32 chr2 67872510 67872574 -185384009 - L1ME1 LINE L1 -530 5636 5576 2139 213 106 31 chr2 67873525 67874064 -185382519 - MLT1E LTR MaLR -14 579 1 869 251 91 22 chr2 67874348 67874868 -185381715 - MER20B DNA MER1_type -13 770 194 872 184 27 0 chr2 67875331 67875478 -185381105 + FRAM SINE Alu 3 153 -13 926 268 54 53 chr2 67875887 67876071 -185380512 - L1ME4a LINE L1 -1 6120 5938 1967 131 0 0 chr2 67876071 67876389 -185380194 + AluSx SINE Alu 1 318 0 926 268 54 53 chr2 67876389 67876637 -185379946 - L1ME4a LINE L1 -183 5938 5686 2493 58 3 0 chr2 67876641 67876949 -185379634 - AluY SINE Alu -2 309 1 1560 159 22 4 chr2 67878306 67878497 -185378086 - AluJb SINE Alu 0 320 120 311 0 26 0 chr2 67878497 67878536 -185378047 + (TTTA)n Simple_repeat Simple_repeat 4 43 0 1560 159 22 4 chr2 67878536 67878659 -185377924 - AluJb SINE Alu -200 120 1 534 213 155 19 chr2 67878664 67878871 -185377712 - MER20B DNA MER1_type -44 739 505 1257 248 132 15 chr2 67878972 67879436 -185377147 - MER20B DNA MER1_type -254 529 12 199 259 52 0 chr2 67879656 67879714 -185376869 - MIR SINE MIR -66 196 136 1646 178 0 29 chr2 67879787 67880096 -185376487 + AluJo SINE Alu 3 302 -10 2223 108 0 0 chr2 67880288 67880593 -185375990 + AluSx SINE Alu 6 310 -2 964 192 41 46 chr2 67880730 67880949 -185375634 + AluJo SINE Alu 1 218 -94 837 251 198 12 chr2 67881135 67881337 -185375246 - L2 LINE L2 0 3313 3150 213 65 0 0 chr2 67881337 67881368 -185375215 + (TG)n Simple_repeat Simple_repeat 1 31 0 837 251 198 12 chr2 67881368 67881488 -185375095 - L2 LINE L2 -163 3150 2931 1967 166 38 0 chr2 67881778 67882151 -185374432 - L1MA4 LINE L1 -11 6289 5903 1623 195 0 10 chr2 67882429 67882736 -185373847 + AluJb SINE Alu 1 304 -8 781 253 100 9 chr2 67882829 67883058 -185373525 - MIR SINE MIR -2 260 11 2161 89 3 46 chr2 67883150 67883477 -185373106 + AluSp SINE Alu 1 313 0 2274 91 0 0 chr2 67884008 67884305 -185372278 - AluSx SINE Alu -15 297 1 428 252 7 58 chr2 67884333 67884472 -185372111 - L3 LINE CR1 -78 1499 1368 2102 109 0 3 chr2 67885348 67885641 -185370942 - AluSq SINE Alu -21 292 1 2237 89 0 0 chr2 67885851 67886142 -185370441 - AluSx SINE Alu -21 291 1 2378 81 0 0 chr2 67886153 67886462 -185370121 - AluY SINE Alu -2 309 1 821 148 7 0 chr2 67886830 67886965 -185369618 + AluJo SINE Alu 1 136 -176 1409 89 103 14 chr2 67886993 67887206 -185369377 - MSTA LTR MaLR 0 428 197 448 73 0 0 chr2 67887206 67887261 -185369322 - MSTA LTR MaLR -373 55 1 2315 85 3 0 chr2 67887289 67887595 -185368988 - AluSp SINE Alu -6 307 1 671 216 0 0 chr2 67887932 67888057 -185368526 - MER58A DNA MER1_type -51 173 49 210 237 0 0 chr2 67888088 67888126 -185368457 + polypurine Low_complexity Low_complexity 4 41 0 567 279 151 11 chr2 67888131 67888403 -185368180 + L1MC4a LINE L1 5030 5339 -807 253 226 0 0 chr2 67888407 67888469 -185368114 + L1MC4a LINE L1 5366 5427 -737 771 282 75 50 chr2 67888491 67888503 -185368080 + L1MC4a LINE L1 5497 5507 -2301 755 177 167 5 chr2 67888503 67888689 -185367894 - MER20B DNA MER1_type -3 216 1 771 282 75 50 chr2 67888689 67888986 -185367597 + L1MC4a LINE L1 5507 5819 -1989 2378 158 41 2 chr2 67888986 67889424 -185367159 + L1MB4 LINE L1 5726 6180 0 771 282 75 50 chr2 67889424 67889489 -185367094 + L1MC4a LINE L1 5819 5881 -1927 250 229 46 73 chr2 67889751 67889860 -185366723 + L1MC4a LINE L1 6074 6179 -1629 197 283 206 0 chr2 67890271 67890363 -185366220 + MIR SINE MIR 41 151 -111 750 185 0 8 chr2 67890884 67891014 -185365569 - FLAM_A SINE Alu 0 133 5 184 174 33 130 chr2 67892460 67892552 -185364031 - L2 LINE L2 -2072 1242 1160 793 281 85 4 chr2 67893376 67893611 -185362972 + MIR SINE MIR 1 254 -8 1798 177 0 0 chr2 67894335 67894640 -185361943 - AluJo SINE Alu -7 305 1 225 31 0 0 chr2 67894683 67894715 -185361868 + Looper DNA T2_type 992 1023 -535 254 160 0 120 chr2 67896475 67896550 -185360033 + MIR SINE MIR 117 182 -80 232 277 10 40 chr2 67897345 67897446 -185359137 + L1MC4 LINE L1 6616 6713 -1329 437 192 108 23 chr2 67898884 67899014 -185357569 + MIR SINE MIR 6 146 -116 1388 194 10 31 chr2 67899014 67899308 -185357275 + AluJo SINE Alu 1 288 -24 33 25 0 0 chr2 67899308 67899348 -185357235 + AT_rich Low_complexity Low_complexity 1 40 0 1638 95 0 5 chr2 67899358 67899579 -185357004 + AluSx SINE Alu 1 220 -92 198 0 0 0 chr2 67899582 67899604 -185356979 + (A)n Simple_repeat Simple_repeat 1 22 0 275 295 74 11 chr2 67899715 67899810 -185356773 - MER91C DNA MER1_type -39 101 1 385 254 239 0 chr2 67900281 67900423 -185356160 + L1ME3A LINE L1 5945 6120 -50 1814 118 0 14 chr2 67900427 67900707 -185355876 - AluSx SINE Alu -16 296 21 372 219 0 0 chr2 67900914 67900978 -185355605 + MER58 DNA MER1_type 5 68 -2352 426 226 0 0 chr2 67901044 67901128 -185355455 - ORSL DNA AcHobo 0 275 192 806 219 0 0 chr2 67901129 67901275 -185355308 - FRAM SINE Alu -16 150 5 374 198 19 57 chr2 67902100 67902206 -185354377 + MIR3 SINE MIR 79 180 -28 705 209 80 0 chr2 67902306 67902469 -185354114 + MER5B DNA MER1_type 3 178 0 193 304 54 22 chr2 67902469 67902555 -185354028 + MER5A DNA MER1_type 99 187 -2 2001 100 33 0 chr2 67902744 67903014 -185353569 + AluSx SINE Alu 1 279 -33 2224 105 0 0 chr2 67903180 67903486 -185353097 - AluSg SINE Alu -4 306 1 324 287 29 88 chr2 67903667 67903803 -185352780 - MER5B DNA MER1_type 0 178 51 1694 174 7 7 chr2 67903836 67904124 -185352459 + AluJb SINE Alu 1 288 -24 2032 92 7 11 chr2 67904257 67904574 -185352009 + AluSx SINE Alu 1 316 0 236 255 31 31 chr2 67905358 67905456 -185351127 - LTR67 LTR ERVL -54 503 406 828 298 104 48 chr2 67905802 67906360 -185350223 + Tigger8 DNA MER2_type 70 658 -8 207 0 0 0 chr2 67907007 67907030 -185349553 + (TGGGGG)n Simple_repeat Simple_repeat 2 24 0 267 29 0 0 chr2 67907037 67907055 -185349528 + (GA)n Simple_repeat Simple_repeat 1 21 -13 2033 88 3 83 chr2 67907055 67907394 -185349189 + AluSx SINE Alu 1 312 0 267 29 0 0 chr2 67907394 67907409 -185349174 + (GA)n Simple_repeat Simple_repeat 20 34 0 548 162 291 0 chr2 67907666 67907783 -185348800 + MER5A DNA MER1_type 37 187 -2 2195 98 0 0 chr2 67907919 67908254 -185348329 - AluSq SINE Alu 0 335 1 1100 253 173 9 chr2 67908255 67908678 -185347905 - L2 LINE L2 -389 2925 2434 2140 96 3 32 chr2 67908919 67909232 -185347351 - AluSx SINE Alu -8 304 1 237 233 22 67 chr2 67909662 67909752 -185346831 - L2 LINE L2 -12 3301 3216 2135 116 0 3 chr2 67910102 67910405 -185346178 - AluSq SINE Alu -11 302 1 24 53 0 0 chr2 67910441 67910479 -185346104 + AT_rich Low_complexity Low_complexity 1 38 0 2010 112 28 0 chr2 67910661 67910948 -185345635 - AluSx SINE Alu -17 295 1 518 290 158 46 chr2 67911551 67911998 -185344585 + L2 LINE L2 2438 2998 -315 1907 132 4 0 chr2 67911998 67912302 -185344281 + AluSx SINE Alu 1 305 0 518 290 158 46 chr2 67912302 67912517 -185344066 + L2 LINE L2 2998 3188 -125 1775 136 25 11 chr2 67912522 67912808 -185343775 + AluJb SINE Alu 5 294 -18 245 257 44 88 chr2 67912955 67913068 -185343515 + MLT1K LTR MaLR 37 144 -444 2063 120 3 3 chr2 67913131 67913440 -185343143 + AluSx SINE Alu 1 309 -3 416 188 0 12 chr2 67913566 67913646 -185342937 - LTR33 LTR ERVL 0 521 443 890 116 82 20 chr2 67913646 67913792 -185342791 + FRAM SINE Alu 9 163 -13 473 269 62 0 chr2 67914013 67914158 -185342425 - LTR33 LTR ERVL -367 154 1 279 286 34 54 chr2 67914206 67914353 -185342230 + MLT1K LTR MaLR 385 528 -60 281 302 44 19 chr2 67914430 67914589 -185341994 - L2 LINE L2 -292 2980 2818 22 56 0 0 chr2 67915073 67915109 -185341474 + AT_rich Low_complexity Low_complexity 1 36 0 1782 125 0 0 chr2 67915288 67915552 -185341031 + AluSx SINE Alu 34 297 -15 570 268 36 62 chr2 67915556 67915750 -185340833 - MIR SINE MIR -72 190 2 478 231 27 27 chr2 67916073 67916220 -185340363 + L1ME LINE L1 5571 5717 -404 1415 174 57 7 chr2 67916264 67916393 -185340190 + AluJo SINE Alu 1 122 -190 189 0 0 0 chr2 67916393 67916414 -185340169 + (TTAAA)n Simple_repeat Simple_repeat 3 23 0 1415 174 57 7 chr2 67916414 67916565 -185340018 + AluJo SINE Alu 122 295 -17 2282 92 0 0 chr2 67916571 67916877 -185339706 + AluSg SINE Alu 1 306 -4 22 0 0 0 chr2 67916877 67916899 -185339684 + AT_rich Low_complexity Low_complexity 1 22 0 208 274 87 66 chr2 67917676 67917832 -185338751 + L2 LINE L2 2149 2313 -1001 2087 114 3 0 chr2 67917832 67918140 -185338443 + AluY SINE Alu 1 309 -2 208 274 87 66 chr2 67918140 67918224 -185338359 + L2 LINE L2 2313 2394 -920 3351 131 20 17 chr2 67918308 67918850 -185337733 - LTR10A LTR ERV1 -65 544 1 9578 231 26 25 chr2 67918851 67921005 -185335578 - LTR10A-int LTR ERV1 -2 6647 4491 284 174 0 0 chr2 67921005 67921051 -185335532 + LTR10C LTR ERV1 546 591 0 204 298 0 0 chr2 67921512 67921559 -185335024 + polypyrimidine Low_complexity Low_complexity 4 50 0 201 74 0 0 chr2 67921579 67921606 -185334977 + (T)n Simple_repeat Simple_repeat 1 27 0 1509 205 145 90 chr2 67921918 67922461 -185334122 - MLT1E LTR MaLR 0 593 1 639 264 26 92 chr2 67922461 67922575 -185334008 - L1MC4 LINE L1 -78 7964 7844 2359 102 76 15 chr2 67922575 67922918 -185333665 + THE1B LTR MaLR 1 364 0 639 264 26 92 chr2 67922918 67923268 -185333315 - L1MC4 LINE L1 -198 7844 7531 2200 135 34 9 chr2 67923406 67923755 -185332828 - LTR45B LTR ERV1 -131 358 1 250 235 94 12 chr2 67923758 67923843 -185332740 - L1MC5 LINE L1 -534 7427 7336 855 228 64 59 chr2 67923868 67924289 -185332294 - L1MC4 LINE L1 -621 7421 6999 292 207 50 14 chr2 67924302 67924442 -185332141 + (TA)n Simple_repeat Simple_repeat 1 145 0 246 189 67 122 chr2 67924534 67924594 -185331989 - L1MC4 LINE L1 -1023 7019 6964 1939 124 29 16 chr2 67924594 67924900 -185331683 + AluSx SINE Alu 1 310 -2 246 189 67 122 chr2 67924900 67924929 -185331654 - L1MC4 LINE L1 -1078 6964 6935 3636 169 53 55 chr2 67924938 67925575 -185331008 - L1MB8 LINE L1 -6 6172 5541 941 217 0 0 chr2 67925575 67925741 -185330842 - AluJo SINE Alu 0 302 137 3636 169 53 55 chr2 67925741 67925996 -185330587 - L1MB8 LINE L1 -637 5541 5287 1883 140 6 16 chr2 67926508 67926823 -185329760 + AluSx SINE Alu 1 312 0 28 0 0 0 chr2 67927188 67927216 -185329367 + AT_rich Low_complexity Low_complexity 1 28 0 861 293 104 36 chr2 67927391 67927862 -185328721 + ERVL LTR ERVL 4916 5418 -346 315 251 52 126 chr2 67928210 67928401 -185328182 + LTR67 LTR ERVL 20 196 -361 398 276 61 73 chr2 67928501 67928747 -185327836 - MLT1K LTR MaLR -204 384 142 334 288 12 0 chr2 67928873 67928953 -185327630 - MIR3 SINE MIR -4 204 124 843 126 0 0 chr2 67929585 67929704 -185326879 + FLAM_C SINE Alu 5 123 -20 23 33 0 0 chr2 67930675 67930705 -185325878 + GC_rich Low_complexity Low_complexity 1 30 0 295 232 0 0 chr2 67931671 67931727 -185324856 + L2 LINE L2 3237 3292 -21 768 131 25 8 chr2 67931890 67932012 -185324571 - AluJo SINE Alu -171 141 18 663 238 31 6 chr2 67932017 67932177 -185324406 + MIR SINE MIR 97 260 -2 1293 167 13 4 chr2 67932290 67932518 -185324065 - AluJo SINE Alu -23 289 60 2368 113 0 0 chr2 67932571 67932880 -185323703 - AluSq SINE Alu -4 309 1 494 227 175 7 chr2 67933792 67933946 -185322637 - MER5A DNA MER1_type 0 189 10 884 137 0 0 chr2 67934521 67934652 -185321931 + FLAM_C SINE Alu 1 131 -2 2339 94 17 0 chr2 67934968 67935267 -185321316 + AluSx SINE Alu 1 304 -8 2150 127 3 0 chr2 67936325 67936625 -185319958 + AluSx SINE Alu 1 301 -11 2053 139 0 3 chr2 67936627 67936921 -185319662 + AluSx SINE Alu 1 293 -19 2545 70 0 0 chr2 67938526 67938828 -185317755 + AluY SINE Alu 1 302 -9 940 261 84 39 chr2 67939203 67939507 -185317076 + L1MC4a LINE L1 5505 5794 -2014 2966 166 14 60 chr2 67939507 67939760 -185316823 - MER6A DNA MER2_type -260 605 342 2042 126 45 0 chr2 67939760 67940046 -185316537 + AluSx SINE Alu 1 299 -13 2966 166 14 60 chr2 67940046 67940388 -185316195 - MER6A DNA MER2_type -523 342 -14 2298 98 0 10 chr2 67940388 67940521 -185316062 + AluSg SINE Alu 1 134 -176 2431 89 0 19 chr2 67940521 67940819 -185315764 + AluSg1 SINE Alu 1 294 -15 207 0 0 0 chr2 67940819 67940842 -185315741 + (TA)n Simple_repeat Simple_repeat 1 23 0 2431 89 0 19 chr2 67940842 67940858 -185315725 + AluSg1 SINE Alu 294 309 0 2298 98 0 10 chr2 67940858 67941019 -185315564 + AluSg SINE Alu 134 292 -18 2966 166 14 60 chr2 67941019 67941056 -185315527 - MER6A DNA MER2_type -878 4294967283 1 940 261 84 39 chr2 67941056 67941165 -185315418 + L1MC4a LINE L1 5794 5937 -1871 1945 124 21 21 chr2 67941175 67941457 -185315126 + AluSx SINE Alu 1 282 -30 200 319 56 0 chr2 67941691 67941763 -185314820 - MIR SINE MIR -1 261 186 1726 102 0 4 chr2 67942702 67942927 -185313656 + AluJb SINE Alu 85 308 -4 219 274 189 0 chr2 67944432 67944527 -185312056 + MIR3 SINE MIR 81 193 -15 323 333 0 10 chr2 67944909 67945005 -185311578 - MIR SINE MIR -166 96 2 619 224 121 43 chr2 67947123 67947355 -185309228 - MIR SINE MIR -1 261 12 350 175 16 0 chr2 67947416 67947479 -185309104 + MER103 DNA DNA 20 83 -83 203 223 204 10 chr2 67947657 67947760 -185308823 + MIR SINE MIR 90 212 -50 625 202 0 8 chr2 67948734 67948858 -185307725 + FLAM_A SINE Alu 3 125 -8 655 243 0 14 chr2 67948981 67949125 -185307458 - MER3 DNA MER1_type -65 144 3 1402 145 103 46 chr2 67949208 67949490 -185307093 + AluJb SINE Alu 1 298 -14 487 148 57 0 chr2 67949629 67949717 -185306866 - MER94 DNA DNA -34 100 8 875 149 0 43 chr2 67950862 67951003 -185305580 + AluJo SINE Alu 1 135 -177 2504 75 0 7 chr2 67951072 67951377 -185305206 - AluSp SINE Alu -10 303 1 457 161 0 0 chr2 68002442 68002533 -185254050 + AluSg/x SINE Alu 217 307 0 2273 104 3 7 chr2 68002570 68002869 -185253714 - AluSx SINE Alu -14 298 1 22 0 0 0 chr2 68003035 68003057 -185253526 + AT_rich Low_complexity Low_complexity 1 22 0 832 147 0 23 chr2 68003348 68003477 -185253106 + FLAM_C SINE Alu 1 126 -7 962 168 0 40 chr2 68003782 68003955 -185252628 + FRAM SINE Alu 1 166 0 27 29 0 0 chr2 68004780 68004814 -185251769 + AT_rich Low_complexity Low_complexity 1 34 0 2195 159 35 45 chr2 68004915 68004984 -185251599 + MSTD LTR MaLR 4 72 -324 2823 13 0 6 chr2 68004984 68005297 -185251286 + AluYb8 SINE Alu 1 311 -7 2195 159 35 45 chr2 68005297 68005624 -185250959 + MSTD LTR MaLR 72 396 0 21 0 0 0 chr2 68005992 68006013 -185250570 + AT_rich Low_complexity Low_complexity 1 21 0 2154 131 0 10 chr2 68006296 68006610 -185249973 + AluSx SINE Alu 1 311 -1 487 266 62 70 chr2 68006782 68007023 -185249560 + MIR SINE MIR 24 262 0 1522 186 18 11 chr2 68007506 68007786 -185248797 - AluJo SINE Alu -30 282 1 851 172 8 0 chr2 68007786 68007920 -185248663 - AluJo SINE Alu -177 135 1 1915 158 0 13 chr2 68007990 68008293 -185248290 - AluJb SINE Alu -13 299 1 443 319 80 0 chr2 68008373 68008511 -185248072 + MIR SINE MIR 49 197 -65 1971 134 3 3 chr2 68008886 68009200 -185247383 - AluSx SINE Alu 0 312 1 1577 165 13 65 chr2 68009329 68009638 -185246945 + AluJb SINE Alu 1 293 -19 2093 81 0 4 chr2 68009646 68009907 -185246676 + AluSq SINE Alu 1 260 -53 675 124 0 0 chr2 68009908 68010013 -185246570 + AluSg/x SINE Alu 205 309 0 861 167 0 0 chr2 68010146 68010278 -185246305 + FLAM_C SINE Alu 2 133 0 40 0 0 0 chr2 68010278 68010318 -185246265 + AT_rich Low_complexity Low_complexity 1 40 0 2242 105 3 3 chr2 68010598 68010903 -185245680 + AluSg SINE Alu 1 305 -5 1602 157 78 4 chr2 68011396 68011677 -185244906 + AluJo SINE Alu 1 302 -10 2289 113 10 0 chr2 68012299 68012608 -185243975 + AluSx SINE Alu 1 312 0 1610 158 10 59 chr2 68012689 68012992 -185243591 + AluJo SINE Alu 1 288 -24 2211 100 20 3 chr2 68013117 68013418 -185243165 + AluY SINE Alu 1 306 -5 2086 120 0 16 chr2 68013697 68014006 -185242577 - AluSp SINE Alu -9 304 1 931 186 98 0 chr2 68014408 68014601 -185241982 - MER20 DNA MER1_type 0 219 8 2348 82 3 0 chr2 68015016 68015308 -185241275 + AluSp SINE Alu 3 295 -18 2301 93 3 0 chr2 68015701 68016002 -185240581 + AluSq SINE Alu 3 304 -9 2319 93 0 3 chr2 68016091 68016393 -185240190 + AluSx SINE Alu 1 301 -11 2223 94 10 16 chr2 68016854 68017162 -185239421 - AluSp SINE Alu -7 306 1 2438 61 0 14 chr2 68020689 68020986 -185235597 + AluY SINE Alu 1 293 -18 1778 154 14 10 chr2 68024382 68024674 -185231909 - AluJb SINE Alu -19 293 1 2317 100 0 0 chr2 68024865 68025165 -185231418 - AluSx SINE Alu -12 300 1 1645 191 10 0 chr2 68026693 68026987 -185229596 - AluJo SINE Alu -15 297 1 2088 119 27 0 chr2 68027155 68027450 -185229133 + AluSg SINE Alu 1 303 -7 306 308 172 30 chr2 68027484 68027682 -185228901 + MIR SINE MIR 23 248 -14 711 164 16 31 chr2 68027810 68027922 -185228661 - FLAM_A SINE Alu -185 126 15 1654 184 88 28 chr2 68027922 68028276 -185228307 + THE1C LTR MaLR 1 375 0 711 164 16 31 chr2 68028276 68028291 -185228292 - FLAM_A SINE Alu -296 15 1 331 311 113 73 chr2 68028541 68028787 -185227796 + L3 LINE CR1 587 821 -756 2244 88 7 7 chr2 68028787 68029084 -185227499 - AluSg SINE Alu -13 297 1 331 311 113 73 chr2 68029084 68029135 -185227448 + L3 LINE CR1 821 868 -709 1863 165 3 3 chr2 68029135 68029432 -185227151 - AluJb SINE Alu -15 297 1 331 311 113 73 chr2 68029432 68029465 -185227118 + L3 LINE CR1 868 898 -679 2545 64 3 0 chr2 68029465 68029776 -185226807 + AluSp SINE Alu 1 312 -1 331 311 113 73 chr2 68029776 68030201 -185226382 + L3 LINE CR1 898 1375 -202 310 213 93 13 chr2 68030224 68030299 -185226284 + AluS SINE Alu 221 301 -1 817 189 0 8 chr2 68030363 68030495 -185226088 - FLAM_C SINE Alu -10 133 3 1469 172 7 58 chr2 68030517 68030825 -185225758 - AluJo SINE Alu -20 292 1 2113 120 0 31 chr2 68030893 68031033 -185225550 + AluSx SINE Alu 3 146 -166 2288 99 0 3 chr2 68031033 68031327 -185225256 + AluSg SINE Alu 1 293 -17 2113 120 0 31 chr2 68031327 68031503 -185225080 + AluSx SINE Alu 146 309 -3 2090 153 135 19 chr2 68033696 68033995 -185222588 - L1MB5 LINE L1 0 6174 5911 1886 165 0 3 chr2 68033995 68034298 -185222285 - AluSx SINE Alu -10 302 1 2090 153 135 19 chr2 68034298 68034496 -185222087 - L1MB5 LINE L1 -263 5911 5625 441 227 0 11 chr2 68034665 68034753 -185221830 + MER3 DNA MER1_type 1 87 -122 709 204 62 37 chr2 68034772 68034934 -185221649 - FRAM SINE Alu -2 174 9 385 164 27 0 chr2 68034934 68035007 -185221576 + MER3 DNA MER1_type 135 209 0 331 278 58 58 chr2 68035008 68035141 -185221442 + L1MC5 LINE L1 7331 7488 -473 23 0 0 0 chr2 68035141 68035164 -185221419 + AT_rich Low_complexity Low_complexity 1 23 0 331 278 58 58 chr2 68035164 68035213 -185221370 + L1MC5 LINE L1 7487 7535 -426 2260 115 0 3 chr2 68035281 68035585 -185220998 + AluSg SINE Alu 1 303 -7 2112 125 7 3 chr2 68035639 68035944 -185220639 + AluSx SINE Alu 1 306 -6 2176 140 0 0 chr2 68036025 68036332 -185220251 + AluSx SINE Alu 1 307 -5 2520 72 10 0 chr2 68036904 68037208 -185219375 - AluSp SINE Alu -6 307 1 1007 185 72 105 chr2 68037529 68037809 -185218774 - Charlie1a DNA MER1_type -1999 762 497 2282 115 0 0 chr2 68037809 68038104 -185218479 + AluSg SINE Alu 3 297 -13 1007 185 72 105 chr2 68038104 68038223 -185218360 - Charlie1a DNA MER1_type -2264 497 376 1217 175 84 20 chr2 68038225 68038476 -185218107 + AluJo SINE Alu 31 297 -15 1144 171 48 157 chr2 68038479 68038900 -185217683 - Charlie1a DNA MER1_type -1074 381 7 2518 62 7 3 chr2 68038934 68039239 -185217344 - AluSc SINE Alu -3 306 1 689 194 0 16 chr2 68039395 68039519 -185217064 - FLAM_A SINE Alu -7 126 5 2428 94 0 19 chr2 68040384 68040702 -185215881 + AluSq SINE Alu 1 312 -1 2379 73 3 0 chr2 68040931 68041219 -185215364 - AluSg SINE Alu -19 291 3 247 163 0 0 chr2 68042032 68042075 -185214508 - Alu SINE Alu -3 297 255 1054 116 0 0 chr2 68042076 68042214 -185214369 - AluSq/x SINE Alu -175 138 1 2071 138 7 7 chr2 68042221 68042526 -185214057 - AluSx SINE Alu -7 305 1 871 102 16 8 chr2 68042658 68042786 -185213797 - AluSg/x SINE Alu -20 292 164 1481 135 33 12 chr2 68042989 68043234 -185213349 + AluSq SINE Alu 50 299 -14 1883 99 27 4 chr2 68043282 68043545 -185213038 + AluSq SINE Alu 42 310 -3 2161 125 3 10 chr2 68043683 68043987 -185212596 + AluSq SINE Alu 1 302 -11 2332 104 0 19 chr2 68044583 68044900 -185211683 + AluSx SINE Alu 1 311 -1 987 184 187 56 chr2 68045251 68045321 -185211262 + L1MD3 LINE L1 6794 6853 -1005 2316 74 7 7 chr2 68045321 68045617 -185210966 + AluSc SINE Alu 1 296 -13 987 184 187 56 chr2 68045617 68045813 -185210770 + L1MD3 LINE L1 6853 7022 -836 1697 156 19 53 chr2 68045813 68046134 -185210449 + AluJo SINE Alu 2 311 -1 987 184 187 56 chr2 68046134 68046241 -185210342 + L1MD3 LINE L1 7022 7268 -590 1968 148 3 3 chr2 68046241 68046539 -185210044 + AluSx SINE Alu 1 298 -14 1762 162 56 38 chr2 68046540 68046934 -185209649 + L1MD3 LINE L1 7595 7995 0 1954 101 16 0 chr2 68046966 68047223 -185209360 + AluSx SINE Alu 1 261 -51 2390 43 11 0 chr2 68047327 68047603 -185208980 - AluY SINE Alu -11 300 22 1953 122 42 0 chr2 68047707 68047993 -185208590 + AluSg SINE Alu 1 298 -12 1900 136 27 3 chr2 68048141 68048436 -185208147 - AluSx SINE Alu -10 302 1 424 127 14 0 chr2 68048498 68048569 -185208014 + FLAM SINE Alu 54 125 -18 2001 147 3 0 chr2 68048602 68048902 -185207681 - AluSx SINE Alu -11 301 1 2169 111 37 0 chr2 68049571 68049869 -185206714 - AluSx SINE Alu -3 309 1 1892 107 15 4 chr2 68050020 68050282 -185206301 - AluSx SINE Alu -4 308 44 1323 133 0 0 chr2 68050311 68050499 -185206084 + AluSg/x SINE Alu 123 310 0 401 94 0 0 chr2 68050516 68050569 -185206014 + Alu SINE Alu 1 53 -259 277 109 0 0 chr2 68050569 68050615 -185205968 + Alu SINE Alu 256 301 -1 2183 83 21 3 chr2 68051606 68051894 -185204689 + AluSp SINE Alu 2 294 -19 2369 65 0 3 chr2 68051897 68052189 -185204394 - AluY SINE Alu -20 291 1 199 298 48 19 chr2 68052314 68052418 -185204165 - MIR SINE MIR -72 190 84 234 156 0 0 chr2 68054080 68054125 -185202458 + (CCG)n Simple_repeat Simple_repeat 2 46 0 254 270 29 29 chr2 68054640 68054777 -185201806 + G-rich Low_complexity Low_complexity 1 137 0 2140 119 10 0 chr2 68055882 68056175 -185200408 + AluSg SINE Alu 1 296 -14 261 0 0 0 chr2 68056210 68056239 -185200344 + (CA)n Simple_repeat Simple_repeat 1 29 0 2224 79 0 51 chr2 68056370 68056685 -185199898 + AluSc SINE Alu 2 300 -9 1036 226 135 84 chr2 68056804 68057006 -185199577 - MER34C LTR ERV1 0 585 395 2290 87 0 13 chr2 68057006 68057306 -185199277 + AluY SINE Alu 1 296 -15 1036 226 135 84 chr2 68057306 68057317 -185199266 - MER34C LTR ERV1 -190 395 386 1986 133 0 36 chr2 68057317 68057459 -185199124 + AluSx SINE Alu 2 148 -164 2189 107 17 10 chr2 68057459 68057758 -185198825 + AluSx SINE Alu 1 301 -11 1986 133 0 36 chr2 68057758 68057923 -185198660 + AluSx SINE Alu 148 298 -14 1036 226 135 84 chr2 68057923 68058265 -185198318 - MER34C LTR ERV1 -199 386 1 2043 108 0 24 chr2 68058535 68058854 -185197729 - AluSx SINE Alu 0 312 1 21 0 0 0 chr2 68058855 68058876 -185197707 + AT_rich Low_complexity Low_complexity 1 21 0 407 225 0 26 chr2 68059253 68059351 -185197232 + L1ME1 LINE L1 5934 6025 -141 1347 161 18 0 chr2 68059354 68059571 -185197012 - AluJo SINE Alu -7 305 85 391 176 0 182 chr2 68059571 68059671 -185196912 + L1ME1 LINE L1 6024 6084 -82 2218 111 0 0 chr2 68059671 68059959 -185196624 + AluSx SINE Alu 1 288 -24 391 176 0 182 chr2 68059959 68060023 -185196560 + L1ME1 LINE L1 6084 6158 -8 2298 95 3 0 chr2 68060024 68060319 -185196264 + AluSg SINE Alu 1 296 -14 1906 152 7 17 chr2 68060330 68060626 -185195957 + AluJb SINE Alu 1 293 -19 2157 120 0 3 chr2 68060999 68061300 -185195283 - AluSg SINE Alu -10 300 1 691 144 0 53 chr2 68061377 68061553 -185195030 + FLAM_C SINE Alu 1 143 0 651 243 44 98 chr2 68061886 68062327 -185194256 - MER67D LTR ERV1 0 543 105 486 0 0 0 chr2 68062327 68062381 -185194202 + (TA)n Simple_repeat Simple_repeat 2 55 0 2200 90 17 0 chr2 68062397 68062685 -185193898 + AluSp SINE Alu 1 293 -20 709 181 0 0 chr2 68062694 68062810 -185193773 - AluJb SINE Alu -195 117 2 426 205 27 62 chr2 68062813 68062925 -185193658 - MER67B LTR ERV1 -409 252 145 1922 149 19 7 chr2 68062932 68063240 -185193343 - AluJb SINE Alu 0 312 1 183 336 7 58 chr2 68063360 68063497 -185193086 + L2 LINE L2 2970 3099 -173 2152 74 42 3 chr2 68063567 68063850 -185192733 + AluSp SINE Alu 1 294 -19 941 164 62 17 chr2 68063850 68064027 -185192556 - MER3 DNA MER1_type -20 189 5 283 308 50 25 chr2 68064049 68064208 -185192375 + L2 LINE L2 3141 3303 -10 2368 103 0 0 chr2 68064232 68064534 -185192049 - AluSq SINE Alu -11 302 1 2026 127 0 13 chr2 68064661 68064960 -185191623 + AluSx SINE Alu 1 295 -17 2177 127 3 0 chr2 68065393 68065693 -185190890 + AluSx SINE Alu 1 301 -11 1940 104 80 0 chr2 68066020 68066307 -185190276 + AluSq SINE Alu 1 310 -3 1108 134 23 12 chr2 68066307 68066478 -185190105 + AluSg/x SINE Alu 124 296 -14 635 213 140 0 chr2 68066489 68066639 -185189944 + FAM SINE Alu 2 172 -3 241 247 144 10 chr2 68067300 68067397 -185189186 - L2 LINE L2 0 3313 3204 2153 139 3 0 chr2 68067417 68067712 -185188871 + AluSx SINE Alu 1 296 -16 1643 192 53 68 chr2 68067865 68068236 -185188347 - MER110A LTR ERV1 -3 465 135 2239 95 0 14 chr2 68068236 68068530 -185188053 - AluSq SINE Alu -21 292 3 1643 192 53 68 chr2 68068530 68068639 -185187944 - MER110A LTR ERV1 -333 135 26 428 333 73 14 chr2 68068761 68068980 -185187603 - L2 LINE L2 -195 3077 2846 411 97 16 16 chr2 68069019 68069081 -185187502 - LTR49 LTR ERV1 0 595 534 1973 116 55 7 chr2 68069083 68069376 -185187207 + AluSg SINE Alu 2 308 -2 2367 101 3 0 chr2 68069451 68069758 -185186825 + AluSc SINE Alu 1 308 -1 300 53 0 0 chr2 68069777 68069815 -185186768 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 1930 113 0 12 chr2 68069816 68070072 -185186511 - AluSx SINE Alu -59 253 1 21 0 0 0 chr2 68070256 68070277 -185186306 + AT_rich Low_complexity Low_complexity 1 21 0 2122 126 0 13 chr2 68071260 68071562 -185185021 - AluSx SINE Alu -14 298 1 482 173 10 0 chr2 68071640 68071744 -185184839 + GA-rich Low_complexity Low_complexity 4 108 0 239 80 200 0 chr2 68071823 68071920 -185184663 - Alu SINE Alu 0 348 242 231 61 0 0 chr2 68071945 68071978 -185184605 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 1604 121 57 50 chr2 68071978 68072117 -185184466 - AluJo SINE Alu -29 283 146 267 31 0 0 chr2 68072117 68072149 -185184434 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 2117 121 3 0 chr2 68072150 68072432 -185184151 - AluSp SINE Alu -30 283 1 1604 121 57 50 chr2 68072432 68072571 -185184012 - AluJo SINE Alu -165 147 1 1128 168 79 0 chr2 68072642 68072844 -185183739 - MER20 DNA MER1_type -1 218 1 715 137 0 48 chr2 68072981 68073105 -185183478 - FLAM_C SINE Alu -10 133 16 2319 83 17 0 chr2 68073308 68073610 -185182973 - AluY SINE Alu -4 307 1 2083 121 3 17 chr2 68073771 68074069 -185182514 + AluSx SINE Alu 1 294 -18 2613 147 12 37 chr2 68074130 68074441 -185182142 + L1MB3 LINE L1 5705 6002 -181 2051 127 0 0 chr2 68074441 68074747 -185181836 - AluSx SINE Alu 0 306 1 2613 147 12 37 chr2 68074747 68074923 -185181660 + L1MB3 LINE L1 6002 6181 -2 759 174 0 0 chr2 68076188 68076309 -185180274 - FLAM_C SINE Alu -12 121 1 719 256 0 45 chr2 68076376 68076575 -185180008 - MIR SINE MIR -71 191 2 2341 116 0 0 chr2 68076600 68076910 -185179673 + AluSx SINE Alu 1 310 -2 2428 66 0 13 chr2 68077066 68077368 -185179215 + AluY SINE Alu 1 298 -13 3488 140 2 19 chr2 68077449 68077985 -185178598 - MER1A DNA MER1_type 0 527 1 373 310 35 0 chr2 68078093 68078209 -185178374 + L2 LINE L2 3194 3313 0 622 131 10 0 chr2 68078603 68078702 -185177881 + MER5A DNA MER1_type 10 109 -80 566 178 0 0 chr2 68078875 68078976 -185177607 - AluSg/x SINE Alu -3 309 209 2266 90 0 0 chr2 68078977 68079254 -185177329 - AluSx SINE Alu -35 277 1 2297 101 0 3 chr2 68079265 68079563 -185177020 - AluSq SINE Alu -14 299 3 956 182 6 6 chr2 68079677 68079842 -185176741 - AluJo SINE Alu -30 282 118 2290 106 0 0 chr2 68079866 68080158 -185176425 - AluSq SINE Alu -21 292 1 379 174 98 0 chr2 68080163 68080255 -185176328 - L1MDa LINE L1 -3961 2579 2479 184 333 192 0 chr2 68080559 68080637 -185175946 + L2 LINE L2 3125 3217 -55 473 230 24 0 chr2 68080697 68080823 -185175760 - L1MC4 LINE L1 0 8042 7914 1841 152 20 10 chr2 68081013 68081309 -185175274 + AluJb SINE Alu 1 299 -13 2526 37 17 7 chr2 68081643 68081942 -185174641 - AluY SINE Alu -9 302 1 2246 118 3 0 chr2 68082166 68082470 -185174113 + AluSx SINE Alu 1 305 -7 2120 117 10 3 chr2 68083032 68083323 -185173260 + AluSx SINE Alu 1 293 -19 813 167 8 0 chr2 68083368 68083500 -185173083 - FLAM_C SINE Alu 0 133 1 1971 138 3 16 chr2 68083524 68083836 -185172747 - AluJb SINE Alu -4 308 1 1620 240 108 71 chr2 68083909 68084454 -185172129 - L2 LINE L2 -4 3309 2785 2202 99 3 23 chr2 68084454 68084757 -185171826 + AluSx SINE Alu 1 297 -15 1620 240 108 71 chr2 68084757 68084769 -185171814 - L2 LINE L2 -528 2785 2775 2361 67 0 70 chr2 68084769 68085098 -185171485 + AluY SINE Alu 4 309 -2 1620 240 108 71 chr2 68085098 68085591 -185170992 - L2 LINE L2 -538 2775 2213 790 144 0 0 chr2 68085749 68085867 -185170716 - FLAM_C SINE Alu -15 118 1 256 207 74 50 chr2 68085995 68086116 -185170467 - L2 LINE L2 -1123 2191 2068 2134 144 0 0 chr2 68086160 68086472 -185170111 - AluSq SINE Alu -1 312 1 1988 141 29 10 chr2 68086701 68087007 -185169576 + AluJb SINE Alu 1 312 0 22 0 0 0 chr2 68087258 68087280 -185169303 + AT_rich Low_complexity Low_complexity 1 22 0 815 192 0 20 chr2 68087423 68087574 -185169009 - FRAM SINE Alu -18 148 1 24 0 0 0 chr2 68087724 68087748 -185168835 + AT_rich Low_complexity Low_complexity 1 24 0 2190 138 0 0 chr2 68087786 68088097 -185168486 + AluSx SINE Alu 1 311 -1 293 325 0 0 chr2 68088459 68088542 -185168041 + GA-rich Low_complexity Low_complexity 2 84 0 380 316 66 7 chr2 68089098 68089250 -185167333 - MIR SINE MIR -89 173 13 2435 91 0 0 chr2 68090139 68090436 -185166147 - AluSx SINE Alu -15 297 1 1418 152 5 0 chr2 68090490 68090701 -185165882 + AluJb SINE Alu 85 296 -16 374 194 0 0 chr2 68090724 68090786 -185165797 + L1ME LINE L1 5601 5662 -508 639 70 20 20 chr2 68090787 68090887 -185165696 + AluY SINE Alu 193 292 -19 2320 122 0 0 chr2 68091063 68091367 -185165216 - AluSx SINE Alu -8 304 1 2075 108 4 7 chr2 68091409 68091688 -185164895 - AluSp SINE Alu -34 279 2 24 0 0 0 chr2 68091689 68091713 -185164870 + AT_rich Low_complexity Low_complexity 1 24 0 2269 121 0 0 chr2 68091972 68092278 -185164305 - AluSx SINE Alu -6 306 1 44 80 0 0 chr2 68092286 68092386 -185164197 + AT_rich Low_complexity Low_complexity 1 100 0 478 198 0 91 chr2 68092386 68092507 -185164076 - FLAM_A SINE Alu -18 124 15 943 210 51 91 chr2 68092519 68092702 -185163881 - Charlie2a DNA MER1_type -2018 844 655 2703 36 0 0 chr2 68092702 68093006 -185163577 + AluY SINE Alu 1 304 -7 943 210 51 91 chr2 68093006 68093112 -185163471 - Charlie2a DNA MER1_type -2207 655 546 2345 107 0 0 chr2 68093112 68093420 -185163163 + AluSx SINE Alu 1 308 -4 943 210 51 91 chr2 68093420 68093521 -185163062 - Charlie2a DNA MER1_type -2316 546 401 234 0 0 0 chr2 68093768 68093794 -185162789 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 2082 107 11 0 chr2 68093796 68094076 -185162507 - AluSx SINE Alu -29 283 1 204 125 0 0 chr2 68094202 68094234 -185162349 + (A)n Simple_repeat Simple_repeat 1 32 0 2309 100 3 0 chr2 68094240 68094539 -185162044 + AluSx SINE Alu 1 300 -12 2146 115 0 20 chr2 68095228 68095395 -185161188 - AluSp SINE Alu -15 298 138 2353 86 0 0 chr2 68095395 68095687 -185160896 - AluSp SINE Alu -21 292 1 2146 115 0 20 chr2 68095687 68095823 -185160760 - AluSp SINE Alu -175 138 1 1149 193 80 111 chr2 68095834 68096043 -185160540 - L1ME3A LINE L1 -273 5897 5683 2278 96 10 0 chr2 68096043 68096335 -185160248 + AluSq SINE Alu 1 295 -18 1149 193 80 111 chr2 68096335 68096423 -185160160 - L1ME3A LINE L1 -487 5683 5594 285 29 0 0 chr2 68096423 68096457 -185160126 + (TG)n Simple_repeat Simple_repeat 2 35 0 1149 193 80 111 chr2 68096457 68096524 -185160059 - L1ME3A LINE L1 -576 5594 5526 1625 152 41 11 chr2 68096524 68096794 -185159789 - AluJo SINE Alu -26 286 9 1149 193 80 111 chr2 68096794 68096847 -185159736 - L1ME3A LINE L1 -644 5526 5493 1631 160 88 9 chr2 68096847 68097166 -185159417 - MER2 DNA MER2_type 0 344 1 1149 193 80 111 chr2 68097166 68097232 -185159351 - L1ME3A LINE L1 -677 5493 5426 1226 198 18 18 chr2 68097239 68097517 -185159066 - L1ME3A LINE L1 -9 6161 5884 2222 124 3 0 chr2 68097573 68097880 -185158703 - AluSg SINE Alu -2 308 1 48 27 0 14 chr2 68098122 68098178 -185158405 + AT_rich Low_complexity Low_complexity 1 57 -15 2115 133 3 0 chr2 68098178 68098480 -185158103 - AluSx SINE Alu -9 303 1 48 27 0 14 chr2 68098480 68098496 -185158087 + AT_rich Low_complexity Low_complexity 57 72 0 2319 100 0 3 chr2 68098590 68098890 -185157693 - AluSq SINE Alu -14 299 1 292 324 36 32 chr2 68098978 68099228 -185157355 + L1ME LINE L1 5552 5802 -319 826 172 40 13 chr2 68099244 68099395 -185157188 + FRAM SINE Alu 1 150 -26 294 29 0 0 chr2 68099396 68099431 -185157152 + (CA)n Simple_repeat Simple_repeat 2 36 0 392 228 97 9 chr2 68099525 68099639 -185156944 - MIR SINE MIR -70 192 69 2484 70 3 0 chr2 68099650 68099948 -185156635 - AluSp SINE Alu -14 299 1 388 269 6 58 chr2 68099986 68100058 -185156525 - MER103 DNA DNA -3 163 89 6931 175 113 58 chr2 68100058 68100559 -185156024 - MER52A LTR ERV1 0 1755 1283 306 0 0 0 chr2 68100559 68100593 -185155990 + (TG)n Simple_repeat Simple_repeat 2 35 0 6931 175 113 58 chr2 68100593 68100630 -185155953 - MER52A LTR ERV1 -472 1283 1249 2174 122 3 0 chr2 68100630 68100924 -185155659 - AluSx SINE Alu -17 295 1 6931 175 113 58 chr2 68100924 68101306 -185155277 - MER52A LTR ERV1 -506 1249 889 2467 71 0 0 chr2 68101306 68101601 -185154982 - AluY SINE Alu -16 295 1 6931 175 113 58 chr2 68101601 68102342 -185154241 - MER52A LTR ERV1 -866 889 1 388 269 6 58 chr2 68102342 68102440 -185154143 - MER103 DNA DNA -77 89 2 1940 123 46 20 chr2 68102646 68102948 -185153635 + AluSx SINE Alu 1 310 -2 1597 162 26 36 chr2 68103181 68103483 -185153100 + AluJo SINE Alu 11 309 -3 630 140 0 0 chr2 68103564 68103657 -185152926 - AluJb SINE Alu -8 304 212 329 188 0 0 chr2 68103659 68103723 -185152860 - L1MC5 LINE L1 -107 7854 7791 198 0 0 0 chr2 68104176 68104198 -185152385 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 1807 122 63 7 chr2 68104205 68104476 -185152107 - AluSx SINE Alu -26 286 1 189 267 0 0 chr2 68104619 68104664 -185151919 - MIR SINE MIR -208 54 10 1879 126 141 25 chr2 68104664 68104990 -185151593 + THE1B LTR MaLR 1 364 0 1749 115 4 0 chr2 68104990 68105243 -185151340 + THE1B-int LTR MaLR 1 254 -1326 2486 99 6 30 chr2 68105243 68105537 -185151046 + THE1A LTR MaLR 1 286 -69 2407 95 0 0 chr2 68105537 68105833 -185150750 - AluSg SINE Alu -14 296 1 2486 99 6 30 chr2 68105833 68105902 -185150681 + THE1A LTR MaLR 286 355 0 8114 97 1 11 chr2 68105907 68106399 -185150184 + THE1A-int LTR MaLR 6 501 -1079 2318 113 7 0 chr2 68106399 68106708 -185149875 + AluSp SINE Alu 1 311 -2 8114 97 1 11 chr2 68106708 68107320 -185149263 + THE1A-int LTR MaLR 501 1099 -481 1405 200 35 87 chr2 68107489 68107805 -185148778 + L1MC5 LINE L1 6640 6928 -1033 3020 36 22 0 chr2 68107805 68108166 -185148417 + L1PA3 LINE L1 5787 6155 0 1405 200 35 87 chr2 68108166 68108284 -185148299 + L1MC5 LINE L1 6928 7051 -910 22 0 0 0 chr2 68108693 68108715 -185147868 + AT_rich Low_complexity Low_complexity 1 22 0 2088 100 0 78 chr2 68108739 68108926 -185147657 - AluSp SINE Alu -16 297 144 2498 76 3 6 chr2 68108926 68109240 -185147343 - AluSp SINE Alu 0 313 1 2088 100 0 78 chr2 68109240 68109373 -185147210 - AluSp SINE Alu -169 144 2 565 270 27 11 chr2 68109378 68109563 -185147020 - MIR SINE MIR -69 193 6 1793 135 0 63 chr2 68109920 68110133 -185146450 - AluJb SINE Alu 0 339 155 2212 86 3 30 chr2 68110133 68110435 -185146148 - AluSg SINE Alu -16 294 1 1793 135 0 63 chr2 68110435 68110581 -185146002 - AluJb SINE Alu -184 155 1 2067 84 54 20 chr2 68110931 68111227 -185145356 - AluSq SINE Alu -7 306 1 1123 211 89 103 chr2 68111952 68112215 -185144368 - L1ME3 LINE L1 -21 6141 5876 2490 87 0 0 chr2 68112215 68112526 -185144057 - AluY SINE Alu 0 311 1 1123 211 89 103 chr2 68112526 68112639 -185143944 - L1ME3 LINE L1 -286 5876 5771 1871 161 0 26 chr2 68112639 68112950 -185143633 - AluJb SINE Alu -9 303 1 1123 211 89 103 chr2 68112950 68113056 -185143527 - L1ME3 LINE L1 -391 5771 5665 278 203 0 14 chr2 68113059 68113133 -185143450 + (TATATG)n Simple_repeat Simple_repeat 2 74 0 246 128 0 0 chr2 68113133 68113172 -185143411 + (CA)n Simple_repeat Simple_repeat 2 40 0 472 258 38 6 chr2 68113855 68114014 -185142569 + L2 LINE L2 2364 2527 -787 1645 168 26 26 chr2 68114150 68114454 -185142129 - AluJb SINE Alu -8 304 1 1707 178 3 47 chr2 68114799 68114955 -185141628 + L1MB8 LINE L1 1 137 -6893 2386 79 0 0 chr2 68114955 68115247 -185141336 + AluY SINE Alu 19 310 -1 1707 178 3 47 chr2 68115247 68115411 -185141172 + L1MB8 LINE L1 137 307 -6723 973 144 122 16 chr2 68115421 68115609 -185140974 + AluJo SINE Alu 91 298 -14 745 214 64 0 chr2 68115614 68115754 -185140829 + MER82 DNA MER2_type 483 631 -22 4992 179 43 30 chr2 68115774 68116509 -185140074 + L1MB8 LINE L1 5371 6096 -1042 1609 177 64 0 chr2 68116509 68116801 -185139782 + AluJb SINE Alu 1 309 0 4992 179 43 30 chr2 68116801 68117445 -185139138 + L1MB8 LINE L1 6096 6731 -407 2152 130 3 0 chr2 68117445 68117744 -185138839 + AluSq SINE Alu 1 300 -13 4992 179 43 30 chr2 68117744 68117980 -185138603 + L1MB8 LINE L1 6731 7120 -18 1961 124 3 14 chr2 68117980 68118263 -185138320 - AluSx SINE Alu -20 292 13 4992 179 43 30 chr2 68118263 68118283 -185138300 + L1MB8 LINE L1 7120 7138 0 345 196 116 36 chr2 68120297 68120409 -185136174 + L1ME LINE L1 5591 5711 -410 2126 108 0 0 chr2 68120532 68120810 -185135773 - AluSq SINE Alu -35 278 1 255 61 0 0 chr2 68120924 68120957 -185135626 + (CA)n Simple_repeat Simple_repeat 2 34 0 1735 129 31 35 chr2 68121258 68121545 -185135038 + AluJo SINE Alu 1 286 -26 228 259 111 25 chr2 68121566 68121647 -185134936 - MLT1K LTR MaLR -375 213 126 2388 70 0 0 chr2 68121738 68122025 -185134558 - AluY SINE Alu -24 287 1 464 250 8 38 chr2 68122463 68122595 -185133988 + MLT1K LTR MaLR 2 129 -459 265 264 35 11 chr2 68122594 68122681 -185133902 + MLT1L LTR MaLR 150 238 -377 * 15738 147 14 2 chr2 68122681 68125054 -185131529 + L1 LINE L1 9 2407 -5158 11277 151 13 107 chr2 68125058 68127225 -185129358 + L1 LINE L1 3729 5850 -1715 1268 176 0 34 chr2 68127225 68127458 -185129125 + AluJo SINE Alu 85 309 -3 11277 151 13 107 chr2 68127458 68127754 -185128829 + L1 LINE L1 5850 6172 -1393 862 131 0 0 chr2 68128072 68128194 -185128389 + FLAM_C SINE Alu 2 123 -10 862 157 290 5 chr2 68128197 68128414 -185128169 + L1 LINE L1 6151 6429 -1136 744 256 48 22 chr2 68128462 68128689 -185127894 + MLT1K LTR MaLR 311 543 -45 2444 115 15 10 chr2 68128730 68129121 -185127462 + L1MA8 LINE L1 5898 6290 -1 1753 136 64 25 chr2 68130565 68130845 -185125738 + AluJo SINE Alu 1 291 -21 231 257 0 0 chr2 68130858 68130928 -185125655 + L1ME1 LINE L1 6091 6160 -6 2289 116 0 0 chr2 68131140 68131442 -185125141 + AluSx SINE Alu 2 303 -9 235 224 119 45 chr2 68131462 68131596 -185124987 + L1ME4a LINE L1 5967 6110 -11 702 266 39 108 chr2 68131613 68132309 -185124274 - L1MC5 LINE L1 -44 7917 7270 279 304 71 11 chr2 68132340 68132524 -185124059 + L3 LINE CR1 760 954 -623 2607 58 3 0 chr2 68132524 68132834 -185123749 + AluY SINE Alu 1 311 0 1531 156 42 65 chr2 68132915 68133223 -185123360 - AluSx SINE Alu -11 301 1 215 235 235 12 chr2 68133269 68133354 -185123229 + MIR SINE MIR 13 116 -146 448 271 110 29 chr2 68133429 68133699 -185122884 + L1ME3 LINE L1 5634 5925 -243 3741 192 46 64 chr2 68133766 68134708 -185121875 - L1MD2 LINE L1 -3 6356 5432 1745 183 23 0 chr2 68134708 68135009 -185121574 - AluJo SINE Alu -4 308 1 823 163 7 7 chr2 68135009 68135144 -185121439 - AluJo SINE Alu -177 135 1 454 65 0 0 chr2 68135144 68135206 -185121377 - L1MC/D LINE L1 -802 5440 5379 2427 97 0 0 chr2 68135366 68135676 -185120907 + AluSq SINE Alu 1 310 -3 772 137 15 0 chr2 68135677 68135808 -185120775 + L1MA4 LINE L1 6167 6299 -1 1958 175 0 0 chr2 68136096 68136405 -185120178 - AluSx SINE Alu -3 309 1 856 148 16 0 chr2 68136418 68136546 -185120037 - FLAM_C SINE Alu -1 132 3 219 69 0 0 chr2 68137465 68137494 -185119089 + (CA)n Simple_repeat Simple_repeat 1 29 0 812 222 87 96 chr2 68137497 68137894 -185118689 - HAL1 LINE L1 -34 2473 2074 2009 104 22 0 chr2 68137894 68138193 -185118390 - AluSx SINE Alu 0 305 1 812 222 87 96 chr2 68138193 68138255 -185118328 - HAL1 LINE L1 -433 2074 2013 2244 110 0 22 chr2 68138255 68138572 -185118011 - AluSq SINE Alu -3 310 1 812 222 87 96 chr2 68138572 68138663 -185117920 - HAL1 LINE L1 -494 2013 1926 261 57 0 0 chr2 68138672 68138707 -185117876 + (GA)n Simple_repeat Simple_repeat 1 35 0 378 290 89 18 chr2 68138720 68138889 -185117694 - HAL1 LINE L1 -678 1829 1649 22 56 0 0 chr2 68138889 68138925 -185117658 + AT_rich Low_complexity Low_complexity 1 36 0 868 208 6 6 chr2 68138990 68139149 -185117434 + FRAM SINE Alu 17 175 -1 21 0 0 0 chr2 68139150 68139171 -185117412 + AT_rich Low_complexity Low_complexity 1 21 0 252 212 51 93 chr2 68139193 68139311 -185117272 - HAL1 LINE L1 -1696 811 699 334 330 96 9 chr2 68139413 68139643 -185116940 - HAL1 LINE L1 -1913 594 345 323 223 47 112 chr2 68139646 68139879 -185116704 - HAL1 LINE L1 -2231 276 59 299 270 270 34 chr2 68139949 68140097 -185116486 + L2 LINE L2 2735 2917 -397 1640 259 32 57 chr2 68140136 68140642 -185115941 + MLT1J LTR MaLR 5 497 -14 515 249 144 23 chr2 68140711 68140884 -185115699 + L2 LINE L2 3114 3307 -6 1561 135 24 74 chr2 68141092 68141417 -185115166 + AluJb SINE Alu 1 310 0 242 355 25 16 chr2 68141468 68141589 -185114994 + MIR SINE MIR 15 136 -126 214 143 48 0 chr2 68141591 68141633 -185114950 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 275 359 38 30 chr2 68141678 68141809 -185114774 - MIR SINE MIR -127 135 4 4645 149 34 68 chr2 68142113 68142810 -185113773 - L1MB7 LINE L1 -9 6175 5456 2648 35 0 16 chr2 68142810 68143122 -185113461 + AluY SINE Alu 1 307 -4 4645 149 34 68 chr2 68143122 68143306 -185113277 - L1MB7 LINE L1 -728 5456 5267 1048 173 0 18 chr2 68143306 68143474 -185113109 - FRAM SINE Alu -1 165 1 4645 149 34 68 chr2 68143474 68143832 -185112751 - L1MB7 LINE L1 -917 5267 4959 1787 158 7 0 chr2 68143850 68144123 -185112460 + AluSx SINE Alu 1 275 -37 192 40 0 0 chr2 68144129 68144154 -185112429 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 2286 116 3 3 chr2 68144154 68144464 -185112119 + AluSg SINE Alu 1 310 0 235 200 0 0 chr2 68144696 68144741 -185111842 + L1MC4 LINE L1 7202 7246 -796 726 259 38 44 chr2 68144768 68145072 -185111511 + L1MC5 LINE L1 7261 7477 -484 1570 179 21 11 chr2 68145072 68145352 -185111231 + AluJo SINE Alu 1 283 -29 726 259 38 44 chr2 68145352 68145452 -185111131 + L1MC5 LINE L1 7477 7576 -385 815 130 0 0 chr2 68145456 68145571 -185111012 - L1M4 LINE L1 -513 5665 5551 1847 140 40 0 chr2 68145592 68145895 -185110688 + AluSx SINE Alu 1 314 0 2179 129 3 0 chr2 68146030 68146333 -185110250 - AluSx SINE Alu -7 305 2 3322 149 16 5 chr2 68146364 68146915 -185109668 + L1MA4 LINE L1 5604 6160 -140 613 153 0 107 chr2 68146992 68147123 -185109460 + FLAM_C SINE Alu 1 117 -16 454 181 19 0 chr2 68147123 68147228 -185109355 + CT-rich Low_complexity Low_complexity 1 107 0 734 139 0 0 chr2 68147228 68147336 -185109247 - AluSx SINE Alu 0 309 202 942 157 0 0 chr2 68147341 68147481 -185109102 - AluSx SINE Alu -173 140 1 207 103 0 26 chr2 68147499 68147538 -185109045 + (TAAAA)n Simple_repeat Simple_repeat 3 40 0 230 286 66 33 chr2 68147613 68147706 -185108877 + MIR SINE MIR 13 107 -102 1944 224 88 21 chr2 68147708 68148359 -185108224 - L1MB7 LINE L1 0 6184 5578 2078 95 7 7 chr2 68148359 68148675 -185107908 - AluSx SINE Alu 0 316 1 1944 224 88 21 chr2 68148675 68148865 -185107718 - L1MB7 LINE L1 -606 5578 5402 2429 90 10 0 chr2 68148865 68149175 -185107408 - AluSq SINE Alu 0 313 1 1944 224 88 21 chr2 68149175 68149247 -185107336 - L1MB7 LINE L1 -782 5402 5336 1718 155 56 0 chr2 68149247 68149531 -185107052 - AluJb SINE Alu 0 312 13 1944 224 88 21 chr2 68149531 68150067 -185106516 - L1MB7 LINE L1 -848 5336 4628 2235 85 14 0 chr2 68150067 68150361 -185106222 - AluSx SINE Alu -12 300 3 299 234 262 7 chr2 68151203 68151348 -185105235 - MIR SINE MIR -60 202 21 354 269 58 0 chr2 68151486 68151590 -185104993 + L1MC4a LINE L1 6555 6664 -1144 21 0 0 0 chr2 68152637 68152658 -185103925 + AT_rich Low_complexity Low_complexity 1 21 0 2151 71 0 18 chr2 68153031 68153311 -185103272 + AluSq SINE Alu 23 297 -16 2544 56 16 0 chr2 68153686 68153990 -185102593 + AluSx SINE Alu 1 309 -3 28 48 0 0 chr2 68154422 68154464 -185102119 + AT_rich Low_complexity Low_complexity 1 42 0 1949 150 3 0 chr2 68154616 68154923 -185101660 - AluJb SINE Alu -4 308 1 2174 105 7 0 chr2 68154984 68155278 -185101305 + AluSx SINE Alu 1 296 -16 779 206 0 7 chr2 68155766 68155902 -185100681 + FLAM_C SINE Alu 2 136 -7 1288 78 209 5 chr2 68155970 68156161 -185100422 + MER30 DNA MER1_type 1 230 0 2135 122 3 0 chr2 68157210 68157506 -185099077 - AluSx SINE Alu -15 297 1 820 152 16 8 chr2 68157586 68157711 -185098872 + FLAM_C SINE Alu 2 127 -16 32 0 0 0 chr2 68157711 68157743 -185098840 + AT_rich Low_complexity Low_complexity 1 32 0 419 77 0 0 chr2 68157746 68157798 -185098785 - MER66B LTR ERV1 -140 346 295 2126 130 3 16 chr2 68157807 68158123 -185098460 - AluSx SINE Alu 0 312 1 1660 169 0 30 chr2 68158123 68158424 -185098159 - AluJo SINE Alu -20 292 1 230 81 27 0 chr2 68159382 68159419 -185097164 + (TG)n Simple_repeat Simple_repeat 2 39 0 2122 111 0 0 chr2 68159687 68159987 -185096596 + AluSg SINE Alu 1 300 0 1996 97 68 0 chr2 68160285 68160563 -185096020 + AluSx SINE Alu 1 297 -15 1558 140 4 21 chr2 68160752 68161038 -185095545 - AluSx SINE Alu 0 312 58 21 0 0 0 chr2 68161195 68161216 -185095367 + AT_rich Low_complexity Low_complexity 1 21 0 329 238 0 0 chr2 68161271 68161334 -185095249 - L2 LINE L2 -19 3294 3232 1259 182 131 33 chr2 68161479 68161754 -185094829 - AluJb SINE Alu -9 303 2 1580 174 4 25 chr2 68161783 68161920 -185094663 + AluJo SINE Alu 2 131 -181 1864 123 29 45 chr2 68161920 68162230 -185094353 + AluSx SINE Alu 2 306 -6 1580 174 4 25 chr2 68162230 68162373 -185094210 + AluJo SINE Alu 131 276 -36 32 26 0 0 chr2 68162379 68162418 -185094165 + AT_rich Low_complexity Low_complexity 1 39 0 2498 54 7 0 chr2 68162590 68162887 -185093696 + AluY SINE Alu 1 299 -12 2291 92 0 3 chr2 68162897 68163192 -185093391 + AluSq SINE Alu 1 294 -19 2444 77 3 0 chr2 68163386 68163686 -185092897 + AluSp SINE Alu 2 302 -11 318 352 16 0 chr2 68163706 68163834 -185092749 - L2 LINE L2 0 3313 3184 2217 113 7 0 chr2 68167212 68167512 -185089071 + AluSg SINE Alu 2 303 -7 1551 185 18 14 chr2 68167560 68167841 -185088742 + AluJo SINE Alu 1 282 -30 306 283 53 75 chr2 68168621 68168808 -185087775 - L1MC4 LINE L1 -29 8013 7831 1984 139 24 3 chr2 68168878 68169172 -185087411 + AluJb SINE Alu 1 300 -12 2288 107 0 0 chr2 68169450 68169739 -185086844 + AluSx SINE Alu 1 289 -23 266 254 151 63 chr2 68171068 68171194 -185085389 - L2 LINE L2 -21 3292 3156 1751 127 190 30 chr2 68171324 68171519 -185085064 - Tigger2 DNA MER2_type 0 2718 2555 2546 54 0 0 chr2 68171519 68171816 -185084767 + AluY SINE Alu 1 297 -14 1751 127 190 30 chr2 68171816 68172041 -185084542 - Tigger2 DNA MER2_type -163 2555 1 950 301 146 7 chr2 68172106 68172331 -185084252 - L2 LINE L2 -275 3038 2846 2215 109 0 3 chr2 68172331 68172625 -185083958 + AluSg SINE Alu 1 293 -17 950 301 146 7 chr2 68172625 68172854 -185083729 - L2 LINE L2 -467 2846 2517 2126 111 44 0 chr2 68172956 68173253 -185083330 + AluSx SINE Alu 1 310 -2 2508 60 0 0 chr2 68174295 68174594 -185081989 + AluY SINE Alu 1 299 -12 2381 105 0 0 chr2 68174605 68174909 -185081674 + AluSg SINE Alu 1 304 -6 2183 121 3 0 chr2 68175583 68175872 -185080711 - AluSp SINE Alu -22 291 2 189 129 21 194 chr2 68176165 68176258 -185080325 - L2 LINE L2 -8 3264 3188 2348 88 0 31 chr2 68176571 68176891 -185079692 + AluY SINE Alu 1 310 -1 1155 217 14 5 chr2 68176899 68177116 -185079467 + AluJo SINE Alu 1 219 -93 1942 146 0 19 chr2 68177371 68177679 -185078904 + AluJb SINE Alu 2 303 -9 25 0 0 0 chr2 68178710 68178735 -185077848 + AT_rich Low_complexity Low_complexity 1 25 0 557 229 257 6 chr2 68178783 68178958 -185077625 + MER20 DNA MER1_type 1 219 0 267 268 14 0 chr2 68179284 68179355 -185077228 - L2 LINE L2 -2 3311 3240 261 156 260 26 chr2 68180298 68180375 -185076208 + MER103 DNA DNA 58 152 -14 2312 92 3 3 chr2 68180802 68181108 -185075475 + AluSx SINE Alu 1 306 -6 7250 60 0 3 chr2 68181161 68182273 -185074310 - L1PA7 LINE L1 -3 6151 5037 223 239 0 30 chr2 68182493 68182506 -185074077 + (TA)n Simple_repeat Simple_repeat 1 13 -52 1898 142 0 42 chr2 68182506 68182816 -185073767 + AluJo SINE Alu 1 297 -15 223 239 0 30 chr2 68182816 68182869 -185073714 + (TA)n Simple_repeat Simple_repeat 13 65 0 822 167 0 21 chr2 68183179 68183323 -185073260 - AluJb SINE Alu -9 303 163 1767 174 10 3 chr2 68183354 68183642 -185072941 + AluJo SINE Alu 1 290 -22 2053 134 0 3 chr2 68183658 68183950 -185072633 + AluSx SINE Alu 1 291 -21 2044 121 11 0 chr2 68184438 68184719 -185071864 + AluSx SINE Alu 1 284 -28 2461 73 0 3 chr2 68185131 68185431 -185071152 - AluY SINE Alu -12 299 1 568 264 132 9 chr2 68185900 68186123 -185070460 - L1MD3 LINE L1 -7 8034 7795 * 2717 92 50 41 chr2 68186102 68186625 -185069958 - L1M2 LINE L1 -605 5686 5163 1726 134 7 48 chr2 68186625 68186915 -185069668 - AluSx SINE Alu -6 306 29 2717 92 50 41 chr2 68186915 68186954 -185069629 - L1M2 LINE L1 -1128 5163 5126 291 286 0 0 chr2 68186933 68186996 -185069587 - L1MC/D LINE L1 -2197 5611 5549 * 367 218 26 0 chr2 68187001 68187079 -185069504 - L1MC/D LINE L1 -2338 5470 5391 1579 174 3 31 chr2 68187079 68187367 -185069216 + AluJo SINE Alu 3 282 -30 29 47 0 0 chr2 68187393 68187436 -185069147 + AT_rich Low_complexity Low_complexity 1 43 0 961 130 68 0 chr2 68187450 68187596 -185068987 - AluSc SINE Alu -19 290 135 2272 73 0 54 chr2 68188159 68188475 -185068108 + AluSg SINE Alu 1 299 -11 955 236 166 31 chr2 68190479 68191147 -185065436 - L2 LINE L2 -2 3311 2559 375 230 170 7 chr2 68191153 68191288 -185065295 - L2 LINE L2 -2008 1306 1150 577 255 74 63 chr2 68191304 68191536 -185065047 - L2 LINE L2 -2721 593 356 546 202 136 94 chr2 68191536 68191749 -185064834 + MER58A DNA MER1_type 2 223 -1 577 255 74 63 chr2 68191749 68191787 -185064796 - L2 LINE L2 -2958 356 320 252 0 0 0 chr2 68192264 68192292 -185064291 + (T)n Simple_repeat Simple_repeat 1 28 0 1913 64 9 4 chr2 68192303 68192536 -185064047 - AluY SINE Alu -77 234 1 402 252 49 32 chr2 68192650 68192773 -185063810 + MER94 DNA DNA 1 125 -9 194 200 0 0 chr2 68192793 68192828 -185063755 + MIR SINE MIR 89 123 -139 30 0 0 0 chr2 68195374 68195404 -185061179 + AT_rich Low_complexity Low_complexity 1 30 0 2458 54 14 0 chr2 68196449 68196743 -185059840 - AluSp SINE Alu -15 298 1 2083 115 7 3 chr2 68197717 68198012 -185058571 + AluSp SINE Alu 1 296 -17 1902 109 19 4 chr2 68198239 68198496 -185058087 + AluSx SINE Alu 24 284 -28 2164 91 23 26 chr2 68199109 68199416 -185057167 + AluSx SINE Alu 1 306 -6 252 260 52 0 chr2 68201429 68201506 -185055077 - MER5A DNA MER1_type 0 189 109 392 254 145 12 chr2 68202051 68202245 -185054338 - MIR SINE MIR -9 253 38 2129 98 3 58 chr2 68203823 68204151 -185052432 - AluSx SINE Alu -1 311 2 2525 54 0 3 chr2 68204521 68204818 -185051765 + AluY SINE Alu 1 296 -15 2263 78 3 3 chr2 68205130 68205436 -185051147 + AluSp SINE Alu 1 306 0 1505 207 0 0 chr2 68205464 68205749 -185050834 + AluJb SINE Alu 12 296 -16 2423 89 0 3 chr2 68205791 68206093 -185050490 + AluSq SINE Alu 1 301 -12 442 247 11 0 chr2 68206347 68206525 -185050058 + CT-rich Low_complexity Low_complexity 1 180 0 278 189 19 0 chr2 68206538 68206591 -185049992 + C-rich Low_complexity Low_complexity 6 59 0 470 309 0 22 chr2 68206942 68207078 -185049505 + LTR67 LTR ERVL 2 134 -423 458 303 63 33 chr2 68207109 68207442 -185049141 + LTR67 LTR ERVL 215 557 0 902 176 13 0 chr2 68207709 68207862 -185048721 + FAM SINE Alu 4 158 -17 1893 118 73 0 chr2 68207919 68208191 -185048392 + AluSx SINE Alu 10 301 -11 402 239 99 0 chr2 68208242 68208384 -185048199 - MIR SINE MIR -50 212 57 832 149 0 0 chr2 68208465 68208586 -185047997 + AluSq/x SINE Alu 1 121 -192 1337 197 67 31 chr2 68208694 68209054 -185047529 + L1MC4 LINE L1 7533 7905 -137 2405 68 7 0 chr2 68209062 68209357 -185047226 - AluY SINE Alu -14 297 1 25 46 0 46 chr2 68209412 68209449 -185047134 + AT_rich Low_complexity Low_complexity 1 35 -27 1905 121 36 0 chr2 68209449 68209730 -185046853 - AluSx SINE Alu -18 294 4 25 46 0 46 chr2 68209730 68209757 -185046826 + AT_rich Low_complexity Low_complexity 35 62 0 1835 178 103 48 chr2 68210510 68210754 -185045829 - Charlie1a DNA MER1_type -2238 523 294 2374 91 3 0 chr2 68210754 68211052 -185045531 - AluSp SINE Alu -14 299 1 1835 178 103 48 chr2 68211052 68211262 -185045321 - Charlie1a DNA MER1_type -2467 294 44 324 70 0 0 chr2 68211297 68211340 -185045243 + (A)n Simple_repeat Simple_repeat 1 43 0 968 113 0 0 chr2 68211500 68211624 -185044959 + FLAM_C SINE Alu 1 124 -19 299 294 85 26 chr2 68211832 68211985 -185044598 + HAL1b LINE L1 420 581 -767 303 252 0 45 chr2 68212254 68212365 -185044218 + L1MC4a LINE L1 5802 5907 -1901 203 244 0 0 chr2 68212407 68212448 -185044135 + (CA)n Simple_repeat Simple_repeat 2 42 0 1768 169 15 76 chr2 68212517 68212924 -185043659 + MLT1B LTR MaLR 1 382 -8 2110 124 0 0 chr2 68212961 68213263 -185043320 - AluSx SINE Alu 0 302 1 1880 136 7 11 chr2 68213527 68213851 -185042732 - AluSx SINE Alu 0 323 1 1514 158 82 35 chr2 68213856 68213907 -185042676 + Charlie1a DNA MER1_type 885 932 -1829 2152 132 0 0 chr2 68213907 68214203 -185042380 - AluSq SINE Alu -17 296 1 1514 158 82 35 chr2 68214203 68214493 -185042090 + Charlie1a DNA MER1_type 932 1242 -213 805 198 19 12 chr2 68214493 68214655 -185041928 - FRAM SINE Alu -13 163 1 285 139 0 0 chr2 68214656 68214699 -185041884 + Charlie1a DNA MER1_type 1396 1438 -17 468 35 0 0 chr2 68215418 68215476 -185041107 + (TC)n Simple_repeat Simple_repeat 2 59 0 336 180 153 18 chr2 68217229 68217340 -185039243 - MIR SINE MIR -71 191 66 418 156 0 0 chr2 68217374 68217438 -185039145 - MER2 DNA MER2_type -1 344 281 2246 100 3 13 chr2 68217447 68217748 -185038835 + AluSq SINE Alu 1 298 -15 1898 156 7 19 chr2 68217796 68218104 -185038479 + AluJb SINE Alu 1 304 -8 695 89 139 0 chr2 68218125 68218226 -185038357 - MER2 DNA MER2_type -223 122 8 182 315 14 14 chr2 68218562 68218635 -185037948 + MIR SINE MIR 99 171 -91 423 0 0 0 chr2 68219035 68219082 -185037501 + (CA)n Simple_repeat Simple_repeat 2 48 0 398 260 13 97 chr2 68223029 68223127 -185033456 + MIR3 SINE MIR 65 147 -61 508 253 99 25 chr2 68223127 68223289 -185033294 + MER5B DNA MER1_type 3 176 -2 398 260 13 97 chr2 68223289 68223344 -185033239 + MIR3 SINE MIR 147 205 -3 419 261 108 17 chr2 68223640 68223816 -185032767 - MER117 DNA MER1_type 0 197 6 25 0 0 0 chr2 68223993 68224018 -185032565 + AT_rich Low_complexity Low_complexity 1 25 0 716 230 42 55 chr2 68224101 68224318 -185032265 + MIR SINE MIR 46 259 -3 542 267 114 0 chr2 68224577 68224753 -185031830 + MER20B DNA MER1_type 9 204 -579 2172 105 3 14 chr2 68224876 68225172 -185031411 - AluSx SINE Alu -19 293 1 1402 155 7 72 chr2 68225422 68225713 -185030870 - AluSx SINE Alu 0 312 41 1970 239 190 25 chr2 68225833 68226815 -185029768 + L2 LINE L2 411 1554 -1760 381 337 41 6 chr2 68226815 68226987 -185029596 + L2 LINE L2 2208 2385 -929 947 261 244 12 chr2 68226987 68227633 -185028950 + L2 LINE L2 2510 3294 -19 2144 91 39 3 chr2 68227682 68227968 -185028615 + AluSq SINE Alu 1 296 -17 2123 121 0 10 chr2 68228188 68228495 -185028088 + AluSc SINE Alu 1 304 -5 183 42 0 0 chr2 68228575 68228599 -185027984 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 190 204 0 68 chr2 68230090 68230134 -185026449 + MIR SINE MIR 110 150 -58 2269 116 0 0 chr2 68231782 68232085 -185024498 - AluSq SINE Alu -10 303 1 1451 170 0 4 chr2 68234646 68234876 -185021707 + AluSq SINE Alu 1 229 -84 292 290 19 77 chr2 68235388 68235595 -185020988 + L1MC4 LINE L1 7831 8025 -17 198 0 0 0 chr2 68235748 68235770 -185020813 + (T)n Simple_repeat Simple_repeat 1 22 0 2252 114 0 7 chr2 68235921 68236228 -185020355 + AluSx SINE Alu 1 305 -7 246 326 76 23 chr2 68236603 68236735 -185019848 - MIR3 SINE MIR -31 177 39 307 240 13 27 chr2 68237098 68237173 -185019410 + MIR3 SINE MIR 114 187 -21 1214 144 0 5 chr2 68238859 68238994 -185017589 + AluYb8 SINE Alu 1 134 -184 2355 106 0 0 chr2 68238994 68239306 -185017277 + AluSx SINE Alu 1 312 0 227 211 19 0 chr2 68239577 68239629 -185016954 - L1M1 LINE L1 -659 5645 5593 843 142 39 26 chr2 68239666 68239821 -185016762 + L1MB1 LINE L1 5777 5933 -235 532 153 0 12 chr2 68240043 68240128 -185016455 + FLAM_C SINE Alu 35 118 -25 299 239 30 0 chr2 68241411 68241478 -185015105 - MER112 DNA MER1_type -9 251 183 280 336 101 9 chr2 68241481 68241698 -185014885 - L1ME3A LINE L1 -1 6169 5933 357 224 126 49 chr2 68241727 68241870 -185014713 - MER112 DNA MER1_type -78 182 29 2080 93 25 4 chr2 68242715 68243014 -185013569 - AluY SINE Alu 0 305 1 415 287 14 7 chr2 68243475 68243618 -185012965 + MIR SINE MIR 98 241 -21 2187 120 0 0 chr2 68244287 68244639 -185011944 + AluSx SINE Alu 1 312 0 2135 99 85 23 chr2 68245048 68245390 -185011193 + THE1B LTR MaLR 1 363 -1 25 31 0 0 chr2 68245708 68245740 -185010843 + AT_rich Low_complexity Low_complexity 1 32 0 1549 156 97 4 chr2 68245743 68246000 -185010583 - AluJb SINE Alu -27 285 5 340 205 71 27 chr2 68246513 68246625 -185009958 + MLT1K LTR MaLR 446 562 -26 197 235 71 47 chr2 68246864 68246949 -185009634 - MIR SINE MIR -83 125 39 845 159 0 0 chr2 68248446 68248578 -185008005 + FLAM_C SINE Alu 2 133 0 244 325 127 6 chr2 68248656 68248813 -185007770 + MIR SINE MIR 17 192 -70 1997 138 0 7 chr2 68248839 68249130 -185007453 - AluSx SINE Alu -23 289 1 629 280 140 33 chr2 68249134 68249285 -185007298 - L1M4 LINE L1 -1778 4368 4235 378 0 0 0 chr2 68249285 68249327 -185007256 + (TC)n Simple_repeat Simple_repeat 2 43 0 225 0 0 0 chr2 68249326 68249351 -185007232 + (TA)n Simple_repeat Simple_repeat 2 26 0 * 629 280 140 33 chr2 68249327 68249351 -185007232 - L1M4 LINE L1 -1911 4235 4215 2410 88 0 0 chr2 68249351 68249648 -185006935 - AluY SINE Alu -14 297 1 629 280 140 33 chr2 68249648 68250010 -185006573 - L1M4 LINE L1 -1931 4215 3799 1523 106 5 5 chr2 68250050 68250257 -185006326 - AluSg/x SINE Alu -12 298 92 1458 111 0 37 chr2 68250357 68250573 -185006010 + AluY SINE Alu 95 302 -9 2270 124 25 8 chr2 68250792 68251147 -185005436 - MER46B DNA MER2_type 0 236 1 1077 114 102 0 chr2 68251268 68251434 -185005149 - AluSg/x SINE Alu -9 301 119 766 190 54 78 chr2 68251502 68251623 -185004960 + MER20B DNA MER1_type 515 637 -146 966 134 114 35 chr2 68251623 68251825 -185004758 + MER20 DNA MER1_type 2 219 0 766 190 54 78 chr2 68251825 68251865 -185004718 + MER20B DNA MER1_type 637 676 -107 2286 101 3 0 chr2 68251865 68252162 -185004421 + AluSp SINE Alu 1 298 -15 766 190 54 78 chr2 68252162 68252241 -185004342 + MER20B DNA MER1_type 676 750 -33 267 242 20 61 chr2 68252898 68252997 -185003586 + MIR SINE MIR 53 147 -115 255 257 148 38 chr2 68253272 68253455 -185003128 - MIR SINE MIR -15 247 45 223 204 148 0 chr2 68254000 68254054 -185002529 - MIR SINE MIR -128 134 73 769 142 16 8 chr2 68254348 68254475 -185002108 - FLAM_C SINE Alu -1 132 5 201 283 19 0 chr2 68255319 68255372 -185001211 + MIR3 SINE MIR 142 195 -13 1267 235 114 12 chr2 68255473 68256018 -185000565 - L2 LINE L2 -5 3308 2712 189 0 0 0 chr2 68256711 68256732 -184999851 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 2433 72 3 13 chr2 68256745 68257051 -184999532 - AluY SINE Alu -8 303 1 1710 143 92 11 chr2 68257054 68257327 -184999256 - AluSx SINE Alu -17 295 1 626 251 118 0 chr2 68258007 68258202 -184998381 - MIR SINE MIR -24 238 21 2104 112 0 7 chr2 68258237 68258552 -184998031 + AluSq SINE Alu 1 313 0 429 284 69 23 chr2 68258738 68258956 -184997627 - L1MC4a LINE L1 -1883 5925 5698 256 150 0 0 chr2 68259369 68259409 -184997174 - MIR SINE MIR -87 121 82 2350 55 39 42 chr2 68259598 68259908 -184996675 - AluY SINE Alu -2 309 1 2224 124 0 0 chr2 68259908 68260205 -184996378 - AluSx SINE Alu -14 298 1 521 251 143 44 chr2 68260239 68260581 -184996002 - MLT1J2 LTR MaLR -2 448 73 507 49 0 0 chr2 68262041 68262102 -184994481 - AluJ/FLAM SINE Alu -241 71 11 1876 134 0 49 chr2 68262157 68262464 -184994119 - AluJo SINE Alu -20 292 1 2556 71 0 0 chr2 68263022 68263330 -184993253 - AluSg SINE Alu -2 308 1 209 321 47 19 chr2 68263748 68263854 -184992729 + MIR SINE MIR 82 190 -72 254 330 0 0 chr2 68265541 68265629 -184990954 - MER112 DNA MER1_type -10 250 163 507 239 93 104 chr2 68265636 68265775 -184990808 + L1MC4 LINE L1 7691 7830 -212 1743 135 67 0 chr2 68265775 68266072 -184990511 - L1MC1 LINE L1 -1 6332 6016 507 239 93 104 chr2 68266072 68266288 -184990295 + L1MC4 LINE L1 7830 8042 0 733 174 0 58 chr2 68266436 68266574 -184990009 + FLAM_C SINE Alu 1 130 -3 569 212 9 0 chr2 68266910 68267023 -184989560 + MER81 DNA DNA 1 114 0 2317 83 23 3 chr2 68268296 68268597 -184987986 + AluSg SINE Alu 1 307 -3 1919 164 0 7 chr2 68271392 68271697 -184984886 + AluJb SINE Alu 10 312 0 2487 58 0 0 chr2 68272137 68272432 -184984151 + AluY SINE Alu 1 295 -16 272 156 16 31 chr2 68273025 68273089 -184983494 - L1MC1 LINE L1 -2009 5799 5737 424 134 61 12 chr2 68273164 68273246 -184983337 + Charlie1 DNA MER1_type 1985 2070 -691 3076 157 83 71 chr2 68273283 68273451 -184983132 + Charlie1 DNA MER1_type 2017 2181 -580 1139 0 0 55 chr2 68273451 68273632 -184982951 + (TCTCCC)n Simple_repeat Simple_repeat 2 172 0 9672 60 19 65 chr2 68273632 68275026 -184981557 + SVA Other Other 53 1382 -4 3076 157 83 71 chr2 68275026 68275591 -184980992 + Charlie1 DNA MER1_type 2180 2760 -1 423 285 69 26 chr2 68275593 68275837 -184980746 - L1MC1 LINE L1 -430 5691 5437 24 0 0 0 chr2 68275894 68275918 -184980665 + AT_rich Low_complexity Low_complexity 1 24 0 205 258 16 16 chr2 68276337 68276399 -184980184 + GA-rich Low_complexity Low_complexity 4 65 0 252 122 0 0 chr2 68276412 68276453 -184980130 + (TG)n Simple_repeat Simple_repeat 1 41 0 192 288 45 36 chr2 68276896 68277007 -184979576 + MIR SINE MIR 107 218 -44 21 36 0 0 chr2 68277207 68277235 -184979348 + AT_rich Low_complexity Low_complexity 1 28 0 517 122 14 87 chr2 68277453 68277809 -184978774 + (TATATG)n Simple_repeat Simple_repeat 1 329 0 729 165 0 24 chr2 68278138 68278265 -184978318 + FLAM_A SINE Alu 1 124 -9 2317 95 33 10 chr2 68279172 68279477 -184977106 + AluSx SINE Alu 1 312 0 2219 97 13 3 chr2 68280568 68280866 -184975717 - AluSq SINE Alu -10 303 3 2019 117 4 0 chr2 68281355 68281629 -184974954 + AluSq SINE Alu 39 313 0 419 70 0 0 chr2 68281635 68281692 -184974891 + Alu SINE Alu 2 58 -255 228 35 0 0 chr2 68281741 68281770 -184974813 + (T)n Simple_repeat Simple_repeat 1 29 0 1451 149 9 0 chr2 68281775 68282003 -184974580 + AluSp SINE Alu 77 306 -7 243 0 0 0 chr2 68284770 68284797 -184971786 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 180 0 0 0 chr2 68285046 68285066 -184971517 + (CAA)n Simple_repeat Simple_repeat 2 21 0 378 231 78 71 chr2 68285947 68286228 -184970355 + L1MC5 LINE L1 7659 7941 -20 412 224 72 33 chr2 68287319 68287471 -184969112 + L1MC4 LINE L1 7883 8040 -2 1773 156 25 7 chr2 68287545 68287827 -184968756 + AluJo SINE Alu 5 291 -21 333 118 0 0 chr2 68287994 68288045 -184968538 + (CA)n Simple_repeat Simple_repeat 2 52 0 425 308 88 18 chr2 68288825 68289052 -184967531 + MIR SINE MIR 1 243 -19 670 226 20 27 chr2 68289131 68289277 -184967306 + MER58B DNA MER1_type 195 339 -2 2085 107 17 0 chr2 68290537 68290837 -184965746 + AluSx SINE Alu 3 307 -5 418 284 103 9 chr2 68291885 68292001 -184964582 + MIR3 SINE MIR 32 158 -50 196 222 0 22 chr2 68294417 68294462 -184962121 - MIR SINE MIR -131 77 34 706 223 101 64 chr2 68295260 68295464 -184961119 - L1MC4a LINE L1 -1736 6072 5846 2426 55 0 0 chr2 68295464 68295755 -184960828 - AluY SINE Alu -20 291 1 706 223 101 64 chr2 68295755 68295926 -184960657 - L1MC4a LINE L1 -1962 5846 5683 756 206 34 34 chr2 68296935 68297168 -184959415 + L1MC5 LINE L1 7551 7783 -178 582 249 110 3 chr2 68297476 68297648 -184958935 - MER5B DNA MER1_type 0 178 5 307 276 65 48 chr2 68298330 68298509 -184958074 - MIR SINE MIR -65 143 12 426 263 109 60 chr2 68299103 68299369 -184957214 + MARNA DNA Mariner 86 364 -222 432 288 143 1 chr2 68299680 68299870 -184956713 - MIR SINE MIR -31 231 19 474 279 64 60 chr2 68300083 68300334 -184956249 + MIR SINE MIR 2 253 -9 1057 201 54 29 chr2 68301287 68301600 -184954983 - MER33 DNA MER1_type 0 324 4 764 197 10 98 chr2 68303152 68303345 -184953238 - MER45A DNA AcHobo 0 178 3 181 314 0 88 chr2 68303585 68303687 -184952896 + L2 LINE L2 3214 3306 -7 2235 83 7 3 chr2 68303711 68304013 -184952570 - AluSx SINE Alu -9 303 1 2342 85 0 0 chr2 68304744 68305050 -184951533 + AluSq SINE Alu 1 306 -7 472 81 14 0 chr2 68305546 68305620 -184950963 + L1PA4 LINE L1 6081 6155 0 26 0 0 0 chr2 68306384 68306410 -184950173 + AT_rich Low_complexity Low_complexity 1 26 0 2062 111 27 0 chr2 68306531 68306829 -184949754 - AluSx SINE Alu -5 307 2 696 256 111 10 chr2 68309254 68309461 -184947122 + MIR SINE MIR 14 241 -21 1930 130 7 13 chr2 68309545 68309846 -184946737 + AluJb SINE Alu 1 299 -13 306 0 0 0 chr2 68309937 68309971 -184946612 + (CA)n Simple_repeat Simple_repeat 2 35 0 303 210 16 0 chr2 68309990 68310052 -184946531 + MER81 DNA DNA 52 114 0 340 254 140 45 chr2 68310057 68310321 -184946262 - L1ME4a LINE L1 -54 6067 5779 319 259 65 50 chr2 68310385 68310600 -184945983 - L1ME4a LINE L1 -434 5687 5469 1824 137 17 3 chr2 68310913 68311206 -184945377 - AluJb SINE Alu -4 308 12 2252 82 0 10 chr2 68312068 68312371 -184944212 - AluSx SINE Alu -7 305 6 189 74 0 0 chr2 68312543 68312570 -184944013 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 406 243 54 9 chr2 68312620 68312731 -184943852 + MIR SINE MIR 34 149 -113 468 286 30 42 chr2 68314357 68314525 -184942058 + MIR SINE MIR 97 262 0 372 297 200 15 chr2 68314738 68314933 -184941650 + MIR SINE MIR 32 262 0 412 310 128 45 chr2 68314967 68315280 -184941303 + L2 LINE L2 2933 3271 -1 6098 136 30 19 chr2 68316512 68317738 -184938845 + L1PB1 LINE L1 4523 5734 -417 1977 98 35 0 chr2 68317738 68318025 -184938558 + AluSq SINE Alu 1 297 -16 6098 136 30 19 chr2 68318025 68318122 -184938461 + L1PB1 LINE L1 5734 5828 -323 2306 77 7 0 chr2 68318122 68318422 -184938161 - AluSg SINE Alu -8 302 1 6098 136 30 19 chr2 68318422 68318719 -184937864 + L1PB1 LINE L1 5828 6151 0 540 277 107 14 chr2 68318838 68319127 -184937456 - HAL1 LINE L1 -208 2299 1984 291 189 122 14 chr2 68319733 68319807 -184936776 + MIR SINE MIR 62 143 -65 2234 78 7 0 chr2 68320643 68320936 -184935647 - AluSg SINE Alu -15 295 1 2196 88 7 0 chr2 68320938 68321233 -184935350 + L1PB1 LINE L1 5855 6151 0 534 285 133 75 chr2 68321352 68321757 -184934826 - HAL1 LINE L1 -208 2299 1852 376 162 0 0 chr2 68321757 68321825 -184934758 - L1PB1 LINE L1 -1 6150 6083 534 285 133 75 chr2 68321825 68321977 -184934606 - HAL1 LINE L1 -655 1852 1710 1858 128 7 29 chr2 68322224 68322530 -184934053 - AluSx SINE Alu -13 299 1 2236 52 0 17 chr2 68322768 68323080 -184933503 + AluY SINE Alu 1 307 0 333 0 0 0 chr2 68323192 68323229 -184933354 + (CA)n Simple_repeat Simple_repeat 1 37 0 1659 107 0 4 chr2 68323316 68323560 -184933023 + AluSg/x SINE Alu 67 309 -3 753 267 109 32 chr2 68323585 68323896 -184932687 - L2 LINE L2 -870 2444 2110 1664 132 37 22 chr2 68324544 68324817 -184931766 - AluJo SINE Alu -31 281 5 296 309 0 0 chr2 68324890 68324984 -184931599 + MER5A DNA MER1_type 13 106 -83 2248 96 3 6 chr2 68325177 68325490 -184931093 + AluSx SINE Alu 1 312 0 377 214 180 0 chr2 68325806 68325895 -184930688 - L2 LINE L2 0 3313 3209 283 318 34 0 chr2 68326389 68326477 -184930106 - MIR SINE MIR -118 144 54 280 203 122 14 chr2 68327277 68327351 -184929232 + MIR SINE MIR 62 143 -65 1868 102 11 7 chr2 68328187 68328470 -184928113 - AluY SINE Alu -15 296 13 322 311 191 16 chr2 68329461 68329644 -184926939 - MIR SINE MIR 0 262 48 2026 115 31 0 chr2 68329847 68330135 -184926448 - AluSg SINE Alu -13 297 1 368 282 59 26 chr2 68330301 68330465 -184926118 - MIR SINE MIR -59 203 31 1062 198 106 10 chr2 68330471 68330764 -184925819 + MER33 DNA MER1_type 3 323 -1 287 203 136 0 chr2 68330890 68330949 -184925634 + LTR8 LTR ERV1 521 587 -104 195 42 0 0 chr2 68330949 68330973 -184925610 + (A)n Simple_repeat Simple_repeat 1 24 0 2202 98 14 0 chr2 68331010 68331306 -184925277 + AluSc SINE Alu 1 300 -9 889 153 11 28 chr2 68331347 68331523 -184925060 + FRAM SINE Alu 1 173 -3 186 71 0 0 chr2 68331573 68331601 -184924982 + (TC)n Simple_repeat Simple_repeat 1 28 0 2439 54 0 0 chr2 68331734 68332032 -184924551 + AluY SINE Alu 1 298 -13 325 265 24 0 chr2 68332396 68332479 -184924104 - MIR SINE MIR -24 238 154 2138 91 13 3 chr2 68333103 68333411 -184923172 + AluY SINE Alu 1 311 0 287 270 9 45 chr2 68333455 68333566 -184923017 - MER5A DNA MER1_type -2 187 81 2995 170 79 10 chr2 68333631 68334213 -184922370 + LTR26E LTR ERV1 1 622 0 624 187 89 16 chr2 68336220 68336343 -184920240 - FLAM_C SINE Alu -1 132 1 601 104 42 0 chr2 68336354 68336450 -184920133 - L1MB3 LINE L1 -3 6180 6081 31 0 0 0 chr2 68336973 68337004 -184919579 + AT_rich Low_complexity Low_complexity 1 31 0 374 295 100 27 chr2 68338897 68339080 -184917503 + MIR3 SINE MIR 4 198 -10 2007 142 6 3 chr2 68339801 68340112 -184916471 - AluSx SINE Alu 0 312 1 21 0 0 0 chr2 68340179 68340200 -184916383 + AT_rich Low_complexity Low_complexity 1 21 0 507 217 119 42 chr2 68340213 68340356 -184916227 - MIR3 SINE MIR -21 187 34 297 0 0 0 chr2 68340836 68340869 -184915714 + (TG)n Simple_repeat Simple_repeat 2 34 0 2245 106 0 0 chr2 68341178 68341490 -184915093 + AluSx SINE Alu 1 312 0 209 265 108 24 chr2 68342685 68342768 -184913815 + MER5A DNA MER1_type 98 187 -2 181 328 52 17 chr2 68343019 68343135 -184913448 - MIR SINE MIR -44 218 99 207 310 100 30 chr2 68343161 68343261 -184913322 + MIR SINE MIR 31 137 -71 288 0 0 0 chr2 68343329 68343361 -184913222 + (CA)n Simple_repeat Simple_repeat 2 33 0 249 146 0 0 chr2 68343361 68343409 -184913174 + (TC)n Simple_repeat Simple_repeat 1 48 0 205 226 9 139 chr2 68343668 68343783 -184912800 + L2 LINE L2 3191 3290 -23 238 276 0 53 chr2 68344761 68344837 -184911746 + MIR SINE MIR 47 118 -90 1887 124 3 51 chr2 68345022 68345337 -184911246 - AluSp SINE Alu -13 300 1 218 363 25 0 chr2 68345640 68345720 -184910863 - L2 LINE L2 -1 3271 3190 1028 172 0 0 chr2 68345732 68345895 -184910688 + FRAM SINE Alu 4 166 0 232 199 0 9 chr2 68345917 68346185 -184910398 + AluJo SINE Alu 2 308 0 321 305 32 0 chr2 68346286 68346381 -184910202 + L1M4 LINE L1 4120 4217 -1929 1425 126 17 70 chr2 68348298 68348600 -184907983 - AluJo SINE Alu 0 312 27 714 237 60 56 chr2 68349071 68349286 -184907297 + MIR SINE MIR 10 225 -37 270 210 210 0 chr2 68349290 68349371 -184907212 + MIR SINE MIR 90 187 -75 451 290 60 60 chr2 68349416 68349599 -184906984 - MIR SINE MIR -17 245 63 242 308 48 20 chr2 68349708 68349854 -184906729 + L1MC5 LINE L1 7634 7783 -178 23 0 0 0 chr2 68352213 68352236 -184904347 + GC_rich Low_complexity Low_complexity 1 23 0 21 82 0 0 chr2 68352593 68352642 -184903941 + GC_rich Low_complexity Low_complexity 1 49 0 2154 81 13 3 chr2 68354235 68354544 -184902039 + AluSp SINE Alu 1 312 -1 2088 127 0 0 chr2 68354700 68354999 -184901584 + AluSq SINE Alu 1 299 -14 289 281 115 14 chr2 68355738 68355877 -184900706 + MIR SINE MIR 48 200 -62 29 78 0 0 chr2 68356838 68356902 -184899681 + GC_rich Low_complexity Low_complexity 1 64 0 23 33 0 0 chr2 68357231 68357261 -184899322 + GC_rich Low_complexity Low_complexity 1 30 0 182 317 89 24 chr2 68358214 68358337 -184898246 - L2 LINE L2 -39 3233 3103 520 293 26 44 chr2 68358723 68358952 -184897631 + Charlie8 DNA MER1_type 7 231 -2186 286 98 24 0 chr2 68359213 68359254 -184897329 + LTR16A1 LTR ERVL 414 455 -2 185 359 109 25 chr2 68359358 68359634 -184896949 - L2 LINE L2 -576 2738 2440 694 228 20 40 chr2 68359803 68360005 -184896578 + MLT1K LTR MaLR 389 586 -2 1215 200 139 76 chr2 68360495 68360869 -184895714 - MLT1H LTR MaLR 0 549 132 2197 105 0 3 chr2 68360869 68361182 -184895401 + AluSq SINE Alu 1 312 -1 1215 200 139 76 chr2 68361182 68361323 -184895260 - MLT1H LTR MaLR -417 132 1 2202 118 0 10 chr2 68361359 68361723 -184894860 - AluSx SINE Alu 0 361 1 1647 171 13 3 chr2 68361725 68362023 -184894560 - AluJo SINE Alu -11 301 1 376 199 15 37 chr2 68362041 68362177 -184894406 + (TA)n Simple_repeat Simple_repeat 2 134 0 452 216 0 7 chr2 68362605 68362744 -184893839 + (ATGGTG)n Simple_repeat Simple_repeat 5 142 0 1951 126 10 13 chr2 68362877 68363186 -184893397 + AluSc SINE Alu 1 308 -1 474 268 109 75 chr2 68363282 68363547 -184893036 + L2 LINE L2 2998 3271 -1 353 257 63 46 chr2 68363708 68363860 -184892723 - MIR3 SINE MIR -4 204 42 239 231 0 0 chr2 68364098 68364150 -184892433 + MLT1L LTR MaLR 158 209 -406 419 257 36 65 chr2 68364214 68364546 -184892037 + MLT1L LTR MaLR 220 597 -18 21 0 0 0 chr2 68364903 68364924 -184891659 + AT_rich Low_complexity Low_complexity 1 21 0 2514 50 0 0 chr2 68364927 68365229 -184891354 + AluY SINE Alu 1 302 -9 674 201 7 50 chr2 68365231 68365370 -184891213 + FLAM_A SINE Alu 1 133 0 809 20 0 10 chr2 68365493 68365593 -184890990 + (TTTC)n Simple_repeat Simple_repeat 2 100 0 1887 96 39 0 chr2 68365596 68365856 -184890727 - AluSc SINE Alu -35 274 5 1758 167 0 0 chr2 68365863 68366157 -184890426 - AluJb SINE Alu -18 294 1 21 0 0 0 chr2 68366167 68366188 -184890395 + AT_rich Low_complexity Low_complexity 1 21 0 1921 118 7 0 chr2 68366197 68366484 -184890099 + AluSq SINE Alu 14 302 -11 1150 93 17 12 chr2 68366491 68366663 -184889920 - L1MA2 LINE L1 0 6304 6132 1367 24 18 0 chr2 68366663 68366829 -184889754 - AluY SINE Alu -16 295 127 6105 126 8 24 chr2 68366832 68367202 -184889381 - L1MA2 LINE L1 -172 6132 5758 2288 97 3 0 chr2 68367202 68367510 -184889073 - AluSg SINE Alu -1 309 1 6105 126 8 24 chr2 68367510 68367907 -184888676 - L1MA2 LINE L1 -546 5758 5356 2353 97 0 0 chr2 68367907 68368218 -184888365 - AluSq SINE Alu -2 311 1 6105 126 8 24 chr2 68368218 68369308 -184887275 - L1MA2 LINE L1 -948 5356 4303 746 253 57 25 chr2 68369310 68369591 -184886992 - AluJb SINE Alu 0 312 23 1457 167 44 10 chr2 68369800 68370094 -184886489 - AluJb SINE Alu 0 312 9 1589 155 0 65 chr2 68370100 68370154 -184886429 - L1MA2 LINE L1 -1829 4317 4261 2380 75 0 0 chr2 68370154 68370459 -184886124 - AluSc SINE Alu -2 307 3 1589 155 0 65 chr2 68370459 68370726 -184885857 - L1MA2 LINE L1 -1885 4261 4017 309 248 178 10 chr2 68370726 68370827 -184885756 - L1ME4a LINE L1 -116 6005 5888 375 273 134 26 chr2 68371617 68371848 -184884735 + L2 LINE L2 1802 2057 -1257 199 178 20 168 chr2 68371927 68372028 -184884555 - MIR SINE MIR 0 262 177 957 225 52 0 chr2 68372033 68372246 -184884337 - MER58A DNA MER1_type 0 224 1 203 188 0 83 chr2 68372246 68372294 -184884289 + L2 LINE L2 3189 3232 -81 606 301 30 0 chr2 68372343 68372509 -184884074 - MIR SINE MIR -91 171 1 266 238 154 21 chr2 68372782 68372925 -184883658 - L2 LINE L2 -452 2862 2701 25 31 0 0 chr2 68372929 68372961 -184883622 + AT_rich Low_complexity Low_complexity 1 32 0 2216 103 3 3 chr2 68373081 68373393 -184883190 + AluSx SINE Alu 1 312 0 267 270 104 9 chr2 68373466 68373581 -184883002 + LTR33 LTR ERVL 294 419 -102 712 184 16 0 chr2 68373594 68373719 -184882864 + MER106B DNA MER1_type 3 129 -930 333 255 10 20 chr2 68373780 68373882 -184882701 + LTR33 LTR ERVL 421 521 0 366 156 218 49 chr2 68373958 68374091 -184882492 + MIR SINE MIR 34 184 -78 258 358 98 25 chr2 68374125 68374483 -184882100 - L2 LINE L2 -2763 551 168 1435 209 55 16 chr2 68374537 68374848 -184881735 + MER58B DNA MER1_type 1 323 -18 1432 171 66 46 chr2 68374857 68375161 -184881422 + AluJb SINE Alu 3 312 0 243 218 18 36 chr2 68375189 68375244 -184881339 - MER91C DNA MER1_type -63 77 24 324 244 0 23 chr2 68375422 68375508 -184881075 + MLT1L LTR MaLR 1 84 -531 4675 192 91 15 chr2 68375535 68376598 -184879985 + L1MC4 LINE L1 6899 8042 0 369 260 132 86 chr2 68376603 68376907 -184879676 + MLT1J LTR MaLR 97 414 -97 612 322 136 29 chr2 68377029 68377641 -184878942 + L2 LINE L2 2069 2745 -569 312 77 0 0 chr2 68378039 68378078 -184878505 - U2 snRNA snRNA -149 39 1 2294 85 0 0 chr2 68378400 68378694 -184877889 - AluY SINE Alu -17 294 1 305 284 204 6 chr2 68378993 68379155 -184877428 + MIR SINE MIR 4 197 -65 387 280 148 39 chr2 68379159 68379341 -184877242 - L2 LINE L2 0 3313 3112 512 261 46 7 chr2 68379773 68379926 -184876657 + L2 LINE L2 2515 2673 -641 2285 87 0 3 chr2 68380556 68380867 -184875716 - AluY SINE Alu -1 310 1 284 210 218 8 chr2 68380951 68381075 -184875508 - L1MC4 LINE L1 0 8042 7893 418 270 56 56 chr2 68381160 68381356 -184875227 - L1MC4 LINE L1 -152 7890 7695 404 269 164 25 chr2 68381456 68381657 -184874926 + MIR SINE MIR 15 243 -19 325 274 162 26 chr2 68381819 68381936 -184874647 + L2 LINE L2 3180 3312 -1 2195 86 0 48 chr2 68382015 68382330 -184874253 - AluSc SINE Alu -9 300 1 356 244 50 84 chr2 68382405 68382524 -184874059 - MLT1H LTR MaLR -23 526 405 902 150 66 6 chr2 68383387 68383554 -184873029 + FRAM SINE Alu 1 169 -7 240 263 110 0 chr2 68383730 68383848 -184872735 + L1M4 LINE L1 4243 4373 -1773 761 222 0 14 chr2 68383856 68384111 -184872472 + FLAM_C SINE Alu 2 254 0 2652 109 10 18 chr2 68384185 68384578 -184872005 + MLT1B LTR MaLR 1 390 0 841 248 23 41 chr2 68385653 68385919 -184870664 - MIR SINE MIR -1 261 1 295 282 89 75 chr2 68387399 68387776 -184868807 - L2 LINE L2 -22 3250 2796 286 235 67 101 chr2 68387786 68387847 -184868736 - MER5B DNA MER1_type -62 116 59 2118 99 3 35 chr2 68387847 68388161 -184868422 - AluSx SINE Alu -8 304 1 286 235 67 101 chr2 68388161 68388218 -184868365 - MER5B DNA MER1_type -119 59 2 624 27 0 0 chr2 68388484 68388558 -184868025 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 2133 68 14 0 chr2 68388558 68388836 -184867747 - AluY SINE Alu -29 282 1 1351 174 9 93 chr2 68388840 68389161 -184867422 - AluJo SINE Alu -18 294 1 1051 249 36 18 chr2 68390405 68390630 -184865953 - MIR SINE MIR -21 241 13 230 313 168 22 chr2 68390735 68390914 -184865669 + L2 LINE L2 3102 3306 -7 2065 113 0 3 chr2 68391105 68391396 -184865187 - AluSx SINE Alu -22 290 1 24 32 0 0 chr2 68391590 68391621 -184864962 + AT_rich Low_complexity Low_complexity 1 31 0 1817 165 3 0 chr2 68391791 68392094 -184864489 - AluSx SINE Alu -8 304 1 23 0 0 0 chr2 68392104 68392127 -184864456 + AT_rich Low_complexity Low_complexity 1 23 0 851 161 0 0 chr2 68392137 68392267 -184864316 + FLAM_C SINE Alu 1 130 -3 1924 139 75 23 chr2 68392578 68392923 -184863660 + MLT1A1 LTR MaLR 3 365 0 184 184 41 41 chr2 68393119 68393168 -184863415 + L2 LINE L2 3014 3062 -210 1683 161 25 0 chr2 68393189 68393474 -184863109 + AluJo SINE Alu 1 292 -20 249 273 0 0 chr2 68393702 68393757 -184862826 - MIR SINE MIR -1 261 207 280 267 158 27 chr2 68393794 68393940 -184862643 + MER5A DNA MER1_type 21 185 -4 472 234 28 0 chr2 68393954 68394061 -184862522 - LTR37B LTR ERV1 -358 110 1 365 216 62 62 chr2 68394221 68394356 -184862227 - MIR SINE MIR -19 243 110 257 343 64 14 chr2 68395555 68395695 -184860888 - MIR3 SINE MIR -21 187 41 1877 143 124 12 chr2 68396156 68396578 -184860005 - MER31A LTR ERV1 -5 656 1 744 279 78 8 chr2 68397290 68397534 -184859049 - MIR SINE MIR 0 262 2 283 146 0 0 chr2 68397861 68397902 -184858681 - AluSc SINE Alu -23 276 236 606 114 0 114 chr2 68397902 68397992 -184858591 - LTR12 LTR ERV1 -133 581 505 2513 42 0 10 chr2 68397992 68398303 -184858280 - AluY SINE Alu -3 308 1 606 114 0 114 chr2 68398303 68398326 -184858257 - LTR12 LTR ERV1 -209 505 481 307 273 10 0 chr2 68398327 68398426 -184858157 - LTR30 LTR ERV1 -79 643 544 1268 143 5 14 chr2 68398536 68398745 -184857838 - LTR12 LTR ERV1 -507 207 1 1856 77 0 0 chr2 68398749 68398984 -184857599 - AluSc SINE Alu -74 235 1 839 184 6 0 chr2 68399548 68399711 -184856872 + FRAM SINE Alu 1 40 0 190 278 0 19 chr2 68399815 68399869 -184856714 + MIR SINE MIR 10 62 -200 181 310 11 46 chr2 68399952 68400039 -184856544 + MIR SINE MIR 176 259 -3 2134 116 0 0 chr2 68401522 68401825 -184854758 + AluSx SINE Alu 1 303 -9 717 155 17 0 chr2 68402377 68402493 -184854090 - FLAM_C SINE Alu -15 118 1 1008 111 0 0 chr2 68402669 68402804 -184853779 + AluSq/x SINE Alu 1 135 -178 1646 119 100 0 chr2 68402821 68403082 -184853501 + AluSc SINE Alu 1 287 -22 606 231 60 22 chr2 68403729 68403911 -184852672 - MIR SINE MIR -54 208 20 378 158 317 10 chr2 68403942 68404043 -184852540 + FLAM_A SINE Alu 2 133 0 1728 202 124 54 chr2 68404051 68404212 -184852371 - L1ME1 LINE L1 -8 6158 6010 2101 111 0 16 chr2 68404212 68404519 -184852064 - AluSx SINE Alu -10 302 1 1728 202 124 54 chr2 68404519 68404888 -184851695 - L1ME1 LINE L1 -156 6010 5588 1080 180 22 138 chr2 68405900 68405950 -184850633 - MER39 LTR ERV1 -50 657 603 2092 119 0 10 chr2 68405950 68406260 -184850323 + AluSx SINE Alu 1 307 -5 1080 180 22 138 chr2 68406260 68406321 -184850262 - MER39 LTR ERV1 -104 603 537 2127 118 3 0 chr2 68406321 68406626 -184849957 + AluSx SINE Alu 1 306 -6 1080 180 22 138 chr2 68406626 68406658 -184849925 - MER39 LTR ERV1 -170 537 503 2256 94 7 0 chr2 68406658 68406965 -184849618 - AluSx SINE Alu -3 309 1 1080 180 22 138 chr2 68406965 68407175 -184849408 - MER39 LTR ERV1 -204 503 343 876 167 204 18 chr2 68407176 68407397 -184849186 - AluSg1 SINE Alu -14 295 34 1535 190 0 14 chr2 68407445 68407740 -184848843 - AluJo SINE Alu -21 291 1 385 233 75 50 chr2 68407774 68407894 -184848689 - LTR48B LTR ERV1 -499 123 1 704 154 36 0 chr2 68408458 68408568 -184848015 + AluJo/FLAM SINE Alu 5 118 -194 1690 184 0 19 chr2 68408568 68408877 -184847706 - AluJo SINE Alu -9 303 1 187 266 181 11 chr2 68409819 68409913 -184846670 + L2 LINE L2 3185 3294 -19 896 221 65 15 chr2 68410107 68410306 -184846277 + MIR SINE MIR 13 221 -41 1126 250 82 19 chr2 68410388 68410704 -184845879 - LTR16C LTR ERVL 0 491 156 21 0 0 0 chr2 68411697 68411718 -184844865 + AT_rich Low_complexity Low_complexity 1 21 0 747 188 0 0 chr2 68411720 68411848 -184844735 - FLAM_C SINE Alu -5 128 1 1854 189 43 26 chr2 68411889 68411975 -184844608 + MLT1C LTR MaLR 6 89 -378 665 50 0 0 chr2 68411975 68412055 -184844528 - MADE1 DNA Mariner 0 80 1 1854 189 43 26 chr2 68412055 68412386 -184844197 + MLT1C LTR MaLR 89 430 -37 1847 132 0 4 chr2 68412764 68413044 -184843539 + AluJb SINE Alu 11 289 -23 534 283 0 0 chr2 68413288 68413447 -184843136 + L1ME4a LINE L1 5691 5849 -272 2094 120 3 0 chr2 68413671 68413972 -184842611 + AluSp SINE Alu 1 302 -11 2244 98 0 9 chr2 68413982 68414297 -184842286 + AluSx SINE Alu 1 312 0 254 313 0 12 chr2 68414734 68414814 -184841769 - L2 LINE L2 -8 3264 3186 388 296 109 48 chr2 68414845 68415075 -184841508 - MIR SINE MIR -17 245 2 1924 113 30 10 chr2 68415263 68415563 -184841020 + AluSq SINE Alu 5 310 -3 6755 127 25 8 chr2 68415700 68416825 -184839758 - L1MC1 LINE L1 -5 6328 5186 490 266 35 69 chr2 68417401 68417604 -184838979 + MIR SINE MIR 30 225 -37 2172 82 7 0 chr2 68417787 68418090 -184838493 + AluY SINE Alu 1 305 0 1918 143 0 3 chr2 68418118 68418412 -184838171 + AluJb SINE Alu 2 294 -18 479 257 19 130 chr2 68418637 68418681 -184837902 - MIR SINE MIR -12 250 203 2236 89 0 7 chr2 68418681 68418983 -184837600 - AluSc SINE Alu -9 300 1 479 257 19 130 chr2 68418983 68419052 -184837531 - MIR SINE MIR -59 203 128 2040 115 3 23 chr2 68419052 68419356 -184837227 - AluSq SINE Alu -13 300 3 479 257 19 130 chr2 68419356 68419494 -184837089 - MIR SINE MIR -134 128 23 2754 188 43 35 chr2 68419512 68419998 -184836585 - L1MA9 LINE L1 -38 6274 5780 378 57 0 0 chr2 68419998 68420051 -184836532 + (TG)n Simple_repeat Simple_repeat 2 54 0 2754 188 43 35 chr2 68420051 68420212 -184836371 - L1MA9 LINE L1 -532 5780 5622 1411 239 124 7 chr2 68420770 68421221 -184835362 - LTR33 LTR ERVL -3 518 15 401 279 12 48 chr2 68421232 68421442 -184835141 + L1MC4a LINE L1 5708 5821 -343 2143 99 0 3 chr2 68421514 68421806 -184834777 + AluSq SINE Alu 7 297 -16 608 231 82 62 chr2 68421963 68422171 -184834412 + MLT1L LTR MaLR 1 212 -403 1897 138 0 46 chr2 68422977 68423302 -184833281 - AluSg SINE Alu 0 310 1 322 238 60 0 chr2 68423932 68424016 -184832567 + MLT1L LTR MaLR 310 398 -217 2050 105 0 20 chr2 68424025 68424320 -184832263 + AluSg SINE Alu 1 289 -21 4829 69 41 57 chr2 68424429 68425213 -184831370 + SVA Other Other 96 866 -520 591 104 8 37 chr2 68425233 68425367 -184831216 + SVA Other Other 665 794 -592 6162 73 7 35 chr2 68425381 68426388 -184830195 + SVA Other Other 433 1413 0 1932 176 40 24 chr2 68426797 68427198 -184829385 - THE1C LTR MaLR -2 426 1 2021 199 7 7 chr2 68427331 68427737 -184828846 - L1ME1 LINE L1 -5 6161 5756 1851 83 0 4 chr2 68427737 68427977 -184828606 + AluSq SINE Alu 62 300 -13 1561 183 0 11 chr2 68427985 68428323 -184828260 - AluJo SINE Alu 0 335 1 1707 200 91 43 chr2 68428325 68428599 -184827984 - L1ME1 LINE L1 -583 5579 5320 2137 92 3 0 chr2 68428599 68428912 -184827671 - AluSp SINE Alu 0 315 2 1707 200 91 43 chr2 68428912 68429483 -184827100 - L1ME1 LINE L1 -842 5320 4692 204 321 0 0 chr2 68429547 68429600 -184826983 + MIR SINE MIR 51 103 -159 2048 135 0 13 chr2 68429673 68429984 -184826599 + AluSx SINE Alu 1 307 -5 568 217 21 3 chr2 68430167 68430295 -184826288 + MLT1I LTR MaLR 98 207 -202 265 363 49 0 chr2 68430697 68430799 -184825784 + LTR67 LTR ERVL 115 221 -336 290 242 55 47 chr2 68430808 68430936 -184825647 + LTR67 LTR ERVL 347 475 -82 1581 168 21 10 chr2 68431290 68431581 -184825002 - AluJb SINE Alu -14 298 5 1419 266 79 2 chr2 68431713 68432157 -184824426 - LTR16C LTR ERVL -9 482 5 557 314 7 13 chr2 68432313 68432466 -184824117 + L2 LINE L2 3117 3268 -4 1041 253 138 40 chr2 68434407 68434834 -184821749 + MLT1J LTR MaLR 27 495 -16 21 57 0 0 chr2 68436333 68436368 -184820215 + AT_rich Low_complexity Low_complexity 1 35 0 196 278 194 37 chr2 68436536 68436644 -184819939 + MIR SINE MIR 102 226 -36 222 62 0 0 chr2 68436845 68436877 -184819706 + (TG)n Simple_repeat Simple_repeat 1 32 0 2074 96 4 0 chr2 68436973 68437253 -184819330 + AluSp SINE Alu 1 281 -32 315 0 0 0 chr2 68437256 68437291 -184819292 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 189 261 22 0 chr2 68437685 68437731 -184818852 + MIR SINE MIR 76 122 -86 2116 147 37 3 chr2 68437942 68438268 -184818315 - MER1B DNA MER1_type 0 337 1 262 317 133 0 chr2 68438465 68438585 -184817998 + MIR SINE MIR 34 169 -93 1596 171 10 106 chr2 68438601 68438825 -184817758 + MLT1A2 LTR MaLR 1 168 -206 438 79 0 0 chr2 68438825 68438888 -184817695 + (TG)n Simple_repeat Simple_repeat 2 64 0 1596 171 10 106 chr2 68438888 68439077 -184817506 + MLT1A2 LTR MaLR 168 374 0 389 291 82 22 chr2 68439097 68439279 -184817304 - L2 LINE L2 0 3313 3121 574 279 39 39 chr2 68440646 68440796 -184815787 + L1MC4 LINE L1 7758 7907 -135 228 67 0 0 chr2 68440796 68440826 -184815757 + (TG)n Simple_repeat Simple_repeat 1 30 0 574 279 39 39 chr2 68440826 68440886 -184815697 + L1MC4 LINE L1 7907 7966 -76 923 171 81 43 chr2 68440886 68441097 -184815486 + MER20 DNA MER1_type 1 219 0 574 279 39 39 chr2 68441097 68441168 -184815415 + L1MC4 LINE L1 7965 8040 -2 2279 81 0 0 chr2 68441206 68441501 -184815082 + AluSx SINE Alu 1 295 -17 346 218 48 40 chr2 68441528 68441652 -184814931 - MER112 DNA MER1_type -135 125 1 767 241 70 53 chr2 68441752 68441980 -184814603 - MIR SINE MIR -22 240 9 634 116 0 151 chr2 68443941 68443990 -184812593 - L1MB3 LINE L1 -1 6182 6127 2543 73 0 0 chr2 68443990 68444290 -184812293 - AluY SINE Alu -11 300 1 634 116 0 151 chr2 68444290 68444321 -184812262 - L1MB3 LINE L1 -56 6127 6093 1598 156 48 0 chr2 68444321 68444441 -184812142 + AluJb SINE Alu 1 114 -210 257 0 30 0 chr2 68444441 68444474 -184812109 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1598 156 48 0 chr2 68444474 68444664 -184811919 + AluJb SINE Alu 114 324 0 634 116 0 151 chr2 68444664 68444753 -184811830 - L1MB3 LINE L1 -90 6093 6037 666 129 0 24 chr2 68444774 68444898 -184811685 - L1MB7 LINE L1 -19 6165 6045 810 151 7 27 chr2 68444917 68445063 -184811520 - HsTC2 DNA Tc2 -312 1586 1268 282 183 207 0 chr2 68445115 68445197 -184811386 - HsTC2 DNA Tc2 -1793 105 7 189 308 56 84 chr2 68445363 68445487 -184811096 + L2 LINE L2 3168 3289 -24 2486 70 0 0 chr2 68445487 68445786 -184810797 + AluY SINE Alu 1 299 -12 189 308 56 84 chr2 68445786 68445804 -184810779 + L2 LINE L2 3289 3306 -7 2303 120 0 0 chr2 68446038 68446339 -184810244 - AluSx SINE Alu -11 301 1 382 274 21 0 chr2 68447539 68447634 -184808949 + MER5A DNA MER1_type 13 109 -80 200 154 51 0 chr2 68447978 68448017 -184808566 + L2 LINE L2 3217 3257 -15 2057 119 0 29 chr2 68448211 68448522 -184808061 - AluSx SINE Alu -10 302 1 31 0 0 0 chr2 68448710 68448741 -184807842 + AT_rich Low_complexity Low_complexity 1 31 0 1626 169 52 0 chr2 68448741 68449013 -184807570 - AluJo SINE Alu -26 286 1 815 146 126 0 chr2 68449018 68449169 -184807414 + MER58A DNA MER1_type 45 214 -10 2357 112 0 3 chr2 68449170 68449483 -184807100 + AluSx SINE Alu 1 312 0 22 80 0 0 chr2 68449533 68449583 -184807000 + AT_rich Low_complexity Low_complexity 1 50 0 28 91 0 0 chr2 68449735 68449812 -184806771 + AT_rich Low_complexity Low_complexity 1 77 0 436 238 56 21 chr2 68449819 68449962 -184806621 - L1ME4a LINE L1 -5 6116 5969 26 0 0 0 chr2 68450078 68450104 -184806479 + AT_rich Low_complexity Low_complexity 1 26 0 890 170 57 0 chr2 68450146 68450307 -184806276 - AluJb SINE Alu 0 302 134 1838 144 46 11 chr2 68450307 68450591 -184805992 - AluSx SINE Alu -18 294 1 597 342 10 13 chr2 68450599 68450909 -184805674 - L1ME4a LINE L1 -301 5820 5512 1936 139 6 40 chr2 68450983 68451306 -184805277 - AluJo SINE Alu 0 312 1 1862 184 10 0 chr2 68452439 68452749 -184803834 - 7SLRNA srpRNA srpRNA 0 320 8 249 308 58 17 chr2 68453099 68453219 -184803364 + L2 LINE L2 3142 3266 -6 448 239 65 32 chr2 68453694 68453849 -184802734 + MIR SINE MIR 90 249 -13 2511 47 10 0 chr2 68453859 68454157 -184802426 + AluY SINE Alu 1 301 -10 315 71 0 0 chr2 68454851 68454893 -184801690 + (TG)n Simple_repeat Simple_repeat 1 42 0 835 244 63 0 chr2 68456827 68457032 -184799551 + MER20 DNA MER1_type 2 219 0 2188 60 50 33 chr2 68457801 68458103 -184798480 + AluY SINE Alu 1 307 -4 2072 124 14 0 chr2 68459009 68459299 -184797284 + AluSg SINE Alu 1 294 -16 889 137 0 0 chr2 68459329 68459460 -184797123 + FLAM_C SINE Alu 2 132 -1 1908 58 4 8 chr2 68459623 68459864 -184796719 - AluY SINE Alu 0 311 72 1483 110 5 18 chr2 68461517 68461736 -184794847 - AluSp SINE Alu -4 309 94 1343 228 112 55 chr2 68463569 68464133 -184792450 - L1MC5 LINE L1 -36 7925 7392 1208 138 13 40 chr2 68464133 68464358 -184792225 + MER20 DNA MER1_type 1 219 0 1343 228 112 55 chr2 68464358 68464500 -184792083 - L1MC5 LINE L1 -569 7392 7260 227 139 47 23 chr2 68464523 68464566 -184792017 + MER94 DNA DNA 25 68 -66 1703 183 6 16 chr2 68464699 68465010 -184791573 - AluJo SINE Alu -4 308 1 582 282 85 43 chr2 68465015 68465320 -184791263 - HAL1 LINE L1 -25 2482 2165 * 1308 254 113 26 chr2 68465314 68465767 -184790816 - HAL1 LINE L1 -1662 845 354 2891 181 23 97 chr2 68465770 68465885 -184790698 - L1MD2 LINE L1 -10 6229 6107 1897 134 3 18 chr2 68465885 68466169 -184790414 + AluJb SINE Alu 3 282 -30 2891 181 23 97 chr2 68466169 68467344 -184789239 - L1MD2 LINE L1 -132 6107 5049 1976 123 0 4 chr2 68467377 68467654 -184788929 + AluSx SINE Alu 1 276 -36 261 0 0 0 chr2 68467666 68467695 -184788888 + (CAA)n Simple_repeat Simple_repeat 2 30 0 748 201 8 0 chr2 68467703 68467837 -184788746 - FRAM SINE Alu -30 146 12 990 194 118 89 chr2 68467843 68468178 -184788405 - L1MD2 LINE L1 -1144 5071 4722 2214 115 0 0 chr2 68468178 68468473 -184788110 - AluSx SINE Alu -12 300 6 990 194 118 89 chr2 68468473 68468519 -184788064 - L1MD2 LINE L1 -1493 4722 4679 328 213 13 0 chr2 68468601 68468676 -184787907 - L1MD2 LINE L1 -1527 4688 4613 * 1407 205 67 115 chr2 68468675 68468922 -184787661 - L1MD2 LINE L1 -2022 4193 3936 1939 133 43 7 chr2 68468922 68469222 -184787361 - AluSx SINE Alu -1 311 1 1407 205 67 115 chr2 68469222 68469268 -184787315 - L1MD2 LINE L1 -2279 3936 3889 1555 130 6 136 chr2 68469268 68469607 -184786976 - AluJb SINE Alu -17 295 1 1407 205 67 115 chr2 68469607 68469645 -184786938 - L1MD2 LINE L1 -2326 3889 3851 1896 108 73 7 chr2 68469645 68469932 -184786651 - AluSx SINE Alu -2 310 5 1407 205 67 115 chr2 68469932 68470207 -184786376 - L1MD2 LINE L1 -2364 3851 3614 755 238 56 20 chr2 68470202 68470504 -184786079 - L1MD2 LINE L1 -3013 3202 2890 * 580 228 31 12 chr2 68470988 68471150 -184785433 - L1MD2 LINE L1 -3322 2893 2729 * 853 252 8 33 chr2 68471145 68471387 -184785196 - L1MD2 LINE L1 -6150 246 11 535 279 13 7 chr2 68471365 68471519 -184785064 - HAL1 LINE L1 -2135 441 287 * 342 255 91 82 chr2 68471643 68471874 -184784709 - MER102b DNA MER1_type -3 338 106 2253 111 3 0 chr2 68471880 68472186 -184784397 - AluSc SINE Alu -2 307 1 396 267 20 41 chr2 68472423 68472569 -184784014 - MIR3 SINE MIR -8 200 58 234 259 0 0 chr2 68472636 68472690 -184783893 + L2 LINE L2 3255 3308 -5 281 232 37 24 chr2 68472736 68472818 -184783765 - MLT1J LTR MaLR -2 509 427 460 253 104 22 chr2 68472998 68473180 -184783403 - MLT1J LTR MaLR -310 201 5 261 0 0 0 chr2 68473934 68473963 -184782620 + (T)n Simple_repeat Simple_repeat 1 29 0 233 310 0 35 chr2 68474708 68474795 -184781788 + MLT1K LTR MaLR 310 393 -195 613 218 56 0 chr2 68474807 68474949 -184781634 + L2 LINE L2 2594 2743 -571 2161 98 7 14 chr2 68474955 68475251 -184781332 + AluSx SINE Alu 1 294 -18 878 251 27 5 chr2 68475279 68475498 -184781085 - MIR SINE MIR -11 251 28 502 309 80 55 chr2 68475626 68475988 -184780595 - MLT1K LTR MaLR -176 412 42 2268 98 0 43 chr2 68475990 68476345 -184780238 + AluSx SINE Alu 1 341 0 281 342 0 1 chr2 68476439 68476544 -184780039 - MIR SINE MIR -67 141 38 2402 97 0 0 chr2 68476564 68476874 -184779709 + AluSx SINE Alu 1 310 -2 202 172 0 35 chr2 68477412 68477470 -184779113 + CT-rich Low_complexity Low_complexity 4 59 0 1933 177 39 23 chr2 68478510 68478911 -184777672 - THE1C LTR MaLR -2 426 1 2022 199 7 7 chr2 68479044 68479450 -184777133 - L1ME1 LINE L1 -5 6161 5756 1963 83 0 4 chr2 68479450 68479691 -184776892 + AluSq SINE Alu 62 301 -12 1648 186 0 11 chr2 68479699 68480029 -184776554 - AluJo SINE Alu 0 327 1 1777 199 91 43 chr2 68480031 68480305 -184776278 - L1ME1 LINE L1 -583 5579 5320 2265 92 3 0 chr2 68480305 68480618 -184775965 - AluSp SINE Alu 0 315 2 1777 199 91 43 chr2 68480618 68481189 -184775394 - L1ME1 LINE L1 -842 5320 4692 183 321 0 0 chr2 68481253 68481306 -184775277 + MIR SINE MIR 51 103 -159 2170 129 0 19 chr2 68481379 68481690 -184774893 + AluSx SINE Alu 1 305 -7 565 217 21 3 chr2 68481873 68482001 -184774582 + MLT1I LTR MaLR 98 207 -202 267 363 49 0 chr2 68482403 68482505 -184774078 + LTR67 LTR ERVL 115 221 -336 286 242 55 47 chr2 68482514 68482642 -184773941 + LTR67 LTR ERVL 347 475 -82 1679 172 21 10 chr2 68482996 68483287 -184773296 - AluJb SINE Alu -14 298 5 1430 253 92 16 chr2 68483419 68483865 -184772718 - LTR16C LTR ERVL -9 482 3 508 314 7 13 chr2 68484019 68484172 -184772411 + L2 LINE L2 3117 3268 -4 1029 253 138 40 chr2 68486114 68486541 -184770042 + MLT1J LTR MaLR 27 495 -16 21 57 0 0 chr2 68488041 68488076 -184768507 + AT_rich Low_complexity Low_complexity 1 35 0 222 62 0 0 chr2 68488553 68488585 -184767998 + (TG)n Simple_repeat Simple_repeat 1 32 0 2176 100 4 0 chr2 68488681 68488961 -184767622 + AluSp SINE Alu 1 281 -32 285 51 0 0 chr2 68488964 68489003 -184767580 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2104 147 37 3 chr2 68489654 68489980 -184766603 - MER1B DNA MER1_type 0 337 1 220 269 142 16 chr2 68490172 68490297 -184766286 + MIR SINE MIR 30 169 -62 1575 174 10 106 chr2 68490313 68490537 -184766046 + MLT1A2 LTR MaLR 1 168 -206 417 95 0 0 chr2 68490537 68490600 -184765983 + (TG)n Simple_repeat Simple_repeat 2 64 0 1575 174 10 106 chr2 68490600 68490789 -184765794 + MLT1A2 LTR MaLR 168 374 0 303 274 92 24 chr2 68490827 68490991 -184765592 - L2 LINE L2 -18 3295 3121 568 284 32 39 chr2 68492358 68492510 -184764073 + L1MC4 LINE L1 7758 7910 -132 312 91 0 0 chr2 68492510 68492554 -184764029 + (TG)n Simple_repeat Simple_repeat 1 44 0 568 284 32 39 chr2 68492554 68492614 -184763969 + L1MC4 LINE L1 7910 7969 -73 920 171 81 43 chr2 68492614 68492825 -184763758 + MER20 DNA MER1_type 1 219 0 568 284 32 39 chr2 68492825 68492896 -184763687 + L1MC4 LINE L1 7969 8040 -2 2420 81 0 0 chr2 68492934 68493229 -184763354 + AluSx SINE Alu 1 295 -17 350 218 48 40 chr2 68493256 68493380 -184763203 - MER112 DNA MER1_type -135 125 1 770 242 69 52 chr2 68493480 68493711 -184762872 - MIR SINE MIR -22 240 6 578 116 0 151 chr2 68495669 68495718 -184760865 - L1MB3 LINE L1 -1 6182 6127 2574 70 0 0 chr2 68495718 68496020 -184760563 - AluY SINE Alu -9 302 1 578 116 0 151 chr2 68496020 68496051 -184760532 - L1MB3 LINE L1 -56 6127 6093 1673 156 44 0 chr2 68496051 68496172 -184760411 + AluJb SINE Alu 1 115 -201 257 0 30 0 chr2 68496172 68496205 -184760378 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1673 156 44 0 chr2 68496205 68496387 -184760196 + AluJb SINE Alu 115 316 0 578 116 0 151 chr2 68496387 68496476 -184760107 - L1MB3 LINE L1 -90 6093 6037 623 145 0 24 chr2 68496496 68496620 -184759963 - L1MB7 LINE L1 -19 6165 6045 756 158 7 27 chr2 68496639 68496785 -184759798 - HsTC2 DNA Tc2 -312 1586 1268 263 183 207 0 chr2 68496837 68496919 -184759664 - HsTC2 DNA Tc2 -1793 105 7 235 332 42 84 chr2 68497038 68497209 -184759374 + L2 LINE L2 3125 3289 -24 2525 67 0 0 chr2 68497209 68497508 -184759075 + AluY SINE Alu 1 299 -12 235 332 42 84 chr2 68497508 68497526 -184759057 + L2 LINE L2 3289 3306 -7 2317 125 0 0 chr2 68497757 68498061 -184758522 - AluSx SINE Alu -8 304 1 442 291 166 0 chr2 68499261 68499412 -184757171 + MER5A DNA MER1_type 13 188 -1 219 154 51 0 chr2 68499700 68499739 -184756844 + L2 LINE L2 3217 3257 -15 2038 125 0 29 chr2 68499933 68500244 -184756339 - AluSx SINE Alu -10 302 1 882 154 104 40 chr2 68500388 68500432 -184756151 + MER58A DNA MER1_type 1 41 -2379 1691 168 46 20 chr2 68500432 68500735 -184755848 - AluJo SINE Alu -1 311 1 882 154 104 40 chr2 68500735 68500891 -184755692 + MER58A DNA MER1_type 41 214 -10 2400 109 0 3 chr2 68500892 68501205 -184755378 + AluSx SINE Alu 1 312 0 324 232 71 121 chr2 68501277 68501475 -184755108 + L1ME4a LINE L1 5931 6118 -3 27 49 0 0 chr2 68501494 68501535 -184755048 + AT_rich Low_complexity Low_complexity 1 41 0 403 238 56 21 chr2 68501542 68501685 -184754898 - L1ME4a LINE L1 -5 6116 5969 363 325 62 19 chr2 68501695 68501855 -184754728 - L1ME4a LINE L1 -119 6002 5836 896 170 57 0 chr2 68501869 68502030 -184754553 - AluJb SINE Alu 0 302 134 1847 148 46 11 chr2 68502030 68502314 -184754269 - AluSx SINE Alu -18 294 1 557 342 10 13 chr2 68502322 68502632 -184753951 - L1ME4a LINE L1 -301 5820 5512 1959 142 6 40 chr2 68502706 68503029 -184753554 - AluJo SINE Alu 0 312 1 1865 186 10 0 chr2 68504162 68504468 -184752115 - 7SLRNA srpRNA srpRNA -4 316 8 301 308 58 17 chr2 68504818 68504938 -184751645 + L2 LINE L2 3142 3266 -6 526 234 63 46 chr2 68505393 68505568 -184751015 + MIR SINE MIR 72 249 -13 2519 44 10 0 chr2 68505578 68505875 -184750708 + AluY SINE Alu 1 300 -11 351 65 0 0 chr2 68506569 68506615 -184749968 + (TG)n Simple_repeat Simple_repeat 1 46 0 860 249 63 0 chr2 68508549 68508754 -184747829 + MER20 DNA MER1_type 2 219 0 2280 56 46 30 chr2 68509523 68509827 -184746756 + AluY SINE Alu 1 309 -2 2091 124 14 0 chr2 68510733 68511023 -184745560 + AluSg SINE Alu 1 294 -16 912 137 0 0 chr2 68511053 68511184 -184745399 + FLAM_C SINE Alu 2 132 -1 2568 67 0 6 chr2 68511347 68511660 -184744923 - AluY SINE Alu 0 311 1 2430 60 0 0 chr2 68511689 68512019 -184744564 + AluSg SINE Alu 2 331 0 395 145 0 14 chr2 68512671 68512740 -184743843 + L1MB7 LINE L1 6098 6165 -19 479 155 43 60 chr2 68512744 68512860 -184743723 + Zaphod DNA AcHobo 3906 4019 -12 396 305 48 88 chr2 68512928 68513086 -184743497 - L2 LINE L2 -436 2878 2715 2247 109 0 3 chr2 68513086 68513379 -184743204 - AluSg SINE Alu -18 292 1 396 305 48 88 chr2 68513379 68513662 -184742921 - L2 LINE L2 -599 2715 2455 184 282 92 101 chr2 68513726 68514141 -184742442 - L2 LINE L2 -1117 2197 1787 198 0 0 0 chr2 68514188 68514210 -184742373 + (T)n Simple_repeat Simple_repeat 1 22 0 2111 113 65 0 chr2 68514361 68514654 -184741929 - AluSx SINE Alu 0 312 1 22 0 0 0 chr2 68514662 68514684 -184741899 + AT_rich Low_complexity Low_complexity 1 22 0 1486 200 39 101 chr2 68515818 68516071 -184740512 - MLT1C LTR MaLR -4 463 254 1681 172 38 3 chr2 68516071 68516361 -184740222 - AluJb SINE Alu -10 302 3 1486 200 39 101 chr2 68516361 68516601 -184739982 - MLT1C LTR MaLR -213 254 1 382 288 166 0 chr2 68516602 68516741 -184739842 + MIR SINE MIR 85 246 -16 435 38 0 0 chr2 68516748 68516801 -184739782 + (CAT)n Simple_repeat Simple_repeat 3 55 0 207 296 19 0 chr2 68517240 68517294 -184739289 + MER5A DNA MER1_type 22 76 -113 595 238 125 42 chr2 68517458 68517554 -184739029 + MER5A DNA MER1_type 2 89 -100 970 195 76 116 chr2 68517554 68517934 -184738649 + MLT1A1 LTR MaLR 1 365 0 595 238 125 42 chr2 68517934 68518005 -184738578 + MER5A DNA MER1_type 89 183 -6 402 336 79 26 chr2 68518377 68518606 -184737977 + L3 LINE CR1 640 880 -697 357 100 13 227 chr2 68518639 68518701 -184737882 - L1MB3 LINE L1 -1 6179 6105 480 35 0 0 chr2 68518701 68518759 -184737824 + (TTTA)n Simple_repeat Simple_repeat 2 59 0 2385 71 0 0 chr2 68518759 68519041 -184737542 - AluY SINE Alu -29 282 1 2096 124 0 0 chr2 68519042 68519317 -184737266 - AluSx SINE Alu -14 298 24 357 100 13 227 chr2 68519317 68519401 -184737182 - L1MB3 LINE L1 -73 6107 6062 729 96 0 0 chr2 68519433 68519527 -184737056 + AluY SINE Alu 2 95 -216 924 98 0 8 chr2 68519529 68519652 -184736931 + AluSc SINE Alu 173 294 -15 1738 104 25 8 chr2 68519736 68519977 -184736606 + AluSg SINE Alu 40 284 -26 469 314 198 24 chr2 68520039 68520412 -184736171 + L3 LINE CR1 946 1383 -194 389 220 69 13 chr2 68520450 68520609 -184735974 + (TATATG)n Simple_repeat Simple_repeat 1 168 0 2640 96 120 5 chr2 68521062 68521446 -184735137 - MSTA LTR MaLR 0 428 1 2259 90 33 0 chr2 68522179 68522478 -184734105 + AluY SINE Alu 1 309 -2 360 356 43 11 chr2 68522552 68522740 -184733843 + MIR3 SINE MIR 4 197 -11 471 222 119 111 chr2 68523569 68523821 -184732762 - MER102b DNA MER1_type -51 290 37 201 147 0 0 chr2 68523893 68523927 -184732656 + (CAGA)n Simple_repeat Simple_repeat 3 36 0 1679 146 3 58 chr2 68524106 68524414 -184732169 - AluJb SINE Alu -21 291 1 333 119 119 0 chr2 68526099 68526166 -184730417 + MER3 DNA MER1_type 135 209 0 227 133 111 0 chr2 68526128 68526173 -184730410 - MER3 DNA MER1_type -119 90 41 * 2370 48 3 21 chr2 68526283 68526572 -184730011 + AluY SINE Alu 1 284 -27 5343 117 42 22 chr2 68526979 68527167 -184729416 - L1PA15 LINE L1 0 6165 5982 2381 74 10 7 chr2 68527167 68527463 -184729120 - AluSp SINE Alu -16 297 1 5343 117 42 22 chr2 68527463 68528242 -184728341 - L1PA15 LINE L1 -183 5982 5183 2340 100 3 0 chr2 68528242 68528541 -184728042 - AluSq SINE Alu -11 302 3 638 168 7 26 chr2 68528557 68528712 -184727871 + CT-rich Low_complexity Low_complexity 1 152 0 2205 92 4 0 chr2 68528723 68529004 -184727579 - AluSg SINE Alu -28 282 1 4623 190 4 20 chr2 68529004 68529982 -184726601 - L1PA15 LINE L1 -959 5187 4225 2071 120 13 22 chr2 68529982 68530298 -184726285 + AluSq SINE Alu 1 313 0 4623 190 4 20 chr2 68530298 68530353 -184726230 - L1PA15 LINE L1 -1921 4225 4171 2392 94 0 7 chr2 68530359 68530667 -184725916 - AluSx SINE Alu -6 306 1 22 70 0 0 chr2 68530720 68530763 -184725820 + AT_rich Low_complexity Low_complexity 1 43 0 1222 144 138 99 chr2 68530935 68531165 -184725418 + MLT1B LTR MaLR 22 272 -118 2181 131 3 6 chr2 68531165 68531478 -184725105 + AluJb SINE Alu 1 312 0 1222 144 138 99 chr2 68531478 68531602 -184724981 + MLT1B LTR MaLR 272 390 0 2716 33 0 0 chr2 68531607 68531909 -184724674 - AluY SINE Alu -9 302 1 201 255 43 0 chr2 68532127 68532174 -184724409 + MER5B DNA MER1_type 6 54 -124 2171 81 25 56 chr2 68532196 68532518 -184724065 + AluSx SINE Alu 1 312 0 548 248 16 0 chr2 68532524 68532649 -184723934 + MER5B DNA MER1_type 50 176 -2 391 270 67 34 chr2 68532705 68532883 -184723700 + L2 LINE L2 3130 3313 0 2487 82 0 13 chr2 68532899 68533216 -184723367 + AluSq SINE Alu 1 313 0 234 97 0 0 chr2 68534114 68534175 -184722408 + Alu SINE Alu 249 309 0 2441 103 0 0 chr2 68534629 68534939 -184721644 - AluSx SINE Alu 0 312 3 1146 196 27 32 chr2 68535305 68535525 -184721058 + MER20 DNA MER1_type 1 219 0 202 250 30 149 chr2 68535677 68535845 -184720738 + L2 LINE L2 3044 3191 -81 2256 106 40 0 chr2 68535994 68536295 -184720288 - AluSq SINE Alu 0 313 1 351 68 169 0 chr2 68536363 68536422 -184720161 + L1MB2 LINE L1 5785 5853 -318 814 82 0 0 chr2 68536424 68536521 -184720062 - AluSq SINE Alu -107 206 110 1370 198 6 47 chr2 68536521 68536804 -184719779 + L1MB2 LINE L1 5851 6121 -50 2303 104 10 3 chr2 68536804 68537102 -184719481 + AluSx SINE Alu 1 300 -12 1370 198 6 47 chr2 68537102 68537136 -184719447 + L1MB2 LINE L1 6121 6155 -16 766 104 19 0 chr2 68537297 68537403 -184719180 + BC200 scRNA scRNA 11 118 -82 2236 113 0 0 chr2 68537433 68537748 -184718835 + AluSx SINE Alu 1 312 0 258 241 0 0 chr2 68538427 68538481 -184718102 + CT-rich Low_complexity Low_complexity 2 55 0 2675 23 7 3 chr2 68538676 68538978 -184717605 - AluY SINE Alu -8 303 1 2325 109 0 0 chr2 68539388 68539682 -184716901 - AluSx SINE Alu -18 294 1 990 171 0 0 chr2 68539890 68540042 -184716541 + AluJb SINE Alu 140 291 -21 1806 169 10 10 chr2 68540043 68540338 -184716245 + AluJo SINE Alu 1 295 -17 722 268 66 0 chr2 68540369 68540597 -184715986 - MIR SINE MIR 0 262 20 252 256 26 0 chr2 68541239 68541317 -184715266 + LTR67 LTR ERVL 478 557 0 942 112 0 0 chr2 68541768 68541893 -184714690 - AluSq/x SINE Alu -188 125 1 262 261 179 0 chr2 68541893 68542027 -184714556 - L1ME LINE L1 -341 5780 5623 933 203 0 23 chr2 68542039 68542216 -184714367 - FRAM SINE Alu -4 172 1 441 0 0 0 chr2 68542346 68542395 -184714188 + (TG)n Simple_repeat Simple_repeat 2 50 0 2192 106 0 27 chr2 68542395 68542688 -184713895 - AluSx SINE Alu -27 285 1 203 186 34 17 chr2 68542731 68542790 -184713793 + T-rich Low_complexity Low_complexity 2 61 0 2529 61 0 0 chr2 68542886 68543180 -184713403 + AluY SINE Alu 1 294 -17 243 0 0 0 chr2 68543240 68543267 -184713316 + (T)n Simple_repeat Simple_repeat 1 27 0 2089 130 13 0 chr2 68543307 68543607 -184712976 - AluSx SINE Alu -8 304 1 2345 98 0 0 chr2 68543967 68544263 -184712320 - AluY SINE Alu -15 296 1 2099 92 14 45 chr2 68544384 68544676 -184711907 - AluSx SINE Alu -29 283 1 2384 71 0 0 chr2 68545397 68545724 -184710859 - AluY SINE Alu 0 329 3 255 103 0 0 chr2 68546192 68546231 -184710352 + (TG)n Simple_repeat Simple_repeat 2 40 0 2187 152 64 91 chr2 68546270 68546351 -184710232 - MLT1D LTR MaLR 0 505 423 1523 192 20 24 chr2 68546351 68546648 -184709935 - AluJo SINE Alu -16 296 1 2187 152 64 91 chr2 68546648 68546763 -184709820 - MLT1D LTR MaLR -82 423 306 2431 68 3 7 chr2 68546763 68547059 -184709524 - AluY SINE Alu -15 296 2 2187 152 64 91 chr2 68547059 68547380 -184709203 - MLT1D LTR MaLR -199 306 1 350 272 134 10 chr2 68547550 68547655 -184708928 + MIR SINE MIR 30 146 -63 599 242 52 0 chr2 68547817 68547970 -184708613 - LTR16B LTR ERVL 0 464 304 1972 137 3 26 chr2 68548685 68548991 -184707592 - AluSx SINE Alu -13 299 1 836 222 6 0 chr2 68549636 68549812 -184706771 - MER5A DNA MER1_type -2 187 11 240 294 0 0 chr2 68549815 68549907 -184706676 - MER5B DNA MER1_type -2 176 85 906 120 60 0 chr2 68549943 68550076 -184706507 - AluJb SINE Alu -171 141 1 203 121 0 0 chr2 68550076 68550109 -184706474 - MER5B DNA MER1_type -73 105 73 26 30 0 0 chr2 68550172 68550205 -184706378 + AT_rich Low_complexity Low_complexity 1 33 0 2870 196 50 84 chr2 68550206 68550524 -184706059 - L1ME1 LINE L1 -15 6545 6218 2271 111 0 0 chr2 68550524 68550822 -184705761 - AluSx SINE Alu -14 298 1 2870 196 50 84 chr2 68550822 68551335 -184705248 - L1ME1 LINE L1 -342 6218 5742 1011 199 48 95 chr2 68551348 68551540 -184705043 - L1ME1 LINE L1 -3644 2896 2767 1462 213 7 23 chr2 68551540 68551841 -184704742 - AluJo SINE Alu -16 296 1 1011 199 48 95 chr2 68551841 68552080 -184704503 - L1ME1 LINE L1 -3773 2767 2518 270 339 53 6 chr2 68552077 68552248 -184704335 - L1ME1 LINE L1 -4291 2249 2071 * 762 245 14 9 chr2 68552283 68552499 -184704084 + L1MDb LINE L1 1159 1375 -5034 2366 204 69 92 chr2 68552529 68553040 -184703543 - L1ME1 LINE L1 -4537 2003 1482 2318 105 3 3 chr2 68553040 68553345 -184703238 - AluSp SINE Alu -8 305 1 2366 204 69 92 chr2 68553345 68553412 -184703171 - L1ME1 LINE L1 -5058 1482 1415 1935 147 0 0 chr2 68553412 68553704 -184702879 - AluSx SINE Alu 0 312 21 2366 204 69 92 chr2 68553704 68553770 -184702813 - L1ME1 LINE L1 -5125 1415 1349 220 26 26 26 chr2 68553770 68553808 -184702775 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 2366 204 69 92 chr2 68553808 68554289 -184702294 - L1ME1 LINE L1 -5191 1349 937 306 271 165 35 chr2 68554368 68554538 -184702045 - L1ME1 LINE L1 -5609 921 730 282 56 0 0 chr2 68554798 68554834 -184701749 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 322 335 50 34 chr2 68554869 68555174 -184701409 - L1ME1 LINE L1 -5912 618 10 320 311 38 0 chr2 68558118 68558224 -184698359 - L2 LINE L2 0 3272 3163 6020 68 22 43 chr2 68558266 68559891 -184696692 - SVA Other Other -645 1386 114 347 149 194 0 chr2 68559992 68560059 -184696524 - AluS SINE Alu -219 84 5 253 118 0 59 chr2 68560067 68560118 -184696465 + L1MB2 LINE L1 6124 6171 0 745 104 19 0 chr2 68560159 68560265 -184696318 + BC200 scRNA scRNA 11 118 -82 2210 107 0 0 chr2 68560295 68560600 -184695983 + AluSx SINE Alu 1 305 0 230 226 19 0 chr2 68561289 68561342 -184695241 + CT-rich Low_complexity Low_complexity 2 55 0 2318 109 0 0 chr2 68561939 68562233 -184694350 - AluSx SINE Alu -18 294 1 963 178 0 0 chr2 68562441 68562593 -184693990 + AluJb SINE Alu 140 291 -21 1763 173 10 10 chr2 68562594 68562889 -184693694 + AluJo SINE Alu 1 295 -17 379 241 45 0 chr2 68562928 68563040 -184693543 - MIR SINE MIR -9 253 137 814 108 34 69 chr2 68563299 68563764 -184692819 - SVA Other Other -520 866 592 5562 60 14 63 chr2 68563787 68564639 -184691944 - SVA Other Other -520 866 57 270 0 0 0 chr2 68564639 68564669 -184691914 + (GGGAGA)n Simple_repeat Simple_repeat 1 30 0 2431 77 3 0 chr2 68564916 68565213 -184691370 + AluSp SINE Alu 1 298 -15 324 252 132 31 chr2 68566473 68566632 -184689951 - MLT1L LTR MaLR -9 606 432 406 274 54 43 chr2 68566711 68566897 -184689686 - MLT1L LTR MaLR -302 313 126 426 273 107 36 chr2 68566999 68567252 -184689331 - LTR16A LTR ERVL -23 427 157 192 186 0 23 chr2 68567650 68567693 -184688890 + L2 LINE L2 3272 3313 0 225 0 0 0 chr2 68567763 68567788 -184688795 + (TC)n Simple_repeat Simple_repeat 2 26 0 * 234 0 0 0 chr2 68567787 68567813 -184688770 + (TG)n Simple_repeat Simple_repeat 1 26 0 348 103 0 0 chr2 68567813 68567871 -184688712 + (GA)n Simple_repeat Simple_repeat 2 59 0 680 234 57 6 chr2 68568064 68568239 -184688344 - Charlie8 DNA MER1_type -2196 221 38 1004 158 147 0 chr2 68568261 68568451 -184688132 + MER20 DNA MER1_type 1 218 -1 4583 150 20 19 chr2 68568602 68569410 -184687173 + L1MB2 LINE L1 5363 6171 0 2294 99 10 3 chr2 68569725 68570027 -184686556 + AluSp SINE Alu 1 304 -9 218 116 0 47 chr2 68570295 68570338 -184686245 + (AGGGGG)n Simple_repeat Simple_repeat 3 43 0 410 0 20 0 chr2 68571103 68571153 -184685430 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 1053 168 0 22 chr2 68572552 68572731 -184683852 - FRAM SINE Alu -1 175 1 2316 102 0 3 chr2 68572772 68573076 -184683507 - AluSx SINE Alu 0 312 10 500 312 35 0 chr2 68574061 68574231 -184682352 + LTR16A1 LTR ERVL 280 455 -2 333 0 0 0 chr2 68575954 68575991 -184680592 + (CA)n Simple_repeat Simple_repeat 2 38 0 573 219 75 7 chr2 68576858 68577004 -184679579 + MER117 DNA MER1_type 2 157 -40 270 271 158 23 chr2 68577569 68577835 -184678748 - L1ME4a LINE L1 0 6121 5820 893 283 48 77 chr2 68578048 68578248 -184678335 - L1MC4a LINE L1 -1884 5924 5720 1340 182 40 68 chr2 68578248 68578544 -184678039 - AluJb SINE Alu -24 288 1 893 283 48 77 chr2 68578544 68579033 -184677550 - L1MC4a LINE L1 -2088 5720 5255 443 266 74 70 chr2 68579334 68579778 -184676805 - L1MC4a LINE L1 -1214 4932 4487 699 316 73 17 chr2 68579784 68580142 -184676441 - L1ME4a LINE L1 -286 5835 5458 365 288 107 13 chr2 68582445 68582678 -184673905 + MIR SINE MIR 2 256 -6 339 271 66 50 chr2 68583102 68583283 -184673300 + MIR SINE MIR 28 211 -51 1480 141 22 69 chr2 68583533 68583809 -184672774 - AluJo SINE Alu -11 301 39 743 150 8 16 chr2 68584323 68584450 -184672133 + FLAM_A SINE Alu 1 126 -7 306 288 147 6 chr2 68584981 68585144 -184671439 - MER91B DNA MER1_type -4 186 1 287 284 184 43 chr2 68585148 68585571 -184671012 - L2 LINE L2 -365 2949 2467 497 298 153 41 chr2 68585571 68586253 -184670330 - L2 LINE L2 -1193 2121 1364 515 250 116 110 chr2 68586550 68587086 -184669497 + LTR67 LTR ERVL 19 557 0 2328 113 0 3 chr2 68587476 68587786 -184668797 + AluSg SINE Alu 1 309 -1 795 279 107 68 chr2 68588198 68590088 -184666495 + L1ME1 LINE L1 2519 4578 -1568 2278 114 0 0 chr2 68590088 68590385 -184666198 - AluSx SINE Alu -15 297 1 795 279 107 68 chr2 68590385 68590702 -184665881 + L1ME1 LINE L1 4578 4881 -1265 1646 242 78 53 chr2 68590708 68591269 -184665314 + MLT1G1 LTR MaLR 1 575 -20 359 316 80 31 chr2 68591283 68591776 -184664807 + L1ME1 LINE L1 4957 5507 -671 2182 154 62 66 chr2 68591776 68592243 -184664340 - MLT1C LTR MaLR -2 465 1 359 316 80 31 chr2 68592243 68592403 -184664180 + L1ME1 LINE L1 5507 5658 -520 707 132 74 8 chr2 68592434 68592555 -184664028 - AluSq/x SINE Alu -180 133 5 367 338 19 9 chr2 68592584 68592794 -184663789 + L1ME1 LINE L1 5679 5890 -276 1993 142 0 17 chr2 68593097 68593386 -184663197 - AluSx SINE Alu -28 284 1 1906 155 17 0 chr2 68593946 68594236 -184662347 + AluJb SINE Alu 1 295 -17 2146 100 17 7 chr2 68594777 68595077 -184661506 - AluY SINE Alu -8 303 1 4246 127 18 43 chr2 68595265 68595378 -184661205 - L1MA6 LINE L1 -10 6290 6176 2326 109 0 3 chr2 68595378 68595680 -184660903 - AluSq SINE Alu -12 301 1 4246 127 18 43 chr2 68595680 68595734 -184660849 - L1MA6 LINE L1 -124 6176 6122 1985 150 6 13 chr2 68595734 68596048 -184660535 - AluJo SINE Alu 0 312 1 4246 127 18 43 chr2 68596048 68596638 -184659945 - L1MA6 LINE L1 -178 6122 5551 846 219 99 5 chr2 68596851 68597043 -184659540 + MER58C DNA MER1_type 3 212 -3 570 286 35 0 chr2 68597133 68597304 -184659279 - MIR SINE MIR -5 257 81 222 254 15 15 chr2 68597340 68597407 -184659176 + MIR SINE MIR 10 76 -186 249 159 0 0 chr2 68597692 68597736 -184658847 + (TG)n Simple_repeat Simple_repeat 1 44 0 892 238 19 19 chr2 68598228 68598434 -184658149 - MER63A DNA MER1_type -2 208 3 243 61 0 0 chr2 68598684 68598717 -184657866 + (TG)n Simple_repeat Simple_repeat 1 33 0 206 295 116 0 chr2 68600247 68600342 -184656241 - MIR3 SINE MIR -5 203 98 314 281 78 47 chr2 68601607 68601799 -184654784 - L2 LINE L2 0 3313 3116 245 250 79 13 chr2 68601912 68601988 -184654595 - MIR SINE MIR -110 98 18 2662 40 0 0 chr2 68602918 68603217 -184653366 - AluSc SINE Alu -10 299 1 2555 28 0 74 chr2 68603811 68604137 -184652446 + AluY SINE Alu 1 302 -9 653 146 18 18 chr2 68604762 68604872 -184651711 + MLT1B LTR MaLR 2 111 -279 1771 158 34 0 chr2 68604911 68605202 -184651381 + AluJo SINE Alu 12 312 0 2207 98 7 0 chr2 68605219 68605515 -184651068 + AluY SINE Alu 1 298 -13 1062 140 50 30 chr2 68605519 68605719 -184650864 + MLT1B LTR MaLR 112 315 -75 240 149 21 0 chr2 68605691 68605738 -184650845 + MSTC LTR MaLR 322 369 -59 * 1969 137 31 3 chr2 68605846 68606138 -184650445 - AluSx SINE Alu -12 300 1 216 163 0 0 chr2 68607365 68607408 -184649175 + (TGAA)n Simple_repeat Simple_repeat 1 43 0 275 102 61 0 chr2 68607644 68607693 -184648890 - Charlie7 DNA MER1_type -2511 101 50 220 257 0 43 chr2 68607814 68607884 -184648699 - L2 LINE L2 -8 3264 3198 2242 97 0 17 chr2 68608000 68608298 -184648285 + AluSx SINE Alu 1 293 -19 2027 134 3 34 chr2 68608466 68608787 -184647796 - AluJo SINE Alu -1 311 1 397 221 19 19 chr2 68609777 68609881 -184646702 + MER5A DNA MER1_type 9 112 -77 246 394 51 0 chr2 68610019 68610156 -184646427 + L2 LINE L2 3116 3259 -13 210 259 52 0 chr2 68610190 68610248 -184646335 + L2 LINE L2 3248 3308 -5 181 229 0 0 chr2 68610290 68610325 -184646258 + L2 LINE L2 3227 3261 -11 222 333 18 9 chr2 68611215 68611329 -184645254 - MIR SINE MIR -64 144 30 269 216 0 14 chr2 68612048 68612122 -184644461 + (CATATA)n Simple_repeat Simple_repeat 2 74 0 336 264 36 43 chr2 68614076 68614216 -184642367 - MIR SINE MIR 0 262 124 329 311 112 21 chr2 68614499 68614785 -184641798 - L1ME LINE L1 -544 5577 5266 291 346 50 6 chr2 68615073 68615232 -184641351 + L2 LINE L2 2873 3038 -234 1135 188 28 0 chr2 68615235 68615448 -184641135 + MER20 DNA MER1_type 1 219 0 899 206 54 5 chr2 68615726 68615930 -184640653 + MIR SINE MIR 2 215 -47 182 156 0 0 chr2 68619321 68619353 -184637230 - L3 LINE CR1 -311 1266 1235 2011 123 51 3 chr2 68619667 68619959 -184636624 + AluSx SINE Alu 1 306 -6 198 307 158 0 chr2 68620197 68620324 -184636259 + MIR SINE MIR 110 256 -6 863 224 15 0 chr2 68620608 68620804 -184635779 - MIR SINE MIR -32 230 32 2785 10 0 10 chr2 68622606 68622915 -184633668 + AluYa5 SINE Alu 1 306 -5 243 0 0 0 chr2 68622989 68623016 -184633567 + (CA)n Simple_repeat Simple_repeat 2 28 0 207 0 0 0 chr2 68623015 68623038 -184633545 + (GA)n Simple_repeat Simple_repeat 2 24 0 * 618 209 52 20 chr2 68623815 68623968 -184632615 - L1ME3A LINE L1 -5 6165 6008 2082 148 0 0 chr2 68624362 68624660 -184631923 - AluSx SINE Alu -14 298 1 646 186 10 126 chr2 68627883 68628082 -184628501 + MER5B DNA MER1_type 1 176 -2 1156 243 106 50 chr2 68628775 68629211 -184627372 + MLT1J LTR MaLR 3 462 -49 2218 113 0 7 chr2 68630604 68630906 -184625677 + AluSg SINE Alu 1 300 -10 237 196 71 0 chr2 68630916 68630972 -184625611 + MLT1J LTR MaLR 452 511 0 1747 192 3 0 chr2 68632331 68632623 -184623960 + AluJo SINE Alu 1 293 -19 781 249 70 19 chr2 68632663 68632876 -184623707 + MLT1J LTR MaLR 45 268 -243 425 254 35 0 chr2 68632884 68632998 -184623585 + MLT1J LTR MaLR 384 501 -10 1115 72 26 0 chr2 68633148 68633301 -184623282 - L1MA6 LINE L1 0 6300 6144 249 33 0 0 chr2 68633639 68633669 -184622914 + (TG)n Simple_repeat Simple_repeat 2 31 0 1119 291 106 18 chr2 68634009 68634508 -184622075 + MLT1L LTR MaLR 47 589 -26 627 220 153 0 chr2 68635020 68635170 -184621413 + MER5A DNA MER1_type 11 183 -6 28 71 0 0 chr2 68635536 68635592 -184620991 + AT_rich Low_complexity Low_complexity 1 56 0 381 243 61 68 chr2 68635670 68635983 -184620600 - L1MC4a LINE L1 -298 5823 5733 250 246 33 0 chr2 68636186 68636247 -184620336 - MLT1J1 LTR MaLR -127 319 257 373 198 188 0 chr2 68636266 68636367 -184620216 - MLT1J1 LTR MaLR -326 120 1 554 298 39 48 chr2 68636367 68636674 -184619909 - L1MC4a LINE L1 -2193 5615 5309 2030 126 7 7 chr2 68636674 68637004 -184619579 - AluSx SINE Alu 0 330 1 554 298 39 48 chr2 68637004 68637031 -184619552 - L1MC4a LINE L1 -2499 5309 5283 1488 242 17 17 chr2 68637133 68637493 -184619090 - LTR16A LTR ERVL 0 450 91 836 293 82 20 chr2 68637712 68638395 -184618188 - L1MDb LINE L1 -4500 1926 1219 1618 254 20 20 chr2 68638400 68638841 -184617742 - L1MDb LINE L1 -5627 789 349 235 185 19 0 chr2 68638841 68638895 -184617688 - L1M2 LINE L1 -4376 2473 2419 2113 203 7 38 chr2 68638985 68639358 -184617225 - MER70A LTR ERVL -67 405 45 2959 3 0 0 chr2 68639358 68639669 -184616914 + AluYa5 SINE Alu 1 311 0 2113 203 7 38 chr2 68639669 68639713 -184616870 - MER70A LTR ERVL -427 45 1 267 284 12 48 chr2 68639713 68639868 -184616715 - L1ME LINE L1 -4716 1666 1436 284 276 56 43 chr2 68640554 68640756 -184615827 - L1ME LINE L1 -5863 509 305 1258 168 3 18 chr2 68640913 68641224 -184615359 + MER2 DNA MER2_type 3 345 0 1357 208 55 39 chr2 68642164 68642673 -184613910 + L1MC5 LINE L1 7410 7926 -35 357 333 12 56 chr2 68643093 68643342 -184613241 - MIR SINE MIR -4 258 21 420 209 11 0 chr2 68644981 68645072 -184611511 - LTR16A1 LTR ERVL -40 417 326 947 277 109 0 chr2 68645081 68645348 -184611235 - MLT1G1 LTR MaLR -12 583 288 2332 130 28 22 chr2 68645522 68645884 -184610699 + THE1B LTR MaLR 1 364 0 894 143 0 30 chr2 68646024 68646157 -184610426 - FLAM_C SINE Alu -2 131 3 451 210 103 79 chr2 68646546 68646760 -184609823 + HAL1b LINE L1 208 426 -922 267 233 68 10 chr2 68647589 68647692 -184608891 + L1ME4a LINE L1 5957 6065 -56 25 51 0 0 chr2 68647943 68647982 -184608601 + AT_rich Low_complexity Low_complexity 1 39 0 2266 94 3 3 chr2 68648066 68648363 -184608220 + AluSq SINE Alu 1 297 -16 235 143 65 13 chr2 68648439 68648516 -184608067 + (TATAA)n Simple_repeat Simple_repeat 3 83 0 378 312 95 42 chr2 68648606 68648795 -184607788 - MIR3 SINE MIR -9 199 1 2301 67 11 3 chr2 68649237 68649562 -184607021 + AluSp SINE Alu 1 327 0 384 313 0 9 chr2 68653178 68653293 -184603290 - MIR SINE MIR -113 149 36 480 319 18 12 chr2 68654794 68654957 -184601626 + MIR SINE MIR 88 251 -11 1675 220 48 50 chr2 68655450 68655868 -184600715 + MLT1C LTR MaLR 6 424 -43 2181 121 0 3 chr2 68655868 68656166 -184600417 - AluSx SINE Alu -15 297 1 1675 220 48 50 chr2 68656166 68656210 -184600373 + MLT1C LTR MaLR 424 467 0 188 250 181 104 chr2 68656929 68657073 -184599510 - L2 LINE L2 -3 3269 3115 708 256 32 23 chr2 68657073 68657292 -184599291 - MIR SINE MIR -3 259 39 244 306 226 65 chr2 68657323 68657509 -184599074 + MIR SINE MIR 13 228 -34 379 200 0 25 chr2 68658233 68658313 -184598270 + L2 LINE L2 2987 3064 -208 180 0 0 0 chr2 68659455 68659475 -184597108 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 340 276 52 37 chr2 68659627 68659761 -184596822 + MIR SINE MIR 11 146 -116 27 0 0 0 chr2 68659914 68659941 -184596642 + AT_rich Low_complexity Low_complexity 1 27 0 30 0 0 0 chr2 68660038 68660068 -184596515 + AT_rich Low_complexity Low_complexity 1 30 0 970 166 60 40 chr2 68660068 68660267 -184596316 - AluJo SINE Alu -24 288 86 699 213 156 14 chr2 68660267 68660478 -184596105 - L1MC4a LINE L1 -1982 5826 5586 251 308 30 24 chr2 68660631 68660749 -184595834 + MIR SINE MIR 20 139 -69 181 220 60 20 chr2 68660747 68660797 -184595786 + L2 LINE L2 3258 3309 -4 * 806 216 0 65 chr2 68661061 68661186 -184595397 + MER5B DNA MER1_type 1 112 -66 2337 102 7 0 chr2 68661186 68661491 -184595092 - AluSq SINE Alu -6 307 1 806 216 0 65 chr2 68661491 68661550 -184595033 + MER5B DNA MER1_type 112 173 -5 181 235 59 44 chr2 68661797 68661865 -184594718 - L2 LINE L2 0 3272 3204 1308 139 5 19 chr2 68665132 68665340 -184591243 + L1PA16 LINE L1 5962 6166 0 8699 209 61 55 chr2 68666244 68667853 -184588730 + L1MD2 LINE L1 2533 4131 -2228 315 0 0 0 chr2 68667853 68667888 -184588695 + (CA)n Simple_repeat Simple_repeat 2 36 0 8699 209 61 55 chr2 68667888 68669867 -184586716 + L1MD2 LINE L1 4131 6139 -220 447 63 0 0 chr2 68669867 68669930 -184586653 + (CA)n Simple_repeat Simple_repeat 2 64 0 8699 209 61 55 chr2 68669930 68670139 -184586444 + L1MD2 LINE L1 6139 6345 -14 2412 83 10 0 chr2 68671270 68671583 -184585000 - THE1B LTR MaLR -48 316 1 618 293 73 0 chr2 68672056 68672247 -184584336 - L2 LINE L2 -280 3033 2829 2490 231 20 4 chr2 68672266 68672804 -184583779 + L1ME3 LINE L1 5616 6162 0 830 300 119 3 chr2 68672838 68673191 -184583392 - L2 LINE L2 -496 2818 2425 602 207 165 58 chr2 68673249 68673593 -184582990 + MLT1J LTR MaLR 81 496 -15 269 257 191 0 chr2 68673617 68673722 -184582861 - L2 LINE L2 -986 2328 2204 578 176 26 20 chr2 68674905 68675058 -184581525 + CT-rich Low_complexity Low_complexity 2 155 0 707 22 33 0 chr2 68675063 68675154 -184581429 + (TTTTC)n Simple_repeat Simple_repeat 3 96 0 1584 163 0 0 chr2 68675154 68675393 -184581190 - AluSx SINE Alu -34 278 40 258 223 16 50 chr2 68675567 68675584 -184580999 + (TAA)n Simple_repeat Simple_repeat 3 19 -100 2172 143 56 26 chr2 68675584 68675961 -184580622 - MLT1B LTR MaLR 0 390 3 258 223 16 50 chr2 68675961 68676064 -184580519 + (TAA)n Simple_repeat Simple_repeat 19 119 0 474 273 210 0 chr2 68676072 68676277 -184580306 - MIR SINE MIR -12 250 3 324 0 0 0 chr2 68677240 68677276 -184579307 + (TG)n Simple_repeat Simple_repeat 1 36 0 442 209 22 0 chr2 68678502 68678593 -184577990 + MER5A DNA MER1_type 9 101 -88 2206 127 55 19 chr2 68678613 68678975 -184577608 + THE1C LTR MaLR 1 375 0 328 310 47 16 chr2 68679398 68679527 -184577056 + MIR3 SINE MIR 72 204 -4 437 268 20 71 chr2 68680862 68681060 -184575523 - MER5A DNA MER1_type -1 188 1 2037 66 0 0 chr2 68681155 68681398 -184575185 - L1PA5 LINE L1 0 6154 5912 935 270 42 0 chr2 68681492 68681729 -184574854 + MIR SINE MIR 10 256 -6 537 232 155 7 chr2 68682506 68682661 -184573922 - MER5B DNA MER1_type 0 178 1 1228 184 33 5 chr2 68682806 68683018 -184573565 + MER20 DNA MER1_type 2 219 0 256 326 11 22 chr2 68683021 68683113 -184573470 - MIR3 SINE MIR -51 157 67 384 40 0 0 chr2 68683604 68683654 -184572929 + (TG)n Simple_repeat Simple_repeat 2 51 0 502 257 53 47 chr2 68683925 68684096 -184572487 - MER5B DNA MER1_type -6 172 1 599 230 26 7 chr2 68684104 68684256 -184572327 - MER5B DNA MER1_type -1 177 23 231 146 0 0 chr2 68685381 68685422 -184571161 + (GA)n Simple_repeat Simple_repeat 1 41 0 550 287 30 0 chr2 68686864 68687028 -184569555 - MIR SINE MIR -31 231 63 557 238 106 13 chr2 68687854 68688005 -184568578 - MIR SINE MIR -23 239 75 2375 219 38 126 chr2 68688010 68688900 -184567683 + MER21B LTR ERV1 1 812 -51 25 31 0 0 chr2 68689439 68689471 -184567112 + AT_rich Low_complexity Low_complexity 1 32 0 364 307 2 0 chr2 68689576 68689702 -184566881 + HAL1b LINE L1 457 1667 -791 23 54 0 0 chr2 68689868 68689905 -184566678 + AT_rich Low_complexity Low_complexity 1 37 0 2193 122 3 16 chr2 68691071 68691383 -184565200 + AluSx SINE Alu 1 308 -4 503 288 84 10 chr2 68691564 68691920 -184564663 - MLT1I LTR MaLR -18 391 1 1055 260 20 4 chr2 68692374 68692628 -184563955 + MIR SINE MIR 4 261 -1 313 360 103 32 chr2 68692629 68692882 -184563701 + L2 LINE L2 2999 3269 -3 686 211 76 52 chr2 68692894 68693182 -184563401 + MLT1J2 LTR MaLR 2 334 -116 4152 114 18 34 chr2 68694145 68694767 -184561816 - LTR9 LTR ERV1 0 612 1 2175 117 0 3 chr2 68695017 68695317 -184561266 - AluSx SINE Alu -13 299 1 611 250 15 0 chr2 68695794 68695926 -184560657 + MER94 DNA DNA 1 134 0 362 314 91 57 chr2 68696066 68696438 -184560145 + MLT1J2 LTR MaLR 65 449 -1 197 293 93 27 chr2 68696490 68696565 -184560018 - L2 LINE L2 -59 3213 3134 27 0 0 0 chr2 68696804 68696831 -184559752 + AT_rich Low_complexity Low_complexity 1 27 0 3271 178 20 90 chr2 68696843 68697684 -184558899 - L1PA5 LINE L1 -3 6151 5370 6364 72 6 6 chr2 68696847 68698561 -184558022 - L1PA13 LINE L1 -1 6162 4493 348 64 0 0 chr2 68699230 68699277 -184557306 + (CA)n Simple_repeat Simple_repeat 2 48 0 219 348 8 42 chr2 68699279 68699397 -184557186 - MIR3 SINE MIR -84 124 11 196 197 279 0 chr2 68700282 68700343 -184556240 - MER5A DNA MER1_type -4 185 108 510 230 133 7 chr2 68700636 68700771 -184555812 + MER5A DNA MER1_type 1 152 -37 601 294 63 38 chr2 68700844 68701238 -184555345 - L1ME4a LINE L1 -70 6051 5648 367 205 0 72 chr2 68702951 68703034 -184553549 + MER81 DNA DNA 1 77 -37 2263 71 3 27 chr2 68703369 68703664 -184552919 - AluY SINE Alu -23 288 1 374 314 75 53 chr2 68705053 68705429 -184551154 - L2 LINE L2 -434 2880 2497 1247 252 86 25 chr2 68705733 68706228 -184550355 - MLT1L LTR MaLR 0 615 16 23 0 0 0 chr2 68706367 68706390 -184550193 + AT_rich Low_complexity Low_complexity 1 23 0 338 175 50 12 chr2 68706461 68706541 -184550042 - MIR SINE MIR -119 143 61 2319 200 58 69 chr2 68706566 68707365 -184549218 - L1MC5 LINE L1 -44 7917 7128 3215 194 30 30 chr2 68708332 68708965 -184547618 + MER82 DNA MER2_type 3 635 -18 274 240 0 0 chr2 68710529 68710579 -184546004 + MER82 DNA MER2_type 516 565 -88 288 0 0 0 chr2 68710628 68710660 -184545923 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 1214 85 11 0 chr2 68710908 68711084 -184545499 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 2088 138 3 0 chr2 68711084 68711389 -184545194 - AluSx SINE Alu -5 307 2 1072 209 32 18 chr2 68712716 68712936 -184543647 - MER58A DNA MER1_type 0 224 2 2555 216 18 10 chr2 68713429 68713930 -184542653 - MLT1D LTR MaLR 0 505 1 207 319 149 43 chr2 68714091 68714232 -184542351 + MIR3 SINE MIR 3 158 -50 1399 148 26 4 chr2 68714539 68714768 -184541815 - L1MB3 LINE L1 -8 6175 5942 548 294 98 36 chr2 68714811 68715199 -184541384 + L1ME4a LINE L1 5643 6054 -67 6364 32 0 35 chr2 68715770 68716516 -184540067 - L1PA5 LINE L1 -1 6153 5434 22 0 0 0 chr2 68717064 68717086 -184539497 + AT_rich Low_complexity Low_complexity 1 22 0 191 361 0 19 chr2 68717795 68717903 -184538680 - MER5B DNA MER1_type -50 128 23 1493 157 82 4 chr2 68717947 68718227 -184538356 - MSTA LTR MaLR -5 423 122 1356 122 13 15 chr2 68718227 68718529 -184538054 + THE1C LTR MaLR 1 375 0 859 166 35 0 chr2 68718529 68718654 -184537929 - MSTA LTR MaLR -298 130 1 10406 150 23 16 chr2 68718654 68718996 -184537587 - MSTA-int LTR MaLR 0 1651 1313 2089 147 0 6 chr2 68718996 68719310 -184537273 - AluSx SINE Alu 0 312 1 10406 150 23 16 chr2 68719310 68720606 -184535977 - MSTA-int LTR MaLR -338 1313 1 2618 151 31 7 chr2 68720606 68721024 -184535559 - MSTA LTR MaLR 0 428 1 483 326 134 22 chr2 68721514 68721852 -184534731 + L3 LINE CR1 466 857 -720 234 91 0 0 chr2 68721852 68721885 -184534698 + (CCAA)n Simple_repeat Simple_repeat 4 36 0 483 326 134 22 chr2 68721885 68721948 -184534635 + L3 LINE CR1 857 912 -665 384 233 0 95 chr2 68721967 68722028 -184534555 - L2 LINE L2 0 3313 3267 1064 173 138 24 chr2 68722028 68722317 -184534266 + MER33 DNA MER1_type 2 323 -1 384 233 0 95 chr2 68722317 68722371 -184534212 - L2 LINE L2 -46 3267 3209 630 271 182 28 chr2 68722372 68723027 -184533556 - L2 LINE L2 -1 3312 2463 262 250 56 0 chr2 68723300 68723372 -184533211 + L3 LINE CR1 1397 1472 -105 366 297 135 36 chr2 68723877 68724069 -184532514 + MIR SINE MIR 4 214 -48 1909 71 38 127 chr2 68724073 68724413 -184532170 + L1MA2 LINE L1 5994 6303 -1 487 220 27 60 chr2 68724533 68724683 -184531900 - MIR3 SINE MIR -11 197 53 1076 170 100 5 chr2 68724819 68725019 -184531564 + MER20 DNA MER1_type 1 219 0 421 322 55 0 chr2 68725578 68725761 -184530822 - L1ME LINE L1 -412 5709 5517 1260 277 77 7 chr2 68726553 68726983 -184529600 + L1ME LINE L1 5326 5785 -336 297 179 18 18 chr2 68727052 68727108 -184529475 + MER5A DNA MER1_type 128 183 -6 239 314 12 12 chr2 68727211 68727297 -184529286 + MER5B DNA MER1_type 91 176 -2 490 209 9 17 chr2 68727695 68727810 -184528773 - LTR33 LTR ERVL 0 521 408 2321 224 20 15 chr2 68727942 68728483 -184528100 + MER74A LTR ERVL 1 544 -14 538 238 33 7 chr2 68728550 68728701 -184527882 - LTR33 LTR ERVL -341 180 26 180 0 0 0 chr2 68729417 68729437 -184527146 + (GGGTG)n Simple_repeat Simple_repeat 2 21 0 1634 165 4 11 chr2 68729437 68729703 -184526880 - AluJb SINE Alu -40 272 9 234 91 0 0 chr2 68731109 68731142 -184525441 + (CATA)n Simple_repeat Simple_repeat 4 36 0 236 180 20 0 chr2 68731985 68732035 -184524548 - L1MC4 LINE L1 -1343 6699 6649 5430 47 6 23 chr2 68732141 68732801 -184523782 - L1PA7 LINE L1 -1 6153 5505 247 295 39 13 chr2 68732888 68732966 -184523617 - MIR SINE MIR 0 262 183 1135 257 90 16 chr2 68733118 68733484 -184523099 - MLT1E LTR MaLR 0 593 201 582 161 109 212 chr2 68733658 68733795 -184522788 - MLT1E LTR MaLR -427 166 17 208 234 13 78 chr2 68733829 68733906 -184522677 - L2 LINE L2 -10 3303 3232 181 344 57 52 chr2 68733905 68734117 -184522466 + L2 LINE L2 2847 3059 -213 * 198 189 0 0 chr2 68734273 68734310 -184522273 + L2 LINE L2 3231 3267 -5 1831 162 3 20 chr2 68735749 68736052 -184520531 - AluJb SINE Alu -14 298 1 21 36 0 0 chr2 68736558 68736586 -184519997 + AT_rich Low_complexity Low_complexity 1 28 0 21 95 0 0 chr2 68736704 68736767 -184519816 + AT_rich Low_complexity Low_complexity 1 63 0 812 124 35 89 chr2 68736887 68737056 -184519527 + MER20 DNA MER1_type 2 161 -58 2023 176 44 74 chr2 68737089 68737590 -184518993 - MLT1D LTR MaLR -14 491 6 307 188 31 0 chr2 68737591 68737655 -184518928 + MER20 DNA MER1_type 154 219 0 246 32 0 0 chr2 68738398 68738429 -184518154 + (TG)n Simple_repeat Simple_repeat 1 31 0 1103 184 11 0 chr2 68739619 68739804 -184516779 - MER5A DNA MER1_type -2 187 1 213 295 39 0 chr2 68739829 68739907 -184516676 + MIR SINE MIR 49 129 -133 232 284 149 22 chr2 68739910 68739980 -184516603 + MER5A DNA MER1_type 37 97 -92 1996 128 14 0 chr2 68739980 68740269 -184516314 - AluSx SINE Alu -19 293 1 232 284 149 22 chr2 68740269 68740332 -184516251 + MER5A DNA MER1_type 97 187 -2 404 243 118 7 chr2 68740333 68740469 -184516114 + MIR SINE MIR 102 252 -10 1860 179 70 24 chr2 68740790 68741203 -184515380 - MSTB1 LTR MaLR 0 432 1 259 245 10 61 chr2 68741633 68741731 -184514852 + MIR SINE MIR 88 180 -82 297 241 58 0 chr2 68742948 68743035 -184513548 + LTR67 LTR ERVL 466 557 0 2573 113 31 6 chr2 68743496 68743851 -184512732 - THE1B LTR MaLR 0 364 1 186 133 0 0 chr2 68744177 68744207 -184512376 + (CA)n Simple_repeat Simple_repeat 2 31 0 289 270 68 0 chr2 68745208 68745282 -184511301 + L2 LINE L2 3226 3304 -9 232 227 0 0 chr2 68745284 68745328 -184511255 + GA-rich Low_complexity Low_complexity 2 45 0 222 366 94 10 chr2 68745630 68745832 -184510751 + L2 LINE L2 2155 2373 -941 337 292 11 0 chr2 68746201 68746290 -184510293 + MER81 DNA DNA 25 114 0 250 309 242 0 chr2 68747098 68747247 -184509336 + MIR SINE MIR 41 225 -37 1682 170 104 21 chr2 68747338 68747673 -184508910 - MLT1A2 LTR MaLR -5 369 7 22 0 0 0 chr2 68747728 68747750 -184508833 + AT_rich Low_complexity Low_complexity 1 22 0 450 263 167 40 chr2 68749936 68750164 -184506419 - MIR SINE MIR 0 262 6 2020 150 63 20 chr2 68750479 68750915 -184505668 + MER31A LTR ERV1 1 466 0 2100 141 0 0 chr2 68751811 68752108 -184504475 + AluJb SINE Alu 1 297 -15 2388 93 0 0 chr2 68752180 68752481 -184504102 - AluY SINE Alu -10 301 1 197 227 0 0 chr2 68753808 68753852 -184502731 - MIR SINE MIR -108 154 111 272 205 0 39 chr2 68755324 68755402 -184501181 - HsTC2 DNA Tc2 -2 1896 1822 575 260 109 70 chr2 68755425 68755589 -184500994 + L1MEd LINE L1 318 474 -5645 1915 187 23 0 chr2 68755589 68755942 -184500641 + MER46B DNA MER2_type 1 236 0 575 260 109 70 chr2 68755942 68756089 -184500494 + L1MEd LINE L1 474 641 -5478 329 242 21 21 chr2 68756095 68756190 -184500393 - HsTC2 DNA Tc2 -1797 101 7 24 32 0 0 chr2 68756224 68756255 -184500328 + AT_rich Low_complexity Low_complexity 1 31 0 976 115 15 0 chr2 68756333 68756463 -184500120 + FLAM_C SINE Alu 1 132 -11 854 306 86 21 chr2 68756628 68757101 -184499482 - MLT1K LTR MaLR -35 553 22 330 295 34 23 chr2 68757599 68757755 -184498828 + MIR SINE MIR 32 183 -66 540 0 0 0 chr2 68758039 68758099 -184498484 + (TTCC)n Simple_repeat Simple_repeat 1 60 0 1714 57 24 5 chr2 68758629 68758841 -184497742 - AluY SINE Alu -9 302 87 1706 76 18 0 chr2 68760173 68760398 -184496185 + L1PA10 LINE L1 5939 6167 -1 359 279 50 36 chr2 68760546 68760686 -184495897 + MER5B DNA MER1_type 36 177 -1 248 286 10 20 chr2 68760758 68760856 -184495727 - L2 LINE L2 -222 3091 2995 23 0 0 0 chr2 68762910 68762933 -184493650 + AT_rich Low_complexity Low_complexity 1 23 0 2251 137 70 28 chr2 68762966 68763471 -184493112 + MLT2A2 LTR ERVL 1 552 -2 767 171 165 18 chr2 68763471 68763641 -184492942 - AluJo SINE Alu -78 234 40 274 305 201 13 chr2 68764220 68764374 -184492209 - MIR3 SINE MIR -10 198 16 22 94 0 0 chr2 68764497 68764561 -184492022 + AT_rich Low_complexity Low_complexity 1 64 0 233 309 24 0 chr2 68764993 68765077 -184491506 - MIR3 SINE MIR -25 183 98 6199 85 25 2 chr2 68817333 68818251 -184438332 + L1MA2 LINE L1 5366 6304 0 445 288 48 22 chr2 68818314 68818755 -184437828 + L1ME LINE L1 1117 1611 -4699 584 266 22 9 chr2 68819119 68819348 -184437235 + L1ME LINE L1 2243 2474 -3655 518 294 129 40 chr2 68819388 68819738 -184436845 + L1ME LINE L1 3078 3458 -2671 592 307 55 21 chr2 68820576 68821088 -184435495 + L1ME LINE L1 3774 4302 -1827 228 237 34 0 chr2 68821111 68821170 -184435413 + (TA)n Simple_repeat Simple_repeat 1 61 0 505 274 67 23 chr2 68821421 68821764 -184434819 + L1ME LINE L1 4341 4698 -1431 314 322 66 0 chr2 68821787 68821970 -184434613 + L1ME LINE L1 4774 4968 -1161 848 269 12 27 chr2 68822259 68822510 -184434073 + MIR SINE MIR 17 262 0 873 314 53 26 chr2 68822518 68822548 -184434035 + L1ME LINE L1 5241 5269 -884 2468 67 0 0 chr2 68822548 68822846 -184433737 + AluY SINE Alu 1 298 -13 873 314 53 26 chr2 68822846 68823346 -184433237 + L1ME LINE L1 5269 5785 -368 1620 192 7 4 chr2 68823435 68823716 -184432867 + AluJb SINE Alu 1 282 -30 243 0 0 0 chr2 68823719 68823746 -184432837 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 482 31 16 0 chr2 68827541 68827605 -184428978 + (GA)n Simple_repeat Simple_repeat 2 66 0 240 314 123 48 chr2 68827743 68828052 -184428531 - L3 LINE CR1 -357 1220 889 875 162 66 35 chr2 68828094 68828292 -184428291 - L1PB4 LINE L1 0 6156 5953 2149 147 0 0 chr2 68828489 68828788 -184427795 + AluSx SINE Alu 1 299 -13 464 318 119 28 chr2 68828800 68829263 -184427320 - L1ME4a LINE L1 -54 6067 5563 224 254 183 0 chr2 68829458 68829529 -184427054 + L2 LINE L2 3229 3312 -1 467 200 30 30 chr2 68830170 68830270 -184426313 - MIR SINE MIR -18 244 145 544 276 189 33 chr2 68830276 68830726 -184425857 - LTR33 LTR ERVL 0 521 2 2640 285 178 22 chr2 68830741 68832221 -184424362 + L2 LINE L2 620 2331 -983 797 274 59 25 chr2 68832221 68832542 -184424041 + MLT1J2 LTR MaLR 1 332 -118 527 256 37 24 chr2 68832545 68832709 -184423874 + MLT1J2 LTR MaLR 285 450 0 250 261 31 0 chr2 68832816 68832881 -184423702 + L2 LINE L2 3198 3264 -8 1416 315 84 8 chr2 68832892 68833662 -184422921 + L2 LINE L2 2460 3291 -22 21 57 0 0 chr2 68833786 68833821 -184422762 + AT_rich Low_complexity Low_complexity 1 35 0 270 278 24 8 chr2 68833821 68833947 -184422636 - L1ME4a LINE L1 -12 6109 5982 245 125 0 21 chr2 68833957 68834005 -184422578 + (TTCC)n Simple_repeat Simple_repeat 2 48 0 2221 196 61 29 chr2 68834917 68835406 -184421177 + MLT1D LTR MaLR 1 505 0 383 260 32 8 chr2 68835450 68835573 -184421010 + MER117 DNA MER1_type 30 155 -42 183 80 0 0 chr2 68836643 68836668 -184419915 + (CAAAG)n Simple_repeat Simple_repeat 2 26 0 331 412 7 0 chr2 68836845 68836993 -184419590 - MIR3 SINE MIR -27 181 33 404 183 118 11 chr2 68837072 68837165 -184419418 + L2 LINE L2 3170 3272 0 1093 167 100 58 chr2 68837369 68837680 -184418903 + MER33 DNA MER1_type 1 324 0 530 354 41 64 chr2 68838215 68838605 -184417978 + L2 LINE L2 2837 3217 -55 180 0 0 0 chr2 68839359 68839379 -184417204 + (T)n Simple_repeat Simple_repeat 1 20 0 205 162 0 0 chr2 68840554 68840591 -184415992 + GA-rich Low_complexity Low_complexity 1 37 0 232 277 15 0 chr2 68840771 68840836 -184415747 + CT-rich Low_complexity Low_complexity 2 67 0 337 313 87 39 chr2 68843756 68843964 -184412619 + MIR SINE MIR 45 262 0 376 231 149 51 chr2 68844017 68844212 -184412371 + L2 LINE L2 3091 3304 -9 1435 145 45 3 chr2 68844562 68844852 -184411731 + MER33 DNA MER1_type 1 302 -22 273 310 39 54 chr2 68844904 68845033 -184411550 + MIR3 SINE MIR 15 141 -67 270 235 165 59 chr2 68846156 68846326 -184410257 + MIR SINE MIR 2 189 -73 187 284 167 10 chr2 68846735 68846837 -184409746 - L2 LINE L2 -16 3297 3180 490 240 8 8 chr2 68847060 68847185 -184409398 - MER5A DNA MER1_type -56 133 9 639 121 0 0 chr2 68848277 68848376 -184408207 + (GA)n Simple_repeat Simple_repeat 2 100 0 257 270 160 10 chr2 68850343 68850443 -184406140 + L2 LINE L2 3155 3269 -3 652 264 65 86 chr2 68851628 68852072 -184404511 - MLT1J LTR MaLR 0 446 1 2128 107 13 10 chr2 68852738 68853037 -184403546 + AluSx SINE Alu 1 300 -12 659 300 50 19 chr2 68853335 68853442 -184403141 + L2 LINE L2 3008 3110 -203 1941 132 33 15 chr2 68853442 68853775 -184402808 - L1MA8 LINE L1 0 6291 5953 659 300 50 19 chr2 68853775 68853927 -184402656 + L2 LINE L2 3110 3275 -38 249 57 0 0 chr2 68853996 68854031 -184402552 + (CA)n Simple_repeat Simple_repeat 1 35 0 2839 16 0 0 chr2 68854039 68854349 -184402234 - AluYa5 SINE Alu -1 310 1 276 171 118 34 chr2 68855090 68855181 -184401402 - MLT1J2 LTR MaLR 0 589 363 431 291 137 17 chr2 68855337 68855571 -184401012 - MLT1H LTR MaLR -287 262 1 198 0 0 0 chr2 68856293 68856315 -184400268 + (T)n Simple_repeat Simple_repeat 1 22 0 232 139 0 23 chr2 68857173 68857216 -184399367 - LTR51 LTR ERV1 -302 369 328 791 250 114 0 chr2 68857264 68857484 -184399099 - MIR SINE MIR -8 254 10 231 234 0 0 chr2 68858324 68858401 -184398182 + C-rich Low_complexity Low_complexity 5 81 0 344 241 13 0 chr2 68859565 68859644 -184396939 + MER116 DNA Mariner 1 80 0 215 333 0 0 chr2 68859678 68859753 -184396830 + MIR SINE MIR 184 258 -4 268 254 30 52 chr2 68860837 68860971 -184395612 - L2 LINE L2 -381 2933 2803 429 243 27 9 chr2 68861064 68861175 -184395408 + MIR SINE MIR 137 249 -13 22 0 0 0 chr2 68861178 68861200 -184395383 + AT_rich Low_complexity Low_complexity 1 22 0 727 298 54 27 chr2 68861203 68861572 -184395011 - L2 LINE L2 -556 2758 2380 225 281 125 8 chr2 68861711 68861839 -184394744 - MIR SINE MIR -71 191 49 2263 93 21 0 chr2 68862032 68862322 -184394261 - AluSx SINE Alu -16 296 1 2077 130 10 0 chr2 68862328 68862627 -184393956 - AluSx SINE Alu -10 302 1 3282 169 59 9 chr2 68863043 68863618 -184392965 + MER6A DNA MER2_type 2 605 0 724 274 60 53 chr2 68863755 68864021 -184392562 - MLT1K LTR MaLR -41 547 280 311 295 128 20 chr2 68864134 68864283 -184392300 - L2 LINE L2 -645 2669 2505 * 444 320 86 79 chr2 68864276 68864670 -184391913 - L2 LINE L2 -4 3268 2872 285 252 10 37 chr2 68865030 68865156 -184391427 - MLT1L LTR MaLR -1 614 463 1850 42 0 5 chr2 68865871 68866087 -184390496 + L1PA5 LINE L1 5938 6152 -2 685 246 39 39 chr2 68866360 68866567 -184390016 + MIR SINE MIR 47 253 -9 21 0 0 0 chr2 68868469 68868490 -184388093 + AT_rich Low_complexity Low_complexity 1 21 0 898 282 73 31 chr2 68868767 68869189 -184387394 - L2 LINE L2 0 3313 2874 284 167 0 19 chr2 68869500 68869554 -184387029 + MLT1F1 LTR MaLR 67 119 -448 1459 177 98 32 chr2 68869554 68869898 -184386685 + L1MD3 LINE L1 7407 7780 -215 1625 172 27 24 chr2 68869898 68870194 -184386389 + AluJb SINE Alu 1 297 -15 1459 177 98 32 chr2 68870194 68870227 -184386356 + L1MD3 LINE L1 7780 7809 -186 1981 150 0 10 chr2 68870271 68870571 -184386012 - AluJb SINE Alu -15 297 1 1976 154 0 0 chr2 68871247 68871545 -184385038 - AluJo SINE Alu -14 298 1 379 291 121 0 chr2 68872166 68872307 -184384276 + MIR SINE MIR 28 185 -77 1017 196 32 46 chr2 68872323 68872542 -184384041 - MER20 DNA MER1_type -3 216 1 372 305 43 37 chr2 68873292 68873479 -184383104 - MIR3 SINE MIR -5 203 16 430 185 185 0 chr2 68873579 68873698 -184382885 - L1MB3 LINE L1 -149 6034 5894 578 188 243 7 chr2 68874903 68875047 -184381536 - MER5B DNA MER1_type 0 178 1 767 278 5 5 chr2 68875140 68875334 -184381249 - MIR SINE MIR -6 256 63 21 0 0 0 chr2 68878229 68878250 -184378333 + AT_rich Low_complexity Low_complexity 1 21 0 339 279 12 37 chr2 68880096 68880257 -184376326 + CT-rich Low_complexity Low_complexity 4 160 0 214 305 0 0 chr2 68880650 68880709 -184375874 + (CA)n Simple_repeat Simple_repeat 2 60 0 376 221 53 0 chr2 68880719 68880814 -184375769 + MER94 DNA DNA 35 134 0 418 327 53 43 chr2 68880882 68881090 -184375493 + LTR67 LTR ERVL 9 218 -339 739 191 0 8 chr2 68882665 68882791 -184373792 + FLAM_C SINE Alu 2 126 -17 751 276 4 48 chr2 68882796 68883024 -184373559 - MIR SINE MIR -39 223 6 351 0 0 0 chr2 68883509 68883548 -184373035 + (TG)n Simple_repeat Simple_repeat 1 39 0 769 305 127 23 chr2 68884519 68884998 -184371585 + Tigger8 DNA MER2_type 41 569 -97 183 327 0 0 chr2 68885375 68885430 -184371153 - L2 LINE L2 -223 3049 2995 2346 88 3 0 chr2 68885516 68885810 -184370773 + AluSq SINE Alu 1 295 -18 540 272 79 40 chr2 68887812 68888040 -184368543 - MIR SINE MIR -6 256 20 1376 128 5 0 chr2 68888649 68888845 -184367738 - L1PA16 LINE L1 -2 6164 5968 770 271 76 38 chr2 68889591 68889882 -184366701 - L2 LINE L2 0 3313 3012 295 273 57 0 chr2 68889960 68890048 -184366535 - MIR SINE MIR -72 190 98 285 326 74 15 chr2 68890977 68891112 -184365471 - MER117 DNA MER1_type -50 147 5 319 390 42 26 chr2 68892337 68892527 -184364056 - L2 LINE L2 0 3272 3080 1010 318 113 11 chr2 68892901 68893363 -184363220 + L2 LINE L2 820 1328 -1986 635 326 56 4 chr2 68893519 68893752 -184362831 - L2 LINE L2 -245 3068 2824 441 264 13 26 chr2 68895200 68895355 -184361228 + MER103 DNA DNA 10 162 -4 612 73 18 9 chr2 68895567 68895676 -184360907 + (TCTA)n Simple_repeat Simple_repeat 2 111 0 271 260 20 80 chr2 68895711 68895811 -184360772 + MLT1G LTR MaLR 91 184 -406 2537 78 0 0 chr2 68895818 68896127 -184360456 - AluY SINE Alu -2 309 1 771 219 174 42 chr2 68896194 68896506 -184360077 + MLT1G LTR MaLR 154 572 -18 310 336 184 14 chr2 68897510 68897787 -184358796 + L3 LINE CR1 1142 1465 -112 373 274 18 0 chr2 68897879 68897992 -184358591 - LTR33A LTR ERVL -4 519 405 366 223 62 54 chr2 68898275 68898405 -184358178 - LTR50 LTR ERVL -645 150 20 643 365 24 88 chr2 68898437 68898822 -184357761 + L2 LINE L2 2575 2983 -289 3052 101 34 2 chr2 68898822 68899236 -184357347 + MSTA LTR MaLR 2 428 0 643 365 24 88 chr2 68899236 68899435 -184357148 + L2 LINE L2 2983 3112 -160 1975 124 25 0 chr2 68899435 68899736 -184356847 - AluSx SINE Alu 0 308 1 643 365 24 88 chr2 68899736 68899871 -184356712 + L2 LINE L2 3112 3254 -18 2188 215 94 16 chr2 68901612 68902123 -184354460 - MLT1F1 LTR MaLR -13 554 4 32287 113 14 54 chr2 68902489 68904981 -184351602 + L1PA7 LINE L1 12 2603 -3551 2238 82 7 17 chr2 68904981 68905273 -184351310 + AluY SINE Alu 1 289 -22 32287 113 14 54 chr2 68905273 68909196 -184347387 + L1PA7 LINE L1 2603 6152 -2 776 293 66 45 chr2 68909377 68909773 -184346810 + L2 LINE L2 2910 3313 0 542 281 10 45 chr2 68910625 68910824 -184345759 + LTR33 LTR ERVL 21 212 -309 544 298 13 0 chr2 68910864 68911022 -184345561 + LTR33 LTR ERVL 308 467 -54 1377 207 31 90 chr2 68911061 68911296 -184345287 + L1M2 LINE L1 1367 1568 -5281 2236 97 7 0 chr2 68911296 68911594 -184344989 - AluY SINE Alu -11 300 1 1377 207 31 90 chr2 68911594 68911779 -184344804 + L1M2 LINE L1 1568 1762 -5087 1591 216 15 18 chr2 68912306 68912567 -184344016 - L1MD3 LINE L1 -5 7990 7729 1953 213 37 3 chr2 68912567 68912920 -184343663 - MLT1A1 LTR MaLR 0 365 1 1591 216 15 18 chr2 68912920 68912991 -184343592 - L1MD3 LINE L1 -266 7729 7659 215 264 23 58 chr2 68914285 68914372 -184342211 - L2 LINE L2 -633 2681 2598 246 363 33 11 chr2 68914460 68914551 -184342032 + MIR SINE MIR 57 149 -113 1045 280 134 20 chr2 68914566 68915020 -184341563 + LTR33A LTR ERVL 1 506 -17 2045 139 3 3 chr2 68915749 68916058 -184340525 - AluSx SINE Alu -3 309 1 6532 260 102 17 chr2 68916074 68916918 -184339665 + L1MEc LINE L1 1576 2347 -4240 1759 184 0 7 chr2 68916918 68917227 -184339356 + AluJo SINE Alu 1 307 -5 6532 260 102 17 chr2 68917227 68920310 -184336273 + L1MEc LINE L1 2347 5844 -743 30 83 0 0 chr2 68921069 68921141 -184335442 + AT_rich Low_complexity Low_complexity 1 72 0 1182 260 33 15 chr2 68921478 68921809 -184334774 - MLT1J LTR MaLR -174 337 1 918 192 0 0 chr2 68922624 68922780 -184333803 - FRAM SINE Alu -22 154 1 1560 214 25 3 chr2 68924827 68925149 -184331434 - MER63 DNA MER1_type -1 1059 731 897 240 51 0 chr2 68925685 68925902 -184330681 - MIR SINE MIR -14 248 21 234 111 71 20 chr2 68928552 68928651 -184327932 + (TA)n Simple_repeat Simple_repeat 1 104 0 186 43 0 0 chr2 68928652 68928675 -184327908 + (TG)n Simple_repeat Simple_repeat 2 24 0 2419 74 3 0 chr2 68928699 68928996 -184327587 + AluSp SINE Alu 2 299 -14 282 227 80 0 chr2 68929492 68929580 -184327003 + MLT1L LTR MaLR 499 593 -22 813 188 58 0 chr2 68929723 68929884 -184326699 + MER58A DNA MER1_type 2 172 0 222 284 156 18 chr2 68931550 68931659 -184324924 - MIR SINE MIR -69 139 16 221 290 14 0 chr2 68933200 68933269 -184323314 - L2 LINE L2 -5 3267 3198 180 327 118 45 chr2 68933542 68933652 -184322931 + L2 LINE L2 3139 3256 -16 667 309 128 13 chr2 68934458 68934756 -184321827 + MLT1K LTR MaLR 4 335 -253 259 319 165 0 chr2 68935007 68935098 -184321485 + MIR SINE MIR 35 140 -122 460 270 24 8 chr2 68935124 68935250 -184321333 - LTR67 LTR ERVL 0 557 430 1531 195 34 17 chr2 68935444 68935736 -184320847 - AluJb SINE Alu -15 297 1 275 286 14 0 chr2 68936264 68936334 -184320249 + L2 LINE L2 3240 3310 -3 21 0 0 0 chr2 68936964 68936985 -184319598 + AT_rich Low_complexity Low_complexity 1 21 0 44674 41 1 1 chr2 68936985 68943140 -184313443 - L1PA3 LINE L1 0 6155 1 277 198 23 23 chr2 68943224 68943310 -184313273 + (CATG)n Simple_repeat Simple_repeat 1 86 0 200 261 0 0 chr2 68943733 68943779 -184312804 + L2 LINE L2 3247 3292 -21 191 170 226 0 chr2 68944526 68944579 -184312004 + MIR3 SINE MIR 103 167 -41 256 221 158 11 chr2 68946722 68946817 -184309766 - MIR SINE MIR 0 262 154 251 380 18 9 chr2 68947216 68947329 -184309254 - MIR SINE MIR -118 144 31 1712 161 99 3 chr2 68950244 68950567 -184306016 + MER46B DNA MER2_type 1 229 -7 2324 113 0 0 chr2 68951626 68951935 -184304648 + AluY SINE Alu 1 309 -2 215 295 0 32 chr2 68953404 68953499 -184303084 + MIR SINE MIR 125 216 -46 1079 266 115 23 chr2 68953768 68954159 -184302424 + MLT1J2 LTR MaLR 3 429 -21 38 39 0 0 chr2 68955669 68955721 -184300862 + AT_rich Low_complexity Low_complexity 1 52 0 2492 226 87 48 chr2 68955917 68956922 -184299661 - LTR27 LTR ERV1 0 1755 3 202 322 56 11 chr2 68958121 68958211 -184298372 - MIR SINE MIR -112 150 57 1304 87 43 5 chr2 68959208 68959392 -184297191 + MER30 DNA MER1_type 1 191 -39 180 246 92 15 chr2 68959771 68959836 -184296747 + L2 LINE L2 3117 3186 -86 282 227 136 40 chr2 68960104 68960302 -184296281 + L2 LINE L2 2215 2431 -883 280 243 140 65 chr2 68960418 68960525 -184296058 - L2 LINE L2 0 3272 3158 196 324 27 36 chr2 68960621 68960732 -184295851 + L2 LINE L2 2828 2937 -335 259 309 29 0 chr2 68961599 68961667 -184294916 + L2 LINE L2 3177 3246 -26 197 33 33 0 chr2 68961667 68961697 -184294886 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 249 316 26 9 chr2 68961766 68961880 -184294703 + MER117 DNA MER1_type 2 117 -80 2911 6 0 6 chr2 68961889 68962207 -184294376 + AluYb8 SINE Alu 1 316 -2 374 251 78 46 chr2 68963512 68963672 -184292911 + MIR SINE MIR 36 194 -65 534 306 62 31 chr2 68965099 68965334 -184291249 + L1M4 LINE L1 2842 3092 -3054 2039 127 0 11 chr2 68965334 68965642 -184290941 + AluSx SINE Alu 1 305 0 534 306 62 31 chr2 68965642 68965725 -184290858 + L1M4 LINE L1 3092 3171 -2975 5619 338 65 29 chr2 68965751 68969248 -184287335 - ERVL LTR ERVL -381 5383 1758 414 335 6 36 chr2 68969314 68969440 -184287143 - ERVL LTR ERVL -3420 1576 1455 2066 178 8 24 chr2 68969440 68969811 -184286772 + MLT1A1 LTR MaLR 1 365 0 414 335 6 36 chr2 68969811 68969851 -184286732 - ERVL LTR ERVL -3541 1455 1415 1523 290 28 25 chr2 68969932 68970442 -184286141 - ERVL LTR ERVL -3708 1288 778 1875 312 21 19 chr2 68970550 68971181 -184285402 - ERVL LTR ERVL -4363 633 2 956 359 70 14 chr2 68971182 68971608 -184284975 - LTR16A LTR ERVL 0 450 1 2486 84 3 0 chr2 68971800 68972111 -184284472 + AluSp SINE Alu 1 312 -1 869 303 104 41 chr2 68972580 68973336 -184283247 + L1ME4a LINE L1 5269 6072 -49 248 122 24 0 chr2 68973353 68973394 -184283189 - MER41A LTR ERV1 -113 441 400 223 316 143 30 chr2 68974156 68974289 -184282294 + L3 LINE CR1 166 313 -1264 2309 101 7 0 chr2 68974310 68974607 -184281976 + AluSc SINE Alu 1 299 -10 180 353 0 44 chr2 68975147 68975215 -184281368 - L2 LINE L2 -5 3267 3203 715 252 117 65 chr2 68975216 68975541 -184281042 - L2 LINE L2 -2 3311 2970 329 328 45 62 chr2 68975532 68975855 -184280728 - L2 LINE L2 -233 3039 2715 * 44816 40 1 2 chr2 68975858 68982011 -184274572 - L1PA4 LINE L1 -4 6151 3 251 161 18 0 chr2 68983594 68983650 -184272933 + GA-rich Low_complexity Low_complexity 1 57 0 21 36 0 0 chr2 68983688 68983716 -184272867 + AT_rich Low_complexity Low_complexity 1 28 0 671 237 46 6 chr2 68984911 68985084 -184271499 - MER104 DNA MER2_type 0 180 1 2340 96 7 0 chr2 68985628 68985929 -184270654 + AluSq SINE Alu 1 303 -10 445 280 70 6 chr2 68986160 68986317 -184270266 - MER117 DNA MER1_type -30 167 1 273 328 101 26 chr2 68986583 68986772 -184269811 + L3b LINE CR1 1113 1315 -268 386 213 37 146 chr2 68987035 68987199 -184269384 - MIR SINE MIR -111 151 6 263 290 28 102 chr2 68988316 68988392 -184268191 + MER5A DNA MER1_type 2 82 -107 1596 146 0 16 chr2 68988392 68988683 -184267900 + AluSx SINE Alu 43 329 0 263 290 28 102 chr2 68988683 68988781 -184267802 + MER5A DNA MER1_type 82 164 -25 1788 117 0 23 chr2 68989337 68989594 -184266989 - AluSg SINE Alu -6 304 54 23 0 0 0 chr2 68989888 68989911 -184266672 + AT_rich Low_complexity Low_complexity 1 23 0 420 185 87 11 chr2 68990108 68990200 -184266383 - MIR SINE MIR -86 122 24 1832 120 102 0 chr2 68990663 68990947 -184265636 + AluSq SINE Alu 1 313 0 1888 150 197 11 chr2 68990995 68991356 -184265227 - MSTA LTR MaLR 0 428 1 315 0 0 0 chr2 68992564 68992599 -184263984 + (TG)n Simple_repeat Simple_repeat 2 36 0 395 241 340 25 chr2 68993192 68993354 -184263229 + MIR SINE MIR 29 241 -21 810 279 72 35 chr2 68994165 68994567 -184262016 - HAL1 LINE L1 -1 2506 2090 1260 47 0 13 chr2 68994567 68994716 -184261867 - L1PA8 LINE L1 -7 6165 6019 1136 294 26 46 chr2 68994754 68995169 -184261414 - MLT1I LTR MaLR 0 409 3 1774 280 97 85 chr2 68995340 68995554 -184261029 - HAL1 LINE L1 -707 1800 1590 2635 146 57 0 chr2 68995554 68995957 -184260626 + MSTB LTR MaLR 1 426 0 1774 280 97 85 chr2 68995957 68997520 -184259063 - HAL1 LINE L1 -917 1590 1 535 349 18 23 chr2 68997730 68997948 -184258635 + MIR SINE MIR 46 262 0 977 241 9 14 chr2 68998241 68998461 -184258122 - MER58A DNA MER1_type -5 219 1 1018 236 46 116 chr2 68999379 68999807 -184256776 + L1MC5 LINE L1 6542 6925 -1036 227 56 56 0 chr2 68999807 68999843 -184256740 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 1018 236 46 116 chr2 68999843 69000028 -184256555 + L1MC5 LINE L1 6925 7121 -840 385 256 34 0 chr2 69000028 69000145 -184256438 + L1MC5 LINE L1 7808 7928 -33 1768 144 206 9 chr2 69000756 69001082 -184255501 + MLT1B LTR MaLR 1 390 0 1131 148 11 11 chr2 69001519 69001701 -184254882 - MER2 DNA MER2_type 0 345 164 2572 113 6 6 chr2 69001701 69002055 -184254528 - THE1B LTR MaLR 0 364 11 1049 180 6 0 chr2 69002054 69002226 -184254357 - MER2 DNA MER2_type -171 174 2 * 347 261 17 67 chr2 69002680 69002799 -184253784 - L2 LINE L2 -15 3298 3186 26 0 0 0 chr2 69002821 69002847 -184253736 + AT_rich Low_complexity Low_complexity 1 26 0 1713 213 26 66 chr2 69002991 69003447 -184253136 + MER31B LTR ERV1 1 438 -28 252 0 0 0 chr2 69005310 69005338 -184251245 + (TG)n Simple_repeat Simple_repeat 2 29 0 485 241 9 18 chr2 69005416 69005528 -184251055 + L2 LINE L2 3202 3312 -1 188 0 0 69 chr2 69005639 69005668 -184250915 + (CAAAAA)n Simple_repeat Simple_repeat 3 29 0 380 256 37 14 chr2 69005761 69005901 -184250682 + MIR SINE MIR 20 155 -65 282 221 30 30 chr2 69005967 69006098 -184250485 + (TTA)n Simple_repeat Simple_repeat 3 133 0 311 351 18 9 chr2 69006193 69006307 -184250276 + MIR SINE MIR 39 153 -109 413 331 41 28 chr2 69006455 69006600 -184249983 - L2 LINE L2 -1 3271 3125 499 368 163 15 chr2 69007107 69008190 -184248393 + L2 LINE L2 239 1482 -1832 562 316 71 75 chr2 69008299 69008765 -184247818 + L2 LINE L2 2809 3272 0 245 189 81 27 chr2 69009189 69009263 -184247320 - L1MEc LINE L1 -5060 1250 1173 396 270 81 0 chr2 69009281 69009392 -184247191 - MER58B DNA MER1_type 0 341 222 * 598 79 0 144 chr2 69009390 69009529 -184247054 + LTR9B LTR ERV1 447 565 -79 986 186 40 0 chr2 69009628 69009805 -184246778 - MER58B DNA MER1_type -155 186 3 358 278 22 59 chr2 69009808 69010078 -184246505 - L1MEc LINE L1 -5003 1116 857 1817 153 47 0 chr2 69010111 69010385 -184246198 - AluJo SINE Alu -25 287 1 270 106 0 0 chr2 69010619 69010666 -184245917 + (CA)n Simple_repeat Simple_repeat 1 47 0 805 166 12 0 chr2 69013305 69013474 -184243109 + GA-rich Low_complexity Low_complexity 2 172 0 921 184 25 0 chr2 69013829 69013992 -184242591 + MER5A DNA MER1_type 23 189 0 180 237 0 0 chr2 69015170 69015208 -184241375 - MIR3 SINE MIR -45 163 126 2597 177 92 23 chr2 69015316 69015797 -184240786 - MLT2B2 LTR ERVL 0 515 2 322 271 101 16 chr2 69015824 69015953 -184240630 - MIR SINE MIR -73 189 50 305 156 0 16 chr2 69016758 69016822 -184239761 + CT-rich Low_complexity Low_complexity 4 66 0 450 325 113 22 chr2 69017599 69017910 -184238673 + MER102b DNA MER1_type 2 340 -1 719 301 94 62 chr2 69019156 69019604 -184236979 - L2 LINE L2 0 3313 2852 374 202 47 98 chr2 69019720 69019865 -184236718 + L1ME1 LINE L1 5757 5874 -296 1891 118 28 65 chr2 69019865 69020186 -184236397 + AluSx SINE Alu 1 309 -3 374 202 47 98 chr2 69020186 69020253 -184236330 + L1ME1 LINE L1 5874 5943 -227 834 124 5 38 chr2 69020464 69020650 -184235933 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 578 170 46 0 chr2 69020653 69020806 -184235777 + CT-rich Low_complexity Low_complexity 3 162 0 186 103 0 0 chr2 69022152 69022181 -184234402 + (CAAT)n Simple_repeat Simple_repeat 1 29 0 2295 170 46 50 chr2 69022371 69022830 -184233753 - MSTB2 LTR MaLR 0 457 1 243 336 29 19 chr2 69023226 69023330 -184233253 + MER5B DNA MER1_type 46 150 -28 356 260 27 20 chr2 69024511 69024648 -184231935 - MLT1J LTR MaLR -2 509 406 751 205 42 6 chr2 69025011 69025177 -184231406 + MER5B DNA MER1_type 7 178 0 188 219 0 24 chr2 69025200 69025241 -184231342 - MER5A DNA MER1_type -124 65 26 243 0 0 0 chr2 69025281 69025308 -184231275 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 304 302 22 59 chr2 69025434 69025635 -184230948 - MIR SINE MIR -50 212 16 554 297 83 26 chr2 69025734 69025963 -184230620 - MIR SINE MIR -4 258 17 616 311 33 11 chr2 69025964 69026144 -184230439 + MER91A DNA MER1_type 1 184 -12 321 284 14 0 chr2 69026717 69026791 -184229792 + L2 LINE L2 3235 3309 -4 1019 313 62 48 chr2 69026971 69027795 -184228788 + L1MEd LINE L1 16 850 -5269 912 279 17 8 chr2 69028167 69028404 -184228179 + MIR SINE MIR 3 241 -21 227 316 66 0 chr2 69028542 69028618 -184227965 - MIR3 SINE MIR -25 183 103 348 64 0 0 chr2 69032087 69032134 -184224449 + (TG)n Simple_repeat Simple_repeat 2 48 0 293 259 175 30 chr2 69032688 69032854 -184223729 + MER20B DNA MER1_type 3 192 -591 1235 220 158 36 chr2 69033061 69033511 -184223072 - MLT1D LTR MaLR 0 505 1 382 359 52 4 chr2 69033598 69033829 -184222754 - L2 LINE L2 -676 2638 2397 322 263 105 0 chr2 69034351 69034446 -184222137 + MIR SINE MIR 27 131 -77 633 250 138 0 chr2 69035671 69035831 -184220752 + MER5A DNA MER1_type 5 186 -3 1371 119 95 0 chr2 69035842 69036052 -184220531 - MER30 DNA MER1_type 0 230 1 423 294 94 25 chr2 69038338 69038539 -184218044 - MIR SINE MIR 0 262 48 369 178 55 0 chr2 69038791 69038864 -184217719 + MIR SINE MIR 183 259 -3 350 353 16 0 chr2 69038997 69039119 -184217464 + L2 LINE L2 3190 3313 0 233 288 76 0 chr2 69040180 69040246 -184216337 - MIR SINE MIR -179 83 13 206 118 0 0 chr2 69040366 69040400 -184216183 + (A)n Simple_repeat Simple_repeat 1 34 0 426 280 53 33 chr2 69041185 69041335 -184215248 + MIR SINE MIR 66 218 -44 2255 156 83 5 chr2 69041367 69041764 -184214819 + MSTA LTR MaLR 1 428 0 685 168 48 0 chr2 69041836 69041961 -184214622 - MLT1C LTR MaLR 0 467 337 638 220 0 0 chr2 69042004 69042113 -184214470 - MLT1C LTR MaLR -138 329 221 22 0 0 0 chr2 69042135 69042157 -184214426 + AT_rich Low_complexity Low_complexity 1 22 0 1071 60 8 0 chr2 69042161 69042294 -184214289 - L1PB1 LINE L1 0 6151 6018 1014 18 0 0 chr2 69042314 69042427 -184214156 - AluYb8 SINE Alu -205 113 1 5250 139 21 12 chr2 69042427 69043757 -184212826 - L1PB1 LINE L1 -118 6033 4694 1079 175 52 22 chr2 69043757 69043986 -184212597 - MLT1C LTR MaLR -231 236 1 340 255 38 19 chr2 69044444 69044550 -184212033 - MIR SINE MIR -59 203 96 188 83 0 28 chr2 69046601 69046637 -184209946 + (TTAAA)n Simple_repeat Simple_repeat 1 35 0 288 219 0 16 chr2 69046651 69046715 -184209868 - MER3 DNA MER1_type -146 63 1 833 222 34 6 chr2 69046992 69047168 -184209415 - MER58A DNA MER1_type 0 224 44 31 26 0 0 chr2 69047498 69047536 -184209047 + AT_rich Low_complexity Low_complexity 1 38 0 1763 153 0 24 chr2 69047543 69047831 -184208752 - AluSx SINE Alu -31 281 1 21 0 0 0 chr2 69048162 69048183 -184208400 + AT_rich Low_complexity Low_complexity 1 21 0 1871 167 0 7 chr2 69048336 69048635 -184207948 + AluJb SINE Alu 2 298 -14 441 95 0 0 chr2 69048647 69048710 -184207873 + (TG)n Simple_repeat Simple_repeat 2 64 0 3805 71 4 0 chr2 69048747 69049209 -184207374 - L1PA7 LINE L1 0 6154 5691 1135 194 12 147 chr2 69049209 69049549 -184207034 + MER21B LTR ERV1 42 335 -528 1279 212 93 25 chr2 69049574 69049895 -184206688 + MER2 DNA MER2_type 2 344 -1 1710 217 93 21 chr2 69049901 69050320 -184206263 + MER21B LTR ERV1 363 811 -52 1835 148 100 28 chr2 69052335 69052749 -184203834 - MLT2D LTR ERVL 0 554 1 264 167 0 0 chr2 69052878 69052926 -184203657 + (CA)n Simple_repeat Simple_repeat 2 49 0 1891 166 7 3 chr2 69053423 69053731 -184202852 + AluJb SINE Alu 1 309 -3 206 227 13 80 chr2 69054010 69054085 -184202498 + MIR3 SINE MIR 133 202 -6 2205 124 0 9 chr2 69054234 69054549 -184202034 + AluSx SINE Alu 1 312 0 1011 144 32 27 chr2 69054597 69054785 -184201798 + MER53 DNA DNA 1 189 0 270 305 29 0 chr2 69055088 69055193 -184201390 - MER102b DNA MER1_type -1 340 233 232 318 0 0 chr2 69055213 69055276 -184201307 - MER102b DNA MER1_type -278 63 1 454 202 115 0 chr2 69055405 69055509 -184201074 + L2 LINE L2 3198 3313 0 271 304 0 0 chr2 69055671 69055740 -184200843 + MER102b DNA MER1_type 11 79 -262 795 269 8 51 chr2 69055896 69056149 -184200434 + MIR SINE MIR 18 259 -3 1745 206 22 38 chr2 69056308 69056677 -184199906 - MLT1A1 LTR MaLR -2 363 1 386 261 0 11 chr2 69056696 69056784 -184199799 + L2 LINE L2 3227 3313 0 1834 221 54 67 chr2 69056954 69057493 -184199090 + MLT1F LTR MaLR 11 542 0 1552 195 7 17 chr2 69057815 69058113 -184198470 + AluJo SINE Alu 1 295 -17 405 300 184 11 chr2 69058306 69058573 -184198010 + L3 LINE CR1 1051 1363 -214 334 338 45 40 chr2 69058724 69058922 -184197661 + MIR SINE MIR 20 218 -44 1336 159 0 76 chr2 69058935 69059211 -184197372 + MLT1B LTR MaLR 136 390 0 2943 272 134 30 chr2 69059551 69060042 -184196541 - HAL1 LINE L1 -1048 1459 1020 321 100 0 0 chr2 69060042 69060092 -184196491 + (TG)n Simple_repeat Simple_repeat 2 51 0 2943 272 134 30 chr2 69060092 69060908 -184195675 - HAL1 LINE L1 -1487 1020 16 417 20 0 0 chr2 69061120 69061170 -184195413 + (CA)n Simple_repeat Simple_repeat 2 51 0 212 315 101 27 chr2 69061309 69061458 -184195125 + MIR SINE MIR 49 208 -54 204 300 0 43 chr2 69061614 69061684 -184194899 + L2 LINE L2 3246 3312 -1 321 214 258 11 chr2 69062630 69062719 -184193864 - MER5A DNA MER1_type 0 189 79 1062 139 13 0 chr2 69062726 69062877 -184193706 - FRAM SINE Alu -19 157 5 239 283 17 0 chr2 69062886 69062946 -184193637 - MER5A DNA MER1_type -115 74 14 1837 155 17 3 chr2 69062959 69063249 -184193334 - AluJb SINE Alu -15 297 4 448 227 281 0 chr2 69063597 69063725 -184192858 - MER5B DNA MER1_type -14 164 1 491 314 37 0 chr2 69063972 69064160 -184192423 + HsTC2 DNA Tc2 717 911 -987 27 62 0 0 chr2 69064934 69064982 -184191601 + AT_rich Low_complexity Low_complexity 1 48 0 2854 117 30 37 chr2 69066318 69066413 -184190170 - Tigger2a DNA MER2_type -2274 434 340 2582 137 80 2 chr2 69066413 69066814 -184189769 - MSTB1 LTR MaLR 0 432 1 2854 117 30 37 chr2 69066814 69067155 -184189428 - Tigger2a DNA MER2_type -2368 340 1 245 193 0 18 chr2 69067164 69067221 -184189362 + L2 LINE L2 1618 1673 -1641 1608 308 101 28 chr2 69067257 69068130 -184188453 + L2 LINE L2 1878 2814 -500 2106 111 18 0 chr2 69068130 69068436 -184188147 - AluSq SINE Alu 0 311 1 283 226 0 0 chr2 69068530 69068592 -184187991 - L1M4c LINE L1 -3884 2500 2439 2516 216 55 28 chr2 69068943 69069118 -184187465 - L1ME1 LINE L1 -191 5958 5789 1859 154 88 23 chr2 69069118 69069461 -184187122 + MLT1A1 LTR MaLR 1 365 0 2516 216 55 28 chr2 69069461 69069901 -184186682 - L1ME1 LINE L1 -360 5789 5326 1082 221 9 44 chr2 69069903 69069994 -184186589 - L1ME1 LINE L1 -3169 2960 2867 2130 116 0 0 chr2 69069994 69070319 -184186264 - AluSx SINE Alu 0 325 1 1082 221 9 44 chr2 69070319 69070542 -184186041 - L1ME1 LINE L1 -3262 2867 2656 1964 180 66 0 chr2 69070605 69070982 -184185601 + L1MB8 LINE L1 5450 5851 -333 1139 195 4 32 chr2 69070984 69071235 -184185348 + L1MB8 LINE L1 5929 6172 -6 292 266 116 49 chr2 69071311 69071517 -184185066 - L1MC4 LINE L1 -91 7746 7501 204 67 0 0 chr2 69071517 69071547 -184185036 + (TG)n Simple_repeat Simple_repeat 1 30 0 865 290 77 29 chr2 69071611 69072053 -184184530 - L1ME1 LINE L1 -5158 961 499 445 319 49 10 chr2 69072251 69072455 -184184128 - L1ME1 LINE L1 -5902 217 6 862 264 185 26 chr2 69072464 69072880 -184183703 + L2 LINE L2 2825 3306 -7 195 162 0 0 chr2 69073043 69073080 -184183503 + (TG)n Simple_repeat Simple_repeat 2 38 0 195 189 0 0 chr2 69074671 69074708 -184181875 - MIR3 SINE MIR -20 188 152 189 189 0 54 chr2 69074683 69074720 -184181863 - L3 LINE CR1 -28 1549 1515 * 442 129 20 189 chr2 69074986 69075065 -184181518 - MSTC LTR MaLR -338 90 62 2687 51 0 0 chr2 69075065 69075376 -184181207 - AluY SINE Alu 0 311 1 442 129 20 189 chr2 69075376 69075430 -184181153 - MSTC LTR MaLR -366 62 1 249 180 0 0 chr2 69075639 69075689 -184180894 + GA-rich Low_complexity Low_complexity 2 51 0 1235 107 45 0 chr2 69077981 69078158 -184178425 - AluSq SINE Alu 0 313 129 2590 129 45 10 chr2 69078435 69078831 -184177752 - MSTC LTR MaLR -18 410 1 29 47 0 0 chr2 69078914 69078957 -184177626 + AT_rich Low_complexity Low_complexity 1 43 0 363 211 0 0 chr2 69079017 69079107 -184177476 + GA-rich Low_complexity Low_complexity 2 91 0 22 0 0 0 chr2 69080250 69080272 -184176311 + AT_rich Low_complexity Low_complexity 1 22 0 347 296 214 0 chr2 69080462 69080668 -184175915 - MIR SINE MIR -12 250 1 2205 131 0 0 chr2 69080903 69081209 -184175374 - AluSx SINE Alu -6 306 1 308 222 75 84 chr2 69081210 69081322 -184175261 - MIR3 SINE MIR -30 178 68 234 0 0 0 chr2 69083066 69083092 -184173491 + (TG)n Simple_repeat Simple_repeat 2 27 0 247 296 99 26 chr2 69085702 69085854 -184170729 - LTR16C LTR ERVL -2 489 327 1016 92 13 0 chr2 69087495 69087648 -184168935 + (TTTC)n Simple_repeat Simple_repeat 4 158 0 1965 135 0 7 chr2 69087648 69087930 -184168653 - AluSx SINE Alu -32 280 1 200 302 167 10 chr2 69088269 69088365 -184168218 - MIR SINE MIR -55 153 43 352 291 0 27 chr2 69088729 69088839 -184167744 - MIR3 SINE MIR -9 199 93 248 202 83 48 chr2 69089964 69090048 -184166535 + MIR SINE MIR 122 208 -54 207 0 0 0 chr2 69090294 69090317 -184166266 + (CAAAAA)n Simple_repeat Simple_repeat 3 25 0 2309 107 3 0 chr2 69090323 69090632 -184165951 + AluSp SINE Alu 1 310 -3 316 256 96 32 chr2 69091013 69091138 -184165445 - L2 LINE L2 -5 3308 3176 28 0 0 0 chr2 69091300 69091328 -184165255 + AT_rich Low_complexity Low_complexity 1 28 0 2154 102 0 36 chr2 69091331 69091634 -184164949 + AluSx SINE Alu 2 293 -19 314 289 11 0 chr2 69092304 69092394 -184164189 + GA-rich Low_complexity Low_complexity 2 92 0 198 305 73 0 chr2 69092841 69092923 -184163660 + MIR SINE MIR 64 151 -111 315 232 0 0 chr2 69094054 69094136 -184162447 + (TAGA)n Simple_repeat Simple_repeat 1 82 0 761 216 0 0 chr2 69094208 69094333 -184162250 - FLAM_A SINE Alu -8 125 1 1973 115 3 94 chr2 69094985 69095325 -184161258 - AluSp SINE Alu -4 309 1 2262 139 29 5 chr2 69095328 69095710 -184160873 - L1MA4 LINE L1 -17 6283 5893 349 248 83 18 chr2 69095737 69095846 -184160737 + MIR3 SINE MIR 2 117 -91 214 97 0 0 chr2 69095910 69095941 -184160642 + MER5B DNA MER1_type 19 49 -129 1192 162 0 0 chr2 69098507 69098705 -184157878 + L1PB1 LINE L1 3 200 -6663 14948 146 57 17 chr2 69098737 69103907 -184152676 + L1PB1 LINE L1 647 5609 -1258 4772 39 2 0 chr2 69103907 69104441 -184152142 + L1PA5 LINE L1 5618 6152 -2 14948 146 57 17 chr2 69104441 69104892 -184151691 + L1PB1 LINE L1 5609 6041 -826 342 0 0 0 chr2 69104892 69104930 -184151653 + (CA)n Simple_repeat Simple_repeat 2 39 0 14948 146 57 17 chr2 69104930 69105290 -184151293 + L1PB1 LINE L1 6041 6867 0 270 0 0 0 chr2 69105541 69105571 -184151012 + (CAAAA)n Simple_repeat Simple_repeat 3 32 0 389 254 121 52 chr2 69105879 69106052 -184150531 - MER5A DNA MER1_type -1 188 4 1095 172 10 26 chr2 69106063 69106255 -184150328 - MER5A DNA MER1_type 0 189 1 207 100 0 0 chr2 69106793 69106823 -184149760 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 211 233 17 50 chr2 69106832 69106892 -184149691 - L2 LINE L2 -15 3257 3200 1021 127 12 12 chr2 69107509 69107682 -184148901 + MER53 DNA DNA 5 177 -12 3466 53 14 1 chr2 69107877 69108596 -184147987 - L1P2 LINE L1 -487 5667 4941 234 0 0 0 chr2 69108725 69108751 -184147832 + (T)n Simple_repeat Simple_repeat 1 26 0 2729 171 56 34 chr2 69109334 69109838 -184146745 - MLT2B2 LTR ERVL 0 515 1 180 222 0 0 chr2 69109986 69110031 -184146552 - L2 LINE L2 0 3313 3269 2367 134 21 24 chr2 69110098 69110471 -184146112 - THE1C LTR MaLR -3 372 1 398 217 28 57 chr2 69112486 69112592 -184143991 - MIR SINE MIR -82 180 78 722 314 12 16 chr2 69112859 69113114 -184143469 - MIR SINE MIR -3 259 6 589 196 112 21 chr2 69113135 69113278 -184143305 - MER5A DNA MER1_type 0 189 34 341 322 0 35 chr2 69113313 69113456 -184143127 - MER5B DNA MER1_type -22 156 19 199 287 17 70 chr2 69113476 69113591 -184142992 + MIR SINE MIR 104 212 -50 1648 181 22 0 chr2 69113637 69113913 -184142670 + AluJo SINE Alu 11 292 -20 272 229 177 0 chr2 69114013 69114109 -184142474 + MIR SINE MIR 136 248 -14 189 107 0 0 chr2 69114466 69114494 -184142089 + (ATG)n Simple_repeat Simple_repeat 3 30 0 359 302 65 64 chr2 69114704 69115081 -184141502 - L1M4 LINE L1 -1525 4621 4235 21 82 0 0 chr2 69115089 69115138 -184141445 + AT_rich Low_complexity Low_complexity 1 49 0 35 24 0 0 chr2 69115729 69115771 -184140812 + AT_rich Low_complexity Low_complexity 1 42 0 227 149 45 104 chr2 69116561 69116628 -184139955 + MLT1J2 LTR MaLR 34 96 -354 * 777 266 165 35 chr2 69116588 69116994 -184139589 + LTR67 LTR ERVL 99 557 0 449 276 221 22 chr2 69117100 69117281 -184139302 - MIR SINE MIR -25 237 21 241 300 114 57 chr2 69117289 69117429 -184139154 - MIR SINE MIR -87 175 28 208 212 61 45 chr2 69117946 69118012 -184138571 + MIR3 SINE MIR 10 76 -132 1260 216 110 4 chr2 69118982 69119246 -184137337 + AluJo SINE Alu 2 293 -9 267 358 14 40 chr2 69119711 69119859 -184136724 - L2 LINE L2 0 3272 3129 440 239 51 8 chr2 69119890 69120007 -184136576 + L2 LINE L2 2932 3053 -219 463 317 16 44 chr2 69120135 69120318 -184136265 - LTR33 LTR ERVL -343 178 1 406 312 56 8 chr2 69120419 69120544 -184136039 - MER91A DNA MER1_type -65 131 1 2874 97 14 3 chr2 69121604 69121975 -184134608 + THE1C LTR MaLR 1 375 0 2096 116 7 3 chr2 69124733 69125025 -184131558 - AluSq SINE Alu -20 293 1 374 325 127 32 chr2 69125750 69126128 -184130455 + L2 LINE L2 2261 2674 -640 1255 266 76 3 chr2 69126145 69126514 -184130069 - LTR16A LTR ERVL 0 450 55 1995 160 3 6 chr2 69126518 69126830 -184129753 - AluJo SINE Alu -1 311 1 486 336 80 54 chr2 69126860 69127425 -184129158 + L2 LINE L2 2687 3272 0 202 368 0 11 chr2 69127426 69127513 -184129070 - MIR SINE MIR -57 151 66 408 273 55 16 chr2 69129158 69129286 -184127297 + MER94 DNA DNA 1 133 -1 8631 29 0 0 chr2 69129337 69131062 -184125521 - L1PA3 LINE L1 -2 6153 4426 5184 152 37 13 chr2 69132803 69133696 -184122887 - L1MC1 LINE L1 0 6333 5420 1664 247 44 13 chr2 69133717 69134101 -184122482 - MSTD LTR MaLR 0 396 1 315 341 0 48 chr2 69134582 69134708 -184121875 - MIR3 SINE MIR -78 130 11 301 283 65 82 chr2 69135001 69135189 -184121394 + MIR3 SINE MIR 2 191 -68 188 212 0 0 chr2 69135253 69135286 -184121297 + L2 LINE L2 3272 3304 -9 2431 166 66 13 chr2 69136523 69136992 -184119591 - L1MB3 LINE L1 -1 6182 5689 2245 103 6 16 chr2 69137005 69137317 -184119266 - AluSx SINE Alu -3 309 1 1747 205 22 25 chr2 69137428 69137794 -184118789 + MLT1A1 LTR MaLR 1 365 0 369 333 11 61 chr2 69137915 69138095 -184118488 + MER5B DNA MER1_type 7 177 -1 183 80 0 0 chr2 69139796 69139821 -184116762 + (A)n Simple_repeat Simple_repeat 1 25 0 379 153 12 12 chr2 69141197 69141282 -184115301 + CT-rich Low_complexity Low_complexity 2 86 0 189 107 0 0 chr2 69141337 69141365 -184115218 + (TG)n Simple_repeat Simple_repeat 2 29 0 506 146 11 11 chr2 69141953 69142042 -184114541 - MER53 DNA DNA -96 93 5 282 218 0 0 chr2 69142321 69142376 -184114207 + MER94 DNA DNA 64 118 -16 324 0 0 0 chr2 69143230 69143266 -184113317 + (T)n Simple_repeat Simple_repeat 1 36 0 28167 42 37 3 chr2 69143797 69147290 -184109293 - L1P LINE L1 -2533 3613 1 268 333 18 27 chr2 69148388 69148499 -184108084 + MIR SINE MIR 21 130 -132 733 198 102 30 chr2 69149503 69149670 -184106913 + MER5A DNA MER1_type 8 186 -3 224 355 66 53 chr2 69151672 69151824 -184104759 + L2 LINE L2 3117 3270 -2 2342 103 0 0 chr2 69153646 69153947 -184102636 - AluY SINE Alu -10 301 1 428 136 0 0 chr2 69154211 69154270 -184102313 - Alu SINE Alu -17 293 235 2516 84 0 0 chr2 69154679 69154990 -184101593 + AluY SINE Alu 1 311 0 2128 253 109 33 chr2 69155466 69156529 -184100054 + L2 LINE L2 2126 3278 -35 930 266 61 83 chr2 69156645 69157040 -184099543 - MLT1J2 LTR MaLR -13 437 52 1960 235 58 35 chr2 69157268 69157919 -184098664 - L1M4 LINE L1 -2153 3993 3328 454 232 29 58 chr2 69157933 69158071 -184098512 + L1ME LINE L1 5484 5617 -504 240 327 10 10 chr2 69158211 69158315 -184098268 + L2 LINE L2 1302 1405 -1909 1667 175 58 19 chr2 69158316 69158765 -184097818 + MLT2B1 LTR ERVL 1 515 0 1939 291 152 28 chr2 69158772 69159863 -184096720 + L2 LINE L2 1407 2633 -681 21 71 0 0 chr2 69160034 69160076 -184096507 + AT_rich Low_complexity Low_complexity 1 42 0 21 36 0 0 chr2 69160291 69160319 -184096264 + AT_rich Low_complexity Low_complexity 1 28 0 6046 249 62 33 chr2 69160322 69163753 -184092830 - L1MEc LINE L1 -1759 4456 1128 426 69 0 0 chr2 69163753 69163811 -184092772 + (TG)n Simple_repeat Simple_repeat 2 59 0 1950 151 0 0 chr2 69163812 69164097 -184092486 - AluJb SINE Alu -27 285 1 6046 249 62 33 chr2 69164097 69164216 -184092367 - L1MEc LINE L1 -5087 1128 1014 2165 62 0 4 chr2 69164216 69164474 -184092109 - AluY SINE Alu -14 297 41 6046 249 62 33 chr2 69164474 69164509 -184092074 - L1MEc LINE L1 -5201 1014 805 1878 225 16 24 chr2 69164499 69164993 -184091590 - L1ME1 LINE L1 -43 6123 5634 * 1455 310 39 49 chr2 69164985 69165781 -184090802 - L1MEc LINE L1 -5571 825 38 * 227 273 131 51 chr2 69165797 69165847 -184090736 - L1ME1 LINE L1 -2163 3983 3938 2025 116 7 10 chr2 69165847 69166140 -184090443 + AluSg SINE Alu 1 292 -18 227 273 131 51 chr2 69166140 69166463 -184090120 - L1ME1 LINE L1 -2208 3938 3580 338 209 44 165 chr2 69166764 69167152 -184089431 - L1ME1 LINE L1 -3124 3022 2682 2300 96 0 3 chr2 69167555 69167847 -184088736 + AluSq SINE Alu 1 291 -22 1046 206 51 82 chr2 69168347 69168701 -184087882 - MER2 DNA MER2_type 0 344 2 8353 185 11 19 chr2 69168904 69169687 -184086896 + L1MA4A LINE L1 1249 2036 -4813 1773 118 0 0 chr2 69169687 69169949 -184086634 + L1PA14 LINE L1 5891 6152 -9 8353 185 11 19 chr2 69169949 69170833 -184085750 + L1MA4A LINE L1 2036 2904 -3945 1651 67 0 0 chr2 69170858 69171067 -184085516 - L1PA5 LINE L1 -8 6146 5938 683 136 0 8 chr2 69171265 69171383 -184085200 - L1PA5 LINE L1 -150 6004 5888 14360 171 36 8 chr2 69171385 69173423 -184083160 + L1MA4A LINE L1 2915 4894 -2111 2860 3 0 3 chr2 69173423 69173735 -184082848 - AluYa5 SINE Alu 0 311 1 14360 171 36 8 chr2 69173735 69175675 -184080908 + L1MA4A LINE L1 4894 6994 -11 421 392 35 14 chr2 69175825 69176154 -184080429 + L2 LINE L2 2766 3099 -173 255 364 0 33 chr2 69176932 69177053 -184079530 + MIR SINE MIR 24 140 -122 220 295 200 9 chr2 69177384 69177489 -184079094 - MIR3 SINE MIR -50 158 34 1404 298 37 39 chr2 69177545 69178062 -184078521 + LTR33 LTR ERVL 1 516 -5 246 306 0 0 chr2 69178085 69178147 -184078436 - MER5B DNA MER1_type -115 63 2 204 40 0 0 chr2 69178191 69178216 -184078367 + (CA)n Simple_repeat Simple_repeat 2 26 0 42352 34 25 1 chr2 69179520 69185514 -184071069 + L1PA2 LINE L1 13 6155 0 365 0 0 22 chr2 69186414 69186460 -184070123 + (TG)n Simple_repeat Simple_repeat 1 45 0 452 289 46 52 chr2 69187381 69187575 -184069008 - MIR SINE MIR -22 240 48 192 77 0 0 chr2 69189490 69189516 -184067067 + (TG)n Simple_repeat Simple_repeat 1 26 0 5657 123 23 0 chr2 69189590 69190828 -184065755 - L1PA16 LINE L1 -2 6164 4915 303 294 78 61 chr2 69193066 69193148 -184063435 + MER5A DNA MER1_type 1 80 -109 2252 110 0 7 chr2 69193148 69193457 -184063126 + AluSg1 SINE Alu 1 307 -2 303 294 78 61 chr2 69193457 69193554 -184063029 + MER5A DNA MER1_type 80 183 -6 392 294 192 0 chr2 69193684 69193830 -184062753 + MER5A DNA MER1_type 4 177 -12 349 289 16 138 chr2 69194152 69194327 -184062256 + L3 LINE CR1 1320 1456 -121 1072 151 17 0 chr2 69194327 69194499 -184062084 - FAM SINE Alu 0 175 1 349 289 16 138 chr2 69194499 69194576 -184062007 + L3 LINE CR1 1456 1541 -36 186 189 0 0 chr2 69194630 69194667 -184061916 + (CATA)n Simple_repeat Simple_repeat 2 38 0 583 282 7 0 chr2 69195005 69195147 -184061436 + MIR SINE MIR 99 241 -21 1963 149 0 3 chr2 69197683 69197979 -184058604 + AluSx SINE Alu 1 295 -17 506 275 109 85 chr2 69198329 69198870 -184057713 + MLT1K LTR MaLR 30 583 -5 773 288 42 8 chr2 69198879 69199119 -184057464 - MIR SINE MIR -10 252 5 698 245 128 0 chr2 69199266 69199454 -184057129 - L2 LINE L2 -3 3310 3099 3878 147 28 15 chr2 69199965 69200645 -184055938 + L1PA16 LINE L1 5473 6161 -5 362 265 146 47 chr2 69202086 69202287 -184054296 + MIR SINE MIR 3 220 -42 322 360 105 7 chr2 69202615 69202768 -184053815 + L2 LINE L2 3102 3269 -3 180 111 0 0 chr2 69202935 69202962 -184053621 + (TC)n Simple_repeat Simple_repeat 2 28 0 465 19 0 0 chr2 69203007 69203061 -184053522 + (TG)n Simple_repeat Simple_repeat 1 54 0 1218 123 4 102 chr2 69204053 69204289 -184052294 - AluSg/x SINE Alu -15 297 85 212 316 77 26 chr2 69205568 69205685 -184050898 - L2 LINE L2 -253 3019 2897 228 306 0 0 chr2 69206390 69206452 -184050131 - L2 LINE L2 -1035 2279 2218 205 195 0 0 chr2 69208417 69208458 -184048125 + T-rich Low_complexity Low_complexity 2 42 0 408 218 91 9 chr2 69208525 69208635 -184047948 - L1ME1 LINE L1 -5 6161 6043 42886 37 23 8 chr2 69208637 69214680 -184041903 + L1PA3 LINE L1 13 6147 -8 1561 214 95 3 chr2 69214682 69215041 -184041542 - L1ME1 LINE L1 -118 6048 5657 1705 184 10 10 chr2 69215379 69215684 -184040899 + AluJo SINE Alu 1 305 -7 361 232 0 133 chr2 69216186 69216337 -184040246 + MER94 DNA DNA 3 133 -1 1538 184 3 21 chr2 69216520 69216803 -184039780 - AluJo SINE Alu -10 302 25 802 301 70 73 chr2 69216927 69217660 -184038923 + L2 LINE L2 2554 3297 -16 355 246 63 67 chr2 69217814 69218011 -184038572 - L1ME1 LINE L1 -728 5514 5317 342 251 146 62 chr2 69218046 69218369 -184038214 - L1ME1 LINE L1 -855 5291 4942 1153 199 0 37 chr2 69218602 69218848 -184037735 - AluJo SINE Alu 0 312 76 300 338 114 11 chr2 69218917 69219180 -184037403 - L1ME1 LINE L1 -1544 4602 4313 613 328 80 46 chr2 69219472 69220037 -184036546 - L2 LINE L2 0 3272 2680 348 283 92 25 chr2 69220153 69220273 -184036310 - L2 LINE L2 -8 3264 3137 714 259 70 0 chr2 69221001 69221186 -184035397 - MER58A DNA MER1_type -1 223 26 297 306 9 18 chr2 69221207 69221318 -184035265 - L2 LINE L2 -994 2320 2211 2305 95 0 43 chr2 69222752 69223079 -184033504 + AluSp SINE Alu 1 313 0 242 209 338 7 chr2 69224181 69224320 -184032263 - MER113 DNA MER1_type? -336 185 1 2864 161 6 58 chr2 69225476 69226015 -184030568 + L1MB2 LINE L1 5661 6171 0 381 293 108 0 chr2 69228700 69228857 -184027726 - MIR SINE MIR -8 254 81 202 186 0 23 chr2 69230301 69230344 -184026239 - MIR SINE MIR -109 153 112 416 298 99 11 chr2 69231181 69231362 -184025221 + MIR SINE MIR 32 228 -34 745 288 154 25 chr2 69232677 69233035 -184023548 + MER115 DNA AcHobo 290 693 0 427 255 185 23 chr2 69235262 69235478 -184021105 - MIR SINE MIR 0 262 12 276 278 33 22 chr2 69236179 69236269 -184020314 - MIR SINE MIR -14 248 158 364 182 0 39 chr2 69236289 69236366 -184020217 + LTR32 LTR ERVL 15 88 -383 * 2790 143 40 18 chr2 69236341 69236796 -184019787 + LTR32 LTR ERVL 7 471 0 2269 138 15 153 chr2 69237050 69237572 -184019011 + LTR32 LTR ERVL 22 471 0 279 0 0 0 chr2 69237618 69237649 -184018934 + (CA)n Simple_repeat Simple_repeat 2 32 0 2104 125 0 7 chr2 69239084 69239387 -184017196 + AluSx SINE Alu 5 305 -7 522 281 7 0 chr2 69239623 69239769 -184016814 - MER5B DNA MER1_type -5 173 27 306 317 58 19 chr2 69239898 69240058 -184016525 + MIR3 SINE MIR 35 202 -6 213 288 0 36 chr2 69240811 69240922 -184015661 + (CATATA)n Simple_repeat Simple_repeat 2 108 0 253 250 8 92 chr2 69241146 69241266 -184015317 + L1ME4a LINE L1 5785 5894 -227 334 264 132 14 chr2 69241301 69241445 -184015138 + L1ME4a LINE L1 5961 6121 0 219 188 0 0 chr2 69244143 69244191 -184012392 + T-rich Low_complexity Low_complexity 1 48 0 416 239 128 8 chr2 69245798 69245915 -184010668 + LTR67 LTR ERVL 427 557 0 3613 56 7 7 chr2 69246195 69246643 -184009940 + LTR7 LTR ERV1 1 448 -2 3332 93 7 0 chr2 69246645 69247098 -184009485 + HERVH LTR ERV1 1 456 -7257 297 0 0 0 chr2 69247364 69247397 -184009186 + (T)n Simple_repeat Simple_repeat 1 33 0 207 0 0 0 chr2 69248134 69248157 -184008426 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2317 110 0 0 chr2 69248165 69248473 -184008110 - AluSx SINE Alu -4 308 1 311 161 58 92 chr2 69248490 69248577 -184008006 + Charlie8 DNA MER1_type 75 158 -2259 243 257 14 14 chr2 69251853 69251923 -184004660 + Charlie8 DNA MER1_type 5 74 -2343 229 287 106 43 chr2 69252223 69252411 -184004172 - MIR3 SINE MIR -8 200 1 227 170 106 0 chr2 69253339 69253386 -184003197 + L2 LINE L2 3262 3313 0 432 37 0 0 chr2 69253990 69254044 -184002539 + (TG)n Simple_repeat Simple_repeat 2 55 0 200 189 0 0 chr2 69254499 69254536 -184002047 + (CATA)n Simple_repeat Simple_repeat 3 39 0 189 321 48 24 chr2 69254685 69254769 -184001814 + L3b LINE CR1 1309 1394 -189 857 220 80 15 chr2 69255235 69255435 -184001148 + MIR SINE MIR 13 225 -37 246 255 0 53 chr2 69255734 69255828 -184000755 + LTR67 LTR ERVL 459 547 -10 38962 34 23 1 chr2 69255934 69261924 -183994659 - L1PA3 LINE L1 -2 6153 13 204 40 0 0 chr2 69263230 69263255 -183993328 + (TG)n Simple_repeat Simple_repeat 2 26 0 249 306 0 0 chr2 69263299 69263361 -183993222 + MER5B DNA MER1_type 2 63 -115 1393 298 37 39 chr2 69263384 69263901 -183992682 - LTR33 LTR ERVL -5 516 1 217 295 200 9 chr2 69263957 69264062 -183992521 + MIR3 SINE MIR 34 158 -50 237 364 0 33 chr2 69264393 69264514 -183992069 - MIR SINE MIR -122 140 24 533 0 13 76 chr2 69264644 69264723 -183991860 + HERVH LTR ERV1 7640 7713 0 3086 75 5 12 chr2 69264723 69265148 -183991435 + LTR7 LTR ERV1 1 422 -28 427 244 81 16 chr2 69265486 69265609 -183990974 + LTR67 LTR ERVL 427 557 0 19440 104 14 17 chr2 69266195 69269122 -183987461 + HERVH LTR ERV1 77 2995 -4718 977 127 7 0 chr2 69269101 69269251 -183987332 + HERVH LTR ERV1 3140 3290 -4423 * 3373 112 6 4 chr2 69269250 69269743 -183986840 + HERVH LTR ERV1 3500 3993 -3720 4245 157 3 1 chr2 69269745 69270406 -183986177 + HERVH LTR ERV1 4488 5149 -2564 1024 93 0 7 chr2 69270407 69270557 -183986026 + HERVH LTR ERV1 5600 5748 -1965 4612 167 17 13 chr2 69270671 69272042 -183984541 - L1P5 LINE L1 -380 5776 4389 207 0 0 0 chr2 69274888 69274911 -183981672 + (TG)n Simple_repeat Simple_repeat 2 24 0 204 286 0 18 chr2 69275042 69275098 -183981485 + GA-rich Low_complexity Low_complexity 3 57 0 544 304 80 22 chr2 69276640 69276864 -183979719 + MIR SINE MIR 1 237 -25 225 87 43 22 chr2 69279874 69279920 -183976663 + A-rich Low_complexity Low_complexity 2 48 0 1087 272 144 0 chr2 69281538 69281865 -183974718 - L3b LINE CR1 -85 1498 1125 415 167 44 22 chr2 69281917 69282006 -183974577 - Charlie1 DNA MER1_type 0 2761 2671 331 87 0 0 chr2 69282006 69282052 -183974531 - MADE1 DNA Mariner 0 80 35 878 242 36 0 chr2 69282098 69282317 -183974266 - Charlie1 DNA MER1_type -2534 227 1 1018 270 45 50 chr2 69283464 69283905 -183972678 - MER115 DNA AcHobo -251 442 4 1833 179 0 7 chr2 69284384 69284692 -183971891 - AluJo SINE Alu -6 306 1 21 36 0 0 chr2 69284802 69284830 -183971753 + AT_rich Low_complexity Low_complexity 1 28 0 3036 220 37 5 chr2 69285050 69285772 -183970811 + L1MD2 LINE L1 5311 6068 -98 1743 167 0 14 chr2 69286295 69286577 -183970006 - AluJb SINE Alu -32 280 3 23 33 0 0 chr2 69286835 69286865 -183969718 + AT_rich Low_complexity Low_complexity 1 30 0 2456 71 0 23 chr2 69288508 69288817 -183967766 - AluY SINE Alu -9 302 1 28 29 0 0 chr2 69288886 69288921 -183967662 + AT_rich Low_complexity Low_complexity 1 35 0 1508 213 117 21 chr2 69290362 69290695 -183965888 + MLT1A1 LTR MaLR 1 365 0 623 239 142 7 chr2 69290824 69290979 -183965604 - MER45A DNA AcHobo 0 178 3 2494 161 39 2 chr2 69291122 69291533 -183965050 - MSTB LTR MaLR 0 426 1 390 94 0 0 chr2 69292053 69292117 -183964466 + (CA)n Simple_repeat Simple_repeat 2 65 0 1649 175 67 15 chr2 69292415 69292746 -183963837 - L1PB4 LINE L1 0 6156 5809 234 0 0 0 chr2 69292747 69292773 -183963810 + (TG)n Simple_repeat Simple_repeat 2 27 0 180 0 0 0 chr2 69292776 69292796 -183963787 + (TA)n Simple_repeat Simple_repeat 2 21 0 7607 38 0 0 chr2 69342796 69344369 -183912214 + L1PA5 LINE L1 4407 5979 -175 301 169 72 0 chr2 69344469 69344552 -183912031 + L1MC2 LINE L1 6256 6344 0 3540 214 52 13 chr2 69344555 69346215 -183910368 + L1ME1 LINE L1 4398 6122 -44 1950 151 35 0 chr2 69346344 69346688 -183909895 + MER46B DNA MER2_type 6 236 0 3534 190 45 23 chr2 69347107 69348430 -183908153 + L1MB5 LINE L1 4705 6064 -110 1117 179 0 0 chr2 69348530 69348703 -183907880 - AluJo SINE Alu -139 173 1 2372 95 3 13 chr2 69348949 69349264 -183907319 - AluSp SINE Alu -1 312 1 543 267 113 27 chr2 69349745 69349966 -183906617 - MIR SINE MIR 0 262 23 420 248 47 49 chr2 69350452 69350601 -183905982 + MIR3 SINE MIR 59 208 0 229 242 16 0 chr2 69353535 69353597 -183902986 + (TA)n Simple_repeat Simple_repeat 1 63 0 454 273 0 0 chr2 69353950 69354060 -183902523 + MIR3 SINE MIR 98 207 -1 931 163 6 6 chr2 69354073 69354251 -183902332 + MER41B LTR ERV1 371 548 -87 211 261 22 0 chr2 69354269 69354315 -183902268 + MIR3 SINE MIR 111 157 -51 26 64 0 0 chr2 69354529 69354576 -183902007 + AT_rich Low_complexity Low_complexity 1 47 0 924 206 11 0 chr2 69354667 69354851 -183901732 - AluYa5 SINE Alu 0 311 126 1454 160 0 14 chr2 69354984 69355259 -183901324 - L1PA5 LINE L1 0 6154 5884 204 40 0 0 chr2 69356490 69356515 -183900068 + (CCGCG)n Simple_repeat Simple_repeat 3 27 0 290 87 22 0 chr2 69357595 69357641 -183898942 + (GA)n Simple_repeat Simple_repeat 2 48 0 216 158 0 0 chr2 69357841 69357879 -183898704 + CT-rich Low_complexity Low_complexity 2 39 0 207 0 0 0 chr2 69358054 69358077 -183898506 + (T)n Simple_repeat Simple_repeat 1 23 0 6189 102 4 9 chr2 69359936 69360872 -183895711 - L1PA10 LINE L1 0 6291 5391 270 194 97 0 chr2 69360868 69360930 -183895653 + L1P LINE L1 1792 1859 -4287 * 858 180 0 42 chr2 69360915 69361104 -183895479 - L1MA7 LINE L1 -138 6153 5973 271 330 0 0 chr2 69361172 69361269 -183895314 + MIR SINE MIR 45 141 -67 2202 118 0 10 chr2 69361275 69361589 -183894994 + AluSx SINE Alu 1 311 -1 236 319 74 115 chr2 69361724 69361994 -183894589 + L3 LINE CR1 1318 1576 -1 270 266 77 63 chr2 69362738 69362881 -183893702 + MIR3 SINE MIR 45 189 -19 337 292 28 28 chr2 69363385 69363529 -183893054 + L2 LINE L2 3118 3261 -52 213 292 42 0 chr2 69363639 69363711 -183892872 - MIR SINE MIR -69 139 65 442 230 58 73 chr2 69365104 69365295 -183891288 + MIR SINE MIR 63 250 -12 39763 42 30 2 chr2 69366164 69371026 -183885557 + L1P LINE L1 2 4997 -1149 24 0 0 0 chr2 69371341 69371365 -183885218 + AT_rich Low_complexity Low_complexity 1 24 0 1547 49 11 0 chr2 69371479 69371663 -183884920 - AluY SINE Alu 0 311 126 278 224 71 24 chr2 69371671 69371756 -183884827 - L1MC/D LINE L1 -1988 5820 5732 4802 41 2 0 chr2 69371800 69372342 -183884241 - L1PA5 LINE L1 -1 6153 5611 183 244 22 0 chr2 69372424 69372469 -183884114 - L2 LINE L2 -5 3308 3263 212 244 111 89 chr2 69372922 69373057 -183883526 - MIR SINE MIR -7 255 118 1967 130 4 7 chr2 69374292 69374569 -183882014 - AluSx SINE Alu -36 276 1 373 203 0 0 chr2 69375825 69375889 -183880694 + L2 LINE L2 3208 3271 -1 21 0 0 0 chr2 69375938 69375959 -183880624 + AT_rich Low_complexity Low_complexity 1 21 0 310 341 70 0 chr2 69377430 69377559 -183879024 - MLT1J LTR MaLR -51 460 323 438 217 122 9 chr2 69377828 69377943 -183878640 - MLT1J LTR MaLR -316 195 68 1030 253 92 6 chr2 69378961 69379289 -183877294 + LTR16A1 LTR ERVL 102 457 0 23 54 0 0 chr2 69379746 69379783 -183876800 + AT_rich Low_complexity Low_complexity 1 37 0 310 154 19 0 chr2 69383039 69383091 -183873492 + L1MA8 LINE L1 5713 5765 -535 1026 150 0 7 chr2 69383091 69383244 -183873339 + FRAM SINE Alu 1 150 -26 3042 131 51 12 chr2 69383258 69383769 -183872814 + L1MA8 LINE L1 5759 6289 -2 1836 113 50 20 chr2 69387818 69388119 -183868464 + AluSg SINE Alu 1 310 0 389 318 162 23 chr2 69388157 69388459 -183868124 - MLT1I LTR MaLR -1 408 65 2439 99 3 0 chr2 69388743 69389055 -183867528 - AluSp SINE Alu 0 313 1 234 321 105 19 chr2 69389262 69389424 -183867159 - MIR SINE MIR -1 261 86 552 303 171 13 chr2 69389549 69389859 -183866724 + L2 LINE L2 2955 3313 0 364 274 51 0 chr2 69390040 69390157 -183866426 + L1ME3 LINE L1 6040 6162 0 1640 177 32 0 chr2 69390177 69390454 -183866129 + AluJb SINE Alu 21 306 -6 23 24 0 24 chr2 69390454 69390474 -183866109 + AT_rich Low_complexity Low_complexity 1 20 -20 2082 147 0 0 chr2 69390474 69390781 -183865802 + AluSx SINE Alu 1 307 -5 23 24 0 24 chr2 69390781 69390801 -183865782 + AT_rich Low_complexity Low_complexity 20 40 0 21 0 0 0 chr2 69390817 69390838 -183865745 + AT_rich Low_complexity Low_complexity 1 21 0 7836 23 0 2 chr2 69391834 69392694 -183863889 + L1PA2 LINE L1 5298 6155 0 194 188 0 0 chr2 69392931 69392963 -183863620 + MER5A DNA MER1_type 115 146 -43 193 345 0 0 chr2 69393091 69393146 -183863437 - L2 LINE L2 -13 3300 3246 293 378 87 6 chr2 69393349 69393521 -183863062 + MER5A DNA MER1_type 1 186 -3 668 249 17 12 chr2 69393620 69393793 -183862790 + L1MEc LINE L1 35 208 -6188 412 250 8 65 chr2 69393799 69393923 -183862660 + L1MEc LINE L1 251 367 -6029 953 241 16 97 chr2 69393952 69394405 -183862178 + L1M4 LINE L1 3340 3755 -2391 1503 160 67 11 chr2 69394422 69394690 -183861893 + MER2 DNA MER2_type 9 291 -54 1972 158 37 0 chr2 69394795 69395117 -183861466 + LTR32 LTR ERVL 16 349 -122 794 199 0 7 chr2 69395245 69395391 -183861192 + LTR32 LTR ERVL 327 471 0 589 209 20 75 chr2 69395391 69395592 -183860991 + L1M4 LINE L1 3790 3979 -2167 1040 156 40 0 chr2 69395593 69395766 -183860817 + MLT1C LTR MaLR 1 180 -287 649 247 36 12 chr2 69395767 69395933 -183860650 + MLT1C LTR MaLR 298 467 0 1609 230 44 12 chr2 69395933 69396342 -183860241 + L1M4 LINE L1 3980 4401 -1745 * 1620 208 147 90 chr2 69396338 69396992 -183859591 + L1MC3 LINE L1 7 697 -5729 786 240 26 18 chr2 69396990 69397219 -183859364 - L1MEc LINE L1 -3569 2646 2416 * 1678 240 62 30 chr2 69397217 69397750 -183858833 + L1MC3 LINE L1 4181 4730 -1696 1271 194 12 28 chr2 69397772 69398019 -183858564 + AluJo SINE Alu 47 289 -23 11153 180 56 53 chr2 69398019 69399823 -183856760 + L1MC3 LINE L1 4724 6521 -1544 1845 123 0 61 chr2 69399823 69400133 -183856450 + AluSg SINE Alu 7 297 -13 11153 180 56 53 chr2 69400133 69400755 -183855828 + L1MC3 LINE L1 6521 7140 -925 240 35 0 0 chr2 69400755 69400784 -183855799 + (CA)n Simple_repeat Simple_repeat 2 30 0 11153 180 56 53 chr2 69400784 69401569 -183855014 + L1MC3 LINE L1 7140 7933 -132 32149 72 2 0 chr2 69401681 69405792 -183850791 - L1P LINE L1 -2027 4119 1 241 302 0 0 chr2 69406213 69406276 -183850307 - L2 LINE L2 -1 3312 3250 294 298 60 24 chr2 69406660 69406828 -183849755 - L1MEc LINE L1 -5312 941 720 552 295 92 7 chr2 69407316 69407577 -183849006 - L1MEc LINE L1 -5762 443 36 588 249 94 45 chr2 69407659 69407860 -183848723 + MLT1L LTR MaLR 405 615 0 183 308 108 0 chr2 69407860 69407925 -183848658 - L3 LINE CR1 -330 1247 1176 2266 122 54 25 chr2 69408424 69408778 -183847805 - THE1B LTR MaLR 0 364 1 2248 108 3 3 chr2 69408978 69409284 -183847299 + AluSq SINE Alu 1 306 -7 261 267 22 11 chr2 69409337 69409427 -183847156 - LTR67 LTR ERVL -8 549 459 531 355 30 40 chr2 69409649 69409948 -183846635 - LTR67 LTR ERVL -232 325 30 219 219 146 12 chr2 69409997 69410079 -183846504 + MIR SINE MIR 153 245 -17 2066 128 149 11 chr2 69411409 69411785 -183844798 - MSTA LTR MaLR 0 428 1 1683 196 6 20 chr2 69412587 69412929 -183843654 + MSTD LTR MaLR 1 337 -59 4571 103 37 30 chr2 69412954 69413309 -183843274 - L1PB1 LINE L1 -1 6150 5799 393 117 0 0 chr2 69413309 69413369 -183843214 + (TG)n Simple_repeat Simple_repeat 2 61 0 4571 103 37 30 chr2 69413369 69413790 -183842793 - L1PB1 LINE L1 -352 5799 5368 565 88 0 0 chr2 69413790 69413870 -183842713 + MSTD LTR MaLR 317 396 0 25 83 0 0 chr2 69414288 69414348 -183842235 + AT_rich Low_complexity Low_complexity 1 60 0 2235 99 0 0 chr2 69414977 69415296 -183841287 + AluSg SINE Alu 1 319 0 1804 154 0 33 chr2 69416499 69416805 -183839778 - AluSx SINE Alu -16 296 1 22 0 0 0 chr2 69417107 69417129 -183839454 + AT_rich Low_complexity Low_complexity 1 22 0 306 319 80 59 chr2 69418374 69418518 -183838065 + L1ME4a LINE L1 5550 5690 -431 279 0 0 0 chr2 69418518 69418549 -183838034 + (CA)n Simple_repeat Simple_repeat 2 32 0 306 319 80 59 chr2 69418549 69418742 -183837841 + L1ME4a LINE L1 5690 5894 -227 1042 144 0 40 chr2 69418913 69419086 -183837497 - FRAM SINE Alu 0 166 1 1699 161 0 58 chr2 69419438 69419748 -183836835 + AluJo SINE Alu 1 292 -20 2017 95 3 44 chr2 69421010 69421325 -183835258 + AluSq SINE Alu 1 302 -11 193 295 0 16 chr2 69421687 69421748 -183834835 + MIR SINE MIR 186 245 -17 184 213 107 27 chr2 69423502 69423577 -183833006 + MIR SINE MIR 127 207 -55 281 300 171 18 chr2 69426500 69426670 -183829913 - MIR3 SINE MIR -5 203 8 215 241 0 0 chr2 69427054 69427108 -183829475 + A-rich Low_complexity Low_complexity 4 57 0 267 103 0 0 chr2 69427547 69427586 -183828997 + (TTTTG)n Simple_repeat Simple_repeat 1 39 0 336 48 0 0 chr2 69427948 69427990 -183828593 + (TG)n Simple_repeat Simple_repeat 2 43 0 314 286 0 0 chr2 69428035 69428105 -183828478 + MIR3 SINE MIR 92 161 -47 216 0 0 0 chr2 69428313 69428337 -183828246 + (CA)n Simple_repeat Simple_repeat 1 24 0 201 74 0 0 chr2 69430968 69430995 -183825588 + (TG)n Simple_repeat Simple_repeat 2 28 0 212 0 0 35 chr2 69431562 69431591 -183824992 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 24 0 0 0 chr2 69432248 69432272 -183824311 + AT_rich Low_complexity Low_complexity 1 24 0 189 0 0 0 chr2 69434635 69434656 -183821927 + (TA)n Simple_repeat Simple_repeat 2 22 0 24 32 0 0 chr2 69436810 69436841 -183819742 + AT_rich Low_complexity Low_complexity 1 31 0 28 29 0 0 chr2 69436868 69436903 -183819680 + AT_rich Low_complexity Low_complexity 1 35 0 264 167 0 0 chr2 69437091 69437139 -183819444 + T-rich Low_complexity Low_complexity 1 48 0 228 200 0 0 chr2 69438078 69438128 -183818455 + (CA)n Simple_repeat Simple_repeat 2 51 0 226 233 0 33 chr2 69439945 69440005 -183816578 + G-rich Low_complexity Low_complexity 2 59 0 216 0 0 0 chr2 69440305 69440329 -183816254 + (A)n Simple_repeat Simple_repeat 1 24 0 23 0 0 0 chr2 69442689 69442712 -183813871 + GC_rich Low_complexity Low_complexity 1 23 0 213 39 0 0 chr2 69443831 69443857 -183812726 + (TTTCC)n Simple_repeat Simple_repeat 3 28 0 25 0 0 0 chr2 69443876 69443901 -183812682 + AT_rich Low_complexity Low_complexity 1 25 0 213 159 0 0 chr2 69445850 69445894 -183810689 + CT-rich Low_complexity Low_complexity 1 44 0 23 33 0 0 chr2 69447085 69447115 -183809468 + AT_rich Low_complexity Low_complexity 1 30 0 575 220 34 0 chr2 69448372 69448490 -183808093 + FLAM_A SINE Alu 12 133 -9 606 291 99 0 chr2 69452029 69452201 -183804382 + MIR SINE MIR 32 220 -42 219 186 43 14 chr2 69455934 69456004 -183800579 + A-rich Low_complexity Low_complexity 5 76 0 196 259 19 37 chr2 69456648 69456702 -183799881 + MIR3 SINE MIR 108 160 -48 351 349 183 20 chr2 69457288 69457589 -183798994 + L1ME4a LINE L1 5341 5690 -472 29 0 0 0 chr2 69458016 69458045 -183798538 + AT_rich Low_complexity Low_complexity 1 29 0 309 274 105 0 chr2 69458233 69458328 -183798255 - MLT1J2 LTR MaLR -2 448 344 568 206 8 23 chr2 69458483 69458614 -183797969 - MLT1J1 LTR MaLR -317 129 1 1126 106 0 25 chr2 69458883 69459076 -183797507 - AluSg/x SINE Alu 0 315 127 318 260 57 49 chr2 69459261 69459384 -183797199 + MIR SINE MIR 113 236 -26 245 284 136 45 chr2 69459495 69459826 -183796757 + L1ME4a LINE L1 5746 6106 -15 309 305 25 0 chr2 69459883 69460001 -183796582 - L1MC4 LINE L1 -2 8040 7920 307 323 115 8 chr2 69460194 69460324 -183796259 + MIR3 SINE MIR 19 162 -46 1162 117 0 0 chr2 69460401 69460572 -183796011 + L1PA13 LINE L1 5989 6159 -4 354 336 56 0 chr2 69461346 69461471 -183795112 + MIR3 SINE MIR 36 167 -41 2216 117 10 3 chr2 69461473 69461782 -183794801 - AluSx SINE Alu -1 311 1 21 36 0 0 chr2 69461782 69461810 -183794773 + AT_rich Low_complexity Low_complexity 1 28 0 4640 136 31 18 chr2 69461811 69462652 -183793931 - L1PA16 LINE L1 -16 6150 5299 304 284 0 11 chr2 69463118 69463213 -183793370 - MLT1K LTR MaLR -6 582 489 269 276 46 11 chr2 69463213 69463300 -183793283 - MLT1L LTR MaLR -150 465 376 4547 126 59 9 chr2 69463550 69464344 -183792239 + MER6 DNA MER2_type 32 865 0 2157 159 89 10 chr2 69464513 69464908 -183791675 + MSTB LTR MaLR 1 426 0 22 0 0 0 chr2 69464996 69465018 -183791565 + AT_rich Low_complexity Low_complexity 1 22 0 1521 203 37 3 chr2 69465028 69465324 -183791259 + AluJo SINE Alu 1 306 -6 260 247 161 12 chr2 69466188 69466269 -183790314 - L2 LINE L2 0 3272 3180 221 314 131 15 chr2 69466469 69466606 -183789977 + MIR SINE MIR 9 161 -101 324 0 0 0 chr2 69467861 69467897 -183788686 + (CA)n Simple_repeat Simple_repeat 2 37 0 1120 238 162 52 chr2 69468315 69468721 -183787862 - Charlie7 DNA MER1_type 0 2612 2252 2155 65 0 42 chr2 69468721 69469027 -183787556 + AluY SINE Alu 1 293 -18 1120 238 162 52 chr2 69469027 69469410 -183787173 - Charlie7 DNA MER1_type -360 2252 1736 672 253 111 58 chr2 69469497 69470018 -183786565 - Charlie7 DNA MER1_type -2035 577 29 429 296 78 70 chr2 69470045 69470430 -183786153 + L2 LINE L2 2926 3313 0 310 394 13 7 chr2 69470473 69470628 -183785955 - MIR3 SINE MIR -35 173 18 400 312 42 9 chr2 69470972 69471180 -183785403 + L1ME LINE L1 5467 5593 -528 2205 97 27 0 chr2 69471317 69471615 -183784968 - AluSc SINE Alu -3 306 1 234 0 0 0 chr2 69472848 69472874 -183783709 + (TG)n Simple_repeat Simple_repeat 2 27 0 1908 110 0 43 chr2 69474006 69474288 -183782295 - AluSg SINE Alu -12 298 29 532 241 29 62 chr2 69478904 69479145 -183777438 - MER113 DNA MER1_type? -288 233 1 388 250 26 60 chr2 69479239 69479355 -183777228 - MIR SINE MIR -73 189 78 216 0 0 0 chr2 69480292 69480316 -183776267 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 195 302 0 0 chr2 69482259 69482312 -183774271 + MER5A DNA MER1_type 74 126 -63 21 36 0 0 chr2 69483115 69483143 -183773440 + AT_rich Low_complexity Low_complexity 1 28 0 234 0 0 0 chr2 69484312 69484338 -183772245 + (CA)n Simple_repeat Simple_repeat 2 27 0 25 0 0 0 chr2 69485237 69485262 -183771321 + AT_rich Low_complexity Low_complexity 1 25 0 368 275 255 10 chr2 69486614 69486814 -183769769 - MIR SINE MIR -12 250 2 483 321 96 77 chr2 69486977 69488174 -183768409 - L2 LINE L2 -1 3271 2057 187 277 71 80 chr2 69488257 69488369 -183768214 - L2 LINE L2 0 3272 3162 328 208 21 31 chr2 69488489 69488585 -183767998 + L3 LINE CR1 1178 1272 -305 309 26 0 0 chr2 69488816 69488854 -183767729 + (TTG)n Simple_repeat Simple_repeat 2 39 0 24 0 0 0 chr2 69489278 69489302 -183767281 + AT_rich Low_complexity Low_complexity 1 24 0 266 313 87 10 chr2 69494202 69494334 -183762249 - MIR SINE MIR -62 146 6 291 175 0 0 chr2 69495018 69495075 -183761508 + A-rich Low_complexity Low_complexity 1 57 0 2156 103 3 7 chr2 69495391 69495692 -183760891 + AluSg SINE Alu 1 300 -10 181 308 39 39 chr2 69496040 69496144 -183760439 - MIR SINE MIR -73 189 86 517 290 30 3 chr2 69496529 69496721 -183759862 - MIR SINE MIR -10 198 1 207 381 24 8 chr2 69496779 69496905 -183759678 - L2 LINE L2 -8 3264 3137 224 315 120 0 chr2 69500501 69500593 -183755990 - L2 LINE L2 -10 3303 3201 1598 191 25 50 chr2 69501012 69501173 -183755410 - Charlie4a DNA MER1_type -1481 480 316 2387 93 3 0 chr2 69501173 69501474 -183755109 + AluSp SINE Alu 1 302 -11 189 0 0 0 chr2 69501474 69501495 -183755088 + (TA)n Simple_repeat Simple_repeat 1 21 0 1598 191 25 50 chr2 69501495 69501808 -183754775 - Charlie4a DNA MER1_type -1643 318 17 1945 144 3 35 chr2 69501891 69502238 -183754345 + MER2 DNA MER2_type 2 337 -8 405 167 33 4 chr2 69503200 69503454 -183753129 + (TA)n Simple_repeat Simple_repeat 1 261 0 204 222 48 48 chr2 69503845 69503908 -183752675 + L2 LINE L2 3246 3308 -5 254 344 98 0 chr2 69504499 69504621 -183751962 - L2 LINE L2 -3 3269 3136 255 235 29 49 chr2 69504754 69504856 -183751727 - MER117 DNA MER1_type -50 147 48 2313 97 0 22 chr2 69509923 69510234 -183746349 - AluSc SINE Alu -3 306 3 283 238 0 32 chr2 69510238 69510301 -183746282 - L2 LINE L2 0 3272 3212 406 283 106 0 chr2 69510696 69510809 -183745774 - L2 LINE L2 0 3272 3148 435 285 49 0 chr2 69511068 69511191 -183745392 + MIR SINE MIR 128 256 -6 841 96 0 29 chr2 69511313 69511449 -183745134 - FLAM_C SINE Alu 0 133 2 207 0 0 0 chr2 69512611 69512634 -183743949 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 2116 137 0 3 chr2 69512636 69512936 -183743647 - AluSp SINE Alu -14 299 1 9331 85 6 1 chr2 69513179 69515240 -183741343 - L1PA7 LINE L1 -4 6150 4084 248 278 26 0 chr2 69515314 69515429 -183741154 - L1MC4 LINE L1 0 8042 7925 2486 68 0 0 chr2 69516473 69516769 -183739814 + AluY SINE Alu 1 296 -15 216 143 0 0 chr2 69520146 69520188 -183736395 + (TG)n Simple_repeat Simple_repeat 1 42 0 292 269 183 0 chr2 69522526 69522630 -183733953 - L2 LINE L2 -4 3268 3146 240 351 76 43 chr2 69522772 69522957 -183733626 - MIR SINE MIR -46 216 26 252 0 0 0 chr2 69523153 69523181 -183733402 + (T)n Simple_repeat Simple_repeat 1 28 0 707 285 123 0 chr2 69576520 69576748 -183679835 + MIR SINE MIR 2 257 -5 2215 114 10 0 chr2 69577205 69577513 -183679070 - AluY SINE Alu 0 311 1 688 249 55 11 chr2 69577826 69578007 -183678576 + MIR SINE MIR 43 231 -31 354 317 129 7 chr2 69578333 69578562 -183678021 + MIR SINE MIR 2 257 -5 1789 133 77 3 chr2 69578638 69578924 -183677659 - AluSq SINE Alu -6 307 1 2392 82 7 0 chr2 69579354 69579657 -183676926 - AluY SINE Alu 0 311 7 22 0 0 0 chr2 69582956 69582978 -183673605 + AT_rich Low_complexity Low_complexity 1 22 0 224 292 31 0 chr2 69583799 69583864 -183672719 - MIR SINE MIR -129 133 67 233 304 101 0 chr2 69584301 69584380 -183672203 - L2 LINE L2 0 3272 3186 220 226 37 93 chr2 69584843 69584961 -183671622 + MIR SINE MIR 69 187 -48 468 0 0 0 chr2 69588791 69588843 -183667740 + (TTTTG)n Simple_repeat Simple_repeat 1 52 0 1718 160 4 4 chr2 69588845 69589120 -183667463 - AluJo SINE Alu -33 279 5 23 0 0 0 chr2 69589941 69589964 -183666619 + AT_rich Low_complexity Low_complexity 1 23 0 261 0 0 0 chr2 69590355 69590384 -183666199 + (CA)n Simple_repeat Simple_repeat 2 30 0 266 0 0 29 chr2 69593581 69593616 -183662967 + (TC)n Simple_repeat Simple_repeat 1 34 0 2034 153 32 36 chr2 69595589 69596027 -183660556 - L1MB8 LINE L1 -1 6177 5742 2349 106 3 0 chr2 69596324 69596636 -183659947 + AluSp SINE Alu 1 313 0 2054 139 30 0 chr2 69597186 69597450 -183659133 + AluSq SINE Alu 1 277 -36 261 0 0 0 chr2 69597450 69597479 -183659104 + (GA)n Simple_repeat Simple_repeat 2 30 0 2054 139 30 0 chr2 69597479 69597517 -183659066 + AluSq SINE Alu 277 312 -1 604 200 31 0 chr2 69597613 69597743 -183658840 - MER94 DNA DNA 0 134 1 21 57 0 0 chr2 69598110 69598145 -183658438 + AT_rich Low_complexity Low_complexity 1 35 0 1636 198 4 0 chr2 69598149 69598422 -183658161 - AluJb SINE Alu -38 274 1 207 0 0 0 chr2 69598427 69598450 -183658133 + (T)n Simple_repeat Simple_repeat 1 23 0 1663 153 60 27 chr2 69598638 69598938 -183657645 + AluJb SINE Alu 1 310 -2 288 0 0 0 chr2 69600365 69600397 -183656186 + (T)n Simple_repeat Simple_repeat 1 32 0 222 319 0 0 chr2 69601706 69601775 -183654808 + (CATA)n Simple_repeat Simple_repeat 2 70 0 395 257 42 111 chr2 69602725 69602986 -183653597 + L3 LINE CR1 1052 1294 -283 438 55 11 132 chr2 69603023 69603049 -183653534 - MADE1 DNA Mariner 0 80 52 1306 26 0 0 chr2 69603049 69603205 -183653378 - L1PA5 LINE L1 0 6154 5999 438 55 11 132 chr2 69603205 69603269 -183653314 - MADE1 DNA Mariner -28 52 1 277 321 134 32 chr2 69603284 69603471 -183653112 + L3 LINE CR1 1369 1574 -3 211 184 41 0 chr2 69603862 69603911 -183652672 + MIR SINE MIR 67 117 -145 266 217 17 33 chr2 69603917 69603977 -183652606 + MIR SINE MIR 85 143 -65 22 0 0 0 chr2 69604177 69604199 -183652384 + AT_rich Low_complexity Low_complexity 1 22 0 252 143 0 0 chr2 69610327 69610369 -183646214 + (TC)n Simple_repeat Simple_repeat 2 43 0 24 0 0 0 chr2 69611619 69611643 -183644940 + AT_rich Low_complexity Low_complexity 1 24 0 230 114 0 23 chr2 69612311 69612355 -183644228 + (GA)n Simple_repeat Simple_repeat 1 43 0 220 186 0 0 chr2 69612734 69612777 -183643806 + G-rich Low_complexity Low_complexity 1 43 0 34 42 0 0 chr2 69612801 69612849 -183643734 + AT_rich Low_complexity Low_complexity 1 48 0 198 118 0 0 chr2 69613181 69613215 -183643368 + (CAG)n Simple_repeat Simple_repeat 3 36 0 205 244 0 0 chr2 69613292 69613337 -183643246 + C-rich Low_complexity Low_complexity 6 50 0 224 228 35 18 chr2 69613662 69613776 -183642807 + CT-rich Low_complexity Low_complexity 6 121 0 353 320 78 78 chr2 69614369 69614678 -183641905 - L1M2 LINE L1 -5701 1148 840 200 275 25 12 chr2 69616101 69616181 -183640402 + CT-rich Low_complexity Low_complexity 5 85 0 25 0 0 0 chr2 69617981 69618006 -183638577 + GC_rich Low_complexity Low_complexity 1 25 0 204 40 0 0 chr2 69618267 69618292 -183638291 + (GA)n Simple_repeat Simple_repeat 2 26 0 206 156 22 0 chr2 69619186 69619231 -183637352 + T-rich Low_complexity Low_complexity 1 46 0 248 0 31 0 chr2 69619546 69619578 -183637005 + (TC)n Simple_repeat Simple_repeat 1 33 0 225 0 0 0 chr2 69619577 69619602 -183636981 + (CA)n Simple_repeat Simple_repeat 1 25 0 * 471 18 0 0 chr2 69622944 69623000 -183633583 + (TA)n Simple_repeat Simple_repeat 2 57 0 1035 48 0 0 chr2 69624445 69624571 -183632012 + AluY SINE Alu 175 300 -11 26 30 0 0 chr2 69624742 69624775 -183631808 + AT_rich Low_complexity Low_complexity 1 33 0 848 259 69 46 chr2 69625569 69625917 -183630666 - LTR33A LTR ERVL -6 517 162 180 360 143 11 chr2 69626023 69626212 -183630371 - L2 LINE L2 -339 2975 2762 278 303 211 16 chr2 69626579 69626949 -183629634 - L2 LINE L2 -642 2672 2231 303 286 0 0 chr2 69627373 69627450 -183629133 - MER81 DNA DNA -37 77 1 1809 173 25 69 chr2 69628477 69628777 -183627806 + MLT1B LTR MaLR 5 284 -106 2376 116 36 33 chr2 69628777 69629138 -183627445 - THE1B LTR MaLR -2 362 1 1809 173 25 69 chr2 69629138 69629241 -183627342 + MLT1B LTR MaLR 284 390 0 2357 113 0 0 chr2 69629547 69629856 -183626727 - AluSc SINE Alu 0 309 1 2487 70 0 3 chr2 69630445 69630757 -183625826 + AluY SINE Alu 1 311 0 240 296 47 77 chr2 69630757 69630926 -183625657 + MIR SINE MIR 59 222 -40 3685 119 2 26 chr2 69631366 69631903 -183624680 + MER1A DNA MER1_type 6 529 0 2153 108 3 26 chr2 69631954 69632260 -183624323 - AluSx SINE Alu -11 301 3 353 221 12 23 chr2 69632554 69632640 -183623943 - L1MC5 LINE L1 -46 7915 7831 2089 129 0 10 chr2 69632670 69632973 -183623610 - AluSx SINE Alu -12 300 1 2934 211 78 40 chr2 69633170 69633380 -183623203 - L1MC3 LINE L1 0 8042 7842 2124 124 13 0 chr2 69633380 69633550 -183623033 - AluSg SINE Alu -8 302 125 378 0 0 0 chr2 69633550 69633592 -183622991 + (TTTTA)n Simple_repeat Simple_repeat 2 43 0 2124 124 13 0 chr2 69633592 69633719 -183622864 - AluSg SINE Alu -185 125 1 2934 211 78 40 chr2 69633719 69634343 -183622240 - L1MC3 LINE L1 -200 7842 7190 896 194 32 40 chr2 69634319 69634567 -183622016 - L1MC4 LINE L1 -871 7171 6926 * 21 0 0 0 chr2 69634677 69634698 -183621885 + AT_rich Low_complexity Low_complexity 1 21 0 249 380 23 8 chr2 69635517 69635646 -183620937 + MIR3 SINE MIR 10 140 -68 1082 205 27 145 chr2 69635651 69636020 -183620563 - MLT1A1 LTR MaLR 0 365 49 2219 108 3 25 chr2 69636020 69636336 -183620247 + AluSq SINE Alu 1 309 -4 1082 205 27 145 chr2 69636336 69636380 -183620203 - MLT1A1 LTR MaLR -316 49 1 449 289 242 5 chr2 69636523 69636734 -183619849 - MIR SINE MIR 0 262 2 511 108 0 0 chr2 69637026 69637100 -183619483 + L1PA10 LINE L1 6095 6168 0 361 43 0 0 chr2 69637135 69637182 -183619401 - MADE1 DNA Mariner 0 80 34 1158 259 46 64 chr2 69637343 69637588 -183618995 + MLT1J LTR MaLR 1 236 -275 1343 116 0 37 chr2 69637588 69637803 -183618780 - L1PA14 LINE L1 -1 6160 5954 1158 259 46 64 chr2 69637803 69638012 -183618571 + MLT1J LTR MaLR 236 447 -64 455 184 0 29 chr2 69638012 69638148 -183618435 + CT-rich Low_complexity Low_complexity 4 135 0 316 154 84 102 chr2 69639342 69639482 -183617101 - MIR3 SINE MIR 0 208 75 294 29 0 0 chr2 69640572 69640607 -183615976 + (TA)n Simple_repeat Simple_repeat 2 36 0 219 216 39 0 chr2 69641804 69641855 -183614728 + CT-rich Low_complexity Low_complexity 3 55 0 328 292 118 21 chr2 69643857 69644001 -183612582 + MIR3 SINE MIR 34 191 -17 807 181 0 36 chr2 69644101 69644239 -183612344 - FLAM_C SINE Alu 0 133 1 2957 9 0 0 chr2 69644249 69644567 -183612016 - AluYb8 SINE Alu 0 318 1 21 36 0 0 chr2 69645485 69645513 -183611070 + AT_rich Low_complexity Low_complexity 1 28 0 4510 135 7 17 chr2 69645606 69646325 -183610258 + MER50 LTR ERV1 1 712 -22 21 0 0 0 chr2 69646850 69646871 -183609712 + AT_rich Low_complexity Low_complexity 1 21 0 2055 141 0 20 chr2 69646986 69647292 -183609291 - AluSx SINE Alu -12 300 1 38545 86 11 7 chr2 69647972 69654085 -183602498 - L1PA6 LINE L1 -4 6150 11 22 80 0 0 chr2 69654398 69654448 -183602135 + AT_rich Low_complexity Low_complexity 1 50 0 237 283 22 29 chr2 69654521 69654659 -183601924 + L1P LINE L1 4876 5012 -1134 2211 166 28 10 chr2 69654752 69655421 -183601162 + L1MB7 LINE L1 4931 5612 -566 * 20575 34 1 83 chr2 69655419 69656752 -183599831 - L1PA5 LINE L1 -1 6153 4712 2859 196 20 7 chr2 69656752 69657311 -183599272 + L1MB7 LINE L1 5599 6165 -19 20575 34 1 83 chr2 69657311 69659728 -183596855 - L1PA5 LINE L1 -1442 4712 2714 * 26200 128 25 73 chr2 69659724 69664761 -183591822 - L1P LINE L1 -1343 4803 9 1350 82 82 20 chr2 69664773 69664968 -183591615 - L1PA13 LINE L1 -1 6162 5956 1759 173 0 40 chr2 69665018 69665342 -183591241 + AluJb SINE Alu 1 311 -1 41535 42 1 1 chr2 69665412 69671562 -183585021 - L1PA3 LINE L1 0 6155 6 516 311 51 34 chr2 69671757 69672050 -183584533 - MLT1J LTR MaLR 0 511 214 200 238 0 0 chr2 69672287 69672329 -183584254 + (TAA)n Simple_repeat Simple_repeat 2 43 0 260 306 156 5 chr2 69672330 69672516 -183584067 - MIR SINE MIR -1 261 48 285 254 0 0 chr2 69672537 69672600 -183583983 - MER81 DNA DNA -25 89 27 2852 13 0 0 chr2 69672747 69673058 -183583525 + AluYa5 SINE Alu 1 311 0 21 36 0 0 chr2 69673960 69673988 -183582595 + AT_rich Low_complexity Low_complexity 1 28 0 1086 182 51 5 chr2 69673996 69674210 -183582373 - MER58A DNA MER1_type 0 224 1 243 277 21 0 chr2 69674940 69675034 -183581549 + (TA)n Simple_repeat Simple_repeat 1 96 0 298 297 22 7 chr2 69675227 69675365 -183581218 - MARNA DNA Mariner -238 348 209 5008 94 4 12 chr2 69675387 69676188 -183580395 + L1P LINE L1 3001 3794 -2352 350 294 73 0 chr2 69676194 69676330 -183580253 - MARNA DNA Mariner -430 156 11 2231 119 0 0 chr2 69677387 69677699 -183578884 + AluSx SINE Alu 1 312 0 600 187 20 20 chr2 69677710 69677860 -183578723 + MER103 DNA DNA 7 156 -10 279 0 0 0 chr2 69677927 69677958 -183578625 + (CA)n Simple_repeat Simple_repeat 2 32 0 383 297 50 14 chr2 69678024 69678246 -183578337 - L1ME4a LINE L1 -253 5868 5639 2666 165 30 14 chr2 69679698 69680207 -183576376 - MER44D DNA MER2_type -6 599 211 792 242 48 24 chr2 69680239 69680491 -183576092 + MIR SINE MIR 2 259 -3 726 69 0 0 chr2 69680547 69680648 -183575935 + (TTCC)n Simple_repeat Simple_repeat 1 101 0 1429 186 58 28 chr2 69680650 69680941 -183575642 - AluJo SINE Alu -12 300 1 40854 44 11 0 chr2 69680975 69687070 -183569513 - L1PA4 LINE L1 0 6155 1 336 77 0 0 chr2 69687698 69687750 -183568833 + (CA)n Simple_repeat Simple_repeat 2 53 0 1149 223 196 9 chr2 69687967 69688407 -183568176 - Charlie1b DNA MER1_type 0 523 2 2174 270 45 10 chr2 69688487 69689172 -183567411 + HsTC2c DNA Tc2 8 716 -13 2045 197 37 24 chr2 69689205 69689666 -183566917 - MLT1C LTR MaLR 0 467 1 644 272 110 56 chr2 69689695 69690122 -183566461 + MLT1I LTR MaLR 1 409 0 3121 196 36 33 chr2 69690223 69690924 -183565659 + L1M4 LINE L1 3829 4526 -1620 185 65 32 0 chr2 69690924 69690955 -183565628 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 925 102 7 0 chr2 69690957 69691094 -183565489 - L1PA14 LINE L1 -7 6154 6017 3121 196 36 33 chr2 69691094 69691279 -183565304 + L1M4 LINE L1 4526 4721 -1425 21 36 0 0 chr2 69691334 69691362 -183565221 + AT_rich Low_complexity Low_complexity 1 28 0 958 275 36 42 chr2 69691368 69691728 -183564855 - MLT1I LTR MaLR 0 409 52 213 39 0 0 chr2 69693202 69693228 -183563355 + (TG)n Simple_repeat Simple_repeat 1 26 0 730 228 65 78 chr2 69693335 69693739 -183562844 - MLT1A2 LTR MaLR 0 390 1 186 244 0 0 chr2 69694431 69694472 -183562111 + L2 LINE L2 3272 3312 -1 1270 178 35 0 chr2 69694730 69695017 -183561566 + L1P LINE L1 4233 4529 -1617 17825 187 26 21 chr2 69695038 69700892 -183555691 - L1PA13 LINE L1 -891 5906 1 1023 218 59 28 chr2 69701013 69701259 -183555324 - L1ME2 LINE L1 -16 6148 5911 459 0 0 0 chr2 69701259 69701310 -183555273 + (TA)n Simple_repeat Simple_repeat 1 51 0 369 0 0 0 chr2 69701309 69701350 -183555233 + (TG)n Simple_repeat Simple_repeat 2 42 0 * 1023 218 59 28 chr2 69701310 69701471 -183555112 - L1ME2 LINE L1 -253 5911 5772 424 339 53 21 chr2 69702618 69702807 -183553776 + L1ME3A LINE L1 5762 5956 -214 29 70 0 0 chr2 69703008 69703065 -183553518 + AT_rich Low_complexity Low_complexity 1 57 0 22 0 0 0 chr2 69704341 69704363 -183552220 + AT_rich Low_complexity Low_complexity 1 22 0 447 206 9 75 chr2 69704866 69704973 -183551610 + FLAM_A SINE Alu 1 100 -42 474 351 25 8 chr2 69705503 69705741 -183550842 - MIR SINE MIR -14 248 10 701 273 47 29 chr2 69706672 69707016 -183549567 - L1MC4 LINE L1 0 8042 7693 1977 71 4 12 chr2 69708090 69708343 -183548240 - AluY SINE Alu -19 292 42 729 207 50 0 chr2 69708355 69708495 -183548088 - FRAM SINE Alu -24 152 6 342 200 74 104 chr2 69708995 69709130 -183547453 - L1ME3A LINE L1 -34 6136 6006 379 325 60 6 chr2 69712083 69712249 -183544334 + MIR3 SINE MIR 30 204 -4 201 310 95 0 chr2 69712554 69712670 -183543913 - MIR SINE MIR -2 260 134 455 286 106 23 chr2 69713097 69713314 -183543269 - MIR SINE MIR -8 254 20 450 323 30 53 chr2 69713922 69714188 -183542395 - L3b LINE CR1 -119 1464 1205 1021 177 17 0 chr2 69714201 69714382 -183542201 + MER5A DNA MER1_type 1 184 -5 200 195 0 0 chr2 69714481 69714522 -183542061 + (TATG)n Simple_repeat Simple_repeat 2 42 0 377 138 12 0 chr2 69715051 69715131 -183541452 - L1MA9 LINE L1 -7 6305 6225 299 320 20 0 chr2 69715255 69715355 -183541228 + L2 LINE L2 3212 3313 0 765 258 83 31 chr2 69716006 69716235 -183540348 - MIR SINE MIR -2 260 20 1594 188 3 17 chr2 69719247 69719540 -183537043 + AluJb SINE Alu 1 289 -23 533 281 105 24 chr2 69720920 69721319 -183535264 + LTR33A LTR ERVL 4 506 -17 181 214 0 29 chr2 69723398 69723468 -183533115 + CT-rich Low_complexity Low_complexity 1 68 0 2258 102 0 3 chr2 69724143 69724446 -183532137 - AluSx SINE Alu -8 304 3 27 29 0 0 chr2 69727076 69727110 -183529473 + AT_rich Low_complexity Low_complexity 1 34 0 22 35 0 0 chr2 69730674 69730703 -183525880 + AT_rich Low_complexity Low_complexity 1 29 0 219 139 0 0 chr2 69735146 69735182 -183521401 + (GAA)n Simple_repeat Simple_repeat 2 37 0 330 87 0 0 chr2 69738960 69739006 -183517577 + (TTTTC)n Simple_repeat Simple_repeat 5 50 0 23 0 0 0 chr2 69739074 69739097 -183517486 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 69739580 69739601 -183516982 + AT_rich Low_complexity Low_complexity 1 21 0 296 312 112 39 chr2 69742056 69742261 -183514322 - MIR SINE MIR -12 250 31 562 298 40 37 chr2 69742617 69742792 -183513791 + MIR SINE MIR 1 175 -62 320 407 50 29 chr2 69743081 69743361 -183513222 + L2 LINE L2 2905 3190 -82 650 289 64 10 chr2 69743795 69743999 -183512584 + MIR SINE MIR 1 215 -47 193 282 28 0 chr2 69744002 69744073 -183512510 + MIR SINE MIR 190 262 0 676 319 17 17 chr2 69744330 69744562 -183512021 + MIR SINE MIR 31 262 0 546 274 65 88 chr2 69744866 69745264 -183511319 - L1ME3A LINE L1 -219 5951 5563 1378 207 88 95 chr2 69745333 69745879 -183510704 + MLT1F LTR MaLR 1 542 0 246 269 140 27 chr2 69746195 69746381 -183510202 + L1ME4a LINE L1 5716 5922 -199 1309 157 0 27 chr2 69746757 69746980 -183509603 - Tigger3(Golem) DNA MER2_type -23 3006 2790 562 221 16 33 chr2 69747037 69747159 -183509424 - Tigger3(Golem) DNA MER2_type -2908 121 2 287 358 108 11 chr2 69747696 69747872 -183508711 + L2 LINE L2 3078 3270 -2 720 299 60 0 chr2 69748957 69749158 -183507425 + MIR SINE MIR 37 249 -13 1445 195 33 20 chr2 69749488 69749791 -183506792 - AluJo SINE Alu -5 307 1 614 357 49 29 chr2 69750631 69750981 -183505602 + L2 LINE L2 2915 3271 -1 425 281 16 65 chr2 69751385 69751570 -183505013 - MIR SINE MIR -16 246 71 310 314 48 0 chr2 69751608 69751713 -183504870 + L3 LINE CR1 1022 1131 -446 2460 70 0 3 chr2 69751817 69752118 -183504465 + AluY SINE Alu 1 300 -11 1489 190 108 6 chr2 69752563 69752905 -183503678 + MLT2C1 LTR ERVL 1 377 -20 261 197 0 0 chr2 69752916 69752977 -183503606 + (TA)n Simple_repeat Simple_repeat 2 62 0 309 179 0 0 chr2 69752997 69753053 -183503530 + MLT2C1 LTR ERVL 465 520 0 369 207 98 0 chr2 69754187 69754269 -183502314 + MER5A DNA MER1_type 100 189 0 351 44 0 0 chr2 69754373 69754418 -183502165 + (TG)n Simple_repeat Simple_repeat 2 46 0 185 280 108 0 chr2 69754698 69754791 -183501792 + MIR SINE MIR 18 120 -88 820 166 104 18 chr2 69756075 69756238 -183500345 - MER45A DNA AcHobo 0 178 2 7861 12 0 0 chr2 69756894 69758076 -183498507 - L1PA2 LINE L1 -5 6150 4969 2767 18 0 0 chr2 69758076 69758402 -183498181 + L1P LINE L1 2331 2656 -3490 698 222 0 0 chr2 69759200 69759326 -183497257 - FLAM_A SINE Alu -7 126 1 189 94 0 0 chr2 69759603 69759635 -183496948 + (TG)n Simple_repeat Simple_repeat 2 33 0 12435 120 82 1 chr2 69759742 69761662 -183494921 + Tigger1 DNA MER2_type 1 2076 -342 452 164 0 0 chr2 69761641 69761714 -183494869 + Tigger1 DNA MER2_type 2345 2417 -1 * 4411 165 35 29 chr2 69761717 69762577 -183494006 + MER6 DNA MER2_type 1 865 0 406 317 77 27 chr2 69763056 69763239 -183493344 + MIR SINE MIR 20 211 -51 212 263 40 0 chr2 69763804 69763880 -183492703 + CT-rich Low_complexity Low_complexity 2 80 0 342 107 0 0 chr2 69764041 69764097 -183492486 + (TG)n Simple_repeat Simple_repeat 2 57 0 330 341 101 23 chr2 69764511 69764728 -183491855 + MIR SINE MIR 15 248 -14 261 234 72 72 chr2 69764815 69765024 -183491559 - MLT1L LTR MaLR -37 578 370 188 231 0 0 chr2 69765659 69765698 -183490885 - MIR SINE MIR -115 93 55 1805 151 7 4 chr2 69765826 69766155 -183490428 + AluSx SINE Alu 3 332 0 303 275 8 33 chr2 69766275 69766395 -183490188 + L1MC/D LINE L1 5683 5799 -2009 399 41 0 0 chr2 69766496 69766545 -183490038 + (TG)n Simple_repeat Simple_repeat 2 50 0 336 355 97 7 chr2 69766710 69766865 -183489718 + MIR SINE MIR 19 187 -75 192 347 0 0 chr2 69767249 69767298 -183489285 - L2 LINE L2 -2 3270 3222 1197 210 55 13 chr2 69769342 69769550 -183487033 + MER33 DNA MER1_type 2 229 -2356 243 114 0 0 chr2 69769550 69769594 -183486989 + (TA)n Simple_repeat Simple_repeat 2 45 0 1197 210 55 13 chr2 69769594 69769695 -183486888 + MER33 DNA MER1_type 229 324 0 6414 122 20 5 chr2 69770414 69771511 -183485072 + L1MA5A LINE L1 5183 6297 0 23 33 0 0 chr2 69774271 69774301 -183482282 + AT_rich Low_complexity Low_complexity 1 30 0 30 27 0 0 chr2 69774710 69774747 -183481836 + AT_rich Low_complexity Low_complexity 1 37 0 251 204 23 91 chr2 69774806 69774857 -183481726 + L1MC5 LINE L1 7696 7749 -212 244 0 56 0 chr2 69774857 69774893 -183481690 + (TA)n Simple_repeat Simple_repeat 1 38 0 251 204 23 91 chr2 69774893 69774973 -183481610 + L1MC5 LINE L1 7749 7818 -143 402 315 25 25 chr2 69775267 69775464 -183481119 + LTR16C LTR ERVL 256 452 -39 2114 213 94 17 chr2 69775609 69776319 -183480264 - Charlie2 DNA MER1_type -242 2620 1856 442 200 160 0 chr2 69776320 69776445 -183480138 - Charlie2 DNA MER1_type -2540 322 178 4313 187 36 15 chr2 69776445 69777953 -183478630 - L1MB7 LINE L1 0 6184 4644 1041 53 26 7 chr2 69777969 69778121 -183478462 + (TTTC)n Simple_repeat Simple_repeat 2 156 0 2092 93 4 4 chr2 69778123 69778403 -183478180 - AluY SINE Alu -31 280 1 2489 123 45 19 chr2 69778424 69778848 -183477735 - Tigger2 DNA MER2_type 0 2718 2284 406 188 0 0 chr2 69778857 69778926 -183477657 - Tigger2 DNA MER2_type -2649 69 1 2656 202 48 119 chr2 69778926 69779984 -183476599 - L1MB7 LINE L1 -1603 4543 3561 23 86 0 0 chr2 69780105 69780163 -183476420 + AT_rich Low_complexity Low_complexity 1 58 0 565 221 45 39 chr2 69780202 69780356 -183476227 - L2 LINE L2 0 3313 3159 381 250 211 16 chr2 69780755 69780883 -183475700 - MER5A DNA MER1_type -28 161 9 222 91 0 0 chr2 69782150 69782183 -183474400 + (GA)n Simple_repeat Simple_repeat 2 34 0 464 287 67 43 chr2 69782277 69782486 -183474097 + MER115 DNA AcHobo 25 238 -455 2224 116 47 14 chr2 69783425 69783787 -183472796 + THE1C LTR MaLR 2 375 0 2130 113 0 23 chr2 69784308 69784608 -183471975 - AluSx SINE Alu -19 293 1 792 194 6 17 chr2 69785095 69785270 -183471313 - MER104 DNA MER2_type -3 177 5 303 260 104 0 chr2 69785274 69785351 -183471232 - MER103 DNA DNA -38 128 44 903 277 9 9 chr2 69786031 69786255 -183470328 + MER58A DNA MER1_type 1 224 0 1068 291 41 28 chr2 69787291 69787680 -183468903 + MLT1I LTR MaLR 16 409 0 21 0 0 0 chr2 69787696 69787717 -183468866 + AT_rich Low_complexity Low_complexity 1 21 0 1255 294 34 26 chr2 69789290 69789872 -183466711 - L1ME3 LINE L1 -214 5948 5362 243 170 0 21 chr2 69790172 69790219 -183466364 - LTR67 LTR ERVL -3 554 509 328 329 110 0 chr2 69791283 69791447 -183465136 - MIR SINE MIR -1 261 80 202 324 63 18 chr2 69792457 69792568 -183464015 + L2 LINE L2 3149 3264 -8 576 261 35 39 chr2 69792747 69792950 -183463633 + MIR SINE MIR 13 214 -48 25 65 0 0 chr2 69793243 69793289 -183463294 + AT_rich Low_complexity Low_complexity 1 46 0 339 219 15 109 chr2 69793310 69793447 -183463136 - MLT1H LTR MaLR -1 548 425 207 0 0 0 chr2 69794047 69794070 -183462513 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 315 281 18 26 chr2 69794563 69794677 -183461906 - MER5B DNA MER1_type -64 114 2 425 289 39 0 chr2 69794823 69794951 -183461632 - MIR SINE MIR -73 189 57 1188 213 0 0 chr2 69795231 69795438 -183461145 + Tigger3b DNA MER2_type 1 207 -1024 230 111 0 0 chr2 69795438 69795474 -183461109 + L1MA4 LINE L1 5368 5403 -768 6064 110 4 11 chr2 69795474 69797184 -183459399 + L1PA10 LINE L1 4459 6167 -1 4935 158 21 11 chr2 69797184 69798090 -183458493 + L1MA4 LINE L1 5385 6299 -1 22 0 0 0 chr2 69798099 69798121 -183458462 + AT_rich Low_complexity Low_complexity 1 22 0 339 253 0 0 chr2 69798131 69798210 -183458373 + L1MC4 LINE L1 7963 8041 -1 5383 137 53 19 chr2 69798314 69799314 -183457269 + Tigger3b DNA MER2_type 198 1231 0 278 324 15 44 chr2 69800220 69800356 -183456227 - MIR SINE MIR -70 192 61 233 172 8 157 chr2 69801033 69801167 -183455416 + Charlie7 DNA MER1_type 2433 2546 -66 242 311 0 0 chr2 69801173 69801263 -183455320 + L1MC4 LINE L1 6614 6703 -1339 225 333 0 0 chr2 69801223 69801313 -183455270 - L1MC4 LINE L1 -1339 6703 6614 * 234 281 98 0 chr2 69801273 69801355 -183455228 + L1MC4 LINE L1 6614 6703 -1339 221 327 0 0 chr2 69801356 69801411 -183455172 + (TATG)n Simple_repeat Simple_repeat 4 58 0 2006 189 22 66 chr2 69801498 69801786 -183454797 + MLT1C LTR MaLR 1 261 -206 2071 128 133 18 chr2 69801786 69802170 -183454413 + MSTA LTR MaLR 1 428 0 2006 189 22 66 chr2 69802170 69802369 -183454214 + MLT1C LTR MaLR 261 467 0 520 273 126 76 chr2 69803349 69803705 -183452878 - L2 LINE L2 -1 3312 2939 645 276 116 16 chr2 69803725 69803975 -183452608 - L2 LINE L2 -550 2764 2490 188 321 220 18 chr2 69804031 69804140 -183452443 + MIR SINE MIR 48 178 -84 465 19 0 0 chr2 69804273 69804327 -183452256 + (TCTA)n Simple_repeat Simple_repeat 2 55 0 275 371 109 36 chr2 69804768 69805097 -183451486 - L2 LINE L2 0 3272 2920 546 288 44 39 chr2 69805237 69805442 -183451141 + MIR SINE MIR 18 223 -39 26 30 0 0 chr2 69805671 69805704 -183450879 + AT_rich Low_complexity Low_complexity 1 33 0 417 118 12 71 chr2 69806047 69806132 -183450451 + MADE1 DNA Mariner 1 80 0 234 0 0 0 chr2 69806652 69806678 -183449905 + (CA)n Simple_repeat Simple_repeat 2 27 0 378 0 0 0 chr2 69807189 69807231 -183449352 + (TG)n Simple_repeat Simple_repeat 2 43 0 987 205 145 17 chr2 69808857 69809282 -183447301 + MLT1E1 LTR MaLR 75 619 -35 266 304 13 13 chr2 69809452 69809531 -183447052 - MLT1I LTR MaLR -85 324 246 227 354 13 0 chr2 69809577 69809656 -183446927 - MLT1J2 LTR MaLR -288 162 83 1359 67 0 0 chr2 69811858 69812037 -183444546 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 1014 142 0 0 chr2 69813411 69813630 -183442953 + (TA)n Simple_repeat Simple_repeat 1 219 0 300 280 43 11 chr2 69813630 69813723 -183442860 + L1MC4 LINE L1 6610 6705 -1337 * 340 281 22 0 chr2 69813693 69813782 -183442801 - L1MC4 LINE L1 -1339 6703 6613 340 281 22 0 chr2 69813783 69813872 -183442711 - L1MC4 LINE L1 -1339 6703 6613 301 316 0 11 chr2 69813810 69813905 -183442678 + L1MC4 LINE L1 6610 6703 -1339 * 312 303 22 0 chr2 69813903 69813992 -183442591 - L1MC4 LINE L1 -1339 6703 6613 335 221 8 0 chr2 69813992 69814114 -183442469 + (TA)n Simple_repeat Simple_repeat 2 124 0 323 242 38 49 chr2 69814432 69814554 -183442029 + MIR SINE MIR 33 152 -62 382 236 32 0 chr2 69814972 69815082 -183441501 + HsTC2 DNA Tc2 66 1898 0 28 29 0 0 chr2 69815292 69815327 -183441256 + AT_rich Low_complexity Low_complexity 1 35 0 1159 249 41 77 chr2 69815621 69816183 -183440400 - MER34 LTR ERV1 0 542 1 1906 131 24 110 chr2 69816201 69816582 -183440001 - MER7A DNA MER2_type 0 346 1 877 229 26 0 chr2 69817177 69817369 -183439214 + MER105 DNA DNA 1 197 -7 2264 159 54 7 chr2 69818225 69818634 -183437949 - MSTA LTR MaLR 0 428 1 2364 64 0 3 chr2 69821868 69822164 -183434419 - AluY SINE Alu -16 295 1 309 264 25 66 chr2 69822857 69822978 -183433605 - MIR SINE MIR -50 212 97 212 303 48 69 chr2 69823092 69823237 -183433346 - MIR3 SINE MIR -52 156 15 2505 160 124 19 chr2 69823269 69823800 -183432783 + L1MCa LINE L1 29 615 -5811 1573 157 34 0 chr2 69823804 69824097 -183432486 + L1MC1 LINE L1 6000 6302 -31 247 247 25 12 chr2 69824102 69824183 -183432400 + MER94 DNA DNA 53 134 0 358 337 105 35 chr2 69824923 69825095 -183431488 + MIR3 SINE MIR 22 205 -3 287 275 145 22 chr2 69825274 69825412 -183431171 - MIR3 SINE MIR -15 193 39 950 265 44 25 chr2 69825821 69826138 -183430445 - MLT1J1 LTR MaLR -123 323 1 3133 64 94 5 chr2 69826426 69826864 -183429719 - L1PA8 LINE L1 -10 6162 5686 2025 97 0 13 chr2 69827010 69827310 -183429273 - L1PA13 LINE L1 -1 6162 5867 742 273 101 46 chr2 69827629 69827955 -183428628 + L2 LINE L2 2968 3311 -2 1380 237 78 34 chr2 69828072 69828596 -183427987 - MLT1H LTR MaLR 0 549 3 186 133 0 0 chr2 69830467 69830497 -183426086 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 273 29 0 0 chr2 69831005 69831039 -183425544 + (CA)n Simple_repeat Simple_repeat 1 34 0 408 97 0 0 chr2 69832323 69832385 -183424198 + (TG)n Simple_repeat Simple_repeat 1 62 0 258 32 0 0 chr2 69833027 69833058 -183423525 + (TG)n Simple_repeat Simple_repeat 1 31 0 554 161 9 62 chr2 69833817 69833929 -183422654 + FLAM_A SINE Alu 1 106 -36 523 240 249 9 chr2 69834067 69834288 -183422295 - ORSL DNA AcHobo -1 274 1 306 0 0 0 chr2 69834364 69834398 -183422185 + (TTA)n Simple_repeat Simple_repeat 3 36 0 7485 28 0 0 chr2 69834398 69835308 -183421275 - L1PA3 LINE L1 -18 6137 5228 8992 29 0 0 chr2 69835308 69836424 -183420159 + L1PA3 LINE L1 4145 5260 -886 186 274 161 0 chr2 69836430 69836492 -183420091 + MIR SINE MIR 120 191 -71 671 205 36 44 chr2 69836836 69837085 -183419498 - L1MC5 LINE L1 -186 7775 7529 5369 93 23 57 chr2 69837380 69838300 -183418283 - L1PA12 LINE L1 0 6168 5280 325 160 20 100 chr2 69838640 69838704 -183417879 - MIR SINE MIR -47 215 160 1645 180 21 3 chr2 69838704 69838988 -183417595 + AluJb SINE Alu 1 289 -23 325 160 20 100 chr2 69838988 69839023 -183417560 - MIR SINE MIR -102 160 124 601 278 73 8 chr2 69839027 69839272 -183417311 - MIR SINE MIR 0 262 2 188 98 0 24 chr2 69840497 69840538 -183416045 + (CAAAAA)n Simple_repeat Simple_repeat 4 43 0 2414 69 0 0 chr2 69840705 69840994 -183415589 + AluY SINE Alu 3 291 -20 2437 76 3 0 chr2 69841724 69842025 -183414558 + AluSc SINE Alu 1 302 -7 189 0 0 0 chr2 69844281 69844302 -183412281 + (A)n Simple_repeat Simple_repeat 1 21 0 1494 218 56 36 chr2 69844907 69845353 -183411230 + MLT1C LTR MaLR 1 455 -12 2097 131 6 26 chr2 69845563 69845876 -183410707 + AluSx SINE Alu 1 307 -5 580 188 7 7 chr2 69845876 69846020 -183410563 + GA-rich Low_complexity Low_complexity 2 145 0 184 145 36 145 chr2 69848257 69848340 -183408243 - MIR3 SINE MIR -16 192 119 2034 299 56 11 chr2 69848846 69849886 -183406697 + L1M4 LINE L1 3225 4310 -1836 4058 166 48 26 chr2 69849909 69850793 -183405790 - L1MC3 LINE L1 -139 7646 6744 632 216 103 45 chr2 69850789 69851254 -183405329 + L1M4 LINE L1 4324 4850 -1296 * 361 274 94 55 chr2 69851269 69851470 -183405113 - L1MC4 LINE L1 -5 8037 7829 1831 237 42 24 chr2 69851513 69852108 -183404475 - L1ME2 LINE L1 -11 6153 5548 753 285 29 12 chr2 69852103 69852349 -183404234 - L1MDa LINE L1 -6289 251 2 * 23 0 0 0 chr2 69853011 69853034 -183403549 + AT_rich Low_complexity Low_complexity 1 23 0 2081 157 116 13 chr2 69853228 69853616 -183402967 + MSTA LTR MaLR 1 428 0 1747 122 7 0 chr2 69853618 69853896 -183402687 + MSTA-int LTR MaLR 3 282 -1298 248 204 56 0 chr2 69853896 69854004 -183402579 + (TA)n Simple_repeat Simple_repeat 1 114 0 24 53 0 0 chr2 69854018 69854056 -183402527 + AT_rich Low_complexity Low_complexity 1 38 0 339 284 7 54 chr2 69854072 69854220 -183402363 - L1ME2 LINE L1 -2408 5400 5260 475 296 6 24 chr2 69854478 69854647 -183401936 + Charlie8 DNA MER1_type 85 250 -2167 264 250 16 0 chr2 69854850 69854914 -183401669 + Charlie8 DNA MER1_type 1349 1413 -1004 1043 95 0 0 chr2 69855128 69855276 -183401307 - L1MA1 LINE L1 -1 6301 6154 27 0 0 0 chr2 69856056 69856083 -183400500 + AT_rich Low_complexity Low_complexity 1 27 0 182 232 116 43 chr2 69856457 69856526 -183400057 + MER5B DNA MER1_type 28 101 -77 642 239 181 13 chr2 69857593 69857831 -183398752 - LTR50 LTR ERVL -497 298 21 2089 112 16 16 chr2 69857849 69858172 -183398411 - L1PA15 LINE L1 -6 6159 5837 264 59 0 0 chr2 69858209 69858243 -183398340 + (A)n Simple_repeat Simple_repeat 1 34 0 231 133 0 0 chr2 69858444 69858489 -183398094 + (TTTTG)n Simple_repeat Simple_repeat 3 47 0 2058 112 3 23 chr2 69859842 69860147 -183396436 - AluSc SINE Alu -10 299 1 232 365 169 23 chr2 69860968 69861275 -183395308 + L2 LINE L2 2486 2837 -477 257 157 9 148 chr2 69861286 69861401 -183395182 + L1MA9 LINE L1 6174 6272 -40 590 296 56 34 chr2 69861957 69862190 -183394393 - MIR SINE MIR -13 249 12 734 78 9 0 chr2 69862332 69862447 -183394136 + (TCTA)n Simple_repeat Simple_repeat 4 119 0 566 260 82 48 chr2 69863015 69863246 -183393337 - MIR SINE MIR -8 254 16 596 238 55 29 chr2 69864413 69864629 -183391954 - MIR SINE MIR -16 246 24 260 311 121 23 chr2 69864911 69865043 -183391540 - MIR SINE MIR -70 192 48 249 304 0 0 chr2 69865158 69865237 -183391346 + CT-rich Low_complexity Low_complexity 2 80 0 2136 105 34 3 chr2 69865429 69865725 -183390858 + AluSg SINE Alu 1 305 -5 26 0 0 0 chr2 69865942 69865968 -183390615 + AT_rich Low_complexity Low_complexity 1 26 0 641 271 27 44 chr2 69866559 69866784 -183389799 - MER58A DNA MER1_type -3 221 1 335 220 155 18 chr2 69868145 69868313 -183388270 + MLT1K LTR MaLR 381 571 -17 388 317 135 10 chr2 69868777 69868985 -183387598 - MIR SINE MIR -6 256 23 456 265 85 81 chr2 69869748 69869883 -183386700 + MIR SINE MIR 13 151 -111 1887 128 49 35 chr2 69869883 69870251 -183386332 + THE1C LTR MaLR 3 375 0 456 265 85 81 chr2 69870251 69870338 -183386245 + MIR SINE MIR 151 236 -26 198 0 0 0 chr2 69870778 69870800 -183385783 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 406 273 85 30 chr2 69871834 69871999 -183384584 + MIR SINE MIR 45 218 -44 500 340 16 5 chr2 69872069 69872257 -183384326 - MIR3 SINE MIR 0 208 19 362 261 239 0 chr2 69872591 69872729 -183383854 + MIR SINE MIR 86 256 -6 181 284 20 0 chr2 69875017 69875119 -183381464 + GA-rich Low_complexity Low_complexity 2 105 0 629 239 57 6 chr2 69875175 69875351 -183381232 + MIR SINE MIR 63 247 -15 2936 121 41 19 chr2 69875516 69876030 -183380553 - L1MA3 LINE L1 0 6305 5781 188 350 50 50 chr2 69876196 69876356 -183380227 - MIR SINE MIR -4 258 99 419 226 20 181 chr2 69876946 69877041 -183379542 + L2 LINE L2 2966 3075 -238 1864 191 0 0 chr2 69877041 69877340 -183379243 - AluJb SINE Alu -13 299 1 419 226 20 181 chr2 69877340 69877652 -183378931 + L2 LINE L2 3075 3307 -6 515 281 111 7 chr2 69879215 69879368 -183377215 + MIR SINE MIR 32 200 -62 180 0 0 0 chr2 69881779 69881799 -183374784 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 192 77 0 0 chr2 69882579 69882605 -183373978 + (A)n Simple_repeat Simple_repeat 1 26 0 22 56 0 0 chr2 69883337 69883373 -183373210 + AT_rich Low_complexity Low_complexity 1 36 0 475 262 16 0 chr2 69885262 69885384 -183371199 - MIR SINE MIR -8 254 131 1530 188 46 11 chr2 69886139 69886421 -183370162 - AluJo SINE Alu -15 297 6 1040 182 34 19 chr2 69886423 69886692 -183369891 - MER33 DNA MER1_type -41 283 11 396 271 160 44 chr2 69886727 69886908 -183369675 + MIR SINE MIR 48 249 -13 621 163 181 6 chr2 69887122 69887282 -183369301 + MER20 DNA MER1_type 29 216 -3 753 272 58 0 chr2 69889650 69889856 -183366727 - MIR SINE MIR -14 248 31 376 347 20 7 chr2 69890834 69890984 -183365599 + MIR3 SINE MIR 14 165 -43 236 118 0 0 chr2 69892556 69892590 -183363993 - U2 snRNA snRNA -153 35 2 20965 103 9 14 chr2 69893594 69897304 -183359279 - L1P3 LINE L1 -2005 4456 748 235 257 0 54 chr2 69897305 69897379 -183359204 - MIR SINE MIR -115 147 78 801 186 0 18 chr2 69897588 69897755 -183358828 - MER3 DNA MER1_type -5 204 41 241 333 178 0 chr2 69898045 69898180 -183358403 - MIR SINE MIR -50 212 54 202 293 0 0 chr2 69898320 69898361 -183358222 - L2 LINE L2 -89 3183 3143 294 240 53 13 chr2 69898420 69898495 -183358088 + L2 LINE L2 3222 3299 -14 624 217 118 0 chr2 69899245 69899397 -183357186 - FRAM SINE Alu -9 167 1 250 243 9 103 chr2 69899679 69899786 -183356797 + L2 LINE L2 2590 2686 -628 257 0 30 0 chr2 69900183 69900216 -183356367 + (TTAA)n Simple_repeat Simple_repeat 1 34 0 210 305 67 99 chr2 69900236 69900459 -183356124 - L2 LINE L2 -32 3240 3025 2295 66 0 27 chr2 69900530 69900831 -183355752 - AluY SINE Alu -18 293 1 24 0 0 0 chr2 69900840 69900864 -183355719 + AT_rich Low_complexity Low_complexity 1 24 0 583 300 61 36 chr2 69902342 69902589 -183353994 + MIR SINE MIR 10 262 0 435 306 136 27 chr2 69902728 69902986 -183353597 + L3 LINE CR1 1008 1293 -284 724 236 20 44 chr2 69902990 69903193 -183353390 - MER20 DNA MER1_type 0 219 22 460 314 83 42 chr2 69903235 69903499 -183353084 + L3 LINE CR1 1284 1558 -19 1042 252 68 7 chr2 69904610 69904904 -183351679 - MLT1I LTR MaLR 0 409 98 209 239 0 33 chr2 69906811 69906903 -183349680 + GA-rich Low_complexity Low_complexity 3 91 0 887 300 89 32 chr2 69908113 69908621 -183347962 - L2 LINE L2 -56 3257 2724 365 335 86 43 chr2 69908702 69909192 -183347391 - L2 LINE L2 -101 3171 2673 446 327 25 6 chr2 69909218 69909377 -183347206 + MIR SINE MIR 28 189 -73 2234 119 0 0 chr2 69909393 69909687 -183346896 + AluSx SINE Alu 1 294 -18 699 104 0 0 chr2 69914583 69914689 -183341894 + (TTCC)n Simple_repeat Simple_repeat 2 107 0 22 80 0 0 chr2 69915266 69915316 -183341267 + AT_rich Low_complexity Low_complexity 1 50 0 974 58 0 0 chr2 69916101 69916221 -183340362 - AluY SINE Alu -15 296 177 389 254 46 15 chr2 69916223 69916353 -183340230 - L1ME LINE L1 -456 5665 5532 301 280 101 42 chr2 69916904 69917093 -183339490 - L1ME LINE L1 -1962 4184 3985 363 23 0 0 chr2 69917452 69917496 -183339087 + (TG)n Simple_repeat Simple_repeat 2 45 0 1734 234 117 34 chr2 69917503 69918186 -183338397 - L1ME2 LINE L1 -15 6149 5410 2421 103 14 0 chr2 69918211 69918562 -183338021 + MER1A DNA MER1_type 174 529 0 730 188 35 12 chr2 69918562 69918791 -183337792 - L1ME2 LINE L1 -747 5417 5186 439 329 27 0 chr2 69919084 69919233 -183337350 + LTR16A LTR ERVL 16 168 -282 33 0 0 0 chr2 69919677 69919710 -183336873 + AT_rich Low_complexity Low_complexity 1 33 0 23 54 0 0 chr2 69920123 69920160 -183336423 + AT_rich Low_complexity Low_complexity 1 37 0 1263 177 229 0 chr2 69920637 69920908 -183335675 - MER7A DNA MER2_type -14 332 2 310 153 66 15 chr2 69920989 69921126 -183335457 + (TA)n Simple_repeat Simple_repeat 2 145 0 26 30 0 0 chr2 69921230 69921263 -183335320 + AT_rich Low_complexity Low_complexity 1 33 0 5155 154 102 11 chr2 69921307 69923294 -183333289 - L1MA7 LINE L1 -6 6285 4104 1668 51 4 68 chr2 69923305 69923542 -183333041 - AluY SINE Alu -11 300 79 213 285 252 0 chr2 69925321 69925444 -183331139 + MIR SINE MIR 49 202 -60 228 67 0 0 chr2 69926137 69926167 -183330416 + (CAG)n Simple_repeat Simple_repeat 1 30 0 1189 98 0 18 chr2 69926291 69926476 -183330107 + AluSq SINE Alu 124 305 0 722 189 16 52 chr2 69928323 69928514 -183328069 + MER53 DNA DNA 6 189 0 325 212 10 81 chr2 69929074 69929173 -183327410 + L1MB8 LINE L1 5918 6009 -169 649 201 35 0 chr2 69929193 69929337 -183327246 + L1MA10 LINE L1 6176 6324 -10 204 277 71 89 chr2 69929444 69929556 -183327027 + L2 LINE L2 3200 3309 -4 641 270 122 72 chr2 69929631 69930105 -183326478 - MLT1J LTR MaLR -13 498 1 27 29 0 0 chr2 69931199 69931233 -183325350 + AT_rich Low_complexity Low_complexity 1 34 0 508 268 33 13 chr2 69931562 69931827 -183324756 + MER20B DNA MER1_type 1 316 -467 397 245 240 5 chr2 69932000 69932192 -183324391 + MER20B DNA MER1_type 546 782 -1 323 121 0 52 chr2 69932193 69932251 -183324332 - MER20B DNA MER1_type -1 218 164 33 0 0 0 chr2 69932262 69932295 -183324288 + AT_rich Low_complexity Low_complexity 1 33 0 1947 110 66 0 chr2 69932295 69932612 -183323971 - L1MA6 LINE L1 0 6300 5963 850 204 0 58 chr2 69932616 69932807 -183323776 - MER20B DNA MER1_type -39 180 1 487 285 47 17 chr2 69933012 69933184 -183323399 + MIR3 SINE MIR 24 200 -8 380 268 188 1 chr2 69933973 69934146 -183322437 - MIR SINE MIR -60 202 2 212 265 44 0 chr2 69935077 69935145 -183321438 - L2 LINE L2 -6 3266 3196 351 326 54 89 chr2 69935263 69935748 -183320835 - L2 LINE L2 -1 3271 2804 186 324 59 0 chr2 69987967 69988035 -183268548 - MIR SINE MIR -116 92 21 218 310 58 0 chr2 69990237 69990324 -183266259 + MIR3 SINE MIR 108 199 -9 329 278 28 19 chr2 69992881 69992989 -183263594 + MER81 DNA DNA 5 113 -1 1773 107 70 0 chr2 69993015 69993257 -183263326 - AluSx SINE Alu -37 275 17 307 335 80 44 chr2 69993307 69993558 -183263025 + L2 LINE L2 1815 2074 -1240 1779 142 14 28 chr2 69994174 69994463 -183262120 - AluSx SINE Alu -1 311 27 330 282 57 24 chr2 69994918 69995042 -183261541 - MIR SINE MIR -114 148 21 202 170 21 43 chr2 69995131 69995178 -183261405 + L2 LINE L2 3226 3271 -1 3005 211 59 31 chr2 69995225 69996693 -183259890 - L1ME1 LINE L1 -5 6161 4656 22126 29 0 0 chr2 69996712 70000159 -183256424 - L1PA4 LINE L1 -3 6152 2707 474 195 0 0 chr2 70000287 70000374 -183256209 - L1ME1 LINE L1 -1989 4157 4071 375 60 0 0 chr2 70000977 70001027 -183255556 + (CA)n Simple_repeat Simple_repeat 1 50 0 457 269 21 14 chr2 70001596 70001737 -183254846 - L2 LINE L2 -609 2705 2564 258 32 0 0 chr2 70001764 70001795 -183254788 + (TC)n Simple_repeat Simple_repeat 2 32 0 396 280 8 8 chr2 70001795 70001920 -183254663 + HsTC2 DNA Tc2 29 153 -1745 256 190 17 0 chr2 70001938 70001996 -183254587 - HsTC2 DNA Tc2 -1189 709 651 873 238 82 12 chr2 70002004 70002344 -183254239 + HsTC2 DNA Tc2 1533 1896 -2 1020 229 73 41 chr2 70002349 70002533 -183254050 - L2 LINE L2 -804 2510 2309 1585 193 60 58 chr2 70002533 70002999 -183253584 - MLT1C LTR MaLR 0 467 1 1020 229 73 41 chr2 70002999 70003154 -183253429 - L2 LINE L2 -1005 2309 2160 193 339 42 71 chr2 70003577 70003745 -183252838 - MIR3 SINE MIR -25 183 21 231 88 0 0 chr2 70004259 70004293 -183252290 + (TC)n Simple_repeat Simple_repeat 1 34 0 312 27 0 0 chr2 70004293 70004330 -183252253 + (TG)n Simple_repeat Simple_repeat 2 38 0 459 319 51 32 chr2 70004394 70004610 -183251973 + MIR SINE MIR 31 250 -12 1795 130 11 8 chr2 70005413 70005675 -183250908 + AluSx SINE Alu 44 306 -6 197 214 67 56 chr2 70005909 70005998 -183250585 + L3 LINE CR1 807 896 -681 2027 147 126 8 chr2 70006848 70007229 -183249354 + MSTA LTR MaLR 3 428 0 286 137 0 20 chr2 70008237 70008288 -183248295 + MIR SINE MIR 83 132 -76 407 264 54 0 chr2 70009695 70009824 -183246759 - MIR SINE MIR -3 259 124 370 301 27 14 chr2 70010077 70010223 -183246360 + (TATG)n Simple_repeat Simple_repeat 1 148 0 196 327 87 0 chr2 70011259 70011363 -183245220 - MIR SINE MIR -50 212 100 402 276 94 8 chr2 70011639 70011766 -183244817 - L2 LINE L2 -5 3308 3171 338 271 9 19 chr2 70011805 70011912 -183244671 - MLT1E LTR MaLR -474 119 14 835 246 136 35 chr2 70014242 70014731 -183241852 + MLT1E LTR MaLR 11 567 0 1568 180 0 82 chr2 70015898 70016238 -183240345 - AluJb SINE Alu 0 315 1 219 323 60 72 chr2 70017017 70017184 -183239399 + L2 LINE L2 2872 3036 -277 213 381 0 12 chr2 70017234 70017318 -183239265 + MIR SINE MIR 43 125 -137 583 270 59 7 chr2 70018102 70018254 -183238329 - MER5B DNA MER1_type -17 161 2 614 309 55 99 chr2 70020471 70020563 -183236020 - L2 LINE L2 -2 3270 3175 1823 155 4 11 chr2 70020563 70020840 -183235743 + AluSx SINE Alu 1 275 -37 441 0 0 0 chr2 70020843 70020892 -183235691 + (TAAAA)n Simple_repeat Simple_repeat 1 49 0 614 309 55 99 chr2 70020892 70021655 -183234928 - L2 LINE L2 -99 3173 2440 286 293 80 48 chr2 70022046 70022234 -183234349 + L2 LINE L2 3110 3303 -10 181 306 0 0 chr2 70022339 70022388 -183234195 + L2 LINE L2 3265 3313 0 404 214 113 88 chr2 70024668 70024753 -183231830 + MIR SINE MIR 59 151 -111 1974 162 17 11 chr2 70024753 70025105 -183231478 + THE1A LTR MaLR 2 355 0 404 214 113 88 chr2 70025105 70025178 -183231405 + MIR SINE MIR 151 221 -41 335 299 160 1 chr2 70025234 70025398 -183231185 + MIR3 SINE MIR 2 194 -14 246 305 0 0 chr2 70026233 70026292 -183230291 - L2 LINE L2 -4 3268 3210 298 282 12 12 chr2 70027187 70027272 -183229311 - L2 LINE L2 0 3272 3188 510 320 64 5 chr2 70027500 70027716 -183228867 + MIR SINE MIR 17 247 -15 202 342 25 0 chr2 70028221 70028300 -183228283 + MIR SINE MIR 161 241 -21 37 39 0 0 chr2 70029886 70029937 -183226646 + AT_rich Low_complexity Low_complexity 1 51 0 253 200 129 0 chr2 70030007 70030077 -183226506 + MIR SINE MIR 79 157 -105 1288 171 7 33 chr2 70030546 70030820 -183225763 + L1MB3 LINE L1 5909 6175 -8 221 250 0 0 chr2 70033105 70033153 -183223430 + MIR3 SINE MIR 131 178 -30 674 280 33 28 chr2 70033357 70033571 -183223012 + MIR SINE MIR 45 259 -3 252 363 44 0 chr2 70033856 70033969 -183222614 - MIR SINE MIR -66 196 79 256 229 73 73 chr2 70034572 70034681 -183221902 - MIR SINE MIR -6 256 148 344 286 45 15 chr2 70034847 70034980 -183221603 + Charlie8 DNA MER1_type 142 278 -2139 297 290 131 0 chr2 70035271 70035378 -183221205 - L2 LINE L2 -9 3263 3143 641 154 8 0 chr2 70035545 70035662 -183220921 - L1MB4 LINE L1 -1 6179 6062 31 26 0 0 chr2 70036184 70036222 -183220361 + AT_rich Low_complexity Low_complexity 1 38 0 320 299 37 22 chr2 70036240 70036374 -183220209 - MIR SINE MIR 0 262 127 876 115 178 6 chr2 70036381 70036538 -183220045 - MSTA LTR MaLR -244 184 1 887 165 38 0 chr2 70036563 70036721 -183219862 - MER58B DNA MER1_type -1 340 177 191 326 111 35 chr2 70036868 70037012 -183219571 - MIR SINE MIR -71 191 37 348 316 60 80 chr2 70037148 70037550 -183219033 - L2 LINE L2 0 3313 2920 421 306 98 40 chr2 70037772 70038099 -183218484 - L2 LINE L2 -738 2576 2231 275 219 14 55 chr2 70038990 70039063 -183217520 + L2 LINE L2 3244 3313 0 203 326 117 51 chr2 70039591 70039864 -183216719 - L2 LINE L2 -110 3162 2872 203 281 93 36 chr2 70041129 70041268 -183215315 + MER5B DNA MER1_type 18 164 -14 380 308 17 8 chr2 70041132 70041252 -183215331 - MER5A DNA MER1_type -22 167 47 303 312 28 28 chr2 70041409 70041550 -183215033 - L1M4 LINE L1 -3317 2829 2689 22 35 0 0 chr2 70041748 70041777 -183214806 + AT_rich Low_complexity Low_complexity 1 29 0 302 341 44 0 chr2 70041928 70042019 -183214564 + MIR SINE MIR 18 112 -150 21 0 0 0 chr2 70043062 70043083 -183213500 + AT_rich Low_complexity Low_complexity 1 21 0 202 298 202 0 chr2 70043465 70043549 -183213034 - MIR SINE MIR -161 101 1 21 0 0 0 chr2 70043589 70043610 -183212973 + AT_rich Low_complexity Low_complexity 1 21 0 227 232 14 29 chr2 70043990 70044059 -183212524 + MIR SINE MIR 98 165 -97 385 288 39 39 chr2 70044184 70044337 -183212246 - MIR3 SINE MIR -13 195 43 2396 68 3 3 chr2 70044560 70044868 -183211715 + AluY SINE Alu 1 308 -3 203 152 0 0 chr2 70047056 70047089 -183209494 - L2 LINE L2 0 3313 3281 24 0 0 0 chr2 70048348 70048372 -183208211 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr2 70050455 70050478 -183206105 + AT_rich Low_complexity Low_complexity 1 23 0 800 159 65 0 chr2 70050489 70050659 -183205924 - L1MB4 LINE L1 -5 6175 5995 22 56 0 0 chr2 70054891 70054927 -183201656 + AT_rich Low_complexity Low_complexity 1 36 0 195 209 0 47 chr2 70055182 70055225 -183201358 + MIR SINE MIR 217 257 -5 187 330 44 11 chr2 70055520 70055611 -183200972 + L2 LINE L2 3180 3273 -40 983 210 152 39 chr2 70055613 70055922 -183200661 - MER2 DNA MER2_type 0 344 1 196 359 78 23 chr2 70056163 70056291 -183200292 + MIR3 SINE MIR 6 140 -68 789 244 30 76 chr2 70056723 70057003 -183199580 - MIR SINE MIR 0 262 2 549 282 79 10 chr2 70058220 70058422 -183198161 + MIR SINE MIR 13 228 -34 192 162 29 15 chr2 70059186 70059254 -183197329 + (TA)n Simple_repeat Simple_repeat 1 69 0 254 202 0 101 chr2 70059266 70059365 -183197218 - L1MC4 LINE L1 -1340 6702 6614 244 250 0 0 chr2 70059299 70059379 -183197204 + L1MC4 LINE L1 6624 6703 -1339 * 229 171 14 43 chr2 70059348 70059418 -183197165 + L1MCa LINE L1 2006 2073 -4353 * 212 200 17 0 chr2 70059974 70060034 -183196549 + (TA)n Simple_repeat Simple_repeat 1 61 0 276 339 25 20 chr2 70060311 70060556 -183196027 + L1MC4a LINE L1 4357 4602 -1544 256 344 54 11 chr2 70060645 70060924 -183195659 + L1MC4a LINE L1 4723 5013 -1133 1304 196 89 16 chr2 70061080 70061452 -183195131 + L1MB5 LINE L1 4399 4797 -1349 5422 148 28 14 chr2 70061698 70063079 -183193504 - L1MA5A LINE L1 -3 6294 4770 1720 175 129 21 chr2 70063094 70064100 -183192483 + L1MB5 LINE L1 4848 6135 -39 198 0 0 0 chr2 70064378 70064400 -183192183 + (TAA)n Simple_repeat Simple_repeat 1 22 0 416 170 125 0 chr2 70064403 70064515 -183192068 + L1MC3 LINE L1 7658 7783 -2 1736 262 67 28 chr2 70064610 70065286 -183191297 + L1MC4a LINE L1 5273 5974 -1834 251 315 14 0 chr2 70065747 70065820 -183190763 + L2 LINE L2 3240 3313 0 800 161 0 0 chr2 70066022 70066152 -183190431 - FLAM_C SINE Alu -3 130 1 6754 74 12 5 chr2 70066547 70067725 -183188858 + L1PA8 LINE L1 4972 6152 -20 2276 97 0 0 chr2 70068824 70069122 -183187461 - AluSq SINE Alu -15 298 1 201 291 89 38 chr2 70069519 70069598 -183186985 - L2 LINE L2 0 3272 3190 1232 230 116 45 chr2 70070606 70071028 -183185555 - MLT1C LTR MaLR 0 467 16 2074 138 0 3 chr2 70071794 70072090 -183184493 + AluSx SINE Alu 6 300 -12 748 278 6 0 chr2 70072144 70072313 -183184270 - MER58A DNA MER1_type -48 176 7 527 281 140 18 chr2 70072952 70073173 -183183410 + MIR SINE MIR 5 252 -10 204 125 0 0 chr2 70073179 70073211 -183183372 + (CAT)n Simple_repeat Simple_repeat 2 33 0 374 277 12 0 chr2 70073268 70073351 -183183232 - L2 LINE L2 -23 3290 3207 424 231 68 8 chr2 70073366 70073483 -183183100 - L2 LINE L2 0 3313 3190 260 326 53 45 chr2 70073495 70073627 -183182956 + L2 LINE L2 3140 3272 0 342 0 0 0 chr2 70074835 70074873 -183181710 + (TG)n Simple_repeat Simple_repeat 1 38 0 2292 114 0 0 chr2 70076844 70077151 -183179432 - AluSq SINE Alu -6 307 1 535 285 94 55 chr2 70077387 70077622 -183178961 - MIR SINE MIR -6 256 13 22 0 0 0 chr2 70078580 70078602 -183177981 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr2 70080003 70080032 -183176551 + AT_rich Low_complexity Low_complexity 1 29 0 445 246 45 0 chr2 70080208 70080318 -183176265 + MIR3 SINE MIR 88 202 -6 519 261 97 74 chr2 70080489 70080788 -183175795 - MLT1J LTR MaLR -203 308 3 429 240 16 16 chr2 70081839 70081964 -183174619 - LTR67 LTR ERVL -2 555 431 320 325 179 0 chr2 70082303 70082454 -183174129 - MER5A DNA MER1_type -3 186 9 2501 211 76 38 chr2 70082534 70083274 -183173309 - L1ME2 LINE L1 -8 6156 5389 342 358 61 6 chr2 70084572 70084737 -183171846 + MIR3 SINE MIR 8 181 -27 389 274 8 48 chr2 70084845 70084969 -183171614 - MIR SINE MIR -70 192 74 7280 175 21 8 chr2 70085206 70086933 -183169650 - L1PA16 LINE L1 -15 6151 4383 404 19 19 0 chr2 70086933 70086986 -183169597 + (TG)n Simple_repeat Simple_repeat 2 55 0 7280 175 21 8 chr2 70086986 70087593 -183168990 - L1PA16 LINE L1 -1783 4383 3785 1359 229 9 3 chr2 70087591 70087914 -183168669 + L1PA16 LINE L1 3449 3773 -2373 * 508 268 88 5 chr2 70088351 70088545 -183168038 + L2 LINE L2 3104 3313 0 636 279 93 22 chr2 70088965 70089191 -183167392 + MIR SINE MIR 21 262 0 240 241 48 12 chr2 70090802 70090885 -183165698 - MLT1H LTR MaLR -16 579 494 390 317 114 42 chr2 70090958 70091220 -183165363 - MLT1H LTR MaLR -237 312 32 397 323 108 23 chr2 70091559 70091958 -183164625 - L1ME4a LINE L1 -4 6117 5685 392 317 17 0 chr2 70093465 70093585 -183162998 + L2 LINE L2 3192 3313 0 361 194 33 9 chr2 70093686 70093911 -183162672 + GA-rich Low_complexity Low_complexity 1 230 0 312 91 0 0 chr2 70095569 70095613 -183160970 + (A)n Simple_repeat Simple_repeat 1 44 0 2061 143 0 22 chr2 70097201 70097516 -183159067 + AluSx SINE Alu 1 308 -4 21 0 0 0 chr2 70097591 70097612 -183158971 + AT_rich Low_complexity Low_complexity 1 21 0 509 259 58 91 chr2 70097683 70097957 -183158626 + MLT1I LTR MaLR 80 331 -78 1869 115 52 71 chr2 70097957 70098339 -183158244 - THE1C LTR MaLR 0 375 1 509 259 58 91 chr2 70098339 70098415 -183158168 + MLT1I LTR MaLR 331 408 -1 765 200 7 39 chr2 70099801 70100000 -183156583 - FRAM SINE Alu 0 189 1 361 109 0 0 chr2 70101612 70101667 -183154916 - MLT2A2 LTR ERVL 0 520 466 193 229 14 14 chr2 70101678 70101748 -183154835 + (TA)n Simple_repeat Simple_repeat 2 71 0 2934 102 30 0 chr2 70101754 70102155 -183154428 - MLT2A2 LTR ERVL -40 413 1 816 249 57 5 chr2 70102206 70102415 -183154168 - MIR SINE MIR -21 241 22 2259 66 0 75 chr2 70102828 70103148 -183153435 + AluY SINE Alu 1 296 -15 1885 150 142 16 chr2 70104741 70105121 -183151462 - MSTA LTR MaLR 0 428 1 2056 256 46 4 chr2 70105678 70106398 -183150185 - Zaphod DNA AcHobo 0 4031 3282 333 0 0 0 chr2 70106440 70106477 -183150106 + (CA)n Simple_repeat Simple_repeat 2 38 0 16571 204 24 18 chr2 70106762 70112214 -183144369 + L1PA15 LINE L1 1229 6728 -88 725 300 38 8 chr2 70112215 70112455 -183144128 - Zaphod DNA AcHobo -3743 288 42 260 230 40 30 chr2 70112593 70112693 -183143890 + CT-rich Low_complexity Low_complexity 3 103 0 5161 43 0 3 chr2 70112752 70113382 -183143201 + L1PA5 LINE L1 5527 6154 0 523 267 115 10 chr2 70113666 70113954 -183142629 - L1ME LINE L1 -303 5818 5501 350 325 68 29 chr2 70114021 70114227 -183142356 - L1ME LINE L1 -2317 5468 5255 2249 114 0 0 chr2 70114238 70114536 -183142047 + AluSq SINE Alu 1 298 -15 454 301 65 83 chr2 70114959 70115574 -183141009 - L1ME LINE L1 -1300 4846 4243 30 59 0 0 chr2 70115583 70115634 -183140949 + AT_rich Low_complexity Low_complexity 1 51 0 681 208 132 45 chr2 70115888 70116150 -183140433 - L1ME2 LINE L1 -17 6149 5866 3597 237 55 60 chr2 70116165 70117437 -183139146 - L1ME2 LINE L1 -747 5399 4104 240 121 0 0 chr2 70117437 70117470 -183139113 - U2 snRNA snRNA -155 33 1 3597 237 55 60 chr2 70117470 70117738 -183138845 - L1ME2 LINE L1 -2042 4104 3836 397 320 59 20 chr2 70117880 70118083 -183138500 - L1ME LINE L1 -2178 3968 3758 648 301 169 27 chr2 70118124 70118983 -183137600 - L1ME LINE L1 -2467 3679 2676 1155 283 87 77 chr2 70119338 70120279 -183136304 - L2 LINE L2 -569 2745 1795 550 217 103 107 chr2 70122385 70122638 -183133945 - MIR SINE MIR -10 252 1 422 250 46 83 chr2 70125212 70125259 -183131324 + L2 LINE L2 3105 3152 -161 2168 107 0 10 chr2 70125259 70125557 -183131026 - AluSq SINE Alu -18 295 1 422 250 46 83 chr2 70125557 70125725 -183130858 + L2 LINE L2 3152 3312 -1 189 294 110 78 chr2 70126785 70127000 -183129583 + L2 LINE L2 2839 3064 -249 1085 88 6 0 chr2 70127000 70127160 -183129423 - L1MA4A LINE L1 -1 6302 6142 189 294 110 78 chr2 70127160 70127189 -183129394 + L2 LINE L2 3064 3091 -222 202 320 40 0 chr2 70127251 70127326 -183129257 + L2 LINE L2 3223 3300 -13 189 0 0 0 chr2 70127326 70127347 -183129236 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 197 268 0 0 chr2 70127673 70127714 -183128869 + MIR SINE MIR 94 134 -74 246 290 54 11 chr2 70128651 70128744 -183127839 - MIR SINE MIR -95 167 71 396 0 0 0 chr2 70128878 70128922 -183127661 + (CA)n Simple_repeat Simple_repeat 2 45 0 613 181 96 28 chr2 70128995 70129172 -183127411 - MER53 DNA DNA 0 189 1 534 240 123 7 chr2 70129380 70129534 -183127049 + MIR SINE MIR 77 248 -14 190 243 171 0 chr2 70129587 70129657 -183126926 - MIR SINE MIR -64 144 63 644 287 173 46 chr2 70129754 70130298 -183126285 + MLT1L LTR MaLR 3 615 0 243 61 0 0 chr2 70130832 70130865 -183125718 + (TAA)n Simple_repeat Simple_repeat 3 35 0 291 307 114 51 chr2 70131017 70131193 -183125390 - MER5A DNA MER1_type 0 189 3 375 221 0 26 chr2 70131250 70131327 -183125256 + MER5A DNA MER1_type 1 75 -114 843 158 0 0 chr2 70131327 70131494 -183125089 - FLAM_C SINE Alu 0 167 1 624 232 29 22 chr2 70131523 70131661 -183124922 + MER5A DNA MER1_type 51 189 0 479 182 71 10 chr2 70134008 70134048 -183122535 + MER2 DNA MER2_type 1 37 -308 372 94 0 0 chr2 70134048 70134101 -183122482 + (CA)n Simple_repeat Simple_repeat 2 54 0 479 182 71 10 chr2 70134101 70134159 -183122424 + MER2 DNA MER2_type 37 105 -240 207 194 0 0 chr2 70134207 70134243 -183122340 + (CATATA)n Simple_repeat Simple_repeat 2 37 0 482 290 76 34 chr2 70134268 70134359 -183122224 - MIR SINE MIR -10 252 166 910 214 37 23 chr2 70134359 70134574 -183122009 - MER20 DNA MER1_type -1 218 1 482 290 76 34 chr2 70134574 70134720 -183121863 - MIR SINE MIR -96 166 5 711 286 46 17 chr2 70136908 70137149 -183119434 + MIR SINE MIR 15 262 0 4343 152 31 27 chr2 70137722 70138630 -183117953 + L1MB2 LINE L1 4883 5786 -385 223 28 56 0 chr2 70138630 70138666 -183117917 + (TA)n Simple_repeat Simple_repeat 1 38 0 * 279 0 0 0 chr2 70138665 70138696 -183117887 + (CA)n Simple_repeat Simple_repeat 2 32 0 4343 152 31 27 chr2 70138666 70139035 -183117548 + L1MB2 LINE L1 5786 6135 -36 470 236 11 0 chr2 70139995 70140180 -183116403 + CT-rich Low_complexity Low_complexity 1 187 0 22 56 0 0 chr2 70140738 70140774 -183115809 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr2 70140887 70140908 -183115675 + AT_rich Low_complexity Low_complexity 1 21 0 814 191 0 0 chr2 70141016 70141152 -183115431 - FRAM SINE Alu -17 159 24 201 74 0 0 chr2 70141199 70141226 -183115357 + (TG)n Simple_repeat Simple_repeat 2 28 0 229 130 0 0 chr2 70141234 70141280 -183115303 - LTR66 LTR ERVL -171 439 394 573 129 0 0 chr2 70141288 70141381 -183115202 + (CA)n Simple_repeat Simple_repeat 2 94 0 664 176 0 40 chr2 70141381 70141506 -183115077 - FLAM_C SINE Alu -23 120 1 390 318 210 0 chr2 70141655 70141831 -183114752 + MIR SINE MIR 48 260 -2 254 346 12 0 chr2 70141839 70141920 -183114663 + MIR3 SINE MIR 123 204 -4 823 184 66 0 chr2 70145036 70145188 -183111395 - FRAM SINE Alu -13 163 2 2423 85 0 7 chr2 70145201 70145507 -183111076 - AluY SINE Alu -7 304 1 29 47 0 0 chr2 70145814 70145857 -183110726 + AT_rich Low_complexity Low_complexity 1 43 0 766 58 0 0 chr2 70146068 70146171 -183110412 + L1PA6 LINE L1 5918 6020 -134 267 245 0 0 chr2 70147060 70147109 -183109474 + MIR3 SINE MIR 113 161 -47 13395 131 52 7 chr2 70147270 70149584 -183106999 - Tigger1 DNA MER2_type 0 2418 1 190 355 28 37 chr2 70149597 70149704 -183106879 - MIR SINE MIR -61 147 42 246 246 113 58 chr2 70152410 70152566 -183104017 + MLT1J1 LTR MaLR 65 234 -216 315 258 62 47 chr2 70152591 70152719 -183103864 + MLT1J LTR MaLR 329 458 -53 573 277 27 58 chr2 70153868 70154092 -183102491 - MIR SINE MIR -29 233 17 245 303 70 53 chr2 70154415 70154659 -183101924 + L2 LINE L2 2624 2871 -443 226 376 0 0 chr2 70155050 70155143 -183101440 + MIR SINE MIR 169 261 -1 455 303 56 0 chr2 70155185 70155327 -183101256 + L2 LINE L2 3160 3309 -4 947 106 17 17 chr2 70156237 70156416 -183100167 + (TCTCC)n Simple_repeat Simple_repeat 1 179 0 3759 162 13 25 chr2 70156463 70157216 -183099367 - L1PA14 LINE L1 -1754 4392 3649 * 5838 133 19 0 chr2 70157208 70158940 -183097643 + L1PA14 LINE L1 4399 6160 -1 624 285 53 19 chr2 70160736 70160974 -183095609 + MIR SINE MIR 20 262 0 653 305 11 16 chr2 70161115 70161305 -183095278 + MIR SINE MIR 55 243 -19 243 327 113 61 chr2 70161660 70162413 -183094170 + L2 LINE L2 1967 2758 -556 362 287 87 26 chr2 70162714 70162909 -183093674 - MLT1K LTR MaLR -49 539 333 463 277 10 10 chr2 70165495 70165596 -183090987 - L2 LINE L2 -35 3237 3137 21 0 0 0 chr2 70165708 70165729 -183090854 + AT_rich Low_complexity Low_complexity 1 21 0 325 268 113 14 chr2 70166764 70166906 -183089677 - L2 LINE L2 0 3313 3158 263 355 36 14 chr2 70167347 70167485 -183089098 - MIR SINE MIR -75 187 47 397 313 14 7 chr2 70168855 70169002 -183087581 - MLT1J1 LTR MaLR -264 182 35 231 331 99 7 chr2 70169298 70169440 -183087143 - L3b LINE CR1 -299 1284 1130 396 305 19 0 chr2 70170677 70170782 -183085801 + MIR SINE MIR 47 153 -109 1293 160 29 0 chr2 70170793 70171031 -183085552 + L1PA13 LINE L1 5912 6156 -7 273 57 0 0 chr2 70171176 70171211 -183085372 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 333 0 0 0 chr2 70173074 70173111 -183083472 + (TG)n Simple_repeat Simple_repeat 2 38 0 730 235 34 22 chr2 70174532 70174711 -183081872 + MLT1B LTR MaLR 8 188 -186 227 200 0 22 chr2 70174711 70174756 -183081827 + CT-rich Low_complexity Low_complexity 4 47 0 877 221 47 0 chr2 70174767 70174957 -183081626 + MLT1B LTR MaLR 192 390 0 2355 67 3 0 chr2 70175120 70175420 -183081163 + AluY SINE Alu 1 301 -10 443 203 38 30 chr2 70175770 70175903 -183080680 - MLT1A2 LTR MaLR -201 189 55 411 331 48 62 chr2 70176004 70176442 -183080141 + L2 LINE L2 2216 2647 -667 393 353 112 12 chr2 70176493 70176983 -183079600 + L2 LINE L2 1843 2381 -933 1015 273 103 50 chr2 70177487 70178147 -183078436 - L1M4 LINE L1 -1870 4276 3582 430 324 91 18 chr2 70178388 70178946 -183077637 - L1M4 LINE L1 -2887 3259 2661 3000 160 20 4 chr2 70179201 70179752 -183076831 + L1MA3 LINE L1 4534 5093 -1053 * 4726 125 24 1 chr2 70179743 70180493 -183076090 + L1MA3 LINE L1 5440 6206 -99 489 264 83 31 chr2 70180491 70180720 -183075863 + L1ME4a LINE L1 5585 5826 -295 * 2564 225 39 7 chr2 70180723 70181333 -183075250 + L1MC4 LINE L1 7407 8036 -6 264 276 48 14 chr2 70181375 70181520 -183075063 - L1M4 LINE L1 -3761 2385 2236 346 249 191 22 chr2 70181526 70181803 -183074780 - L1ME4a LINE L1 -162 5959 5636 24 0 0 0 chr2 70181815 70181839 -183074744 + AT_rich Low_complexity Low_complexity 1 24 0 846 159 148 42 chr2 70181916 70182105 -183074478 + AluJb SINE Alu 87 295 -17 649 36 0 0 chr2 70182277 70182360 -183074223 - L1PA4 LINE L1 -3 6152 6070 28 0 0 0 chr2 70182422 70182450 -183074133 + AT_rich Low_complexity Low_complexity 1 28 0 411 328 94 56 chr2 70182474 70182687 -183073896 - L1ME4a LINE L1 -935 5211 5008 1813 178 0 9 chr2 70182687 70183002 -183073581 - AluSx SINE Alu 0 312 1 411 328 94 56 chr2 70183002 70183417 -183073166 - L1ME4a LINE L1 -1138 5008 4559 192 152 0 0 chr2 70184697 70184730 -183071853 + GA-rich Low_complexity Low_complexity 4 36 0 201 121 0 0 chr2 70185080 70185113 -183071470 + (TTCA)n Simple_repeat Simple_repeat 4 36 0 281 329 156 48 chr2 70185325 70185801 -183070782 - L2 LINE L2 -212 3060 2467 393 22 0 0 chr2 70185801 70185847 -183070736 + (TG)n Simple_repeat Simple_repeat 2 47 0 281 329 156 48 chr2 70185847 70186081 -183070502 - L2 LINE L2 -805 2467 2260 21 36 0 0 chr2 70186296 70186324 -183070259 + AT_rich Low_complexity Low_complexity 1 28 0 5934 40 7 0 chr2 70186324 70187049 -183069534 - L1PA5 LINE L1 -8 6146 5417 2220 70 0 10 chr2 70187049 70187348 -183069235 + L1P LINE L1 704 999 -5147 290 278 0 0 chr2 70188277 70188367 -183068216 - L1MA8 LINE L1 -22 6269 6180 2669 130 31 5 chr2 70188458 70188873 -183067710 - MSTA LTR MaLR 0 428 3 230 294 59 0 chr2 70189027 70189095 -183067488 - HsTC2 DNA Tc2 -1076 822 751 25 0 0 0 chr2 70189344 70189369 -183067214 + AT_rich Low_complexity Low_complexity 1 25 0 796 294 45 58 chr2 70189832 70190318 -183066265 - L1MC/D LINE L1 -2024 5784 5305 252 247 91 0 chr2 70190585 70190662 -183065921 - L1P LINE L1 -1137 5009 4926 468 337 63 48 chr2 70190677 70191261 -183065322 - L1MC/D LINE L1 -1236 4910 4318 313 360 0 14 chr2 70191333 70191480 -183065103 - L1P LINE L1 -1903 4243 4099 394 286 206 29 chr2 70191627 70191938 -183064645 - L1MC/D LINE L1 -2163 3983 3618 237 296 14 0 chr2 70192161 70192232 -183064351 - L1MC/D LINE L1 -1892 5916 5845 330 250 68 57 chr2 70192318 70192408 -183064175 - L1MC/D LINE L1 -341 5780 5693 3145 150 83 40 chr2 70192408 70193103 -183063480 + LTR8A LTR ERV1 3 727 0 330 250 68 57 chr2 70193103 70193188 -183063395 - L1MC/D LINE L1 -428 5693 5603 3216 164 47 8 chr2 70194415 70195035 -183061548 + LTR48B LTR ERV1 1 644 0 2008 124 7 3 chr2 70196804 70197087 -183059496 + AluSg SINE Alu 1 284 -26 539 247 0 71 chr2 70197160 70197314 -183059269 + MIR SINE MIR 12 154 -108 1392 225 146 22 chr2 70197321 70197765 -183058818 - L1MC4 LINE L1 -903 7139 6641 314 263 43 27 chr2 70197810 70198007 -183058576 - L1MC4 LINE L1 -1189 6619 6472 236 270 0 0 chr2 70198131 70198194 -183058389 + GA-rich Low_complexity Low_complexity 2 64 0 2309 79 0 0 chr2 70198474 70198764 -183057819 - AluSg SINE Alu -20 290 1 431 301 154 14 chr2 70198817 70199408 -183057175 + L1MEc LINE L1 1085 1758 -4638 786 154 123 5 chr2 70199482 70199767 -183056816 - THE1C LTR MaLR 0 375 1 1680 81 0 14 chr2 70200048 70200270 -183056313 + AluSg/x SINE Alu 87 305 -5 23 0 0 0 chr2 70200271 70200294 -183056289 + AT_rich Low_complexity Low_complexity 1 23 0 238 204 23 0 chr2 70200474 70200562 -183056021 + (TA)n Simple_repeat Simple_repeat 1 90 0 645 298 33 3 chr2 70200568 70200897 -183055686 + L1MEc LINE L1 2379 2717 -3498 813 219 179 21 chr2 70200904 70201183 -183055400 + MER5C DNA MER1_type 2 324 0 482 248 0 24 chr2 70201186 70201311 -183055272 + L1MEc LINE L1 2719 2840 -3375 831 143 0 0 chr2 70201362 70201481 -183055102 + FLAM_C SINE Alu 6 124 -19 766 191 3 17 chr2 70202362 70202539 -183054044 + L1M4 LINE L1 5337 5515 -669 440 212 18 0 chr2 70202823 70202936 -183053647 + L1M4 LINE L1 5471 5585 -599 * 2205 237 69 61 chr2 70202926 70203609 -183052974 - L1ME1 LINE L1 -48 6118 5427 2719 79 6 0 chr2 70203609 70203962 -183052621 + THE1A LTR MaLR 1 355 0 2205 237 69 61 chr2 70203962 70204163 -183052420 - L1ME1 LINE L1 -739 5427 5229 568 202 0 0 chr2 70204157 70204261 -183052322 - L1ME LINE L1 -488 5747 5644 * 3685 232 85 32 chr2 70204260 70205615 -183050968 + L1M4 LINE L1 3790 5215 -931 2661 267 45 38 chr2 70205614 70205973 -183050610 - L1ME LINE L1 -2019 4196 3841 * 7068 180 10 13 chr2 70205973 70208198 -183048385 + L1PA15 LINE L1 3912 6165 0 2661 267 45 38 chr2 70208198 70208889 -183047694 - L1ME LINE L1 -2374 3841 3135 441 0 0 0 chr2 70208889 70208938 -183047645 + (TG)n Simple_repeat Simple_repeat 2 50 0 2661 267 45 38 chr2 70208938 70208992 -183047591 - L1ME LINE L1 -3080 3135 3083 5489 46 6 1 chr2 70209022 70209714 -183046869 - L1PA5 LINE L1 0 6154 5460 3798 35 0 0 chr2 70209714 70210176 -183046407 - L1PA5 LINE L1 -1588 4558 4097 2588 260 40 29 chr2 70210175 70210960 -183045623 - L1ME LINE L1 -5553 843 51 * 23 0 0 0 chr2 70211445 70211468 -183045115 + AT_rich Low_complexity Low_complexity 1 23 0 34 79 0 0 chr2 70211612 70211688 -183044895 + AT_rich Low_complexity Low_complexity 1 76 0 21 0 0 0 chr2 70211928 70211949 -183044634 + AT_rich Low_complexity Low_complexity 1 21 0 253 229 0 48 chr2 70212811 70212894 -183043689 + (TATATG)n Simple_repeat Simple_repeat 3 81 0 471 240 0 0 chr2 70213369 70213515 -183043068 + (TA)n Simple_repeat Simple_repeat 1 146 0 340 317 67 18 chr2 70213935 70214099 -183042484 + MER5A DNA MER1_type 7 189 0 252 0 0 0 chr2 70214945 70214973 -183041610 + (TG)n Simple_repeat Simple_repeat 2 29 0 247 246 16 0 chr2 70215545 70215606 -183040977 + MER116 DNA Mariner 18 79 -1 287 262 122 68 chr2 70215621 70215884 -183040699 - L1ME4a LINE L1 -230 5891 5615 1754 140 4 4 chr2 70215986 70216243 -183040340 + AluSx SINE Alu 1 257 -55 1355 112 5 10 chr2 70216243 70216440 -183040143 + AluSp SINE Alu 105 300 -13 232 245 0 0 chr2 70217709 70217758 -183038825 + (GAATG)n Simple_repeat Simple_repeat 3 51 0 465 339 118 31 chr2 70218089 70218478 -183038105 + L2 LINE L2 2869 3291 -22 222 37 0 0 chr2 70218483 70218510 -183038073 + (TGGA)n Simple_repeat Simple_repeat 1 27 0 2297 64 0 0 chr2 70220057 70220383 -183036200 - AluY SINE Alu 0 328 3 6981 53 20 5 chr2 70220394 70221355 -183035228 - L1PA8 LINE L1 -5 6167 5205 468 281 50 0 chr2 70222016 70222137 -183034446 + MIR SINE MIR 28 154 -108 225 196 0 0 chr2 70222660 70222711 -183033872 + (TA)n Simple_repeat Simple_repeat 1 51 0 1695 217 143 18 chr2 70224846 70225454 -183031129 - L1MC4 LINE L1 -4 8038 7355 1095 275 111 22 chr2 70225452 70226328 -183030255 - L1MC4a LINE L1 -1404 6404 5414 * 268 327 50 23 chr2 70226582 70226842 -183029741 - L1MC4a LINE L1 -990 5156 4890 1364 301 100 33 chr2 70227322 70227789 -183028794 - L1MC4a LINE L1 -1310 4836 4402 1787 152 99 6 chr2 70227789 70227951 -183028632 - THE1C LTR MaLR 0 375 230 372 43 0 0 chr2 70227951 70227997 -183028586 + (GA)n Simple_repeat Simple_repeat 1 46 0 1787 152 99 6 chr2 70227997 70228177 -183028406 - THE1C LTR MaLR -145 230 1 1364 301 100 33 chr2 70228177 70229873 -183026710 - L1MC4a LINE L1 -1744 4402 2527 219 208 21 0 chr2 70233644 70233692 -183022891 + (TTTA)n Simple_repeat Simple_repeat 1 49 0 1462 134 17 0 chr2 70233692 70233930 -183022653 - L1MB1 LINE L1 -2 6166 5925 21 0 0 0 chr2 70234061 70234082 -183022501 + AT_rich Low_complexity Low_complexity 1 21 0 307 260 30 0 chr2 70236292 70236392 -183020191 + (TA)n Simple_repeat Simple_repeat 2 104 0 1757 224 70 27 chr2 70236516 70236958 -183019625 + L1MA1 LINE L1 2 462 -7103 15894 149 21 14 chr2 70236960 70238678 -183017905 + L1MA1 LINE L1 2154 3859 -3862 2017 82 26 56 chr2 70238678 70239006 -183017577 + AluY SINE Alu 1 319 0 15894 149 21 14 chr2 70239006 70242804 -183013779 + L1MA1 LINE L1 3859 7721 0 361 248 152 16 chr2 70243791 70243916 -183012667 - L2 LINE L2 -3 3310 3169 520 281 70 66 chr2 70244048 70244304 -183012279 + MIR SINE MIR 4 260 -2 573 247 29 12 chr2 70244700 70244870 -183011713 + L1ME4a LINE L1 5558 5730 -391 336 242 107 27 chr2 70244983 70245132 -183011451 + L1ME4a LINE L1 5961 6121 0 1132 179 44 64 chr2 70245903 70246232 -183010351 + MER33 DNA MER1_type 1 311 -13 1847 198 37 32 chr2 70248834 70249299 -183007284 + MLT1C LTR MaLR 1 467 0 233 305 204 24 chr2 70249338 70249505 -183007078 + MIR3 SINE MIR 2 198 -10 213 295 65 0 chr2 70250223 70250312 -183006271 - MIR3 SINE MIR -40 168 70 3018 51 0 3 chr2 70250471 70250846 -183005737 + L1PA7 LINE L1 5777 6150 -4 1329 192 104 24 chr2 70252654 70252992 -183003591 + MLT1A1 LTR MaLR 1 365 0 195 139 0 0 chr2 70253086 70253122 -183003461 + (TC)n Simple_repeat Simple_repeat 1 36 0 4809 94 18 0 chr2 70254709 70255393 -183001190 + L1PA13 LINE L1 5465 6160 -3 1745 167 3 10 chr2 70255935 70256240 -183000343 + AluJb SINE Alu 1 303 -9 1822 114 13 160 chr2 70256912 70257184 -182999399 - MLT1B LTR MaLR -2 388 208 2061 112 12 40 chr2 70257184 70257505 -182999078 - AluSx SINE Alu 0 312 1 1822 114 13 160 chr2 70257505 70257687 -182998896 - MLT1B LTR MaLR -182 208 1 407 370 43 0 chr2 70257977 70258161 -182998422 - MIR SINE MIR -6 256 65 302 309 125 25 chr2 70258697 70259056 -182997527 + L1ME4a LINE L1 5724 6118 -3 570 255 37 12 chr2 70259386 70259547 -182997036 + MER5B DNA MER1_type 9 173 -5 222 274 0 0 chr2 70259973 70260024 -182996559 + L2 LINE L2 3262 3312 -1 853 214 217 18 chr2 70262404 70262838 -182993745 - MER113 DNA MER1_type? 0 521 2 258 32 0 0 chr2 70263653 70263684 -182992899 + (CA)n Simple_repeat Simple_repeat 2 32 0 6110 18 0 3 chr2 70264732 70265444 -182991139 - L1PA3 LINE L1 -3 6152 5443 227 299 99 45 chr2 70265804 70266005 -182990578 + L2 LINE L2 2037 2248 -1066 840 219 66 0 chr2 70266016 70266212 -182990371 - LTR16C LTR ERVL -5 486 278 201 355 0 0 chr2 70267058 70267120 -182989463 + MIR SINE MIR 120 181 -81 195 162 0 0 chr2 70267933 70267970 -182988613 + (CA)n Simple_repeat Simple_repeat 2 38 0 193 175 25 25 chr2 70268841 70268881 -182987702 + L2 LINE L2 3216 3255 -17 * 215 159 23 23 chr2 70268848 70268892 -182987691 + MIR SINE MIR 219 262 0 306 0 0 0 chr2 70270123 70270157 -182986426 + (TG)n Simple_repeat Simple_repeat 2 35 0 731 171 17 34 chr2 70270228 70270404 -182986179 + L1MA10 LINE L1 6161 6333 -1 378 351 86 56 chr2 70270658 70271054 -182985529 - L2 LINE L2 -2 3270 2863 232 310 39 54 chr2 70271154 70271283 -182985300 + MER5A DNA MER1_type 44 170 -19 1625 171 87 5 chr2 70271975 70272354 -182984229 + Charlie1 DNA MER1_type 2346 2755 -6 243 0 0 0 chr2 70272574 70272601 -182983982 + (A)n Simple_repeat Simple_repeat 1 27 0 35 63 0 0 chr2 70272876 70272939 -182983644 + AT_rich Low_complexity Low_complexity 1 63 0 308 355 62 28 chr2 70273021 70273232 -182983351 - L3 LINE CR1 -774 803 586 227 226 19 0 chr2 70274502 70274555 -182982028 + (TTCA)n Simple_repeat Simple_repeat 1 54 0 950 296 45 0 chr2 70275171 70275458 -182981125 + LTR16C LTR ERVL 192 491 0 266 337 53 0 chr2 70275886 70275981 -182980602 - L2 LINE L2 0 3313 3214 275 238 202 0 chr2 70276027 70276111 -182980472 - L2 LINE L2 -5 3308 3208 1633 158 46 46 chr2 70277421 70277724 -182978859 - AluJo SINE Alu -5 307 5 1483 196 17 29 chr2 70277748 70277870 -182978713 - L1MC3 LINE L1 -1629 6156 6034 234 0 0 0 chr2 70277870 70277896 -182978687 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1483 196 17 29 chr2 70277896 70278119 -182978464 - L1MC3 LINE L1 -1751 6034 5815 41935 39 3 4 chr2 70278140 70284295 -182972288 - L1PA4 LINE L1 -3 6152 1 423 358 12 18 chr2 70284412 70284577 -182972006 - MER5A DNA MER1_type -9 180 17 256 280 50 75 chr2 70284865 70285065 -182971518 - MLT1H LTR MaLR -251 298 104 287 321 46 61 chr2 70285177 70285373 -182971210 + MIR SINE MIR 20 212 -50 220 329 53 33 chr2 70285475 70285627 -182970956 + L2 LINE L2 2622 2776 -538 1254 152 62 134 chr2 70286246 70286620 -182969963 + MER7A DNA MER2_type 2 346 0 344 287 44 17 chr2 70286808 70286939 -182969644 - MIR SINE MIR -68 140 39 195 265 84 12 chr2 70287664 70287747 -182968836 + L3b LINE CR1 1286 1374 -209 207 0 0 0 chr2 70288106 70288129 -182968454 + (A)n Simple_repeat Simple_repeat 1 23 0 2041 145 3 3 chr2 70288406 70288717 -182967866 + AluSx SINE Alu 1 311 -1 241 361 0 14 chr2 70289073 70289145 -182967438 - L2 LINE L2 -17 3255 3185 324 358 185 1 chr2 70289223 70289396 -182967187 - MIR3 SINE MIR -2 206 1 217 277 0 0 chr2 70289625 70289690 -182966893 + (ATG)n Simple_repeat Simple_repeat 1 65 0 304 238 12 24 chr2 70290372 70290456 -182966127 + MIR SINE MIR 133 215 -47 244 291 0 0 chr2 70290482 70290568 -182966015 + (CAT)n Simple_repeat Simple_repeat 1 86 0 1042 236 34 48 chr2 70291709 70292160 -182964423 + L1ME1 LINE L1 5452 5857 -309 613 236 37 15 chr2 70292168 70292392 -182964191 + L1MA10 LINE L1 5944 6326 -8 25 75 0 0 chr2 70293241 70293294 -182963289 + AT_rich Low_complexity Low_complexity 1 53 0 448 248 26 26 chr2 70293552 70293665 -182962918 + MER5B DNA MER1_type 4 116 -62 1392 97 23 0 chr2 70294433 70294650 -182961933 + L1MA4A LINE L1 6080 6301 -2 329 325 26 0 chr2 70294809 70294923 -182961660 - MER5A DNA MER1_type -65 124 8 304 288 206 14 chr2 70294920 70295066 -182961517 - MER5A DNA MER1_type -4 185 12 * 814 245 48 0 chr2 70295328 70295536 -182961047 + MER58A DNA MER1_type 7 224 0 528 203 189 7 chr2 70296108 70296256 -182960327 + MER5A DNA MER1_type 14 188 -1 329 307 207 7 chr2 70296280 70296430 -182960153 + MIR3 SINE MIR 16 195 -13 208 333 0 0 chr2 70296735 70296798 -182959785 + GA-rich Low_complexity Low_complexity 2 64 0 24 32 0 0 chr2 70297144 70297175 -182959408 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr2 70298378 70298401 -182958182 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 70299191 70299212 -182957371 + AT_rich Low_complexity Low_complexity 1 21 0 1761 184 3 0 chr2 70299628 70299932 -182956651 + AluSx SINE Alu 1 305 -7 212 98 0 49 chr2 70300008 70300049 -182956534 + (GGAA)n Simple_repeat Simple_repeat 3 41 0 22 56 0 0 chr2 70300232 70300268 -182956315 + AT_rich Low_complexity Low_complexity 1 36 0 571 164 23 6 chr2 70302120 70302297 -182954286 + (CA)n Simple_repeat Simple_repeat 1 180 0 235 136 0 30 chr2 70302314 70302380 -182954203 + (CA)n Simple_repeat Simple_repeat 1 64 0 305 206 12 24 chr2 70302669 70302839 -182953744 + (CA)n Simple_repeat Simple_repeat 2 169 0 310 264 19 9 chr2 70302851 70302957 -182953626 + (CA)n Simple_repeat Simple_repeat 1 107 0 1553 206 51 43 chr2 70305239 70305632 -182950951 + MSTD LTR MaLR 1 396 0 471 313 87 15 chr2 70305745 70305940 -182950643 - MIR SINE MIR 0 262 54 810 304 115 31 chr2 70306374 70306854 -182949729 - MER115 DNA AcHobo -6 687 168 299 248 290 41 chr2 70306873 70307018 -182949565 + MER5A DNA MER1_type 9 189 0 209 310 47 58 chr2 70307377 70307548 -182949035 + MER5A DNA MER1_type 3 171 -18 220 328 30 53 chr2 70307410 70307541 -182949042 - MER5B DNA MER1_type -25 153 26 203 194 0 0 chr2 70307930 70307966 -182948617 + A-rich Low_complexity Low_complexity 1 36 0 358 278 204 31 chr2 70308136 70308327 -182948256 - MIR SINE MIR -5 257 34 653 236 171 20 chr2 70308917 70309116 -182947467 + MIR SINE MIR 13 241 -21 21 57 0 0 chr2 70310118 70310153 -182946430 + AT_rich Low_complexity Low_complexity 1 35 0 187 244 24 0 chr2 70310512 70310553 -182946030 - MIR SINE MIR -12 250 209 724 249 141 19 chr2 70310603 70311041 -182945542 + MLT1H LTR MaLR 53 585 -5 246 213 115 0 chr2 70311072 70311133 -182945450 - MIR SINE MIR -77 185 118 2144 113 7 0 chr2 70311153 70311446 -182945137 + AluSq SINE Alu 1 295 -18 294 256 263 0 chr2 70311814 70311947 -182944636 - MIR3 SINE MIR -11 197 30 25 0 0 0 chr2 70312404 70312429 -182944154 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr2 70315700 70315722 -182940861 + AT_rich Low_complexity Low_complexity 1 22 0 202 132 38 0 chr2 70316271 70316324 -182940259 + (TA)n Simple_repeat Simple_repeat 2 56 0 660 113 7 14 chr2 70316334 70316343 -182940240 + (TAGA)n Simple_repeat Simple_repeat 2 10 -132 1986 181 12 3 chr2 70316343 70316681 -182939902 - MER61A LTR ERV1 -2 341 1 660 113 7 14 chr2 70316681 70316813 -182939770 + (TAGA)n Simple_repeat Simple_repeat 10 142 0 2349 191 28 6 chr2 70316817 70317283 -182939300 - MLT2B2 LTR ERVL -39 476 1 22 0 0 0 chr2 70317967 70317989 -182938594 + AT_rich Low_complexity Low_complexity 1 22 0 1617 193 81 127 chr2 70318441 70319222 -182937361 + LTR1B LTR ERV1 1 745 -81 527 240 8 8 chr2 70319301 70319422 -182937161 + LTR28 LTR ERV1 900 1020 0 228 355 75 0 chr2 70320417 70320524 -182936059 + MER5A DNA MER1_type 13 127 -62 505 187 0 0 chr2 70320790 70320881 -182935702 + FRAM SINE Alu 76 166 -10 538 214 18 109 chr2 70322065 70322341 -182934242 - LTR41 LTR ERVL -6 767 517 646 195 86 11 chr2 70322496 70322670 -182933913 - LTR41 LTR ERVL -586 187 1 259 254 0 14 chr2 70322752 70322823 -182933760 - ERVL LTR ERVL -92 5672 5603 23 33 0 0 chr2 70323372 70323402 -182933181 + AT_rich Low_complexity Low_complexity 1 30 0 237 159 0 0 chr2 70324563 70324607 -182931976 + (CATATA)n Simple_repeat Simple_repeat 5 48 0 351 351 42 24 chr2 70324793 70324958 -182931625 - MIR3 SINE MIR -6 202 35 457 219 9 0 chr2 70325352 70325457 -182931126 - MER20 DNA MER1_type -78 141 36 843 199 14 54 chr2 70325874 70326095 -182930488 - MER20 DNA MER1_type -7 212 1 678 193 14 122 chr2 70326839 70327052 -182929531 + MER20 DNA MER1_type 29 218 -1 1216 219 132 15 chr2 70327338 70327671 -182928912 + MLT1A2 LTR MaLR 3 374 0 260 296 0 0 chr2 70328455 70328526 -182928057 - MIR SINE MIR -24 238 168 439 219 42 8 chr2 70329279 70329398 -182927185 + L2 LINE L2 3172 3294 -19 449 196 0 9 chr2 70329404 70329511 -182927072 + GA-rich Low_complexity Low_complexity 4 109 0 207 204 0 0 chr2 70329630 70329674 -182926909 + GA-rich Low_complexity Low_complexity 1 44 0 221 343 101 41 chr2 70329764 70329933 -182926650 - MIR3 SINE MIR -25 183 5 956 121 20 0 chr2 70330083 70330232 -182926351 - L1PA15 LINE L1 -1 6164 6013 180 293 27 53 chr2 70330918 70330993 -182925590 - MIR SINE MIR -102 160 88 400 349 60 0 chr2 70332075 70332224 -182924359 + L2 LINE L2 3115 3272 0 205 317 56 78 chr2 70332482 70332662 -182923921 - L3b LINE CR1 -134 1449 1274 1134 251 119 15 chr2 70332681 70333131 -182923452 - MLT1H LTR MaLR 0 549 1 196 362 0 0 chr2 70333245 70333303 -182923280 - L2 LINE L2 -2 3270 3213 431 204 120 0 chr2 70333514 70333622 -182922961 + MER5C DNA MER1_type 1 121 -203 192 177 190 76 chr2 70333648 70333727 -182922856 + MER5C DNA MER1_type 237 324 0 1217 204 97 44 chr2 70333780 70334119 -182922464 + MLT1D LTR MaLR 3 359 -146 6269 131 28 8 chr2 70337336 70338679 -182917904 - L1MA3 LINE L1 0 6305 4946 426 260 108 12 chr2 70339165 70339327 -182917256 - MIR3 SINE MIR -62 146 3 616 289 51 0 chr2 70339901 70340098 -182916485 - MIR SINE MIR -8 254 48 406 261 75 129 chr2 70340629 70341016 -182915567 - L2 LINE L2 -2 3270 2905 2370 112 50 0 chr2 70341142 70341499 -182915084 + THE1C LTR MaLR 1 375 0 251 293 124 91 chr2 70341922 70342400 -182914183 + L2 LINE L2 2581 3063 -209 231 301 12 92 chr2 70343362 70343535 -182913048 + LTR16C LTR ERVL 40 198 -293 362 353 38 0 chr2 70343997 70344130 -182912453 + MIR3 SINE MIR 69 206 -2 499 319 31 22 chr2 70344672 70344898 -182911685 + MIR SINE MIR 27 254 -8 512 274 140 22 chr2 70344955 70345134 -182911449 + MIR3 SINE MIR 7 206 -2 2453 71 0 0 chr2 70345380 70345677 -182910906 - AluY SINE Alu -4 307 11 350 220 59 42 chr2 70346279 70346397 -182910186 + MER117 DNA MER1_type 2 121 -76 611 210 28 14 chr2 70346499 70346642 -182909941 + MER58B DNA MER1_type 197 341 0 1303 164 84 3 chr2 70347294 70347593 -182908990 + MER33 DNA MER1_type 1 323 -1 21 0 0 0 chr2 70347602 70347623 -182908960 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 70348481 70348505 -182908078 + AT_rich Low_complexity Low_complexity 1 24 0 388 271 40 27 chr2 70349969 70350102 -182906481 - MIR SINE MIR -66 142 36 893 145 0 0 chr2 70350240 70350371 -182906212 - FLAM_C SINE Alu 0 133 3 2213 85 27 3 chr2 70350386 70350681 -182905902 - AluY SINE Alu -9 302 1 4944 189 21 24 chr2 70350685 70352212 -182904371 - L1MA10 LINE L1 -1 6333 4817 259 189 19 0 chr2 70352431 70352484 -182904099 - L2 LINE L2 -4 3268 3215 1849 169 6 31 chr2 70352887 70353206 -182903377 - AluJo SINE Alu 0 312 2 745 227 12 85 chr2 70354321 70354568 -182902015 - MLT1H1 LTR MaLR -1 554 326 263 268 0 0 chr2 70357187 70357258 -182899325 + T-rich Low_complexity Low_complexity 1 71 0 372 360 27 7 chr2 70358209 70358356 -182898227 + MIR3 SINE MIR 58 207 -1 22 70 0 0 chr2 70358764 70358807 -182897776 + AT_rich Low_complexity Low_complexity 1 43 0 1390 220 99 19 chr2 70359010 70359424 -182897159 - HsTC2 DNA Tc2 -1444 454 8 221 281 31 31 chr2 70360669 70360733 -182895850 - L2 LINE L2 -102 3170 3107 218 303 84 49 chr2 70362050 70362192 -182894391 - MIR SINE MIR -3 259 113 344 277 50 8 chr2 70363225 70363344 -182893239 - MIR3 SINE MIR -2 206 83 194 192 19 0 chr2 70363717 70363769 -182892814 + (TA)n Simple_repeat Simple_repeat 2 54 0 247 277 60 12 chr2 70364247 70364330 -182892253 + MIR SINE MIR 63 149 -113 219 69 0 0 chr2 70364517 70364546 -182892037 + (A)n Simple_repeat Simple_repeat 1 29 0 497 231 84 21 chr2 70365093 70365236 -182891347 + MIR SINE MIR 111 262 0 21 0 0 0 chr2 70366484 70366505 -182890078 + AT_rich Low_complexity Low_complexity 1 21 0 203 449 8 0 chr2 70367099 70367217 -182889366 + MIR SINE MIR 34 152 -110 337 263 123 26 chr2 70367888 70368002 -182888581 + L2 LINE L2 3173 3297 -16 250 351 88 42 chr2 70368070 70368332 -182888251 + L3b LINE CR1 1102 1375 -208 432 275 148 7 chr2 70368446 70368612 -182887971 - MIR SINE MIR -31 231 43 21 0 0 0 chr2 70372608 70372629 -182883954 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 70375228 70375249 -182881334 + AT_rich Low_complexity Low_complexity 1 21 0 52 64 0 0 chr2 70375356 70375450 -182881133 + AT_rich Low_complexity Low_complexity 1 94 0 360 264 18 36 chr2 70375468 70375578 -182881005 - MIR SINE MIR -76 132 25 241 299 185 13 chr2 70375869 70376026 -182880557 + LTR16C LTR ERVL 300 483 -8 338 250 102 16 chr2 70376959 70377087 -182879496 - L2 LINE L2 -15 3298 3160 342 207 147 17 chr2 70377200 70377316 -182879267 + MER105 DNA DNA 71 201 -3 2074 131 68 0 chr2 70378017 70378368 -182878215 + THE1C LTR MaLR 1 375 0 364 293 53 0 chr2 70378435 70378585 -182877998 + L1MC5 LINE L1 7260 7417 -544 374 201 62 7 chr2 70379632 70379776 -182876807 + (TA)n Simple_repeat Simple_repeat 2 153 0 472 294 99 20 chr2 70379864 70380065 -182876518 + MIR SINE MIR 40 256 -6 258 32 0 0 chr2 70380304 70380335 -182876248 + (TA)n Simple_repeat Simple_repeat 2 32 0 23 33 0 0 chr2 70380347 70380377 -182876206 + AT_rich Low_complexity Low_complexity 1 30 0 1541 95 24 0 chr2 70380467 70380677 -182875906 + L1PA11 LINE L1 5953 6167 -7 22 56 0 0 chr2 70380681 70380717 -182875866 + AT_rich Low_complexity Low_complexity 1 36 0 400 322 17 0 chr2 70382291 70382409 -182874174 + MER58 DNA MER1_type 167 286 -2134 265 185 19 0 chr2 70382429 70382483 -182874100 + MER58 DNA MER1_type 2366 2420 0 364 344 69 45 chr2 70382699 70382946 -182873637 - L3 LINE CR1 -3 1574 1322 1803 124 57 3 chr2 70382985 70383267 -182873316 - AluSx SINE Alu -15 297 1 324 349 8 23 chr2 70383351 70383480 -182873103 + MIR3 SINE MIR 14 140 -68 605 294 67 0 chr2 70384726 70384906 -182871677 - MIR SINE MIR -54 208 17 448 207 179 55 chr2 70384987 70385132 -182871451 - L2 LINE L2 0 3313 3151 228 293 85 9 chr2 70385739 70385845 -182870738 + L2 LINE L2 3158 3271 -1 252 270 32 0 chr2 70385849 70385912 -182870671 + GA-rich Low_complexity Low_complexity 1 65 0 184 348 85 18 chr2 70386534 70386698 -182869885 - MIR3 SINE MIR -7 201 27 374 304 22 22 chr2 70386773 70386911 -182869672 + MIR SINE MIR 28 165 -97 1694 184 3 0 chr2 70386917 70387199 -182869384 + AluJb SINE Alu 7 289 -23 181 83 56 0 chr2 70387202 70387238 -182869345 + (TA)n Simple_repeat Simple_repeat 2 39 0 1705 191 6 13 chr2 70387402 70387716 -182868867 - AluJb SINE Alu 0 312 1 1913 126 55 3 chr2 70387924 70388217 -182868366 + AluJo SINE Alu 1 308 -4 218 289 72 26 chr2 70388316 70388468 -182868115 - L2 LINE L2 -160 3112 2954 909 234 44 8 chr2 70388651 70388899 -182867684 + MIR SINE MIR 2 258 -4 652 300 39 33 chr2 70389402 70389765 -182866818 - L1MC4a LINE L1 -1927 5881 5517 313 276 0 13 chr2 70390364 70390440 -182866143 + MIR SINE MIR 34 108 -154 642 224 144 23 chr2 70390453 70390627 -182865956 + MER3 DNA MER1_type 6 200 -9 281 318 0 12 chr2 70390637 70390722 -182865861 + MIR SINE MIR 112 195 -67 2111 114 37 0 chr2 70390722 70391019 -182865564 + AluSx SINE Alu 1 308 -4 214 205 0 0 chr2 70391047 70391086 -182865497 + (TA)n Simple_repeat Simple_repeat 2 40 0 269 275 0 43 chr2 70391087 70391156 -182865427 + MIR SINE MIR 197 262 0 247 296 102 23 chr2 70392259 70392347 -182864236 + L2 LINE L2 3177 3271 -1 582 55 91 7 chr2 70393370 70393651 -182862932 + (TA)n Simple_repeat Simple_repeat 1 304 0 1828 184 55 3 chr2 70393664 70394011 -182862572 + MLT1A1 LTR MaLR 1 365 0 559 121 36 0 chr2 70394055 70394195 -182862388 + (TA)n Simple_repeat Simple_repeat 2 146 0 1505 214 50 6 chr2 70394197 70394545 -182862038 - MLT1A1 LTR MaLR -3 454 1 1019 196 5 0 chr2 70394938 70395147 -182861436 - L1MB7 LINE L1 -14 6170 5961 1084 191 84 0 chr2 70395148 70395399 -182861184 - L1M4 LINE L1 -1430 4716 4445 2001 141 0 10 chr2 70395585 70395882 -182860701 + AluSx SINE Alu 1 294 -18 2267 112 0 0 chr2 70396838 70397143 -182859440 + AluSg SINE Alu 1 305 -5 941 301 23 12 chr2 70398544 70398803 -182857780 + MIR SINE MIR 1 262 0 32 0 0 0 chr2 70399600 70399632 -182856951 + AT_rich Low_complexity Low_complexity 1 32 0 240 318 167 0 chr2 70400693 70400819 -182855764 + MIR3 SINE MIR 32 178 -30 570 277 2 7 chr2 70401068 70401216 -182855367 - MIR SINE MIR -51 157 9 276 81 0 0 chr2 70402972 70403009 -182853574 + L2 LINE L2 3262 3298 -15 185 65 32 0 chr2 70403011 70403042 -182853541 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 802 178 27 16 chr2 70403357 70403542 -182853041 - MER53 DNA DNA -2 187 1 307 235 9 9 chr2 70404311 70404426 -182852157 + (TA)n Simple_repeat Simple_repeat 2 116 0 2316 57 0 3 chr2 70404466 70404748 -182851835 + AluY SINE Alu 1 281 -30 339 65 0 0 chr2 70404984 70405030 -182851553 + (TA)n Simple_repeat Simple_repeat 2 47 0 287 357 39 26 chr2 70405031 70405185 -182851398 - MIR SINE MIR -71 191 36 833 303 56 0 chr2 70405641 70405872 -182850711 + MIR SINE MIR 19 262 0 348 24 0 0 chr2 70406246 70406287 -182850296 + (TG)n Simple_repeat Simple_repeat 2 42 0 205 178 0 0 chr2 70407789 70407834 -182848749 + T-rich Low_complexity Low_complexity 2 46 0 23 0 0 0 chr2 70407930 70407953 -182848630 + AT_rich Low_complexity Low_complexity 1 23 0 433 302 17 11 chr2 70408359 70408538 -182848045 - L1MB7 LINE L1 -303 5818 5639 22 0 0 0 chr2 70411240 70411262 -182845321 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr2 70412326 70412351 -182844232 + AT_rich Low_complexity Low_complexity 1 25 0 205 328 0 16 chr2 70412898 70412962 -182843621 - MIR SINE MIR -164 98 36 833 303 56 0 chr2 70413418 70413649 -182842934 + MIR SINE MIR 19 262 0 348 24 0 0 chr2 70414023 70414064 -182842519 + (TG)n Simple_repeat Simple_repeat 2 42 0 205 178 0 0 chr2 70415566 70415611 -182840972 + T-rich Low_complexity Low_complexity 2 46 0 23 0 0 0 chr2 70415707 70415730 -182840853 + AT_rich Low_complexity Low_complexity 1 23 0 425 310 17 6 chr2 70416136 70416310 -182840273 - L1ME LINE L1 -303 5818 5643 22 0 0 0 chr2 70417650 70417672 -182838911 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr2 70418736 70418761 -182837822 + AT_rich Low_complexity Low_complexity 1 25 0 199 181 48 12 chr2 70419411 70419494 -182837089 + GA-rich Low_complexity Low_complexity 5 90 0 386 268 38 22 chr2 70420336 70420519 -182836064 + MER112 DNA MER1_type 69 254 -6 367 274 62 0 chr2 70420824 70420937 -182835646 - MIR SINE MIR -10 252 133 645 299 215 13 chr2 70421228 70421617 -182834966 - MLT1L LTR MaLR -94 521 66 854 159 74 197 chr2 70422303 70422775 -182833808 - L1MC4 LINE L1 -41 8001 7588 21 0 0 0 chr2 70423302 70423323 -182833260 + AT_rich Low_complexity Low_complexity 1 21 0 1511 204 24 46 chr2 70424677 70425050 -182831533 + MLT1A1 LTR MaLR 1 365 0 1126 214 3 56 chr2 70425153 70425438 -182831145 + L1ME1 LINE L1 5337 5606 -560 1048 162 6 0 chr2 70425438 70425605 -182830978 + FRAM SINE Alu 2 169 -7 1090 220 155 17 chr2 70425605 70425959 -182830624 + L1ME1 LINE L1 5596 5998 -168 780 158 0 16 chr2 70425959 70426086 -182830497 + FLAM_C SINE Alu 1 125 -8 2591 85 126 0 chr2 70426131 70426529 -182830054 + LTR7 LTR ERV1 1 448 -2 20600 94 6 15 chr2 70426531 70429555 -182827028 + HERVH LTR ERV1 1 2995 -4718 5893 87 1 2 chr2 70429534 70430389 -182826194 + HERVH LTR ERV1 3140 3993 -3720 * 4059 151 1 1 chr2 70430391 70431053 -182825530 + HERVH LTR ERV1 4488 5149 -2564 1253 139 23 5 chr2 70431054 70431270 -182825313 + HERVH LTR ERV1 5600 5819 -1894 2007 112 56 6 chr2 70431270 70431338 -182825245 + HERVH LTR ERV1 7324 7387 -326 327 22 0 0 chr2 70431338 70431383 -182825200 - L1PA3 LINE L1 0 6155 6111 2007 112 56 6 chr2 70431383 70431672 -182824911 + HERVH LTR ERV1 7387 7699 -14 48 18 0 0 chr2 70431672 70431727 -182824856 + AT_rich Low_complexity Low_complexity 1 55 0 2670 69 120 22 chr2 70431738 70432146 -182824437 + LTR7 LTR ERV1 1 448 -2 684 189 8 0 chr2 70432148 70432270 -182824313 + FRAM SINE Alu 30 152 -24 487 197 21 12 chr2 70432339 70432471 -182824112 + L1ME1 LINE L1 6022 6148 -18 1453 210 141 46 chr2 70432519 70432980 -182823603 - MLT1D LTR MaLR 0 505 1 2699 156 7 5 chr2 70433169 70433600 -182822983 - MSTB1 LTR MaLR 0 432 1 975 261 17 0 chr2 70433812 70434046 -182822537 - MIR SINE MIR -21 241 4 251 292 0 31 chr2 70434047 70434143 -182822440 + GA-rich Low_complexity Low_complexity 3 95 0 339 267 327 0 chr2 70435551 70435701 -182820882 - MIR SINE MIR -6 256 58 306 375 94 4 chr2 70437505 70437740 -182818843 + L2 LINE L2 1843 2098 -1216 510 286 42 33 chr2 70438103 70438463 -182818120 + L1M4 LINE L1 2234 2596 -3550 27 29 0 0 chr2 70438664 70438698 -182817885 + AT_rich Low_complexity Low_complexity 1 34 0 370 242 72 66 chr2 70438705 70439193 -182817390 + L1M4 LINE L1 2904 3394 -2752 2413 93 0 0 chr2 70439386 70439686 -182816897 - AluSc SINE Alu -9 300 1 374 267 44 0 chr2 70439687 70439777 -182816806 - MIR3 SINE MIR -10 198 105 742 318 43 9 chr2 70439803 70440036 -182816547 - MIR SINE MIR -8 254 14 2220 96 4 0 chr2 70440220 70440501 -182816082 - AluSg SINE Alu -28 282 1 1888 191 69 43 chr2 70440726 70441218 -182815365 + MLT1D LTR MaLR 1 505 0 6846 138 22 12 chr2 70441410 70442622 -182813961 - Tigger3b DNA MER2_type 0 1231 7 340 312 123 0 chr2 70442769 70442907 -182813676 - MIR SINE MIR -51 211 57 310 268 125 18 chr2 70443145 70443257 -182813326 + MIR3 SINE MIR 83 206 -2 24 53 0 0 chr2 70443550 70443588 -182812995 + AT_rich Low_complexity Low_complexity 1 38 0 2581 112 11 8 chr2 70443593 70443967 -182812616 - THE1C LTR MaLR 0 375 1 10040 120 43 3 chr2 70443969 70445485 -182811098 - THE1C-int LTR MaLR -3 1577 1 2121 122 28 19 chr2 70445485 70445845 -182810738 - THE1C LTR MaLR 0 375 13 414 0 0 0 chr2 70445891 70445937 -182810646 + (CA)n Simple_repeat Simple_repeat 2 47 0 266 226 46 31 chr2 70446824 70446948 -182809635 + L1ME LINE L1 5511 5634 -487 306 134 0 0 chr2 70447408 70447475 -182809108 + (TC)n Simple_repeat Simple_repeat 2 68 0 198 0 0 0 chr2 70447475 70447497 -182809086 + (CA)n Simple_repeat Simple_repeat 1 22 0 337 296 14 35 chr2 70447680 70447822 -182808761 - MLT1I LTR MaLR -191 218 80 1409 195 89 11 chr2 70448151 70448433 -182808150 + AluJo SINE Alu 1 304 -8 1820 161 3 17 chr2 70448963 70449261 -182807322 - AluSx SINE Alu -14 298 5 1092 282 33 41 chr2 70450182 70450601 -182805982 - L2 LINE L2 -3 3310 2895 41745 39 1 9 chr2 70450606 70456833 -182799750 + L1PA3 LINE L1 1 6181 0 749 290 82 29 chr2 70456855 70457134 -182799449 - L2 LINE L2 -433 2881 2588 4120 190 66 30 chr2 70457152 70458196 -182798387 - Tigger6a DNA MER2_type 0 1083 2 197 328 66 16 chr2 70458314 70458375 -182798208 + L2 LINE L2 3138 3201 -71 582 273 47 17 chr2 70458407 70458579 -182798004 - MIR SINE MIR -74 188 12 22 0 0 0 chr2 70459493 70459515 -182797068 + AT_rich Low_complexity Low_complexity 1 22 0 1016 269 102 12 chr2 70460323 70460735 -182795848 + HAL1 LINE L1 13 461 -2046 414 231 113 49 chr2 70460753 70461099 -182795484 + HAL1 LINE L1 820 1187 -1320 715 241 110 46 chr2 70461135 70461570 -182795013 - HAL1 LINE L1 -20 2487 2025 * 3508 214 38 1 chr2 70461560 70462376 -182794207 - L1ME1 LINE L1 -1 6976 6131 1811 220 41 99 chr2 70462377 70463036 -182793547 - MLT1E2 LTR MaLR 0 626 6 1765 182 10 16 chr2 70463044 70463221 -182793362 - AluJo SINE Alu -6 306 130 345 24 0 0 chr2 70463221 70463263 -182793320 + (TTG)n Simple_repeat Simple_repeat 2 43 0 1765 182 10 16 chr2 70463263 70463393 -182793190 - AluJo SINE Alu -182 130 1 320 159 0 0 chr2 70463416 70463479 -182793104 - L1ME1 LINE L1 -841 6116 6054 265 246 0 14 chr2 70463485 70463554 -182793029 - MER58 DNA MER1_type 0 2420 2353 540 204 17 3 chr2 70463558 70463676 -182792907 - MER58 DNA MER1_type -107 108 2 317 179 0 26 chr2 70463677 70463755 -182792828 - L1ME1 LINE L1 -902 6055 5980 478 252 30 23 chr2 70463755 70463886 -182792697 + MLT1E LTR MaLR 1 132 -461 909 226 109 8 chr2 70464015 70464263 -182792320 + MLT1E LTR MaLR 317 589 -4 4911 242 50 27 chr2 70464267 70465014 -182791569 - L1ME1 LINE L1 -973 5984 5255 1754 151 37 0 chr2 70465014 70465325 -182791258 - AluSx SINE Alu 0 321 1 4911 242 50 27 chr2 70465325 70466368 -182790215 - L1ME1 LINE L1 -1702 5255 4153 * 6698 34 4 59 chr2 70466363 70467317 -182789266 - L1PA4 LINE L1 0 6155 5254 3213 40 0 2 chr2 70467315 70467741 -182788842 + L1P LINE L1 1986 2410 -3736 * 271 273 21 57 chr2 70468329 70468523 -182788060 - L1ME1 LINE L1 -6653 206 20 265 315 9 9 chr2 70468774 70468885 -182787698 - HAL1 LINE L1 -704 1803 1693 189 0 0 0 chr2 70470151 70470172 -182786411 + (TTG)n Simple_repeat Simple_repeat 1 21 0 5377 156 12 37 chr2 70470563 70471089 -182785494 - L1MA10 LINE L1 -1 6333 5795 2108 132 13 3 chr2 70471089 70471392 -182785191 - AluSq SINE Alu -7 306 1 5377 156 12 37 chr2 70471392 70472162 -182784421 - L1MA10 LINE L1 -539 5795 5070 539 189 135 0 chr2 70472509 70472620 -182783963 + FLAM_A SINE Alu 1 126 -7 546 283 74 75 chr2 70473133 70473460 -182783123 + L1M4 LINE L1 2741 3068 -3078 1659 169 52 85 chr2 70473460 70473835 -182782748 + MSTB1 LTR MaLR 3 362 -70 1937 158 0 13 chr2 70473835 70474145 -182782438 - AluSx SINE Alu -6 306 1 1659 169 52 85 chr2 70474145 70474214 -182782369 + MSTB1 LTR MaLR 362 432 0 546 283 74 75 chr2 70474214 70474416 -182782167 + L1M4 LINE L1 3068 3269 -2877 2428 79 0 25 chr2 70474465 70474781 -182781802 + AluY SINE Alu 1 308 -3 378 318 71 35 chr2 70475016 70475186 -182781397 + MIR SINE MIR 77 252 -10 2310 101 3 10 chr2 70475454 70475761 -182780822 - AluSq SINE Alu -8 305 1 1718 174 60 50 chr2 70475811 70476292 -182780291 - MER31A LTR ERV1 0 661 2 2146 103 0 3 chr2 70476746 70477047 -182779536 - THE1B LTR MaLR 0 364 65 997 189 11 16 chr2 70477099 70477289 -182779294 + MER5A DNA MER1_type 1 189 0 249 243 0 0 chr2 70477437 70477507 -182779076 + (TA)n Simple_repeat Simple_repeat 1 70 0 3127 201 46 31 chr2 70477876 70477910 -182778673 + MER63C DNA MER1_type 2 34 -1026 5920 15 6 3 chr2 70477910 70478593 -182777990 + L1PA3 LINE L1 5471 6155 0 3127 201 46 31 chr2 70478593 70479389 -182777194 + MER63C DNA MER1_type 34 844 -86 2611 136 39 5 chr2 70479482 70479894 -182776689 + MSTB LTR MaLR 1 426 0 710 294 37 20 chr2 70480304 70480549 -182776034 - MIR SINE MIR 0 262 14 370 253 0 0 chr2 70480655 70480742 -182775841 - MER94 DNA DNA -38 96 10 2173 109 0 0 chr2 70481360 70481662 -182774921 - AluY SINE Alu -9 302 1 312 70 0 0 chr2 70482147 70482190 -182774393 + (TG)n Simple_repeat Simple_repeat 2 44 0 1499 146 3 82 chr2 70482480 70482850 -182773733 - AluJo SINE Alu 0 367 21 21 57 0 0 chr2 70483020 70483055 -182773528 + AT_rich Low_complexity Low_complexity 1 35 0 351 214 82 31 chr2 70483391 70483489 -182773094 - MER5A DNA MER1_type -77 112 10 226 287 21 21 chr2 70484813 70484907 -182771676 + L3 LINE CR1 1150 1243 -334 600 214 100 0 chr2 70484907 70485047 -182771536 - MER63 DNA MER1_type 0 1061 908 338 224 13 0 chr2 70485048 70485124 -182771459 + L1MA10 LINE L1 6169 6245 -89 311 129 48 0 chr2 70485297 70485359 -182771224 - L1ME4a LINE L1 -3 6118 6054 23 45 0 60 chr2 70485516 70485583 -182771000 + AT_rich Low_complexity Low_complexity 1 63 0 735 223 96 6 chr2 70485684 70485841 -182770742 - MER5A DNA MER1_type -1 188 18 1396 257 100 74 chr2 70488845 70489381 -182767202 - L1ME3A LINE L1 0 6170 5650 1594 148 95 7 chr2 70489381 70489664 -182766919 - AluJo SINE Alu 0 312 5 1396 257 100 74 chr2 70489664 70490777 -182765806 - L1ME3A LINE L1 -520 5650 4475 1347 61 6 0 chr2 70490786 70490951 -182765632 - AluSg/x SINE Alu -16 293 128 225 0 0 0 chr2 70490951 70490976 -182765607 + (TATG)n Simple_repeat Simple_repeat 2 26 0 390 138 0 0 chr2 70490983 70491048 -182765535 - AluSg/x SINE Alu -17 283 219 1918 80 0 4 chr2 70491048 70491297 -182765286 - AluSg SINE Alu -62 248 1 352 244 119 39 chr2 70491302 70491515 -182765068 - L1 LINE L1 -1674 4472 4244 2188 66 22 47 chr2 70492834 70493153 -182763430 - AluY SINE Alu 0 311 1 309 315 7 57 chr2 70494599 70494767 -182761816 + MIR SINE MIR 38 196 -66 483 172 0 46 chr2 70494865 70494952 -182761631 + AluJ/FLAM SINE Alu 4 86 -226 201 309 186 10 chr2 70496457 70496554 -182760029 - L2 LINE L2 -12 3260 3147 24 53 0 0 chr2 70497105 70497143 -182759440 + AT_rich Low_complexity Low_complexity 1 38 0 372 226 0 0 chr2 70500080 70500142 -182756441 + L2 LINE L2 3205 3266 -6 491 319 159 48 chr2 70500381 70500937 -182755646 + L2 LINE L2 2458 3072 -241 225 196 0 0 chr2 70501230 70501276 -182755307 + (TATATG)n Simple_repeat Simple_repeat 2 47 0 706 284 104 9 chr2 70501309 70501637 -182754946 - L1MC4a LINE L1 -1902 5906 5548 1557 110 26 18 chr2 70501674 70501902 -182754681 + MER30 DNA MER1_type 1 230 0 2356 144 45 26 chr2 70502048 70502472 -182754111 - Tigger2a DNA MER2_type -1 433 2 1267 205 60 30 chr2 70502754 70503085 -182753498 + MER58B DNA MER1_type 1 341 0 193 222 42 111 chr2 70503523 70503595 -182752988 - MER5A DNA MER1_type -24 165 99 262 318 0 0 chr2 70505233 70505296 -182751287 - MIR3 SINE MIR -21 187 125 1823 172 150 0 chr2 70505858 70506219 -182750364 - MER47B DNA MER2_type 0 418 4 241 231 51 0 chr2 70506662 70506740 -182749843 + MER113 DNA MER1_type? 45 126 -395 381 304 131 6 chr2 70507697 70507865 -182748718 - MIR SINE MIR -73 189 1 1575 202 141 17 chr2 70508321 70508781 -182747802 - Charlie1 DNA MER1_type -4 2757 2241 240 250 58 48 chr2 70508781 70508885 -182747698 + L1MEc LINE L1 63 167 -6229 * 2828 241 78 27 chr2 70508883 70509083 -182747500 + L1MEc LINE L1 1751 1939 -4276 4139 191 94 8 chr2 70509083 70510079 -182746504 + Tigger6a DNA MER2_type 2 1083 0 2828 241 78 27 chr2 70510079 70511263 -182745320 + L1MEc LINE L1 1939 3245 -2970 614 252 0 0 chr2 70511263 70511382 -182745201 + FLAM_A SINE Alu 1 119 -14 2828 241 78 27 chr2 70511382 70511690 -182744893 + L1MEc LINE L1 3245 3536 -2679 1923 201 27 23 chr2 70511720 70511737 -182744846 + L1MB8 LINE L1 4855 4870 -1276 1134 209 212 12 chr2 70511737 70512067 -182744516 - MSTD LTR MaLR 0 396 1 1923 201 27 23 chr2 70512067 70512526 -182744057 + L1MB8 LINE L1 4870 5333 -813 2113 136 105 10 chr2 70512529 70512920 -182743663 - MSTA LTR MaLR 0 428 1 3857 128 24 14 chr2 70512920 70513559 -182743024 - MSTA-int LTR MaLR 0 1580 936 226 186 0 0 chr2 70513562 70513605 -182742978 + L1MB8 LINE L1 5438 5480 -2562 1766 175 78 58 chr2 70513614 70513815 -182742768 - MSTB1 LTR MaLR -13 419 223 1442 207 57 0 chr2 70513815 70513930 -182742653 + AluJb SINE Alu 1 108 -204 477 0 0 0 chr2 70513930 70513983 -182742600 + (CA)n Simple_repeat Simple_repeat 2 54 0 1442 207 57 0 chr2 70513983 70514147 -182742436 + AluJb SINE Alu 108 296 -16 1766 175 78 58 chr2 70514147 70514356 -182742227 - MSTB1 LTR MaLR -209 223 1 288 235 165 0 chr2 70514356 70514441 -182742142 + L1MB8 LINE L1 5480 5581 -581 453 221 36 116 chr2 70514447 70514657 -182741926 + L1MB8 LINE L1 5921 6105 -73 772 163 8 0 chr2 70514657 70514786 -182741797 - FLAM_C SINE Alu -3 130 1 453 221 36 116 chr2 70514786 70514851 -182741732 + L1MB8 LINE L1 6105 6174 -4 2696 204 85 17 chr2 70514859 70515555 -182741028 - Charlie1 DNA MER1_type -499 2262 1520 * 5252 118 9 19 chr2 70515551 70516329 -182740254 + Tigger1 DNA MER2_type 1444 2216 -202 1758 143 37 0 chr2 70516329 70516668 -182739915 - AluSx SINE Alu 0 349 1 5252 118 9 19 chr2 70516668 70516733 -182739850 + Tigger1 DNA MER2_type 2216 2280 -138 986 164 0 0 chr2 70516798 70516950 -182739633 + Tigger1 DNA MER2_type 2267 2418 0 21 0 0 0 chr2 70516968 70516989 -182739594 + AT_rich Low_complexity Low_complexity 1 21 0 1795 266 82 61 chr2 70517213 70517746 -182738837 - L1ME LINE L1 -4821 2120 1600 2144 117 0 19 chr2 70517746 70518063 -182738520 - AluSx SINE Alu 0 312 2 1795 266 82 61 chr2 70518063 70518734 -182737849 - L1ME LINE L1 -5341 1600 896 755 185 8 0 chr2 70519026 70519156 -182737427 + FLAM_A SINE Alu 1 131 -2 2061 155 0 0 chr2 70519523 70519833 -182736750 - AluSx SINE Alu 0 312 3 25 0 0 0 chr2 70519899 70519924 -182736659 + AT_rich Low_complexity Low_complexity 1 25 0 28 79 0 0 chr2 70520013 70520076 -182736507 + AT_rich Low_complexity Low_complexity 1 63 0 1159 112 6 0 chr2 70520226 70520395 -182736188 - L1PA10 LINE L1 -1 6167 5998 1425 107 0 0 chr2 70520827 70521014 -182735569 + AluSx SINE Alu 1 187 -125 29 28 0 0 chr2 70521053 70521089 -182735494 + AT_rich Low_complexity Low_complexity 1 36 0 303 27 0 0 chr2 70522081 70522118 -182734465 - L1PA10 LINE L1 -298 5856 5820 441 276 25 94 chr2 70522118 70522321 -182734262 + MLT1K LTR MaLR 289 477 -111 23 78 0 0 chr2 70522325 70522376 -182734207 + AT_rich Low_complexity Low_complexity 1 51 0 499 215 54 0 chr2 70522516 70522646 -182733937 + Tigger8 DNA MER2_type 170 306 -360 25 0 0 0 chr2 70522680 70522705 -182733878 + AT_rich Low_complexity Low_complexity 1 25 0 2191 93 31 0 chr2 70522707 70522998 -182733585 - AluSg SINE Alu -10 300 1 265 143 41 0 chr2 70523316 70523365 -182733218 + MLT1J LTR MaLR 424 474 -37 528 319 91 42 chr2 70523387 70523467 -182733116 - L1M4 LINE L1 -2254 3892 3817 3049 164 35 12 chr2 70523467 70524058 -182732525 + MER6A DNA MER2_type 1 605 0 528 319 91 42 chr2 70524058 70524426 -182732157 - L1M4 LINE L1 -2329 3817 3422 449 243 77 77 chr2 70524428 70524653 -182731930 + L1MEc LINE L1 1844 2071 -4325 1490 195 13 20 chr2 70524653 70524951 -182731632 - AluJo SINE Alu -16 296 1 449 243 77 77 chr2 70524951 70525104 -182731479 + L1MEc LINE L1 2070 2222 -4174 * 767 227 87 0 chr2 70525100 70525307 -182731276 - L1ME LINE L1 -6168 255 31 385 338 84 28 chr2 70525332 70525616 -182730967 - L1M4 LINE L1 -3644 2502 2203 321 291 29 35 chr2 70526034 70526206 -182730377 - HAL1b LINE L1 -457 891 721 447 234 68 73 chr2 70526273 70526465 -182730118 - HAL1b LINE L1 -744 604 414 1784 131 3 44 chr2 70526563 70526880 -182729703 - AluSx SINE Alu 0 307 3 225 253 18 53 chr2 70527042 70527212 -182729371 + T-rich Low_complexity Low_complexity 3 166 0 22 35 0 0 chr2 70528316 70528345 -182728238 + AT_rich Low_complexity Low_complexity 1 29 0 661 300 92 4 chr2 70528432 70528682 -182727901 + Tigger8 DNA MER2_type 37 308 -358 375 226 212 34 chr2 70530174 70530320 -182726263 + MER5B DNA MER1_type 7 178 0 356 224 0 0 chr2 70530635 70530702 -182725881 + MLT1F LTR MaLR 1 67 -475 286 317 10 0 chr2 70530704 70530805 -182725778 + CT-rich Low_complexity Low_complexity 1 102 0 889 206 130 0 chr2 70530805 70531028 -182725555 + MLT1F LTR MaLR 170 421 -121 183 156 0 0 chr2 70533823 70533855 -182722728 + (CAT)n Simple_repeat Simple_repeat 3 34 0 2207 122 0 0 chr2 70534168 70534463 -182722120 + AluSx SINE Alu 1 295 -17 28 48 0 0 chr2 70534568 70534610 -182721973 + AT_rich Low_complexity Low_complexity 1 42 0 572 305 76 27 chr2 70534889 70535112 -182721471 + MIR SINE MIR 29 262 0 877 334 62 22 chr2 70535152 70535685 -182720898 + L2 LINE L2 2424 2977 -337 61 27 0 0 chr2 70535693 70535768 -182720815 + AT_rich Low_complexity Low_complexity 1 75 0 235 175 53 0 chr2 70535768 70535825 -182720758 - L1MA1 LINE L1 0 6302 6243 677 307 61 4 chr2 70536503 70536734 -182719849 + MIR SINE MIR 8 251 -11 276 305 82 26 chr2 70536834 70537103 -182719480 + L1ME LINE L1 5060 5343 -803 402 296 257 8 chr2 70537128 70537381 -182719202 + L1ME LINE L1 5367 5682 -480 815 278 42 34 chr2 70537393 70537746 -182718837 - MLT1I LTR MaLR 0 409 54 3476 202 23 44 chr2 70538161 70539063 -182717520 - MLT1D-int LTR MaLR -488 883 1 1009 171 66 86 chr2 70539063 70539320 -182717263 - MLT1D LTR MaLR 0 505 216 250 296 72 42 chr2 70539484 70539748 -182716835 - L1ME LINE L1 -303 5818 5547 309 271 42 76 chr2 70542531 70542675 -182713908 + MIR SINE MIR 48 186 -76 23 54 0 0 chr2 70542685 70542722 -182713861 + AT_rich Low_complexity Low_complexity 1 37 0 301 178 52 22 chr2 70542879 70543014 -182713569 + (TA)n Simple_repeat Simple_repeat 2 140 0 1324 231 82 88 chr2 70543793 70543870 -182712713 + MLT1G LTR MaLR 37 113 -477 1572 195 276 32 chr2 70543870 70544438 -182712145 + MER39 LTR ERV1 1 707 0 1324 231 82 88 chr2 70544438 70544566 -182712017 + MLT1G LTR MaLR 113 240 -350 2290 94 0 7 chr2 70544566 70544874 -182711709 + AluSc SINE Alu 3 308 -1 1324 231 82 88 chr2 70544874 70545225 -182711358 + MLT1G LTR MaLR 240 590 0 3592 174 92 35 chr2 70545241 70546050 -182710533 - MER21B LTR ERV1 -3 860 6 806 250 15 66 chr2 70546063 70546335 -182710248 + MLT1H LTR MaLR 115 372 -177 24 32 0 0 chr2 70546399 70546430 -182710153 + AT_rich Low_complexity Low_complexity 1 31 0 743 176 21 14 chr2 70546430 70546572 -182710011 - FRAM SINE Alu -33 143 1 948 304 57 9 chr2 70546661 70546996 -182709587 + L2 LINE L2 1712 2062 -1252 2334 114 3 0 chr2 70546999 70547305 -182709278 - AluSp SINE Alu -6 307 1 1478 246 55 18 chr2 70547378 70547760 -182708823 - L2 LINE L2 -14 3299 2904 185 100 50 0 chr2 70547840 70547880 -182708703 + A-rich Low_complexity Low_complexity 2 43 0 836 276 61 67 chr2 70548075 70548520 -182708063 + L2 LINE L2 2154 2595 -719 333 47 0 0 chr2 70548658 70548701 -182707882 + (TA)n Simple_repeat Simple_repeat 2 44 0 2356 97 0 0 chr2 70552551 70552850 -182703733 - AluSx SINE Alu -13 299 1 1836 118 3 90 chr2 70553728 70554074 -182702509 - AluSx SINE Alu 0 312 1 389 321 8 15 chr2 70555914 70556045 -182700538 + MIR SINE MIR 20 149 -113 252 0 0 0 chr2 70556045 70556073 -182700510 + (TC)n Simple_repeat Simple_repeat 2 29 0 207 0 0 0 chr2 70556072 70556095 -182700488 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 333 0 0 0 chr2 70556094 70556131 -182700452 + (TG)n Simple_repeat Simple_repeat 2 38 0 675 228 175 21 chr2 70556239 70556428 -182700155 - MIR SINE MIR -31 231 14 233 250 0 0 chr2 70556461 70556513 -182700070 + (TTA)n Simple_repeat Simple_repeat 1 52 0 953 192 0 6 chr2 70556890 70557057 -182699526 + FAM SINE Alu 1 42 -7 180 0 0 0 chr2 70560129 70560149 -182696434 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 780 214 31 54 chr2 70560518 70560652 -182695931 + MIR SINE MIR 15 144 -118 2324 88 0 3 chr2 70560652 70560947 -182695636 + AluY SINE Alu 1 294 -17 780 214 31 54 chr2 70560947 70561036 -182695547 + MIR SINE MIR 144 233 -29 221 154 0 0 chr2 70561312 70561351 -182695232 + (TG)n Simple_repeat Simple_repeat 2 40 0 371 364 118 14 chr2 70561812 70562092 -182694491 + L2 LINE L2 2576 2884 -430 2174 83 0 0 chr2 70562238 70562535 -182694048 + AluSc SINE Alu 15 311 0 1898 163 0 23 chr2 70564729 70565035 -182691548 - AluSx SINE Alu -13 299 1 213 224 0 0 chr2 70565973 70566022 -182690561 + (CAT)n Simple_repeat Simple_repeat 1 49 0 382 322 7 14 chr2 70567267 70567413 -182689170 - MER5A DNA MER1_type -41 148 4 210 263 92 26 chr2 70567558 70567634 -182688949 - MIR SINE MIR -84 124 44 2282 97 0 3 chr2 70568451 70568760 -182687823 - AluY SINE Alu -3 308 1 315 296 163 10 chr2 70569871 70570067 -182686516 - MIR SINE MIR -36 226 1 21 36 0 0 chr2 70570194 70570222 -182686361 + AT_rich Low_complexity Low_complexity 1 28 0 274 258 0 0 chr2 70571411 70571473 -182685110 + (TG)n Simple_repeat Simple_repeat 1 62 0 200 158 35 70 chr2 70572950 70573007 -182683576 - MIR3 SINE MIR -16 192 138 2290 108 0 0 chr2 70573455 70573750 -182682833 - AluSg SINE Alu -15 295 1 334 205 118 31 chr2 70575384 70575511 -182681072 + L1ME LINE L1 5689 5826 -295 6402 24 0 4 chr2 70575511 70576352 -182680231 + L1PA3 LINE L1 5203 6040 -115 2491 46 0 16 chr2 70576452 70576775 -182679808 + L1PA3 LINE L1 5835 6152 -3 14575 137 25 1 chr2 70576925 70579285 -182677298 + Tigger1 DNA MER2_type 1 2417 -1 1718 154 9 42 chr2 70579339 70579670 -182676913 + MER7A DNA MER2_type 28 345 -1 1607 185 0 32 chr2 70579698 70580011 -182676572 + AluJo SINE Alu 1 303 -9 243 88 0 0 chr2 70580108 70580142 -182676441 + (A)n Simple_repeat Simple_repeat 1 34 0 226 277 62 0 chr2 70580249 70580314 -182676269 + LTR67 LTR ERVL 85 153 -404 * 268 167 21 0 chr2 70580276 70580324 -182676259 + MLT1J LTR MaLR 110 158 -353 222 37 0 0 chr2 70580686 70580713 -182675870 + (TCTCTG)n Simple_repeat Simple_repeat 2 28 0 21 0 0 0 chr2 70580797 70580818 -182675765 + AT_rich Low_complexity Low_complexity 1 21 0 921 176 29 29 chr2 70580893 70581098 -182675485 - L1MB8 LINE L1 -1 6177 5973 332 276 52 15 chr2 70581101 70581235 -182675348 - L1MB8 LINE L1 -1983 5825 5687 313 282 14 84 chr2 70581331 70581473 -182675110 + MER91A DNA MER1_type 22 153 -43 765 321 4 33 chr2 70581559 70581590 -182674993 - L2 LINE L2 -455 2859 2829 2154 120 35 41 chr2 70581590 70581956 -182674627 + THE1B LTR MaLR 1 364 0 765 321 4 33 chr2 70581956 70582195 -182674388 - L2 LINE L2 -485 2829 2597 1360 237 62 54 chr2 70582687 70583184 -182673399 + MLT1D LTR MaLR 5 505 0 239 289 86 39 chr2 70583516 70583644 -182672939 + MIR SINE MIR 78 211 -51 297 240 173 10 chr2 70583797 70583901 -182672682 - MIR SINE MIR -13 249 129 291 193 18 18 chr2 70583901 70583958 -182672625 + L2 LINE L2 3237 3293 -20 223 310 84 0 chr2 70585566 70585637 -182670946 - MIR SINE MIR -85 123 47 207 0 0 0 chr2 70586475 70586498 -182670085 + (TAAA)n Simple_repeat Simple_repeat 4 26 0 401 273 7 14 chr2 70586634 70586777 -182669806 - MER69 DNA AcHobo -5 2521 2380 2107 114 24 3 chr2 70586894 70587184 -182669399 - AluSc SINE Alu -9 300 5 359 323 26 19 chr2 70587600 70587755 -182668828 + MIR SINE MIR 61 216 -46 503 287 15 46 chr2 70588253 70588448 -182668135 + MIR SINE MIR 40 228 -34 1056 188 31 45 chr2 70588639 70588862 -182667721 - AluJo SINE Alu -10 302 83 2550 40 0 40 chr2 70589189 70589512 -182667071 + AluY SINE Alu 1 310 -1 203 174 0 43 chr2 70590100 70590146 -182666437 + G-rich Low_complexity Low_complexity 4 47 0 264 243 57 14 chr2 70594388 70594458 -182662125 - L2 LINE L2 -16 3297 3225 214 191 0 95 chr2 70594874 70594937 -182661646 + L2 LINE L2 3201 3257 -56 1814 160 52 19 chr2 70596317 70596680 -182659903 + THE1C LTR MaLR 1 375 0 1197 208 50 26 chr2 70598571 70598874 -182657709 + MER2 DNA MER2_type 35 344 -1 2757 85 3 0 chr2 70598909 70599263 -182657320 + THE1A LTR MaLR 1 355 0 865 166 69 37 chr2 70599748 70599965 -182656618 + THE1C LTR MaLR 1 224 -151 9649 30 3 0 chr2 70599989 70601912 -182654671 - L1PA4 LINE L1 -1 6154 4229 10468 35 0 1 chr2 70601912 70603247 -182653336 + L1PA4 LINE L1 2907 4239 -1907 893 124 4 14 chr2 70603248 70603394 -182653189 + THE1C LTR MaLR 237 373 -2 204 264 92 11 chr2 70604079 70604166 -182652417 + L2 LINE L2 3164 3257 -56 593 206 0 0 chr2 70604386 70604493 -182652090 + Tigger3(Golem) DNA MER2_type 1 107 -2922 3804 138 34 16 chr2 70604498 70605230 -182651353 + Tigger3(Golem) DNA MER2_type 2284 3028 -1 214 186 0 0 chr2 70606031 70606074 -182650509 + (TAA)n Simple_repeat Simple_repeat 2 44 0 1449 172 88 37 chr2 70607624 70607921 -182648662 + AluJo SINE Alu 1 312 0 206 357 122 0 chr2 70607992 70608090 -182648493 - L3 LINE CR1 -39 1538 1429 1399 153 18 25 chr2 70608276 70608550 -182648033 - MER2 DNA MER2_type -23 322 51 1980 130 50 10 chr2 70609052 70609353 -182647230 + AluSp SINE Alu 1 313 0 292 300 0 0 chr2 70612529 70612629 -182643954 + LTR58 LTR ERV1 350 449 -230 2097 166 82 7 chr2 70612938 70613367 -182643216 - LOR1b LTR ERV1 0 461 1 1951 146 3 3 chr2 70613413 70613700 -182642883 - AluJo SINE Alu -25 287 1 830 249 82 9 chr2 70613817 70614050 -182642533 - MIR SINE MIR -11 251 2 207 0 0 0 chr2 70614447 70614470 -182642113 + (CA)n Simple_repeat Simple_repeat 2 24 0 583 220 101 0 chr2 70614823 70614991 -182641592 - L1MD3 LINE L1 -17 7978 7794 191 36 36 0 chr2 70617002 70617030 -182639553 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 239 224 106 47 chr2 70617489 70617574 -182639009 - L2 LINE L2 -24 3289 3200 244 371 132 0 chr2 70619818 70619977 -182636606 - MIR SINE MIR -73 189 10 26 30 0 0 chr2 70620078 70620111 -182636472 + AT_rich Low_complexity Low_complexity 1 33 0 248 111 22 0 chr2 70620353 70620398 -182636185 + T-rich Low_complexity Low_complexity 4 49 0 4253 181 50 19 chr2 70621649 70623216 -182633367 + L1MC1 LINE L1 4427 6042 -291 467 176 134 55 chr2 70623360 70623524 -182633059 + MER66A LTR ERV1 97 263 -223 2270 95 0 0 chr2 70623554 70623850 -182632733 + AluY SINE Alu 7 302 -9 1616 159 7 21 chr2 70623854 70624065 -182632518 + L1MC1 LINE L1 6041 6248 -85 2251 90 96 12 chr2 70624065 70624105 -182632478 - THE1B LTR MaLR -1 363 328 1591 124 0 9 chr2 70624105 70624331 -182632252 + AluSg/x SINE Alu 87 310 -2 2251 90 96 12 chr2 70624331 70624625 -182631958 - THE1B LTR MaLR -36 328 1 1616 159 7 21 chr2 70624625 70624703 -182631880 + L1MC1 LINE L1 6248 6326 -7 5727 187 61 16 chr2 70624929 70626313 -182630270 + Charlie1a DNA MER1_type 6 1452 -3 814 301 28 15 chr2 70626572 70626897 -182629686 - LTR16C LTR ERVL 0 491 163 381 319 11 0 chr2 70627058 70627243 -182629340 - L1ME3A LINE L1 -254 5916 5730 463 309 106 32 chr2 70627502 70627845 -182628738 + L1MC4a LINE L1 5571 5941 -229 320 169 48 16 chr2 70627859 70627983 -182628600 + (TA)n Simple_repeat Simple_repeat 1 128 0 746 147 6 0 chr2 70628098 70628255 -182628328 + (TAGA)n Simple_repeat Simple_repeat 4 161 0 736 349 130 36 chr2 70628607 70629842 -182626741 + L2 LINE L2 1534 2884 -430 193 304 54 0 chr2 70629948 70630004 -182626579 + L2 LINE L2 3118 3176 -96 657 223 30 6 chr2 70630407 70630573 -182626010 + MIR SINE MIR 93 262 0 11021 205 22 21 chr2 70630966 70631428 -182625155 - L1PB3 LINE L1 -2 6209 5749 2230 116 52 84 chr2 70631428 70631868 -182624715 + MSTA LTR MaLR 3 428 0 11021 205 22 21 chr2 70631868 70635375 -182621208 - L1PB3 LINE L1 -462 5749 2173 1330 223 27 27 chr2 70635375 70635675 -182620908 - AluJo SINE Alu -12 300 1 11021 205 22 21 chr2 70635675 70637850 -182618733 - L1PB3 LINE L1 -4038 2173 2 622 253 16 33 chr2 70637849 70638031 -182618552 - L1PA15-16 LINE L1 -5257 1593 1415 * 286 333 11 2 chr2 70638362 70638508 -182618075 - L1M2b LINE L1 -6694 515 21 * 1324 310 57 60 chr2 70638504 70640078 -182616505 - L1PA15-16 LINE L1 -5419 1430 3 2867 113 0 0 chr2 70640146 70640510 -182616073 - THE1B LTR MaLR 0 364 1 11388 107 36 8 chr2 70640510 70642046 -182614537 - THE1B-int LTR MaLR 0 1580 1 2830 115 0 0 chr2 70642046 70642410 -182614173 - THE1B LTR MaLR 0 364 1 2150 98 0 7 chr2 70644358 70644683 -182611900 - AluSx SINE Alu 0 323 1 673 302 5 15 chr2 70644925 70645127 -182611456 - MIR SINE MIR -48 214 15 466 231 10 0 chr2 70645731 70645835 -182610748 - L2 LINE L2 -1039 2275 2171 417 218 82 45 chr2 70646002 70646112 -182610471 + L2 LINE L2 3200 3313 0 316 297 29 22 chr2 70646172 70646310 -182610273 - L2 LINE L2 0 3313 3175 609 262 27 22 chr2 70646348 70646531 -182610052 + LTR16A1 LTR ERVL 274 457 0 268 122 82 20 chr2 70647174 70647272 -182609311 + (TA)n Simple_repeat Simple_repeat 1 104 0 33 0 0 0 chr2 70647280 70647313 -182609270 + AT_rich Low_complexity Low_complexity 1 33 0 2084 90 0 0 chr2 70647313 70647580 -182609003 + AluSc SINE Alu 34 300 -9 207 374 10 10 chr2 70647645 70647744 -182608839 - L2 LINE L2 -565 2749 2651 2202 232 47 52 chr2 70648411 70648624 -182607959 + MLT1E LTR MaLR 3 216 -377 2224 139 19 33 chr2 70648624 70648990 -182607593 - MLT1A1 LTR MaLR -4 361 1 2202 232 47 52 chr2 70648990 70649370 -182607213 + MLT1E LTR MaLR 216 593 0 187 357 32 24 chr2 70650439 70650565 -182606018 + MIR SINE MIR 21 147 -61 546 249 51 11 chr2 70651970 70652147 -182604436 - MIR SINE MIR 0 262 79 730 213 152 0 chr2 70652193 70652357 -182604226 - MER5A DNA MER1_type 0 189 1 243 0 0 0 chr2 70654459 70654486 -182602097 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2376 75 10 0 chr2 70654488 70654780 -182601803 - AluY SINE Alu -16 295 1 1159 176 37 23 chr2 70654944 70655160 -182601423 - MER20 DNA MER1_type 0 219 1 740 218 31 21 chr2 70657065 70657258 -182599325 + L1ME3A LINE L1 5974 6168 -2 703 187 193 7 chr2 70658006 70658156 -182598427 - MER5B DNA MER1_type 0 178 1 465 262 48 37 chr2 70658478 70658665 -182597918 + MIR SINE MIR 58 246 -16 183 347 77 45 chr2 70658775 70658997 -182597586 + L3b LINE CR1 1269 1497 -86 264 100 0 0 chr2 70659436 70659476 -182597107 + L2 LINE L2 3268 3307 -6 493 278 0 15 chr2 70661009 70661142 -182595441 - L2 LINE L2 0 3313 3183 1638 213 98 55 chr2 70661145 70661615 -182594968 - MLT1F1 LTR MaLR -7 560 71 905 328 49 10 chr2 70661668 70662255 -182594328 - L2 LINE L2 -124 3189 2571 262 210 185 76 chr2 70664241 70664398 -182592185 + MER5B DNA MER1_type 4 187 -2 1066 261 159 46 chr2 70666026 70666524 -182590059 + MLT1G1 LTR MaLR 2 555 0 22 0 0 0 chr2 70666592 70666614 -182589969 + AT_rich Low_complexity Low_complexity 1 22 0 400 303 45 8 chr2 70666698 70666830 -182589753 + L2 LINE L2 3150 3286 -27 223 93 47 0 chr2 70669631 70669674 -182586909 + (TAA)n Simple_repeat Simple_repeat 2 46 0 2309 114 0 0 chr2 70669737 70670044 -182586539 + AluY SINE Alu 1 307 -4 1679 230 17 19 chr2 70671397 70671758 -182584825 - MLT1A1 LTR MaLR -2 363 4 2221 93 4 0 chr2 70672128 70672467 -182584116 + AluSg1 SINE Alu 1 340 0 3025 178 86 9 chr2 70672733 70673170 -182583413 + L1MD2 LINE L1 5681 6182 -177 189 0 0 0 chr2 70673170 70673191 -182583392 + (CA)n Simple_repeat Simple_repeat 2 22 0 3025 178 86 9 chr2 70673191 70673384 -182583199 + L1MD2 LINE L1 6182 6359 0 344 320 48 14 chr2 70673750 70673897 -182582686 - MER5A DNA MER1_type -1 188 37 23 0 0 0 chr2 70674847 70674870 -182581713 + AT_rich Low_complexity Low_complexity 1 23 0 215 95 32 48 chr2 70675712 70675775 -182580808 + (TATG)n Simple_repeat Simple_repeat 2 63 0 799 263 36 24 chr2 70676093 70676340 -182580243 - L2 LINE L2 -9 3304 3055 11860 186 39 19 chr2 70676341 70677161 -182579422 + L1PA15-16 LINE L1 1009 1810 -5039 2309 111 7 0 chr2 70677161 70677468 -182579115 + AluSx SINE Alu 1 309 -3 11860 186 39 19 chr2 70677468 70678490 -182578093 + L1PA15-16 LINE L1 1810 2809 -4040 1788 160 33 16 chr2 70678490 70678797 -182577786 + AluJb SINE Alu 1 312 0 11860 186 39 19 chr2 70678797 70679815 -182576768 + L1PA15-16 LINE L1 2809 3804 -3045 300 27 0 0 chr2 70679815 70679852 -182576731 + (CA)n Simple_repeat Simple_repeat 2 38 0 11860 186 39 19 chr2 70679852 70680837 -182575746 + L1PA15-16 LINE L1 3804 4968 -1881 1490 273 188 33 chr2 70680847 70681581 -182575002 - L2 LINE L2 -338 2976 2129 3086 273 76 14 chr2 70681596 70683736 -182572847 - L1MCa LINE L1 -879 5250 2842 36879 89 9 5 chr2 70683739 70689849 -182566734 + L1PA6 LINE L1 11 6154 0 2828 227 28 4 chr2 70689858 70690803 -182565780 - L1MCa LINE L1 -3267 2862 1896 1194 257 40 38 chr2 70690782 70691316 -182565267 - L1MCa LINE L1 -1963 4166 3621 * 752 274 129 23 chr2 70691490 70691816 -182564767 - L1MCa LINE L1 -2846 3283 2993 350 192 26 0 chr2 70691816 70691894 -182564689 - MER116 DNA Mariner 0 80 1 752 274 129 23 chr2 70691894 70692232 -182564351 - L1MCa LINE L1 -3136 2993 2548 1361 170 5 0 chr2 70692287 70692510 -182564073 - AluJb SINE Alu -88 224 1 31 58 0 0 chr2 70692715 70692767 -182563816 + AT_rich Low_complexity Low_complexity 1 52 0 373 293 83 44 chr2 70692767 70692996 -182563587 - L1MCa LINE L1 -3799 2330 2093 379 291 51 46 chr2 70693500 70693696 -182562887 - HAL1 LINE L1 -941 1566 1370 230 222 56 22 chr2 70693696 70693786 -182562797 - L1MCa LINE L1 -4866 1253 1161 879 279 93 26 chr2 70693808 70694195 -182562388 - MLT1J1 LTR MaLR -28 418 6 336 266 74 83 chr2 70694202 70694661 -182561922 - L1MCa LINE L1 -4970 1149 695 300 309 12 0 chr2 70694669 70694750 -182561833 - L1MCa LINE L1 -5494 625 544 2848 150 47 4 chr2 70695080 70695546 -182561037 - MER66B LTR ERV1 0 486 1 357 358 66 59 chr2 70695799 70696070 -182560513 + L2 LINE L2 3000 3272 0 251 294 56 48 chr2 70697067 70697193 -182559390 + MIR SINE MIR 20 146 -62 476 111 12 0 chr2 70697424 70697505 -182559078 + (TGGA)n Simple_repeat Simple_repeat 3 84 0 24 32 0 0 chr2 70697729 70697760 -182558823 + AT_rich Low_complexity Low_complexity 1 31 0 1022 300 74 12 chr2 70698132 70698537 -182558046 + L2 LINE L2 2774 3202 -111 490 347 46 16 chr2 70699113 70699525 -182557058 - MLT1L LTR MaLR -36 563 122 1349 205 73 66 chr2 70700179 70700754 -182555829 - L1MC5 LINE L1 -74 7887 7309 257 316 243 0 chr2 70701425 70701561 -182555022 - MIR3 SINE MIR -38 170 2 251 308 42 50 chr2 70702455 70702575 -182554008 - L2 LINE L2 -16 3297 3179 1925 197 6 6 chr2 70702832 70703187 -182553396 - MLT1A1 LTR MaLR 0 365 11 261 98 0 0 chr2 70703837 70703878 -182552705 + (CA)n Simple_repeat Simple_repeat 1 41 0 216 0 0 0 chr2 70704599 70704623 -182551960 + (A)n Simple_repeat Simple_repeat 1 24 0 282 132 0 0 chr2 70704667 70704720 -182551863 + (TAGA)n Simple_repeat Simple_repeat 1 53 0 649 324 40 5 chr2 70706230 70706452 -182550131 - MIR SINE MIR 0 262 33 187 135 108 0 chr2 70706485 70706522 -182550061 + MIR SINE MIR 222 262 0 31 0 0 0 chr2 70706522 70706553 -182550030 + AT_rich Low_complexity Low_complexity 1 31 0 1370 157 4 17 chr2 70706562 70706797 -182549786 + MER46A DNA MER2_type 1 232 -4 1886 198 14 38 chr2 70706958 70707382 -182549201 + MLT2D LTR ERVL 1 414 0 215 237 316 26 chr2 70709117 70709231 -182547352 + L2 LINE L2 3164 3310 -3 21 0 0 0 chr2 70709234 70709255 -182547328 + AT_rich Low_complexity Low_complexity 1 21 0 258 268 21 31 chr2 70709707 70709804 -182546779 + MIR3 SINE MIR 111 206 -2 1802 137 0 4 chr2 70709907 70710178 -182546405 - AluSg SINE Alu -17 293 24 720 227 208 5 chr2 70710294 70710501 -182546082 - MIR SINE MIR -9 253 5 526 273 61 25 chr2 70710994 70711192 -182545391 + MIR SINE MIR 48 252 -10 1062 254 53 80 chr2 70713306 70713743 -182542840 - L2 LINE L2 0 3313 2889 284 211 61 35 chr2 70713744 70713858 -182542725 + L1MA8 LINE L1 6175 6291 0 1016 303 85 20 chr2 70713874 70714323 -182542260 - L2 LINE L2 -481 2833 2356 743 310 123 49 chr2 70714334 70714872 -182541711 + L3 LINE CR1 941 1575 -2 23 0 0 0 chr2 70715025 70715048 -182541535 + AT_rich Low_complexity Low_complexity 1 23 0 214 265 133 12 chr2 70715304 70715387 -182541196 + MIR SINE MIR 170 262 0 242 170 132 0 chr2 70715539 70715592 -182540991 + MIR3 SINE MIR 130 189 -19 231 233 41 27 chr2 70715607 70715680 -182540903 + MARNA DNA Mariner 355 428 -158 477 301 85 38 chr2 70715682 70716094 -182540489 + L1ME4a LINE L1 4288 4716 -1430 222 149 0 21 chr2 70716349 70716396 -182540187 + (TAAAA)n Simple_repeat Simple_repeat 1 46 0 267 239 15 0 chr2 70716452 70716519 -182540064 - LTR16B LTR ERVL 0 464 397 1914 191 79 19 chr2 70716521 70716951 -182539632 - MLT1C LTR MaLR -10 457 2 530 333 42 19 chr2 70717034 70717298 -182539285 - LTR16B LTR ERVL -194 270 1 672 266 92 50 chr2 70717385 70717821 -182538762 + L1ME4a LINE L1 5404 5857 -264 21 36 0 0 chr2 70717821 70717849 -182538734 + AT_rich Low_complexity Low_complexity 1 28 0 2524 71 0 0 chr2 70717849 70718160 -182538423 - AluY SINE Alu 0 311 1 8265 107 12 3 chr2 70718160 70720154 -182536429 - L1PA8A LINE L1 -8 6123 4111 326 381 14 27 chr2 70724046 70724193 -182532390 + MIR SINE MIR 3 147 -115 291 247 49 12 chr2 70724367 70724448 -182532135 - MLT1J2 LTR MaLR -205 245 162 1114 169 140 68 chr2 70724896 70725175 -182531408 + AluSx SINE Alu 1 299 -3 373 229 51 61 chr2 70726241 70726399 -182530184 + LTR50 LTR ERVL 1 130 -393 398 321 0 19 chr2 70726844 70726950 -182529633 + MIR SINE MIR 32 135 -73 740 314 4 25 chr2 70726973 70727215 -182529368 - MIR SINE MIR -8 254 18 290 283 88 0 chr2 70727224 70727337 -182529246 + MIR SINE MIR 139 261 -1 240 279 124 23 chr2 70728375 70728504 -182528079 - L2 LINE L2 -3 3310 3169 251 342 33 20 chr2 70728638 70728790 -182527793 - L2 LINE L2 -435 2879 2726 383 371 18 18 chr2 70730261 70730431 -182526152 - MIR3 SINE MIR -9 199 30 2409 32 0 0 chr2 70730798 70731082 -182525501 - L1PA4 LINE L1 -96 6059 5776 533 128 0 49 chr2 70731082 70731157 -182525426 + L1PA2 LINE L1 6058 6147 -8 270 73 0 0 chr2 70731157 70731198 -182525385 + (CATA)n Simple_repeat Simple_repeat 2 42 0 301 364 77 18 chr2 70731341 70731561 -182525022 - L3 LINE CR1 -1 1576 1344 186 339 34 0 chr2 70732019 70732078 -182524505 - L2 LINE L2 -74 3198 3138 211 331 35 72 chr2 70732386 70732676 -182523907 + L2 LINE L2 2827 3105 -167 329 207 9 0 chr2 70732765 70732881 -182523702 + GA-rich Low_complexity Low_complexity 1 117 0 1290 185 74 22 chr2 70733834 70734134 -182522449 - MER58B DNA MER1_type 0 341 2 594 269 55 6 chr2 70734339 70734521 -182522062 - MIR SINE MIR -52 210 20 193 298 9 61 chr2 70734704 70734818 -182521765 + L2 LINE L2 2952 3059 -213 318 238 143 16 chr2 70736005 70736131 -182520452 + MIR SINE MIR 79 220 -42 377 258 92 35 chr2 70737396 70737625 -182518958 + L1ME4a LINE L1 5880 6121 0 826 192 60 12 chr2 70738406 70738573 -182518010 - MER58B DNA MER1_type 0 341 167 21 36 0 0 chr2 70738573 70738601 -182517982 + AT_rich Low_complexity Low_complexity 1 28 0 222 277 62 54 chr2 70739098 70739228 -182517355 - L2 LINE L2 -2 3270 3140 470 271 6 54 chr2 70741092 70741258 -182515325 - MER52A LTR ERV1 0 1755 1598 725 274 18 69 chr2 70741261 70741538 -182515045 - MER52A LTR ERV1 -285 1470 1208 911 196 192 109 chr2 70741558 70742141 -182514442 - MER52A LTR ERV1 -147 971 283 21 57 0 0 chr2 70742427 70742462 -182514121 + AT_rich Low_complexity Low_complexity 1 35 0 225 101 70 23 chr2 70742464 70742593 -182513990 + (TA)n Simple_repeat Simple_repeat 2 136 0 367 254 82 37 chr2 70742650 70742784 -182513799 - MIR3 SINE MIR -49 159 20 337 297 71 26 chr2 70743087 70743242 -182513341 - MER103 DNA DNA -4 162 1 204 301 108 24 chr2 70743495 70743578 -182513005 + MIR SINE MIR 49 138 -124 1615 208 62 19 chr2 70746858 70747229 -182509354 + L1ME3 LINE L1 5428 5814 -348 866 227 78 19 chr2 70747233 70747489 -182509094 + L1ME3 LINE L1 5886 6156 -6 192 40 0 0 chr2 70747496 70747521 -182509062 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1142 293 42 40 chr2 70747561 70748182 -182508401 + L2 LINE L2 2684 3305 -8 180 265 0 20 chr2 70748254 70748303 -182508280 + MIR3 SINE MIR 10 57 -151 19664 53 0 12 chr2 70748867 70751309 -182505274 + L1P LINE L1 3 2415 -3731 207 0 0 0 chr2 70751524 70751547 -182505036 + (A)n Simple_repeat Simple_repeat 1 23 0 946 311 60 32 chr2 70753131 70753933 -182502650 + L2 LINE L2 2463 3295 -18 5071 252 51 19 chr2 70753988 70755827 -182500756 - L1MEc LINE L1 -4425 1971 37 4460 105 8 0 chr2 70756131 70756733 -182499850 - L1PA13 LINE L1 -1 6162 5556 366 299 56 65 chr2 70757122 70757336 -182499247 + L2 LINE L2 2920 3131 -182 1840 183 27 20 chr2 70757369 70757773 -182498810 - L1MB2 LINE L1 -16 6155 5749 634 311 60 6 chr2 70757911 70758166 -182498417 - MIR SINE MIR -1 261 3 188 268 52 72 chr2 70758641 70758738 -182497845 + MIR3 SINE MIR 114 208 0 671 264 20 10 chr2 70758889 70759086 -182497497 + MIR SINE MIR 56 254 -8 1600 178 0 4 chr2 70759529 70759787 -182496796 - L1P3 LINE L1 -6195 266 10 579 120 0 65 chr2 70759796 70759888 -182496695 + AluJo SINE Alu 47 132 -180 207 0 0 0 chr2 70760729 70760752 -182495831 + (A)n Simple_repeat Simple_repeat 1 23 0 406 299 37 70 chr2 70761523 70761737 -182494846 + L2 LINE L2 3066 3272 0 183 146 0 0 chr2 70761737 70761778 -182494805 + (TGGA)n Simple_repeat Simple_repeat 2 42 0 203 167 0 0 chr2 70761802 70761838 -182494745 + A-rich Low_complexity Low_complexity 6 41 0 212 265 0 0 chr2 70762492 70762541 -182494042 + CT-rich Low_complexity Low_complexity 3 51 0 1612 96 4 26 chr2 70764371 70764600 -182491983 - L1PA16 LINE L1 0 6166 5943 2127 193 38 51 chr2 70765058 70765530 -182491053 - MLT1C LTR MaLR 0 467 2 919 180 70 0 chr2 70765547 70765719 -182490864 + AluJo SINE Alu 128 311 -1 402 115 0 0 chr2 70766581 70766642 -182489941 + (TG)n Simple_repeat Simple_repeat 2 62 0 284 268 98 88 chr2 70767661 70767866 -182488717 - MIR SINE MIR -48 214 8 24 32 0 0 chr2 70769114 70769145 -182487438 + AT_rich Low_complexity Low_complexity 1 31 0 738 306 51 50 chr2 70769687 70770233 -182486350 + L1ME4a LINE L1 5574 6120 -1 703 200 15 0 chr2 70770362 70770497 -182486086 - AluJb SINE Alu -1 311 175 238 306 242 8 chr2 70770636 70770760 -182485823 + MIR3 SINE MIR 35 187 -21 431 282 36 0 chr2 70771629 70771739 -182484844 - MIR SINE MIR -115 147 34 1903 157 16 3 chr2 70771893 70772199 -182484384 - AluJo SINE Alu -2 310 1 230 284 0 45 chr2 70772522 70772589 -182483994 - MIR3 SINE MIR -7 201 138 234 370 20 0 chr2 70772626 70772726 -182483857 - MIR SINE MIR -62 146 45 * 327 338 40 0 chr2 70772722 70772873 -182483710 - MIR SINE MIR -24 238 82 30 0 0 0 chr2 70773256 70773286 -182483297 + AT_rich Low_complexity Low_complexity 1 30 0 2355 89 0 0 chr2 70773837 70774139 -182482444 + AluY SINE Alu 1 302 -9 219 362 36 29 chr2 70774397 70774535 -182482048 + L2 LINE L2 3133 3271 -1 969 216 125 16 chr2 70774554 70774950 -182481633 + L1MCa LINE L1 2105 2582 -3947 363 23 0 0 chr2 70774998 70775042 -182481541 + (CA)n Simple_repeat Simple_repeat 1 44 0 2199 118 0 0 chr2 70775070 70775359 -182481224 + AluSg SINE Alu 1 289 -21 740 194 114 96 chr2 70776141 70776465 -182480118 + Charlie8 DNA MER1_type 79 408 -2009 2028 120 27 0 chr2 70776733 70777025 -182479558 + MLT2A2 LTR ERVL 1 300 -153 273 75 0 0 chr2 70777639 70777679 -182478904 + (CA)n Simple_repeat Simple_repeat 1 40 0 326 301 144 74 chr2 70777692 70778018 -182478565 + L2 LINE L2 2919 3267 -5 272 190 35 17 chr2 70779955 70780013 -182476570 + ORSL DNA AcHobo 1 59 -216 258 231 0 0 chr2 70780013 70780078 -182476505 + (TA)n Simple_repeat Simple_repeat 1 65 0 1299 178 17 9 chr2 70780082 70780312 -182476271 + MER46A DNA MER2_type 5 236 0 249 138 138 0 chr2 70780318 70780383 -182476200 + ORSL DNA AcHobo 62 135 -140 2773 108 3 16 chr2 70780383 70780763 -182475820 + THE1C LTR MaLR 1 375 0 10821 121 40 11 chr2 70780763 70782299 -182474284 + THE1C-int LTR MaLR 1 1580 0 2105 133 64 17 chr2 70782302 70782647 -182473936 + THE1C LTR MaLR 15 375 0 796 216 0 25 chr2 70782647 70782793 -182473790 + ORSL DNA AcHobo 134 275 0 314 279 47 0 chr2 70783426 70783512 -182473071 - MIR SINE MIR -111 151 62 254 296 40 44 chr2 70786645 70786807 -182469776 + MER5A DNA MER1_type 29 178 0 209 347 14 0 chr2 70789726 70789798 -182466785 - L2 LINE L2 -4 3268 3196 * 539 293 55 102 chr2 70789789 70790658 -182465925 + L2 LINE L2 2285 3106 -207 933 265 14 0 chr2 70790701 70790916 -182465667 + MIR SINE MIR 4 221 -41 384 343 0 0 chr2 70790979 70791081 -182465502 + L2 LINE L2 3171 3272 0 538 204 241 7 chr2 70791149 70791286 -182465297 - MER5A DNA MER1_type -10 179 11 219 36 0 0 chr2 70792624 70792652 -182463931 + (A)n Simple_repeat Simple_repeat 1 28 0 1484 109 18 27 chr2 70793989 70794209 -182462374 + MER20 DNA MER1_type 2 219 0 504 222 94 0 chr2 70794467 70794584 -182461999 + MER94 DNA DNA 5 132 -2 970 155 27 21 chr2 70795434 70795621 -182460962 - MER53 DNA DNA -1 188 1 2629 58 0 3 chr2 70796271 70796583 -182460000 - AluY SINE Alu 0 311 1 23 0 0 0 chr2 70796644 70796667 -182459916 + AT_rich Low_complexity Low_complexity 1 23 0 225 65 0 0 chr2 70797323 70797354 -182459229 + (TC)n Simple_repeat Simple_repeat 1 31 0 235 379 35 9 chr2 70798194 70798310 -182458273 + MIR3 SINE MIR 69 187 -21 572 248 157 0 chr2 70799259 70799412 -182457171 - MER5A DNA MER1_type 0 189 13 849 174 54 0 chr2 70800076 70800225 -182456358 - L1PA3 LINE L1 -5 6150 5994 237 300 17 0 chr2 70800231 70800291 -182456292 - L2 LINE L2 -14 3299 3239 2032 276 106 31 chr2 70801355 70801517 -182455066 + L2 LINE L2 626 774 -2540 558 276 11 54 chr2 70801517 70801572 -182455011 + MER5B DNA MER1_type 2 58 -120 222 37 0 0 chr2 70801572 70801599 -182454984 + (TTG)n Simple_repeat Simple_repeat 2 28 0 558 276 11 54 chr2 70801599 70801728 -182454855 + MER5B DNA MER1_type 58 178 0 2032 276 106 31 chr2 70801728 70802046 -182454537 + L2 LINE L2 774 1067 -2247 1404 285 67 6 chr2 70802046 70802537 -182454046 - LTR33 LTR ERVL 0 521 1 2032 276 106 31 chr2 70802537 70802988 -182453595 + L2 LINE L2 1067 1628 -1686 605 299 100 42 chr2 70803070 70803401 -182453182 + L2 LINE L2 2941 3290 -23 431 231 39 0 chr2 70803584 70803688 -182452895 + MIR SINE MIR 39 146 -116 1090 251 69 46 chr2 70804541 70804932 -182451651 + MLT1J LTR MaLR 111 510 -1 306 0 0 0 chr2 70805560 70805594 -182450989 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 1672 183 0 31 chr2 70805596 70805886 -182450697 - AluJo SINE Alu -30 282 2 326 356 2 0 chr2 70807188 70807305 -182449278 - MIR SINE MIR -89 119 1 2414 137 10 37 chr2 70807684 70808085 -182448498 - MLT1B LTR MaLR 0 390 1 3227 101 5 16 chr2 70808521 70808968 -182447615 + L1PB2 LINE L1 5708 6149 -2 267 230 49 62 chr2 70809013 70809253 -182447330 + L1MC/D LINE L1 5293 5514 -741 214 349 68 15 chr2 70810207 70810339 -182446244 - L2 LINE L2 -323 2990 2852 325 250 14 0 chr2 70810414 70810486 -182446097 + FRAM/FAM SINE Alu 1 65 -101 35675 68 9 8 chr2 70810486 70815993 -182440590 - L1PA6 LINE L1 -4 6150 645 3054 161 22 41 chr2 70817297 70817879 -182438704 - L1MD3 LINE L1 -21 7974 7404 342 245 11 43 chr2 70817879 70817973 -182438610 - MLT1F1 LTR MaLR -442 125 35 254 260 0 0 chr2 70817974 70818047 -182438536 - L1MD3 LINE L1 -880 7115 7043 21 0 0 0 chr2 70818436 70818457 -182438126 + AT_rich Low_complexity Low_complexity 1 21 0 2017 102 16 33 chr2 70819258 70819563 -182437020 + AluSq SINE Alu 1 300 -13 307 331 54 15 chr2 70819718 70819848 -182436735 + L2 LINE L2 3168 3302 -11 21 36 0 0 chr2 70820502 70820530 -182436053 + AT_rich Low_complexity Low_complexity 1 28 0 2368 81 7 0 chr2 70820849 70821146 -182435437 - AluY SINE Alu -12 299 1 27 0 0 0 chr2 70821965 70821992 -182434591 + AT_rich Low_complexity Low_complexity 1 27 0 274 299 43 33 chr2 70822542 70822710 -182433873 - MIR SINE MIR -50 212 41 182 246 116 14 chr2 70823995 70824064 -182432519 - MIR SINE MIR -98 110 35 21 0 0 0 chr2 70825105 70825126 -182431457 + AT_rich Low_complexity Low_complexity 1 21 0 545 103 36 45 chr2 70826883 70827564 -182429019 + (CA)n Simple_repeat Simple_repeat 1 674 0 673 91 23 40 chr2 70827639 70827815 -182428768 + (CA)n Simple_repeat Simple_repeat 1 173 0 466 138 16 58 chr2 70827876 70828064 -182428519 + (CA)n Simple_repeat Simple_repeat 1 180 0 419 238 99 29 chr2 70828949 70829121 -182427462 + MER102a DNA MER1_type 137 320 -10 911 188 7 0 chr2 70830142 70830296 -182426287 - MER45A DNA AcHobo -2 176 22 693 301 62 9 chr2 70831415 70831641 -182424942 + MIR SINE MIR 15 252 -10 2151 108 0 0 chr2 70832782 70833080 -182423503 - AluSc SINE Alu 0 298 1 1491 160 42 19 chr2 70833764 70834076 -182422507 - MER33 DNA MER1_type 0 324 6 553 198 0 29 chr2 70834316 70834488 -182422095 + CT-rich Low_complexity Low_complexity 2 168 0 368 233 0 9 chr2 70834518 70834634 -182421949 + CT-rich Low_complexity Low_complexity 1 115 0 1282 251 21 46 chr2 70834635 70835152 -182421431 - L1MCa LINE L1 -5127 1299 796 383 232 34 62 chr2 70835278 70835455 -182421128 + L1ME3A LINE L1 3821 3992 -2154 22 35 0 0 chr2 70835456 70835485 -182421098 + AT_rich Low_complexity Low_complexity 1 29 0 10022 207 19 8 chr2 70835510 70839904 -182416679 + L1P5 LINE L1 6 6507 -360 313 302 0 28 chr2 70839921 70840027 -182416556 + L1MC4 LINE L1 6601 6703 -1339 * 314 283 54 0 chr2 70839985 70840077 -182416506 - L1MC4 LINE L1 -1339 6703 6607 * 321 219 0 62 chr2 70840057 70840153 -182416430 + L1MC4 LINE L1 6614 6703 -1339 210 219 41 0 chr2 70840153 70840180 -182416403 + (TA)n Simple_repeat Simple_repeat 2 26 -51 2232 140 5 8 chr2 70840180 70840551 -182416032 + L1PB1 LINE L1 5782 6151 0 210 219 41 0 chr2 70840551 70840596 -182415987 + (TA)n Simple_repeat Simple_repeat 26 77 0 272 259 138 93 chr2 70840603 70841823 -182414760 + L1ME3A LINE L1 4032 5306 -840 189 150 17 33 chr2 70841825 70841885 -182414698 + GA-rich Low_complexity Low_complexity 2 60 0 1954 141 0 26 chr2 70841921 70842225 -182414358 + AluSg SINE Alu 1 296 -14 1113 290 77 4 chr2 70842245 70842794 -182413789 + L1ME3A LINE L1 5353 5941 -229 3306 262 73 34 chr2 70843675 70845428 -182411155 + L1ME1 LINE L1 92 1913 -4483 * 4233 214 78 14 chr2 70845426 70847425 -182409158 + L1ME1 LINE L1 4109 6223 -12 286 340 107 0 chr2 70849340 70849443 -182407140 + L2 LINE L2 3200 3313 0 206 57 0 29 chr2 70849681 70849687 -182406896 + (GGAA)n Simple_repeat Simple_repeat 3 8 -28 2201 105 16 0 chr2 70849687 70849992 -182406591 + AluSp SINE Alu 1 310 -3 206 57 0 29 chr2 70849992 70850020 -182406563 + (GGAA)n Simple_repeat Simple_repeat 8 36 0 189 0 0 0 chr2 70851843 70851864 -182404719 + (TG)n Simple_repeat Simple_repeat 2 22 0 195 218 0 0 chr2 70852322 70852377 -182404206 + G-rich Low_complexity Low_complexity 2 56 0 204 288 90 27 chr2 70853413 70853524 -182403059 - MIR3 SINE MIR -32 176 59 432 0 0 0 chr2 70854046 70854094 -182402489 + (TG)n Simple_repeat Simple_repeat 1 48 0 215 152 45 15 chr2 70854591 70854657 -182401926 + GA-rich Low_complexity Low_complexity 1 68 0 558 292 66 52 chr2 70855074 70855213 -182401370 + L2 LINE L2 2568 2704 -610 14112 29 2 1 chr2 70855213 70857648 -182398935 + L1PA3 LINE L1 3710 6148 -7 189 0 0 0 chr2 70857648 70857669 -182398914 + (TTAA)n Simple_repeat Simple_repeat 3 23 0 558 292 66 52 chr2 70857678 70857901 -182398682 + L2 LINE L2 2704 2935 -379 350 303 130 12 chr2 70858075 70858237 -182398346 + L2 LINE L2 3133 3313 0 211 194 0 0 chr2 70858944 70858980 -182397603 + GA-rich Low_complexity Low_complexity 1 36 0 468 302 33 54 chr2 70859336 70859840 -182396743 + MLT1L LTR MaLR 34 615 0 949 220 94 90 chr2 70862988 70863433 -182393150 + MLT1D LTR MaLR 21 481 0 248 210 129 0 chr2 70863507 70863569 -182393014 - L2 LINE L2 -4 3309 3240 606 316 62 27 chr2 70864927 70865376 -182391207 + MLT1K LTR MaLR 118 582 -6 627 265 98 55 chr2 70865983 70866512 -182390071 + L1ME4a LINE L1 5562 6113 -8 391 318 167 16 chr2 70867716 70867961 -182388622 - L2 LINE L2 -6 3266 2985 206 323 57 57 chr2 70867972 70868164 -182388419 - MIR SINE MIR -51 211 20 2480 47 0 10 chr2 70869189 70869488 -182387095 + AluY SINE Alu 1 296 -15 817 131 15 8 chr2 70869557 70869687 -182386896 + FLAM_C SINE Alu 1 131 -2 2909 101 9 14 chr2 70872090 70872356 -182384227 - L1PA15 LINE L1 -2 6163 5898 1586 59 15 0 chr2 70872356 70872559 -182384024 - AluY SINE Alu -1 310 105 2909 101 9 14 chr2 70872559 70872738 -182383845 - L1PA15 LINE L1 -267 5898 5720 239 330 30 10 chr2 70872759 70872859 -182383724 + MIR SINE MIR 45 146 -62 583 304 55 24 chr2 70874280 70874533 -182382050 - L2 LINE L2 -5 3308 3048 675 290 107 48 chr2 70874655 70874799 -182381784 - L2 LINE L2 -561 2753 2619 1856 166 39 30 chr2 70874799 70874949 -182381634 + MLT1A1 LTR MaLR 1 148 -217 2170 100 0 0 chr2 70874949 70875255 -182381328 + AluSg1 SINE Alu 1 306 0 1856 166 39 30 chr2 70875255 70875465 -182381118 + MLT1A1 LTR MaLR 148 365 0 675 290 107 48 chr2 70875465 70875610 -182380973 - L2 LINE L2 -695 2619 2447 2195 134 0 0 chr2 70875684 70875990 -182380593 - AluSx SINE Alu -5 307 2 360 266 16 5 chr2 70876001 70876125 -182380458 + MER5A DNA MER1_type 8 189 0 207 88 29 0 chr2 70876142 70876176 -182380407 + (GGA)n Simple_repeat Simple_repeat 2 36 0 181 365 16 0 chr2 70876191 70876254 -182380329 - MIR SINE MIR -151 111 48 217 238 0 0 chr2 70876480 70876522 -182380061 + (TG)n Simple_repeat Simple_repeat 2 43 0 21 0 0 0 chr2 70879249 70879270 -182377313 + AT_rich Low_complexity Low_complexity 1 21 0 610 322 48 0 chr2 70882043 70882270 -182374313 - MIR SINE MIR -3 259 22 192 250 150 0 chr2 70882816 70882876 -182373707 - MIR3 SINE MIR -54 154 86 313 287 124 23 chr2 70884044 70884173 -182372410 - MIR SINE MIR -101 161 20 505 280 68 68 chr2 70885105 70885487 -182371096 - MLT1J2 LTR MaLR -2 448 67 2374 126 22 0 chr2 70885499 70885855 -182370728 + THE1B LTR MaLR 1 364 0 207 245 0 0 chr2 70886016 70886065 -182370518 - L2 LINE L2 -3 3310 3262 271 303 202 0 chr2 70886894 70886983 -182369600 - L2 LINE L2 -12 3260 3154 251 323 63 39 chr2 70887267 70887394 -182369189 + MER5A DNA MER1_type 1 130 -59 287 321 71 9 chr2 70887470 70887582 -182369001 - MER5B DNA MER1_type 0 178 60 523 295 66 63 chr2 70888740 70889150 -182367433 + HAL1 LINE L1 583 993 -1514 1167 260 72 18 chr2 70889166 70889678 -182366905 + HAL1 LINE L1 1029 1568 -939 645 179 82 125 chr2 70889871 70890151 -182366432 + LTR41 LTR ERVL 506 773 0 1013 240 92 117 chr2 70890161 70890417 -182366166 + HAL1 LINE L1 1665 1926 -581 2301 87 0 0 chr2 70890417 70890705 -182365878 + AluSg1 SINE Alu 1 288 -21 1013 240 92 117 chr2 70890705 70891298 -182365285 + HAL1 LINE L1 1926 2493 -14 49 18 0 0 chr2 70891407 70891463 -182365120 + AT_rich Low_complexity Low_complexity 1 56 0 253 299 0 0 chr2 70891500 70891567 -182365016 + (CATATA)n Simple_repeat Simple_repeat 6 72 0 406 90 13 26 chr2 70891977 70892055 -182364528 + (TAGA)n Simple_repeat Simple_repeat 3 79 0 318 323 175 0 chr2 70892513 70892736 -182363847 + MIR SINE MIR 1 262 0 284 302 108 3 chr2 70892826 70892953 -182363630 - MIR SINE MIR -58 150 18 411 271 75 108 chr2 70893072 70893286 -182363297 + MIR3 SINE MIR 1 207 -1 501 290 54 17 chr2 70893523 70893703 -182362880 - MIR3 SINE MIR -17 191 3 188 291 18 0 chr2 70894294 70894349 -182362234 - L2 LINE L2 -1 3271 3216 180 125 0 0 chr2 70894613 70894645 -182361938 + (TA)n Simple_repeat Simple_repeat 1 32 0 30 0 0 0 chr2 70894652 70894682 -182361901 + AT_rich Low_complexity Low_complexity 1 30 0 371 218 36 18 chr2 70894714 70894824 -182361759 - L1MC5 LINE L1 -44 7917 7806 198 0 0 0 chr2 70894840 70894862 -182361721 + (A)n Simple_repeat Simple_repeat 1 22 0 351 217 85 78 chr2 70894891 70895020 -182361563 - MER94 DNA DNA 0 134 5 230 307 0 13 chr2 70895423 70895498 -182361085 + LTR33A LTR ERVL 444 517 -6 224 320 0 27 chr2 70895959 70896034 -182360549 + L2 LINE L2 3241 3313 0 1063 162 52 57 chr2 70896138 70896348 -182360235 - MER3 DNA MER1_type 0 209 1 497 303 90 17 chr2 70896528 70896624 -182359959 - MIR SINE MIR 0 262 174 1293 191 70 49 chr2 70896624 70896953 -182359630 + MER46C DNA MER2_type 3 338 0 497 303 90 17 chr2 70896953 70897090 -182359493 - MIR SINE MIR -88 174 12 314 287 92 0 chr2 70899178 70899265 -182357318 + MIR SINE MIR 3 97 -165 224 157 20 20 chr2 70899265 70899316 -182357267 + MIR SINE MIR 212 262 0 562 201 85 6 chr2 70899485 70899649 -182356934 + MER104 DNA MER2_type 3 179 -1 2795 196 17 6 chr2 70900100 70900619 -182355964 + L1M1 LINE L1 1069 1593 -5972 * 3340 192 20 46 chr2 70900617 70900891 -182355692 + L1M1 LINE L1 3942 4222 -3343 2254 58 0 41 chr2 70900891 70901182 -182355401 + AluY SINE Alu 28 306 -5 3340 192 20 46 chr2 70901182 70901594 -182354989 + L1M1 LINE L1 4222 4607 -2958 2232 112 0 3 chr2 70901594 70901890 -182354693 + AluSx SINE Alu 3 297 -15 3340 192 20 46 chr2 70901890 70902000 -182354583 + L1M1 LINE L1 4607 4718 -2847 1368 163 0 0 chr2 70902000 70902209 -182354374 - Ricksha_c DNA DNA -717 1329 1121 2174 112 3 0 chr2 70902263 70902550 -182354033 + AluSx SINE Alu 2 289 -23 1836 141 29 10 chr2 70902846 70903152 -182353431 + AluJo SINE Alu 1 312 0 224 233 0 0 chr2 70903166 70903209 -182353374 + MIR SINE MIR 58 100 -162 263 259 0 0 chr2 70904763 70904821 -182351762 - MER5A DNA MER1_type -84 105 48 381 249 164 28 chr2 70905856 70906069 -182350514 + MIR SINE MIR 21 262 0 238 254 32 0 chr2 70906399 70906462 -182350121 + MLT1L LTR MaLR 1 65 -550 576 281 42 103 chr2 70906507 70906866 -182349717 + MLT1J LTR MaLR 156 492 -19 26 0 0 0 chr2 70907047 70907073 -182349510 + AT_rich Low_complexity Low_complexity 1 26 0 283 202 0 131 chr2 70907665 70907848 -182348735 - AluJb SINE Alu -6 296 138 32 43 0 0 chr2 70908044 70908090 -182348493 + AT_rich Low_complexity Low_complexity 1 46 0 330 87 0 0 chr2 70908775 70908821 -182347762 + (CAGA)n Simple_repeat Simple_repeat 2 47 0 2257 88 34 0 chr2 70909155 70909452 -182347131 + AluSp SINE Alu 1 307 -6 2180 105 0 0 chr2 70909839 70910115 -182346468 - AluSq SINE Alu -37 276 1 1202 258 66 62 chr2 70910115 70910294 -182346289 - L1ME4a LINE L1 -227 5894 5717 1900 161 0 13 chr2 70910294 70910604 -182345979 + AluJo SINE Alu 5 310 -2 1202 258 66 62 chr2 70910604 70911125 -182345458 - L1ME4a LINE L1 -404 5717 5180 396 257 69 4 chr2 70911437 70911612 -182344971 + MIR SINE MIR 7 260 -2 348 24 0 0 chr2 70913702 70913743 -182342840 + (A)n Simple_repeat Simple_repeat 1 41 0 417 85 0 17 chr2 70916128 70916187 -182340396 + MER53 DNA DNA 1 58 -131 * 545 83 475 0 chr2 70916151 70916271 -182340312 - MER53 DNA DNA -12 177 1 1004 159 33 11 chr2 70917380 70917562 -182339021 + MER5A DNA MER1_type 4 189 0 324 120 0 0 chr2 70917784 70917834 -182338749 + (CA)n Simple_repeat Simple_repeat 1 50 0 478 124 0 34 chr2 70921675 70921764 -182334819 + L1PB3 LINE L1 6067 6152 -2 31 26 0 0 chr2 70921768 70921806 -182334777 + AT_rich Low_complexity Low_complexity 1 38 0 2548 108 8 45 chr2 70921902 70922280 -182334303 - THE1B LTR MaLR 0 364 1 267 216 20 0 chr2 70923053 70923104 -182333479 - L2 LINE L2 -10 3303 3252 765 179 75 0 chr2 70923114 70923248 -182333335 - MER46A DNA MER2_type -90 146 3 728 166 175 57 chr2 70923116 70923327 -182333256 + MER46A DNA MER2_type 1 236 0 * 226 236 257 20 chr2 70923358 70923506 -182333077 - MIR SINE MIR -60 202 20 388 214 113 75 chr2 70924793 70924901 -182331682 - MER5B DNA MER1_type -13 165 48 2080 135 6 3 chr2 70924901 70925213 -182331370 - AluSp SINE Alu 0 313 1 388 214 113 75 chr2 70925213 70925263 -182331320 - MER5B DNA MER1_type -130 48 1 233 0 62 0 chr2 70925832 70925864 -182330719 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 1341 187 10 74 chr2 70925867 70926166 -182330417 - AluJo SINE Alu -30 282 3 844 149 22 15 chr2 70926167 70926301 -182330282 - AluJo SINE Alu -176 136 2 1928 99 8 4 chr2 70926341 70926593 -182329990 + AluSx SINE Alu 33 285 -27 387 0 0 0 chr2 70926593 70926636 -182329947 + (CA)n Simple_repeat Simple_repeat 2 44 0 232 143 36 0 chr2 70926929 70926985 -182329598 + (TGGA)n Simple_repeat Simple_repeat 3 60 0 235 273 15 0 chr2 70927153 70927219 -182329364 - MLT1K LTR MaLR 0 588 522 249 250 16 16 chr2 70927546 70927610 -182328973 - MLT1K LTR MaLR -345 243 180 478 193 0 0 chr2 70928385 70928468 -182328115 + MER5A DNA MER1_type 26 108 -81 1070 172 10 15 chr2 70928851 70929054 -182327529 + AluJb SINE Alu 85 286 -26 2187 99 41 0 chr2 70929191 70929485 -182327098 - AluSg SINE Alu 0 310 5 417 315 20 7 chr2 70929534 70929680 -182326903 - MIR3 SINE MIR -27 181 34 235 234 50 119 chr2 70930736 70930954 -182325629 + L1ME3A LINE L1 5968 6170 0 1975 129 59 78 chr2 70931930 70932302 -182324281 - MLT1A1 LTR MaLR 0 365 1 2057 136 3 0 chr2 70932898 70933192 -182323391 + AluSx SINE Alu 1 295 -17 620 194 89 0 chr2 70933202 70933382 -182323201 - Charlie1 DNA MER1_type -60 2701 2506 279 137 41 0 chr2 70933620 70933693 -182322890 + (TAGA)n Simple_repeat Simple_repeat 1 76 0 231 114 0 0 chr2 70933697 70933732 -182322851 + (CATA)n Simple_repeat Simple_repeat 2 36 0 363 297 8 8 chr2 70933753 70933871 -182322712 - L1MC4a LINE L1 -1879 5929 5812 592 249 254 0 chr2 70934028 70934217 -182322366 - MIR SINE MIR -23 239 3 451 265 185 15 chr2 70934375 70934575 -182322008 - MIR SINE MIR -25 237 4 336 181 48 0 chr2 70935671 70935776 -182320807 + (TATATG)n Simple_repeat Simple_repeat 2 111 0 2004 133 0 0 chr2 70935851 70936136 -182320447 + AluSx SINE Alu 1 285 -27 264 77 0 0 chr2 70936136 70936175 -182320408 + (CA)n Simple_repeat Simple_repeat 2 40 0 194 339 0 0 chr2 70937081 70937140 -182319443 + L2 LINE L2 3213 3271 -1 222 191 0 0 chr2 70938354 70938396 -182318187 + GA-rich Low_complexity Low_complexity 2 43 0 552 56 0 0 chr2 70938398 70938470 -182318113 + (GGAA)n Simple_repeat Simple_repeat 4 75 0 361 250 14 20 chr2 70938690 70938838 -182317745 + CT-rich Low_complexity Low_complexity 1 147 0 581 212 18 6 chr2 70939151 70939321 -182317262 + CT-rich Low_complexity Low_complexity 1 172 0 400 302 42 33 chr2 70939986 70940201 -182316382 + L1ME4a LINE L1 5687 5903 -218 22 0 0 0 chr2 70941787 70941809 -182314774 + AT_rich Low_complexity Low_complexity 1 22 0 1205 163 131 17 chr2 70941876 70942173 -182314410 + MER33 DNA MER1_type 1 324 0 531 271 105 84 chr2 70943735 70944126 -182312457 - MLT1J LTR MaLR 0 511 113 198 330 20 20 chr2 70945422 70945522 -182311061 + MIR3 SINE MIR 103 202 -6 216 135 0 0 chr2 70946333 70946370 -182310213 + (ATG)n Simple_repeat Simple_repeat 1 37 0 443 256 105 50 chr2 70946375 70946594 -182309989 - MIR SINE MIR 0 262 32 505 290 13 13 chr2 70947699 70947854 -182308729 + MIR3 SINE MIR 3 157 -51 222 297 128 27 chr2 70948111 70948259 -182308324 + MIR SINE MIR 3 165 -97 543 242 63 63 chr2 70948269 70948459 -182308124 - MER63A DNA MER1_type -20 190 1 289 338 0 0 chr2 70948459 70948539 -182308044 + MIR SINE MIR 158 237 -25 185 321 0 48 chr2 70948719 70948803 -182307780 - L2 LINE L2 -6 3307 3228 2308 221 119 27 chr2 70950240 70950826 -182305757 + L1 LINE L1 3656 4187 -1959 2309 112 0 6 chr2 70950826 70951138 -182305445 - AluSg SINE Alu 0 310 1 2134 108 3 46 chr2 70951142 70951466 -182305117 - AluSq SINE Alu -3 310 1 2308 221 119 27 chr2 70951466 70951624 -182304959 + L1 LINE L1 4189 4474 -1672 8301 49 115 7 chr2 70951729 70952842 -182303741 - L1P LINE L1 -4528 1618 386 1569 130 74 39 chr2 70953263 70953547 -182303036 + LTR10A LTR ERV1 255 548 -61 215 40 0 0 chr2 70953689 70953714 -182302869 + (T)n Simple_repeat Simple_repeat 1 25 0 3165 137 28 38 chr2 70953838 70954372 -182302211 + LTR26B LTR ERV1 1 529 -2 1973 135 3 14 chr2 70954911 70955208 -182301375 + AluSx SINE Alu 1 294 -18 342 98 0 0 chr2 70956794 70956845 -182299738 + (TA)n Simple_repeat Simple_repeat 2 52 0 441 0 0 0 chr2 70956895 70956944 -182299639 + (TA)n Simple_repeat Simple_repeat 2 50 0 1038 251 140 33 chr2 70958205 70958669 -182297914 - MLT1G1 LTR MaLR -12 583 69 2836 152 2 2 chr2 70958682 70959130 -182297453 + L1PA15 LINE L1 5717 6164 -1 30 0 0 0 chr2 70959130 70959160 -182297423 + AT_rich Low_complexity Low_complexity 1 30 0 1300 142 81 45 chr2 70959161 70959407 -182297176 + AluSg SINE Alu 39 293 -17 1284 128 0 17 chr2 70959436 70959616 -182296967 + AluSx SINE Alu 1 177 -135 1579 106 0 10 chr2 70959716 70959924 -182296659 - AluSq SINE Alu -107 206 1 1848 148 3 3 chr2 70960214 70960498 -182296085 + AluJo SINE Alu 1 284 -28 1786 186 53 66 chr2 70960803 70961291 -182295292 - MER31A LTR ERV1 -3 482 1 867 282 103 18 chr2 70961330 70961660 -182294923 + MLT1K LTR MaLR 231 588 0 320 171 195 0 chr2 70961809 70961891 -182294692 + LTR10A LTR ERV1 1 98 -511 280 314 35 0 chr2 70962519 70962605 -182293978 - MER5C DNA MER1_type -219 105 17 448 246 90 8 chr2 70962788 70962922 -182293661 - MIR3 SINE MIR -37 171 27 2154 105 3 14 chr2 70963062 70963377 -182293206 + AluSg SINE Alu 1 312 0 646 314 139 0 chr2 70963608 70963917 -182292666 + L3 LINE CR1 1114 1465 -112 709 218 69 0 chr2 70963939 70964113 -182292470 - MER53 DNA DNA -3 186 1 319 319 39 95 chr2 70965847 70966185 -182290398 + L2 LINE L2 2941 3259 -13 2883 193 25 5 chr2 70966186 70966781 -182289802 + L1MB4 LINE L1 5574 6180 0 311 218 0 0 chr2 70966884 70966939 -182289644 + MIR SINE MIR 92 146 -62 877 198 6 0 chr2 70968387 70968554 -182288029 + MER58B DNA MER1_type 10 177 -164 842 155 187 0 chr2 70968654 70968809 -182287774 + MER58B DNA MER1_type 158 341 0 545 42 14 0 chr2 70969276 70969348 -182287235 + (TAGA)n Simple_repeat Simple_repeat 1 73 0 254 375 48 12 chr2 70969620 70969788 -182286795 + L3 LINE CR1 1318 1491 -86 414 229 127 25 chr2 70969828 70969985 -182286598 + MER5A DNA MER1_type 13 185 -4 505 240 65 96 chr2 70971607 70971836 -182284747 - MER102a DNA MER1_type -2 328 107 2253 107 3 0 chr2 70973200 70973498 -182283085 + AluSx SINE Alu 1 299 -13 706 130 0 9 chr2 70974297 70974412 -182282171 - AluSp/q SINE Alu -14 299 186 1972 148 0 10 chr2 70974575 70974873 -182281710 + AluJo SINE Alu 1 295 -17 207 289 113 42 chr2 70974978 70975120 -182281463 + L2 LINE L2 3115 3266 -6 338 270 107 62 chr2 70976312 70976490 -182280093 + MIR3 SINE MIR 16 201 -7 394 272 92 42 chr2 70976944 70977299 -182279284 - LTR16A1 LTR ERVL 0 457 75 357 335 77 20 chr2 70978084 70978332 -182278251 + MLT1J2 LTR MaLR 65 326 -124 563 247 196 41 chr2 70978746 70978940 -182277643 + MER58A DNA MER1_type 1 224 0 284 196 147 49 chr2 70980121 70980223 -182276360 + MER5C DNA MER1_type 13 124 -200 189 0 0 0 chr2 70981728 70981749 -182274834 + (A)n Simple_repeat Simple_repeat 1 21 0 752 186 60 27 chr2 70981924 70982107 -182274476 + MER53 DNA DNA 1 189 0 207 209 164 30 chr2 70982153 70982220 -182274363 - MER5A DNA MER1_type -1 188 113 2074 127 32 176 chr2 70982555 70983089 -182273494 + LTR32 LTR ERVL 15 471 0 336 305 75 20 chr2 70983096 70983296 -182273287 - MIR SINE MIR -32 230 20 278 282 26 0 chr2 70983333 70983411 -182273172 + MIR SINE MIR 28 107 -101 366 270 135 0 chr2 70983912 70984038 -182272545 + MIR SINE MIR 120 262 0 241 346 103 0 chr2 70984056 70984163 -182272420 + L2 LINE L2 3141 3258 -14 285 169 0 0 chr2 70984171 70984230 -182272353 + (TGGA)n Simple_repeat Simple_repeat 3 61 0 716 192 17 0 chr2 70984519 70984639 -182271944 + FLAM_C SINE Alu 2 123 -20 353 121 0 30 chr2 70984642 70984708 -182271875 + (CATATA)n Simple_repeat Simple_repeat 3 66 0 1410 175 4 0 chr2 70986122 70986351 -182270232 + AluJo SINE Alu 1 230 -82 478 310 51 29 chr2 70987578 70987743 -182268840 - L1ME3A LINE L1 -289 5881 5704 2228 123 0 0 chr2 70987743 70988036 -182268547 - AluSx SINE Alu -18 294 2 478 310 51 29 chr2 70988036 70988183 -182268400 - L1ME3A LINE L1 -466 5704 5562 577 278 76 5 chr2 70988838 70989061 -182267522 + MIR SINE MIR 18 256 -6 346 295 129 16 chr2 70990129 70990322 -182266261 + MIR SINE MIR 34 248 -14 285 156 14 26 chr2 70992211 70992284 -182264299 + MER5A DNA MER1_type 33 109 -80 813 241 54 51 chr2 70992916 70993254 -182263329 + MLT1I LTR MaLR 89 409 0 1643 157 82 34 chr2 70994766 70995059 -182261524 + AluSx SINE Alu 1 307 -5 210 143 0 0 chr2 70996143 70996178 -182260405 + (GGA)n Simple_repeat Simple_repeat 2 36 0 276 30 0 0 chr2 70996691 70996724 -182259859 + (CAG)n Simple_repeat Simple_repeat 3 35 0 1979 160 0 3 chr2 70997065 70997371 -182259212 - AluJo SINE Alu -7 305 1 790 182 126 6 chr2 70997815 70997974 -182258609 - MER5B DNA MER1_type 0 178 1 511 234 158 13 chr2 70997988 70998146 -182258437 - MER5A DNA MER1_type -6 183 3 702 247 11 23 chr2 70998157 70998331 -182258252 - MER5A DNA MER1_type -1 188 17 1740 107 0 21 chr2 70998331 70998574 -182258009 - AluSq SINE Alu -14 299 62 269 154 0 0 chr2 70999998 71000037 -182256546 - AluJo SINE Alu -14 288 250 1182 153 16 5 chr2 71000084 71000273 -182256310 - AluJo SINE Alu -56 256 66 2026 87 36 55 chr2 71000432 71000741 -182255842 + AluY SINE Alu 1 303 -8 480 49 0 0 chr2 71001008 71001069 -182255514 + MER53 DNA DNA 128 188 -1 209 57 29 0 chr2 71001620 71001655 -182254928 + (CAAAA)n Simple_repeat Simple_repeat 3 38 0 457 285 137 23 chr2 71002229 71002741 -182253842 + L1MC4a LINE L1 4309 4878 -1268 860 263 81 87 chr2 71002741 71003410 -182253173 + L1MC4a LINE L1 5305 5973 -148 1657 168 0 63 chr2 71003575 71003890 -182252693 + AluJo SINE Alu 3 297 -15 205 176 29 88 chr2 71003990 71004012 -182252571 - MIR3 SINE MIR -24 184 162 1660 186 33 33 chr2 71004012 71004377 -182252206 - MLT1A1 LTR MaLR 0 365 1 205 176 29 88 chr2 71004377 71004422 -182252161 - MIR3 SINE MIR -46 162 121 701 201 19 0 chr2 71004734 71004893 -182251690 + MER5B DNA MER1_type 7 168 -10 182 390 38 9 chr2 71005052 71005157 -182251426 + L2 LINE L2 3155 3262 -10 810 211 49 164 chr2 71005454 71005967 -182250616 + LTR37B LTR ERV1 11 464 -4 254 379 19 12 chr2 71005998 71006159 -182250424 + L2 LINE L2 2909 3070 -202 197 189 0 0 chr2 71006446 71006483 -182250100 - L2 LINE L2 -8 3264 3228 323 213 58 85 chr2 71007402 71007544 -182249039 + MIR SINE MIR 28 165 -69 884 257 23 12 chr2 71007554 71007811 -182248772 + MIR SINE MIR 3 262 0 212 189 0 0 chr2 71007813 71007850 -182248733 + (TTA)n Simple_repeat Simple_repeat 2 38 0 335 298 15 15 chr2 71007881 71008012 -182248571 - MIR SINE MIR -74 188 58 858 229 139 11 chr2 71008931 71009211 -182247372 + MER5C DNA MER1_type 9 324 0 369 349 52 5 chr2 71009486 71009678 -182246905 - MIR SINE MIR -61 201 1 270 136 0 0 chr2 71012062 71012106 -182244477 + (CA)n Simple_repeat Simple_repeat 1 44 0 1262 236 172 10 chr2 71014429 71014831 -182241752 + MLT1C LTR MaLR 1 467 0 1234 162 29 0 chr2 71014988 71015192 -182241391 - MER63A DNA MER1_type 0 210 1 486 325 50 47 chr2 71015914 71016277 -182240306 + MLT1I LTR MaLR 4 367 -42 367 323 8 0 chr2 71016398 71016528 -182240055 - MIR3 SINE MIR -7 201 71 420 321 96 5 chr2 71016628 71016846 -182239737 + MIR SINE MIR 15 252 -10 2308 113 3 0 chr2 71017623 71017932 -182238651 + AluSq SINE Alu 1 310 -3 309 130 0 0 chr2 71018020 71018074 -182238509 + L1PA13 LINE L1 6108 6161 -2 1650 165 13 20 chr2 71018228 71018531 -182238052 + AluJo SINE Alu 12 312 0 656 294 164 19 chr2 71018968 71019243 -182237340 - MLT1H LTR MaLR -110 439 93 2205 162 18 30 chr2 71019243 71019644 -182236939 + MSTD LTR MaLR 1 396 0 656 294 164 19 chr2 71019644 71019745 -182236838 - MLT1H LTR MaLR -456 93 8 732 289 47 71 chr2 71019754 71020204 -182236379 - HAL1 LINE L1 -1620 887 449 4290 148 18 9 chr2 71020312 71020989 -182235594 + MER50 LTR ERV1 29 711 -23 2269 141 41 8 chr2 71020995 71021364 -182235219 - MER34C LTR ERV1 -204 381 1 1906 168 94 70 chr2 71021580 71021913 -182234670 + L1M4 LINE L1 5269 5619 -565 2347 129 70 15 chr2 71021913 71022316 -182234267 - MSTB LTR MaLR -1 425 1 1906 168 94 70 chr2 71022316 71022481 -182234102 + L1M4 LINE L1 5619 5779 -405 1930 202 6 0 chr2 71022481 71022818 -182233765 - MER2 DNA MER2_type -1 344 6 1112 171 55 5 chr2 71023828 71024027 -182232556 + MER3 DNA MER1_type 1 209 0 201 267 0 0 chr2 71024038 71024083 -182232500 + MIR SINE MIR 85 129 -79 2172 122 57 3 chr2 71025245 71025581 -182231002 + MER34B LTR ERV1 1 354 -211 791 187 0 0 chr2 71025582 71025716 -182230867 + FRAM SINE Alu 28 161 -15 1180 113 54 0 chr2 71025719 71025890 -182230693 + MER34B LTR ERV1 349 529 -36 794 228 94 56 chr2 71025890 71026422 -182230161 - LTR48 LTR ERV1 0 787 1 706 300 34 13 chr2 71027246 71027479 -182229104 - MIR SINE MIR 0 262 25 399 257 20 0 chr2 71027680 71027781 -182228802 - MIR3 SINE MIR -7 201 99 2203 115 0 19 chr2 71028035 71028349 -182228234 + AluSg SINE Alu 1 308 -2 1427 232 52 31 chr2 71029102 71029490 -182227093 + MSTD LTR MaLR 1 396 0 7532 215 47 33 chr2 71029492 71031085 -182225498 + MSTD-int LTR MaLR 2 1622 -113 670 242 0 0 chr2 71031085 71031209 -182225374 - FLAM_A SINE Alu -9 124 1 7532 215 47 33 chr2 71031209 71031325 -182225258 + MSTD-int LTR MaLR 1622 1735 0 298 272 0 12 chr2 71031325 71031406 -182225177 + MSTD LTR MaLR 1 80 -316 5414 71 13 0 chr2 71031407 71032115 -182224468 - L1PA7 LINE L1 -1481 4665 3949 6965 67 6 1 chr2 71032115 71033588 -182222995 + L1PA7 LINE L1 4674 6151 -3 21 0 0 0 chr2 71033588 71033609 -182222974 + AT_rich Low_complexity Low_complexity 1 21 0 1945 126 0 0 chr2 71033672 71033933 -182222650 + AluSx SINE Alu 32 292 -20 1280 220 84 23 chr2 71033933 71034242 -182222341 + MSTD LTR MaLR 69 396 0 238 293 61 27 chr2 71034794 71034941 -182221642 + MER103 DNA DNA 2 153 -13 286 303 28 35 chr2 71034991 71035133 -182221450 - MIR3 SINE MIR -29 179 39 2116 104 0 24 chr2 71036015 71036334 -182220249 + AluSx SINE Alu 2 313 0 1901 121 11 11 chr2 71036410 71036682 -182219901 + AluSq SINE Alu 38 309 -4 2296 90 13 3 chr2 71036682 71036981 -182219602 + AluY SINE Alu 1 302 -9 191 297 95 0 chr2 71037581 71037655 -182218928 + L2 LINE L2 3201 3281 -32 2064 171 152 8 chr2 71037656 71038153 -182218430 + MLT1F1 LTR MaLR 1 567 0 650 283 300 15 chr2 71038261 71038728 -182217855 + MLT1F1-int LTR MaLR 2 601 -770 6927 74 2 2 chr2 71039438 71041422 -182215161 + L1PA14 LINE L1 4170 6161 0 316 181 229 56 chr2 71041555 71041699 -182214884 + L1MC5 LINE L1 7757 7925 -36 239 277 18 36 chr2 71042304 71042416 -182214167 + GA-rich Low_complexity Low_complexity 4 113 0 249 33 0 0 chr2 71042793 71042823 -182213760 + (TA)n Simple_repeat Simple_repeat 2 31 0 180 0 0 0 chr2 71043562 71043582 -182213001 + (TC)n Simple_repeat Simple_repeat 1 20 0 405 0 0 0 chr2 71043588 71043633 -182212950 + (TG)n Simple_repeat Simple_repeat 2 46 0 209 245 0 0 chr2 71043633 71043677 -182212906 + CT-rich Low_complexity Low_complexity 2 45 0 581 302 81 0 chr2 71045020 71045192 -182211391 + MER117 DNA MER1_type 1 186 -11 666 321 42 0 chr2 71045326 71045538 -182211045 - MIR SINE MIR -2 260 40 576 256 118 37 chr2 71045867 71046164 -182210419 - HAL1 LINE L1 -8 2499 2179 268 255 39 39 chr2 71046254 71046356 -182210227 - HAL1b LINE L1 -501 847 746 1906 166 0 10 chr2 71046614 71046927 -182209656 - AluJo SINE Alu -2 310 1 2112 276 64 56 chr2 71046982 71048107 -182208476 - HAL1 LINE L1 -601 1906 773 25 65 0 0 chr2 71048595 71048641 -182207942 + AT_rich Low_complexity Low_complexity 1 46 0 261 311 44 38 chr2 71048976 71049159 -182207424 - L2 LINE L2 -429 2885 2702 1525 179 127 4 chr2 71049160 71049428 -182207155 - AluJb SINE Alu -1 301 1 393 295 30 66 chr2 71049500 71049666 -182206917 - MIR SINE MIR -54 208 49 2029 176 25 6 chr2 71049880 71050237 -182206346 - MER47A DNA MER2_type -1 365 2 1399 219 76 16 chr2 71050246 71050671 -182205912 + MLT1C LTR MaLR 6 467 0 414 0 0 0 chr2 71050753 71050799 -182205784 + (CA)n Simple_repeat Simple_repeat 1 46 0 275 246 0 0 chr2 71051031 71051100 -182205483 - MIR SINE MIR -41 221 153 186 205 0 0 chr2 71051084 71051123 -182205460 + L2 LINE L2 3265 3303 -10 * 291 287 21 43 chr2 71051771 71051865 -182204718 + MIR SINE MIR 16 107 -101 218 305 37 58 chr2 71051927 71052117 -182204466 + L2 LINE L2 2839 3024 -248 517 343 36 24 chr2 71053445 71053693 -182202890 + MIR SINE MIR 12 262 0 405 0 0 0 chr2 71053778 71053823 -182202760 + (CA)n Simple_repeat Simple_repeat 2 46 0 366 331 97 18 chr2 71053910 71054188 -182202395 - LTR16C LTR ERVL -14 477 178 189 417 19 32 chr2 71054615 71054771 -182201812 - L3 LINE CR1 -15 1562 1409 1313 283 112 12 chr2 71054876 71055303 -182201280 - HERV16 LTR ERVL -2329 2667 2198 2618 207 17 2 chr2 71055333 71055802 -182200781 - MER70B LTR ERVL -102 476 1 3745 272 93 64 chr2 71055802 71056538 -182200045 - HERV16 LTR ERVL -2794 2202 1489 326 44 44 0 chr2 71056538 71056583 -182200000 - MADE1 DNA Mariner 0 80 34 3745 272 93 64 chr2 71056583 71056650 -182199933 - HERV16 LTR ERVL -3507 1489 1425 884 171 0 0 chr2 71056650 71056779 -182199804 - FLAM_A SINE Alu -4 129 1 3745 272 93 64 chr2 71056779 71057608 -182198975 - HERV16 LTR ERVL -3571 1425 392 659 230 9 0 chr2 71057608 71057721 -182198862 - MER81 DNA DNA 0 114 1 3745 272 93 64 chr2 71057721 71058125 -182198458 - HERV16 LTR ERVL -4604 392 1 976 244 26 17 chr2 71058125 71058359 -182198224 - LTR16A LTR ERVL 0 450 215 1917 239 100 17 chr2 71058387 71058906 -182197677 + MER77 LTR ERV1 41 602 -3 2391 172 76 0 chr2 71059381 71059777 -182196806 - MSTB LTR MaLR 0 426 1 21 0 0 0 chr2 71060318 71060339 -182196244 + AT_rich Low_complexity Low_complexity 1 21 0 437 254 155 57 chr2 71061130 71061394 -182195189 - MER102b DNA MER1_type -9 332 43 2399 231 45 18 chr2 71061516 71062078 -182194505 - MLT1G LTR MaLR -13 577 1 654 159 65 14 chr2 71062134 71062272 -182194311 + MSTB1 LTR MaLR 288 432 0 412 234 106 35 chr2 71063067 71063208 -182193375 + L2 LINE L2 3155 3305 -8 260 209 36 27 chr2 71063248 71063358 -182193225 + (TA)n Simple_repeat Simple_repeat 1 111 0 329 218 21 133 chr2 71063509 71063697 -182192886 + MIR SINE MIR 92 258 -4 207 0 0 0 chr2 71064233 71064256 -182192327 + (A)n Simple_repeat Simple_repeat 1 23 0 462 250 162 25 chr2 71064834 71065038 -182191545 + HAL1 LINE L1 1411 1642 -865 437 271 45 0 chr2 71065252 71065385 -182191198 - MLT1J2 LTR MaLR -245 205 67 345 320 63 16 chr2 71065435 71065738 -182190845 - L1M4 LINE L1 -3699 2447 2131 455 267 228 43 chr2 71066251 71067134 -182189449 + L1MC4a LINE L1 4021 5074 -1072 1251 168 96 0 chr2 71067391 71067611 -182188972 + AluJb SINE Alu 40 280 -32 315 0 0 0 chr2 71067615 71067650 -182188933 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 634 329 117 12 chr2 71067657 71068161 -182188422 + L1MC4a LINE L1 5330 5886 -1922 327 276 55 35 chr2 71068674 71068819 -182187764 + MIR3 SINE MIR 38 185 -23 249 33 0 0 chr2 71069268 71069298 -182187285 + (CA)n Simple_repeat Simple_repeat 1 30 0 366 242 55 0 chr2 71069525 71069616 -182186967 + MIR SINE MIR 166 261 -1 2070 101 14 4 chr2 71069629 71069928 -182186655 - AluSx SINE Alu 0 302 1 1453 222 38 77 chr2 71070067 71070411 -182186172 - L1MD2 LINE L1 -2 6357 6038 619 238 16 0 chr2 71070411 71070537 -182186046 - FLAM_A SINE Alu -5 128 1 1453 222 38 77 chr2 71070537 71070697 -182185886 - L1MD2 LINE L1 -321 6038 5873 2048 100 3 63 chr2 71070778 71071128 -182185455 - L1MA2 LINE L1 -1 6303 5975 913 133 51 62 chr2 71072524 71072719 -182183864 + MER20 DNA MER1_type 27 219 0 206 371 42 21 chr2 71072780 71072923 -182183660 + MIR SINE MIR 103 248 -14 361 320 61 49 chr2 71073142 71073389 -182183194 + MLT1K LTR MaLR 174 423 -165 311 227 0 0 chr2 71073435 71073501 -182183082 + MLT1K LTR MaLR 521 586 -2 226 306 108 100 chr2 71074009 71074539 -182182044 + L2 LINE L2 150 674 -2640 264 262 60 0 chr2 71074539 71074623 -182181960 - MER91C DNA MER1_type -32 108 20 226 306 108 100 chr2 71074623 71075079 -182181504 + L2 LINE L2 674 1228 -2086 180 265 94 60 chr2 71075210 71075327 -182181256 + L2 LINE L2 2679 2799 -515 540 278 66 82 chr2 71075433 71075872 -182180711 + L2 LINE L2 2880 3311 -2 3165 249 47 42 chr2 71076535 71076907 -182179676 - HAL1 LINE L1 -43 2464 2095 2409 90 10 0 chr2 71076907 71077208 -182179375 + AluSc SINE Alu 1 304 -5 3165 249 47 42 chr2 71077208 71077911 -182178672 - HAL1 LINE L1 -412 2095 1384 971 311 57 53 chr2 71077914 71078686 -182177897 - L1MEc LINE L1 -5531 865 91 2426 88 7 0 chr2 71078702 71079009 -182177574 - AluSx SINE Alu -2 310 2 1031 252 60 3 chr2 71079100 71079453 -182177130 - HAL1 LINE L1 -1131 1376 1004 2040 106 0 0 chr2 71079469 71079734 -182176849 + AluSx SINE Alu 35 299 -13 300 315 95 36 chr2 71079884 71080053 -182176530 + MIR3 SINE MIR 10 191 -55 981 145 28 89 chr2 71080289 71080503 -182176080 - MER20 DNA MER1_type 0 219 19 214 274 0 16 chr2 71080637 71080699 -182175884 + MIR SINE MIR 171 231 -31 2194 101 0 3 chr2 71080720 71081007 -182175576 + AluSq SINE Alu 1 286 -27 744 237 25 22 chr2 71081624 71081807 -182174776 + MLT1H1 LTR MaLR 74 253 -302 6280 144 16 8 chr2 71081840 71083318 -182173265 + L1MA8 LINE L1 4807 6291 0 686 221 226 0 chr2 71083371 71083561 -182173022 + MLT1H1 LTR MaLR 361 593 -2 2443 141 5 19 chr2 71085095 71085465 -182171118 - MLT1A1 LTR MaLR 0 365 1 1439 186 144 39 chr2 71085696 71085998 -182170585 - MLT1E1 LTR MaLR 0 654 301 1389 164 38 159 chr2 71085998 71086419 -182170164 - MLT1A2 LTR MaLR -4 370 1 1439 186 144 39 chr2 71086419 71086504 -182170079 - MLT1E1 LTR MaLR -353 301 226 226 197 227 0 chr2 71086511 71086577 -182170006 - MLT1E1 LTR MaLR -573 81 1 21 57 0 0 chr2 71086998 71087033 -182169550 + AT_rich Low_complexity Low_complexity 1 35 0 731 251 171 12 chr2 71087757 71088084 -182168499 - L3 LINE CR1 -3 1574 1196 789 188 123 0 chr2 71088975 71089145 -182167438 + MIR SINE MIR 6 196 -66 538 291 40 15 chr2 71089387 71089586 -182166997 + LTR16A1 LTR ERVL 162 365 -92 2314 102 0 0 chr2 71089749 71090042 -182166541 - AluSx SINE Alu -19 293 1 2522 118 55 3 chr2 71090954 71091300 -182165283 + THE1B LTR MaLR 1 364 0 379 223 88 40 chr2 71092186 71092334 -182164249 + MER103 DNA DNA 8 162 -4 5627 191 53 19 chr2 71092406 71093703 -182162880 + Charlie1a DNA MER1_type 1 1350 -1411 1313 166 28 0 chr2 71093703 71093920 -182162663 - MER58A DNA MER1_type 0 224 2 5627 191 53 19 chr2 71093920 71094030 -182162553 + Charlie1a DNA MER1_type 1350 1455 0 2508 170 16 2 chr2 71095297 71095743 -182160840 + LTR32 LTR ERVL 20 471 0 1141 204 60 31 chr2 71096387 71096705 -182159878 - MLT1A2 LTR MaLR 0 374 48 1104 176 5 0 chr2 71097100 71097287 -182159296 - MER5A DNA MER1_type 0 189 2 24853 136 9 18 chr2 71097351 71098309 -182158274 + L1PA8A LINE L1 292 1256 -5190 189 74 0 0 chr2 71098309 71098336 -182158247 + (CAA)n Simple_repeat Simple_repeat 1 27 0 24853 136 9 18 chr2 71098336 71100343 -182156240 + L1PA8A LINE L1 1256 3278 -3168 1848 136 3 57 chr2 71100343 71100659 -182155924 + AluSc SINE Alu 5 303 -6 24853 136 9 18 chr2 71100659 71103832 -182152751 + L1PA8A LINE L1 3278 6442 -4 1315 259 42 15 chr2 71103832 71104233 -182152350 - LTR16C LTR ERVL -79 412 1 2132 108 0 0 chr2 71104710 71104987 -182151596 + AluSg SINE Alu 2 278 -32 252 0 0 0 chr2 71104987 71105015 -182151568 + (TAAAA)n Simple_repeat Simple_repeat 1 28 0 336 48 0 0 chr2 71105322 71105364 -182151219 + (CA)n Simple_repeat Simple_repeat 1 42 0 1271 81 5 32 chr2 71105782 71105967 -182150616 + L1PA10 LINE L1 5979 6158 -10 2419 90 0 0 chr2 71106731 71107042 -182149541 - AluY SINE Alu 0 311 1 400 258 117 16 chr2 71107166 71107294 -182149289 - MER5A DNA MER1_type 0 189 49 2281 113 0 19 chr2 71107377 71107696 -182148887 - AluSq SINE Alu 0 313 1 2883 143 43 20 chr2 71108058 71108596 -182147987 - MER21A LTR ERV1 -6 925 376 1077 136 100 44 chr2 71108601 71108836 -182147747 - MER21A LTR ERV1 -667 264 13 441 0 0 0 chr2 71108836 71108885 -182147698 + (TCTA)n Simple_repeat Simple_repeat 4 52 0 1077 136 100 44 chr2 71108885 71108899 -182147684 - MER21A LTR ERV1 -918 13 1 1236 147 0 5 chr2 71109014 71109198 -182147385 + AluJo SINE Alu 1 183 -129 304 303 0 11 chr2 71109266 71109355 -182147228 + L1MC4 LINE L1 6614 6701 -1341 * 335 229 0 73 chr2 71109290 71109386 -182147197 - L1MC4 LINE L1 -1339 6703 6615 315 169 70 0 chr2 71109354 71109425 -182147158 - L1MCa LINE L1 -4356 2070 1995 * 305 296 23 0 chr2 71109413 71109501 -182147082 - L1MC4 LINE L1 -1339 6703 6614 * 300 310 23 0 chr2 71109455 71109542 -182147041 + L1MC4 LINE L1 6614 6702 -1340 * 331 303 0 0 chr2 71109515 71109604 -182146979 - L1MC4 LINE L1 -1339 6703 6615 325 315 0 0 chr2 71109561 71109650 -182146933 + L1MC4 LINE L1 6614 6702 -1340 * 346 264 23 0 chr2 71109621 71109708 -182146875 - L1MC4 LINE L1 -1339 6703 6615 235 224 0 24 chr2 71109731 71109816 -182146767 - L1MC4 LINE L1 -1341 6701 6619 1000 200 0 16 chr2 71109833 71110018 -182146565 - AluJo SINE Alu -24 288 107 180 0 0 0 chr2 71110037 71110057 -182146526 + (CA)n Simple_repeat Simple_repeat 1 20 0 885 229 28 51 chr2 71110900 71111337 -182145246 + L1MC5 LINE L1 6876 7256 -733 360 205 31 39 chr2 71111412 71111539 -182145044 + L1MC5 LINE L1 7268 7393 -568 252 282 103 17 chr2 71111592 71111766 -182144817 + L1MC5 LINE L1 7610 7798 -163 16366 67 2 12 chr2 71111803 71114857 -182141726 + L1PA6 LINE L1 3101 6137 -17 2346 122 0 0 chr2 71115033 71115345 -182141238 + AluSq SINE Alu 1 312 -1 523 211 224 0 chr2 71115493 71115640 -182140943 + MER5A DNA MER1_type 10 189 0 633 201 86 11 chr2 71115759 71115933 -182140650 - MLT1B LTR MaLR 0 390 204 648 242 155 30 chr2 71115946 71116002 -182140581 - L1MEd LINE L1 -1894 4235 4187 2119 105 0 19 chr2 71116002 71116315 -182140268 - AluSg SINE Alu -3 307 1 648 242 155 30 chr2 71116315 71116593 -182139990 - L1MEd LINE L1 -1942 4187 3859 * 1212 256 103 31 chr2 71116572 71117379 -182139204 - L1MEd LINE L1 -2828 3301 2437 541 307 68 52 chr2 71117413 71117459 -182139124 - L1MEd LINE L1 -4001 2309 2265 1748 158 52 81 chr2 71117459 71117903 -182138680 + MSTB1 LTR MaLR 2 432 0 541 307 68 52 chr2 71117903 71118396 -182138187 - L1MEd LINE L1 -4045 2265 1761 6445 117 29 6 chr2 71118477 71119961 -182136622 - L1MA3 LINE L1 0 6305 4783 190 292 146 22 chr2 71120335 71120472 -182136111 - MIR SINE MIR -93 169 16 3951 146 16 3 chr2 71121795 71122541 -182134042 - L1MA3 LINE L1 -1351 4795 4040 630 288 73 38 chr2 71122583 71123439 -182133144 - L1MEd LINE L1 -4641 1669 732 1868 103 7 53 chr2 71123769 71124051 -182132532 + AluSx SINE Alu 21 289 -23 25 51 0 0 chr2 71124307 71124346 -182132237 + AT_rich Low_complexity Low_complexity 1 39 0 222 192 0 58 chr2 71124907 71124959 -182131624 - L2 LINE L2 0 3313 3265 596 229 53 6 chr2 71126021 71126191 -182130392 - MER5B DNA MER1_type 0 178 1 207 0 0 0 chr2 71127381 71127404 -182129179 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 187 333 72 18 chr2 71128959 71129070 -182127513 + L2 LINE L2 3185 3301 -12 2036 136 3 10 chr2 71129388 71129698 -182126885 + AluSx SINE Alu 1 308 -4 381 256 212 30 chr2 71129963 71130166 -182126417 + MIR SINE MIR 11 250 -12 4175 159 69 1 chr2 71130859 71131641 -182124942 + L1MC1 LINE L1 5491 6325 -8 23 0 0 0 chr2 71131642 71131665 -182124918 + AT_rich Low_complexity Low_complexity 1 23 0 2304 103 13 0 chr2 71131886 71132188 -182124395 + AluSq SINE Alu 1 306 -7 23 0 0 0 chr2 71133684 71133707 -182122876 + AT_rich Low_complexity Low_complexity 1 23 0 844 132 28 35 chr2 71133796 71133940 -182122643 - FLAM_C SINE Alu 0 143 1 1492 47 0 16 chr2 71133968 71134158 -182122425 - AluSp SINE Alu 0 313 127 2374 92 3 0 chr2 71134188 71134492 -182122091 + AluSx SINE Alu 1 305 -7 2128 166 86 0 chr2 71135062 71135483 -182121100 - MLT1C LTR MaLR -7 460 4 309 239 42 0 chr2 71135536 71135607 -182120976 + L2 LINE L2 3227 3300 -13 201 74 0 0 chr2 71135607 71135634 -182120949 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 194 283 33 17 chr2 71138149 71138209 -182118374 + L2 LINE L2 3211 3271 -1 23 0 0 0 chr2 71139776 71139799 -182116784 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 71139938 71139961 -182116622 + GC_rich Low_complexity Low_complexity 1 23 0 300 293 106 41 chr2 71140247 71140370 -182116213 - L2 LINE L2 -8 3264 3134 250 269 0 15 chr2 71140965 71141032 -182115551 + L2 LINE L2 2728 2793 -521 806 280 68 50 chr2 71141053 71141453 -182115130 + L2 LINE L2 2906 3312 -1 2394 66 0 0 chr2 71141560 71141847 -182114736 + AluY SINE Alu 23 309 -2 25 0 0 0 chr2 71142156 71142181 -182114402 + AT_rich Low_complexity Low_complexity 1 25 0 201 196 0 0 chr2 71143527 71143573 -182113010 + GA-rich Low_complexity Low_complexity 3 48 0 746 155 65 26 chr2 71144682 71144857 -182111726 - AluJb SINE Alu 0 301 121 583 297 57 6 chr2 71145461 71145636 -182110947 + MIR3 SINE MIR 16 199 -9 2285 97 3 3 chr2 71146025 71146323 -182110260 + AluSx SINE Alu 1 298 -14 256 306 55 27 chr2 71146543 71146762 -182109821 + L1ME LINE L1 3351 3575 -2571 307 225 330 0 chr2 71147091 71147282 -182109301 + L1ME LINE L1 5419 5672 -2136 2623 245 178 22 chr2 71147298 71148347 -182108236 + L2 LINE L2 1580 2792 -522 1084 189 14 22 chr2 71148347 71148569 -182108014 + AluJo SINE Alu 1 220 -92 597 264 136 42 chr2 71148639 71149067 -182107516 + L2 LINE L2 2778 3238 -75 230 347 0 0 chr2 71149107 71149244 -182107339 + L1ME LINE L1 5717 5806 -356 23 33 0 0 chr2 71149476 71149506 -182107077 + AT_rich Low_complexity Low_complexity 1 30 0 323 290 284 6 chr2 71150020 71150182 -182106401 - MIR SINE MIR -21 241 35 488 333 98 48 chr2 71150459 71151198 -182105385 + L2 LINE L2 2453 3222 -50 373 287 47 16 chr2 71151199 71151328 -182105255 - MER94 DNA DNA -1 133 1 1150 233 69 21 chr2 71151409 71151787 -182104796 - MLT2C1 LTR ERVL 0 397 2 1674 162 10 67 chr2 71151787 71152101 -182104482 + AluJo SINE Alu 1 296 -16 1025 246 42 73 chr2 71152216 71152886 -182103697 + L1MC5 LINE L1 7127 7775 -186 1791 114 80 8 chr2 71153244 71153508 -182103075 - AluSg SINE Alu -26 284 2 710 317 89 23 chr2 71153673 71154251 -182102332 + L1MC4a LINE L1 5285 5909 -1899 2031 98 14 28 chr2 71154256 71154564 -182102019 - AluSq SINE Alu 0 304 1 25 83 0 0 chr2 71154736 71154796 -182101787 + AT_rich Low_complexity Low_complexity 1 60 0 216 262 0 0 chr2 71155252 71155294 -182101289 - MIR SINE MIR -3 259 218 232 322 157 0 chr2 71155304 71155419 -182101164 - L2 LINE L2 -6 3266 3134 248 192 260 39 chr2 71155602 71155706 -182100877 - MIR SINE MIR -87 175 49 2471 263 62 46 chr2 71156075 71156096 -182100487 + L2 LINE L2 1776 1795 -1477 1752 176 126 8 chr2 71156096 71156476 -182100107 - MSTB LTR MaLR -1 425 1 2471 263 62 46 chr2 71156476 71157467 -182099116 + L2 LINE L2 1795 3099 -173 2089 104 17 3 chr2 71157467 71157754 -182098829 + AluSx SINE Alu 1 291 -21 183 162 0 0 chr2 71157767 71157804 -182098779 + (CAGGG)n Simple_repeat Simple_repeat 3 39 0 270 125 0 0 chr2 71157809 71157857 -182098726 + (TAAAA)n Simple_repeat Simple_repeat 3 50 0 247 213 16 0 chr2 71157858 71157919 -182098664 + L2 LINE L2 2703 2764 -550 285 210 160 10 chr2 71158692 71158792 -182097791 + MIR SINE MIR 148 262 0 1143 45 52 0 chr2 71159147 71159302 -182097281 + L1MA2 LINE L1 6135 6297 -7 26 0 0 0 chr2 71159302 71159328 -182097255 + AT_rich Low_complexity Low_complexity 1 26 0 526 218 170 6 chr2 71160491 71160656 -182095927 - MER5C DNA MER1_type -6 318 127 37838 66 8 23 chr2 71160890 71167138 -182089445 + L1PA5 LINE L1 1 6153 -1 532 276 79 56 chr2 71167165 71167520 -182089063 + L1ME4a LINE L1 5601 5963 -158 563 266 0 0 chr2 71168445 71168569 -182088014 - MER5C DNA MER1_type -200 124 1 558 269 19 19 chr2 71168797 71168953 -182087630 + MIR SINE MIR 107 262 0 1727 216 40 95 chr2 71169117 71169539 -182087044 + L1MC4 LINE L1 7067 7511 -531 1334 179 6 97 chr2 71169539 71169868 -182086715 - AluJo SINE Alu -13 299 1 1727 216 40 95 chr2 71169868 71170362 -182086221 + L1MC4 LINE L1 7511 7997 -45 240 128 85 0 chr2 71170363 71170410 -182086173 - MADE1 DNA Mariner -28 52 2 2073 96 68 71 chr2 71171288 71171653 -182084930 + THE1B LTR MaLR 1 364 0 23 0 0 0 chr2 71172039 71172062 -182084521 + AT_rich Low_complexity Low_complexity 1 23 0 1903 147 0 52 chr2 71172148 71172474 -182084109 + AluJb SINE Alu 3 311 -1 3308 107 34 8 chr2 71172677 71173171 -182083412 + MER84 LTR ERV1 1 507 0 1793 152 11 0 chr2 71173409 71173672 -182082911 - AluSx SINE Alu -34 278 13 503 262 105 63 chr2 71174450 71174736 -182081847 + MLT1H LTR MaLR 35 332 -217 1546 176 43 63 chr2 71174853 71175251 -182081332 - MLT1B LTR MaLR 0 390 1 22 0 0 0 chr2 71176419 71176441 -182080142 + AT_rich Low_complexity Low_complexity 1 22 0 1228 167 39 8 chr2 71176505 71176762 -182079821 + L1MD3 LINE L1 7730 7994 -1 225 171 24 0 chr2 71177655 71177696 -182078887 - Alu SINE Alu -257 42 1 2055 130 27 7 chr2 71179042 71179342 -182077241 + AluSx SINE Alu 3 308 -4 2057 154 48 15 chr2 71179826 71180221 -182076362 + MLT1C LTR MaLR 12 419 -48 3686 120 23 4 chr2 71180221 71180738 -182075845 + MER1A DNA MER1_type 1 527 0 258 241 138 0 chr2 71180872 71180897 -182075686 - L1MA10 LINE L1 0 6334 6310 1094 244 193 16 chr2 71180897 71181406 -182075177 - L1ME3 LINE L1 -16 6146 5548 789 186 96 23 chr2 71181424 71181601 -182074982 - MER58C DNA MER1_type 0 215 26 1164 243 16 34 chr2 71181613 71181934 -182074649 - MLT2F LTR ERVL 0 663 349 732 180 13 2 chr2 71181948 71182114 -182074469 - L1M2 LINE L1 -649 5513 5349 270 0 0 0 chr2 71182118 71182148 -182074435 + (TTTTC)n Simple_repeat Simple_repeat 2 31 0 1818 175 0 16 chr2 71182184 71182493 -182074090 + AluJb SINE Alu 1 304 -8 533 239 94 0 chr2 71182602 71182740 -182073843 + MIR SINE MIR 46 196 -66 188 138 0 0 chr2 71182801 71182830 -182073753 + L2 LINE L2 3266 3294 -19 192 77 0 0 chr2 71182948 71182974 -182073609 + (TTG)n Simple_repeat Simple_repeat 2 27 0 346 331 74 14 chr2 71182978 71183126 -182073457 - HAL1 LINE L1 -744 1763 1607 768 177 50 22 chr2 71183580 71183761 -182072822 - MER5A DNA MER1_type 0 189 4 1768 148 13 42 chr2 71184075 71184385 -182072198 + AluJb SINE Alu 1 301 -11 222 295 0 39 chr2 71184511 71184640 -182071943 + T-rich Low_complexity Low_complexity 5 128 0 307 288 63 0 chr2 71185581 71185692 -182070891 + MIR SINE MIR 116 233 -29 511 168 0 40 chr2 71188303 71188404 -182068179 + MER96B DNA MER1_type? 4 100 -317 527 217 84 18 chr2 71188433 71188599 -182067984 - MER96B DNA MER1_type? -239 178 2 294 255 31 81 chr2 71188601 71188660 -182067923 - L3b LINE CR1 -166 1417 1357 1001 122 99 70 chr2 71188660 71188873 -182067710 - MER20 DNA MER1_type 0 219 1 294 255 31 81 chr2 71188873 71188974 -182067609 - L3b LINE CR1 -226 1357 1265 638 267 122 76 chr2 71189798 71190259 -182066324 - LTR67 LTR ERVL 0 557 76 584 280 66 28 chr2 71190335 71190546 -182066037 + MIR SINE MIR 28 246 -16 243 0 0 0 chr2 71190558 71190585 -182065998 + (TG)n Simple_repeat Simple_repeat 2 28 0 251 308 0 0 chr2 71193208 71193286 -182063297 - Charlie8 DNA MER1_type 0 2417 2340 1862 130 0 7 chr2 71193373 71193642 -182062941 + AluSx SINE Alu 45 311 -1 204 184 0 41 chr2 71193845 71193894 -182062689 + (CATATA)n Simple_repeat Simple_repeat 3 49 0 267 79 0 0 chr2 71194246 71194284 -182062299 + (TC)n Simple_repeat Simple_repeat 2 39 0 207 0 0 0 chr2 71194284 71194307 -182062276 + (CA)n Simple_repeat Simple_repeat 1 23 0 1844 138 0 56 chr2 71194417 71194721 -182061862 + AluJo SINE Alu 1 287 -25 2177 123 10 0 chr2 71194806 71195107 -182061476 - AluSx SINE Alu -8 304 1 246 198 86 0 chr2 71195877 71195958 -182060625 + LTR16A1 LTR ERVL 1 88 -369 616 237 92 78 chr2 71195991 71196082 -182060501 + LTR16A1 LTR ERVL 159 247 -210 977 209 55 15 chr2 71196082 71196283 -182060300 - MER3 DNA MER1_type 0 209 1 616 237 92 78 chr2 71196283 71196486 -182060097 + LTR16A1 LTR ERVL 247 457 0 846 134 0 0 chr2 71197149 71197268 -182059315 - AluSq/x SINE Alu -194 119 1 2046 180 176 25 chr2 71197297 71197892 -182058691 - L1ME2 LINE L1 -10 6154 5470 744 231 178 24 chr2 71197934 71198310 -182058273 - L1ME2 LINE L1 -857 5289 4856 200 229 21 0 chr2 71198379 71198427 -182058156 + (CATATA)n Simple_repeat Simple_repeat 5 53 0 291 211 14 14 chr2 71198931 71199002 -182057581 + MLT1K LTR MaLR 518 588 0 1014 235 44 12 chr2 71199352 71199603 -182056980 - MIR SINE MIR 0 262 4 238 291 13 13 chr2 71200032 71200111 -182056472 + MLT1K LTR MaLR 18 96 -492 1605 216 59 8 chr2 71200367 71200903 -182055680 + MLT2F LTR ERVL 6 608 -55 2108 81 3 58 chr2 71201819 71202181 -182054402 + AluSx SINE Alu 1 312 0 2233 120 7 0 chr2 71202318 71202626 -182053957 + AluSx SINE Alu 1 310 -2 337 286 60 23 chr2 71202835 71202968 -182053615 + MIR SINE MIR 3 140 -122 1070 177 63 8 chr2 71203008 71203245 -182053338 + MSTB2 LTR MaLR 1 250 -207 1141 162 0 15 chr2 71203401 71203598 -182052985 + MSTB2 LTR MaLR 264 457 0 437 208 71 32 chr2 71203636 71203790 -182052793 - MLT1J LTR MaLR -54 457 298 373 246 100 8 chr2 71203788 71203918 -182052665 - MLT1J LTR MaLR -365 146 5 * 2146 99 7 0 chr2 71204158 71204442 -182052141 + AluSx SINE Alu 17 302 -10 202 229 188 31 chr2 71204444 71204540 -182052043 + MIR SINE MIR 152 262 0 2244 117 3 3 chr2 71204638 71204947 -182051636 - AluSx SINE Alu -2 310 2 2371 74 0 0 chr2 71205913 71206221 -182050362 + AluSp SINE Alu 1 308 0 480 304 119 27 chr2 71207562 71207822 -182048761 + MLT1J LTR MaLR 23 306 -205 292 139 0 0 chr2 71207830 71207873 -182048710 + MLT1J LTR MaLR 461 503 -8 1545 156 92 18 chr2 71207981 71208264 -182048319 - AluJb SINE Alu -8 304 1 2070 118 3 10 chr2 71208291 71208588 -182047995 + AluSx SINE Alu 1 295 -17 314 261 181 22 chr2 71210845 71210983 -182045600 + MER117 DNA MER1_type 4 163 -34 328 200 0 27 chr2 71211025 71211100 -182045483 + HsTC2 DNA Tc2 3 75 -1823 240 218 55 0 chr2 71211107 71211162 -182045421 + MLT1G1 LTR MaLR 6 63 -532 2373 102 0 3 chr2 71211162 71211475 -182045108 - AluSx SINE Alu 0 312 1 866 171 0 51 chr2 71211553 71211711 -182044872 + FRAM SINE Alu 1 147 -29 1385 262 103 26 chr2 71211736 71212202 -182044381 + MLT1G1 LTR MaLR 94 595 0 332 146 36 0 chr2 71212202 71212254 -182044329 + HsTC2 DNA Tc2 90 143 -1755 1274 204 91 74 chr2 71212262 71212499 -182044084 + HsTC2 DNA Tc2 1287 1519 -379 2085 108 21 0 chr2 71212499 71212786 -182043797 - L1PB1 LINE L1 0 6151 5859 1274 204 91 74 chr2 71212786 71212979 -182043604 + HsTC2 DNA Tc2 1519 1900 2 2214 93 29 29 chr2 71213154 71213466 -182043117 + AluSx SINE Alu 1 312 0 2356 87 0 3 chr2 71214300 71214599 -182041984 - AluSg SINE Alu -12 298 1 2378 76 7 10 chr2 71215084 71215387 -182041196 - AluY SINE Alu -9 302 1 2038 122 4 0 chr2 71216594 71216873 -182039710 + AluSx SINE Alu 1 280 -32 207 0 0 0 chr2 71217232 71217255 -182039328 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 345 188 0 0 chr2 71218323 71218387 -182038196 - L1MC1 LINE L1 -5 6328 6265 222 91 0 0 chr2 71218660 71218693 -182037890 + (GA)n Simple_repeat Simple_repeat 1 33 0 1883 163 3 13 chr2 71219056 71219363 -182037220 + AluJo SINE Alu 1 304 -8 2372 86 0 0 chr2 71220710 71221000 -182035583 + AluSg SINE Alu 1 290 -20 2316 78 0 3 chr2 71221016 71221326 -182035257 + AluY SINE Alu 1 309 0 2372 146 33 13 chr2 71222186 71222584 -182033999 + MSTB LTR MaLR 1 406 -20 1830 59 0 75 chr2 71222697 71222950 -182033633 + AluY SINE Alu 71 304 -7 226 345 120 30 chr2 71223504 71223872 -182032711 + L2 LINE L2 2260 2660 -654 1320 126 70 5 chr2 71224028 71224242 -182032341 - MER2 DNA MER2_type -2 343 116 933 63 47 0 chr2 71224233 71224360 -182032223 - MSTA LTR MaLR -295 133 1 * 734 273 54 5 chr2 71224617 71224822 -182031761 - MIR SINE MIR -38 224 10 2169 119 13 7 chr2 71225507 71225817 -182030766 - AluSx SINE Alu 0 312 1 1646 136 94 0 chr2 71226151 71226416 -182030167 - AluJo SINE Alu -18 294 5 1357 164 26 0 chr2 71226505 71226736 -182029847 - AluSx SINE Alu -75 237 1 29 28 0 0 chr2 71226737 71226773 -182029810 + AT_rich Low_complexity Low_complexity 1 36 0 231 266 177 32 chr2 71226866 71226990 -182029593 + L1ME LINE L1 5755 5896 -225 258 226 36 71 chr2 71228267 71228351 -182028232 + MER5A DNA MER1_type 55 135 -54 679 132 0 35 chr2 71228394 71228508 -182028075 + AluJb SINE Alu 203 312 0 404 274 0 0 chr2 71228593 71228695 -182027888 - Charlie7 DNA MER1_type -434 2178 2077 3337 170 94 25 chr2 71229086 71229809 -182026774 + L1MB8 LINE L1 5405 6177 -1 1207 162 99 43 chr2 71230320 71230622 -182025961 - MER33 DNA MER1_type -5 319 1 2180 110 0 53 chr2 71230663 71230981 -182025602 + AluSq SINE Alu 2 302 -11 2188 102 0 0 chr2 71231428 71231753 -182024830 + AluSx SINE Alu 1 325 0 226 292 14 0 chr2 71231765 71231837 -182024746 + L1MC/D LINE L1 5679 5751 -2057 293 156 0 91 chr2 71232047 71232124 -182024459 + MLT2D LTR ERVL 345 414 0 883 158 71 167 chr2 71232201 71232512 -182024071 - MLT1B LTR MaLR -152 238 1 704 316 30 4 chr2 71233497 71233728 -182022855 - MIR SINE MIR -25 237 1 1864 141 143 79 chr2 71233781 71234186 -182022397 - MSTB1 LTR MaLR -1 431 1 1344 250 86 16 chr2 71234399 71234899 -182021684 - L1ME3A LINE L1 -219 5951 5417 3172 138 11 4 chr2 71234996 71235454 -182021129 + LOR1b LTR ERV1 1 461 0 298 280 103 44 chr2 71235459 71235949 -182020634 - L1M4c LINE L1 -794 1949 1279 1724 173 11 18 chr2 71236083 71236367 -182020216 + AluJo SINE Alu 1 282 -30 284 48 24 0 chr2 71236390 71236432 -182020151 + (TA)n Simple_repeat Simple_repeat 2 44 0 1686 193 87 61 chr2 71236707 71236957 -182019626 - MLT1D LTR MaLR 0 505 263 387 0 0 0 chr2 71236957 71237000 -182019583 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 842 147 0 0 chr2 71237009 71237125 -182019458 - FLAM_C SINE Alu -17 116 1 1686 193 87 61 chr2 71237125 71237297 -182019286 - MLT1D LTR MaLR -249 256 56 2660 144 17 12 chr2 71237297 71237706 -182018877 + LTR57 LTR ERVL 1 411 0 1686 193 87 61 chr2 71237706 71237764 -182018819 - MLT1D LTR MaLR -449 56 1 725 297 80 58 chr2 71237771 71238269 -182018314 + MLT1J LTR MaLR 1 509 -2 772 240 104 25 chr2 71239052 71239369 -182017214 - L1MC4a LINE L1 -1905 5903 5562 501 314 126 57 chr2 71239389 71239867 -182016716 + MLT1J LTR MaLR 1 511 0 183 129 0 0 chr2 71240133 71240164 -182016419 + (CA)n Simple_repeat Simple_repeat 2 32 0 349 100 0 0 chr2 71240805 71240855 -182015728 + AluJ/FLAM SINE Alu 29 78 -224 2134 118 0 20 chr2 71240866 71241192 -182015391 + AluSx SINE Alu 1 320 0 227 267 216 9 chr2 71241194 71241310 -182015273 + MIR SINE MIR 117 256 -6 393 39 0 0 chr2 71242307 71242358 -182014225 + (TA)n Simple_repeat Simple_repeat 1 51 0 881 225 38 8 chr2 71242387 71242627 -182013956 - AluSg SINE Alu -35 275 29 1573 135 4 25 chr2 71242892 71243166 -182013417 - AluSg SINE Alu -42 268 1 1760 139 21 7 chr2 71243341 71243629 -182012954 + AluJo SINE Alu 2 293 -19 1958 126 25 0 chr2 71243632 71243756 -182012827 + AluSx SINE Alu 1 120 -192 351 0 0 0 chr2 71243756 71243795 -182012788 + (CA)n Simple_repeat Simple_repeat 2 40 0 1958 126 25 0 chr2 71243795 71243956 -182012627 + AluSx SINE Alu 120 293 -19 203 288 82 0 chr2 71244136 71244209 -182012374 - MIR SINE MIR -86 122 44 862 284 68 17 chr2 71244318 71244610 -182011973 + MLT1K LTR MaLR 146 452 -136 2250 112 0 0 chr2 71245264 71245560 -182011023 + AluSx SINE Alu 1 296 -16 23 0 0 0 chr2 71245814 71245837 -182010746 + AT_rich Low_complexity Low_complexity 1 23 0 260 296 61 35 chr2 71247588 71247703 -182008880 - L2 LINE L2 -4 3268 3151 21 0 0 0 chr2 71248358 71248379 -182008204 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 71249653 71249681 -182006902 + AT_rich Low_complexity Low_complexity 1 28 0 2302 112 0 0 chr2 71249735 71250047 -182006536 + AluSx SINE Alu 1 312 0 805 291 120 14 chr2 71250455 71250869 -182005714 + L2 LINE L2 2786 3241 -72 250 286 63 23 chr2 71251063 71251240 -182005343 - MIR SINE MIR -3 259 77 721 280 59 5 chr2 71252310 71252496 -182004087 - MER91A DNA MER1_type 0 196 1 204 40 0 0 chr2 71252631 71252656 -182003927 + (A)n Simple_repeat Simple_repeat 1 25 0 417 210 84 201 chr2 71252751 71252965 -182003618 + MER5B DNA MER1_type 1 189 0 2255 88 3 10 chr2 71253031 71253337 -182003246 - AluSc SINE Alu -5 304 1 2563 56 0 0 chr2 71253526 71253830 -182002753 - AluY SINE Alu -6 305 2 243 202 169 0 chr2 71253844 71253933 -182002650 + L1ME4a LINE L1 6002 6105 -16 1794 126 36 36 chr2 71254055 71254357 -182002226 - AluJb SINE Alu -10 302 1 417 141 28 0 chr2 71254384 71254455 -182002128 + AluJ/FRAM SINE Alu 226 298 -14 2348 112 0 6 chr2 71254495 71254809 -182001774 + AluSx SINE Alu 1 312 0 606 205 45 0 chr2 71254844 71255000 -182001583 + FRAM SINE Alu 10 172 -4 1634 132 58 74 chr2 71255100 71255411 -182001172 + AluJb SINE Alu 1 306 -6 517 176 0 0 chr2 71257585 71257676 -181998907 - Tigger3(Golem) DNA MER2_type -19 3010 2920 419 215 0 0 chr2 71257808 71257887 -181998696 - Tigger3(Golem) DNA MER2_type -2950 79 1 225 0 0 0 chr2 71257949 71257974 -181998609 + (TG)n Simple_repeat Simple_repeat 2 26 0 299 140 20 0 chr2 71257989 71258039 -181998544 - AluS SINE Alu -29 273 223 1141 114 19 0 chr2 71258042 71258200 -181998383 - AluSq SINE Alu -152 161 1 2362 65 0 7 chr2 71258659 71258949 -181997634 - AluY SINE Alu -8 303 16 395 276 102 24 chr2 71259408 71259535 -181997048 - MIR3 SINE MIR -27 181 45 198 351 53 46 chr2 71259690 71259841 -181996742 + MIR SINE MIR 108 259 -3 238 322 50 16 chr2 71259907 71260028 -181996555 - L2 LINE L2 -1042 2272 2148 25 0 0 0 chr2 71260541 71260566 -181996017 + GC_rich Low_complexity Low_complexity 1 25 0 1976 152 0 13 chr2 71260768 71261070 -181995513 + AluSx SINE Alu 1 298 -14 1633 180 57 0 chr2 71261701 71262018 -181994565 - MER47A DNA MER2_type -31 335 1 2249 88 3 0 chr2 71262165 71262448 -181994135 + AluSx SINE Alu 1 284 -28 405 54 0 0 chr2 71262448 71262504 -181994079 + (CATA)n Simple_repeat Simple_repeat 2 57 0 1784 166 20 3 chr2 71263123 71263419 -181993164 + AluJb SINE Alu 1 301 -11 1678 178 17 14 chr2 71263432 71263725 -181992858 + AluJo SINE Alu 3 296 -16 418 230 0 0 chr2 71263748 71263835 -181992748 - Tigger5 DNA MER2_type 0 2323 2237 234 269 26 39 chr2 71263882 71263960 -181992623 - Tigger5 DNA MER2_type -2246 77 1 2471 52 10 3 chr2 71263997 71264306 -181992277 + AluYa5 SINE Alu 1 311 0 1272 123 6 0 chr2 71264306 71264477 -181992106 + AluSg/x SINE Alu 131 302 -10 695 168 46 0 chr2 71264478 71264609 -181991974 + AluSq/x SINE Alu 1 137 -176 1261 209 69 11 chr2 71264736 71265099 -181991484 - L1ME1 LINE L1 -5 6161 5778 10682 122 42 5 chr2 71265100 71266887 -181989696 - Tigger2 DNA MER2_type -2 2716 863 3216 180 38 34 chr2 71266887 71267604 -181988979 - MER49 LTR ERV1 0 923 204 4139 153 40 49 chr2 71267622 71267826 -181988757 - Tigger2 DNA MER2_type -1835 883 679 2249 115 0 3 chr2 71267826 71268138 -181988445 - AluY SINE Alu 0 311 1 4139 153 40 49 chr2 71268138 71268824 -181987759 - Tigger2 DNA MER2_type -2039 679 1 396 136 31 11 chr2 71268824 71268925 -181987658 - L1ME1 LINE L1 -379 5783 5677 285 271 76 42 chr2 71269207 71269325 -181987258 + L2 LINE L2 1716 1837 -1477 592 253 129 62 chr2 71269327 71269375 -181987208 - HAL1 LINE L1 -4 2503 2460 2511 59 0 3 chr2 71269375 71269679 -181986904 + AluY SINE Alu 1 303 -8 592 253 129 62 chr2 71269679 71270275 -181986308 - HAL1 LINE L1 -47 2460 1816 422 257 154 6 chr2 71270310 71270485 -181986098 - HAL1 LINE L1 -2262 245 45 374 243 221 17 chr2 71270521 71270702 -181985881 - L2 LINE L2 -337 2977 2760 1773 247 166 25 chr2 71270704 71271417 -181985166 - L2 LINE L2 -2260 1054 242 278 237 348 10 chr2 71271582 71271730 -181984853 + MIR SINE MIR 50 243 -19 577 79 124 0 chr2 71271910 71271999 -181984584 - L1MB7 LINE L1 -16 6168 6069 233 167 0 0 chr2 71272098 71272152 -181984431 - FAM SINE Alu 0 179 126 909 200 0 12 chr2 71272163 71272328 -181984255 - AluJo SINE Alu -149 163 1 2342 102 0 0 chr2 71272587 71272891 -181983692 - AluSg SINE Alu -6 304 1 189 0 0 0 chr2 71273301 71273322 -181983261 + (T)n Simple_repeat Simple_repeat 1 21 0 1199 180 138 32 chr2 71273380 71273691 -181982892 - MER2 DNA MER2_type 0 344 1 27 92 0 0 chr2 71274138 71274214 -181982369 + AT_rich Low_complexity Low_complexity 1 76 0 2049 125 0 10 chr2 71274277 71274572 -181982011 - AluJb SINE Alu -20 292 1 406 148 337 0 chr2 71274782 71274883 -181981700 - Tigger5 DNA MER2_type 0 2323 2189 219 139 0 0 chr2 71275065 71275101 -181981482 + (TA)n Simple_repeat Simple_repeat 2 37 0 2896 241 99 42 chr2 71275120 71275559 -181981024 - L1M4 LINE L1 -1328 4818 4406 2159 112 3 0 chr2 71275559 71275844 -181980739 - AluY SINE Alu -23 288 3 2896 241 99 42 chr2 71275844 71276875 -181979708 - L1M4 LINE L1 -1740 4406 3264 207 280 196 42 chr2 71277082 71277225 -181979358 - MIR3 SINE MIR -4 204 40 788 289 158 13 chr2 71278070 71278520 -181978063 - HAL1 LINE L1 -592 1915 1401 2210 122 0 0 chr2 71278973 71279308 -181977275 - AluSx SINE Alu 0 312 1 1563 50 0 0 chr2 71279376 71279556 -181977027 - AluY SINE Alu -2 309 130 2231 105 3 0 chr2 71279903 71280198 -181976385 + AluSq SINE Alu 1 296 -17 200 182 0 18 chr2 71280894 71280949 -181975634 + (TA)n Simple_repeat Simple_repeat 2 55 0 994 298 4 4 chr2 71281042 71281304 -181975279 + MIR SINE MIR 1 262 0 269 189 0 19 chr2 71281419 71281472 -181975111 - L2 LINE L2 -4 3268 3217 541 175 158 46 chr2 71281646 71281826 -181974757 - L1MC5 LINE L1 -36 7925 7700 2108 102 34 3 chr2 71281826 71282119 -181974464 - AluSp SINE Alu -11 302 1 541 175 158 46 chr2 71282119 71282223 -181974360 - L1MC5 LINE L1 -261 7700 7609 2323 58 10 0 chr2 71282407 71282699 -181973884 - AluSp SINE Alu -17 296 2 236 330 34 23 chr2 71283177 71283265 -181973318 + L2 LINE L2 3000 3088 -184 2124 101 11 3 chr2 71284457 71284743 -181971840 + AluSq SINE Alu 2 289 -24 743 180 105 23 chr2 71284908 71285080 -181971503 - MER58A DNA MER1_type -1 223 38 37 32 0 16 chr2 71285210 71285235 -181971348 + AT_rich Low_complexity Low_complexity 1 25 -36 1774 153 62 0 chr2 71285235 71285510 -181971073 + AluSx SINE Alu 1 292 -20 37 32 0 16 chr2 71285510 71285546 -181971037 + AT_rich Low_complexity Low_complexity 25 61 0 2287 35 11 3 chr2 71285659 71285945 -181970638 + AluYa5 SINE Alu 1 288 -23 2125 88 4 0 chr2 71287080 71287353 -181969230 + AluY SINE Alu 38 311 0 1429 206 4 18 chr2 71287436 71287708 -181968875 + AluJb SINE Alu 1 268 -44 189 361 59 35 chr2 71287818 71287987 -181968596 - L2 LINE L2 -294 3019 2847 845 211 0 0 chr2 71288733 71288894 -181967689 + MER46A DNA MER2_type 1 161 -75 7754 132 31 17 chr2 71288894 71289089 -181967494 - Tigger1 DNA MER2_type 0 2418 2227 2541 53 0 3 chr2 71289089 71289390 -181967193 + AluY SINE Alu 1 300 -11 7754 132 31 17 chr2 71289390 71290045 -181966538 - Tigger1 DNA MER2_type -191 2227 1541 2020 150 0 0 chr2 71290045 71290345 -181966238 - AluSx SINE Alu -12 300 1 7754 132 31 17 chr2 71290345 71290815 -181965768 - Tigger1 DNA MER2_type -877 1541 1079 5130 135 51 3 chr2 71290825 71291711 -181964872 - Tigger1 DNA MER2_type -1490 928 1 5677 108 19 11 chr2 71291711 71293263 -181963320 + L1PA15 LINE L1 4557 6162 -3 395 163 0 25 chr2 71293277 71293357 -181963226 + MER46A DNA MER2_type 159 236 0 35 0 0 0 chr2 71294419 71294454 -181962129 + AT_rich Low_complexity Low_complexity 1 35 0 287 308 115 43 chr2 71294484 71294805 -181961778 + MLT1J2 LTR MaLR 40 413 -37 261 0 0 0 chr2 71294976 71295005 -181961578 + (CA)n Simple_repeat Simple_repeat 2 30 0 27 29 0 0 chr2 71295218 71295252 -181961331 + AT_rich Low_complexity Low_complexity 1 34 0 184 229 71 29 chr2 71297021 71297091 -181959492 + L2 LINE L2 2715 2787 -527 1057 276 97 37 chr2 71298060 71298659 -181957924 + L1ME1 LINE L1 180 814 -5582 1013 172 17 128 chr2 71298668 71298964 -181957619 + L1MB5 LINE L1 5837 6099 -75 1050 206 0 20 chr2 71298964 71299014 -181957569 + AluJb SINE Alu 85 134 -178 2121 104 7 10 chr2 71299014 71299311 -181957272 + AluSx SINE Alu 1 296 -16 1050 206 0 20 chr2 71299311 71299459 -181957124 + AluJb SINE Alu 134 279 -33 302 86 103 17 chr2 71299475 71299533 -181957050 + L1MB5 LINE L1 6104 6166 -8 1641 250 133 28 chr2 71299555 71300299 -181956284 + L1ME1 LINE L1 1296 2145 -4251 2009 198 104 19 chr2 71300299 71300778 -181955805 + MLT2B1 LTR ERVL 1 520 0 1641 250 133 28 chr2 71300778 71300901 -181955682 + L1ME1 LINE L1 2145 2254 -4142 3374 226 111 27 chr2 71300955 71301078 -181955505 + L1ME1 LINE L1 3643 3754 -2461 1998 140 7 7 chr2 71301078 71301386 -181955197 + AluSx SINE Alu 1 308 -4 3374 226 111 27 chr2 71301386 71302343 -181954240 + L1ME1 LINE L1 3754 4848 -1367 2250 99 3 10 chr2 71302343 71302645 -181953938 + AluSx SINE Alu 1 300 -12 3374 226 111 27 chr2 71302645 71302834 -181953749 + L1ME1 LINE L1 4848 5020 -1195 2211 191 91 123 chr2 71302817 71303043 -181953540 + L1ME1 LINE L1 5378 5610 -625 * 2005 224 76 50 chr2 71303043 71303649 -181952934 + MLT1E3 LTR MaLR 1 622 -2 2211 191 91 123 chr2 71303649 71304303 -181952280 + L1ME1 LINE L1 5610 6230 -5 2862 250 152 39 chr2 71305766 71306998 -181949585 - L1MDa LINE L1 -1825 4715 3050 1266 200 51 18 chr2 71306998 71307273 -181949310 - AluJo SINE Alu -24 288 5 2862 250 152 39 chr2 71307273 71307828 -181948755 - L1MDa LINE L1 -3490 3050 2559 438 222 0 0 chr2 71307829 71307930 -181948653 + (TATG)n Simple_repeat Simple_repeat 3 106 -4 402 21 0 0 chr2 71307930 71307977 -181948606 + (CA)n Simple_repeat Simple_repeat 2 48 0 438 222 0 0 chr2 71307977 71307983 -181948600 + (TATG)n Simple_repeat Simple_repeat 105 110 0 1496 169 55 4 chr2 71307983 71308255 -181948328 - AluJb SINE Alu -26 286 1 3604 175 109 14 chr2 71308255 71309352 -181947231 - L1MDa LINE L1 -4067 2473 1223 2037 231 78 18 chr2 71309352 71309915 -181946668 - Charlie1a DNA MER1_type -856 599 3 935 98 8 0 chr2 71309940 71310073 -181946510 + AluSx SINE Alu 1 134 -178 329 253 11 22 chr2 71310075 71310166 -181946417 + L1MC4 LINE L1 6614 6703 -1339 * 350 233 22 22 chr2 71310099 71310189 -181946394 - L1MC4 LINE L1 -1339 6703 6614 360 0 0 0 chr2 71310189 71310229 -181946354 + (TG)n Simple_repeat Simple_repeat 2 41 0 1118 134 0 6 chr2 71310252 71310416 -181946167 + AluSx SINE Alu 132 294 -18 2052 136 0 0 chr2 71310556 71310867 -181945716 - AluSx SINE Alu 0 313 3 219 255 0 0 chr2 71311180 71311231 -181945352 + L2 LINE L2 3189 3239 -74 391 279 174 12 chr2 71311928 71312024 -181944559 - MIR SINE MIR -30 232 153 2383 74 3 0 chr2 71312024 71312320 -181944263 + AluY SINE Alu 1 297 -14 391 279 174 12 chr2 71312320 71312384 -181944199 - MIR SINE MIR -109 153 46 203 309 36 64 chr2 71312846 71312956 -181943627 - L2 LINE L2 -2493 821 715 4181 182 55 13 chr2 71313159 71314202 -181942381 - L1MB8 LINE L1 -2 6176 5088 906 174 25 0 chr2 71314221 71314382 -181942201 + MER58B DNA MER1_type 177 341 0 591 206 88 0 chr2 71314963 71315099 -181941484 + MLT1L LTR MaLR 458 605 -10 186 319 99 44 chr2 71315669 71315760 -181940823 + L2 LINE L2 3175 3270 -2 221 373 133 22 chr2 71316121 71316443 -181940140 - L2 LINE L2 -23 3249 2892 184 272 86 49 chr2 71316660 71316741 -181939842 - L2 LINE L2 -689 2625 2542 236 336 25 33 chr2 71317660 71317782 -181938801 - L2 LINE L2 -3 3310 3190 1305 108 183 0 chr2 71317869 71318109 -181938474 + Tigger5 DNA MER2_type 2040 2323 0 830 204 112 35 chr2 71318135 71318395 -181938188 + MER57A LTR ERV1 124 403 0 218 264 14 28 chr2 71318402 71318474 -181938109 - L2 LINE L2 -78 3235 3165 247 360 57 34 chr2 71318612 71318787 -181937796 - L2 LINE L2 -366 2948 2770 1024 167 5 59 chr2 71319040 71319262 -181937321 + MER2 DNA MER2_type 1 210 -135 399 300 0 67 chr2 71319361 71319511 -181937072 - MIR SINE MIR -108 154 15 2082 128 10 0 chr2 71319529 71319825 -181936758 + AluSg SINE Alu 1 299 -11 686 248 50 10 chr2 71319879 71320077 -181936506 + MER3 DNA MER1_type 2 207 -2 2125 134 3 0 chr2 71320110 71320417 -181936166 + AluSg SINE Alu 3 310 0 204 309 149 21 chr2 71322801 71322895 -181933688 - L2 LINE L2 -14 3299 3194 1758 170 31 0 chr2 71323050 71323339 -181933244 + AluJb SINE Alu 1 298 -14 2415 94 0 0 chr2 71324025 71324334 -181932249 - AluSg SINE Alu -1 309 1 587 326 79 28 chr2 71324441 71324898 -181931685 + L2 LINE L2 1838 2317 -997 1623 166 11 0 chr2 71324943 71325214 -181931369 - AluJb SINE Alu -38 274 1 482 171 0 0 chr2 71325299 71325375 -181931208 - MER5A DNA MER1_type -113 76 1 292 305 171 0 chr2 71325567 71325672 -181930911 + L2 LINE L2 3146 3268 -4 341 324 129 43 chr2 71325683 71326264 -181930319 + L2 LINE L2 2440 3084 -188 718 206 116 7 chr2 71326455 71326610 -181929973 - MER5A DNA MER1_type 0 189 18 205 330 128 48 chr2 71326720 71326993 -181929590 + L2 LINE L2 3019 3313 0 43 85 0 0 chr2 71329791 71329897 -181926686 + GC_rich Low_complexity Low_complexity 1 106 0 207 227 30 15 chr2 71330330 71330396 -181926187 + GA-rich Low_complexity Low_complexity 2 68 0 270 73 0 0 chr2 71331547 71331588 -181924995 + (TG)n Simple_repeat Simple_repeat 1 41 0 186 103 0 0 chr2 71331813 71331842 -181924741 + (TC)n Simple_repeat Simple_repeat 2 30 0 207 146 0 49 chr2 71331847 71331888 -181924695 + (CCCCCT)n Simple_repeat Simple_repeat 5 43 0 255 347 113 8 chr2 71332683 71333063 -181923520 - L2 LINE L2 -643 2671 2252 2053 130 3 10 chr2 71333209 71333508 -181923075 + AluSx SINE Alu 3 299 -13 182 250 56 42 chr2 71335481 71335553 -181921030 + MIR SINE MIR 31 103 -105 663 218 61 0 chr2 71335559 71335706 -181920877 - MER3 DNA MER1_type 0 209 54 21 0 0 0 chr2 71335879 71335900 -181920683 + AT_rich Low_complexity Low_complexity 1 21 0 2251 88 11 0 chr2 71335900 71336185 -181920398 + AluSg SINE Alu 1 288 -22 360 0 0 0 chr2 71336187 71336227 -181920356 + (TA)n Simple_repeat Simple_repeat 2 41 0 22 0 0 0 chr2 71336404 71336426 -181920157 + AT_rich Low_complexity Low_complexity 1 22 0 2181 114 7 3 chr2 71336583 71336890 -181919693 + AluSc SINE Alu 1 308 -1 246 265 79 26 chr2 71337833 71338022 -181918561 - L1ME LINE L1 -214 5907 5709 2590 52 3 0 chr2 71338034 71338342 -181918241 - AluY SINE Alu -2 309 1 1592 191 3 14 chr2 71338357 71338640 -181917943 - AluJb SINE Alu -32 280 1 2030 86 0 0 chr2 71339894 71340151 -181916432 + AluY SINE Alu 38 294 -17 30 45 0 0 chr2 71340760 71340804 -181915779 + AT_rich Low_complexity Low_complexity 1 44 0 21 57 0 0 chr2 71340936 71340971 -181915612 + AT_rich Low_complexity Low_complexity 1 35 0 2327 104 0 0 chr2 71341946 71342292 -181914291 - AluSx SINE Alu 0 350 5 255 329 0 13 chr2 71342991 71343067 -181913516 - MIR SINE MIR -186 76 2 21 0 0 0 chr2 71344062 71344083 -181912500 + AT_rich Low_complexity Low_complexity 1 21 0 5584 151 52 10 chr2 71344732 71345009 -181911574 + L1PB4 LINE L1 4113 4377 -1779 192 40 0 0 chr2 71345009 71345034 -181911549 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 5584 151 52 10 chr2 71345034 71346715 -181909868 + L1PB4 LINE L1 4377 6156 0 802 236 0 0 chr2 71347213 71347374 -181909209 + FAM SINE Alu 4 164 -11 2539 44 0 41 chr2 71347610 71347930 -181908653 - AluY SINE Alu -4 307 1 860 205 0 0 chr2 71347990 71348146 -181908437 + FRAM SINE Alu 1 156 -10 951 345 0 83 chr2 71348146 71348471 -181908112 - AluJb SINE Alu -4 298 1 350 273 0 36 chr2 71348518 71348628 -181907955 + MIR3 SINE MIR 98 203 -5 24 32 0 0 chr2 71348854 71348885 -181907698 + AT_rich Low_complexity Low_complexity 1 31 0 2229 83 38 7 chr2 71348911 71349201 -181907382 - AluSc SINE Alu -10 299 1 1019 149 0 7 chr2 71349245 71349399 -181907184 + FRAM SINE Alu 16 168 -8 609 52 0 31 chr2 71349567 71349664 -181906919 + (TTTC)n Simple_repeat Simple_repeat 3 96 0 198 352 0 14 chr2 71350975 71351046 -181905537 + L3b LINE CR1 1362 1431 -152 570 63 13 0 chr2 71351071 71351150 -181905433 - MADE1 DNA Mariner 0 80 1 729 189 8 0 chr2 71351388 71351515 -181905068 + FLAM_C SINE Alu 2 129 -4 1140 156 24 24 chr2 71352824 71353029 -181903554 - AluJo SINE Alu -21 291 87 1540 127 133 10 chr2 71353343 71353643 -181902940 + MER44D DNA MER2_type 1 607 -2 916 131 0 0 chr2 71353920 71354050 -181902533 + FLAM_C SINE Alu 14 143 0 240 283 0 0 chr2 71354222 71354275 -181902308 + MIR SINE MIR 100 152 -56 1610 137 118 11 chr2 71354599 71354870 -181901713 + AluSg SINE Alu 3 302 -8 192 384 47 32 chr2 71355027 71355217 -181901366 - MIR SINE MIR -51 211 19 2446 50 3 7 chr2 71355235 71355536 -181901047 + AluY SINE Alu 1 300 -11 1872 174 0 3 chr2 71355840 71356144 -181900439 - AluJb SINE Alu -9 303 1 738 209 0 8 chr2 71358249 71358383 -181898200 - AluJb SINE Alu -46 266 134 1761 157 33 10 chr2 71358383 71358688 -181897895 - AluJo SINE Alu 0 312 1 2328 68 7 3 chr2 71358725 71359021 -181897562 - AluY SINE Alu -14 297 1 351 0 0 0 chr2 71359182 71359221 -181897362 + (CA)n Simple_repeat Simple_repeat 1 78 0 351 0 0 0 chr2 71359221 71359260 -181897323 + (CA)n Simple_repeat Simple_repeat 2 40 0 2271 104 3 0 chr2 71359274 71359572 -181897011 - AluSp SINE Alu -14 299 1 12775 82 2 1 chr2 71359688 71361681 -181894902 - L1P3 LINE L1 -617 5537 3544 22 0 0 0 chr2 71362406 71362428 -181894155 + AT_rich Low_complexity Low_complexity 1 22 0 405 335 26 13 chr2 71362928 71363083 -181893500 + MIR SINE MIR 99 255 -7 2149 127 0 3 chr2 71363089 71363397 -181893186 + AluSx SINE Alu 1 307 -5 500 277 13 50 chr2 71365712 71365871 -181890712 - MER5A DNA MER1_type -1 188 36 2207 109 10 3 chr2 71366075 71366378 -181890205 + AluSx SINE Alu 6 310 -2 1424 127 44 13 chr2 71366998 71367226 -181889357 + AluJb SINE Alu 78 312 0 472 250 23 15 chr2 71367284 71367416 -181889167 - L1MD2 LINE L1 -197 6162 6030 276 77 0 0 chr2 71367857 71367896 -181888687 + (CA)n Simple_repeat Simple_repeat 2 40 0 566 299 92 14 chr2 71368311 71368518 -181888065 + MIR SINE MIR 34 256 -6 222 348 43 43 chr2 71368591 71368778 -181887805 - L3b LINE CR1 -110 1473 1287 295 154 0 0 chr2 71368797 71368849 -181887734 - MLT1I LTR MaLR -8 401 350 298 210 48 32 chr2 71368916 71369040 -181887543 + L1MC4 LINE L1 7916 8041 -1 882 293 59 19 chr2 71369049 71369370 -181887213 - MLT1I LTR MaLR -72 337 4 282 56 0 0 chr2 71369597 71369633 -181886950 + (CAGC)n Simple_repeat Simple_repeat 1 36 0 429 323 86 30 chr2 71369807 71370005 -181886578 - L2 LINE L2 -200 3072 2864 275 282 87 0 chr2 71370437 71370540 -181886043 - MIR SINE MIR -54 208 97 311 212 68 51 chr2 71370551 71370669 -181885914 + MIR SINE MIR 79 198 -64 28 29 0 0 chr2 71370832 71370867 -181885716 + AT_rich Low_complexity Low_complexity 1 35 0 1991 159 0 0 chr2 71371016 71371318 -181885265 - AluJb SINE Alu -8 304 3 1048 244 19 0 chr2 71371356 71371561 -181885022 - MIR SINE MIR -27 235 27 2218 110 7 0 chr2 71371564 71371865 -181884718 - AluSx SINE Alu -7 305 3 337 276 23 0 chr2 71372880 71372967 -181883616 - MIR3 SINE MIR -31 177 89 2351 110 0 0 chr2 71373137 71373438 -181883145 + AluSg SINE Alu 1 301 -9 542 211 97 0 chr2 71375924 71376038 -181880545 + FLAM_C SINE Alu 1 125 -8 1425 218 64 34 chr2 71376981 71377453 -181879130 + L1ME2 LINE L1 5679 6164 0 336 346 137 7 chr2 71377459 71377612 -181878971 + L1MC/D LINE L1 5485 5657 -2151 1764 147 77 7 chr2 71377811 71378084 -181878499 + AluJo SINE Alu 1 292 -20 228 135 0 0 chr2 71378084 71378121 -181878462 + (TG)n Simple_repeat Simple_repeat 2 38 0 2165 86 30 20 chr2 71378166 71378469 -181878114 - AluSg SINE Alu -4 306 1 911 141 0 7 chr2 71378470 71378605 -181877978 - AluSq/x SINE Alu -178 135 2 195 42 0 0 chr2 71378794 71378818 -181877765 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1846 174 0 31 chr2 71378824 71379146 -181877437 + AluJb SINE Alu 1 312 0 29 84 0 0 chr2 71379813 71379884 -181876699 + AT_rich Low_complexity Low_complexity 1 71 0 404 290 6 55 chr2 71380590 71380748 -181875835 - MIR SINE MIR -62 146 2 1379 165 72 40 chr2 71380836 71381182 -181875401 + MLT1A1 LTR MaLR 1 357 -8 754 224 65 9 chr2 71381639 71381853 -181874730 - L1ME LINE L1 -496 5668 5443 1841 250 166 31 chr2 71381858 71381875 -181874708 + L1M4 LINE L1 3117 3130 -3016 2253 126 0 0 chr2 71381875 71382184 -181874399 + AluSg SINE Alu 1 309 -1 1841 250 166 31 chr2 71382184 71383149 -181873434 + L1M4 LINE L1 3130 4258 -1888 2487 52 0 10 chr2 71383149 71383455 -181873128 + AluY SINE Alu 2 304 -7 1841 250 166 31 chr2 71383455 71383543 -181873040 + L1M4 LINE L1 4258 4333 -1813 297 250 11 0 chr2 71383627 71383715 -181872868 - L1ME LINE L1 -2406 5402 5314 2487 37 10 3 chr2 71384384 71384684 -181871899 - AluY SINE Alu -9 302 1 2118 121 10 3 chr2 71385335 71385641 -181870942 + AluSx SINE Alu 3 310 -2 1943 126 0 45 chr2 71385644 71385954 -181870629 + AluSx SINE Alu 1 296 -16 632 72 24 0 chr2 71386165 71386248 -181870335 - AluY SINE Alu -16 295 211 183 80 0 0 chr2 71386351 71386376 -181870207 + (A)n Simple_repeat Simple_repeat 1 25 0 316 314 83 0 chr2 71386392 71386513 -181870070 + MIR3 SINE MIR 67 197 -11 2195 114 7 0 chr2 71386527 71386824 -181869759 + AluSx SINE Alu 1 299 -13 1560 203 10 17 chr2 71387353 71387654 -181868929 - AluJo SINE Alu -13 299 1 1942 156 0 0 chr2 71387939 71388221 -181868362 + AluJo SINE Alu 1 282 -30 266 0 29 0 chr2 71388229 71388263 -181868320 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 190 218 167 13 chr2 71389558 71389636 -181866947 + L2 LINE L2 2614 2703 -611 250 219 12 49 chr2 71389773 71389855 -181866728 + L1ME4a LINE L1 333 411 -5659 327 85 0 0 chr2 71389972 71390019 -181866564 + (TATG)n Simple_repeat Simple_repeat 2 48 0 2282 98 0 0 chr2 71390074 71390370 -181866213 + AluSq SINE Alu 1 296 -17 715 280 90 46 chr2 71390426 71391274 -181865309 + L1ME4a LINE L1 370 1143 -4835 3464 225 114 27 chr2 71391341 71391521 -181865062 + L1ME4a LINE L1 3039 3202 -2878 2101 136 0 19 chr2 71391521 71391837 -181864746 + AluSx SINE Alu 1 310 -2 3464 225 114 27 chr2 71391837 71393160 -181863423 + L1ME4a LINE L1 3202 4674 -1406 2009 197 156 13 chr2 71393213 71393817 -181862766 + L1ME1 LINE L1 5468 6157 -9 315 324 146 47 chr2 71393825 71394311 -181862272 + L2 LINE L2 2734 3262 -10 228 192 77 26 chr2 71394685 71394763 -181861820 + L1ME4a LINE L1 4672 4753 -1327 35 41 0 0 chr2 71395083 71395132 -181861451 + AT_rich Low_complexity Low_complexity 1 49 0 330 295 161 57 chr2 71395148 71395446 -181861137 + L1ME4a LINE L1 5202 5530 -2212 1122 132 30 46 chr2 71395724 71395921 -181860662 - AluJo SINE Alu -32 280 87 448 303 63 17 chr2 71396198 71396373 -181860210 + MER5A DNA MER1_type 7 189 0 238 120 67 0 chr2 71396645 71396720 -181859863 + (TA)n Simple_repeat Simple_repeat 1 80 0 273 271 78 62 chr2 71397506 71397635 -181858948 + MER5B DNA MER1_type 48 178 0 884 198 51 0 chr2 71397756 71397933 -181858650 + MER5A DNA MER1_type 2 187 -2 390 345 64 13 chr2 71400458 71400693 -181855890 + L1ME4a LINE L1 5579 5825 -230 530 202 0 10 chr2 71400710 71400809 -181855774 + L2 LINE L2 3208 3305 -8 2051 127 6 19 chr2 71401226 71401541 -181855042 + AluSx SINE Alu 1 311 -1 623 230 0 14 chr2 71401558 71401697 -181854886 + FLAM_A SINE Alu 1 137 -5 358 252 157 0 chr2 71401697 71401812 -181854771 + MIR SINE MIR 60 192 -70 443 294 101 35 chr2 71401986 71402214 -181854369 + MIR SINE MIR 20 262 0 533 175 194 79 chr2 71402243 71402495 -181854088 - L1PA16 LINE L1 -12 6154 5874 242 28 111 0 chr2 71402685 71402721 -181853862 - Alu SINE Alu -96 204 165 * 1711 207 0 20 chr2 71402719 71403077 -181853506 + MLT1A1 LTR MaLR 15 365 0 1901 152 0 21 chr2 71403508 71403828 -181852755 - AluSx SINE Alu 0 314 1 980 318 29 59 chr2 71404340 71404534 -181852049 + L2 LINE L2 2216 2414 -900 2135 128 3 13 chr2 71404534 71404840 -181851743 - AluSx SINE Alu -5 307 5 980 318 29 59 chr2 71404840 71405123 -181851460 + L2 LINE L2 2414 2679 -635 422 308 60 64 chr2 71405126 71405360 -181851223 + L2 LINE L2 3078 3310 -3 23 54 0 0 chr2 71405619 71405656 -181850927 + AT_rich Low_complexity Low_complexity 1 37 0 2641 52 0 0 chr2 71406095 71406404 -181850179 - AluY SINE Alu -2 309 1 314 138 17 0 chr2 71406548 71406606 -181849977 + CT-rich Low_complexity Low_complexity 2 60 0 234 343 14 0 chr2 71407408 71407478 -181849105 - MIR SINE MIR -183 79 9 1211 226 69 25 chr2 71408522 71409026 -181847557 - MLT1F1 LTR MaLR -2 565 1 611 173 41 132 chr2 71409192 71409275 -181847308 + MER58 DNA MER1_type 1 90 -251 1824 132 7 28 chr2 71409275 71409599 -181846984 - AluSx SINE Alu 0 320 3 611 173 41 132 chr2 71409599 71409734 -181846849 + MER58 DNA MER1_type 90 200 -141 703 128 51 8 chr2 71410825 71410942 -181845641 - FLAM_A SINE Alu -3 139 18 2231 124 0 0 chr2 71411706 71412012 -181844571 - AluSg SINE Alu -4 306 1 306 0 0 0 chr2 71412469 71412503 -181844080 + (CAA)n Simple_repeat Simple_repeat 2 35 0 2023 102 11 7 chr2 71412685 71413015 -181843568 + AluSp SINE Alu 1 331 0 464 336 82 11 chr2 71413158 71413426 -181843157 + L1MEd LINE L1 554 840 -5279 21 0 0 0 chr2 71413494 71413515 -181843068 + AT_rich Low_complexity Low_complexity 1 21 0 279 307 138 0 chr2 71413566 71413755 -181842828 + L1ME3A LINE L1 5732 5946 -224 315 313 76 7 chr2 71413847 71414026 -181842557 + L1ME3A LINE L1 5971 6161 -9 240 295 19 0 chr2 71414174 71414279 -181842304 + L1M4 LINE L1 5128 5234 -912 23 78 0 0 chr2 71414377 71414428 -181842155 + AT_rich Low_complexity Low_complexity 1 51 0 2168 92 0 10 chr2 71414594 71414918 -181841665 + AluSq SINE Alu 1 313 0 2065 127 11 0 chr2 71415379 71415538 -181841045 - AluSx SINE Alu -23 289 124 189 0 0 0 chr2 71415538 71415559 -181841024 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 2065 127 11 0 chr2 71415559 71415683 -181840900 - AluSx SINE Alu -188 124 3 1585 246 122 39 chr2 71415753 71416847 -181839736 - L1ME3A LINE L1 0 6170 4981 3004 232 42 10 chr2 71416872 71417664 -181838919 - L1ME1 LINE L1 -10 6156 5340 1826 177 119 21 chr2 71417665 71418095 -181838488 - MLT1D LTR MaLR -2 503 32 1219 212 28 7 chr2 71418129 71418515 -181838068 - L1ME1 LINE L1 -812 5350 4957 1751 155 3 18 chr2 71418578 71418862 -181837721 + AluJb SINE Alu 1 280 -32 387 0 0 0 chr2 71418862 71418905 -181837678 + (CAAAA)n Simple_repeat Simple_repeat 5 47 0 2935 202 87 40 chr2 71419001 71419783 -181836800 + MER21B LTR ERV1 43 861 -2 459 289 67 9 chr2 71420390 71420529 -181836054 + MIR SINE MIR 5 151 -57 262 234 110 35 chr2 71421235 71421380 -181835203 - L1MC5 LINE L1 -101 7860 7705 219 69 0 0 chr2 71421389 71421418 -181835165 + (TG)n Simple_repeat Simple_repeat 2 30 0 645 274 14 0 chr2 71421547 71421766 -181834817 + L1MEc LINE L1 80 301 -6095 404 170 170 0 chr2 71421907 71422007 -181834576 - MER47A DNA MER2_type -237 129 13 1646 164 35 3 chr2 71423569 71423855 -181832728 + AluJo SINE Alu 1 295 -17 248 273 117 0 chr2 71424011 71424088 -181832495 + L2 LINE L2 3186 3271 -1 606 323 109 34 chr2 71424194 71424688 -181831895 - L2 LINE L2 -3 3310 2780 264 59 0 0 chr2 71424929 71424963 -181831620 + (A)n Simple_repeat Simple_repeat 1 34 0 201 159 0 0 chr2 71426549 71426593 -181829990 + (TA)n Simple_repeat Simple_repeat 1 44 0 2203 96 0 13 chr2 71427041 71427344 -181829239 + AluY SINE Alu 1 299 -12 478 226 123 20 chr2 71427494 71427640 -181828943 - MER58C DNA MER1_type -53 162 2 408 167 49 20 chr2 71427872 71427974 -181828609 - L1ME3A LINE L1 -9 6161 6057 391 135 177 0 chr2 71428052 71428148 -181828435 - L1ME3A LINE L1 -229 5941 5829 894 110 7 29 chr2 71428467 71428603 -181827980 + AluSq/x SINE Alu 1 133 -179 251 89 0 89 chr2 71428622 71428678 -181827905 + Alu SINE Alu 247 297 -4 1228 271 169 41 chr2 71428685 71429516 -181827067 - HAL1 LINE L1 -359 2148 1212 276 288 227 27 chr2 71429651 71429946 -181826637 - HAL1 LINE L1 -1570 937 584 1060 231 73 40 chr2 71430038 71430462 -181826121 - HAL1 LINE L1 -2060 447 10 759 174 15 0 chr2 71430738 71430870 -181825713 + AluJo SINE Alu 1 134 -178 2255 121 0 0 chr2 71430871 71431169 -181825414 + AluSc SINE Alu 1 298 -11 325 118 67 0 chr2 71431340 71431459 -181825124 + (TA)n Simple_repeat Simple_repeat 2 128 0 298 305 184 14 chr2 71432730 71432871 -181823712 + MIR SINE MIR 1 165 -97 2208 126 0 13 chr2 71433818 71434127 -181822456 + AluSx SINE Alu 1 305 -7 21 0 0 0 chr2 71434697 71434718 -181821865 + AT_rich Low_complexity Low_complexity 1 21 0 26 30 0 0 chr2 71435480 71435513 -181821070 + AT_rich Low_complexity Low_complexity 1 33 0 2146 121 0 10 chr2 71435518 71435824 -181820759 + AluSx SINE Alu 1 303 -9 31 0 0 0 chr2 71435988 71436019 -181820564 + AT_rich Low_complexity Low_complexity 1 31 0 243 0 0 0 chr2 71436188 71436215 -181820368 + (A)n Simple_repeat Simple_repeat 1 27 0 2249 92 0 7 chr2 71436215 71436519 -181820064 + AluSq SINE Alu 1 302 -11 2813 150 67 11 chr2 71437075 71437640 -181818943 - MER7C DNA MER2_type 0 602 6 567 248 68 22 chr2 71440898 71441120 -181815463 + L1MD3 LINE L1 7726 7957 -38 * 2462 207 60 51 chr2 71441114 71441881 -181814702 - L1MC4a LINE L1 -252 7556 6783 288 198 0 86 chr2 71442714 71442795 -181813788 - L2 LINE L2 0 3313 3240 824 304 50 8 chr2 71443371 71443730 -181812853 - L1MC4a LINE L1 -2117 5691 5318 21 0 0 0 chr2 71443923 71443944 -181812639 + AT_rich Low_complexity Low_complexity 1 21 0 246 143 0 0 chr2 71444198 71444240 -181812343 - U3 snRNA snRNA -175 42 1 2309 102 3 0 chr2 71444430 71444735 -181811848 - AluSx SINE Alu -4 308 3 734 275 30 30 chr2 71445067 71445303 -181811280 + MIR SINE MIR 27 262 0 327 167 15 15 chr2 71445532 71445598 -181810985 - L3 LINE CR1 -1 1576 1511 357 141 6 0 chr2 71446827 71446904 -181809679 - AluS SINE Alu -248 60 1 228 200 0 0 chr2 71446904 71446944 -181809639 + MER58 DNA MER1_type 2380 2419 -1 27 0 0 0 chr2 71446944 71446971 -181809612 + AT_rich Low_complexity Low_complexity 1 27 0 260 315 11 11 chr2 71447353 71447445 -181809138 - L1MC/D LINE L1 -2202 5606 5515 13294 109 11 1 chr2 71447537 71450856 -181805727 + L1PA8A LINE L1 2770 6118 -13 266 206 66 37 chr2 71450871 71451007 -181805576 - L1MC/D LINE L1 -773 5397 5258 731 248 0 99 chr2 71451084 71451163 -181805420 - MIR SINE MIR 0 262 177 1939 138 20 13 chr2 71451163 71451461 -181805122 - AluSx SINE Alu -12 300 1 731 248 0 99 chr2 71451461 71451623 -181804960 - MIR SINE MIR -85 177 45 522 243 81 65 chr2 71451674 71451859 -181804724 - MIR SINE MIR -70 192 5 631 307 111 50 chr2 71452460 71452663 -181803920 + L1ME3A LINE L1 5366 5555 -615 1960 130 0 27 chr2 71452663 71452955 -181803628 + AluSq SINE Alu 1 284 -29 631 307 111 50 chr2 71452955 71453276 -181803307 + L1ME3A LINE L1 5555 5922 -248 582 274 129 74 chr2 71453255 71453794 -181802789 - HAL1 LINE L1 -1475 1032 524 * 5621 189 91 34 chr2 71453794 71455114 -181801469 + Charlie1a DNA MER1_type 2 1246 -1515 2083 104 66 0 chr2 71455114 71455401 -181801182 + AluSx SINE Alu 1 306 -6 5621 189 91 34 chr2 71455401 71455418 -181801165 + Charlie1a DNA MER1_type 1246 1261 -1500 2636 43 0 0 chr2 71455418 71455721 -181800862 + AluY SINE Alu 9 311 0 5621 189 91 34 chr2 71455721 71455758 -181800825 + Charlie1a DNA MER1_type 1261 1455 0 582 274 129 74 chr2 71455758 71455867 -181800716 - HAL1 LINE L1 -1983 524 348 1524 198 20 67 chr2 71456300 71456463 -181800120 - MER58B DNA MER1_type -2079 341 172 1977 143 0 14 chr2 71456463 71456769 -181799814 - AluSx SINE Alu 0 302 1 1524 198 20 67 chr2 71456769 71456962 -181799621 - MER58B DNA MER1_type -2248 172 1 1439 163 41 21 chr2 71458342 71458638 -181797945 - MER61B LTR ERV1 -28 396 1 270 305 136 8 chr2 71458751 71458869 -181797714 - MER91A DNA MER1_type -42 154 22 2324 115 0 0 chr2 71459526 71459838 -181796745 - AluSx SINE Alu 0 312 1 2177 171 45 37 chr2 71459840 71460006 -181796577 - L1MC3 LINE L1 0 7808 7645 1811 97 4 0 chr2 71460006 71460243 -181796340 - AluSp SINE Alu -14 299 62 2177 171 45 37 chr2 71460243 71460621 -181795962 - L1MC3 LINE L1 -163 7645 7175 272 257 43 0 chr2 71460621 71460691 -181795892 - MLT1F1 LTR MaLR -456 111 39 1864 155 76 63 chr2 71460693 71461151 -181795432 - L1MC3 LINE L1 -686 7099 6636 2151 230 55 28 chr2 71461354 71461859 -181794724 + LTR40a LTR ERVL 1 519 0 1463 193 45 84 chr2 71461939 71462365 -181794218 - LTR37A LTR ERV1 0 426 18 2237 100 3 0 chr2 71462497 71462786 -181793797 + AluSx SINE Alu 1 290 -22 213 277 0 31 chr2 71463074 71463139 -181793444 + L2 LINE L2 3206 3268 -4 336 246 27 18 chr2 71463996 71464106 -181792477 + LTR67 LTR ERVL 440 550 -7 663 264 38 1 chr2 71464212 71464399 -181792184 - MIR SINE MIR 0 262 71 2262 166 114 7 chr2 71464439 71464861 -181791722 - MLT1C LTR MaLR 0 467 1 291 246 39 69 chr2 71465140 71465270 -181791313 + MIR SINE MIR 60 185 -77 2252 106 0 3 chr2 71465272 71465575 -181791008 - AluSx SINE Alu -10 302 1 372 216 138 0 chr2 71467149 71467265 -181789318 - MIR3 SINE MIR -21 187 56 21 36 0 0 chr2 71467804 71467832 -181788751 + AT_rich Low_complexity Low_complexity 1 28 0 1036 172 0 50 chr2 71468026 71468224 -181788359 - L1PA13 LINE L1 0 6163 5976 468 264 124 17 chr2 71469046 71469224 -181787359 - MIR SINE MIR -20 242 46 820 239 29 42 chr2 71469893 71470131 -181786452 - MIR SINE MIR -22 240 6 773 65 0 0 chr2 71470252 71470345 -181786238 - AluSp/q SINE Alu -12 301 209 864 296 30 9 chr2 71470377 71470610 -181785973 - MIR SINE MIR -12 250 13 269 315 0 87 chr2 71471173 71471240 -181785343 + L2 LINE L2 3134 3183 -89 1974 154 3 16 chr2 71471240 71471552 -181785031 - AluSx SINE Alu -2 310 3 269 315 0 87 chr2 71471552 71471633 -181784950 + L2 LINE L2 3183 3269 -3 308 299 255 16 chr2 71471863 71472247 -181784336 - L3 LINE CR1 -1 1576 1044 715 284 89 0 chr2 71472256 71472492 -181784091 - MIR SINE MIR -3 259 3 260 267 30 50 chr2 71472503 71472604 -181783979 - L3 LINE CR1 -540 1037 939 300 244 100 49 chr2 71472604 71472862 -181783721 - L1M2 LINE L1 -694 5457 5255 2171 128 0 7 chr2 71472947 71473245 -181783338 - AluSx SINE Alu -16 296 1 291 93 0 0 chr2 71473452 71473495 -181783088 + (CA)n Simple_repeat Simple_repeat 2 44 0 278 281 41 128 chr2 71473641 71473837 -181782746 + MIR3 SINE MIR 20 198 -10 887 29 0 0 chr2 71474172 71474275 -181782308 - L1PA4 LINE L1 -41 6114 6012 637 43 0 75 chr2 71474275 71474367 -181782216 + L1PA4 LINE L1 6069 6155 0 197 300 33 0 chr2 71474523 71474583 -181782000 - MIR3 SINE MIR -8 200 139 25 0 0 0 chr2 71474622 71474647 -181781936 + AT_rich Low_complexity Low_complexity 1 25 0 793 273 42 71 chr2 71474738 71475148 -181781435 - L1MC4 LINE L1 -3 8039 7642 2420 241 60 52 chr2 71475298 71476196 -181780387 - L1ME3 LINE L1 0 6162 5258 336 275 239 0 chr2 71476878 71477016 -181779567 - MER117 DNA MER1_type -26 171 1 26 0 0 0 chr2 71477371 71477397 -181779186 + AT_rich Low_complexity Low_complexity 1 26 0 7141 126 8 4 chr2 71477397 71478660 -181777923 - L1MA2 LINE L1 0 6304 5037 249 250 37 19 chr2 71478799 71478907 -181777676 + (TA)n Simple_repeat Simple_repeat 1 110 0 258 331 40 51 chr2 71478907 71479082 -181777501 - MIR SINE MIR -58 204 32 249 339 63 0 chr2 71479491 71479618 -181776965 - MIR SINE MIR -65 197 63 1997 135 0 28 chr2 71479618 71479937 -181776646 + AluSg SINE Alu 1 310 0 196 346 75 28 chr2 71480002 71480109 -181776474 - MER5A DNA MER1_type -76 113 2 260 299 24 90 chr2 71480763 71480930 -181775653 - L2 LINE L2 -208 3064 2909 240 35 0 0 chr2 71481904 71481933 -181774650 + (GA)n Simple_repeat Simple_repeat 2 30 0 192 97 0 0 chr2 71483269 71483300 -181773283 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 878 245 116 9 chr2 71483835 71484051 -181772532 + MIR SINE MIR 3 241 -21 453 122 0 0 chr2 71484913 71484987 -181771596 + (TTCTCC)n Simple_repeat Simple_repeat 5 78 0 1534 136 90 47 chr2 71485008 71485287 -181771296 - AluSq SINE Alu -3 310 20 253 250 0 31 chr2 71485561 71485625 -181770958 + MIR SINE MIR 85 146 -62 843 136 34 20 chr2 71485890 71486037 -181770546 - L1MA6 LINE L1 0 6300 6152 195 329 141 26 chr2 71486221 71486455 -181770128 + L2 LINE L2 2699 2959 -355 214 294 0 0 chr2 71486695 71486746 -181769837 + MIR SINE MIR 206 256 -6 190 64 0 85 chr2 71486828 71486875 -181769708 + (TTTTTA)n Simple_repeat Simple_repeat 6 48 0 232 51 0 0 chr2 71486875 71486914 -181769669 - L1PA2 LINE L1 0 6155 6117 728 171 26 0 chr2 71486915 71487032 -181769551 - FLAM_A SINE Alu -12 121 2 1971 105 0 0 chr2 71487781 71488038 -181768545 - AluSx SINE Alu -17 295 39 477 177 314 0 chr2 71491018 71491142 -181765441 + MER5B DNA MER1_type 16 178 0 185 327 19 0 chr2 71491369 71491421 -181765162 + MER5B DNA MER1_type 1 53 -125 330 237 134 0 chr2 71492727 71492824 -181763759 - L2 LINE L2 -13 3259 3150 403 226 8 16 chr2 71492873 71492997 -181763586 + CT-rich Low_complexity Low_complexity 1 123 0 1656 141 145 0 chr2 71495060 71495315 -181761268 + AluSx SINE Alu 1 292 -10 268 191 22 0 chr2 71495938 71496027 -181760556 + (TA)n Simple_repeat Simple_repeat 1 91 0 333 311 28 0 chr2 71496811 71496917 -181759666 + MIR3 SINE MIR 75 183 -25 990 89 8 0 chr2 71498275 71498399 -181758184 + AluSq/x SINE Alu 1 125 -187 3541 84 0 8 chr2 71498506 71498981 -181757602 - L1PA7 LINE L1 -5 6149 5679 3736 128 12 41 chr2 71698981 71699101 -181557482 - MER41B LTR ERV1 -14 621 499 1874 122 26 50 chr2 71699101 71699404 -181557179 + AluSq SINE Alu 1 296 -17 3736 128 12 41 chr2 71699404 71699922 -181556661 - MER41B LTR ERV1 -136 499 1 218 200 0 0 chr2 71700205 71700255 -181556328 + T-rich Low_complexity Low_complexity 1 50 0 37548 33 0 0 chr2 71700256 71705512 -181551071 - L1PA3 LINE L1 0 6155 900 2168 108 3 14 chr2 71705521 71705817 -181550766 - AluSg SINE Alu -17 293 1 1810 174 8 45 chr2 71705949 71706306 -181550277 - MER2 DNA MER2_type 0 344 1 5712 98 4 6 chr2 71706579 71707406 -181549177 + L1PB1 LINE L1 5345 6169 0 249 33 0 0 chr2 71707434 71707464 -181549119 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 741 144 0 0 chr2 71707464 71707589 -181548994 - L1MB5 LINE L1 -10 6164 6040 874 220 0 11 chr2 71707597 71707769 -181548814 - MLT1A2 LTR MaLR 0 374 205 2651 138 82 41 chr2 71707769 71708007 -181548576 - MER34C LTR ERV1 0 585 358 1882 164 0 14 chr2 71708007 71708300 -181548283 + AluJo SINE Alu 1 289 -23 546 16 0 0 chr2 71708301 71708364 -181548219 + (GGAA)n Simple_repeat Simple_repeat 2 64 0 2651 138 82 41 chr2 71708364 71708683 -181547900 - MER34C LTR ERV1 -226 359 3 882 208 28 61 chr2 71708687 71708768 -181547815 - MLT1A2 LTR MaLR -169 205 123 1243 208 143 16 chr2 71708768 71709090 -181547493 + MLT1A1 LTR MaLR 1 363 -2 882 208 28 61 chr2 71709090 71709220 -181547363 - MLT1A2 LTR MaLR -251 123 1 3023 186 46 59 chr2 71709220 71709810 -181546773 - L1MB7 LINE L1 -167 6017 5421 690 169 16 0 chr2 71709810 71709934 -181546649 - FLAM_C SINE Alu -3 130 5 3023 186 46 59 chr2 71709934 71710113 -181546470 - L1MB7 LINE L1 -763 5421 5279 1493 198 47 7 chr2 71710113 71710391 -181546192 - AluJo SINE Alu -21 291 3 3023 186 46 59 chr2 71710391 71710555 -181546028 - L1MB7 LINE L1 -905 5279 5114 3771 216 76 18 chr2 71710597 71711332 -181545251 - L1M4 LINE L1 -5588 954 156 2362 99 3 0 chr2 71711332 71711635 -181544948 - AluSc SINE Alu -5 304 1 3771 216 76 18 chr2 71711635 71711798 -181544785 - L1M4 LINE L1 -6386 156 4 872 280 95 11 chr2 71712326 71712769 -181543814 - L2 LINE L2 -5 3308 2829 27 29 0 0 chr2 71712871 71712905 -181543678 + AT_rich Low_complexity Low_complexity 1 34 0 668 182 0 7 chr2 71712909 71713052 -181543531 + CT-rich Low_complexity Low_complexity 4 145 0 200 281 0 16 chr2 71713116 71713180 -181543403 + L2 LINE L2 3249 3311 -2 * 246 273 143 0 chr2 71713177 71713254 -181543329 - MIR SINE MIR -76 132 45 248 174 0 0 chr2 71714769 71714815 -181541768 - MIR3 SINE MIR -4 204 159 375 339 40 40 chr2 71715043 71715217 -181541366 - MER91A DNA MER1_type -2 194 21 5284 54 6 5 chr2 71715467 71716492 -181540091 - MER11A LTR ERVK 0 1266 1 347 199 114 53 chr2 71716545 71716739 -181539844 + L1MC4a LINE L1 5713 5913 -1895 1327 167 155 8 chr2 71716739 71716991 -181539592 - AluJo SINE Alu -13 289 1 347 199 114 53 chr2 71716991 71717006 -181539577 + L1MC4a LINE L1 5913 5926 -1882 202 180 16 66 chr2 71717012 71717073 -181539510 + (CATATA)n Simple_repeat Simple_repeat 5 62 0 2125 158 99 10 chr2 71717684 71718077 -181538506 - MSTA LTR MaLR 0 428 1 204 40 0 0 chr2 71718120 71718145 -181538438 + (CA)n Simple_repeat Simple_repeat 2 26 0 225 256 0 0 chr2 71718580 71718623 -181537960 + (CA)n Simple_repeat Simple_repeat 2 44 0 399 278 46 23 chr2 71719064 71719280 -181537303 - L1ME LINE L1 -642 5479 5259 1550 128 8 0 chr2 71719783 71720018 -181536565 - L1PA16 LINE L1 -1 6165 5929 246 301 103 14 chr2 71720175 71720321 -181536262 - L1ME4a LINE L1 -11 6110 5952 760 275 5 36 chr2 71720443 71720665 -181535918 - L1ME3A LINE L1 -5 6165 5951 825 117 25 0 chr2 71720684 71720804 -181535779 - FLAM_C SINE Alu -20 123 1 1127 213 68 89 chr2 71720871 71721265 -181535318 + MLT1B LTR MaLR 5 390 0 1493 171 34 8 chr2 71723423 71723686 -181532897 - AluJb SINE Alu -30 282 13 1306 229 200 61 chr2 71724156 71724632 -181531951 + MLT1F1 LTR MaLR 1 567 0 1861 161 0 13 chr2 71724842 71725141 -181531442 + AluJo SINE Alu 1 295 -17 204 321 137 23 chr2 71725141 71725272 -181531311 + MER5B DNA MER1_type 33 178 0 547 300 66 16 chr2 71725506 71725749 -181530834 - MIR SINE MIR 0 262 8 304 284 0 0 chr2 71725897 71725971 -181530612 - MIR3 SINE MIR -52 156 83 2135 133 58 3 chr2 71726133 71726463 -181530120 + MER7A DNA MER2_type 1 346 0 2017 157 14 0 chr2 71726468 71726819 -181529764 - L1MB4 LINE L1 -12 6168 5813 2429 127 17 8 chr2 71726825 71727227 -181529356 - L1MB3 LINE L1 -1 6182 5777 7176 124 34 8 chr2 71727238 71728361 -181528222 + HSMAR2 DNA Mariner 2 1153 -149 888 151 7 0 chr2 71728363 71728502 -181528081 + FLAM_C SINE Alu 2 141 -2 982 118 59 0 chr2 71728512 71728664 -181527919 + HSMAR2 DNA Mariner 1139 1299 -3 1716 162 6 28 chr2 71728675 71728802 -181527781 - L1MB3 LINE L1 -378 5793 5665 2691 99 0 0 chr2 71728802 71729157 -181527426 - THE1A LTR MaLR 0 355 1 1716 162 6 28 chr2 71729157 71729350 -181527233 - L1MB3 LINE L1 -506 5665 5480 966 167 104 22 chr2 71729338 71729560 -181527023 - L1MB4 LINE L1 -356 5824 5585 * 1871 161 0 0 chr2 71733387 71733685 -181522898 + AluJo SINE Alu 15 312 0 561 306 48 5 chr2 71735419 71735628 -181520955 + MIR SINE MIR 44 261 -1 794 289 34 60 chr2 71736051 71736519 -181520064 - L2 LINE L2 0 3313 2858 2321 19 0 0 chr2 71736569 71736833 -181519750 + L1PA2 LINE L1 5888 6151 -4 21 0 0 0 chr2 71736999 71737020 -181519563 + AT_rich Low_complexity Low_complexity 1 21 0 716 198 25 0 chr2 71737020 71737141 -181519442 - FLAM_C SINE Alu -9 124 1 270 288 88 41 chr2 71737399 71737569 -181519014 - L2 LINE L2 -209 3063 2886 1865 150 0 25 chr2 71737687 71738001 -181518582 + AluJo SINE Alu 1 306 -6 6967 148 56 16 chr2 71838338 71839687 -181416896 - L1M4c LINE L1 -4219 2165 763 2751 168 18 40 chr2 71839829 71840400 -181416183 - L1MC3 LINE L1 -1164 6621 6064 842 279 4 4 chr2 71840419 71840656 -181415927 - AluSc SINE Alu -31 278 42 586 188 194 0 chr2 71842644 71842788 -181413795 + MER3 DNA MER1_type 2 126 -83 921 96 13 83 chr2 71842803 71842960 -181413623 + FRAM SINE Alu 12 157 -19 266 211 53 35 chr2 71842960 71843017 -181413566 - MER3 DNA MER1_type -123 86 29 391 154 0 39 chr2 71843438 71843519 -181413064 - MLT1A1 LTR MaLR -1 383 300 333 159 0 14 chr2 71843513 71843582 -181413001 - Alu SINE Alu 0 302 235 * 21 0 0 0 chr2 71843866 71843887 -181412696 + GC_rich Low_complexity Low_complexity 1 21 0 1208 115 23 6 chr2 71844127 71844301 -181412282 + AluSq SINE Alu 129 305 -8 659 195 0 0 chr2 71844522 71844645 -181411938 - AluJb SINE Alu -23 289 167 218 344 50 22 chr2 71844724 71844904 -181411679 - MIR SINE MIR -58 204 20 2040 136 3 0 chr2 71846854 71847155 -181409428 + AluSq SINE Alu 1 302 -11 626 175 150 87 chr2 71847160 71847339 -181409244 + L1MDa LINE L1 1374 1579 -4961 2069 136 7 0 chr2 71847339 71847634 -181408949 + AluSx SINE Alu 1 297 -15 626 175 150 87 chr2 71847634 71847740 -181408843 + L1MDa LINE L1 1579 1677 -4863 512 213 73 0 chr2 71847858 71848008 -181408575 + L1M4 LINE L1 5236 5396 -750 1526 68 0 15 chr2 71848063 71848269 -181408314 - L1PA8 LINE L1 0 6172 5970 1733 175 64 3 chr2 71848297 71848640 -181407943 - MLT1A1 LTR MaLR 0 365 2 198 103 0 0 chr2 71848957 71848986 -181407597 + (A)n Simple_repeat Simple_repeat 1 29 0 193 310 0 60 chr2 71849606 71849706 -181406877 - MIR SINE MIR -75 133 40 1929 61 0 4 chr2 71850306 71850537 -181406046 - AluY SINE Alu -15 296 67 719 260 85 21 chr2 71850538 71850773 -181405810 - L1ME1 LINE L1 -43 6123 5874 8596 59 0 7 chr2 71850916 71852045 -181404538 - L1P LINE L1 -4006 2140 1020 405 148 0 0 chr2 71852990 71853051 -181403532 - Alu SINE Alu -16 296 236 24 0 0 0 chr2 71853116 71853140 -181403443 + AT_rich Low_complexity Low_complexity 1 24 0 3705 87 4 5 chr2 71854490 71855045 -181401538 - L1P LINE L1 -2722 3424 2871 438 242 0 22 chr2 71855457 71855548 -181401035 + MER5A DNA MER1_type 7 95 -94 343 300 60 7 chr2 71855688 71855838 -181400745 - L2 LINE L2 -717 2597 2440 1674 143 18 7 chr2 71857894 71858173 -181398410 - AluJb SINE Alu -15 297 16 203 252 39 117 chr2 71860663 71860766 -181395817 - L2 LINE L2 0 3272 3178 608 200 0 32 chr2 71861117 71861242 -181395341 + MER58 DNA MER1_type 2 122 -219 455 302 91 53 chr2 71861524 71861921 -181394662 - L1MCc LINE L1 -5213 1210 799 265 264 28 107 chr2 71861959 71862137 -181394446 - L1MCc LINE L1 -5592 831 668 683 210 159 26 chr2 71862541 71862736 -181393847 - MER82 DNA MER2_type -155 498 278 505 174 51 0 chr2 71863186 71863284 -181393299 + LTR8A LTR ERV1 1 103 -624 838 279 118 64 chr2 71863981 71864404 -181392179 - MLT1L LTR MaLR -169 446 1 472 258 145 0 chr2 71864623 71864747 -181391836 - MIR SINE MIR -95 167 26 838 101 11 227 chr2 71864983 71865171 -181391412 - L1MC3 LINE L1 -7 7778 7551 1575 184 38 0 chr2 71865171 71865459 -181391124 - AluJb SINE Alu -13 299 1 838 101 11 227 chr2 71865459 71865514 -181391069 - L1MC3 LINE L1 -234 7551 7598 2262 103 0 3 chr2 71865514 71865826 -181390757 - AluSp SINE Alu -2 311 1 838 101 11 227 chr2 71865826 71865859 -181390724 - L1MC3 LINE L1 -186 7599 7561 983 147 11 33 chr2 71865883 71866067 -181390516 - AluSg/x SINE Alu -19 291 112 4787 99 27 83 chr2 71866193 71867132 -181389451 - SVA Other Other -69 1317 432 227 308 121 0 chr2 71867586 71867677 -181388906 + MIR3 SINE MIR 15 116 -92 578 271 91 15 chr2 71867735 71867934 -181388649 - MIR SINE MIR 0 262 49 253 281 7 37 chr2 71868270 71868405 -181388178 + CT-rich Low_complexity Low_complexity 2 132 0 265 226 107 12 chr2 71868576 71868660 -181387923 - MIR SINE MIR -105 157 66 379 244 0 0 chr2 71868683 71868761 -181387822 - MIR SINE MIR -56 206 129 465 259 76 122 chr2 71868769 71869113 -181387470 + L1M4 LINE L1 4502 4829 -1317 806 188 32 0 chr2 71869766 71869920 -181386663 - L1MC4a LINE L1 -195 7613 7455 855 139 0 0 chr2 71869932 71870069 -181386514 - FRAM SINE Alu 0 40 1 754 172 8 8 chr2 71870076 71870198 -181386385 - FLAM_C SINE Alu -20 123 2 806 172 16 70 chr2 71870198 71870384 -181386199 - FRAM SINE Alu -1 175 1 332 226 0 0 chr2 71870384 71870446 -181386137 - L1MC4 LINE L1 -491 7551 7490 285 172 62 0 chr2 71870446 71870510 -181386073 + MADE1 DNA Mariner 1 68 -12 624 212 85 42 chr2 71870516 71870705 -181385878 - L1MC4 LINE L1 -555 7487 7291 338 135 4 0 chr2 71870715 71870771 -181385812 - FLAM SINE Alu -15 118 74 2464 225 34 9 chr2 71871023 71871591 -181384992 - MER119 DNA MER1_type -1 582 1 405 167 18 79 chr2 71871718 71871832 -181384751 - MER104 DNA Tc2 -73 107 1 21 0 0 0 chr2 71872622 71872643 -181383940 + AT_rich Low_complexity Low_complexity 1 21 0 47 0 0 0 chr2 71872695 71872742 -181383841 + AT_rich Low_complexity Low_complexity 1 47 0 360 130 0 0 chr2 71873033 71873102 -181383481 + (TCTA)n Simple_repeat Simple_repeat 4 72 0 784 184 196 29 chr2 71873148 71873393 -181383190 + MLT1D LTR MaLR 74 359 -146 216 136 23 23 chr2 71873399 71873443 -181383140 - MER5A DNA MER1_type -142 47 4 385 333 0 0 chr2 71874374 71874533 -181382050 + A-rich Low_complexity Low_complexity 1 159 0 2033 36 0 9 chr2 71874547 71874790 -181381793 - L1PA4 LINE L1 -138 6017 5776 1678 102 121 11 chr2 71874790 71875055 -181381528 - AluSg SINE Alu -16 294 1 317 237 0 0 chr2 71875108 71875167 -181381416 + MER82 DNA MER2_type 1 59 -594 1322 158 6 73 chr2 71875294 71875623 -181380960 + AluJb SINE Alu 1 307 -5 198 206 0 0 chr2 71876042 71876105 -181380478 + G-rich Low_complexity Low_complexity 1 63 0 236 326 0 0 chr2 71876118 71876216 -181380367 + G-rich Low_complexity Low_complexity 1 98 0 526 290 159 7 chr2 71877260 71877398 -181379185 - MER91A DNA MER1_type -1 195 37 596 204 35 12 chr2 71877776 71877948 -181378635 - Charlie7 DNA MER1_type -3 2609 2434 381 190 18 20 chr2 71879394 71879505 -181377078 + AluS SINE Alu 1 62 -239 261 357 0 19 chr2 71879761 71879915 -181376668 + C-rich Low_complexity Low_complexity 4 154 0 4648 199 39 63 chr2 71880092 71881495 -181375088 + L1 LINE L1 3561 4929 -1217 6050 136 14 35 chr2 71881830 71882789 -181373794 - Tigger1 DNA MER2_type -1 2417 1479 2376 7 4 0 chr2 71882789 71883058 -181373525 - AluYa5 SINE Alu -5 306 37 6050 136 14 35 chr2 71883058 71883134 -181373449 - Tigger1 DNA MER2_type -939 1479 1403 964 286 63 41 chr2 71883266 71883767 -181372816 - L1MCc LINE L1 -4814 2129 1553 1645 167 7 20 chr2 71883767 71884061 -181372522 - AluJb SINE Alu -22 290 1 964 286 63 41 chr2 71884061 71884456 -181372127 - L1MCc LINE L1 -5390 1553 1168 243 196 214 0 chr2 71884834 71884890 -181371693 + MIR SINE MIR 183 250 -12 275 339 110 0 chr2 71885192 71885310 -181371273 - L2 LINE L2 -3 3269 3139 474 152 162 9 chr2 71885471 71885576 -181371007 - MER5B DNA MER1_type -51 127 7 267 339 112 33 chr2 71885685 71885806 -181370777 - L2 LINE L2 -427 2887 2777 369 0 0 0 chr2 71885806 71885847 -181370736 + (CA)n Simple_repeat Simple_repeat 1 41 0 267 339 112 33 chr2 71885847 71886091 -181370492 - L2 LINE L2 -537 2777 2493 295 196 29 29 chr2 71886258 71886360 -181370223 + AluSp SINE Alu 2 103 -200 1030 126 106 25 chr2 71887153 71887351 -181369232 - L1PB1 LINE L1 -31 6120 5907 489 293 41 14 chr2 71888334 71888481 -181368102 + MER5A DNA MER1_type 1 151 -38 209 207 0 52 chr2 71888577 71888635 -181367948 + L2 LINE L2 3259 3313 0 925 209 5 21 chr2 71889016 71889203 -181367380 - MER20 DNA MER1_type -5 214 31 3117 123 10 87 chr2 71892548 71893032 -181363551 - L1MB4 LINE L1 -67 6113 5684 2405 55 13 0 chr2 71893032 71893341 -181363242 - AluSp SINE Alu 0 313 1 3117 123 10 87 chr2 71893341 71893466 -181363117 - L1MB4 LINE L1 -496 5684 5551 706 77 10 0 chr2 71893484 71893588 -181362995 - L1MA2 LINE L1 0 6304 6200 2406 112 31 25 chr2 71893926 71894284 -181362299 + THE1B LTR MaLR 5 364 0 1133 172 68 11 chr2 71894326 71894722 -181361861 - MLT1D LTR MaLR 0 505 1 363 315 177 42 chr2 71895108 71895492 -181361091 - L2 LINE L2 -1 3271 2836 299 244 222 51 chr2 71895738 71895972 -181360611 - L2 LINE L2 -1005 2309 2036 1628 157 7 33 chr2 71896009 71896309 -181360274 + AluJo SINE Alu 7 298 -14 383 59 20 0 chr2 71896743 71896794 -181359789 + Alu SINE Alu 1 52 -249 225 65 0 0 chr2 71897853 71897884 -181358699 + (TG)n Simple_repeat Simple_repeat 2 32 0 1187 271 27 70 chr2 71898084 71898651 -181357932 + L2 LINE L2 2772 3313 0 288 260 39 0 chr2 71898673 71898750 -181357833 - MER116 DNA Mariner 0 80 1 362 143 0 0 chr2 71900331 71900387 -181356196 - Tigger1 DNA MER2_type -1236 1182 1127 227 0 0 0 chr2 71900389 71900415 -181356168 - Tigger1 DNA MER2_type -1260 1158 1133 1744 110 99 14 chr2 71900415 71900697 -181355886 - Tigger1 DNA MER2_type -1252 1166 861 1956 143 262 5 chr2 71900707 71901119 -181355464 - Tigger1 DNA MER2_type -1750 668 151 309 208 0 0 chr2 71901442 71901514 -181355069 + G-rich Low_complexity Low_complexity 1 72 0 3307 122 45 36 chr2 71901697 71902246 -181354337 - MER21A LTR ERV1 -2 929 376 798 175 226 9 chr2 71902251 71902468 -181354115 - MER21A LTR ERV1 -667 264 1 340 247 103 0 chr2 71904348 71904445 -181352138 + MIR SINE MIR 156 262 0 195 69 0 0 chr2 71905287 71905316 -181351267 + (A)n Simple_repeat Simple_repeat 1 29 0 189 107 0 0 chr2 71906030 71906058 -181350525 + (A)n Simple_repeat Simple_repeat 1 28 0 1559 147 4 13 chr2 71906572 71906810 -181349773 - AluSx SINE Alu -76 236 1 22 0 0 0 chr2 71907356 71907378 -181349205 + AT_rich Low_complexity Low_complexity 1 22 0 310 300 125 28 chr2 71907605 71907892 -181348691 + L2 LINE L2 2244 2558 -756 2725 89 3 19 chr2 71908114 71908484 -181348099 + THE1B LTR MaLR 1 364 0 851 290 94 34 chr2 71908484 71909166 -181347417 + L2 LINE L2 2580 3313 0 2515 145 34 74 chr2 71910623 71911217 -181345366 + MER4B LTR ERV1 1 570 -40 22 0 0 0 chr2 71911407 71911429 -181345154 + GC_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr2 71911739 71911765 -181344818 + AT_rich Low_complexity Low_complexity 1 26 0 2100 116 3 3 chr2 71912092 71912384 -181344199 + AluSx SINE Alu 1 292 -20 278 275 12 12 chr2 71912747 71912827 -181343756 + L2 LINE L2 3189 3268 -4 1765 203 0 0 chr2 71913301 71913611 -181342972 - AluJo SINE Alu -2 310 1 362 62 0 0 chr2 71913612 71913660 -181342923 - AluSq/x SINE Alu -168 134 87 1108 211 0 47 chr2 71913660 71913892 -181342691 - AluJo SINE Alu -91 221 1 214 282 65 32 chr2 71913894 71914018 -181342565 + L2 LINE L2 2311 2438 -876 2279 92 7 0 chr2 71914051 71914346 -181342237 - AluSp SINE Alu -16 297 1 195 100 0 0 chr2 71914532 71914562 -181342021 + (A)n Simple_repeat Simple_repeat 1 30 0 288 233 35 58 chr2 71914583 71914669 -181341914 + MER94 DNA DNA 47 130 -4 466 308 13 62 chr2 71915207 71915434 -181341149 + MER102b DNA MER1_type 126 341 0 21 71 0 0 chr2 71915866 71915908 -181340675 + AT_rich Low_complexity Low_complexity 1 42 0 1202 176 22 62 chr2 71916151 71916423 -181340160 + L1PA15-16 LINE L1 2300 2560 -4289 2245 101 3 7 chr2 71916444 71916742 -181339841 + AluSq SINE Alu 1 297 -16 415 94 47 0 chr2 71916750 71916814 -181339769 - MLT1B LTR MaLR -309 81 15 307 177 0 32 chr2 71916962 71917024 -181339559 - L2 LINE L2 -40 3232 3173 653 271 124 23 chr2 71917025 71917361 -181339222 - MLT1I LTR MaLR -5 404 34 1825 139 0 58 chr2 71917439 71917733 -181338850 - AluJo SINE Alu -35 277 1 247 260 29 115 chr2 71917750 71917854 -181338729 - MIR SINE MIR -130 132 38 1282 91 0 17 chr2 71918177 71918352 -181338231 - AluSx SINE Alu -138 174 3 435 222 0 19 chr2 71918886 71919048 -181337535 + (TG)n Simple_repeat Simple_repeat 1 159 0 836 170 26 0 chr2 71920104 71920257 -181336326 + AluJb SINE Alu 127 283 -29 213 39 0 0 chr2 71920259 71920285 -181336298 + (GA)n Simple_repeat Simple_repeat 1 26 0 426 103 51 39 chr2 71921418 71921496 -181335087 + AluJ/FRAM SINE Alu 228 306 -6 4276 245 38 17 chr2 71922547 71923918 -181332665 - L1MEd LINE L1 -2607 3522 2123 2977 208 56 13 chr2 71924209 71924821 -181331762 + MER82 DNA MER2_type 2 639 -14 427 218 228 16 chr2 71924962 71925155 -181331428 - HAL1 LINE L1 -614 1876 1643 348 89 71 0 chr2 71925156 71925212 -181331371 - AluSc SINE Alu 0 299 240 3221 137 70 66 chr2 71926003 71926727 -181329856 + LTR8A LTR ERV1 1 727 0 286 326 92 33 chr2 71927358 71927515 -181329068 - L1MEd LINE L1 -5478 641 470 2006 129 3 7 chr2 71927515 71927817 -181328766 - AluSp SINE Alu -12 301 1 286 326 92 33 chr2 71927817 71927843 -181328740 - L1MEd LINE L1 -5649 470 447 389 315 65 22 chr2 71928286 71928704 -181327879 - L1MEd LINE L1 -857 1633 1112 831 130 0 43 chr2 71928705 71928843 -181327740 + FLAM_C SINE Alu 2 133 0 956 166 12 6 chr2 71929596 71929759 -181326824 - FRAM SINE Alu -16 160 1 1343 157 25 42 chr2 71930502 71930788 -181325795 + AluJb SINE Alu 2 282 -30 181 273 30 15 chr2 71931914 71931980 -181324603 + L2 LINE L2 3246 3312 -1 394 280 60 12 chr2 71932156 71932324 -181324259 - MIR SINE MIR -13 249 74 207 234 47 0 chr2 71932958 71933022 -181323561 + (CA)n Simple_repeat Simple_repeat 1 67 0 22 0 0 0 chr2 71933256 71933278 -181323305 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr2 71933378 71933405 -181323178 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr2 71933486 71933507 -181323076 + GC_rich Low_complexity Low_complexity 1 21 0 5006 162 27 12 chr2 71933936 71934929 -181321654 - L1MB3 LINE L1 0 6183 5173 508 108 0 0 chr2 71935070 71935144 -181321439 + AluSp/q SINE Alu 228 301 -12 224 303 0 0 chr2 71935144 71935220 -181321363 + MIR SINE MIR 171 246 -16 427 278 40 21 chr2 71935324 71935539 -181321044 - MIR SINE MIR 0 262 45 1864 122 49 0 chr2 71935572 71935835 -181320748 - AluSx SINE Alu -36 276 1 885 151 0 0 chr2 71936924 71937050 -181319533 - FLAM_C SINE Alu -17 126 1 257 245 179 28 chr2 71937224 71937330 -181319253 + MARNA DNA Mariner 126 247 -339 2115 100 0 7 chr2 71937808 71938077 -181318506 - AluSx SINE Alu -45 267 1 1072 184 0 0 chr2 71938101 71938269 -181318314 - AluJb SINE Alu -13 299 132 276 149 0 0 chr2 71938269 71938316 -181318267 + (TG)n Simple_repeat Simple_repeat 1 47 0 35 0 0 0 chr2 71938317 71938352 -181318231 + AT_rich Low_complexity Low_complexity 1 35 0 627 51 57 40 chr2 71938352 71938529 -181318054 + (TA)n Simple_repeat Simple_repeat 1 180 0 21 0 0 0 chr2 71938708 71938729 -181317854 + AT_rich Low_complexity Low_complexity 1 21 0 1260 175 26 30 chr2 71939113 71939347 -181317236 + LTR8 LTR ERV1 457 689 -2 1728 181 13 3 chr2 71939349 71939647 -181316936 - MER82 DNA MER2_type -351 302 2 1231 153 263 15 chr2 71939665 71940004 -181316579 + LTR49 LTR ERV1 1 423 -172 * 1544 215 17 100 chr2 71939999 71940459 -181316124 - LTR8 LTR ERV1 -11 680 259 232 200 40 0 chr2 71941149 71941199 -181315384 + C-rich Low_complexity Low_complexity 6 57 0 531 0 0 0 chr2 71941507 71941566 -181315017 + (GA)n Simple_repeat Simple_repeat 2 60 0 407 269 58 24 chr2 71941708 71941916 -181314667 - L2 LINE L2 -8 3305 3091 1913 128 60 13 chr2 71941916 71942236 -181314347 + AluJo SINE Alu 1 312 0 1118 105 52 0 chr2 71942474 71942627 -181313956 + AluSx SINE Alu 1 161 -151 5796 104 81 82 chr2 71943169 71944291 -181312292 - Tigger3b DNA MER2_type 0 1231 111 1922 271 167 9 chr2 71944438 71945323 -181311260 - L2 LINE L2 -1037 2277 1253 627 266 77 19 chr2 71945326 71945533 -181311050 - MIR SINE MIR -42 220 2 377 286 18 48 chr2 71945641 71945809 -181310774 - MIR SINE MIR -79 183 21 514 216 220 26 chr2 71947102 71947375 -181309208 + L1MC4a LINE L1 5568 5893 -1915 1101 200 14 9 chr2 71947386 71947601 -181308982 + MER58A DNA MER1_type 9 224 0 22 0 0 0 chr2 71947868 71947890 -181308693 + AT_rich Low_complexity Low_complexity 1 22 0 2087 121 7 3 chr2 71948070 71948360 -181308223 - AluSx SINE Alu -21 291 1 375 232 30 20 chr2 71948563 71948662 -181307921 + L1MC4 LINE L1 7768 7867 -175 516 212 68 17 chr2 71949512 71949630 -181306953 + FLAM_A SINE Alu 4 127 -6 359 80 40 0 chr2 71950354 71950404 -181306179 - Tigger3b DNA MER2_type -1141 90 39 260 242 32 0 chr2 71951734 71951796 -181304787 - tRNA-Met-i tRNA tRNA -10 65 2 349 237 52 21 chr2 71955763 71955860 -181300723 + MER81 DNA DNA 1 100 -14 302 259 103 35 chr2 71956397 71956513 -181300070 - L2 LINE L2 -10 3303 3180 577 309 0 22 chr2 71957030 71957208 -181299375 + MIR SINE MIR 3 176 -86 1103 271 123 13 chr2 71957218 71957683 -181298900 + L2 LINE L2 763 1278 -2036 821 196 55 30 chr2 71957685 71957884 -181298699 - MLT1A1 LTR MaLR 0 365 162 839 181 111 0 chr2 71958111 71958282 -181298301 + MER20 DNA MER1_type 30 219 0 222 37 0 0 chr2 71958285 71958312 -181298271 + (TC)n Simple_repeat Simple_repeat 2 28 0 244 276 22 45 chr2 71960312 71960446 -181296137 - L2 LINE L2 -91 3222 3092 1748 162 7 0 chr2 71961623 71961931 -181294652 - AluJo SINE Alu -2 310 1 565 136 45 0 chr2 71962355 71962443 -181294140 - FLAM_A SINE Alu -28 114 23 180 74 130 93 chr2 71962812 71962866 -181293717 - MER5C DNA MER1_type -26 298 243 1993 121 3 0 chr2 71962958 71963248 -181293335 - AluJb SINE Alu -21 291 1 1459 185 0 30 chr2 71963505 71963807 -181292776 - AluJb SINE Alu -18 294 2 269 290 0 0 chr2 71964712 71964774 -181291809 + AluJb SINE Alu 106 167 -135 1579 143 210 9 chr2 71964816 71965144 -181291439 - MSTD LTR MaLR 0 396 3 237 244 61 87 chr2 71965402 71965517 -181291066 + L2 LINE L2 3156 3267 -5 1067 114 0 0 chr2 71966846 71966995 -181289588 - AluSc SINE Alu -160 149 1 1925 101 37 14 chr2 71967004 71967300 -181289283 - AluSc SINE Alu -6 303 1 797 186 0 0 chr2 71968020 71968144 -181288439 + FLAM_C SINE Alu 2 125 -18 487 274 32 16 chr2 71968164 71968288 -181288295 - L2 LINE L2 0 3313 3188 27 0 0 0 chr2 71968309 71968336 -181288247 + AT_rich Low_complexity Low_complexity 1 27 0 941 200 49 5 chr2 71968350 71968555 -181288028 - AluJo SINE Alu -22 290 77 23 0 0 0 chr2 71969499 71969522 -181287061 + AT_rich Low_complexity Low_complexity 1 23 0 417 207 33 0 chr2 71970047 71970145 -181286438 - MER5A DNA MER1_type -84 105 4 2097 92 0 43 chr2 71970214 71970518 -181286065 + AluSx SINE Alu 2 292 -20 1005 41 8 0 chr2 71970518 71970640 -181285943 + AluY SINE Alu 1 123 -188 24 32 0 0 chr2 71970640 71970671 -181285912 + AT_rich Low_complexity Low_complexity 1 31 0 271 303 126 0 chr2 71970671 71970790 -181285793 - MER5A DNA MER1_type -49 140 7 1141 239 156 32 chr2 71971049 71971459 -181285124 - MLT1J LTR MaLR -50 461 1 1032 55 0 73 chr2 71971518 71971682 -181284901 - FRAM SINE Alu 0 176 25 181 192 289 0 chr2 71972450 71972502 -181284081 - MER5C DNA MER1_type -5 319 253 1754 277 159 16 chr2 71973820 71974618 -181281965 - HAL1 LINE L1 -1593 914 3 2116 139 14 28 chr2 71975618 71975978 -181280605 - L1PA16 LINE L1 0 6166 5812 526 175 77 38 chr2 71976111 71976294 -181280289 + L1MEc LINE L1 1997 2186 -4210 694 289 61 18 chr2 71976295 71976624 -181279959 + L1MEc LINE L1 2527 2869 -3346 * 5935 134 13 1 chr2 71976622 71977534 -181279049 + L1PA16 LINE L1 5236 6157 -9 637 236 92 53 chr2 71977558 71977973 -181278610 + L1MEc LINE L1 2906 3336 -2879 22 35 0 0 chr2 71979315 71979344 -181277239 + AT_rich Low_complexity Low_complexity 1 29 0 793 135 0 0 chr2 71979350 71979461 -181277122 - FLAM_C SINE Alu -32 111 1 1396 147 0 72 chr2 71980117 71980424 -181276159 - AluJb SINE Alu -6 306 22 270 169 56 56 chr2 71980448 71980519 -181276064 - L1P LINE L1 -1096 5050 4980 7593 28 0 0 chr2 71980528 71982034 -181274549 - L1PA3 LINE L1 -4 6151 4641 1102 23 8 0 chr2 71982034 71982167 -181274416 - L1PA3 LINE L1 -3817 2329 2196 513 185 0 0 chr2 71982764 71982883 -181273700 + GA-rich Low_complexity Low_complexity 1 119 0 315 244 93 70 chr2 71983856 71984126 -181272457 + L1MC5 LINE L1 7612 7887 -74 10867 74 14 18 chr2 71985431 71987666 -181268917 + L1PA7 LINE L1 3866 6090 -64 1663 144 13 20 chr2 71987795 71988101 -181268482 + AluSx SINE Alu 1 304 -8 1987 109 32 0 chr2 71988277 71988561 -181268022 + AluSg SINE Alu 2 294 -16 252 0 0 0 chr2 71988830 71988858 -181267725 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1209 181 4 39 chr2 71988866 71989147 -181267436 - AluJo SINE Alu -37 275 5 2332 46 0 0 chr2 71989480 71989790 -181266793 + AluY SINE Alu 1 310 0 1161 216 92 10 chr2 71989974 71990279 -181266304 + MER58B DNA MER1_type 9 338 -3 1951 113 7 7 chr2 71992413 71992723 -181263860 + AluSx SINE Alu 2 311 0 739 86 0 0 chr2 71993784 71993877 -181262706 - AluSq/x SINE Alu -205 107 15 368 89 0 18 chr2 71993877 71993933 -181262650 - MLT1C LTR MaLR -349 118 64 1823 90 0 12 chr2 71994035 71994291 -181262292 + L1PB1 LINE L1 5897 6149 -2 644 139 15 29 chr2 71994304 71994441 -181262142 + L1PA13 LINE L1 1965 2099 -4688 2337 46 0 0 chr2 71994441 71994764 -181261819 + AluY SINE Alu 1 323 0 640 295 82 19 chr2 71994778 71995144 -181261439 - L1ME4a LINE L1 -216 5905 5517 675 240 20 0 chr2 71995261 71995407 -181261176 - MER5A DNA MER1_type -2 187 39 1853 159 3 0 chr2 71995748 71996050 -181260533 + AluJb SINE Alu 5 307 -5 700 147 39 8 chr2 71996077 71996206 -181260377 + L1M4 LINE L1 5476 5608 -576 737 198 0 0 chr2 71996209 71996330 -181260253 + FLAM_C SINE Alu 5 125 -8 1278 106 17 0 chr2 71996352 71996532 -181260051 + AluSq SINE Alu 1 183 -130 562 314 47 0 chr2 71997292 71997461 -181259122 + MIR SINE MIR 61 237 -25 184 316 92 0 chr2 71997485 71997561 -181259022 + L2 LINE L2 1374 1456 -1858 1787 189 15 3 chr2 71997652 71997980 -181258603 - L1PB4 LINE L1 -13 6143 5812 319 200 67 0 chr2 72000168 72000243 -181256340 - MER3 DNA MER1_type 0 209 130 1285 267 80 26 chr2 72000810 72001435 -181255148 - L2 LINE L2 -173 3140 2480 317 239 34 0 chr2 72001509 72001597 -181254986 + MER94 DNA DNA 42 132 -2 202 298 105 18 chr2 72002195 72002309 -181254274 + MIR SINE MIR 81 204 -58 270 251 46 88 chr2 72002438 72002647 -181253936 + L1MC/D LINE L1 3791 3993 -2153 21 36 0 0 chr2 72002806 72002834 -181253749 + AT_rich Low_complexity Low_complexity 1 28 0 352 274 49 24 chr2 72002841 72003005 -181253578 - L1ME4a LINE L1 -246 5875 5708 1539 181 67 11 chr2 72003233 72003815 -181252768 + L1MC/D LINE L1 4863 5484 -743 1475 177 37 20 chr2 72003816 72004116 -181252467 + AluJo SINE Alu 1 305 0 688 203 0 15 chr2 72004124 72004257 -181252326 + FLAM_C SINE Alu 2 132 -1 298 230 115 0 chr2 72004669 72004756 -181251827 + L2 LINE L2 2727 2823 -491 1832 220 55 53 chr2 72004756 72005269 -181251314 + LTR40a LTR ERVL 1 514 -5 534 285 140 0 chr2 72005281 72005488 -181251095 + L2 LINE L2 2832 3067 -246 814 143 71 7 chr2 72005509 72005649 -181250934 - AluJb SINE Alu -26 286 138 368 159 171 0 chr2 72005668 72005756 -181250827 - L1ME4a LINE L1 -2300 5508 5406 209 221 44 9 chr2 72005780 72005893 -181250690 + (TA)n Simple_repeat Simple_repeat 2 118 0 1426 111 0 99 chr2 72005923 72006166 -181250417 + AluSx SINE Alu 1 219 -93 856 298 92 39 chr2 72006900 72007847 -181248736 + L2 LINE L2 2302 3305 -8 281 277 28 35 chr2 72008307 72008448 -181248135 + GA-rich Low_complexity Low_complexity 1 140 0 808 241 0 0 chr2 72008450 72008591 -181247992 + MER45A DNA AcHobo 32 172 -6 387 276 30 15 chr2 72008970 72009104 -181247479 - MER5B DNA MER1_type -35 143 8 1813 146 0 29 chr2 72009284 72009592 -181246991 - AluJo SINE Alu -13 299 1 875 86 0 16 chr2 72009592 72009720 -181246863 + L1MB8 LINE L1 6048 6173 -5 212 282 56 0 chr2 72009852 72009923 -181246660 - L2 LINE L2 -285 2987 2913 195 42 0 0 chr2 72010089 72010113 -181246470 + (TCC)n Simple_repeat Simple_repeat 1 24 0 371 73 18 0 chr2 72010236 72010291 -181246292 + (TTCC)n Simple_repeat Simple_repeat 3 58 0 266 254 15 0 chr2 72010293 72010360 -181246223 - AluJ/FRAM SINE Alu -2 300 233 21 0 0 0 chr2 72010490 72010511 -181246072 + AT_rich Low_complexity Low_complexity 1 21 0 527 248 95 18 chr2 72010616 72010836 -181245747 + L1MC/D LINE L1 5517 5779 -453 1542 222 97 8 chr2 72011163 72011546 -181245037 + MER63B DNA MER1_type 1 417 -19 599 318 5 14 chr2 72012022 72012245 -181244338 + MIR SINE MIR 30 250 -12 22 0 0 0 chr2 72012526 72012548 -181244035 + AT_rich Low_complexity Low_complexity 1 22 0 328 246 0 15 chr2 72012600 72012730 -181243853 + CT-rich Low_complexity Low_complexity 3 130 0 299 254 61 27 chr2 72012973 72013113 -181243470 + MIR SINE MIR 56 195 -65 2151 123 0 10 chr2 72013122 72013424 -181243159 + AluY SINE Alu 1 299 -12 535 274 58 5 chr2 72013601 72013791 -181242792 + MIR SINE MIR 15 214 -48 206 227 0 76 chr2 72014560 72014626 -181241957 - L2 LINE L2 -5 3267 3207 307 231 13 13 chr2 72014715 72014793 -181241790 - MER116 DNA Mariner -1 79 2 513 270 179 5 chr2 72015136 72015332 -181241251 + MIR SINE MIR 2 231 -31 2025 143 3 13 chr2 72015464 72015779 -181240804 - AluSx SINE Alu 0 312 1 342 98 0 0 chr2 72016157 72016208 -181240375 + (TC)n Simple_repeat Simple_repeat 1 51 0 1408 285 103 20 chr2 72016699 72017603 -181238980 - L2 LINE L2 0 3313 2336 275 338 30 45 chr2 72017709 72017842 -181238741 - L2 LINE L2 -198 3074 2944 188 257 0 81 chr2 72018464 72018538 -181238045 + MIR SINE MIR 110 177 -85 180 293 0 0 chr2 72019027 72019068 -181237515 + MIR SINE MIR 51 91 -117 261 343 0 19 chr2 72019086 72019194 -181237389 + CT-rich Low_complexity Low_complexity 4 109 0 290 244 24 0 chr2 72020267 72020349 -181236234 + MIR3 SINE MIR 105 188 -20 2445 65 0 19 chr2 72021047 72021354 -181235229 - AluY SINE Alu -10 301 1 2122 112 3 7 chr2 72022000 72022306 -181234277 - AluSx SINE Alu 0 305 1 1049 286 91 29 chr2 72022645 72023373 -181233210 + L2 LINE L2 2539 3310 -3 1777 148 19 41 chr2 72024525 72024843 -181231740 - MLT1B LTR MaLR -79 311 1 2249 45 7 41 chr2 72025124 72025442 -181231141 - AluY SINE Alu 0 308 1 22 35 0 0 chr2 72025447 72025476 -181231107 + AT_rich Low_complexity Low_complexity 1 29 0 1794 118 0 0 chr2 72026483 72026720 -181229863 + AluSx SINE Alu 1 237 -75 2472 67 0 19 chr2 72026743 72027057 -181229526 + AluY SINE Alu 1 308 -3 14728 176 14 12 chr2 72028101 72031816 -181224767 - L1PB4 LINE L1 -2 6856 3133 4928 274 52 62 chr2 72031822 72033941 -181222642 - L1PB4 LINE L1 -4742 2107 10 428 317 12 139 chr2 72034255 72034665 -181221918 - L2 LINE L2 0 3272 2915 637 294 40 38 chr2 72034714 72035061 -181221522 - L2 LINE L2 -527 2787 2440 453 281 58 23 chr2 72036517 72036688 -181219895 + MIR SINE MIR 84 260 -2 233 137 68 14 chr2 72036689 72036762 -181219821 + (TTATA)n Simple_repeat Simple_repeat 4 80 0 997 282 139 9 chr2 72037059 72037484 -181219099 - L2 LINE L2 -1057 2257 1778 186 375 114 17 chr2 72037493 72037730 -181218853 - L2 LINE L2 -52 3220 2961 218 250 0 0 chr2 72037788 72037840 -181218743 + L2 LINE L2 3215 3266 -6 2240 102 3 7 chr2 72037966 72038271 -181218312 + AluSc SINE Alu 1 304 -5 190 242 113 32 chr2 72038347 72038409 -181218174 + L2 LINE L2 3208 3274 -39 249 33 0 0 chr2 72038541 72038571 -181218012 + (GA)n Simple_repeat Simple_repeat 1 30 0 258 239 0 0 chr2 72038727 72038798 -181217785 + (TA)n Simple_repeat Simple_repeat 2 72 0 301 173 0 0 chr2 72038805 72038857 -181217726 - L1MC4 LINE L1 -1339 6703 6652 273 324 106 35 chr2 72040661 72040831 -181215752 - L2 LINE L2 0 3272 3091 506 262 42 8 chr2 72041888 72042049 -181214534 + L1ME LINE L1 5504 5669 -452 580 172 10 10 chr2 72042248 72042347 -181214236 - Tigger7 DNA MER2_type 0 2587 2489 1439 167 0 0 chr2 72042375 72042590 -181213993 - Tigger7 DNA MER2_type -474 259 45 359 303 85 6 chr2 72042664 72042829 -181213754 + MIR SINE MIR 14 191 -71 22 0 0 0 chr2 72045964 72045986 -181210597 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 72046104 72046132 -181210451 + AT_rich Low_complexity Low_complexity 1 28 0 190 333 32 32 chr2 72046194 72046287 -181210296 - L2 LINE L2 -195 3077 2985 1986 138 9 28 chr2 72046561 72046880 -181209703 - AluSq SINE Alu 0 313 1 1267 217 96 13 chr2 72047904 72048218 -181208365 - MER58B DNA MER1_type 0 341 2 180 77 0 0 chr2 72049863 72049889 -181206694 + (CCAA)n Simple_repeat Simple_repeat 2 27 0 1091 226 0 0 chr2 72050115 72050314 -181206269 + MER3 DNA MER1_type 10 208 -1 269 302 62 62 chr2 72050153 72050332 -181206251 - MER3 DNA MER1_type 0 209 31 * 1378 64 6 0 chr2 72051282 72051455 -181205128 - AluSq SINE Alu -5 308 135 22 0 0 0 chr2 72052686 72052708 -181203875 + AT_rich Low_complexity Low_complexity 1 22 0 523 253 75 67 chr2 72052721 72053097 -181203486 - L1ME4a LINE L1 -10 6111 5733 241 268 43 58 chr2 72053919 72054057 -181202526 - MIR SINE MIR -46 216 81 195 42 0 0 chr2 72054144 72054168 -181202415 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 2086 135 0 0 chr2 72054178 72054466 -181202117 - AluSx SINE Alu -24 288 1 305 244 191 17 chr2 72054497 72054612 -181201971 + MER117 DNA MER1_type 54 188 -9 21 0 0 0 chr2 72055741 72055762 -181200821 + AT_rich Low_complexity Low_complexity 1 21 0 1079 243 141 21 chr2 72056691 72057309 -181199274 - L2 LINE L2 0 3313 2617 2517 82 0 0 chr2 72057963 72058269 -181198314 + AluY SINE Alu 1 306 -5 2233 79 3 46 chr2 72058986 72059289 -181197294 + AluY SINE Alu 1 290 -21 504 261 167 14 chr2 72060334 72060472 -181196111 - MER91A DNA MER1_type -1 195 37 610 214 29 12 chr2 72060852 72061025 -181195558 - Charlie7 DNA MER1_type -3 2609 2434 346 297 47 16 chr2 72063241 72063369 -181193214 - MIR3 SINE MIR -3 205 74 625 281 0 29 chr2 72063615 72063786 -181192797 + MER5B DNA MER1_type 1 166 -12 2333 91 0 3 chr2 72064419 72064715 -181191868 + AluSg SINE Alu 1 295 -15 579 210 49 43 chr2 72066793 72066955 -181189628 - MIR SINE MIR -16 246 84 351 248 56 24 chr2 72068275 72068400 -181188183 - MIR SINE MIR 0 262 134 2034 131 20 10 chr2 72068938 72069244 -181187339 + AluSx SINE Alu 2 310 -2 1372 111 106 0 chr2 72070296 72070504 -181186079 + MER30 DNA MER1_type 1 230 0 277 217 0 33 chr2 72071236 72071296 -181185287 - MLT1B LTR MaLR 0 390 333 310 266 40 52 chr2 72071983 72072156 -181184427 - L1ME LINE L1 -473 5648 5478 2400 174 33 17 chr2 72072168 72072628 -181183955 + MLT1C LTR MaLR 1 467 0 26 0 0 0 chr2 72072686 72072712 -181183871 + AT_rich Low_complexity Low_complexity 1 26 0 369 299 108 24 chr2 72072723 72073011 -181183572 - L1ME LINE L1 -748 5398 5087 438 164 45 4 chr2 72073373 72073474 -181183109 - MLT1G1 LTR MaLR -7 588 437 315 0 0 0 chr2 72073636 72073671 -181182912 + (GA)n Simple_repeat Simple_repeat 2 36 0 531 331 6 0 chr2 72073678 72073847 -181182736 - MLT1F1 LTR MaLR -397 170 1 415 313 72 6 chr2 72075507 72075673 -181180910 - MER102a DNA MER1_type -28 302 126 276 266 32 21 chr2 72076143 72076237 -181180346 - MER5B DNA MER1_type 0 178 84 2950 189 45 39 chr2 72076257 72076577 -181180006 - Charlie1 DNA MER1_type 0 2761 2444 2273 111 0 3 chr2 72076577 72076883 -181179700 + AluSg SINE Alu 1 305 -5 2950 189 45 39 chr2 72076883 72077276 -181179307 - Charlie1 DNA MER1_type -317 2444 2044 620 204 92 14 chr2 72077247 72077389 -181179194 - Charlie1 DNA MER1_type -2555 206 54 * 318 309 18 9 chr2 72077458 72077568 -181179015 + MIR3 SINE MIR 45 155 -53 257 355 95 32 chr2 72077591 72077780 -181178803 - MER20 DNA MER1_type -18 201 1 324 0 0 0 chr2 72077888 72077924 -181178659 + (TG)n Simple_repeat Simple_repeat 2 37 0 752 299 20 4 chr2 72078254 72078498 -181178085 + MIR SINE MIR 4 251 -11 250 284 135 28 chr2 72079541 72079682 -181176901 - MIR3 SINE MIR -18 190 35 384 149 68 0 chr2 72079875 72079949 -181176634 + L2 LINE L2 3235 3313 0 1961 154 9 12 chr2 72080272 72080609 -181175974 - L1PB1 LINE L1 -3 6148 5813 272 328 38 76 chr2 72080630 72080868 -181175715 + L2 LINE L2 3025 3253 -19 340 304 88 20 chr2 72081330 72081534 -181175049 - L2 LINE L2 -852 2462 2245 362 255 92 0 chr2 72082667 72082765 -181173818 - MIR SINE MIR 0 262 156 420 259 68 135 chr2 72082888 72083316 -181173267 + MLT1L LTR MaLR 108 611 -4 233 295 108 50 chr2 72083316 72083455 -181173128 - MIR SINE MIR -95 167 21 180 231 154 55 chr2 72084640 72084822 -181171761 + L2 LINE L2 3112 3311 -2 8723 113 12 8 chr2 72085348 72086643 -181169940 + HSMAR2 DNA Mariner 4 1302 0 194 306 24 105 chr2 72087164 72087373 -181169210 + MIR SINE MIR 53 244 -18 21 0 0 0 chr2 72087501 72087522 -181169061 + AT_rich Low_complexity Low_complexity 1 21 0 2391 226 28 11 chr2 72087817 72088356 -181168227 - MER119 DNA MER1_type 0 583 36 741 196 150 0 chr2 72088480 72088653 -181167930 + L1MC4 LINE L1 7477 7675 -367 816 161 61 28 chr2 72089447 72089627 -181166956 - MER53 DNA DNA -1 188 3 210 239 0 0 chr2 72089866 72089912 -181166671 - MIR SINE MIR -109 153 108 300 341 62 26 chr2 72090150 72090376 -181166207 - MIR SINE MIR -12 250 17 295 30 0 0 chr2 72090463 72090496 -181166087 - U2 snRNA snRNA -155 33 1 1704 217 108 117 chr2 72090506 72090989 -181165594 - L1MC4a LINE L1 -1608 6200 5727 1964 159 6 16 chr2 72090989 72091304 -181165279 - AluJb SINE Alu 0 312 1 1704 217 108 117 chr2 72091304 72091746 -181164837 - L1MC4a LINE L1 -2081 5727 5283 281 260 42 73 chr2 72094103 72094199 -181162384 + L2 LINE L2 3189 3281 -32 2455 71 3 0 chr2 72094203 72094500 -181162083 - AluSx SINE Alu -14 298 1 1883 128 0 0 chr2 72095230 72095487 -181161096 - AluSq SINE Alu -56 257 1 6754 196 149 25 chr2 72095487 72096902 -181159681 - L1PBa LINE L1 -4761 2102 399 2392 79 0 13 chr2 72096902 72097217 -181159366 - AluY SINE Alu 0 311 1 6754 196 149 25 chr2 72097217 72097667 -181158916 - L1PBa LINE L1 -6464 399 6 1696 154 219 0 chr2 72098057 72098408 -181158175 - MSTA LTR MaLR 0 428 1 658 177 24 0 chr2 72098571 72098695 -181157888 + L1MC4 LINE L1 6460 6586 -1456 786 178 0 15 chr2 72098697 72098832 -181157751 + FLAM_C SINE Alu 1 133 0 2292 220 66 6 chr2 72099807 72100307 -181156276 + MLT1F LTR MaLR 2 531 -11 3076 177 25 12 chr2 72100314 72101005 -181155578 - L1MB5 LINE L1 0 6174 5408 223 353 52 29 chr2 72101113 72101249 -181155334 - L2 LINE L2 0 3272 3134 348 313 16 16 chr2 72102005 72102133 -181154450 - L2 LINE L2 0 3272 3145 322 376 13 20 chr2 72102159 72102308 -181154275 - L2 LINE L2 -2 3270 3123 730 257 158 35 chr2 72102311 72102450 -181154133 + L2 LINE L2 975 1096 -2218 2062 72 0 8 chr2 72102450 72102713 -181153870 - AluY SINE Alu -7 304 44 730 257 158 35 chr2 72102713 72102939 -181153644 + L2 LINE L2 1096 1385 -1929 259 263 79 0 chr2 72103039 72103115 -181153468 + LTR33A LTR ERVL 80 161 -362 278 233 87 19 chr2 72103258 72103361 -181153222 + LTR33A LTR ERVL 412 521 -2 2840 278 124 38 chr2 72103364 72104402 -181152181 + L2 LINE L2 1386 2333 -980 2156 125 64 9 chr2 72104402 72104747 -181151836 + THE1B LTR MaLR 1 364 0 2840 278 124 38 chr2 72104747 72105499 -181151084 + L2 LINE L2 2333 3311 -2 2035 138 22 98 chr2 72106159 72106565 -181150018 - THE1C LTR MaLR 0 375 1 21 0 0 0 chr2 72107659 72107680 -181148903 + AT_rich Low_complexity Low_complexity 1 21 0 602 218 61 8 chr2 72107685 72107855 -181148728 - L1ME3 LINE L1 -3 6163 5978 360 265 87 100 chr2 72108740 72109136 -181147447 - MLT1L LTR MaLR -35 476 136 1118 207 18 31 chr2 72109158 72109380 -181147203 - MER20 DNA MER1_type 0 219 1 471 256 50 31 chr2 72109549 72109709 -181146874 - L1ME LINE L1 -5906 164 2 24 0 0 0 chr2 72110052 72110076 -181146507 + AT_rich Low_complexity Low_complexity 1 24 0 303 322 62 40 chr2 72113050 72113277 -181143306 + MLT1K LTR MaLR 357 588 0 1236 186 14 0 chr2 72113661 72113871 -181142712 - L1PA16 LINE L1 -17 6149 5937 10746 221 130 32 chr2 72113977 72118264 -181138319 - L1PA16 LINE L1 -436 5730 1028 7405 51 5 1 chr2 72118367 72119912 -181136671 - L1PA6 LINE L1 -164 5990 4443 1307 143 9 31 chr2 72121348 72121571 -181135012 + AluJo SINE Alu 87 304 -8 333 325 81 8 chr2 72124834 72124957 -181131626 + MIR SINE MIR 61 192 -70 304 282 39 36 chr2 72125591 72125768 -181130815 - MIR SINE MIR -66 142 16 1162 248 77 3 chr2 72126873 72127183 -181129400 + L1MC4 LINE L1 7526 7858 -184 * 5105 232 40 31 chr2 72127181 72129067 -181127516 + L1MA4 LINE L1 16 2599 -4966 14814 160 15 43 chr2 72129075 72133216 -181123367 + L1MA4 LINE L1 3703 7718 -1 1991 124 50 0 chr2 72133456 72133738 -181122845 - AluSx SINE Alu -16 296 1 183 80 0 0 chr2 72134065 72134090 -181122493 + (TG)n Simple_repeat Simple_repeat 1 25 0 61 0 0 0 chr2 72134175 72134236 -181122347 + AT_rich Low_complexity Low_complexity 1 61 0 188 263 0 0 chr2 72134602 72134640 -181121943 + MIR SINE MIR 78 115 -147 2117 112 0 7 chr2 72136532 72136851 -181119732 + AluSx SINE Alu 1 317 0 278 211 0 0 chr2 72137207 72137283 -181119300 + L1ME LINE L1 4628 4703 -1443 849 159 0 36 chr2 72137322 72137460 -181119123 + FLAM_C SINE Alu 1 133 0 351 219 41 0 chr2 72137474 72137547 -181119036 + MLT1G1 LTR MaLR 1 76 -519 242 310 119 30 chr2 72137788 72138091 -181118492 + L1ME LINE L1 5384 5713 -408 558 226 28 0 chr2 72139217 72139323 -181117260 - MER81 DNA DNA 0 114 6 198 317 100 17 chr2 72139486 72139606 -181116977 + L3 LINE CR1 1052 1181 -396 21 36 0 0 chr2 72140276 72140304 -181116279 + AT_rich Low_complexity Low_complexity 1 28 0 497 286 104 10 chr2 72142352 72142544 -181114039 - MER63A DNA MER1_type 0 210 1 23 33 0 0 chr2 72143606 72143636 -181112947 + AT_rich Low_complexity Low_complexity 1 30 0 227 276 0 0 chr2 72146080 72146138 -181110445 - MIR3 SINE MIR -12 196 139 1273 211 4 18 chr2 72146304 72146531 -181110052 + MER58A DNA MER1_type 1 224 0 235 289 67 33 chr2 72146647 72146737 -181109846 + L2 LINE L2 3175 3267 -5 22 94 0 0 chr2 72147011 72147075 -181109508 + AT_rich Low_complexity Low_complexity 1 64 0 189 216 39 0 chr2 72147339 72147390 -181109193 + L2 LINE L2 3261 3313 0 579 155 15 167 chr2 72147989 72148207 -181108376 + L1MA10 LINE L1 5988 6334 0 222 379 16 16 chr2 72148313 72148437 -181108146 - MIR SINE MIR -48 214 91 308 289 70 23 chr2 72149123 72149251 -181107332 - MIR SINE MIR -51 211 78 243 0 0 0 chr2 72149473 72149500 -181107083 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 222 174 0 0 chr2 72150695 72150741 -181105842 + CT-rich Low_complexity Low_complexity 4 49 0 398 314 149 10 chr2 72151290 72151484 -181105099 - MIR SINE MIR -6 256 36 3378 84 18 14 chr2 72151733 72152175 -181104408 + MLT2A1 LTR ERVL 1 444 0 414 280 55 91 chr2 72154077 72154370 -181102213 - L1ME3A LINE L1 -205 5965 5697 2024 97 4 0 chr2 72154370 72154628 -181101955 + AluSg SINE Alu 1 259 -51 414 280 55 91 chr2 72154628 72154821 -181101762 - L1ME3A LINE L1 -473 5697 5499 831 304 58 11 chr2 72155038 72155597 -181100986 + L1M4 LINE L1 4465 5058 -1088 180 0 0 0 chr2 72155691 72155711 -181100872 + (A)n Simple_repeat Simple_repeat 1 20 0 2070 125 7 3 chr2 72155851 72156148 -181100435 - AluSx SINE Alu -14 298 1 301 295 111 13 chr2 72156901 72157065 -181099518 - MIR SINE MIR -62 146 1 298 345 86 0 chr2 72158817 72158933 -181097650 + L2 LINE L2 3128 3253 -19 218 225 11 112 chr2 72159744 72159833 -181096750 - L2 LINE L2 -12 3301 3222 * 476 237 53 40 chr2 72159831 72159983 -181096600 - MIR SINE MIR 0 262 109 199 329 0 59 chr2 72160180 72160265 -181096318 - L2 LINE L2 -1854 1460 1381 824 153 99 72 chr2 72160285 72160333 -181096250 + AluJo SINE Alu 85 130 -182 225 65 0 0 chr2 72160333 72160364 -181096219 + (CA)n Simple_repeat Simple_repeat 2 32 0 824 153 99 72 chr2 72160364 72160537 -181096046 + AluJo SINE Alu 130 312 0 459 281 0 0 chr2 72160666 72160780 -181095803 - MIR SINE MIR -121 141 28 27 29 0 0 chr2 72160833 72160867 -181095716 + AT_rich Low_complexity Low_complexity 1 34 0 200 276 0 17 chr2 72162209 72162267 -181094316 + MIR SINE MIR 100 156 -106 26 30 0 0 chr2 72162835 72162868 -181093715 + AT_rich Low_complexity Low_complexity 1 33 0 195 300 0 0 chr2 72163163 72163253 -181093330 + CT-rich Low_complexity Low_complexity 4 93 0 214 221 59 0 chr2 72163291 72163359 -181093224 + (TA)n Simple_repeat Simple_repeat 2 73 0 41 48 0 0 chr2 72163983 72164045 -181092538 + AT_rich Low_complexity Low_complexity 1 62 0 392 333 36 12 chr2 72165773 72165938 -181090645 + MIR SINE MIR 70 238 -24 258 189 0 0 chr2 72165983 72166036 -181090547 - MER116 DNA Mariner -27 53 1 1029 176 13 29 chr2 72166870 72167109 -181089474 + L1MB8 LINE L1 5943 6177 -1 330 343 63 23 chr2 72167233 72167408 -181089175 - L1MC4a LINE L1 -1923 5885 5704 194 273 0 0 chr2 72167553 72167597 -181088986 - L2 LINE L2 -25 3288 3245 339 309 64 37 chr2 72167751 72167942 -181088641 - MIR3 SINE MIR -1 207 3 262 225 79 22 chr2 72168249 72168338 -181088245 - MIR SINE MIR -70 138 45 13949 188 34 11 chr2 72169566 72169922 -181086661 - L1PB1 LINE L1 -3 6864 6517 288 0 0 0 chr2 72169922 72169954 -181086629 + (TA)n Simple_repeat Simple_repeat 2 33 0 13949 188 34 11 chr2 72169954 72170568 -181086015 - L1PB1 LINE L1 -350 6517 5918 225 0 0 0 chr2 72170568 72170593 -181085990 + (TTAA)n Simple_repeat Simple_repeat 3 27 0 13949 188 34 11 chr2 72170593 72173605 -181082978 - L1PB1 LINE L1 -949 5918 2975 2104 114 0 17 chr2 72173605 72173925 -181082658 - AluSx SINE Alu 0 315 1 13949 188 34 11 chr2 72173925 72174586 -181081997 - L1PB1 LINE L1 -3892 2975 2098 2212 131 0 0 chr2 72174586 72174898 -181081685 - AluSx SINE Alu 0 312 1 13949 188 34 11 chr2 72174898 72175008 -181081575 - L1PB1 LINE L1 -4769 2098 1992 1972 161 0 3 chr2 72275348 72275652 -180980931 - AluSx SINE Alu -6 306 4 21 0 0 0 chr2 72275652 72275673 -180980910 + AT_rich Low_complexity Low_complexity 1 21 0 1313 112 0 0 chr2 72275680 72275850 -180980733 + AluSp SINE Alu 130 299 -14 2208 131 0 3 chr2 72275949 72276255 -180980328 + AluSx SINE Alu 1 305 -7 2056 117 10 0 chr2 72276320 72276610 -180979973 + AluSx SINE Alu 1 293 -19 22 56 0 0 chr2 72276786 72276822 -180979761 + AT_rich Low_complexity Low_complexity 1 36 0 237 33 0 0 chr2 72276958 72276988 -180979595 + (CA)n Simple_repeat Simple_repeat 1 30 0 618 191 0 0 chr2 72277407 72277512 -180979071 - AluJb SINE Alu -83 229 125 236 190 35 17 chr2 72277537 72277595 -180978988 - L1MCa LINE L1 -4362 2064 2006 235 277 0 0 chr2 72277595 72277642 -180978941 + (CA)n Simple_repeat Simple_repeat 1 47 0 230 146 0 0 chr2 72277644 72277685 -180978898 + LTR66 LTR ERVL 398 438 -172 244 185 0 19 chr2 72277686 72277729 -180978854 + L1MC4 LINE L1 6660 6703 -1339 2181 105 7 0 chr2 72277729 72278015 -180978568 - AluSq SINE Alu -23 290 3 1279 169 112 61 chr2 72278037 72278315 -180978268 - AluJo SINE Alu -20 292 1 205 326 43 11 chr2 72278430 72278522 -180978061 + MIR SINE MIR 158 252 -10 2516 90 0 0 chr2 72279678 72279989 -180976594 + AluSx SINE Alu 1 311 -1 209 283 33 43 chr2 72280981 72281073 -180975510 + MIR SINE MIR 107 197 -65 181 237 0 0 chr2 72282950 72282988 -180973595 - MIR SINE MIR -64 144 107 873 151 0 0 chr2 72283116 72283242 -180973341 - FLAM_C SINE Alu -17 126 1 248 322 63 44 chr2 72283630 72283835 -180972748 + MIR SINE MIR 20 228 -34 306 271 35 24 chr2 72284347 72284432 -180972151 + MIR SINE MIR 23 108 -100 242 242 88 11 chr2 72284532 72284623 -180971960 + MIR3 SINE MIR 111 208 0 283 303 40 57 chr2 72284640 72284815 -180971768 - MER5B DNA MER1_type -6 172 1 2117 125 3 3 chr2 72285123 72285427 -180971156 + AluSc SINE Alu 1 304 -5 1579 246 122 4 chr2 72285438 72285987 -180970596 - HAL1 LINE L1 -863 1644 1031 1343 193 124 55 chr2 72285981 72286133 -180970450 - L1M4 LINE L1 -984 5162 5022 * 2100 122 3 13 chr2 72286133 72286436 -180970147 - AluSx SINE Alu -12 300 1 1343 193 124 55 chr2 72286436 72286759 -180969824 - L1M4 LINE L1 -1124 5022 4654 181 312 94 14 chr2 72287332 72287455 -180969128 + L3 LINE CR1 141 278 -1299 1834 68 52 8 chr2 72287455 72287705 -180968878 - L1PA11 LINE L1 -2 6172 5912 181 312 94 14 chr2 72287705 72287719 -180968864 + L3 LINE CR1 278 289 -1288 180 0 0 0 chr2 72287757 72287777 -180968806 + (TG)n Simple_repeat Simple_repeat 2 21 0 2039 141 0 22 chr2 72287951 72288270 -180968313 + AluSx SINE Alu 1 312 0 2026 100 39 7 chr2 72288272 72288553 -180968030 + AluSc SINE Alu 1 290 -19 1184 332 112 33 chr2 72288614 72289472 -180967111 + L3 LINE CR1 334 1286 -291 2430 94 0 0 chr2 72289472 72289779 -180966804 - AluSx SINE Alu -5 307 1 1184 332 112 33 chr2 72289779 72289938 -180966645 + L3 LINE CR1 1286 1431 -146 2162 110 7 3 chr2 72289963 72290392 -180966191 + AluSc SINE Alu 1 430 0 232 165 70 43 chr2 72290585 72290700 -180965883 - AluSg SINE Alu -182 118 1 1375 212 96 9 chr2 72290700 72290774 -180965809 - L1 LINE L1 -1435 4711 4645 1970 133 61 0 chr2 72290774 72291068 -180965515 - AluSx SINE Alu 0 312 1 1375 212 96 9 chr2 72291068 72291090 -180965493 - L1 LINE L1 -1501 4645 4626 2112 134 0 3 chr2 72291090 72291388 -180965195 - AluSx SINE Alu -15 297 1 1375 212 96 9 chr2 72291388 72291729 -180964854 - L1 LINE L1 -1520 4626 4235 1061 268 112 42 chr2 72293048 72293398 -180963185 + L2 LINE L2 2773 3153 -160 1826 150 66 0 chr2 72293398 72293684 -180962899 - AluJb SINE Alu -7 305 1 1061 268 112 42 chr2 72293684 72293851 -180962732 + L2 LINE L2 3153 3307 -6 207 0 0 0 chr2 72293956 72293979 -180962604 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 345 309 87 50 chr2 72294132 72294562 -180962021 - L2 LINE L2 -52 3220 2777 1798 147 30 110 chr2 72294605 72295034 -180961549 + L1MD2 LINE L1 5952 6346 -13 697 54 0 0 chr2 72296161 72296254 -180960329 - AluSg/x SINE Alu -1 309 217 2181 79 0 0 chr2 72296254 72296520 -180960063 - AluSg SINE Alu -44 266 1 860 172 24 24 chr2 72296920 72297089 -180959494 + MER20 DNA MER1_type 1 169 -50 407 245 141 12 chr2 72297838 72298085 -180958498 + L1ME4a LINE L1 5666 6167 -4 21 57 0 0 chr2 72298134 72298169 -180958414 + AT_rich Low_complexity Low_complexity 1 35 0 542 128 0 0 chr2 72299254 72299332 -180957251 + Tigger1 DNA MER2_type 530 607 -1811 2230 95 3 11 chr2 72299747 72300066 -180956517 - AluSx SINE Alu 0 317 1 6314 102 13 26 chr2 72300096 72300872 -180955711 + Tigger1 DNA MER2_type 664 1426 -992 2108 134 0 3 chr2 72300872 72301170 -180955413 - AluSx SINE Alu -13 299 3 6314 102 13 26 chr2 72301170 72301346 -180955237 + Tigger1 DNA MER2_type 1426 1603 -815 199 331 218 0 chr2 72301958 72302091 -180954492 - MIR3 SINE MIR -13 195 34 733 169 0 37 chr2 72302099 72302235 -180954348 - FLAM_A SINE Alu -4 138 8 2444 91 3 0 chr2 72302254 72302561 -180954022 - AluSg SINE Alu -2 308 1 391 262 126 47 chr2 72302683 72302897 -180953686 - L1MD2 LINE L1 -2 6357 6127 216 0 0 0 chr2 72302976 72303000 -180953583 + (CACCC)n Simple_repeat Simple_repeat 5 28 0 194 191 21 0 chr2 72303164 72303211 -180953372 + MIR SINE MIR 94 141 -67 621 264 72 5 chr2 72304398 72304591 -180951992 - L1MD2 LINE L1 -216 6143 5938 320 249 141 14 chr2 72304707 72304920 -180951663 + L1ME4a LINE L1 5879 6118 -3 226 317 61 0 chr2 72305391 72305473 -180951110 + MIR SINE MIR 14 100 -162 315 0 0 0 chr2 72305624 72305659 -180950924 + (TA)n Simple_repeat Simple_repeat 2 36 0 315 0 0 0 chr2 72305658 72305693 -180950890 + (CA)n Simple_repeat Simple_repeat 2 36 0 23 33 0 0 chr2 72306567 72306597 -180949986 + AT_rich Low_complexity Low_complexity 1 30 0 407 218 84 45 chr2 72306623 72306648 -180949935 + L1M4 LINE L1 3104 3127 -3019 1971 135 10 3 chr2 72306648 72306951 -180949632 + AluSx SINE Alu 1 305 -7 407 218 84 45 chr2 72306951 72307104 -180949479 + L1M4 LINE L1 3127 3289 -2857 2379 92 10 0 chr2 72307297 72307602 -180948981 + AluSp SINE Alu 1 308 -5 584 251 62 110 chr2 72307844 72308359 -180948224 + L2 LINE L2 2766 3260 -12 1521 172 0 0 chr2 72309263 72309496 -180947087 - AluJo SINE Alu -7 305 73 399 234 30 87 chr2 72310060 72310291 -180946292 - L1MC4 LINE L1 -1 8041 7824 2646 198 46 29 chr2 72310330 72310962 -180945621 - L1ME2 LINE L1 -13 6151 5509 265 305 108 36 chr2 72310974 72311197 -180945386 + L2 LINE L2 2821 3059 -213 286 325 12 0 chr2 72311483 72311563 -180945020 + L2 LINE L2 3188 3268 -4 233 317 141 40 chr2 72311569 72311958 -180944625 + L2 LINE L2 2712 3196 -76 309 160 0 0 chr2 72312987 72313037 -180943546 - MER96B DNA MER1_type? 0 417 368 729 156 21 28 chr2 72313039 72313180 -180943403 + MER96B DNA MER1_type? 171 310 -107 1906 92 46 4 chr2 72313185 72313446 -180943137 + AluSq SINE Alu 1 272 -41 218 327 180 14 chr2 72313570 72313787 -180942796 - L2 LINE L2 -821 2493 2241 243 0 0 0 chr2 72314760 72314787 -180941796 + (ATG)n Simple_repeat Simple_repeat 2 28 0 306 218 177 86 chr2 72315485 72315705 -180940878 - L1M4 LINE L1 -2319 3827 3588 3037 201 66 44 chr2 72315910 72316731 -180939852 - L1MD3 LINE L1 0 8041 7217 5689 97 16 26 chr2 72317326 72318174 -180938409 - Tigger1 DNA MER2_type -2 2416 1577 1844 178 0 13 chr2 72318445 72318748 -180937835 + AluJb SINE Alu 1 299 -13 1915 156 0 7 chr2 72319719 72320020 -180936563 + AluJo SINE Alu 14 312 0 1485 156 42 49 chr2 72320650 72320938 -180935645 - AluJo SINE Alu -26 286 1 2353 100 0 0 chr2 72321942 72322232 -180934351 - AluSc SINE Alu -19 290 1 325 203 16 0 chr2 72323724 72323788 -180932795 - L2 LINE L2 0 3272 3208 187 310 194 35 chr2 72324285 72324801 -180931782 - L2 LINE L2 -1390 1924 1327 844 98 16 16 chr2 72325186 72325308 -180931275 + MLT1A1 LTR MaLR 1 122 -243 4218 175 66 22 chr2 72325524 72326764 -180929819 + L1MB7 LINE L1 4838 6143 -41 786 205 12 0 chr2 72327012 72327183 -180929400 + AluSq SINE Alu 135 307 -6 441 165 132 0 chr2 72327183 72327274 -180929309 + MER96B DNA MER1_type? 315 417 0 479 258 66 45 chr2 72328126 72328256 -180928327 + L1ME LINE L1 5565 5702 -419 2222 112 16 0 chr2 72328256 72328559 -180928024 + AluSx SINE Alu 1 308 -4 479 258 66 45 chr2 72328559 72328626 -180927957 + L1ME LINE L1 5702 5766 -355 2009 110 19 44 chr2 72328626 72328943 -180927640 + AluSx SINE Alu 1 309 -3 1155 144 0 6 chr2 72328964 72329131 -180927452 + FAM SINE Alu 1 166 -9 1270 153 42 107 chr2 72329230 72329538 -180927045 + AluJo SINE Alu 4 291 -21 1691 130 3 60 chr2 72329848 72330003 -180926580 + MER96B DNA MER1_type? 1 130 -287 2229 109 7 0 chr2 72330003 72330306 -180926277 - AluSq SINE Alu -8 305 1 1691 130 3 60 chr2 72330306 72330465 -180926118 + MER96B DNA MER1_type? 130 297 -120 2333 56 0 14 chr2 72330873 72331161 -180925422 - L1PA14 LINE L1 0 6161 5878 325 240 42 21 chr2 72331575 72331671 -180924912 - MIR SINE MIR -40 222 125 818 292 119 64 chr2 72333198 72333341 -180923242 + L2 LINE L2 1570 1704 -1610 1782 68 4 8 chr2 72333341 72333578 -180923005 - AluY SINE Alu -13 298 63 818 292 119 64 chr2 72333578 72333834 -180922749 + L2 LINE L2 1704 1944 -1370 1685 164 3 27 chr2 72333834 72334133 -180922450 + AluJb SINE Alu 1 292 -20 818 292 119 64 chr2 72334133 72334729 -180921854 + L2 LINE L2 1944 2621 -693 238 330 10 10 chr2 72335285 72335382 -180921201 + MIR3 SINE MIR 101 197 -11 2186 88 54 7 chr2 72335636 72335932 -180920651 - AluSg SINE Alu 0 310 1 1886 152 10 17 chr2 72336231 72336528 -180920055 + AluJo SINE Alu 1 295 -17 252 232 63 63 chr2 72336696 72336791 -180919792 - MER5A DNA MER1_type -78 111 17 345 140 0 0 chr2 72336903 72336960 -180919623 + (TG)n Simple_repeat Simple_repeat 1 57 0 567 255 65 16 chr2 72337574 72337758 -180918825 + MIR3 SINE MIR 16 208 0 21 0 0 0 chr2 72339233 72339254 -180917329 + AT_rich Low_complexity Low_complexity 1 21 0 1672 165 20 20 chr2 72339268 72339565 -180917018 - AluJb SINE Alu -15 297 1 2083 110 7 3 chr2 72340400 72340691 -180915892 - AluSp SINE Alu -21 292 1 517 205 98 8 chr2 72341676 72341798 -180914785 - FLAM_C SINE Alu 0 133 1 863 182 47 47 chr2 72342449 72342663 -180913920 - AluJo SINE Alu -16 296 83 2463 98 0 0 chr2 72342706 72343013 -180913570 + AluSp SINE Alu 1 307 -6 2475 197 35 14 chr2 72343698 72344205 -180912378 - L1ME1 LINE L1 0 6166 5649 185 290 172 0 chr2 72344614 72344707 -180911876 - MIR3 SINE MIR -8 200 92 1255 102 0 6 chr2 72345147 72345313 -180911270 + AluSx SINE Alu 1 165 -147 1517 122 27 0 chr2 72345313 72345535 -180911048 + AluSg/x SINE Alu 85 312 0 271 162 88 15 chr2 72345950 72346039 -180910544 + MIR SINE MIR 49 147 -62 2152 114 7 7 chr2 72346296 72346595 -180909988 - AluSq SINE Alu -14 299 1 1535 195 0 30 chr2 72346595 72346898 -180909685 - AluJo SINE Alu -18 294 1 216 304 81 20 chr2 72347305 72347453 -180909130 - MIR SINE MIR -51 211 55 454 305 20 26 chr2 72347565 72347716 -180908867 - MIR3 SINE MIR -20 188 39 2135 92 61 3 chr2 72348415 72348709 -180907874 - AluSq SINE Alu -2 311 1 321 68 0 0 chr2 72348771 72348815 -180907768 + (TG)n Simple_repeat Simple_repeat 2 45 0 988 142 25 19 chr2 72348817 72348979 -180907604 + L1PA16 LINE L1 6003 6165 -1 208 265 169 0 chr2 72349098 72349181 -180907402 + MIR SINE MIR 97 193 -69 334 271 128 45 chr2 72349405 72349538 -180907045 + MIR3 SINE MIR 3 146 -62 258 139 0 0 chr2 72349545 72349581 -180907002 + AluSx SINE Alu 1 36 -266 788 193 6 50 chr2 72349581 72349742 -180906841 - AluJo SINE Alu -119 193 40 1918 105 11 4 chr2 72349885 72350161 -180906422 + AluSx SINE Alu 22 299 -13 4411 120 14 3 chr2 72350886 72351538 -180905045 + L1MB3 LINE L1 5523 6181 -2 207 0 0 0 chr2 72351616 72351639 -180904944 + (CA)n Simple_repeat Simple_repeat 1 23 0 1774 126 7 46 chr2 72351639 72351924 -180904659 - AluJo SINE Alu -25 287 14 315 242 136 15 chr2 72352436 72352568 -180904015 - MIR SINE MIR -58 204 57 2316 96 0 0 chr2 72352913 72353206 -180903377 - AluSx SINE Alu -19 293 1 2179 130 0 3 chr2 72353208 72353516 -180903067 - AluSx SINE Alu -5 307 1 1135 0 0 0 chr2 72353747 72353870 -180902713 + AluY SINE Alu 178 300 -11 627 279 120 46 chr2 72354244 72354779 -180901804 - L2 LINE L2 -1 3271 2683 245 250 250 0 chr2 72356051 72356175 -180900408 - MIR3 SINE MIR -24 184 30 22 0 0 0 chr2 72356214 72356236 -180900347 + AT_rich Low_complexity Low_complexity 1 22 0 1833 113 38 17 chr2 72356962 72357255 -180899328 - AluSq SINE Alu -14 299 1 24 32 0 0 chr2 72357535 72357566 -180899017 + AT_rich Low_complexity Low_complexity 1 31 0 558 91 0 57 chr2 72358032 72358120 -180898463 + L1MB2 LINE L1 6034 6116 -55 1866 155 3 10 chr2 72358511 72358801 -180897782 - AluJo SINE Alu -22 290 3 300 91 0 0 chr2 72358993 72359037 -180897546 + (TG)n Simple_repeat Simple_repeat 2 45 0 2376 100 0 0 chr2 72359847 72360146 -180896437 - AluSx SINE Alu -13 299 1 291 396 94 15 chr2 72360614 72360955 -180895628 - L2 LINE L2 -3 3269 2902 4592 117 1 14 chr2 72362279 72362935 -180893648 - L1PA14 LINE L1 0 6161 5514 349 235 282 20 chr2 72364196 72364345 -180892238 - MIR3 SINE MIR -6 202 15 237 293 0 24 chr2 72364617 72364699 -180891884 - L1ME LINE L1 -241 5880 5801 306 223 29 48 chr2 72364713 72364816 -180891767 - L1ME LINE L1 -375 5746 5646 525 239 51 7 chr2 72365160 72365298 -180891285 + MIR3 SINE MIR 40 183 -25 2404 63 0 17 chr2 72365567 72365868 -180890715 - AluY SINE Alu -14 297 2 205 152 43 0 chr2 72366727 72366773 -180889810 + (CTGGGG)n Simple_repeat Simple_repeat 4 51 0 282 116 0 0 chr2 72366853 72366896 -180889687 + (CTG)n Simple_repeat Simple_repeat 1 43 0 1643 184 3 26 chr2 72367569 72367874 -180888709 - AluJb SINE Alu -14 298 1 499 166 1 108 chr2 72368095 72368252 -180888331 + L1MC5 LINE L1 5701 5776 -386 1806 208 41 103 chr2 72368668 72368996 -180887587 + L1MC5 LINE L1 6612 6880 -1081 1946 151 13 9 chr2 72368996 72369313 -180887270 + 7SLRNA srpRNA srpRNA 1 318 -2 1806 208 41 103 chr2 72369313 72369642 -180886941 + L1MC5 LINE L1 6880 7228 -733 518 213 49 78 chr2 72369847 72370091 -180886492 + L1MC5 LINE L1 7298 7534 -427 1494 198 18 4 chr2 72370102 72370375 -180886208 + AluJo SINE Alu 14 290 -22 265 205 118 52 chr2 72370396 72370625 -180885958 + L1MC5 LINE L1 7459 7702 -259 2373 69 7 10 chr2 72370657 72370962 -180885621 - AluSc SINE Alu -5 304 1 187 111 22 22 chr2 72371243 72371288 -180885295 + (CTG)n Simple_repeat Simple_repeat 2 46 0 196 377 51 7 chr2 72371596 72371734 -180884849 + L2 LINE L2 2912 3055 -217 2128 117 3 25 chr2 72372596 72372912 -180883671 - AluSx SINE Alu -3 309 1 1182 269 68 53 chr2 72373796 72374283 -180882300 + MLT1J LTR MaLR 1 494 -17 2445 96 0 0 chr2 72374767 72375079 -180881504 + AluSx SINE Alu 1 312 0 429 274 60 48 chr2 72375165 72375333 -180881250 + MIR SINE MIR 21 190 -72 498 243 114 31 chr2 72376048 72376303 -180880280 + LTR16B LTR ERVL 175 450 -14 729 188 0 53 chr2 72376484 72376617 -180879966 - FLAM_A SINE Alu -5 128 3 2044 135 7 0 chr2 72376650 72376976 -180879607 - AluSx SINE Alu 0 312 1 186 43 0 0 chr2 72377368 72377391 -180879192 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 21 36 0 0 chr2 72378669 72378697 -180877886 + AT_rich Low_complexity Low_complexity 1 28 0 1035 87 0 0 chr2 72378725 72378851 -180877732 - AluSq/x SINE Alu -186 126 1 318 280 40 0 chr2 72381324 72381424 -180875159 + MIR SINE MIR 92 195 -67 263 309 14 65 chr2 72384708 72384847 -180871736 + L2 LINE L2 2917 3048 -224 202 221 250 15 chr2 72385473 72385541 -180871042 + L2 LINE L2 3188 3271 -1 606 249 102 62 chr2 72385669 72386042 -180870541 - L1MEd LINE L1 -5221 898 511 227 128 81 23 chr2 72386426 72386512 -180870071 + (TATAA)n Simple_repeat Simple_repeat 4 94 0 790 259 59 9 chr2 72386693 72386913 -180869670 - MIR SINE MIR 0 262 32 497 208 154 31 chr2 72387327 72387457 -180869126 + MER58B DNA MER1_type 196 341 0 780 129 76 8 chr2 72387858 72387990 -180868593 + L1MA3 LINE L1 6165 6305 0 1209 253 120 0 chr2 72388012 72388388 -180868195 - L2 LINE L2 -24 3289 2869 544 262 146 10 chr2 72388578 72388784 -180867799 - MIR SINE MIR -21 241 8 229 328 109 16 chr2 72389667 72389795 -180866788 + MIR3 SINE MIR 35 174 -34 264 290 16 0 chr2 72390735 72390797 -180865786 + MER2 DNA MER2_type 282 344 -1 2132 131 0 0 chr2 72391227 72391524 -180865059 + AluSx SINE Alu 6 302 -10 395 250 50 14 chr2 72391628 72391768 -180864815 - MIR SINE MIR -22 240 96 2372 84 7 3 chr2 72392744 72393043 -180863540 - AluSx SINE Alu -12 300 1 4232 154 31 22 chr2 72393179 72393847 -180862736 + L1MB7 LINE L1 5443 6120 -64 2179 124 0 3 chr2 72393847 72394154 -180862429 - AluSx SINE Alu -6 306 1 4232 154 31 22 chr2 72394154 72394220 -180862363 + L1MB7 LINE L1 6120 6184 0 322 310 19 77 chr2 72394256 72394411 -180862172 - MER5A DNA MER1_type -7 182 37 195 318 45 0 chr2 72394352 72394418 -180862165 + MER5A DNA MER1_type 103 171 -18 * 544 269 143 5 chr2 72394475 72394665 -180861918 + MIR SINE MIR 37 252 -10 206 302 16 0 chr2 72394691 72394754 -180861829 - L2 LINE L2 -5 3267 3204 962 263 140 45 chr2 72395535 72396178 -180860405 + HAL1 LINE L1 1692 2395 -112 197 204 255 20 chr2 72396355 72396453 -180860130 + L2 LINE L2 3146 3266 -6 24 53 0 0 chr2 72397270 72397308 -180859275 + AT_rich Low_complexity Low_complexity 1 38 0 225 296 17 26 chr2 72397312 72397427 -180859156 - L1MC5 LINE L1 -40 7921 7808 1062 183 52 12 chr2 72397535 72397787 -180858796 - L1ME2 LINE L1 -2 6162 5901 1869 137 39 3 chr2 72398746 72399031 -180857552 - AluJb SINE Alu -12 300 6 204 266 65 65 chr2 72399031 72399146 -180857437 - MIR SINE MIR -35 227 110 1918 132 17 7 chr2 72399505 72399800 -180856783 + AluJb SINE Alu 1 298 -14 333 0 0 0 chr2 72400690 72400707 -180855876 + (CA)n Simple_repeat Simple_repeat 1 54 0 333 0 0 0 chr2 72400707 72400744 -180855839 + (CA)n Simple_repeat Simple_repeat 1 37 0 683 252 31 149 chr2 72402048 72402637 -180853946 - Charlie8 DNA MER1_type -2182 235 1 195 208 208 14 chr2 72402637 72402709 -180853874 - MIR3 SINE MIR -48 160 75 330 291 17 51 chr2 72402841 72403016 -180853567 - MIR SINE MIR -44 218 50 2757 229 60 27 chr2 72403029 72403760 -180852823 - L1ME1 LINE L1 -3 6163 5409 2338 94 0 3 chr2 72404051 72404349 -180852234 + AluSc SINE Alu 1 297 -12 1004 158 6 23 chr2 72404354 72404531 -180852052 + FRAM SINE Alu 1 168 -8 210 250 21 0 chr2 72405290 72405338 -180851245 + MIR SINE MIR 92 140 -122 2443 94 0 0 chr2 72405353 72405662 -180850921 + AluSg SINE Alu 1 309 -1 189 270 0 0 chr2 72406078 72406115 -180850468 + MIR SINE MIR 31 67 -195 229 267 27 0 chr2 72406460 72406535 -180850048 - Charlie8 DNA MER1_type 0 2417 2341 615 258 72 23 chr2 72406590 72406811 -180849772 - Charlie8 DNA MER1_type -2142 275 44 1466 45 6 6 chr2 72408480 72408657 -180847926 + AluY SINE Alu 128 304 -7 2765 172 34 55 chr2 72408657 72409615 -180846968 + L1MB3 LINE L1 4709 5650 -530 1221 226 31 73 chr2 72409615 72410000 -180846583 + MLT2B3 LTR ERVL 1 369 -185 817 141 47 59 chr2 72410050 72410220 -180846363 + MLT2B3 LTR ERVL 376 543 -11 2847 151 2 4 chr2 72410227 72410685 -180845898 + L1MB3 LINE L1 5646 6102 -81 507 113 21 31 chr2 72410795 72410892 -180845691 + L1MB3 LINE L1 6087 6182 -1 220 268 14 42 chr2 72410894 72410965 -180845618 + MIR SINE MIR 46 114 -148 482 146 0 37 chr2 72411830 72411912 -180844671 + MER21B LTR ERV1 12 90 -773 3218 233 76 8 chr2 72411932 72412669 -180843914 + MER21B LTR ERV1 19 805 -58 207 0 0 0 chr2 72413129 72413152 -180843431 + (CAAAAA)n Simple_repeat Simple_repeat 3 25 0 1488 212 123 39 chr2 72413186 72413648 -180842935 + MLT1D LTR MaLR 3 503 -2 385 321 23 8 chr2 72414342 72414473 -180842110 + L2 LINE L2 3134 3266 -6 803 176 0 0 chr2 72414534 72414659 -180841924 + AluSq/x SINE Alu 1 125 -188 651 116 35 75 chr2 72414659 72414759 -180841824 + L1MB5 LINE L1 6012 6080 -94 541 216 78 0 chr2 72414759 72414875 -180841708 - FLAM_A SINE Alu -8 125 1 651 116 35 75 chr2 72414875 72414967 -180841616 + L1MB5 LINE L1 6080 6174 0 937 228 23 23 chr2 72415106 72415325 -180841258 - MER20 DNA MER1_type 0 219 1 305 308 75 0 chr2 72415927 72416047 -180840536 + MIR3 SINE MIR 42 170 -38 28 86 0 0 chr2 72416796 72416866 -180839717 + AT_rich Low_complexity Low_complexity 1 70 0 263 305 132 37 chr2 72417100 72417425 -180839158 + L2 LINE L2 469 824 -2490 1368 230 140 37 chr2 72418048 72418847 -180837736 - L2 LINE L2 -3 3310 2412 500 325 97 16 chr2 72419016 72419397 -180837186 + L2 LINE L2 1749 2160 -1154 653 234 168 35 chr2 72419440 72419780 -180836803 + Charlie2 DNA MER1_type 68 513 -2349 1869 131 28 21 chr2 72419780 72420071 -180836512 + AluSx SINE Alu 1 293 -19 550 191 76 64 chr2 72420090 72420247 -180836336 + MLT1H LTR MaLR 384 549 0 198 323 6 54 chr2 72420310 72420477 -180836106 + L2 LINE L2 2360 2518 -796 5779 101 42 27 chr2 72420479 72421591 -180834992 + pTR5 LTR ERV1 741 2028 -410 348 227 37 56 chr2 72421592 72421699 -180834884 + LTR30 LTR ERV1 375 642 -80 1675 79 0 0 chr2 72421699 72421913 -180834670 + pTR5 LTR ERV1 181 394 -2044 714 152 40 8 chr2 72422119 72422244 -180834339 + FLAM_C SINE Alu 1 129 -4 248 244 0 12 chr2 72422602 72422688 -180833895 + GA-rich Low_complexity Low_complexity 4 88 0 585 298 86 7 chr2 72422701 72423031 -180833552 + L1MC4a LINE L1 5526 5801 -320 228 237 145 13 chr2 72424063 72424139 -180832444 - MIR3 SINE MIR -1 207 122 201 295 151 40 chr2 72424395 72424765 -180831818 + L2 LINE L2 1236 1646 -1668 43 35 0 0 chr2 72424814 72424871 -180831712 + AT_rich Low_complexity Low_complexity 1 57 0 235 269 46 9 chr2 72424891 72424999 -180831584 + L2 LINE L2 1814 1925 -1389 37 0 0 0 chr2 72425055 72425092 -180831491 + AT_rich Low_complexity Low_complexity 1 37 0 1912 149 0 14 chr2 72425092 72425387 -180831196 - AluJb SINE Alu -21 291 1 581 318 125 42 chr2 72425482 72425590 -180830993 - L2 LINE L2 0 3313 3215 2419 92 0 3 chr2 72425590 72425896 -180830687 + AluSx SINE Alu 1 305 -7 581 318 125 42 chr2 72425896 72426280 -180830303 - L2 LINE L2 -98 3215 2761 868 137 0 0 chr2 72426748 72426865 -180829718 + FLAM_C SINE Alu 1 117 -26 304 261 87 26 chr2 72426966 72427081 -180829502 - MIR3 SINE MIR -1 207 86 326 310 116 30 chr2 72429077 72429309 -180827274 - MIR SINE MIR -2 260 9 1806 151 43 0 chr2 72430296 72430575 -180826008 + AluJb SINE Alu 5 295 -17 22 56 0 0 chr2 72430590 72430626 -180825957 + AT_rich Low_complexity Low_complexity 1 36 0 990 181 16 36 chr2 72430887 72431080 -180825503 + MER20 DNA MER1_type 19 207 -12 182 212 0 0 chr2 72431141 72431174 -180825409 + MIR SINE MIR 74 106 -102 2204 80 9 64 chr2 72431212 72431346 -180825237 + AluY SINE Alu 2 142 -169 2502 77 0 0 chr2 72431346 72431656 -180824927 + AluY SINE Alu 1 310 -1 2204 80 9 64 chr2 72431656 72431847 -180824736 + AluY SINE Alu 142 309 -2 831 205 40 49 chr2 72431858 72431916 -180824667 + MLT1A1 LTR MaLR 144 201 -164 2403 91 0 0 chr2 72431916 72432212 -180824371 + AluSc SINE Alu 2 297 -12 831 205 40 49 chr2 72432212 72432377 -180824206 + MLT1A1 LTR MaLR 201 365 0 2187 119 7 0 chr2 72432482 72432767 -180823816 + AluSx SINE Alu 1 287 -25 278 324 6 18 chr2 72432846 72433012 -180823571 + MIR SINE MIR 32 192 -70 284 176 0 59 chr2 72433518 72433603 -180822980 + Charlie7 DNA MER1_type 37 116 -2496 4657 157 57 9 chr2 72433609 72434531 -180822052 + L1MB3 LINE L1 5192 6152 -31 308 204 62 80 chr2 72434533 72434646 -180821937 + Charlie7 DNA MER1_type 89 199 -2413 1333 216 113 19 chr2 72434673 72435044 -180821539 + Charlie7 DNA MER1_type 287 692 -1920 793 155 109 26 chr2 72435151 72435283 -180821300 + MER3 DNA MER1_type 1 155 -54 2396 106 0 0 chr2 72435283 72435594 -180820989 - AluSx SINE Alu -1 311 1 793 155 109 26 chr2 72435594 72435654 -180820929 + MER3 DNA MER1_type 155 209 0 440 300 119 65 chr2 72435715 72436052 -180820531 + L2 LINE L2 2918 3272 0 221 313 60 12 chr2 72437471 72437554 -180819029 + L2 LINE L2 3158 3244 -28 360 0 0 0 chr2 72438609 72438649 -180817934 + (CA)n Simple_repeat Simple_repeat 2 41 0 243 0 0 0 chr2 72438648 72438675 -180817908 + (TC)n Simple_repeat Simple_repeat 1 27 0 * 180 279 209 0 chr2 72438716 72438799 -180817784 - MIR SINE MIR 0 262 162 384 214 303 0 chr2 72438799 72438944 -180817639 - MER5A DNA MER1_type 0 189 1 377 252 39 31 chr2 72438950 72439077 -180817506 - MIR SINE MIR -134 128 1 343 205 36 12 chr2 72439522 72439605 -180816978 + L2 LINE L2 3188 3272 0 24 0 0 0 chr2 72441223 72441247 -180815336 + AT_rich Low_complexity Low_complexity 1 24 0 216 0 0 0 chr2 72441680 72441704 -180814879 + (T)n Simple_repeat Simple_repeat 1 24 0 22 56 0 0 chr2 72442336 72442372 -180814211 + GC_rich Low_complexity Low_complexity 1 36 0 220 220 0 0 chr2 72442603 72442653 -180813930 + A-rich Low_complexity Low_complexity 1 50 0 2170 111 13 0 chr2 72442657 72442955 -180813628 - AluSx SINE Alu -8 304 3 616 204 53 0 chr2 72443013 72443145 -180813438 - MER5A DNA MER1_type 0 189 51 197 271 156 16 chr2 72443277 72443399 -180813184 + MIR SINE MIR 117 255 -7 30 21 0 21 chr2 72443624 72443643 -180812940 + AT_rich Low_complexity Low_complexity 1 19 -28 826 145 0 0 chr2 72443643 72443760 -180812823 + FLAM_C SINE Alu 2 118 -15 30 21 0 21 chr2 72443760 72443788 -180812795 + AT_rich Low_complexity Low_complexity 19 47 0 2000 126 3 3 chr2 72443790 72444129 -180812454 + AluSx SINE Alu 1 339 0 23 0 0 0 chr2 72444131 72444154 -180812429 + AT_rich Low_complexity Low_complexity 1 23 0 3940 175 37 20 chr2 72444182 72444919 -180811664 - MER49 LTR ERV1 0 923 175 835 221 47 9 chr2 72445481 72445694 -180810889 + MIR SINE MIR 1 221 -41 249 33 0 0 chr2 72446495 72446525 -180810058 + (CA)n Simple_repeat Simple_repeat 2 31 0 180 0 0 0 chr2 72446531 72446551 -180810032 + (TC)n Simple_repeat Simple_repeat 1 20 0 180 279 209 0 chr2 72446592 72446675 -180809908 - MIR SINE MIR 0 262 162 416 200 303 0 chr2 72446675 72446820 -180809763 - MER5A DNA MER1_type 0 189 1 377 252 39 31 chr2 72446826 72446953 -180809630 - MIR SINE MIR -134 128 1 343 205 36 12 chr2 72447396 72447479 -180809104 + L2 LINE L2 3188 3272 0 24 0 0 0 chr2 72449096 72449120 -180807463 + AT_rich Low_complexity Low_complexity 1 24 0 216 0 0 0 chr2 72449553 72449577 -180807006 + (T)n Simple_repeat Simple_repeat 1 24 0 2431 87 7 3 chr2 72449700 72450010 -180806573 - AluSp SINE Alu -2 311 1 432 259 201 0 chr2 72450103 72450327 -180806256 - L1ME4a LINE L1 -56 6065 5797 2011 137 3 31 chr2 72450424 72450745 -180805838 - AluJb SINE Alu 0 312 1 2337 116 0 0 chr2 72450748 72451059 -180805524 - AluSx SINE Alu -1 311 1 314 263 76 17 chr2 72451062 72451180 -180805403 - L1ME4a LINE L1 -456 5665 5541 260 278 134 0 chr2 72451188 72451285 -180805298 - L2 LINE L2 -4 3309 3200 1398 173 92 11 chr2 72451292 72451576 -180805007 - AluJo SINE Alu -5 307 1 329 345 42 0 chr2 72451743 72451862 -180804721 - L2 LINE L2 0 3272 3149 776 220 0 0 chr2 72452045 72452186 -180804397 + FRAM SINE Alu 1 138 -38 2298 65 4 0 chr2 72452321 72452624 -180803959 - AluY SINE Alu 0 304 1 824 149 26 108 chr2 72452624 72452819 -180803764 - AluSg/x SINE Alu -14 296 118 1926 140 27 3 chr2 72452836 72453128 -180803455 - AluSx SINE Alu -13 299 1 2022 144 0 0 chr2 72453399 72453698 -180802885 + AluSx SINE Alu 1 299 -13 362 236 22 11 chr2 72454039 72454128 -180802455 + MER5C DNA MER1_type 5 94 -230 420 233 43 0 chr2 72454150 72454266 -180802317 + MER94 DNA DNA 11 131 -3 7227 78 0 0 chr2 72454597 72455532 -180801051 - L1PA7 LINE L1 -1484 4662 3728 7169 55 6 0 chr2 72455533 72457002 -180799581 + L1PA7 LINE L1 4675 6148 -6 270 179 48 12 chr2 72457002 72457064 -180799519 - L1MC4 LINE L1 -1340 6702 6635 1095 139 0 0 chr2 72457064 72457244 -180799339 + (TA)n Simple_repeat Simple_repeat 1 180 0 270 179 48 12 chr2 72457244 72457265 -180799318 - L1MC4 LINE L1 -1407 6635 6616 2048 136 10 0 chr2 72457374 72457669 -180798914 - AluSx SINE Alu -11 301 4 2203 109 7 3 chr2 72457821 72458115 -180798468 - AluSg SINE Alu -14 296 2 4189 207 107 50 chr2 72458125 72458938 -180797645 - Charlie2a DNA MER1_type -41 2821 2056 2090 136 0 7 chr2 72458938 72459240 -180797343 + AluSx SINE Alu 1 300 -12 4189 207 107 50 chr2 72459240 72459518 -180797065 - Charlie2a DNA MER1_type -806 2056 1795 2100 82 24 10 chr2 72459518 72459811 -180796772 - AluSg SINE Alu -13 297 1 4189 207 107 50 chr2 72459811 72460247 -180796336 - Charlie2a DNA MER1_type -1067 1795 1205 639 177 0 16 chr2 72460247 72460371 -180796212 - FRAM SINE Alu -3 173 52 329 179 64 13 chr2 72460375 72460453 -180796130 - Charlie2a DNA MER1_type -1660 1202 1121 685 157 0 0 chr2 72460454 72460562 -180796021 + FLAM_C SINE Alu 1 108 -35 954 266 80 102 chr2 72460562 72462156 -180794427 + L1MEd LINE L1 99 1747 -743 803 175 0 0 chr2 72462182 72462308 -180794275 + FLAM_C SINE Alu 6 131 -12 478 174 0 0 chr2 72462321 72462390 -180794193 + AluJ/FRAM SINE Alu 218 286 -26 1215 250 86 13 chr2 72462396 72462780 -180793803 + HAL1 LINE L1 101 512 -1995 2024 251 77 21 chr2 72462780 72463299 -180793284 - MLT1H1 LTR MaLR 0 555 8 654 260 110 48 chr2 72463324 72463616 -180792967 + HAL1 LINE L1 517 826 -1681 713 128 84 128 chr2 72463616 72463795 -180792788 + MER53 DNA DNA 1 171 -18 2488 73 0 6 chr2 72463796 72464109 -180792474 - AluY SINE Alu 0 311 1 306 0 0 0 chr2 72464109 72464143 -180792440 + (T)n Simple_repeat Simple_repeat 1 34 0 2187 228 139 26 chr2 72464154 72464329 -180792254 + HAL1 LINE L1 819 973 -1534 978 192 30 0 chr2 72464329 72464496 -180792087 + FAM SINE Alu 1 172 -3 2187 228 139 26 chr2 72464496 72465149 -180791434 + HAL1 LINE L1 973 1740 -767 360 181 9 105 chr2 72465269 72465374 -180791209 - MIR SINE MIR -8 254 160 608 256 86 115 chr2 72465459 72465636 -180790947 + MLT1G1 LTR MaLR 1 182 -373 2221 132 0 0 chr2 72465636 72465940 -180790643 + AluSx SINE Alu 1 304 -8 608 256 86 115 chr2 72465940 72466301 -180790282 + MLT1G1 LTR MaLR 182 505 -50 4925 155 45 16 chr2 72466530 72466738 -180789845 + L1MB8 LINE L1 5111 5312 -866 1838 127 0 4 chr2 72466738 72466998 -180789585 + AluSg SINE Alu 1 259 -51 4925 155 45 16 chr2 72466998 72467579 -180789004 + L1MB8 LINE L1 5312 5945 -233 2056 142 0 0 chr2 72467579 72467924 -180788659 + AluSx SINE Alu 1 345 0 4925 155 45 16 chr2 72467924 72468165 -180788418 + L1MB8 LINE L1 5945 6178 0 654 157 10 0 chr2 72468174 72468276 -180788307 + U13 snRNA snRNA 1 103 -1 261 295 108 49 chr2 72468582 72468870 -180787713 - MLT1H LTR MaLR -111 438 134 944 83 8 8 chr2 72469150 72469271 -180787312 + FLAM_C SINE Alu 6 126 -17 244 295 0 0 chr2 72469348 72469426 -180787157 + (TA)n Simple_repeat Simple_repeat 1 78 0 22 0 0 0 chr2 72469701 72469723 -180786860 + AT_rich Low_complexity Low_complexity 1 22 0 2299 81 0 29 chr2 72469753 72470060 -180786523 - AluSx SINE Alu -14 298 1 1328 26 13 0 chr2 72470200 72470354 -180786229 + L1PA4 LINE L1 6000 6155 0 1070 253 73 21 chr2 72470355 72470644 -180785939 - MLT1A1 LTR MaLR -61 304 1 849 199 33 0 chr2 72470788 72470939 -180785644 + MER45A DNA AcHobo 7 162 -16 432 228 110 22 chr2 72471556 72471692 -180784891 - MER103 DNA DNA -1 165 18 221 317 0 0 chr2 72471946 72472006 -180784577 + L2 LINE L2 3213 3272 0 200 283 100 0 chr2 72472017 72472077 -180784506 + MIR3 SINE MIR 112 177 -31 253 336 29 29 chr2 72472234 72472338 -180784245 - L2 LINE L2 -234 3038 2935 2394 91 3 0 chr2 72472539 72472848 -180783735 + AluSx SINE Alu 3 312 0 366 107 0 0 chr2 72473110 72473166 -180783417 + (TG)n Simple_repeat Simple_repeat 1 56 0 2128 116 31 0 chr2 72473307 72473600 -180782983 + AluSx SINE Alu 1 302 -10 2350 109 0 0 chr2 72474183 72474495 -180782088 + AluSx SINE Alu 1 312 0 2912 240 104 70 chr2 72474605 72475334 -180781249 + L1MC5 LINE L1 5768 6471 -1490 1878 181 13 0 chr2 72475334 72475638 -180780945 + AluJo SINE Alu 1 308 -4 2912 240 104 70 chr2 72475638 72476927 -180779656 + L1MC5 LINE L1 6471 7842 -119 375 153 0 0 chr2 72476929 72476988 -180779595 + AluS SINE Alu 2 60 -248 600 266 127 90 chr2 72477015 72477201 -180779382 - L3 LINE CR1 -17 1560 1382 1870 151 3 17 chr2 72477201 72477500 -180779083 - AluSx SINE Alu -17 295 1 600 266 127 90 chr2 72477500 72477855 -180778728 - L3 LINE CR1 -195 1382 999 1589 188 8 106 chr2 72477887 72477967 -180778616 - MER63B DNA MER1_type -656 404 318 1710 168 3 14 chr2 72477967 72478252 -180778331 + AluJo SINE Alu 2 283 -29 2025 101 48 0 chr2 72478252 72478550 -180778033 + AluSg SINE Alu 1 311 0 1589 188 8 106 chr2 72478550 72478923 -180777660 - MER63B DNA MER1_type -740 320 1 1264 332 155 29 chr2 72478924 72479776 -180776807 - L3 LINE CR1 -583 994 36 1349 158 13 22 chr2 72480006 72480234 -180776349 - AluJb SINE Alu 0 312 87 223 344 21 43 chr2 72480830 72480923 -180775660 + MIR SINE MIR 21 111 -97 234 150 0 0 chr2 72481106 72481146 -180775437 + (GGA)n Simple_repeat Simple_repeat 3 42 0 272 274 44 9 chr2 72481753 72481866 -180774717 - L1ME4a LINE L1 -15 6106 5990 12686 160 14 38 chr2 72482381 72482568 -180774015 + L1 LINE L1 2911 3101 -3045 1586 183 0 48 chr2 72482568 72482880 -180773703 + AluJo SINE Alu 1 297 -15 12686 160 14 38 chr2 72482880 72483089 -180773494 + L1 LINE L1 3101 3314 -2832 413 123 0 0 chr2 72483089 72483146 -180773437 + AluS SINE Alu 2 58 -260 1525 135 0 0 chr2 72483146 72483353 -180773230 + AluSg/x SINE Alu 90 296 -14 12686 160 14 38 chr2 72483353 72485392 -180771191 + L1 LINE L1 3312 5343 -803 1129 169 5 11 chr2 72485392 72485576 -180771007 + AluJb SINE Alu 111 293 -19 26 0 0 0 chr2 72485577 72485603 -180770980 + AT_rich Low_complexity Low_complexity 1 26 0 2090 140 0 9 chr2 72486023 72486338 -180770245 + AluJb SINE Alu 1 312 0 610 240 69 46 chr2 72486340 72486557 -180770026 + L1ME LINE L1 5540 5761 -360 775 125 2 11 chr2 72486568 72486774 -180769809 - Tigger1 DNA MER2_type 0 2418 2249 1366 168 86 26 chr2 72486776 72487100 -180769483 - MER39 LTR ERV1 -313 394 1 243 291 0 35 chr2 72487100 72487186 -180769397 + L1ME LINE L1 5745 5827 -294 2146 114 3 0 chr2 72487190 72487479 -180769104 + AluSx SINE Alu 1 290 -22 249 101 145 29 chr2 72487622 72487652 -180768931 - MER46B DNA MER2_type -2669 62 142 1378 161 59 49 chr2 72487652 72487938 -180768645 + AluJo SINE Alu 4 292 -20 249 101 145 29 chr2 72487938 72487976 -180768607 - MER46B DNA MER2_type -2588 143 111 241 275 14 14 chr2 72488072 72488141 -180768442 + Charlie4 DNA MER1_type 1893 1961 0 1009 196 11 0 chr2 72488613 72488792 -180767791 - AluSg/x SINE Alu -11 301 121 212 227 0 80 chr2 72489531 72489543 -180767040 + MER5A DNA MER1_type 7 12 -177 282 203 16 31 chr2 72489543 72489607 -180766976 - MER5A DNA MER1_type -3 186 124 2322 113 0 0 chr2 72489665 72489974 -180766609 - AluSx SINE Alu -3 309 1 222 37 0 0 chr2 72490144 72490171 -180766412 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2197 96 0 0 chr2 72490173 72490453 -180766130 - AluSg SINE Alu -30 280 1 1956 82 4 0 chr2 72490614 72490858 -180765725 + AluSp SINE Alu 57 301 -12 263 264 19 0 chr2 72491016 72491069 -180765514 - MIR SINE MIR -159 103 50 1888 142 10 35 chr2 72491403 72491714 -180764869 + AluJb SINE Alu 1 303 -9 728 226 58 24 chr2 72492334 72492546 -180764037 + MER87 LTR ERV1 1 212 -329 2142 86 0 4 chr2 72492676 72492944 -180763639 - AluSc SINE Alu -42 267 1 21 36 0 0 chr2 72492952 72492980 -180763603 + AT_rich Low_complexity Low_complexity 1 28 0 184 281 37 73 chr2 72493148 72493230 -180763353 + MIR SINE MIR 43 121 -141 956 167 154 47 chr2 72493461 72493511 -180763072 - L1MB3 LINE L1 0 6183 6140 231 36 0 0 chr2 72493511 72493539 -180763044 + (TTA)n Simple_repeat Simple_repeat 2 29 0 2011 68 64 0 chr2 72493539 72493789 -180762794 - AluY SINE Alu -19 292 27 956 167 154 47 chr2 72493789 72493970 -180762613 - L1MB3 LINE L1 -42 6141 5926 1112 103 0 0 chr2 72494247 72494392 -180762191 - FRAM SINE Alu -10 166 22 201 328 123 18 chr2 72494560 72494731 -180761852 + MIR SINE MIR 4 192 -70 1359 163 5 0 chr2 72495031 72495252 -180761331 - AluJo SINE Alu -4 308 87 2060 136 3 7 chr2 72495911 72496220 -180760363 + AluSx SINE Alu 1 308 -4 2182 0 0 0 chr2 72496313 72496644 -180759939 + L1MB3 LINE L1 5265 5833 -350 2182 133 33 40 chr2 72496644 72497043 -180759540 + L1MB3 LINE L1 5788 6183 0 2156 110 0 29 chr2 72497049 72497357 -180759226 + AluSx SINE Alu 1 299 -13 2182 0 0 0 chr2 72497357 72497516 -180759067 + L1MB3 LINE L1 5841 6183 0 261 243 79 0 chr2 72497726 72497816 -180758767 - L1ME2 LINE L1 -223 5941 5860 829 114 9 0 chr2 72498221 72498335 -180758248 + AluJb SINE Alu 98 212 -100 219 69 0 0 chr2 72498336 72498365 -180758218 + (GA)n Simple_repeat Simple_repeat 2 30 0 853 158 0 0 chr2 72498591 72498718 -180757865 + AluSx SINE Alu 47 173 -139 2394 86 10 0 chr2 72499792 72500095 -180756488 - AluSq SINE Alu -7 306 1 369 296 99 5 chr2 72500143 72500356 -180756227 - L1ME2 LINE L1 -239 5882 5650 * 3724 190 64 29 chr2 72500355 72500858 -180755725 + L1ME1 LINE L1 5230 5780 -386 1701 140 0 0 chr2 72500858 72501093 -180755490 + AluSx SINE Alu 1 235 -77 3724 190 64 29 chr2 72501093 72501489 -180755094 + L1ME1 LINE L1 5780 6161 -5 2352 104 0 7 chr2 72502110 72502418 -180754165 + AluSc SINE Alu 1 306 -3 919 252 100 71 chr2 72502479 72502694 -180753889 + L1ME LINE L1 4739 4946 -1216 1923 164 0 6 chr2 72502694 72503005 -180753578 + AluJo SINE Alu 1 309 -3 919 252 100 71 chr2 72503005 72503391 -180753192 + L1ME LINE L1 4946 5319 -843 2050 131 0 21 chr2 72503391 72503681 -180752902 + AluSx SINE Alu 5 288 -24 919 252 100 71 chr2 72503681 72504099 -180752484 + L1ME LINE L1 5319 5790 -372 1982 149 0 0 chr2 72504176 72504484 -180752099 - AluSx SINE Alu 0 308 1 23 92 0 0 chr2 72504491 72504556 -180752027 + AT_rich Low_complexity Low_complexity 1 65 0 6292 58 17 7 chr2 72504853 72505622 -180750961 + L1PA7 LINE L1 5378 6154 0 369 0 0 0 chr2 72505641 72505682 -180750901 + (CA)n Simple_repeat Simple_repeat 2 42 0 959 18 0 0 chr2 72506271 72506383 -180750200 - L1PA4 LINE L1 -179 5976 5865 295 224 184 0 chr2 72506383 72506459 -180750124 + MLT1A1 LTR MaLR 276 365 0 827 156 7 0 chr2 72506508 72506643 -180749940 - AluJo SINE Alu -174 138 3 1537 119 5 9 chr2 72506663 72506881 -180749702 + AluJb SINE Alu 84 300 -12 14210 113 40 8 chr2 72507430 72509555 -180747028 - Tigger1 DNA MER2_type 0 2418 226 804 197 0 0 chr2 72509582 72509719 -180746864 + FLAM_C SINE Alu 1 137 -6 1879 167 21 12 chr2 72509719 72510049 -180746534 - MLT1A1 LTR MaLR -32 333 1 221 225 0 0 chr2 72510388 72510428 -180746155 - MIR SINE MIR -106 156 117 209 268 54 71 chr2 72510886 72510998 -180745585 - MIR3 SINE MIR -92 116 7 1592 164 43 16 chr2 72511077 72511404 -180745179 + AluJo SINE Alu 1 312 0 920 162 48 0 chr2 72511940 72512107 -180744476 + AluJo SINE Alu 120 294 -18 1264 82 0 0 chr2 72512472 72512630 -180743953 + L1MA2 LINE L1 6147 6304 0 23 0 0 0 chr2 72512630 72512653 -180743930 + AT_rich Low_complexity Low_complexity 1 23 0 304 268 177 30 chr2 72512704 72512868 -180743715 + L1ME3A LINE L1 5924 6111 -59 577 330 115 11 chr2 72512894 72513345 -180743238 + L1M4 LINE L1 3427 3924 -2222 * 1133 154 16 6 chr2 72513314 72513531 -180743052 + L1MB7 LINE L1 5747 5962 -208 1922 152 10 3 chr2 72513618 72513927 -180742656 + AluSx SINE Alu 1 311 -1 364 214 61 0 chr2 72513935 72514033 -180742550 + L1M4 LINE L1 3847 3950 -2196 43 0 0 0 chr2 72514191 72514234 -180742349 + AT_rich Low_complexity Low_complexity 1 43 0 2235 123 0 0 chr2 72514268 72514570 -180742013 - AluSx SINE Alu -10 302 1 323 211 79 35 chr2 72514789 72514903 -180741680 - L1ME4a LINE L1 -7 6114 5996 1564 167 3 38 chr2 72514903 72515196 -180741387 - AluJb SINE Alu -9 303 21 456 263 135 72 chr2 72515419 72515864 -180740719 + MLT1H LTR MaLR 73 545 -4 21 0 0 0 chr2 72516100 72516121 -180740462 + AT_rich Low_complexity Low_complexity 1 21 0 530 189 135 0 chr2 72516284 72516395 -180740188 + FLAM_A SINE Alu 3 128 -5 1417 155 62 7 chr2 72516685 72516975 -180739608 + L1MB7 LINE L1 5879 6184 0 254 253 12 24 chr2 72518461 72518544 -180738039 - MIR SINE MIR -169 93 12 640 172 26 17 chr2 72518813 72518929 -180737654 + MER63 DNA MER1_type 1 743 -319 253 290 14 0 chr2 72518974 72519043 -180737540 + MER63 DNA MER1_type 983 1052 -8 2273 116 7 0 chr2 72520614 72520924 -180735659 - AluSx SINE Alu 0 312 1 226 313 78 17 chr2 72521039 72521154 -180735429 - MIR SINE MIR -120 142 21 703 298 72 36 chr2 72521333 72521749 -180734834 + MLT1K LTR MaLR 158 588 0 418 281 118 17 chr2 72521853 72522141 -180734442 - L2 LINE L2 -408 2906 2590 204 282 0 35 chr2 72522181 72522266 -180734317 - L2 LINE L2 -939 2375 2294 584 266 0 4 chr2 72524091 72524319 -180732264 + (CA)n Simple_repeat Simple_repeat 1 226 0 1740 112 0 4 chr2 72524397 72524629 -180731954 - AluSg SINE Alu -16 294 64 234 0 0 0 chr2 72524678 72524704 -180731879 + (T)n Simple_repeat Simple_repeat 1 26 0 180 0 0 0 chr2 72524818 72524838 -180731745 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 209 290 0 16 chr2 72526766 72526828 -180729755 + MIR SINE MIR 15 75 -187 1735 165 3 31 chr2 72526858 72527211 -180729372 + AluJb SINE Alu 1 344 0 1087 139 10 21 chr2 72527211 72527405 -180729178 + AluJo SINE Alu 118 309 -3 659 171 47 16 chr2 72527512 72527641 -180728942 + FLAM_C SINE Alu 1 133 0 1027 223 15 0 chr2 72527857 72528063 -180728520 + LTR16A1 LTR ERVL 247 455 -2 22 0 0 0 chr2 72528064 72528086 -180728497 + AT_rich Low_complexity Low_complexity 1 22 0 1677 126 20 61 chr2 72528126 72528420 -180728163 + AluJo SINE Alu 1 282 -30 1212 248 99 26 chr2 72528426 72528849 -180727734 + HAL1 LINE L1 59 512 -1995 2086 243 77 21 chr2 72528849 72529368 -180727215 - MLT1H1 LTR MaLR 0 555 8 702 253 110 48 chr2 72529393 72529685 -180726898 + HAL1 LINE L1 517 826 -1681 733 124 5 156 chr2 72529685 72529903 -180726680 - MER53 DNA DNA 0 189 5 299 260 51 45 chr2 72529905 72530082 -180726501 + HAL1 LINE L1 823 1000 -1507 841 184 68 0 chr2 72530087 72530234 -180726349 + FAM SINE Alu 1 157 -28 598 240 6 6 chr2 72530259 72530442 -180726141 + HAL1 LINE L1 1032 1214 -1293 1616 227 43 50 chr2 72530448 72530747 -180725836 + HAL1 LINE L1 1259 1556 -951 1939 148 0 3 chr2 72530747 72531059 -180725524 + AluSx SINE Alu 1 311 0 1616 227 43 50 chr2 72531059 72531242 -180725341 + HAL1 LINE L1 1556 1739 -768 366 185 17 92 chr2 72531355 72531474 -180725109 - MIR SINE MIR -4 258 149 642 272 102 102 chr2 72531553 72532144 -180724439 + MLT1G1 LTR MaLR 5 595 0 2208 224 47 28 chr2 72532271 72532802 -180723781 - MER87 LTR ERV1 0 541 1 296 125 0 0 chr2 72533070 72533110 -180723473 - Alu SINE Alu -262 41 2 389 221 23 12 chr2 72533111 72533197 -180723386 - MER87 LTR ERV1 -73 468 382 483 303 46 59 chr2 72533531 72533854 -180722729 - L2 LINE L2 -368 2946 2628 280 286 20 51 chr2 72533891 72533989 -180722594 + MER5B DNA MER1_type 84 178 0 576 255 67 51 chr2 72534089 72534391 -180722192 + Charlie8 DNA MER1_type 22 323 -2094 221 288 45 45 chr2 72534485 72534596 -180721987 - L2 LINE L2 -516 2798 2688 1673 155 46 7 chr2 72534596 72534880 -180721703 + AluJo SINE Alu 1 295 -17 254 196 11 120 chr2 72535141 72535233 -180721350 + MIR SINE MIR 110 191 -71 227 333 35 0 chr2 72535297 72535384 -180721199 - L2 LINE L2 0 3272 3183 3038 166 15 4 chr2 72535435 72535971 -180720612 + L1MB4 LINE L1 5639 6180 0 418 186 39 115 chr2 72535971 72536061 -180720522 + L1M4 LINE L1 3034 3109 -3037 2272 85 7 7 chr2 72536061 72536193 -180720390 + AluSc SINE Alu 1 132 -177 180 0 0 0 chr2 72536193 72536213 -180720370 + (TA)n Simple_repeat Simple_repeat 2 21 0 2272 85 7 7 chr2 72536213 72536373 -180720210 + AluSc SINE Alu 131 293 -16 418 186 39 115 chr2 72536373 72536438 -180720145 + L1M4 LINE L1 3109 3177 -2969 201 348 71 9 chr2 72536628 72536740 -180719843 + L2 LINE L2 3153 3271 -1 771 153 0 44 chr2 72536887 72537024 -180719559 - FLAM_C SINE Alu -2 131 1 1324 96 0 0 chr2 72537144 72537321 -180719262 + AluSp SINE Alu 137 313 0 574 289 36 31 chr2 72537465 72537659 -180718924 + MER91A DNA MER1_type 2 196 0 242 206 10 49 chr2 72538469 72538571 -180718012 + (TA)n Simple_repeat Simple_repeat 2 99 0 193 75 50 0 chr2 72538575 72538615 -180717968 + (TTTA)n Simple_repeat Simple_repeat 1 42 0 519 212 18 1 chr2 72538667 72538814 -180717769 - L1ME2 LINE L1 -36 6134 5997 1854 106 97 56 chr2 72539210 72539570 -180717013 + THE1C LTR MaLR 1 375 0 2678 209 115 48 chr2 72539695 72540075 -180716508 - L1ME3A LINE L1 -5 6165 5812 1887 126 33 0 chr2 72540075 72540345 -180716238 - AluJo SINE Alu -33 279 1 2678 209 115 48 chr2 72540345 72540757 -180715826 - L1ME3A LINE L1 -358 5812 5320 1989 234 111 12 chr2 72540817 72541410 -180715173 - L1MC4a LINE L1 -2 7806 7155 1638 264 79 32 chr2 72541432 72542192 -180714391 - L1ME3A LINE L1 -869 5277 4473 2082 126 3 3 chr2 72542192 72542486 -180714097 - AluSx SINE Alu -18 294 1 1638 264 79 32 chr2 72542486 72542559 -180714024 - L1ME3A LINE L1 -1673 4473 4405 971 188 53 10 chr2 72542612 72542820 -180713763 + MER20 DNA MER1_type 1 217 -2 522 180 180 14 chr2 72543000 72543139 -180713444 + LTR40a LTR ERVL 1 162 -357 837 107 0 64 chr2 72543229 72543369 -180713214 + FLAM_C SINE Alu 1 131 -2 2189 126 0 0 chr2 72543391 72543676 -180712907 + AluSq SINE Alu 1 285 -28 701 276 0 12 chr2 72543725 72543888 -180712695 + LTR40a LTR ERVL 237 397 -122 496 68 0 0 chr2 72545140 72545213 -180711370 - Alu SINE Alu 0 311 239 980 176 151 0 chr2 72545321 72545520 -180711063 - LTR48B LTR ERV1 -415 229 1 679 245 83 37 chr2 72545528 72545754 -180710829 + L1MC4a LINE L1 5698 5945 -1863 2012 117 11 3 chr2 72545754 72546037 -180710546 + AluSx SINE Alu 16 300 -12 679 245 83 37 chr2 72546037 72546136 -180710447 + L1MC4a LINE L1 5945 6038 -1770 1797 193 0 3 chr2 72546504 72546810 -180709773 - AluJo SINE Alu -7 305 1 652 291 62 21 chr2 72547072 72547313 -180709270 - MIR SINE MIR -2 260 10 1693 154 70 7 chr2 72547340 72547625 -180708958 + AluSx SINE Alu 1 303 -9 222 254 22 122 chr2 72548121 72548302 -180708281 - L2 LINE L2 -188 3084 2922 246 284 135 28 chr2 72548712 72548853 -180707730 + L2 LINE L2 3116 3271 -1 222 241 0 35 chr2 72549030 72549088 -180707495 + L2 LINE L2 2929 2984 -329 252 308 108 8 chr2 72549448 72549568 -180707015 + MER5A DNA MER1_type 53 184 -5 377 247 157 45 chr2 72549630 72549853 -180706730 - MLT1L LTR MaLR -245 370 123 823 143 5 148 chr2 72550461 72550524 -180706059 - MER5A DNA MER1_type -4 185 115 712 183 15 8 chr2 72550524 72550655 -180705928 - FLAM_A SINE Alu -1 132 1 823 143 5 148 chr2 72550655 72550801 -180705782 - MER5A DNA MER1_type -74 115 6 1995 140 18 58 chr2 72551101 72551434 -180705149 + L1MB4 LINE L1 5804 6120 -60 1884 139 32 0 chr2 72551434 72551714 -180704869 + AluJb SINE Alu 1 289 -23 1995 140 18 58 chr2 72551714 72551773 -180704810 + L1MB4 LINE L1 6120 6180 0 1662 206 34 56 chr2 72551804 72552250 -180704333 - MER63B DNA MER1_type 0 436 1 188 190 52 52 chr2 72552445 72552503 -180704080 + MIR SINE MIR 96 153 -55 409 129 0 29 chr2 72552581 72552651 -180703932 + HY3 scRNA scRNA 33 100 -1 27 0 0 0 chr2 72552863 72552890 -180703693 + AT_rich Low_complexity Low_complexity 1 27 0 26 0 0 0 chr2 72553005 72553031 -180703552 + AT_rich Low_complexity Low_complexity 1 26 0 2120 122 3 7 chr2 72553031 72553325 -180703258 - AluSx SINE Alu -19 293 1 288 0 0 0 chr2 72553335 72553367 -180703216 + (TA)n Simple_repeat Simple_repeat 1 32 0 281 186 197 96 chr2 72553583 72553669 -180702914 - L1ME LINE L1 -469 5652 5576 2238 102 3 13 chr2 72553669 72553972 -180702611 + AluSc SINE Alu 1 300 -9 281 186 197 96 chr2 72553972 72554073 -180702510 - L1ME LINE L1 -545 5576 5446 1528 152 0 0 chr2 72554081 72554305 -180702278 - AluSx SINE Alu -88 224 1 1789 169 0 23 chr2 72554327 72554629 -180701954 + AluJo SINE Alu 1 295 -17 21 36 0 0 chr2 72554670 72554698 -180701885 + AT_rich Low_complexity Low_complexity 1 28 0 2002 131 20 10 chr2 72554843 72555141 -180701442 + AluSx SINE Alu 1 301 -11 235 183 33 17 chr2 72555421 72555481 -180701102 + MIR3 SINE MIR 137 197 -11 34 42 0 0 chr2 72555764 72555812 -180700771 + AT_rich Low_complexity Low_complexity 1 48 0 2526 63 0 0 chr2 72555823 72556124 -180700459 - AluY SINE Alu -10 301 1 282 242 16 0 chr2 72556749 72556811 -180699772 + MIR SINE MIR 196 258 -4 716 177 31 8 chr2 72556877 72556993 -180699590 + AluJo SINE Alu 2 123 -189 234 0 0 0 chr2 72556993 72557019 -180699564 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 716 177 31 8 chr2 72557019 72557032 -180699551 + AluJo SINE Alu 123 134 -178 2215 180 42 8 chr2 72557032 72557537 -180699046 - Charlie5 DNA MER1_type -8 2604 2083 1733 184 120 42 chr2 72557534 72557632 -180698951 - Charlie5 DNA MER1_type -2022 602 513 * 865 97 0 0 chr2 72557632 72557746 -180698837 + FLAM_C SINE Alu 2 115 -18 1733 184 120 42 chr2 72557746 72558197 -180698386 - Charlie5 DNA MER1_type -2111 513 10 916 183 6 0 chr2 72558233 72558397 -180698186 + AluJo SINE Alu 137 301 -1 24 67 0 0 chr2 72558569 72558614 -180697969 + AT_rich Low_complexity Low_complexity 1 45 0 231 161 0 0 chr2 72558841 72558897 -180697686 + (CA)n Simple_repeat Simple_repeat 2 57 0 23 0 0 0 chr2 72559607 72559630 -180696953 + AT_rich Low_complexity Low_complexity 1 23 0 2475 81 0 0 chr2 72559655 72559953 -180696630 - AluSg SINE Alu -12 298 1 4041 134 24 40 chr2 72560669 72561068 -180695515 - L1MB3 LINE L1 -7 6176 5793 216 0 0 0 chr2 72561068 72561092 -180695491 + (CA)n Simple_repeat Simple_repeat 2 25 0 4041 134 24 40 chr2 72561092 72561432 -180695151 - L1MB3 LINE L1 -390 5793 5449 780 205 91 103 chr2 72561435 72561698 -180694885 - L1ME2 LINE L1 -57 6107 5848 207 255 0 0 chr2 72561926 72561977 -180694606 - L2 LINE L2 -1 3271 3221 585 264 77 29 chr2 72562294 72562540 -180694043 - MIR SINE MIR 0 262 5 243 240 67 0 chr2 72562818 72562893 -180693690 + MIR3 SINE MIR 115 194 -14 234 184 28 28 chr2 72563916 72564025 -180692558 + (TA)n Simple_repeat Simple_repeat 1 109 0 190 298 106 19 chr2 72564050 72564154 -180692429 + MIR SINE MIR 2 114 -148 189 261 0 0 chr2 72564589 72564635 -180691948 + L2 LINE L2 3223 3268 -4 801 157 0 22 chr2 72564786 72564920 -180691663 + FLAM_C SINE Alu 1 131 -2 2337 88 3 0 chr2 72565659 72565955 -180690628 - AluSx SINE Alu -15 297 1 225 211 0 0 chr2 72566711 72566768 -180689815 + (CA)n Simple_repeat Simple_repeat 2 58 0 1942 152 3 16 chr2 72566801 72567116 -180689467 + AluJo SINE Alu 2 312 0 188 133 0 0 chr2 72568166 72568196 -180688387 - MIR SINE MIR -120 142 113 191 204 0 0 chr2 72568577 72568621 -180687962 - MIR SINE MIR -8 254 211 2417 88 7 0 chr2 72568729 72569036 -180687547 + AluSc SINE Alu 1 309 0 2484 84 0 0 chr2 72569572 72569922 -180686661 - AluSg SINE Alu 0 350 1 1351 109 52 0 chr2 72569922 72570115 -180686468 - AluSq SINE Alu -110 203 1 4588 203 67 37 chr2 72570115 72570333 -180686250 - MER21B-int LTR ERV1 -3001 1190 980 2432 84 0 3 chr2 72570333 72570632 -180685951 - AluSq SINE Alu -15 298 1 4588 203 67 37 chr2 72570632 72571451 -180685132 - MER21B-int LTR ERV1 -3211 980 122 314 219 73 0 chr2 72571681 72571763 -180684820 - LTR43 LTR ERV1 -326 276 189 2094 123 0 7 chr2 72571939 72572268 -180684315 - AluSx SINE Alu 0 327 1 800 131 25 0 chr2 72572311 72572433 -180684150 - MER21B-int LTR ERV1 -4066 125 1 446 175 117 58 chr2 72572515 72572635 -180683948 - MER21B LTR ERV1 -78 785 659 738 51 31 0 chr2 72572635 72572733 -180683850 + MER30 DNA MER1_type 1 101 -129 814 106 9 9 chr2 72572841 72572954 -180683629 + MER30 DNA MER1_type 118 230 0 2272 202 42 52 chr2 72572954 72573527 -180683056 - MER21B LTR ERV1 -197 666 100 300 254 42 0 chr2 72573593 72573664 -180682919 - MER21B LTR ERV1 -775 88 15 556 306 97 0 chr2 72573704 72573910 -180682673 + L2 LINE L2 2836 3061 -252 1414 213 96 10 chr2 72573958 72574272 -180682311 - MER58B DNA MER1_type 0 341 1 21 0 0 0 chr2 72574392 72574413 -180682170 + AT_rich Low_complexity Low_complexity 1 21 0 2603 68 3 0 chr2 72574584 72574894 -180681689 + AluSp SINE Alu 1 311 -2 2181 129 0 31 chr2 72574906 72575224 -180681359 + AluSx SINE Alu 1 308 -4 26 0 0 0 chr2 72575359 72575385 -180681198 + AT_rich Low_complexity Low_complexity 1 26 0 208 276 110 55 chr2 72575393 72575520 -180681063 + L2 LINE L2 3180 3313 0 350 189 178 77 chr2 72576184 72576281 -180680302 - MER5A DNA MER1_type 0 189 103 2209 128 0 3 chr2 72576281 72576586 -180679997 - AluSx SINE Alu -8 304 1 350 189 178 77 chr2 72576586 72576657 -180679926 - MER5A DNA MER1_type -86 103 4 1092 127 0 0 chr2 72576695 72576852 -180679731 + FRAM SINE Alu 10 166 -10 192 135 0 0 chr2 72577160 72577197 -180679386 + (CA)n Simple_repeat Simple_repeat 2 38 0 217 316 31 10 chr2 72578493 72578591 -180677992 - L3b LINE CR1 -188 1395 1296 916 114 0 8 chr2 72578613 72578745 -180677838 - FLAM_C SINE Alu -2 131 1 205 343 10 10 chr2 72578859 72578961 -180677622 - L3b LINE CR1 -319 1264 1163 2269 96 7 3 chr2 72579302 72579605 -180676978 - AluSg SINE Alu -6 304 1 1364 169 31 92 chr2 72579687 72580078 -180676505 - L1ME2 LINE L1 -9 6155 5789 2149 184 23 21 chr2 72580725 72581160 -180675423 - MLT1C LTR MaLR -30 437 2 261 0 0 0 chr2 72581642 72581671 -180674912 + (ATG)n Simple_repeat Simple_repeat 1 29 0 245 265 239 0 chr2 72581751 72581868 -180674715 - MIR SINE MIR -110 152 8 1324 276 110 41 chr2 72581892 72582675 -180673908 + L2 LINE L2 2004 2840 -474 21 36 0 0 chr2 72582679 72582707 -180673876 + AT_rich Low_complexity Low_complexity 1 28 0 1525 192 73 76 chr2 72582707 72582811 -180673772 - L1MC5 LINE L1 -34 7927 7824 2035 138 0 10 chr2 72582811 72583116 -180673467 - AluJb SINE Alu -10 302 1 1525 192 73 76 chr2 72583116 72583640 -180672943 - L1MC5 LINE L1 -137 7824 7301 671 306 167 23 chr2 72583691 72584086 -180672497 + L2 LINE L2 2856 3307 -6 2072 136 3 0 chr2 72584350 72584645 -180671938 + AluSx SINE Alu 1 296 -16 2662 43 0 3 chr2 72584647 72584950 -180671633 + AluY SINE Alu 1 302 -9 260 183 0 17 chr2 72584950 72585010 -180671573 + GA-rich Low_complexity Low_complexity 2 60 0 393 236 22 93 chr2 72585231 72585413 -180671170 - MIR SINE MIR -50 212 44 5266 120 14 10 chr2 72585549 72586325 -180670258 - LTR19C LTR ERV1 0 779 1 13074 168 36 37 chr2 72586329 72589063 -180667520 - HUERS-P3 LTR ERV1 -1 6995 4260 2322 96 0 0 chr2 72589063 72589354 -180667229 + AluSc SINE Alu 1 291 -18 13074 168 36 37 chr2 72589354 72590585 -180665998 - HUERS-P3 LTR ERV1 -2736 4260 3029 705 24 0 0 chr2 72590585 72590668 -180665915 + (TTATG)n Simple_repeat Simple_repeat 2 84 0 1705 68 0 10 chr2 72590668 72590873 -180665710 - AluY SINE Alu -26 285 83 13074 168 36 37 chr2 72590873 72592556 -180664027 - HUERS-P3 LTR ERV1 -3965 3031 2637 7974 230 20 22 chr2 72592546 72594891 -180661692 - HUERS-P3 LTR ERV1 -4635 2361 33 * 5232 118 14 14 chr2 72594923 72595702 -180660881 - LTR19C LTR ERV1 0 779 1 323 286 159 22 chr2 72595995 72596177 -180660406 - MIR SINE MIR 0 262 56 223 347 42 58 chr2 72596640 72596830 -180659753 - L2 LINE L2 -161 3111 2925 1346 220 49 133 chr2 72596867 72597488 -180659095 - LTR9 LTR ERV1 0 612 49 2130 137 3 7 chr2 72597488 72597795 -180658788 - AluSx SINE Alu -6 306 1 1346 220 49 133 chr2 72597795 72597841 -180658742 - LTR9 LTR ERV1 -563 49 1 2385 81 0 0 chr2 72598522 72598818 -180657765 + AluSc SINE Alu 1 296 -13 1957 118 43 16 chr2 72599006 72599310 -180657273 + AluSx SINE Alu 1 312 0 2346 105 0 0 chr2 72599947 72600251 -180656332 + AluSx SINE Alu 1 304 -8 335 315 137 10 chr2 72600279 72600476 -180656107 - MIR SINE MIR -6 256 35 2258 115 3 6 chr2 72600855 72601167 -180655416 + AluSx SINE Alu 1 311 -1 2372 99 0 7 chr2 72601413 72601716 -180654867 + AluSx SINE Alu 1 301 -11 1442 176 51 12 chr2 72601825 72602161 -180654422 - Charlie1 DNA MER1_type 0 2761 2413 3367 69 16 0 chr2 72602518 72602950 -180653633 + L1PA13 LINE L1 5717 6155 -8 526 261 77 92 chr2 72604430 72604596 -180651987 + L1ME4a LINE L1 5650 5817 -304 2076 142 0 13 chr2 72604596 72604907 -180651676 - AluJo SINE Alu -5 307 1 526 261 77 92 chr2 72604907 72605219 -180651364 + L1ME4a LINE L1 5817 6121 0 2001 141 0 3 chr2 72605432 72605723 -180650860 - AluJb SINE Alu -22 290 1 2103 119 0 35 chr2 72606022 72606334 -180650249 + AluSx SINE Alu 1 301 -11 225 318 80 11 chr2 72607505 72607681 -180648902 + L2 LINE L2 2227 2414 -900 736 138 103 0 chr2 72608067 72608212 -180648371 - FAM SINE Alu -8 41 1 790 223 15 86 chr2 72609142 72609195 -180647388 - MIR SINE MIR -1 261 206 2390 86 0 7 chr2 72609195 72609496 -180647087 - AluSq SINE Alu -14 299 1 790 223 15 86 chr2 72609496 72609684 -180646899 - MIR SINE MIR -56 206 6 189 0 0 0 chr2 72609684 72609705 -180646878 + (TC)n Simple_repeat Simple_repeat 2 22 0 2118 128 10 3 chr2 72609705 72610003 -180646580 - AluSx SINE Alu -12 300 1 790 223 15 86 chr2 72610003 72610028 -180646555 - MIR SINE MIR -225 37 12 380 192 95 121 chr2 72610138 72610280 -180646303 - MLT1G3 LTR MaLR -312 278 134 1997 147 3 13 chr2 72610280 72610594 -180645989 - AluJb SINE Alu -1 311 1 380 192 95 121 chr2 72610594 72610622 -180645961 - MLT1G3 LTR MaLR -456 134 107 711 213 152 97 chr2 72610622 72610689 -180645894 - MLT2B1 LTR ERVL 0 520 458 459 0 0 0 chr2 72610689 72610740 -180645843 + (TG)n Simple_repeat Simple_repeat 1 51 0 711 213 152 97 chr2 72610740 72611165 -180645418 - MLT2B1 LTR ERVL -62 458 1 380 192 95 121 chr2 72611165 72611182 -180645401 - MLT1G3 LTR MaLR -483 107 79 989 234 19 5 chr2 72611560 72611765 -180644818 + MER3 DNA MER1_type 1 208 -1 318 261 80 57 chr2 72613287 72613463 -180643120 - MIR SINE MIR -1 261 82 239 234 36 54 chr2 72613652 72613763 -180642820 - L1P LINE L1 -4290 1856 1748 815 239 67 34 chr2 72615429 72615668 -180640915 - MIR SINE MIR 0 262 16 2228 125 3 3 chr2 72615731 72616043 -180640540 + AluSx SINE Alu 1 312 0 1974 107 67 0 chr2 72617423 72617693 -180638890 - AluSx SINE Alu -20 292 5 2603 162 55 73 chr2 72617878 72618024 -180638559 + L1MB4 LINE L1 5483 5630 -550 1840 141 27 14 chr2 72618024 72618321 -180638262 + AluJb SINE Alu 1 301 -11 2603 162 55 73 chr2 72618321 72618884 -180637699 + L1MB4 LINE L1 5630 6179 -1 254 155 52 31 chr2 72618956 72619053 -180637530 + (TTATA)n Simple_repeat Simple_repeat 3 101 0 237 268 0 0 chr2 72619167 72619223 -180637360 + (TA)n Simple_repeat Simple_repeat 1 56 0 512 319 104 34 chr2 72619357 72619856 -180636727 + L1M4 LINE L1 2173 2706 -3440 1031 153 6 6 chr2 72619878 72620041 -180636542 + FRAM SINE Alu 1 163 -3 28 48 0 0 chr2 72620041 72620083 -180636500 + AT_rich Low_complexity Low_complexity 1 42 0 923 214 97 97 chr2 72620105 72620166 -180636417 + L1ME4a LINE L1 5548 5608 -513 2228 126 0 0 chr2 72620166 72620467 -180636116 + AluSx SINE Alu 1 301 -11 923 214 97 97 chr2 72620467 72620731 -180635852 + L1ME4a LINE L1 5608 5876 -245 2360 79 0 20 chr2 72620731 72621036 -180635547 + AluY SINE Alu 7 305 -6 923 214 97 97 chr2 72621036 72621278 -180635305 + L1ME4a LINE L1 5875 6116 -5 23 0 0 0 chr2 72622415 72622438 -180634145 + AT_rich Low_complexity Low_complexity 1 23 0 1964 94 37 27 chr2 72622448 72622745 -180633838 + AluSx SINE Alu 1 300 -12 242 189 129 121 chr2 72624268 72624400 -180632183 + L1ME2 LINE L1 5515 5647 -474 373 207 119 139 chr2 72624414 72624767 -180631816 + L1ME2 LINE L1 5685 6030 -134 1966 121 10 10 chr2 72626866 72627163 -180629420 - AluSx SINE Alu -15 297 1 784 156 25 0 chr2 72627378 72627500 -180629083 - FLAM_C SINE Alu -8 125 1 1733 160 13 36 chr2 72627533 72627840 -180628743 - AluJb SINE Alu -2 310 11 2219 118 3 0 chr2 72627881 72628178 -180628405 + AluSx SINE Alu 1 298 -14 234 312 101 0 chr2 72628211 72628320 -180628263 + MIR SINE MIR 117 236 -26 534 241 183 27 chr2 72628321 72628400 -180628183 - L1MEc LINE L1 -3710 2436 2371 195 42 0 0 chr2 72628400 72628424 -180628159 + (CATA)n Simple_repeat Simple_repeat 4 27 0 449 181 0 0 chr2 72628424 72628518 -180628065 - L1PB4 LINE L1 -5 6151 6058 534 241 183 27 chr2 72628518 72628699 -180627884 - L1MEc LINE L1 -3774 2372 2134 498 231 35 115 chr2 72628701 72628987 -180627596 - LTR41 LTR ERVL -1 772 510 378 191 0 0 chr2 72629058 72629126 -180627457 + MER58 DNA MER1_type 2352 2419 -1 2111 139 0 13 chr2 72629274 72629590 -180626993 + AluSx SINE Alu 1 312 0 1161 251 174 16 chr2 72630205 72630882 -180625701 - HAL1 LINE L1 -609 1898 1115 401 183 231 0 chr2 72630888 72630992 -180625591 + MER119 DNA MER1_type 456 583 0 401 183 231 0 chr2 72631697 72631801 -180624782 - MER119 DNA MER1_type 0 583 456 351 262 97 0 chr2 72631790 72631893 -180624690 - MER119 DNA MER1_type -436 147 35 * 232 241 69 0 chr2 72632512 72632570 -180624013 - MIR SINE MIR -82 180 119 30 0 0 0 chr2 72633013 72633043 -180623540 + AT_rich Low_complexity Low_complexity 1 30 0 1372 103 5 21 chr2 72634249 72634443 -180622140 + AluSg/x SINE Alu 118 308 -2 198 286 229 0 chr2 72634515 72634585 -180621998 - L2 LINE L2 -35 3278 3193 372 257 133 0 chr2 72634894 72634999 -180621584 + L2 LINE L2 3191 3309 -4 389 288 34 8 chr2 72636031 72636149 -180620434 - MIR3 SINE MIR -73 135 15 2293 57 4 11 chr2 72636225 72636505 -180620078 + AluY SINE Alu 21 298 -13 21 89 0 0 chr2 72637215 72637271 -180619312 + AT_rich Low_complexity Low_complexity 1 56 0 310 334 162 32 chr2 72637831 72638351 -180618232 - L2 LINE L2 -238 3034 2449 216 182 0 0 chr2 72639110 72639154 -180617429 + T-rich Low_complexity Low_complexity 1 44 0 1500 186 0 8 chr2 72639585 72639837 -180616746 + AluJb SINE Alu 1 250 -62 23 33 0 0 chr2 72640176 72640206 -180616377 + AT_rich Low_complexity Low_complexity 1 30 0 748 139 17 0 chr2 72640772 72640887 -180615696 + AluJb SINE Alu 158 274 -38 688 135 0 0 chr2 72641084 72641180 -180615403 + FLAM_C SINE Alu 22 117 -26 701 180 8 23 chr2 72641524 72641652 -180614931 - FLAM_A SINE Alu -7 126 1 191 364 23 15 chr2 72641689 72641821 -180614762 - L2 LINE L2 0 3313 3181 393 221 0 0 chr2 72642330 72642407 -180614176 - MER2 DNA MER2_type 0 345 269 1242 137 10 5 chr2 72642433 72642638 -180613945 - MER2 DNA MER2_type -138 207 2 1697 145 23 36 chr2 72642906 72643210 -180613373 - AluJb SINE Alu -12 300 1 249 225 113 0 chr2 72643733 72643813 -180612770 + L1ME LINE L1 5688 5776 -345 1479 158 0 4 chr2 72644503 72644737 -180611846 + AluJb SINE Alu 1 233 -79 577 281 140 0 chr2 72644791 72644969 -180611614 - MIR SINE MIR -7 255 53 24 67 0 0 chr2 72645096 72645141 -180611442 + AT_rich Low_complexity Low_complexity 1 45 0 1669 189 20 0 chr2 72645247 72645543 -180611040 - AluJb SINE Alu -10 302 1 26 0 0 0 chr2 72645891 72645917 -180610666 + AT_rich Low_complexity Low_complexity 1 26 0 318 263 53 11 chr2 72645947 72646042 -180610541 - MIR3 SINE MIR -17 191 93 545 210 210 23 chr2 72646762 72646938 -180609645 + MER63A DNA MER1_type 2 210 0 510 249 64 10 chr2 72646955 72647232 -180609351 - L1ME LINE L1 -700 5464 5175 938 162 0 50 chr2 72647233 72647412 -180609171 + AluJo SINE Alu 1 170 -142 1953 114 14 0 chr2 72647418 72647699 -180608884 + AluSq SINE Alu 11 295 -18 763 157 69 44 chr2 72647699 72647858 -180608725 + AluJb SINE Alu 134 296 -16 2116 113 3 7 chr2 72648623 72648914 -180607669 - AluSx SINE Alu -19 293 4 2191 114 0 10 chr2 72649882 72650181 -180606402 - AluSg1 SINE Alu -13 296 1 326 23 0 23 chr2 72650199 72650243 -180606340 + (TTA)n Simple_repeat Simple_repeat 2 44 0 992 158 0 0 chr2 72650246 72650392 -180606191 - FRAM SINE Alu -30 146 1 248 231 50 58 chr2 72651206 72651327 -180605256 - L1ME LINE L1 -254 5867 5748 21 0 0 0 chr2 72651464 72651485 -180605098 + AT_rich Low_complexity Low_complexity 1 21 0 252 0 0 0 chr2 72652719 72652747 -180603836 + (T)n Simple_repeat Simple_repeat 1 28 0 742 202 0 0 chr2 72654274 72654393 -180602190 - FLAM_C SINE Alu -24 119 1 2315 96 3 3 chr2 72654944 72655246 -180601337 + AluSc SINE Alu 1 302 -7 32 26 0 0 chr2 72655396 72655435 -180601148 + AT_rich Low_complexity Low_complexity 1 39 0 1070 152 8 37 chr2 72655580 72655837 -180600746 + AluJo SINE Alu 1 298 -14 1702 152 38 7 chr2 72656081 72656370 -180600213 - AluJb SINE Alu -14 298 1 31 44 0 0 chr2 72656476 72656521 -180600062 + AT_rich Low_complexity Low_complexity 1 45 0 2192 107 0 0 chr2 72656900 72657221 -180599362 - AluSx SINE Alu 0 321 1 23 0 0 0 chr2 72657321 72657344 -180599239 + AT_rich Low_complexity Low_complexity 1 23 0 432 129 0 16 chr2 72657879 72658116 -180598467 + AluSx SINE Alu 1 316 0 26 30 0 0 chr2 72658346 72658379 -180598204 + AT_rich Low_complexity Low_complexity 1 33 0 2369 85 3 0 chr2 72658556 72658850 -180597733 + AluSp SINE Alu 1 295 -18 1322 147 18 18 chr2 72659166 72659384 -180597199 + MER8 DNA MER2_type 22 239 0 239 300 0 0 chr2 72659560 72659620 -180596963 + L2 LINE L2 2688 2747 -567 199 312 78 0 chr2 72659957 72660034 -180596549 + L2 LINE L2 2924 3006 -307 26 64 0 0 chr2 72660150 72660197 -180596386 + AT_rich Low_complexity Low_complexity 1 47 0 211 161 32 32 chr2 72660242 72660304 -180596279 + (TTTA)n Simple_repeat Simple_repeat 3 64 0 198 0 0 0 chr2 72660669 72660691 -180595892 + (T)n Simple_repeat Simple_repeat 1 22 0 2240 113 0 0 chr2 72661444 72661737 -180594846 + AluSx SINE Alu 1 293 -19 880 214 0 0 chr2 72661844 72662012 -180594571 - AluJb SINE Alu -8 304 137 23 0 0 0 chr2 72662016 72662039 -180594544 + AT_rich Low_complexity Low_complexity 1 23 0 2155 135 3 0 chr2 72662047 72662343 -180594240 + AluSc SINE Alu 1 297 -12 24 0 0 0 chr2 72662508 72662532 -180594051 + AT_rich Low_complexity Low_complexity 1 24 0 1496 174 40 25 chr2 72662567 72662843 -180593740 - AluJo SINE Alu -32 280 1 2191 300 157 5 chr2 72662900 72663013 -180593570 + L2 LINE L2 465 559 -2755 2116 154 0 3 chr2 72663013 72663324 -180593259 - AluJb SINE Alu -2 310 1 2191 300 157 5 chr2 72663324 72664197 -180592386 + L2 LINE L2 559 1601 -1713 789 185 0 15 chr2 72664197 72664327 -180592256 + FLAM_A SINE Alu 1 128 -5 443 255 47 0 chr2 72664349 72664455 -180592128 + L2 LINE L2 3203 3313 0 260 0 57 0 chr2 72664621 72664656 -180591927 + (TTTTTA)n Simple_repeat Simple_repeat 5 41 0 1064 90 0 0 chr2 72664658 72664791 -180591792 - AluSq/x SINE Alu -179 133 1 1537 298 0 76 chr2 72664913 72665069 -180591514 + AluSx SINE Alu 2 122 -190 2342 70 17 3 chr2 72665069 72665367 -180591216 + AluSp SINE Alu 1 302 -11 1381 87 0 0 chr2 72665367 72665539 -180591044 + AluSg/x SINE Alu 134 305 -7 4903 167 31 22 chr2 72666429 72667635 -180588948 + L1MB3 LINE L1 4961 6180 -3 24 0 0 0 chr2 72667814 72667838 -180588745 + AT_rich Low_complexity Low_complexity 1 24 0 303 303 133 66 chr2 72668645 72668962 -180587621 - L3 LINE CR1 -6 1571 1234 598 256 170 21 chr2 72670054 72670436 -180586147 - L1ME4a LINE L1 -237 5884 5446 415 121 0 0 chr2 72670452 72670518 -180586065 - Alu SINE Alu -2 309 244 1020 103 0 0 chr2 72670521 72670647 -180585936 - AluSq/x SINE Alu -187 126 1 316 339 61 12 chr2 72670653 72670818 -180585765 - L1ME4a LINE L1 -693 5428 5256 1794 164 0 10 chr2 72670835 72671139 -180585444 - AluJb SINE Alu -7 305 5 259 278 102 53 chr2 72671401 72671795 -180584788 - L1ME4a LINE L1 -1317 4829 4401 2254 99 10 0 chr2 72671795 72672088 -180584495 - AluSc SINE Alu -13 296 1 259 278 102 53 chr2 72672088 72672222 -180584361 - L1ME4a LINE L1 -1745 4401 4275 1900 167 3 0 chr2 72672805 72673111 -180583472 + AluJb SINE Alu 1 307 -5 235 279 126 9 chr2 72673539 72673650 -180582933 - L3 LINE CR1 -824 753 630 291 28 0 0 chr2 72673797 72673833 -180582750 + (TG)n Simple_repeat Simple_repeat 1 36 0 744 125 0 102 chr2 72674451 72674579 -180582004 + FLAM_A SINE Alu 1 115 -18 34 55 0 0 chr2 72674579 72674634 -180581949 + AT_rich Low_complexity Low_complexity 1 55 0 427 232 226 0 chr2 72674723 72674887 -180581696 - MIR SINE MIR -3 259 59 23 33 0 0 chr2 72676458 72676488 -180580095 + AT_rich Low_complexity Low_complexity 1 30 0 2243 110 0 19 chr2 72676658 72676967 -180579616 + AluSx SINE Alu 1 303 -9 1772 75 0 0 chr2 72677747 72677987 -180578596 - AluSc SINE Alu 0 306 67 763 71 20 0 chr2 72677987 72678085 -180578498 - AluSc SINE Alu -208 101 2 192 40 0 0 chr2 72678086 72678111 -180578472 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 754 113 84 14 chr2 72678308 72678450 -180578133 + AluSg/x SINE Alu 145 296 -13 844 196 25 0 chr2 72678469 72678627 -180577956 - MER3 DNA MER1_type -80 129 15 21 0 0 0 chr2 72678790 72678811 -180577772 + AT_rich Low_complexity Low_complexity 1 21 0 1364 149 16 112 chr2 72678990 72679138 -180577445 + AluJo SINE Alu 1 103 -209 2273 94 0 0 chr2 72679138 72679426 -180577157 + AluSx SINE Alu 1 288 -24 1364 149 16 112 chr2 72679426 72679599 -180576984 + AluJo SINE Alu 103 291 -21 1070 298 160 45 chr2 72679742 72680832 -180575751 + L2 LINE L2 1955 3194 -78 1757 192 126 36 chr2 72680928 72681397 -180575186 + MER74A LTR ERVL 15 525 -33 1563 198 106 30 chr2 72681397 72681765 -180574818 + MSTD LTR MaLR 1 396 0 201 253 53 27 chr2 72681827 72681902 -180574681 - MIR SINE MIR -75 187 111 2805 181 81 5 chr2 72681970 72682599 -180573984 - L1MA9 LINE L1 -31 6281 5605 508 158 25 67 chr2 72682588 72682708 -180573875 + L1MD2 LINE L1 3824 3938 -2208 * 2895 177 64 56 chr2 72682736 72682832 -180573751 + L1MD2 LINE L1 4964 5058 -1301 2413 151 3 22 chr2 72682832 72683203 -180573380 - MLT1A1 LTR MaLR -1 364 1 2895 177 64 56 chr2 72683203 72683427 -180573156 + L1MD2 LINE L1 5058 5279 -1080 1504 163 78 34 chr2 72683427 72683721 -180572862 + AluJo SINE Alu 1 307 -5 2895 177 64 56 chr2 72683721 72684317 -180572266 + L1MD2 LINE L1 5279 5906 -453 1427 161 0 0 chr2 72684319 72684537 -180572046 + AluSx SINE Alu 1 218 -94 473 259 61 0 chr2 72684561 72684692 -180571891 + L1MD2 LINE L1 5894 6032 -327 406 246 7 80 chr2 72684872 72684972 -180571611 + L2 LINE L2 1855 1944 -1370 2333 148 6 12 chr2 72684972 72685311 -180571272 - MER1B DNA MER1_type 0 337 1 406 246 7 80 chr2 72685311 72685348 -180571235 + L2 LINE L2 1944 1982 -1332 708 246 48 6 chr2 72685349 72685516 -180571067 - MLT1D LTR MaLR -1 504 331 873 217 45 57 chr2 72685545 72685789 -180570794 - MLT1D LTR MaLR -264 241 1 2328 88 3 10 chr2 72686007 72686313 -180570270 - AluY SINE Alu -3 308 5 792 192 80 13 chr2 72686735 72686886 -180569697 - MER45A DNA AcHobo -17 161 1 251 320 19 0 chr2 72687064 72687167 -180569416 + L2 LINE L2 2682 2786 -528 194 281 73 0 chr2 72687327 72687409 -180569174 + MIR SINE MIR 175 262 0 319 332 52 82 chr2 72687414 72687646 -180568937 + L2 LINE L2 3035 3259 -13 2388 58 44 0 chr2 72687702 72687997 -180568586 - AluY SINE Alu -1 310 3 180 111 0 0 chr2 72688048 72688075 -180568508 + (GGAGAA)n Simple_repeat Simple_repeat 1 27 0 1346 107 0 0 chr2 72688205 72688382 -180568201 - AluSg/x SINE Alu -1 309 133 4878 83 25 2 chr2 72688765 72689392 -180567191 + L1PA10 LINE L1 5523 6164 -4 183 42 0 0 chr2 72689508 72689532 -180567051 + (TTG)n Simple_repeat Simple_repeat 2 25 0 195 42 0 0 chr2 72690100 72690124 -180566459 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2161 73 10 41 chr2 72690693 72691007 -180565576 - AluSg SINE Alu -6 304 1 259 243 29 58 chr2 72691395 72691498 -180565085 + MIR SINE MIR 129 228 -34 2104 88 9 64 chr2 72691560 72691889 -180564694 - AluY SINE Alu 0 311 1 885 159 0 0 chr2 72692004 72692136 -180564447 - FLAM_C SINE Alu -1 132 1 223 191 0 21 chr2 72692510 72692557 -180564026 + GA-rich Low_complexity Low_complexity 1 46 0 2315 111 0 3 chr2 72692696 72693003 -180563580 - AluSq SINE Alu -7 306 1 340 328 72 48 chr2 72693604 72694141 -180562442 - L2 LINE L2 -173 3099 2550 314 252 30 22 chr2 72694355 72694490 -180562093 + GA-rich Low_complexity Low_complexity 2 137 0 2201 111 0 7 chr2 72695452 72695759 -180560824 - AluSx SINE Alu -7 305 1 1330 204 12 0 chr2 72695762 72696012 -180560571 - AluJo SINE Alu -15 297 45 737 207 0 15 chr2 72696016 72696151 -180560432 - FLAM_A SINE Alu 0 133 1 466 106 0 0 chr2 72696168 72696234 -180560349 - MADE1 DNA Mariner 0 80 15 321 348 52 70 chr2 72696768 72696924 -180559659 - L2 LINE L2 -18 3254 3097 2306 111 3 0 chr2 72696924 72697230 -180559353 + AluSc SINE Alu 1 307 -2 321 348 52 70 chr2 72697230 72697401 -180559182 - L2 LINE L2 -175 3097 2933 1873 134 14 21 chr2 72697563 72697854 -180558729 + AluJo SINE Alu 1 289 -23 417 75 15 75 chr2 72698216 72698349 -180558234 + (TCC)n Simple_repeat Simple_repeat 3 127 0 477 182 0 0 chr2 72698361 72698509 -180558074 + (CTG)n Simple_repeat Simple_repeat 1 148 0 588 201 6 0 chr2 72698521 72698878 -180557705 + (CTG)n Simple_repeat Simple_repeat 1 359 0 276 234 26 26 chr2 72698879 72698956 -180557627 + CT-rich Low_complexity Low_complexity 3 79 0 985 171 0 18 chr2 72698962 72699132 -180557451 - FRAM SINE Alu -2 174 8 352 212 106 23 chr2 72700893 72701025 -180555558 - L1ME4a LINE L1 -13 6108 5966 492 281 127 56 chr2 72701041 72701575 -180555008 - L1ME4a LINE L1 -202 5919 5348 304 150 25 0 chr2 72701846 72701926 -180554657 + (TA)n Simple_repeat Simple_repeat 2 83 0 508 223 23 108 chr2 72701927 72702051 -180554532 - L1MC4a LINE L1 -301 5820 5853 2140 127 3 3 chr2 72702051 72702359 -180554224 - AluSx SINE Alu -4 308 1 508 223 23 108 chr2 72702359 72702549 -180554034 - L1MC4a LINE L1 -267 5854 5649 2292 104 3 16 chr2 72702586 72702758 -180553825 - AluSx SINE Alu -7 305 137 2402 102 0 0 chr2 72702758 72703061 -180553522 - AluY SINE Alu -8 303 1 2292 104 3 16 chr2 72703061 72703197 -180553386 - AluSx SINE Alu -175 137 1 241 276 79 26 chr2 72703294 72703370 -180553213 - MIR SINE MIR -66 196 117 1814 259 132 42 chr2 72704022 72704546 -180552037 + L2 LINE L2 2111 2586 -727 1918 154 0 0 chr2 72704546 72704832 -180551751 + AluSx SINE Alu 1 286 -26 1814 259 132 42 chr2 72704832 72705235 -180551348 + L2 LINE L2 2586 3135 -178 3503 149 34 28 chr2 72705240 72705694 -180550889 - L1MB7 LINE L1 -20 6164 5703 2355 112 0 0 chr2 72705694 72705999 -180550584 + AluSx SINE Alu 1 305 -7 3503 149 34 28 chr2 72705999 72706193 -180550390 - L1MB7 LINE L1 -481 5703 5512 460 272 94 11 chr2 72706208 72706399 -180550184 + L2 LINE L2 3107 3313 0 1537 151 23 15 chr2 72706991 72707250 -180549333 - AluJo SINE Alu -51 261 1 471 248 0 9 chr2 72708724 72708829 -180547754 + U13 snRNA snRNA 1 104 0 524 261 151 10 chr2 72709211 72709410 -180547173 + MIR SINE MIR 28 254 -8 2524 66 0 0 chr2 72709702 72710003 -180546580 + AluSq SINE Alu 1 301 -12 1999 125 7 0 chr2 72715368 72715647 -180540936 - AluSx SINE Alu -4 308 28 856 157 0 22 chr2 72715871 72716005 -180540578 - FLAM_C SINE Alu -2 131 1 406 0 0 0 chr2 72716013 72716058 -180540525 + (TTTTG)n Simple_repeat Simple_repeat 2 170 0 1836 101 89 0 chr2 72716058 72716315 -180540268 - AluSc SINE Alu -1 324 1 217 299 89 70 chr2 72716960 72717117 -180539466 - MIR SINE MIR -47 215 56 274 289 12 0 chr2 72718113 72718196 -180538387 + (TA)n Simple_repeat Simple_repeat 2 85 0 313 170 0 0 chr2 72718412 72718459 -180538124 + MER5B DNA MER1_type 2 48 -130 22 35 0 0 chr2 72718464 72718493 -180538090 + AT_rich Low_complexity Low_complexity 1 29 0 381 231 109 0 chr2 72718572 72718598 -180537985 - L1MC5 LINE L1 -36 7925 7903 2267 97 0 0 chr2 72718598 72718897 -180537686 + AluSx SINE Alu 1 299 -13 381 231 109 0 chr2 72718897 72719017 -180537566 - L1MC5 LINE L1 -58 7903 7763 210 111 0 74 chr2 72719040 72719094 -180537489 + (CAAAAA)n Simple_repeat Simple_repeat 1 50 0 635 200 32 8 chr2 72719168 72719293 -180537290 - MER5B DNA MER1_type -50 128 1 189 0 0 0 chr2 72719582 72719603 -180536980 + (TG)n Simple_repeat Simple_repeat 1 21 0 27 0 0 0 chr2 72719921 72719948 -180536635 + AT_rich Low_complexity Low_complexity 1 27 0 279 86 0 0 chr2 72720696 72720731 -180535852 + U2 snRNA snRNA 1 35 -153 206 298 106 10 chr2 72721033 72721137 -180535446 - L2 LINE L2 -5 3308 3195 186 43 0 0 chr2 72721246 72721269 -180535314 + (TG)n Simple_repeat Simple_repeat 1 23 0 373 261 130 7 chr2 72721272 72721410 -180535173 - L1ME4a LINE L1 0 6121 5967 617 244 199 10 chr2 72721424 72721825 -180534758 - L1ME4a LINE L1 -22 6099 5623 369 250 48 18 chr2 72721965 72722133 -180534450 - L1ME4a LINE L1 -2379 5429 5257 312 337 59 24 chr2 72722152 72722321 -180534262 - L1ME4a LINE L1 -1198 4948 4774 286 221 51 57 chr2 72722496 72722654 -180533929 - L1ME4a LINE L1 -1602 4544 4388 1268 169 112 0 chr2 72724586 72724853 -180531730 + AluJb SINE Alu 2 298 -14 2067 121 3 0 chr2 72724896 72725193 -180531390 - AluSx SINE Alu -14 298 1 718 309 44 25 chr2 72725746 72726273 -180530310 - L1M4 LINE L1 -1232 4914 4378 759 244 39 10 chr2 72726806 72727011 -180529572 - MIR SINE MIR 0 262 52 3562 88 25 4 chr2 72727040 72727560 -180529023 - L1MA2 LINE L1 0 6304 5774 23 0 0 0 chr2 72727619 72727642 -180528941 + AT_rich Low_complexity Low_complexity 1 23 0 243 103 0 0 chr2 72728213 72728252 -180528331 + (TG)n Simple_repeat Simple_repeat 2 40 0 22 35 0 0 chr2 72728875 72728904 -180527679 + AT_rich Low_complexity Low_complexity 1 29 0 2162 103 0 3 chr2 72728929 72729231 -180527352 + AluSq SINE Alu 13 313 0 210 265 20 0 chr2 72730049 72730098 -180526485 - L2 LINE L2 -4 3268 3219 960 248 53 13 chr2 72730598 72730901 -180525682 - L1MC4a LINE L1 -1802 6006 5692 482 191 0 0 chr2 72730914 72730998 -180525585 - Tigger5 DNA MER2_type -3 2320 2237 290 216 0 0 chr2 72731009 72731060 -180525523 - Tigger5 DNA MER2_type -2269 54 4 605 299 198 35 chr2 72731526 72732427 -180524156 + L2 LINE L2 2240 3268 -4 2131 114 3 0 chr2 72733615 72733914 -180522669 - AluSx SINE Alu -12 300 1 888 124 23 0 chr2 72733915 72734044 -180522539 - AluSq/x SINE Alu -177 135 4 26 0 0 0 chr2 72736147 72736173 -180520410 + AT_rich Low_complexity Low_complexity 1 26 0 207 0 0 0 chr2 72737864 72737887 -180518696 + (CA)n Simple_repeat Simple_repeat 2 24 0 324 272 48 0 chr2 72739640 72739743 -180516840 - L2 LINE L2 0 3313 3206 367 303 120 19 chr2 72740367 72740575 -180516008 - MIR SINE MIR -6 256 28 848 161 20 0 chr2 72741115 72741264 -180515319 + FRAM SINE Alu 20 171 -5 327 71 0 0 chr2 72741271 72741313 -180515270 + L1PA16 LINE L1 6116 6157 -9 22 0 0 0 chr2 72741313 72741335 -180515248 + AT_rich Low_complexity Low_complexity 1 22 0 542 329 58 17 chr2 72742318 72742558 -180514025 + MIR SINE MIR 12 261 -1 1094 160 5 5 chr2 72744052 72744258 -180512325 + AluJo SINE Alu 87 292 -20 235 345 75 24 chr2 72744315 72744567 -180512016 + L3 LINE CR1 556 820 -757 187 269 124 50 chr2 72744940 72745141 -180511442 + L2 LINE L2 2955 3170 -143 411 113 0 0 chr2 72745245 72745307 -180511276 + (TGAA)n Simple_repeat Simple_repeat 4 65 0 2213 107 0 0 chr2 72745816 72746116 -180510467 - AluSx SINE Alu -12 300 1 353 218 105 30 chr2 72746365 72746498 -180510085 - L1ME3A LINE L1 -219 5951 5809 273 145 0 105 chr2 72746510 72746560 -180510023 + L1ME LINE L1 5713 5754 -367 1978 121 0 10 chr2 72746560 72746903 -180509680 + AluSx SINE Alu 1 312 0 273 145 0 105 chr2 72746903 72746928 -180509655 + L1ME LINE L1 5754 5780 -341 245 158 70 0 chr2 72746971 72747028 -180509555 + GA-rich Low_complexity Low_complexity 4 64 0 2333 71 0 3 chr2 72747146 72747443 -180509140 + AluSc SINE Alu 3 298 -11 345 24 0 0 chr2 72747443 72747485 -180509098 + (TG)n Simple_repeat Simple_repeat 2 43 0 316 250 0 62 chr2 72747491 72747587 -180508996 - L1MC4 LINE L1 -1339 6703 6614 441 302 74 13 chr2 72748087 72748236 -180508347 + MIR SINE MIR 31 188 -74 1514 151 99 3 chr2 72748248 72748634 -180507949 + AluJb SINE Alu 1 413 0 810 141 19 70 chr2 72748669 72748825 -180507758 - MER20 DNA MER1_type -28 191 44 2166 97 3 34 chr2 72749697 72750018 -180506565 - AluSx SINE Alu -1 311 1 476 263 45 0 chr2 72750217 72750350 -180506233 - MER117 DNA MER1_type -36 161 23 202 286 107 0 chr2 72750700 72750756 -180505827 + L2 LINE L2 2999 3060 -212 2627 192 129 49 chr2 72751504 72751645 -180504938 + L1MC4 LINE L1 6389 6517 -1525 445 194 29 19 chr2 72751645 72751748 -180504835 + U13 snRNA snRNA 1 104 0 2627 192 129 49 chr2 72751748 72752321 -180504262 + L1MC4 LINE L1 6517 7160 -882 599 183 35 0 chr2 72752322 72752541 -180504042 + FLAM_A SINE Alu 21 243 0 3126 206 66 55 chr2 72752542 72753420 -180503163 + L1MC4 LINE L1 7141 8028 -14 401 236 174 50 chr2 72753567 72753728 -180502855 - MER5A DNA MER1_type 0 189 9 237 337 11 0 chr2 72756725 72756814 -180499769 - L3 LINE CR1 -276 1301 1212 2224 74 7 7 chr2 72756835 72757133 -180499450 - AluSc SINE Alu -10 299 2 422 216 41 0 chr2 72757615 72757712 -180498871 - MIR3 SINE MIR -1 207 107 951 177 12 0 chr2 72757896 72758060 -180498523 + FAM SINE Alu 2 167 -8 2094 88 28 0 chr2 72758069 72758354 -180498229 - AluSp SINE Alu -20 293 1 245 145 48 32 chr2 72758507 72758569 -180498014 + FRAM SINE Alu 33 95 -71 233 202 32 21 chr2 72760392 72760486 -180496097 + (CCG)n Simple_repeat Simple_repeat 2 96 0 * 348 211 45 23 chr2 72760421 72760554 -180496029 + (CCCG)n Simple_repeat Simple_repeat 4 139 0 344 170 6 79 chr2 72760585 72760750 -180495833 + C-rich Low_complexity Low_complexity 4 156 0 253 268 82 60 chr2 72761097 72761280 -180495303 + L2 LINE L2 2283 2469 -845 470 178 0 0 chr2 72761284 72761357 -180495226 - AluJ/FLAM SINE Alu -221 91 19 815 146 0 44 chr2 72761357 72761515 -180495068 - AluSg/x SINE Alu -36 276 126 339 111 0 0 chr2 72761519 72761564 -180495019 - Alu SINE Alu -255 46 2 351 277 241 7 chr2 72761753 72761894 -180494689 - L1M4 LINE L1 -1003 5143 4970 1300 186 3 114 chr2 72762274 72762608 -180493975 + AluJo SINE Alu 1 297 -5 277 78 0 39 chr2 72763752 72763803 -180492780 + (GGAA)n Simple_repeat Simple_repeat 1 49 0 2163 59 0 4 chr2 72763850 72764122 -180492461 + AluY SINE Alu 1 271 -40 830 149 21 7 chr2 72764223 72764392 -180492191 + AluSg/x SINE Alu 148 312 0 1508 150 7 72 chr2 72764404 72764711 -180491872 + AluJb SINE Alu 2 288 -24 588 263 39 83 chr2 72764722 72764927 -180491656 + L3 LINE CR1 1380 1575 -2 292 261 200 0 chr2 72765039 72765154 -180491429 + MIR SINE MIR 68 205 -57 2276 61 7 10 chr2 72765485 72765795 -180490788 + AluY SINE Alu 1 309 -2 912 72 79 0 chr2 72765795 72765984 -180490599 + AluY SINE Alu 133 332 0 1747 148 13 47 chr2 72765992 72766309 -180490274 + AluJb SINE Alu 1 306 -6 201 147 0 0 chr2 72766438 72766472 -180490111 + (TA)n Simple_repeat Simple_repeat 1 34 0 1378 121 5 5 chr2 72766515 72766722 -180489861 - AluSg/x SINE Alu -21 291 85 485 69 14 0 chr2 72766726 72766802 -180489781 + Alu SINE Alu 239 315 0 1974 99 65 0 chr2 72767707 72768000 -180488583 + AluSx SINE Alu 1 312 0 382 324 27 34 chr2 72768249 72768397 -180488186 + MIR3 SINE MIR 20 166 -42 2914 175 24 35 chr2 72770902 72771087 -180485496 - MER63C DNA MER1_type -134 927 741 2114 109 3 0 chr2 72771087 72771381 -180485202 - AluSp SINE Alu -17 296 2 2914 175 24 35 chr2 72771381 72771789 -180484794 - MER63C DNA MER1_type -320 741 341 1192 156 99 12 chr2 72771790 72772033 -180484550 + AluJo SINE Alu 1 264 -48 1772 195 23 11 chr2 72772053 72772402 -180484181 - MER63C DNA MER1_type -577 353 1 291 200 0 0 chr2 72772793 72772853 -180483730 + AluS SINE Alu 13 72 -231 522 31 0 0 chr2 72773143 72773207 -180483376 + (TCCA)n Simple_repeat Simple_repeat 3 66 0 1405 158 94 8 chr2 72773308 72773573 -180483010 + AluJo SINE Alu 1 288 -24 2035 128 0 0 chr2 72774033 72774330 -180482253 - AluSx SINE Alu -15 297 1 183 80 0 0 chr2 72774652 72774677 -180481906 + (GGCTG)n Simple_repeat Simple_repeat 5 29 0 1595 127 12 0 chr2 72775215 72775460 -180481123 - AluSq SINE Alu -65 248 1 21 0 0 0 chr2 72775460 72775481 -180481102 + AT_rich Low_complexity Low_complexity 1 21 0 563 270 79 20 chr2 72775489 72775793 -180480790 + L1ME4a LINE L1 5599 5920 -201 2192 110 0 0 chr2 72775929 72776239 -180480344 - AluSg SINE Alu 0 310 1 302 341 51 23 chr2 72777120 72777296 -180479287 + L1MC/D LINE L1 5288 5468 -2340 1158 179 18 0 chr2 72777432 72777655 -180478928 + L1MD3 LINE L1 7730 7956 -39 209 171 0 0 chr2 72779052 72779087 -180477496 - L2 LINE L2 -17 3255 3221 252 0 0 0 chr2 72779212 72779240 -180477343 + (CA)n Simple_repeat Simple_repeat 2 29 0 263 174 0 0 chr2 72780944 72780990 -180475593 - MER63 DNA MER1_type -36 1026 981 437 196 159 0 chr2 72780995 72781102 -180475481 - MER63 DNA MER1_type -86 750 1 620 200 0 52 chr2 72781286 72781421 -180475162 + AluSp/q SINE Alu 181 308 -5 5069 179 24 44 chr2 72781426 72781544 -180475039 + L1 LINE L1 3787 3906 -2240 2192 86 0 3 chr2 72781544 72781835 -180474748 - AluY SINE Alu -21 290 1 5069 179 24 44 chr2 72781835 72782402 -180474181 + L1 LINE L1 3906 4482 -1664 1783 138 21 3 chr2 72782402 72782725 -180473858 + AluSx SINE Alu 1 328 0 5069 179 24 44 chr2 72782725 72783571 -180473012 + L1 LINE L1 4482 5260 -886 318 294 34 25 chr2 72784001 72784120 -180472463 - L1MC5 LINE L1 -32 7929 7810 1660 185 30 0 chr2 72784127 72784425 -180472158 - AluSx SINE Alu -5 307 1 470 143 12 12 chr2 72784465 72784549 -180472034 - L1MC1 LINE L1 -2 6331 6248 2143 116 0 3 chr2 72784574 72784877 -180471706 - AluSx SINE Alu -10 302 1 390 240 10 10 chr2 72784978 72785074 -180471509 - L1ME4a LINE L1 -71 6050 5955 237 261 234 9 chr2 72785434 72785545 -180471038 + L2 LINE L2 3136 3271 -1 288 250 16 0 chr2 72785602 72785666 -180470917 + L2 LINE L2 3198 3262 -10 206 300 116 83 chr2 72787205 72787542 -180469041 - L2 LINE L2 -540 2774 2427 2140 114 0 0 chr2 72787634 72787931 -180468652 - AluSx SINE Alu -15 297 1 282 301 12 0 chr2 72787931 72788014 -180468569 - L3 LINE CR1 -248 1329 1246 213 194 0 0 chr2 72788448 72788484 -180468099 - L3 LINE CR1 -23 1554 1519 1851 101 64 24 chr2 72788577 72788875 -180467708 - AluSg SINE Alu 0 310 1 578 329 88 44 chr2 72788877 72789186 -180467397 - HAL1 LINE L1 -793 1714 1381 1522 113 0 5 chr2 72789186 72789408 -180467175 - AluSg/x SINE Alu -6 306 86 578 329 88 44 chr2 72789408 72789509 -180467074 - HAL1 LINE L1 -1126 1381 1286 366 204 214 0 chr2 72789523 72789621 -180466962 - MIR3 SINE MIR -54 154 36 239 194 104 15 chr2 72790387 72790420 -180466163 - MER45B DNA AcHobo -432 608 579 2150 81 0 50 chr2 72790420 72790742 -180465841 - AluSp SINE Alu -7 306 1 239 194 104 15 chr2 72790742 72790775 -180465808 - MER45B DNA AcHobo -461 579 536 21 82 0 0 chr2 72791490 72791539 -180465044 + AT_rich Low_complexity Low_complexity 1 49 0 317 312 25 43 chr2 72791645 72791921 -180464662 - L1MC4a LINE L1 -1815 5993 5723 464 291 222 15 chr2 72791922 72792255 -180464328 + L2 LINE L2 2181 2582 -732 328 281 0 10 chr2 72792279 72792375 -180464208 + MIR SINE MIR 168 262 0 233 198 0 139 chr2 72792407 72792493 -180464090 + L2 LINE L2 2638 2711 -603 1625 160 41 10 chr2 72792497 72792790 -180463793 + AluJb SINE Alu 1 302 -10 2110 91 7 0 chr2 72793850 72794137 -180462446 + AluSp SINE Alu 13 301 -12 403 328 79 16 chr2 72794143 72794332 -180462251 + L3 LINE CR1 675 875 -702 1247 174 105 16 chr2 72794929 72795187 -180461396 + AluJb SINE Alu 1 281 -31 2051 128 0 0 chr2 72795200 72795505 -180461078 + AluSx SINE Alu 1 305 -7 658 250 61 20 chr2 72795534 72795730 -180460853 + MIR SINE MIR 37 240 -22 210 335 161 19 chr2 72796253 72796408 -180460175 - MIR SINE MIR -29 233 57 422 171 21 157 chr2 72796932 72796966 -180459617 + L2 LINE L2 3193 3230 -83 3984 149 7 27 chr2 72796966 72797662 -180458921 - L1MB3 LINE L1 -2 6181 5500 422 171 21 157 chr2 72797662 72797767 -180458816 + L2 LINE L2 3230 3313 0 1560 151 30 30 chr2 72797903 72798207 -180458376 - AluJo SINE Alu -5 307 4 377 269 100 8 chr2 72799604 72799734 -180456849 - L2 LINE L2 0 3313 3172 2410 79 0 0 chr2 72800343 72800646 -180455937 + AluSc SINE Alu 1 303 -6 2342 90 0 0 chr2 72800648 72800959 -180455624 + AluY SINE Alu 1 311 0 305 197 16 16 chr2 72801093 72801154 -180455429 + MIR SINE MIR 96 156 -106 1477 218 78 36 chr2 72801158 72801543 -180455040 - MLT1C LTR MaLR -3 464 64 1357 38 0 0 chr2 72801555 72801714 -180454869 - L1PA3 LINE L1 -3 6152 5994 243 272 0 62 chr2 72801798 72801879 -180454704 + MIR SINE MIR 187 262 0 419 271 58 53 chr2 72802200 72802407 -180454176 + MARNA DNA Mariner 179 386 -200 2095 109 20 0 chr2 72802516 72802820 -180453763 + AluSg SINE Alu 1 310 0 312 361 34 34 chr2 72803880 72804118 -180452465 - L2 LINE L2 -924 2390 2153 844 187 0 20 chr2 72804119 72804269 -180452314 + FRAM SINE Alu 1 146 -30 536 122 0 41 chr2 72804273 72804371 -180452212 - AluSg/x SINE Alu -2 310 217 1869 122 11 0 chr2 72804450 72804728 -180451855 + AluSg SINE Alu 1 281 -29 243 0 0 0 chr2 72804728 72804755 -180451828 + (CTAAA)n Simple_repeat Simple_repeat 3 29 0 250 244 115 0 chr2 72806004 72806082 -180450501 - MER103 DNA DNA -3 163 77 1849 98 0 23 chr2 72807064 72807328 -180449255 + AluSx SINE Alu 37 294 -18 2076 95 17 0 chr2 72808349 72808644 -180447939 - AluSp SINE Alu -13 300 1 550 246 108 41 chr2 72809099 72809294 -180447289 + MIR SINE MIR 20 227 -35 201 184 0 0 chr2 72809769 72809807 -180446776 - MIR SINE MIR -62 146 109 5874 181 51 41 chr2 72809862 72809935 -180446648 + Charlie1a DNA MER1_type 5 76 -2685 2227 75 7 0 chr2 72809935 72810229 -180446354 - AluY SINE Alu -15 296 1 5874 181 51 41 chr2 72810229 72811383 -180445200 + Charlie1a DNA MER1_type 76 1251 -1510 1864 120 36 0 chr2 72811383 72811686 -180444897 + AluSq SINE Alu 1 313 0 5874 181 51 41 chr2 72811686 72811863 -180444720 + Charlie1a DNA MER1_type 1251 1425 -30 1189 233 15 12 chr2 72811870 72812201 -180444382 + L1M4 LINE L1 5072 5403 -743 1141 150 42 48 chr2 72812192 72812294 -180444289 + L1M3 LINE L1 5093 5194 -989 * 1843 170 13 0 chr2 72812294 72812600 -180443983 + AluJb SINE Alu 1 310 -2 1141 150 42 48 chr2 72812600 72812893 -180443690 + L1M3 LINE L1 5194 5480 -703 1746 227 44 35 chr2 72812904 72813128 -180443455 + L1 LINE L1 2213 2433 -3713 1390 173 35 0 chr2 72813128 72813359 -180443224 - MER8 DNA MER2_type 0 239 1 1746 227 44 35 chr2 72813359 72813456 -180443127 + L1 LINE L1 2433 2528 -3618 1838 149 0 0 chr2 72813456 72813738 -180442845 + AluSx SINE Alu 1 282 -30 1746 227 44 35 chr2 72813738 72813962 -180442621 + L1 LINE L1 2528 2764 -3382 1487 77 5 14 chr2 72814062 72814271 -180442312 - AluY SINE Alu -24 287 81 189 0 0 0 chr2 72814289 72814310 -180442273 + (A)n Simple_repeat Simple_repeat 1 21 0 625 241 135 6 chr2 72814313 72814483 -180442100 + MIR SINE MIR 23 214 -48 2114 101 3 10 chr2 72814506 72814812 -180441771 + AluSp SINE Alu 1 304 -9 427 293 104 50 chr2 72815199 72815421 -180441162 + MIR SINE MIR 8 241 -21 * 909 273 48 4 chr2 72815365 72815497 -180441086 - MIR SINE MIR -1 261 136 1724 176 80 101 chr2 72815497 72815924 -180440659 - MER47B DNA MER2_type 0 418 1 909 273 48 4 chr2 72815924 72816040 -180440543 - MIR SINE MIR -126 136 2 198 292 111 0 chr2 72816052 72816124 -180440459 + MIR SINE MIR 152 231 -31 2047 116 0 3 chr2 72816514 72816817 -180439766 + AluSq SINE Alu 1 302 -11 2028 79 40 4 chr2 72816828 72817106 -180439477 + AluSg SINE Alu 1 288 -22 1779 243 105 86 chr2 72817111 72818208 -180438375 - L2 LINE L2 -8 3305 2198 1055 194 19 23 chr2 72818208 72818424 -180438159 + AluJo SINE Alu 79 293 -19 652 251 123 8 chr2 72818427 72818678 -180437905 - L2 LINE L2 -1119 2195 1916 2207 111 14 0 chr2 72819169 72819466 -180437117 - AluSq SINE Alu -12 301 1 731 171 8 0 chr2 72819886 72820009 -180436574 - FLAM_C SINE Alu -19 124 1 469 82 282 0 chr2 72820138 72820223 -180436360 + MER72 LTR ERV1 585 693 -29 1606 103 0 9 chr2 72820234 72820448 -180436135 + AluSc SINE Alu 83 294 -15 1135 193 24 16 chr2 72820512 72820766 -180435817 - AluJb SINE Alu -1 311 56 801 278 17 33 chr2 72820893 72821221 -180435362 - L1MC/D LINE L1 -496 5625 5303 2228 136 3 0 chr2 72821221 72821531 -180435052 - AluJb SINE Alu -1 311 1 801 278 17 33 chr2 72821531 72821547 -180435036 - L1MC/D LINE L1 -818 5303 5288 22 35 0 0 chr2 72821609 72821638 -180434945 + AT_rich Low_complexity Low_complexity 1 29 0 207 0 0 0 chr2 72821679 72821702 -180434881 + (TG)n Simple_repeat Simple_repeat 1 23 0 760 176 0 8 chr2 72821703 72821834 -180434749 - FLAM_A SINE Alu 0 133 4 1957 135 3 10 chr2 72822354 72822650 -180433933 - AluSx SINE Alu 0 312 19 947 225 0 0 chr2 72822769 72822942 -180433641 + FAM SINE Alu 1 173 -2 2316 42 53 11 chr2 72823298 72823582 -180433001 - AluY SINE Alu -14 297 2 364 231 67 0 chr2 72823711 72823815 -180432768 - L1ME3 LINE L1 0 6162 6052 436 261 176 23 chr2 72823973 72824149 -180432434 + MIR SINE MIR 21 223 -39 294 276 191 33 chr2 72824201 72824353 -180432230 - MER5B DNA MER1_type -2 176 1 984 165 12 12 chr2 72824835 72824999 -180431584 - FRAM SINE Alu -12 164 1 278 239 147 74 chr2 72825014 72825177 -180431406 - L3b LINE CR1 -256 1327 1153 666 208 84 0 chr2 72825484 72825638 -180430945 + MER3 DNA MER1_type 1 167 -42 1770 137 13 50 chr2 72825638 72825937 -180430646 - AluJo SINE Alu -20 292 5 601 221 20 104 chr2 72826535 72826633 -180429950 + MER112 DNA MER1_type 8 113 -147 2512 63 0 13 chr2 72826633 72826936 -180429647 - AluY SINE Alu -12 299 1 601 221 20 104 chr2 72826936 72827000 -180429583 + MER112 DNA MER1_type 113 181 -79 207 88 0 0 chr2 72827000 72827034 -180429549 + (TTAA)n Simple_repeat Simple_repeat 3 36 0 2063 88 11 21 chr2 72827038 72827322 -180429261 - AluY SINE Alu -30 281 1 601 221 20 104 chr2 72827322 72827402 -180429181 + MER112 DNA MER1_type 184 235 -25 781 352 62 2 chr2 72829632 72830081 -180426502 + L2 LINE L2 2204 2679 -635 2065 95 7 29 chr2 72830118 72830424 -180426159 - L1PA13 LINE L1 0 6163 5865 449 312 42 75 chr2 72830429 72830737 -180425846 - L2 LINE L2 -5 3267 2970 252 297 96 30 chr2 72830763 72830987 -180425596 + L2 LINE L2 2709 2958 -314 2139 79 18 7 chr2 72831772 72832097 -180424486 + AluSx SINE Alu 1 328 0 1577 99 36 0 chr2 72832649 72832871 -180423712 + MER30 DNA MER1_type 1 230 0 24 0 0 0 chr2 72833236 72833260 -180423323 + AT_rich Low_complexity Low_complexity 1 24 0 2121 130 3 7 chr2 72833260 72833561 -180423022 + AluSx SINE Alu 1 300 -12 305 277 147 58 chr2 72833748 72833862 -180422721 - L1ME4a LINE L1 -152 5969 5867 2100 97 13 23 chr2 72833862 72834162 -180422421 - AluSp SINE Alu -16 297 1 305 277 147 58 chr2 72834162 72834271 -180422312 - L1ME4a LINE L1 -254 5867 5726 695 299 94 13 chr2 72834271 72834505 -180422078 - MIR SINE MIR -5 257 5 1096 82 19 204 chr2 72835162 72835431 -180421152 + MER20 DNA MER1_type 1 219 0 471 282 147 34 chr2 72835686 72836030 -180420553 + L1M4 LINE L1 2932 3324 -2822 1876 163 7 13 chr2 72836030 72836337 -180420246 + AluJb SINE Alu 1 305 -7 513 215 0 0 chr2 72836407 72836500 -180420083 - L2 LINE L2 0 3313 3221 2373 88 3 3 chr2 72836838 72837143 -180419440 - AluSc SINE Alu -4 305 1 1600 158 188 9 chr2 72837343 72837679 -180418904 - MSTD LTR MaLR 0 396 1 607 235 99 12 chr2 72837962 72838124 -180418459 - MIR SINE MIR 0 262 87 230 193 35 0 chr2 72839372 72839429 -180417154 + Alu SINE Alu 244 302 0 2319 87 3 17 chr2 72839479 72839778 -180416805 + AluSq SINE Alu 1 295 -18 1616 175 32 3 chr2 72839807 72840092 -180416491 - AluSx SINE Alu -19 293 1 1215 135 34 24 chr2 72840169 72840377 -180416206 - AluJo SINE Alu -1 311 102 604 250 114 52 chr2 72840413 72840598 -180415985 + L2 LINE L2 3021 3193 -120 2209 88 57 14 chr2 72840598 72840894 -180415689 - AluY SINE Alu -2 309 1 228 35 0 0 chr2 72840894 72840923 -180415660 + (TTTTG)n Simple_repeat Simple_repeat 1 29 0 1977 138 0 3 chr2 72840923 72841205 -180415378 - AluSx SINE Alu -31 281 1 604 250 114 52 chr2 72841205 72841289 -180415294 + L2 LINE L2 3192 3309 -4 265 303 209 43 chr2 72841289 72841683 -180414900 + L2 LINE L2 2768 3230 -42 884 236 18 0 chr2 72843205 72843370 -180413213 - FAM SINE Alu -7 168 1 434 232 11 130 chr2 72843496 72843681 -180412902 - MER5A DNA MER1_type -3 186 24 2263 88 0 55 chr2 72843704 72844011 -180412572 - AluSq SINE Alu -23 290 1 2040 128 19 45 chr2 72844031 72844344 -180412239 - AluSq SINE Alu -8 305 1 337 308 228 45 chr2 72844401 72844596 -180411987 + L2 LINE L2 2804 2962 -351 2400 98 7 0 chr2 72844596 72844901 -180411682 - AluSx SINE Alu -5 307 1 337 308 228 45 chr2 72844901 72845131 -180411452 + L2 LINE L2 2962 3307 -6 2104 112 3 14 chr2 72845197 72845484 -180411099 - AluSq SINE Alu -28 285 2 278 322 35 0 chr2 72845491 72845578 -180411005 + L2 LINE L2 2921 3010 -262 2184 137 3 0 chr2 72845656 72845956 -180410627 - AluSx SINE Alu -11 301 1 3036 113 53 13 chr2 72846069 72846540 -180410043 + MER1A DNA MER1_type 35 524 -5 549 41 27 0 chr2 72846656 72846729 -180409854 + L1PA7 LINE L1 6080 6154 0 2449 62 3 19 chr2 72846825 72847133 -180409450 + AluY SINE Alu 1 303 -8 2278 113 3 0 chr2 72847164 72847464 -180409119 + AluSq SINE Alu 1 301 -12 1535 164 25 15 chr2 72847479 72847753 -180408830 + AluSx SINE Alu 6 282 -30 2189 102 34 3 chr2 72847931 72848225 -180408358 + AluSc SINE Alu 1 303 -6 2292 116 0 0 chr2 72848235 72848528 -180408055 + AluSx SINE Alu 1 293 -19 355 269 0 67 chr2 72848557 72848661 -180407922 + L1MC4a LINE L1 5812 5908 -1900 186 43 0 0 chr2 72848749 72848772 -180407811 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 690 153 8 17 chr2 72848776 72848894 -180407689 - FLAM_C SINE Alu -25 118 2 1239 173 50 72 chr2 72849118 72849395 -180407188 - AluJb SINE Alu -41 271 1 310 311 159 25 chr2 72849399 72849986 -180406597 + L2 LINE L2 2394 3086 -186 2328 102 0 3 chr2 72850248 72850542 -180406041 + AluSx SINE Alu 1 293 -19 450 254 146 47 chr2 72850549 72850762 -180405821 + MER112 DNA MER1_type 17 250 -10 463 216 154 6 chr2 72850835 72850997 -180405586 - MER5C DNA MER1_type -3 321 136 375 298 21 11 chr2 72851206 72851300 -180405283 + MIR SINE MIR 36 130 -132 2443 70 0 17 chr2 72851418 72851720 -180404863 - AluSc SINE Alu -10 299 3 245 158 70 0 chr2 72851838 72851895 -180404688 + CT-rich Low_complexity Low_complexity 4 64 0 260 145 0 105 chr2 72851938 72851963 -180404620 - L1ME LINE L1 -341 5780 5754 2121 121 0 10 chr2 72851963 72852306 -180404277 - AluSx SINE Alu 0 312 1 260 145 0 105 chr2 72852306 72852356 -180404227 - L1ME LINE L1 -367 5754 5713 328 218 105 30 chr2 72852368 72852501 -180404082 + L1ME3A LINE L1 5809 5951 -219 301 331 61 7 chr2 72852599 72852747 -180403836 + L1ME3A LINE L1 5991 6146 -24 2273 107 7 0 chr2 72852750 72853048 -180403535 + AluSx SINE Alu 1 300 -12 411 113 0 0 chr2 72853557 72853619 -180402964 + (TTCA)n Simple_repeat Simple_repeat 4 65 0 207 269 124 50 chr2 72853722 72853923 -180402660 - L2 LINE L2 -143 3170 2955 263 343 94 29 chr2 72854292 72854537 -180402046 - L3 LINE CR1 -761 816 556 1192 165 5 5 chr2 72854588 72854800 -180401783 - AluJo SINE Alu -14 298 87 554 342 54 12 chr2 72856293 72856533 -180400050 - MIR SINE MIR -1 261 12 22 0 0 0 chr2 72857514 72857536 -180399047 + AT_rich Low_complexity Low_complexity 1 22 0 326 71 0 0 chr2 72857536 72857578 -180399005 - L1PA16 LINE L1 -9 6157 6116 868 161 20 0 chr2 72857585 72857734 -180398849 - FRAM SINE Alu -5 171 20 386 282 153 20 chr2 72858275 72858477 -180398106 + MIR SINE MIR 28 256 -6 329 272 48 0 chr2 72859101 72859204 -180397379 + L2 LINE L2 3206 3313 0 190 212 68 121 chr2 72859352 72859484 -180397099 + L2 LINE L2 2926 3050 -222 353 71 0 212 chr2 72860626 72860725 -180395858 + L1MA8 LINE L1 6202 6279 -12 2559 198 74 21 chr2 72860739 72861123 -180395460 + L1MB3 LINE L1 5478 5913 -270 1916 129 11 4 chr2 72861123 72861395 -180395188 + AluSq SINE Alu 1 274 -39 2559 198 74 21 chr2 72861395 72861671 -180394912 + L1MB3 LINE L1 5913 6173 -10 1083 237 72 7 chr2 72861659 72861963 -180394620 - L1MB1 LINE L1 -90 6078 5755 * 2416 90 0 0 chr2 72861979 72862279 -180394304 - AluY SINE Alu -11 300 1 900 169 70 106 chr2 72862279 72862371 -180394212 + L1MA10 LINE L1 6044 6138 -196 2349 78 3 10 chr2 72862371 72862664 -180393919 - AluSc SINE Alu -18 291 1 2200 86 7 4 chr2 72862670 72862973 -180393610 - AluY SINE Alu 0 304 1 900 169 70 106 chr2 72862973 72863005 -180393578 + L1MA10 LINE L1 6143 6175 -159 390 57 0 0 chr2 72863005 72863058 -180393525 + (CA)n Simple_repeat Simple_repeat 2 54 0 1834 179 0 13 chr2 72863062 72863370 -180393213 + AluJb SINE Alu 1 304 -8 900 169 70 106 chr2 72863370 72863533 -180393050 + L1MA10 LINE L1 6178 6334 0 1178 127 0 6 chr2 72864183 72864348 -180392235 + AluSg/x SINE Alu 134 297 -15 763 156 7 22 chr2 72864628 72864763 -180391820 + FLAM_C SINE Alu 1 133 0 260 309 0 25 chr2 72865243 72865324 -180391259 + CT-rich Low_complexity Low_complexity 6 84 0 30 27 0 0 chr2 72865726 72865763 -180390820 + AT_rich Low_complexity Low_complexity 1 37 0 752 211 0 0 chr2 72865945 72866078 -180390505 + FLAM_A SINE Alu 10 142 0 210 71 0 0 chr2 72866083 72866111 -180390472 + (GGA)n Simple_repeat Simple_repeat 2 29 0 1510 111 20 0 chr2 72866700 72866898 -180389685 + AluSx SINE Alu 1 202 -110 287 125 0 0 chr2 72866899 72866947 -180389636 + AluSp/q SINE Alu 246 293 -10 3518 130 33 10 chr2 72866956 72867627 -180388956 + L1MA7 LINE L1 4071 4756 -1390 1784 141 16 29 chr2 72867631 72867944 -180388639 + AluJb SINE Alu 1 309 -3 2715 162 102 14 chr2 72867959 72868633 -180387950 + L1MA7 LINE L1 5545 6293 -7 1181 160 98 25 chr2 72869208 72869452 -180387131 + MSTD LTR MaLR 1 262 -134 1045 140 12 0 chr2 72869455 72869619 -180386964 + FRAM SINE Alu 1 166 0 2131 127 3 3 chr2 72870018 72870317 -180386266 + AluSc SINE Alu 1 299 -10 227 204 0 37 chr2 72870565 72870619 -180385964 + CT-rich Low_complexity Low_complexity 4 55 0 362 282 153 18 chr2 72871508 72871678 -180384905 - L2 LINE L2 -3 3310 3118 201 380 22 0 chr2 72871817 72871909 -180384674 - MIR SINE MIR -5 257 164 2436 75 3 0 chr2 72872075 72872369 -180384214 + AluY SINE Alu 1 295 -16 902 264 32 21 chr2 72872393 72872673 -180383910 - MLT1K LTR MaLR -90 498 216 300 248 40 20 chr2 72872723 72872824 -180383759 - MLT1K LTR MaLR -468 120 18 1767 192 0 7 chr2 72873032 72873323 -180383260 + AluJo SINE Alu 1 289 -23 351 0 0 0 chr2 72873935 72873974 -180382609 + (CA)n Simple_repeat Simple_repeat 2 40 0 2105 67 16 29 chr2 72874531 72874846 -180381737 + AluY SINE Alu 1 311 0 609 112 0 0 chr2 72874876 72874965 -180381618 - AluSp/q SINE Alu -5 308 220 2261 83 0 7 chr2 72874970 72875258 -180381325 + AluSx SINE Alu 21 306 -6 21 0 0 0 chr2 72875430 72875451 -180381132 + AT_rich Low_complexity Low_complexity 1 21 0 1766 168 24 0 chr2 72875465 72875756 -180380827 + AluJo SINE Alu 1 298 -14 420 306 99 13 chr2 72875813 72875841 -180380742 + L1ME4a LINE L1 5417 5441 -680 1038 222 57 16 chr2 72875841 72876089 -180380494 - MIR SINE MIR 0 262 5 420 306 99 13 chr2 72876089 72876377 -180380206 + L1ME4a LINE L1 5441 5755 -366 355 272 22 0 chr2 72876397 72876489 -180380094 - L2 LINE L2 0 3313 3220 1749 185 3 7 chr2 72876489 72876781 -180379802 + AluJb SINE Alu 1 291 -21 281 134 179 0 chr2 72876787 72876854 -180379729 + LTR54 LTR ERV1 402 480 -30 641 220 66 33 chr2 72876857 72877039 -180379544 - L2 LINE L2 -90 3223 3036 395 270 135 7 chr2 72877086 72877234 -180379349 + L1ME4a LINE L1 5782 5948 -173 207 315 27 0 chr2 72878250 72878323 -180378260 - L2 LINE L2 -24 3289 3215 1871 75 155 0 chr2 72878850 72879102 -180377481 + AluSg SINE Alu 3 293 -17 2081 52 56 19 chr2 72879107 72879411 -180377172 + AluY SINE Alu 5 318 0 195 42 0 0 chr2 72879719 72879743 -180376840 + (CATA)n Simple_repeat Simple_repeat 1 24 0 2066 93 14 14 chr2 72879834 72880113 -180376470 + AluSx SINE Alu 18 296 -16 578 51 13 0 chr2 72880114 72880193 -180376390 + L1PA8A LINE L1 5683 5762 -369 1340 59 16 5 chr2 72882538 72882725 -180373858 + L1PA8A LINE L1 5914 6102 -29 841 164 15 0 chr2 72882785 72882919 -180373664 + AluJo SINE Alu 1 136 -176 1636 183 30 19 chr2 72882940 72883312 -180373271 + L1MB2 LINE L1 5751 6126 -45 2392 35 17 7 chr2 72883312 72883602 -180372981 + AluY SINE Alu 1 293 -18 22 0 0 0 chr2 72885907 72885929 -180370654 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 72887752 72887773 -180368810 + AT_rich Low_complexity Low_complexity 1 21 0 598 136 11 0 chr2 72889240 72889328 -180367255 - AluJ/FLAM SINE Alu -221 91 3 1746 120 11 50 chr2 72889422 72889705 -180366878 - AluSx SINE Alu -11 301 30 1268 195 3 112 chr2 72889732 72889874 -180366709 + AluSx SINE Alu 1 84 -228 2170 107 7 0 chr2 72889874 72890164 -180366419 + AluSp SINE Alu 1 292 -21 1268 195 3 112 chr2 72890164 72890370 -180366213 + AluSx SINE Alu 84 311 -1 403 249 108 3 chr2 72890682 72890846 -180365737 + MIR SINE MIR 32 216 -46 191 293 0 0 chr2 72891051 72891092 -180365491 + MIR SINE MIR 104 144 -118 510 272 80 19 chr2 72891248 72891410 -180365173 - MIR3 SINE MIR -28 180 9 713 260 75 0 chr2 72891849 72892022 -180364561 + MIR SINE MIR 8 193 -69 317 243 81 29 chr2 72892086 72892222 -180364361 - MER112 DNA MER1_type -104 156 14 221 231 0 19 chr2 72892231 72892283 -180364300 + MIR SINE MIR 195 245 -17 274 301 140 17 chr2 72892993 72893079 -180363504 + MIR SINE MIR 38 112 -150 189 0 0 0 chr2 72893079 72893100 -180363483 + (GA)n Simple_repeat Simple_repeat 2 22 0 274 301 140 17 chr2 72893100 72893201 -180363382 + MIR SINE MIR 112 250 -12 1944 118 12 71 chr2 72895102 72895425 -180361158 - AluSx SINE Alu -8 304 1 379 177 38 0 chr2 72896074 72896153 -180360430 - Charlie1 DNA MER1_type -2678 83 2 366 259 95 54 chr2 72896159 72896306 -180360277 - L1ME LINE L1 -554 5567 5415 1053 83 83 0 chr2 72896423 72896580 -180360003 - AluSc SINE Alu -16 293 124 497 275 68 8 chr2 72897120 72897356 -180359227 - L1ME LINE L1 -605 5516 5267 438 316 39 73 chr2 72897378 72897701 -180358882 - L1ME LINE L1 -935 5211 4903 292 311 74 0 chr2 72897742 72897890 -180358693 - MER117 DNA MER1_type -36 161 3 499 307 94 53 chr2 72897994 72898430 -180358153 - L1ME LINE L1 -1321 4825 4372 2044 134 6 13 chr2 72898430 72898744 -180357839 + AluSx SINE Alu 1 312 0 1335 97 0 28 chr2 72898785 72898925 -180357658 - AluSg/x SINE Alu -39 271 135 2414 96 3 0 chr2 72898925 72899237 -180357346 - AluSp SINE Alu 0 313 1 1335 97 0 28 chr2 72899237 72899272 -180357311 - AluSg/x SINE Alu -175 135 101 1023 108 0 0 chr2 72899386 72899516 -180357067 - AluSq/x SINE Alu -182 130 1 407 226 14 96 chr2 72899516 72899592 -180356991 + L2 LINE L2 3179 3239 -74 2296 111 0 0 chr2 72899592 72899889 -180356694 + AluSc SINE Alu 1 297 -12 407 226 14 96 chr2 72899889 72899958 -180356625 + L2 LINE L2 3239 3312 -1 2308 107 0 25 chr2 72900013 72900429 -180356154 + AluSx SINE Alu 2 409 0 223 285 111 49 chr2 72900448 72900592 -180355991 - L2 LINE L2 -1392 1922 1770 1143 186 9 49 chr2 72900594 72900820 -180355763 + AluJb SINE Alu 1 217 -95 279 137 0 0 chr2 72900821 72900872 -180355711 + AluSq/x SINE Alu 84 134 -169 468 141 0 0 chr2 72900881 72900959 -180355624 + AluS SINE Alu 232 309 0 1266 134 0 0 chr2 72900963 72901142 -180355441 + AluJb SINE Alu 131 309 -3 576 211 0 0 chr2 72901592 72901696 -180354887 - MER5B DNA MER1_type -74 104 1 210 218 36 0 chr2 72902024 72902079 -180354504 + (TG)n Simple_repeat Simple_repeat 2 58 0 2407 81 0 10 chr2 72902315 72902448 -180354135 + AluSc SINE Alu 1 134 -175 2395 101 0 3 chr2 72902448 72902756 -180353827 + AluSc SINE Alu 1 307 -2 2407 81 0 10 chr2 72902756 72902929 -180353654 + AluSc SINE Alu 134 304 -5 558 209 84 25 chr2 72903206 72903365 -180353218 + MER33 DNA MER1_type 1 150 -86 2194 112 7 0 chr2 72903367 72903662 -180352921 + AluSx SINE Alu 1 297 -15 279 0 0 0 chr2 72903684 72903715 -180352868 + (TG)n Simple_repeat Simple_repeat 2 32 0 1396 138 5 5 chr2 72903735 72903945 -180352638 - AluJo SINE Alu -77 235 26 2188 117 0 7 chr2 72904004 72904303 -180352280 + AluSx SINE Alu 1 297 -15 617 175 0 0 chr2 72904307 72904404 -180352179 - FRAM SINE Alu -47 129 33 2242 95 27 0 chr2 72904557 72904851 -180351732 + AluSp SINE Alu 1 302 -11 1037 170 6 0 chr2 72904851 72905016 -180351567 - FAM SINE Alu -8 167 2 459 214 31 0 chr2 72905201 72905299 -180351284 + MIR3 SINE MIR 107 207 -1 2693 42 0 7 chr2 72905781 72906091 -180350492 + AluY SINE Alu 2 309 -2 203 285 121 72 chr2 72906195 72906444 -180350139 + L2 LINE L2 2616 2876 -438 310 222 82 82 chr2 72906456 72906591 -180349992 + L2 LINE L2 3136 3270 -2 203 258 16 65 chr2 72906610 72906672 -180349911 + MIR3 SINE MIR 135 193 -15 605 111 81 0 chr2 72906875 72906974 -180349609 + L1MB3 LINE L1 6077 6183 0 1775 158 49 0 chr2 72906983 72907268 -180349315 + AluJb SINE Alu 2 300 -12 2389 103 0 0 chr2 72907660 72907962 -180348621 + AluSg SINE Alu 2 303 -7 1389 200 21 42 chr2 72907962 72908246 -180348337 - AluJo SINE Alu -31 281 3 2351 106 3 3 chr2 72908297 72908608 -180347975 + AluSp SINE Alu 1 311 -2 390 269 62 41 chr2 72909868 72910013 -180346570 - MIR SINE MIR -87 175 28 534 257 31 61 chr2 72910615 72910876 -180345707 - MER112 DNA MER1_type -3 253 1 434 301 149 19 chr2 72911149 72911253 -180345330 + L1ME LINE L1 5272 5361 -760 2064 122 23 0 chr2 72911253 72911556 -180345027 + AluSx SINE Alu 2 311 -1 434 301 149 19 chr2 72911556 72911813 -180344770 + L1ME LINE L1 5361 5680 -441 24 0 0 0 chr2 72911894 72911918 -180344665 + AT_rich Low_complexity Low_complexity 1 24 0 1781 213 46 58 chr2 72912178 72912613 -180343970 - L2 LINE L2 -141 3172 2733 2138 142 3 0 chr2 72912613 72912924 -180343659 - AluSx SINE Alu 0 312 1 1781 213 46 58 chr2 72912924 72913163 -180343420 - L2 LINE L2 -580 2733 2493 411 21 0 0 chr2 72913163 72913211 -180343372 + (TG)n Simple_repeat Simple_repeat 1 48 0 1781 213 46 58 chr2 72913211 72913223 -180343360 - L2 LINE L2 -820 2493 2482 2151 106 53 0 chr2 72913223 72913506 -180343077 + AluSx SINE Alu 1 298 -14 341 155 0 17 chr2 72913623 72913681 -180342902 + MER5B DNA MER1_type 122 178 0 2255 113 7 0 chr2 72913707 72914009 -180342574 - AluSp SINE Alu -9 304 1 193 118 39 39 chr2 72914016 72914067 -180342516 + T-rich Low_complexity Low_complexity 3 53 0 2428 82 0 7 chr2 72914109 72914414 -180342169 + AluY SINE Alu 1 303 -8 2193 113 6 25 chr2 72914648 72914966 -180341617 - AluSx SINE Alu 0 312 1 347 276 88 12 chr2 72915378 72915548 -180341035 - L1ME4a LINE L1 -224 5897 5715 1424 164 102 29 chr2 72915659 72915933 -180340650 - AluJo SINE Alu -13 299 6 566 298 54 33 chr2 72915993 72916235 -180340348 - MIR SINE MIR 0 262 16 1922 131 10 3 chr2 72916809 72917106 -180339477 + AluJo SINE Alu 2 300 -12 279 0 0 0 chr2 72917730 72917761 -180338822 + (TG)n Simple_repeat Simple_repeat 1 31 0 2388 38 45 0 chr2 72917808 72918096 -180338487 + AluY SINE Alu 1 301 -10 1732 131 6 43 chr2 72918097 72918425 -180338158 + L1MB7 LINE L1 5825 6140 -44 2082 125 10 0 chr2 72918425 72918713 -180337870 + AluSx SINE Alu 1 291 -21 772 159 10 115 chr2 72919305 72919451 -180337132 - L1MB4 LINE L1 -179 6001 5882 1894 126 16 16 chr2 72919451 72919760 -180336823 - AluJb SINE Alu -3 309 1 772 159 10 115 chr2 72919760 72919823 -180336760 - L1MB4 LINE L1 -298 5882 5814 1253 142 43 9 chr2 72919821 72920053 -180336530 - L1MB3 LINE L1 0 6183 5944 807 181 0 0 chr2 72920140 72920273 -180336310 - FLAM_C SINE Alu 0 133 1 204 296 20 61 chr2 72920315 72920413 -180336170 + L3b LINE CR1 1116 1209 -374 215 291 25 13 chr2 72920517 72920596 -180335987 + L3 LINE CR1 1212 1291 -286 2030 103 28 3 chr2 72920652 72920943 -180335640 - AluSx SINE Alu -14 298 1 942 169 7 0 chr2 72920966 72921120 -180335463 + AluJb SINE Alu 137 291 -21 287 261 130 9 chr2 72921120 72921235 -180335348 - MER33 DNA MER1_type -195 129 1 695 251 158 9 chr2 72921235 72921450 -180335133 + MIR SINE MIR 16 262 0 303 310 103 14 chr2 72921554 72921699 -180334884 + L1MC4a LINE L1 5191 5348 -798 973 208 140 5 chr2 72922234 72922441 -180334142 - MER45C DNA AcHobo 0 953 719 2337 68 0 0 chr2 72922480 72922774 -180333809 - AluY SINE Alu -17 294 1 1967 89 27 20 chr2 72922819 72923111 -180333472 - AluSq SINE Alu -15 298 5 2466 49 0 7 chr2 72923127 72923433 -180333150 - AluY SINE Alu -7 304 1 1116 141 20 15 chr2 72923433 72923632 -180332951 - L1MB3 LINE L1 -40 6143 5944 736 158 0 16 chr2 72923708 72923835 -180332748 - FLAM_C SINE Alu -1 142 18 2372 74 0 0 chr2 72924046 72924345 -180332238 + AluSc SINE Alu 1 299 -10 207 342 13 0 chr2 72924366 72924445 -180332138 + L3 LINE CR1 1212 1291 -286 711 67 0 0 chr2 72924502 72924592 -180331991 - AluSg/x SINE Alu -14 298 209 1277 126 0 0 chr2 72924592 72924795 -180331788 + AluSq SINE Alu 100 302 0 208 322 81 0 chr2 72924807 72924894 -180331689 - MIR SINE MIR -146 116 23 615 270 50 59 chr2 72924895 72925236 -180331347 + L1MC4a LINE L1 5708 6045 -1763 189 0 0 0 chr2 72925835 72925856 -180330727 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 266 224 65 75 chr2 72926118 72926225 -180330358 - L2 LINE L2 0 3313 3208 222 282 115 0 chr2 72928924 72929002 -180327581 + MER5A DNA MER1_type 18 104 -85 358 299 247 0 chr2 72929399 72929573 -180327010 + MIR SINE MIR 20 236 -26 1754 143 10 41 chr2 72929927 72930241 -180326342 + AluJb SINE Alu 1 304 -8 364 272 33 0 chr2 72930678 72930770 -180325813 + L2 LINE L2 3215 3309 -4 1192 169 72 79 chr2 72930951 72931146 -180325437 + Charlie1b DNA MER1_type 108 303 -2458 2225 79 7 0 chr2 72931146 72931449 -180325134 - AluSp SINE Alu -8 305 1 1192 169 72 79 chr2 72931449 72931613 -180324970 + Charlie1b DNA MER1_type 303 466 -2295 1613 154 24 20 chr2 72931613 72931906 -180324677 - AluJb SINE Alu -18 294 1 1192 169 72 79 chr2 72931906 72931964 -180324619 + Charlie1b DNA MER1_type 466 523 0 2080 95 0 16 chr2 72932050 72932355 -180324228 - AluSx SINE Alu -12 300 1 1271 137 91 0 chr2 72932370 72932589 -180323994 + AluSg/x SINE Alu 74 312 0 1648 158 22 118 chr2 72932743 72933242 -180323341 + L1MB7 LINE L1 4883 5333 -813 1091 164 0 76 chr2 72933242 72933480 -180323103 - AluJb SINE Alu -8 304 85 4250 130 20 71 chr2 72933482 72933638 -180322945 + L1MB7 LINE L1 5330 5492 -692 1661 148 41 14 chr2 72933638 72933928 -180322655 + AluJb SINE Alu 1 298 -14 4250 130 20 71 chr2 72933928 72934296 -180322287 + L1MB7 LINE L1 5492 5796 -388 2194 71 3 35 chr2 72934296 72934607 -180321976 + AluY SINE Alu 1 301 -10 4250 130 20 71 chr2 72934607 72934936 -180321647 + L1MB7 LINE L1 5796 6140 -44 2090 117 0 0 chr2 72934936 72935227 -180321356 + AluSx SINE Alu 1 291 -21 201 147 0 0 chr2 72935270 72935304 -180321279 + (TA)n Simple_repeat Simple_repeat 1 34 0 1747 148 13 47 chr2 72935433 72935750 -180320833 - AluJb SINE Alu -6 306 1 1491 138 43 22 chr2 72935758 72935946 -180320637 - AluSx SINE Alu 0 332 134 2426 71 0 0 chr2 72935946 72936255 -180320328 - AluY SINE Alu -2 309 1 1491 138 43 22 chr2 72936255 72936392 -180320191 - AluSx SINE Alu -198 134 1 827 128 0 50 chr2 72936397 72936538 -180320045 - AluJb SINE Alu -178 134 1 1554 180 17 3 chr2 72936571 72936930 -180319653 + AluSx SINE Alu 1 312 0 861 166 0 13 chr2 72937409 72937560 -180319023 + FRAM SINE Alu 20 168 -8 480 252 35 9 chr2 72937864 72937979 -180318604 - MIR SINE MIR -58 150 33 2330 57 0 3 chr2 72939189 72939489 -180317094 - AluY SINE Alu -12 299 1 2040 93 11 4 chr2 72939726 72940057 -180316526 + AluSx SINE Alu 1 333 0 1762 155 3 3 chr2 72940075 72940365 -180316218 + AluJb SINE Alu 1 290 -22 1944 144 17 0 chr2 72940377 72940676 -180315907 + AluSq SINE Alu 1 304 -9 2137 97 6 6 chr2 72941202 72941513 -180315070 - AluSp SINE Alu 0 313 3 21 36 0 0 chr2 72941535 72941563 -180315020 + AT_rich Low_complexity Low_complexity 1 28 0 641 179 0 65 chr2 72941570 72941693 -180314890 + FLAM_A SINE Alu 12 126 -16 1316 157 45 21 chr2 72941694 72941981 -180314602 - L1MA4 LINE L1 -10 6290 5997 1157 99 6 0 chr2 72941991 72942152 -180314431 - AluSq SINE Alu -18 295 134 2221 95 3 0 chr2 72942152 72942458 -180314125 - AluSg SINE Alu -3 307 1 548 239 60 107 chr2 72942493 72942801 -180313782 - L1MEd LINE L1 -5107 1012 691 2009 115 27 0 chr2 72942801 72943096 -180313487 - AluSx SINE Alu -9 303 1 548 239 60 107 chr2 72943096 72943132 -180313451 - L1MEd LINE L1 -5428 691 655 2114 100 4 0 chr2 72943132 72943441 -180313142 - AluSc SINE Alu 0 310 1 548 239 60 107 chr2 72943441 72943513 -180313070 - L1MEd LINE L1 -5464 655 614 590 276 61 27 chr2 72943513 72943810 -180312773 + L1ME LINE L1 5255 5561 -603 1926 126 0 27 chr2 72943815 72944116 -180312467 - AluSx SINE Alu -19 293 1 207 0 0 0 chr2 72944127 72944150 -180312433 + (T)n Simple_repeat Simple_repeat 1 23 0 686 185 0 0 chr2 72944392 72944500 -180312083 - HERVL18 LTR ERVL -5938 109 2 494 180 72 27 chr2 72944508 72944619 -180311964 - LTR18B LTR ERVL -13 601 486 575 238 6 110 chr2 72944644 72944801 -180311782 - LTR18A LTR ERVL -235 122 2 2347 116 61 0 chr2 72944801 72945163 -180311420 + L1PA16 LINE L1 5783 6166 0 234 0 0 0 chr2 72945210 72945236 -180311347 + (TTG)n Simple_repeat Simple_repeat 2 27 0 694 188 23 0 chr2 72945239 72945367 -180311216 - FLAM_C SINE Alu -2 131 1 2727 13 0 0 chr2 72945671 72945978 -180310605 - AluY SINE Alu -4 307 1 1759 156 0 42 chr2 72946253 72946561 -180310022 + AluJb SINE Alu 1 295 -17 368 101 0 174 chr2 72946568 72946677 -180309906 + MER53 DNA DNA 93 182 -7 299 157 57 14 chr2 72946617 72946687 -180309896 - MER53 DNA DNA -110 79 7 * 386 159 37 75 chr2 72946846 72946953 -180309630 - LTR41 LTR ERVL -592 181 79 332 281 174 48 chr2 72947028 72947224 -180309359 + L2 LINE L2 3006 3247 -66 2256 104 0 0 chr2 72947224 72947532 -180309051 - AluSx SINE Alu -4 308 1 332 281 174 48 chr2 72947532 72947605 -180308978 + L2 LINE L2 3247 3309 -4 255 68 169 34 chr2 72947820 72947879 -180308704 + Looper DNA T2_type 1251 1317 -241 2081 101 3 14 chr2 72947994 72948290 -180308293 - AluSx SINE Alu -19 293 1 368 259 126 23 chr2 72948295 72948469 -180308114 - L2 LINE L2 -963 2351 2160 1906 151 0 7 chr2 72948504 72948808 -180307775 + AluJo SINE Alu 1 302 -10 2383 68 0 3 chr2 72949088 72949397 -180307186 - AluY SINE Alu -3 308 1 2137 105 3 0 chr2 72949397 72949692 -180306891 - AluSx SINE Alu -7 305 10 1563 142 39 48 chr2 72949729 72950038 -180306545 + AluJo SINE Alu 1 306 -6 2232 98 0 0 chr2 72950049 72950356 -180306227 + AluSg SINE Alu 1 307 -3 358 133 29 181 chr2 72950391 72950434 -180306149 - MER4D LTR ERV1 -267 636 617 1997 128 0 3 chr2 72950434 72950738 -180305845 + AluSx SINE Alu 5 307 -5 358 133 29 181 chr2 72950738 72950799 -180305784 - MER4D LTR ERV1 -286 617 548 462 207 0 28 chr2 72950801 72950920 -180305663 - MER4E LTR ERV1 -588 284 62 * 1368 171 60 14 chr2 72950906 72951187 -180305396 - MER49 LTR ERV1 -629 294 1 2121 78 10 23 chr2 72951300 72951609 -180304974 - AluSc SINE Alu -4 305 1 209 303 152 10 chr2 72951781 72951880 -180304703 + L3 LINE CR1 1271 1383 -194 909 128 7 0 chr2 72952031 72952172 -180304411 - FLAM_C SINE Alu 0 143 2 328 198 132 22 chr2 72953008 72953099 -180303484 + MIR SINE MIR 121 221 -41 2386 67 3 0 chr2 72953745 72954044 -180302539 + AluY SINE Alu 4 303 -8 1977 110 0 27 chr2 72954051 72954351 -180302232 + AluSq SINE Alu 1 292 -21 1822 142 0 10 chr2 72954366 72954655 -180301928 + AluSx SINE Alu 6 291 -21 342 322 0 0 chr2 72954655 72954745 -180301838 - L1MC4 LINE L1 -1340 6702 6613 1197 170 14 31 chr2 72954783 72955006 -180301577 - MER20 DNA MER1_type 0 219 1 211 221 118 29 chr2 72955141 72955209 -180301374 + MIR SINE MIR 67 140 -68 316 206 73 0 chr2 72955216 72955284 -180301299 - L1MC4 LINE L1 -1333 6709 6637 22 0 0 0 chr2 72955295 72955317 -180301266 + AT_rich Low_complexity Low_complexity 1 22 0 5934 21 7 0 chr2 72955368 72956042 -180300541 + L1PA3 LINE L1 5470 6148 -7 183 42 0 0 chr2 72956045 72956069 -180300514 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2162 106 3 10 chr2 72956172 72956484 -180300099 - AluSq SINE Alu -3 310 1 394 186 27 13 chr2 72956589 72956628 -180299955 - L1MC2 LINE L1 -1 7966 7929 2211 88 0 10 chr2 72956628 72956923 -180299660 - AluSx SINE Alu -20 292 1 394 186 27 13 chr2 72956923 72957115 -180299468 - L1MC2 LINE L1 -38 7929 6152 2272 85 0 7 chr2 72957116 72957422 -180299161 - AluSx SINE Alu -8 304 1 1493 180 157 0 chr2 72957443 72957788 -180298795 - L1MD3 LINE L1 -6 7989 7591 586 266 21 11 chr2 72957825 72958026 -180298557 + L1MC/D LINE L1 5614 5817 -542 2351 68 7 0 chr2 72958058 72958366 -180298217 + AluSp SINE Alu 1 310 -3 2129 124 0 0 chr2 72958368 72958674 -180297909 + AluY SINE Alu 1 306 -5 695 106 8 2 chr2 72958677 72958914 -180297669 + AluSx SINE Alu 1 289 -23 1576 152 0 19 chr2 72959054 72959317 -180297266 + AluJo SINE Alu 12 269 -43 2006 94 45 3 chr2 72959438 72959725 -180296858 + AluY SINE Alu 1 299 -12 1447 187 37 4 chr2 72959725 72959998 -180296585 - AluJo SINE Alu -30 282 1 2305 69 0 0 chr2 72960756 72961047 -180295536 + AluSg SINE Alu 1 291 -19 1771 162 10 7 chr2 72962123 72962432 -180294151 - AluJb SINE Alu 0 312 3 2043 144 0 0 chr2 72962522 72962828 -180293755 - AluSx SINE Alu -6 306 1 2186 92 0 0 chr2 72962837 72963144 -180293439 - AluSx SINE Alu 0 307 1 1021 153 74 14 chr2 72963183 72963398 -180293185 - AluJb SINE Alu 0 312 85 31 44 0 0 chr2 72963704 72963749 -180292834 + AT_rich Low_complexity Low_complexity 1 45 0 727 171 0 8 chr2 72963749 72963866 -180292717 - AluJb SINE Alu -195 117 2 207 69 0 0 chr2 72964178 72964207 -180292376 + (CA)n Simple_repeat Simple_repeat 2 30 0 1992 100 36 0 chr2 72964207 72964488 -180292095 - AluSx SINE Alu -8 304 14 2081 102 0 3 chr2 72964523 72964829 -180291754 - AluSx SINE Alu 0 305 1 258 56 0 0 chr2 72965073 72965109 -180291474 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1824 143 0 14 chr2 72965114 72965400 -180291183 - AluJb SINE Alu -30 282 1 909 123 68 0 chr2 72965716 72965862 -180290721 - AluSg/x SINE Alu -22 290 135 2142 119 0 0 chr2 72965862 72966164 -180290419 - AluSq SINE Alu -11 302 1 444 250 30 39 chr2 72966164 72966362 -180290221 + L1ME4a LINE L1 5632 5829 -292 1088 171 0 11 chr2 72966362 72966538 -180290045 + FAM SINE Alu 2 175 0 444 250 30 39 chr2 72966538 72966571 -180290012 + L1ME4a LINE L1 5829 5861 -260 750 142 77 44 chr2 72966579 72966637 -180289946 - MER53 DNA DNA 0 189 134 2059 77 7 0 chr2 72966637 72966909 -180289674 - AluY SINE Alu -15 296 23 750 142 77 44 chr2 72966909 72967033 -180289550 - MER53 DNA DNA -55 134 1 1594 43 0 90 chr2 72967659 72967892 -180288691 + L1PA13 LINE L1 5856 6067 -96 816 160 0 8 chr2 72967893 72968024 -180288559 + AluSq/x SINE Alu 2 131 -181 36 23 0 0 chr2 72968079 72968122 -180288461 + AT_rich Low_complexity Low_complexity 1 43 0 1733 202 42 13 chr2 72968126 72968183 -180288400 + L1MD2 LINE L1 5944 5998 -361 2091 114 3 3 chr2 72968183 72968480 -180288103 + AluSq SINE Alu 1 297 -16 1733 202 42 13 chr2 72968480 72968805 -180287778 + L1MD2 LINE L1 5998 6337 -22 1987 121 7 0 chr2 72968809 72969128 -180287455 - AluSx SINE Alu 0 321 1 1152 181 184 53 chr2 72969264 72969530 -180287053 + AluJb SINE Alu 1 301 -1 2111 117 0 22 chr2 72969573 72969889 -180286694 + AluSx SINE Alu 1 309 -3 1731 149 22 0 chr2 72969990 72970265 -180286318 - AluSx SINE Alu -23 289 9 186 43 0 0 chr2 72970475 72970498 -180286085 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 898 180 7 0 chr2 72970502 72970652 -180285931 - AluJb SINE Alu -28 284 134 2571 55 0 0 chr2 72970652 72970945 -180285638 - AluY SINE Alu -18 293 1 1672 90 34 4 chr2 72971008 72971241 -180285342 - AluSg/x SINE Alu -6 304 65 1771 131 35 11 chr2 72971242 72971524 -180285059 + AluSx SINE Alu 11 299 -13 506 214 10 0 chr2 72971620 72971718 -180284865 + AluJo/FLAM SINE Alu 29 127 -185 2476 78 3 0 chr2 72971720 72972028 -180284555 + AluSq SINE Alu 1 309 -4 324 70 0 0 chr2 72972488 72972531 -180284052 + (TG)n Simple_repeat Simple_repeat 1 43 0 247 100 25 0 chr2 72972612 72972652 -180283931 + Alu SINE Alu 87 127 -175 * 344 180 0 0 chr2 72972649 72972710 -180283873 + Alu SINE Alu 235 295 -7 607 184 14 21 chr2 72972766 72972907 -180283676 + AluSq/x SINE Alu 2 141 -172 1999 142 7 16 chr2 72973436 72973746 -180282837 - AluSx SINE Alu -2 310 4 2409 52 3 3 chr2 72973772 72974059 -180282524 + AluY SINE Alu 1 287 -24 2301 101 0 0 chr2 72974148 72974446 -180282137 + AluSq SINE Alu 1 298 -15 1210 179 34 84 chr2 72974551 72974659 -180281924 + AluJo SINE Alu 1 113 -199 2086 120 17 0 chr2 72974659 72974950 -180281633 - AluSx SINE Alu -16 296 1 1210 179 34 84 chr2 72974950 72974979 -180281604 + AluJo SINE Alu 113 142 -170 180 0 0 0 chr2 72974979 72974999 -180281584 + (GAAA)n Simple_repeat Simple_repeat 2 21 0 1210 179 34 84 chr2 72974999 72975010 -180281573 + AluJo SINE Alu 142 152 -160 2221 107 3 0 chr2 72975010 72975310 -180281273 + AluSx SINE Alu 6 306 -6 1210 179 34 84 chr2 72975310 72975456 -180281127 + AluJo SINE Alu 152 282 -30 2177 104 10 0 chr2 72975456 72975754 -180280829 - AluSp SINE Alu -11 302 2 211 232 43 14 chr2 72976013 72976082 -180280501 - MIR SINE MIR -112 150 80 2218 117 0 10 chr2 72976871 72977180 -180279403 + AluSx SINE Alu 1 306 -6 759 178 7 0 chr2 72977478 72977613 -180278970 + AluJo SINE Alu 1 136 -176 2138 99 7 17 chr2 72977706 72978008 -180278575 - AluSx SINE Alu -13 299 1 2135 53 88 32 chr2 72978128 72978413 -180278170 + AluY SINE Alu 1 301 -10 1162 83 7 0 chr2 72978422 72978566 -180278017 + AluSq/x SINE Alu 1 145 -168 2039 107 7 7 chr2 72978566 72978889 -180277694 + AluSc SINE Alu 1 323 0 2152 125 7 0 chr2 72979091 72979394 -180277189 - AluSx SINE Alu -7 305 1 2298 101 0 0 chr2 72979501 72979798 -180276785 - AluSx SINE Alu -15 297 1 2324 62 7 23 chr2 72979807 72980140 -180276443 - AluY SINE Alu 0 311 1 2095 140 0 16 chr2 72980421 72980735 -180275848 - AluJo SINE Alu -3 309 1 1092 141 6 0 chr2 72980807 72980970 -180275613 - FAM SINE Alu -8 167 4 2315 105 3 0 chr2 72981143 72981438 -180275145 - AluSp SINE Alu -17 296 1 2557 71 0 3 chr2 72981485 72981795 -180274788 - AluSx SINE Alu -3 309 1 846 171 0 14 chr2 72981855 72981995 -180274588 + AluJ SINE Alu 5 142 -170 346 70 0 127 chr2 72981995 72982037 -180274546 + MER41B LTR ERV1 481 512 -123 2305 93 7 10 chr2 72982037 72982347 -180274236 - AluSc SINE Alu 0 309 1 346 70 0 127 chr2 72982347 72982375 -180274208 + MER41B LTR ERV1 512 542 -93 1099 153 6 0 chr2 72982375 72982566 -180274017 + AluJ SINE Alu 119 310 0 290 268 61 69 chr2 72982631 72982862 -180273721 - L1 LINE L1 -1193 4953 4725 835 101 6 107 chr2 72982871 72983030 -180273553 - FLAM_C SINE Alu 0 143 1 2689 40 0 0 chr2 72983726 72984030 -180272553 + AluY SINE Alu 1 304 -7 545 113 13 200 chr2 72984350 72984500 -180272083 + MER34B LTR ERV1 5 126 -439 40 83 0 0 chr2 72984500 72984596 -180271987 + AT_rich Low_complexity Low_complexity 1 96 0 2310 85 17 0 chr2 72984637 72984930 -180271653 - AluY SINE Alu -13 298 1 457 182 23 0 chr2 72985341 72985429 -180271154 + MER34B LTR ERV1 109 198 -367 1309 148 45 28 chr2 72985433 72985872 -180270711 + LTR54 LTR ERV1 1 510 0 * 1394 186 48 82 chr2 72985872 72986003 -180270580 + MER34B LTR ERV1 199 333 -232 2386 85 20 0 chr2 72986003 72986308 -180270275 - AluSp SINE Alu 0 313 3 1394 186 48 82 chr2 72986308 72986455 -180270128 + MER34B LTR ERV1 333 463 -102 1595 159 90 17 chr2 72986455 72986745 -180269838 - AluJb SINE Alu -1 311 1 1394 186 48 82 chr2 72986745 72986840 -180269743 + MER34B LTR ERV1 463 560 -5 1947 141 37 7 chr2 72986881 72987180 -180269403 + AluSx SINE Alu 1 308 -4 2258 98 0 14 chr2 72987191 72987487 -180269096 + AluSx SINE Alu 6 297 -15 1981 123 6 35 chr2 72988090 72988406 -180268177 + AluJb SINE Alu 1 307 -5 226 190 25 89 chr2 72988409 72988488 -180268095 + L1MB8 LINE L1 5681 5754 -2054 1945 120 3 47 chr2 72988584 72988731 -180267852 + AluJb SINE Alu 1 128 -184 2478 74 0 3 chr2 72988731 72989030 -180267553 + AluSq SINE Alu 1 298 -15 1945 120 3 47 chr2 72989030 72989199 -180267384 + AluJb SINE Alu 128 303 -9 1642 114 8 4 chr2 72989199 72989435 -180267148 + AluSx SINE Alu 1 237 -75 1338 130 85 28 chr2 72989435 72989524 -180267059 + AluSx SINE Alu 50 133 -179 2351 72 14 3 chr2 72989524 72989816 -180266767 + AluSp SINE Alu 1 295 -18 1338 130 85 28 chr2 72989816 72989973 -180266610 + AluSx SINE Alu 133 310 -2 1825 153 22 31 chr2 72990175 72990535 -180266048 + L1MB8 LINE L1 5777 6133 -45 334 239 196 54 chr2 72990582 72990720 -180265863 + MARNA DNA Mariner 336 508 -78 1651 114 100 21 chr2 72990720 72991009 -180265574 - AluSx SINE Alu 0 312 1 334 239 196 54 chr2 72991009 72991054 -180265529 + MARNA DNA Mariner 508 545 -41 2241 102 9 25 chr2 72991166 72991481 -180265102 + AluSx SINE Alu 3 312 0 432 248 39 16 chr2 72991529 72991658 -180264925 - L1ME LINE L1 -365 5756 5625 2256 116 3 0 chr2 72991826 72992136 -180264447 - AluSx SINE Alu -1 311 1 635 0 0 0 chr2 72992560 72992631 -180263952 + tRNA-Gly-GGG tRNA tRNA 1 71 -3 2239 99 0 37 chr2 72994695 72995017 -180261566 - AluSx SINE Alu -2 310 1 2234 108 0 3 chr2 72995397 72995692 -180260891 + AluSx SINE Alu 1 294 -18 1928 113 22 25 chr2 72996320 72996595 -180259988 + AluSx SINE Alu 1 274 -38 2410 66 0 0 chr2 72996749 72997035 -180259548 - AluY SINE Alu -6 305 20 517 286 156 33 chr2 72997155 72997845 -180258738 - L2 LINE L2 -3 3310 2480 180 0 0 0 chr2 72998156 72998176 -180258407 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1729 175 11 4 chr2 72998179 72998459 -180258124 - AluJb SINE Alu -28 284 3 1737 122 132 26 chr2 72998663 72998967 -180257616 - MER1B DNA MER1_type -1 336 1 1560 122 152 4 chr2 72999086 72999356 -180257227 - AluSx SINE Alu -2 310 1 911 146 244 14 chr2 72999472 72999685 -180256898 - L1MD3 LINE L1 -77 7918 7657 420 181 0 0 chr2 72999686 72999758 -180256825 - AluJb SINE Alu -15 297 226 1157 150 0 21 chr2 72999758 72999945 -180256638 - AluJb SINE Alu -125 187 5 483 271 25 8 chr2 73000014 73000132 -180256451 - MLT1F1 LTR MaLR -445 122 3 2253 85 17 7 chr2 73000148 73000442 -180256141 - AluSc SINE Alu -12 297 1 966 190 52 21 chr2 73000448 73000700 -180255883 - L1MD3 LINE L1 -715 7304 7060 1716 166 0 11 chr2 73000743 73001020 -180255563 - AluSx SINE Alu -38 274 1 691 176 8 23 chr2 73001029 73001160 -180255423 - FLAM_A SINE Alu -1 132 4 629 247 134 39 chr2 73001205 73001781 -180254802 - L1MC5 LINE L1 -496 7510 7000 2487 59 0 0 chr2 73002215 73002504 -180254079 + AluY SINE Alu 1 289 -22 1557 158 3 64 chr2 73002522 73002833 -180253750 - AluJo SINE Alu -15 297 6 1480 113 4 13 chr2 73003117 73003346 -180253237 + AluSg/x SINE Alu 84 310 -2 2449 71 0 7 chr2 73003431 73003727 -180252856 - AluY SINE Alu -17 294 1 2074 111 10 7 chr2 73003727 73004024 -180252559 - AluSx SINE Alu -14 298 1 2088 127 7 0 chr2 73004195 73004486 -180252097 - AluSx SINE Alu -19 293 1 1591 173 13 33 chr2 73004673 73004974 -180251609 + AluJb SINE Alu 1 295 -17 558 221 49 0 chr2 73004988 73005110 -180251473 + FLAM_A SINE Alu 1 128 -5 2335 88 3 3 chr2 73005110 73005404 -180251179 + AluSp SINE Alu 3 296 -17 357 24 0 0 chr2 73006023 73006065 -180250518 + (CA)n Simple_repeat Simple_repeat 2 43 0 241 182 0 0 chr2 73006121 73006165 -180250418 + LTR24C LTR ERV1 519 562 -73 2304 103 3 0 chr2 73006182 73006473 -180250110 - AluSp SINE Alu -21 292 1 240 35 0 0 chr2 73006546 73006575 -180250008 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 22 43 0 21 chr2 73006712 73006747 -180249836 + AT_rich Low_complexity Low_complexity 1 36 -10 2266 88 7 0 chr2 73006747 73007030 -180249553 + AluSg SINE Alu 1 285 -25 22 43 0 21 chr2 73007030 73007041 -180249542 + AT_rich Low_complexity Low_complexity 36 46 0 2198 121 3 0 chr2 73007823 73008120 -180248463 - AluSg SINE Alu -12 298 1 859 133 0 0 chr2 73008342 73008462 -180248121 + FLAM_C SINE Alu 7 126 -17 2186 118 3 0 chr2 73008723 73009020 -180247563 - AluSx SINE Alu -14 298 1 2631 67 3 0 chr2 73009033 73009345 -180247238 - AluSp SINE Alu 0 313 1 2533 57 3 22 chr2 73009366 73009682 -180246901 - AluY SINE Alu 0 311 2 791 125 0 23 chr2 73010143 73010271 -180246312 - FLAM_A SINE Alu 0 142 18 2263 105 0 13 chr2 73010282 73010586 -180245997 - AluSg SINE Alu -10 300 1 2201 126 0 3 chr2 73010936 73011238 -180245345 - AluSq SINE Alu -12 301 1 2272 91 3 16 chr2 73011340 73011648 -180244935 - AluY SINE Alu -5 306 3 2091 125 3 0 chr2 73011649 73011938 -180244645 - AluSx SINE Alu -10 302 13 2197 112 10 0 chr2 73017389 73017692 -180238891 + AluSx SINE Alu 1 306 -6 21 0 0 0 chr2 73017711 73017732 -180238851 + AT_rich Low_complexity Low_complexity 1 21 0 430 240 221 0 chr2 73017733 73017837 -180238746 + FLAM_C SINE Alu 3 129 -14 30 27 0 0 chr2 73017837 73017874 -180238709 + AT_rich Low_complexity Low_complexity 1 37 0 1871 161 28 0 chr2 73017893 73018179 -180238404 + AluJb SINE Alu 1 294 -18 2344 83 3 3 chr2 73018683 73018972 -180237611 - AluSg SINE Alu -20 290 2 314 337 103 17 chr2 73019101 73019276 -180237307 + L2 LINE L2 1080 1269 -2045 186 270 100 30 chr2 73019320 73019420 -180237163 + L2 LINE L2 1486 1592 -1722 1216 174 39 35 chr2 73019483 73019527 -180237056 - L1MB7 LINE L1 -1 6183 6141 1744 164 43 0 chr2 73019527 73019808 -180236775 + AluJb SINE Alu 1 293 -19 1216 174 39 35 chr2 73019808 73020045 -180236538 - L1MB7 LINE L1 -43 6141 5901 1681 141 6 70 chr2 73020126 73020302 -180236281 - AluJo SINE Alu -19 293 144 2285 102 0 0 chr2 73020302 73020587 -180235996 + AluSg SINE Alu 1 285 -25 1681 141 6 70 chr2 73020587 73020723 -180235860 - AluJo SINE Alu -168 144 1 1788 212 35 28 chr2 73020902 73021188 -180235395 - MLT1C LTR MaLR -2 465 173 1939 159 10 3 chr2 73021188 73021478 -180235105 - AluJb SINE Alu -20 292 1 1788 212 35 28 chr2 73021478 73021653 -180234930 - MLT1C LTR MaLR -294 173 1 795 118 15 44 chr2 73021728 73021864 -180234719 + AluJo SINE Alu 2 133 -169 21 0 0 0 chr2 73021949 73021970 -180234613 + AT_rich Low_complexity Low_complexity 1 21 0 * 712 216 101 7 chr2 73021955 73022103 -180234480 + AluJo SINE Alu 120 281 -31 645 309 199 41 chr2 73022289 73022875 -180233708 + L2 LINE L2 1992 2484 -829 1792 68 85 92 chr2 73022875 73023168 -180233415 + AluY SINE Alu 2 292 -19 645 309 199 41 chr2 73023168 73023639 -180232944 + L2 LINE L2 2484 3311 -2 617 172 0 0 chr2 73023823 73023910 -180232673 + AluS SINE Alu 2 88 -225 2333 90 20 0 chr2 73023910 73024211 -180232372 + AluY SINE Alu 1 307 -4 1529 123 0 29 chr2 73024210 73024453 -180232130 + AluSc SINE Alu 74 309 0 * 21 0 0 0 chr2 73024874 73024895 -180231688 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 73025454 73025475 -180231108 + AT_rich Low_complexity Low_complexity 1 21 0 2150 84 17 30 chr2 73025555 73025853 -180230730 + AluSx SINE Alu 1 294 -18 231 61 0 0 chr2 73026941 73026974 -180229609 + (T)n Simple_repeat Simple_repeat 1 33 0 2158 143 0 0 chr2 73027664 73027958 -180228625 + AluSx SINE Alu 1 294 -18 1979 170 0 16 chr2 73027967 73028284 -180228299 + AluJb SINE Alu 1 312 0 21 0 0 0 chr2 73030850 73030871 -180225712 + AT_rich Low_complexity Low_complexity 1 21 0 2063 142 0 0 chr2 73032318 73032613 -180223970 - AluSq SINE Alu -18 295 1 180 0 0 0 chr2 73032618 73032638 -180223945 + (A)n Simple_repeat Simple_repeat 1 20 0 2220 127 13 3 chr2 73032677 73032985 -180223598 - AluSx SINE Alu -1 311 1 732 318 71 16 chr2 73033184 73033552 -180223031 + HAL1 LINE L1 520 907 -1600 1391 142 113 47 chr2 73033618 73033753 -180222830 + AluSx SINE Alu 1 126 -176 1967 82 104 29 chr2 73033753 73034033 -180222550 + AluSx SINE Alu 1 301 -11 1305 178 18 98 chr2 73034035 73034372 -180222211 + AluJb SINE Alu 1 310 -2 1391 142 113 47 chr2 73034372 73034508 -180222075 + AluSx SINE Alu 126 293 -9 1609 170 55 4 chr2 73034512 73034810 -180221773 + AluSx SINE Alu 1 312 0 2164 131 0 13 chr2 73034814 73035120 -180221463 + AluSx SINE Alu 1 302 -10 365 276 98 52 chr2 73035127 73035301 -180221282 + HAL1 LINE L1 1082 1263 -1244 1009 101 0 36 chr2 73035324 73035462 -180221121 - AluSp/q SINE Alu -23 290 158 1163 156 0 0 chr2 73035472 73035652 -180220931 + HERVL18 LTR ERVL 2645 2824 -3223 1118 163 16 5 chr2 73035654 73035844 -180220739 - AluSq SINE Alu -121 192 1 2344 90 3 6 chr2 73035849 73036206 -180220377 - AluY SINE Alu 0 356 1 1261 154 0 51 chr2 73036210 73036401 -180220182 - AluJo SINE Alu -4 308 130 2429 79 0 0 chr2 73036401 73036691 -180219892 + AluSg SINE Alu 1 290 -20 1261 154 0 51 chr2 73036691 73036733 -180219850 - AluJo SINE Alu -182 130 87 23 54 0 0 chr2 73037735 73037772 -180218811 + AT_rich Low_complexity Low_complexity 1 37 0 1949 112 48 4 chr2 73037933 73038226 -180218357 - AluSg SINE Alu 0 305 1 1570 151 46 36 chr2 73038249 73038554 -180218029 - AluJb SINE Alu 0 312 5 23 0 0 0 chr2 73038559 73038582 -180218001 + AT_rich Low_complexity Low_complexity 1 23 0 730 186 8 0 chr2 73038582 73038700 -180217883 - FLAM_C SINE Alu -23 120 2 2328 109 0 10 chr2 73038711 73039022 -180217561 - AluSx SINE Alu -4 308 1 238 267 0 0 chr2 73039126 73039186 -180217397 + L2 LINE L2 2555 2614 -700 2188 132 7 0 chr2 73039218 73039514 -180217069 - AluSx SINE Alu -14 298 1 2410 96 0 0 chr2 73039593 73039896 -180216687 - AluY SINE Alu -8 303 1 1153 143 28 23 chr2 73040266 73040483 -180216100 - AluSg/x SINE Alu 0 312 95 15474 149 13 9 chr2 73040699 73042412 -180214171 + HERVL18 LTR ERVL 192 1988 -4059 2484 66 10 0 chr2 73042412 73042717 -180213866 + AluY SINE Alu 1 308 -3 15474 149 13 9 chr2 73042717 73043557 -180213026 + HERVL18 LTR ERVL 1988 2823 -3224 315 220 0 0 chr2 73043557 73043616 -180212967 - AluJ/FLAM SINE Alu -242 60 2 2468 72 3 0 chr2 73043665 73043971 -180212612 - AluY SINE Alu -4 307 1 206 316 0 11 chr2 73044002 73044097 -180212486 + T-rich Low_complexity Low_complexity 4 97 0 2147 53 27 4 chr2 73044121 73044383 -180212200 + AluY SINE Alu 31 298 -13 2185 115 3 3 chr2 73044701 73044996 -180211587 - AluSg SINE Alu -15 295 1 2126 131 20 0 chr2 73045672 73045978 -180210605 + AluSx SINE Alu 1 312 0 26 50 0 0 chr2 73046036 73046076 -180210507 + AT_rich Low_complexity Low_complexity 1 40 0 2087 137 6 16 chr2 73046082 73046395 -180210188 - AluSx SINE Alu -2 310 1 1346 197 131 0 chr2 73046420 73046679 -180209904 - AluJo SINE Alu -9 293 1 2232 92 7 16 chr2 73046706 73047009 -180209574 + AluSc SINE Alu 1 300 -9 4675 138 140 148 chr2 73047960 73049670 -180206913 - pTR5 LTR ERV1 0 2438 743 238 274 0 0 chr2 73049852 73049890 -180206693 - L2 LINE L2 -12 3301 3261 2303 82 3 44 chr2 73049890 73050207 -180206376 - AluSg SINE Alu -6 304 1 238 274 0 0 chr2 73050207 73050219 -180206364 - L2 LINE L2 -51 3262 3251 2455 78 3 3 chr2 73050796 73051103 -180205480 + AluSc SINE Alu 2 308 -1 2392 84 3 7 chr2 73052041 73052338 -180204245 - AluSx SINE Alu -16 296 1 2226 97 3 3 chr2 73052964 73053262 -180203321 - AluSp SINE Alu -15 298 1 258 306 0 0 chr2 73053400 73053462 -180203121 - MER5A DNA MER1_type 0 189 128 1889 94 0 58 chr2 73053671 73053947 -180202636 - AluSq SINE Alu -45 268 9 364 256 0 23 chr2 73053954 73054040 -180202543 - MER5A DNA MER1_type -85 104 21 197 181 194 14 chr2 73054387 73054459 -180202124 + MIR SINE MIR 46 130 -132 194 149 64 0 chr2 73055178 73055225 -180201358 + G-rich Low_complexity Low_complexity 4 53 0 441 341 16 16 chr2 73056345 73056527 -180200056 - MIR SINE MIR -10 252 71 2350 85 7 0 chr2 73057110 73057403 -180199180 + AluSc SINE Alu 2 296 -13 364 176 36 48 chr2 73057480 73057601 -180198982 + AluS SINE Alu 225 299 -1 1705 148 4 26 chr2 73057655 73057919 -180198664 + AluSx SINE Alu 44 301 -11 234 23 45 23 chr2 73057951 73057995 -180198588 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 1463 196 7 14 chr2 73057999 73058279 -180198304 - AluJo SINE Alu -34 278 1 1665 139 30 41 chr2 73058304 73058599 -180197984 + AluJb SINE Alu 1 292 -20 2462 65 10 13 chr2 73058682 73058815 -180197768 + AluSp SINE Alu 1 133 -180 2414 80 0 0 chr2 73058815 73059115 -180197468 + AluSg SINE Alu 1 300 -10 2462 65 10 13 chr2 73059115 73059288 -180197295 + AluSp SINE Alu 133 306 -7 181 194 32 0 chr2 73059302 73059333 -180197250 - L2 LINE L2 -99 3173 3142 581 214 45 0 chr2 73060242 73060354 -180196229 - L2 LINE L2 0 3313 3197 678 77 0 0 chr2 73060354 73060445 -180196138 - AluSx SINE Alu -4 306 216 1195 108 0 30 chr2 73060445 73060612 -180195971 - AluSx SINE Alu -150 162 1 306 171 8 171 chr2 73060615 73060732 -180195851 - L2 LINE L2 -109 3204 3107 2190 121 3 3 chr2 73060733 73061039 -180195544 + AluSc SINE Alu 1 306 -3 2473 84 7 0 chr2 73061125 73061433 -180195150 + AluSq SINE Alu 1 310 -3 2363 90 0 3 chr2 73062075 73062376 -180194207 + AluY SINE Alu 1 300 -11 1250 156 0 0 chr2 73062490 73062669 -180193914 + AluJo SINE Alu 1 179 -133 1989 138 11 0 chr2 73062677 73062960 -180193623 + AluJo SINE Alu 22 307 -5 1984 131 10 10 chr2 73062961 73063251 -180193332 + AluSx SINE Alu 3 292 -20 212 184 0 0 chr2 73063270 73063308 -180193275 + (TGAA)n Simple_repeat Simple_repeat 1 38 0 2355 74 17 0 chr2 73066460 73066757 -180189826 - AluSq SINE Alu -11 302 1 296 197 16 0 chr2 73066833 73066894 -180189689 - MIR SINE MIR -64 144 83 1894 140 18 0 chr2 73066905 73067190 -180189393 + AluJb SINE Alu 1 290 -22 591 299 22 5 chr2 73068282 73068466 -180188117 - MIR SINE MIR -74 188 2 2372 97 7 0 chr2 73068797 73069107 -180187476 - AluSq SINE Alu -1 312 1 2341 93 3 0 chr2 73069119 73069419 -180187164 - AluY SINE Alu -10 301 1 324 208 0 0 chr2 73069465 73069518 -180187065 + AluS SINE Alu 227 279 -21 189 0 0 0 chr2 73069526 73069547 -180187036 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 2118 121 10 3 chr2 73069592 73069889 -180186694 + AluSx SINE Alu 1 299 -13 474 245 113 13 chr2 73070035 73070186 -180186397 - L2 LINE L2 0 3313 3148 2265 117 3 3 chr2 73070291 73070599 -180185984 - AluSg SINE Alu -2 308 1 1851 146 10 10 chr2 73070602 73070904 -180185679 - AluJb SINE Alu -10 302 1 2215 116 3 3 chr2 73070972 73071266 -180185317 - AluSx SINE Alu -18 294 1 1682 100 22 0 chr2 73071373 73071603 -180184980 + AluSg SINE Alu 1 235 -75 1999 144 41 0 chr2 73071838 73072130 -180184453 - AluJb SINE Alu -8 304 1 607 254 86 20 chr2 73072492 73072689 -180183894 + L2 LINE L2 2421 2630 -684 1851 150 131 27 chr2 73072727 73073100 -180183483 + MLT1D LTR MaLR 28 439 -66 4830 119 28 14 chr2 73073101 73073916 -180182667 - SVA Other Other -1 1385 559 210 375 0 0 chr2 73073924 73074068 -180182515 + C-rich Low_complexity Low_complexity 1 144 0 210 207 0 0 chr2 73074081 73074139 -180182444 + C-rich Low_complexity Low_complexity 1 58 0 1035 228 22 40 chr2 73074307 73074583 -180182000 - L1M4 LINE L1 -5997 545 275 21 0 0 0 chr2 73074616 73074637 -180181946 + AT_rich Low_complexity Low_complexity 1 21 0 2013 122 0 7 chr2 73074646 73074949 -180181634 - AluSx SINE Alu -8 304 4 729 211 13 7 chr2 73074950 73075102 -180181481 - L1M4 LINE L1 -6376 166 14 742 275 55 17 chr2 73075114 73075350 -180181233 + L2 LINE L2 2817 3061 -252 1413 118 169 8 chr2 73075429 73075683 -180180900 - AluSg SINE Alu -5 295 1 23 0 0 0 chr2 73075687 73075710 -180180873 + AT_rich Low_complexity Low_complexity 1 23 0 1109 149 0 20 chr2 73075710 73075905 -180180678 - AluJ SINE Alu -2 310 120 2243 110 0 0 chr2 73076776 73077084 -180179499 - AluSx SINE Alu -4 308 1 554 155 0 31 chr2 73077084 73077170 -180179413 - AluJ SINE Alu -178 134 50 * 773 217 0 26 chr2 73077166 73077318 -180179265 - FAM SINE Alu -36 149 2 1884 146 7 3 chr2 73077346 73077654 -180178929 - AluSx SINE Alu -2 310 2 261 292 76 59 chr2 73078551 73078787 -180177796 - L2 LINE L2 -192 3080 2841 2240 87 3 3 chr2 73078853 73079153 -180177430 - AluSg SINE Alu -10 300 1 1724 166 7 7 chr2 73079157 73079515 -180177068 - AluJb SINE Alu 0 363 6 408 188 42 62 chr2 73080016 73080112 -180176471 + MER20 DNA MER1_type 1 94 -125 2171 101 0 7 chr2 73080472 73080779 -180175804 + AluSx SINE Alu 1 305 -7 578 191 19 0 chr2 73082133 73082238 -180174345 + AluSp/q SINE Alu 192 298 -15 358 261 38 31 chr2 73082239 73082376 -180174207 - MER5A DNA MER1_type -30 159 6 447 225 132 16 chr2 73082693 73082822 -180173761 - MER5B DNA MER1_type -32 146 3 371 148 16 0 chr2 73083149 73083210 -180173373 - MER5B DNA MER1_type 0 178 117 1325 129 29 14 chr2 73083375 73083585 -180172998 + AluJb SINE Alu 82 294 -18 2008 97 7 48 chr2 73083971 73084281 -180172302 + AluSc SINE Alu 1 297 -12 723 128 94 8 chr2 73084290 73084407 -180172176 + AluSx SINE Alu 2 128 -184 1524 167 7 3 chr2 73084670 73084957 -180171626 + AluSx SINE Alu 14 301 -11 817 194 65 7 chr2 73084957 73085112 -180171471 + AluSx SINE Alu 134 297 -15 248 260 13 0 chr2 73085113 73085190 -180171393 + L1M4 LINE L1 4789 4866 -1280 * 269 176 162 0 chr2 73085183 73085251 -180171332 + L1M4 LINE L1 2495 2573 -3573 1893 183 19 24 chr2 73085270 73085483 -180171100 - MLT1B LTR MaLR 0 390 178 1784 83 44 8 chr2 73085483 73085735 -180170848 - AluSp SINE Alu -11 302 42 1893 183 19 24 chr2 73085735 73085899 -180170684 - MLT1B LTR MaLR -212 178 15 428 314 43 48 chr2 73085903 73086113 -180170470 - L2 LINE L2 -482 2832 2624 515 87 0 0 chr2 73086113 73086182 -180170401 - MLT1D LTR MaLR 0 505 437 2123 90 3 3 chr2 73086183 73086473 -180170110 + AluSg1 SINE Alu 1 290 -19 1148 86 38 14 chr2 73086476 73086686 -180169897 + SVA Other Other 19 233 -1153 1219 124 16 0 chr2 73086874 73087067 -180169516 + AluSg/x SINE Alu 112 307 -5 632 240 88 0 chr2 73087394 73087565 -180169018 - MER5A DNA MER1_type 0 189 4 1953 105 28 7 chr2 73088895 73089180 -180167403 - AluSx SINE Alu -21 291 1 2213 62 16 23 chr2 73089780 73090089 -180166494 + AluSp SINE Alu 5 311 -2 400 220 178 0 chr2 73090486 73090604 -180165979 + L2 LINE L2 3175 3313 0 1701 171 3 7 chr2 73090741 73091040 -180165543 + AluJb SINE Alu 1 298 -14 932 189 12 0 chr2 73091131 73091295 -180165288 - FAM SINE Alu -9 166 1 1908 157 0 6 chr2 73091335 73091648 -180164935 - AluJb SINE Alu -1 311 1 2205 178 96 9 chr2 73091828 73092256 -180164327 + Tigger7 DNA MER2_type 59 523 -1964 2031 108 0 0 chr2 73092256 73092534 -180164049 + AluSg SINE Alu 1 278 -32 1636 145 74 7 chr2 73092923 73093192 -180163391 - AluJo SINE Alu -25 287 1 352 294 189 26 chr2 73094591 73094744 -180161839 + MER5A DNA MER1_type 12 189 0 259 263 119 42 chr2 73095270 73095388 -180161195 - MIR SINE MIR -25 237 111 864 121 0 15 chr2 73095390 73095522 -180161061 - FLAM_C SINE Alu -10 133 4 244 368 9 19 chr2 73095527 73095633 -180160950 - MIR SINE MIR -155 107 3 2220 78 0 10 chr2 73095921 73096217 -180160366 - AluY SINE Alu -18 293 1 1807 143 11 0 chr2 73096498 73096785 -180159798 + AluJb SINE Alu 5 294 -18 714 143 7 57 chr2 73096971 73097111 -180159472 - FLAM_C SINE Alu 0 133 1 28 61 0 0 chr2 73097479 73097528 -180159055 + AT_rich Low_complexity Low_complexity 1 49 0 2074 71 0 80 chr2 73097668 73097979 -180158604 + AluSp SINE Alu 1 286 -27 405 0 0 0 chr2 73097979 73098024 -180158559 + (CA)n Simple_repeat Simple_repeat 2 46 0 333 274 48 24 chr2 73098086 73098210 -180158373 - MIR SINE MIR -70 192 66 616 189 20 54 chr2 73098395 73098543 -180158040 - MER20 DNA MER1_type 0 219 77 2328 47 7 0 chr2 73098913 73099209 -180157374 - AluY SINE Alu -13 298 1 2169 76 3 7 chr2 73099322 73099612 -180156971 - AluSq SINE Alu -24 289 1 2376 50 0 3 chr2 73100911 73101209 -180155374 - AluY SINE Alu -14 297 1 209 30 61 0 chr2 73101241 73101274 -180155309 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 538 52 39 26 chr2 73101301 73101378 -180155205 + AluJo SINE Alu 58 135 -177 2274 56 0 0 chr2 73101531 73101819 -180154764 - AluY SINE Alu -23 288 1 1623 163 21 0 chr2 73101985 73102267 -180154316 - AluJo SINE Alu -22 290 3 264 294 0 0 chr2 73104486 73104554 -180152029 - MIR SINE MIR -12 250 183 1656 144 6 50 chr2 73104584 73104903 -180151680 - AluJb SINE Alu -7 305 1 2296 75 0 10 chr2 73105056 73105349 -180151234 - AluSp SINE Alu -14 299 10 712 166 55 28 chr2 73105381 73105526 -180151057 - L2 LINE L2 -3 3310 3162 * 1428 261 104 0 chr2 73105522 73105974 -180150609 - L2 LINE L2 -1001 2313 1815 2424 72 0 0 chr2 73106552 73106859 -180149724 - AluY SINE Alu -1 310 4 2129 88 10 7 chr2 73106866 73107161 -180149422 - AluSq SINE Alu -17 296 1 2079 93 7 3 chr2 73107296 73107587 -180148996 - AluSc SINE Alu -17 292 1 22 56 0 0 chr2 73108979 73109015 -180147568 + GC_rich Low_complexity Low_complexity 1 36 0 1063 183 137 88 chr2 73109237 73109325 -180147258 - L1ME2 LINE L1 0 6164 6082 2113 107 0 3 chr2 73109325 73109623 -180146960 + AluSx SINE Alu 2 298 -14 1063 183 137 88 chr2 73109623 73109893 -180146690 - L1ME2 LINE L1 -82 6082 5777 1812 139 3 7 chr2 73109893 73110188 -180146395 - AluSx SINE Alu -18 294 1 1063 183 137 88 chr2 73110188 73110281 -180146302 - L1ME2 LINE L1 -387 5777 5690 691 168 42 0 chr2 73110285 73110404 -180146179 - FLAM_C SINE Alu -11 132 9 501 172 11 0 chr2 73110416 73110503 -180146080 - L1ME2 LINE L1 -477 5687 5600 2086 101 3 29 chr2 73111118 73111425 -180145158 + AluSq SINE Alu 5 303 -10 378 42 0 0 chr2 73111428 73111476 -180145107 + (CAAG)n Simple_repeat Simple_repeat 2 49 0 711 262 44 49 chr2 73111619 73111844 -180144739 - MIR SINE MIR -7 255 32 1897 138 6 10 chr2 73112126 73112474 -180144109 + AluSx SINE Alu 1 347 0 2040 107 13 13 chr2 73113211 73113510 -180143073 + AluSx SINE Alu 1 299 -13 35 24 0 0 chr2 73113602 73113644 -180142939 + AT_rich Low_complexity Low_complexity 1 42 0 195 278 70 70 chr2 73113679 73113794 -180142789 + L2 LINE L2 2531 2645 -669 2018 128 0 0 chr2 73113802 73114090 -180142493 + AluSx SINE Alu 9 296 -16 225 0 0 0 chr2 73114134 73114159 -180142424 + (TA)n Simple_repeat Simple_repeat 1 25 0 288 0 0 0 chr2 73114166 73114198 -180142385 + (TTAAA)n Simple_repeat Simple_repeat 1 32 0 2094 86 7 3 chr2 73114198 73114482 -180142101 - AluSg SINE Alu -22 288 1 325 259 75 0 chr2 73114493 73114667 -180141916 - L1ME2 LINE L1 -872 5274 5088 1783 160 0 0 chr2 73114676 73114969 -180141614 + AluJo SINE Alu 1 293 -19 2143 95 0 0 chr2 73115028 73115343 -180141240 + AluSx SINE Alu 1 315 0 2122 119 3 3 chr2 73115347 73115659 -180140924 + AluSx SINE Alu 1 312 0 23 0 0 0 chr2 73115659 73115682 -180140901 + AT_rich Low_complexity Low_complexity 1 23 0 557 215 91 62 chr2 73115707 73115838 -180140745 - L1ME2 LINE L1 -3129 3017 2891 342 98 0 0 chr2 73115838 73115889 -180140694 + (CA)n Simple_repeat Simple_repeat 2 52 0 1649 157 14 11 chr2 73115895 73116182 -180140401 - AluJb SINE Alu -24 288 1 557 215 91 62 chr2 73116182 73116317 -180140266 - L1ME2 LINE L1 -3259 2887 2736 2069 116 3 0 chr2 73116345 73116638 -180139945 - AluSg SINE Alu -16 294 1 409 302 149 37 chr2 73116643 73116885 -180139698 + L2 LINE L2 3024 3292 -21 198 0 0 0 chr2 73117005 73117027 -180139556 + (ATTG)n Simple_repeat Simple_repeat 2 23 0 952 151 0 0 chr2 73117027 73117179 -180139404 - AluSg/x SINE Alu -26 286 135 276 213 107 40 chr2 73117226 73117301 -180139282 - MLT1J LTR MaLR -56 455 376 330 250 167 8 chr2 73117357 73117418 -180139165 - L1ME4a LINE L1 -127 5994 5944 2237 80 3 3 chr2 73117418 73117717 -180138866 + AluSc SINE Alu 1 299 -10 330 250 167 8 chr2 73117717 73117787 -180138796 - L1ME4a LINE L1 -177 5944 5842 279 224 0 17 chr2 73118571 73118629 -180137954 - MER3 DNA MER1_type 0 209 153 718 223 0 0 chr2 73118638 73118768 -180137815 + FLAM_C SINE Alu 4 133 -10 2136 126 0 0 chr2 73118774 73119076 -180137507 + AluSx SINE Alu 1 302 -10 2089 93 11 0 chr2 73119079 73119382 -180137201 + AluSg SINE Alu 1 306 0 608 164 104 8 chr2 73119385 73119519 -180137064 - MER3 DNA MER1_type -57 152 6 24 53 0 0 chr2 73119881 73119919 -180136664 + AT_rich Low_complexity Low_complexity 1 38 0 2000 123 0 23 chr2 73120009 73120145 -180136438 + AluSg SINE Alu 2 140 -170 2044 100 0 27 chr2 73120145 73120446 -180136137 + AluSg SINE Alu 1 293 -17 2000 123 0 23 chr2 73120446 73120619 -180135964 + AluSg SINE Alu 140 304 -6 2301 97 0 3 chr2 73120629 73120938 -180135645 + AluSg SINE Alu 1 308 -2 657 203 0 53 chr2 73120942 73121042 -180135541 - FLAM_C SINE Alu -185 127 34 2353 92 109 0 chr2 73121042 73121380 -180135203 + MER51B LTR ERV1 1 375 -2 657 203 0 53 chr2 73121380 73121412 -180135171 - FLAM_C SINE Alu -278 34 2 217 358 110 0 chr2 73121753 73121862 -180134721 - MIR SINE MIR -14 248 128 370 104 31 125 chr2 73121866 73121920 -180134663 - MER92B LTR ERV1 -8 628 585 577 230 0 52 chr2 73121920 73122055 -180134528 + FLAM_A SINE Alu 1 128 -5 370 104 31 125 chr2 73122055 73122096 -180134487 - MER92B LTR ERV1 -51 585 542 2486 199 41 44 chr2 73122203 73122306 -180134277 - MER92B LTR ERV1 -51 585 483 1956 127 3 34 chr2 73122306 73122628 -180133955 - AluSx SINE Alu 0 312 1 2486 199 41 44 chr2 73122628 73123111 -180133472 - MER92B LTR ERV1 -153 483 1 208 236 45 62 chr2 73123126 73123229 -180133354 - MIR SINE MIR -95 113 15 1305 175 104 0 chr2 73123410 73123650 -180132933 - AluJo SINE Alu -15 297 33 249 188 130 29 chr2 73123650 73123719 -180132864 - MER112 DNA MER1_type -180 80 5 307 267 70 12 chr2 73124271 73124357 -180132226 + MIR3 SINE MIR 87 177 -31 1275 167 137 4 chr2 73124844 73125107 -180131476 - AluJo SINE Alu -14 298 1 1545 217 117 35 chr2 73126029 73126320 -180130263 - MER89 LTR ERV1 -1 558 214 1975 139 0 0 chr2 73126320 73126623 -180129960 + AluSx SINE Alu 1 303 -9 1545 217 117 35 chr2 73126623 73126792 -180129791 - MER89 LTR ERV1 -345 214 60 995 234 68 0 chr2 73127505 73127727 -180128856 - MIR SINE MIR -24 238 2 2049 98 7 10 chr2 73127816 73127981 -180128602 - AluSx SINE Alu -13 299 134 2239 73 10 0 chr2 73127981 73128282 -180128301 - AluY SINE Alu -7 304 1 2049 98 7 10 chr2 73128282 73128412 -180128171 - AluSx SINE Alu -178 134 5 943 170 0 6 chr2 73128657 73128822 -180127761 + FRAM SINE Alu 1 164 -12 824 208 0 0 chr2 73128822 73128966 -180127617 - AluJo SINE Alu -82 230 87 1982 134 0 3 chr2 73128981 73129279 -180127304 - AluSx SINE Alu 0 312 16 365 385 39 8 chr2 73129469 73129703 -180126880 - L2 LINE L2 -2926 388 148 405 291 105 81 chr2 73130024 73130443 -180126140 - MLT1K LTR MaLR -36 552 124 2155 124 0 0 chr2 73130784 73131091 -180125492 + AluSq SINE Alu 1 307 -6 1834 162 3 0 chr2 73131181 73131477 -180125106 + AluJb SINE Alu 1 297 -15 363 294 114 38 chr2 73131495 73131679 -180124904 + L1ME4a LINE L1 3682 3879 -2267 434 305 109 40 chr2 73131679 73132066 -180124517 + L2 LINE L2 2682 3092 -180 362 198 143 0 chr2 73132092 73132183 -180124400 - MER5A DNA MER1_type -77 112 9 2234 88 3 25 chr2 73132223 73132402 -180124181 - AluSp SINE Alu -3 310 129 315 0 0 0 chr2 73132402 73132437 -180124146 + (TA)n Simple_repeat Simple_repeat 2 36 0 2080 101 0 0 chr2 73132440 73132718 -180123865 - AluSc SINE Alu -31 278 1 2234 88 3 25 chr2 73132718 73132851 -180123732 - AluSp SINE Alu -186 127 1 684 219 12 44 chr2 73132865 73133025 -180123558 + L2 LINE L2 3159 3313 0 339 290 89 24 chr2 73133025 73133149 -180123434 + L1ME4a LINE L1 3880 4011 -2135 313 306 131 39 chr2 73133146 73133352 -180123231 + L1ME4a LINE L1 4724 4948 -1198 * 238 270 216 30 chr2 73133369 73133651 -180122932 + L1ME4a LINE L1 4990 5345 -801 1956 91 3 79 chr2 73133651 73133980 -180122603 + AluSc SINE Alu 1 304 -5 238 270 216 30 chr2 73133980 73134030 -180122553 + L1ME4a LINE L1 5345 5384 -762 1226 182 47 81 chr2 73134033 73134431 -180122152 + MLT1B LTR MaLR 6 390 0 400 322 81 41 chr2 73134434 73134950 -180121633 + L1ME4a LINE L1 5381 5917 -204 2018 88 14 21 chr2 73135123 73135247 -180121336 + AluSx SINE Alu 15 138 -174 2491 39 3 3 chr2 73135247 73135555 -180121028 + AluY SINE Alu 3 310 -1 2018 88 14 21 chr2 73135555 73135714 -180120869 + AluSx SINE Alu 138 296 -16 1460 184 17 27 chr2 73136613 73136912 -180119671 - AluJo SINE Alu -16 296 1 291 98 0 0 chr2 73136921 73136962 -180119621 - MER82 DNA MER2_type -612 41 1 2422 50 3 0 chr2 73137011 73137312 -180119271 + AluY SINE Alu 1 302 -9 180 0 0 0 chr2 73137650 73137670 -180118913 + (A)n Simple_repeat Simple_repeat 1 20 0 305 206 82 55 chr2 73138621 73138694 -180117889 - L1M4 LINE L1 -1510 4636 4562 1975 134 0 0 chr2 73138699 73138989 -180117594 + AluSx SINE Alu 1 290 -22 582 180 0 94 chr2 73139021 73139149 -180117434 + AluJo SINE Alu 127 242 -70 2103 95 7 7 chr2 73139304 73139609 -180116974 - AluSq SINE Alu -8 305 1 411 252 147 0 chr2 73140524 73140667 -180115916 - MER20B DNA MER1_type -2 781 618 242 147 13 40 chr2 73140668 73140743 -180115840 + A-rich Low_complexity Low_complexity 5 77 0 390 264 93 16 chr2 73140756 73140885 -180115698 - MER90 LTR ERV1 0 575 437 1835 155 3 0 chr2 73140890 73141181 -180115402 - AluJb SINE Alu -20 292 1 629 330 100 64 chr2 73141184 73141224 -180115359 - L1M4 LINE L1 -985 5161 5124 1943 143 68 34 chr2 73141224 73141575 -180115008 + MLT1A1 LTR MaLR 3 365 0 629 330 100 64 chr2 73141575 73141675 -180114908 - L1M4 LINE L1 -1022 5124 5029 2189 96 0 0 chr2 73141675 73141967 -180114616 - AluSc SINE Alu -17 292 1 629 330 100 64 chr2 73141967 73142098 -180114485 - L1M4 LINE L1 -1117 5029 4904 2133 130 0 0 chr2 73142098 73142405 -180114178 - AluSx SINE Alu -5 307 1 629 330 100 64 chr2 73142405 73142613 -180113970 - L1M4 LINE L1 -1242 4904 4705 2204 54 7 0 chr2 73142613 73142940 -180113643 - AluY SINE Alu 0 329 1 1969 145 0 0 chr2 73142942 73143232 -180113351 - AluSx SINE Alu -22 290 1 629 330 100 64 chr2 73143232 73143354 -180113229 - L1M4 LINE L1 -1441 4705 4531 980 144 9 113 chr2 73143415 73143637 -180112946 + AluJo SINE Alu 102 300 -12 1988 117 7 0 chr2 73144120 73144410 -180112173 - AluSx SINE Alu -20 292 1 26 0 0 0 chr2 73144413 73144439 -180112144 + AT_rich Low_complexity Low_complexity 1 26 0 1647 146 9 53 chr2 73144440 73144561 -180112022 + AluJb SINE Alu 1 126 -186 252 59 0 0 chr2 73144561 73144595 -180111988 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1647 146 9 53 chr2 73144595 73144795 -180111788 + AluJb SINE Alu 126 308 -4 27 0 0 0 chr2 73145071 73145098 -180111485 + AT_rich Low_complexity Low_complexity 1 27 0 1943 139 0 0 chr2 73145098 73145386 -180111197 - AluSx SINE Alu -24 288 1 849 152 0 0 chr2 73145426 73145558 -180111025 + FLAM_C SINE Alu 7 138 -5 261 236 112 0 chr2 73145743 73145832 -180110751 + MIR3 SINE MIR 89 187 -21 273 217 0 0 chr2 73146664 73146747 -180109836 + (CA)n Simple_repeat Simple_repeat 1 83 0 388 56 56 0 chr2 73146920 73146974 -180109609 - Alu SINE Alu -2 300 244 777 143 8 16 chr2 73147000 73147126 -180109457 - FLAM_C SINE Alu -17 126 2 423 259 129 14 chr2 73147163 73147302 -180109281 - MER5A DNA MER1_type 0 189 35 280 225 175 33 chr2 73147202 73147322 -180109261 + MER5A DNA MER1_type 50 186 -3 * 440 175 124 93 chr2 73147637 73147831 -180108752 + MER112 DNA MER1_type 25 224 -36 594 217 48 36 chr2 73147832 73147998 -180108585 - MLT1G1 LTR MaLR -5 537 370 597 212 252 15 chr2 73148028 73148288 -180108295 - MLT1G1 LTR MaLR -294 296 1 426 274 159 9 chr2 73148811 73149151 -180107432 - L2 LINE L2 -1113 2201 1811 1953 114 13 13 chr2 73149283 73149589 -180106994 + AluSx SINE Alu 1 306 -6 302 220 44 77 chr2 73150270 73150361 -180106222 + MIR SINE MIR 63 150 -112 2002 110 28 3 chr2 73150433 73150715 -180105868 - AluSx SINE Alu -23 289 1 217 340 35 56 chr2 73151241 73151385 -180105198 + L2 LINE L2 3125 3265 -7 201 74 0 0 chr2 73151395 73151422 -180105161 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 2355 81 3 3 chr2 73152135 73152443 -180104140 - AluSp SINE Alu -5 308 1 673 281 119 8 chr2 73152774 73153027 -180103556 + LTR33 LTR ERVL 218 498 -23 1545 147 71 0 chr2 73153152 73153418 -180103165 - AluJo SINE Alu -27 285 1 583 155 10 19 chr2 73154013 73154116 -180102467 + Tigger5 DNA MER2_type 3 104 -2219 1701 134 11 0 chr2 73154370 73154632 -180101951 + Tigger5 DNA MER2_type 2058 2322 -1 2965 158 14 14 chr2 73154781 73155273 -180101310 - MLT1D LTR MaLR -13 492 1 1482 216 96 42 chr2 73155700 73156177 -180100406 + L1ME3A LINE L1 5668 6170 0 272 256 160 45 chr2 73156243 73156293 -180100290 + L1ME4a LINE L1 4462 4505 -1641 1741 198 84 5 chr2 73156293 73156633 -180099950 + MLT2D LTR ERVL 2 377 -37 414 39 0 0 chr2 73156633 73156685 -180099898 + (CA)n Simple_repeat Simple_repeat 2 53 0 1741 198 84 5 chr2 73156685 73156727 -180099856 + MLT2D LTR ERVL 377 414 0 272 256 160 45 chr2 73156727 73156832 -180099751 + L1ME4a LINE L1 4505 4635 -1511 5313 151 26 38 chr2 73156978 73157113 -180099470 - L1MA9 LINE L1 -5 6307 6172 276 100 0 0 chr2 73157113 73157153 -180099430 + (TG)n Simple_repeat Simple_repeat 1 40 0 5313 151 26 38 chr2 73157153 73157960 -180098623 - L1MA9 LINE L1 -140 6172 5386 737 171 31 8 chr2 73157960 73158089 -180098494 - FLAM_A SINE Alu -1 132 1 5313 151 26 38 chr2 73158089 73158612 -180097971 - L1MA9 LINE L1 -926 5386 4859 606 284 83 57 chr2 73158678 73158952 -180097631 + L1ME4a LINE L1 4878 5144 -1116 1942 124 28 0 chr2 73158952 73159235 -180097348 + AluSq SINE Alu 1 291 -22 606 284 83 57 chr2 73159235 73159815 -180096768 + L1ME4a LINE L1 5144 5757 -503 237 196 0 0 chr2 73159867 73159923 -180096660 + CT-rich Low_complexity Low_complexity 2 57 0 356 183 14 14 chr2 73160096 73160167 -180096416 - L1MB7 LINE L1 0 6184 6114 1237 154 106 0 chr2 73160172 73160399 -180096184 + AluJb SINE Alu 38 288 -24 2435 58 0 7 chr2 73160493 73160801 -180095782 - AluY SINE Alu -5 306 1 944 216 33 5 chr2 73160804 73161017 -180095566 - MLT1C LTR MaLR -59 408 190 216 279 12 58 chr2 73161176 73161262 -180095321 + GA-rich Low_complexity Low_complexity 4 85 0 478 273 131 22 chr2 73163169 73163352 -180093231 + MLT1K LTR MaLR 39 241 -347 532 266 79 39 chr2 73163606 73163809 -180092774 + MLT1K LTR MaLR 378 588 0 531 341 28 36 chr2 73163950 73164199 -180092384 - MIR SINE MIR 0 262 16 248 355 66 16 chr2 73164363 73164484 -180092099 - MIR SINE MIR -77 185 59 302 224 184 0 chr2 73165473 73165571 -180091012 + L1ME4a LINE L1 5966 6081 -40 1665 164 3 20 chr2 73165610 73165903 -180090680 - AluJo SINE Alu -24 288 1 5355 20 7 0 chr2 73166151 73166755 -180089828 - L1PA3 LINE L1 0 6155 5548 542 306 98 33 chr2 73166908 73167304 -180089279 - L1ME LINE L1 -348 5773 5352 310 191 43 142 chr2 73167402 73167543 -180089040 - MLT1K LTR MaLR -346 242 116 2123 112 0 0 chr2 73168200 73168503 -180088080 - AluSx SINE Alu -9 303 1 342 287 75 14 chr2 73168638 73168920 -180087663 + L1ME4a LINE L1 5666 5964 -157 2094 100 7 3 chr2 73168966 73169255 -180087328 + AluSg SINE Alu 1 290 -20 368 230 14 129 chr2 73169413 73169458 -180087125 + L2 LINE L2 3150 3199 -73 1626 169 3 7 chr2 73169458 73169742 -180086841 - AluJo SINE Alu -29 283 1 368 230 14 129 chr2 73169742 73169835 -180086748 + L2 LINE L2 3199 3272 0 561 326 52 22 chr2 73170774 73171044 -180085539 - L2 LINE L2 -8 3305 3028 393 192 39 0 chr2 73171146 73171224 -180085359 - MER5A DNA MER1_type -100 89 9 684 210 33 72 chr2 73171240 73171421 -180085162 - MER5B DNA MER1_type 0 178 5 608 158 105 15 chr2 73171671 73171804 -180084779 - MLT1H LTR MaLR -317 232 88 797 157 8 0 chr2 73171816 73171937 -180084646 - FLAM_C SINE Alu -21 122 1 261 152 109 0 chr2 73171939 73171985 -180084598 - MLT1H LTR MaLR -444 105 55 2109 108 14 0 chr2 73172890 73173177 -180083406 - AluSx SINE Alu -21 291 1 1140 129 0 18 chr2 73173790 73173960 -180082623 - AluSg/x SINE Alu -11 299 133 722 200 35 174 chr2 73174223 73174533 -180082050 - MLT1A2 LTR MaLR -107 267 1 2417 151 32 64 chr2 73174732 73175234 -180081349 + MER66B LTR ERV1 1 486 0 1296 112 6 0 chr2 73175524 73175694 -180080889 + AluSx SINE Alu 1 171 -141 301 270 6 61 chr2 73176400 73176563 -180080020 - L1ME4a LINE L1 -9 6112 5959 1075 115 6 13 chr2 73176588 73176745 -180079838 - AluSg/x SINE Alu -20 292 137 2181 123 3 3 chr2 73176754 73177055 -180079528 - AluSq SINE Alu -12 301 1 1189 193 63 37 chr2 73177184 73177532 -180079051 - LTR37A LTR ERV1 -2 424 68 249 213 75 25 chr2 73177683 73177763 -180078820 + MIR3 SINE MIR 96 179 -29 1013 129 0 0 chr2 73177952 73178084 -180078499 + AluSx SINE Alu 1 132 -180 374 211 48 39 chr2 73178105 73178209 -180078374 - LTR37A LTR ERV1 -229 197 93 1106 148 0 37 chr2 73178210 73178399 -180078184 + AluSx SINE Alu 118 299 -11 1646 174 26 74 chr2 73178777 73179167 -180077416 - L1MB5 LINE L1 -8 6166 5796 2551 168 47 2 chr2 73179175 73179645 -180076938 - L1MB5 LINE L1 -1938 4208 3718 1507 181 39 89 chr2 73179723 73180159 -180076424 - MLT2D LTR ERVL 0 414 1 1602 79 5 15 chr2 73180688 73180890 -180075693 + AluSx SINE Alu 1 200 -112 2322 118 65 78 chr2 73180988 73181181 -180075402 + MSTC LTR MaLR 1 195 -233 2176 108 0 14 chr2 73181181 73181478 -180075105 - AluSq SINE Alu -18 295 3 2322 118 65 78 chr2 73181478 73181718 -180074865 + MSTC LTR MaLR 195 428 0 1757 145 10 38 chr2 73182184 73182474 -180074109 - AluJo SINE Alu -25 287 6 4218 138 26 28 chr2 73182491 73182970 -180073613 - L1MA9 LINE L1 -2 6310 5832 1698 199 0 0 chr2 73182970 73183261 -180073322 - AluJb SINE Alu -21 291 1 4218 138 26 28 chr2 73183261 73183308 -180073275 - L1MA9 LINE L1 -480 5832 5786 2063 134 3 0 chr2 73183308 73183598 -180072985 - AluSx SINE Alu -21 291 1 4218 138 26 28 chr2 73183598 73183832 -180072751 - L1MA9 LINE L1 -526 5786 5550 1889 136 7 36 chr2 73185146 73185448 -180071135 - AluJo SINE Alu -17 295 3 3510 154 102 79 chr2 73185461 73186352 -180070231 - L1MB8 LINE L1 -1 6177 5266 1635 182 0 18 chr2 73186352 73186638 -180069945 - AluJo SINE Alu -31 281 1 3555 188 44 54 chr2 73186701 73187257 -180069326 - L1MB5 LINE L1 -1 6173 5613 326 78 0 20 chr2 73187257 73187308 -180069275 + (CA)n Simple_repeat Simple_repeat 2 51 0 3555 188 44 54 chr2 73187308 73188055 -180068528 - L1MB5 LINE L1 -561 5613 4479 4889 153 32 31 chr2 73189740 73189850 -180066733 + MER4D LTR ERV1 1 109 -794 2979 93 37 9 chr2 73189850 73190282 -180066301 - MLT2A1 LTR ERVL 0 444 1 4889 153 32 31 chr2 73190282 73190300 -180066283 + MER4D LTR ERV1 109 125 -778 1652 140 207 11 chr2 73190300 73190658 -180065925 + MSTA LTR MaLR 1 428 0 4889 153 32 31 chr2 73190658 73191430 -180065153 + MER4D LTR ERV1 125 903 0 1835 150 7 26 chr2 73191558 73191865 -180064718 + AluJo SINE Alu 1 301 -11 1737 145 6 66 chr2 73192466 73192784 -180063799 - AluJo SINE Alu -13 299 1 2219 153 16 11 chr2 73193604 73193949 -180062634 + MLT1B LTR MaLR 1 418 -49 1853 138 58 0 chr2 73193949 73194225 -180062358 + AluJb SINE Alu 1 292 -20 2219 153 16 11 chr2 73194225 73194268 -180062315 + MLT1B LTR MaLR 418 459 -8 312 325 38 19 chr2 73194475 73194632 -180061951 + MIR3 SINE MIR 30 189 -19 547 266 80 30 chr2 73197028 73197227 -180059356 + MIR SINE MIR 2 210 -52 391 260 67 0 chr2 73197565 73197669 -180058914 - L2 LINE L2 -7 3306 3196 340 253 42 3 chr2 73198287 73198409 -180058174 + MIR SINE MIR 16 146 -62 423 301 78 6 chr2 73199550 73199716 -180056867 - MIR SINE MIR -72 190 13 943 157 7 9 chr2 73200194 73200498 -180056085 + MLT1A1 LTR MaLR 1 365 0 855 160 65 12 chr2 73200813 73201004 -180055579 + L1MC3 LINE L1 6953 7136 -649 1480 234 110 24 chr2 73201004 73201273 -180055310 - MLT1D LTR MaLR -3 502 258 6301 92 31 0 chr2 73201273 73202256 -180054327 - L1PA11 LINE L1 -5 6169 5170 1480 234 110 24 chr2 73202256 73202448 -180054135 - MLT1D LTR MaLR -247 258 1 1838 152 3 20 chr2 73202448 73202751 -180053832 + L1MC3 LINE L1 7129 7426 -359 2344 95 7 7 chr2 73203177 73203481 -180053102 + AluSx SINE Alu 1 304 -8 1357 237 107 16 chr2 73203551 73204054 -180052529 + MLT1G1 LTR MaLR 1 593 -2 388 307 120 55 chr2 73204160 73204635 -180051948 + L2 LINE L2 458 963 -2351 726 148 0 9 chr2 73204662 73204777 -180051806 - AluJb SINE Alu -21 291 178 540 302 49 4 chr2 73204778 73205003 -180051580 - MIR SINE MIR -13 249 15 232 341 37 0 chr2 73205840 73205922 -180050661 + L2 LINE L2 3188 3272 0 467 154 11 11 chr2 73206407 73206498 -180050085 - MER5B DNA MER1_type 0 178 88 642 191 0 0 chr2 73206498 73206603 -180049980 - FLAM_C SINE Alu -34 109 5 576 232 0 0 chr2 73206607 73206719 -180049864 + MER58B DNA MER1_type 223 334 -7 344 240 0 0 chr2 73206719 73206794 -180049789 + MER5B DNA MER1_type 104 178 0 1194 196 77 61 chr2 73206945 73207062 -180049521 - MER58B DNA MER1_type -2079 341 227 1922 158 0 0 chr2 73207062 73207341 -180049242 + AluJb SINE Alu 1 279 -33 342 115 0 0 chr2 73207343 73207395 -180049188 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 1194 196 77 61 chr2 73207395 73207586 -180048997 - MER58B DNA MER1_type -2193 227 25 871 249 67 8 chr2 73208185 73208438 -180048145 + MLT1L LTR MaLR 335 602 -13 183 181 28 97 chr2 73208597 73208669 -180047914 - L3 LINE CR1 -70 1507 1441 543 241 51 28 chr2 73208912 73209113 -180047470 - MLT1G LTR MaLR 0 590 273 1128 258 146 10 chr2 73209113 73209593 -180046990 + L2 LINE L2 2770 3308 -5 500 204 139 7 chr2 73209667 73209804 -180046779 + L1MB1 LINE L1 4341 4495 -1651 4578 199 112 7 chr2 73209912 73210960 -180045623 + L1PB1 LINE L1 6 1163 -5700 1401 173 20 0 chr2 73210966 73211214 -180045369 + L1PB1 LINE L1 1321 1573 -5290 * 3780 150 67 10 chr2 73211210 73212005 -180044578 + L1PB1 LINE L1 2323 3169 -3693 2753 125 68 70 chr2 73212005 73212534 -180044049 + LTR14B LTR ERVK 17 544 -64 8922 164 20 19 chr2 73212535 73213532 -180043051 + L1PB1 LINE L1 4087 5082 -1785 2397 88 0 10 chr2 73213532 73213839 -180042744 + AluSc SINE Alu 1 304 -5 8922 164 20 19 chr2 73213839 73214619 -180041964 + L1PB1 LINE L1 5082 5860 -1007 2317 97 0 0 chr2 73214619 73214929 -180041654 + AluSq SINE Alu 1 310 -3 8922 164 20 19 chr2 73214929 73215938 -180040645 + L1PB1 LINE L1 5860 6867 0 4340 163 72 7 chr2 73215925 73217506 -180039077 + L1MB1 LINE L1 4489 6157 -11 * 186 133 0 0 chr2 73217509 73217539 -180039044 + (TA)n Simple_repeat Simple_repeat 1 30 0 376 362 17 11 chr2 73217638 73217815 -180038768 + L3 LINE CR1 1136 1313 -264 231 212 30 30 chr2 73217845 73217911 -180038672 - Charlie7 DNA MER1_type -32 2580 2515 * 249 306 90 15 chr2 73217910 73218044 -180038539 - Charlie7 DNA MER1_type -2466 146 3 1191 279 36 22 chr2 73218286 73218734 -180037849 - LTR16B LTR ERVL -2 462 9 273 265 0 36 chr2 73219035 73219118 -180037465 + L3 LINE CR1 1369 1448 -129 202 325 36 0 chr2 73219255 73219338 -180037245 + MER5B DNA MER1_type 39 124 -54 182 189 0 0 chr2 73219370 73219407 -180037176 + L3 LINE CR1 1537 1573 -4 256 271 24 24 chr2 73219434 73219519 -180037064 + MIR SINE MIR 76 160 -102 890 122 0 50 chr2 73220171 73220310 -180036273 - FLAM_C SINE Alu -1 132 1 2537 203 119 111 chr2 73220882 73221490 -180035093 + Charlie7 DNA MER1_type 7 609 -2003 2119 145 0 3 chr2 73221490 73221800 -180034783 + AluSg SINE Alu 1 309 -1 2537 203 119 111 chr2 73221800 73222004 -180034579 + Charlie7 DNA MER1_type 609 810 -1802 1277 181 3 104 chr2 73222004 73222330 -180034253 - AluJb SINE Alu -19 293 1 2537 203 119 111 chr2 73222330 73222679 -180033904 + Charlie7 DNA MER1_type 810 1178 -1434 508 246 46 23 chr2 73222692 73222867 -180033716 + L1MCc LINE L1 36 214 -6209 779 244 61 28 chr2 73222877 73223090 -180033493 + L1MCc LINE L1 252 471 -5952 1489 220 134 7 chr2 73223266 73223924 -180032659 + L1MCc LINE L1 2614 3339 -3602 3384 234 100 13 chr2 73223933 73225051 -180031532 + Charlie7 DNA MER1_type 1163 2377 -235 2126 133 125 8 chr2 73225336 73225719 -180030864 - MSTA LTR MaLR 0 428 1 346 298 46 8 chr2 73225862 73225993 -180030590 - MIR SINE MIR -79 183 48 574 104 40 88 chr2 73227998 73228069 -180028514 + L1MA2 LINE L1 6186 6250 -54 997 163 17 0 chr2 73228069 73228247 -180028336 + L1PA8 LINE L1 5991 6171 -1 574 104 40 88 chr2 73228247 73228300 -180028283 + L1MA2 LINE L1 6250 6304 0 1134 157 16 5 chr2 73228490 73228675 -180027908 - MER5A DNA MER1_type 0 189 3 671 218 84 135 chr2 73228852 73229399 -180027184 - L1MC4a LINE L1 -1973 5835 5317 187 342 36 9 chr2 73229505 73229616 -180026967 + L3b LINE CR1 1121 1234 -349 1310 165 44 66 chr2 73229664 73230108 -180026475 - MSTD LTR MaLR -13 415 1 208 318 147 33 chr2 73230829 73231040 -180025543 + L2 LINE L2 2440 2674 -640 219 139 0 0 chr2 73231051 73231087 -180025496 + (TTCA)n Simple_repeat Simple_repeat 2 37 0 243 283 91 0 chr2 73231348 73231447 -180025136 + MLT1L LTR MaLR 91 198 -417 254 211 28 0 chr2 73231528 73231599 -180024984 - Charlie8 DNA MER1_type -2226 191 119 2240 128 0 3 chr2 73231835 73232148 -180024435 + AluSx SINE Alu 1 312 0 680 254 103 0 chr2 73233370 73233555 -180023028 - MIR SINE MIR -13 249 46 1728 77 24 0 chr2 73233958 73234204 -180022379 + L1MA2 LINE L1 6053 6304 0 240 35 0 0 chr2 73234209 73234238 -180022345 + (TA)n Simple_repeat Simple_repeat 2 30 0 443 249 71 33 chr2 73234247 73234580 -180022003 + L1M2 LINE L1 5211 5561 -655 612 230 129 46 chr2 73234617 73234683 -180021900 + MLT1L LTR MaLR 71 130 -485 1640 156 69 24 chr2 73234683 73234971 -180021612 + AluJb SINE Alu 1 301 -11 612 230 129 46 chr2 73234971 73235293 -180021290 + MLT1L LTR MaLR 130 597 -18 444 308 55 22 chr2 73235312 73235585 -180020998 + L1ME4a LINE L1 5605 5886 -235 2411 75 7 7 chr2 73235636 73235942 -180020641 - AluSx SINE Alu -6 306 1 370 303 86 70 chr2 73236007 73236436 -180020147 - Charlie8 DNA MER1_type -17 2400 1965 9615 17 2 0 chr2 73236451 73238134 -180018449 - L1PA2 LINE L1 -260 5895 4209 2097 32 0 0 chr2 73238134 73238378 -180018205 + L1PA2 LINE L1 5907 6155 0 891 121 13 0 chr2 73238378 73238532 -180018051 + ALR/Alpha Satellite centromeric 1 155 -26 2776 278 66 18 chr2 73238545 73239644 -180016939 - Charlie8 DNA MER1_type -454 1963 812 4509 181 48 44 chr2 73239787 73241111 -180015472 - L1MB7 LINE L1 -10 6174 4856 1032 20 0 91 chr2 73241111 73241308 -180015275 + (CCTAT)n Simple_repeat Simple_repeat 2 180 0 4509 181 48 44 chr2 73241308 73241360 -180015223 - L1MB7 LINE L1 -1328 4856 4806 1284 10 0 70 chr2 73241360 73241746 -180014837 + (CCTAT)n Simple_repeat Simple_repeat 1 359 0 279 79 0 0 chr2 73241746 73241784 -180014799 + (CCCTA)n Simple_repeat Simple_repeat 3 40 0 4509 181 48 44 chr2 73241784 73242487 -180014096 - L1MB7 LINE L1 -1377 4807 4089 839 237 98 14 chr2 73243139 73243354 -180013229 - MIR SINE MIR -28 234 2 691 294 64 38 chr2 73243858 73244437 -180012146 - L1MEc LINE L1 -3935 2461 1868 2198 107 3 0 chr2 73244453 73244751 -180011832 - AluY SINE Alu -12 299 1 233 146 55 0 chr2 73244780 73244835 -180011748 + (TTTAA)n Simple_repeat Simple_repeat 3 60 0 368 245 10 31 chr2 73244897 73244995 -180011588 + MIR SINE MIR 113 208 -54 364 230 93 56 chr2 73245747 73245908 -180010675 - MER5A DNA MER1_type -22 167 1 21 57 0 0 chr2 73247208 73247243 -180009340 + AT_rich Low_complexity Low_complexity 1 35 0 416 109 19 45 chr2 73247398 73247554 -180009029 + (TA)n Simple_repeat Simple_repeat 1 152 0 322 261 87 68 chr2 73247657 73247720 -180008863 - L1ME4a LINE L1 -202 5919 5859 1525 113 198 8 chr2 73247720 73247977 -180008606 - AluSg1 SINE Alu -3 306 1 322 261 87 68 chr2 73247977 73248120 -180008463 - L1ME4a LINE L1 -262 5859 5709 303 269 67 31 chr2 73248121 73248314 -180008269 + L1ME4a LINE L1 5526 5725 -396 860 148 7 0 chr2 73248436 73248571 -180008012 + FLAM_C SINE Alu 1 136 -7 402 256 17 11 chr2 73248580 73248760 -180007823 + L1ME3A LINE L1 5771 5951 -219 418 304 74 36 chr2 73249093 73249619 -180006964 + L1ME4a LINE L1 3603 4148 -1998 1726 223 53 11 chr2 73249714 73250150 -180006433 + MER97a DNA MER1_type? 15 468 -426 2686 243 42 13 chr2 73250912 73251091 -180005492 - L1ME3 LINE L1 -43 6119 5947 1666 133 40 90 chr2 73251091 73251445 -180005138 - MER44D DNA MER2_type -2 607 2 2686 243 42 13 chr2 73251445 73252103 -180004480 - L1ME3 LINE L1 -215 5947 5258 2467 77 3 7 chr2 73253710 73254020 -180002563 - AluSp SINE Alu -4 309 1 219 78 78 49 chr2 73254114 73254256 -180002327 + (TTATA)n Simple_repeat Simple_repeat 2 147 0 356 73 0 0 chr2 73254411 73254466 -180002117 + L1MA3 LINE L1 6251 6305 0 466 350 96 20 chr2 73255548 73255988 -180000595 + L1ME4a LINE L1 4748 5220 -926 328 198 47 0 chr2 73256023 73256109 -180000474 + L1MB4 LINE L1 6091 6180 0 863 276 18 45 chr2 73256229 73256628 -179999955 + L1ME4a LINE L1 5282 5665 -456 2354 86 13 0 chr2 73256628 73256932 -179999651 + AluSp SINE Alu 1 308 -5 863 276 18 45 chr2 73256932 73257043 -179999540 + L1ME4a LINE L1 5665 5778 -343 63 87 0 0 chr2 73257051 73257212 -179999371 + AT_rich Low_complexity Low_complexity 1 161 0 392 210 164 32 chr2 73257243 73257524 -179999059 + L1ME4a LINE L1 5793 6110 -11 201 316 0 0 chr2 73257840 73257897 -179998686 - MIR SINE MIR -57 151 95 24 0 0 0 chr2 73258091 73258115 -179998468 + AT_rich Low_complexity Low_complexity 1 24 0 374 202 192 10 chr2 73258319 73258423 -179998160 - L1MB7 LINE L1 -9 6175 6053 1850 138 29 42 chr2 73258485 73258796 -179997787 - AluJb SINE Alu 0 312 6 1556 159 179 0 chr2 73258887 73259195 -179997388 + MLT1A1 LTR MaLR 3 365 0 234 295 0 0 chr2 73261369 73261430 -179995153 + (TA)n Simple_repeat Simple_repeat 2 62 0 324 210 100 20 chr2 73262739 73262839 -179993744 + L1ME LINE L1 5323 5427 -694 823 278 156 9 chr2 73263615 73263942 -179992641 + L2 LINE L2 2273 2647 -667 2082 137 3 3 chr2 73264122 73264422 -179992161 + AluSx SINE Alu 1 300 -12 232 235 0 0 chr2 73264431 73264482 -179992101 + MER66A LTR ERV1 287 337 -141 2137 222 60 8 chr2 73264565 73265101 -179991482 - MER97b DNA MER1_type? -475 578 15 418 304 74 36 chr2 73265196 73265722 -179990861 - L1M4 LINE L1 -1998 4148 3603 402 256 17 11 chr2 73266055 73266235 -179990348 - L1ME3A LINE L1 -219 5951 5771 887 162 0 0 chr2 73266244 73266380 -179990203 - FLAM_C SINE Alu -7 136 1 501 261 105 2 chr2 73266396 73266605 -179989978 - L1ME3A LINE L1 -487 5755 5508 631 244 160 21 chr2 73266606 73266938 -179989645 - MLT1J1 LTR MaLR -24 422 45 593 209 78 16 chr2 73267795 73267986 -179988597 + MLT1F LTR MaLR 340 542 0 795 306 16 16 chr2 73268112 73268370 -179988213 - MIR SINE MIR 0 262 5 940 332 46 48 chr2 73268374 73268871 -179987712 - L3 LINE CR1 -530 1047 552 358 234 76 95 chr2 73269011 73269169 -179987414 - L3 LINE CR1 -1075 502 348 327 223 89 27 chr2 73270728 73270840 -179985743 + LTR67 LTR ERVL 436 554 -3 2057 81 4 0 chr2 73271190 73271448 -179985135 - AluSg SINE Alu -21 289 31 1600 179 58 3 chr2 73272410 73272701 -179983882 - AluJo SINE Alu -2 310 4 2335 73 3 3 chr2 73272715 73273004 -179983579 - AluY SINE Alu -22 289 1 272 246 49 8 chr2 73273032 73273154 -179983429 - L1ME4a LINE L1 -11 6110 5984 539 281 101 34 chr2 73273210 73273248 -179983335 - L1ME4a LINE L1 -257 5864 5830 2151 127 19 22 chr2 73273248 73273610 -179982973 - MER46B DNA MER2_type 0 236 1 539 281 101 34 chr2 73273610 73274084 -179982499 - L1ME4a LINE L1 -291 5830 5314 566 320 101 58 chr2 73274282 73274769 -179981814 - L1ME4a LINE L1 -1128 5018 4498 402 227 45 38 chr2 73274958 73275090 -179981493 + MIR3 SINE MIR 11 143 -65 497 255 125 0 chr2 73275695 73275851 -179980732 + MER5A DNA MER1_type 4 182 -7 699 226 48 30 chr2 73275873 73276041 -179980542 - MER5B DNA MER1_type -7 171 1 309 164 66 0 chr2 73278420 73278481 -179978102 - MIR SINE MIR -109 153 89 2220 190 91 13 chr2 73279852 73280315 -179976268 - MLT1D LTR MaLR 0 505 7 694 279 99 29 chr2 73280438 73280822 -179975761 - L1ME LINE L1 -456 5665 5255 635 150 45 45 chr2 73281669 73281802 -179974781 - L1MB1 LINE L1 -50 6118 5986 22 35 0 0 chr2 73282153 73282182 -179974401 + AT_rich Low_complexity Low_complexity 1 29 0 370 234 18 36 chr2 73282469 73282580 -179974003 + MIR SINE MIR 24 132 -130 987 302 74 16 chr2 73282672 73283192 -179973391 - L2 LINE L2 0 3313 2763 822 199 12 12 chr2 73284836 73285007 -179971576 + MER5B DNA MER1_type 3 173 -5 254 264 69 11 chr2 73285019 73285106 -179971477 - MER5B DNA MER1_type 0 178 87 255 279 93 0 chr2 73285151 73285237 -179971346 + MLT1I LTR MaLR 41 134 -275 384 172 182 0 chr2 73285339 73285438 -179971145 + MLT1I LTR MaLR 289 405 -4 909 253 86 3 chr2 73285841 73286135 -179970448 - MER33 DNA MER1_type -15 309 1 1599 153 13 71 chr2 73286701 73287079 -179969504 - L1 LINE L1 -856 5290 4935 451 144 127 51 chr2 73287055 73287173 -179969410 + L1MA8 LINE L1 6165 6291 0 * 1984 127 68 0 chr2 73288270 73288562 -179968021 - AluSx SINE Alu 0 312 1 574 209 12 58 chr2 73288751 73288923 -179967660 - MIR SINE MIR 0 262 99 2933 29 6 0 chr2 73288925 73289267 -179967316 + L1PA3 LINE L1 5552 5895 -260 474 296 86 70 chr2 73289282 73289711 -179966872 + Charlie8 DNA MER1_type 1965 2400 -17 2438 75 7 7 chr2 73289776 73290082 -179966501 + AluSx SINE Alu 1 306 -6 535 297 59 26 chr2 73290133 73290406 -179966177 - L1ME4a LINE L1 -235 5886 5605 762 235 136 70 chr2 73290425 73290747 -179965836 - MLT1L LTR MaLR -18 597 239 1638 156 69 24 chr2 73290747 73291035 -179965548 - AluJb SINE Alu -11 301 1 762 235 136 70 chr2 73291035 73291138 -179965445 - MLT1L LTR MaLR -376 239 144 500 244 45 33 chr2 73291138 73291471 -179965112 - L1M2 LINE L1 -653 5509 5211 240 35 0 0 chr2 73291480 73291509 -179965074 + (TA)n Simple_repeat Simple_repeat 1 29 0 1789 81 23 12 chr2 73291514 73291773 -179964810 - L1MA2 LINE L1 0 6304 6043 617 254 103 0 chr2 73292163 73292348 -179964235 + MIR SINE MIR 46 249 -13 2259 118 0 13 chr2 73293568 73293882 -179962701 - AluSx SINE Alu -2 310 1 278 211 28 0 chr2 73294118 73294189 -179962394 + Charlie8 DNA MER1_type 119 191 -2226 284 269 236 9 chr2 73294213 73294425 -179962158 - MLT1L LTR MaLR -333 282 23 219 139 0 0 chr2 73294630 73294666 -179961917 + (TGAA)n Simple_repeat Simple_repeat 2 37 0 1423 168 42 68 chr2 73295609 73296065 -179960518 + MSTD LTR MaLR 1 424 -4 824 217 77 145 chr2 73296318 73296945 -179959638 + L1MC4a LINE L1 5317 5901 -220 1145 157 16 5 chr2 73297042 73297227 -179959356 + MER5A DNA MER1_type 3 189 0 628 104 40 88 chr2 73297417 73297470 -179959113 - L1MA2 LINE L1 0 6304 6250 1218 84 17 17 chr2 73297470 73297648 -179958935 - L1PA10 LINE L1 0 6168 5991 628 104 40 88 chr2 73297648 73297719 -179958864 - L1MA2 LINE L1 -54 6250 6186 5139 184 52 25 chr2 73299680 73301001 -179955582 - L1MB7 LINE L1 -10 6174 4891 1620 0 0 0 chr2 73301001 73301214 -179955369 + (CTATT)n Simple_repeat Simple_repeat 1 213 0 216 0 0 0 chr2 73301215 73301239 -179955344 + (CATTC)n Simple_repeat Simple_repeat 1 24 0 5139 184 52 25 chr2 73301239 73301943 -179954640 - L1MB7 LINE L1 -1292 4892 4089 775 233 98 14 chr2 73302595 73302810 -179953773 - MIR SINE MIR -28 234 2 996 288 120 29 chr2 73303319 73303914 -179952669 - L1MEc LINE L1 -3935 2461 1771 2216 115 14 0 chr2 73303914 73304209 -179952374 - AluSx SINE Alu -13 299 1 996 288 120 29 chr2 73304209 73304419 -179952164 - L1MEc LINE L1 -4625 1771 1582 266 303 0 0 chr2 73304397 73304473 -179952110 + L1M4 LINE L1 3717 3792 -2354 * 363 96 0 0 chr2 73304514 73304566 -179952017 + (TCCA)n Simple_repeat Simple_repeat 1 52 0 588 287 61 39 chr2 73304568 73304878 -179951705 - L2 LINE L2 -24 3289 2973 21 57 0 0 chr2 73304927 73304962 -179951621 + AT_rich Low_complexity Low_complexity 1 35 0 231 314 14 0 chr2 73305028 73305098 -179951485 - MLT1K LTR MaLR 0 588 518 2113 125 0 0 chr2 73305098 73305407 -179951176 - AluSx SINE Alu 0 309 1 342 0 0 0 chr2 73306132 73306170 -179950413 + (TG)n Simple_repeat Simple_repeat 1 38 0 506 320 22 31 chr2 73306250 73306478 -179950105 + LTR16C LTR ERVL 260 485 -6 2162 12 8 0 chr2 73307437 73307681 -179948902 - L1PA2 LINE L1 0 6155 5910 2307 8 0 0 chr2 73307681 73307933 -179948650 + L1PA3 LINE L1 5609 5860 -295 222 333 80 29 chr2 73307952 73308090 -179948493 - L2 LINE L2 -219 3053 2909 229 338 76 29 chr2 73308193 73308403 -179948180 + Charlie8 DNA MER1_type 89 308 -2109 856 222 109 30 chr2 73308527 73308865 -179947718 - LTR33 LTR ERVL -138 383 19 1802 144 0 0 chr2 73310284 73310541 -179946042 + AluSx SINE Alu 37 293 -19 288 222 37 25 chr2 73310840 73310921 -179945662 - MER5B DNA MER1_type -25 153 72 2001 125 13 3 chr2 73311870 73312173 -179944410 + AluSc SINE Alu 1 306 -3 717 176 23 0 chr2 73312530 73312661 -179943922 + AluJo SINE Alu 1 134 -178 638 203 124 0 chr2 73312672 73312825 -179943758 - MER5A DNA MER1_type -15 174 3 189 0 0 0 chr2 73317002 73317023 -179939560 + (TGAG)n Simple_repeat Simple_repeat 3 23 0 244 232 168 21 chr2 73318367 73318462 -179938121 - MIR3 SINE MIR -10 198 90 2249 95 0 3 chr2 73318578 73318890 -179937693 + AluSx SINE Alu 1 311 0 210 163 23 0 chr2 73318895 73318938 -179937645 - MIR SINE MIR -84 124 81 186 287 32 32 chr2 73320252 73320346 -179936237 - MIR3 SINE MIR -8 200 107 589 88 0 0 chr2 73321459 73321539 -179935044 - MADE1 DNA Mariner 0 80 1 234 227 30 0 chr2 73323100 73323166 -179933417 - MER5B DNA MER1_type -102 76 9 2379 87 3 0 chr2 73323458 73323757 -179932826 - AluSq SINE Alu -13 300 1 180 0 0 0 chr2 73324911 73324931 -179931652 + (TTAGGG)n Simple_repeat Simple_repeat 3 22 0 340 271 8 45 chr2 73325212 73325345 -179931238 - MIR SINE MIR -37 225 98 766 209 13 6 chr2 73326040 73326198 -179930385 + MER5B DNA MER1_type 1 159 -19 629 214 35 7 chr2 73326756 73326901 -179929682 + MER3 DNA MER1_type 1 149 -60 306 306 63 9 chr2 73326948 73327059 -179929524 - MIR SINE MIR -50 212 96 482 293 53 53 chr2 73328417 73328680 -179927903 - Charlie8 DNA MER1_type -2140 277 15 648 335 20 0 chr2 73328969 73329214 -179927369 + MIR SINE MIR 13 262 0 257 301 30 16 chr2 73330099 73330290 -179926293 + MIR SINE MIR 8 262 0 368 133 0 0 chr2 73330299 73330359 -179926224 + MER116 DNA Mariner 14 73 -7 996 210 30 5 chr2 73330361 73330561 -179926022 + MER20 DNA MER1_type 4 208 -11 247 304 54 27 chr2 73330899 73331011 -179925572 - MER5A DNA MER1_type -58 131 17 200 261 47 74 chr2 73331232 73331361 -179925222 - MER5A DNA MER1_type -6 172 47 2251 61 10 32 chr2 73332149 73332459 -179924124 + AluY SINE Alu 9 311 0 237 161 89 0 chr2 73332505 73332561 -179924022 + L1ME4a LINE L1 5976 6036 -85 3706 80 24 28 chr2 73332582 73333120 -179923463 + L1PA10 LINE L1 5628 6163 -5 301 246 14 0 chr2 73333798 73333867 -179922716 + MIR SINE MIR 6 75 -187 3044 132 23 0 chr2 73334471 73334909 -179921674 + MER1A DNA MER1_type 82 529 0 392 231 112 14 chr2 73335030 73335173 -179921410 + MER5A DNA MER1_type 5 161 -28 225 0 0 0 chr2 73335228 73335253 -179921330 + (TTAA)n Simple_repeat Simple_repeat 3 27 0 1872 167 0 7 chr2 73335257 73335551 -179921032 - AluJb SINE Alu -20 292 1 233 135 0 0 chr2 73335551 73335588 -179920995 + MER5A DNA MER1_type 146 182 -7 193 245 0 21 chr2 73335951 73336045 -179920538 + GA-rich Low_complexity Low_complexity 1 92 0 242 317 0 39 chr2 73336069 73336173 -179920410 + GA-rich Low_complexity Low_complexity 4 103 0 307 308 17 0 chr2 73337864 73337981 -179918602 + CT-rich Low_complexity Low_complexity 2 120 0 312 310 48 7 chr2 73340080 73340225 -179916358 - MIR SINE MIR -64 198 48 324 0 0 0 chr2 73340884 73340920 -179915663 + (TG)n Simple_repeat Simple_repeat 2 37 0 415 313 50 35 chr2 73341198 73341418 -179915165 - MIR SINE MIR -37 225 2 243 0 0 0 chr2 73341995 73342022 -179914561 + (A)n Simple_repeat Simple_repeat 1 27 0 181 167 48 0 chr2 73342650 73342692 -179913891 - MIR SINE MIR -60 148 105 23 0 0 0 chr2 73342897 73342920 -179913663 + AT_rich Low_complexity Low_complexity 1 23 0 1271 232 125 22 chr2 73343404 73343805 -179912778 + MLT1J2 LTR MaLR 1 442 -8 364 337 89 57 chr2 73344877 73345385 -179911198 - HAL1b LINE L1 -480 868 345 333 278 131 65 chr2 73345421 73345788 -179910795 - HAL1 LINE L1 -1166 1341 951 477 298 61 6 chr2 73347260 73347441 -179909142 - L3 LINE CR1 -164 1413 1223 2343 163 125 38 chr2 73347460 73347957 -179908626 + MLT1F LTR MaLR 3 542 0 708 282 9 5 chr2 73348129 73348342 -179908241 - MIR SINE MIR -44 218 5 784 332 46 48 chr2 73348346 73348843 -179907740 - L3 LINE CR1 -530 1047 552 309 234 76 95 chr2 73348983 73349141 -179907442 - L3 LINE CR1 -1075 502 348 374 214 89 27 chr2 73350700 73350812 -179905771 + LTR67 LTR ERVL 436 554 -3 2089 81 4 0 chr2 73351162 73351420 -179905163 - AluSg SINE Alu -21 289 31 1593 179 58 3 chr2 73352382 73352673 -179903910 - AluJo SINE Alu -2 310 4 2370 73 3 3 chr2 73352687 73352976 -179903607 - AluY SINE Alu -22 289 1 316 246 49 8 chr2 73353004 73353126 -179903457 - L1ME4a LINE L1 -11 6110 5984 672 276 103 38 chr2 73353182 73353220 -179903363 - L1ME4a LINE L1 -257 5864 5830 2228 127 19 22 chr2 73353220 73353582 -179903001 - MER46B DNA MER2_type 0 236 1 672 276 103 38 chr2 73353582 73354095 -179902488 - L1ME4a LINE L1 -291 5830 5271 282 318 93 61 chr2 73354300 73354741 -179901842 - L1ME4a LINE L1 -1194 4952 4498 365 227 45 38 chr2 73354930 73355062 -179901521 + MIR3 SINE MIR 11 143 -65 458 255 125 0 chr2 73355667 73355823 -179900760 + MER5A DNA MER1_type 4 182 -7 632 226 48 30 chr2 73355845 73356013 -179900570 - MER5B DNA MER1_type -7 171 1 309 164 66 0 chr2 73358392 73358453 -179898130 - MIR SINE MIR -109 153 89 2220 190 91 13 chr2 73359823 73360286 -179896297 - MLT1D LTR MaLR 0 505 7 679 278 114 51 chr2 73360364 73360792 -179895791 - L1M2 LINE L1 -456 5665 5254 635 150 45 45 chr2 73361638 73361771 -179894812 - L1MB1 LINE L1 -50 6118 5986 22 35 0 0 chr2 73362122 73362151 -179894432 + AT_rich Low_complexity Low_complexity 1 29 0 370 234 18 36 chr2 73362438 73362549 -179894034 + MIR SINE MIR 24 132 -130 987 302 74 16 chr2 73362641 73363161 -179893422 - L2 LINE L2 0 3313 2763 822 199 12 12 chr2 73364805 73364976 -179891607 + MER5B DNA MER1_type 3 173 -5 254 264 69 11 chr2 73364988 73365075 -179891508 - MER5B DNA MER1_type 0 178 87 375 239 80 0 chr2 73365120 73365208 -179891375 + MLT1I LTR MaLR 41 135 -274 384 172 182 0 chr2 73365311 73365410 -179891173 + MLT1I LTR MaLR 289 405 -4 909 253 86 3 chr2 73365813 73366107 -179890476 - MER33 DNA MER1_type -15 309 1 1599 153 13 71 chr2 73366673 73367051 -179889532 - L1 LINE L1 -856 5290 4935 451 144 127 51 chr2 73367027 73367145 -179889438 + L1MA8 LINE L1 6165 6291 0 * 1984 127 68 0 chr2 73368243 73368535 -179888048 - AluSx SINE Alu 0 312 1 720 231 41 86 chr2 73368724 73368899 -179887684 - MIR SINE MIR 0 262 102 5236 23 2 7 chr2 73368899 73369506 -179887077 + L1PA4 LINE L1 5552 6155 0 720 231 41 86 chr2 73369506 73369599 -179886984 - MIR SINE MIR -160 102 6 225 148 0 19 chr2 73370030 73370047 -179886536 - LTR66 LTR ERVL -163 447 431 1868 158 13 0 chr2 73370047 73370350 -179886233 + AluJb SINE Alu 1 307 -5 225 148 0 19 chr2 73370350 73370386 -179886197 - LTR66 LTR ERVL -179 431 395 360 64 0 0 chr2 73370387 73370434 -179886149 + (CA)n Simple_repeat Simple_repeat 2 48 0 287 296 23 0 chr2 73370474 73370562 -179886021 + (CATATA)n Simple_repeat Simple_repeat 5 94 0 1063 189 66 20 chr2 73370762 73371006 -179885577 + MIR SINE MIR 8 262 0 218 286 14 14 chr2 73372360 73372430 -179884153 + MER5A DNA MER1_type 119 188 -1 993 198 55 5 chr2 73372540 73372757 -179883826 - MIR SINE MIR -6 256 29 347 260 103 7 chr2 73373326 73373472 -179883111 - L1ME4a LINE L1 -218 5903 5744 228 222 69 14 chr2 73373507 73373579 -179883004 - L1ME4a LINE L1 -454 5667 5592 2228 123 0 0 chr2 73374078 73374380 -179882203 + AluSq SINE Alu 1 302 -11 510 248 62 0 chr2 73374554 73374683 -179881900 + MER112 DNA MER1_type 83 219 -41 186 342 77 8 chr2 73374683 73374800 -179881783 - MIR3 SINE MIR -26 182 58 296 328 23 23 chr2 73376208 73376382 -179880201 - MER117 DNA MER1_type -9 188 15 910 158 0 0 chr2 73376774 73376907 -179879676 + FLAM_C SINE Alu 1 133 0 505 252 88 46 chr2 73377506 73377768 -179878815 + L1MC5 LINE L1 7645 7917 -44 360 0 0 0 chr2 73377806 73377846 -179878737 + (CA)n Simple_repeat Simple_repeat 2 41 0 28 33 0 49 chr2 73380310 73380371 -179876212 + AT_rich Low_complexity Low_complexity 1 58 0 2834 241 138 58 chr2 73380951 73381141 -179875442 - MER45C DNA AcHobo -628 953 780 599 122 9 9 chr2 73381141 73381248 -179875335 - L1MB4 LINE L1 0 6180 6074 2834 241 138 58 chr2 73381248 73381939 -179874644 - MER45C DNA AcHobo -801 780 1 199 245 245 20 chr2 73383006 73383104 -179873479 + MIR SINE MIR 89 208 -54 465 233 16 119 chr2 73383370 73383563 -179873020 - MIR SINE MIR -12 250 78 236 250 103 0 chr2 73384118 73384186 -179872397 - L3 LINE CR1 -70 1507 1433 484 309 107 0 chr2 73385792 73385960 -179870623 + MIR SINE MIR 6 191 -71 1256 142 5 0 chr2 73386238 73386442 -179870141 + AluSg/x SINE Alu 91 295 -17 405 345 72 5 chr2 73387308 73387502 -179869081 + MIR SINE MIR 56 262 0 2122 104 20 0 chr2 73387525 73387823 -179868760 - AluSg SINE Alu -1 309 6 263 319 44 11 chr2 73388234 73388325 -179868258 - L3b LINE CR1 -200 1383 1290 1885 136 3 3 chr2 73388341 73388628 -179867955 - AluSx SINE Alu -3 309 23 732 65 0 0 chr2 73388629 73388722 -179867861 - L1PA11 LINE L1 -12 6162 6070 368 212 81 50 chr2 73388735 73388834 -179867749 - L2 LINE L2 0 3313 3212 417 247 32 76 chr2 73391677 73391835 -179864748 + MER20B DNA MER1_type 1 151 -632 4079 150 39 46 chr2 73392925 73393712 -179862871 + L1MC2 LINE L1 5551 6332 -12 261 160 0 170 chr2 73394113 73394213 -179862370 + L1MC2 LINE L1 6147 6229 -115 550 262 97 24 chr2 73394938 73395144 -179861439 + L2 LINE L2 3089 3309 -4 564 323 150 14 chr2 73395380 73395891 -179860692 - L2 LINE L2 -247 3066 2487 1377 104 85 0 chr2 73396317 73396528 -179860055 + MER30 DNA MER1_type 1 229 -1 561 256 111 0 chr2 73397460 73397632 -179858951 - MER117 DNA MER1_type 0 197 7 1842 128 26 23 chr2 73398772 73399076 -179857507 - AluJb SINE Alu -6 306 2 182 267 83 17 chr2 73399912 73399972 -179856611 - L2 LINE L2 -9 3304 3241 586 246 76 67 chr2 73400834 73401087 -179855496 + MIR SINE MIR 5 261 -1 181 270 170 50 chr2 73401211 73401311 -179855272 + L2 LINE L2 3159 3270 -2 625 240 23 2 chr2 73402117 73402296 -179854287 + L1ME4a LINE L1 2436 2620 -3526 2060 206 9 4 chr2 73402297 73402758 -179853825 + L1ME4a LINE L1 2669 3131 -3015 14715 128 36 22 chr2 73402823 73405206 -179851377 + Tigger1 DNA MER2_type 1 2417 -1 2063 120 0 0 chr2 73405371 73405662 -179850921 - AluSx SINE Alu -13 299 9 577 283 92 87 chr2 73406255 73406690 -179849893 + L1ME4a LINE L1 4796 5232 -914 349 280 87 14 chr2 73406701 73406908 -179849675 + L1ME4a LINE L1 5271 5492 -629 323 317 73 24 chr2 73406929 73407352 -179849231 + L1ME4a LINE L1 5539 5982 -139 2101 82 0 11 chr2 73408769 73409050 -179847533 + AluSq SINE Alu 34 311 -2 2104 115 10 3 chr2 73409161 73409465 -179847118 + AluSx SINE Alu 1 306 -6 232 242 81 10 chr2 73409528 73409627 -179846956 + L1ME4a LINE L1 3359 3464 -2682 658 303 146 86 chr2 73409630 73410431 -179846152 + L1ME4a LINE L1 3511 4359 -1787 437 295 54 16 chr2 73410448 73410577 -179846006 + L2 LINE L2 3180 3313 0 2603 108 31 7 chr2 73410670 73411087 -179845496 + L1MA3 LINE L1 5879 6305 0 264 209 0 0 chr2 73411101 73411187 -179845396 + GA-rich Low_complexity Low_complexity 1 86 0 256 291 52 52 chr2 73411187 73411321 -179845262 - MIR SINE MIR -128 134 1 559 313 79 59 chr2 73411409 73412020 -179844563 + L1ME4a LINE L1 4880 5520 -745 886 140 23 29 chr2 73412217 73412388 -179844195 - L1PA16 LINE L1 0 6166 5997 949 127 89 0 chr2 73412411 73412568 -179844015 - AluJb SINE Alu -20 292 122 352 70 18 53 chr2 73412597 73412654 -179843929 - L1P3 LINE L1 -6404 57 3 777 136 0 0 chr2 73412659 73412769 -179843814 - FLAM_C SINE Alu -32 111 2 351 298 53 26 chr2 73412792 73413084 -179843499 - L1ME4a LINE L1 -396 5725 5526 406 265 88 54 chr2 73413085 73413228 -179843355 + L1ME4a LINE L1 5709 5863 -258 1433 115 196 8 chr2 73413228 73413488 -179843095 + AluSg1 SINE Alu 1 309 0 406 265 88 54 chr2 73413488 73413548 -179843035 + L1ME4a LINE L1 5863 5919 -202 416 109 19 45 chr2 73413651 73413807 -179842776 + (TA)n Simple_repeat Simple_repeat 1 152 0 21 57 0 0 chr2 73413962 73413997 -179842586 + AT_rich Low_complexity Low_complexity 1 35 0 399 230 93 56 chr2 73415297 73415458 -179841125 + MER5A DNA MER1_type 1 167 -22 373 222 10 40 chr2 73416201 73416300 -179840283 - MIR SINE MIR -46 216 121 233 146 55 0 chr2 73416370 73416425 -179840158 + (TTAAA)n Simple_repeat Simple_repeat 3 60 0 2265 41 10 14 chr2 73416454 73416778 -179839805 + AluY SINE Alu 1 323 0 518 213 228 0 chr2 73417007 73417143 -179839440 - MIR SINE MIR -17 245 79 554 250 40 45 chr2 73418076 73418252 -179838331 + MIR SINE MIR 88 262 0 2096 123 0 10 chr2 73421526 73421835 -179834748 + AluSx SINE Alu 1 306 -6 2769 3 0 6 chr2 73421840 73422153 -179834430 + AluYa5 SINE Alu 1 311 0 614 313 77 5 chr2 73422439 73422634 -179833949 - MIR SINE MIR -52 210 2 279 280 76 51 chr2 73422634 73422736 -179833847 + MIR SINE MIR 124 228 -34 1872 127 3 10 chr2 73425362 73425694 -179830889 + AluSx SINE Alu 1 312 0 236 304 0 51 chr2 73425975 73426054 -179830529 - L2 LINE L2 -5 3308 3234 314 281 96 52 chr2 73426072 73426207 -179830376 + HAL1b LINE L1 361 501 -847 263 288 0 0 chr2 73426408 73426474 -179830109 + MLT1L LTR MaLR 10 75 -540 497 311 78 9 chr2 73426508 73426727 -179829856 + MLT1L LTR MaLR 160 393 -222 555 16 0 0 chr2 73427008 73427072 -179829511 + (TTCC)n Simple_repeat Simple_repeat 1 64 0 1689 149 22 0 chr2 73427073 73427342 -179829241 - AluSx SINE Alu -37 275 1 330 343 47 47 chr2 73427393 73427690 -179828893 + L1ME3 LINE L1 2031 2327 -4069 284 302 58 40 chr2 73427905 73428147 -179828436 + MLT1H1 LTR MaLR 21 307 -242 376 238 12 0 chr2 73428215 73428299 -179828284 + MLT1H1 LTR MaLR 463 547 -8 1241 310 135 41 chr2 73428436 73428530 -179828053 + L1ME3 LINE L1 2747 2831 -3384 2141 85 68 0 chr2 73428530 73428811 -179827772 + AluSx SINE Alu 2 301 -11 1241 310 135 41 chr2 73428811 73429847 -179826736 + L1ME3 LINE L1 2831 3984 -2231 230 211 0 0 chr2 73430298 73430350 -179826233 - L1ME LINE L1 -541 5580 5529 303 258 126 31 chr2 73430693 73430852 -179825731 + L1ME4a LINE L1 5902 6075 -46 654 298 49 25 chr2 73431759 73432004 -179824579 + MIR SINE MIR 6 256 -6 2176 157 74 92 chr2 73432475 73433005 -179823578 + MLT2B1 LTR ERVL 1 520 0 3625 142 38 2 chr2 73433158 73433741 -179822842 - MER6A DNA MER2_type -1 604 1 2303 99 16 0 chr2 73434013 73434317 -179822266 + AluSc SINE Alu 1 309 0 212 244 0 0 chr2 73434407 73434452 -179822131 + CT-rich Low_complexity Low_complexity 2 46 0 360 0 0 0 chr2 73434723 73434763 -179821820 + (TG)n Simple_repeat Simple_repeat 2 41 0 665 251 12 18 chr2 73435133 73435304 -179821279 - MIR SINE MIR -65 197 28 238 324 81 0 chr2 73436597 73436708 -179819875 + L2 LINE L2 2985 3104 -168 188 339 0 0 chr2 73437397 73437456 -179819127 + L2 LINE L2 3255 3313 0 24 0 0 0 chr2 73437618 73437642 -179818941 + AT_rich Low_complexity Low_complexity 1 24 0 824 234 129 3 chr2 73438996 73439329 -179817254 + L1ME3 LINE L1 4297 4671 -1544 585 237 131 56 chr2 73439329 73439830 -179816753 + MLT1F LTR MaLR 46 595 0 3100 227 39 24 chr2 73439832 73440681 -179815902 + L1ME3 LINE L1 5137 6006 -225 1706 124 40 90 chr2 73440681 73441035 -179815548 + MER44D DNA MER2_type 2 607 -2 3100 227 39 24 chr2 73441035 73441264 -179815319 + L1ME3 LINE L1 6006 6230 -1 631 244 160 21 chr2 73441764 73442096 -179814487 + MLT1J1 LTR MaLR 45 422 -24 501 261 105 2 chr2 73442097 73442306 -179814277 + L1ME3A LINE L1 5508 5755 -487 887 162 0 0 chr2 73442322 73442458 -179814125 + FLAM_C SINE Alu 1 136 -7 402 256 17 11 chr2 73442467 73442647 -179813936 + L1ME3A LINE L1 5771 5951 -219 418 304 74 36 chr2 73442980 73443506 -179813077 + L1M4 LINE L1 3603 4148 -1998 2137 222 60 8 chr2 73443601 73444137 -179812446 + MER97b DNA MER1_type? 15 578 -475 232 235 0 0 chr2 73444220 73444271 -179812312 - MER66A LTR ERV1 -141 337 287 2082 137 3 3 chr2 73444280 73444580 -179812003 - AluSx SINE Alu -12 300 1 823 278 156 9 chr2 73444760 73445087 -179811496 - L2 LINE L2 -667 2647 2273 324 210 100 20 chr2 73445863 73445963 -179810620 - L1ME LINE L1 -694 5427 5323 234 295 0 0 chr2 73447272 73447333 -179809250 + (TA)n Simple_repeat Simple_repeat 2 62 0 1556 159 179 0 chr2 73449507 73449815 -179806768 - MLT1A1 LTR MaLR 0 365 3 1850 138 29 42 chr2 73449906 73450217 -179806366 + AluJb SINE Alu 6 312 0 374 202 192 10 chr2 73450279 73450383 -179806200 + L1MB7 LINE L1 6053 6175 -9 24 0 0 0 chr2 73450587 73450611 -179805972 + AT_rich Low_complexity Low_complexity 1 24 0 201 316 0 0 chr2 73450806 73450863 -179805720 + MIR SINE MIR 95 151 -57 392 210 164 32 chr2 73451179 73451460 -179805123 - L1ME4a LINE L1 -11 6110 5793 63 87 0 0 chr2 73451491 73451652 -179804931 + AT_rich Low_complexity Low_complexity 1 161 0 863 276 18 45 chr2 73451660 73451771 -179804812 - L1ME4a LINE L1 -343 5778 5665 2354 86 13 0 chr2 73451771 73452075 -179804508 - AluSp SINE Alu -5 308 1 863 276 18 45 chr2 73452075 73452474 -179804109 - L1ME4a LINE L1 -456 5665 5282 328 198 47 0 chr2 73452594 73452680 -179803903 - L1MB4 LINE L1 0 6180 6091 466 350 96 20 chr2 73452715 73453155 -179803428 - L1ME4a LINE L1 -926 5220 4748 356 73 0 0 chr2 73454237 73454292 -179802291 - L1MA3 LINE L1 0 6305 6251 219 78 78 49 chr2 73454447 73454589 -179801994 + (TATAA)n Simple_repeat Simple_repeat 2 147 0 2467 77 3 7 chr2 73454683 73454993 -179801590 + AluSp SINE Alu 1 309 -4 342 363 56 32 chr2 73455694 73456385 -179800198 - HERV16 LTR ERVL -4288 708 1 306 303 56 71 chr2 73456385 73456709 -179799874 - LTR16C LTR ERVL 0 491 173 1834 120 0 4 chr2 73456998 73457257 -179799326 + AluSx SINE Alu 47 304 -8 2028 144 13 0 chr2 73457432 73457730 -179798853 - AluSx SINE Alu -10 302 1 21 57 0 0 chr2 73457897 73457932 -179798651 + AT_rich Low_complexity Low_complexity 1 35 0 236 283 38 19 chr2 73457932 73458091 -179798492 - L1ME4a LINE L1 -3126 3020 2859 213 250 16 0 chr2 73459259 73459323 -179797260 + T-rich Low_complexity Low_complexity 2 66 0 243 299 22 22 chr2 73459498 73459632 -179796951 - LTR67 LTR ERVL -6 551 418 2249 75 4 0 chr2 73459780 73460058 -179796525 - AluSg SINE Alu -6 304 26 235 386 70 0 chr2 73460223 73460337 -179796246 - L2 LINE L2 -10 3262 3141 5393 50 13 0 chr2 73461139 73461815 -179794768 + L1PA8 LINE L1 5484 6168 -4 1117 115 4 64 chr2 73461815 73462049 -179794534 + L1MA9 LINE L1 6052 6271 -41 186 224 0 0 chr2 73463714 73463763 -179792820 + CT-rich Low_complexity Low_complexity 4 52 0 4898 216 66 51 chr2 73463896 73466359 -179790224 - L1MD1 LINE L1 0 6636 4211 228 67 0 0 chr2 73466359 73466389 -179790194 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 4898 216 66 51 chr2 73466389 73466414 -179790169 - L1MD1 LINE L1 -2425 4211 4188 600 52 0 0 chr2 73466414 73466491 -179790092 - L1PA5 LINE L1 -5 6149 6073 6628 36 1 0 chr2 73466491 73467273 -179789310 + L1PA5 LINE L1 5361 6146 -8 4898 216 66 51 chr2 73467273 73467587 -179788996 - L1MD1 LINE L1 -2447 4189 3796 571 164 9 3 chr2 73467616 73467848 -179788735 - AluJb SINE Alu -7 305 1 3505 196 58 17 chr2 73467850 73470157 -179786426 - L1MD1 LINE L1 -2796 3744 1533 207 0 0 0 chr2 73470157 73470180 -179786403 + (TA)n Simple_repeat Simple_repeat 2 24 0 2211 103 7 0 chr2 73470180 73470471 -179786112 - AluSc SINE Alu -16 293 1 3505 196 58 17 chr2 73470471 73470788 -179785795 - L1MD1 LINE L1 -5006 1534 967 939 155 6 12 chr2 73470787 73470941 -179785642 - L1MD1 LINE L1 -6362 178 24 * 1713 185 0 14 chr2 73470941 73471238 -179785345 - AluJb SINE Alu -19 293 1 1925 149 43 0 chr2 73471471 73471800 -179784783 + MER7A DNA MER2_type 6 346 0 515 306 73 53 chr2 73471800 73472251 -179784332 - L2 LINE L2 -779 2535 2076 369 292 44 15 chr2 73473818 73473955 -179782628 - MIR SINE MIR -75 187 47 185 250 0 23 chr2 73474176 73474220 -179782363 + L2 LINE L2 2928 2970 -344 404 229 0 9 chr2 73475534 73475643 -179780940 - L1M4 LINE L1 -1926 4220 4113 2283 85 3 3 chr2 73475777 73476072 -179780511 + AluSx SINE Alu 1 295 -17 516 249 57 20 chr2 73477909 73478154 -179778429 - L1ME4a LINE L1 -234 5887 5634 237 228 65 49 chr2 73480078 73480201 -179776382 + L1M4 LINE L1 4382 4506 -1640 338 308 101 92 chr2 73480429 73480884 -179775699 - L1MEd LINE L1 -5571 548 90 1732 207 28 6 chr2 73481306 73481663 -179774920 - MLT1A1 LTR MaLR 0 365 1 2146 93 40 0 chr2 73483775 73484053 -179772530 + AluSx SINE Alu 1 289 -23 375 283 41 0 chr2 73484568 73484713 -179771870 - L2 LINE L2 -305 3008 2858 285 266 37 9 chr2 73484992 73485101 -179771482 - L2 LINE L2 -1248 2066 1955 377 283 75 8 chr2 73485101 73485221 -179771362 + MER94 DNA DNA 2 129 -5 1235 255 150 16 chr2 73485221 73485782 -179770801 - L2 LINE L2 -1363 1951 1316 2513 181 36 75 chr2 73485785 73486422 -179770161 + LTR9 LTR ERV1 1 612 0 2111 70 39 8 chr2 73486465 73486813 -179769770 + LTR7 LTR ERV1 1 448 -2 24036 92 50 42 chr2 73486815 73490531 -179766052 + HERVH LTR ERV1 1 3746 -3967 1130 56 0 0 chr2 73490526 73490670 -179765913 + HERVH LTR ERV1 3850 3993 -3720 * 4401 144 3 1 chr2 73490672 73491333 -179765250 + HERVH LTR ERV1 4488 5149 -2564 1438 125 19 0 chr2 73491334 73491550 -179765033 + HERVH LTR ERV1 5600 5819 -1894 * 2350 106 56 13 chr2 73491548 73491924 -179764659 + HERVH LTR ERV1 7322 7713 0 2751 70 117 0 chr2 73491924 73492325 -179764258 + LTR7 LTR ERV1 1 448 -2 1058 237 128 30 chr2 73492405 73492810 -179763773 + L1MCc LINE L1 25 469 -5954 1029 272 57 66 chr2 73492846 73493456 -179763127 + L1MCc LINE L1 1982 2586 -4536 909 197 70 28 chr2 73493465 73493678 -179762905 - MER58A DNA MER1_type -2 222 1 1968 216 55 67 chr2 73493681 73494159 -179762424 + L1MCc LINE L1 2594 3076 -3865 4314 111 6 12 chr2 73494159 73494797 -179761786 - L1PA13 LINE L1 -5 6158 5525 1968 216 55 67 chr2 73494797 73495042 -179761541 + L1MCc LINE L1 3076 3322 -3619 2255 120 0 0 chr2 73495042 73495341 -179761242 + AluSx SINE Alu 1 299 -13 1968 216 55 67 chr2 73495341 73495661 -179760922 + L1MCc LINE L1 3322 3573 -3368 1938 285 112 9 chr2 73495670 73496431 -179760152 - L2 LINE L2 -2107 1207 369 984 227 171 77 chr2 73497262 73497999 -179758584 + HAL1 LINE L1 848 1653 -854 574 278 95 9 chr2 73498008 73498331 -179758252 + LTR16B LTR ERVL 1 378 -86 22 0 0 0 chr2 73499539 73499561 -179757022 + AT_rich Low_complexity Low_complexity 1 22 0 462 279 116 11 chr2 73499791 73499981 -179756602 + MIR SINE MIR 29 238 -24 743 240 64 0 chr2 73500121 73500292 -179756291 + MIR SINE MIR 34 215 -47 1462 148 94 0 chr2 73500354 73500610 -179755973 + MER7A DNA MER2_type 66 343 -3 5893 138 32 21 chr2 73500678 73501846 -179754737 + L1MA7 LINE L1 5114 6291 0 4650 251 92 49 chr2 73501920 73503534 -179753049 + HAL1 LINE L1 74 1771 -736 2056 86 0 66 chr2 73503534 73503897 -179752686 + AluY SINE Alu 1 343 0 4650 251 92 49 chr2 73503897 73504011 -179752572 + HAL1 LINE L1 1771 1879 -628 1951 249 45 61 chr2 73504090 73504181 -179752402 + HAL1 LINE L1 1694 1785 -722 243 0 0 0 chr2 73504181 73504208 -179752375 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1951 249 45 61 chr2 73504208 73504919 -179751664 + HAL1 LINE L1 1785 2483 -24 180 0 0 0 chr2 73505432 73505452 -179751131 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 865 190 6 19 chr2 73505458 73505616 -179750967 - FAM SINE Alu -24 161 6 252 295 143 0 chr2 73505794 73505906 -179750677 - MIR3 SINE MIR -19 189 62 1119 199 115 92 chr2 73505909 73506291 -179750292 - MLT1C LTR MaLR -2 465 75 1772 100 0 4 chr2 73506509 73506750 -179749833 + AluY SINE Alu 66 305 -6 222 287 96 35 chr2 73508033 73508148 -179748435 + MIR SINE MIR 20 141 -67 369 0 0 0 chr2 73508153 73508194 -179748389 + (TAA)n Simple_repeat Simple_repeat 2 42 0 1707 143 25 48 chr2 73509368 73509683 -179746900 - AluJb SINE Alu -4 308 1 210 71 0 0 chr2 73509687 73509715 -179746868 + (A)n Simple_repeat Simple_repeat 1 28 0 310 137 0 3 chr2 73509715 73509766 -179746817 - FAM SINE Alu -7 168 125 1830 147 39 0 chr2 73510248 73510534 -179746049 - AluJb SINE Alu -15 297 1 412 245 189 19 chr2 73510534 73510610 -179745973 - MIR SINE MIR -49 213 151 2012 146 0 0 chr2 73510610 73510912 -179745671 - AluSx SINE Alu 0 312 11 412 245 189 19 chr2 73510912 73510994 -179745589 - MIR SINE MIR -111 151 28 619 210 51 57 chr2 73511160 73511350 -179745233 + MIR3 SINE MIR 16 201 -7 897 286 118 9 chr2 73512508 73513097 -179743486 + MER115 DNA AcHobo 4 688 -5 273 240 0 0 chr2 73513267 73513363 -179743220 + (TG)n Simple_repeat Simple_repeat 1 96 0 460 259 35 14 chr2 73513513 73513656 -179742927 - MIR SINE MIR -109 153 8 237 233 95 60 chr2 73514075 73514191 -179742392 - L1M4 LINE L1 -3425 2721 2602 272 219 0 24 chr2 73514195 73514277 -179742306 + (TA)n Simple_repeat Simple_repeat 2 81 0 1672 201 85 0 chr2 73514360 73514723 -179741860 + MSTD LTR MaLR 1 394 -2 2045 113 56 0 chr2 73515091 73515375 -179741208 - AluSq SINE Alu -13 300 1 3426 206 56 32 chr2 73515478 73516400 -179740183 - L1ME1 LINE L1 -5 6230 5280 245 229 0 0 chr2 73516400 73516448 -179740135 + MER20 DNA MER1_type 172 219 0 5260 232 63 88 chr2 73516448 73516704 -179739879 - L1ME1 LINE L1 -4299 2097 1836 2042 141 10 3 chr2 73516704 73517008 -179739575 + AluJb SINE Alu 5 310 -2 5260 232 63 88 chr2 73517008 73518857 -179737726 - L1ME1 LINE L1 -4560 1836 46 1460 212 31 34 chr2 73518958 73519312 -179737271 + MLT1A1 LTR MaLR 2 354 -11 27 0 0 0 chr2 73519430 73519457 -179737126 + AT_rich Low_complexity Low_complexity 1 27 0 2349 173 91 26 chr2 73520476 73520566 -179736017 + MER44D DNA MER2_type 22 105 -2382 2140 120 0 13 chr2 73520566 73520866 -179735717 - AluSx SINE Alu -11 301 6 2349 173 91 26 chr2 73520866 73521272 -179735311 + MER44D DNA MER2_type 105 605 0 1832 59 5 0 chr2 73521397 73521616 -179734967 - AluSp SINE Alu -13 300 81 252 305 147 28 chr2 73522022 73522199 -179734384 + MIR SINE MIR 56 253 -9 227 79 26 0 chr2 73522918 73522956 -179733627 + (TA)n Simple_repeat Simple_repeat 2 40 0 2353 84 7 10 chr2 73524783 73525092 -179731491 + AluSq SINE Alu 6 313 0 235 308 8 25 chr2 73526355 73526475 -179730108 + L2 LINE L2 2637 2754 -560 195 340 124 28 chr2 73526627 73526877 -179729706 + L2 LINE L2 2918 3191 -81 735 258 35 9 chr2 73527730 73527959 -179728624 + MIR SINE MIR 10 244 -18 693 182 85 12 chr2 73529056 73529221 -179727362 + MIR3 SINE MIR 3 179 -29 247 229 17 0 chr2 73530602 73530720 -179725863 + (TG)n Simple_repeat Simple_repeat 2 121 0 442 257 16 38 chr2 73530755 73530938 -179725645 + (TG)n Simple_repeat Simple_repeat 1 179 0 2295 111 7 3 chr2 73531723 73532029 -179724554 - AluSg SINE Alu -3 307 1 2375 126 138 59 chr2 73533433 73533556 -179723027 + MLT2B2 LTR ERVL 1 113 -402 2142 108 11 0 chr2 73533556 73533834 -179722749 - AluSq SINE Alu -32 281 1 2375 126 138 59 chr2 73533834 73534187 -179722396 + MLT2B2 LTR ERVL 113 515 0 398 353 46 6 chr2 73535151 73535324 -179721259 - MER5A DNA MER1_type -6 183 4 750 236 72 85 chr2 73535561 73535773 -179720810 + MLT1H1 LTR MaLR 76 282 -273 267 54 0 0 chr2 73535773 73535810 -179720773 + (CAGA)n Simple_repeat Simple_repeat 2 38 0 750 236 72 85 chr2 73535810 73535999 -179720584 + MLT1H1 LTR MaLR 282 472 -83 402 164 0 0 chr2 73536054 73536127 -179720456 - MLT1H1 LTR MaLR -13 542 470 204 301 139 54 chr2 73536147 73536313 -179720270 - MIR SINE MIR -21 241 62 229 211 19 0 chr2 73537225 73537277 -179719306 + (TG)n Simple_repeat Simple_repeat 2 54 0 259 314 49 51 chr2 73538033 73538159 -179718424 - MIR SINE MIR -62 146 45 499 216 11 119 chr2 73538186 73538342 -179718241 + MER5B DNA MER1_type 6 141 -37 324 252 232 26 chr2 73538342 73538493 -179718090 + MER5A DNA MER1_type 2 183 -6 2054 128 0 0 chr2 73539504 73539792 -179716791 - AluSx SINE Alu -4 308 21 229 216 0 125 chr2 73540301 73540389 -179716194 - MIR SINE MIR -1 261 185 280 197 70 14 chr2 73543076 73543147 -179713436 + MER5A DNA MER1_type 47 121 -68 183 200 156 0 chr2 73543500 73543545 -179713038 + L2 LINE L2 3209 3260 -12 661 242 38 6 chr2 73545185 73545342 -179711241 - MER5B DNA MER1_type 0 178 17 362 247 133 12 chr2 73545557 73545723 -179710860 - L1ME4a LINE L1 0 6121 5936 296 288 143 50 chr2 73545758 73546735 -179709848 - L1ME4a LINE L1 -769 5377 4310 2529 158 109 30 chr2 73546760 73547279 -179709304 + LTR8A LTR ERV1 1 570 -157 533 209 0 0 chr2 73547283 73547369 -179709214 + AluJ/FLAM SINE Alu 3 88 -224 859 152 39 79 chr2 73547380 73547558 -179709025 + LTR8A LTR ERV1 557 727 0 405 318 56 31 chr2 73547567 73547762 -179708821 - L1ME4a LINE L1 -1870 4276 4077 1023 150 0 13 chr2 73547772 73547925 -179708658 - AluJo SINE Alu -151 161 11 427 268 37 47 chr2 73547944 73548134 -179708449 - L1ME4a LINE L1 -2259 3887 3700 2124 102 16 33 chr2 73548938 73549242 -179707341 - AluY SINE Alu -12 299 1 1885 152 14 3 chr2 73550165 73550454 -179706129 - AluJb SINE Alu -10 302 11 872 234 99 0 chr2 73551408 73551609 -179704974 + MIR SINE MIR 12 232 -30 236 267 89 30 chr2 73553051 73553152 -179703431 - MIR SINE MIR -117 145 39 369 0 0 0 chr2 73553509 73553550 -179703033 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 207 217 22 22 chr2 73554566 73554612 -179701971 + MIR SINE MIR 95 140 -68 318 371 11 38 chr2 73554638 73554737 -179701846 - MIR3 SINE MIR -18 190 97 2009 107 31 28 chr2 73554737 73555027 -179701556 + AluSx SINE Alu 8 298 -14 318 371 11 38 chr2 73555027 73555113 -179701470 - MIR3 SINE MIR -111 97 10 374 299 93 62 chr2 73555726 73556018 -179700565 + L1ME LINE L1 5426 5732 -389 2005 154 3 0 chr2 73556018 73556311 -179700272 - AluJb SINE Alu -18 294 1 374 299 93 62 chr2 73556311 73556372 -179700211 + L1ME LINE L1 5732 5790 -331 31 0 0 0 chr2 73556402 73556433 -179700150 + AT_rich Low_complexity Low_complexity 1 31 0 25 0 0 0 chr2 73557497 73557522 -179699061 + AT_rich Low_complexity Low_complexity 1 25 0 269 289 173 19 chr2 73558575 73558679 -179697904 - L2 LINE L2 -42 3230 3111 380 181 267 0 chr2 73558696 73558812 -179697771 - MER5A DNA MER1_type 0 189 43 639 273 76 31 chr2 73558974 73559263 -179697320 + MER90 LTR ERV1 248 549 -26 299 225 157 11 chr2 73559784 73559873 -179696710 - MER91A DNA MER1_type -4 192 91 568 221 193 21 chr2 73559878 73560023 -179696560 - MER91A DNA MER1_type -25 171 2 314 191 110 59 chr2 73560045 73560181 -179696402 + L2 LINE L2 2214 2356 -958 354 324 35 12 chr2 73560260 73560430 -179696153 + L2 LINE L2 2673 2846 -468 268 293 60 67 chr2 73560833 73560983 -179695600 + MIR3 SINE MIR 57 205 -3 2111 83 41 0 chr2 73562794 73563060 -179693523 + AluSc SINE Alu 1 277 -32 1419 167 27 14 chr2 73564343 73564637 -179691946 + L1MA4 LINE L1 6002 6299 -1 329 312 35 40 chr2 73565211 73565384 -179691199 + HAL1 LINE L1 1368 1539 -968 1946 173 0 0 chr2 73565413 73565714 -179690869 + AluJo SINE Alu 1 301 -11 504 340 88 46 chr2 73565719 73566050 -179690533 + L1ME4a LINE L1 2245 2589 -3557 604 321 82 37 chr2 73566100 73567820 -179688763 + L1ME4a LINE L1 2720 4517 -1629 395 252 71 8 chr2 73567841 73567968 -179688615 - L2 LINE L2 -4 3309 3175 234 219 0 105 chr2 73567974 73568079 -179688504 + L1ME4a LINE L1 4557 4650 -1496 2259 136 0 0 chr2 73568081 73568382 -179688201 - AluSx SINE Alu -11 301 1 487 325 56 34 chr2 73568485 73568753 -179687830 + L1ME4a LINE L1 5087 5360 -786 1872 172 23 0 chr2 73568760 73569171 -179687412 + AluJb SINE Alu 1 418 0 871 278 58 27 chr2 73569202 73569622 -179686961 + L1P1 LINE L1 5385 5814 -341 383 276 54 70 chr2 73569624 73569809 -179686774 + L1ME4a LINE L1 5926 6107 -14 256 204 0 163 chr2 73570766 73570864 -179685719 + MIR3 SINE MIR 111 192 -16 1011 73 15 0 chr2 73572789 73572925 -179683658 + L1PA10 LINE L1 6027 6164 -4 209 289 26 13 chr2 73573668 73573744 -179682839 + MIR SINE MIR 21 97 -111 791 149 123 13 chr2 73574234 73574388 -179682195 - MER5B DNA MER1_type 0 178 8 2075 166 14 59 chr2 73574591 73575013 -179681570 + MER57A LTR ERV1 1 403 0 744 251 27 5 chr2 73575381 73575568 -179681015 + MIR3 SINE MIR 9 199 -9 1143 241 23 12 chr2 73576547 73576804 -179679779 + MIR SINE MIR 2 261 -1 305 268 12 12 chr2 73577092 73577174 -179679409 + MER21B LTR ERV1 1 82 -781 503 253 45 69 chr2 73577238 73577440 -179679143 + MER21B LTR ERV1 98 294 -569 766 267 53 93 chr2 73577504 73577957 -179678626 + MER21B LTR ERV1 303 737 -126 414 253 100 74 chr2 73577974 73578077 -179678506 - MIR SINE MIR -27 235 136 2487 99 0 0 chr2 73578077 73578389 -179678194 + AluSx SINE Alu 1 312 0 414 253 100 74 chr2 73578389 73578514 -179678069 - MIR SINE MIR -126 136 1 * 803 226 105 67 chr2 73578514 73578824 -179677759 + L3 LINE CR1 1250 1571 -6 2289 103 0 3 chr2 73579246 73579547 -179677036 + AluSc SINE Alu 1 300 -9 353 297 47 14 chr2 73584598 73584749 -179671834 - MIR SINE MIR -55 153 3 552 293 97 17 chr2 73586623 73586913 -179669670 + MLT1J2 LTR MaLR 1 313 -137 237 232 85 37 chr2 73587028 73587110 -179669473 - HAL1b LINE L1 -1177 171 86 557 249 11 50 chr2 73588162 73588343 -179668240 - MER104 DNA Tc2 -6 174 1 639 283 72 28 chr2 73589012 73589263 -179667320 + MIR SINE MIR 1 262 0 752 252 87 8 chr2 73590927 73591169 -179665414 + MIR SINE MIR 2 262 0 1172 203 103 47 chr2 73591335 73591675 -179664908 + MLT1C LTR MaLR 34 392 -75 501 234 130 0 chr2 73591679 73591839 -179664744 - MER5A DNA MER1_type -2 187 4 2435 29 0 0 chr2 73591859 73592131 -179664452 + AluYa5 SINE Alu 39 310 -1 361 268 120 7 chr2 73592935 73593077 -179663506 + MER117 DNA MER1_type 6 163 -34 225 0 0 0 chr2 73593305 73593330 -179663253 + (TCTCCC)n Simple_repeat Simple_repeat 2 26 0 2195 103 0 4 chr2 73593528 73593809 -179662774 + AluSx SINE Alu 1 280 -32 378 0 0 0 chr2 73593809 73593851 -179662732 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 273 237 66 0 chr2 73594231 73594307 -179662276 - MIR3 SINE MIR -19 189 109 833 231 210 36 chr2 73595004 73595390 -179661193 + LTR33A LTR ERVL 71 523 0 1937 153 81 0 chr2 73596601 73596922 -179659661 + MER7A DNA MER2_type 1 345 -1 259 308 13 13 chr2 73597406 73597484 -179659099 + L2 LINE L2 3189 3266 -47 1666 141 93 28 chr2 73601628 73601918 -179654665 - AluSx SINE Alu -3 309 1 7475 30 0 0 chr2 73602791 73603653 -179652930 + L1PA5 LINE L1 5293 6154 0 535 274 25 13 chr2 73603815 73603972 -179652611 - MIR SINE MIR -76 186 28 6181 98 26 1 chr2 73604735 73605951 -179650632 + L1PA13 LINE L1 4924 6158 -5 223 153 28 42 chr2 73606521 73606593 -179649990 + (TTTG)n Simple_repeat Simple_repeat 2 72 0 2209 133 0 0 chr2 73606606 73606915 -179649668 - AluSx SINE Alu -3 309 1 732 256 19 39 chr2 73607564 73607771 -179648812 + MLT1I LTR MaLR 199 401 -8 23 33 0 0 chr2 73608347 73608377 -179648206 + AT_rich Low_complexity Low_complexity 1 30 0 287 252 35 61 chr2 73609662 73609777 -179646806 - L2 LINE L2 -339 2974 2863 321 295 70 31 chr2 73609856 73609985 -179646598 - L2 LINE L2 0 3313 3180 227 130 43 43 chr2 73610046 73610092 -179646491 + L1MC4 LINE L1 7164 7209 -833 * 621 117 48 186 chr2 73610069 73610300 -179646283 + L1MC4 LINE L1 7697 7895 -147 344 319 122 33 chr2 73610423 73610852 -179645731 - L2 LINE L2 -300 2972 2491 2563 57 0 0 chr2 73610920 73611219 -179645364 + AluY SINE Alu 1 299 -12 258 385 0 0 chr2 73612070 73612161 -179644422 + L2 LINE L2 2993 3083 -189 452 225 183 26 chr2 73612334 73612525 -179644058 - MIR SINE MIR -8 254 34 198 289 53 0 chr2 73612846 73612922 -179643661 - L2 LINE L2 -48 3224 3145 2572 60 0 3 chr2 73612923 73613225 -179643358 - AluY SINE Alu -10 301 1 2242 104 52 25 chr2 73614908 73615273 -179641310 - THE1C LTR MaLR 0 375 1 748 276 104 59 chr2 73615389 73615878 -179640705 + MLT1J LTR MaLR 1 511 0 319 241 106 14 chr2 73615906 73616047 -179640536 + MER103 DNA DNA 10 163 -3 1292 225 42 87 chr2 73616252 73616724 -179639859 + MLT1C LTR MaLR 17 467 0 378 309 7 7 chr2 73617000 73617136 -179639447 + MIR3 SINE MIR 67 202 -6 205 323 45 26 chr2 73617578 73617733 -179638850 - L3 LINE CR1 -352 1225 1068 419 257 17 74 chr2 73618245 73618420 -179638163 + MIR SINE MIR 98 262 0 699 258 90 38 chr2 73618434 73618701 -179637882 - L2 LINE L2 -759 2555 2275 522 242 153 0 chr2 73618713 73618870 -179637713 + MER5A DNA MER1_type 9 189 0 1011 284 248 12 chr2 73618874 73619722 -179636861 - L2 LINE L2 -1052 2262 1215 936 307 132 16 chr2 73620262 73621221 -179635362 + L2 LINE L2 353 1423 -1891 330 267 254 25 chr2 73621267 73621507 -179635076 + L2 LINE L2 3017 3311 -2 2494 81 7 0 chr2 73621694 73622003 -179634580 + AluSq SINE Alu 1 311 -2 2208 122 3 0 chr2 73622739 73623043 -179633540 - AluSq SINE Alu -8 305 1 517 298 35 39 chr2 73623050 73623305 -179633278 + HAL1 LINE L1 2254 2507 0 1211 162 5 15 chr2 73624524 73624722 -179631861 + AluJo SINE Alu 94 289 -23 1989 167 105 0 chr2 73625362 73625751 -179630832 + MSTB1 LTR MaLR 1 430 -2 228 325 72 10 chr2 73626790 73626984 -179629599 + HAL1b LINE L1 403 608 -740 2097 102 53 0 chr2 73627242 73627525 -179629058 + AluSx SINE Alu 1 298 -14 2368 82 7 0 chr2 73627592 73627884 -179628699 - AluY SINE Alu -17 294 1 21 36 0 0 chr2 73628016 73628044 -179628539 + AT_rich Low_complexity Low_complexity 1 28 0 462 229 10 0 chr2 73628343 73628439 -179628144 - MER81 DNA DNA -1 113 17 301 223 19 10 chr2 73628460 73628563 -179628020 + (TA)n Simple_repeat Simple_repeat 2 105 0 2516 79 0 0 chr2 73628618 73628921 -179627662 - AluSq SINE Alu -10 303 1 447 290 47 12 chr2 73629596 73629765 -179626818 - MIR SINE MIR -49 213 39 2454 86 0 0 chr2 73629800 73630103 -179626480 - AluSx SINE Alu -9 303 1 879 181 0 0 chr2 73630553 73630702 -179625881 + FRAM SINE Alu 1 149 -17 2127 147 0 0 chr2 73630986 73631298 -179625285 + AluSx SINE Alu 1 312 0 407 280 25 55 chr2 73631345 73631545 -179625038 + L2 LINE L2 3115 3308 -5 21 0 0 0 chr2 73631856 73631877 -179624706 + AT_rich Low_complexity Low_complexity 1 21 0 207 68 0 68 chr2 73632860 73632904 -179623679 + (TTTTTA)n Simple_repeat Simple_repeat 2 42 0 236 100 25 0 chr2 73633410 73633450 -179623133 + (GGGGA)n Simple_repeat Simple_repeat 2 42 0 21 36 0 0 chr2 73634181 73634209 -179622374 + GC_rich Low_complexity Low_complexity 1 28 0 360 235 0 42 chr2 73634218 73634384 -179622199 + (CCCCG)n Simple_repeat Simple_repeat 5 163 0 520 285 86 0 chr2 73634776 73634927 -179621656 + MIR3 SINE MIR 30 193 -15 206 340 14 57 chr2 73635162 73635303 -179621280 - MER5A DNA MER1_type -53 136 2 1167 204 9 5 chr2 73635865 73636086 -179620497 - MIR SINE MIR -33 229 8 2211 101 0 0 chr2 73636114 73636412 -179620171 - AluSx SINE Alu -14 298 1 334 188 0 62 chr2 73636553 73636633 -179619950 - L1MC4 LINE L1 -1339 6703 6629 2202 224 68 28 chr2 73637107 73637647 -179618936 + MLT1E LTR MaLR 31 592 -1 1260 225 80 25 chr2 73637697 73638021 -179618562 + LTR16C LTR ERVL 148 489 -2 192 318 103 0 chr2 73638149 73638256 -179618327 + MIR SINE MIR 30 147 -61 1763 198 54 8 chr2 73638273 73638646 -179617937 + MLT1B LTR MaLR 1 390 0 2413 111 16 30 chr2 73639458 73639827 -179616756 + THE1B LTR MaLR 1 364 0 455 192 91 0 chr2 73639957 73640056 -179616527 + MLT2B1 LTR ERVL 54 161 -253 * 709 259 86 10 chr2 73640054 73640251 -179616332 + MLT2B1 LTR ERVL 289 500 -15 3324 190 101 145 chr2 73640262 73640522 -179616061 + MLT1B-int LTR MaLR 1 271 -1100 819 144 0 0 chr2 73640522 73640647 -179615936 + AluSg/x SINE Alu 177 301 -9 3324 190 101 145 chr2 73640647 73640859 -179615724 + MLT1B-int LTR MaLR 271 491 -880 1859 164 13 0 chr2 73640859 73641158 -179615425 + AluSx SINE Alu 1 303 -9 3324 190 101 145 chr2 73641158 73641991 -179614592 + MLT1B-int LTR MaLR 491 1367 -4 1594 196 40 28 chr2 73642002 73642354 -179614229 + MLT1A2 LTR MaLR 1 356 -18 513 277 58 0 chr2 73642357 73642494 -179614089 + MIR SINE MIR 97 241 -21 2216 102 0 0 chr2 73642918 73643213 -179613370 + AluSp SINE Alu 5 299 -14 297 255 71 18 chr2 73643515 73643668 -179612915 + L1MD2 LINE L1 5574 5668 -453 575 250 92 0 chr2 73644131 73644295 -179612288 + MIR SINE MIR 57 235 -27 36 40 0 0 chr2 73644395 73644445 -179612138 + AT_rich Low_complexity Low_complexity 1 50 0 987 186 61 24 chr2 73647189 73647436 -179609147 + L1MC4 LINE L1 6817 7072 -970 1607 210 54 20 chr2 73647446 73647836 -179608747 + L1MD2 LINE L1 5731 6133 -226 696 225 19 0 chr2 73647846 73648006 -179608577 + L1MD2 LINE L1 6197 6359 0 2344 234 83 5 chr2 73648010 73648624 -179607959 + L1MC4 LINE L1 7239 7900 -142 26 0 0 0 chr2 73648676 73648702 -179607881 + AT_rich Low_complexity Low_complexity 1 26 0 2103 93 35 0 chr2 73648702 73648991 -179607592 + AluSg SINE Alu 1 299 -11 1946 97 45 14 chr2 73649616 73649905 -179606678 - AluSx SINE Alu -14 298 1 702 294 41 37 chr2 73650308 73650526 -179606057 - MIR SINE MIR -31 231 13 2221 64 3 20 chr2 73652220 73652518 -179604065 - AluY SINE Alu -17 294 2 577 260 143 39 chr2 73653310 73653541 -179603042 + MIR SINE MIR 8 262 0 368 282 159 27 chr2 73654005 73654225 -179602358 + MIR SINE MIR 2 250 -12 675 278 90 16 chr2 73654516 73655161 -179601422 + L1ME4a LINE L1 5309 6022 -99 22 0 0 0 chr2 73656505 73656527 -179600056 + GC_rich Low_complexity Low_complexity 1 22 0 182 37 37 0 chr2 73656615 73656642 -179599941 + (CGGGGG)n Simple_repeat Simple_repeat 4 31 0 208 280 0 96 chr2 73656760 73656885 -179599698 - MER5B DNA MER1_type -10 168 56 1758 159 10 10 chr2 73657461 73657775 -179598808 - L1PA16 LINE L1 -6 6160 5847 4247 211 127 43 chr2 73657780 73658352 -179598231 - L1MC4 LINE L1 -138 7904 7381 2323 69 0 10 chr2 73658352 73658658 -179597925 + AluY SINE Alu 1 303 -8 4247 211 127 43 chr2 73658658 73659419 -179597164 - L1MC4 LINE L1 -661 7381 6459 21 0 0 0 chr2 73659639 73659660 -179596923 + AT_rich Low_complexity Low_complexity 1 21 0 667 251 170 32 chr2 73660067 73660478 -179596105 - MLT1J LTR MaLR -40 471 4 347 179 12 95 chr2 73660564 73660648 -179595935 + L2 LINE L2 3235 3311 -2 340 271 83 0 chr2 73663216 73663312 -179593271 - MIR SINE MIR -60 148 45 345 256 21 99 chr2 73663801 73663916 -179592667 + MIR SINE MIR 1 123 -139 2360 103 20 8 chr2 73663916 73664267 -179592316 - THE1A LTR MaLR 0 355 1 12341 83 5 0 chr2 73664267 73665839 -179590744 - THE1A-int LTR MaLR 0 1580 1 2126 113 65 9 chr2 73665839 73666175 -179590408 - THE1A LTR MaLR 0 355 1 345 256 21 99 chr2 73666175 73666301 -179590282 + MIR SINE MIR 120 230 -32 620 341 41 0 chr2 73666311 73666531 -179590052 - MIR SINE MIR -32 230 2 610 233 0 23 chr2 73668106 73668239 -179588344 + L2 LINE L2 3182 3311 -2 1861 132 14 0 chr2 73668291 73668602 -179587981 + AluSx SINE Alu 11 312 0 1794 153 3 3 chr2 73668618 73668906 -179587677 + AluJb SINE Alu 1 288 -24 362 313 47 48 chr2 73670159 73670448 -179586135 + L1M4 LINE L1 2426 2767 -3379 23 0 0 0 chr2 73670458 73670481 -179586102 + AT_rich Low_complexity Low_complexity 1 23 0 3402 60 2 20 chr2 73670481 73670849 -179585734 - L1PA6 LINE L1 -9 6145 5785 2200 67 3 13 chr2 73670849 73671149 -179585434 - AluY SINE Alu -14 297 1 3402 60 2 20 chr2 73671149 73671226 -179585357 - L1PA6 LINE L1 -369 5785 5708 8536 134 39 45 chr2 73671345 73671481 -179585102 + Tigger2 DNA MER2_type 2 137 -2581 1869 140 0 23 chr2 73671481 73671781 -179584802 - AluSx SINE Alu -19 293 1 8536 134 39 45 chr2 73671781 73672847 -179583736 + Tigger2 DNA MER2_type 137 1194 -1524 1923 145 3 0 chr2 73672847 73673143 -179583440 - AluJb SINE Alu -15 297 1 8536 134 39 45 chr2 73673143 73673472 -179583111 + Tigger2 DNA MER2_type 1194 1524 -1194 1527 173 10 10 chr2 73673472 73673761 -179582822 + AluJo SINE Alu 1 289 -23 26 0 0 0 chr2 73673761 73673787 -179582796 + AT_rich Low_complexity Low_complexity 1 26 0 369 98 0 0 chr2 73673996 73674047 -179582536 + Alu SINE Alu 241 291 -11 1935 118 0 0 chr2 73674079 73674351 -179582232 + AluSx SINE Alu 1 272 -40 330 257 99 0 chr2 73674559 73674660 -179581923 - L2 LINE L2 -1 3271 3161 322 136 53 30 chr2 73675430 73675562 -179581021 + (CA)n Simple_repeat Simple_repeat 2 136 0 2409 72 3 0 chr2 73676252 73676557 -179580026 + AluSq SINE Alu 1 306 -7 1401 154 30 75 chr2 73677713 73678018 -179578565 + AluJb SINE Alu 1 291 -21 2066 113 3 10 chr2 73679401 73679890 -179576693 - AluSq SINE Alu 0 313 5 253 364 84 31 chr2 73679896 73680310 -179576273 - L2 LINE L2 -251 3021 2583 616 204 129 0 chr2 73680310 73680457 -179576126 + MER5A DNA MER1_type 1 166 -23 572 206 54 60 chr2 73680485 73680669 -179575914 + MER58A DNA MER1_type 27 209 -15 494 208 45 51 chr2 73680679 73680857 -179575726 + MER5B DNA MER1_type 2 178 0 582 284 85 15 chr2 73681461 73681662 -179574921 - MIR SINE MIR -34 228 14 1444 182 158 19 chr2 73684132 73684345 -179572238 + L1ME1 LINE L1 4780 4962 -1184 2369 68 7 7 chr2 73684345 73684655 -179571928 + AluY SINE Alu 1 310 -1 1444 182 158 19 chr2 73684655 73684858 -179571725 + L1ME1 LINE L1 4962 5254 -892 778 207 82 43 chr2 73684858 73685139 -179571444 + L1ME1 LINE L1 5892 6333 -1 250 208 0 65 chr2 73686161 73686238 -179570345 - MIR SINE MIR -171 91 20 847 180 7 0 chr2 73686950 73687089 -179569494 - MER2 DNA MER2_type -204 141 2 1691 210 138 110 chr2 73687090 73687641 -179568942 + MER21B LTR ERV1 9 590 -273 1515 133 3 123 chr2 73687641 73687973 -179568610 - AluJo SINE Alu -10 292 1 1691 210 138 110 chr2 73687973 73688194 -179568389 + MER21B LTR ERV1 590 803 -60 255 31 0 0 chr2 73689025 73689057 -179567526 + (TG)n Simple_repeat Simple_repeat 2 33 0 2061 121 16 3 chr2 73689661 73689968 -179566615 + AluSx SINE Alu 1 311 -1 282 227 0 40 chr2 73689968 73690043 -179566540 + MLT1K LTR MaLR 364 435 -153 276 289 137 42 chr2 73690115 73690305 -179566278 + L2 LINE L2 2498 2705 -609 4521 130 121 118 chr2 73690306 73690765 -179565818 + L1MC3 LINE L1 6625 7081 -704 250 324 0 29 chr2 73690765 73690867 -179565716 + MLT1I LTR MaLR 13 111 -456 4521 130 121 118 chr2 73690867 73691464 -179565119 + L1MC3 LINE L1 7081 7785 0 1525 166 28 14 chr2 73691466 73691749 -179564834 - AluJb SINE Alu -25 287 1 1718 186 0 7 chr2 73691778 73692084 -179564499 + AluJo SINE Alu 1 304 -8 243 0 0 0 chr2 73692285 73692312 -179564271 + (TTAAA)n Simple_repeat Simple_repeat 4 30 0 1380 166 8 12 chr2 73692312 73692559 -179564024 - AluJo SINE Alu -33 279 34 273 262 57 35 chr2 73692578 73692719 -179563864 - LTR67 LTR ERVL -408 149 6 281 305 175 7 chr2 73692835 73693124 -179563459 + L2 LINE L2 2719 3047 -225 194 128 26 0 chr2 73693645 73693684 -179562899 + GA-rich Low_complexity Low_complexity 1 40 0 229 191 0 21 chr2 73694313 73694360 -179562223 + LTR16A1 LTR ERVL 280 325 -132 2136 113 3 0 chr2 73694586 73694879 -179561704 - AluSx SINE Alu -18 294 1 1630 224 67 49 chr2 73695112 73695602 -179560981 - LTR53 LTR ERVL 0 519 21 312 324 113 38 chr2 73698041 73698279 -179558304 - MIR SINE MIR -1 261 6 250 135 173 0 chr2 73698345 73698397 -179558186 + MLT1I LTR MaLR 1 61 -348 593 274 105 26 chr2 73698493 73698759 -179557824 + MLT1I LTR MaLR 113 399 -10 222 211 0 39 chr2 73700084 73700136 -179556447 - L2 LINE L2 0 3272 3223 435 317 63 0 chr2 73701982 73702124 -179554459 - L2 LINE L2 0 3272 3122 419 356 39 30 chr2 73702191 73702553 -179554030 - L2 LINE L2 -337 2977 2613 182 208 21 0 chr2 73702952 73703000 -179553583 + GA-rich Low_complexity Low_complexity 4 52 0 281 140 18 0 chr2 73703019 73703076 -179553507 + (TGGA)n Simple_repeat Simple_repeat 2 59 0 188 258 16 32 chr2 73705212 73705274 -179551309 - L2 LINE L2 -49 3223 3163 34 55 0 0 chr2 73705686 73705741 -179550842 + AT_rich Low_complexity Low_complexity 1 55 0 1882 132 4 4 chr2 73705766 73706073 -179550510 + AluSx SINE Alu 1 307 0 2150 97 0 0 chr2 73706256 73706574 -179550009 - AluY SINE Alu 0 311 1 379 274 46 102 chr2 73706752 73707037 -179549546 + MLT1K LTR MaLR 319 587 -1 238 293 40 0 chr2 73707423 73707522 -179549061 - L1M4 LINE L1 -1300 4846 4744 349 233 116 0 chr2 73707523 73707609 -179548974 - MLT1B LTR MaLR -294 96 1 1217 246 113 15 chr2 73707627 73708098 -179548485 + L1MEc LINE L1 833 1349 -5047 39230 79 11 6 chr2 73708118 73714234 -179542349 + L1PA6 LINE L1 11 6150 -4 964 245 50 11 chr2 73714226 73714508 -179542075 + L1MC3 LINE L1 5838 6130 -1655 * 4437 124 33 62 chr2 73714510 73715301 -179541282 + L1PA16 LINE L1 5315 6082 -84 180 0 0 0 chr2 73715329 73715349 -179541234 + (TTG)n Simple_repeat Simple_repeat 2 21 0 853 186 19 13 chr2 73715354 73715510 -179541073 - FAM SINE Alu -17 158 2 1151 184 31 14 chr2 73715659 73715882 -179540701 + MLT1F1 LTR MaLR 341 567 0 446 318 58 22 chr2 73715975 73716198 -179540385 + ERVL LTR ERVL 5197 5427 -337 2196 93 7 0 chr2 73716296 73716596 -179539987 + AluSx SINE Alu 1 302 -10 283 293 17 17 chr2 73717012 73717128 -179539455 + LTR67 LTR ERVL 433 548 -9 1999 124 0 0 chr2 73717129 73717435 -179539148 + AluSx SINE Alu 1 306 0 264 291 163 20 chr2 73717972 73718267 -179538316 - L1M4 LINE L1 -1311 6254 5918 336 263 53 0 chr2 73719120 73719196 -179537387 - L1MC4 LINE L1 -1355 6687 6608 1957 109 7 0 chr2 73719381 73719656 -179536927 + AluSx SINE Alu 35 311 -1 586 303 38 0 chr2 73719988 73720173 -179536410 + MER63A DNA MER1_type 19 210 0 337 314 198 10 chr2 73720785 73720992 -179535591 + L2 LINE L2 2701 2946 -368 180 77 0 0 chr2 73720995 73721021 -179535562 + (TATG)n Simple_repeat Simple_repeat 2 27 0 718 213 69 127 chr2 73721026 73721212 -179535371 - L1MC4 LINE L1 -128 7914 7719 1708 163 24 3 chr2 73721212 73721500 -179535083 + AluJb SINE Alu 1 294 -18 718 213 69 127 chr2 73721500 73721778 -179534805 - L1MC4 LINE L1 -323 7719 7477 2136 207 65 62 chr2 73722428 73722993 -179533590 + L1MEc LINE L1 34 600 -5796 1174 69 13 19 chr2 73722997 73723156 -179533427 + L1PA10 LINE L1 6006 6163 -5 9259 170 27 42 chr2 73723176 73724781 -179531802 - L1M4 LINE L1 -1913 5652 4090 2015 157 136 29 chr2 73724781 73725194 -179531389 + MSTB2 LTR MaLR 1 457 0 9259 170 27 42 chr2 73725194 73725902 -179530681 - L1M4 LINE L1 -3475 4090 3373 870 110 0 22 chr2 73725902 73726038 -179530545 - THE1C LTR MaLR -43 332 200 656 92 0 20 chr2 73726047 73726145 -179530438 + L1PB3 LINE L1 6057 6152 -2 1106 159 169 0 chr2 73726156 73726363 -179530220 + MSTB LTR MaLR 185 426 0 189 355 0 0 chr2 73726839 73726901 -179529682 + L2 LINE L2 2698 2759 -555 603 265 82 16 chr2 73727126 73727371 -179529212 + MIR SINE MIR 2 262 0 797 139 0 0 chr2 73727381 73727496 -179529087 + FLAM_A SINE Alu 1 115 -18 31 0 0 0 chr2 73727500 73727531 -179529052 + AT_rich Low_complexity Low_complexity 1 31 0 186 316 149 47 chr2 73728451 73729007 -179527576 + L2 LINE L2 1859 2471 -843 1225 240 135 24 chr2 73729007 73729423 -179527160 - MLT1C LTR MaLR 0 467 6 1997 121 0 7 chr2 73729479 73729819 -179526764 - AluSq SINE Alu 0 338 1 2134 125 0 0 chr2 73729837 73730149 -179526434 - AluSx SINE Alu 0 312 1 447 260 150 70 chr2 73730154 73730341 -179526242 + L2 LINE L2 2522 2692 -580 396 0 0 0 chr2 73730341 73730385 -179526198 + (CA)n Simple_repeat Simple_repeat 2 45 0 447 260 150 70 chr2 73730385 73730859 -179525724 + L2 LINE L2 2692 3240 -32 856 298 12 16 chr2 73730860 73731115 -179525468 - MIR SINE MIR -6 256 3 613 65 13 0 chr2 73731498 73731575 -179525008 - AluSq/x SINE Alu -181 131 54 1088 47 87 7 chr2 73731576 73731725 -179524858 + AluSg/x SINE Alu 140 300 -12 603 232 197 35 chr2 73731742 73731862 -179524721 + L1MC5 LINE L1 7309 7408 -553 315 49 0 0 chr2 73731862 73731903 -179524680 + (CA)n Simple_repeat Simple_repeat 2 42 0 603 232 197 35 chr2 73731903 73732088 -179524495 + L1MC5 LINE L1 7408 7562 -399 1840 132 3 21 chr2 73732088 73732405 -179524178 - AluJb SINE Alu 0 312 1 603 232 197 35 chr2 73732405 73732472 -179524111 + L1MC5 LINE L1 7562 7744 -217 272 225 163 23 chr2 73732484 73732613 -179523970 + L1MC5 LINE L1 7789 7935 -26 1524 174 3 35 chr2 73732806 73733117 -179523466 + AluJo SINE Alu 1 301 -11 397 229 143 12 chr2 73733267 73733418 -179523165 + HAL1 LINE L1 323 693 -1814 * 669 230 125 8 chr2 73733406 73733654 -179522929 + HAL1 LINE L1 1894 2170 -337 360 289 29 81 chr2 73733802 73733928 -179522655 - L1M4 LINE L1 -3558 2588 2457 2324 47 0 29 chr2 73733928 73734205 -179522378 + AluY SINE Alu 29 297 -14 360 289 29 81 chr2 73734205 73734237 -179522346 - L1M4 LINE L1 -3689 2457 2437 1899 138 20 20 chr2 73734237 73734541 -179522042 + AluJo SINE Alu 2 305 -7 360 289 29 81 chr2 73734541 73734554 -179522029 - L1M4 LINE L1 -3709 2437 2425 295 257 40 54 chr2 73734563 73734711 -179521872 - L1M4 LINE L1 -3791 2355 2210 1471 204 26 66 chr2 73734903 73735231 -179521352 + MLT1A1 LTR MaLR 3 316 -49 2173 105 3 55 chr2 73735231 73735556 -179521027 - AluSx SINE Alu -4 308 1 1471 204 26 66 chr2 73735556 73735605 -179520978 + MLT1A1 LTR MaLR 316 365 0 201 39 0 0 chr2 73736114 73736140 -179520443 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 1774 171 3 11 chr2 73736140 73736427 -179520156 - AluJb SINE Alu -27 285 1 892 168 7 0 chr2 73736429 73736584 -179519999 - MLT1A1 LTR MaLR -209 156 1 457 306 81 0 chr2 73737822 73737982 -179518601 + MIR SINE MIR 4 176 -86 247 116 0 23 chr2 73738112 73738155 -179518428 - L1M4 LINE L1 -525 5653 5612 3693 70 40 14 chr2 73738428 73738926 -179517657 + MER9 LTR ERVK 1 511 0 1767 168 3 14 chr2 73739150 73739442 -179517141 - AluJo SINE Alu -13 299 11 410 236 0 0 chr2 73739846 73739918 -179516665 - MER91A DNA MER1_type -119 77 6 353 317 49 19 chr2 73740432 73740637 -179515946 + L1ME4a LINE L1 5632 5842 -279 516 301 53 41 chr2 73740749 73741082 -179515501 + L1ME LINE L1 5367 5699 -422 2145 130 3 0 chr2 73741082 73741374 -179515209 - AluJb SINE Alu -19 293 1 516 301 53 41 chr2 73741374 73741491 -179515092 + L1ME LINE L1 5699 5813 -308 2186 128 10 0 chr2 73741530 73741827 -179514756 + AluSx SINE Alu 1 300 -12 36172 87 8 14 chr2 73741827 73747998 -179508585 + L1PA6 LINE L1 17 6150 -4 2353 86 0 3 chr2 73747998 73748322 -179508261 + Tigger1 DNA MER2_type 1735 2057 -361 22 35 0 0 chr2 73748322 73748351 -179508232 + AT_rich Low_complexity Low_complexity 1 29 0 318 238 67 9 chr2 73748593 73748698 -179507885 + L1MC4 LINE L1 6445 6556 -1440 1229 186 18 5 chr2 73748699 73748920 -179507663 + AluJo SINE Alu 85 308 -4 4644 153 17 12 chr2 73748920 73749803 -179506780 + L1MB8 LINE L1 5287 6173 -5 1807 232 128 20 chr2 73749818 73750453 -179506130 + L1MC4 LINE L1 6978 7845 -197 245 197 16 16 chr2 73750491 73750552 -179506031 + L1MC4 LINE L1 7981 8041 -1 1162 229 130 20 chr2 73750577 73751022 -179505561 + L1MC4 LINE L1 7538 8031 -11 26 30 0 0 chr2 73751027 73751060 -179505523 + AT_rich Low_complexity Low_complexity 1 33 0 2234 74 10 33 chr2 73751240 73751539 -179505044 - AluSq SINE Alu -21 292 1 240 313 120 29 chr2 73752810 73753126 -179503457 + L1ME LINE L1 5564 5908 -213 22 0 0 0 chr2 73753159 73753181 -179503402 + AT_rich Low_complexity Low_complexity 1 22 0 203 260 26 26 chr2 73753725 73753802 -179502781 + C-rich Low_complexity Low_complexity 6 82 0 252 0 0 0 chr2 73754367 73754395 -179502188 + (CA)n Simple_repeat Simple_repeat 2 29 0 258 322 0 0 chr2 73755391 73755481 -179501102 + L1MB7 LINE L1 5451 5540 -2268 1644 168 7 29 chr2 73755753 73756062 -179500521 + AluJo SINE Alu 1 302 -10 329 170 189 38 chr2 73756467 73756573 -179500010 + L2 LINE L2 3186 3307 -6 267 54 0 0 chr2 73757621 73757658 -179498925 + (CA)n Simple_repeat Simple_repeat 2 38 0 667 257 86 40 chr2 73758234 73758456 -179498127 - MIR SINE MIR -18 244 13 2435 154 27 0 chr2 73758693 73759133 -179497450 + L1MB7 LINE L1 5724 6175 -9 261 243 215 28 chr2 73760515 73760659 -179495924 - MER5B DNA MER1_type -2 176 6 27 29 0 0 chr2 73761595 73761629 -179494954 + AT_rich Low_complexity Low_complexity 1 34 0 551 134 0 10 chr2 73764822 73764919 -179491664 + (TTCC)n Simple_repeat Simple_repeat 3 98 0 26 50 0 0 chr2 73766544 73766584 -179489999 + GC_rich Low_complexity Low_complexity 1 40 0 396 303 0 10 chr2 73766899 73766998 -179489585 - L2 LINE L2 -2 3311 3214 228 362 145 5 chr2 73769391 73769598 -179486985 + MIR SINE MIR 21 256 -6 182 219 0 0 chr2 73769568 73769609 -179486974 + L2 LINE L2 3272 3312 -1 * 894 205 6 6 chr2 73772429 73772600 -179483983 - FRAM SINE Alu 0 40 1 188 273 0 0 chr2 73772873 73772917 -179483666 + L2 LINE L2 3269 3312 -1 926 245 21 47 chr2 73774399 73774738 -179481845 - L1MC/D LINE L1 -1989 5819 5490 324 316 91 21 chr2 73774858 73775045 -179481538 - L1MC/D LINE L1 -757 5389 5190 879 211 10 30 chr2 73775061 73775260 -179481323 - AluJo SINE Alu 0 312 118 481 216 0 21 chr2 73775279 73775376 -179481207 - AluSq/x SINE Alu -179 134 40 646 257 4 0 chr2 73775638 73775817 -179480766 - L1MC4a LINE L1 -344 5822 5649 756 216 84 32 chr2 73775909 73776219 -179480364 + L1MC5 LINE L1 7592 7917 -44 301 301 95 29 chr2 73776241 73776649 -179479934 - L1MC4a LINE L1 -469 5652 5254 183 42 0 0 chr2 73776699 73776723 -179479860 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 772 335 104 59 chr2 73776952 73777891 -179478692 - L1MC4a LINE L1 -56 6065 5092 320 330 148 16 chr2 73778067 73778249 -179478334 - L1MC4a LINE L1 -1368 4778 4573 2264 90 3 3 chr2 73778293 73778583 -179478000 + AluSx SINE Alu 1 290 -22 355 255 138 14 chr2 73778974 73779119 -179477464 - MLT1I LTR MaLR -4 405 243 29 28 0 0 chr2 73779270 73779306 -179477277 + AT_rich Low_complexity Low_complexity 1 36 0 2022 116 22 0 chr2 73779313 73779636 -179476947 + AluSx SINE Alu 1 329 0 379 331 46 0 chr2 73779650 73779780 -179476803 + L2 LINE L2 3137 3272 0 386 345 34 54 chr2 73779852 73780079 -179476504 - L1MC4a LINE L1 -1962 5846 5616 2242 109 3 13 chr2 73780079 73780383 -179476200 + AluSx SINE Alu 1 301 -11 386 345 34 54 chr2 73780383 73780709 -179475874 - L1MC4a LINE L1 -2192 5616 5304 2088 135 7 0 chr2 73780717 73781014 -179475569 - AluSx SINE Alu -13 299 1 2027 112 65 3 chr2 73781149 73781443 -179475140 - AluSx SINE Alu 0 312 1 232 333 0 0 chr2 73781505 73781625 -179474958 - L1MC4a LINE L1 -1088 5058 4939 2639 191 55 30 chr2 73782104 73782774 -179473809 - L1MD2 LINE L1 -13 6346 5660 2474 69 0 0 chr2 73782796 73783086 -179473497 + AluSq SINE Alu 15 304 -9 1084 138 0 12 chr2 73783088 73783270 -179473313 + AluSg/x SINE Alu 134 310 0 1080 176 90 36 chr2 73783272 73783550 -179473033 - L1MD2 LINE L1 -578 5664 5372 2018 85 118 0 chr2 73784528 73784799 -179471784 + AluY SINE Alu 1 303 -8 2072 107 9 95 chr2 73784838 73785174 -179471409 + AluSg SINE Alu 4 310 0 404 215 24 153 chr2 73785200 73785322 -179471261 + MIR SINE MIR 76 212 -50 716 131 62 46 chr2 73785322 73785452 -179471131 + FLAM_C SINE Alu 2 133 0 404 215 24 153 chr2 73785452 73785474 -179471109 + MIR SINE MIR 212 188 -74 1971 134 3 35 chr2 73785474 73785788 -179470795 + AluJb SINE Alu 3 306 -6 404 215 24 153 chr2 73785788 73785851 -179470732 + MIR SINE MIR 187 257 -5 252 59 0 0 chr2 73786553 73786587 -179469996 + (CA)n Simple_repeat Simple_repeat 1 34 0 218 258 18 0 chr2 73786828 73786898 -179469685 - MIR SINE MIR -60 148 77 225 65 0 0 chr2 73787837 73787868 -179468715 + (CTA)n Simple_repeat Simple_repeat 2 32 0 402 250 256 0 chr2 73787869 73788029 -179468554 - MIR SINE MIR -21 241 41 237 245 20 51 chr2 73788505 73788603 -179467980 + G-rich Low_complexity Low_complexity 4 98 0 237 178 0 0 chr2 73788932 73788977 -179467606 + (TG)n Simple_repeat Simple_repeat 1 45 0 416 294 0 0 chr2 73789175 73789277 -179467306 - MIR SINE MIR -4 258 157 1242 249 92 18 chr2 73789296 73789733 -179466850 - MER21B LTR ERV1 -69 794 326 1726 141 3 89 chr2 73789764 73790091 -179466492 + AluJo SINE Alu 1 299 -13 542 235 33 26 chr2 73790097 73790250 -179466333 - MER21B LTR ERV1 -615 248 95 216 0 0 0 chr2 73790259 73790283 -179466300 + (TTTA)n Simple_repeat Simple_repeat 4 27 0 873 136 0 0 chr2 73790284 73790409 -179466174 - FLAM_C SINE Alu -18 125 1 278 209 2 60 chr2 73790419 73790498 -179466085 - MIR SINE MIR -65 143 77 270 115 135 0 chr2 73790539 73790591 -179465992 - MIR SINE MIR -108 154 96 795 310 115 9 chr2 73790633 73791059 -179465524 - L2 LINE L2 -5 3308 2838 449 294 172 25 chr2 73791090 73791485 -179465098 - L2 LINE L2 -577 2737 2285 271 136 34 0 chr2 73791808 73791867 -179464716 + CT-rich Low_complexity Low_complexity 2 62 0 357 282 88 44 chr2 73792444 73792625 -179463958 + MER5A DNA MER1_type 1 189 0 537 265 63 5 chr2 73792694 73792883 -179463700 - MIR SINE MIR -34 228 29 204 345 24 0 chr2 73793025 73793109 -179463474 + L2 LINE L2 3228 3313 0 530 215 98 37 chr2 73794183 73794346 -179462237 - MER5B DNA MER1_type -5 173 1 321 290 130 0 chr2 73794733 73794864 -179461719 - MIR SINE MIR -4 258 111 468 244 67 12 chr2 73795218 73795320 -179461263 + MER5C DNA MER1_type 1 96 -228 2377 95 0 0 chr2 73795320 73795615 -179460968 + AluSg SINE Alu 1 295 -15 468 244 67 12 chr2 73795615 73795730 -179460853 + MER5C DNA MER1_type 96 322 -2 224 308 38 30 chr2 73795733 73795866 -179460717 + L2 LINE L2 3124 3257 -56 830 225 6 0 chr2 73795966 73796135 -179460448 + FRAM SINE Alu 1 170 -6 332 225 0 0 chr2 73796257 73796328 -179460255 - U13 snRNA snRNA -32 72 2 770 255 45 42 chr2 73797449 73797735 -179458848 + MER115 DNA AcHobo 68 354 -339 595 186 69 21 chr2 73797862 73798007 -179458576 - MER5B DNA MER1_type -19 159 8 462 279 65 20 chr2 73798155 73798356 -179458227 - L2 LINE L2 -953 2361 2152 193 54 0 54 chr2 73798540 73798577 -179458006 + (CCCCCA)n Simple_repeat Simple_repeat 5 39 0 258 32 0 0 chr2 73799769 73799780 -179456803 + (CA)n Simple_repeat Simple_repeat 1 11 -257 1553 118 5 0 chr2 73799780 73799991 -179456592 + AluSg/x SINE Alu 84 295 -15 258 32 0 0 chr2 73799991 73800006 -179456577 + (CA)n Simple_repeat Simple_repeat 10 268 0 258 32 0 0 chr2 73800006 73800037 -179456546 + (CA)n Simple_repeat Simple_repeat 2 32 0 411 222 42 78 chr2 73800108 73800275 -179456308 - L1MD3 LINE L1 0 7995 7835 524 222 89 15 chr2 73800276 73800411 -179456172 - L1MD2 LINE L1 -213 6146 6002 314 237 54 11 chr2 73800906 73800999 -179455584 + MER115 DNA AcHobo 597 693 0 229 289 119 38 chr2 73801137 73801296 -179455287 - L2 LINE L2 -86 3186 3015 202 54 27 27 chr2 73801720 73801757 -179454826 + (AGGGGG)n Simple_repeat Simple_repeat 5 41 0 2171 117 3 16 chr2 73806815 73807122 -179449461 - AluJb SINE Alu 0 312 10 340 297 20 0 chr2 73807130 73807231 -179449352 - L2 LINE L2 -14 3299 3197 198 71 0 0 chr2 73807982 73808010 -179448573 + (GA)n Simple_repeat Simple_repeat 2 29 0 410 234 19 9 chr2 73808522 73808629 -179447954 + MIR3 SINE MIR 50 157 -51 189 286 71 0 chr2 73808863 73808919 -179447664 - L3b LINE CR1 -196 1387 1328 218 32 32 0 chr2 73809090 73809121 -179447462 + (CA)n Simple_repeat Simple_repeat 2 33 0 2533 63 3 0 chr2 73810577 73810880 -179445703 - AluY SINE Alu -7 304 1 1417 194 46 25 chr2 73811031 73811356 -179445227 - Charlie4a DNA MER1_type -168 340 9 1427 132 84 30 chr2 73811448 73811615 -179444968 - L1MA5A LINE L1 -4 6293 6102 369 0 0 0 chr2 73811615 73811656 -179444927 + (TA)n Simple_repeat Simple_repeat 1 41 0 1427 132 84 30 chr2 73811656 73811784 -179444799 - L1MA5A LINE L1 -195 6102 5982 818 190 44 0 chr2 73812314 73812472 -179444111 + MER5A DNA MER1_type 22 186 -3 737 143 63 51 chr2 73813197 73813372 -179443211 - MER5A DNA MER1_type -12 177 1 181 278 122 11 chr2 73814002 73814092 -179442491 - L3b LINE CR1 -207 1376 1277 1132 85 0 0 chr2 73814154 73814295 -179442288 - AluSc SINE Alu -13 296 156 967 273 91 43 chr2 73815156 73815617 -179440966 - L1MC4a LINE L1 -1963 5845 5363 30 45 0 0 chr2 73815889 73815933 -179440650 + AT_rich Low_complexity Low_complexity 1 44 0 355 291 100 9 chr2 73816067 73816407 -179440176 - L1MC4a LINE L1 -1311 4835 4465 538 324 53 53 chr2 73816408 73816692 -179439891 - L1MC4a LINE L1 -1703 4443 4160 897 209 101 107 chr2 73816695 73816846 -179439737 - L1MC4 LINE L1 0 8042 7892 2575 74 0 0 chr2 73816846 73817156 -179439427 - AluSq SINE Alu -3 310 1 897 209 101 107 chr2 73817156 73817501 -179439082 - L1MC4 LINE L1 -150 7892 7549 2245 94 40 3 chr2 73817539 73817837 -179438746 + AluSp SINE Alu 1 309 -4 408 251 69 108 chr2 73817865 73818093 -179438490 - L1MC4a LINE L1 -1979 4167 3932 2341 98 0 3 chr2 73818093 73818390 -179438193 + AluSx SINE Alu 1 296 -16 408 251 69 108 chr2 73818390 73818680 -179437903 - L1MC4a LINE L1 -2214 3932 3669 937 256 145 88 chr2 73818715 73818879 -179437704 - L1M4 LINE L1 -1952 4194 4041 1962 131 29 0 chr2 73818879 73819179 -179437404 - AluSx SINE Alu 0 308 1 937 256 145 88 chr2 73819179 73820347 -179436236 - L1M4 LINE L1 -2105 4041 2785 849 132 8 0 chr2 73820567 73820696 -179435887 - FLAM_C SINE Alu -3 130 1 579 181 0 134 chr2 73821072 73821243 -179435340 - AluJb SINE Alu -2 310 163 1603 162 89 3 chr2 73821260 73821587 -179434996 - L1MB7 LINE L1 -19 6165 5811 1327 197 78 19 chr2 73822307 73822505 -179434078 - L1MB7 LINE L1 -356 5822 5637 1839 140 55 0 chr2 73822505 73822798 -179433785 - AluSg SINE Alu -1 309 1 1327 197 78 19 chr2 73822798 73822992 -179433591 - L1MB7 LINE L1 -541 5637 5456 2141 120 27 0 chr2 73822992 73823164 -179433419 - AluSx SINE Alu -3 309 124 189 0 0 0 chr2 73823164 73823185 -179433398 + (TA)n Simple_repeat Simple_repeat 1 21 0 2141 120 27 0 chr2 73823185 73823313 -179433270 - AluSx SINE Alu -188 124 1 1327 197 78 19 chr2 73823313 73823340 -179433243 - L1MB7 LINE L1 -722 5456 5255 558 256 0 0 chr2 73823524 73823653 -179432930 - MIR SINE MIR -14 248 120 202 268 4 11 chr2 73823682 73823769 -179432814 - MIR SINE MIR -99 109 37 189 343 114 18 chr2 73824378 73824544 -179432039 + L2 LINE L2 3073 3254 -18 211 232 53 53 chr2 73825335 73825430 -179431153 - MIR3 SINE MIR -49 159 65 553 217 139 0 chr2 73825588 73825768 -179430815 - MER3 DNA MER1_type -2 207 3 203 231 0 0 chr2 73827731 73827770 -179428813 - MIR SINE MIR -61 147 109 357 312 21 21 chr2 73829748 73829889 -179426694 + MIR SINE MIR 74 214 -48 198 0 0 0 chr2 73830028 73830050 -179426533 + (T)n Simple_repeat Simple_repeat 1 22 0 291 104 0 104 chr2 73831395 73831462 -179425121 + L1MC5 LINE L1 7834 7893 -68 198 0 0 0 chr2 73831462 73831484 -179425099 + (A)n Simple_repeat Simple_repeat 1 22 0 2035 139 3 0 chr2 73831504 73831799 -179424784 + 7SLRNA srpRNA srpRNA 22 317 -3 2036 113 7 3 chr2 73831808 73832090 -179424493 + AluSx SINE Alu 1 283 -29 207 0 0 0 chr2 73832091 73832114 -179424469 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 2341 92 0 46 chr2 73832197 73832524 -179424059 + AluSp SINE Alu 1 312 -1 1628 149 25 54 chr2 73832559 73832875 -179423708 + AluJb SINE Alu 1 307 -5 8553 198 49 38 chr2 73833438 73834551 -179422032 - L1MB8 LINE L1 -1 6413 5314 2290 104 3 0 chr2 73834551 73834849 -179421734 - AluSx SINE Alu -13 299 1 262 0 0 0 chr2 73834859 73834888 -179421695 + (TTTTG)n Simple_repeat Simple_repeat 3 165 0 2428 50 0 0 chr2 73834888 73835170 -179421413 - AluY SINE Alu -30 281 1 8553 198 49 38 chr2 73835170 73837243 -179419340 - L1MB8 LINE L1 -1108 5306 3205 2147 141 3 10 chr2 73837243 73837555 -179419028 + AluJb SINE Alu 1 310 -2 8553 198 49 38 chr2 73837555 73838293 -179418290 - L1MB8 LINE L1 -3209 3205 2477 884 176 0 0 chr2 73838299 73838430 -179418153 + FLAM_C SINE Alu 1 131 -12 260 196 20 0 chr2 73838446 73838497 -179418086 - L1MB8 LINE L1 -3905 2477 2426 285 301 36 25 chr2 73838562 73838841 -179417742 - L1MB8 LINE L1 -4024 2360 2079 398 303 62 53 chr2 73838852 73839060 -179417523 - L1MEc LINE L1 -4453 1943 1734 2848 215 56 30 chr2 73839092 73840402 -179416181 - L1M4c LINE L1 -4453 2685 1218 257 218 73 0 chr2 73841018 73841073 -179415510 - MLT1K LTR MaLR -2 586 528 690 186 16 0 chr2 73841527 73841651 -179414932 + MER5B DNA MER1_type 2 127 -51 310 288 209 7 chr2 73842625 73842708 -179413875 - MIR SINE MIR -34 228 163 7741 62 0 62 chr2 73842708 73843782 -179412801 - LTR13 LTR ERVK 0 1007 1 310 288 209 7 chr2 73843782 73843837 -179412746 - MIR SINE MIR -99 163 62 519 268 7 7 chr2 73843840 73843978 -179412605 + L1ME LINE L1 5530 5667 -454 27 0 0 0 chr2 73844487 73844514 -179412069 + GC_rich Low_complexity Low_complexity 1 27 0 2424 92 3 0 chr2 73845947 73846252 -179410331 + AluSp SINE Alu 1 306 -7 303 189 33 56 chr2 73846252 73846348 -179410235 + MIR SINE MIR 31 125 -83 277 182 0 0 chr2 73846352 73846396 -179410187 - MER5B DNA MER1_type -3 175 132 1121 102 57 23 chr2 73846397 73846574 -179410009 + AluSc SINE Alu 119 301 -8 2473 78 0 3 chr2 73846577 73846884 -179409699 + AluY SINE Alu 1 306 -5 495 244 9 0 chr2 73846886 73847001 -179409582 - MER5B DNA MER1_type -62 116 1 298 275 55 11 chr2 73847001 73847063 -179409520 + MIR SINE MIR 115 180 -82 907 256 129 46 chr2 73847095 73847490 -179409093 - L2 LINE L2 -3 3310 2883 325 348 25 8 chr2 73847660 73847778 -179408805 - MIR3 SINE MIR -46 162 43 401 313 227 15 chr2 73848978 73849304 -179407279 - L2 LINE L2 -23 3249 2855 731 268 110 28 chr2 73851850 73852104 -179404479 - L2 LINE L2 0 3272 2998 694 289 268 30 chr2 73852177 73853049 -179403534 - L2 LINE L2 -434 2880 1801 198 103 0 0 chr2 73854667 73854696 -179401887 + (TG)n Simple_repeat Simple_repeat 1 29 0 258 291 103 8 chr2 73857112 73857229 -179399354 - MIR SINE MIR -57 151 24 1820 102 160 0 chr2 73858060 73858316 -179398267 - AluSg SINE Alu -13 297 1 319 182 71 48 chr2 73858320 73858362 -179398221 + MER112 DNA MER1_type 8 48 -212 2455 92 3 0 chr2 73858362 73858668 -179397915 + AluSp SINE Alu 2 308 -5 319 182 71 48 chr2 73858668 73858818 -179397765 + MER112 DNA MER1_type 48 253 -7 183 314 38 63 chr2 73859348 73859507 -179397076 - L2 LINE L2 -2842 472 318 361 296 169 50 chr2 73859950 73860288 -179396295 - L2 LINE L2 -1 3271 2894 22 35 0 0 chr2 73860558 73860587 -179395996 + GC_rich Low_complexity Low_complexity 1 29 0 213 39 0 0 chr2 73860739 73860765 -179395818 + (CCG)n Simple_repeat Simple_repeat 3 28 0 182 289 0 0 chr2 73861165 73861210 -179395373 - L2 LINE L2 -21 3292 3248 228 276 118 0 chr2 73861246 73861322 -179395261 - MIR SINE MIR -64 144 60 2760 151 62 27 chr2 73861632 73862183 -179394400 + L1MB3 LINE L1 5601 6170 -13 1854 63 0 0 chr2 73862214 73862436 -179394147 + AluY SINE Alu 80 301 -10 1640 154 88 0 chr2 73862448 73862720 -179393863 + AluJo SINE Alu 1 296 -16 2558 48 0 19 chr2 73862728 73863044 -179393539 + AluY SINE Alu 2 311 0 589 226 16 38 chr2 73863046 73863232 -179393351 - Charlie4a DNA MER1_type -106 402 221 1634 187 19 0 chr2 73863391 73863658 -179392925 + AluJo SINE Alu 6 277 -35 2216 128 3 0 chr2 73863672 73863970 -179392613 - AluSx SINE Alu -13 299 1 388 188 125 0 chr2 73863982 73864062 -179392521 + L1MC/D LINE L1 5682 5771 -2037 1589 180 0 38 chr2 73864176 73864465 -179392118 - AluJo SINE Alu -32 280 3 276 53 0 0 chr2 73864902 73864940 -179391643 + (TC)n Simple_repeat Simple_repeat 1 38 0 1881 145 53 0 chr2 73864941 73865223 -179391360 - AluSx SINE Alu -15 297 1 205 244 56 67 chr2 73865266 73865356 -179391227 - MIR3 SINE MIR -22 186 98 1787 180 3 3 chr2 73865731 73866020 -179390563 + AluJo SINE Alu 1 289 -23 2378 79 3 16 chr2 73866029 73866346 -179390237 + AluSp SINE Alu 1 313 0 874 272 34 7 chr2 73866517 73866763 -179389820 - MIR SINE MIR 0 262 15 270 136 0 0 chr2 73868155 73868199 -179388384 + (CA)n Simple_repeat Simple_repeat 1 44 0 263 89 0 36 chr2 73868587 73868643 -179387940 + Alu SINE Alu 249 302 0 501 261 36 61 chr2 73868842 73868940 -179387643 - MIR SINE MIR -3 259 164 1794 163 7 11 chr2 73868940 73869257 -179387326 - AluJb SINE Alu 0 316 1 501 261 36 61 chr2 73869257 73869322 -179387261 - MIR SINE MIR -98 164 99 341 225 0 0 chr2 73869361 73869432 -179387151 + MER81 DNA DNA 44 114 0 192 125 0 0 chr2 73869516 73869548 -179387035 + (CA)n Simple_repeat Simple_repeat 1 32 0 185 280 20 0 chr2 73870204 73870254 -179386329 + L2 LINE L2 3194 3244 -28 200 276 35 0 chr2 73870819 73870877 -179385706 + MER5B DNA MER1_type 75 134 -44 321 203 31 0 chr2 73871197 73871261 -179385322 - MIR SINE MIR -98 164 99 343 225 0 0 chr2 73871300 73871371 -179385212 + MER81 DNA DNA 44 114 0 183 184 0 0 chr2 73871455 73871493 -179385090 + (CA)n Simple_repeat Simple_repeat 1 38 0 194 250 62 0 chr2 73872248 73872296 -179384287 + L3 LINE CR1 1513 1563 -14 387 56 0 0 chr2 73872522 73872576 -179384007 + (TG)n Simple_repeat Simple_repeat 2 55 0 890 243 194 9 chr2 73873869 73874198 -179382385 + L2 LINE L2 2919 3308 -5 216 289 24 12 chr2 73874203 73874286 -179382297 + (CACG)n Simple_repeat Simple_repeat 4 87 0 659 246 5 10 chr2 73874845 73875048 -179381535 + L1MA4 LINE L1 5946 6147 -153 2181 111 7 3 chr2 73875110 73875417 -179381166 - AluSp SINE Alu -5 308 1 3024 227 25 44 chr2 73875462 73876454 -179380129 + L1MB3 LINE L1 4818 5828 -355 1968 114 4 4 chr2 73876454 73876726 -179379857 + AluSx SINE Alu 1 272 -40 3024 227 25 44 chr2 73876726 73876739 -179379844 + L1MB3 LINE L1 5828 5840 -343 263 70 0 23 chr2 73876739 73876782 -179379801 + (CAAAA)n Simple_repeat Simple_repeat 5 46 0 3024 227 25 44 chr2 73876782 73876872 -179379711 + L1MB3 LINE L1 5840 5930 -253 2251 131 0 0 chr2 73876872 73877184 -179379399 + AluSx SINE Alu 1 312 0 3024 227 25 44 chr2 73877184 73877448 -179379135 + L1MB3 LINE L1 5930 6153 -30 1197 190 278 5 chr2 73878189 73878849 -179377734 - SATR1 Satellite Satellite -1 840 1 549 196 167 136 chr2 73878898 73879251 -179377332 - SATR1 Satellite Satellite -95 375 12 713 242 162 82 chr2 73879299 73879725 -179376858 - SATR1 Satellite Satellite -4 466 7 1011 218 289 3 chr2 73879776 73880129 -179376454 - SATR1 Satellite Satellite -15 455 2 782 224 308 11 chr2 73880153 73881011 -179375572 - SATR1 Satellite Satellite -3 1112 1 1082 212 287 9 chr2 73881036 73882788 -179373795 - SATR1 Satellite Satellite -2 2238 1 961 202 226 46 chr2 73882804 73883519 -179373064 - SATR1 Satellite Satellite -11 843 1 893 220 244 29 chr2 73883542 73883919 -179372664 - SATR1 Satellite Satellite -1 469 12 716 249 306 4 chr2 73883958 73884906 -179371677 - SATR1 Satellite Satellite -1 1234 1 1475 223 112 36 chr2 73885118 73885963 -179370620 - SATR1 Satellite Satellite 0 909 1 26 88 0 0 chr2 73886012 73886080 -179370503 + AT_rich Low_complexity Low_complexity 1 68 0 277 221 14 43 chr2 73886145 73886285 -179370298 + (TTA)n Simple_repeat Simple_repeat 1 136 0 29773 91 11 14 chr2 73886313 73890398 -179366185 + HERVE LTR ERV1 1108 5178 -2635 2313 172 138 23 chr2 73890401 73892704 -179363879 - SATR1 Satellite Satellite -1 2567 1 1306 211 222 36 chr2 73892717 73893957 -179362626 - SATR1 Satellite Satellite -1 1469 1 1364 118 27 14 chr2 73893959 73894180 -179362403 - AluSq SINE Alu -89 224 1 723 242 40 0 chr2 73896081 73896279 -179360304 + MER6B DNA MER2_type 5 210 0 206 301 51 64 chr2 73896378 73896534 -179360049 + MER5B DNA MER1_type 1 154 -24 1992 135 3 0 chr2 73896695 73896875 -179359708 - AluSp SINE Alu 0 313 130 225 24 71 0 chr2 73896875 73896917 -179359666 + T-rich Low_complexity Low_complexity 2 46 0 1992 135 3 0 chr2 73896917 73897048 -179359535 - AluSp SINE Alu -183 130 1 317 205 122 70 chr2 73897048 73897196 -179359387 - HsTC2 DNA Tc2 -107 1791 1633 1343 207 3 82 chr2 73897238 73897421 -179359162 + L1MA4 LINE L1 5771 5908 -392 1747 146 0 4 chr2 73897421 73897702 -179358881 + AluSx SINE Alu 1 280 -32 1343 207 3 82 chr2 73897702 73897909 -179358674 + L1MA4 LINE L1 5908 6130 -170 2022 117 3 3 chr2 73897989 73898297 -179358286 - AluSp SINE Alu -5 308 1 3121 233 26 40 chr2 73898342 73899334 -179357249 + L1MB3 LINE L1 4818 5822 -361 1860 115 7 4 chr2 73899334 73899612 -179356971 + AluSx SINE Alu 1 279 -33 305 24 24 0 chr2 73899618 73899660 -179356923 + (CAAAA)n Simple_repeat Simple_repeat 5 47 0 3121 233 26 40 chr2 73899660 73899761 -179356822 + L1MB3 LINE L1 5827 5928 -255 1894 151 0 0 chr2 73899761 73900065 -179356518 + AluSx SINE Alu 1 304 -8 3121 233 26 40 chr2 73900065 73900317 -179356266 + L1MB3 LINE L1 5928 6153 -30 305 379 37 5 chr2 73901154 73901368 -179355215 - MIR SINE MIR -10 252 32 2065 116 0 6 chr2 73901761 73902072 -179354511 + AluSg SINE Alu 1 309 -1 191 346 59 0 chr2 73902133 73902234 -179354349 + MIR SINE MIR 30 136 -72 210 339 45 18 chr2 73902472 73902584 -179353999 + L2 LINE L2 3158 3272 0 1961 116 0 10 chr2 73902649 73902951 -179353632 - AluSc SINE Alu -10 299 1 1029 217 231 30 chr2 73904647 73905944 -179350639 - SATR1 Satellite Satellite -144 1557 1 909 251 277 19 chr2 73905964 73906988 -179349595 - SATR1 Satellite Satellite -3 1288 1 228 277 170 9 chr2 73907006 73907118 -179349465 - SATR1 Satellite Satellite -144 326 197 1827 210 100 34 chr2 73907218 73908328 -179348255 - SATR1 Satellite Satellite -20 1182 1 360 236 13 32 chr2 73908450 73908607 -179347976 + (TTA)n Simple_repeat Simple_repeat 1 154 0 223 225 0 28 chr2 73908634 73908705 -179347878 + (TTA)n Simple_repeat Simple_repeat 1 69 0 2289 197 108 16 chr2 73908714 73910967 -179345616 - SATR1 Satellite Satellite -1 2460 1 23 0 0 0 chr2 73910975 73910998 -179345585 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr2 73911017 73911043 -179345540 + AT_rich Low_complexity Low_complexity 1 26 0 377 236 17 23 chr2 73911085 73911259 -179345324 + (TTA)n Simple_repeat Simple_repeat 2 174 0 1758 195 104 13 chr2 73911261 73911895 -179344688 - SATR1 Satellite Satellite 0 691 1 245 213 32 75 chr2 73911899 73911993 -179344590 + LTR2 LTR ERV1 1 90 -359 877 162 6 45 chr2 73912071 73912250 -179344333 + LTR2 LTR ERV1 266 437 -12 485 91 0 39 chr2 73912267 73912344 -179344239 - tRNA-Glu-GAG tRNA tRNA 0 75 2 15341 99 16 8 chr2 73912345 73914478 -179342105 + HERVE LTR ERV1 647 2795 -5018 14984 85 8 24 chr2 73914483 73916529 -179340054 + HERVE LTR ERV1 3164 5178 -2635 2299 168 114 11 chr2 73916532 73917837 -179338746 - SATR1 Satellite Satellite 0 1440 1 2291 185 127 38 chr2 73917876 73919169 -179337414 - SATR1 Satellite Satellite -1 1407 1 1270 197 247 25 chr2 73919210 73920134 -179336449 - SATR1 Satellite Satellite -2 1129 1 1352 116 27 27 chr2 73920216 73920440 -179336143 - AluSq SINE Alu -89 224 1 712 202 72 5 chr2 73922340 73922533 -179334050 + MER6B DNA MER2_type 5 210 0 328 263 39 77 chr2 73922636 73922792 -179333791 - MER5B DNA MER1_type -4 174 25 1882 106 9 100 chr2 73922936 73923277 -179333306 - AluSp SINE Alu -3 310 1 380 266 70 0 chr2 73923282 73923425 -179333158 - HsTC2 DNA Tc2 -115 1783 1631 753 203 16 11 chr2 73923463 73923645 -179332938 + L1MA4 LINE L1 5767 5949 -351 1677 152 0 4 chr2 73923646 73923922 -179332661 + AluSx SINE Alu 1 275 -37 1394 166 37 0 chr2 73926432 73926673 -179329910 + AluJo SINE Alu 17 266 -46 1727 152 95 129 chr2 73927209 73927381 -179329202 + L1MD2 LINE L1 5782 5958 -401 624 136 64 9 chr2 73927381 73927491 -179329092 - FLAM_C SINE Alu -17 116 1 1727 152 95 129 chr2 73927491 73927728 -179328855 + L1MD2 LINE L1 5958 6167 -192 2050 107 10 3 chr2 73927728 73928028 -179328555 + AluSq SINE Alu 1 302 -11 1727 152 95 129 chr2 73928028 73928215 -179328368 + L1MD2 LINE L1 6167 6359 0 1567 186 3 7 chr2 73928224 73928514 -179328069 + AluJo SINE Alu 3 291 -21 830 223 24 34 chr2 73929627 73929833 -179326750 + MER63A DNA MER1_type 1 204 -6 210 245 18 123 chr2 73931368 73931462 -179325121 + MIR SINE MIR 71 143 -119 2106 116 0 0 chr2 73931462 73931756 -179324827 + AluSx SINE Alu 1 294 -18 210 245 18 123 chr2 73931756 73931824 -179324759 + MIR SINE MIR 143 216 -46 2110 88 0 7 chr2 73931837 73932148 -179324435 + AluY SINE Alu 1 309 0 2244 109 3 0 chr2 73932177 73932489 -179324094 - AluSq SINE Alu 0 313 1 1035 211 102 3 chr2 73932580 73932874 -179323709 - MER33 DNA MER1_type 0 324 2 349 283 88 18 chr2 73932946 73933059 -179323524 - MIR SINE MIR -72 190 70 404 267 69 15 chr2 73935185 73935316 -179321267 + MIR3 SINE MIR 64 201 -7 910 302 160 25 chr2 73935363 73935876 -179320707 - L3 LINE CR1 -564 1013 432 262 309 61 101 chr2 73935928 73936274 -179320309 - L2 LINE L2 -20 3252 2921 205 233 0 0 chr2 73936877 73936920 -179319663 + L2 LINE L2 2183 2225 -1089 988 207 55 30 chr2 73936933 73937170 -179319413 + MIR SINE MIR 20 262 0 305 238 201 37 chr2 73938053 73938242 -179318341 + MIR SINE MIR 11 230 -32 180 0 0 0 chr2 73940149 73940169 -179316414 + (CTGGGG)n Simple_repeat Simple_repeat 2 21 0 228 268 155 0 chr2 73940420 73940491 -179316092 + MIR SINE MIR 163 244 -18 2210 93 0 3 chr2 73940538 73940838 -179315745 + AluSx SINE Alu 1 299 -13 688 178 110 0 chr2 73940918 73941064 -179315519 + MER103 DNA DNA 3 164 -2 323 114 49 0 chr2 73941085 73941141 -179315442 + FLAM_A SINE Alu 29 73 -59 1801 118 46 39 chr2 73942862 73943167 -179313416 - AluSx SINE Alu -5 307 1 193 339 71 9 chr2 73945120 73945232 -179311351 - L2 LINE L2 -21 3251 3133 182 236 50 157 chr2 73945350 73945405 -179311178 - MER5A DNA MER1_type -5 184 125 2361 69 0 3 chr2 73945405 73945711 -179310872 + AluY SINE Alu 1 305 -6 182 236 50 157 chr2 73945711 73945795 -179310788 - MER5A DNA MER1_type -64 125 60 1514 180 24 17 chr2 73946588 73946883 -179309700 - AluJo SINE Alu -15 297 1 2024 105 0 11 chr2 73946917 73947309 -179309274 - AluSx SINE Alu 0 389 1 214 339 24 63 chr2 73947535 73947609 -179308974 - L2 LINE L2 -5 3308 3233 2236 86 0 0 chr2 73947609 73947899 -179308684 + AluSc SINE Alu 1 290 -19 214 339 24 63 chr2 73947899 73947910 -179308673 - L2 LINE L2 -80 3233 3223 1622 129 103 4 chr2 73947910 73948182 -179308401 + AluSx SINE Alu 1 299 -13 214 339 24 63 chr2 73948182 73948222 -179308361 - L2 LINE L2 -90 3223 3187 355 257 69 10 chr2 73948482 73948583 -179308000 + L2 LINE L2 3165 3271 -1 232 250 0 0 chr2 73948727 73948771 -179307812 - MIR SINE MIR -8 254 211 1363 247 27 20 chr2 73949898 73950017 -179306566 + L1MB7 LINE L1 5771 5888 -296 1862 127 28 0 chr2 73950017 73950308 -179306275 + AluSx SINE Alu 1 299 -13 1363 247 27 20 chr2 73950308 73950589 -179305994 + L1MB7 LINE L1 5888 6174 -10 187 54 54 0 chr2 73950592 73950629 -179305954 + T-rich Low_complexity Low_complexity 2 40 0 2398 77 115 0 chr2 73950632 73950970 -179305613 + MER51B LTR ERV1 1 377 0 27 0 0 0 chr2 73951160 73951187 -179305396 + AT_rich Low_complexity Low_complexity 1 27 0 3544 53 5 7 chr2 73952266 73952715 -179303868 - LTR7 LTR ERV1 -2 448 1 2526 80 53 13 chr2 73952715 73953092 -179303491 - HERVH LTR ERV1 0 7713 7322 * 19877 92 17 68 chr2 73953090 73956451 -179300132 - HERVH LTR ERV1 -1894 5819 1 3468 67 0 7 chr2 73956453 73956904 -179299679 - LTR7 LTR ERV1 -2 448 1 929 178 0 82 chr2 73956943 73957162 -179299421 + AluJo SINE Alu 11 211 -101 889 210 122 59 chr2 73957167 73957405 -179299178 + MLT1A1 LTR MaLR 109 361 -4 8326 119 140 28 chr2 73957432 73958958 -179297625 - pTR5 LTR ERV1 0 2438 743 827 236 70 0 chr2 73958958 73959157 -179297426 - MER110 LTR ERV1 -233 258 46 1841 140 4 0 chr2 73959247 73959525 -179297058 + AluSg SINE Alu 1 279 -31 834 207 77 134 chr2 73959538 73959988 -179296595 + HAL1 LINE L1 1911 2316 -191 1936 129 0 41 chr2 73959988 73960306 -179296277 - AluSg SINE Alu -5 305 1 834 207 77 134 chr2 73960306 73960482 -179296101 + HAL1 LINE L1 2316 2501 -6 548 151 0 0 chr2 73960552 73960638 -179295945 + MLT1A1 LTR MaLR 280 365 0 248 224 71 47 chr2 73960638 73960712 -179295871 - MER110 LTR ERV1 -215 276 201 2090 101 17 3 chr2 73961313 73961611 -179294972 + AluSx SINE Alu 1 302 -10 234 294 46 20 chr2 73962074 73962227 -179294356 - L1 LINE L1 -2621 3525 3369 441 159 14 0 chr2 73962255 73962355 -179294228 - AluJb SINE Alu 0 313 213 1550 165 0 0 chr2 73962356 73962604 -179293979 - AluJb SINE Alu -64 248 1 342 263 99 73 chr2 73962619 73962851 -179293732 - L1 LINE L1 -2994 3152 2915 508 266 0 0 chr2 73962855 73962983 -179293600 + L1M4 LINE L1 2968 3095 -3051 1952 144 10 0 chr2 73962984 73963290 -179293293 + AluSx SINE Alu 1 309 -3 309 109 0 0 chr2 73963292 73963338 -179293245 + (GGAA)n Simple_repeat Simple_repeat 3 48 0 667 218 18 0 chr2 73963338 73963503 -179293080 + L1M4 LINE L1 3080 3247 -2899 865 264 87 39 chr2 73963557 73963609 -179292974 - MLT1E LTR MaLR -137 456 408 2011 106 3 50 chr2 73963609 73963931 -179292652 - AluSx SINE Alu -5 307 1 865 264 87 39 chr2 73963931 73964211 -179292372 - MLT1E LTR MaLR -185 408 108 498 218 21 7 chr2 73964214 73964356 -179292227 + Charlie2 DNA MER1_type 2465 2608 -254 1231 114 0 6 chr2 73964360 73964568 -179292015 - AluSg/x SINE Alu 0 315 109 847 219 19 23 chr2 73964574 73964830 -179291753 + Charlie2 DNA MER1_type 2608 2862 0 838 110 16 0 chr2 73965322 73965449 -179291134 - AluSg/x SINE Alu -3 307 179 1162 78 0 7 chr2 73967153 73967307 -179289276 - AluY SINE Alu -155 156 4 4985 171 45 40 chr2 73967559 73968014 -179288569 + L1MCa LINE L1 30 481 -5945 2122 112 0 0 chr2 73968014 73968310 -179288273 - AluSg SINE Alu -13 297 2 4985 171 45 40 chr2 73968310 73968865 -179287718 + L1MCa LINE L1 481 1048 -5378 2386 158 44 5 chr2 73968865 73969275 -179287308 + MSTB LTR MaLR 1 426 0 4985 171 45 40 chr2 73969275 73969324 -179287259 + L1MCa LINE L1 1048 1095 -5331 5347 160 101 8 chr2 73969327 73970260 -179286323 + LTR28 LTR ERV1 1 1020 0 477 149 0 0 chr2 73970263 73970337 -179286246 + L1MCa LINE L1 1099 1172 -5254 * 1742 89 27 55 chr2 73970329 73970467 -179286116 + L1M2 LINE L1 5335 5475 -816 1788 123 35 50 chr2 73970467 73970784 -179285799 + AluSx SINE Alu 1 312 0 1818 156 3 3 chr2 73970786 73971081 -179285502 + AluSx SINE Alu 1 295 -17 1742 89 27 55 chr2 73971081 73971232 -179285351 + L1M2 LINE L1 5476 5619 -672 2047 157 57 77 chr2 73971232 73971288 -179285295 - MSTB1 LTR MaLR 0 432 376 610 181 31 16 chr2 73971288 73971415 -179285168 - FLAM_A SINE Alu -4 129 1 2047 157 57 77 chr2 73971415 73971799 -179284784 - MSTB1 LTR MaLR -56 376 1 2556 134 48 38 chr2 73971799 73971977 -179284606 + L1MA7 LINE L1 5615 5790 -381 279 0 0 0 chr2 73971977 73972008 -179284575 + (CA)n Simple_repeat Simple_repeat 2 32 0 2556 134 48 38 chr2 73972008 73972319 -179284264 + L1MA7 LINE L1 5790 6119 -52 23 0 0 0 chr2 73972330 73972353 -179284230 + AT_rich Low_complexity Low_complexity 1 23 0 1924 132 0 3 chr2 73972456 73972745 -179283838 - AluSx SINE Alu -24 288 1 1926 154 0 0 chr2 73972899 73973197 -179283386 - AluJb SINE Alu -14 298 1 1678 225 105 32 chr2 73973767 73974862 -179281721 - L1MDa LINE L1 -3183 3357 2138 208 147 0 0 chr2 73975702 73975736 -179280847 + (TA)n Simple_repeat Simple_repeat 2 35 0 383 361 89 26 chr2 73976076 73976345 -179280238 - L3b LINE CR1 -4 1579 1294 247 298 99 25 chr2 73976369 73976490 -179280093 + MIR SINE MIR 126 255 -7 2175 241 86 9 chr2 73977321 73977902 -179278681 - L1MDa LINE L1 -5731 990 365 513 290 22 52 chr2 73977960 73978047 -179278536 - L1M4c LINE L1 -4883 1501 1413 2150 97 0 3 chr2 73978047 73978337 -179278246 - AluSc SINE Alu -17 292 4 2244 99 0 3 chr2 73978339 73978642 -179277941 - AluSx SINE Alu -10 302 1 513 290 22 52 chr2 73978642 73978875 -179277708 - L1M4c LINE L1 -4972 1412 1188 501 229 18 0 chr2 73978875 73978984 -179277599 + MLT1C LTR MaLR 357 467 0 2939 189 121 103 chr2 73978984 73980087 -179276496 + L1MC3 LINE L1 6394 7523 -262 1178 119 6 11 chr2 73980087 73980264 -179276319 + L1PA10 LINE L1 5993 6168 0 2939 189 121 103 chr2 73980264 73980428 -179276155 + L1MC3 LINE L1 7523 7683 -102 522 275 124 69 chr2 73980449 73980813 -179275770 + L1MC5 LINE L1 7527 7910 -51 1636 164 25 4 chr2 73981014 73981295 -179275288 + AluJo SINE Alu 2 288 -24 1767 77 24 12 chr2 73981630 73981877 -179274706 + L1PA7 LINE L1 5901 6150 -4 2176 63 31 7 chr2 73981991 73982278 -179274305 - AluY SINE Alu -17 294 1 188 67 33 0 chr2 73982310 73982340 -179274243 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 2128 83 31 0 chr2 73982454 73982744 -179273839 - AluSx SINE Alu -13 299 1 181 262 48 68 chr2 73982744 73982756 -179273827 + L2 LINE L2 2353 2364 -950 223 316 26 0 chr2 73982756 73982832 -179273751 + MIR SINE MIR 89 166 -96 315 275 88 44 chr2 73983454 73983636 -179272947 - L1ME4a LINE L1 -2 6119 5930 1887 143 39 45 chr2 73984345 73984703 -179271880 - MLT1A1 LTR MaLR 0 365 10 1498 170 141 3 chr2 73985063 73985369 -179271214 - MER7A DNA MER2_type 0 346 1 261 197 61 15 chr2 73985540 73985606 -179270977 + L2 LINE L2 3157 3225 -47 1584 177 10 7 chr2 73985677 73985971 -179270612 + AluJo SINE Alu 1 295 -17 2035 119 14 0 chr2 73986644 73986937 -179269646 - AluSx SINE Alu -13 299 3 728 238 78 74 chr2 73986982 73987287 -179269296 + MLT1J LTR MaLR 20 293 -153 592 279 119 22 chr2 73987812 73988038 -179268545 + MIR SINE MIR 7 254 -8 1647 154 0 32 chr2 73988038 73988323 -179268260 - AluJb SINE Alu -19 293 18 2249 97 57 26 chr2 73988323 73988673 -179267910 - THE1B LTR MaLR -2 362 2 328 339 85 33 chr2 73988722 73989052 -179267531 + L2 LINE L2 2926 3272 0 2238 100 3 6 chr2 73989115 73989426 -179267157 + AluSx SINE Alu 1 310 -2 1669 90 3 107 chr2 73990915 73991073 -179265510 - AluSq SINE Alu -43 270 97 288 111 0 0 chr2 73991073 73991118 -179265465 + (TA)n Simple_repeat Simple_repeat 1 45 0 2054 100 7 0 chr2 73991118 73991408 -179265175 - AluSx SINE Alu -16 296 5 1669 90 3 107 chr2 73991408 73991538 -179265045 - AluSq SINE Alu -214 99 11 188 282 77 68 chr2 73991666 73991783 -179264800 - MIR SINE MIR 0 262 145 1129 159 10 15 chr2 73991860 73992055 -179264528 - AluJb SINE Alu -118 194 1 297 185 59 101 chr2 73992057 73992132 -179264451 + L1MB5 LINE L1 6048 6117 -68 2153 114 0 0 chr2 73992132 73992431 -179264152 - AluSg SINE Alu -11 299 1 297 185 59 101 chr2 73992431 73992498 -179264085 + L1MB5 LINE L1 6117 6185 0 501 152 45 18 chr2 73992676 73992788 -179263795 - L1MA9 LINE L1 0 6312 6198 463 179 38 8 chr2 73993400 73993527 -179263056 - L1MB7 LINE L1 0 6178 6053 2148 92 7 0 chr2 73993536 73993831 -179262752 - AluSx SINE Alu -15 297 1 1183 146 52 34 chr2 73994203 73994436 -179262147 + L1M3 LINE L1 5586 5822 -361 1440 74 0 0 chr2 73994436 73994625 -179261958 - AluSp SINE Alu -14 299 111 2060 82 18 4 chr2 73994625 73994905 -179261678 + AluSx SINE Alu 14 297 -15 673 288 201 19 chr2 73997381 73997407 -179259176 + L2 LINE L2 2353 2373 -940 1496 183 45 89 chr2 73997407 73997878 -179258705 - LTR7 LTR ERV1 0 450 1 673 288 201 19 chr2 73997878 73998462 -179258121 + L2 LINE L2 2373 3068 -245 1776 168 7 0 chr2 74000790 74001088 -179255495 + AluJo SINE Alu 1 300 -12 2039 108 0 3 chr2 74001170 74001465 -179255118 + AluSx SINE Alu 2 295 -17 2363 89 0 6 chr2 74001596 74001909 -179254674 - AluSq SINE Alu -1 312 2 1576 171 30 7 chr2 74002145 74002444 -179254139 + AluJo SINE Alu 1 306 -6 423 0 0 0 chr2 74002819 74002866 -179253717 + (CA)n Simple_repeat Simple_repeat 2 48 0 318 272 129 44 chr2 74002999 74003271 -179253312 + L1M4 LINE L1 3874 4168 -1978 2050 130 7 0 chr2 74003283 74003584 -179252999 + AluJb SINE Alu 2 304 -8 306 114 19 13 chr2 74003753 74003814 -179252769 + Alu SINE Alu 1 38 -265 1418 70 30 25 chr2 74003814 74004013 -179252570 + AluSg/x SINE Alu 100 299 -13 1801 130 13 30 chr2 74004658 74004959 -179251624 + AluSq SINE Alu 1 296 -17 597 324 38 3 chr2 74004972 74005259 -179251324 - L1MC4 LINE L1 -27 8015 7719 839 176 100 0 chr2 74005484 74005654 -179250929 - MER5A DNA MER1_type -2 187 1 2012 128 144 24 chr2 74006115 74006497 -179250086 - MSTC LTR MaLR 0 428 1 257 168 50 20 chr2 74006958 74007059 -179249524 + (TAA)n Simple_repeat Simple_repeat 1 104 0 2128 122 0 6 chr2 74007653 74007964 -179248619 + AluSx SINE Alu 1 309 -3 2065 95 34 3 chr2 74009040 74009336 -179247247 - AluSc SINE Alu -4 305 1 3048 198 67 25 chr2 74009363 74010050 -179246533 - L1MB5 LINE L1 0 6174 5459 459 244 137 0 chr2 74010821 74010952 -179245631 - MIR SINE MIR -7 255 107 212 282 155 0 chr2 74011215 74011286 -179245297 + MIR SINE MIR 33 114 -94 2246 109 0 6 chr2 74012229 74012542 -179244041 - AluSx SINE Alu 0 312 2 2327 85 0 0 chr2 74013298 74013604 -179242979 + AluY SINE Alu 2 307 -4 1347 209 80 46 chr2 74016846 74017195 -179239388 - MLT1A1 LTR MaLR -4 361 1 2860 184 93 9 chr2 74017200 74017761 -179238822 - MLT1A1-int LTR MaLR 0 1735 1128 1585 253 190 30 chr2 74017785 74018523 -179238060 + L2 LINE L2 1955 2810 -504 1073 192 6 0 chr2 74018558 74018740 -179237843 + MER58A DNA MER1_type 42 224 0 211 281 12 24 chr2 74018765 74018847 -179237736 + L2 LINE L2 2853 2933 -339 2105 95 0 14 chr2 74018847 74019142 -179237441 - AluSc SINE Alu -18 291 1 518 169 10 6 chr2 74019148 74019256 -179237327 - L1ME2 LINE L1 -1 6333 6068 234 88 29 0 chr2 74019268 74019302 -179237281 - MER3 DNA MER1_type -160 49 15 400 274 73 73 chr2 74020610 74020814 -179235769 + MLT1L LTR MaLR 5 208 -407 310 312 21 28 chr2 74021655 74021796 -179234787 - L2 LINE L2 -925 2389 2250 468 246 46 0 chr2 74022987 74023117 -179233466 - MIR3 SINE MIR -34 174 39 1541 144 117 72 chr2 74023677 74024106 -179232477 - LTR7 LTR ERV1 -2 448 1 2685 60 45 13 chr2 74024106 74024486 -179232097 - HERVH LTR ERV1 0 7713 7322 1399 115 23 9 chr2 74024484 74024701 -179231882 - HERVH LTR ERV1 -1894 5819 5600 * 4378 148 3 1 chr2 74024702 74025363 -179231220 - HERVH LTR ERV1 -2564 5149 4488 3424 119 4 6 chr2 74025365 74025868 -179230715 - HERVH LTR ERV1 -3720 3993 3492 3236 87 4 15 chr2 74025858 74026317 -179230266 - HERVH LTR ERV1 -4423 3290 2837 * 9458 28 1 178 chr2 74026325 74027944 -179228639 + SVA Other Other 1 1333 -53 6687 54 5 50 chr2 74028778 74029984 -179226599 + SVA Other Other 432 1396 0 16592 91 32 21 chr2 74029990 74032605 -179223978 - HERVH LTR ERV1 -4606 3113 437 2603 111 8 8 chr2 74032583 74032979 -179223604 - HERVH LTR ERV1 -3795 3918 3523 * 1558 142 117 72 chr2 74032997 74033426 -179223157 - LTR7 LTR ERV1 -2 448 1 359 257 270 0 chr2 74033720 74033868 -179222715 - MER5A DNA MER1_type -1 188 1 270 207 243 9 chr2 74033901 74034012 -179222571 - MIR SINE MIR -94 168 32 219 256 58 12 chr2 74034417 74034503 -179222080 + MIR3 SINE MIR 81 170 -38 2050 120 0 17 chr2 74035562 74035861 -179220722 + AluSx SINE Alu 1 294 -18 902 280 63 24 chr2 74035862 74036146 -179220437 + L1M4 LINE L1 4155 4469 -1677 1420 185 39 86 chr2 74036146 74036529 -179220054 + MLT1A1 LTR MaLR 1 365 0 902 280 63 24 chr2 74036529 74036748 -179219835 + L1M4 LINE L1 4469 4678 -1468 1124 230 113 7 chr2 74036807 74036826 -179219757 + LTR16C LTR ERVL 180 196 -295 2562 189 27 30 chr2 74036826 74037386 -179219197 + MER74A LTR ERVL 1 558 0 1124 230 113 7 chr2 74037386 74037640 -179218943 + LTR16C LTR ERVL 196 482 -9 2422 72 0 0 chr2 74037661 74037967 -179218616 - AluY SINE Alu -5 306 1 822 276 22 54 chr2 74038043 74038380 -179218203 + L1M4 LINE L1 4741 5087 -1059 1663 186 50 39 chr2 74038380 74038741 -179217842 - MLT1A1 LTR MaLR 0 365 1 822 276 22 54 chr2 74038741 74038777 -179217806 + L1M4 LINE L1 5087 5123 -1023 1667 172 17 14 chr2 74038777 74038889 -179217694 + AluJo SINE Alu 1 111 -201 222 37 0 0 chr2 74038889 74038916 -179217667 + (TC)n Simple_repeat Simple_repeat 2 28 0 1667 172 17 14 chr2 74038916 74038929 -179217654 + AluJo SINE Alu 111 122 -190 330 87 0 0 chr2 74038929 74038975 -179217608 + (TG)n Simple_repeat Simple_repeat 1 46 0 1667 172 17 14 chr2 74038975 74039139 -179217444 + AluJo SINE Alu 122 292 -20 822 276 22 54 chr2 74039139 74039224 -179217359 + L1M4 LINE L1 5123 5185 -961 649 244 15 79 chr2 74039382 74039438 -179217145 - L1MC4a LINE L1 -1879 5929 5871 1781 174 3 0 chr2 74039438 74039731 -179216852 - AluJo SINE Alu -18 294 1 649 244 15 79 chr2 74039731 74039940 -179216643 - L1MC4a LINE L1 -1937 5871 5681 737 171 24 0 chr2 74040232 74040355 -179216228 - MER20 DNA MER1_type -24 195 70 1897 143 0 11 chr2 74041357 74041671 -179214912 + AluJb SINE Alu 8 318 0 2167 91 4 0 chr2 74041748 74042023 -179214560 + AluSx SINE Alu 1 276 -36 300 200 0 0 chr2 74042395 74042470 -179214113 + GA-rich Low_complexity Low_complexity 2 76 0 945 209 24 51 chr2 74042569 74042823 -179213760 + MLT1A2 LTR MaLR 128 374 0 369 247 12 0 chr2 74043097 74043182 -179213401 - MER5B DNA MER1_type -69 109 24 2088 189 48 14 chr2 74043218 74043715 -179212868 + MER77 LTR ERV1 41 605 0 380 253 32 0 chr2 74043743 74043861 -179212722 - MER5A DNA MER1_type -50 139 8 186 43 0 0 chr2 74044474 74044497 -179212086 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 314 232 49 12 chr2 74044500 74044582 -179212001 + L2 LINE L2 3229 3313 0 440 250 93 8 chr2 74044832 74045003 -179211580 - MIR3 SINE MIR -60 148 10 338 289 99 0 chr2 74045623 74045744 -179210839 + MIR3 SINE MIR 58 190 -18 948 121 134 0 chr2 74046236 74046385 -179210198 - MSTA LTR MaLR 0 428 260 212 254 62 100 chr2 74047512 74047642 -179208941 - MER5A DNA MER1_type -5 184 60 21 0 0 0 chr2 74048501 74048522 -179208061 + AT_rich Low_complexity Low_complexity 1 21 0 2374 87 0 3 chr2 74048524 74048823 -179207760 + AluSg SINE Alu 1 298 -12 1865 163 10 3 chr2 74048823 74049118 -179207465 - AluJo SINE Alu -15 297 1 202 303 45 30 chr2 74049364 74049430 -179207153 - L2 LINE L2 -3 3269 3203 259 203 101 0 chr2 74049450 74049519 -179207064 + L1ME3A LINE L1 6092 6167 -3 230 200 0 0 chr2 74050214 74050254 -179206329 - MIR SINE MIR -12 250 211 1488 226 67 3 chr2 74051374 74051763 -179204820 + L1MB7 LINE L1 5771 6184 0 1829 148 0 58 chr2 74053083 74053408 -179203175 + AluJo SINE Alu 3 308 -4 2201 75 23 39 chr2 74056820 74057127 -179199456 - AluSx SINE Alu -10 302 1 1650 168 0 41 chr2 74057952 74058268 -179198315 + AluJo SINE Alu 1 303 -9 1394 127 34 63 chr2 74060029 74060297 -179196286 + Tigger1 DNA MER2_type 3 262 -2156 19891 165 21 15 chr2 74060298 74061388 -179195195 - L1PA14 LINE L1 -37 7562 6480 2037 87 65 4 chr2 74061388 74061665 -179194918 + AluY SINE Alu 1 294 -17 19891 165 21 15 chr2 74061665 74062275 -179194308 - L1PA14 LINE L1 -1119 6480 5875 360 0 0 0 chr2 74062275 74062315 -179194268 + (TG)n Simple_repeat Simple_repeat 1 40 0 19891 165 21 15 chr2 74062315 74063468 -179193115 - L1PA14 LINE L1 -1724 5875 4730 2125 114 7 0 chr2 74063468 74063758 -179192825 - AluSx SINE Alu -20 292 1 19891 165 21 15 chr2 74063758 74065417 -179191166 - L1PA14 LINE L1 -2869 4730 3082 2458 118 19 45 chr2 74065417 74065791 -179190792 - THE1B LTR MaLR 0 364 1 19891 165 21 15 chr2 74065791 74065951 -179190632 - L1PA14 LINE L1 -4517 3082 2924 2146 102 7 20 chr2 74065951 74066108 -179190475 - AluSq SINE Alu -23 290 137 2748 23 0 0 chr2 74066108 74066407 -179190176 - AluY SINE Alu -12 299 1 2146 102 7 20 chr2 74066407 74066543 -179190040 - AluSq SINE Alu -176 137 1 19891 165 21 15 chr2 74066543 74066789 -179189794 - L1PA14 LINE L1 -4675 2924 2603 600 108 0 32 chr2 74066789 74066882 -179189701 + Tigger1 DNA MER2_type 1863 1952 -466 278 243 42 83 chr2 74067033 74067177 -179189406 - L1ME4a LINE L1 -3 6118 5981 1290 59 0 0 chr2 74067392 74067545 -179189038 - AluY SINE Alu -14 297 145 737 213 0 0 chr2 74067568 74067690 -179188893 + FLAM_A SINE Alu 1 122 -11 1961 164 0 0 chr2 74068293 74068605 -179187978 + AluSx SINE Alu 1 312 0 372 88 0 0 chr2 74068821 74068878 -179187705 + (TG)n Simple_repeat Simple_repeat 2 58 0 2160 119 10 0 chr2 74069204 74069498 -179187085 - AluSx SINE Alu -15 297 1 378 286 133 14 chr2 74071173 74071531 -179185052 - L1ME4a LINE L1 -452 5669 5265 50 59 0 0 chr2 74071533 74071618 -179184965 + AT_rich Low_complexity Low_complexity 1 85 0 221 186 0 23 chr2 74072848 74072891 -179183692 + GA-rich Low_complexity Low_complexity 2 43 0 241 274 80 44 chr2 74073562 74073675 -179182908 + HAL1 LINE L1 1381 1497 -1010 1045 204 57 13 chr2 74073723 74073953 -179182630 + MLT1F1 LTR MaLR 328 567 0 1739 294 91 67 chr2 74074821 74075959 -179180624 - L2 LINE L2 0 3272 2105 2102 117 3 23 chr2 74075959 74076258 -179180325 + AluSx SINE Alu 1 293 -19 1739 294 91 67 chr2 74076258 74076354 -179180229 - L2 LINE L2 -1167 2105 2013 1638 185 152 51 chr2 74076397 74076845 -179179738 + MLT1D LTR MaLR 13 505 0 729 280 105 24 chr2 74076868 74077239 -179179344 - L2 LINE L2 -1345 1969 1569 2300 91 0 7 chr2 74077646 74077942 -179178641 - AluY SINE Alu -17 294 1 2186 94 3 39 chr2 74078782 74079089 -179177494 + AluSq SINE Alu 1 296 -17 234 301 142 9 chr2 74079129 74079242 -179177341 - MER5A DNA MER1_type -1 188 61 21 0 0 0 chr2 74079925 74079946 -179176637 + AT_rich Low_complexity Low_complexity 1 21 0 892 135 32 0 chr2 74080445 74080571 -179176012 - AluJb SINE Alu -182 130 1 1775 156 10 7 chr2 74080573 74080868 -179175715 - AluJo SINE Alu -16 296 1 233 221 52 52 chr2 74081709 74081786 -179174797 - MIR SINE MIR -43 219 143 721 159 18 9 chr2 74081835 74081948 -179174635 - FLAM_C SINE Alu -19 124 11 277 306 35 12 chr2 74081965 74082050 -179174533 - MIR SINE MIR -163 99 13 1063 232 76 20 chr2 74082342 74082644 -179173939 + MER46C DNA MER2_type 2 320 -18 533 123 0 0 chr2 74083060 74083133 -179173450 + AluS SINE Alu 228 300 -12 224 304 17 61 chr2 74083160 74083275 -179173308 - MER5B DNA MER1_type -66 112 3 23 54 0 0 chr2 74083610 74083647 -179172936 + AT_rich Low_complexity Low_complexity 1 37 0 1043 129 7 7 chr2 74084393 74084548 -179172035 + MER5A DNA MER1_type 2 156 -33 2132 91 7 30 chr2 74084964 74085260 -179171323 - AluSx SINE Alu -23 289 1 1494 190 15 11 chr2 74085603 74085877 -179170706 + AluJo SINE Alu 1 275 -37 27 29 0 0 chr2 74086125 74086159 -179170424 + AT_rich Low_complexity Low_complexity 1 34 0 458 243 168 53 chr2 74086159 74086517 -179170066 + L1ME LINE L1 5305 5701 -461 242 224 13 26 chr2 74086542 74086618 -179169965 + L1ME LINE L1 5798 5872 -249 2530 61 0 46 chr2 74086721 74087047 -179169536 - AluY SINE Alu 0 311 1 774 232 89 62 chr2 74087596 74087954 -179168629 - L1MC4a LINE L1 -1750 6058 5691 761 114 68 61 chr2 74088474 74088606 -179167977 - AluJo SINE Alu -178 134 2 340 287 29 37 chr2 74089115 74089251 -179167332 + L2 LINE L2 2926 3060 -212 274 305 0 0 chr2 74089292 74089351 -179167232 - L2 LINE L2 -92 3180 3122 958 186 123 16 chr2 74089571 74089823 -179166760 + LTR12 LTR ERV1 1 279 -435 327 198 42 31 chr2 74089824 74089920 -179166663 + LTR30 LTR ERV1 547 643 -79 688 129 0 0 chr2 74089921 74090022 -179166561 + LTR12 LTR ERV1 614 714 0 311 262 37 28 chr2 74090513 74090620 -179165963 - MIR SINE MIR -119 143 36 192 256 0 0 chr2 74090812 74090855 -179165728 + L2 LINE L2 2237 2279 -1035 220 311 14 95 chr2 74090864 74090948 -179165635 + L2 LINE L2 3137 3226 -46 2007 145 7 0 chr2 74090948 74091252 -179165331 + AluSq SINE Alu 1 306 -7 2166 115 3 7 chr2 74091259 74091554 -179165029 - AluSg1 SINE Alu -15 294 1 220 311 14 95 chr2 74091554 74091609 -179164974 + L2 LINE L2 3232 3272 0 572 271 31 0 chr2 74091734 74091863 -179164720 - MER82 DNA MER2_type 0 653 521 390 296 67 28 chr2 74091952 74092131 -179164452 + MIR SINE MIR 2 187 -75 493 242 0 0 chr2 74092164 74092259 -179164324 - MER82 DNA MER2_type -557 96 2 192 317 50 0 chr2 74092548 74092608 -179163975 + L2 LINE L2 3109 3171 -101 806 160 0 32 chr2 74092857 74092868 -179163715 - FLAM_A SINE Alu -181 121 111 183 80 0 0 chr2 74092868 74092893 -179163690 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 806 160 0 32 chr2 74092893 74093006 -179163577 - FLAM_A SINE Alu -191 111 1 2252 90 0 0 chr2 74095592 74095881 -179160702 + AluSg SINE Alu 1 289 -21 2341 114 146 11 chr2 74096150 74096527 -179160056 + MSTA LTR MaLR 1 428 0 770 248 78 42 chr2 74096561 74096868 -179159715 - L2 LINE L2 -4 3309 2992 251 152 22 0 chr2 74096931 74096977 -179159606 - L1M4 LINE L1 -3656 2490 2444 186 308 33 22 chr2 74097371 74097462 -179159121 - L2 LINE L2 -228 3085 2994 294 160 13 29 chr2 74097478 74097556 -179159027 + L1MCa LINE L1 1505 1613 -4815 4523 142 64 69 chr2 74097753 74098514 -179158069 - L1MB3 LINE L1 -4 6179 5418 1674 181 14 0 chr2 74098514 74098807 -179157776 - AluJo SINE Alu -10 302 6 4523 142 64 69 chr2 74098807 74099052 -179157531 - L1MB3 LINE L1 -765 5418 5173 1178 250 57 40 chr2 74099617 74099803 -179156780 + HAL1 LINE L1 617 798 -1709 1711 198 0 16 chr2 74099803 74100111 -179156472 - AluJo SINE Alu -9 303 1 1178 250 57 40 chr2 74100111 74100380 -179156203 + HAL1 LINE L1 798 1080 -1427 590 263 88 44 chr2 74100453 74100596 -179155987 - MLT1J LTR MaLR -243 268 110 5743 142 28 62 chr2 74100596 74101705 -179154878 - MER11C LTR ERVK 0 1071 1 590 263 88 44 chr2 74101705 74101789 -179154794 - MLT1J LTR MaLR -401 110 31 338 227 10 62 chr2 74101798 74101895 -179154688 + HAL1 LINE L1 1103 1194 -1313 638 231 35 7 chr2 74102039 74102182 -179154401 - MIR SINE MIR 0 262 116 1093 198 99 65 chr2 74102232 74102537 -179154046 - LTR52 LTR ERVL -54 367 46 2157 113 0 0 chr2 74102537 74102848 -179153735 + AluSx SINE Alu 1 311 0 1093 198 99 65 chr2 74102848 74102894 -179153689 - LTR52 LTR ERVL -375 46 3 1493 181 17 7 chr2 74102930 74103222 -179153361 + HAL1 LINE L1 1420 1714 -793 1105 260 147 28 chr2 74103229 74103295 -179153288 + MER74B LTR ERVL 56 113 -509 1591 147 33 49 chr2 74103295 74103601 -179152982 + AluJb SINE Alu 1 301 -11 1105 260 147 28 chr2 74103601 74103991 -179152592 + MER74B LTR ERVL 113 566 -56 424 273 133 45 chr2 74104045 74104331 -179152252 + HAL1 LINE L1 1712 2022 -485 716 247 128 43 chr2 74104409 74104567 -179152016 - MIR SINE MIR 0 262 76 2804 169 34 20 chr2 74104567 74105063 -179151520 - MLT1D LTR MaLR 0 505 3 716 247 128 43 chr2 74105063 74105139 -179151444 - MIR SINE MIR -186 76 8 333 267 0 0 chr2 74105153 74105239 -179151344 + HAL1 LINE L1 2119 2204 -303 368 243 116 42 chr2 74105422 74105509 -179151074 + HAL1 LINE L1 2299 2378 -129 2216 105 0 10 chr2 74105509 74105814 -179150769 + AluSp SINE Alu 2 303 -10 368 243 116 42 chr2 74105814 74105915 -179150668 + HAL1 LINE L1 2378 2501 -6 934 261 65 48 chr2 74106543 74106653 -179149930 + MLT1I LTR MaLR 48 155 -254 2302 91 3 10 chr2 74106653 74106960 -179149623 - AluSq SINE Alu -8 305 1 934 261 65 48 chr2 74106960 74107205 -179149378 + MLT1I LTR MaLR 155 409 0 2200 102 28 0 chr2 74110046 74110330 -179146253 + AluSg SINE Alu 1 292 -18 241 296 101 42 chr2 74110499 74110786 -179145797 + L1MC4 LINE L1 7699 8002 -40 350 361 50 22 chr2 74111981 74112161 -179144422 - L2 LINE L2 -5 3267 3083 298 278 7 43 chr2 74112473 74112589 -179143994 + MIR SINE MIR 53 148 -60 37916 90 14 9 chr2 74112943 74113321 -179143262 - L1PA6 LINE L1 0 6154 5779 2581 71 0 0 chr2 74113321 74113630 -179142953 - AluY SINE Alu -2 309 1 37916 90 14 9 chr2 74113630 74119372 -179137211 - L1PA6 LINE L1 -375 5779 11 5498 119 19 1 chr2 74119388 74120192 -179136391 - L1PA15 LINE L1 -3 6162 5345 260 278 123 27 chr2 74120198 74120385 -179136198 - L1ME LINE L1 -298 5823 5619 710 215 65 0 chr2 74120738 74120924 -179135659 - L2 LINE L2 -972 2342 2145 * 845 255 110 81 chr2 74120923 74121264 -179135319 + L2 LINE L2 2878 3235 -78 1626 271 71 19 chr2 74121264 74121729 -179134854 - LTR16C LTR ERVL 0 491 3 845 255 110 81 chr2 74121729 74121806 -179134777 + L2 LINE L2 3235 3308 -5 466 116 0 58 chr2 74121834 74121903 -179134680 - AluS SINE Alu -246 66 2 1013 272 110 73 chr2 74122175 74122253 -179134330 + MLT1G1 LTR MaLR 1 75 -520 2339 117 0 0 chr2 74122253 74122561 -179134022 - AluSx SINE Alu -4 308 1 1013 272 110 73 chr2 74122561 74123056 -179133527 + MLT1G1 LTR MaLR 75 595 0 931 358 103 16 chr2 74123239 74123546 -179133037 - L2 LINE L2 -622 2692 2413 2479 85 3 0 chr2 74123546 74123853 -179132730 + AluSp SINE Alu 1 308 -5 931 358 103 16 chr2 74123853 74124315 -179132268 - L2 LINE L2 -901 2413 1856 699 223 51 25 chr2 74124501 74124698 -179131885 + MIR SINE MIR 2 203 -59 185 150 0 25 chr2 74124710 74124750 -179131833 + (TTA)n Simple_repeat Simple_repeat 1 39 0 2096 180 74 30 chr2 74124805 74125306 -179131277 + Charlie1b DNA MER1_type 1 523 0 1560 227 107 54 chr2 74126008 74126523 -179130060 - MLT1F1 LTR MaLR 0 567 1 368 320 24 16 chr2 74126525 74126650 -179129933 - MIR SINE MIR -120 142 17 1000 147 144 123 chr2 74127118 74127403 -179129180 - AluJo SINE Alu -11 291 1 2275 91 3 0 chr2 74127958 74128275 -179128308 + AluSp SINE Alu 6 313 0 547 128 0 0 chr2 74128346 74128424 -179128159 - AluSg/x SINE Alu -17 293 216 2484 83 0 0 chr2 74128445 74128757 -179127826 + AluSq SINE Alu 1 312 -1 224 322 11 0 chr2 74129513 74129600 -179126983 + MIR SINE MIR 53 140 -68 1971 156 0 3 chr2 74129809 74130110 -179126473 + AluJb SINE Alu 1 300 -12 1648 163 74 0 chr2 74130532 74130815 -179125768 - AluJb SINE Alu -8 304 1 2167 112 10 3 chr2 74131764 74132068 -179124515 - AluSx SINE Alu -6 306 1 1732 173 47 24 chr2 74132071 74132112 -179124471 - L1M4 LINE L1 -512 5672 5633 662 143 83 0 chr2 74132112 74132245 -179124338 - L1MB8 LINE L1 -2 6176 6033 1732 173 47 24 chr2 74132245 74132373 -179124210 - L1M4 LINE L1 -551 5633 5509 1975 195 37 18 chr2 74132373 74132753 -179123830 - MLT1B LTR MaLR 0 390 4 1732 173 47 24 chr2 74132753 74132923 -179123660 - L1M4 LINE L1 -675 5509 5324 189 0 0 0 chr2 74132925 74132946 -179123637 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 774 154 25 6 chr2 74132947 74133109 -179123474 + CT-rich Low_complexity Low_complexity 4 168 0 1392 165 71 64 chr2 74133112 74133335 -179123248 - AluSx SINE Alu -13 299 72 13440 27 7 0 chr2 74133335 74135597 -179120986 - L1PA4 LINE L1 -3 6152 3879 1392 165 71 64 chr2 74135597 74135670 -179120913 - AluSx SINE Alu -240 72 1 243 133 44 0 chr2 74135736 74135781 -179120802 + LTR66 LTR ERVL 392 438 -172 1622 160 41 4 chr2 74135966 74136235 -179120348 + AluJb SINE Alu 1 279 -33 216 0 0 0 chr2 74136238 74136262 -179120321 + (TAA)n Simple_repeat Simple_repeat 2 25 0 180 152 0 0 chr2 74136348 74136381 -179120202 + (TA)n Simple_repeat Simple_repeat 2 34 0 15801 174 36 24 chr2 74136847 74137869 -179118714 + L1PA12 LINE L1 10 1018 -6566 2436 87 0 0 chr2 74137869 74138168 -179118415 - AluSc SINE Alu -10 299 1 15801 174 36 24 chr2 74138168 74139210 -179117373 + L1PA12 LINE L1 1018 2045 -5539 2473 78 0 0 chr2 74139210 74139506 -179117077 + AluY SINE Alu 1 296 -15 15801 174 36 24 chr2 74139506 74141496 -179115087 + L1PA12 LINE L1 2045 4008 -3576 1971 145 0 3 chr2 74141496 74141824 -179114759 + AluSx SINE Alu 1 327 0 15801 174 36 24 chr2 74141824 74142874 -179113709 + L1PA12 LINE L1 4008 6269 -1315 4828 77 6 8 chr2 74142874 74143525 -179113058 + L1PA8 LINE L1 5514 6171 -1 359 122 215 0 chr2 74143648 74143743 -179112840 - AluJb SINE Alu -43 259 172 247 298 113 32 chr2 74143985 74144109 -179112474 + L2 LINE L2 3119 3252 -20 306 298 46 87 chr2 74144242 74144635 -179111948 - L1M2 LINE L1 -5821 1028 652 283 137 20 0 chr2 74145219 74145270 -179111313 + MER31A LTR ERV1 353 404 -81 21 0 0 0 chr2 74146781 74146802 -179109781 + AT_rich Low_complexity Low_complexity 1 21 0 24 85 0 0 chr2 74147279 74147338 -179109245 + AT_rich Low_complexity Low_complexity 1 59 0 455 312 151 13 chr2 74147338 74147636 -179108947 - L1MC4a LINE L1 -1645 6163 5825 2075 125 0 29 chr2 74147720 74148033 -179108550 + AluSx SINE Alu 1 304 -8 24 0 0 0 chr2 74148161 74148185 -179108398 + AT_rich Low_complexity Low_complexity 1 24 0 663 282 48 33 chr2 74148185 74148582 -179108001 - HAL1 LINE L1 0 2507 2105 568 241 0 0 chr2 74148771 74148929 -179107654 + HAL1 LINE L1 970 1127 -1380 1778 221 109 32 chr2 74148950 74149727 -179106856 - HAL1 LINE L1 -701 1806 970 3054 154 44 11 chr2 74149887 74150431 -179106152 - MER68 LTR ERV1 0 562 1 468 161 336 7 chr2 74150678 74150990 -179105593 + Charlie1 DNA MER1_type 80 2755 -6 1414 184 31 31 chr2 74151099 74151453 -179105130 - LTR37A LTR ERV1 -72 354 1 25 0 0 0 chr2 74151657 74151682 -179104901 + AT_rich Low_complexity Low_complexity 1 25 0 1868 81 25 18 chr2 74151682 74151966 -179104617 - L1MA1 LINE L1 -4 6298 6013 664 274 79 20 chr2 74152336 74152588 -179103995 + MLT1F LTR MaLR 7 273 -269 350 233 113 8 chr2 74152584 74152717 -179103866 + MLT1J LTR MaLR 66 212 -299 * 636 191 57 42 chr2 74152720 74152953 -179103630 - MER106B DNA MER1_type -4 1055 1 1335 229 69 0 chr2 74153252 74153645 -179102938 + L1 LINE L1 4419 4838 -1308 1627 104 49 77 chr2 74153961 74154125 -179102458 - AluJo SINE Alu -14 298 144 2278 125 0 0 chr2 74154125 74154437 -179102146 - AluSx SINE Alu 0 312 1 1627 104 49 77 chr2 74154437 74154559 -179102024 - AluJo SINE Alu -168 144 20 186 43 0 0 chr2 74154740 74154763 -179101820 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1632 180 0 24 chr2 74154971 74155260 -179101323 + AluJb SINE Alu 1 282 -30 2082 263 102 118 chr2 74155415 74155938 -179100645 + Charlie8 DNA MER1_type 10 540 -1877 1894 156 0 10 chr2 74155938 74156239 -179100344 + AluJo SINE Alu 1 298 -14 2082 263 102 118 chr2 74156239 74156558 -179100025 + Charlie8 DNA MER1_type 540 863 -1554 713 199 15 0 chr2 74156558 74156689 -179099894 + AluJb SINE Alu 1 133 -179 2082 263 102 118 chr2 74156689 74156989 -179099594 + Charlie8 DNA MER1_type 863 1166 -1251 2169 97 21 0 chr2 74156989 74157277 -179099306 - AluSx SINE Alu -18 294 1 2082 263 102 118 chr2 74157277 74158219 -179098364 + Charlie8 DNA MER1_type 1166 2121 -296 1887 161 3 3 chr2 74158219 74158517 -179098066 - AluJb SINE Alu -14 298 1 2082 263 102 118 chr2 74158517 74158546 -179098037 + Charlie8 DNA MER1_type 2121 2149 -268 744 187 0 8 chr2 74158546 74158680 -179097903 - FLAM_C SINE Alu 0 133 1 2082 263 102 118 chr2 74158680 74158879 -179097704 + Charlie8 DNA MER1_type 2149 2417 0 812 176 5 83 chr2 74159748 74159953 -179096630 + MER5A DNA MER1_type 1 189 0 6193 172 46 24 chr2 74160365 74161223 -179095360 - L1MB4 LINE L1 0 6180 5342 2461 67 3 0 chr2 74161223 74161521 -179095062 - AluSc SINE Alu -1 308 10 6193 172 46 24 chr2 74161521 74162079 -179094504 - L1MB4 LINE L1 -838 5342 4797 2602 43 0 0 chr2 74162079 74162384 -179094199 - AluY SINE Alu -6 305 1 6193 172 46 24 chr2 74162384 74162859 -179093724 - L1MB4 LINE L1 -1383 4797 4333 222 37 0 0 chr2 74162859 74162886 -179093697 + (TG)n Simple_repeat Simple_repeat 2 28 0 6193 172 46 24 chr2 74162886 74163047 -179093536 - L1MB4 LINE L1 -1847 4333 4177 2006 152 0 0 chr2 74163047 74163343 -179093240 + AluSx SINE Alu 1 296 -16 6193 172 46 24 chr2 74163343 74163566 -179093017 - L1MB4 LINE L1 -2003 4177 3876 374 174 73 28 chr2 74163560 74163594 -179092989 + L1 LINE L1 3620 3651 -2495 * 2315 109 0 7 chr2 74163594 74163897 -179092686 - AluSx SINE Alu -11 301 1 374 174 73 28 chr2 74163897 74163971 -179092612 + L1 LINE L1 3651 3733 -2413 943 249 49 31 chr2 74163989 74164378 -179092205 + L1MC4a LINE L1 4298 4693 -1453 425 167 0 0 chr2 74164420 74164486 -179092097 + AluJ/FLAM SINE Alu 1 66 -246 22 35 0 0 chr2 74164492 74164521 -179092062 + AT_rich Low_complexity Low_complexity 1 29 0 325 283 20 108 chr2 74164539 74164817 -179091766 + L1MC4a LINE L1 4751 4977 -1169 2238 101 3 7 chr2 74164817 74165124 -179091459 + AluSp SINE Alu 1 306 -7 325 283 20 108 chr2 74165124 74165291 -179091292 + L1MC4a LINE L1 4977 5157 -989 857 136 0 0 chr2 74165346 74165464 -179091119 + FLAM_C SINE Alu 1 118 -25 27 0 0 0 chr2 74165464 74165491 -179091092 + AT_rich Low_complexity Low_complexity 1 27 0 453 267 36 12 chr2 74165683 74165848 -179090735 + L1MC4a LINE L1 5737 5905 -1903 1853 137 46 3 chr2 74166767 74167051 -179089532 + AluJb SINE Alu 1 296 -16 916 283 30 4 chr2 74167781 74168018 -179088565 + MIR SINE MIR 2 244 -18 1969 128 10 13 chr2 74168316 74168621 -179087962 - AluSx SINE Alu -8 304 1 1835 157 10 0 chr2 74168793 74169086 -179087497 - AluJb SINE Alu -16 296 1 1968 135 0 14 chr2 74169334 74169631 -179086952 - AluJb SINE Alu -3 309 17 506 308 44 56 chr2 74169690 74170031 -179086552 - L1ME3A LINE L1 -209 5961 5625 328 294 37 20 chr2 74170032 74170170 -179086413 - L1ME3A LINE L1 -574 5590 5440 842 279 132 9 chr2 74170199 74170518 -179086065 + L2 LINE L2 2926 3283 -30 375 255 34 39 chr2 74170520 74170730 -179085853 - L1M2 LINE L1 -721 5443 5264 23 0 0 0 chr2 74170788 74170811 -179085772 + AT_rich Low_complexity Low_complexity 1 23 0 2568 68 0 0 chr2 74170814 74171122 -179085461 + AluY SINE Alu 1 308 -3 1950 138 3 20 chr2 74171180 74171484 -179085099 - AluJo SINE Alu -9 303 5 636 356 68 20 chr2 74171646 74172045 -179084538 + L2 LINE L2 2072 2489 -825 493 261 83 28 chr2 74172280 74172460 -179084123 - MLT1L LTR MaLR -6 609 420 5483 115 21 55 chr2 74172623 74172660 -179083923 - L1MA6 LINE L1 0 6300 6263 2107 123 0 7 chr2 74172660 74172952 -179083631 + AluSx SINE Alu 1 290 -22 5483 115 21 55 chr2 74172952 74173403 -179083180 - L1MA6 LINE L1 -37 6263 5798 2408 91 3 0 chr2 74173403 74173711 -179082872 + AluSx SINE Alu 1 309 -3 5483 115 21 55 chr2 74173711 74174366 -179082217 - L1MA6 LINE L1 -502 5798 5194 534 200 61 18 chr2 74174425 74174590 -179081993 - MLT1K LTR MaLR -4 584 413 775 268 130 21 chr2 74174621 74174905 -179081678 - MLT1K LTR MaLR -271 317 3 266 226 186 20 chr2 74174974 74175076 -179081507 - MER5A DNA MER1_type -70 119 1 2414 82 0 0 chr2 74175080 74175384 -179081199 + AluY SINE Alu 1 304 -7 182 364 7 50 chr2 74175593 74175733 -179080850 + L2 LINE L2 2920 3053 -219 220 271 85 0 chr2 74175790 74175849 -179080734 - L2 LINE L2 -1 3271 3208 318 255 122 56 chr2 74175878 74176182 -179080401 - L1MC/D LINE L1 -598 5564 5295 * 3177 212 55 37 chr2 74176178 74176769 -179079814 - L1ME1 LINE L1 -20 6957 6379 2024 120 28 3 chr2 74176769 74177052 -179079531 - AluSx SINE Alu -22 290 1 3177 212 55 37 chr2 74177052 74177594 -179078989 - L1ME1 LINE L1 -598 6379 5799 661 236 41 92 chr2 74177585 74178120 -179078463 - L1ME1 LINE L1 -2514 4443 3936 * 229 216 0 0 chr2 74178123 74178174 -179078409 + (TA)n Simple_repeat Simple_repeat 1 51 0 398 155 36 0 chr2 74178742 74178826 -179077757 - L1MB8 LINE L1 -5 6173 6087 1919 137 0 4 chr2 74178900 74179170 -179077413 + AluSx SINE Alu 35 303 -9 343 261 63 0 chr2 74179170 74179281 -179077302 + L1M4c LINE L1 1725 1842 -4542 410 213 115 17 chr2 74179292 74179466 -179077117 + L1M4c LINE L1 1951 2141 -4243 * 588 238 43 66 chr2 74179452 74179589 -179076994 - L1ME1 LINE L1 -3777 3213 3074 1816 158 35 3 chr2 74179589 74179873 -179076710 + AluJb SINE Alu 1 293 -19 588 238 43 66 chr2 74179873 74180169 -179076414 - L1ME1 LINE L1 -3916 3074 2794 5658 129 29 14 chr2 74180182 74181111 -179075472 - Tigger2 DNA MER2_type 0 2718 1776 217 85 0 64 chr2 74181111 74181158 -179075425 + (TTCCC)n Simple_repeat Simple_repeat 4 47 0 759 69 0 10 chr2 74181191 74181293 -179075290 - AluSg/x SINE Alu -48 264 164 447 207 41 12 chr2 74181295 74181464 -179075119 + T-rich Low_complexity Low_complexity 3 176 0 225 237 0 0 chr2 74181483 74181542 -179075041 + CT-rich Low_complexity Low_complexity 5 63 0 465 171 229 9 chr2 74181589 74181694 -179074889 + FLAM_C SINE Alu 1 128 -15 9004 149 76 4 chr2 74181699 74183351 -179073232 - Tigger2 DNA MER2_type -947 1771 1 2512 47 0 3 chr2 74183404 74183703 -179072880 + AluY SINE Alu 1 298 -13 297 0 0 0 chr2 74183713 74183752 -179072831 + (TG)n Simple_repeat Simple_repeat 1 72 0 297 0 0 0 chr2 74183752 74183785 -179072798 + (TG)n Simple_repeat Simple_repeat 2 34 0 1114 144 16 31 chr2 74183811 74184005 -179072578 - AluJb SINE Alu -31 281 91 387 232 10 0 chr2 74184083 74184182 -179072401 + L1M4c LINE L1 1049 1148 -5236 * 1802 284 49 4 chr2 74184175 74184707 -179071876 - L1ME1 LINE L1 -6303 556 1 13348 185 39 16 chr2 74184720 74185637 -179070946 - L1PB1 LINE L1 0 6867 5973 3333 111 45 10 chr2 74185637 74186131 -179070452 - MER9 LTR ERVK 0 511 1 13348 185 39 16 chr2 74186131 74189465 -179067118 - L1PB1 LINE L1 -894 5973 2217 2296 117 0 0 chr2 74189465 74189764 -179066819 - AluSg SINE Alu -11 299 1 13348 185 39 16 chr2 74189764 74192035 -179064548 - L1PB1 LINE L1 -4650 2217 1 1220 235 93 37 chr2 74192293 74192532 -179064051 - MLT1F LTR MaLR 0 542 318 1865 160 6 22 chr2 74192532 74192844 -179063739 - AluJo SINE Alu -4 308 2 1220 235 93 37 chr2 74192844 74193122 -179063461 - MLT1F LTR MaLR -224 318 4 2175 123 0 3 chr2 74193808 74194108 -179062475 + AluSx SINE Alu 1 299 -13 1163 285 125 17 chr2 74194317 74194848 -179061735 + L2 LINE L2 2667 2883 -430 1989 172 26 10 chr2 74194848 74195232 -179061351 + MLT1B LTR MaLR 1 390 0 1163 285 125 17 chr2 74195232 74195699 -179060884 + L2 LINE L2 2883 3298 -15 1634 228 41 47 chr2 74195767 74196280 -179060303 - MER74B LTR ERVL -74 548 39 251 220 77 0 chr2 74196458 74196549 -179060034 + L1M4 LINE L1 4931 5028 -1118 282 56 0 0 chr2 74197043 74197079 -179059504 + (CA)n Simple_repeat Simple_repeat 2 37 0 935 225 5 14 chr2 74197089 74197302 -179059281 - L2 LINE L2 0 3313 3103 322 323 45 27 chr2 74197364 74197584 -179058999 + L1MC/D LINE L1 3376 3599 -2547 361 314 77 42 chr2 74197598 74197621 -179058962 + L1MC/D LINE L1 5499 5520 -2288 2438 95 0 0 chr2 74197621 74197927 -179058656 - AluSg SINE Alu -4 306 1 361 314 77 42 chr2 74197927 74198215 -179058368 + L1MC/D LINE L1 5520 5821 -1987 303 250 86 26 chr2 74198304 74198420 -179058163 + HAL1b LINE L1 1188 1310 -38 201 247 22 90 chr2 74198700 74198789 -179057794 + MIR SINE MIR 98 180 -82 2014 83 32 4 chr2 74199008 74199285 -179057298 - AluSx SINE Alu -27 285 1 541 290 69 25 chr2 74201462 74201707 -179054876 + MIR SINE MIR 7 262 0 193 227 68 0 chr2 74201957 74202001 -179054582 + L2 LINE L2 3221 3267 -5 2383 47 13 7 chr2 74202459 74202759 -179053824 + AluY SINE Alu 1 302 -9 1368 194 66 28 chr2 74202870 74203159 -179053424 - AluJo SINE Alu -12 300 1 266 217 173 81 chr2 74203379 74203813 -179052770 - L1MC5 LINE L1 -37 7924 7451 2445 67 6 6 chr2 74203906 74204218 -179052365 + AluSp SINE Alu 1 312 -1 325 304 72 62 chr2 74204354 74204548 -179052035 - MIR SINE MIR -10 252 57 297 325 130 0 chr2 74204548 74204671 -179051912 - MIR SINE MIR -121 141 3 1647 246 98 53 chr2 74205073 74205235 -179051348 - L1MC4 LINE L1 -119 7923 7770 1568 160 50 21 chr2 74205235 74205517 -179051066 - AluJb SINE Alu -16 296 7 1647 246 98 53 chr2 74205517 74206225 -179050358 - L1MC4 LINE L1 -272 7770 7014 540 288 0 11 chr2 74206230 74206407 -179050176 - L1MC4a LINE L1 -1264 6544 6370 604 264 140 19 chr2 74206549 74206920 -179049663 - L1MC4a LINE L1 -1507 6301 5886 2225 93 7 3 chr2 74206968 74207268 -179049315 - AluSg SINE Alu -9 301 1 221 255 217 0 chr2 74208616 74208722 -179047861 + MIR SINE MIR 84 212 -50 23 54 0 0 chr2 74209812 74209849 -179046734 + AT_rich Low_complexity Low_complexity 1 37 0 932 90 16 0 chr2 74209933 74210055 -179046528 + AluSg/x SINE Alu 176 299 -11 2280 90 0 7 chr2 74211667 74211966 -179044617 + AluSc SINE Alu 2 298 -11 287 183 28 28 chr2 74212080 74212151 -179044432 - MER44D DNA MER2_type -1 604 534 1501 191 80 3 chr2 74212796 74213110 -179043473 + MER44D DNA MER2_type 1 608 -1 1423 184 49 4 chr2 74213224 74213490 -179043093 - AluJb SINE Alu -24 288 11 710 165 0 38 chr2 74213494 74213627 -179042956 - FLAM_C SINE Alu -5 128 1 1975 136 23 13 chr2 74214563 74214864 -179041719 + AluSx SINE Alu 2 305 -7 683 246 129 9 chr2 74215639 74215863 -179040720 + MIR SINE MIR 12 262 0 2382 89 3 6 chr2 74220012 74220325 -179036258 + AluSx SINE Alu 1 312 0 499 277 79 43 chr2 74221390 74221668 -179034915 - MER102a DNA MER1_type -33 297 10 2214 116 6 6 chr2 74222270 74222581 -179034002 + AluSq SINE Alu 1 311 -2 2255 74 40 0 chr2 74222774 74223072 -179033511 - AluY SINE Alu 0 311 2 1434 182 55 22 chr2 74224337 74224612 -179031971 + AluJo SINE Alu 13 296 -16 269 132 0 0 chr2 74224907 74224945 -179031638 - MER4D LTR ERV1 -74 798 761 379 388 25 0 chr2 74224969 74225165 -179031418 - MLT1K LTR MaLR -296 292 92 548 186 35 0 chr2 74225630 74225743 -179030840 + Tigger1 DNA MER2_type 1 117 -2301 920 250 47 62 chr2 74225791 74226175 -179030408 - MLT1C LTR MaLR -80 387 10 706 125 86 8 chr2 74226605 74226733 -179029850 + Tigger1 DNA MER2_type 100 237 -2181 * 962 162 139 0 chr2 74226727 74226943 -179029640 + Tigger1 DNA MER2_type 2172 2417 -1 2223 208 35 28 chr2 74226951 74227462 -179029121 - MLT2B3 LTR ERVL -48 506 1 445 245 98 49 chr2 74227755 74227918 -179028665 - MIR SINE MIR -22 240 70 506 265 123 4 chr2 74228026 74228279 -179028304 - L1MC4 LINE L1 -69 7973 7691 201 109 0 43 chr2 74228370 74228416 -179028167 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 1385 155 49 9 chr2 74228840 74229066 -179027517 - AluSx SINE Alu -73 239 5 244 367 0 0 chr2 74229183 74229273 -179027310 - MIR SINE MIR -125 137 48 312 169 31 0 chr2 74229366 74229431 -179027152 + L1MC5 LINE L1 7798 7864 -97 242 336 113 19 chr2 74229934 74230190 -179026393 + L2 LINE L2 1998 2277 -1037 23 33 0 0 chr2 74231010 74231040 -179025543 + AT_rich Low_complexity Low_complexity 1 30 0 245 313 16 0 chr2 74232627 74232691 -179023892 + Charlie1 DNA MER1_type 7 71 -2690 * 613 165 207 116 chr2 74232689 74233070 -179023513 + Charlie1 DNA MER1_type 2346 2761 0 1565 170 50 11 chr2 74233546 74233823 -179022760 - AluJo SINE Alu -24 288 1 1608 163 3 36 chr2 74233887 74234194 -179022389 + AluJb SINE Alu 2 298 -14 22 35 0 0 chr2 74234759 74234788 -179021795 + AT_rich Low_complexity Low_complexity 1 29 0 1467 185 14 32 chr2 74235100 74235249 -179021334 - AluJo SINE Alu -36 276 133 2199 98 3 26 chr2 74235249 74235556 -179021027 - AluSg SINE Alu -10 300 1 1467 185 14 32 chr2 74235556 74235687 -179020896 - AluJo SINE Alu -179 133 1 22 35 0 0 chr2 74235742 74235771 -179020812 + AT_rich Low_complexity Low_complexity 1 29 0 599 233 74 23 chr2 74236536 74236712 -179019871 - MER58A DNA MER1_type -13 211 27 2017 124 41 0 chr2 74236870 74237160 -179019423 + AluSx SINE Alu 1 302 -10 801 112 0 9 chr2 74237174 74237290 -179019293 + FLAM_C SINE Alu 1 115 -18 512 289 16 46 chr2 74238064 74238258 -179018325 - L1ME3A LINE L1 -88 6082 5895 24 32 0 0 chr2 74238472 74238503 -179018080 + AT_rich Low_complexity Low_complexity 1 31 0 6253 118 20 59 chr2 74238507 74239962 -179016621 - L1MA2 LINE L1 0 6304 4916 2647 206 24 19 chr2 74239956 74240548 -179016035 - L1M1 LINE L1 -6952 613 19 * 318 284 171 28 chr2 74240652 74241121 -179015462 - L1MC4a LINE L1 -1960 5848 5313 2021 75 100 0 chr2 74241255 74241535 -179015048 - AluY SINE Alu -3 308 1 317 73 0 0 chr2 74241609 74241650 -179014933 - MER4D LTR ERV1 -72 800 760 1752 179 0 10 chr2 74241653 74241943 -179014640 - AluJb SINE Alu -25 287 1 564 260 87 68 chr2 74242276 74242463 -179014120 - L1MC4a LINE L1 -1436 4710 4528 1574 178 0 20 chr2 74242463 74242755 -179013828 + AluJb SINE Alu 11 296 -16 564 260 87 68 chr2 74242755 74242933 -179013650 - L1MC4a LINE L1 -1618 4528 4338 550 311 77 32 chr2 74243040 74243416 -179013167 - MLT1J LTR MaLR -2 509 117 25 0 0 0 chr2 74244631 74244656 -179011927 + AT_rich Low_complexity Low_complexity 1 25 0 227 190 32 1 chr2 74244808 74245057 -179011526 + AluJb SINE Alu 1 289 -13 255 364 34 0 chr2 74245408 74245496 -179011087 - L2 LINE L2 -15 3257 3167 284 221 11 32 chr2 74245869 74245964 -179010619 + HAL1b LINE L1 646 738 -610 22 35 0 0 chr2 74245968 74245997 -179010586 + AT_rich Low_complexity Low_complexity 1 29 0 857 291 115 36 chr2 74246288 74246990 -179009593 - L2 LINE L2 0 3313 2565 2716 178 54 28 chr2 74247045 74247573 -179009010 + Tigger7 DNA MER2_type 1 514 -2073 702 99 30 0 chr2 74247573 74247674 -179008909 - U6 snRNA snRNA -1 106 3 2716 178 54 28 chr2 74247674 74247814 -179008769 + Tigger7 DNA MER2_type 514 2555 -32 313 262 97 0 chr2 74249519 74249622 -179006961 - MER103 DNA DNA -37 129 17 32 0 0 0 chr2 74249892 74249924 -179006659 + AT_rich Low_complexity Low_complexity 1 32 0 399 260 26 101 chr2 74250411 74250638 -179005945 - L2 LINE L2 -16 3297 3088 238 323 127 51 chr2 74250805 74250858 -179005725 - MIR SINE MIR -62 200 152 1989 121 28 0 chr2 74250858 74251140 -179005443 + AluSq SINE Alu 1 290 -23 238 323 127 51 chr2 74251140 74251244 -179005339 - MIR SINE MIR -110 152 31 1891 127 9 88 chr2 74251380 74251719 -179004864 - AluSx SINE Alu 0 312 1 184 318 111 24 chr2 74252032 74252158 -179004425 + L2 LINE L2 2593 2729 -585 1657 185 86 16 chr2 74252908 74253642 -179002941 + L1MD2 LINE L1 5446 6350 -9 325 330 103 12 chr2 74253668 74253900 -179002683 + L1ME LINE L1 3692 3944 -2202 1103 199 43 0 chr2 74253924 74254135 -179002448 + AluJb SINE Alu 87 306 -6 220 313 0 0 chr2 74254151 74254215 -179002368 + (TA)n Simple_repeat Simple_repeat 2 65 0 22 0 0 0 chr2 74254305 74254327 -179002256 + AT_rich Low_complexity Low_complexity 1 22 0 756 189 92 6 chr2 74254668 74254832 -179001751 - AluSg/x SINE Alu 0 309 132 320 289 96 51 chr2 74254886 74255083 -179001500 + L1ME LINE L1 4625 4830 -1316 2025 118 28 0 chr2 74255211 74255498 -179001085 + AluSx SINE Alu 6 300 -12 258 261 49 28 chr2 74255706 74255848 -179000735 + L1ME LINE L1 5272 5416 -2392 1587 161 16 178 chr2 74255916 74256462 -179000121 + LTR22A LTR ERVK 1 458 0 28655 101 20 4 chr2 74256464 74260519 -178996064 + HERVK22 LTR ERVK 3 4123 -2714 29512 25 1 0 chr2 74263160 74266773 -178989810 - L1P1 LINE L1 -681 5474 1860 22 0 0 0 chr2 74266892 74266914 -178989669 + AT_rich Low_complexity Low_complexity 1 22 0 28 29 0 0 chr2 74266929 74266964 -178989619 + AT_rich Low_complexity Low_complexity 1 35 0 281 244 13 0 chr2 74268589 74268667 -178987916 + L1MEd LINE L1 27 105 -6014 21 0 0 0 chr2 74268683 74268704 -178987879 + AT_rich Low_complexity Low_complexity 1 21 0 340 204 51 51 chr2 74268773 74268871 -178987712 - L2 LINE L2 -35 3278 3181 14047 49 71 4 chr2 74269329 74271168 -178985415 + L1P LINE L1 3 1965 -4181 12216 83 23 1 chr2 74271271 74272901 -178983682 + HERVK22 LTR ERVK 5171 6837 0 1852 187 43 50 chr2 74272901 74273362 -178983221 + LTR22A LTR ERVK 1 458 0 381 306 32 0 chr2 74273415 74273539 -178983044 + L1ME LINE L1 5524 5651 -470 1936 145 3 10 chr2 74274207 74274510 -178982073 + AluSx SINE Alu 1 301 -11 1958 116 77 9 chr2 74275680 74276017 -178980566 - MER46B DNA MER2_type 0 236 2 1521 68 54 0 chr2 74277229 74277450 -178979133 - L1PA13 LINE L1 0 6163 5931 753 141 58 0 chr2 74279115 74279236 -178977347 + AluSg/x SINE Alu 165 292 -18 301 270 52 95 chr2 74280662 74280873 -178975710 + L1ME LINE L1 5282 5483 -687 279 255 11 106 chr2 74280933 74281027 -178975556 - L2 LINE L2 0 3272 3188 1591 182 0 24 chr2 74281866 74282162 -178974421 + AluJo SINE Alu 3 291 -21 279 319 170 15 chr2 74283963 74284098 -178972485 + MIR3 SINE MIR 32 187 -21 2002 141 0 0 chr2 74284155 74284445 -178972138 + AluJo SINE Alu 2 291 -21 2434 183 64 30 chr2 74284954 74285529 -178971054 - L1MB3 LINE L1 -3 6180 5586 460 285 144 31 chr2 74287331 74287587 -178968996 - HAL1 LINE L1 -789 1718 1434 1186 184 21 111 chr2 74287615 74287947 -178968636 - AluJo SINE Alu 0 302 1 590 313 144 23 chr2 74287950 74288346 -178968237 - L2 LINE L2 -12 3301 2858 2137 118 3 10 chr2 74288429 74288734 -178967849 - AluSg SINE Alu -7 303 1 186 128 0 0 chr2 74288870 74288909 -178967674 + (T)n Simple_repeat Simple_repeat 1 39 0 5452 11 0 0 chr2 74288911 74289526 -178967057 - L1HS LINE L1 0 6155 5541 727 233 55 0 chr2 74389698 74389861 -178866722 + AluJb SINE Alu 120 291 -21 243 297 45 27 chr2 74390230 74390341 -178866242 + L2 LINE L2 3156 3268 -4 1169 223 76 29 chr2 74390558 74390899 -178865684 - L1MB4 LINE L1 -19 6161 5805 302 286 0 0 chr2 74391058 74391135 -178865448 - L2 LINE L2 0 3272 3196 211 261 49 70 chr2 74392737 74392879 -178863704 + L2 LINE L2 2124 2262 -1052 217 320 13 13 chr2 74393124 74393199 -178863384 + L2 LINE L2 2567 2641 -673 2195 84 0 4 chr2 74393550 74393825 -178862758 + AluSx SINE Alu 1 274 -38 642 165 91 0 chr2 74393926 74394047 -178862536 + MER20 DNA MER1_type 88 219 0 239 235 0 0 chr2 74394099 74394150 -178862433 - L2 LINE L2 -239 3074 3024 193 206 0 0 chr2 74394189 74394223 -178862360 + L2 LINE L2 3221 3254 -18 224 355 0 0 chr2 74394492 74394568 -178862015 - L2 LINE L2 0 3272 3197 796 283 25 21 chr2 74396323 74396560 -178860023 - MIR SINE MIR -2 260 23 250 224 7 7 chr2 74397503 74397646 -178858937 + (CA)n Simple_repeat Simple_repeat 2 144 0 309 239 0 0 chr2 74397682 74397820 -178858763 + (CA)n Simple_repeat Simple_repeat 2 139 0 220 343 179 21 chr2 74398091 74398231 -178858352 + MIR SINE MIR 51 212 -50 * 500 217 197 7 chr2 74398229 74398381 -178858202 - MER5A DNA MER1_type -6 183 3 404 256 169 36 chr2 74399693 74399823 -178856760 - MIR SINE MIR 0 262 151 875 244 24 24 chr2 74399823 74400032 -178856551 - MER3 DNA MER1_type 0 209 1 404 256 169 36 chr2 74400032 74400120 -178856463 - MIR SINE MIR -111 151 15 180 0 0 0 chr2 74400742 74400762 -178855821 + (CTGGGG)n Simple_repeat Simple_repeat 1 20 0 201 204 0 45 chr2 74400804 74400848 -178855735 - L2 LINE L2 -16 3256 3215 377 243 207 0 chr2 74401140 74401251 -178855332 + MER94 DNA DNA 1 134 0 361 311 10 10 chr2 74401801 74401904 -178854679 + MIR SINE MIR 56 158 -104 443 283 0 85 chr2 74401910 74401933 -178854650 - MIR SINE MIR 0 262 239 1066 229 8 59 chr2 74401933 74402007 -178854576 + MER58A DNA MER1_type 1 77 -2343 1700 95 136 11 chr2 74402007 74402271 -178854312 + AluSg1 SINE Alu 10 306 -3 1066 229 8 59 chr2 74402271 74402432 -178854151 + MER58A DNA MER1_type 77 224 0 443 283 0 85 chr2 74402432 74402585 -178853998 - MIR SINE MIR -23 239 101 1712 193 38 45 chr2 74402764 74402795 -178853788 + MER63B DNA MER1_type 7 37 -1025 186 43 0 0 chr2 74402795 74402818 -178853765 + (CAAAA)n Simple_repeat Simple_repeat 1 23 0 1712 193 38 45 chr2 74402818 74403034 -178853549 + MER63B DNA MER1_type 37 252 -810 1148 144 0 6 chr2 74403034 74403201 -178853382 + FRAM SINE Alu 1 166 0 1712 193 38 45 chr2 74403201 74403378 -178853205 + MER63B DNA MER1_type 252 429 -7 249 347 65 8 chr2 74404760 74404884 -178851699 - L2 LINE L2 0 3313 3183 5645 71 32 7 chr2 74405213 74406185 -178850398 - SVA Other Other -521 881 53 793 76 15 0 chr2 74406185 74406316 -178850267 + (GGGAGA)n Simple_repeat Simple_repeat 3 135 0 1855 116 0 4 chr2 74406786 74407053 -178849530 - AluSq SINE Alu -10 303 38 649 316 113 8 chr2 74407176 74407531 -178849052 - L2 LINE L2 -1 3312 2921 255 200 47 24 chr2 74407582 74407667 -178848916 - L1MC5 LINE L1 -35 7926 7840 197 0 0 67 chr2 74408736 74408766 -178847817 + (TTTTTG)n Simple_repeat Simple_repeat 4 31 0 203 170 0 19 chr2 74409660 74409695 -178846888 + (TGAA)n Simple_repeat Simple_repeat 1 36 -16 1966 132 30 0 chr2 74409695 74409999 -178846584 + AluSq SINE Alu 1 313 0 203 170 0 19 chr2 74409999 74410016 -178846567 + (TGAA)n Simple_repeat Simple_repeat 36 52 0 366 307 150 13 chr2 74413030 74413183 -178843400 + MIR SINE MIR 15 188 -74 203 352 28 9 chr2 74413734 74413842 -178842741 + MIR3 SINE MIR 67 176 -32 223 300 43 79 chr2 74414171 74414311 -178842272 + MIR SINE MIR 103 237 -25 418 259 176 42 chr2 74414359 74414552 -178842031 - MIR SINE MIR -19 243 25 481 267 199 34 chr2 74414559 74414735 -178841848 + MIR SINE MIR 18 222 -40 308 250 105 16 chr2 74419036 74419194 -178837389 + MIR SINE MIR 39 206 -56 298 366 108 21 chr2 74419397 74419676 -178836907 - L2 LINE L2 0 3272 2970 663 184 105 0 chr2 74420019 74420088 -178836495 - MIR SINE MIR -32 230 170 1929 129 49 0 chr2 74420088 74420374 -178836209 + AluSx SINE Alu 1 300 -12 663 184 105 0 chr2 74420374 74420456 -178836127 - MIR SINE MIR -92 170 63 203 339 196 7 chr2 74420481 74420767 -178835816 - L2 LINE L2 -798 2516 2177 314 287 43 0 chr2 74421438 74421532 -178835051 + L2 LINE L2 2223 2320 -994 379 278 39 67 chr2 74421846 74422101 -178834482 + L2 LINE L2 2827 3074 -198 343 296 216 28 chr2 74424342 74424518 -178832065 + MIR SINE MIR 42 250 -12 213 306 0 16 chr2 74424530 74424592 -178831991 - MIR SINE MIR -122 86 26 766 215 64 0 chr2 74425519 74425691 -178830892 - MER5A DNA MER1_type -6 183 1 295 323 42 0 chr2 74425741 74425837 -178830746 + MIR SINE MIR 103 202 -60 1782 125 10 34 chr2 74427606 74427902 -178828681 - AluSx SINE Alu -18 294 6 435 267 97 30 chr2 74428226 74428391 -178828192 + MIR SINE MIR 81 256 -6 198 91 0 0 chr2 74428497 74428530 -178828053 + (TG)n Simple_repeat Simple_repeat 2 34 0 216 0 0 0 chr2 74428871 74428895 -178827688 + (A)n Simple_repeat Simple_repeat 1 24 0 1097 192 35 5 chr2 74429923 74430126 -178826457 - MER3 DNA MER1_type 0 209 1 1739 153 14 0 chr2 74431081 74431363 -178825220 - AluJb SINE Alu -15 297 12 303 327 0 9 chr2 74431510 74431617 -178824966 - MIR SINE MIR -155 107 2 1791 145 38 7 chr2 74431779 74432069 -178824514 - AluJo SINE Alu -13 299 1 2275 71 10 10 chr2 74432078 74432388 -178824195 - AluY SINE Alu -1 310 1 192 391 43 0 chr2 74432424 74432539 -178824044 - L3 LINE CR1 -243 1334 1215 317 291 0 58 chr2 74432666 74432769 -178823814 - L1ME3 LINE L1 -6 6156 6060 399 136 5 95 chr2 74434238 74434630 -178821953 + (CA)n Simple_repeat Simple_repeat 1 356 0 312 93 10 82 chr2 74434642 74434836 -178821747 + (CA)n Simple_repeat Simple_repeat 1 180 0 278 126 3 96 chr2 74434925 74435325 -178821258 + (CA)n Simple_repeat Simple_repeat 1 362 0 225 179 0 87 chr2 74435416 74435612 -178820971 + (CA)n Simple_repeat Simple_repeat 1 179 0 378 280 172 33 chr2 74435690 74436051 -178820532 - LTR16A1 LTR ERVL 0 457 47 1236 125 0 0 chr2 74437024 74437200 -178819383 - AluSg/x SINE Alu 0 312 137 278 295 152 29 chr2 74438963 74439173 -178817410 - MLT1K LTR MaLR -37 551 316 185 62 0 31 chr2 74439430 74439462 -178817121 + (CAAAAA)n Simple_repeat Simple_repeat 3 33 0 239 356 77 5 chr2 74439507 74439701 -178816882 - L2 LINE L2 -557 2757 2550 206 219 16 0 chr2 74442079 74442143 -178814440 + (TG)n Simple_repeat Simple_repeat 2 66 0 278 318 65 73 chr2 74443330 74443698 -178812885 + L2 LINE L2 2852 3216 -56 651 292 75 13 chr2 74443706 74443932 -178812651 - MIR SINE MIR -3 259 20 2388 94 10 3 chr2 74445370 74445678 -178810905 - AluSq SINE Alu -3 310 1 361 189 158 0 chr2 74446634 74446729 -178809854 - MER103 DNA DNA -21 145 36 300 307 63 17 chr2 74447315 74447511 -178809072 - L1ME LINE L1 -517 5604 5401 818 202 49 16 chr2 74449638 74449821 -178806762 + MER5A DNA MER1_type 1 189 0 509 287 72 5 chr2 74449978 74450173 -178806410 + L2 LINE L2 2520 2727 -587 378 194 11 75 chr2 74450333 74450426 -178806157 + L2 LINE L2 3186 3272 0 757 254 5 29 chr2 74451438 74451647 -178804936 + MER3 DNA MER1_type 6 209 0 194 318 148 0 chr2 74453938 74453984 -178802599 - L3b LINE CR1 -3 1580 1522 400 298 43 39 chr2 74453984 74454217 -178802366 + MER5A DNA MER1_type 1 189 0 325 265 186 0 chr2 74454407 74454509 -178802074 - L3 LINE CR1 -87 1490 1370 214 191 0 0 chr2 74455324 74455366 -178801217 - L2 LINE L2 -208 3064 3023 180 275 165 0 chr2 74457007 74457098 -178799485 - L2 LINE L2 -213 3059 2954 735 288 131 67 chr2 74459336 74460126 -178796457 - L2 LINE L2 -193 3079 2231 218 257 147 9 chr2 74461353 74461462 -178795121 - MER91C DNA MER1_type -16 124 1 232 158 0 0 chr2 74461705 74461743 -178794840 - L2 LINE L2 -13 3259 3222 * 529 307 181 0 chr2 74461710 74461915 -178794668 - MIR SINE MIR -12 250 9 612 190 15 66 chr2 74462213 74462350 -178794233 + MER91B DNA MER1_type 1 130 -60 355 250 83 0 chr2 74462369 74462453 -178794130 + MER91B DNA MER1_type 93 183 -7 429 309 99 3 chr2 74462474 74462643 -178793940 - MIR SINE MIR -45 217 38 207 223 0 75 chr2 74463317 74463411 -178793172 + CT-rich Low_complexity Low_complexity 1 87 0 317 305 7 32 chr2 74465252 74465406 -178791177 + GA-rich Low_complexity Low_complexity 3 152 0 355 358 99 20 chr2 74466601 74466945 -178789638 + L2 LINE L2 2889 3259 -13 227 195 0 0 chr2 74466958 74466999 -178789584 + (TGGA)n Simple_repeat Simple_repeat 1 41 0 217 225 0 0 chr2 74467617 74467657 -178788926 - L2 LINE L2 -95 3218 3179 269 127 28 0 chr2 74468881 74468952 -178787631 - L1ME4a LINE L1 -2 6119 6047 213 271 0 0 chr2 74469033 74469081 -178787502 + (TCTCTG)n Simple_repeat Simple_repeat 2 49 0 287 231 58 0 chr2 74469710 74469814 -178786769 + (TG)n Simple_repeat Simple_repeat 1 110 0 379 134 34 60 chr2 74469840 74470196 -178786387 + (GTGTG)n Simple_repeat Simple_repeat 1 346 0 285 241 58 0 chr2 74470226 74470363 -178786220 + (TG)n Simple_repeat Simple_repeat 1 145 0 209 312 0 11 chr2 74471219 74471312 -178785271 + L2 LINE L2 2883 2974 -339 182 327 67 10 chr2 74471350 74471454 -178785129 + L2 LINE L2 2588 2697 -617 180 267 104 30 chr2 74471462 74471597 -178784986 + L3 LINE CR1 1423 1567 -10 454 303 111 5 chr2 74471787 74471995 -178784588 - MIR SINE MIR -12 250 21 212 298 0 0 chr2 74472224 74472281 -178784302 + GA-rich Low_complexity Low_complexity 2 58 0 588 309 125 19 chr2 74472935 74473236 -178783347 - L1ME4a LINE L1 -1 6189 5851 2256 101 0 3 chr2 74473236 74473523 -178783060 - AluSg SINE Alu -24 286 1 588 309 125 19 chr2 74473523 74473541 -178783042 - L1ME4a LINE L1 -339 5851 5836 317 264 121 59 chr2 74473741 74474169 -178782414 - L1ME4a LINE L1 -1710 4505 4033 2171 136 3 0 chr2 74474169 74474478 -178782105 - AluSx SINE Alu -2 310 1 317 264 121 59 chr2 74474478 74474595 -178781988 - L1ME4a LINE L1 -2182 4033 3925 2455 25 0 0 chr2 74474739 74475021 -178781562 - L1PA2 LINE L1 -1 6154 5873 1874 166 7 0 chr2 74475352 74475641 -178780942 + AluJb SINE Alu 1 291 -21 356 299 159 20 chr2 74475896 74476173 -178780410 - L1ME4a LINE L1 -2363 3852 3547 372 266 69 102 chr2 74476508 74476812 -178779771 - L1ME4a LINE L1 -2776 3439 3146 2301 263 107 70 chr2 74476842 74479611 -178776972 - L1M4 LINE L1 -1093 5053 2182 417 299 103 55 chr2 74479617 74479965 -178776618 - L1ME4a LINE L1 -4183 2213 1849 21 0 0 0 chr2 74480196 74480217 -178776366 + AT_rich Low_complexity Low_complexity 1 21 0 2061 142 3 16 chr2 74480232 74480542 -178776041 + AluJb SINE Alu 1 306 -6 1315 263 105 35 chr2 74480570 74481228 -178775355 - L1ME4a LINE L1 -4906 1299 596 412 260 47 12 chr2 74481234 74481403 -178775180 - L1ME4a LINE L1 -5934 271 97 181 301 108 0 chr2 74484216 74484299 -178772284 - L3b LINE CR1 -317 1266 1175 4201 275 121 23 chr2 74486934 74487029 -178769554 - L2 LINE L2 0 3313 3229 2529 83 0 3 chr2 74487029 74487342 -178769241 + AluSx SINE Alu 1 312 0 4201 275 121 23 chr2 74487342 74489328 -178767255 - L2 LINE L2 -84 3229 1046 629 189 28 7 chr2 74489783 74489926 -178766657 - L1MB8 LINE L1 -2 6176 6031 264 244 58 12 chr2 74489946 74490032 -178766551 - MIR SINE MIR -72 190 101 4139 138 22 2 chr2 74490035 74490866 -178765717 - L1MB7 LINE L1 -167 6017 5171 27 0 0 0 chr2 74490882 74490909 -178765674 + AT_rich Low_complexity Low_complexity 1 27 0 697 264 89 49 chr2 74491087 74491413 -178765170 - L1ME4a LINE L1 -260 5861 5523 799 247 96 4 chr2 74491475 74491714 -178764869 - MIR SINE MIR 0 262 2 189 217 43 0 chr2 74491746 74491792 -178764791 - L2 LINE L2 -314 2958 2911 550 183 35 0 chr2 74491955 74492070 -178764513 - MER58B DNA MER1_type -1 340 222 232 271 126 15 chr2 74492150 74492296 -178764287 - L1M4 LINE L1 -2286 3860 3701 288 0 0 0 chr2 74492297 74492329 -178764254 + (TG)n Simple_repeat Simple_repeat 2 33 0 235 276 9 0 chr2 74492498 74492603 -178763980 - L1M4 LINE L1 -2665 3481 3376 336 322 96 57 chr2 74492642 74492729 -178763854 - L1M4 LINE L1 -2847 3299 3217 2474 35 0 3 chr2 74492729 74493011 -178763572 - AluY SINE Alu -3 308 28 336 322 96 57 chr2 74493011 74493277 -178763306 - L1M4 LINE L1 -2929 3217 2932 258 284 84 25 chr2 74493297 74493536 -178763047 - L1M4 LINE L1 -3235 2911 2659 246 225 56 28 chr2 74494459 74494530 -178762053 - MIR3 SINE MIR -23 185 113 841 158 26 42 chr2 74496344 74496469 -178760114 - MER53 DNA DNA 0 189 66 4619 129 26 68 chr2 74496469 74497289 -178759294 - LTR1 LTR ERV1 0 785 1 841 158 26 42 chr2 74497289 74497353 -178759230 - MER53 DNA DNA -123 66 3 722 295 109 89 chr2 74498148 74499018 -178757565 + L1ME4a LINE L1 2081 2942 -3273 295 204 10 48 chr2 74499299 74499402 -178757181 + L1MC5 LINE L1 7832 7930 -31 836 319 15 63 chr2 74499977 74500581 -178756002 + HAL1b LINE L1 61 635 -713 653 137 0 0 chr2 74500624 74500719 -178755864 + FRAM SINE Alu 75 169 -7 424 289 44 25 chr2 74500719 74500878 -178755705 + HAL1b LINE L1 696 857 -491 393 332 77 33 chr2 74501411 74501759 -178754824 + L1M4 LINE L1 2245 2576 -3570 2100 141 0 0 chr2 74501759 74502074 -178754509 + AluSx SINE Alu 1 315 0 393 332 77 33 chr2 74502074 74502507 -178754076 + L1M4 LINE L1 2576 3061 -3085 1768 305 117 79 chr2 74502512 74504645 -178751938 + L1ME4a LINE L1 2960 5177 -1038 6453 23 0 0 chr2 74504645 74505383 -178751200 + L1PA4 LINE L1 5417 6154 -1 1768 305 117 79 chr2 74505383 74505411 -178751172 + L1ME4a LINE L1 5177 5202 -1013 234 158 0 74 chr2 74505433 74505528 -178751055 + (CATAA)n Simple_repeat Simple_repeat 4 91 0 485 296 77 54 chr2 74505586 74505991 -178750592 + L1ME4a LINE L1 5335 5748 -442 934 122 0 0 chr2 74506055 74506186 -178750397 + FLAM_C SINE Alu 1 131 -12 458 291 74 91 chr2 74506188 74506351 -178750232 + L1ME4a LINE L1 5785 5949 -241 1765 133 14 56 chr2 74506351 74506637 -178749946 + AluJo SINE Alu 1 274 -38 458 291 74 91 chr2 74506637 74506879 -178749704 + L1ME4a LINE L1 5949 6183 -7 280 329 20 31 chr2 74507473 74507698 -178748885 + CT-rich Low_complexity Low_complexity 1 222 0 346 272 6 43 chr2 74507941 74508103 -178748480 + (ATGGTG)n Simple_repeat Simple_repeat 6 161 0 2729 89 3 0 chr2 74508118 74508468 -178748115 - THE1A LTR MaLR -4 351 1 12123 87 10 2 chr2 74508468 74510035 -178746548 - THE1A-int LTR MaLR 0 1580 1 2804 79 3 0 chr2 74510035 74510389 -178746194 - THE1A LTR MaLR 0 355 1 269 356 58 71 chr2 74510632 74510958 -178745625 - L2 LINE L2 -66 3206 2885 942 237 30 4 chr2 74511033 74511265 -178745318 - MER96B DNA MER1_type? -170 247 10 1774 146 0 0 chr2 74512448 74512701 -178743882 + AluJo SINE Alu 60 312 0 908 177 26 93 chr2 74512752 74513063 -178743520 - L1MD3 LINE L1 0 7995 7616 815 185 11 2 chr2 74513966 74514438 -178742145 + (TG)n Simple_repeat Simple_repeat 1 476 0 539 222 7 0 chr2 74514451 74514604 -178741979 + (TG)n Simple_repeat Simple_repeat 1 154 0 476 242 273 0 chr2 74516060 74516225 -178740358 - MIR SINE MIR -17 245 36 256 250 36 0 chr2 74516502 74516558 -178740025 + MIR SINE MIR 90 147 -115 432 255 43 21 chr2 74517780 74517921 -178738662 - MIR3 SINE MIR -3 205 62 627 259 56 78 chr2 74518208 74518474 -178738109 + MIR SINE MIR 1 262 0 182 118 0 59 chr2 74518584 74518618 -178737965 - L2 LINE L2 -212 3060 3029 237 289 58 8 chr2 74519550 74519671 -178736912 - L2 LINE L2 -181 3091 2965 192 314 0 0 chr2 74519798 74519849 -178736734 + MIR SINE MIR 57 107 -155 205 239 234 93 chr2 74520039 74520265 -178736318 + L2 LINE L2 3009 3266 -6 693 214 199 0 chr2 74525198 74525404 -178731179 + MIR SINE MIR 16 262 0 430 283 55 21 chr2 74525399 74525544 -178731039 + MIR SINE MIR 74 223 -39 * 456 158 12 0 chr2 74526474 74526556 -178730027 + L1MB7 LINE L1 5773 5855 -319 1551 135 14 28 chr2 74526656 74526945 -178729638 + L1MB7 LINE L1 5884 6168 -16 209 274 16 0 chr2 74526978 74527040 -178729543 + MIR SINE MIR 35 97 -111 312 218 54 103 chr2 74527262 74527531 -178729052 - L1MCa LINE L1 0 7025 1995 343 271 0 38 chr2 74527808 74527941 -178728642 - L1ME LINE L1 -510 5611 5484 310 227 267 20 chr2 74528057 74528207 -178728376 - L1ME LINE L1 -838 5308 5122 267 31 0 0 chr2 74528535 74528567 -178728016 + (TG)n Simple_repeat Simple_repeat 1 32 0 219 333 16 49 chr2 74528661 74528844 -178727739 + (TGGA)n Simple_repeat Simple_repeat 4 180 0 367 225 0 0 chr2 74529049 74529129 -178727454 - MER116 DNA Mariner 0 80 1 3513 179 21 37 chr2 74529239 74529599 -178726984 + L1MB4 LINE L1 5430 5794 -386 1627 156 107 3 chr2 74529599 74529926 -178726657 - MER46B DNA MER2_type 0 236 1 3513 179 21 37 chr2 74529926 74530327 -178726256 + L1MB4 LINE L1 5794 6179 -1 761 295 80 40 chr2 74531400 74531549 -178725034 + L1ME4a LINE L1 5267 5409 -712 1735 127 101 29 chr2 74531549 74531865 -178724718 - MER44D DNA MER2_type 0 609 1 761 295 80 40 chr2 74531865 74532338 -178724245 + L1ME4a LINE L1 5409 5914 -207 405 250 50 8 chr2 74532379 74532499 -178724084 + L1ME4a LINE L1 5992 6116 -5 216 224 20 0 chr2 74532833 74532882 -178723701 - MIR SINE MIR -88 120 71 433 260 137 59 chr2 74532941 74533145 -178723438 - MIR SINE MIR -16 246 27 204 322 115 44 chr2 74533163 74533346 -178723237 + MIR SINE MIR 39 234 -28 403 296 21 0 chr2 74535804 74535946 -178720637 - MER69A DNA AcHobo -3 174 30 251 263 62 0 chr2 74536303 74536383 -178720200 + MER5A DNA MER1_type 15 99 -90 349 262 81 34 chr2 74539986 74540135 -178716448 - MLT1K LTR MaLR -12 576 421 219 243 71 101 chr2 74540541 74540808 -178715775 - L2 LINE L2 -408 2906 2648 189 107 0 0 chr2 74541019 74541047 -178715536 + (TTCA)n Simple_repeat Simple_repeat 2 29 0 524 329 6 30 chr2 74541093 74541260 -178715323 - L2 LINE L2 -35 3237 3075 469 179 12 0 chr2 74541346 74541430 -178715153 + MER20 DNA MER1_type 4 88 -131 815 282 74 25 chr2 74541469 74541795 -178714788 + MLT1L LTR MaLR 264 605 -10 401 160 67 0 chr2 74541870 74541945 -178714638 + MER91B DNA MER1_type 51 130 -60 405 256 67 0 chr2 74541962 74542052 -178714531 + MER91B DNA MER1_type 90 185 -5 245 307 174 47 chr2 74542049 74542648 -178713935 + L2 LINE L2 1925 2599 -715 * 734 291 29 5 chr2 74544716 74544922 -178711661 + MIR SINE MIR 8 218 -44 462 212 136 8 chr2 74547429 74547561 -178709022 - MIR SINE MIR -16 246 98 558 292 164 55 chr2 74547788 74548154 -178708429 - L2 LINE L2 -1 3312 2907 479 253 93 11 chr2 74548503 74548857 -178707726 - L1ME4a LINE L1 -1 6120 5721 445 200 14 154 chr2 74550064 74550316 -178706267 + Charlie7 DNA MER1_type 326 535 -2077 2255 83 0 0 chr2 74550316 74550581 -178706002 + AluSq SINE Alu 2 266 -47 445 200 14 154 chr2 74550581 74550613 -178705970 + Charlie7 DNA MER1_type 535 570 -2042 213 195 0 0 chr2 74552415 74552456 -178704127 + G-rich Low_complexity Low_complexity 1 41 0 887 220 29 0 chr2 74553099 74553272 -178703311 + MER45A DNA AcHobo 1 178 0 202 266 202 21 chr2 74556002 74556096 -178700487 - L2 LINE L2 0 3272 3162 635 239 81 28 chr2 74558645 74558848 -178697735 - MIR SINE MIR -20 242 21 414 0 0 0 chr2 74559629 74559675 -178696908 + (TG)n Simple_repeat Simple_repeat 2 47 0 1574 185 43 56 chr2 74560385 74560779 -178695804 - MLT1B LTR MaLR -1 389 1 466 219 106 20 chr2 74560809 74560960 -178695623 + MER103 DNA DNA 3 166 0 2406 98 7 0 chr2 74561253 74561560 -178695023 - AluSg1 SINE Alu 0 309 1 419 236 169 27 chr2 74561850 74561998 -178694585 + MER5A DNA MER1_type 19 187 -2 390 42 0 0 chr2 74563005 74563053 -178693530 + (CAT)n Simple_repeat Simple_repeat 3 50 0 354 286 25 0 chr2 74563068 74563187 -178693396 - MER94 DNA DNA 0 134 13 310 246 17 25 chr2 74564487 74564605 -178691978 + (CATA)n Simple_repeat Simple_repeat 2 118 0 538 258 18 37 chr2 74566504 74566667 -178689916 + L2 LINE L2 3154 3313 0 642 347 33 30 chr2 74566719 74567117 -178689466 + L2 LINE L2 2511 2909 -405 192 324 120 9 chr2 74567270 74567378 -178689205 + L2 LINE L2 3148 3267 -5 216 298 0 0 chr2 74569143 74569200 -178687383 + MIR SINE MIR 95 151 -57 408 216 0 20 chr2 74571181 74571283 -178685300 - MLT1-int LTR MaLR -470 901 802 442 276 8 31 chr2 74571595 74571754 -178684829 - MIR SINE MIR -68 140 31 228 163 0 23 chr2 74571808 74571851 -178684732 + MER115 DNA AcHobo 1 42 -651 530 294 41 0 chr2 74573593 74573739 -178682844 + MIR SINE MIR 2 153 -109 369 333 15 0 chr2 74574042 74574316 -178682267 + (ATGGTG)n Simple_repeat Simple_repeat 1 278 0 4848 263 63 65 chr2 74574512 74575557 -178681026 + HAL1 LINE L1 2 1048 -1459 2097 110 37 13 chr2 74575557 74575857 -178680726 - AluSg SINE Alu -3 307 1 1751 218 0 0 chr2 74575867 74576160 -178680423 - AluJo SINE Alu -19 293 1 4848 263 63 65 chr2 74576160 74577613 -178678970 + HAL1 LINE L1 1057 2506 -1 264 317 5 54 chr2 74578108 74578294 -178678289 + (ATGGTG)n Simple_repeat Simple_repeat 1 177 0 207 394 0 25 chr2 74578319 74578479 -178678104 + (ATGGTG)n Simple_repeat Simple_repeat 4 159 0 493 333 53 18 chr2 74578769 74578996 -178677587 - MLT1I LTR MaLR -3 406 172 1365 279 57 5 chr2 74578996 74579380 -178677203 - MLT1I LTR MaLR 0 409 6 952 238 40 18 chr2 74579851 74580118 -178676465 - MLT1J1 LTR MaLR -159 287 15 321 271 135 30 chr2 74580126 74580259 -178676324 + L3 LINE CR1 1238 1384 -193 187 382 13 0 chr2 74580349 74580425 -178676158 - L3 LINE CR1 -112 1465 1389 203 222 0 22 chr2 74580911 74580956 -178675627 - L2 LINE L2 -5 3308 3265 2683 91 5 0 chr2 74581624 74581997 -178674586 - THE1C LTR MaLR 0 375 1 405 266 32 16 chr2 74582229 74582353 -178674230 - MIR SINE MIR -65 143 18 22 0 0 0 chr2 74582824 74582846 -178673737 + GC_rich Low_complexity Low_complexity 1 22 0 393 286 42 106 chr2 74584381 74584738 -178671845 + L2 LINE L2 2937 3270 -2 2563 85 33 3 chr2 74584945 74585309 -178671274 - THE1C LTR MaLR 0 375 1 215 256 108 36 chr2 74585377 74585572 -178671011 + L2 LINE L2 2921 3129 -143 291 54 0 0 chr2 74585841 74585878 -178670705 + (TG)n Simple_repeat Simple_repeat 2 38 0 327 268 31 21 chr2 74585911 74586008 -178670575 - L1MC4 LINE L1 -1350 6692 6595 46 45 0 0 chr2 74586008 74586075 -178670508 + AT_rich Low_complexity Low_complexity 1 67 0 1561 182 0 15 chr2 74586075 74586339 -178670244 - AluJo SINE Alu -22 290 31 966 103 4 0 chr2 74586665 74586899 -178669684 + (TA)n Simple_repeat Simple_repeat 1 235 0 371 331 23 29 chr2 74588534 74588706 -178667877 + MIR SINE MIR 89 259 -3 414 177 51 0 chr2 74588742 74588821 -178667762 + MIR SINE MIR 69 151 -57 1791 155 41 41 chr2 74589036 74589377 -178667206 - MER7A DNA MER2_type -7 339 1 6141 80 90 0 chr2 74590070 74591184 -178665399 - L1PA11 LINE L1 0 6174 5029 6840 144 9 1 chr2 74591185 74592341 -178664242 + L1PA11 LINE L1 3859 5023 -1123 1081 250 122 3 chr2 74592375 74592695 -178663888 - LTR16C LTR ERVL 0 491 134 2154 218 23 18 chr2 74592952 74593465 -178663118 + LTR40a LTR ERVL 4 519 0 180 111 0 0 chr2 74594796 74594823 -178661760 + (GAGAA)n Simple_repeat Simple_repeat 2 28 0 263 296 112 13 chr2 74596022 74596174 -178660409 - MIR3 SINE MIR -21 187 21 873 219 32 18 chr2 74597122 74597445 -178659138 + MSTD LTR MaLR 7 396 0 466 238 83 42 chr2 74597979 74598147 -178658436 + MIR3 SINE MIR 15 189 -19 818 233 54 46 chr2 74598924 74599164 -178657419 + MIR SINE MIR 21 262 0 206 220 40 0 chr2 74599190 74599240 -178657343 + L2 LINE L2 3262 3313 0 220 315 245 42 chr2 74600534 74600677 -178655906 - MER91A DNA MER1_type -24 172 1 1356 144 0 0 chr2 74601503 74601691 -178654892 - MER5A DNA MER1_type 0 189 2 362 270 56 8 chr2 74601780 74601906 -178654677 - L2 LINE L2 0 3272 3141 2152 264 72 65 chr2 74602646 74604216 -178652367 - HAL1 LINE L1 -90 2417 766 675 258 73 101 chr2 74604369 74604871 -178651712 + MLT1H1 LTR MaLR 3 443 -112 7404 111 61 15 chr2 74604871 74605386 -178651197 + Tigger3b DNA MER2_type 2 492 -2536 225 0 0 0 chr2 74605386 74605411 -178651172 + (TG)n Simple_repeat Simple_repeat 2 26 0 7404 111 61 15 chr2 74605411 74606070 -178650513 + Tigger3b DNA MER2_type 492 1230 -1 675 258 73 101 chr2 74606070 74606180 -178650403 + MLT1H1 LTR MaLR 443 555 0 546 267 91 5 chr2 74607823 74608033 -178648550 - MLT1H1 LTR MaLR -7 548 321 426 271 113 23 chr2 74608067 74608244 -178648339 - MLT1H1 LTR MaLR -282 267 75 686 303 74 86 chr2 74608508 74609033 -178647550 + LTR67 LTR ERVL 39 557 0 21 0 0 0 chr2 74609103 74609124 -178647459 + AT_rich Low_complexity Low_complexity 1 21 0 1269 142 5 15 chr2 74609138 74609342 -178647241 - MER2 DNA MER2_type -135 210 9 275 311 61 47 chr2 74609611 74609759 -178646824 + HAL1b LINE L1 349 498 -850 2483 219 45 48 chr2 74609827 74610627 -178645956 - L1M4 LINE L1 -1444 4702 3905 1261 218 37 35 chr2 74610615 74611019 -178645564 + L1MD2 LINE L1 4999 5403 -743 * 2509 62 0 10 chr2 74611027 74611336 -178645247 - AluY SINE Alu -5 306 1 3203 183 34 12 chr2 74611344 74611985 -178644598 + L1MD2 LINE L1 5702 6356 -3 248 334 169 6 chr2 74612011 74612526 -178644057 + L1 LINE L1 4067 4665 -1481 278 304 100 37 chr2 74613138 74613437 -178643146 - L1MEc LINE L1 -1487 4728 4411 296 153 85 0 chr2 74613568 74613627 -178642956 + MLT1K LTR MaLR 525 588 0 277 265 281 5 chr2 74613719 74613904 -178642679 - L1M4 LINE L1 -2302 3844 3609 8300 19 1 0 chr2 74614202 74615238 -178641345 + L1PA3 LINE L1 5141 6177 0 990 227 93 23 chr2 74615238 74615538 -178641045 - L1MEc LINE L1 -2186 4029 3709 340 360 59 36 chr2 74615770 74616168 -178640415 - HAL1b LINE L1 -696 652 391 2989 161 19 81 chr2 74616278 74616873 -178639710 - MER74A LTR ERVL 0 558 1 2149 152 82 3 chr2 74617029 74617384 -178639199 + Tigger3b DNA MER2_type 1 383 -848 741 269 70 18 chr2 74617570 74617971 -178638612 - L1MEc LINE L1 -2698 3517 3096 259 135 0 0 chr2 74617981 74618018 -178638565 - MER4A LTR ERV1 -71 593 557 2581 234 47 22 chr2 74618023 74618426 -178638157 - L1MEc LINE L1 -3105 3110 2718 1536 174 130 26 chr2 74618426 74618765 -178637818 - MLT1A2 LTR MaLR 0 374 1 2581 234 47 22 chr2 74618765 74619220 -178637363 - L1MEc LINE L1 -3497 2718 2231 934 173 7 0 chr2 74619254 74619404 -178637179 + MER58B DNA MER1_type 191 341 0 1768 246 89 18 chr2 74619404 74620067 -178636516 - L1MEc LINE L1 -4121 2275 1566 861 198 217 19 chr2 74620068 74620213 -178636370 - AluSg1 SINE Alu 0 309 194 180 0 0 0 chr2 74620213 74620233 -178636350 + (TTG)n Simple_repeat Simple_repeat 2 21 0 861 198 217 19 chr2 74620233 74620345 -178636238 - AluSg1 SINE Alu -115 194 1 1565 269 63 63 chr2 74620346 74621349 -178635234 - L1MEc LINE L1 -4815 1581 579 391 316 77 5 chr2 74621544 74621740 -178634843 - L1MEc LINE L1 -6095 301 92 238 229 60 12 chr2 74621922 74622005 -178634578 - L1ME4a LINE L1 -109 6012 5926 368 304 112 45 chr2 74622170 74622482 -178634101 + L1M4 LINE L1 4315 4647 -1499 851 195 97 5 chr2 74622947 74623132 -178633451 + L1MC4 LINE L1 6460 6661 -1381 1449 232 160 13 chr2 74623137 74623605 -178632978 - MLT1F1 LTR MaLR 0 567 31 802 46 40 26 chr2 74623620 74623771 -178632812 + (TAGA)n Simple_repeat Simple_repeat 4 156 0 345 202 181 11 chr2 74623771 74623860 -178632723 + L1MC4 LINE L1 6694 6798 -1244 310 281 129 7 chr2 74623882 74624052 -178632531 + L1MD3 LINE L1 6620 6763 -1232 436 259 114 12 chr2 74624078 74624244 -178632339 + L1MC4 LINE L1 6616 6798 -1244 1348 212 108 16 chr2 74624270 74625418 -178631165 + L1MC4 LINE L1 6616 7903 -139 397 296 34 50 chr2 74625731 74625859 -178630724 + MIR SINE MIR 87 213 -49 2411 180 85 36 chr2 74625859 74626282 -178630301 + MLT2B1 LTR ERVL 1 453 -67 1653 170 19 42 chr2 74626282 74626594 -178629989 - AluJo SINE Alu -5 307 3 2411 180 85 36 chr2 74626594 74626665 -178629918 + MLT2B1 LTR ERVL 453 519 -1 397 296 34 50 chr2 74626665 74626715 -178629868 + MIR SINE MIR 213 262 0 711 335 69 33 chr2 74626725 74627533 -178629050 - L1MEd LINE L1 -2926 3203 2367 2357 137 33 0 chr2 74628088 74628425 -178628158 - MER7A DNA MER2_type 0 346 1 237 222 12 49 chr2 74628479 74628560 -178628023 + L1MC4 LINE L1 6619 6696 -1346 446 247 13 0 chr2 74628759 74628909 -178627674 + (CACCAT)n Simple_repeat Simple_repeat 5 156 0 375 314 0 16 chr2 74628934 74629055 -178627528 + MIR SINE MIR 19 137 -71 962 331 159 40 chr2 74630881 74631504 -178625079 - L3 LINE CR1 -106 1471 709 2381 163 31 100 chr2 74631504 74632043 -178624540 - MLT1D LTR MaLR -1 504 3 962 331 159 40 chr2 74632043 74632306 -178624277 - L3 LINE CR1 -868 709 479 194 256 24 37 chr2 74632376 74632458 -178624125 - L2 LINE L2 -65 3248 3168 937 280 46 65 chr2 74632507 74632875 -178623708 - MLT1J LTR MaLR -51 460 100 1225 214 104 26 chr2 74632897 74633318 -178623265 + L1ME2 LINE L1 4862 5315 -831 1316 216 97 22 chr2 74633349 74633668 -178622915 - MER2 DNA MER2_type 0 344 2 2154 198 80 38 chr2 74633668 74634243 -178622340 + L1ME2 LINE L1 5565 6163 -1 278 354 23 8 chr2 74634243 74634373 -178622210 + L3 LINE CR1 840 971 -606 908 278 88 49 chr2 74634421 74635919 -178620664 - L1MEd LINE L1 -3948 2362 755 584 251 39 39 chr2 74636500 74636703 -178619880 - MIR SINE MIR -38 224 22 665 305 17 0 chr2 74636954 74637193 -178619390 + L2 LINE L2 2141 2383 -931 924 305 142 7 chr2 74637512 74637941 -178618642 + LTR16C LTR ERVL 3 489 -2 504 214 0 0 chr2 74638150 74638262 -178618321 + (TG)n Simple_repeat Simple_repeat 1 112 0 392 303 33 40 chr2 74639676 74639828 -178616755 + L2 LINE L2 3132 3282 -31 267 331 107 10 chr2 74639868 74640158 -178616425 - L2 LINE L2 -107 3165 2848 1190 294 140 19 chr2 74640416 74641185 -178615398 - L2 LINE L2 -245 3068 2194 201 74 0 0 chr2 74641559 74641586 -178614997 + (A)n Simple_repeat Simple_repeat 1 27 0 450 274 52 18 chr2 74642246 74642459 -178614124 + MLT1I LTR MaLR 1 222 -224 302 254 14 0 chr2 74642535 74642606 -178613977 + MLT1I LTR MaLR 337 408 -1 1692 137 0 24 chr2 74643017 74643272 -178613311 + AluJb SINE Alu 44 292 -20 2555 163 41 7 chr2 74643445 74643857 -178612726 - MSTB LTR MaLR 0 426 1 355 270 11 22 chr2 74643864 74643953 -178612630 - L2 LINE L2 -2 3270 3183 477 274 33 20 chr2 74648373 74648526 -178608057 - MIR SINE MIR -22 240 86 246 260 111 111 chr2 74649379 74649587 -178606996 + LTR67 LTR ERVL 329 536 -21 391 340 83 42 chr2 74649769 74650010 -178606573 + MIR SINE MIR 6 256 -6 631 259 65 72 chr2 74650031 74650447 -178606136 + MLT1H LTR MaLR 23 549 0 328 313 43 9 chr2 74650447 74650562 -178606021 - MLT1L LTR MaLR -81 534 416 242 313 23 109 chr2 74650659 74650915 -178605668 - MLT1J LTR MaLR -242 269 36 225 259 35 0 chr2 74650924 74650982 -178605601 - L2 LINE L2 -14 3299 3240 3616 123 80 6 chr2 74654313 74654973 -178601610 + Tigger3(Golem) DNA MER2_type 2321 3029 0 1774 300 69 76 chr2 74654985 74655018 -178601565 - L1M4c LINE L1 -2912 3470 3438 3591 119 44 0 chr2 74655018 74655564 -178601019 - L1PA16 LINE L1 -9 6157 5588 1774 300 69 76 chr2 74655564 74656343 -178600240 - L1M4c LINE L1 -2944 3438 2655 338 22 43 0 chr2 74656343 74656389 -178600194 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 1297 179 66 33 chr2 74656391 74656664 -178599919 - AluJo SINE Alu -30 282 1 983 222 0 6 chr2 74656667 74656843 -178599740 - FAM SINE Alu 0 175 1 1774 300 69 76 chr2 74656843 74657298 -178599285 - L1M4c LINE L1 -3730 2652 2210 558 306 19 55 chr2 74658568 74658839 -178597744 - MIR SINE MIR 0 262 2 2041 142 0 3 chr2 74658913 74659216 -178597367 - AluSx SINE Alu -10 302 1 1048 233 63 8 chr2 74660344 74660597 -178595986 - MLT1I LTR MaLR -4 405 139 488 309 0 0 chr2 74660769 74660892 -178595691 + MIR SINE MIR 29 151 -111 228 159 32 16 chr2 74661952 74662015 -178594568 + CT-rich Low_complexity Low_complexity 1 64 0 390 21 0 0 chr2 74662015 74662062 -178594521 + (CA)n Simple_repeat Simple_repeat 1 47 0 251 361 19 9 chr2 74662329 74662437 -178594146 + MLT1K LTR MaLR 140 248 -340 396 318 91 17 chr2 74662566 74662774 -178593809 + MLT1K LTR MaLR 388 588 0 231 36 0 0 chr2 74662996 74663024 -178593559 + (TG)n Simple_repeat Simple_repeat 1 28 0 374 139 14 0 chr2 74663024 74663096 -178593487 + GA-rich Low_complexity Low_complexity 2 74 0 668 174 0 62 chr2 74663593 74663737 -178592846 + FRAM SINE Alu 40 174 -2 952 214 24 0 chr2 74665261 74665471 -178591112 - L1ME LINE L1 -480 5686 5472 463 309 99 6 chr2 74665593 74665755 -178590828 + MIR SINE MIR 52 228 -34 260 320 0 0 chr2 74665770 74665845 -178590738 - MER91A DNA MER1_type -25 171 97 1738 150 10 29 chr2 74666171 74666478 -178590105 + AluJo SINE Alu 1 301 -11 204 269 54 0 chr2 74668060 74668153 -178588430 - MIR SINE MIR -63 145 48 246 248 171 29 chr2 74670626 74670731 -178585852 - MIR SINE MIR -59 149 30 2131 112 6 10 chr2 74671130 74671444 -178585139 - AluSp SINE Alu 0 313 1 188 192 61 6 chr2 74671498 74671547 -178585036 + MIR SINE MIR 99 149 -65 459 280 97 21 chr2 74671690 74671876 -178584707 + MIR SINE MIR 63 262 0 221 196 29 29 chr2 74674604 74674706 -178581877 + CT-rich Low_complexity Low_complexity 2 103 0 313 342 27 38 chr2 74676420 74676604 -178579979 + L3 LINE CR1 1289 1470 -107 181 302 0 0 chr2 74677071 74677114 -178579469 + L2 LINE L2 3136 3178 -94 202 278 69 28 chr2 74678668 74678740 -178577843 + L3 LINE CR1 1394 1468 -109 192 360 30 0 chr2 74679188 74679288 -178577295 + L2 LINE L2 3146 3248 -24 255 288 192 16 chr2 74680156 74680281 -178576302 - L3 LINE CR1 -9 1568 1422 323 314 75 25 chr2 74681950 74682109 -178574474 - MIR SINE MIR -73 189 23 186 311 44 22 chr2 74686011 74686101 -178570482 + L3b LINE CR1 1298 1389 -194 1246 229 184 50 chr2 74688241 74688725 -178567858 + MLT1H LTR MaLR 1 549 0 319 255 5 14 chr2 74688902 74689115 -178567468 + (ATGGTG)n Simple_repeat Simple_repeat 1 210 0 261 105 0 0 chr2 74689116 74689154 -178567429 - U2 snRNA snRNA -150 38 1 254 286 0 12 chr2 74689219 74689380 -178567203 + (ATG)n Simple_repeat Simple_repeat 1 159 0 430 315 123 0 chr2 74690763 74690909 -178565674 + MER91A DNA MER1_type 24 187 -9 382 336 95 32 chr2 74691084 74691626 -178564957 - L2 LINE L2 -72 3200 2635 182 170 0 43 chr2 74692022 74692069 -178564514 + GA-rich Low_complexity Low_complexity 1 45 0 213 39 0 0 chr2 74694434 74694460 -178562123 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 276 274 18 62 chr2 74694460 74694573 -178562010 - L2 LINE L2 -17 3296 3189 194 333 0 40 chr2 74698019 74698094 -178558489 - L3 LINE CR1 -428 1149 1078 257 333 68 8 chr2 74698101 74698218 -178558365 - L2 LINE L2 -1 3271 3148 845 223 5 24 chr2 74698224 74698430 -178558153 + MER3 DNA MER1_type 7 208 -1 204 318 64 0 chr2 74698538 74698648 -178557935 - L2 LINE L2 -206 3066 2950 1076 356 42 24 chr2 74699247 74699870 -178556713 + L2 LINE L2 2324 2957 -357 340 291 229 0 chr2 74699908 74700087 -178556496 + L2 LINE L2 3077 3296 -17 267 246 227 0 chr2 74700699 74700809 -178555774 + MIR SINE MIR 2 136 -126 23 0 0 0 chr2 74701252 74701275 -178555308 + AT_rich Low_complexity Low_complexity 1 23 0 355 322 115 11 chr2 74701522 74701696 -178554887 + MLT1K LTR MaLR 3 194 -394 26 0 0 0 chr2 74701851 74701877 -178554706 + AT_rich Low_complexity Low_complexity 1 26 0 327 304 81 52 chr2 74702128 74702454 -178554129 + L1ME LINE L1 4524 4872 -1274 2985 88 0 3 chr2 74702454 74702830 -178553753 - THE1C LTR MaLR 0 375 1 327 304 81 52 chr2 74702830 74703019 -178553564 + L1ME LINE L1 4872 5054 -1092 3002 161 61 24 chr2 74703027 74703666 -178552917 - L1MB8 LINE L1 -6 6172 5510 22 0 0 0 chr2 74703694 74703716 -178552867 + AT_rich Low_complexity Low_complexity 1 22 0 6295 148 14 13 chr2 74703725 74705291 -178551292 - L1MA6 LINE L1 0 6300 4895 424 285 55 37 chr2 74705348 74705823 -178550760 + L1ME LINE L1 5122 5603 -567 324 102 0 0 chr2 74706173 74706222 -178550361 + (CA)n Simple_repeat Simple_repeat 1 49 0 461 328 29 47 chr2 74707012 74707522 -178549061 + HAL1 LINE L1 1109 1609 -898 266 404 10 0 chr2 74708219 74708323 -178548260 + MIR SINE MIR 14 118 -144 192 167 0 0 chr2 74708382 74708412 -178548171 + L2 LINE L2 3218 3247 -25 377 293 83 32 chr2 74710133 74710386 -178546197 - L1ME4a LINE L1 -8 6113 5848 435 224 87 33 chr2 74710464 74710647 -178545936 - L1MC5 LINE L1 -37 7924 7732 265 222 263 10 chr2 74711092 74711191 -178545392 - MIR SINE MIR -63 145 22 204 194 0 0 chr2 74712156 74712192 -178544391 + CT-rich Low_complexity Low_complexity 2 37 0 278 334 210 27 chr2 74713611 74714210 -178542373 + L2 LINE L2 2248 2956 -358 331 232 16 72 chr2 74714313 74714438 -178542145 + MARNA DNA Mariner 172 289 -297 728 265 24 4 chr2 74714450 74714851 -178541732 - LTR16B LTR ERVL -18 446 1 273 163 12 25 chr2 74715155 74715235 -178541348 + (TCCA)n Simple_repeat Simple_repeat 2 80 0 359 305 33 93 chr2 74715237 74715388 -178541195 - L2 LINE L2 -2 3270 3129 200 254 18 0 chr2 74716100 74716155 -178540428 - L2 LINE L2 -79 3193 3138 258 255 85 21 chr2 74716905 74716999 -178539584 - MIR3 SINE MIR -3 205 106 333 68 0 0 chr2 74717100 74717144 -178539439 + (TCCC)n Simple_repeat Simple_repeat 1 44 0 1661 183 35 0 chr2 74717144 74717429 -178539154 - AluJb SINE Alu -17 295 1 431 333 163 27 chr2 74717439 74717880 -178538703 - L1M4 LINE L1 -3435 2711 2211 889 183 92 52 chr2 74718548 74718799 -178537784 + ORSL DNA AcHobo 2 262 -13 992 159 91 48 chr2 74719313 74719521 -178537062 - MER20 DNA MER1_type -2 217 1 392 158 13 0 chr2 74719642 74719718 -178536865 + CT-rich Low_complexity Low_complexity 3 79 0 697 261 10 55 chr2 74720832 74721031 -178535552 + MER91B DNA MER1_type 1 190 0 538 196 9 0 chr2 74721135 74721247 -178535336 - L1ME3 LINE L1 -1 6161 6049 2001 146 3 29 chr2 74721268 74721584 -178534999 - AluSq SINE Alu -5 308 1 333 281 195 29 chr2 74721705 74721915 -178534668 - HAL1b LINE L1 -593 755 511 4739 174 21 11 chr2 74721924 74723451 -178533132 - L1MC1 LINE L1 -268 6065 4520 187 293 50 50 chr2 74724034 74724133 -178532450 - L2 LINE L2 -1813 1501 1403 1152 196 79 93 chr2 74724207 74724574 -178532009 + MLT1A1 LTR MaLR 1 362 -3 259 316 102 45 chr2 74725342 74725519 -178531064 + MIR3 SINE MIR 15 201 -7 2290 98 0 7 chr2 74725744 74726200 -178530383 + AluSx SINE Alu 1 454 0 242 368 0 7 chr2 74728372 74728508 -178528075 + (TGG)n Simple_repeat Simple_repeat 1 135 0 180 83 0 0 chr2 74728744 74728768 -178527815 + MER5A DNA MER1_type 8 31 -158 398 276 8 45 chr2 74729006 74729140 -178527443 - MER5B DNA MER1_type -26 152 24 477 47 0 0 chr2 74729142 74729206 -178527377 + (CA)n Simple_repeat Simple_repeat 2 65 0 183 204 19 37 chr2 74730027 74730081 -178526502 + MIR3 SINE MIR 15 67 -141 369 0 0 0 chr2 74730893 74730934 -178525649 + (TG)n Simple_repeat Simple_repeat 1 41 0 2284 186 8 49 chr2 74731329 74731861 -178524722 + L1ME1 LINE L1 5650 6159 -7 798 265 19 89 chr2 74731999 74732176 -178524407 + MSTD LTR MaLR 1 189 -207 1803 122 22 83 chr2 74732176 74732488 -178524095 + AluSx SINE Alu 9 301 -11 798 265 19 89 chr2 74732488 74732736 -178523847 + MSTD LTR MaLR 189 396 0 241 295 6 114 chr2 74732893 74733059 -178523524 - L2 LINE L2 -174 3098 2951 215 219 78 31 chr2 74735019 74735083 -178521500 - MIR3 SINE MIR -22 186 120 191 167 308 39 chr2 74735885 74735963 -178520620 + MIR3 SINE MIR 6 104 -104 187 349 0 0 chr2 74736154 74736217 -178520366 + MIR SINE MIR 47 109 -99 371 198 125 21 chr2 74736240 74736336 -178520247 + MIR SINE MIR 2 107 -155 207 214 45 79 chr2 74736378 74736467 -178520116 + MIR3 SINE MIR 113 198 -10 189 147 0 0 chr2 74736901 74736935 -178519648 + (TG)n Simple_repeat Simple_repeat 2 35 0 219 36 0 0 chr2 74736935 74736963 -178519620 + (GA)n Simple_repeat Simple_repeat 1 28 0 208 312 111 21 chr2 74738240 74738356 -178518227 - MIR SINE MIR -62 146 40 323 328 105 6 chr2 74739040 74739211 -178517372 - MIR SINE MIR -6 256 69 253 272 136 0 chr2 74739257 74739338 -178517245 - MLT1I LTR MaLR 0 409 318 258 333 46 11 chr2 74740556 74740643 -178515940 + L2 LINE L2 2239 2328 -986 273 224 12 82 chr2 74740704 74740789 -178515794 + LTR67 LTR ERVL 77 155 -402 325 276 235 15 chr2 74740810 74741078 -178515505 + MLT1L LTR MaLR 254 580 -35 396 354 96 33 chr2 74741364 74741760 -178514823 + L2 LINE L2 2851 3271 -1 851 260 53 23 chr2 74741810 74742271 -178514312 - MLT1G3 LTR MaLR -7 588 71 2169 136 144 5 chr2 74742271 74742647 -178513936 + MSTA LTR MaLR 1 428 0 851 260 53 23 chr2 74742647 74742721 -178513862 - MLT1G3 LTR MaLR -524 71 1 2305 121 0 0 chr2 74742724 74743029 -178513554 + AluSg SINE Alu 1 305 -5 285 337 26 23 chr2 74743176 74743347 -178513236 + MIR3 SINE MIR 9 182 -68 243 266 70 23 chr2 74743399 74743527 -178513056 - LTR67 LTR ERVL 0 557 424 818 255 115 14 chr2 74743685 74743963 -178512620 + MLT1I LTR MaLR 1 306 -103 564 280 32 0 chr2 74744598 74744723 -178511860 + L2 LINE L2 3144 3272 0 * 1530 310 159 19 chr2 74744720 74745506 -178511077 - L3 LINE CR1 -457 1120 225 511 200 21 0 chr2 74747353 74747448 -178509135 + MIR SINE MIR 41 137 -125 226 162 29 73 chr2 74747450 74747518 -178509065 - HsTC2 DNA Tc2 -613 1285 1221 * 547 157 65 19 chr2 74747511 74747619 -178508964 - HsTC2 DNA Tc2 -1782 116 4 422 207 12 0 chr2 74747622 74747704 -178508879 + MIR SINE MIR 153 235 -27 405 313 26 31 chr2 74747976 74748168 -178508415 + MLT1J2 LTR MaLR 239 429 -21 256 192 27 68 chr2 74749834 74749907 -178506676 + CT-rich Low_complexity Low_complexity 4 73 0 756 76 15 15 chr2 74750887 74751018 -178505565 + (TAGA)n Simple_repeat Simple_repeat 3 133 0 219 253 137 21 chr2 74751018 74751113 -178505470 + L2 LINE L2 3175 3280 -33 216 67 0 0 chr2 74751115 74751145 -178505438 + (TGGA)n Simple_repeat Simple_repeat 3 32 0 588 318 118 9 chr2 74751438 74751649 -178504934 + MIR SINE MIR 4 237 -25 276 325 18 18 chr2 74753547 74753661 -178502922 - MER5A DNA MER1_type 0 189 76 2115 148 44 14 chr2 74754122 74754486 -178502097 + THE1C LTR MaLR 1 375 0 195 42 0 0 chr2 74754883 74754907 -178501676 + (TC)n Simple_repeat Simple_repeat 1 24 0 238 255 0 0 chr2 74754957 74755004 -178501579 + tRNA-Gly-GGG tRNA tRNA 21 67 -7 1048 277 20 0 chr2 74755024 74755277 -178501306 + MIR SINE MIR 5 262 0 909 262 122 25 chr2 74755850 74755976 -178500607 + LTR16A LTR ERVL 1 113 -337 1730 216 195 8 chr2 74755976 74756454 -178500129 - MLT1F1 LTR MaLR 0 567 1 909 262 122 25 chr2 74756454 74756648 -178499935 + LTR16A LTR ERVL 113 352 -98 390 91 20 50 chr2 74756654 74756753 -178499830 + (TTCC)n Simple_repeat Simple_repeat 1 96 0 373 276 16 0 chr2 74756753 74756880 -178499703 + LTR16A LTR ERVL 320 448 -2 367 283 101 32 chr2 74757008 74757227 -178499356 - L1M4 LINE L1 -1109 5037 4804 492 266 122 58 chr2 74757236 74757514 -178499069 - L1M4 LINE L1 -1376 4770 4475 411 289 98 62 chr2 74757639 74757895 -178498688 - L1M4 LINE L1 -1714 4432 4168 381 261 120 56 chr2 74758037 74758612 -178497971 - L1ME4a LINE L1 -121 6000 5389 1021 290 90 15 chr2 74759076 74759620 -178496963 - L1ME3A LINE L1 -219 5951 5367 611 322 75 12 chr2 74759691 74760181 -178496402 - L1ME3A LINE L1 -893 5253 4733 384 319 22 35 chr2 74761049 74761281 -178495302 - L1MC4a LINE L1 -1861 5947 5719 281 295 49 41 chr2 74762530 74762688 -178493895 + MIR SINE MIR 16 173 -58 1608 37 0 0 chr2 74763059 74763248 -178493335 - L1P LINE L1 -1443 4703 4515 * 2372 227 43 34 chr2 74763246 74764039 -178492544 + L1ME1 LINE L1 3948 4747 -1399 1042 262 23 27 chr2 74764038 74764355 -178492228 + L1ME1 LINE L1 5863 6333 -1 * 414 278 160 35 chr2 74764551 74764864 -178491719 - HAL1b LINE L1 -606 742 391 594 313 94 47 chr2 74765081 74765556 -178491027 + L1M4 LINE L1 3403 3931 -2215 1023 211 9 17 chr2 74765556 74765788 -178490795 + L1ME4a LINE L1 20 249 -6174 * 1146 247 63 97 chr2 74765781 74766008 -178490575 + L1ME4a LINE L1 1102 1335 -5561 756 171 0 23 chr2 74766008 74766137 -178490446 - FLAM_A SINE Alu -3 130 5 1146 247 63 97 chr2 74766137 74766784 -178489799 + L1ME4a LINE L1 1335 2009 -4887 3519 190 50 18 chr2 74766792 74767999 -178488584 + L1ME4a LINE L1 5357 6524 -437 1944 148 42 3 chr2 74767999 74768329 -178488254 - MER2 DNA MER2_type -1 343 1 3519 190 50 18 chr2 74768329 74768432 -178488151 + L1ME4a LINE L1 6524 6622 -339 2227 124 117 33 chr2 74768432 74768608 -178487975 + MSTA LTR MaLR 1 161 -267 2133 106 7 3 chr2 74768608 74768910 -178487673 + AluSq SINE Alu 1 303 -10 2227 124 117 33 chr2 74768910 74769128 -178487455 + MSTA LTR MaLR 161 428 0 3519 190 50 18 chr2 74769128 74769170 -178487413 + L1ME4a LINE L1 6622 6757 -204 557 336 74 8 chr2 74769441 74769685 -178486898 - MIR SINE MIR -2 260 1 243 0 0 0 chr2 74769717 74769744 -178486839 + (CA)n Simple_repeat Simple_repeat 2 28 0 300 224 112 22 chr2 74769752 74769886 -178486697 + L1ME4a LINE L1 6769 6914 -2 263 206 29 29 chr2 74771157 74771225 -178485358 - MIR3 SINE MIR -12 196 129 359 314 38 9 chr2 74771645 74771750 -178484833 - MIR SINE MIR -140 122 15 645 286 5 62 chr2 74772076 74772300 -178484283 - MIR SINE MIR -19 243 33 447 268 95 12 chr2 74772520 74772690 -178483893 + MIR SINE MIR 24 207 -55 615 322 22 6 chr2 74774310 74774490 -178482093 + MER91A DNA MER1_type 1 183 -13 402 237 50 14 chr2 74774897 74775036 -178481547 + LTR33 LTR ERVL 2 145 -376 367 286 76 15 chr2 74775176 74775564 -178481019 - LTR16C LTR ERVL -2 489 26 193 284 45 0 chr2 74777362 74777450 -178479133 + MIR SINE MIR 36 127 -81 548 265 20 0 chr2 74777489 74777640 -178478943 + MER58B DNA MER1_type 186 339 -2 1969 129 3 10 chr2 74778990 74779299 -178477284 - AluSq SINE Alu -6 307 1 207 0 0 0 chr2 74779778 74779801 -178476782 + (A)n Simple_repeat Simple_repeat 1 23 0 219 309 65 41 chr2 74781228 74781351 -178475232 - L2 LINE L2 -835 2479 2354 189 262 24 0 chr2 74782728 74782770 -178473813 + L2 LINE L2 2433 2475 -839 747 288 62 69 chr2 74783678 74784098 -178472485 - LTR16A1 LTR ERVL -40 417 1 2011 106 0 0 chr2 74786178 74786474 -178470109 - AluSg SINE Alu 0 303 8 234 91 0 0 chr2 74786572 74786605 -178469978 + (CGGGGG)n Simple_repeat Simple_repeat 4 36 0 378 244 40 57 chr2 74786688 74786831 -178469752 - MIR3 SINE MIR -37 171 30 559 271 90 0 chr2 74786951 74787106 -178469477 - MIR SINE MIR -73 189 21 1025 137 0 0 chr2 74787480 74787657 -178468926 - FRAM SINE Alu 0 177 1 225 262 0 58 chr2 74787970 74788073 -178468510 + GA-rich Low_complexity Low_complexity 3 99 0 256 259 0 17 chr2 74788668 74788726 -178467857 + MIR SINE MIR 202 258 -4 416 242 199 27 chr2 74788895 74789081 -178467502 + MIR SINE MIR 39 256 -6 182 171 29 0 chr2 74789605 74789640 -178466943 + L2 LINE L2 3154 3189 -83 314 190 139 0 chr2 74789821 74789900 -178466683 - MIR SINE MIR -60 202 113 302 303 25 17 chr2 74790797 74790916 -178465667 + L2 LINE L2 1805 1924 -1390 810 173 0 7 chr2 74790945 74791084 -178465499 - FLAM_C SINE Alu -4 139 2 289 258 208 38 chr2 74791088 74791343 -178465240 + L2 LINE L2 1986 2289 -1025 240 59 0 0 chr2 74791343 74791377 -178465206 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 254 308 126 50 chr2 74791389 74791548 -178465035 - L2 LINE L2 -23 3249 3079 619 251 230 8 chr2 74791550 74791789 -178464794 - MLT2E LTR ERVL 0 628 337 346 328 35 59 chr2 74791833 74792120 -178464463 + L2 LINE L2 2593 2872 -442 333 326 18 60 chr2 74792199 74792475 -178464108 + L2 LINE L2 2965 3312 -1 253 210 68 78 chr2 74792517 74792722 -178463861 + L1ME4a LINE L1 5866 6068 -53 2081 135 0 3 chr2 74793642 74794075 -178462508 - AluSg SINE Alu 0 432 1 209 349 111 57 chr2 74794211 74794653 -178461930 - L2 LINE L2 -518 2796 2319 2285 157 56 19 chr2 74794653 74795066 -178461517 + MSTA LTR MaLR 1 428 0 209 349 111 57 chr2 74795066 74795153 -178461430 - L2 LINE L2 -995 2319 2238 329 362 110 25 chr2 74795325 74795607 -178460976 - L2 LINE L2 -781 2533 2228 * 519 362 6 0 chr2 74795601 74795764 -178460819 - MIR3 SINE MIR 0 208 45 484 261 62 72 chr2 74795901 74796177 -178460406 - MLT1K LTR MaLR -5 583 311 276 77 0 0 chr2 74797554 74797593 -178458990 + (TGGA)n Simple_repeat Simple_repeat 4 42 0 1177 250 4 4 chr2 74798165 74798413 -178458170 - MIR SINE MIR -3 259 12 610 281 40 43 chr2 74798571 74798944 -178457639 + L1MC5 LINE L1 7326 7697 -264 745 206 52 0 chr2 74798968 74799123 -178457460 + MER82 DNA MER2_type 1 163 -490 36851 31 19 1 chr2 74799128 74805135 -178451448 - L1PA3 LINE L1 0 6155 13 2313 224 35 4 chr2 74805136 74805627 -178450956 + MER82 DNA MER2_type 148 653 0 246 250 28 83 chr2 74805628 74805772 -178450811 + L1MC5 LINE L1 7733 7868 -93 491 256 104 78 chr2 74805782 74806232 -178450351 - LTR16B LTR ERVL -2 462 1 799 164 44 79 chr2 74806346 74806642 -178449941 + MSTD LTR MaLR 19 396 0 429 264 69 26 chr2 74806761 74806998 -178449585 - L1ME4a LINE L1 -188 5933 5680 2331 215 7 28 chr2 74807221 74807820 -178448763 - L1ME4a LINE L1 -826 5320 4735 1152 177 57 10 chr2 74807985 74808194 -178448389 + MER21B LTR ERV1 1 219 -644 1290 128 119 4 chr2 74808217 74808444 -178448139 - MER41B LTR ERV1 -88 547 295 * 3629 180 36 3 chr2 74808441 74809084 -178447499 + MER21B LTR ERV1 200 863 0 264 214 126 10 chr2 74809250 74809353 -178447230 - L1ME4a LINE L1 -12 6178 6064 752 266 102 35 chr2 74809373 74809884 -178446699 - L1ME4a LINE L1 -198 5992 5448 851 318 60 18 chr2 74810136 74810535 -178446048 - LTR33 LTR ERVL -105 416 1 1414 210 208 9 chr2 74810771 74811194 -178445389 + MLT1J LTR MaLR 4 510 -1 368 287 74 45 chr2 74811250 74811452 -178445131 - MIR SINE MIR -26 236 29 534 185 84 8 chr2 74812327 74812446 -178444137 - L1MB5 LINE L1 -1174 5041 4914 * 921 226 68 0 chr2 74812430 74812696 -178443887 + L1MB5 LINE L1 5013 5296 -919 1119 170 36 5 chr2 74812696 74812890 -178443693 + AluJo SINE Alu 87 286 -26 4251 190 16 11 chr2 74812900 74813700 -178442883 + L1MB5 LINE L1 5326 6129 -114 768 215 0 0 chr2 74813702 74813832 -178442751 + FLAM_A SINE Alu 6 135 -7 391 214 41 0 chr2 74813833 74813931 -178442652 + L1MB5 LINE L1 6112 6213 -30 * 720 204 46 15 chr2 74813915 74814111 -178442472 - L1M4 LINE L1 -981 5165 4964 583 233 20 7 chr2 74814118 74814264 -178442319 - L1ME4a LINE L1 -1496 4719 4572 5810 54 0 3 chr2 74814264 74814936 -178441647 - L1PA5 LINE L1 0 6154 5485 2730 106 64 7 chr2 74814936 74815341 -178441242 - L1P LINE L1 -5716 430 3 2974 227 62 29 chr2 74815343 74816255 -178440328 - L1ME4a LINE L1 -1636 4579 3637 7567 189 77 76 chr2 74816268 74820146 -178436437 + L1PB3 LINE L1 2792 6863 -7 222 283 31 6 chr2 74820174 74820333 -178436250 + (TA)n Simple_repeat Simple_repeat 1 163 0 787 260 88 6 chr2 74820333 74820672 -178435911 - L1ME4a LINE L1 -2570 3645 3279 2132 116 7 16 chr2 74820684 74820994 -178435589 - AluSx SINE Alu -5 307 1 3222 268 59 4 chr2 74821351 74822663 -178433920 - L1MEc LINE L1 -2974 3241 1895 458 275 75 41 chr2 74822669 74823100 -178433483 + L1MC4a LINE L1 1053 1532 -4894 2119 233 58 109 chr2 74823125 74824328 -178432255 + L1MC4a LINE L1 2085 3348 -3078 2472 77 3 0 chr2 74824328 74824638 -178431945 - AluSp SINE Alu -2 311 1 622 47 24 35 chr2 74824648 74824771 -178431812 - L1PA7 LINE L1 0 6154 6071 2119 233 58 109 chr2 74824771 74825089 -178431494 + L1MC4a LINE L1 3357 3514 -2912 336 70 23 0 chr2 74825089 74825132 -178431451 + tRNA-Lys-AAG tRNA tRNA 1 44 -32 2119 233 58 109 chr2 74825132 74825523 -178431060 + L1MC4a LINE L1 3514 3923 -2503 562 294 86 63 chr2 74825580 74826110 -178430473 + L1MC4a LINE L1 5657 6090 -344 297 0 0 0 chr2 74826122 74826155 -178430428 + (TG)n Simple_repeat Simple_repeat 2 34 0 558 263 80 38 chr2 74826641 74826854 -178429729 + L2 LINE L2 3092 3313 0 603 260 39 7 chr2 74827834 74827988 -178428595 - MIR SINE MIR -70 192 34 429 331 8 0 chr2 74829585 74829712 -178426871 - MIR SINE MIR -122 140 13 222 191 0 0 chr2 74830027 74830074 -178426509 + T-rich Low_complexity Low_complexity 3 49 0 2017 125 7 0 chr2 74830079 74830367 -178426216 - AluJb SINE Alu -2 310 21 1220 330 161 25 chr2 74830899 74831613 -178424970 + L3 LINE CR1 85 895 -682 321 260 115 10 chr2 74831615 74831719 -178424864 - MLT1L LTR MaLR 0 615 501 1117 183 23 27 chr2 74831759 74831978 -178424605 + MER20 DNA MER1_type 2 219 0 255 230 10 60 chr2 74832010 74832110 -178424473 - MLT1L LTR MaLR -505 110 16 693 235 35 24 chr2 74832158 74832328 -178424255 - MER91B DNA MER1_type 0 190 19 817 325 52 30 chr2 74832355 74832755 -178423828 + L3 LINE CR1 931 1339 -238 240 235 103 0 chr2 74832753 74832821 -178423762 - MIR3 SINE MIR -1 207 133 * 192 200 0 0 chr2 74833046 74833081 -178423502 + L3 LINE CR1 1455 1489 -88 * 218 242 32 16 chr2 74833080 74833142 -178423441 + MIR3 SINE MIR 121 183 -25 667 268 16 6 chr2 74833259 74833442 -178423141 - L1ME LINE L1 -338 5783 5599 467 315 101 65 chr2 74833592 74834765 -178421818 - L1ME LINE L1 -804 5342 4213 564 55 27 0 chr2 74834765 74834838 -178421745 - Alu SINE Alu -15 294 220 467 315 101 65 chr2 74834838 74835483 -178421100 - L1ME LINE L1 -1933 4213 3303 2034 145 84 29 chr2 74835483 74835828 -178420755 + THE1B LTR MaLR 1 364 0 467 315 101 65 chr2 74835828 74835928 -178420655 - L1ME LINE L1 -2843 3303 3208 308 350 40 10 chr2 74835929 74836029 -178420554 + L2 LINE L2 3159 3261 -11 372 308 71 29 chr2 74836050 74836290 -178420293 - L1ME LINE L1 -2971 3175 2926 352 286 126 36 chr2 74836488 74836714 -178419869 - L2 LINE L2 -908 2406 2135 901 177 79 0 chr2 74836714 74836878 -178419705 + MER45A DNA AcHobo 2 178 0 352 286 126 36 chr2 74836878 74837008 -178419575 - L2 LINE L2 -1179 2135 2018 865 244 171 16 chr2 74837177 74837624 -178418959 + L2 LINE L2 2537 3055 -217 2188 117 0 19 chr2 74838469 74838776 -178417807 - AluSx SINE Alu -11 301 1 262 268 28 0 chr2 74840438 74840547 -178416036 - MIR3 SINE MIR -3 205 92 202 276 58 35 chr2 74841275 74841362 -178415221 - MIR SINE MIR -114 148 60 279 243 40 0 chr2 74841576 74841650 -178414933 - L2 LINE L2 -1 3312 3236 303 272 68 10 chr2 74843275 74843378 -178413205 - L2 LINE L2 -173 3099 2991 252 360 35 12 chr2 74843680 74843852 -178412731 + L3b LINE CR1 1288 1463 -120 623 251 54 71 chr2 74843965 74844231 -178412352 - MIR SINE MIR 0 262 4 534 272 74 107 chr2 74846580 74847065 -178409518 - L2 LINE L2 0 3272 2804 232 257 54 14 chr2 74847403 74847477 -178409106 - MIR3 SINE MIR -50 158 82 3791 163 59 9 chr2 74847600 74848261 -178408322 + L1MC1 LINE L1 3 696 -5730 790 152 1 3 chr2 74848261 74848391 -178408192 + MLT1A1 LTR MaLR 252 365 0 3008 208 45 3 chr2 74848391 74849441 -178407142 + L1MC1 LINE L1 2189 3287 -3139 9931 190 18 14 chr2 74849464 74852876 -178403707 - L1PA16 LINE L1 -1 6165 2769 1531 104 5 0 chr2 74852876 74853088 -178403495 - AluSp SINE Alu -18 295 83 3800 189 19 6 chr2 74853089 74855396 -178401187 + L1MC1 LINE L1 4194 6613 0 332 275 70 0 chr2 74855476 74855597 -178400986 - MIR SINE MIR -64 144 45 186 243 103 65 chr2 74856387 74856494 -178400089 - L3 LINE CR1 -87 1490 1380 370 178 189 95 chr2 74856954 74857115 -178399468 - MLT1I LTR MaLR -5 404 228 803 221 77 5 chr2 74857115 74857310 -178399273 + MER3 DNA MER1_type 1 209 0 308 158 35 0 chr2 74857404 74857461 -178399122 - MLT1J2 LTR MaLR -324 126 68 802 248 93 24 chr2 74859159 74859553 -178397030 + MLT1G LTR MaLR 1 573 -17 193 350 161 7 chr2 74859630 74859773 -178396810 + L2 LINE L2 3106 3270 -2 263 285 164 34 chr2 74860031 74860238 -178396345 + L2 LINE L2 2808 3041 -231 14745 118 71 11 chr2 74860303 74861553 -178395030 + Tigger1 DNA MER2_type 5 1178 -1240 1769 69 0 0 chr2 74861553 74861784 -178394799 - AluY SINE Alu 0 311 81 14745 118 71 11 chr2 74861784 74862810 -178393773 + Tigger1 DNA MER2_type 1178 2418 0 277 204 65 86 chr2 74862841 74862934 -178393649 + L2 LINE L2 3182 3272 0 295 285 108 27 chr2 74863562 74863748 -178392835 - MIR3 SINE MIR -5 203 3 550 297 128 40 chr2 74864776 74865308 -178391275 - L2 LINE L2 -340 2974 2396 456 19 0 0 chr2 74865907 74865960 -178390623 + (CA)n Simple_repeat Simple_repeat 1 53 0 790 164 58 69 chr2 74866166 74866355 -178390228 + MER5A DNA MER1_type 1 187 -2 413 312 5 27 chr2 74867366 74867570 -178389013 + MIR SINE MIR 42 237 -25 343 208 129 50 chr2 74867600 74867701 -178388882 + L2 LINE L2 3163 3271 -1 216 262 49 0 chr2 74868359 74868420 -178388163 + MIR3 SINE MIR 99 162 -46 231 325 83 8 chr2 74868952 74869072 -178387511 - MER91A DNA MER1_type -46 150 22 219 280 0 0 chr2 74869119 74869169 -178387414 + C-rich Low_complexity Low_complexity 2 51 0 429 296 126 0 chr2 74869562 74869697 -178386886 - MER91A DNA MER1_type -2 194 43 365 368 22 16 chr2 74870338 74870523 -178386060 - MIR SINE MIR -56 206 21 379 316 101 32 chr2 74870871 74871187 -178385396 + L1ME LINE L1 5297 5634 -536 22 70 0 0 chr2 74871366 74871409 -178385174 + AT_rich Low_complexity Low_complexity 1 43 0 2313 77 0 0 chr2 74871529 74871827 -178384756 - AluSg SINE Alu -1 309 12 1129 198 98 49 chr2 74873420 74873788 -178382795 + MER58D DNA MER1_type 1 386 0 668 267 81 6 chr2 74873878 74874050 -178382533 + MIR SINE MIR 48 232 -30 1159 241 124 35 chr2 74874561 74875101 -178381482 + L1ME4a LINE L1 5265 5852 -269 267 288 167 15 chr2 74876492 74876624 -178379959 - L2 LINE L2 -3 3310 3159 433 302 146 8 chr2 74877011 74877449 -178379134 - L2 LINE L2 -267 3046 2538 1115 171 41 111 chr2 74877649 74878018 -178378565 + Charlie4a DNA MER1_type 4 346 -162 1654 165 16 25 chr2 74878450 74878765 -178377818 - AluJb SINE Alu 0 312 1 294 348 14 22 chr2 74880383 74880521 -178376062 + MIR SINE MIR 12 148 -114 234 157 206 39 chr2 74881037 74881139 -178375444 + MIR3 SINE MIR 38 156 -52 244 200 88 25 chr2 74881185 74881265 -178375318 + MIR3 SINE MIR 8 92 -116 894 233 122 100 chr2 74881341 74882400 -178374183 + L2 LINE L2 2245 3313 0 489 227 147 31 chr2 74882378 74882564 -178374019 + MIR SINE MIR 1 203 -59 * 328 119 179 15 chr2 74883642 74883709 -178372874 - MADE1 DNA Mariner -2 78 1 641 325 42 17 chr2 74884700 74884937 -178371646 - MIR SINE MIR -7 255 13 435 202 186 8 chr2 74886018 74886142 -178370441 - MIR SINE MIR -16 246 101 214 146 200 18 chr2 74886855 74886910 -178369673 - MIR3 SINE MIR -42 166 102 669 242 114 19 chr2 74887059 74887270 -178369313 - MER20B DNA MER1_type 0 783 553 362 244 134 61 chr2 74887459 74887623 -178368960 - MER20B DNA MER1_type -510 273 98 355 279 51 51 chr2 74887813 74888010 -178368573 + MLT1L LTR MaLR 393 589 -26 250 271 93 37 chr2 74889385 74889492 -178367091 + L2 LINE L2 3144 3256 -16 262 274 60 8 chr2 74889718 74889835 -178366748 + (CAGAGA)n Simple_repeat Simple_repeat 4 126 0 264 100 0 0 chr2 74890161 74890201 -178366382 + (CA)n Simple_repeat Simple_repeat 2 41 0 641 256 104 15 chr2 74891659 74891929 -178364654 - HAL1 LINE L1 -27 2480 2187 607 272 17 0 chr2 74891941 74892121 -178364462 - HAL1 LINE L1 -381 2126 1944 979 248 45 7 chr2 74892156 74892446 -178364137 - HAL1 LINE L1 -625 1882 1582 270 266 73 37 chr2 74892616 74892725 -178363858 - MER5B DNA MER1_type -6 172 60 201 74 0 0 chr2 74892747 74892774 -178363809 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4767 191 16 34 chr2 74892814 74894517 -178362066 - L1MB3 LINE L1 -1 6182 4515 210 320 0 0 chr2 74894868 74894971 -178361612 + A-rich Low_complexity Low_complexity 1 103 0 875 300 98 28 chr2 74895111 74895825 -178360758 + L1M4 LINE L1 2163 2926 -3220 419 238 134 17 chr2 74895837 74896009 -178360574 + L1MEc LINE L1 246 437 -6170 * 3009 243 66 35 chr2 74896003 74896196 -178360387 + L1MEc LINE L1 1536 1722 -4704 1659 190 7 3 chr2 74896196 74896506 -178360077 + AluJo SINE Alu 1 311 -1 3009 243 66 35 chr2 74896506 74896519 -178360064 + L1MEc LINE L1 1722 1733 -4693 2243 81 13 7 chr2 74896519 74896828 -178359755 + AluY SINE Alu 1 311 0 3009 243 66 35 chr2 74896828 74897772 -178358811 + L1MEc LINE L1 1733 2909 -3517 1863 164 3 0 chr2 74897772 74898077 -178358506 + AluJo SINE Alu 1 306 -6 3009 243 66 35 chr2 74898077 74898682 -178357901 + L1MEc LINE L1 2909 3494 -2932 325 227 98 80 chr2 74898788 74898951 -178357632 + L1MEc LINE L1 3944 4109 -2317 760 212 46 83 chr2 74898958 74899216 -178357367 + MLT1D LTR MaLR 16 271 -196 756 263 161 75 chr2 74899219 74899373 -178357210 - HAL1 LINE L1 -2041 466 327 2138 118 203 100 chr2 74899373 74899975 -178356608 + MER4A LTR ERV1 1 664 0 756 263 161 75 chr2 74899975 74900235 -178356348 - HAL1 LINE L1 -2180 327 16 260 300 120 40 chr2 74900249 74900399 -178356184 - HAL1 LINE L1 -2337 170 9 * 704 279 105 60 chr2 74900391 74900780 -178355803 - L1ME LINE L1 -444 5677 5267 603 342 60 52 chr2 74900953 74901450 -178355133 - L1ME LINE L1 -1148 4998 4498 290 211 53 0 chr2 74901454 74901530 -178355053 + MER116 DNA Mariner 1 80 0 821 231 45 43 chr2 74901791 74902144 -178354439 + MLT1G LTR MaLR 140 588 -2 1941 256 51 27 chr2 74902290 74903115 -178353468 - L1ME3 LINE L1 -77 6280 5476 4388 129 9 16 chr2 74903115 74903454 -178353129 - L1PA14 LINE L1 -1 6160 5820 2374 75 0 0 chr2 74903454 74903759 -178352824 - AluY SINE Alu -6 305 1 4388 129 9 16 chr2 74903759 74904108 -178352475 - L1PA14 LINE L1 -341 5820 5477 3495 54 2 2 chr2 74904109 74904552 -178352031 - L1PA5 LINE L1 -4 6150 5708 16295 187 19 6 chr2 74904552 74907899 -178348684 - L1PA14 LINE L1 -716 5452 2064 267 250 74 46 chr2 74908013 74908223 -178348360 - L1ME3 LINE L1 -1109 5273 5048 441 285 74 55 chr2 74908237 74908478 -178348105 - L1ME3 LINE L1 -3893 2491 2295 412 242 0 50 chr2 74908618 74908717 -178347866 - MER5A DNA MER1_type -85 104 11 285 282 48 94 chr2 74908829 74908891 -178347692 - L1PA14 LINE L1 -841 1666 1603 1762 156 0 29 chr2 74908891 74909198 -178347385 - AluJb SINE Alu -14 298 1 285 282 48 94 chr2 74909198 74909595 -178346988 - L1PA14 LINE L1 -904 1603 1245 1814 169 68 11 chr2 74909595 74909949 -178346634 - THE1C LTR MaLR 0 375 2 285 282 48 94 chr2 74909949 74910078 -178346505 - L1PA14 LINE L1 -1262 1245 1112 1814 139 24 3 chr2 74910132 74910426 -178346157 - AluJo SINE Alu -12 300 1 4310 131 29 24 chr2 74910520 74911237 -178345346 + MER72 LTR ERV1 1 721 -1 252 304 97 31 chr2 74911754 74911981 -178344602 - L1M4 LINE L1 -2316 3830 3589 330 308 103 26 chr2 74912076 74912232 -178344351 - L1M4 LINE L1 -2637 3509 3342 43950 32 22 1 chr2 74912248 74918270 -178338313 + L1PA2 LINE L1 1 6155 0 25 0 0 0 chr2 74918270 74918295 -178338288 + AT_rich Low_complexity Low_complexity 1 25 0 1386 228 63 35 chr2 74918297 74918722 -178337861 - L1ME1 LINE L1 -5 6161 5725 1863 211 58 35 chr2 74918729 74919208 -178337375 + MLT1D LTR MaLR 3 492 -13 2823 196 123 53 chr2 74919210 74919387 -178337196 - L1ME1 LINE L1 -455 5711 5548 1451 180 31 90 chr2 74919387 74919692 -178336891 - MLT1A1 LTR MaLR 0 365 86 1797 145 17 7 chr2 74919692 74919982 -178336601 - AluSx SINE Alu -19 293 1 1451 180 31 90 chr2 74919982 74920064 -178336519 - MLT1A1 LTR MaLR -279 86 1 2823 196 123 53 chr2 74920064 74921141 -178335442 - L1ME1 LINE L1 -618 5548 4345 4585 49 41 24 chr2 74921335 74922361 -178334222 - MER11A LTR ERVK 0 1266 1 709 272 79 33 chr2 74922475 74922780 -178333803 + MLT2F LTR ERVL 1 319 -344 294 269 11 21 chr2 74922815 74922908 -178333675 + MLT2F LTR ERVL 421 512 -151 379 294 130 14 chr2 74923065 74923211 -178333372 - HAL1b LINE L1 -649 699 537 488 267 74 89 chr2 74923766 74924103 -178332480 + MLT1J1 LTR MaLR 1 332 -114 195 282 218 0 chr2 74924590 74924700 -178331883 + MIR SINE MIR 20 153 -109 1225 286 116 70 chr2 74924711 74924778 -178331805 + HAL1 LINE L1 3 65 -2442 2184 102 3 0 chr2 74924778 74925072 -178331511 - AluSp SINE Alu -18 295 1 1225 286 116 70 chr2 74925072 74925283 -178331300 + HAL1 LINE L1 65 265 -2242 2077 118 10 0 chr2 74925283 74925589 -178330994 + AluSx SINE Alu 1 309 -3 1225 286 116 70 chr2 74925589 74926135 -178330448 + HAL1 LINE L1 265 866 -1641 929 244 168 18 chr2 74926188 74926683 -178329900 + HAL1 LINE L1 1939 2507 0 461 264 52 52 chr2 74926925 74927099 -178329484 - MIR SINE MIR -65 197 24 285 273 88 54 chr2 74927628 74927833 -178328750 + MLT1H1 LTR MaLR 8 219 -336 191 293 75 28 chr2 74928125 74928231 -178328352 - MIR SINE MIR -78 130 20 234 191 0 0 chr2 74928281 74928328 -178328255 + GA-rich Low_complexity Low_complexity 3 49 0 414 0 0 0 chr2 74928424 74928470 -178328113 + (TG)n Simple_repeat Simple_repeat 1 46 0 2986 213 178 9 chr2 74928601 74929669 -178326914 + MER52A LTR ERV1 1 1278 0 1831 139 14 0 chr2 74931505 74931786 -178324797 + AluSx SINE Alu 1 285 -27 480 239 91 76 chr2 74933107 74933304 -178323279 - MIR SINE MIR -60 202 3 312 302 60 34 chr2 74934700 74934849 -178321734 - MLT1L LTR MaLR -207 408 256 3105 99 126 144 chr2 74934974 74936292 -178320291 + pTR5 LTR ERV1 738 2468 0 252 377 121 0 chr2 74936298 74936497 -178320086 + L2 LINE L2 2640 2862 -452 632 169 4 48 chr2 74936696 74936728 -178319855 + GA-rich Low_complexity Low_complexity 1 33 -846 216 0 0 0 chr2 74936728 74936752 -178319831 + (CAGG)n Simple_repeat Simple_repeat 2 25 0 4219 120 18 2 chr2 74936754 74937378 -178319205 + MER41B LTR ERV1 2 635 0 632 169 4 48 chr2 74937378 74937616 -178318967 + GA-rich Low_complexity Low_complexity 34 879 0 1919 236 91 40 chr2 74937741 74938419 -178318164 + MER50 LTR ERV1 22 734 0 250 221 179 43 chr2 74938728 74938868 -178317715 - L3 LINE CR1 -884 693 535 23 78 0 0 chr2 74941081 74941132 -178315451 + AT_rich Low_complexity Low_complexity 1 51 0 2001 122 0 3 chr2 74941236 74941530 -178315053 + AluSx SINE Alu 1 293 -19 294 305 231 31 chr2 74941754 74942588 -178313995 + L2 LINE L2 1739 2739 -575 349 140 0 0 chr2 74942601 74942658 -178313925 + Alu SINE Alu 246 302 0 884 160 165 36 chr2 74943186 74943306 -178313277 - MER20 DNA MER1_type 0 219 116 339 44 0 0 chr2 74943306 74943351 -178313232 + (CA)n Simple_repeat Simple_repeat 1 45 0 884 160 165 36 chr2 74943351 74943424 -178313159 - MER20 DNA MER1_type -103 116 1 300 264 159 46 chr2 74943563 74943802 -178312781 + MLT1K LTR MaLR 323 588 0 22 0 0 0 chr2 74944414 74944436 -178312147 + AT_rich Low_complexity Low_complexity 1 22 0 965 260 85 60 chr2 74944440 74945086 -178311497 - HAL1b LINE L1 -620 728 67 1640 164 41 14 chr2 74945530 74945823 -178310760 - AluJb SINE Alu -11 301 1 3327 229 45 14 chr2 74946074 74947216 -178309367 - L1ME1 LINE L1 -7 6159 4982 580 125 0 0 chr2 74947230 74947310 -178309273 + AluJ/FLAM SINE Alu 12 91 -221 1000 258 112 0 chr2 74947310 74947597 -178308986 - L2 LINE L2 -881 2433 2115 23 0 0 0 chr2 74947728 74947751 -178308832 + AT_rich Low_complexity Low_complexity 1 23 0 2707 206 234 24 chr2 74947751 74948700 -178307883 + L1MC4 LINE L1 6771 7918 -124 372 233 8 18 chr2 74948701 74948822 -178307761 + L1MC4 LINE L1 1995 6984 -1338 330 188 0 75 chr2 74948809 74948889 -178307694 + L1MCa LINE L1 1995 2068 -4358 * 302 289 22 22 chr2 74948904 74949039 -178307544 + L1MC4 LINE L1 7902 8036 -6 881 311 58 35 chr2 74949196 74950043 -178306540 - L1ME1 LINE L1 -1303 4843 3978 358 309 186 10 chr2 74950111 74950315 -178306268 - MIR SINE MIR -13 249 10 1256 320 134 45 chr2 74950318 74951447 -178305136 - L1ME1 LINE L1 -2247 3899 2671 605 189 121 78 chr2 74952312 74952518 -178304065 - MLT1A1 LTR MaLR -150 215 1 2243 113 0 0 chr2 74952593 74952904 -178303679 - AluSx SINE Alu -1 311 1 253 73 0 55 chr2 74953791 74953846 -178302737 + (TTTTTG)n Simple_repeat Simple_repeat 2 53 0 998 130 28 23 chr2 74953881 74954058 -178302525 - MER5B DNA MER1_type 0 178 1 401 274 233 0 chr2 74954058 74954204 -178302379 - MER5A DNA MER1_type -6 183 4 1512 164 29 62 chr2 74954241 74954482 -178302101 - L1MC1 LINE L1 0 6333 6110 1020 198 111 9 chr2 74954482 74954699 -178301884 + MER8 DNA MER2_type 1 239 0 1512 164 29 62 chr2 74954699 74954877 -178301706 - L1MC1 LINE L1 -223 6110 5928 845 174 77 15 chr2 74954936 74955132 -178301451 - MER20 DNA MER1_type -11 208 1 519 299 137 36 chr2 74955186 74955544 -178301039 - L2 LINE L2 -1 3312 2919 498 313 91 80 chr2 74955668 74956245 -178300338 - L1ME1 LINE L1 -1458 4688 2201 22 0 0 0 chr2 74956276 74956298 -178300285 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr2 74956338 74956361 -178300222 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 583 304 79 9 chr2 74956517 74956859 -178299724 - HAL1b LINE L1 -646 702 337 23 33 0 0 chr2 74956967 74956997 -178299586 + AT_rich Low_complexity Low_complexity 1 30 0 208 191 43 0 chr2 74957046 74957093 -178299490 + (TGAA)n Simple_repeat Simple_repeat 1 49 0 1880 196 26 81 chr2 74957470 74958036 -178298547 + MLT1F LTR MaLR 7 541 -1 633 263 139 22 chr2 74958636 74958959 -178297624 + L1ME3A LINE L1 5568 5928 -242 494 194 92 0 chr2 74958966 74959064 -178297519 + FLAM_C SINE Alu 27 133 -10 7974 79 6 22 chr2 74959601 74960690 -178295893 + MER11C LTR ERVK 1 1071 0 379 376 20 10 chr2 74960867 74961064 -178295519 + MIR3 SINE MIR 10 208 0 414 165 47 0 chr2 74964883 74964968 -178291615 + MIR SINE MIR 62 150 -112 1877 156 3 10 chr2 74965043 74965345 -178291238 + AluJb SINE Alu 13 312 0 2234 152 24 0 chr2 74965345 74965727 -178290856 - MSTB LTR MaLR -34 392 2 337 313 95 7 chr2 74967122 74967269 -178289314 - MIR3 SINE MIR -17 191 32 1756 178 0 0 chr2 74968384 74968690 -178287893 + AluJo SINE Alu 1 306 0 836 195 26 45 chr2 74968826 74969017 -178287566 - L1 LINE L1 -805 5341 5155 906 85 77 8 chr2 74969017 74969147 -178287436 - MER85 DNA T2_type 0 139 1 836 195 26 45 chr2 74969147 74969222 -178287361 - L1 LINE L1 -991 5155 5080 800 203 31 0 chr2 74969433 74969596 -178286987 - L1MC1 LINE L1 0 6333 6166 560 286 5 9 chr2 74969878 74970098 -178286485 + L1M4 LINE L1 4549 4767 -1379 * 3277 219 61 26 chr2 74970095 74971581 -178285002 + L1MD2 LINE L1 483 2021 -4385 257 143 0 0 chr2 74971576 74971625 -178284958 + L1MC2 LINE L1 6296 6344 0 * 3741 208 31 102 chr2 74971616 74971970 -178284613 + L1MD2 LINE L1 4614 4992 -1627 569 197 111 0 chr2 74971970 74972087 -178284496 + FLAM_A SINE Alu 1 130 -3 3741 208 31 102 chr2 74972087 74972532 -178284051 + L1MD2 LINE L1 4992 5467 -1152 873 153 0 7 chr2 74972532 74972676 -178283907 + FLAM_C SINE Alu 1 143 0 3741 208 31 102 chr2 74972676 74973422 -178283161 + L1MD2 LINE L1 5467 6130 -489 1573 104 9 5 chr2 74973422 74973642 -178282941 - AluSq SINE Alu -14 299 79 3741 208 31 102 chr2 74973642 74973876 -178282707 + L1MD2 LINE L1 6130 6379 -240 1039 181 23 135 chr2 74973898 74974293 -178282290 - MER7A DNA MER2_type 0 346 1 378 195 81 11 chr2 74974297 74974425 -178282158 + L1MD3 LINE L1 7661 7984 -3 359 56 19 0 chr2 74974425 74974479 -178282104 + (CA)n Simple_repeat Simple_repeat 2 56 0 380 144 222 0 chr2 74974814 74974904 -178281679 + MLT1K LTR MaLR 140 249 -339 365 323 16 0 chr2 74975462 74975586 -178280997 + CT-rich Low_complexity Low_complexity 2 127 0 185 270 52 61 chr2 74975785 74975900 -178280683 + L2 LINE L2 3072 3185 -87 374 190 38 0 chr2 74976952 74977031 -178279552 - MER103 DNA DNA -82 84 3 316 336 52 52 chr2 74977588 74977874 -178278709 + L1M4 LINE L1 4218 4503 -1643 182 321 31 74 chr2 74979417 74979579 -178277004 + L3b LINE CR1 1248 1402 -181 188 279 0 0 chr2 74981146 74981189 -178275394 + L2 LINE L2 3143 3185 -87 245 244 12 58 chr2 74982208 74982294 -178274289 - MIR3 SINE MIR -30 178 97 391 314 0 36 chr2 74985522 74985659 -178270924 + MIR3 SINE MIR 35 166 -42 276 254 0 28 chr2 74990749 74990820 -178265763 + MIR SINE MIR 86 154 -108 422 251 120 33 chr2 74991849 74992257 -178264326 - MER115 DNA AcHobo -161 532 58 203 30 0 61 chr2 74992789 74992822 -178263761 + (CCCCCA)n Simple_repeat Simple_repeat 3 33 0 21 0 0 0 chr2 74993205 74993226 -178263357 + GC_rich Low_complexity Low_complexity 1 21 0 204 261 0 54 chr2 74993836 74993928 -178262655 + CT-rich Low_complexity Low_complexity 4 90 0 217 98 0 78 chr2 74996147 74996198 -178260385 + (GGGGA)n Simple_repeat Simple_repeat 1 47 0 234 0 0 0 chr2 74996348 74996374 -178260209 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 348 24 0 0 chr2 74996791 74996911 -178259672 + (CGG)n Simple_repeat Simple_repeat 1 161 0 348 24 0 0 chr2 74996911 74996952 -178259631 + (CGG)n Simple_repeat Simple_repeat 2 42 0 211 71 54 36 chr2 74997338 74997394 -178259189 + (CCCG)n Simple_repeat Simple_repeat 1 57 0 292 152 30 0 chr2 74997501 74997567 -178259016 + (CA)n Simple_repeat Simple_repeat 2 69 0 414 0 0 0 chr2 75000277 75000323 -178256260 + (CA)n Simple_repeat Simple_repeat 1 46 0 474 18 0 0 chr2 75000911 75000966 -178255617 + (CA)n Simple_repeat Simple_repeat 1 55 0 330 45 0 0 chr2 75003023 75003067 -178253516 + (TG)n Simple_repeat Simple_repeat 1 44 0 383 268 72 36 chr2 75004677 75004815 -178251768 + MIR SINE MIR 2 144 -118 299 325 0 0 chr2 75004796 75004879 -178251704 - L2 LINE L2 -629 2685 2603 * 645 270 26 78 chr2 75004909 75005179 -178251404 - MIR SINE MIR 0 262 7 522 340 42 27 chr2 75005190 75005596 -178250987 - L2 LINE L2 -733 2581 2170 2140 122 7 0 chr2 75005734 75006028 -178250555 - AluSx SINE Alu -16 296 1 535 250 36 73 chr2 75007087 75007279 -178249304 + MIR SINE MIR 49 233 -29 388 264 0 22 chr2 75007285 75007376 -178249207 + MER69A DNA AcHobo 7 95 -82 320 291 78 10 chr2 75008350 75008453 -178248130 - MIR SINE MIR -73 135 26 323 261 78 35 chr2 75009172 75009314 -178247269 - L1ME1 LINE L1 -225 5941 5794 190 357 47 31 chr2 75009592 75009721 -178246862 + L2 LINE L2 2919 3049 -223 206 241 127 0 chr2 75010417 75010496 -178246087 + L2 LINE L2 2341 2429 -885 1979 147 3 22 chr2 75010946 75011258 -178245325 + AluJb SINE Alu 1 306 -6 430 310 120 20 chr2 75011261 75011703 -178244880 + L1ME LINE L1 3684 4169 -1977 379 300 154 37 chr2 75011935 75012482 -178244101 + L1ME LINE L1 4231 4841 -1305 30 45 0 0 chr2 75012600 75012644 -178243939 + AT_rich Low_complexity Low_complexity 1 44 0 2441 194 49 49 chr2 75012794 75012982 -178243601 + L1MC3 LINE L1 6369 6556 -1229 360 43 0 0 chr2 75012982 75013028 -178243555 + (GA)n Simple_repeat Simple_repeat 2 47 0 2441 194 49 49 chr2 75013028 75013467 -178243116 + L1MC3 LINE L1 6555 6996 -789 4429 175 49 41 chr2 75013476 75014853 -178241730 + L1MB7 LINE L1 4783 6168 -16 367 132 9 105 chr2 75014881 75014995 -178241588 + L1MC3 LINE L1 6992 7094 -691 365 165 0 129 chr2 75015012 75015097 -178241486 + MLT1L LTR MaLR 52 125 -442 2811 166 55 9 chr2 75015097 75015662 -178240921 + L1MD3 LINE L1 7404 7994 -1 338 247 12 0 chr2 75015896 75015977 -178240606 - L2 LINE L2 -5 3308 3227 405 291 0 0 chr2 75016002 75016125 -178240458 + MLT1L LTR MaLR 128 186 -325 21 0 0 0 chr2 75016130 75016151 -178240432 + AT_rich Low_complexity Low_complexity 1 21 0 820 183 0 0 chr2 75016152 75016283 -178240300 + FRAM SINE Alu 36 166 -10 454 308 15 8 chr2 75016398 75016531 -178240052 + MLT1J LTR MaLR 233 366 -145 451 283 236 8 chr2 75016705 75017110 -178239473 + L1ME LINE L1 5329 5819 -302 676 261 75 0 chr2 75017378 75017577 -178239006 - L1ME3 LINE L1 -307 5855 5642 1105 231 134 0 chr2 75017597 75017895 -178238688 - MER46C DNA MER2_type 0 338 1 367 325 56 0 chr2 75017900 75018026 -178238557 - L1ME3 LINE L1 -2228 5580 5448 664 294 138 43 chr2 75018082 75018790 -178237793 + L1ME4a LINE L1 4378 5163 -983 1962 152 0 13 chr2 75018791 75019106 -178237477 + AluJb SINE Alu 1 311 -1 267 203 14 29 chr2 75019259 75019328 -178237255 + MLT1L LTR MaLR 131 198 -417 257 304 137 13 chr2 75019465 75019713 -178236870 + MLT1K LTR MaLR 328 586 -2 689 276 71 74 chr2 75019776 75020135 -178236448 + L1ME4a LINE L1 5254 5617 -504 2144 116 0 0 chr2 75020135 75020443 -178236140 - AluSx SINE Alu 0 308 1 689 276 71 74 chr2 75020443 75020750 -178235833 + L1ME4a LINE L1 5617 5924 -197 556 237 8 15 chr2 75021040 75021171 -178235412 + MER97b DNA MER1_type? 55 184 -869 207 139 0 0 chr2 75022906 75022942 -178233641 + (CA)n Simple_repeat Simple_repeat 1 36 0 366 307 52 31 chr2 75023281 75023473 -178233110 - MIR SINE MIR -39 223 28 182 280 93 59 chr2 75023897 75024015 -178232568 + L2 LINE L2 3145 3266 -6 210 71 0 0 chr2 75024546 75024574 -178232009 + (GAA)n Simple_repeat Simple_repeat 2 29 0 2396 87 0 0 chr2 75029199 75029497 -178227086 + AluY SINE Alu 1 298 -13 25 0 0 0 chr2 75032560 75032585 -178223998 + AT_rich Low_complexity Low_complexity 1 25 0 223 273 60 15 chr2 75032900 75032976 -178223607 + MIR SINE MIR 28 106 -102 5102 31 5 7 chr2 75034014 75034594 -178221989 - L1PA5 LINE L1 0 6154 5576 5092 183 161 23 chr2 75035122 75036538 -178220045 - MER52A LTR ERV1 -1 1754 1 1511 236 90 87 chr2 75037044 75037781 -178218802 - L1MC4 LINE L1 -1 8041 7303 560 254 6 29 chr2 75037811 75037984 -178218599 - L1MC4 LINE L1 -820 7222 7054 400 182 0 36 chr2 75038011 75038121 -178218462 + CT-rich Low_complexity Low_complexity 4 109 0 933 79 101 0 chr2 75038123 75038262 -178218321 - AluY SINE Alu -1 310 158 183 156 0 0 chr2 75038267 75038299 -178218284 + CT-rich Low_complexity Low_complexity 1 32 0 1499 158 22 33 chr2 75038299 75038572 -178218011 - AluJo SINE Alu -11 301 32 1514 242 50 29 chr2 75038573 75039052 -178217531 - L1MC4a LINE L1 -1501 6307 5819 190 0 67 0 chr2 75039764 75039794 -178216789 + (TTG)n Simple_repeat Simple_repeat 2 33 0 210 289 134 21 chr2 75040403 75040500 -178216083 + L2 LINE L2 3143 3250 -22 231 320 113 54 chr2 75041750 75041953 -178214630 - L2 LINE L2 -9 3263 3049 941 208 23 6 chr2 75042161 75042334 -178214249 + MER58A DNA MER1_type 41 216 -8 261 0 0 0 chr2 75042841 75042870 -178213713 + (TC)n Simple_repeat Simple_repeat 2 30 0 189 107 0 0 chr2 75042869 75042897 -178213686 + (TG)n Simple_repeat Simple_repeat 1 28 0 * 1460 211 48 46 chr2 75043783 75044196 -178212387 + Charlie7 DNA MER1_type 278 691 -1921 248 200 9 114 chr2 75044308 75044413 -178212170 + Charlie7 DNA MER1_type 2519 2612 0 560 289 66 48 chr2 75045393 75045621 -178210962 - MIR SINE MIR -11 251 20 262 220 17 161 chr2 75046032 75046150 -178210433 - MER102b DNA MER1_type -9 332 232 224 182 52 26 chr2 75046801 75046878 -178209705 + (TAAG)n Simple_repeat Simple_repeat 4 82 0 2371 98 0 0 chr2 75048163 75048468 -178208115 - AluSq SINE Alu -8 305 1 183 132 105 0 chr2 75048581 75048619 -178207964 + MIR3 SINE MIR 153 194 -14 702 176 88 24 chr2 75048651 75048776 -178207807 - AluJo SINE Alu -178 134 2 224 323 133 13 chr2 75048830 75048988 -178207595 - MIR3 SINE MIR -13 195 19 27 0 0 0 chr2 75049091 75049118 -178207465 + AT_rich Low_complexity Low_complexity 1 27 0 357 238 52 115 chr2 75049227 75049597 -178206986 - L1ME2 LINE L1 -237 5927 5728 185 105 105 0 chr2 75051263 75051301 -178205282 + MIR SINE MIR 73 114 -148 203 271 104 0 chr2 75051327 75051375 -178205208 + MIR SINE MIR 202 254 -8 241 286 56 48 chr2 75053466 75053592 -178202991 + L3 LINE CR1 1412 1538 -39 485 322 53 14 chr2 75054330 75054538 -178202045 - MIR SINE MIR -11 251 36 185 255 0 0 chr2 75054995 75055046 -178201537 + L3 LINE CR1 1368 1418 -159 359 295 33 50 chr2 75055287 75055583 -178201000 - L1MC4a LINE L1 -335 5786 5646 639 300 123 4 chr2 75055591 75055818 -178200765 + MIR SINE MIR 1 254 -8 329 229 202 0 chr2 75055853 75055962 -178200621 - L1MC4a LINE L1 -471 5650 5520 3909 109 7 0 chr2 75056359 75056917 -178199666 - L1PA16 LINE L1 -9 6157 5596 2462 87 3 0 chr2 75057214 75057549 -178199034 + AluSp SINE Alu 2 337 0 668 171 0 0 chr2 75057680 75057791 -178198792 + AluJb SINE Alu 178 288 -24 206 366 53 38 chr2 75058439 75058570 -178198013 - L2 LINE L2 -3 3269 3137 224 227 27 93 chr2 75058715 75058790 -178197793 + L2 LINE L2 3227 3296 -17 285 255 106 21 chr2 75059481 75059575 -178197008 + MIR3 SINE MIR 86 187 -21 224 313 24 24 chr2 75060995 75061078 -178195505 + L3b LINE CR1 1294 1376 -207 1115 258 74 67 chr2 75061126 75061670 -178194913 + MLT1H1 LTR MaLR 1 551 -4 1890 173 55 0 chr2 75061888 75062234 -178194349 + MLT1A1 LTR MaLR 1 365 0 2381 63 10 13 chr2 75062477 75062776 -178193807 + AluY SINE Alu 1 298 -13 557 312 114 22 chr2 75063802 75064215 -178192368 + L1MCc LINE L1 149 599 -5824 5027 70 4 0 chr2 75064506 75065196 -178191387 + L1PA8A LINE L1 5323 6015 -116 835 72 80 32 chr2 75065197 75065322 -178191261 + AluSg/x SINE Alu 168 298 -14 191 315 99 45 chr2 75065744 75065855 -178190728 - L2 LINE L2 -17 3255 3139 490 281 13 20 chr2 75066168 75066321 -178190262 - MIR SINE MIR -26 236 85 235 239 0 0 chr2 75066693 75066739 -178189844 + (TATG)n Simple_repeat Simple_repeat 2 47 0 2062 108 52 0 chr2 75066933 75067219 -178189364 - AluSc SINE Alu -8 301 1 238 279 0 0 chr2 75067403 75067464 -178189119 + L3b LINE CR1 1197 1257 -326 199 208 103 71 chr2 75068053 75068192 -178188391 - MIR3 SINE MIR -41 167 79 325 279 71 43 chr2 75068228 75068368 -178188215 + MIR SINE MIR 73 216 -46 1312 203 17 0 chr2 75069108 75069409 -178187174 - L1MA4 LINE L1 -3 6297 5992 792 251 65 74 chr2 75069629 75069996 -178186587 + L2 LINE L2 2950 3313 0 284 0 28 0 chr2 75071952 75071988 -178184595 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 375 398 56 3 chr2 75072420 75072777 -178183806 + L1ME LINE L1 5401 5776 -345 1054 172 0 0 chr2 75072912 75073075 -178183508 - AluJ SINE Alu -23 289 127 324 70 0 0 chr2 75073075 75073118 -178183465 + (TG)n Simple_repeat Simple_repeat 1 43 0 320 289 22 0 chr2 75073118 75073208 -178183375 + L1MC4 LINE L1 6615 6706 -1336 292 291 0 0 chr2 75073208 75073287 -178183296 + (TATATG)n Simple_repeat Simple_repeat 2 80 0 849 142 0 15 chr2 75073289 75073423 -178183160 - AluJ SINE Alu -170 132 1 230 321 25 25 chr2 75073596 75073677 -178182906 - MIR SINE MIR -6 256 176 518 307 6 11 chr2 75073789 75073968 -178182615 + L1MEd LINE L1 243 420 -5699 1347 174 17 17 chr2 75074430 75074717 -178181866 + L1MD3 LINE L1 7709 7995 0 857 296 62 22 chr2 75075415 75075996 -178180587 + L1MEd LINE L1 2138 2741 -3388 22 0 0 0 chr2 75076017 75076039 -178180544 + AT_rich Low_complexity Low_complexity 1 22 0 7182 21 2 0 chr2 75076538 75077411 -178179172 - L1PA4 LINE L1 0 6155 5281 324 235 78 0 chr2 75078394 75078496 -178178087 - MER103 DNA DNA -56 110 1 1091 144 101 13 chr2 75079916 75080240 -178176343 + L1P4 LINE L1 5311 5685 -480 2021 125 10 3 chr2 75080257 75080546 -178176037 - AluSx SINE Alu -21 291 1 733 272 92 5 chr2 75080609 75080977 -178175606 + L1ME4a LINE L1 5513 5912 -209 2182 132 3 0 chr2 75081062 75081372 -178175211 + AluSx SINE Alu 1 311 -1 607 340 102 61 chr2 75081501 75082089 -178174494 + L1M2 LINE L1 1 612 -6237 5808 105 23 14 chr2 75082315 75082355 -178174228 + L1PA15 LINE L1 4926 4964 -1201 2251 97 7 3 chr2 75082355 75082654 -178173929 - AluSg1 SINE Alu -9 300 1 5808 105 23 14 chr2 75082654 75083849 -178172734 + L1PA15 LINE L1 4964 6165 0 279 256 12 24 chr2 75085404 75085486 -178171097 - L2 LINE L2 0 3313 3233 4926 173 45 21 chr2 75086168 75087160 -178169423 - L1MB8 LINE L1 0 6178 5211 1913 156 27 0 chr2 75087160 75087461 -178169122 - AluJb SINE Alu -2 310 2 4926 173 45 21 chr2 75087461 75088554 -178168029 - L1MB8 LINE L1 -967 5211 4046 1040 256 31 3 chr2 75089029 75089349 -178167234 + L1MCa LINE L1 2 330 -6096 4773 157 174 20 chr2 75089349 75090196 -178166387 + L1MCa LINE L1 921 1636 -4790 1795 115 75 14 chr2 75090196 75090475 -178166108 + AluJo SINE Alu 1 296 -16 4773 157 174 20 chr2 75090475 75091013 -178165570 + L1MCa LINE L1 1636 2523 -3903 1720 168 33 7 chr2 75091023 75091297 -178165286 - AluJo SINE Alu -31 281 1 847 67 25 0 chr2 75091329 75091448 -178165135 - THE1C LTR MaLR 0 375 254 4486 66 0 5 chr2 75091448 75092027 -178164556 + L1PA6 LINE L1 5576 6151 -3 2713 260 16 11 chr2 75092049 75093036 -178163547 + L1MCa LINE L1 2642 3633 -2793 2124 220 37 17 chr2 75093039 75093694 -178162889 + L1MCa LINE L1 4547 5214 -1212 2005 142 85 2 chr2 75093702 75094104 -178162479 + L1MC2 LINE L1 5760 6194 -150 182 289 240 8 chr2 75094121 75094242 -178162341 + L2 LINE L2 2604 2752 -562 747 196 0 23 chr2 75094327 75094460 -178162123 - FLAM_C SINE Alu -13 130 1 347 366 82 53 chr2 75094467 75094710 -178161873 + L2 LINE L2 2999 3248 -24 1544 144 115 7 chr2 75094779 75095049 -178161534 - AluY SINE Alu -12 299 1 188 263 75 25 chr2 75096199 75096279 -178160304 + L3 LINE CR1 1488 1571 -6 295 267 163 0 chr2 75096881 75096967 -178159616 + L2 LINE L2 3213 3312 -1 1537 204 0 11 chr2 75097253 75097538 -178159045 + AluJo SINE Alu 1 282 -30 1658 54 24 5 chr2 75097538 75097743 -178158840 - AluY SINE Alu -19 292 84 272 347 0 0 chr2 75098236 75098311 -178158272 + L2 LINE L2 3189 3263 -50 28 0 0 0 chr2 75098598 75098626 -178157957 + AT_rich Low_complexity Low_complexity 1 28 0 1810 176 0 3 chr2 75098626 75098915 -178157668 - AluJb SINE Alu -24 288 1 1022 195 93 4 chr2 75099110 75099356 -178157227 - AluJo SINE Alu -1 311 44 21 0 0 0 chr2 75099829 75099850 -178156733 + AT_rich Low_complexity Low_complexity 1 21 0 620 261 97 18 chr2 75100169 75100395 -178156188 + L2 LINE L2 1446 1689 -1625 320 133 0 0 chr2 75100697 75100779 -178155804 + Alu SINE Alu 235 316 0 511 263 119 0 chr2 75100802 75100962 -178155621 + MIR SINE MIR 32 210 -52 1105 110 6 0 chr2 75100993 75101156 -178155427 + L1PA16 LINE L1 6000 6163 -3 5749 107 20 3 chr2 75101247 75102141 -178154442 + L1PA15 LINE L1 5256 6164 -1 2347 89 0 0 chr2 75102150 75102442 -178154141 + AluY SINE Alu 1 292 -19 1015 192 49 122 chr2 75102443 75102828 -178153755 + MLT1C LTR MaLR 34 467 0 662 174 34 27 chr2 75102850 75102999 -178153584 + MLT1C-int LTR MaLR 23 172 -1199 304 133 0 0 chr2 75103001 75103046 -178153537 + Alu SINE Alu 1 45 -255 2302 203 15 47 chr2 75103046 75103578 -178153005 + MLT1C-int LTR MaLR 367 881 -490 1759 219 51 72 chr2 75103659 75104170 -178152413 + MLT1C-int LTR MaLR 872 1371 0 997 232 174 19 chr2 75104197 75104610 -178151973 + MLT1D LTR MaLR 27 503 -2 294 247 155 15 chr2 75104747 75104867 -178151716 + MIR SINE MIR 30 147 -61 260 291 37 111 chr2 75104872 75105061 -178151522 + MER5A DNA MER1_type 13 187 -2 295 374 41 16 chr2 75106486 75106609 -178149974 + L2 LINE L2 3132 3257 -15 1920 147 6 25 chr2 75106627 75106941 -178149642 - AluJb SINE Alu -4 308 1 22 0 0 0 chr2 75106973 75106995 -178149588 + AT_rich Low_complexity Low_complexity 1 22 0 354 273 103 27 chr2 75107109 75107293 -178149290 - L1MC4 LINE L1 -2 8040 7724 2393 201 71 42 chr2 75107318 75107939 -178148644 - L1ME2 LINE L1 -10 6154 5516 1817 172 3 3 chr2 75108040 75108342 -178148241 + AluJb SINE Alu 1 302 -10 219 167 0 0 chr2 75108342 75108384 -178148199 + GA-rich Low_complexity Low_complexity 1 42 0 1084 302 143 27 chr2 75109721 75110198 -178146385 - L3 LINE CR1 -1 1576 1045 522 286 15 6 chr2 75110188 75110345 -178146238 - MIR3 SINE MIR -45 163 2 * 351 137 0 0 chr2 75110737 75110788 -178145795 + 5S rRNA rRNA 1 51 -70 252 77 0 0 chr2 75112181 75112220 -178144363 + (CAGC)n Simple_repeat Simple_repeat 1 39 0 2135 115 10 3 chr2 75112560 75112856 -178143727 + AluSq SINE Alu 1 298 -15 2018 131 64 17 chr2 75112874 75113232 -178143351 + THE1C LTR MaLR 1 375 0 2494 101 13 13 chr2 75113232 75113511 -178143072 + THE1C-int LTR MaLR 1 279 -1301 279 0 0 0 chr2 75113511 75113542 -178143041 + (TTA)n Simple_repeat Simple_repeat 3 33 0 14380 26 1 1 chr2 75113542 75115993 -178140590 - L1PA3 LINE L1 -18 6137 3687 2494 101 13 13 chr2 75115993 75116090 -178140493 + THE1C-int LTR MaLR 277 378 -1202 436 256 14 77 chr2 75116159 75116366 -178140217 + L1ME LINE L1 5624 5817 -304 2083 140 0 3 chr2 75116375 75116683 -178139900 - AluSx SINE Alu -5 307 1 2586 147 19 7 chr2 75116840 75117261 -178139322 + MSTB LTR MaLR 1 426 0 226 111 0 0 chr2 75117506 75117542 -178139041 - LTR61 LTR ERV1 -556 39 4 699 172 16 0 chr2 75117802 75117924 -178138659 + FLAM_C SINE Alu 3 126 -7 620 295 100 0 chr2 75117930 75118130 -178138453 + MIR SINE MIR 31 250 -12 56 39 0 0 chr2 75118982 75119059 -178137524 + AT_rich Low_complexity Low_complexity 1 77 0 194 213 0 27 chr2 75119740 75119815 -178136768 + GA-rich Low_complexity Low_complexity 1 73 0 * 270 136 0 0 chr2 75119811 75119855 -178136728 + (GGAGAA)n Simple_repeat Simple_repeat 4 47 0 635 338 88 40 chr2 75121587 75122117 -178134466 - L2 LINE L2 0 3272 2685 235 236 28 14 chr2 75124285 75124357 -178132226 + GA-rich Low_complexity Low_complexity 6 78 0 1765 148 43 30 chr2 75125761 75126065 -178130518 - AluSq SINE Alu -5 308 1 22 0 0 0 chr2 75126118 75126140 -178130443 + AT_rich Low_complexity Low_complexity 1 22 0 381 347 80 10 chr2 75126846 75127045 -178129538 + MIR SINE MIR 20 232 -30 1667 137 3 92 chr2 75127879 75128193 -178128390 - AluJb SINE Alu -6 306 21 302 276 46 75 chr2 75128870 75129044 -178127539 + L1MC1 LINE L1 318 486 -5886 7743 221 58 56 chr2 75129737 75130099 -178126484 + L1MC1 LINE L1 1041 1401 -5168 258 180 0 0 chr2 75130099 75130149 -178126434 + FLAM_A SINE Alu 80 129 -4 7743 221 58 56 chr2 75130149 75135104 -178121479 + L1MC1 LINE L1 1401 6569 0 1932 254 40 30 chr2 75135101 75135420 -178121163 + L1ME2 LINE L1 2827 3142 -3004 * 2431 70 3 6 chr2 75135420 75135732 -178120851 + AluY SINE Alu 1 311 0 1932 254 40 30 chr2 75135732 75136272 -178120311 + L1ME2 LINE L1 3142 3694 -2452 1797 224 41 65 chr2 75136270 75136899 -178119684 + L1ME2 LINE L1 5308 5921 -249 * 21 0 0 0 chr2 75136959 75136980 -178119603 + AT_rich Low_complexity Low_complexity 1 21 0 279 323 39 26 chr2 75137454 75137609 -178118974 + L1ME2 LINE L1 5980 6136 -28 228 86 0 0 chr2 75137795 75137830 -178118753 + (TG)n Simple_repeat Simple_repeat 2 36 0 1889 190 17 125 chr2 75137877 75138021 -178118562 + MLT2B1 LTR ERVL 1 159 -361 730 212 62 0 chr2 75138021 75138167 -178118416 + FRAM SINE Alu 1 155 -11 1889 190 17 125 chr2 75138167 75138605 -178117978 + MLT2B1 LTR ERVL 159 520 0 368 308 11 16 chr2 75139369 75139510 -178117073 - MIR SINE MIR -54 154 21 245 280 0 97 chr2 75140334 75140444 -178116139 - MER5A DNA MER1_type -34 155 60 360 0 0 0 chr2 75140444 75140484 -178116099 + (TG)n Simple_repeat Simple_repeat 2 41 0 245 280 0 97 chr2 75140484 75140539 -178116044 - MER5A DNA MER1_type -129 60 1 3114 217 51 40 chr2 75140593 75140807 -178115776 - L1MD2 LINE L1 -1 6358 6148 225 0 0 0 chr2 75140807 75140832 -178115751 + (TG)n Simple_repeat Simple_repeat 2 26 0 3114 217 51 40 chr2 75140832 75141474 -178115109 - L1MD2 LINE L1 -211 6148 5492 377 77 0 77 chr2 75142709 75142774 -178113809 - AluJo SINE Alu -157 145 86 23 92 0 0 chr2 75143138 75143203 -178113380 + AT_rich Low_complexity Low_complexity 1 65 0 2337 97 0 0 chr2 75143222 75143521 -178113062 + AluSc SINE Alu 1 299 -10 442 183 0 43 chr2 75143713 75143806 -178112777 - MER58B DNA MER1_type 0 341 253 214 301 14 14 chr2 75144271 75144344 -178112239 - MIR SINE MIR -69 139 67 35 0 0 0 chr2 75144371 75144406 -178112177 + AT_rich Low_complexity Low_complexity 1 35 0 1462 139 0 88 chr2 75145477 75145772 -178110811 - L1PA13 LINE L1 -12 6151 5883 16061 105 15 54 chr2 75145772 75149258 -178107325 - L1P3 LINE L1 -2990 3471 7 11408 203 61 5 chr2 75149262 75152077 -178104506 - L1PA12 LINE L1 -2141 5443 2471 383 301 15 67 chr2 75152100 75152297 -178104286 - L1PA12 LINE L1 -5896 1685 960 * 487 153 0 0 chr2 75152296 75152381 -178104202 - L1PA12 LINE L1 -7351 230 146 * 549 302 72 47 chr2 75152353 75152823 -178103760 - L1MC4a LINE L1 -1911 7335 6854 818 211 41 1 chr2 75153320 75153495 -178103088 - MIR SINE MIR -11 251 72 540 45 0 0 chr2 75153589 75153656 -178102927 + (TATATG)n Simple_repeat Simple_repeat 1 67 0 343 218 136 9 chr2 75153877 75153987 -178102596 + MIR SINE MIR 84 207 -55 203 213 21 0 chr2 75154518 75154565 -178102018 - MIR SINE MIR -63 145 98 381 336 72 34 chr2 75154714 75155006 -178101577 - L1ME4a LINE L1 -272 5849 5547 277 311 28 85 chr2 75155277 75155433 -178101150 + L2 LINE L2 2619 2753 -561 1823 86 63 34 chr2 75155433 75155702 -178100881 - AluSc SINE Alu -17 292 16 277 311 28 85 chr2 75155702 75155828 -178100755 + L2 LINE L2 2753 2885 -429 516 232 0 0 chr2 75156781 75156880 -178099703 + MIR SINE MIR 130 228 -34 4963 149 38 28 chr2 75157947 75159000 -178097583 - L1MB5 LINE L1 -36 6138 5091 494 263 175 31 chr2 75159056 75159122 -178097461 - MIR SINE MIR 0 262 207 351 0 0 0 chr2 75159122 75159161 -178097422 + (CA)n Simple_repeat Simple_repeat 2 40 0 494 263 175 31 chr2 75159161 75159322 -178097261 - MIR SINE MIR -55 207 2 2100 255 66 31 chr2 75159383 75159971 -178096612 - MLT1E2 LTR MaLR 0 626 18 1369 66 6 0 chr2 75160867 75161071 -178095512 + AluSq SINE Alu 123 327 0 230 322 115 0 chr2 75161108 75161195 -178095388 - MIR3 SINE MIR -44 164 68 1084 165 4 76 chr2 75161413 75161662 -178094921 + L1PA10 LINE L1 5937 6167 -1 1862 314 52 38 chr2 75163109 75163606 -178092977 - L2 LINE L2 -5 3308 2798 222 37 0 0 chr2 75163606 75163633 -178092950 + (TG)n Simple_repeat Simple_repeat 1 27 0 1862 314 52 38 chr2 75163633 75164101 -178092482 - L2 LINE L2 -515 2798 2338 480 365 98 30 chr2 75164905 75165335 -178091248 - L2 LINE L2 -4 3268 2810 338 0 0 23 chr2 75165825 75165868 -178090715 + (CA)n Simple_repeat Simple_repeat 2 43 0 1712 127 8 0 chr2 75166670 75166915 -178089668 - AluSx SINE Alu -17 295 49 26 0 0 0 chr2 75167378 75167404 -178089179 + AT_rich Low_complexity Low_complexity 1 26 0 3492 205 94 78 chr2 75167475 75168113 -178088470 + L1ME1 LINE L1 3940 4566 -1580 2186 99 0 7 chr2 75168113 75168406 -178088177 - AluSc SINE Alu -18 291 1 3492 205 94 78 chr2 75168406 75169205 -178087378 + L1ME1 LINE L1 4566 5400 -746 1407 251 157 13 chr2 75169195 75169559 -178087024 + L1MB7 LINE L1 5316 5626 -558 * 1938 109 4 0 chr2 75169559 75169825 -178086758 + AluSx SINE Alu 36 302 -10 1407 251 157 13 chr2 75169825 75170167 -178086416 + L1MB7 LINE L1 5626 6165 -19 2274 205 77 38 chr2 75170183 75170853 -178085730 + L1ME1 LINE L1 5474 6332 -2 7089 52 7 5 chr2 75170872 75172269 -178084314 + L1PA7 LINE L1 4752 6152 -2 345 261 94 44 chr2 75172792 75172972 -178083611 - MIR SINE MIR 0 262 74 589 51 13 0 chr2 75175011 75175090 -178081493 + MADE1 DNA Mariner 1 80 0 182 311 0 16 chr2 75175676 75175737 -178080846 + L2 LINE L2 222 281 -3033 295 189 274 21 chr2 75176767 75176862 -178079721 + L2 LINE L2 3190 3308 -5 1110 263 20 32 chr2 75178990 75179399 -178077184 + MLT1H LTR MaLR 97 549 0 220 329 59 24 chr2 75179481 75179566 -178077017 + L2 LINE L2 3161 3248 -24 508 318 108 9 chr2 75180801 75181024 -178075559 + L3 LINE CR1 1332 1576 -1 429 20 0 0 chr2 75183820 75183870 -178072713 + (CA)n Simple_repeat Simple_repeat 1 50 0 195 42 0 0 chr2 75184291 75184315 -178072268 + (CA)n Simple_repeat Simple_repeat 2 25 0 2070 141 7 7 chr2 75184996 75185301 -178071282 + AluSq SINE Alu 1 305 -8 829 297 18 5 chr2 75186328 75186547 -178070036 + MIR SINE MIR 9 230 -32 22 35 0 0 chr2 75186835 75186864 -178069719 + AT_rich Low_complexity Low_complexity 1 29 0 459 152 0 0 chr2 75187178 75187257 -178069326 + (CA)n Simple_repeat Simple_repeat 2 80 0 27 81 0 0 chr2 75188192 75188254 -178068329 + AT_rich Low_complexity Low_complexity 1 62 0 553 109 43 0 chr2 75189484 75189576 -178067007 + L1MB1 LINE L1 6068 6163 -5 262 194 30 15 chr2 75189583 75189650 -178066933 + L1MC1 LINE L1 5219 5286 -860 * 2765 222 70 48 chr2 75189644 75190639 -178065944 + L1 LINE L1 2230 3246 -2900 2283 146 17 109 chr2 75190636 75190924 -178065659 + L1M2 LINE L1 5323 5636 -676 * 457 235 70 17 chr2 75190924 75191039 -178065544 + FLAM_A SINE Alu 1 121 -12 192 40 0 0 chr2 75191042 75191067 -178065516 + (CAA)n Simple_repeat Simple_repeat 1 25 0 2283 146 17 109 chr2 75191067 75191314 -178065269 + L1M2 LINE L1 5638 5812 -500 8822 167 44 47 chr2 75191350 75191415 -178065168 - L1M4c LINE L1 -4448 1936 1872 2072 132 7 3 chr2 75191415 75191718 -178064865 + AluSx SINE Alu 1 304 -8 8822 167 44 47 chr2 75191718 75193554 -178063029 - L1M4c LINE L1 -4512 1872 42 4115 166 10 1 chr2 75193558 75194286 -178062297 + L1MC1 LINE L1 5599 6332 -1 1059 161 121 37 chr2 75195778 75196076 -178060507 - MER33 DNA MER1_type -1 323 1 791 131 31 8 chr2 75196257 75196387 -178060196 - MLT1A1 LTR MaLR 0 365 233 320 242 0 0 chr2 75196498 75196560 -178060023 + MER5A DNA MER1_type 128 189 0 2458 56 0 10 chr2 75196560 75196862 -178059721 + AluY SINE Alu 1 299 -12 226 73 49 0 chr2 75196882 75196923 -178059660 + GA-rich Low_complexity Low_complexity 2 44 0 228 345 60 72 chr2 75196950 75197185 -178059398 + L3 LINE CR1 1041 1272 -305 180 377 48 34 chr2 75197244 75197390 -178059193 + L3 LINE CR1 1429 1576 -1 327 285 157 35 chr2 75197477 75197649 -178058934 - HAL1 LINE L1 -864 1643 1451 613 297 140 52 chr2 75197663 75198569 -178058014 - L1MEd LINE L1 -5053 1066 81 1867 164 0 10 chr2 75198584 75198888 -178057695 - AluJb SINE Alu -6 306 6 23 78 0 0 chr2 75199045 75199096 -178057487 + AT_rich Low_complexity Low_complexity 1 51 0 387 298 49 10 chr2 75199629 75199834 -178056749 + L1M4 LINE L1 15 227 -6315 43109 46 1 2 chr2 75199950 75206089 -178050494 - L1PA4 LINE L1 -11 6144 8 1533 158 16 79 chr2 75206099 75206415 -178050168 - AluJo SINE Alu -16 296 1 377 287 37 9 chr2 75206642 75206750 -178049833 + L1M4 LINE L1 608 718 -5824 1151 202 58 47 chr2 75206863 75207535 -178049048 + L1M4 LINE L1 817 2322 -4324 986 223 42 11 chr2 75207545 75207805 -178048778 + L1M4 LINE L1 3877 4144 -2500 395 311 92 12 chr2 75207872 75208036 -178048547 - L1MEc LINE L1 -4839 1557 1381 653 107 2 2 chr2 75208044 75208157 -178048426 - L1PB4 LINE L1 -256 5900 5785 2181 118 0 3 chr2 75208157 75208461 -178048122 - AluSq SINE Alu -10 303 1 653 107 2 2 chr2 75208461 75208478 -178048105 - L1PB4 LINE L1 -370 5786 5770 6953 182 40 27 chr2 75208551 75210700 -178045883 - L1PB4 LINE L1 -365 5791 3614 333 0 0 0 chr2 75210880 75210917 -178045666 + (TG)n Simple_repeat Simple_repeat 2 38 0 2155 122 0 0 chr2 75210931 75211227 -178045356 - AluSx SINE Alu -13 299 4 1165 260 40 67 chr2 75211251 75211655 -178044928 - MLT2B1 LTR ERVL -127 393 1 2153 96 4 4 chr2 75211984 75212305 -178044278 - AluSc SINE Alu 0 322 2 273 262 12 36 chr2 75212404 75212488 -178044095 - MLT1J LTR MaLR -202 309 228 505 292 69 26 chr2 75213739 75213972 -178042611 - MIR SINE MIR 0 262 20 192 179 0 0 chr2 75214552 75214591 -178041992 + T-rich Low_complexity Low_complexity 1 39 0 180 259 94 24 chr2 75215585 75215670 -178040913 - MIR SINE MIR -101 161 71 2136 109 7 7 chr2 75216251 75216545 -178040038 + AluSg SINE Alu 1 294 -16 183 42 0 0 chr2 75216551 75216575 -178040008 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 240 257 20 30 chr2 75216833 75216934 -178039649 + L1MEc LINE L1 1368 1467 -5655 309 305 52 11 chr2 75217025 75217199 -178039384 + L1MEc LINE L1 1344 1524 -4899 279 298 0 33 chr2 75217653 75217774 -178038809 + L1MEc LINE L1 1757 1873 -5058 598 222 9 0 chr2 75217776 75217884 -178038699 - FLAM_A SINE Alu -33 109 1 731 290 45 46 chr2 75217915 75218367 -178038216 + L1MEc LINE L1 1767 2357 -4729 4589 272 77 66 chr2 75218370 75219545 -178037038 + L1MEc LINE L1 44 1204 -5011 732 105 0 0 chr2 75219545 75219650 -178036933 - AluSg/x SINE Alu -15 295 191 4589 272 77 66 chr2 75219650 75221448 -178035135 + L1MEc LINE L1 1204 3144 -3071 1021 159 55 64 chr2 75221448 75221668 -178034915 - MER20 DNA MER1_type 0 219 2 4589 272 77 66 chr2 75221668 75222692 -178033891 + L1MEc LINE L1 3144 4155 -2060 297 202 67 11 chr2 75222688 75222777 -178033806 + L1ME2 LINE L1 5839 5932 -232 * 678 200 0 47 chr2 75222784 75222954 -178033629 - L1MA9 LINE L1 -38 6274 6113 * 2761 198 10 0 chr2 75222953 75223448 -178033135 - MST-int LTR MaLR -735 916 417 7776 163 15 9 chr2 75223484 75225397 -178031186 - L1MA9 LINE L1 -498 5793 3872 5381 132 0 4 chr2 75225479 75226712 -178029871 - L1PA15 LINE L1 0 6165 4931 2990 181 27 19 chr2 75226712 75227351 -178029232 + L1P LINE L1 4248 4891 -1255 396 273 62 10 chr2 75228269 75228478 -178028105 + L1ME3A LINE L1 5733 5952 -218 192 77 0 0 chr2 75228980 75229006 -178027577 + (TCCCC)n Simple_repeat Simple_repeat 4 29 0 2125 75 21 3 chr2 75229006 75229288 -178027295 - AluY SINE Alu -24 287 1 352 321 138 28 chr2 75230335 75230702 -178025881 - MLT1L LTR MaLR -3 611 109 512 342 33 50 chr2 75231028 75231487 -178025096 + L1MEc LINE L1 195 645 -5918 5321 159 30 11 chr2 75231683 75232678 -178023905 - L1MA8 LINE L1 -24 6267 5254 336 228 29 50 chr2 75232825 75232966 -178023617 + L1MEc LINE L1 786 1103 -5361 1038 271 33 28 chr2 75233014 75233474 -178023109 + L1MEc LINE L1 1324 1935 -4620 818 230 113 44 chr2 75233478 75233825 -178022758 + MLT1G LTR MaLR 7 353 -242 2948 238 45 19 chr2 75233825 75234809 -178021774 - L1M4 LINE L1 -2998 3148 2140 4363 104 31 32 chr2 75234810 75235553 -178021030 - L1MA2 LINE L1 0 6304 5563 406 211 44 11 chr2 75235566 75235656 -178020927 - AluSg SINE Alu -10 292 200 999 119 7 7 chr2 75235656 75235799 -178020784 - AluSg SINE Alu -162 148 6 1954 151 11 0 chr2 75235800 75236289 -178020294 - L1M1 LINE L1 -731 5574 5080 1904 104 50 14 chr2 75236291 75236570 -178020013 + AluSx SINE Alu 1 289 -23 1484 96 57 5 chr2 75236670 75236879 -178019704 - AluY SINE Alu -91 220 1 299 276 95 9 chr2 75237207 75237312 -178019271 - L3 LINE CR1 -3 1574 1461 315 0 0 0 chr2 75239062 75239097 -178017486 + (TG)n Simple_repeat Simple_repeat 2 36 0 226 350 102 28 chr2 75239927 75240104 -178016479 - L2 LINE L2 -212 3060 2871 200 387 34 17 chr2 75240490 75240609 -178015974 + MIR SINE MIR 20 140 -122 25 0 0 0 chr2 75240856 75240881 -178015702 + AT_rich Low_complexity Low_complexity 1 25 0 1820 137 108 15 chr2 75241217 75241560 -178015023 - THE1C LTR MaLR 0 375 1 1505 207 10 7 chr2 75241631 75241955 -178014628 + AluJb SINE Alu 3 312 0 307 271 81 119 chr2 75242934 75243144 -178013439 + MIR SINE MIR 5 206 -56 222 150 0 0 chr2 75243227 75243267 -178013316 + (GA)n Simple_repeat Simple_repeat 2 41 0 216 309 0 0 chr2 75243269 75243324 -178013259 + MIR SINE MIR 208 262 0 350 299 77 51 chr2 75243336 75243570 -178013013 + MIR SINE MIR 1 240 -22 199 362 95 9 chr2 75243822 75243927 -178012656 - L2 LINE L2 -8 3264 3151 390 259 40 81 chr2 75243991 75244165 -178012418 + MIR SINE MIR 52 218 -44 21 36 0 0 chr2 75246298 75246326 -178010257 + AT_rich Low_complexity Low_complexity 1 28 0 12917 25 2 0 chr2 75246478 75248777 -178007806 + L1PA3 LINE L1 3855 6155 0 21 71 0 0 chr2 75248825 75248867 -178007716 + AT_rich Low_complexity Low_complexity 1 42 0 29 47 0 0 chr2 75248900 75248943 -178007640 + AT_rich Low_complexity Low_complexity 1 43 0 498 325 24 30 chr2 75248944 75249282 -178007301 - L1ME LINE L1 -318 5803 5468 1182 183 72 103 chr2 75249799 75250176 -178006407 + MLT1A1 LTR MaLR 1 365 0 454 310 64 25 chr2 75250392 75250703 -178005880 - L1ME LINE L1 -2190 3956 3631 1811 164 30 38 chr2 75251184 75251549 -178005034 - MLT1A1 LTR MaLR 0 365 4 422 319 73 32 chr2 75251914 75252256 -178004327 + L1ME LINE L1 533 888 -5182 243 146 24 0 chr2 75253013 75253054 -178003529 - MER103 DNA DNA -55 111 70 292 352 99 13 chr2 75253111 75253344 -178003239 + L2 LINE L2 1839 2091 -1223 2375 97 0 0 chr2 75253475 75253785 -178002798 + AluSx SINE Alu 3 312 0 5685 154 35 18 chr2 75254061 75254156 -178002427 - L1MA8 LINE L1 -7 6284 6192 362 62 231 15 chr2 75254156 75254221 -178002362 + MADE1 DNA Mariner 2 80 0 5685 154 35 18 chr2 75254221 75255176 -178001407 - L1MA8 LINE L1 -99 6192 5192 2178 124 0 0 chr2 75255176 75255482 -178001101 - AluSx SINE Alu -6 306 1 5685 154 35 18 chr2 75255482 75256246 -178000337 - L1MA8 LINE L1 -1099 5192 4442 1274 202 60 3 chr2 75256346 75256663 -177999920 - L1MC2 LINE L1 -10 6334 6000 1322 247 109 19 chr2 75256665 75257257 -177999326 - L1ME LINE L1 -2960 3186 2548 11764 207 33 21 chr2 75257443 75257882 -177998701 - L1 LINE L1 -1447 5401 4969 7385 29 10 0 chr2 75257882 75259013 -177997570 - L1PA4 LINE L1 -1 6154 5016 11764 207 33 21 chr2 75259013 75263882 -177992701 - L1 LINE L1 -1879 4969 1 183 189 27 27 chr2 75264011 75264085 -177992498 + CT-rich Low_complexity Low_complexity 3 76 0 1667 302 119 23 chr2 75264432 75265465 -177991118 + L2 LINE L2 2094 3311 -2 1962 166 0 3 chr2 75267332 75267628 -177988955 + AluSx SINE Alu 1 295 -17 2425 99 21 21 chr2 75268337 75268711 -177987872 + THE1C LTR MaLR 1 374 -1 374 321 61 30 chr2 75269005 75269170 -177987413 + MIR SINE MIR 20 189 -73 4435 60 8 61 chr2 75271557 75271688 -177984895 - L1PA8A LINE L1 0 6131 5995 2515 39 0 29 chr2 75271688 75272000 -177984583 + AluY SINE Alu 1 303 -8 4435 60 8 61 chr2 75272000 75272521 -177984062 - L1PA8A LINE L1 -136 5995 5514 1813 272 69 35 chr2 75273456 75273499 -177983084 + L2 LINE L2 1155 1195 -2119 2305 114 3 0 chr2 75273499 75273805 -177982778 + AluSx SINE Alu 1 307 -5 1813 272 69 35 chr2 75273805 75274416 -177982167 + L2 LINE L2 1195 1831 -1483 2774 182 68 39 chr2 75274431 75274755 -177981828 - L1MC3 LINE L1 -9 7776 7463 2041 109 4 0 chr2 75274755 75275071 -177981512 - AluSg SINE Alu 0 322 6 2774 182 68 39 chr2 75275071 75275438 -177981145 - L1MC3 LINE L1 -322 7463 7064 3226 270 107 21 chr2 75275438 75276769 -177979814 + L2 LINE L2 1823 3280 -33 673 203 208 24 chr2 75276905 75277117 -177979466 - MIR SINE MIR 0 262 12 366 329 121 38 chr2 75277608 75277848 -177978735 + MIR SINE MIR 2 261 -1 203 294 0 0 chr2 75278602 75278653 -177977930 + MIR3 SINE MIR 133 183 -25 21 36 0 0 chr2 75279540 75279568 -177977015 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 75279928 75279950 -177976633 + AT_rich Low_complexity Low_complexity 1 22 0 492 274 73 54 chr2 75279992 75280514 -177976069 - L1MCa LINE L1 -4712 2410 1783 * 526 286 58 42 chr2 75280500 75280811 -177975772 - L1MCa LINE L1 -6089 334 19 601 170 0 106 chr2 75281085 75281108 -177975475 - FLAM_A SINE Alu -175 127 103 2220 112 10 0 chr2 75281108 75281402 -177975181 + AluSc SINE Alu 1 297 -12 601 170 0 106 chr2 75281402 75281519 -177975064 - FLAM_A SINE Alu -199 103 2 303 270 0 14 chr2 75281519 75281589 -177974994 - MER5A DNA MER1_type -113 76 8 * 346 338 8 8 chr2 75281550 75281683 -177974900 - L3 LINE CR1 -558 1019 887 311 127 55 0 chr2 75282604 75282659 -177973924 - AluJb SINE Alu -169 133 76 738 257 183 6 chr2 75283632 75283970 -177972613 - MLT1I LTR MaLR -2 407 10 252 135 0 0 chr2 75284573 75284610 -177971973 + LOR1a LTR ERV1 461 497 0 260 247 41 0 chr2 75284785 75284882 -177971701 - MLT1I LTR MaLR -2 407 307 1367 106 157 17 chr2 75284910 75285145 -177971438 - AluSg1 SINE Alu -41 268 1 377 341 47 32 chr2 75285380 75285720 -177970863 - L1M4 LINE L1 -3692 2454 2110 641 163 27 7 chr2 75285918 75286065 -177970518 - L1MB3 LINE L1 -76 6107 5958 7286 184 22 13 chr2 75286069 75287926 -177968657 - L1M4 LINE L1 -3567 3281 1406 6914 64 0 4 chr2 75287926 75288928 -177967655 - L1PA7 LINE L1 -1 6153 5156 5983 122 107 134 chr2 75289337 75291080 -177965503 + pTR5 LTR ERV1 743 2438 0 379 311 50 41 chr2 75291160 75291379 -177965204 - L1M4 LINE L1 -1850 4296 4076 267 203 0 0 chr2 75291427 75291486 -177965097 + (CA)n Simple_repeat Simple_repeat 1 59 0 225 286 80 17 chr2 75291617 75291792 -177964791 - L1M4 LINE L1 -2326 3820 3635 303 294 98 38 chr2 75291990 75292174 -177964409 - L1M4 LINE L1 -2694 3452 3258 1935 63 0 0 chr2 75292523 75292775 -177963808 - L1PA13 LINE L1 -1 6162 5911 293 238 175 35 chr2 75293012 75293155 -177963428 - MER104 DNA Tc2 -15 165 3 389 283 55 97 chr2 75293160 75293468 -177963115 - HAL1b LINE L1 -418 930 636 259 234 13 13 chr2 75294503 75294580 -177962003 + MER52A LTR ERV1 1 77 -1678 341 292 76 116 chr2 75294585 75295044 -177961539 - L1M4 LINE L1 -5482 1367 927 6225 199 42 15 chr2 75295080 75296434 -177960149 + MER52A LTR ERV1 365 1755 0 1142 206 5 9 chr2 75297309 75297528 -177959055 + MER20 DNA MER1_type 2 219 0 221 298 0 0 chr2 75297568 75297625 -177958958 + L2 LINE L2 3257 3313 0 1892 147 3 39 chr2 75298045 75298351 -177958232 + AluSx SINE Alu 1 295 -17 1067 220 92 11 chr2 75299006 75299177 -177957406 - AluJo SINE Alu -6 296 93 594 0 0 0 chr2 75299177 75299243 -177957340 + (TCTA)n Simple_repeat Simple_repeat 1 66 0 1067 220 92 11 chr2 75299243 75299344 -177957239 - AluJo SINE Alu -209 93 2 29287 104 13 11 chr2 75299348 75299729 -177956854 - L1PA7 LINE L1 0 6469 6090 1900 118 15 4 chr2 75299729 75300001 -177956582 - AluSq SINE Alu 0 313 39 29287 104 13 11 chr2 75300001 75305366 -177951217 - L1PA7 LINE L1 -379 6090 706 26 0 0 0 chr2 75305566 75305592 -177950991 + AT_rich Low_complexity Low_complexity 1 26 0 195 273 39 65 chr2 75305711 75305788 -177950795 + L2 LINE L2 3235 3309 -4 1445 213 6 50 chr2 75306034 75306354 -177950229 + AluJo SINE Alu 1 306 -6 397 262 107 7 chr2 75306728 75306877 -177949706 + MIR SINE MIR 57 220 -42 3331 168 27 9 chr2 75306951 75307610 -177948973 - L1PA13 LINE L1 -4509 3065 2395 1792 197 8 11 chr2 75307612 75307963 -177948620 - L1PA13 LINE L1 -5998 1583 1234 * 9249 188 69 22 chr2 75307954 75310780 -177945803 + L1PA14 LINE L1 1688 4799 -1347 2330 92 13 0 chr2 75310780 75311086 -177945497 + AluSg SINE Alu 1 310 0 9249 188 69 22 chr2 75311086 75311268 -177945315 + L1PA14 LINE L1 4799 4971 -1175 2436 120 28 8 chr2 75311271 75311628 -177944955 - THE1B LTR MaLR 0 364 1 11323 100 9 1 chr2 75311628 75313196 -177943387 - THE1B-int LTR MaLR 0 1580 1 2112 126 66 20 chr2 75313196 75313544 -177943039 - THE1B LTR MaLR 0 364 1 3067 106 30 4 chr2 75313544 75314005 -177942578 + L1PA14 LINE L1 5307 5779 -382 863 125 0 0 chr2 75314007 75314135 -177942448 + AluSp/q SINE Alu 176 303 -10 2527 99 13 13 chr2 75314136 75314529 -177942054 + L1PA14 LINE L1 5769 6161 0 2084 103 31 14 chr2 75314564 75314855 -177941728 + AluSc SINE Alu 1 296 -13 316 361 41 33 chr2 75314966 75315088 -177941495 + L2 LINE L2 3141 3263 -9 458 371 71 25 chr2 75315229 75315509 -177941074 - L3 LINE CR1 -431 1146 854 194 369 78 19 chr2 75315599 75315867 -177940716 + L2 LINE L2 2566 2849 -465 1016 65 0 0 chr2 75316924 75317048 -177939535 - AluY SINE Alu -18 293 170 26 0 0 0 chr2 75317497 75317523 -177939060 + AT_rich Low_complexity Low_complexity 1 26 0 853 153 0 8 chr2 75318451 75318582 -177938001 - FLAM_C SINE Alu -3 130 1 1201 251 68 13 chr2 75319148 75319531 -177937052 + L1ME1 LINE L1 5732 6135 -31 873 204 6 0 chr2 75320456 75320618 -177935965 - AluJo SINE Alu -149 163 1 25 0 0 0 chr2 75320955 75320980 -177935603 + AT_rich Low_complexity Low_complexity 1 25 0 2172 127 0 3 chr2 75322576 75322875 -177933708 - AluSx SINE Alu -12 300 3 1256 242 17 20 chr2 75322880 75323178 -177933405 - AluJo SINE Alu -13 299 3 24 0 0 0 chr2 75323370 75323394 -177933189 + AT_rich Low_complexity Low_complexity 1 24 0 271 293 80 25 chr2 75323538 75324064 -177932519 + L1M4 LINE L1 2851 3405 -2741 375 263 32 45 chr2 75324122 75324278 -177932305 - L1M4 LINE L1 -3531 2615 2462 1891 182 109 5 chr2 75324498 75324882 -177931701 + MSTB LTR MaLR 1 424 -2 232 135 39 0 chr2 75325057 75325109 -177931474 + A-rich Low_complexity Low_complexity 3 56 0 1806 171 0 10 chr2 75325110 75325409 -177931174 - AluJo SINE Alu -16 296 1 1765 191 0 0 chr2 75325612 75325915 -177930668 + AluSx SINE Alu 1 303 -9 369 318 63 59 chr2 75326023 75326278 -177930305 - HAL1 LINE L1 -1137 1370 1115 3985 167 21 4 chr2 75326482 75327225 -177929358 - L1MC2 LINE L1 -118 6295 5540 1658 202 0 0 chr2 75327252 75327554 -177929029 - AluJb SINE Alu -10 302 1 460 217 12 0 chr2 75327554 75327677 -177928906 - L1MC2 LINE L1 -844 5371 5245 1909 118 4 0 chr2 75327783 75328046 -177928537 - AluY SINE Alu -45 266 3 7303 167 27 4 chr2 75328047 75329444 -177927139 - L1 LINE L1 -1260 6305 4877 3641 171 11 110 chr2 75329447 75329608 -177926975 - L1 LINE L1 -6752 813 638 17073 40 2 0 chr2 75329608 75332446 -177924137 - L1PA5 LINE L1 -8 6146 3292 3641 171 11 110 chr2 75332446 75333169 -177923414 - L1 LINE L1 -6927 638 16 4215 272 67 40 chr2 75333171 75335330 -177921253 - L1MC2 LINE L1 -4140 3606 1389 316 218 82 18 chr2 75335361 75335471 -177921112 - L1ME4a LINE L1 -2 6119 6003 375 284 103 34 chr2 75335553 75335757 -177920826 - MLT1L LTR MaLR -384 231 14 435 375 134 0 chr2 75335886 75336102 -177920481 - L2 LINE L2 -2803 511 267 469 322 87 21 chr2 75336729 75336971 -177919612 + MIR SINE MIR 3 260 -2 270 0 0 0 chr2 75336987 75337017 -177919566 + (CAT)n Simple_repeat Simple_repeat 3 32 0 251 245 252 34 chr2 75337806 75337953 -177918630 - L2 LINE L2 -549 2765 2587 264 275 92 58 chr2 75337998 75338118 -177918465 + MIR SINE MIR 96 219 -43 29 0 0 0 chr2 75338129 75338158 -177918425 + AT_rich Low_complexity Low_complexity 1 29 0 436 341 59 16 chr2 75338483 75338831 -177917752 - ERVL LTR ERVL -3457 2307 1918 880 85 0 0 chr2 75339663 75339781 -177916802 - AluY SINE Alu -7 304 187 1861 181 0 0 chr2 75340230 75340522 -177916061 + AluSx SINE Alu 3 294 -18 2058 158 75 6 chr2 75340523 75340883 -177915700 - MSTB LTR MaLR -34 392 8 1312 201 15 114 chr2 75341042 75341444 -177915139 - MLT1A1 LTR MaLR 0 365 4 365 308 19 19 chr2 75341551 75341655 -177914928 + L2 LINE L2 3210 3313 0 411 305 102 20 chr2 75341929 75342126 -177914457 + MIR SINE MIR 2 214 -48 503 310 38 43 chr2 75342157 75342341 -177914242 + MIR3 SINE MIR 23 205 -3 205 263 0 81 chr2 75342376 75342475 -177914108 + MIR SINE MIR 168 258 -4 1831 138 25 28 chr2 75342532 75342615 -177913968 - Tigger7 DNA MER2_type 0 2487 2405 1048 158 73 163 chr2 75342615 75342914 -177913669 - MER7A DNA MER2_type -2692 346 89 1857 160 7 3 chr2 75342914 75343207 -177913376 - AluSx SINE Alu -18 294 1 1048 158 73 163 chr2 75343207 75343288 -177913295 - MER7A DNA MER2_type -2949 89 2 1831 138 25 28 chr2 75343288 75343530 -177913053 - Tigger7 DNA MER2_type -82 2405 2163 1264 198 38 30 chr2 75343524 75343787 -177912796 + Tigger7 DNA MER2_type 82 346 -387 * 415 208 0 13 chr2 75343788 75343865 -177912718 - Tigger7 DNA MER2_type -628 77 2 1085 190 0 0 chr2 75344057 75344231 -177912352 - FAM SINE Alu -1 174 1 21 0 0 0 chr2 75344574 75344595 -177911988 + AT_rich Low_complexity Low_complexity 1 21 0 2092 112 0 7 chr2 75346945 75347230 -177909353 + AluSx SINE Alu 3 285 -27 327 85 0 0 chr2 75347230 75347277 -177909306 + (CAATA)n Simple_repeat Simple_repeat 2 48 0 189 325 73 49 chr2 75348406 75348529 -177908054 + MIR3 SINE MIR 44 169 -39 377 105 29 181 chr2 75348919 75349024 -177907559 - MER53 DNA DNA 0 189 101 211 313 92 8 chr2 75349091 75349222 -177907361 - L2 LINE L2 -1428 1886 1745 25 0 0 0 chr2 75350416 75350441 -177906142 + AT_rich Low_complexity Low_complexity 1 25 0 1855 236 52 97 chr2 75350631 75351405 -177905178 - MER21B LTR ERV1 -124 739 1 369 248 30 0 chr2 75351454 75351554 -177905029 - MIR SINE MIR -62 146 51 460 260 47 0 chr2 75352614 75352741 -177903842 - L1M4 LINE L1 -1530 4616 4484 505 304 48 35 chr2 75352819 75353191 -177903392 - L1M4 LINE L1 -2143 4003 3627 315 339 139 43 chr2 75353369 75353714 -177902869 - L1MEd LINE L1 -5738 381 4 230 263 84 21 chr2 75353931 75354026 -177902557 - L1M4 LINE L1 -2289 3857 3757 646 193 62 107 chr2 75354403 75354558 -177902025 - L1MB8 LINE L1 0 6178 6036 448 48 0 0 chr2 75354558 75354620 -177901963 + L1PA10 LINE L1 6103 6164 -4 646 193 62 107 chr2 75354620 75354707 -177901876 - L1MB8 LINE L1 -142 6036 5947 198 0 0 0 chr2 75355197 75355219 -177901364 + (A)n Simple_repeat Simple_repeat 1 22 0 2137 131 3 6 chr2 75355523 75355835 -177900748 + AluSx SINE Alu 1 311 -1 1434 235 28 43 chr2 75356003 75356395 -177900188 + MLT1B LTR MaLR 5 390 0 24 32 0 0 chr2 75356717 75356748 -177899835 + AT_rich Low_complexity Low_complexity 1 31 0 2088 121 0 0 chr2 75356848 75357167 -177899416 - AluSx SINE Alu 0 319 1 318 344 32 41 chr2 75357272 75357586 -177898997 + L1MC/D LINE L1 5508 5818 -303 22 56 0 0 chr2 75357644 75357680 -177898903 + AT_rich Low_complexity Low_complexity 1 36 0 607 347 119 31 chr2 75358246 75358886 -177897697 + L2 LINE L2 2273 2968 -346 187 250 0 83 chr2 75358902 75358962 -177897621 - L2 LINE L2 -836 2478 2424 355 267 161 25 chr2 75359160 75359321 -177897262 + L2 LINE L2 3074 3256 -57 1251 20 0 0 chr2 75359348 75359494 -177897089 + (GGAA)n Simple_repeat Simple_repeat 1 146 0 915 286 15 34 chr2 75359692 75359958 -177896625 + MIR SINE MIR 2 262 0 1158 199 14 14 chr2 75361117 75361338 -177895245 + MER58A DNA MER1_type 4 224 0 303 96 0 0 chr2 75361610 75361662 -177894921 + (TAAA)n Simple_repeat Simple_repeat 3 54 0 389 241 117 48 chr2 75361780 75361925 -177894658 + MIR SINE MIR 98 252 -10 333 47 0 0 chr2 75361974 75362017 -177894566 + (CA)n Simple_repeat Simple_repeat 2 44 0 1533 247 58 22 chr2 75362778 75363224 -177893359 + MLT1C LTR MaLR 6 467 0 2127 117 17 0 chr2 75363275 75363574 -177893009 - AluSc SINE Alu -5 304 1 411 174 103 190 chr2 75363641 75363894 -177892689 + MIR SINE MIR 13 243 -19 1313 213 118 0 chr2 75364115 75364420 -177892163 - MER58B DNA MER1_type 0 341 1 241 383 96 33 chr2 75365421 75365517 -177891066 - L2 LINE L2 -90 3182 3093 333 0 0 0 chr2 75365517 75365554 -177891029 + (TG)n Simple_repeat Simple_repeat 1 37 0 241 383 96 33 chr2 75365554 75365791 -177890792 - L2 LINE L2 -179 3093 2828 206 303 77 26 chr2 75365893 75366048 -177890535 - L2 LINE L2 -755 2559 2397 3422 186 6 53 chr2 75366074 75366748 -177889835 - MER82 DNA MER2_type -10 643 2 561 255 156 41 chr2 75367019 75367262 -177889321 + L2 LINE L2 3024 3294 -19 23 33 0 0 chr2 75367275 75367305 -177889278 + AT_rich Low_complexity Low_complexity 1 30 0 1278 183 35 123 chr2 75368033 75368433 -177888150 + MLT1A1 LTR MaLR 1 365 0 2245 83 0 7 chr2 75368739 75369029 -177887554 - AluSc SINE Alu -21 288 1 29 0 0 0 chr2 75369281 75369310 -177887273 + AT_rich Low_complexity Low_complexity 1 29 0 2490 45 0 10 chr2 75370530 75370839 -177885744 + AluY SINE Alu 1 306 -5 189 0 0 0 chr2 75371184 75371205 -177885378 + (A)n Simple_repeat Simple_repeat 1 21 0 419 106 0 0 chr2 75371547 75371613 -177884970 + L1PA13 LINE L1 6095 6160 -3 1315 106 0 0 chr2 75371613 75371800 -177884783 + L1MA1 LINE L1 6114 6302 0 21 0 0 0 chr2 75372281 75372302 -177884281 + AT_rich Low_complexity Low_complexity 1 21 0 1040 205 24 101 chr2 75373863 75374239 -177882344 - L1MD1 LINE L1 -1 6635 6289 629 125 0 0 chr2 75374220 75374316 -177882267 - L1MA1 LINE L1 -97 6205 6110 * 7732 229 75 44 chr2 75374330 75376667 -177879916 - L1MD1 LINE L1 -334 6302 3779 852 146 0 0 chr2 75376667 75376797 -177879786 - FLAM_C SINE Alu -3 130 1 7732 229 75 44 chr2 75376797 75378464 -177878119 - L1MD1 LINE L1 -2857 3779 2165 652 262 38 0 chr2 75378482 75378665 -177877918 + L1ME2 LINE L1 2646 2835 -3311 448 228 151 58 chr2 75378670 75378738 -177877845 + L1ME2 LINE L1 5639 5699 -465 2311 96 0 6 chr2 75378738 75379050 -177877533 + AluSg SINE Alu 1 310 0 448 228 151 58 chr2 75379050 75379187 -177877396 + L1ME2 LINE L1 5699 5863 -301 307 256 151 66 chr2 75379248 75379553 -177877030 + L1ME LINE L1 5349 5679 -442 2337 76 0 13 chr2 75379562 75379876 -177876707 + AluSg SINE Alu 1 310 0 2096 114 14 3 chr2 75382625 75382922 -177873661 + AluSp SINE Alu 1 300 -13 292 258 66 39 chr2 75383877 75384059 -177872524 - L1M4 LINE L1 -1549 4597 4411 1550 133 6 98 chr2 75384356 75384673 -177871910 + AluJb SINE Alu 1 288 -24 1532 142 68 36 chr2 75385008 75385289 -177871294 - AluJo SINE Alu -14 298 9 1113 176 105 46 chr2 75385366 75385672 -177870911 - MER33 DNA MER1_type 0 324 1 220 236 0 36 chr2 75385724 75385779 -177870804 + L2 LINE L2 3261 3313 0 201 195 0 0 chr2 75386765 75386806 -177869777 + (TG)n Simple_repeat Simple_repeat 2 42 0 4351 20 4 0 chr2 75386831 75387338 -177869245 - L1PA3 LINE L1 0 6155 5647 910 228 83 35 chr2 75387345 75387683 -177868900 - L1MC4 LINE L1 0 8042 7689 700 297 57 0 chr2 75387717 75387926 -177868657 + MER58A DNA MER1_type 1 221 -3 393 195 35 0 chr2 75387939 75388026 -177868557 - L1MC4 LINE L1 -390 7652 7563 2704 79 3 6 chr2 75388026 75388382 -177868201 + THE1A LTR MaLR 1 355 0 281 194 0 14 chr2 75388398 75388470 -177868113 + CT-rich Low_complexity Low_complexity 2 72 0 212 333 0 25 chr2 75388813 75388894 -177867689 - MIR SINE MIR -36 226 148 722 168 0 0 chr2 75388895 75389008 -177867575 - FLAM_C SINE Alu -30 113 1 210 143 0 0 chr2 75389219 75389261 -177867322 - L2 LINE L2 0 3313 3272 319 340 125 42 chr2 75390106 75390394 -177866189 - L2 LINE L2 -339 2975 2664 22 0 0 0 chr2 75392110 75392132 -177864451 + AT_rich Low_complexity Low_complexity 1 22 0 2011 116 25 0 chr2 75393201 75393485 -177863098 + AluSx SINE Alu 1 291 -21 230 246 0 0 chr2 75394388 75394449 -177862134 - L1ME3A LINE L1 -1 6169 6109 337 282 77 51 chr2 75395695 75395812 -177860771 - L2 LINE L2 -12 3260 3141 812 76 0 0 chr2 75395961 75396066 -177860517 + AluY SINE Alu 197 301 -10 600 344 139 31 chr2 75396255 75397017 -177859566 - L2 LINE L2 -540 2774 1931 26 74 0 0 chr2 75397178 75397232 -177859351 + AT_rich Low_complexity Low_complexity 1 54 0 607 101 0 0 chr2 75397943 75398032 -177858551 - Alu SINE Alu -2 308 220 2248 69 0 4 chr2 75398254 75398529 -177858054 - AluSc SINE Alu -34 275 2 2369 14 42 14 chr2 75398544 75398830 -177857753 - AluY SINE Alu -17 294 1 354 261 67 60 chr2 75399104 75399238 -177857345 - L2 LINE L2 0 3313 3179 832 294 87 39 chr2 75399461 75400257 -177856326 + L1M4 LINE L1 3543 4376 -1770 408 289 35 5 chr2 75400339 75400540 -177856043 + L1M4 LINE L1 4496 4702 -1444 4133 116 19 6 chr2 75400754 75401384 -177855199 + HSMAR2 DNA Mariner 1 638 -664 1519 132 78 81 chr2 75401385 75401733 -177854850 + THE1C LTR MaLR 1 347 -28 293 65 22 0 chr2 75401790 75401836 -177854747 - L1PA6 LINE L1 0 6154 6108 738 188 208 12 chr2 75402034 75402279 -177854304 + Charlie1 DNA MER1_type 2469 2761 0 1834 144 0 20 chr2 75402743 75403048 -177853535 + AluSx SINE Alu 1 299 -13 985 267 0 8 chr2 75403103 75403365 -177853218 + AluJb SINE Alu 13 272 -40 22 35 0 0 chr2 75404113 75404142 -177852441 + AT_rich Low_complexity Low_complexity 1 29 0 286 299 11 23 chr2 75405357 75405444 -177851139 - MLT1K LTR MaLR -347 241 156 356 113 145 0 chr2 75405729 75405791 -177850792 - MER92C LTR ERV1 0 554 484 478 222 19 86 chr2 75405852 75405946 -177850637 - MER92B LTR ERV1 -485 151 70 2085 121 3 0 chr2 75405946 75406255 -177850328 - AluSq SINE Alu 0 310 1 478 222 19 86 chr2 75406255 75406321 -177850262 - MER92B LTR ERV1 -566 70 1 1902 128 33 10 chr2 75406527 75406831 -177849752 + AluSx SINE Alu 1 311 -1 826 113 8 8 chr2 75406831 75406955 -177849628 + THE1-int LTR MaLR 848 971 -609 564 15 0 0 chr2 75407061 75407126 -177849457 + (GA)n Simple_repeat Simple_repeat 2 66 0 1761 166 4 0 chr2 75407126 75407403 -177849180 - AluJb SINE Alu -34 278 1 451 308 101 51 chr2 75407726 75408259 -177848324 + L1ME4a LINE L1 5305 5864 -257 1337 197 67 3 chr2 75408287 75408571 -177848012 - AluJb SINE Alu -6 306 5 180 0 0 0 chr2 75408902 75408922 -177847661 + (TTG)n Simple_repeat Simple_repeat 1 20 0 180 0 0 0 chr2 75408951 75408971 -177847612 + (TTG)n Simple_repeat Simple_repeat 1 20 0 189 171 0 0 chr2 75409000 75409035 -177847548 + (CTG)n Simple_repeat Simple_repeat 1 35 0 381 251 34 117 chr2 75409119 75409298 -177847285 + MIR SINE MIR 63 226 -36 206 353 60 68 chr2 75409510 75409776 -177846807 - L2 LINE L2 -189 3083 2820 372 339 0 0 chr2 75409786 75409907 -177846676 + MER58 DNA MER1_type 6 126 -89 322 190 17 0 chr2 75409912 75409970 -177846613 + L1MDa LINE L1 27 85 -6455 * 579 253 42 32 chr2 75409945 75410135 -177846448 + L1MDa LINE L1 368 559 -5981 4126 222 56 51 chr2 75410162 75411540 -177845043 + L1M4 LINE L1 2495 3879 -2267 1062 207 29 41 chr2 75411576 75411822 -177844761 + AluJo SINE Alu 43 285 -27 670 134 17 28 chr2 75411871 75412050 -177844533 + GA-rich Low_complexity Low_complexity 1 177 0 455 190 0 13 chr2 75412051 75412130 -177844453 + polypurine Low_complexity Low_complexity 3 80 0 1194 259 59 20 chr2 75412174 75412665 -177843918 + L1M4 LINE L1 3877 4386 -1760 27 62 0 0 chr2 75415063 75415111 -177841472 + AT_rich Low_complexity Low_complexity 1 48 0 264 336 29 19 chr2 75415578 75415682 -177840901 + L1MDa LINE L1 978 1082 -5448 497 206 0 22 chr2 75415707 75415799 -177840784 + MER21B LTR ERV1 1 90 -773 2247 261 61 44 chr2 75415821 75416596 -177839987 + MER21B LTR ERV1 19 806 -57 720 243 59 79 chr2 75416773 75417028 -177839555 + L1M4 LINE L1 3289 3537 -2609 1506 196 4 11 chr2 75417028 75417334 -177839249 - AluJo SINE Alu 0 312 9 720 243 59 79 chr2 75417334 75417467 -177839116 + L1M4 LINE L1 3537 3671 -2475 248 361 41 8 chr2 75417730 75417852 -177838731 + L2 LINE L2 3188 3313 0 2157 112 0 7 chr2 75418037 75418322 -177838261 + AluSx SINE Alu 2 284 -28 315 65 0 0 chr2 75418322 75418368 -177838215 + (TA)n Simple_repeat Simple_repeat 2 47 0 51 31 0 0 chr2 75418427 75418492 -177838091 + AT_rich Low_complexity Low_complexity 1 65 0 337 268 145 41 chr2 75418770 75419185 -177837398 + HAL1b LINE L1 65 522 -826 1906 236 184 41 chr2 75419213 75420025 -177836558 + L1MCb LINE L1 6 933 -5112 271 254 45 0 chr2 75420053 75420120 -177836463 - L1MB5 LINE L1 -84 6090 6021 677 174 43 7 chr2 75420130 75420268 -177836315 + L1MB5 LINE L1 6030 6172 -2 378 179 19 70 chr2 75420310 75420466 -177836117 + L1MCb LINE L1 2187 2334 -4230 21 36 0 0 chr2 75420658 75420686 -177835897 + AT_rich Low_complexity Low_complexity 1 28 0 281 154 138 0 chr2 75420686 75420751 -177835832 + L2 LINE L2 2737 2810 -504 437 273 31 47 chr2 75420752 75420880 -177835703 - MER5B DNA MER1_type -1 177 52 316 270 0 34 chr2 75421070 75421159 -177835424 + MLT1K LTR MaLR 322 407 -181 282 51 85 0 chr2 75421280 75421339 -177835244 + T-rich Low_complexity Low_complexity 2 65 0 184 363 10 20 chr2 75421610 75421712 -177834871 + L3 LINE CR1 1476 1576 -1 1784 85 119 4 chr2 75422100 75422360 -177834223 + AluSg1 SINE Alu 1 290 -19 1892 160 0 3 chr2 75423061 75423349 -177833234 + AluJb SINE Alu 1 287 -25 186 133 0 0 chr2 75423678 75423708 -177832875 + (GAA)n Simple_repeat Simple_repeat 2 31 0 693 161 8 8 chr2 75424800 75424918 -177831665 + AluJb SINE Alu 1 118 -194 21 36 0 0 chr2 75424918 75424946 -177831637 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr2 75425555 75425581 -177831002 + AT_rich Low_complexity Low_complexity 1 26 0 1792 182 3 0 chr2 75425976 75426278 -177830305 + AluSx SINE Alu 1 303 -9 2102 129 0 7 chr2 75426625 75426920 -177829663 - AluSx SINE Alu -19 293 1 841 227 154 7 chr2 75427435 75427778 -177828805 + L1MC4 LINE L1 7646 7995 0 728 243 36 59 chr2 75427780 75428002 -177828581 + MIR SINE MIR 25 241 -21 2067 136 3 0 chr2 75428009 75428310 -177828273 + AluSx SINE Alu 1 302 -10 210 329 26 0 chr2 75428788 75428864 -177827719 + L2 LINE L2 2946 3023 -249 720 372 72 19 chr2 75430994 75431424 -177825159 + L1PA13 LINE L1 1 453 -6334 1271 64 17 6 chr2 75431760 75431933 -177824650 + L1PA11 LINE L1 5996 6170 -4 46 33 0 0 chr2 75431933 75431993 -177824590 + AT_rich Low_complexity Low_complexity 1 60 0 5193 122 55 7 chr2 75431993 75433103 -177823480 + L1PA16 LINE L1 5004 6157 -9 213 186 114 43 chr2 75433718 75433788 -177822795 + MER5A DNA MER1_type 72 146 -43 920 226 100 51 chr2 75433796 75433903 -177822680 + L1ME3A LINE L1 5259 5359 -811 1901 141 13 10 chr2 75433903 75434201 -177822382 + AluJb SINE Alu 1 299 -13 920 226 100 51 chr2 75434201 75434443 -177822140 + L1ME3A LINE L1 5359 5625 -545 611 242 81 5 chr2 75434442 75434628 -177821955 + L1ME3A LINE L1 5966 6165 -5 * 217 322 59 17 chr2 75434662 75434780 -177821803 + L2 LINE L2 2140 2262 -1052 1252 143 174 19 chr2 75435610 75435869 -177820714 - AluJo SINE Alu -12 300 2 1496 196 7 25 chr2 75435932 75436217 -177820366 + AluJo SINE Alu 3 282 -30 400 335 193 0 chr2 75436237 75436434 -177820149 - MIR SINE MIR 0 262 28 677 203 45 0 chr2 75436554 75436687 -177819896 - FLAM_C SINE Alu -4 139 1 309 159 0 0 chr2 75436700 75436763 -177819820 + (TA)n Simple_repeat Simple_repeat 1 63 0 217 338 38 0 chr2 75437891 75437971 -177818612 + L3b LINE CR1 1493 1575 -8 21 82 0 0 chr2 75439000 75439049 -177817534 + AT_rich Low_complexity Low_complexity 1 49 0 548 226 0 0 chr2 75439261 75439363 -177817220 - FLAM_A SINE Alu -40 102 1 25 0 0 0 chr2 75439522 75439547 -177817036 + AT_rich Low_complexity Low_complexity 1 25 0 1785 161 3 17 chr2 75439608 75439900 -177816683 - AluJo SINE Alu -24 288 1 1593 185 25 24 chr2 75439964 75440326 -177816257 + MLT1A1 LTR MaLR 2 365 0 575 348 167 26 chr2 75440424 75441178 -177815405 - L3 LINE CR1 -237 1340 481 231 335 106 24 chr2 75441267 75441437 -177815146 + L2 LINE L2 2903 3086 -186 244 254 100 9 chr2 75441641 75441751 -177814832 + L2 LINE L2 96 215 -3099 376 331 7 20 chr2 75441777 75441925 -177814658 + Charlie8 DNA MER1_type 84 229 -2188 321 197 0 0 chr2 75442663 75442729 -177813854 + (TA)n Simple_repeat Simple_repeat 2 67 0 294 95 0 0 chr2 75442867 75442909 -177813674 + (TG)n Simple_repeat Simple_repeat 2 43 0 1539 83 5 0 chr2 75443072 75443265 -177813318 - AluSp SINE Alu -119 194 1 2023 121 0 23 chr2 75443340 75443647 -177812936 - AluSx SINE Alu -12 300 1 270 81 0 0 chr2 75443673 75443710 -177812873 + (T)n Simple_repeat Simple_repeat 1 37 0 438 306 135 18 chr2 75443727 75443897 -177812686 + MLT1J LTR MaLR 248 437 -74 28 0 0 0 chr2 75444121 75444149 -177812434 + AT_rich Low_complexity Low_complexity 1 28 0 216 0 0 0 chr2 75444402 75444426 -177812157 + (A)n Simple_repeat Simple_repeat 1 24 0 314 357 76 36 chr2 75446848 75447072 -177809511 + L1MDa LINE L1 118 350 -6190 1848 227 99 104 chr2 75447348 75448862 -177807721 + L1MD3 LINE L1 4130 5014 -1132 1810 110 73 7 chr2 75448862 75449134 -177807449 - AluSc SINE Alu -19 290 1 1848 227 99 104 chr2 75449134 75449521 -177807062 + L1MD3 LINE L1 5014 5402 -744 513 204 92 0 chr2 75449586 75449728 -177806855 + L1M4 LINE L1 2856 3010 -3136 2217 162 27 10 chr2 75449728 75450142 -177806441 + L1MC2 LINE L1 5907 6327 -17 622 200 35 48 chr2 75450144 75450289 -177806294 + AluJo SINE Alu 3 145 -167 1379 330 35 40 chr2 75450295 75450952 -177805631 + L1P4 LINE L1 788 1441 -6133 341 335 6 14 chr2 75450934 75451150 -177805433 + L1P4 LINE L1 2083 2306 -5268 * 3510 226 39 6 chr2 75451378 75452574 -177804009 + L1P4 LINE L1 2984 4239 -3345 * 5686 189 29 12 chr2 75452572 75452896 -177803687 + L1P4 LINE L1 5507 5824 -1780 387 0 0 0 chr2 75452896 75452939 -177803644 + (CA)n Simple_repeat Simple_repeat 2 44 0 5686 189 29 12 chr2 75452939 75452980 -177803603 + L1P4 LINE L1 5824 5863 -1741 2044 121 3 3 chr2 75452980 75453278 -177803305 - AluY SINE Alu -13 298 1 5686 189 29 12 chr2 75453278 75454279 -177802304 + L1P4 LINE L1 5863 6892 -712 250 139 0 0 chr2 75454267 75454310 -177802273 + L1PA16 LINE L1 2823 2865 -3984 * 4279 166 0 3 chr2 75454311 75455053 -177801530 + L1PA16 LINE L1 6128 6867 -2 866 224 0 0 chr2 75455055 75455207 -177801376 + AluJo SINE Alu 137 288 -24 26 0 0 0 chr2 75455207 75455233 -177801350 + AT_rich Low_complexity Low_complexity 1 26 0 2032 245 61 30 chr2 75455846 75456536 -177800047 + MER20B DNA MER1_type 70 780 -3 332 330 108 30 chr2 75456550 75456753 -177799830 + L2 LINE L2 2595 2813 -501 902 252 90 45 chr2 75456792 75457125 -177799458 + L2 LINE L2 1987 2334 -980 2767 148 21 66 chr2 75457125 75457527 -177799056 + L1M1 LINE L1 4987 5330 -970 2062 108 13 19 chr2 75457527 75458025 -177798558 + AluSq SINE Alu 1 313 0 2767 148 21 66 chr2 75458025 75458463 -177798120 + L1M1 LINE L1 5330 5786 -514 569 296 29 29 chr2 75458695 75459003 -177797580 + L1 LINE L1 3197 3504 -2642 7038 205 51 29 chr2 75459016 75461323 -177795260 + L1PA13 LINE L1 1 2470 -4327 249 56 56 0 chr2 75461318 75461354 -177795229 - L1P LINE L1 -4290 1856 1819 * 37506 89 12 16 chr2 75461369 75462778 -177793805 + L1PA3 LINE L1 662 2075 -4730 7677 16 7 0 chr2 75462778 75464405 -177792178 + L1PA3 LINE L1 5174 6806 0 37506 89 12 16 chr2 75464405 75464431 -177792152 + L1PA3 LINE L1 2075 2100 -4705 252 77 0 0 chr2 75464431 75464470 -177792113 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 37506 89 12 16 chr2 75464470 75469227 -177787356 + L1PA3 LINE L1 2100 6459 -346 3521 118 26 24 chr2 75469227 75469492 -177787091 + L1MA3 LINE L1 5686 5949 -356 1728 161 17 20 chr2 75469492 75469791 -177786792 + AluJo SINE Alu 1 298 -14 3521 118 26 24 chr2 75469791 75470138 -177786445 + L1MA3 LINE L1 5949 6303 -2 28 61 0 0 chr2 75470166 75470215 -177786368 + AT_rich Low_complexity Low_complexity 1 49 0 1302 204 71 21 chr2 75470215 75470597 -177785986 + L1MC/D LINE L1 4643 5043 -1103 2015 154 15 0 chr2 75470597 75470929 -177785654 + MER1B DNA MER1_type 1 337 0 2161 96 23 0 chr2 75470950 75471253 -177785330 + AluY SINE Alu 1 310 -1 687 246 81 4 chr2 75471264 75471529 -177785054 + L1MC/D LINE L1 5297 5598 -644 467 141 94 24 chr2 75471537 75471622 -177784961 + FRAM SINE Alu 67 157 -19 388 344 119 9 chr2 75471725 75471943 -177784640 - MIR SINE MIR -19 243 2 402 118 66 13 chr2 75472134 75472210 -177784373 - MADE1 DNA Mariner 0 80 1 1501 59 102 76 chr2 75472262 75472498 -177784085 - AluY SINE Alu -24 287 46 303 220 52 12 chr2 75473288 75473461 -177783122 + (TA)n Simple_repeat Simple_repeat 1 180 0 664 174 0 0 chr2 75473496 75473605 -177782978 + AluJb SINE Alu 3 111 -201 28 0 0 0 chr2 75473607 75473635 -177782948 + AT_rich Low_complexity Low_complexity 1 28 0 4322 22 0 0 chr2 75473696 75474197 -177782386 + L1PA3 LINE L1 5652 6152 -3 24 0 0 0 chr2 75474197 75474221 -177782362 + AT_rich Low_complexity Low_complexity 1 24 0 2368 64 0 3 chr2 75474592 75474888 -177781695 - AluY SINE Alu -4 307 13 24 53 0 0 chr2 75475946 75475984 -177780599 + AT_rich Low_complexity Low_complexity 1 38 0 340 209 121 25 chr2 75475997 75476139 -177780444 + L1M2 LINE L1 397 1829 -825 322 319 31 43 chr2 75476212 75476375 -177780208 + HAL1b LINE L1 601 761 -587 9056 235 58 29 chr2 75476799 75479578 -177777005 + L1MC2 LINE L1 2031 4729 -1684 1772 166 0 10 chr2 75479578 75479886 -177776697 + AluJb SINE Alu 1 305 -7 9056 235 58 29 chr2 75479886 75480534 -177776049 + L1MC2 LINE L1 4729 5357 -1056 564 15 0 0 chr2 75480534 75480599 -177775984 + (TG)n Simple_repeat Simple_repeat 2 66 0 2299 83 0 10 chr2 75480604 75480906 -177775677 - AluY SINE Alu -12 299 1 9056 235 58 29 chr2 75480906 75481454 -177775129 + L1MC2 LINE L1 5360 6080 -333 286 267 163 15 chr2 75481496 75481631 -177774952 - L2 LINE L2 -1886 1428 1274 180 97 0 0 chr2 75482494 75482525 -177774058 + (T)n Simple_repeat Simple_repeat 1 31 0 490 329 43 24 chr2 75483833 75484043 -177772540 - MIR SINE MIR -3 259 46 21 0 0 0 chr2 75484121 75484142 -177772441 + AT_rich Low_complexity Low_complexity 1 21 0 2152 99 30 10 chr2 75484432 75484736 -177771847 + AluSg SINE Alu 1 310 0 407 212 0 12 chr2 75485910 75485995 -177770588 + FLAM SINE Alu 44 127 -16 1819 136 66 0 chr2 75486044 75486330 -177770253 - AluSx SINE Alu -7 305 1 831 209 80 40 chr2 75486669 75486894 -177769689 + MSTD LTR MaLR 163 396 0 564 276 25 25 chr2 75488596 75488879 -177767704 + L1ME LINE L1 758 1040 -5165 404 15 0 73 chr2 75488882 75488950 -177767633 + SVA Other Other 1324 1386 0 684 284 48 62 chr2 75489057 75489553 -177767030 + L1ME LINE L1 1241 1729 -4667 227 83 28 0 chr2 75489729 75489765 -177766818 + MADE1 DNA Mariner 44 80 0 3103 219 97 57 chr2 75489766 75490500 -177766083 + L1MC3 LINE L1 6675 7465 -320 1829 126 31 7 chr2 75490500 75490794 -177765789 + AluSx SINE Alu 1 301 -11 3103 219 97 57 chr2 75490794 75491098 -177765485 + L1MC3 LINE L1 7465 7755 -30 207 0 0 0 chr2 75491120 75491143 -177765440 + (TAAA)n Simple_repeat Simple_repeat 4 26 0 365 266 84 44 chr2 75491149 75491375 -177765208 + L1ME4a LINE L1 5741 5975 -146 1826 129 28 3 chr2 75491420 75491706 -177764877 + AluSx SINE Alu 1 293 -19 234 289 0 13 chr2 75491816 75491892 -177764691 + MLT1L LTR MaLR 1 75 -540 356 241 41 73 chr2 75492049 75492260 -177764323 + MLT1J LTR MaLR 303 584 -31 24 53 0 0 chr2 75492824 75492862 -177763721 + AT_rich Low_complexity Low_complexity 1 38 0 1078 194 124 21 chr2 75493238 75493549 -177763034 + MER58B DNA MER1_type 3 341 0 24 0 0 0 chr2 75494676 75494700 -177761883 + AT_rich Low_complexity Low_complexity 1 24 0 877 201 6 6 chr2 75494792 75494971 -177761612 - MER57A LTR ERV1 0 403 225 2586 148 66 33 chr2 75494975 75495517 -177761066 + Tigger3b DNA MER2_type 133 692 -539 1977 158 38 10 chr2 75495517 75495909 -177760674 + L1M3 LINE L1 4446 4848 -1298 1725 107 29 32 chr2 75495919 75496200 -177760383 - THE1B LTR MaLR -84 280 1 2283 87 6 3 chr2 75496200 75496512 -177760071 - THE1B-int LTR MaLR 0 1580 1268 6728 42 1 8 chr2 75496665 75497512 -177759071 - L1PA6 LINE L1 -33 6121 5281 1984 113 4 0 chr2 75497563 75497828 -177758755 - AluSq SINE Alu -47 266 1 232 157 0 59 chr2 75497828 75497871 -177758712 + MSTA LTR MaLR 387 428 0 4410 132 18 0 chr2 75497872 75498525 -177758058 + HSMAR2 DNA Mariner 636 1300 -2 293 259 14 85 chr2 75498788 75499000 -177757583 + L1M3 LINE L1 5254 5450 -721 2453 95 0 27 chr2 75499320 75499688 -177756895 + L1PA14 LINE L1 5786 6143 -18 309 246 28 78 chr2 75499754 75499896 -177756687 + L1ME4a LINE L1 5980 6114 -7 281 228 33 22 chr2 75500145 75500237 -177756346 + GA-rich Low_complexity Low_complexity 1 93 0 2250 95 7 0 chr2 75500373 75500668 -177755915 + AluSp SINE Alu 3 299 -14 182 311 33 33 chr2 75502061 75502122 -177754461 + MIR SINE MIR 40 100 -108 2083 131 3 3 chr2 75506951 75507257 -177749326 + AluJb SINE Alu 1 306 -6 1513 230 37 29 chr2 75507453 75507861 -177748722 + L1MC4 LINE L1 5256 5666 -2142 2780 213 40 32 chr2 75507898 75508615 -177747968 - L1ME1 LINE L1 0 6166 5444 615 250 163 28 chr2 75508626 75510426 -177746157 + L1MC4 LINE L1 5711 7918 -124 239 337 71 27 chr2 75511129 75511313 -177745270 - Charlie8 DNA MER1_type -1887 530 339 525 261 42 7 chr2 75511390 75511532 -177745051 - Charlie8 DNA MER1_type -2270 147 1 252 297 0 14 chr2 75511730 75511804 -177744779 - MIR SINE MIR -109 153 81 1670 180 52 46 chr2 75511876 75512264 -177744319 + MLT1B LTR MaLR 1 390 0 315 317 8 17 chr2 75512786 75512906 -177743677 - MIR SINE MIR 0 262 144 817 129 0 17 chr2 75513149 75513265 -177743318 + AluJb SINE Alu 1 114 -198 23 0 0 0 chr2 75513907 75513930 -177742653 + AT_rich Low_complexity Low_complexity 1 23 0 430 276 167 6 chr2 75514113 75514269 -177742314 + MER5A DNA MER1_type 9 189 0 2198 88 14 3 chr2 75515715 75516011 -177740572 + AluY SINE Alu 1 299 -12 240 363 66 0 chr2 75516275 75516366 -177740217 - MIR SINE MIR -89 173 77 21 0 0 0 chr2 75516555 75516576 -177740007 + AT_rich Low_complexity Low_complexity 1 21 0 285 277 62 0 chr2 75516578 75516643 -177739940 - MIR SINE MIR -186 76 8 183 80 0 0 chr2 75517600 75517625 -177738958 + (GAAA)n Simple_repeat Simple_repeat 4 28 0 322 321 176 6 chr2 75518308 75518473 -177738110 - MIR3 SINE MIR 0 208 16 514 226 36 15 chr2 75518524 75518661 -177737922 - MER103 DNA DNA -7 159 20 30 27 0 0 chr2 75519536 75519573 -177737010 + AT_rich Low_complexity Low_complexity 1 37 0 292 285 62 42 chr2 75520475 75520619 -177735964 - L2 LINE L2 -9 3304 3158 360 230 159 24 chr2 75521800 75521926 -177734657 + MIR SINE MIR 65 207 -55 2307 98 7 3 chr2 75522017 75522324 -177734259 - AluSx SINE Alu -4 308 1 2856 177 32 50 chr2 75523490 75524106 -177732477 + L1PA16 LINE L1 1107 1711 -5138 1340 196 20 49 chr2 75524106 75524412 -177732171 + AluSx SINE Alu 1 297 -15 810 90 0 0 chr2 75524420 75524520 -177732063 - AluSp/q SINE Alu -18 295 196 1012 127 0 0 chr2 75524522 75524672 -177731911 + L1PA16 LINE L1 1705 1854 -4995 241 169 92 31 chr2 75524681 75524746 -177731837 - L1PA15-16 LINE L1 -5496 1353 1285 6002 203 36 31 chr2 75524758 75525592 -177730991 + L1PA16 LINE L1 1856 2684 -4165 2145 119 6 6 chr2 75525592 75525903 -177730680 - AluSx SINE Alu -1 311 1 6002 203 36 31 chr2 75525903 75527196 -177729387 + L1PA16 LINE L1 2684 3995 -2854 2032 115 42 0 chr2 75527196 75527483 -177729100 + AluSx SINE Alu 1 299 -13 6002 203 36 31 chr2 75527483 75527783 -177728800 + L1PA16 LINE L1 3995 4292 -2557 5944 131 20 29 chr2 75527763 75528351 -177728232 + L1PA16 LINE L1 5478 6070 -799 * 2345 94 0 3 chr2 75528351 75528660 -177727923 + AluSc SINE Alu 1 308 -1 5944 131 20 29 chr2 75528660 75529452 -177727131 + L1PA16 LINE L1 6070 6860 -9 4028 185 22 22 chr2 75529547 75530527 -177726056 + L1MB2 LINE L1 5127 6115 -56 35 24 0 0 chr2 75530544 75530586 -177725997 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr2 75530627 75530648 -177725935 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 75531815 75531838 -177724745 + AT_rich Low_complexity Low_complexity 1 23 0 2072 109 18 3 chr2 75532123 75532408 -177724175 - AluSx SINE Alu -23 289 1 2620 179 92 20 chr2 75532476 75533074 -177723509 + L1ME2 LINE L1 5431 6071 -93 343 243 31 72 chr2 75533206 75533428 -177723155 + L1MC4 LINE L1 7829 8041 -1 2274 82 7 0 chr2 75535040 75535334 -177721249 + AluY SINE Alu 1 296 -15 1281 279 124 51 chr2 75535569 75536269 -177720314 + HAL1 LINE L1 1 751 -1756 1316 243 71 71 chr2 75536409 75536899 -177719684 - LTR16C LTR ERVL 0 491 2 1909 196 56 31 chr2 75538996 75539159 -177717424 + MLT1C LTR MaLR 6 164 -303 771 171 0 0 chr2 75539159 75539276 -177717307 + FLAM_C SINE Alu 2 118 -15 188 35 35 0 chr2 75539281 75539310 -177717273 + (TAAAA)n Simple_repeat Simple_repeat 1 30 0 1909 196 56 31 chr2 75539310 75539589 -177716994 + MLT1C LTR MaLR 167 465 -2 2071 123 0 7 chr2 75539863 75540165 -177716418 - AluSq SINE Alu -13 300 1 255 164 33 0 chr2 75540171 75540232 -177716351 + L2 LINE L2 3107 3169 -144 2419 77 0 0 chr2 75540533 75540832 -177715751 - AluY SINE Alu -12 299 1 590 100 0 0 chr2 75541473 75541553 -177715030 - AluY SINE Alu -14 297 218 1992 139 7 7 chr2 75542349 75542651 -177713932 + AluSx SINE Alu 5 306 -6 828 280 99 26 chr2 75544190 75544572 -177712011 + Charlie7 DNA MER1_type 86 495 -2117 846 248 46 58 chr2 75544616 75545080 -177711503 + MLT1H LTR MaLR 37 549 0 622 228 71 11 chr2 75545080 75545264 -177711319 + Charlie7 DNA MER1_type 495 689 -1923 189 182 0 0 chr2 75545284 75545339 -177711244 + (CATATA)n Simple_repeat Simple_repeat 5 59 0 1692 179 7 0 chr2 75545594 75545868 -177710715 + AluJb SINE Alu 6 281 -31 2397 85 0 3 chr2 75547383 75547688 -177708895 + AluSg1 SINE Alu 1 304 -5 1300 171 0 5 chr2 75548077 75548288 -177708295 + MER2 DNA MER2_type 1 210 -135 315 0 0 0 chr2 75548423 75548458 -177708125 + (CA)n Simple_repeat Simple_repeat 2 36 0 902 129 0 67 chr2 75548739 75548867 -177707716 + L1MB3 LINE L1 6016 6130 -53 1877 108 89 0 chr2 75548867 75549136 -177707447 + AluSq SINE Alu 1 293 -20 902 129 0 67 chr2 75549136 75549185 -177707398 + L1MB3 LINE L1 6130 6181 -2 2073 107 7 7 chr2 75549247 75549536 -177707047 + AluSc SINE Alu 1 289 -20 21 0 0 0 chr2 75549686 75549707 -177706876 + AT_rich Low_complexity Low_complexity 1 21 0 331 316 168 31 chr2 75550040 75550331 -177706252 - L1 LINE L1 -1172 4974 4644 859 105 0 8 chr2 75550610 75550734 -177705849 + AluSc SINE Alu 175 297 -12 10933 19 1 1 chr2 75551295 75553340 -177703243 - L1PA2 LINE L1 0 6155 4111 12231 26 2 0 chr2 75553340 75554821 -177701762 + L1PA2 LINE L1 2627 4110 -2036 195 162 0 0 chr2 75555071 75555108 -177701475 + (CA)n Simple_repeat Simple_repeat 1 37 0 1181 148 5 29 chr2 75555751 75555961 -177700622 - AluJo SINE Alu -21 291 87 1165 246 147 48 chr2 75556111 75556608 -177699975 + MLT1H1 LTR MaLR 10 555 0 316 306 71 41 chr2 75556714 75556780 -177699803 + L2 LINE L2 3112 3175 -138 2432 86 0 0 chr2 75556780 75557083 -177699500 - AluSg SINE Alu -7 303 1 316 306 71 41 chr2 75557083 75557212 -177699371 + L2 LINE L2 3175 3313 0 26 50 0 0 chr2 75557410 75557450 -177699133 + AT_rich Low_complexity Low_complexity 1 40 0 536 226 24 0 chr2 75557746 75557870 -177698713 - L1ME1 LINE L1 -17 6149 6023 * 826 244 38 34 chr2 75557865 75558103 -177698480 + L1ME1 LINE L1 5911 6149 -17 1567 162 3 49 chr2 75558120 75558404 -177698179 - AluJo SINE Alu -31 281 11 26 0 0 0 chr2 75558413 75558439 -177698144 + AT_rich Low_complexity Low_complexity 1 26 0 454 91 0 30 chr2 75559423 75559489 -177697094 - AluY SINE Alu -159 152 89 2683 148 73 41 chr2 75560848 75561381 -177695202 - MER44D DNA MER2_type 0 605 1 1662 221 21 77 chr2 75561626 75562194 -177694389 - MLT1E3 LTR MaLR 0 624 1 1742 39 0 0 chr2 75562803 75563011 -177693572 - L1PA3 LINE L1 0 6155 5948 812 214 122 10 chr2 75563216 75563412 -177693171 + MLT1J2 LTR MaLR 1 218 -232 1596 98 158 4 chr2 75564357 75564603 -177691980 + AluSg1 SINE Alu 2 285 -24 215 125 56 0 chr2 75564798 75564870 -177691713 + (TA)n Simple_repeat Simple_repeat 2 77 0 997 263 116 20 chr2 75565358 75565704 -177690879 + MLT1J2 LTR MaLR 1 379 -71 190 222 0 0 chr2 75565732 75565768 -177690815 - L2 LINE L2 -14 3299 3264 363 316 34 8 chr2 75566023 75566140 -177690443 + MIR3 SINE MIR 47 166 -42 1701 180 40 0 chr2 75567947 75568247 -177688336 + AluSx SINE Alu 1 312 0 309 224 141 94 chr2 75568314 75568594 -177687989 + L1M4b LINE L1 20 627 -6228 22 0 0 0 chr2 75568648 75568670 -177687913 + AT_rich Low_complexity Low_complexity 1 22 0 398 281 73 79 chr2 75568710 75569066 -177687517 + L1M4b LINE L1 830 1183 -5672 1795 253 69 37 chr2 75569066 75569837 -177686746 + L1M4b LINE L1 2366 3170 -3968 1695 186 10 16 chr2 75569837 75570149 -177686434 + AluJb SINE Alu 1 310 -2 1795 253 69 37 chr2 75570149 75570249 -177686334 + L1M4b LINE L1 3170 3265 -3873 2003 151 0 0 chr2 75570418 75570710 -177685873 + AluSx SINE Alu 1 292 -20 207 0 0 0 chr2 75570736 75570759 -177685824 + (A)n Simple_repeat Simple_repeat 1 23 0 944 189 30 0 chr2 75571330 75571494 -177685089 + AluJo SINE Alu 1 169 -143 742 173 14 0 chr2 75571494 75571633 -177684950 + L1MB4 LINE L1 6034 6174 -6 285 236 121 14 chr2 75571636 75571776 -177684807 + L1MEc LINE L1 1628 1782 -4614 24 0 0 0 chr2 75571944 75571968 -177684615 + AT_rich Low_complexity Low_complexity 1 24 0 1432 86 0 0 chr2 75572029 75572204 -177684379 + AluSx SINE Alu 1 175 -137 683 283 63 34 chr2 75572669 75572906 -177683677 + MIR SINE MIR 2 245 -17 2242 117 0 0 chr2 75572909 75573208 -177683375 - AluSx SINE Alu -13 299 1 1004 99 0 0 chr2 75573581 75573712 -177682871 - AluY SINE Alu -180 131 1 336 48 0 0 chr2 75573786 75573828 -177682755 + (GA)n Simple_repeat Simple_repeat 1 42 0 1325 156 0 32 chr2 75573865 75574083 -177682500 - AluJo SINE Alu -101 211 1 1890 233 104 57 chr2 75574675 75574950 -177681633 + L2 LINE L2 1798 2058 -1256 536 186 155 6 chr2 75574950 75575111 -177681472 + MER53 DNA DNA 5 189 0 1890 233 104 57 chr2 75575111 75575352 -177681231 + L2 LINE L2 2058 2354 -960 2116 132 0 3 chr2 75575352 75575648 -177680935 - AluSx SINE Alu -17 295 1 1890 233 104 57 chr2 75575648 75575782 -177680801 + L2 LINE L2 2354 2480 -834 5079 136 35 43 chr2 75575884 75575950 -177680633 + L1MA4A LINE L1 5318 5383 -920 2373 95 3 0 chr2 75575950 75576254 -177680329 + AluSg SINE Alu 5 309 -1 5079 136 35 43 chr2 75576254 75577173 -177679410 + L1MA4A LINE L1 5383 6296 -7 2208 125 0 3 chr2 75577398 75577711 -177678872 - AluSx SINE Alu 0 312 1 1325 249 90 6 chr2 75577720 75577904 -177678679 + MLT1I LTR MaLR 28 195 -214 947 241 28 5 chr2 75577904 75578120 -177678463 + MER58A DNA MER1_type 1 221 -3 1325 249 90 6 chr2 75578120 75578281 -177678302 + MLT1I LTR MaLR 195 402 -7 1146 120 0 38 chr2 75579012 75579196 -177677387 + U2 snRNA snRNA 8 184 -4 216 0 0 0 chr2 75579656 75579680 -177676903 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 518 291 6 23 chr2 75580960 75581132 -177675451 + L1MEc LINE L1 44 212 -6184 1616 236 51 11 chr2 75581272 75581503 -177675080 - L1M4 LINE L1 -2646 3736 3516 1570 165 76 7 chr2 75581503 75581794 -177674789 - AluJb SINE Alu -1 311 1 1616 236 51 11 chr2 75581794 75582109 -177674474 - L1M4 LINE L1 -2866 3516 3168 237 286 119 12 chr2 75582530 75582614 -177673969 - MIR SINE MIR -61 201 109 1456 169 17 0 chr2 75582735 75582972 -177673611 + AluJo SINE Alu 1 241 -71 1098 137 36 0 chr2 75582972 75583140 -177673443 - LTR8 LTR ERV1 0 691 518 4522 163 18 53 chr2 75583140 75584010 -177672573 - L1M4 LINE L1 -3603 2779 1966 1704 169 43 0 chr2 75584010 75584289 -177672294 - AluJo SINE Alu -20 292 2 4522 163 18 53 chr2 75584289 75584610 -177671973 - L1M4 LINE L1 -4416 1966 1635 1102 172 15 5 chr2 75584615 75584818 -177671765 + MER2 DNA MER2_type 2 206 -139 998 211 0 0 chr2 75584874 75585045 -177671538 + AluJo SINE Alu 1 171 -141 189 0 0 0 chr2 75585150 75585171 -177671412 + (TTTTA)n Simple_repeat Simple_repeat 5 25 0 200 268 18 36 chr2 75585187 75585243 -177671340 + L2 LINE L2 3128 3182 -90 313 295 97 9 chr2 75586162 75586389 -177670194 + L2 LINE L2 2699 2945 -369 743 227 35 25 chr2 75586708 75586911 -177669672 + L2 LINE L2 3109 3313 0 1761 136 7 61 chr2 75587815 75588125 -177668458 - AluJb SINE Alu -19 293 1 290 231 15 15 chr2 75588391 75588456 -177668127 + MIR SINE MIR 76 140 -122 2576 164 12 10 chr2 75588556 75589038 -177667545 - L1 LINE L1 -1103 5043 4561 2754 73 3 0 chr2 75589038 75589392 -177667191 - THE1A LTR MaLR 0 355 1 8419 92 22 10 chr2 75589392 75590543 -177666040 - THE1A-int LTR MaLR 0 1580 417 802 163 0 22 chr2 75590544 75590679 -177665904 + FLAM_C SINE Alu 1 132 -1 263 284 55 47 chr2 75590938 75591065 -177665518 - L2 LINE L2 -14 3299 3172 363 333 16 24 chr2 75591315 75591438 -177665145 + L2 LINE L2 3147 3268 -4 181 351 91 0 chr2 75591448 75591525 -177665058 - L2 LINE L2 -667 2647 2564 2078 120 47 7 chr2 75591802 75592102 -177664481 - AluSx SINE Alu 0 312 1 1040 115 128 78 chr2 75592254 75592472 -177664111 - AluJb SINE Alu -11 301 73 191 186 70 0 chr2 75592614 75592657 -177663926 + MIR SINE MIR 131 176 -86 559 203 275 29 chr2 75592682 75592889 -177663694 + MIR SINE MIR 5 262 0 1827 146 0 55 chr2 75593117 75593446 -177663137 + AluJb SINE Alu 1 311 -1 1513 189 9 89 chr2 75595429 75595858 -177660725 + L1MA5A LINE L1 5879 6273 -24 1550 182 0 30 chr2 75595859 75596155 -177660428 + AluJb SINE Alu 2 288 -24 21 36 0 0 chr2 75596192 75596220 -177660363 + AT_rich Low_complexity Low_complexity 1 28 0 182 333 0 0 chr2 75596822 75596867 -177659716 + MIR SINE MIR 52 96 -166 429 293 93 0 chr2 75597192 75597342 -177659241 - MIR SINE MIR -21 241 78 742 260 25 25 chr2 75597489 75597766 -177658817 - L1ME3A LINE L1 -208 5962 5686 301 259 22 79 chr2 75597809 75597948 -177658635 + Charlie2 DNA MER1_type 2 132 -2650 350 208 0 0 chr2 75597977 75598049 -177658534 + Charlie2 DNA MER1_type 207 278 -2584 204 386 76 8 chr2 75598172 75598304 -177658279 - L2 LINE L2 -199 3073 2933 185 311 27 14 chr2 75599647 75599721 -177656862 - MER5B DNA MER1_type -103 75 1 1688 84 0 5 chr2 75599981 75600196 -177656387 + AluY SINE Alu 86 299 -12 263 303 211 0 chr2 75600234 75600343 -177656240 + L2 LINE L2 3141 3272 0 2017 121 14 0 chr2 75601257 75601538 -177655045 + AluSq SINE Alu 1 285 -28 243 0 0 0 chr2 75601538 75601565 -177655018 + (TTAA)n Simple_repeat Simple_repeat 3 29 0 184 329 76 0 chr2 75601810 75601889 -177654694 + L2 LINE L2 3229 3313 0 188 207 0 0 chr2 75601977 75602006 -177654577 + L3 LINE CR1 1291 1319 -258 25 31 0 0 chr2 75602393 75602425 -177654158 + AT_rich Low_complexity Low_complexity 1 32 0 2223 107 3 7 chr2 75602682 75602991 -177653592 + AluJb SINE Alu 1 308 -4 22 0 0 0 chr2 75602992 75603014 -177653569 + AT_rich Low_complexity Low_complexity 1 22 0 1834 168 0 0 chr2 75603021 75603312 -177653271 + AluJo SINE Alu 9 299 -13 1817 167 0 0 chr2 75603518 75603800 -177652783 + AluJo SINE Alu 11 292 -20 636 264 107 5 chr2 75603933 75604130 -177652453 - MIR SINE MIR -14 248 32 786 241 24 42 chr2 75604280 75604492 -177652091 - MIR SINE MIR -50 212 5 310 154 77 11 chr2 75604959 75605050 -177651533 + Charlie7 DNA MER1_type 2439 2535 -77 614 244 45 0 chr2 75605604 75605760 -177650823 + L1ME4a LINE L1 5530 5692 -429 2264 97 0 7 chr2 75605768 75606066 -177650517 + AluSg SINE Alu 1 296 -14 322 291 126 15 chr2 75606192 75606391 -177650192 + L1ME4a LINE L1 5901 6121 0 1100 158 27 0 chr2 75606516 75606699 -177649884 + MER5A DNA MER1_type 1 188 -1 528 221 0 69 chr2 75607495 75607640 -177648943 - MER91B DNA MER1_type -52 138 4 2372 79 3 13 chr2 75608319 75608622 -177647961 - AluSq SINE Alu -13 300 1 2257 150 17 10 chr2 75609233 75609640 -177646943 - L1MA7 LINE L1 -9 6282 5873 1650 169 21 7 chr2 75609747 75610037 -177646546 + AluJb SINE Alu 1 294 -18 385 83 111 14 chr2 75610045 75610117 -177646466 - L1MD1 LINE L1 -6 6236 6158 627 166 22 22 chr2 75610118 75610257 -177646326 - L1M4 LINE L1 -885 5655 5517 914 169 6 6 chr2 75610422 75610588 -177645995 - FRAM SINE Alu 0 166 1 3662 231 50 13 chr2 75610600 75611692 -177644891 - L1M4 LINE L1 -1499 5041 3909 241 185 0 0 chr2 75611743 75611797 -177644786 - L1M4 LINE L1 -2722 3818 3765 1607 130 87 25 chr2 75611803 75612080 -177644503 - AluSx SINE Alu -16 296 3 1124 201 59 0 chr2 75612110 75612329 -177644254 - AluJb SINE Alu -48 264 33 961 213 85 33 chr2 75612373 75612739 -177643844 - L1M4 LINE L1 -2831 3709 3325 459 0 0 0 chr2 75612745 75612796 -177643787 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 627 175 16 40 chr2 75612826 75612952 -177643631 - AluJb SINE Alu -103 209 87 1620 219 41 30 chr2 75612958 75613450 -177643133 - L1M4 LINE L1 -3227 3313 2817 471 165 70 13 chr2 75613451 75613609 -177642974 - L1MDa LINE L1 -2887 3653 3487 * 1652 191 57 73 chr2 75613600 75614065 -177642518 - L1MDa LINE L1 -3706 2834 2363 1501 170 50 25 chr2 75614065 75614342 -177642241 - AluJb SINE Alu -28 284 1 1478 194 32 18 chr2 75614345 75614505 -177642078 - AluJo SINE Alu -24 288 121 198 71 0 0 chr2 75614505 75614533 -177642050 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 1478 194 32 18 chr2 75614533 75614656 -177641927 - AluJo SINE Alu -191 121 1 1652 191 57 73 chr2 75614656 75614947 -177641636 - L1MDa LINE L1 -4179 2361 2081 237 242 61 30 chr2 75615250 75615481 -177641102 + L1MC4a LINE L1 4381 4618 -1528 710 210 93 33 chr2 75615564 75615897 -177640686 + L1MC4 LINE L1 7688 8040 -2 1792 245 84 48 chr2 75616089 75616402 -177640181 + L1MC4a LINE L1 4904 4637 -1509 1635 129 94 0 chr2 75616402 75616657 -177639926 - AluSx SINE Alu 0 312 34 1792 245 84 48 chr2 75616657 75617454 -177639129 + L1MC4a LINE L1 4636 5403 -743 24 32 0 0 chr2 75617662 75617693 -177638890 + AT_rich Low_complexity Low_complexity 1 31 0 1393 45 6 22 chr2 75617874 75618053 -177638530 + AluY SINE Alu 120 295 -16 1981 159 50 32 chr2 75618839 75619382 -177637201 + MLT2A2 LTR ERVL 1 554 0 1372 189 8 12 chr2 75619558 75619812 -177636771 + AluJo SINE Alu 43 295 -17 1348 219 79 11 chr2 75620200 75620556 -177636027 + L1ME1 LINE L1 5683 6062 -104 597 177 146 0 chr2 75620628 75620758 -177635825 - MLT1B LTR MaLR -48 342 194 793 106 16 8 chr2 75620796 75620919 -177635664 + MER84-int LTR ERV1 2107 2230 -2724 645 103 11 0 chr2 75620919 75621006 -177635577 - AluJ/FLAM SINE Alu -220 92 5 432 133 12 0 chr2 75621038 75621121 -177635462 + L1M3 LINE L1 5476 5559 -624 3179 177 35 7 chr2 75621121 75621798 -177634785 - L1 LINE L1 -1944 4202 3507 1664 147 27 15 chr2 75621919 75622178 -177634405 + AluJb SINE Alu 36 297 -15 944 115 6 6 chr2 75622178 75622335 -177634248 - MER2 DNA MER2_type -79 266 110 1731 177 10 10 chr2 75622486 75622774 -177633809 + AluJb SINE Alu 1 288 -24 354 22 0 0 chr2 75622780 75622826 -177633757 + MADE1 DNA Mariner 1 46 -34 678 241 94 27 chr2 75623240 75623464 -177633119 + MIR SINE MIR 11 249 -13 206 273 0 65 chr2 75625045 75625122 -177631461 - MER5A DNA MER1_type -22 167 96 1161 66 0 0 chr2 75625234 75625405 -177631178 - AluY SINE Alu 0 303 133 2146 80 0 28 chr2 75625405 75625694 -177630889 - AluY SINE Alu -11 300 20 339 307 10 21 chr2 75626019 75626211 -177630372 + L1MC4a LINE L1 5763 5954 -167 192 152 0 0 chr2 75626216 75626249 -177630334 + (CATATA)n Simple_repeat Simple_repeat 2 34 0 2699 163 8 24 chr2 75626818 75626963 -177629620 - L1M4c LINE L1 -5855 529 383 1661 168 0 4 chr2 75626963 75627231 -177629352 - AluJb SINE Alu -12 300 34 2699 163 8 24 chr2 75627231 75627577 -177629006 - L1M4c LINE L1 -6001 383 46 5076 192 32 36 chr2 75627585 75628710 -177627873 - L1M4 LINE L1 -1154 4992 3871 1646 101 0 38 chr2 75628710 75628948 -177627635 - AluSg/x SINE Alu -2 308 80 5076 192 32 36 chr2 75628948 75629162 -177627421 - L1M4 LINE L1 -2275 3871 3658 2005 106 33 33 chr2 75629435 75629737 -177626846 + AluSx SINE Alu 1 302 -10 225 261 116 0 chr2 75630342 75630480 -177626103 + L1ME LINE L1 5710 5863 -258 230 185 37 19 chr2 75630623 75630677 -177625906 + (CATATA)n Simple_repeat Simple_repeat 1 55 0 894 244 132 45 chr2 75630677 75631100 -177625483 + MLT1C LTR MaLR 1 460 -7 30 0 0 0 chr2 75632758 75632788 -177623795 + AT_rich Low_complexity Low_complexity 1 30 0 389 318 66 51 chr2 75632927 75633336 -177623247 + L1M4 LINE L1 2732 3146 -3000 180 111 0 0 chr2 75633684 75633711 -177622872 + (TATG)n Simple_repeat Simple_repeat 4 30 0 210 71 0 0 chr2 75633894 75633922 -177622661 + (A)n Simple_repeat Simple_repeat 1 28 0 2340 128 11 11 chr2 75633963 75634338 -177622245 + THE1C LTR MaLR 1 375 0 402 264 109 13 chr2 75634356 75634542 -177622041 - MIR SINE MIR -15 247 45 189 0 0 0 chr2 75634679 75634700 -177621883 + (T)n Simple_repeat Simple_repeat 1 21 0 230 0 0 32 chr2 75635162 75635193 -177621390 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1915 138 4 4 chr2 75635198 75635474 -177621109 - AluSx SINE Alu -36 276 1 1208 176 14 41 chr2 75635533 75635754 -177620829 + AluJo SINE Alu 84 298 -14 2347 181 70 29 chr2 75635754 75636341 -177620242 + L1MB7 LINE L1 5323 5933 -251 23 0 0 0 chr2 75637444 75637467 -177619116 + AT_rich Low_complexity Low_complexity 1 23 0 2416 53 0 0 chr2 75637469 75637772 -177618811 + AluY SINE Alu 2 304 0 1834 142 7 10 chr2 75637967 75638276 -177618307 + AluJb SINE Alu 1 308 -4 1599 235 46 62 chr2 75638300 75638635 -177617948 + L1MC4a LINE L1 5352 5672 -2136 2168 123 0 0 chr2 75638635 75638943 -177617640 + AluSx SINE Alu 1 308 -4 1599 235 46 62 chr2 75638943 75639284 -177617299 + L1MC4a LINE L1 5672 6017 -1791 659 235 106 0 chr2 75640245 75640424 -177616159 - L2 LINE L2 -4 3309 3112 * 976 243 102 88 chr2 75640423 75640743 -177615840 + L2 LINE L2 2382 2696 -617 2143 111 0 7 chr2 75640743 75640897 -177615686 - AluSx SINE Alu -25 287 134 2291 65 3 53 chr2 75640897 75641219 -177615364 - AluY SINE Alu -5 306 1 2143 111 0 7 chr2 75641219 75641353 -177615230 - AluSx SINE Alu -178 134 1 976 243 102 88 chr2 75641353 75641888 -177614695 + L2 LINE L2 2696 3313 0 23 0 0 0 chr2 75642101 75642124 -177614459 + AT_rich Low_complexity Low_complexity 1 23 0 197 174 65 43 chr2 75642187 75642233 -177614350 - MER5A DNA MER1_type 0 189 143 24 32 0 0 chr2 75642675 75642706 -177613877 + AT_rich Low_complexity Low_complexity 1 31 0 4006 149 74 33 chr2 75643508 75644738 -177611845 + L1MB8 LINE L1 4904 6172 -6 24 0 0 0 chr2 75645998 75646022 -177610561 + AT_rich Low_complexity Low_complexity 1 24 0 487 299 60 40 chr2 75646033 75646289 -177610294 + MIR SINE MIR 8 262 0 1974 238 86 69 chr2 75646909 75648061 -177608522 - L1M4c LINE L1 -3748 2634 1474 2172 111 0 10 chr2 75648061 75648359 -177608224 - AluSx SINE Alu -17 295 1 1974 238 86 69 chr2 75648359 75648571 -177608012 - L1M4c LINE L1 -4908 1474 1267 1797 150 17 17 chr2 75648689 75648983 -177607600 - AluJb SINE Alu -18 294 1 255 155 35 0 chr2 75649125 75649183 -177607400 - L1MD2 LINE L1 -2 6357 6298 245 231 31 0 chr2 75649183 75649248 -177607335 + (TATG)n Simple_repeat Simple_repeat 2 68 0 1800 216 88 20 chr2 75649264 75649820 -177606763 - L1MD2 LINE L1 -45 6314 5721 297 270 0 0 chr2 75649840 75649903 -177606680 + MER21B LTR ERV1 21 83 -780 1909 239 58 51 chr2 75649963 75650615 -177605968 + MER21B LTR ERV1 98 754 -109 1259 186 14 38 chr2 75650665 75650956 -177605627 - L1MD2 LINE L1 -516 5726 5443 2281 197 82 3 chr2 75651105 75651714 -177604869 + Charlie1 DNA MER1_type 1991 2647 -114 1055 134 28 63 chr2 75651715 75651890 -177604693 - L1MA9 LINE L1 0 6312 6147 2081 154 0 10 chr2 75651890 75652202 -177604381 + AluJb SINE Alu 3 311 -1 1055 134 28 63 chr2 75652202 75652279 -177604304 - L1MA9 LINE L1 -165 6147 6069 1939 246 62 36 chr2 75652294 75653107 -177603476 - L1M3e LINE L1 -4938 2092 1259 1120 218 56 11 chr2 75653109 75653394 -177603189 - L1M3e LINE L1 -6732 298 1 353 198 0 23 chr2 75653398 75653484 -177603099 + Charlie1 DNA MER1_type 2634 2717 -44 778 200 0 0 chr2 75653493 75653623 -177602960 - FLAM_C SINE Alu -1 132 3 966 206 160 36 chr2 75653677 75654070 -177602513 + L1MC4 LINE L1 7601 8042 0 930 256 50 3 chr2 75654647 75654968 -177601615 + MER46C DNA MER2_type 3 338 0 967 213 146 56 chr2 75655508 75655914 -177600669 + LTR1B LTR ERV1 343 983 -37 4060 150 57 27 chr2 75656136 75656925 -177599658 - MER6 DNA MER2_type -1 864 52 614 136 41 54 chr2 75656926 75657073 -177599510 - LTR23 LTR ERV1 0 437 293 2092 133 0 0 chr2 75657100 75657385 -177599198 - AluSx SINE Alu -27 285 1 2119 115 0 3 chr2 75657406 75657719 -177598864 - AluSx SINE Alu 0 312 1 1589 109 51 0 chr2 75657727 75658001 -177598582 - LTR23 LTR ERV1 -139 298 11 314 352 22 44 chr2 75658265 75658369 -177598214 + MIR SINE MIR 48 148 -114 1678 138 0 91 chr2 75658369 75658688 -177597895 + AluJo SINE Alu 1 290 -22 314 352 22 44 chr2 75658688 75658765 -177597818 + MIR SINE MIR 148 225 -37 2216 103 100 0 chr2 75658895 75659234 -177597349 + MER83C LTR ERV1 1 373 0 670 167 0 0 chr2 75659419 75659527 -177597056 - FLAM_A SINE Alu -34 108 1 250 324 182 9 chr2 75659777 75660095 -177596488 + L2 LINE L2 1609 1981 -1333 342 262 78 74 chr2 75660253 75660497 -177596086 + MLT1H LTR MaLR 68 312 -237 303 334 185 18 chr2 75660622 75660951 -177595632 + L2 LINE L2 1960 2343 -971 1136 156 0 0 chr2 75660951 75661118 -177595465 - AluJb SINE Alu -12 300 134 180 304 95 34 chr2 75661655 75661803 -177594780 + L2 LINE L2 1053 1209 -2105 287 222 30 61 chr2 75662029 75662128 -177594455 - MLT1G LTR MaLR 0 590 495 2140 200 7 7 chr2 75662129 75662578 -177594005 - L1MB7 LINE L1 -76 6108 5660 1205 173 5 23 chr2 75662579 75662799 -177593784 - AluJb SINE Alu -12 300 85 438 97 0 14 chr2 75662799 75662871 -177593712 - L1MB7 LINE L1 -516 5668 5598 1781 185 14 0 chr2 75662871 75663168 -177593415 - AluJo SINE Alu -11 301 1 3504 177 55 31 chr2 75663173 75664226 -177592357 - L1MB7 LINE L1 -695 5489 4421 1971 193 56 30 chr2 75664247 75664384 -177592199 - L1MB7 LINE L1 -2875 3271 3139 2269 64 0 7 chr2 75664384 75664686 -177591897 - AluY SINE Alu 0 300 1 1971 193 56 30 chr2 75664686 75665045 -177591538 - L1MB7 LINE L1 -3007 3139 2791 290 65 0 22 chr2 75665045 75665091 -177591492 + (TTTTA)n Simple_repeat Simple_repeat 1 45 0 2212 104 0 0 chr2 75665091 75665371 -177591212 - AluSx SINE Alu -32 280 1 1971 193 56 30 chr2 75665371 75665461 -177591122 - L1MB7 LINE L1 -3354 2792 2667 306 312 184 13 chr2 75665597 75665831 -177590752 + L2 LINE L2 2381 2654 -660 882 219 77 5 chr2 75666040 75666236 -177590347 + MIR SINE MIR 6 215 -47 2273 101 14 0 chr2 75666353 75666649 -177589934 - AluSx SINE Alu -12 300 1 442 298 79 17 chr2 75666832 75667010 -177589573 - MIR SINE MIR 0 262 74 1179 171 5 29 chr2 75667152 75667357 -177589226 - AluJo SINE Alu -109 203 4 22 35 0 0 chr2 75667379 75667408 -177589175 + AT_rich Low_complexity Low_complexity 1 29 0 248 375 0 12 chr2 75667778 75667858 -177588725 + L2 LINE L2 3094 3172 -100 295 260 77 19 chr2 75669073 75669177 -177587406 - MIR SINE MIR -30 232 123 279 333 0 0 chr2 75669255 75669336 -177587247 + GA-rich Low_complexity Low_complexity 1 81 0 218 233 0 33 chr2 75669554 75669614 -177586969 + L2 LINE L2 3251 3308 -5 357 238 58 107 chr2 75669717 75670166 -177586417 + MER65A LTR ERV1 19 445 0 1956 152 0 19 chr2 75670320 75670629 -177585954 + AluJo SINE Alu 1 303 -9 635 297 108 13 chr2 75671089 75671434 -177585149 - L3 LINE CR1 -27 1550 1119 1105 241 20 12 chr2 75671466 75671715 -177584868 + MIR SINE MIR 2 252 -10 248 268 89 49 chr2 75671760 75671883 -177584700 - L3 LINE CR1 -550 1027 900 2068 131 3 0 chr2 75673340 75673630 -177582953 + AluSx SINE Alu 2 292 -20 627 176 30 38 chr2 75674283 75674406 -177582177 + FLAM_A SINE Alu 10 133 -178 2278 120 0 0 chr2 75674406 75674714 -177581869 + AluSc SINE Alu 1 308 -1 1250 267 61 50 chr2 75674911 75675670 -177580913 + L1M2 LINE L1 1543 2271 -4125 1847 141 28 7 chr2 75675864 75676154 -177580429 - AluSx SINE Alu -4 308 13 877 144 0 0 chr2 75676305 75676430 -177580153 + AluJ SINE Alu 1 125 -187 1035 131 51 17 chr2 75676476 75676651 -177579932 + AluJ SINE Alu 129 309 -3 2116 123 3 3 chr2 75676725 75677033 -177579550 + AluSx SINE Alu 1 308 -4 181 231 123 15 chr2 75677398 75677463 -177579120 - L2 LINE L2 -793 2521 2450 333 316 111 13 chr2 75677649 75677883 -177578700 + L1ME LINE L1 564 820 -5250 2170 136 7 0 chr2 75678006 75678316 -177578267 + AluSx SINE Alu 1 312 0 2054 105 3 3 chr2 75678482 75678768 -177577815 + AluSq SINE Alu 1 286 -27 21 0 0 0 chr2 75678768 75678789 -177577794 + AT_rich Low_complexity Low_complexity 1 21 0 1799 154 16 13 chr2 75678862 75679168 -177577415 + AluJb SINE Alu 1 307 -5 1734 141 0 4 chr2 75679168 75679423 -177577160 + AluSq SINE Alu 1 254 -59 342 150 0 0 chr2 75679547 75679607 -177576976 + L1MB8 LINE L1 6114 6173 -5 461 236 100 0 chr2 75679754 75679894 -177576689 - HAL1 LINE L1 -1575 932 779 264 292 92 0 chr2 75680027 75680147 -177576436 - HAL1 LINE L1 -1786 721 591 223 215 21 86 chr2 75680238 75680331 -177576252 + MIR SINE MIR 120 206 -56 180 244 22 0 chr2 75680623 75680668 -177575915 - L2 LINE L2 -332 2940 2895 1701 156 69 80 chr2 75680720 75681157 -177575426 + MSTB1 LTR MaLR 1 432 0 393 307 157 21 chr2 75681274 75681554 -177575029 - L2 LINE L2 -621 2693 2376 536 306 151 23 chr2 75681555 75682176 -177574407 - L2 LINE L2 0 3313 2556 1024 199 20 4 chr2 75682962 75683208 -177573375 + L1MD3 LINE L1 6867 7116 -879 266 262 0 36 chr2 75683208 75683292 -177573291 + MLT1F1 LTR MaLR 35 115 -452 2378 202 39 15 chr2 75683295 75683879 -177572704 + L1MD3 LINE L1 7397 7994 -1 2315 118 3 0 chr2 75683891 75684196 -177572387 + AluSx SINE Alu 3 308 -4 559 185 30 30 chr2 75684216 75684351 -177572232 - L1MC4a LINE L1 -1965 5843 5709 729 161 48 0 chr2 75684361 75684485 -177572098 + FLAM_C SINE Alu 1 130 -13 848 237 24 100 chr2 75684554 75684825 -177571758 - L1MC4a LINE L1 -2126 5682 5445 1898 145 3 16 chr2 75684825 75685128 -177571455 - AluJo SINE Alu -13 299 1 848 237 24 100 chr2 75685128 75685227 -177571356 - L1MC4a LINE L1 -2363 5445 5340 1777 177 0 10 chr2 75685268 75685567 -177571016 + AluJo SINE Alu 1 296 -16 900 271 51 33 chr2 75686394 75686730 -177569853 + MER115 DNA AcHobo 15 356 -337 849 240 73 7 chr2 75686760 75687004 -177569579 + MER115 DNA AcHobo 439 4029 -2 392 151 0 0 chr2 75687200 75687273 -177569310 + L1PA13 LINE L1 6090 6162 -1 207 0 0 0 chr2 75687353 75687376 -177569207 + (A)n Simple_repeat Simple_repeat 1 23 0 339 253 33 0 chr2 75687404 75687495 -177569088 - MLT1L LTR MaLR -324 291 198 442 230 96 22 chr2 75687558 75687693 -177568890 + MER5B DNA MER1_type 4 148 -30 30 0 0 0 chr2 75687693 75687723 -177568860 + AT_rich Low_complexity Low_complexity 1 30 0 1737 156 27 34 chr2 75687726 75688021 -177568562 - AluJb SINE Alu -16 296 4 183 163 122 41 chr2 75688068 75688117 -177568466 + MER5A DNA MER1_type 136 188 -1 2438 251 161 20 chr2 75688413 75689428 -177567155 + L2 LINE L2 2109 3310 -3 2375 174 58 23 chr2 75689557 75690044 -177566539 + MLT1D LTR MaLR 1 504 -1 584 287 159 25 chr2 75690117 75690182 -177566401 + L2 LINE L2 1465 1520 -1794 1716 214 91 30 chr2 75690182 75690644 -177565939 - MER110 LTR ERV1 0 491 2 584 287 159 25 chr2 75690644 75690899 -177565684 + L2 LINE L2 1520 1828 -1486 527 309 33 40 chr2 75690877 75691152 -177565431 + L2 LINE L2 2823 3095 -218 * 1595 161 31 9 chr2 75691181 75691498 -177565085 - L1MB3 LINE L1 -8 6175 5852 627 280 93 43 chr2 75691602 75692399 -177564184 + L1ME LINE L1 805 1641 -4755 * 3129 169 38 61 chr2 75692398 75692457 -177564126 + L1MB7 LINE L1 5434 5493 -691 1956 133 3 3 chr2 75692457 75692750 -177563833 - AluSx SINE Alu -19 293 1 3129 169 38 61 chr2 75692750 75693446 -177563137 + L1MB7 LINE L1 5493 6172 -12 467 225 128 84 chr2 75693435 75693817 -177562766 + L1ME LINE L1 1623 2021 -4375 * 954 196 14 10 chr2 75693959 75694168 -177562415 - MER2 DNA MER2_type -135 210 1 376 306 14 5 chr2 75694169 75694391 -177562192 + L1ME LINE L1 2081 2304 -4092 1358 224 66 0 chr2 75694417 75694765 -177561818 + L1MC4 LINE L1 7529 7899 -143 347 305 73 56 chr2 75695035 75695268 -177561315 + L1ME LINE L1 5463 5643 -592 377 229 9 57 chr2 75695270 75695375 -177561208 + MER5A DNA MER1_type 10 109 -80 234 242 61 0 chr2 75695464 75695530 -177561053 + L1ME LINE L1 5750 5819 -420 732 238 132 58 chr2 75695536 75695915 -177560668 - MLT1I LTR MaLR -1 408 2 584 238 8 8 chr2 75696015 75696137 -177560446 + L2 LINE L2 3188 3309 -4 23 54 0 0 chr2 75696361 75696398 -177560185 + AT_rich Low_complexity Low_complexity 1 37 0 1807 154 6 45 chr2 75696471 75696783 -177559800 - AluSx SINE Alu -12 300 1 21 0 0 0 chr2 75696993 75697014 -177559569 + AT_rich Low_complexity Low_complexity 1 21 0 1879 178 7 52 chr2 75697250 75697638 -177558945 + MLT2D LTR ERVL 5 374 -40 378 0 0 0 chr2 75697638 75697680 -177558903 + (CA)n Simple_repeat Simple_repeat 2 43 0 1879 178 7 52 chr2 75697680 75697717 -177558866 + MLT2D LTR ERVL 374 411 -3 411 269 130 11 chr2 75698970 75699145 -177557438 + MIR SINE MIR 16 206 -56 1573 147 7 73 chr2 75699224 75699524 -177557059 - AluJo SINE Alu -30 282 3 1000 257 66 44 chr2 75699527 75699889 -177556694 - L2 LINE L2 0 3313 2944 264 268 0 0 chr2 75701028 75701099 -177555484 + (CA)n Simple_repeat Simple_repeat 1 71 0 517 297 105 88 chr2 75701394 75701517 -177555066 + L3 LINE CR1 883 1002 -575 1246 181 0 18 chr2 75701517 75701743 -177554840 - MER58A DNA MER1_type -2 222 1 517 297 105 88 chr2 75701743 75702199 -177554384 + L3 LINE CR1 1002 1472 -105 651 199 21 47 chr2 75702330 75702521 -177554062 + MER112 DNA MER1_type 29 214 -46 1967 118 0 64 chr2 75702591 75702904 -177553679 + AluSx SINE Alu 1 293 -19 2078 123 7 16 chr2 75702961 75703270 -177553313 + AluSx SINE Alu 1 306 -6 1987 148 0 29 chr2 75704113 75704424 -177552159 + AluSx SINE Alu 1 302 -10 1942 155 7 0 chr2 75704630 75704920 -177551663 + AluSx SINE Alu 1 292 -20 1256 175 0 0 chr2 75705752 75705941 -177550642 + AluSx SINE Alu 1 189 -123 229 291 94 23 chr2 75705988 75706287 -177550296 - L1ME4a LINE L1 -117 6004 5685 326 252 138 38 chr2 75706349 75706508 -177550075 - L1ME4a LINE L1 -2379 5429 5255 240 308 0 0 chr2 75706673 75706777 -177549806 - L1P LINE L1 -1092 5054 4951 609 252 52 17 chr2 75706930 75707160 -177549423 - MER46C DNA MER2_type 0 338 101 461 302 52 17 chr2 75707358 75707530 -177549053 + L1M4 LINE L1 4142 4319 -1827 2502 38 0 7 chr2 75707879 75708172 -177548411 + AluY SINE Alu 1 291 -20 895 297 97 62 chr2 75708608 75709207 -177547376 + L2 LINE L2 1067 1686 -1628 679 231 0 8 chr2 75709218 75709352 -177547231 - AluSq/x SINE Alu -180 133 1 1409 304 115 39 chr2 75709447 75710414 -177546169 + L2 LINE L2 1937 2976 -338 375 243 162 0 chr2 75710485 75710596 -177545987 + L2 LINE L2 3185 3313 0 1824 153 28 64 chr2 75710798 75711158 -177545425 + MER7A DNA MER2_type 2 346 0 284 317 16 49 chr2 75711793 75711916 -177544667 + MIR SINE MIR 28 146 -116 732 181 0 23 chr2 75712062 75712195 -177544388 + FLAM_C SINE Alu 4 133 -10 362 244 106 8 chr2 75713691 75713814 -177542769 - MIR SINE MIR -57 205 71 299 324 49 0 chr2 75713877 75713979 -177542604 - MIR3 SINE MIR -15 193 87 545 303 83 24 chr2 75714189 75714443 -177542140 + MLT1L LTR MaLR 115 383 -232 482 223 25 0 chr2 75714520 75714641 -177541942 + MLT1L LTR MaLR 492 615 0 475 355 48 48 chr2 75714719 75715032 -177541551 + L2 LINE L2 2938 3250 -22 306 23 23 0 chr2 75716467 75716510 -177540073 + MADE1 DNA Mariner 3 46 -34 288 61 12 207 chr2 75716527 75716609 -177539974 + MADE1 DNA Mariner 14 79 -1 201 172 21 43 chr2 75716960 75717053 -177539530 + (TA)n Simple_repeat Simple_repeat 1 91 0 * 296 164 15 0 chr2 75717032 75717099 -177539484 + (CA)n Simple_repeat Simple_repeat 2 69 0 872 314 55 38 chr2 75717453 75718087 -177538496 + L1MEd LINE L1 254 898 -5221 2848 109 15 11 chr2 75718094 75718602 -177537981 - MER4B LTR ERV1 0 610 1 339 340 90 25 chr2 75718663 75718863 -177537720 + L1MEd LINE L1 1003 1215 -4904 213 94 0 0 chr2 75719542 75719574 -177537009 + (TC)n Simple_repeat Simple_repeat 1 32 0 395 345 138 24 chr2 75719574 75720135 -177536448 + L2 LINE L2 1711 2206 -1108 627 210 0 36 chr2 75720135 75720273 -177536310 + FLAM_A SINE Alu 1 133 0 395 345 138 24 chr2 75720273 75720603 -177535980 + L2 LINE L2 2206 2704 -610 327 229 55 37 chr2 75720788 75720897 -177535686 + L2 LINE L2 2941 3051 -221 180 0 0 0 chr2 75720952 75720972 -177535611 + (TTTTTG)n Simple_repeat Simple_repeat 3 22 0 1427 137 34 0 chr2 75720993 75721197 -177535386 - AluJo SINE Alu -101 211 1 251 174 0 0 chr2 75721408 75721454 -177535129 - FLAM_A SINE Alu 0 133 88 1077 160 12 6 chr2 75721564 75721733 -177534850 - AluSx SINE Alu -142 170 1 1084 115 20 65 chr2 75721733 75721890 -177534693 - MSTD LTR MaLR -204 192 44 1800 162 28 3 chr2 75721890 75722174 -177534409 + AluJb SINE Alu 1 291 -21 1084 115 20 65 chr2 75722174 75722216 -177534367 - MSTD LTR MaLR -352 44 2 433 199 0 175 chr2 75722218 75722429 -177534154 + L2 LINE L2 3140 3313 0 1681 78 21 0 chr2 75723123 75723365 -177533218 - THE1B-int LTR MaLR -1333 247 1 1805 136 45 67 chr2 75723365 75723799 -177532784 - THE1B LTR MaLR 0 428 3 932 181 22 0 chr2 75723804 75724013 -177532570 - L1ME LINE L1 -666 5503 5277 2042 116 0 0 chr2 75724016 75724283 -177532300 - AluSx SINE Alu -10 302 36 1405 154 107 3 chr2 75724302 75724620 -177531963 - L1MC4 LINE L1 0 8042 7692 724 164 30 8 chr2 75724699 75724833 -177531750 + AluJo SINE Alu 2 138 -174 1181 162 11 0 chr2 75725257 75725436 -177531147 + AluJo SINE Alu 129 309 -3 242 177 66 25 chr2 75725626 75725710 -177530873 + L1M1 LINE L1 5782 5866 -285 24 32 0 0 chr2 75726411 75726442 -177530141 + GC_rich Low_complexity Low_complexity 1 31 0 250 273 65 0 chr2 75727984 75728061 -177528522 + MIR SINE MIR 125 206 -56 302 298 71 0 chr2 75728903 75728987 -177527596 + L3 LINE CR1 1356 1445 -132 202 259 0 0 chr2 75729374 75729428 -177527155 - L2 LINE L2 -557 2757 2704 2387 71 4 0 chr2 75729428 75729734 -177526849 - AluY SINE Alu 0 307 1 1497 126 0 5 chr2 75729736 75729943 -177526640 - AluSx SINE Alu -106 206 1 783 216 116 3 chr2 75732116 75732332 -177524251 + MIR SINE MIR 29 262 0 248 348 0 17 chr2 75732516 75732631 -177523952 + MIR SINE MIR 20 132 -76 227 297 11 0 chr2 75734707 75734798 -177521785 + GA-rich Low_complexity Low_complexity 1 92 0 185 91 0 30 chr2 75734885 75734918 -177521665 + (TCTCCC)n Simple_repeat Simple_repeat 4 35 0 207 69 0 0 chr2 75734918 75734947 -177521636 + (CA)n Simple_repeat Simple_repeat 1 29 0 381 22 0 0 chr2 75736399 75736445 -177520138 + (TG)n Simple_repeat Simple_repeat 2 47 0 216 0 0 0 chr2 75736444 75736468 -177520115 + (TA)n Simple_repeat Simple_repeat 1 24 0 * 234 200 0 46 chr2 75737369 75737434 -177519149 + GA-rich Low_complexity Low_complexity 1 62 0 346 228 87 24 chr2 75737779 75737906 -177518677 - MIR3 SINE MIR -64 144 10 281 325 60 0 chr2 75738099 75738216 -177518367 + L1ME4a LINE L1 5980 6103 -18 516 247 41 23 chr2 75738353 75738551 -177518032 + MIR SINE MIR 22 261 -1 232 185 160 50 chr2 75738562 75738681 -177517902 + L1ME4a LINE L1 5986 6117 -4 975 160 0 0 chr2 75738703 75738878 -177517705 + GA-rich Low_complexity Low_complexity 4 178 0 2021 104 13 45 chr2 75738934 75739242 -177517341 + AluSx SINE Alu 1 298 -14 211 355 60 18 chr2 75740207 75740373 -177516210 - L2 LINE L2 -194 3078 2906 2277 153 52 0 chr2 75742144 75742549 -177514034 + MSTB LTR MaLR 1 426 0 571 195 26 52 chr2 75742734 75742888 -177513695 - MIR SINE MIR -22 240 91 502 264 115 63 chr2 75744140 75744504 -177512079 - L1MEd LINE L1 -861 1629 1285 2224 135 0 0 chr2 75744504 75744807 -177511776 - AluSx SINE Alu -9 303 1 502 264 115 63 chr2 75744807 75744922 -177511661 - L1MEd LINE L1 -1205 1285 1177 2437 132 33 21 chr2 75744922 75745345 -177511238 - MSTC LTR MaLR 0 428 1 502 264 115 63 chr2 75745345 75745648 -177510935 - L1MEd LINE L1 -1313 1177 895 1822 226 91 29 chr2 75745669 75745847 -177510736 - L1ME3 LINE L1 -3 6159 5993 1684 119 36 86 chr2 75745847 75746150 -177510433 - AluJo SINE Alu -10 302 15 1822 226 91 29 chr2 75746150 75746432 -177510151 - L1ME3 LINE L1 -169 5993 5651 1875 99 110 0 chr2 75746432 75746704 -177509879 - AluSq SINE Alu -11 302 1 1822 226 91 29 chr2 75746704 75746838 -177509745 - L1ME3 LINE L1 -511 5651 5527 372 284 133 40 chr2 75746861 75747086 -177509497 - L1MEd LINE L1 -5278 841 596 418 311 102 53 chr2 75747088 75747538 -177509045 - L1MEd LINE L1 -5558 561 90 317 308 67 10 chr2 75747540 75747644 -177508939 + L1MC5 LINE L1 7817 7926 -35 374 255 73 73 chr2 75747648 75747739 -177508844 + L1MC4 LINE L1 7690 7780 -262 1357 181 75 26 chr2 75747739 75748005 -177508578 + AluJo SINE Alu 4 282 -30 288 0 0 0 chr2 75748008 75748040 -177508543 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 374 255 73 73 chr2 75748040 75748203 -177508380 + L1MC4 LINE L1 7781 8042 0 235 323 0 0 chr2 75748191 75748256 -177508327 - L1MEd LINE L1 -6048 71 7 * 1338 122 0 0 chr2 75748897 75749077 -177507506 + FRAM SINE Alu 1 176 0 450 231 102 9 chr2 75749822 75749930 -177506653 - L2 LINE L2 -4 3309 3192 1988 158 0 7 chr2 75750002 75750300 -177506283 - AluJo SINE Alu -16 296 1 428 245 133 7 chr2 75750519 75750662 -177505921 - MIR SINE MIR -2 260 100 280 335 25 57 chr2 75750874 75751155 -177505428 - L2 LINE L2 -814 2500 2229 547 59 12 12 chr2 75751194 75751279 -177505304 + (TAGA)n Simple_repeat Simple_repeat 3 87 0 257 298 112 34 chr2 75751538 75752004 -177504579 + L1ME4a LINE L1 5501 6075 -46 830 199 101 25 chr2 75752005 75752281 -177504302 - MER33 DNA MER1_type -1 323 27 350 309 24 32 chr2 75752302 75752425 -177504158 - MIR SINE MIR 0 262 141 268 242 94 8 chr2 75753757 75753885 -177502698 - L1MC5 LINE L1 -268 7693 7555 395 298 149 11 chr2 75754555 75754736 -177501847 - MIR SINE MIR -10 252 47 224 189 132 0 chr2 75755601 75755654 -177500929 + MIR SINE MIR 96 155 -107 891 144 0 0 chr2 75755671 75755803 -177500780 - AluJb SINE Alu -11 301 170 195 42 0 0 chr2 75757981 75758005 -177498578 + (CCCCG)n Simple_repeat Simple_repeat 1 24 0 623 97 26 32 chr2 75758182 75758336 -177498247 + MER52A LTR ERV1 1442 1594 -161 27 0 0 0 chr2 75758684 75758711 -177497872 + GC_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr2 75758921 75758949 -177497634 + GC_rich Low_complexity Low_complexity 1 28 0 342 0 0 0 chr2 75759712 75759750 -177496833 + (CA)n Simple_repeat Simple_repeat 2 39 0 24 0 0 0 chr2 75759846 75759870 -177496713 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 75760506 75760527 -177496056 + GC_rich Low_complexity Low_complexity 1 21 0 1887 175 29 37 chr2 75761550 75761933 -177494650 - MLT1B LTR MaLR -4 386 7 189 361 48 0 chr2 75763591 75763674 -177492909 - MIR SINE MIR -74 188 102 271 380 25 0 chr2 75766186 75766307 -177490276 - MIR3 SINE MIR -26 182 59 21 0 0 0 chr2 75767006 75767027 -177489556 + AT_rich Low_complexity Low_complexity 1 21 0 401 324 159 40 chr2 75767629 75768782 -177487801 + L2 LINE L2 637 1926 -1388 406 302 86 20 chr2 75768860 75769105 -177487478 + L2 LINE L2 2242 2502 -812 336 302 144 35 chr2 75769260 75769601 -177486982 + L2 LINE L2 2878 3255 -17 218 262 175 0 chr2 75771185 75771288 -177485295 - L2 LINE L2 -10 3303 3183 689 310 134 53 chr2 75771529 75771668 -177484915 - L2 LINE L2 -456 2858 2732 1625 141 92 39 chr2 75771668 75771951 -177484632 - AluJo SINE Alu -14 298 1 689 310 134 53 chr2 75771951 75772549 -177484034 - L2 LINE L2 -582 2732 2061 29 0 0 0 chr2 75774466 75774495 -177482088 + GC_rich Low_complexity Low_complexity 1 29 0 785 332 55 49 chr2 75775774 75776669 -177479914 + L2 LINE L2 2365 3272 0 476 261 45 15 chr2 75777294 75777428 -177479155 - MIR SINE MIR -35 227 90 578 292 26 13 chr2 75777474 75777700 -177478883 - L1MC5 LINE L1 -36 7925 7697 1648 175 99 47 chr2 75777707 75778171 -177478412 - L1MD3 LINE L1 0 7995 7508 905 184 16 21 chr2 75778218 75778408 -177478175 - AluJo SINE Alu -6 306 118 745 178 0 15 chr2 75778438 75778573 -177478010 - AluJo SINE Alu -169 133 1 633 240 68 20 chr2 75778573 75778704 -177477879 - L1MC5 LINE L1 -305 7656 7533 2389 90 0 0 chr2 75778704 75779015 -177477568 - AluSx SINE Alu -1 311 1 633 240 68 20 chr2 75779015 75779179 -177477404 - L1MC5 LINE L1 -428 7533 7347 999 93 7 7 chr2 75779436 75779575 -177477008 + AluSq/x SINE Alu 1 139 -174 2162 100 14 0 chr2 75779594 75779884 -177476699 + AluSq SINE Alu 1 294 -19 1942 145 3 3 chr2 75779891 75780187 -177476396 + AluJo SINE Alu 3 298 -14 1849 181 0 0 chr2 75780204 75780502 -177476081 + AluJo SINE Alu 1 298 -14 448 199 106 43 chr2 75780862 75781003 -177475580 + MER5B DNA MER1_type 29 178 0 2013 207 125 2 chr2 75781428 75781998 -177474585 + LTR65 LTR ERV1 1 640 -29 214 352 127 30 chr2 75782038 75782274 -177474309 + L2 LINE L2 2242 2500 -814 * 302 238 50 12 chr2 75782268 75782348 -177474235 + L2 LINE L2 3190 3272 0 1943 158 0 3 chr2 75783152 75783456 -177473127 - AluJo SINE Alu -9 303 1 248 276 19 0 chr2 75783554 75783659 -177472924 - L1ME4a LINE L1 -75 6046 5940 * 360 182 107 16 chr2 75783652 75783773 -177472810 - L1MC4 LINE L1 0 8042 7911 2183 93 28 0 chr2 75783963 75784254 -177472329 - AluSx SINE Alu -11 301 3 22 0 0 0 chr2 75789774 75789796 -177466787 + AT_rich Low_complexity Low_complexity 1 22 0 417 288 0 17 chr2 75790265 75790383 -177466200 + MIR SINE MIR 53 168 -94 247 313 100 0 chr2 75791029 75791109 -177465474 + MIR3 SINE MIR 113 200 -8 231 344 61 8 chr2 75791252 75791383 -177465200 + MER5A DNA MER1_type 27 164 -25 299 296 111 9 chr2 75791397 75791505 -177465078 + L2 LINE L2 3193 3311 -2 356 201 289 47 chr2 75794481 75794630 -177461953 - L1ME4a LINE L1 0 6121 5937 229 333 136 39 chr2 75798736 75799447 -177457136 + L2 LINE L2 1812 2591 -723 305 279 8 8 chr2 75801221 75801350 -177455233 + (TG)n Simple_repeat Simple_repeat 1 129 0 253 345 12 0 chr2 75801678 75801762 -177454821 + L2 LINE L2 1069 1153 -2161 570 269 111 13 chr2 75801960 75802194 -177454389 - LTR33 LTR ERVL -27 494 238 604 146 102 0 chr2 75802404 75802541 -177454042 + AluSg/x SINE Alu 141 291 -18 2253 106 6 0 chr2 75802550 75802861 -177453722 + AluSp SINE Alu 1 313 0 2889 173 31 54 chr2 75802872 75803290 -177453293 + L1ME1 LINE L1 5448 5874 -292 1556 194 10 7 chr2 75803290 75803583 -177453000 - AluJb SINE Alu -18 294 1 2889 173 31 54 chr2 75803583 75803791 -177452792 + L1ME1 LINE L1 5874 6059 -107 1950 137 67 22 chr2 75803791 75804148 -177452435 + THE1C LTR MaLR 3 375 0 2889 173 31 54 chr2 75804148 75804225 -177452358 + L1ME1 LINE L1 6059 6136 -30 185 274 105 57 chr2 75804351 75804475 -177452108 + MIR SINE MIR 92 221 -41 213 170 0 43 chr2 75804488 75804535 -177452048 + (CAGA)n Simple_repeat Simple_repeat 4 48 0 445 203 203 53 chr2 75805961 75806188 -177450395 + L1ME4a LINE L1 5628 5888 -233 660 211 17 30 chr2 75806246 75806425 -177450158 + L1MC4 LINE L1 6717 6941 -1085 1201 252 41 37 chr2 75806443 75806843 -177449740 + L1MC4 LINE L1 7403 7807 -235 2145 92 7 13 chr2 75806843 75807146 -177449437 - AluSc SINE Alu -8 301 1 1201 252 41 37 chr2 75807146 75807181 -177449402 + L1MC4 LINE L1 7807 7840 -202 34 0 0 0 chr2 75807227 75807261 -177449322 + AT_rich Low_complexity Low_complexity 1 34 0 229 276 0 40 chr2 75808704 75808780 -177447803 + L2 LINE L2 3019 3091 -181 225 182 109 0 chr2 75809321 75809376 -177447207 - MIR SINE MIR -19 243 183 204 103 0 26 chr2 75810134 75810173 -177446410 - L2 LINE L2 -213 3059 3022 283 252 125 0 chr2 75811363 75811461 -177445122 - MIR3 SINE MIR -48 160 51 21 0 0 0 chr2 75811715 75811736 -177444847 + GC_rich Low_complexity Low_complexity 1 21 0 442 266 48 0 chr2 75812991 75813115 -177443468 + MIR SINE MIR 44 173 -89 235 308 148 33 chr2 75813500 75813682 -177442901 + L2 LINE L2 2139 2341 -973 225 259 0 0 chr2 75814377 75814431 -177442152 + L3b LINE CR1 1327 1380 -203 362 339 40 17 chr2 75814759 75814933 -177441650 + MIR3 SINE MIR 24 201 -7 247 350 102 43 chr2 75815863 75816326 -177440257 + L2 LINE L2 1267 1756 -1558 597 305 125 14 chr2 75816536 75816953 -177439630 + L2 LINE L2 2180 2642 -672 240 330 44 11 chr2 75817419 75817510 -177439073 + L2 LINE L2 3208 3301 -12 251 293 83 44 chr2 75818870 75819051 -177437532 - MER5A DNA MER1_type -1 188 1 223 273 15 0 chr2 75819105 75819171 -177437412 + MIR SINE MIR 196 262 0 237 237 133 67 chr2 75820905 75821040 -177435543 - MIR3 SINE MIR -62 146 3 4438 108 45 69 chr2 75821354 75822154 -177434429 + LTR1 LTR ERV1 5 785 0 1872 216 38 42 chr2 75822279 75822751 -177433832 + MER70A LTR ERVL 1 470 -2 503 317 75 0 chr2 75823453 75823639 -177432944 + MIR SINE MIR 2 201 -61 984 250 76 0 chr2 75823649 75823937 -177432646 - L2 LINE L2 0 3313 3004 308 271 21 52 chr2 75824354 75824450 -177432133 - MIR SINE MIR -77 185 93 423 0 0 0 chr2 75824560 75824607 -177431976 + (CA)n Simple_repeat Simple_repeat 2 48 0 180 111 0 0 chr2 75824823 75824850 -177431733 + (CCCCCT)n Simple_repeat Simple_repeat 5 31 0 385 158 24 0 chr2 75825146 75825228 -177431355 + CT-rich Low_complexity Low_complexity 1 84 0 2218 110 0 16 chr2 75825228 75825545 -177431038 - AluSx SINE Alu 0 312 1 2111 108 3 7 chr2 75825827 75826132 -177430451 - AluSx SINE Alu -8 304 1 2052 116 7 0 chr2 75827131 75827424 -177429159 - AluSq SINE Alu -18 295 1 446 260 31 8 chr2 75828620 75828747 -177427836 - MIR3 SINE MIR -19 189 60 946 200 47 33 chr2 75829764 75829979 -177426604 + MER20 DNA MER1_type 1 218 -1 238 240 0 0 chr2 75831274 75831324 -177425259 + GA-rich Low_complexity Low_complexity 1 50 0 186 133 0 0 chr2 75831520 75831550 -177425033 + (GA)n Simple_repeat Simple_repeat 1 30 0 328 290 73 86 chr2 75831954 75832257 -177424326 + HsTC2 DNA Tc2 1 299 -1599 * 332 222 59 10 chr2 75832239 75832335 -177424248 + HsTC2 DNA Tc2 468 566 -1332 414 219 21 0 chr2 75832343 75832439 -177424144 + L1ME4a LINE L1 5665 5762 -2046 318 264 61 122 chr2 75832440 75832735 -177423848 + L1ME4a LINE L1 5845 6121 0 528 332 91 24 chr2 75832735 75833075 -177423508 + HsTC2 DNA Tc2 527 889 -1009 670 235 251 32 chr2 75833401 75833777 -177422806 + MLT1L LTR MaLR 143 573 -15 307 313 133 0 chr2 75833785 75833913 -177422670 + L1ME4a LINE L1 5266 5410 -711 307 288 58 60 chr2 75833947 75834132 -177422451 - L1M4 LINE L1 -861 5285 5099 2070 128 7 0 chr2 75834132 75834438 -177422145 + AluSx SINE Alu 5 312 0 307 288 58 60 chr2 75834438 75834618 -177421965 - L1M4 LINE L1 -1047 5099 4920 * 360 308 81 37 chr2 75834609 75834706 -177421877 + L1MC4a LINE L1 5365 5456 -714 2410 90 0 0 chr2 75834706 75835018 -177421565 - AluSx SINE Alu 0 312 1 360 308 81 37 chr2 75835018 75835193 -177421390 + L1MC4a LINE L1 5456 5649 -521 267 295 53 11 chr2 75835208 75835303 -177421280 + MER5A DNA MER1_type 86 184 -5 324 284 153 31 chr2 75835304 75835558 -177421025 + L1MC4a LINE L1 5642 5926 -1882 2217 113 0 0 chr2 75835787 75836089 -177420494 + AluSx SINE Alu 1 302 -10 367 299 54 76 chr2 75836099 75836323 -177420260 + L1ME4a LINE L1 5783 6001 -120 186 227 0 0 chr2 75836550 75836594 -177419989 + CT-rich Low_complexity Low_complexity 4 47 0 270 268 52 10 chr2 75836616 75836713 -177419870 - HAL1 LINE L1 -27 2480 2380 244 304 14 0 chr2 75837411 75837480 -177419103 - L2 LINE L2 -3 3269 3200 785 322 102 28 chr2 75837652 75838112 -177418471 - L3 LINE CR1 -534 1043 550 303 28 0 0 chr2 75838401 75838437 -177418146 + (TG)n Simple_repeat Simple_repeat 1 36 0 248 346 67 10 chr2 75838581 75838685 -177417898 - MIR SINE MIR -65 197 88 470 338 79 37 chr2 75838917 75839349 -177417234 - L2 LINE L2 0 3272 2823 186 227 61 15 chr2 75842309 75842375 -177414208 - MIR SINE MIR -80 128 60 1749 190 85 37 chr2 75843387 75843538 -177413045 - Charlie4a DNA MER1_type -1466 495 353 1979 112 30 13 chr2 75843538 75843842 -177412741 - AluSc SINE Alu 0 309 1 1749 190 85 37 chr2 75843842 75843910 -177412673 - Charlie4a DNA MER1_type -1608 353 290 2111 126 3 3 chr2 75843910 75844220 -177412363 + AluSg SINE Alu 1 310 0 1749 190 85 37 chr2 75844220 75844456 -177412127 - Charlie4a DNA MER1_type -1671 290 17 315 130 0 0 chr2 75845033 75845087 -177411496 + (CA)n Simple_repeat Simple_repeat 2 55 0 209 337 92 5 chr2 75845554 75845750 -177410833 + L2 LINE L2 2827 3039 -233 * 490 253 124 38 chr2 75845734 75845920 -177410663 + MIR SINE MIR 49 250 -12 249 264 11 46 chr2 75845966 75846053 -177410530 + L2 LINE L2 3189 3272 0 553 255 63 42 chr2 75846967 75847206 -177409377 - MIR SINE MIR -13 249 6 352 194 83 19 chr2 75849137 75849245 -177407338 + L2 LINE L2 2594 2708 -606 331 342 161 0 chr2 75849682 75849925 -177406658 + ERVL LTR ERVL 4030 4311 -1453 268 229 21 6 chr2 75850600 75850703 -177405880 + MIR SINE MIR 100 262 0 1416 150 5 0 chr2 75852934 75853154 -177403429 - AluJb SINE Alu -6 306 86 300 317 20 10 chr2 75853699 75853800 -177402783 + L1ME4a LINE L1 5756 5857 -264 543 224 121 0 chr2 75853858 75853974 -177402609 - FLAM_A SINE Alu -3 130 1 2211 95 3 13 chr2 75854009 75854324 -177402259 - AluSx SINE Alu 0 312 1 1098 144 24 0 chr2 75854324 75854491 -177402092 - FAM SINE Alu -4 171 1 357 262 12 0 chr2 75857060 75857144 -177399439 - MER81 DNA DNA -1 113 29 412 321 76 46 chr2 75858168 75858405 -177398178 + L1ME4a LINE L1 5870 6113 -8 220 195 0 0 chr2 75858646 75858687 -177397896 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 21 0 0 0 chr2 75859152 75859173 -177397410 + AT_rich Low_complexity Low_complexity 1 21 0 262 319 101 41 chr2 75859252 75859421 -177397162 + MIR3 SINE MIR 8 186 -22 328 308 83 41 chr2 75860420 75860589 -177395994 - MIR SINE MIR -66 196 21 333 0 0 0 chr2 75860747 75860784 -177395799 + (CA)n Simple_repeat Simple_repeat 1 37 0 217 349 38 8 chr2 75861560 75861692 -177394891 + MIR SINE MIR 8 127 -81 527 309 58 10 chr2 75861809 75862016 -177394567 + MIR SINE MIR 40 256 -6 546 305 92 39 chr2 75862359 75862716 -177393867 + MLT1H LTR MaLR 2 377 -172 1927 120 7 27 chr2 75862774 75863074 -177393509 + AluSq SINE Alu 4 297 -16 335 283 9 35 chr2 75863814 75863927 -177392656 + L2 LINE L2 2964 3073 -199 989 237 103 111 chr2 75866555 75867052 -177389531 + MLT1J LTR MaLR 19 511 0 775 307 113 53 chr2 75867054 75867536 -177389047 + L1MC/D LINE L1 2725 3240 -2906 1632 144 0 4 chr2 75867536 75867786 -177388797 - AluJo SINE Alu -63 249 1 775 307 113 53 chr2 75867786 75867808 -177388775 + L1MC/D LINE L1 3240 3259 -2887 557 291 100 23 chr2 75867826 75868419 -177388164 + L1MC/D LINE L1 5106 5752 -744 495 0 0 0 chr2 75869081 75869136 -177387447 + (CA)n Simple_repeat Simple_repeat 2 56 0 452 310 96 67 chr2 75869654 75869838 -177386745 + L1M4 LINE L1 2204 2381 -3765 342 0 0 0 chr2 75869838 75869876 -177386707 + (TG)n Simple_repeat Simple_repeat 2 39 0 452 310 96 67 chr2 75869876 75870097 -177386486 + L1M4 LINE L1 2381 2621 -3525 30 45 0 0 chr2 75870105 75870149 -177386434 + AT_rich Low_complexity Low_complexity 1 44 0 509 277 70 8 chr2 75870400 75870642 -177385941 - L1ME3A LINE L1 -222 5948 5692 1379 272 136 57 chr2 75870662 75871915 -177384668 - L1ME3A LINE L1 -1163 4983 3603 916 133 0 22 chr2 75871915 75872050 -177384533 - FLAM_C SINE Alu 0 133 2 1379 272 136 57 chr2 75872050 75872219 -177384364 - L1ME3A LINE L1 -2543 3603 3449 1113 154 0 6 chr2 75872222 75872391 -177384192 + FRAM SINE Alu 1 168 -8 394 266 65 13 chr2 75872405 75872634 -177383949 - L1ME3A LINE L1 -2703 3443 3203 * 704 222 127 18 chr2 75872633 75872854 -177383729 + L1MC4a LINE L1 5635 5879 -1929 2019 125 7 0 chr2 75872855 75873157 -177383426 + AluSx SINE Alu 1 304 0 1233 203 175 6 chr2 75873213 75873562 -177383021 - MER47B DNA MER2_type 0 418 11 2180 237 131 14 chr2 75873570 75874359 -177382224 + L1MC4a LINE L1 5900 6780 -1028 1658 168 36 14 chr2 75874375 75874655 -177381928 + AluJo SINE Alu 23 308 -4 190 143 0 71 chr2 75874661 75874717 -177381866 + (GAAAA)n Simple_repeat Simple_repeat 4 55 0 578 211 82 68 chr2 75874717 75875011 -177381572 + L1MC4 LINE L1 6855 7152 -890 694 256 17 11 chr2 75875033 75875309 -177381274 - L1MC4a LINE L1 -404 5774 5542 1605 208 51 7 chr2 75875356 75875769 -177380814 + L1ME3A LINE L1 5636 6066 -104 231 114 0 0 chr2 75875774 75875809 -177380774 + tRNA-Phe-TTC tRNA tRNA 1 35 -41 2573 68 0 0 chr2 75875850 75876159 -177380424 - AluY SINE Alu -2 309 1 359 219 49 0 chr2 75876161 75876243 -177380340 + L1ME3A LINE L1 6077 6162 -8 2094 109 0 4 chr2 75877660 75877934 -177378649 + AluSx SINE Alu 29 301 -11 204 318 165 0 chr2 75879286 75879371 -177377212 + L2 LINE L2 3200 3298 -15 226 265 0 0 chr2 75879886 75879935 -177376648 + MER5B DNA MER1_type 1 49 -129 413 216 94 12 chr2 75880083 75880222 -177376361 + MIR SINE MIR 100 252 -10 278 231 82 37 chr2 75880375 75880509 -177376074 - MER104 DNA Tc2 -3 177 38 1905 80 0 0 chr2 75880525 75880751 -177375832 - AluSg SINE Alu -84 226 1 1693 169 14 3 chr2 75880804 75881100 -177375483 + AluJo SINE Alu 1 299 -13 270 237 61 92 chr2 75881747 75881878 -177374705 + L2 LINE L2 3142 3268 -4 304 339 50 50 chr2 75881916 75882096 -177374487 + HAL1 LINE L1 1 180 -2327 767 204 69 100 chr2 75882476 75882556 -177374027 + MER45C DNA AcHobo 2 83 -870 2139 96 0 11 chr2 75882556 75882837 -177373746 - AluSx SINE Alu -11 301 24 767 204 69 100 chr2 75882837 75882872 -177373711 + MER45C DNA AcHobo 83 118 -835 6495 132 71 26 chr2 75882872 75883145 -177373438 + Tigger3b DNA MER2_type 1 260 -2768 2444 93 6 0 chr2 75883145 75883456 -177373127 - AluSq SINE Alu 0 313 1 6495 132 71 26 chr2 75883456 75884082 -177372501 + Tigger3b DNA MER2_type 260 968 -2060 2026 142 3 7 chr2 75884082 75884391 -177372192 - AluJo SINE Alu -4 308 1 6495 132 71 26 chr2 75884391 75884668 -177371915 + Tigger3b DNA MER2_type 968 1231 0 767 204 69 100 chr2 75884668 75884811 -177371772 + MER45C DNA AcHobo 118 253 -700 799 296 47 11 chr2 75884845 75885119 -177371464 + MER45C DNA AcHobo 670 953 0 336 232 170 18 chr2 75885194 75885306 -177371277 + HAL1 LINE L1 911 1039 -1468 331 264 44 0 chr2 75885310 75885401 -177371182 + MIR SINE MIR 50 144 -118 500 226 23 8 chr2 75885438 75885571 -177371012 + MLT1J2 LTR MaLR 51 185 -265 266 296 23 0 chr2 75885674 75885762 -177370821 + MLT1J2 LTR MaLR 360 449 -1 199 325 39 0 chr2 75885967 75886044 -177370539 - MIR SINE MIR -90 118 39 693 144 4 212 chr2 75886098 75886219 -177370364 - MIR SINE MIR -64 198 148 1934 166 3 3 chr2 75886219 75886527 -177370056 + AluJb SINE Alu 1 308 -4 693 144 4 212 chr2 75886527 75886641 -177369942 - MIR SINE MIR -114 148 12 277 253 101 0 chr2 75886673 75886752 -177369831 - L1MC4a LINE L1 -1906 5902 5816 189 107 0 0 chr2 75886780 75886808 -177369775 + (TA)n Simple_repeat Simple_repeat 2 29 0 773 138 73 0 chr2 75886808 75886931 -177369652 - FLAM_C SINE Alu -10 133 2 1144 171 16 34 chr2 75886969 75887233 -177369350 - L1MB3 LINE L1 -72 6111 5852 757 245 103 65 chr2 75887603 75887971 -177368612 + MLT1J2 LTR MaLR 69 450 0 227 264 66 108 chr2 75888207 75888374 -177368209 + MIR3 SINE MIR 38 197 -11 528 253 89 0 chr2 75889478 75889624 -177366959 + MIR SINE MIR 39 197 -65 1578 240 60 58 chr2 75889631 75890220 -177366363 - L2 LINE L2 0 3313 2728 1108 181 23 9 chr2 75890220 75890436 -177366147 + MER20 DNA MER1_type 1 219 0 1578 240 60 58 chr2 75890436 75890569 -177366014 - L2 LINE L2 -585 2728 2597 266 368 68 8 chr2 75891124 75891374 -177365209 + L2 LINE L2 2611 2875 -439 622 280 58 39 chr2 75891420 75891627 -177364956 + MIR SINE MIR 46 256 -6 2436 101 0 0 chr2 75891920 75892226 -177364357 - AluSx SINE Alu -6 306 1 1745 229 103 21 chr2 75893805 75894368 -177362215 + HAL1 LINE L1 1159 1767 -740 2679 139 8 28 chr2 75894447 75894916 -177361667 - Tigger3(Golem) DNA MER2_type -1 3028 2569 811 149 108 20 chr2 75894916 75895064 -177361519 + FRAM SINE Alu 1 153 -23 1167 85 108 31 chr2 75895064 75895322 -177361261 - Tigger3(Golem) DNA MER2_type -468 2561 2284 529 163 0 122 chr2 75895322 75895366 -177361217 - Tigger3(Golem) DNA MER2_type -494 108 60 2204 111 0 3 chr2 75895366 75895654 -177360929 - AluSx SINE Alu -25 287 1 529 163 0 122 chr2 75895654 75895732 -177360851 - Tigger3(Golem) DNA MER2_type -542 60 1 674 223 102 110 chr2 75895773 75896203 -177360380 + HAL1 LINE L1 2006 2438 -69 360 0 0 0 chr2 75896203 75896243 -177360340 + (TTTTA)n Simple_repeat Simple_repeat 3 42 0 2131 108 7 3 chr2 75896250 75896537 -177360046 - AluSq SINE Alu -25 288 1 674 223 102 110 chr2 75896537 75896596 -177359987 + HAL1 LINE L1 2444 2499 -8 1068 179 63 0 chr2 75896859 75897049 -177359534 + MER63A DNA MER1_type 1 202 -8 301 321 81 45 chr2 75897526 75897772 -177358811 + L1MC4a LINE L1 5798 6052 -1756 1945 109 91 0 chr2 75897836 75898110 -177358473 + AluSg SINE Alu 1 299 -11 1825 183 13 7 chr2 75898126 75898427 -177358156 - AluJb SINE Alu -9 303 1 398 257 114 0 chr2 75898617 75898757 -177357826 + L1ME3A LINE L1 5674 5829 -341 2374 113 0 0 chr2 75898759 75899069 -177357514 + AluSg SINE Alu 1 310 0 1050 165 0 0 chr2 75899069 75899227 -177357356 + AluJb SINE Alu 134 291 -21 1641 148 80 8 chr2 75899229 75899523 -177357060 + AluSx SINE Alu 1 313 0 218 266 49 25 chr2 75900311 75900413 -177356170 - MIR SINE MIR -107 101 2 263 242 91 50 chr2 75901572 75901671 -177354912 - MIR SINE MIR -76 132 30 2291 117 0 0 chr2 75902553 75902851 -177353732 + AluSx SINE Alu 1 298 -14 574 149 21 11 chr2 75902981 75903075 -177353508 + AluJb SINE Alu 159 253 -59 201 167 0 0 chr2 75903272 75903308 -177353275 + T-rich Low_complexity Low_complexity 1 36 0 254 206 0 61 chr2 75903345 75903371 -177353212 + L1MC4 LINE L1 6581 6607 -1435 2375 89 23 0 chr2 75903371 75903673 -177352910 + AluSg SINE Alu 1 309 -1 254 206 0 61 chr2 75903673 75903777 -177352806 + L1MC4 LINE L1 6607 6703 -1339 294 206 0 0 chr2 75903777 75903840 -177352743 + (TA)n Simple_repeat Simple_repeat 1 63 0 2363 130 28 0 chr2 75903876 75904230 -177352353 + THE1B LTR MaLR 1 364 0 403 247 154 24 chr2 75904239 75904486 -177352097 + L1ME4a LINE L1 5603 5881 -240 259 274 0 28 chr2 75904528 75904634 -177351949 + (TA)n Simple_repeat Simple_repeat 1 103 0 2235 110 21 0 chr2 75904651 75904942 -177351641 - AluSx SINE Alu -15 297 1 274 227 0 45 chr2 75904971 75905059 -177351524 + L1ME4a LINE L1 5988 6071 -50 289 302 12 23 chr2 75905079 75905165 -177351418 - L1MC4a LINE L1 -460 7348 7264 * 362 252 92 0 chr2 75905162 75905281 -177351302 - L1ME LINE L1 -399 5722 5593 * 441 282 23 17 chr2 75905277 75905451 -177351132 - L1MC4 LINE L1 -702 7340 7166 1319 174 64 52 chr2 75905509 75905702 -177350881 - MLT1A1 LTR MaLR -17 348 148 1796 140 61 11 chr2 75905702 75905981 -177350602 - AluJb SINE Alu -19 293 1 1319 174 64 52 chr2 75905981 75906131 -177350452 - MLT1A1 LTR MaLR -217 148 1 4147 211 71 61 chr2 75906136 75906814 -177349769 - MLT1A1-int LTR MaLR -6 1645 975 276 30 0 0 chr2 75906814 75906847 -177349736 + (CA)n Simple_repeat Simple_repeat 1 33 0 4147 211 71 61 chr2 75906847 75907683 -177348900 - MLT1A1-int LTR MaLR -676 975 113 2462 84 0 0 chr2 75907683 75907981 -177348602 - AluSg1 SINE Alu -11 298 1 4147 211 71 61 chr2 75907981 75908096 -177348487 - MLT1A1-int LTR MaLR -1538 113 1 1151 163 151 51 chr2 75908096 75908427 -177348156 - MLT1A1 LTR MaLR 0 365 2 1596 241 119 2 chr2 75908428 75908765 -177347818 - L1MC4a LINE L1 -831 6977 6560 435 38 0 0 chr2 75908765 75908818 -177347765 + (TG)n Simple_repeat Simple_repeat 1 53 0 1596 241 119 2 chr2 75908818 75908983 -177347600 - L1MC4a LINE L1 -1248 6560 6416 2184 125 13 0 chr2 75909321 75909624 -177346959 + AluSx SINE Alu 1 307 -5 708 257 72 32 chr2 75911693 75911942 -177344641 + MIR SINE MIR 1 259 -3 927 193 42 87 chr2 75911945 75912011 -177344572 + AluSq SINE Alu 1 68 -245 2208 89 6 62 chr2 75912011 75912335 -177344248 - AluY SINE Alu 0 311 6 1612 143 8 0 chr2 75912344 75912588 -177343995 + AluSx SINE Alu 64 309 -3 927 193 42 87 chr2 75912588 75912776 -177343807 + AluSq SINE Alu 76 253 -60 225 333 49 10 chr2 75913981 75914083 -177342500 + L2 LINE L2 3197 3302 -11 188 236 171 65 chr2 75914620 75914743 -177341840 + L2 LINE L2 3161 3296 -17 282 116 0 0 chr2 75917306 75917349 -177339234 + (CCTG)n Simple_repeat Simple_repeat 3 45 0 274 275 178 61 chr2 75917926 75918106 -177338477 + L2 LINE L2 1459 1617 -1697 463 132 104 75 chr2 75918106 75918212 -177338371 + MER81 DNA DNA 4 112 -2 274 275 178 61 chr2 75918212 75918587 -177337996 + L2 LINE L2 1617 2079 -1235 201 292 0 28 chr2 75918643 75918715 -177337868 + L2 LINE L2 2230 2299 -1015 479 269 66 24 chr2 75919160 75919327 -177337256 + L2 LINE L2 2936 3109 -163 252 250 240 50 chr2 75920134 75920234 -177336349 + L2 LINE L2 3137 3255 -17 327 49 0 0 chr2 75922630 75922671 -177333912 + (TCC)n Simple_repeat Simple_repeat 1 41 0 225 196 0 0 chr2 75923019 75923070 -177333513 + (CGG)n Simple_repeat Simple_repeat 2 52 0 1750 120 120 0 chr2 75923580 75923847 -177332736 - AluSg SINE Alu -11 299 1 255 271 219 26 chr2 75926118 75926310 -177330273 - L3 LINE CR1 -28 1549 1321 306 67 0 0 chr2 75930299 75930344 -177326239 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 782 120 19 0 chr2 75931468 75931576 -177325007 - AluSp SINE Alu -202 111 2 254 390 19 0 chr2 75932770 75932929 -177323654 + MER20B DNA MER1_type 17 178 -605 21 57 0 0 chr2 75933399 75933434 -177323149 + AT_rich Low_complexity Low_complexity 1 35 0 305 222 16 0 chr2 75935065 75935128 -177321455 - MIR SINE MIR -116 146 83 184 328 16 16 chr2 75935181 75935242 -177321341 + L3 LINE CR1 1509 1569 -8 405 0 0 0 chr2 75935400 75935445 -177321138 + (TG)n Simple_repeat Simple_repeat 2 46 0 277 223 132 32 chr2 75935615 75935758 -177320825 + MIR3 SINE MIR 11 165 -71 9893 59 9 5 chr2 75936677 75937946 -177318637 - L1P LINE L1 -858 5288 4014 26 64 0 0 chr2 75938467 75938514 -177318069 + AT_rich Low_complexity Low_complexity 1 47 0 23 0 0 0 chr2 75939123 75939146 -177317437 + AT_rich Low_complexity Low_complexity 1 23 0 481 292 96 12 chr2 75940019 75940259 -177316324 + MIR SINE MIR 2 261 -1 322 322 180 30 chr2 75940459 75940754 -177315829 - L2 LINE L2 -2954 360 22 427 281 39 46 chr2 75942053 75942206 -177314377 - MIR SINE MIR -71 191 40 502 256 22 0 chr2 75942434 75942571 -177314012 - MLT1D LTR MaLR -352 153 14 291 214 0 0 chr2 75942694 75942764 -177313819 + (CA)n Simple_repeat Simple_repeat 2 71 0 21 0 0 0 chr2 75942900 75942921 -177313662 + AT_rich Low_complexity Low_complexity 1 21 0 217 224 0 20 chr2 75942975 75943024 -177313559 + CT-rich Low_complexity Low_complexity 3 50 0 2331 26 4 4 chr2 75943174 75943440 -177313143 + AluYa5 SINE Alu 16 281 -30 248 0 31 0 chr2 75943505 75943537 -177313046 + (TA)n Simple_repeat Simple_repeat 2 34 0 1638 187 28 3 chr2 75944306 75944595 -177311988 - AluJb SINE Alu -16 296 1 2049 283 57 111 chr2 75944595 75946063 -177310520 - L1M1 LINE L1 -5359 2206 16 186 43 0 0 chr2 75946078 75946101 -177310482 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 413 355 52 17 chr2 75946210 75946497 -177310086 - L2 LINE L2 -907 2407 2111 190 382 64 9 chr2 75946650 75946760 -177309823 - MIR SINE MIR -101 161 46 294 29 0 0 chr2 75947150 75947185 -177309398 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 267 103 0 162 chr2 75949430 75949498 -177307085 + MADE1 DNA Mariner 24 80 0 656 284 5 56 chr2 75949529 75949744 -177306839 + MER82 DNA MER2_type 444 647 -6 228 196 0 0 chr2 75949759 75949805 -177306778 + LTR66 LTR ERVL 394 439 -171 243 0 0 0 chr2 75949811 75949838 -177306745 + (CA)n Simple_repeat Simple_repeat 2 28 0 1705 120 15 8 chr2 75949867 75950126 -177306457 - AluSx SINE Alu -14 298 38 255 256 11 11 chr2 75951548 75951638 -177304945 + (TA)n Simple_repeat Simple_repeat 2 91 0 25 31 0 0 chr2 75952301 75952333 -177304250 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr2 75952801 75952824 -177303759 + AT_rich Low_complexity Low_complexity 1 23 0 2499 131 3 21 chr2 75953710 75953786 -177302797 + THE1C LTR MaLR 1 77 -298 5073 93 14 5 chr2 75953786 75954440 -177302143 - PABL_A LTR ERV1 0 660 1 2499 131 3 21 chr2 75954440 75954745 -177301838 + THE1C LTR MaLR 77 375 0 1907 140 35 111 chr2 75954749 75955217 -177301366 + THE1C-int LTR MaLR 5 469 -1111 2000 130 10 7 chr2 75955421 75955722 -177300861 - AluSx SINE Alu -10 302 1 388 270 124 36 chr2 75955962 75956204 -177300379 - L1MC4a LINE L1 -206 5915 5642 282 295 53 11 chr2 75956205 75956300 -177300283 - MER5A DNA MER1_type -5 184 86 277 335 89 28 chr2 75956322 75956490 -177300093 - L1MC4a LINE L1 -2169 5639 5458 2315 102 0 0 chr2 75956490 75956784 -177299799 + AluSg SINE Alu 1 294 -16 273 353 86 63 chr2 75957064 75957446 -177299137 + L2 LINE L2 2216 2606 -708 211 236 11 11 chr2 75957511 75957600 -177298983 + GA-rich Low_complexity Low_complexity 2 90 0 1806 260 63 26 chr2 75958451 75959446 -177297137 - L1MDa LINE L1 -3087 3453 2417 3548 243 52 14 chr2 75959468 75960849 -177295734 - L1PA3 LINE L1 0 6155 4716 211 351 21 21 chr2 75961030 75961124 -177295459 - MIR3 SINE MIR -52 156 63 24 32 0 0 chr2 75961159 75961190 -177295393 + AT_rich Low_complexity Low_complexity 1 31 0 23 78 0 0 chr2 75961262 75961313 -177295270 + AT_rich Low_complexity Low_complexity 1 51 0 190 305 73 0 chr2 75962417 75962499 -177294084 - L3 LINE CR1 -194 1383 1296 28 71 0 0 chr2 75962741 75962797 -177293786 + AT_rich Low_complexity Low_complexity 1 56 0 242 210 0 0 chr2 75963020 75963082 -177293501 + A-rich Low_complexity Low_complexity 1 62 0 40 87 0 0 chr2 75963205 75963308 -177293275 + AT_rich Low_complexity Low_complexity 1 103 0 395 326 47 42 chr2 75963396 75963611 -177292972 + MIR SINE MIR 2 217 -45 1187 311 65 16 chr2 75963826 75964396 -177292187 + L3 LINE CR1 613 1210 -367 958 314 39 3 chr2 75964403 75964740 -177291843 + L2 LINE L2 2015 2363 -951 24 0 0 0 chr2 75964810 75964834 -177291749 + AT_rich Low_complexity Low_complexity 1 24 0 184 371 34 34 chr2 75964865 75964954 -177291629 + L3 LINE CR1 1431 1519 -58 217 240 60 0 chr2 75965079 75965129 -177291454 - L2 LINE L2 -16 3297 3245 3892 239 28 18 chr2 75965338 75966539 -177290044 + L1PA16 LINE L1 3396 4614 -2951 312 27 0 0 chr2 75966952 75966989 -177289594 + (GGA)n Simple_repeat Simple_repeat 2 38 0 4688 204 39 10 chr2 75968040 75969949 -177286634 + L1PA16 LINE L1 5590 7582 -3 25 0 0 0 chr2 75970049 75970074 -177286509 + AT_rich Low_complexity Low_complexity 1 25 0 350 243 43 3 chr2 75970381 75970490 -177286093 + MLT1J1 LTR MaLR 85 196 -254 2143 71 7 3 chr2 75972994 75973290 -177283293 - L1PA7 LINE L1 0 6154 5858 1777 93 28 21 chr2 75974187 75974476 -177282107 - AluY SINE Alu -20 291 1 1630 184 74 11 chr2 75974476 75974759 -177281824 - AluJb SINE Alu -11 301 1 283 192 50 21 chr2 75974820 75974952 -177281631 + L1ME LINE L1 5298 5438 -683 565 275 20 7 chr2 75975026 75975175 -177281408 - MIR SINE MIR -76 186 36 1926 178 51 28 chr2 75975445 75975958 -177280625 - MLT2A2 LTR ERVL -14 540 1 776 107 0 8 chr2 75976353 75976475 -177280108 + (GGAA)n Simple_repeat Simple_repeat 2 122 0 470 280 150 29 chr2 75977985 75978299 -177278284 + L3 LINE CR1 1142 1493 -84 387 389 79 5 chr2 75978318 75978534 -177278049 + L3 LINE CR1 1261 1492 -85 793 229 81 18 chr2 75978689 75978912 -177277671 - MIR SINE MIR -21 241 5 267 227 0 0 chr2 75979314 75979380 -177277203 + GA-rich Low_complexity Low_complexity 4 69 0 322 237 0 54 chr2 75979906 75979999 -177276584 - MIR3 SINE MIR -7 201 114 3480 81 15 0 chr2 75983722 75984191 -177272392 + L1PA8A LINE L1 5656 6131 0 225 154 0 0 chr2 75984838 75984877 -177271706 + T-rich Low_complexity Low_complexity 1 39 0 469 224 9 0 chr2 75985243 75985350 -177271233 - MER94 DNA DNA -21 113 6 288 288 122 7 chr2 75985826 75985965 -177270618 - L1MC/D LINE L1 -2039 5769 5615 7074 51 0 18 chr2 75987652 75989004 -177267579 - L1PA4 LINE L1 -1 6154 4815 231 384 45 11 chr2 75989152 75989329 -177267254 + MIR SINE MIR 79 261 -1 21 57 0 0 chr2 75989773 75989808 -177266775 + AT_rich Low_complexity Low_complexity 1 35 0 775 261 37 18 chr2 75989829 75990047 -177266536 + MIR SINE MIR 41 262 0 247 313 61 25 chr2 75990801 75990964 -177265619 - LTR16B LTR ERVL -162 302 134 308 355 92 0 chr2 75991478 75991751 -177264832 - HERVL LTR ERVL -605 5049 4752 227 311 184 0 chr2 75992013 75992116 -177264467 - MIR SINE MIR -116 146 25 998 256 23 44 chr2 75992870 75993257 -177263326 - MER20B DNA MER1_type -388 395 17 820 191 51 33 chr2 75994363 75994578 -177262005 + MLT1C LTR MaLR 7 225 -242 1227 216 0 24 chr2 75994578 75994865 -177261718 + MLT1C LTR MaLR 188 467 0 412 320 115 15 chr2 75996632 75997022 -177259561 + ERVL LTR ERVL 4713 5141 -623 1251 237 31 20 chr2 75997698 75998065 -177258518 + MLT1D LTR MaLR 127 370 -4 395 302 108 55 chr2 75999140 75999537 -177257046 + MLT1J2 LTR MaLR 33 450 0 701 262 6 6 chr2 75999542 75999710 -177256873 - MIR SINE MIR -87 175 8 2037 139 7 0 chr2 76000172 76000473 -177256110 + AluSx SINE Alu 1 303 -9 229 305 136 7 chr2 76002733 76002887 -177253696 + LTR16A LTR ERVL 277 450 0 702 222 155 4 chr2 76003122 76003360 -177253223 - MLT1E1 LTR MaLR -1 653 351 467 94 0 0 chr2 76003404 76003468 -177253115 - MLT1E1 LTR MaLR -391 263 200 380 181 14 0 chr2 76003468 76003540 -177253043 - MLT1E1 LTR MaLR -416 238 166 2416 68 7 0 chr2 76005115 76005424 -177251159 - AluY SINE Alu 0 311 1 379 227 29 87 chr2 76005825 76005997 -177250586 + MIR SINE MIR 76 237 -25 24 32 0 0 chr2 76006225 76006256 -177250327 + AT_rich Low_complexity Low_complexity 1 31 0 187 274 210 40 chr2 76006504 76006628 -177249955 + MIR SINE MIR 105 249 -13 12346 46 2 4 chr2 76007663 76009409 -177247174 + L1P LINE L1 644 2513 -3633 22990 26 0 0 chr2 76009509 76012562 -177244021 - L1P1 LINE L1 -600 5555 2502 215 300 62 12 chr2 76012753 76012833 -177243750 + MIR SINE MIR 120 203 -59 392 143 71 45 chr2 76012834 76012946 -177243637 + MER89 LTR ERV1 2 116 -443 2197 211 16 21 chr2 76013433 76013945 -177242638 + MER89 LTR ERV1 51 559 0 1879 143 143 13 chr2 76014026 76014405 -177242178 + MSTA LTR MaLR 1 428 0 2329 61 11 0 chr2 76014681 76014991 -177241592 - AluY SINE Alu 0 313 1 220 239 15 15 chr2 76015649 76015716 -177240867 + CT-rich Low_complexity Low_complexity 4 70 0 2927 195 45 6 chr2 76016254 76016900 -177239683 - L1PB4 LINE L1 0 6156 5486 284 347 77 39 chr2 76016931 76017376 -177239207 + L2 LINE L2 2585 3052 -220 804 205 68 0 chr2 76018057 76018218 -177238365 - MER5A DNA MER1_type 0 189 18 229 280 32 0 chr2 76018467 76018560 -177238023 + MLT1L LTR MaLR 518 613 -2 408 307 96 6 chr2 76020896 76021062 -177235521 + MIR3 SINE MIR 32 207 -1 254 389 60 28 chr2 76021930 76022146 -177234437 - MIR SINE MIR -38 224 2 240 366 9 36 chr2 76022884 76022996 -177233587 - L2 LINE L2 -828 2486 2378 926 205 87 111 chr2 76024246 76024289 -177232294 - MLT2D LTR ERVL 0 414 372 393 22 0 0 chr2 76024289 76024335 -177232248 + (TAGA)n Simple_repeat Simple_repeat 3 48 0 926 205 87 111 chr2 76024335 76024715 -177231868 - MLT2D LTR ERVL -42 372 1 292 212 61 0 chr2 76025661 76025727 -177230856 - L2 LINE L2 0 3272 3203 248 339 131 34 chr2 76025735 76025971 -177230612 - L2 LINE L2 -814 2500 2242 2032 207 125 2 chr2 76026011 76026581 -177230002 - LTR65 LTR ERV1 -29 640 1 446 199 106 43 chr2 76027006 76027147 -177229436 - MER5B DNA MER1_type 0 178 29 1894 181 0 0 chr2 76027506 76027804 -177228779 - AluJo SINE Alu -14 298 1 1692 152 11 4 chr2 76027829 76028106 -177228477 - AluSx SINE Alu -22 290 12 670 268 125 27 chr2 76030059 76030344 -177226239 + MLT1E LTR MaLR 308 584 -9 897 253 136 82 chr2 76030912 76031433 -177225150 - MLT1H LTR MaLR 0 549 1 490 316 78 42 chr2 76031496 76031689 -177224894 - MIR3 SINE MIR -4 204 5 25 31 0 0 chr2 76031730 76031762 -177224821 + AT_rich Low_complexity Low_complexity 1 32 0 229 170 19 19 chr2 76032277 76032330 -177224253 + (TTG)n Simple_repeat Simple_repeat 2 54 0 542 310 108 30 chr2 76032426 76032761 -177223822 - MLT1I LTR MaLR -7 402 42 4309 33 6 2 chr2 76032864 76033386 -177223197 + L1PA3 LINE L1 5632 6155 0 1735 192 0 3 chr2 76034328 76034630 -177221953 - AluJb SINE Alu -8 304 4 2161 149 28 6 chr2 76034885 76035241 -177221342 - THE1B LTR MaLR 0 364 1 10136 104 14 60 chr2 76035241 76036894 -177219689 - THE1B-int LTR MaLR 0 1580 4 2318 143 20 0 chr2 76036896 76037253 -177219330 - THE1B LTR MaLR 0 364 1 238 310 28 0 chr2 76038142 76038213 -177218370 + L2 LINE L2 3236 3308 -5 181 250 77 19 chr2 76038658 76038710 -177217873 + L2 LINE L2 3259 3313 0 345 303 174 13 chr2 76039980 76040135 -177216448 - MIR SINE MIR -5 257 78 731 243 27 5 chr2 76040138 76040323 -177216260 - MER5A DNA MER1_type 0 189 1 205 242 20 121 chr2 76040417 76040516 -177216067 - MIR SINE MIR -102 160 72 301 26 0 0 chr2 76042965 76043004 -177213579 + MADE1 DNA Mariner 41 79 -1 871 124 0 51 chr2 76044311 76044448 -177212135 - FLAM_C SINE Alu -13 130 1 337 268 37 0 chr2 76044502 76044584 -177211999 - L2 LINE L2 -2 3270 3186 212 370 14 0 chr2 76044682 76044755 -177211828 - MIR SINE MIR -68 140 67 302 303 48 28 chr2 76044771 76044916 -177211667 - LTR33 LTR ERVL 0 521 374 427 128 13 13 chr2 76044921 76044999 -177211584 + MADE1 DNA Mariner 3 80 0 447 308 16 22 chr2 76045074 76045259 -177211324 - LTR33 LTR ERVL -278 243 60 2911 18 0 0 chr2 76046075 76046409 -177210174 + L1PA2 LINE L1 5822 6155 0 826 268 99 6 chr2 76046435 76046749 -177209834 + ERVL-E LTR ERVL 5094 5436 -328 356 281 0 11 chr2 76047057 76047146 -177209437 + MLT2E LTR ERVL 32 119 -509 274 255 0 69 chr2 76047366 76047468 -177209115 + MLT1H LTR MaLR 453 547 -2 330 206 15 0 chr2 76047537 76047605 -177208978 + Tigger2 DNA MER2_type 1 69 -2649 254 290 0 0 chr2 76047829 76047898 -177208685 - MIR SINE MIR -85 177 109 229 163 0 0 chr2 76048199 76048242 -177208341 + Tigger2 DNA MER2_type 2290 2332 -386 226 290 118 11 chr2 76048355 76048448 -177208135 + L2 LINE L2 3166 3268 -4 352 343 230 10 chr2 76048559 76048763 -177207820 + MIR SINE MIR 3 251 -11 256 321 0 0 chr2 76049242 76049326 -177207257 + MIR SINE MIR 109 192 -70 257 314 29 19 chr2 76049374 76049479 -177207104 + L2 LINE L2 2712 2817 -497 6932 59 2 6 chr2 76049609 76050555 -177206028 + L1PA6 LINE L1 5211 6153 -1 1183 254 47 24 chr2 76050555 76051130 -177205453 + Tigger4(Zombi) DNA MER2_type 1786 2373 -358 294 280 151 0 chr2 76051668 76051761 -177204822 - MLT1E1 LTR MaLR -547 107 1 374 320 89 36 chr2 76052076 76052323 -177204260 + MIR SINE MIR 3 262 0 311 279 66 22 chr2 76052705 76052841 -177203742 + MIR3 SINE MIR 65 206 -2 246 298 32 65 chr2 76053305 76053429 -177203154 + MIR SINE MIR 86 205 -57 1609 116 22 64 chr2 76053886 76054197 -177202386 + LTR24C LTR ERV1 2 299 -336 1385 163 170 14 chr2 76054208 76054490 -177202093 - MER1B DNA MER1_type -8 331 6 1368 116 59 13 chr2 76054501 76054790 -177201793 + LTR24C LTR ERV1 305 626 -9 294 258 45 0 chr2 76054792 76054881 -177201702 + MIR SINE MIR 59 151 -111 217 291 29 48 chr2 76055126 76055229 -177201354 - MIR SINE MIR -21 241 141 184 342 107 48 chr2 76055346 76055615 -177200968 - L2 LINE L2 -995 2319 2067 3161 186 5 21 chr2 76055615 76056229 -177200354 - MER6A DNA MER2_type -1 604 1 184 342 107 48 chr2 76056229 76056541 -177200042 - L2 LINE L2 -1247 2067 1704 285 306 66 16 chr2 76056606 76056727 -177199856 + L3 LINE CR1 1031 1157 -420 378 199 51 45 chr2 76056750 76056926 -177199657 + (CATA)n Simple_repeat Simple_repeat 4 180 0 267 54 0 0 chr2 76057054 76057091 -177199492 + (CA)n Simple_repeat Simple_repeat 2 38 0 192 307 10 13 chr2 76057513 76057605 -177198978 + MER5A DNA MER1_type 63 187 -2 189 0 0 0 chr2 76058825 76058846 -177197737 + (CA)n Simple_repeat Simple_repeat 2 22 0 218 320 39 0 chr2 76058936 76059014 -177197569 + MIR SINE MIR 119 199 -63 517 267 70 113 chr2 76059045 76059442 -177197141 + L2 LINE L2 2934 3313 0 184 358 84 11 chr2 76059493 76059588 -177196995 - MER5B DNA MER1_type -27 151 50 236 291 51 63 chr2 76060263 76060421 -177196162 - MER5A DNA MER1_type -1 188 33 405 380 98 17 chr2 76061287 76061634 -177194949 - L2 LINE L2 -38 3234 2860 430 208 50 10 chr2 76062021 76062122 -177194461 - MER45 DNA AcHobo -61 117 13 830 260 28 28 chr2 76063260 76063510 -177193073 - MIR SINE MIR 0 262 13 21 57 0 0 chr2 76063588 76063623 -177192960 + AT_rich Low_complexity Low_complexity 1 35 0 247 196 0 22 chr2 76063911 76063957 -177192626 - L2 LINE L2 -4 3268 3224 303 287 167 0 chr2 76064538 76064646 -177191937 + L2 LINE L2 3188 3313 0 400 305 100 25 chr2 76064895 76065095 -177191488 - MIR SINE MIR -42 220 6 294 319 25 13 chr2 76065745 76065902 -177190681 + (TCTCTG)n Simple_repeat Simple_repeat 2 160 0 225 376 6 6 chr2 76065929 76066094 -177190489 + CT-rich Low_complexity Low_complexity 2 166 0 421 307 13 27 chr2 76066285 76066435 -177190148 - MIR3 SINE MIR -7 201 54 395 216 73 103 chr2 76067204 76067408 -177189175 + MER106A DNA MER1_type 2 199 -37 539 205 9 0 chr2 76069260 76069372 -177187211 + MIR SINE MIR 86 198 -64 2364 171 28 2 chr2 76069376 76069849 -177186734 - L1MA8 LINE L1 -936 5210 4726 * 4486 158 43 27 chr2 76069846 76070001 -177186582 + L1MA8 LINE L1 5177 5328 -963 1556 196 7 11 chr2 76070001 76070316 -177186267 + AluSx SINE Alu 14 312 0 4486 158 43 27 chr2 76070316 76071203 -177185380 + L1MA8 LINE L1 5328 6236 -55 261 274 43 34 chr2 76072417 76072534 -177184049 - L2 LINE L2 -298 3015 2898 180 220 40 40 chr2 76073163 76073213 -177183370 + L2 LINE L2 3262 3311 -2 362 251 65 47 chr2 76073474 76073637 -177182946 + MIR SINE MIR 25 189 -60 33 0 0 0 chr2 76074248 76074281 -177182302 + AT_rich Low_complexity Low_complexity 1 33 0 384 239 60 84 chr2 76075476 76075643 -177180940 + MIR SINE MIR 79 241 -21 262 274 283 0 chr2 76076319 76076545 -177180038 + L2 LINE L2 2442 2731 -583 241 234 16 0 chr2 76076569 76076633 -177179950 - MIR SINE MIR -141 121 57 180 229 181 24 chr2 76078112 76078195 -177178388 + MIR SINE MIR 21 116 -146 219 36 0 0 chr2 76078832 76078860 -177177723 + (CAGAGA)n Simple_repeat Simple_repeat 1 28 0 183 361 14 0 chr2 76078896 76078968 -177177615 + L2 LINE L2 3200 3272 0 467 270 143 25 chr2 76078997 76079193 -177177390 + MIR SINE MIR 31 249 -13 324 303 41 21 chr2 76080282 76080427 -177176156 - MIR SINE MIR -80 182 35 213 175 0 0 chr2 76080607 76080647 -177175936 + (TTCA)n Simple_repeat Simple_repeat 3 42 0 337 325 69 15 chr2 76080698 76080901 -177175682 + MIR SINE MIR 33 246 -16 325 374 24 0 chr2 76081861 76081984 -177174599 + MIR3 SINE MIR 57 182 -26 2363 60 0 0 chr2 76082097 76082418 -177174165 - AluY SINE Alu 0 322 2 284 188 25 12 chr2 76082600 76082680 -177173903 - L1MD3 LINE L1 -13 7982 7902 * 1929 262 73 33 chr2 76082679 76083661 -177172922 - L1MC4a LINE L1 -1305 6503 5482 2444 161 41 2 chr2 76083679 76084146 -177172437 - L1MC1 LINE L1 -7 6326 5842 3200 190 8 37 chr2 76084295 76085272 -177171311 - L1MC1 LINE L1 -468 5865 4905 413 245 21 0 chr2 76085267 76085410 -177171173 - L1MC4a LINE L1 -2320 5488 5343 * 287 322 52 0 chr2 76085783 76085898 -177170685 - L3 LINE CR1 -166 1411 1291 205 267 47 58 chr2 76086071 76086157 -177170426 + MIR3 SINE MIR 117 201 -7 2517 200 15 5 chr2 76086531 76087122 -177169461 + L1 LINE L1 4010 4606 -1540 2786 193 29 9 chr2 76088872 76089417 -177167166 + MER74A LTR ERVL 1 556 -2 1227 129 0 62 chr2 76090138 76090366 -177166217 - AluSg/x SINE Alu 0 318 103 881 234 18 60 chr2 76091972 76092190 -177164393 + MIR SINE MIR 29 237 -25 576 229 8 0 chr2 76092426 76092548 -177164035 - MER58B DNA MER1_type -1 340 218 205 307 160 0 chr2 76092594 76092669 -177163914 + L2 LINE L2 3185 3271 -1 1206 172 17 22 chr2 76092986 76093218 -177163365 + MSTB LTR MaLR 194 424 -2 266 303 163 11 chr2 76093381 76093559 -177163024 + MLT1J2 LTR MaLR 80 284 -166 504 141 82 0 chr2 76093602 76093639 -177162944 - MLT2B1 LTR ERVL 0 554 521 258 105 0 0 chr2 76093639 76093677 -177162906 + (CA)n Simple_repeat Simple_repeat 1 38 0 504 141 82 0 chr2 76093677 76093752 -177162831 - MLT2B1 LTR ERVL -33 521 370 240 274 98 59 chr2 76094218 76094320 -177162263 + MIR SINE MIR 35 140 -68 560 318 37 54 chr2 76095580 76095694 -177160889 - L2 LINE L2 -38 3275 3161 294 29 0 0 chr2 76095694 76095729 -177160854 + (TG)n Simple_repeat Simple_repeat 1 35 0 560 318 37 54 chr2 76095729 76095966 -177160617 - L2 LINE L2 -152 3161 2930 2027 162 8 11 chr2 76095998 76096375 -177160208 + MLT1B LTR MaLR 15 390 0 561 285 169 7 chr2 76096658 76096953 -177159630 + LTR16C LTR ERVL 147 489 -2 250 264 0 0 chr2 76097365 76097431 -177159152 - MIR SINE MIR -70 138 86 288 238 158 10 chr2 76097828 76097929 -177158654 - MIR SINE MIR -116 146 31 353 322 41 18 chr2 76098056 76098216 -177158367 + MIR3 SINE MIR 10 143 -65 304 316 44 7 chr2 76098514 76098650 -177157933 + MIR3 SINE MIR 64 204 -4 189 276 130 73 chr2 76098979 76099102 -177157481 + MIR SINE MIR 16 145 -63 297 294 119 16 chr2 76099644 76099770 -177156813 - MIR SINE MIR -114 148 10 208 325 78 30 chr2 76100370 76100438 -177156145 + MIR3 SINE MIR 20 83 -125 2312 143 10 20 chr2 76100438 76100829 -177155754 + MLT1B LTR MaLR 2 388 -2 208 325 78 30 chr2 76100829 76100926 -177155657 + MIR3 SINE MIR 83 193 -15 1571 273 19 58 chr2 76101251 76101818 -177154765 + MLT1H LTR MaLR 3 547 -2 550 320 139 34 chr2 76101969 76102500 -177154083 + MLT1G1 LTR MaLR 1 587 -8 224 328 34 28 chr2 76102510 76102680 -177153903 + MIR SINE MIR 6 177 -31 478 283 117 7 chr2 76103782 76103927 -177152656 + MIR SINE MIR 55 215 -47 427 241 32 97 chr2 76103986 76104202 -177152381 - MIR SINE MIR -54 208 7 203 156 0 0 chr2 76104327 76104359 -177152224 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 1061 203 105 90 chr2 76104905 76105295 -177151288 + MSTD LTR MaLR 1 396 0 262 296 93 9 chr2 76107956 76108064 -177148519 + L2 LINE L2 3197 3313 0 5027 26 2 2 chr2 76108079 76108665 -177147918 + L1PA5 LINE L1 5562 6147 -7 32 0 0 0 chr2 76108665 76108697 -177147886 + AT_rich Low_complexity Low_complexity 1 32 0 1658 180 64 0 chr2 76109101 76109491 -177147092 + MLT2B1 LTR ERVL 1 460 -55 2156 126 24 78 chr2 76109527 76109866 -177146717 + MER83 LTR ERV1 1 310 -138 1801 147 0 72 chr2 76109866 76110200 -177146383 - AluSx SINE Alu -2 310 1 2156 126 24 78 chr2 76110200 76110321 -177146262 + MER83 LTR ERV1 310 436 -12 290 29 0 0 chr2 76113119 76113154 -177143429 - MLT2C1 LTR ERVL -13 384 350 34 0 0 0 chr2 76113163 76113197 -177143386 + AT_rich Low_complexity Low_complexity 1 34 0 230 304 25 13 chr2 76113234 76113313 -177143270 - MLT2B1 LTR ERVL -136 384 305 277 339 66 0 chr2 76113831 76113952 -177142631 - MIR SINE MIR -85 177 49 470 231 17 34 chr2 76114198 76114315 -177142268 + MLT1E LTR MaLR 51 165 -428 2284 174 0 2 chr2 76114361 76114758 -177141825 + MER57A LTR ERV1 4 399 -4 8778 155 15 1 chr2 76114784 76117163 -177139420 + L1PA13 LINE L1 3701 6144 -19 1348 200 84 49 chr2 76117270 76117739 -177138844 + LTR49 LTR ERV1 168 572 -23 1445 206 25 13 chr2 76117766 76118081 -177138502 + MLT1E LTR MaLR 275 593 0 264 282 0 14 chr2 76118148 76118219 -177138364 + (TG)n Simple_repeat Simple_repeat 2 71 0 758 280 78 4 chr2 76118373 76118605 -177137978 + MIR SINE MIR 13 261 -1 255 292 14 14 chr2 76119462 76119534 -177137049 - MIR SINE MIR -112 96 25 258 360 9 18 chr2 76119584 76119698 -177136885 - MIR SINE MIR -137 125 13 415 307 103 39 chr2 76120055 76120349 -177136234 + LTR16A LTR ERVL 98 447 -3 1061 318 59 20 chr2 76120462 76121516 -177135067 + ERVL LTR ERVL 127 1258 -3738 682 354 95 11 chr2 76121874 76122532 -177134051 + ERVL LTR ERVL 1742 2454 -2542 651 368 30 14 chr2 76122645 76123250 -177133333 + ERVL LTR ERVL 2955 3293 -1703 362 380 80 12 chr2 76123640 76123890 -177132693 - L3 LINE CR1 -8 1569 1303 238 272 78 29 chr2 76124330 76124433 -177132150 + MIR SINE MIR 150 257 -5 959 214 130 101 chr2 76124976 76125491 -177131092 - MLT1F1 LTR MaLR -10 557 3 180 111 0 0 chr2 76125972 76125999 -177130584 + (ATGGTG)n Simple_repeat Simple_repeat 4 30 0 778 256 58 22 chr2 76126405 76126628 -177129955 - MIR SINE MIR -20 242 12 229 338 78 60 chr2 76126691 76126972 -177129611 - L2 LINE L2 -829 2485 2200 621 242 13 19 chr2 76126977 76127134 -177129449 + MLT1J2 LTR MaLR 43 198 -252 519 229 46 46 chr2 76128671 76128824 -177127759 - MIR SINE MIR -87 175 23 320 319 62 0 chr2 76129653 76129766 -177126817 + MIR SINE MIR 90 209 -53 287 330 75 0 chr2 76130715 76130821 -177125762 + L2 LINE L2 3107 3220 -52 3624 152 146 42 chr2 76130821 76131637 -177124946 + MER4D LTR ERV1 3 903 0 618 101 17 17 chr2 76131845 76131964 -177124619 + (GGAA)n Simple_repeat Simple_repeat 2 120 0 254 268 73 57 chr2 76132168 76132291 -177124292 + MIR SINE MIR 17 141 -67 298 378 19 7 chr2 76132740 76132931 -177123652 + MIR SINE MIR 15 206 -56 1345 206 41 25 chr2 76133087 76133548 -177123035 + MLT2B2 LTR ERVL 1 515 0 21 0 0 0 chr2 76134636 76134657 -177121926 + AT_rich Low_complexity Low_complexity 1 21 0 234 0 0 0 chr2 76134867 76134893 -177121690 + (A)n Simple_repeat Simple_repeat 1 26 0 1932 53 4 0 chr2 76135077 76135324 -177121259 + L1PA4 LINE L1 5906 6153 -2 5321 72 11 23 chr2 76135671 76136407 -177120176 - L1PA7 LINE L1 -2 6152 5426 333 0 0 0 chr2 76136799 76136836 -177119747 + (CA)n Simple_repeat Simple_repeat 2 38 0 2357 149 36 48 chr2 76136837 76137011 -177119572 + L1MA5A LINE L1 5797 5972 -325 679 220 0 0 chr2 76137011 76137129 -177119454 + FLAM_C SINE Alu 1 118 -15 2357 149 36 48 chr2 76137129 76137457 -177119126 + L1MA5A LINE L1 5972 6293 -4 500 331 37 34 chr2 76138095 76138391 -177118192 + LTR16A1 LTR ERVL 147 443 -14 210 204 45 0 chr2 76138431 76138475 -177118108 + L2 LINE L2 3227 3272 0 1975 194 60 34 chr2 76138753 76139170 -177117413 + MSTA LTR MaLR 1 428 0 281 334 50 68 chr2 76139296 76139572 -177117011 + L2 LINE L2 2722 2992 -280 26 0 0 0 chr2 76140734 76140760 -177115823 + AT_rich Low_complexity Low_complexity 1 26 0 314 260 114 24 chr2 76141274 76141397 -177115186 + MLT1J2 LTR MaLR 280 413 -37 417 276 127 56 chr2 76142172 76142265 -177114318 + L1M4 LINE L1 2130 2215 -3931 2313 93 0 0 chr2 76142265 76142565 -177114018 - AluY SINE Alu -11 300 1 417 276 127 56 chr2 76142565 76142866 -177113717 + L1M4 LINE L1 2215 2552 -3594 401 301 107 24 chr2 76142931 76143166 -177113417 + L1M4 LINE L1 2676 2941 -3205 1975 143 24 0 chr2 76143166 76143453 -177113130 + AluSx SINE Alu 1 294 -18 401 301 107 24 chr2 76143453 76143506 -177113077 + L1M4 LINE L1 2941 2988 -3158 225 264 28 14 chr2 76143796 76143868 -177112715 + (CATATA)n Simple_repeat Simple_repeat 6 78 0 324 383 0 0 chr2 76144047 76144167 -177112416 + L1ME LINE L1 5604 5723 -447 447 289 174 64 chr2 76144592 76145001 -177111582 - L2 LINE L2 -3 3310 2857 218 245 0 20 chr2 76147127 76147176 -177109407 - MIR3 SINE MIR -13 195 148 232 367 55 23 chr2 76147537 76147665 -177108918 + MIR SINE MIR 20 151 -111 423 125 14 14 chr2 76149810 76149882 -177106701 + MLT1B LTR MaLR 13 84 -306 3599 183 43 8 chr2 76150013 76151445 -177105138 - L1PB4 LINE L1 -118 6741 5267 348 252 54 68 chr2 76152317 76152539 -177104044 + MER34B LTR ERV1 282 500 -65 282 256 35 0 chr2 76153586 76153672 -177102911 + (TATATG)n Simple_repeat Simple_repeat 6 94 0 35 0 0 0 chr2 76155219 76155254 -177101329 + AT_rich Low_complexity Low_complexity 1 35 0 226 299 204 6 chr2 76156629 76156786 -177099797 + MIR SINE MIR 65 252 -10 1175 231 50 76 chr2 76157237 76157735 -177098848 + MLT1D LTR MaLR 21 505 0 211 356 23 11 chr2 76158558 76158645 -177097938 + L2 LINE L2 3182 3269 -44 3391 189 12 31 chr2 76158878 76159695 -177096888 - L1PB4 LINE L1 -4188 2661 1860 360 283 122 40 chr2 76160484 76160731 -177095852 - L1 LINE L1 -2681 3465 3199 26 64 0 0 chr2 76161054 76161101 -177095482 + AT_rich Low_complexity Low_complexity 1 47 0 317 43 21 0 chr2 76163948 76163995 -177092588 + (CA)n Simple_repeat Simple_repeat 2 49 0 240 229 94 31 chr2 76164154 76164250 -177092333 - MIR SINE MIR -80 182 81 3321 196 40 8 chr2 76164399 76165130 -177091453 + L1MC2 LINE L1 5580 6333 -11 412 270 251 9 chr2 76165133 76165448 -177091135 + HAL1 LINE L1 1243 1633 -874 282 56 0 0 chr2 76165508 76165544 -177091039 + (CA)n Simple_repeat Simple_repeat 1 36 0 243 259 12 0 chr2 76166445 76166526 -177090057 + HAL1b LINE L1 1256 1337 -11 1458 193 8 4 chr2 76166975 76167239 -177089344 + AluJo SINE Alu 28 292 -20 1273 133 26 22 chr2 76167257 76167483 -177089100 + MLT1B LTR MaLR 162 388 -2 255 321 42 72 chr2 76167611 76167773 -177088810 - L2 LINE L2 -1037 2277 2112 1712 164 4 0 chr2 76167773 76168036 -177088547 + AluJb SINE Alu 1 264 -48 255 321 42 72 chr2 76168036 76168250 -177088333 - L2 LINE L2 -1202 2112 1912 4479 188 47 12 chr2 76168620 76169009 -177087574 - L1M4 LINE L1 -482 5702 5328 1751 161 25 38 chr2 76169009 76169325 -177087258 - AluJo SINE Alu 0 312 1 4479 188 47 12 chr2 76169325 76169482 -177087101 - L1M4 LINE L1 -856 5328 5178 209 33 33 0 chr2 76169482 76169512 -177087071 + (TTTTA)n Simple_repeat Simple_repeat 1 31 0 2094 123 0 0 chr2 76169513 76169790 -177086793 - AluSx SINE Alu -35 277 1 4479 188 47 12 chr2 76169790 76170437 -177086146 - L1M4 LINE L1 -1006 5178 4555 1952 130 40 23 chr2 76170437 76170737 -177085846 - AluSx SINE Alu -7 305 1 4479 188 47 12 chr2 76170737 76170806 -177085777 - L1M4 LINE L1 -1629 4555 4490 2319 70 0 7 chr2 76170806 76171134 -177085449 + AluY SINE Alu 1 326 0 4479 188 47 12 chr2 76171134 76171379 -177085204 - L1M4 LINE L1 -1694 4490 4135 3553 193 28 67 chr2 76171381 76172333 -177084250 + LTR5 LTR ERVK 55 969 0 1478 191 0 57 chr2 76172621 76172936 -177083647 - AluJb SINE Alu -15 297 1 2055 137 3 19 chr2 76172967 76173282 -177083301 + AluSx SINE Alu 1 310 -2 2463 59 7 7 chr2 76173315 76173622 -177082961 - AluY SINE Alu -4 307 1 1653 184 74 11 chr2 76173622 76173905 -177082678 - AluJb SINE Alu -11 301 1 284 236 96 50 chr2 76173909 76174184 -177082399 + L1ME4a LINE L1 5255 5441 -918 * 565 275 20 7 chr2 76174172 76174321 -177082262 - MIR SINE MIR -76 186 36 196 250 50 0 chr2 76175129 76175189 -177081394 + MIR SINE MIR 105 167 -95 304 305 43 50 chr2 76175270 76175396 -177081187 + MIR SINE MIR 65 191 -71 225 0 0 0 chr2 76175396 76175421 -177081162 + (TG)n Simple_repeat Simple_repeat 2 26 0 304 305 43 50 chr2 76175421 76175435 -177081148 + MIR SINE MIR 191 204 -58 251 269 54 0 chr2 76175556 76175649 -177080934 + L1ME4a LINE L1 5933 6030 -91 2166 137 0 0 chr2 76175650 76175956 -177080627 - AluSx SINE Alu -6 306 1 2053 141 0 3 chr2 76175959 76176256 -177080327 - AluSx SINE Alu -16 296 1 321 239 69 69 chr2 76176256 76176386 -177080197 - MIR SINE MIR -96 166 37 3365 112 31 14 chr2 76176664 76177182 -177079401 - MER1A DNA MER1_type 0 527 1 412 257 181 45 chr2 76177196 76177488 -177079095 + HAL1 LINE L1 2169 2500 -7 369 266 14 49 chr2 76177585 76177728 -177078855 + MIR SINE MIR 124 261 -1 181 115 0 0 chr2 76177762 76177788 -177078795 + L2 LINE L2 3267 3292 -21 2286 130 0 0 chr2 76179841 76180148 -177076435 + AluSx SINE Alu 1 307 -5 230 243 316 15 chr2 76181352 76181488 -177075095 - MER5A DNA MER1_type 0 189 13 592 251 153 10 chr2 76181540 76181743 -177074840 - MIR SINE MIR -19 243 12 279 231 116 14 chr2 76182547 76182694 -177073889 + L2 LINE L2 2443 2604 -710 404 307 131 22 chr2 76182811 76183035 -177073548 + L2 LINE L2 2853 3112 -201 2348 93 7 0 chr2 76183035 76183337 -177073246 - AluSp SINE Alu -9 304 1 404 307 131 22 chr2 76183337 76183379 -177073204 + L2 LINE L2 3112 3148 -165 298 250 10 48 chr2 76183943 76184047 -177072536 - MIR SINE MIR -7 255 156 576 236 127 38 chr2 76184065 76184211 -177072372 + MIR SINE MIR 13 185 -77 973 158 129 0 chr2 76184211 76184420 -177072163 + MER46A DNA MER2_type 1 236 0 576 236 127 38 chr2 76184420 76184485 -177072098 + MIR SINE MIR 185 243 -19 386 288 68 0 chr2 76184501 76184633 -177071950 - MIR SINE MIR -120 142 2 1153 195 131 26 chr2 76184739 76185037 -177071546 + Charlie4a DNA MER1_type 36 386 -1575 2178 106 0 0 chr2 76185037 76185320 -177071263 - AluSq SINE Alu 0 313 31 1153 195 131 26 chr2 76185320 76185410 -177071173 + Charlie4a DNA MER1_type 386 465 -43 2347 118 0 13 chr2 76186411 76186726 -177069857 - AluSx SINE Alu -1 311 1 693 89 0 0 chr2 76186793 76186894 -177069689 - AluSg/x SINE Alu 0 309 209 341 247 46 82 chr2 76187354 76187548 -177069035 + L1MC5 LINE L1 7551 7737 -224 328 234 91 0 chr2 76188809 76188886 -177067697 + MIR SINE MIR 30 113 -95 348 278 47 14 chr2 76189541 76189692 -177066891 + MIR SINE MIR 56 216 -46 2175 95 36 0 chr2 76190296 76190599 -177065984 + AluSx SINE Alu 1 313 0 2023 147 3 3 chr2 76191350 76191650 -177064933 - AluJo SINE Alu -12 300 1 335 250 0 0 chr2 76191937 76192005 -177064578 + MIR SINE MIR 2 69 -193 698 191 37 56 chr2 76192029 76192191 -177064392 + FRAM SINE Alu 11 169 -7 245 210 210 40 chr2 76192191 76192315 -177064268 + MIR SINE MIR 99 243 -19 2265 117 0 3 chr2 76194869 76195169 -177061414 + AluSx SINE Alu 1 299 -13 330 289 254 0 chr2 76195467 76195668 -177060915 - MIR SINE MIR -8 254 3 596 252 126 5 chr2 76195993 76196199 -177060384 - MIR SINE MIR -17 245 15 29 78 0 0 chr2 76199014 76199078 -177057505 + GC_rich Low_complexity Low_complexity 1 64 0 404 369 104 31 chr2 76199254 76199541 -177057042 - L1M4 LINE L1 -1090 5056 4749 208 182 23 0 chr2 76199544 76199588 -177056995 + L2 LINE L2 3257 3301 -12 2534 61 3 0 chr2 76199693 76199988 -177056595 - AluY SINE Alu -15 296 1 698 184 0 0 chr2 76200025 76200139 -177056444 - FLAM_A SINE Alu -19 114 1 308 256 110 79 chr2 76200144 76200371 -177056212 - L1M4c LINE L1 -3893 2491 2258 382 132 13 0 chr2 76200406 76200482 -177056101 + L1PA16 LINE L1 6090 6166 0 472 159 49 147 chr2 76200512 76200675 -177055908 - FRAM SINE Alu 0 176 30 382 327 85 33 chr2 76200730 76200941 -177055642 + L1M4 LINE L1 2554 2775 -3371 2094 133 16 7 chr2 76201219 76201528 -177055055 - AluSx SINE Alu 0 312 1 707 324 40 44 chr2 76201696 76201911 -177054672 - L2 LINE L2 -1 3271 3057 2825 146 12 16 chr2 76201911 76202398 -177054185 - MER31A LTR ERV1 0 485 1 707 324 40 44 chr2 76202398 76202716 -177053867 - L2 LINE L2 -215 3057 2735 180 77 0 0 chr2 76202716 76202742 -177053841 + (TTTTTG)n Simple_repeat Simple_repeat 5 30 0 1451 122 17 68 chr2 76202810 76203106 -177053477 + L1MD3 LINE L1 7690 7970 -25 571 184 69 42 chr2 76203107 76203245 -177053338 - MER69 DNA AcHobo -134 2392 2244 1802 92 123 11 chr2 76203245 76203505 -177053078 - AluSg1 SINE Alu -17 292 4 571 184 69 42 chr2 76203505 76203583 -177053000 - MER69 DNA AcHobo -282 2244 2170 748 185 0 7 chr2 76203679 76203825 -177052758 - L1MD3 LINE L1 -271 7724 7580 * 3641 14 0 2 chr2 76203821 76204258 -177052325 + L1HS LINE L1 5720 6155 0 666 197 40 13 chr2 76204301 76204332 -177052251 - L1MD3 LINE L1 -421 7574 7545 405 0 0 0 chr2 76204332 76204377 -177052206 + (TG)n Simple_repeat Simple_repeat 2 46 0 1909 113 40 7 chr2 76204377 76204652 -177051931 - AluSx SINE Alu -27 285 2 666 197 40 13 chr2 76204652 76204771 -177051812 - L1MD3 LINE L1 -449 7546 7419 417 189 27 0 chr2 76204788 76204862 -177051721 - MLT1F1 LTR MaLR -443 124 49 1780 162 60 41 chr2 76204874 76205293 -177051290 - L1MC3 LINE L1 -674 7111 6685 1372 188 31 44 chr2 76205359 76205743 -177050840 - L1MC5 LINE L1 -465 7496 7118 279 229 0 107 chr2 76205758 76205880 -177050703 - L1MC5 LINE L1 -1042 6919 6811 2253 78 3 39 chr2 76206069 76206376 -177050207 - AluY SINE Alu -15 296 1 630 101 11 0 chr2 76206390 76206479 -177050104 + MLT1B LTR MaLR 1 90 -300 579 170 40 0 chr2 76206479 76206579 -177050004 - FRAM SINE Alu -14 162 59 2322 113 0 0 chr2 76206591 76206892 -177049691 - AluSx SINE Alu -11 301 1 841 174 6 36 chr2 76207216 76207383 -177049200 + ERVL LTR ERVL 4138 4299 -1465 2717 234 53 10 chr2 76207420 76208178 -177048405 + ERVL LTR ERVL 4372 5223 -541 535 224 51 39 chr2 76208194 76208255 -177048328 - L1ME3A LINE L1 -68 6102 6043 2179 123 7 13 chr2 76208255 76208563 -177048020 + AluSq SINE Alu 1 306 -7 535 224 51 39 chr2 76208563 76208657 -177047926 - L1ME3A LINE L1 -127 6043 5945 463 95 0 14 chr2 76208660 76208734 -177047849 - Alu SINE Alu -4 306 234 1271 235 29 64 chr2 76208735 76209026 -177047557 - L1ME3A LINE L1 -403 5767 5467 2175 85 38 57 chr2 76209026 76209344 -177047239 - AluSq SINE Alu -1 312 1 1271 235 29 64 chr2 76209344 76209446 -177047137 - L1ME3A LINE L1 -703 5467 5389 2417 85 3 0 chr2 76209446 76209740 -177046843 - AluSx SINE Alu -17 295 1 1271 235 29 64 chr2 76209740 76209796 -177046787 - L1ME3A LINE L1 -781 5389 5333 2338 77 14 3 chr2 76209835 76210145 -177046438 + AluSq SINE Alu 1 313 0 1049 117 123 0 chr2 76210182 76210336 -177046247 + AluSg/x SINE Alu 125 297 -13 584 221 34 37 chr2 76210338 76210599 -177045984 + L1ME LINE L1 5182 5436 -726 237 33 0 0 chr2 76210812 76210842 -177045741 + (CAAAT)n Simple_repeat Simple_repeat 2 31 0 458 105 0 40 chr2 76210842 76210918 -177045665 - AluJ/FLAM SINE Alu -238 74 2 21 36 0 0 chr2 76211022 76211050 -177045533 + AT_rich Low_complexity Low_complexity 1 28 0 2270 113 0 13 chr2 76212596 76212732 -177043851 + AluSx SINE Alu 1 137 -175 2759 32 3 0 chr2 76212732 76213042 -177043541 + AluY SINE Alu 1 311 0 2270 113 0 13 chr2 76213042 76213215 -177043368 + AluSx SINE Alu 137 306 -6 978 136 7 0 chr2 76213604 76213784 -177042799 - AluSg/x SINE Alu 0 314 134 2028 72 4 0 chr2 76213784 76214034 -177042549 - AluY SINE Alu -1 310 60 300 276 74 69 chr2 76214034 76214143 -177042440 - L1ME3A LINE L1 -781 5365 5258 1714 154 49 0 chr2 76214143 76214429 -177042154 + AluJb SINE Alu 1 300 -12 300 276 74 69 chr2 76214429 76214536 -177042047 - L1ME3A LINE L1 -888 5258 5148 1068 162 56 35 chr2 76214558 76214756 -177041827 - AluJb SINE Alu -13 299 98 1281 134 16 31 chr2 76214756 76214950 -177041633 - AluJb SINE Alu -121 191 1 358 315 43 25 chr2 76214955 76215117 -177041466 - L1ME3A LINE L1 -1038 5108 4944 525 198 59 113 chr2 76215175 76215247 -177041336 - MIR SINE MIR -1 261 187 1552 184 38 4 chr2 76215247 76215547 -177041036 - AluJb SINE Alu 0 314 6 525 198 59 113 chr2 76215547 76215695 -177040888 - MIR SINE MIR -75 187 52 2431 111 0 0 chr2 76215701 76216008 -177040575 - AluSx SINE Alu -5 307 1 280 316 42 0 chr2 76216278 76216373 -177040210 + L2 LINE L2 2925 3023 -290 365 165 0 147 chr2 76216414 76216471 -177040112 + L2 LINE L2 2183 2218 -1096 2166 125 0 3 chr2 76216471 76216766 -177039817 - AluSx SINE Alu -16 296 3 365 165 0 147 chr2 76216766 76216817 -177039766 + L2 LINE L2 2218 2275 -1039 316 200 209 48 chr2 76216835 76216940 -177039643 + L2 LINE L2 3191 3312 -1 2060 123 40 7 chr2 76217818 76218118 -177038465 + AluSg SINE Alu 1 310 0 1815 279 160 25 chr2 76218153 76219527 -177037056 + L2 LINE L2 1708 3269 -3 668 170 162 23 chr2 76220225 76220409 -177036174 - MER21A LTR ERV1 0 906 711 1922 94 105 0 chr2 76220412 76220678 -177035905 - AluSg SINE Alu -16 294 1 733 214 30 0 chr2 76220708 76220839 -177035744 - MER21B LTR ERV1 -728 135 1 1613 148 8 4 chr2 76221077 76221321 -177035262 - AluJo SINE Alu -31 281 37 320 161 0 18 chr2 76221870 76221926 -177034657 - AluJ SINE Alu -58 244 190 451 155 0 0 chr2 76221926 76221997 -177034586 - AluJ SINE Alu -146 156 86 482 103 58 0 chr2 76221999 76222086 -177034497 + AluJb SINE Alu 199 290 -22 2222 77 33 13 chr2 76222609 76222908 -177033675 + AluSx SINE Alu 1 305 -7 338 165 103 72 chr2 76223811 76223908 -177032675 - L1ME4a LINE L1 -29 6092 5993 227 167 0 19 chr2 76224188 76224242 -177032341 - L1ME4a LINE L1 -690 5431 5379 405 318 20 30 chr2 76225018 76225219 -177031364 + L1ME LINE L1 5527 5725 -396 1649 179 3 58 chr2 76225220 76225549 -177031034 + AluJo SINE Alu 2 312 0 711 191 8 0 chr2 76225549 76225639 -177030944 + FLAM_C SINE Alu 2 421 0 2289 99 3 7 chr2 76225646 76225950 -177030633 + AluSp SINE Alu 7 309 -4 242 164 18 0 chr2 76225951 76226006 -177030577 + GA-rich Low_complexity Low_complexity 1 56 0 196 329 30 30 chr2 76226008 76226175 -177030408 - L2 LINE L2 -410 2904 2738 295 259 32 70 chr2 76227310 76227468 -177029115 - Charlie8 DNA MER1_type -2196 221 70 354 185 15 0 chr2 76227513 76227578 -177029005 - MLT1D LTR MaLR -2 503 438 2133 110 21 0 chr2 76227578 76227859 -177028724 + AluSx SINE Alu 1 287 -25 808 152 5 27 chr2 76227859 76228043 -177028540 + GA-rich Low_complexity Low_complexity 1 180 0 299 0 42 42 chr2 76228043 76228091 -177028492 + (GAAA)n Simple_repeat Simple_repeat 4 51 0 1548 174 95 31 chr2 76228098 76228455 -177028128 - MLT1D LTR MaLR -125 380 1 905 227 36 110 chr2 76228709 76228970 -177027613 - L1MB7 LINE L1 -10 6174 5950 2348 112 0 0 chr2 76228970 76229282 -177027301 + AluSx SINE Alu 1 312 0 905 227 36 110 chr2 76229282 76229412 -177027171 - L1MB7 LINE L1 -234 5950 5812 788 179 0 0 chr2 76229428 76229551 -177027032 - FLAM_C SINE Alu -19 124 2 2591 37 7 0 chr2 76229578 76229873 -177026710 + AluY SINE Alu 1 297 -14 1394 67 0 0 chr2 76229873 76230038 -177026545 + AluSc SINE Alu 132 296 -13 1300 137 75 109 chr2 76230042 76230321 -177026262 - L1MB7 LINE L1 -347 5819 5553 2184 132 10 6 chr2 76230321 76230632 -177025951 - AluSx SINE Alu 0 312 1 1300 137 75 109 chr2 76230632 76230710 -177025873 - L1MB7 LINE L1 -613 5553 5474 * 1464 163 62 0 chr2 76230704 76230992 -177025591 - L1MB7 LINE L1 -1252 4894 4589 2699 226 40 57 chr2 76231024 76231835 -177024748 - MER21B LTR ERV1 -55 808 12 228 164 0 131 chr2 76231848 76231909 -177024674 - L1MB7 LINE L1 -1552 4594 4542 585 124 152 0 chr2 76231913 76232018 -177024565 - FLAM_C SINE Alu -3 140 20 4602 231 57 16 chr2 76232038 76233055 -177023528 - L1MB7 LINE L1 -1909 4237 3149 2408 85 3 25 chr2 76233055 76233372 -177023211 - AluSp SINE Alu -1 312 3 4602 231 57 16 chr2 76233372 76233704 -177022879 - L1MB7 LINE L1 -2997 3149 2832 375 239 56 56 chr2 76233909 76234051 -177022532 - L1MC5 LINE L1 -14 7947 7806 1990 149 0 0 chr2 76234176 76234485 -177022098 - AluJb SINE Alu 0 315 7 832 268 59 97 chr2 76234491 76235124 -177021459 - L1MDa LINE L1 -861 2040 1207 2145 125 0 0 chr2 76235124 76235438 -177021145 - AluSx SINE Alu 0 314 1 832 268 59 97 chr2 76235438 76235550 -177021033 - L1MDa LINE L1 -1694 1207 1092 282 307 150 7 chr2 76236237 76236390 -177020193 - L2 LINE L2 -981 2333 2159 2117 96 3 38 chr2 76237213 76237529 -177019054 - AluSx SINE Alu 0 306 1 283 268 0 0 chr2 76237570 76237626 -177018957 - L2 LINE L2 -7 3306 3251 276 268 131 33 chr2 76238114 76238297 -177018286 + L2 LINE L2 1801 2001 -1313 379 251 48 66 chr2 76238445 76238597 -177017986 - L1ME4a LINE L1 -104 6017 5864 2308 169 67 10 chr2 76238597 76239000 -177017583 + MSTB LTR MaLR 1 426 0 379 251 48 66 chr2 76239000 76239165 -177017418 - L1ME4a LINE L1 -257 5864 5700 567 108 0 0 chr2 76239201 76239275 -177017308 + AluJ/FLAM SINE Alu 28 101 -211 330 325 88 21 chr2 76239624 76239818 -177016765 + L1MEd LINE L1 721 927 -5192 1158 173 0 0 chr2 76239870 76240049 -177016534 + AluJb SINE Alu 130 308 -4 441 291 96 20 chr2 76240145 76240451 -177016132 + L1MC4 LINE L1 7311 7736 -306 278 327 2 0 chr2 76240545 76240665 -177015918 + L1MC5 LINE L1 7808 8011 -31 180 294 82 12 chr2 76240695 76240780 -177015803 - L3b LINE CR1 -118 1465 1375 258 133 0 0 chr2 76241058 76241103 -177015480 - L1ME4a LINE L1 -1 6120 6076 229 171 40 40 chr2 76241177 76241253 -177015330 + (CATATA)n Simple_repeat Simple_repeat 6 81 0 2209 116 0 0 chr2 76241451 76241744 -177014839 - AluSx SINE Alu -19 293 1 2253 66 3 90 chr2 76241872 76242207 -177014376 - AluSx SINE Alu -6 306 1 1678 139 12 106 chr2 76242210 76242410 -177014173 - AluJb SINE Alu -13 299 141 1627 91 9 17 chr2 76242410 76242640 -177013943 + AluY SINE Alu 80 307 -4 1678 139 12 106 chr2 76242640 76242769 -177013814 - AluJb SINE Alu -171 141 1 24 0 0 0 chr2 76242769 76242793 -177013790 + AT_rich Low_complexity Low_complexity 1 24 0 1604 144 104 7 chr2 76243110 76243388 -177013195 - AluJb SINE Alu -7 305 1 339 291 110 0 chr2 76243432 76243559 -177013024 - L1ME4a LINE L1 -2001 5807 5667 447 254 87 54 chr2 76243566 76243842 -177012741 + L1MEd LINE L1 973 1257 -4862 2535 54 3 0 chr2 76243943 76244240 -177012343 + AluY SINE Alu 1 298 -13 2290 125 0 0 chr2 76244264 76244567 -177012016 + AluSx SINE Alu 1 303 -9 1130 214 159 107 chr2 76244585 76244845 -177011738 + L1MC5 LINE L1 6562 6807 -1154 2067 117 0 31 chr2 76244845 76245135 -177011448 + AluSx SINE Alu 5 285 -27 1130 214 159 107 chr2 76245135 76246134 -177010449 + L1MC5 LINE L1 6807 7913 -48 2527 76 3 0 chr2 76246185 76246489 -177010094 + AluY SINE Alu 1 305 -6 1247 147 0 0 chr2 76246567 76246737 -177009846 + AluSx SINE Alu 1 170 -142 411 139 0 58 chr2 76246737 76246823 -177009760 + Alu SINE Alu 230 310 -1 473 289 66 5 chr2 76246841 76247038 -177009545 + L1M1 LINE L1 2809 3093 -4548 251 299 60 30 chr2 76247180 76247347 -177009236 - L1M4 LINE L1 -1785 4361 4190 2343 93 3 7 chr2 76247420 76247722 -177008861 - AluSx SINE Alu -11 301 1 435 292 67 5 chr2 76247733 76247928 -177008655 - L1M4 LINE L1 -1987 4159 3953 2389 98 0 0 chr2 76248359 76248664 -177007919 - AluSx SINE Alu -7 305 1 248 304 192 37 chr2 76248698 76249234 -177007349 + L2 LINE L2 2027 2645 -669 204 40 0 0 chr2 76249875 76249900 -177006683 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 2277 61 0 4 chr2 76249902 76250182 -177006401 - AluY SINE Alu -32 279 1 235 284 236 36 chr2 76250402 76251042 -177005541 - L2 LINE L2 -821 2493 1726 567 142 80 0 chr2 76251494 76251607 -177004976 - MLT1F1 LTR MaLR -445 122 1 811 85 28 0 chr2 76251610 76251709 -177004874 + AluSg/x SINE Alu 183 287 -25 399 21 0 0 chr2 76251709 76251757 -177004826 + (CAAAC)n Simple_repeat Simple_repeat 2 49 0 1725 155 0 0 chr2 76251921 76252173 -177004410 + AluJb SINE Alu 38 289 -23 2172 109 10 13 chr2 76252278 76252582 -177004001 + AluSx SINE Alu 1 303 -9 205 302 121 67 chr2 76252756 76252905 -177003678 - L2 LINE L2 -201 3071 2915 3190 113 93 8 chr2 76253073 76253559 -177003024 - MER1A DNA MER1_type 0 527 1 267 246 164 9 chr2 76253736 76253846 -177002737 + MIR SINE MIR 126 252 -10 2207 117 7 7 chr2 76254285 76254593 -177001990 + AluSx SINE Alu 1 308 -4 257 186 0 6 chr2 76254603 76254660 -177001923 - Alu SINE Alu -260 40 1 1676 231 37 15 chr2 76254660 76255123 -177001460 + L1ME1 LINE L1 5675 6147 -19 742 201 93 31 chr2 76256096 76256290 -177000293 - MIR SINE MIR -54 208 3 232 247 26 13 chr2 76256649 76256726 -176999857 - MER112 DNA MER1_type -6 254 177 2218 126 3 0 chr2 76256726 76257027 -176999556 + AluSx SINE Alu 1 302 -10 2021 127 3 23 chr2 76257040 76257347 -176999236 - AluSq SINE Alu -12 301 1 484 260 28 45 chr2 76257348 76257525 -176999058 - MER112 DNA MER1_type -69 191 18 2252 95 7 3 chr2 76257677 76257972 -176998611 - AluSx SINE Alu -16 296 1 287 277 112 41 chr2 76258092 76258334 -176998249 - L1ME4a LINE L1 -106 6015 5757 598 305 60 50 chr2 76259092 76259619 -176996964 - LTR33A LTR ERVL -19 504 3 1239 168 75 65 chr2 76259815 76260107 -176996476 - AluJo SINE Alu -17 295 1 2393 98 0 0 chr2 76260109 76260406 -176996177 - AluSc SINE Alu -12 297 1 880 134 0 49 chr2 76260406 76260548 -176996035 - AluJo SINE Alu -171 141 7 1453 142 19 0 chr2 76260798 76261003 -176995580 + AluJb SINE Alu 103 311 -1 331 68 34 17 chr2 76261007 76261066 -176995517 + (GGAA)n Simple_repeat Simple_repeat 3 62 0 648 163 28 22 chr2 76261070 76261248 -176995335 + GA-rich Low_complexity Low_complexity 1 179 0 359 371 28 0 chr2 76261772 76261915 -176994668 - MIR SINE MIR -54 208 62 894 183 17 17 chr2 76262603 76262778 -176993805 + MER45A DNA AcHobo 4 178 0 234 0 0 0 chr2 76263188 76263214 -176993369 + (TG)n Simple_repeat Simple_repeat 1 26 0 906 133 8 0 chr2 76263959 76264087 -176992496 - FLAM_C SINE Alu -4 129 1 322 278 110 46 chr2 76264336 76264509 -176992074 - MIR3 SINE MIR -20 188 5 507 238 79 0 chr2 76264839 76264965 -176991618 + MER91A DNA MER1_type 1 136 -60 387 267 23 11 chr2 76265570 76265746 -176990837 + (CA)n Simple_repeat Simple_repeat 2 179 0 2237 102 10 0 chr2 76265867 76266160 -176990423 - AluSx SINE Alu -16 296 1 1083 103 0 0 chr2 76266160 76266296 -176990287 - AluSq/x SINE Alu -176 136 1 200 358 15 0 chr2 76266537 76266604 -176989979 - L2 LINE L2 -80 3192 3125 384 202 115 19 chr2 76267075 76267179 -176989404 - MER96 DNA MER1_type? -51 124 11 26 0 0 0 chr2 76268384 76268410 -176988173 + GC_rich Low_complexity Low_complexity 1 26 0 252 186 14 57 chr2 76270768 76270838 -176985745 + MIR SINE MIR 66 132 -130 1516 140 9 106 chr2 76270858 76271187 -176985396 + AluJb SINE Alu 4 300 -12 485 241 84 12 chr2 76271362 76271586 -176984997 + L1ME2 LINE L1 5687 5934 -230 34 0 0 0 chr2 76271589 76271623 -176984960 + AT_rich Low_complexity Low_complexity 1 34 0 916 123 0 0 chr2 76271625 76271747 -176984836 - FLAM_C SINE Alu -11 122 1 21 0 0 0 chr2 76271924 76271945 -176984638 + AT_rich Low_complexity Low_complexity 1 21 0 456 278 83 33 chr2 76272123 76272364 -176984219 + L2 LINE L2 2142 2394 -920 305 305 79 49 chr2 76272385 76272549 -176984034 + HAL1 LINE L1 1379 1547 -960 2098 82 71 0 chr2 76272877 76273145 -176983438 + AluSg SINE Alu 5 291 -19 7657 36 0 1 chr2 76273287 76274798 -176981785 + L1PA5 LINE L1 4639 6150 -4 1848 173 3 19 chr2 76274843 76275156 -176981427 + AluSx SINE Alu 1 308 -4 921 162 0 45 chr2 76275156 76275310 -176981273 + AluSg/x SINE Alu 132 278 -32 1024 66 36 6 chr2 76275311 76275477 -176981106 + (GAAA)n Simple_repeat Simple_repeat 2 172 0 2277 119 3 0 chr2 76275490 76275802 -176980781 + AluSq SINE Alu 1 313 0 422 38 25 51 chr2 76275804 76275883 -176980700 + (GGAA)n Simple_repeat Simple_repeat 4 80 0 1018 279 114 40 chr2 76276240 76276337 -176980246 - L2 LINE L2 -2 3311 3223 657 200 17 0 chr2 76276337 76276452 -176980131 + FLAM_A SINE Alu 1 117 -16 198 0 0 0 chr2 76276456 76276478 -176980105 + (CAAAA)n Simple_repeat Simple_repeat 3 24 0 1018 279 114 40 chr2 76276478 76276629 -176979954 - L2 LINE L2 -92 3221 3083 1984 86 0 128 chr2 76276629 76276996 -176979587 - AluSq SINE Alu 0 324 1 1018 279 114 40 chr2 76276996 76277466 -176979117 - L2 LINE L2 -230 3083 2534 1106 182 243 12 chr2 76277466 76277713 -176978870 - AluSg1 SINE Alu -5 304 1 791 219 22 6 chr2 76277713 76277896 -176978687 - L2 LINE L2 -771 2543 2358 2365 102 0 19 chr2 76278105 76278418 -176978165 - AluSx SINE Alu -5 307 1 1285 231 144 44 chr2 76278614 76278779 -176977804 - MLT1G1 LTR MaLR 0 595 448 1049 207 0 0 chr2 76278779 76278953 -176977630 + MER45A DNA AcHobo 1 174 -4 1285 231 144 44 chr2 76278953 76279328 -176977255 - MLT1G1 LTR MaLR -147 448 1 1075 183 0 0 chr2 76279407 76279582 -176977001 - FAM SINE Alu 0 175 1 355 233 33 0 chr2 76279904 76279994 -176976589 + MER5A DNA MER1_type 17 109 -80 631 207 52 0 chr2 76280062 76280197 -176976386 + MER5B DNA MER1_type 1 142 -36 279 54 0 0 chr2 76280930 76280967 -176975616 + (CCA)n Simple_repeat Simple_repeat 2 38 0 1941 159 30 0 chr2 76281265 76281566 -176975017 + AluSx SINE Alu 3 312 0 287 290 131 28 chr2 76281747 76281762 -176974821 + MIR SINE MIR 37 49 -167 490 85 0 149 chr2 76281762 76281791 -176974792 + MADE1 DNA Mariner 1 33 -47 2055 125 21 0 chr2 76281791 76282078 -176974505 + AluSx SINE Alu 1 293 -19 490 85 0 149 chr2 76282078 76282142 -176974441 + MADE1 DNA Mariner 33 80 0 287 290 131 28 chr2 76282142 76282235 -176974348 + MIR SINE MIR 49 154 -62 198 209 15 90 chr2 76282513 76282580 -176974003 + MIR SINE MIR 91 152 -56 710 199 8 0 chr2 76282592 76282723 -176973860 + FLAM_C SINE Alu 8 139 -4 2231 136 3 0 chr2 76282740 76283049 -176973534 + AluSx SINE Alu 1 310 -2 2168 110 13 3 chr2 76283049 76283349 -176973234 + AluSc SINE Alu 1 303 -6 647 98 0 10 chr2 76283356 76283458 -176973125 + (GGAA)n Simple_repeat Simple_repeat 4 104 0 2220 99 7 0 chr2 76283786 76284107 -176972476 - AluSx SINE Alu 0 323 1 261 235 113 78 chr2 76284218 76284333 -176972250 + L2 LINE L2 3144 3262 -10 253 248 0 29 chr2 76284736 76284841 -176971742 + GA-rich Low_complexity Low_complexity 1 102 0 207 241 13 51 chr2 76285237 76285316 -176971267 - L2 LINE L2 0 3313 3238 465 274 62 35 chr2 76285329 76285662 -176970921 + L1MC4a LINE L1 5545 5824 -297 335 258 122 57 chr2 76285751 76285867 -176970716 - L1ME LINE L1 -377 5744 5637 880 152 0 0 chr2 76285867 76285999 -176970584 + AluJo/FLAM SINE Alu 1 132 -170 1646 152 4 4 chr2 76285999 76286279 -176970304 + AluJb SINE Alu 27 306 0 217 0 0 0 chr2 76286255 76286370 -176970213 + (CAA)n Simple_repeat Simple_repeat 1 115 0 335 258 122 57 chr2 76286279 76286679 -176969904 - L1ME LINE L1 -484 5637 5282 2114 133 10 0 chr2 76286679 76286972 -176969611 - AluSq SINE Alu -17 296 1 335 258 122 57 chr2 76286972 76287001 -176969582 - L1ME LINE L1 -839 5282 5256 723 167 30 8 chr2 76287102 76287226 -176969357 + AluJo SINE Alu 1 130 -182 2244 138 0 0 chr2 76287226 76287538 -176969045 - AluSx SINE Alu 0 312 1 331 286 57 29 chr2 76287578 76287683 -176968900 - L1MC4 LINE L1 -9 8033 7926 2258 91 0 0 chr2 76287855 76288129 -176968454 - AluSg SINE Alu -12 298 25 1652 247 124 22 chr2 76288159 76288706 -176967877 + MLT2F LTR ERVL 10 612 -51 736 172 8 8 chr2 76288752 76288874 -176967709 + FLAM_A SINE Alu 5 126 -7 251 224 0 0 chr2 76288874 76288932 -176967651 + MLT2F LTR ERVL 604 661 -2 23 33 0 0 chr2 76289107 76289137 -176967446 + AT_rich Low_complexity Low_complexity 1 30 0 2209 114 10 7 chr2 76289137 76289444 -176967139 - AluSq SINE Alu -5 308 1 421 269 60 35 chr2 76289534 76289858 -176966725 + ERVL-F LTR ERVL 298 714 -5050 1208 132 61 168 chr2 76289865 76290192 -176966391 + AluJo SINE Alu 2 293 -9 1090 299 102 19 chr2 76290245 76290784 -176965799 + ERVL-F LTR ERVL 861 1444 -4320 305 347 110 27 chr2 76290972 76291191 -176965392 - L1 LINE L1 -2439 3707 3471 1031 119 0 0 chr2 76291384 76291518 -176965065 + AluSq/x SINE Alu 3 136 -176 2135 112 7 20 chr2 76291518 76291821 -176964762 + AluSx SINE Alu 1 299 -13 839 135 16 0 chr2 76291852 76291978 -176964605 - FLAM_C SINE Alu -5 128 1 2325 116 0 0 chr2 76292065 76292359 -176964224 - AluSg SINE Alu -16 294 1 671 200 168 0 chr2 76293071 76293226 -176963357 - MER5A DNA MER1_type 0 189 9 318 323 93 0 chr2 76293255 76293417 -176963166 - MIR SINE MIR -27 181 32 265 279 27 54 chr2 76293423 76293534 -176963049 - L2 LINE L2 -23 3249 3142 2146 121 0 0 chr2 76294504 76294785 -176961798 - AluSq SINE Alu -32 281 1 180 200 0 0 chr2 76294984 76295029 -176961554 + (TTCA)n Simple_repeat Simple_repeat 1 45 0 203 244 24 0 chr2 76295042 76295083 -176961500 + MIR SINE MIR 201 242 -20 * 209 268 36 0 chr2 76295051 76295107 -176961476 + L2 LINE L2 3215 3272 0 225 94 0 0 chr2 76300970 76301002 -176955581 + (GGA)n Simple_repeat Simple_repeat 2 33 0 1904 158 0 20 chr2 76302548 76302845 -176953738 - AluJo SINE Alu -21 291 1 200 287 73 67 chr2 76302940 76303104 -176953479 + MIR3 SINE MIR 41 205 -3 1440 141 23 0 chr2 76304217 76304437 -176952146 - AluJb SINE Alu -3 309 85 283 292 112 62 chr2 76304783 76305000 -176951583 - MIR SINE MIR -17 245 21 573 264 179 53 chr2 76305687 76306129 -176950454 + L2 LINE L2 2566 3048 -224 2584 47 0 0 chr2 76306221 76306522 -176950061 - AluY SINE Alu -10 301 1 1555 122 12 125 chr2 76306522 76306858 -176949725 - AluJb SINE Alu -4 298 1 214 348 22 0 chr2 76306891 76306983 -176949600 + L2 LINE L2 3219 3312 -1 2679 32 0 7 chr2 76307157 76307467 -176949116 + AluY SINE Alu 1 308 -3 237 382 14 0 chr2 76307717 76307861 -176948722 + (TG)n Simple_repeat Simple_repeat 1 146 0 25 0 0 0 chr2 76308269 76308294 -176948289 + GC_rich Low_complexity Low_complexity 1 25 0 469 256 102 11 chr2 76308915 76309091 -176947492 + MIR SINE MIR 21 212 -50 225 247 27 41 chr2 76310042 76310115 -176946468 - L2 LINE L2 -2 3311 3240 620 206 18 29 chr2 76310695 76310871 -176945712 + MIR SINE MIR 2 262 0 2393 104 3 0 chr2 76311435 76311742 -176944841 - AluSg SINE Alu -2 308 1 21 0 0 0 chr2 76312816 76312837 -176943746 + AT_rich Low_complexity Low_complexity 1 21 0 1019 191 183 12 chr2 76312884 76313125 -176943458 + AluJo SINE Alu 1 282 -30 29 28 0 0 chr2 76313129 76313165 -176943418 + AT_rich Low_complexity Low_complexity 1 36 0 507 134 0 12 chr2 76313200 76313282 -176943301 - FLAM_C SINE Alu -7 136 56 525 311 50 22 chr2 76313309 76313489 -176943094 + L2 LINE L2 2705 2889 -425 325 232 125 0 chr2 76313662 76313774 -176942809 + MER112 DNA MER1_type 4 129 -131 29 28 0 0 chr2 76315714 76315750 -176940833 + AT_rich Low_complexity Low_complexity 1 36 0 647 211 8 15 chr2 76316004 76316137 -176940446 - FLAM_A SINE Alu -1 132 1 21 0 0 0 chr2 76316137 76316158 -176940425 + AT_rich Low_complexity Low_complexity 1 21 0 716 197 8 0 chr2 76316573 76316690 -176939893 + FLAM_C SINE Alu 1 118 -15 2484 80 0 0 chr2 76316842 76317144 -176939439 - AluSq SINE Alu -11 302 1 885 161 0 0 chr2 76317243 76317373 -176939210 + FLAM_C SINE Alu 1 130 -13 2376 89 0 0 chr2 76317390 76317683 -176938900 - AluSx SINE Alu -19 293 1 200 338 29 0 chr2 76318367 76318435 -176938148 + MIR SINE MIR 57 126 -136 263 230 25 79 chr2 76318544 76318655 -176937928 + MIR SINE MIR 44 152 -60 23 86 0 0 chr2 76318684 76318742 -176937841 + AT_rich Low_complexity Low_complexity 1 58 0 819 135 15 15 chr2 76319170 76319303 -176937280 - FLAM_C SINE Alu 0 133 1 189 298 138 0 chr2 76320103 76320197 -176936386 + L2 LINE L2 1888 1994 -1320 312 261 101 32 chr2 76320297 76320467 -176936116 - L1MC4a LINE L1 -1799 6009 5823 956 186 88 10 chr2 76320467 76320660 -176935923 + MER3 DNA MER1_type 1 208 -1 312 261 101 32 chr2 76320660 76320677 -176935906 - L1MC4a LINE L1 -1985 5823 5809 226 328 43 60 chr2 76321362 76321478 -176935105 + L2 LINE L2 2354 2467 -847 249 358 37 0 chr2 76321860 76321941 -176934642 + L2 LINE L2 2961 3044 -228 2324 106 0 13 chr2 76323455 76323758 -176932825 - AluSx SINE Alu -13 299 1 1890 131 4 14 chr2 76325758 76326033 -176930550 + AluJo SINE Alu 1 272 -40 2247 99 3 3 chr2 76326762 76327057 -176929526 + AluSg SINE Alu 1 293 -17 268 192 0 37 chr2 76327173 76327247 -176929336 + MIR SINE MIR 83 152 -56 244 267 23 23 chr2 76327271 76327357 -176929226 + MIR SINE MIR 63 148 -114 243 0 0 0 chr2 76327428 76327455 -176929128 + (TA)n Simple_repeat Simple_repeat 2 28 0 233 342 103 7 chr2 76328831 76328986 -176927597 + MIR SINE MIR 21 190 -72 1514 174 35 14 chr2 76329380 76329667 -176926916 - AluJb SINE Alu -16 296 4 625 225 110 12 chr2 76335187 76335360 -176921223 - MIR SINE MIR -57 205 16 182 333 8 42 chr2 76336016 76336136 -176920447 + L2 LINE L2 2381 2496 -818 2112 114 3 7 chr2 76336159 76336457 -176920126 - AluSx SINE Alu -15 297 1 338 316 34 8 chr2 76336568 76336685 -176919898 - L2 LINE L2 0 3272 3153 181 326 155 16 chr2 76336897 76337026 -176919557 - L2 LINE L2 0 3313 3167 2309 103 0 0 chr2 76337040 76337350 -176919233 + AluSx SINE Alu 1 310 -2 319 311 116 49 chr2 76337638 76337829 -176918754 - MIR SINE MIR -5 257 46 2136 85 4 0 chr2 76337829 76338144 -176918439 - AluSp SINE Alu 0 316 1 319 311 116 49 chr2 76338144 76338176 -176918407 - MIR SINE MIR -216 46 18 762 135 7 64 chr2 76338442 76338583 -176918000 + FLAM_C SINE Alu 11 143 0 250 302 0 28 chr2 76341078 76341184 -176915399 + GA-rich Low_complexity Low_complexity 2 104 0 1068 249 218 8 chr2 76342592 76342724 -176913859 - L2 LINE L2 -3 3310 3207 2035 154 30 43 chr2 76342724 76343095 -176913488 - MER47A DNA MER2_type 0 366 1 1068 249 218 8 chr2 76343095 76343582 -176913001 - L2 LINE L2 -106 3207 1537 26 0 0 0 chr2 76344543 76344569 -176912014 + GC_rich Low_complexity Low_complexity 1 26 0 29 60 0 0 chr2 76344717 76344767 -176911816 + GC_rich Low_complexity Low_complexity 1 50 0 1470 229 62 8 chr2 76345079 76345480 -176911103 + L1ME3 LINE L1 5705 6127 -35 442 217 26 26 chr2 76346299 76346414 -176910169 + MLT1K LTR MaLR 2 116 -472 846 286 80 21 chr2 76346460 76346724 -176909859 + MLT1K LTR MaLR 226 516 -72 1968 141 7 0 chr2 76346724 76347015 -176909568 - AluSx SINE Alu -19 293 1 846 286 80 21 chr2 76347015 76347089 -176909494 + MLT1K LTR MaLR 516 584 -4 421 317 121 12 chr2 76348465 76348705 -176907878 + MLT1K LTR MaLR 2 267 -321 277 333 67 0 chr2 76348774 76348924 -176907659 + MLT1K LTR MaLR 429 588 0 248 302 139 16 chr2 76349289 76349667 -176906916 - L1MC/D LINE L1 -743 5403 5042 792 203 0 0 chr2 76349820 76349953 -176906630 - FLAM_C SINE Alu 0 133 1 2385 64 0 29 chr2 76349963 76350276 -176906307 - AluY SINE Alu -7 304 1 2129 102 3 10 chr2 76350277 76350570 -176906013 - AluSq SINE Alu -22 291 1 691 193 5 92 chr2 76350645 76350863 -176905720 - L1MC5 LINE L1 -44 7917 7719 2042 112 10 0 chr2 76350878 76351172 -176905411 - AluSx SINE Alu -15 297 1 1397 108 15 0 chr2 76351307 76351511 -176905072 + AluSq SINE Alu 95 301 -12 371 20 0 20 chr2 76351647 76351696 -176904887 + (GA)n Simple_repeat Simple_repeat 2 49 0 316 333 21 8 chr2 76351696 76351923 -176904660 + L1M4 LINE L1 3253 3486 -2660 1020 256 128 39 chr2 76353019 76353456 -176903127 + MLT1K LTR MaLR 1 476 0 393 342 34 103 chr2 76353530 76353910 -176902673 - L2 LINE L2 -4 3268 2915 535 236 7 56 chr2 76353910 76354054 -176902529 + L2 LINE L2 3177 3313 0 218 332 247 10 chr2 76354074 76354899 -176901684 - L2 LINE L2 -630 2684 1664 237 301 100 100 chr2 76355052 76355514 -176901069 + L2 LINE L2 2308 2769 -545 224 226 36 48 chr2 76355679 76355763 -176900820 + L2 LINE L2 2977 3059 -213 358 263 61 0 chr2 76356355 76356454 -176900129 - MIR SINE MIR -69 193 89 367 298 111 50 chr2 76356479 76356936 -176899647 + MLT1H LTR MaLR 20 548 -1 185 146 21 83 chr2 76357059 76357083 -176899500 + L2 LINE L2 3269 3290 -23 2188 105 3 0 chr2 76357083 76357377 -176899206 - AluSp SINE Alu -18 295 1 185 146 21 83 chr2 76357377 76357400 -176899183 + L2 LINE L2 3290 3313 0 1637 167 33 13 chr2 76357514 76357819 -176898764 + AluJb SINE Alu 1 311 -1 204 325 0 0 chr2 76358750 76358827 -176897756 + (CA)n Simple_repeat Simple_repeat 2 78 0 223 205 36 36 chr2 76359432 76359515 -176897068 + GA-rich Low_complexity Low_complexity 1 83 0 274 43 0 43 chr2 76359980 76360026 -176896557 + (GGA)n Simple_repeat Simple_repeat 1 44 0 300 309 287 0 chr2 76361423 76361604 -176894979 - MIR SINE MIR -28 234 2 517 352 0 0 chr2 76361823 76362002 -176894581 + (TG)n Simple_repeat Simple_repeat 1 179 0 231 317 25 17 chr2 76362284 76362404 -176894179 + CT-rich Low_complexity Low_complexity 3 123 0 344 323 25 6 chr2 76363087 76363245 -176893338 + MIR3 SINE MIR 7 167 -41 797 162 0 0 chr2 76363266 76363383 -176893200 - FLAM_C SINE Alu -25 118 2 635 284 41 0 chr2 76363560 76363754 -176892829 + L1MEd LINE L1 3 204 -5915 743 324 55 19 chr2 76363798 76364107 -176892476 + L1MEd LINE L1 425 744 -5375 248 380 31 0 chr2 76364349 76364512 -176892071 - L2 LINE L2 -1075 2239 2072 222 186 0 0 chr2 76366323 76366366 -176890217 - L2 LINE L2 -1 3271 3229 188 171 0 0 chr2 76369473 76369508 -176887075 + MIR SINE MIR 49 83 -179 21 0 0 0 chr2 76369686 76369707 -176886876 + AT_rich Low_complexity Low_complexity 1 21 0 355 289 69 51 chr2 76369783 76370266 -176886317 - L1MD2 LINE L1 -345 6014 5515 187 267 0 0 chr2 76370934 76370979 -176885604 - L2 LINE L2 -1 3312 3268 529 303 34 6 chr2 76372136 76372311 -176884272 - MIR SINE MIR -49 213 34 294 29 0 0 chr2 76372546 76372581 -176884002 + (TG)n Simple_repeat Simple_repeat 1 35 0 244 267 12 58 chr2 76372696 76372782 -176883801 - L2 LINE L2 -4 3309 3228 240 195 12 24 chr2 76373119 76373201 -176883382 + CT-rich Low_complexity Low_complexity 1 81 0 601 229 123 0 chr2 76374027 76374206 -176882377 - MIR SINE MIR -13 249 49 462 111 0 0 chr2 76374246 76374309 -176882274 + U6 snRNA snRNA 2 64 -43 251 289 116 0 chr2 76374322 76374443 -176882140 - L1ME LINE L1 -463 5658 5524 228 295 86 0 chr2 76374445 76374550 -176882033 - L1ME LINE L1 -2344 5464 5351 1764 112 8 4 chr2 76374585 76374843 -176881740 - AluSp SINE Alu -13 300 42 797 146 15 44 chr2 76375020 76375157 -176881426 - AluJo SINE Alu -178 134 2 230 260 0 0 chr2 76375933 76375983 -176880600 - MLT1K LTR MaLR -16 572 523 608 65 65 0 chr2 76375984 76376092 -176880491 + GA-rich Low_complexity Low_complexity 1 115 0 386 285 80 13 chr2 76377030 76377181 -176879402 + MIR SINE MIR 35 195 -67 216 0 0 0 chr2 76377225 76377249 -176879334 + (A)n Simple_repeat Simple_repeat 1 24 0 462 292 18 47 chr2 76377545 76377716 -176878867 - L2 LINE L2 -191 3081 2916 182 315 88 85 chr2 76377985 76378343 -176878240 - L2 LINE L2 -534 2780 2419 1885 142 10 32 chr2 76378343 76378652 -176877931 - AluJb SINE Alu -10 302 1 182 315 88 85 chr2 76378652 76378693 -176877890 - L2 LINE L2 -895 2419 2380 1330 178 76 88 chr2 76378716 76379148 -176877435 - L1ME3 LINE L1 0 6162 5733 584 300 145 25 chr2 76379505 76379898 -176876685 - LTR16A LTR ERVL -10 440 1 358 289 130 54 chr2 76379904 76380382 -176876201 + L1MC4a LINE L1 4562 5075 -1071 340 290 89 0 chr2 76380432 76380601 -176875982 + L1MC4a LINE L1 5722 5905 -1903 259 258 89 40 chr2 76381363 76381459 -176875124 + LTR67 LTR ERVL 428 533 -24 2022 217 110 36 chr2 76381459 76382012 -176874571 - MLT1G1 LTR MaLR -1 594 1 259 258 89 40 chr2 76382012 76382039 -176874544 + LTR67 LTR ERVL 533 557 0 303 157 0 0 chr2 76382667 76382737 -176873846 + CT-rich Low_complexity Low_complexity 1 70 0 274 43 0 43 chr2 76383828 76383874 -176872709 + (GGA)n Simple_repeat Simple_repeat 1 44 0 258 244 12 65 chr2 76385679 76385847 -176870736 + C-rich Low_complexity Low_complexity 6 164 0 584 279 32 18 chr2 76387143 76387362 -176869221 - MIR SINE MIR -33 229 8 227 356 70 9 chr2 76387912 76388027 -176868556 + L2 LINE L2 3123 3244 -28 23 0 0 0 chr2 76388456 76388479 -176868104 + AT_rich Low_complexity Low_complexity 1 23 0 312 238 74 33 chr2 76388479 76388601 -176867982 + Charlie7 DNA MER1_type 2443 2569 -43 3936 149 28 33 chr2 76388602 76389145 -176867438 - L1MA9 LINE L1 0 6312 5773 261 0 0 0 chr2 76389145 76389174 -176867409 + (TCTA)n Simple_repeat Simple_repeat 2 30 0 3936 149 28 33 chr2 76389174 76389395 -176867188 - L1MA9 LINE L1 -539 5773 5552 3418 168 9 0 chr2 76389697 76390276 -176866307 - L1MA9 LINE L1 -895 5251 4668 4570 30 8 0 chr2 76390445 76390972 -176865611 - L1PA3 LINE L1 -1 6154 5624 30 45 0 0 chr2 76391304 76391348 -176865235 + AT_rich Low_complexity Low_complexity 1 44 0 2333 74 10 13 chr2 76392032 76392331 -176864252 + AluSc SINE Alu 1 298 -11 1910 108 3 26 chr2 76393342 76393648 -176862935 - AluY SINE Alu -12 299 1 885 147 7 0 chr2 76393965 76394101 -176862482 + FRAM SINE Alu 28 164 -12 2031 196 86 46 chr2 76394193 76394695 -176861888 + MLT1F LTR MaLR 21 549 0 1451 205 32 93 chr2 76394716 76395091 -176861492 - MLT1C LTR MaLR 0 467 128 3578 153 4 4 chr2 76395091 76395648 -176860935 - MER41D LTR ERV1 0 557 1 1451 205 32 93 chr2 76395648 76395769 -176860814 - MLT1C LTR MaLR -339 128 1 389 238 9 48 chr2 76395773 76395878 -176860705 - MLT1J LTR MaLR -85 426 326 189 0 0 0 chr2 76396475 76396496 -176860087 + (TTCC)n Simple_repeat Simple_repeat 3 23 0 289 77 58 0 chr2 76396699 76396751 -176859832 + CT-rich Low_complexity Low_complexity 3 57 0 812 202 6 18 chr2 76396751 76396919 -176859664 - FRAM SINE Alu 0 166 1 365 203 14 0 chr2 76396922 76396991 -176859592 - MER5A DNA MER1_type -5 184 115 1986 144 0 7 chr2 76397542 76397840 -176858743 - AluJo SINE Alu -16 296 1 227 269 0 15 chr2 76397858 76397925 -176858658 - MLT1J LTR MaLR -210 301 236 2078 111 7 14 chr2 76399222 76399541 -176857042 + AluSc SINE Alu 1 317 0 245 341 33 0 chr2 76399965 76400056 -176856527 + MIR3 SINE MIR 94 187 -21 2205 118 0 14 chr2 76400357 76400654 -176855929 - AluSx SINE Alu -19 293 1 281 200 114 38 chr2 76400685 76400790 -176855793 - MIR SINE MIR -65 143 31 1870 145 3 13 chr2 76401190 76401501 -176855082 - AluJb SINE Alu -4 308 1 770 294 32 4 chr2 76402259 76402511 -176854072 - MIR SINE MIR -1 261 3 352 226 57 12 chr2 76404325 76404481 -176852102 - MIR SINE MIR -14 248 1 266 281 53 9 chr2 76405423 76405537 -176851046 + MIR SINE MIR 133 251 -11 338 233 158 8 chr2 76405579 76405819 -176850764 + HAL1b LINE L1 590 865 -483 1588 155 16 0 chr2 76406021 76406279 -176850304 - AluJo SINE Alu -12 300 39 2177 109 0 0 chr2 76406279 76406554 -176850029 - AluSx SINE Alu -37 275 1 705 248 58 0 chr2 76406561 76406767 -176849816 - L1MD2 LINE L1 -1 6358 6141 5309 132 9 17 chr2 76406789 76407654 -176848929 - L1MA5 LINE L1 0 6300 5443 342 302 171 38 chr2 76407974 76408058 -176848525 - HAL1b LINE L1 -512 836 765 2650 101 3 6 chr2 76408058 76408414 -176848169 + THE1A LTR MaLR 1 355 0 342 302 171 38 chr2 76408414 76408673 -176847910 - HAL1b LINE L1 -583 765 447 389 302 103 37 chr2 76408791 76409442 -176847141 + L1MEd LINE L1 864 1648 -842 645 191 204 7 chr2 76410013 76410165 -176846418 + AluJb SINE Alu 130 311 -1 2392 81 6 28 chr2 76410167 76410487 -176846096 + AluSp SINE Alu 1 313 0 394 305 77 26 chr2 76410487 76410782 -176845801 + L1MEd LINE L1 2302 2629 -3500 534 194 240 0 chr2 76410782 76410911 -176845672 + FRAM SINE Alu 1 160 -6 394 305 77 26 chr2 76410911 76411068 -176845515 + L1MEd LINE L1 2629 2777 -3352 622 211 62 0 chr2 76411068 76411196 -176845387 - MER58B DNA MER1_type -15 326 191 442 335 32 0 chr2 76411977 76412135 -176844448 - MIR SINE MIR -48 214 52 445 286 72 86 chr2 76412203 76412633 -176843950 + L1ME LINE L1 156 579 -5626 2116 241 85 31 chr2 76412792 76413735 -176842848 + L1ME LINE L1 571 1462 -4753 311 0 0 25 chr2 76413735 76413775 -176842808 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1796 159 3 21 chr2 76413779 76414062 -176842521 - AluJo SINE Alu -33 279 2 2116 241 85 31 chr2 76414062 76414113 -176842470 + L1ME LINE L1 1464 1601 -4614 242 188 30 40 chr2 76414110 76414211 -176842372 + L1ME LINE L1 2157 2256 -4140 * 1703 136 42 103 chr2 76414212 76414543 -176842040 + AluJb SINE Alu 1 311 -1 1333 153 42 13 chr2 76414592 76414828 -176841755 + AluJo SINE Alu 52 294 -18 1139 191 8 39 chr2 76414848 76415104 -176841479 + L1MB7 LINE L1 4794 5041 -1105 * 3773 193 35 28 chr2 76415085 76415967 -176840616 - L1M4 LINE L1 -1486 4660 3773 1543 190 3 12 chr2 76415966 76416293 -176840290 + L1MB7 LINE L1 5079 5402 -744 * 743 172 16 0 chr2 76416293 76416415 -176840168 + FLAM_C SINE Alu 1 124 -19 1398 147 0 0 chr2 76416416 76416634 -176839949 + L1MB7 LINE L1 5391 5608 -576 1430 146 0 8 chr2 76416634 76416877 -176839706 + L1MB3 LINE L1 5940 6183 0 3235 162 31 0 chr2 76416877 76417447 -176839136 + L1MB7 LINE L1 5593 6183 -1 273 216 288 24 chr2 76417448 76417573 -176839010 + HAL1b LINE L1 1191 1348 0 2231 98 6 19 chr2 76418521 76418837 -176837746 - AluSx SINE Alu 0 312 1 323 213 13 0 chr2 76418837 76418912 -176837671 + L2 LINE L2 852 927 -2387 2513 68 0 37 chr2 76418913 76419236 -176837347 - AluSx SINE Alu -1 311 1 966 182 24 0 chr2 76419241 76419411 -176837172 - FRAM SINE Alu -2 174 1 2386 234 99 9 chr2 76420180 76420724 -176835859 + MLT1E LTR MaLR 1 593 0 2799 286 86 36 chr2 76420754 76421232 -176835351 - L2 LINE L2 -923 2391 1939 2279 108 0 3 chr2 76421232 76421529 -176835054 + AluSx SINE Alu 1 296 -16 2799 286 86 36 chr2 76421529 76422554 -176834029 - L2 LINE L2 -1375 1939 812 540 0 0 0 chr2 76423682 76423742 -176832841 + (TTCC)n Simple_repeat Simple_repeat 3 62 0 2009 146 0 10 chr2 76423742 76424030 -176832553 - AluJo SINE Alu -27 285 1 2334 95 7 3 chr2 76424458 76424764 -176831819 - AluY SINE Alu -4 307 1 1137 167 11 0 chr2 76424933 76425119 -176831464 + MER5A DNA MER1_type 1 188 -1 2107 107 7 0 chr2 76425739 76426019 -176830564 - AluSx SINE Alu -30 282 1 571 232 119 6 chr2 76426040 76426208 -176830375 + MIR SINE MIR 64 250 -12 367 189 26 85 chr2 76426631 76426784 -176829799 - L1ME4a LINE L1 -18 6103 5960 192 152 0 0 chr2 76426793 76426826 -176829757 + (CA)n Simple_repeat Simple_repeat 1 33 0 2407 97 0 0 chr2 76426848 76427147 -176829436 - AluSx SINE Alu -13 299 1 2576 242 67 20 chr2 76427394 76428785 -176827798 - L1ME3A LINE L1 -24 6146 4693 1147 261 66 6 chr2 76428786 76429104 -176827479 + L1ME3A LINE L1 5490 5826 -344 599 255 147 12 chr2 76429113 76429364 -176827219 + LTR33 LTR ERVL 233 517 -4 378 0 0 0 chr2 76429367 76429409 -176827174 + (CA)n Simple_repeat Simple_repeat 2 43 0 323 304 80 7 chr2 76429546 76429684 -176826899 - MIR SINE MIR -66 196 49 621 155 10 0 chr2 76429729 76429826 -176826757 - MER5B DNA MER1_type -3 175 78 21 71 0 0 chr2 76429835 76429877 -176826706 + AT_rich Low_complexity Low_complexity 1 42 0 280 254 112 71 chr2 76429877 76430074 -176826509 - L1ME3A LINE L1 -1 6169 5965 243 0 0 0 chr2 76430076 76430103 -176826480 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1545 167 0 60 chr2 76430105 76430255 -176826328 - AluJo SINE Alu -30 282 157 2311 101 3 0 chr2 76430255 76430552 -176826031 - AluSq SINE Alu -15 298 1 1545 167 0 60 chr2 76430552 76430701 -176825882 - AluJo SINE Alu -155 157 1 917 252 82 48 chr2 76430867 76431244 -176825339 - L1MC5 LINE L1 -518 7443 7054 721 197 7 13 chr2 76431244 76431507 -176825076 + MLT1A1 LTR MaLR 1 313 -52 26 0 0 0 chr2 76431514 76431540 -176825043 + AT_rich Low_complexity Low_complexity 1 26 0 2239 107 0 0 chr2 76431540 76431829 -176824754 - AluSg SINE Alu -21 289 1 1914 160 0 0 chr2 76431831 76432124 -176824459 - AluJo SINE Alu -19 293 1 373 206 0 0 chr2 76432124 76432187 -176824396 + MLT1A1 LTR MaLR 301 363 -2 244 163 0 0 chr2 76432189 76432232 -176824351 - L1MC5 LINE L1 -903 7058 7016 22 0 0 0 chr2 76432232 76432254 -176824329 + AT_rich Low_complexity Low_complexity 1 22 0 2560 29 0 0 chr2 76432254 76432535 -176824048 - L1PA5 LINE L1 -9 6145 5865 2372 17 41 0 chr2 76432535 76432885 -176823698 + L1P2 LINE L1 5069 5444 -710 332 202 8 101 chr2 76432883 76433002 -176823581 - L1MC5 LINE L1 -931 7030 6923 * 294 302 69 0 chr2 76433091 76433207 -176823376 + L1MC5 LINE L1 7289 7412 -549 * 1080 215 10 67 chr2 76433203 76433363 -176823220 - L1MC5 LINE L1 -1050 6992 6824 5232 138 85 44 chr2 76433363 76434257 -176822326 - MER21A LTR ERV1 0 931 1 1080 215 10 67 chr2 76434257 76434400 -176822183 - L1MC5 LINE L1 -1218 6824 6624 4333 170 34 54 chr2 76434688 76435144 -176821439 + L1MB8 LINE L1 4915 5379 -799 2361 98 0 7 chr2 76435144 76435450 -176821133 + AluSx SINE Alu 1 304 -8 4333 170 34 54 chr2 76435450 76436284 -176820299 + L1MB8 LINE L1 5379 6177 -1 23 33 0 0 chr2 76436336 76436366 -176820217 + AT_rich Low_complexity Low_complexity 1 30 0 2234 98 16 16 chr2 76436417 76436722 -176819861 + AluSx SINE Alu 1 305 -7 327 281 85 35 chr2 76436797 76436996 -176819587 - HAL1b LINE L1 -740 608 400 2349 90 6 3 chr2 76437052 76437363 -176819220 - AluSq SINE Alu -1 312 1 1558 152 46 19 chr2 76437443 76437706 -176818877 - AluSg SINE Alu -30 280 11 2113 104 37 0 chr2 76437812 76438109 -176818474 + AluSx SINE Alu 1 308 -4 334 314 94 63 chr2 76438500 76438755 -176817828 - HAL1b LINE L1 -1025 323 61 566 206 0 0 chr2 76439289 76439396 -176817187 - MER53 DNA DNA -80 109 3 2137 113 3 28 chr2 76439702 76440040 -176816543 - AluSx SINE Alu 0 312 1 429 274 124 17 chr2 76440059 76440300 -176816283 - L1MC5 LINE L1 -1861 5947 5681 265 290 180 54 chr2 76441049 76441366 -176815217 + HERVL LTR ERVL 298 654 -5110 2311 105 0 3 chr2 76441829 76442134 -176814449 + AluSq SINE Alu 1 304 -9 5716 293 69 80 chr2 76442344 76444338 -176812245 + HERVL LTR ERVL 1497 3513 -2251 229 255 20 39 chr2 76444338 76444440 -176812143 - L1MC5 LINE L1 -33 7928 7829 261 0 0 0 chr2 76444440 76444469 -176812114 + (TA)n Simple_repeat Simple_repeat 1 29 0 441 0 0 0 chr2 76444468 76444517 -176812066 + (GA)n Simple_repeat Simple_repeat 2 50 0 5716 293 69 80 chr2 76444469 76444518 -176812065 + HERVL LTR ERVL 3512 3560 -2204 1567 116 149 4 chr2 76444518 76444760 -176811823 - AluSx SINE Alu -35 277 1 5716 293 69 80 chr2 76444760 76446050 -176810533 + HERVL LTR ERVL 3560 4839 -925 1689 193 42 73 chr2 76446050 76446459 -176810124 + MSTD LTR MaLR 1 396 0 5716 293 69 80 chr2 76446459 76446812 -176809771 + HERVL LTR ERVL 4839 5195 -569 22 0 0 0 chr2 76446997 76447019 -176809564 + AT_rich Low_complexity Low_complexity 1 22 0 349 250 45 0 chr2 76447076 76447164 -176809419 - MLT1H1 LTR MaLR 0 555 464 22 0 0 0 chr2 76447202 76447224 -176809359 + AT_rich Low_complexity Low_complexity 1 22 0 476 331 67 16 chr2 76447496 76447750 -176808833 + HERVL LTR ERVL 4105 4371 -1283 180 179 0 0 chr2 76447823 76447862 -176808721 + (CATA)n Simple_repeat Simple_repeat 2 40 0 2223 113 0 0 chr2 76447874 76448175 -176808408 + AluSq SINE Alu 13 313 0 21 82 0 0 chr2 76448202 76448251 -176808332 + AT_rich Low_complexity Low_complexity 1 49 0 244 320 10 20 chr2 76448534 76448634 -176807949 - L2 LINE L2 0 3313 3215 207 114 0 0 chr2 76449651 76449686 -176806897 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1106 211 216 34 chr2 76449694 76450158 -176806425 - L2 LINE L2 -102 3211 2665 474 305 123 21 chr2 76450552 76450739 -176805844 + MIR SINE MIR 24 229 -33 2667 184 21 53 chr2 76450871 76451435 -176805148 + MLT2B3 LTR ERVL 1 546 -8 447 261 15 15 chr2 76451671 76451801 -176804782 - LTR67 LTR ERVL 0 557 428 462 202 271 0 chr2 76452360 76452489 -176804094 - MER5A DNA MER1_type 0 189 26 798 308 131 14 chr2 76452781 76453422 -176803161 - L2 LINE L2 0 3313 2582 659 182 24 16 chr2 76453606 76453776 -176802807 + MLT1A1 LTR MaLR 55 286 -79 * 1350 173 58 36 chr2 76453775 76454052 -176802531 + MSTD LTR MaLR 114 396 0 192 295 0 0 chr2 76454058 76454119 -176802464 + L2 LINE L2 2019 2079 -1235 1577 164 180 13 chr2 76454734 76455045 -176801538 + MLT1A1 LTR MaLR 1 363 -2 400 256 80 0 chr2 76455154 76455279 -176801304 + L2 LINE L2 3171 3305 -8 285 192 0 0 chr2 76455291 76455343 -176801240 + MER89 LTR ERV1 6 57 -502 851 224 0 0 chr2 76455344 76455491 -176801092 + FRAM SINE Alu 1 146 -30 2781 171 26 12 chr2 76455500 76456008 -176800575 + MER89 LTR ERV1 45 559 0 2003 134 3 0 chr2 76456401 76456693 -176799890 - AluSx SINE Alu -19 293 1 2136 97 4 0 chr2 76456774 76457078 -176799505 + AluSg SINE Alu 1 305 0 1588 209 35 6 chr2 76457446 76457761 -176798822 - MLT1A2 LTR MaLR -16 358 35 1821 115 4 0 chr2 76457763 76458015 -176798568 - AluSx SINE Alu -9 303 51 709 274 120 49 chr2 76458332 76458657 -176797926 - L2 LINE L2 0 3313 2966 236 186 17 0 chr2 76458845 76458904 -176797679 + GA-rich Low_complexity Low_complexity 3 62 0 253 200 0 0 chr2 76459369 76459414 -176797169 + L2 LINE L2 3214 3258 -14 716 188 26 0 chr2 76459510 76459627 -176796956 + FLAM_A SINE Alu 13 132 -10 1864 241 46 27 chr2 76459704 76459939 -176796644 - MER90 LTR ERV1 -52 562 333 1724 160 45 0 chr2 76459939 76460227 -176796356 + AluJb SINE Alu 1 301 -11 1864 241 46 27 chr2 76460227 76460515 -176796068 - MER90 LTR ERV1 -281 333 29 298 342 23 46 chr2 76460983 76461243 -176795340 - MER89-int LTR ERV1 -444 6357 6104 342 146 11 45 chr2 76461857 76461946 -176794637 + CT-rich Low_complexity Low_complexity 1 86 0 1408 196 56 7 chr2 76461947 76462232 -176794351 - AluJo SINE Alu -13 299 1 1530 300 57 42 chr2 76462444 76463420 -176793163 - MER89-int LTR ERV1 -1718 2929 1908 38 0 0 0 chr2 76463477 76463515 -176793068 + AT_rich Low_complexity Low_complexity 1 38 0 395 288 122 0 chr2 76463744 76463883 -176792700 + MIR SINE MIR 40 195 -67 267 281 269 6 chr2 76463905 76464065 -176792518 - MIR SINE MIR -48 214 13 219 139 0 0 chr2 76464498 76464534 -176792049 + (CCCCCT)n Simple_repeat Simple_repeat 6 41 0 429 20 0 0 chr2 76464593 76464643 -176791940 + (GGA)n Simple_repeat Simple_repeat 1 50 0 728 171 14 125 chr2 76465600 76465816 -176790767 - MER3 DNA MER1_type 0 209 18 747 318 164 45 chr2 76465885 76466847 -176789736 - L2 LINE L2 -1 3271 2201 4716 136 37 65 chr2 76466960 76467482 -176789101 - L1PB4 LINE L1 -2 6154 5619 629 140 158 0 chr2 76467482 76467596 -176788987 - FLAM_C SINE Alu 0 133 2 4716 136 37 65 chr2 76467596 76468298 -176788285 - L1PB4 LINE L1 -537 5619 4955 2209 93 4 0 chr2 76468393 76468672 -176787911 - AluSg SINE Alu -30 280 1 2226 75 0 29 chr2 76469453 76469759 -176786824 - AluSc SINE Alu -12 297 1 2519 56 3 0 chr2 76469972 76470277 -176786306 - AluY SINE Alu -5 306 1 500 279 97 52 chr2 76470582 76470944 -176785639 - L1M4 LINE L1 -2664 3482 3105 333 0 0 0 chr2 76470945 76470982 -176785601 + (TG)n Simple_repeat Simple_repeat 2 38 0 3356 186 53 24 chr2 76471023 76471891 -176784692 - L1MB8 LINE L1 -2 6176 5244 637 176 42 7 chr2 76471930 76472072 -176784511 - L1MB8 LINE L1 -1074 5072 4926 1133 232 23 4 chr2 76472092 76472351 -176784232 - L1PB4 LINE L1 0 6156 5893 1834 177 30 60 chr2 76472351 76472502 -176784081 - L1MB8 LINE L1 -1227 4919 4765 1908 145 7 16 chr2 76472502 76472805 -176783778 - AluJb SINE Alu -12 300 1 1834 177 30 60 chr2 76472805 76473045 -176783538 - L1MB8 LINE L1 -1381 4765 4540 2024 121 35 0 chr2 76473045 76473334 -176783249 - AluSx SINE Alu -13 299 1 1834 177 30 60 chr2 76473334 76473375 -176783208 - L1MB8 LINE L1 -1606 4540 4499 1651 123 14 56 chr2 76473378 76473663 -176782920 - Tigger3(Golem) DNA MER2_type 0 3032 2760 354 138 0 0 chr2 76473664 76473722 -176782861 + (TA)n Simple_repeat Simple_repeat 2 59 0 235 160 20 0 chr2 76473722 76473772 -176782811 + LTR66 LTR ERVL 398 448 -162 1874 137 18 0 chr2 76473783 76474061 -176782522 - AluSx SINE Alu -29 283 1 425 231 0 0 chr2 76474061 76474139 -176782444 - Tigger3(Golem) DNA MER2_type -2951 78 1 2271 212 140 25 chr2 76474139 76474556 -176782027 - L1MB8 LINE L1 -1645 4501 4134 1236 60 250 0 chr2 76474556 76474740 -176781843 + MER30 DNA MER1_type 1 230 0 2271 212 140 25 chr2 76474740 76474986 -176781597 - L1MB8 LINE L1 -2012 4134 3918 324 0 0 0 chr2 76474986 76475022 -176781561 + (CA)n Simple_repeat Simple_repeat 2 37 0 2271 212 140 25 chr2 76475022 76475318 -176781265 - L1MB8 LINE L1 -2228 3918 3454 2452 67 0 3 chr2 76475326 76475626 -176780957 - AluY SINE Alu -12 299 1 2122 193 48 30 chr2 76475627 76476130 -176780453 - L1MCa LINE L1 -5884 542 31 1935 114 14 14 chr2 76476144 76476433 -176780150 - AluSq SINE Alu -7 306 18 657 195 47 0 chr2 76476442 76476570 -176780013 - L1MC1 LINE L1 -1 6332 6199 6625 233 51 23 chr2 76476570 76477530 -176779053 - L1M4 LINE L1 -904 5242 4310 2245 92 0 30 chr2 76477530 76477833 -176778750 - AluSg SINE Alu -16 294 1 6625 233 51 23 chr2 76477833 76477979 -176778604 - L1M4 LINE L1 -1836 4310 4170 2514 164 48 19 chr2 76477979 76478393 -176778190 - MSTB LTR MaLR 0 426 1 6625 233 51 23 chr2 76478393 76478629 -176777954 - L1M4 LINE L1 -1976 4170 3942 1818 153 7 26 chr2 76478629 76478936 -176777647 - AluJb SINE Alu -11 301 1 6625 233 51 23 chr2 76478936 76479477 -176777106 - L1M4 LINE L1 -2204 3942 3417 1922 160 3 0 chr2 76479477 76479777 -176776806 - AluSx SINE Alu -11 301 1 6625 233 51 23 chr2 76479777 76480255 -176776328 - L1M4 LINE L1 -2729 3417 2808 2033 210 131 19 chr2 76480266 76480703 -176775880 - L1MA9 LINE L1 -38 6274 5751 380 82 16 0 chr2 76480703 76480764 -176775819 + (TG)n Simple_repeat Simple_repeat 2 63 0 2033 210 131 19 chr2 76480764 76480943 -176775640 - L1MA9 LINE L1 -561 5751 5593 1911 139 49 0 chr2 76480961 76481248 -176775335 - AluSx SINE Alu -9 303 3 8000 190 51 18 chr2 76481404 76481552 -176775031 + L1 LINE L1 3377 3519 -2627 2078 145 0 6 chr2 76481552 76481863 -176774720 + AluJb SINE Alu 4 312 0 8000 190 51 18 chr2 76481863 76482564 -176774019 + L1 LINE L1 3519 4195 -1951 2060 130 7 3 chr2 76482564 76482864 -176773719 + AluSx SINE Alu 1 301 -11 8000 190 51 18 chr2 76482864 76483908 -176772675 + L1 LINE L1 4195 5334 -812 263 328 12 65 chr2 76484288 76484535 -176772048 - L2 LINE L2 -1913 1401 1168 402 194 0 0 chr2 76484899 76484966 -176771617 + AluJ/FLAM SINE Alu 1 67 -245 2756 257 62 19 chr2 76484966 76486101 -176770482 - L1MEc LINE L1 -2549 4408 3225 911 157 46 7 chr2 76486101 76486254 -176770329 - AluSg/x SINE Alu -22 288 130 793 293 40 34 chr2 76486257 76486884 -176769699 - L1MEc LINE L1 -3726 3231 2638 1437 180 53 21 chr2 76486890 76487174 -176769409 - AluJo SINE Alu -14 298 6 2154 254 69 33 chr2 76487243 76488351 -176768232 - L1MEc LINE L1 -4551 2408 1262 1537 235 43 23 chr2 76488366 76488758 -176767825 - L1MEc LINE L1 -6027 832 433 1619 242 71 30 chr2 76488983 76489474 -176767109 + LTR53 LTR ERVL 1 511 -8 316 264 99 0 chr2 76490133 76490254 -176766329 - L1MDb LINE L1 -3689 2955 2823 1603 178 13 36 chr2 76490263 76490708 -176765875 - AluJo SINE Alu 0 438 1 668 193 97 38 chr2 76490746 76490828 -176765755 - L1MDb LINE L1 -3890 2754 2678 2123 107 0 0 chr2 76490828 76491109 -176765474 - AluSc SINE Alu -10 299 19 668 193 97 38 chr2 76491109 76491264 -176765319 - L1MDb LINE L1 -3966 2678 2503 2228 98 0 7 chr2 76491274 76491571 -176765012 - AluSx SINE Alu -17 295 1 486 177 51 19 chr2 76491571 76491724 -176764859 - L1MDb LINE L1 -4858 1786 1539 213 132 0 0 chr2 76491739 76491777 -176764806 + (TC)n Simple_repeat Simple_repeat 1 38 0 1627 128 8 4 chr2 76491777 76492011 -176764572 - AluSq SINE Alu -78 235 1 1318 206 87 9 chr2 76492011 76492346 -176764237 - L1MDb LINE L1 -5394 1253 893 249 348 54 11 chr2 76492394 76492486 -176764097 - L1MDb LINE L1 -5645 1002 907 462 203 29 170 chr2 76492802 76493078 -176763505 - L1MDb LINE L1 -6200 444 208 24 53 0 0 chr2 76493383 76493421 -176763162 + AT_rich Low_complexity Low_complexity 1 38 0 918 157 0 0 chr2 76493421 76493561 -176763022 + MER46A DNA MER2_type 1 140 -96 241 263 113 12 chr2 76493616 76493696 -176762887 - MIR SINE MIR -92 170 83 455 355 162 6 chr2 76494019 76494661 -176761922 + L2 LINE L2 2174 2975 -339 293 296 114 51 chr2 76494823 76494999 -176761584 + L2 LINE L2 3086 3272 0 22 56 0 0 chr2 76496176 76496212 -176760371 + AT_rich Low_complexity Low_complexity 1 36 0 1659 139 26 20 chr2 76496386 76496688 -176759895 - L1MA3 LINE L1 0 6305 6002 532 206 28 9 chr2 76498036 76498143 -176758440 + MER5A DNA MER1_type 9 117 -72 511 180 144 54 chr2 76498246 76498413 -176758170 + L2 LINE L2 3132 3313 0 730 220 105 5 chr2 76498727 76498927 -176757656 + LTR40c LTR ERVL 234 453 -12 228 277 0 0 chr2 76499087 76499152 -176757431 - L1ME LINE L1 -422 5935 5871 3018 252 102 2 chr2 76507053 76508146 -176748437 - L1ME LINE L1 -2747 3635 2434 1484 205 189 37 chr2 76508174 76508419 -176748164 - L1ME LINE L1 -4051 2333 2126 1505 131 9 5 chr2 76508419 76508640 -176747943 - AluSx SINE Alu -90 222 1 1484 205 189 37 chr2 76508640 76508722 -176747861 - L1ME LINE L1 -4258 2126 2058 2309 123 59 50 chr2 76508722 76509144 -176747439 - MSTC LTR MaLR -2 426 1 1484 205 189 37 chr2 76509144 76509409 -176747174 - L1ME LINE L1 -4326 2058 1650 1202 115 0 0 chr2 76509410 76509567 -176747016 - AluSx SINE Alu -149 163 7 22 35 0 0 chr2 76510540 76510569 -176746014 + AT_rich Low_complexity Low_complexity 1 29 0 1895 151 10 19 chr2 76510580 76510891 -176745692 - AluJo SINE Alu -4 308 1 612 205 16 8 chr2 76511003 76511125 -176745458 - FLAM_C SINE Alu -17 126 4 1257 41 5 55 chr2 76511127 76511377 -176745206 - Charlie1 DNA MER1_type -23 2738 2477 1558 181 68 138 chr2 76511377 76511822 -176744761 - MLT2B1 LTR ERVL 0 520 120 2251 109 3 10 chr2 76511822 76512135 -176744448 + AluSx SINE Alu 1 311 -1 1558 181 68 138 chr2 76512135 76512248 -176744335 - MLT2B1 LTR ERVL -400 120 1 1257 41 5 55 chr2 76512248 76512429 -176744154 - Charlie1 DNA MER1_type -284 2477 2 1967 185 75 23 chr2 76512736 76513179 -176743404 + MLT1C LTR MaLR 1 466 -1 286 246 32 63 chr2 76513656 76513782 -176742801 + L2 LINE L2 1716 1837 -1477 3340 220 126 48 chr2 76513807 76514223 -176742360 - L1MC4 LINE L1 -743 5403 5021 2173 100 10 26 chr2 76514223 76514534 -176742049 + AluSx SINE Alu 1 306 -6 3340 220 126 48 chr2 76514534 76515142 -176741441 - L1MC4 LINE L1 -1125 5021 4926 1023 193 18 61 chr2 76515142 76515370 -176741213 - MER20 DNA MER1_type 0 219 2 3340 220 126 48 chr2 76515370 76516235 -176740348 - L1MC4 LINE L1 -1220 4926 4130 447 293 88 24 chr2 76516296 76516501 -176740082 + L2 LINE L2 1894 2111 -1203 316 281 83 0 chr2 76516735 76516831 -176739752 + L2 LINE L2 2179 2282 -1032 1125 295 176 15 chr2 76517026 76517741 -176738842 - L2 LINE L2 -1621 1693 864 1363 188 32 14 chr2 76518551 76518828 -176737755 + AluJo SINE Alu 22 303 -9 549 95 32 42 chr2 76519300 76519395 -176737188 + FLAM_A SINE Alu 36 129 -13 818 204 52 129 chr2 76519606 76519954 -176736629 + MER5C DNA MER1_type 1 321 -3 220 296 42 14 chr2 76521435 76521506 -176735077 - MIR SINE MIR -102 160 88 248 245 36 101 chr2 76521753 76521892 -176734691 + L3 LINE CR1 1174 1303 -274 218 200 231 0 chr2 76521890 76521955 -176734628 - L2 LINE L2 0 3272 3193 * 639 232 215 6 chr2 76522035 76522212 -176734371 + MER58C DNA MER1_type 1 214 -1 292 335 151 33 chr2 76522232 76522444 -176734139 + L3 LINE CR1 1338 1574 -3 384 238 0 59 chr2 76523275 76523376 -176733207 - L2 LINE L2 0 3313 3219 1824 198 124 7 chr2 76523685 76524145 -176732438 - Charlie1b DNA MER1_type 0 523 10 652 285 83 37 chr2 76524189 76524431 -176732152 + MIR SINE MIR 10 262 0 1787 190 0 0 chr2 76525482 76525792 -176730791 - AluJo SINE Alu -2 310 1 35 54 0 0 chr2 76526085 76526141 -176730442 + AT_rich Low_complexity Low_complexity 1 56 0 1449 61 0 0 chr2 76529226 76529406 -176727177 - L1PA7 LINE L1 -21 6133 5954 26 50 0 0 chr2 76529731 76529771 -176726812 + AT_rich Low_complexity Low_complexity 1 40 0 446 256 121 72 chr2 76529862 76530085 -176726498 - MIR SINE MIR -28 234 1 349 293 108 6 chr2 76530718 76530875 -176725708 + MIR SINE MIR 54 226 -36 2220 118 0 3 chr2 76530996 76531300 -176725283 - AluSq SINE Alu -10 303 1 2443 67 0 0 chr2 76531795 76532093 -176724490 - AluY SINE Alu -13 298 1 345 136 25 12 chr2 76532250 76532265 -176724318 + (TA)n Simple_repeat Simple_repeat 1 14 -68 1954 149 55 3 chr2 76532265 76532594 -176723989 + MER7A DNA MER2_type 3 346 0 345 136 25 12 chr2 76532594 76532659 -176723924 + (TA)n Simple_repeat Simple_repeat 14 82 0 1028 162 27 68 chr2 76532731 76532953 -176723630 - MER20 DNA MER1_type 0 219 7 21 57 0 0 chr2 76534082 76534117 -176722466 + AT_rich Low_complexity Low_complexity 1 35 0 1649 155 33 33 chr2 76534144 76534505 -176722078 - MLT1A1 LTR MaLR 0 365 5 1526 187 8 0 chr2 76534802 76535053 -176721530 - AluJo SINE Alu -54 258 6 399 274 58 16 chr2 76535571 76535761 -176720822 - L1ME3A LINE L1 -230 5940 5743 359 311 16 0 chr2 76535781 76535903 -176720680 + MIR SINE MIR 139 262 0 713 297 93 91 chr2 76536260 76536595 -176719988 - L3 LINE CR1 -410 1167 829 1983 113 0 39 chr2 76536595 76536879 -176719704 - AluSx SINE Alu -19 293 21 713 297 93 91 chr2 76536879 76537092 -176719491 - L3 LINE CR1 -748 829 618 2315 106 0 3 chr2 76537107 76537410 -176719173 + AluSx SINE Alu 1 302 -10 378 235 137 13 chr2 76537586 76537739 -176718844 - L1ME4a LINE L1 -208 5913 5742 706 275 186 25 chr2 76537739 76538136 -176718447 - L2 LINE L2 -1 3312 2852 811 261 34 25 chr2 76538154 76538392 -176718191 + MER20B DNA MER1_type 1 240 -543 3373 232 99 15 chr2 76538405 76539484 -176717099 - L1MC4 LINE L1 -405 7637 6468 247 208 13 0 chr2 76539568 76539645 -176716938 - L1M4 LINE L1 -3169 2977 2900 252 286 18 27 chr2 76539667 76539779 -176716804 + L1ME3 LINE L1 1552 1662 -4734 43371 38 5 11 chr2 76539810 76546001 -176710582 + L1PA4 LINE L1 3 6152 -3 2263 255 82 16 chr2 76546328 76547447 -176709136 + L1ME3 LINE L1 5028 6229 -2 377 220 70 59 chr2 76547482 76547668 -176708915 + L1MB1 LINE L1 4357 4544 -1602 684 134 174 7 chr2 76547705 76547717 -176708866 - L1M4c LINE L1 -3886 2498 2489 1907 149 34 6 chr2 76547717 76548066 -176708517 - L1MB3 LINE L1 0 6183 5825 684 134 174 7 chr2 76548066 76548202 -176708381 - L1M4c LINE L1 -3895 2489 2325 347 285 86 27 chr2 76548575 76548831 -176707752 + L1M4 LINE L1 3085 3355 -2791 3361 214 103 13 chr2 76549380 76550627 -176705956 - L1 LINE L1 -2820 3562 2185 3921 144 39 52 chr2 76550673 76551575 -176705008 + L1MB1 LINE L1 5127 6027 -141 3619 249 126 46 chr2 76551856 76553423 -176703160 + L1M4 LINE L1 17 1708 -4834 24 53 0 0 chr2 76553574 76553612 -176702971 + AT_rich Low_complexity Low_complexity 1 38 0 351 0 0 0 chr2 76553721 76553760 -176702823 + (TG)n Simple_repeat Simple_repeat 2 40 0 748 242 0 0 chr2 76553831 76553992 -176702591 - AluJb SINE Alu -19 293 133 3102 186 111 23 chr2 76554129 76555223 -176701360 - L1MB8 LINE L1 -5 6173 4983 4732 168 16 30 chr2 76555233 76556164 -176700419 - L1MB2 LINE L1 0 6171 5254 511 248 111 50 chr2 76556178 76556376 -176700207 - MER6B DNA MER2_type 0 210 1 3360 244 150 19 chr2 76556376 76557543 -176699040 - L1MB2 LINE L1 -905 5241 3922 3333 53 0 2 chr2 76557978 76558448 -176698135 - L1PA8 LINE L1 0 6172 5746 4516 183 27 7 chr2 76558496 76559422 -176697161 - L1MD1 LINE L1 0 6242 5298 42239 37 23 1 chr2 76559427 76565449 -176691134 - L1PA2 LINE L1 -1 6154 1 313 160 0 173 chr2 76565449 76565605 -176690978 - L1MD1 LINE L1 -813 5333 5205 2033 221 43 15 chr2 76565654 76566116 -176690467 - L1MDa LINE L1 -6022 518 44 1792 151 22 19 chr2 76566116 76566427 -176690156 + AluJb SINE Alu 1 312 0 7862 177 116 27 chr2 76566427 76568039 -176688544 - MER52A LTR ERV1 0 1755 1 503 278 96 63 chr2 76568266 76568737 -176687846 - MLT1J LTR MaLR -8 503 5 213 94 0 0 chr2 76571213 76571245 -176685338 + (TC)n Simple_repeat Simple_repeat 2 33 0 599 230 58 0 chr2 76571273 76571412 -176685171 + L1MC4a LINE L1 7203 7349 -459 208 360 34 0 chr2 76571681 76571770 -176684813 - MIR SINE MIR -49 213 122 242 308 205 0 chr2 76571874 76571991 -176684592 + MIR3 SINE MIR 47 187 -21 1351 142 29 0 chr2 76572099 76572304 -176684279 - AluSg/x SINE Alu -19 293 83 369 343 52 8 chr2 76572547 76572681 -176683902 - MIR SINE MIR -97 165 26 279 0 0 0 chr2 76572695 76572726 -176683857 + (CA)n Simple_repeat Simple_repeat 2 32 0 243 174 46 37 chr2 76572736 76572789 -176683794 + (TA)n Simple_repeat Simple_repeat 2 53 -58 2162 107 10 0 chr2 76572789 76573079 -176683504 + AluSp SINE Alu 1 293 -20 243 174 46 37 chr2 76573079 76573134 -176683449 + (TA)n Simple_repeat Simple_repeat 53 111 0 339 136 61 15 chr2 76573136 76573202 -176683381 - L1MD3 LINE L1 -9 7986 7918 916 274 127 53 chr2 76573202 76573691 -176682892 - MLT1F LTR MaLR -8 534 10 4378 236 139 66 chr2 76573692 76574566 -176682017 - L1MC3 LINE L1 -75 7970 7161 2279 95 0 3 chr2 76574566 76574884 -176681699 - AluSx SINE Alu 0 317 1 4378 236 139 66 chr2 76574884 76576429 -176680154 - L1MC3 LINE L1 -884 7161 5387 538 242 84 19 chr2 76576445 76576635 -176679948 - L1MC3 LINE L1 -4659 1787 1578 869 83 15 15 chr2 76576652 76576784 -176679799 - L1PB2 LINE L1 -2 6149 6018 1065 109 109 0 chr2 76576800 76576974 -176679609 - Tigger1 DNA MER2_type 0 2418 2226 1596 89 43 0 chr2 76577005 76577240 -176679343 - L1PB2 LINE L1 -263 5888 5644 243 206 59 0 chr2 76577227 76577295 -176679288 - L1MC3 LINE L1 -4857 1549 1478 * 1907 123 82 3 chr2 76577295 76577611 -176678972 - Tigger1 DNA MER2_type 0 2418 2078 5433 90 33 39 chr2 76577622 76577860 -176678723 - L1MA1 LINE L1 0 6302 6064 180 0 0 0 chr2 76577860 76577880 -176678703 + (TG)n Simple_repeat Simple_repeat 1 20 0 5433 90 33 39 chr2 76577880 76578521 -176678062 - L1MA1 LINE L1 -238 6064 5428 1877 208 0 7 chr2 76578532 76578935 -176677648 - L1MA1 LINE L1 -826 5320 4921 229 270 0 0 chr2 76578945 76579008 -176677575 - L1MC3 LINE L1 -5353 1053 991 2111 179 46 14 chr2 76579019 76579433 -176677150 + MSTB1 LTR MaLR 6 432 0 386 293 47 83 chr2 76579434 76579687 -176676896 - L1MC3 LINE L1 -5409 1000 757 258 246 14 0 chr2 76580162 76580231 -176676352 - L1MC3 LINE L1 -5935 461 392 2517 228 90 30 chr2 76580292 76582049 -176674534 - L1ME LINE L1 -615 5547 3847 423 301 97 0 chr2 76582252 76582438 -176674145 - L1MC4 LINE L1 -143 7899 7696 5476 39 0 12 chr2 76582438 76583108 -176673475 - L1PA3 LINE L1 0 6155 5494 301 229 62 0 chr2 76583236 76583332 -176673251 - L1MC4 LINE L1 -714 7328 7227 1738 223 59 66 chr2 76583444 76584109 -176672474 - L1MD2 LINE L1 -38 6321 5662 * 28418 100 21 83 chr2 76584085 76587543 -176669040 - L1PA7 LINE L1 -2 6152 2482 2358 81 13 10 chr2 76587543 76587853 -176668730 - AluY SINE Alu 0 311 1 28418 100 21 83 chr2 76587853 76588708 -176667875 - L1PA7 LINE L1 -3672 2482 1576 180 0 0 0 chr2 76588708 76588728 -176667855 + (TTA)n Simple_repeat Simple_repeat 2 21 0 28418 100 21 83 chr2 76588728 76590970 -176665613 - L1PA7 LINE L1 -4578 1576 12 1446 188 66 65 chr2 76590982 76591029 -176665554 - L1MD2 LINE L1 -665 5694 5649 981 224 49 0 chr2 76591029 76591234 -176665349 + MER20 DNA MER1_type 1 215 -4 1446 188 66 65 chr2 76591234 76591410 -176665173 - L1MD2 LINE L1 -710 5649 5475 2221 93 0 59 chr2 76591410 76591731 -176664852 - AluSg SINE Alu -8 302 1 1446 188 66 65 chr2 76591731 76591983 -176664600 - L1MD2 LINE L1 -884 5475 5222 1077 219 79 11 chr2 76592003 76592281 -176664302 - L1MC4 LINE L1 -994 7048 6752 488 264 10 16 chr2 76593390 76593583 -176663000 - L1M4b LINE L1 -3821 3136 2945 477 260 83 17 chr2 76593610 76593898 -176662685 - L1M4b LINE L1 -4240 2898 2592 210 284 25 0 chr2 76593900 76593981 -176662602 + (TA)n Simple_repeat Simple_repeat 1 83 0 319 262 221 11 chr2 76593981 76594196 -176662387 - L1M4b LINE L1 -4512 2445 2255 377 295 70 8 chr2 76594240 76594481 -176662102 - L1M4b LINE L1 -4832 2023 1768 414 301 109 41 chr2 76594484 76594833 -176661750 - L1M4b LINE L1 -5237 1622 1352 1517 221 37 7 chr2 76594857 76595117 -176661466 + L1 LINE L1 3064 3344 -2802 333 0 0 0 chr2 76595117 76595154 -176661429 + (CA)n Simple_repeat Simple_repeat 2 38 0 1517 221 37 7 chr2 76595154 76595322 -176661261 + L1 LINE L1 3344 3505 -2641 * 2681 150 17 4 chr2 76595310 76595885 -176660698 + L1P4 LINE L1 5156 5736 -430 1678 176 20 7 chr2 76596595 76596896 -176659687 - AluJo SINE Alu -7 305 1 350 172 65 11 chr2 76596896 76596989 -176659594 - L1MD3 LINE L1 -16 7979 7882 2332 111 0 9 chr2 76596990 76597306 -176659277 - AluSq SINE Alu 0 313 1 4953 133 39 7 chr2 76597308 76598376 -176658207 - L1PA14 LINE L1 -4 6157 5047 356 162 81 0 chr2 76598379 76598453 -176658130 - L1MD3 LINE L1 -487 7508 7429 239 255 0 75 chr2 76598468 76598574 -176658009 - MLT1F1 LTR MaLR -429 138 41 253 231 0 13 chr2 76598579 76598657 -176657926 - L1MD3 LINE L1 -880 7115 7039 360 247 296 24 chr2 76600007 76600260 -176656323 - MLT1J2 LTR MaLR -138 308 1 22 35 0 0 chr2 76600663 76600692 -176655891 + AT_rich Low_complexity Low_complexity 1 29 0 2249 74 0 45 chr2 76600975 76601286 -176655297 + AluY SINE Alu 1 297 -14 2446 84 3 0 chr2 76601988 76602287 -176654296 - AluSc SINE Alu -9 300 1 23 0 0 0 chr2 76602769 76602792 -176653791 + AT_rich Low_complexity Low_complexity 1 23 0 2284 85 0 36 chr2 76603005 76603311 -176653272 + AluSx SINE Alu 1 295 -17 334 338 40 5 chr2 76603549 76603750 -176652833 + L1M4 LINE L1 4405 4612 -1534 13911 161 26 24 chr2 76603797 76603966 -176652617 - L1MA3 LINE L1 0 7724 7557 2231 101 13 16 chr2 76603966 76604272 -176652311 - AluSx SINE Alu -7 305 1 13911 161 26 24 chr2 76604272 76608238 -176648345 - L1MA3 LINE L1 -167 7557 3576 3884 117 26 17 chr2 76608255 76608560 -176648023 - L1MA3 LINE L1 -5049 2516 2215 2330 109 0 0 chr2 76608560 76608864 -176647719 - AluSx SINE Alu -8 304 1 3884 117 26 17 chr2 76608864 76609218 -176647365 - L1MA3 LINE L1 -5350 2215 1851 1755 137 66 36 chr2 76609218 76609582 -176647001 - THE1C LTR MaLR 0 375 1 9575 122 26 38 chr2 76609582 76611179 -176645404 - THE1C-int LTR MaLR 0 1580 4 802 102 66 60 chr2 76611182 76611349 -176645234 - THE1C LTR MaLR 0 375 208 7437 150 36 4 chr2 76611472 76612763 -176643820 - L1MA3 LINE L1 -5719 1846 514 260 228 54 42 chr2 76612975 76613080 -176643503 - MLT1J LTR MaLR -288 199 56 22 0 0 0 chr2 76613541 76613563 -176643020 + AT_rich Low_complexity Low_complexity 1 22 0 335 242 21 32 chr2 76613628 76613723 -176642860 + L1ME4a LINE L1 5968 6061 -60 357 301 58 26 chr2 76613755 76613911 -176642672 + L3 LINE CR1 1259 1419 -158 346 262 38 110 chr2 76613909 76614226 -176642357 + L2 LINE L2 3019 3312 -1 * 232 216 0 20 chr2 76614643 76614694 -176641889 - MER119 DNA MER1_type -3 580 531 589 234 162 4 chr2 76614826 76615114 -176641469 - MER119 DNA MER1_type -182 401 40 3319 231 54 21 chr2 76616255 76617169 -176639414 + L1M4 LINE L1 106 1049 -5493 2052 153 3 0 chr2 76617169 76617476 -176639107 + AluJo SINE Alu 1 308 -4 988 214 12 8 chr2 76617477 76617840 -176638743 + L1MB3 LINE L1 5116 5481 -702 40850 47 6 1 chr2 76617845 76623970 -176632613 + L1PA4 LINE L1 4 6153 -2 3719 156 49 0 chr2 76623983 76624616 -176631967 + L1MB3 LINE L1 5477 6146 -37 2299 120 3 0 chr2 76624616 76624925 -176631658 - AluSq SINE Alu -3 310 1 3719 156 49 0 chr2 76624925 76624965 -176631618 + L1MB3 LINE L1 6146 6183 0 529 346 83 31 chr2 76625842 76626261 -176630322 - L2 LINE L2 0 3313 2873 1743 148 107 23 chr2 76626266 76626410 -176630173 - LTR54B LTR ERV1 -22 476 346 1638 192 102 3 chr2 76626410 76626743 -176629840 + MER47A DNA MER2_type 1 366 0 1743 148 107 23 chr2 76626743 76627037 -176629546 - LTR54B LTR ERV1 -152 346 1 959 282 108 68 chr2 76627042 76627598 -176628985 - L2 LINE L2 -455 2859 2282 300 273 15 0 chr2 76628110 76628176 -176628407 + MER91 DNA MER1_type 124 190 0 292 270 235 39 chr2 76628183 76628413 -176628170 - L2 LINE L2 -1034 2280 2006 2059 126 0 0 chr2 76629282 76629604 -176626979 - AluSx SINE Alu 0 322 1 1778 156 0 59 chr2 76630282 76630603 -176625980 - AluJo SINE Alu -10 302 1 21 0 0 0 chr2 76630612 76630633 -176625950 + AT_rich Low_complexity Low_complexity 1 21 0 566 273 0 73 chr2 76630645 76630865 -176625718 + MER102a DNA MER1_type 117 320 -10 2340 87 7 3 chr2 76630870 76631180 -176625403 - AluSq SINE Alu -2 311 1 1200 42 0 0 chr2 76631501 76631645 -176624938 - L1PA3 LINE L1 -3 6152 6009 1334 233 189 97 chr2 76632257 76633564 -176623019 + HAL1 LINE L1 1075 2501 -6 410 266 119 35 chr2 76633593 76633819 -176622764 + L1ME2 LINE L1 2272 2516 -3630 2066 64 0 30 chr2 76633868 76634133 -176622450 + AluY SINE Alu 1 257 -54 686 291 121 26 chr2 76634375 76635153 -176621430 + L1ME2 LINE L1 4400 5251 -895 272 299 137 17 chr2 76635149 76635390 -176621193 + L1ME2 LINE L1 5679 5948 -216 * 2171 106 10 0 chr2 76636144 76636446 -176620137 - AluSx SINE Alu -7 305 1 1444 251 113 15 chr2 76637249 76637708 -176618875 - MLT1J LTR MaLR -7 504 1 206 216 0 0 chr2 76638602 76638653 -176617930 + (TG)n Simple_repeat Simple_repeat 2 52 0 2960 177 26 67 chr2 76639192 76640287 -176616296 + L1MB2 LINE L1 4856 5918 -253 900 250 21 25 chr2 76640294 76640574 -176616009 - LTR4 LTR ERV1 0 596 318 295 204 53 88 chr2 76640823 76640936 -176615647 - LTR4 LTR ERV1 -481 115 7 1166 169 25 13 chr2 76640952 76641188 -176615395 + L1MB2 LINE L1 5924 6162 -9 362 279 105 57 chr2 76641417 76641586 -176614997 + HAL1b LINE L1 55 214 -1134 333 0 0 0 chr2 76641586 76641623 -176614960 + (TATG)n Simple_repeat Simple_repeat 2 38 0 971 179 0 0 chr2 76641623 76641774 -176614809 - FRAM SINE Alu -15 151 1 362 279 105 57 chr2 76641774 76641918 -176614665 + HAL1b LINE L1 213 384 -964 2243 112 3 0 chr2 76642050 76642346 -176614237 + AluSp SINE Alu 1 297 -16 322 281 137 24 chr2 76642364 76642613 -176613970 + L1MDa LINE L1 2370 2646 -3894 2515 70 0 3 chr2 76642885 76643197 -176613386 + AluY SINE Alu 1 311 0 216 86 0 0 chr2 76643476 76643511 -176613072 + (TG)n Simple_repeat Simple_repeat 1 35 0 651 179 197 51 chr2 76643577 76643628 -176612955 - L1MB8 LINE L1 0 6178 6136 2116 145 0 0 chr2 76643628 76643932 -176612651 + AluSx SINE Alu 1 304 -8 651 179 197 51 chr2 76643932 76644114 -176612469 - L1MB8 LINE L1 -42 6136 5911 448 319 52 102 chr2 76644120 76644524 -176612059 + L1MEd LINE L1 268 651 -5468 4889 170 55 12 chr2 76644629 76645617 -176610966 + L1MC3 LINE L1 6756 7785 0 2324 185 25 2 chr2 76645664 76646069 -176610514 - Tigger7 DNA MER2_type -2073 414 1 2627 201 52 35 chr2 76646108 76646705 -176609878 - MER21B LTR ERV1 -154 709 103 279 233 41 0 chr2 76646861 76646934 -176609649 - MER21B LTR ERV1 -787 76 1 523 287 65 69 chr2 76647438 76647933 -176608650 + L1MC/D LINE L1 5254 5746 -2062 1910 176 0 0 chr2 76648447 76648759 -176607824 - AluSx SINE Alu 0 312 1 2240 125 0 0 chr2 76649382 76649694 -176606889 - AluSx SINE Alu 0 312 1 397 285 42 55 chr2 76649883 76650048 -176606535 + L2 LINE L2 2685 2847 -467 893 298 221 16 chr2 76650141 76650766 -176605817 - L2 LINE L2 -405 2909 2157 519 297 175 17 chr2 76650772 76651132 -176605451 - L2 LINE L2 -1376 1938 1522 231 354 128 12 chr2 76651197 76651361 -176605222 + L2 LINE L2 2923 3105 -208 244 139 0 0 chr2 76651447 76651490 -176605093 - Charlie8 DNA MER1_type -2294 123 81 1183 169 91 43 chr2 76651767 76652021 -176604562 - MLT1A1 LTR MaLR -97 268 3 315 321 0 0 chr2 76652368 76652449 -176604134 - MIR SINE MIR -88 120 40 277 183 183 41 chr2 76654760 76654929 -176601654 + Charlie7 DNA MER1_type 2420 2612 0 21 0 0 0 chr2 76654962 76654983 -176601600 + AT_rich Low_complexity Low_complexity 1 21 0 3151 168 42 19 chr2 76655138 76655764 -176600819 - L1MB5 LINE L1 -14 6160 5521 3070 187 28 18 chr2 76655777 76656701 -176599882 - L1M3 LINE L1 -602 6076 5140 570 240 53 6 chr2 76656701 76656872 -176599711 - L1M3 LINE L1 -1730 4914 4736 1891 193 69 30 chr2 76656887 76656987 -176599596 - L1M3 LINE L1 -2154 4490 4395 2314 105 0 6 chr2 76656987 76657302 -176599281 - AluSq SINE Alu 0 313 1 1891 193 69 30 chr2 76657302 76657777 -176598806 - L1M3 LINE L1 -2249 4395 3892 * 3715 207 84 41 chr2 76657768 76659436 -176597147 - L1M3 LINE L1 -2978 3666 2071 2033 129 33 0 chr2 76659436 76659739 -176596844 - AluSq SINE Alu 0 313 1 2111 87 4 0 chr2 76659739 76660004 -176596579 - AluSx SINE Alu -11 301 36 3715 207 84 41 chr2 76660004 76660453 -176596130 - L1M3 LINE L1 -4572 2072 1455 878 191 23 6 chr2 76660454 76660627 -176595956 - AluJo SINE Alu -5 307 132 3782 231 68 55 chr2 76660630 76662061 -176594522 - L1M3 LINE L1 -5083 1459 10 2187 101 17 3 chr2 76662125 76662421 -176594162 - AluSc SINE Alu -9 300 1 4762 174 36 16 chr2 76662752 76663576 -176593007 - L1MB2 LINE L1 -11 6160 5281 772 183 0 0 chr2 76663576 76663707 -176592876 - AluJo SINE Alu -171 131 1 4762 174 36 16 chr2 76663707 76664379 -176592204 - L1MB2 LINE L1 -890 5281 4624 7377 161 20 10 chr2 76665016 76665772 -176590811 - L1PB2 LINE L1 -1 6150 5403 2188 120 0 7 chr2 76665772 76666073 -176590510 - AluSg SINE Alu -11 299 1 7377 161 20 10 chr2 76666073 76666106 -176590477 - L1PB2 LINE L1 -748 5403 5372 1813 129 0 93 chr2 76666106 76666439 -176590144 - AluSq SINE Alu -11 302 1 7377 161 20 10 chr2 76666439 76667371 -176589212 - L1PB2 LINE L1 -779 5372 4390 231 103 0 0 chr2 76667371 76667410 -176589173 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 7377 161 20 10 chr2 76667410 76668109 -176588474 - L1PB2 LINE L1 -1761 4390 3700 2218 208 10 4 chr2 76668111 76668597 -176587986 + L1PB2 LINE L1 3202 3690 -2456 180 200 0 0 chr2 76669374 76669414 -176587169 + (CATATA)n Simple_repeat Simple_repeat 2 41 0 25 65 0 0 chr2 76669461 76669507 -176587076 + AT_rich Low_complexity Low_complexity 1 46 0 258 282 39 13 chr2 76670344 76670422 -176586161 + MER5A DNA MER1_type 82 161 -28 717 332 86 65 chr2 76670611 76671213 -176585370 + L3 LINE CR1 217 831 -746 282 274 74 0 chr2 76671282 76671377 -176585206 + MIR SINE MIR 39 140 -122 22 0 0 0 chr2 76671464 76671486 -176585097 + AT_rich Low_complexity Low_complexity 1 22 0 4268 197 59 26 chr2 76671632 76672279 -176584304 + L1MB8 LINE L1 4159 4783 -1395 2208 123 0 0 chr2 76672279 76672579 -176584004 + AluSg SINE Alu 1 300 -10 4268 197 59 26 chr2 76672579 76673861 -176582722 + L1MB8 LINE L1 4783 6146 -32 226 340 145 42 chr2 76674083 76674559 -176582024 + L3 LINE CR1 1046 1570 -7 3440 166 42 20 chr2 76674776 76675474 -176581109 + L1MB8 LINE L1 5455 6167 -11 189 348 122 22 chr2 76676979 76677209 -176579374 - L2 LINE L2 -2522 792 540 227 313 107 15 chr2 76677333 76677464 -176579119 + L2 LINE L2 2212 2354 -960 871 153 0 0 chr2 76677943 76678074 -176578509 + FLAM_A SINE Alu 1 131 -2 2306 77 20 7 chr2 76678076 76678374 -176578209 + AluSg SINE Alu 1 302 -8 381 295 73 51 chr2 76678570 76678804 -176577779 - L1M4 LINE L1 -3320 2826 2588 319 271 144 22 chr2 76679051 76679247 -176577336 + L1ME LINE L1 5481 5695 -426 1765 179 13 0 chr2 76680997 76681305 -176575278 + MER7A DNA MER2_type 3 312 -34 24 32 0 0 chr2 76681314 76681345 -176575238 + AT_rich Low_complexity Low_complexity 1 31 0 207 0 0 0 chr2 76681436 76681459 -176575124 + (TA)n Simple_repeat Simple_repeat 1 23 0 944 223 0 0 chr2 76681459 76681665 -176574918 - AluSg/x SINE Alu -1 311 106 216 0 0 0 chr2 76682354 76682378 -176574205 + (TCC)n Simple_repeat Simple_repeat 1 24 0 377 138 0 0 chr2 76682802 76682860 -176573723 + MER53 DNA DNA 1 58 -131 239 213 229 0 chr2 76683502 76683563 -176573020 + L1ME4a LINE L1 5511 5585 -536 2329 86 7 0 chr2 76683869 76684160 -176572423 + AluSq SINE Alu 2 294 -19 2156 105 34 7 chr2 76684161 76684457 -176572126 + AluSg SINE Alu 1 304 -6 1714 144 0 26 chr2 76684752 76685022 -176571561 + AluSx SINE Alu 43 305 -7 465 252 9 0 chr2 76685094 76685201 -176571382 - MIR SINE MIR -4 258 151 618 26 26 0 chr2 76685928 76686006 -176570577 - L1PA4 LINE L1 0 6155 6076 21 36 0 0 chr2 76686179 76686207 -176570376 + AT_rich Low_complexity Low_complexity 1 28 0 406 238 0 36 chr2 76686595 76686679 -176569904 + FRAM SINE Alu 75 155 -21 1923 146 50 41 chr2 76687282 76687644 -176568939 - MLT1A1 LTR MaLR 0 365 1 205 238 133 76 chr2 76688196 76688406 -176568177 + L2 LINE L2 1329 1550 -1764 406 322 88 26 chr2 76688600 76688951 -176567632 + L1ME4a LINE L1 5667 6039 -82 2788 196 22 0 chr2 76689109 76689644 -176566939 - L1MB5 LINE L1 -34 6140 5594 695 168 0 36 chr2 76689660 76689797 -176566786 - FLAM_C SINE Alu -1 132 1 392 151 2 0 chr2 76689798 76689924 -176566659 - L1MB5 LINE L1 -1400 4746 4645 2550 81 0 0 chr2 76689972 76690282 -176566301 - AluSg SINE Alu 0 310 1 1955 100 59 7 chr2 76691367 76691656 -176564927 + AluY SINE Alu 1 304 -7 2025 135 0 0 chr2 76692161 76692443 -176564140 - AluSx SINE Alu -30 282 1 4609 183 19 32 chr2 76692885 76694199 -176562384 - L1MB2 LINE L1 -14 6157 4855 2306 104 0 3 chr2 76694199 76694498 -176562085 + AluSx SINE Alu 1 298 -14 4609 183 19 32 chr2 76694498 76694617 -176561966 - L1MB2 LINE L1 -1316 4855 4736 684 220 0 0 chr2 76694646 76694778 -176561805 - FLAM_C SINE Alu -10 133 2 508 127 0 0 chr2 76694780 76694859 -176561724 - L1MB2 LINE L1 -1400 4746 4668 2017 115 0 0 chr2 76694926 76695196 -176561387 - AluSg SINE Alu -8 302 33 550 226 234 8 chr2 76695297 76695536 -176561047 + L2 LINE L2 3016 3308 -5 2441 68 0 29 chr2 76695769 76696080 -176560503 - AluY SINE Alu -9 302 1 2478 58 0 0 chr2 76696106 76696398 -176560185 - AluY SINE Alu -19 292 1 182 91 30 0 chr2 76697169 76697202 -176559381 + (TAGA)n Simple_repeat Simple_repeat 4 37 0 189 0 0 0 chr2 76697978 76697999 -176558584 + (TCC)n Simple_repeat Simple_repeat 1 21 0 429 169 79 11 chr2 76698423 76698512 -176558071 + MER53 DNA DNA 1 95 -94 1465 185 60 0 chr2 76698795 76699076 -176557507 + L1MB4 LINE L1 5882 6179 -1 360 201 19 19 chr2 76699568 76699722 -176556861 + CT-rich Low_complexity Low_complexity 2 155 0 450 0 0 0 chr2 76699723 76699773 -176556810 + (CA)n Simple_repeat Simple_repeat 2 51 0 7619 30 9 0 chr2 76700035 76701675 -176554908 - L1PA3 LINE L1 0 6155 4507 362 283 85 52 chr2 76703016 76703288 -176553295 + L2 LINE L2 3032 3312 -1 308 278 59 41 chr2 76703334 76703503 -176553080 + MER69A DNA AcHobo 2 173 -4 300 256 200 0 chr2 76703510 76703635 -176552948 + MIR SINE MIR 2 151 -111 416 191 0 92 chr2 76703820 76703951 -176552632 - L2 LINE L2 -1332 1982 1864 264 242 109 104 chr2 76704060 76704453 -176552130 - HAL1 LINE L1 -1322 1185 791 2926 46 0 0 chr2 76705546 76705894 -176550689 - L1PA6 LINE L1 -70 6084 5737 509 61 0 0 chr2 76705895 76705961 -176550622 + L1PA5 LINE L1 6085 6150 -4 237 273 15 15 chr2 76705965 76706031 -176550552 + LTR16C LTR ERVL 426 491 0 1179 195 8 27 chr2 76706507 76706763 -176549820 - L1ME1 LINE L1 -24 6142 5892 1303 197 0 4 chr2 76706956 76707184 -176549399 + AluJb SINE Alu 85 311 -1 316 302 57 52 chr2 76707353 76707565 -176549018 + MER89-int LTR ERV1 1607 1819 -4982 875 105 8 8 chr2 76708141 76708274 -176548309 + L1PB2 LINE L1 6012 6144 -7 25 0 0 0 chr2 76708274 76708299 -176548284 + AT_rich Low_complexity Low_complexity 1 25 0 349 314 43 54 chr2 76708539 76709014 -176547569 + MER89-int LTR ERV1 3305 4367 -4259 379 280 80 105 chr2 76709776 76710101 -176546482 + MER89-int LTR ERV1 3561 3877 -2924 1813 270 37 54 chr2 76710170 76710527 -176546056 + MER89-int LTR ERV1 2093 2455 -5082 249 33 0 0 chr2 76710527 76710557 -176546026 + (TA)n Simple_repeat Simple_repeat 2 31 0 1948 140 0 3 chr2 76710557 76710842 -176545741 - AluY SINE Alu -27 284 1 1813 270 37 54 chr2 76710842 76711877 -176544706 + MER89-int LTR ERV1 2453 6198 -1339 1939 158 7 3 chr2 76712174 76712478 -176544105 - AluSx SINE Alu -7 305 1 5228 199 91 32 chr2 76713209 76714102 -176542481 + Charlie1a DNA MER1_type 1 1005 -1756 2214 109 20 0 chr2 76714102 76714405 -176542178 + AluSq SINE Alu 1 309 -4 5228 199 91 32 chr2 76714405 76714885 -176541698 + Charlie1a DNA MER1_type 1005 1455 0 256 278 214 8 chr2 76715204 76715330 -176541253 - MIR3 SINE MIR -34 174 23 419 248 118 49 chr2 76715555 76715801 -176540782 - L1ME4a LINE L1 -33 6088 5826 890 149 7 20 chr2 76716160 76716340 -176540243 - AluSg/x SINE Alu 0 315 138 7080 211 35 18 chr2 76716444 76718823 -176537760 - L1ME1 LINE L1 -267 5917 3491 816 187 45 45 chr2 76718931 76719129 -176537454 - L1ME1 LINE L1 -288 5878 5681 2629 164 12 43 chr2 76719130 76719617 -176536966 + MER70A LTR ERVL 1 472 0 5042 178 48 23 chr2 76719617 76720226 -176536357 + MER70A-int LTR ERVL 1 644 -4379 1423 204 89 0 chr2 76720226 76720506 -176536077 + AluJb SINE Alu 1 305 -7 5042 178 48 23 chr2 76720506 76720859 -176535724 + MER70A-int LTR ERVL 644 987 -4036 * 8282 146 55 1 chr2 76720850 76722196 -176534387 + MER70-int LTR ERVL 2544 3961 -1062 1094 119 40 6 chr2 76722189 76722366 -176534217 + MER70-int LTR ERVL 4753 4935 -88 * 677 106 11 0 chr2 76722466 76722560 -176534023 - AluS SINE Alu -217 96 2 2361 97 3 0 chr2 76725178 76725486 -176531097 + AluSx SINE Alu 1 309 -3 30 27 0 0 chr2 76725579 76725616 -176530967 + AT_rich Low_complexity Low_complexity 1 37 0 829 160 8 0 chr2 76725668 76725799 -176530784 - FLAM_C SINE Alu 0 133 2 438 183 0 21 chr2 76725917 76726010 -176530573 - MIR SINE MIR -45 217 127 1726 211 71 19 chr2 76726828 76727306 -176529277 - MER67C LTR ERV1 -3 707 205 399 98 0 16 chr2 76727409 76727470 -176529113 + MER70A-int LTR ERVL 4964 5023 0 1181 166 0 0 chr2 76727477 76727652 -176528931 + MER70A LTR ERVL 1 175 -297 249 33 0 0 chr2 76727652 76727682 -176528901 + (TA)n Simple_repeat Simple_repeat 2 31 0 2274 101 3 3 chr2 76727697 76728003 -176528580 - AluSp SINE Alu -7 306 1 2014 169 82 5 chr2 76728073 76728464 -176528119 - MSTA LTR MaLR -3 425 5 685 133 59 22 chr2 76728464 76728593 -176527990 - MSTA-int LTR MaLR -8 1643 1510 2051 89 4 0 chr2 76728606 76728875 -176527708 + AluY SINE Alu 26 295 -16 184 283 167 8 chr2 76728897 76729017 -176527566 - MIR3 SINE MIR -40 168 30 560 269 144 11 chr2 76729798 76730062 -176526521 - L2 LINE L2 -579 2735 2437 255 224 103 64 chr2 76730181 76730337 -176526246 - L1ME4a LINE L1 -28 6093 5932 343 264 97 7 chr2 76730658 76730802 -176525781 - L1ME4a LINE L1 -353 5768 5612 1196 53 0 0 chr2 76731095 76731245 -176525338 - L1PA5 LINE L1 -1 6153 6004 2437 83 0 10 chr2 76731246 76731547 -176525036 - AluSp SINE Alu -15 298 1 1406 97 5 10 chr2 76732102 76732298 -176524285 + AluSc SINE Alu 102 296 -13 544 279 99 39 chr2 76732574 76732807 -176523776 + L1MC2 LINE L1 5536 5782 -2026 2216 95 0 13 chr2 76734184 76734490 -176522093 - AluSq SINE Alu -11 302 1 2407 215 130 12 chr2 76735112 76735759 -176520824 - MER20B DNA MER1_type -5 778 56 1873 153 14 0 chr2 76736078 76736365 -176520218 + AluJb SINE Alu 1 291 -21 569 109 33 11 chr2 76736370 76736462 -176520121 + L1MC2 LINE L1 6015 6108 -236 189 147 88 118 chr2 76736464 76736532 -176520051 - MIR SINE MIR -54 208 143 485 199 24 34 chr2 76736694 76736922 -176519661 + L1MC3 LINE L1 6098 6327 -1458 2388 70 3 3 chr2 76736922 76737222 -176519361 - AluY SINE Alu -11 300 1 485 199 24 34 chr2 76737222 76737243 -176519340 + L1MC3 LINE L1 6327 7785 0 459 155 0 0 chr2 76737379 76737450 -176519133 + FLAM SINE Alu 38 108 -35 848 113 14 35 chr2 76737470 76737611 -176518972 - AluY SINE Alu 0 311 174 466 327 0 31 chr2 76738148 76738371 -176518212 - MER66-int LTR ERV1 -5022 1654 1439 318 360 36 22 chr2 76741167 76741306 -176515277 + L2 LINE L2 3125 3265 -7 682 173 0 0 chr2 76741309 76741419 -176515164 + FLAM_C SINE Alu 2 111 -32 409 276 123 38 chr2 76741541 76741802 -176514781 + HAL1 LINE L1 1950 2232 -275 496 267 130 11 chr2 76741992 76742262 -176514321 + L1ME LINE L1 5004 5305 -841 1946 91 4 0 chr2 76742311 76742565 -176514018 + THE1B LTR MaLR 1 255 -109 1545 124 5 0 chr2 76742565 76742774 -176513809 + THE1B LTR MaLR 18 227 -137 436 141 0 0 chr2 76742772 76742836 -176513747 + THE1B LTR MaLR 365 428 0 * 439 290 68 14 chr2 76742837 76743044 -176513539 + L1ME LINE L1 5322 5539 -623 963 225 114 36 chr2 76743646 76743906 -176512677 - L1M4 LINE L1 -2502 3644 3406 2305 103 0 6 chr2 76743906 76744218 -176512365 - AluY SINE Alu -1 310 1 963 225 114 36 chr2 76744218 76744432 -176512151 - L1M4 LINE L1 -2740 3406 3133 480 319 1 34 chr2 76744736 76744994 -176511589 - MER66-int LTR ERV1 -5022 1654 1329 291 374 36 22 chr2 76747727 76747866 -176508717 + L2 LINE L2 3125 3265 -7 717 164 0 0 chr2 76747869 76747979 -176508604 + FLAM_C SINE Alu 2 111 -32 186 43 0 0 chr2 76747983 76748006 -176508577 + (T)n Simple_repeat Simple_repeat 1 23 0 418 273 117 45 chr2 76748112 76748376 -176508207 + HAL1 LINE L1 1950 2232 -275 708 252 112 4 chr2 76748569 76748827 -176507756 + L1ME3 LINE L1 5004 5289 -857 1853 155 11 3 chr2 76748894 76749415 -176507168 + THE1B LTR MaLR 1 428 0 432 286 68 41 chr2 76749416 76749636 -176506947 + L1ME3 LINE L1 5322 5547 -617 394 274 104 9 chr2 76749736 76749948 -176506635 + L1ME3 LINE L1 5720 5951 -211 206 128 26 0 chr2 76749994 76750033 -176506550 + (TAGA)n Simple_repeat Simple_repeat 2 41 0 534 167 17 17 chr2 76750291 76750465 -176506118 + CT-rich Low_complexity Low_complexity 2 175 0 339 25 0 0 chr2 76750465 76750505 -176506078 + (CA)n Simple_repeat Simple_repeat 1 40 0 825 228 10 0 chr2 76750822 76751015 -176505568 - L1MB5 LINE L1 -11 6163 5969 437 107 0 0 chr2 76751514 76751570 -176505013 - 5S rRNA rRNA -65 56 1 277 191 11 0 chr2 76751579 76751641 -176504942 - MER5A DNA MER1_type -123 66 4 310 310 28 21 chr2 76751735 76751880 -176504703 - L2 LINE L2 -284 2988 2843 2239 178 57 5 chr2 76751943 76752347 -176504236 + MSTB LTR MaLR 2 426 0 2711 164 11 4 chr2 76752347 76752805 -176503778 + MSTB-int LTR MaLR 1 461 -1190 2034 210 7 25 chr2 76752806 76753248 -176503335 + MER57B LTR ERV1 1 434 0 563 279 215 32 chr2 76753252 76753499 -176503084 + MER57B-int LTR ERV1 3 294 -7243 189 0 0 0 chr2 76753520 76753541 -176503042 + (T)n Simple_repeat Simple_repeat 1 21 0 1361 176 0 5 chr2 76754389 76754611 -176501972 + AluJb SINE Alu 85 305 -7 331 301 62 23 chr2 76754772 76754948 -176501635 + MER89-int LTR ERV1 1607 1789 -5012 874 105 8 8 chr2 76755560 76755693 -176500890 + L1PB2 LINE L1 6012 6144 -7 23 0 0 0 chr2 76755695 76755718 -176500865 + AT_rich Low_complexity Low_complexity 1 23 0 574 311 72 46 chr2 76755962 76756676 -176499907 + MER89-int LTR ERV1 2544 2981 -3820 296 323 16 43 chr2 76756835 76757021 -176499562 + MER89-int LTR ERV1 4091 4271 -3485 285 258 43 32 chr2 76757295 76757388 -176499195 + MER89-int LTR ERV1 3566 3659 -3142 374 161 0 0 chr2 76757878 76757934 -176498649 - 5S rRNA rRNA -65 56 1 2333 72 14 0 chr2 76757941 76758234 -176498349 - AluSp SINE Alu -16 297 1 248 207 12 0 chr2 76758248 76758308 -176498275 - MER5A DNA MER1_type -125 64 4 310 310 28 21 chr2 76758401 76758546 -176498037 - L2 LINE L2 -284 2988 2843 2152 174 76 5 chr2 76758609 76759006 -176497577 + MSTB LTR MaLR 2 426 0 2596 167 20 7 chr2 76759006 76759461 -176497122 + MSTB-int LTR MaLR 1 461 -1190 2095 204 9 25 chr2 76759462 76759903 -176496680 + MER57B LTR ERV1 1 434 0 502 260 89 48 chr2 76759907 76760151 -176496432 + MER57B-int LTR ERV1 3 294 -7243 189 0 0 0 chr2 76760172 76760193 -176496390 + (T)n Simple_repeat Simple_repeat 1 21 0 1324 256 91 72 chr2 76761782 76762406 -176494177 + L1MC4a LINE L1 5346 5981 -1827 235 360 12 0 chr2 76762714 76762800 -176493783 + CT-rich Low_complexity Low_complexity 1 87 0 604 269 48 0 chr2 76764996 76765163 -176491420 - MIR SINE MIR -81 181 7 2208 113 0 7 chr2 76765815 76766115 -176490468 + AluSx SINE Alu 1 298 -14 229 250 0 97 chr2 76766126 76766198 -176490385 + L1MC/D LINE L1 5589 5653 -2155 629 115 11 0 chr2 76766504 76766591 -176489992 - AluS SINE Alu -223 89 2 2549 337 62 53 chr2 76766601 76767428 -176489155 - HERV15 LTR ERV1 -2942 4180 3362 1985 145 30 3 chr2 76767428 76767732 -176488851 - AluSq SINE Alu -1 312 1 2549 337 62 53 chr2 76767732 76768431 -176488152 - HERV15 LTR ERV1 -3760 3362 2671 2449 55 7 3 chr2 76768431 76768723 -176487860 - AluY SINE Alu -18 293 1 2549 337 62 53 chr2 76768723 76768764 -176487819 - HERV15 LTR ERV1 -4451 2671 2632 8189 58 6 8 chr2 76768764 76769772 -176486811 - LTR13 LTR ERVK 0 1007 2 2549 337 62 53 chr2 76769772 76771430 -176485153 - HERV15 LTR ERV1 -4490 2632 953 397 305 49 38 chr2 76771645 76771909 -176484674 - HERV15 LTR ERV1 -5052 1627 538 329 43 21 0 chr2 76771969 76772016 -176484567 + (CA)n Simple_repeat Simple_repeat 2 49 0 276 225 85 54 chr2 76772420 76772549 -176484034 - LTR31 LTR ERV1 -8 611 479 2059 112 29 0 chr2 76773353 76773631 -176482952 + AluSx SINE Alu 1 286 -26 468 0 0 0 chr2 76773632 76773684 -176482899 + (TA)n Simple_repeat Simple_repeat 1 52 0 1971 236 162 32 chr2 76773769 76774280 -176482303 - HAL1 LINE L1 -43 2464 2021 2068 105 30 117 chr2 76774280 76774707 -176481876 - MLT1B LTR MaLR 0 390 1 1971 236 162 32 chr2 76774707 76774720 -176481863 - HAL1 LINE L1 -486 2021 2011 2228 127 0 3 chr2 76774720 76775027 -176481556 - AluSx SINE Alu 0 312 7 1971 236 162 32 chr2 76775027 76775469 -176481114 - HAL1 LINE L1 -496 2011 1371 915 278 10 10 chr2 76775473 76775775 -176480808 - AluSx SINE Alu 0 312 11 907 287 84 38 chr2 76780566 76781197 -176475386 - HERV15 LTR ERV1 -57 6619 5927 2269 88 0 7 chr2 76781197 76781492 -176475091 - AluY SINE Alu -17 294 2 2382 97 0 0 chr2 76781744 76782044 -176474539 + AluSx SINE Alu 1 300 -12 267 307 10 10 chr2 76782961 76783062 -176473521 - HERV15 LTR ERV1 -2529 6206 6106 753 300 40 38 chr2 76783282 76783756 -176472827 - HERV15 LTR ERV1 -1910 5846 5372 2141 128 21 40 chr2 76783895 76784269 -176472314 + THE1C LTR MaLR 1 367 -8 1270 145 0 0 chr2 76784943 76785122 -176471461 + AluSg/x SINE Alu 132 310 -2 271 287 87 17 chr2 76785129 76785244 -176471339 + HERVR LTR ERV1 4257 4379 -3013 2725 311 58 76 chr2 76785639 76785985 -176470598 + HERVR LTR ERV1 4702 5053 -2069 2055 135 10 6 chr2 76785985 76786296 -176470287 + AluJb SINE Alu 1 312 0 2725 311 58 76 chr2 76786296 76788345 -176468238 + HERVR LTR ERV1 5053 7054 -68 993 134 0 0 chr2 76789004 76789138 -176467445 + AluJo SINE Alu 1 134 -178 25 0 0 0 chr2 76789138 76789163 -176467420 + AT_rich Low_complexity Low_complexity 1 25 0 1900 147 3 16 chr2 76789356 76789663 -176466920 + AluJb SINE Alu 1 303 -9 62 36 0 0 chr2 76790777 76790860 -176465723 + AT_rich Low_complexity Low_complexity 1 83 0 312 298 56 31 chr2 76790860 76791021 -176465562 + MIR SINE MIR 66 230 -32 2278 110 3 0 chr2 76791322 76791623 -176464960 + AluSp SINE Alu 1 302 -11 212 274 68 14 chr2 76791916 76791989 -176464594 + L2 LINE L2 3196 3272 0 806 168 0 40 chr2 76792161 76792310 -176464273 - FLAM_C SINE Alu 0 143 1 491 286 0 30 chr2 76792355 76792523 -176464060 - MIR SINE MIR -62 200 38 2251 100 7 3 chr2 76792565 76792866 -176463717 + AluSx SINE Alu 1 302 -10 2789 195 24 29 chr2 76792906 76793424 -176463159 + MLT2B3 LTR ERVL 1 517 -37 510 61 0 0 chr2 76793424 76793490 -176463093 + (TCCA)n Simple_repeat Simple_repeat 2 67 0 2789 195 24 29 chr2 76793490 76793525 -176463058 + MLT2B3 LTR ERVL 517 551 -3 485 293 90 16 chr2 76793666 76793854 -176462729 - L3 LINE CR1 -550 1027 826 2419 88 0 0 chr2 76793908 76794204 -176462379 + AluY SINE Alu 1 296 -15 392 250 30 15 chr2 76795167 76795299 -176461284 + L1ME4a LINE L1 3712 3845 -2301 24 53 0 0 chr2 76795299 76795337 -176461246 + AT_rich Low_complexity Low_complexity 1 38 0 593 330 105 39 chr2 76795506 76796325 -176460258 + L2 LINE L2 2441 3312 -1 229 276 58 39 chr2 76796337 76796493 -176460090 + L1ME4a LINE L1 5573 5731 -390 2492 76 0 0 chr2 76796555 76796859 -176459724 + AluY SINE Alu 1 304 -7 227 195 115 62 chr2 76796913 76797026 -176459557 + L1ME4a LINE L1 5906 6024 -97 638 100 0 11 chr2 76797933 76798068 -176458515 + AluSq SINE Alu 2 175 -138 237 132 0 0 chr2 76798068 76798106 -176458477 + (A)n Simple_repeat Simple_repeat 1 38 0 865 75 0 0 chr2 76798114 76798220 -176458363 + AluSq/x SINE Alu 2 107 -206 1747 148 66 6 chr2 76798724 76799056 -176457527 - L1MB4 LINE L1 -37 6143 5792 1178 257 119 55 chr2 76799552 76799794 -176456789 + L1MC4a LINE L1 5333 5274 -906 2159 118 7 3 chr2 76799794 76800091 -176456492 - AluJb SINE Alu -14 298 1 1178 257 119 55 chr2 76800091 76800432 -176456151 + L1MC4a LINE L1 5273 5591 -589 192 200 0 0 chr2 76800764 76800804 -176455779 + CT-rich Low_complexity Low_complexity 2 41 0 2188 171 28 0 chr2 76801176 76801568 -176455015 + MER57A LTR ERV1 1 403 0 634 252 19 0 chr2 76802186 76802345 -176454238 + MIR SINE MIR 47 208 -54 252 273 13 0 chr2 76803071 76803148 -176453435 - MLT1K LTR MaLR -6 582 505 1455 188 75 9 chr2 76803730 76804065 -176452518 - MER4D LTR ERV1 0 903 547 318 233 19 39 chr2 76804066 76804169 -176452414 - MER4E LTR ERV1 -609 170 70 * 809 216 153 0 chr2 76804167 76804403 -176452180 - MER49 LTR ERV1 -635 288 17 21 0 0 0 chr2 76805454 76805475 -176451108 + AT_rich Low_complexity Low_complexity 1 21 0 37669 36 5 3 chr2 76805656 76810124 -176446459 + L1P LINE L1 2 4477 -1669 1990 135 7 3 chr2 76810313 76810643 -176445940 + AluSx SINE Alu 1 331 0 638 291 19 28 chr2 76811120 76811394 -176445189 + MER57-int LTR ERV1 6806 7001 -536 2016 216 14 16 chr2 76811538 76811973 -176444610 + MER57B LTR ERV1 1 434 0 6273 179 49 11 chr2 76811973 76812367 -176444216 + MSTB-int LTR MaLR 459 837 -814 2112 144 3 0 chr2 76812367 76812672 -176443911 - AluSx SINE Alu -6 306 1 6273 179 49 11 chr2 76812672 76813426 -176443157 + MSTB-int LTR MaLR 837 1650 -1 2199 181 44 5 chr2 76813427 76813813 -176442770 + MSTB LTR MaLR 1 401 -25 267 252 57 49 chr2 76813916 76814039 -176442544 + MLT1H LTR MaLR 5 128 -421 231 353 0 0 chr2 76814074 76814159 -176442424 + MLT1H LTR MaLR 210 294 -255 362 197 28 0 chr2 76814207 76814278 -176442305 + MLT1H LTR MaLR 413 485 -64 594 235 37 19 chr2 76815430 76815592 -176440991 + MIR SINE MIR 47 211 -51 477 0 0 0 chr2 76817377 76817430 -176439153 + (TG)n Simple_repeat Simple_repeat 1 53 0 193 227 91 11 chr2 76817436 76817524 -176439059 - L2 LINE L2 -620 2694 2600 533 278 41 6 chr2 76817524 76817693 -176438890 + MER91A DNA MER1_type 1 175 -21 239 220 17 0 chr2 76818515 76818574 -176438009 - L2 LINE L2 0 3272 3213 1318 193 73 29 chr2 76819363 76819705 -176436878 - MER4D LTR ERV1 0 903 547 385 241 0 19 chr2 76819706 76819814 -176436769 - MER4E LTR ERV1 -609 170 65 * 524 177 44 9 chr2 76819807 76819920 -176436663 - MER49 LTR ERV1 -634 289 173 1524 114 0 0 chr2 76819923 76820124 -176436459 - AluSg SINE Alu -109 201 1 384 176 66 11 chr2 76820900 76820991 -176435592 + MER67C LTR ERV1 27 122 -588 517 276 154 6 chr2 76821091 76821454 -176435129 - L1 LINE L1 -2634 4214 3798 5993 183 30 17 chr2 76821509 76822336 -176434247 - L1PA16 LINE L1 -9 6157 5342 1923 122 0 87 chr2 76822336 76822671 -176433912 - AluSx SINE Alu -6 306 1 5993 183 30 17 chr2 76822671 76824048 -176432535 - L1PA16 LINE L1 -824 5342 3905 285 297 27 9 chr2 76824122 76824233 -176432350 - L1 LINE L1 -6501 348 236 354 287 98 75 chr2 76825235 76825622 -176430961 - L1ME4a LINE L1 -1 6120 5725 40665 77 5 2 chr2 76825623 76831750 -176424833 - L1PA5 LINE L1 -1 6153 11 1255 276 67 53 chr2 76832296 76832923 -176423660 + L1MC4a LINE L1 5346 5981 -1827 260 349 12 0 chr2 76833231 76833317 -176423266 + CT-rich Low_complexity Low_complexity 1 87 0 203 200 0 0 chr2 76834897 76834932 -176421651 + T-rich Low_complexity Low_complexity 1 35 0 398 242 325 10 chr2 76835452 76835646 -176420937 - MIR SINE MIR -1 261 7 2117 116 0 0 chr2 76836298 76836590 -176419993 + AluSx SINE Alu 1 292 -20 25 0 0 0 chr2 76836591 76836616 -176419967 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr2 76836718 76836739 -176419844 + AT_rich Low_complexity Low_complexity 1 21 0 801 248 0 0 chr2 76836974 76837131 -176419452 + FRAM SINE Alu 4 160 -16 21 0 0 0 chr2 76837131 76837152 -176419431 + AT_rich Low_complexity Low_complexity 1 21 0 2658 203 122 22 chr2 76837398 76838219 -176418364 + Charlie1 DNA MER1_type 1 2214 -547 2013 123 0 0 chr2 76838321 76838613 -176417970 - AluY SINE Alu -19 292 1 1407 269 39 71 chr2 76838613 76839642 -176416941 + MER57B-int LTR ERV1 2082 6195 -1342 1926 142 7 3 chr2 76839944 76840254 -176416329 - AluSx SINE Alu -1 311 1 1936 149 3 0 chr2 76840968 76841276 -176415307 + AluSx SINE Alu 1 309 -3 592 287 37 33 chr2 76841747 76842025 -176414558 + MER57B-int LTR ERV1 6806 7054 -483 2118 96 10 10 chr2 76842038 76842339 -176414244 + AluY SINE Alu 1 301 -10 444 178 29 23 chr2 76842370 76842478 -176414105 + MER57B-int LTR ERV1 7026 7537 0 2092 211 9 16 chr2 76842478 76842915 -176413668 + MER57B LTR ERV1 1 434 0 6292 184 46 11 chr2 76842917 76843310 -176413273 + MSTB-int LTR MaLR 461 839 -812 1746 167 10 0 chr2 76843310 76843609 -176412974 - AluSx SINE Alu -10 302 1 6292 184 46 11 chr2 76843609 76844365 -176412218 + MSTB-int LTR MaLR 839 1650 -1 2145 188 44 5 chr2 76844368 76844752 -176411831 + MSTB LTR MaLR 3 401 -25 228 291 77 17 chr2 76844855 76844972 -176411611 + MLT1H LTR MaLR 5 128 -421 358 231 26 0 chr2 76845140 76845218 -176411365 + MLT1H LTR MaLR 413 492 -57 302 264 13 119 chr2 76845288 76845447 -176411136 + MLT1J2 LTR MaLR 309 450 0 681 269 16 16 chr2 76846348 76846530 -176410053 + MIR SINE MIR 34 215 -47 189 0 0 0 chr2 76848328 76848349 -176408234 + (TG)n Simple_repeat Simple_repeat 1 21 0 238 237 86 11 chr2 76848356 76848449 -176408134 - L2 LINE L2 -615 2699 2600 598 289 17 6 chr2 76848449 76848622 -176407961 + MER91A DNA MER1_type 1 175 -21 256 254 17 0 chr2 76849442 76849501 -176407082 - L2 LINE L2 0 3272 3213 1606 42 55 5 chr2 76849636 76849853 -176406730 - L1P LINE L1 -1683 4463 4236 * 23468 73 6 1 chr2 76849850 76852856 -176403727 - L1P LINE L1 -3114 3032 11 182 339 28 55 chr2 76853104 76853213 -176403370 + L2 LINE L2 1839 1944 -1370 1754 171 50 41 chr2 76853270 76853632 -176402951 + MLT1A1 LTR MaLR 1 365 0 439 333 91 38 chr2 76854047 76854239 -176402344 + L1ME4a LINE L1 5394 5574 -547 1206 213 17 50 chr2 76854239 76854540 -176402043 - AluJo SINE Alu -21 291 1 439 333 91 38 chr2 76854540 76854960 -176401623 + L1ME4a LINE L1 5574 6039 -82 3325 173 18 0 chr2 76855115 76855712 -176400871 - L1MB5 LINE L1 -34 6140 5533 487 293 72 40 chr2 76855785 76856007 -176400576 - MIR SINE MIR -14 248 20 2016 95 24 3 chr2 76856743 76857038 -176399545 + AluY SINE Alu 1 301 -10 2147 101 0 0 chr2 76857810 76858116 -176398467 + AluY SINE Alu 1 306 -5 21 36 0 0 chr2 76858267 76858295 -176398288 + AT_rich Low_complexity Low_complexity 1 28 0 349 391 17 6 chr2 76858833 76859007 -176397576 + MIR3 SINE MIR 16 191 -17 370 106 0 0 chr2 76859214 76859261 -176397322 + Alu SINE Alu 2 48 -254 1183 181 40 40 chr2 76859344 76859620 -176396963 + AluJo SINE Alu 5 280 -32 261 0 0 0 chr2 76859620 76859649 -176396934 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 28 48 0 0 chr2 76859832 76859874 -176396709 + AT_rich Low_complexity Low_complexity 1 42 0 2153 103 3 0 chr2 76860097 76860398 -176396185 + AluSp SINE Alu 1 302 -11 1829 128 0 0 chr2 76860426 76860736 -176395847 + AluSx SINE Alu 1 310 0 1821 135 7 0 chr2 76861177 76861459 -176395124 + AluSq SINE Alu 1 284 -29 2000 96 24 3 chr2 76861641 76861934 -176394649 + AluY SINE Alu 1 299 -12 2113 95 3 10 chr2 76862710 76863015 -176393568 + AluY SINE Alu 1 303 -8 200 262 33 0 chr2 76866237 76866298 -176390285 + (CAGCC)n Simple_repeat Simple_repeat 5 67 0 2099 99 0 31 chr2 76866886 76867208 -176389375 + AluSx SINE Alu 1 312 0 2120 117 0 0 chr2 76869545 76869845 -176386738 - AluSx SINE Alu -12 300 1 372 113 70 14 chr2 76869866 76870008 -176386575 + (TA)n Simple_repeat Simple_repeat 2 151 0 352 196 21 72 chr2 76870009 76870106 -176386477 + L1MCa LINE L1 1981 2072 -4354 333 216 49 59 chr2 76870059 76870161 -176386422 - L1MC4 LINE L1 -1333 6709 6609 * 320 189 74 74 chr2 76870173 76870268 -176386315 + L1MC4 LINE L1 6609 6703 -1339 300 290 70 0 chr2 76870195 76870295 -176386288 - L1MC4 LINE L1 -1323 6719 6613 * 2152 87 14 0 chr2 76870316 76870605 -176385978 - AluSp SINE Alu -20 293 1 34 24 0 0 chr2 76870830 76870871 -176385712 + AT_rich Low_complexity Low_complexity 1 41 0 1330 186 36 33 chr2 76871046 76871347 -176385236 - AluJo SINE Alu -6 306 5 379 85 0 0 chr2 76871430 76871477 -176385106 - Alu SINE Alu -252 48 2 387 374 23 11 chr2 76871684 76871858 -176384725 - MIR3 SINE MIR -17 191 16 939 151 0 7 chr2 76872272 76872424 -176384159 + AluSq/x SINE Alu 1 151 -162 432 127 0 0 chr2 76872438 76872501 -176384082 + Alu SINE Alu 238 300 -10 188 317 171 24 chr2 76872739 76872903 -176383680 + MIR3 SINE MIR 18 205 -3 494 206 23 97 chr2 76873623 76873640 -176382943 + L1ME LINE L1 5579 5596 -525 2085 112 0 0 chr2 76873640 76873935 -176382648 - AluSx SINE Alu -13 299 5 494 206 23 97 chr2 76873935 76874133 -176382450 + L1ME LINE L1 5596 5776 -345 354 275 6 16 chr2 76874247 76874429 -176382154 + C-rich Low_complexity Low_complexity 1 180 0 363 226 13 44 chr2 76874443 76874768 -176381815 + CT-rich Low_complexity Low_complexity 1 314 0 2026 181 40 35 chr2 76874982 76875053 -176381530 - L1MB7 LINE L1 0 6184 6115 2058 101 30 0 chr2 76875053 76875351 -176381232 + AluSx SINE Alu 1 307 -5 2026 181 40 35 chr2 76875351 76875732 -176380851 - L1MB7 LINE L1 -69 6115 5730 198 156 0 0 chr2 76875741 76875773 -176380810 - L2 LINE L2 -17 3296 3265 344 246 66 66 chr2 76875786 76875908 -176380675 - MIR SINE MIR -110 152 31 1828 130 6 46 chr2 76876305 76876480 -176380103 - AluSx SINE Alu -2 310 152 2044 98 24 0 chr2 76876480 76876775 -176379808 - AluSp SINE Alu -11 302 1 1828 130 6 46 chr2 76876775 76876922 -176379661 - AluSx SINE Alu -160 152 1 1161 89 42 26 chr2 76877040 76877231 -176379352 - L1MB4 LINE L1 -1 6179 5986 382 231 8 123 chr2 76878338 76878468 -176378115 + L2 LINE L2 2337 2451 -863 241 176 98 0 chr2 76878468 76878519 -176378064 + MLT1D LTR MaLR 450 505 0 1545 241 103 11 chr2 76878558 76878927 -176377656 - MER119 DNA MER1_type -164 419 17 894 186 6 19 chr2 76878927 76879088 -176377495 - FRAM SINE Alu -7 159 1 700 253 32 48 chr2 76879110 76879296 -176377287 + L2 LINE L2 2626 2808 -506 981 201 0 5 chr2 76879302 76879486 -176377097 - MER58A DNA MER1_type 0 224 42 1070 250 104 77 chr2 76879522 76879974 -176376609 + L2 LINE L2 2848 3311 -2 2096 129 3 0 chr2 76880927 76881236 -176375347 - AluSg SINE Alu 0 310 1 186 375 11 0 chr2 76881238 76881326 -176375257 + L2 LINE L2 3224 3312 -1 1043 253 136 30 chr2 76881509 76882076 -176374507 - L2 LINE L2 -7 3306 2683 2081 105 14 7 chr2 76882076 76882370 -176374213 + AluSx SINE Alu 1 296 -16 1043 253 136 30 chr2 76882370 76882416 -176374167 - L2 LINE L2 -630 2683 2643 836 172 0 0 chr2 76882549 76882683 -176373900 - FAM SINE Alu 0 49 1 212 0 36 0 chr2 76882687 76882715 -176373868 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 871 164 0 0 chr2 76882719 76882859 -176373724 - FRAM SINE Alu -35 141 2 477 205 0 0 chr2 76883749 76883827 -176372756 + L2 LINE L2 3230 3307 -6 855 146 6 43 chr2 76884648 76884812 -176371771 + FRAM SINE Alu 2 159 -17 21 0 0 0 chr2 76888042 76888063 -176368520 + AT_rich Low_complexity Low_complexity 1 21 0 282 56 0 0 chr2 76888393 76888429 -176368154 + (TA)n Simple_repeat Simple_repeat 2 37 0 2258 95 7 26 chr2 76888481 76888785 -176367798 + AluSx SINE Alu 1 298 -14 1102 184 42 9 chr2 76888936 76889148 -176367435 - MER20 DNA MER1_type 0 219 1 690 257 111 54 chr2 76889255 76889605 -176366978 - MER57B LTR ERV1 0 434 65 1342 308 86 37 chr2 76890024 76890173 -176366410 - L2 LINE L2 -4 3309 3169 2638 160 16 9 chr2 76890173 76890237 -176366346 - Tigger2a DNA MER2_type -2274 434 372 2345 110 3 0 chr2 76890237 76890545 -176366038 + AluSx SINE Alu 1 309 -3 369 0 0 0 chr2 76890545 76890586 -176365997 + (TA)n Simple_repeat Simple_repeat 1 41 0 2638 160 16 9 chr2 76890586 76890951 -176365632 - Tigger2a DNA MER2_type -2335 373 1 1342 308 86 37 chr2 76890951 76891367 -176365216 - L2 LINE L2 -144 3169 2775 738 106 0 98 chr2 76891367 76891390 -176365193 - FLAM_C SINE Alu -179 123 99 1995 96 71 0 chr2 76891390 76891670 -176364913 + AluSx SINE Alu 1 300 -12 738 106 0 98 chr2 76891670 76891778 -176364805 - FLAM_C SINE Alu -203 99 5 1342 308 86 37 chr2 76891778 76892275 -176364308 - L2 LINE L2 -538 2775 2185 2030 159 42 83 chr2 76893266 76893602 -176362981 + Charlie4a DNA MER1_type 2 310 -1651 2661 52 0 0 chr2 76893602 76893910 -176362673 + AluY SINE Alu 1 308 -3 2030 159 42 83 chr2 76893910 76894102 -176362481 + Charlie4a DNA MER1_type 310 508 0 603 266 141 30 chr2 76894120 76894454 -176362129 - L2 LINE L2 -1153 2161 1791 1036 197 43 14 chr2 76894462 76894670 -176361913 - MER58A DNA MER1_type -8 216 3 441 280 58 25 chr2 76894671 76894914 -176361669 - L2 LINE L2 -1516 1798 1548 622 241 188 44 chr2 76896190 76896531 -176360052 + L2 LINE L2 2921 3310 -3 246 216 11 54 chr2 76896730 76896915 -176359668 + (GTGTG)n Simple_repeat Simple_repeat 4 180 0 * 280 147 45 57 chr2 76896813 76897000 -176359583 + (TTGTG)n Simple_repeat Simple_repeat 1 184 0 501 208 54 152 chr2 76897155 76897343 -176359240 - L1ME LINE L1 -352 5769 5564 2252 110 0 7 chr2 76897343 76897653 -176358930 + AluSx SINE Alu 5 312 0 501 208 54 152 chr2 76897653 76898003 -176358580 - L1ME LINE L1 -557 5564 5300 734 204 39 74 chr2 76898287 76898398 -176358185 - MIR SINE MIR -28 234 134 1094 107 124 0 chr2 76898398 76898567 -176358016 - MER30B DNA MER1_type 0 190 1 734 204 39 74 chr2 76898567 76898686 -176357897 - MIR SINE MIR -128 134 12 246 280 54 21 chr2 76898880 76898973 -176357610 - L1MC4a LINE L1 -1660 6148 6053 3489 143 47 5 chr2 76899040 76899621 -176356962 + MER6A DNA MER2_type 1 605 0 348 300 17 25 chr2 76899654 76899774 -176356809 - L2 LINE L2 -5 3267 3149 1225 145 0 35 chr2 76900056 76900256 -176356327 - AluJo SINE Alu 0 312 120 276 130 0 0 chr2 76900266 76900312 -176356271 + (TA)n Simple_repeat Simple_repeat 1 46 0 884 127 0 0 chr2 76900328 76900446 -176356137 - AluJo SINE Alu -194 118 1 335 297 89 0 chr2 76900851 76900952 -176355631 + MIR SINE MIR 3 112 -150 2276 101 10 0 chr2 76902511 76902808 -176353775 - AluSx SINE Alu -12 300 1 1812 122 19 81 chr2 76903196 76903516 -176353067 + AluJb SINE Alu 1 300 -12 2168 141 0 0 chr2 76903676 76903975 -176352608 + AluJb SINE Alu 1 299 -13 1092 142 35 6 chr2 76905388 76905557 -176351026 - MSTD LTR MaLR 0 396 223 649 164 9 0 chr2 76905561 76905671 -176350912 - MSTD LTR MaLR -285 111 1 1405 41 0 6 chr2 76905778 76905950 -176350633 - L1MA1 LINE L1 0 6302 6132 201 275 12 12 chr2 76907040 76907120 -176349463 - MER5B DNA MER1_type -98 80 1 31 44 0 0 chr2 76907575 76907620 -176348963 + AT_rich Low_complexity Low_complexity 1 45 0 2459 93 0 0 chr2 76908514 76908816 -176347767 - AluSq SINE Alu -11 302 1 229 350 144 23 chr2 76908889 76909409 -176347174 - L2 LINE L2 -546 2768 2186 1214 99 16 136 chr2 76909554 76909797 -176346786 - AluSg/x SINE Alu -10 302 89 306 0 0 0 chr2 76909797 76909831 -176346752 + (TG)n Simple_repeat Simple_repeat 1 34 0 650 78 223 0 chr2 76909831 76909934 -176346649 - AluSg SINE Alu -183 127 2 217 307 34 0 chr2 76910239 76910327 -176346256 - L2 LINE L2 -1523 1791 1701 537 224 70 108 chr2 76910361 76910420 -176346163 - L1ME3A LINE L1 -9 6161 6101 2227 112 0 0 chr2 76910420 76910714 -176345869 + AluSg SINE Alu 1 294 -16 537 224 70 108 chr2 76910714 76910998 -176345585 - L1ME3A LINE L1 -69 6101 5831 1073 185 12 0 chr2 76911445 76911618 -176344965 - FAM SINE Alu 0 175 1 1895 137 3 36 chr2 76911684 76911991 -176344592 + AluJb SINE Alu 1 297 -15 213 342 0 45 chr2 76912319 76912430 -176344153 - L2 LINE L2 -1504 1810 1705 244 289 148 8 chr2 76912738 76912866 -176343717 + MER5B DNA MER1_type 3 148 -30 2128 96 0 68 chr2 76914964 76915286 -176341297 - AluY SINE Alu -11 300 1 911 147 0 7 chr2 76915286 76915422 -176341161 - AluSq/x SINE Alu -177 135 1 1185 110 119 23 chr2 76915434 76915653 -176340930 - L1MA8 LINE L1 0 6291 6052 1800 146 37 12 chr2 76915863 76916191 -176340392 - MER44D DNA MER2_type -1 608 3 240 161 0 0 chr2 76916665 76916727 -176339856 + A-rich Low_complexity Low_complexity 1 62 0 633 273 99 5 chr2 76917290 76917484 -176339099 + MIR SINE MIR 34 241 -21 542 334 140 3 chr2 76917774 76918082 -176338501 + L3 LINE CR1 1128 1477 -100 22 0 0 0 chr2 76918240 76918262 -176338321 + AT_rich Low_complexity Low_complexity 1 22 0 1520 132 4 40 chr2 76918493 76918744 -176337839 - AluSc SINE Alu -3 306 65 2146 128 3 0 chr2 76918876 76919174 -176337409 + AluSx SINE Alu 1 299 -13 299 206 41 21 chr2 76919546 76919643 -176336940 - L1MC4 LINE L1 -40 8002 7785 209 391 19 14 chr2 76920772 76920987 -176335596 + L2 LINE L2 2543 2758 -556 509 251 22 56 chr2 76921033 76921212 -176335371 + MER5B DNA MER1_type 6 178 0 194 174 116 72 chr2 76922613 76922682 -176333901 + MIR SINE MIR 95 166 -96 267 253 169 12 chr2 76923947 76924113 -176332470 + L2 LINE L2 3040 3231 -82 2191 97 28 0 chr2 76924288 76924577 -176332006 + AluSp SINE Alu 1 297 -16 267 294 61 14 chr2 76924648 76924862 -176331721 + L1M4 LINE L1 2926 3149 -2997 2429 84 3 0 chr2 76924863 76925161 -176331422 + AluSp SINE Alu 1 299 -14 185 261 29 14 chr2 76925354 76925423 -176331160 - MIR SINE MIR -106 102 33 540 299 110 59 chr2 76925445 76925622 -176330961 + L1M4 LINE L1 3805 3972 -2174 1762 159 34 10 chr2 76925622 76925918 -176330665 + AluJb SINE Alu 1 303 -9 540 299 110 59 chr2 76925918 76926622 -176329961 + L1M4 LINE L1 3972 4731 -1415 975 40 8 0 chr2 76926632 76926756 -176329827 + L1PA4 LINE L1 6028 6152 -3 26 0 0 0 chr2 76926757 76926783 -176329800 + AT_rich Low_complexity Low_complexity 1 26 0 443 233 44 39 chr2 76926961 76927141 -176329442 + L1ME4a LINE L1 5940 6120 -1 781 154 0 8 chr2 76927960 76928083 -176328500 - FLAM_C SINE Alu -16 127 6 948 296 130 41 chr2 76928382 76928605 -176327978 - MLT1K LTR MaLR -61 527 325 2208 108 0 17 chr2 76928605 76928901 -176327682 - AluSx SINE Alu -21 291 1 948 296 130 41 chr2 76928901 76929160 -176327423 - MLT1K LTR MaLR -263 325 2 242 306 122 0 chr2 76929271 76929369 -176327214 - L2 LINE L2 -2 3270 3161 1870 158 3 7 chr2 76930553 76930845 -176325738 - AluJo SINE Alu -21 291 1 180 0 0 0 chr2 76930848 76930868 -176325715 + (T)n Simple_repeat Simple_repeat 1 20 0 2412 78 3 0 chr2 76931764 76932060 -176324523 + AluSg SINE Alu 1 297 -13 284 308 113 16 chr2 76932390 76932532 -176324051 + MIR SINE MIR 18 183 -79 2165 116 7 7 chr2 76932532 76932833 -176323750 + AluSx SINE Alu 1 301 -11 284 308 113 16 chr2 76932833 76932875 -176323708 + MIR SINE MIR 183 220 -42 1953 156 0 3 chr2 76932999 76933300 -176323283 + AluJb SINE Alu 1 300 -12 961 158 107 0 chr2 76933617 76933794 -176322789 - Tigger1 DNA MER2_type -10 2408 2213 6051 70 13 0 chr2 76934658 76935438 -176321145 - L1PA8 LINE L1 0 6172 5383 2110 118 4 0 chr2 76935691 76935995 -176320588 + AluSx SINE Alu 1 305 0 196 42 0 0 chr2 76935971 76936056 -176320527 + (CAA)n Simple_repeat Simple_repeat 1 85 0 732 221 93 121 chr2 76936115 76936262 -176320321 - L1M4 LINE L1 -3526 2620 2470 186 189 0 0 chr2 76936262 76936299 -176320284 + (CATA)n Simple_repeat Simple_repeat 3 39 0 732 221 93 121 chr2 76936299 76936577 -176320006 - L1M4 LINE L1 -3676 2470 2172 * 6005 119 5 73 chr2 76936570 76937620 -176318963 - L1PA13 LINE L1 -2 6161 5041 2057 112 0 0 chr2 76937620 76937906 -176318677 + AluSq SINE Alu 24 309 -4 6005 119 5 73 chr2 76937906 76938167 -176318416 - L1PA13 LINE L1 -1122 5041 4939 267 128 0 0 chr2 76938167 76938206 -176318377 + MLT2C1 LTR ERVL 28 66 -331 6005 119 5 73 chr2 76938206 76938355 -176318228 - L1PA13 LINE L1 -1224 4939 4781 183 162 0 0 chr2 76938356 76938393 -176318190 + (TA)n Simple_repeat Simple_repeat 1 37 0 1892 197 52 5 chr2 76938393 76938760 -176317823 - MLT2D LTR ERVL -40 480 1 1648 142 17 40 chr2 76939187 76939489 -176317094 + AluJb SINE Alu 1 295 -17 2320 87 0 0 chr2 76939939 76940238 -176316345 - AluSq SINE Alu -14 299 1 1021 228 54 51 chr2 76940317 76940651 -176315932 + L1MA9 LINE L1 5945 6279 -33 228 200 0 50 chr2 76940663 76940723 -176315860 + L1ME3 LINE L1 6106 6162 0 353 203 0 0 chr2 76940794 76940863 -176315720 - LTR30 LTR ERV1 -102 620 552 456 266 114 52 chr2 76940966 76941369 -176315214 + L1MC/D LINE L1 5293 5720 -2088 661 179 33 98 chr2 76941533 76941717 -176314866 - L2 LINE L2 -3 3310 3139 1939 157 0 0 chr2 76941743 76942055 -176314528 - AluJo SINE Alu 0 312 1 4757 142 27 20 chr2 76942365 76942557 -176314026 + L1MC1 LINE L1 5504 5693 -640 2042 117 3 0 chr2 76942557 76942847 -176313736 - AluSx SINE Alu -21 291 1 4757 142 27 20 chr2 76942847 76943470 -176313113 + L1MC1 LINE L1 5693 6325 -8 2173 112 0 0 chr2 76943470 76943764 -176312819 + AluSc SINE Alu 1 294 -15 3175 168 33 56 chr2 76943813 76944210 -176312373 + L1MB2 LINE L1 5453 5858 -313 1462 155 7 57 chr2 76944210 76944507 -176312076 + AluJo SINE Alu 13 294 -18 3175 168 33 56 chr2 76944507 76944766 -176311817 + L1MB2 LINE L1 5858 6094 -77 2134 98 0 0 chr2 76944766 76945080 -176311503 + AluSq SINE Alu 2 315 0 3175 168 33 56 chr2 76945080 76945154 -176311429 + L1MB2 LINE L1 6094 6168 -3 296 251 34 74 chr2 76945271 76945446 -176311137 + L1MC4a LINE L1 5191 5358 -788 2120 117 0 10 chr2 76945473 76945782 -176310801 + AluSx SINE Alu 1 306 -6 1682 134 24 31 chr2 76945844 76946135 -176310448 + AluJb SINE Alu 1 289 -23 888 278 92 67 chr2 76946494 76947092 -176309491 + L1MC4a LINE L1 5508 6120 -1 546 216 43 50 chr2 76948037 76948176 -176308407 - MER5A DNA MER1_type -51 138 1 414 334 86 34 chr2 76948176 76948676 -176307907 - L2 LINE L2 -635 2679 2154 575 174 0 0 chr2 76948684 76948770 -176307813 + AluJ/FLAM SINE Alu 1 86 -226 1917 105 62 0 chr2 76948815 76949091 -176307492 + AluSg SINE Alu 3 295 -15 322 284 83 28 chr2 76950482 76950591 -176305992 - MIR3 SINE MIR -10 198 84 439 193 88 44 chr2 76950791 76950905 -176305678 + MIR SINE MIR 96 214 -48 829 141 86 18 chr2 76950932 76951095 -176305488 - MER5A DNA MER1_type -5 184 11 464 265 175 43 chr2 76951314 76951548 -176305035 - L2 LINE L2 -2 3270 3006 245 304 216 11 chr2 76951630 76951811 -176304772 - L2 LINE L2 -449 2865 2648 1348 182 35 0 chr2 76952656 76952880 -176303703 - MER58B DNA MER1_type -2109 311 75 1296 157 31 72 chr2 76952880 76953199 -176303384 + AluJo SINE Alu 1 306 -6 1348 182 35 0 chr2 76953199 76953232 -176303351 - MER58B DNA MER1_type -2345 75 45 278 225 32 0 chr2 76953289 76953360 -176303223 - MIR SINE MIR -65 143 99 214 222 63 95 chr2 76954441 76954467 -176302116 - L2 LINE L2 -6 3307 3282 1014 211 87 62 chr2 76954467 76954823 -176301760 - MLT1A1 LTR MaLR 0 365 1 214 222 63 95 chr2 76954823 76954859 -176301724 - L2 LINE L2 -31 3282 3247 324 237 43 0 chr2 76955386 76955479 -176301104 - L1ME LINE L1 -531 5590 5494 2393 65 3 0 chr2 76955619 76955928 -176300655 - AluY SINE Alu -1 310 1 1495 162 36 69 chr2 76955930 76956264 -176300319 - Charlie4a DNA MER1_type -184 324 2 1614 310 71 38 chr2 76957247 76957744 -176298839 + L2 LINE L2 2185 2720 -593 745 106 0 98 chr2 76957744 76957852 -176298731 + AluJo/FLAM SINE Alu 5 99 -203 1880 96 71 0 chr2 76957852 76958132 -176298451 - AluSx SINE Alu -12 300 1 745 106 0 98 chr2 76958132 76958155 -176298428 + AluJo/FLAM SINE Alu 99 123 -179 1614 310 71 38 chr2 76958155 76958510 -176298073 + L2 LINE L2 2720 3062 -251 2374 140 11 3 chr2 76958571 76958935 -176297648 + Tigger2a DNA MER2_type 1 367 -67 228 241 36 48 chr2 76958935 76959018 -176297565 + L1MD3 LINE L1 6612 6693 -1302 1025 54 15 0 chr2 76959197 76959327 -176297256 - AluY SINE Alu -179 132 1 654 277 47 83 chr2 76959333 76959400 -176297183 - L3 LINE CR1 -716 861 793 1440 168 35 25 chr2 76959400 76959685 -176296898 + AluJb SINE Alu 1 288 -24 654 277 47 83 chr2 76959685 76959917 -176296666 - L3 LINE CR1 -784 793 573 256 156 0 31 chr2 76960585 76960649 -176295934 + GA-rich Low_complexity Low_complexity 2 63 0 21 0 0 0 chr2 76960943 76960964 -176295619 + AT_rich Low_complexity Low_complexity 1 21 0 1354 143 12 66 chr2 76961057 76961331 -176295252 - MLT1B LTR MaLR -134 256 3 615 39 0 0 chr2 76961749 76961827 -176294756 + (TG)n Simple_repeat Simple_repeat 1 78 0 402 39 0 0 chr2 76962234 76962286 -176294297 + (TG)n Simple_repeat Simple_repeat 2 53 0 612 321 29 29 chr2 76962785 76963031 -176293552 + L2 LINE L2 2513 2758 -556 322 248 93 54 chr2 76963696 76963825 -176292758 + MIR SINE MIR 117 250 -12 2324 97 0 0 chr2 76963875 76964185 -176292398 + AluSg SINE Alu 1 310 0 1651 154 49 14 chr2 76964204 76964490 -176292093 + AluJb SINE Alu 15 310 -2 1583 131 62 15 chr2 76964603 76964863 -176291720 + AluSg SINE Alu 1 272 -38 36 82 0 0 chr2 76964865 76964950 -176291633 + AT_rich Low_complexity Low_complexity 1 85 0 351 0 0 0 chr2 76964953 76964992 -176291591 + (TG)n Simple_repeat Simple_repeat 2 40 0 342 0 0 0 chr2 76964991 76965029 -176291554 + (TA)n Simple_repeat Simple_repeat 1 38 0 * 314 263 179 68 chr2 76965047 76965298 -176291285 + L1ME4a LINE L1 4531 4809 -1337 1046 304 118 52 chr2 76965637 76966366 -176290217 + L1ME4a LINE L1 5264 6043 -78 2127 63 11 3 chr2 76966383 76966704 -176289879 + AluY SINE Alu 1 323 0 1512 194 11 0 chr2 76966706 76966989 -176289594 - AluJo SINE Alu -26 286 1 208 286 0 0 chr2 76967071 76967120 -176289463 - MER5B DNA MER1_type -51 127 79 232 259 107 36 chr2 76967414 76967526 -176289057 + L2 LINE L2 3134 3253 -19 1349 128 5 5 chr2 76967697 76967908 -176288675 - AluJo SINE Alu -15 297 87 999 174 153 0 chr2 76967911 76968101 -176288482 + MER20 DNA MER1_type 1 219 0 615 273 63 44 chr2 76968260 76968663 -176287920 - LTR33 LTR ERVL -80 441 1 247 283 17 92 chr2 76969082 76969202 -176287381 - L2 LINE L2 -11 3261 3151 182 250 91 0 chr2 76969366 76969410 -176287173 - L3b LINE CR1 -247 1336 1289 3080 153 8 54 chr2 76969678 76970144 -176286439 - Tigger3b DNA MER2_type -1797 1231 796 2135 101 0 0 chr2 76970144 76970432 -176286151 + AluSx SINE Alu 1 288 -24 3080 153 8 54 chr2 76970432 76970553 -176286030 - Tigger3b DNA MER2_type -2232 796 671 1307 126 7 100 chr2 76970696 76970846 -176285737 - Tigger3b DNA MER2_type -2113 915 799 1984 98 11 3 chr2 76970846 76971132 -176285451 + AluSx SINE Alu 1 288 -24 1307 126 7 100 chr2 76971132 76971251 -176285332 - Tigger3b DNA MER2_type -2229 799 671 930 81 0 29 chr2 76971267 76971403 -176285180 - AluSc SINE Alu -4 305 174 1326 109 0 10 chr2 76971408 76971600 -176284983 - AluSx SINE Alu -10 300 111 710 121 10 0 chr2 76971674 76971773 -176284810 - AluSx SINE Alu -212 101 2 3661 106 33 44 chr2 76971773 76972123 -176284460 - Tigger3b DNA MER2_type -2393 635 294 1706 126 51 10 chr2 76972123 76972416 -176284167 + AluJb SINE Alu 1 305 -7 3661 106 33 44 chr2 76972416 76972706 -176283877 - Tigger3b DNA MER2_type -2734 294 2 449 294 62 20 chr2 76972842 76972988 -176283595 - L2 LINE L2 0 3272 3121 1982 132 7 0 chr2 76973065 76973368 -176283215 - AluSq SINE Alu -8 305 1 375 238 41 33 chr2 76973374 76973496 -176283087 - L1ME4a LINE L1 -286 5835 5713 458 298 91 10 chr2 76973535 76973743 -176282840 - L1ME4a LINE L1 -1823 4323 4099 2194 110 0 3 chr2 76973797 76974106 -176282477 + AluSq SINE Alu 1 308 -5 2233 111 3 0 chr2 76975193 76975500 -176281083 + AluSx SINE Alu 1 308 -4 2018 139 0 0 chr2 76976152 76976453 -176280130 + AluJb SINE Alu 1 301 -11 1731 182 44 23 chr2 76976564 76976937 -176279646 + L1MB7 LINE L1 5753 6131 -53 2074 109 7 0 chr2 76977011 76977304 -176279279 + AluSc SINE Alu 1 295 -14 670 246 0 0 chr2 76977940 76978066 -176278517 + FRAM SINE Alu 1 122 -54 225 0 0 0 chr2 76978102 76978127 -176278456 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 180 327 35 35 chr2 76978829 76978942 -176277641 - MER5A DNA MER1_type -67 122 10 212 333 0 0 chr2 76979029 76979092 -176277491 - L2 LINE L2 -338 2975 2913 245 319 181 21 chr2 76979216 76979404 -176277179 + L3 LINE CR1 1359 1576 -1 255 287 35 11 chr2 76979793 76979880 -176276703 - MLT1I LTR MaLR 0 549 461 279 278 134 48 chr2 76979967 76980154 -176276429 - MLT1I LTR MaLR -128 281 79 719 261 104 0 chr2 76980602 76980813 -176275770 - MIR SINE MIR -29 233 1 2299 83 7 0 chr2 76981071 76981371 -176275212 - AluSx SINE Alu -10 302 1 330 115 0 0 chr2 76981432 76981484 -176275099 + (TCC)n Simple_repeat Simple_repeat 1 52 0 494 170 170 9 chr2 76981724 76981836 -176274747 - MIR SINE MIR 0 262 133 432 240 10 117 chr2 76982135 76982331 -176274252 - LTR16A1 LTR ERVL -18 439 265 440 236 66 0 chr2 76982795 76982901 -176273682 + FLAM_A SINE Alu 1 113 -29 606 213 26 32 chr2 76983110 76983265 -176273318 - MLT2E LTR ERVL 0 628 475 752 252 47 23 chr2 76983271 76983485 -176273098 - MLT2E LTR ERVL -409 219 1 324 300 0 0 chr2 76983668 76983748 -176272835 + L2 LINE L2 3234 3313 0 249 244 0 39 chr2 76984026 76984104 -176272479 + MLT1K LTR MaLR 189 263 -325 1772 130 33 4 chr2 76984277 76984553 -176272030 + AluSx SINE Alu 1 284 -28 585 0 0 0 chr2 76984556 76984621 -176271962 + (GAAAA)n Simple_repeat Simple_repeat 4 68 0 2639 226 123 14 chr2 76984656 76985447 -176271136 + L1ME3A LINE L1 5259 6135 -35 2245 62 7 23 chr2 76985500 76985808 -176270775 - AluY SINE Alu -8 303 1 25 0 0 0 chr2 76985816 76985841 -176270742 + AT_rich Low_complexity Low_complexity 1 25 0 2142 110 56 0 chr2 76985848 76986377 -176270206 - MER51A LTR ERV1 0 634 2 274 23 47 0 chr2 76986538 76986581 -176270002 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 588 112 151 95 chr2 76988296 76988475 -176268108 + MER53 DNA DNA 1 189 0 684 214 157 48 chr2 76988488 76988819 -176267764 + MER113 DNA MER1_type? 7 373 -148 3186 251 151 34 chr2 76988819 76989040 -176267543 - L2 LINE L2 -2 3311 3117 2372 99 0 0 chr2 76989040 76989342 -176267241 - AluSq SINE Alu -11 302 1 3186 251 151 34 chr2 76989342 76990051 -176266532 - L2 LINE L2 -196 3117 2492 1534 181 11 4 chr2 76990051 76990311 -176266272 - AluJb SINE Alu -37 275 14 3186 251 151 34 chr2 76990311 76991296 -176265287 - L2 LINE L2 -821 2492 1175 2377 99 0 3 chr2 76991693 76992005 -176264578 - AluY SINE Alu 0 311 1 244 275 14 0 chr2 76992071 76992140 -176264443 - L2 LINE L2 -270 3002 2933 182 80 0 0 chr2 76992176 76992201 -176264382 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 2480 80 0 3 chr2 76992681 76992993 -176263590 - AluY SINE Alu 0 311 1 222 265 29 0 chr2 76993059 76993127 -176263456 - L2 LINE L2 -270 3002 2933 1123 134 0 13 chr2 76993154 76993339 -176263244 - AluSg/x SINE Alu 0 310 132 233 218 13 77 chr2 76993562 76993640 -176262943 + L2 LINE L2 3193 3265 -48 188 283 0 0 chr2 76995708 76995761 -176260822 + L2 LINE L2 3261 3313 0 2280 110 0 7 chr2 76996368 76996677 -176259906 + AluSx SINE Alu 1 307 -5 2134 123 7 10 chr2 76996689 76996997 -176259586 + AluSx SINE Alu 1 307 -5 750 172 0 8 chr2 76997027 76997155 -176259428 + AluSg/x SINE Alu 167 293 -19 386 273 55 44 chr2 76998770 76998953 -176257630 - L2 LINE L2 -189 3083 2899 209 258 0 30 chr2 76998993 76999059 -176257524 - L2 LINE L2 -475 2839 2776 329 293 14 36 chr2 76999098 76999238 -176257345 + L2 LINE L2 2745 2881 -433 256 290 52 36 chr2 76999485 76999678 -176256905 - L2 LINE L2 -887 2427 2232 660 290 117 75 chr2 76999706 77000405 -176256178 + L2 LINE L2 2515 3270 -2 258 163 20 0 chr2 77001363 77001412 -176255171 - MIR SINE MIR -4 258 209 492 310 110 66 chr2 77001618 77001810 -176254773 - L3 LINE CR1 -158 1419 1237 1979 146 17 0 chr2 77001810 77002104 -176254479 - AluSx SINE Alu -13 299 1 492 310 110 66 chr2 77002104 77002366 -176254217 - L3 LINE CR1 -340 1237 945 2135 154 33 0 chr2 77002510 77002847 -176253736 + MER7A DNA MER2_type 1 346 0 1721 188 155 9 chr2 77002847 77003318 -176253265 + MLT1F LTR MaLR 16 539 -3 350 254 52 22 chr2 77003492 77003626 -176252957 - L1ME4a LINE L1 -296 5825 5688 2216 118 0 3 chr2 77003807 77004111 -176252472 - AluSx SINE Alu -9 303 1 428 301 136 16 chr2 77004362 77004996 -176251587 - L1ME4a LINE L1 -1722 4424 3715 1490 201 3 37 chr2 77005060 77005359 -176251224 - AluJo SINE Alu -23 289 1 2225 119 10 0 chr2 77005549 77005844 -176250739 - AluSq SINE Alu -15 298 1 479 143 39 0 chr2 77005871 77005948 -176250635 - AluJo SINE Alu -14 298 219 287 59 0 0 chr2 77005948 77005982 -176250601 + U2 snRNA snRNA 1 34 -154 1410 183 0 8 chr2 77005982 77006217 -176250366 - AluJo SINE Alu -79 233 1 519 253 47 27 chr2 77007323 77007473 -176249110 + MIR SINE MIR 48 200 -62 1873 68 71 107 chr2 77007662 77007971 -176248612 + AluSg SINE Alu 1 298 -12 298 303 20 0 chr2 77010394 77010493 -176246090 - L2 LINE L2 -1 3271 3171 2234 113 0 0 chr2 77010858 77011151 -176245432 - AluSx SINE Alu -19 293 1 471 343 78 38 chr2 77014150 77014625 -176241958 + L2 LINE L2 2806 3299 -14 255 206 143 0 chr2 77014798 77014861 -176241722 + MER94 DNA DNA 11 82 -52 23 0 0 0 chr2 77015379 77015402 -176241181 + AT_rich Low_complexity Low_complexity 1 23 0 633 246 50 15 chr2 77015788 77015987 -176240596 + MER58A DNA MER1_type 11 216 -8 603 266 141 30 chr2 77015995 77016329 -176240254 + L2 LINE L2 1791 2161 -1153 706 169 109 16 chr2 77016347 77016531 -176240052 - Charlie4 DNA MER1_type 0 1961 1761 1693 59 0 0 chr2 77016538 77016742 -176239841 - AluY SINE Alu -2 309 106 275 261 126 8 chr2 77017378 77017497 -176239086 - L1MD3 LINE L1 -121 7874 7742 1807 109 44 7 chr2 77017534 77017808 -176238775 - AluSp SINE Alu -29 284 1 1794 130 34 65 chr2 77017853 77018175 -176238408 + AluSx SINE Alu 1 312 0 583 285 75 14 chr2 77018572 77018786 -176237797 + MIR SINE MIR 21 247 -15 44 96 0 0 chr2 77019090 77019225 -176237358 + GC_rich Low_complexity Low_complexity 1 135 0 325 204 0 0 chr2 77020566 77020615 -176235968 - AluJ/monomer SINE Alu -250 53 5 2130 116 7 0 chr2 77020694 77020987 -176235596 + AluSx SINE Alu 1 295 -17 1463 175 15 8 chr2 77021777 77022041 -176234542 - MLT1D LTR MaLR 0 505 251 659 205 8 0 chr2 77022170 77022292 -176234291 + AluJb SINE Alu 179 301 -11 810 131 0 0 chr2 77022318 77022440 -176234143 + FLAM_C SINE Alu 1 122 -11 326 256 81 0 chr2 77023282 77023368 -176233215 + L1MC/D LINE L1 5528 5620 -2188 2354 83 0 3 chr2 77023523 77023812 -176232771 + AluSc SINE Alu 1 288 -21 429 200 11 11 chr2 77024034 77024124 -176232459 - MER5B DNA MER1_type -17 161 72 1021 79 0 0 chr2 77024157 77024284 -176232299 + AluSp/q SINE Alu 179 305 -8 2364 103 0 0 chr2 77024756 77025068 -176231515 - AluSx SINE Alu 0 312 1 267 131 66 33 chr2 77025069 77025130 -176231453 - AluJo/FLAM SINE Alu -169 133 71 461 232 93 26 chr2 77025509 77025660 -176230923 - MER5B DNA MER1_type -17 161 1 482 244 170 0 chr2 77025780 77025915 -176230668 + MER5A DNA MER1_type 26 183 -6 254 282 39 13 chr2 77026578 77026656 -176229927 + L2 LINE L2 3234 3313 0 204 311 27 14 chr2 77027032 77027106 -176229477 + MIR3 SINE MIR 109 183 -25 183 42 0 0 chr2 77028301 77028325 -176228258 + (T)n Simple_repeat Simple_repeat 1 24 0 431 240 144 20 chr2 77029186 77029332 -176227251 + MIR SINE MIR 90 253 -9 1197 179 127 0 chr2 77029422 77029651 -176226932 + AluJo SINE Alu 1 258 -54 198 97 0 0 chr2 77030351 77030382 -176226201 - MIR SINE MIR -28 234 204 227 314 14 0 chr2 77030412 77030482 -176226101 - MIR SINE MIR -142 120 50 182 237 52 62 chr2 77032228 77032325 -176224258 + MIR3 SINE MIR 86 181 -27 1654 202 3 3 chr2 77032784 77033076 -176223507 + AluJo SINE Alu 6 297 -15 1316 208 137 35 chr2 77033754 77034148 -176222435 - MSTB2 LTR MaLR -23 434 1 186 43 0 0 chr2 77034149 77034172 -176222411 + (ATG)n Simple_repeat Simple_repeat 2 24 0 * 258 105 0 0 chr2 77034171 77034209 -176222374 + (TCG)n Simple_repeat Simple_repeat 2 39 0 2199 44 33 11 chr2 77034608 77034880 -176221703 - AluY SINE Alu -5 306 29 300 317 108 17 chr2 77035280 77035520 -176221063 - L2 LINE L2 -685 2629 2368 2238 90 27 0 chr2 77035972 77036273 -176220310 + AluSq SINE Alu 2 310 -3 1451 175 39 29 chr2 77036273 77036582 -176220001 - L1MB8 LINE L1 -53 6125 5814 1276 137 16 0 chr2 77036594 77036784 -176219799 - AluJo SINE Alu -38 274 82 249 233 11 44 chr2 77037631 77037721 -176218862 + MIR SINE MIR 44 130 -78 1916 138 64 25 chr2 77038145 77038506 -176218077 - THE1C LTR MaLR 0 375 1 22 0 0 0 chr2 77038884 77038906 -176217677 + AT_rich Low_complexity Low_complexity 1 22 0 2290 117 0 0 chr2 77039171 77039471 -176217112 + AluSq SINE Alu 1 300 -13 337 152 0 63 chr2 77039516 77039595 -176216988 - L1MB7 LINE L1 -2 6182 6109 1583 166 35 28 chr2 77039599 77039883 -176216700 + AluJo SINE Alu 8 293 -19 719 64 18 37 chr2 77039904 77040013 -176216570 + AluSq/x SINE Alu 16 122 -191 288 0 0 0 chr2 77040189 77040221 -176216362 + (TA)n Simple_repeat Simple_repeat 2 33 0 2262 123 3 0 chr2 77040221 77040529 -176216054 - AluSx SINE Alu -3 309 1 281 234 47 0 chr2 77040529 77040593 -176215990 + Tigger2 DNA MER2_type 2652 2718 0 519 236 68 40 chr2 77040594 77040742 -176215841 + L2 LINE L2 3158 3309 -4 613 257 111 54 chr2 77041161 77041511 -176215072 + MER57B LTR ERV1 65 434 0 1136 184 42 9 chr2 77041618 77041830 -176214753 + MER20 DNA MER1_type 1 219 0 2106 106 10 30 chr2 77041981 77042283 -176214300 - AluSx SINE Alu -14 298 3 313 254 40 40 chr2 77042290 77042416 -176214167 - L1MB8 LINE L1 -285 5836 5711 441 289 108 10 chr2 77042452 77042656 -176213927 - L1MB8 LINE L1 -1823 4323 4100 2341 105 0 3 chr2 77042714 77043018 -176213565 + AluSq SINE Alu 1 303 -10 2296 107 3 0 chr2 77044106 77044396 -176212187 + AluSx SINE Alu 1 291 -21 927 127 0 11 chr2 77044732 77044999 -176211584 + (G)n Simple_repeat Simple_repeat 1 265 0 746 264 99 0 chr2 77045548 77045760 -176210823 - MIR SINE MIR -29 233 1 2370 87 10 0 chr2 77046018 77046317 -176210266 - AluSx SINE Alu -10 302 1 260 61 0 93 chr2 77046318 77046377 -176210206 - FLAM_A SINE Alu -9 124 77 1323 86 6 11 chr2 77046513 77046688 -176209895 + AluSp SINE Alu 1 174 -139 763 153 35 0 chr2 77046933 77047077 -176209506 + L1MD3 LINE L1 7845 7993 -2 255 191 0 0 chr2 77047311 77047358 -176209225 + MER69 DNA AcHobo 12 58 -1168 407 273 0 96 chr2 77047446 77047655 -176208928 - LTR67 LTR ERVL -367 190 2 2184 117 7 16 chr2 77047863 77048171 -176208412 + AluSq SINE Alu 1 305 -8 603 125 11 0 chr2 77048318 77048406 -176208177 - 5S rRNA rRNA -31 90 2 207 250 134 46 chr2 77048410 77048626 -176207957 + L2 LINE L2 2394 2628 -686 2272 116 3 10 chr2 77048998 77049308 -176207275 - AluSx SINE Alu -4 308 1 370 265 96 0 chr2 77049721 77049857 -176206726 + MLT1J LTR MaLR 291 439 -72 1142 126 0 18 chr2 77049859 77050026 -176206557 - AluSg/x SINE Alu -12 300 137 264 321 107 0 chr2 77050294 77050378 -176206205 + MIR3 SINE MIR 82 174 -34 343 254 86 80 chr2 77050410 77050646 -176205937 + MIR SINE MIR 7 250 -12 252 149 64 53 chr2 77050705 77050799 -176205784 - L2 LINE L2 -245 3027 2933 206 333 65 35 chr2 77050912 77051113 -176205470 - L2 LINE L2 -217 3055 2849 2226 109 3 0 chr2 77051542 77051835 -176204748 - AluSx SINE Alu -18 294 1 309 212 59 12 chr2 77052021 77052106 -176204477 - MIR3 SINE MIR -109 99 11 244 230 243 0 chr2 77052526 77052600 -176203983 - L2 LINE L2 -1 3271 3180 632 264 83 36 chr2 77052636 77052912 -176203671 + MARNA DNA Mariner 254 542 -44 205 214 117 107 chr2 77053266 77053369 -176203214 - MIR SINE MIR -70 192 89 379 267 18 73 chr2 77053474 77053639 -176202944 + MER5B DNA MER1_type 1 156 -22 1585 172 3 71 chr2 77053898 77054195 -176202388 - AluJo SINE Alu -23 289 13 23 0 0 0 chr2 77054235 77054258 -176202325 + AT_rich Low_complexity Low_complexity 1 23 0 231 182 125 45 chr2 77054359 77054372 -176202211 - L1P LINE L1 -741 5410 5399 216 0 0 0 chr2 77054372 77054396 -176202187 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1994 117 0 31 chr2 77054398 77054688 -176201895 - AluSx SINE Alu -31 281 1 231 182 125 45 chr2 77054688 77054759 -176201824 - L1P LINE L1 -752 5399 5316 2572 58 0 6 chr2 77055039 77055351 -176201232 + AluY SINE Alu 1 310 -1 676 142 0 0 chr2 77055692 77055798 -176200785 - MER53 DNA DNA -83 106 1 218 56 28 0 chr2 77055967 77056003 -176200580 + (CAAAAA)n Simple_repeat Simple_repeat 2 38 0 2221 123 0 16 chr2 77056282 77056599 -176199984 - AluSx SINE Alu 0 312 1 419 270 135 25 chr2 77056944 77057008 -176199575 - MER5A DNA MER1_type 0 189 133 1653 170 40 17 chr2 77057008 77057308 -176199275 + AluJo SINE Alu 1 307 -5 419 270 135 25 chr2 77057308 77057406 -176199177 - MER5A DNA MER1_type -56 133 9 187 344 62 46 chr2 77057957 77058152 -176198431 - MIR SINE MIR -18 244 47 1663 164 109 0 chr2 77058589 77058863 -176197720 - AluJb SINE Alu -8 304 1 370 311 105 40 chr2 77059045 77059322 -176197261 + L2 LINE L2 2395 2689 -625 284 280 40 40 chr2 77059396 77059496 -176197087 - L2 LINE L2 -196 3076 2977 1251 245 77 16 chr2 77059859 77060234 -176196349 + MLT1I LTR MaLR 12 409 0 1930 111 93 0 chr2 77060420 77060699 -176195884 + AluSq SINE Alu 1 305 -8 449 244 50 17 chr2 77060876 77060995 -176195588 + MIR SINE MIR 47 169 -93 764 168 104 12 chr2 77061794 77061967 -176194616 - MER5A DNA MER1_type 0 189 1 193 283 190 15 chr2 77062605 77062810 -176193773 + L2 LINE L2 2040 2280 -1034 560 215 99 8 chr2 77063022 77063143 -176193440 + MIR SINE MIR 66 197 -65 367 278 9 9 chr2 77063194 77063302 -176193281 - MIR SINE MIR -152 110 3 2242 57 11 0 chr2 77114774 77115091 -176141492 + AluY SINE Alu 1 320 0 595 269 74 37 chr2 77115172 77115388 -176141195 - MIR SINE MIR -34 228 5 689 273 84 70 chr2 77115488 77115844 -176140739 + L1MC4a LINE L1 6542 6902 -906 525 181 50 91 chr2 77115851 77116050 -176140533 + L1MC5 LINE L1 7251 7441 -520 534 268 178 18 chr2 77116469 77116752 -176139831 + L1MB4 LINE L1 5327 5652 -514 2738 187 15 4 chr2 77116828 77117362 -176139221 + L1MB4 LINE L1 5635 6174 -6 1828 128 38 57 chr2 77117364 77117415 -176139168 + L1MB5 LINE L1 5816 5866 -308 2183 105 3 0 chr2 77117415 77117709 -176138874 - AluSq SINE Alu -14 299 5 1828 128 38 57 chr2 77117709 77118023 -176138560 + L1MB5 LINE L1 5866 6174 0 375 202 48 0 chr2 77118023 77118107 -176138476 + L1ME1 LINE L1 5816 5903 -263 392 164 19 77 chr2 77118109 77118213 -176138370 + L1MC4a LINE L1 6294 6391 -1417 905 198 50 10 chr2 77118218 77118420 -176138163 + L1MD3 LINE L1 7713 7922 -73 2052 116 3 0 chr2 77118545 77118837 -176137746 - AluSx SINE Alu -18 294 2 252 0 0 0 chr2 77119651 77119679 -176136904 + (T)n Simple_repeat Simple_repeat 1 28 0 181 177 63 89 chr2 77120023 77120102 -176136481 + MIR3 SINE MIR 1 77 -131 979 182 21 27 chr2 77120426 77120613 -176135970 - MER5A DNA MER1_type 0 189 4 231 36 0 0 chr2 77120824 77120852 -176135731 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 26 50 0 0 chr2 77121388 77121428 -176135155 + AT_rich Low_complexity Low_complexity 1 40 0 485 259 89 83 chr2 77121589 77121914 -176134669 - L1MC4a LINE L1 -1880 5928 5602 251 217 50 0 chr2 77121954 77122014 -176134569 + L1M4 LINE L1 3764 3826 -2320 27 0 0 0 chr2 77122073 77122100 -176134483 + AT_rich Low_complexity Low_complexity 1 27 0 2245 89 3 3 chr2 77122270 77122573 -176134010 + AluSg SINE Alu 1 303 -7 827 252 23 54 chr2 77122733 77122991 -176133592 - MIR SINE MIR 0 262 13 293 301 19 10 chr2 77122992 77123095 -176133488 + MIR3 SINE MIR 68 171 -37 242 36 0 0 chr2 77124904 77124932 -176131651 + L1M3 LINE L1 5822 5849 -334 189 274 20 0 chr2 77126296 77126347 -176130236 + L2 LINE L2 3219 3270 -2 873 119 66 20 chr2 77127397 77127548 -176129035 + L1MB3 LINE L1 5810 5967 -216 881 161 192 27 chr2 77127672 77127932 -176128651 + L1MC5 LINE L1 7611 7913 -48 1922 127 3 3 chr2 77127946 77128257 -176128326 + AluSx SINE Alu 1 311 0 1896 118 57 0 chr2 77129195 77129475 -176127108 + AluSx SINE Alu 1 296 -16 252 247 108 11 chr2 77129626 77129702 -176126881 + MIR SINE MIR 48 136 -72 1910 114 0 4 chr2 77129702 77129975 -176126608 - AluSx SINE Alu -8 304 33 252 247 108 11 chr2 77129975 77129991 -176126592 + MIR SINE MIR 136 149 -59 2451 40 7 0 chr2 77129995 77130299 -176126284 + AluY SINE Alu 2 307 -4 2112 82 9 41 chr2 77130311 77130630 -176125953 + AluSc SINE Alu 1 309 0 614 186 0 0 chr2 77130641 77130743 -176125840 + FLAM_C SINE Alu 7 108 -35 257 213 106 11 chr2 77131128 77131222 -176125361 + L1P LINE L1 5296 5398 -753 3148 124 95 0 chr2 77131296 77131778 -176124805 + MER1A DNA MER1_type 2 529 0 462 326 156 9 chr2 77131778 77132106 -176124477 + L1MC4a LINE L1 5498 5873 -1935 2105 98 34 0 chr2 77132286 77132406 -176124177 + AluSx SINE Alu 1 115 -197 369 0 0 0 chr2 77132406 77132447 -176124136 + (CA)n Simple_repeat Simple_repeat 2 42 0 2105 98 34 0 chr2 77132447 77132621 -176123962 + AluSx SINE Alu 115 305 -7 1576 138 58 10 chr2 77132671 77132805 -176123778 + L1M4 LINE L1 5186 5312 -872 2375 70 0 0 chr2 77132805 77133106 -176123477 + AluY SINE Alu 1 301 -10 1576 138 58 10 chr2 77133106 77133364 -176123219 + L1M4 LINE L1 5312 5755 -429 1439 74 0 15 chr2 77133394 77133596 -176122987 + AluSq SINE Alu 45 243 -70 699 110 0 0 chr2 77133597 77133697 -176122886 + AluSg/x SINE Alu 205 304 -8 28 71 0 0 chr2 77133981 77134037 -176122546 + AT_rich Low_complexity Low_complexity 1 56 0 216 225 0 0 chr2 77134157 77134197 -176122386 - MER5A DNA MER1_type 0 189 150 22 35 0 0 chr2 77134942 77134971 -176121612 + GC_rich Low_complexity Low_complexity 1 29 0 2476 139 5 93 chr2 77135466 77135560 -176121023 - L1MB7 LINE L1 0 6184 6083 1679 144 50 10 chr2 77135560 77135859 -176120724 - AluJo SINE Alu -1 311 1 2476 139 5 93 chr2 77135859 77135898 -176120685 - L1MB7 LINE L1 -101 6083 6042 1957 89 13 70 chr2 77135898 77136214 -176120369 - AluSx SINE Alu -14 298 1 2476 139 5 93 chr2 77136214 77136479 -176120104 - L1MB7 LINE L1 -142 6042 5845 2010 124 3 10 chr2 77136479 77136793 -176119790 + AluJb SINE Alu 1 312 0 2476 139 5 93 chr2 77136793 77136953 -176119630 - L1MB7 LINE L1 -339 5845 5673 33 0 0 0 chr2 77137272 77137305 -176119278 + AT_rich Low_complexity Low_complexity 1 33 0 1846 149 0 3 chr2 77137392 77137694 -176118889 + AluJb SINE Alu 1 301 -11 1426 131 0 0 chr2 77138544 77138766 -176117817 + AluJb SINE Alu 84 305 -7 2269 94 0 3 chr2 77138872 77139181 -176117402 + AluSx SINE Alu 1 308 -4 979 144 12 17 chr2 77139181 77139354 -176117229 + AluSg/x SINE Alu 124 295 -15 2114 77 11 3 chr2 77139356 77139643 -176116940 + AluSp SINE Alu 1 289 -24 22 0 0 0 chr2 77139637 77139659 -176116924 + AT_rich Low_complexity Low_complexity 1 22 0 1336 100 0 0 chr2 77139659 77139829 -176116754 + AluSg/x SINE Alu 123 292 -20 341 148 0 0 chr2 77139830 77139884 -176116699 + HY4 scRNA scRNA 40 93 0 1651 151 54 18 chr2 77139916 77140195 -176116388 - AluJo SINE Alu -22 290 2 1267 295 199 44 chr2 77140247 77140509 -176116074 - L2 LINE L2 -273 3040 2820 296 300 0 30 chr2 77140509 77140547 -176116036 + AluJo SINE Alu 101 135 -167 1759 180 17 0 chr2 77140547 77140836 -176115747 + AluJb SINE Alu 1 294 -18 1267 295 199 44 chr2 77140609 77141291 -176115292 - L2 LINE L2 -493 2820 2245 323 60 20 0 chr2 77141291 77141341 -176115242 + (TA)n Simple_repeat Simple_repeat 1 51 0 1505 102 20 0 chr2 77141348 77141544 -176115039 - AluSg/x SINE Alu -30 280 81 2443 86 3 0 chr2 77141554 77141857 -176114726 - AluSg SINE Alu -6 304 1 1267 295 199 44 chr2 77141857 77141986 -176114597 - L2 LINE L2 -1080 2233 1990 2254 66 11 0 chr2 77141993 77142279 -176114304 + AluY SINE Alu 1 289 -22 2269 91 7 0 chr2 77143049 77143335 -176113248 - AluSg SINE Alu -20 290 3 731 112 0 60 chr2 77143337 77143453 -176113130 - AluSg/x SINE Alu -18 292 184 671 280 44 22 chr2 77143761 77143986 -176112597 - MIR SINE MIR -11 251 22 252 248 9 18 chr2 77144138 77144247 -176112336 + CT-rich Low_complexity Low_complexity 3 110 0 1786 152 4 0 chr2 77144271 77144541 -176112042 + AluJb SINE Alu 1 271 -41 1948 158 37 0 chr2 77144653 77144950 -176111633 + AluJb SINE Alu 1 308 -4 874 196 0 0 chr2 77145193 77145336 -176111247 - AluJb SINE Alu -12 300 158 374 205 73 66 chr2 77145339 77145490 -176111093 - LTR27 LTR ERV1 0 636 485 2482 174 15 29 chr2 77145530 77146081 -176110502 - LTR27 LTR ERV1 -139 497 4 910 209 71 5 chr2 77146151 77146347 -176110236 - MIR SINE MIR -5 257 49 648 184 251 0 chr2 77146496 77146659 -176109924 - MIR SINE MIR 0 262 59 2084 147 0 3 chr2 77146701 77147001 -176109582 + AluSx SINE Alu 1 299 -13 2092 124 3 13 chr2 77147030 77147329 -176109254 + AluSx SINE Alu 1 296 -16 2287 78 46 0 chr2 77147439 77147722 -176108861 + AluSx SINE Alu 1 296 -16 329 192 0 0 chr2 77148317 77148369 -176108214 + L1MC4 LINE L1 6652 6703 -1339 230 152 0 0 chr2 77148373 77148419 -176108164 - L1MC4 LINE L1 -1339 6703 6658 2057 136 0 17 chr2 77148862 77149157 -176107426 - AluSg SINE Alu -20 290 1 322 217 275 0 chr2 77150861 77150999 -176105584 + L1MC4 LINE L1 6889 7064 -978 1649 142 61 30 chr2 77151135 77151260 -176105323 - AluJb SINE Alu -7 305 185 1954 226 33 72 chr2 77151260 77151897 -176104686 + LTR9 LTR ERV1 1 612 0 1649 142 61 30 chr2 77151897 77151956 -176104627 - AluJb SINE Alu -127 185 129 4640 94 1 58 chr2 77151956 77152326 -176104257 - MER4A LTR ERV1 0 664 350 2160 99 7 0 chr2 77152326 77152645 -176103938 + AluSq SINE Alu 1 321 0 4640 94 1 58 chr2 77152645 77152977 -176103606 - MER4A LTR ERV1 -314 350 1 1649 142 61 30 chr2 77152977 77153087 -176103496 - AluJb SINE Alu -183 129 1 2169 117 0 0 chr2 77153093 77153414 -176103169 - AluSc SINE Alu 0 321 1 1765 149 19 4 chr2 77153414 77153682 -176102901 - AluJo SINE Alu -30 282 11 21 0 0 0 chr2 77153778 77153799 -176102784 + AT_rich Low_complexity Low_complexity 1 21 0 725 223 38 38 chr2 77153816 77153936 -176102647 - LTR8 LTR ERV1 -1 690 568 2091 81 36 72 chr2 77153936 77154243 -176102340 - AluSg SINE Alu -14 296 1 725 223 38 38 chr2 77154243 77154306 -176102277 - LTR8 LTR ERV1 -122 569 507 487 171 33 99 chr2 77154285 77154437 -176102146 - LTR8A LTR ERV1 -585 142 1 * 1680 121 0 0 chr2 77154801 77155025 -176101558 + AluSg/x SINE Alu 85 308 -2 1515 158 118 115 chr2 77155049 77155189 -176101394 - L1MD3 LINE L1 -1 8036 7898 1560 167 39 97 chr2 77155189 77155372 -176101211 + MLT1B LTR MaLR 1 193 -197 1737 190 0 13 chr2 77155372 77155688 -176100895 + AluJb SINE Alu 1 312 0 1560 167 39 97 chr2 77155688 77155851 -176100732 + MLT1B LTR MaLR 193 322 -68 2181 132 7 0 chr2 77155851 77156154 -176100429 - AluSx SINE Alu -7 305 1 1560 167 39 97 chr2 77156154 77156220 -176100363 + MLT1B LTR MaLR 322 390 0 1515 158 118 115 chr2 77156220 77156646 -176099937 - L1MD3 LINE L1 -139 7898 7481 474 188 77 8 chr2 77156817 77156934 -176099649 - L1MC4 LINE L1 -588 7454 7330 288 203 14 54 chr2 77156934 77157008 -176099575 - MLT1B LTR MaLR -61 329 259 2057 117 13 10 chr2 77157008 77157316 -176099267 - AluSq SINE Alu -4 309 1 384 120 43 145 chr2 77157321 77157365 -176099218 - L1MC4 LINE L1 -742 7300 7253 617 158 274 0 chr2 77157365 77157511 -176099072 - MER53 DNA DNA -3 186 1 384 120 43 145 chr2 77157511 77157583 -176099000 - L1MC4 LINE L1 -789 7253 7196 952 183 17 6 chr2 77157630 77157805 -176098778 - AluJb SINE Alu -6 306 130 300 127 18 0 chr2 77157808 77157863 -176098720 - L1MC4 LINE L1 -868 7174 7119 316 148 0 19 chr2 77157889 77157943 -176098640 + L2 LINE L2 3261 3313 0 745 153 23 73 chr2 77159008 77159204 -176097379 + L1MB3 LINE L1 5950 6136 -38 1109 83 122 0 chr2 77159204 77159360 -176097223 + FRAM SINE Alu 1 168 -8 224 348 135 11 chr2 77159553 77159642 -176096941 - L2 LINE L2 -20 3293 3194 2194 122 0 0 chr2 77160620 77160907 -176095676 - AluSx SINE Alu -14 298 12 1429 154 106 41 chr2 77160977 77161270 -176095313 - AluJb SINE Alu 0 312 1 189 107 0 0 chr2 77161574 77161602 -176094981 + (T)n Simple_repeat Simple_repeat 1 28 0 302 246 0 105 chr2 77161797 77161911 -176094672 - L1MC4 LINE L1 -1340 6702 6601 2116 102 0 57 chr2 77162141 77162456 -176094127 - AluSc SINE Alu -12 297 1 2080 130 3 20 chr2 77162777 77163078 -176093505 - AluSx SINE Alu -16 296 1 795 159 126 0 chr2 77163269 77163420 -176093163 + AluYa5 SINE Alu 132 301 -10 725 0 12 0 chr2 77163616 77163701 -176092882 + (TTTAG)n Simple_repeat Simple_repeat 3 88 0 2154 119 0 0 chr2 77163701 77163986 -176092597 - AluSx SINE Alu -27 285 1 2239 112 3 0 chr2 77164592 77164895 -176091688 - AluSg SINE Alu -6 304 1 192 77 0 0 chr2 77165271 77165297 -176091286 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 783 148 9 0 chr2 77165299 77165414 -176091169 - FLAM_C SINE Alu -26 117 2 2218 79 3 63 chr2 77166481 77166799 -176089784 - AluSp SINE Alu -14 299 1 2075 100 4 11 chr2 77166895 77167199 -176089384 - AluSc SINE Alu 0 302 1 1179 149 20 0 chr2 77167199 77167394 -176089189 + AluY SINE Alu 98 296 -15 914 168 111 0 chr2 77167395 77167603 -176088980 + L1MB3 LINE L1 5953 6183 0 440 293 9 84 chr2 77167636 77167851 -176088732 + MER102a DNA MER1_type 102 300 -30 362 78 20 0 chr2 77167973 77168024 -176088559 - MER1B DNA MER1_type 0 329 278 * 1344 130 54 9 chr2 77168016 77168239 -176088344 - MER1B DNA MER1_type -64 233 1 198 314 164 7 chr2 77168421 77168561 -176088022 + L2 LINE L2 2601 2762 -552 463 165 0 52 chr2 77168835 77168932 -176087651 - L1MB8 LINE L1 -6 6172 6081 2086 143 0 10 chr2 77168949 77169257 -176087326 + AluJo SINE Alu 1 305 -7 2863 186 19 7 chr2 77169269 77169851 -176086732 - L1MB4 LINE L1 -28 6152 5564 2208 116 17 0 chr2 77170807 77171101 -176085482 + AluSg SINE Alu 1 299 -11 1614 209 49 49 chr2 77171140 77171242 -176085341 - L1ME1 LINE L1 -12 6154 6053 2246 134 0 0 chr2 77171242 77171548 -176085035 + AluSx SINE Alu 1 306 -6 1614 209 49 49 chr2 77171548 77171876 -176084707 - L1ME1 LINE L1 -112 6054 5724 396 323 115 30 chr2 77173764 77173999 -176082584 - MIR SINE MIR -6 256 2 529 202 77 55 chr2 77174323 77174464 -176082119 + MER3 DNA MER1_type 1 148 -61 2149 112 20 10 chr2 77174464 77174758 -176081825 + AluSx SINE Alu 1 297 -15 529 202 77 55 chr2 77174758 77174799 -176081784 + MER3 DNA MER1_type 148 187 -22 261 0 0 0 chr2 77174872 77174901 -176081682 + (GGCTG)n Simple_repeat Simple_repeat 5 33 0 1077 270 186 35 chr2 77176441 77177464 -176079119 - L2 LINE L2 0 3313 2138 30 0 0 0 chr2 77177928 77177958 -176078625 + AT_rich Low_complexity Low_complexity 1 30 0 372 233 174 24 chr2 77177971 77178218 -176078365 - L1ME4a LINE L1 -104 6017 5722 520 298 68 35 chr2 77178287 77178550 -176078033 - L1ME4a LINE L1 -559 5562 5290 2470 90 0 3 chr2 77178925 77179237 -176077346 + AluSq SINE Alu 1 311 -2 2182 141 3 3 chr2 77179250 77179562 -176077021 + AluJb SINE Alu 1 312 0 348 83 0 0 chr2 77179628 77179676 -176076907 + (CA)n Simple_repeat Simple_repeat 1 48 0 1752 216 66 39 chr2 77179877 77180420 -176076163 - MER74A LTR ERVL 0 558 1 384 282 176 12 chr2 77180609 77181034 -176075549 + L1ME4a LINE L1 5626 6120 -1 2086 96 4 0 chr2 77181037 77181297 -176075286 - AluSq SINE Alu -15 298 38 27 0 0 0 chr2 77190577 77190604 -176065979 + AT_rich Low_complexity Low_complexity 1 27 0 245 279 0 0 chr2 77190839 77190907 -176065676 + T-rich Low_complexity Low_complexity 1 68 0 326 269 69 93 chr2 77191976 77192337 -176064246 - L3 LINE CR1 -196 1381 960 192 251 221 43 chr2 77192368 77192531 -176064052 + MIR SINE MIR 71 262 0 274 294 130 11 chr2 77192598 77192775 -176063808 - L3 LINE CR1 -671 906 709 352 178 13 0 chr2 77193945 77194011 -176062572 + MER91B DNA MER1_type 12 81 -59 388 266 5 5 chr2 77194031 77194142 -176062441 - MER115 DNA AcHobo -580 113 3 430 263 11 11 chr2 77194146 77194241 -176062342 - MIR SINE MIR -147 115 21 206 299 116 48 chr2 77194451 77194658 -176061925 + L2 LINE L2 2614 2834 -480 33 25 0 0 chr2 77195020 77195060 -176061523 + AT_rich Low_complexity Low_complexity 1 40 0 2124 114 0 19 chr2 77195156 77195471 -176061112 + AluSg SINE Alu 1 309 -1 7014 151 15 35 chr2 77195471 77195544 -176061039 + L1PB3 LINE L1 4018 4091 -2063 2113 80 21 3 chr2 77195544 77195831 -176060752 + AluSg SINE Alu 1 292 -18 7014 151 15 35 chr2 77195831 77196669 -176059914 + L1PB3 LINE L1 4091 4944 -1210 1673 87 4 4 chr2 77196669 77196900 -176059683 + L1PB2 LINE L1 5920 6150 -1 492 84 121 0 chr2 77196900 77196978 -176059605 + L1MB4 LINE L1 6086 6178 -2 7014 151 15 35 chr2 77196978 77197005 -176059578 + L1PB3 LINE L1 4943 4969 -1185 2192 105 0 7 chr2 77197005 77197310 -176059273 + AluSx SINE Alu 1 303 -9 7014 151 15 35 chr2 77197310 77198009 -176058574 + L1PB3 LINE L1 4969 6148 -6 1630 182 7 3 chr2 77198167 77198464 -176058119 + AluJb SINE Alu 1 298 -14 2518 81 22 3 chr2 77198480 77198837 -176057746 + L1M2 LINE L1 5324 5687 -610 1948 102 16 33 chr2 77198840 77199143 -176057440 + AluSx SINE Alu 5 302 -10 366 59 0 0 chr2 77199143 77199194 -176057389 + L1MA5A LINE L1 6245 6295 -2 303 119 0 0 chr2 77199231 77199273 -176057310 + Alu SINE Alu 2 43 -265 183 256 144 32 chr2 77199437 77199562 -176057021 - L2 LINE L2 -656 2658 2520 819 161 12 37 chr2 77199575 77199586 -176056997 - AluJb SINE Alu -4 308 298 1632 124 0 0 chr2 77199586 77199812 -176056771 - AluSx SINE Alu -86 226 1 819 161 12 37 chr2 77199812 77199961 -176056622 - AluJb SINE Alu -14 298 152 318 277 10 0 chr2 77199975 77200076 -176056507 - L1MD3 LINE L1 -12 7983 7882 500 88 0 152 chr2 77200105 77200192 -176056391 + Tigger2 DNA MER2_type 166 230 -2488 2107 112 0 0 chr2 77200192 77200479 -176056104 - AluSg SINE Alu -23 287 1 500 88 0 152 chr2 77200479 77200516 -176056067 + Tigger2 DNA MER2_type 230 271 -2447 1965 164 9 6 chr2 77200516 77200846 -176055737 + Tigger2 DNA MER2_type 447 777 -1941 1019 93 157 0 chr2 77200877 77201088 -176055495 + Tigger2 DNA MER2_type 2451 2704 -14 266 182 15 0 chr2 77201112 77201178 -176055405 + (CATATA)n Simple_repeat Simple_repeat 4 70 0 1987 235 57 52 chr2 77201178 77201509 -176055074 - L1MC4 LINE L1 -150 7892 7564 2208 91 10 0 chr2 77201509 77201806 -176054777 + AluSx SINE Alu 1 300 -12 1987 235 57 52 chr2 77201806 77202192 -176054391 - L1MC4 LINE L1 -478 7564 7171 395 131 16 0 chr2 77202293 77202354 -176054229 - AluS SINE Alu -237 62 1 203 173 77 58 chr2 77202362 77202414 -176054169 + MIR SINE MIR 100 152 -110 257 158 35 0 chr2 77202796 77202853 -176053730 + C-rich Low_complexity Low_complexity 5 63 0 1231 183 102 4 chr2 77202860 77203106 -176053477 - AluJo SINE Alu -38 274 5 2101 109 13 0 chr2 77203791 77204095 -176052488 - AluSx SINE Alu -4 308 1 2271 85 0 28 chr2 77204159 77204476 -176052107 - AluY SINE Alu -3 308 1 621 130 7 143 chr2 77204486 77204640 -176051943 - FLAM_C SINE Alu 0 133 1 2261 90 7 0 chr2 77205711 77206010 -176050573 - AluSg SINE Alu -9 301 1 22 0 0 0 chr2 77206431 77206453 -176050130 + AT_rich Low_complexity Low_complexity 1 22 0 1110 49 0 7 chr2 77206870 77207012 -176049571 - AluSg/x SINE Alu -8 302 162 343 133 0 0 chr2 77207012 77207057 -176049526 - Alu SINE Alu -255 45 1 316 153 14 14 chr2 77207066 77207138 -176049445 + CT-rich Low_complexity Low_complexity 1 72 0 200 200 0 25 chr2 77207138 77207178 -176049405 + C-rich Low_complexity Low_complexity 4 42 0 2083 113 7 7 chr2 77207183 77207493 -176049090 - AluSx SINE Alu -2 310 1 1786 151 6 19 chr2 77207817 77208129 -176048454 - AluSx SINE Alu -4 308 1 1863 151 0 40 chr2 77208191 77208515 -176048068 - AluJb SINE Alu -1 311 1 754 158 0 30 chr2 77210352 77210485 -176046098 - FLAM_C SINE Alu 0 133 5 2146 117 0 0 chr2 77210535 77210833 -176045750 - AluSx SINE Alu -14 298 1 23 33 0 0 chr2 77211513 77211543 -176045040 + AT_rich Low_complexity Low_complexity 1 30 0 1482 187 14 14 chr2 77211543 77211832 -176044751 - AluJo SINE Alu -12 290 2 327 227 0 15 chr2 77211963 77212029 -176044554 - L2 LINE L2 -14 3258 3194 2047 108 3 3 chr2 77212732 77213028 -176043555 - AluSx SINE Alu -16 296 1 25 0 0 0 chr2 77213327 77213352 -176043231 + AT_rich Low_complexity Low_complexity 1 25 0 188 219 49 0 chr2 77213449 77213490 -176043093 - MIR SINE MIR -117 145 103 453 19 0 0 chr2 77214101 77214155 -176042428 + (TG)n Simple_repeat Simple_repeat 2 55 0 2507 61 0 0 chr2 77215429 77215740 -176040843 - AluY SINE Alu 0 311 1 2275 81 0 10 chr2 77215757 77216067 -176040516 - AluY SINE Alu -4 307 1 1526 184 104 13 chr2 77217370 77217679 -176038904 + MER1B DNA MER1_type 1 337 0 2232 86 0 7 chr2 77217925 77218226 -176038357 - AluSg SINE Alu -11 299 1 213 286 63 0 chr2 77218560 77218623 -176037960 + L2 LINE L2 3246 3312 -1 194 267 155 43 chr2 77219000 77219116 -176037467 + MIR3 SINE MIR 79 207 -1 2120 114 0 0 chr2 77220235 77220533 -176036050 + AluSx SINE Alu 1 298 -14 577 195 81 32 chr2 77220543 77220666 -176035917 - MER5A DNA MER1_type -1 188 60 251 178 219 0 chr2 77220666 77220739 -176035844 + L1ME1 LINE L1 6077 6165 -1 270 167 75 50 chr2 77220751 77220852 -176035731 + MIR SINE MIR 50 146 -62 420 220 40 10 chr2 77220990 77221090 -176035493 - MER5B DNA MER1_type -4 174 72 297 162 73 0 chr2 77221319 77221387 -176035196 - L1MC4 LINE L1 0 8042 7970 213 238 133 77 chr2 77222464 77222607 -176033976 + MIR SINE MIR 112 262 0 2075 113 13 7 chr2 77223265 77223574 -176033009 + AluSx SINE Alu 1 311 -1 795 176 0 0 chr2 77224024 77224155 -176032428 - FLAM_C SINE Alu -2 131 1 1990 94 3 49 chr2 77224167 77224475 -176032108 - AluSx SINE Alu -18 294 1 1511 116 167 4 chr2 77224801 77225059 -176031524 - AluJo SINE Alu -12 300 1 430 219 12 0 chr2 77225377 77225459 -176031124 - 7SLRNA srpRNA srpRNA -237 83 1 2376 84 0 0 chr2 77225715 77226026 -176030557 - AluSq SINE Alu -2 311 1 367 280 107 12 chr2 77226457 77226625 -176029958 + MIR SINE MIR 7 190 -72 2194 94 7 3 chr2 77229087 77229396 -176027187 - AluY SINE Alu -1 310 1 948 158 54 27 chr2 77229478 77229662 -176026921 - MER5A DNA MER1_type 0 189 1 669 281 60 0 chr2 77230231 77230416 -176026167 + MIR SINE MIR 23 218 -44 358 265 43 52 chr2 77230945 77231175 -176025408 - HAL1 LINE L1 -4 2503 2276 355 244 0 0 chr2 77231523 77231601 -176024982 - HAL1 LINE L1 -359 2148 2071 394 188 12 12 chr2 77231640 77231720 -176024863 - MER116 DNA Mariner 0 80 1 2334 70 0 0 chr2 77231897 77232195 -176024388 - AluY SINE Alu -13 298 1 1775 222 115 47 chr2 77232691 77232739 -176023844 + L1ME LINE L1 4336 4379 -1783 2129 95 0 0 chr2 77232739 77233052 -176023531 + AluSx SINE Alu 1 313 0 1775 222 115 47 chr2 77233052 77234091 -176022492 + L1ME LINE L1 4379 5507 -655 300 111 0 0 chr2 77234925 77234979 -176021604 + (TA)n Simple_repeat Simple_repeat 1 54 0 244 345 65 7 chr2 77235093 77235232 -176021351 + L2 LINE L2 2917 3063 -209 1365 146 0 5 chr2 77235490 77235702 -176020881 + AluJo SINE Alu 85 295 -17 974 157 0 0 chr2 77236169 77236350 -176020233 - AluSg/x SINE Alu 0 316 136 2263 100 0 3 chr2 77236378 77236689 -176019894 + AluSx SINE Alu 1 310 -2 209 227 0 23 chr2 77236761 77236805 -176019778 - MER5B DNA MER1_type -126 52 10 725 246 108 0 chr2 77237334 77237529 -176019054 - MIR SINE MIR -21 241 26 1847 133 0 4 chr2 77237609 77237873 -176018710 - AluSx SINE Alu -49 263 1 367 205 72 24 chr2 77239196 77239279 -176017304 - MER5A DNA MER1_type 0 189 103 503 173 31 27 chr2 77239290 77239511 -176017072 + CT-rich Low_complexity Low_complexity 1 221 0 626 139 81 21 chr2 77239511 77239528 -176017055 - MER5A DNA MER1_type -62 116 101 804 161 0 36 chr2 77239528 77239665 -176016918 - FLAM_A SINE Alu -1 132 1 626 139 81 21 chr2 77239665 77239766 -176016817 - MER5A DNA MER1_type -77 101 4 2165 105 0 3 chr2 77239958 77240264 -176016319 + AluSc SINE Alu 1 305 -4 563 309 162 39 chr2 77241143 77241525 -176015058 - L3 LINE CR1 -58 1519 1091 2369 91 0 0 chr2 77242440 77242736 -176013847 - AluSx SINE Alu -16 296 1 322 308 26 0 chr2 77242832 77242949 -176013634 - MIR3 SINE MIR -1 207 88 657 304 69 76 chr2 77243770 77243911 -176012672 - L2 LINE L2 -2 3270 3130 1336 165 9 5 chr2 77243911 77244129 -176012454 - MER20 DNA MER1_type 0 219 1 657 304 69 76 chr2 77244129 77244448 -176012135 - L2 LINE L2 -142 3130 2813 958 162 87 0 chr2 77246003 77246176 -176010407 - MER20 DNA MER1_type 0 219 32 1156 200 133 31 chr2 77246440 77246853 -176009730 + MLT1C LTR MaLR 1 460 -7 186 208 0 0 chr2 77247180 77247228 -176009355 + (CCA)n Simple_repeat Simple_repeat 1 48 0 348 266 133 21 chr2 77247373 77247516 -176009067 - L1MC4 LINE L1 -5 8037 7879 1949 144 3 7 chr2 77247518 77247802 -176008781 - AluJb SINE Alu -23 289 7 342 273 31 47 chr2 77248206 77248334 -176008249 + MIR SINE MIR 3 128 -134 3354 130 2 10 chr2 77248510 77249027 -176007556 - MER75 DNA T2_type -1 513 1 180 0 0 0 chr2 77249553 77249573 -176007010 + (T)n Simple_repeat Simple_repeat 1 20 0 273 134 179 0 chr2 77249574 77249641 -176006942 - AluYb8 SINE Alu -146 162 84 1216 196 9 5 chr2 77249641 77249860 -176006723 - AluJb SINE Alu -92 220 1 624 184 0 0 chr2 77250098 77250201 -176006382 + AluSg/x SINE Alu 192 294 -16 1089 105 0 7 chr2 77250203 77250356 -176006227 + AluY SINE Alu 1 152 -159 6403 70 12 54 chr2 77250438 77251812 -176004771 + SVA Other Other 344 1386 0 2033 94 90 0 chr2 77251871 77252148 -176004435 - AluSx SINE Alu -10 302 1 892 148 0 22 chr2 77252565 77252700 -176003883 - FLAM_C SINE Alu 0 133 2 511 175 21 10 chr2 77252802 77252899 -176003684 - FLAM_A SINE Alu -19 123 26 2449 70 3 7 chr2 77253367 77253669 -176002914 - AluY SINE Alu -10 301 1 1502 155 69 9 chr2 77255231 77255548 -176001035 + L1MC3 LINE L1 7450 7785 0 1506 176 72 11 chr2 77255581 77255683 -176000900 + AluJb SINE Alu 14 108 -204 204 40 0 0 chr2 77255683 77255708 -176000875 + (CAA)n Simple_repeat Simple_repeat 3 27 0 1506 176 72 11 chr2 77255708 77255884 -176000699 + AluJb SINE Alu 108 309 -3 2317 91 3 52 chr2 77255884 77256213 -176000370 + AluSp SINE Alu 1 313 0 2148 122 7 10 chr2 77256217 77256521 -176000062 + AluSx SINE Alu 1 303 -9 2349 96 0 3 chr2 77256678 77256980 -175999603 + AluSx SINE Alu 1 301 -11 247 276 65 57 chr2 77257943 77258066 -175998517 + MER5B DNA MER1_type 55 178 0 1650 169 14 11 chr2 77259275 77259553 -175997030 - AluJo SINE Alu -33 279 1 2220 113 0 49 chr2 77259753 77260081 -175996502 - AluSx SINE Alu 0 312 1 2090 174 54 64 chr2 77260152 77260602 -175995981 - MLT1F1 LTR MaLR -2 565 119 2406 101 0 0 chr2 77260602 77260910 -175995673 - AluSg SINE Alu -2 308 1 2090 174 54 64 chr2 77260910 77260975 -175995608 - MLT1F1 LTR MaLR -448 119 55 568 289 116 44 chr2 77261496 77261901 -175994682 - LTR67 LTR ERVL -43 514 81 596 249 91 64 chr2 77262673 77262819 -175993764 - L1MC4a LINE L1 -1638 6170 6029 1978 170 0 0 chr2 77262819 77263119 -175993464 - AluJb SINE Alu -12 300 1 596 249 91 64 chr2 77263119 77263240 -175993343 - L1MC4a LINE L1 -1779 6029 5913 1279 98 132 5 chr2 77263240 77263444 -175993139 - MER30 DNA MER1_type 0 230 1 596 249 91 64 chr2 77263444 77263625 -175992958 - L1MC4a LINE L1 -1895 5913 5709 379 265 104 49 chr2 77264041 77264396 -175992187 + MLT1K LTR MaLR 179 580 -8 287 346 88 15 chr2 77264419 77264555 -175992028 - MIR3 SINE MIR -37 171 26 339 288 90 9 chr2 77264995 77265106 -175991477 - MIR3 SINE MIR -21 187 68 248 258 30 15 chr2 77265111 77265177 -175991406 - L2 LINE L2 -13 3259 3193 187 293 0 69 chr2 77265861 77265919 -175990664 + L2 LINE L2 3204 3257 -15 834 128 56 0 chr2 77266735 77266860 -175989723 + AluJb SINE Alu 3 134 -178 2313 82 0 0 chr2 77266872 77267151 -175989432 + AluSx SINE Alu 1 279 -33 293 254 0 0 chr2 77267307 77267370 -175989213 - L2 LINE L2 -10 3262 3200 901 244 61 18 chr2 77267602 77267831 -175988752 - MIR SINE MIR -11 251 13 2558 53 0 13 chr2 77270030 77270331 -175986252 - AluY SINE Alu -14 297 1 2412 77 0 35 chr2 77270560 77270870 -175985713 - AluSq SINE Alu -14 299 1 2369 84 0 10 chr2 77270878 77271174 -175985409 - AluSg SINE Alu -12 298 6 192 77 0 0 chr2 77271382 77271408 -175985175 + (TG)n Simple_repeat Simple_repeat 1 26 0 386 343 21 0 chr2 77271573 77271713 -175984870 + MIR3 SINE MIR 52 194 -14 356 245 159 33 chr2 77272459 77272610 -175983973 - MIR SINE MIR -91 171 2 2406 104 3 0 chr2 77272856 77273164 -175983419 - AluSq SINE Alu -4 309 1 225 65 0 0 chr2 77274519 77274550 -175982033 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 382 340 104 7 chr2 77275231 77275510 -175981073 - L2 LINE L2 -589 2725 2420 594 289 206 15 chr2 77276093 77276249 -175980334 + MLT1K LTR MaLR 78 203 -385 1200 148 20 0 chr2 77276249 77276445 -175980138 - L1PA16 LINE L1 -3 6163 5964 594 289 206 15 chr2 77276445 77276627 -175979956 + MLT1K LTR MaLR 203 481 -107 214 258 67 34 chr2 77276637 77276726 -175979857 - L3 LINE CR1 -1301 276 185 951 144 0 13 chr2 77276736 77276889 -175979694 + AluSq/x SINE Alu 1 151 -161 2269 127 0 0 chr2 77277080 77277388 -175979195 + AluSx SINE Alu 1 308 -4 227 241 149 0 chr2 77277658 77277745 -175978838 + L2 LINE L2 3123 3222 -91 426 330 80 18 chr2 77278464 77278688 -175977895 + LTR67 LTR ERVL 252 489 -68 1770 163 24 3 chr2 77278793 77279081 -175977502 + AluJb SINE Alu 1 294 -18 2018 94 21 97 chr2 77280747 77281078 -175975505 + AluYb8 SINE Alu 1 306 -12 22 0 0 0 chr2 77281264 77281286 -175975297 + AT_rich Low_complexity Low_complexity 1 22 0 640 163 37 52 chr2 77283674 77283809 -175972774 - FLAM_C SINE Alu 0 133 1 3845 172 70 19 chr2 77283830 77284603 -175971980 + MER21B LTR ERV1 1 812 -51 22 35 0 0 chr2 77284729 77284758 -175971825 + AT_rich Low_complexity Low_complexity 1 29 0 2294 108 6 19 chr2 77284767 77285082 -175971501 + AluSx SINE Alu 1 311 -1 2252 86 31 0 chr2 77285375 77285665 -175970918 + AluSg SINE Alu 1 299 -11 1614 160 53 4 chr2 77286175 77286437 -175970146 - AluJb SINE Alu -20 292 18 1621 188 0 0 chr2 77286702 77286958 -175969625 - AluSx SINE Alu -30 282 27 554 237 7 44 chr2 77287074 77287209 -175969374 + FLAM_C SINE Alu 7 136 -7 2330 55 3 58 chr2 77287270 77287582 -175969001 + AluSg SINE Alu 1 295 -15 1797 105 0 4 chr2 77287711 77287949 -175968634 + AluSg/x SINE Alu 66 302 -8 2434 53 7 27 chr2 77288229 77288530 -175968053 + AluY SINE Alu 1 295 -16 1753 191 3 10 chr2 77288540 77288834 -175967749 + AluJb SINE Alu 1 292 -20 2131 135 3 6 chr2 77289066 77289378 -175967205 + AluSx SINE Alu 1 311 -1 418 290 133 46 chr2 77289771 77290221 -175966362 + L1ME LINE L1 3876 4286 -1860 1875 165 0 13 chr2 77290221 77290536 -175966047 + AluJo SINE Alu 1 311 -1 418 290 133 46 chr2 77290536 77291076 -175965507 + L1ME LINE L1 4286 4952 -1194 2310 123 3 0 chr2 77291104 77291412 -175965171 + AluSx SINE Alu 1 309 -3 376 249 86 33 chr2 77291634 77291854 -175964729 + L1ME LINE L1 5352 5589 -532 727 164 0 0 chr2 77291906 77292016 -175964567 + FLAM_C SINE Alu 2 111 -32 33 0 0 0 chr2 77292023 77292056 -175964527 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr2 77292828 77292849 -175963734 + AT_rich Low_complexity Low_complexity 1 21 0 1933 132 7 7 chr2 77293420 77293715 -175962868 + AluSx SINE Alu 1 295 -17 1648 93 51 21 chr2 77294129 77294365 -175962218 - AluSg SINE Alu -16 294 52 1793 169 14 7 chr2 77294722 77295012 -175961571 + AluJo SINE Alu 1 292 -20 1235 174 133 11 chr2 77295250 77295520 -175961063 + AluJo SINE Alu 1 303 -9 1933 167 118 14 chr2 77295751 77296087 -175960496 + Charlie1b DNA MER1_type 2 394 -2367 1929 131 27 3 chr2 77296087 77296384 -175960199 + AluSx SINE Alu 1 304 -8 1933 167 118 14 chr2 77296384 77296478 -175960105 + Charlie1b DNA MER1_type 394 477 -46 1088 55 0 8 chr2 77296578 77296706 -175959877 - AluSc SINE Alu -182 127 1 1862 119 38 0 chr2 77296750 77297011 -175959572 + AluSx SINE Alu 29 299 -13 1084 148 6 0 chr2 77297011 77297173 -175959410 + AluJo/FRAM SINE Alu 134 296 -16 2393 85 0 25 chr2 77297267 77297586 -175958997 + AluSx SINE Alu 1 311 -1 897 158 192 27 chr2 77297616 77297876 -175958707 + L1MC5 LINE L1 7611 7913 -48 2044 127 3 3 chr2 77297890 77298201 -175958382 + AluSx SINE Alu 1 311 0 2209 96 55 0 chr2 77299139 77299431 -175957152 + AluSx SINE Alu 1 308 -4 2419 83 3 16 chr2 77299443 77299756 -175956827 + AluSc SINE Alu 1 309 0 624 194 0 0 chr2 77299770 77299878 -175956705 + FLAM_C SINE Alu 1 108 -35 264 213 106 11 chr2 77300262 77300356 -175956227 + L1P LINE L1 5296 5398 -753 3158 122 95 0 chr2 77300430 77300912 -175955671 + MER1A DNA MER1_type 2 529 0 476 326 156 9 chr2 77300912 77301240 -175955343 + L1MC4a LINE L1 5498 5873 -1935 2244 98 34 0 chr2 77301420 77301540 -175955043 + AluSx SINE Alu 1 115 -197 261 0 0 0 chr2 77301540 77301569 -175955014 + (CA)n Simple_repeat Simple_repeat 2 30 0 2244 98 34 0 chr2 77301569 77301744 -175954839 + AluSx SINE Alu 115 306 -6 1578 138 58 10 chr2 77301795 77301929 -175954654 + L1M4 LINE L1 5186 5312 -872 2509 70 0 0 chr2 77301929 77302230 -175954353 + AluY SINE Alu 1 301 -10 1578 138 58 10 chr2 77302230 77302488 -175954095 + L1M4 LINE L1 5312 5755 -429 1525 74 0 15 chr2 77302518 77302720 -175953863 + AluSq SINE Alu 45 243 -70 695 110 0 0 chr2 77302721 77302821 -175953762 + AluSg/x SINE Alu 203 302 -8 28 71 0 0 chr2 77303105 77303161 -175953422 + AT_rich Low_complexity Low_complexity 1 56 0 22 35 0 0 chr2 77304074 77304103 -175952480 + GC_rich Low_complexity Low_complexity 1 29 0 286 165 15 135 chr2 77304599 77304693 -175951890 - L1MB7 LINE L1 0 6184 6109 1792 143 50 10 chr2 77304693 77304993 -175951590 - AluJo SINE Alu 0 312 1 286 165 15 135 chr2 77304993 77305031 -175951552 - L1MB7 LINE L1 -75 6109 6068 1170 132 12 0 chr2 77305032 77305199 -175951384 - AluSg/x SINE Alu -14 298 130 2078 125 0 16 chr2 77355226 77355529 -175901054 - AluJb SINE Alu -14 298 1 2415 93 0 6 chr2 77355689 77356001 -175900582 - AluSg SINE Alu 0 310 1 1784 167 20 3 chr2 77357976 77358282 -175898301 - AluSx SINE Alu -1 311 1 505 237 30 15 chr2 77358983 77359114 -175897469 + MIR SINE MIR 28 160 -102 200 314 87 34 chr2 77360129 77360336 -175896247 + L2 LINE L2 1682 1899 -1415 26 0 0 0 chr2 77362772 77362798 -175893785 + AT_rich Low_complexity Low_complexity 1 26 0 2399 93 3 0 chr2 77362826 77363127 -175893456 + AluSx SINE Alu 1 302 -10 1066 228 20 28 chr2 77363168 77363423 -175893160 + MIR SINE MIR 10 262 0 1288 165 21 141 chr2 77363460 77363794 -175892789 - AluYb8 SINE Alu -14 294 1 478 305 17 11 chr2 77364166 77364340 -175892243 + MER5B DNA MER1_type 1 175 -3 189 224 138 0 chr2 77364823 77364881 -175891702 + MIR SINE MIR 57 122 -86 288 0 0 0 chr2 77364898 77364930 -175891653 + (TG)n Simple_repeat Simple_repeat 2 33 0 506 257 8 0 chr2 77365889 77366054 -175890529 + L1ME1 LINE L1 6007 6184 0 734 307 94 39 chr2 77366388 77366685 -175889898 + L1ME4a LINE L1 4548 4827 -1294 1973 144 27 0 chr2 77366685 77366977 -175889606 - AluJb SINE Alu -12 300 1 734 307 94 39 chr2 77366977 77367889 -175888694 + L1ME4a LINE L1 4827 5825 -296 1692 137 52 11 chr2 77368122 77368392 -175888191 + AluSx SINE Alu 1 281 -31 398 259 65 7 chr2 77368413 77368598 -175887985 + MIR SINE MIR 20 260 -2 803 274 143 18 chr2 77368819 77369275 -175887308 - L1ME4a LINE L1 -253 5868 5356 2028 113 46 0 chr2 77369619 77369778 -175886805 - AluSq SINE Alu -17 296 117 320 0 25 0 chr2 77369778 77369818 -175886765 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 2028 113 46 0 chr2 77369818 77369941 -175886642 - AluSq SINE Alu -196 117 1 408 162 0 15 chr2 77370732 77370800 -175885783 - MER5B DNA MER1_type 0 178 112 2444 57 0 0 chr2 77370800 77371105 -175885478 + AluY SINE Alu 1 305 0 540 226 247 0 chr2 77371439 77371585 -175884998 - MER5A DNA MER1_type 0 189 8 427 325 13 26 chr2 77371739 77371893 -175884690 + MER5B DNA MER1_type 1 152 -26 1628 166 69 0 chr2 77372224 77372501 -175884082 + AluJo SINE Alu 1 296 -16 695 181 26 91 chr2 77372502 77372734 -175883849 + L1MC5 LINE L1 7701 7917 -44 602 233 39 8 chr2 77373409 77373538 -175883045 + MER5B DNA MER1_type 1 133 -45 1336 108 0 6 chr2 77374290 77374466 -175882117 + AluSx SINE Alu 1 175 -137 659 235 7 0 chr2 77374469 77374605 -175881978 - MIR SINE MIR -35 227 91 835 124 0 0 chr2 77374605 77374718 -175881865 + AluSx SINE Alu 175 287 -23 972 230 60 20 chr2 77376112 77376360 -175880223 - MIR SINE MIR -1 261 4 396 204 24 6 chr2 77376416 77376530 -175880053 + MER58B DNA MER1_type 3 118 -223 220 218 13 13 chr2 77376536 77376614 -175879969 + GA-rich Low_complexity Low_complexity 3 80 0 295 216 0 14 chr2 77376614 77376688 -175879895 + MER58B DNA MER1_type 269 341 0 2269 116 3 0 chr2 77377676 77377986 -175878597 + AluSx SINE Alu 1 311 -1 250 275 122 70 chr2 77378068 77378453 -175878130 + L1MC5 LINE L1 7521 7925 -36 1023 312 153 36 chr2 77379444 77380918 -175875665 + L2 LINE L2 1598 3271 -1 2440 87 0 7 chr2 77381094 77381393 -175875190 - AluSq SINE Alu -14 299 3 442 326 33 6 chr2 77383602 77383783 -175872800 + MIR SINE MIR 35 220 -42 638 192 0 26 chr2 77384116 77384240 -175872343 + MER106B DNA MER1_type 2 128 -931 1829 161 6 38 chr2 77384240 77384556 -175872027 - AluJo SINE Alu -6 306 1 638 192 0 26 chr2 77384556 77384567 -175872016 + MER106B DNA MER1_type 128 138 -921 2933 9 0 12 chr2 77384567 77384888 -175871695 - AluYb8 SINE Alu -1 317 1 638 192 0 26 chr2 77384888 77384902 -175871681 + MER106B DNA MER1_type 138 148 -911 222 152 0 22 chr2 77384910 77384956 -175871627 + (TTAAA)n Simple_repeat Simple_repeat 3 47 0 1109 207 0 22 chr2 77385451 77385683 -175870900 + AluJo SINE Alu 82 308 -4 1182 208 30 9 chr2 77385685 77385916 -175870667 - MER8 DNA MER2_type 0 239 4 264 246 0 16 chr2 77386910 77386971 -175869612 + CT-rich Low_complexity Low_complexity 4 63 0 621 259 278 19 chr2 77386975 77387345 -175869238 - L2 LINE L2 -25 3288 2823 200 307 11 23 chr2 77387357 77387445 -175869138 + L2 LINE L2 2411 2497 -817 220 354 100 10 chr2 77388156 77388447 -175868136 + L2 LINE L2 1565 1881 -1433 759 258 73 8 chr2 77388454 77388702 -175867881 + Charlie8 DNA MER1_type 1 264 -2153 657 332 102 27 chr2 77388910 77389569 -175867014 + L2 LINE L2 2015 2722 -592 1974 174 0 0 chr2 77389720 77390025 -175866558 - AluJb SINE Alu -7 305 1 21 0 0 0 chr2 77390277 77390298 -175866285 + AT_rich Low_complexity Low_complexity 1 21 0 327 341 97 23 chr2 77390298 77390556 -175866027 + L2 LINE L2 2701 2977 -337 207 290 21 32 chr2 77390803 77390896 -175865687 + GA-rich Low_complexity Low_complexity 1 92 0 534 87 29 0 chr2 77390996 77391099 -175865484 + (GA)n Simple_repeat Simple_repeat 1 106 0 425 266 0 0 chr2 77391799 77391893 -175864690 - MIR3 SINE MIR -1 207 114 788 178 0 7 chr2 77392042 77392177 -175864406 - FLAM_C SINE Alu -8 135 2 668 239 53 49 chr2 77392406 77392632 -175863951 + MIR SINE MIR 36 262 0 286 316 97 18 chr2 77393274 77393388 -175863195 + L2 LINE L2 3150 3272 0 2021 124 27 10 chr2 77395080 77395379 -175861204 - AluSx SINE Alu -8 304 1 2235 128 0 0 chr2 77395760 77396072 -175860511 + AluSx SINE Alu 1 312 0 204 200 55 0 chr2 77396743 77396798 -175859785 + CT-rich Low_complexity Low_complexity 3 60 0 2178 88 9 82 chr2 77396889 77397219 -175859364 + AluSx SINE Alu 1 306 -6 181 315 0 54 chr2 77397648 77397740 -175858843 - MIR SINE MIR -6 256 170 435 212 0 71 chr2 77397759 77397858 -175858725 - MER81 DNA DNA -21 93 2 300 219 49 0 chr2 77398474 77398556 -175858027 + MIR SINE MIR 107 192 -70 5768 138 51 32 chr2 77398567 77399173 -175857410 + L1MA9 LINE L1 4726 5319 -993 625 203 42 0 chr2 77399173 77399291 -175857292 + FLAM_A SINE Alu 1 123 -10 5768 138 51 32 chr2 77399291 77399331 -175857252 + L1MA9 LINE L1 5319 5357 -955 2607 103 8 16 chr2 77399331 77399478 -175857105 + THE1B LTR MaLR 1 148 -216 2343 98 0 0 chr2 77399478 77399774 -175856809 + AluSp SINE Alu 2 297 -16 2607 103 8 16 chr2 77399774 77399993 -175856590 + THE1B LTR MaLR 148 364 0 5768 138 51 32 chr2 77399993 77400900 -175855683 + L1MA9 LINE L1 5357 6311 -1 242 276 26 13 chr2 77400932 77401008 -175855575 + L2 LINE L2 2970 3046 -226 2250 108 0 0 chr2 77402743 77403030 -175853553 + AluSx SINE Alu 1 287 -25 610 124 16 0 chr2 77403425 77403546 -175853037 + (TG)n Simple_repeat Simple_repeat 2 124 0 2826 7 0 0 chr2 77404260 77404557 -175852026 - AluYa5 SINE Alu -14 297 1 2428 154 35 50 chr2 77405753 77406121 -175850462 - L1MC2 LINE L1 0 6624 6252 2410 100 0 3 chr2 77406121 77406432 -175850151 - AluSg SINE Alu 0 310 1 2428 154 35 50 chr2 77406432 77406497 -175850086 - L1MC2 LINE L1 -372 6252 6188 3184 95 52 7 chr2 77406497 77406962 -175849621 + LTR19A LTR ERV1 1 486 0 2428 154 35 50 chr2 77406962 77407066 -175849517 - L1MC2 LINE L1 -436 6188 6094 12390 214 24 28 chr2 77408460 77409327 -175847256 - L1MC2 LINE L1 -512 6112 5243 1850 163 7 20 chr2 77409327 77409627 -175846956 - AluJo SINE Alu -16 296 1 12390 214 24 28 chr2 77409627 77410065 -175846518 - L1MC2 LINE L1 -1381 5243 4805 2411 69 0 23 chr2 77410065 77410370 -175846213 - AluY SINE Alu -13 298 1 12390 214 24 28 chr2 77410370 77412638 -175843945 - L1MC2 LINE L1 -1819 4805 2529 348 83 0 0 chr2 77412638 77412686 -175843897 + (TG)n Simple_repeat Simple_repeat 1 48 0 12390 214 24 28 chr2 77412686 77412709 -175843874 - L1MC2 LINE L1 -4095 2529 2507 1549 148 4 0 chr2 77412709 77412938 -175843645 - AluSx SINE Alu -82 230 1 12390 214 24 28 chr2 77412938 77413059 -175843524 - L1MC2 LINE L1 -4117 2507 2387 2003 155 3 0 chr2 77413059 77413356 -175843227 + AluSx SINE Alu 1 298 -14 12390 214 24 28 chr2 77413356 77413459 -175843124 - L1MC2 LINE L1 -4237 2387 2285 815 188 0 0 chr2 77413459 77413592 -175842991 - FLAM_A SINE Alu 0 133 1 12390 214 24 28 chr2 77413592 77413757 -175842826 - L1MC2 LINE L1 -4339 2285 2147 336 229 221 28 chr2 77415449 77415568 -175841015 + L1M4 LINE L1 2464 2559 -3587 2176 137 0 0 chr2 77415568 77415874 -175840709 + AluSx SINE Alu 3 308 -4 336 229 221 28 chr2 77415874 77416003 -175840580 + L1M4 LINE L1 2559 2760 -3386 27 29 0 0 chr2 77416010 77416044 -175840539 + AT_rich Low_complexity Low_complexity 1 34 0 875 184 18 24 chr2 77416058 77416226 -175840357 + FRAM SINE Alu 1 167 -9 579 201 82 0 chr2 77416369 77416503 -175840080 - MIR SINE MIR -26 236 92 233 191 0 0 chr2 77416673 77416715 -175839868 + L1MC5 LINE L1 7816 7857 -104 243 0 0 0 chr2 77416730 77416757 -175839826 + (A)n Simple_repeat Simple_repeat 1 27 0 5906 141 10 3 chr2 77416761 77417678 -175838905 + MER49 LTR ERV1 1 923 0 330 252 187 75 chr2 77417889 77418183 -175838400 + HAL1 LINE L1 326 652 -1855 284 247 180 50 chr2 77418191 77418430 -175838153 + HAL1 LINE L1 699 968 -1539 5663 114 21 23 chr2 77418435 77418811 -175837772 + L1PB4 LINE L1 5109 5484 -672 2197 105 10 3 chr2 77418811 77419107 -175837476 + AluSx SINE Alu 1 298 -14 5663 114 21 23 chr2 77419107 77419768 -175836815 + L1PB4 LINE L1 5484 6144 -12 429 176 54 0 chr2 77419807 77419881 -175836702 + U6 snRNA snRNA 1 78 -29 878 102 44 29 chr2 77419924 77420061 -175836522 - MER73 LTR ERVL 0 644 506 1379 162 90 19 chr2 77420067 77420333 -175836250 - MER73 LTR ERVL -344 300 16 2661 235 72 40 chr2 77420333 77421266 -175835317 + HAL1 LINE L1 985 1947 -560 423 167 71 0 chr2 77421307 77421391 -175835192 + HAL1 LINE L1 2075 2164 -343 627 108 77 23 chr2 77421823 77421953 -175834630 + MER53 DNA DNA 1 137 -52 261 213 16 16 chr2 77422050 77422111 -175834472 - MLT1L LTR MaLR -554 61 1 1145 277 88 41 chr2 77422111 77422677 -175833906 + MLT1L LTR MaLR 23 615 0 351 296 99 0 chr2 77422678 77422820 -175833763 + L1ME3A LINE L1 5793 5948 -222 25 31 0 0 chr2 77423065 77423097 -175833486 + AT_rich Low_complexity Low_complexity 1 32 0 1020 251 109 70 chr2 77423097 77423365 -175833218 + HAL1 LINE L1 1285 1541 -966 2196 110 3 3 chr2 77423365 77423655 -175832928 + AluSx SINE Alu 1 290 -22 1020 251 109 70 chr2 77423655 77423947 -175832636 + HAL1 LINE L1 1541 1867 -640 310 230 15 82 chr2 77424323 77424458 -175832125 + HAL1 LINE L1 2353 2478 -29 302 89 22 0 chr2 77424622 77424667 -175831916 - MER5A DNA MER1_type 0 189 144 864 192 0 0 chr2 77424669 77424820 -175831763 - FRAM SINE Alu -12 164 14 770 196 27 0 chr2 77424824 77424972 -175831611 - MER5A DNA MER1_type -36 153 2 22 0 0 0 chr2 77424992 77425014 -175831569 + AT_rich Low_complexity Low_complexity 1 22 0 481 271 118 26 chr2 77425148 77425536 -175831047 + MLT1K LTR MaLR 129 585 -3 461 297 38 1 chr2 77426057 77426236 -175830347 - MIR SINE MIR -50 212 30 396 113 0 78 chr2 77426254 77426369 -175830214 + (GGGAA)n Simple_repeat Simple_repeat 2 107 0 27 0 0 0 chr2 77426544 77426571 -175830012 + AT_rich Low_complexity Low_complexity 1 27 0 1925 104 0 0 chr2 77426947 77427196 -175829387 + AluSg SINE Alu 1 249 -61 261 241 89 25 chr2 77427439 77427518 -175829065 - L2 LINE L2 -4 3309 3226 324 250 26 69 chr2 77428946 77429062 -175827521 - MIR3 SINE MIR -16 192 82 2183 100 4 0 chr2 77429716 77430026 -175826557 + AluSx SINE Alu 1 311 0 215 213 38 66 chr2 77430340 77430523 -175826060 + (AGGTG)n Simple_repeat Simple_repeat 1 178 0 * 220 241 38 30 chr2 77430413 77430546 -175826037 + (GTGTG)n Simple_repeat Simple_repeat 5 138 0 * 241 214 17 87 chr2 77430505 77430678 -175825905 + (ATGGTG)n Simple_repeat Simple_repeat 6 166 0 297 185 45 45 chr2 77430693 77430871 -175825712 + (GTGTG)n Simple_repeat Simple_repeat 3 180 0 284 275 35 12 chr2 77430878 77431049 -175825534 + (TGG)n Simple_repeat Simple_repeat 2 176 0 240 139 72 60 chr2 77430966 77431132 -175825451 + (AGGTG)n Simple_repeat Simple_repeat 2 169 0 * 265 182 42 49 chr2 77431247 77431390 -175825193 + (GTGTG)n Simple_repeat Simple_repeat 4 145 0 * 285 268 29 29 chr2 77431353 77431783 -175824800 + (TGG)n Simple_repeat Simple_repeat 1 430 0 207 271 0 17 chr2 77432646 77432705 -175823878 + MIR3 SINE MIR 147 204 -4 291 114 0 0 chr2 77433112 77433156 -175823427 + (TG)n Simple_repeat Simple_repeat 1 44 0 775 187 68 68 chr2 77433473 77433692 -175822891 + MER20 DNA MER1_type 1 219 0 1121 209 128 3 chr2 77433808 77434114 -175822469 - MER2 DNA MER2_type 0 344 1 846 261 174 8 chr2 77434732 77435089 -175821494 + L2 LINE L2 2862 3277 -36 365 262 171 18 chr2 77435091 77435255 -175821328 + MIR SINE MIR 45 233 -29 23 0 0 0 chr2 77435273 77435296 -175821287 + AT_rich Low_complexity Low_complexity 1 23 0 349 185 49 0 chr2 77435514 77435595 -175820988 - MIR SINE MIR -92 170 86 355 247 0 0 chr2 77436376 77436465 -175820118 - MIR SINE MIR -13 249 161 1951 148 3 10 chr2 77436472 77436777 -175819806 - AluJb SINE Alu -9 303 1 564 224 61 0 chr2 77436839 77436986 -175819597 + MIR SINE MIR 86 241 -21 433 200 11 11 chr2 77436986 77437081 -175819502 - MIR SINE MIR -99 163 69 452 274 8 0 chr2 77438164 77438281 -175818302 - MER94 DNA DNA -15 119 2 438 289 74 26 chr2 77438754 77438944 -175817639 + L1MC4a LINE L1 5414 5612 -2196 2028 138 23 7 chr2 77438945 77439249 -175817334 + AluSx SINE Alu 1 309 -3 342 265 49 0 chr2 77439360 77439462 -175817121 + MIR SINE MIR 155 261 -1 392 239 16 98 chr2 77439468 77439652 -175816931 + L1MC4a LINE L1 5704 5872 -1936 1306 78 0 0 chr2 77439652 77439818 -175816765 + L1PA11 LINE L1 6007 6172 -2 21 36 0 0 chr2 77439825 77439853 -175816730 + AT_rich Low_complexity Low_complexity 1 28 0 3169 140 30 9 chr2 77440089 77440625 -175815958 + L1MB3 LINE L1 5628 6174 -9 2331 100 3 3 chr2 77441431 77441732 -175814851 + AluSx SINE Alu 1 301 -11 283 288 42 42 chr2 77441877 77441995 -175814588 + L2 LINE L2 3151 3268 -4 254 257 129 20 chr2 77442083 77442184 -175814399 + HUERS-P1 LTR ERV1 456 567 -5696 396 287 10 0 chr2 77444997 77445098 -175811485 - MER81 DNA DNA 0 114 13 224 125 0 54 chr2 77446353 77446409 -175810174 + (T)n Simple_repeat Simple_repeat 1 53 0 2154 131 0 3 chr2 77446608 77446929 -175809654 - AluSx SINE Alu 0 312 1 893 157 0 0 chr2 77446976 77447110 -175809473 - FRAM SINE Alu -8 168 35 434 269 90 112 chr2 77447205 77447473 -175809110 - L1M4 LINE L1 -990 5156 4895 417 262 36 2 chr2 77447825 77447968 -175808615 - L1M4 LINE L1 -491 5683 5526 509 270 62 27 chr2 77448368 77448608 -175807975 + L1ME LINE L1 5518 5769 -401 2280 99 3 7 chr2 77448797 77449099 -175807484 + AluSg SINE Alu 1 301 -9 24 0 0 0 chr2 77449193 77449217 -175807366 + AT_rich Low_complexity Low_complexity 1 24 0 185 275 125 25 chr2 77450032 77450112 -175806471 + MER5B DNA MER1_type 91 178 0 319 254 56 0 chr2 77450039 77450110 -175806473 - MER5A DNA MER1_type -98 91 17 441 195 161 13 chr2 77450112 77450261 -175806322 + L1MC5 LINE L1 7330 7500 -461 363 200 14 0 chr2 77450265 77450335 -175806248 + FAM SINE Alu 104 174 -1 936 199 36 0 chr2 77450926 77451092 -175805491 + FAM SINE Alu 1 172 -3 213 39 0 0 chr2 77451092 77451118 -175805465 + (ATG)n Simple_repeat Simple_repeat 3 28 0 2443 98 0 0 chr2 77452411 77452718 -175803865 - AluY SINE Alu -4 307 1 1858 153 10 23 chr2 77452726 77453034 -175803549 - AluSx SINE Alu -8 304 1 2334 83 0 7 chr2 77453479 77453779 -175802804 - AluY SINE Alu -13 298 1 2125 136 24 30 chr2 77454841 77455180 -175801403 - MER1B DNA MER1_type 0 337 1 2498 97 0 0 chr2 77455384 77455694 -175800889 - AluSg SINE Alu 0 310 1 701 208 136 67 chr2 77456032 77456422 -175800161 + L1MC5 LINE L1 7512 7928 -33 2570 59 3 3 chr2 77457147 77457451 -175799132 - AluSc SINE Alu -5 304 1 333 257 83 9 chr2 77457643 77457752 -175798831 - MIR SINE MIR -96 166 50 195 286 175 8 chr2 77458120 77458246 -175798337 + L2 LINE L2 1820 1966 -1348 470 270 20 54 chr2 77458911 77459115 -175797468 + L2 LINE L2 2182 2378 -936 490 256 98 18 chr2 77459280 77459444 -175797139 - MIR SINE MIR -27 235 59 463 340 201 19 chr2 77459842 77460260 -175796323 - L2 LINE L2 -560 2754 2261 502 147 233 0 chr2 77460509 77460638 -175795945 + MER105 DNA DNA 2 160 -44 229 290 45 52 chr2 77460949 77461109 -175795474 + MER5A DNA MER1_type 8 182 -7 384 297 182 18 chr2 77468785 77469115 -175787468 + L2 LINE L2 2921 3304 -9 2370 86 7 10 chr2 77469943 77470245 -175786338 + AluSc SINE Alu 1 301 -8 304 306 24 18 chr2 77472224 77472394 -175784189 + GA-rich Low_complexity Low_complexity 2 172 0 316 235 15 0 chr2 77481453 77481521 -175775062 + L1ME4a LINE L1 6047 6115 -6 932 286 50 0 chr2 77482055 77482296 -175774287 + MIR SINE MIR 5 257 -5 290 319 60 26 chr2 77482361 77482477 -175774106 - MIR SINE MIR -129 133 14 2063 136 20 3 chr2 77482726 77483021 -175773562 + AluSx SINE Alu 1 300 -12 2853 22 0 9 chr2 77483199 77483520 -175773063 + AluYb8 SINE Alu 1 318 0 532 252 116 0 chr2 77484172 77484327 -175772256 + MIR SINE MIR 89 261 -1 232 250 0 0 chr2 77484393 77484441 -175772142 + (TGAA)n Simple_repeat Simple_repeat 2 49 0 348 239 42 56 chr2 77484590 77484732 -175771851 - MIR SINE MIR -58 204 65 710 218 51 0 chr2 77486727 77486883 -175769700 + MIR SINE MIR 99 262 0 641 293 209 55 chr2 77487009 77488310 -175768273 + L2 LINE L2 1318 2819 -495 1548 162 32 67 chr2 77488312 77488627 -175767956 + AluSx SINE Alu 1 304 -8 939 149 25 12 chr2 77488649 77488810 -175767773 + FAM SINE Alu 1 46 -3 464 323 95 49 chr2 77488934 77489197 -175767386 + L2 LINE L2 2995 3269 -3 311 310 103 26 chr2 77490080 77490235 -175766348 + MIR SINE MIR 66 232 -30 501 303 76 49 chr2 77490630 77490934 -175765649 + L3 LINE CR1 1221 1532 -45 332 274 207 12 chr2 77490930 77491094 -175765489 - MIR3 SINE MIR -6 202 7 * 449 111 0 0 chr2 77491091 77491154 -175765429 + MER5A DNA MER1_type 9 71 -118 325 223 21 32 chr2 77491335 77491429 -175765154 - MER103 DNA DNA -16 150 58 206 344 122 22 chr2 77491677 77491767 -175764816 + L3b LINE CR1 1461 1559 -24 250 329 14 21 chr2 77492606 77492746 -175763837 + L1ME LINE L1 5414 5552 -614 1787 148 0 60 chr2 77492792 77493109 -175763474 - AluJb SINE Alu -11 301 4 699 221 35 35 chr2 77493109 77493281 -175763302 + MIR SINE MIR 47 218 -44 893 248 150 30 chr2 77493437 77493965 -175762618 - L1MC4a LINE L1 -1635 6173 5583 885 119 49 0 chr2 77494038 77494181 -175762402 - L1MB3 LINE L1 -2 6181 6032 984 126 80 0 chr2 77494285 77494460 -175762123 - MER2 DNA MER2_type -25 320 132 2427 127 8 0 chr2 77494461 77494830 -175761753 - MER1A DNA MER1_type -1 528 157 502 191 183 0 chr2 77494834 77494949 -175761634 - MER2 DNA MER2_type -209 136 1 1618 113 21 21 chr2 77494999 77495237 -175761346 + AluSx SINE Alu 61 298 -14 1597 175 25 15 chr2 77495905 77496179 -175760404 - AluJb SINE Alu -23 289 13 316 134 12 37 chr2 77496191 77496273 -175760310 - Charlie5 DNA MER1_type -6 2606 2527 1422 174 0 0 chr2 77496273 77496485 -175760098 - AluJb SINE Alu -17 295 84 1196 151 35 61 chr2 77496485 77496716 -175759867 - Charlie5 DNA MER1_type -90 2534 2299 273 119 0 0 chr2 77496716 77496758 -175759825 + (TTCA)n Simple_repeat Simple_repeat 4 45 0 590 214 17 0 chr2 77496759 77496876 -175759707 - FLAM_C SINE Alu -14 119 1 1196 151 35 61 chr2 77496876 77496953 -175759630 - Charlie5 DNA MER1_type -324 2300 2232 695 164 0 8 chr2 77496963 77497091 -175759492 - MER3 DNA MER1_type -41 168 42 596 280 77 81 chr2 77497529 77497708 -175758875 + L1M4 LINE L1 4062 4240 -1906 2299 106 0 13 chr2 77497708 77498009 -175758574 + AluSx SINE Alu 1 297 -15 596 280 77 81 chr2 77498009 77498190 -175758393 + L1M4 LINE L1 4240 4420 -1726 2366 93 0 0 chr2 77498190 77498479 -175758104 + AluSg SINE Alu 1 289 -21 2317 90 24 0 chr2 77498487 77498776 -175757807 + AluSx SINE Alu 1 296 -16 596 280 77 81 chr2 77498776 77498849 -175757734 + L1M4 LINE L1 4427 4499 -1647 1884 144 25 0 chr2 77498849 77499127 -175757456 + AluSx SINE Alu 12 296 -16 596 280 77 81 chr2 77499127 77499343 -175757240 + L1M4 LINE L1 4499 4714 -1432 1676 75 5 0 chr2 77499343 77499544 -175757039 + AluY SINE Alu 91 292 -19 596 280 77 81 chr2 77499544 77499669 -175756914 + L1M4 LINE L1 4714 4846 -1300 1632 190 13 29 chr2 77499669 77499979 -175756604 - AluJo SINE Alu -7 305 1 596 280 77 81 chr2 77499979 77500079 -175756504 + L1M4 LINE L1 4846 4945 -1201 183 259 0 0 chr2 77500081 77500139 -175756444 + GA-rich Low_complexity Low_complexity 3 60 0 239 289 22 22 chr2 77500150 77500240 -175756343 + L1MEd LINE L1 5 94 -6025 2576 146 16 12 chr2 77500293 77500719 -175755864 + LTR42 LTR ERVL 68 495 0 279 71 0 0 chr2 77500721 77500763 -175755820 + (CA)n Simple_repeat Simple_repeat 1 42 0 662 205 8 0 chr2 77500941 77501058 -175755525 + FLAM_C SINE Alu 2 119 -24 198 0 0 0 chr2 77501291 77501313 -175755270 + (TA)n Simple_repeat Simple_repeat 2 23 0 706 317 81 71 chr2 77501325 77501696 -175754887 + L1MEd LINE L1 537 916 -5203 2309 113 0 0 chr2 77501696 77501988 -175754595 + AluSq SINE Alu 1 292 -21 706 317 81 71 chr2 77501988 77502096 -175754487 + L1MEd LINE L1 916 1021 -5098 302 255 0 10 chr2 77502199 77502297 -175754286 + L1MEd LINE L1 1052 1148 -4971 1087 164 0 0 chr2 77502306 77502471 -175754112 + FRAM SINE Alu 2 166 -10 744 253 30 152 chr2 77502507 77502843 -175753740 + L1MEd LINE L1 1172 1547 -4763 2368 82 0 0 chr2 77502843 77503124 -175753459 + AluSq SINE Alu 11 291 -22 2325 60 50 3 chr2 77503124 77503423 -175753160 + AluSp SINE Alu 1 313 0 744 253 30 152 chr2 77503125 77503471 -175753112 + L1MEd LINE L1 1547 1486 -4824 2331 54 11 0 chr2 77503471 77503590 -175752993 + AluY SINE Alu 1 117 -199 183 42 0 0 chr2 77503590 77503614 -175752969 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2331 54 11 0 chr2 77503614 77503807 -175752776 + AluY SINE Alu 117 316 0 744 253 30 152 chr2 77503807 77503919 -175752664 + L1MEd LINE L1 1485 1609 -4701 313 169 17 0 chr2 77503919 77503978 -175752605 - MLT1E1 LTR MaLR 0 624 565 720 172 8 15 chr2 77503980 77504114 -175752469 + AluJo SINE Alu 1 133 -169 981 151 11 38 chr2 77504144 77504330 -175752253 + AluJo SINE Alu 118 298 -14 2652 194 92 4 chr2 77504342 77504898 -175751685 - MLT1E1 LTR MaLR -49 605 1 1951 147 7 0 chr2 77504933 77505212 -175751371 - AluJb SINE Alu -31 281 1 328 284 146 59 chr2 77505214 77505371 -175751212 + L1MEd LINE L1 1617 1759 -4551 2243 80 10 40 chr2 77505371 77505695 -175750888 + AluSp SINE Alu 1 315 0 328 284 146 59 chr2 77505695 77505857 -175750726 + L1MEd LINE L1 1759 1965 -4345 1383 64 0 17 chr2 77505857 77506030 -175750553 + AluSg/x SINE Alu 127 296 -14 397 288 55 0 chr2 77506128 77506274 -175750309 + L1MEd LINE L1 3684 3837 -2292 556 258 185 24 chr2 77506279 77506436 -175750147 + L1MEd LINE L1 4135 4265 -1864 3683 104 45 0 chr2 77506436 77507012 -175749571 + LTR43 LTR ERV1 1 602 0 556 258 185 24 chr2 77507012 77507252 -175749331 + L1MEd LINE L1 4265 4616 -1513 432 0 0 0 chr2 77507252 77507300 -175749283 + (TG)n Simple_repeat Simple_repeat 1 48 0 556 258 185 24 chr2 77507300 77507355 -175749228 + L1MEd LINE L1 4616 4661 -1468 1896 168 0 10 chr2 77507731 77508040 -175748543 - AluJb SINE Alu -6 306 1 322 320 0 0 chr2 77509688 77509766 -175746817 - L2 LINE L2 0 3272 3195 22 0 0 0 chr2 77509868 77509890 -175746693 + AT_rich Low_complexity Low_complexity 1 22 0 1680 131 58 76 chr2 77509968 77510174 -175746409 - THE1C LTR MaLR 0 375 178 2635 51 0 16 chr2 77510174 77510490 -175746093 - AluY SINE Alu 0 311 1 1680 131 58 76 chr2 77510490 77510665 -175745918 - THE1C LTR MaLR -197 178 1 2195 99 0 49 chr2 77510690 77511014 -175745569 + AluSq SINE Alu 1 308 -5 29 28 0 0 chr2 77511170 77511206 -175745377 + AT_rich Low_complexity Low_complexity 1 36 0 409 362 27 27 chr2 77511437 77511625 -175744958 - L2 LINE L2 -214 3058 2871 2446 94 3 0 chr2 77511679 77511977 -175744606 - AluSp SINE Alu -14 299 1 27 0 0 0 chr2 77512488 77512515 -175744068 + AT_rich Low_complexity Low_complexity 1 27 0 302 241 25 13 chr2 77514078 77514157 -175742426 + MER96 DNA MER1_type? 1 80 -95 999 88 0 0 chr2 77516868 77517004 -175739579 + AluSc SINE Alu 174 309 0 333 213 0 32 chr2 77518397 77518491 -175738092 + G-rich Low_complexity Low_complexity 6 96 0 213 313 0 62 chr2 77519149 77519229 -175737354 - MIR SINE MIR -159 103 29 2498 86 0 6 chr2 77519307 77519621 -175736962 + AluSx SINE Alu 1 312 0 587 192 0 0 chr2 77519638 77519742 -175736841 + FLAM_A SINE Alu 1 104 -38 551 268 50 53 chr2 77519941 77520171 -175736412 + L1ME4a LINE L1 5581 5811 -310 1931 105 91 11 chr2 77520171 77520457 -175736126 - AluSx SINE Alu -3 309 1 551 268 50 53 chr2 77520457 77520566 -175736017 + L1ME4a LINE L1 5811 5919 -202 2314 87 10 7 chr2 77521181 77521490 -175735093 - AluSx SINE Alu -2 310 1 2363 79 16 10 chr2 77522922 77523227 -175733356 + AluSx SINE Alu 2 308 -4 423 214 56 16 chr2 77523525 77523651 -175732932 + MIR SINE MIR 66 196 -66 356 278 22 0 chr2 77524432 77524522 -175732061 + MIR SINE MIR 33 124 -84 270 200 18 0 chr2 77524602 77524657 -175731926 + MIR3 SINE MIR 135 190 -18 236 321 143 42 chr2 77524665 77524902 -175731681 + L2 LINE L2 2977 3237 -35 243 314 68 23 chr2 77524923 77525098 -175731485 + MIR SINE MIR 34 212 -50 576 297 86 5 chr2 77529480 77529702 -175726881 - MIR SINE MIR -2 260 21 955 87 0 0 chr2 77529851 77529978 -175726605 + FLAM_C SINE Alu 1 127 -6 183 239 43 0 chr2 77533208 77533254 -175723329 + MER5B DNA MER1_type 1 48 -130 580 107 0 0 chr2 77533278 77533362 -175723221 + FLAM_A SINE Alu 40 123 -19 2514 58 0 0 chr2 77533370 77533665 -175722918 + AluY SINE Alu 1 295 -16 582 299 67 42 chr2 77533700 77533900 -175722683 + L1MC4a LINE L1 5515 5709 -2099 2525 57 0 17 chr2 77533900 77534201 -175722382 - AluY SINE Alu -15 296 1 582 299 67 42 chr2 77534201 77534404 -175722179 + L1MC4a LINE L1 5709 5928 -1880 213 178 0 0 chr2 77534404 77534449 -175722134 + (TA)n Simple_repeat Simple_repeat 2 46 0 2200 107 3 17 chr2 77534517 77534679 -175721904 - AluSx SINE Alu -18 294 136 2402 100 3 0 chr2 77534679 77534988 -175721595 - AluSx SINE Alu -2 310 1 2200 107 3 17 chr2 77534988 77535123 -175721460 - AluSx SINE Alu -176 136 1 436 252 108 7 chr2 77535179 77535318 -175721265 + MER5B DNA MER1_type 24 176 -2 497 250 91 0 chr2 77535670 77535802 -175720781 + MIR SINE MIR 92 235 -27 182 228 70 0 chr2 77537586 77537643 -175718940 + MIR SINE MIR 132 192 -70 466 143 335 37 chr2 77537979 77538140 -175718443 + MER3 DNA MER1_type 1 209 0 336 299 0 0 chr2 77538376 77538463 -175718120 + MER117 DNA MER1_type 74 160 -37 862 269 154 50 chr2 77538585 77539403 -175717180 + L2 LINE L2 2386 3307 -6 678 168 72 0 chr2 77539415 77539540 -175717043 + FLAM_C SINE Alu 6 139 -4 605 255 25 56 chr2 77542859 77543055 -175713528 + MIR SINE MIR 57 246 -16 2198 107 0 0 chr2 77543073 77543363 -175713220 + AluSp SINE Alu 1 290 -23 1212 153 169 8 chr2 77543366 77543487 -175713096 + AluJb SINE Alu 1 101 -201 240 35 0 0 chr2 77543487 77543516 -175713067 + (CA)n Simple_repeat Simple_repeat 2 30 0 1212 153 169 8 chr2 77543516 77543643 -175712940 + AluJb SINE Alu 101 289 -13 2183 112 10 13 chr2 77543662 77543992 -175712591 - AluSx SINE Alu 0 312 1 378 260 20 30 chr2 77543992 77544093 -175712490 + L1MC4 LINE L1 6548 6702 -1139 2348 61 0 4 chr2 77544181 77544490 -175712093 + AluY SINE Alu 2 309 0 846 264 85 105 chr2 77544729 77545281 -175711302 - MLT1K LTR MaLR -36 552 12 268 243 213 37 chr2 77545419 77545555 -175711028 + L2 LINE L2 3153 3312 -1 207 24 49 24 chr2 77545940 77545981 -175710602 + (TTATA)n Simple_repeat Simple_repeat 5 46 0 1517 159 48 4 chr2 77545984 77546235 -175710348 - AluJo SINE Alu -41 271 10 2422 91 0 0 chr2 77546405 77546712 -175709871 - AluSg SINE Alu -3 307 1 22 56 0 0 chr2 77546716 77546752 -175709831 + AT_rich Low_complexity Low_complexity 1 36 0 1547 180 62 74 chr2 77546901 77546996 -175709587 - MER63B DNA MER1_type -633 429 334 1898 115 93 0 chr2 77546996 77547265 -175709318 + AluSg SINE Alu 1 294 -16 2130 96 10 0 chr2 77547274 77547566 -175709017 + AluSq SINE Alu 1 295 -18 1547 180 62 74 chr2 77547566 77547894 -175708689 - MER63B DNA MER1_type -736 326 1 2105 118 0 7 chr2 77548488 77548785 -175707798 + AluSx SINE Alu 7 301 -11 2136 106 0 10 chr2 77548785 77549078 -175707505 + AluSc SINE Alu 1 290 -19 778 170 95 27 chr2 77549086 77549233 -175707350 + FRAM SINE Alu 1 152 -24 2950 202 49 70 chr2 77549233 77549691 -175706892 + L1MC4 LINE L1 6990 7456 -586 1032 98 0 0 chr2 77549691 77549824 -175706759 + FLAM_C SINE Alu 1 133 0 2950 202 49 70 chr2 77549824 77549876 -175706707 + L1MC4 LINE L1 7456 7508 -534 1831 151 3 3 chr2 77549876 77550160 -175706423 + AluSx SINE Alu 1 284 -28 2950 202 49 70 chr2 77550160 77550383 -175706200 + L1MC4 LINE L1 7508 7734 -308 2000 88 67 0 chr2 77550383 77550667 -175705916 + AluSp SINE Alu 1 303 -10 2082 131 0 0 chr2 77550670 77550968 -175705615 + AluSg1 SINE Alu 1 298 -11 2950 202 49 70 chr2 77550968 77551159 -175705424 + L1MC4 LINE L1 7736 7901 -141 2655 113 73 68 chr2 77551165 77551472 -175705111 + MER4B LTR ERV1 1 305 -474 2067 127 0 0 chr2 77551472 77551772 -175704811 - AluSq SINE Alu -13 300 1 2655 113 73 68 chr2 77551772 77552068 -175704515 + MER4B LTR ERV1 305 779 0 2372 73 0 0 chr2 77552116 77552416 -175704167 + AluY SINE Alu 2 301 -10 1790 141 0 71 chr2 77552504 77552830 -175703753 + AluJb SINE Alu 1 303 -9 254 146 73 0 chr2 77552840 77552895 -175703688 + L1MC4 LINE L1 7981 8039 -3 538 273 20 21 chr2 77553061 77553252 -175703331 + MIR SINE MIR 17 207 -55 331 333 136 20 chr2 77553501 77553795 -175702788 + L2 LINE L2 2133 2460 -854 548 309 28 44 chr2 77553817 77554069 -175702514 - MIR SINE MIR -10 252 5 382 274 206 0 chr2 77554202 77554377 -175702206 - L1ME4a LINE L1 -1 6120 5910 1682 51 4 55 chr2 77554388 77554625 -175701958 - AluSc SINE Alu -2 307 83 225 216 270 0 chr2 77554838 77554912 -175701671 - L1ME4a LINE L1 -347 5827 5734 331 303 37 18 chr2 77554925 77555034 -175701549 - L1ME4a LINE L1 -273 5848 5738 297 346 24 16 chr2 77555118 77555245 -175701338 + L2 LINE L2 3143 3270 -2 620 272 166 71 chr2 77556697 77557065 -175699518 - L2 LINE L2 -1 3312 2910 767 290 80 7 chr2 77557086 77557386 -175699197 - L2 LINE L2 -561 2753 2432 24 91 0 0 chr2 77557949 77558015 -175698568 + GC_rich Low_complexity Low_complexity 1 66 0 351 315 50 11 chr2 77559768 77559949 -175696634 - L3 LINE CR1 -185 1392 1205 2543 43 0 0 chr2 77564066 77564371 -175692212 - AluY SINE Alu -6 305 1 2301 74 3 0 chr2 77564371 77564667 -175691916 - AluSp SINE Alu -15 298 1 375 265 99 56 chr2 77564673 77564835 -175691748 - MIR SINE MIR -71 191 23 24 53 0 0 chr2 77565543 77565581 -175691002 + GC_rich Low_complexity Low_complexity 1 38 0 1003 50 0 0 chr2 77565982 77566103 -175690480 + AluSg/x SINE Alu 178 298 -12 2120 123 7 0 chr2 77566110 77566420 -175690163 + AluSq SINE Alu 1 312 -1 294 125 0 0 chr2 77566423 77566471 -175690112 + (GGGA)n Simple_repeat Simple_repeat 2 49 0 244 257 218 0 chr2 77566721 77566822 -175689761 - L2 LINE L2 0 3313 3191 2439 63 3 0 chr2 77566863 77567166 -175689417 - AluSx SINE Alu -8 304 1 265 250 133 58 chr2 77567171 77567291 -175689292 - MIR SINE MIR -115 147 19 2247 92 3 6 chr2 77567291 77567605 -175688978 + AluSp SINE Alu 1 313 0 748 246 45 10 chr2 77567624 77567823 -175688760 - MIR SINE MIR -21 241 36 317 189 41 90 chr2 77568033 77568155 -175688428 + MER112 DNA MER1_type 1 116 -144 1141 211 111 43 chr2 77568158 77568299 -175688284 + AluJo SINE Alu 2 132 -170 2150 80 48 0 chr2 77568299 77568588 -175687995 + AluSx SINE Alu 1 303 -9 1141 211 111 43 chr2 77568588 77568725 -175687858 + AluJo SINE Alu 132 299 -3 376 138 15 31 chr2 77568728 77568793 -175687790 + AluSg/x SINE Alu 185 248 -52 1126 165 0 10 chr2 77568793 77568993 -175687590 + AluJo SINE Alu 85 282 -30 2082 100 7 7 chr2 77569028 77569319 -175687264 - AluSq SINE Alu -10 303 13 1872 153 0 25 chr2 77569343 77569663 -175686920 - AluSx SINE Alu 0 312 1 36 0 0 0 chr2 77569666 77569702 -175686881 + AT_rich Low_complexity Low_complexity 1 36 0 2081 102 24 0 chr2 77569712 77570005 -175686578 + AluSp SINE Alu 1 300 -13 2115 102 7 10 chr2 77570082 77570377 -175686206 - AluSg SINE Alu -16 294 1 865 191 6 6 chr2 77570538 77570700 -175685883 - FRAM SINE Alu -15 161 1 1864 128 32 0 chr2 77571147 77571428 -175685155 + AluSg SINE Alu 1 290 -20 813 139 0 29 chr2 77571439 77571576 -175685007 + FLAM_C SINE Alu 1 133 0 1486 136 115 25 chr2 77571639 77571918 -175684665 - AluSx SINE Alu -8 304 1 1318 169 85 27 chr2 77571958 77572253 -175684330 + AluJb SINE Alu 1 312 0 2046 76 11 4 chr2 77573734 77574011 -175682572 - AluY SINE Alu -18 293 15 2436 71 3 0 chr2 77574172 77574480 -175682103 - AluSp SINE Alu -4 309 1 2394 63 3 0 chr2 77574490 77574790 -175681793 - AluY SINE Alu -10 301 1 531 0 0 0 chr2 77576453 77576512 -175680071 + (CA)n Simple_repeat Simple_repeat 2 60 0 2044 114 0 0 chr2 77576589 77576870 -175679713 - AluSx SINE Alu -20 292 12 1988 106 4 0 chr2 77577529 77577803 -175678780 - AluSq SINE Alu -15 298 24 540 151 12 0 chr2 77578258 77578344 -175678239 + AluJb SINE Alu 2 88 -224 311 71 24 0 chr2 77578344 77578386 -175678197 + MER4E LTR ERV1 654 696 -70 284 93 53 0 chr2 77578406 77578481 -175678102 + (TA)n Simple_repeat Simple_repeat 1 79 0 2044 115 21 0 chr2 77578482 77578768 -175677815 - AluSx SINE Alu -18 294 3 1891 103 4 7 chr2 77578776 77579048 -175677535 - AluSq SINE Alu -5 308 38 1164 148 20 94 chr2 77579073 77579153 -175677430 + AluJb SINE Alu 73 157 -155 2256 93 3 0 chr2 77579153 77579453 -175677130 + AluSx SINE Alu 1 301 -11 1164 148 20 94 chr2 77579453 77579616 -175676967 + AluJb SINE Alu 157 298 -14 228 288 88 53 chr2 77579779 77580005 -175676578 + HAL1 LINE L1 2257 2490 -17 1406 121 7 92 chr2 77580005 77580286 -175676297 - AluJo SINE Alu -19 293 37 849 209 36 18 chr2 77580333 77580558 -175676025 + L1MC5 LINE L1 7016 7244 -717 526 194 60 22 chr2 77580572 77580706 -175675877 + L1MC5 LINE L1 7786 7924 -37 1975 141 0 7 chr2 77580715 77581019 -175675564 + AluJb SINE Alu 1 302 -10 1466 120 154 19 chr2 77584103 77584362 -175672221 + AluJo SINE Alu 1 294 -8 2140 106 0 3 chr2 77584362 77584663 -175671920 + AluSx SINE Alu 1 300 -12 2245 89 0 3 chr2 77584861 77585163 -175671420 - AluSc SINE Alu -6 303 3 2059 122 7 0 chr2 77585428 77585731 -175670852 - AluSg SINE Alu -5 305 1 2311 82 7 3 chr2 77585874 77586178 -175670405 - AluSq SINE Alu -8 305 1 840 130 8 0 chr2 77586181 77586312 -175670271 - AluSp SINE Alu -181 132 1 2058 113 3 3 chr2 77586394 77586686 -175669897 + AluSc SINE Alu 1 292 -17 974 298 77 40 chr2 77586797 77587019 -175669564 - L2 LINE L2 -35 3278 3066 2201 97 3 3 chr2 77587019 77587317 -175669266 + AluSp SINE Alu 1 298 -15 974 298 77 40 chr2 77587317 77587550 -175669033 - L2 LINE L2 -247 3066 2806 2139 108 3 0 chr2 77587630 77587926 -175668657 - AluSx SINE Alu -15 297 1 40 0 0 0 chr2 77587926 77587966 -175668617 + AT_rich Low_complexity Low_complexity 1 40 0 1957 133 3 0 chr2 77588065 77588388 -175668195 - AluSx SINE Alu 0 324 1 966 166 6 0 chr2 77588391 77588554 -175668029 - FRAM SINE Alu -20 156 1 327 298 137 0 chr2 77588922 77589053 -175667530 - MIR3 SINE MIR -7 201 53 748 206 0 0 chr2 77589055 77589186 -175667397 + FLAM_A SINE Alu 1 131 -2 1906 125 31 0 chr2 77589191 77589478 -175667105 + AluSx SINE Alu 1 296 -16 234 0 0 0 chr2 77590405 77590431 -175666152 + (TCCCC)n Simple_repeat Simple_repeat 2 27 0 368 275 138 14 chr2 77591388 77591526 -175665057 + MIR SINE MIR 108 262 0 224 215 123 15 chr2 77592249 77592314 -175664269 + MIR SINE MIR 123 194 -68 562 259 63 11 chr2 77594777 77594951 -175661632 + MIR SINE MIR 66 248 -14 202 171 0 24 chr2 77594920 77594961 -175661622 + L2 LINE L2 3263 3302 -11 * 751 185 22 84 chr2 77595059 77595132 -175661451 + MER5A DNA MER1_type 5 81 -108 2206 84 24 0 chr2 77595132 77595428 -175661155 + AluSp SINE Alu 1 303 -10 751 185 22 84 chr2 77595428 77595532 -175661051 + MER5A DNA MER1_type 81 171 -18 584 254 0 0 chr2 77596134 77596248 -175660335 + MER81 DNA DNA 1 114 0 497 306 102 10 chr2 77596764 77596970 -175659613 + MIR SINE MIR 11 235 -27 339 269 29 10 chr2 77597746 77597850 -175658733 + MIR SINE MIR 118 223 -39 1266 129 13 43 chr2 77597960 77598193 -175658390 + AluJo SINE Alu 81 306 -6 2280 77 27 3 chr2 77606704 77607001 -175649582 + AluY SINE Alu 1 304 -7 605 286 91 35 chr2 77609325 77609442 -175647141 + L2 LINE L2 2572 2681 -633 714 199 21 11 chr2 77609442 77609628 -175646955 + L1MA10 LINE L1 6147 6334 0 605 286 91 35 chr2 77609628 77609741 -175646842 + L2 LINE L2 2681 2815 -499 30 45 0 0 chr2 77609931 77609975 -175646608 + AT_rich Low_complexity Low_complexity 1 44 0 338 333 62 8 chr2 77610026 77610155 -175646428 + L2 LINE L2 3137 3272 0 184 350 40 10 chr2 77610160 77610260 -175646323 - L2 LINE L2 -701 2613 2511 2087 131 3 6 chr2 77610523 77610836 -175645747 + AluJb SINE Alu 1 312 0 2423 72 0 0 chr2 77611330 77611635 -175644948 - AluY SINE Alu -6 305 1 661 209 0 60 chr2 77611719 77611853 -175644730 + FLAM_A SINE Alu 5 130 -3 1991 124 6 10 chr2 77612304 77612618 -175643965 - AluSq SINE Alu 0 313 1 2384 51 7 0 chr2 77612856 77613148 -175643435 - AluY SINE Alu -16 295 2 31 0 0 0 chr2 77613691 77613722 -175642861 + GC_rich Low_complexity Low_complexity 1 31 0 206 301 10 48 chr2 77617578 77617681 -175638902 - L2 LINE L2 -1085 2229 2131 2244 84 10 3 chr2 77617754 77618051 -175638532 + AluSc SINE Alu 1 299 -10 823 194 0 88 chr2 77619044 77619214 -175637369 - AluJo/FRAM SINE Alu -1 311 157 279 185 0 0 chr2 77619215 77619269 -175637314 - AluJ/FLAM SINE Alu -215 87 34 541 353 57 46 chr2 77620545 77621001 -175635582 - L2 LINE L2 -5 3267 2807 1907 158 7 3 chr2 77621071 77621381 -175635202 - AluJb SINE Alu -1 311 1 22 0 0 0 chr2 77621541 77621563 -175635020 + AT_rich Low_complexity Low_complexity 1 22 0 2149 135 0 0 chr2 77621776 77622088 -175634495 + AluSx SINE Alu 1 312 0 555 208 0 0 chr2 77622113 77622243 -175634340 + CT-rich Low_complexity Low_complexity 2 131 0 640 345 134 22 chr2 77622246 77622924 -175633659 - L2 LINE L2 -1037 2277 1524 185 0 40 0 chr2 77624302 77624327 -175632256 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 1980 118 55 0 chr2 77625025 77625314 -175631269 + AluJb SINE Alu 1 305 -7 188 246 51 119 chr2 77627502 77627620 -175628963 - L2 LINE L2 -6 3266 3157 23 0 0 0 chr2 77633553 77633576 -175623007 + AT_rich Low_complexity Low_complexity 1 23 0 2204 117 0 0 chr2 77635275 77635584 -175620999 - AluSg SINE Alu 0 310 2 238 293 20 20 chr2 77639818 77639917 -175616666 + G-rich Low_complexity Low_complexity 1 99 0 1060 76 0 0 chr2 77640424 77640555 -175616028 - AluSg SINE Alu -179 131 1 1654 167 36 23 chr2 77641066 77641372 -175615211 - AluJo SINE Alu -2 310 1 1874 138 132 0 chr2 77641442 77641746 -175614837 - MER2 DNA MER2_type 0 344 1 308 372 55 14 chr2 77642150 77642295 -175614288 - L1MCa LINE L1 -4332 2094 1944 2024 136 0 0 chr2 77642419 77642758 -175613825 + AluJo SINE Alu 1 312 0 228 67 0 0 chr2 77642922 77642952 -175613631 + (CA)n Simple_repeat Simple_repeat 2 31 0 349 300 196 62 chr2 77642962 77643035 -175613548 + L2 LINE L2 1752 1814 -1500 2299 97 3 0 chr2 77643035 77643333 -175613250 - AluSx SINE Alu -13 299 1 349 300 196 62 chr2 77643333 77643982 -175612601 + L2 LINE L2 1814 2571 -743 2031 111 0 63 chr2 77644006 77644339 -175612244 + AluSx SINE Alu 1 312 0 285 280 0 137 chr2 77644363 77644430 -175612153 + L2 LINE L2 2690 2723 -591 1993 93 14 4 chr2 77644430 77644744 -175611839 + AluSx SINE Alu 1 317 0 285 280 0 137 chr2 77644744 77644843 -175611740 + L2 LINE L2 2723 2834 -480 321 232 37 24 chr2 77644848 77644930 -175611653 + L2 LINE L2 3230 3312 -1 2108 259 86 86 chr2 77645863 77647092 -175609491 + L2 LINE L2 1789 3056 -257 183 80 0 0 chr2 77647092 77647117 -175609466 + (CTTA)n Simple_repeat Simple_repeat 1 25 0 2426 56 10 0 chr2 77647118 77647422 -175609161 - AluSp SINE Alu -6 307 1 1789 133 21 39 chr2 77647430 77647716 -175608867 - AluJb SINE Alu -20 292 12 284 254 0 0 chr2 77647720 77647783 -175608800 + L2 LINE L2 3251 3313 0 745 354 94 41 chr2 77647986 77648914 -175607669 + L3 LINE CR1 72 1077 -500 27 0 0 0 chr2 77649260 77649287 -175607296 + GC_rich Low_complexity Low_complexity 1 27 0 23 0 0 0 chr2 77649491 77649514 -175607069 + GC_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 77649752 77649773 -175606810 + GC_rich Low_complexity Low_complexity 1 21 0 347 335 150 6 chr2 77651043 77651210 -175605373 - MIR SINE MIR -2 260 70 2181 114 0 3 chr2 77651343 77651642 -175604941 - AluSx SINE Alu -14 298 1 218 269 135 48 chr2 77651670 77651774 -175604809 - L3 LINE CR1 -15 1562 1450 644 330 43 23 chr2 77651815 77652115 -175604468 - L3 LINE CR1 -224 1353 1048 393 243 126 0 chr2 77652455 77652566 -175604017 - MIR3 SINE MIR -3 205 81 255 350 0 0 chr2 77653066 77653223 -175603360 + GA-rich Low_complexity Low_complexity 2 158 0 250 195 5 118 chr2 77653158 77653353 -175603230 + (CAGAGA)n Simple_repeat Simple_repeat 4 176 0 * 339 316 7 0 chr2 77653295 77653450 -175603133 + GA-rich Low_complexity Low_complexity 1 156 0 248 263 6 56 chr2 77654389 77654549 -175602034 + C-rich Low_complexity Low_complexity 4 155 0 29 0 0 0 chr2 77654632 77654661 -175601922 + GC_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr2 77654725 77654760 -175601823 + GC_rich Low_complexity Low_complexity 1 35 0 315 211 105 83 chr2 77658139 77658272 -175598311 + MIR SINE MIR 79 214 -48 822 143 0 43 chr2 77658303 77658443 -175598140 - AluJb SINE Alu -177 135 2 1901 129 14 10 chr2 77659573 77659868 -175596715 - AluJb SINE Alu -16 296 1 500 248 72 20 chr2 77660049 77660202 -175596381 + MIR SINE MIR 96 256 -6 201 114 23 68 chr2 77660508 77660552 -175596031 + GA-rich Low_complexity Low_complexity 3 44 0 1389 98 0 0 chr2 77661426 77661689 -175594894 + (GGA)n Simple_repeat Simple_repeat 3 264 0 831 172 0 25 chr2 77663189 77663346 -175593237 + FRAM SINE Alu 12 164 -12 767 151 50 0 chr2 77663508 77663627 -175592956 + FLAM_C SINE Alu 2 126 -17 230 95 24 0 chr2 77663638 77663680 -175592903 + (TAGA)n Simple_repeat Simple_repeat 2 44 0 2135 116 3 0 chr2 77663726 77664036 -175592547 + AluSq SINE Alu 1 311 -2 228 313 0 0 chr2 77664909 77664973 -175591610 - MIR SINE MIR -1 261 198 2241 90 0 7 chr2 77665347 77665647 -175590936 + AluSx SINE Alu 1 298 -14 253 128 128 0 chr2 77665647 77665694 -175590889 - L2 LINE L2 -20 3293 3241 1921 228 19 22 chr2 77665701 77665955 -175590628 + L1M4 LINE L1 3667 3920 -2226 2064 97 0 7 chr2 77665955 77666234 -175590349 + AluSg SINE Alu 1 277 -33 381 22 0 0 chr2 77666234 77666280 -175590303 + (CA)n Simple_repeat Simple_repeat 1 46 0 1921 228 19 22 chr2 77666280 77666488 -175590095 + L1M4 LINE L1 3918 4129 -2017 280 353 89 30 chr2 77666767 77667002 -175589581 - L2 LINE L2 -215 3057 2809 30 0 0 0 chr2 77667529 77667559 -175589024 + AT_rich Low_complexity Low_complexity 1 30 0 713 237 213 0 chr2 77667848 77668055 -175588528 + MIR SINE MIR 9 259 -3 277 293 115 0 chr2 77669441 77669615 -175586968 + L1MDb LINE L1 1000 1193 -5216 284 312 80 0 chr2 77669616 77669741 -175586842 - MIR SINE MIR -5 257 123 2151 98 20 0 chr2 77669786 77670083 -175586500 - AluSx SINE Alu -9 303 1 438 69 0 0 chr2 77670285 77670343 -175586240 + (TG)n Simple_repeat Simple_repeat 1 58 0 327 310 35 26 chr2 77670562 77670678 -175585905 - MIR SINE MIR -126 136 20 310 313 119 51 chr2 77670981 77671417 -175585166 - L2 LINE L2 -215 3057 2565 291 339 134 23 chr2 77671491 77671798 -175584785 - L2 LINE L2 -606 2708 2368 2300 94 3 3 chr2 77672123 77672432 -175584151 + AluSp SINE Alu 1 309 -4 1488 172 19 0 chr2 77672756 77673017 -175583566 - AluJo SINE Alu -34 278 13 741 263 35 15 chr2 77673022 77673220 -175583363 + MIR SINE MIR 54 255 -7 236 261 77 0 chr2 77673285 77673350 -175583233 + L2 LINE L2 3243 3312 -1 2128 94 0 30 chr2 77673463 77673762 -175582821 - AluSg SINE Alu -20 290 1 2028 119 0 0 chr2 77673773 77674059 -175582524 - AluSx SINE Alu -24 288 3 486 275 13 7 chr2 77674061 77674210 -175582373 - L1ME LINE L1 -342 5779 5630 1026 292 93 77 chr2 77674673 77674809 -175581774 + L2 LINE L2 2395 2527 -745 263 111 0 0 chr2 77674809 77674845 -175581738 - U2 snRNA snRNA -152 36 1 1026 292 93 77 chr2 77674845 77675504 -175581079 + L2 LINE L2 2527 3246 -26 244 274 0 32 chr2 77676100 77676162 -175580421 + L2 LINE L2 3181 3240 -32 964 154 11 28 chr2 77676253 77676435 -175580148 - FRAM SINE Alu -2 174 1 191 244 24 0 chr2 77678244 77678285 -175578298 + MER5B DNA MER1_type 1 42 -136 1850 127 74 18 chr2 77678285 77678569 -175578014 - MER1B DNA MER1_type 0 339 40 604 206 7 90 chr2 77678584 77678675 -175577908 + MER5B DNA MER1_type 35 109 -69 1535 64 0 0 chr2 77678675 77678863 -175577720 - L1PA6 LINE L1 -9 6145 5958 604 206 7 90 chr2 77678863 77678926 -175577657 + MER5B DNA MER1_type 109 176 -2 572 238 65 19 chr2 77679868 77680041 -175576542 + MIR SINE MIR 12 186 -22 316 191 32 43 chr2 77680103 77680197 -175576386 + HsTC2 DNA Tc2 1743 1835 -63 1526 173 21 17 chr2 77680226 77680515 -175576068 - AluJo SINE Alu -22 290 1 524 108 0 0 chr2 77680517 77680591 -175575992 + HsTC2 DNA Tc2 1825 1898 0 360 235 69 0 chr2 77680591 77680693 -175575890 + MIR SINE MIR 150 258 -4 1343 150 3 70 chr2 77682332 77682619 -175573964 - AluJo SINE Alu -19 293 26 475 297 98 49 chr2 77682661 77683109 -175573474 + L1ME4a LINE L1 5612 6081 -40 1849 131 40 0 chr2 77683151 77683461 -175573122 + AluSq SINE Alu 5 325 0 30 0 0 0 chr2 77683633 77683663 -175572920 + AT_rich Low_complexity Low_complexity 1 30 0 798 159 0 36 chr2 77684736 77684874 -175571709 + FLAM_A SINE Alu 1 133 0 216 0 0 0 chr2 77685214 77685238 -175571345 + (TA)n Simple_repeat Simple_repeat 2 25 0 1921 155 0 0 chr2 77685248 77685551 -175571032 - AluJb SINE Alu -9 303 1 235 333 93 67 chr2 77686219 77686766 -175569817 + L2 LINE L2 2596 3263 -9 2343 77 0 3 chr2 77687127 77687427 -175569156 + AluSp SINE Alu 1 299 -14 2417 74 0 0 chr2 77687595 77687906 -175568677 - AluY SINE Alu 0 311 1 240 240 0 80 chr2 77688677 77688752 -175567831 + Charlie4 DNA MER1_type 1892 1960 -1 1063 311 83 16 chr2 77689274 77689721 -175566862 - L2 LINE L2 0 3313 2837 1447 88 113 0 chr2 77690278 77690482 -175566101 + MER30 DNA MER1_type 4 230 0 2038 154 11 46 chr2 77690515 77690885 -175565698 - MLT1A1 LTR MaLR -8 357 1 335 256 24 12 chr2 77691258 77691340 -175565243 + L2 LINE L2 3189 3271 -1 472 289 23 0 chr2 77691345 77691473 -175565110 + MIR SINE MIR 61 191 -71 1820 131 35 0 chr2 77692200 77692363 -175564220 - AluSx SINE Alu -18 294 115 219 36 0 0 chr2 77692363 77692391 -175564192 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 1820 131 35 0 chr2 77692391 77692509 -175564074 - AluSx SINE Alu -197 115 3 962 259 60 32 chr2 77692713 77693350 -175563233 - L1MC/D LINE L1 -743 5403 4822 1698 277 48 57 chr2 77693730 77693781 -175562802 + L1ME LINE L1 495 545 -5985 1852 165 0 0 chr2 77693781 77694089 -175562494 - AluSx SINE Alu 0 308 1 1698 277 48 57 chr2 77694089 77694822 -175561761 + L1ME LINE L1 545 1273 -5257 912 214 47 68 chr2 77694841 77695000 -175561583 + L1ME LINE L1 1469 1630 -4910 1711 174 0 17 chr2 77695000 77695298 -175561285 + AluJb SINE Alu 1 293 -19 912 214 47 68 chr2 77695298 77695521 -175561062 + L1ME LINE L1 1630 1843 -4697 1219 168 5 0 chr2 77695521 77695723 -175560860 - AluJo SINE Alu -109 203 1 324 189 84 158 chr2 77695723 77695768 -175560815 + L1ME LINE L1 2116 2163 -4377 1951 121 0 0 chr2 77695768 77696040 -175560543 - AluJb SINE Alu -20 292 21 324 189 84 158 chr2 77696040 77696184 -175560399 + L1ME LINE L1 2163 2291 -4249 1020 230 59 12 chr2 77696279 77696706 -175559877 + L1ME LINE L1 2262 2706 -3834 2238 74 0 0 chr2 77696709 77697027 -175559556 + AluY SINE Alu 1 318 0 1795 249 52 12 chr2 77697035 77697536 -175559047 + L1ME1 LINE L1 5645 6165 -1 23 33 0 0 chr2 77697543 77697573 -175559010 + AT_rich Low_complexity Low_complexity 1 30 0 450 173 13 0 chr2 77698007 77698082 -175558501 + L3 LINE CR1 231 306 -1271 376 328 78 33 chr2 77698083 77698263 -175558320 + L3 LINE CR1 467 654 -923 2006 117 0 0 chr2 77698508 77698824 -175557759 + AluSx SINE Alu 1 316 0 2041 147 13 3 chr2 77699030 77699330 -175557253 - AluJb SINE Alu -9 303 1 2035 117 21 3 chr2 77699404 77699686 -175556897 + AluSx SINE Alu 1 287 -25 550 276 53 39 chr2 77699710 77700069 -175556514 - L1M4 LINE L1 -1039 5107 4744 183 42 0 0 chr2 77700178 77700202 -175556381 + (CA)n Simple_repeat Simple_repeat 2 25 0 615 186 17 25 chr2 77700241 77700359 -175556224 - AluJo SINE Alu -15 297 181 496 196 226 0 chr2 77700370 77700472 -175556111 - AluJo SINE Alu -187 125 1 281 286 210 49 chr2 77700509 77700733 -175555850 + MIR SINE MIR 2 261 -1 430 169 50 189 chr2 77701391 77701592 -175554991 - MIR SINE MIR -11 251 79 306 287 50 15 chr2 77701613 77701815 -175554768 + L1MC4a LINE L1 5751 5959 -1849 325 282 18 49 chr2 77701815 77701978 -175554605 + HAL1b LINE L1 1188 1345 -3 333 323 39 31 chr2 77702629 77702756 -175553827 - L2 LINE L2 0 3272 3145 405 299 197 7 chr2 77702857 77703004 -175553579 - MIR SINE MIR -57 205 31 191 287 213 0 chr2 77703642 77703750 -175552833 - L2 LINE L2 0 3313 3183 2110 133 6 29 chr2 77704739 77705084 -175551499 - MER1B DNA MER1_type 0 337 1 826 77 29 0 chr2 77705336 77705440 -175551143 + AluSq/x SINE Alu 1 107 -206 378 275 69 23 chr2 77705527 77705658 -175550925 + L1ME LINE L1 5523 5659 -462 812 155 7 39 chr2 77705691 77705846 -175550737 - MER45C DNA AcHobo 0 953 804 657 148 0 23 chr2 77705868 77705996 -175550587 - L1MB1 LINE L1 0 6168 6044 2395 71 0 3 chr2 77706028 77706325 -175550258 + AluY SINE Alu 2 297 -14 337 171 40 53 chr2 77706325 77706401 -175550182 - MER45C DNA AcHobo -157 796 722 1033 226 54 5 chr2 77706533 77706754 -175549829 - MER45C DNA AcHobo -721 232 1 919 27 0 0 chr2 77707305 77707416 -175549167 - L1PA4 LINE L1 -3 6152 6042 2274 76 3 10 chr2 77707891 77708182 -175548401 - AluSg SINE Alu -21 289 1 6333 120 18 6 chr2 77708326 77709349 -175547234 - L1MC1 LINE L1 -1 6332 5298 6097 119 41 9 chr2 77709339 77710413 -175546170 - L1MA6 LINE L1 0 6300 5197 * 1950 138 0 36 chr2 77710413 77710717 -175545866 - AluJb SINE Alu -19 293 1 6097 119 41 9 chr2 77710717 77710853 -175545730 - L1MA6 LINE L1 -1103 5197 5067 1654 161 28 32 chr2 77710869 77711154 -175545429 - AluJo SINE Alu -26 286 3 5633 157 30 30 chr2 77711156 77712034 -175544549 - L1MA6 LINE L1 -2064 4082 3205 1781 83 4 21 chr2 77712034 77712275 -175544308 + AluSp SINE Alu 76 312 -1 5633 157 30 30 chr2 77712275 77712291 -175544292 - L1MA6 LINE L1 -2941 3205 3190 2536 52 10 3 chr2 77712291 77712599 -175543984 - AluY SINE Alu -1 310 1 5633 157 30 30 chr2 77712599 77712621 -175543962 - L1MA6 LINE L1 -2956 3190 3169 1658 163 4 14 chr2 77712621 77712897 -175543686 - AluJo SINE Alu -8 304 32 5633 157 30 30 chr2 77712897 77713199 -175543384 - L1MA6 LINE L1 -2976 3170 2862 * 6328 127 75 62 chr2 77713198 77714248 -175542335 - L1MCa LINE L1 -5042 1384 312 1540 160 8 4 chr2 77714248 77714485 -175542098 - AluJo SINE Alu -63 249 12 6328 127 75 62 chr2 77714485 77714782 -175541801 - L1MCa LINE L1 -6114 312 20 203 321 0 0 chr2 77715670 77715723 -175540860 - L2 LINE L2 -4 3268 3216 2253 193 35 55 chr2 77716606 77717351 -175539232 - Charlie2 DNA MER1_type -1 2861 2132 2116 65 18 0 chr2 77717818 77718096 -175538487 + L1PA13 LINE L1 5877 6159 -4 2321 46 16 33 chr2 77721408 77721715 -175534868 + AluY SINE Alu 1 302 -9 832 201 52 82 chr2 77721787 77721912 -175534671 + MER33 DNA MER1_type 6 133 -2452 2439 55 0 26 chr2 77721912 77722224 -175534359 + AluY SINE Alu 1 304 -7 2073 121 0 43 chr2 77722234 77722557 -175534026 + AluSx SINE Alu 1 309 -3 832 201 52 82 chr2 77722557 77722643 -175533940 + MER33 DNA MER1_type 142 229 -2356 2289 80 17 0 chr2 77722643 77722943 -175533640 - AluSq SINE Alu -8 305 1 832 201 52 82 chr2 77722943 77723048 -175533535 + MER33 DNA MER1_type 229 324 0 474 305 102 44 chr2 77723263 77723624 -175532959 + L1MEc LINE L1 2013 2394 -4002 1913 168 3 0 chr2 77723630 77723927 -175532656 + AluJb SINE Alu 1 298 -14 366 291 55 18 chr2 77723942 77724052 -175532531 - MER5B DNA MER1_type -57 121 8 2037 138 3 0 chr2 77724090 77724379 -175532204 - AluJo SINE Alu -22 290 1 1252 271 71 16 chr2 77725208 77725763 -175530820 - L1MC/D LINE L1 -743 5403 5214 24 53 0 0 chr2 77725818 77725856 -175530727 + AT_rich Low_complexity Low_complexity 1 38 0 628 196 118 13 chr2 77725910 77726063 -175530520 + LTR41 LTR ERVL 1 169 -604 1748 156 36 33 chr2 77726666 77726967 -175529616 - AluJo SINE Alu -10 302 1 293 151 38 0 chr2 77726987 77727040 -175529543 + LTR41 LTR ERVL 713 767 -6 234 268 102 0 chr2 77727052 77727179 -175529404 - L1MC/D LINE L1 -1103 5043 4904 268 284 107 16 chr2 77727612 77727922 -175528661 - L1MC/D LINE L1 -1686 4460 4123 372 303 50 41 chr2 77729354 77729671 -175526912 - L1MC/D LINE L1 -2020 4126 3807 1955 129 55 26 chr2 77729709 77729879 -175526704 + MER46B DNA MER2_type 1 63 -2668 2176 109 0 3 chr2 77729879 77730172 -175526411 + AluSg SINE Alu 1 292 -18 1955 129 55 26 chr2 77730172 77730349 -175526234 + MER46B DNA MER2_type 63 233 -3 1801 172 27 14 chr2 77730349 77730645 -175525938 - AluJb SINE Alu -12 300 1 4065 79 13 4 chr2 77730737 77731291 -175525292 - L1PA10 LINE L1 -3 6165 5607 254 254 26 14 chr2 77731381 77731527 -175525056 - L1MC/D LINE L1 -3776 2370 2220 21 0 0 0 chr2 77731653 77731674 -175524909 + AT_rich Low_complexity Low_complexity 1 21 0 28 61 0 0 chr2 77732024 77732073 -175524510 + AT_rich Low_complexity Low_complexity 1 49 0 3089 200 47 14 chr2 77732542 77733208 -175523375 + MER76 LTR ERV 1 688 0 1003 272 19 0 chr2 77733390 77733647 -175522936 + LTR33 LTR ERVL 1 262 -259 2633 122 12 2 chr2 77733648 77734059 -175522524 + MER31A LTR ERV1 8 422 -63 376 145 26 0 chr2 77734109 77734185 -175522398 + MER31A LTR ERV1 408 485 0 227 209 0 0 chr2 77734185 77734217 -175522366 + LTR33 LTR ERVL 254 285 -236 322 191 29 67 chr2 77734266 77734371 -175522212 + LTR33 LTR ERVL 417 517 -4 249 218 18 0 chr2 77734811 77734866 -175521717 + MLT1F1 LTR MaLR 3 58 -509 6647 207 65 15 chr2 77734872 77737203 -175519380 - L1MDa LINE L1 -1897 4643 2192 585 155 0 0 chr2 77737203 77737287 -175519296 - AluJ/FLAM SINE Alu -228 84 1 3921 248 65 23 chr2 77737289 77738464 -175518119 - L1MDa LINE L1 -4942 1779 538 1906 82 4 0 chr2 77738464 77738707 -175517876 - AluSx SINE Alu -13 299 56 3921 248 65 23 chr2 77738707 77738875 -175517708 - L1MDa LINE L1 -6183 538 379 1879 202 118 9 chr2 77738876 77739308 -175517275 + MLT1F1 LTR MaLR 85 565 -2 183 307 107 64 chr2 77739685 77739825 -175516758 + L3b LINE CR1 1429 1574 -9 2341 89 10 0 chr2 77740872 77741164 -175515419 - AluSc SINE Alu -14 295 1 372 298 89 24 chr2 77741342 77741466 -175515117 + L2 LINE L2 3107 3238 -34 222 320 41 0 chr2 77741647 77741744 -175514839 + L2 LINE L2 2923 3023 -249 1644 248 92 47 chr2 77741763 77742051 -175514532 + L1M4 LINE L1 3273 3547 -2599 981 105 0 0 chr2 77742051 77742184 -175514399 - FLAM_C SINE Alu 0 133 1 1644 248 92 47 chr2 77742184 77742256 -175514327 + L1M4 LINE L1 3547 3614 -2532 2181 75 57 0 chr2 77742256 77742538 -175514045 - AluSp SINE Alu -15 298 1 1644 248 92 47 chr2 77742538 77743116 -175513467 + L1M4 LINE L1 3614 4254 -1892 813 175 0 0 chr2 77743300 77743426 -175513157 - FLAM_C SINE Alu -17 126 1 339 336 50 0 chr2 77743426 77743545 -175513038 - L1M4 LINE L1 -1818 4328 4204 857 210 60 152 chr2 77743593 77743996 -175512587 + L1ME3A LINE L1 5691 6037 -133 2009 136 0 16 chr2 77743996 77744304 -175512279 - AluJb SINE Alu -9 303 1 857 210 60 152 chr2 77744304 77744420 -175512163 + L1ME3A LINE L1 6037 6162 -8 2423 77 0 0 chr2 77744666 77744963 -175511620 + AluSg SINE Alu 1 297 -13 22 35 0 0 chr2 77745300 77745329 -175511254 + AT_rich Low_complexity Low_complexity 1 29 0 317 203 0 0 chr2 77745381 77745450 -175511133 + LTR30 LTR ERV1 556 624 -98 2321 85 44 0 chr2 77745450 77745791 -175510792 + LTR12 LTR ERV1 359 714 0 2566 142 2 5 chr2 77745834 77746250 -175510333 + MER66B LTR ERV1 1 415 -71 23 0 0 0 chr2 77746250 77746273 -175510310 + AT_rich Low_complexity Low_complexity 1 23 0 4571 164 84 44 chr2 77746277 77747314 -175509269 + Tigger6a DNA MER2_type 2 1079 -4 487 183 114 114 chr2 77747819 77748020 -175508563 + ORSL DNA AcHobo 1 204 -71 2238 86 10 10 chr2 77748020 77748333 -175508250 + AluSq SINE Alu 1 313 0 487 183 114 114 chr2 77748333 77748404 -175508179 + ORSL DNA AcHobo 203 273 -2 371 259 56 9 chr2 77749047 77749155 -175507428 - L2 LINE L2 -5 3267 3155 2206 190 13 10 chr2 77749904 77750299 -175506284 - MSTD LTR MaLR 0 396 1 522 333 47 16 chr2 77750447 77750542 -175506041 + LTR16B LTR ERVL 1 92 -372 2305 87 3 3 chr2 77750542 77750853 -175505730 + AluSp SINE Alu 1 311 -2 522 333 47 16 chr2 77750853 77750949 -175505634 + LTR16B LTR ERVL 92 198 -266 908 265 53 128 chr2 77751029 77751779 -175504804 - L2 LINE L2 -427 2887 2194 441 174 46 55 chr2 77751782 77751891 -175504692 - MER112 DNA MER1_type -1 259 152 21 36 0 0 chr2 77752063 77752091 -175504492 + AT_rich Low_complexity Low_complexity 1 28 0 1541 138 24 8 chr2 77752342 77752596 -175503987 - AluJo SINE Alu -54 258 1 301 231 62 0 chr2 77752616 77752681 -175503902 + L2 LINE L2 3244 3312 -1 197 356 132 34 chr2 77752692 77752897 -175503686 - L2 LINE L2 -602 2712 2488 2159 200 16 31 chr2 77752899 77753389 -175503194 + MLT1F LTR MaLR 3 485 -57 300 93 13 147 chr2 77753446 77753521 -175503062 + MLT1F LTR MaLR 503 567 0 187 310 35 26 chr2 77753576 77753592 -175502991 - L2 LINE L2 -911 2403 2389 2612 29 3 0 chr2 77753592 77753900 -175502683 + AluY SINE Alu 1 309 -2 187 310 35 26 chr2 77753900 77753996 -175502587 - L2 LINE L2 -925 2389 2290 326 291 107 59 chr2 77754037 77754250 -175502333 + L2 LINE L2 3016 3246 -67 330 26 0 0 chr2 77754250 77754289 -175502294 + (TG)n Simple_repeat Simple_repeat 1 39 0 326 291 107 59 chr2 77754289 77754346 -175502237 + L2 LINE L2 3246 3299 -14 2250 91 0 3 chr2 77756421 77756718 -175499865 - AluSx SINE Alu -16 296 1 598 169 62 79 chr2 77757401 77757578 -175499005 - MER46A DNA MER2_type -60 176 3 * 1530 156 0 0 chr2 77757436 77757667 -175498916 + MER46A DNA MER2_type 1 231 -5 490 201 124 18 chr2 77757687 77757856 -175498727 + MER112 DNA MER1_type 74 260 0 194 88 0 29 chr2 77760446 77760480 -175496103 + (CAA)n Simple_repeat Simple_repeat 2 34 0 510 304 96 30 chr2 77760480 77760710 -175495873 - MIR SINE MIR -12 250 6 334 311 153 28 chr2 77761167 77761559 -175495024 - L2 LINE L2 -942 2372 1932 1030 160 70 0 chr2 77763598 77763785 -175492798 + MER3 DNA MER1_type 1 200 -9 2237 169 49 5 chr2 77763850 77764258 -175492325 - MSTB LTR MaLR 0 426 1 1307 255 67 28 chr2 77764635 77765199 -175491384 - L1ME4a LINE L1 -207 5914 5329 412 280 84 66 chr2 77765238 77765516 -175491067 - L1ME4a LINE L1 -1028 5118 4833 2262 101 0 0 chr2 77765631 77765937 -175490646 - AluY SINE Alu -5 306 1 2319 94 0 0 chr2 77766305 77766614 -175489969 - AluSg SINE Alu -1 309 1 282 83 0 0 chr2 77766715 77766751 -175489832 - U6 snRNA snRNA -71 36 1 23 0 0 0 chr2 77766821 77766844 -175489739 + AT_rich Low_complexity Low_complexity 1 23 0 812 258 127 45 chr2 77767279 77768002 -175488581 - L1ME4a LINE L1 -11 6110 5327 937 291 50 31 chr2 77768139 77768558 -175488025 + L2 LINE L2 2067 2493 -821 21 0 0 0 chr2 77768871 77768892 -175487691 + AT_rich Low_complexity Low_complexity 1 21 0 2011 104 0 60 chr2 77769022 77769338 -175487245 - AluSx SINE Alu -15 297 1 216 0 0 0 chr2 77769338 77769362 -175487221 + (A)n Simple_repeat Simple_repeat 1 24 0 1471 121 37 146 chr2 77769387 77769709 -175486874 + AluJo SINE Alu 1 287 -15 2066 113 0 3 chr2 77769712 77770050 -175486533 + AluSg SINE Alu 1 310 0 24 32 0 0 chr2 77770382 77770413 -175486170 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr2 77770712 77770733 -175485850 + (TCTG)n Simple_repeat Simple_repeat 4 24 0 422 267 52 97 chr2 77771350 77771586 -175484997 - MIR SINE MIR -4 258 34 505 293 165 54 chr2 77771876 77772433 -175484150 + L2 LINE L2 2017 2635 -679 475 303 67 6 chr2 77773229 77773394 -175483189 + MER5A DNA MER1_type 2 176 -13 556 307 60 40 chr2 77774462 77774713 -175481870 + MIR SINE MIR 7 262 0 1377 281 197 4 chr2 77776516 77777211 -175479372 + L2 LINE L2 1858 2686 -628 413 99 14 14 chr2 77777229 77777300 -175479283 - L1MC5 LINE L1 -188 7773 7703 2182 110 0 0 chr2 77777301 77777610 -175478973 - AluSx SINE Alu -3 309 1 1463 199 84 13 chr2 77777639 77778031 -175478552 - L1MC5 LINE L1 -51 7910 7491 598 193 135 26 chr2 77782287 77782479 -175474104 + MIR SINE MIR 47 259 -3 2464 57 0 0 chr2 77782542 77782839 -175473744 + AluY SINE Alu 1 297 -14 1922 177 22 16 chr2 77783207 77783574 -175473009 + MER74A LTR ERVL 190 558 0 185 221 130 65 chr2 77784630 77784707 -175471876 - L3 LINE CR1 -270 1307 1226 460 267 109 34 chr2 77784740 77785051 -175471532 - MLT1I LTR MaLR -2 407 49 1750 134 3 30 chr2 77785095 77785400 -175471183 + AluJb SINE Alu 7 303 -9 621 262 69 35 chr2 77785857 77786059 -175470524 - MLT1K LTR MaLR -233 355 147 6450 55 55 23 chr2 77786188 77786503 -175470080 + L1PA6 LINE L1 5209 5512 -642 2433 69 0 0 chr2 77786503 77786806 -175469777 - AluY SINE Alu -8 303 1 6450 55 55 23 chr2 77786806 77787408 -175469175 + L1PA6 LINE L1 5512 6154 0 977 298 126 23 chr2 77787414 77787973 -175468610 + L2 LINE L2 2702 3313 0 487 263 77 12 chr2 77788414 77788621 -175467962 - MIR SINE MIR -27 235 4 413 338 60 0 chr2 77789308 77789441 -175467142 - L2 LINE L2 -9 3263 3123 628 289 26 15 chr2 77789775 77790045 -175466538 + L1ME LINE L1 5502 5774 -347 1947 166 15 10 chr2 77790102 77790639 -175465944 + MER90 LTR ERV1 1 614 0 22 0 0 0 chr2 77790770 77790792 -175465791 + AT_rich Low_complexity Low_complexity 1 22 0 186 254 45 45 chr2 77791438 77791505 -175465078 - MIR SINE MIR -98 164 98 520 256 103 32 chr2 77793351 77793663 -175462920 - L1ME4a LINE L1 -23 6098 5765 290 248 80 103 chr2 77793701 77794012 -175462571 - L1ME4a LINE L1 -1980 4166 3863 894 247 84 27 chr2 77794101 77794397 -175462186 - L1MC4a LINE L1 -1882 5926 5614 336 276 148 35 chr2 77794723 77794926 -175461657 - MIR SINE MIR -17 245 20 193 293 0 73 chr2 77795121 77795203 -175461380 - L2 LINE L2 -10 3262 3187 1344 148 14 0 chr2 77795263 77795493 -175461090 - L1MC1 LINE L1 -349 5822 5591 193 270 81 14 chr2 77796328 77796402 -175460181 - MIR3 SINE MIR -11 197 119 21 0 0 0 chr2 77796540 77796561 -175460022 + AT_rich Low_complexity Low_complexity 1 21 0 2296 93 0 6 chr2 77796593 77796905 -175459678 - AluSx SINE Alu -2 310 1 1298 280 55 7 chr2 77796933 77796971 -175459612 - L1PB1 LINE L1 -140 5981 5946 1158 82 0 6 chr2 77796971 77797130 -175459453 + L1PB1 LINE L1 5993 6150 -1 1298 280 55 7 chr2 77797130 77797547 -175459036 - L1MC4a LINE L1 -175 5946 5504 277 277 0 53 chr2 77797822 77797916 -175458667 - MIR SINE MIR -65 197 109 841 284 44 0 chr2 77798337 77798541 -175458042 - MER115 DNA AcHobo -376 317 105 812 150 0 7 chr2 77799378 77799518 -175457065 - FLAM_C SINE Alu 0 143 5 539 345 104 21 chr2 77799539 77799875 -175456708 - L3 LINE CR1 -109 1468 1105 478 284 185 56 chr2 77799852 77800751 -175455832 - L2 LINE L2 -968 2346 1332 * 888 194 97 5 chr2 77800978 77801174 -175455409 - MIR SINE MIR -32 230 17 257 344 0 0 chr2 77801822 77801915 -175454668 + L2 LINE L2 1166 1258 -2056 626 218 58 21 chr2 77802576 77802764 -175453819 + L2 LINE L2 2221 2415 -899 421 265 19 68 chr2 77803388 77803550 -175453033 - L2 LINE L2 0 3313 3160 417 297 79 0 chr2 77804795 77804960 -175451623 + MIR SINE MIR 30 207 -55 732 288 100 26 chr2 77805601 77805981 -175450602 + L1ME4a LINE L1 5537 5970 -151 1780 171 0 10 chr2 77805981 77806274 -175450309 - AluJo SINE Alu -22 290 1 732 288 100 26 chr2 77806274 77806432 -175450151 + L1ME4a LINE L1 5970 6115 -6 455 310 118 5 chr2 77806508 77806711 -175449872 - MIR SINE MIR -6 256 31 29 0 0 0 chr2 77807454 77807483 -175449100 + AT_rich Low_complexity Low_complexity 1 29 0 1132 223 65 38 chr2 77807492 77807763 -175448820 + L1MC4 LINE L1 7640 7925 -117 246 105 0 0 chr2 77807763 77807801 -175448782 + (TCTA)n Simple_repeat Simple_repeat 1 38 0 1132 223 65 38 chr2 77807801 77807901 -175448682 + L1MC4 LINE L1 7925 8021 -21 2965 242 71 13 chr2 77807935 77807993 -175448590 + L1MEc LINE L1 34 87 -6309 186 43 0 0 chr2 77807993 77808016 -175448567 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2965 242 71 13 chr2 77808016 77808741 -175447842 + L1MEc LINE L1 87 863 -5533 1814 221 86 27 chr2 77808738 77809290 -175447293 + L1ME1 LINE L1 439 1310 -5230 * 1285 189 8 4 chr2 77809291 77809529 -175447054 + AluJb SINE Alu 1 239 -73 1282 160 102 7 chr2 77809532 77809807 -175446776 + L1ME1 LINE L1 1627 1927 -4613 1035 192 41 121 chr2 77810066 77810404 -175446179 - MSTD LTR MaLR -49 347 37 3847 189 40 33 chr2 77810783 77810980 -175445603 + L1ME1 LINE L1 5679 5873 -687 2405 80 0 3 chr2 77810980 77811279 -175445304 + AluY SINE Alu 1 298 -13 3847 189 40 33 chr2 77811279 77811952 -175444631 + L1ME1 LINE L1 5873 6555 -5 2144 132 3 3 chr2 77812019 77812330 -175444253 - AluSx SINE Alu -1 311 1 496 258 58 58 chr2 77813336 77813596 -175442987 + MIR SINE MIR 2 261 -1 190 333 0 0 chr2 77813826 77813883 -175442700 - L2 LINE L2 -79 3193 3137 299 262 50 43 chr2 77814323 77814464 -175442119 + MIR SINE MIR 80 221 -41 607 222 102 6 chr2 77814562 77814738 -175441845 - MIR SINE MIR -7 255 63 646 234 82 0 chr2 77814839 77815023 -175441560 - MIR SINE MIR -57 205 7 2182 106 0 42 chr2 77816609 77816921 -175439662 - AluSx SINE Alu -13 299 1 535 316 71 5 chr2 77818062 77818258 -175438325 - MIR SINE MIR 0 262 54 348 331 128 43 chr2 77818384 77819178 -175437405 - L2 LINE L2 -556 2758 1897 343 317 28 0 chr2 77819179 77819324 -175437259 + L1ME4a LINE L1 5748 5896 -225 1301 239 121 30 chr2 77819923 77820362 -175436221 - L1MC5 LINE L1 -52 7909 7511 2349 196 18 51 chr2 77820362 77820912 -175435671 + LTR5 LTR ERVK 1 532 -437 2268 76 0 7 chr2 77820912 77821214 -175435369 + AluSp SINE Alu 14 313 0 1301 239 121 30 chr2 77821214 77821332 -175435251 - L1MC5 LINE L1 -449 7512 7299 2593 53 0 0 chr2 77821342 77821643 -175434940 - AluY SINE Alu -10 301 1 880 184 15 15 chr2 77821787 77821983 -175434600 + L1MD3 LINE L1 7790 7985 -10 21 0 0 0 chr2 77822146 77822167 -175434416 + AT_rich Low_complexity Low_complexity 1 21 0 1597 163 187 42 chr2 77823460 77823866 -175432717 - MLT1C LTR MaLR 0 467 3 337 329 70 7 chr2 77824094 77824237 -175432346 - MER5B DNA MER1_type -1 177 26 769 283 121 49 chr2 77824721 77825174 -175431409 + HAL1 LINE L1 371 856 -1651 1197 258 95 42 chr2 77825189 77825778 -175430805 + HAL1 LINE L1 1413 2032 -475 923 204 113 28 chr2 77825780 77826099 -175430484 + HAL1 LINE L1 1877 2222 -285 923 179 87 10 chr2 77826099 77826294 -175430289 + LTR50 LTR ERVL 1 210 -585 255 234 0 16 chr2 77826317 77826381 -175430202 - L2 LINE L2 0 3313 3251 1888 145 40 10 chr2 77826520 77826817 -175429766 - AluSx SINE Alu -6 306 1 2013 150 0 3 chr2 77826823 77827130 -175429453 - AluSx SINE Alu -4 308 3 35 0 0 0 chr2 77827132 77827167 -175429416 + AT_rich Low_complexity Low_complexity 1 35 0 1412 213 28 14 chr2 77827167 77827449 -175429134 - AluJo SINE Alu -26 286 1 1585 165 5 97 chr2 77827449 77827891 -175428692 - L1MA4 LINE L1 0 6482 6082 7789 170 37 20 chr2 77827894 77829427 -175427156 - L1MA4 LINE L1 -957 5371 3865 318 26 0 0 chr2 77829427 77829466 -175427117 + (TTG)n Simple_repeat Simple_repeat 2 40 0 7789 170 37 20 chr2 77829466 77829822 -175426761 - L1MA4 LINE L1 -2463 3865 3516 2329 97 0 16 chr2 77829822 77830130 -175426453 + AluSg SINE Alu 1 303 -7 7789 170 37 20 chr2 77830130 77830342 -175426241 - L1MA4 LINE L1 -2812 3516 3309 2125 135 0 22 chr2 77830342 77830660 -175425923 - AluSx SINE Alu -1 311 1 7789 170 37 20 chr2 77830660 77831666 -175424917 - L1MA4 LINE L1 -3019 3309 24 183 315 28 37 chr2 77831772 77831880 -175424703 - L2 LINE L2 -314 2958 2852 1184 137 69 50 chr2 77832047 77832309 -175424274 + L1MD3 LINE L1 7729 7995 0 225 0 0 0 chr2 77832960 77832985 -175423598 + (A)n Simple_repeat Simple_repeat 1 25 0 248 274 0 0 chr2 77833276 77833327 -175423256 + polypurine Low_complexity Low_complexity 1 51 0 24 0 0 0 chr2 77833811 77833835 -175422748 + AT_rich Low_complexity Low_complexity 1 24 0 2258 82 0 4 chr2 77833838 77834190 -175422393 + AluY SINE Alu 1 351 0 352 264 247 17 chr2 77834213 77834387 -175422196 + MIR SINE MIR 40 253 -9 627 291 80 0 chr2 77835081 77835280 -175421303 - LTR16A LTR ERVL -38 412 198 2523 259 154 37 chr2 77836393 77837969 -175418614 - HAL1 LINE L1 0 2507 748 597 204 145 0 chr2 77837972 77838124 -175418459 + MER20B DNA MER1_type 3 176 -607 439 176 69 10 chr2 77838132 77838234 -175418349 - MER53 DNA DNA 0 189 82 969 240 21 12 chr2 77838270 77838512 -175418071 + MER20B DNA MER1_type 198 441 -342 553 248 98 0 chr2 77838715 77838929 -175417654 + MER20B DNA MER1_type 516 750 -33 533 205 23 70 chr2 77838946 77839013 -175417570 + L1ME1 LINE L1 5840 5909 -257 1430 158 3 107 chr2 77839013 77839330 -175417253 + AluY SINE Alu 1 284 -27 533 205 23 70 chr2 77839330 77839433 -175417150 + L1ME1 LINE L1 5909 6002 -164 706 191 19 13 chr2 77839444 77839601 -175416982 + L1MA10 LINE L1 6175 6332 -2 593 276 30 57 chr2 77839677 77839942 -175416641 - HAL1 LINE L1 -1777 730 473 468 302 132 0 chr2 77840438 77840643 -175415940 - MIR SINE MIR 0 262 31 393 287 22 55 chr2 77840871 77841052 -175415531 + MIR3 SINE MIR 30 204 -4 213 296 161 44 chr2 77842096 77842437 -175414146 + L2 LINE L2 1726 2106 -1208 2056 112 46 0 chr2 77842612 77842897 -175413686 + AluSx SINE Alu 1 298 -14 222 282 19 115 chr2 77843075 77843231 -175413352 + L2 LINE L2 2910 3050 -222 526 269 50 0 chr2 77843259 77843419 -175413164 + MIR SINE MIR 95 262 0 229 261 80 0 chr2 77844210 77844298 -175412285 - MIR SINE MIR -77 131 37 458 191 110 29 chr2 77845057 77845193 -175411390 + Charlie8 DNA MER1_type 2 148 -2269 503 284 96 20 chr2 77845499 77845696 -175410887 - MIR SINE MIR -20 242 31 525 279 42 0 chr2 77846227 77846392 -175410191 + MER91A DNA MER1_type 1 172 -24 225 229 52 73 chr2 77846395 77846491 -175410092 + MER91A DNA MER1_type 103 196 0 2320 97 0 0 chr2 77848683 77849009 -175407574 - AluSx SINE Alu 0 312 1 2517 213 70 58 chr2 77850322 77851011 -175405572 - MER21B LTR ERV1 -107 756 60 2352 95 0 0 chr2 77851204 77851499 -175405084 + AluSg SINE Alu 1 295 -15 298 260 22 0 chr2 77851523 77851609 -175404974 - MLT1J1 LTR MaLR -306 140 64 244 212 30 15 chr2 77851609 77851675 -175404908 - MLT1L LTR MaLR -533 82 16 2685 55 0 0 chr2 77851977 77852288 -175404295 + AluY SINE Alu 1 311 0 955 206 57 0 chr2 77853072 77853281 -175403302 + MIR SINE MIR 30 250 -12 306 315 62 62 chr2 77853454 77853714 -175402869 + HAL1 LINE L1 946 1205 -1302 2223 109 17 0 chr2 77853937 77854230 -175402353 + AluSg SINE Alu 1 298 -12 241 281 31 0 chr2 77854646 77854710 -175401873 + L1ME LINE L1 561 626 -5493 235 250 0 0 chr2 77854726 77854778 -175401805 + L1ME LINE L1 2396 2447 -3682 252 284 23 0 chr2 77854787 77854875 -175401708 + L1ME LINE L1 2912 3001 -3128 27 49 0 0 chr2 77854901 77854942 -175401641 + AT_rich Low_complexity Low_complexity 1 41 0 245 183 42 0 chr2 77855259 77855330 -175401253 + (TA)n Simple_repeat Simple_repeat 1 74 0 946 290 55 26 chr2 77855365 77855758 -175400825 + L1ME LINE L1 4716 5096 -1033 1616 169 91 62 chr2 77855758 77855978 -175400605 - MSTD LTR MaLR 0 396 159 1847 146 7 36 chr2 77855978 77856287 -175400296 - AluJb SINE Alu -12 300 1 1616 169 91 62 chr2 77856287 77856451 -175400132 - MSTD LTR MaLR -237 159 1 946 290 55 26 chr2 77856451 77856514 -175400069 + L1ME LINE L1 5096 5156 -973 2405 110 0 0 chr2 77856514 77856824 -175399759 + AluSq SINE Alu 3 312 -1 946 290 55 26 chr2 77856824 77856894 -175399689 + L1ME LINE L1 5156 5258 -871 249 243 57 0 chr2 77856908 77856978 -175399605 - L1ME LINE L1 -546 5624 5551 307 271 46 26 chr2 77857155 77857306 -175399277 + HAL1b LINE L1 66 219 -1129 * 546 159 111 40 chr2 77857302 77857421 -175399162 + L1ME LINE L1 5549 5679 -470 2313 114 0 0 chr2 77857421 77857718 -175398865 + AluSg SINE Alu 1 297 -13 28 48 0 0 chr2 77857848 77857890 -175398693 + AT_rich Low_complexity Low_complexity 1 42 0 697 171 0 0 chr2 77858070 77858175 -175398408 - MER58B DNA MER1_type -18 323 219 23 33 0 0 chr2 77858567 77858597 -175397986 + AT_rich Low_complexity Low_complexity 1 30 0 3970 59 4 0 chr2 77858655 77859150 -175397433 - L1PA5 LINE L1 0 6154 5658 267 246 18 0 chr2 77859534 77859591 -175396992 + GA-rich Low_complexity Low_complexity 1 58 0 247 283 71 0 chr2 77860535 77860634 -175395949 + L2 LINE L2 1602 1707 -1607 433 239 91 6 chr2 77860679 77860855 -175395728 + L2 LINE L2 3119 3309 -4 452 247 0 0 chr2 77861015 77861104 -175395479 - MER117 DNA MER1_type 0 197 109 2323 94 3 31 chr2 77862289 77862608 -175393975 + AluSg SINE Alu 1 310 0 249 245 170 0 chr2 77863039 77863133 -175393450 - MIR SINE MIR -141 121 12 251 268 134 0 chr2 77863353 77863450 -175393133 - MER20B DNA MER1_type -640 143 34 268 295 126 0 chr2 77863491 77863586 -175392997 + L2 LINE L2 3150 3256 -16 549 238 58 94 chr2 77865456 77865679 -175390904 - MER102b DNA MER1_type 0 341 127 238 158 53 35 chr2 77866051 77866108 -175390475 + MLT1G LTR MaLR 1 58 -509 2419 65 17 0 chr2 77866115 77866405 -175390178 + AluSp SINE Alu 1 295 -18 2205 84 16 10 chr2 77866430 77866558 -175390025 + L1MA1 LINE L1 5991 6117 -185 2098 115 10 10 chr2 77866558 77866853 -175389730 + AluSq SINE Alu 1 295 -18 2205 84 16 10 chr2 77866853 77867034 -175389549 + L1MA1 LINE L1 6117 6302 0 1028 251 133 25 chr2 77867058 77867493 -175389090 + MLT1G LTR MaLR 91 572 -18 226 299 0 35 chr2 77868092 77868179 -175388404 + L2 LINE L2 3189 3272 0 21 0 0 0 chr2 77868644 77868665 -175387918 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 77868712 77868735 -175387848 + AT_rich Low_complexity Low_complexity 1 23 0 520 291 51 5 chr2 77869441 77869637 -175386946 + MIR SINE MIR 52 256 -6 214 329 24 12 chr2 77870064 77870146 -175386437 + MIR SINE MIR 5 87 -175 222 116 0 0 chr2 77870176 77870219 -175386364 + (ATG)n Simple_repeat Simple_repeat 1 43 0 323 246 103 8 chr2 77870419 77870484 -175386099 - L1ME4a LINE L1 -1 6120 6063 2363 71 3 23 chr2 77870484 77870793 -175385790 + AluY SINE Alu 1 303 -8 323 246 103 8 chr2 77870793 77870853 -175385730 - L1ME4a LINE L1 -58 6063 5983 589 251 102 0 chr2 77871020 77871187 -175385396 + MER5A DNA MER1_type 5 188 -1 1850 181 0 23 chr2 77871208 77871517 -175385066 + AluJb SINE Alu 3 304 -8 2317 108 0 0 chr2 77871519 77871897 -175384686 + AluSg SINE Alu 1 378 0 226 379 68 44 chr2 77872512 77872895 -175383688 + L3 LINE CR1 35 426 -1151 * 281 200 0 0 chr2 77872889 77872944 -175383639 + L2 LINE L2 3259 3313 0 193 347 20 0 chr2 77873117 77873215 -175383368 + L3 LINE CR1 652 751 -826 476 250 41 41 chr2 77873251 77873447 -175383136 - L1ME4a LINE L1 -2 6119 5924 772 216 28 6 chr2 77873586 77873762 -175382821 - MIR SINE MIR -26 236 57 228 219 16 47 chr2 77873941 77874005 -175382578 - MER5B DNA MER1_type 0 178 117 2628 40 0 0 chr2 77874007 77874307 -175382276 + AluY SINE Alu 1 300 -11 2575 47 0 22 chr2 77874320 77874638 -175381945 + AluY SINE Alu 1 311 0 2493 86 0 0 chr2 77874655 77874956 -175381627 + AluSc SINE Alu 1 301 -8 194 282 14 14 chr2 77874975 77875046 -175381537 + MER5B DNA MER1_type 62 132 -46 2668 67 30 6 chr2 77875061 77875422 -175381161 - L1PA8 LINE L1 -3 6169 5800 1189 123 11 0 chr2 77875582 77875761 -175380822 + L1MB3 LINE L1 6001 6181 -2 1329 247 86 55 chr2 77875769 77876050 -175380533 + L1MC4a LINE L1 5174 5445 -701 1694 112 131 22 chr2 77876050 77876318 -175380265 + AluSg SINE Alu 1 297 -13 1329 247 86 55 chr2 77876318 77876556 -175380027 + L1MC4a LINE L1 5445 5193 -953 2164 113 3 3 chr2 77876556 77876857 -175379726 + AluSx SINE Alu 1 301 -11 1329 247 86 55 chr2 77876857 77877064 -175379519 + L1MC4a LINE L1 5192 5391 -755 2597 58 0 0 chr2 77877241 77877549 -175379034 + AluY SINE Alu 1 308 -3 331 239 192 23 chr2 77878353 77878483 -175378100 + MARNA DNA Mariner 258 409 -177 471 262 67 13 chr2 77879561 77879710 -175376873 + MIR3 SINE MIR 3 159 -49 265 265 83 45 chr2 77879711 77879843 -175376740 + MER5A DNA MER1_type 1 137 -52 236 257 86 0 chr2 77880305 77880375 -175376208 - L2 LINE L2 0 3272 3197 2073 141 36 33 chr2 77880515 77880878 -175375705 + THE1B LTR MaLR 1 364 0 340 294 32 8 chr2 77881255 77881381 -175375202 - L2 LINE L2 -218 3054 2926 1488 288 79 35 chr2 77881666 77882823 -175373760 - L1ME LINE L1 -4470 1791 530 833 336 41 17 chr2 77883065 77883350 -175373233 - L1ME LINE L1 -5607 463 163 2444 91 0 0 chr2 77883350 77883658 -175372925 - AluY SINE Alu -3 308 1 833 336 41 17 chr2 77883658 77883789 -175372794 - L1ME LINE L1 -5907 163 37 286 316 110 14 chr2 77885181 77885399 -175371184 - L2 LINE L2 -833 2481 2243 476 288 8 0 chr2 77885565 77885683 -175370900 + MIR SINE MIR 35 153 -55 2404 42 0 14 chr2 77886121 77886436 -175370147 - AluY SINE Alu 0 311 1 8381 163 41 22 chr2 77886498 77886627 -175369956 - L1PA16 LINE L1 -9 6157 6032 2607 61 0 0 chr2 77886627 77886938 -175369645 - AluY SINE Alu 0 311 1 8381 163 41 22 chr2 77886938 77889471 -175367112 - L1PA16 LINE L1 -134 6032 3444 1660 269 130 11 chr2 77889746 77890307 -175366276 - MLT2E LTR ERVL 0 628 1 2188 119 30 0 chr2 77890884 77891187 -175365396 - AluSx SINE Alu 0 312 1 1684 184 28 21 chr2 77891191 77891518 -175365065 - MER58B DNA MER1_type -12 329 1 1846 71 12 0 chr2 77891546 77891786 -175364797 - MER75B DNA T2_type 0 243 1 2198 59 59 0 chr2 77891803 77892075 -175364508 + AluSg SINE Alu 1 288 -22 2748 42 0 0 chr2 77892075 77892386 -175364197 + AluY SINE Alu 1 311 0 794 116 70 8 chr2 77892454 77892583 -175364000 - LTR7 LTR ERV1 -313 137 1 2627 56 0 0 chr2 77893060 77893365 -175363218 + AluY SINE Alu 1 305 -6 357 162 8 120 chr2 77893441 77893558 -175363025 + L1MB4 LINE L1 6076 6179 -1 1703 116 5 0 chr2 77893799 77894023 -175362560 - AluSx SINE Alu -87 225 1 234 0 0 0 chr2 77894084 77894110 -175362473 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 7077 34 3 3 chr2 77894183 77895104 -175361479 - L1PA3 LINE L1 0 6155 5286 514 51 13 13 chr2 77895445 77895524 -175361059 + (TTTA)n Simple_repeat Simple_repeat 2 80 0 6754 60 19 49 chr2 77895524 77897488 -175359095 - SVA Other Other -520 1367 1 5666 27 0 0 chr2 77897494 77898160 -175358423 - L1P LINE L1 -779 5367 4702 1936 124 10 49 chr2 77898161 77898331 -175358252 - AluSx SINE Alu -17 295 141 2350 85 13 0 chr2 77898331 77898637 -175357946 - AluSp SINE Alu -2 311 2 1936 124 10 49 chr2 77898637 77898772 -175357811 - AluSx SINE Alu -171 141 2 611 267 23 0 chr2 77899012 77899184 -175357399 + MER5A DNA MER1_type 9 184 -5 771 244 117 79 chr2 77899449 77899587 -175356996 - L2 LINE L2 0 3313 3182 2234 94 0 70 chr2 77899587 77899918 -175356665 + AluSc SINE Alu 1 308 -1 771 244 117 79 chr2 77899918 77900051 -175356532 - L2 LINE L2 -131 3182 3055 2412 75 0 0 chr2 77900051 77900345 -175356238 + AluY SINE Alu 1 294 -17 2494 69 0 7 chr2 77900353 77900658 -175355925 + AluSx SINE Alu 1 303 -9 771 244 117 79 chr2 77900658 77900932 -175355651 - L2 LINE L2 -264 3049 2732 2167 196 83 8 chr2 77900932 77901402 -175355181 - MLT1D LTR MaLR 0 505 1 771 244 117 79 chr2 77901402 77901510 -175355073 - L2 LINE L2 -581 2732 2629 2181 133 7 65 chr2 77901585 77901998 -175354585 + MLT1B LTR MaLR 1 389 -1 188 247 157 34 chr2 77902003 77902092 -175354491 - L3 LINE CR1 -1123 454 355 659 136 34 0 chr2 77902140 77902258 -175354325 + L1ME1 LINE L1 5152 5273 -873 6153 142 19 3 chr2 77902265 77903989 -175352594 + L1PB3 LINE L1 4403 6153 -1 2702 211 73 15 chr2 77903947 77904629 -175351954 + L1ME1 LINE L1 5270 5991 -175 * 2213 58 72 0 chr2 77904658 77904935 -175351648 + AluSp SINE Alu 1 297 -16 833 228 33 5 chr2 77905534 77905718 -175350865 + MER5A DNA MER1_type 1 189 0 343 137 0 0 chr2 77906459 77906510 -175350073 - MER45C DNA AcHobo -1 952 902 572 260 91 126 chr2 77906527 77906923 -175349660 - MER45C DNA AcHobo -354 599 218 4807 182 61 29 chr2 77906989 77907687 -175348896 + MER45B DNA AcHobo 2 676 -905 2406 53 7 11 chr2 77907687 77907994 -175348589 + AluY SINE Alu 1 306 0 4807 182 61 29 chr2 77907994 77908062 -175348521 + MER45B DNA AcHobo 676 740 -841 2358 103 0 0 chr2 77908062 77908364 -175348219 + AluSg SINE Alu 2 303 -7 4807 182 61 29 chr2 77908364 77908602 -175347981 + MER45B DNA AcHobo 740 1040 0 559 262 82 61 chr2 77908801 77908985 -175347598 + L1ME4a LINE L1 5689 5868 -253 2238 67 18 7 chr2 77908985 77909287 -175347296 - AluY SINE Alu 0 305 1 559 262 82 61 chr2 77909287 77909363 -175347220 + L1ME4a LINE L1 5868 5941 -180 2136 140 0 0 chr2 77909363 77909663 -175346920 + AluSp SINE Alu 1 300 -13 559 262 82 61 chr2 77909663 77909812 -175346771 + L1ME4a LINE L1 5941 6109 -12 2404 84 7 0 chr2 77909887 77910186 -175346397 - AluSp SINE Alu -12 301 1 608 144 10 10 chr2 77910194 77910298 -175346285 + MLT2D LTR ERVL 88 191 -223 2468 60 0 17 chr2 77910311 77910611 -175345972 + AluY SINE Alu 1 295 -16 195 237 25 119 chr2 77911205 77911323 -175345260 - L2 LINE L2 -11 3261 3155 387 0 0 0 chr2 77911332 77911375 -175345208 + (CA)n Simple_repeat Simple_repeat 2 44 0 1643 95 0 0 chr2 77912507 77912728 -175343855 - L1PA12 LINE L1 -1 6167 5947 1881 229 55 39 chr2 77912807 77913084 -175343499 - LTR40a LTR ERVL 0 519 229 1931 150 3 0 chr2 77913084 77913377 -175343206 + AluJb SINE Alu 1 294 -18 1881 229 55 39 chr2 77913377 77913610 -175342973 - LTR40a LTR ERVL -290 229 1 1185 293 101 8 chr2 77915099 77915605 -175340978 + L2 LINE L2 2156 2708 -606 1260 200 118 23 chr2 77915608 77915913 -175340670 - MER2 DNA MER2_type -7 338 5 2171 135 42 3 chr2 77915926 77916259 -175340324 - MER7A DNA MER2_type 0 346 3 360 0 0 0 chr2 77916265 77916305 -175340278 + (CA)n Simple_repeat Simple_repeat 2 41 0 404 288 65 85 chr2 77916487 77916887 -175339696 + L2 LINE L2 2921 3312 -1 262 178 104 133 chr2 77918013 77918082 -175338501 - L1MC/D LINE L1 -1908 5900 5835 2337 110 0 0 chr2 77918082 77918382 -175338201 - AluSx SINE Alu -12 300 1 262 178 104 133 chr2 77918382 77918447 -175338136 - L1MC/D LINE L1 -1973 5835 5770 794 116 70 8 chr2 77919000 77919129 -175337454 + LTR7 LTR ERV1 1 137 -313 2748 42 0 0 chr2 77919197 77919508 -175337075 - AluY SINE Alu 0 311 1 2144 66 59 0 chr2 77919508 77919780 -175336803 - AluSg SINE Alu -22 288 1 1846 71 12 0 chr2 77919797 77920037 -175336546 + MER75B DNA T2_type 1 243 0 1684 184 28 21 chr2 77920065 77920392 -175336191 + MER58B DNA MER1_type 1 329 -12 2188 119 30 0 chr2 77920396 77920699 -175335884 + AluSx SINE Alu 1 312 0 1660 269 130 11 chr2 77921276 77921837 -175334746 + MLT2E LTR ERVL 1 628 0 8381 164 41 22 chr2 77922112 77924645 -175331938 + L1PA16 LINE L1 3444 6032 -134 2580 64 0 0 chr2 77924645 77924956 -175331627 + AluY SINE Alu 1 311 0 8381 164 41 22 chr2 77924956 77925085 -175331498 + L1PA16 LINE L1 6032 6157 -9 2224 67 18 7 chr2 77925147 77925449 -175331134 + AluY SINE Alu 1 305 0 426 224 58 46 chr2 77925456 77925660 -175330923 - L1ME4a LINE L1 -253 5868 5664 4801 181 60 30 chr2 77925833 77926071 -175330512 - MER45B DNA AcHobo -541 1040 811 2130 117 7 0 chr2 77926071 77926369 -175330214 - AluSg SINE Alu -7 303 4 4801 181 60 30 chr2 77926369 77926438 -175330145 - MER45B DNA AcHobo -770 811 746 2273 64 11 11 chr2 77926438 77926744 -175329839 - AluY SINE Alu 0 306 1 4801 181 60 30 chr2 77926744 77927442 -175329141 - MER45B DNA AcHobo -835 746 2 572 260 91 126 chr2 77927508 77927904 -175328679 + MER45C DNA AcHobo 218 599 -354 343 137 0 0 chr2 77927921 77927972 -175328611 + MER45C DNA AcHobo 902 952 -1 833 228 33 5 chr2 77928713 77928897 -175327686 - MER5A DNA MER1_type 0 189 1 2213 58 72 0 chr2 77929496 77929773 -175326810 - AluSp SINE Alu -16 297 1 2729 204 79 5 chr2 77929802 77930435 -175326148 - L1ME1 LINE L1 -175 5991 5312 2525 181 4 6 chr2 77930442 77930916 -175325667 - L1PB3 LINE L1 -1 6153 5681 4772 161 26 6 chr2 77931025 77932283 -175324300 - L1PB3 LINE L1 -468 5686 4403 659 136 34 0 chr2 77932290 77932408 -175324175 - L1ME1 LINE L1 -873 5273 5152 188 247 157 34 chr2 77932456 77932545 -175324038 + L3 LINE CR1 355 454 -1123 2181 133 7 65 chr2 77932550 77932963 -175323620 - MLT1B LTR MaLR -1 389 1 707 265 124 18 chr2 77933038 77933146 -175323437 + L2 LINE L2 2629 2724 -589 2158 196 83 8 chr2 77933146 77933616 -175322967 + MLT1D LTR MaLR 1 505 0 707 265 124 18 chr2 77933616 77933882 -175322701 + L2 LINE L2 2724 3038 -275 2442 69 3 7 chr2 77933890 77934194 -175322389 - AluSx SINE Alu -9 303 1 2575 47 0 22 chr2 77934211 77934529 -175322054 - AluY SINE Alu 0 311 1 2628 40 0 0 chr2 77934542 77934842 -175321741 - AluY SINE Alu -11 300 1 228 219 16 47 chr2 77934844 77934908 -175321675 + MER5B DNA MER1_type 117 178 0 772 216 28 6 chr2 77935087 77935263 -175321320 + MIR SINE MIR 57 236 -26 476 250 41 41 chr2 77935402 77935598 -175320985 + L1ME4a LINE L1 5924 6119 -2 193 347 20 0 chr2 77935634 77935732 -175320851 - L3 LINE CR1 -826 751 652 281 200 0 0 chr2 77935905 77935960 -175320623 - L2 LINE L2 0 3313 3259 227 379 68 44 chr2 77935954 77936337 -175320246 - L3 LINE CR1 -1151 426 35 * 2255 114 0 0 chr2 77936952 77937330 -175319253 - AluSg SINE Alu 0 378 1 1850 181 0 23 chr2 77937332 77937641 -175318942 - AluJb SINE Alu -8 304 3 589 251 102 0 chr2 77937662 77937829 -175318754 - MER5A DNA MER1_type -1 188 5 323 246 103 8 chr2 77937996 77938056 -175318527 + L1ME4a LINE L1 5983 6036 -85 2363 71 3 23 chr2 77938056 77938365 -175318218 - AluY SINE Alu -8 303 1 323 246 103 8 chr2 77938365 77938430 -175318153 + L1ME4a LINE L1 6036 6120 -1 222 116 0 0 chr2 77938630 77938673 -175317910 + (CAT)n Simple_repeat Simple_repeat 1 43 0 214 329 24 12 chr2 77938703 77938785 -175317798 - MIR SINE MIR -175 87 5 520 291 51 5 chr2 77939212 77939408 -175317175 - MIR SINE MIR -6 256 52 23 0 0 0 chr2 77940114 77940137 -175316446 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 77940184 77940205 -175316378 + AT_rich Low_complexity Low_complexity 1 21 0 226 299 0 35 chr2 77940670 77940757 -175315826 - L2 LINE L2 0 3272 3189 1028 251 133 25 chr2 77941356 77941791 -175314792 - MLT1G LTR MaLR -18 572 91 2205 84 16 10 chr2 77941815 77941996 -175314587 - L1MA1 LINE L1 0 6302 6117 2098 115 10 10 chr2 77941996 77942291 -175314292 - AluSq SINE Alu -18 295 1 2205 84 16 10 chr2 77942291 77942419 -175314164 - L1MA1 LINE L1 -185 6117 5991 2419 65 17 0 chr2 77942444 77942734 -175313849 - AluSp SINE Alu -18 295 1 238 158 53 35 chr2 77942741 77942798 -175313785 - MLT1G LTR MaLR -509 58 1 549 238 58 94 chr2 77943170 77943393 -175313190 + MER102b DNA MER1_type 127 341 0 268 295 126 0 chr2 77945263 77945358 -175311225 - L2 LINE L2 -16 3256 3150 251 268 134 0 chr2 77945399 77945496 -175311087 + MER20B DNA MER1_type 34 143 -640 249 245 170 0 chr2 77945716 77945810 -175310773 + MIR SINE MIR 12 121 -141 2323 94 3 31 chr2 77946241 77946560 -175310023 - AluSg SINE Alu 0 310 1 452 247 0 0 chr2 77947745 77947834 -175308749 + MER117 DNA MER1_type 109 197 0 433 239 91 6 chr2 77947994 77948170 -175308413 - L2 LINE L2 -4 3309 3119 247 283 71 0 chr2 77948215 77948314 -175308269 - L2 LINE L2 -1607 1707 1602 267 246 18 0 chr2 77949257 77949314 -175307269 + CT-rich Low_complexity Low_complexity 1 58 0 3970 59 4 0 chr2 77949698 77950193 -175306390 + L1PA5 LINE L1 5658 6154 0 23 33 0 0 chr2 77950251 77950281 -175306302 + AT_rich Low_complexity Low_complexity 1 30 0 595 133 0 0 chr2 77950692 77950775 -175305808 + MER58B DNA MER1_type 241 323 -18 28 48 0 0 chr2 77950955 77950997 -175305586 + AT_rich Low_complexity Low_complexity 1 42 0 2313 114 0 0 chr2 77951127 77951424 -175305159 - AluSg SINE Alu -13 297 1 546 159 111 40 chr2 77951424 77951543 -175305040 - L1ME LINE L1 -470 5696 5566 307 271 46 26 chr2 77951539 77951690 -175304893 - HAL1b LINE L1 -1129 219 66 * 249 243 57 0 chr2 77951867 77951937 -175304646 + L1ME LINE L1 5551 5624 -546 232 216 0 0 chr2 77952091 77952128 -175304455 + MER30 DNA MER1_type 194 230 0 29 0 0 0 chr2 77953069 77953098 -175303485 + AT_rich Low_complexity Low_complexity 1 29 0 2274 112 3 0 chr2 77953120 77953423 -175303160 - AluSx SINE Alu -8 304 1 1682 154 55 7 chr2 77953433 77953706 -175302877 - AluJb SINE Alu -26 286 1 689 219 71 0 chr2 77954070 77954225 -175302358 - MLT1I LTR MaLR 0 409 244 562 226 36 7 chr2 77954273 77954410 -175302173 - MLT1I LTR MaLR -268 141 1 872 254 123 66 chr2 77955184 77955324 -175301259 + MLT1L LTR MaLR 3 134 -481 850 222 106 0 chr2 77955324 77955522 -175301061 - MER20 DNA MER1_type 0 219 1 872 254 123 66 chr2 77955522 77955957 -175300626 + MLT1L LTR MaLR 134 611 -4 622 176 17 11 chr2 77956350 77956483 -175300100 - MER5B DNA MER1_type -3 175 59 498 283 71 77 chr2 77956711 77957010 -175299573 - L1MC4a LINE L1 -1846 5962 5662 2437 76 0 3 chr2 77957010 77957311 -175299272 + AluY SINE Alu 1 300 -11 498 283 71 77 chr2 77957311 77957359 -175299224 - L1MC4a LINE L1 -2146 5662 5615 2446 100 6 0 chr2 77957359 77957670 -175298913 + AluSq SINE Alu 1 313 0 498 283 71 77 chr2 77957670 77957760 -175298823 - L1MC4a LINE L1 -2193 5615 5527 537 274 71 7 chr2 77957899 77958121 -175298462 - L1MC4a LINE L1 -694 5462 5284 225 0 0 0 chr2 77958270 77958295 -175298288 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1682 174 0 23 chr2 77958620 77958919 -175297664 - AluJo SINE Alu -20 292 1 272 128 0 0 chr2 77958947 77958986 -175297597 - MER5B DNA MER1_type -114 64 26 193 103 35 0 chr2 77958960 77958989 -175297594 + MER5A DNA MER1_type 138 167 -22 * 2367 70 0 33 chr2 77959025 77959327 -175297256 + AluY SINE Alu 5 296 -15 670 164 97 30 chr2 77959362 77959527 -175297056 - MER97a DNA MER1_type? -711 183 8 1935 119 0 0 chr2 77959965 77960225 -175296358 - AluSx SINE Alu -9 303 44 1044 322 72 29 chr2 77960839 77961354 -175295229 + LTR67 LTR ERVL 2 538 -19 2297 82 3 3 chr2 77962261 77962554 -175294029 - AluY SINE Alu -18 293 1 2042 143 4 0 chr2 77963069 77963383 -175293200 + AluSx SINE Alu 1 315 0 214 261 91 11 chr2 77963431 77963519 -175293064 - L2 LINE L2 -667 2647 2553 467 279 81 17 chr2 77963613 77963785 -175292798 - L2 LINE L2 -4 3309 3127 2043 143 10 37 chr2 77963831 77964180 -175292403 + MER66B LTR ERV1 1 404 -82 2390 40 20 30 chr2 77964180 77964478 -175292105 - AluY SINE Alu -15 296 2 2043 143 10 37 chr2 77964478 77964559 -175292024 + MER66B LTR ERV1 404 486 0 282 319 69 12 chr2 77964560 77964720 -175291863 - L2 LINE L2 -236 3036 2868 1211 300 122 40 chr2 77964738 77965491 -175291092 - L2 LINE L2 -732 2582 1768 783 153 8 0 chr2 77965492 77965610 -175290973 + FLAM_A SINE Alu 16 134 -8 447 228 72 14 chr2 77966126 77966214 -175290369 + MIR SINE MIR 15 96 -143 1875 145 0 14 chr2 77966214 77966497 -175290086 - AluJo SINE Alu -20 292 14 447 228 72 14 chr2 77966497 77966571 -175290012 + MIR SINE MIR 96 184 -55 31 26 0 0 chr2 77966886 77966924 -175289659 + GC_rich Low_complexity Low_complexity 1 38 0 220 226 38 0 chr2 77968570 77968623 -175287960 + G-rich Low_complexity Low_complexity 2 56 0 670 221 120 37 chr2 77970038 77970255 -175286328 - MIR SINE MIR -20 242 8 2317 108 0 0 chr2 77970639 77970945 -175285638 - AluSc SINE Alu -3 306 1 2557 68 0 0 chr2 77971500 77971809 -175284774 - AluY SINE Alu -2 309 1 2409 86 14 0 chr2 77972631 77972923 -175283660 - AluSc SINE Alu -13 296 1 2241 92 3 16 chr2 77972923 77973229 -175283354 - AluY SINE Alu -8 303 2 2519 57 0 38 chr2 77973558 77973876 -175282707 + AluY SINE Alu 2 307 -4 307 180 33 0 chr2 77974007 77974068 -175282515 - MER20 DNA MER1_type -5 214 152 891 149 4 180 chr2 77974152 77974413 -175282170 + MER20 DNA MER1_type 1 215 -4 221 263 0 18 chr2 77974459 77974516 -175282067 - MIR SINE MIR -102 106 51 657 256 17 80 chr2 77974949 77975187 -175281396 + MIR SINE MIR 33 255 -7 1085 123 94 21 chr2 77975187 77975443 -175281140 + MER47A DNA MER2_type 14 366 0 538 243 148 6 chr2 77976880 77977049 -175279534 - MIR SINE MIR -54 208 16 454 196 117 84 chr2 77977103 77977282 -175279301 - MIR3 SINE MIR -3 205 21 450 307 0 0 chr2 77977382 77977496 -175279087 + MER94 DNA DNA 20 133 -1 190 294 20 0 chr2 77977895 77977946 -175278637 - L2 LINE L2 -12 3301 3250 215 352 66 0 chr2 77977957 77978048 -175278535 - L2 LINE L2 -239 3033 2937 363 308 75 25 chr2 77978153 77978312 -175278271 + L2 LINE L2 3095 3261 -11 841 202 98 40 chr2 77979334 77979611 -175276972 - L1ME3A LINE L1 -79 6091 5799 753 200 60 0 chr2 77979629 77979779 -175276804 - AluJb SINE Alu -14 298 140 1575 182 0 86 chr2 77980367 77980680 -175275903 + AluJo SINE Alu 1 286 -26 696 98 33 33 chr2 77981321 77981443 -175275140 - L1MB4 LINE L1 -6 6174 6053 381 235 25 59 chr2 77983146 77983265 -175273318 - MER5B DNA MER1_type -58 120 6 419 303 67 63 chr2 77983278 77983516 -175273067 + L3 LINE CR1 1314 1552 -25 409 324 34 0 chr2 77985006 77985154 -175271429 + MIR SINE MIR 110 262 0 283 158 92 13 chr2 77985577 77985653 -175270930 + AluJ SINE Alu 55 136 -166 324 247 11 22 chr2 77985818 77985907 -175270676 - L2 LINE L2 -18 3254 3167 2061 127 0 0 chr2 77986206 77986537 -175270046 + AluSx SINE Alu 1 331 0 751 157 144 13 chr2 77986537 77986690 -175269893 + AluJ SINE Alu 132 304 -8 25 51 0 0 chr2 77987061 77987100 -175269483 + AT_rich Low_complexity Low_complexity 1 39 0 258 250 19 23 chr2 77987128 77987233 -175269350 - L1P5 LINE L1 -285 5869 5762 2103 69 44 0 chr2 77987980 77988255 -175268328 - AluSp SINE Alu -23 290 4 322 174 58 0 chr2 77988259 77988328 -175268255 - MER103 DNA DNA -60 106 34 639 216 33 26 chr2 77988350 77988503 -175268080 - FRAM SINE Alu -22 154 1 592 297 34 0 chr2 77989578 77989753 -175266830 - MIR SINE MIR -30 232 52 235 293 43 52 chr2 77990102 77990218 -175266365 + MIR3 SINE MIR 41 155 -53 250 347 32 8 chr2 77990357 77990481 -175266102 + L1ME4a LINE L1 5594 5720 -450 987 131 0 48 chr2 77990481 77990649 -175265934 + AluSg/x SINE Alu 153 312 0 191 255 153 20 chr2 77991348 77991446 -175265137 + MIR SINE MIR 36 146 -116 1646 75 218 4 chr2 77992375 77992614 -175263969 + AluY SINE Alu 1 290 -21 2102 195 72 41 chr2 77992616 77992665 -175263918 - L1ME2 LINE L1 -53 6111 6065 3682 123 37 52 chr2 77992665 77993318 -175263265 + L1PB4 LINE L1 5514 6156 0 2102 195 72 41 chr2 77993318 77993879 -175262704 - L1ME2 LINE L1 -99 6065 5482 2056 106 46 3 chr2 77994116 77994399 -175262184 + AluSx SINE Alu 1 295 -17 422 333 116 10 chr2 77994420 77994618 -175261965 - MIR SINE MIR -10 252 34 219 114 0 0 chr2 77994997 77995032 -175261551 + (ATG)n Simple_repeat Simple_repeat 2 36 0 561 336 43 5 chr2 77995052 77995260 -175261323 - MIR SINE MIR -33 229 14 180 290 65 0 chr2 77995710 77995772 -175260811 - MIR SINE MIR -22 240 175 219 139 0 0 chr2 77995773 77995809 -175260774 + (TG)n Simple_repeat Simple_repeat 2 37 0 362 250 56 56 chr2 77995853 77995997 -175260586 - MIR SINE MIR -97 165 22 606 182 0 0 chr2 77996962 77997061 -175259522 - MER81 DNA DNA -15 99 1 2184 137 0 0 chr2 77997477 77997777 -175258806 - AluSx SINE Alu -12 300 1 354 291 51 29 chr2 77997817 77997992 -175258591 - MIR SINE MIR -71 191 13 415 284 157 10 chr2 77998824 77999028 -175257555 - MIR SINE MIR -3 259 26 1664 121 2 0 chr2 78000115 78000375 -175256208 + L1PB1 LINE L1 5760 6023 -128 468 260 154 12 chr2 78001363 78001532 -175255051 + MIR SINE MIR 50 242 -20 332 255 108 97 chr2 78002127 78002386 -175254197 + L1ME4a LINE L1 5811 6072 -49 813 216 24 42 chr2 78002818 78002962 -175253621 + MER3 DNA MER1_type 1 141 -68 1774 120 38 60 chr2 78002962 78003279 -175253304 - AluSx SINE Alu -2 310 1 813 216 24 42 chr2 78003279 78003347 -175253236 + MER3 DNA MER1_type 141 209 0 189 0 0 0 chr2 78003525 78003546 -175253037 + (T)n Simple_repeat Simple_repeat 1 21 0 755 136 47 94 chr2 78004047 78004238 -175252345 - MER5A DNA MER1_type -1 188 7 338 287 64 24 chr2 78005054 78005254 -175251329 - MIR SINE MIR -49 159 5 1754 179 61 6 chr2 78005734 78006064 -175250519 - MER7A DNA MER2_type 0 346 1 240 163 0 0 chr2 78006697 78006740 -175249843 + GA-rich Low_complexity Low_complexity 1 43 0 2444 80 0 0 chr2 78008298 78008599 -175247984 - AluSx SINE Alu -11 301 1 309 185 0 0 chr2 78011375 78011440 -175245143 + (TG)n Simple_repeat Simple_repeat 1 65 0 287 241 224 0 chr2 78012498 78012614 -175243969 - MER5A DNA MER1_type 0 189 48 263 216 21 52 chr2 78013141 78013238 -175243345 - LTR49-int LTR ERV1 -4950 1381 1288 420 217 0 0 chr2 78013310 78013379 -175243204 - tRNA-Glu-GAG tRNA tRNA 0 75 7 284 233 0 0 chr2 78013403 78013463 -175243120 - LTR49-int LTR ERV1 -5153 1178 1119 390 205 0 13 chr2 78013620 78013698 -175242885 - LTR49-int LTR ERV1 -5411 920 844 1289 193 4 24 chr2 78013750 78013999 -175242584 - LTR49-int LTR ERV1 -6081 250 7 565 99 44 0 chr2 78014110 78014201 -175242382 + LTR48B-int LTR ERV1 3178 3272 -3059 607 217 1 10 chr2 78014253 78014472 -175242111 + LTR48B-int LTR ERV1 3264 3450 -2881 619 197 24 40 chr2 78014657 78014858 -175241725 + LTR48B-int LTR ERV1 1726 2490 -2381 480 205 0 0 chr2 78015003 78015086 -175241497 - AluJ/FLAM SINE Alu -228 84 2 567 202 46 64 chr2 78015093 78015422 -175241161 + LTR48B-int LTR ERV1 1981 3728 -2603 1174 174 63 57 chr2 78015428 78015762 -175240821 + LTR48B-int LTR ERV1 3703 4038 -2293 2232 116 7 0 chr2 78015762 78016064 -175240519 - AluSx SINE Alu -8 304 1 3234 97 9 0 chr2 78016065 78016510 -175240073 - MER41B LTR ERV1 -186 449 1 983 170 126 32 chr2 78016534 78016781 -175239802 + LTR48B-int LTR ERV1 5898 6167 -164 2500 221 73 10 chr2 78016882 78017483 -175239100 + LTR48B LTR ERV1 1 639 -5 1321 158 87 111 chr2 78017927 78018388 -175238195 - LTR7 LTR ERV1 0 450 1 471 344 84 20 chr2 78018388 78018935 -175237648 - L1ME3 LINE L1 -322 5840 5259 1781 172 0 13 chr2 78019298 78019612 -175236971 - AluSg SINE Alu 0 310 1 749 212 78 53 chr2 78020673 78020918 -175235665 - MIR SINE MIR 0 262 12 1136 221 18 0 chr2 78020933 78021150 -175235433 + MER58A DNA MER1_type 4 224 0 367 313 104 10 chr2 78021218 78021419 -175235164 + MIR SINE MIR 2 221 -41 830 154 0 0 chr2 78022406 78022523 -175234060 + FLAM_C SINE Alu 2 118 -25 671 293 33 12 chr2 78022545 78022787 -175233796 - MIR SINE MIR -10 252 6 284 263 116 21 chr2 78023539 78023634 -175232949 - MER103 DNA DNA -49 117 14 309 297 110 6 chr2 78023678 78023860 -175232723 + L1ME4a LINE L1 5669 5869 -252 22 0 0 0 chr2 78024032 78024054 -175232529 + AT_rich Low_complexity Low_complexity 1 22 0 540 288 80 13 chr2 78025026 78025252 -175231331 + MIR SINE MIR 9 249 -13 225 299 122 0 chr2 78025640 78025747 -175230836 - L2 LINE L2 -6 3307 3188 369 0 0 0 chr2 78025770 78025811 -175230772 + (CA)n Simple_repeat Simple_repeat 2 42 0 1111 78 0 0 chr2 78025811 78025952 -175230631 - MER41A LTR ERV1 -113 441 301 321 301 21 42 chr2 78025970 78026113 -175230470 - L2 LINE L2 -188 3125 2986 335 240 2 0 chr2 78027125 78027201 -175229382 - Charlie8 DNA MER1_type -990 1427 1361 217 146 36 18 chr2 78029395 78029450 -175227133 + CT-rich Low_complexity Low_complexity 2 57 0 760 259 80 8 chr2 78029677 78029928 -175226655 - L1ME3A LINE L1 -219 5951 5683 22 35 0 0 chr2 78031607 78031636 -175224947 + AT_rich Low_complexity Low_complexity 1 29 0 408 254 134 19 chr2 78033808 78034019 -175222564 + L1ME LINE L1 5489 5729 -392 532 203 101 7 chr2 78034058 78034196 -175222387 - LTR33A LTR ERVL -8 515 365 470 225 94 14 chr2 78034276 78034414 -175222169 - LTR33A LTR ERVL -342 181 33 1748 154 146 31 chr2 78034944 78035328 -175221255 + MSTA LTR MaLR 1 428 0 1112 166 36 27 chr2 78035484 78035707 -175220876 + LTR48B LTR ERV1 4 228 -416 817 196 15 50 chr2 78035689 78035888 -175220695 + LTR29 LTR ERV1 137 328 -294 * 1553 173 91 63 chr2 78036023 78036410 -175220173 + MLT1F LTR MaLR 161 541 -1 216 284 17 43 chr2 78036468 78036584 -175219999 - L2 LINE L2 -43 3270 3158 198 0 0 0 chr2 78037544 78037566 -175219017 + (CA)n Simple_repeat Simple_repeat 1 22 0 225 196 0 0 chr2 78040814 78040870 -175215713 + (TG)n Simple_repeat Simple_repeat 2 57 0 381 43 0 0 chr2 78041478 78041525 -175215058 + (TG)n Simple_repeat Simple_repeat 2 48 0 2372 113 0 0 chr2 78042119 78042430 -175214153 - AluSx SINE Alu -1 311 1 225 0 0 0 chr2 78043119 78043144 -175213439 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 207 267 35 60 chr2 78043238 78043354 -175213229 - MIR3 SINE MIR -4 204 92 562 275 84 74 chr2 78043474 78043528 -175213055 - L1MC4 LINE L1 0 8042 7990 1181 84 0 7 chr2 78043528 78043683 -175212900 + L1PA8 LINE L1 6006 6159 -13 562 275 84 74 chr2 78043683 78044141 -175212442 - L1MC4 LINE L1 -52 7990 7525 2574 154 9 30 chr2 78044162 78044597 -175211986 + Tigger2a DNA MER2_type 4 429 -5 344 235 0 0 chr2 78045873 78045941 -175210642 - L2 LINE L2 -2 3270 3203 21 0 0 0 chr2 78045983 78046004 -175210579 + AT_rich Low_complexity Low_complexity 1 21 0 822 193 70 6 chr2 78046006 78046177 -175210406 - MLT1A2 LTR MaLR -4 370 189 326 61 20 0 chr2 78046204 78046253 -175210330 + (GA)n Simple_repeat Simple_repeat 2 51 0 648 198 57 21 chr2 78046255 78046431 -175210152 - MLT1B LTR MaLR -198 176 14 1644 168 40 79 chr2 78047128 78047532 -175209051 + MLT1B LTR MaLR 3 390 0 276 295 36 53 chr2 78047870 78048091 -175208492 - MLT1H LTR MaLR -112 297 79 182 342 70 43 chr2 78048216 78048403 -175208180 - L2 LINE L2 -1525 1789 1598 891 210 21 109 chr2 78048451 78048780 -175207803 - LTR41 LTR ERVL -10 763 464 506 167 135 24 chr2 78048894 78049020 -175207563 - LTR41 LTR ERVL -632 141 2 1460 243 33 41 chr2 78049022 78049532 -175207051 + L2 LINE L2 1116 1621 -1693 249 174 0 0 chr2 78049637 78049683 -175206900 - MER53 DNA DNA -141 48 3 243 229 21 0 chr2 78049683 78049724 -175206859 - MER20 DNA MER1_type -177 42 1 789 284 80 53 chr2 78049724 78050090 -175206493 - L1M4 LINE L1 -1806 4340 3950 1417 172 144 6 chr2 78050090 78050409 -175206174 - MLT1A1 LTR MaLR 0 365 3 789 284 80 53 chr2 78050409 78050641 -175205942 - L1M4 LINE L1 -2196 3950 3726 2698 71 17 3 chr2 78050648 78050998 -175205585 - THE1A LTR MaLR 0 355 1 11673 91 19 2 chr2 78050999 78052543 -175204040 - THE1A-int LTR MaLR -1 1579 10 2422 64 32 10 chr2 78052548 78052671 -175203912 - THE1A LTR MaLR -35 320 201 2234 128 7 0 chr2 78052671 78052977 -175203606 + AluSg SINE Alu 1 308 -2 2422 64 32 10 chr2 78052977 78053166 -175203417 - THE1A LTR MaLR -154 201 1 431 299 115 32 chr2 78053197 78053535 -175203048 - L1M4 LINE L1 -2451 3695 3330 * 940 240 190 40 chr2 78053521 78054041 -175202542 - L1MC5 LINE L1 -30 7931 7334 476 265 122 16 chr2 78054047 78054236 -175202347 + LTR1 LTR ERV1 28 236 -549 651 244 133 29 chr2 78054289 78054568 -175202015 + LTR1B LTR ERV1 311 618 -208 249 261 43 43 chr2 78054652 78054767 -175201816 + LTR28 LTR ERV1 905 1019 -1 2505 84 0 3 chr2 78054929 78055239 -175201344 - AluSg SINE Alu -1 309 1 327 264 113 38 chr2 78055247 78055772 -175200811 - L1M4 LINE L1 -2884 3262 2658 269 264 0 14 chr2 78055805 78055877 -175200706 + L1ME4a LINE L1 5981 6051 -70 2080 128 0 0 chr2 78056074 78056392 -175200191 + AluSx SINE Alu 1 318 0 1639 192 7 7 chr2 78057555 78057846 -175198737 - AluJb SINE Alu -21 291 1 1265 258 89 7 chr2 78057850 78058253 -175198330 - L2 LINE L2 -534 2780 2345 2967 203 104 62 chr2 78058322 78059423 -175197160 + L1MC5 LINE L1 6762 7909 -52 266 149 0 60 chr2 78059441 78059508 -175197075 + (GGAAA)n Simple_repeat Simple_repeat 3 65 0 692 307 71 32 chr2 78059510 78060315 -175196268 - L2 LINE L2 -908 2406 1571 2553 231 187 35 chr2 78061466 78062228 -175194355 - L2 LINE L2 -50 3263 2619 947 262 68 38 chr2 78062228 78062267 -175194316 + MLT1I LTR MaLR 1 37 -372 2221 117 3 0 chr2 78062267 78062565 -175194018 - AluSg SINE Alu -11 299 1 947 262 68 38 chr2 78062565 78062922 -175193661 + MLT1I LTR MaLR 37 409 0 2553 231 187 35 chr2 78062922 78063745 -175192838 - L2 LINE L2 -694 2619 1437 281 250 31 10 chr2 78064061 78064157 -175192426 + MIR SINE MIR 136 233 -29 211 347 172 24 chr2 78064303 78064675 -175191908 + L2 LINE L2 2807 3233 -39 1845 96 0 12 chr2 78064848 78065097 -175191486 - AluSx SINE Alu -66 246 1 1953 98 0 0 chr2 78065576 78065840 -175190743 - AluY SINE Alu -16 295 32 361 259 115 11 chr2 78065844 78066018 -175190565 - MIR SINE MIR -40 222 31 310 330 36 0 chr2 78066117 78066229 -175190354 - L2 LINE L2 -19 3294 3179 1738 170 3 11 chr2 78067069 78067351 -175189232 + AluJo SINE Alu 1 280 -32 640 200 22 22 chr2 78067402 78067537 -175189046 - MER45A DNA AcHobo -34 144 10 414 0 0 0 chr2 78067656 78067702 -175188881 + (CATCC)n Simple_repeat Simple_repeat 2 47 0 303 135 54 40 chr2 78068023 78068097 -175188486 - MIR SINE MIR -121 141 67 2144 126 20 0 chr2 78068485 78068787 -175187796 - AluSg SINE Alu -2 308 1 2241 113 0 0 chr2 78068883 78069176 -175187407 - AluSx SINE Alu -16 296 4 30 0 0 0 chr2 78069237 78069267 -175187316 + AT_rich Low_complexity Low_complexity 1 30 0 699 254 33 67 chr2 78069305 78069635 -175186948 + L1MC5 LINE L1 7607 7925 -36 568 291 117 3 chr2 78070184 78070483 -175186100 + MER115 DNA AcHobo 38 370 -323 2113 122 0 28 chr2 78071410 78071589 -175184994 - AluSp SINE Alu -1 312 144 2432 82 0 0 chr2 78071589 78071892 -175184691 - AluY SINE Alu -8 303 1 2113 122 0 28 chr2 78071892 78072033 -175184550 - AluSp SINE Alu -169 144 1 1078 221 380 10 chr2 78072130 78072709 -175183874 + LTR50 LTR ERVL 1 793 -2 312 242 0 0 chr2 78073564 78073630 -175182953 - L2 LINE L2 0 3272 3207 1475 218 149 44 chr2 78073721 78074176 -175182407 - MLT1G1 LTR MaLR 0 595 93 1567 291 149 16 chr2 78074245 78075106 -175181477 - L2 LINE L2 -340 2974 2000 1761 155 14 27 chr2 78076681 78076978 -175179605 - AluJb SINE Alu -13 299 7 4738 145 55 18 chr2 78077051 78077999 -175178584 - L1MB7 LINE L1 -57 6127 5144 751 183 0 16 chr2 78078002 78078128 -175178455 + FLAM_C SINE Alu 2 125 -18 1353 215 24 15 chr2 78078128 78078467 -175178116 - L1MB7 LINE L1 -985 5161 4820 401 209 18 9 chr2 78078449 78078559 -175178024 - L1MB7 LINE L1 -1733 4413 4303 * 351 194 45 0 chr2 78078559 78078626 -175177957 + MSTB LTR MaLR 1 70 -356 10860 153 21 29 chr2 78078627 78081866 -175174717 + L1PA15 LINE L1 13 3283 -3178 5604 132 36 24 chr2 78081867 78082077 -175174506 + L1PA15 LINE L1 5290 5496 -984 1813 138 42 39 chr2 78082077 78082388 -175174195 + AluSx SINE Alu 1 312 0 5604 132 36 24 chr2 78082388 78083328 -175173255 + L1PA15 LINE L1 5496 6436 -44 245 263 0 0 chr2 78083644 78083701 -175172882 + (TATATG)n Simple_repeat Simple_repeat 3 59 0 722 176 0 78 chr2 78083716 78083858 -175172725 + MER93b LTR ERV1 1 131 -242 240 214 28 166 chr2 78083898 78084043 -175172540 - LTR28 LTR ERV1 -42 978 854 858 231 70 98 chr2 78084082 78084550 -175172033 - LTR1B LTR ERV1 -333 493 39 1210 133 107 13 chr2 78084561 78084786 -175171797 + MER93b LTR ERV1 128 373 0 1912 180 51 30 chr2 78084954 78085348 -175171235 - MER57A LTR ERV1 -1 402 1 204 40 0 0 chr2 78085671 78085696 -175170887 + (GAAAA)n Simple_repeat Simple_repeat 1 25 0 4300 86 0 5 chr2 78085847 78086403 -175170180 + MER41A LTR ERV1 2 554 0 2121 157 141 35 chr2 78086811 78086936 -175169647 + MER39 LTR ERV1 2 112 -595 4025 170 34 8 chr2 78086936 78087652 -175168931 - MER50 LTR ERV1 0 734 1 2121 157 141 35 chr2 78087652 78087933 -175168650 + MER39 LTR ERV1 112 362 -345 1709 153 64 7 chr2 78087933 78088096 -175168487 - AluJo SINE Alu -15 297 110 405 0 0 0 chr2 78088096 78088141 -175168442 + (TG)n Simple_repeat Simple_repeat 2 46 0 1709 153 64 7 chr2 78088141 78088258 -175168325 - AluJo SINE Alu -202 110 1 2121 157 141 35 chr2 78088258 78088466 -175168117 + MER39 LTR ERV1 362 707 0 353 260 83 78 chr2 78088529 78088733 -175167850 + MIR SINE MIR 58 262 0 748 201 212 16 chr2 78088791 78089219 -175167364 + Charlie1b DNA MER1_type 9 519 -4 1582 147 18 132 chr2 78091898 78092285 -175164298 + MER7A DNA MER2_type 2 342 -4 241 330 11 0 chr2 78092709 78092797 -175163786 - L2 LINE L2 -587 2727 2639 333 248 95 0 chr2 78093187 78093292 -175163291 - HAL1 LINE L1 -147 2360 2246 308 316 112 0 chr2 78093774 78093926 -175162657 - L1ME3A LINE L1 -15 6391 6223 1007 236 140 71 chr2 78094012 78094653 -175161930 - L1ME3A LINE L1 -208 6198 5602 1757 154 54 7 chr2 78094653 78094951 -175161632 - AluSx SINE Alu 0 312 1 1007 236 140 71 chr2 78094951 78096139 -175160444 - L1ME3A LINE L1 -804 5602 4242 2207 104 3 35 chr2 78096242 78096560 -175160023 - AluSx SINE Alu -4 308 1 228 292 0 0 chr2 78096574 78096646 -175159937 - L1ME3A LINE L1 -2538 3844 3773 585 283 114 47 chr2 78096672 78097578 -175159005 - L1M4c LINE L1 -3515 2867 2023 2040 125 11 11 chr2 78097578 78097865 -175158718 - AluSx SINE Alu -25 287 1 585 283 114 47 chr2 78097865 78098688 -175157895 - L1M4c LINE L1 -4359 2023 918 291 225 106 80 chr2 78099489 78099640 -175156943 - HAL1 LINE L1 -1609 898 744 229 161 177 0 chr2 78099648 78099710 -175156873 + SN5 Other centromeric 233 305 -150 563 154 23 23 chr2 78101131 78101261 -175155322 - L1MB8 LINE L1 0 6178 6049 23986 27 3 0 chr2 78101266 78104854 -175151729 - L1PA3 LINE L1 0 6155 2559 535 170 9 27 chr2 78104857 78104969 -175151614 - L1MB8 LINE L1 -254 5930 5821 954 190 26 5 chr2 78104975 78105170 -175151413 - L1MB3 LINE L1 -7 6176 5978 1579 236 59 3 chr2 78105370 78105805 -175150778 - L1MD3 LINE L1 -2 7806 7370 259 238 344 0 chr2 78105878 78106029 -175150554 - MER112 DNA MER1_type -15 245 43 1866 215 103 37 chr2 78106082 78106618 -175149965 + MLT1E2 LTR MaLR 56 626 0 2850 191 83 19 chr2 78106839 78107523 -175149060 - L1ME1 LINE L1 -28 6138 5411 2273 92 0 3 chr2 78107960 78108269 -175148314 - AluSx SINE Alu 0 308 1 208 274 113 0 chr2 78109210 78109272 -175147311 + MIR SINE MIR 8 76 -186 2597 55 0 0 chr2 78109336 78109647 -175146936 + AluY SINE Alu 1 311 0 780 194 42 0 chr2 78109660 78109804 -175146779 + MIR SINE MIR 91 240 -22 707 235 103 56 chr2 78110088 78110162 -175146421 + HAL1b LINE L1 866 935 -413 2405 100 0 0 chr2 78110162 78110471 -175146112 - AluSc SINE Alu 0 309 1 707 235 103 56 chr2 78110471 78110822 -175145761 + HAL1b LINE L1 935 1311 -37 373 284 95 7 chr2 78111480 78111628 -175144955 + MIR3 SINE MIR 3 163 -45 593 301 128 0 chr2 78111658 78111861 -175144722 - MIR SINE MIR -32 230 2 446 217 41 5 chr2 78112298 78112419 -175144164 + L1ME LINE L1 5571 5693 -471 1338 122 0 0 chr2 78112419 78112599 -175143984 + AluJb SINE Alu 1 180 -132 310 238 62 12 chr2 78112601 78112681 -175143902 - LTR8 LTR ERV1 -607 84 1 771 279 116 42 chr2 78113995 78114183 -175142400 - MLT1J LTR MaLR 0 511 338 999 164 4 108 chr2 78114183 78114414 -175142169 + MER3 DNA MER1_type 2 208 -1 771 279 116 42 chr2 78114414 78114701 -175141882 - MLT1J LTR MaLR -173 338 1 322 277 36 54 chr2 78114771 78114883 -175141700 + MIR SINE MIR 150 259 -3 340 268 125 94 chr2 78116381 78116773 -175139810 + L2 LINE L2 2826 3229 -43 331 206 28 37 chr2 78116925 78117032 -175139551 - L1ME4a LINE L1 -94 6027 5922 311 331 48 8 chr2 78117590 78117714 -175138869 - L1 LINE L1 -1098 5048 4920 1843 141 55 7 chr2 78117722 78118013 -175138570 - AluSx SINE Alu -7 305 1 15973 57 2 3 chr2 78118045 78120758 -175135825 + L1PA6 LINE L1 3399 6154 0 243 200 187 0 chr2 78120845 78120920 -175135663 - L1 LINE L1 -1295 4851 4763 1335 231 87 37 chr2 78120960 78121476 -175135107 - L1MC4 LINE L1 0 8042 7501 648 231 69 23 chr2 78121498 78121714 -175134869 - LTR33 LTR ERVL 0 521 296 426 214 153 0 chr2 78121775 78121906 -175134677 - LTR33 LTR ERVL -339 182 32 265 243 56 75 chr2 78122006 78122113 -175134470 - HAL1 LINE L1 -109 2398 2294 596 264 177 20 chr2 78122127 78122471 -175134112 - HAL1 LINE L1 -294 2213 1816 747 214 101 108 chr2 78122478 78122865 -175133718 + MLT1E2 LTR MaLR 1 384 -240 1160 261 69 15 chr2 78122869 78123260 -175133323 - MER66A LTR ERV1 -9 469 58 1072 221 51 28 chr2 78123339 78123592 -175132991 + MLT1E2 LTR MaLR 368 626 0 1950 139 20 93 chr2 78123683 78124135 -175132448 - Charlie1 DNA MER1_type 0 2761 2343 330 217 29 0 chr2 78124133 78124202 -175132381 - Charlie1 DNA MER1_type -2690 71 1 * 328 214 167 0 chr2 78124218 78124302 -175132281 + MER5A DNA MER1_type 9 106 -83 450 200 107 29 chr2 78124347 78124487 -175132096 - HAL1 LINE L1 -789 1718 1568 246 307 60 36 chr2 78124494 78124660 -175131923 - HAL1 LINE L1 -2032 475 306 352 244 116 30 chr2 78124783 78124947 -175131636 - L1MC4 LINE L1 -364 7678 7501 421 212 85 0 chr2 78124969 78125087 -175131496 - LTR33 LTR ERVL 0 521 394 402 299 103 5 chr2 78125382 78125606 -175130977 - L1 LINE L1 -1531 4615 4370 216 0 0 0 chr2 78125865 78125889 -175130694 + (T)n Simple_repeat Simple_repeat 1 24 0 1768 103 179 0 chr2 78126336 78126599 -175129984 + AluSx SINE Alu 1 310 -2 302 183 14 0 chr2 78128399 78128470 -175128113 + (TG)n Simple_repeat Simple_repeat 2 73 0 283 157 49 29 chr2 78128470 78128572 -175128011 + (TA)n Simple_repeat Simple_repeat 2 105 0 185 273 23 0 chr2 78128794 78128838 -175127745 - L2 LINE L2 -95 3177 3133 2417 84 0 3 chr2 78129047 78129345 -175127238 - AluSq SINE Alu -16 297 1 2546 163 61 5 chr2 78129671 78130082 -175126501 - MER61C LTR ERV1 0 434 1 1037 187 16 11 chr2 78130107 78130294 -175126289 + MER5A DNA MER1_type 2 189 0 727 220 27 20 chr2 78131383 78131533 -175125050 + MER5A DNA MER1_type 39 189 0 445 241 66 15 chr2 78131533 78131668 -175124915 - MIR SINE MIR -34 228 87 1148 246 90 50 chr2 78131670 78132254 -175124329 + MLT1H1 LTR MaLR 1 555 0 188 290 81 0 chr2 78132416 78132478 -175124105 - MIR SINE MIR 0 262 196 1049 252 100 17 chr2 78132478 78132898 -175123685 - L1 LINE L1 -3044 3102 2648 23 0 0 0 chr2 78133033 78133056 -175123527 + AT_rich Low_complexity Low_complexity 1 23 0 285 192 0 110 chr2 78133146 78133219 -175123364 + L2 LINE L2 3249 3313 0 467 248 72 8 chr2 78133295 78133420 -175123163 - MER91B DNA MER1_type -48 142 10 2022 231 26 15 chr2 78133743 78134283 -175122300 + L1M4 LINE L1 3474 4019 -2127 673 271 96 18 chr2 78134357 78134586 -175121997 - MIR SINE MIR -3 259 13 273 165 38 63 chr2 78134782 78134861 -175121722 - MER5B DNA MER1_type -68 110 34 603 268 102 64 chr2 78135041 78135462 -175121121 + MLT1J LTR MaLR 27 463 -48 335 344 124 56 chr2 78135496 78135923 -175120660 - L2 LINE L2 -9 3263 2808 457 278 83 29 chr2 78135988 78136193 -175120390 - L2 LINE L2 -559 2755 2540 2090 109 0 3 chr2 78136282 78136597 -175119986 - AluSx SINE Alu 0 314 1 2516 162 82 9 chr2 78137275 78137738 -175118845 - MLT1D LTR MaLR -7 498 2 461 262 0 0 chr2 78137936 78138020 -175118563 + L2 LINE L2 3136 3219 -53 1956 147 7 0 chr2 78138068 78138361 -175118222 - AluSx SINE Alu -17 295 1 834 282 144 29 chr2 78138412 78138855 -175117728 + MLT1L LTR MaLR 120 613 -2 2127 85 0 70 chr2 78140546 78140862 -175115721 + AluSc SINE Alu 1 294 -15 585 333 33 12 chr2 78140881 78141214 -175115369 + L1ME4a LINE L1 5530 5869 -252 469 222 68 8 chr2 78142189 78142306 -175114277 + MLT1B LTR MaLR 1 124 -266 2454 66 3 3 chr2 78142414 78142717 -175113866 - AluY SINE Alu -8 303 1 1060 203 8 95 chr2 78142729 78142970 -175113613 + MLT1B LTR MaLR 147 374 -8 2191 102 0 3 chr2 78143064 78143380 -175113203 + AluSx SINE Alu 1 315 0 646 267 113 25 chr2 78143411 78143651 -175112932 - MIR SINE MIR 0 262 2 1760 124 91 0 chr2 78144211 78144486 -175112097 + AluSx SINE Alu 1 300 -12 8752 149 27 19 chr2 78145495 78147993 -175108590 + L1MA9 LINE L1 3747 6266 -46 1706 174 13 13 chr2 78147993 78148298 -175108285 - AluJo SINE Alu -7 305 1 8752 149 27 19 chr2 78148298 78148345 -175108238 + L1MA9 LINE L1 6266 6311 -1 2965 187 68 12 chr2 78148385 78149027 -175107556 - MER63C DNA MER1_type 0 930 253 245 162 0 0 chr2 78149026 78149063 -175107520 - MER63C DNA MER1_type -893 37 1 * 2577 171 14 33 chr2 78149140 78149654 -175106929 + L1MB2 LINE L1 5639 6142 -29 2234 95 0 0 chr2 78150250 78150560 -175106023 - AluSq SINE Alu 0 311 2 267 295 53 0 chr2 78151676 78151771 -175104812 + LTR16C LTR ERVL 31 130 -361 1173 246 27 14 chr2 78151797 78152094 -175104489 + LTR16C LTR ERVL 188 488 -3 375 271 25 17 chr2 78152990 78153108 -175103475 + MER103 DNA DNA 34 152 -14 282 306 146 8 chr2 78153302 78153570 -175103013 + L1M4 LINE L1 4300 4604 -1542 657 198 0 25 chr2 78154354 78154475 -175102108 - FLAM_C SINE Alu -24 119 2 1995 109 0 0 chr2 78154494 78154783 -175101800 + AluSq SINE Alu 20 308 0 875 244 96 65 chr2 78154938 78155324 -175101259 + MLT1J1 LTR MaLR 49 446 0 846 201 7 0 chr2 78155381 78155530 -175101053 - MER58A DNA MER1_type -49 175 26 395 348 0 0 chr2 78155617 78155729 -175100854 + L2 LINE L2 3200 3311 -2 314 272 148 18 chr2 78155887 78156056 -175100527 + L1ME4a LINE L1 5697 5887 -234 703 299 49 33 chr2 78156924 78157168 -175099415 + MIR SINE MIR 3 250 -12 192 274 65 16 chr2 78157194 78157256 -175099327 + L2 LINE L2 2965 3029 -243 1941 266 39 8 chr2 78157265 78157904 -175098679 + L2 LINE L2 2152 2810 -504 2009 133 10 0 chr2 78157924 78158226 -175098357 - AluSq SINE Alu -8 305 1 1329 191 56 28 chr2 78158262 78158582 -175098001 + L1ME3A LINE L1 5840 6168 -2 502 293 37 11 chr2 78158695 78158886 -175097697 + MER117 DNA MER1_type 2 197 0 417 316 82 0 chr2 78159412 78159570 -175097013 + L2 LINE L2 2891 3061 -252 913 291 32 42 chr2 78159587 78159992 -175096591 - L2 LINE L2 0 3313 2913 312 286 84 39 chr2 78159987 78160165 -175096418 + L2 LINE L2 3078 3263 -50 * 329 252 201 0 chr2 78160475 78160614 -175095969 + MER45A DNA AcHobo 1 167 -11 268 289 0 10 chr2 78161074 78161178 -175095405 + (TA)n Simple_repeat Simple_repeat 2 104 0 239 136 12 62 chr2 78161200 78161281 -175095302 + (TA)n Simple_repeat Simple_repeat 2 78 0 246 237 37 59 chr2 78161641 78161776 -175094807 - L2 LINE L2 -18 3295 3164 480 290 100 23 chr2 78161931 78162190 -175094393 - L2 LINE L2 -434 2880 2602 1080 277 115 8 chr2 78162386 78162855 -175093728 + LTR33 LTR ERVL 3 521 0 330 330 0 0 chr2 78162963 78163051 -175093532 + L2 LINE L2 2579 2666 -648 739 234 0 0 chr2 78163100 78163287 -175093296 + FRAM SINE Alu 2 188 0 251 380 72 5 chr2 78163290 78163511 -175093072 + L2 LINE L2 2703 2938 -376 1347 147 56 32 chr2 78163781 78163881 -175092702 + MER33 DNA MER1_type 1 97 -2488 1926 186 92 0 chr2 78163881 78164241 -175092342 + MSTD LTR MaLR 4 396 0 1347 147 56 32 chr2 78164241 78164425 -175092158 + MER33 DNA MER1_type 97 292 -32 367 258 21 0 chr2 78164457 78164554 -175092029 + MER5A DNA MER1_type 7 105 -84 2112 142 0 3 chr2 78165288 78165591 -175090992 + AluSx SINE Alu 1 302 -10 27 0 0 0 chr2 78165818 78165845 -175090738 + AT_rich Low_complexity Low_complexity 1 27 0 2398 105 0 0 chr2 78165925 78166231 -175090352 - AluSg SINE Alu -4 306 1 242 303 33 16 chr2 78166870 78166992 -175089591 + MIR SINE MIR 138 261 -1 251 160 43 32 chr2 78167074 78167168 -175089415 + (TTAA)n Simple_repeat Simple_repeat 1 95 0 2027 132 3 17 chr2 78168274 78168584 -175087999 - AluSx SINE Alu 0 306 1 573 265 75 35 chr2 78168701 78168901 -175087682 - MER63A DNA MER1_type -1 209 2 293 281 81 84 chr2 78169199 78169580 -175087003 - L2 LINE L2 -4 3309 2930 1636 192 45 20 chr2 78169884 78170238 -175086345 - MLT1A1 LTR MaLR -2 363 1 334 271 84 9 chr2 78170490 78170597 -175085986 + MER5A DNA MER1_type 1 115 -74 732 312 203 37 chr2 78170605 78171972 -175084611 + L2 LINE L2 1310 2902 -412 22 0 0 0 chr2 78172693 78172715 -175083868 + AT_rich Low_complexity Low_complexity 1 22 0 223 283 133 35 chr2 78173506 78173619 -175082964 - MER5A DNA MER1_type -22 167 44 * 321 298 107 0 chr2 78173527 78173648 -175082935 + MER5A DNA MER1_type 55 188 -1 287 300 113 7 chr2 78174338 78174488 -175082095 + MIR SINE MIR 71 236 -26 1367 200 53 39 chr2 78175018 78175378 -175081205 - MLT1A1 LTR MaLR 0 365 1 247 297 11 22 chr2 78175503 78175594 -175080989 + GA-rich Low_complexity Low_complexity 1 90 0 642 271 129 72 chr2 78176966 78177383 -175079200 + LTR16B LTR ERVL 2 442 -22 265 292 56 11 chr2 78179777 78179866 -175076717 - MIR3 SINE MIR -1 207 115 234 318 135 8 chr2 78180315 78180441 -175076142 - MIR3 SINE MIR -30 178 37 302 227 92 76 chr2 78181197 78181316 -175075267 - L2 LINE L2 -10 3262 3142 434 299 90 84 chr2 78182064 78182385 -175074198 + MER102b DNA MER1_type 19 341 0 993 202 16 11 chr2 78182790 78182978 -175073605 + MER5A DNA MER1_type 1 189 0 1936 184 22 3 chr2 78183249 78183607 -175072976 + MLT1A1 LTR MaLR 1 365 0 372 226 177 11 chr2 78183724 78183905 -175072678 + L1MC4a LINE L1 5812 6022 -1786 213 39 0 0 chr2 78183919 78183945 -175072638 + (TG)n Simple_repeat Simple_repeat 1 26 0 1177 261 68 18 chr2 78184011 78184409 -175072174 - L1MD2 LINE L1 0 6359 5942 362 318 129 31 chr2 78185226 78185512 -175071071 + L3 LINE CR1 910 1223 -354 605 191 121 25 chr2 78185601 78185758 -175070825 + MLT1J2 LTR MaLR 229 428 -9 180 0 0 0 chr2 78185906 78185926 -175070657 + (TAA)n Simple_repeat Simple_repeat 1 20 0 501 221 82 19 chr2 78186048 78186206 -175070377 - MIR SINE MIR -48 214 47 880 173 38 16 chr2 78186904 78187089 -175069494 - MER5A DNA MER1_type 0 189 1 270 335 93 19 chr2 78187097 78187258 -175069325 - MER5B DNA MER1_type 0 178 6 1623 232 26 21 chr2 78187331 78187825 -175068758 + MER74A LTR ERVL 1 552 -6 2055 168 48 32 chr2 78188041 78188237 -175068346 + L1MB4 LINE L1 5602 5793 -387 2576 91 122 27 chr2 78188237 78188646 -175067937 + LTR7 LTR ERV1 1 448 -2 2055 168 48 32 chr2 78188646 78188890 -175067693 + L1MB4 LINE L1 5793 6049 -131 673 129 66 59 chr2 78188916 78189086 -175067497 + L1MB4 LINE L1 6020 6178 0 302 248 28 18 chr2 78190313 78190422 -175066161 - L3 LINE CR1 -48 1529 1420 360 284 181 0 chr2 78190425 78190552 -175066031 + MER5A DNA MER1_type 31 180 -9 749 247 17 11 chr2 78190558 78190732 -175065851 - MER5B DNA MER1_type -3 175 1 312 319 34 0 chr2 78191216 78191335 -175065248 - L2 LINE L2 -8 3264 3142 234 235 144 15 chr2 78191537 78191669 -175064914 - L2 LINE L2 -218 3054 2906 830 285 133 37 chr2 78193395 78194051 -175062532 - L1ME4a LINE L1 -5 6116 5380 2272 115 83 9 chr2 78194051 78194390 -175062193 - THE1B LTR MaLR 0 364 1 830 285 133 37 chr2 78194390 78194469 -175062114 - L1ME4a LINE L1 -741 5380 5310 353 373 69 11 chr2 78194502 78194864 -175061719 - L1ME4a LINE L1 -1020 5126 4744 188 225 106 113 chr2 78197388 78197530 -175059053 - MIR3 SINE MIR -55 153 13 542 310 96 15 chr2 78198610 78199115 -175057468 - L2 LINE L2 -50 3263 2709 1748 174 43 87 chr2 78199203 78199618 -175056965 - MLT2C1 LTR ERVL 0 397 1 322 278 0 0 chr2 78199720 78199810 -175056773 - MIR SINE MIR -2 260 171 254 206 103 0 chr2 78199876 78199944 -175056639 + MER91C DNA MER1_type 37 111 -29 303 174 0 0 chr2 78200079 78200089 -175056494 + (TA)n Simple_repeat Simple_repeat 1 10 -59 2766 99 0 0 chr2 78200089 78200453 -175056130 + THE1B LTR MaLR 1 364 0 303 174 0 0 chr2 78200453 78200511 -175056072 + (TA)n Simple_repeat Simple_repeat 9 69 0 3112 141 202 112 chr2 78200523 78201078 -175055505 - L1MC3 LINE L1 0 7785 7281 310 257 29 29 chr2 78201078 78201183 -175055400 - MLT1F1 LTR MaLR -442 125 21 3112 141 202 112 chr2 78201183 78201373 -175055210 - L1MC3 LINE L1 -504 7281 7109 447 68 0 0 chr2 78201373 78201432 -175055151 + (TG)n Simple_repeat Simple_repeat 2 60 0 3112 141 202 112 chr2 78201432 78201572 -175055011 - L1MC3 LINE L1 -676 7109 6706 497 316 5 36 chr2 78201833 78202026 -175054557 - MIR SINE MIR -66 196 10 1414 236 30 12 chr2 78202027 78202362 -175054221 + MER58B DNA MER1_type 1 341 0 248 233 144 11 chr2 78203026 78203116 -175053467 - L2 LINE L2 -1366 1948 1847 270 95 0 0 chr2 78203666 78203708 -175052875 + (CCCTAA)n Simple_repeat Simple_repeat 2 43 0 267 103 0 0 chr2 78204103 78204142 -175052441 + (CTAAA)n Simple_repeat Simple_repeat 3 41 0 635 225 0 0 chr2 78206024 78206135 -175050448 - MER81 DNA DNA -3 111 1 203 205 0 0 chr2 78206297 78206336 -175050247 + L2 LINE L2 1961 1999 -1315 814 260 38 1 chr2 78206345 78206583 -175050000 + L1ME LINE L1 5408 5658 -504 470 264 108 71 chr2 78206769 78207194 -175049389 + L1M4 LINE L1 2112 2552 -3594 297 192 41 27 chr2 78207265 78207338 -175049245 + MIR3 SINE MIR 88 161 -47 244 308 82 20 chr2 78207822 78207968 -175048615 + MIR3 SINE MIR 24 178 -30 260 254 90 41 chr2 78208066 78208146 -175048437 - MIR SINE MIR -26 236 147 2283 88 3 0 chr2 78208146 78208431 -175048152 - AluSp SINE Alu -27 286 1 260 254 90 41 chr2 78208431 78208472 -175048111 - MIR SINE MIR -115 147 109 283 286 125 0 chr2 78208794 78208906 -175047677 - L2 LINE L2 -1 3271 3146 558 278 49 0 chr2 78209458 78209620 -175046963 + MIR SINE MIR 79 248 -14 22 0 0 0 chr2 78209623 78209645 -175046938 + AT_rich Low_complexity Low_complexity 1 22 0 649 264 14 32 chr2 78210172 78210388 -175046195 - L3 LINE CR1 -105 1472 1261 189 0 0 0 chr2 78210898 78210919 -175045664 + (T)n Simple_repeat Simple_repeat 1 21 0 226 194 16 32 chr2 78211464 78211526 -175045057 + (CA)n Simple_repeat Simple_repeat 2 62 0 201 338 113 33 chr2 78211792 78211943 -175044640 + MIR SINE MIR 58 220 -42 946 304 182 14 chr2 78212444 78213020 -175043563 + MER115 DNA AcHobo 21 693 0 26 0 0 0 chr2 78213060 78213086 -175043497 + AT_rich Low_complexity Low_complexity 1 26 0 19954 38 0 0 chr2 78213089 78216305 -175040278 - L1PA5 LINE L1 -7 6147 2936 1429 114 40 0 chr2 78216389 78216617 -175039966 + LTR26 LTR ERV1 362 598 -5 319 256 0 26 chr2 78217572 78217650 -175038933 + L2 LINE L2 3223 3298 -15 195 69 0 0 chr2 78217650 78217679 -175038904 + (ACTG)n Simple_repeat Simple_repeat 4 32 0 958 159 48 96 chr2 78218127 78218461 -175038122 + MER33 DNA MER1_type 7 324 0 233 281 92 40 chr2 78219261 78219518 -175037065 + L2 LINE L2 2754 3021 -251 241 200 320 0 chr2 78219660 78219735 -175036848 + L2 LINE L2 3215 3313 0 313 226 12 12 chr2 78220408 78220492 -175036091 + L2 LINE L2 2499 2582 -732 216 186 0 0 chr2 78221103 78221146 -175035437 + (CAT)n Simple_repeat Simple_repeat 3 45 0 181 338 54 14 chr2 78221156 78221230 -175035353 - L3 LINE CR1 -1076 501 425 * 310 200 74 97 chr2 78221228 78221403 -175035180 + L2 LINE L2 2995 3165 -148 1533 149 123 31 chr2 78221403 78221753 -175034830 + MER4B LTR ERV1 1 382 -228 225 0 0 0 chr2 78222363 78222388 -175034195 + (A)n Simple_repeat Simple_repeat 1 25 0 377 303 48 14 chr2 78222393 78222538 -175034045 + MIR3 SINE MIR 48 197 -11 349 264 39 65 chr2 78222634 78222789 -175033794 - MIR SINE MIR -77 185 35 346 283 29 80 chr2 78223037 78223175 -175033408 + MIR SINE MIR 62 192 -70 23 54 0 0 chr2 78224885 78224922 -175031661 + AT_rich Low_complexity Low_complexity 1 37 0 483 272 19 51 chr2 78225037 78225195 -175031388 - MIR3 SINE MIR -33 175 23 485 244 6 0 chr2 78225724 78225900 -175030683 + (TGG)n Simple_repeat Simple_repeat 3 179 0 198 0 0 0 chr2 78226000 78226022 -175030561 + (TA)n Simple_repeat Simple_repeat 2 23 0 242 286 201 18 chr2 78226893 78227166 -175029417 + MLT1J2 LTR MaLR 107 429 -21 189 326 73 82 chr2 78227566 78227799 -175028784 + MIR SINE MIR 32 262 0 391 309 119 11 chr2 78227878 78228147 -175028436 + L2 LINE L2 1346 1643 -1671 633 215 161 32 chr2 78229023 78229209 -175027374 + MER63A DNA MER1_type 1 210 0 302 284 110 79 chr2 78229222 78229539 -175027044 - L1ME4a LINE L1 -6 6115 5789 963 347 130 30 chr2 78229890 78230944 -175025639 + L2 LINE L2 219 1377 -1937 263 278 43 35 chr2 78230944 78231059 -175025524 + L2 LINE L2 2146 2261 -1053 391 299 18 7 chr2 78231300 78231504 -175025079 + MIR SINE MIR 2 262 0 219 268 18 0 chr2 78231845 78231901 -175024682 + L2 LINE L2 3257 3313 0 839 208 11 17 chr2 78232530 78232708 -175023875 - MIR SINE MIR -19 243 67 2076 142 13 10 chr2 78232827 78233136 -175023447 + AluSx SINE Alu 1 310 -2 474 241 17 29 chr2 78233406 78233564 -175023019 + MLT1H LTR MaLR 443 549 0 314 337 97 58 chr2 78233622 78234126 -175022457 + HAL1b LINE L1 249 772 -576 683 214 0 12 chr2 78234157 78234325 -175022258 - Charlie1b DNA MER1_type -5 518 353 1277 150 43 151 chr2 78234326 78234712 -175021871 + L1MC3 LINE L1 6705 7022 -763 285 109 0 0 chr2 78234712 78234758 -175021825 + (TAAA)n Simple_repeat Simple_repeat 4 49 0 1277 150 43 151 chr2 78234758 78234951 -175021632 + L1MC3 LINE L1 7022 7234 -551 2580 214 50 21 chr2 78234976 78235908 -175020675 + L1M1 LINE L1 3315 4271 -3294 * 5042 150 32 3 chr2 78235900 78236839 -175019744 + L1MA9 LINE L1 5347 6312 0 2197 184 49 2 chr2 78236837 78237303 -175019280 + L1MC3 LINE L1 7256 7743 -42 * 1153 215 101 13 chr2 78237303 78237679 -175018904 - Charlie1b DNA MER1_type -114 409 1 385 189 9 18 chr2 78238637 78238748 -175017835 + GA-rich Low_complexity Low_complexity 3 112 0 345 253 117 0 chr2 78239348 78239502 -175017081 + L1M1 LINE L1 5072 5243 -2322 451 335 163 7 chr2 78239687 78239994 -175016589 + L1M1 LINE L1 5434 5788 -1777 320 256 58 39 chr2 78241252 78241408 -175015175 + HAL1b LINE L1 340 498 -850 411 285 86 71 chr2 78241537 78242070 -175014513 - L1ME4a LINE L1 -19 6102 5562 494 290 60 20 chr2 78242690 78243038 -175013545 + L1MC4a LINE L1 5711 6072 -1736 27 0 0 0 chr2 78243093 78243120 -175013463 + AT_rich Low_complexity Low_complexity 1 27 0 353 383 23 23 chr2 78243880 78244230 -175012353 - L1M4 LINE L1 -2214 3932 3583 258 105 0 0 chr2 78244679 78244717 -175011866 + (T)n Simple_repeat Simple_repeat 1 38 0 324 0 0 0 chr2 78246245 78246281 -175010302 + (TG)n Simple_repeat Simple_repeat 2 37 0 1441 237 121 27 chr2 78246332 78246785 -175009798 + L1MC4a LINE L1 5324 5842 -1966 2636 36 0 3 chr2 78246785 78247094 -175009489 + AluY SINE Alu 1 308 -3 1441 237 121 27 chr2 78247094 78247202 -175009381 + L1MC4a LINE L1 5842 5938 -1870 1683 168 24 14 chr2 78247265 78247562 -175009021 - AluJb SINE Alu -12 300 1 770 309 40 30 chr2 78247582 78247787 -175008796 - L1ME LINE L1 -399 5771 5570 2333 88 0 3 chr2 78247787 78248083 -175008500 + AluSq SINE Alu 1 295 -18 770 309 40 30 chr2 78248083 78248294 -175008289 - L1ME LINE L1 -600 5570 5347 306 0 0 0 chr2 78248294 78248328 -175008255 + (TG)n Simple_repeat Simple_repeat 1 34 0 770 309 40 30 chr2 78248328 78248379 -175008204 - L1ME LINE L1 -823 5347 5298 2310 148 0 0 chr2 78248755 78249121 -175007462 - MER47A DNA MER2_type 0 366 1 231 342 54 36 chr2 78249128 78249239 -175007344 - MIR SINE MIR -142 120 8 354 292 105 41 chr2 78250419 78250590 -175005993 - MIR SINE MIR -61 201 20 516 288 102 9 chr2 78250999 78251225 -175005358 - LTR16C LTR ERVL -44 447 201 515 60 0 120 chr2 78251239 78251339 -175005244 - MER41B LTR ERV1 -81 554 467 249 291 52 45 chr2 78251311 78251445 -175005138 - LTR16C LTR ERVL -277 214 80 * 218 203 0 17 chr2 78254841 78254900 -175001683 + CT-rich Low_complexity Low_complexity 4 61 0 949 265 5 0 chr2 78255727 78255950 -175000633 - MER58A DNA MER1_type 0 224 1 2142 128 3 6 chr2 78256332 78256645 -174999938 - AluSx SINE Alu 0 312 1 222 214 0 0 chr2 78256763 78256805 -174999778 + L2 LINE L2 3226 3267 -5 3697 98 19 29 chr2 78257082 78257663 -174998920 - L1PA14 LINE L1 -1 6160 5586 2007 123 11 0 chr2 78257663 78258212 -174998371 + L1PA14 LINE L1 5002 5555 -606 30 27 0 0 chr2 78258521 78258558 -174998025 + AT_rich Low_complexity Low_complexity 1 37 0 233 349 71 32 chr2 78259096 78259222 -174997361 + L2 LINE L2 3054 3184 -88 256 221 29 15 chr2 78260571 78260639 -174995944 - L1MA5 LINE L1 -132 6168 6100 1103 99 0 19 chr2 78260641 78260802 -174995781 + L1MA5 LINE L1 6142 6299 -1 1043 136 17 11 chr2 78261202 78261379 -174995204 - MER96B DNA MER1_type? -239 178 1 2412 77 7 0 chr2 78262248 78262548 -174994035 - AluY SINE Alu -9 302 1 776 256 68 55 chr2 78263042 78263441 -174993142 - MER114 LTR ERV 0 648 245 1255 281 81 63 chr2 78263468 78264248 -174992335 - L1MEd LINE L1 -5061 1058 265 622 255 92 27 chr2 78264600 78264784 -174991799 - MIR SINE MIR -34 228 33 4114 80 14 55 chr2 78264887 78265465 -174991118 + MER41A LTR ERV1 1 554 0 312 319 28 44 chr2 78265668 78265850 -174990733 - L2 LINE L2 -191 3081 2903 261 356 96 0 chr2 78266412 78266547 -174990036 + MIR SINE MIR 105 252 -10 269 288 76 38 chr2 78267549 78267681 -174988902 + MIR3 SINE MIR 37 173 -35 2332 93 0 13 chr2 78268604 78268917 -174987666 + AluY SINE Alu 1 309 -2 255 103 0 0 chr2 78269911 78269950 -174986633 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 301 336 28 0 chr2 78269952 78270059 -174986524 - L2 LINE L2 -22 3250 3141 30 0 0 0 chr2 78270157 78270187 -174986396 + AT_rich Low_complexity Low_complexity 1 30 0 412 267 49 37 chr2 78270368 78270582 -174986001 - MIR SINE MIR -71 191 20 183 296 51 51 chr2 78271856 78271954 -174984629 + L2 LINE L2 3171 3268 -45 194 250 88 50 chr2 78272790 78272870 -174983713 - L2 LINE L2 -4 3309 3227 182 285 26 99 chr2 78273212 78273363 -174983220 - MIR SINE MIR -61 147 8 215 275 265 25 chr2 78273699 78273899 -174982684 - L2 LINE L2 0 3272 3025 209 363 52 15 chr2 78273926 78274061 -174982522 + MER5B DNA MER1_type 9 148 -30 195 272 139 25 chr2 78274270 78274428 -174982155 - L2 LINE L2 -373 2941 2766 516 281 53 99 chr2 78274644 78274844 -174981739 - MIR SINE MIR -10 252 65 382 16 323 32 chr2 78274844 78274906 -174981677 - MADE1 DNA Mariner 0 80 1 516 281 53 99 chr2 78274906 78274968 -174981615 - MIR SINE MIR -197 65 2 251 310 93 37 chr2 78276519 78276929 -174979654 + L1 LINE L1 4114 4546 -1600 546 309 60 85 chr2 78276953 78277284 -174979299 - L2 LINE L2 -958 2356 2041 2092 137 0 0 chr2 78277284 78277583 -174979000 - AluSx SINE Alu -13 299 1 546 309 60 85 chr2 78277583 78277768 -174978815 - L2 LINE L2 -1273 2041 1853 212 250 58 0 chr2 78277851 78277903 -174978680 + MIR SINE MIR 98 152 -56 12055 96 2 13 chr2 78278578 78278907 -174977676 - L1PA8 LINE L1 -8 6164 5833 2065 120 0 10 chr2 78278907 78279206 -174977377 - AluY SINE Alu -15 296 1 12055 96 2 13 chr2 78279206 78281297 -174975286 - L1PA8 LINE L1 -339 5833 3758 218 370 97 32 chr2 78281300 78281454 -174975129 - L2 LINE L2 -13 3259 3096 2608 104 8 14 chr2 78281474 78281831 -174974752 + THE1A LTR MaLR 1 355 0 12732 90 5 1 chr2 78281832 78283405 -174973178 + THE1A-int LTR MaLR 2 1580 0 2816 88 6 0 chr2 78283405 78283758 -174972825 + THE1A LTR MaLR 1 355 0 212 208 94 0 chr2 78283820 78283873 -174972710 + L2 LINE L2 3254 3311 -2 2091 115 7 16 chr2 78284051 78284356 -174972227 - AluSg SINE Alu -3 307 6 360 45 0 0 chr2 78284652 78284696 -174971887 + THE1-int LTR MaLR 406 449 -1131 440 116 8 41 chr2 78285567 78285688 -174970895 + (CA)n Simple_repeat Simple_repeat 1 117 0 283 255 32 11 chr2 78286522 78286616 -174969967 + CT-rich Low_complexity Low_complexity 2 97 0 1378 187 41 8 chr2 78287035 78287302 -174969281 + MER58 DNA MER1_type 4 279 -62 902 240 74 49 chr2 78287321 78287494 -174969089 + MLT1C LTR MaLR 135 321 -146 2008 115 41 0 chr2 78287494 78287789 -174968794 + AluY SINE Alu 1 307 -4 902 240 74 49 chr2 78287789 78287940 -174968643 + MLT1C LTR MaLR 321 467 0 474 281 52 13 chr2 78289988 78290141 -174966442 + MIR SINE MIR 32 190 -72 250 200 0 17 chr2 78290130 78290190 -174966393 - MIR SINE MIR -44 218 160 * 228 306 20 20 chr2 78290402 78290500 -174966083 + HAL1b LINE L1 626 723 -625 21 82 0 0 chr2 78290500 78290549 -174966034 + AT_rich Low_complexity Low_complexity 1 49 0 524 251 125 47 chr2 78292021 78292300 -174964283 + HAL1b LINE L1 309 609 -739 302 257 133 55 chr2 78292755 78292973 -174963610 + L1ME4a LINE L1 2115 2349 -4047 186 43 0 0 chr2 78293204 78293227 -174963356 + (A)n Simple_repeat Simple_repeat 1 23 0 556 281 158 4 chr2 78294063 78294355 -174962228 + MLT1J2 LTR MaLR 2 331 -119 2421 90 0 0 chr2 78295206 78295507 -174961076 + AluY SINE Alu 1 301 -10 23 68 0 0 chr2 78295518 78295562 -174961021 + AT_rich Low_complexity Low_complexity 1 44 0 2277 71 3 0 chr2 78296461 78296768 -174959815 - AluY SINE Alu 0 308 1 243 279 54 27 chr2 78297294 78297441 -174959142 + L1ME4a LINE L1 3889 4039 -2176 309 301 64 74 chr2 78298388 78298793 -174957790 + L1ME4a LINE L1 4651 5051 -1164 392 270 112 75 chr2 78299013 78299380 -174957203 + L1ME4a LINE L1 5472 5859 -331 2147 198 42 42 chr2 78299380 78299885 -174956698 + MLT1D LTR MaLR 1 505 0 392 270 112 75 chr2 78299885 78299954 -174956629 + L1ME4a LINE L1 5859 5924 -266 241 257 171 0 chr2 78300014 78300119 -174956464 + L1ME4a LINE L1 6067 6189 -1 332 328 30 52 chr2 78300383 78300786 -174955797 - HAL1b LINE L1 -636 712 319 2785 116 3 0 chr2 78301259 78301622 -174954961 + THE1B LTR MaLR 1 364 0 11378 84 46 29 chr2 78301622 78303175 -174953408 + THE1B-int LTR MaLR 1 1580 0 273 171 0 0 chr2 78303176 78303217 -174953366 + MSTA LTR MaLR 388 428 0 1487 163 40 126 chr2 78303900 78304274 -174952309 - MLT1B LTR MaLR -48 342 1 635 123 0 85 chr2 78305432 78305538 -174951045 - Tigger7 DNA MER2_type -1 2486 2390 * 1625 170 11 4 chr2 78305537 78305802 -174950781 - Tigger7 DNA MER2_type -2220 267 1 1026 209 51 13 chr2 78306313 78306548 -174950035 + MER20B DNA MER1_type 44 287 -496 1746 240 54 20 chr2 78306565 78307007 -174949576 - MLT1D LTR MaLR -48 457 1 225 132 0 0 chr2 78307173 78307211 -174949372 + (A)n Simple_repeat Simple_repeat 1 38 0 797 230 37 33 chr2 78307214 78307484 -174949099 + MER20B DNA MER1_type 461 731 -52 3330 285 133 22 chr2 78307937 78309340 -174947243 + L2 LINE L2 84 1331 -1983 2487 72 0 3 chr2 78309340 78309644 -174946939 - AluSq SINE Alu -9 304 2 3330 285 133 22 chr2 78309644 78310709 -174945874 + L2 LINE L2 1331 2793 -521 624 246 130 55 chr2 78310742 78311103 -174945480 + MLT1J2 LTR MaLR 61 448 -2 672 291 202 18 chr2 78311116 78311498 -174945085 + L2 LINE L2 2833 3284 -29 794 259 114 89 chr2 78311503 78312031 -174944552 + MLT1H LTR MaLR 9 549 0 369 296 33 101 chr2 78313047 78313473 -174943110 - MLT1J LTR MaLR -3 508 112 1755 153 0 111 chr2 78313647 78314033 -174942550 + MER7A DNA MER2_type 1 341 -5 308 264 136 55 chr2 78314134 78314244 -174942339 + L2 LINE L2 3139 3257 -15 486 328 139 33 chr2 78315170 78315892 -174940691 + L1ME LINE L1 3648 4440 -1706 21 0 0 0 chr2 78316595 78316616 -174939967 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 78316684 78316712 -174939871 + AT_rich Low_complexity Low_complexity 1 28 0 280 333 61 5 chr2 78316894 78317107 -174939476 + L1ME LINE L1 5548 5772 -349 2381 97 0 3 chr2 78317252 78317561 -174939022 + AluSc SINE Alu 1 308 -1 24 53 0 0 chr2 78317702 78317740 -174938843 + AT_rich Low_complexity Low_complexity 1 38 0 499 233 100 20 chr2 78321824 78321974 -174934609 - MIR SINE MIR -93 169 8 421 233 78 0 chr2 78322995 78323098 -174933485 - L2 LINE L2 -13 3300 3190 384 273 223 23 chr2 78323319 78323579 -174933004 + L3 LINE CR1 1079 1390 -187 394 281 14 22 chr2 78324145 78324284 -174932299 + CT-rich Low_complexity Low_complexity 3 140 0 183 267 0 0 chr2 78324443 78324488 -174932095 + L2 LINE L2 3269 3313 0 187 373 28 62 chr2 78324767 78324944 -174931639 + L2 LINE L2 2925 3095 -177 201 176 93 9 chr2 78326481 78326589 -174929994 + CT-rich Low_complexity Low_complexity 5 121 0 762 284 18 41 chr2 78326771 78327112 -174929471 + L1ME4a LINE L1 5599 5931 -190 229 276 67 76 chr2 78327514 78327619 -174928964 + MIR SINE MIR 16 119 -89 189 0 0 0 chr2 78329131 78329152 -174927431 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 201 39 0 0 chr2 78329175 78329201 -174927382 + (CAA)n Simple_repeat Simple_repeat 2 27 0 267 246 16 0 chr2 78332385 78332446 -174924137 + G-rich Low_complexity Low_complexity 6 67 0 187 274 59 0 chr2 78332973 78333024 -174923559 + L2 LINE L2 2707 2760 -554 353 286 97 11 chr2 78333875 78334060 -174922523 - L1ME LINE L1 -299 5822 5622 6238 99 35 6 chr2 78334301 78335586 -174920997 - L1PA15 LINE L1 -13 6803 5550 10635 189 28 60 chr2 78335588 78337937 -174918646 - L1PA15 LINE L1 -1335 5462 3206 195 42 0 0 chr2 78337937 78337961 -174918622 + (TA)n Simple_repeat Simple_repeat 2 25 0 10635 189 28 60 chr2 78337961 78338272 -174918311 - L1PA15 LINE L1 -3591 3206 2887 3915 159 37 14 chr2 78338277 78338661 -174917922 - L1PB1 LINE L1 -243 6624 6250 2141 112 3 0 chr2 78338661 78338948 -174917635 - AluSx SINE Alu -24 288 1 3915 159 37 14 chr2 78338948 78339941 -174916642 - L1PB1 LINE L1 -617 6250 5216 382 118 0 0 chr2 78339932 78339983 -174916600 + L1P LINE L1 4106 4156 -1990 * 4095 165 50 8 chr2 78339978 78340734 -174915849 - L1PB1 LINE L1 -6075 788 1 5411 211 25 5 chr2 78340734 78341876 -174914707 - L1PA15 LINE L1 -4443 2354 1179 313 304 91 88 chr2 78341899 78342218 -174914365 - L1MC/D LINE L1 -2232 5576 5257 259 288 62 42 chr2 78342379 78342648 -174913935 - L1M4 LINE L1 -1092 5054 4769 373 276 48 0 chr2 78342664 78342769 -174913814 + MLT1J2 LTR MaLR 67 176 -274 366 107 0 0 chr2 78342786 78342842 -174913741 + (GA)n Simple_repeat Simple_repeat 1 56 0 527 233 64 29 chr2 78342901 78343073 -174913510 + MLT1I LTR MaLR 232 409 0 339 73 0 0 chr2 78343197 78343238 -174913345 - L1PA13 LINE L1 -5233 1554 1514 372 314 28 16 chr2 78343249 78343504 -174913079 - L1M4 LINE L1 -1536 4610 4353 228 111 0 0 chr2 78343520 78343556 -174913027 + (TG)n Simple_repeat Simple_repeat 1 36 0 991 101 23 0 chr2 78343728 78343857 -174912726 + AluSq/x SINE Alu 1 132 -180 241 25 0 0 chr2 78343857 78343897 -174912686 + Alu SINE Alu 264 303 0 380 298 40 59 chr2 78343957 78344413 -174912170 - L1M4 LINE L1 -2096 4050 3604 257 286 131 0 chr2 78344434 78344518 -174912065 + MER5A DNA MER1_type 18 112 -77 306 352 18 9 chr2 78344569 78344737 -174911846 - MER5B DNA MER1_type 0 189 7 3735 45 7 7 chr2 78344891 78345339 -174911244 - LTR7 LTR ERV1 -2 448 1 2555 77 48 13 chr2 78345339 78345718 -174910865 - HERVH LTR ERV1 0 7713 7322 1428 130 19 0 chr2 78345716 78345932 -174910651 - HERVH LTR ERV1 -1894 5819 5600 * 4382 137 3 5 chr2 78345933 78346596 -174909987 - HERVH LTR ERV1 -2564 5149 4488 3417 113 0 6 chr2 78346625 78347128 -174909455 - HERVH LTR ERV1 -3722 3991 3492 989 120 7 0 chr2 78347118 78347268 -174909315 - HERVH LTR ERV1 -4423 3290 3140 * 20157 91 23 21 chr2 78347247 78350227 -174906356 - HERVH LTR ERV1 -4718 2995 12 3767 49 0 7 chr2 78350247 78350698 -174905885 - LTR7 LTR ERV1 -2 448 1 549 255 60 22 chr2 78350752 78350936 -174905647 - MER112 DNA MER1_type -64 196 6 2840 157 6 32 chr2 78351266 78351629 -174904954 - L1MA7 LINE L1 -25 6266 5918 2249 120 21 51 chr2 78351629 78352004 -174904579 + THE1B LTR MaLR 1 364 0 2840 157 6 32 chr2 78352004 78352144 -174904439 - L1MA7 LINE L1 -373 5918 5776 227 192 0 0 chr2 78352183 78352235 -174904348 + (TA)n Simple_repeat Simple_repeat 1 52 0 483 91 52 0 chr2 78352240 78352317 -174904266 - L1MA7 LINE L1 -500 5791 5711 * 1294 154 23 5 chr2 78352309 78352530 -174904053 + L1MA7 LINE L1 5509 5733 -579 432 67 0 0 chr2 78352909 78352969 -174903614 - L1MA3 LINE L1 -2 6303 6244 223 333 64 81 chr2 78353222 78353456 -174903127 + L2 LINE L2 3039 3268 -4 21 0 0 0 chr2 78354412 78354433 -174902150 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 78354743 78354771 -174901812 + AT_rich Low_complexity Low_complexity 1 28 0 740 295 64 16 chr2 78355119 78355431 -174901152 + L1ME4a LINE L1 5533 5859 -262 21 36 0 0 chr2 78355616 78355644 -174900939 + AT_rich Low_complexity Low_complexity 1 28 0 524 162 21 162 chr2 78356511 78356653 -174899930 + MER5A DNA MER1_type 65 186 -3 892 204 0 0 chr2 78356658 78356815 -174899768 + FRAM SINE Alu 4 160 -16 398 234 56 91 chr2 78356831 78357083 -174899500 - L1MC4 LINE L1 -215 7827 7585 787 168 0 0 chr2 78357177 78357290 -174899293 - FLAM_C SINE Alu -19 124 12 307 250 33 11 chr2 78357297 78357389 -174899194 + L1MC4 LINE L1 7471 7564 -478 305 306 231 42 chr2 78357770 78357986 -174898597 - L2 LINE L2 0 3272 3016 424 170 12 23 chr2 78357987 78358095 -174898488 - MLT1I LTR MaLR -16 434 320 284 255 49 19 chr2 78358071 78358206 -174898377 - MLT1J LTR MaLR -271 178 1 * 1211 186 14 23 chr2 78358591 78358812 -174897771 + MER20 DNA MER1_type 1 219 0 2232 94 59 192 chr2 78359158 78359680 -174896903 - MLT2A2 LTR ERVL 0 453 1 525 328 46 51 chr2 78360247 78360310 -174896273 - MLT1I LTR MaLR 0 409 347 342 0 0 0 chr2 78360310 78360348 -174896235 + (CAA)n Simple_repeat Simple_repeat 2 39 0 525 328 46 51 chr2 78360348 78360677 -174895906 - MLT1I LTR MaLR -62 347 19 479 330 90 56 chr2 78360702 78361240 -174895343 - L2 LINE L2 -257 3015 2468 239 137 118 20 chr2 78361561 78361612 -174894971 + L1ME3A LINE L1 5552 5607 -559 548 222 16 0 chr2 78361612 78361738 -174894845 + MLT2D LTR ERVL 1 128 -286 663 265 0 54 chr2 78361747 78361932 -174894651 + MLT2D LTR ERVL 240 414 0 945 263 39 12 chr2 78361943 78362281 -174894302 + L1ME3A LINE L1 5617 5963 -207 441 36 0 0 chr2 78362617 78362672 -174893911 + (TG)n Simple_repeat Simple_repeat 2 56 0 2102 171 11 3 chr2 78363194 78363556 -174893027 - MLT1A1 LTR MaLR 0 365 1 219 205 0 0 chr2 78365712 78365751 -174890832 - MIR3 SINE MIR -13 195 157 617 304 177 8 chr2 78365780 78366040 -174890543 - L2 LINE L2 -1 3271 2968 184 333 0 17 chr2 78366068 78366128 -174890455 - MIR SINE MIR -131 77 19 352 350 58 82 chr2 78366148 78366841 -174889742 - L2 LINE L2 -70 3202 2522 599 223 9 0 chr2 78366841 78366953 -174889630 - MER81 DNA DNA 0 114 2 352 350 58 82 chr2 78366953 78367062 -174889521 - L2 LINE L2 -750 2522 2412 21 36 0 0 chr2 78367062 78367090 -174889493 + AT_rich Low_complexity Low_complexity 1 28 0 5134 148 40 40 chr2 78367094 78367945 -174888638 - L1PA16 LINE L1 -3 6163 5295 2839 3 0 3 chr2 78367945 78368256 -174888327 - AluYa5 SINE Alu -1 310 1 5134 148 40 40 chr2 78368256 78368323 -174888260 - L1PA16 LINE L1 -870 5296 5230 328 351 0 0 chr2 78368848 78368959 -174887624 - L1M2 LINE L1 -6407 442 332 331 347 4 24 chr2 78369467 78369715 -174886868 - L1MC4 LINE L1 0 8042 7800 303 28 0 0 chr2 78370076 78370112 -174886471 + (CA)n Simple_repeat Simple_repeat 1 36 0 4316 203 64 4 chr2 78370115 78371103 -174885480 + Tigger6a DNA MER2_type 8 1054 -29 348 291 97 62 chr2 78371105 78371394 -174885189 - L1M4 LINE L1 -1333 4813 4515 2102 129 0 0 chr2 78371398 78371693 -174884890 + AluSx SINE Alu 2 296 -16 1160 320 37 25 chr2 78371938 78372510 -174884073 + L1PA13 LINE L1 788 1366 -6208 246 361 8 0 chr2 78372583 78372713 -174883870 + L1PA13 LINE L1 2168 2298 -5276 3734 220 39 57 chr2 78373004 78374238 -174882345 + L1PA13 LINE L1 2177 3418 -4166 2054 100 10 36 chr2 78374238 78374539 -174882044 + AluY SINE Alu 1 293 -18 3734 220 39 57 chr2 78374539 78374804 -174881779 + L1PA13 LINE L1 3418 3686 -3898 1152 272 60 85 chr2 78374960 78376524 -174880059 - L1ME LINE L1 -4174 2087 520 779 221 98 0 chr2 78376711 78376915 -174879668 + MER58A DNA MER1_type 1 224 0 362 21 21 0 chr2 78377527 78377574 -174879009 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 404 269 80 60 chr2 78377575 78377776 -174878807 - L2 LINE L2 -25 3288 3084 228 186 43 14 chr2 78378946 78379016 -174877567 + (TA)n Simple_repeat Simple_repeat 2 73 0 13596 122 16 57 chr2 78379329 78379648 -174876935 - Tigger1 DNA MER2_type -4 2414 2083 2137 133 7 0 chr2 78379648 78379948 -174876635 - AluSx SINE Alu -10 302 1 13596 122 16 57 chr2 78379948 78382027 -174874556 - Tigger1 DNA MER2_type -335 2083 121 1712 122 4 0 chr2 78382027 78382273 -174874310 + AluSg/x SINE Alu 66 312 0 13596 122 16 57 chr2 78382273 78382380 -174874203 - Tigger1 DNA MER2_type -2297 121 11 3253 195 39 4 chr2 78382676 78383393 -174873190 - L1MB2 LINE L1 -3 6168 5427 273 279 62 80 chr2 78383393 78383619 -174872964 + HAL1 LINE L1 445 666 -1841 615 274 118 32 chr2 78383722 78384061 -174872522 + HAL1 LINE L1 1544 1911 -596 195 346 47 9 chr2 78384414 78384521 -174872062 + MIR SINE MIR 35 145 -63 1215 181 0 13 chr2 78385020 78385252 -174871331 - MLT2B1 LTR ERVL -291 229 1 561 271 54 6 chr2 78385584 78385750 -174870833 + MIR SINE MIR 30 203 -59 185 250 0 0 chr2 78385840 78385880 -174870703 + L2 LINE L2 3269 3308 -5 347 309 5 41 chr2 78385895 78386089 -174870494 + LTR33 LTR ERVL 326 512 -9 245 241 45 18 chr2 78386278 78386390 -174870193 + L1ME LINE L1 5711 5825 -296 1263 208 7 115 chr2 78386588 78386997 -174869586 + MLT1A1 LTR MaLR 1 365 0 219 184 184 20 chr2 78387160 78387209 -174869374 + L2 LINE L2 3196 3252 -61 572 280 0 7 chr2 78387232 78387382 -174869201 + L2 LINE L2 3163 3311 -2 2319 107 0 0 chr2 78387424 78387722 -174868861 - AluSq SINE Alu -15 298 1 3910 181 73 25 chr2 78387730 78389534 -174867049 - L1MB7 LINE L1 0 6995 5110 258 45 23 45 chr2 78389534 78389578 -174867005 + LTR9B LTR ERV1 288 330 -314 3093 221 55 39 chr2 78389748 78392063 -174864520 - L1MB7 LINE L1 -4543 2416 18 472 222 0 0 chr2 78392732 78392822 -174863761 - MER81 DNA DNA -24 90 1 688 300 21 17 chr2 78392838 78393071 -174863512 - MIR SINE MIR -15 247 14 3227 264 123 24 chr2 78393230 78394593 -174861990 - L2 LINE L2 -14 3299 1799 288 211 0 0 chr2 78394608 78394660 -174861923 + MER58A DNA MER1_type 18 69 -38 6162 137 33 32 chr2 78394689 78396364 -174860219 - L1MA3 LINE L1 -14 7710 6027 * 15696 147 29 17 chr2 78396341 78399058 -174857525 - L1MA3 LINE L1 -4714 2851 97 1715 181 7 23 chr2 78399058 78399361 -174857222 - AluJb SINE Alu -14 298 1 15696 147 29 17 chr2 78399361 78399440 -174857143 - L1MA3 LINE L1 -7468 97 20 678 217 40 7 chr2 78399442 78399594 -174856989 + MER58A DNA MER1_type 53 209 -15 24 32 0 0 chr2 78399625 78399656 -174856927 + AT_rich Low_complexity Low_complexity 1 31 0 3814 141 32 25 chr2 78399970 78400689 -174855894 - L1MA4 LINE L1 0 6504 5781 2186 136 65 36 chr2 78400689 78401200 -174855383 - MLT2A2 LTR ERVL -6 548 1 12247 180 25 11 chr2 78401201 78402520 -174854063 - L1MA4 LINE L1 -714 5790 4491 1636 183 0 62 chr2 78402520 78402843 -174853740 - AluSx SINE Alu -9 303 1 12247 180 25 11 chr2 78402843 78404539 -174852044 - L1MA4 LINE L1 -2013 4491 2732 994 231 133 25 chr2 78404534 78405244 -174851339 - L1MA4 LINE L1 -4496 1855 1095 * 554 335 63 24 chr2 78405622 78406079 -174850504 - L1MA4 LINE L1 -5804 477 3 1427 274 68 64 chr2 78406388 78407292 -174849291 + L2 LINE L2 2348 3308 -5 630 247 50 22 chr2 78407300 78407482 -174849101 - MIR SINE MIR -28 234 48 240 186 0 0 chr2 78407691 78407750 -174848833 + GA-rich Low_complexity Low_complexity 2 60 0 320 259 25 0 chr2 78408930 78409011 -174847572 - MIR SINE MIR -11 251 169 694 266 122 82 chr2 78409096 78409464 -174847119 - MLT1H LTR MaLR -146 403 21 448 281 31 38 chr2 78409482 78409642 -174846941 - MIR SINE MIR -102 160 2 202 342 79 31 chr2 78409652 78409880 -174846703 + L2 LINE L2 1837 2075 -1239 306 250 0 0 chr2 78410213 78410285 -174846298 + MER116 DNA Mariner 9 80 0 411 262 93 31 chr2 78410633 78410923 -174845660 - L1ME4a LINE L1 -3 6118 5811 511 308 45 99 chr2 78410942 78411367 -174845216 - L1ME4a LINE L1 -426 5695 5294 505 267 147 37 chr2 78411414 78411740 -174844843 - HAL1 LINE L1 0 2507 2146 591 162 170 105 chr2 78411740 78411987 -174844596 + L1MD3 LINE L1 7730 7992 -3 289 282 53 15 chr2 78411993 78412124 -174844459 - HAL1 LINE L1 -353 2154 2019 885 245 45 61 chr2 78412320 78412673 -174843910 - HAL1 LINE L1 -704 1803 1457 2247 102 3 0 chr2 78412673 78412967 -174843616 - AluSp SINE Alu -18 295 1 885 245 45 61 chr2 78412967 78413037 -174843546 - HAL1 LINE L1 -1050 1457 1387 423 0 0 0 chr2 78413044 78413091 -174843492 + (TTCA)n Simple_repeat Simple_repeat 2 48 0 412 193 143 43 chr2 78413134 78413295 -174843288 - HAL1 LINE L1 -1230 1277 1101 290 229 37 73 chr2 78413333 78413442 -174843141 - HAL1 LINE L1 -1610 897 793 1674 208 134 64 chr2 78413775 78414496 -174842087 + L1MC5 LINE L1 6614 7385 -576 310 243 14 0 chr2 78414520 78414590 -174841993 - MER81 DNA DNA -43 71 1 2125 159 8 8 chr2 78414841 78415236 -174841347 - L1MB3 LINE L1 -7 6176 5782 214 217 43 14 chr2 78415236 78415305 -174841278 + (TA)n Simple_repeat Simple_repeat 2 72 0 232 260 227 7 chr2 78416452 78416606 -174839977 - MIR SINE MIR -66 196 9 233 342 120 17 chr2 78417503 78417620 -174838963 - L2 LINE L2 -7 3265 3137 1172 167 14 19 chr2 78417720 78417935 -174838648 + MER20 DNA MER1_type 5 218 -1 203 0 37 0 chr2 78418031 78418058 -174838525 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 2254 93 13 3 chr2 78418291 78418592 -174837991 + AluSg SINE Alu 5 308 -2 4228 78 4 0 chr2 78420265 78420817 -174835766 + MER41A LTR ERV1 1 554 0 615 310 148 3 chr2 78420861 78421193 -174835390 - MLT1I LTR MaLR -26 383 4 226 233 17 17 chr2 78421198 78421258 -174835325 - L2 LINE L2 -327 2945 2886 1202 225 86 80 chr2 78421957 78422455 -174834128 - MLT1D LTR MaLR 0 505 5 513 224 36 103 chr2 78422463 78422744 -174833839 + L1ME LINE L1 898 1159 -5475 1549 186 105 107 chr2 78422774 78423382 -174833201 + MER76 LTR ERV 49 655 -33 921 275 62 26 chr2 78423395 78424169 -174832414 + L1ME LINE L1 1030 1832 -4814 1142 261 76 30 chr2 78424645 78425039 -174831544 - L2 LINE L2 -2 3311 2900 2388 249 74 4 chr2 78425530 78426244 -174830339 + Zaphod DNA AcHobo 1 764 -3267 24 85 0 0 chr2 78426303 78426362 -174830221 + AT_rich Low_complexity Low_complexity 1 59 0 1213 204 78 6 chr2 78426431 78426775 -174829808 + Zaphod DNA AcHobo 3654 4022 -9 366 291 53 55 chr2 78426963 78427154 -174829429 + MIR3 SINE MIR 8 219 -43 1955 191 79 55 chr2 78427884 78428286 -174828297 - MLT1D LTR MaLR 0 505 87 2289 104 13 0 chr2 78428286 78428594 -174827989 - AluSx SINE Alu 0 312 1 1955 191 79 55 chr2 78428594 78428684 -174827899 - MLT1D LTR MaLR -418 87 1 1586 225 67 8 chr2 78428841 78429215 -174827368 + MSTD LTR MaLR 1 396 0 1494 203 68 11 chr2 78429484 78429853 -174826730 - MLT1B LTR MaLR 0 390 1 721 335 136 20 chr2 78430027 78430483 -174826100 - L2 LINE L2 -343 2971 2463 685 317 151 37 chr2 78430767 78431285 -174825298 + L3 LINE CR1 440 1016 -561 203 229 21 0 chr2 78431285 78431333 -174825250 + (TA)n Simple_repeat Simple_repeat 1 49 0 279 301 24 0 chr2 78431452 78431535 -174825048 - L2 LINE L2 -1 3312 3228 206 343 105 41 chr2 78431580 78431752 -174824831 + L3 LINE CR1 1268 1450 -127 714 291 84 9 chr2 78431982 78432422 -174824161 - L1ME4a LINE L1 -200 5921 5449 30 83 0 0 chr2 78432686 78432758 -174823825 + AT_rich Low_complexity Low_complexity 1 72 0 358 318 161 47 chr2 78433004 78433259 -174823324 + L1ME LINE L1 5529 5812 -309 1781 236 75 43 chr2 78433275 78434038 -174822545 + HAL1 LINE L1 1063 1849 -658 351 271 0 10 chr2 78434354 78434450 -174822133 - MIR SINE MIR -44 218 124 428 297 0 0 chr2 78434519 78434657 -174821926 + HAL1 LINE L1 2074 2211 -296 258 322 0 17 chr2 78434738 78434856 -174821727 + (TATG)n Simple_repeat Simple_repeat 4 119 0 365 208 50 117 chr2 78436140 78436260 -174820323 + MER81 DNA DNA 1 112 -2 447 298 86 0 chr2 78436593 78436791 -174819792 - Charlie8 DNA MER1_type -2152 265 51 2262 92 0 0 chr2 78437651 78437964 -174818619 + AluSp SINE Alu 1 313 0 251 320 39 19 chr2 78437964 78438067 -174818516 + MER5A DNA MER1_type 64 168 -21 333 307 73 0 chr2 78438726 78438876 -174817707 + L1ME LINE L1 5522 5682 -439 13555 131 76 9 chr2 78438944 78440363 -174816220 + Tigger1 DNA MER2_type 3 1631 -787 2105 119 7 7 chr2 78440363 78440658 -174815925 - AluSx SINE Alu -17 295 1 13555 131 76 9 chr2 78440658 78441503 -174815080 + Tigger1 DNA MER2_type 1631 2418 0 279 0 0 0 chr2 78442502 78442533 -174814050 + (TG)n Simple_repeat Simple_repeat 2 32 0 802 213 40 15 chr2 78442685 78442887 -174813696 + Tigger1 DNA MER2_type 2212 2418 0 1224 271 147 11 chr2 78445824 78446286 -174810297 + MER69B DNA AcHobo 1 525 -701 511 212 245 4 chr2 78446283 78446528 -174810055 + MER69B DNA AcHobo 768 1071 -155 * 434 217 100 0 chr2 78446695 78446815 -174809768 + MER69B DNA AcHobo 1086 1217 -9 2088 102 7 3 chr2 78447424 78447755 -174808828 + AluSx SINE Alu 1 332 0 2685 282 79 14 chr2 78447880 78448371 -174808212 - L2 LINE L2 -5 3308 2850 4004 135 11 63 chr2 78448371 78449099 -174807484 + LTR8 LTR ERV1 2 691 0 2685 282 79 14 chr2 78449099 78449778 -174806805 - L2 LINE L2 -463 2850 2054 2416 84 0 0 chr2 78451667 78451965 -174804618 - AluY SINE Alu -13 298 1 379 294 42 21 chr2 78453455 78453598 -174802985 + MIR SINE MIR 1 146 -116 204 218 0 36 chr2 78453650 78453705 -174802878 + (TTA)n Simple_repeat Simple_repeat 2 54 0 2124 137 0 0 chr2 78453781 78454073 -174802510 + AluSx SINE Alu 1 292 -20 412 213 43 0 chr2 78454312 78454406 -174802177 - Tigger7 DNA MER2_type -2 2485 2388 1460 199 0 11 chr2 78454411 78454673 -174801910 - Tigger7 DNA MER2_type -474 259 1 180 111 0 0 chr2 78454679 78454706 -174801877 + (CA)n Simple_repeat Simple_repeat 2 28 0 258 222 22 22 chr2 78454710 78454734 -174801849 + (TA)n Simple_repeat Simple_repeat 1 24 -66 2695 130 7 25 chr2 78454734 78455172 -174801411 + Tigger2a DNA MER2_type 5 434 0 258 222 22 22 chr2 78455172 78455237 -174801346 + (TA)n Simple_repeat Simple_repeat 23 90 0 225 0 0 0 chr2 78455238 78455263 -174801320 + (TG)n Simple_repeat Simple_repeat 2 26 0 262 178 41 14 chr2 78455469 78455542 -174801041 - MLT1K LTR MaLR -355 233 159 614 303 48 21 chr2 78457415 78457705 -174798878 - MARNA DNA Mariner -16 570 273 40 0 0 0 chr2 78457732 78457772 -174798811 + AT_rich Low_complexity Low_complexity 1 40 0 531 262 108 35 chr2 78458131 78458351 -174798232 + MIR SINE MIR 6 240 -22 5681 24 6 0 chr2 78459587 78460305 -174796278 - L1PA3 LINE L1 -3172 2974 2253 * 18341 28 0 0 chr2 78460296 78463487 -174793096 + L1PA3 LINE L1 2964 6155 0 218 119 24 0 chr2 78463868 78463910 -174792673 + (TA)n Simple_repeat Simple_repeat 1 43 0 1753 157 6 38 chr2 78464231 78464549 -174792034 + AluSx SINE Alu 3 310 -2 188 179 77 0 chr2 78465652 78465691 -174790892 + MER5B DNA MER1_type 136 177 -1 * 403 250 40 0 chr2 78465691 78465789 -174790794 + MER5A DNA MER1_type 11 112 -77 222 216 255 39 chr2 78465712 78465814 -174790769 - MER5A DNA MER1_type -23 166 43 * 278 203 8 144 chr2 78466028 78466077 -174790506 - MER5A DNA MER1_type -25 164 139 1020 47 31 0 chr2 78466077 78466206 -174790377 + L1PA11 LINE L1 6041 6173 -1 278 203 8 144 chr2 78466206 78466274 -174790309 - MER5A DNA MER1_type -50 139 63 2109 178 25 2 chr2 78466418 78466865 -174789718 - MER89 LTR ERV1 -2 557 1 236 319 28 0 chr2 78466869 78466941 -174789642 + MER5A DNA MER1_type 82 155 -34 247 220 0 0 chr2 78467471 78467521 -174789062 - Charlie8 DNA MER1_type -989 1428 1379 678 275 163 41 chr2 78467540 78468005 -174788578 - Charlie8 DNA MER1_type -1893 524 3 21 57 0 0 chr2 78470381 78470416 -174786167 + AT_rich Low_complexity Low_complexity 1 35 0 398 385 66 14 chr2 78471280 78471493 -174785090 - L2 LINE L2 -18 3254 3031 41 21 0 0 chr2 78472783 78472831 -174783752 + AT_rich Low_complexity Low_complexity 1 48 0 424 272 209 24 chr2 78473923 78474382 -174782201 - L1M4 LINE L1 -2688 3458 2915 628 270 168 30 chr2 78474829 78475229 -174781354 - MLT1K LTR MaLR -2 586 132 432 250 48 24 chr2 78476176 78476300 -174780283 - L2 LINE L2 0 3272 3146 1625 279 79 16 chr2 78476500 78477017 -174779566 + MER115 DNA AcHobo 144 693 0 1985 166 11 25 chr2 78478601 78478969 -174777614 + MLT1A1 LTR MaLR 1 363 -2 597 266 113 5 chr2 78479190 78479393 -174777190 - MIR SINE MIR -37 225 1 204 280 11 75 chr2 78479592 78479685 -174776898 - L2 LINE L2 0 3272 3186 234 308 75 15 chr2 78479748 78479881 -174776702 + L2 LINE L2 2501 2641 -673 259 354 99 58 chr2 78480026 78480269 -174776314 - L2 LINE L2 -2 3270 3018 265 343 39 0 chr2 78481205 78481307 -174775276 - MIR SINE MIR -136 126 21 378 0 0 0 chr2 78481591 78481633 -174774950 + (TAA)n Simple_repeat Simple_repeat 2 43 0 183 100 0 0 chr2 78482010 78482040 -174774543 + (TC)n Simple_repeat Simple_repeat 1 30 0 1736 238 65 15 chr2 78482664 78482806 -174773777 + L1ME1 LINE L1 5666 5799 -367 2377 171 39 12 chr2 78482806 78483221 -174773362 - MSTB LTR MaLR 0 426 1 1736 238 65 15 chr2 78483221 78483553 -174773030 + L1ME1 LINE L1 5799 6164 -2 384 248 105 0 chr2 78483554 78483659 -174772924 + MER5B DNA MER1_type 31 146 -32 90 19 0 0 chr2 78484221 78484325 -174772258 + AT_rich Low_complexity Low_complexity 1 104 0 189 0 0 0 chr2 78484946 78484967 -174771616 + (T)n Simple_repeat Simple_repeat 1 21 0 396 343 39 31 chr2 78486050 78486304 -174770279 + MIR SINE MIR 2 257 -5 2798 200 48 0 chr2 78486729 78486768 -174769815 - MLT2B3 LTR ERVL -3 551 515 293 47 23 0 chr2 78486768 78486811 -174769772 + (TAGA)n Simple_repeat Simple_repeat 3 46 0 2798 200 48 0 chr2 78486811 78487083 -174769500 - MLT2B3 LTR ERVL -39 515 202 381 22 0 0 chr2 78487083 78487129 -174769454 + (GA)n Simple_repeat Simple_repeat 1 46 0 2798 200 48 0 chr2 78487129 78487342 -174769241 - MLT2B3 LTR ERVL -352 202 1 1522 218 19 111 chr2 78487620 78488295 -174768288 - L1MC5 LINE L1 -576 7385 6773 391 357 7 0 chr2 78488452 78488606 -174767977 + L1 LINE L1 2423 2577 -3569 1008 186 27 57 chr2 78488609 78488872 -174767711 - MLT1C LTR MaLR -212 255 1 6145 89 67 5 chr2 78488892 78489555 -174767028 - L1PA13 LINE L1 -4 6159 5538 236 0 88 0 chr2 78489555 78489589 -174766994 + T-rich Low_complexity Low_complexity 1 37 0 2115 99 4 0 chr2 78489589 78489861 -174766722 - AluSc SINE Alu -36 273 1 6145 89 67 5 chr2 78489861 78490329 -174766254 - L1PA13 LINE L1 -624 5539 5006 1831 302 81 20 chr2 78490329 78491719 -174764864 + L1P5 LINE L1 4038 5515 -636 345 64 0 0 chr2 78491746 78491793 -174764790 - MADE1 DNA Mariner -3 77 31 1141 261 48 24 chr2 78491814 78492274 -174764309 + L1ME3A LINE L1 5693 6163 -7 509 281 78 20 chr2 78492503 78492656 -174763927 - MER5B DNA MER1_type -9 169 8 580 345 24 44 chr2 78492656 78493114 -174763469 + ERVL LTR ERVL 1220 1668 -3986 463 291 0 10 chr2 78493796 78493899 -174762684 + MER5A DNA MER1_type 86 187 -2 12134 210 63 7 chr2 78494110 78496162 -174760421 - L1PA16 LINE L1 -9 6860 4925 2586 47 0 0 chr2 78496162 78496459 -174760124 - AluY SINE Alu -4 307 11 12134 210 63 7 chr2 78496459 78498522 -174758061 - L1PA16 LINE L1 -1944 4925 2528 387 0 0 0 chr2 78499503 78499546 -174757037 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1240 146 5 0 chr2 78499547 78499739 -174756844 - L1PA16 LINE L1 -4307 2542 2350 36573 99 8 8 chr2 78500057 78506194 -174750389 - L1PA6 LINE L1 -7 6147 11 849 358 24 9 chr2 78506432 78506851 -174749732 + ERVL LTR ERVL 3285 3709 -2055 1818 306 42 29 chr2 78506907 78507711 -174748872 + ERVL LTR ERVL 3841 4655 -1109 490 291 58 19 chr2 78507758 78507964 -174748619 + ERVL LTR ERVL 4705 4918 -736 1815 258 137 28 chr2 78508090 78508842 -174747741 + L1ME3 LINE L1 5320 6153 -9 509 267 59 11 chr2 78509126 78509313 -174747270 + LTR67 LTR ERVL 360 555 -2 710 358 74 44 chr2 78509440 78510139 -174746444 - L2 LINE L2 -430 2884 2165 1137 128 0 0 chr2 78510214 78510394 -174746189 + (TA)n Simple_repeat Simple_repeat 1 180 0 236 111 0 0 chr2 78510405 78510450 -174746133 - LTR66 LTR ERVL -171 439 395 243 61 0 0 chr2 78510459 78510492 -174746091 + (CA)n Simple_repeat Simple_repeat 2 34 0 233 250 54 22 chr2 78510655 78510747 -174745836 - MLT1L LTR MaLR -25 590 496 247 330 45 18 chr2 78510756 78510868 -174745715 - MLT1J LTR MaLR -169 342 228 930 264 22 35 chr2 78510886 78511348 -174745235 + MLT1H LTR MaLR 1 525 -24 497 272 89 0 chr2 78511410 78511568 -174745015 + HAL1 LINE L1 2 173 -2334 616 149 0 28 chr2 78511705 78511812 -174744771 + LTR28 LTR ERV1 1 104 -916 1982 189 22 62 chr2 78511869 78512440 -174744143 + LTR27 LTR ERV1 89 697 -138 303 318 172 10 chr2 78512510 78512702 -174743881 - L1 LINE L1 -1819 4327 4105 413 218 98 53 chr2 78512741 78512874 -174743709 + L1ME2 LINE L1 6007 6145 -19 1577 158 41 75 chr2 78513054 78513441 -174743142 + MLT1A2 LTR MaLR 1 374 0 548 306 63 44 chr2 78513956 78514319 -174742264 - L1 LINE L1 -3045 3101 2732 359 341 29 24 chr2 78514442 78514688 -174741895 - L1 LINE L1 -3631 2515 2269 928 185 8 51 chr2 78514832 78515086 -174741497 - L1MB8 LINE L1 0 6178 5936 1097 267 52 16 chr2 78515086 78515513 -174741070 - L1M4 LINE L1 -2078 4879 4438 2952 238 53 27 chr2 78515525 78516410 -174740173 - L1M4 LINE L1 -5180 1679 772 698 224 81 14 chr2 78516426 78516636 -174739947 + L1M4b LINE L1 24 247 -6612 * 1596 168 13 0 chr2 78516635 78516938 -174739645 + L1 LINE L1 3743 4049 -2097 2307 148 8 36 chr2 78516939 78517409 -174739174 - MER50-int LTR ERV1 -2145 2870 2063 6287 90 2 0 chr2 78517411 78518972 -174737611 - L1PA8 LINE L1 -3 6169 4594 2036 127 0 0 chr2 78518972 78519288 -174737295 - L1PA8 LINE L1 -1772 4374 4059 2722 146 14 18 chr2 78519328 78519821 -174736762 - MER50-int LTR ERV1 -804 4076 3586 627 212 0 0 chr2 78519818 78519931 -174736652 - MER50-int LTR ERV1 -4305 2900 2788 * 5739 162 21 38 chr2 78519927 78520877 -174735706 - MER50-int LTR ERV1 -5355 1850 866 2380 102 0 6 chr2 78520877 78521190 -174735393 + AluY SINE Alu 1 311 0 5739 162 21 38 chr2 78521190 78522041 -174734542 - MER50-int LTR ERV1 -6339 866 1 3213 183 54 15 chr2 78522042 78522726 -174733857 - MER50 LTR ERV1 -23 711 1 2560 237 27 5 chr2 78522726 78523477 -174733106 + L1PB2 LINE L1 2859 3625 -2521 2997 100 53 0 chr2 78523477 78523907 -174732676 - MLT2A2 LTR ERVL 0 453 1 20635 73 5 2 chr2 78523907 78526668 -174729915 - HERVL-A2 LTR ERVL 0 5654 2887 7995 86 2 38 chr2 78526673 78527892 -174728691 - HERVL-A2 LTR ERVL -4479 1175 1 3161 91 36 2 chr2 78527892 78528330 -174728253 - MLT2A2 LTR ERVL 0 453 1 7535 150 8 26 chr2 78528335 78529868 -174726715 + L1PB2 LINE L1 3625 5093 -1058 2336 128 25 8 chr2 78529868 78530226 -174726357 + THE1B LTR MaLR 1 364 0 7535 150 8 26 chr2 78530226 78531265 -174725318 + L1PB2 LINE L1 5093 6149 -2 1415 178 7 0 chr2 78531273 78531554 -174725029 + L1 LINE L1 4318 4600 -1546 1920 123 70 50 chr2 78532084 78532441 -174724142 + THE1B LTR MaLR 1 364 0 340 290 92 49 chr2 78532441 78533069 -174723514 - HAL1b LINE L1 -523 825 135 4442 140 14 32 chr2 78533143 78533957 -174722626 - L1MA5 LINE L1 -5 6295 5497 772 92 92 7 chr2 78533957 78534098 -174722485 + L1MA5 LINE L1 6143 6295 -5 2164 165 24 29 chr2 78534118 78534628 -174721955 + L1 LINE L1 4358 4864 -1282 1709 192 11 22 chr2 78534730 78535090 -174721493 - MLT1C LTR MaLR 0 467 112 604 81 12 0 chr2 78535101 78535187 -174721396 - AluSp/q SINE Alu -18 295 209 315 282 111 0 chr2 78535478 78535595 -174720988 + HsTC2 DNA Tc2 1 130 -1768 984 172 10 0 chr2 78535609 78535812 -174720771 + L1 LINE L1 4481 4685 -1461 2083 247 11 6 chr2 78535813 78536339 -174720244 + HsTC2 DNA Tc2 132 660 -1238 24 32 0 0 chr2 78537838 78537869 -174718714 + AT_rich Low_complexity Low_complexity 1 31 0 576 282 70 78 chr2 78538668 78539026 -174717557 - HAL1 LINE L1 -1635 872 518 356 242 42 0 chr2 78539946 78540041 -174716542 + MIR SINE MIR 108 206 -56 242 328 0 0 chr2 78540163 78540224 -174716359 - L3 LINE CR1 -157 1420 1360 443 271 42 73 chr2 78540341 78540699 -174715884 - L1MEc LINE L1 -4637 1759 1413 3032 248 116 22 chr2 78540750 78542728 -174713855 + L1M4 LINE L1 1246 3104 -4002 3652 135 36 6 chr2 78542732 78543370 -174713213 + L1MA8 LINE L1 5628 6284 -7 1527 215 30 94 chr2 78543470 78544004 -174712579 - MLT1D LTR MaLR 0 505 6 1962 139 23 57 chr2 78544732 78545120 -174711463 - THE1C LTR MaLR 0 375 1 772 347 160 34 chr2 78545289 78546065 -174710518 + L3 LINE CR1 693 1566 -11 475 309 89 34 chr2 78546495 78546819 -174709764 + LTR16C LTR ERVL 150 491 0 198 136 0 0 chr2 78547219 78547263 -174709320 + (A)n Simple_repeat Simple_repeat 1 44 0 262 349 61 30 chr2 78548744 78548876 -174707707 - MIR3 SINE MIR -2 206 71 189 378 103 6 chr2 78549165 78549321 -174707262 - L2 LINE L2 0 3272 3102 229 190 0 0 chr2 78549921 78549979 -174706604 + L1M4 LINE L1 4842 4899 -2207 377 280 0 0 chr2 78550010 78550110 -174706473 - U13 snRNA snRNA -4 100 1 407 349 48 11 chr2 78550345 78550534 -174706049 + L2 LINE L2 3117 3312 -1 325 278 61 33 chr2 78550549 78550729 -174705854 + L1M4 LINE L1 17 201 -6341 253 296 0 31 chr2 78551134 78551232 -174705351 + L1M4 LINE L1 786 880 -5662 313 322 144 7 chr2 78551295 78551441 -174705142 + L1M4 LINE L1 895 1060 -5486 408 90 0 0 chr2 78551461 78551528 -174705055 - AluSp SINE Alu 0 313 247 1543 88 5 0 chr2 78551529 78551723 -174704860 - AluSp SINE Alu -116 197 3 267 148 91 102 chr2 78551724 78551812 -174704771 + L1M4 LINE L1 1046 1132 -5410 330 272 150 0 chr2 78551983 78552163 -174704420 + LTR33A LTR ERVL 263 469 -54 580 246 18 18 chr2 78552169 78552340 -174704243 - L1MC/D LINE L1 -2040 5768 5598 298 265 80 13 chr2 78553300 78553449 -174703134 - L1ME LINE L1 -5913 157 2 2348 149 17 15 chr2 78554165 78554575 -174702008 - Tigger2a DNA MER2_type 0 434 24 3862 146 14 32 chr2 78554662 78554707 -174701876 + L1MA9 LINE L1 5432 5476 -836 396 103 0 0 chr2 78554707 78554765 -174701818 + (CA)n Simple_repeat Simple_repeat 2 59 0 3862 146 14 32 chr2 78554765 78555092 -174701491 + L1MA9 LINE L1 5476 5808 -504 1588 175 100 6 chr2 78555092 78555423 -174701160 + MLT1A1 LTR MaLR 2 363 -2 3862 146 14 32 chr2 78555423 78555787 -174700796 + L1MA9 LINE L1 5808 6155 -157 372 180 54 63 chr2 78555820 78555931 -174700652 + L1MA10 LINE L1 6094 6203 -131 327 246 0 0 chr2 78555963 78556028 -174700555 - MER5A DNA MER1_type -1 188 124 231 340 21 35 chr2 78556032 78556173 -174700410 - LTR27 LTR ERV1 0 636 498 3165 193 82 54 chr2 78556200 78557045 -174699538 - LTR28 LTR ERV1 -67 953 86 513 193 14 117 chr2 78557076 78557145 -174699438 - MER5A DNA MER1_type -59 130 82 180 0 0 0 chr2 78557154 78557174 -174699409 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 4660 86 5 3 chr2 78557174 78557803 -174698780 - L1PA10 LINE L1 -18 6150 5518 513 193 14 117 chr2 78557803 78557878 -174698705 - MER5A DNA MER1_type -107 82 1 330 138 31 0 chr2 78557932 78557997 -174698586 + L1M4 LINE L1 5004 5070 -1076 254 363 90 11 chr2 78558152 78558297 -174698286 - L2 LINE L2 -1455 1859 1727 417 20 0 0 chr2 78558297 78558347 -174698236 + (TG)n Simple_repeat Simple_repeat 2 51 0 254 363 90 11 chr2 78558347 78558468 -174698115 - L2 LINE L2 -1587 1727 1572 2199 205 33 2 chr2 78561281 78561732 -174694851 - MLT1D LTR MaLR -1 504 40 803 137 0 0 chr2 78561732 78561856 -174694727 - MER4E LTR ERV1 0 766 643 1946 86 21 11 chr2 78561856 78562248 -174694335 + LTR7 LTR ERV1 1 442 -8 2122 135 62 85 chr2 78562255 78562759 -174693824 - MER4B LTR ERV1 -118 492 1 2195 157 35 39 chr2 78562884 78563316 -174693267 - MSTB1 LTR MaLR -2 430 1 273 244 23 12 chr2 78563418 78563504 -174693079 - Charlie8 DNA MER1_type -2239 178 92 991 215 3 26 chr2 78563638 78563937 -174692646 + L1MD1 LINE L1 5194 5487 -750 5321 157 26 11 chr2 78563941 78564897 -174691686 + L1P3 LINE L1 11 981 -4894 10052 97 28 3 chr2 78564897 78567148 -174689435 + L1PA8 LINE L1 3900 6170 -2 6064 116 2 13 chr2 78567135 78568342 -174688241 + L1PA8 LINE L1 4976 6172 0 * 2718 36 15 3 chr2 78568353 78568686 -174687897 - L1PA5 LINE L1 0 6154 5818 27 0 0 0 chr2 78568691 78568718 -174687865 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr2 78569185 78569213 -174687370 + AT_rich Low_complexity Low_complexity 1 28 0 381 229 114 17 chr2 78569287 78569462 -174687121 - L1ME3A LINE L1 -214 5956 5765 3643 163 60 9 chr2 78569474 78570210 -174686373 + L1MD1 LINE L1 5470 6242 0 553 191 72 62 chr2 78570636 78570830 -174685753 - HsTC2 DNA Tc2 0 1900 1705 884 203 27 45 chr2 78570938 78571160 -174685423 - MER20 DNA MER1_type -1 218 1 244 278 43 26 chr2 78571305 78571420 -174685163 - L1ME3A LINE L1 -2019 5789 5673 309 203 163 24 chr2 78572184 78572307 -174684276 - MER112 DNA MER1_type -43 217 78 183 184 0 0 chr2 78572318 78572356 -174684227 + (CA)n Simple_repeat Simple_repeat 1 38 0 261 163 0 0 chr2 78572383 78572426 -174684157 - MER112 DNA MER1_type -217 43 1 709 316 61 18 chr2 78572447 78572776 -174683807 - LTR16B LTR ERVL 0 464 122 227 294 0 0 chr2 78572945 78572996 -174683587 + MIR SINE MIR 17 67 -195 315 260 154 0 chr2 78572996 78573119 -174683464 - MER96 DNA MER1_type? 0 175 34 4657 96 19 22 chr2 78573119 78573508 -174683075 + L1PB3 LINE L1 5469 5858 -296 243 0 0 0 chr2 78573508 78573535 -174683048 + (TC)n Simple_repeat Simple_repeat 2 28 0 2130 121 3 3 chr2 78573535 78573832 -174682751 - AluSp SINE Alu -16 297 1 4657 96 19 22 chr2 78573832 78574129 -174682454 + L1PB3 LINE L1 5856 6154 0 435 192 88 93 chr2 78574147 78574329 -174682254 + MIR SINE MIR 56 236 -26 404 234 7 95 chr2 78574379 78574516 -174682067 - MER5A DNA MER1_type -48 141 17 703 260 82 19 chr2 78575534 78575742 -174680841 - MIR SINE MIR -13 249 29 701 272 21 11 chr2 78576252 78576443 -174680140 - MIR SINE MIR -18 244 52 220 294 35 35 chr2 78576704 78576789 -174679794 - L2 LINE L2 -6 3307 3223 342 80 0 0 chr2 78577252 78577302 -174679281 + (TG)n Simple_repeat Simple_repeat 2 51 0 435 162 214 8 chr2 78577931 78578048 -174678535 - MLT1F LTR MaLR 0 542 402 636 154 0 0 chr2 78578050 78578141 -174678442 - AluS SINE Alu -221 91 1 906 241 77 36 chr2 78578150 78578486 -174678097 - MLT1F LTR MaLR -169 373 24 2277 82 17 0 chr2 78579296 78579588 -174676995 + AluSp SINE Alu 1 297 -16 1074 256 108 60 chr2 78579657 78580293 -174676290 + L1ME LINE L1 30 696 -5374 1929 157 13 3 chr2 78580325 78580625 -174675958 + AluSx SINE Alu 1 303 -9 2491 69 0 0 chr2 78580642 78580948 -174675635 + AluY SINE Alu 1 306 -5 1026 264 89 50 chr2 78580951 78581679 -174674904 + L1ME LINE L1 839 1595 -4485 421 161 25 0 chr2 78581782 78581863 -174674720 + L1MA5 LINE L1 6218 6300 0 538 286 10 14 chr2 78581865 78582094 -174674489 + L1ME LINE L1 3429 3656 -2424 21 0 0 0 chr2 78582394 78582415 -174674168 + AT_rich Low_complexity Low_complexity 1 21 0 1299 161 28 39 chr2 78582432 78582717 -174673866 - THE1C LTR MaLR 0 375 94 2739 200 56 80 chr2 78582732 78583706 -174672877 - L1MC4a LINE L1 -416 7392 6501 248 306 42 0 chr2 78584655 78584727 -174671856 - L2 LINE L2 -10 3262 3188 188 311 0 54 chr2 78584804 78584878 -174671705 + MER5A DNA MER1_type 46 115 -74 * 242 243 68 68 chr2 78584813 78584887 -174671696 - MER5B DNA MER1_type -44 145 72 288 367 38 38 chr2 78584895 78585105 -174671478 - L2 LINE L2 -235 3037 2828 231 119 48 0 chr2 78585194 78585236 -174671347 - L2 LINE L2 0 3313 3270 189 279 0 0 chr2 78585775 78585843 -174670740 + CT-rich Low_complexity Low_complexity 4 71 0 1778 181 19 24 chr2 78586161 78586536 -174670047 - MLT1A2 LTR MaLR 0 374 2 2522 70 0 13 chr2 78586839 78587154 -174669429 - AluY SINE Alu 0 311 1 413 343 140 3 chr2 78588129 78588485 -174668098 - L2 LINE L2 -416 2898 2494 317 214 101 11 chr2 78588490 78588579 -174668004 + L1ME4a LINE L1 6007 6103 -18 26 30 0 0 chr2 78588579 78588612 -174667971 + AT_rich Low_complexity Low_complexity 1 33 0 884 293 38 20 chr2 78589932 78590325 -174666258 + L1ME1 LINE L1 5749 6148 -18 1827 175 70 34 chr2 78590646 78591087 -174665496 + LTR2B LTR ERV1 34 490 0 4711 154 16 22 chr2 78591508 78592418 -174664165 - L1MA7 LINE L1 -2 6289 5385 180 0 0 0 chr2 78593659 78593679 -174662904 + (TG)n Simple_repeat Simple_repeat 2 21 0 1886 180 29 42 chr2 78594830 78595281 -174661302 + MER65A LTR ERV1 1 445 0 1303 238 97 52 chr2 78595336 78595895 -174660688 + MER65A-int LTR ERV1 57 640 -4231 258 301 45 19 chr2 78596120 78596276 -174660307 + L1ME3A LINE L1 4038 4197 -1949 569 266 78 30 chr2 78596462 78596834 -174659749 + L1ME3A LINE L1 4536 4925 -1221 1425 275 36 9 chr2 78596898 78597608 -174658975 + L1ME3A LINE L1 5188 5916 -254 306 267 126 7 chr2 78598977 78599112 -174657471 + L2 LINE L2 2162 2312 -1002 374 264 0 0 chr2 78599312 78599399 -174657184 + L2 LINE L2 2567 2653 -661 565 269 148 17 chr2 78601407 78601617 -174654966 - MIR SINE MIR -22 240 10 1313 183 51 90 chr2 78601990 78602345 -174654238 - MER58B DNA MER1_type 0 341 1 296 282 63 35 chr2 78602469 78602611 -174653972 + MER5B DNA MER1_type 3 148 -30 701 258 102 23 chr2 78602617 78602873 -174653710 + Charlie7 DNA MER1_type 2 277 -2335 427 241 71 0 chr2 78602910 78603051 -174653532 + L1ME LINE L1 4665 4815 -1331 820 297 42 34 chr2 78603151 78603933 -174652650 + L1ME LINE L1 4992 5787 -375 471 235 9 0 chr2 78604486 78604601 -174651982 - MER94 DNA DNA -15 119 4 353 275 45 45 chr2 78604897 78605047 -174651536 + MER5B DNA MER1_type 8 168 -21 2383 82 0 10 chr2 78605862 78606167 -174650416 - AluSc SINE Alu -7 302 1 202 302 85 108 chr2 78606538 78606667 -174649916 + MER5B DNA MER1_type 3 128 -50 314 247 204 0 chr2 78606702 78606795 -174649788 + MER81 DNA DNA 1 112 -2 377 252 44 44 chr2 78608241 78608376 -174648207 - MIR SINE MIR -108 154 20 401 331 76 5 chr2 78608727 78608911 -174647672 - L2 LINE L2 -2806 508 312 990 206 66 101 chr2 78608965 78609013 -174647570 - MLT1A1 LTR MaLR 0 365 317 2175 116 0 3 chr2 78609013 78609306 -174647277 - AluSx SINE Alu -15 297 6 990 206 66 101 chr2 78609306 78609635 -174646948 - MLT1A1 LTR MaLR -48 317 1 230 229 0 0 chr2 78610344 78610405 -174646178 + T-rich Low_complexity Low_complexity 1 61 0 1536 138 43 113 chr2 78612738 78613135 -174643448 + THE1C LTR MaLR 7 375 0 627 223 304 16 chr2 78613195 78613227 -174643356 - L2 LINE L2 0 3313 3291 1957 115 101 24 chr2 78613227 78613565 -174643018 + THE1B LTR MaLR 1 364 0 627 223 304 16 chr2 78613565 78613779 -174642804 - L2 LINE L2 -22 3291 2996 313 233 107 47 chr2 78613783 78613933 -174642650 - MER117 DNA MER1_type -35 162 4 2101 133 36 30 chr2 78614051 78614413 -174642170 - THE1B LTR MaLR 0 364 1 21 0 0 0 chr2 78614827 78614848 -174641735 + AT_rich Low_complexity Low_complexity 1 21 0 212 214 179 0 chr2 78614920 78614976 -174641607 + L2 LINE L2 1892 1957 -1357 289 315 20 27 chr2 78615050 78615199 -174641384 + L2 LINE L2 2139 2286 -1028 585 245 94 97 chr2 78615263 78615452 -174641131 - MLT1K LTR MaLR -16 572 383 420 20 0 0 chr2 78615452 78615501 -174641082 + (TG)n Simple_repeat Simple_repeat 1 49 0 585 245 94 97 chr2 78615501 78615682 -174640901 - MLT1K LTR MaLR -205 383 203 2195 87 0 4 chr2 78615977 78616252 -174640331 - AluSq SINE Alu -39 274 1 254 308 30 38 chr2 78616294 78616427 -174640156 + L2 LINE L2 2439 2570 -744 282 304 174 0 chr2 78617722 78617837 -174638746 - L2 LINE L2 -1 3271 3137 2180 204 94 15 chr2 78619194 78619660 -174636923 - MLT1D LTR MaLR -2 503 1 580 247 15 14 chr2 78619733 78619945 -174636638 - MER58 DNA MER1_type -1 2419 1 1427 170 69 24 chr2 78620691 78620980 -174635603 - AluJo SINE Alu 0 312 11 276 307 88 28 chr2 78621578 78621793 -174634790 - L2 LINE L2 -1 3271 3044 21 36 0 0 chr2 78621915 78621943 -174634640 + AT_rich Low_complexity Low_complexity 1 28 0 1994 138 50 73 chr2 78621981 78622365 -174634218 + THE1C LTR MaLR 1 375 0 1638 149 8 0 chr2 78622365 78622627 -174633956 + THE1C-int LTR MaLR 1 264 -1316 1000 150 95 11 chr2 78622629 78622803 -174633780 + THE1C LTR MaLR 208 375 0 1101 236 108 48 chr2 78623476 78623827 -174632756 - MLT1J2 LTR MaLR -78 372 1 540 307 145 21 chr2 78623828 78624111 -174632472 - L2 LINE L2 -9 3263 2946 346 349 120 31 chr2 78624169 78624589 -174631994 - L2 LINE L2 -443 2871 2401 2156 154 126 5 chr2 78624589 78624971 -174631612 - MSTA LTR MaLR 0 428 1 346 349 120 31 chr2 78624971 78625032 -174631551 - L2 LINE L2 -913 2401 2347 780 268 91 0 chr2 78625217 78625426 -174631157 - MLT1G LTR MaLR -38 552 325 590 242 13 19 chr2 78625415 78625572 -174631011 - MER20 DNA MER1_type -55 164 9 * 293 333 95 25 chr2 78625574 78625817 -174630766 - L2 LINE L2 -1021 2293 2034 491 245 27 34 chr2 78626461 78626608 -174629975 + MLT1K LTR MaLR 378 523 -65 21 0 0 0 chr2 78627902 78627923 -174628660 + AT_rich Low_complexity Low_complexity 1 21 0 26 30 0 0 chr2 78628035 78628068 -174628515 + AT_rich Low_complexity Low_complexity 1 33 0 305 209 99 0 chr2 78629264 78629355 -174627228 + L1MC4 LINE L1 7943 8042 0 1471 225 161 46 chr2 78629527 78629626 -174626957 + MLT1E LTR MaLR 2 88 -505 1339 197 4 25 chr2 78629626 78629870 -174626713 - MER8 DNA MER2_type 0 239 1 1471 225 161 46 chr2 78629870 78630290 -174626293 + MLT1E LTR MaLR 88 581 -12 668 90 0 10 chr2 78630540 78630640 -174625943 - L1PB2 LINE L1 -106 6045 5947 196 329 63 25 chr2 78630658 78630737 -174625846 - L2 LINE L2 -55 3217 3136 216 339 15 0 chr2 78630842 78630907 -174625676 + L3 LINE CR1 476 541 -1036 189 272 123 0 chr2 78631061 78631142 -174625441 - L3 LINE CR1 -771 806 716 1026 63 8 0 chr2 78631142 78631269 -174625314 + L1PB2 LINE L1 6022 6149 -2 5876 211 36 16 chr2 78631658 78633062 -174623521 + L1PA16 LINE L1 4120 5554 -612 1911 163 3 7 chr2 78633062 78633368 -174623215 + AluJb SINE Alu 1 305 -7 5876 211 36 16 chr2 78633368 78633990 -174622593 + L1PA16 LINE L1 5554 6162 -4 240 273 0 0 chr2 78634022 78634077 -174622506 + L1MC3 LINE L1 7700 7754 -31 248 65 0 0 chr2 78634684 78634715 -174621868 - Charlie2 DNA MER1_type -2557 225 195 190 250 77 0 chr2 78634715 78634767 -174621816 + MIR SINE MIR 65 120 -142 672 259 61 49 chr2 78635388 78635651 -174620932 + Charlie2 DNA MER1_type 53 318 -2544 1806 206 35 35 chr2 78635670 78636098 -174620485 + Charlie2 DNA MER1_type 1859 2286 -576 246 62 0 0 chr2 78636209 78636241 -174620342 + (TCCC)n Simple_repeat Simple_repeat 1 32 0 261 292 0 0 chr2 78638070 78638135 -174618448 + GA-rich Low_complexity Low_complexity 1 65 0 1133 170 13 13 chr2 78639167 78639391 -174617192 + L1MA4A LINE L1 5899 6122 -181 527 182 17 9 chr2 78639375 78639492 -174617091 + L1MA4A LINE L1 6044 6155 -1 * 21 0 0 0 chr2 78639507 78639528 -174617055 + AT_rich Low_complexity Low_complexity 1 21 0 2120 108 0 4 chr2 78639625 78639932 -174616651 + AluSg SINE Alu 2 307 0 2825 53 24 0 chr2 78640131 78640469 -174616114 + L1PA8 LINE L1 5825 6170 -2 225 278 0 0 chr2 78640979 78641033 -174615550 + (TATATG)n Simple_repeat Simple_repeat 1 54 0 1891 106 16 12 chr2 78641060 78641316 -174615267 + AluSg SINE Alu 36 292 -18 553 281 37 96 chr2 78641339 78641912 -174614671 - L1ME4a LINE L1 -82 6039 5501 8785 52 37 4 chr2 78643358 78644395 -174612188 + MER11C LTR ERVK 1 1071 0 495 184 0 19 chr2 78645665 78645768 -174610815 + L1ME3A LINE L1 6068 6168 -2 26 30 0 0 chr2 78645768 78645801 -174610782 + AT_rich Low_complexity Low_complexity 1 33 0 226 324 181 9 chr2 78645814 78645919 -174610664 - L2 LINE L2 -4 3268 3146 1443 266 117 24 chr2 78646144 78646358 -174610225 + L1MC4a LINE L1 5159 4879 -1267 1151 222 28 0 chr2 78646358 78646574 -174610009 + MER58A DNA MER1_type 3 224 0 1443 266 117 24 chr2 78646574 78647139 -174609444 + L1MC4a LINE L1 4878 5389 -757 600 280 56 23 chr2 78647231 78647445 -174609138 - L2 LINE L2 -4 3309 3089 265 167 0 0 chr2 78647520 78647568 -174609015 - L1MA3 LINE L1 0 6305 6258 995 205 78 10 chr2 78648204 78648409 -174608174 - MER20 DNA MER1_type 0 219 1 283 286 13 13 chr2 78648422 78648499 -174608084 + LTR67 LTR ERVL 97 173 -384 * 384 194 0 0 chr2 78648440 78648520 -174608063 + MLT1J2 LTR MaLR 72 253 -315 1552 218 45 8 chr2 78648650 78649027 -174607556 - L1MA9 LINE L1 -38 6274 5884 1319 161 9 4 chr2 78649025 78649255 -174607328 + L1MA9 LINE L1 5638 5868 -444 * 349 244 69 35 chr2 78649255 78649437 -174607146 + MLT1L LTR MaLR 391 609 -6 318 320 136 46 chr2 78649456 78649934 -174606649 - L2 LINE L2 -534 2780 2260 26 30 0 0 chr2 78649967 78650000 -174606583 + AT_rich Low_complexity Low_complexity 1 33 0 200 274 0 0 chr2 78650066 78650128 -174606455 + (CATATA)n Simple_repeat Simple_repeat 4 65 0 972 279 56 43 chr2 78650212 78650678 -174605905 - L1ME LINE L1 -385 5736 5265 197 32 0 32 chr2 78652828 78652859 -174603724 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 279 315 97 74 chr2 78655294 78655510 -174601073 + L2 LINE L2 2538 2758 -556 253 361 8 30 chr2 78655633 78655766 -174600817 + L2 LINE L2 2870 2999 -273 4587 170 46 22 chr2 78655798 78657350 -174599233 + L1MB3 LINE L1 4599 6182 -1 284 358 0 0 chr2 78659052 78659172 -174597411 + L2 LINE L2 702 821 -2493 379 288 59 25 chr2 78659194 78659312 -174597271 + L2 LINE L2 3149 3270 -2 2424 89 37 14 chr2 78659362 78659710 -174596873 + THE1C LTR MaLR 1 356 -19 309 169 0 0 chr2 78660380 78660439 -174596144 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 319 242 17 0 chr2 78660538 78660658 -174595925 + (TA)n Simple_repeat Simple_repeat 2 123 0 822 264 102 4 chr2 78661885 78662120 -174594463 - MIR SINE MIR -2 260 3 214 400 19 6 chr2 78662323 78662483 -174594100 - L2 LINE L2 -580 2734 2573 1935 225 94 50 chr2 78662487 78663268 -174593315 + L1MDa LINE L1 234 1339 -5201 9092 119 31 11 chr2 78663273 78664672 -174591911 + L1PBa LINE L1 59 1485 -5378 180 77 0 0 chr2 78664676 78664702 -174591881 + (CCCTAA)n Simple_repeat Simple_repeat 5 30 0 7564 217 5 7 chr2 78664702 78666696 -174589887 + L1MDa LINE L1 2841 4831 -1709 4556 102 14 45 chr2 78666700 78667372 -174589211 + L1PB1 LINE L1 5446 6095 -56 2588 64 0 3 chr2 78667372 78667683 -174588900 + AluY SINE Alu 1 310 -1 4556 102 14 45 chr2 78667683 78667738 -174588845 + L1PB1 LINE L1 6095 6150 -1 4983 173 57 62 chr2 78667950 78668355 -174588228 + L1MDa LINE L1 1327 1732 -4808 1996 161 0 19 chr2 78668355 78668671 -174587912 + AluJb SINE Alu 1 310 -2 4983 173 57 62 chr2 78668671 78669149 -174587434 + L1MDa LINE L1 1732 2205 -4335 1561 161 3 84 chr2 78669149 78669290 -174587293 + AluJo SINE Alu 1 104 -208 2143 36 0 8 chr2 78669290 78669568 -174587015 - AluY SINE Alu 0 314 39 1561 161 3 84 chr2 78669568 78669748 -174586835 + AluJo SINE Alu 104 297 -15 4983 173 57 62 chr2 78669748 78670155 -174586428 + L1MDa LINE L1 2205 2612 -3928 1794 210 27 0 chr2 78670135 78670544 -174586039 - L1PB3 LINE L1 -875 5271 4852 * 5520 107 35 29 chr2 78670544 78671446 -174585137 + L1PB3 LINE L1 5260 6300 -3 1611 146 16 0 chr2 78671595 78671849 -174584734 + AluJb SINE Alu 46 303 -9 327 165 58 83 chr2 78671892 78672013 -174584570 + L1MDa LINE L1 2660 2777 -3763 3343 243 33 40 chr2 78672015 78673079 -174583504 + L1MDa LINE L1 3600 4655 -1885 2200 178 71 0 chr2 78673099 78673481 -174583102 + MSTB LTR MaLR 18 426 0 2129 133 0 19 chr2 78673502 78673817 -174582766 + AluSx SINE Alu 1 309 -3 337 256 112 8 chr2 78673819 78673944 -174582639 + L1MDa LINE L1 4670 4807 -1733 237 175 113 38 chr2 78673981 78674028 -174582555 - L1MD2 LINE L1 -425 5934 5892 3060 169 13 2 chr2 78674028 78674577 -174582006 + L1MD1 LINE L1 5687 6241 -1 237 175 113 38 chr2 78674577 78674609 -174581974 - L1MD2 LINE L1 -467 5892 5849 192 294 110 44 chr2 78674692 78674828 -174581755 + L3 LINE CR1 1177 1321 -256 316 305 37 3 chr2 78674843 78674989 -174581594 + MIR SINE MIR 19 166 -62 325 284 11 0 chr2 78674993 78675088 -174581495 - LTR33A LTR ERVL -3 520 425 37 23 0 0 chr2 78675222 78675266 -174581317 + AT_rich Low_complexity Low_complexity 1 44 0 625 243 139 65 chr2 78675323 78675661 -174580922 - LTR33A LTR ERVL -127 396 34 194 203 17 51 chr2 78675716 78675775 -174580808 + MIR SINE MIR 206 262 0 2402 115 19 25 chr2 78677420 78677786 -174578797 + THE1B LTR MaLR 1 364 0 192 325 55 43 chr2 78678009 78678172 -174578411 + L2 LINE L2 2948 3112 -160 21 0 0 0 chr2 78679461 78679482 -174577101 + AT_rich Low_complexity Low_complexity 1 21 0 266 327 19 28 chr2 78681754 78681861 -174574722 + L2 LINE L2 3167 3272 0 1769 226 52 22 chr2 78682161 78682607 -174573976 + MLT1C LTR MaLR 1 459 -8 250 354 73 0 chr2 78682807 78682903 -174573680 + MIR SINE MIR 24 126 -136 208 177 32 32 chr2 78683208 78683270 -174573313 + L2 LINE L2 2606 2667 -647 1106 219 18 18 chr2 78683312 78683536 -174573047 + MER58A DNA MER1_type 1 224 0 1658 211 0 7 chr2 78683621 78683929 -174572654 - AluSx SINE Alu -6 306 1 231 314 86 0 chr2 78684351 78684456 -174572127 + L2 LINE L2 3154 3267 -5 234 0 0 0 chr2 78684478 78684504 -174572079 + (TA)n Simple_repeat Simple_repeat 2 27 0 2058 114 7 4 chr2 78686336 78686655 -174569928 + AluSg SINE Alu 1 320 0 217 299 146 24 chr2 78686656 78687067 -174569516 + L2 LINE L2 1676 2136 -1178 773 198 102 15 chr2 78687111 78687308 -174569275 + MIR SINE MIR 48 261 -1 1699 159 13 36 chr2 78687393 78687694 -174568889 + AluJo SINE Alu 1 294 -18 585 333 33 25 chr2 78687717 78688080 -174568503 + L2 LINE L2 2255 2620 -694 326 355 48 0 chr2 78688346 78688512 -174568071 + L2 LINE L2 2614 2787 -527 237 322 68 17 chr2 78688811 78688929 -174567654 - L2 LINE L2 -11 3261 3138 372 200 100 9 chr2 78688962 78689072 -174567511 + L2 LINE L2 3137 3256 -16 239 234 13 13 chr2 78690156 78690233 -174566350 + MIR SINE MIR 153 229 -33 239 170 0 0 chr2 78690488 78690535 -174566048 - L2 LINE L2 0 3272 3226 356 167 0 13 chr2 78690796 78690874 -174565709 + CT-rich Low_complexity Low_complexity 2 78 0 348 306 56 44 chr2 78691298 78691478 -174565105 + L2 LINE L2 2910 3091 -181 1668 131 25 0 chr2 78692151 78692387 -174564196 - MER1B DNA MER1_type 0 339 98 273 180 0 0 chr2 78693422 78693472 -174563111 - MIR SINE MIR -11 251 202 635 286 23 42 chr2 78693474 78693733 -174562850 + MIR SINE MIR 9 262 0 278 309 37 0 chr2 78693819 78693900 -174562683 - MIR SINE MIR -152 110 27 21 0 0 0 chr2 78693989 78694010 -174562573 + AT_rich Low_complexity Low_complexity 1 21 0 273 238 12 50 chr2 78694318 78694398 -174562185 - MER5A DNA MER1_type 0 189 113 895 170 25 106 chr2 78694597 78694832 -174561751 - MER20 DNA MER1_type -2 217 2 280 248 248 0 chr2 78694847 78694964 -174561619 - MIR SINE MIR -115 147 2 250 250 53 0 chr2 78695344 78695420 -174561163 + MIR SINE MIR 119 198 -64 412 250 135 16 chr2 78697494 78697654 -174558929 + MER5A DNA MER1_type 4 189 0 468 287 24 24 chr2 78697716 78697883 -174558700 - MER5B DNA MER1_type -11 167 1 305 218 59 0 chr2 78698039 78698140 -174558443 + MIR SINE MIR 38 144 -64 220 306 0 0 chr2 78698330 78698392 -174558191 + L2 LINE L2 3211 3272 0 198 346 39 15 chr2 78699001 78699131 -174557452 - MIR SINE MIR -14 248 116 223 163 0 0 chr2 78700363 78700406 -174556177 - MIR SINE MIR -106 156 114 441 256 88 44 chr2 78700669 78700829 -174555754 + MER5B DNA MER1_type 11 177 -1 303 122 0 0 chr2 78701459 78701508 -174555075 + (TC)n Simple_repeat Simple_repeat 1 49 0 25 51 0 0 chr2 78702642 78702681 -174553902 + AT_rich Low_complexity Low_complexity 1 39 0 210 176 84 35 chr2 78703769 78703911 -174552672 + (TTAA)n Simple_repeat Simple_repeat 1 149 0 47 0 0 17 chr2 78703948 78703963 -174552620 + AT_rich Low_complexity Low_complexity 1 15 -42 4328 111 25 29 chr2 78703963 78704645 -174551938 - L1PB2 LINE L1 -3 6148 5470 47 0 0 17 chr2 78704645 78704687 -174551896 + AT_rich Low_complexity Low_complexity 15 57 0 229 327 123 19 chr2 78704687 78705011 -174551572 + L2 LINE L2 1734 2091 -1223 401 315 95 30 chr2 78705045 78705374 -174551209 + L2 LINE L2 2736 3089 -183 408 270 149 6 chr2 78707346 78707520 -174549063 + MIR SINE MIR 46 244 -18 829 262 126 54 chr2 78707941 78708457 -174548126 + MLT1H1 LTR MaLR 3 555 0 349 323 47 21 chr2 78708529 78708721 -174547862 - MIR SINE MIR -15 247 51 2242 211 39 37 chr2 78708993 78709534 -174547049 - MLT1F LTR MaLR 0 542 1 453 291 107 43 chr2 78710627 78711133 -174545450 - HAL1 LINE L1 -739 1768 1231 238 198 302 24 chr2 78711502 78711628 -174544955 - MIR SINE MIR -2 260 100 2919 10 0 0 chr2 78711739 78712050 -174544533 - AluY SINE Alu 0 311 1 585 254 65 93 chr2 78712050 78712467 -174544116 + L1ME1 LINE L1 4581 4985 -1161 422 287 89 86 chr2 78712776 78713348 -174543235 + L1ME1 LINE L1 5369 5942 -224 2022 141 44 69 chr2 78713546 78713702 -174542881 + MLT1A1 LTR MaLR 1 159 -206 1345 146 73 15 chr2 78713702 78713976 -174542607 + L1MA5 LINE L1 6009 6298 -2 2022 141 44 69 chr2 78713976 78714182 -174542401 + MLT1A1 LTR MaLR 159 354 -11 23 54 0 0 chr2 78714202 78714239 -174542344 + AT_rich Low_complexity Low_complexity 1 37 0 16412 155 22 12 chr2 78714241 78716523 -174540060 + L1MA3 LINE L1 13 2269 -5455 2392 89 7 3 chr2 78716523 78716827 -174539756 + AluSc SINE Alu 1 305 -4 16412 155 22 12 chr2 78716827 78722162 -174534421 + L1MA3 LINE L1 2269 7724 0 620 189 34 2 chr2 78723325 78723469 -174533114 - MER106B DNA MER1_type -18 218 62 205 347 29 80 chr2 78723474 78723823 -174532760 + L3 LINE CR1 934 1264 -313 227 286 123 7 chr2 78723834 78723988 -174532595 + HAL1b LINE L1 477 648 -700 825 164 13 13 chr2 78723989 78724148 -174532435 + L1MD3 LINE L1 7731 7889 -106 421 249 162 11 chr2 78724282 78724467 -174532116 + L1ME4a LINE L1 5684 5896 -225 1761 83 44 0 chr2 78724500 78724728 -174531855 + AluSc SINE Alu 60 297 -12 298 200 0 18 chr2 78726013 78726123 -174530460 + (TA)n Simple_repeat Simple_repeat 1 108 0 3985 56 13 0 chr2 78726124 78726591 -174529992 - L1PA7 LINE L1 -16 6138 5666 326 213 107 49 chr2 78728958 78729080 -174527503 + L1 LINE L1 5172 5300 -846 626 259 0 7 chr2 78729087 78729230 -174527353 + MLT1A2 LTR MaLR 187 328 -46 214 167 0 0 chr2 78729230 78729266 -174527317 + GA-rich Low_complexity Low_complexity 6 41 0 648 310 142 4 chr2 78729320 78729829 -174526754 + L1MC4a LINE L1 5373 5951 -1857 1592 246 32 25 chr2 78730826 78731229 -174525354 - MLT1I LTR MaLR -3 406 1 222 266 16 16 chr2 78731473 78731537 -174525046 - MER5B DNA MER1_type 0 178 115 219 337 12 36 chr2 78731579 78731662 -174524921 - MER5A DNA MER1_type -50 139 59 1707 236 93 102 chr2 78731687 78732399 -174524184 + MER21B LTR ERV1 20 724 -139 557 227 7 57 chr2 78732656 78732693 -174523890 - MLT1G1 LTR MaLR 0 595 558 2464 62 7 0 chr2 78732693 78733001 -174523582 + AluY SINE Alu 1 310 -1 557 227 7 57 chr2 78733001 78733104 -174523479 - MLT1G1 LTR MaLR -37 558 462 417 265 90 74 chr2 78733117 78733472 -174523111 - MLT1G1 LTR MaLR -182 366 15 288 326 21 0 chr2 78734097 78734192 -174522391 + MIR3 SINE MIR 112 208 0 611 305 23 70 chr2 78734541 78734678 -174521905 + MIR SINE MIR 16 158 -104 1993 125 21 0 chr2 78734678 78734965 -174521618 + AluSx SINE Alu 1 293 -19 2116 133 0 0 chr2 78734966 78735288 -174521295 + AluSx SINE Alu 1 322 0 611 305 23 70 chr2 78735288 78735406 -174521177 + MIR SINE MIR 157 262 0 184 330 128 0 chr2 78735717 78735811 -174520772 - L2 LINE L2 -19 3253 3148 182 286 80 36 chr2 78736534 78736646 -174519937 + L2 LINE L2 2222 2338 -976 1509 207 60 71 chr2 78736661 78737125 -174519458 + MLT1C LTR MaLR 1 459 -8 258 352 84 35 chr2 78737618 78737845 -174518738 + L2 LINE L2 2836 3073 -199 296 221 132 66 chr2 78738003 78738139 -174518444 - L2 LINE L2 0 3313 3169 22 0 0 0 chr2 78738481 78738503 -174518080 + AT_rich Low_complexity Low_complexity 1 22 0 387 0 0 0 chr2 78738811 78738854 -174517729 + (TG)n Simple_repeat Simple_repeat 2 44 0 569 275 25 0 chr2 78738857 78738977 -174517606 - FLAM_A SINE Alu -19 123 1 467 316 150 35 chr2 78738995 78740026 -174516557 - L1MC4a LINE L1 -777 5369 4682 2975 159 20 4 chr2 78740676 78741136 -174515447 + MLT1C LTR MaLR 1 467 0 299 256 24 12 chr2 78741571 78741653 -174514930 + L2 LINE L2 3231 3313 0 191 59 0 59 chr2 78742113 78742147 -174514436 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 188 291 18 0 chr2 78742837 78742892 -174513691 - L2 LINE L2 -8 3264 3209 727 266 59 5 chr2 78743593 78743796 -174512787 + MIR SINE MIR 20 233 -29 1268 203 59 4 chr2 78746143 78746399 -174510184 - AluJo SINE Alu -30 282 13 225 337 0 27 chr2 78746712 78746896 -174509687 + C-rich Low_complexity Low_complexity 2 180 0 * 380 146 38 90 chr2 78746764 78747307 -174509276 + (CACCAT)n Simple_repeat Simple_repeat 1 514 0 186 280 20 0 chr2 78748160 78748210 -174508373 - L2 LINE L2 -3 3269 3219 1296 248 117 35 chr2 78748210 78748690 -174507893 - LTR33A LTR ERVL 0 523 5 180 0 0 0 chr2 78748842 78748862 -174507721 + (G)n Simple_repeat Simple_repeat 1 20 0 270 231 29 96 chr2 78748871 78748975 -174507608 - L2 LINE L2 -225 3047 2951 325 306 94 63 chr2 78749202 78749457 -174507126 + L2 LINE L2 2991 3253 -19 405 290 22 22 chr2 78750025 78750163 -174506420 + L1ME4a LINE L1 5740 5877 -244 1734 173 10 10 chr2 78750177 78750472 -174506111 - AluJb SINE Alu -17 295 1 21 36 0 0 chr2 78750591 78750619 -174505964 + AT_rich Low_complexity Low_complexity 1 28 0 277 301 84 14 chr2 78750944 78751087 -174505496 + MIR SINE MIR 82 234 -28 1283 167 139 12 chr2 78751271 78751529 -174505054 + AluJo SINE Alu 1 291 -21 562 324 84 13 chr2 78751816 78752041 -174504542 - MIR SINE MIR 0 262 22 226 167 0 17 chr2 78752185 78752245 -174504338 + L1MCa LINE L1 2006 2064 -4362 241 193 0 84 chr2 78752253 78752336 -174504247 + L1MCa LINE L1 2006 2081 -4345 1285 214 115 54 chr2 78752503 78752876 -174503707 - MSTD LTR MaLR 0 396 1 284 176 0 0 chr2 78753252 78753303 -174503280 - L2 LINE L2 0 3313 3263 1951 160 56 3 chr2 78754069 78754406 -174502177 - MER46B DNA MER2_type -1 235 6 1331 218 114 19 chr2 78754547 78754609 -174501974 + MER58B DNA MER1_type 5 60 -2360 2450 192 38 65 chr2 78754609 78755093 -174501490 + MER74A LTR ERVL 1 469 -89 2072 154 3 0 chr2 78755093 78755404 -174501179 - AluSx SINE Alu 0 312 1 2450 192 38 65 chr2 78755404 78755492 -174501091 + MER74A LTR ERVL 469 558 0 1331 218 114 19 chr2 78755492 78755737 -174500846 + MER58B DNA MER1_type 60 341 0 544 224 115 5 chr2 78755916 78756108 -174500475 + MER112 DNA MER1_type 17 229 -31 228 310 0 0 chr2 78756450 78756508 -174500075 + L2 LINE L2 3203 3260 -12 857 203 34 23 chr2 78757454 78757631 -174498952 + MER97b DNA MER1_type? 1 179 -874 248 294 17 17 chr2 78757814 78757933 -174498650 + L2 LINE L2 1984 2102 -1212 505 268 85 17 chr2 78759267 78759631 -174496952 + L1ME LINE L1 5086 5479 -642 1098 174 70 16 chr2 78759670 78759912 -174496671 - L1MA4 LINE L1 -11 6289 6035 2001 114 3 28 chr2 78760022 78760332 -174496251 - AluSx SINE Alu 0 303 1 254 332 47 35 chr2 78760856 78761088 -174495495 - L2 LINE L2 -951 2363 2129 425 152 0 7 chr2 78761614 78761858 -174494725 + AluJb SINE Alu 2 304 -8 293 179 71 48 chr2 78762374 78762458 -174494125 + L2 LINE L2 2238 2323 -991 22 0 0 0 chr2 78762780 78762802 -174493781 + AT_rich Low_complexity Low_complexity 1 22 0 823 165 0 0 chr2 78762812 78762933 -174493650 - FLAM_C SINE Alu -21 122 2 632 134 35 6 chr2 78762990 78763162 -174493421 + (TA)n Simple_repeat Simple_repeat 2 178 0 310 252 0 63 chr2 78763164 78763275 -174493308 + L1MC4 LINE L1 6597 6700 -1342 245 182 68 0 chr2 78763275 78763363 -174493220 + (TA)n Simple_repeat Simple_repeat 2 95 0 599 239 54 49 chr2 78763452 78763657 -174492926 + U3 snRNA snRNA 6 211 -6 514 285 97 74 chr2 78764055 78764565 -174492018 - L1ME LINE L1 -334 5787 5258 2390 92 0 22 chr2 78764929 78765244 -174491339 - AluSx SINE Alu 0 312 5 1780 180 3 0 chr2 78765252 78765547 -174491036 - AluJo SINE Alu -16 296 1 1718 162 0 0 chr2 78766003 78766269 -174490314 + AluSx SINE Alu 5 270 -42 333 92 40 0 chr2 78766270 78766331 -174490252 + AluSc SINE Alu 240 293 -6 392 304 98 27 chr2 78766409 78766705 -174489878 - L2 LINE L2 -669 2645 2329 437 287 27 48 chr2 78767862 78768050 -174488533 + MER5A DNA MER1_type 1 184 -5 298 91 36 0 chr2 78768140 78768195 -174488388 + T-rich Low_complexity Low_complexity 4 60 0 240 284 101 61 chr2 78768325 78768473 -174488110 + MIR SINE MIR 20 173 -89 1978 146 0 13 chr2 78768748 78769050 -174487533 - AluJo SINE Alu -10 302 5 231 242 0 0 chr2 78769238 78769300 -174487283 + U3 snRNA snRNA 3 64 -153 1907 145 10 0 chr2 78770012 78770302 -174486281 + AluSx SINE Alu 1 293 -19 1982 188 41 2 chr2 78770931 78771345 -174485238 + LTR40c LTR ERVL 24 453 -12 1985 117 71 71 chr2 78772207 78772276 -174484307 - Tigger2a DNA MER2_type -2274 434 366 2395 93 3 6 chr2 78772276 78772588 -174483995 + AluSp SINE Alu 1 311 -2 1985 117 71 71 chr2 78772588 78772928 -174483655 - Tigger2a DNA MER2_type -2341 367 25 331 316 155 35 chr2 78772952 78773786 -174482797 + L2 LINE L2 1916 2849 -465 182 387 11 11 chr2 78774312 78774405 -174482178 + L2 LINE L2 3006 3098 -174 233 236 66 9 chr2 78774553 78774654 -174481929 + MIR SINE MIR 81 193 -69 1409 187 0 7 chr2 78774806 78775095 -174481488 + L1MA4 LINE L1 4939 5225 -921 5289 143 25 21 chr2 78775096 78776091 -174480492 + L1MA4 LINE L1 5274 6272 -28 1394 213 97 3 chr2 78777084 78777413 -174479170 - MLT1F1 LTR MaLR -2 565 206 2295 87 7 13 chr2 78777459 78777768 -174478815 - AluSg SINE Alu -3 307 1 3554 210 11 5 chr2 78777903 78778761 -174477822 - L1 LINE L1 -1052 5094 4232 791 126 0 7 chr2 78778868 78779003 -174477580 + L1MA9 LINE L1 6179 6312 0 301 306 75 6 chr2 78779010 78779170 -174477413 - MIR SINE MIR -26 236 66 235 256 23 159 chr2 78779138 78779253 -174477330 + L2 LINE L2 2478 2562 -752 * 876 245 5 5 chr2 78779253 78779441 -174477142 - MER5A DNA MER1_type 0 189 2 235 256 23 159 chr2 78779441 78779501 -174477082 + L2 LINE L2 2562 2629 -685 224 324 149 0 chr2 78779556 78779630 -174476953 - L2 LINE L2 -15 3298 3214 550 312 76 46 chr2 78780571 78780965 -174475618 - L2 LINE L2 -624 2690 2285 2118 91 46 26 chr2 78781026 78781333 -174475250 - AluSq SINE Alu 0 313 1 700 165 16 16 chr2 78781338 78781465 -174475118 - FLAM_C SINE Alu -6 127 1 1038 154 11 6 chr2 78781656 78781831 -174474752 + AluJo SINE Alu 119 294 -18 215 342 138 36 chr2 78781846 78782150 -174474433 - L2 LINE L2 -42 3230 2896 933 131 49 27 chr2 78783369 78783552 -174473031 - AluJo SINE Alu -4 308 122 291 302 107 13 chr2 78783813 78784068 -174472515 + L1ME3A LINE L1 5661 5939 -231 2178 100 0 35 chr2 78784072 78784383 -174472200 + AluSg SINE Alu 1 300 -10 743 278 116 44 chr2 78784461 78784817 -174471766 + L1MC4 LINE L1 7357 7686 -356 1038 128 179 5 chr2 78784817 78785013 -174471570 - MER30 DNA MER1_type 0 230 1 743 278 116 44 chr2 78785013 78785146 -174471437 + L1MC4 LINE L1 7686 7808 -234 1464 157 50 18 chr2 78785146 78785426 -174471157 - AluJo SINE Alu -23 289 1 743 278 116 44 chr2 78785426 78785575 -174471008 + L1MC4 LINE L1 7808 8042 0 435 296 92 58 chr2 78787237 78787477 -174469106 + MIR SINE MIR 12 259 -3 766 295 179 12 chr2 78789089 78789503 -174467080 + L2 LINE L2 2156 2638 -676 901 206 31 0 chr2 78789513 78789707 -174466876 - MLT1A1 LTR MaLR 0 365 166 189 0 0 0 chr2 78790525 78790546 -174466037 + (T)n Simple_repeat Simple_repeat 1 21 0 1081 242 253 30 chr2 78791923 78792758 -174463825 - HAL1 LINE L1 -718 1789 769 286 182 0 0 chr2 78792810 78792865 -174463718 - HAL1 LINE L1 -1821 686 632 758 200 39 15 chr2 78793362 78793567 -174463016 - L1MB4 LINE L1 0 6180 5971 1261 185 66 4 chr2 78793572 78793799 -174462784 - AluJo SINE Alu -15 297 57 1097 162 34 8 chr2 78793800 78794035 -174462548 - L1MB4 LINE L1 -322 5858 5618 821 244 84 0 chr2 78794045 78794344 -174462239 - L1M4 LINE L1 -3228 3416 3093 5359 205 118 24 chr2 78794352 78796375 -174460208 - L1M4 LINE L1 -3840 2804 611 327 262 92 49 chr2 78796632 78796796 -174459787 - L1M4 LINE L1 -6281 261 91 723 186 0 8 chr2 78796832 78796956 -174459627 - FLAM_C SINE Alu -10 123 1 477 153 0 0 chr2 78797218 78797290 -174459293 - AluJ/FLAM SINE Alu -213 99 28 1230 200 137 49 chr2 78797295 78797806 -174458777 - L1M4 LINE L1 -1935 4211 3656 1980 155 0 19 chr2 78799071 78799388 -174457195 + AluJb SINE Alu 1 311 -1 237 287 69 0 chr2 78799595 78799696 -174456887 + L1ME LINE L1 5477 5584 -537 1854 149 3 23 chr2 78800646 78800948 -174455635 - AluJo SINE Alu -16 296 1 23 33 0 0 chr2 78802192 78802222 -174454361 + AT_rich Low_complexity Low_complexity 1 30 0 377 264 103 52 chr2 78802289 78802789 -174453794 - PABL_B LTR ERV1 0 667 1 22 0 0 0 chr2 78803362 78803384 -174453199 + AT_rich Low_complexity Low_complexity 1 22 0 936 255 36 49 chr2 78803521 78803830 -174452753 + PABL_B LTR ERV1 58 514 -153 309 26 0 0 chr2 78803830 78803868 -174452715 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 936 255 36 49 chr2 78803868 78804021 -174452562 + PABL_B LTR ERV1 514 667 0 25 0 0 0 chr2 78804037 78804062 -174452521 + AT_rich Low_complexity Low_complexity 1 25 0 243 0 0 0 chr2 78804098 78804126 -174452457 - MER4B LTR ERV1 0 610 583 358 279 125 14 chr2 78804184 78804392 -174452191 - L1ME LINE L1 -371 5750 5520 375 253 35 52 chr2 78804549 78804723 -174451860 - L1ME LINE L1 -2383 5425 5255 271 163 35 47 chr2 78804789 78804875 -174451708 - L1MC5 LINE L1 -50 7911 7827 352 275 106 28 chr2 78805010 78805152 -174451431 - L1ME LINE L1 -1112 5034 4882 2095 115 28 0 chr2 78805233 78805519 -174451064 - AluSq SINE Alu -19 294 1 213 353 29 0 chr2 78806368 78806470 -174450113 + L2 LINE L2 2882 2986 -286 858 316 92 24 chr2 78806488 78806991 -174449592 + L2 LINE L2 1866 2402 -912 1279 205 69 16 chr2 78807060 78807377 -174449206 + MER58B DNA MER1_type 1 334 -7 41 0 0 0 chr2 78807639 78807680 -174448903 + AT_rich Low_complexity Low_complexity 1 41 0 500 168 23 0 chr2 78807680 78807853 -174448730 + (TA)n Simple_repeat Simple_repeat 2 178 0 383 275 92 0 chr2 78808187 78808307 -174448276 - MIR SINE MIR -22 240 110 2583 45 7 0 chr2 78808523 78808832 -174447751 + AluY SINE Alu 1 311 0 1076 283 54 38 chr2 78809162 78809767 -174446816 - L1ME3A LINE L1 -314 5856 5242 28 91 0 0 chr2 78810067 78810144 -174446439 + AT_rich Low_complexity Low_complexity 1 77 0 235 211 0 0 chr2 78810618 78810675 -174445908 + L1MC4 LINE L1 7688 7744 -298 287 237 25 17 chr2 78810810 78810928 -174445655 + L1MC4 LINE L1 7922 8040 -2 2180 132 6 3 chr2 78810955 78811266 -174445317 + AluSx SINE Alu 1 312 0 854 352 173 18 chr2 78811682 78812540 -174444043 - L3 LINE CR1 -44 1533 543 1019 179 47 19 chr2 78812899 78813111 -174443472 + MER20 DNA MER1_type 2 219 0 2208 84 0 0 chr2 78813211 78813486 -174443097 + AluY SINE Alu 21 295 -16 363 279 100 7 chr2 78813540 78813680 -174442903 + MIR SINE MIR 61 213 -49 322 299 222 0 chr2 78813758 78813902 -174442681 - L3 LINE CR1 -221 1356 1181 182 245 38 38 chr2 78814066 78814116 -174442467 + L2 LINE L2 361 410 -2904 290 286 149 20 chr2 78814116 78814246 -174442337 + MIR SINE MIR 3 146 -62 985 171 237 4 chr2 78814261 78814489 -174442094 - AluJo SINE Alu -30 282 2 209 226 131 24 chr2 78814506 78814590 -174441993 + MIR SINE MIR 166 258 -4 222 279 25 13 chr2 78814779 78814858 -174441725 - L3 LINE CR1 -399 1178 1099 1566 280 78 79 chr2 78815897 78816615 -174439968 + L2 LINE L2 1001 1717 -1597 14463 111 6 27 chr2 78816623 78820062 -174436521 + L1P3 LINE L1 1 3392 -3069 4884 64 8 11 chr2 78820062 78820712 -174435871 + L1PA7 LINE L1 5502 6151 -3 2611 266 56 27 chr2 78820712 78821539 -174435044 + L2 LINE L2 1704 2554 -760 759 134 0 89 chr2 78821738 78821895 -174434688 - FLAM_C SINE Alu 0 143 1 1763 172 7 10 chr2 78821955 78822258 -174434325 + AluJo SINE Alu 1 302 -10 2239 115 0 3 chr2 78822432 78822728 -174433855 - AluSq SINE Alu -16 297 3 633 286 122 12 chr2 78822883 78823138 -174433445 - L2 LINE L2 -1131 2183 1901 29 0 0 0 chr2 78824828 78824857 -174431726 + AT_rich Low_complexity Low_complexity 1 29 0 209 331 74 34 chr2 78824874 78825049 -174431534 - MIR SINE MIR 0 262 81 1628 148 97 6 chr2 78826568 78826879 -174429704 - MER44D DNA MER2_type 0 609 1 26 0 0 0 chr2 78827388 78827414 -174429169 + AT_rich Low_complexity Low_complexity 1 26 0 225 0 0 0 chr2 78827641 78827666 -174428917 + (TA)n Simple_repeat Simple_repeat 1 25 0 2078 130 20 3 chr2 78827864 78828163 -174428420 + AluSx SINE Alu 1 304 -8 2046 134 0 28 chr2 78828651 78828972 -174427611 + AluSx SINE Alu 1 312 0 378 282 46 37 chr2 78829385 78829601 -174426982 + L1MC4a LINE L1 5548 5765 -356 25 31 0 0 chr2 78829923 78829955 -174426628 + AT_rich Low_complexity Low_complexity 1 32 0 227 208 91 0 chr2 78830280 78830357 -174426226 + L1MC4a LINE L1 5874 5957 -1851 25 0 0 0 chr2 78830527 78830552 -174426031 + AT_rich Low_complexity Low_complexity 1 25 0 941 211 87 19 chr2 78830640 78830848 -174425735 + MER58A DNA MER1_type 3 224 0 647 163 89 0 chr2 78831051 78831186 -174425397 - Tigger7 DNA MER2_type -2 2585 2439 * 1885 191 0 6 chr2 78831181 78831527 -174425056 - Tigger7 DNA MER2_type -2143 344 1 214 259 37 0 chr2 78831883 78831937 -174424646 + MIR3 SINE MIR 152 207 -1 2295 97 0 3 chr2 78832281 78832580 -174424003 - AluY SINE Alu -13 298 1 847 238 201 19 chr2 78833167 78833541 -174423042 + MLT1D LTR MaLR 64 505 0 229 238 73 48 chr2 78833862 78834068 -174422515 + L1ME LINE L1 5693 5903 -218 2335 173 96 28 chr2 78834075 78834224 -174422359 + MER119 DNA MER1_type 3 140 -443 2051 156 3 3 chr2 78834224 78834526 -174422057 + AluSx SINE Alu 1 302 -10 2335 173 96 28 chr2 78834526 78834920 -174421663 + MER119 DNA MER1_type 140 583 0 210 71 0 0 chr2 78835057 78835085 -174421498 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 1699 175 4 4 chr2 78835091 78835371 -174421212 - AluJo SINE Alu -32 280 1 1586 154 15 11 chr2 78835391 78835651 -174420932 - AluJb SINE Alu -11 301 41 1024 223 181 54 chr2 78836215 78836663 -174419920 + MLT1D LTR MaLR 1 505 0 533 320 146 0 chr2 78836840 78837059 -174419524 - MIR SINE MIR -6 256 6 311 333 142 16 chr2 78838835 78839081 -174417502 + L3 LINE CR1 118 394 -1183 540 285 82 6 chr2 78839178 78839336 -174417247 - MER5B DNA MER1_type -1 177 8 198 342 69 40 chr2 78839341 78839543 -174417040 + L3 LINE CR1 831 1038 -539 187 394 40 10 chr2 78839528 78839627 -174416956 + L2 LINE L2 3169 3270 -2 * 262 250 174 8 chr2 78839812 78839944 -174416639 - L3 LINE CR1 -274 1303 1150 242 249 67 88 chr2 78839959 78840152 -174416431 - MER20B DNA MER1_type -594 189 1 1795 154 63 0 chr2 78840176 78840461 -174416122 - AluSx SINE Alu -9 303 1 765 204 124 11 chr2 78840483 78840669 -174415914 - MER3 DNA MER1_type -2 207 1 674 178 93 84 chr2 78840791 78840836 -174415747 + Charlie4a DNA MER1_type 282 325 -1636 2419 77 20 0 chr2 78840836 78841135 -174415448 + AluY SINE Alu 1 305 -6 674 178 93 84 chr2 78841135 78841314 -174415269 + Charlie4a DNA MER1_type 325 508 0 * 884 202 17 0 chr2 78841314 78841483 -174415100 - MER58A DNA MER1_type -23 201 30 196 319 72 0 chr2 78841493 78841562 -174415021 + L2 LINE L2 2684 2757 -557 434 214 61 31 chr2 78841764 78841862 -174414721 + MIR SINE MIR 2 102 -160 279 270 204 47 chr2 78842483 78842694 -174413889 - MIR SINE MIR -16 246 3 185 328 0 0 chr2 78842807 78842868 -174413715 + MIR SINE MIR 131 191 -71 4443 204 124 20 chr2 78843146 78843996 -174412587 + Charlie1a DNA MER1_type 1 1038 -1723 2433 94 3 0 chr2 78843996 78844303 -174412280 - AluSg SINE Alu -2 308 1 4443 204 124 20 chr2 78844303 78844769 -174411814 + Charlie1a DNA MER1_type 1038 1454 -1 1933 136 68 27 chr2 78844906 78845319 -174411264 + L1MA8 LINE L1 5851 6280 -11 316 288 121 86 chr2 78846020 78846506 -174410077 + L1M2 LINE L1 449 951 -5898 505 174 0 0 chr2 78847013 78847099 -174409484 - MER63 DNA MER1_type -229 831 746 4170 118 43 74 chr2 78847109 78848046 -174408537 + pTR5 LTR ERV1 955 2021 -417 310 221 0 0 chr2 78848050 78848127 -174408456 + LTR30 LTR ERV1 544 620 -102 1266 130 4 130 chr2 78848127 78848358 -174408225 + LTR12 LTR ERV1 355 689 -25 431 272 103 0 chr2 78848358 78848494 -174408089 - MER63 DNA MER1_type -286 776 1 687 212 62 0 chr2 78849062 78849208 -174407375 - AluJb SINE Alu -24 288 134 207 254 55 18 chr2 78849321 78849376 -174407207 - L2 LINE L2 -8 3305 3249 337 278 11 0 chr2 78849438 78849528 -174407055 - MER5A DNA MER1_type -85 104 14 2357 85 3 0 chr2 78849577 78849872 -174406711 + AluSg SINE Alu 1 296 -14 414 187 0 56 chr2 78850778 78850885 -174405698 - MER53 DNA DNA -2 187 87 2376 91 3 0 chr2 78851120 78851428 -174405155 - AluSq SINE Alu -4 309 1 21 0 0 0 chr2 78852253 78852274 -174404309 + AT_rich Low_complexity Low_complexity 1 21 0 844 178 24 6 chr2 78852585 78852754 -174403829 - MER110 LTR ERV1 -6 485 314 2519 40 23 0 chr2 78852754 78853056 -174403527 - AluYb8 SINE Alu -9 309 1 2200 183 5 0 chr2 78853083 78853503 -174403080 - L1MB1 LINE L1 -1 6167 5746 1066 161 0 5 chr2 78853503 78853682 -174402901 + L1MB1 LINE L1 5551 5730 -438 1280 252 57 62 chr2 78854038 78854506 -174402077 - L1ME3A LINE L1 -9 6153 5738 2261 102 7 3 chr2 78854506 78854801 -174401782 - AluSx SINE Alu -16 296 1 1280 252 57 62 chr2 78854801 78855156 -174401427 - L1ME3A LINE L1 -424 5738 5383 322 200 0 20 chr2 78855156 78855256 -174401327 + (TA)n Simple_repeat Simple_repeat 1 98 0 515 267 52 40 chr2 78855257 78855583 -174401000 - L1ME3A LINE L1 -763 5383 5054 2007 224 61 77 chr2 78855692 78856480 -174400103 - L1MC5 LINE L1 -42 7919 7151 1208 191 119 32 chr2 78856480 78856758 -174399825 - AluJo SINE Alu 0 302 1 2007 224 61 77 chr2 78856758 78857030 -174399553 - L1MC5 LINE L1 -810 7151 6876 831 341 24 34 chr2 78857287 78857786 -174398797 + MER110-int LTR ERV1 2331 2824 -1823 805 272 5 8 chr2 78858745 78859026 -174397557 - L1P3 LINE L1 -5591 284 4 1784 118 93 0 chr2 78859083 78859353 -174397230 - AluSg SINE Alu -13 297 3 3505 111 4 0 chr2 78859355 78859871 -174396712 + L1PA10 LINE L1 5650 6167 -1 9639 40 120 10 chr2 78860054 78861300 -174395283 + SVA Other Other 1 1384 -2 2360 125 82 12 chr2 78861770 78862170 -174394413 - MSTA LTR MaLR 0 428 1 502 243 281 5 chr2 78862264 78862449 -174394134 + MER90 LTR ERV1 378 613 -1 354 218 0 0 chr2 78862449 78862527 -174394056 - MER116 DNA Mariner -2 78 1 2037 172 0 0 chr2 78862603 78862963 -174393620 + MER46B DNA MER2_type 1 235 -1 1727 166 21 0 chr2 78863293 78863619 -174392964 + L1MB7 LINE L1 5852 6184 0 332 247 37 0 chr2 78863649 78863730 -174392853 - MIR SINE MIR -64 198 115 453 148 74 0 chr2 78864361 78864442 -174392141 + MER63 DNA MER1_type 1 713 -349 1839 164 95 54 chr2 78864929 78865338 -174391245 + MSTB LTR MaLR 1 426 0 491 266 74 33 chr2 78867305 78867541 -174389042 - L2 LINE L2 -276 2996 2753 473 314 63 28 chr2 78867847 78868227 -174388356 - L1MC/D LINE L1 -2158 6044 5658 2664 86 3 0 chr2 78868320 78868671 -174387912 - THE1A LTR MaLR -1 354 3 10512 92 79 0 chr2 78868673 78870137 -174386446 - THE1A-int LTR MaLR 0 1580 1 1048 107 0 0 chr2 78870138 78870288 -174386295 - THE1A LTR MaLR -1 354 205 621 85 0 0 chr2 78870285 78870367 -174386216 - THE1A LTR MaLR -273 82 1 * 373 232 90 52 chr2 78870367 78870634 -174385949 - L1MC/D LINE L1 -980 5560 5284 390 277 66 0 chr2 78870781 78870947 -174385636 - L1MC/D LINE L1 -1325 5215 5039 399 238 38 43 chr2 78870951 78871136 -174385447 - L1MC/D LINE L1 -2396 4144 3961 1130 246 90 14 chr2 78871166 78871520 -174385063 + MER21B LTR ERV1 432 812 -51 352 242 68 0 chr2 78871700 78871832 -174384751 - HAL1 LINE L1 -105 2402 2262 438 208 10 0 chr2 78871834 78871930 -174384653 - MIR SINE MIR 0 262 166 823 249 132 39 chr2 78871930 78872287 -174384296 - HAL1 LINE L1 -2117 390 1 341 219 25 76 chr2 78872372 78872491 -174384092 - L1MC/D LINE L1 -3971 2569 2457 219 250 11 11 chr2 78872731 78872823 -174383760 + (TTTA)n Simple_repeat Simple_repeat 4 95 0 205 225 36 22 chr2 78872759 78872897 -174383686 + (TTAA)n Simple_repeat Simple_repeat 4 143 0 * 562 294 41 20 chr2 78873127 78873324 -174383259 - MER63A DNA MER1_type -9 201 1 362 259 12 12 chr2 78873325 78873406 -174383177 - L2 LINE L2 -21 3292 3212 6261 239 45 15 chr2 78873407 78874721 -174381862 + L1M2c LINE L1 2 1367 -5422 1630 208 44 136 chr2 78874721 78875331 -174381252 + MLT2B3 LTR ERVL 1 554 0 6261 239 45 15 chr2 78875331 78875515 -174381068 + L1M2c LINE L1 1367 1544 -5245 227 75 25 0 chr2 78875578 78875610 -174380973 + L1MA5A LINE L1 1559 1594 -5195 2129 125 76 17 chr2 78875610 78875954 -174380629 - THE1B LTR MaLR 0 364 1 2249 87 0 0 chr2 78875954 78876263 -174380320 - THE1B-int LTR MaLR 0 1580 1272 636 130 81 49 chr2 78876263 78876386 -174380197 - THE1B LTR MaLR -105 259 133 620 49 24 0 chr2 78876386 78876468 -174380115 - THE1B-int LTR MaLR -314 1266 1183 * 12948 173 26 17 chr2 78876464 78876555 -174380028 + L1MA5A LINE L1 2965 3054 -3885 1974 130 7 0 chr2 78876555 78876876 -174379707 + AluSc SINE Alu 1 323 0 12948 173 26 17 chr2 78876876 78880719 -174375864 + L1MA5A LINE L1 3054 6934 -5 928 283 44 82 chr2 78880719 78881311 -174375272 - L2 LINE L2 -77 3236 2660 2185 120 3 7 chr2 78881312 78881621 -174374962 + AluSx SINE Alu 5 312 0 668 298 105 35 chr2 78881633 78882063 -174374520 + MLT1H1 LTR MaLR 89 548 -7 478 313 28 0 chr2 78882066 78882210 -174374373 - L2 LINE L2 -1078 2236 2089 1849 157 0 26 chr2 78882338 78882650 -174373933 - AluSx SINE Alu -8 304 1 260 287 61 55 chr2 78882678 78882842 -174373741 - HAL1 LINE L1 -1045 1462 1298 401 279 43 43 chr2 78883048 78883209 -174373374 - L1MEd LINE L1 -5102 1017 857 298 285 66 29 chr2 78884380 78884517 -174372066 + L1ME LINE L1 5615 5756 -365 211 175 18 18 chr2 78885740 78885797 -174370786 + (TA)n Simple_repeat Simple_repeat 2 58 0 1221 268 19 3 chr2 78885805 78886130 -174370453 - L1ME1 LINE L1 -5 6161 5832 1583 201 14 30 chr2 78886243 78886607 -174369976 + MLT1A2 LTR MaLR 4 361 -13 821 205 48 0 chr2 78886742 78886908 -174369675 + MER5A DNA MER1_type 1 174 -15 22 35 0 0 chr2 78887322 78887351 -174369232 + AT_rich Low_complexity Low_complexity 1 29 0 227 299 15 0 chr2 78889542 78889609 -174366974 + CT-rich Low_complexity Low_complexity 4 71 0 29 47 0 0 chr2 78889682 78889725 -174366858 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr2 78889804 78889825 -174366758 + AT_rich Low_complexity Low_complexity 1 21 0 209 290 14 14 chr2 78889879 78889948 -174366635 + MIR SINE MIR 62 130 -132 1554 187 27 96 chr2 78890089 78890464 -174366119 - MLT1E3 LTR MaLR -1 623 289 457 258 61 0 chr2 78890491 78890623 -174365960 - MLT1E3 LTR MaLR -514 140 1 1309 274 53 51 chr2 78890885 78891392 -174365191 + MLT1J LTR MaLR 3 510 -1 386 331 38 78 chr2 78891526 78892025 -174364558 + LTR67 LTR ERVL 5 483 -74 22 0 0 0 chr2 78892025 78892047 -174364536 + AT_rich Low_complexity Low_complexity 1 22 0 346 207 0 26 chr2 78892051 78892167 -174364416 - L1MA7 LINE L1 0 6291 6179 301 200 27 0 chr2 78892167 78892242 -174364341 + LTR67 LTR ERVL 479 555 -2 5458 194 18 16 chr2 78893355 78894488 -174362095 + L1P4 LINE L1 3968 5104 -1062 1908 65 0 4 chr2 78894488 78894717 -174361866 + AluY SINE Alu 76 303 -8 5458 194 18 16 chr2 78894717 78895291 -174361292 + L1P4 LINE L1 5104 5675 -491 387 268 89 56 chr2 78895310 78895523 -174361060 + L1ME4a LINE L1 5864 6083 -38 312 253 104 25 chr2 78895823 78895974 -174360609 - MLT1J1 LTR MaLR -3 408 248 226 95 0 24 chr2 78896248 78896290 -174360293 - MER39 LTR ERV1 -72 635 595 701 193 0 8 chr2 78896337 78896456 -174360127 - FLAM_C SINE Alu -15 118 1 6193 68 7 0 chr2 78896545 78897388 -174359195 - L1PA8 LINE L1 -7 6165 5317 308 327 99 20 chr2 78898402 78898604 -174357979 + MIR SINE MIR 13 230 -32 238 315 67 22 chr2 78900579 78900668 -174355915 + L2 LINE L2 3179 3271 -1 1025 247 218 5 chr2 78901123 78901504 -174355079 - LTR16B LTR ERVL -2 462 1 695 234 63 68 chr2 78901506 78901728 -174354855 - MIR SINE MIR -41 221 1 284 258 93 0 chr2 78901808 78901905 -174354678 - MER103 DNA DNA -58 108 3 250 349 93 51 chr2 78902084 78902299 -174354284 + MIR SINE MIR 22 245 -17 201 232 10 71 chr2 78903025 78903124 -174353459 + CT-rich Low_complexity Low_complexity 2 94 0 228 277 32 43 chr2 78903531 78903625 -174352958 + L2 LINE L2 2991 3083 -189 842 215 53 5 chr2 78903812 78903863 -174352720 + MER89 LTR ERV1 1 48 -511 243 103 0 0 chr2 78903863 78903902 -174352681 + (CAACC)n Simple_repeat Simple_repeat 2 40 0 842 215 53 5 chr2 78903902 78904243 -174352340 + MER89 LTR ERV1 48 559 0 592 211 78 1 chr2 78904245 78904383 -174352200 - MER5A DNA MER1_type -23 166 9 670 207 170 11 chr2 78904585 78904773 -174351810 + MER20 DNA MER1_type 2 219 0 378 147 27 0 chr2 78905119 78905194 -174351389 - LTR68 LTR ERV1 -663 77 1 927 229 94 64 chr2 78905332 78905784 -174350799 + MER110A LTR ERV1 36 483 0 1713 180 18 12 chr2 78906147 78906486 -174350097 - MER67C LTR ERV1 -44 666 326 2023 147 0 28 chr2 78906528 78906847 -174349736 + AluSx SINE Alu 1 310 -2 3573 145 38 18 chr2 78906857 78907534 -174349049 + L1MA7 LINE L1 5599 6289 -2 1596 178 26 29 chr2 78907548 78907891 -174348692 - MER67C LTR ERV1 -368 342 1 1517 209 61 15 chr2 78907952 78908359 -174348224 + LTR37A LTR ERV1 1 426 0 903 274 91 46 chr2 78908555 78909074 -174347509 - MER34 LTR ERV1 0 542 1 251 363 9 9 chr2 78909595 78909708 -174346875 + MIR SINE MIR 53 165 -97 449 353 16 5 chr2 78909839 78910029 -174346554 + L2 LINE L2 3121 3312 -1 261 389 74 20 chr2 78911054 78911203 -174345380 - MIR3 SINE MIR -19 189 33 495 361 85 27 chr2 78912761 78913234 -174343349 + L2 LINE L2 2551 3043 -229 596 288 87 42 chr2 78913327 78913446 -174343137 + MLT1J2 LTR MaLR 67 179 -271 6049 113 9 3 chr2 78913446 78914885 -174341698 + L1PA11 LINE L1 4709 6174 0 596 288 87 42 chr2 78914885 78915123 -174341460 + MLT1J2 LTR MaLR 179 440 -10 284 248 115 104 chr2 78915133 78915403 -174341180 + L2 LINE L2 3040 3312 -1 1419 186 61 66 chr2 78915827 78916219 -174340364 - MLT1B LTR MaLR 0 390 1 23 0 0 0 chr2 78916364 78916387 -174340196 + AT_rich Low_complexity Low_complexity 1 23 0 2782 83 11 8 chr2 78917812 78918184 -174338399 - THE1C LTR MaLR -2 373 1 222 37 0 0 chr2 78918277 78918304 -174338279 + (TA)n Simple_repeat Simple_repeat 2 28 0 2334 83 0 0 chr2 78918304 78918594 -174337989 - AluY SINE Alu -21 290 1 3426 70 2 0 chr2 78919757 78920184 -174336399 - LTR8 LTR ERV1 -104 587 160 311 159 29 43 chr2 78920557 78920626 -174335957 - MER116 DNA Mariner 0 80 13 27 49 0 0 chr2 78920903 78920944 -174335639 + AT_rich Low_complexity Low_complexity 1 41 0 1122 68 14 14 chr2 78921018 78921165 -174335418 + AluSg/x SINE Alu 160 306 -6 3988 215 90 76 chr2 79021192 79022241 -174234342 + L1M4 LINE L1 93 1126 -5520 1159 206 145 70 chr2 79022241 79022711 -174233872 - MLT1D LTR MaLR 0 505 1 3988 215 90 76 chr2 79022711 79022794 -174233789 + L1M4 LINE L1 1126 1206 -5440 2015 153 0 0 chr2 79022794 79023088 -174233495 + AluSx SINE Alu 1 294 -18 3988 215 90 76 chr2 79023088 79023909 -174232674 + L1M4 LINE L1 1206 2096 -4550 2017 112 11 0 chr2 79024026 79024435 -174232148 + AluSx SINE Alu 3 414 0 312 104 104 52 chr2 79024439 79024516 -174232067 + L1MDa LINE L1 1580 1660 -4880 917 226 53 0 chr2 79024518 79024783 -174231800 + L1MDa LINE L1 1765 2043 -4497 2353 98 0 7 chr2 79024872 79025177 -174231406 + AluSx SINE Alu 1 303 -9 7233 46 2 1 chr2 79025564 79026995 -174229588 + L1PA5 LINE L1 4719 6151 -3 732 338 128 25 chr2 79027293 79028508 -174228075 - L2 LINE L2 -527 2787 1447 521 235 176 13 chr2 79028831 79028984 -174227599 - MER5B DNA MER1_type 0 178 1 530 230 79 26 chr2 79028996 79029148 -174227435 - MER58B DNA MER1_type -4 337 178 693 138 0 0 chr2 79029169 79029285 -174227298 - L1MA8 LINE L1 -8 6283 6168 1873 115 60 47 chr2 79029289 79029671 -174226912 - L1MA8 LINE L1 -197 6094 5708 503 200 17 0 chr2 79029681 79029801 -174226782 - MER58B DNA MER1_type -161 180 59 421 226 158 92 chr2 79029846 79029908 -174226675 + MER5A DNA MER1_type 14 70 -119 2404 112 0 0 chr2 79029908 79030221 -174226362 + AluSq SINE Alu 1 313 0 421 226 158 92 chr2 79030221 79030322 -174226261 + MER5A DNA MER1_type 70 188 -1 224 287 30 50 chr2 79030942 79031043 -174225540 + MIR SINE MIR 92 190 -72 377 364 50 35 chr2 79031828 79032089 -174224494 + L2 LINE L2 2827 3091 -181 408 347 29 64 chr2 79032636 79032784 -174223799 + LTR16C LTR ERVL 97 249 -242 2231 126 3 0 chr2 79032784 79033093 -174223490 - AluSx SINE Alu -2 310 1 408 347 29 64 chr2 79033093 79033290 -174223293 + LTR16C LTR ERVL 249 430 -61 422 253 55 20 chr2 79034046 79034192 -174222391 - MLT1K LTR MaLR -6 582 432 239 227 18 100 chr2 79034669 79034779 -174221804 + L2 LINE L2 3158 3258 -55 198 0 0 0 chr2 79035420 79035442 -174221141 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 4423 158 62 54 chr2 79036154 79036267 -174220316 - L1MA7 LINE L1 0 6291 6180 2262 123 0 0 chr2 79036267 79036568 -174220015 - AluSx SINE Alu -11 301 1 4423 158 62 54 chr2 79036568 79037365 -174219218 - L1MA7 LINE L1 -111 6180 5391 2244 123 0 0 chr2 79037365 79037674 -174218909 + AluSx SINE Alu 1 309 -3 4423 158 62 54 chr2 79037674 79038024 -174218559 - L1MA7 LINE L1 -900 5391 5045 1268 188 100 4 chr2 79038024 79038285 -174218298 - AluJo SINE Alu -16 286 1 4423 158 62 54 chr2 79038285 79038365 -174218218 - L1MA7 LINE L1 -1246 5045 4967 267 104 0 0 chr2 79038365 79038413 -174218170 + (TTTG)n Simple_repeat Simple_repeat 2 49 0 2103 136 0 0 chr2 79038421 79038708 -174217875 - AluSx SINE Alu -25 287 1 4423 158 62 54 chr2 79038708 79038798 -174217785 - L1MA7 LINE L1 -1330 4961 4873 1697 141 90 17 chr2 79038798 79039088 -174217495 + AluSx SINE Alu 1 311 -1 4423 158 62 54 chr2 79039088 79039263 -174217320 - L1MA7 LINE L1 -1418 4873 4681 985 180 0 0 chr2 79039268 79039446 -174217137 + L1 LINE L1 3864 4041 -2105 1038 165 94 28 chr2 79039679 79039934 -174216649 - ORSL DNA AcHobo -1 274 3 25 51 0 0 chr2 79041013 79041052 -174215531 + AT_rich Low_complexity Low_complexity 1 39 0 468 309 119 24 chr2 79041426 79041678 -174214905 + MLT1K LTR MaLR 20 295 -293 1596 184 0 42 chr2 79041757 79042066 -174214517 + AluJo SINE Alu 1 296 -16 294 298 22 28 chr2 79042123 79042301 -174214282 + GA-rich Low_complexity Low_complexity 2 178 0 4600 77 20 15 chr2 79142343 79142992 -174113591 + LTR17 LTR ERV1 129 780 0 3800 95 12 2 chr2 79143022 79143580 -174113003 + L1PA13 LINE L1 5597 6160 -3 253 241 54 0 chr2 79143759 79143871 -174112712 - L1M4 LINE L1 -1443 4703 4586 502 301 79 75 chr2 79143941 79144423 -174112160 + L1ME4a LINE L1 5303 5786 -335 1358 213 94 20 chr2 79145496 79145890 -174110693 - L1ME1 LINE L1 -72 6094 5672 * 1561 201 6 3 chr2 79145886 79146401 -174110182 + MLT1B-int LTR MaLR 319 883 -488 333 68 0 0 chr2 79146831 79146875 -174109708 + (CA)n Simple_repeat Simple_repeat 2 45 0 29 28 0 0 chr2 79148101 79148137 -174108446 + AT_rich Low_complexity Low_complexity 1 36 0 289 299 126 16 chr2 79149646 79149773 -174106810 - L2 LINE L2 0 3313 3173 2132 62 44 0 chr2 79149915 79150187 -174106396 + AluY SINE Alu 1 284 -27 756 173 13 13 chr2 79150298 79150448 -174106135 + MLT1B-int LTR MaLR 1221 1370 -1 2046 158 51 8 chr2 79150456 79150830 -174105753 + MLT1B LTR MaLR 1 390 0 1335 218 27 49 chr2 79150834 79151135 -174105448 - L1ME1 LINE L1 -693 5666 5360 1768 161 7 42 chr2 79151135 79151445 -174105138 - AluJo SINE Alu -1 311 13 1335 218 27 49 chr2 79151445 79151856 -174104727 - L1ME1 LINE L1 -999 5360 4966 593 200 59 65 chr2 79151858 79152028 -174104555 + MLT1E3 LTR MaLR 51 219 -405 686 262 87 17 chr2 79152111 79152486 -174104097 + MLT2F LTR ERVL 209 646 -17 315 293 53 20 chr2 79152854 79153004 -174103579 + L1ME4a LINE L1 5941 6095 -26 1221 228 67 25 chr2 79153005 79153364 -174103219 + MLT1A2 LTR MaLR 1 374 0 180 97 0 0 chr2 79153415 79153446 -174103137 + (A)n Simple_repeat Simple_repeat 1 31 0 30965 50 8 2 chr2 79153853 79157795 -174098788 + HERV17 LTR ERV1 2053 6019 -2607 261 103 0 0 chr2 79157788 79157827 -174098756 + HERV17 LTR ERV1 7510 7548 -1078 * 2242 65 0 0 chr2 79157817 79158109 -174098474 + HERV17 LTR ERV1 8335 8626 0 1099 55 62 0 chr2 79158109 79158254 -174098329 + LTR17 LTR ERV1 1 154 -626 14345 57 26 11 chr2 79158768 79160718 -174095865 - HERV17 LTR ERV1 -6647 1979 1 5953 75 13 3 chr2 79160718 79161490 -174095093 - LTR17 LTR ERV1 0 780 1 648 209 120 0 chr2 79161490 79161681 -174094902 - L1MD3 LINE L1 -14 7981 7768 546 310 51 55 chr2 79161907 79162358 -174094225 - L2 LINE L2 -54 3259 2772 1072 170 40 36 chr2 79162359 79162583 -174094000 - AluJo SINE Alu -1 311 87 3443 170 29 6 chr2 79162658 79163346 -174093237 + MER67C LTR ERV1 7 710 0 204 229 0 66 chr2 79163346 79163407 -174093176 - MIR SINE MIR -9 253 197 485 329 53 34 chr2 79163455 79163759 -174092824 + L1MC4a LINE L1 5295 5603 -518 2195 77 30 10 chr2 79164461 79164761 -174091822 - AluSx SINE Alu -6 306 1 340 313 86 14 chr2 79165104 79165395 -174091188 + L1MC4a LINE L1 5600 5911 -1897 304 229 105 59 chr2 79165506 79165659 -174090924 - MLT1J LTR MaLR -7 461 284 239 260 48 29 chr2 79165716 79165820 -174090763 - MLT1J2 LTR MaLR -286 164 59 2497 208 30 57 chr2 79167573 79168827 -174087756 - L1MB7 LINE L1 -121 6063 4844 6016 220 55 27 chr2 79168852 79170571 -174086012 - L1M4 LINE L1 -4835 1707 1 321 271 0 47 chr2 79171738 79171845 -174084738 + MER5B DNA MER1_type 2 103 -75 35 0 0 0 chr2 79172003 79172038 -174084545 + AT_rich Low_complexity Low_complexity 1 35 0 240 231 39 0 chr2 79172891 79172943 -174083640 + (CACG)n Simple_repeat Simple_repeat 1 54 0 396 309 53 36 chr2 79173407 79173590 -174082993 - L1MEd LINE L1 -4908 2023 1839 40 49 0 0 chr2 79173645 79173706 -174082877 + AT_rich Low_complexity Low_complexity 1 61 0 274 209 228 62 chr2 79173831 79174090 -174082493 - L1MEd LINE L1 -4929 1494 1193 22 56 0 0 chr2 79175578 79175614 -174080969 + AT_rich Low_complexity Low_complexity 1 36 0 23 68 0 0 chr2 79175794 79175838 -174080745 + AT_rich Low_complexity Low_complexity 1 44 0 2506 7 0 7 chr2 79176107 79176385 -174080198 + AluYa5 SINE Alu 2 277 -34 330 26 0 0 chr2 79176486 79176525 -174080058 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 608 256 106 0 chr2 79176697 79176896 -174079687 + HAL1 LINE L1 1516 1735 -772 21 57 0 0 chr2 79177348 79177383 -174079200 + AT_rich Low_complexity Low_complexity 1 35 0 1460 135 106 16 chr2 79177750 79177872 -174078711 + AluSx SINE Alu 1 111 -201 399 21 0 0 chr2 79177872 79177920 -174078663 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 1460 135 106 16 chr2 79177920 79178042 -174078541 + AluSx SINE Alu 111 267 -45 1299 283 158 52 chr2 79178065 79179654 -174076929 + HAL1 LINE L1 750 2507 0 352 315 111 8 chr2 79179680 79179915 -174076668 + L1M4 LINE L1 3589 3847 -2299 24 53 0 0 chr2 79179915 79179953 -174076630 + AT_rich Low_complexity Low_complexity 1 38 0 270 221 88 9 chr2 79180108 79180221 -174076362 + L1M4 LINE L1 4117 4238 -1908 24 67 0 0 chr2 79180244 79180289 -174076294 + AT_rich Low_complexity Low_complexity 1 45 0 1287 254 146 20 chr2 79180549 79180994 -174075589 - MLT1D LTR MaLR -4 501 1 6328 138 73 9 chr2 79181103 79181294 -174075289 - Tigger3b DNA MER2_type -1798 1230 1053 1555 209 64 109 chr2 79181294 79181874 -174074709 + MLT2B3 LTR ERVL 1 554 0 6328 138 73 9 chr2 79181874 79182838 -174073745 - Tigger3b DNA MER2_type -1975 1053 1 1940 193 67 55 chr2 79183312 79183616 -174072967 - MLT1D LTR MaLR -48 457 145 1040 240 38 48 chr2 79183616 79184016 -174072567 + MLT2C1 LTR ERVL 1 396 -1 1940 193 67 55 chr2 79184016 79184162 -174072421 - MLT1D LTR MaLR -360 145 2 25 0 0 0 chr2 79184288 79184313 -174072270 + AT_rich Low_complexity Low_complexity 1 25 0 226 300 73 9 chr2 79184531 79184641 -174071942 + L1ME LINE L1 5383 5499 -622 15611 156 20 12 chr2 79184683 79185463 -174071120 - L1MA2 LINE L1 0 7723 6951 2565 27 3 0 chr2 79185463 79185758 -174070825 + AluY SINE Alu 1 296 -15 15611 156 20 12 chr2 79185758 79188670 -174067913 - L1MA2 LINE L1 -772 6951 3980 270 0 0 0 chr2 79188670 79188700 -174067883 + (TTG)n Simple_repeat Simple_repeat 1 30 0 15611 156 20 12 chr2 79188700 79189657 -174066926 - L1MA2 LINE L1 -3743 3980 3032 318 57 94 0 chr2 79189657 79189710 -174066873 - L1PA15 LINE L1 0 6165 6108 12911 181 42 10 chr2 79189811 79192123 -174064460 - L1MA2 LINE L1 -5167 2398 14 1459 279 124 19 chr2 79192288 79192862 -174063721 + L2 LINE L2 2168 2801 -513 280 298 0 12 chr2 79192871 79192955 -174063628 + MER94 DNA DNA 12 94 -40 909 316 121 11 chr2 79192965 79193411 -174063172 + L2 LINE L2 2819 3313 0 261 287 37 0 chr2 79193435 79193543 -174063040 + L1ME LINE L1 5713 5824 -297 476 291 159 18 chr2 79194124 79194351 -174062232 + MLT1J1 LTR MaLR 58 316 -130 504 268 152 15 chr2 79196539 79196934 -174059649 - L1ME4a LINE L1 -56 6065 5617 30 59 0 0 chr2 79196964 79197015 -174059568 + AT_rich Low_complexity Low_complexity 1 51 0 217 245 10 10 chr2 79197143 79197241 -174059342 + (TA)n Simple_repeat Simple_repeat 2 99 0 185 163 47 0 chr2 79197519 79197562 -174059021 + (TATG)n Simple_repeat Simple_repeat 2 46 0 1872 157 3 3 chr2 79198486 79198772 -174057811 - AluJb SINE Alu -22 290 5 182 330 80 27 chr2 79201364 79201476 -174055107 + MIR SINE MIR 27 144 -64 1094 156 18 71 chr2 79202621 79202845 -174053738 - Tigger2a DNA MER2_type -222 212 1 553 316 0 20 chr2 79204968 79205120 -174051463 + MLT1H1 LTR MaLR 3 151 -404 363 229 90 33 chr2 79205125 79205339 -174051244 + MLT1H1 LTR MaLR 325 589 -1 231 88 0 0 chr2 79206633 79206667 -174049916 + (TG)n Simple_repeat Simple_repeat 1 34 0 946 239 49 133 chr2 79206680 79207247 -174049336 - MLT1G LTR MaLR -1 589 79 1542 6 0 0 chr2 79207247 79207416 -174049167 + AluYa5 SINE Alu 141 309 -2 946 239 49 133 chr2 79207416 79207479 -174049104 - MLT1G LTR MaLR -511 79 12 264 254 0 0 chr2 79208098 79208177 -174048406 + (TG)n Simple_repeat Simple_repeat 1 79 0 288 0 0 0 chr2 79208227 79208259 -174048324 + (T)n Simple_repeat Simple_repeat 1 32 0 21 36 0 0 chr2 79208298 79208326 -174048257 + AT_rich Low_complexity Low_complexity 1 28 0 1127 67 0 0 chr2 79208463 79208612 -174047971 - L1PA6 LINE L1 -2 6152 6004 213 282 129 0 chr2 79210073 79210158 -174046425 + MIR SINE MIR 167 262 0 188 298 48 36 chr2 79211338 79211422 -174045161 + MIR SINE MIR 59 143 -119 434 312 233 53 chr2 79212004 79212437 -174044146 + L2 LINE L2 939 1449 -1865 688 326 72 59 chr2 79212550 79213093 -174043490 + L2 LINE L2 1912 2461 -853 641 339 53 47 chr2 79213121 79213521 -174043062 + L2 LINE L2 2718 3136 -177 2288 104 0 0 chr2 79213521 79213818 -174042765 - AluSq SINE Alu -16 297 1 641 339 53 47 chr2 79213818 79213998 -174042585 + L2 LINE L2 3136 3313 0 257 382 16 48 chr2 79214833 79215019 -174041564 + L2 LINE L2 2907 3086 -186 4974 201 23 19 chr2 79215555 79216629 -174039954 - L1P4 LINE L1 -691 5475 4396 261 0 0 0 chr2 79216629 79216658 -174039925 + (TTA)n Simple_repeat Simple_repeat 1 29 0 4974 201 23 19 chr2 79216658 79216864 -174039719 - L1P4 LINE L1 -1770 4396 4192 393 258 67 117 chr2 79217556 79217897 -174038686 + L2 LINE L2 2181 2504 -810 1573 136 88 54 chr2 79217897 79218249 -174038334 + THE1B LTR MaLR 1 364 0 8619 133 15 50 chr2 79218252 79218303 -174038280 + THE1B-int LTR MaLR 4 55 -1525 2233 79 24 0 chr2 79218303 79218594 -174037989 + AluY SINE Alu 1 298 -13 2772 7 0 0 chr2 79218597 79218898 -174037685 + AluYa5 SINE Alu 1 301 -10 8619 133 15 50 chr2 79218898 79220332 -174036251 + THE1B-int LTR MaLR 57 1440 -140 2105 108 3 33 chr2 79220436 79220492 -174036091 - L1PB1 LINE L1 0 6151 6095 2143 134 0 3 chr2 79220492 79220790 -174035793 - AluSp SINE Alu -16 297 1 2105 108 3 33 chr2 79220790 79221065 -174035518 - L1PB1 LINE L1 -56 6095 5830 1136 214 8 8 chr2 79221065 79221327 -174035256 + L1P LINE L1 5084 5345 -801 2673 29 0 13 chr2 79221731 79222037 -174034546 + AluY SINE Alu 1 302 -9 195 42 0 0 chr2 79222168 79222192 -174034391 + (T)n Simple_repeat Simple_repeat 1 24 0 220 231 29 115 chr2 79222918 79223022 -174033561 + L2 LINE L2 3180 3274 -39 1068 239 0 5 chr2 79223165 79223374 -174033209 - MER58A DNA MER1_type -16 208 1 1921 142 24 18 chr2 79224069 79224407 -174032176 - L1MC1 LINE L1 0 6333 5994 273 289 39 10 chr2 79224790 79224894 -174031689 - LTR67 LTR ERVL 0 557 451 180 349 47 23 chr2 79225598 79225727 -174030856 - L2 LINE L2 -189 3083 2952 305 325 84 12 chr2 79226268 79226434 -174030149 - L2 LINE L2 -955 2359 2182 5378 240 104 14 chr2 79226627 79228216 -174028367 - Charlie8 DNA MER1_type -332 2085 354 738 297 34 31 chr2 79228352 79228766 -174027817 - L1M4 LINE L1 -3285 2861 2447 1767 226 69 106 chr2 79229072 79229958 -174026625 - L1MC4 LINE L1 0 8042 7190 257 289 12 24 chr2 79230132 79230215 -174026368 + MER5A DNA MER1_type 79 160 -29 252 286 0 0 chr2 79232051 79232107 -174024476 + polypyrimidine Low_complexity Low_complexity 1 56 0 919 215 31 27 chr2 79233192 79233452 -174023131 - L1MC5 LINE L1 -63 7898 7638 357 321 44 6 chr2 79234490 79234659 -174021924 + MIR SINE MIR 14 191 -65 2147 105 3 0 chr2 79234673 79234969 -174021614 - AluSp SINE Alu -16 297 1 21 36 0 0 chr2 79235068 79235096 -174021487 + AT_rich Low_complexity Low_complexity 1 28 0 190 261 0 0 chr2 79235134 79235180 -174021403 + MIR3 SINE MIR 160 205 -3 540 258 57 6 chr2 79235267 79235426 -174021157 - LTR16A LTR ERVL -3 447 281 1111 206 52 102 chr2 79235797 79236181 -174020402 + MLT1A1 LTR MaLR 1 365 0 21 36 0 0 chr2 79237009 79237037 -174019546 + AT_rich Low_complexity Low_complexity 1 28 0 638 220 8 23 chr2 79237332 79237464 -174019119 - MER58A DNA MER1_type 0 134 5 260 271 41 91 chr2 79237625 79237977 -174018606 - MLT1I LTR MaLR -117 432 71 187 377 0 0 chr2 79238048 79238109 -174018474 - MER5A DNA MER1_type -63 126 66 286 109 0 22 chr2 79239409 79239455 -174017128 - MER58 DNA MER1_type -3 2417 2373 1298 190 35 31 chr2 79239470 79239760 -174016823 + MSTA LTR MaLR 138 428 0 2075 246 77 18 chr2 79239828 79240564 -174016019 + L1M4 LINE L1 2209 2988 -3158 246 314 146 23 chr2 79240938 79241158 -174015425 + L2 LINE L2 2615 2861 -453 472 148 0 0 chr2 79241617 79241698 -174014885 - MLT1D LTR MaLR 0 505 425 532 236 43 26 chr2 79241701 79241926 -174014657 - MSTD LTR MaLR -6 390 114 3680 244 18 59 chr2 79241960 79243012 -174013571 - MSTD-int LTR MaLR -725 1010 2 975 216 101 4 chr2 79243038 79243265 -174013318 - MSTD LTR MaLR -53 343 95 1713 226 58 17 chr2 79243319 79243730 -174012853 - MLT1D LTR MaLR -73 432 5 211 354 0 0 chr2 79243876 79243941 -174012642 + L2 LINE L2 3180 3244 -69 27 49 0 0 chr2 79244287 79244328 -174012255 + AT_rich Low_complexity Low_complexity 1 41 0 2439 144 2 78 chr2 79244349 79244808 -174011775 + MSTC LTR MaLR 3 426 -2 379 276 121 45 chr2 79244965 79245230 -174011353 + L2 LINE L2 2111 2395 -919 246 191 12 24 chr2 79245491 79245575 -174011008 + CT-rich Low_complexity Low_complexity 4 86 0 666 278 0 23 chr2 79245743 79245916 -174010667 + MER45A DNA AcHobo 1 169 -9 225 294 10 20 chr2 79246239 79246341 -174010242 + L1ME LINE L1 5327 5427 -932 871 153 35 0 chr2 79246456 79246626 -174009957 - L1MA8 LINE L1 -4 6287 6112 1195 144 5 0 chr2 79246637 79246838 -174009745 + L1PB1 LINE L1 1 202 -6661 * 14198 198 23 6 chr2 79246831 79252319 -174004264 + L1PB1 LINE L1 1113 6865 -2 2645 152 73 6 chr2 79252337 79252832 -174003751 - L1MA8 LINE L1 -177 6114 5587 301 335 119 21 chr2 79252912 79253106 -174003477 + L1ME LINE L1 5507 5719 -402 24 67 0 0 chr2 79253239 79253284 -174003299 + AT_rich Low_complexity Low_complexity 1 45 0 3832 224 9 2 chr2 79253671 79254563 -174002020 - L1PB1 LINE L1 -1051 5095 4198 * 5151 115 23 17 chr2 79254547 79255465 -174001118 + L1PB1 LINE L1 5118 6043 -108 40 21 0 0 chr2 79255565 79255612 -174000971 + AT_rich Low_complexity Low_complexity 1 47 0 524 71 65 35 chr2 79255612 79255782 -174000801 + (TTATA)n Simple_repeat Simple_repeat 5 179 0 47 0 0 0 chr2 79255782 79255829 -174000754 + AT_rich Low_complexity Low_complexity 1 47 0 327 112 45 39 chr2 79255829 79256007 -174000576 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 29 28 0 0 chr2 79256007 79256043 -174000540 + AT_rich Low_complexity Low_complexity 1 36 0 427 112 57 26 chr2 79256043 79256346 -174000237 + (TATAA)n Simple_repeat Simple_repeat 1 312 0 3187 194 48 15 chr2 79256351 79257035 -173999548 + L1 LINE L1 3584 4290 -1856 28 0 0 0 chr2 79257375 79257403 -173999180 + AT_rich Low_complexity Low_complexity 1 28 0 28 29 0 0 chr2 79257630 79257665 -173998918 + AT_rich Low_complexity Low_complexity 1 35 0 307 349 92 20 chr2 79257686 79257978 -173998605 - L1ME3A LINE L1 -233 5937 5625 500 380 120 29 chr2 79258633 79259074 -173997509 - L2 LINE L2 0 3272 2752 2359 76 3 16 chr2 79259074 79259391 -173997192 - AluSp SINE Alu 0 313 1 500 380 120 29 chr2 79259391 79259577 -173997006 - L2 LINE L2 -520 2752 2584 238 141 42 42 chr2 79260040 79260111 -173996472 + MER39B LTR ERV1 537 607 -46 297 75 0 0 chr2 79260451 79260491 -173996092 + (T)n Simple_repeat Simple_repeat 1 40 0 35 0 0 0 chr2 79261245 79261280 -173995303 + AT_rich Low_complexity Low_complexity 1 35 0 748 140 167 20 chr2 79262059 79262209 -173994374 + AluJo SINE Alu 122 293 -19 437 347 87 10 chr2 79262927 79263123 -173993460 - MIR SINE MIR -32 230 20 296 247 0 27 chr2 79263478 79263551 -173993032 + AluS SINE Alu 5 75 -228 1120 221 51 92 chr2 79263596 79263795 -173992788 - MLT1A2 LTR MaLR -1 373 196 282 29 0 0 chr2 79263795 79263830 -173992753 + (GA)n Simple_repeat Simple_repeat 2 36 0 1120 221 51 92 chr2 79263830 79264019 -173992564 - MLT1A2 LTR MaLR -178 196 1 2487 36 7 0 chr2 79264049 79264351 -173992232 - AluY SINE Alu -7 304 1 1193 226 70 88 chr2 79265026 79265352 -173991231 - MLT1D LTR MaLR 0 505 190 2186 95 23 7 chr2 79265352 79265657 -173990926 + AluSx SINE Alu 1 310 -2 1193 226 70 88 chr2 79265657 79265844 -173990739 - MLT1D LTR MaLR -315 190 1 21 0 0 0 chr2 79266101 79266122 -173990461 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 79266224 79266248 -173990335 + AT_rich Low_complexity Low_complexity 1 24 0 4665 166 28 63 chr2 79266671 79267850 -173988733 + L1 LINE L1 4208 5345 -801 2392 152 43 5 chr2 79268376 79268816 -173987767 + L1P5 LINE L1 5337 5793 -363 1635 191 3 79 chr2 79269059 79269437 -173987146 + MLT1B LTR MaLR 1 349 -41 2113 117 0 7 chr2 79269950 79270250 -173986333 + AluY SINE Alu 1 298 -13 186 224 149 0 chr2 79270419 79270486 -173986097 + MIR SINE MIR 176 252 -10 360 177 43 43 chr2 79270706 79270923 -173985660 + (TA)n Simple_repeat Simple_repeat 1 217 0 350 270 10 0 chr2 79270990 79271090 -173985493 - L1ME3A LINE L1 -295 5875 5775 560 151 9 0 chr2 79271346 79271452 -173985131 + L1MA9 LINE L1 6206 6312 0 180 111 0 0 chr2 79272465 79272492 -173984091 + (TG)n Simple_repeat Simple_repeat 2 28 0 577 311 56 11 chr2 79272946 79273216 -173983367 + L1ME4a LINE L1 5576 5857 -264 1138 22 0 0 chr2 79273412 79273548 -173983035 - L1PA4 LINE L1 0 6155 6020 391 323 94 18 chr2 79273548 79273673 -173982910 + MLT1J LTR MaLR 226 340 -171 1571 141 4 4 chr2 79273673 79273914 -173982669 + AluSx SINE Alu 1 241 -71 391 323 94 18 chr2 79273914 79274011 -173982572 + MLT1J LTR MaLR 340 465 -46 247 257 27 0 chr2 79274106 79274180 -173982403 + (TA)n Simple_repeat Simple_repeat 1 76 0 22 35 0 0 chr2 79274239 79274268 -173982315 + AT_rich Low_complexity Low_complexity 1 29 0 27 62 0 0 chr2 79274297 79274345 -173982238 + AT_rich Low_complexity Low_complexity 1 48 0 572 94 0 12 chr2 79274705 79274790 -173981793 + MLT1A1 LTR MaLR 282 365 0 5352 196 43 20 chr2 79275114 79275438 -173981145 + L1 LINE L1 2 317 -6011 2119 131 111 8 chr2 79275438 79275826 -173980757 - MSTA LTR MaLR 0 428 1 5352 196 43 20 chr2 79275826 79277793 -173978790 + L1 LINE L1 317 2344 -3984 4571 181 39 11 chr2 79277790 79278653 -173977930 + L1 LINE L1 3966 4860 -1468 * 386 20 20 0 chr2 79278653 79278704 -173977879 + (CA)n Simple_repeat Simple_repeat 1 52 0 4571 181 39 11 chr2 79278704 79278789 -173977794 + L1 LINE L1 4860 4941 -1387 * 6758 177 38 23 chr2 79278780 79280184 -173976399 - L1 LINE L1 -2352 5213 3760 1779 132 181 27 chr2 79280184 79280555 -173976028 - MSTA LTR MaLR 0 428 1 6758 177 38 23 chr2 79280555 79281560 -173975023 - L1 LINE L1 -3805 3760 2771 2720 108 3 3 chr2 79281560 79281939 -173974644 + LTR1 LTR ERV1 407 785 0 810 170 33 7 chr2 79282303 79282456 -173974127 + L1M1 LINE L1 22 178 -7387 230 164 110 41 chr2 79282456 79282529 -173974054 - LTR1 LTR ERV1 -707 78 1 24 0 0 0 chr2 79282567 79282591 -173973992 + AT_rich Low_complexity Low_complexity 1 24 0 29 0 0 0 chr2 79282849 79282878 -173973705 + AT_rich Low_complexity Low_complexity 1 29 0 428 246 181 9 chr2 79284157 79284419 -173972164 + Charlie8 DNA MER1_type 35 1417 -1000 2325 86 3 0 chr2 79284512 79284813 -173971770 + AluSg SINE Alu 1 302 -8 1371 157 40 7 chr2 79284956 79285230 -173971353 - L1PB4 LINE L1 -7 6149 5867 228 67 0 0 chr2 79285234 79285264 -173971319 + (CA)n Simple_repeat Simple_repeat 2 31 0 6437 188 34 4 chr2 79285274 79286601 -173969982 - L1PB4 LINE L1 -394 5762 4370 405 0 0 0 chr2 79286601 79286646 -173969937 + (TG)n Simple_repeat Simple_repeat 2 46 0 6437 188 34 4 chr2 79286646 79287164 -173969419 - L1PB4 LINE L1 -1786 4370 3869 256 239 60 26 chr2 79287650 79287767 -173968816 - L1M4 LINE L1 -745 5401 5281 947 216 57 12 chr2 79288207 79288452 -173968131 + L1MB7 LINE L1 5929 6184 0 455 317 99 12 chr2 79288817 79288978 -173967605 - MER5B DNA MER1_type -3 175 1 418 259 26 17 chr2 79289097 79289213 -173967370 + MER5A DNA MER1_type 20 136 -53 1548 154 15 126 chr2 79289213 79289602 -173966981 + MER7A DNA MER2_type 2 345 -1 239 224 48 48 chr2 79289858 79289983 -173966600 - HAL1b LINE L1 -435 913 789 22 35 0 0 chr2 79290867 79290896 -173965687 + AT_rich Low_complexity Low_complexity 1 29 0 33 43 0 0 chr2 79291495 79291542 -173965041 + AT_rich Low_complexity Low_complexity 1 47 0 1744 150 57 35 chr2 79291891 79292258 -173964325 + THE1C LTR MaLR 1 375 0 26 30 0 0 chr2 79292447 79292480 -173964103 + AT_rich Low_complexity Low_complexity 1 33 0 246 287 50 10 chr2 79292480 79292581 -173964002 - L2 LINE L2 -952 2362 2258 539 277 69 20 chr2 79292608 79292810 -173963773 - L2 LINE L2 -1314 2000 1789 272 70 23 0 chr2 79293605 79293648 -173962935 + (TG)n Simple_repeat Simple_repeat 1 44 0 343 357 40 44 chr2 79294756 79294887 -173961696 - L1MC/D LINE L1 -1992 5816 5685 1584 186 28 0 chr2 79294887 79295178 -173961405 - AluSx SINE Alu -12 300 2 343 357 40 44 chr2 79295178 79295298 -173961285 - L1MC/D LINE L1 -2123 5685 5566 6210 169 62 15 chr2 79295533 79297426 -173959157 + L1MA6 LINE L1 3958 5973 -327 2102 103 3 32 chr2 79297426 79297737 -173958846 + AluSg SINE Alu 1 302 -8 6210 169 62 15 chr2 79297737 79298072 -173958511 + L1MA6 LINE L1 5973 6291 -9 1192 263 158 27 chr2 79298329 79298778 -173957805 - L2 LINE L2 0 3313 2806 8283 198 27 10 chr2 79298866 79301395 -173955188 - L1PA16 LINE L1 -2 6164 3591 207 0 0 0 chr2 79301395 79301418 -173955165 + (TTG)n Simple_repeat Simple_repeat 2 24 0 8283 198 27 10 chr2 79301418 79301702 -173954881 - L1PA16 LINE L1 -2575 3591 3313 2860 248 58 27 chr2 79301721 79302318 -173954265 + L1 LINE L1 2258 2903 -3243 1956 139 4 0 chr2 79302318 79302642 -173953941 + AluSg SINE Alu 1 325 0 2860 248 58 27 chr2 79302642 79303054 -173953529 + L1 LINE L1 2903 3300 -2846 1841 193 53 48 chr2 79303056 79303580 -173953003 + Charlie5 DNA MER1_type 154 680 -1932 1263 211 59 11 chr2 79303578 79303934 -173952649 + Charlie5 DNA MER1_type 2252 2624 0 * 807 110 0 0 chr2 79304327 79304436 -173952147 + FLAM_C SINE Alu 14 122 -21 22 35 0 0 chr2 79304438 79304467 -173952116 + AT_rich Low_complexity Low_complexity 1 29 0 2172 105 7 0 chr2 79304930 79305226 -173951357 + AluSc SINE Alu 1 298 -11 444 319 69 82 chr2 79305270 79305893 -173950690 - HAL1 LINE L1 -916 1591 977 277 380 73 26 chr2 79306923 79307115 -173949468 - MIR3 SINE MIR -3 205 5 382 291 112 54 chr2 79307800 79308041 -173948542 + MIR SINE MIR 5 259 -3 932 293 123 40 chr2 79308177 79308648 -173947935 - L2 LINE L2 0 3313 2804 580 298 128 0 chr2 79309602 79309837 -173946746 - MLT1I LTR MaLR -58 351 87 328 384 36 22 chr2 79310443 79310667 -173945916 + MLT1K LTR MaLR 2 228 -360 403 344 69 0 chr2 79311148 79311308 -173945275 + MIR3 SINE MIR 33 203 -5 295 222 120 26 chr2 79311759 79311876 -173944707 - MER94 DNA DNA -6 128 1 348 254 92 31 chr2 79312526 79312656 -173943927 + MER5A DNA MER1_type 20 157 -32 6256 36 0 1 chr2 79313516 79314268 -173942315 + L1PA4 LINE L1 5401 6151 -4 1858 189 18 3 chr2 79314308 79314646 -173941937 - MER2 DNA MER2_type 0 344 2 23 0 0 0 chr2 79314656 79314679 -173941904 + AT_rich Low_complexity Low_complexity 1 23 0 1850 135 124 59 chr2 79314707 79315253 -173941330 + MER4A LTR ERV1 1 444 -21 21 0 0 0 chr2 79315284 79315305 -173941278 + AT_rich Low_complexity Low_complexity 1 21 0 2050 187 44 5 chr2 79317297 79317703 -173938880 + MER95 LTR ERV 10 431 0 3091 160 9 59 chr2 79318043 79318687 -173937896 - LTR9 LTR ERV1 0 612 1 336 322 0 0 chr2 79318840 79318961 -173937622 + L1ME4a LINE L1 2683 2803 -3343 324 333 48 18 chr2 79318967 79319132 -173937451 + L1ME4a LINE L1 3718 3887 -2259 727 178 58 42 chr2 79320309 79320500 -173936083 + LTR37A LTR ERV1 4 197 -229 853 167 24 24 chr2 79320600 79320810 -173935773 + LTR37A LTR ERV1 217 426 0 11056 28 0 0 chr2 79321675 79323747 -173932836 - L1PA3 LINE L1 -1 6154 4077 4162 150 31 3 chr2 79324104 79324849 -173931734 + L1MA8 LINE L1 5522 6287 -4 421 160 53 0 chr2 79324893 79324968 -173931615 + MLT1C LTR MaLR 65 143 -324 1352 207 19 7 chr2 79325248 79325519 -173931064 + MLT1C LTR MaLR 194 467 0 262 311 100 11 chr2 79327081 79327171 -173929412 - L2 LINE L2 -52 3220 3123 624 246 33 102 chr2 79327244 79327488 -173929095 - MIR SINE MIR -21 241 15 445 300 58 49 chr2 79327512 79327938 -173928645 - L2 LINE L2 -195 3077 2646 369 0 0 0 chr2 79328544 79328585 -173927998 + (CA)n Simple_repeat Simple_repeat 1 41 0 336 48 0 0 chr2 79328889 79328931 -173927652 + (CA)n Simple_repeat Simple_repeat 1 42 0 373 274 156 76 chr2 79328954 79329288 -173927295 + L1ME4a LINE L1 4680 4986 -1160 2082 132 0 0 chr2 79329288 79329576 -173927007 + AluSc SINE Alu 1 288 -21 373 274 156 76 chr2 79329576 79329642 -173926941 + L1ME4a LINE L1 4986 5045 -1101 7065 54 7 0 chr2 79329642 79330742 -173925841 + L1PA7 LINE L1 5049 6154 0 373 274 156 76 chr2 79330742 79330974 -173925609 + L1ME4a LINE L1 5045 5364 -782 277 318 70 20 chr2 79331083 79331284 -173925299 + L1ME4a LINE L1 5493 5703 -418 10402 219 28 76 chr2 79331333 79333176 -173923407 + L1M2 LINE L1 4 1551 -5297 1105 91 0 0 chr2 79333176 79333330 -173923253 - L1PA8 LINE L1 -5 6167 6014 10402 219 28 76 chr2 79333330 79335399 -173921184 + L1M2 LINE L1 1551 3719 -3129 1254 134 51 24 chr2 79335396 79335641 -173920942 + L1MA4A LINE L1 5281 5518 -785 * 2079 114 88 23 chr2 79335641 79335983 -173920600 + THE1B LTR MaLR 1 364 0 10624 118 29 1 chr2 79335983 79337520 -173919063 + THE1B-int LTR MaLR 1 1580 0 2089 138 48 28 chr2 79337520 79337876 -173918707 + THE1B LTR MaLR 1 363 -1 2004 172 59 25 chr2 79337884 79338439 -173918144 + L1MA4A LINE L1 5662 6296 -7 241 288 170 20 chr2 79338585 79338738 -173917845 + L1ME4a LINE L1 5940 6115 -6 1093 174 3 20 chr2 79338953 79339239 -173917344 + MLT1A1 LTR MaLR 1 365 0 240 297 0 33 chr2 79340466 79340557 -173916026 - MIR SINE MIR -56 206 119 1033 261 132 34 chr2 79340564 79340943 -173915640 + MLT1E LTR MaLR 178 593 0 462 326 49 20 chr2 79340943 79341254 -173915329 + L1ME LINE L1 5492 5811 -358 2279 103 7 0 chr2 79341321 79341623 -173914960 + AluSc SINE Alu 1 304 -5 28 29 0 0 chr2 79343144 79343179 -173913404 + AT_rich Low_complexity Low_complexity 1 35 0 360 152 0 0 chr2 79344001 79344067 -173912516 + (TG)n Simple_repeat Simple_repeat 1 66 0 576 186 6 33 chr2 79344765 79344948 -173911635 + (TATATG)n Simple_repeat Simple_repeat 3 180 0 217 0 36 0 chr2 79344948 79344976 -173911607 + (TA)n Simple_repeat Simple_repeat 2 30 0 209 205 0 0 chr2 79345269 79345308 -173911275 + (TG)n Simple_repeat Simple_repeat 1 39 0 861 226 93 36 chr2 79346936 79346998 -173909585 - MLT1D LTR MaLR -3 502 445 3289 54 0 5 chr2 79346998 79347406 -173909177 - L1PA7 LINE L1 -3 6151 5746 861 226 93 36 chr2 79347406 79347782 -173908801 - MLT1D LTR MaLR -60 445 3 4869 25 2 0 chr2 79347863 79348430 -173908153 + L1PA4 LINE L1 5376 5943 -212 1611 161 0 4 chr2 79349915 79350157 -173906426 + AluJb SINE Alu 42 282 -30 2368 84 0 3 chr2 79350223 79350521 -173906062 + AluSx SINE Alu 5 301 -11 24 0 0 0 chr2 79350632 79350656 -173905927 + AT_rich Low_complexity Low_complexity 1 24 0 618 100 22 0 chr2 79351237 79351327 -173905256 + AluSg/x SINE Alu 204 295 -14 23 33 0 0 chr2 79351562 79351592 -173904991 + AT_rich Low_complexity Low_complexity 1 30 0 27 73 0 0 chr2 79351610 79351665 -173904918 + AT_rich Low_complexity Low_complexity 1 55 0 206 32 32 0 chr2 79351668 79351699 -173904884 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 1345 115 0 38 chr2 79351702 79351911 -173904672 - AluSg/x SINE Alu -30 282 82 3409 182 45 18 chr2 79352012 79352775 -173903808 + L1 LINE L1 3783 4565 -1581 2001 205 51 3 chr2 79352775 79353146 -173903437 + MSTB LTR MaLR 1 389 -37 246 157 0 20 chr2 79353146 79353197 -173903386 + L1 LINE L1 4564 4613 -1533 348 218 90 64 chr2 79353421 79353577 -173903006 + L1ME4a LINE L1 5920 6079 -42 3425 128 16 37 chr2 79354449 79354588 -173901995 - L1MA3 LINE L1 -43 6262 6122 226 0 0 56 chr2 79354588 79354624 -173901959 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2159 96 3 20 chr2 79354626 79354918 -173901665 - AluSp SINE Alu -26 287 1 3425 128 16 37 chr2 79354918 79355402 -173901181 - L1MA3 LINE L1 -184 6121 5649 1614 149 11 11 chr2 79355405 79355674 -173900909 + MER1B DNA MER1_type 3 271 -68 2285 255 99 11 chr2 79355774 79356569 -173900014 + L1MEc LINE L1 507 1371 -5025 1455 77 0 0 chr2 79356596 79356777 -173899806 + AluY SINE Alu 56 236 -75 240 196 11 65 chr2 79357034 79357126 -173899457 + (CATATA)n Simple_repeat Simple_repeat 4 90 0 235 279 73 28 chr2 79357280 79357459 -173899124 - L1M4 LINE L1 -797 5349 5163 1059 105 21 0 chr2 79357531 79357674 -173898909 - AluSq/x SINE Alu -167 146 1 4051 236 51 4 chr2 79357708 79358646 -173897937 + L1M1 LINE L1 16 997 -6568 8701 96 9 1 chr2 79358751 79360028 -173896555 + L1P LINE L1 2140 3427 -2719 2180 61 6 100 chr2 79360983 79361312 -173895271 - AluY SINE Alu -13 298 1 1002 241 23 4 chr2 79361984 79362250 -173894333 - L1MB4 LINE L1 -6 6174 5904 955 186 148 71 chr2 79362256 79362374 -173894209 + MLT1C LTR MaLR 1 109 -358 2210 81 0 65 chr2 79362374 79362695 -173893888 + AluSg SINE Alu 1 300 -10 955 186 148 71 chr2 79362695 79362942 -173893641 + MLT1C LTR MaLR 109 394 -73 496 236 104 14 chr2 79363206 79363350 -173893233 - L2 LINE L2 -2 3311 3155 9519 148 68 28 chr2 79363360 79365548 -173891035 + L1P3 LINE L1 12 2309 -4152 535 306 128 0 chr2 79366381 79366616 -173889967 - MLT1I LTR MaLR -58 351 87 304 380 36 22 chr2 79367222 79367446 -173889137 + MLT1K LTR MaLR 2 228 -360 385 344 69 0 chr2 79367927 79368087 -173888496 + MIR3 SINE MIR 33 203 -5 296 222 120 26 chr2 79368537 79368654 -173887929 - MER94 DNA DNA -6 128 1 364 257 114 29 chr2 79369304 79369444 -173887139 + MER5A DNA MER1_type 20 171 -18 6414 30 0 1 chr2 79370294 79371050 -173885533 + L1PA4 LINE L1 5401 6155 0 9135 132 16 13 chr2 79371050 79372604 -173883979 + L1P LINE L1 2365 3925 -2221 202 62 62 0 chr2 79372704 79372736 -173883847 + (TATAA)n Simple_repeat Simple_repeat 3 36 0 406 59 112 13 chr2 79372736 79373050 -173883533 + (TA)n Simple_repeat Simple_repeat 1 345 0 25 51 0 0 chr2 79373050 79373089 -173883494 + AT_rich Low_complexity Low_complexity 1 39 0 293 76 96 25 chr2 79373090 79373247 -173883336 + (TA)n Simple_repeat Simple_repeat 1 168 0 22 0 0 0 chr2 79373261 79373283 -173883300 + AT_rich Low_complexity Low_complexity 1 22 0 230 109 102 7 chr2 79373289 79373436 -173883147 + (TA)n Simple_repeat Simple_repeat 1 161 0 1839 208 33 12 chr2 79373436 79373918 -173882665 - L1 LINE L1 -2586 3560 3069 2807 225 40 26 chr2 79373922 79374700 -173881883 + L1 LINE L1 2230 3018 -3128 500 195 23 34 chr2 79376646 79376810 -173879773 + L1ME4a LINE L1 1176 6103 -11 21 0 0 31 chr2 79377582 79377596 -173878987 + AT_rich Low_complexity Low_complexity 1 14 -17 2097 122 3 3 chr2 79377596 79377891 -173878692 + AluSx SINE Alu 1 295 -17 21 0 0 31 chr2 79377891 79377908 -173878675 + AT_rich Low_complexity Low_complexity 14 31 0 367 319 24 42 chr2 79378076 79378242 -173878341 + MIR3 SINE MIR 14 176 -32 187 365 144 0 chr2 79380074 79380178 -173876405 - MIR SINE MIR -123 139 21 298 275 125 8 chr2 79382649 79382769 -173873814 + MER94 DNA DNA 1 134 0 219 103 0 0 chr2 79382991 79383030 -173873553 + (CA)n Simple_repeat Simple_repeat 2 40 0 185 305 246 0 chr2 79385091 79385209 -173871374 + MIR SINE MIR 102 248 -14 340 295 47 8 chr2 79385276 79385405 -173871178 + MIR SINE MIR 108 241 -21 578 226 56 139 chr2 79385746 79385860 -173870723 - MER110 LTR ERV1 0 491 369 2333 189 17 19 chr2 79385860 79386321 -173870262 - MER74C LTR ERVL 0 460 1 578 226 56 139 chr2 79386321 79386529 -173870054 - MER110 LTR ERV1 -122 369 196 769 211 75 28 chr2 79387963 79388176 -173868407 + MER58A DNA MER1_type 2 224 0 257 354 92 18 chr2 79388351 79388580 -173868003 - L2 LINE L2 -847 2467 2222 573 239 100 127 chr2 79390074 79390555 -173866028 - MLT1J LTR MaLR -41 470 3 2107 130 7 0 chr2 79390822 79391122 -173865461 - AluSp SINE Alu -8 305 4 819 139 20 7 chr2 79391365 79391516 -173865067 - L1MC3 LINE L1 0 8203 8051 1268 204 201 0 chr2 79391522 79391840 -173864743 - L1MC3 LINE L1 -283 7920 7539 531 246 11 16 chr2 79391844 79392027 -173864556 + L1PA16 LINE L1 2750 2931 -3215 27 0 0 0 chr2 79392313 79392340 -173864243 + AT_rich Low_complexity Low_complexity 1 27 0 44070 40 3 1 chr2 79392340 79398477 -173858106 - L1PA3 LINE L1 -3 6152 2 9311 197 23 29 chr2 79398478 79399145 -173857438 + L1PA16 LINE L1 2920 3589 -2577 1564 154 111 52 chr2 79399145 79399489 -173857094 - THE1B LTR MaLR 0 364 1 9311 197 23 29 chr2 79399489 79399501 -173857082 + L1PA16 LINE L1 3589 3600 -2566 11360 111 2 4 chr2 79399501 79401084 -173855499 - THE1B-int LTR MaLR 0 1580 1 1806 151 62 42 chr2 79401084 79401441 -173855142 - THE1B LTR MaLR 0 364 1 9311 197 23 29 chr2 79401441 79404020 -173852563 + L1PA16 LINE L1 3598 6164 -2 2947 235 108 22 chr2 79404077 79405945 -173850638 - L1MC3 LINE L1 -743 5821 4677 2267 140 5 3 chr2 79405949 79406327 -173850256 - L1P LINE L1 -1173 4973 4595 896 240 77 40 chr2 79406328 79406502 -173850081 - L1MC3 LINE L1 -3642 2922 2756 3182 100 32 0 chr2 79406502 79406941 -173849642 + MLT2A2 LTR ERVL 1 453 0 896 240 77 40 chr2 79406941 79407276 -173849307 - L1MC3 LINE L1 -3808 2756 2435 207 0 0 0 chr2 79407679 79407702 -173848881 + (CA)n Simple_repeat Simple_repeat 2 24 0 3715 228 92 28 chr2 79409061 79410803 -173845780 - L1MC3 LINE L1 -4290 2274 441 1657 178 9 47 chr2 79410803 79411124 -173845459 - AluJo SINE Alu -1 311 3 3715 228 92 28 chr2 79411124 79411514 -173845069 - L1MC3 LINE L1 -6123 441 77 1334 225 49 43 chr2 79412134 79412673 -173843910 - MLT1E LTR MaLR 0 593 8 28 0 0 0 chr2 79413981 79414009 -173842574 + AT_rich Low_complexity Low_complexity 1 28 0 474 278 61 0 chr2 79414448 79414563 -173842020 + MIR SINE MIR 22 143 -119 2017 141 7 3 chr2 79414673 79414978 -173841605 - AluSx SINE Alu -6 306 1 552 262 60 100 chr2 79415127 79415352 -173841231 + LTR33 LTR ERVL 3 249 -272 783 269 18 0 chr2 79415359 79415526 -173841057 - MER5A DNA MER1_type 0 189 20 378 286 95 53 chr2 79415586 79415629 -173840954 + LTR33 LTR ERVL 227 267 -254 2155 105 3 0 chr2 79415629 79415915 -173840668 - AluSq SINE Alu -26 287 1 378 286 95 53 chr2 79415915 79416154 -173840429 + LTR33 LTR ERVL 267 521 0 22 0 0 0 chr2 79417466 79417488 -173839095 + AT_rich Low_complexity Low_complexity 1 22 0 387 350 73 33 chr2 79417602 79417931 -173838652 - L1 LINE L1 -3388 2758 2417 517 287 77 26 chr2 79417959 79418154 -173838429 + L2 LINE L2 2478 2682 -632 348 64 0 0 chr2 79418735 79418782 -173837801 + (TG)n Simple_repeat Simple_repeat 2 48 0 370 357 63 4 chr2 79418933 79419171 -173837412 - L2 LINE L2 -9 3304 3053 5998 102 17 3 chr2 79419231 79420583 -173836000 + L1PA14 LINE L1 4794 6160 -1 394 139 83 0 chr2 79421306 79421378 -173835205 - MER103 DNA DNA -82 84 7 1398 244 9 36 chr2 79422140 79422384 -173834199 - MLT1E3 LTR MaLR 0 624 349 1964 141 38 24 chr2 79422384 79422754 -173833829 + THE1C LTR MaLR 1 375 0 1398 244 9 36 chr2 79422754 79422901 -173833682 - MLT1E3 LTR MaLR -275 349 200 236 270 90 22 chr2 79422927 79423016 -173833567 - MLT1E3 LTR MaLR -516 138 44 22 0 0 0 chr2 79423681 79423703 -173832880 + AT_rich Low_complexity Low_complexity 1 22 0 1829 194 27 0 chr2 79424125 79424460 -173832123 - MER7A DNA MER2_type -1 345 4 32 43 0 0 chr2 79425627 79425673 -173830910 + AT_rich Low_complexity Low_complexity 1 46 0 418 273 75 39 chr2 79426471 79426882 -173829701 + HAL1 LINE L1 852 1277 -1230 541 313 67 55 chr2 79426891 79427402 -173829181 + L1M4 LINE L1 4751 5267 -879 308 298 19 13 chr2 79427473 79427670 -173828913 + L1P1 LINE L1 5355 5556 -599 32 43 0 0 chr2 79427691 79427737 -173828846 + AT_rich Low_complexity Low_complexity 1 46 0 6955 43 0 8 chr2 79428611 79429464 -173827119 - L1PA5 LINE L1 -1 6153 5308 7907 28 0 1 chr2 79429464 79430414 -173826169 + L1PA5 LINE L1 4354 5302 -844 27 29 0 0 chr2 79430613 79430647 -173825936 + AT_rich Low_complexity Low_complexity 1 34 0 209 333 0 0 chr2 79431110 79431179 -173825404 + MIR SINE MIR 101 169 -93 207 0 0 0 chr2 79431180 79431203 -173825380 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1741 181 27 6 chr2 79431217 79431553 -173825030 - LTR24B LTR ERV1 -50 526 184 331 92 0 123 chr2 79431557 79431622 -173824961 + Alu SINE Alu 237 293 -9 * 718 164 79 33 chr2 79431613 79431814 -173824769 - LTR24B LTR ERV1 -385 191 1 2051 130 3 13 chr2 79431882 79432181 -173824402 - AluSq SINE Alu -15 298 3 25 31 0 0 chr2 79433089 79433121 -173823462 + AT_rich Low_complexity Low_complexity 1 32 0 417 274 34 14 chr2 79433123 79433269 -173823314 - L1ME3A LINE L1 -34 6136 5988 1114 226 77 85 chr2 79433270 79433774 -173822809 - MLT1D LTR MaLR -5 500 1 1371 293 71 21 chr2 79433774 79434188 -173822395 - L1ME3A LINE L1 -187 5983 5591 7663 29 0 0 chr2 79434188 79435462 -173821121 - L1PA3 LINE L1 -1 6154 4881 1371 293 71 21 chr2 79435462 79435982 -173820601 - L1ME3A LINE L1 -579 5591 5003 21 36 0 0 chr2 79436024 79436052 -173820531 + AT_rich Low_complexity Low_complexity 1 28 0 316 323 18 12 chr2 79436052 79436216 -173820367 - L1ME3A LINE L1 -1331 4815 4651 13196 97 5 2 chr2 79436273 79438919 -173817664 - L1PA7 LINE L1 0 6469 3815 12405 119 19 58 chr2 79438925 79441878 -173814705 - L1PA7 LINE L1 -3448 3013 2 601 320 29 20 chr2 79442023 79442267 -173814316 + L2 LINE L2 1910 2155 -1159 594 240 59 7 chr2 79442359 79442532 -173814051 + L1ME LINE L1 5381 5551 -613 226 180 16 33 chr2 79442554 79442615 -173813968 - L1MEd LINE L1 -4969 1573 1514 308 284 126 93 chr2 79442620 79443105 -173813478 - L1MEd LINE L1 -5018 1616 1116 1635 151 0 0 chr2 79443270 79443521 -173813062 - AluSx SINE Alu -31 281 31 276 247 67 40 chr2 79444112 79444262 -173812321 - L1ME4a LINE L1 -199 5922 5769 22 0 0 0 chr2 79445111 79445133 -173811450 + AT_rich Low_complexity Low_complexity 1 22 0 294 314 88 25 chr2 79445649 79445808 -173810775 + L1ME LINE L1 5486 5654 -467 212 172 35 17 chr2 79446143 79446201 -173810382 + (TAA)n Simple_repeat Simple_repeat 2 60 0 1724 199 0 3 chr2 79446206 79446507 -173810076 - AluJb SINE Alu -12 300 1 395 310 48 14 chr2 79446559 79446704 -173809879 - MIR SINE MIR -66 196 47 870 339 86 24 chr2 79446784 79447495 -173809088 - L2 LINE L2 -1099 2215 1461 3300 189 27 32 chr2 79447955 79448937 -173807646 + L1MB8 LINE L1 4593 5566 -618 2179 228 39 22 chr2 79449125 79449713 -173806870 + L1MB8 LINE L1 5565 6162 -16 23 33 0 0 chr2 79450297 79450327 -173806256 + AT_rich Low_complexity Low_complexity 1 30 0 286 340 119 32 chr2 79451440 79451693 -173804890 + L2 LINE L2 2574 2848 -466 270 353 110 5 chr2 79451712 79451930 -173804653 + MIR SINE MIR 10 250 -12 25 31 0 0 chr2 79452228 79452260 -173804323 + AT_rich Low_complexity Low_complexity 1 32 0 538 286 35 63 chr2 79453692 79453947 -173802636 - ERVL LTR ERVL -1104 4660 4413 320 275 107 45 chr2 79455128 79455342 -173801241 + HAL1b LINE L1 492 669 -679 738 246 47 5 chr2 79455351 79455542 -173801041 + MER58A DNA MER1_type 2 200 -24 21 36 0 0 chr2 79455746 79455774 -173800809 + AT_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr2 79455880 79455900 -173800683 + (T)n Simple_repeat Simple_repeat 1 20 0 227 170 21 53 chr2 79455997 79456073 -173800510 + (TCTA)n Simple_repeat Simple_repeat 1 75 -16 2339 76 3 0 chr2 79456073 79456363 -173800220 - AluY SINE Alu -20 291 1 227 170 21 53 chr2 79456363 79456380 -173800203 + (TCTA)n Simple_repeat Simple_repeat 75 91 0 277 328 137 38 chr2 79456505 79456688 -173799895 - MIR SINE MIR -26 236 36 326 285 49 32 chr2 79456728 79456851 -173799732 - MIR3 SINE MIR -46 162 38 986 267 5 0 chr2 79457500 79457710 -173798873 + MER58A DNA MER1_type 1 211 -13 185 157 176 20 chr2 79460273 79460324 -173796259 - MER5A DNA MER1_type -122 67 9 291 338 36 22 chr2 79461093 79461232 -173795351 - MIR SINE MIR -120 142 2 238 294 111 48 chr2 79461285 79461345 -173795238 + MER5A DNA MER1_type 56 111 -78 2052 96 0 4 chr2 79461345 79461615 -173794968 - AluSx SINE Alu -9 303 35 238 294 111 48 chr2 79461615 79461680 -173794903 + MER5A DNA MER1_type 111 189 0 252 296 31 51 chr2 79461710 79461808 -173794775 - MIR SINE MIR -53 209 114 1632 162 14 14 chr2 79462028 79462318 -173794265 + AluJb SINE Alu 6 295 -17 226 350 78 0 chr2 79462352 79462455 -173794128 + MIR SINE MIR 106 216 -46 684 340 94 34 chr2 79462876 79463549 -173793034 + L2 LINE L2 2161 2873 -441 250 280 120 24 chr2 79463794 79463919 -173792664 + L2 LINE L2 3172 3308 -5 2282 82 0 20 chr2 79464039 79464343 -173792240 + AluSg SINE Alu 2 299 -11 329 345 102 1 chr2 79464687 79464860 -173791723 + MIR SINE MIR 10 198 -64 1815 284 63 48 chr2 79465073 79466420 -173790163 - L1ME3A LINE L1 -15 6138 4764 25 31 0 0 chr2 79466447 79466479 -173790104 + AT_rich Low_complexity Low_complexity 1 32 0 610 243 90 8 chr2 79466743 79467010 -173789573 - L1ME3A LINE L1 -1426 4703 4415 * 875 294 62 29 chr2 79467007 79467107 -173789476 - L1ME3A LINE L1 -3317 2812 2717 2339 73 0 13 chr2 79467107 79467420 -173789163 + AluY SINE Alu 1 309 -2 875 294 62 29 chr2 79467420 79467903 -173788680 - L1ME3A LINE L1 -3412 2717 2210 1337 279 70 49 chr2 79467904 79468564 -173788019 + MLT1E2 LTR MaLR 1 626 0 257 282 108 63 chr2 79468621 79469596 -173786987 - L1MEd LINE L1 -4115 2195 1126 455 174 47 0 chr2 79469612 79469761 -173786822 + (TA)n Simple_repeat Simple_repeat 2 157 0 322 267 69 61 chr2 79469904 79470166 -173786417 - L1MEd LINE L1 -5281 838 575 189 339 0 0 chr2 79470745 79470810 -173785773 - MIR SINE MIR -75 133 69 237 274 0 0 chr2 79471441 79471492 -173785091 + (TG)n Simple_repeat Simple_repeat 2 52 0 219 263 13 66 chr2 79471573 79471649 -173784934 - L3b LINE CR1 -66 1517 1446 1825 186 24 6 chr2 79471670 79472009 -173784574 + MLT1A1 LTR MaLR 1 345 -20 519 333 86 31 chr2 79472272 79472596 -173783987 - MLT1I LTR MaLR -9 400 59 635 237 144 0 chr2 79472990 79473129 -173783454 - MER45A DNA AcHobo -19 159 1 14304 126 12 18 chr2 79473246 79476405 -173780178 - L1PA8A LINE L1 -3 6128 2985 1762 197 39 21 chr2 79476607 79476988 -173779595 - MLT1C LTR MaLR 0 467 80 1430 228 10 13 chr2 79477008 79477320 -173779263 + MLT1A2 LTR MaLR 63 373 -1 3420 205 24 0 chr2 79477414 79478155 -173778428 + L1MB7 LINE L1 5426 6184 0 3500 163 23 27 chr2 79478187 79478827 -173777756 - L1MA6 LINE L1 0 7719 7077 6804 114 13 21 chr2 79478827 79479907 -173776676 - MER11C LTR ERVK 0 1071 1 3500 163 23 27 chr2 79479907 79480890 -173775693 - L1MA6 LINE L1 -642 7077 6099 3120 256 52 35 chr2 79480870 79482374 -173774209 - L1MA6 LINE L1 -4044 3521 2208 * 504 381 45 30 chr2 79482718 79483188 -173773395 - L1MA6 LINE L1 -5804 1692 1216 768 305 60 55 chr2 79483205 79483605 -173772978 - MLT1I LTR MaLR -2 407 6 298 278 71 24 chr2 79483768 79483894 -173772689 - MLT1I LTR MaLR -259 150 19 612 286 42 32 chr2 79483906 79484123 -173772460 - MIR SINE MIR -24 238 20 201 94 0 0 chr2 79485558 79485590 -173770993 + (TA)n Simple_repeat Simple_repeat 1 32 0 584 263 63 6 chr2 79485741 79485916 -173770667 + MER5A DNA MER1_type 5 189 0 2159 115 0 0 chr2 79485921 79486216 -173770367 + AluSc SINE Alu 1 295 -14 740 316 85 20 chr2 79486453 79486957 -173769626 - HAL1 LINE L1 -1594 913 377 21 0 0 0 chr2 79487033 79487054 -173769529 + AT_rich Low_complexity Low_complexity 1 21 0 28 29 0 0 chr2 79488583 79488618 -173767965 + AT_rich Low_complexity Low_complexity 1 35 0 364 157 0 12 chr2 79489532 79489615 -173766968 + L1MA7 LINE L1 6205 6286 -5 799 223 29 0 chr2 79491354 79491529 -173765054 + MER58A DNA MER1_type 45 224 0 1847 206 15 76 chr2 79491638 79491947 -173764636 - MLT1D LTR MaLR -13 492 226 2461 55 3 10 chr2 79491947 79492256 -173764327 - AluY SINE Alu -4 307 1 1847 206 15 76 chr2 79492256 79492470 -173764113 - MLT1D LTR MaLR -279 226 1 711 190 33 22 chr2 79496667 79496851 -173759732 - MER53 DNA DNA 0 189 4 302 385 6 6 chr2 79496976 79497132 -173759451 - L1M4 LINE L1 -1908 4238 4083 21 0 0 0 chr2 79498076 79498097 -173758486 + AT_rich Low_complexity Low_complexity 1 21 0 216 0 0 0 chr2 79498544 79498568 -173758015 + (GA)n Simple_repeat Simple_repeat 1 24 0 1384 181 151 80 chr2 79498996 79499459 -173757124 + MLT1F1 LTR MaLR 4 499 -68 626 285 87 51 chr2 79499531 79499920 -173756663 - MLT1L LTR MaLR -64 551 149 459 324 95 22 chr2 79501311 79501805 -173754778 + L1M4 LINE L1 2789 3318 -2828 333 320 89 22 chr2 79502123 79502348 -173754235 + L1M4 LINE L1 3739 3978 -2168 234 192 0 19 chr2 79503806 79503858 -173752725 + L1MC4 LINE L1 6652 6702 -1340 29 28 0 0 chr2 79503934 79503970 -173752613 + AT_rich Low_complexity Low_complexity 1 36 0 277 159 0 0 chr2 79504474 79504518 -173752065 - MLT2B2 LTR ERVL -8 546 503 1663 176 16 181 chr2 79504550 79505112 -173751471 - MLT2B2 LTR ERVL -44 471 3 312 175 48 0 chr2 79505596 79505659 -173750924 - L1MC1 LINE L1 -234 6099 6034 1778 186 64 6 chr2 79505944 79506289 -173750294 + MLT1A1 LTR MaLR 1 365 0 212 86 29 0 chr2 79506322 79506357 -173750226 + (TG)n Simple_repeat Simple_repeat 2 37 0 259 232 53 21 chr2 79506448 79506543 -173750040 - L1ME2 LINE L1 -4 6160 6063 224 94 0 0 chr2 79506544 79506576 -173750007 + MIR SINE MIR 122 153 -109 547 214 60 121 chr2 79506576 79506947 -173749636 - L1ME2 LINE L1 -102 6068 5743 335 243 80 106 chr2 79506960 79507261 -173749322 - L1ME2 LINE L1 -518 5603 5311 231 204 0 0 chr2 79507297 79507351 -173749232 + L1MC4 LINE L1 6652 6705 -1337 363 255 0 0 chr2 79507352 79507458 -173749125 + (TA)n Simple_repeat Simple_repeat 1 106 0 963 269 4 18 chr2 79507791 79508018 -173748565 - MIR SINE MIR -32 230 7 238 233 17 0 chr2 79508299 79508359 -173748224 - MLT1I LTR MaLR -23 386 326 442 341 18 18 chr2 79508863 79509080 -173747503 + L2 LINE L2 2701 2917 -397 725 202 66 22 chr2 79509080 79509308 -173747275 - LTR37B LTR ERV1 -1 467 230 6668 63 14 21 chr2 79509399 79510553 -173746030 - L1PA8 LINE L1 -8 6164 5003 216 0 0 0 chr2 79510553 79510577 -173746006 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1848 151 7 0 chr2 79510577 79510855 -173745728 - AluSc SINE Alu -29 280 1 6668 63 14 21 chr2 79510855 79511122 -173745461 - L1PA8 LINE L1 -1167 5005 4747 463 321 59 5 chr2 79511261 79511448 -173745135 - HERV16 LTR ERVL -4797 199 3 302 323 39 19 chr2 79511461 79511616 -173744967 - LTR16C LTR ERVL 0 491 334 205 348 43 26 chr2 79512133 79512248 -173744335 - MIR SINE MIR -57 205 89 1853 189 56 46 chr2 79512261 79512722 -173743861 + MER31B LTR ERV1 1 466 0 764 247 11 0 chr2 79514093 79514279 -173742304 - L1MD3 LINE L1 -58 7937 7750 386 319 132 54 chr2 79514526 79514936 -173741647 - LTR16C LTR ERVL -2 489 48 6118 125 22 4 chr2 79514938 79516116 -173740467 + L1PB1 LINE L1 4949 6150 -1 33 0 0 0 chr2 79516116 79516149 -173740434 + AT_rich Low_complexity Low_complexity 1 33 0 1833 181 60 66 chr2 79516160 79516657 -173739926 - MER67C LTR ERV1 -216 494 1 364 239 62 18 chr2 79517550 79517663 -173738920 - MIR3 SINE MIR -4 204 87 326 285 120 50 chr2 79518901 79519143 -173737440 + L1MC4a LINE L1 5668 5926 -1882 272 127 18 0 chr2 79519174 79519229 -173737354 + (TG)n Simple_repeat Simple_repeat 2 57 0 252 264 0 0 chr2 79519272 79519325 -173737258 - L2 LINE L2 -5 3308 3256 237 288 99 27 chr2 79519356 79519467 -173737116 - L2 LINE L2 -1052 2262 2144 2483 49 3 0 chr2 79521311 79521615 -173734968 - AluY SINE Alu -6 305 1 23 0 0 0 chr2 79521658 79521681 -173734902 + AT_rich Low_complexity Low_complexity 1 23 0 7687 22 0 0 chr2 79521863 79522765 -173733818 - L1PA3 LINE L1 0 6155 5254 1657 218 53 12 chr2 79523051 79523482 -173733101 + L1MB4 LINE L1 5732 6180 0 2328 107 0 0 chr2 79523546 79523855 -173732728 + AluSx SINE Alu 1 309 -3 1899 114 14 3 chr2 79524370 79524667 -173731916 - AluY SINE Alu -8 303 4 279 283 18 18 chr2 79524972 79525085 -173731498 + G-rich Low_complexity Low_complexity 2 114 0 9947 81 9 1 chr2 79525125 79526516 -173730067 + L1P LINE L1 2972 4374 -1772 2722 284 92 44 chr2 79526677 79527421 -173729162 - HAL1 LINE L1 -152 2355 1648 7358 32 0 0 chr2 79527421 79528873 -173727710 - L1PA4 LINE L1 -7 6148 4698 2722 284 92 44 chr2 79528873 79529808 -173726775 - HAL1 LINE L1 -859 1648 595 897 178 83 22 chr2 79529865 79530095 -173726488 - MER63 DNA MER1_type -609 321 78 336 313 78 0 chr2 79530160 79530288 -173726295 - HAL1 LINE L1 -1960 547 410 528 281 55 21 chr2 79530358 79530596 -173725987 - HAL1 LINE L1 -2261 246 1 355 257 115 102 chr2 79530675 79531076 -173725507 - L1M4 LINE L1 -1355 4791 4386 210 158 0 0 chr2 79531251 79531289 -173725294 + (CAAA)n Simple_repeat Simple_repeat 3 40 0 738 204 58 24 chr2 79531314 79531502 -173725081 + MER66B LTR ERV1 188 423 -131 3049 207 28 30 chr2 79531572 79531965 -173724618 + L1 LINE L1 2933 3325 -2821 1917 112 87 0 chr2 79531965 79532252 -173724331 + AluSx SINE Alu 1 312 0 3049 207 28 30 chr2 79532252 79532718 -173723865 + L1 LINE L1 3325 3790 -2356 326 143 0 0 chr2 79532718 79532767 -173723816 + Alu SINE Alu 1 49 -252 1158 265 106 66 chr2 79533375 79534052 -173722531 - L1M4 LINE L1 -1067 5079 4431 201 39 0 0 chr2 79534052 79534078 -173722505 + (TA)n Simple_repeat Simple_repeat 1 26 0 1158 265 106 66 chr2 79534078 79534878 -173721705 - L1M4 LINE L1 -1715 4431 3542 1137 162 0 96 chr2 79534950 79535221 -173721362 - L1MB8 LINE L1 -6 6172 5928 12818 223 51 31 chr2 79535227 79536861 -173719722 - L1MA6 LINE L1 -238 7481 5882 180 0 0 0 chr2 79536861 79536881 -173719702 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 12818 223 51 31 chr2 79536881 79536988 -173719595 - L1MA6 LINE L1 -1837 5882 5779 274 80 40 0 chr2 79536988 79537038 -173719545 + (TA)n Simple_repeat Simple_repeat 2 53 0 12818 223 51 31 chr2 79537038 79537344 -173719239 - L1MA6 LINE L1 -1940 5779 5481 2089 100 4 0 chr2 79537344 79537614 -173718969 + AluSg SINE Alu 22 292 -18 12818 223 51 31 chr2 79537614 79537780 -173718803 - L1MA6 LINE L1 -2238 5481 5320 2247 87 3 0 chr2 79537780 79538066 -173718517 - AluSc SINE Alu -22 287 1 12818 223 51 31 chr2 79538066 79538547 -173718036 - L1MA6 LINE L1 -2399 5320 4850 2293 113 7 0 chr2 79538547 79538857 -173717726 - AluSx SINE Alu 0 312 1 12818 223 51 31 chr2 79538857 79540274 -173716309 - L1MA6 LINE L1 -2869 4850 3464 234 0 0 0 chr2 79540274 79540300 -173716283 + (CA)n Simple_repeat Simple_repeat 2 27 0 12818 223 51 31 chr2 79540300 79540714 -173715869 - L1MA6 LINE L1 -4255 3464 3060 1969 145 10 0 chr2 79540714 79541017 -173715566 - AluSq SINE Alu -7 306 1 277 89 22 0 chr2 79541022 79541067 -173715516 + MADE1 DNA Mariner 35 80 0 12818 223 51 31 chr2 79541067 79541624 -173714959 - L1MA6 LINE L1 -4662 3057 1889 1422 326 20 25 chr2 79541656 79542208 -173714375 - L1MA6 LINE L1 -6475 1014 466 496 271 71 80 chr2 79542505 79542944 -173713639 - L1M4 LINE L1 -2991 3155 2721 24 32 0 0 chr2 79543679 79543710 -173712873 + AT_rich Low_complexity Low_complexity 1 31 0 339 250 65 0 chr2 79544075 79544167 -173712416 + MLT1I LTR MaLR 307 404 -5 1007 269 11 0 chr2 79544671 79544939 -173711644 + L1M2b LINE L1 33 303 -6906 422 150 12 0 chr2 79544941 79545021 -173711562 + L1MA5A LINE L1 6214 6294 -3 828 245 69 0 chr2 79545170 79545403 -173711180 - Charlie1 DNA MER1_type -306 2455 2207 503 231 10 0 chr2 79545400 79545504 -173711079 - Charlie1 DNA MER1_type -2621 140 36 * 11135 204 45 14 chr2 79545579 79549350 -173707233 - L1MA5 LINE L1 0 6942 3058 292 240 13 27 chr2 79549350 79549425 -173707158 - AluJ/FRAM SINE Alu -1 301 228 1711 207 65 2 chr2 79549425 79549826 -173706757 - L1MA5 LINE L1 -4987 1802 1377 2401 246 73 43 chr2 79549829 79550569 -173706014 - L1MA5 LINE L1 -6017 772 11 240 293 24 12 chr2 79550605 79550687 -173705896 + MLT1J LTR MaLR 212 294 -217 1794 148 0 40 chr2 79550815 79551112 -173705471 + AluSx SINE Alu 3 287 -25 216 97 0 0 chr2 79551112 79551143 -173705440 + (TA)n Simple_repeat Simple_repeat 2 32 0 22 56 0 0 chr2 79551162 79551198 -173705385 + AT_rich Low_complexity Low_complexity 1 36 0 374 286 41 59 chr2 79552355 79552575 -173704008 + L1MC4 LINE L1 7826 8041 -1 1406 113 170 0 chr2 79552626 79552740 -173703843 + AluSx SINE Alu 1 94 -217 384 40 0 0 chr2 79552740 79552790 -173703793 + (CA)n Simple_repeat Simple_repeat 1 50 0 1406 113 170 0 chr2 79552790 79552944 -173703639 + AluSx SINE Alu 94 311 0 24 32 0 0 chr2 79553060 79553091 -173703492 + AT_rich Low_complexity Low_complexity 1 31 0 401 368 75 0 chr2 79553122 79553296 -173703287 - MIR SINE MIR -71 191 5 489 204 11 0 chr2 79553296 79553384 -173703199 - Tigger5 DNA MER2_type 0 2323 2235 368 173 13 27 chr2 79553432 79553507 -173703076 - Tigger5 DNA MER2_type 0 2323 2250 279 200 0 18 chr2 79553474 79553529 -173703054 - Tigger5 DNA MER2_type -2268 55 2 * 1183 205 84 62 chr2 79553586 79553942 -173702641 + MER92C LTR ERV1 189 552 -2 367 47 0 0 chr2 79554060 79554103 -173702480 + MLT2B2 LTR ERVL 397 439 -76 * 1857 179 91 38 chr2 79554100 79554520 -173702063 - MLT2B1 LTR ERVL -78 442 1 4081 172 40 28 chr2 79555916 79556157 -173700426 + L1MA9 LINE L1 5405 5642 -670 1116 153 44 10 chr2 79556157 79556360 -173700223 - MER6B DNA MER2_type 0 210 1 4081 172 40 28 chr2 79556360 79556510 -173700073 + L1MA9 LINE L1 5642 5789 -523 369 0 0 0 chr2 79556510 79556551 -173700032 + (CA)n Simple_repeat Simple_repeat 2 42 0 4081 172 40 28 chr2 79556551 79557055 -173699528 + L1MA9 LINE L1 5789 6312 0 332 330 57 9 chr2 79557253 79557480 -173699103 - L1MDa LINE L1 -4658 1471 1234 400 314 71 70 chr2 79557539 79558473 -173698110 - L1MDa LINE L1 -4910 1209 275 188 263 35 18 chr2 79558972 79559029 -173697554 + MER5A DNA MER1_type 130 187 -2 27 29 0 0 chr2 79559410 79559444 -173697139 + AT_rich Low_complexity Low_complexity 1 34 0 2863 243 7 2 chr2 79559557 79560124 -173696459 - MER70B LTR ERVL -8 570 1 22 0 0 0 chr2 79560387 79560409 -173696174 + AT_rich Low_complexity Low_complexity 1 22 0 317 314 96 0 chr2 79562091 79562279 -173694304 - L1M4 LINE L1 -1441 4705 4500 203 250 0 0 chr2 79562918 79562970 -173693613 + (TG)n Simple_repeat Simple_repeat 1 52 0 21 0 0 0 chr2 79563440 79563461 -173693122 + AT_rich Low_complexity Low_complexity 1 21 0 1089 224 152 30 chr2 79564679 79565219 -173691364 + LTR50 LTR ERVL 1 793 -2 446 304 90 29 chr2 79566180 79566693 -173689890 - L1ME4a LINE L1 -76 6045 5502 221 300 50 38 chr2 79567792 79567872 -173688711 - L2 LINE L2 -1 3312 3232 911 307 178 35 chr2 79567887 79569016 -173687567 - L2 LINE L2 -185 3087 1680 2467 104 13 16 chr2 79569016 79569392 -173687191 - THE1C LTR MaLR 0 375 1 911 307 178 35 chr2 79569392 79569816 -173686767 - L2 LINE L2 -1592 1680 1318 22 35 0 0 chr2 79569885 79569914 -173686669 + AT_rich Low_complexity Low_complexity 1 29 0 1128 206 50 60 chr2 79570432 79570733 -173685850 + AluJo SINE Alu 3 300 -2 240 365 9 19 chr2 79571109 79571216 -173685367 - MIR3 SINE MIR -16 192 87 188 167 28 0 chr2 79571252 79571288 -173685295 + L2 LINE L2 3268 3304 -9 204 289 237 0 chr2 79572563 79572660 -173683923 + MER5A DNA MER1_type 7 126 -63 2551 159 14 2 chr2 79573012 79573439 -173683144 + MSTB1 LTR MaLR 1 432 0 1347 223 19 35 chr2 79573785 79574152 -173682431 - MLT1A1 LTR MaLR 0 365 5 412 347 144 7 chr2 79574496 79574767 -173681816 - MLT1L LTR MaLR 0 615 308 195 42 0 0 chr2 79574891 79574915 -173681668 + (TG)n Simple_repeat Simple_repeat 2 25 0 1329 240 79 52 chr2 79574916 79575411 -173681172 + MER74B LTR ERVL 75 582 -40 293 277 138 19 chr2 79575640 79575799 -173680784 + MER104 DNA Tc2 1 178 -2 234 227 182 0 chr2 79576208 79576274 -173680309 + LTR33A LTR ERVL 446 523 0 800 276 62 25 chr2 79576462 79576737 -173679846 + MLT1G LTR MaLR 292 576 -14 228 184 0 0 chr2 79579863 79579912 -173676671 + GA-rich Low_complexity Low_complexity 3 51 0 465 280 119 0 chr2 79582625 79582768 -173673815 - MIR SINE MIR -29 233 74 545 303 16 33 chr2 79584415 79584643 -173671940 + MIR SINE MIR 18 243 -19 407 229 41 57 chr2 79584886 79585008 -173671575 + MIR SINE MIR 35 154 -108 236 340 34 14 chr2 79585029 79585176 -173671407 - MIR SINE MIR -8 254 105 195 42 0 0 chr2 79587280 79587304 -173669279 + (CTAAT)n Simple_repeat Simple_repeat 1 24 0 361 367 29 0 chr2 79588094 79588233 -173668350 + MIR SINE MIR 20 162 -100 1276 262 58 45 chr2 79588238 79588684 -173667899 + LTR16A1 LTR ERVL 6 457 0 1725 222 58 22 chr2 79589490 79589936 -173666647 + MLT1C LTR MaLR 6 467 0 361 359 138 27 chr2 79589939 79590237 -173666346 + L2 LINE L2 2940 3270 -2 195 42 0 0 chr2 79591235 79591259 -173665324 + (CA)n Simple_repeat Simple_repeat 2 25 0 551 167 0 49 chr2 79592027 79592129 -173664454 - AluJb SINE Alu -185 127 31 1691 144 0 93 chr2 79592135 79592468 -173664115 - AluJb SINE Alu 0 302 1 2300 188 30 9 chr2 79592855 79593292 -173663291 - MLT1C LTR MaLR -6 461 16 204 219 0 0 chr2 79594400 79594441 -173662142 - L2 LINE L2 -46 3226 3186 620 205 57 0 chr2 79594458 79594580 -173662003 - MER58B DNA MER1_type 0 341 213 10500 147 33 20 chr2 79594580 79596417 -173660166 - Tigger1 DNA MER2_type 0 2418 558 23 54 0 0 chr2 79596466 79596503 -173660080 + AT_rich Low_complexity Low_complexity 1 37 0 2116 152 12 0 chr2 79596511 79596839 -173659744 - Tigger1 DNA MER2_type -1858 560 229 1423 180 3 35 chr2 79596844 79597127 -173659456 + AluJo SINE Alu 6 279 -33 953 189 25 10 chr2 79597127 79597328 -173659255 - Tigger1 DNA MER2_type -2213 205 2 477 220 173 7 chr2 79597329 79597479 -173659104 - MER58B DNA MER1_type -127 214 40 456 220 262 0 chr2 79598090 79598230 -173658353 + MER45A DNA AcHobo 8 178 0 429 70 0 0 chr2 79598742 79598799 -173657784 + (TGGA)n Simple_repeat Simple_repeat 1 57 0 378 268 96 32 chr2 79599571 79599728 -173656855 - MER5A DNA MER1_type -8 181 15 180 135 0 0 chr2 79599803 79599840 -173656743 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 219 300 29 36 chr2 79599845 79599950 -173656633 + MER5A DNA MER1_type 66 162 -16 182 324 57 29 chr2 79600802 79600907 -173655676 - MIR SINE MIR -61 147 40 380 298 41 8 chr2 79601260 79601381 -173655202 - L2 LINE L2 -2 3311 3187 411 21 0 0 chr2 79601981 79602029 -173654554 + (CA)n Simple_repeat Simple_repeat 1 48 0 8021 13 0 0 chr2 79602367 79603941 -173652642 - L1HS LINE L1 -2 6153 4580 6903 21 0 0 chr2 79603938 79604742 -173651841 + L1HS LINE L1 3808 4611 -1535 * 26 0 0 0 chr2 79604762 79604788 -173651795 + AT_rich Low_complexity Low_complexity 1 26 0 971 298 98 22 chr2 79604850 79605250 -173651333 + LTR16A LTR ERVL 21 450 0 1987 126 7 3 chr2 79605396 79605682 -173650901 - AluSx SINE Alu -18 294 8 239 291 91 18 chr2 79607109 79607219 -173649364 + MIR SINE MIR 86 203 -59 454 273 43 31 chr2 79607476 79607637 -173648946 - MIR SINE MIR -42 220 58 2485 54 0 3 chr2 79607851 79608147 -173648436 + AluY SINE Alu 1 295 -16 704 224 52 55 chr2 79608417 79608501 -173648082 + L1MC5 LINE L1 7291 7374 -587 2160 117 37 40 chr2 79608501 79608877 -173647706 - THE1C LTR MaLR 0 375 1 704 224 52 55 chr2 79608877 79609064 -173647519 + L1MC5 LINE L1 7374 7561 -400 2053 164 117 34 chr2 79609463 79609934 -173646649 - L1MCa LINE L1 -4035 2391 1870 1858 154 0 6 chr2 79609934 79610258 -173646325 - L1MB1 LINE L1 0 6168 5847 2053 164 117 34 chr2 79610258 79610318 -173646265 - L1MCa LINE L1 -4556 1870 1816 23 0 0 0 chr2 79610347 79610370 -173646213 + AT_rich Low_complexity Low_complexity 1 23 0 2278 104 0 0 chr2 79611915 79612212 -173644371 + AluSc SINE Alu 1 297 -12 2392 49 3 20 chr2 79613581 79613886 -173642697 + AluY SINE Alu 1 300 -11 771 226 52 59 chr2 79614289 79614595 -173641988 - Tigger8 DNA MER2_type -142 524 221 648 285 89 21 chr2 79614677 79614912 -173641671 + MIR SINE MIR 10 260 -2 28 86 0 0 chr2 79615108 79615178 -173641405 + AT_rich Low_complexity Low_complexity 1 70 0 286 250 22 81 chr2 79615281 79615417 -173641166 - MLT1I LTR MaLR -2 407 280 192 208 151 47 chr2 79616164 79616270 -173640313 - L3 LINE CR1 -400 1177 1061 711 293 88 38 chr2 79616307 79616625 -173639958 - MLT1I LTR MaLR -5 404 71 1911 149 0 14 chr2 79616910 79617221 -173639362 - AluSx SINE Alu 0 307 1 2618 100 3 13 chr2 79618295 79618674 -173637909 - THE1C LTR MaLR 0 375 1 2387 84 0 0 chr2 79618969 79619266 -173637317 + AluY SINE Alu 1 297 -14 264 290 184 29 chr2 79619563 79619770 -173636813 - MIR SINE MIR 0 262 24 265 348 44 61 chr2 79619869 79620165 -173636418 - L2 LINE L2 -623 2691 2401 2129 123 7 0 chr2 79620562 79620871 -173635712 + AluY SINE Alu 1 311 0 762 195 138 62 chr2 79621242 79621575 -173635008 + MSTD LTR MaLR 6 396 0 229 229 71 0 chr2 79622477 79622547 -173634036 - L1ME LINE L1 -320 5801 5727 251 324 9 38 chr2 79622728 79622833 -173633750 + L2 LINE L2 3171 3272 0 564 297 28 11 chr2 79623512 79623694 -173632889 - L1ME2 LINE L1 0 6164 5980 3147 250 75 16 chr2 79623708 79625449 -173631134 - L1ME2 LINE L1 -366 5798 3946 183 339 48 40 chr2 79626254 79626378 -173630205 + MIR SINE MIR 126 250 -12 3085 52 25 29 chr2 79629203 79629694 -173626889 + MLT2A1 LTR ERVL 1 453 0 289 67 22 0 chr2 79629700 79629745 -173626838 + MLT2A2 LTR ERVL 408 453 0 304 316 59 87 chr2 79629777 79630030 -173626553 + MIR SINE MIR 1 246 -16 25 31 0 0 chr2 79630261 79630293 -173626290 + AT_rich Low_complexity Low_complexity 1 32 0 22 35 0 0 chr2 79630399 79630428 -173626155 + AT_rich Low_complexity Low_complexity 1 29 0 242 85 0 21 chr2 79631496 79631543 -173625040 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 22 35 0 0 chr2 79631829 79631858 -173624725 + AT_rich Low_complexity Low_complexity 1 29 0 26 30 0 0 chr2 79632725 79632758 -173623825 + AT_rich Low_complexity Low_complexity 1 33 0 406 287 41 8 chr2 79632920 79633042 -173623541 - L2 LINE L2 -1 3312 3187 2109 128 0 10 chr2 79633210 79633523 -173623060 - AluSx SINE Alu -2 310 1 886 284 121 65 chr2 79633677 79634266 -173622317 - L2 LINE L2 -864 2450 1829 201 143 32 16 chr2 79634374 79634423 -173622160 + (TA)n Simple_repeat Simple_repeat 2 54 -11 2230 118 0 0 chr2 79634423 79634728 -173621855 + AluY SINE Alu 1 305 -6 201 143 32 16 chr2 79634728 79634741 -173621842 + (TA)n Simple_repeat Simple_repeat 54 65 0 319 271 153 6 chr2 79634741 79634918 -173621665 + L1MD2 LINE L1 6135 6337 -22 463 330 158 0 chr2 79634926 79635129 -173621454 + MIR SINE MIR 28 262 0 1517 158 7 40 chr2 79635309 79635582 -173621001 + AluSx SINE Alu 1 264 -48 366 80 0 0 chr2 79635637 79635687 -173620896 + (GA)n Simple_repeat Simple_repeat 1 50 0 220 222 19 0 chr2 79635766 79635820 -173620763 - L2 LINE L2 -1481 1833 1779 263 167 19 0 chr2 79635875 79635929 -173620654 - L2 LINE L2 -1481 1833 1779 21 36 0 0 chr2 79636150 79636178 -173620405 + AT_rich Low_complexity Low_complexity 1 28 0 197 247 165 12 chr2 79636311 79636396 -173620187 + MIR SINE MIR 79 176 -86 2593 146 2 12 chr2 79636444 79636875 -173619708 - L1PB1 LINE L1 -8 6143 5717 12111 189 87 4 chr2 79636877 79641142 -173615441 - L1PBa LINE L1 -2238 4624 6 1350 172 0 0 chr2 79641341 79641568 -173615015 - AluSg/x SINE Alu -4 306 80 635 200 0 17 chr2 79641581 79641701 -173614882 - FLAM_C SINE Alu -15 118 1 253 299 52 10 chr2 79641846 79641943 -173614640 + MIR SINE MIR 162 262 0 317 318 46 106 chr2 79642071 79642374 -173614209 + MLT1J LTR MaLR 36 315 -196 748 200 47 58 chr2 79642374 79642564 -173614019 + MER5A DNA MER1_type 1 188 -1 317 318 46 106 chr2 79642564 79642628 -173613955 + MLT1J LTR MaLR 315 381 -130 182 388 52 0 chr2 79643153 79643269 -173613314 - L2 LINE L2 -8 3264 3143 1915 220 20 37 chr2 79643351 79643838 -173612745 - L1MA9 LINE L1 -38 6274 5796 300 326 0 0 chr2 79643867 79643956 -173612627 - L1MC4 LINE L1 -1339 6703 6615 1998 159 116 16 chr2 79643968 79644425 -173612158 - Tigger2 DNA MER2_type 0 2718 2 211 256 0 0 chr2 79644425 79644468 -173612115 + (TA)n Simple_repeat Simple_repeat 1 43 0 761 219 49 0 chr2 79644468 79644692 -173611891 - L1MA9 LINE L1 -370 5798 5547 304 320 66 8 chr2 79644692 79644814 -173611769 - L1ME LINE L1 -639 5482 5354 361 314 69 25 chr2 79644948 79645107 -173611476 + MIR SINE MIR 23 188 -74 296 294 119 6 chr2 79645108 79645285 -173611298 + L2 LINE L2 1761 1957 -1357 540 317 80 45 chr2 79645287 79645836 -173610747 + L2 LINE L2 1873 2440 -874 190 333 11 32 chr2 79645900 79645993 -173610590 + L2 LINE L2 2600 2690 -624 494 285 29 12 chr2 79646729 79646901 -173609682 + LTR16C LTR ERVL 263 437 -54 1745 155 137 29 chr2 79647218 79647604 -173608979 - MSTA LTR MaLR 0 428 1 275 284 49 25 chr2 79647772 79647853 -173608730 + L2 LINE L2 2976 3058 -214 43941 43 1 4 chr2 79648118 79654294 -173602289 - L1PA3 LINE L1 0 6155 1 533 325 96 42 chr2 79655257 79655363 -173601220 - L2 LINE L2 -1504 1810 1711 2154 92 24 0 chr2 79655363 79655658 -173600925 + AluY SINE Alu 1 302 -9 533 325 96 42 chr2 79655658 79655856 -173600727 - L2 LINE L2 -1603 1711 1525 2219 161 13 10 chr2 79655856 79656254 -173600329 + MER57A LTR ERV1 5 403 0 533 325 96 42 chr2 79656254 79656419 -173600164 - L2 LINE L2 -1789 1525 1315 484 79 0 0 chr2 79657630 79657693 -173598890 - LTR17 LTR ERV1 -717 63 1 328 324 45 0 chr2 79657870 79657981 -173598602 + L2 LINE L2 3190 3305 -8 218 192 64 13 chr2 79658539 79658617 -173597966 + (TCTG)n Simple_repeat Simple_repeat 1 82 0 1812 134 47 78 chr2 79658891 79659278 -173597305 + THE1C LTR MaLR 1 375 0 9283 133 18 38 chr2 79659280 79660890 -173595693 + THE1C-int LTR MaLR 3 1580 0 540 171 0 29 chr2 79660890 79660995 -173595588 + THE1C LTR MaLR 1 102 -326 192 214 0 48 chr2 79661151 79661193 -173595390 + MIR SINE MIR 53 92 -170 275 31 0 0 chr2 79661216 79661248 -173595335 - tRNA-Ile-ATT tRNA tRNA -38 39 8 190 180 100 0 chr2 79661319 79661369 -173595214 + MIR SINE MIR 165 219 -43 683 345 92 35 chr2 79661747 79662662 -173593921 - L2 LINE L2 -2 3311 2316 722 302 115 23 chr2 79662713 79663018 -173593565 + MLT1I LTR MaLR 63 395 -14 606 347 22 7 chr2 79663035 79663312 -173593271 - L2 LINE L2 -998 2316 2036 182 358 21 0 chr2 79663363 79663458 -173593125 - L2 LINE L2 -1385 1929 1833 407 19 19 0 chr2 79663519 79663571 -173593012 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 275 333 92 42 chr2 79664721 79664841 -173591742 - L2 LINE L2 -31 3241 3116 1989 234 103 63 chr2 79665129 79666012 -173590571 - L1ME2 LINE L1 -12 6221 5305 1723 188 91 33 chr2 79666672 79667207 -173589376 + MLT2A2 LTR ERVL 1 554 0 317 331 109 6 chr2 79667442 79667617 -173588966 + L2 LINE L2 1093 1285 -2029 722 294 57 11 chr2 79667789 79668157 -173588426 - L1ME2 LINE L1 -3433 2782 2398 447 319 47 40 chr2 79668175 79668451 -173588132 - L1ME2 LINE L1 -4732 1664 1387 1038 204 196 12 chr2 79668925 79668999 -173587584 - AluJb SINE Alu 0 625 566 1208 93 0 11 chr2 79668999 79669181 -173587402 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 1038 204 196 12 chr2 79669181 79669407 -173587176 - AluJb SINE Alu -59 566 383 486 0 0 0 chr2 79669407 79669461 -173587122 + (TCTA)n Simple_repeat Simple_repeat 3 56 0 1038 204 196 12 chr2 79669461 79669556 -173587027 - AluJb SINE Alu -242 383 1 185 128 0 26 chr2 79669834 79669873 -173586710 + (TCTCC)n Simple_repeat Simple_repeat 3 40 0 606 259 81 6 chr2 79669909 79670083 -173586500 + MIR SINE MIR 76 262 0 765 351 61 61 chr2 79670129 79671136 -173585447 + L2 LINE L2 2177 3189 -124 1623 292 29 34 chr2 79671250 79672006 -173584577 + HAL1b LINE L1 159 910 -438 248 321 92 43 chr2 79672008 79672192 -173584391 - L2 LINE L2 -88 3225 3033 21 0 0 0 chr2 79673972 79673993 -173582590 + AT_rich Low_complexity Low_complexity 1 21 0 34 0 0 0 chr2 79674775 79674809 -173581774 + AT_rich Low_complexity Low_complexity 1 34 0 1419 207 55 54 chr2 79675148 79675640 -173580943 - LTR28 LTR ERV1 -131 505 3 1324 170 0 5 chr2 79676044 79676256 -173580327 - AluJb SINE Alu -15 297 87 305 348 66 25 chr2 79676439 79676683 -173579900 - L1ME LINE L1 -569 5552 5299 2632 75 29 0 chr2 79677446 79677791 -173578792 - THE1A LTR MaLR 0 355 1 2574 61 3 0 chr2 79679433 79679743 -173576840 - AluSp SINE Alu -2 311 1 370 306 89 74 chr2 79680606 79680864 -173575719 - LTR16A LTR ERVL -93 357 96 2238 205 84 34 chr2 79683352 79683524 -173573059 + L1MC3 LINE L1 7153 7315 -470 1172 194 47 101 chr2 79683524 79683910 -173572673 - MLT1A1 LTR MaLR 0 365 1 2238 205 84 34 chr2 79683910 79684332 -173572251 + L1MC3 LINE L1 7315 7777 -8 781 278 52 0 chr2 79684471 79684683 -173571900 - MER58A DNA MER1_type 0 224 2 2298 88 0 31 chr2 79686075 79686393 -173570190 - AluSp SINE Alu -5 308 1 263 348 7 43 chr2 79687165 79687303 -173569280 + MIR3 SINE MIR 37 169 -39 993 300 122 12 chr2 79689214 79689738 -173566845 - HERVL LTR ERVL -936 4549 3967 300 250 0 54 chr2 79689748 79689840 -173566743 - MER5C DNA MER1_type 0 324 238 375 345 66 25 chr2 79689869 79690188 -173566395 - HERVL LTR ERVL -1716 3938 3607 1750 268 53 48 chr2 79690574 79691157 -173565426 - MLT1E LTR MaLR 0 593 8 361 307 42 34 chr2 79691304 79691542 -173565041 - HERVL LTR ERVL -2739 2915 2676 1478 107 45 18 chr2 79691546 79691770 -173564813 + MER30 DNA MER1_type 1 230 0 3652 41 0 0 chr2 79692345 79692787 -173563796 - L1P LINE L1 -1134 5012 4571 1702 154 18 11 chr2 79692851 79693156 -173563427 - AluSx SINE Alu 0 307 1 269 302 21 0 chr2 79693861 79693957 -173562626 - MIR SINE MIR -11 251 154 903 273 34 4 chr2 79693962 79694229 -173562354 - MER93a LTR ERV1 0 402 128 378 278 18 95 chr2 79694373 79694542 -173562041 - MIR SINE MIR -105 157 2 1840 192 2 56 chr2 79694569 79694981 -173561602 + MLT1B LTR MaLR 1 390 0 21 57 0 0 chr2 79695633 79695668 -173560915 + AT_rich Low_complexity Low_complexity 1 35 0 954 294 123 39 chr2 79698136 79698159 -173558424 + MLT1G LTR MaLR 10 30 -560 2207 121 3 0 chr2 79698159 79698464 -173558119 - AluSq SINE Alu -5 308 3 954 294 123 39 chr2 79698464 79698960 -173557623 + MLT1G LTR MaLR 30 573 -17 2376 81 13 3 chr2 79699167 79699475 -173557108 + AluY SINE Alu 1 311 0 201 39 0 0 chr2 79699677 79699703 -173556880 + (TC)n Simple_repeat Simple_repeat 1 26 0 360 0 0 0 chr2 79699705 79699745 -173556838 + (CA)n Simple_repeat Simple_repeat 2 41 0 289 316 0 11 chr2 79700278 79700373 -173556210 + MIR SINE MIR 123 216 -46 506 169 59 44 chr2 79701209 79701345 -173555238 + L1ME1 LINE L1 5703 5840 -326 292 291 10 19 chr2 79701345 79701448 -173555135 + LTR68 LTR ERV1 330 431 -309 4469 257 35 16 chr2 79701621 79702720 -173553863 + L1MD2 LINE L1 3692 4830 -1316 2013 136 8 63 chr2 79702720 79702889 -173553694 + THE1C LTR MaLR 1 178 -197 2035 113 21 3 chr2 79702889 79703180 -173553403 - AluSx SINE Alu -16 296 1 2013 136 8 63 chr2 79703180 79703407 -173553176 + THE1C LTR MaLR 178 375 0 4469 257 35 16 chr2 79703407 79703872 -173552711 + L1MD2 LINE L1 4830 5285 -861 1256 265 73 13 chr2 79703861 79704246 -173552337 + L1MD2 LINE L1 5706 6113 -246 * 181 250 181 14 chr2 79704406 79704478 -173552105 - L2 LINE L2 0 3313 3230 1705 175 13 25 chr2 79704929 79705243 -173551340 - AluJb SINE Alu 0 312 3 505 229 57 46 chr2 79705309 79705571 -173551012 + L1MC5 LINE L1 7619 7883 -78 22 70 0 0 chr2 79706449 79706492 -173550091 + AT_rich Low_complexity Low_complexity 1 43 0 849 340 142 24 chr2 79706627 79706781 -173549802 - L2 LINE L2 -15 3257 3123 270 0 0 0 chr2 79706781 79706811 -173549772 + (TG)n Simple_repeat Simple_repeat 2 31 0 849 340 142 24 chr2 79706811 79707782 -173548801 - L2 LINE L2 -149 3123 1997 942 209 73 19 chr2 79708034 79708206 -173548377 - AluJo SINE Alu -11 301 115 236 91 23 0 chr2 79708206 79708250 -173548333 + (TTTG)n Simple_repeat Simple_repeat 4 48 0 942 209 73 19 chr2 79708250 79708283 -173548300 - AluJo SINE Alu -197 115 85 370 180 45 11 chr2 79708799 79708888 -173547695 + MIR3 SINE MIR 105 196 -12 251 265 0 7 chr2 79709618 79709754 -173546829 + GA-rich Low_complexity Low_complexity 1 135 0 326 267 128 43 chr2 79710339 79710526 -173546057 - MIR SINE MIR -10 252 50 349 255 262 14 chr2 79710621 79710762 -173545821 + MER5A DNA MER1_type 5 180 -9 228 163 38 75 chr2 79710886 79710966 -173545617 - LTR10E LTR ERV1 -237 396 320 1020 248 74 15 chr2 79711172 79711511 -173545072 - L1ME1 LINE L1 -5 6161 5803 1797 198 21 18 chr2 79711553 79711937 -173544646 + MER88 LTR ERVL 80 464 0 1786 217 86 26 chr2 79711940 79712666 -173543917 - L1ME1 LINE L1 -358 5806 5036 266 137 95 74 chr2 79712765 79712860 -173543723 - MER51D LTR ERV1 -44 613 517 1299 194 53 8 chr2 79713154 79713417 -173543166 - MER50 LTR ERV1 -5 729 455 564 67 67 11 chr2 79713465 79713554 -173543029 - AluSc SINE Alu -21 288 195 694 223 100 87 chr2 79713556 79713937 -173542646 - MER50 LTR ERV1 -338 396 11 572 178 9 169 chr2 79714075 79714300 -173542283 + LTR68 LTR ERV1 245 433 -307 315 0 0 0 chr2 79714453 79714488 -173542095 + (A)n Simple_repeat Simple_repeat 1 35 0 1704 272 105 23 chr2 79714515 79714583 -173542000 - L1ME1 LINE L1 -2469 3677 3616 2057 118 11 0 chr2 79714583 79714894 -173541689 + AluSx SINE Alu 1 314 0 1704 272 105 23 chr2 79714894 79715035 -173541548 - L1ME1 LINE L1 -2530 3616 3488 1305 224 80 49 chr2 79715035 79715487 -173541096 - MER31B LTR ERV1 0 466 1 1704 272 105 23 chr2 79715487 79716519 -173540064 - L1ME1 LINE L1 -2658 3488 2304 1149 161 48 0 chr2 79716531 79716717 -173539866 - AluJb SINE Alu -21 291 97 2364 179 34 2 chr2 79716726 79717173 -173539410 - LOR1b LTR ERV1 0 461 1 619 109 0 11 chr2 79717173 79717265 -173539318 - LOR1b-int LTR ERV1 0 8120 8030 * 1758 117 0 0 chr2 79717264 79717520 -173539063 - LOR1-int LTR ERV1 -2056 6064 5809 * 4810 102 22 21 chr2 79717519 79718283 -173538300 - LOR1-int LTR ERV1 -2596 5524 4760 2173 145 31 14 chr2 79718301 79718659 -173537924 - THE1B LTR MaLR 0 364 1 1080 74 0 0 chr2 79718659 79718808 -173537775 - THE1B-int LTR MaLR 0 1580 1432 236 269 0 0 chr2 79718808 79718860 -173537723 + LTR30 LTR ERV1 1 52 -670 1001 191 47 147 chr2 79718860 79719466 -173537117 + LTR12 LTR ERV1 55 480 -234 10488 113 1 1 chr2 79719467 79720901 -173535682 - THE1B-int LTR MaLR -145 1435 2 1754 165 58 58 chr2 79720902 79721266 -173535317 - THE1B LTR MaLR 0 364 1 4156 133 34 31 chr2 79721267 79722033 -173534550 - LOR1-int LTR ERV1 -3369 4751 3984 2099 240 16 47 chr2 79722038 79722618 -173533965 - MER52A LTR ERV1 -4 1751 610 1458 194 247 110 chr2 79722653 79723272 -173533311 - MER52A LTR ERV1 -407 1348 645 7710 106 25 25 chr2 79723272 79724517 -173532066 - LOR1b-int LTR ERV1 -4141 3979 2735 3452 132 33 21 chr2 79724499 79725071 -173531512 - LOR1b-int LTR ERV1 -5543 2577 1994 * 2184 70 42 11 chr2 79725071 79725379 -173531204 - AluY SINE Alu 0 311 1 3452 132 33 21 chr2 79725379 79725464 -173531119 - LOR1b-int LTR ERV1 -6126 1994 1912 1940 175 22 8 chr2 79725463 79725828 -173530755 - LOR1b-int LTR ERV1 -7750 370 1 * 2351 187 10 0 chr2 79725828 79726245 -173530338 - LOR1b LTR ERV1 0 461 41 189 107 0 0 chr2 79726245 79726273 -173530310 + (A)n Simple_repeat Simple_repeat 1 28 0 1955 243 54 101 chr2 79726337 79726621 -173529962 - L1MDa LINE L1 -3893 2187 1891 1948 149 47 3 chr2 79726621 79726943 -173529640 - MER1B DNA MER1_type 0 337 2 1955 243 54 101 chr2 79726943 79728018 -173528565 - L1MDa LINE L1 -4189 1891 891 312 231 2 8 chr2 79728045 79728137 -173528446 - LTR37A LTR ERV1 -53 415 298 336 232 108 62 chr2 79728222 79728416 -173528167 - LTR37B LTR ERV1 -260 208 6 440 313 47 33 chr2 79729483 79729758 -173526825 + MER96B DNA MER1_type? 131 409 -8 5257 149 12 29 chr2 79729818 79730728 -173525855 - MER4D LTR ERV1 -8 895 1 220 237 17 0 chr2 79730892 79730951 -173525632 + MIR3 SINE MIR 108 167 -41 4501 169 6 10 chr2 79730978 79731764 -173524819 - LTR39 LTR ERV1 0 783 1 239 320 10 30 chr2 79731764 79731864 -173524719 + MER5B DNA MER1_type 31 128 -50 758 243 65 99 chr2 79731988 79732125 -173524458 - L1MDa LINE L1 -5162 908 768 1990 61 11 43 chr2 79732125 79732402 -173524181 + AluY SINE Alu 37 304 -7 758 243 65 99 chr2 79732402 79732667 -173523916 - L1MDa LINE L1 -5302 768 520 7569 29 0 0 chr2 79783715 79785042 -173471541 + L1PA4 LINE L1 4811 6148 -7 23 33 0 0 chr2 79785485 79785515 -173471068 + AT_rich Low_complexity Low_complexity 1 30 0 1659 181 55 0 chr2 79785559 79785851 -173470732 - AluJo SINE Alu -4 308 1 2602 176 66 2 chr2 79785858 79786388 -173470195 - L1MB3 LINE L1 0 6183 5620 362 311 125 40 chr2 79786530 79786955 -173469628 + L1ME1 LINE L1 1628 2088 -4308 313 306 126 0 chr2 79787178 79787194 -173469389 + L1ME1 LINE L1 2344 2357 -3858 2358 76 9 16 chr2 79787194 79787509 -173469074 + AluSq SINE Alu 1 313 0 313 306 126 0 chr2 79787509 79787675 -173468908 + L1ME1 LINE L1 2357 2549 -3666 3289 210 19 5 chr2 79787680 79788324 -173468259 + Tigger6a DNA MER2_type 4 656 -427 241 259 47 0 chr2 79788396 79788481 -173468102 + L1M4 LINE L1 4903 4991 -1155 8777 36 2 0 chr2 79789032 79790108 -173466475 - L1P LINE L1 -1248 4898 3821 2188 110 0 0 chr2 79790109 79790399 -173466184 - AluSq SINE Alu -23 290 1 2026 135 7 3 chr2 79790399 79790695 -173465888 - AluSx SINE Alu -11 301 5 198 0 0 0 chr2 79790792 79790814 -173465769 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 1759 137 27 0 chr2 79790921 79791240 -173465343 + AluSx SINE Alu 14 339 0 2613 174 2 40 chr2 79791857 79792258 -173464325 + MER66B LTR ERV1 28 410 -76 1035 72 0 182 chr2 79792258 79792494 -173464089 - 7SK RNA RNA 0 193 1 2613 174 2 40 chr2 79792494 79792569 -173464014 + MER66B LTR ERV1 410 486 0 21 0 0 0 chr2 79793486 79793507 -173463076 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr2 79793551 79793577 -173463006 + AT_rich Low_complexity Low_complexity 1 26 0 323 284 150 71 chr2 79794034 79794428 -173462155 + L2 LINE L2 2818 3242 -71 240 264 0 0 chr2 79794763 79794816 -173461767 + L2 LINE L2 3252 3304 -9 268 241 134 27 chr2 79795519 79795631 -173460952 - L1ME LINE L1 -460 5661 5538 1177 204 79 62 chr2 79796045 79796398 -173460185 - MLT1B LTR MaLR 0 390 32 4425 244 67 32 chr2 79797581 79800130 -173456453 + L1ME1 LINE L1 3571 6217 -18 1607 219 134 77 chr2 79800979 79801665 -173454918 + MER50 LTR ERV1 10 734 0 22 0 0 0 chr2 79801892 79801914 -173454669 + AT_rich Low_complexity Low_complexity 1 22 0 404 213 32 11 chr2 79801928 79802022 -173454561 + MER21B LTR ERV1 1 96 -767 4028 217 30 6 chr2 79802036 79802860 -173453723 + MER21B LTR ERV1 19 862 -1 605 245 135 26 chr2 79803244 79803436 -173453147 - MIR SINE MIR -47 215 3 1322 217 33 56 chr2 79803495 79803855 -173452728 + MLT2C1 LTR ERVL 1 352 -45 252 172 0 0 chr2 79803856 79803914 -173452669 + CT-rich Low_complexity Low_complexity 1 58 0 852 283 167 54 chr2 79803949 79804962 -173451621 + HAL1 LINE L1 743 1869 -638 398 233 8 0 chr2 79806136 79806269 -173450314 + (TG)n Simple_repeat Simple_repeat 2 135 0 262 284 102 16 chr2 79808261 79808388 -173448195 - MIR SINE MIR -6 256 119 1566 198 10 10 chr2 79808452 79808760 -173447823 - AluJo SINE Alu -1 311 4 181 388 66 16 chr2 79809817 79809938 -173446645 + L2 LINE L2 2934 3060 -212 32 67 0 0 chr2 79811230 79811290 -173445293 + AT_rich Low_complexity Low_complexity 1 60 0 299 350 85 55 chr2 79812036 79812567 -173444016 + MLT1K LTR MaLR 39 585 -3 428 323 70 35 chr2 79812805 79813034 -173443549 + MIR SINE MIR 25 261 -1 216 356 0 40 chr2 79813320 79813421 -173443162 + MER5A DNA MER1_type 93 189 0 528 303 0 6 chr2 79813431 79813606 -173442977 + MER5B DNA MER1_type 5 178 0 466 307 45 40 chr2 79813630 79813832 -173442751 - MIR SINE MIR -11 251 49 771 265 6 0 chr2 79814264 79814430 -173442153 - MER5A DNA MER1_type -14 175 9 2450 68 0 0 chr2 79814548 79814841 -173441742 + AluY SINE Alu 1 293 -18 210 410 0 9 chr2 79814872 79814977 -173441606 - MIR SINE MIR -124 138 35 198 0 0 0 chr2 79815920 79815942 -173440641 + (CA)n Simple_repeat Simple_repeat 2 23 0 24 67 0 0 chr2 79816155 79816200 -173440383 + AT_rich Low_complexity Low_complexity 1 45 0 303 295 84 35 chr2 79816418 79816744 -173439839 + L1ME LINE L1 5304 5655 -466 23 0 0 0 chr2 79816872 79816895 -173439688 + AT_rich Low_complexity Low_complexity 1 23 0 1544 179 27 24 chr2 79817700 79817996 -173438587 + AluJb SINE Alu 3 299 -13 2729 137 19 0 chr2 79818034 79818459 -173438124 + MER57B LTR ERV1 2 434 0 4068 146 18 26 chr2 79818459 79819137 -173437446 + MER57B-int LTR ERV1 1 672 -6865 3481 132 44 6 chr2 79819134 79819868 -173436715 + MER51-int LTR ERV1 288 1136 -4810 * 5884 177 78 35 chr2 79819858 79820909 -173435674 + MER51-int LTR ERV1 1371 2375 -5061 2138 91 3 17 chr2 79820909 79821207 -173435376 - AluSc SINE Alu -15 294 1 5884 177 78 35 chr2 79821207 79821448 -173435135 + MER51-int LTR ERV1 2375 2604 -4832 2420 91 0 0 chr2 79821448 79821757 -173434826 - AluY SINE Alu -2 309 1 5884 177 78 35 chr2 79821757 79822695 -173433888 + MER51-int LTR ERV1 2604 5205 -2231 3726 91 27 0 chr2 79822700 79823225 -173433358 + MER51-int LTR ERV1 5309 5847 -1690 23 54 0 0 chr2 79823583 79823620 -173432963 + AT_rich Low_complexity Low_complexity 1 37 0 28 48 0 0 chr2 79823695 79823737 -173432846 + AT_rich Low_complexity Low_complexity 1 42 0 1762 144 31 10 chr2 79823865 79824156 -173432427 + AluJo SINE Alu 1 297 -15 189 0 0 0 chr2 79824307 79824328 -173432255 + (TAAAAA)n Simple_repeat Simple_repeat 2 22 0 843 214 46 165 chr2 79826182 79826567 -173430016 + MLT1G LTR MaLR 56 344 -246 7809 18 0 0 chr2 79826567 79827583 -173429000 - L1PA3 LINE L1 -3 6152 5137 843 214 46 165 chr2 79827583 79827804 -173428779 + MLT1G LTR MaLR 344 590 0 377 330 214 32 chr2 79827918 79828264 -173428319 - L3 LINE CR1 -512 1065 657 245 352 71 47 chr2 79828976 79829314 -173427269 + L2 LINE L2 2356 2701 -613 194 313 111 0 chr2 79829339 79829438 -173427145 - L2 LINE L2 -16 3256 3147 242 359 22 0 chr2 79830764 79830856 -173425727 + MIR SINE MIR 159 252 -10 210 306 0 0 chr2 79832240 79832289 -173424294 - L2 LINE L2 -14 3258 3210 1590 199 29 28 chr2 79832815 79833236 -173423347 + L1MD3 LINE L1 7049 7701 -294 21 36 0 0 chr2 79834248 79834276 -173422307 + AT_rich Low_complexity Low_complexity 1 28 0 1691 125 6 110 chr2 79834615 79834806 -173421777 - AluY SINE Alu -17 294 85 189 0 0 0 chr2 79834806 79834827 -173421756 + (TTAA)n Simple_repeat Simple_repeat 3 23 0 2146 106 0 0 chr2 79834827 79835110 -173421473 - AluSc SINE Alu -26 283 1 1691 125 6 110 chr2 79835110 79835245 -173421338 - AluY SINE Alu -224 87 1 965 290 63 20 chr2 79835407 79835899 -173420684 + L2 LINE L2 2606 3130 -183 690 310 93 56 chr2 79835940 79836404 -173420179 + L2 LINE L2 2829 3309 -4 326 326 69 29 chr2 79836554 79836729 -173419854 - MLT1J LTR MaLR -93 418 237 504 86 0 0 chr2 79838219 79838289 -173418294 + (TCCCC)n Simple_repeat Simple_repeat 5 74 0 1130 146 6 0 chr2 79838408 79838579 -173418004 - AluSx SINE Alu -140 172 1 1093 281 57 42 chr2 79838592 79839065 -173417518 - MLT1J LTR MaLR -31 480 1 260 241 48 60 chr2 79841199 79841282 -173415301 - L2 LINE L2 -18 3254 3173 24 0 0 0 chr2 79842082 79842106 -173414477 + AT_rich Low_complexity Low_complexity 1 24 0 238 353 106 12 chr2 79843855 79843940 -173412643 + L2 LINE L2 3142 3234 -38 1665 239 58 49 chr2 79846580 79847094 -173409489 - LTR40a LTR ERVL 0 519 1 285 29 0 0 chr2 79847703 79847737 -173408846 + (TG)n Simple_repeat Simple_repeat 1 34 0 421 323 75 6 chr2 79847740 79847901 -173408682 - MIR SINE MIR -2 260 89 2182 138 0 0 chr2 79850315 79850627 -173405956 - AluSx SINE Alu 0 312 1 289 307 10 30 chr2 79850634 79850735 -173405848 + L2 LINE L2 3177 3275 -38 333 293 9 0 chr2 79850760 79850866 -173405717 + (TA)n Simple_repeat Simple_repeat 2 108 0 513 254 219 5 chr2 79851478 79851683 -173404900 - MIR SINE MIR 0 262 14 1822 261 152 2 chr2 79852733 79853253 -173403330 + MLT2F LTR ERVL 1 598 -65 25 65 0 0 chr2 79854040 79854086 -173402497 + AT_rich Low_complexity Low_complexity 1 46 0 270 245 75 0 chr2 79854641 79854735 -173401848 + L1ME LINE L1 5724 5824 -297 408 285 101 25 chr2 79854819 79854977 -173401606 - MIR SINE MIR -50 212 43 718 310 63 51 chr2 79855882 79856372 -173400211 + MLT1H1 LTR MaLR 58 553 -2 5005 187 40 6 chr2 79856399 79857661 -173398922 + L1MA8 LINE L1 4993 6291 0 23 54 0 0 chr2 79858050 79858087 -173398496 + AT_rich Low_complexity Low_complexity 1 37 0 5017 187 64 26 chr2 79858240 79859790 -173396793 - L1MC2 LINE L1 0 6344 4755 262 206 29 29 chr2 79859932 79860000 -173396583 + MLT1C LTR MaLR 1 68 -399 1196 235 20 0 chr2 79860168 79860423 -173396160 + LTR53 LTR ERVL 197 456 -63 243 190 224 0 chr2 79860478 79860536 -173396047 + MLT1C LTR MaLR 52 122 -345 1661 221 52 3 chr2 79860536 79860917 -173395666 + MLT1H1-int LTR MaLR 300 699 -672 790 236 185 5 chr2 79860958 79861174 -173395409 + MLT1C LTR MaLR 206 460 -7 211 140 40 0 chr2 79861174 79861224 -173395359 + (CATATA)n Simple_repeat Simple_repeat 2 53 0 484 276 63 94 chr2 79861983 79862216 -173394367 - HAL1 LINE L1 -4 2503 2264 2412 77 0 0 chr2 79862216 79862515 -173394068 - AluY SINE Alu -12 299 1 484 276 63 94 chr2 79862515 79862824 -173393759 - HAL1 LINE L1 -243 2264 1978 543 260 48 149 chr2 79863007 79863528 -173393055 + MER77 LTR ERV1 53 516 -89 368 22 0 0 chr2 79863528 79863574 -173393009 - MADE1 DNA Mariner 0 80 35 479 229 43 38 chr2 79863666 79863850 -173392733 + MER21B LTR ERV1 504 670 -6 397 316 151 15 chr2 79863950 79864222 -173392361 - HAL1 LINE L1 -651 1856 1548 489 274 35 69 chr2 79864268 79864615 -173391968 - HAL1 LINE L1 -1045 1462 1128 259 167 0 56 chr2 79864679 79864751 -173391832 + T-rich Low_complexity Low_complexity 1 68 0 23 33 0 0 chr2 79864972 79865002 -173391581 + AT_rich Low_complexity Low_complexity 1 30 0 225 154 0 0 chr2 79866827 79866866 -173389717 + (CA)n Simple_repeat Simple_repeat 2 40 0 240 364 51 23 chr2 79866901 79867077 -173389506 + MIR SINE MIR 12 192 -70 344 322 35 75 chr2 79870012 79870239 -173386344 - MIR SINE MIR -16 246 29 402 74 0 0 chr2 79871366 79871420 -173385163 + (TG)n Simple_repeat Simple_repeat 1 54 0 1907 119 0 0 chr2 79871826 79872086 -173384497 - AluSq SINE Alu -53 260 1 22 70 0 0 chr2 79872581 79872624 -173383959 + AT_rich Low_complexity Low_complexity 1 43 0 227 348 67 52 chr2 79873080 79873347 -173383236 - HAL1b LINE L1 -740 608 338 1505 173 3 61 chr2 79873993 79874004 -173382579 - AluJb SINE Alu 0 531 521 985 121 6 6 chr2 79874004 79874170 -173382413 + (TTCC)n Simple_repeat Simple_repeat 3 168 0 1505 173 3 61 chr2 79874170 79874543 -173382040 - AluJb SINE Alu -10 521 1 1396 237 64 48 chr2 79875280 79875673 -173380910 + MER69 DNA AcHobo 2 400 -2126 898 198 250 14 chr2 79875704 79876144 -173380439 + MER69 DNA AcHobo 1919 2462 -64 24 0 0 0 chr2 79877175 79877199 -173379384 + AT_rich Low_complexity Low_complexity 1 24 0 1168 182 230 43 chr2 79877453 79877827 -173378756 + MLT2B3 LTR ERVL 1 554 0 323 300 125 46 chr2 79877841 79878121 -173378462 + L1MC4a LINE L1 6613 6914 -894 1547 194 25 4 chr2 79878705 79878983 -173377600 + AluJb SINE Alu 1 284 -28 22 56 0 0 chr2 79879164 79879200 -173377383 + AT_rich Low_complexity Low_complexity 1 36 0 25 31 0 0 chr2 79882838 79882870 -173373713 + AT_rich Low_complexity Low_complexity 1 32 0 5840 234 71 32 chr2 79883569 79885093 -173371490 + L1MDa LINE L1 42 1506 -5034 1795 208 5 22 chr2 79885093 79885463 -173371120 + MLT1A1 LTR MaLR 2 365 0 5840 234 71 32 chr2 79885463 79886323 -173370260 + L1MDa LINE L1 1506 2332 -4208 1977 109 51 0 chr2 79886323 79886598 -173369985 - AluSp SINE Alu -24 289 1 5840 234 71 32 chr2 79886598 79887931 -173368652 + L1MDa LINE L1 2332 3964 -2576 5114 143 21 6 chr2 79887937 79889234 -173367349 + L1PA16 LINE L1 4848 6157 -9 459 78 0 0 chr2 79889263 79889327 -173367256 + (CA)n Simple_repeat Simple_repeat 1 64 0 3070 241 42 20 chr2 79889327 79890365 -173366218 + L1MDa LINE L1 4185 5245 -1295 603 176 14 54 chr2 79890366 79890514 -173366069 + L1MA9 LINE L1 6133 6274 -38 353 258 109 45 chr2 79890648 79890869 -173365714 + MER106A DNA MER1_type 1 235 -1 250 241 19 0 chr2 79891137 79891191 -173365392 + GA-rich Low_complexity Low_complexity 1 55 0 580 277 133 5 chr2 79892337 79892525 -173364058 - MER58C DNA MER1_type -3 212 1 220 320 27 54 chr2 79892527 79892674 -173363909 + MIR SINE MIR 90 232 -30 212 242 39 8 chr2 79892732 79892860 -173363723 + (TTA)n Simple_repeat Simple_repeat 2 133 0 402 345 110 46 chr2 79893293 79893812 -173362771 - L2 LINE L2 -613 2701 2150 380 325 10 34 chr2 79894630 79894836 -173361747 - MIR SINE MIR -5 257 57 1404 144 22 115 chr2 79894837 79895185 -173361398 - AluJo SINE Alu 0 319 1 1844 203 14 19 chr2 79895733 79896098 -173360485 - MER89 LTR ERV1 0 559 197 404 115 10 125 chr2 79896075 79896171 -173360412 - MER89 LTR ERV1 -474 85 1 * 370 299 24 0 chr2 79897028 79897155 -173359428 + MIR SINE MIR 125 254 -8 231 36 0 0 chr2 79897156 79897184 -173359399 + (TTA)n Simple_repeat Simple_repeat 2 29 0 2116 110 10 10 chr2 79898192 79898500 -173358083 + AluSx SINE Alu 1 308 -4 1547 157 56 0 chr2 79898533 79898801 -173357782 - AluSx SINE Alu -25 287 5 304 311 50 13 chr2 79898928 79899166 -173357417 + L1ME3A LINE L1 3881 4127 -2019 33 43 0 0 chr2 79899427 79899474 -173357109 + AT_rich Low_complexity Low_complexity 1 47 0 796 324 51 16 chr2 79899829 79900453 -173356130 + L1ME3A LINE L1 5295 5940 -230 27 81 0 0 chr2 79900668 79900730 -173355853 + AT_rich Low_complexity Low_complexity 1 62 0 241 264 194 35 chr2 79901034 79901178 -173355405 - MIR SINE MIR -47 215 49 * 670 291 66 73 chr2 79901177 79901586 -173354997 - L2 LINE L2 0 3313 2908 321 299 198 12 chr2 79903408 79903575 -173353008 + MIR3 SINE MIR 6 203 -5 1802 188 31 8 chr2 79905101 79905458 -173351125 + MLT1A1 LTR MaLR 1 365 0 21 36 0 0 chr2 79905591 79905619 -173350964 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr2 79905949 79905978 -173350605 + AT_rich Low_complexity Low_complexity 1 29 0 358 244 89 8 chr2 79906187 79906310 -173350273 - MIR SINE MIR -12 250 118 271 361 31 26 chr2 79906620 79906814 -173349769 - L3 LINE CR1 -1131 446 252 30 27 0 0 chr2 79908871 79908908 -173347675 + AT_rich Low_complexity Low_complexity 1 37 0 3509 28 0 14 chr2 79908956 79909382 -173347201 - L1PA3 LINE L1 0 6155 5736 360 0 0 0 chr2 79909400 79909440 -173347143 + (CA)n Simple_repeat Simple_repeat 2 41 0 23 0 0 0 chr2 79909813 79909836 -173346747 + AT_rich Low_complexity Low_complexity 1 23 0 377 250 174 38 chr2 79909907 79910143 -173346440 - HAL1b LINE L1 -105 1243 976 1011 195 46 17 chr2 79910150 79910343 -173346240 - MER52A LTR ERV1 0 1755 1552 261 0 0 0 chr2 79910343 79910372 -173346211 + (TC)n Simple_repeat Simple_repeat 1 29 0 1011 195 46 17 chr2 79910372 79910419 -173346164 - MER52A LTR ERV1 -203 1552 1508 1836 111 53 0 chr2 79910537 79910799 -173345784 + AluSx SINE Alu 1 276 -36 207 0 0 0 chr2 79910802 79910825 -173345758 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 332 293 178 34 chr2 79910955 79911163 -173345420 - HAL1b LINE L1 -456 892 655 30 0 0 0 chr2 79912066 79912096 -173344487 + AT_rich Low_complexity Low_complexity 1 30 0 3039 128 7 0 chr2 79913151 79913580 -173343003 - MER1A DNA MER1_type 0 529 98 1916 169 0 3 chr2 79913581 79913889 -173342694 + AluJb SINE Alu 1 307 -5 255 170 0 0 chr2 79913894 79913941 -173342642 + A-rich Low_complexity Low_complexity 1 47 0 301 148 82 0 chr2 79913942 79914003 -173342580 - MER1A DNA MER1_type -413 114 49 837 165 0 8 chr2 79914864 79914997 -173341586 + AluJo SINE Alu 81 212 -100 297 247 35 0 chr2 79916006 79916091 -173340492 + MIR SINE MIR 119 206 -56 1007 253 43 34 chr2 79916299 79916876 -173339707 - MER76 LTR ERV -33 655 1 297 207 166 5 chr2 79917243 79917436 -173339147 - MER76 LTR ERV -464 224 1 28 0 0 0 chr2 79917864 79917892 -173338691 + AT_rich Low_complexity Low_complexity 1 28 0 1714 199 22 11 chr2 79918313 79918674 -173337909 - MLT1A1 LTR MaLR 0 365 1 697 239 74 0 chr2 79919964 79920140 -173336443 + MIR SINE MIR 53 241 -21 21 57 0 0 chr2 79920474 79920509 -173336074 + AT_rich Low_complexity Low_complexity 1 35 0 3568 42 0 7 chr2 79920546 79920997 -173335586 - LTR7 LTR ERV1 -2 448 1 2388 90 50 13 chr2 79920997 79921375 -173335208 - HERVH LTR ERV1 0 7713 7322 1399 130 19 0 chr2 79921373 79921589 -173334994 - HERVH LTR ERV1 -1894 5819 5600 * 4483 130 1 1 chr2 79921590 79922252 -173334331 - HERVH LTR ERV1 -2564 5149 4488 25805 86 45 26 chr2 79922254 79926173 -173330410 - HERVH LTR ERV1 -3720 3993 1 3377 67 0 7 chr2 79926175 79926626 -173329957 - LTR7 LTR ERV1 -2 448 1 32 0 0 0 chr2 79926658 79926690 -173329893 + AT_rich Low_complexity Low_complexity 1 32 0 295 331 21 28 chr2 79926764 79926952 -173329631 + LTR33 LTR ERVL 31 186 -337 1016 159 11 33 chr2 79927056 79927238 -173329345 + MER45A DNA AcHobo 1 178 0 232 167 31 73 chr2 79927625 79927721 -173328862 + (TTATA)n Simple_repeat Simple_repeat 4 95 0 965 168 39 5 chr2 79928035 79928238 -173328345 + Tigger2 DNA MER2_type 1 210 -2508 889 183 13 0 chr2 79928237 79928390 -173328193 + Tigger2 DNA MER2_type 2554 2708 -10 * 230 325 0 0 chr2 79928394 79928477 -173328106 + L1MC4 LINE L1 6621 6703 -1339 444 304 62 42 chr2 79928641 79928996 -173327587 - HAL1 LINE L1 -751 1756 1395 3407 207 42 34 chr2 79929037 79930308 -173326275 - L1MA8 LINE L1 -464 5827 4527 * 4489 180 36 113 chr2 79930307 79931795 -173324788 - L1MA8 LINE L1 -2005 4141 2540 2056 122 3 0 chr2 79931795 79932081 -173324502 - AluSc SINE Alu -22 287 1 2117 113 17 7 chr2 79932083 79932376 -173324207 - AluSx SINE Alu -16 296 1 4489 180 36 113 chr2 79932376 79932410 -173324173 - L1MA8 LINE L1 -3378 2768 2733 22 70 0 0 chr2 79932411 79932454 -173324129 + AT_rich Low_complexity Low_complexity 1 43 0 216 0 0 0 chr2 79932693 79932717 -173323866 + (T)n Simple_repeat Simple_repeat 1 24 0 249 379 55 7 chr2 79933737 79933882 -173322701 - MIR SINE MIR -51 211 60 1043 327 62 67 chr2 79935021 79935929 -173320654 - L1M4 LINE L1 -2391 3755 2855 420 20 0 0 chr2 79935929 79935978 -173320605 + (TG)n Simple_repeat Simple_repeat 1 49 0 1043 327 62 67 chr2 79935978 79936422 -173320161 - L1M4 LINE L1 -3291 2855 2410 184 264 55 104 chr2 79936518 79936681 -173319902 - MIR SINE MIR -100 162 8 21 36 0 0 chr2 79936923 79936951 -173319632 + AT_rich Low_complexity Low_complexity 1 28 0 1300 78 11 0 chr2 79936966 79937146 -173319437 - AluY SINE Alu -11 300 119 9842 30 0 1 chr2 79937141 79939086 -173317497 - L1PA3 LINE L1 0 6155 4207 4701 35 0 0 chr2 79939087 79939657 -173316926 + L1PA3 LINE L1 3626 4195 -1951 953 54 47 8 chr2 79939657 79939786 -173316797 - AluY SINE Alu -177 134 1 21 57 0 0 chr2 79940025 79940060 -173316523 + AT_rich Low_complexity Low_complexity 1 35 0 325 274 103 55 chr2 79940315 79940461 -173316122 - HAL1 LINE L1 -1168 1339 1187 942 225 37 0 chr2 79941063 79941254 -173315329 + MER20 DNA MER1_type 17 214 -5 1796 210 100 55 chr2 79941714 79942242 -173314341 + MLT2B3 LTR ERVL 1 552 -2 459 167 0 0 chr2 79942425 79942497 -173314086 - 7SK RNA RNA -1 192 121 3702 163 26 0 chr2 79942577 79943540 -173313043 + L1M2 LINE L1 4657 5641 -671 9612 82 5 16 chr2 79943540 79944849 -173311734 + HERVL LTR ERVL 1887 3180 -2474 3931 76 2 2 chr2 79944833 79945333 -173311250 + HERVL LTR ERVL 4005 4504 -1150 * 666 230 150 0 chr2 79946031 79946218 -173310365 + MER20 DNA MER1_type 1 215 -4 228 310 103 0 chr2 79946225 79946312 -173310271 - L2 LINE L2 -55 3258 3163 334 134 75 30 chr2 79946319 79946386 -173310197 - THE1C LTR MaLR -305 70 1 423 319 55 11 chr2 79946509 79946691 -173309892 - ERVL LTR ERVL -4083 1681 1492 625 269 102 0 chr2 79946815 79947001 -173309582 - LTR41 LTR ERVL -568 205 1 654 234 61 43 chr2 79947128 79947359 -173309224 - MLT1J LTR MaLR -260 251 17 192 171 146 0 chr2 79947370 79947411 -173309172 - L2 LINE L2 -958 2356 2310 324 305 71 29 chr2 79947563 79947773 -173308810 - L1ME LINE L1 -340 5781 5563 356 345 83 31 chr2 79948105 79948395 -173308188 - L1ME LINE L1 -1896 4250 3946 236 167 24 0 chr2 79948760 79948802 -173307781 + L2 LINE L2 3266 3308 -5 9711 107 36 5 chr2 79948806 79950190 -173306393 - THE1A-int LTR MaLR -153 1427 1 2686 79 3 11 chr2 79950190 79950546 -173306037 - THE1A LTR MaLR 0 355 3 231 353 89 31 chr2 79951149 79951373 -173305210 - MIR SINE MIR -14 248 12 275 371 81 11 chr2 79951402 79951588 -173304995 - MIR SINE MIR -23 239 41 24 77 0 0 chr2 79951686 79951738 -173304845 + AT_rich Low_complexity Low_complexity 1 52 0 33 25 0 0 chr2 79951952 79951992 -173304591 + AT_rich Low_complexity Low_complexity 1 40 0 27 0 0 26 chr2 79952371 79952392 -173304191 + AT_rich Low_complexity Low_complexity 1 22 -15 2034 126 7 3 chr2 79952392 79952685 -173303898 - AluSx SINE Alu -18 294 1 27 0 0 26 chr2 79952685 79952701 -173303882 + AT_rich Low_complexity Low_complexity 22 37 0 1788 194 86 8 chr2 79953117 79953514 -173303069 + MSTA LTR MaLR 1 428 0 29 28 0 0 chr2 79953632 79953668 -173302915 + AT_rich Low_complexity Low_complexity 1 36 0 225 0 0 0 chr2 79953809 79953834 -173302749 + (CA)n Simple_repeat Simple_repeat 2 26 0 23 33 0 0 chr2 79954322 79954352 -173302231 + AT_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr2 79954538 79954564 -173302019 + AT_rich Low_complexity Low_complexity 1 26 0 280 342 27 18 chr2 79955126 79955237 -173301346 + L2 LINE L2 3196 3307 -6 357 264 194 7 chr2 79955278 79955422 -173301161 - MIR SINE MIR 0 262 92 22 56 0 0 chr2 79955606 79955642 -173300941 + AT_rich Low_complexity Low_complexity 1 36 0 21 57 0 0 chr2 79955841 79955876 -173300707 + AT_rich Low_complexity Low_complexity 1 35 0 242 173 39 0 chr2 79956285 79956337 -173300246 - L1ME2 LINE L1 -105 6059 6006 305 311 103 64 chr2 79956530 79957308 -173299275 - L1MEd LINE L1 -4908 1211 404 23 0 0 0 chr2 79957308 79957331 -173299252 + AT_rich Low_complexity Low_complexity 1 23 0 198 0 0 0 chr2 79957871 79957893 -173298690 + (TTA)n Simple_repeat Simple_repeat 2 23 0 310 282 143 69 chr2 79957896 79958141 -173298442 - L1MEd LINE L1 -5849 270 8 476 275 63 54 chr2 79958353 79958669 -173297914 + L1ME4a LINE L1 5591 5909 -212 330 333 151 0 chr2 79958707 79958899 -173297684 - MIR SINE MIR -15 247 27 2190 188 39 7 chr2 79959479 79959910 -173296673 - MER65A LTR ERV1 0 445 1 210 398 0 39 chr2 79961154 79961257 -173295326 + L2 LINE L2 2562 2660 -654 21 0 0 0 chr2 79961718 79961739 -173294844 + AT_rich Low_complexity Low_complexity 1 21 0 45 62 0 0 chr2 79962756 79962836 -173293747 + AT_rich Low_complexity Low_complexity 1 80 0 1550 180 7 11 chr2 79962902 79963236 -173293347 + AluJb SINE Alu 1 333 0 243 0 0 0 chr2 79964486 79964513 -173292070 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1241 176 32 57 chr2 79964944 79965300 -173291283 - L1MA4A LINE L1 -26 6277 5871 1798 185 0 10 chr2 79965300 79965598 -173290985 + AluJb SINE Alu 1 295 -17 1241 176 32 57 chr2 79965598 79965676 -173290907 - L1MA4A LINE L1 -432 5871 5793 2381 91 3 0 chr2 79966819 79967128 -173289455 + AluSg SINE Alu 1 310 0 199 322 128 20 chr2 79967326 79967475 -173289108 + MIR SINE MIR 97 261 -1 8334 75 109 6 chr2 79967816 79969021 -173287562 - L1P LINE L1 -4813 1333 4 4876 186 31 9 chr2 79969126 79970268 -173286315 - L1MC1 LINE L1 -144 6189 5017 17629 42 5 0 chr2 79970368 79972589 -173283994 + L1P LINE L1 1386 3617 -2529 3853 258 75 19 chr2 79972769 79973948 -173282635 + L1M4 LINE L1 3154 4439 -1707 198 118 0 0 chr2 79973948 79973982 -173282601 + (TAAAA)n Simple_repeat Simple_repeat 4 37 0 3853 258 75 19 chr2 79973982 79974311 -173282272 + L1M4 LINE L1 4439 4748 -1398 972 320 39 55 chr2 79974322 79974941 -173281642 + L1PA13 LINE L1 789 1397 -6177 247 270 0 70 chr2 79975049 79975149 -173281434 + L1PA13 LINE L1 2090 2182 -5399 2287 267 16 28 chr2 79975387 79975509 -173281074 + L1PA13 LINE L1 2182 2304 -5277 405 0 0 0 chr2 79975509 79975554 -173281029 + (CA)n Simple_repeat Simple_repeat 2 46 0 2287 267 16 28 chr2 79975554 79976185 -173280398 + L1PA13 LINE L1 2304 2926 -4655 5383 236 61 26 chr2 79976289 79979601 -173276982 + L1MCa LINE L1 1706 5154 -1272 4922 28 0 0 chr2 79979731 79980304 -173276279 + L1PA3 LINE L1 5581 6153 -2 22 94 0 0 chr2 79980873 79980937 -173275646 + AT_rich Low_complexity Low_complexity 1 64 0 2285 101 3 7 chr2 79981809 79982117 -173274466 - AluSq SINE Alu -6 307 1 214 180 33 0 chr2 79982611 79982672 -173273911 + GA-rich Low_complexity Low_complexity 2 64 0 514 250 39 61 chr2 79983370 79983550 -173273033 - L2 LINE L2 0 3313 3138 22 35 0 0 chr2 79983550 79983579 -173273004 + AT_rich Low_complexity Low_complexity 1 29 0 1167 172 36 39 chr2 79983707 79984039 -173272544 + pTR5 LTR ERV1 738 1068 -1370 3892 255 54 16 chr2 79984227 79986380 -173270203 - L1 LINE L1 -2475 4373 2137 2078 244 110 4 chr2 79986374 79986920 -173269663 - L1 LINE L1 -5142 1707 1104 * 460 181 0 0 chr2 79987427 79987521 -173269062 - L1 LINE L1 -1314 4832 4739 22 35 0 0 chr2 79987526 79987555 -173269028 + AT_rich Low_complexity Low_complexity 1 29 0 560 179 60 37 chr2 79987556 79987690 -173268893 - L1PA16 LINE L1 -11 6155 6019 13018 253 24 7 chr2 79987691 79991397 -173265186 - L1P LINE L1 -752 5394 1627 248 353 71 27 chr2 79991670 79991965 -173264618 - L2 LINE L2 -1761 1553 1246 394 320 108 28 chr2 79992260 79992660 -173263923 + L1M4 LINE L1 4405 4836 -1310 23 0 0 0 chr2 79992983 79993006 -173263577 + AT_rich Low_complexity Low_complexity 1 23 0 5670 142 34 19 chr2 79993070 79993602 -173262981 + L1PA13 LINE L1 4693 5215 -948 2045 133 72 17 chr2 79993602 79993947 -173262636 + THE1B LTR MaLR 1 364 0 5670 142 34 19 chr2 79993947 79994473 -173262110 + L1PA13 LINE L1 5215 5791 -372 1712 120 17 4 chr2 79994473 79994714 -173261869 + AluSq SINE Alu 1 244 -69 5670 142 34 19 chr2 79994714 79995074 -173261509 + L1PA13 LINE L1 5791 6144 -19 495 225 55 124 chr2 79995152 79995499 -173261084 + L1MD1 LINE L1 5912 6234 -8 34778 43 30 4 chr2 79995603 79999993 -173256590 + L1P LINE L1 4 4508 -1638 5560 184 68 58 chr2 80000093 80001525 -173255058 - L1MCa LINE L1 -4961 1465 20 307 314 94 83 chr2 80002442 80002923 -173253660 - LTR67 LTR ERVL -64 493 8 1363 202 39 21 chr2 80003109 80003391 -173253192 - AluJo SINE Alu -23 289 3 833 279 62 69 chr2 80003537 80004118 -173252465 - ERVL LTR ERVL -382 5382 4806 437 296 15 22 chr2 80004309 80004444 -173252139 + MIR SINE MIR 15 148 -114 649 356 114 22 chr2 80005498 80005947 -173250636 + L2 LINE L2 2819 3308 -5 318 270 131 50 chr2 80006680 80006939 -173249644 + L1ME LINE L1 4370 4649 -1497 25 31 0 0 chr2 80007056 80007088 -173249495 + AT_rich Low_complexity Low_complexity 1 32 0 25 51 0 0 chr2 80007348 80007387 -173249196 + AT_rich Low_complexity Low_complexity 1 39 0 229 198 66 58 chr2 80007545 80007666 -173248917 - L1ME4a LINE L1 -25 6096 5975 24 0 0 0 chr2 80007768 80007792 -173248791 + AT_rich Low_complexity Low_complexity 1 24 0 303 302 10 0 chr2 80008489 80008585 -173247998 + L1ME LINE L1 5676 5772 -349 273 306 46 27 chr2 80011902 80012062 -173244521 - MIR SINE MIR -64 144 21 27 29 0 0 chr2 80012301 80012335 -173244248 + AT_rich Low_complexity Low_complexity 1 34 0 379 265 110 29 chr2 80012731 80013112 -173243471 - L1ME4a LINE L1 -1 6120 5709 244 291 101 0 chr2 80013465 80013544 -173243039 - L2 LINE L2 0 3272 3186 1409 222 45 60 chr2 80013637 80014101 -173242482 - MLT1C LTR MaLR 0 467 11 1473 305 65 13 chr2 80014332 80014960 -173241623 - L1M2b LINE L1 -6314 895 88 22 35 0 0 chr2 80014963 80014992 -173241591 + AT_rich Low_complexity Low_complexity 1 29 0 3442 230 50 17 chr2 80015042 80016633 -173239950 - L1MCb LINE L1 -4851 1194 5 183 129 0 0 chr2 80017174 80017205 -173239378 + (CATA)n Simple_repeat Simple_repeat 4 34 0 252 337 11 32 chr2 80018468 80018563 -173238020 + MER5B DNA MER1_type 7 99 -79 222 37 0 0 chr2 80018572 80018599 -173237984 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 4300 84 91 0 chr2 80018969 80019574 -173237009 + PABL_A LTR ERV1 1 660 0 1554 217 73 3 chr2 80020379 80020720 -173235863 - MLT1A1 LTR MaLR 0 365 1 253 290 24 48 chr2 80022023 80022147 -173234436 - MIR SINE MIR -75 187 67 810 320 108 14 chr2 80022240 80022593 -173233990 - L2 LINE L2 -514 2800 2415 250 330 102 17 chr2 80023527 80023645 -173232938 + MER5A DNA MER1_type 60 187 -2 181 256 80 56 chr2 80024353 80024478 -173232105 + MIR SINE MIR 129 256 -6 26 98 0 0 chr2 80025090 80025172 -173231411 + AT_rich Low_complexity Low_complexity 1 82 0 596 288 19 44 chr2 80025732 80025937 -173230646 + MIR SINE MIR 47 246 -16 249 254 0 0 chr2 80026007 80026062 -173230521 + L2 LINE L2 3214 3268 -4 487 318 18 18 chr2 80028358 80028528 -173228055 - MLT1I LTR MaLR -16 393 224 2831 236 46 39 chr2 80028540 80029193 -173227390 + L1MB5 LINE L1 1244 1885 -5074 2188 103 13 0 chr2 80029193 80029494 -173227089 + AluY SINE Alu 1 305 -6 2831 236 46 39 chr2 80029494 80029873 -173226710 + L1MB5 LINE L1 1885 2260 -4699 1336 225 39 31 chr2 80029867 80030281 -173226302 + L1MB5 LINE L1 5755 6171 -786 * 273 87 0 3 chr2 80030282 80030322 -173226261 - L1P4 LINE L1 -563 5598 5564 2893 134 5 9 chr2 80030363 80030812 -173225771 + L1PA14 LINE L1 5616 6062 -99 258 238 0 0 chr2 80030811 80030874 -173225709 + L1PA15 LINE L1 6101 6163 -2 * 1846 228 37 24 chr2 80030868 80031376 -173225207 + L1MB5 LINE L1 6164 6678 -307 380 219 59 89 chr2 80031429 80031525 -173225058 + L1M4 LINE L1 4938 5028 -1118 2748 23 0 0 chr2 80031525 80031828 -173224755 - AluYa5 SINE Alu -8 303 1 380 219 59 89 chr2 80031828 80031900 -173224683 + L1M4 LINE L1 5028 5101 -1045 295 244 85 0 chr2 80032077 80032159 -173224424 + L2 LINE L2 3225 3313 0 15095 32 0 1 chr2 80032472 80035055 -173221528 - L1PA3 LINE L1 0 6155 3577 252 167 0 0 chr2 80035582 80035630 -173220953 + T-rich Low_complexity Low_complexity 1 48 0 325 306 16 25 chr2 80036337 80036458 -173220125 + LTR67 LTR ERVL 105 224 -333 2802 19 0 0 chr2 80037377 80037702 -173218881 + L1PA2 LINE L1 5830 6154 -1 286 277 34 47 chr2 80039864 80040012 -173216571 - L1ME4a LINE L1 -20 6101 5956 231 167 0 0 chr2 80040207 80040249 -173216334 + (CATATA)n Simple_repeat Simple_repeat 5 46 0 523 282 57 20 chr2 80040439 80040687 -173215896 - L1ME4a LINE L1 -476 5645 5389 769 271 149 23 chr2 80040905 80041300 -173215283 + LTR16A1 LTR ERVL 1 445 -12 231 214 171 0 chr2 80041741 80041811 -173214772 + LTR30 LTR ERV1 2 83 -639 416 155 62 143 chr2 80041814 80041975 -173214608 + LTR12 LTR ERV1 142 289 -425 274 200 46 100 chr2 80041975 80042105 -173214478 + LTR30 LTR ERV1 556 678 -44 305 258 45 0 chr2 80042105 80042171 -173214412 + LTR12 LTR ERV1 421 489 -225 1784 166 17 10 chr2 80042278 80042574 -173214009 - AluSx SINE Alu -14 298 1 27 49 0 0 chr2 80042677 80042718 -173213865 + AT_rich Low_complexity Low_complexity 1 41 0 345 319 95 25 chr2 80042851 80043092 -173213491 - L1ME4a LINE L1 -1319 4827 4570 202 115 39 58 chr2 80043345 80043397 -173213186 + T-rich Low_complexity Low_complexity 4 54 0 3302 235 55 20 chr2 80043454 80044534 -173212049 - L1M4 LINE L1 -1476 4670 3554 499 179 12 0 chr2 80044534 80044618 -173211965 - MLT1D LTR MaLR -389 116 32 209 303 15 0 chr2 80046030 80046096 -173210487 - L2 LINE L2 0 3313 3247 * 299 213 85 43 chr2 80046092 80046186 -173210397 + L2 LINE L2 3168 3265 -7 429 336 0 14 chr2 80046243 80046383 -173210200 + MIR SINE MIR 2 139 -123 282 207 73 107 chr2 80047038 80047188 -173209395 - MER53 DNA DNA -44 145 1 2486 139 28 13 chr2 80047235 80047630 -173208953 + MSTB LTR MaLR 1 401 -25 397 276 9 9 chr2 80047900 80048016 -173208567 - MIR SINE MIR -51 211 96 1671 200 25 14 chr2 80049092 80049452 -173207131 - MLT1A1 LTR MaLR -1 364 1 24 0 0 0 chr2 80049976 80050000 -173206583 + AT_rich Low_complexity Low_complexity 1 24 0 409 241 84 59 chr2 80050088 80050291 -173206292 + HAL1 LINE L1 4 211 -2296 246 277 15 0 chr2 80050306 80050371 -173206212 + HAL1 LINE L1 277 342 -2165 692 310 103 18 chr2 80050535 80050932 -173205651 + HAL1 LINE L1 499 929 -1578 238 243 18 18 chr2 80050967 80051078 -173205505 + (TA)n Simple_repeat Simple_repeat 1 111 0 32 57 0 0 chr2 80051083 80051136 -173205447 + AT_rich Low_complexity Low_complexity 1 53 0 190 275 38 12 chr2 80051136 80051216 -173205367 + MIR SINE MIR 181 262 0 195 339 188 31 chr2 80052264 80052456 -173204127 + L3 LINE CR1 1307 1528 -49 300 53 0 0 chr2 80053842 80053880 -173202703 + (T)n Simple_repeat Simple_repeat 1 38 0 220 206 0 41 chr2 80053982 80054055 -173202528 + A-rich Low_complexity Low_complexity 6 75 0 306 0 0 0 chr2 80054397 80054431 -173202152 + (TG)n Simple_repeat Simple_repeat 2 35 0 2039 76 0 26 chr2 80054431 80054695 -173201888 - AluSc SINE Alu -50 259 3 3080 209 44 73 chr2 80055632 80057001 -173199582 - L1MC3 LINE L1 -743 5403 4850 513 258 197 12 chr2 80057037 80057281 -173199302 + LTR50 LTR ERVL 476 764 -31 27 0 0 0 chr2 80057330 80057357 -173199226 + AT_rich Low_complexity Low_complexity 1 27 0 2377 116 166 108 chr2 80057846 80058702 -173197881 - pTR5 LTR ERV1 0 1523 49 407 318 37 54 chr2 80059054 80059403 -173197180 - L1M4 LINE L1 -2990 3156 2814 2024 267 103 48 chr2 80060324 80060715 -173195868 - MER69 DNA AcHobo -1343 1183 815 2090 122 6 3 chr2 80060715 80061026 -173195557 - AluSx SINE Alu 0 312 1 2024 267 103 48 chr2 80061026 80061513 -173195070 - MER69 DNA AcHobo -1711 815 256 655 248 190 26 chr2 80061521 80061937 -173194646 - Charlie4a DNA MER1_type -8 500 17 339 327 171 14 chr2 80061946 80062157 -173194426 - MER69 DNA AcHobo -2280 246 3 587 274 88 73 chr2 80062713 80062747 -173193836 + MLT1I LTR MaLR 87 119 -290 903 225 0 72 chr2 80062747 80062983 -173193600 + MER20 DNA MER1_type 1 219 0 587 274 88 73 chr2 80062983 80063134 -173193449 + MLT1I LTR MaLR 119 280 -129 1166 258 129 24 chr2 80063134 80063599 -173192984 - LTR40a LTR ERVL -3 516 3 587 274 88 73 chr2 80063599 80063686 -173192897 + MLT1I LTR MaLR 280 364 -45 22 0 0 0 chr2 80064374 80064396 -173192187 + AT_rich Low_complexity Low_complexity 1 22 0 260 252 103 78 chr2 80065033 80065275 -173191308 + MER112 DNA MER1_type 13 260 0 757 245 10 60 chr2 80065536 80065736 -173190847 - MER20 DNA MER1_type -27 192 3 774 105 0 0 chr2 80066147 80066261 -173190322 + (TTTC)n Simple_repeat Simple_repeat 1 114 0 207 346 77 0 chr2 80066272 80066350 -173190233 - L2 LINE L2 -52 3220 3137 1003 206 0 0 chr2 80067538 80067756 -173188827 - L1MA6 LINE L1 -12 6288 6071 21 0 0 0 chr2 80068317 80068338 -173188245 + AT_rich Low_complexity Low_complexity 1 21 0 375 299 31 16 chr2 80068389 80068516 -173188067 - MIR SINE MIR -129 133 5 1763 171 20 3 chr2 80069160 80069453 -173187130 + AluSx SINE Alu 1 298 -14 43641 41 0 8 chr2 80069516 80075715 -173180868 - L1PA3 LINE L1 -1 6154 2 600 242 68 12 chr2 80075715 80075967 -173180616 - LTR37B LTR ERV1 -5 463 198 21 71 0 0 chr2 80076268 80076310 -173180273 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr2 80076395 80076417 -173180166 + AT_rich Low_complexity Low_complexity 1 22 0 667 276 46 10 chr2 80077104 80077300 -173179283 + MLT1I LTR MaLR 205 407 -2 243 61 0 0 chr2 80077342 80077375 -173179208 + (A)n Simple_repeat Simple_repeat 1 33 0 928 238 5 5 chr2 80077396 80077585 -173178998 - MER5A DNA MER1_type 0 189 1 453 301 55 0 chr2 80078999 80079145 -173177438 - MIR SINE MIR -6 256 103 1874 246 102 53 chr2 80080044 80080738 -173175845 - MER21B LTR ERV1 -125 738 11 2716 138 28 19 chr2 80082767 80083237 -173173346 + MER31A LTR ERV1 5 478 -7 365 247 62 62 chr2 80083598 80083744 -173172839 - MLT1J2 LTR MaLR -299 147 2 243 0 0 0 chr2 80083883 80083910 -173172673 + (TG)n Simple_repeat Simple_repeat 2 28 0 186 71 0 0 chr2 80084243 80084271 -173172312 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1435 215 45 20 chr2 80084271 80084625 -173171958 - LTR52 LTR ERVL -58 363 1 2100 136 0 13 chr2 80084989 80085305 -173171278 - AluSx SINE Alu 0 312 1 2305 110 3 0 chr2 80085355 80085663 -173170920 - AluSp SINE Alu -4 309 1 800 174 62 46 chr2 80085690 80085885 -173170698 - L1MB1 LINE L1 -12 6156 5959 922 184 30 0 chr2 80086244 80086412 -173170171 + FAM SINE Alu 1 173 -12 332 311 45 15 chr2 80086419 80086551 -173170032 - L3 LINE CR1 -37 1540 1405 1633 128 51 25 chr2 80086658 80086932 -173169651 - MER4A LTR ERV1 0 664 384 528 135 42 21 chr2 80086982 80087078 -173169505 - MER4A LTR ERV1 -566 98 1 247 325 126 31 chr2 80087108 80087299 -173169284 + L2 LINE L2 2144 2352 -962 424 260 203 16 chr2 80087530 80087722 -173168861 + MIR SINE MIR 31 258 -4 190 350 25 50 chr2 80087956 80088076 -173168507 + L2 LINE L2 2762 2878 -436 216 240 20 0 chr2 80088316 80088366 -173168217 + L2 LINE L2 3263 3313 0 352 281 65 13 chr2 80088891 80089044 -173167539 + MER103 DNA DNA 3 163 -3 999 264 34 58 chr2 80089416 80089795 -173166788 + MLT1A2 LTR MaLR 1 370 -4 512 245 20 7 chr2 80090706 80090857 -173165726 + MER103 DNA DNA 8 160 -6 529 200 80 0 chr2 80091149 80091274 -173165309 + MER5A DNA MER1_type 1 135 -54 243 156 13 26 chr2 80092024 80092101 -173164482 + (TA)n Simple_repeat Simple_repeat 1 76 0 2734 26 0 0 chr2 80092782 80093090 -173163493 + AluY SINE Alu 1 308 -3 23 0 0 0 chr2 80093754 80093777 -173162806 + AT_rich Low_complexity Low_complexity 1 23 0 2754 87 5 16 chr2 80093825 80094204 -173162379 - THE1C LTR MaLR 0 375 1 26 64 0 0 chr2 80094392 80094439 -173162144 + AT_rich Low_complexity Low_complexity 1 47 0 326 269 129 16 chr2 80095853 80096046 -173160537 + L1MC4a LINE L1 5712 5926 -1882 21 57 0 0 chr2 80096046 80096081 -173160502 + AT_rich Low_complexity Low_complexity 1 35 0 834 254 172 18 chr2 80096609 80097227 -173159356 + LTR50 LTR ERVL 1 791 -4 490 226 72 51 chr2 80097317 80097512 -173159071 + LTR37B LTR ERV1 247 445 -23 499 217 122 42 chr2 80097567 80097756 -173158827 - MER112 DNA MER1_type -1 259 56 180 263 40 26 chr2 80098817 80098893 -173157690 - MIR3 SINE MIR -5 203 127 197 263 18 18 chr2 80099858 80099915 -173156668 + MIR SINE MIR 97 153 -109 1632 183 10 3 chr2 80101318 80101613 -173154970 - AluJo SINE Alu -1 311 15 243 333 50 35 chr2 80102980 80103121 -173153462 - MIR SINE MIR -71 191 49 28 29 0 0 chr2 80103941 80103976 -173152607 + AT_rich Low_complexity Low_complexity 1 35 0 185 329 63 13 chr2 80104033 80104112 -173152471 - L2 LINE L2 -6 3266 3184 203 196 43 0 chr2 80105142 80105188 -173151395 + CT-rich Low_complexity Low_complexity 1 48 0 360 0 0 0 chr2 80105579 80105619 -173150964 + (A)n Simple_repeat Simple_repeat 1 40 0 203 196 0 18 chr2 80105845 80105901 -173150682 + A-rich Low_complexity Low_complexity 1 55 0 872 328 102 13 chr2 80107292 80107844 -173148739 + L2 LINE L2 2696 3292 -21 228 297 188 0 chr2 80109324 80109388 -173147195 + MER45 DNA AcHobo 2 77 -963 225 0 0 0 chr2 80110229 80110254 -173146329 + (TTTC)n Simple_repeat Simple_repeat 2 26 0 510 125 0 0 chr2 80110285 80110365 -173146218 + (TCC)n Simple_repeat Simple_repeat 3 82 0 1479 103 5 5 chr2 80110530 80110733 -173145850 + AluSq SINE Alu 94 296 -17 25 31 0 0 chr2 80111084 80111116 -173145467 + AT_rich Low_complexity Low_complexity 1 32 0 1675 165 118 21 chr2 80111306 80111730 -173144853 - L1MC3 LINE L1 -8 7777 7313 889 126 55 6 chr2 80111761 80111944 -173144639 + Tigger3(Golem) DNA MER2_type 2374 2565 -464 1326 207 88 6 chr2 80111996 80112315 -173144268 - MER2 DNA MER2_type 0 345 1 348 24 0 0 chr2 80112350 80112391 -173144192 + (CA)n Simple_repeat Simple_repeat 2 42 0 346 251 117 37 chr2 80113130 80113293 -173143290 + L1ME4a LINE L1 5946 6121 0 1839 103 71 7 chr2 80114055 80114336 -173142247 + AluSq SINE Alu 1 299 -14 509 121 0 64 chr2 80114339 80114480 -173142103 + (GAAA)n Simple_repeat Simple_repeat 1 132 0 2046 128 30 0 chr2 80114483 80114780 -173141803 + AluSg SINE Alu 1 306 -4 843 86 0 0 chr2 80114920 80115037 -173141546 + (TA)n Simple_repeat Simple_repeat 2 118 0 303 295 55 51 chr2 80115308 80115562 -173141021 - L1MC/D LINE L1 -2245 5563 5309 2026 116 3 35 chr2 80115810 80116121 -173140462 - AluSq SINE Alu -10 303 3 225 0 0 0 chr2 80116585 80116610 -173139973 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 280 284 23 0 chr2 80116666 80116754 -173139829 - LTR43 LTR ERV1 -289 313 224 26 98 0 0 chr2 80117693 80117775 -173138808 + AT_rich Low_complexity Low_complexity 1 82 0 232 126 11 46 chr2 80117793 80117880 -173138703 + (TA)n Simple_repeat Simple_repeat 1 84 0 2278 220 51 24 chr2 80118304 80118849 -173137734 - MER68 LTR ERV1 0 562 3 8180 168 28 13 chr2 80118886 80120846 -173135737 - L1M2 LINE L1 -622 5669 3679 6431 31 0 1 chr2 80120831 80121592 -173134991 - L1PA2 LINE L1 0 6155 5396 * 1662 142 50 7 chr2 80122526 80122808 -173133775 + MER49 LTR ERV1 1 294 -629 236 290 0 16 chr2 80122814 80122876 -173133707 + MER4E LTR ERV1 105 165 -614 1260 278 3 17 chr2 80122887 80123247 -173133336 + MER4D LTR ERV1 549 903 0 28 86 0 0 chr2 80123685 80123755 -173132828 + AT_rich Low_complexity Low_complexity 1 70 0 438 318 49 58 chr2 80126231 80126596 -173129987 + L2 LINE L2 2885 3246 -67 447 192 144 41 chr2 80128598 80128744 -173127839 + MER96 DNA MER1_type? 6 166 -9 1084 237 4 17 chr2 80128792 80129028 -173127555 + MER8 DNA MER2_type 7 239 0 1567 139 0 4 chr2 80129501 80129739 -173126844 - AluSq SINE Alu -76 237 1 2075 100 0 11 chr2 80130513 80130794 -173125789 + AluSc SINE Alu 1 278 -31 1749 102 30 0 chr2 80130795 80131031 -173125552 + AluY SINE Alu 49 291 -20 34191 33 1 0 chr2 80131536 80136025 -173120558 + L1P1 LINE L1 1216 5709 -446 34385 42 82 1 chr2 80136136 80140980 -173115603 - L1P LINE L1 -961 5185 3 393 189 0 0 chr2 80140978 80141052 -173115531 - L1M2 LINE L1 -2444 3702 3629 * 744 128 45 23 chr2 80141051 80141184 -173115399 + L1M2 LINE L1 5647 5782 -509 275 231 0 13 chr2 80141184 80141262 -173115321 + (TATATG)n Simple_repeat Simple_repeat 3 79 0 3977 33 8 0 chr2 80141427 80141937 -173114646 - L1P LINE L1 -2669 3477 2964 4399 33 0 0 chr2 80141937 80142473 -173114110 + L1PA3 LINE L1 5623 6159 0 290 347 53 0 chr2 80144298 80144393 -173112190 - L2 LINE L2 -1 3271 3172 5771 24 0 0 chr2 80145135 80145805 -173110778 + L1PA4 LINE L1 5483 6152 -3 1647 225 92 20 chr2 80146332 80146776 -173109807 + MLT2B1 LTR ERVL 1 476 -44 1347 133 27 9 chr2 80146816 80147041 -173109542 - Tigger5 DNA MER2_type -42 2281 2053 738 92 0 34 chr2 80147091 80147210 -173109373 - L1PA8 LINE L1 0 6172 6058 604 256 25 6 chr2 80148068 80148228 -173108355 + MER5B DNA MER1_type 11 173 -5 635 197 0 0 chr2 80149816 80149933 -173106650 + FLAM_C SINE Alu 4 120 -23 1153 264 14 46 chr2 80150370 80150718 -173105865 + MLT1A2 LTR MaLR 3 339 -35 2807 222 47 140 chr2 80150753 80150956 -173105627 + MLT1A2-int LTR MaLR 1 221 -1150 382 188 0 0 chr2 80150956 80151020 -173105563 - MER20 DNA MER1_type -54 165 102 2807 222 47 140 chr2 80151020 80151485 -173105098 + MLT1A2-int LTR MaLR 221 728 -643 2339 84 0 0 chr2 80151485 80151795 -173104788 + AluY SINE Alu 1 310 -1 2807 222 47 140 chr2 80151795 80152567 -173104016 + MLT1A2-int LTR MaLR 728 1364 -7 893 249 44 83 chr2 80152580 80152941 -173103642 + MLT1B LTR MaLR 44 390 0 764 296 73 62 chr2 80153629 80153845 -173102738 + LTR33 LTR ERVL 19 231 -290 926 190 46 37 chr2 80153845 80154061 -173102522 + MER20 DNA MER1_type 1 218 -1 764 296 73 62 chr2 80154061 80154340 -173102243 + LTR33 LTR ERVL 231 519 -2 646 268 21 16 chr2 80154441 80154631 -173101952 - MIR SINE MIR -2 260 70 217 333 11 0 chr2 80154816 80154906 -173101677 + CT-rich Low_complexity Low_complexity 2 92 0 200 200 0 0 chr2 80156657 80156697 -173099886 + A-rich Low_complexity Low_complexity 5 44 0 349 256 198 8 chr2 80156770 80156891 -173099692 + MER5A DNA MER1_type 46 189 0 537 235 44 0 chr2 80157045 80157181 -173099402 + MER5A DNA MER1_type 30 171 -18 213 121 0 0 chr2 80158778 80158811 -173097772 + (A)n Simple_repeat Simple_repeat 1 33 0 1562 188 45 28 chr2 80159162 80159519 -173097064 + MLT1A1 LTR MaLR 1 363 -2 473 182 41 41 chr2 80159683 80159804 -173096779 + MER67D LTR ERV1 26 146 -368 1185 152 116 16 chr2 80159805 80160055 -173096528 + MER44D DNA MER2_type 1 545 -64 636 140 0 0 chr2 80160045 80160138 -173096445 + 5S rRNA rRNA 1 93 -28 * 304 273 26 0 chr2 80160131 80160208 -173096375 + MER44D DNA MER2_type 527 605 0 * 1411 214 83 12 chr2 80160234 80160571 -173096012 + MER67D LTR ERV1 154 514 0 47 0 0 57 chr2 80160748 80160818 -173095765 + AT_rich Low_complexity Low_complexity 1 66 0 6085 149 33 14 chr2 80161120 80161315 -173095268 - Tigger2 DNA MER2_type -5 2713 2523 2131 109 0 22 chr2 80161315 80161626 -173094957 - AluSc SINE Alu -5 304 1 6085 149 33 14 chr2 80161626 80162468 -173094115 - Tigger2 DNA MER2_type -195 2523 1657 292 120 40 0 chr2 80162570 80162620 -173093963 + MER2 DNA MER2_type 205 256 -89 301 167 0 0 chr2 80162694 80162760 -173093823 + L1MA8 LINE L1 6221 6286 -5 635 257 28 14 chr2 80163121 80163335 -173093248 + MER20 DNA MER1_type 3 219 0 394 261 9 18 chr2 80164589 80164700 -173091883 - MER58B DNA MER1_type -2 339 230 544 271 71 20 chr2 80165017 80165365 -173091218 + L1MEc LINE L1 34 436 -5960 662 261 133 0 chr2 80167404 80167607 -173088976 - MIR SINE MIR -2 260 31 244 273 30 106 chr2 80168771 80168903 -173087680 - MER91A DNA MER1_type -4 192 71 288 268 37 0 chr2 80168987 80169069 -173087514 + MIR SINE MIR 68 152 -110 186 239 56 42 chr2 80169940 80170011 -173086572 - MIR SINE MIR 0 262 191 773 248 182 8 chr2 80170012 80170375 -173086208 - LTR37A LTR ERV1 0 426 1 351 67 0 0 chr2 80173593 80173638 -173082945 - Tigger2 DNA MER2_type -1783 935 891 1024 152 49 5 chr2 80174424 80174628 -173081955 + L1MB3 LINE L1 5971 6183 0 1156 148 75 20 chr2 80175187 80175539 -173081044 + Tigger2 DNA MER2_type 1 464 -2254 * 4136 134 4 27 chr2 80175538 80176238 -173080345 + Tigger2 DNA MER2_type 566 1249 -1469 6737 65 134 2 chr2 80176238 80177229 -173079354 + L1P LINE L1 25 1146 -5000 1939 116 0 34 chr2 80178764 80179107 -173077476 + AluSx SINE Alu 1 333 0 22 80 0 0 chr2 80179501 80179551 -173077032 + AT_rich Low_complexity Low_complexity 1 50 0 437 309 64 16 chr2 80179885 80180073 -173076510 + L2 LINE L2 2154 2350 -964 207 0 0 0 chr2 80180637 80180660 -173075923 + (A)n Simple_repeat Simple_repeat 1 23 0 229 250 0 0 chr2 80181897 80181945 -173074638 + (CA)n Simple_repeat Simple_repeat 1 48 0 28 29 0 0 chr2 80182463 80182498 -173074085 + AT_rich Low_complexity Low_complexity 1 35 0 339 25 0 0 chr2 80182567 80182607 -173073976 + (CA)n Simple_repeat Simple_repeat 2 41 0 196 305 137 32 chr2 80183129 80183224 -173073359 + L3 LINE CR1 1472 1576 -1 335 345 46 47 chr2 80183781 80184150 -173072433 - MER115 DNA AcHobo -254 439 35 210 314 67 48 chr2 80186683 80186788 -173069795 - MIR SINE MIR -108 154 48 1857 334 53 33 chr2 80186949 80188117 -173068466 + L2 LINE L2 1736 3298 -15 1182 200 65 52 chr2 80188735 80189120 -173067463 - LTR37A LTR ERV1 -33 393 4 185 0 40 0 chr2 80190298 80190323 -173066260 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 210 313 150 66 chr2 80192891 80193463 -173063120 - L2 LINE L2 -1372 1942 1323 427 313 7 7 chr2 80193765 80193909 -173062674 + MIR SINE MIR 75 218 -44 325 224 203 28 chr2 80195495 80195638 -173060945 + MIR SINE MIR 32 199 -63 369 0 0 0 chr2 80196252 80196293 -173060290 + (A)n Simple_repeat Simple_repeat 1 41 0 186 191 0 0 chr2 80196344 80196386 -173060197 + G-rich Low_complexity Low_complexity 1 42 0 32 0 0 0 chr2 80196537 80196569 -173060014 + AT_rich Low_complexity Low_complexity 1 32 0 350 298 57 28 chr2 80196965 80197106 -173059477 + MIR3 SINE MIR 21 165 -43 180 0 0 0 chr2 80197178 80197198 -173059385 + (T)n Simple_repeat Simple_repeat 1 20 0 242 301 11 11 chr2 80197476 80197569 -173059014 - MIR SINE MIR -4 258 166 281 198 10 146 chr2 80199940 80200036 -173056547 + MER63 DNA MER1_type 33 741 -95 781 267 93 78 chr2 80200142 80200655 -173055928 - L2 LINE L2 -9 3304 2791 2105 138 0 0 chr2 80201417 80201729 -173054854 + AluSx SINE Alu 1 312 0 418 320 101 40 chr2 80201796 80202193 -173054390 + L1ME4a LINE L1 5483 5903 -218 233 255 19 47 chr2 80202257 80202363 -173054220 + L1ME4a LINE L1 6018 6120 -1 21 36 0 0 chr2 80202432 80202460 -173054123 + AT_rich Low_complexity Low_complexity 1 28 0 1937 151 40 117 chr2 80202474 80202724 -173053859 + Tigger2a DNA MER2_type 1 200 -2508 216 24 48 24 chr2 80202724 80202766 -173053817 + (TA)n Simple_repeat Simple_repeat 2 44 0 1937 151 40 117 chr2 80202766 80202985 -173053598 + Tigger2a DNA MER2_type 200 434 0 1162 252 19 78 chr2 80203508 80203920 -173052663 + MLT2B1 LTR ERVL 1 388 -132 637 320 40 8 chr2 80204609 80204856 -173051727 + MIR SINE MIR 8 262 0 201 337 10 41 chr2 80204882 80204980 -173051603 - MIR SINE MIR -79 129 35 234 91 0 0 chr2 80205973 80206006 -173050577 + (TG)n Simple_repeat Simple_repeat 2 34 0 21 36 0 0 chr2 80206294 80206322 -173050261 + AT_rich Low_complexity Low_complexity 1 28 0 207 211 0 0 chr2 80208046 80208084 -173048499 + (CA)n Simple_repeat Simple_repeat 1 38 0 264 320 64 24 chr2 80208891 80209016 -173047567 - MIR SINE MIR -123 139 10 710 354 97 20 chr2 80209410 80209798 -173046785 + L3 LINE CR1 1090 1447 -130 2270 90 3 10 chr2 80209798 80210099 -173046484 + AluSp SINE Alu 1 299 -14 710 354 97 20 chr2 80210099 80210142 -173046441 + L3 LINE CR1 1447 1485 -92 1467 151 7 61 chr2 80210142 80210421 -173046162 - AluJb SINE Alu -11 301 38 1512 72 3 6 chr2 80212123 80212305 -173044278 - L1ME LINE L1 -363 5799 5620 2651 76 8 3 chr2 80212305 80212661 -173043922 + L1PA8 LINE L1 5806 6163 -9 1512 72 3 6 chr2 80212661 80212696 -173043887 - L1ME LINE L1 -542 5620 5586 2368 82 0 0 chr2 80214451 80214745 -173041838 + AluSc SINE Alu 1 294 -15 34 72 0 0 chr2 80215254 80215323 -173041260 + AT_rich Low_complexity Low_complexity 1 69 0 183 267 140 40 chr2 80215464 80215614 -173040969 - L3 LINE CR1 -1291 286 122 205 235 102 41 chr2 80216705 80216803 -173039780 - MIR3 SINE MIR -39 169 66 1809 257 63 46 chr2 80216976 80217559 -173039024 + MLT1E LTR MaLR 1 593 0 2045 194 28 28 chr2 80218097 80218529 -173038054 + MSTB1 LTR MaLR 1 432 0 549 187 24 12 chr2 80218791 80218957 -173037626 + (TA)n Simple_repeat Simple_repeat 1 168 0 298 383 52 62 chr2 80219526 80219894 -173036689 + L2 LINE L2 2907 3270 -2 476 299 29 29 chr2 80219935 80220176 -173036407 - L1ME4a LINE L1 -256 5865 5625 203 234 215 37 chr2 80222327 80222434 -173034149 - MER5C DNA MER1_type -190 134 9 257 308 0 27 chr2 80223190 80223336 -173033247 + HAL1 LINE L1 1132 1273 -1234 12758 160 29 14 chr2 80223355 80224005 -173032578 + Tigger1 DNA MER2_type 4 643 -1775 1846 131 0 39 chr2 80224005 80224311 -173032272 + AluSx SINE Alu 2 295 -17 12758 160 29 14 chr2 80224311 80226037 -173030546 + Tigger1 DNA MER2_type 643 2415 -3 339 270 70 60 chr2 80226249 80226334 -173030249 + HAL1 LINE L1 1482 1565 -942 1591 137 63 13 chr2 80226334 80226649 -173029934 + L1MA5A LINE L1 5961 6291 -6 339 270 70 60 chr2 80226649 80226748 -173029835 + HAL1 LINE L1 1565 1668 -839 25 0 0 0 chr2 80227733 80227758 -173028825 + AT_rich Low_complexity Low_complexity 1 25 0 1033 197 0 58 chr2 80227832 80228040 -173028543 + AluJo SINE Alu 1 196 -116 280 304 80 36 chr2 80228657 80228795 -173027788 + L2 LINE L2 3161 3304 -9 1144 174 68 9 chr2 80229309 80229528 -173027055 - AluJo SINE Alu -80 232 1 420 284 66 38 chr2 80229564 80229747 -173026836 - MIR SINE MIR -15 247 60 436 278 137 17 chr2 80230115 80230349 -173026234 + L1ME LINE L1 5554 5815 -306 205 313 240 0 chr2 80230719 80230815 -173025768 + L2 LINE L2 3148 3266 -6 2479 43 0 10 chr2 80230885 80231187 -173025396 - AluY SINE Alu -12 299 1 423 353 97 23 chr2 80231903 80232591 -173023992 + L1M4 LINE L1 4129 4867 -1279 182 88 0 29 chr2 80232912 80232946 -173023637 + (TA)n Simple_repeat Simple_repeat 1 33 0 267 186 8 42 chr2 80232991 80233109 -173023474 + (TA)n Simple_repeat Simple_repeat 2 115 0 232 192 0 0 chr2 80233462 80233514 -173023069 + L1MC4 LINE L1 6649 6700 -1342 203 204 19 0 chr2 80233523 80233577 -173023006 + (TA)n Simple_repeat Simple_repeat 2 56 0 23 33 0 0 chr2 80234054 80234084 -173022499 + AT_rich Low_complexity Low_complexity 1 30 0 245 98 24 0 chr2 80235235 80235276 -173021307 + (GA)n Simple_repeat Simple_repeat 2 43 0 217 247 11 65 chr2 80235625 80235718 -173020865 - MIR SINE MIR -115 93 6 362 303 46 6 chr2 80237030 80237205 -173019378 + L1M4 LINE L1 4877 5058 -1088 25 31 0 0 chr2 80237508 80237540 -173019043 + AT_rich Low_complexity Low_complexity 1 32 0 35 41 0 0 chr2 80238833 80238882 -173017701 + AT_rich Low_complexity Low_complexity 1 49 0 268 382 26 13 chr2 80239530 80239682 -173016901 + L3 LINE CR1 1323 1476 -101 22 70 0 0 chr2 80240411 80240454 -173016129 + AT_rich Low_complexity Low_complexity 1 43 0 231 61 0 0 chr2 80241625 80241658 -173014925 + (CA)n Simple_repeat Simple_repeat 1 33 0 872 113 0 0 chr2 80243866 80243999 -173012584 + AluSp/q SINE Alu 174 306 -7 21 57 0 0 chr2 80244211 80244246 -173012337 + AT_rich Low_complexity Low_complexity 1 35 0 21 71 0 0 chr2 80244253 80244295 -173012288 + AT_rich Low_complexity Low_complexity 1 42 0 837 312 128 19 chr2 80244616 80244734 -173011849 - L2 LINE L2 -4 3309 3205 360 0 0 0 chr2 80244734 80244774 -173011809 + (CA)n Simple_repeat Simple_repeat 1 40 0 837 312 128 19 chr2 80244774 80245078 -173011505 - L2 LINE L2 -108 3205 2841 207 338 38 0 chr2 80245221 80245301 -173011282 + L2 LINE L2 3187 3269 -44 1830 159 0 17 chr2 80245369 80245659 -173010924 + AluSx SINE Alu 3 287 -25 254 299 203 0 chr2 80245817 80246004 -173010579 + L2 LINE L2 3089 3313 0 407 270 66 24 chr2 80246042 80246253 -173010330 + L1ME4a LINE L1 5666 5885 -236 2836 94 5 21 chr2 80246455 80246882 -173009701 - L1PA10 LINE L1 -1 6167 5748 254 266 18 64 chr2 80247323 80247432 -173009151 - MLT1E2 LTR MaLR -517 109 6 21 71 0 0 chr2 80247741 80247783 -173008800 + AT_rich Low_complexity Low_complexity 1 42 0 935 107 0 0 chr2 80248510 80248632 -173007951 + AluY SINE Alu 1 122 -189 217 119 30 75 chr2 80248633 80248675 -173007908 + A-rich Low_complexity Low_complexity 3 42 -24 2079 133 0 0 chr2 80248675 80248983 -173007600 + AluY SINE Alu 1 308 -3 217 119 30 75 chr2 80248983 80249007 -173007576 + A-rich Low_complexity Low_complexity 42 66 0 181 288 0 55 chr2 80249055 80249128 -173007455 + L3 LINE CR1 757 825 -752 195 274 129 24 chr2 80249439 80249563 -173007020 - MIR SINE MIR -51 211 75 187 270 0 40 chr2 80250217 80250291 -173006292 + MIR SINE MIR 149 219 -43 769 43 0 0 chr2 80250302 80250394 -173006189 + L1PA3 LINE L1 1 92 -6054 38699 36 2 2 chr2 80250394 80255932 -173000651 + L1PA3 LINE L1 617 6155 0 295 202 22 0 chr2 80257045 80257134 -172999449 + GA-rich Low_complexity Low_complexity 2 92 0 315 113 0 0 chr2 80257239 80257292 -172999291 + (TG)n Simple_repeat Simple_repeat 2 54 0 1985 74 37 0 chr2 80257369 80257640 -172998943 - AluY SINE Alu -30 281 1 367 313 90 57 chr2 80257764 80258033 -172998550 - L1ME LINE L1 -316 5805 5521 2160 147 56 7 chr2 80258033 80258441 -172998142 + MSTA LTR MaLR 1 428 0 367 313 90 57 chr2 80258441 80258503 -172998080 - L1ME LINE L1 -600 5521 5463 1984 146 3 0 chr2 80258965 80259260 -172997323 - AluSx SINE Alu -16 296 1 39 68 0 0 chr2 80259401 80259475 -172997108 + AT_rich Low_complexity Low_complexity 1 74 0 22 0 0 0 chr2 80259675 80259697 -172996886 + AT_rich Low_complexity Low_complexity 1 22 0 312 313 19 44 chr2 80261425 80261585 -172994998 + HAL1 LINE L1 1112 1267 -1240 1338 66 16 11 chr2 80261650 80261833 -172994750 + AluY SINE Alu 126 309 -2 21 0 0 0 chr2 80262185 80262206 -172994377 + AT_rich Low_complexity Low_complexity 1 21 0 825 318 18 0 chr2 80262487 80262707 -172993876 - MER58A DNA MER1_type 0 224 1 239 213 213 66 chr2 80264092 80264214 -172992369 + MLT1J LTR MaLR 37 176 -335 1781 224 38 102 chr2 80264309 80264937 -172991646 - MER77 LTR ERV1 -15 590 3 309 257 38 86 chr2 80264937 80265034 -172991549 + MLT1L LTR MaLR 329 420 -195 22 0 0 0 chr2 80266242 80266264 -172990319 + AT_rich Low_complexity Low_complexity 1 22 0 2896 190 138 77 chr2 80266324 80266880 -172989703 - L1MC3 LINE L1 -22 7763 7242 269 306 0 0 chr2 80266880 80266952 -172989631 - MLT1F1 LTR MaLR -443 124 53 2896 190 138 77 chr2 80266952 80267323 -172989260 - L1MC3 LINE L1 -543 7242 6704 2286 211 38 15 chr2 80267314 80267600 -172988983 + L1MA9 LINE L1 5636 5941 -371 * 1687 154 164 29 chr2 80267600 80267977 -172988606 - MSTA LTR MaLR 0 428 1 2286 211 38 15 chr2 80267977 80268217 -172988366 + L1MA9 LINE L1 5941 6174 -138 21 0 0 0 chr2 80268363 80268384 -172988199 + AT_rich Low_complexity Low_complexity 1 21 0 950 167 0 6 chr2 80268698 80268866 -172987717 - MER63 DNA MER1_type 0 1062 896 243 248 62 18 chr2 80268932 80269045 -172987538 - L1MC5 LINE L1 -50 7911 7794 180 77 0 0 chr2 80270180 80270206 -172986377 + (CA)n Simple_repeat Simple_repeat 2 27 0 342 286 38 0 chr2 80270388 80270493 -172986090 + MLT1E LTR MaLR 55 163 -430 * 1791 251 82 8 chr2 80270461 80270972 -172985611 + MLT1E1 LTR MaLR 104 652 -2 1538 211 79 8 chr2 80271901 80272270 -172984313 + MSTD LTR MaLR 1 395 -1 251 240 71 58 chr2 80272888 80273072 -172983511 + MLT1L LTR MaLR 401 613 -2 181 222 0 0 chr2 80273510 80273546 -172983037 + L2 LINE L2 3270 3305 -8 21 36 0 0 chr2 80274281 80274309 -172982274 + AT_rich Low_complexity Low_complexity 1 28 0 459 266 105 0 chr2 80274756 80274880 -172981703 + MER58B DNA MER1_type 202 338 -3 315 0 0 0 chr2 80275345 80275380 -172981203 + (TG)n Simple_repeat Simple_repeat 2 36 0 251 321 119 15 chr2 80276065 80276199 -172980384 + MIR SINE MIR 2 149 -113 274 294 18 9 chr2 80278081 80278190 -172978393 + (TA)n Simple_repeat Simple_repeat 1 110 0 986 32 0 32 chr2 80278257 80278382 -172978201 - L1PA7 LINE L1 -4 6150 6030 928 245 0 19 chr2 80279916 80280128 -172976455 + MER63A DNA MER1_type 2 209 -1 263 231 0 0 chr2 80280161 80280213 -172976370 + L2 LINE L2 3218 3269 -3 5271 86 16 0 chr2 80280654 80281391 -172975192 - L1P LINE L1 -1383 4763 4015 4881 59 5 0 chr2 80281391 80282011 -172974572 + L1PA7 LINE L1 5529 6154 0 2371 83 3 3 chr2 80282085 80282397 -172974186 + AluSx SINE Alu 1 312 0 1881 99 11 7 chr2 80283005 80283278 -172973305 - AluSg SINE Alu -36 274 1 23 0 0 0 chr2 80283281 80283304 -172973279 + AT_rich Low_complexity Low_complexity 1 23 0 22 56 0 0 chr2 80283796 80283832 -172972751 + AT_rich Low_complexity Low_complexity 1 36 0 435 333 145 16 chr2 80284582 80284900 -172971683 - MLT1J2 LTR MaLR 0 450 92 4188 139 4 0 chr2 80285391 80286068 -172970515 + L1PA13 LINE L1 5482 6161 -2 22 0 0 0 chr2 80286718 80286740 -172969843 + AT_rich Low_complexity Low_complexity 1 22 0 6511 78 17 0 chr2 80286740 80287772 -172968811 - L1PA7 LINE L1 -13 6141 5103 261 0 0 0 chr2 80288089 80288118 -172968465 + (TG)n Simple_repeat Simple_repeat 2 30 0 447 294 7 65 chr2 80288501 80288654 -172967929 - MER5B DNA MER1_type -2 176 33 1519 91 5 0 chr2 80288654 80288863 -172967720 + AluY SINE Alu 88 297 -14 197 239 43 0 chr2 80288872 80288918 -172967665 + MER5B DNA MER1_type 130 177 -1 435 358 78 44 chr2 80289039 80289447 -172967136 + L2 LINE L2 2267 2688 -626 348 365 94 58 chr2 80289529 80289943 -172966640 + L2 LINE L2 2844 3272 0 228 67 0 0 chr2 80291167 80291197 -172965386 + (TG)n Simple_repeat Simple_repeat 2 31 0 274 315 63 42 chr2 80292678 80292821 -172963762 - MIR SINE MIR -70 192 47 24 32 0 0 chr2 80292893 80292924 -172963659 + AT_rich Low_complexity Low_complexity 1 31 0 274 336 31 31 chr2 80294866 80294994 -172961589 - L2 LINE L2 -186 3086 2959 3816 61 8 0 chr2 80297033 80297527 -172959056 - L1PA8 LINE L1 -6 6166 5669 392 241 45 0 chr2 80297546 80297658 -172958925 - L1 LINE L1 -1880 4266 4150 4473 166 70 5 chr2 80297659 80298579 -172958004 + L1PA16 LINE L1 5191 6166 0 308 374 26 18 chr2 80298639 80298866 -172957717 + L1M3c LINE L1 177 405 -5908 264 314 21 36 chr2 80299139 80299279 -172957304 + L1M3c LINE L1 669 806 -5497 2339 256 124 41 chr2 80299449 80300972 -172955611 + L1M3c LINE L1 802 2325 -4059 1357 230 31 31 chr2 80300974 80301331 -172955252 + MLT1A1 LTR MaLR 7 363 -2 629 253 22 39 chr2 80301332 80301586 -172954997 + L1MEc LINE L1 2179 2403 -3812 * 2341 223 46 29 chr2 80301584 80302381 -172954202 + L1MEc LINE L1 2781 3591 -2624 2018 215 37 0 chr2 80302379 80302834 -172953749 + L1MB1 LINE L1 5694 6165 -3 * 294 206 0 0 chr2 80303303 80303371 -172953212 + (TATATG)n Simple_repeat Simple_repeat 5 72 0 326 235 59 0 chr2 80305217 80305319 -172951264 - MER97b DNA MER1_type? -874 179 72 25 90 0 0 chr2 80305745 80305812 -172950771 + AT_rich Low_complexity Low_complexity 1 67 0 22 56 0 0 chr2 80306379 80306415 -172950168 + AT_rich Low_complexity Low_complexity 1 36 0 239 389 30 18 chr2 80307023 80307190 -172949393 + MIR3 SINE MIR 30 198 -10 36 94 0 0 chr2 80308016 80308122 -172948461 + AT_rich Low_complexity Low_complexity 1 106 0 276 269 52 7 chr2 80308826 80308985 -172947598 + L1P5 LINE L1 5299 5443 -711 35 24 0 0 chr2 80309279 80309321 -172947262 + AT_rich Low_complexity Low_complexity 1 42 0 22 35 0 0 chr2 80309348 80309377 -172947206 + AT_rich Low_complexity Low_complexity 1 29 0 2406 251 68 22 chr2 80310026 80310881 -172945702 + L1M3c LINE L1 3252 4145 -2237 355 331 6 19 chr2 80311624 80311781 -172944802 + GA-rich Low_complexity Low_complexity 1 155 0 229 385 37 0 chr2 80313280 80313389 -172943194 + L2 LINE L2 3143 3255 -17 230 95 0 0 chr2 80313760 80313802 -172942781 - LTR66 LTR ERVL -171 439 398 204 97 0 0 chr2 80313879 80313910 -172942673 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 257 130 0 22 chr2 80314948 80314994 -172941589 + MADE1 DNA Mariner 36 80 0 209 269 0 0 chr2 80315081 80315133 -172941450 + (ATG)n Simple_repeat Simple_repeat 2 53 0 376 323 23 0 chr2 80315386 80315516 -172941067 - MIR3 SINE MIR -11 197 65 537 273 62 28 chr2 80316598 80316774 -172939809 + MER5A DNA MER1_type 6 187 -2 2020 124 3 16 chr2 80317827 80318134 -172938449 - AluSg SINE Alu -7 303 1 23 0 0 0 chr2 80318699 80318722 -172937861 + AT_rich Low_complexity Low_complexity 1 23 0 918 125 0 0 chr2 80319546 80319690 -172936893 + (TA)n Simple_repeat Simple_repeat 2 145 0 212 54 54 0 chr2 80320476 80320513 -172936070 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 257 0 30 0 chr2 80320818 80320851 -172935732 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 292 270 69 53 chr2 80321917 80322081 -172934502 + L2 LINE L2 2035 2204 -1110 1673 162 56 0 chr2 80322081 80322402 -172934181 + L1MA5 LINE L1 5961 6299 -1 292 270 69 53 chr2 80322402 80322426 -172934157 + L2 LINE L2 2204 2226 -1088 217 222 0 0 chr2 80322426 80322471 -172934112 + (TG)n Simple_repeat Simple_repeat 2 46 0 279 0 0 0 chr2 80325111 80325142 -172931441 + (TAGA)n Simple_repeat Simple_repeat 3 33 0 22 70 0 0 chr2 80325823 80325866 -172930717 + AT_rich Low_complexity Low_complexity 1 43 0 184 293 116 41 chr2 80326565 80326712 -172929871 - L2 LINE L2 -1 3312 3155 1557 181 17 3 chr2 80326911 80327204 -172929379 - AluJo SINE Alu -15 297 1 23 33 0 0 chr2 80327871 80327901 -172928682 + AT_rich Low_complexity Low_complexity 1 30 0 2149 144 25 0 chr2 80328714 80329068 -172927515 + THE1B LTR MaLR 2 364 0 28 0 0 0 chr2 80329663 80329691 -172926892 + AT_rich Low_complexity Low_complexity 1 28 0 357 332 63 16 chr2 80329980 80330234 -172926349 + MLT1J LTR MaLR 235 609 -6 902 307 10 29 chr2 80331995 80332301 -172924282 + MLT1K LTR MaLR 289 588 0 22 35 0 0 chr2 80332576 80332605 -172923978 + AT_rich Low_complexity Low_complexity 1 29 0 23 33 0 0 chr2 80332730 80332760 -172923823 + AT_rich Low_complexity Low_complexity 1 30 0 256 333 0 0 chr2 80332831 80332927 -172923656 + Charlie7 DNA MER1_type 1 96 -2516 261 264 69 11 chr2 80333258 80333345 -172923238 - MLT1I LTR MaLR -315 94 3 203 302 182 13 chr2 80334952 80335111 -172921472 + MIR SINE MIR 3 188 -74 357 304 9 9 chr2 80335435 80335550 -172921033 + LTR40c LTR ERVL 5 119 -346 11923 221 19 6 chr2 80335651 80339689 -172916894 + L1PA16 LINE L1 2771 6860 -9 38 51 0 0 chr2 80339689 80339748 -172916835 + AT_rich Low_complexity Low_complexity 1 59 0 1075 240 18 29 chr2 80339758 80340037 -172916546 + LTR40b LTR ERVL 187 462 0 606 249 59 27 chr2 80343099 80343320 -172913263 + Charlie3 DNA MER1_type 1 228 -2482 2635 130 21 9 chr2 80343445 80343868 -172912715 + MER1A DNA MER1_type 102 529 0 278 326 10 20 chr2 80344195 80344293 -172912290 + MER5A DNA MER1_type 93 189 0 207 119 0 48 chr2 80344711 80344753 -172911830 + (TTG)n Simple_repeat Simple_repeat 1 40 0 382 346 44 6 chr2 80348108 80348290 -172908293 + L2 LINE L2 2554 2742 -572 330 288 88 86 chr2 80348267 80348722 -172907861 + L2 LINE L2 2846 3301 -12 * 643 250 47 90 chr2 80348946 80348992 -172907591 - MIR SINE MIR 0 262 216 2211 147 19 8 chr2 80348992 80349352 -172907231 + THE1B LTR MaLR 1 364 0 9158 135 63 5 chr2 80349352 80350791 -172905792 + THE1B-int LTR MaLR 1 1532 -48 2092 135 0 0 chr2 80350791 80351094 -172905489 - AluSg SINE Alu -7 303 1 9158 135 63 5 chr2 80351094 80351147 -172905436 + THE1B-int LTR MaLR 1532 1580 0 2320 124 31 6 chr2 80351147 80351502 -172905081 + THE1B LTR MaLR 1 364 0 643 250 47 90 chr2 80351502 80351709 -172904874 - MIR SINE MIR -43 219 18 189 214 0 0 chr2 80352805 80352847 -172903736 + (TA)n Simple_repeat Simple_repeat 2 43 0 180 111 0 0 chr2 80354587 80354614 -172901969 + (A)n Simple_repeat Simple_repeat 1 27 0 3048 179 28 5 chr2 80355650 80356153 -172900430 - L1MA8 LINE L1 0 6291 5770 423 0 0 0 chr2 80356153 80356200 -172900383 + (CA)n Simple_repeat Simple_repeat 2 48 0 3048 179 28 5 chr2 80356200 80356315 -172900268 - L1MA8 LINE L1 -521 5770 5659 247 319 55 11 chr2 80356347 80356438 -172900145 + L2 LINE L2 3178 3272 0 910 214 91 11 chr2 80356756 80357031 -172899552 - MER33 DNA MER1_type -22 302 6 459 0 0 0 chr2 80357185 80357236 -172899347 + (TG)n Simple_repeat Simple_repeat 2 52 0 736 313 38 12 chr2 80357604 80357844 -172898739 - MLT2F LTR ERVL -417 246 1 216 300 107 79 chr2 80358259 80358399 -172898184 - MIR3 SINE MIR -7 201 58 259 241 17 0 chr2 80359529 80359587 -172896996 + MIR SINE MIR 92 150 -112 28 0 0 0 chr2 80359980 80360008 -172896575 + AT_rich Low_complexity Low_complexity 1 28 0 21 26 0 26 chr2 80360161 80360187 -172896396 + AT_rich Low_complexity Low_complexity 1 27 -11 2180 116 0 0 chr2 80360187 80360481 -172896102 + AluSx SINE Alu 1 294 -18 21 26 0 26 chr2 80360481 80360493 -172896090 + AT_rich Low_complexity Low_complexity 27 38 0 926 237 74 64 chr2 80360575 80360967 -172895616 + MLT2C1 LTR ERVL 2 397 0 2033 105 40 0 chr2 80360982 80361280 -172895303 - AluSg SINE Alu 0 310 2 1551 122 140 11 chr2 80361493 80361764 -172894819 + AluSg SINE Alu 1 306 -4 2093 106 3 3 chr2 80361765 80362058 -172894525 + AluSc SINE Alu 3 295 -14 25 0 0 0 chr2 80363624 80363649 -172892934 + AT_rich Low_complexity Low_complexity 1 25 0 207 0 0 0 chr2 80364912 80364935 -172891648 + (A)n Simple_repeat Simple_repeat 1 23 0 584 265 71 40 chr2 80365020 80365273 -172891310 + MIR SINE MIR 2 262 0 281 284 11 21 chr2 80365435 80365530 -172891053 + MLT-int LTR MaLR 2 95 -1640 549 100 0 0 chr2 80365998 80366078 -172890505 - MADE1 DNA Mariner 0 80 1 338 38 0 38 chr2 80366753 80366806 -172889777 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 1633 158 8 29 chr2 80367469 80367662 -172888921 - L1MA9 LINE L1 -42 6270 6075 2293 108 14 8 chr2 80367662 80368015 -172888568 - THE1A LTR MaLR 0 355 1 11097 98 23 3 chr2 80368015 80369563 -172887020 - THE1A-int LTR MaLR 0 1580 1 1972 147 20 14 chr2 80369563 80369916 -172886667 - THE1A LTR MaLR 0 355 1 1633 158 8 29 chr2 80369916 80370105 -172886478 - L1MA9 LINE L1 -234 6078 5795 502 329 128 0 chr2 80371863 80372082 -172884501 - MIR SINE MIR 0 262 16 21 57 0 0 chr2 80372245 80372280 -172884303 + AT_rich Low_complexity Low_complexity 1 35 0 2070 92 0 11 chr2 80374412 80374693 -172881890 + AluY SINE Alu 1 278 -33 180 0 0 0 chr2 80374693 80374713 -172881870 + (CA)n Simple_repeat Simple_repeat 1 20 0 298 0 48 0 chr2 80374714 80374756 -172881827 + (TA)n Simple_repeat Simple_repeat 2 45 0 1239 126 75 26 chr2 80374841 80375288 -172881295 - MLT2A2 LTR ERVL 0 453 1 2144 98 3 7 chr2 80375812 80376107 -172880476 + AluY SINE Alu 1 294 -17 238 296 34 57 chr2 80376389 80376565 -172880018 - L1ME LINE L1 -458 5663 5492 722 308 64 82 chr2 80377227 80378211 -172878372 + L2 LINE L2 2116 3313 0 26 30 0 0 chr2 80379731 80379764 -172876819 + AT_rich Low_complexity Low_complexity 1 33 0 247 312 102 13 chr2 80379845 80380002 -172876581 - L1ME3A LINE L1 -11 6159 5989 1481 264 47 27 chr2 80380133 80380687 -172875896 - L1MC5 LINE L1 -435 7526 6962 969 233 61 0 chr2 80380711 80380731 -172875852 - L1MD1 LINE L1 -12 6230 6213 1258 36 84 0 chr2 80380731 80380898 -172875685 - L1PA5 LINE L1 -7 6147 5967 969 233 61 0 chr2 80380898 80380921 -172875662 - L1MD1 LINE L1 -29 6213 6193 243 0 0 0 chr2 80380921 80380948 -172875635 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 969 233 61 0 chr2 80380948 80381182 -172875401 - L1MD1 LINE L1 -49 6193 5935 1004 196 46 5 chr2 80381253 80381472 -172875111 - L1MD1 LINE L1 -290 5952 5725 26 50 0 0 chr2 80381892 80381932 -172874651 + AT_rich Low_complexity Low_complexity 1 40 0 219 114 0 0 chr2 80383379 80383414 -172873169 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 21 0 0 0 chr2 80384737 80384758 -172871825 + AT_rich Low_complexity Low_complexity 1 21 0 36 0 0 0 chr2 80385567 80385603 -172870980 + AT_rich Low_complexity Low_complexity 1 36 0 5313 169 47 8 chr2 80386452 80387442 -172869141 - L1MA6 LINE L1 0 6300 5269 563 100 0 0 chr2 80387442 80387522 -172869061 - MADE1 DNA Mariner 0 80 1 5313 169 47 8 chr2 80387522 80387539 -172869044 - L1MA6 LINE L1 -1031 5269 5254 235 178 0 0 chr2 80387538 80387583 -172869000 + L1 LINE L1 4634 4678 -1468 * 1170 242 43 41 chr2 80387627 80388091 -172868492 + L1MC4 LINE L1 7590 7995 0 24 0 0 0 chr2 80389920 80389944 -172866639 + AT_rich Low_complexity Low_complexity 1 24 0 195 69 0 0 chr2 80390202 80390231 -172866352 + (TG)n Simple_repeat Simple_repeat 1 29 0 234 205 36 0 chr2 80390289 80390372 -172866211 + (CATA)n Simple_repeat Simple_repeat 2 87 0 309 289 10 0 chr2 80390399 80390496 -172866087 + (TA)n Simple_repeat Simple_repeat 1 98 0 253 217 72 24 chr2 80390514 80390597 -172865986 + L1MC4 LINE L1 6617 6703 -1339 273 303 28 45 chr2 80390892 80391070 -172865513 - L1MC5 LINE L1 -54 7907 7733 1952 142 64 26 chr2 80391140 80391485 -172865098 + THE1B LTR MaLR 7 364 0 442 287 78 31 chr2 80391490 80391849 -172864734 - L1MC5 LINE L1 -311 7650 7275 2299 184 35 22 chr2 80393001 80393462 -172863121 - MLT1C LTR MaLR 0 467 1 393 143 0 133 chr2 80393498 80393603 -172862980 - MER20 DNA MER1_type -1 218 128 213 196 0 0 chr2 80393862 80393908 -172862675 + (TATG)n Simple_repeat Simple_repeat 3 48 0 4917 177 38 19 chr2 80394292 80394783 -172861800 - L1MA5 LINE L1 -2 6298 5818 324 0 0 0 chr2 80394783 80394819 -172861764 + (TA)n Simple_repeat Simple_repeat 1 36 0 4917 177 38 19 chr2 80394819 80395537 -172861046 - L1MA5 LINE L1 -482 5818 5069 525 329 25 32 chr2 80395725 80396002 -172860581 + Charlie8 DNA MER1_type 1 275 -2142 458 299 75 0 chr2 80396366 80396540 -172860043 + MIR SINE MIR 74 260 -2 971 240 18 9 chr2 80396715 80396932 -172859651 + MER20 DNA MER1_type 1 219 0 27 0 0 0 chr2 80397657 80397684 -172858899 + AT_rich Low_complexity Low_complexity 1 27 0 2145 99 3 40 chr2 80397806 80398128 -172858455 - AluSq SINE Alu -3 310 1 238 284 15 0 chr2 80399746 80399813 -172856770 + MIR SINE MIR 116 183 -79 7052 23 0 0 chr2 80401035 80401855 -172854728 + L1PA3 LINE L1 5328 6147 -8 21 0 0 0 chr2 80401970 80401991 -172854592 + AT_rich Low_complexity Low_complexity 1 21 0 823 219 117 0 chr2 80402595 80402791 -172853792 + MER58A DNA MER1_type 2 220 -4 329 274 166 32 chr2 80403266 80403423 -172853160 + MER5B DNA MER1_type 1 178 0 206 125 0 25 chr2 80404132 80404172 -172852411 + (TTTC)n Simple_repeat Simple_repeat 3 41 0 457 239 88 0 chr2 80405665 80405778 -172850805 + MER58 DNA MER1_type 1 123 -263 265 317 85 49 chr2 80406308 80406532 -172850051 + MIR SINE MIR 1 232 -30 283 305 6 96 chr2 80406669 80406864 -172849719 + MIR SINE MIR 18 197 -63 186 43 0 0 chr2 80408328 80408351 -172848232 + (TCTCTG)n Simple_repeat Simple_repeat 2 24 0 2251 83 0 17 chr2 80408614 80408916 -172847667 - AluSg SINE Alu -13 297 1 22 80 0 0 chr2 80409427 80409477 -172847106 + AT_rich Low_complexity Low_complexity 1 50 0 282 287 88 52 chr2 80410713 80410849 -172845734 - MIR SINE MIR 0 262 122 188 244 44 0 chr2 80410978 80411023 -172845560 - L2 LINE L2 -82 3231 3185 186 302 111 0 chr2 80411109 80411172 -172845411 + L2 LINE L2 3203 3272 0 260 303 127 35 chr2 80411479 80411621 -172844962 + MIR SINE MIR 102 256 -6 540 272 68 47 chr2 80411790 80412025 -172844558 + MIR SINE MIR 2 241 -21 294 29 0 0 chr2 80413345 80413380 -172843203 + (CA)n Simple_repeat Simple_repeat 2 36 0 2056 216 24 64 chr2 80413959 80414389 -172842194 - L1MB7 LINE L1 -19 6663 6262 3767 83 2 4 chr2 80414389 80414897 -172841686 + MER9 LTR ERVK 1 507 -4 2056 216 24 64 chr2 80414897 80415059 -172841524 - L1MB7 LINE L1 -420 6262 6095 390 21 0 0 chr2 80415060 80415107 -172841476 + (TG)n Simple_repeat Simple_repeat 2 48 0 590 256 55 10 chr2 80415107 80415306 -172841277 - L1MB7 LINE L1 -2547 4097 3890 * 1857 269 43 58 chr2 80415303 80416061 -172840522 - L1MB7 LINE L1 -5794 748 2 2010 120 43 0 chr2 80416276 80416576 -172840007 - AluSq SINE Alu 0 313 1 30 59 0 0 chr2 80417716 80417767 -172838816 + AT_rich Low_complexity Low_complexity 1 51 0 2114 121 0 10 chr2 80418174 80418487 -172838096 + AluSx SINE Alu 1 310 -2 294 306 174 28 chr2 80418637 80418781 -172837802 + MER5A DNA MER1_type 4 168 -21 25 0 0 0 chr2 80419578 80419603 -172836980 + AT_rich Low_complexity Low_complexity 1 25 0 23 33 0 0 chr2 80420723 80420753 -172835830 + AT_rich Low_complexity Low_complexity 1 30 0 25 65 0 0 chr2 80421246 80421292 -172835291 + AT_rich Low_complexity Low_complexity 1 46 0 2766 16 0 0 chr2 80421294 80421604 -172834979 + AluYa5 SINE Alu 1 310 -1 318 26 0 0 chr2 80424030 80424069 -172832514 + (CA)n Simple_repeat Simple_repeat 2 40 0 23 33 0 0 chr2 80424177 80424207 -172832376 + AT_rich Low_complexity Low_complexity 1 30 0 1519 213 40 11 chr2 80424443 80424796 -172831787 - MLT1A1 LTR MaLR -2 363 1 285 308 0 0 chr2 80424947 80425012 -172831571 + MER58A DNA MER1_type 3 67 -40 450 278 16 8 chr2 80425137 80425263 -172831320 + MER58A DNA MER1_type 28 154 0 1023 111 111 6 chr2 80425275 80425456 -172831127 - MER30 DNA MER1_type -30 200 1 34 65 0 0 chr2 80425700 80425762 -172830821 + AT_rich Low_complexity Low_complexity 1 62 0 1842 327 50 22 chr2 80425790 80426613 -172829970 + L2 LINE L2 1762 2607 -707 254 303 108 56 chr2 80426615 80427067 -172829516 + L2 LINE L2 2777 3273 -40 405 0 0 0 chr2 80427070 80427115 -172829468 + (CA)n Simple_repeat Simple_repeat 2 46 0 23 78 0 0 chr2 80427159 80427210 -172829373 + AT_rich Low_complexity Low_complexity 1 51 0 24 0 0 0 chr2 80428245 80428269 -172828314 + AT_rich Low_complexity Low_complexity 1 24 0 22 88 0 0 chr2 80428656 80428713 -172827870 + AT_rich Low_complexity Low_complexity 1 57 0 602 176 29 47 chr2 80429611 80429781 -172826802 - AluY SINE Alu 0 311 145 1898 105 10 10 chr2 80430206 80430501 -172826082 - AluY SINE Alu -16 295 1 333 257 131 47 chr2 80430669 80430883 -172825700 + MLT1J LTR MaLR 266 497 -14 473 261 93 25 chr2 80430994 80431155 -172825428 + MIR SINE MIR 12 183 -79 22 56 0 0 chr2 80431583 80431619 -172824964 + AT_rich Low_complexity Low_complexity 1 36 0 25 31 0 0 chr2 80431868 80431900 -172824683 + AT_rich Low_complexity Low_complexity 1 32 0 606 327 64 20 chr2 80432514 80432765 -172823818 - MIR SINE MIR 0 262 1 192 77 0 0 chr2 80432806 80432832 -172823751 + (TG)n Simple_repeat Simple_repeat 2 27 0 1912 123 31 3 chr2 80432873 80433039 -172823544 - AluSq SINE Alu -12 301 122 192 77 0 0 chr2 80433039 80433065 -172823518 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 1912 123 31 3 chr2 80433065 80433191 -172823392 - AluSq SINE Alu -191 122 1 848 292 65 72 chr2 80433277 80434130 -172822453 + L1ME3A LINE L1 1 847 -5272 1976 47 0 22 chr2 80434644 80434918 -172821665 + LTR7 LTR ERV1 24 291 -159 2182 43 0 7 chr2 80435018 80435300 -172821283 + LTR7 LTR ERV1 169 448 -2 19497 92 58 44 chr2 80435302 80438548 -172818035 + HERVH LTR ERV1 1 3290 -4423 3271 121 4 6 chr2 80438538 80439041 -172817542 + HERVH LTR ERV1 3492 3993 -3720 * 4303 132 14 1 chr2 80439043 80439697 -172816886 + HERVH LTR ERV1 4488 5149 -2564 1388 130 19 0 chr2 80439698 80439914 -172816669 + HERVH LTR ERV1 5600 5819 -1894 * 2435 76 47 16 chr2 80439912 80440292 -172816291 + HERVH LTR ERV1 7322 7713 0 2776 44 6 8 chr2 80440292 80440658 -172815925 + LTR7 LTR ERV1 1 365 -85 5039 178 57 8 chr2 80440662 80442124 -172814459 + L1MA7 LINE L1 4204 5736 -555 1987 112 0 23 chr2 80442137 80442441 -172814142 - AluSx SINE Alu -15 297 1 287 96 135 0 chr2 80442442 80442494 -172814089 + L1MA7 LINE L1 5802 5860 -445 1100 200 44 4 chr2 80442520 80442790 -172813793 + L1MA7 LINE L1 6007 6287 -4 330 252 166 7 chr2 80442845 80442984 -172813599 + HAL1 LINE L1 1486 1646 -861 29 28 0 0 chr2 80443090 80443126 -172813457 + AT_rich Low_complexity Low_complexity 1 36 0 273 287 34 81 chr2 80443497 80443793 -172812790 + L1ME3A LINE L1 2114 2395 -3734 23 33 0 0 chr2 80443851 80443881 -172812702 + AT_rich Low_complexity Low_complexity 1 30 0 417 294 113 24 chr2 80444039 80444695 -172811888 + L1ME3A LINE L1 2659 3372 -2757 713 302 70 17 chr2 80444902 80445965 -172810618 + L1ME3A LINE L1 4739 5847 -306 33 0 0 0 chr2 80446475 80446508 -172810075 + AT_rich Low_complexity Low_complexity 1 33 0 493 275 104 33 chr2 80447046 80447439 -172809144 + L1MC5 LINE L1 7314 7734 -227 1916 95 42 4 chr2 80447472 80447735 -172808848 - AluSc SINE Alu -8 301 29 697 294 14 32 chr2 80449413 80449634 -172806949 + MER58A DNA MER1_type 2 218 -6 231 111 0 167 chr2 80450264 80450336 -172806247 - L1MCa LINE L1 -4362 2064 2005 1073 319 77 12 chr2 80450568 80451072 -172805511 + L2 LINE L2 2244 2780 -534 368 260 64 98 chr2 80451687 80451958 -172804625 + L1MC5 LINE L1 7459 7709 -252 2742 30 0 12 chr2 80451958 80452296 -172804287 + L1PA4 LINE L1 5817 6150 -5 368 260 64 98 chr2 80452296 80452493 -172804090 + L1MC5 LINE L1 7709 7911 -50 22 0 0 0 chr2 80452498 80452520 -172804063 + AT_rich Low_complexity Low_complexity 1 22 0 531 349 90 41 chr2 80452583 80452996 -172803587 + L2 LINE L2 2847 3279 -34 189 74 0 0 chr2 80453407 80453434 -172803149 + (TAA)n Simple_repeat Simple_repeat 2 28 0 2303 109 3 0 chr2 80454165 80454477 -172802106 + AluSp SINE Alu 1 313 0 188 167 21 0 chr2 80454918 80454966 -172801617 + GA-rich Low_complexity Low_complexity 1 49 0 31 88 0 0 chr2 80455056 80455136 -172801447 + AT_rich Low_complexity Low_complexity 1 80 0 2430 15 0 0 chr2 80455204 80455477 -172801106 - AluYa5 SINE Alu -4 307 35 582 328 142 23 chr2 80456017 80456763 -172799820 + L1MEd LINE L1 423 1257 -4862 21 36 0 0 chr2 80457320 80457348 -172799235 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 80457579 80457600 -172798983 + AT_rich Low_complexity Low_complexity 1 21 0 1649 114 7 77 chr2 80457731 80458055 -172798528 - AluSc SINE Alu 0 303 1 2466 187 68 24 chr2 80458055 80458558 -172798025 + Tigger7 DNA MER2_type 2 526 -1961 380 283 0 0 chr2 80458552 80458644 -172797939 + Tigger7 DNA MER2_type 2496 2587 0 * 13794 92 7 6 chr2 80459322 80461219 -172795364 - HERVK11 LTR ERVK -6053 1900 1 4043 128 80 27 chr2 80461219 80462232 -172794351 - MER11A LTR ERVK 0 1266 1 1038 215 91 45 chr2 80463435 80463854 -172792729 - L1MB8 LINE L1 -27 6151 5714 251 339 147 34 chr2 80465309 80465486 -172791097 + MIR SINE MIR 12 208 -54 435 227 84 8 chr2 80465492 80465611 -172790972 + MER94 DNA DNA 7 134 0 261 324 102 0 chr2 80466158 80466266 -172790317 - L2 LINE L2 -3 3310 3192 303 283 40 27 chr2 80466535 80466710 -172789873 - MLT1J2 LTR MaLR 0 428 277 445 196 20 14 chr2 80469046 80469194 -172787389 + (TA)n Simple_repeat Simple_repeat 2 150 0 279 0 0 0 chr2 80469843 80469874 -172786709 + (GA)n Simple_repeat Simple_repeat 2 32 0 389 315 56 0 chr2 80473205 80473348 -172783235 - MIR SINE MIR -82 180 30 390 309 49 15 chr2 80474840 80475044 -172781539 + L1ME LINE L1 5529 5739 -382 234 0 0 0 chr2 80475141 80475167 -172781416 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1983 130 0 3 chr2 80475169 80475454 -172781129 - AluSx SINE Alu -25 287 4 30 59 0 0 chr2 80475863 80475914 -172780669 + AT_rich Low_complexity Low_complexity 1 51 0 2010 120 43 0 chr2 80477054 80477354 -172779229 + AluSq SINE Alu 1 313 0 1791 264 50 63 chr2 80477569 80478326 -172778257 + L1MB7 LINE L1 2 748 -5794 590 256 55 10 chr2 80478323 80478522 -172778061 + L1MB7 LINE L1 3890 4097 -2547 * 390 21 0 0 chr2 80478522 80478569 -172778014 + (CA)n Simple_repeat Simple_repeat 2 48 0 2069 211 25 64 chr2 80478570 80478732 -172777851 + L1MB7 LINE L1 6095 6262 -420 3767 83 2 4 chr2 80478732 80479240 -172777343 - MER9 LTR ERVK -4 507 1 2069 211 25 64 chr2 80479240 80479669 -172776914 + L1MB7 LINE L1 6262 6663 -19 213 200 0 0 chr2 80480246 80480291 -172776292 + (TG)n Simple_repeat Simple_repeat 2 46 0 319 141 0 28 chr2 80482125 80482196 -172774387 + (TA)n Simple_repeat Simple_repeat 1 69 0 22 0 0 0 chr2 80483337 80483359 -172773224 + AT_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr2 80483562 80483598 -172772985 + AT_rich Low_complexity Low_complexity 1 36 0 590 314 47 6 chr2 80483635 80483804 -172772779 + MLT1F LTR MaLR 3 178 -364 182 37 37 0 chr2 80483812 80483839 -172772744 + (TC)n Simple_repeat Simple_repeat 2 29 0 2427 79 0 0 chr2 80484081 80484386 -172772197 + AluSg SINE Alu 1 305 -5 243 0 0 0 chr2 80484614 80484641 -172771942 + (TAGA)n Simple_repeat Simple_repeat 2 28 0 1972 118 0 24 chr2 80484867 80485154 -172771429 - AluSq SINE Alu -29 284 5 2379 73 0 0 chr2 80486729 80487029 -172769554 - AluY SINE Alu -11 300 1 2788 10 0 0 chr2 80487043 80487352 -172769231 - AluYa5 SINE Alu -2 309 1 23 0 0 0 chr2 80487358 80487381 -172769202 + AT_rich Low_complexity Low_complexity 1 23 0 270 206 96 0 chr2 80487457 80487530 -172769053 - MIR SINE MIR -72 190 111 936 212 32 125 chr2 80488026 80488083 -172768500 - MLT1A1 LTR MaLR 0 390 329 3548 139 31 3 chr2 80488083 80488688 -172767895 - L1MA4A LINE L1 -2 6301 5680 936 212 32 125 chr2 80488688 80489039 -172767544 - MLT1A1 LTR MaLR -61 329 6 254 325 0 0 chr2 80489063 80489146 -172767437 + GA-rich Low_complexity Low_complexity 5 87 0 24 32 0 0 chr2 80492080 80492111 -172764472 + AT_rich Low_complexity Low_complexity 1 31 0 712 92 0 0 chr2 80492235 80492333 -172764250 + L1PA5 LINE L1 1 98 -6048 * 31576 61 4 1 chr2 80492331 80497844 -172758739 + L1PA5 LINE L1 623 6148 -6 330 26 0 0 chr2 80498638 80498677 -172757906 + (CA)n Simple_repeat Simple_repeat 1 39 0 241 345 55 0 chr2 80499065 80499175 -172757408 - MIR SINE MIR -124 138 23 314 298 61 0 chr2 80499284 80499398 -172757185 - MIR SINE MIR -12 250 130 1255 342 19 5 chr2 80500171 80500589 -172755994 - LTR16A LTR ERVL -11 439 16 254 232 0 12 chr2 80501415 80501497 -172755086 + (TA)n Simple_repeat Simple_repeat 2 82 0 21 36 0 0 chr2 80501577 80501605 -172754978 + AT_rich Low_complexity Low_complexity 1 28 0 2280 89 0 20 chr2 80501705 80502039 -172754544 + AluY SINE Alu 1 311 0 32 26 0 0 chr2 80503216 80503255 -172753328 + AT_rich Low_complexity Low_complexity 1 39 0 904 189 70 87 chr2 80505313 80505625 -172750958 + MER33 DNA MER1_type 14 320 -4 33 0 0 0 chr2 80506983 80507016 -172749567 + AT_rich Low_complexity Low_complexity 1 33 0 1804 188 102 8 chr2 80507192 80507331 -172749252 - L1MA10 LINE L1 -1 6333 6208 378 107 0 0 chr2 80507331 80507387 -172749196 + (TG)n Simple_repeat Simple_repeat 2 57 0 1804 188 102 8 chr2 80507387 80507641 -172748942 - L1MA10 LINE L1 -126 6208 5903 1459 192 76 3 chr2 80507608 80507938 -172748645 + L1MA10 LINE L1 5584 5935 -278 * 216 0 0 0 chr2 80508004 80508028 -172748555 + (TTG)n Simple_repeat Simple_repeat 1 24 0 425 324 75 33 chr2 80508445 80508545 -172748038 + MIR SINE MIR 18 112 -150 2151 116 0 0 chr2 80508545 80508846 -172747737 - AluY SINE Alu -10 301 1 425 324 75 33 chr2 80508846 80508984 -172747599 + MIR SINE MIR 112 246 -16 969 185 17 0 chr2 80509017 80509249 -172747334 - L1MA7 LINE L1 0 6291 6056 315 290 46 74 chr2 80510659 80510983 -172745600 + L1ME LINE L1 5462 5776 -345 31 82 0 0 chr2 80511410 80511483 -172745100 + AT_rich Low_complexity Low_complexity 1 73 0 23 0 0 0 chr2 80511770 80511793 -172744790 + AT_rich Low_complexity Low_complexity 1 23 0 1294 231 6 18 chr2 80511921 80512250 -172744333 + L1MA6 LINE L1 5966 6290 -10 24 0 0 0 chr2 80512250 80512274 -172744309 + AT_rich Low_complexity Low_complexity 1 24 0 778 244 6 0 chr2 80512926 80513090 -172743493 - AluJb SINE Alu -12 300 136 22 88 0 0 chr2 80513699 80513756 -172742827 + AT_rich Low_complexity Low_complexity 1 57 0 668 239 72 42 chr2 80513946 80514210 -172742373 + L1MC5 LINE L1 7253 7524 -437 267 331 7 0 chr2 80514510 80514652 -172741931 - L1MEd LINE L1 -3603 2526 2384 7733 164 38 29 chr2 80515363 80515588 -172740995 - Tigger2 DNA MER2_type 0 2718 2497 1259 73 0 0 chr2 80515588 80515752 -172740831 + L1PA5 LINE L1 5991 6154 0 7733 164 38 29 chr2 80515752 80516983 -172739600 - Tigger2 DNA MER2_type -221 2497 1248 421 243 123 49 chr2 80517424 80517769 -172738814 + LTR26 LTR ERV1 310 727 0 773 137 23 15 chr2 80517795 80517926 -172738657 - Tigger2 DNA MER2_type -2586 132 1 38351 80 18 3 chr2 80518121 80524181 -172732402 + L1PA5 LINE L1 4 6154 0 354 346 50 20 chr2 80524422 80524624 -172731959 - L1MEd LINE L1 -4971 1148 941 2215 170 38 9 chr2 80524635 80525087 -172731496 - L1MA4 LINE L1 -5 6295 5831 2355 188 20 2 chr2 80525091 80525548 -172731035 + L1 LINE L1 3785 4249 -1897 1511 256 18 25 chr2 80525648 80526047 -172730536 + MSTD LTR MaLR 1 396 0 1594 288 97 21 chr2 80526259 80526829 -172729754 + MLT1E2 LTR MaLR 14 626 0 216 203 46 13 chr2 80527109 80527262 -172729321 + (TA)n Simple_repeat Simple_repeat 2 159 0 2091 117 0 7 chr2 80527465 80527794 -172728789 - AluSx SINE Alu 0 312 1 36 0 0 0 chr2 80527864 80527900 -172728683 + AT_rich Low_complexity Low_complexity 1 36 0 247 231 92 0 chr2 80528053 80528118 -172728465 - LTR33A LTR ERVL -19 504 434 2168 114 10 0 chr2 80528532 80528838 -172727745 + AluSg SINE Alu 1 309 -1 373 196 59 20 chr2 80529025 80529127 -172727456 - MLT1I LTR MaLR 0 409 304 254 304 148 59 chr2 80529576 80529879 -172726704 - L3 LINE CR1 -1 1576 1247 516 149 0 65 chr2 80529879 80529986 -172726597 - FRAM SINE Alu -73 103 4 1876 46 4 0 chr2 80530862 80531102 -172725481 - L1PA4 LINE L1 0 6155 5915 2012 118 13 32 chr2 80531276 80531447 -172725136 - AluSx SINE Alu 0 312 148 4065 98 41 2 chr2 80531447 80532029 -172724554 + LTR14B LTR ERVK 4 608 0 2012 118 13 32 chr2 80532029 80532172 -172724411 - AluSx SINE Alu -164 148 4 22 0 0 0 chr2 80532183 80532205 -172724378 + AT_rich Low_complexity Low_complexity 1 22 0 423 319 9 0 chr2 80532553 80532666 -172723917 + MER81 DNA DNA 1 114 0 2170 172 50 39 chr2 80533027 80533498 -172723085 + MER41B LTR ERV1 148 466 -12 307 204 0 0 chr2 80534262 80534316 -172722267 + MIR SINE MIR 209 262 0 2298 84 0 0 chr2 80534523 80534835 -172721748 + AluSg SINE Alu 2 313 0 369 309 49 15 chr2 80534932 80535136 -172721447 - L1ME LINE L1 -382 5739 5529 384 286 63 0 chr2 80536645 80536771 -172719812 + MIR SINE MIR 47 180 -82 5524 88 1 5 chr2 80538028 80538777 -172717806 + L1PA8A LINE L1 5383 6128 -3 1974 17 60 0 chr2 80538783 80539016 -172717567 - L1P LINE L1 -1875 4271 4025 7150 42 6 2 chr2 80539016 80540307 -172716276 + L1PA4 LINE L1 4857 6150 -5 22 0 0 0 chr2 80540498 80540520 -172716063 + AT_rich Low_complexity Low_complexity 1 22 0 492 355 74 0 chr2 80541994 80542211 -172714372 + MIR SINE MIR 18 250 -12 180 303 79 0 chr2 80542213 80542289 -172714294 - MIR SINE MIR -123 139 58 22 0 0 0 chr2 80542777 80542799 -172713784 + AT_rich Low_complexity Low_complexity 1 22 0 773 265 64 4 chr2 80543361 80543595 -172712988 + LTR16A1 LTR ERVL 169 416 -41 1806 28 0 0 chr2 80543636 80543851 -172712732 + L1PA4 LINE L1 5938 6152 -3 23 68 0 0 chr2 80544056 80544100 -172712483 + AT_rich Low_complexity Low_complexity 1 44 0 225 311 167 51 chr2 80544327 80544584 -172711999 + L2 LINE L2 1474 1760 -1554 306 396 68 5 chr2 80545015 80545207 -172711376 + L2 LINE L2 2430 2633 -681 1470 224 29 11 chr2 80545596 80545944 -172710639 + MLT1A1 LTR MaLR 1 354 -11 265 254 7 7 chr2 80545957 80546099 -172710484 + (TA)n Simple_repeat Simple_repeat 1 142 0 2269 97 3 16 chr2 80546508 80546816 -172709767 - AluSq SINE Alu -9 304 1 24 85 0 0 chr2 80547615 80547674 -172708909 + AT_rich Low_complexity Low_complexity 1 59 0 29 47 0 0 chr2 80547767 80547810 -172708773 + AT_rich Low_complexity Low_complexity 1 43 0 305 174 72 0 chr2 80547977 80548046 -172708537 - L1PA11 LINE L1 -1 6173 6100 961 271 74 18 chr2 80548107 80548553 -172708030 - Zaphod DNA AcHobo -1 4030 3560 24 53 0 0 chr2 80548740 80548778 -172707805 + AT_rich Low_complexity Low_complexity 1 38 0 1064 233 199 0 chr2 80548820 80549167 -172707416 - Zaphod DNA AcHobo -1155 2876 2461 1425 176 11 97 chr2 80549181 80549561 -172707022 + MER7A DNA MER2_type 2 346 0 501 221 177 40 chr2 80549566 80549744 -172706839 - Zaphod DNA AcHobo -3246 785 633 1787 96 127 0 chr2 80549744 80550004 -172706579 + AluSq SINE Alu 1 293 -20 501 221 177 40 chr2 80550004 80550124 -172706459 - Zaphod DNA AcHobo -3398 633 446 322 323 46 23 chr2 80550212 80550342 -172706241 - Zaphod DNA AcHobo -3722 309 177 456 309 39 6 chr2 80550373 80550554 -172706029 + MLT1L LTR MaLR 388 574 -41 270 239 99 0 chr2 80550554 80550625 -172705958 - LTR33A LTR ERVL 0 523 446 22 70 0 0 chr2 80551359 80551402 -172705181 + AT_rich Low_complexity Low_complexity 1 43 0 32 43 0 0 chr2 80551487 80551533 -172705050 + AT_rich Low_complexity Low_complexity 1 46 0 674 165 55 18 chr2 80552401 80552565 -172704018 - L1MA5A LINE L1 -4 6293 6124 1526 181 10 40 chr2 80552680 80552984 -172703599 + AluSx SINE Alu 13 307 -5 423 325 71 21 chr2 80554236 80554519 -172702064 - MLT1I LTR MaLR -2 407 111 507 298 159 5 chr2 80555444 80555652 -172700931 - MIR SINE MIR -21 241 2 180 0 0 0 chr2 80555715 80555735 -172700848 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 270 264 202 0 chr2 80556225 80556354 -172700229 + MER103 DNA DNA 11 165 -1 230 282 12 12 chr2 80556590 80556675 -172699908 + (TA)n Simple_repeat Simple_repeat 2 86 0 356 352 59 18 chr2 80558985 80559258 -172697325 + MER102a DNA MER1_type 38 321 -9 243 188 0 0 chr2 80559309 80559357 -172697226 + (TA)n Simple_repeat Simple_repeat 2 49 0 251 291 104 22 chr2 80560412 80560546 -172696037 + MIR SINE MIR 71 215 -47 312 91 0 0 chr2 80560570 80560614 -172695969 + (ATG)n Simple_repeat Simple_repeat 1 44 0 341 358 50 76 chr2 80560744 80561046 -172695537 + L2 LINE L2 2979 3272 0 333 320 66 54 chr2 80561453 80561931 -172694652 - L2 LINE L2 -98 3215 2730 1548 181 3 23 chr2 80562059 80562358 -172694225 - AluJb SINE Alu -19 293 1 1283 220 10 26 chr2 80562395 80562699 -172693884 - AluSx SINE Alu -3 299 1 2024 128 3 0 chr2 80562709 80562997 -172693586 - AluSx SINE Alu -22 290 2 219 36 0 0 chr2 80563351 80563379 -172693204 + (TA)n Simple_repeat Simple_repeat 1 28 0 277 224 59 0 chr2 80563447 80563532 -172693051 + L1MC4 LINE L1 6614 6703 -1339 237 95 0 0 chr2 80563555 80563597 -172692986 - LTR66 LTR ERVL -175 435 394 2188 121 0 0 chr2 80564081 80564387 -172692196 - AluSq SINE Alu -1 312 7 280 270 35 43 chr2 80565457 80565572 -172691011 - MER5B DNA MER1_type -48 130 17 509 281 211 16 chr2 80567256 80567687 -172688896 - LTR33A LTR ERVL -8 515 1 28 29 0 0 chr2 80568043 80568078 -172688505 + AT_rich Low_complexity Low_complexity 1 35 0 187 29 0 59 chr2 80568570 80568604 -172687979 + (TA)n Simple_repeat Simple_repeat 2 33 0 219 36 0 0 chr2 80568672 80568689 -172687894 + (GA)n Simple_repeat Simple_repeat 1 45 0 219 36 0 0 chr2 80568689 80568717 -172687866 + (GA)n Simple_repeat Simple_repeat 2 29 0 634 245 16 91 chr2 80569518 80569771 -172686812 + MIR SINE MIR 28 261 -1 201 158 0 0 chr2 80570156 80570194 -172686389 + A-rich Low_complexity Low_complexity 1 38 0 202 253 72 84 chr2 80570460 80570543 -172686040 + MIR SINE MIR 34 115 -93 22 56 0 0 chr2 80570890 80570926 -172685657 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr2 80570984 80571007 -172685576 + AT_rich Low_complexity Low_complexity 1 23 0 918 46 0 0 chr2 80572600 80572709 -172683874 + AluSc SINE Alu 1 109 -200 275 146 0 0 chr2 80572719 80572782 -172683801 + AluSc SINE Alu 240 302 0 395 305 32 86 chr2 80572951 80573006 -172683577 + MER5B DNA MER1_type 1 57 -121 2379 57 7 3 chr2 80573006 80573302 -172683281 + AluY SINE Alu 1 297 -14 395 305 32 86 chr2 80573302 80573433 -172683150 + MER5B DNA MER1_type 57 177 -1 360 25 0 75 chr2 80573551 80573631 -172682952 + (TTAA)n Simple_repeat Simple_repeat 4 77 0 261 0 0 0 chr2 80573656 80573685 -172682898 + (TA)n Simple_repeat Simple_repeat 2 30 0 243 326 93 0 chr2 80574099 80574185 -172682398 + L2 LINE L2 3215 3308 -5 1986 139 3 25 chr2 80574192 80574509 -172682074 - AluSp SINE Alu -3 310 1 378 0 0 0 chr2 80574718 80574760 -172681823 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 244 293 126 36 chr2 80575027 80575194 -172681389 - L2 LINE L2 -5 3308 3127 2033 250 56 41 chr2 80576057 80577054 -172679529 + L1MEc LINE L1 2084 3053 -3162 2016 259 81 53 chr2 80577058 80577981 -172678602 + L1MEc LINE L1 3938 4899 -1316 369 0 0 0 chr2 80577981 80578022 -172678561 + (CA)n Simple_repeat Simple_repeat 2 42 0 2016 259 81 53 chr2 80578022 80578201 -172678382 + L1MEc LINE L1 4899 5071 -1144 1848 238 62 10 chr2 80578514 80579032 -172677551 - L1MB3 LINE L1 -1066 5149 4605 1151 189 37 8 chr2 80579041 80579440 -172677143 + L1MB3 LINE L1 5158 5564 -688 3289 178 27 27 chr2 80579482 80579906 -172676677 + L1MB3 LINE L1 5546 5972 -280 2467 58 13 3 chr2 80579906 80580216 -172676367 + AluSp SINE Alu 1 313 0 3289 178 27 27 chr2 80580216 80580495 -172676088 + L1MB3 LINE L1 5971 6249 -3 5502 16 2 0 chr2 80580549 80581183 -172675400 - L1PA2 LINE L1 -4 6151 5517 1146 305 98 41 chr2 80581321 80581882 -172674701 + MLT1E LTR MaLR 1 593 0 899 227 200 0 chr2 80582040 80582168 -172674415 + AluSx SINE Alu 1 102 -210 216 0 0 0 chr2 80582168 80582192 -172674391 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 899 227 200 0 chr2 80582192 80582323 -172674260 + AluSx SINE Alu 102 312 0 796 212 76 0 chr2 80583204 80583388 -172673195 - MER3 DNA MER1_type 0 209 12 290 239 14 14 chr2 80583496 80583638 -172672945 + (TA)n Simple_repeat Simple_repeat 2 143 0 26 0 0 0 chr2 80584704 80584730 -172671853 + AT_rich Low_complexity Low_complexity 1 26 0 273 324 11 11 chr2 80584868 80585047 -172671536 + (TA)n Simple_repeat Simple_repeat 2 180 0 288 312 73 0 chr2 80585372 80585517 -172671066 - MLT1J LTR MaLR -228 222 67 360 0 0 0 chr2 80586385 80586425 -172670158 + (CA)n Simple_repeat Simple_repeat 2 41 0 236 329 63 108 chr2 80587010 80587372 -172669211 + L2 LINE L2 2926 3271 -1 544 373 36 8 chr2 80587393 80587640 -172668943 - MIR SINE MIR -1 261 8 22 35 0 0 chr2 80587671 80587700 -172668883 + AT_rich Low_complexity Low_complexity 1 29 0 202 118 29 0 chr2 80587876 80587910 -172668673 + T-rich Low_complexity Low_complexity 1 35 0 227 269 0 0 chr2 80588057 80588109 -172668474 - LTR37B LTR ERV1 -410 58 7 364 200 23 16 chr2 80588206 80588339 -172668244 - L1MD3 LINE L1 -10 7985 6099 355 180 18 90 chr2 80588360 80588471 -172668112 - L1MD2 LINE L1 -218 6936 6834 * 1068 249 44 46 chr2 80588467 80588673 -172667910 - L1MD2 LINE L1 -607 6430 6225 1767 110 0 4 chr2 80588673 80588918 -172667665 - AluSp SINE Alu 0 313 70 1068 249 44 46 chr2 80588918 80589051 -172667532 - L1MD2 LINE L1 -812 6225 6077 279 0 0 0 chr2 80589051 80589082 -172667501 + (TG)n Simple_repeat Simple_repeat 2 32 0 1068 249 44 46 chr2 80589082 80589178 -172667405 - L1MD2 LINE L1 -960 6077 5982 383 306 57 21 chr2 80589215 80589496 -172667087 - L1MD2 LINE L1 -1608 5333 5043 4557 243 78 54 chr2 80589505 80590035 -172666548 - L1MD2 LINE L1 -2008 4933 4417 2286 130 14 11 chr2 80590035 80590396 -172666187 - THE1B LTR MaLR 0 364 3 4557 243 78 54 chr2 80590396 80593559 -172663024 - L1MD2 LINE L1 -2524 4417 1003 197 280 97 11 chr2 80593605 80593698 -172662885 - L2 LINE L2 -1604 1710 1610 730 209 7 0 chr2 80593860 80593999 -172662584 + MLT1B LTR MaLR 203 342 -48 23 33 0 0 chr2 80594798 80594828 -172661755 + AT_rich Low_complexity Low_complexity 1 30 0 603 335 36 12 chr2 80595042 80595290 -172661293 + MIR SINE MIR 8 261 -1 300 272 0 22 chr2 80595527 80595619 -172660964 - L1MC4 LINE L1 -1339 6703 6614 268 303 0 0 chr2 80595541 80595630 -172660953 + L1MC4 LINE L1 6614 6702 -1340 * 309 151 0 0 chr2 80595631 80595684 -172660899 + (TA)n Simple_repeat Simple_repeat 2 54 0 2194 99 3 3 chr2 80595684 80595978 -172660605 - AluSp SINE Alu -19 294 1 4659 204 32 28 chr2 80596306 80597419 -172659164 - L1MC1 LINE L1 -2 6400 5293 183 37 37 0 chr2 80597419 80597446 -172659137 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2131 119 0 0 chr2 80597446 80597732 -172658851 - AluSq SINE Alu -27 286 1 4659 204 32 28 chr2 80597732 80598283 -172658300 - L1MC1 LINE L1 -1108 5294 4681 605 263 46 40 chr2 80598427 80598773 -172657810 - L1MC1 LINE L1 -4678 1718 1371 385 237 51 112 chr2 80598775 80598990 -172657593 - L1MD2 LINE L1 -5423 1000 799 816 280 48 31 chr2 80599115 80599408 -172657175 - L1MA9 LINE L1 -42 6270 5973 2405 218 26 25 chr2 80599756 80602631 -172653952 + L1PA16 LINE L1 3093 6159 -7 543 238 0 25 chr2 80602636 80602758 -172653825 - MER5B DNA MER1_type -50 128 10 31 82 0 0 chr2 80602804 80602877 -172653706 + AT_rich Low_complexity Low_complexity 1 73 0 1681 110 60 39 chr2 80603306 80603615 -172652968 + AluSx SINE Alu 9 323 0 26 82 0 0 chr2 80603832 80603893 -172652690 + AT_rich Low_complexity Low_complexity 1 61 0 253 260 0 90 chr2 80605640 80605740 -172650843 + L2 LINE L2 3222 3312 -1 32 0 0 0 chr2 80605843 80605875 -172650708 + AT_rich Low_complexity Low_complexity 1 32 0 409 226 71 0 chr2 80605894 80605978 -172650605 - MER58 DNA MER1_type -125 90 1 324 161 0 0 chr2 80606118 80606180 -172650403 + (TG)n Simple_repeat Simple_repeat 2 63 0 550 156 126 30 chr2 80606256 80606423 -172650160 - MER53 DNA DNA -3 186 4 233 264 216 16 chr2 80606643 80606768 -172649815 - MIR SINE MIR -9 253 104 474 340 98 53 chr2 80607280 80607656 -172648927 - L2 LINE L2 -26 3287 2895 * 1038 311 72 63 chr2 80607647 80608381 -172648202 - L2 LINE L2 -671 2643 1903 303 28 0 0 chr2 80610813 80610849 -172645734 + (TA)n Simple_repeat Simple_repeat 1 36 0 38 81 0 0 chr2 80611285 80611372 -172645211 + AT_rich Low_complexity Low_complexity 1 87 0 221 301 55 0 chr2 80611874 80611947 -172644636 + MIR SINE MIR 186 262 0 39235 40 1 1 chr2 80612005 80617609 -172638974 - L1PA4 LINE L1 -3 6152 550 1506 195 37 23 chr2 80618628 80618649 -172637934 - L1MC3 LINE L1 -63 7722 7703 3397 133 23 6 chr2 80618649 80619167 -172637416 + MER1A DNA MER1_type 1 527 0 1506 195 37 23 chr2 80619167 80619493 -172637090 - L1MC3 LINE L1 -82 7703 7370 273 322 11 11 chr2 80619573 80619663 -172636920 + MER21B LTR ERV1 1 90 -773 2634 221 55 43 chr2 80619754 80620470 -172636113 + MER21B LTR ERV1 139 862 -1 514 254 29 7 chr2 80620479 80620617 -172635966 - L1MC3 LINE L1 -486 7299 7159 769 218 73 1 chr2 80620896 80621083 -172635500 - MLT1B LTR MaLR 0 374 189 303 104 0 0 chr2 80621094 80621142 -172635441 + (GA)n Simple_repeat Simple_repeat 2 49 0 510 289 17 28 chr2 80621155 80621335 -172635248 - MLT1B LTR MaLR -193 181 4 1576 186 80 29 chr2 80622050 80622426 -172634157 + MSTD LTR MaLR 2 396 0 1100 250 0 0 chr2 80622783 80623007 -172633576 + MER58A DNA MER1_type 1 224 0 253 298 61 23 chr2 80623553 80623684 -172632899 + HAL1 LINE L1 476 611 -1896 234 286 133 0 chr2 80623929 80624034 -172632549 + HAL1 LINE L1 1130 1248 -1259 836 243 20 105 chr2 80624040 80624439 -172632144 - MLT1A1 LTR MaLR 0 365 1 233 289 16 50 chr2 80624448 80624569 -172632014 - MER94 DNA DNA -16 118 2 238 229 16 0 chr2 80624641 80624702 -172631881 + HAL1 LINE L1 1403 1464 -1043 511 345 91 42 chr2 80624747 80625429 -172631154 + L2 LINE L2 2043 2757 -557 712 215 15 51 chr2 80625616 80625811 -172630772 + MER5A DNA MER1_type 2 189 0 181 294 0 20 chr2 80626641 80626692 -172629891 - MIR SINE MIR -123 85 36 4728 169 110 20 chr2 80627448 80628384 -172628199 + LTR28 LTR ERV1 1 1020 0 216 384 13 50 chr2 80628725 80628884 -172627699 + L2 LINE L2 2898 3050 -222 1263 189 36 14 chr2 80629369 80629702 -172626881 + MSTB1 LTR MaLR 1 432 0 186 43 0 0 chr2 80630941 80630964 -172625619 + (CA)n Simple_repeat Simple_repeat 2 24 0 658 172 0 21 chr2 80633104 80633249 -172623334 + GA-rich Low_complexity Low_complexity 3 144 0 188 111 28 0 chr2 80633291 80633327 -172623256 + (TA)n Simple_repeat Simple_repeat 1 37 0 414 0 0 0 chr2 80633481 80633527 -172623056 + (TA)n Simple_repeat Simple_repeat 2 47 0 211 194 0 0 chr2 80634765 80634801 -172621782 + CT-rich Low_complexity Low_complexity 1 36 0 618 331 95 40 chr2 80635949 80636393 -172620190 - L3 LINE CR1 -142 1435 968 283 196 31 72 chr2 80636444 80636541 -172620042 - L1MC5 LINE L1 -32 7929 7837 1614 224 62 44 chr2 80636733 80637229 -172619354 + MLT1D LTR MaLR 1 505 0 387 322 73 20 chr2 80637358 80637603 -172618980 + MIR SINE MIR 5 262 0 646 355 29 23 chr2 80637653 80637960 -172618623 - L3 LINE CR1 -1059 518 210 2519 203 2 20 chr2 80638748 80639304 -172617279 - L1PA16 LINE L1 -1511 4635 4090 5470 131 12 2 chr2 80639304 80640783 -172615800 + L1PA16 LINE L1 4648 6160 -6 207 0 0 0 chr2 80642135 80642158 -172614425 + (TA)n Simple_repeat Simple_repeat 1 23 0 2094 139 0 0 chr2 80642254 80642555 -172614028 + AluSx SINE Alu 1 301 -11 34 93 0 0 chr2 80643147 80643244 -172613339 + AT_rich Low_complexity Low_complexity 1 97 0 27 0 0 0 chr2 80644177 80644204 -172612379 + AT_rich Low_complexity Low_complexity 1 27 0 1060 247 37 12 chr2 80644253 80644496 -172612087 + Tigger7 DNA MER2_type 1 249 -484 * 1551 133 4 8 chr2 80644493 80644734 -172611849 + Tigger7 DNA MER2_type 2252 2491 0 34 24 0 0 chr2 80644996 80645037 -172611546 + AT_rich Low_complexity Low_complexity 1 41 0 323 303 42 36 chr2 80645383 80645548 -172611035 + HAL1b LINE L1 329 494 -854 1886 188 25 5 chr2 80647100 80647494 -172609089 + L1MA4 LINE L1 5899 6300 0 7732 20 0 1 chr2 80648585 80649652 -172606931 + L1PA3 LINE L1 5087 6152 -3 188 33 0 33 chr2 80649655 80649685 -172606898 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 24 0 0 0 chr2 80649775 80649799 -172606784 + AT_rich Low_complexity Low_complexity 1 24 0 324 315 75 14 chr2 80650656 80650802 -172605781 + MLT1I LTR MaLR 244 398 -11 210 269 19 0 chr2 80650826 80650878 -172605705 + (TATG)n Simple_repeat Simple_repeat 3 55 0 21 0 0 0 chr2 80651960 80651981 -172604602 + AT_rich Low_complexity Low_complexity 1 21 0 1665 170 12 92 chr2 80652319 80652743 -172603840 - MLT1B LTR MaLR 0 390 1 443 350 78 38 chr2 80652779 80653151 -172603432 - L1ME LINE L1 -382 5739 5353 257 149 15 0 chr2 80653886 80653953 -172602630 + (TTG)n Simple_repeat Simple_repeat 2 69 0 2303 42 0 10 chr2 80655031 80655319 -172601264 - AluY SINE Alu -8 303 19 270 353 44 29 chr2 80655323 80655459 -172601124 + MER5B DNA MER1_type 41 178 0 270 0 0 0 chr2 80656059 80656089 -172600494 + (CA)n Simple_repeat Simple_repeat 2 31 0 261 261 23 0 chr2 80656097 80656185 -172600398 - L1MC4 LINE L1 -1339 6703 6614 226 222 14 0 chr2 80656129 80656201 -172600382 + L1MCa LINE L1 1995 2067 -4359 * 2384 80 3 0 chr2 80656648 80656950 -172599633 - AluSc SINE Alu -6 303 1 368 309 134 22 chr2 80657184 80657407 -172599176 + MIR SINE MIR 1 248 -14 23 33 0 0 chr2 80658176 80658206 -172598377 + AT_rich Low_complexity Low_complexity 1 30 0 700 79 0 0 chr2 80659988 80660089 -172596494 + AluSp/q SINE Alu 209 309 -4 187 290 43 14 chr2 80660366 80660435 -172596148 + L2 LINE L2 3237 3307 -6 4208 152 17 2 chr2 80660435 80661190 -172595393 - L1MA8 LINE L1 -312 5979 5214 532 307 45 6 chr2 80661477 80661656 -172594927 - MIR SINE MIR -1 261 76 27 0 0 0 chr2 80662093 80662120 -172594463 + AT_rich Low_complexity Low_complexity 1 27 0 28 71 0 0 chr2 80662580 80662636 -172593947 + AT_rich Low_complexity Low_complexity 1 56 0 22 35 0 0 chr2 80662652 80662681 -172593902 + AT_rich Low_complexity Low_complexity 1 29 0 288 193 64 55 chr2 80662826 80662935 -172593648 - L1ME LINE L1 -296 5825 5716 2582 26 0 3 chr2 80663699 80664001 -172592582 - AluY SINE Alu -10 301 1 573 131 41 0 chr2 80664314 80664565 -172592018 + (TA)n Simple_repeat Simple_repeat 1 261 0 22 35 0 0 chr2 80664565 80664594 -172591989 + AT_rich Low_complexity Low_complexity 1 29 0 240 158 0 0 chr2 80665198 80665255 -172591328 + T-rich Low_complexity Low_complexity 2 58 0 560 14 14 0 chr2 80666117 80666186 -172590397 + (TAGA)n Simple_repeat Simple_repeat 1 70 0 231 95 0 48 chr2 80666252 80666294 -172590289 + L1ME LINE L1 5786 5825 -296 927 254 0 0 chr2 80666308 80666509 -172590074 + MER58A DNA MER1_type 13 213 -11 210 191 0 0 chr2 80666754 80666796 -172589787 + (CATATA)n Simple_repeat Simple_repeat 4 45 0 348 265 24 24 chr2 80667360 80667526 -172589057 + (TA)n Simple_repeat Simple_repeat 2 167 0 382 304 100 48 chr2 80667862 80668092 -172588491 + MIR SINE MIR 16 257 -5 185 132 26 0 chr2 80669072 80669110 -172587473 + (CA)n Simple_repeat Simple_repeat 1 39 0 22 35 0 0 chr2 80670804 80670833 -172585750 + AT_rich Low_complexity Low_complexity 1 29 0 481 274 0 0 chr2 80671030 80671147 -172585436 + MIR SINE MIR 74 190 -72 2327 169 27 2 chr2 80671165 80671572 -172585011 + MER47B DNA MER2_type 1 417 -1 1330 181 24 107 chr2 80672037 80672417 -172584166 + MER67C LTR ERV1 30 403 -241 231 344 91 26 chr2 80672580 80672734 -172583849 + MIR SINE MIR 59 222 -40 487 275 85 72 chr2 80672926 80673005 -172583578 + L1ME4a LINE L1 5491 5568 -553 1558 201 10 3 chr2 80673005 80673293 -172583290 - AluSx SINE Alu -17 295 6 487 275 85 72 chr2 80673293 80673602 -172582981 + L1ME4a LINE L1 5568 5884 -237 2606 43 0 0 chr2 80674453 80674758 -172581825 - AluY SINE Alu -6 305 1 2140 108 0 7 chr2 80675559 80675856 -172580727 + AluSq SINE Alu 5 299 -14 36 23 0 0 chr2 80677171 80677214 -172579369 + AT_rich Low_complexity Low_complexity 1 43 0 23 54 0 0 chr2 80677317 80677354 -172579229 + AT_rich Low_complexity Low_complexity 1 37 0 255 61 0 0 chr2 80678021 80678054 -172578529 + (GAAAA)n Simple_repeat Simple_repeat 3 35 0 296 351 60 8 chr2 80678499 80678633 -172577950 - MIR SINE MIR -112 150 10 231 36 0 0 chr2 80679279 80679307 -172577276 + (TC)n Simple_repeat Simple_repeat 2 29 0 446 313 18 0 chr2 80680065 80680177 -172576406 - MIR SINE MIR -97 165 52 543 268 73 68 chr2 80680234 80680439 -172576144 + MIR SINE MIR 49 254 -8 299 335 36 36 chr2 80680652 80680819 -172575764 - L2 LINE L2 0 3313 3147 339 421 69 28 chr2 80680974 80681440 -172575143 - L2 LINE L2 -341 2973 2489 325 230 177 34 chr2 80681791 80682000 -172574583 - L2 LINE L2 -919 2395 2157 1089 256 73 40 chr2 80682436 80682831 -172573752 + MER39 LTR ERV1 300 707 0 1453 184 0 8 chr2 80682870 80683126 -172573457 - AluJo SINE Alu -36 276 23 219 203 0 0 chr2 80684259 80684318 -172572265 + GA-rich Low_complexity Low_complexity 4 62 0 237 261 0 14 chr2 80684912 80684981 -172571602 + CT-rich Low_complexity Low_complexity 2 69 0 232 209 0 0 chr2 80685743 80685786 -172570797 - L2 LINE L2 -5 3308 3266 236 273 18 97 chr2 80685858 80686023 -172570560 - L2 LINE L2 -59 3254 3103 21 57 0 0 chr2 80687093 80687128 -172569455 + AT_rich Low_complexity Low_complexity 1 35 0 1762 181 33 36 chr2 80689316 80689681 -172566902 + THE1B LTR MaLR 1 364 0 1971 118 40 0 chr2 80689681 80689985 -172566598 + THE1B-int LTR MaLR 1 316 -1264 * 5758 110 2 0 chr2 80689981 80690778 -172565805 + THE1B-int LTR MaLR 782 1580 0 1965 170 5 40 chr2 80690778 80691155 -172565428 + THE1B LTR MaLR 1 364 0 246 317 176 14 chr2 80691288 80691430 -172565153 + MIR SINE MIR 98 262 0 872 270 65 54 chr2 80691672 80692239 -172564344 + L2 LINE L2 2737 3313 0 822 277 56 9 chr2 80692288 80692501 -172564082 - MER58A DNA MER1_type -1 223 1 1181 107 0 12 chr2 80692539 80692790 -172563793 + (GGAA)n Simple_repeat Simple_repeat 1 249 0 6706 194 16 17 chr2 80692869 80693859 -172562724 + L1PA16 LINE L1 3688 4678 -1488 2140 158 11 8 chr2 80693859 80694233 -172562350 + THE1C LTR MaLR 1 375 0 6706 194 16 17 chr2 80694233 80695702 -172560881 + L1PA16 LINE L1 4678 6145 -21 296 299 15 0 chr2 80695907 80695974 -172560609 + L2 LINE L2 3246 3313 0 24 0 0 0 chr2 80696628 80696652 -172559931 + AT_rich Low_complexity Low_complexity 1 24 0 435 331 0 0 chr2 80696796 80696932 -172559651 + MIR SINE MIR 123 258 -4 182 289 36 133 chr2 80697668 80697917 -172558666 + L2 LINE L2 2836 3060 -212 180 111 0 0 chr2 80698075 80698102 -172558481 + L2 LINE L2 3245 3271 -1 290 239 0 15 chr2 80698476 80698543 -172558040 + MER103 DNA DNA 35 100 -66 862 210 27 32 chr2 80698693 80698912 -172557671 + MER20 DNA MER1_type 1 218 -1 247 339 79 31 chr2 80698916 80699143 -172557440 + MIR SINE MIR 12 249 -13 408 260 16 8 chr2 80699525 80699648 -172556935 + MLT1K LTR MaLR 455 578 -10 321 361 63 19 chr2 80700245 80700450 -172556133 - L2 LINE L2 -224 3089 2876 1173 261 127 34 chr2 80700570 80701224 -172555359 + L1ME1 LINE L1 1001 1715 -4825 253 215 0 58 chr2 80701411 80701532 -172555051 + (TAAA)n Simple_repeat Simple_repeat 1 114 0 240 232 98 31 chr2 80701534 80701728 -172554855 + L1ME1 LINE L1 2385 2591 -3949 844 228 35 90 chr2 80701738 80702263 -172554320 + L1ME1 LINE L1 5522 6010 -550 263 182 0 0 chr2 80702263 80702318 -172554265 - LTR66 LTR ERVL -162 448 394 844 228 35 90 chr2 80702318 80702737 -172553846 + L1ME1 LINE L1 6010 6451 -109 612 337 164 14 chr2 80703389 80703828 -172552755 + LTR33 LTR ERVL 9 513 -8 703 188 222 8 chr2 80704001 80704235 -172552348 - MER5C DNA MER1_type -1 323 40 226 196 0 39 chr2 80704375 80704426 -172552157 + L2 LINE L2 3256 3304 -9 225 0 0 0 chr2 80704477 80704502 -172552081 + (CA)n Simple_repeat Simple_repeat 2 26 0 26 74 0 0 chr2 80704764 80704818 -172551765 + AT_rich Low_complexity Low_complexity 1 54 0 36 40 0 0 chr2 80704897 80704947 -172551636 + AT_rich Low_complexity Low_complexity 1 50 0 25 83 0 0 chr2 80705196 80705256 -172551327 + AT_rich Low_complexity Low_complexity 1 60 0 377 286 173 22 chr2 80705256 80705574 -172551009 + L1MC/D LINE L1 3795 4160 -1986 457 316 62 85 chr2 80705630 80706383 -172550200 + L1MC/D LINE L1 4256 4991 -1155 2850 6 0 12 chr2 80706493 80706815 -172549768 + AluYb8 SINE Alu 1 318 0 23 68 0 0 chr2 80706854 80706898 -172549685 + AT_rich Low_complexity Low_complexity 1 44 0 353 303 31 57 chr2 80707126 80707354 -172549229 + L1MC/D LINE L1 5258 5479 -691 1732 174 3 0 chr2 80707371 80707676 -172548907 - L1PA13 LINE L1 -5 6158 5853 338 277 0 84 chr2 80707827 80707978 -172548605 + L1MC/D LINE L1 5678 5816 -317 234 0 0 0 chr2 80708067 80708093 -172548490 + (TA)n Simple_repeat Simple_repeat 1 26 0 627 143 41 0 chr2 80709730 80709828 -172546755 + MER66A LTR ERV1 246 347 -131 290 311 8 0 chr2 80709887 80710009 -172546574 - L1ME LINE L1 -322 5799 5677 198 0 0 0 chr2 80710138 80710160 -172546423 + (TTA)n Simple_repeat Simple_repeat 3 24 0 233 67 0 0 chr2 80710160 80710190 -172546393 - L1PA4 LINE L1 -18 6137 6108 2387 177 28 20 chr2 80710255 80710712 -172545871 - MER66A LTR ERV1 0 478 18 379 280 19 9 chr2 80710787 80710894 -172545689 - MER5A DNA MER1_type -1 188 81 572 308 54 8 chr2 80710967 80711227 -172545356 - LTR16A1 LTR ERVL -13 444 173 1712 191 0 3 chr2 80712265 80712563 -172544020 + AluJb SINE Alu 3 299 -13 187 342 88 61 chr2 80712571 80712799 -172543784 - L2 LINE L2 -509 2805 2572 1499 183 113 42 chr2 80714586 80715012 -172541571 - MSTB2 LTR MaLR 0 457 2 284 302 35 0 chr2 80715152 80715238 -172541345 - L1ME LINE L1 -2265 5543 5455 241 283 170 66 chr2 80716082 80716294 -172540289 + MIR SINE MIR 2 235 -27 21 57 0 0 chr2 80716455 80716490 -172540093 + AT_rich Low_complexity Low_complexity 1 35 0 2136 91 0 3 chr2 80716628 80716915 -172539668 + AluY SINE Alu 1 286 -25 654 49 0 0 chr2 80716915 80716997 -172539586 + (CGATA)n Simple_repeat Simple_repeat 3 84 0 435 19 0 0 chr2 80716997 80717049 -172539534 + (CATA)n Simple_repeat Simple_repeat 1 52 0 199 367 112 37 chr2 80717424 80718050 -172538533 + L2 LINE L2 1123 1795 -1519 185 271 0 21 chr2 80718259 80718307 -172538276 - MIR3 SINE MIR -52 156 110 1381 146 4 22 chr2 80718314 80718639 -172537944 + AluSx SINE Alu 61 381 0 227 267 0 17 chr2 80718664 80718724 -172537859 - MIR SINE MIR -187 75 17 23 0 0 0 chr2 80719374 80719397 -172537186 + AT_rich Low_complexity Low_complexity 1 23 0 546 270 41 41 chr2 80719407 80719603 -172536980 - MIR SINE MIR -61 201 6 51 65 0 0 chr2 80722335 80722428 -172534155 + AT_rich Low_complexity Low_complexity 1 93 0 563 316 161 43 chr2 80722550 80723318 -172533265 + L2 LINE L2 1759 2617 -697 225 252 143 25 chr2 80723701 80723820 -172532763 + L2 LINE L2 3121 3253 -60 488 198 104 0 chr2 80724320 80724426 -172532157 - MER3 DNA MER1_type 0 209 93 320 194 54 32 chr2 80724921 80725014 -172531569 - MIR SINE MIR -65 197 103 2156 216 5 2 chr2 80725217 80725661 -172530922 - L1M2 LINE L1 -578 5734 5290 339 226 28 9 chr2 80725673 80725779 -172530804 - L1P LINE L1 -924 5222 5115 746 296 32 22 chr2 80725810 80726071 -172530512 + L1MA9 LINE L1 5961 6227 -85 1870 122 42 62 chr2 80726071 80726425 -172530158 - MER7A DNA MER2_type 0 346 2 746 296 32 22 chr2 80726425 80726474 -172530109 + L1MA9 LINE L1 6227 6274 -38 22 35 0 0 chr2 80726477 80726506 -172530077 + AT_rich Low_complexity Low_complexity 1 29 0 1564 253 36 18 chr2 80728290 80728732 -172527851 - LTR40a LTR ERVL 0 519 70 275 120 0 20 chr2 80729541 80729591 -172526992 + (TA)n Simple_repeat Simple_repeat 2 50 0 608 244 31 16 chr2 80729958 80730151 -172526432 - L1MD3 LINE L1 -12 7983 7788 2887 171 22 23 chr2 80731720 80732323 -172524260 - L1MA10 LINE L1 -14 6320 5719 828 132 105 7 chr2 80732328 80732480 -172524103 - L1MB1 LINE L1 -118 6050 5884 1927 216 48 193 chr2 80732668 80733452 -172523131 - L1MC3 LINE L1 -16 7769 7119 391 271 21 0 chr2 80733452 80733548 -172523035 - MLT1F1 LTR MaLR -431 136 39 1927 216 48 193 chr2 80733548 80733909 -172522674 - L1MC3 LINE L1 -666 7119 6708 27 49 0 0 chr2 80733921 80733962 -172522621 + AT_rich Low_complexity Low_complexity 1 41 0 392 377 83 13 chr2 80734088 80734486 -172522097 - L1MEc LINE L1 -1944 4271 3846 470 299 139 42 chr2 80734571 80735069 -172521514 - L1MEc LINE L1 -2655 3560 3015 252 341 0 16 chr2 80735312 80735435 -172521148 + MIR SINE MIR 23 143 -119 319 294 166 18 chr2 80735539 80735702 -172520881 - L1MEc LINE L1 -3704 2511 2325 398 355 66 22 chr2 80736232 80736595 -172519988 - L1MEc LINE L1 -4614 1782 1404 390 334 18 54 chr2 80736876 80737100 -172519483 + L1MC/D LINE L1 5480 5695 -464 2169 117 3 0 chr2 80737151 80737451 -172519132 + AluSx SINE Alu 1 301 -11 21 0 0 0 chr2 80737857 80737878 -172518705 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 80738199 80738223 -172518360 + AT_rich Low_complexity Low_complexity 1 24 0 190 383 58 19 chr2 80739027 80739181 -172517402 - MER5A DNA MER1_type -29 160 1 585 297 85 14 chr2 80740215 80740427 -172516156 - MIR SINE MIR -4 258 32 326 257 43 2 chr2 80740470 80740572 -172516011 + MER5A DNA MER1_type 66 188 -1 29 0 0 0 chr2 80742334 80742363 -172514220 + AT_rich Low_complexity Low_complexity 1 29 0 2096 108 3 32 chr2 80742377 80742692 -172513891 - AluSx SINE Alu -6 306 1 22 70 0 0 chr2 80742726 80742769 -172513814 + AT_rich Low_complexity Low_complexity 1 43 0 2264 57 60 0 chr2 80743024 80743325 -172513258 - L1PA8 LINE L1 -269 5885 5567 1964 64 15 0 chr2 80743325 80743589 -172512994 + L1PA8 LINE L1 5892 6162 -10 210 324 111 53 chr2 80743644 80743851 -172512732 + MIR SINE MIR 43 261 -1 952 258 151 21 chr2 80744022 80744359 -172512224 + LTR40a LTR ERVL 139 519 0 218 247 22 11 chr2 80745414 80745503 -172511080 + (TA)n Simple_repeat Simple_repeat 2 91 0 266 228 0 18 chr2 80746408 80746465 -172510118 + CT-rich Low_complexity Low_complexity 3 58 0 243 274 32 0 chr2 80746466 80746528 -172510055 - L2 LINE L2 -18 3254 3191 3233 262 66 29 chr2 80746575 80747879 -172508704 + Zaphod DNA AcHobo 1 1352 -2679 386 194 8 127 chr2 80748169 80748303 -172508280 + L1MA8 LINE L1 5635 5752 -539 3625 129 59 22 chr2 80748306 80749100 -172507483 + MER4D LTR ERV1 15 610 0 2662 156 20 35 chr2 80749100 80749651 -172506932 + L1MA8 LINE L1 5749 6291 0 465 357 39 19 chr2 80750145 80750403 -172506180 - L2 LINE L2 -480 2834 2572 477 167 185 25 chr2 80750496 80750658 -172505925 + MER53 DNA DNA 1 188 -1 22 0 0 0 chr2 80750838 80750860 -172505723 + AT_rich Low_complexity Low_complexity 1 22 0 4954 160 25 9 chr2 80751062 80751969 -172504614 - MER49 LTR ERV1 0 923 2 217 318 47 71 chr2 80751969 80752139 -172504444 - MIR SINE MIR -56 206 41 21 0 0 0 chr2 80752622 80752643 -172503940 + AT_rich Low_complexity Low_complexity 1 21 0 276 274 84 32 chr2 80753039 80753134 -172503449 + L2 LINE L2 3171 3270 -2 779 291 77 16 chr2 80754918 80755231 -172501352 - MER46C DNA MER2_type 0 338 7 21 36 0 0 chr2 80755257 80755285 -172501298 + AT_rich Low_complexity Low_complexity 1 28 0 484 113 0 62 chr2 80755299 80755379 -172501204 + LTR32 LTR ERVL 14 88 -383 * 2426 152 65 14 chr2 80755360 80755794 -172500789 + LTR32 LTR ERVL 16 471 0 42 0 0 0 chr2 80755801 80755843 -172500740 + AT_rich Low_complexity Low_complexity 1 42 0 767 152 61 12 chr2 80755844 80756009 -172500574 - L1MA8 LINE L1 -6 6285 6113 1085 134 45 35 chr2 80756017 80756219 -172500364 + L1MA8 LINE L1 5900 6103 -188 198 0 0 0 chr2 80756230 80756252 -172500331 + (CTAAA)n Simple_repeat Simple_repeat 4 25 0 309 300 64 36 chr2 80756268 80756408 -172500175 - MIR SINE MIR -70 192 49 577 129 129 0 chr2 80756687 80756803 -172499780 - L1MA6 LINE L1 -291 6009 5879 207 214 71 0 chr2 80756804 80756860 -172499723 + L2 LINE L2 1992 2051 -1263 589 296 150 49 chr2 80756965 80757451 -172499132 + L2 LINE L2 2426 2960 -354 1205 231 71 0 chr2 80757465 80757747 -172498836 + MER58B DNA MER1_type 33 334 -7 755 247 58 0 chr2 80757765 80757939 -172498644 + MER5A DNA MER1_type 6 189 0 589 266 141 27 chr2 80757983 80758239 -172498344 + L2 LINE L2 3029 3313 0 28 29 0 0 chr2 80758244 80758279 -172498304 + AT_rich Low_complexity Low_complexity 1 35 0 1528 211 0 11 chr2 80758797 80759081 -172497502 - AluJo SINE Alu -29 283 3 289 355 13 45 chr2 80759650 80759805 -172496778 + L2 LINE L2 2638 2787 -527 284 308 120 17 chr2 80759969 80760086 -172496497 + L2 LINE L2 3180 3308 -5 29 47 0 0 chr2 80760133 80760176 -172496407 + AT_rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr2 80760502 80760524 -172496059 + AT_rich Low_complexity Low_complexity 1 22 0 266 325 65 0 chr2 80762533 80762610 -172493973 + L2 LINE L2 3122 3203 -69 1396 166 93 12 chr2 80762974 80763233 -172493350 - AluJo SINE Alu -30 282 3 377 292 102 75 chr2 80765185 80765411 -172491172 + L2 LINE L2 3041 3272 0 22 35 0 0 chr2 80765688 80765717 -172490866 + AT_rich Low_complexity Low_complexity 1 29 0 781 233 62 25 chr2 80765777 80766080 -172490503 - MSTD LTR MaLR 0 396 42 219 250 0 13 chr2 80766592 80766668 -172489915 + (TA)n Simple_repeat Simple_repeat 2 76 0 310 265 48 54 chr2 80767251 80767398 -172489185 + MER5B DNA MER1_type 4 149 -29 2287 64 0 58 chr2 80767916 80768316 -172488267 - AluY SINE Alu 0 381 1 25 0 0 0 chr2 80769313 80769338 -172487245 + AT_rich Low_complexity Low_complexity 1 25 0 560 318 97 29 chr2 80769706 80770087 -172486496 - MLT1K LTR MaLR 0 588 182 272 276 35 11 chr2 80770152 80770239 -172486344 - MLT1K LTR MaLR -499 89 1 186 43 0 0 chr2 80770245 80770268 -172486315 + (TCTCC)n Simple_repeat Simple_repeat 2 24 0 189 0 0 0 chr2 80770390 80770411 -172486172 + (CA)n Simple_repeat Simple_repeat 2 22 0 255 256 22 11 chr2 80770653 80770743 -172485840 + CT-rich Low_complexity Low_complexity 2 92 0 316 333 50 0 chr2 80770753 80770852 -172485731 - L2 LINE L2 -5 3267 3164 363 392 80 47 chr2 80772062 80772427 -172484156 + L2 LINE L2 2896 3272 0 7266 33 4 23 chr2 80773411 80774467 -172482116 + L1PA4 LINE L1 5117 6155 0 508 304 75 125 chr2 80775061 80775464 -172481119 + L2 LINE L2 2726 3154 -159 291 148 19 19 chr2 80775464 80775518 -172481065 + MLT1E LTR MaLR 1 54 -539 508 304 75 125 chr2 80775518 80775670 -172480913 + L2 LINE L2 3154 3312 -1 1907 161 23 37 chr2 80775868 80776217 -172480366 + MER2 DNA MER2_type 1 344 0 1268 309 33 38 chr2 80776495 80777016 -172479567 - MLT1E LTR MaLR -75 518 1 454 253 117 19 chr2 80777183 80777345 -172479238 - L1MC4a LINE L1 -1034 6774 6597 261 109 43 22 chr2 80777385 80777431 -172479152 - L1MC4a LINE L1 -1162 6646 6600 1165 256 81 68 chr2 80777450 80777849 -172478734 + L1MC5 LINE L1 6676 7069 -892 720 191 35 87 chr2 80777849 80777969 -172478614 + MER20 DNA MER1_type 1 105 -114 2464 48 0 0 chr2 80777969 80778261 -172478322 + AluY SINE Alu 1 292 -19 720 191 35 87 chr2 80778261 80778371 -172478212 + MER20 DNA MER1_type 105 219 0 1165 256 81 68 chr2 80778371 80778384 -172478199 + L1MC5 LINE L1 7069 7080 -881 1624 206 14 20 chr2 80778384 80778734 -172477849 + MER7A DNA MER2_type 1 346 0 1165 256 81 68 chr2 80778734 80778878 -172477705 + L1MC5 LINE L1 7080 7240 -721 489 257 87 62 chr2 80778940 80779376 -172477207 + L1MC5 LINE L1 7372 7818 -143 21 0 0 0 chr2 80779593 80779614 -172476969 + AT_rich Low_complexity Low_complexity 1 21 0 339 338 14 22 chr2 80779670 80779809 -172476774 - L1M4 LINE L1 -362 5816 5679 32 43 0 0 chr2 80780527 80780573 -172476010 + AT_rich Low_complexity Low_complexity 1 46 0 734 341 104 29 chr2 80781772 80782378 -172474205 + L2 LINE L2 1773 2475 -839 1852 138 13 13 chr2 80782378 80782676 -172473907 + AluSx SINE Alu 1 298 -14 734 341 104 29 chr2 80782676 80782998 -172473585 + L2 LINE L2 2475 2771 -543 1137 147 5 30 chr2 80783030 80783227 -172473356 + THE1C LTR MaLR 1 192 -183 186 103 0 0 chr2 80783276 80783305 -172473278 + (TC)n Simple_repeat Simple_repeat 1 29 0 336 48 0 0 chr2 80783350 80783392 -172473191 + (CA)n Simple_repeat Simple_repeat 1 42 0 210 71 0 0 chr2 80783392 80783420 -172473163 + (GA)n Simple_repeat Simple_repeat 1 28 0 208 339 74 16 chr2 80783477 80783526 -172473057 + L2 LINE L2 3136 3181 -91 2130 125 0 0 chr2 80783526 80783821 -172472762 - AluSc SINE Alu -14 295 1 208 339 74 16 chr2 80783821 80783892 -172472691 + L2 LINE L2 3181 3263 -9 2449 130 5 11 chr2 80784443 80784820 -172471763 + THE1C LTR MaLR 1 375 0 183 366 0 14 chr2 80785398 80785469 -172471114 + L2 LINE L2 3234 3303 -10 3360 158 21 24 chr2 80785878 80786331 -172470252 + L1MA8 LINE L1 5625 6077 -214 1887 149 3 10 chr2 80786331 80786626 -172469957 + AluSx SINE Alu 2 294 -18 3360 158 21 24 chr2 80786626 80786837 -172469746 + L1MA8 LINE L1 6077 6287 -4 922 200 14 47 chr2 80786904 80786948 -172469635 - MLT1A1 LTR MaLR -2 363 319 2265 170 102 55 chr2 80786948 80786985 -172469598 + MLT2B3 LTR ERVL 1 35 -519 2301 98 3 0 chr2 80786985 80787292 -172469291 + AluSp SINE Alu 1 308 -5 2265 170 102 55 chr2 80787292 80787783 -172468800 + MLT2B3 LTR ERVL 35 554 0 922 200 14 47 chr2 80787783 80788027 -172468556 - MLT1A1 LTR MaLR -46 319 3 1793 166 99 3 chr2 80788283 80788596 -172467987 + MER7A DNA MER2_type 1 341 -5 23 0 0 0 chr2 80788993 80789016 -172467567 + AT_rich Low_complexity Low_complexity 1 23 0 27 29 0 0 chr2 80789828 80789862 -172466721 + AT_rich Low_complexity Low_complexity 1 34 0 1725 113 79 0 chr2 80790433 80790727 -172465856 + AluY SINE Alu 1 311 0 757 283 11 0 chr2 80791127 80791314 -172465269 - MER20 DNA MER1_type 0 219 31 333 363 201 18 chr2 80791697 80793197 -172463386 + L2 LINE L2 277 2051 -1263 180 0 0 0 chr2 80793284 80793304 -172463279 + (TTATA)n Simple_repeat Simple_repeat 2 21 0 232 156 0 0 chr2 80793328 80793373 -172463210 + LTR66 LTR ERVL 394 438 -172 329 156 14 43 chr2 80793677 80793818 -172462765 + C-rich Low_complexity Low_complexity 1 137 0 324 237 104 28 chr2 80793979 80794255 -172462328 - L1MCc LINE L1 -4946 1477 1368 28 29 0 0 chr2 80794757 80794792 -172461791 + AT_rich Low_complexity Low_complexity 1 35 0 3079 133 20 90 chr2 80795011 80795665 -172460918 + LTR8 LTR ERV1 1 608 -83 303 278 145 31 chr2 80795794 80796049 -172460534 - L1M2 LINE L1 -4935 1914 1631 23 33 0 0 chr2 80796181 80796211 -172460372 + AT_rich Low_complexity Low_complexity 1 30 0 207 88 0 0 chr2 80796250 80796284 -172460299 + (TG)n Simple_repeat Simple_repeat 1 34 0 1309 219 21 7 chr2 80796568 80796633 -172459950 + AluJb SINE Alu 1 64 -248 1785 163 61 25 chr2 80796633 80796995 -172459588 - THE1C LTR MaLR 0 375 1 1309 219 21 7 chr2 80796995 80797216 -172459367 + AluJb SINE Alu 64 291 -21 1042 162 50 0 chr2 80798022 80798220 -172458363 + L1PA16 LINE L1 5959 6166 0 454 214 0 36 chr2 80798430 80798542 -172458041 - AluSg/x SINE Alu -12 300 193 25 51 0 0 chr2 80801015 80801054 -172455529 + AT_rich Low_complexity Low_complexity 1 39 0 274 297 66 11 chr2 80801132 80801223 -172455360 - L2 LINE L2 0 3313 3218 784 335 97 65 chr2 80801496 80802657 -172453926 - L2 LINE L2 -410 2904 1706 827 256 52 9 chr2 80802730 80802941 -172453642 + MER58A DNA MER1_type 5 224 0 2247 164 8 5 chr2 80803071 80803468 -172453115 - MSTA-int LTR MaLR -1253 398 1 2091 142 126 8 chr2 80803469 80803850 -172452733 - MSTA LTR MaLR -2 426 1 29 47 0 0 chr2 80804892 80804935 -172451648 + AT_rich Low_complexity Low_complexity 1 43 0 27 73 0 0 chr2 80805390 80805445 -172451138 + AT_rich Low_complexity Low_complexity 1 55 0 259 263 0 0 chr2 80806021 80806152 -172450431 + T-rich Low_complexity Low_complexity 1 131 0 1800 165 133 13 chr2 80806203 80806585 -172449998 + MSTA LTR MaLR 1 428 0 1227 189 56 24 chr2 80806742 80806991 -172449592 + AluJo SINE Alu 44 300 -12 23 33 0 0 chr2 80807034 80807064 -172449519 + AT_rich Low_complexity Low_complexity 1 30 0 26 50 0 0 chr2 80807212 80807252 -172449331 + AT_rich Low_complexity Low_complexity 1 40 0 45 34 0 0 chr2 80807293 80807352 -172449231 + AT_rich Low_complexity Low_complexity 1 59 0 375 293 54 36 chr2 80807510 80807732 -172448851 + L1M4 LINE L1 3808 4033 -2113 2101 168 11 12 chr2 80808164 80808847 -172447736 + L1P4 LINE L1 4901 5580 -586 300 102 0 0 chr2 80809668 80809717 -172446866 + (CA)n Simple_repeat Simple_repeat 2 50 0 634 250 57 42 chr2 80810542 80810754 -172445829 + MER20 DNA MER1_type 1 215 -4 609 283 80 5 chr2 80811016 80811203 -172445380 - MIR SINE MIR -3 259 59 617 335 31 13 chr2 80811618 80811845 -172444738 - MIR SINE MIR -17 245 15 321 26 0 0 chr2 80811989 80812027 -172444556 + (TG)n Simple_repeat Simple_repeat 2 39 0 26 30 0 0 chr2 80812287 80812320 -172444263 + AT_rich Low_complexity Low_complexity 1 33 0 628 303 119 68 chr2 80814508 80815037 -172441546 + LTR67 LTR ERVL 2 557 0 218 81 27 0 chr2 80815335 80815372 -172441211 + (TC)n Simple_repeat Simple_repeat 2 39 0 345 62 0 0 chr2 80815378 80815426 -172441157 + (CA)n Simple_repeat Simple_repeat 1 48 0 386 330 160 41 chr2 80816703 80817115 -172439468 - L2 LINE L2 -42 3271 2811 524 335 70 22 chr2 80817334 80817647 -172438936 - L2 LINE L2 -516 2798 2471 884 184 12 18 chr2 80817842 80818005 -172438578 + MER45A DNA AcHobo 17 178 0 2380 76 3 0 chr2 80818446 80818747 -172437836 - AluY SINE Alu -7 304 3 21 57 0 0 chr2 80819447 80819482 -172437101 + AT_rich Low_complexity Low_complexity 1 35 0 201 386 11 0 chr2 80820014 80820102 -172436481 + L2 LINE L2 3221 3309 -4 2052 136 0 0 chr2 80820177 80820471 -172436112 + AluSx SINE Alu 1 294 -18 1831 123 18 0 chr2 80820649 80820934 -172435649 - AluY SINE Alu -21 290 1 22 0 0 0 chr2 80822066 80822088 -172434495 + AT_rich Low_complexity Low_complexity 1 22 0 1748 126 52 85 chr2 80822298 80822686 -172433897 - THE1C LTR MaLR 0 375 1 2509 57 0 13 chr2 80823051 80823365 -172433218 + AluY SINE Alu 1 310 -1 967 210 11 0 chr2 80823857 80824038 -172432545 + MER5A DNA MER1_type 3 185 -4 244 316 0 32 chr2 80824712 80824807 -172431776 + MIR SINE MIR 171 262 0 1809 244 16 25 chr2 80824922 80825532 -172431051 + L1MB2 LINE L1 4839 5440 -743 5817 181 40 7 chr2 80825532 80827267 -172429316 + L1PA13 LINE L1 4153 5939 -224 1519 135 62 8 chr2 80827267 80827527 -172429056 + AluSx SINE Alu 27 300 -12 5817 181 40 7 chr2 80827527 80827747 -172428836 + L1PA13 LINE L1 5939 6150 -13 3425 188 25 14 chr2 80827761 80828495 -172428088 + L1MB2 LINE L1 5428 6169 -2 21 57 0 0 chr2 80828613 80828648 -172427935 + AT_rich Low_complexity Low_complexity 1 35 0 1273 211 53 23 chr2 80828979 80829282 -172427301 + AluJb SINE Alu 1 312 0 2147 91 11 0 chr2 80830039 80830326 -172426257 + AluY SINE Alu 9 298 -13 1718 168 85 15 chr2 80831105 80831445 -172425138 - THE1B LTR MaLR 0 364 1 11140 88 21 3 chr2 80831445 80832998 -172423585 - THE1B-int LTR MaLR 0 1580 1 1909 162 72 17 chr2 80832998 80833343 -172423240 - THE1B LTR MaLR 0 364 1 641 284 178 4 chr2 80833356 80833620 -172422963 + MLT1G LTR MaLR 244 553 -37 396 306 105 32 chr2 80834172 80834420 -172422163 - L2 LINE L2 -569 2745 2480 287 167 20 29 chr2 80834910 80835012 -172421571 + CT-rich Low_complexity Low_complexity 3 103 0 23 0 0 0 chr2 80837011 80837034 -172419549 + AT_rich Low_complexity Low_complexity 1 23 0 273 218 0 0 chr2 80838502 80838580 -172418003 + (TG)n Simple_repeat Simple_repeat 1 78 0 21 0 0 0 chr2 80838629 80838650 -172417933 + AT_rich Low_complexity Low_complexity 1 21 0 1856 163 14 0 chr2 80838762 80839056 -172417527 + AluSx SINE Alu 2 299 -13 401 338 82 50 chr2 80839805 80840394 -172416189 + L2 LINE L2 2451 3061 -252 336 291 0 43 chr2 80840409 80840526 -172416057 - L2 LINE L2 -604 2710 2599 25 31 0 0 chr2 80841609 80841641 -172414942 + AT_rich Low_complexity Low_complexity 1 32 0 279 0 0 0 chr2 80843641 80843672 -172412911 + (GA)n Simple_repeat Simple_repeat 1 31 0 376 271 59 0 chr2 80844164 80844282 -172412301 + L1M4 LINE L1 3443 3567 -2579 694 339 38 0 chr2 80844587 80844826 -172411757 + MIR SINE MIR 12 259 -3 206 292 0 0 chr2 80845593 80845641 -172410942 + (TG)n Simple_repeat Simple_repeat 1 48 0 5962 113 20 0 chr2 80845669 80846816 -172409767 - L1PA13 LINE L1 -5 6158 5004 276 242 11 55 chr2 80847258 80847349 -172409234 - MIR SINE MIR -72 190 104 708 145 34 0 chr2 80849051 80849168 -172407415 + LTR8 LTR ERV1 567 687 -4 378 0 0 0 chr2 80849171 80849213 -172407370 + (TG)n Simple_repeat Simple_repeat 1 42 0 200 300 78 11 chr2 80850368 80850458 -172406125 - L2 LINE L2 0 3313 3218 262 53 0 53 chr2 80850774 80850812 -172405771 + MER63C DNA MER1_type 2 37 -893 901 190 38 0 chr2 80850812 80850996 -172405587 + MER63C DNA MER1_type 253 443 -487 282 115 311 0 chr2 80851000 80851061 -172405522 - MADE1 DNA Mariner 0 80 1 427 199 30 92 chr2 80851067 80851165 -172405418 + MER63C DNA MER1_type 452 542 -518 2198 113 3 0 chr2 80851165 80851466 -172405117 - AluSq SINE Alu -10 303 2 427 199 30 92 chr2 80851466 80851498 -172405085 + MER63C DNA MER1_type 542 574 -356 2080 115 10 6 chr2 80851498 80851812 -172404771 + MER50 LTR ERV1 1 315 -419 23 33 0 0 chr2 80852789 80852819 -172403764 + AT_rich Low_complexity Low_complexity 1 30 0 505 283 66 48 chr2 80855869 80856077 -172400506 - MLT-int LTR MaLR -274 1406 1178 335 225 25 0 chr2 80856080 80856160 -172400423 - MLT1A1 LTR MaLR -283 82 1 308 176 108 69 chr2 80856219 80856321 -172400262 - Charlie2a DNA MER1_type -1199 1663 1558 230 336 16 0 chr2 80856391 80856519 -172400064 + (CATATA)n Simple_repeat Simple_repeat 4 133 0 263 269 86 0 chr2 80856609 80856702 -172399881 - Charlie2b DNA MER1_type -2126 656 556 * 814 256 106 24 chr2 80856701 80856955 -172399628 - Charlie2b DNA MER1_type -2470 312 38 423 336 111 19 chr2 80858381 80858589 -172397994 - MIR SINE MIR -1 261 36 930 190 18 36 chr2 80858732 80858953 -172397630 - MER20 DNA MER1_type -1 218 2 258 268 113 0 chr2 80859454 80859525 -172397058 + MER20 DNA MER1_type 140 218 -1 36 91 0 0 chr2 80860164 80860263 -172396320 + AT_rich Low_complexity Low_complexity 1 99 0 25 31 0 0 chr2 80860717 80860749 -172395834 + AT_rich Low_complexity Low_complexity 1 32 0 253 330 93 36 chr2 80863533 80863727 -172392856 + MIR SINE MIR 13 217 -45 2201 108 0 13 chr2 80864169 80864483 -172392100 - AluSx SINE Alu -2 310 1 21 0 0 0 chr2 80864637 80864658 -172391925 + AT_rich Low_complexity Low_complexity 1 21 0 3455 241 33 1 chr2 80864946 80865705 -172390878 - ERVL LTR ERVL -3549 2215 1433 28 0 0 0 chr2 80865847 80865875 -172390708 + AT_rich Low_complexity Low_complexity 1 28 0 316 304 145 43 chr2 80866288 80866640 -172389943 - L1ME4a LINE L1 -1 6120 5733 229 281 36 79 chr2 80866741 80866880 -172389703 - L1ME4a LINE L1 -533 5588 5456 232 237 17 0 chr2 80867495 80867554 -172389029 - L1ME4a LINE L1 -1537 4609 4550 369 311 19 58 chr2 80868602 80868862 -172387721 - L1ME4a LINE L1 -3097 3049 2800 21 0 0 0 chr2 80868944 80868965 -172387618 + AT_rich Low_complexity Low_complexity 1 21 0 1535 213 7 0 chr2 80869258 80869559 -172387024 + AluJo SINE Alu 1 303 -9 22 35 0 0 chr2 80869663 80869692 -172386891 + AT_rich Low_complexity Low_complexity 1 29 0 23 54 0 0 chr2 80869726 80869763 -172386820 + AT_rich Low_complexity Low_complexity 1 37 0 22 70 0 0 chr2 80869800 80869843 -172386740 + AT_rich Low_complexity Low_complexity 1 43 0 34 65 0 0 chr2 80870138 80870200 -172386383 + AT_rich Low_complexity Low_complexity 1 62 0 207 114 0 0 chr2 80870703 80870738 -172385845 + (TC)n Simple_repeat Simple_repeat 2 36 0 2129 130 0 0 chr2 80871540 80871848 -172384735 - AluSx SINE Alu -4 308 1 22 0 0 0 chr2 80872164 80872186 -172384397 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr2 80872763 80872783 -172383800 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 761 31 0 0 chr2 80872803 80872899 -172383684 - L1PA3 LINE L1 0 6155 6060 3742 190 10 28 chr2 80873242 80874001 -172382582 - MER52A LTR ERV1 0 1755 866 413 220 64 0 chr2 80874101 80874210 -172382373 - MER52A LTR ERV1 -1639 116 1 31 58 0 0 chr2 80874670 80874722 -172381861 + AT_rich Low_complexity Low_complexity 1 52 0 1493 196 0 30 chr2 80875229 80875525 -172381058 + AluJb SINE Alu 1 287 -25 29 28 0 0 chr2 80876085 80876121 -172380462 + AT_rich Low_complexity Low_complexity 1 36 0 28 48 0 0 chr2 80876529 80876571 -172380012 + AT_rich Low_complexity Low_complexity 1 42 0 2049 109 0 0 chr2 80877627 80877901 -172378682 + AluSx SINE Alu 2 275 -37 2358 94 7 0 chr2 80878233 80878541 -172378042 - AluSg SINE Alu 0 310 1 204 40 0 0 chr2 80879488 80879513 -172377070 + (A)n Simple_repeat Simple_repeat 1 25 0 804 298 33 16 chr2 80880005 80880247 -172376336 + MIR SINE MIR 17 262 0 396 0 0 0 chr2 80880515 80880559 -172376024 + (TC)n Simple_repeat Simple_repeat 1 44 0 333 0 0 0 chr2 80880559 80880596 -172375987 + (CA)n Simple_repeat Simple_repeat 1 37 0 180 341 48 56 chr2 80881623 80881749 -172374834 + L2 LINE L2 3136 3260 -12 1304 269 56 66 chr2 80882016 80882682 -172373901 - HsTC2a DNA Tc2 -4 740 82 347 309 53 69 chr2 80882741 80882929 -172373654 - MIR SINE MIR -28 234 50 * 378 313 16 8 chr2 80882926 80883054 -172373529 + MIR SINE MIR 126 254 -8 263 241 23 98 chr2 80883068 80883201 -172373382 - L2 LINE L2 -4 3309 3187 2298 57 7 3 chr2 80883980 80884276 -172372307 - AluY SINE Alu -14 297 1 543 307 85 0 chr2 80884433 80884645 -172371938 + MIR SINE MIR 4 233 -29 22 35 0 0 chr2 80885666 80885695 -172370888 + AT_rich Low_complexity Low_complexity 1 29 0 2408 66 3 0 chr2 80885703 80886082 -172370501 + AluY SINE Alu 2 381 0 310 265 48 54 chr2 80886600 80886747 -172369836 - MER5B DNA MER1_type -29 149 4 236 263 13 0 chr2 80887330 80887406 -172369177 + (CATATA)n Simple_repeat Simple_repeat 2 78 0 781 233 62 25 chr2 80887919 80888222 -172368361 + MSTD LTR MaLR 42 396 0 22 35 0 0 chr2 80888282 80888311 -172368272 + AT_rich Low_complexity Low_complexity 1 29 0 366 296 102 75 chr2 80888588 80888814 -172367769 - L2 LINE L2 0 3272 3041 23 0 0 0 chr2 80890069 80890092 -172366491 + AT_rich Low_complexity Low_complexity 1 23 0 2075 239 43 31 chr2 80890710 80891318 -172365265 - L1ME1 LINE L1 -92 6074 5460 * 5537 263 67 16 chr2 80891316 80893448 -172363135 - L1ME1 LINE L1 -923 5223 2984 244 315 0 0 chr2 80893594 80893683 -172362900 - L1MC4 LINE L1 -1342 6700 6612 274 357 71 31 chr2 80893843 80894067 -172362516 - MIR SINE MIR 0 262 30 628 253 45 45 chr2 80895057 80895255 -172361328 + MER20 DNA MER1_type 2 199 -20 23 0 0 0 chr2 80896531 80896554 -172360029 + AT_rich Low_complexity Low_complexity 1 23 0 29 47 0 0 chr2 80897101 80897144 -172359439 + AT_rich Low_complexity Low_complexity 1 43 0 231 250 52 10 chr2 80897289 80897385 -172359198 + (CATATA)n Simple_repeat Simple_repeat 1 100 0 33 43 0 0 chr2 80897597 80897644 -172358939 + AT_rich Low_complexity Low_complexity 1 47 0 23 0 0 0 chr2 80898084 80898107 -172358476 + AT_rich Low_complexity Low_complexity 1 23 0 678 122 15 8 chr2 80899267 80899398 -172357185 + GA-rich Low_complexity Low_complexity 1 132 0 2246 118 0 3 chr2 80899881 80900194 -172356389 + AluSx SINE Alu 1 312 0 889 86 29 0 chr2 80901095 80901234 -172355349 + (TTTC)n Simple_repeat Simple_repeat 3 145 0 1551 99 75 78 chr2 80901234 80901516 -172355067 - AluSp SINE Alu -32 281 1 348 24 0 0 chr2 80902071 80902112 -172354471 + (CA)n Simple_repeat Simple_repeat 2 42 0 395 343 89 35 chr2 80903154 80903510 -172353073 + L1ME LINE L1 5295 5663 -458 279 331 76 6 chr2 80906298 80906455 -172350128 + MIR SINE MIR 37 204 -58 1283 271 141 59 chr2 80906488 80906566 -172350017 - L2 LINE L2 -84 3229 3159 2550 237 26 9 chr2 80906566 80907208 -172349375 + MER82 DNA MER2_type 1 653 0 1283 271 141 59 chr2 80907208 80908146 -172348437 - L2 LINE L2 -154 3159 2130 237 162 29 44 chr2 80909300 80909368 -172347215 + L1MCa LINE L1 1980 2046 -4380 24 0 0 0 chr2 80911186 80911210 -172345373 + AT_rich Low_complexity Low_complexity 1 24 0 198 0 0 0 chr2 80911950 80911972 -172344611 + (CAA)n Simple_repeat Simple_repeat 3 24 0 2012 126 27 0 chr2 80912081 80912374 -172344209 + AluSq SINE Alu 3 303 -10 263 300 36 64 chr2 80913805 80913945 -172342638 - L2 LINE L2 -1 3271 3136 281 314 76 23 chr2 80914170 80914342 -172342241 - MER5A DNA MER1_type -5 184 4 486 190 35 9 chr2 80914479 80914595 -172341988 + MER33 DNA MER1_type 45 163 -161 615 283 27 49 chr2 81014601 81014824 -172241759 - MER58A DNA MER1_type -5 219 2 287 266 16 0 chr2 81014919 81014983 -172241600 + L1M4b LINE L1 19 83 -6776 1380 147 18 5 chr2 81015150 81015374 -172241209 + MER61B LTR ERV1 199 425 0 1698 266 142 4 chr2 81015374 81015840 -172240743 + L1M4b LINE L1 124 653 -6206 243 282 115 0 chr2 81016316 81016394 -172240189 - L1MC/D LINE L1 -2212 5596 5510 203 57 19 57 chr2 81016796 81016849 -172239734 + (TA)n Simple_repeat Simple_repeat 1 51 0 218 112 67 11 chr2 81016965 81017054 -172239529 + (TA)n Simple_repeat Simple_repeat 2 95 0 753 174 26 63 chr2 81017054 81017244 -172239339 + L1MA9 LINE L1 5759 5941 -371 3536 279 37 38 chr2 81017355 81019034 -172237549 - L1MC/D LINE L1 -1098 5048 3371 2135 133 0 0 chr2 81019346 81019648 -172236935 - AluSq SINE Alu -11 302 1 221 330 126 39 chr2 81019681 81019784 -172236799 + L2 LINE L2 3161 3272 0 31 26 0 0 chr2 81019996 81020034 -172236549 + AT_rich Low_complexity Low_complexity 1 38 0 195 188 0 0 chr2 81020701 81020749 -172235834 + (TA)n Simple_repeat Simple_repeat 1 48 0 407 339 58 25 chr2 81020858 81021132 -172235451 - L1M4 LINE L1 -2446 3700 3418 2051 129 0 7 chr2 81021140 81021443 -172235140 + AluSx SINE Alu 1 301 -11 28 29 0 0 chr2 81021714 81021749 -172234834 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr2 81021966 81021989 -172234594 + AT_rich Low_complexity Low_complexity 1 23 0 27 49 0 0 chr2 81023364 81023405 -172233178 + AT_rich Low_complexity Low_complexity 1 41 0 29 60 0 0 chr2 81023552 81023602 -172232981 + AT_rich Low_complexity Low_complexity 1 50 0 23 68 0 0 chr2 81024140 81024184 -172232399 + AT_rich Low_complexity Low_complexity 1 44 0 362 386 29 0 chr2 81024484 81024655 -172231928 + L2 LINE L2 2761 2936 -378 203 200 0 22 chr2 81024782 81024827 -172231756 + (CATA)n Simple_repeat Simple_repeat 1 44 0 1967 169 60 38 chr2 81025038 81025457 -172231126 + MSTC LTR MaLR 1 428 0 440 318 77 56 chr2 81026497 81027056 -172229527 + L1M4 LINE L1 1838 2525 -4432 1242 132 101 0 chr2 81027434 81027662 -172228921 - L1PA13 LINE L1 -5 6158 5908 3778 131 24 5 chr2 81027804 81028462 -172228121 + L1MA2 LINE L1 5634 6304 0 1506 197 65 22 chr2 81028484 81028819 -172227764 - MSTD LTR MaLR -52 334 1 199 53 26 26 chr2 81028922 81028960 -172227623 + (TA)n Simple_repeat Simple_repeat 1 38 0 1252 145 40 4 chr2 81029009 81029258 -172227325 + L1MA3 LINE L1 6048 6305 0 1672 28 0 14 chr2 81030731 81030942 -172225641 + L1PA2 LINE L1 5948 6155 0 1718 185 0 3 chr2 81031684 81031976 -172224607 - AluJo SINE Alu -7 305 15 40 59 0 0 chr2 81032022 81032090 -172224493 + AT_rich Low_complexity Low_complexity 1 68 0 258 201 34 0 chr2 81032160 81032236 -172224347 + L1M4 LINE L1 4317 4399 -2558 227 213 173 0 chr2 81032875 81032950 -172223633 - L1ME LINE L1 -472 5649 5562 680 107 39 34 chr2 81033121 81033299 -172223284 + GA-rich Low_complexity Low_complexity 2 180 0 343 88 99 22 chr2 81033311 81033402 -172223181 + GA-rich Low_complexity Low_complexity 3 100 0 225 361 21 10 chr2 81033942 81034039 -172222544 + MIR SINE MIR 10 107 -155 4493 78 2 0 chr2 81034059 81034650 -172221933 - L1PA6 LINE L1 -2 6152 5561 1366 315 87 52 chr2 81034654 81035448 -172221135 - HERV16 LTR ERVL -2501 2495 1674 569 251 6 48 chr2 81035493 81035660 -172220923 - LTR16A LTR ERVL -105 345 186 1560 168 88 23 chr2 81035715 81036066 -172220517 + THE1C LTR MaLR 1 374 -1 347 319 111 22 chr2 81036402 81036763 -172219820 + L1ME LINE L1 5315 5707 -455 4981 209 124 76 chr2 81037184 81037969 -172218614 + MER52A LTR ERV1 49 795 -960 1956 130 17 13 chr2 81037969 81038269 -172218314 + AluSg SINE Alu 1 301 -9 4981 209 124 76 chr2 81038269 81039112 -172217471 + MER52A LTR ERV1 795 1755 0 1973 141 0 3 chr2 81039296 81039600 -172216983 + AluY SINE Alu 1 303 -8 333 378 111 18 chr2 81039681 81040067 -172216516 - L2 LINE L2 -907 2407 1986 2398 75 0 0 chr2 81040241 81040536 -172216047 + AluY SINE Alu 1 295 -16 4160 183 44 5 chr2 81041749 81042616 -172213967 - L1 LINE L1 -776 6789 5889 4910 190 92 17 chr2 81042616 81043360 -172213223 - L1 LINE L1 -2550 5015 4328 2184 92 0 3 chr2 81043360 81043714 -172212869 - AluY SINE Alu 0 353 1 4910 190 92 17 chr2 81043714 81044269 -172212314 - L1 LINE L1 -3237 4328 3816 318 26 0 0 chr2 81044269 81044308 -172212275 + (TG)n Simple_repeat Simple_repeat 2 40 0 4910 190 92 17 chr2 81044308 81045217 -172211366 - L1 LINE L1 -3749 3816 2643 2156 200 9 4 chr2 81045217 81045671 -172210912 + L1P LINE L1 4824 5279 -867 24 53 0 0 chr2 81045920 81045958 -172210625 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr2 81046113 81046143 -172210440 + AT_rich Low_complexity Low_complexity 1 30 0 927 234 4 48 chr2 81046364 81046591 -172209992 - MER58A DNA MER1_type -1 223 7 224 305 143 26 chr2 81048197 81048351 -172208232 - L2 LINE L2 -1 3271 3100 3324 184 20 8 chr2 81048553 81049206 -172207377 - L1P LINE L1 -969 5177 4517 * 3495 100 31 6 chr2 81049205 81049724 -172206859 + L1PA12 LINE L1 5578 6109 -59 25 31 0 0 chr2 81050011 81050043 -172206540 + AT_rich Low_complexity Low_complexity 1 32 0 634 272 27 45 chr2 81050574 81050798 -172205785 - MER58A DNA MER1_type -3 221 2 353 250 14 0 chr2 81050885 81050957 -172205626 + L1M4 LINE L1 11 83 -6776 1416 138 18 5 chr2 81051124 81051348 -172205235 + MER61B LTR ERV1 199 425 0 1735 260 142 4 chr2 81051348 81051814 -172204769 + L1M4 LINE L1 124 653 -6206 469 311 84 22 chr2 81051976 81052249 -172204334 + L1M4 LINE L1 3955 4244 -2713 346 218 50 10 chr2 81052249 81052350 -172204233 + L1ME4a LINE L1 5815 5919 -251 3114 100 2 2 chr2 81052618 81053079 -172203504 + L1PA6 LINE L1 5698 6158 0 436 218 82 0 chr2 81053083 81053193 -172203390 + L1ME4a LINE L1 6000 6118 -3 2826 3 0 0 chr2 81053331 81053640 -172202943 + AluYa5 SINE Alu 1 309 -2 1223 256 65 27 chr2 81053690 81054170 -172202413 - L1M4 LINE L1 -1275 4871 4374 1045 117 0 0 chr2 81054178 81054332 -172202251 - AluY SINE Alu -5 306 153 236 308 65 34 chr2 81054336 81054657 -172201926 - L1M4 LINE L1 -2930 3216 2886 2146 133 3 25 chr2 81055221 81055581 -172201002 + L1PA16 LINE L1 5806 6157 -9 803 149 0 0 chr2 81055912 81056026 -172200557 + AluJb SINE Alu 1 114 -198 1998 188 62 5 chr2 81056711 81057100 -172199483 - MSTB LTR MaLR -13 413 3 1421 245 61 43 chr2 81057847 81058340 -172198243 + MLT1H1 LTR MaLR 1 502 -53 288 0 0 0 chr2 81058440 81058472 -172198111 + (CA)n Simple_repeat Simple_repeat 2 33 0 183 80 0 0 chr2 81058743 81058768 -172197815 + (TTTTC)n Simple_repeat Simple_repeat 4 28 0 411 321 25 20 chr2 81060380 81060576 -172196007 - L1M4 LINE L1 -2139 4007 3811 306 330 55 16 chr2 81060647 81060829 -172195754 + MLT1J LTR MaLR 2 190 -321 2462 81 3 0 chr2 81061876 81062183 -172194400 - AluY SINE Alu -3 308 1 200 294 0 0 chr2 81062571 81062622 -172193961 - L3 LINE CR1 -221 1356 1306 22 0 0 0 chr2 81062754 81062776 -172193807 + AT_rich Low_complexity Low_complexity 1 22 0 2093 249 30 23 chr2 81063265 81064000 -172192583 - L1MC4a LINE L1 -14 7794 7055 2290 138 22 78 chr2 81064307 81064923 -172191660 - MER4E LTR ERV1 -2 777 1 255 215 62 0 chr2 81064924 81064989 -172191594 - L1MD3 LINE L1 -1004 6991 6923 292 318 9 0 chr2 81065024 81065134 -172191449 - L1MC4 LINE L1 -1422 6620 6510 1037 180 69 5 chr2 81065167 81065384 -172191199 + LOR1b LTR ERV1 1 231 -230 1124 169 128 31 chr2 81065389 81065729 -172190854 - MER84 LTR ERVI -5 502 40 2045 101 3 83 chr2 81065729 81066067 -172190516 - AluSq SINE Alu -2 311 1 1124 169 128 31 chr2 81066067 81066110 -172190473 - MER84 LTR ERVI -467 40 3 355 123 82 14 chr2 81066110 81066180 -172190403 - MER84 LTR ERVI -432 75 1 1356 141 8 13 chr2 81066182 81066416 -172190167 + LOR1a LTR ERV1 265 497 0 541 282 60 53 chr2 81066420 81066838 -172189745 - L1M4 LINE L1 -1349 4797 4377 1161 161 83 0 chr2 81066856 81067098 -172189485 + MER4E LTR ERV1 1 262 -504 4900 76 42 25 chr2 81067414 81067991 -172188592 + MER4E LTR ERV1 1 596 -170 4729 57 7 0 chr2 81067991 81068574 -172188009 + LTR14C LTR ERVK 1 587 0 4900 76 42 25 chr2 81068574 81068749 -172187834 + MER4E LTR ERV1 596 766 0 835 335 30 12 chr2 81068755 81068883 -172187700 - L1M4 LINE L1 -1794 4352 4228 1334 239 32 101 chr2 81068883 81069280 -172187303 - LTR9 LTR ERV1 0 612 276 1795 177 3 6 chr2 81069280 81069591 -172186992 + AluSx SINE Alu 3 312 0 1334 239 32 101 chr2 81069591 81069850 -172186733 - LTR9 LTR ERV1 -336 276 1 835 335 30 12 chr2 81069850 81070392 -172186191 - L1M4 LINE L1 -1918 4228 3670 6668 71 21 0 chr2 81070880 81072886 -172183697 + L1PA7 LINE L1 4051 6154 0 499 305 74 58 chr2 81072895 81073328 -172183255 - L1M4 LINE L1 -2982 3164 2725 1493 190 13 30 chr2 81073358 81073658 -172182925 + AluJo SINE Alu 14 308 -4 15833 44 1 0 chr2 81073814 81075887 -172180696 - L1P LINE L1 -1732 4414 2339 300 276 35 60 chr2 81075903 81076019 -172180564 - MER77 LTR ERV1 -234 371 259 739 220 25 0 chr2 81076193 81076352 -172180231 + MER5A DNA MER1_type 26 188 -1 211 171 0 80 chr2 81077573 81077607 -172178976 + A-rich Low_complexity Low_complexity 5 40 -45 2128 99 14 0 chr2 81077607 81077889 -172178694 + AluSp SINE Alu 2 287 -26 211 171 0 80 chr2 81077889 81077942 -172178641 + A-rich Low_complexity Low_complexity 40 85 0 430 298 89 2 chr2 81078120 81078302 -172178281 + MIR SINE MIR 19 216 -46 1288 171 0 0 chr2 81078354 81078599 -172177984 - LTR24B LTR ERV1 -7 569 325 980 198 0 11 chr2 81078609 81078786 -172177797 - AluJo SINE Alu -9 303 129 1016 98 0 0 chr2 81078808 81078940 -172177643 + AluY SINE Alu 1 132 -179 615 205 8 0 chr2 81078952 81079069 -172177514 - AluJo SINE Alu -192 120 3 1815 143 28 3 chr2 81079071 81079393 -172177190 - LTR24B LTR ERV1 -239 337 8 6058 162 39 13 chr2 81079497 81080099 -172176484 - LTR49-int LTR ERV1 -667 5664 5079 210 37 0 0 chr2 81080099 81080126 -172176457 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6058 162 39 13 chr2 81080126 81080761 -172175822 - LTR49-int LTR ERV1 -1252 5079 4395 600 168 0 0 chr2 81080862 81080981 -172175602 + L1P LINE L1 5222 5340 -806 322 247 39 0 chr2 81080982 81081059 -172175524 + FRAM SINE Alu 68 147 -19 2227 218 58 24 chr2 81081116 81082044 -172174539 + MER57-int LTR ERV1 1093 1923 -3013 296 241 30 63 chr2 81082046 81082233 -172174350 + MER57-int LTR ERV1 1560 4008 -3529 4056 157 18 6 chr2 81082237 81082950 -172173633 + MER50 LTR ERV1 1 722 -12 10446 157 12 21 chr2 81082950 81084812 -172171771 + MER50-int LTR ERV1 7 1850 -5355 5102 214 35 47 chr2 81084808 81086140 -172170443 + MER50-int LTR ERV1 2788 4104 -3101 * 6150 167 5 1 chr2 81086136 81087154 -172169429 + MER50-int LTR ERV1 6179 7200 -5 2752 186 33 4 chr2 81087155 81087805 -172168778 + MER50 LTR ERV1 10 711 -23 499 204 0 0 chr2 81087953 81088046 -172168537 + AluJ/FLAM SINE Alu 7 99 -213 795 160 21 15 chr2 81088054 81088375 -172168208 + GA-rich Low_complexity Low_complexity 1 322 0 1962 244 80 11 chr2 81088479 81089562 -172167021 - L1MEc LINE L1 -3412 2803 1684 1862 271 58 23 chr2 81089580 81090289 -172166294 - L1MEc LINE L1 -5627 769 36 22 56 0 0 chr2 81090792 81090828 -172165755 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr2 81091037 81091060 -172165523 + AT_rich Low_complexity Low_complexity 1 23 0 40237 39 22 1 chr2 81091132 81097009 -172159574 + L1PA3 LINE L1 22 6024 -131 2243 142 28 17 chr2 81097265 81097625 -172158958 - THE1B LTR MaLR 0 364 1 10939 111 20 0 chr2 81097625 81099173 -172157410 - THE1B-int LTR MaLR 0 1580 2 2240 125 40 14 chr2 81099173 81099521 -172157062 - THE1B LTR MaLR -4 360 1 36 23 0 0 chr2 81099606 81099649 -172156934 + AT_rich Low_complexity Low_complexity 1 43 0 691 282 56 5 chr2 81099700 81099913 -172156670 + MER58A DNA MER1_type 1 224 0 21 0 0 0 chr2 81100358 81100379 -172156204 + AT_rich Low_complexity Low_complexity 1 21 0 1098 140 56 5 chr2 81100918 81101132 -172155451 - L1MA9 LINE L1 0 6312 6088 502 208 8 16 chr2 81101154 81101279 -172155304 - L1MA9 LINE L1 -70 6242 6119 207 0 0 0 chr2 81101511 81101534 -172155049 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2083 94 3 19 chr2 81101534 81101852 -172154731 - L1PA13 LINE L1 -11 6152 5840 252 274 0 24 chr2 81102018 81102102 -172154481 + (CATA)n Simple_repeat Simple_repeat 4 85 0 822 113 0 45 chr2 81102512 81102548 -172154035 - Tigger3(Golem) DNA MER2_type -26 3002 2966 2264 96 79 18 chr2 81102548 81102891 -172153692 - THE1B LTR MaLR 0 364 1 822 113 0 45 chr2 81102891 81102987 -172153596 - Tigger3(Golem) DNA MER2_type -62 2966 2876 3917 151 17 21 chr2 81102987 81103701 -172152882 - MER50 LTR ERV1 -23 711 1 6908 210 19 31 chr2 81103701 81104699 -172151884 - MER50-int LTR ERV1 -5804 1401 423 486 115 0 26 chr2 81104699 81104777 -172151806 + MADE1 DNA Mariner 5 80 0 6908 210 19 31 chr2 81104777 81105186 -172151397 - MER50-int LTR ERV1 -6782 423 11 3218 165 27 17 chr2 81105196 81105797 -172150786 - MER50 LTR ERV1 0 734 128 2451 73 3 0 chr2 81105797 81106100 -172150483 - AluY SINE Alu -7 304 1 1380 105 5 38 chr2 81106100 81106310 -172150273 + THE1A LTR MaLR 153 355 0 4486 115 36 7 chr2 81106310 81107012 -172149571 + THE1A-int LTR MaLR 1 722 -858 2049 179 29 31 chr2 81109210 81109769 -172146814 - MLT2A2 LTR ERVL 0 554 1 1566 199 10 0 chr2 81110253 81110559 -172146024 + AluJo SINE Alu 1 309 -3 189 0 0 0 chr2 81110559 81110580 -172146003 + (CAAGG)n Simple_repeat Simple_repeat 4 24 0 233 0 94 0 chr2 81110580 81110612 -172145971 + A-rich Low_complexity Low_complexity 2 36 0 569 202 42 0 chr2 81110625 81110793 -172145790 + GA-rich Low_complexity Low_complexity 2 176 0 465 125 12 12 chr2 81110793 81110873 -172145710 + (GAAAA)n Simple_repeat Simple_repeat 4 83 0 711 179 24 6 chr2 81110873 81111041 -172145542 + GA-rich Low_complexity Low_complexity 3 173 0 23 0 0 0 chr2 81112009 81112032 -172144551 + AT_rich Low_complexity Low_complexity 1 23 0 2210 108 0 3 chr2 81112971 81113268 -172143315 - AluSg1 SINE Alu -7 302 7 4239 65 154 0 chr2 81113412 81114008 -172142575 + LTR12 LTR ERV1 1 688 0 351 0 0 0 chr2 81114804 81114843 -172141740 + (CA)n Simple_repeat Simple_repeat 1 39 0 486 303 63 44 chr2 81114952 81115223 -172141360 + HAL1 LINE L1 1090 1365 -1142 1013 222 103 47 chr2 81115307 81115735 -172140848 + LTR24B LTR ERV1 75 526 -50 217 48 71 0 chr2 81115931 81115973 -172140610 + A-rich Low_complexity Low_complexity 1 45 0 3468 240 59 41 chr2 81115973 81117444 -172139139 - L1M4 LINE L1 -1948 4198 2701 237 362 0 0 chr2 81117677 81117771 -172138812 + MIR SINE MIR 48 141 -121 27 29 0 0 chr2 81118568 81118602 -172137981 + AT_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr2 81119368 81119390 -172137193 + AT_rich Low_complexity Low_complexity 1 22 0 6218 27 8 0 chr2 81119912 81120660 -172135923 - L1PA3 LINE L1 -1156 4990 4237 7710 19 0 1 chr2 81120660 81121910 -172134673 + L1PA3 LINE L1 4989 6237 0 21 0 0 0 chr2 81121972 81121993 -172134590 + AT_rich Low_complexity Low_complexity 1 21 0 225 0 0 0 chr2 81122483 81122508 -172134075 + (T)n Simple_repeat Simple_repeat 1 25 0 28 29 0 0 chr2 81122935 81122970 -172133613 + AT_rich Low_complexity Low_complexity 1 35 0 787 184 7 33 chr2 81123103 81123310 -172133273 + FRAM SINE Alu 1 203 0 26 64 0 0 chr2 81125387 81125434 -172131149 + AT_rich Low_complexity Low_complexity 1 47 0 22 35 0 0 chr2 81125604 81125633 -172130950 + AT_rich Low_complexity Low_complexity 1 29 0 339 341 90 51 chr2 81126715 81127070 -172129513 + HAL1 LINE L1 1163 1531 -976 379 200 8 80 chr2 81127099 81127224 -172129359 + L1MEd LINE L1 22 137 -5982 428 376 60 23 chr2 81127476 81127912 -172128671 + HAL1 LINE L1 1230 1681 -826 4728 317 85 19 chr2 81128169 81130712 -172125871 + L2 LINE L2 564 3313 0 464 278 42 65 chr2 81131062 81131213 -172125370 + L2 LINE L2 3103 3249 -64 1851 139 0 0 chr2 81131213 81131479 -172125104 - AluSg SINE Alu -3 307 42 464 278 42 65 chr2 81131479 81131543 -172125040 + L2 LINE L2 3249 3313 0 1501 145 87 4 chr2 81132071 81132347 -172124236 + MER4B LTR ERV1 1 299 -311 3412 100 77 0 chr2 81132449 81132940 -172123643 + THE1A-int LTR MaLR 1052 1580 0 2130 128 17 8 chr2 81132941 81133292 -172123291 + THE1A LTR MaLR 2 355 0 3043 292 85 19 chr2 81133478 81133716 -172122867 - L1ME LINE L1 -637 5525 5304 1447 205 39 3 chr2 81133716 81133999 -172122584 - AluJb SINE Alu -19 293 1 3043 292 85 19 chr2 81133999 81135973 -172120610 - L1ME LINE L1 -858 5304 3163 196 269 77 39 chr2 81136971 81137075 -172119508 + MIR SINE MIR 119 226 -36 22 35 0 0 chr2 81138728 81138757 -172117826 + AT_rich Low_complexity Low_complexity 1 29 0 185 132 132 0 chr2 81138950 81138988 -172117595 - MIR SINE MIR -88 174 132 30 45 0 0 chr2 81139046 81139090 -172117493 + AT_rich Low_complexity Low_complexity 1 44 0 595 273 196 5 chr2 81140508 81140717 -172115866 - MIR SINE MIR -6 256 8 220 195 0 0 chr2 81141447 81141488 -172115095 + (TG)n Simple_repeat Simple_repeat 2 42 0 501 195 8 57 chr2 81141867 81141990 -172114593 + AluJb SINE Alu 13 129 -183 591 56 64 28 chr2 81142002 81142255 -172114328 + (TA)n Simple_repeat Simple_repeat 1 262 0 295 193 0 0 chr2 81142439 81142496 -172114087 - MER5B DNA MER1_type 0 178 122 233 319 22 43 chr2 81142627 81142765 -172113818 + MLT1J LTR MaLR 230 364 -147 22 0 0 0 chr2 81142807 81142829 -172113754 + AT_rich Low_complexity Low_complexity 1 22 0 505 381 68 52 chr2 81144374 81144930 -172111653 + HAL1 LINE L1 83 647 -1860 360 268 57 67 chr2 81145142 81145336 -172111247 + HAL1 LINE L1 2309 2500 -7 1593 185 0 27 chr2 81145655 81145952 -172110631 - AluJo SINE Alu -23 289 1 486 298 86 51 chr2 81146185 81146620 -172109963 + MLT1J2 LTR MaLR 3 446 0 246 146 37 0 chr2 81147041 81147123 -172109460 + (TA)n Simple_repeat Simple_repeat 1 85 0 1861 157 0 7 chr2 81147123 81147423 -172109160 - AluJo SINE Alu -9 303 6 1908 150 3 0 chr2 81147742 81148035 -172108548 - AluSx SINE Alu -18 294 1 375 277 109 40 chr2 81149088 81149290 -172107293 - MIR SINE MIR -11 251 36 22 35 0 0 chr2 81149360 81149389 -172107194 + AT_rich Low_complexity Low_complexity 1 29 0 373 178 109 10 chr2 81149433 81149534 -172107049 - Charlie7 DNA MER1_type -1076 1536 1426 640 356 94 32 chr2 81149717 81149866 -172106717 - L2 LINE L2 -338 2976 2838 2384 157 11 18 chr2 81149866 81150313 -172106270 - MER65A LTR ERV1 -1 444 1 640 356 94 32 chr2 81150313 81150954 -172105629 - L2 LINE L2 -476 2838 2137 198 0 0 0 chr2 81151644 81151666 -172104917 + (TG)n Simple_repeat Simple_repeat 1 22 0 354 169 17 0 chr2 81151685 81151744 -172104839 - MER8 DNA MER2_type 0 239 180 1438 155 57 86 chr2 81151765 81152151 -172104432 + THE1C LTR MaLR 1 375 0 648 318 12 0 chr2 81152179 81152352 -172104231 - MER8 DNA MER2_type -64 175 1 304 259 0 37 chr2 81152438 81152519 -172104064 - MIR SINE MIR 0 262 185 4301 107 175 99 chr2 81152526 81153973 -172102610 + pTR5 LTR ERV1 743 2438 0 214 342 39 65 chr2 81153983 81154138 -172102445 - MIR SINE MIR -88 174 24 6458 41 75 2 chr2 81155615 81156851 -172099732 + L1PA5 LINE L1 4856 6152 -2 2437 43 7 0 chr2 81156551 81156853 -172099730 + L1PA5 LINE L1 5851 6154 0 442 250 0 98 chr2 81156903 81157067 -172099516 + MER77 LTR ERV1 443 590 -15 221 250 0 42 chr2 81157220 81157292 -172099291 + GA-rich Low_complexity Low_complexity 1 69 0 1538 214 30 6 chr2 81157364 81157700 -172098883 + MER2 DNA MER2_type 1 344 0 4911 220 34 24 chr2 81159249 81159926 -172096657 + L1MC1 LINE L1 4431 5100 -1233 2118 104 0 4 chr2 81159926 81160206 -172096377 - AluSg SINE Alu -29 281 3 4911 220 34 24 chr2 81160206 81161408 -172095175 + L1MC1 LINE L1 5100 6324 -9 309 51 0 0 chr2 81161429 81161468 -172095115 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 252 212 45 0 chr2 81161588 81161654 -172094929 + L1MC4 LINE L1 7095 7163 -879 986 298 94 16 chr2 81161675 81162283 -172094300 + L1MC4 LINE L1 7269 7923 -119 221 217 0 14 chr2 81162331 81162400 -172094183 + GA-rich Low_complexity Low_complexity 2 69 0 23 105 0 0 chr2 81162605 81162691 -172093892 + AT_rich Low_complexity Low_complexity 1 86 0 720 179 0 62 chr2 81163116 81163261 -172093322 - AluJo SINE Alu -176 136 1 1989 150 3 6 chr2 81163860 81164173 -172092410 + AluSx SINE Alu 1 312 0 227 197 33 0 chr2 81164949 81165010 -172091573 + L1MA8 LINE L1 6225 6287 -4 25 0 0 0 chr2 81165084 81165109 -172091474 + AT_rich Low_complexity Low_complexity 1 25 0 672 202 24 77 chr2 81165414 81165582 -172091001 - FRAM SINE Alu -24 152 1 23 33 0 0 chr2 81165697 81165727 -172090856 + AT_rich Low_complexity Low_complexity 1 30 0 331 323 69 54 chr2 81165744 81166078 -172090505 + L1ME LINE L1 5461 5799 -322 2323 123 55 26 chr2 81166260 81166676 -172089907 + MSTA LTR MaLR 1 428 0 8932 178 20 16 chr2 81166676 81168264 -172088319 + MSTA-int LTR MaLR 1 1598 -53 1572 196 58 6 chr2 81168264 81168590 -172087993 + MER61A LTR ERV1 1 343 0 8932 178 20 16 chr2 81168590 81168645 -172087938 + MSTA-int LTR MaLR 1598 1651 0 2098 124 67 43 chr2 81168645 81169063 -172087520 + MSTA LTR MaLR 1 428 0 27 29 0 0 chr2 81169134 81169168 -172087415 + AT_rich Low_complexity Low_complexity 1 34 0 22 80 0 0 chr2 81169386 81169436 -172087147 + AT_rich Low_complexity Low_complexity 1 50 0 1102 234 70 49 chr2 81169481 81169909 -172086674 - LTR56 LTR ERV1 0 445 9 1269 188 15 83 chr2 81170021 81170357 -172086226 + MER41C LTR ERV1 1 313 -241 241 250 0 62 chr2 81170368 81170464 -172086119 + L1MC4 LINE L1 6614 6703 -1339 680 278 130 32 chr2 81170995 81171636 -172084947 - L1ME3A LINE L1 -237 5929 5263 227 248 59 10 chr2 81171879 81171980 -172084603 - L1 LINE L1 -1133 5013 4908 462 257 188 0 chr2 81172110 81172254 -172084329 + MER5A DNA MER1_type 12 182 -7 201 167 56 0 chr2 81172915 81172969 -172083614 + (TA)n Simple_repeat Simple_repeat 1 57 0 25 0 0 0 chr2 81173458 81173483 -172083100 + AT_rich Low_complexity Low_complexity 1 25 0 26 50 0 0 chr2 81173900 81173940 -172082643 + AT_rich Low_complexity Low_complexity 1 40 0 859 180 46 141 chr2 81174869 81175152 -172081431 - MLT1B LTR MaLR -161 229 3 2297 113 33 28 chr2 81176252 81176614 -172079969 + THE1B LTR MaLR 1 364 0 864 215 76 22 chr2 81176628 81176851 -172079732 + MER41C LTR ERV1 319 553 -1 303 28 0 0 chr2 81177029 81177065 -172079518 + (TG)n Simple_repeat Simple_repeat 2 37 0 36 40 0 0 chr2 81177539 81177589 -172078994 + AT_rich Low_complexity Low_complexity 1 50 0 1698 172 56 14 chr2 81177715 81178075 -172078508 - THE1C LTR MaLR 0 375 1 29 28 0 0 chr2 81178823 81178859 -172077724 + AT_rich Low_complexity Low_complexity 1 36 0 1261 240 58 74 chr2 81179082 81179218 -172077365 + MER110 LTR ERV1 1 138 -353 1725 88 0 9 chr2 81179218 81179446 -172077137 - AluY SINE Alu -13 298 73 1261 240 58 74 chr2 81179446 81179793 -172076790 + MER110 LTR ERV1 138 476 -15 188 309 59 59 chr2 81179973 81180109 -172076474 + L2 LINE L2 2348 2483 -831 950 219 127 55 chr2 81180201 81180726 -172075857 + LTR49 LTR ERV1 1 516 -79 723 145 69 41 chr2 81180761 81180906 -172075677 - FRAM SINE Alu -16 160 12 336 179 48 60 chr2 81180917 81181001 -172075582 + LTR48 LTR ERV1 703 785 -2 2581 35 0 13 chr2 81181017 81181328 -172075255 + AluY SINE Alu 1 307 -4 457 353 103 33 chr2 81181328 81181688 -172074895 + L2 LINE L2 2589 2973 -341 236 194 83 0 chr2 81181717 81181789 -172074794 - MER67C LTR ERV1 -5 705 628 25 51 0 0 chr2 81182379 81182418 -172074165 + AT_rich Low_complexity Low_complexity 1 39 0 824 169 0 0 chr2 81182418 81182542 -172074041 - FLAM_C SINE Alu -7 126 3 1796 215 113 20 chr2 81182711 81183171 -172073412 - MER101B LTR ERV1 -67 503 1 1960 150 0 0 chr2 81185627 81185921 -172070662 - AluSx SINE Alu -18 294 1 875 143 22 11 chr2 81185927 81186109 -172070474 - L1MA6 LINE L1 -5 6295 6112 332 265 10 10 chr2 81186673 81186771 -172069812 - L1MC3 LINE L1 -12 7773 7676 545 200 166 0 chr2 81186774 81186919 -172069664 - MLT1D LTR MaLR 0 505 337 * 1817 147 3 99 chr2 81186916 81187072 -172069511 - MER1B DNA MER1_type -2373 339 238 5740 44 6 1 chr2 81187072 81187778 -172068805 - L1PA5 LINE L1 -2 6152 5444 1817 147 3 99 chr2 81187778 81187996 -172068587 - MER1B DNA MER1_type -2474 238 1 1333 188 39 65 chr2 81187996 81188331 -172068252 - MLT1D LTR MaLR -158 347 22 2055 316 92 38 chr2 81188536 81189837 -172066746 + L2 LINE L2 1943 3313 0 248 169 13 0 chr2 81190844 81190921 -172065662 + (TA)n Simple_repeat Simple_repeat 1 78 0 629 376 112 6 chr2 81190931 81191287 -172065296 + L2 LINE L2 117 510 -2804 25 51 0 0 chr2 81191645 81191684 -172064899 + AT_rich Low_complexity Low_complexity 1 39 0 25 0 0 0 chr2 81193754 81193779 -172062804 + AT_rich Low_complexity Low_complexity 1 25 0 187 404 53 0 chr2 81194129 81194223 -172062360 - L2 LINE L2 -253 3019 2921 1528 234 28 30 chr2 81194344 81194741 -172061842 + MSTD LTR MaLR 1 396 0 305 225 75 25 chr2 81194876 81194996 -172061587 + L1MDa LINE L1 2522 2647 -3893 1047 130 108 5 chr2 81195025 81195210 -172061373 - MER41C LTR ERV1 0 554 351 924 247 82 20 chr2 81195212 81195604 -172060979 + L1MDa LINE L1 4170 4585 -1955 3020 231 53 41 chr2 81195626 81196218 -172060365 + L1MD2 LINE L1 4026 4609 -1750 212 0 36 0 chr2 81196218 81196246 -172060337 + (TTG)n Simple_repeat Simple_repeat 2 30 0 3020 231 53 41 chr2 81196246 81196484 -172060099 + L1MD2 LINE L1 4609 4843 -1516 1335 214 16 46 chr2 81196484 81196788 -172059795 - AluJo SINE Alu -13 299 5 3020 231 53 41 chr2 81196788 81197853 -172058730 + L1MD2 LINE L1 4843 5947 -412 1955 218 11 54 chr2 81197855 81198057 -172058526 + L1MD1 LINE L1 5713 5922 -320 228 35 0 0 chr2 81198057 81198086 -172058497 + (TA)n Simple_repeat Simple_repeat 1 29 0 1914 149 7 0 chr2 81198086 81198382 -172058201 - AluSq SINE Alu -15 298 1 1955 218 11 54 chr2 81198382 81198715 -172057868 + L1MD1 LINE L1 5920 6226 -16 272 284 0 14 chr2 81199375 81199449 -172057134 + CT-rich Low_complexity Low_complexity 3 75 0 309 281 124 0 chr2 81200060 81200181 -172056402 + MIR SINE MIR 102 237 -25 257 239 119 0 chr2 81200557 81200624 -172055959 + L2 LINE L2 3239 3313 0 496 170 10 0 chr2 81201555 81201655 -172054928 - L1MA9 LINE L1 0 6312 6212 337 259 71 0 chr2 81202236 81202321 -172054262 - L2 LINE L2 -24 3289 3199 21 0 0 0 chr2 81202503 81202524 -172054059 + AT_rich Low_complexity Low_complexity 1 21 0 2683 178 31 31 chr2 81202818 81203391 -172053192 + LTR24B LTR ERV1 1 573 -3 1084 183 105 149 chr2 81204930 81205690 -172050893 + LTR8A LTR ERV1 1 727 0 274 303 85 37 chr2 81205854 81206042 -172050541 + HAL1b LINE L1 401 597 -751 1359 237 50 8 chr2 81206221 81206580 -172050003 + MLT1A2 LTR MaLR 1 374 0 354 98 0 0 chr2 81206766 81206817 -172049766 + (TG)n Simple_repeat Simple_repeat 2 52 0 2653 195 17 22 chr2 81207085 81207471 -172049112 - L1MA7 LINE L1 -379 5912 5525 4168 174 31 5 chr2 81207471 81208234 -172048349 - LTR39 LTR ERV1 0 783 1 2653 195 17 22 chr2 81208234 81208589 -172047994 - L1MA7 LINE L1 -766 5525 5170 1508 206 24 22 chr2 81208588 81208957 -172047626 + L1MA7 LINE L1 5922 6291 0 * 256 316 116 26 chr2 81210536 81210726 -172045857 + L2 LINE L2 2146 2352 -962 2645 109 19 0 chr2 81211204 81211571 -172045012 - THE1C LTR MaLR 0 375 2 305 318 159 37 chr2 81213004 81213218 -172043365 + MIR SINE MIR 19 258 -4 30 69 0 0 chr2 81213277 81213335 -172043248 + AT_rich Low_complexity Low_complexity 1 58 0 2047 113 31 6 chr2 81213469 81213859 -172042724 + LTR7 LTR ERV1 1 450 0 22 0 0 0 chr2 81214330 81214352 -172042231 + AT_rich Low_complexity Low_complexity 1 22 0 245 275 122 43 chr2 81214820 81215213 -172041370 - L1M4 LINE L1 -1605 4541 4118 345 308 110 36 chr2 81215397 81216105 -172040478 - L1M4 LINE L1 -2225 3921 3148 526 229 109 0 chr2 81216106 81216281 -172040302 - L1MD3 LINE L1 -15 7980 7787 270 0 0 0 chr2 81216282 81216312 -172040271 + (TG)n Simple_repeat Simple_repeat 1 30 0 2869 240 71 35 chr2 81216326 81216412 -172040171 - L1MD2 LINE L1 -249 6110 6029 2612 83 97 7 chr2 81216412 81216823 -172039760 - LTR7 LTR ERV1 -2 448 1 2869 240 71 35 chr2 81216823 81217939 -172038644 - L1MD2 LINE L1 -330 6029 4872 1432 89 5 0 chr2 81219799 81219990 -172036593 - AluSg/x SINE Alu -17 293 102 734 328 75 16 chr2 81222318 81222705 -172033878 + LTR16A LTR ERVL 35 444 -6 245 377 58 13 chr2 81222743 81222897 -172033686 + LTR16A LTR ERVL 290 450 0 822 206 11 22 chr2 81223152 81223332 -172033251 + LTR28 LTR ERV1 1 178 -842 * 889 219 97 39 chr2 81223308 81223707 -172032876 + LTR27 LTR ERV1 202 567 -69 654 232 0 35 chr2 81223681 81223823 -172032760 + LTR28 LTR ERV1 879 1015 -5 * 1846 142 0 116 chr2 81224032 81224412 -172032171 + MER1B DNA MER1_type 1 336 -1 589 211 0 59 chr2 81225819 81225971 -172030612 - FLAM_C SINE Alu 0 143 1 304 347 88 21 chr2 81226224 81226463 -172030120 + MIR SINE MIR 3 257 -5 21 82 0 0 chr2 81226787 81226836 -172029747 + AT_rich Low_complexity Low_complexity 1 49 0 311 284 135 28 chr2 81228044 81228259 -172028324 + L1M4 LINE L1 2690 2927 -3219 23 0 0 0 chr2 81229353 81229376 -172027207 + AT_rich Low_complexity Low_complexity 1 23 0 257 246 0 0 chr2 81229383 81229444 -172027139 + L1MDb LINE L1 1195 1255 -5154 1081 276 35 13 chr2 81229444 81229759 -172026824 + MLT1A2 LTR MaLR 53 374 0 247 273 127 70 chr2 81229918 81230248 -172026335 + L1MDb LINE L1 1428 1776 -4630 703 284 68 12 chr2 81230255 81230505 -172026078 - ERVL LTR ERVL -4622 1142 879 23 33 0 0 chr2 81230595 81230625 -172025958 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr2 81230760 81230783 -172025800 + AT_rich Low_complexity Low_complexity 1 23 0 21 57 0 0 chr2 81232422 81232457 -172024126 + AT_rich Low_complexity Low_complexity 1 35 0 1298 178 8 27 chr2 81233061 81233320 -172023263 + AluSx SINE Alu 1 254 -58 273 296 25 0 chr2 81234534 81234615 -172021968 - L2 LINE L2 -2 3311 3229 1045 223 0 0 chr2 81234694 81234900 -172021683 + MSTB LTR MaLR 1 206 -220 292 91 0 0 chr2 81235170 81235214 -172021369 - AluSc SINE Alu -2 297 254 1613 97 0 0 chr2 81235214 81235421 -172021162 - AluSg SINE Alu -103 207 1 684 320 79 3 chr2 81235564 81235942 -172020641 - L1ME3A LINE L1 -14 6156 5750 486 197 7 63 chr2 81237866 81238008 -172018575 - L1MC3 LINE L1 -1562 6223 6090 6614 197 69 37 chr2 81238016 81238184 -172018399 - L1MC3 LINE L1 -743 5403 5242 2120 128 3 0 chr2 81238184 81238489 -172018094 - AluSp SINE Alu -7 306 1 6614 197 69 37 chr2 81238489 81240402 -172016181 - L1MC3 LINE L1 -904 5242 4824 2019 255 58 45 chr2 81240424 81241047 -172015536 - MER21B LTR ERV1 -86 777 147 654 315 34 6 chr2 81241047 81241368 -172015215 - L1M4 LINE L1 -3415 2731 2402 11863 152 39 26 chr2 81241368 81243413 -172013170 - Tigger1 DNA MER2_type 0 2418 343 1998 137 21 54 chr2 81243413 81243801 -172012782 + THE1C LTR MaLR 1 375 0 11863 152 39 26 chr2 81243801 81243915 -172012668 - Tigger1 DNA MER2_type -2075 343 232 3590 134 26 12 chr2 81243915 81244165 -172012418 - L1PA16 LINE L1 -307 5859 5614 1784 154 10 3 chr2 81244165 81244457 -172012126 - AluJb SINE Alu -14 298 5 3590 134 26 12 chr2 81244457 81244896 -172011687 - L1PA16 LINE L1 -552 5614 5161 * 3823 250 38 5 chr2 81244894 81245959 -172010624 - L1 LINE L1 -1153 4993 3894 295 279 0 0 chr2 81245984 81246070 -172010513 + L1MB5 LINE L1 2627 2712 -3434 1745 181 13 13 chr2 81246072 81246386 -172010197 - MER1B DNA MER1_type -25 314 1 3365 241 38 73 chr2 81246421 81247288 -172009295 + L1MB5 LINE L1 2757 3543 -2603 2425 53 0 0 chr2 81247288 81247626 -172008957 + AluY SINE Alu 1 338 0 3365 241 38 73 chr2 81247626 81248397 -172008186 + L1MB5 LINE L1 3543 4339 -1807 2826 120 2 0 chr2 81248423 81248848 -172007735 - L1PA8 LINE L1 -1602 4544 4119 6059 112 10 2 chr2 81248848 81250430 -172006153 + L1PA8 LINE L1 4552 6171 -1 3410 220 47 34 chr2 81250430 81252213 -172004370 + L1MB5 LINE L1 4371 6166 -8 1496 167 10 33 chr2 81253780 81254080 -172002503 - AluJo SINE Alu -19 293 1 884 295 72 21 chr2 81254331 81254707 -172001876 - MLT1I LTR MaLR -10 399 5 610 253 7 14 chr2 81256239 81256385 -172000198 - MLT1E LTR MaLR -448 145 1 1211 234 28 14 chr2 81256709 81256995 -171999588 + AluJb SINE Alu 1 290 -12 24 77 0 0 chr2 81257089 81257141 -171999442 + AT_rich Low_complexity Low_complexity 1 52 0 1877 99 46 11 chr2 81257326 81257634 -171998949 + AluSq SINE Alu 6 313 0 343 309 144 14 chr2 81257754 81257893 -171998690 + L2 LINE L2 3116 3272 0 23 0 0 0 chr2 81258448 81258471 -171998112 + AT_rich Low_complexity Low_complexity 1 23 0 1693 253 89 2 chr2 81259150 81259608 -171996975 - MLT1D LTR MaLR -2 503 6 1285 243 40 92 chr2 81259613 81260135 -171996448 - MLT1D-int LTR MaLR 0 1371 877 1309 221 68 128 chr2 81260218 81260780 -171995803 - MLT1D-int LTR MaLR -487 884 357 566 219 0 17 chr2 81260776 81260895 -171995688 - MLT1D-int LTR MaLR -1253 118 2 * 1435 229 76 38 chr2 81260896 81261293 -171995290 - MLT1D LTR MaLR 0 505 94 493 372 55 13 chr2 81264686 81265084 -171991499 - L2 LINE L2 -1317 1997 1583 239 384 33 33 chr2 81265138 81265289 -171991294 - L2 LINE L2 -2836 478 328 1849 161 68 21 chr2 81265782 81266167 -171990416 - MER57A LTR ERV1 0 403 1 524 124 211 25 chr2 81266167 81266367 -171990216 - MER57A-int LTR ERV1 0 7537 7272 557 208 16 16 chr2 81266367 81266492 -171990091 - LTR54B LTR ERV1 -371 127 3 8066 119 34 6 chr2 81266492 81267681 -171988902 - MER57A-int LTR ERV1 -394 7143 5922 1481 234 0 0 chr2 81267681 81267955 -171988628 + L1M1 LINE L1 1294 1567 -5998 8505 165 32 7 chr2 81267960 81270032 -171986551 + L1M1 LINE L1 2046 4169 -3396 189 0 0 0 chr2 81270032 81270053 -171986530 + (T)n Simple_repeat Simple_repeat 1 21 0 2041 116 7 3 chr2 81270731 81271034 -171985549 + AluSx SINE Alu 1 304 -8 4627 211 20 27 chr2 81271457 81272684 -171983899 + L1M1 LINE L1 4157 5374 -2191 1913 190 49 26 chr2 81272708 81273250 -171983333 - MLT2A2 LTR ERVL 0 554 1 2920 194 25 24 chr2 81273253 81273611 -171982972 + L1M1 LINE L1 5389 5752 -1813 2017 128 4 0 chr2 81273611 81273920 -171982663 - AluSx SINE Alu 0 310 1 2920 194 25 24 chr2 81273920 81274194 -171982389 + L1M1 LINE L1 5752 6024 -1541 4514 118 53 17 chr2 81274194 81274960 -171981623 + L1MA3 LINE L1 5512 6305 0 1966 133 44 0 chr2 81275956 81276249 -171980334 - AluSp SINE Alu 0 313 8 21 0 0 31 chr2 81276389 81276400 -171980183 + AT_rich Low_complexity Low_complexity 1 11 -20 2190 104 0 3 chr2 81276400 81276699 -171979884 + AluY SINE Alu 1 298 -13 21 0 0 31 chr2 81276699 81276719 -171979864 + AT_rich Low_complexity Low_complexity 11 31 0 565 334 134 29 chr2 81276952 81277601 -171978982 + L2 LINE L2 1987 2703 -611 1649 171 14 7 chr2 81277842 81278128 -171978455 - AluJb SINE Alu -24 288 1 329 273 14 70 chr2 81278397 81278540 -171978043 - MER46C DNA MER2_type -121 217 83 28 0 0 0 chr2 81278705 81278733 -171977850 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr2 81279755 81279791 -171976792 + AT_rich Low_complexity Low_complexity 1 36 0 944 68 53 0 chr2 81280092 81280224 -171976359 + AluSg/x SINE Alu 172 310 -2 23 0 0 0 chr2 81280879 81280902 -171975681 + AT_rich Low_complexity Low_complexity 1 23 0 1487 175 96 51 chr2 81281362 81281791 -171974792 + LTR7 LTR ERV1 1 448 -2 19828 95 27 12 chr2 81281793 81284745 -171971838 + HERVH LTR ERV1 1 2995 -4718 966 127 7 0 chr2 81284724 81284874 -171971709 + HERVH LTR ERV1 3140 3290 -4423 * 3389 107 4 6 chr2 81284864 81285367 -171971216 + HERVH LTR ERV1 3492 3993 -3720 4294 139 3 3 chr2 81285369 81286031 -171970552 + HERVH LTR ERV1 4488 5149 -2564 1353 124 18 27 chr2 81286028 81286253 -171970330 + HERVH LTR ERV1 5597 5819 -1894 * 2766 66 13 13 chr2 81286251 81286643 -171969940 + HERVH LTR ERV1 7322 7713 0 1425 156 109 67 chr2 81286643 81287073 -171969510 + LTR7 LTR ERV1 1 448 -2 24 53 0 0 chr2 81287211 81287249 -171969334 + AT_rich Low_complexity Low_complexity 1 38 0 29 70 0 0 chr2 81287382 81287439 -171969144 + AT_rich Low_complexity Low_complexity 1 57 0 24 0 0 0 chr2 81287461 81287485 -171969098 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 81287537 81287558 -171969025 + AT_rich Low_complexity Low_complexity 1 21 0 25 51 0 0 chr2 81287689 81287728 -171968855 + AT_rich Low_complexity Low_complexity 1 39 0 1488 155 10 64 chr2 81287897 81288039 -171968544 - MER51A LTR ERV1 0 634 486 1673 144 16 4 chr2 81288039 81288295 -171968288 + AluSx SINE Alu 35 293 -19 1488 155 10 64 chr2 81288295 81288651 -171967932 - MER51A LTR ERV1 -148 486 2 3024 160 69 12 chr2 81288843 81289407 -171967176 + MER4B LTR ERV1 15 610 0 2568 163 109 9 chr2 81289590 81290131 -171966452 + LTR49 LTR ERV1 1 595 0 4190 189 33 23 chr2 81290298 81290661 -171965922 + L1 LINE L1 3624 3982 -2164 3668 199 43 25 chr2 81290661 81291544 -171965039 + MER4D LTR ERV1 3 901 -2 4190 189 33 23 chr2 81291544 81292162 -171964421 + L1 LINE L1 3982 4614 -1532 11423 243 124 18 chr2 81292164 81294398 -171962185 + L1MA4 LINE L1 1 1998 -5740 1719 188 0 22 chr2 81294398 81294717 -171961866 - AluJb SINE Alu 0 312 1 11423 243 124 18 chr2 81294717 81294896 -171961687 + L1MA4 LINE L1 1998 2157 -5581 2022 136 33 7 chr2 81294896 81295198 -171961385 + AluSx SINE Alu 1 310 -2 11423 243 124 18 chr2 81295198 81298216 -171958367 + L1MA4 LINE L1 2157 6279 -1459 5265 147 3 24 chr2 81298216 81298516 -171958067 + L1PA15 LINE L1 4274 4579 -1586 1690 194 0 3 chr2 81298516 81298800 -171957783 - AluJo SINE Alu -29 283 1 5265 147 3 24 chr2 81298800 81300441 -171956142 + L1PA15 LINE L1 4579 6158 -7 11423 243 124 18 chr2 81300441 81301587 -171954996 + L1MA4 LINE L1 6279 7303 -435 345 171 0 0 chr2 81301587 81301657 -171954926 + L1MA4 LINE L1 7663 7732 -6 28 0 0 0 chr2 81301784 81301812 -171954771 + AT_rich Low_complexity Low_complexity 1 28 0 2263 111 3 0 chr2 81301970 81302276 -171954307 - AluSp SINE Alu -6 307 1 5231 185 45 11 chr2 81303341 81304635 -171951948 + L1MC1 LINE L1 4978 6320 -13 1891 198 122 3 chr2 81304635 81305019 -171951564 + L1M1 LINE L1 815 1244 -6321 568 97 0 153 chr2 81305019 81305143 -171951440 + MER51B LTR ERV1 1 105 -272 * 1221 92 6 0 chr2 81305113 81305277 -171951306 + MER51A LTR ERV1 389 553 -81 202 0 91 0 chr2 81305279 81305312 -171951271 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 1727 47 0 0 chr2 81305702 81305917 -171950666 - L1PA5 LINE L1 0 6154 5940 244 80 0 40 chr2 81306277 81306327 -171950256 + (TA)n Simple_repeat Simple_repeat 1 48 0 23 0 0 0 chr2 81306344 81306367 -171950216 + AT_rich Low_complexity Low_complexity 1 23 0 1783 87 19 4 chr2 81306367 81306632 -171949951 - L1MA1 LINE L1 0 6302 6034 312 297 115 66 chr2 81306806 81307153 -171949430 - L1ME LINE L1 -521 5643 5280 32 57 0 0 chr2 81307292 81307345 -171949238 + AT_rich Low_complexity Low_complexity 1 53 0 950 129 36 72 chr2 81307347 81307540 -171949043 - L1PA13 LINE L1 -8 6155 5970 22 70 0 0 chr2 81307721 81307764 -171948819 + AT_rich Low_complexity Low_complexity 1 43 0 378 349 104 2 chr2 81307900 81308295 -171948288 - L1ME LINE L1 -1444 4702 4268 561 285 89 41 chr2 81308369 81308720 -171947863 - L1ME LINE L1 -2004 4142 3762 192 77 0 0 chr2 81308720 81308746 -171947837 + (TA)n Simple_repeat Simple_repeat 1 26 0 561 285 89 41 chr2 81308746 81308853 -171947730 - L1ME LINE L1 -2384 3762 3662 233 290 169 0 chr2 81309541 81309665 -171946918 + MLT1J2 LTR MaLR 21 165 -285 21 71 0 0 chr2 81310172 81310214 -171946369 + AT_rich Low_complexity Low_complexity 1 42 0 1831 125 15 0 chr2 81310566 81310830 -171945753 - AluSq SINE Alu -5 308 41 253 267 0 20 chr2 81311904 81312005 -171944578 + (TATATG)n Simple_repeat Simple_repeat 3 101 0 315 122 0 0 chr2 81313320 81313369 -171943214 + (TA)n Simple_repeat Simple_repeat 1 49 0 693 185 0 8 chr2 81313682 81313784 -171942799 + FLAM_C SINE Alu 1 103 -209 583 76 13 0 chr2 81313784 81313863 -171942720 + MADE1 DNA Mariner 1 80 0 693 185 0 8 chr2 81313863 81313890 -171942693 + FLAM_C SINE Alu 103 129 -183 238 256 26 13 chr2 81314075 81314153 -171942430 + L1M4 LINE L1 4531 4609 -1537 25 65 0 0 chr2 81314380 81314426 -171942157 + AT_rich Low_complexity Low_complexity 1 46 0 193 351 114 9 chr2 81314768 81314882 -171941701 + MIR3 SINE MIR 13 138 -70 22 35 0 0 chr2 81315007 81315036 -171941547 + AT_rich Low_complexity Low_complexity 1 29 0 201 267 27 27 chr2 81315167 81315242 -171941341 - MIR SINE MIR -138 124 50 1940 239 103 24 chr2 81315275 81315957 -171940626 - L1ME2 LINE L1 -2 6162 5427 31 44 0 0 chr2 81317658 81317703 -171938880 + AT_rich Low_complexity Low_complexity 1 45 0 1745 181 0 16 chr2 81318081 81318385 -171938198 + AluSx SINE Alu 3 301 -11 2013 128 6 10 chr2 81319257 81319570 -171937013 + AluSx SINE Alu 1 312 0 1474 213 10 10 chr2 81319772 81320068 -171936515 - AluJb SINE Alu -16 296 1 770 296 69 71 chr2 81320556 81321036 -171935547 + HAL1 LINE L1 36 514 -1993 3725 237 60 107 chr2 81321330 81323498 -171933085 - L1M2 LINE L1 -4197 2910 866 230 91 0 0 chr2 81323504 81323537 -171933046 - L1M2 LINE L1 -6996 34 2 414 268 91 101 chr2 81323570 81324276 -171932307 + HAL1 LINE L1 1043 1741 -766 241 162 0 0 chr2 81324299 81324336 -171932247 - Tigger7 DNA MER2_type -48 2443 2407 27 73 0 0 chr2 81324625 81324680 -171931903 + AT_rich Low_complexity Low_complexity 1 55 0 190 78 33 89 chr2 81324757 81324847 -171931736 + (TTATA)n Simple_repeat Simple_repeat 5 89 0 384 202 60 0 chr2 81324890 81325058 -171931525 + (TA)n Simple_repeat Simple_repeat 1 178 0 58 28 0 0 chr2 81325117 81325189 -171931394 + AT_rich Low_complexity Low_complexity 1 72 0 1994 153 25 0 chr2 81325336 81325657 -171930926 + MER44D DNA MER2_type 221 604 -1 352 300 159 22 chr2 81327205 81327432 -171929151 + MIR SINE MIR 4 261 -1 297 371 10 0 chr2 81328528 81328625 -171927958 - MIR SINE MIR -153 109 12 315 336 121 0 chr2 81329058 81329207 -171927376 + HAL1 LINE L1 152 318 -2189 460 274 112 70 chr2 81329695 81329910 -171926673 + LTR33A LTR ERVL 87 310 -213 264 271 0 0 chr2 81329973 81330043 -171926540 + LTR33A LTR ERVL 404 473 -50 23 33 0 0 chr2 81332801 81332831 -171923752 + AT_rich Low_complexity Low_complexity 1 30 0 889 128 39 25 chr2 81333526 81333810 -171922773 + GA-rich Low_complexity Low_complexity 1 288 0 2250 130 28 3 chr2 81333970 81334323 -171922260 + THE1B LTR MaLR 1 362 -2 3427 129 38 0 chr2 81334408 81334959 -171921624 - L1PA13 LINE L1 -3 6160 5589 1580 128 4 4 chr2 81334995 81335230 -171921353 + AluSq SINE Alu 1 235 -78 13066 151 23 3 chr2 81335438 81337595 -171918988 - Tigger1 DNA MER2_type -205 2213 14 1341 207 39 81 chr2 81337593 81337974 -171918609 - MLT1B LTR MaLR -25 365 1 * 282 29 0 0 chr2 81338456 81338491 -171918092 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 22 70 0 0 chr2 81339091 81339134 -171917449 + AT_rich Low_complexity Low_complexity 1 43 0 309 180 0 0 chr2 81340587 81340637 -171915946 - L1M1 LINE L1 -760 5540 5491 269 336 24 8 chr2 81340926 81341051 -171915532 - MIR SINE MIR -104 158 32 40 0 0 0 chr2 81342233 81342273 -171914310 + AT_rich Low_complexity Low_complexity 1 40 0 310 405 15 5 chr2 81344708 81344908 -171911675 + L2 LINE L2 2557 2758 -556 2389 65 3 3 chr2 81345103 81345412 -171911171 - AluY SINE Alu -2 309 1 30 69 0 0 chr2 81345966 81346024 -171910559 + AT_rich Low_complexity Low_complexity 1 58 0 21 57 0 0 chr2 81346047 81346082 -171910501 + AT_rich Low_complexity Low_complexity 1 35 0 257 164 33 0 chr2 81347647 81347708 -171908875 + L1MA9 LINE L1 5970 6032 -280 239 327 65 28 chr2 81347894 81348001 -171908582 + L2 LINE L2 3148 3258 -14 258 311 0 19 chr2 81348002 81348108 -171908475 + GA-rich Low_complexity Low_complexity 1 104 0 21 89 0 0 chr2 81349241 81349297 -171907286 + AT_rich Low_complexity Low_complexity 1 56 0 2411 119 17 6 chr2 81349544 81349904 -171906679 + THE1B LTR MaLR 1 364 0 9065 113 7 69 chr2 81349904 81351435 -171905148 + THE1B-int LTR MaLR 1 1436 -144 296 89 0 0 chr2 81351552 81351597 -171904986 + Alu SINE Alu 255 299 -3 636 170 0 9 chr2 81351599 81351711 -171904872 - L1P4 LINE L1 -575 5588 5478 3258 144 14 9 chr2 81351714 81352270 -171904313 - L1PB1 LINE L1 0 6151 5593 * 5955 188 17 6 chr2 81352267 81354342 -171902241 - L1PA14 LINE L1 -1 7598 5541 257 68 23 0 chr2 81354362 81354406 -171902177 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 8945 212 11 34 chr2 81354412 81356581 -171900002 - L1PA14 LINE L1 -4124 3460 1334 3337 183 32 11 chr2 81356550 81357167 -171899416 - L1PA14 LINE L1 -6951 630 1 * 7442 201 27 10 chr2 81357168 81359066 -171897517 - L1P5 LINE L1 -544 5607 3673 288 0 0 0 chr2 81359066 81359098 -171897485 + (TTG)n Simple_repeat Simple_repeat 2 33 0 7442 201 27 10 chr2 81359098 81359240 -171897343 - L1P5 LINE L1 -2478 3673 3535 6287 146 91 14 chr2 81359245 81361349 -171895234 - L1PBb LINE L1 -3312 2891 623 198 0 0 0 chr2 81361349 81361371 -171895212 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 6287 146 91 14 chr2 81361371 81361681 -171894902 - L1PBb LINE L1 -5580 623 338 4176 186 10 4 chr2 81361782 81362617 -171893966 - L1 LINE L1 -1151 6057 5218 306 222 96 159 chr2 81362792 81363062 -171893521 - L1 LINE L1 -6069 1140 888 1731 290 55 28 chr2 81363170 81363809 -171892774 - L1 LINE L1 -6314 895 1 207 210 0 80 chr2 81363861 81363961 -171892622 + A-rich Low_complexity Low_complexity 2 93 0 21 0 0 0 chr2 81364045 81364066 -171892517 + AT_rich Low_complexity Low_complexity 1 21 0 1309 259 112 49 chr2 81364189 81364453 -171892130 + L1ME2 LINE L1 4052 4298 -1848 1242 175 12 108 chr2 81364453 81364785 -171891798 + AluJo SINE Alu 1 300 -2 1309 259 112 49 chr2 81364785 81365363 -171891220 + L1ME2 LINE L1 4298 4947 -1199 272 300 0 0 chr2 81365478 81365568 -171891015 - L1MC4 LINE L1 -1339 6703 6614 * 310 269 0 0 chr2 81365560 81365653 -171890930 + L1MC4 LINE L1 6614 6706 -1336 283 264 23 0 chr2 81365584 81365671 -171890912 - L1MC4 LINE L1 -1339 6703 6615 * 201 182 0 0 chr2 81365672 81365705 -171890878 + (TA)n Simple_repeat Simple_repeat 1 33 0 269 190 127 0 chr2 81365708 81365787 -171890796 - L1MC4 LINE L1 -1339 6703 6615 247 294 0 22 chr2 81365812 81365904 -171890679 + L1MC4 LINE L1 6614 6703 -1339 * 251 188 0 0 chr2 81365862 81365910 -171890673 - L1MC4 LINE L1 -1339 6703 6656 1383 282 106 34 chr2 81365939 81366702 -171889881 + L1ME2 LINE L1 5015 5885 -279 1617 172 3 39 chr2 81366702 81367010 -171889573 + AluJo SINE Alu 10 306 -6 1383 282 106 34 chr2 81367010 81367292 -171889291 + L1ME2 LINE L1 5885 6145 -19 2328 256 71 34 chr2 81367495 81368138 -171888445 + L1MC1 LINE L1 2770 3464 -2682 1762 164 52 30 chr2 81368138 81368505 -171888078 + THE1C LTR MaLR 1 375 0 2328 256 71 34 chr2 81368505 81368844 -171887739 + L1MC1 LINE L1 3464 3789 -2357 821 237 40 32 chr2 81368844 81369122 -171887461 - LTR4 LTR ERV1 0 596 317 716 248 52 88 chr2 81369208 81369551 -171887032 - LTR4 LTR ERV1 -239 357 27 4522 230 19 68 chr2 81369594 81371468 -171885115 + L1MC1 LINE L1 3786 5558 -744 941 198 20 20 chr2 81371487 81371689 -171884894 - MLT1A2 LTR MaLR -172 202 1 1997 164 36 3 chr2 81371690 81372055 -171884528 + L1MC1 LINE L1 5563 5939 -394 1813 105 0 92 chr2 81372600 81372914 -171883669 + AluSx SINE Alu 13 297 -15 203 0 37 0 chr2 81374076 81374103 -171882480 + (CA)n Simple_repeat Simple_repeat 2 29 0 508 301 68 11 chr2 81374401 81374577 -171882006 - MIR SINE MIR -48 214 29 230 268 80 0 chr2 81374631 81374743 -171881840 - L1ME4a LINE L1 -5 6116 5996 3134 268 55 21 chr2 81374937 81376160 -171880423 + L1MCb LINE L1 64 1330 -4851 479 253 0 0 chr2 81376161 81376252 -171880331 - AluJ/FLAM SINE Alu -221 91 1 397 295 75 35 chr2 81376415 81376615 -171879968 - MIR SINE MIR -47 215 8 543 178 28 0 chr2 81376926 81377033 -171879550 + FLAM_A SINE Alu 21 130 -12 1807 199 74 70 chr2 81377164 81377677 -171878906 - MLT2B2 LTR ERVL 0 515 1 185 277 0 0 chr2 81377929 81377976 -171878607 - L2 LINE L2 0 3313 3267 388 237 21 21 chr2 81377977 81378074 -171878509 - MER58C DNA MER1_type -3 212 116 246 299 140 37 chr2 81378412 81378519 -171878064 + L2 LINE L2 3154 3271 -1 411 177 0 0 chr2 81428582 81428661 -171827922 - L1 LINE L1 -1460 4686 4608 5180 206 41 89 chr2 81431374 81432938 -171823645 - MER52A LTR ERV1 -43 1712 336 30 45 0 0 chr2 81433810 81433854 -171822729 + AT_rich Low_complexity Low_complexity 1 44 0 27 29 0 0 chr2 81434396 81434430 -171822153 + AT_rich Low_complexity Low_complexity 1 34 0 1830 197 19 19 chr2 81434762 81435127 -171821456 + MLT1A1 LTR MaLR 1 365 0 328 286 43 29 chr2 81435129 81435269 -171821314 + L1ME LINE L1 5504 5645 -525 378 207 27 36 chr2 81435282 81435393 -171821190 - Charlie4 DNA MER1_type -2 1959 1850 22 35 0 0 chr2 81435936 81435965 -171820618 + AT_rich Low_complexity Low_complexity 1 29 0 201 341 61 30 chr2 81436843 81437007 -171819576 + MIR SINE MIR 67 235 -27 621 219 73 0 chr2 81437169 81437306 -171819277 - MER20 DNA MER1_type -72 147 1 318 278 44 0 chr2 81437854 81437944 -171818639 + L1MEd LINE L1 90 183 -5936 31 0 0 0 chr2 81438048 81438079 -171818504 + AT_rich Low_complexity Low_complexity 1 31 0 347 293 103 43 chr2 81439001 81439301 -171817282 - L1ME3A LINE L1 -34 6136 5819 246 136 0 0 chr2 81439554 81439598 -171816985 + (TG)n Simple_repeat Simple_repeat 1 44 0 1376 175 131 18 chr2 81440328 81440665 -171815918 - THE1C LTR MaLR 0 375 1 8366 138 89 16 chr2 81440665 81442135 -171814448 - THE1C-int LTR MaLR 0 1580 3 1689 182 18 32 chr2 81442137 81442517 -171814066 - THE1C LTR MaLR 0 375 1 752 136 32 0 chr2 81442730 81442855 -171813728 - L1PBa LINE L1 -6734 129 1 22 35 0 0 chr2 81442864 81442893 -171813690 + AT_rich Low_complexity Low_complexity 1 29 0 2605 260 55 5 chr2 81443449 81444073 -171812510 + L1MA4 LINE L1 13 667 -6898 8244 212 114 8 chr2 81444076 81446001 -171810582 + L1MA4 LINE L1 1354 3511 -4054 792 32 0 0 chr2 81446001 81446096 -171810487 + (GGAA)n Simple_repeat Simple_repeat 4 98 0 8244 212 114 8 chr2 81446096 81446226 -171810357 + L1MA4 LINE L1 3511 3626 -3939 4897 189 25 6 chr2 81446224 81446771 -171809812 + L1MA4 LINE L1 6642 7220 -499 * 300 102 0 0 chr2 81446771 81446820 -171809763 + (TG)n Simple_repeat Simple_repeat 1 49 0 4897 189 25 6 chr2 81446820 81447311 -171809272 + L1MA4 LINE L1 7220 7700 -19 217 345 23 6 chr2 81447398 81447575 -171809008 + (TA)n Simple_repeat Simple_repeat 1 180 0 1271 206 79 15 chr2 81447750 81448108 -171808475 - MER31A LTR ERV1 0 661 101 280 318 52 23 chr2 81448521 81448650 -171807933 - MIR SINE MIR -57 151 13 474 294 80 16 chr2 81449743 81449930 -171806653 - LTR16A1 LTR ERVL 0 457 259 963 99 8 0 chr2 81450403 81450534 -171806049 - AluY SINE Alu -62 249 118 251 36 18 54 chr2 81450536 81450592 -171805991 + (TTTTA)n Simple_repeat Simple_repeat 2 55 0 10981 25 3 0 chr2 81450604 81452665 -171803918 - L1PA3 LINE L1 -3 6152 4087 4398 24 6 0 chr2 81452665 81453212 -171803371 + L1P LINE L1 2639 3188 -2958 694 115 0 0 chr2 81453212 81453308 -171803275 - AluY SINE Alu -184 127 32 1052 262 38 3 chr2 81453612 81453902 -171802681 + L1MC/D LINE L1 5350 5649 -2159 3219 178 80 35 chr2 81454116 81454862 -171801721 - L1MB5 LINE L1 0 6174 5395 969 266 6 6 chr2 81454864 81455176 -171801407 - L1MB5 LINE L1 -912 5234 4923 400 211 31 19 chr2 81455249 81455410 -171801173 + (TA)n Simple_repeat Simple_repeat 1 163 0 22 35 0 0 chr2 81455949 81455978 -171800605 + AT_rich Low_complexity Low_complexity 1 29 0 9772 88 9 3 chr2 81456742 81458904 -171797679 - L1PA7 LINE L1 -1 6153 3982 263 200 0 27 chr2 81459901 81459976 -171796607 + (CATA)n Simple_repeat Simple_repeat 3 75 0 25 31 0 0 chr2 81460516 81460548 -171796035 + AT_rich Low_complexity Low_complexity 1 32 0 1360 228 26 29 chr2 81460612 81460954 -171795629 - MER58B DNA MER1_type 0 341 1 306 0 0 0 chr2 81462184 81462218 -171794365 + (TG)n Simple_repeat Simple_repeat 2 35 0 2140 120 0 7 chr2 81463378 81463686 -171792897 + AluSg SINE Alu 1 306 -4 310 308 43 39 chr2 81464009 81464243 -171792340 + L1ME LINE L1 5568 5802 -319 21 36 0 0 chr2 81464317 81464345 -171792238 + AT_rich Low_complexity Low_complexity 1 28 0 229 174 0 0 chr2 81465584 81465630 -171790953 + L1MA7 LINE L1 6246 6291 0 374 380 53 58 chr2 81465643 81465885 -171790698 - L2 LINE L2 -2122 1192 950 2217 56 0 14 chr2 81465885 81466196 -171790387 + AluY SINE Alu 1 307 0 374 380 53 58 chr2 81466196 81466610 -171789973 - L2 LINE L2 -2364 950 538 2325 107 0 0 chr2 81466735 81467045 -171789538 + AluSg SINE Alu 1 310 0 198 0 0 0 chr2 81467530 81467552 -171789031 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 2051 173 43 41 chr2 81467565 81468118 -171788465 - MLT2A2 LTR ERVL 0 554 4 699 171 0 0 chr2 81468118 81468235 -171788348 - AluJo SINE Alu -33 279 163 656 184 7 37 chr2 81468255 81468391 -171788192 - AluJo SINE Alu -169 133 2 301 279 0 12 chr2 81470342 81470382 -171786201 + CT-rich Low_complexity Low_complexity 2 41 -45 270 56 0 0 chr2 81470382 81470418 -171786165 + (CA)n Simple_repeat Simple_repeat 2 37 0 301 279 0 12 chr2 81470418 81470463 -171786120 + CT-rich Low_complexity Low_complexity 41 86 0 351 0 0 0 chr2 81470464 81470503 -171786080 + (CA)n Simple_repeat Simple_repeat 2 40 0 21 57 0 0 chr2 81472823 81472858 -171783725 + AT_rich Low_complexity Low_complexity 1 35 0 3607 186 13 20 chr2 81473563 81474354 -171782229 - L1MC2 LINE L1 -9 6335 5551 201 171 0 24 chr2 81475381 81475422 -171781161 + (TAGA)n Simple_repeat Simple_repeat 2 41 0 192 97 0 0 chr2 81475447 81475478 -171781105 + (TG)n Simple_repeat Simple_repeat 2 32 0 1280 194 22 117 chr2 81476202 81476614 -171779969 + MLT1A2 LTR MaLR 1 373 -1 357 109 0 0 chr2 81476717 81476772 -171779811 + (GA)n Simple_repeat Simple_repeat 1 55 0 769 129 8 0 chr2 81477073 81477197 -171779386 - L1PA16 LINE L1 -5 6161 6037 1797 122 15 0 chr2 81477297 81477567 -171779016 - L1PA16 LINE L1 -329 5837 5564 201 320 41 41 chr2 81477956 81478053 -171778530 + MIR SINE MIR 5 101 -161 251 254 34 0 chr2 81479053 81479112 -171777471 - L2 LINE L2 -4 3309 3249 243 0 0 0 chr2 81479118 81479145 -171777438 + (CA)n Simple_repeat Simple_repeat 2 28 0 200 291 0 0 chr2 81479608 81479663 -171776920 + (TATATG)n Simple_repeat Simple_repeat 6 60 0 219 186 0 0 chr2 81479670 81479713 -171776870 + (CATATA)n Simple_repeat Simple_repeat 3 45 0 470 268 131 10 chr2 81479769 81479967 -171776616 + LTR50 LTR ERVL 1 222 -573 369 0 0 0 chr2 81479991 81480032 -171776551 + (TG)n Simple_repeat Simple_repeat 2 42 0 1497 239 96 16 chr2 81480077 81480462 -171776121 - MER76 LTR ERV -254 434 19 338 228 0 118 chr2 81480471 81480598 -171775985 - L1ME2 LINE L1 -139 6025 5914 211 270 17 52 chr2 81480606 81480721 -171775862 - L2 LINE L2 -1664 1650 1540 21 0 0 0 chr2 81480838 81480859 -171775724 + AT_rich Low_complexity Low_complexity 1 21 0 279 294 0 37 chr2 81481562 81481698 -171774885 + L1ME4a LINE L1 5985 6115 -6 29 70 0 0 chr2 81482061 81482118 -171774465 + AT_rich Low_complexity Low_complexity 1 57 0 186 139 28 0 chr2 81482407 81482443 -171774140 - L2 LINE L2 -168 3145 3109 1208 217 43 35 chr2 81482736 81482832 -171773751 + L1MA7 LINE L1 5938 6032 -259 2027 198 10 0 chr2 81482832 81483231 -171773352 + MER57A LTR ERV1 1 403 0 1208 217 43 35 chr2 81483231 81483480 -171773103 + L1MA7 LINE L1 6032 6286 -5 66 35 0 0 chr2 81483712 81483799 -171772784 + AT_rich Low_complexity Low_complexity 1 87 0 27 62 0 0 chr2 81485303 81485351 -171771232 + AT_rich Low_complexity Low_complexity 1 48 0 237 318 56 70 chr2 81485898 81485994 -171770589 + MIR SINE MIR 52 148 -114 1989 83 0 51 chr2 81485994 81486327 -171770256 + AluY SINE Alu 1 311 0 237 318 56 70 chr2 81486327 81486444 -171770139 + MIR SINE MIR 148 262 0 1935 126 3 35 chr2 81486926 81487236 -171769347 + AluJb SINE Alu 9 308 -4 237 212 24 24 chr2 81487463 81487548 -171769035 + L1MC4 LINE L1 6620 6704 -1338 750 135 74 0 chr2 81487602 81487750 -171768833 + L1M2 LINE L1 5369 5527 -773 1997 134 0 0 chr2 81487752 81488035 -171768548 + AluSg SINE Alu 3 285 -25 476 56 14 0 chr2 81488037 81488109 -171768474 + (CA)n Simple_repeat Simple_repeat 2 74 0 183 80 0 0 chr2 81490850 81490875 -171765708 + (TTTC)n Simple_repeat Simple_repeat 4 28 0 882 166 55 11 chr2 81491470 81491651 -171764932 + L1MC2 LINE L1 6134 6322 -22 295 241 37 25 chr2 81491651 81491813 -171764770 + (TA)n Simple_repeat Simple_repeat 1 164 0 261 0 0 0 chr2 81491846 81491875 -171764708 + (TG)n Simple_repeat Simple_repeat 1 29 0 873 233 40 42 chr2 81491875 81492322 -171764261 + L1M4c LINE L1 2226 2674 -3708 1099 195 118 26 chr2 81492324 81492672 -171763911 - L1MA9 LINE L1 -1 6311 5932 1428 261 60 33 chr2 81492698 81493479 -171763104 + L1M4c LINE L1 2938 3739 -2643 9718 95 37 7 chr2 81493622 81495099 -171761484 - L1P LINE L1 -2373 3773 2253 7818 139 21 40 chr2 81495095 81496559 -171760024 + L1P LINE L1 666 2101 -4045 * 2019 108 11 0 chr2 81496992 81497271 -171759312 + AluSp SINE Alu 21 302 -11 21 71 0 0 chr2 81497417 81497459 -171759124 + AT_rich Low_complexity Low_complexity 1 42 0 327 256 43 126 chr2 81497551 81497899 -171758684 - L1MC4a LINE L1 -1557 6251 5933 1836 198 8 40 chr2 81497974 81498374 -171758209 + MLT1B LTR MaLR 4 390 0 384 313 122 51 chr2 81499415 81499767 -171756816 - LTR33 LTR ERVL -18 503 127 414 189 11 11 chr2 81499779 81499874 -171756709 + MLT2D LTR ERVL 1 95 -302 2325 194 30 72 chr2 81499884 81500509 -171756074 - LTR9 LTR ERV1 -13 599 1 1300 219 32 66 chr2 81500509 81500851 -171755732 + MLT2D LTR ERVL 79 408 -6 1612 158 25 79 chr2 81501035 81501218 -171755365 - MER44D DNA MER2_type -1882 609 418 1635 112 112 11 chr2 81501218 81501485 -171755098 + AluSg SINE Alu 1 294 -16 1612 158 25 79 chr2 81501485 81501656 -171754927 - MER44D DNA MER2_type -2073 418 4 728 245 7 7 chr2 81501843 81501994 -171754589 + MER5A DNA MER1_type 36 186 -3 255 88 0 0 chr2 81502125 81502171 -171754412 + L1PA13 LINE L1 6120 6174 0 30 27 0 0 chr2 81502904 81502941 -171753642 + AT_rich Low_complexity Low_complexity 1 37 0 531 243 139 20 chr2 81503520 81503670 -171752913 - L1ME LINE L1 -669 5497 5366 2160 92 3 7 chr2 81503670 81504001 -171752582 - AluY SINE Alu 0 332 3 531 243 139 20 chr2 81504001 81504252 -171752331 - L1ME LINE L1 -800 5366 5050 239 316 13 0 chr2 81504253 81504332 -171752251 + MER96 DNA MER1_type? 1 80 -95 275 342 108 17 chr2 81504365 81504485 -171752098 + L2 LINE L2 3183 3313 0 28 0 0 0 chr2 81504941 81504969 -171751614 + AT_rich Low_complexity Low_complexity 1 28 0 7289 41 0 0 chr2 81504969 81506287 -171750296 - L1PA4 LINE L1 -4 6151 4833 325 233 0 0 chr2 81507073 81507159 -171749424 - L1PB4 LINE L1 -3 6153 6068 673 257 31 55 chr2 81508262 81508633 -171747950 + L1M4c LINE L1 1041 1507 -4865 339 25 0 0 chr2 81508917 81508957 -171747626 + (CA)n Simple_repeat Simple_repeat 1 40 0 310 342 57 0 chr2 81509779 81509937 -171746646 - L1ME LINE L1 -1095 5051 4885 5055 171 28 24 chr2 81510003 81510801 -171745782 - L1MA4A LINE L1 -5 6298 5505 1666 178 7 20 chr2 81510801 81511105 -171745478 - AluJb SINE Alu -8 304 5 5055 171 28 24 chr2 81511105 81512004 -171744579 - L1MA4A LINE L1 -798 5505 4586 201 67 44 22 chr2 81512095 81512140 -171744443 + (TA)n Simple_repeat Simple_repeat 1 46 0 374 333 34 15 chr2 81512192 81512396 -171744187 - L1ME LINE L1 -1921 4225 4018 22 35 0 0 chr2 81513520 81513549 -171743034 + AT_rich Low_complexity Low_complexity 1 29 0 661 327 141 24 chr2 81516465 81516890 -171739693 + L2 LINE L2 189 663 -2651 2027 135 54 11 chr2 81517058 81517407 -171739176 - THE1B LTR MaLR 0 364 1 24 67 0 0 chr2 81517601 81517646 -171738937 + AT_rich Low_complexity Low_complexity 1 45 0 296 197 0 26 chr2 81518016 81518092 -171738491 + (CATATA)n Simple_repeat Simple_repeat 4 77 0 4667 152 63 0 chr2 81518823 81519701 -171736882 + L1PA16 LINE L1 5231 6162 -4 312 27 0 0 chr2 81520546 81520583 -171736000 + (CA)n Simple_repeat Simple_repeat 2 38 0 21 0 0 0 chr2 81520630 81520651 -171735932 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 81520851 81520873 -171735710 + AT_rich Low_complexity Low_complexity 1 22 0 847 211 0 0 chr2 81520925 81521072 -171735511 - FRAM SINE Alu -19 157 11 255 238 16 48 chr2 81521078 81521141 -171735442 - AluS SINE Alu -240 63 3 239 293 30 23 chr2 81521509 81521642 -171734941 - L1MC/D LINE L1 -1982 5826 5693 422 245 95 43 chr2 81521767 81522020 -171734563 - L1MC/D LINE L1 -2287 5521 5256 23 0 0 0 chr2 81522127 81522150 -171734433 + AT_rich Low_complexity Low_complexity 1 23 0 305 325 38 13 chr2 81522197 81522354 -171734229 - L1MC/D LINE L1 -1081 5065 4905 28 29 0 0 chr2 81522412 81522447 -171734136 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr2 81522845 81522867 -171733716 + AT_rich Low_complexity Low_complexity 1 22 0 225 311 40 0 chr2 81524001 81524075 -171732508 - MIR SINE MIR -137 125 49 1975 145 0 0 chr2 81525698 81526008 -171730575 + AluSx SINE Alu 3 312 0 425 262 41 90 chr2 81526375 81526619 -171729964 + HAL1 LINE L1 972 1203 -1304 282 350 8 24 chr2 81526680 81526803 -171729780 + MER91B DNA MER1_type 14 134 -56 336 354 9 0 chr2 81526895 81527008 -171729575 + L1ME LINE L1 396 509 -5907 2000 309 54 21 chr2 81527793 81528496 -171728087 + L1M3b LINE L1 6 731 -5550 874 307 85 60 chr2 81528557 81529169 -171727414 + L1M3b LINE L1 671 1297 -4984 450 115 32 26 chr2 81529241 81529397 -171727186 + (TA)n Simple_repeat Simple_repeat 1 157 0 324 192 0 41 chr2 81529399 81529472 -171727111 + L1ME LINE L1 1995 2064 -4362 229 133 22 0 chr2 81529474 81529519 -171727064 + (TA)n Simple_repeat Simple_repeat 1 46 0 317 198 11 77 chr2 81529522 81529613 -171726970 + L1ME LINE L1 1996 2080 -4346 261 157 14 14 chr2 81529619 81529689 -171726894 + (TA)n Simple_repeat Simple_repeat 1 70 0 25 65 0 0 chr2 81529692 81529738 -171726845 + AT_rich Low_complexity Low_complexity 1 46 0 380 290 158 50 chr2 81530508 81530906 -171725677 - LTR16A LTR ERVL 0 457 18 274 280 100 82 chr2 81530969 81531248 -171725335 + L1M3d LINE L1 3 286 -5605 2600 160 59 137 chr2 81531259 81532039 -171724544 + L1MB1 LINE L1 5222 5940 -228 244 333 24 12 chr2 81532057 81532141 -171724442 + MER5B DNA MER1_type 90 174 -4 21 0 0 0 chr2 81532476 81532497 -171724086 + AT_rich Low_complexity Low_complexity 1 21 0 251 303 128 0 chr2 81532531 81532640 -171723943 + MLT1I LTR MaLR 40 162 -247 3454 168 52 33 chr2 81532974 81533707 -171722876 + Tigger2 DNA MER2_type 1 747 -1971 1271 148 89 0 chr2 81533769 81534006 -171722577 + Tigger2 DNA MER2_type 2451 2708 -10 250 274 68 26 chr2 81534027 81534217 -171722366 - L1MC/D LINE L1 -1924 5884 5687 24 32 0 0 chr2 81535592 81535623 -171720960 + AT_rich Low_complexity Low_complexity 1 31 0 27 29 0 0 chr2 81535728 81535762 -171720821 + AT_rich Low_complexity Low_complexity 1 34 0 1749 190 94 10 chr2 81535796 81536191 -171720392 - MSTA LTR MaLR 0 428 1 28 29 0 0 chr2 81536573 81536608 -171719975 + AT_rich Low_complexity Low_complexity 1 35 0 25 65 0 0 chr2 81536967 81537013 -171719570 + AT_rich Low_complexity Low_complexity 1 46 0 245 257 68 0 chr2 81539003 81539077 -171717506 - MLT1H LTR MaLR -326 223 145 209 260 48 10 chr2 81539417 81539521 -171717062 + A-rich Low_complexity Low_complexity 3 110 0 203 193 0 18 chr2 81539962 81540019 -171716564 + A-rich Low_complexity Low_complexity 4 59 0 925 302 46 33 chr2 81540029 81540483 -171716100 + L1MC/D LINE L1 17 476 -5947 259 172 0 35 chr2 81540873 81540931 -171715652 + MER58 DNA MER1_type 40 95 -120 378 351 126 15 chr2 81541042 81541313 -171715270 + L1MC/D LINE L1 803 1103 -5320 1243 245 103 3 chr2 81541491 81542023 -171714560 - MER82 DNA MER2_type -1 652 11 683 278 100 55 chr2 81542118 81542642 -171713941 + L1MC/D LINE L1 1256 1755 -5367 192 40 0 0 chr2 81542642 81542667 -171713916 + (GA)n Simple_repeat Simple_repeat 2 26 0 683 278 100 55 chr2 81542667 81543191 -171713392 + L1MC/D LINE L1 1755 2543 -4579 1250 281 13 6 chr2 81543298 81543615 -171712968 + L1M3e LINE L1 6 324 -6706 5031 240 28 8 chr2 81543621 81545032 -171711551 + L1MC/D LINE L1 3461 4898 -2043 261 149 0 0 chr2 81545033 81545080 -171711503 + L1M2 LINE L1 5734 5780 -520 338 305 50 0 chr2 81545108 81545249 -171711334 + L1MC/D LINE L1 6210 6357 -2246 649 191 24 24 chr2 81545633 81545801 -171710782 + MER53 DNA DNA 20 187 -2 328 217 0 37 chr2 81546457 81546618 -171709965 + (TA)n Simple_repeat Simple_repeat 2 156 0 246 274 0 0 chr2 81546721 81546772 -171709811 + polypyrimidine Low_complexity Low_complexity 5 55 0 1627 63 90 0 chr2 81547312 81547535 -171709048 - AluY SINE Alu -1 310 68 1085 165 24 10 chr2 81547535 81547741 -171708842 + L1PA15 LINE L1 5957 6165 0 25 31 0 0 chr2 81549507 81549539 -171707044 + AT_rich Low_complexity Low_complexity 1 32 0 1544 314 97 65 chr2 81549769 81549860 -171706723 + L2 LINE L2 1947 2034 -1279 2184 90 0 37 chr2 81549860 81550183 -171706400 + AluY SINE Alu 1 311 0 1544 314 97 65 chr2 81550183 81551409 -171705174 + L2 LINE L2 2034 3313 0 209 326 142 7 chr2 81551493 81551634 -171704949 + L2 LINE L2 3150 3309 -4 24 0 0 0 chr2 81553911 81553935 -171702648 + AT_rich Low_complexity Low_complexity 1 24 0 1988 146 82 0 chr2 81554197 81554527 -171702056 + LTR18A LTR ERVL 1 357 0 21534 180 11 6 chr2 81554542 81560554 -171696029 + HERVL18 LTR ERVL 10 6047 0 2029 161 43 0 chr2 81560555 81560860 -171695723 + LTR18A LTR ERVL 1 318 -39 2963 204 36 16 chr2 81561169 81561842 -171694741 - L1MB4 LINE L1 0 6180 5495 807 222 67 40 chr2 81561833 81562058 -171694525 - L1M3 LINE L1 -478 5702 5472 * 3060 233 101 63 chr2 81562078 81563169 -171693414 - LTR28 LTR ERV1 0 1659 1 1852 265 49 15 chr2 81563169 81564112 -171692471 - L1M3 LINE L1 -709 5471 4493 1922 206 41 30 chr2 81564310 81565348 -171691235 + L1MA6 LINE L1 2463 3488 -4231 1933 100 0 0 chr2 81565348 81565598 -171690985 + AluSc SINE Alu 47 296 -13 1922 206 41 30 chr2 81565598 81569421 -171687162 + L1MA6 LINE L1 3488 7560 -159 * 2505 211 5 25 chr2 81569415 81570027 -171686556 + L1 LINE L1 3961 4560 -1586 1197 261 60 54 chr2 81570367 81570830 -171685753 + LTR40a LTR ERVL 3 468 -51 183 270 0 32 chr2 81571203 81571266 -171685317 + L3 LINE CR1 674 734 -843 26 50 0 0 chr2 81571524 81571564 -171685019 + AT_rich Low_complexity Low_complexity 1 40 0 221 388 8 0 chr2 81571668 81571789 -171684794 - MIR SINE MIR -49 213 92 25 51 0 0 chr2 81572500 81572539 -171684044 + AT_rich Low_complexity Low_complexity 1 39 0 303 93 0 0 chr2 81573504 81573547 -171683036 + (A)n Simple_repeat Simple_repeat 1 43 0 239 323 75 43 chr2 81575023 81575184 -171681399 + L1PB4 LINE L1 395 560 -5644 315 282 0 0 chr2 81575242 81575320 -171681263 + L1PB4 LINE L1 716 793 -5410 11178 237 44 7 chr2 81575403 81580092 -171676491 + L1PB4 LINE L1 799 5669 -544 493 91 0 69 chr2 81580107 81580216 -171676367 - L1PA8 LINE L1 0 6142 6036 2337 217 23 4 chr2 81580216 81580742 -171675841 + L1PB4 LINE L1 5664 6199 -14 724 144 42 66 chr2 81580750 81580889 -171675694 + L1 LINE L1 3440 3576 -2570 1868 225 29 31 chr2 81580889 81581343 -171675240 - MSTB2 LTR MaLR -4 453 1 724 144 42 66 chr2 81581343 81581370 -171675213 + L1 LINE L1 3576 3602 -2544 2135 223 36 7 chr2 81581401 81581952 -171674631 + L1 LINE L1 3887 4453 -1693 17040 175 25 10 chr2 81581961 81584339 -171672244 + L1MA3 LINE L1 688 3029 -4695 228 111 0 0 chr2 81584339 81584375 -171672208 + (TTAGGG)n Simple_repeat Simple_repeat 3 38 0 17040 175 25 10 chr2 81584375 81588924 -171667659 + L1MA3 LINE L1 3029 7724 0 1266 267 38 38 chr2 81588910 81589537 -171667046 + L1M4 LINE L1 951 1580 -4962 * 2707 143 70 15 chr2 81589537 81590012 -171666571 + MER84 LTR ERV1 5 505 -2 1266 267 38 38 chr2 81590012 81590039 -171666544 + L1M4 LINE L1 1579 1605 -4937 1807 247 29 10 chr2 81590042 81590552 -171666031 + L1M4 LINE L1 4777 5296 -1348 377 300 130 60 chr2 81591744 81592199 -171664384 + MLT1G LTR MaLR 73 590 0 231 338 12 12 chr2 81592217 81592297 -171664286 + MLT1K LTR MaLR 171 250 -338 205 161 0 0 chr2 81593703 81593734 -171662849 + (TG)n Simple_repeat Simple_repeat 2 32 0 2048 120 7 0 chr2 81594115 81594406 -171662177 + AluSx SINE Alu 1 293 -19 2314 266 70 5 chr2 81594695 81595335 -171661248 - MER76 LTR ERV 0 688 7 253 364 0 0 chr2 81596029 81596128 -171660455 - MLT1J LTR MaLR -303 208 110 2335 125 25 14 chr2 81597332 81597692 -171658891 - THE1B LTR MaLR 0 364 1 2890 87 5 0 chr2 81597692 81598083 -171658500 - THE1B-int LTR MaLR 0 1580 1188 2340 195 89 0 chr2 81598080 81598573 -171658010 - L1 LINE L1 -1158 4988 4452 * 3438 169 49 21 chr2 81598573 81598773 -171657810 + L1MA4 LINE L1 5555 5748 -552 213 39 0 0 chr2 81598773 81598799 -171657784 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 3438 169 49 21 chr2 81598799 81599318 -171657265 + L1MA4 LINE L1 5748 6294 -6 1416 161 79 32 chr2 81599737 81600078 -171656505 + MER46B DNA MER2_type 5 236 0 300 150 0 75 chr2 81604022 81604059 -171652524 + L1MA8 LINE L1 6213 6242 -49 1206 211 30 112 chr2 81604059 81604557 -171652026 - MSTB2 LTR MaLR 0 457 1 300 150 0 75 chr2 81604557 81604599 -171651984 + L1MA8 LINE L1 6242 6286 -5 831 195 6 0 chr2 81604612 81604786 -171651797 + L1MA7 LINE L1 5937 6111 -180 1475 178 108 6 chr2 81604786 81605172 -171651411 + Tigger2 DNA MER2_type 1 2718 0 648 179 50 34 chr2 81605172 81605214 -171651369 + L1MA7 LINE L1 6110 6150 -141 192 40 0 0 chr2 81605214 81605239 -171651344 + (CA)n Simple_repeat Simple_repeat 1 25 0 648 179 50 34 chr2 81605239 81605375 -171651208 + L1MA7 LINE L1 6150 6291 0 192 40 0 0 chr2 81605696 81605721 -171650862 + (CA)n Simple_repeat Simple_repeat 2 26 0 * 402 39 0 0 chr2 81605720 81605772 -171650811 + (GA)n Simple_repeat Simple_repeat 2 53 0 472 323 38 17 chr2 81605781 81606069 -171650514 + HAL1b LINE L1 279 572 -776 928 221 50 11 chr2 81606552 81607109 -171649474 - L1M4 LINE L1 -1202 4944 4306 33 56 0 0 chr2 81607279 81607333 -171649250 + AT_rich Low_complexity Low_complexity 1 54 0 354 263 57 11 chr2 81607393 81607537 -171649046 - L1MCa LINE L1 -4509 1917 1710 25 0 0 0 chr2 81607619 81607644 -171648939 + AT_rich Low_complexity Low_complexity 1 25 0 562 213 9 0 chr2 81607647 81607755 -171648828 - FLAM_A SINE Alu -22 120 12 13006 168 51 20 chr2 81607942 81608145 -171648438 + Tigger4(Zombi) DNA MER2_type 2 197 -2534 2365 125 8 13 chr2 81608145 81608522 -171648061 - THE1C LTR MaLR 0 375 1 13006 168 51 20 chr2 81608522 81610422 -171646161 + Tigger4(Zombi) DNA MER2_type 197 2198 -533 1727 134 0 11 chr2 81610422 81610683 -171645900 - AluSx SINE Alu -20 292 35 13006 168 51 20 chr2 81610683 81611090 -171645493 + Tigger4(Zombi) DNA MER2_type 2198 2591 -140 380 312 58 40 chr2 81611942 81612115 -171644468 + MIR SINE MIR 76 251 -11 955 151 12 6 chr2 81614389 81614555 -171642028 - L1PA15 LINE L1 -5 6160 5994 495 234 166 36 chr2 81614887 81615165 -171641418 - L1M4 LINE L1 -1717 4611 4298 1504 223 13 42 chr2 81615326 81615703 -171640880 + MLT1A2 LTR MaLR 1 366 -8 1595 198 53 17 chr2 81616009 81616368 -171640215 + MLT1B LTR MaLR 19 390 0 25 0 0 0 chr2 81616453 81616478 -171640105 + AT_rich Low_complexity Low_complexity 1 25 0 1044 279 35 32 chr2 81616961 81617330 -171639253 - MLT1A2 LTR MaLR -4 370 1 1038 108 0 0 chr2 81617604 81617743 -171638840 - L1PA7 LINE L1 -1976 4170 4032 8068 101 6 0 chr2 81617743 81619668 -171636915 + L1PA7 LINE L1 4197 6139 -15 260 286 11 11 chr2 81619775 81619866 -171636717 + LTR67 LTR ERVL 428 518 -39 6493 230 41 14 chr2 81620019 81623084 -171633499 - L1M4 LINE L1 -2404 3924 781 2526 235 72 38 chr2 81623129 81623794 -171632789 - L1M4 LINE L1 -4625 703 16 24 77 0 0 chr2 81624837 81624889 -171631694 + AT_rich Low_complexity Low_complexity 1 52 0 314 354 16 16 chr2 81624939 81625066 -171631517 - MIR SINE MIR -65 143 17 3189 90 4 13 chr2 81625882 81626336 -171630247 - L1PA11 LINE L1 -1 6173 5724 2093 148 39 3 chr2 81626336 81626913 -171629670 + L1P4 LINE L1 4966 5560 -608 278 320 117 8 chr2 81627669 81627797 -171628786 - L2 LINE L2 -13 3300 3159 1089 237 34 80 chr2 81628045 81628233 -171628350 - MLT1D LTR MaLR -69 436 270 1331 164 43 11 chr2 81628233 81628469 -171628114 - L1MA4A LINE L1 -6 6297 6049 537 100 0 0 chr2 81628469 81628549 -171628034 - MADE1 DNA Mariner 0 80 1 1331 164 43 11 chr2 81628549 81628593 -171627990 - L1MA4A LINE L1 -254 6049 6008 1089 237 34 80 chr2 81628593 81628754 -171627829 - MLT1D LTR MaLR -235 270 103 201 275 38 25 chr2 81629083 81629163 -171627420 + L2 LINE L2 2575 2655 -659 22 0 0 0 chr2 81629193 81629215 -171627368 + AT_rich Low_complexity Low_complexity 1 22 0 243 154 39 0 chr2 81629231 81629283 -171627300 - L1MB1 LINE L1 0 6168 6115 1785 64 4 8 chr2 81629306 81629542 -171627041 - AluSp SINE Alu -78 235 1 1254 217 14 34 chr2 81629542 81629892 -171626691 - L1MB1 LINE L1 -39 6129 5787 1313 115 39 19 chr2 81629892 81630100 -171626483 + MLT2B1 LTR ERVL 1 212 -308 648 307 0 0 chr2 81630682 81630871 -171625712 + MER5A DNA MER1_type 1 189 0 21 36 0 0 chr2 81630939 81630967 -171625616 + AT_rich Low_complexity Low_complexity 1 28 0 2001 112 14 10 chr2 81630969 81631265 -171625318 - AluSq SINE Alu -16 297 1 379 385 83 25 chr2 81631429 81631930 -171624653 - L2 LINE L2 -256 3057 2531 244 181 0 56 chr2 81632366 81632438 -171624145 + T-rich Low_complexity Low_complexity 5 72 0 568 148 69 0 chr2 81632473 81632574 -171624009 - THE1C LTR MaLR -263 112 5 6965 140 32 1 chr2 81632578 81633938 -171622645 - THE1B-int LTR MaLR 0 1580 146 1666 150 42 7 chr2 81633963 81634250 -171622333 - THE1B LTR MaLR -1 363 67 277 258 0 78 chr2 81634369 81634497 -171622086 - L1MEc LINE L1 -2701 3725 3608 1155 203 12 17 chr2 81634534 81634775 -171621808 - MLT1D LTR MaLR -260 245 6 897 314 65 20 chr2 81634829 81635485 -171621098 - L1MEc LINE L1 -4086 2521 1836 581 264 48 10 chr2 81635492 81635700 -171620883 - L1MEc LINE L1 -5026 1400 1185 423 0 0 0 chr2 81635701 81635748 -171620835 + (TG)n Simple_repeat Simple_repeat 2 48 0 583 308 25 13 chr2 81635750 81635987 -171620596 - L1MEc LINE L1 -5277 1149 910 434 330 170 20 chr2 81636686 81637192 -171619391 - L2 LINE L2 -1555 1759 1178 333 0 0 0 chr2 81637408 81637445 -171619138 + (TG)n Simple_repeat Simple_repeat 2 38 0 336 318 75 23 chr2 81637943 81638248 -171618335 + HAL1b LINE L1 334 654 -694 21 71 0 0 chr2 81638703 81638745 -171617838 + AT_rich Low_complexity Low_complexity 1 42 0 210 343 37 46 chr2 81638922 81639030 -171617553 - L2 LINE L2 -229 3043 2937 375 315 5 60 chr2 81639821 81640005 -171616578 - MER5B DNA MER1_type -3 175 2 679 288 22 69 chr2 81641335 81641655 -171614928 + LTR40a LTR ERVL 4 308 -211 1308 193 4 8 chr2 81642159 81642403 -171614180 - AluJb SINE Alu -6 306 64 3275 105 48 4 chr2 81642509 81643046 -171613537 - L1P4 LINE L1 -383 5785 5226 492 222 12 64 chr2 81643039 81643210 -171613373 + L1MA9 LINE L1 6121 6282 -30 * 272 261 43 58 chr2 81643615 81643803 -171612780 + L1ME LINE L1 46 230 -6166 1069 234 75 73 chr2 81643882 81644363 -171612220 + L1ME LINE L1 4735 5212 -1023 2163 113 0 6 chr2 81644363 81644674 -171611909 + AluSc SINE Alu 1 309 0 1069 234 75 73 chr2 81644674 81645134 -171611449 + L1ME LINE L1 5212 5669 -566 530 230 11 47 chr2 81645153 81645360 -171611223 - L1MEc LINE L1 -3738 2483 2300 893 282 92 49 chr2 81645391 81646085 -171610498 - L1MEc LINE L1 -5634 762 39 2296 53 0 11 chr2 81646782 81647122 -171609461 + AluY SINE Alu 1 337 0 477 206 15 69 chr2 81647139 81647270 -171609313 - MLT1C LTR MaLR -299 168 45 28 71 0 0 chr2 81648891 81648947 -171607636 + AT_rich Low_complexity Low_complexity 1 56 0 5920 136 21 3 chr2 81649101 81650312 -171606271 - L1PA15 LINE L1 -21 6144 4921 282 333 63 35 chr2 81650575 81650749 -171605834 + MIR SINE MIR 66 244 -18 252 0 0 0 chr2 81651171 81651199 -171605384 + (TG)n Simple_repeat Simple_repeat 1 28 0 537 58 0 0 chr2 81651963 81652032 -171604551 + (TCTA)n Simple_repeat Simple_repeat 2 70 0 1991 128 7 0 chr2 81652410 81652700 -171603883 - AluSx SINE Alu -20 292 1 327 349 86 12 chr2 81652950 81653288 -171603295 + L1MCc LINE L1 25 387 -6036 629 282 133 48 chr2 81653653 81654128 -171602455 + L1MCc LINE L1 892 1406 -5017 5096 127 19 9 chr2 81654239 81655144 -171601439 - L1P LINE L1 -1049 5097 4184 1381 94 0 0 chr2 81655144 81655335 -171601248 - L1PA5 LINE L1 0 6154 5964 3009 99 25 0 chr2 81655335 81655769 -171600814 - LTR19B LTR ERV1 -135 445 1 244 295 78 26 chr2 81655989 81656182 -171600401 - L1ME LINE L1 -289 5881 5679 1185 209 36 22 chr2 81657143 81657420 -171599163 - L1MA9 LINE L1 -438 5874 5594 2310 105 25 49 chr2 81657423 81657831 -171598752 - L1PA10 LINE L1 0 6168 5771 7688 48 7 9 chr2 81657931 81659743 -171596840 + L1PA4 LINE L1 4366 6155 0 778 156 37 0 chr2 81659743 81659878 -171596705 + LTR19B LTR ERV1 441 580 0 1953 132 7 0 chr2 81660248 81660560 -171596023 + AluSx SINE Alu 1 314 0 22 0 0 0 chr2 81660628 81660650 -171595933 + AT_rich Low_complexity Low_complexity 1 22 0 29 47 0 0 chr2 81661196 81661239 -171595344 + AT_rich Low_complexity Low_complexity 1 43 0 32 26 0 0 chr2 81661382 81661421 -171595162 + AT_rich Low_complexity Low_complexity 1 39 0 33 73 0 0 chr2 81661702 81661770 -171594813 + AT_rich Low_complexity Low_complexity 1 68 0 391 335 96 39 chr2 81662418 81662803 -171593780 + L2 LINE L2 762 1168 -2146 1248 157 66 72 chr2 81662837 81663142 -171593441 + AluJo SINE Alu 9 311 -1 266 96 0 19 chr2 81663143 81663195 -171593388 + (CAAG)n Simple_repeat Simple_repeat 2 52 0 510 360 93 0 chr2 81663512 81663801 -171592782 + L2 LINE L2 1256 1571 -1743 1916 156 52 6 chr2 81663801 81664148 -171592435 + THE1B LTR MaLR 1 363 -1 7168 138 27 1 chr2 81664173 81665540 -171591043 + THE1B-int LTR MaLR 146 1580 0 2184 146 25 3 chr2 81665540 81665896 -171590687 + THE1B LTR MaLR 1 364 0 379 346 77 4 chr2 81665899 81666159 -171590424 + L2 LINE L2 1570 1848 -1466 28 48 0 0 chr2 81666412 81666454 -171590129 + AT_rich Low_complexity Low_complexity 1 42 0 6919 173 45 7 chr2 81666547 81667781 -171588802 + ERVL LTR ERVL 4151 5431 -333 476 278 84 49 chr2 81669153 81669761 -171586822 + L1M4 LINE L1 4762 5390 -756 2248 188 46 9 chr2 81669973 81670475 -171586108 + LTR27 LTR ERV1 3 490 -11 180 0 0 0 chr2 81671118 81671138 -171585445 + (TTTAA)n Simple_repeat Simple_repeat 2 21 0 288 0 0 0 chr2 81671138 81671170 -171585413 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 2144 58 10 24 chr2 81671177 81671469 -171585114 - AluY SINE Alu -23 288 1 1876 147 3 10 chr2 81671472 81671771 -171584812 - AluSq SINE Alu -16 297 1 552 15 0 0 chr2 81671944 81672009 -171584574 + (TTA)n Simple_repeat Simple_repeat 2 66 0 2035 131 7 7 chr2 81672366 81672663 -171583920 + AluSx SINE Alu 1 297 -15 218 222 25 25 chr2 81672680 81672761 -171583822 + (TTAAA)n Simple_repeat Simple_repeat 3 83 0 233 213 0 0 chr2 81673541 81673588 -171582995 + GA-rich Low_complexity Low_complexity 2 48 0 608 222 0 0 chr2 81674211 81674337 -171582246 - L1PB4 LINE L1 -7 6149 6024 4165 212 16 4 chr2 81674337 81675290 -171581293 - L1 LINE L1 -886 5260 4297 549 150 0 0 chr2 81676092 81676192 -171580391 + (CCTA)n Simple_repeat Simple_repeat 1 100 0 334 200 354 0 chr2 81676275 81676405 -171580178 - MER5B DNA MER1_type -2 176 1 316 268 21 21 chr2 81677272 81677369 -171579214 + MIR SINE MIR 65 161 -101 22 0 0 0 chr2 81677996 81678018 -171578565 + AT_rich Low_complexity Low_complexity 1 22 0 249 322 159 13 chr2 81678244 81678471 -171578112 - MIR SINE MIR 0 262 3 186 71 0 0 chr2 81678769 81678797 -171577786 + (GA)n Simple_repeat Simple_repeat 2 29 0 189 125 0 0 chr2 81678797 81678829 -171577754 + L2 LINE L2 3277 3308 -5 2036 191 45 27 chr2 81679854 81680303 -171576280 + MSTB2 LTR MaLR 1 457 0 37 39 0 0 chr2 81680662 81680713 -171575870 + AT_rich Low_complexity Low_complexity 1 51 0 253 257 10 50 chr2 81681028 81681129 -171575454 - L1M3 LINE L1 -410 5773 5677 234 239 14 42 chr2 81681108 81681179 -171575404 + L1MC4 LINE L1 6634 6702 -1340 * 1460 239 57 71 chr2 81681197 81681578 -171575005 - L1ME1 LINE L1 -77 6089 5717 1597 191 3 20 chr2 81681578 81681877 -171574706 - AluJb SINE Alu -18 294 1 1460 239 57 71 chr2 81681877 81682042 -171574541 - L1ME1 LINE L1 -449 5717 5551 792 279 12 0 chr2 81682039 81682279 -171574304 - L1MEc LINE L1 -5439 957 715 * 438 20 0 0 chr2 81683031 81683082 -171573501 + (CA)n Simple_repeat Simple_repeat 2 52 0 22 56 0 0 chr2 81683224 81683260 -171573323 + AT_rich Low_complexity Low_complexity 1 36 0 1083 43 0 14 chr2 81683281 81683421 -171573162 - L1PA5 LINE L1 0 6154 6017 487 251 118 35 chr2 81683439 81683694 -171572889 - L1 LINE L1 -2915 3231 2956 335 291 62 57 chr2 81685052 81685296 -171571287 - L1MC/D LINE L1 -1996 5812 5568 713 245 6 0 chr2 81686039 81686198 -171570385 + FRAM SINE Alu 1 160 -16 2004 100 7 24 chr2 81686223 81686513 -171570070 - AluSg SINE Alu -13 297 13 3474 110 31 6 chr2 81686723 81687540 -171569043 - L1PA7 LINE L1 -289 5865 5037 564 277 94 80 chr2 81687621 81688047 -171568536 - L1MC/D LINE L1 -2005 5803 5372 259 307 20 0 chr2 81688340 81688441 -171568142 - L1MC4 LINE L1 -3 8039 7937 291 263 0 22 chr2 81688448 81688639 -171567944 + (TA)n Simple_repeat Simple_repeat 1 186 0 429 325 127 9 chr2 81688757 81689089 -171567494 - L1MC4 LINE L1 -271 7771 7401 411 21 0 0 chr2 81689143 81689191 -171567392 + (TTCTC)n Simple_repeat Simple_repeat 4 51 0 284 81 0 0 chr2 81689194 81689231 -171567352 - AluSp/q SINE Alu -22 281 245 210 296 15 37 chr2 81689242 81689377 -171567206 + CT-rich Low_complexity Low_complexity 3 134 0 602 209 172 0 chr2 81689720 81689883 -171566700 + MLT2B2 LTR ERVL 324 514 -1 2140 199 17 54 chr2 81689888 81690560 -171566023 - L1M3 LINE L1 -375 5793 5146 639 187 8 22 chr2 81690552 81690686 -171565897 + L1 LINE L1 4471 4602 -1544 * 1087 154 121 39 chr2 81690829 81691109 -171565474 + L1MA9 LINE L1 5993 6295 -17 275 164 0 30 chr2 81691098 81691165 -171565418 + L1 LINE L1 4599 4663 -1483 * 1793 193 40 0 chr2 81691159 81691512 -171565071 + L1MC1 LINE L1 5486 5852 -481 1301 224 10 21 chr2 81691512 81691802 -171564781 + AluJo SINE Alu 1 287 -25 1501 119 0 9 chr2 81691830 81692048 -171564535 + AluSx SINE Alu 1 216 -96 1731 230 15 31 chr2 81692074 81692530 -171564053 + L1 LINE L1 4676 5124 -1022 254 340 100 47 chr2 81692541 81692893 -171563690 + L2 LINE L2 2687 3054 -259 21 0 0 0 chr2 81693327 81693348 -171563235 + AT_rich Low_complexity Low_complexity 1 21 0 402 211 26 0 chr2 81693731 81693807 -171562776 - MER45 DNA AcHobo 0 1581 1504 820 222 159 29 chr2 81693827 81694113 -171562470 - AluJo SINE Alu 0 329 13 763 290 6 0 chr2 81694314 81694483 -171562100 - MER45C DNA AcHobo -687 266 97 1949 123 11 3 chr2 81694488 81694772 -171561811 + AluSx SINE Alu 1 286 -26 281 174 14 0 chr2 81694772 81694841 -171561742 + (TA)n Simple_repeat Simple_repeat 1 70 0 2261 57 4 7 chr2 81694890 81695170 -171561413 - AluY SINE Alu -15 296 18 21 36 0 0 chr2 81695278 81695306 -171561277 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr2 81696882 81696911 -171559672 + AT_rich Low_complexity Low_complexity 1 29 0 365 314 83 50 chr2 81696943 81696974 -171559609 + LTR33 LTR ERVL 3 32 -489 189 0 0 0 chr2 81696974 81696995 -171559588 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 365 314 83 50 chr2 81696995 81697205 -171559378 + LTR33 LTR ERVL 32 252 -269 573 213 0 104 chr2 81697222 81697386 -171559197 + MIR SINE MIR 3 149 -113 326 250 11 22 chr2 81697388 81697480 -171559103 + L1ME1 LINE L1 811 901 -5495 248 235 122 10 chr2 81697867 81697965 -171558618 + MLT1E2 LTR MaLR 95 203 -451 25 0 0 0 chr2 81698010 81698035 -171558548 + AT_rich Low_complexity Low_complexity 1 25 0 1349 267 41 39 chr2 81698090 81698506 -171558077 + MLT1E2 LTR MaLR 153 569 -57 1694 248 62 10 chr2 81698529 81699142 -171557441 + L1ME1 LINE L1 2386 3030 -3185 6206 93 25 0 chr2 81699144 81700235 -171556348 + L1PA8 LINE L1 5046 6159 -13 2089 230 62 63 chr2 81700239 81700736 -171555847 + L1ME1 LINE L1 4764 5260 -975 2011 106 4 4 chr2 81700736 81701009 -171555574 + AluSc SINE Alu 1 273 -36 2089 230 62 63 chr2 81701009 81701629 -171554954 + L1ME1 LINE L1 5260 5877 -358 584 299 22 44 chr2 81701633 81701758 -171554825 + L1ME1 LINE L1 5923 6049 -186 2985 77 39 32 chr2 81701758 81701796 -171554787 - MLT2A1 LTR ERVL 0 444 408 459 0 0 0 chr2 81701796 81701847 -171554736 + (TA)n Simple_repeat Simple_repeat 1 51 0 2985 77 39 32 chr2 81701847 81702249 -171554334 - MLT2A1 LTR ERVL -36 408 1 584 299 22 44 chr2 81702249 81702441 -171554142 + L1ME1 LINE L1 6049 6233 -2 1218 209 6 78 chr2 81703244 81703565 -171553018 - AluJb SINE Alu -4 298 1 24 0 0 0 chr2 81703907 81703931 -171552652 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr2 81704053 81704081 -171552502 + AT_rich Low_complexity Low_complexity 1 28 0 7383 31 6 0 chr2 81704967 81706348 -171550235 - L1PA4 LINE L1 -3 6152 4767 405 41 0 0 chr2 81706348 81706397 -171550186 + L1PA4 LINE L1 4725 4773 -1373 23 78 0 0 chr2 81708329 81708380 -171548203 + AT_rich Low_complexity Low_complexity 1 51 0 1350 228 146 29 chr2 81708409 81708787 -171547796 - MLT2B1 LTR ERVL -64 456 35 21 0 0 0 chr2 81709436 81709457 -171547126 + AT_rich Low_complexity Low_complexity 1 21 0 24 100 0 0 chr2 81709511 81709591 -171546992 + AT_rich Low_complexity Low_complexity 1 80 0 23 54 0 0 chr2 81710379 81710416 -171546167 + AT_rich Low_complexity Low_complexity 1 37 0 333 310 40 46 chr2 81710886 81711223 -171545360 + HAL1 LINE L1 1364 1986 -833 27 0 0 0 chr2 81711334 81711361 -171545222 + AT_rich Low_complexity Low_complexity 1 27 0 2071 99 11 0 chr2 81711856 81712139 -171544444 - AluSp SINE Alu -5 308 23 811 311 65 13 chr2 81712203 81712512 -171544071 - MLT1E3 LTR MaLR -8 616 292 218 54 0 27 chr2 81712534 81712571 -171544012 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 32 75 0 0 chr2 81712628 81712695 -171543888 + AT_rich Low_complexity Low_complexity 1 67 0 1008 61 8 8 chr2 81712698 81712829 -171543754 - AluSc SINE Alu -23 286 156 411 323 77 46 chr2 81712902 81713333 -171543250 + L1M4 LINE L1 2428 2871 -3275 23 54 0 0 chr2 81713432 81713469 -171543114 + AT_rich Low_complexity Low_complexity 1 37 0 2942 212 99 55 chr2 81714244 81714795 -171541788 - L1MC3 LINE L1 -12 7773 7248 326 250 60 0 chr2 81714795 81714879 -171541704 - MLT1F1 LTR MaLR -444 123 35 2942 212 99 55 chr2 81714879 81716395 -171540188 - L1MC3 LINE L1 -537 7248 5340 * 6804 210 31 32 chr2 81716385 81718227 -171538356 + L1M2 LINE L1 2829 4668 -1478 1183 174 0 28 chr2 81718264 81718482 -171538101 + L1M2 LINE L1 5490 5701 -611 579 333 50 14 chr2 81718522 81718819 -171537764 - L1MC4a LINE L1 -1025 6783 6476 22 80 0 0 chr2 81718923 81718973 -171537610 + AT_rich Low_complexity Low_complexity 1 50 0 22 0 0 0 chr2 81719921 81719943 -171536640 + AT_rich Low_complexity Low_complexity 1 22 0 24 53 0 0 chr2 81720758 81720796 -171535787 + AT_rich Low_complexity Low_complexity 1 38 0 4979 153 12 6 chr2 81721737 81723559 -171533024 - L1PA16 LINE L1 -9 6157 4316 792 309 140 42 chr2 81723631 81723755 -171532828 - HAL1 LINE L1 -1098 1409 1299 180 0 0 0 chr2 81723755 81723775 -171532808 + (TCTCC)n Simple_repeat Simple_repeat 4 23 0 792 309 140 42 chr2 81723775 81724079 -171532504 - HAL1 LINE L1 -1208 1299 1026 2267 99 3 0 chr2 81724079 81724373 -171532210 + AluSg SINE Alu 1 295 -15 792 309 140 42 chr2 81724373 81725097 -171531486 - HAL1 LINE L1 -1481 1026 142 195 329 87 25 chr2 81725284 81725445 -171531138 - MIR SINE MIR -5 257 87 1476 210 27 3 chr2 81725480 81725775 -171530808 - AluJb SINE Alu 0 312 11 207 0 0 0 chr2 81726437 81726460 -171530123 + (TTTTTG)n Simple_repeat Simple_repeat 3 25 0 30 77 0 0 chr2 81726851 81726916 -171529667 + AT_rich Low_complexity Low_complexity 1 65 0 26 0 0 0 chr2 81727401 81727427 -171529156 + AT_rich Low_complexity Low_complexity 1 26 0 1439 239 0 17 chr2 81727645 81727942 -171528641 - AluJo SINE Alu -8 294 3 184 359 15 8 chr2 81728758 81728889 -171527694 - L2 LINE L2 -1661 1653 1522 23 0 0 0 chr2 81729621 81729644 -171526939 + AT_rich Low_complexity Low_complexity 1 23 0 1591 149 4 36 chr2 81729938 81730219 -171526364 - AluJo SINE Alu -6 306 35 189 307 124 64 chr2 81730997 81731401 -171525182 + L2 LINE L2 781 1208 -2106 1167 168 19 5 chr2 81731891 81732099 -171524484 - MER47A DNA MER2_type -154 212 2 316 310 95 39 chr2 81732278 81732510 -171524073 + HAL1 LINE L1 1234 1478 -1029 231 266 128 0 chr2 81732593 81732702 -171523881 + L1MEc LINE L1 1564 1686 -4710 234 0 0 0 chr2 81733606 81733632 -171522951 + (TG)n Simple_repeat Simple_repeat 2 27 0 210 313 119 57 chr2 81733941 81734117 -171522466 + MIR SINE MIR 6 192 -70 697 207 18 143 chr2 81734935 81735215 -171521368 - MLT1A1 LTR MaLR -120 245 1 374 326 43 11 chr2 81735268 81735452 -171521131 + MLT1J LTR MaLR 12 201 -310 21 0 0 0 chr2 81735880 81735901 -171520682 + AT_rich Low_complexity Low_complexity 1 21 0 199 273 18 0 chr2 81736187 81736242 -171520341 + MER5A DNA MER1_type 124 179 -10 314 322 34 0 chr2 81736531 81736680 -171519903 - HAL1 LINE L1 -782 1725 1572 218 259 0 19 chr2 81736761 81736815 -171519768 + CT-rich Low_complexity Low_complexity 1 53 0 313 161 31 31 chr2 81736881 81737043 -171519540 + (TA)n Simple_repeat Simple_repeat 2 163 0 753 327 107 36 chr2 81737044 81737653 -171518930 - HAL1 LINE L1 -1091 1416 765 1864 122 7 34 chr2 81737696 81738026 -171518557 - AluSx SINE Alu 0 322 1 1740 124 43 0 chr2 81738650 81738908 -171517675 + AluSx SINE Alu 25 293 -19 257 224 41 34 chr2 81742485 81742632 -171513951 + (TA)n Simple_repeat Simple_repeat 2 149 0 186 279 162 0 chr2 81743018 81743086 -171513497 + MIR SINE MIR 66 144 -118 283 340 6 0 chr2 81743674 81743697 -171512886 - L1MA10 LINE L1 0 6334 6312 2733 271 31 38 chr2 81743697 81745074 -171511509 - L1ME1 LINE L1 -14 6221 4843 632 311 97 28 chr2 81745165 81745998 -171510585 - L1ME1 LINE L1 -4537 1859 969 1699 223 3 3 chr2 81745998 81746339 -171510244 - MLT2C1 LTR ERVL -56 341 1 260 316 59 43 chr2 81746349 81746536 -171510047 - L1ME1 LINE L1 -6123 273 84 424 246 0 67 chr2 81748579 81748713 -171507870 + FLAM_C SINE Alu 1 125 -8 25 51 0 0 chr2 81749014 81749053 -171507530 + AT_rich Low_complexity Low_complexity 1 39 0 1502 183 3 31 chr2 81749264 81749592 -171506991 - AluJo SINE Alu 0 320 1 403 281 82 36 chr2 81750621 81750838 -171505745 + HAL1 LINE L1 1233 1467 -1040 261 0 0 0 chr2 81750838 81750867 -171505716 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 403 281 82 36 chr2 81750867 81750930 -171505653 + HAL1 LINE L1 1467 1526 -981 2126 74 0 37 chr2 81751012 81751344 -171505239 + AluY SINE Alu 1 321 0 2319 87 3 0 chr2 81752219 81752530 -171504053 + AluSx SINE Alu 1 312 0 26 0 0 0 chr2 81754014 81754040 -171502543 + AT_rich Low_complexity Low_complexity 1 26 0 687 247 67 74 chr2 81754073 81754392 -171502191 - L1ME LINE L1 -572 5597 5284 2137 128 0 0 chr2 81754392 81754697 -171501886 - AluSq SINE Alu -8 305 1 687 247 67 74 chr2 81754697 81754926 -171501657 - L1ME LINE L1 -885 5284 5055 462 241 41 21 chr2 81756931 81757076 -171499507 + L1MC4a LINE L1 7084 7231 -577 2148 113 3 3 chr2 81757086 81757386 -171499197 + AluSx SINE Alu 1 300 -12 272 293 20 10 chr2 81757516 81757615 -171498968 + MIR3 SINE MIR 56 155 -53 465 234 241 0 chr2 81757626 81757767 -171498816 + MER5A DNA MER1_type 9 183 -6 950 130 0 0 chr2 81757788 81757919 -171498664 + FLAM_C SINE Alu 2 132 -11 453 248 14 35 chr2 81757976 81758117 -171498466 + MIR SINE MIR 123 260 -2 1734 149 76 0 chr2 81758540 81758815 -171497768 + AluSg SINE Alu 1 296 -14 2639 200 39 37 chr2 81759750 81760918 -171495665 - L1MCb LINE L1 -4526 2038 768 827 197 52 28 chr2 81761022 81761235 -171495348 + L1MC2 LINE L1 6125 6342 -2 1167 285 110 34 chr2 81761561 81762123 -171494460 - L2 LINE L2 -714 2600 1996 319 313 55 40 chr2 81762980 81763181 -171493402 + MIR SINE MIR 32 235 -27 1192 266 90 64 chr2 81763385 81763584 -171492999 + L1M4 LINE L1 3669 3861 -2285 246 32 0 0 chr2 81763584 81763615 -171492968 + (CAA)n Simple_repeat Simple_repeat 2 32 0 1192 266 90 64 chr2 81763615 81764262 -171492321 + L1M4 LINE L1 3861 4537 -1609 1032 124 0 0 chr2 81764263 81764416 -171492167 - AluSg/x SINE Alu -17 295 143 548 162 79 8 chr2 81764417 81764647 -171491936 + L1PA10 LINE L1 5764 6014 -158 1849 92 20 48 chr2 81765384 81765702 -171490881 - AluY SINE Alu 0 310 1 2173 104 0 30 chr2 81765704 81766002 -171490581 - AluSx SINE Alu -17 295 7 1923 168 0 0 chr2 81766007 81766311 -171490272 - AluJb SINE Alu -8 304 1 3585 56 0 0 chr2 81766444 81766891 -171489692 + L1PA7 LINE L1 5699 6145 -9 1991 126 3 3 chr2 81767227 81767528 -171489055 + AluSx SINE Alu 1 301 -11 1955 85 8 4 chr2 81767600 81767860 -171488723 + AluSp SINE Alu 39 299 -14 320 51 64 26 chr2 81769069 81769147 -171487436 + (TA)n Simple_repeat Simple_repeat 1 81 0 2559 119 29 11 chr2 81769147 81769592 -171486991 - L1MA3 LINE L1 -15 6290 5838 288 314 10 20 chr2 81769600 81769702 -171486881 - MER5A DNA MER1_type -88 101 1 234 0 0 0 chr2 81771186 81771212 -171485371 + (A)n Simple_repeat Simple_repeat 1 26 0 1368 68 42 5 chr2 81771703 81771893 -171484690 + AluSg/x SINE Alu 107 303 -9 225 182 13 39 chr2 81772118 81772195 -171484388 + (TATATG)n Simple_repeat Simple_repeat 2 76 0 244 206 27 14 chr2 81772217 81772290 -171484293 - L1M4 LINE L1 -1104 5042 4969 300 305 84 18 chr2 81772404 81772630 -171483953 - L1M4 LINE L1 -1481 4665 4425 456 314 76 19 chr2 81772740 81773004 -171483579 - L1M4 LINE L1 -1869 4277 3999 * 12854 206 40 19 chr2 81773001 81774931 -171481652 - L1MA4 LINE L1 -2 6480 4592 189 0 0 0 chr2 81774931 81774952 -171481631 + (TG)n Simple_repeat Simple_repeat 2 22 0 12854 206 40 19 chr2 81774952 81777773 -171478810 - L1MA4 LINE L1 -1890 4592 1628 1082 108 6 0 chr2 81777773 81777940 -171478643 - L1P LINE L1 -861 5285 5118 327 289 0 0 chr2 81777963 81778053 -171478530 - L1MA4 LINE L1 -4707 1621 1532 5758 109 52 0 chr2 81778089 81779029 -171477554 - L1PA10 LINE L1 -10 6158 5203 6570 161 28 15 chr2 81779031 81780262 -171476321 - L1PA10 LINE L1 -2811 3335 2088 1893 218 29 38 chr2 81780244 81781060 -171475523 - L1MA4 LINE L1 -4065 1263 714 * 22 35 0 0 chr2 81781082 81781111 -171475472 + AT_rich Low_complexity Low_complexity 1 29 0 14537 185 108 38 chr2 81781294 81782812 -171473771 + L1PB1 LINE L1 156 1567 -5300 1580 189 4 7 chr2 81782812 81783093 -171473490 + AluJo SINE Alu 1 280 -32 266 0 29 0 chr2 81783099 81783133 -171473450 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 14537 185 108 38 chr2 81783133 81785521 -171471062 + L1PB1 LINE L1 1571 3792 -3075 1224 106 5 92 chr2 81785521 81785738 -171470845 + AluSc SINE Alu 1 198 -111 14537 185 108 38 chr2 81785738 81786126 -171470457 + L1PB1 LINE L1 3792 4152 -2715 216 0 0 0 chr2 81786126 81786150 -171470433 + (TAAAA)n Simple_repeat Simple_repeat 4 27 0 14537 185 108 38 chr2 81786150 81787816 -171468767 + L1PB1 LINE L1 4152 6822 -45 319 171 81 54 chr2 81787817 81787928 -171468655 - MER6 DNA MER2_type -137 728 615 25 0 0 0 chr2 81788315 81788340 -171468243 + AT_rich Low_complexity Low_complexity 1 25 0 26 0 0 0 chr2 81788858 81788884 -171467699 + AT_rich Low_complexity Low_complexity 1 26 0 738 392 28 34 chr2 81789259 81789871 -171466712 + MER115 DNA AcHobo 78 685 -8 24 0 0 0 chr2 81790073 81790097 -171466486 + AT_rich Low_complexity Low_complexity 1 24 0 329 336 52 20 chr2 81790471 81790721 -171465862 - HAL1 LINE L1 -892 1615 1358 24 0 0 0 chr2 81790945 81790969 -171465614 + AT_rich Low_complexity Low_complexity 1 24 0 3015 138 16 6 chr2 81791621 81792130 -171464453 - L1MA5A LINE L1 -36 6261 5748 5115 249 41 41 chr2 81792138 81794121 -171462462 - L1M2c LINE L1 -4971 1818 3 580 323 86 47 chr2 81794797 81795438 -171461145 - L1M4 LINE L1 -964 5182 4517 660 317 63 34 chr2 81796139 81796518 -171460065 + L2 LINE L2 2924 3313 0 24 32 0 0 chr2 81796518 81796549 -171460034 + AT_rich Low_complexity Low_complexity 1 31 0 28 29 0 0 chr2 81798069 81798104 -171458479 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr2 81798225 81798248 -171458335 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 81798986 81799014 -171457569 + AT_rich Low_complexity Low_complexity 1 28 0 3273 200 9 3 chr2 81799206 81799847 -171456736 + L1PA16 LINE L1 5506 6150 -16 29 0 0 0 chr2 81799930 81799959 -171456624 + AT_rich Low_complexity Low_complexity 1 29 0 339 228 0 11 chr2 81800106 81800198 -171456385 - L1MA5A LINE L1 -2 6295 6205 22 0 0 0 chr2 81800300 81800322 -171456261 + AT_rich Low_complexity Low_complexity 1 22 0 383 163 0 93 chr2 81800536 81800622 -171455961 + MER2 DNA MER2_type 1 78 -267 1249 120 110 10 chr2 81800802 81801011 -171455572 - MER30 DNA MER1_type 0 230 1 491 68 54 0 chr2 81801762 81801836 -171454747 - MADE1 DNA Mariner -2 78 1 2419 219 60 2 chr2 81801878 81802408 -171454175 - MER68 LTR ERV1 0 562 2 538 297 78 23 chr2 81802530 81802749 -171453834 - MIR SINE MIR -21 241 11 256 330 17 8 chr2 81803003 81803121 -171453462 + MLT1L LTR MaLR 497 615 0 405 369 88 29 chr2 81803196 81803605 -171452978 - L2 LINE L2 -339 2975 2543 1141 167 6 176 chr2 81803639 81803986 -171452597 - AluJo SINE Alu -13 289 2 303 215 118 21 chr2 81804056 81804149 -171452434 - L1M4 LINE L1 -825 5321 5220 227 246 0 53 chr2 81804325 81804382 -171452201 - L1M4 LINE L1 -2323 3823 3770 * 2211 220 87 56 chr2 81804373 81804912 -171451671 + L1MC3 LINE L1 6283 6849 -936 282 29 0 0 chr2 81804912 81804947 -171451636 + (CA)n Simple_repeat Simple_repeat 2 36 0 2211 220 87 56 chr2 81804947 81805083 -171451500 + L1MC3 LINE L1 6849 6979 -806 1119 230 25 83 chr2 81805083 81805302 -171451281 - MLT1A2 LTR MaLR 0 374 187 561 79 0 0 chr2 81805302 81805378 -171451205 + MADE1 DNA Mariner 4 79 -1 1119 230 25 83 chr2 81805378 81805553 -171451030 - MLT1A2 LTR MaLR -187 187 3 1998 222 34 0 chr2 81805564 81805979 -171450604 - MLT1A2-int LTR MaLR -7 1728 1300 445 132 26 0 chr2 81805974 81806050 -171450533 - MLT1A2-int LTR MaLR -1633 102 25 * 1023 233 30 19 chr2 81806055 81806325 -171450258 + L1MC3 LINE L1 6978 7250 -535 203 133 0 0 chr2 81806612 81806642 -171449941 + (TG)n Simple_repeat Simple_repeat 1 30 0 26 30 0 0 chr2 81806787 81806820 -171449763 + AT_rich Low_complexity Low_complexity 1 33 0 1418 207 36 3 chr2 81807057 81807361 -171449222 - L1MB1 LINE L1 -13 6155 5842 306 152 0 0 chr2 81807372 81807418 -171449165 + MLT1A1 LTR MaLR 1 46 -328 5599 16 0 0 chr2 81807428 81808066 -171448517 + L1PA3 LINE L1 5517 6154 -1 236 204 0 0 chr2 81808077 81808126 -171448457 + A-rich Low_complexity Low_complexity 1 49 0 1253 213 48 8 chr2 81808393 81808642 -171447941 + MLT1A1 LTR MaLR 107 365 0 320 153 57 0 chr2 81808642 81808727 -171447856 - L1MB1 LINE L1 -333 5835 5746 408 316 97 44 chr2 81808920 81809344 -171447239 + L2 LINE L2 2660 3106 -207 1816 247 47 21 chr2 81809362 81809831 -171446752 - MLT1D LTR MaLR -22 483 3 422 354 7 0 chr2 81809834 81809978 -171446605 + L2 LINE L2 3144 3288 -25 2875 23 0 12 chr2 81810513 81810859 -171445724 - L1PA4 LINE L1 0 6155 5814 807 204 17 0 chr2 81811882 81812054 -171444529 + L1MA9 LINE L1 3606 3780 -2366 1349 140 65 0 chr2 81812056 81812285 -171444298 - MER4A LTR ERV1 0 664 421 2326 215 47 10 chr2 81812287 81813686 -171442897 + L1MA9 LINE L1 4853 6311 -1 282 247 37 0 chr2 81813907 81813988 -171442595 + GA-rich Low_complexity Low_complexity 1 84 0 474 219 167 0 chr2 81814049 81814163 -171442420 + FLAM_A SINE Alu 1 133 0 1606 98 4 45 chr2 81814343 81814588 -171441995 + MER52C LTR ERV1 1044 1278 0 21 36 0 0 chr2 81815702 81815730 -171440853 + AT_rich Low_complexity Low_complexity 1 28 0 1478 257 49 94 chr2 81816201 81816816 -171439767 + MLT1E LTR MaLR 2 588 -5 288 111 0 0 chr2 81817202 81817247 -171439336 + (TG)n Simple_repeat Simple_repeat 2 46 0 28 0 0 0 chr2 81818171 81818199 -171438384 + AT_rich Low_complexity Low_complexity 1 28 0 830 152 0 0 chr2 81819129 81819280 -171437303 + L1MA7 LINE L1 6130 6280 -11 1417 215 7 10 chr2 81819491 81819789 -171436794 + AluJo SINE Alu 6 302 -10 220 216 0 0 chr2 81819794 81819845 -171436738 + (TA)n Simple_repeat Simple_repeat 1 51 0 2117 252 89 22 chr2 81820035 81821458 -171435125 + L1MEc LINE L1 1699 3156 -3059 240 321 28 9 chr2 81821458 81821564 -171435019 + MLT1C LTR MaLR 146 253 -214 734 289 10 10 chr2 81821670 81821878 -171434705 + MLT1C LTR MaLR 260 467 0 1025 212 34 15 chr2 81821881 81822145 -171434438 + L1MC3 LINE L1 7494 7762 -23 1963 133 74 0 chr2 81822272 81822611 -171433972 + THE1B LTR MaLR 1 364 0 244 145 16 16 chr2 81823315 81823377 -171433206 + (CATAT)n Simple_repeat Simple_repeat 2 63 0 21 0 0 0 chr2 81824392 81824413 -171432170 + AT_rich Low_complexity Low_complexity 1 21 0 4272 157 12 30 chr2 81825198 81826019 -171430564 + L1PB4 LINE L1 5338 6143 -13 1683 139 99 37 chr2 81826069 81826422 -171430161 + THE1C LTR MaLR 1 375 0 21 36 0 0 chr2 81826995 81827023 -171429560 + AT_rich Low_complexity Low_complexity 1 28 0 3158 214 35 10 chr2 81827043 81827735 -171428848 - L1MB2 LINE L1 -2 7129 6421 184 172 35 0 chr2 81827858 81827916 -171428667 + (CATATA)n Simple_repeat Simple_repeat 3 62 0 292 240 31 0 chr2 81828228 81828324 -171428259 + (TA)n Simple_repeat Simple_repeat 2 100 0 1461 177 64 6 chr2 81828400 81828745 -171427838 - L1MA6 LINE L1 0 6300 5936 4831 212 79 8 chr2 81828745 81829954 -171426629 - L1MB2 LINE L1 -1491 5615 4322 702 296 0 5 chr2 81829991 81830207 -171426376 + L1 LINE L1 2430 2644 -3502 * 1146 239 9 42 chr2 81830205 81830313 -171426270 - L1MB2 LINE L1 -4769 2337 2227 2148 108 0 13 chr2 81830313 81830619 -171425964 - AluY SINE Alu -9 302 1 1146 239 9 42 chr2 81830619 81830845 -171425738 - L1MB2 LINE L1 -4879 2227 2014 950 82 0 0 chr2 81830846 81830968 -171425615 - AluY SINE Alu -13 298 177 2776 283 56 26 chr2 81830968 81831214 -171425369 - L1MB2 LINE L1 -5080 2026 1789 219 36 0 0 chr2 81831214 81831242 -171425341 + (TG)n Simple_repeat Simple_repeat 1 28 0 2776 283 56 26 chr2 81831242 81832316 -171424267 - L1MB2 LINE L1 -5317 1789 20 51 58 0 0 chr2 81832487 81832573 -171424010 + AT_rich Low_complexity Low_complexity 1 86 0 402 283 143 52 chr2 81832695 81833465 -171423118 + L1ME LINE L1 2222 3061 -3085 397 287 132 64 chr2 81833688 81833843 -171422740 + L1ME LINE L1 4501 4644 -1502 195 42 0 0 chr2 81833843 81833867 -171422716 + (TG)n Simple_repeat Simple_repeat 2 25 0 397 287 132 64 chr2 81833867 81834529 -171422054 + L1ME LINE L1 4644 5374 -772 34 45 0 15 chr2 81834568 81834599 -171421984 + AT_rich Low_complexity Low_complexity 1 31 -34 2279 74 0 3 chr2 81834599 81834884 -171421699 + AluSq SINE Alu 9 292 -21 34 45 0 15 chr2 81834884 81834918 -171421665 + AT_rich Low_complexity Low_complexity 31 65 0 379 262 136 14 chr2 81834960 81835141 -171421442 + L1ME LINE L1 5587 5787 -375 2084 130 3 0 chr2 81837350 81837649 -171418934 + AluSx SINE Alu 1 300 -12 327 302 126 22 chr2 81841011 81841193 -171415390 + HAL1 LINE L1 962 1162 -1345 8966 179 10 12 chr2 81841194 81842169 -171414414 - L1PA13 LINE L1 -3 6160 5184 1765 174 0 3 chr2 81842169 81842456 -171414127 - AluJb SINE Alu -20 292 7 8966 179 10 12 chr2 81842456 81844000 -171412583 - L1PA13 LINE L1 -979 5184 3630 4800 212 24 4 chr2 81844000 81845081 -171411502 + L1PA13 LINE L1 2543 3645 -2501 231 236 47 71 chr2 81845103 81845230 -171411353 + HAL1 LINE L1 1182 1305 -1202 2281 99 16 19 chr2 81845333 81845578 -171411005 - L1PA8A LINE L1 -528 5603 5357 1111 23 0 0 chr2 81845578 81845710 -171410873 - L1PA7 LINE L1 -4 6150 6019 2281 99 16 19 chr2 81845710 81845915 -171410668 - L1PA8A LINE L1 -774 5357 5153 3650 100 10 2 chr2 81845915 81846436 -171410147 + L1PA8A LINE L1 5607 6131 0 324 307 93 43 chr2 81848554 81848694 -171407889 + MIR3 SINE MIR 57 203 -5 232 219 149 35 chr2 81848742 81848856 -171407727 - MER103 DNA DNA -5 161 35 198 0 0 0 chr2 81850792 81850814 -171405769 + (A)n Simple_repeat Simple_repeat 1 22 0 28 61 0 0 chr2 81851584 81851633 -171404950 + AT_rich Low_complexity Low_complexity 1 49 0 22 0 0 0 chr2 81851664 81851686 -171404897 + AT_rich Low_complexity Low_complexity 1 22 0 31 26 0 0 chr2 81852233 81852271 -171404312 + AT_rich Low_complexity Low_complexity 1 38 0 288 0 0 0 chr2 81852307 81852339 -171404244 + (TG)n Simple_repeat Simple_repeat 2 33 0 2219 57 0 0 chr2 81852878 81853161 -171403422 + L1PA4 LINE L1 5873 6155 0 189 0 0 0 chr2 81853184 81853205 -171403378 + (A)n Simple_repeat Simple_repeat 1 21 0 21 36 0 0 chr2 81854175 81854203 -171402380 + AT_rich Low_complexity Low_complexity 1 28 0 2252 94 0 3 chr2 81854603 81854901 -171401682 + AluSg SINE Alu 1 297 -13 227 213 0 21 chr2 81856104 81856151 -171400432 + (CATATA)n Simple_repeat Simple_repeat 4 49 0 361 333 41 7 chr2 81856683 81856830 -171399753 - L2 LINE L2 -1 3312 3161 1372 177 28 7 chr2 81858278 81858560 -171398023 + L1MA4 LINE L1 6003 6290 -10 21 0 0 0 chr2 81858802 81858823 -171397760 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 81859086 81859109 -171397474 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr2 81860400 81860430 -171396153 + AT_rich Low_complexity Low_complexity 1 30 0 392 265 129 21 chr2 81861037 81861283 -171395300 + HsTC2 DNA Tc2 1306 1739 -159 1568 161 39 23 chr2 81862094 81862399 -171394184 + AluSx SINE Alu 1 310 -2 13753 39 1 0 chr2 81862399 81864876 -171391707 + L1PA4 LINE L1 3691 6165 0 23 0 0 0 chr2 81865443 81865466 -171391117 + GC_rich Low_complexity Low_complexity 1 23 0 23 92 0 0 chr2 81865860 81865925 -171390658 + AT_rich Low_complexity Low_complexity 1 65 0 1130 189 43 24 chr2 81866217 81866471 -171390112 + MER58B DNA MER1_type 47 305 -36 2644 195 29 0 chr2 81867770 81868297 -171388286 - MER34 LTR ERV1 0 542 1 23 0 0 0 chr2 81868429 81868452 -171388131 + AT_rich Low_complexity Low_complexity 1 23 0 623 262 30 18 chr2 81869367 81869415 -171387168 - MER5A DNA MER1_type -1 188 142 7491 31 0 0 chr2 81869415 81870471 -171386112 + L1PA4 LINE L1 5097 6152 -3 623 262 30 18 chr2 81870471 81870590 -171385993 - MER5A DNA MER1_type -47 142 19 289 267 29 48 chr2 81870620 81870725 -171385858 + MIR SINE MIR 70 172 -90 338 309 55 12 chr2 81872368 81872533 -171384050 - L1ME LINE L1 -657 5507 5336 301 119 68 0 chr2 81872538 81872597 -171383986 - MLT1G1 LTR MaLR -520 75 13 1012 101 0 0 chr2 81873631 81873769 -171382814 - AluSg/x SINE Alu -19 291 154 26 0 0 0 chr2 81873890 81873916 -171382667 + AT_rich Low_complexity Low_complexity 1 26 0 717 239 17 11 chr2 81874177 81874353 -171382230 + MER45 DNA AcHobo 6 182 -858 * 1520 249 69 17 chr2 81874350 81874482 -171382101 + MLT1E2 LTR MaLR 136 260 -366 2224 105 9 0 chr2 81874482 81874816 -171381767 + L1PA13 LINE L1 5825 6161 -2 1520 249 69 17 chr2 81874816 81875148 -171381435 + MLT1E2 LTR MaLR 260 624 -2 202 191 0 43 chr2 81876136 81876183 -171380400 + (TATG)n Simple_repeat Simple_repeat 2 46 0 21 57 0 0 chr2 81876214 81876249 -171380334 + AT_rich Low_complexity Low_complexity 1 35 0 636 170 0 0 chr2 81876389 81876495 -171380088 - FLAM_C SINE Alu -37 106 1 23 33 0 0 chr2 81877203 81877233 -171379350 + AT_rich Low_complexity Low_complexity 1 30 0 7373 33 0 1 chr2 81877240 81878767 -171377816 - L1PA4 LINE L1 -1 6154 4629 298 298 71 0 chr2 81879131 81879215 -171377368 + L1M4b LINE L1 271 360 -6499 * 781 253 10 52 chr2 81879213 81879521 -171377062 + L1M4b LINE L1 1847 2141 -4818 491 235 25 41 chr2 81879515 81879711 -171376872 + L1M4b LINE L1 2352 2544 -4594 * 1962 181 21 59 chr2 81879711 81879791 -171376792 + L1M4 LINE L1 5203 5285 -899 1726 156 46 40 chr2 81879791 81880164 -171376419 - THE1C LTR MaLR 0 375 1 1962 181 21 59 chr2 81880164 81880588 -171375995 + L1M4 LINE L1 5285 5682 -502 1242 107 34 30 chr2 81880936 81881169 -171375414 + L1PA4 LINE L1 5919 6152 -3 3322 137 33 2 chr2 81881185 81881731 -171374852 + L1PA16 LINE L1 5602 6164 -2 2400 43 0 27 chr2 81881914 81882214 -171374369 - AluY SINE Alu -17 294 3 350 353 36 7 chr2 81883092 81883231 -171373352 - L2 LINE L2 -7 3306 3164 362 346 179 26 chr2 81883328 81883947 -171372636 - L2 LINE L2 -359 2955 2242 261 0 0 0 chr2 81884286 81884315 -171372268 + (TG)n Simple_repeat Simple_repeat 1 29 0 215 280 19 0 chr2 81884315 81884422 -171372161 + (TA)n Simple_repeat Simple_repeat 1 109 0 36 70 0 0 chr2 81884616 81884687 -171371896 + AT_rich Low_complexity Low_complexity 1 71 0 1158 222 0 5 chr2 81884739 81884960 -171371623 - AluJo SINE Alu -90 222 3 223 146 67 22 chr2 81884972 81885061 -171371522 + (TA)n Simple_repeat Simple_repeat 2 94 0 500 298 53 19 chr2 81886681 81886889 -171369694 - MIR SINE MIR -18 244 30 831 328 19 3 chr2 81888743 81889118 -171367465 - Charlie7 DNA MER1_type -256 2356 1976 707 176 0 0 chr2 81889124 81889249 -171367334 + FLAM_C SINE Alu 1 125 -18 26 30 0 0 chr2 81889252 81889285 -171367298 + AT_rich Low_complexity Low_complexity 1 33 0 486 256 133 17 chr2 81889310 81889544 -171367039 - Charlie7 DNA MER1_type -639 1973 1713 580 78 0 0 chr2 81889598 81889675 -171366908 + AluSg/x SINE Alu 216 292 -17 2347 240 80 40 chr2 81889688 81890583 -171366000 + L1MC4a LINE L1 6873 7803 -5 1355 258 64 14 chr2 81890601 81891373 -171365210 - Charlie7 DNA MER1_type -906 1706 841 733 290 39 21 chr2 81891587 81892097 -171364486 - Charlie7 DNA MER1_type -2053 559 7 226 169 42 14 chr2 81892288 81892359 -171364224 + (TATAA)n Simple_repeat Simple_repeat 1 73 0 24 77 0 0 chr2 81892359 81892411 -171364172 + AT_rich Low_complexity Low_complexity 1 52 0 382 288 60 38 chr2 81892412 81892596 -171363987 - MIR SINE MIR -67 195 8 2289 76 7 7 chr2 81892816 81893117 -171363466 - AluSx SINE Alu -9 303 3 2438 170 0 41 chr2 81893626 81894090 -171362493 + MER65A LTR ERV1 1 445 0 243 0 0 0 chr2 81895104 81895131 -171361452 + (TA)n Simple_repeat Simple_repeat 1 27 0 1530 231 68 15 chr2 81895491 81895950 -171360633 + Charlie1b DNA MER1_type 37 519 -4 409 214 38 31 chr2 81896145 81896304 -171360279 - Charlie1 DNA MER1_type -109 2652 2493 283 359 41 14 chr2 81896321 81896466 -171360117 + MIR SINE MIR 96 244 -18 302 270 45 9 chr2 81896571 81896682 -171359901 - L1ME3 LINE L1 0 6162 6048 495 332 50 56 chr2 81896870 81897192 -171359391 + L2 LINE L2 2991 3310 -3 2106 100 14 0 chr2 81897309 81897600 -171358983 - AluSg SINE Alu -15 295 1 370 281 0 88 chr2 81897943 81898038 -171358545 - Charlie8 DNA MER1_type -91 239 164 2310 61 0 42 chr2 81898038 81898348 -171358235 - AluY SINE Alu -14 297 1 370 281 0 88 chr2 81898348 81898423 -171358160 - Charlie8 DNA MER1_type -166 164 84 197 412 0 0 chr2 81898971 81899068 -171357515 - L3b LINE CR1 -383 1200 1104 227 318 54 70 chr2 81899467 81899596 -171356987 - L3 LINE CR1 -124 1453 1327 21 0 0 0 chr2 81900165 81900186 -171356397 + AT_rich Low_complexity Low_complexity 1 21 0 28 29 0 0 chr2 81900287 81900322 -171356261 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr2 81901458 81901482 -171355101 + AT_rich Low_complexity Low_complexity 1 24 0 189 268 0 0 chr2 81902149 81902190 -171354393 - MIR SINE MIR -13 249 209 2789 22 0 0 chr2 81902327 81902642 -171353941 + AluYb8 SINE Alu 1 315 -3 26 50 0 0 chr2 81903290 81903330 -171353253 + AT_rich Low_complexity Low_complexity 1 40 0 2413 105 20 6 chr2 81903330 81903674 -171352909 - THE1B LTR MaLR -15 349 1 702 347 84 16 chr2 81903726 81904167 -171352416 + LTR33 LTR ERVL 6 476 -45 441 263 60 0 chr2 81904268 81904401 -171352182 + MIR SINE MIR 122 262 0 23 0 0 0 chr2 81905329 81905352 -171351231 + AT_rich Low_complexity Low_complexity 1 23 0 321 278 74 28 chr2 81905360 81905468 -171351115 - MIR3 SINE MIR -46 162 50 277 274 11 32 chr2 81905575 81905670 -171350913 + MIR SINE MIR 108 200 -62 1911 170 0 3 chr2 81905731 81906092 -171350491 - AluJb SINE Alu 0 362 3 1918 122 0 0 chr2 81907102 81907357 -171349226 + AluSx SINE Alu 4 258 -54 279 167 0 48 chr2 81907363 81907447 -171349136 + A-rich Low_complexity Low_complexity 4 83 0 993 163 0 0 chr2 81907447 81907625 -171348958 + GA-rich Low_complexity Low_complexity 1 178 0 229 146 0 36 chr2 81907627 81907682 -171348901 + (GGGA)n Simple_repeat Simple_repeat 2 54 0 690 262 148 0 chr2 81908714 81908916 -171347667 + MLT1E2 LTR MaLR 395 626 0 432 234 7 80 chr2 81908946 81909083 -171347500 + L2 LINE L2 3187 3313 0 192 305 47 31 chr2 81910696 81910824 -171345759 - L2 LINE L2 -730 2584 2455 2266 83 0 35 chr2 81910839 81911151 -171345432 - AluSx SINE Alu -11 301 1 362 268 0 7 chr2 81911309 81911462 -171345121 + (TA)n Simple_repeat Simple_repeat 2 153 0 3598 213 19 51 chr2 81911543 81912193 -171344390 + MER45B DNA AcHobo 1 619 -421 917 141 11 27 chr2 81912193 81912377 -171344206 + L1MB8 LINE L1 5988 6168 -10 3598 213 19 51 chr2 81912377 81912571 -171344012 + MER45B DNA AcHobo 619 818 -222 1098 237 27 97 chr2 81913221 81913706 -171342877 - LTR38 LTR ERV1 -9 547 97 246 304 25 6 chr2 81914985 81915143 -171341440 + L1MDb LINE L1 1179 1339 -5070 309 209 0 0 chr2 81915174 81915241 -171341342 + (CATA)n Simple_repeat Simple_repeat 2 68 0 3218 188 10 18 chr2 81915246 81915928 -171340655 + L1MB8 LINE L1 3765 4441 -1705 1394 211 55 40 chr2 81916028 81916426 -171340157 + L1MB8 LINE L1 5767 6170 -8 206 275 0 58 chr2 81916624 81916813 -171339770 + A-rich Low_complexity Low_complexity 2 179 0 2462 119 14 8 chr2 81916923 81917285 -171339298 - THE1B LTR MaLR 0 364 1 15635 234 27 25 chr2 81917360 81918997 -171337586 + L1PA15 LINE L1 1 1633 -5183 2002 156 0 0 chr2 81918997 81919298 -171337285 - AluSx SINE Alu -11 301 1 15635 234 27 25 chr2 81919298 81920170 -171336413 + L1PA15 LINE L1 1633 2502 -4314 10000 53 1 2 chr2 81920170 81922213 -171334370 - L1PA6 LINE L1 0 6154 4113 15635 234 27 25 chr2 81922213 81924133 -171332450 + L1PA15 LINE L1 2502 4416 -2400 1697 214 130 55 chr2 81924133 81924702 -171331881 - LTR9 LTR ERV1 0 612 1 15635 234 27 25 chr2 81924702 81927056 -171329527 + L1PA15 LINE L1 4416 6803 -13 32 86 0 0 chr2 81927056 81927137 -171329446 + AT_rich Low_complexity Low_complexity 1 81 0 291 291 13 0 chr2 81927506 81927585 -171328998 + MIR3 SINE MIR 81 160 -48 21 0 0 0 chr2 81927622 81927643 -171328940 + AT_rich Low_complexity Low_complexity 1 21 0 383 320 151 18 chr2 81927953 81928178 -171328405 - MIR SINE MIR -5 257 3 517 264 57 21 chr2 81928207 81928347 -171328236 - MER5A DNA MER1_type 0 189 45 317 328 92 0 chr2 81928577 81928708 -171327875 - MIR SINE MIR -1 261 119 458 310 9 35 chr2 81928880 81929112 -171327471 + L1ME LINE L1 5491 5716 -405 24 0 0 0 chr2 81929288 81929312 -171327271 + AT_rich Low_complexity Low_complexity 1 24 0 2542 160 11 5 chr2 81929491 81929934 -171326649 + L1PA16 LINE L1 5721 6166 0 417 267 72 58 chr2 81930753 81930965 -171325618 - MLT1I LTR MaLR -115 294 104 22 0 0 0 chr2 81931277 81931299 -171325284 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr2 81932701 81932726 -171323857 + AT_rich Low_complexity Low_complexity 1 25 0 556 96 0 0 chr2 81934370 81934476 -171322107 + AluY SINE Alu 205 311 0 356 55 18 0 chr2 81934912 81934967 -171321616 + (TC)n Simple_repeat Simple_repeat 1 56 0 229 154 19 19 chr2 81935340 81935392 -171321191 + GA-rich Low_complexity Low_complexity 4 55 0 1596 178 44 12 chr2 81935395 81935737 -171320846 + MSTC LTR MaLR 1 428 0 290 353 76 50 chr2 81935763 81936182 -171320401 - L2 LINE L2 -400 2914 2485 1572 214 111 33 chr2 81936242 81936610 -171319973 + L1M3 LINE L1 4879 5217 -951 213 94 0 0 chr2 81936610 81936642 -171319941 + (TAAAA)n Simple_repeat Simple_repeat 3 34 0 1572 214 111 33 chr2 81936642 81937103 -171319480 + L1M3 LINE L1 5217 5786 -382 244 196 128 59 chr2 81937076 81937178 -171319405 - L1MC4 LINE L1 -1319 6723 6615 * 214 171 49 0 chr2 81937178 81937219 -171319364 + (CATATA)n Simple_repeat Simple_repeat 1 43 0 233 175 63 0 chr2 81937219 81937282 -171319301 - L1MC4 LINE L1 -1339 6703 6637 520 295 71 49 chr2 81937424 81937648 -171318935 + L2 LINE L2 2549 2777 -537 710 279 118 85 chr2 81938011 81938300 -171318283 - MER21B LTR ERV1 -264 599 321 207 0 0 0 chr2 81938300 81938323 -171318260 + (TTG)n Simple_repeat Simple_repeat 2 24 0 710 279 118 85 chr2 81938323 81938518 -171318065 - MER21B LTR ERV1 -542 321 91 2119 122 0 10 chr2 81938518 81938814 -171317769 - AluSx SINE Alu -19 293 1 710 279 118 85 chr2 81938814 81938894 -171317689 - MER21B LTR ERV1 -772 91 15 1002 135 0 0 chr2 81939705 81939846 -171316737 + AluSg/x SINE Alu 154 294 -18 462 303 72 20 chr2 81939846 81940041 -171316542 + MER21B LTR ERV1 89 293 -570 180 0 0 0 chr2 81940041 81940061 -171316522 + (CAA)n Simple_repeat Simple_repeat 2 21 0 318 313 0 0 chr2 81941406 81941502 -171315081 - MIR SINE MIR -1 261 166 1167 0 0 0 chr2 81941562 81941693 -171314890 - AluY SINE Alu -2 309 179 2048 104 3 14 chr2 81943895 81944184 -171312399 + AluSq SINE Alu 1 286 -27 2340 93 0 3 chr2 81944310 81944620 -171311963 - AluSc SINE Alu 0 309 1 1977 258 39 4 chr2 81945702 81946190 -171310393 - MLT1E1 LTR MaLR 0 654 150 1911 279 50 61 chr2 81946218 81947042 -171309541 - MER21B LTR ERV1 -48 815 1 474 285 15 7 chr2 81947042 81947176 -171309407 - MLT1E1 LTR MaLR -519 135 1 262 305 112 43 chr2 81947292 81947479 -171309104 - MIR SINE MIR -43 219 20 31 0 0 0 chr2 81948446 81948477 -171308106 + AT_rich Low_complexity Low_complexity 1 31 0 238 310 28 0 chr2 81949248 81949319 -171307264 + MLT1K LTR MaLR 174 246 -342 272 274 29 44 chr2 81950083 81950228 -171306355 + L1ME LINE L1 5674 5821 -345 342 254 75 8 chr2 81950768 81950909 -171305674 - MIR SINE MIR -60 202 54 217 267 228 20 chr2 81951313 81951414 -171305169 - MER5A DNA MER1_type -67 122 1 845 284 138 43 chr2 81953153 81953544 -171303039 - LTR16A LTR ERVL -5 445 18 765 276 67 0 chr2 81953763 81953973 -171302610 - MER58A DNA MER1_type 0 224 1 928 211 108 9 chr2 81954071 81954294 -171302289 + Tigger3b DNA MER2_type 1 245 -986 * 2956 167 58 11 chr2 81954281 81954845 -171301738 - MER7C DNA MER2_type -10 592 2 6028 125 28 15 chr2 81954846 81955849 -171300734 + Tigger3b DNA MER2_type 203 1218 -13 3465 228 59 73 chr2 81956768 81957925 -171298658 + L1MD2 LINE L1 3914 5086 -1273 2225 92 0 3 chr2 81957925 81958228 -171298355 + AluY SINE Alu 1 302 -9 3465 228 59 73 chr2 81958228 81959554 -171297029 + L1MD2 LINE L1 5086 6339 -20 1772 124 0 8 chr2 81959562 81959811 -171296772 + AluSx SINE Alu 49 295 -17 22 0 0 0 chr2 81959871 81959893 -171296690 + AT_rich Low_complexity Low_complexity 1 22 0 310 399 35 32 chr2 81959968 81960218 -171296365 + L1MCb LINE L1 44 297 -5748 204 40 0 0 chr2 81960218 81960243 -171296340 + (CAAA)n Simple_repeat Simple_repeat 1 25 0 310 399 35 32 chr2 81960243 81960305 -171296278 + L1MCb LINE L1 297 357 -5688 368 297 74 40 chr2 81960569 81960744 -171295839 + L1MCb LINE L1 433 613 -5433 1356 273 38 41 chr2 81960757 81961436 -171295147 - L1M4 LINE L1 -1310 4836 4160 4584 164 76 15 chr2 81961446 81963365 -171293218 + L1PBa LINE L1 6 2307 -4556 3304 259 67 38 chr2 81963354 81964082 -171292501 - L1M4 LINE L1 -1958 4188 3483 * 1563 204 87 20 chr2 81964082 81964483 -171292100 + MSTC LTR MaLR 1 428 0 3304 259 67 38 chr2 81964483 81965374 -171291209 - L1M4 LINE L1 -2663 3483 2522 23 86 0 0 chr2 81965408 81965466 -171291117 + AT_rich Low_complexity Low_complexity 1 58 0 1332 188 8 59 chr2 81965929 81966286 -171290297 + L1MB1 LINE L1 3644 3982 -2164 * 2989 173 19 15 chr2 81966253 81966849 -171289734 + L1MB1 LINE L1 5386 5983 -185 4679 128 4 8 chr2 81966919 81967633 -171288950 - LTR17 LTR ERV1 -69 711 1 341 163 0 12 chr2 81967633 81967713 -171288870 + L1MB1 LINE L1 6087 6165 -3 1819 264 122 2 chr2 81967823 81968354 -171288229 + MLT1E2 LTR MaLR 32 626 0 432 234 7 80 chr2 81968384 81968521 -171288062 + L2 LINE L2 3187 3313 0 23 33 0 0 chr2 81970367 81970397 -171286186 + AT_rich Low_complexity Low_complexity 1 30 0 2409 50 13 10 chr2 81970622 81970924 -171285659 + AluY SINE Alu 1 303 -8 330 347 66 78 chr2 81970944 81971278 -171285305 - L2 LINE L2 -2 3270 2941 208 313 0 38 chr2 81971294 81971374 -171285209 + GA-rich Low_complexity Low_complexity 4 80 0 255 299 69 107 chr2 81971376 81971854 -171284729 - L2 LINE L2 -400 2914 2455 2286 80 0 35 chr2 81971869 81972181 -171284402 - AluSx SINE Alu -11 301 1 362 268 0 7 chr2 81972340 81972493 -171284090 + (TA)n Simple_repeat Simple_repeat 2 153 0 3598 213 19 51 chr2 81972574 81973224 -171283359 + MER45B DNA AcHobo 1 619 -421 963 130 11 27 chr2 81973224 81973408 -171283175 + L1MB8 LINE L1 5988 6168 -10 3598 213 19 51 chr2 81973408 81973602 -171282981 + MER45B DNA AcHobo 619 818 -222 1097 237 27 97 chr2 81974252 81974737 -171281846 - LTR38 LTR ERV1 -9 547 97 246 304 25 6 chr2 81976016 81976174 -171280409 + L1MDb LINE L1 1179 1339 -5070 309 209 0 0 chr2 81976205 81976272 -171280311 + (CATA)n Simple_repeat Simple_repeat 2 68 0 4239 200 8 7 chr2 81976277 81977192 -171279391 + L1 LINE L1 3765 4680 -1466 262 279 84 7 chr2 81977164 81977318 -171279265 + L1MDb LINE L1 3426 3591 -2815 * 2697 270 67 43 chr2 81977324 81979008 -171277575 + L1MDb LINE L1 3678 5400 -1006 249 200 33 0 chr2 81979000 81979060 -171277523 + L1MD3 LINE L1 7106 7167 -828 * 1021 25 0 0 chr2 81979061 81979181 -171277402 - AluY SINE Alu 0 311 192 1804 227 48 25 chr2 81979259 81979779 -171276804 + L1MD3 LINE L1 7411 7942 -53 25 0 0 0 chr2 81980056 81980081 -171276502 + AT_rich Low_complexity Low_complexity 1 25 0 335 258 83 0 chr2 81981508 81981628 -171274955 - L1MDa LINE L1 -4247 2293 2164 198 71 0 0 chr2 81982407 81982435 -171274148 + (TG)n Simple_repeat Simple_repeat 2 29 0 30 59 0 0 chr2 81983466 81983517 -171273066 + AT_rich Low_complexity Low_complexity 1 51 0 311 298 133 28 chr2 81983787 81983968 -171272615 + MIR SINE MIR 15 214 -48 189 373 101 25 chr2 81984204 81984362 -171272221 + L2 LINE L2 3102 3271 -1 243 364 33 0 chr2 81984515 81984636 -171271947 - MIR SINE MIR -38 224 100 1760 189 17 36 chr2 81984836 81985195 -171271388 - MER89 LTR ERV1 0 559 208 391 248 30 0 chr2 81985448 81985549 -171271034 - MER89 LTR ERV1 -453 106 3 25 31 0 0 chr2 81987699 81987731 -171268852 + AT_rich Low_complexity Low_complexity 1 32 0 28 61 0 0 chr2 81987741 81987790 -171268793 + AT_rich Low_complexity Low_complexity 1 49 0 332 227 136 45 chr2 81988583 81988730 -171267853 - MLT1G LTR MaLR 0 558 412 813 290 13 59 chr2 81988826 81989133 -171267450 - MLT1G LTR MaLR -297 293 1 189 367 70 23 chr2 81990811 81990939 -171265644 - MIR3 SINE MIR -69 139 6 653 70 10 0 chr2 81991043 81991143 -171265440 + (GA)n Simple_repeat Simple_repeat 2 102 0 190 293 24 73 chr2 81991264 81991346 -171265237 + L2 LINE L2 3212 3289 -24 1791 241 64 31 chr2 81991603 81992058 -171264525 - MLT1F1 LTR MaLR -2 565 88 2292 79 0 38 chr2 81992058 81992376 -171264207 + AluY SINE Alu 1 306 -5 1791 241 64 31 chr2 81992376 81992467 -171264116 - MLT1F1 LTR MaLR -479 88 1 532 281 100 0 chr2 81994067 81994227 -171262356 + MIR SINE MIR 78 253 -9 32 0 0 0 chr2 81994234 81994266 -171262317 + AT_rich Low_complexity Low_complexity 1 32 0 290 232 61 10 chr2 81994444 81994543 -171262040 + MER5C DNA MER1_type 1 104 -220 760 52 79 0 chr2 81994543 81994832 -171261751 + (TA)n Simple_repeat Simple_repeat 2 313 0 1375 85 0 10 chr2 81997635 81997856 -171258727 + L1PA4 LINE L1 5955 6155 0 34 0 0 0 chr2 81997856 81997890 -171258693 + AT_rich Low_complexity Low_complexity 1 34 0 26 64 0 0 chr2 81998097 81998144 -171258439 + AT_rich Low_complexity Low_complexity 1 47 0 25 0 0 0 chr2 81998765 81998790 -171257793 + AT_rich Low_complexity Low_complexity 1 25 0 497 310 56 92 chr2 81998796 81999080 -171257503 - L2 LINE L2 0 3272 2999 786 244 45 115 chr2 82000321 82000475 -171256108 + MSTC LTR MaLR 6 169 -259 729 191 39 0 chr2 82000475 82000653 -171255930 + L1MA8 LINE L1 6103 6287 -4 786 244 45 115 chr2 82000653 82000959 -171255624 + MSTC LTR MaLR 169 428 0 318 335 61 0 chr2 82001340 82001537 -171255046 + L1ME LINE L1 5536 5744 -377 206 425 89 11 chr2 82002440 82002722 -171253861 + L3 LINE CR1 1261 1564 -13 1321 180 113 3 chr2 82002878 82003222 -171253361 - MER3 DNA MER1_type 0 2624 2243 544 228 0 0 chr2 82003238 82003352 -171253231 - MER3 DNA MER1_type -42 167 54 315 276 125 47 chr2 82003707 82003863 -171252720 - MIR SINE MIR -66 196 15 381 377 124 36 chr2 82004669 82005144 -171251439 + L2 LINE L2 2524 3040 -273 297 0 0 0 chr2 82005275 82005308 -171251275 + (TA)n Simple_repeat Simple_repeat 1 33 0 625 205 87 10 chr2 82005412 82005607 -171250976 - MER63B DNA MER1_type -1 433 224 667 263 0 0 chr2 82005607 82005759 -171250824 - MER58B DNA MER1_type 0 341 190 907 260 5 5 chr2 82005807 82006030 -171250553 - MER63B DNA MER1_type -210 226 4 1490 192 127 38 chr2 82006063 82006502 -171250081 - MER31A LTR ERV1 -14 459 14 221 195 0 0 chr2 82006799 82006840 -171249743 - L2 LINE L2 -8 3305 3265 556 278 66 72 chr2 82006882 82007324 -171249259 - L2 LINE L2 -180 3133 2690 331 175 135 24 chr2 82007342 82007468 -171249115 + L1MC5 LINE L1 7790 7929 -32 485 310 43 16 chr2 82007502 82007689 -171248894 - L2 LINE L2 -633 2681 2490 591 293 100 63 chr2 82008407 82009090 -171247493 + L1MEd LINE L1 62 769 -5350 22 35 0 0 chr2 82009145 82009174 -171247409 + AT_rich Low_complexity Low_complexity 1 29 0 239 269 65 28 chr2 82009309 82009417 -171247166 + L1MEd LINE L1 1129 1240 -4879 28 29 0 0 chr2 82009766 82009801 -171246782 + AT_rich Low_complexity Low_complexity 1 35 0 1038 292 67 45 chr2 82010471 82010905 -171245678 - L2 LINE L2 -105 3208 2715 2368 181 40 2 chr2 82010905 82011353 -171245230 + MLT1C LTR MaLR 3 467 0 1038 292 67 45 chr2 82011353 82011627 -171244956 - L2 LINE L2 -598 2715 2448 375 234 47 8 chr2 82011896 82012024 -171244559 - L2 LINE L2 -780 2534 2402 294 183 0 0 chr2 82012157 82012228 -171244355 + (CA)n Simple_repeat Simple_repeat 1 71 0 22 35 0 0 chr2 82012699 82012728 -171243855 + AT_rich Low_complexity Low_complexity 1 29 0 191 167 0 21 chr2 82014119 82014167 -171242416 + CT-rich Low_complexity Low_complexity 2 48 0 11851 30 6 0 chr2 82014339 82016144 -171240439 - L1P2 LINE L1 -379 5776 3966 612 115 0 0 chr2 82016139 82016226 -171240357 - L1P4 LINE L1 -546 5620 5534 * 359 333 107 65 chr2 82016564 82017172 -171239411 - L2 LINE L2 -3 3310 2678 1929 138 0 0 chr2 82017506 82017826 -171238757 + AluSg SINE Alu 1 320 0 1261 73 0 0 chr2 82017947 82018112 -171238471 - L1PA3 LINE L1 -1284 4862 4698 * 6554 24 6 0 chr2 82018101 82019267 -171237316 + L1PA3 LINE L1 4850 6019 -136 33 0 0 0 chr2 82020176 82020209 -171236374 + AT_rich Low_complexity Low_complexity 1 33 0 313 350 35 10 chr2 82022182 82022379 -171234204 + L1ME LINE L1 28 229 -5841 997 289 38 23 chr2 82022622 82023145 -171233438 + L1ME LINE L1 524 1054 -5016 2053 253 113 19 chr2 82023427 82024503 -171232080 - L1MEc LINE L1 -2325 3890 2714 437 188 109 0 chr2 82024619 82024720 -171231863 - MER2 DNA MER2_type -135 210 99 559 194 70 0 chr2 82024768 82024897 -171231686 + MER63 DNA MER1_type 1 138 -923 1680 132 48 10 chr2 82024923 82025233 -171231350 - L1MA5 LINE L1 -2 6298 5977 452 205 12 0 chr2 82025233 82025316 -171231267 - MER2 DNA MER2_type -249 96 13 909 293 71 11 chr2 82025341 82026061 -171230522 - L1MEc LINE L1 -3516 2699 1984 1793 238 55 91 chr2 82026069 82026720 -171229863 - MLT1E1 LTR MaLR -4 650 23 1509 231 73 9 chr2 82027049 82027487 -171229096 - MLT1C LTR MaLR -1 466 1 452 233 11 11 chr2 82028428 82028608 -171227975 + GA-rich Low_complexity Low_complexity 1 180 0 2303 123 22 6 chr2 82029936 82030294 -171226289 - THE1B LTR MaLR 0 364 1 2440 62 0 3 chr2 82030860 82031167 -171225416 + AluY SINE Alu 1 306 -5 22 35 0 0 chr2 82032195 82032224 -171224359 + AT_rich Low_complexity Low_complexity 1 29 0 1386 273 16 75 chr2 82032551 82033060 -171223523 + MLT2B1 LTR ERVL 1 479 -41 216 148 25 12 chr2 82033125 82033206 -171223377 + (TA)n Simple_repeat Simple_repeat 2 83 0 252 276 19 6 chr2 82033222 82033378 -171223205 + (TA)n Simple_repeat Simple_repeat 2 159 0 49 43 0 0 chr2 82033803 82033873 -171222710 + AT_rich Low_complexity Low_complexity 1 70 0 394 263 123 18 chr2 82034416 82034587 -171221996 - L3 LINE CR1 -181 1396 1208 23 0 0 0 chr2 82034810 82034833 -171221750 + AT_rich Low_complexity Low_complexity 1 23 0 250 344 8 8 chr2 82035220 82035342 -171221241 - HAL1b LINE L1 -737 611 490 26 64 0 0 chr2 82035558 82035605 -171220978 + AT_rich Low_complexity Low_complexity 1 47 0 1991 179 61 22 chr2 82036352 82036761 -171219822 + MSTC LTR MaLR 4 428 0 1857 198 102 78 chr2 82037455 82038095 -171218488 + MER109 Unknown Unknown 1155 1809 -623 21 89 0 0 chr2 82038250 82038306 -171218277 + AT_rich Low_complexity Low_complexity 1 56 0 696 337 33 15 chr2 82038377 82038772 -171217811 + L1MC4 LINE L1 5435 5836 -1972 2160 233 19 31 chr2 82039134 82039855 -171216728 + MER44D DNA MER2_type 1 704 -1 305 266 26 117 chr2 82040679 82040833 -171215750 - MIR3 SINE MIR -36 172 33 1388 209 47 0 chr2 82041779 82042056 -171214527 + AluJo SINE Alu 1 290 -22 472 357 47 8 chr2 82042148 82042315 -171214268 + MIR SINE MIR 5 185 -77 769 222 61 28 chr2 82042315 82042527 -171214056 + MER20 DNA MER1_type 1 219 0 472 357 47 8 chr2 82042527 82042594 -171213989 + MIR SINE MIR 185 248 -14 246 291 25 25 chr2 82043466 82043545 -171213038 + L3b LINE CR1 1282 1360 -223 300 211 10 19 chr2 82043956 82044060 -171212523 + CT-rich Low_complexity Low_complexity 3 105 0 270 275 9 46 chr2 82044170 82044279 -171212304 - L1MC4 LINE L1 -1338 6704 6600 320 296 23 0 chr2 82044329 82044417 -171212166 + L1MC4 LINE L1 6614 6703 -1339 257 253 23 0 chr2 82044418 82044505 -171212078 + L1MC4 LINE L1 6615 6703 -1339 583 200 23 6 chr2 82044506 82044681 -171211902 + (TA)n Simple_repeat Simple_repeat 1 178 0 218 219 62 0 chr2 82044681 82044745 -171211838 + (TATATG)n Simple_repeat Simple_repeat 2 69 0 1002 312 137 4 chr2 82045450 82045989 -171210594 + L2 LINE L2 1725 2335 -979 513 316 88 5 chr2 82046006 82046199 -171210384 - MLT1K LTR MaLR -58 530 322 444 271 60 15 chr2 82046420 82046553 -171210030 + MIR SINE MIR 39 177 -85 673 164 0 8 chr2 82046553 82046675 -171209908 - AluJb SINE Alu -11 301 181 397 379 48 36 chr2 82046777 82047107 -171209476 + L2 LINE L2 2324 2657 -657 531 374 22 0 chr2 82047174 82047353 -171209230 + L2 LINE L2 2869 3051 -262 239 195 24 61 chr2 82047505 82047587 -171208996 + (CATA)n Simple_repeat Simple_repeat 2 80 0 204 303 26 71 chr2 82047598 82047753 -171208830 + L2 LINE L2 3162 3309 -4 2087 120 0 13 chr2 82047809 82048109 -171208474 + AluSc SINE Alu 1 296 -13 228 100 0 0 chr2 82048169 82048209 -171208374 + (CA)n Simple_repeat Simple_repeat 2 41 0 356 253 69 90 chr2 82048503 82048748 -171207835 + L1M4 LINE L1 2738 2977 -3169 26097 140 13 9 chr2 82048808 82050034 -171206549 + L1PA8A LINE L1 1 1220 -5226 189 74 0 0 chr2 82050034 82050061 -171206522 + (CAA)n Simple_repeat Simple_repeat 1 27 0 26097 140 13 9 chr2 82050061 82055185 -171201398 + L1PA8A LINE L1 1220 6443 -3 219 269 0 29 chr2 82055202 82055306 -171201277 + A-rich Low_complexity Low_complexity 4 104 0 366 74 0 0 chr2 82055495 82055549 -171201034 + (TG)n Simple_repeat Simple_repeat 2 55 0 3032 143 21 14 chr2 82055591 82056156 -171200427 - L1MA8 LINE L1 -15 6276 5708 506 258 18 12 chr2 82056414 82056581 -171200002 - L1MEc LINE L1 -3960 2436 2269 594 219 80 7 chr2 82056636 82056773 -171199810 + MER58B DNA MER1_type 195 341 0 4396 278 62 42 chr2 82056774 82057633 -171198950 - L1MEc LINE L1 -4131 2265 1425 2355 74 0 37 chr2 82057633 82057956 -171198627 + AluY SINE Alu 1 311 0 462 18 0 0 chr2 82057961 82058016 -171198567 + (TA)n Simple_repeat Simple_repeat 2 56 0 4396 278 62 42 chr2 82058016 82059158 -171197425 - L1MEc LINE L1 -4974 1422 305 639 71 0 0 chr2 82059158 82059243 -171197340 + (CTATT)n Simple_repeat Simple_repeat 4 88 0 4396 278 62 42 chr2 82059243 82059257 -171197326 - L1MEc LINE L1 -6091 305 293 2265 82 0 3 chr2 82059257 82059550 -171197033 - AluY SINE Alu -19 292 1 4396 278 62 42 chr2 82059550 82059701 -171196882 - L1MEc LINE L1 -6103 293 47 262 282 10 19 chr2 82059962 82060065 -171196518 - L1ME LINE L1 -5905 165 64 11376 228 31 55 chr2 82060140 82064020 -171192563 + L1P4 LINE L1 1783 5562 -604 468 275 37 57 chr2 82064015 82064259 -171192324 - L1MDa LINE L1 -4553 1987 1749 * 572 301 68 71 chr2 82064252 82064677 -171191906 - L1MDa LINE L1 -5633 897 474 26 74 0 0 chr2 82064958 82065012 -171191571 + AT_rich Low_complexity Low_complexity 1 54 0 22 70 0 0 chr2 82065071 82065114 -171191469 + AT_rich Low_complexity Low_complexity 1 43 0 40 37 0 0 chr2 82065622 82065676 -171190907 + AT_rich Low_complexity Low_complexity 1 54 0 25 51 0 0 chr2 82066167 82066206 -171190377 + AT_rich Low_complexity Low_complexity 1 39 0 845 254 76 25 chr2 82066413 82066688 -171189895 - MLT2B1 LTR ERVL -3 517 229 1985 145 9 12 chr2 82066703 82067047 -171189536 - MER61A LTR ERV1 0 343 1 20503 108 28 23 chr2 82067047 82067100 -171189483 - MER61A-int LTR ERV1 0 6066 6015 2181 51 0 67 chr2 82067100 82067416 -171189167 + AluY SINE Alu 1 295 -16 20503 108 28 23 chr2 82067416 82070963 -171185620 - MER61A-int LTR ERV1 -51 6015 1501 1857 72 0 0 chr2 82070963 82071198 -171185385 - AluY SINE Alu -21 290 56 20503 108 28 23 chr2 82071198 82071295 -171185288 - MER61A-int LTR ERV1 -4565 1501 1406 2083 193 76 60 chr2 82071311 82071996 -171184587 - MER61A-int LTR ERV1 -4440 777 1 1984 127 14 26 chr2 82071996 82072343 -171184240 - MER61A LTR ERV1 0 343 1 982 193 4 70 chr2 82072343 82072586 -171183997 - MLT2B1 LTR ERVL -291 229 3 1801 134 86 0 chr2 82072849 82073118 -171183465 + AluSg SINE Alu 1 292 -18 1482 208 58 17 chr2 82073135 82073481 -171183102 - MLT1A1 LTR MaLR 0 365 6 268 254 16 0 chr2 82073986 82074049 -171182534 + (TATATG)n Simple_repeat Simple_repeat 4 67 0 4474 151 48 1 chr2 82074050 82074844 -171181739 + Tigger3b DNA MER2_type 3 833 -398 2120 128 40 27 chr2 82074861 82075237 -171181346 - Tigger3(Golem) DNA MER2_type -173 2856 2476 5324 237 28 48 chr2 82075237 82077656 -171178927 + L1PB3 LINE L1 148 1644 -5219 566 188 27 0 chr2 82077667 82077779 -171178804 - L1PBb LINE L1 -5284 920 806 5336 180 60 12 chr2 82077779 82079888 -171176695 + L1PB3 LINE L1 4642 6865 -5 1176 221 3 35 chr2 82080066 82080427 -171176156 + L1MB7 LINE L1 5675 6011 -163 252 213 0 0 chr2 82081732 82081793 -171174790 + GA-rich Low_complexity Low_complexity 3 63 0 2111 123 0 7 chr2 82082987 82083280 -171173303 + AluSx SINE Alu 3 293 -19 207 0 0 0 chr2 82083298 82083321 -171173262 + (CA)n Simple_repeat Simple_repeat 2 24 0 5574 126 5 15 chr2 82083439 82084375 -171172208 + L1P LINE L1 2873 3799 -2347 2015 99 0 20 chr2 82084375 82084668 -171171915 + L1PA8A LINE L1 5844 6131 0 813 185 77 20 chr2 82084982 82085177 -171171406 - MER6B DNA MER2_type -3 207 2 1742 161 16 0 chr2 82085285 82085589 -171170994 + AluJb SINE Alu 1 309 -3 660 322 23 9 chr2 82085838 82086052 -171170531 + MIR SINE MIR 11 227 -35 2453 265 122 55 chr2 82086169 82086645 -171169938 + L1M4 LINE L1 2906 3349 -2797 2043 127 68 11 chr2 82086645 82087000 -171169583 - THE1C LTR MaLR 0 375 1 2453 265 122 55 chr2 82087000 82088311 -171168272 + L1M4 LINE L1 3349 4813 -1333 285 188 52 10 chr2 82088631 82088727 -171167856 + (TA)n Simple_repeat Simple_repeat 1 100 0 313 330 125 39 chr2 82088772 82089108 -171167475 - L1M4 LINE L1 -2201 3945 3581 1188 226 76 11 chr2 82089620 82089775 -171166808 - AluJo SINE Alu -9 293 150 201 39 0 0 chr2 82089775 82089801 -171166782 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 1188 226 76 11 chr2 82089801 82089920 -171166663 - AluJo SINE Alu -152 150 1 6763 35 0 1 chr2 82090082 82090923 -171165660 - L1PA4 LINE L1 0 6155 5341 21 36 0 0 chr2 82091047 82091075 -171165508 + AT_rich Low_complexity Low_complexity 1 28 0 248 248 159 21 chr2 82091096 82091241 -171165342 + MER104 DNA Tc2 14 178 -2 1189 259 121 13 chr2 82091292 82091747 -171164836 - MLT1D LTR MaLR 0 505 2 2360 139 20 2 chr2 82092107 82092516 -171164067 - L1MA5A LINE L1 -2 6295 5880 2542 52 0 3 chr2 82092535 82092842 -171163741 - AluY SINE Alu -5 306 1 180 97 0 0 chr2 82093133 82093164 -171163419 + (TTAA)n Simple_repeat Simple_repeat 1 31 0 2126 110 0 0 chr2 82093170 82093452 -171163131 - AluSc SINE Alu -26 283 2 1898 184 102 13 chr2 82093683 82094074 -171162509 + MSTB LTR MaLR 1 426 0 644 311 30 38 chr2 82094115 82094481 -171162102 + MER90 LTR ERV1 188 550 -64 329 327 68 34 chr2 82094568 82094834 -171161749 + L1ME4a LINE L1 5513 5787 -334 275 242 23 61 chr2 82094904 82095036 -171161547 + L1ME4a LINE L1 5883 6009 -112 1038 162 49 0 chr2 82095312 82095497 -171161086 - AluSg/x SINE Alu 0 312 119 8783 29 5 0 chr2 82096134 82097960 -171158623 + L1PA3 LINE L1 4326 6155 0 1614 174 125 28 chr2 82098009 82098370 -171158213 + MSTD LTR MaLR 1 396 0 24 0 0 0 chr2 82099104 82099128 -171157455 + AT_rich Low_complexity Low_complexity 1 24 0 372 369 51 6 chr2 82099318 82099475 -171157108 + MIR3 SINE MIR 16 179 -29 257 322 171 7 chr2 82100355 82100501 -171156082 + MIR SINE MIR 49 218 -44 489 306 208 5 chr2 82100731 82100947 -171155636 - MIR SINE MIR 0 262 3 1889 209 0 14 chr2 82101456 82101820 -171154763 - MLT1A1 LTR MaLR -6 359 1 1461 206 92 24 chr2 82102072 82102407 -171154176 + MLT1A2 LTR MaLR 1 358 -16 1131 243 93 40 chr2 82103545 82104655 -171151928 + L1ME2 LINE L1 4538 5587 -747 2094 128 0 0 chr2 82104655 82104944 -171151639 + AluSg SINE Alu 2 290 -20 732 23 0 0 chr2 82104944 82105030 -171151553 + (GGAA)n Simple_repeat Simple_repeat 3 88 0 1131 243 93 40 chr2 82105030 82105277 -171151306 + L1ME2 LINE L1 5586 6333 -1 967 245 44 50 chr2 82105808 82106151 -171150432 + MLT2C1 LTR ERVL 1 341 -56 228 148 0 19 chr2 82106155 82106209 -171150374 + L1MCa LINE L1 2015 2067 -4359 * 256 210 32 0 chr2 82106202 82106264 -171150319 - L1MC4 LINE L1 -1340 6702 6639 336 83 0 0 chr2 82106269 82106317 -171150266 + (CA)n Simple_repeat Simple_repeat 2 49 0 1948 161 25 9 chr2 82106317 82106641 -171149942 - MER2 DNA MER2_type -3 342 14 342 246 108 67 chr2 82106720 82106915 -171149668 - HAL1 LINE L1 -326 2181 1979 464 160 3 26 chr2 82106923 82107025 -171149558 + LTR24B LTR ERV1 1 97 -368 544 239 46 52 chr2 82107120 82107427 -171149156 + LTR24B LTR ERV1 161 569 0 869 302 88 30 chr2 82107457 82107994 -171148589 - HAL1 LINE L1 -550 1957 1390 321 254 90 70 chr2 82108108 82108309 -171148274 + L1M4 LINE L1 5106 5310 -836 22 0 0 0 chr2 82108312 82108334 -171148249 + AT_rich Low_complexity Low_complexity 1 22 0 933 224 10 29 chr2 82110098 82110303 -171146280 + MER58A DNA MER1_type 24 224 0 217 289 174 16 chr2 82111784 82111905 -171144678 - L2 LINE L2 -6 3307 3168 1292 276 111 15 chr2 82112754 82113066 -171143517 - MLT1D LTR MaLR 0 505 133 536 0 16 0 chr2 82113066 82113130 -171143453 + (TAGA)n Simple_repeat Simple_repeat 3 67 0 1292 276 111 15 chr2 82113130 82113278 -171143305 - MLT1D LTR MaLR -372 133 1 231 176 21 0 chr2 82113317 82113369 -171143214 - MLT2B3 LTR ERVL -2 552 390 329 169 12 0 chr2 82113382 82113465 -171143118 + (TAGA)n Simple_repeat Simple_repeat 4 87 0 1567 238 98 42 chr2 82113465 82113915 -171142668 - MLT2B1 LTR ERVL -42 478 4 351 167 46 35 chr2 82114978 82115152 -171141431 + (TA)n Simple_repeat Simple_repeat 1 176 0 227 95 57 38 chr2 82115233 82115338 -171141245 + (TA)n Simple_repeat Simple_repeat 2 108 0 1450 232 49 43 chr2 82116086 82116574 -171140009 + L1M4 LINE L1 3479 3969 -2177 597 316 0 0 chr2 82116619 82116777 -171139806 + MER45A DNA AcHobo 1 158 -20 21160 46 0 0 chr2 82116810 82120216 -171136367 - L1PA5 LINE L1 0 6154 2752 2336 245 97 57 chr2 82120223 82120329 -171136254 + L1M4 LINE L1 4066 4166 -1980 240 35 0 0 chr2 82120329 82120358 -171136225 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 2336 245 97 57 chr2 82120358 82120644 -171135939 + L1M4 LINE L1 4166 4439 -1707 2189 109 0 13 chr2 82120644 82120948 -171135635 + AluSc SINE Alu 1 300 -9 2336 245 97 57 chr2 82120948 82121160 -171135423 + L1M4 LINE L1 4439 4641 -1505 1048 215 84 32 chr2 82121160 82121444 -171135139 - AluJo SINE Alu -3 299 1 2336 245 97 57 chr2 82121444 82122078 -171134505 + L1M4 LINE L1 4641 5355 -791 479 195 55 1 chr2 82122072 82122136 -171134447 + L1ME3 LINE L1 6036 6095 -239 * 2939 175 14 9 chr2 82122136 82122702 -171133881 + L1MA4A LINE L1 5730 6298 -5 479 195 55 1 chr2 82122702 82122766 -171133817 + L1ME3 LINE L1 6095 6332 -2 2023 36 0 0 chr2 82122864 82123111 -171133472 - L1P LINE L1 -3100 3046 2800 1975 142 23 0 chr2 82123133 82123435 -171133148 - AluSx SINE Alu -3 309 1 229 301 80 18 chr2 82123886 82123999 -171132584 - LTR67 LTR ERVL -7 550 431 1369 145 35 9 chr2 82124046 82124274 -171132309 - AluSg/x SINE Alu -3 309 76 210 150 0 0 chr2 82124539 82124579 -171132004 + (TTCA)n Simple_repeat Simple_repeat 1 40 0 1373 306 129 40 chr2 82124915 82125805 -171130778 + L2 LINE L2 917 1885 -1429 602 313 17 33 chr2 82125808 82126048 -171130535 + MER69 DNA AcHobo 1 236 -990 2124 245 113 26 chr2 82126066 82127034 -171129549 + MER69 DNA AcHobo 1458 2509 -17 1157 300 39 81 chr2 82127036 82127108 -171129475 + L2 LINE L2 1888 1961 -1353 1853 149 43 25 chr2 82127108 82127476 -171129107 + THE1C LTR MaLR 1 375 0 1157 300 39 81 chr2 82127476 82128099 -171128484 + L2 LINE L2 1961 2554 -760 1588 189 50 88 chr2 82128431 82128956 -171127627 + MLT1D LTR MaLR 1 505 0 217 263 0 62 chr2 82129496 82129576 -171127007 - MIR SINE MIR -56 206 132 190 329 29 0 chr2 82130202 82130272 -171126311 - MIR SINE MIR -6 256 185 561 223 145 6 chr2 82130501 82130667 -171125916 + MER5A DNA MER1_type 1 189 0 1167 258 36 38 chr2 82131207 82131723 -171124860 + MLT1E LTR MaLR 42 593 0 905 244 6 0 chr2 82132720 82132896 -171123687 + MER5A DNA MER1_type 8 184 -5 297 296 59 77 chr2 82132747 82132916 -171123667 - MER5A DNA MER1_type -23 166 1 * 3018 138 32 59 chr2 82135260 82135849 -171120734 - MER4D LTR ERV1 -10 893 321 210 143 0 0 chr2 82135849 82135884 -171120699 + (TG)n Simple_repeat Simple_repeat 2 36 0 354 221 0 63 chr2 82135886 82135981 -171120602 - L1MC4 LINE L1 -1339 6703 6615 1396 148 122 8 chr2 82136067 82136330 -171120253 - MER4D LTR ERV1 -579 293 1 405 143 121 57 chr2 82136761 82136901 -171119682 + LTR19A LTR ERV1 327 475 -11 4031 143 42 12 chr2 82136990 82137680 -171118903 - MER50 LTR ERV1 -23 711 1 488 297 114 31 chr2 82138910 82139370 -171117213 - L1 LINE L1 -3540 2606 2112 367 339 69 64 chr2 82139723 82139912 -171116671 - HAL1 LINE L1 -854 1653 1466 2188 102 3 0 chr2 82139912 82140223 -171116360 - AluSq SINE Alu 0 312 1 367 339 69 64 chr2 82140223 82140439 -171116144 - HAL1 LINE L1 -1041 1466 1245 22 35 0 0 chr2 82140462 82140491 -171116092 + AT_rich Low_complexity Low_complexity 1 29 0 387 302 14 0 chr2 82140936 82141075 -171115508 - L1ME LINE L1 -552 5614 5474 2970 248 73 23 chr2 82141145 82141631 -171114952 - L1ME LINE L1 -758 5388 4928 452 184 51 0 chr2 82141631 82141729 -171114854 - L1PA16 LINE L1 0 6166 6064 2970 248 73 23 chr2 82141729 82142637 -171113946 - L1ME LINE L1 -1218 4928 4018 194 71 0 0 chr2 82142990 82143018 -171113565 - MIR SINE MIR -110 152 125 352 43 0 0 chr2 82143368 82143415 -171113168 + MADE1 DNA Mariner 34 80 0 189 0 0 0 chr2 82145465 82145486 -171111097 + (TG)n Simple_repeat Simple_repeat 2 22 0 22 0 0 0 chr2 82145871 82145893 -171110690 + AT_rich Low_complexity Low_complexity 1 22 0 7344 38 5 0 chr2 82146344 82147233 -171109350 + L1PA5 LINE L1 5254 6146 -8 38 22 0 0 chr2 82147236 82147281 -171109302 + AT_rich Low_complexity Low_complexity 1 45 0 2224 118 0 0 chr2 82147281 82147577 -171109006 + AluSx SINE Alu 1 296 -16 1799 95 8 0 chr2 82147593 82147845 -171108738 + L1PA11 LINE L1 5912 6165 -9 233 160 0 60 chr2 82148306 82148350 -171108233 - MIR SINE MIR -106 156 115 1955 100 0 0 chr2 82148350 82148600 -171107983 - AluSq SINE Alu -63 250 1 522 240 26 19 chr2 82148616 82148770 -171107813 - L1MC5 LINE L1 -1160 6801 6647 229 194 0 90 chr2 82148905 82148972 -171107611 - L1MC4a LINE L1 -1454 6354 6294 721 264 177 60 chr2 82149112 82149316 -171107267 - L1MC4a LINE L1 -1921 5887 5708 1615 140 4 0 chr2 82149316 82149551 -171107032 - AluSx SINE Alu -40 272 37 721 264 177 60 chr2 82149551 82149910 -171106673 - L1MC4a LINE L1 -2100 5708 5258 1550 262 22 46 chr2 82150411 82150994 -171105589 + L1MC4a LINE L1 7200 7768 -40 1282 56 0 0 chr2 82151247 82151408 -171105175 + L1PA11 LINE L1 6014 6174 0 1414 141 39 69 chr2 82151458 82151853 -171104730 - MER67D LTR ERV1 -242 272 1 369 43 0 0 chr2 82151866 82151913 -171104670 + (CA)n Simple_repeat Simple_repeat 2 48 0 880 233 6 0 chr2 82151932 82152104 -171104479 - MER45A DNA AcHobo 0 178 6 498 279 39 69 chr2 82152105 82152338 -171104245 + MIR SINE MIR 37 262 0 1942 93 68 35 chr2 82152464 82152841 -171103742 + LTR7 LTR ERV1 1 450 0 13105 153 21 45 chr2 82152841 82155572 -171101011 + HERVH LTR ERV1 1 2987 -4726 2639 163 13 2 chr2 82155568 82156023 -171100560 + HERVH LTR ERV1 3142 3601 -4112 * 7060 135 9 6 chr2 82156010 82157255 -171099328 + HERVH LTR ERV1 3809 5020 -2287 1675 113 0 0 chr2 82157259 82157507 -171099076 + HERVH LTR ERV1 7283 7530 -183 1880 191 67 36 chr2 82157524 82157969 -171098614 + LTR2B LTR ERV1 32 490 0 1136 111 16 21 chr2 82157969 82158159 -171098424 + HERVH LTR ERV1 7525 7713 0 2044 97 222 5 chr2 82158159 82158529 -171098054 + LTR7 LTR ERV1 1 450 0 1599 63 0 0 chr2 82158659 82158849 -171097734 + AluY SINE Alu 103 292 -19 227 281 0 0 chr2 82159159 82159223 -171097360 - MLT1I LTR MaLR -10 399 336 324 0 0 0 chr2 82160085 82160121 -171096462 + (TG)n Simple_repeat Simple_repeat 1 36 0 2275 157 117 51 chr2 82161910 82162410 -171094173 + MER34C LTR ERV1 1 541 -44 1115 211 107 79 chr2 82162410 82162698 -171093885 + MER31A LTR ERV1 1 308 -177 1925 134 10 13 chr2 82162698 82162997 -171093586 - AluSx SINE Alu -14 298 1 1115 211 107 79 chr2 82162997 82163176 -171093407 + MER31A LTR ERV1 308 481 -4 2275 157 117 51 chr2 82163176 82163222 -171093361 + MER34C LTR ERV1 541 583 -2 2431 188 61 94 chr2 82163873 82164625 -171091958 + LTR8A LTR ERV1 1 727 0 1395 195 72 79 chr2 82164627 82165164 -171091419 - MER67C LTR ERV1 -4 510 1 378 289 60 22 chr2 82165281 82165465 -171091118 + L1MC4a LINE L1 5682 5810 -524 813 275 183 30 chr2 82165467 82166226 -171090357 + L2 LINE L2 2432 3313 0 546 233 0 33 chr2 82166566 82166686 -171089897 + FLAM_C SINE Alu 1 116 -27 25 51 0 0 chr2 82166686 82166725 -171089858 + AT_rich Low_complexity Low_complexity 1 39 0 24 53 0 0 chr2 82166940 82166978 -171089605 + AT_rich Low_complexity Low_complexity 1 38 0 24 67 0 0 chr2 82167289 82167334 -171089249 + AT_rich Low_complexity Low_complexity 1 45 0 2664 99 6 3 chr2 82167852 82168215 -171088368 + THE1B LTR MaLR 1 364 0 538 271 30 74 chr2 82168762 82168965 -171087618 + MIR SINE MIR 3 196 -66 189 309 162 15 chr2 82169156 82169224 -171087359 + MIR3 SINE MIR 89 166 -42 28 0 0 0 chr2 82170145 82170173 -171086410 + AT_rich Low_complexity Low_complexity 1 28 0 2316 165 45 69 chr2 82170633 82171171 -171085412 - LTR26B LTR ERV1 0 531 7 333 267 59 0 chr2 82171469 82171570 -171085013 + L2 LINE L2 3153 3259 -13 398 183 43 43 chr2 82171817 82171910 -171084673 - L2 LINE L2 -2 3311 3219 390 323 97 9 chr2 82171940 82172157 -171084426 - MIR SINE MIR -4 258 23 475 317 125 56 chr2 82172192 82172672 -171083911 + L2 LINE L2 2216 2728 -586 1367 193 63 42 chr2 82173076 82173667 -171082916 + pTR5 LTR ERV1 743 1345 -1093 3990 148 114 30 chr2 82173682 82174439 -171082144 + LTR12 LTR ERV1 5 824 -2 484 324 35 0 chr2 82175298 82175471 -171081112 + MER20B DNA MER1_type 1 179 -604 271 331 162 7 chr2 82175585 82175721 -171080862 + MER91A DNA MER1_type 28 184 -12 556 229 12 24 chr2 82175739 82175905 -171080678 + MER20B DNA MER1_type 285 448 -335 196 364 61 30 chr2 82176745 82176877 -171079706 - L2 LINE L2 -222 3050 2915 2218 69 17 0 chr2 82177313 82177604 -171078979 + AluY SINE Alu 1 296 -15 188 349 143 15 chr2 82177735 82177864 -171078719 + MIR SINE MIR 38 180 -48 203 189 0 0 chr2 82179286 82179323 -171077260 + A-rich Low_complexity Low_complexity 1 37 0 1108 221 139 7 chr2 82179347 82179650 -171076933 - MER2 DNA MER2_type 0 344 2 21 0 0 0 chr2 82179670 82179691 -171076892 + AT_rich Low_complexity Low_complexity 1 21 0 330 297 121 33 chr2 82179961 82180267 -171076316 - L1ME4a LINE L1 -155 5966 5634 399 326 75 11 chr2 82180272 82180643 -171075940 - L1ME4a LINE L1 -1362 4784 4390 404 293 34 29 chr2 82180727 82180935 -171075648 - L1ME4a LINE L1 -1923 4223 4015 297 197 14 14 chr2 82181059 82181130 -171075453 + MLT2B3 LTR ERVL 1 71 -483 2026 191 38 79 chr2 82181245 82181749 -171074834 + MLT2B3 LTR ERVL 72 554 0 339 349 75 18 chr2 82181755 82182087 -171074496 - L1M4 LINE L1 -1368 4778 4428 2036 129 45 28 chr2 82182179 82182536 -171074047 - THE1B LTR MaLR -1 363 1 2114 96 43 0 chr2 82182697 82182979 -171073604 - AluSc SINE Alu -15 294 1 50 59 0 0 chr2 82183167 82183252 -171073331 + AT_rich Low_complexity Low_complexity 1 85 0 211 153 51 17 chr2 82183293 82183352 -171073231 + (TA)n Simple_repeat Simple_repeat 2 62 0 1548 221 75 51 chr2 82183455 82183948 -171072635 + MLT1D LTR MaLR 1 505 0 382 238 33 94 chr2 82183983 82184164 -171072419 - MER104 DNA Tc2 -2 178 9 3212 198 48 52 chr2 82186052 82186840 -171069743 - LTR1 LTR ERV1 0 785 1 13879 148 32 7 chr2 82186840 82189089 -171067494 - HUERS-P2 LTR ERV1 0 3088 783 1257 159 97 19 chr2 82189147 82189405 -171067178 - HUERS-P2 LTR ERV1 -2589 499 222 652 183 23 30 chr2 82189451 82189582 -171067001 - HUERS-P2 LTR ERV1 -2957 131 2 3417 181 70 45 chr2 82189586 82190339 -171066244 - LTR1 LTR ERV1 -13 772 1 734 215 0 0 chr2 82190383 82190513 -171066070 - FLAM_C SINE Alu -3 130 1 947 191 69 0 chr2 82190604 82190792 -171065791 - MER20 DNA MER1_type -18 201 1 274 324 123 12 chr2 82191496 82191666 -171064917 + MIR SINE MIR 36 224 -38 2329 121 85 10 chr2 82191995 82192393 -171064190 - MSTA LTR MaLR 0 428 1 32 75 0 0 chr2 82192928 82192995 -171063588 + AT_rich Low_complexity Low_complexity 1 67 0 180 179 0 0 chr2 82193152 82193191 -171063392 + (CAT)n Simple_repeat Simple_repeat 2 40 0 807 273 104 66 chr2 82194052 82194641 -171061942 - MLT1G LTR MaLR 0 590 7 232 318 0 0 chr2 82194873 82194939 -171061644 + GA-rich Low_complexity Low_complexity 1 66 0 473 284 80 40 chr2 82195099 82195300 -171061283 + MIR SINE MIR 45 253 -9 4325 129 1 6 chr2 82195344 82196008 -171060575 + L1PA16 LINE L1 5497 6157 -9 715 167 0 24 chr2 82196020 82196146 -171060437 - AluJb SINE Alu -189 123 1 2296 94 7 0 chr2 82196945 82197252 -171059331 - AluSp SINE Alu -4 309 1 235 247 65 52 chr2 82197395 82197472 -171059111 - MIR SINE MIR -76 186 109 781 201 216 11 chr2 82197847 82198116 -171058467 + MER33 DNA MER1_type 1 324 0 189 237 0 0 chr2 82198166 82198204 -171058379 - MIR SINE MIR -133 129 92 339 251 168 30 chr2 82199076 82199243 -171057340 + MIR SINE MIR 2 191 -71 319 328 97 0 chr2 82199323 82199457 -171057126 + MIR SINE MIR 68 214 -48 215 348 51 17 chr2 82200808 82200926 -171055657 - L2 LINE L2 0 3313 3192 232 355 115 70 chr2 82201192 82202404 -171054179 - L2 LINE L2 -342 2972 1686 1527 175 42 18 chr2 82202404 82202689 -171053894 + AluJo SINE Alu 1 292 -20 232 355 115 70 chr2 82202689 82202896 -171053687 - L2 LINE L2 -1628 1686 1490 201 333 0 0 chr2 82203188 82203287 -171053296 + A-rich Low_complexity Low_complexity 1 99 0 40 67 0 0 chr2 82203588 82203663 -171052920 + AT_rich Low_complexity Low_complexity 1 75 0 38 101 0 0 chr2 82203901 82204030 -171052553 + AT_rich Low_complexity Low_complexity 1 129 0 444 19 0 0 chr2 82204316 82204369 -171052214 + (TG)n Simple_repeat Simple_repeat 1 53 0 619 286 139 17 chr2 82204523 82205011 -171051572 - L1ME3 LINE L1 -268 5894 5352 424 313 70 34 chr2 82205468 82205790 -171050793 + HAL1b LINE L1 452 729 -619 27 62 0 0 chr2 82205884 82205932 -171050651 + AT_rich Low_complexity Low_complexity 1 48 0 21 0 0 0 chr2 82206036 82206057 -171050526 + AT_rich Low_complexity Low_complexity 1 21 0 307 353 69 76 chr2 82206575 82207078 -171049505 + L2 LINE L2 2773 3271 -1 1952 92 6 76 chr2 82207493 82207808 -171048775 - AluSq SINE Alu -20 293 1 1126 80 0 0 chr2 82207809 82207946 -171048637 - AluSq/x SINE Alu -176 137 1 515 282 57 9 chr2 82207982 82208209 -171048374 + L1M4 LINE L1 5024 5261 -885 185 218 109 0 chr2 82208461 82208516 -171048067 - MIR SINE MIR -90 172 112 1877 130 65 0 chr2 82208946 82209238 -171047345 + AluSx SINE Alu 1 311 -1 1073 191 10 15 chr2 82209405 82209609 -171046974 + AluJo SINE Alu 57 259 -53 358 150 0 25 chr2 82209620 82209700 -171046883 + (GGGA)n Simple_repeat Simple_repeat 3 80 0 238 371 0 0 chr2 82210272 82210342 -171046241 + L2 LINE L2 2988 3057 -256 1147 213 72 54 chr2 82210371 82210818 -171045765 + MLT1C LTR MaLR 15 466 -1 511 241 156 33 chr2 82210818 82211030 -171045553 + L2 LINE L2 3053 3290 -23 2183 110 0 10 chr2 82211032 82211333 -171045250 - AluSg SINE Alu -12 298 1 273 195 32 24 chr2 82211360 82211483 -171045100 + GA-rich Low_complexity Low_complexity 3 126 0 496 160 0 0 chr2 82211970 82212064 -171044519 + L1MA4 LINE L1 6196 6289 -11 28 29 0 0 chr2 82212064 82212099 -171044484 + AT_rich Low_complexity Low_complexity 1 35 0 28 48 0 0 chr2 82212598 82212640 -171043943 + AT_rich Low_complexity Low_complexity 1 42 0 25 0 0 0 chr2 82213838 82213863 -171042720 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr2 82213891 82213912 -171042671 + AT_rich Low_complexity Low_complexity 1 21 0 734 333 84 29 chr2 82214243 82214693 -171041890 + LTR33 LTR ERVL 33 507 -14 184 388 157 0 chr2 82214799 82214920 -171041663 + L2 LINE L2 3133 3272 0 672 268 62 5 chr2 82215989 82216183 -171040400 + MER20 DNA MER1_type 14 218 -1 248 303 15 0 chr2 82216191 82216257 -171040326 + MLT1L LTR MaLR 163 229 -386 1113 45 0 0 chr2 82216307 82216441 -171040142 - AluYa5/8 SINE Alu -7 303 170 23 33 0 0 chr2 82217907 82217937 -171038646 + AT_rich Low_complexity Low_complexity 1 30 0 200 226 16 0 chr2 82218036 82218098 -171038485 + (TA)n Simple_repeat Simple_repeat 2 64 0 53 30 0 0 chr2 82218833 82218900 -171037683 + AT_rich Low_complexity Low_complexity 1 67 0 1396 210 0 48 chr2 82218907 82219217 -171037366 - AluJo SINE Alu -15 297 3 979 131 12 94 chr2 82219951 82220196 -171036387 + L1PA15 LINE L1 5941 6165 0 745 237 11 11 chr2 82220661 82220851 -171035732 + L1MD3 LINE L1 7797 7986 -9 370 324 81 45 chr2 82221153 82221400 -171035183 + L1ME LINE L1 5297 5552 -569 2459 11 0 0 chr2 82221401 82221676 -171034907 - L1PA3 LINE L1 -440 5715 5441 3551 28 2 5 chr2 82221676 82222094 -171034489 + L1PA3 LINE L1 5731 6154 -1 236 226 0 0 chr2 82222224 82222277 -171034306 + L1MC4 LINE L1 6648 6700 -1342 237 222 0 0 chr2 82222282 82222345 -171034238 + (TA)n Simple_repeat Simple_repeat 2 64 0 462 280 38 8 chr2 82222496 82222628 -171033955 - MIR SINE MIR -86 176 41 259 268 0 0 chr2 82224260 82224316 -171032267 - L2 LINE L2 0 3272 3217 356 324 106 29 chr2 82224538 82224775 -171031808 - L1MB7 LINE L1 -261 5923 5706 2753 6 3 10 chr2 82224775 82225088 -171031495 - AluYa5 SINE Alu 0 311 1 356 324 106 29 chr2 82225088 82225434 -171031149 - L1MB7 LINE L1 -478 5706 5293 777 274 60 45 chr2 82225582 82225918 -171030665 - HAL1 LINE L1 -2166 341 1 200 296 92 41 chr2 82228456 82228554 -171028029 - L2 LINE L2 -1 3271 3169 42 71 0 0 chr2 82228610 82228694 -171027889 + AT_rich Low_complexity Low_complexity 1 84 0 283 240 48 48 chr2 82228965 82229069 -171027514 + MER112 DNA MER1_type 136 239 -21 673 387 18 11 chr2 82229849 82230231 -171026352 + L2 LINE L2 2289 2673 -641 1703 279 56 42 chr2 82230300 82230867 -171025716 + MLT1G LTR MaLR 16 590 0 219 366 105 24 chr2 82230868 82231114 -171025469 + L2 LINE L2 2794 3056 -257 2020 126 17 0 chr2 82231304 82231597 -171024986 + AluSx SINE Alu 1 298 -14 192 325 195 32 chr2 82232352 82232475 -171024108 - MIR3 SINE MIR -61 147 5 186 208 0 0 chr2 82233890 82233943 -171022640 + A-rich Low_complexity Low_complexity 1 53 0 28 29 0 0 chr2 82234036 82234071 -171022512 + AT_rich Low_complexity Low_complexity 1 35 0 214 320 97 51 chr2 82234239 82234414 -171022169 + MIR SINE MIR 78 260 -2 390 42 0 0 chr2 82234467 82234515 -171022068 + (TTTTG)n Simple_repeat Simple_repeat 2 49 0 1891 129 4 0 chr2 82234517 82234797 -171021786 - AluSg SINE Alu -29 281 1 26 0 0 0 chr2 82234851 82234877 -171021706 + AT_rich Low_complexity Low_complexity 1 26 0 2404 78 0 0 chr2 82234922 82235231 -171021352 - AluY SINE Alu -2 309 1 943 304 150 20 chr2 82235277 82236028 -171020555 - L2 LINE L2 -4 3309 2458 384 365 40 35 chr2 82236109 82236531 -171020052 - MLT1J LTR MaLR -50 461 38 1415 231 14 0 chr2 82236537 82236832 -171019751 + AluJo SINE Alu 1 299 -13 496 297 210 0 chr2 82236888 82237164 -171019419 - L2 LINE L2 -947 2367 2034 225 333 23 8 chr2 82237196 82237328 -171019255 - L1M4 LINE L1 -1354 4792 4659 1364 197 21 54 chr2 82237996 82238902 -171017681 - L1MD1 LINE L1 -8 6234 5143 785 220 23 0 chr2 82239483 82239656 -171016927 - MER45A DNA AcHobo 0 178 2 1859 122 68 0 chr2 82240735 82241014 -171015569 + AluSg SINE Alu 5 302 -8 25 51 0 0 chr2 82241647 82241686 -171014897 + AT_rich Low_complexity Low_complexity 1 39 0 242 261 111 71 chr2 82241990 82242315 -171014268 + L1M4 LINE L1 4477 4814 -1332 286 284 16 39 chr2 82242633 82242760 -171013823 + L1ME LINE L1 12 135 -5935 1575 209 3 3 chr2 82242977 82243283 -171013300 - AluJb SINE Alu -6 306 1 816 158 15 0 chr2 82243283 82243416 -171013167 - AluJb SINE Alu -177 135 1 295 289 77 39 chr2 82243865 82244073 -171012510 - L1M4 LINE L1 -3382 2764 2549 2628 55 0 0 chr2 82244267 82244578 -171012005 - AluY SINE Alu 0 311 1 358 229 149 17 chr2 82244587 82244762 -171011821 - L1M4 LINE L1 -3739 2407 2210 258 157 20 0 chr2 82245216 82245267 -171011316 - HSMAR1 DNA Mariner 0 1287 1236 22 35 0 0 chr2 82245290 82245319 -171011264 + AT_rich Low_complexity Low_complexity 1 29 0 334 242 0 0 chr2 82245653 82245719 -171010864 - MER67D LTR ERV1 -443 71 6 201 250 0 0 chr2 82247331 82247371 -171009212 + (ATG)n Simple_repeat Simple_repeat 3 42 0 24 0 0 0 chr2 82247493 82247517 -171009066 + AT_rich Low_complexity Low_complexity 1 24 0 331 327 0 62 chr2 82248398 82248493 -171008090 - MIR SINE MIR -13 249 167 2210 174 34 42 chr2 82248493 82248964 -171007619 + MLT1C LTR MaLR 1 467 0 331 327 0 62 chr2 82248964 82249030 -171007553 - MIR SINE MIR -95 167 98 207 283 20 71 chr2 82249060 82249159 -171007424 - L2 LINE L2 -244 3028 2935 183 80 0 0 chr2 82249349 82249374 -171007209 + (TTC)n Simple_repeat Simple_repeat 3 27 0 666 177 73 0 chr2 82249388 82249512 -171007071 - AluJb SINE Alu -179 133 1 185 297 151 5 chr2 82250444 82250629 -171005954 - L2 LINE L2 -54 3259 3048 1195 255 107 27 chr2 82250682 82251160 -171005423 - MLT1E2 LTR MaLR 0 626 111 26 0 0 0 chr2 82252703 82252729 -171003854 + AT_rich Low_complexity Low_complexity 1 26 0 1661 158 4 3 chr2 82253156 82253537 -171003046 + L1MA7 LINE L1 5175 5555 -736 2885 170 29 17 chr2 82253551 82254145 -171002438 + L1MA7 LINE L1 5685 6285 -6 317 275 100 85 chr2 82254569 82254637 -171001946 + L2 LINE L2 3111 3176 -137 2398 84 0 3 chr2 82254637 82254947 -171001636 - AluSq SINE Alu -4 309 1 317 275 100 85 chr2 82254947 82255078 -171001505 + L2 LINE L2 3176 3313 0 24 85 0 0 chr2 82255445 82255504 -171001079 + AT_rich Low_complexity Low_complexity 1 59 0 2082 110 3 7 chr2 82256418 82256717 -170999866 + AluY SINE Alu 1 298 -13 206 257 99 69 chr2 82256898 82256999 -170999584 - L2 LINE L2 0 3272 3169 2191 90 3 47 chr2 82257894 82258215 -170998368 + AluSg SINE Alu 4 310 0 354 219 40 106 chr2 82258793 82258944 -170997639 - MIR SINE MIR -3 259 119 345 305 86 0 chr2 82258943 82259071 -170997512 - MIR SINE MIR -33 229 91 * 22 0 0 0 chr2 82260669 82260691 -170995892 + AT_rich Low_complexity Low_complexity 1 22 0 200 222 0 19 chr2 82260964 82261018 -170995565 + T-rich Low_complexity Low_complexity 3 55 0 25 0 0 0 chr2 82261818 82261843 -170994740 + AT_rich Low_complexity Low_complexity 1 25 0 264 283 28 57 chr2 82262690 82262796 -170993787 - L2 LINE L2 0 3313 3211 721 311 153 20 chr2 82263462 82263526 -170993057 - L2 LINE L2 -923 2391 2337 1657 221 34 25 chr2 82263526 82263884 -170992699 + MLT1A1 LTR MaLR 1 361 -4 721 311 153 20 chr2 82263884 82264269 -170992314 - L2 LINE L2 -977 2337 1882 295 341 88 28 chr2 82265246 82265428 -170991155 + MIR3 SINE MIR 2 194 -14 501 242 15 23 chr2 82265954 82266070 -170990513 - MER119 DNA MER1_type 0 583 469 1352 165 64 0 chr2 82266070 82266319 -170990264 - MER65A LTR ERV1 0 445 181 721 161 62 0 chr2 82266319 82266449 -170990134 - FLAM_C SINE Alu -5 138 1 912 168 10 64 chr2 82266449 82266652 -170989931 - MER65A LTR ERV1 -253 192 1 680 260 40 26 chr2 82266652 82266879 -170989704 - MER65A-int LTR ERV1 0 4871 4642 301 310 52 0 chr2 82267261 82267377 -170989206 - MER117 DNA MER1_type -6 191 70 973 217 42 28 chr2 82268705 82268922 -170987661 - MER58A DNA MER1_type -4 220 1 192 182 0 0 chr2 82268988 82269032 -170987551 + (TA)n Simple_repeat Simple_repeat 2 45 0 2537 36 3 7 chr2 82269915 82270218 -170986365 + AluY SINE Alu 1 302 -9 754 260 75 5 chr2 82270222 82270422 -170986161 - MIR SINE MIR -34 228 15 407 347 132 34 chr2 82270937 82271727 -170984856 - L1M4 LINE L1 -886 5260 4394 30 27 0 0 chr2 82272163 82272200 -170984383 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr2 82272287 82272310 -170984273 + AT_rich Low_complexity Low_complexity 1 23 0 365 342 8 0 chr2 82273234 82273351 -170983232 + L2 LINE L2 2586 2703 -611 674 327 46 35 chr2 82273395 82273768 -170982815 + L2 LINE L2 2936 3312 -1 332 281 152 22 chr2 82274708 82274886 -170981697 + LTR16C LTR ERVL 225 425 -66 912 298 59 37 chr2 82275066 82275576 -170981007 + LTR33 LTR ERVL 1 521 0 22 88 0 0 chr2 82276333 82276390 -170980193 + AT_rich Low_complexity Low_complexity 1 57 0 333 301 28 7 chr2 82276428 82276571 -170980012 - HAL1 LINE L1 -828 1679 1534 332 266 82 44 chr2 82276611 82276769 -170979814 - HAL1 LINE L1 -1346 1161 998 665 151 9 0 chr2 82276771 82276877 -170979706 + U6 snRNA snRNA 1 107 0 22 43 0 21 chr2 82276924 82276952 -170979631 + AT_rich Low_complexity Low_complexity 1 29 -17 829 86 0 0 chr2 82276952 82277057 -170979526 + U6 snRNA snRNA 1 105 -2 22 43 0 21 chr2 82277057 82277075 -170979508 + AT_rich Low_complexity Low_complexity 29 46 0 933 257 0 0 chr2 82277705 82277911 -170978672 + L1MCa LINE L1 20 225 -6201 1316 212 42 12 chr2 82277976 82278435 -170978148 + LTR48 LTR ERV1 123 542 0 799 187 34 81 chr2 82278435 82278644 -170977939 + L1MCa LINE L1 223 421 -6005 * 4996 175 14 12 chr2 82278631 82279852 -170976731 + L1PB3 LINE L1 4808 6033 -121 2856 19 0 0 chr2 82279852 82280169 -170976414 + AluYb8 SINE Alu 1 317 -1 4996 175 14 12 chr2 82280169 82280290 -170976293 + L1PB3 LINE L1 6033 6152 -2 2260 248 25 10 chr2 82280330 82281049 -170975534 + L1MCa LINE L1 2445 3174 -3252 37 0 0 0 chr2 82281401 82281438 -170975145 + AT_rich Low_complexity Low_complexity 1 37 0 34 0 0 0 chr2 82282910 82282944 -170973639 + AT_rich Low_complexity Low_complexity 1 34 0 1574 127 58 7 chr2 82282944 82283236 -170973347 - L1MA4 LINE L1 -7 6293 5987 392 145 0 13 chr2 82283248 82283324 -170973259 - L1MA5 LINE L1 -4 6296 6222 1281 246 58 36 chr2 82283324 82283772 -170972811 + MER74B LTR ERVL 91 548 -74 308 162 71 61 chr2 82283685 82283784 -170972799 - MER88 LTR ERVL -286 178 79 * 211 322 35 23 chr2 82284743 82284830 -170971753 + MIR SINE MIR 18 105 -157 460 307 117 9 chr2 82284940 82285171 -170971412 - MIR SINE MIR 0 262 7 1237 279 70 29 chr2 82285409 82285853 -170970730 + LTR16B LTR ERVL 1 462 -2 28 0 0 0 chr2 82286069 82286097 -170970486 + AT_rich Low_complexity Low_complexity 1 28 0 2096 118 0 10 chr2 82287004 82287310 -170969273 - AluSx SINE Alu -3 309 7 434 171 0 0 chr2 82287455 82287531 -170969052 - FLAM_A SINE Alu -25 117 42 244 232 143 18 chr2 82287541 82287653 -170968930 - LTR67 LTR ERVL 0 557 432 356 261 35 17 chr2 82288363 82288478 -170968105 - MIR SINE MIR -65 197 81 235 269 0 0 chr2 82288550 82288602 -170967981 - MIR SINE MIR 0 262 211 2234 127 3 0 chr2 82288609 82288939 -170967644 - L1PA16 LINE L1 -9 6157 5827 457 296 40 0 chr2 82288939 82289064 -170967519 - MIR SINE MIR -33 229 100 4084 173 50 3 chr2 82289470 82290233 -170966350 + MER6 DNA MER2_type 23 821 -44 612 315 134 22 chr2 82290236 82290601 -170965982 - LTR16A LTR ERVL -29 421 16 2136 101 3 32 chr2 82290879 82291195 -170965388 - AluSq SINE Alu 0 313 7 506 259 52 52 chr2 82291910 82292084 -170964499 + MER69A DNA AcHobo 4 177 0 217 267 0 17 chr2 82292344 82292404 -170964179 - L2 LINE L2 -9 3304 3246 243 0 0 0 chr2 82292758 82292785 -170963798 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 238 388 122 25 chr2 82292804 82293049 -170963534 - L2 LINE L2 -27 3245 2977 263 329 75 12 chr2 82293190 82293351 -170963232 + MIR SINE MIR 32 202 -60 258 314 124 9 chr2 82293867 82293972 -170962611 - MIR SINE MIR -111 151 35 337 303 103 13 chr2 82294373 82294528 -170962055 + L3 LINE CR1 418 586 -991 228 218 0 0 chr2 82295628 82295683 -170960900 + (CA)n Simple_repeat Simple_repeat 2 56 0 1524 223 82 23 chr2 82295974 82296449 -170960134 + L1MA10 LINE L1 5818 6320 -14 1955 99 0 11 chr2 82296449 82296722 -170959861 + AluY SINE Alu 41 310 -1 32 57 0 0 chr2 82297335 82297388 -170959195 + AT_rich Low_complexity Low_complexity 1 53 0 777 314 155 13 chr2 82297711 82298358 -170958225 + L2 LINE L2 2568 3312 -1 264 284 0 0 chr2 82298680 82298747 -170957836 - HERVL LTR ERVL -1065 4699 4633 725 316 69 61 chr2 82299093 82299615 -170956968 - HERVL LTR ERVL -1356 4132 3604 548 291 178 0 chr2 82299962 82300175 -170956408 + MIR SINE MIR 2 252 -10 934 292 175 12 chr2 82300599 82301185 -170955398 - L2 LINE L2 -1 3312 2603 266 302 31 78 chr2 82301220 82301412 -170955171 - L2 LINE L2 -874 2440 2258 223 261 0 0 chr2 82301424 82301470 -170955113 + (TATG)n Simple_repeat Simple_repeat 3 48 0 186 265 20 20 chr2 82302302 82302351 -170954232 + L3 LINE CR1 1082 1130 -447 360 324 22 16 chr2 82302576 82302761 -170953822 + L1ME3A LINE L1 5700 5885 -279 4109 163 91 28 chr2 82302775 82303586 -170952997 - MER21B LTR ERV1 -1 862 1 325 284 21 21 chr2 82303593 82303734 -170952849 + L1ME3A LINE L1 6025 6165 -5 2702 10 0 0 chr2 82303976 82304273 -170952310 - AluYa5 SINE Alu -14 297 1 262 284 49 0 chr2 82304844 82304925 -170951658 - MIR SINE MIR -72 190 106 2930 84 10 62 chr2 82305551 82306037 -170950546 - L1PA13 LINE L1 -7 6156 5696 1158 214 0 0 chr2 82306055 82306256 -170950327 + MER58A DNA MER1_type 10 210 -14 2065 110 52 0 chr2 82306256 82306547 -170950036 - AluSq SINE Alu -7 306 1 205 195 0 0 chr2 82307421 82307462 -170949121 + (TAA)n Simple_repeat Simple_repeat 2 42 0 225 237 119 0 chr2 82308011 82308070 -170948513 - MER81 DNA DNA -29 85 20 450 0 0 0 chr2 82308410 82308460 -170948123 + (CA)n Simple_repeat Simple_repeat 2 51 0 344 320 65 33 chr2 82308833 82308986 -170947597 - MIR SINE MIR -104 158 1 21 36 0 0 chr2 82309435 82309463 -170947120 + AT_rich Low_complexity Low_complexity 1 28 0 501 224 47 0 chr2 82310578 82310685 -170945898 - MIR SINE MIR 0 262 151 362 236 0 0 chr2 82310685 82310757 -170945826 - MER45 DNA AcHobo -1 1580 1509 189 244 22 0 chr2 82310850 82310895 -170945688 - MIR SINE MIR -113 149 104 2029 184 141 0 chr2 82311265 82311690 -170944893 + MLT1D LTR MaLR 21 505 0 246 32 0 0 chr2 82311922 82311953 -170944630 + (TTTG)n Simple_repeat Simple_repeat 3 33 0 405 0 0 0 chr2 82313069 82313114 -170943469 + (CA)n Simple_repeat Simple_repeat 1 45 0 22 35 0 0 chr2 82313413 82313442 -170943141 + AT_rich Low_complexity Low_complexity 1 29 0 224 157 39 0 chr2 82313699 82313750 -170942833 + GA-rich Low_complexity Low_complexity 3 55 0 2464 188 32 8 chr2 82313754 82314253 -170942330 + MER67D LTR ERV1 2 512 -2 281 365 10 19 chr2 82315683 82315787 -170940796 + MIR SINE MIR 2 104 -158 769 295 23 27 chr2 82316495 82316756 -170939827 + MIR SINE MIR 3 262 0 200 208 0 113 chr2 82317151 82317204 -170939379 - L2 LINE L2 0 3272 3226 248 292 62 0 chr2 82317683 82317779 -170938804 - MER77 LTR ERV1 -90 515 414 1937 123 0 4 chr2 82319606 82319882 -170936701 + AluSg SINE Alu 36 310 0 1856 98 42 49 chr2 82319893 82320215 -170936368 + AluSg SINE Alu 1 320 0 21 0 0 0 chr2 82320300 82320321 -170936262 + AT_rich Low_complexity Low_complexity 1 21 0 336 123 35 0 chr2 82320388 82320445 -170936138 + Tigger2 DNA MER2_type 4 62 -2656 1897 154 7 0 chr2 82320445 82320750 -170935833 + Tigger2 DNA MER2_type 2399 2705 -13 696 191 32 0 chr2 82320868 82320994 -170935589 + FLAM_C SINE Alu 1 130 -3 240 143 0 78 chr2 82321959 82322036 -170934547 + (TAAA)n Simple_repeat Simple_repeat 4 74 0 602 260 170 14 chr2 82323513 82323736 -170932847 - MIR SINE MIR 0 262 5 557 198 99 113 chr2 82324003 82324225 -170932358 - MER20 DNA MER1_type 0 219 1 283 344 31 39 chr2 82324471 82324572 -170932011 + MIR3 SINE MIR 6 107 -101 279 79 0 0 chr2 82324572 82324610 -170931973 + (TTA)n Simple_repeat Simple_repeat 1 38 0 283 344 31 39 chr2 82324610 82324636 -170931947 + MIR3 SINE MIR 107 132 -76 1123 277 70 36 chr2 82324984 82325453 -170931130 + MLT1J LTR MaLR 13 497 -14 549 301 106 22 chr2 82325504 82325730 -170930853 - MLT1K LTR MaLR -14 574 330 260 294 63 92 chr2 82326546 82326849 -170929734 + L2 LINE L2 2682 2975 -339 760 42 0 0 chr2 82326949 82327044 -170929539 - L1PA3 LINE L1 -2 6153 6059 319 317 30 0 chr2 82327187 82327288 -170929295 + L2 LINE L2 3169 3272 0 21 0 0 0 chr2 82328196 82328217 -170928366 + AT_rich Low_complexity Low_complexity 1 21 0 467 197 162 21 chr2 82328801 82328943 -170927640 + MIR SINE MIR 6 167 -95 986 244 127 61 chr2 82330131 82330664 -170925919 + MLT1E LTR MaLR 1 626 0 186 43 0 0 chr2 82330741 82330764 -170925819 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 494 300 131 33 chr2 82331096 82331676 -170924907 + L1MEd LINE L1 483 1119 -5000 278 305 80 72 chr2 82331692 82332356 -170924227 + L1MB5 LINE L1 2963 3620 -2526 2130 134 0 0 chr2 82332356 82332662 -170923921 - AluSx SINE Alu -6 306 1 278 305 80 72 chr2 82332662 82333365 -170923218 + L1MB5 LINE L1 3620 4341 -1805 381 198 0 0 chr2 82333408 82333494 -170923089 + (TA)n Simple_repeat Simple_repeat 1 86 0 381 229 0 0 chr2 82333576 82333681 -170922902 + (CATATA)n Simple_repeat Simple_repeat 4 108 0 239 274 0 0 chr2 82333821 82333883 -170922700 + L1MB5 LINE L1 4551 4612 -1534 254 282 0 0 chr2 82334067 82334145 -170922438 + L1P LINE L1 4935 5012 -1134 219 220 0 0 chr2 82334232 82334282 -170922301 + (TA)n Simple_repeat Simple_repeat 2 51 0 1366 173 3 108 chr2 82334285 82334448 -170922135 - AluJb SINE Alu -13 289 175 450 0 0 0 chr2 82334448 82334498 -170922085 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 1366 173 3 108 chr2 82334498 82334657 -170921926 - AluJb SINE Alu -127 175 1 571 309 39 73 chr2 82334818 82335380 -170921203 + L1MB5 LINE L1 5328 5867 -307 * 3951 81 43 0 chr2 82335368 82336009 -170920574 - L1PA7 LINE L1 -311 5843 5177 2478 67 0 15 chr2 82336009 82336339 -170920244 + L1PA7 LINE L1 5823 6148 -6 2177 214 62 84 chr2 82336920 82337611 -170918972 - LTR8 LTR ERV1 0 691 16 225 114 136 23 chr2 82337616 82337660 -170918923 - LTR8 LTR ERV1 -642 49 1 290 238 0 0 chr2 82338419 82338482 -170918101 + L1ME4a LINE L1 5985 6047 -74 32 26 0 0 chr2 82338997 82339036 -170917547 + AT_rich Low_complexity Low_complexity 1 39 0 24 0 0 0 chr2 82339700 82339724 -170916859 + AT_rich Low_complexity Low_complexity 1 24 0 334 298 156 28 chr2 82339858 82339999 -170916584 - L2 LINE L2 0 3272 3114 234 258 30 0 chr2 82340609 82340675 -170915908 - L2 LINE L2 -209 3063 2996 551 340 62 43 chr2 82340703 82341267 -170915316 - L2 LINE L2 -443 2871 2297 273 79 0 0 chr2 82341616 82341654 -170914929 - MADE1 DNA Mariner -34 46 9 219 69 0 0 chr2 82341655 82341684 -170914899 + (TG)n Simple_repeat Simple_repeat 1 29 0 957 286 40 0 chr2 82341810 82342062 -170914521 - MIR SINE MIR 0 262 1 486 277 132 35 chr2 82342220 82342530 -170914053 - MLT1I LTR MaLR -4 405 66 2080 138 0 0 chr2 82343261 82343559 -170913024 + AluSx SINE Alu 1 298 -14 219 271 0 14 chr2 82343833 82343903 -170912680 + (TA)n Simple_repeat Simple_repeat 1 69 0 257 118 20 0 chr2 82343904 82343955 -170912628 + (CA)n Simple_repeat Simple_repeat 1 52 0 412 242 0 11 chr2 82344419 82344510 -170912073 + MIR SINE MIR 32 121 -141 238 259 19 0 chr2 82344540 82344594 -170911989 - MER77 LTR ERV1 -9 596 542 529 273 116 22 chr2 82344594 82344957 -170911626 - L1MEc LINE L1 -5047 1349 953 254 281 12 12 chr2 82344961 82345043 -170911540 - L1MEc LINE L1 -6279 117 36 23 68 0 0 chr2 82345135 82345179 -170911404 + AT_rich Low_complexity Low_complexity 1 44 0 21 71 0 0 chr2 82345461 82345503 -170911080 + AT_rich Low_complexity Low_complexity 1 42 0 26 30 0 0 chr2 82345764 82345797 -170910786 + AT_rich Low_complexity Low_complexity 1 33 0 201 193 102 91 chr2 82347003 82347091 -170909492 + MER5A DNA MER1_type 35 123 -66 377 380 153 0 chr2 82347105 82347242 -170909341 + MER91A DNA MER1_type 15 172 -24 366 42 0 0 chr2 82347290 82347338 -170909245 + (TG)n Simple_repeat Simple_repeat 2 49 0 27 49 0 0 chr2 82347663 82347704 -170908879 + AT_rich Low_complexity Low_complexity 1 41 0 705 206 0 0 chr2 82347971 82348102 -170908481 + FLAM_A SINE Alu 6 136 -6 1994 274 45 18 chr2 82349078 82349331 -170907252 + L1ME2 LINE L1 5451 5695 -469 2366 97 0 0 chr2 82349331 82349640 -170906943 - AluSc SINE Alu 0 309 1 1994 274 45 18 chr2 82349640 82350071 -170906512 + L1ME2 LINE L1 5695 6154 -10 1841 238 82 33 chr2 82350141 82350209 -170906374 - MLT1F LTR MaLR 0 542 479 2108 104 4 0 chr2 82350209 82350511 -170906072 + AluSx SINE Alu 3 305 0 1841 238 82 33 chr2 82350511 82350929 -170905654 - MLT1F LTR MaLR -63 479 31 280 283 22 22 chr2 82351017 82351155 -170905428 + L1MC4 LINE L1 7904 8041 -1 4705 151 32 4 chr2 82353862 82354616 -170901967 - LTR39 LTR ERV1 0 783 9 522 238 49 60 chr2 82354797 82354982 -170901601 + LTR50 LTR ERVL 1 183 -612 1313 250 99 42 chr2 82355314 82355861 -170900722 + MLT1E1 LTR MaLR 26 654 0 414 0 0 0 chr2 82355893 82355939 -170900644 + (CA)n Simple_repeat Simple_repeat 1 46 0 2327 113 7 0 chr2 82358339 82358649 -170897934 - AluSx SINE Alu 0 312 1 2270 94 0 17 chr2 82359750 82360048 -170896535 - AluSq SINE Alu -20 293 1 1046 238 5 5 chr2 82360077 82360291 -170896292 + MER58A DNA MER1_type 11 224 0 513 137 29 0 chr2 82360552 82360654 -170895929 + L1MB3 LINE L1 6079 6183 0 1676 272 63 14 chr2 82360857 82361570 -170895013 + L1ME2 LINE L1 3367 4114 -2032 2519 241 57 53 chr2 82361588 82363247 -170893336 + L1ME2 LINE L1 4450 6124 -40 2800 10 0 0 chr2 82363316 82363623 -170892960 - AluYa5 SINE Alu -4 307 1 4735 201 46 49 chr2 82363629 82364006 -170892577 - L1MB3 LINE L1 -3 6180 5804 270 0 0 0 chr2 82364006 82364036 -170892547 + (CA)n Simple_repeat Simple_repeat 2 31 0 4735 201 46 49 chr2 82364036 82365571 -170891012 - L1MB3 LINE L1 -379 5804 4265 189 74 0 0 chr2 82365571 82365598 -170890985 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 4735 201 46 49 chr2 82365598 82365810 -170890773 - L1MB3 LINE L1 -1918 4265 4054 1703 216 56 20 chr2 82365805 82366305 -170890278 - L1MB3 LINE L1 -2502 3644 3127 * 228 222 0 0 chr2 82366422 82366467 -170890116 + (TGAG)n Simple_repeat Simple_repeat 4 48 0 271 332 114 45 chr2 82366574 82366776 -170889807 - MIR SINE MIR -16 246 31 208 325 114 18 chr2 82367914 82368080 -170888503 + MIR SINE MIR 67 248 -14 2322 97 3 0 chr2 82368114 82368425 -170888158 - AluSx SINE Alu 0 312 1 359 354 51 13 chr2 82368467 82368625 -170887958 + MIR3 SINE MIR 20 183 -25 391 329 35 7 chr2 82370522 82370665 -170885918 + MIR SINE MIR 31 177 -85 626 261 75 15 chr2 82370687 82370886 -170885697 - MIR SINE MIR -30 232 22 1755 163 171 18 chr2 82371108 82371506 -170885077 - MLT1C LTR MaLR -6 461 3 388 291 17 51 chr2 82371591 82371766 -170884817 + MIR SINE MIR 77 245 -17 730 201 141 16 chr2 82373175 82373359 -170883224 - MER20 DNA MER1_type -5 214 8 950 233 35 13 chr2 82373598 82373826 -170882757 + L1M4b LINE L1 4 236 -6623 351 275 29 7 chr2 82373894 82374032 -170882551 + L1MC5 LINE L1 7355 7495 -466 2705 91 0 0 chr2 82375694 82376044 -170880539 - THE1A LTR MaLR -5 350 1 236 260 228 0 chr2 82376218 82376341 -170880242 + MER112 DNA MER1_type 67 217 -43 1484 245 26 14 chr2 82377484 82377835 -170878748 + MLT1A1 LTR MaLR 3 357 -8 534 356 13 4 chr2 82377841 82378066 -170878517 - MIR SINE MIR -29 233 7 297 325 145 42 chr2 82378289 82379000 -170877583 + L2 LINE L2 1701 2484 -830 399 268 67 86 chr2 82379168 82379400 -170877183 - MIR SINE MIR -25 237 3 2392 110 0 0 chr2 82380601 82380911 -170875672 - AluSx SINE Alu -2 310 1 2218 76 17 3 chr2 82381452 82381742 -170874841 - AluSx SINE Alu -18 294 1 344 321 21 14 chr2 82383310 82383450 -170873133 + MIR SINE MIR 120 260 -2 305 143 92 151 chr2 82383644 82383763 -170872820 + LTR37A LTR ERV1 4 115 -311 393 219 92 0 chr2 82383785 82383904 -170872679 + LTR37A LTR ERV1 296 425 -1 2258 92 27 0 chr2 82384876 82385170 -170871413 + AluY SINE Alu 2 303 -8 439 146 138 41 chr2 82385410 82385533 -170871050 + L1MA8 LINE L1 6157 6291 0 228 352 29 9 chr2 82385693 82385798 -170870785 - L3 LINE CR1 -3 1574 1468 1642 160 17 27 chr2 82386359 82386659 -170869924 - AluJb SINE Alu -10 302 6 756 199 39 0 chr2 82386762 82386918 -170869665 + L1MA9 LINE L1 6115 6276 -36 229 227 149 35 chr2 82387226 82387367 -170869216 + MIR3 SINE MIR 3 159 -49 664 189 45 0 chr2 82387381 82387513 -170869070 - MER58B DNA MER1_type -13 328 191 2232 88 0 0 chr2 82388546 82388829 -170867754 + AluSx SINE Alu 24 306 -6 223 315 100 0 chr2 82389037 82389167 -170867416 - MIR SINE MIR -36 226 84 199 318 91 35 chr2 82389602 82389800 -170866783 + L2 LINE L2 2852 3060 -212 204 258 195 42 chr2 82389971 82390161 -170866422 + MIR SINE MIR 1 219 -43 317 357 93 0 chr2 82390180 82390309 -170866274 - MIR3 SINE MIR -47 161 21 2607 121 43 68 chr2 82391473 82391755 -170864828 - MSTA LTR MaLR 0 428 159 2420 77 0 0 chr2 82391755 82392053 -170864530 + AluY SINE Alu 1 298 -13 2607 121 43 68 chr2 82392053 82392209 -170864374 - MSTA LTR MaLR -269 159 1 236 239 0 0 chr2 82392967 82393013 -170863570 - L2 LINE L2 -11 3261 3216 218 370 0 12 chr2 82393049 82393130 -170863453 - MIR SINE MIR -182 80 1 363 23 0 0 chr2 82393185 82393229 -170863354 + (CA)n Simple_repeat Simple_repeat 2 45 0 358 310 143 23 chr2 82394507 82394765 -170861818 - L2 LINE L2 -338 2976 2688 348 277 45 52 chr2 82397334 82397489 -170859094 - L2 LINE L2 -4 3309 3156 540 316 134 46 chr2 82398026 82398701 -170857882 - L2 LINE L2 -266 3047 2314 654 311 110 18 chr2 82399391 82399828 -170856755 - L2 LINE L2 -9 3304 2828 424 242 25 50 chr2 82400205 82400325 -170856258 - MER20 DNA MER1_type -102 117 1 1492 192 29 0 chr2 82401687 82402000 -170854583 + MER33 DNA MER1_type 1 322 -2 23 33 0 0 chr2 82403284 82403314 -170853269 + AT_rich Low_complexity Low_complexity 1 30 0 184 337 63 21 chr2 82403459 82403554 -170853029 - L2 LINE L2 -35 3237 3139 26 0 0 0 chr2 82403921 82403947 -170852636 + AT_rich Low_complexity Low_complexity 1 26 0 410 0 20 0 chr2 82405148 82405198 -170851385 + (CA)n Simple_repeat Simple_repeat 2 52 0 245 333 24 73 chr2 82405850 82405973 -170850610 - MIR SINE MIR -140 122 6 580 326 82 0 chr2 82408605 82408838 -170847745 + MIR SINE MIR 7 258 -4 300 284 12 0 chr2 82409239 82409320 -170847263 - MIR SINE MIR -30 232 151 185 365 47 9 chr2 82410898 82411005 -170845578 - MIR3 SINE MIR -53 155 45 26 0 0 0 chr2 82411064 82411090 -170845493 + AT_rich Low_complexity Low_complexity 1 26 0 474 299 106 71 chr2 82411139 82411574 -170845009 + MLT1H1 LTR MaLR 104 553 -2 1089 258 12 4 chr2 82411922 82412178 -170844405 - MER47B DNA MER2_type -160 258 1 587 314 91 24 chr2 82412283 82412994 -170843589 - L1M4 LINE L1 -1700 4446 3688 1124 263 69 28 chr2 82413009 82413587 -170842996 - L1MC5 LINE L1 -24 7937 7336 541 161 58 29 chr2 82413599 82413736 -170842847 - Charlie1 DNA MER1_type -7 2754 2614 1643 250 107 25 chr2 82413742 82414266 -170842317 - Charlie1a DNA MER1_type -883 572 6 28 0 0 0 chr2 82414551 82414579 -170842004 + AT_rich Low_complexity Low_complexity 1 28 0 278 258 45 0 chr2 82418059 82418148 -170838435 - MER5C DNA MER1_type 0 324 232 4126 259 83 71 chr2 82418148 82419382 -170837201 + L1MCa LINE L1 1 1219 -5345 1991 91 0 19 chr2 82419382 82419647 -170836936 - AluSx SINE Alu -15 297 38 4126 259 83 71 chr2 82419647 82421947 -170834636 + L1MCa LINE L1 1219 3719 -2845 1694 196 162 18 chr2 82421954 82422393 -170834190 + MLT1D LTR MaLR 4 505 0 651 49 0 0 chr2 82422432 82422514 -170834069 - L1PA7 LINE L1 -936 5210 5129 7638 51 0 2 chr2 82422514 82423461 -170833122 + L1PA7 LINE L1 5202 6146 -8 473 315 41 0 chr2 82423466 82423733 -170832850 + L1MCa LINE L1 3750 4027 -2537 435 271 121 5 chr2 82423793 82424000 -170832583 - MER5C DNA MER1_type -93 231 1 299 214 10 71 chr2 82424415 82424513 -170832070 - MER53 DNA DNA -4 185 94 309 291 58 26 chr2 82424723 82424912 -170831671 - L1M4 LINE L1 -2505 3641 3447 1948 148 23 3 chr2 82424951 82425256 -170831327 + AluSx SINE Alu 1 311 -1 1969 160 0 3 chr2 82427030 82427336 -170829247 - AluJb SINE Alu -7 305 1 678 287 131 42 chr2 82427461 82427911 -170828672 - MLT1L LTR MaLR -5 610 121 232 247 101 11 chr2 82429855 82429944 -170826639 + MER103 DNA DNA 3 99 -67 601 241 72 17 chr2 82430112 82430348 -170826235 - MER112 DNA MER1_type -4 252 4 2106 242 76 38 chr2 82431263 82431967 -170824616 - L1ME1 LINE L1 -6 6160 5484 1496 155 4 11 chr2 82431967 82432231 -170824352 + L1PA15 LINE L1 5899 6160 -5 2106 242 76 38 chr2 82432231 82432785 -170823798 - L1ME1 LINE L1 -682 5484 4830 1720 190 0 0 chr2 82432785 82433080 -170823503 + AluJb SINE Alu 3 297 -15 2106 242 76 38 chr2 82433080 82433361 -170823222 - L1ME1 LINE L1 -1336 4830 4561 * 10457 186 31 11 chr2 82433358 82435407 -170821176 + L1MA2 LINE L1 13 2103 -5462 4850 147 14 19 chr2 82435400 82436536 -170820047 + L1MA2 LINE L1 2785 3911 -3654 * 7266 180 7 53 chr2 82436534 82438042 -170818541 + L1MA2 LINE L1 5068 6484 -1081 2043 136 0 0 chr2 82438042 82438329 -170818254 - AluSx SINE Alu -5 307 21 7266 180 7 53 chr2 82438329 82438599 -170817984 + L1MA2 LINE L1 6484 6765 -800 4101 102 38 5 chr2 82438599 82439251 -170817332 + L1MA2 LINE L1 7048 7723 0 1552 252 57 29 chr2 82439298 82439878 -170816705 + L1MC4a LINE L1 6190 6785 -1023 637 12 24 0 chr2 82439926 82440008 -170816575 + (TAGA)n Simple_repeat Simple_repeat 3 86 0 1543 186 39 59 chr2 82440011 82440560 -170816023 + MLT2A2 LTR ERVL 1 544 -10 806 29 9 0 chr2 82440561 82440666 -170815917 + (TAGA)n Simple_repeat Simple_repeat 2 107 0 2556 80 128 5 chr2 82440666 82441065 -170815518 + LTR7 LTR ERV1 1 448 -2 19165 90 21 19 chr2 82441067 82444045 -170812538 + HERVH LTR ERV1 1 2987 -4726 776 162 20 0 chr2 82444039 82444187 -170812396 + HERVH LTR ERV1 3140 3290 -4423 * 3201 109 4 6 chr2 82444177 82444680 -170811903 + HERVH LTR ERV1 3492 3993 -3720 4199 137 0 1 chr2 82444682 82445345 -170811238 + HERVH LTR ERV1 4488 5149 -2564 1318 124 18 5 chr2 82445346 82445563 -170811020 + HERVH LTR ERV1 5600 5819 -1894 2241 101 48 13 chr2 82445563 82445940 -170810643 + HERVH LTR ERV1 7324 7713 0 2362 100 128 5 chr2 82445940 82446339 -170810244 + LTR7 LTR ERV1 1 448 -2 477 0 0 0 chr2 82446340 82446393 -170810190 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 2943 216 87 18 chr2 82446407 82447262 -170809321 + L1MC4a LINE L1 6844 7757 -51 2484 253 32 22 chr2 82447307 82448218 -170808365 - L1M4 LINE L1 -1296 4850 3931 1280 270 49 19 chr2 82448246 82448782 -170807801 + L1MD2 LINE L1 5686 6228 -131 346 394 78 3 chr2 82448854 82449176 -170807407 + L2 LINE L2 1705 2050 -1264 957 216 4 56 chr2 82449806 82450037 -170806546 + MER20 DNA MER1_type 1 219 0 385 267 100 0 chr2 82450209 82450329 -170806254 - MIR SINE MIR -54 208 77 1638 253 22 65 chr2 82451612 82452213 -170804370 + MLT1E LTR MaLR 14 588 -5 544 221 183 0 chr2 82452998 82453129 -170803454 + MER5A DNA MER1_type 35 189 0 1864 163 127 18 chr2 82453221 82453607 -170802976 + MSTA LTR MaLR 1 428 0 1758 145 84 57 chr2 82454881 82455287 -170801296 + MSTB LTR MaLR 8 424 -2 609 238 106 0 chr2 82456171 82456331 -170800252 - MIR SINE MIR 0 262 86 2048 199 48 2 chr2 82456344 82456756 -170799827 + MSTB1 LTR MaLR 1 431 -1 1019 269 225 43 chr2 82456848 82457825 -170798758 - L2 LINE L2 -141 3172 2014 259 221 135 19 chr2 82457879 82457962 -170798621 + MIR SINE MIR 104 203 -59 1050 259 91 34 chr2 82457962 82458436 -170798147 + MLT1D LTR MaLR 5 505 0 259 221 135 19 chr2 82458436 82458456 -170798127 + MIR SINE MIR 203 219 -43 352 172 0 0 chr2 82458740 82458804 -170797779 + LTR1B-int LTR ERV1 6540 6603 -488 * 1865 165 23 8 chr2 82458800 82459152 -170797431 + LTR1B-int LTR ERV1 6734 7090 -1 1867 192 133 77 chr2 82459154 82459936 -170796647 + LTR1B LTR ERV1 1 826 0 633 282 19 38 chr2 82460706 82460915 -170795668 - MIR SINE MIR -29 233 29 283 318 103 51 chr2 82462365 82462560 -170794023 - MIR SINE MIR -49 213 9 962 240 184 3 chr2 82463637 82463958 -170792625 + MSTD LTR MaLR 17 395 -1 22 35 0 0 chr2 82464367 82464396 -170792187 + AT_rich Low_complexity Low_complexity 1 29 0 379 261 64 19 chr2 82464562 82464719 -170791864 + L1M4 LINE L1 3326 3489 -2657 298 307 20 0 chr2 82465036 82465137 -170791446 - MLT1F1 LTR MaLR -396 171 69 1659 216 14 48 chr2 82465195 82465695 -170790888 - L1M4 LINE L1 -423 5761 5279 740 238 6 77 chr2 82465754 82466077 -170790506 - L1M4 LINE L1 -875 5271 4972 839 115 0 0 chr2 82466097 82466210 -170790373 + AluSp SINE Alu 1 113 -200 1182 259 58 29 chr2 82466211 82466763 -170789820 - L1M4 LINE L1 -1246 4900 4333 548 294 52 0 chr2 82466752 82467000 -170789583 - L1M4 LINE L1 -3412 2734 2474 * 28963 108 6 13 chr2 82467006 82472789 -170783794 - L1PA7 LINE L1 -1 6468 703 326 237 10 0 chr2 82472810 82472907 -170783676 - L1M4 LINE L1 -3714 2432 2335 432 254 17 17 chr2 82473127 82473304 -170783279 - MER41B LTR ERV1 -205 430 254 407 215 65 65 chr2 82473481 82473681 -170782902 - L1M4 LINE L1 -3819 2327 2128 427 227 9 0 chr2 82473684 82473794 -170782789 + MLT1B LTR MaLR 1 111 -279 1937 118 36 74 chr2 82477738 82478128 -170778455 - THE1C LTR MaLR 0 375 1 26 30 0 0 chr2 82478506 82478539 -170778044 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr2 82478634 82478655 -170777928 + AT_rich Low_complexity Low_complexity 1 21 0 1944 138 4 17 chr2 82478723 82479292 -170777291 - LTR10E LTR ERV1 -21 612 1 1671 171 4 0 chr2 82479620 82479895 -170776688 - AluJo SINE Alu -25 287 12 25 31 0 0 chr2 82479906 82479938 -170776645 + AT_rich Low_complexity Low_complexity 1 32 0 618 321 21 13 chr2 82480786 82481023 -170775560 - MIR SINE MIR -7 255 17 2969 90 31 5 chr2 82481299 82481687 -170774896 - MER48 LTR ERV1 0 398 1 39243 110 20 11 chr2 82481687 82485695 -170770888 - HERVH48 LTR ERV1 0 6654 2482 2546 67 0 6 chr2 82485695 82486008 -170770575 + AluY SINE Alu 1 311 0 39243 110 20 11 chr2 82486008 82488514 -170768069 - HERVH48 LTR ERV1 -4172 2482 1 2838 114 31 3 chr2 82488514 82488901 -170767682 - MER48 LTR ERV1 0 398 1 587 219 0 0 chr2 82488901 82489006 -170767577 - MSTC LTR MaLR -323 105 1 1895 223 81 33 chr2 82489006 82489490 -170767093 - MSTD-int LTR MaLR 0 1735 1229 2621 255 37 55 chr2 82489783 82490809 -170765774 - MSTD-int LTR MaLR -642 1093 1 781 250 58 17 chr2 82490809 82491135 -170765448 - MSTD LTR MaLR 0 396 16 2356 79 0 0 chr2 82491478 82491769 -170764814 + AluY SINE Alu 1 291 -20 484 232 26 39 chr2 82491892 82492047 -170764536 - MSTC LTR MaLR -1 395 243 23 54 0 0 chr2 82492092 82492129 -170764454 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr2 82492383 82492411 -170764172 + AT_rich Low_complexity Low_complexity 1 28 0 498 271 27 77 chr2 82493308 82493464 -170763119 - MIR SINE MIR -32 230 87 1831 151 4 0 chr2 82493464 82493742 -170762841 + L1PA15 LINE L1 5881 6159 -6 498 271 27 77 chr2 82493742 82493806 -170762777 - MIR SINE MIR -175 87 21 267 103 0 0 chr2 82494024 82494063 -170762520 + (TG)n Simple_repeat Simple_repeat 1 39 0 571 243 0 0 chr2 82494088 82494199 -170762384 - MSTC LTR MaLR -317 111 1 2324 255 98 28 chr2 82494201 82494944 -170761639 - MSTD-int LTR MaLR -8 1727 882 43362 35 22 1 chr2 82494960 82500963 -170755620 - L1PA3 LINE L1 0 6155 22 3004 251 13 25 chr2 82501100 82501380 -170755203 - MSTD-int LTR MaLR -953 782 500 1049 105 0 14 chr2 82501380 82501523 -170755060 - L1PA11 LINE L1 -2 6172 6032 3004 251 13 25 chr2 82501523 82502034 -170754549 - MSTD-int LTR MaLR -1235 500 1 714 289 80 16 chr2 82502051 82502372 -170754211 - MSTD LTR MaLR -7 381 13 388 232 0 95 chr2 82503446 82503573 -170753010 + MIR SINE MIR 4 117 -92 324 0 0 0 chr2 82503580 82503616 -170752967 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 1847 110 55 0 chr2 82503642 82503896 -170752687 - AluSc SINE Alu -14 295 28 2156 190 19 0 chr2 82505007 82505422 -170751161 - L1MA5 LINE L1 -6 6294 5872 466 312 55 14 chr2 82505785 82506003 -170750580 + MIR SINE MIR 29 255 -7 2238 128 0 0 chr2 82506010 82506314 -170750269 + AluSx SINE Alu 1 304 -8 3860 78 2 0 chr2 82507164 82507650 -170748933 + L1PA13 LINE L1 5669 6155 -8 2205 85 0 67 chr2 82507654 82507983 -170748600 + AluY SINE Alu 5 311 0 1661 169 60 3 chr2 82508298 82508454 -170748129 - AluJb SINE Alu -12 300 154 513 0 0 0 chr2 82508454 82508511 -170748072 + (TA)n Simple_repeat Simple_repeat 2 58 0 1661 169 60 3 chr2 82508511 82508638 -170747945 - AluJb SINE Alu -158 154 1 21 89 0 0 chr2 82508727 82508783 -170747800 + AT_rich Low_complexity Low_complexity 1 56 0 6644 163 22 12 chr2 82512884 82514081 -170742502 - Tigger1 DNA MER2_type -2 2416 1209 4433 159 127 11 chr2 82514073 82514914 -170741669 - Tigger1 DNA MER2_type -1454 964 26 * 507 234 0 0 chr2 82515217 82515328 -170741255 - MLT1B LTR MaLR -279 111 1 272 231 14 105 chr2 82515332 82515475 -170741108 + L1M4 LINE L1 2129 2258 -3888 2033 254 35 32 chr2 82515483 82516200 -170740383 - L1M4 LINE L1 -1095 5051 4333 1226 298 15 29 chr2 82516188 82516699 -170739884 - L1M4 LINE L1 -3411 2735 2257 * 1957 183 15 82 chr2 82516699 82517069 -170739514 - LTR47B LTR ERVL 0 443 110 1794 159 3 23 chr2 82517069 82517378 -170739205 + AluJb SINE Alu 1 303 -9 1957 183 15 82 chr2 82517378 82517482 -170739101 - LTR47B LTR ERVL -333 110 1 243 143 39 26 chr2 82517850 82517927 -170738656 + (TAA)n Simple_repeat Simple_repeat 3 80 0 6050 202 63 33 chr2 82517989 82519442 -170737141 - MER4B-int LTR ERV1 -2038 4720 3225 365 342 69 46 chr2 82519456 82520434 -170736149 - LTR47B-int LTR ERVL -1243 4100 3192 896 306 77 47 chr2 82520720 82521545 -170735038 - LTR47B-int LTR ERVL -1116 2302 1926 180 0 0 0 chr2 82522263 82522283 -170734300 + (T)n Simple_repeat Simple_repeat 1 20 0 31 0 0 0 chr2 82522443 82522474 -170734109 + AT_rich Low_complexity Low_complexity 1 31 0 301 342 34 7 chr2 82523360 82523509 -170733074 - LTR47B-int LTR ERVL -5152 191 39 1962 202 15 54 chr2 82523556 82524017 -170732566 - LTR47B LTR ERVL 0 443 1 533 175 10 0 chr2 82524154 82524251 -170732332 + MLT1B LTR MaLR 1 98 -292 231 36 0 0 chr2 82528206 82528234 -170728349 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1265 208 78 79 chr2 82528852 82529323 -170727260 - MLT1E2 LTR MaLR -195 459 1 2376 54 58 0 chr2 82529708 82530002 -170726581 - AluY SINE Alu 0 311 1 606 232 0 0 chr2 82530044 82530156 -170726427 + Tigger3(Golem) DNA MER2_type 2918 3029 0 2242 120 3 0 chr2 82530522 82530831 -170725752 + AluSg SINE Alu 1 310 0 1582 168 83 148 chr2 82530885 82531334 -170725249 - LTR40a LTR ERVL 0 519 111 2241 82 45 0 chr2 82531334 82531625 -170724958 + AluSg SINE Alu 1 304 -6 1582 168 83 148 chr2 82531625 82531729 -170724854 - LTR40a LTR ERVL -408 111 2 10096 185 41 41 chr2 82532441 82532711 -170723872 - L1MA9 LINE L1 -374 7357 7089 2187 67 0 0 chr2 82532711 82532979 -170723604 - AluY SINE Alu -17 294 27 10096 185 41 41 chr2 82532979 82534660 -170721923 - L1MA9 LINE L1 -642 7089 5408 2090 124 3 0 chr2 82534660 82534950 -170721633 - AluSq SINE Alu -22 291 1 10096 185 41 41 chr2 82534950 82536039 -170720544 - L1MA9 LINE L1 -2323 5408 4321 2550 124 42 137 chr2 82536028 82536648 -170719935 - L1PB3 LINE L1 -1 6153 5593 * 2834 264 50 23 chr2 82536627 82538055 -170718528 - L1MA9 LINE L1 -3226 4339 2847 180 0 0 0 chr2 82538055 82538075 -170718508 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 2834 264 50 23 chr2 82538075 82538344 -170718239 - L1MA9 LINE L1 -4718 2847 2587 16370 219 34 15 chr2 82538359 82541167 -170715416 - L1PA15 LINE L1 0 6816 4065 237 65 0 0 chr2 82541167 82541198 -170715385 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 16370 219 34 15 chr2 82541198 82543538 -170713045 - L1PA15 LINE L1 -2751 4065 1569 333 0 0 0 chr2 82543538 82543575 -170713008 + (TG)n Simple_repeat Simple_repeat 2 38 0 16370 219 34 15 chr2 82543575 82543940 -170712643 - L1PA15 LINE L1 -5247 1569 1213 3728 240 204 15 chr2 82543944 82545947 -170710636 - L1M3c LINE L1 -4573 2464 1 1550 199 0 17 chr2 82549769 82550060 -170706523 + AluJo SINE Alu 1 286 -26 1028 155 56 19 chr2 82550581 82550820 -170705763 + L1MA4 LINE L1 5937 6156 -144 201 121 42 61 chr2 82552166 82552331 -170704252 + (TAA)n Simple_repeat Simple_repeat 1 162 0 30 27 0 0 chr2 82552393 82552430 -170704153 + AT_rich Low_complexity Low_complexity 1 37 0 2753 49 3 0 chr2 82552430 82552755 -170703828 - LTR17 LTR ERV1 -454 326 1 2448 55 0 3 chr2 82552755 82553048 -170703535 - HERV17 LTR ERV1 0 8626 8335 277 51 0 0 chr2 82553038 82553077 -170703506 - HERV17 LTR ERV1 -1078 7548 7510 * 43932 61 5 6 chr2 82553070 82558491 -170698092 - HERV17 LTR ERV1 -2607 6019 605 417 121 15 0 chr2 82559978 82560044 -170696539 - MLT2A2 LTR ERVL -8 445 379 796 97 9 0 chr2 82560149 82560262 -170696321 + L1MA5A LINE L1 6181 6294 -3 495 300 119 22 chr2 82560357 82560808 -170695775 + L1ME4a LINE L1 5258 5756 -558 1986 194 100 18 chr2 82560877 82561303 -170695280 - L1MA8 LINE L1 0 6291 5817 2335 73 0 16 chr2 82561303 82561606 -170694977 - AluY SINE Alu -13 298 1 1986 194 100 18 chr2 82561606 82561679 -170694904 - L1MA8 LINE L1 -474 5817 5751 188 61 61 0 chr2 82561819 82561852 -170694731 + (TAGA)n Simple_repeat Simple_repeat 1 35 0 243 0 0 0 chr2 82562309 82562336 -170694247 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 385 264 0 22 chr2 82562879 82562970 -170693613 + L2 LINE L2 3198 3286 -27 288 154 0 0 chr2 82563978 82564030 -170692553 + A-rich Low_complexity Low_complexity 1 52 0 297 172 0 0 chr2 82564469 82564533 -170692050 + (CA)n Simple_repeat Simple_repeat 1 64 0 23 0 0 0 chr2 82565640 82565663 -170690920 + AT_rich Low_complexity Low_complexity 1 23 0 187 265 31 61 chr2 82565855 82565953 -170690630 - L2 LINE L2 0 3313 3219 301 236 80 70 chr2 82566109 82566308 -170690275 + L1ME4a LINE L1 5769 5969 -152 1668 226 44 88 chr2 82567460 82568003 -170688580 - LTR40a LTR ERVL 0 519 1 6350 34 0 0 chr2 82568255 82568967 -170687616 + L1PA4 LINE L1 5440 6151 -4 201 39 0 0 chr2 82568982 82569008 -170687575 + (CAAAAA)n Simple_repeat Simple_repeat 2 27 0 276 351 144 15 chr2 82570067 82570269 -170686314 - MIR SINE MIR -15 247 20 228 67 0 0 chr2 82571274 82571304 -170685279 + (CTG)n Simple_repeat Simple_repeat 1 30 0 502 291 57 38 chr2 82571513 82571723 -170684860 + MIR SINE MIR 28 241 -21 195 281 91 83 chr2 82573322 82573443 -170683140 + MER5B DNA MER1_type 57 178 0 207 341 12 12 chr2 82573589 82573674 -170682909 + MER5A DNA MER1_type 34 118 -71 332 282 64 27 chr2 82573677 82573787 -170682796 + MER81 DNA DNA 1 114 0 327 318 9 19 chr2 82575056 82575163 -170681420 + MIR SINE MIR 31 136 -72 219 69 0 0 chr2 82576530 82576559 -170680024 + (CAA)n Simple_repeat Simple_repeat 2 30 0 479 261 26 39 chr2 82577402 82577555 -170679028 - MIR SINE MIR 0 262 112 292 257 115 35 chr2 82577558 82577671 -170678912 + MIR SINE MIR 125 246 -16 868 252 154 24 chr2 82577759 82578104 -170678479 + L2 LINE L2 2597 3052 -261 1661 178 20 94 chr2 82578104 82578508 -170678075 - MLT1A2 LTR MaLR 0 374 1 868 252 154 24 chr2 82578508 82578637 -170677946 + L2 LINE L2 3052 3163 -150 1649 161 31 47 chr2 82579798 82580115 -170676468 - AluJo SINE Alu 0 312 1 2214 114 7 7 chr2 82580155 82580461 -170676122 - AluSx SINE Alu -6 306 1 211 301 60 0 chr2 82581923 82582006 -170674577 - MIR SINE MIR -13 249 162 1350 249 40 11 chr2 82582026 82582375 -170674208 + MLT1A2 LTR MaLR 4 362 -12 342 288 63 9 chr2 82582384 82582495 -170674088 - MIR SINE MIR -145 117 1 854 286 115 27 chr2 82582521 82582895 -170673688 - MLT1I LTR MaLR -2 407 1 565 133 29 0 chr2 82583041 82583146 -170673437 + L1MA8 LINE L1 6180 6287 -4 3157 91 16 9 chr2 82583421 82583862 -170672721 + MLT2A1 LTR ERVL 1 444 0 571 173 39 8 chr2 82585340 82585467 -170671116 - Charlie1 DNA MER1_type -2 2759 2629 376 242 258 6 chr2 82585457 82585639 -170670944 - Charlie1 DNA MER1_type -2521 240 13 * 202 312 167 29 chr2 82585671 82585809 -170670774 + MIR3 SINE MIR 29 185 -23 477 252 17 34 chr2 82586591 82586710 -170669873 + MIR SINE MIR 30 146 -62 2240 126 0 0 chr2 82586956 82587265 -170669318 + AluSq SINE Alu 1 309 -4 617 281 49 49 chr2 82587650 82588112 -170668471 - L1M4c LINE L1 -4712 1670 1092 1710 201 10 7 chr2 82588112 82588411 -170668172 - AluJo SINE Alu -12 300 1 617 281 49 49 chr2 82588411 82588535 -170668048 - L1M4c LINE L1 -5290 1092 969 3773 201 22 19 chr2 82588974 82590009 -170666574 + L1MB5 LINE L1 5123 6159 -15 2087 205 7 0 chr2 82590007 82590441 -170666142 + L1 LINE L1 4431 4867 -1279 * 814 347 57 11 chr2 82590472 82590824 -170665759 + L1PB4 LINE L1 53 420 -6419 * 4878 239 90 12 chr2 82590819 82592302 -170664281 + L1PB4 LINE L1 1890 3723 -3126 2210 119 96 10 chr2 82592302 82592696 -170663887 + MSTA LTR MaLR 1 428 0 4878 239 90 12 chr2 82592696 82593236 -170663347 + L1PB4 LINE L1 3723 4220 -2629 4353 163 32 8 chr2 82593233 82594023 -170662560 + L1PA16 LINE L1 5352 6160 -6 * 5074 175 10 15 chr2 82594033 82595331 -170661252 + L1PB4 LINE L1 5579 7001 -5 1744 52 5 0 chr2 82595356 82595566 -170661017 - AluY SINE Alu -4 307 97 201 330 180 10 chr2 82595980 82596080 -170660503 - MER5A DNA MER1_type -1 188 72 293 348 59 0 chr2 82597105 82597223 -170659360 + MIR SINE MIR 67 191 -71 710 300 36 4 chr2 82597942 82598189 -170658394 - MIR SINE MIR 0 262 8 24 53 0 0 chr2 82598324 82598362 -170658221 + AT_rich Low_complexity Low_complexity 1 38 0 756 211 23 12 chr2 82598362 82598533 -170658050 - L1PA16 LINE L1 -20 6146 5974 1759 137 7 27 chr2 82599451 82599744 -170656839 + AluSq SINE Alu 1 287 -26 284 81 81 0 chr2 82600559 82600646 -170655937 + (TA)n Simple_repeat Simple_repeat 1 94 0 222 311 14 14 chr2 82600646 82600720 -170655863 - MIR SINE MIR -125 137 64 324 0 0 0 chr2 82601691 82601727 -170654856 + (TAA)n Simple_repeat Simple_repeat 2 37 0 412 260 135 14 chr2 82602186 82602482 -170654101 - L1ME4a LINE L1 -227 5894 5563 458 328 16 11 chr2 82603000 82603189 -170653394 - MER117 DNA MER1_type -7 190 1 316 375 0 49 chr2 82603383 82603456 -170653127 - MIR SINE MIR -117 145 81 1583 272 67 12 chr2 82603456 82603948 -170652635 - LTR40a LTR ERVL 0 519 1 316 375 0 49 chr2 82603948 82604018 -170652565 - MIR SINE MIR -181 81 9 433 292 125 28 chr2 82604252 82604468 -170652115 + MIR SINE MIR 11 247 -15 2400 55 10 10 chr2 82604587 82604898 -170651685 - AluY SINE Alu 0 311 1 330 340 60 25 chr2 82605283 82605483 -170651100 - L3 LINE CR1 -342 1235 1029 374 330 9 0 chr2 82605734 82605843 -170650740 + MIR SINE MIR 34 143 -119 849 335 156 29 chr2 82606084 82606803 -170649780 + L2 LINE L2 1912 2781 -533 708 54 0 0 chr2 82606803 82606896 -170649687 + (GAA)n Simple_repeat Simple_repeat 1 93 0 849 335 156 29 chr2 82606896 82607121 -170649462 + L2 LINE L2 2781 2976 -338 2199 105 7 7 chr2 82607189 82607483 -170649100 - AluSx SINE Alu -18 294 1 472 261 98 33 chr2 82607585 82607769 -170648814 + L2 LINE L2 3118 3313 0 268 317 0 12 chr2 82607777 82607859 -170648724 - MIR SINE MIR -116 146 66 571 112 82 0 chr2 82607867 82607965 -170648618 - L1PA16 LINE L1 -4 6162 6057 635 145 23 23 chr2 82607981 82608112 -170648471 - L1P LINE L1 -760 5406 5276 260 306 45 9 chr2 82608359 82608470 -170648113 - LTR67 LTR ERVL -13 544 430 267 313 118 72 chr2 82609997 82610192 -170646391 + MIR3 SINE MIR 1 204 -4 206 250 14 0 chr2 82610781 82610853 -170645730 + CT-rich Low_complexity Low_complexity 2 74 0 309 317 30 10 chr2 82611106 82611207 -170645376 + MIR SINE MIR 32 134 -128 1696 146 7 0 chr2 82611215 82611503 -170645080 + L1MA5 LINE L1 6009 6298 -2 228 59 29 0 chr2 82611526 82611560 -170645023 + L1M LINE L1 5361 5395 -896 2620 96 8 11 chr2 82614533 82614898 -170641685 - THE1B LTR MaLR 0 364 1 1662 232 54 22 chr2 82616270 82616718 -170639865 + MLT1C LTR MaLR 6 467 0 192 135 0 0 chr2 82616830 82616867 -170639716 + (CAT)n Simple_repeat Simple_repeat 3 39 0 228 350 80 0 chr2 82616938 82617038 -170639545 - MIR SINE MIR -115 147 40 187 347 82 14 chr2 82618373 82618520 -170638063 - MIR SINE MIR -94 168 12 208 200 40 0 chr2 82619317 82619367 -170637216 + (TGAA)n Simple_repeat Simple_repeat 3 54 0 255 57 0 57 chr2 82620680 82620733 -170635850 + (TG)n Simple_repeat Simple_repeat 1 50 0 22 0 0 0 chr2 82620880 82620902 -170635681 + AT_rich Low_complexity Low_complexity 1 22 0 2019 159 78 50 chr2 82620907 82621329 -170635254 + MER74C LTR ERVL 15 448 -12 361 301 95 82 chr2 82621383 82621771 -170634812 - MLT1L LTR MaLR -49 566 174 208 111 44 0 chr2 82621873 82621918 -170634665 + T-rich Low_complexity Low_complexity 1 47 0 267 286 5 0 chr2 82622015 82622087 -170634496 + MIR SINE MIR 64 138 -70 261 280 84 19 chr2 82622599 82622706 -170633877 + MIR SINE MIR 31 144 -64 294 167 0 0 chr2 82623592 82623652 -170632931 + (TG)n Simple_repeat Simple_repeat 1 60 0 489 264 113 59 chr2 82624142 82624381 -170632202 + MIR SINE MIR 11 262 0 216 0 0 0 chr2 82625161 82625185 -170631398 + (A)n Simple_repeat Simple_repeat 1 24 0 248 195 244 24 chr2 82626049 82626131 -170630452 + MLT1J2 LTR MaLR 62 161 -289 248 194 167 37 chr2 82626144 82626252 -170630331 + MLT1J2 LTR MaLR 204 325 -125 974 224 39 0 chr2 82626589 82626794 -170629789 - MER58A DNA MER1_type -1 223 11 219 211 39 0 chr2 82627221 82627273 -170629310 + (TATG)n Simple_repeat Simple_repeat 2 55 0 5210 219 56 16 chr2 82628013 82629499 -170627084 + L1MB8 LINE L1 3625 5195 -951 2930 220 18 22 chr2 82629501 82630218 -170626365 + L1MB8 LINE L1 5464 6177 -1 216 305 0 0 chr2 82630312 82630371 -170626212 + GA-rich Low_complexity Low_complexity 2 60 0 717 289 93 9 chr2 82631860 82632085 -170624498 + MIR SINE MIR 17 260 -2 271 267 33 0 chr2 82632938 82632998 -170623585 + L2 LINE L2 3252 3313 0 1522 177 39 58 chr2 82633237 82633547 -170623036 + AluJo SINE Alu 1 304 -8 2607 36 0 0 chr2 82634015 82634318 -170622265 - AluY SINE Alu -8 303 1 925 322 89 25 chr2 82634983 82635592 -170620991 + L1 LINE L1 3875 4522 -1624 2071 164 41 59 chr2 82635607 82636118 -170620465 + LTR54 LTR ERV1 8 509 -1 272 339 75 3 chr2 82636119 82636411 -170620172 + L1 LINE L1 4532 4844 -1302 311 314 94 21 chr2 82636487 82636678 -170619905 + L1 LINE L1 4933 5137 -1009 4007 134 26 20 chr2 82636712 82637100 -170619483 + L1MA5A LINE L1 4924 5308 -989 2032 138 0 3 chr2 82637100 82637398 -170619185 + AluSq SINE Alu 1 297 -16 4007 134 26 20 chr2 82637398 82638011 -170618572 + L1MA5A LINE L1 5308 5946 -351 362 253 46 0 chr2 82638120 82638207 -170618376 + L1MC4 LINE L1 6613 6703 -1339 331 284 23 0 chr2 82638129 82638217 -170618366 - L1MC4 LINE L1 -1339 6703 6614 * 180 179 0 0 chr2 82638260 82638299 -170618284 + (TG)n Simple_repeat Simple_repeat 2 40 0 4424 186 8 38 chr2 82639216 82640132 -170616451 - MER54A LTR ERVL 0 901 14 436 277 26 56 chr2 82640520 82640715 -170615868 + MIR SINE MIR 74 262 0 192 303 22 45 chr2 82640717 82640806 -170615777 + MIR SINE MIR 170 256 -6 1953 133 0 14 chr2 82641374 82641706 -170614877 - AluSx SINE Alu 0 328 1 401 362 43 20 chr2 82642558 82642812 -170613771 - L2 LINE L2 -475 2839 2580 1183 169 59 62 chr2 82643126 82643446 -170613137 + L1MC2 LINE L1 5783 6101 -243 857 144 72 0 chr2 82643449 82643616 -170612967 + L1MC2 LINE L1 6158 6336 -8 321 331 87 36 chr2 82644659 82644994 -170611589 - L2 LINE L2 -917 2397 2046 2040 189 36 10 chr2 82645059 82645471 -170611112 + MSTB LTR MaLR 4 426 0 1342 135 0 14 chr2 82648430 82648652 -170607931 - LTR1 LTR ERV1 0 785 567 429 255 0 0 chr2 82648906 82649004 -170607579 + MER96 DNA MER1_type? 1 98 -77 433 331 50 0 chr2 82649055 82649215 -170607368 - MIR SINE MIR -87 175 8 1935 131 52 0 chr2 82649288 82649579 -170607004 - AluSg SINE Alu -4 306 1 189 0 0 0 chr2 82649752 82649773 -170606810 + (CAAAA)n Simple_repeat Simple_repeat 3 23 0 443 302 41 41 chr2 82650191 82650446 -170606137 + MLT1G3 LTR MaLR 7 296 -294 254 125 21 0 chr2 82650446 82650494 -170606089 + GA-rich Low_complexity Low_complexity 2 50 0 324 251 110 48 chr2 82650520 82650747 -170605836 + MLT1G3 LTR MaLR 302 542 0 40860 36 23 0 chr2 82650787 82656801 -170599782 + L1PA3 LINE L1 4 6155 0 197 286 29 0 chr2 82656866 82656936 -170599647 + MIR SINE MIR 70 141 -121 384 22 0 0 chr2 82658355 82658400 -170598183 + (TC)n Simple_repeat Simple_repeat 2 46 0 297 0 0 0 chr2 82658401 82658434 -170598149 + (CA)n Simple_repeat Simple_repeat 2 34 0 419 293 140 7 chr2 82661323 82661473 -170595110 + MIR SINE MIR 20 189 -73 208 308 0 0 chr2 82662076 82662128 -170594455 + (TG)n Simple_repeat Simple_repeat 1 52 0 510 304 38 61 chr2 82662430 82662775 -170593808 + L1M4 LINE L1 2254 2590 -3556 695 305 114 41 chr2 82662877 82663316 -170593267 + L2 LINE L2 2842 3312 -1 25 51 0 0 chr2 82663410 82663449 -170593134 + AT_rich Low_complexity Low_complexity 1 39 0 428 290 42 42 chr2 82664271 82664464 -170592119 + L1ME4a LINE L1 5751 5943 -178 215 263 32 84 chr2 82664743 82664838 -170591745 + MIR SINE MIR 63 152 -56 3486 113 4 6 chr2 82665220 82665734 -170590849 - MER75 DNA T2_type 0 514 2 408 252 61 9 chr2 82665761 82665876 -170590707 + MIR SINE MIR 110 230 -32 193 311 94 38 chr2 82666433 82666539 -170590044 + L2 LINE L2 3184 3295 -18 324 302 9 26 chr2 82666897 82667013 -170589570 + MIR SINE MIR 149 262 0 296 176 29 0 chr2 82668822 82668890 -170587693 - L1MB7 LINE L1 -11 6173 6104 340 338 100 41 chr2 82669194 82669463 -170587120 - L2 LINE L2 -35 3237 2953 299 324 55 55 chr2 82669466 82669648 -170586935 - MER5A DNA MER1_type 0 189 8 1981 199 50 19 chr2 82670228 82670706 -170585877 - MER21B LTR ERV1 -11 852 360 864 348 43 25 chr2 82670707 82671377 -170585206 - HERV16 LTR ERVL -3429 1567 886 1930 177 3 0 chr2 82671482 82671827 -170584756 + MLT1A1 LTR MaLR 1 346 -19 1017 319 87 5 chr2 82672509 82672958 -170583625 - LTR16C LTR ERVL -2 489 4 247 386 124 13 chr2 82673029 82673327 -170583256 - L3 LINE CR1 -899 678 348 26 30 0 0 chr2 82674607 82674640 -170581943 + AT_rich Low_complexity Low_complexity 1 33 0 1022 207 81 29 chr2 82675140 82675461 -170581122 - MSTD LTR MaLR -8 388 20 2420 173 19 12 chr2 82675461 82675883 -170580700 - MSTB LTR MaLR -1 425 1 1022 207 81 29 chr2 82675883 82675905 -170580678 - MSTD LTR MaLR -376 20 1 22 35 0 0 chr2 82676025 82676054 -170580529 + AT_rich Low_complexity Low_complexity 1 29 0 315 151 0 0 chr2 82676058 82676111 -170580472 - AluJb SINE Alu -178 124 72 251 354 0 0 chr2 82676114 82676196 -170580387 + L2 LINE L2 3232 3313 0 969 218 5 0 chr2 82676291 82676479 -170580104 - MER5A DNA MER1_type 0 189 1 1250 199 67 67 chr2 82677234 82677606 -170578977 + MLT1B LTR MaLR 1 372 -18 238 333 77 43 chr2 82680772 82680979 -170575604 - MIR SINE MIR -46 216 3 1336 198 105 62 chr2 82681015 82681454 -170575129 + MLT1C LTR MaLR 4 461 -6 397 280 88 26 chr2 82682038 82682231 -170574352 - L1MC5 LINE L1 -25 7936 7732 435 273 100 49 chr2 82682295 82682550 -170574033 - MIR SINE MIR -1 261 1 222 235 20 0 chr2 82682760 82682811 -170573772 - L2 LINE L2 0 3272 3221 342 264 34 47 chr2 82683084 82683232 -170573351 - MIR SINE MIR -6 256 111 183 205 51 0 chr2 82684123 82684162 -170572421 + MER5B DNA MER1_type 7 47 -131 2636 129 51 10 chr2 82684544 82684955 -170571628 - MSTA LTR MaLR 0 428 1 370 339 83 37 chr2 82685117 82685359 -170571224 - L3 LINE CR1 -85 1492 1240 295 296 61 17 chr2 82686029 82686144 -170570439 - MIR3 SINE MIR -5 203 84 25 65 0 0 chr2 82686845 82686891 -170569692 + AT_rich Low_complexity Low_complexity 1 46 0 1482 242 112 30 chr2 82687311 82687833 -170568750 - MLT1F1 LTR MaLR -4 563 1 185 294 20 0 chr2 82688673 82688724 -170567859 - MIR SINE MIR -140 68 17 21 36 0 0 chr2 82688724 82688752 -170567831 + AT_rich Low_complexity Low_complexity 1 28 0 551 259 141 27 chr2 82689985 82690205 -170566378 - MIR SINE MIR -1 261 17 1309 167 39 23 chr2 82690652 82690957 -170565626 + MER33 DNA MER1_type 1 302 -22 1677 200 98 22 chr2 82691158 82691558 -170565025 - MLT1D LTR MaLR 0 505 76 424 284 116 47 chr2 82692947 82693137 -170563446 - MIR3 SINE MIR -5 203 1 1875 161 3 0 chr2 82693759 82694050 -170562533 - AluSx SINE Alu -20 292 1 2281 123 0 0 chr2 82694098 82694406 -170562177 - AluSq SINE Alu -5 308 1 350 328 17 0 chr2 82694455 82694571 -170562012 - L2 LINE L2 0 3313 3196 355 311 88 68 chr2 82695365 82695719 -170560864 + L2 LINE L2 2912 3272 0 324 0 0 0 chr2 82696189 82696225 -170560358 + (TG)n Simple_repeat Simple_repeat 2 37 0 225 0 0 0 chr2 82696224 82696249 -170560334 + (TA)n Simple_repeat Simple_repeat 2 26 0 * 1480 222 3 0 chr2 82696249 82696533 -170560050 - AluJo SINE Alu -27 285 1 2295 64 0 4 chr2 82697013 82697333 -170559250 + AluY SINE Alu 2 320 0 598 365 76 12 chr2 82697404 82697810 -170558773 - L3 LINE CR1 -46 1531 1100 185 380 66 0 chr2 82697923 82698060 -170558523 + MIR SINE MIR 116 261 -1 412 366 16 0 chr2 82698419 82698602 -170557981 - L3 LINE CR1 -947 630 445 2341 118 29 12 chr2 82698655 82699001 -170557582 + L1PA15 LINE L1 5814 6165 0 1978 119 88 0 chr2 82699011 82699296 -170557287 + AluSp SINE Alu 2 311 -2 3228 134 3 120 chr2 82699378 82699677 -170556906 - L1P LINE L1 -863 5283 5034 422 143 0 0 chr2 82699677 82699747 -170556836 - Alu SINE Alu -9 303 234 3228 134 3 120 chr2 82699747 82700078 -170556505 - L1P LINE L1 -1112 5034 4666 1375 109 11 0 chr2 82700078 82700260 -170556323 + L1PA10 LINE L1 5979 6164 -4 12666 156 22 19 chr2 82700609 82702783 -170553800 + Tigger1 DNA MER2_type 1 2181 -237 1378 217 7 7 chr2 82702787 82703064 -170553519 + AluJo SINE Alu 6 282 -30 10694 268 34 21 chr2 82703799 82707666 -170548917 + L1PA16 LINE L1 2182 6104 -1480 2424 132 3 25 chr2 82707681 82708044 -170548539 - THE1A LTR MaLR 0 355 1 11819 98 6 1 chr2 82708049 82709616 -170546967 - THE1A-int LTR MaLR -6 1574 1 2639 87 22 25 chr2 82709616 82709972 -170546611 - THE1A LTR MaLR 0 355 1 5245 176 20 11 chr2 82709973 82711453 -170545130 + L1PA16 LINE L1 6108 7595 -9 1520 127 37 4 chr2 82711459 82711703 -170544880 + Tigger1 DNA MER2_type 2167 2418 0 719 278 0 0 chr2 82712758 82712931 -170543652 - MIR SINE MIR 0 262 90 1602 255 26 37 chr2 82713856 82714393 -170542190 + L1ME2 LINE L1 5426 5956 -208 21 0 0 0 chr2 82714393 82714414 -170542169 + AT_rich Low_complexity Low_complexity 1 21 0 439 276 24 67 chr2 82714414 82714624 -170541959 + L1ME2 LINE L1 5949 6149 -15 236 216 14 27 chr2 82714787 82714861 -170541722 + L1MC5 LINE L1 7836 7908 -53 186 103 0 0 chr2 82715039 82715068 -170541515 + (CATATA)n Simple_repeat Simple_repeat 2 30 0 194 316 128 26 chr2 82715255 82715372 -170541211 + MER5A DNA MER1_type 16 144 -45 * 208 324 148 19 chr2 82715273 82715381 -170541202 - MER5A DNA MER1_type -22 167 46 1620 196 18 83 chr2 82715814 82716045 -170540538 - MLT1A1 LTR MaLR 0 365 167 1454 188 7 49 chr2 82716045 82716349 -170540234 - AluJo SINE Alu -21 291 1 1620 196 18 83 chr2 82716349 82716504 -170540079 - MLT1A1 LTR MaLR -198 167 4 278 280 27 0 chr2 82716506 82716581 -170540002 + GA-rich Low_complexity Low_complexity 3 79 0 239 311 0 0 chr2 82716890 82716951 -170539632 + Charlie8 DNA MER1_type 1 61 -2356 21 0 0 0 chr2 82717592 82717613 -170538970 + AT_rich Low_complexity Low_complexity 1 21 0 1468 180 26 26 chr2 82717767 82718073 -170538510 + AluJo SINE Alu 2 307 -5 315 203 0 0 chr2 82718993 82719062 -170537521 + (CATATA)n Simple_repeat Simple_repeat 2 70 0 917 186 16 6 chr2 82719697 82719880 -170536703 - MER3 DNA MER1_type -11 198 14 649 250 70 59 chr2 82719944 82720316 -170536267 + L1ME4a LINE L1 5708 6083 -38 957 138 0 0 chr2 82720733 82720863 -170535720 + FLAM_C SINE Alu 2 131 -2 351 0 0 0 chr2 82720864 82720903 -170535680 + (CA)n Simple_repeat Simple_repeat 2 40 0 222 306 105 48 chr2 82721249 82721373 -170535210 - L2 LINE L2 -1 3271 3141 463 222 32 0 chr2 82721376 82721502 -170535081 - L1MCb LINE L1 -5129 916 787 2772 73 128 5 chr2 82721507 82721906 -170534677 + LTR7 LTR ERV1 1 448 -2 19202 94 66 61 chr2 82721908 82725183 -170531400 + HERVH LTR ERV1 1 3290 -4423 7847 126 11 6 chr2 82725182 82726887 -170529696 + HERVH LTR ERV1 3500 5149 -2003 * 1483 116 19 0 chr2 82726888 82727104 -170529479 + HERVH LTR ERV1 5600 5819 -1894 1822 108 14 15 chr2 82727104 82727457 -170529126 + HERVH LTR ERV1 7324 7713 0 2948 78 92 5 chr2 82727457 82727869 -170528714 + LTR7 LTR ERV1 1 448 -2 274 256 26 26 chr2 82727872 82727950 -170528633 - L1MCb LINE L1 -5260 785 708 243 0 0 0 chr2 82729099 82729126 -170527457 + (CA)n Simple_repeat Simple_repeat 2 28 0 667 193 91 34 chr2 82729259 82729628 -170526955 - MER110 LTR ERV1 -23 468 1 844 200 55 34 chr2 82729634 82730001 -170526582 - LTR37A LTR ERV1 -2 424 6 33 0 0 0 chr2 82730014 82730047 -170526536 + AT_rich Low_complexity Low_complexity 1 33 0 911 134 0 15 chr2 82730047 82730181 -170526402 - FLAM_C SINE Alu -11 132 1 303 335 142 23 chr2 82730208 82730384 -170526199 - L3 LINE CR1 -1053 524 328 26 0 0 0 chr2 82730401 82730427 -170526156 + AT_rich Low_complexity Low_complexity 1 26 0 235 295 51 13 chr2 82730627 82730705 -170525878 - MIR SINE MIR -162 100 20 318 190 0 0 chr2 82730970 82731028 -170525555 - MER92C LTR ERV1 -2 552 495 483 306 12 24 chr2 82731114 82731284 -170525299 - MER92C LTR ERV1 -375 179 12 279 236 214 73 chr2 82732241 82732419 -170524164 - MLT1K LTR MaLR -8 580 378 185 231 96 0 chr2 82733314 82733366 -170523217 + MIR SINE MIR 88 144 -64 314 165 12 115 chr2 82733762 82733858 -170522725 - MLT1G LTR MaLR 0 595 420 518 295 113 62 chr2 82733885 82734218 -170522365 - MLT1G LTR MaLR -192 398 43 1032 218 15 111 chr2 82734218 82734622 -170521961 + MLT1A1 LTR MaLR 1 365 0 518 295 113 62 chr2 82734622 82734658 -170521925 - MLT1G LTR MaLR -547 43 10 501 304 12 19 chr2 82734964 82735125 -170521458 + MIR3 SINE MIR 48 207 -1 864 201 210 15 chr2 82735586 82735919 -170520664 + LTR37A LTR ERV1 27 424 -2 219 36 0 0 chr2 82736457 82736485 -170520098 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1002 166 0 0 chr2 82736725 82736882 -170519701 + FRAM SINE Alu 1 40 0 644 141 0 10 chr2 82736929 82737028 -170519555 + MER4A LTR ERV1 1 98 -566 2585 137 7 10 chr2 82737028 82737431 -170519152 + MER4A LTR ERV1 263 664 0 5311 136 176 75 chr2 82737434 82738813 -170517770 + MER4A-int LTR ERV1 1 1517 -5081 2030 108 4 0 chr2 82738813 82739090 -170517493 - AluSx SINE Alu -14 298 21 210 91 0 0 chr2 82739159 82739192 -170517391 + (TC)n Simple_repeat Simple_repeat 2 34 0 430 107 0 0 chr2 82739367 82739423 -170517160 + FLAM_A SINE Alu 22 77 -55 933 166 0 0 chr2 82739429 82739580 -170517003 + MLT1A2 LTR MaLR 219 369 -5 207 69 0 0 chr2 82739769 82739798 -170516785 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1324 188 120 10 chr2 82740020 82740403 -170516180 + LTR37A LTR ERV1 2 426 0 188 283 54 43 chr2 82740439 82740531 -170516052 + L2 LINE L2 3221 3313 0 224 349 12 0 chr2 82741051 82741137 -170515446 + MIR SINE MIR 74 160 -102 2145 125 0 0 chr2 82741140 82741444 -170515139 + AluSc SINE Alu 1 304 -5 906 180 22 5 chr2 82741640 82742051 -170514532 + MER89 LTR ERV1 5 559 0 632 175 72 64 chr2 82742636 82742887 -170513696 - LTR37A LTR ERV1 0 426 174 2209 97 10 0 chr2 82742980 82743278 -170513305 + AluSg SINE Alu 1 301 -9 362 274 21 0 chr2 82743743 82743838 -170512745 - LTR65 LTR ERV1 -6 663 567 667 195 16 0 chr2 82745263 82745391 -170511192 - MIR SINE MIR -21 241 112 1835 206 9 0 chr2 82745604 82745949 -170510634 - MER7A DNA MER2_type 0 346 1 26 0 0 0 chr2 82746346 82746372 -170510211 + AT_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr2 82746517 82746540 -170510043 + AT_rich Low_complexity Low_complexity 1 23 0 1769 249 62 65 chr2 82746922 82747646 -170508937 + MER72 LTR ERV1 1 722 0 436 206 130 0 chr2 82749070 82749216 -170507367 + L1M4 LINE L1 2876 3040 -3106 1073 206 44 60 chr2 82749225 82749585 -170506998 + MER67C LTR ERV1 12 403 -244 437 259 51 13 chr2 82749740 82749976 -170506607 + L1M4 LINE L1 3062 3306 -2840 341 336 17 25 chr2 82750156 82750275 -170506308 - L2 LINE L2 -4 3268 3151 250 302 160 30 chr2 82751165 82751496 -170505087 - HsTC2 DNA Tc2 -1008 890 517 231 242 50 67 chr2 82751508 82751628 -170504955 - HsTC2 DNA Tc2 -1597 301 184 367 135 338 0 chr2 82751761 82751835 -170504748 + AluSc SINE Alu 150 248 -51 867 117 0 0 chr2 82751835 82751977 -170504606 + AluSg/x SINE Alu 190 331 0 353 196 52 21 chr2 82755750 82755847 -170500736 - L1MC5 LINE L1 -32 7929 7830 293 145 16 0 chr2 82756837 82756899 -170499684 + CT-rich Low_complexity Low_complexity 2 64 0 189 74 0 0 chr2 82757150 82757177 -170499406 + (A)n Simple_repeat Simple_repeat 1 27 0 284 307 34 34 chr2 82757265 82757441 -170499142 + HAL1b LINE L1 352 527 -821 23 0 0 0 chr2 82757838 82757861 -170498722 + AT_rich Low_complexity Low_complexity 1 23 0 676 179 8 17 chr2 82757861 82757978 -170498605 + MER2 DNA MER2_type 2 117 -228 2296 77 0 39 chr2 82758089 82758400 -170498183 - AluY SINE Alu -12 299 1 408 208 28 0 chr2 82758400 82758472 -170498111 + MER2 DNA MER2_type 272 345 0 232 341 33 22 chr2 82758706 82758797 -170497786 - L2 LINE L2 -10 3262 3171 2326 139 53 17 chr2 82758816 82759233 -170497350 + MSTB1 LTR MaLR 1 432 0 1305 242 61 86 chr2 82759429 82759570 -170497013 - MLT1E2 LTR MaLR -1 625 482 2118 118 17 0 chr2 82759570 82759859 -170496724 + AluSc SINE Alu 1 294 -15 1305 242 61 86 chr2 82759859 82760380 -170496203 - MLT1E2 LTR MaLR -144 482 11 237 222 0 95 chr2 82761448 82761511 -170495072 + MIR3 SINE MIR 103 159 -49 239 177 16 0 chr2 82761707 82761769 -170494814 + (TA)n Simple_repeat Simple_repeat 2 64 0 210 71 0 0 chr2 82761776 82761804 -170494779 + (TG)n Simple_repeat Simple_repeat 2 29 0 392 259 102 10 chr2 82761882 82762079 -170494504 - L1MC4a LINE L1 -1797 6011 5797 1694 269 59 15 chr2 82762129 82762654 -170493929 + L1ME3A LINE L1 5618 6165 -5 1809 192 48 120 chr2 82762724 82763391 -170493192 - MLT1E2 LTR MaLR -7 619 1 552 235 83 34 chr2 82763421 82763625 -170492958 + MER46C DNA MER2_type 100 313 -25 876 257 44 87 chr2 82763649 82763994 -170492589 - L1MC4a LINE L1 -2021 5787 5464 387 84 56 14 chr2 82763994 82764065 -170492518 - L1MC2 LINE L1 -9 6335 6262 876 257 44 87 chr2 82764065 82764170 -170492413 - L1MC4a LINE L1 -2344 5464 5356 1725 130 7 30 chr2 82764174 82764443 -170492140 + AluSx SINE Alu 3 265 -47 210 224 0 41 chr2 82764445 82764494 -170492089 + A-rich Low_complexity Low_complexity 4 50 0 5509 171 12 11 chr2 82766252 82767411 -170489172 - L1MA4 LINE L1 -6 6294 5136 1225 194 16 0 chr2 82767877 82768130 -170488453 - L1MA4 LINE L1 -38 6262 6006 1107 263 39 9 chr2 82768143 82768474 -170488109 + MER58B DNA MER1_type 1 341 0 4134 73 10 0 chr2 82768849 82769369 -170487214 + LTR17 LTR ERV1 255 779 -1 6143 92 24 6 chr2 82769370 82770218 -170486365 + HERV17 LTR ERV1 1 863 -7763 288 0 0 0 chr2 82770218 82770250 -170486333 + (A)n Simple_repeat Simple_repeat 1 32 0 398 274 9 9 chr2 82770471 82770577 -170486006 - L2 LINE L2 0 3313 3208 25 0 0 0 chr2 82771300 82771325 -170485258 + AT_rich Low_complexity Low_complexity 1 25 0 522 291 50 30 chr2 82772958 82773157 -170483426 + MIR SINE MIR 60 262 0 324 363 52 0 chr2 82774255 82774390 -170482193 - MIR SINE MIR -16 246 105 23 78 0 0 chr2 82774592 82774643 -170481940 + AT_rich Low_complexity Low_complexity 1 51 0 678 343 95 0 chr2 82775001 82775328 -170481255 - MLT1I LTR MaLR -20 389 32 2971 159 77 32 chr2 82775823 82776447 -170480136 + LTR8A LTR ERV1 76 727 0 21 0 0 0 chr2 82777762 82777783 -170478800 + AT_rich Low_complexity Low_complexity 1 21 0 255 125 0 0 chr2 82777999 82778039 -170478544 + (A)n Simple_repeat Simple_repeat 1 40 0 2485 163 21 2 chr2 82778820 82779238 -170477345 - MSTB LTR MaLR 0 426 1 890 243 101 78 chr2 82779261 82779685 -170476898 - MLT1H LTR MaLR 0 549 116 351 0 0 0 chr2 82780307 82780346 -170476237 + (TA)n Simple_repeat Simple_repeat 2 40 0 1509 132 30 11 chr2 82780351 82780616 -170475967 + L1M2 LINE L1 5284 5553 -738 213 394 85 12 chr2 82780975 82781140 -170475443 - MIR SINE MIR -83 179 3 207 0 0 0 chr2 82782361 82782384 -170474199 + (A)n Simple_repeat Simple_repeat 1 23 0 303 294 128 0 chr2 82782545 82782647 -170473936 + L2 LINE L2 3199 3313 0 1659 188 10 16 chr2 82782747 82783056 -170473527 + AluJb SINE Alu 1 307 -5 396 249 82 46 chr2 82784708 82784884 -170471699 - MER5A DNA MER1_type -1 177 1 720 177 102 0 chr2 82785176 82785323 -170471260 - MER5B DNA MER1_type 0 178 17 2272 91 0 0 chr2 82785370 82785666 -170470917 - AluY SINE Alu -15 296 1 2108 129 7 0 chr2 82785687 82785982 -170470601 + AluSq SINE Alu 1 297 -16 439 211 144 11 chr2 82786037 82786193 -170470390 - MER5A DNA MER1_type -6 183 4 575 221 76 0 chr2 82786233 82786364 -170470219 + MER5A DNA MER1_type 49 189 0 214 292 56 0 chr2 82786598 82786670 -170469913 + MIR3 SINE MIR 133 208 0 256 327 27 9 chr2 82787094 82787204 -170469379 - MER81 DNA DNA -2 112 1 1131 160 28 0 chr2 82787229 82787410 -170469173 - MER20 DNA MER1_type -33 186 1 182 300 0 0 chr2 82787453 82787493 -170469090 - MER5A DNA MER1_type 0 189 150 1486 216 0 6 chr2 82787494 82787813 -170468770 + L1M4 LINE L1 5333 5649 -535 1353 200 6 28 chr2 82787963 82788283 -170468300 + L1MA5 LINE L1 5653 5965 -335 261 203 16 31 chr2 82788283 82788347 -170468236 + U7 snRNA snRNA 1 63 0 274 204 0 0 chr2 82788402 82788456 -170468127 + L1MA5 LINE L1 5955 6008 -283 328 351 119 0 chr2 82788460 82788628 -170467955 + MIR SINE MIR 57 244 -18 10769 36 0 1 chr2 82788760 82790079 -170466504 - L1PA3 LINE L1 -3133 3013 1696 19677 30 8 2 chr2 82790079 82793243 -170463340 + L1PA3 LINE L1 2999 6168 0 1041 212 59 37 chr2 82795649 82795781 -170460802 - MLT1E1 LTR MaLR -6 648 520 520 193 0 0 chr2 82795781 82795890 -170460693 + L1MA5 LINE L1 6188 6296 -4 1041 212 59 37 chr2 82795890 82795909 -170460674 - MLT1E1 LTR MaLR -134 520 503 2064 149 0 0 chr2 82795909 82796218 -170460365 + AluSx SINE Alu 1 309 -3 1041 212 59 37 chr2 82796218 82796416 -170460167 - MLT1E1 LTR MaLR -151 503 224 1124 213 76 53 chr2 82797409 82797766 -170458817 + MLT1A1 LTR MaLR 1 365 0 184 365 167 8 chr2 82798631 82798757 -170457826 + L3 LINE CR1 967 1112 -465 2085 246 60 10 chr2 82799624 82800144 -170456439 - MLT1H1 LTR MaLR -9 546 1 919 228 44 5 chr2 82800625 82800831 -170455752 - MER20 DNA MER1_type -5 214 1 1611 122 0 0 chr2 82800952 82801174 -170455409 - AluSg/x SINE Alu -17 295 74 611 282 97 5 chr2 82802394 82802589 -170453994 - MIR SINE MIR -48 214 2 876 203 48 88 chr2 82803228 82803558 -170453025 + LTR37B LTR ERV1 3 319 -149 618 190 17 101 chr2 82803561 82803740 -170452843 - L1MC2 LINE L1 -31 6313 6150 314 144 240 68 chr2 82803743 82803889 -170452694 + LTR37B LTR ERV1 296 466 -2 268 242 0 0 chr2 82803892 82803954 -170452629 - MIR SINE MIR -133 129 68 408 176 38 1 chr2 82804505 82804615 -170451968 - MLT1E1 LTR MaLR -445 209 77 283 267 0 0 chr2 82804615 82804690 -170451893 + L1MB8 LINE L1 6104 6178 0 333 239 196 11 chr2 82804717 82804809 -170451774 - MLT1E1 LTR MaLR -484 109 1 300 332 82 24 chr2 82805682 82806062 -170450521 - L1M4 LINE L1 -518 5660 5259 743 223 42 10 chr2 82806067 82806260 -170450323 + MER3 DNA MER1_type 6 204 -5 2608 230 46 28 chr2 82806474 82806928 -170449655 - L1M4c LINE L1 -2987 3657 3213 1518 193 53 3 chr2 82806928 82807250 -170449333 + MER44D DNA MER2_type 2 609 0 2608 230 46 28 chr2 82807250 82807735 -170448848 - L1M4c LINE L1 -3431 3213 2701 32 67 0 0 chr2 82807743 82807803 -170448780 + AT_rich Low_complexity Low_complexity 1 60 0 325 297 46 41 chr2 82807803 82808193 -170448390 - L1M4c LINE L1 -3967 2679 2288 37 0 0 0 chr2 82808257 82808294 -170448289 + AT_rich Low_complexity Low_complexity 1 37 0 650 135 0 36 chr2 82808338 82808449 -170448134 - L1MA1 LINE L1 -8 6294 6188 1701 253 65 17 chr2 82808461 82809184 -170447399 - L1M4c LINE L1 -4565 2079 1261 2101 103 9 23 chr2 82809192 82809727 -170446856 + MER4A LTR ERV1 1 664 0 3340 238 96 48 chr2 82809733 82810916 -170445667 - L1M4c LINE L1 -5288 1254 16 439 267 10 0 chr2 82811072 82811173 -170445410 + MER5A DNA MER1_type 16 117 -72 212 273 0 0 chr2 82811610 82811654 -170444929 + (TTCA)n Simple_repeat Simple_repeat 2 45 0 1132 180 27 14 chr2 82811735 82811957 -170444626 + AluJo SINE Alu 87 311 -1 1507 172 26 0 chr2 82812222 82812525 -170444058 + L1MA4 LINE L1 5984 6294 -6 855 184 68 0 chr2 82812527 82812690 -170443893 + MER5A DNA MER1_type 16 189 0 2068 104 29 0 chr2 82813169 82813447 -170443136 + AluSq SINE Alu 19 304 -9 323 98 0 33 chr2 82813749 82813810 -170442773 + Alu SINE Alu 243 301 -1 1957 49 0 0 chr2 82814124 82814368 -170442215 + L1PA4 LINE L1 5911 6154 -1 224 54 54 0 chr2 82815394 82815431 -170441152 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 180 0 0 0 chr2 82815961 82815981 -170440602 + (T)n Simple_repeat Simple_repeat 1 20 0 1065 227 14 0 chr2 82816057 82816277 -170440306 - MER58A DNA MER1_type -1 223 1 397 333 7 28 chr2 82817257 82817401 -170439182 + MER5A DNA MER1_type 47 187 -2 1587 154 78 63 chr2 82817466 82817848 -170438735 + MLT1B LTR MaLR 1 388 -2 531 289 40 0 chr2 82817856 82818005 -170438578 + MIR SINE MIR 37 191 -71 2095 128 71 52 chr2 82818014 82818435 -170438148 - Tigger2a DNA MER2_type -5 429 1 23 0 0 0 chr2 82820104 82820127 -170436456 + AT_rich Low_complexity Low_complexity 1 23 0 202 239 0 0 chr2 82820800 82820846 -170435737 + A-rich Low_complexity Low_complexity 1 46 0 227 229 0 0 chr2 82821140 82821188 -170435395 + MLT1I LTR MaLR 6 53 -356 451 295 54 0 chr2 82821338 82821487 -170435096 + MLT1I LTR MaLR 241 397 -12 5080 56 3 0 chr2 82823446 82824115 -170432468 + L1PA8 LINE L1 5522 6192 0 23 68 0 0 chr2 82824172 82824216 -170432367 + AT_rich Low_complexity Low_complexity 1 44 0 522 0 0 0 chr2 82825176 82825234 -170431349 + (GA)n Simple_repeat Simple_repeat 1 58 0 413 348 27 59 chr2 82826620 82826697 -170429886 - L3 LINE CR1 -86 1491 1413 2270 77 7 7 chr2 82826697 82826994 -170429589 + AluY SINE Alu 1 297 -14 413 348 27 59 chr2 82826994 82827137 -170429446 - L3 LINE CR1 -164 1413 1278 2886 168 11 45 chr2 82827153 82827690 -170428893 - MLT2B1 LTR ERVL 0 520 2 253 325 13 0 chr2 82828345 82828422 -170428161 + MIR3 SINE MIR 115 192 -16 2721 201 14 8 chr2 82828653 82829245 -170427338 + L1MB7 LINE L1 5588 6182 -2 245 116 47 0 chr2 82829273 82829316 -170427267 - MER5A DNA MER1_type -77 112 68 935 237 16 0 chr2 82829348 82829534 -170427049 + MER5A DNA MER1_type 1 189 0 28 29 0 0 chr2 82829600 82829635 -170426948 + AT_rich Low_complexity Low_complexity 1 35 0 840 320 149 24 chr2 82831019 82831884 -170424699 + L2 LINE L2 2330 3313 0 2962 166 26 10 chr2 82832733 82833240 -170423343 - MLT2B1 LTR ERVL -5 515 1 248 286 12 36 chr2 82833380 82833464 -170423119 + MLT1E LTR MaLR 1 82 -511 342 0 0 0 chr2 82833544 82833582 -170423001 + (TC)n Simple_repeat Simple_repeat 2 39 0 923 226 95 64 chr2 82833616 82833912 -170422671 + MLT1E LTR MaLR 258 588 -5 288 352 28 28 chr2 82834982 82835124 -170421459 + MIR SINE MIR 50 191 -71 348 313 0 20 chr2 82835646 82835745 -170420838 + MIR SINE MIR 2 98 -164 370 407 0 0 chr2 82836736 82836886 -170419697 + MIR3 SINE MIR 19 168 -40 191 261 46 15 chr2 82838105 82838170 -170418413 + L3 LINE CR1 643 709 -868 2797 184 53 14 chr2 82840249 82840830 -170415753 - MER6A DNA MER2_type 0 605 2 246 306 92 20 chr2 82841175 82841273 -170415310 - MIR SINE MIR -63 145 41 220 206 59 22 chr2 82841382 82841518 -170415065 + (TA)n Simple_repeat Simple_repeat 1 141 0 21 36 0 0 chr2 82842124 82842152 -170414431 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr2 82842980 82843005 -170413578 + AT_rich Low_complexity Low_complexity 1 25 0 24 32 0 0 chr2 82844075 82844106 -170412477 + AT_rich Low_complexity Low_complexity 1 31 0 224 297 76 34 chr2 82844569 82844687 -170411896 + L2 LINE L2 3150 3272 0 246 286 76 17 chr2 82845189 82845308 -170411275 + LTR33 LTR ERVL 389 514 -7 59 38 0 0 chr2 82845755 82845835 -170410748 + AT_rich Low_complexity Low_complexity 1 80 0 21 0 0 0 chr2 82846032 82846053 -170410530 + AT_rich Low_complexity Low_complexity 1 21 0 2467 65 0 3 chr2 82846560 82846868 -170409715 + AluY SINE Alu 1 307 -4 355 240 16 70 chr2 82849549 82849678 -170406905 + L2 LINE L2 3150 3271 -42 269 375 10 0 chr2 82849708 82849804 -170406779 + L2 LINE L2 2219 2315 -999 323 245 41 0 chr2 82849829 82849927 -170406656 - L1MA9 LINE L1 -13 6299 6198 230 343 136 47 chr2 82849935 82850273 -170406310 + L2 LINE L2 2332 2699 -615 2237 118 0 0 chr2 82850478 82850782 -170405801 - AluSx SINE Alu -8 304 1 234 376 0 0 chr2 82851829 82851938 -170404645 + HAL1 LINE L1 1584 1692 -815 377 310 18 0 chr2 82852215 82852328 -170404255 + L2 LINE L2 3197 3311 -2 2069 104 55 0 chr2 82852770 82853059 -170403524 + AluSx SINE Alu 1 305 -7 9233 53 7 1 chr2 82853626 82855572 -170401011 - L1PA5 LINE L1 -1 6153 4199 32500 67 2 0 chr2 82855572 82859755 -170396828 + L1PA5 LINE L1 33 4224 -1922 549 214 0 0 chr2 82859889 82860001 -170396582 + FLAM_A SINE Alu 28 139 -3 1119 222 93 51 chr2 82860896 82861197 -170395386 - MLT1A1 LTR MaLR 0 365 47 2465 74 0 0 chr2 82861197 82861495 -170395088 + AluY SINE Alu 1 298 -13 1119 222 93 51 chr2 82861495 82861526 -170395057 - MLT1A1 LTR MaLR -318 47 19 3196 247 52 90 chr2 82861545 82862916 -170393667 - MLT1A1-int LTR MaLR -7 1364 46 250 163 0 0 chr2 82862980 82863023 -170393560 + L1MCa LINE L1 1352 1394 -5032 580 286 70 22 chr2 82863094 82863510 -170393073 + L1MCa LINE L1 1618 2053 -4554 840 188 86 0 chr2 82863520 82863706 -170392877 + MER3 DNA MER1_type 1 202 -7 1080 251 10 7 chr2 82863838 82864129 -170392454 + L1ME1 LINE L1 5692 5983 -183 26 0 0 0 chr2 82864193 82864219 -170392364 + AT_rich Low_complexity Low_complexity 1 26 0 29 0 0 0 chr2 82864269 82864298 -170392285 + AT_rich Low_complexity Low_complexity 1 29 0 191 318 100 0 chr2 82865111 82865221 -170391362 - L2 LINE L2 -71 3242 3122 2152 138 0 0 chr2 82866800 82867111 -170389472 - AluSx SINE Alu -1 311 1 357 344 166 19 chr2 82867854 82868174 -170388409 + MLT1J2 LTR MaLR 11 377 -73 2373 138 9 61 chr2 82869244 82869281 -170387302 - MSTB1 LTR MaLR 0 432 395 2183 122 0 0 chr2 82869281 82869576 -170387007 + AluSx SINE Alu 1 295 -17 2373 138 9 61 chr2 82869576 82869979 -170386604 - MSTB1 LTR MaLR -37 395 15 270 338 57 9 chr2 82870072 82870300 -170386283 - HAL1 LINE L1 -1167 1340 1102 391 110 24 49 chr2 82871135 82871217 -170385366 + L1MB1 LINE L1 6089 6168 -21 830 168 6 22 chr2 82871238 82871417 -170385166 + L1MA10 LINE L1 6159 6334 0 771 270 71 57 chr2 82872415 82872438 -170384145 - MLT1I LTR MaLR -2 407 386 640 264 62 29 chr2 82872438 82872646 -170383937 + MER20 DNA MER1_type 2 216 -3 771 270 71 57 chr2 82872646 82872918 -170383665 - MLT1I LTR MaLR -23 386 108 1000 258 18 25 chr2 82872927 82873202 -170383381 - MLT1E LTR MaLR -2 591 319 2267 115 9 6 chr2 82873212 82873551 -170383032 - L1PB1 LINE L1 -156 5995 5656 1387 192 8 0 chr2 82873639 82873879 -170382704 + AluJb SINE Alu 39 280 -32 216 0 0 0 chr2 82873881 82873905 -170382678 + (TAAAA)n Simple_repeat Simple_repeat 4 27 0 207 0 0 0 chr2 82874136 82874159 -170382424 + (TTTAA)n Simple_repeat Simple_repeat 5 27 0 21 71 0 0 chr2 82874861 82874903 -170381680 + AT_rich Low_complexity Low_complexity 1 42 0 212 57 0 29 chr2 82875703 82875738 -170380845 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 6119 33 0 0 chr2 82875738 82876459 -170380124 - L1PA4 LINE L1 -24 6131 5411 779 271 84 78 chr2 82876994 82877506 -170379077 + MLT1H1 LTR MaLR 39 553 -2 1962 101 11 17 chr2 82877697 82877984 -170378599 + AluSp SINE Alu 24 308 -5 187 319 14 14 chr2 82880055 82880127 -170376456 + L3 LINE CR1 928 999 -578 243 293 19 47 chr2 82881097 82881203 -170375380 - LTR67 LTR ERVL -24 533 431 22 70 0 0 chr2 82881775 82881818 -170374765 + AT_rich Low_complexity Low_complexity 1 43 0 1336 260 49 13 chr2 82882284 82882872 -170373711 + L1MC1 LINE L1 3552 4189 -1957 308 289 0 0 chr2 82882892 82882982 -170373601 + L1MC1 LINE L1 4148 4237 -1909 2144 87 0 11 chr2 82882996 82883271 -170373312 + AluSg SINE Alu 21 292 -18 1222 191 8 29 chr2 82883280 82883521 -170373062 - L1PA13 LINE L1 -4924 1863 1628 2800 234 48 22 chr2 82883560 82884469 -170372114 + L1MC1 LINE L1 4235 5167 -979 1418 60 50 11 chr2 82884469 82884651 -170371932 + AluY SINE Alu 1 189 -122 522 0 0 0 chr2 82885029 82885087 -170371496 + (TA)n Simple_repeat Simple_repeat 1 58 0 3456 151 31 3 chr2 82885392 82886003 -170370580 + L1MC1 LINE L1 5700 6327 -6 195 281 149 18 chr2 82888259 82888373 -170368210 + L2 LINE L2 3184 3312 -1 181 352 0 0 chr2 82888378 82888432 -170368151 + L2 LINE L2 3219 3272 0 686 286 76 66 chr2 82889524 82890038 -170366545 + LTR33A LTR ERVL 38 523 0 254 333 18 3 chr2 82891064 82891178 -170365405 + MIR SINE MIR 5 123 -85 195 260 0 0 chr2 82891185 82891235 -170365348 - MIR SINE MIR -102 160 111 258 315 0 4 chr2 82891584 82891737 -170364846 + MLT1I LTR MaLR 196 396 -13 321 308 42 42 chr2 82891743 82891886 -170364697 + MIR3 SINE MIR 64 206 -2 1610 197 63 29 chr2 82891909 82892290 -170364293 + MSTD LTR MaLR 1 394 -2 390 286 23 8 chr2 82893349 82893482 -170363101 - MIR SINE MIR -60 202 68 243 0 0 0 chr2 82893608 82893635 -170362948 + (TA)n Simple_repeat Simple_repeat 1 27 0 841 92 110 0 chr2 82893908 82894071 -170362512 + AluY SINE Alu 109 289 -22 3734 164 40 58 chr2 82894072 82895094 -170361489 + L1MB7 LINE L1 5120 6133 -51 25 31 0 0 chr2 82895663 82895695 -170360888 + AT_rich Low_complexity Low_complexity 1 32 0 600 215 31 21 chr2 82895720 82895911 -170360672 - HAL1b LINE L1 -180 1168 976 523 305 71 0 chr2 82895995 82896221 -170360362 + Charlie8 DNA MER1_type 48 289 -2128 277 178 67 33 chr2 82898200 82898290 -170358293 - MLT1L LTR MaLR -20 595 503 627 308 9 103 chr2 82898298 82898724 -170357859 + L2 LINE L2 2587 2972 -342 1285 192 87 26 chr2 82898751 82899063 -170357520 - MLT2D LTR ERVL 0 414 84 295 327 120 30 chr2 82899101 82899367 -170357216 + L2 LINE L2 3004 3293 -20 368 240 0 110 chr2 82900242 82900388 -170356195 - FLAM_A SINE Alu -3 130 1 470 328 0 0 chr2 82900775 82900906 -170355677 + ERVL LTR ERVL 567 697 -5067 331 177 42 42 chr2 82901519 82901615 -170354968 + L1MC5 LINE L1 7805 7900 -61 809 281 32 35 chr2 82901793 82902078 -170354505 + ERVL LTR ERVL 4078 4361 -1403 710 311 42 19 chr2 82902321 82902630 -170353953 + ERVL LTR ERVL 4443 4758 -1006 914 296 45 32 chr2 82902667 82903126 -170353457 + ERVL LTR ERVL 4853 5294 -360 21 0 0 0 chr2 82903519 82903540 -170353043 + GC_rich Low_complexity Low_complexity 1 21 0 347 226 6 18 chr2 82903940 82904108 -170352475 + CT-rich Low_complexity Low_complexity 1 166 0 255 196 36 18 chr2 82904615 82904671 -170351912 + GA-rich Low_complexity Low_complexity 3 59 0 199 313 75 12 chr2 82906692 82906772 -170349811 - L2 LINE L2 -86 3186 3102 * 278 343 107 12 chr2 82906760 82906929 -170349654 + MIR SINE MIR 10 194 -68 192 316 77 8 chr2 82907144 82907261 -170349322 - L2 LINE L2 -299 2973 2849 2355 97 0 0 chr2 82909661 82909960 -170346623 + AluSx SINE Alu 3 301 -11 184 258 45 61 chr2 82910053 82910119 -170346464 - L2 LINE L2 -4 3309 3245 711 274 139 3 chr2 82910824 82911112 -170345471 - L1ME2 LINE L1 -5 6159 5833 1742 223 95 14 chr2 82911112 82911773 -170344810 + L1ME LINE L1 5032 5752 -414 549 0 0 0 chr2 82911820 82911881 -170344702 + (TA)n Simple_repeat Simple_repeat 1 61 0 790 258 33 48 chr2 82912132 82912403 -170344180 - MLT1L LTR MaLR -348 267 1 204 272 76 0 chr2 82913456 82913548 -170343035 - L2 LINE L2 -1012 2302 2204 383 228 184 44 chr2 82913607 82913879 -170342704 - L1ME4a LINE L1 -19 6102 5793 838 301 70 19 chr2 82914075 82914632 -170341951 - L1MC4a LINE L1 -339 5825 5317 316 299 86 32 chr2 82914758 82915167 -170341416 - L1MC4a LINE L1 -1446 4700 4264 270 56 0 0 chr2 82915239 82915275 -170341308 + (CA)n Simple_repeat Simple_repeat 2 37 0 443 48 0 238 chr2 82916211 82916270 -170340313 - MADE1 DNA Mariner 0 80 55 224 0 65 0 chr2 82916270 82916301 -170340282 + (CATTA)n Simple_repeat Simple_repeat 3 35 0 443 48 0 238 chr2 82916301 82916346 -170340237 - MADE1 DNA Mariner -25 55 1 23 33 0 0 chr2 82916848 82916878 -170339705 + AT_rich Low_complexity Low_complexity 1 30 0 21 71 0 0 chr2 82916916 82916958 -170339625 + AT_rich Low_complexity Low_complexity 1 42 0 3468 190 34 49 chr2 82917025 82918064 -170338519 + L1MB7 LINE L1 4461 5465 -719 1674 102 84 56 chr2 82918064 82918348 -170338235 + AluSc SINE Alu 1 292 -17 3468 190 34 49 chr2 82918348 82918911 -170337672 + L1MB7 LINE L1 5465 6035 -149 195 42 0 0 chr2 82918911 82918935 -170337648 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 820 220 82 0 chr2 82918945 82919091 -170337492 - AluJo SINE Alu -30 282 117 189 0 0 0 chr2 82919091 82919112 -170337471 + (TTA)n Simple_repeat Simple_repeat 2 22 0 820 220 82 0 chr2 82919112 82919147 -170337436 - AluJo SINE Alu -195 117 86 573 146 36 51 chr2 82919148 82919285 -170337298 + L1MB7 LINE L1 6027 6161 -23 181 344 77 56 chr2 82919745 82919940 -170336643 - L2 LINE L2 -237 3035 2837 253 375 40 6 chr2 82920080 82920256 -170336327 - L2 LINE L2 -956 2358 2177 247 268 81 86 chr2 82921266 82921464 -170335119 - L2 LINE L2 -1311 2003 1807 369 0 0 0 chr2 82921909 82921950 -170334633 + (TA)n Simple_repeat Simple_repeat 2 42 0 2284 99 0 0 chr2 82922397 82922691 -170333892 - AluSg SINE Alu -14 296 3 21 0 0 0 chr2 82922698 82922719 -170333864 + AT_rich Low_complexity Low_complexity 1 21 0 201 122 0 49 chr2 82923416 82923457 -170333126 + (TCTCTG)n Simple_repeat Simple_repeat 1 39 0 24 0 0 0 chr2 82924922 82924946 -170331637 + AT_rich Low_complexity Low_complexity 1 24 0 2128 84 42 3 chr2 82925930 82926217 -170330366 - AluSg SINE Alu -12 298 1 29 28 0 0 chr2 82926366 82926402 -170330181 + AT_rich Low_complexity Low_complexity 1 36 0 273 29 0 0 chr2 82927288 82927322 -170329261 + (TG)n Simple_repeat Simple_repeat 2 35 0 1526 134 4 20 chr2 82927395 82927675 -170328908 - AluSx SINE Alu 0 316 41 275 339 89 62 chr2 82929419 82929711 -170326872 - L2 LINE L2 -472 2842 2543 299 345 27 58 chr2 82929712 82929970 -170326613 + L3 LINE CR1 791 1040 -537 317 276 0 0 chr2 82930739 82930815 -170325768 + L2 LINE L2 3182 3257 -56 862 252 96 0 chr2 82930915 82931133 -170325450 + MIR SINE MIR 2 240 -22 197 240 13 0 chr2 82931865 82931940 -170324643 + (TA)n Simple_repeat Simple_repeat 1 76 0 294 244 12 12 chr2 82932020 82932102 -170324481 + (TA)n Simple_repeat Simple_repeat 1 82 0 312 276 0 0 chr2 82932106 82932182 -170324401 - L1MC4 LINE L1 -1342 6700 6625 2325 95 0 0 chr2 82932344 82932638 -170323945 - AluSc SINE Alu -15 294 1 444 298 130 39 chr2 82933215 82933423 -170323160 + MIR SINE MIR 28 254 -8 1862 144 21 0 chr2 82934667 82934951 -170321632 - AluSx SINE Alu -22 290 1 808 312 108 17 chr2 82935800 82936255 -170320328 + MLT1J LTR MaLR 2 445 -5 22 0 0 0 chr2 82936335 82936357 -170320226 + AT_rich Low_complexity Low_complexity 1 22 0 1000 227 37 29 chr2 82936565 82936807 -170319776 - MIR SINE MIR -4 258 15 216 184 0 0 chr2 82937737 82937786 -170318797 + (TG)n Simple_repeat Simple_repeat 2 50 0 1253 315 93 50 chr2 82940080 82940915 -170315668 - HERVL LTR ERVL -2888 2766 1896 700 335 11 18 chr2 82940921 82941196 -170315387 - LTR16A LTR ERVL -162 288 16 304 266 55 55 chr2 82941487 82941615 -170314968 - MIR SINE MIR -124 138 11 838 195 118 118 chr2 82941841 82942308 -170314275 - MER4A LTR ERV1 -9 655 189 2057 146 138 5 chr2 82942308 82942686 -170313897 - MSTA LTR MaLR 0 428 1 7804 153 94 23 chr2 82942686 82944159 -170312424 - MSTA-int LTR MaLR 0 1580 3 1906 170 138 8 chr2 82944161 82944537 -170312046 - MSTA LTR MaLR 0 428 4 922 132 24 83 chr2 82944540 82944745 -170311838 - MER4A LTR ERV1 -471 193 1 785 237 27 49 chr2 82947675 82947899 -170308684 - L3b LINE CR1 -108 1475 1257 236 270 14 14 chr2 82949629 82949703 -170306880 + CT-rich Low_complexity Low_complexity 2 75 0 195 326 20 20 chr2 82950003 82950101 -170306482 - MER5A DNA MER1_type -29 160 63 206 338 141 7 chr2 82950567 82950709 -170305874 - MIR SINE MIR -30 232 72 217 311 74 41 chr2 82950868 82950990 -170305593 - L2 LINE L2 -1335 1979 1854 4201 181 47 35 chr2 82951633 82953051 -170303532 - L1MB7 LINE L1 -11 6173 4730 228 86 0 0 chr2 82953586 82953621 -170302962 + (TG)n Simple_repeat Simple_repeat 1 35 0 246 62 0 0 chr2 82953870 82953902 -170302681 + (TA)n Simple_repeat Simple_repeat 2 33 0 59 44 0 26 chr2 82954925 82955038 -170301545 + AT_rich Low_complexity Low_complexity 1 110 0 264 247 0 52 chr2 82955631 82955708 -170300875 + L2 LINE L2 3150 3222 -91 520 344 140 27 chr2 82955775 82955854 -170300729 - L2 LINE L2 -571 2743 2674 1696 171 45 18 chr2 82955854 82956188 -170300395 - MER61A LTR ERV1 0 343 1 520 344 140 27 chr2 82956188 82956849 -170299734 - L2 LINE L2 -640 2674 1919 241 271 29 14 chr2 82958837 82958907 -170297676 + L2 LINE L2 3227 3297 -16 2095 116 20 3 chr2 82959036 82959338 -170297245 + AluSx SINE Alu 3 309 -3 1578 192 0 39 chr2 82959454 82959761 -170296822 + AluJb SINE Alu 1 295 -17 270 273 137 36 chr2 82962032 82962171 -170294412 - L3 LINE CR1 -4 1573 1421 298 385 119 15 chr2 82962243 82962570 -170294013 + L2 LINE L2 2601 2961 -353 241 263 337 0 chr2 82963080 82963175 -170293408 + MIR3 SINE MIR 15 141 -67 1942 155 0 7 chr2 82963182 82963479 -170293104 + AluSx SINE Alu 1 295 -17 5708 133 7 0 chr2 82964925 82965808 -170290775 - L1PA15 LINE L1 -1 6164 5276 537 297 74 15 chr2 82966524 82966726 -170289857 + MIR SINE MIR 20 233 -29 342 189 68 0 chr2 82966783 82966857 -170289726 + MARNA DNA Mariner 295 373 -213 319 313 60 65 chr2 82966959 82967160 -170289423 + L1ME2 LINE L1 5959 6158 -6 323 299 43 33 chr2 82968891 82969075 -170287508 - L1M4 LINE L1 -784 5362 5177 560 265 66 19 chr2 82969196 82969503 -170287080 - L1M4 LINE L1 -1089 5057 4744 686 144 15 37 chr2 82969725 82969998 -170286585 + CT-rich Low_complexity Low_complexity 1 266 0 2294 93 7 0 chr2 82970328 82970628 -170285955 - AluSp SINE Alu -11 302 1 1411 276 99 15 chr2 82970896 82971360 -170285223 + MLT1E2 LTR MaLR 123 625 -1 2001 142 3 0 chr2 82971958 82972254 -170284329 + AluSx SINE Alu 1 297 -15 619 275 52 5 chr2 82972808 82973001 -170283582 + MIR SINE MIR 61 262 0 234 253 137 61 chr2 82973159 82973452 -170283131 - L1MC5 LINE L1 -167 7794 7480 1387 218 66 73 chr2 82973462 82973936 -170282647 - L1ME1 LINE L1 -5 6161 5680 1165 229 38 41 chr2 82974200 82974545 -170282038 - L1ME1 LINE L1 -480 5686 5343 387 233 0 33 chr2 82974837 82974957 -170281626 - L1MC5 LINE L1 -751 7210 7095 2210 106 23 3 chr2 82975230 82975533 -170281050 - AluSx SINE Alu -2 310 2 296 301 75 33 chr2 82975997 82976210 -170280373 - L1ME1 LINE L1 -1929 4217 3996 24 32 0 0 chr2 82976211 82976242 -170280341 + AT_rich Low_complexity Low_complexity 1 31 0 240 35 0 0 chr2 82977222 82977251 -170279332 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 4046 109 7 0 chr2 82977394 82977982 -170278601 - L1PB2 LINE L1 -3 6148 5557 535 182 134 59 chr2 82977982 82978169 -170278414 - MIR SINE MIR -60 202 2 261 270 30 20 chr2 82978179 82978279 -170278304 + CT-rich Low_complexity Low_complexity 1 101 0 229 255 245 0 chr2 82979645 82979739 -170276844 + MIR SINE MIR 136 252 -10 27 0 0 0 chr2 82982614 82982641 -170273942 + AT_rich Low_complexity Low_complexity 1 27 0 2375 85 0 35 chr2 82982827 82983146 -170273437 - AluSq SINE Alu -5 308 1 2169 121 3 3 chr2 82984595 82984902 -170271681 - AluSx SINE Alu -5 307 1 608 312 49 8 chr2 82985015 82985262 -170271321 + MIR SINE MIR 4 260 -2 183 162 0 0 chr2 82985546 82985583 -170271000 + (CAT)n Simple_repeat Simple_repeat 2 38 0 722 372 74 31 chr2 82985730 82986571 -170270012 + L2 LINE L2 1879 2755 -559 323 270 40 0 chr2 82986893 82986967 -170269616 + L2 LINE L2 3191 3267 -5 2351 58 20 0 chr2 82987907 82988200 -170268383 + AluY SINE Alu 3 301 -10 6256 167 20 24 chr2 82988326 82990002 -170266581 - L1MC1 LINE L1 0 6333 4667 354 255 99 121 chr2 82990573 82990887 -170265696 + L3 LINE CR1 1141 1447 -130 1868 151 3 7 chr2 82990893 82991191 -170265392 - AluSx SINE Alu -15 297 1 1661 198 39 20 chr2 82991386 82991744 -170264839 - MLT1A1 LTR MaLR 0 365 1 1889 156 77 3 chr2 82992531 82992871 -170263712 - MER47A DNA MER2_type 0 366 2 718 306 139 32 chr2 82992903 82994304 -170262279 + L1M4 LINE L1 3791 5341 -805 361 161 0 0 chr2 82994906 82994962 -170261621 - Tigger5 DNA MER2_type -2243 80 25 6814 256 78 41 chr2 82995022 82996336 -170260247 + L1ME1 LINE L1 111 1375 -4860 1442 193 37 27 chr2 82996336 82996456 -170260127 + AluJo SINE Alu 1 118 -194 219 69 0 0 chr2 82996456 82996485 -170260098 + (TAA)n Simple_repeat Simple_repeat 2 30 0 1442 193 37 27 chr2 82996485 82996664 -170259919 + AluJo SINE Alu 118 303 -9 6814 256 78 41 chr2 82996664 82996979 -170259604 + L1ME1 LINE L1 1375 1677 -4558 2262 92 0 3 chr2 82996979 82997282 -170259301 - AluY SINE Alu -9 302 1 6814 256 78 41 chr2 82997282 82999979 -170256604 + L1ME1 LINE L1 1677 4748 -1487 229 269 51 0 chr2 82999979 83000057 -170256526 - MER53 DNA DNA -1 188 107 6814 256 78 41 chr2 83000057 83001556 -170255027 + L1ME1 LINE L1 4748 6191 -44 283 221 214 8 chr2 83001460 83001591 -170254992 + L1MA10 LINE L1 6243 6400 -3 * 24 0 0 0 chr2 83004154 83004178 -170252405 + AT_rich Low_complexity Low_complexity 1 24 0 733 160 17 0 chr2 83004412 83004531 -170252052 - FLAM_C SINE Alu -11 122 2 552 281 32 45 chr2 83004539 83004760 -170251823 - MIR SINE MIR -43 219 2 3240 213 65 35 chr2 83005151 83006195 -170250388 - MER69 DNA AcHobo 0 2526 1451 1209 251 111 74 chr2 83006198 83006739 -170249844 - MER69 DNA AcHobo -1796 730 170 468 239 26 0 chr2 83006736 83006849 -170249734 + MER58B DNA MER1_type 214 329 -12 * 241 311 17 17 chr2 83007445 83007564 -170249019 - HAL1 LINE L1 -863 1644 1526 2285 105 0 7 chr2 83007608 83007913 -170248670 - AluSg SINE Alu -7 303 1 493 261 103 93 chr2 83007999 83008386 -170248197 - L1MEd LINE L1 -4914 1205 815 304 266 139 108 chr2 83008393 83008810 -170247773 - MLT1L LTR MaLR -17 598 169 2147 116 0 0 chr2 83009635 83009929 -170246654 + AluSx SINE Alu 1 294 -18 23 33 0 0 chr2 83010184 83010214 -170246369 + AT_rich Low_complexity Low_complexity 1 30 0 292 332 39 39 chr2 83010945 83011153 -170245430 + L2 LINE L2 2841 3048 -224 4259 170 107 24 chr2 83011896 83012859 -170243724 + L1MC3 LINE L1 6611 7653 -132 405 332 49 28 chr2 83013327 83013574 -170243009 - MLT1J2 LTR MaLR -70 380 129 255 321 0 0 chr2 83014694 83014775 -170241808 + CT-rich Low_complexity Low_complexity 2 82 0 184 365 108 6 chr2 83015352 83015519 -170241064 - L2 LINE L2 0 3313 3130 394 175 9 105 chr2 83016198 83016312 -170240271 - MER112 DNA MER1_type -157 103 1 594 75 0 0 chr2 83017285 83017365 -170239218 + (TG)n Simple_repeat Simple_repeat 2 81 0 29 0 0 0 chr2 83017630 83017659 -170238924 + AT_rich Low_complexity Low_complexity 1 29 0 2089 119 14 3 chr2 83018878 83019172 -170237411 + AluSx SINE Alu 1 297 -15 204 392 82 0 chr2 83019691 83019862 -170236721 + L2 LINE L2 2725 2909 -405 308 319 76 0 chr2 83019897 83020016 -170236567 - L1ME LINE L1 -469 5652 5525 225 308 157 11 chr2 83020205 83020390 -170236193 - L2 LINE L2 -2474 840 629 1854 207 30 90 chr2 83020477 83021080 -170235503 + MER74B LTR ERVL 56 622 0 24 32 0 0 chr2 83022879 83022910 -170233673 + AT_rich Low_complexity Low_complexity 1 31 0 795 260 23 9 chr2 83023522 83023741 -170232842 - MER58A DNA MER1_type -1 223 2 430 275 225 8 chr2 83023862 83024106 -170232477 - MLT1L LTR MaLR -97 518 222 593 329 111 43 chr2 83025637 83025928 -170230655 - L2 LINE L2 -541 2773 2503 1748 54 4 42 chr2 83025928 83026167 -170230416 + AluY SINE Alu 71 300 -11 593 329 111 43 chr2 83026167 83026206 -170230377 - L2 LINE L2 -811 2503 2468 2114 121 3 3 chr2 83026206 83026511 -170230072 - AluSq SINE Alu -8 305 1 593 329 111 43 chr2 83026511 83026686 -170229897 - L2 LINE L2 -846 2468 2233 640 214 8 0 chr2 83026687 83026818 -170229765 + AluY SINE Alu 1 132 -179 1951 37 0 37 chr2 83026929 83027170 -170229413 + AluY SINE Alu 80 311 0 232 273 146 49 chr2 83027184 83027389 -170229194 - L2 LINE L2 -1067 2247 2023 22 56 0 0 chr2 83027556 83027592 -170228991 + AT_rich Low_complexity Low_complexity 1 36 0 445 193 14 43 chr2 83027592 83027732 -170228851 - L1ME4a LINE L1 -80 6041 5906 442 215 11 0 chr2 83027732 83027825 -170228758 - U6 snRNA snRNA 0 107 14 630 303 46 46 chr2 83027838 83028205 -170228378 - L2 LINE L2 -1384 1930 1564 245 358 45 8 chr2 83028732 83028866 -170227717 + MIR SINE MIR 117 255 -7 23 0 0 0 chr2 83029631 83029654 -170226929 + AT_rich Low_complexity Low_complexity 1 23 0 198 314 23 35 chr2 83030135 83030221 -170226362 + L2 LINE L2 3186 3270 -2 25 0 0 0 chr2 83030355 83030380 -170226203 + AT_rich Low_complexity Low_complexity 1 25 0 270 0 0 0 chr2 83030803 83030833 -170225750 + (TG)n Simple_repeat Simple_repeat 1 30 0 201 337 34 0 chr2 83033342 83033431 -170223152 + L3b LINE CR1 1261 1352 -231 2209 94 3 0 chr2 83033783 83034071 -170222512 + AluSc SINE Alu 1 289 -20 875 220 11 0 chr2 83034241 83034427 -170222156 + MER5A DNA MER1_type 1 188 -1 1444 234 62 35 chr2 83034427 83034829 -170221754 - MLT1E2 LTR MaLR 0 626 214 2061 110 0 7 chr2 83034903 83035209 -170221374 - AluSg SINE Alu 0 304 1 735 148 0 63 chr2 83035215 83035357 -170221226 - MLT1E2 LTR MaLR -442 184 52 334 305 106 35 chr2 83035787 83035843 -170220740 + MIR SINE MIR 4 55 -207 1879 175 0 13 chr2 83035843 83036158 -170220425 - AluJb SINE Alu -1 311 1 334 305 106 35 chr2 83036158 83036242 -170220341 + MIR SINE MIR 55 154 -108 199 337 50 40 chr2 83036615 83036716 -170219867 - MIR SINE MIR -78 184 83 1948 164 3 3 chr2 83037388 83037700 -170218883 - AluJo SINE Alu 0 312 1 526 240 71 13 chr2 83038221 83038375 -170218208 - MIR SINE MIR -36 226 64 422 279 29 29 chr2 83038404 83038540 -170218043 + L2 LINE L2 3164 3299 -14 3006 36 0 0 chr2 83041511 83041870 -170214713 - L1PA2 LINE L1 -4 6151 5793 1202 0 0 0 chr2 83041870 83042003 -170214580 + L1P1 LINE L1 5474 5606 -549 1812 209 87 39 chr2 83043148 83043630 -170212953 - MLT1D LTR MaLR 0 505 1 2125 248 15 103 chr2 83043630 83044409 -170212174 - MLT1D-int LTR MaLR 0 1371 661 2966 195 7 40 chr2 83044460 83045138 -170211445 - MLT1D-int LTR MaLR -715 656 1 1664 210 113 29 chr2 83045138 83045581 -170211002 - MLT1D LTR MaLR 0 505 26 733 235 173 0 chr2 83045721 83045993 -170210590 + MER5C DNA MER1_type 6 324 0 2197 124 0 0 chr2 83046418 83046716 -170209867 + AluSx SINE Alu 1 298 -14 1024 320 111 39 chr2 83047721 83048769 -170207814 + L1M4 LINE L1 2850 3972 -2174 275 323 191 5 chr2 83049072 83049261 -170207322 + MIR SINE MIR 24 247 -15 36 53 0 0 chr2 83049819 83049876 -170206707 + AT_rich Low_complexity Low_complexity 1 57 0 21 0 0 0 chr2 83049895 83049916 -170206667 + AT_rich Low_complexity Low_complexity 1 21 0 1506 188 34 20 chr2 83050586 83050884 -170205699 + AluJo SINE Alu 1 302 -10 327 208 16 56 chr2 83050964 83051089 -170205494 + (CATATA)n Simple_repeat Simple_repeat 4 123 0 241 202 5 53 chr2 83051093 83051198 -170205385 - L1MC3 LINE L1 -1139 6702 6571 186 177 32 16 chr2 83051205 83051267 -170205316 + (CATATA)n Simple_repeat Simple_repeat 3 65 0 27 73 0 0 chr2 83051325 83051380 -170205203 + AT_rich Low_complexity Low_complexity 1 55 0 517 309 65 31 chr2 83053702 83053993 -170202590 + L2 LINE L2 1990 2290 -1024 782 318 91 42 chr2 83054018 83054747 -170201836 + L2 LINE L2 2540 3313 0 491 167 36 43 chr2 83055379 83055517 -170201066 + MER53 DNA DNA 2 138 -51 437 173 7 65 chr2 83055394 83055533 -170201050 - MER53 DNA DNA -7 182 52 * 2579 52 7 0 chr2 83055574 83055882 -170200701 - AluY SINE Alu -1 310 1 302 330 64 34 chr2 83058516 83058631 -170197952 + L2 LINE L2 2733 2843 -471 1309 209 67 33 chr2 83058631 83058961 -170197622 - MER58B DNA MER1_type 0 341 1 302 330 64 34 chr2 83058961 83059081 -170197502 + L2 LINE L2 2843 2975 -339 2080 155 13 0 chr2 83059090 83059393 -170197190 - AluSx SINE Alu -5 307 1 214 164 218 0 chr2 83059593 83059648 -170196935 + L2 LINE L2 3245 3311 -2 515 310 158 5 chr2 83059801 83060004 -170196579 + MIR SINE MIR 29 262 0 24 53 0 0 chr2 83061127 83061165 -170195418 + AT_rich Low_complexity Low_complexity 1 38 0 335 290 0 11 chr2 83061179 83061272 -170195311 + L1MC4 LINE L1 6612 6703 -1339 396 0 0 0 chr2 83061280 83061324 -170195259 + (TG)n Simple_repeat Simple_repeat 2 45 0 437 284 35 45 chr2 83061656 83061857 -170194726 - MIR SINE MIR -1 261 63 1771 258 70 45 chr2 83062585 83063244 -170193339 - MER97c DNA MER1_type? -404 686 12 332 295 73 5 chr2 83063996 83064148 -170192435 + MIR3 SINE MIR 47 206 -2 3469 182 45 71 chr2 83064317 83065205 -170191378 + MER72-int LTR ERV1 5894 6758 0 3207 146 171 7 chr2 83065205 83065809 -170190774 + MER72 LTR ERV1 1 703 -19 763 269 110 48 chr2 83067176 83067611 -170188972 + L2 LINE L2 1220 1681 -1633 6742 62 8 0 chr2 83068079 83069598 -170186985 - L1PA7 LINE L1 0 6154 4631 480 244 8 8 chr2 83070367 83070486 -170186097 + MIR SINE MIR 46 164 -98 1574 52 0 0 chr2 83070488 83070682 -170185901 + L1PA8 LINE L1 5669 5862 -310 321 288 114 37 chr2 83070703 83071332 -170185251 - L1MEc LINE L1 -4706 1604 927 750 319 67 73 chr2 83071802 83072282 -170184301 + MLT1G1 LTR MaLR 104 580 -15 216 152 0 43 chr2 83072596 83072642 -170183941 + (CATATA)n Simple_repeat Simple_repeat 5 48 0 516 290 98 45 chr2 83072642 83073114 -170183469 - L1MEc LINE L1 -5185 934 438 264 326 97 43 chr2 83074825 83075188 -170181395 + L2 LINE L2 2723 3106 -166 515 250 167 0 chr2 83075340 83075508 -170181075 + MLT1J LTR MaLR 4 199 -312 25 0 0 0 chr2 83075964 83075989 -170180594 + AT_rich Low_complexity Low_complexity 1 25 0 185 294 15 15 chr2 83076534 83076602 -170179981 - MIR SINE MIR -1 261 194 337 229 9 142 chr2 83076699 83076917 -170179666 - MER112 DNA MER1_type -10 250 62 2585 45 0 10 chr2 83078673 83078986 -170177597 - AluY SINE Alu -1 310 1 866 196 7 0 chr2 83079957 83080110 -170176473 - FRAM SINE Alu -29 147 1 1966 139 26 3 chr2 83082549 83082852 -170173731 - AluJb SINE Alu -1 311 2 400 316 18 0 chr2 83083351 83083465 -170173118 + L3 LINE CR1 1461 1576 -1 524 175 87 0 chr2 83084010 83084113 -170172470 + AluJb SINE Alu 120 231 -81 21 0 0 0 chr2 83084912 83084933 -170171650 + AT_rich Low_complexity Low_complexity 1 21 0 356 236 9 47 chr2 83085322 83085428 -170171155 - L2 LINE L2 -3 3310 3209 22 35 0 0 chr2 83085514 83085543 -170171040 + AT_rich Low_complexity Low_complexity 1 29 0 562 282 29 17 chr2 83086947 83087121 -170169462 + MER5A DNA MER1_type 14 189 0 2353 97 6 3 chr2 83088104 83088415 -170168168 + AluSq SINE Alu 1 312 -1 22 35 0 0 chr2 83088528 83088557 -170168026 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr2 83089052 83089077 -170167506 + AT_rich Low_complexity Low_complexity 1 25 0 200 325 62 0 chr2 83089410 83089490 -170167093 - MIR SINE MIR 0 262 178 21 0 0 0 chr2 83090439 83090460 -170166123 + AT_rich Low_complexity Low_complexity 1 21 0 6370 126 114 14 chr2 83090574 83091735 -170164848 + MER52C LTR ERV1 1 1277 -1 2905 13 0 0 chr2 83092837 83093153 -170163430 - AluYb8 SINE Alu -2 316 1 21 36 0 0 chr2 83094898 83094926 -170161657 + AT_rich Low_complexity Low_complexity 1 28 0 240 277 12 12 chr2 83095043 83095126 -170161457 + (CATATA)n Simple_repeat Simple_repeat 5 87 0 2304 44 0 4 chr2 83095515 83095788 -170160795 - AluY SINE Alu -7 304 33 920 156 30 106 chr2 83095969 83096206 -170160377 + MER20 DNA MER1_type 1 219 0 1597 158 29 22 chr2 83096220 83096531 -170160052 + MER44D DNA MER2_type 1 583 -26 279 365 62 34 chr2 83096872 83097050 -170159533 - L2 LINE L2 -177 3095 2913 2540 49 3 0 chr2 83097090 83097396 -170159187 + AluY SINE Alu 1 307 -4 240 281 31 125 chr2 83098100 83098292 -170158291 - MER91A DNA MER1_type -22 174 1 182 167 83 0 chr2 83098978 83099014 -170157569 - L2 LINE L2 -8 3305 3267 28 0 0 0 chr2 83099616 83099644 -170156939 + AT_rich Low_complexity Low_complexity 1 28 0 215 342 37 0 chr2 83100420 83100535 -170156048 + MIR SINE MIR 92 214 -48 238 65 22 22 chr2 83101715 83101761 -170154822 + (TG)n Simple_repeat Simple_repeat 1 46 0 1344 223 43 15 chr2 83102692 83103019 -170153564 - MER58B DNA MER1_type 0 341 6 476 301 58 0 chr2 83103072 83103245 -170153338 - MIR SINE MIR -1 261 79 280 330 113 9 chr2 83103238 83103344 -170153239 + MIR SINE MIR 27 143 -65 * 288 265 83 23 chr2 83103928 83104060 -170152523 + L3 LINE CR1 198 337 -1240 881 146 0 0 chr2 83104307 83104437 -170152146 + FRAM SINE Alu 1 130 -46 24 0 0 0 chr2 83104443 83104467 -170152116 + AT_rich Low_complexity Low_complexity 1 24 0 256 365 0 10 chr2 83104471 83104567 -170152016 - L2 LINE L2 -23 3290 3196 373 287 122 18 chr2 83104955 83105119 -170151464 - MER91A DNA MER1_type -15 181 1 453 215 0 25 chr2 83105215 83105336 -170151247 + L1MB2 LINE L1 6054 6171 0 741 325 39 63 chr2 83105755 83105919 -170150664 + L3 LINE CR1 1024 1190 -387 2299 75 6 50 chr2 83105919 83106237 -170150346 + AluSq SINE Alu 4 307 -6 741 325 39 63 chr2 83106237 83106485 -170150098 + L3 LINE CR1 1190 1426 -151 467 285 186 29 chr2 83106791 83107205 -170149378 + HAL1 LINE L1 1344 1822 -685 23 0 0 0 chr2 83107237 83107260 -170149323 + AT_rich Low_complexity Low_complexity 1 23 0 1580 88 67 119 chr2 83107279 83107607 -170148976 - L1PA11 LINE L1 0 6174 5864 291 289 93 26 chr2 83107598 83107868 -170148715 + HAL1 LINE L1 1811 2098 -409 * 392 301 11 57 chr2 83107955 83108237 -170148346 + HAL1 LINE L1 2238 2506 -1 201 315 19 0 chr2 83108265 83108319 -170148264 + L3 LINE CR1 1414 1468 -109 5502 170 47 14 chr2 83109921 83111898 -170144685 - L1PA16 LINE L1 -1 6165 4127 1137 187 109 27 chr2 83112190 83112548 -170144035 - MSTC LTR MaLR 0 428 1 316 286 20 20 chr2 83113125 83113223 -170143360 - L2 LINE L2 0 3272 3175 460 244 102 73 chr2 83113552 83113826 -170142757 + L2 LINE L2 3029 3310 -3 2394 86 0 0 chr2 83115546 83115850 -170140733 + AluY SINE Alu 6 309 -2 213 296 19 0 chr2 83116287 83116341 -170140242 + MIR SINE MIR 45 99 -163 2043 129 20 32 chr2 83117330 83117671 -170138912 + MER1B DNA MER1_type 1 337 0 7259 35 6 3 chr2 83118568 83120023 -170136560 - L1PA3 LINE L1 0 6155 4715 422 333 103 0 chr2 83120076 83120241 -170136342 - MIR3 SINE MIR -12 196 15 341 270 30 0 chr2 83120293 83120393 -170136190 - MIR SINE MIR -48 214 112 189 305 135 28 chr2 83121160 83121301 -170135282 + MIR SINE MIR 80 235 -27 22 35 0 0 chr2 83121856 83121885 -170134698 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 83122991 83123012 -170133571 + AT_rich Low_complexity Low_complexity 1 21 0 813 290 87 36 chr2 83123697 83124111 -170132472 - MLT1J2 LTR MaLR -14 436 2 1305 226 192 46 chr2 83124201 83124830 -170131753 - Charlie7 DNA MER1_type -1890 722 2 538 236 29 23 chr2 83125375 83125549 -170131034 - MER104 DNA Tc2 -3 177 3 2251 97 0 3 chr2 83128074 83128372 -170128211 + AluSx SINE Alu 2 298 -14 324 317 50 0 chr2 83128477 83128597 -170127986 + MER5A DNA MER1_type 64 189 0 361 242 88 0 chr2 83128646 83128737 -170127846 - MER5A DNA MER1_type -90 99 1 183 360 48 41 chr2 83129867 83130014 -170126569 + L2 LINE L2 2768 2915 -399 192 125 0 0 chr2 83130079 83130111 -170126472 + (T)n Simple_repeat Simple_repeat 1 32 0 499 32 0 0 chr2 83130572 83130634 -170125949 - L1PB4 LINE L1 -12 6144 6083 2218 107 41 6 chr2 83131013 83131351 -170125232 - L1PA13 LINE L1 -1 6162 5813 389 276 8 0 chr2 83132444 83132567 -170124016 - L1M4 LINE L1 -1567 4579 4456 348 329 68 21 chr2 83132682 83132919 -170123664 - L1M4 LINE L1 -1824 4322 4075 2289 120 0 0 chr2 83134531 83134840 -170121743 - AluSq SINE Alu -3 310 2 4419 172 49 21 chr2 83136124 83136156 -170120427 - L1MB2 LINE L1 -14 6157 6127 2215 105 3 10 chr2 83136156 83136470 -170120113 + AluSx SINE Alu 1 312 0 4419 172 49 21 chr2 83136470 83137422 -170119161 - L1MB2 LINE L1 -44 6127 5142 249 360 261 29 chr2 83137652 83137966 -170118617 + L2 LINE L2 2886 3272 0 351 305 8 0 chr2 83138368 83138486 -170118097 - L1MA10 LINE L1 -18 6316 6198 22 35 0 0 chr2 83139741 83139770 -170116813 + AT_rich Low_complexity Low_complexity 1 29 0 2521 173 26 7 chr2 83139884 83140341 -170116242 - LTR32 LTR ERVL 0 471 6 223 295 114 7 chr2 83140675 83140815 -170115768 + MIR SINE MIR 39 191 -71 25 0 0 0 chr2 83140865 83140890 -170115693 + AT_rich Low_complexity Low_complexity 1 25 0 770 210 24 0 chr2 83141267 83141434 -170115149 + MER5B DNA MER1_type 2 172 -6 763 114 0 0 chr2 83141588 83141693 -170114890 + AluY SINE Alu 1 105 -206 311 349 58 67 chr2 83142437 83142767 -170113816 - L2 LINE L2 -7 3265 2939 2220 131 28 0 chr2 83143037 83143389 -170113194 - L1MA6 LINE L1 -341 5959 5598 200 286 18 0 chr2 83144585 83144641 -170111942 + CT-rich Low_complexity Low_complexity 4 60 0 234 0 0 0 chr2 83144768 83144794 -170111789 + (TG)n Simple_repeat Simple_repeat 1 26 0 252 122 0 0 chr2 83144827 83144868 -170111715 + (TA)n Simple_repeat Simple_repeat 2 42 0 2136 97 10 13 chr2 83145075 83145383 -170111200 + AluSq SINE Alu 1 307 -6 234 0 0 0 chr2 83146347 83146373 -170110210 + (A)n Simple_repeat Simple_repeat 1 26 0 189 0 0 0 chr2 83146901 83146922 -170109661 + (A)n Simple_repeat Simple_repeat 1 21 0 218 250 64 86 chr2 83147279 83147419 -170109164 + MER5A DNA MER1_type 26 162 -27 * 654 209 52 7 chr2 83147295 83147448 -170109135 - MER5A DNA MER1_type -26 163 4 22 35 0 0 chr2 83147558 83147587 -170108996 + AT_rich Low_complexity Low_complexity 1 29 0 2092 139 0 7 chr2 83147803 83148104 -170108479 - AluSg SINE Alu -11 299 1 910 33 0 58 chr2 83149069 83149189 -170107394 - AluY SINE Alu -12 299 187 1006 268 73 10 chr2 83149316 83149618 -170106965 + Zaphod DNA AcHobo 24 344 -3687 641 242 185 30 chr2 83149648 83150053 -170106530 + Zaphod DNA AcHobo 414 881 -3150 1332 54 0 0 chr2 83150190 83150358 -170106225 + L1PA4 LINE L1 5988 6155 0 1630 121 104 53 chr2 83150405 83150743 -170105840 + THE1A LTR MaLR 1 355 0 1416 99 5 0 chr2 83150765 83150976 -170105607 - L1P LINE L1 -3963 2183 1972 6966 62 6 0 chr2 83150976 83152092 -170104491 + L1PA7 LINE L1 5030 6151 -3 800 229 60 15 chr2 83152107 83152374 -170104209 + L1M4 LINE L1 4929 5207 -939 433 290 0 39 chr2 83152479 83152634 -170103949 + LTR16B LTR ERVL 172 320 -144 1205 56 0 12 chr2 83154212 83154374 -170102209 + L1PA4 LINE L1 5995 6154 -1 194 280 60 30 chr2 83154447 83154547 -170102036 - L2 LINE L2 -902 2412 2310 * 435 287 161 0 chr2 83154518 83154692 -170101891 + MIR SINE MIR 51 252 -10 6376 159 19 13 chr2 83155010 83156769 -170099814 + L1PB1 LINE L1 4009 5783 -368 279 0 0 0 chr2 83156769 83156800 -170099783 + (TG)n Simple_repeat Simple_repeat 2 32 0 6376 159 19 13 chr2 83156800 83157171 -170099412 + L1PB1 LINE L1 5783 6150 -1 1185 254 64 9 chr2 83157265 83157611 -170098972 + MLT1C LTR MaLR 100 464 -3 506 345 169 21 chr2 83157697 83158134 -170098449 + L2 LINE L2 2173 2674 -640 534 264 43 115 chr2 83158154 83158259 -170098324 - LTR16A LTR ERVL -40 410 299 505 231 9 0 chr2 83158259 83158367 -170098216 - MER81 DNA DNA -2 112 4 534 264 43 115 chr2 83158367 83158677 -170097906 - LTR16A LTR ERVL -151 299 25 2908 225 38 41 chr2 83158911 83159905 -170096678 + L1M4 LINE L1 3887 4877 -1269 * 5809 23 7 0 chr2 83159903 83160664 -170095919 + L1PA4 LINE L1 5173 5937 -218 2309 99 3 7 chr2 83160764 83161067 -170095516 - AluSx SINE Alu -10 302 1 1554 138 68 37 chr2 83161400 83161725 -170094858 + L1MA4 LINE L1 5965 6299 -1 1668 207 3 0 chr2 83162997 83163296 -170093287 - AluJo SINE Alu -12 300 1 571 262 68 54 chr2 83165447 83165668 -170090915 - MLT1H LTR MaLR -323 226 3 528 134 31 21 chr2 83165948 83166045 -170090538 + MER4A LTR ERV1 1 98 -566 1396 160 45 33 chr2 83166045 83166388 -170090195 + MER4A LTR ERV1 261 465 0 239 211 96 0 chr2 83166395 83166447 -170090136 + MLT1K LTR MaLR 520 576 -12 1253 152 72 34 chr2 83166798 83167035 -170089548 + AluJo SINE Alu 37 282 -30 191 328 0 15 chr2 83167416 83167483 -170089100 + L2 LINE L2 3247 3312 -1 186 133 0 0 chr2 83167604 83167634 -170088949 + (GGGGA)n Simple_repeat Simple_repeat 5 34 0 3410 113 51 10 chr2 83167815 83168321 -170088262 + MER1A DNA MER1_type 1 527 0 290 264 146 16 chr2 83168562 83168808 -170087775 - L1MEd LINE L1 -5079 1040 763 561 354 101 67 chr2 83168831 83169493 -170087090 - L1MEd LINE L1 -5416 703 19 419 254 18 0 chr2 83169582 83169696 -170086887 + AluJo/FLAM SINE Alu 1 116 -196 2457 43 0 17 chr2 83169696 83169997 -170086586 - AluY SINE Alu -15 296 1 416 169 28 0 chr2 83170039 83170110 -170086473 - AluSg/x SINE Alu -26 286 214 203 333 26 0 chr2 83170113 83170191 -170086392 - MIR SINE MIR -148 114 35 268 371 75 37 chr2 83170974 83171430 -170085153 + L2 LINE L2 2454 2926 -388 1036 181 0 0 chr2 83171823 83171994 -170084589 + AluSg/x SINE Alu 133 303 -7 22 35 0 0 chr2 83173332 83173361 -170083222 + AT_rich Low_complexity Low_complexity 1 29 0 1543 201 7 0 chr2 83173363 83173642 -170082941 + AluJo SINE Alu 2 282 -30 865 277 41 33 chr2 83173903 83174268 -170082315 - L2 LINE L2 -820 2494 2127 2251 109 3 0 chr2 83175489 83175791 -170080792 - AluSx SINE Alu -9 303 1 897 158 134 0 chr2 83177183 83177347 -170079236 + MER5A DNA MER1_type 4 189 0 2031 100 27 13 chr2 83177689 83177814 -170078769 + AluSg SINE Alu 1 123 -187 516 16 0 0 chr2 83177814 83177875 -170078708 + (CA)n Simple_repeat Simple_repeat 2 62 0 2031 100 27 13 chr2 83177875 83178049 -170078534 + AluSg SINE Alu 123 304 -6 2434 71 0 3 chr2 83178974 83179269 -170077314 - AluY SINE Alu -17 294 1 1860 150 43 9 chr2 83179386 83179733 -170076850 + MER46B DNA MER2_type 2 235 -1 23 33 0 0 chr2 83180246 83180276 -170076307 + AT_rich Low_complexity Low_complexity 1 30 0 3487 113 6 6 chr2 83181185 83181696 -170074887 + MER9 LTR ERVK 1 511 0 599 289 10 101 chr2 83182673 83182903 -170073680 - HERVL LTR ERVL -3077 2408 2218 2499 90 0 0 chr2 83182903 83183215 -170073368 - AluSp SINE Alu -1 312 1 599 289 10 101 chr2 83183215 83183351 -170073232 - HERVL LTR ERVL -3267 2218 2071 22 35 0 0 chr2 83187115 83187144 -170069439 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 83187443 83187465 -170069118 + AT_rich Low_complexity Low_complexity 1 22 0 314 310 107 25 chr2 83190142 83190339 -170066244 - L1ME LINE L1 -333 5829 5617 244 237 17 0 chr2 83190547 83190606 -170065977 - L1ME LINE L1 -594 5576 5517 732 271 190 23 chr2 83190701 83191276 -170065307 - L1ME LINE L1 -747 5399 4729 324 0 0 0 chr2 83191865 83191901 -170064682 + (T)n Simple_repeat Simple_repeat 1 36 0 1645 106 0 0 chr2 83191920 83192128 -170064455 - AluSc SINE Alu -101 208 1 1130 242 25 11 chr2 83192672 83192949 -170063634 - MLT1C LTR MaLR 0 467 187 715 183 0 22 chr2 83192956 83193093 -170063490 - AluJb SINE Alu -4 308 175 855 184 29 17 chr2 83193095 83193269 -170063314 - MLT1C LTR MaLR -287 180 5 3161 102 9 2 chr2 83193276 83193717 -170062866 - MLT2A1 LTR ERVL 0 444 1 226 257 14 14 chr2 83195099 83195169 -170061414 + (CTA)n Simple_repeat Simple_repeat 2 71 0 247 241 11 69 chr2 83195171 83195258 -170061325 - MIR SINE MIR -15 247 166 333 306 62 32 chr2 83195336 83195824 -170060759 - L1MEd LINE L1 -863 1627 1037 282 290 90 0 chr2 83196048 83196148 -170060435 + MIR3 SINE MIR 46 154 -54 277 303 59 34 chr2 83196173 83196292 -170060291 + MIR SINE MIR 25 146 -116 1176 141 32 0 chr2 83196804 83196989 -170059594 - MER20 DNA MER1_type 0 219 29 872 160 19 6 chr2 83197039 83197195 -170059388 - MER3 DNA MER1_type -45 164 7 2401 72 0 3 chr2 83197889 83198193 -170058390 + AluY SINE Alu 1 303 -8 3109 194 87 73 chr2 83198522 83199371 -170057212 + L1M1 LINE L1 16 876 -6689 * 8733 116 18 9 chr2 83199363 83199990 -170056593 + L1M1 LINE L1 1789 2409 -5156 2364 99 0 0 chr2 83199990 83200292 -170056291 + AluSg SINE Alu 1 302 -8 8733 116 18 9 chr2 83200292 83201033 -170055550 + L1M1 LINE L1 2409 3168 -4397 351 229 0 0 chr2 83201550 83201611 -170054972 + MER5A DNA MER1_type 128 188 -1 183 240 20 20 chr2 83201611 83201647 -170054936 + L3 LINE CR1 1173 1208 -369 192 395 92 7 chr2 83203198 83203350 -170053233 + MIR3 SINE MIR 43 207 -1 222 369 36 18 chr2 83204884 83204995 -170051588 - MIR3 SINE MIR -31 177 65 1600 186 93 16 chr2 83206348 83206713 -170049870 + MLT2C1 LTR ERVL 1 393 -4 225 0 0 0 chr2 83206731 83206756 -170049827 + (CA)n Simple_repeat Simple_repeat 2 26 0 692 285 163 5 chr2 83206825 83207046 -170049537 - MIR SINE MIR -5 257 2 220 351 30 22 chr2 83207085 83207219 -170049364 - L2 LINE L2 -807 2507 2373 29 0 0 0 chr2 83207619 83207648 -170048935 + AT_rich Low_complexity Low_complexity 1 29 0 1479 112 5 5 chr2 83207649 83207855 -170048728 - AluSg/x SINE Alu -27 285 80 1381 169 12 4 chr2 83208056 83208304 -170048279 + L1PA16 LINE L1 5908 6157 -9 391 273 71 61 chr2 83208837 83209035 -170047548 - MIR SINE MIR -32 230 31 366 156 393 0 chr2 83209506 83209628 -170046955 + L1MC3 LINE L1 7616 7785 0 1783 220 33 9 chr2 83209662 83210213 -170046370 - L1MC/D LINE L1 -743 5403 5103 323 284 75 8 chr2 83210268 83210402 -170046181 + L2 LINE L2 3171 3313 0 282 309 26 62 chr2 83211023 83211217 -170045366 - MER5A DNA MER1_type -1 188 2 1647 166 4 22 chr2 83211428 83211706 -170044877 - AluJo SINE Alu -39 273 1 2246 120 0 0 chr2 83212583 83212892 -170043691 + AluSg SINE Alu 1 309 -1 209 250 21 21 chr2 83214043 83214091 -170042492 - L2 LINE L2 -24 3248 3201 228 281 55 105 chr2 83214248 83214486 -170042097 + L2 LINE L2 1825 2050 -1264 2099 128 6 6 chr2 83215126 83215438 -170041145 - AluSx SINE Alu 0 312 1 1365 207 118 5 chr2 83215683 83216074 -170040509 + Zaphod DNA AcHobo 3596 4030 -1 1080 207 11 46 chr2 83216304 83216584 -170039999 + L1MA10 LINE L1 6031 6300 -34 415 22 0 233 chr2 83216641 83216731 -170039852 - MADE1 DNA Mariner -11 69 1 1244 107 5 10 chr2 83216862 83217058 -170039525 - L1PB1 LINE L1 0 6151 5957 393 58 0 0 chr2 83217083 83217135 -170039448 + (TG)n Simple_repeat Simple_repeat 1 52 0 1217 251 52 92 chr2 83217308 83217810 -170038773 + LTR40a LTR ERVL 1 482 -37 279 335 108 34 chr2 83218186 83218362 -170038221 - MIR SINE MIR -61 201 13 299 164 73 0 chr2 83218514 83218569 -170038014 - LTR40a LTR ERVL -15 504 446 * 1242 218 19 8 chr2 83218567 83218833 -170037750 - LTR40b LTR ERVL -193 269 1 247 355 113 29 chr2 83220522 83220902 -170035681 + L2 LINE L2 1821 2232 -1082 368 330 124 42 chr2 83221061 83221829 -170034754 + L2 LINE L2 2229 3062 -210 246 306 46 37 chr2 83221887 83221995 -170034588 + MIR SINE MIR 154 262 0 249 256 0 0 chr2 83222302 83222384 -170034199 + (TATG)n Simple_repeat Simple_repeat 1 82 0 2130 214 45 6 chr2 83223023 83223509 -170033074 + MLT1D LTR MaLR 1 505 0 21 36 0 0 chr2 83223512 83223540 -170033043 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 83223799 83223823 -170032760 + AT_rich Low_complexity Low_complexity 1 24 0 26 30 0 0 chr2 83224734 83224767 -170031816 + AT_rich Low_complexity Low_complexity 1 33 0 791 320 66 38 chr2 83225239 83225958 -170030625 - L2 LINE L2 -1 3312 2572 715 277 67 0 chr2 83226052 83226305 -170030278 - L1ME3A LINE L1 -141 6029 5760 1063 280 104 17 chr2 83226305 83226709 -170029874 - L2 LINE L2 -774 2540 2102 183 79 26 53 chr2 83227082 83227120 -170029463 + MIR SINE MIR 226 262 0 2236 125 0 0 chr2 83228467 83228779 -170027804 + AluSq SINE Alu 1 312 -1 33 73 0 0 chr2 83228824 83228892 -170027691 + AT_rich Low_complexity Low_complexity 1 68 0 4202 83 2 2 chr2 83229502 83230056 -170026527 + MER41A LTR ERV1 1 554 0 3268 126 43 7 chr2 83230626 83231217 -170025366 - MER4B LTR ERV1 0 779 1 525 250 0 0 chr2 83232023 83232123 -170024460 + MER58 DNA MER1_type 1 100 -241 337 184 0 23 chr2 83232368 83232455 -170024128 + (TATG)n Simple_repeat Simple_repeat 1 85 0 316 211 29 29 chr2 83232479 83232583 -170024000 + L1M4 LINE L1 3787 3890 -2256 1878 146 10 13 chr2 83232642 83232944 -170023639 - AluSx SINE Alu -11 301 1 428 356 59 13 chr2 83233435 83233623 -170022960 + MIR SINE MIR 13 216 -46 444 19 0 0 chr2 83233623 83233676 -170022907 + (CA)n Simple_repeat Simple_repeat 2 54 0 428 356 59 13 chr2 83233676 83233726 -170022857 + MIR SINE MIR 216 262 0 22 0 0 0 chr2 83234716 83234738 -170021845 + AT_rich Low_complexity Low_complexity 1 22 0 1035 79 0 0 chr2 83235402 83235541 -170021042 + L1PA10 LINE L1 6028 6166 -2 624 151 137 14 chr2 83285575 83285714 -169970869 - THE1C LTR MaLR -219 156 1 680 290 91 9 chr2 83287389 83287620 -169968963 + MIR SINE MIR 13 262 0 210 143 0 0 chr2 83287651 83287686 -169968897 + (CAT)n Simple_repeat Simple_repeat 3 37 0 197 274 150 107 chr2 83287759 83287993 -169968590 + MIR SINE MIR 19 262 0 198 0 0 0 chr2 83288273 83288295 -169968288 + (A)n Simple_repeat Simple_repeat 1 22 0 331 269 44 75 chr2 83289438 83289598 -169966985 - MIR SINE MIR -55 207 53 1905 147 7 19 chr2 83290740 83291047 -169965536 + AluSx SINE Alu 1 303 -9 670 198 12 0 chr2 83291785 83291957 -169964626 + CT-rich Low_complexity Low_complexity 4 177 0 736 264 37 41 chr2 83292110 83292356 -169964227 + MIR SINE MIR 18 262 0 2147 137 13 0 chr2 83293187 83293534 -169963049 - AluSx SINE Alu 0 351 1 2239 99 3 0 chr2 83294101 83294385 -169962198 - AluSc SINE Alu -24 285 1 1886 110 4 4 chr2 83294403 83294658 -169961925 - AluSx SINE Alu -52 260 6 994 135 119 31 chr2 83294661 83294854 -169961729 - AluJo SINE Alu -18 294 85 2371 103 3 0 chr2 83295152 83295463 -169961120 - AluSp SINE Alu -1 312 1 497 301 28 56 chr2 83295816 83296032 -169960551 - MIR SINE MIR -16 246 37 263 146 62 0 chr2 83296052 83296100 -169960483 + MIR SINE MIR 188 238 -24 344 130 14 0 chr2 83296682 83296751 -169959832 + CT-rich Low_complexity Low_complexity 1 70 0 474 110 0 0 chr2 83297310 83297383 -169959200 + AluJ/FRAM SINE Alu 230 302 -10 2666 58 0 0 chr2 83297428 83297738 -169958845 - AluY SINE Alu -1 310 1 292 291 60 40 chr2 83298224 83298375 -169958208 - MIR3 SINE MIR -35 173 20 5189 114 15 1 chr2 83301061 83301877 -169954706 + L1PA8A LINE L1 1 827 -5048 21655 129 11 13 chr2 83301881 83306389 -169950194 + L1PA8A LINE L1 1946 6433 -13 21 0 0 0 chr2 83306389 83306410 -169950173 + AT_rich Low_complexity Low_complexity 1 21 0 30 100 0 0 chr2 83307141 83307241 -169949342 + AT_rich Low_complexity Low_complexity 1 100 0 22 35 0 0 chr2 83307723 83307752 -169948831 + AT_rich Low_complexity Low_complexity 1 29 0 30 27 0 0 chr2 83308246 83308283 -169948300 + AT_rich Low_complexity Low_complexity 1 37 0 221 222 0 48 chr2 83308460 83308523 -169948060 - MIR SINE MIR -43 219 160 416 176 118 25 chr2 83309501 83309620 -169946963 - MSTC LTR MaLR -298 130 1 2264 113 0 10 chr2 83309678 83309988 -169946595 - AluSg SINE Alu -3 307 1 262 324 153 0 chr2 83310048 83310159 -169946424 + MIR SINE MIR 20 147 -115 1308 118 0 0 chr2 83312307 83312510 -169944073 + L1MA3 LINE L1 6103 6305 0 23 0 0 0 chr2 83312510 83312533 -169944050 + AT_rich Low_complexity Low_complexity 1 23 0 248 321 45 18 chr2 83313788 83313900 -169942683 + MIR SINE MIR 1 115 -147 2347 104 0 0 chr2 83314169 83314478 -169942105 - AluSg SINE Alu -1 309 1 789 248 64 0 chr2 83314479 83314681 -169941902 - MER58A DNA MER1_type -9 215 1 287 380 60 41 chr2 83314691 83315104 -169941479 + L2 LINE L2 2433 2853 -461 420 286 134 37 chr2 83315107 83315488 -169941095 - LTR16B LTR ERVL 0 464 47 352 335 118 59 chr2 83316649 83317283 -169939300 + L2 LINE L2 2562 3264 -8 23 54 0 0 chr2 83318150 83318187 -169938396 + AT_rich Low_complexity Low_complexity 1 37 0 207 0 0 0 chr2 83319445 83319468 -169937115 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 351 361 57 9 chr2 83319589 83319819 -169936764 + MIR SINE MIR 2 242 -20 21 0 0 0 chr2 83320377 83320398 -169936185 + AT_rich Low_complexity Low_complexity 1 21 0 313 349 47 0 chr2 83322459 83322588 -169933995 - L2 LINE L2 -2 3311 3177 383 213 37 9 chr2 83322683 83322791 -169933792 - MLT1K LTR MaLR -27 561 451 207 0 0 0 chr2 83325400 83325423 -169931160 + (CA)n Simple_repeat Simple_repeat 2 24 0 326 221 11 0 chr2 83325423 83325518 -169931065 + (TATATG)n Simple_repeat Simple_repeat 1 96 0 180 0 0 0 chr2 83325593 83325613 -169930970 + (T)n Simple_repeat Simple_repeat 1 20 0 357 255 96 0 chr2 83325711 83325805 -169930778 + L2 LINE L2 3169 3271 -1 214 377 0 0 chr2 83327086 83327155 -169929428 + MIR SINE MIR 37 105 -103 2426 113 0 0 chr2 83327683 83327993 -169928590 + AluSg SINE Alu 1 310 0 248 258 184 49 chr2 83329340 83329503 -169927080 + MIR3 SINE MIR 8 192 -16 352 188 145 0 chr2 83330733 83330802 -169925781 - AluJ SINE Alu -25 277 199 1065 153 0 24 chr2 83330803 83330973 -169925610 - AluJ SINE Alu -146 166 1 234 0 0 0 chr2 83332002 83332028 -169924555 + (T)n Simple_repeat Simple_repeat 1 26 0 206 263 228 18 chr2 83332117 83332231 -169924352 - L3 LINE CR1 -3 1574 1437 230 347 20 41 chr2 83332299 83332397 -169924186 + MIR SINE MIR 53 148 -114 430 282 124 50 chr2 83332403 83332885 -169923698 + LTR33 LTR ERVL 1 518 -3 548 321 83 21 chr2 83333093 83333333 -169923250 - L3 LINE CR1 -304 1273 1019 1855 175 47 76 chr2 83333397 83333912 -169922671 + MLT1D LTR MaLR 6 505 0 246 420 51 0 chr2 83333923 83334180 -169922403 - L3 LINE CR1 -756 821 552 656 159 62 55 chr2 83334209 83334354 -169922229 - AluJb SINE Alu -5 307 162 2712 29 0 0 chr2 83336700 83337008 -169919575 + AluY SINE Alu 1 308 -3 32 57 0 0 chr2 83337533 83337586 -169918997 + AT_rich Low_complexity Low_complexity 1 53 0 192 237 0 34 chr2 83337631 83337690 -169918893 - L2 LINE L2 -1063 2251 2195 454 262 73 31 chr2 83337994 83338107 -169918476 - L1ME4a LINE L1 -56 6065 5958 318 26 0 0 chr2 83338107 83338146 -169918437 + (CA)n Simple_repeat Simple_repeat 2 40 0 454 262 73 31 chr2 83338146 83338318 -169918265 - L1ME4a LINE L1 -163 5958 5768 498 33 0 0 chr2 83339333 83339393 -169917190 + (TCCCC)n Simple_repeat Simple_repeat 5 64 0 481 133 0 92 chr2 83339393 83339491 -169917092 - AluY SINE Alu -17 294 206 1290 236 231 40 chr2 83339900 83340520 -169916063 - LTR41 LTR ERVL -12 761 24 398 338 127 42 chr2 83340619 83341069 -169915514 - L2 LINE L2 -340 2974 2487 642 281 37 37 chr2 83341107 83341353 -169915230 + MIR SINE MIR 2 247 -15 205 284 78 29 chr2 83341953 83342055 -169914528 + L2 LINE L2 3166 3272 0 2311 60 0 0 chr2 83342066 83342375 -169914208 - AluY SINE Alu 0 309 1 575 317 6 11 chr2 83343171 83343351 -169913232 - MIR SINE MIR -56 206 28 393 89 30 40 chr2 83343690 83343791 -169912792 + (TCTA)n Simple_repeat Simple_repeat 1 100 0 289 328 5 15 chr2 83346764 83346877 -169909706 + G-rich Low_complexity Low_complexity 1 193 0 1918 108 58 71 chr2 83346926 83347305 -169909278 - THE1C LTR MaLR -1 374 1 236 276 52 0 chr2 83347544 83347602 -169908981 - L2 LINE L2 -5 3267 3207 1461 215 18 24 chr2 83347792 83348122 -169908461 - MLT2B3 LTR ERVL -226 328 1 281 272 25 0 chr2 83348162 83348243 -169908340 - L2 LINE L2 -1047 2267 2185 269 219 86 38 chr2 83348325 83348430 -169908153 - L1ME4a LINE L1 -38 6083 5974 238 250 94 52 chr2 83348456 83348648 -169907935 - L1ME4a LINE L1 -201 5920 5721 200 330 51 34 chr2 83349534 83349652 -169906931 + MIR3 SINE MIR 8 127 -81 254 283 87 29 chr2 83349662 83349835 -169906748 - L2 LINE L2 -10 3303 3121 1235 188 44 58 chr2 83349972 83350265 -169906318 + AluJo SINE Alu 1 289 -23 654 309 116 50 chr2 83354854 83355576 -169901007 - L2 LINE L2 -1 3312 2534 377 281 37 44 chr2 83355805 83355940 -169900643 + MIR SINE MIR 92 225 -37 1762 193 0 7 chr2 83357138 83357434 -169899149 - AluJb SINE Alu -18 294 1 334 252 0 81 chr2 83357529 83357640 -169898943 + MER58 DNA MER1_type 4 105 -236 21 0 0 0 chr2 83357725 83357746 -169898837 + AT_rich Low_complexity Low_complexity 1 21 0 238 197 248 17 chr2 83358544 83358661 -169897922 - L2 LINE L2 -7 3306 3163 277 264 104 60 chr2 83359009 83359191 -169897392 - L2 LINE L2 -571 2743 2554 896 71 0 8 chr2 83359318 83359444 -169897139 + (GAA)n Simple_repeat Simple_repeat 2 126 0 213 355 26 0 chr2 83359493 83359569 -169897014 - L2 LINE L2 -978 2336 2259 223 226 65 129 chr2 83360105 83360260 -169896323 - L2 LINE L2 -551 2763 2619 303 351 63 31 chr2 83360515 83360706 -169895877 + L3 LINE CR1 1380 1576 -1 209 191 0 0 chr2 83360769 83360811 -169895772 + (TCTG)n Simple_repeat Simple_repeat 3 44 0 1801 209 11 0 chr2 83362360 83362719 -169893864 + MLT1A1 LTR MaLR 3 365 0 295 279 110 0 chr2 83363744 83363896 -169892687 - MIR SINE MIR -6 256 83 199 286 132 63 chr2 83366127 83366316 -169890267 + L2 LINE L2 2512 2713 -601 346 314 0 0 chr2 83366318 83366442 -169890141 + AluJb SINE Alu 1 124 -178 1322 136 0 47 chr2 83366543 83366756 -169889827 - AluSx SINE Alu -109 203 1 550 207 93 0 chr2 83366758 83366908 -169889675 + L1 LINE L1 1734 1897 -4892 285 200 12 0 chr2 83366922 83367002 -169889581 + L1 LINE L1 5268 5348 -1440 2124 129 0 0 chr2 83367002 83367288 -169889295 + AluSx SINE Alu 1 286 -26 23 0 0 0 chr2 83367982 83368005 -169888578 + AT_rich Low_complexity Low_complexity 1 23 0 26 74 0 0 chr2 83368156 83368210 -169888373 + AT_rich Low_complexity Low_complexity 1 54 0 371 250 57 47 chr2 83368270 83368482 -169888101 - L1ME LINE L1 -319 5802 5589 24 32 0 0 chr2 83368642 83368673 -169887910 + AT_rich Low_complexity Low_complexity 1 31 0 401 245 43 0 chr2 83368814 83368908 -169887675 + MIR SINE MIR 45 142 -66 2069 104 0 11 chr2 83370394 83370705 -169885878 - AluSx SINE Alu 0 317 10 441 229 34 8 chr2 83370705 83370823 -169885760 + L1MD3 LINE L1 7868 7988 -7 2314 93 0 0 chr2 83371154 83371443 -169885140 + AluSq SINE Alu 1 289 -24 326 312 83 99 chr2 83371986 83372441 -169884142 + L2 LINE L2 2825 3272 0 2843 146 27 1 chr2 83372460 83373370 -169883213 + L1P4 LINE L1 4750 5683 -478 225 327 234 10 chr2 83373503 83373708 -169882875 - MIR SINE MIR 0 262 12 658 220 156 0 chr2 83374431 83374604 -169881979 - MER58A DNA MER1_type -1 223 24 563 167 9 0 chr2 83374780 83374888 -169881695 - L1MB7 LINE L1 -8 6176 6068 199 291 29 10 chr2 83375259 83375362 -169881221 - L2 LINE L2 -275 2997 2893 303 71 0 0 chr2 83375603 83375645 -169880938 + (TTTTA)n Simple_repeat Simple_repeat 2 43 0 1968 137 7 0 chr2 83375649 83375933 -169880650 - AluSx SINE Alu -25 287 2 250 227 0 0 chr2 83375981 83376025 -169880558 + MER5B DNA MER1_type 5 48 -130 181 283 19 19 chr2 83376069 83376122 -169880461 - MER5B DNA MER1_type -124 54 2 1650 188 0 33 chr2 83377527 83377830 -169878753 - AluJo SINE Alu -18 294 2 2313 64 0 0 chr2 83378298 83378629 -169877954 - AluY SINE Alu 0 332 2 589 186 51 8 chr2 83378790 83378908 -169877675 - MIR SINE MIR -29 233 111 218 347 0 0 chr2 83379205 83379280 -169877303 - L2 LINE L2 -1 3312 3238 414 292 42 0 chr2 83381073 83381193 -169875390 + MIR3 SINE MIR 37 161 -47 239 331 138 75 chr2 83381244 83381564 -169875019 + L2 LINE L2 2933 3272 0 193 357 48 12 chr2 83381579 83381663 -169874920 + L2 LINE L2 3168 3254 -18 1849 156 7 0 chr2 83381978 83382292 -169874291 + AluJo SINE Alu 1 316 0 320 237 32 43 chr2 83383108 83383201 -169873382 + L2 LINE L2 3179 3270 -2 1945 143 0 0 chr2 83384112 83384384 -169872199 - AluSq SINE Alu -41 272 1 304 279 48 10 chr2 83384958 83385062 -169871521 + MIR SINE MIR 30 137 -71 583 282 43 5 chr2 83385068 83385256 -169871327 + MIR SINE MIR 32 226 -36 2042 158 0 0 chr2 83385399 83385697 -169870886 + AluSx SINE Alu 1 298 -14 1501 156 11 4 chr2 83386349 83386619 -169869964 + MER47A DNA MER2_type 4 275 -91 212 75 0 25 chr2 83387217 83387257 -169869326 + (GTTTG)n Simple_repeat Simple_repeat 1 39 0 1889 102 4 0 chr2 83387263 83387507 -169869076 - AluSp SINE Alu -68 245 1 193 295 152 9 chr2 83389224 83389336 -169867247 - MIR SINE MIR -41 221 94 787 253 106 17 chr2 83389454 83389858 -169866725 - MER113 DNA MER1_type? -44 477 38 443 252 46 8 chr2 83390455 83390586 -169865997 + MER69A DNA AcHobo 20 155 -22 441 157 81 0 chr2 83391847 83391962 -169864621 + L1MC4 LINE L1 6241 6359 0 540 347 79 1 chr2 83391965 83392206 -169864377 + MIR SINE MIR 15 262 0 227 241 95 78 chr2 83392764 83392880 -169863703 + MIR SINE MIR 28 145 -63 241 91 455 0 chr2 83392986 83393041 -169863542 - MADE1 DNA Mariner 0 80 1 2357 93 0 0 chr2 83393563 83393864 -169862719 + AluSx SINE Alu 1 301 -11 307 316 166 5 chr2 83393869 83394056 -169862527 + MIR SINE MIR 35 251 -11 211 314 14 0 chr2 83394978 83395048 -169861535 + CT-rich Low_complexity Low_complexity 4 74 0 538 221 35 0 chr2 83395713 83395826 -169860757 - MER5C DNA MER1_type -204 120 4 484 139 70 15 chr2 83395857 83395969 -169860614 + L1MA9 LINE L1 5907 6019 -281 21 36 0 0 chr2 83396287 83396315 -169860268 + AT_rich Low_complexity Low_complexity 1 28 0 1988 132 0 21 chr2 83396955 83397363 -169859220 - AluSx SINE Alu 0 402 1 383 251 142 90 chr2 83397701 83397912 -169858671 - L3 LINE CR1 -13 1564 1343 333 360 67 0 chr2 83397975 83398153 -169858430 + L2 LINE L2 2555 2744 -570 2504 194 54 2 chr2 83398254 83398806 -169857777 + L1MB5 LINE L1 5594 6174 0 249 217 0 101 chr2 83398853 83398922 -169857661 - MLT1I LTR MaLR -124 285 224 608 138 0 60 chr2 83399133 83399249 -169857334 + AluJb SINE Alu 25 133 -179 365 322 69 23 chr2 83399544 83399718 -169856865 - MIR SINE MIR -79 183 2 401 269 113 16 chr2 83402060 83402246 -169854337 - MIR SINE MIR -25 237 34 308 302 183 51 chr2 83402301 83402536 -169854047 - MLT1H1 LTR MaLR -13 582 317 366 229 44 16 chr2 83402576 83402730 -169853853 - MLT1H1 LTR MaLR -365 184 29 1371 165 23 0 chr2 83404181 83404442 -169852141 - MER65A LTR ERV1 0 445 179 219 44 67 0 chr2 83404515 83404560 -169852023 + T-rich Low_complexity Low_complexity 2 49 0 675 243 0 6 chr2 83404560 83404733 -169851850 - MER65A LTR ERV1 -273 172 1 289 148 0 159 chr2 83404735 83404823 -169851760 + MIR SINE MIR 82 155 -107 766 231 151 83 chr2 83405213 83405645 -169850938 - L2 LINE L2 0 3313 2853 4311 185 32 21 chr2 83405903 83406757 -169849826 - MER21B LTR ERV1 0 863 1 423 149 0 0 chr2 83407781 83407855 -169848728 + (CA)n Simple_repeat Simple_repeat 2 75 0 741 198 44 6 chr2 83407902 83408084 -169848499 + MER20 DNA MER1_type 14 202 -17 512 299 71 19 chr2 83409417 83409628 -169846955 - MIR SINE MIR -19 243 22 1571 212 10 0 chr2 83409701 83409993 -169846590 + AluJo SINE Alu 1 295 -17 232 337 12 0 chr2 83410545 83410631 -169845952 + MIR3 SINE MIR 114 200 -8 287 305 130 26 chr2 83412439 83412593 -169843990 + MIR SINE MIR 20 189 -73 1019 176 0 0 chr2 83412627 83412792 -169843791 - AluJb SINE Alu -3 309 145 437 130 70 26 chr2 83412792 83413023 -169843560 + (TA)n Simple_repeat Simple_repeat 1 241 0 360 64 0 0 chr2 83413053 83413100 -169843483 + (CA)n Simple_repeat Simple_repeat 2 48 0 246 163 0 0 chr2 83413102 83413145 -169843438 - Alu SINE Alu -173 129 87 246 174 23 12 chr2 83413701 83413787 -169842796 + (TA)n Simple_repeat Simple_repeat 1 87 0 35 63 0 0 chr2 83413804 83413867 -169842716 + AT_rich Low_complexity Low_complexity 1 63 0 549 309 116 40 chr2 83413878 83414250 -169842333 - L2 LINE L2 -77 3236 2837 223 340 28 35 chr2 83415319 83415460 -169841123 + L2 LINE L2 2620 2759 -555 989 165 115 10 chr2 83415469 83415669 -169840914 + MER58A DNA MER1_type 2 222 -2 241 272 58 29 chr2 83416016 83416119 -169840464 + L2 LINE L2 3203 3308 -5 439 271 41 23 chr2 83417964 83418116 -169838467 + MIR SINE MIR 36 188 -55 225 331 289 0 chr2 83418724 83418845 -169837738 + MIR SINE MIR 16 171 -91 282 56 0 0 chr2 83419036 83419072 -169837511 + (TG)n Simple_repeat Simple_repeat 2 37 0 360 283 121 24 chr2 83419096 83419262 -169837321 - MIR SINE MIR -28 234 53 1812 130 3 62 chr2 83419911 83420218 -169836365 + AluJb SINE Alu 1 289 -23 606 257 25 7 chr2 83421015 83421217 -169835366 + MIR SINE MIR 10 262 0 3800 50 8 4 chr2 83421289 83421812 -169834771 - L1P LINE L1 -2435 3711 3187 372 220 37 164 chr2 83421986 83422200 -169834383 + MIR SINE MIR 76 262 0 214 83 0 104 chr2 83424436 83424484 -169832099 + (TTTTG)n Simple_repeat Simple_repeat 4 46 0 1579 163 7 53 chr2 83424490 83424791 -169831792 - AluJb SINE Alu -25 287 1 1669 167 7 27 chr2 83426103 83426396 -169830187 + AluJo SINE Alu 1 287 -25 186 220 99 77 chr2 83427084 83427175 -169829408 + L2 LINE L2 1913 2005 -1309 409 184 21 43 chr2 83427875 83428016 -169828567 + A-rich Low_complexity Low_complexity 4 141 0 201 121 0 0 chr2 83430227 83430260 -169826323 + (TCCA)n Simple_repeat Simple_repeat 4 36 0 277 218 307 0 chr2 83430268 83430369 -169826214 - L2 LINE L2 0 3313 3182 369 369 27 19 chr2 83430504 83430764 -169825819 - L2 LINE L2 -643 2671 2410 216 297 14 27 chr2 83433189 83433263 -169823320 + MIR3 SINE MIR 11 83 -125 216 0 0 0 chr2 83433662 83433686 -169822897 + (CAG)n Simple_repeat Simple_repeat 2 25 0 191 329 110 58 chr2 83434247 83434402 -169822181 + MIR SINE MIR 20 182 -80 323 258 65 0 chr2 83434684 83434777 -169821806 + MER103 DNA DNA 57 155 -11 467 311 122 11 chr2 83435048 83435228 -169821355 - MIR SINE MIR -6 256 57 321 26 0 0 chr2 83435246 83435284 -169821299 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 2025 114 19 0 chr2 83435294 83435565 -169821018 - AluSg SINE Alu -30 280 5 260 372 0 0 chr2 83435842 83435920 -169820663 + MER91A DNA MER1_type 119 196 0 304 329 0 0 chr2 83436958 83437034 -169819549 - MIR SINE MIR -136 126 51 432 57 0 0 chr2 83437077 83437130 -169819453 - AluSp SINE Alu -197 116 64 322 310 35 0 chr2 83437705 83437818 -169818765 + MIR SINE MIR 91 207 -55 540 296 41 6 chr2 83439207 83439376 -169817207 + MIR SINE MIR 32 206 -56 24 32 0 0 chr2 83440158 83440189 -169816394 + AT_rich Low_complexity Low_complexity 1 31 0 273 29 0 0 chr2 83440291 83440325 -169816258 + (TG)n Simple_repeat Simple_repeat 2 35 0 201 111 56 0 chr2 83440325 83440361 -169816222 + (CAGAGA)n Simple_repeat Simple_repeat 1 38 0 402 318 60 60 chr2 83440456 83440673 -169815910 + MIR SINE MIR 21 237 -25 1507 184 64 0 chr2 83440907 83441174 -169815409 - AluJo SINE Alu -26 286 3 335 125 56 14 chr2 83441250 83441322 -169815261 + MADE1 DNA Mariner 1 75 -5 181 56 28 28 chr2 83442204 83442240 -169814343 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 278 387 81 0 chr2 83442607 83442793 -169813790 + L2 LINE L2 3070 3270 -2 1153 217 5 9 chr2 83443063 83443284 -169813299 - MER58A DNA MER1_type -3 221 2 1687 178 17 20 chr2 83443461 83443753 -169812830 + AluJo SINE Alu 6 296 -16 283 340 53 33 chr2 83444470 83444620 -169811963 - MIR3 SINE MIR -11 197 45 24 67 0 0 chr2 83444752 83444797 -169811786 + AT_rich Low_complexity Low_complexity 1 45 0 315 275 29 101 chr2 83447742 83447880 -169808703 + L2 LINE L2 3185 3312 -1 332 303 0 0 chr2 83447974 83448063 -169808520 + L1MC4 LINE L1 6615 6703 -1339 186 133 0 0 chr2 83448064 83448094 -169808489 + (TA)n Simple_repeat Simple_repeat 1 30 0 620 209 22 14 chr2 83448108 83448247 -169808336 - MER5B DNA MER1_type -30 148 9 268 290 76 35 chr2 83448424 83448569 -169808014 + MIR SINE MIR 68 218 -44 21 36 0 0 chr2 83448569 83448597 -169807986 + AT_rich Low_complexity Low_complexity 1 28 0 382 297 123 0 chr2 83448930 83449068 -169807515 - MER63A DNA MER1_type -5 205 51 2315 88 0 16 chr2 83449068 83449374 -169807209 + AluY SINE Alu 1 301 -10 2028 143 3 20 chr2 83449467 83449817 -169806766 - MER2 DNA MER2_type 0 344 1 2190 105 0 56 chr2 83451567 83451891 -169804692 - AluJb SINE Alu -4 308 3 1275 121 105 8 chr2 83452170 83452418 -169804165 - L1MA8 LINE L1 -3 6288 6017 341 382 21 0 chr2 83452797 83452983 -169803600 - L2 LINE L2 -18 3295 3106 694 191 14 21 chr2 83453057 83453198 -169803385 + FLAM_C SINE Alu 1 140 -3 227 339 90 28 chr2 83453283 83453460 -169803123 - L2 LINE L2 -394 2920 2733 198 270 202 0 chr2 83454281 83454370 -169802213 - L2 LINE L2 -15 3298 3192 2610 43 0 0 chr2 83454379 83454682 -169801901 + AluY SINE Alu 1 303 -8 333 325 46 7 chr2 83454900 83455051 -169801532 - L2 LINE L2 -193 3079 2923 1677 211 88 77 chr2 83455052 83455920 -169800663 - LTR1B LTR ERV1 -1 1019 1 924 276 61 49 chr2 83456443 83456871 -169799712 - L2 LINE L2 -49 3264 2832 245 278 37 65 chr2 83457233 83457341 -169799242 - MIR3 SINE MIR -1 207 103 638 295 94 85 chr2 83457445 83458201 -169798382 - L2 LINE L2 -15 3298 2537 1890 155 0 19 chr2 83458259 83458575 -169798008 + AluJo SINE Alu 2 311 -1 1527 228 79 45 chr2 83459109 83459592 -169796991 + MLT1D LTR MaLR 7 505 0 204 135 0 0 chr2 83459713 83459750 -169796833 + (CTA)n Simple_repeat Simple_repeat 2 38 0 197 238 24 0 chr2 83459754 83459796 -169796787 - MIR SINE MIR -18 244 202 198 0 0 0 chr2 83460214 83460236 -169796347 + (T)n Simple_repeat Simple_repeat 1 22 0 467 310 106 4 chr2 83461301 83461735 -169794848 + L1ME LINE L1 5212 5704 -417 2011 132 53 31 chr2 83461854 83462210 -169794373 - THE1B LTR MaLR 0 364 1 2334 97 3 0 chr2 83463444 83463744 -169792839 + AluSc SINE Alu 1 301 -8 1603 158 16 54 chr2 83463856 83464172 -169792411 + AluJb SINE Alu 3 306 -6 425 352 70 25 chr2 83464317 83464757 -169791826 + L1MC4a LINE L1 4782 5241 -905 1077 256 42 94 chr2 83464843 83464918 -169791665 + L1MC4a LINE L1 5327 5404 -2404 2296 105 0 0 chr2 83464918 83465223 -169791360 - AluSx SINE Alu -3 309 5 1077 256 42 94 chr2 83465223 83465806 -169790777 + L1MC4a LINE L1 5404 5951 -1857 459 328 37 5 chr2 83465809 83465998 -169790585 + MIR SINE MIR 40 234 -28 394 367 41 14 chr2 83466377 83466595 -169789988 + L3 LINE CR1 246 469 -1108 1779 161 3 46 chr2 83466888 83467211 -169789372 + AluJo SINE Alu 4 312 0 327 25 0 0 chr2 83467383 83467423 -169789160 + (TG)n Simple_repeat Simple_repeat 1 40 0 270 0 0 0 chr2 83467422 83467452 -169789131 + (GA)n Simple_repeat Simple_repeat 1 30 0 * 284 204 151 11 chr2 83468210 83468303 -169788280 + MIR SINE MIR 156 261 -1 1074 82 0 0 chr2 83469012 83469147 -169787436 + AluSq/x SINE Alu 1 135 -178 1905 105 36 11 chr2 83469147 83469457 -169787126 + AluSx SINE Alu 1 317 0 401 245 43 0 chr2 83470931 83471025 -169785558 - MIR SINE MIR -66 142 45 24 32 0 0 chr2 83471166 83471197 -169785386 + AT_rich Low_complexity Low_complexity 1 31 0 371 250 57 47 chr2 83471357 83471569 -169785014 + L1ME LINE L1 5589 5802 -319 26 74 0 0 chr2 83471629 83471683 -169784900 + AT_rich Low_complexity Low_complexity 1 54 0 23 0 0 0 chr2 83471834 83471857 -169784726 + AT_rich Low_complexity Low_complexity 1 23 0 2199 142 0 0 chr2 83472528 83472838 -169783745 - AluSx SINE Alu -2 310 1 210 91 0 0 chr2 83472846 83472879 -169783704 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 23 33 0 0 chr2 83472971 83473001 -169783582 + AT_rich Low_complexity Low_complexity 1 30 0 304 300 140 0 chr2 83473106 83473256 -169783327 + MER117 DNA MER1_type 1 171 -26 260 71 71 0 chr2 83473537 83473593 -169782990 + CT-rich Low_complexity Low_complexity 1 60 0 1130 117 6 0 chr2 83473593 83473772 -169782811 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2215 100 14 0 chr2 83473780 83474071 -169782512 - AluSx SINE Alu -17 295 1 243 366 97 1 chr2 83474189 83474336 -169782247 - MIR SINE MIR -60 148 23 207 171 0 0 chr2 83474472 83474507 -169782076 + (TG)n Simple_repeat Simple_repeat 1 35 0 592 262 141 51 chr2 83475557 83475889 -169780694 - MLT1H1 LTR MaLR -197 358 10 337 238 164 8 chr2 83477373 83477495 -169779088 - MIR SINE MIR -74 188 48 934 174 28 0 chr2 83477499 83477677 -169778906 - MER20 DNA MER1_type -36 183 1 816 211 14 14 chr2 83477766 83477974 -169778609 - MER3 DNA MER1_type -1 208 1 603 207 62 11 chr2 83478676 83478699 -169777884 + MER53 DNA DNA 1 21 -168 198 0 0 0 chr2 83478699 83478721 -169777862 + (CAA)n Simple_repeat Simple_repeat 2 23 0 603 207 62 11 chr2 83478721 83478876 -169777707 + MER53 DNA DNA 21 188 -1 227 352 63 42 chr2 83479114 83479256 -169777327 - L2 LINE L2 -5 3267 3123 184 292 0 0 chr2 83479605 83479653 -169776930 - L2 LINE L2 -569 2745 2698 340 280 145 47 chr2 83479794 83480008 -169776575 + MIR SINE MIR 2 236 -26 1503 171 0 81 chr2 83481264 83481599 -169774984 - AluJb SINE Alu 0 310 1 207 342 44 9 chr2 83482672 83482786 -169773797 - MIR3 SINE MIR -4 204 87 267 188 188 0 chr2 83483979 83484043 -169772540 - MIR SINE MIR -90 172 97 192 143 191 95 chr2 83484198 83484261 -169772322 - MER5A DNA MER1_type -80 109 41 23 33 0 0 chr2 83485522 83485552 -169771031 + AT_rich Low_complexity Low_complexity 1 30 0 1527 179 7 14 chr2 83485597 83485882 -169770701 - AluJo SINE Alu -9 303 21 377 310 96 36 chr2 83486031 83486334 -169770249 + MER102b DNA MER1_type 20 340 -1 821 275 102 71 chr2 83486544 83487024 -169769559 - MLT1J LTR MaLR -12 499 5 220 243 54 43 chr2 83488870 83488974 -169767609 - MIR SINE MIR -35 173 64 259 304 98 0 chr2 83489256 83489358 -169767225 - MIR3 SINE MIR -4 204 93 245 152 76 76 chr2 83489903 83489969 -169766614 + L2 LINE L2 3248 3313 0 549 296 156 15 chr2 83491379 83491713 -169764870 + LTR16A LTR ERVL 61 441 -9 270 187 49 81 chr2 83491735 83491858 -169764725 + L1ME4a LINE L1 5798 5916 -205 222 156 0 0 chr2 83492396 83492441 -169764142 + (TGAA)n Simple_repeat Simple_repeat 4 48 0 237 243 0 0 chr2 83492917 83492987 -169763596 - L1MB4 LINE L1 -2 6178 6109 2575 56 0 0 chr2 83493276 83493578 -169763005 - AluY SINE Alu -9 302 1 293 291 35 12 chr2 83493751 83493837 -169762746 + polypyrimidine Low_complexity Low_complexity 4 91 0 414 316 21 37 chr2 83494781 83494968 -169761615 - MER5A DNA MER1_type -4 185 2 571 302 81 54 chr2 83495015 83495498 -169761085 - MLT1H LTR MaLR -53 496 1 2246 97 17 0 chr2 83495937 83496225 -169760358 - AluSc SINE Alu -16 293 1 562 227 23 30 chr2 83496620 83496752 -169759831 + MLT1F LTR MaLR 1 131 -411 339 185 0 0 chr2 83496753 83496818 -169759765 - L1MA8 LINE L1 -978 5168 5104 * 6268 118 18 24 chr2 83496811 83497904 -169758679 + L1MA8 LINE L1 5163 6249 -42 23 33 0 0 chr2 83497970 83498000 -169758583 + AT_rich Low_complexity Low_complexity 1 30 0 2003 207 17 15 chr2 83498262 83498672 -169757911 + MLT1F LTR MaLR 130 540 -2 1689 221 33 41 chr2 83499515 83499965 -169756618 - MLT2B2 LTR ERVL 0 444 1 3818 184 45 8 chr2 83499965 83500700 -169755883 - ERVL-B2 LTR ERVL -7 5757 4996 1708 245 59 36 chr2 83500906 83501014 -169755569 - MLT1D LTR MaLR 0 505 401 1821 127 3 38 chr2 83501014 83501305 -169755278 + AluJb SINE Alu 16 296 -16 1708 245 59 36 chr2 83501305 83501690 -169754893 - MLT1D LTR MaLR -104 401 1 1678 247 67 27 chr2 83503763 83504285 -169752298 - LTR55 LTR ERV -5 543 1 369 0 0 0 chr2 83504304 83504345 -169752238 + (CA)n Simple_repeat Simple_repeat 1 41 0 377 265 105 6 chr2 83504353 83504515 -169752068 - L1ME4a LINE L1 -201 5920 5743 207 200 0 0 chr2 83505617 83505662 -169750921 + T-rich Low_complexity Low_complexity 1 45 0 701 267 71 25 chr2 83505869 83506109 -169750474 + MIR SINE MIR 2 252 -10 345 279 36 6 chr2 83506118 83506283 -169750300 + (CATATA)n Simple_repeat Simple_repeat 4 173 0 259 249 11 28 chr2 83506217 83506398 -169750185 + (TAA)n Simple_repeat Simple_repeat 3 180 0 * 1750 186 0 13 chr2 83506844 83507156 -169749427 - AluJo SINE Alu -4 308 1 1663 94 21 26 chr2 83507406 83507640 -169748943 + AluY SINE Alu 70 302 -9 1304 231 22 43 chr2 83507647 83508015 -169748568 + L1ME1 LINE L1 5454 5813 -351 804 153 0 0 chr2 83508040 83508158 -169748425 + FLAM_C SINE Alu 1 118 -25 233 73 0 24 chr2 83508161 83508202 -169748381 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 809 245 66 92 chr2 83508202 83508551 -169748032 + L1ME1 LINE L1 5824 6164 -19 181 301 82 14 chr2 83508685 83508758 -169747825 - L2 LINE L2 -2 3270 3193 202 269 292 6 chr2 83508864 83509035 -169747548 - L2 LINE L2 -166 3106 2887 240 93 37 19 chr2 83509291 83509345 -169747238 + T-rich Low_complexity Low_complexity 1 55 0 2190 60 7 4 chr2 83510106 83510489 -169746094 + AluY SINE Alu 1 384 0 971 251 16 0 chr2 83510752 83510999 -169745584 + L1M4 LINE L1 4642 4892 -1254 594 283 6 0 chr2 83511006 83511172 -169745411 + L1M4 LINE L1 4957 5123 -1023 231 36 0 0 chr2 83511522 83511550 -169745033 + (A)n Simple_repeat Simple_repeat 1 28 0 255 61 0 0 chr2 83512058 83512091 -169744492 + (TCCC)n Simple_repeat Simple_repeat 4 36 0 290 165 13 0 chr2 83512305 83512384 -169744199 + CT-rich Low_complexity Low_complexity 1 80 0 229 267 13 67 chr2 83512905 83512980 -169743603 + L2 LINE L2 3202 3272 0 468 328 38 60 chr2 83514794 83515059 -169741524 - L3 LINE CR1 -1 1576 1318 613 332 87 13 chr2 83515667 83516047 -169740536 - MLT1I LTR MaLR 0 409 2 377 288 109 96 chr2 83516312 83516708 -169739875 + L3 LINE CR1 585 985 -592 223 365 78 17 chr2 83517108 83517223 -169739360 + MIR SINE MIR 8 129 -133 514 253 167 0 chr2 83518220 83518370 -169738213 - MER5A DNA MER1_type -6 183 9 189 107 0 0 chr2 83518433 83518461 -169738122 + (TC)n Simple_repeat Simple_repeat 2 29 0 202 336 50 21 chr2 83518787 83518927 -169737656 - MIR SINE MIR 0 262 119 537 68 0 0 chr2 83520720 83520794 -169735789 + (TG)n Simple_repeat Simple_repeat 1 74 0 215 363 169 0 chr2 83521262 83521422 -169735161 + L3 LINE CR1 1390 1576 -1 45130 40 1 1 chr2 83523575 83529728 -169726855 - L1PA4 LINE L1 0 6155 1 199 294 0 0 chr2 83529759 83529810 -169726773 + L3 LINE CR1 328 378 -1199 626 309 129 21 chr2 83529865 83530244 -169726339 + L3 LINE CR1 964 1383 -194 199 295 66 66 chr2 83530414 83530842 -169725741 - MER5A DNA MER1_type -34 155 34 252 240 93 78 chr2 83530427 83530500 -169726083 + MER5A DNA MER1_type 58 135 -54 2179 121 0 13 chr2 83530500 83530807 -169725776 - AluSx SINE Alu -9 303 1 252 240 93 78 chr2 83530807 83530862 -169725721 + MER5A DNA MER1_type 135 188 -1 329 206 0 0 chr2 83532429 83532492 -169724091 - LTR53 LTR ERVL -11 508 446 190 223 72 127 chr2 83532577 83532743 -169723840 + L2 LINE L2 3156 3312 -1 2024 123 3 11 chr2 83533068 83533385 -169723198 - AluSx SINE Alu 0 315 1 1382 241 43 61 chr2 83533703 83534098 -169722485 - MLT1B LTR MaLR -2 388 1 189 0 0 0 chr2 83534296 83534317 -169722266 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2074 103 4 0 chr2 83534320 83534591 -169721992 - AluSx SINE Alu -24 288 17 221 291 121 43 chr2 83534645 83534786 -169721797 + MIR SINE MIR 105 256 -6 1731 132 26 59 chr2 83536015 83536319 -169720264 + AluJo SINE Alu 1 294 -18 2746 162 219 113 chr2 83537642 83538562 -169718021 + LTR28 LTR ERV1 1 1017 -3 424 311 60 0 chr2 83539009 83539192 -169717391 - MER117 DNA MER1_type 0 197 4 2060 99 3 14 chr2 83539752 83540067 -169716516 + AluSc SINE Alu 1 312 0 496 326 40 11 chr2 83540544 83540719 -169715864 + MER91B DNA MER1_type 2 181 -9 200 294 71 47 chr2 83540934 83541019 -169715564 - MIR SINE MIR -156 106 20 3123 82 0 8 chr2 83541432 83541810 -169714773 - THE1C LTR MaLR 0 375 1 266 250 181 28 chr2 83541938 83542082 -169714501 + MIR3 SINE MIR 12 177 -31 1695 168 49 11 chr2 83542115 83542401 -169714182 - AluJo SINE Alu -15 297 1 283 299 36 58 chr2 83542486 83542623 -169713960 - L2 LINE L2 0 3272 3139 611 229 69 17 chr2 83542733 83542908 -169713675 + MER58 DNA MER1_type 26 209 -2211 180 179 0 0 chr2 83543063 83543102 -169713481 + (CAT)n Simple_repeat Simple_repeat 1 39 0 1463 161 9 5 chr2 83544066 83544289 -169712294 + MER58A DNA MER1_type 1 224 0 194 306 0 0 chr2 83544727 83544776 -169711807 - L3b LINE CR1 -250 1333 1285 254 326 108 39 chr2 83546392 83546521 -169710062 + MIR SINE MIR 11 148 -114 995 223 5 29 chr2 83546634 83546840 -169709743 - MER58A DNA MER1_type -15 209 9 256 292 0 0 chr2 83547050 83547115 -169709468 + (TG)n Simple_repeat Simple_repeat 2 66 0 306 0 0 0 chr2 83547476 83547510 -169709073 + (TG)n Simple_repeat Simple_repeat 2 35 0 318 26 0 0 chr2 83548022 83548061 -169708522 + (TG)n Simple_repeat Simple_repeat 2 40 0 299 289 199 24 chr2 83548464 83548630 -169707953 - MIR SINE MIR -53 209 15 299 276 207 0 chr2 83549630 83549775 -169706808 - MLT1L LTR MaLR -88 527 353 462 267 37 52 chr2 83551818 83552009 -169704574 + MIR SINE MIR 49 236 -26 223 361 56 0 chr2 83552100 83552208 -169704375 - MIR3 SINE MIR -6 202 89 191 233 111 78 chr2 83552645 83552735 -169703848 - MER5A DNA MER1_type -28 161 69 583 201 11 0 chr2 83552754 83552928 -169703655 + CT-rich Low_complexity Low_complexity 1 176 0 364 324 80 0 chr2 83554898 83555074 -169701509 - MIR SINE MIR -39 223 34 458 280 24 24 chr2 83556119 83556287 -169700296 - MER117 DNA MER1_type -29 168 1 240 328 48 16 chr2 83556480 83556605 -169699978 + MIR SINE MIR 128 256 -6 192 40 0 0 chr2 83557033 83557058 -169699525 + (TC)n Simple_repeat Simple_repeat 2 26 0 699 142 0 0 chr2 83557158 83557278 -169699305 + (TCCC)n Simple_repeat Simple_repeat 1 120 0 810 253 182 60 chr2 83559638 83560022 -169696561 - LTR16B LTR ERVL -32 432 2 353 337 77 6 chr2 83560175 83560356 -169696227 - MIR SINE MIR -3 259 66 637 217 148 15 chr2 83561540 83561619 -169694964 + L1MD3 LINE L1 7765 7832 -163 1883 142 0 4 chr2 83561619 83561923 -169694660 - AluSx SINE Alu 0 312 10 637 217 148 15 chr2 83561923 83562045 -169694538 + L1MD3 LINE L1 7832 7994 -1 2318 93 0 0 chr2 83562372 83562661 -169693922 + AluSq SINE Alu 1 289 -24 315 200 38 76 chr2 83563264 83563369 -169693214 + L1MC5 LINE L1 7811 7911 -50 320 81 54 40 chr2 83563440 83563503 -169693080 - LTR37A LTR ERV1 0 426 363 1822 161 64 92 chr2 83563503 83563969 -169692614 + MLT1C LTR MaLR 1 453 -14 221 0 35 0 chr2 83563972 83564001 -169692582 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 1355 211 54 23 chr2 83564001 83564351 -169692232 - LTR37A LTR ERV1 -65 361 1 491 249 64 29 chr2 83564463 83564636 -169691947 + MIR SINE MIR 84 262 0 185 279 0 0 chr2 83566234 83566277 -169690306 - L2 LINE L2 -31 3241 3199 191 339 103 40 chr2 83566527 83566751 -169689832 + MIR SINE MIR 2 239 -23 346 253 50 0 chr2 83566836 83566935 -169689648 + MIR3 SINE MIR 64 167 -41 382 320 8 0 chr2 83567860 83567982 -169688601 + L3 LINE CR1 1332 1454 -123 221 317 48 19 chr2 83568750 83568854 -169687729 + L2 LINE L2 2687 2793 -521 646 240 0 20 chr2 83568917 83569063 -169687520 + MIR SINE MIR 86 228 -34 239 330 38 38 chr2 83569086 83569192 -169687391 + L2 LINE L2 3137 3242 -30 * 359 321 82 8 chr2 83569190 83569324 -169687259 + MIR SINE MIR 9 152 -110 189 0 0 0 chr2 83571613 83571634 -169684949 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 4345 148 62 57 chr2 83572215 83572994 -169683589 + LTR39 LTR ERV1 1 783 0 1596 69 0 25 chr2 83573222 83573424 -169683159 - MER107 DNA MER1_type 0 197 1 789 93 9 9 chr2 83573491 83573599 -169682984 - MER107 DNA MER1_type -89 108 1 1391 200 38 7 chr2 83573870 83574160 -169682423 - L1MA7 LINE L1 -2 6289 5991 239 239 0 102 chr2 83575365 83575402 -169681181 - L2 LINE L2 -6 3307 3283 1416 174 5 0 chr2 83575402 83575620 -169680963 - MER20 DNA MER1_type 0 219 1 239 239 0 102 chr2 83575620 83575670 -169680913 - L2 LINE L2 -30 3283 3229 275 170 0 0 chr2 83575897 83575944 -169680639 - L2 LINE L2 -2 3311 3265 921 266 148 36 chr2 83576450 83576931 -169679652 + MLT1G1 LTR MaLR 6 585 -10 1834 80 3 145 chr2 83577286 83577509 -169679074 - AluSx SINE Alu 0 312 59 423 0 0 0 chr2 83577509 83577556 -169679027 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2178 120 0 0 chr2 83577556 83577839 -169678744 - AluSx SINE Alu -29 283 1 1834 80 3 145 chr2 83577839 83577952 -169678631 - AluSx SINE Alu -251 61 23 1519 184 0 37 chr2 83579589 83579888 -169676695 - AluJo SINE Alu 0 312 25 192 107 0 0 chr2 83580031 83580059 -169676524 + L2 LINE L2 3009 3036 -236 378 0 0 0 chr2 83580348 83580390 -169676193 + (CA)n Simple_repeat Simple_repeat 1 42 0 598 301 36 15 chr2 83584491 83584687 -169671896 + MIR SINE MIR 59 258 -4 288 269 50 71 chr2 83585183 83585365 -169671218 - MLT1I LTR MaLR 0 409 232 1562 206 86 3 chr2 83585372 83585756 -169670827 - Charlie1 DNA MER1_type 0 2761 2346 299 275 14 0 chr2 83585758 83585827 -169670756 - Charlie1 DNA MER1_type -2691 70 1 318 291 12 0 chr2 83585893 83585979 -169670604 - MLT1J1 LTR MaLR -290 156 70 614 191 184 7 chr2 83586538 83586685 -169669898 - MER5A DNA MER1_type -8 181 9 399 192 0 26 chr2 83588810 83588888 -169667695 - Charlie2 DNA MER1_type 0 2862 2787 1960 171 55 76 chr2 83588897 83589201 -169667382 - L1MD1 LINE L1 -19 6617 6308 2404 93 0 7 chr2 83589201 83589503 -169667080 + AluY SINE Alu 1 300 -11 1960 171 55 76 chr2 83589503 83590156 -169666427 - L1MD1 LINE L1 -328 6308 5708 1536 89 21 0 chr2 83590156 83590347 -169666236 - AluSx SINE Alu -117 195 1 4091 244 63 15 chr2 83590348 83591623 -169664960 - L1MD1 LINE L1 -936 5604 4269 1609 136 110 8 chr2 83591625 83591889 -169664694 - AluSx SINE Alu -21 291 1 24 0 0 0 chr2 83591900 83591924 -169664659 + AT_rich Low_complexity Low_complexity 1 24 0 342 300 0 9 chr2 83593792 83593902 -169662681 - L1MD1 LINE L1 -2275 4265 4157 4867 204 40 70 chr2 83593911 83596125 -169660458 - L1MD1 LINE L1 -3228 3312 1176 1359 268 149 2 chr2 83596204 83596626 -169659957 - L1MD1 LINE L1 -5764 776 293 2430 208 79 94 chr2 83596639 83597447 -169659136 + MER21B LTR ERV1 1 796 -67 836 175 180 19 chr2 83597470 83597681 -169658902 - L1MD1 LINE L1 -6244 296 52 363 98 0 0 chr2 83597704 83597755 -169658828 + MADE1 DNA Mariner 30 80 0 272 258 47 16 chr2 83597830 83597958 -169658625 - Charlie2a DNA MER1_type -1854 1008 877 239 279 72 9 chr2 83597955 83598066 -169658517 - Charlie2a DNA MER1_type -2545 317 200 * 499 256 0 118 chr2 83599218 83599413 -169657170 + MER5B DNA MER1_type 2 173 -5 823 283 29 0 chr2 83599500 83599740 -169656843 + MER115 DNA AcHobo 5 251 -442 562 211 55 80 chr2 83599945 83600144 -169656439 + MER115 DNA AcHobo 500 693 0 496 294 25 78 chr2 83600373 83600618 -169655965 + MIR SINE MIR 25 256 -6 354 23 0 0 chr2 83600763 83600806 -169655777 + (TC)n Simple_repeat Simple_repeat 2 44 0 255 31 0 0 chr2 83600805 83600837 -169655746 + (TG)n Simple_repeat Simple_repeat 1 32 0 * 218 344 86 0 chr2 83601143 83601236 -169655347 + L2 LINE L2 3167 3267 -5 211 143 24 24 chr2 83601336 83601378 -169655205 + (TGAA)n Simple_repeat Simple_repeat 2 43 0 206 273 73 0 chr2 83601452 83601507 -169655076 + MIR SINE MIR 106 164 -98 598 242 66 44 chr2 83602241 83602468 -169654115 - MLT1J LTR MaLR -275 236 5 582 232 155 7 chr2 83603057 83603145 -169653438 + MER5A DNA MER1_type 9 83 -106 2578 182 13 17 chr2 83603145 83603612 -169652971 - MLT1C LTR MaLR 0 467 3 582 232 155 7 chr2 83603612 83603678 -169652905 + MER5A DNA MER1_type 83 186 -3 234 258 16 16 chr2 83603801 83603863 -169652720 + L2 LINE L2 3210 3271 -1 352 313 125 25 chr2 83603968 83604208 -169652375 - LTR41 LTR ERVL 0 773 510 688 238 43 16 chr2 83604464 83604649 -169651934 - LTR41 LTR ERVL -583 190 1 451 363 135 26 chr2 83605180 83606006 -169650577 + L2 LINE L2 2311 3228 -44 220 86 29 0 chr2 83606078 83606113 -169650470 - L2 LINE L2 -6 3307 3272 1979 175 70 34 chr2 83606167 83606707 -169649876 - MLT2A2 LTR ERVL 0 554 1 33994 94 25 24 chr2 83606707 83609939 -169646644 - HERVL-A2 LTR ERVL 0 5654 2427 2516 75 0 0 chr2 83609939 83610246 -169646337 - AluY SINE Alu -4 307 1 33994 94 25 24 chr2 83610246 83611738 -169644845 - HERVL-A2 LTR ERVL -3227 2427 734 180 258 0 112 chr2 83611738 83611827 -169644756 - MER5A DNA MER1_type -95 94 16 33994 94 25 24 chr2 83611827 83612562 -169644021 - HERVL-A2 LTR ERVL -4920 734 1 1886 174 92 43 chr2 83612562 83613098 -169643485 - MLT2A2 LTR ERVL 0 554 1 400 298 42 68 chr2 83613109 83613418 -169643165 - L2 LINE L2 -115 3198 2898 225 289 36 24 chr2 83613794 83613877 -169642706 - MIR3 SINE MIR -21 187 104 234 0 0 0 chr2 83614458 83614484 -169642099 + (TG)n Simple_repeat Simple_repeat 2 27 0 345 289 35 14 chr2 83614494 83614636 -169641947 - MARNA DNA Mariner -191 395 251 198 0 0 0 chr2 83614638 83614660 -169641923 + (TAA)n Simple_repeat Simple_repeat 3 24 0 363 319 25 12 chr2 83614678 83614838 -169641745 + MARNA DNA Mariner 399 560 -26 1662 234 87 35 chr2 83615558 83616085 -169640498 - MLT1F1 LTR MaLR -15 552 6 288 276 20 31 chr2 83616141 83616239 -169640344 + MER103 DNA DNA 59 155 -11 2116 195 54 15 chr2 83618983 83619449 -169637134 - MLT1D LTR MaLR 0 505 22 2215 110 7 7 chr2 83619517 83619826 -169636757 - AluSx SINE Alu -3 309 1 200 106 21 43 chr2 83620321 83620368 -169636215 + (CAAAAA)n Simple_repeat Simple_repeat 3 48 0 712 166 29 7 chr2 83620718 83620857 -169635726 - LTR32 LTR ERVL -11 460 319 225 182 73 0 chr2 83620859 83620914 -169635669 - LTR32 LTR ERVL -103 368 310 2004 166 22 0 chr2 83620914 83621234 -169635349 - LTR32 LTR ERVL -125 346 20 216 349 0 0 chr2 83621937 83622000 -169634583 - L2 LINE L2 -2 3270 3208 218 244 77 39 chr2 83622687 83622765 -169633818 - MIR3 SINE MIR -3 205 125 1978 110 48 3 chr2 83623091 83623382 -169633201 - AluSg SINE Alu -3 307 4 387 256 104 15 chr2 83624025 83624195 -169632388 - MIR SINE MIR -35 173 4 201 342 8 17 chr2 83624195 83624306 -169632277 + MIR3 SINE MIR 75 184 -24 42 20 0 0 chr2 83625301 83625350 -169631233 + AT_rich Low_complexity Low_complexity 1 49 0 232 171 0 0 chr2 83625405 83625446 -169631137 + L1MC4 LINE L1 6658 6698 -1344 203 309 128 0 chr2 83625591 83625685 -169630898 + L2 LINE L2 3199 3304 -9 500 183 12 0 chr2 83626372 83626454 -169630129 + AluJ/FLAM SINE Alu 2 84 -228 416 274 214 28 chr2 83627280 83627532 -169629051 + L2 LINE L2 2576 2874 -440 319 277 57 21 chr2 83627702 83627843 -169628740 + L2 LINE L2 3116 3261 -52 382 303 118 18 chr2 83627952 83628181 -169628402 - MIR SINE MIR 0 262 13 2301 123 0 0 chr2 83629473 83629783 -169626800 + AluSg SINE Alu 1 310 0 345 345 125 22 chr2 83630742 83630974 -169625609 - MIR SINE MIR -6 256 1 2126 117 0 0 chr2 83631092 83631406 -169625177 - AluSg SINE Alu 0 314 1 1154 193 93 60 chr2 83631515 83631847 -169624736 + MER2 DNA MER2_type 1 343 -1 2557 64 0 6 chr2 83631936 83632247 -169624336 - AluY SINE Alu -2 309 1 184 325 25 131 chr2 83632862 83633022 -169623561 - L2 LINE L2 -91 3181 3039 22 35 0 0 chr2 83633204 83633233 -169623350 + AT_rich Low_complexity Low_complexity 1 29 0 2281 138 25 19 chr2 83633402 83633764 -169622819 - THE1B LTR MaLR 0 364 1 12661 95 2 1 chr2 83633764 83635342 -169621241 - THE1B-int LTR MaLR 0 1580 1 2220 144 22 33 chr2 83635342 83635710 -169620873 - THE1B LTR MaLR 0 364 1 490 304 162 37 chr2 83638132 83638596 -169617987 - L2 LINE L2 -875 2439 1918 281 132 0 19 chr2 83638897 83638950 -169617633 + (TAGA)n Simple_repeat Simple_repeat 4 55 0 2010 120 36 7 chr2 83639762 83640063 -169616520 - AluSx SINE Alu -2 310 1 335 89 18 0 chr2 83640164 83640220 -169616363 + (CA)n Simple_repeat Simple_repeat 1 57 0 261 299 55 8 chr2 83640438 83640565 -169616018 - L1ME4a LINE L1 -3 6118 5986 41180 70 5 9 chr2 83640786 83646951 -169609632 - L1PA5 LINE L1 0 6154 19 1278 205 92 21 chr2 83647005 83647332 -169609251 + MLT1A1 LTR MaLR 11 360 -5 1924 151 20 0 chr2 83647412 83647704 -169608879 - AluSx SINE Alu -14 298 1 449 280 8 17 chr2 83647916 83648052 -169608531 + MIR SINE MIR 31 145 -63 974 251 32 0 chr2 83649070 83649321 -169607262 + MIR SINE MIR 2 260 -2 194 33 67 0 chr2 83649654 83649684 -169606899 + GA-rich Low_complexity Low_complexity 2 33 0 23 54 0 0 chr2 83649972 83650009 -169606574 + AT_rich Low_complexity Low_complexity 1 37 0 192 93 37 19 chr2 83650545 83650599 -169605984 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 908 135 23 0 chr2 83651012 83651145 -169605438 + AluJo SINE Alu 1 136 -176 2060 113 0 3 chr2 83651435 83651755 -169604828 - AluSx SINE Alu 0 319 1 22 0 0 0 chr2 83652944 83652966 -169603617 + AT_rich Low_complexity Low_complexity 1 22 0 390 346 0 39 chr2 83653054 83653184 -169603399 - MIR3 SINE MIR -78 130 6 1912 87 4 0 chr2 83653904 83654146 -169602437 - AluSp SINE Alu -70 243 1 2304 107 0 3 chr2 83655008 83655317 -169601266 - AluY SINE Alu -3 308 1 199 356 20 40 chr2 83655567 83655716 -169600867 - L3 LINE CR1 -412 1165 1020 203 299 26 13 chr2 83657113 83657190 -169599393 - MER91B DNA MER1_type -112 78 1 228 247 53 80 chr2 83657834 83657984 -169598599 - MIR SINE MIR 0 262 117 1989 218 0 19 chr2 83658737 83659109 -169597474 - MLT1A1 LTR MaLR 0 365 1 242 122 0 0 chr2 83659118 83659159 -169597424 + MER7A DNA MER2_type 59 97 -249 1855 224 83 42 chr2 83659803 83660365 -169596218 - MER21B LTR ERV1 -136 727 98 1778 169 47 12 chr2 83660473 83660793 -169595790 + MER7A DNA MER2_type 18 346 0 810 183 0 0 chr2 83660825 83660962 -169595621 - FLAM_C SINE Alu 0 143 7 277 309 145 38 chr2 83661214 83661476 -169595107 + MLT1K LTR MaLR 281 570 -18 252 0 0 0 chr2 83661531 83661559 -169595024 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 1903 124 0 50 chr2 83661561 83661859 -169594724 - AluSx SINE Alu -29 283 1 4946 162 41 15 chr2 83662028 83662903 -169593680 + MER4D LTR ERV1 1 898 -5 396 55 0 0 chr2 83662906 83662961 -169593622 + (T)n Simple_repeat Simple_repeat 1 55 0 1822 119 58 0 chr2 83664623 83664883 -169591700 - AluSx SINE Alu -16 296 22 589 240 97 36 chr2 83665371 83665567 -169591016 - MER58A DNA MER1_type 0 224 17 4072 98 6 6 chr2 83666380 83666928 -169589655 - L1PA14 LINE L1 -3 6158 5611 414 228 0 0 chr2 83667139 83667218 -169589365 - MLT1J1 LTR MaLR -359 87 9 254 254 0 0 chr2 83667881 83667936 -169588647 + Tigger5 DNA MER2_type 1 55 -2268 489 176 12 0 chr2 83667946 83668031 -169588552 + Tigger5 DNA MER2_type 2237 2322 -1 219 272 12 12 chr2 83669924 83670005 -169586578 + (TG)n Simple_repeat Simple_repeat 2 82 0 1407 158 110 47 chr2 83670021 83670202 -169586381 - MER44D DNA MER2_type -1882 609 441 2375 81 0 0 chr2 83670202 83670522 -169586061 + AluSq SINE Alu 1 320 0 1407 158 110 47 chr2 83670522 83670656 -169585927 - MER44D DNA MER2_type -2050 441 3 449 124 0 11 chr2 83672111 83672200 -169584383 + (TCTA)n Simple_repeat Simple_repeat 3 90 0 2069 218 60 63 chr2 83673837 83674502 -169582081 - L1ME1 LINE L1 -5 6161 5499 554 111 0 12 chr2 83675197 83675278 -169581305 - MADE1 DNA Mariner 0 80 1 2327 77 37 0 chr2 83676367 83676666 -169579917 - AluY SINE Alu -1 310 1 211 371 0 10 chr2 83677910 83678007 -169578576 + MIR3 SINE MIR 113 208 0 21 0 0 0 chr2 83679403 83679424 -169577159 + AT_rich Low_complexity Low_complexity 1 21 0 409 278 96 21 chr2 83680053 83680240 -169576343 - MIR SINE MIR -12 250 50 207 0 0 0 chr2 83680755 83680778 -169575805 + (GA)n Simple_repeat Simple_repeat 1 23 0 * 270 0 0 0 chr2 83680777 83680807 -169575776 + (TG)n Simple_repeat Simple_repeat 2 31 0 447 290 136 42 chr2 83680823 83681154 -169575429 - L2 LINE L2 -967 2347 1986 412 260 62 14 chr2 83681324 83681470 -169575113 + MIR3 SINE MIR 54 206 -2 188 100 0 33 chr2 83682699 83682729 -169573854 + MIR SINE MIR 94 122 -140 * 284 388 7 20 chr2 83682706 83682853 -169573730 + L2 LINE L2 3127 3271 -1 286 353 29 7 chr2 83683719 83683858 -169572725 + MIR3 SINE MIR 29 170 -38 200 281 167 21 chr2 83684338 83684434 -169572149 + MIR SINE MIR 34 143 -65 249 284 30 0 chr2 83685396 83685463 -169571120 - MIR SINE MIR -93 115 47 208 225 0 84 chr2 83685820 83685891 -169570692 - MIR SINE MIR -74 188 124 263 291 45 30 chr2 83687145 83687279 -169569304 - L3 LINE CR1 -41 1536 1401 200 119 0 24 chr2 83687809 83687851 -169568732 + (TA)n Simple_repeat Simple_repeat 2 42 0 462 257 0 0 chr2 83688531 83688632 -169567951 + MER91B DNA MER1_type 7 107 -83 470 299 64 36 chr2 83690535 83690786 -169565797 - MIR SINE MIR 0 262 5 310 308 37 9 chr2 83691468 83691575 -169565008 - L2 LINE L2 -15 3257 3148 454 263 130 50 chr2 83692613 83693073 -169563510 - L1ME4a LINE L1 -9 6112 5616 201 243 0 0 chr2 83693473 83693543 -169563040 + (TAA)n Simple_repeat Simple_repeat 2 71 0 228 163 0 0 chr2 83693841 83693884 -169562699 - MIR SINE MIR -66 142 100 2033 131 0 7 chr2 83693910 83694207 -169562376 - AluSx SINE Alu -17 295 1 551 236 29 36 chr2 83694216 83694356 -169562227 - MER3 DNA MER1_type -70 139 1 2275 108 0 0 chr2 83695549 83695846 -169560737 - AluSx SINE Alu -15 297 1 182 306 88 74 chr2 83695848 83696064 -169560519 - L2 LINE L2 -569 2745 2527 306 297 68 17 chr2 83696406 83696524 -169560059 + MER5A DNA MER1_type 42 165 -24 864 193 83 0 chr2 83697448 83697629 -169558954 + MER105 DNA DNA 3 198 -6 254 319 41 128 chr2 83698036 83698302 -169558281 - L2 LINE L2 -32 3240 2998 292 238 16 0 chr2 83698948 83699011 -169557572 - MIR SINE MIR -115 147 84 2414 126 41 16 chr2 83699703 83700069 -169556514 + THE1C LTR MaLR 1 375 0 317 250 0 0 chr2 83700740 83700808 -169555775 + Charlie8 DNA MER1_type 1349 1416 -1001 25 31 0 0 chr2 83701335 83701367 -169555216 + AT_rich Low_complexity Low_complexity 1 32 0 25 0 0 0 chr2 83701411 83701436 -169555147 + AT_rich Low_complexity Low_complexity 1 25 0 2506 57 0 3 chr2 83701992 83702292 -169554291 - AluY SINE Alu -12 299 1 803 199 74 0 chr2 83703224 83703400 -169553183 - MER53 DNA DNA 0 189 1 34 0 0 0 chr2 83703709 83703743 -169552840 + AT_rich Low_complexity Low_complexity 1 34 0 1488 272 114 27 chr2 83703789 83704608 -169551975 + L2 LINE L2 2414 3313 0 258 32 0 0 chr2 83706270 83706301 -169550282 + (GA)n Simple_repeat Simple_repeat 2 32 0 451 231 16 115 chr2 83706756 83706938 -169549645 - MER21B LTR ERV1 -130 733 570 1191 279 80 69 chr2 83706976 83707001 -169549582 - MER21B LTR ERV1 -150 713 690 2247 141 36 113 chr2 83707001 83707469 -169549114 - MSTB1 LTR MaLR 0 432 1 1191 279 80 69 chr2 83707469 83708019 -169548564 - MER21B LTR ERV1 -173 690 132 180 0 0 0 chr2 83708123 83708143 -169548440 + (A)n Simple_repeat Simple_repeat 1 20 0 249 365 47 7 chr2 83708281 83708429 -169548154 - L3 LINE CR1 -112 1465 1312 497 323 91 9 chr2 83708580 83708812 -169547771 + MIR SINE MIR 12 262 0 607 271 158 22 chr2 83708850 83709123 -169547460 - MLT1H LTR MaLR -23 526 217 993 229 14 14 chr2 83709331 83709545 -169547038 + AluJb SINE Alu 78 291 -21 333 0 0 0 chr2 83709619 83709656 -169546927 + (TG)n Simple_repeat Simple_repeat 1 37 0 264 271 0 35 chr2 83710016 83710101 -169546482 + MIR3 SINE MIR 125 206 -2 218 286 103 56 chr2 83710494 83710620 -169545963 + MIR SINE MIR 76 207 -55 1292 224 0 0 chr2 83711175 83711403 -169545180 + Tigger7 DNA MER2_type 7 234 -471 499 220 10 30 chr2 83711404 83711504 -169545079 + Tigger7 DNA MER2_type 2382 2479 -8 613 206 89 11 chr2 83713038 83713218 -169543365 - L1MC5 LINE L1 -51 7910 7717 237 114 68 0 chr2 83713539 83713583 -169543000 + MST-int LTR MaLR 436 482 -1169 589 234 60 53 chr2 83713652 83713917 -169542666 + L1MC5 LINE L1 7403 7669 -292 578 134 151 0 chr2 83713895 83714014 -169542569 + L1MA5 LINE L1 6164 6300 0 * 329 284 46 0 chr2 83714372 83714481 -169542102 + GA-rich Low_complexity Low_complexity 5 118 0 183 364 59 17 chr2 83717369 83717487 -169539096 + L2 LINE L2 3096 3218 -54 384 332 130 5 chr2 83718115 83718323 -169538260 - MIR SINE MIR -1 261 28 29 0 0 0 chr2 83719774 83719803 -169536780 + AT_rich Low_complexity Low_complexity 1 29 0 228 298 76 47 chr2 83720154 83720325 -169536258 - MIR SINE MIR -7 255 80 332 299 71 58 chr2 83720612 83720766 -169535817 - MIR SINE MIR -41 221 66 700 176 23 60 chr2 83721103 83721344 -169535239 - MER106B DNA MER1_type 0 1059 1 225 196 0 0 chr2 83721373 83721424 -169535159 + GA-rich Low_complexity Low_complexity 3 53 0 273 290 20 30 chr2 83721910 83722010 -169534573 - MIR SINE MIR -70 138 40 614 243 114 35 chr2 83722738 83722940 -169533643 - MIR SINE MIR -10 252 35 294 253 44 76 chr2 83722963 83723121 -169533462 + MIR SINE MIR 85 237 -25 34 0 0 0 chr2 83723587 83723621 -169532962 + AT_rich Low_complexity Low_complexity 1 34 0 290 320 77 22 chr2 83724672 83724885 -169531698 + MIR SINE MIR 17 243 -19 904 186 17 17 chr2 83725154 83725207 -169531376 + MER5B DNA MER1_type 1 53 -125 183 42 0 0 chr2 83725207 83725231 -169531352 + (TAA)n Simple_repeat Simple_repeat 2 25 0 904 186 17 17 chr2 83725231 83725354 -169531229 + MER5B DNA MER1_type 52 177 -1 367 278 24 16 chr2 83725569 83725695 -169530888 + CT-rich Low_complexity Low_complexity 1 127 0 214 411 48 0 chr2 83726176 83726344 -169530239 - MIR3 SINE MIR -13 195 20 918 112 0 15 chr2 83726625 83726759 -169529824 - L1MA2 LINE L1 0 6304 6173 1023 213 19 19 chr2 83727258 83727474 -169529109 - MER20 DNA MER1_type 0 219 4 378 261 70 0 chr2 83727876 83727991 -169528592 + MIR SINE MIR 58 180 -82 207 188 0 0 chr2 83728527 83728575 -169528008 + (TG)n Simple_repeat Simple_repeat 1 48 0 248 282 24 0 chr2 83728589 83728674 -169527909 + (TA)n Simple_repeat Simple_repeat 1 87 0 450 0 0 0 chr2 83730847 83730897 -169525686 + (TG)n Simple_repeat Simple_repeat 2 51 0 21 71 0 0 chr2 83732453 83732495 -169524088 + AT_rich Low_complexity Low_complexity 1 42 0 201 132 73 15 chr2 83735174 83735242 -169521341 + (CGGG)n Simple_repeat Simple_repeat 4 75 0 207 0 0 0 chr2 83735471 83735494 -169521089 + (A)n Simple_repeat Simple_repeat 1 23 0 416 237 72 36 chr2 83736785 83736924 -169519659 - MIR3 SINE MIR -3 205 62 694 89 18 9 chr2 83736924 83737036 -169519547 + (TTTC)n Simple_repeat Simple_repeat 3 115 0 197 33 33 0 chr2 83737605 83737635 -169518948 + (TA)n Simple_repeat Simple_repeat 2 32 0 31 44 0 0 chr2 83739299 83739344 -169517239 + AT_rich Low_complexity Low_complexity 1 45 0 2311 99 0 29 chr2 83739359 83739672 -169516911 + AluSx SINE Alu 3 306 -6 269 275 197 8 chr2 83740060 83740203 -169516380 + MIR SINE MIR 37 206 -56 1249 92 0 0 chr2 83740257 83740420 -169516163 - AluSg/x SINE Alu -15 297 135 384 195 126 11 chr2 83740505 83740592 -169515991 + MER5A DNA MER1_type 9 105 -84 191 235 44 29 chr2 83740678 83740746 -169515837 - MIR SINE MIR -102 160 92 2140 82 0 4 chr2 83741282 83741550 -169515033 + AluSx SINE Alu 34 300 -12 428 280 116 53 chr2 83741653 83741878 -169514705 - L1ME LINE L1 -359 5762 5542 2884 151 14 63 chr2 83742639 83743223 -169513360 - LTR10A LTR ERV1 -54 555 1 280 146 21 0 chr2 83745511 83745559 -169511024 + MIR SINE MIR 64 112 -150 667 243 80 121 chr2 83745832 83746313 -169510270 - MLT1H LTR MaLR -22 527 22 551 221 131 0 chr2 83746442 83746587 -169509996 + MER5A DNA MER1_type 26 189 0 608 358 94 10 chr2 83747343 83747745 -169508838 - L2 LINE L2 -10 3262 2827 299 297 103 13 chr2 83747849 83748004 -169508579 - MIR SINE MIR -19 243 75 190 385 46 15 chr2 83748642 83748772 -169507811 - L2 LINE L2 -3 3269 3136 277 233 12 47 chr2 83749040 83749126 -169507457 + MIR3 SINE MIR 126 208 0 443 265 54 46 chr2 83751247 83751507 -169505076 - L1MC5 LINE L1 -186 7775 7514 243 0 0 0 chr2 83752486 83752513 -169504070 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 24 32 0 0 chr2 83753115 83753146 -169503437 + GC_rich Low_complexity Low_complexity 1 31 0 301 297 164 16 chr2 83753779 83753907 -169502676 - MER5B DNA MER1_type -42 147 1 248 240 40 0 chr2 83754034 83754084 -169502499 - L2 LINE L2 -16 3256 3205 210 224 0 0 chr2 83754206 83754255 -169502328 + CT-rich Low_complexity Low_complexity 3 51 0 691 326 109 21 chr2 83755196 83755696 -169500887 + L2 LINE L2 2741 3313 0 487 305 9 94 chr2 83756331 83756544 -169500039 - MIR3 SINE MIR -3 205 11 505 143 112 0 chr2 83759269 83759367 -169497216 - Tigger3(Golem) DNA MER2_type 0 3038 2930 349 250 0 48 chr2 83759498 83759582 -169497001 - Tigger3(Golem) DNA MER2_type -2949 80 1 265 357 10 0 chr2 83760728 83760826 -169495757 - MIR SINE MIR -13 249 151 188 336 121 9 chr2 83760819 83760935 -169495648 - L2 LINE L2 -4 3309 3181 * 23 0 0 0 chr2 83761076 83761099 -169495484 + AT_rich Low_complexity Low_complexity 1 23 0 1365 212 38 16 chr2 83763402 83763718 -169492865 + MER58B DNA MER1_type 19 341 0 1734 137 41 0 chr2 83764208 83764479 -169492104 - AluSx SINE Alu -30 282 1 215 343 131 51 chr2 83764530 83764999 -169491584 + L2 LINE L2 2381 2902 -412 654 185 7 15 chr2 83764999 83765134 -169491449 + MER94 DNA DNA 1 134 0 215 343 131 51 chr2 83765134 83765215 -169491368 + L2 LINE L2 2902 2975 -339 370 253 53 0 chr2 83765348 83765443 -169491140 + MER81 DNA DNA 1 100 -14 352 358 0 0 chr2 83765457 83765566 -169491017 + L2 LINE L2 3164 3272 0 386 295 41 8 chr2 83766415 83766537 -169490046 - MIR SINE MIR -63 145 20 237 254 95 41 chr2 83766551 83766620 -169489963 - L1MC4 LINE L1 -1 8041 7977 1264 205 137 3 chr2 83766620 83766942 -169489641 - MLT1A1 LTR MaLR 0 365 1 237 254 95 41 chr2 83766942 83767041 -169489542 - L1MC4 LINE L1 -65 7977 7864 2265 100 0 7 chr2 83767618 83767928 -169488655 + AluSc SINE Alu 1 308 -1 2109 134 3 0 chr2 83768534 83768832 -169487751 - AluSx SINE Alu -13 299 1 219 69 0 0 chr2 83768832 83768861 -169487722 + (T)n Simple_repeat Simple_repeat 1 29 0 186 133 0 0 chr2 83769718 83769748 -169486835 + (TG)n Simple_repeat Simple_repeat 2 31 0 2358 244 57 32 chr2 83771294 83771977 -169484606 - MER21B LTR ERV1 -145 718 19 4006 180 29 13 chr2 83771992 83772827 -169483756 + L1MB8 LINE L1 5331 6178 0 1684 200 72 25 chr2 83773316 83773762 -169482821 - MLT1C LTR MaLR 0 467 1 3333 264 100 29 chr2 83774385 83775054 -169481529 + L2 LINE L2 1644 2264 -1049 1679 167 0 4 chr2 83775054 83775329 -169481254 - AluJb SINE Alu -38 274 1 3333 264 100 29 chr2 83775329 83776226 -169480357 + L2 LINE L2 2264 3311 -2 2304 141 67 12 chr2 83776713 83777117 -169479466 - MSTB LTR MaLR 0 426 1 336 222 25 12 chr2 83778237 83778318 -169478265 + MER5A DNA MER1_type 9 90 -99 196 324 27 14 chr2 83778262 83778336 -169478247 - MER5A DNA MER1_type -23 166 92 * 195 42 0 0 chr2 83778372 83778396 -169478187 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 510 244 17 50 chr2 83778420 83778600 -169477983 - MER5B DNA MER1_type -3 175 2 289 295 74 95 chr2 83778931 83779121 -169477462 - MIR SINE MIR -71 191 6 580 212 9 0 chr2 83780249 83780362 -169476221 - FLAM_C SINE Alu -29 114 1 281 308 39 8 chr2 83780714 83780844 -169475739 - MER20B DNA MER1_type -607 176 43 184 273 73 0 chr2 83781187 83781242 -169475341 + MIR SINE MIR 159 217 -45 186 225 70 56 chr2 83781254 83781325 -169475258 + L2 LINE L2 2517 2588 -726 184 250 0 0 chr2 83782386 83782422 -169474161 - MIR SINE MIR -9 253 218 184 279 25 51 chr2 83785204 83785283 -169471300 + L3 LINE CR1 1325 1401 -176 183 319 21 11 chr2 83785397 83785491 -169471092 + L3 LINE CR1 1466 1560 -17 554 299 93 43 chr2 83785674 83786159 -169470424 + MLT1J LTR MaLR 1 509 -2 209 192 343 0 chr2 83786939 83787012 -169469571 + MIR3 SINE MIR 96 193 -15 298 294 24 0 chr2 83787021 83787106 -169469477 - L2 LINE L2 -2 3270 3184 309 117 0 0 chr2 83787773 83787833 -169468750 + (T)n Simple_repeat Simple_repeat 1 60 0 200 298 71 12 chr2 83787968 83788052 -169468531 + L2 LINE L2 3156 3244 -28 180 266 63 25 chr2 83788200 83788279 -169468304 + L2 LINE L2 2702 2783 -531 207 245 19 0 chr2 83788549 83788602 -169467981 + L2 LINE L2 3194 3247 -66 * 558 296 6 22 chr2 83788591 83788770 -169467813 + MIR SINE MIR 71 246 -16 2342 107 0 7 chr2 83788887 83789196 -169467387 - AluSq SINE Alu -6 307 1 1001 240 65 3 chr2 83789213 83789567 -169467016 - Charlie2 DNA MER1_type -17 2845 2470 784 161 0 8 chr2 83789636 83789779 -169466804 + FLAM_C SINE Alu 2 143 0 1129 277 33 25 chr2 83789792 83789913 -169466670 - L1M4 LINE L1 -1256 4890 4771 2423 122 70 8 chr2 83789913 83790314 -169466269 + MSTA LTR MaLR 1 426 -2 1129 277 33 25 chr2 83790314 83790680 -169465903 - L1M4 LINE L1 -1375 4771 4399 229 240 116 8 chr2 83790700 83790821 -169465762 - Charlie2 DNA MER1_type -411 2451 2318 588 306 50 20 chr2 83790926 83791227 -169465356 - Charlie2 DNA MER1_type -2551 311 2 25 51 0 0 chr2 83791447 83791486 -169465097 + AT_rich Low_complexity Low_complexity 1 39 0 327 270 112 47 chr2 83792202 83792277 -169464306 + MIR SINE MIR 14 83 -132 3680 160 33 9 chr2 83792277 83792970 -169463613 - MER67C LTR ERV1 0 710 1 327 270 112 47 chr2 83792970 83793035 -169463548 + MIR SINE MIR 83 154 -61 978 155 11 50 chr2 83793382 83793563 -169463020 + FAM SINE Alu 2 175 0 180 0 0 0 chr2 83795099 83795119 -169461464 + (T)n Simple_repeat Simple_repeat 1 20 0 1734 125 3 67 chr2 83797268 83797637 -169458946 - MER4A LTR ERV1 0 664 261 499 140 54 0 chr2 83797637 83797730 -169458853 - MER4A LTR ERV1 -566 98 1 207 357 69 9 chr2 83797825 83797938 -169458645 + MIR SINE MIR 17 146 -62 229 25 100 0 chr2 83798050 83798090 -169458493 + T-rich Low_complexity Low_complexity 2 45 0 203 253 22 44 chr2 83798756 83798847 -169457736 + MIR SINE MIR 124 212 -50 245 29 0 29 chr2 83799319 83799354 -169457229 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 302 186 29 0 chr2 83799357 83799427 -169457156 + (TATATG)n Simple_repeat Simple_repeat 2 73 0 358 313 8 0 chr2 83799901 83800032 -169456551 + L1ME LINE L1 5604 5735 -386 391 188 0 0 chr2 83800033 83800102 -169456481 + MLT1D LTR MaLR 1 69 -436 * 1853 198 64 28 chr2 83800101 83800570 -169456013 + MLT1D LTR MaLR 17 502 -3 258 81 0 0 chr2 83800796 83800833 -169455750 + (TG)n Simple_repeat Simple_repeat 1 37 0 278 357 0 0 chr2 83801114 83801198 -169455385 - MIR3 SINE MIR -30 178 95 955 238 67 50 chr2 83801303 83801783 -169454800 - MER39 LTR ERV1 -11 684 1 354 271 0 0 chr2 83802669 83802754 -169453829 + MER94 DNA DNA 1 85 -49 198 316 215 6 chr2 83803137 83803295 -169453288 + MIR SINE MIR 28 218 -44 984 210 19 28 chr2 83803474 83803688 -169452895 + MER20 DNA MER1_type 1 212 -7 209 119 24 0 chr2 83804287 83804329 -169452254 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1690 119 43 126 chr2 83804684 83804747 -169451836 - MLT1B LTR MaLR -4 386 319 2281 163 42 2 chr2 83804747 83805177 -169451406 - L1PA16 LINE L1 -9 6157 5711 1690 119 43 126 chr2 83805177 83805341 -169451242 - MLT1B LTR MaLR -71 319 207 357 82 0 0 chr2 83805341 83805390 -169451193 + (TG)n Simple_repeat Simple_repeat 2 50 0 1690 119 43 126 chr2 83805390 83805582 -169451001 - MLT1B LTR MaLR -183 207 1 2512 76 3 0 chr2 83806233 83806536 -169450047 - AluY SINE Alu -7 304 1 351 286 77 0 chr2 83808041 83808193 -169448390 - MIR SINE MIR -34 228 63 2067 80 14 14 chr2 83808747 83809083 -169447500 + AluSq SINE Alu 1 336 0 243 0 0 0 chr2 83809118 83809145 -169447438 + (CA)n Simple_repeat Simple_repeat 2 28 0 298 325 50 25 chr2 83809804 83809924 -169446659 + MIR SINE MIR 2 124 -138 267 314 12 12 chr2 83810430 83810522 -169446061 + MER5A DNA MER1_type 56 136 -42 2639 55 0 0 chr2 83810702 83811009 -169445574 - AluY SINE Alu -4 307 1 197 274 95 105 chr2 83812923 83813018 -169443565 - L2 LINE L2 -19 3253 3160 2779 139 13 4 chr2 83814444 83814919 -169441664 + L1PA15 LINE L1 5594 6072 -93 435 149 37 28 chr2 83815003 83815110 -169441473 + L1PA15 LINE L1 6057 6164 -1 223 341 61 0 chr2 83815706 83815788 -169440795 - L2 LINE L2 0 3272 3186 720 122 41 8 chr2 83815818 83815941 -169440642 + MLT1A1 LTR MaLR 10 136 -229 * 1525 159 20 17 chr2 83815929 83816225 -169440358 + MLT1A1 LTR MaLR 64 360 -5 322 259 22 36 chr2 83816284 83816423 -169440160 + CT-rich Low_complexity Low_complexity 3 139 0 2136 70 0 4 chr2 83817719 83817976 -169438607 + AluY SINE Alu 40 295 -16 24 0 0 0 chr2 83817991 83818015 -169438568 + AT_rich Low_complexity Low_complexity 1 24 0 349 271 108 31 chr2 83818846 83818975 -169437608 + MIR3 SINE MIR 15 153 -55 258 260 151 0 chr2 83819237 83819310 -169437273 - MIR SINE MIR -59 149 66 199 313 61 69 chr2 83819972 83820103 -169436480 - MIR3 SINE MIR -65 143 14 319 176 22 0 chr2 83820116 83820207 -169436376 + CT-rich Low_complexity Low_complexity 1 93 0 404 146 56 11 chr2 83821255 83821344 -169435239 + MER53 DNA DNA 1 93 -96 650 96 0 122 chr2 83821438 83821523 -169435060 - MER96B DNA MER1_type? -238 179 120 2197 120 7 7 chr2 83821523 83821823 -169434760 + AluSg SINE Alu 1 300 -10 650 96 0 122 chr2 83821823 83821893 -169434690 - MER96B DNA MER1_type? -297 120 43 301 267 175 17 chr2 83825326 83825446 -169431137 + MIR3 SINE MIR 22 160 -48 542 300 74 16 chr2 83827933 83828082 -169428501 - MIR SINE MIR -4 258 88 2522 119 8 0 chr2 83828082 83828443 -169428140 + THE1B LTR MaLR 1 364 0 542 300 74 16 chr2 83828443 83828536 -169428047 - MIR SINE MIR -174 88 2 2025 138 0 39 chr2 83829262 83829573 -169427010 + AluSx SINE Alu 1 299 -13 1219 145 0 16 chr2 83829675 83829861 -169426722 - AluSg/x SINE Alu -64 248 66 273 263 36 73 chr2 83831626 83831763 -169424820 + L2 LINE L2 2905 3036 -236 211 333 40 24 chr2 83832178 83832304 -169424279 - MER5A DNA MER1_type -28 161 34 192 360 0 0 chr2 83832251 83832326 -169424257 + MER5A DNA MER1_type 115 189 0 * 2977 214 55 9 chr2 83832613 83833273 -169423310 - MER21B LTR ERV1 -124 739 50 198 137 63 0 chr2 83833449 83833544 -169423039 + (TA)n Simple_repeat Simple_repeat 2 102 0 1280 163 17 42 chr2 83833654 83833943 -169422640 - MER96B DNA MER1_type? 0 417 136 2602 127 333 8 chr2 83834428 83835080 -169421503 - L1P LINE L1 -2102 4044 3181 219 349 218 15 chr2 83835381 83835642 -169420941 - L3 LINE CR1 -7 1570 1257 1827 102 84 4 chr2 83836790 83837065 -169419518 + AluY SINE Alu 1 297 -14 2587 48 0 3 chr2 83837259 83837568 -169419015 + AluY SINE Alu 1 308 -3 511 246 0 22 chr2 83838182 83838320 -169418263 + MER58B DNA MER1_type 207 341 0 253 303 81 0 chr2 83840231 83840330 -169416253 + L2 LINE L2 3166 3272 0 695 289 78 0 chr2 83842384 83842616 -169413967 + MIR SINE MIR 12 261 -1 534 286 75 0 chr2 83844878 83845025 -169411558 + MER117 DNA MER1_type 40 197 0 245 278 0 0 chr2 83845190 83845244 -169411339 + LTR67 LTR ERVL 30 83 -474 303 143 0 0 chr2 83845481 83845530 -169411053 + LTR67 LTR ERVL 495 543 -14 439 277 155 0 chr2 83845558 83845706 -169410877 - MER5A DNA MER1_type -6 183 13 446 232 85 55 chr2 83845966 83846249 -169410334 - L1MC5 LINE L1 -1064 6978 6684 3472 136 61 68 chr2 83846275 83847097 -169409486 + L1MA9 LINE L1 5493 6308 -4 22 56 0 0 chr2 83847296 83847332 -169409251 + AT_rich Low_complexity Low_complexity 1 36 0 24 53 0 0 chr2 83847449 83847487 -169409096 + AT_rich Low_complexity Low_complexity 1 38 0 330 331 64 31 chr2 83847495 83847854 -169408729 - HAL1b LINE L1 -748 600 230 571 189 118 0 chr2 83847858 83848027 -169408556 - L1MA7 LINE L1 0 6291 6103 223 277 11 43 chr2 83848240 83848424 -169408159 + T-rich Low_complexity Low_complexity 3 180 0 471 326 24 11 chr2 83848881 83849080 -169407503 + MIR SINE MIR 45 247 -15 252 0 0 0 chr2 83850750 83850778 -169405805 + (A)n Simple_repeat Simple_repeat 1 28 0 180 0 0 0 chr2 83851172 83851192 -169405391 + (CCA)n Simple_repeat Simple_repeat 3 22 0 262 258 0 15 chr2 83851808 83851874 -169404709 + GA-rich Low_complexity Low_complexity 2 66 0 746 237 78 48 chr2 83852643 83852762 -169403821 - L1M4 LINE L1 -1828 4318 4204 2173 140 25 14 chr2 83852762 83853120 -169403463 - THE1B LTR MaLR 0 364 3 746 237 78 48 chr2 83853120 83853438 -169403145 - L1M4 LINE L1 -1942 4204 3868 722 270 138 19 chr2 83853469 83854051 -169402532 - L1M4 LINE L1 -2503 3643 2993 750 262 53 45 chr2 83854336 83854675 -169401908 - LTR52 LTR ERVL -40 381 37 2314 85 0 0 chr2 83854675 83854969 -169401614 - AluSg SINE Alu -16 294 1 750 262 53 45 chr2 83854969 83855007 -169401576 - LTR52 LTR ERVL -384 37 1 468 222 0 0 chr2 83855008 83855107 -169401476 - LTR52-int LTR ERVL -1 3555 3457 180 0 0 0 chr2 83856648 83856668 -169399915 + (TTG)n Simple_repeat Simple_repeat 2 21 0 625 379 51 29 chr2 83857156 83857835 -169398748 + L2 LINE L2 2553 3252 -20 1016 318 145 4 chr2 83858517 83859254 -169397329 - L2 LINE L2 -7 3306 2453 439 152 0 0 chr2 83859492 83859571 -169397012 + AluJ/FRAM SINE Alu 232 310 -2 690 323 0 5 chr2 83859984 83860185 -169396398 - MIR SINE MIR -61 201 2 391 298 147 60 chr2 83860995 83861213 -169395370 - MIR SINE MIR -6 256 20 205 161 0 0 chr2 83861550 83861581 -169395002 + (TATG)n Simple_repeat Simple_repeat 4 34 0 206 274 204 9 chr2 83862063 83862176 -169394407 + MIR3 SINE MIR 67 201 -7 25 31 0 0 chr2 83862721 83862753 -169393830 + AT_rich Low_complexity Low_complexity 1 32 0 22 35 0 0 chr2 83863338 83863367 -169393216 + AT_rich Low_complexity Low_complexity 1 29 0 1314 158 118 24 chr2 83865032 83865286 -169391297 - AluJb SINE Alu -7 305 28 1221 157 69 0 chr2 83865529 83865733 -169390850 - MER20 DNA MER1_type 0 219 2 224 250 118 0 chr2 83866819 83866887 -169389696 + MER5A DNA MER1_type 6 81 -108 1728 159 50 31 chr2 83867077 83867105 -169389478 + MLT1A1 LTR MaLR 1 27 -338 1837 213 8 0 chr2 83867105 83867467 -169389116 - MLT1A1 LTR MaLR 0 365 1 1728 159 50 31 chr2 83867467 83867796 -169388787 + MLT1A1 LTR MaLR 27 365 0 1496 177 58 78 chr2 83868219 83868261 -169388322 - MLT1B LTR MaLR -1 389 348 1991 110 3 38 chr2 83868261 83868577 -169388006 + AluSq SINE Alu 1 306 0 1496 177 58 78 chr2 83868577 83868929 -169387654 - MLT1B LTR MaLR -42 348 2 216 0 0 0 chr2 83868969 83868993 -169387590 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2142 118 0 29 chr2 83869931 83870245 -169386338 - AluSx SINE Alu -7 305 1 183 279 125 58 chr2 83870339 83870443 -169386140 - MIR SINE MIR -72 136 26 * 722 274 62 51 chr2 83870419 83870711 -169385872 - L2 LINE L2 -19 3294 3000 644 276 70 48 chr2 83871366 83871739 -169384844 - MLT1I LTR MaLR -9 400 20 267 303 118 0 chr2 83873918 83874037 -169382546 - L2 LINE L2 -2 3311 3179 214 250 18 18 chr2 83874049 83874105 -169382478 + MIR3 SINE MIR 10 65 -143 410 285 67 31 chr2 83874115 83874308 -169382275 + MIR SINE MIR 3 202 -60 180 365 75 0 chr2 83874526 83874633 -169381950 - MIR SINE MIR -143 119 5 210 318 91 0 chr2 83874634 83874722 -169381861 + MIR3 SINE MIR 109 204 -4 424 185 12 0 chr2 83875002 83875083 -169381500 - MER20 DNA MER1_type -4 215 134 1227 229 39 33 chr2 83875087 83875450 -169381133 + MLT1A2 LTR MaLR 7 371 -3 615 154 65 0 chr2 83875450 83875569 -169381014 - MER20 DNA MER1_type -81 138 12 1835 176 3 6 chr2 83875674 83876023 -169380560 - AluJb SINE Alu 0 348 1 374 287 37 48 chr2 83876074 83876262 -169380321 - MER5A DNA MER1_type -3 186 1 561 277 59 25 chr2 83876419 83876621 -169379962 + MIR SINE MIR 47 255 -7 253 415 16 16 chr2 83876721 83876909 -169379674 - MER5A DNA MER1_type 0 189 2 740 227 49 0 chr2 83879006 83879169 -169377414 - MER5B DNA MER1_type -2 176 6 865 170 6 36 chr2 83879664 83879879 -169376704 + FRAM SINE Alu 1 201 0 230 253 33 11 chr2 83879896 83879987 -169376596 - L1ME4a LINE L1 -4 6117 6025 2553 117 22 0 chr2 83881694 83882061 -169374522 + THE1C LTR MaLR 1 375 0 21 0 0 0 chr2 83882249 83882270 -169374313 + AT_rich Low_complexity Low_complexity 1 21 0 371 367 51 23 chr2 83882632 83882809 -169373774 - MIR SINE MIR -80 182 1 374 353 33 0 chr2 83882829 83882951 -169373632 - L2 LINE L2 0 3272 3147 239 281 0 0 chr2 83884558 83884615 -169371968 + A-rich Low_complexity Low_complexity 1 57 0 330 324 27 38 chr2 83885468 83885653 -169370930 - MIR3 SINE MIR -25 183 1 252 308 33 22 chr2 83886440 83886531 -169370052 - MIR SINE MIR -139 123 32 456 267 45 102 chr2 83887144 83887334 -169369249 + MIR SINE MIR 12 184 -78 1827 129 11 67 chr2 83887334 83887607 -169368976 + L1MA4 LINE L1 5950 6198 -102 1938 114 47 17 chr2 83887607 83887904 -169368679 - AluSx SINE Alu -6 306 1 1827 129 11 67 chr2 83887904 83888002 -169368581 + L1MA4 LINE L1 6198 6300 0 456 267 45 102 chr2 83888002 83888077 -169368506 + MIR SINE MIR 184 262 0 190 354 0 30 chr2 83889189 83889288 -169367295 - L3 LINE CR1 -3 1574 1479 1696 137 8 118 chr2 83889399 83889763 -169366820 + Tigger3(Golem) DNA MER2_type 2 3005 -24 350 230 40 20 chr2 83889765 83889865 -169366718 - MER5B DNA MER1_type -75 103 2 993 186 5 62 chr2 83891328 83891521 -169365062 - MER5A DNA MER1_type 0 189 8 2306 157 19 40 chr2 83891612 83892091 -169364492 + MER31A LTR ERV1 1 469 -16 421 267 23 46 chr2 83892224 83892581 -169364002 + MARNA DNA Mariner 179 560 -26 226 372 54 45 chr2 83892623 83892846 -169363737 - MIR SINE MIR -6 256 32 285 182 0 0 chr2 83893127 83893182 -169363401 + CT-rich Low_complexity Low_complexity 2 56 0 180 321 18 0 chr2 83894339 83894395 -169362188 - MIR SINE MIR -150 112 56 870 250 56 5 chr2 83895260 83895476 -169361107 - MIR SINE MIR -26 236 10 180 277 96 24 chr2 83895648 83895731 -169360852 - L3 LINE CR1 -1218 359 271 209 304 174 0 chr2 83897653 83897745 -169358838 - MIR SINE MIR -142 120 13 478 276 54 10 chr2 83897818 83898021 -169358562 + L1MD3 LINE L1 7770 7981 -14 1820 169 85 3 chr2 83898180 83898511 -169358072 + MLT1A1 LTR MaLR 8 365 0 378 333 68 4 chr2 83898511 83898747 -169357836 - MARNA DNA Mariner -50 536 286 2166 96 4 0 chr2 83898934 83899246 -169357337 - AluSg SINE Alu 0 313 1 180 209 23 23 chr2 83899323 83899366 -169357217 + L2 LINE L2 3210 3252 -20 213 325 65 0 chr2 83899433 83899510 -169357073 + MIR3 SINE MIR 111 192 -16 532 316 65 56 chr2 83900493 83900832 -169355751 + MER115 DNA AcHobo 1 342 -351 566 314 63 57 chr2 83901143 83901787 -169354796 - L2 LINE L2 0 3313 2588 3039 176 40 2 chr2 83903785 83904313 -169352270 - MER44D DNA MER2_type 0 605 3 890 185 46 6 chr2 83904436 83904609 -169351974 + MER58A DNA MER1_type 43 222 -2 328 321 152 27 chr2 83905620 83905994 -169350589 - Charlie8 DNA MER1_type -1961 456 36 229 276 72 40 chr2 83906352 83906504 -169350079 - L1ME4a LINE L1 -11 6110 5954 2044 118 28 3 chr2 83907724 83908011 -169348572 - AluSx SINE Alu -18 294 1 194 152 0 22 chr2 83908530 83908576 -169348007 + G-rich Low_complexity Low_complexity 5 49 0 29 47 0 0 chr2 83908605 83908648 -169347935 + AT_rich Low_complexity Low_complexity 1 43 0 28 54 0 0 chr2 83911416 83911453 -169345130 + AT_rich Low_complexity Low_complexity 1 37 0 312 332 45 20 chr2 83912068 83912270 -169344313 + L1ME4a LINE L1 5691 5897 -224 227 267 221 0 chr2 83912362 83912534 -169344049 + L2 LINE L2 3102 3311 -2 279 317 78 28 chr2 83912667 83912809 -169343774 - MIR SINE MIR -104 158 10 1349 128 72 4 chr2 83913775 83914040 -169342543 - AluSx SINE Alu -26 286 4 180 0 0 0 chr2 83915016 83915036 -169341547 + (CAA)n Simple_repeat Simple_repeat 2 21 0 803 174 0 0 chr2 83915210 83915331 -169341252 + AluSg/x SINE Alu 172 292 -20 7299 97 14 14 chr2 83915364 83916465 -169340118 + L1PA8 LINE L1 4388 5486 -686 2190 122 3 0 chr2 83916465 83916761 -169339822 + AluSp SINE Alu 1 297 -16 7299 97 14 14 chr2 83916761 83917436 -169339147 + L1PA8 LINE L1 5485 6159 -13 204 317 236 16 chr2 83918638 83918761 -169337822 + MIR3 SINE MIR 3 152 -56 249 337 12 0 chr2 83919160 83919243 -169337340 + L2 LINE L2 3188 3271 -1 490 232 80 72 chr2 83919788 83920038 -169336545 + L1MC5 LINE L1 7180 7431 -530 213 156 0 22 chr2 83920090 83920135 -169336448 + (TAAA)n Simple_repeat Simple_repeat 4 47 0 1049 229 49 10 chr2 83920158 83920463 -169336120 + L1MC5 LINE L1 7609 7925 -36 1296 176 50 18 chr2 83921369 83921648 -169334935 + AluSx SINE Alu 1 288 -24 567 272 103 0 chr2 83923797 83923981 -169332602 + MER58C DNA MER1_type 11 213 -2 280 294 119 28 chr2 83924238 83924415 -169332168 + MARNA DNA Mariner 322 514 -72 228 100 0 0 chr2 83924422 83924462 -169332121 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 282 273 0 0 chr2 83924569 83924635 -169331948 + MER5A DNA MER1_type 4 69 -120 2245 112 0 3 chr2 83924643 83924955 -169331628 + AluY SINE Alu 1 311 0 190 83 0 0 chr2 83924956 83924980 -169331603 + MER5B DNA MER1_type 155 178 0 585 304 18 0 chr2 83925132 83925300 -169331283 - MER5B DNA MER1_type -2 176 6 267 276 104 22 chr2 83925469 83925603 -169330980 - MER5B DNA MER1_type 0 178 34 851 185 19 6 chr2 83925650 83925807 -169330776 + MER5A DNA MER1_type 29 187 -2 437 233 62 23 chr2 83926377 83926506 -169330077 - MIR SINE MIR -19 243 110 1157 67 0 0 chr2 83926506 83926641 -169329942 + AluSq/x SINE Alu 1 135 -178 2298 112 0 0 chr2 83926641 83926944 -169329639 + AluSg SINE Alu 1 303 -7 257 359 26 8 chr2 83926946 83927063 -169329520 - MIR SINE MIR -141 121 3 * 461 257 112 14 chr2 83927063 83927136 -169329447 - MIR SINE MIR -69 193 132 600 100 0 0 chr2 83927136 83927216 -169329367 + MADE1 DNA Mariner 1 80 0 461 257 112 14 chr2 83927216 83927323 -169329260 - MIR SINE MIR -130 132 1 333 202 48 12 chr2 83928088 83928172 -169328411 + L1PB1 LINE L1 6040 6126 -25 313 316 103 0 chr2 83928994 83929149 -169327434 - MIR SINE MIR -87 175 5 1055 157 154 36 chr2 83930383 83930724 -169325859 - MSTA LTR MaLR 0 428 10 2078 185 56 48 chr2 83931406 83931887 -169324696 - MLT1D LTR MaLR 0 505 21 1544 208 21 15 chr2 83932519 83932851 -169323732 + MLT1A1 LTR MaLR 25 358 -7 240 111 0 0 chr2 83934119 83934155 -169322428 + (CA)n Simple_repeat Simple_repeat 1 36 0 21 0 0 0 chr2 83934464 83934485 -169322098 + AT_rich Low_complexity Low_complexity 1 21 0 1384 180 12 8 chr2 83936207 83936457 -169320126 + AluJo SINE Alu 1 251 -61 183 42 0 0 chr2 83937399 83937423 -169319160 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 286 310 20 0 chr2 83938255 83938355 -169318228 - MIR SINE MIR -73 189 88 2182 90 7 13 chr2 83938633 83938934 -169317649 - AluSp SINE Alu -14 299 1 13797 133 52 16 chr2 83941006 83943316 -169313267 - Tigger1 DNA MER2_type 0 2418 26 1950 187 27 0 chr2 83943495 83943832 -169312751 - MER7A DNA MER2_type -1 345 2 32 0 0 0 chr2 83943837 83943869 -169312714 + AT_rich Low_complexity Low_complexity 1 32 0 1880 144 0 24 chr2 83943877 83944198 -169312385 + AluSx SINE Alu 1 314 0 183 309 24 12 chr2 83947055 83947139 -169309444 - L3b LINE CR1 -84 1499 1415 2709 207 217 66 chr2 83947679 83948563 -169308020 + LTR28 LTR ERV1 3 1020 0 272 261 87 35 chr2 83948892 83949007 -169307576 + MLT1J2 LTR MaLR 37 157 -293 344 150 0 33 chr2 83949077 83949137 -169307446 + MLT1I LTR MaLR 350 407 -2 860 195 55 30 chr2 83949760 83949960 -169306623 + MER106A DNA MER1_type 32 236 0 21 36 0 0 chr2 83950007 83950035 -169306548 + AT_rich Low_complexity Low_complexity 1 28 0 2376 94 7 0 chr2 83950520 83950827 -169305756 - AluSq SINE Alu -4 309 1 225 208 26 78 chr2 83952830 83952907 -169303676 + MIR SINE MIR 16 88 -120 314 243 9 84 chr2 83953431 83953538 -169303045 + MIR SINE MIR 95 193 -69 1658 155 10 59 chr2 83954208 83954511 -169302072 - AluSx SINE Alu -24 288 1 324 228 125 44 chr2 83954569 83954705 -169301878 - MIR3 SINE MIR -17 191 45 636 250 60 0 chr2 83955459 83955627 -169300956 - MIR SINE MIR -48 214 37 316 293 130 8 chr2 83955664 83955787 -169300796 - MIR SINE MIR 0 262 125 374 280 32 109 chr2 83955959 83956471 -169300112 + L2 LINE L2 2596 3064 -208 231 114 0 0 chr2 83957532 83957567 -169299016 + (TTCA)n Simple_repeat Simple_repeat 2 36 0 402 312 84 19 chr2 83957897 83958112 -169298471 - MIR SINE MIR -13 249 21 1144 239 77 57 chr2 83958127 83958708 -169297875 + MLT1E3 LTR MaLR 1 610 -14 403 330 0 0 chr2 83959332 83959450 -169297133 + MIR3 SINE MIR 82 199 -9 1586 182 9 38 chr2 83959493 83959812 -169296771 - AluJb SINE Alu -2 310 1 201 285 39 27 chr2 83960604 83960684 -169295899 - MIR SINE MIR -135 73 2 507 265 53 21 chr2 83960901 83961090 -169295493 + LTR16A1 LTR ERVL 254 448 -9 233 274 0 0 chr2 83962201 83962252 -169294331 + L2 LINE L2 3222 3272 0 463 208 17 0 chr2 83962254 83962374 -169294209 + (TGGA)n Simple_repeat Simple_repeat 4 125 0 262 205 12 115 chr2 83962754 83962862 -169293721 - L1MC4 LINE L1 0 8042 7925 2021 143 7 0 chr2 83962862 83963156 -169293427 - AluSx SINE Alu -16 296 1 262 205 12 115 chr2 83963156 83963188 -169293395 - L1MC4 LINE L1 -117 7925 7800 1291 235 73 16 chr2 83964626 83965155 -169291428 - MLT1E LTR MaLR 0 593 3 263 216 91 68 chr2 83966161 83966249 -169290334 - MIR SINE MIR -116 92 2 21 0 0 0 chr2 83966282 83966303 -169290280 + AT_rich Low_complexity Low_complexity 1 21 0 1942 186 23 39 chr2 83966444 83966731 -169289852 - MLT1C LTR MaLR -3 464 185 2396 90 0 6 chr2 83966731 83967043 -169289540 - AluSx SINE Alu -2 310 1 1942 186 23 39 chr2 83967043 83967191 -169289392 - MLT1C LTR MaLR -282 185 36 254 438 0 0 chr2 83967520 83967657 -169288926 - L3 LINE CR1 0 1577 1441 536 189 61 14 chr2 83967826 83967974 -169288609 + LTR37A LTR ERV1 272 426 0 348 275 78 48 chr2 83968001 83968168 -169288415 - L3 LINE CR1 -212 1365 1194 319 343 108 55 chr2 83969637 83970219 -169286364 - L2 LINE L2 0 3272 2661 2242 125 123 5 chr2 83970278 83970661 -169285922 - MSTA LTR MaLR 0 428 1 469 209 55 0 chr2 83970919 83971029 -169285554 + MER94 DNA DNA 1 116 -18 591 237 21 38 chr2 83972216 83972402 -169284181 + MER58B DNA MER1_type 137 319 -22 1236 224 25 25 chr2 83973577 83973894 -169282689 + MER58B DNA MER1_type 3 319 -22 271 268 0 0 chr2 83975244 83975300 -169281283 + (TG)n Simple_repeat Simple_repeat 1 56 0 2555 119 14 0 chr2 83976483 83976853 -169279730 + THE1C LTR MaLR 1 375 0 2259 81 20 10 chr2 83976886 83977182 -169279401 - AluSg SINE Alu -11 299 1 709 202 84 19 chr2 83977291 83977504 -169279079 + L1MD3 LINE L1 7756 7982 -13 367 269 103 31 chr2 83977510 83977733 -169278850 + L1ME4a LINE L1 5877 6115 -6 252 348 22 43 chr2 83977805 83977897 -169278686 - MIR SINE MIR -171 91 2 204 365 40 40 chr2 83977897 83978023 -169278560 + L2 LINE L2 3188 3313 0 29 0 0 0 chr2 83978518 83978547 -169278036 + AT_rich Low_complexity Low_complexity 1 29 0 2248 85 0 0 chr2 83979148 83979460 -169277123 - AluY SINE Alu 0 312 1 23 0 0 0 chr2 83980004 83980027 -169276556 + AT_rich Low_complexity Low_complexity 1 23 0 236 247 247 0 chr2 83980611 83980696 -169275887 + L2 LINE L2 3162 3267 -5 240 86 0 0 chr2 83980781 83980816 -169275767 + (TA)n Simple_repeat Simple_repeat 1 35 0 355 205 96 130 chr2 83981232 83981471 -169275112 - Charlie8 DNA MER1_type -1017 1400 72 1058 220 23 0 chr2 83981576 83981794 -169274789 + MER58A DNA MER1_type 2 224 0 324 0 0 0 chr2 83982075 83982111 -169274472 + (TTAAA)n Simple_repeat Simple_repeat 4 39 0 581 234 38 19 chr2 83982704 83982862 -169273721 - MIR SINE MIR 0 262 102 203 321 45 36 chr2 83983382 83983494 -169273089 - MIR SINE MIR -65 143 31 589 198 93 37 chr2 83983664 83983826 -169272757 + MER5C DNA MER1_type 23 193 -131 36 40 0 0 chr2 83983848 83983898 -169272685 + AT_rich Low_complexity Low_complexity 1 50 0 25 0 0 0 chr2 83984019 83984044 -169272539 + AT_rich Low_complexity Low_complexity 1 25 0 658 324 100 14 chr2 83984429 83984719 -169271864 - L3 LINE CR1 -86 1491 1177 924 186 5 37 chr2 83984719 83984907 -169271676 - MER20 DNA MER1_type -1 218 37 24 0 0 0 chr2 83985028 83985052 -169271531 + AT_rich Low_complexity Low_complexity 1 24 0 4649 155 32 17 chr2 83985066 83986421 -169270162 + L1PB3 LINE L1 4411 5800 -354 324 48 0 0 chr2 83986421 83986463 -169270120 + (CA)n Simple_repeat Simple_repeat 2 43 0 4649 155 32 17 chr2 83986463 83986735 -169269848 + L1PB3 LINE L1 5800 6066 -88 26 64 0 0 chr2 83986856 83986903 -169269680 + AT_rich Low_complexity Low_complexity 1 47 0 1069 196 147 58 chr2 83988016 83988343 -169268240 - MLT1A1 LTR MaLR 0 365 10 868 210 55 11 chr2 83988950 83989131 -169267452 + MER5A DNA MER1_type 1 189 0 336 143 0 0 chr2 83992041 83992097 -169264486 + (TG)n Simple_repeat Simple_repeat 2 57 0 21 0 0 0 chr2 83992451 83992472 -169264111 + AT_rich Low_complexity Low_complexity 1 21 0 666 211 5 89 chr2 83992508 83992698 -169263885 - MER20 DNA MER1_type -8 211 38 204 40 0 0 chr2 83993652 83993677 -169262906 + (A)n Simple_repeat Simple_repeat 1 25 0 258 319 106 18 chr2 83993941 83994054 -169262529 + MIR SINE MIR 16 138 -70 281 255 41 51 chr2 83995097 83995195 -169261388 - LTR40a LTR ERVL -162 357 261 2090 102 7 50 chr2 83995271 83995574 -169261009 - AluSq SINE Alu -23 290 1 1172 257 128 11 chr2 83995913 83996438 -169260145 + L1MC4a LINE L1 5334 5919 -1889 647 207 7 28 chr2 83997131 83997276 -169259307 - AluJo SINE Alu -170 142 1 230 292 46 100 chr2 83999312 83999442 -169257141 + L2 LINE L2 3146 3268 -4 201 306 102 9 chr2 83999424 83999532 -169257051 - MIR SINE MIR -49 213 96 * 228 159 0 0 chr2 83999723 83999767 -169256816 - MLT1F1 LTR MaLR -3 564 521 * 779 236 76 30 chr2 83999766 84000029 -169256554 - MLT1E LTR MaLR -318 275 1 312 27 0 0 chr2 84002159 84002196 -169254387 + (TG)n Simple_repeat Simple_repeat 1 37 0 194 405 16 16 chr2 84002239 84002365 -169254218 - L2 LINE L2 -201 3071 2946 2542 71 0 0 chr2 84003232 84003540 -169253043 - AluY SINE Alu -3 308 1 2135 120 0 0 chr2 84003655 84003947 -169252636 - AluSx SINE Alu -20 292 1 281 56 0 0 chr2 84004621 84004657 -169251926 + MADE1 DNA Mariner 45 80 0 273 304 83 30 chr2 84005661 84005927 -169250656 - L1MC/D LINE L1 -2212 5596 5317 220 264 224 46 chr2 84007279 84007453 -169249130 - MIR SINE MIR -10 252 48 21 0 0 0 chr2 84008485 84008506 -169248077 + AT_rich Low_complexity Low_complexity 1 21 0 396 173 102 8 chr2 84008831 84008958 -169247625 - Charlie5 DNA MER1_type 0 2620 2482 222 37 0 0 chr2 84009374 84009401 -169247182 + (CA)n Simple_repeat Simple_repeat 2 28 0 1003 195 15 5 chr2 84010107 84010302 -169246281 + MER82 DNA MER2_type 11 207 -446 1273 101 0 87 chr2 84010303 84010510 -169246073 + AluSx SINE Alu 38 226 -86 276 277 287 0 chr2 84010517 84010618 -169245965 + MER119 DNA MER1_type 2 131 -452 642 304 104 22 chr2 84010704 84011257 -169245326 - L2 LINE L2 -2 3311 2589 221 273 91 18 chr2 84011626 84011736 -169244847 + MIR3 SINE MIR 8 125 -83 484 258 161 18 chr2 84012277 84012494 -169244089 + MIR SINE MIR 15 262 0 341 319 59 0 chr2 84012643 84012762 -169243821 - MIR SINE MIR -109 153 28 549 230 34 56 chr2 84013689 84013867 -169242716 + MIR SINE MIR 89 262 0 282 333 28 62 chr2 84014044 84014188 -169242395 + MIR SINE MIR 12 150 -112 1863 170 0 3 chr2 84014333 84014627 -169241956 + AluSx SINE Alu 1 293 -19 566 297 174 14 chr2 84014638 84014857 -169241726 - MIR SINE MIR 0 262 9 29 28 0 0 chr2 84015090 84015126 -169241457 + AT_rich Low_complexity Low_complexity 1 36 0 399 299 62 0 chr2 84016711 84016855 -169239728 + MIR SINE MIR 96 248 -14 307 265 227 15 chr2 84018225 84018357 -169238226 + MIR SINE MIR 32 191 -71 311 344 151 0 chr2 84020672 84020864 -169235719 + MIR SINE MIR 9 229 -33 180 308 107 50 chr2 84021057 84021216 -169235367 - MIR SINE MIR -59 203 36 3506 189 20 0 chr2 84021536 84022171 -169234412 + MER82 DNA MER2_type 2 649 -4 414 0 0 0 chr2 84023461 84023507 -169233076 + (TG)n Simple_repeat Simple_repeat 1 46 0 189 0 0 0 chr2 84025058 84025079 -169231504 + (T)n Simple_repeat Simple_repeat 1 21 0 210 37 0 0 chr2 84026940 84026967 -169229616 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 356 125 0 0 chr2 84027039 84027087 -169229496 - MER3 DNA MER1_type -1 208 161 4704 186 55 36 chr2 84027088 84029212 -169227371 - L1MB3 LINE L1 -1 6182 4015 7427 111 3 28 chr2 84029279 84029898 -169226685 - L1P LINE L1 -1308 4838 4260 2545 57 0 10 chr2 84029898 84030212 -169226371 - AluY SINE Alu 0 311 1 7427 111 3 28 chr2 84030212 84030759 -169225824 - L1P LINE L1 -1886 4260 3701 6199 82 36 2 chr2 84030759 84030947 -169225636 + L1PA8 LINE L1 4841 5021 -1151 180 0 0 0 chr2 84030947 84030967 -169225616 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 6199 82 36 2 chr2 84030967 84032074 -169224509 + L1PA8 LINE L1 5021 6170 -2 1608 229 40 94 chr2 84032077 84032757 -169223826 + L1MD1 LINE L1 5589 6231 -11 663 163 44 15 chr2 84032770 84032905 -169223678 - MER3 DNA MER1_type -59 150 12 1151 58 32 6 chr2 84033382 84033538 -169223045 - L1PA3 LINE L1 -4 6151 5992 22 0 0 0 chr2 84033683 84033705 -169222878 + AT_rich Low_complexity Low_complexity 1 22 0 576 275 84 26 chr2 84033709 84034174 -169222409 + L1M4 LINE L1 4887 5378 -768 346 89 71 0 chr2 84034328 84034384 -169222199 - AluJo/F(R)AM SINE Alu -91 220 161 469 128 39 0 chr2 84034385 84034463 -169222120 - AluJ/FLAM SINE Alu -221 91 11 447 173 0 25 chr2 84034617 84034698 -169221885 + MER63 DNA MER1_type 675 753 -83 241 284 60 0 chr2 84034700 84034767 -169221816 + MER63 DNA MER1_type 985 1055 -7 612 313 97 62 chr2 84034903 84035519 -169221064 - L1MB3 LINE L1 -2531 3615 2978 292 356 85 28 chr2 84035542 84035719 -169220864 + MIR3 SINE MIR 19 205 -3 21 57 0 0 chr2 84036889 84036924 -169219659 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr2 84037128 84037157 -169219426 + AT_rich Low_complexity Low_complexity 1 29 0 367 330 131 5 chr2 84037187 84037378 -169219205 + MIR SINE MIR 24 238 -24 25 0 0 0 chr2 84038214 84038239 -169218344 + AT_rich Low_complexity Low_complexity 1 25 0 414 0 0 0 chr2 84039968 84040014 -169216569 + (CA)n Simple_repeat Simple_repeat 2 47 0 259 224 0 71 chr2 84044876 84044978 -169211605 + GA-rich Low_complexity Low_complexity 1 94 0 1303 186 90 25 chr2 84047816 84048139 -169208444 - MER2 DNA MER2_type 0 344 1 25 0 0 0 chr2 84048268 84048293 -169208290 + AT_rich Low_complexity Low_complexity 1 25 0 184 250 0 50 chr2 84048967 84049027 -169207556 - L2 LINE L2 0 3272 3216 211 259 19 0 chr2 84052622 84052676 -169203907 + CT-rich Low_complexity Low_complexity 1 55 0 493 301 15 36 chr2 84054658 84054854 -169201729 + MIR3 SINE MIR 15 206 -2 201 263 19 144 chr2 84057245 84057405 -169199178 + MER5A DNA MER1_type 50 189 0 389 348 27 5 chr2 84058890 84059074 -169197509 - MIR SINE MIR -7 255 68 27 29 0 0 chr2 84059691 84059725 -169196858 + AT_rich Low_complexity Low_complexity 1 34 0 329 308 88 61 chr2 84059813 84060141 -169196442 - MLT1J LTR MaLR -75 436 100 6885 57 25 2 chr2 84060316 84061469 -169195114 - L1PA7 LINE L1 -1 6153 4994 4740 84 55 7 chr2 84061469 84062173 -169194410 + L1PA7 LINE L1 4246 4983 -1163 612 316 26 0 chr2 84062521 84062711 -169193872 + MIR SINE MIR 56 250 -12 271 203 0 58 chr2 84062811 84062880 -169193703 - L2 LINE L2 -56 3257 3193 339 322 96 28 chr2 84062965 84063142 -169193441 - MER5A DNA MER1_type 0 189 1 750 239 0 58 chr2 84063275 84063463 -169193120 - MER20 DNA MER1_type -39 180 4 2192 104 0 0 chr2 84063971 84064259 -169192324 + AluSc SINE Alu 15 302 -7 23 0 0 0 chr2 84064959 84064982 -169191601 + AT_rich Low_complexity Low_complexity 1 23 0 267 192 151 82 chr2 84065377 84065523 -169191060 + MIR SINE MIR 49 204 -58 407 307 30 30 chr2 84066445 84066623 -169189960 - MIR SINE MIR -57 151 23 261 308 110 34 chr2 84067273 84067419 -169189164 + MIR SINE MIR 104 260 -2 1163 308 77 28 chr2 84067715 84068545 -169188038 - L2 LINE L2 -10 3303 2356 524 307 26 11 chr2 84069317 84069506 -169187077 + MER117 DNA MER1_type 6 197 0 21 36 0 0 chr2 84069572 84069600 -169186983 + AT_rich Low_complexity Low_complexity 1 28 0 474 318 99 22 chr2 84070803 84071026 -169185557 - MIR SINE MIR 0 262 23 2141 119 0 0 chr2 84072815 84073110 -169183473 - AluSx SINE Alu -17 295 1 264 30 0 0 chr2 84073114 84073147 -169183436 + (TG)n Simple_repeat Simple_repeat 2 34 0 2338 86 7 3 chr2 84073421 84073724 -169182859 + AluSg SINE Alu 1 304 -6 280 342 87 20 chr2 84075948 84076097 -169180486 + L2 LINE L2 3100 3258 -14 368 273 33 41 chr2 84076840 84076961 -169179622 + MIR SINE MIR 6 125 -137 578 283 80 17 chr2 84077699 84077936 -169178647 + MIR SINE MIR 10 261 -1 735 174 90 39 chr2 84079098 84079276 -169177307 - MER5A DNA MER1_type 0 189 3 472 309 40 7 chr2 84080438 84080590 -169175993 + MIR SINE MIR 90 246 -16 182 118 29 0 chr2 84081496 84081530 -169175053 + T-rich Low_complexity Low_complexity 2 36 0 21 0 0 0 chr2 84082655 84082676 -169173907 + AT_rich Low_complexity Low_complexity 1 21 0 302 288 34 8 chr2 84085360 84085478 -169171105 + L1M4c LINE L1 413 533 -5770 2189 164 26 10 chr2 84085624 84086013 -169170570 - MER61B LTR ERV1 -30 395 1 272 282 36 18 chr2 84086384 84086494 -169170089 + L1M4c LINE L1 1086 1197 -5116 * 2567 262 34 21 chr2 84086493 84086733 -169169850 + L1M4c LINE L1 2450 2686 -3696 1765 144 50 42 chr2 84086733 84087114 -169169469 + L1MA5A LINE L1 5912 6295 -2 2567 262 34 21 chr2 84087114 84087770 -169168813 + L1M4c LINE L1 2686 3358 -3024 2216 200 61 7 chr2 84087772 84088236 -169168347 + MLT2B1 LTR ERVL 1 534 -20 504 72 0 0 chr2 84088237 84088306 -169168277 + (TTTC)n Simple_repeat Simple_repeat 4 72 0 250 158 18 18 chr2 84088313 84088370 -169168213 + MLT2C1 LTR ERVL 341 397 0 5608 233 75 39 chr2 84088370 84090447 -169166136 + L1M4c LINE L1 3356 5508 -874 210 143 0 0 chr2 84090457 84090492 -169166091 + (CA)n Simple_repeat Simple_repeat 2 36 0 256 194 0 32 chr2 84090502 84090564 -169166019 + L1MB3 LINE L1 5154 5213 -933 1612 203 7 0 chr2 84090567 84090848 -169165735 + AluJo SINE Alu 6 288 -24 1929 197 97 89 chr2 84090864 84091826 -169164757 + L1PA16 LINE L1 5191 6166 0 914 191 6 6 chr2 84091816 84091994 -169164589 + L1MB3 LINE L1 5814 5991 -192 * 2326 143 88 9 chr2 84091994 84092444 -169164139 + MER1A DNA MER1_type 1 528 -1 715 188 44 6 chr2 84092446 84092606 -169163977 + L1MB3 LINE L1 6016 6181 -2 403 301 57 67 chr2 84093206 84093399 -169163184 - LTR16C LTR ERVL 0 491 301 2325 75 13 13 chr2 84093832 84094139 -169162444 - AluSp SINE Alu -6 307 1 314 337 31 0 chr2 84094604 84094702 -169161881 - ERVL LTR ERVL -4180 1584 1484 21 36 0 0 chr2 84095535 84095563 -169161020 + AT_rich Low_complexity Low_complexity 1 28 0 2046 123 18 0 chr2 84095573 84095857 -169160726 + AluSx SINE Alu 3 291 -21 687 261 60 37 chr2 84096913 84097131 -169159452 - MER58A DNA MER1_type 0 224 2 354 349 68 7 chr2 84097297 84097443 -169159140 - L2 LINE L2 -4 3268 3114 219 253 253 25 chr2 84097942 84098100 -169158483 - MIR SINE MIR -29 233 40 1264 329 62 78 chr2 84098659 84099034 -169157549 - ERVL LTR ERVL -3275 2489 2109 2043 145 16 0 chr2 84099034 84099337 -169157246 + AluSx SINE Alu 5 312 0 270 0 0 0 chr2 84099340 84099370 -169157213 + (CAAG)n Simple_repeat Simple_repeat 2 31 0 1264 329 62 78 chr2 84099370 84100357 -169156226 - ERVL LTR ERVL -3657 2107 1145 281 311 8 8 chr2 84101306 84101425 -169155158 - LTR33A LTR ERVL 0 523 405 365 125 111 28 chr2 84101644 84101716 -169154867 - LTR33A LTR ERVL -342 181 104 1958 188 46 28 chr2 84101827 84102374 -169154209 + MLT2A2 LTR ERVL 1 554 0 2185 117 7 0 chr2 84102486 84102786 -169153797 - AluSq SINE Alu -9 304 3 191 319 121 60 chr2 84102808 84102990 -169153593 + MIR SINE MIR 10 202 -60 1823 121 3 37 chr2 84103290 84103588 -169152995 - AluSc SINE Alu -17 292 5 25 0 0 0 chr2 84105197 84105222 -169151361 + AT_rich Low_complexity Low_complexity 1 25 0 663 306 19 5 chr2 84105471 84105677 -169150906 + MER63A DNA MER1_type 2 210 0 440 243 120 14 chr2 84106034 84106199 -169150384 + MER5A DNA MER1_type 4 189 0 391 230 115 0 chr2 84106494 84106607 -169149976 + L1ME4a LINE L1 5963 6088 -33 2191 121 0 16 chr2 84106636 84106950 -169149633 + AluSg SINE Alu 1 309 -1 24 0 0 0 chr2 84107188 84107212 -169149371 + AT_rich Low_complexity Low_complexity 1 24 0 280 303 49 0 chr2 84107715 84107837 -169148746 - L1ME3A LINE L1 -230 5940 5813 440 77 15 0 chr2 84108783 84108848 -169147735 + (TCTA)n Simple_repeat Simple_repeat 4 69 0 2247 76 0 0 chr2 84108849 84109125 -169147458 - AluSg SINE Alu -19 291 16 419 323 92 15 chr2 84109361 84109556 -169147027 + MIR SINE MIR 46 255 -7 212 295 13 0 chr2 84110240 84110318 -169146265 + (TATG)n Simple_repeat Simple_repeat 2 80 0 266 289 195 0 chr2 84110450 84110578 -169146005 + MIR SINE MIR 110 262 0 228 321 0 0 chr2 84110752 84110808 -169145775 - L3 LINE CR1 -23 1554 1499 548 267 113 5 chr2 84111374 84111569 -169145014 + MIR SINE MIR 46 261 -1 220 286 29 67 chr2 84112316 84112421 -169144162 - MIR3 SINE MIR -103 105 5 185 250 214 24 chr2 84112916 84113000 -169143583 - MIR SINE MIR -68 140 41 2719 233 19 12 chr2 84113903 84114552 -169142031 + MER82 DNA MER2_type 1 653 0 301 284 64 0 chr2 84115206 84115315 -169141268 + L1ME4a LINE L1 5931 6046 -75 589 323 45 32 chr2 84116421 84116821 -169139762 + MLT1I LTR MaLR 1 405 -4 1047 158 0 0 chr2 84116927 84117098 -169139485 + MER2 DNA MER2_type 1 171 -174 2146 102 14 60 chr2 84117349 84117701 -169138882 - MER1B DNA MER1_type -1 336 1 242 342 84 32 chr2 84117996 84118112 -169138471 - MIR SINE MIR -98 164 37 1964 202 87 15 chr2 84118112 84118582 -169138001 - MLT1D LTR MaLR -1 504 1 242 342 84 32 chr2 84118582 84118620 -169137963 - MIR SINE MIR -225 37 2 827 158 7 43 chr2 84118758 84118897 -169137686 + AluJo SINE Alu 1 134 -178 224 266 76 0 chr2 84119012 84119091 -169137492 - MIR SINE MIR -108 154 70 2463 219 63 52 chr2 84119432 84120214 -169136369 + L1MDa LINE L1 115 904 -5636 1162 175 80 16 chr2 84120232 84120519 -169136064 + L1MD1 LINE L1 5936 6359 0 1792 186 0 20 chr2 84120579 84120880 -169135703 - AluJo SINE Alu -17 295 1 186 197 148 0 chr2 84121458 84121519 -169135064 - MIR SINE MIR -65 197 128 189 229 42 21 chr2 84123743 84123791 -169132792 - L2 LINE L2 -1 3312 3264 13606 44 8 1 chr2 84124010 84126465 -169130118 - L1PA5 LINE L1 -4 6150 3684 462 326 88 24 chr2 84127064 84127438 -169129145 + LTR33 LTR ERVL 12 409 -112 21 0 0 0 chr2 84129602 84129623 -169126960 + AT_rich Low_complexity Low_complexity 1 21 0 1247 323 71 45 chr2 84131741 84132314 -169124269 + ERVL LTR ERVL 3388 3945 -1581 1959 158 50 14 chr2 84132314 84132676 -169123907 - THE1C LTR MaLR 0 375 1 1247 323 71 45 chr2 84132676 84133192 -169123391 + ERVL LTR ERVL 3945 4543 -983 338 94 16 0 chr2 84133258 84133322 -169123261 + (CAAAAA)n Simple_repeat Simple_repeat 2 66 0 319 302 53 24 chr2 84133334 84133503 -169123080 + MIR SINE MIR 3 176 -86 254 298 36 12 chr2 84135203 84135287 -169121296 - MER81 DNA DNA -22 92 7 501 59 24 12 chr2 84135531 84135616 -169120967 + L1MA4A LINE L1 6216 6301 -2 236 321 0 0 chr2 84136109 84136190 -169120393 + (CA)n Simple_repeat Simple_repeat 1 81 0 226 156 22 0 chr2 84137177 84137222 -169119361 + A-rich Low_complexity Low_complexity 1 46 0 2121 122 0 0 chr2 84137872 84138159 -169118424 + AluSq SINE Alu 1 287 -26 246 238 167 0 chr2 84139159 84139243 -169117340 - MIR SINE MIR -62 146 49 275 331 57 51 chr2 84139384 84139541 -169117042 - MIR SINE MIR -37 225 68 219 262 33 0 chr2 84139531 84139592 -169116991 - MIR SINE MIR 0 262 200 * 22 0 0 0 chr2 84139864 84139886 -169116697 + AT_rich Low_complexity Low_complexity 1 22 0 2998 133 58 9 chr2 84140157 84140815 -169115768 + LTR1 LTR ERV1 1 785 0 458 236 0 31 chr2 84140907 84141034 -169115549 - MER103 DNA DNA -6 160 38 2444 68 7 7 chr2 84141223 84141533 -169115050 - AluY SINE Alu -1 310 1 2074 125 26 7 chr2 84141933 84142237 -169114346 - AluSg SINE Alu 0 310 1 638 251 91 9 chr2 84142481 84142700 -169113883 + MLT1E1 LTR MaLR 10 246 -408 771 138 0 0 chr2 84142709 84142832 -169113751 - L1MA1 LINE L1 0 6302 6180 2349 137 17 0 chr2 84142832 84143240 -169113343 + L1MA1 LINE L1 5559 5973 -329 899 224 137 12 chr2 84143274 84143595 -169112988 + MLT1E1 LTR MaLR 294 654 0 2096 98 3 78 chr2 84143596 84143931 -169112652 + AluSg SINE Alu 1 310 0 389 338 31 44 chr2 84143947 84144172 -169112411 - L1MEd LINE L1 -4896 1235 1014 1762 79 39 0 chr2 84144255 84144484 -169112099 + AluSq SINE Alu 1 238 -75 261 0 0 0 chr2 84144488 84144517 -169112066 + (A)n Simple_repeat Simple_repeat 1 29 0 532 243 94 60 chr2 84144520 84144787 -169111796 - L1MEd LINE L1 -5158 961 686 21 0 0 0 chr2 84144944 84144965 -169111618 + AT_rich Low_complexity Low_complexity 1 21 0 346 344 55 12 chr2 84145036 84145292 -169111291 - L1MEd LINE L1 -5772 347 81 215 293 0 73 chr2 84145366 84145448 -169111135 - L3 LINE CR1 -18 1559 1484 193 326 122 15 chr2 84145436 84145632 -169110951 - MIR SINE MIR 0 262 46 * 304 301 112 14 chr2 84145895 84146038 -169110545 - L3 LINE CR1 -360 1217 1061 1819 210 44 38 chr2 84146623 84147100 -169109483 - MLT1D LTR MaLR 0 505 26 404 286 134 38 chr2 84147600 84147838 -169108745 + MIR SINE MIR 2 262 0 206 320 136 62 chr2 84150015 84150581 -169106002 - L2 LINE L2 -987 2327 1720 222 344 70 21 chr2 84150993 84151179 -169105404 - MIR SINE MIR -12 250 56 231 222 8 205 chr2 84151859 84151976 -169104607 + MIR SINE MIR 48 141 -121 447 251 162 76 chr2 84152352 84152476 -169104107 + MLT1G1 LTR MaLR 67 179 -416 186 43 0 0 chr2 84152476 84152499 -169104084 + (TA)n Simple_repeat Simple_repeat 2 24 0 2390 58 0 10 chr2 84152499 84152788 -169103795 - AluY SINE Alu -25 286 1 447 251 162 76 chr2 84152788 84153154 -169103429 + MLT1G1 LTR MaLR 178 595 0 2141 92 44 0 chr2 84153666 84153959 -169102624 - AluY SINE Alu -5 306 1 1556 140 30 119 chr2 84154159 84154487 -169102096 - AluJo SINE Alu -13 299 1 186 367 86 44 chr2 84154671 84155395 -169101188 + L2 LINE L2 2069 2822 -492 245 302 95 43 chr2 84155693 84155809 -169100774 + L2 LINE L2 3182 3303 -10 668 190 88 74 chr2 84156452 84156668 -169099915 - MER58A DNA MER1_type -1 223 5 710 293 86 10 chr2 84157895 84158298 -169098285 + MLT1J2 LTR MaLR 2 448 -2 530 288 43 6 chr2 84158459 84158622 -169097961 - MIR SINE MIR -84 178 10 181 330 73 28 chr2 84159351 84159460 -169097123 - L2 LINE L2 -3 3310 3197 * 228 301 105 45 chr2 84159443 84159576 -169097007 - MIR SINE MIR -73 189 49 14521 170 33 14 chr2 84160114 84162496 -169094087 + L1M1 LINE L1 10 2347 -5218 242 29 29 0 chr2 84162496 84162531 -169094052 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 14521 170 33 14 chr2 84162531 84165126 -169091457 + L1M1 LINE L1 2347 5145 -2420 643 136 0 0 chr2 84165128 84165238 -169091345 + L1M1 LINE L1 5869 5978 -1587 272 29 0 0 chr2 84165242 84165276 -169091307 + L1MA1 LINE L1 3724 3757 -2389 291 57 0 0 chr2 84165276 84165311 -169091272 - THE1A LTR MaLR -1 354 320 1215 92 6 0 chr2 84165311 84165485 -169091098 - THE1B-int LTR MaLR -1405 175 1 1865 139 75 20 chr2 84165485 84165830 -169090753 - THE1B LTR MaLR 0 364 1 8016 162 17 11 chr2 84165830 84167128 -169089455 + L1MA1 LINE L1 3752 5066 -1238 2233 85 4 0 chr2 84167128 84167449 -169089134 + AluY SINE Alu 1 322 0 8016 162 17 11 chr2 84167449 84168160 -169088423 + L1MA1 LINE L1 5066 5771 -533 1835 130 45 9 chr2 84168273 84168603 -169087980 + L1MA1 LINE L1 5960 6301 -1 21 36 0 0 chr2 84168623 84168651 -169087932 + AT_rich Low_complexity Low_complexity 1 28 0 3488 159 64 29 chr2 84169206 84169908 -169086675 + LTR8A LTR ERV1 1 727 0 315 317 49 0 chr2 84169988 84170070 -169086513 + MIR SINE MIR 12 97 -165 13079 142 19 55 chr2 84170154 84173660 -169082923 + L1PA8 LINE L1 10 3429 -3032 6138 108 18 42 chr2 84173660 84175442 -169081141 + L1PA8 LINE L1 4715 6481 -6 484 292 15 0 chr2 84176021 84176151 -169080432 - MER58B DNA MER1_type -16 325 194 25 31 0 0 chr2 84176154 84176186 -169080397 + AT_rich Low_complexity Low_complexity 1 32 0 465 302 120 65 chr2 84176777 84177230 -169079353 + L2 LINE L2 1515 2007 -1307 504 132 0 0 chr2 84177230 84177306 -169079277 - MADE1 DNA Mariner 0 80 5 465 302 120 65 chr2 84177306 84177418 -169079165 + L2 LINE L2 2007 2111 -1203 2083 131 3 3 chr2 84179522 84179828 -169076755 + AluSx SINE Alu 5 310 -2 219 242 32 32 chr2 84180008 84180070 -169076513 + L2 LINE L2 3251 3312 -1 2332 177 29 5 chr2 84180730 84181148 -169075435 + MSTA LTR MaLR 1 428 0 320 274 179 0 chr2 84181623 84181729 -169074854 + L2 LINE L2 3148 3272 0 715 312 210 17 chr2 84182215 84182805 -169073778 - L2 LINE L2 -475 2839 2136 5884 241 57 41 chr2 84182995 84187179 -169069404 - L1MD1 LINE L1 0 6636 2385 1263 188 46 68 chr2 84187209 84187340 -169069243 - L1MA9 LINE L1 -38 6274 6142 2316 101 0 0 chr2 84187340 84187638 -169068945 + AluSc SINE Alu 1 298 -11 1263 188 46 68 chr2 84187638 84188043 -169068540 - L1MA9 LINE L1 -170 6142 5619 2253 174 43 20 chr2 84188045 84188793 -169067790 + L1MA9 LINE L1 4855 5614 -698 2168 204 155 6 chr2 84188795 84189512 -169067071 - L1MD1 LINE L1 -4146 2394 1571 5008 182 110 7 chr2 84189540 84191149 -169065434 - L1PA15 LINE L1 0 6165 4379 2507 275 65 23 chr2 84191153 84191895 -169064688 - L1PA13 LINE L1 -6014 773 1 4552 245 96 35 chr2 84191931 84192040 -169064543 - L1MD1 LINE L1 -4955 1585 1484 1015 93 37 0 chr2 84192040 84192201 -169064382 - L1MA5A LINE L1 -12 6285 6119 4552 245 96 35 chr2 84192201 84193571 -169063012 - L1MD1 LINE L1 -5056 1484 16 204 392 0 0 chr2 84193822 84193942 -169062641 - L2 LINE L2 -1442 1872 1753 235 362 16 16 chr2 84195079 84195206 -169061377 - L3 LINE CR1 -214 1363 1237 297 335 123 32 chr2 84195778 84196094 -169060489 - L3 LINE CR1 -397 1180 836 454 307 79 21 chr2 84196685 84196965 -169059618 + L1ME2 LINE L1 24 319 -6077 1096 141 6 6 chr2 84196976 84197146 -169059437 + AluSx SINE Alu 14 183 -129 2219 288 96 31 chr2 84197303 84200617 -169055966 + L1ME2 LINE L1 1679 5204 -1011 188 35 35 0 chr2 84200757 84200786 -169055797 + (TTATA)n Simple_repeat Simple_repeat 5 34 0 502 0 138 6 chr2 84200790 84200949 -169055634 + (TA)n Simple_repeat Simple_repeat 1 180 0 253 227 13 53 chr2 84200964 84201039 -169055544 - L1ME LINE L1 -635 5535 5464 1431 224 81 28 chr2 84201057 84201525 -169055058 + L1ME2 LINE L1 5599 6091 -142 1237 277 106 50 chr2 84201543 84202060 -169054523 - MLT1E2 LTR MaLR 0 626 81 418 255 117 0 chr2 84201955 84202100 -169054483 - MLT2C1 LTR ERVL -192 205 44 * 258 314 29 0 chr2 84202154 84202259 -169054324 + L1ME2 LINE L1 6117 6224 -9 358 165 68 19 chr2 84202692 84202795 -169053788 - Charlie5 DNA MER1_type 0 2619 2512 1047 239 5 5 chr2 84203172 84203385 -169053198 + MER58A DNA MER1_type 6 218 -6 506 180 0 74 chr2 84203395 84203517 -169053066 + Charlie5 DNA MER1_type 7 119 -2493 251 191 0 0 chr2 84203519 84203566 -169053017 - MLT2D LTR ERVL -1 463 417 890 233 74 22 chr2 84203626 84203896 -169052687 - MLT2D LTR ERVL -48 366 83 353 128 105 0 chr2 84203940 84204045 -169052538 + Charlie5 DNA MER1_type 2359 2514 -98 629 190 23 11 chr2 84204473 84204647 -169051936 + CT-rich Low_complexity Low_complexity 1 176 0 365 315 42 6 chr2 84205630 84205795 -169050788 + LTR16C LTR ERVL 320 490 -1 1595 165 107 26 chr2 84206853 84207199 -169049384 + MLT1A2 LTR MaLR 1 374 0 247 367 17 17 chr2 84208320 84208440 -169048143 - L2 LINE L2 -7 3265 3146 339 355 0 0 chr2 84208707 84208817 -169047766 - MIR SINE MIR -67 141 32 2285 109 0 6 chr2 84209884 84210196 -169046387 + AluSg SINE Alu 1 310 0 879 302 75 29 chr2 84211266 84211677 -169044906 + MLT1K LTR MaLR 10 439 -149 726 272 54 22 chr2 84211689 84211913 -169044670 - MIR SINE MIR -31 231 1 28 29 0 0 chr2 84212423 84212458 -169044125 + AT_rich Low_complexity Low_complexity 1 35 0 2117 181 18 36 chr2 84212713 84212815 -169043768 - Tigger2a DNA MER2_type -2274 434 332 557 75 0 12 chr2 84212815 84212895 -169043688 + MADE1 DNA Mariner 1 79 -1 2117 181 18 36 chr2 84212895 84213233 -169043350 - Tigger2a DNA MER2_type -2376 332 2 325 276 59 40 chr2 84215922 84216180 -169040403 - L1MEd LINE L1 -5079 1050 800 25 65 0 0 chr2 84216253 84216299 -169040284 + AT_rich Low_complexity Low_complexity 1 46 0 312 232 111 0 chr2 84217489 84217588 -169038995 + MER103 DNA DNA 55 164 -2 315 328 53 8 chr2 84217910 84218041 -169038542 - MIR SINE MIR -71 191 55 320 176 29 69 chr2 84218275 84218377 -169038206 - MIR SINE MIR -1 261 164 221 327 150 36 chr2 84218413 84218633 -169037950 - MIR SINE MIR -15 247 3 274 335 96 8 chr2 84219340 84219644 -169036939 + MLT1I LTR MaLR 59 409 0 336 24 0 0 chr2 84220298 84220339 -169036244 + (TG)n Simple_repeat Simple_repeat 1 41 0 437 208 42 33 chr2 84221277 84221397 -169035186 + MLT1C LTR MaLR 10 130 -337 288 53 0 0 chr2 84222414 84222452 -169034131 + (TG)n Simple_repeat Simple_repeat 2 39 0 2293 217 55 73 chr2 84222452 84223231 -169033352 - L1MD2 LINE L1 -227 6132 5368 961 294 25 7 chr2 84223273 84223559 -169033024 - MER110 LTR ERV1 -30 461 171 34 0 0 0 chr2 84223604 84223638 -169032945 + AT_rich Low_complexity Low_complexity 1 34 0 230 340 53 26 chr2 84223785 84224126 -169032457 - L1 LINE L1 -2318 3828 3479 842 287 15 4 chr2 84224548 84224809 -169031774 + LTR16A LTR ERVL 181 444 -6 1541 244 59 99 chr2 84226803 84227417 -169029166 + MLT1E LTR MaLR 3 591 -2 1907 141 40 45 chr2 84229573 84229950 -169026633 + THE1C LTR MaLR 1 375 0 2087 108 10 7 chr2 84230479 84230776 -169025807 - AluSc SINE Alu -11 298 1 202 308 55 55 chr2 84231721 84231812 -169024771 + MER5A DNA MER1_type 99 189 0 269 218 138 34 chr2 84233155 84233300 -169023283 - MIR SINE MIR -58 204 20 721 276 94 31 chr2 84233599 84234133 -169022450 - MLT1H LTR MaLR -1 554 11 456 333 112 35 chr2 84234196 84234544 -169022039 - L2 LINE L2 -12 3301 2927 22 35 0 0 chr2 84235108 84235137 -169021446 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr2 84235947 84235970 -169020613 + AT_rich Low_complexity Low_complexity 1 23 0 2215 130 0 0 chr2 84236156 84236456 -169020127 - AluSx SINE Alu -12 300 1 200 299 78 13 chr2 84236733 84236810 -169019773 + L2 LINE L2 3149 3230 -42 1995 154 0 0 chr2 84238840 84239126 -169017457 + AluSg SINE Alu 1 286 -24 476 323 30 18 chr2 84239604 84239768 -169016815 - LTR33 LTR ERVL -304 217 52 5556 182 22 16 chr2 84240230 84241831 -169014752 + L1MA4A LINE L1 4170 5782 -521 23949 65 19 0 chr2 84241847 84245784 -169010799 + L1PA6 LINE L1 2139 6151 -3 2541 146 57 16 chr2 84245801 84246308 -169010275 + L1MA4A LINE L1 5769 6296 -7 284 261 34 13 chr2 84246338 84246528 -169010055 - LTR37B LTR ERV1 -81 383 198 235 248 34 17 chr2 84246912 84247029 -169009554 + (TA)n Simple_repeat Simple_repeat 2 120 0 22 35 0 0 chr2 84247188 84247217 -169009366 + AT_rich Low_complexity Low_complexity 1 29 0 635 237 53 0 chr2 84247420 84247551 -169009032 + Tigger7 DNA MER2_type 129 266 -284 571 163 10 10 chr2 84247550 84247648 -169008935 + Tigger7 DNA MER2_type 2490 2587 0 * 28617 134 9 59 chr2 84247967 84248397 -169008186 + L1PA8A LINE L1 3 453 -5678 189 0 0 0 chr2 84248397 84248418 -169008165 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 28617 134 9 59 chr2 84248418 84254195 -169002388 + L1PA8A LINE L1 453 5889 -242 336 115 0 0 chr2 84254292 84254344 -169002239 - L1PA8 LINE L1 -8 6164 6113 555 307 53 21 chr2 84255304 84255493 -169001090 - MER82 DNA MER2_type -25 628 434 242 339 34 10 chr2 84255503 84255638 -169000945 + MIR SINE MIR 18 154 -54 334 264 22 11 chr2 84255768 84255859 -169000724 - MER82 DNA MER2_type -561 92 1 1457 287 43 16 chr2 84256149 84256640 -168999943 - REP3 LTR ERV -37 525 22 282 95 0 0 chr2 84257245 84257287 -168999296 + (CA)n Simple_repeat Simple_repeat 1 42 0 2314 109 0 0 chr2 84257487 84257799 -168998784 + AluSx SINE Alu 1 312 0 261 320 24 8 chr2 84257820 84257945 -168998638 + L1MC4a LINE L1 4466 4592 -1554 271 253 126 0 chr2 84258226 84258321 -168998262 + L1P LINE L1 4904 5010 -1136 22 35 0 0 chr2 84258548 84258577 -168998006 + AT_rich Low_complexity Low_complexity 1 29 0 589 214 81 71 chr2 84258613 84258719 -168997864 + L1MC4a LINE L1 5282 5385 -781 2428 63 3 0 chr2 84258719 84259019 -168997564 + AluY SINE Alu 1 301 -10 589 214 81 71 chr2 84259019 84259229 -168997354 + L1MC4a LINE L1 5385 5599 -567 423 254 113 47 chr2 84259246 84259502 -168997081 + L1MC4a LINE L1 5694 5966 -1842 348 198 18 9 chr2 84260475 84260586 -168995997 + (TA)n Simple_repeat Simple_repeat 1 112 0 1200 222 86 11 chr2 84260617 84260896 -168995687 - MER39 LTR ERV1 -51 656 357 261 299 110 12 chr2 84260864 84261011 -168995572 - MER39 LTR ERV1 -359 183 24 * 217 196 20 20 chr2 84261016 84261067 -168995516 + (CATATA)n Simple_repeat Simple_repeat 6 56 0 308 135 67 56 chr2 84261071 84261160 -168995423 - L1MC4 LINE L1 -1339 6703 6614 247 268 207 24 chr2 84261386 84261550 -168995033 + MIR SINE MIR 65 258 -4 390 361 43 4 chr2 84263324 84263554 -168993029 + L1MEd LINE L1 488 726 -5393 281 274 44 18 chr2 84263706 84263819 -168992764 + L1ME1 LINE L1 6042 6157 -9 330 285 70 16 chr2 84263867 84264109 -168992474 + L1MEd LINE L1 2938 3192 -2937 239 277 140 70 chr2 84264504 84264809 -168991774 + L2 LINE L2 2222 2549 -765 667 249 67 6 chr2 84264809 84264974 -168991609 - MER5B DNA MER1_type 0 178 4 197 392 32 32 chr2 84265342 84265467 -168991116 + L2 LINE L2 2943 3067 -205 2241 100 13 0 chr2 84265489 84265789 -168990794 - AluSx SINE Alu -8 304 1 356 291 146 18 chr2 84268604 84268769 -168987814 + MIR SINE MIR 23 208 -54 207 340 29 0 chr2 84268887 84268990 -168987593 + MIR SINE MIR 24 129 -79 1061 275 55 45 chr2 84271084 84271705 -168984878 + L1MCa LINE L1 871 1497 -4929 624 280 80 17 chr2 84271694 84271933 -168984650 + L1ME1 LINE L1 5804 6057 -109 * 50 42 0 0 chr2 84271933 84272004 -168984579 + AT_rich Low_complexity Low_complexity 1 71 0 11312 168 17 7 chr2 84272004 84275279 -168981304 - L1MA2 LINE L1 0 6304 2997 298 303 46 0 chr2 84275286 84275395 -168981188 + L1ME1 LINE L1 6051 6164 -2 21 0 0 0 chr2 84275494 84275515 -168981068 + AT_rich Low_complexity Low_complexity 1 21 0 2208 112 3 0 chr2 84275523 84275817 -168980766 + AluSx SINE Alu 17 311 -1 285 342 9 18 chr2 84275927 84276038 -168980545 - MIR3 SINE MIR -41 167 58 2063 72 0 7 chr2 84276637 84276915 -168979668 + AluY SINE Alu 2 277 -34 1042 189 11 0 chr2 84276954 84277139 -168979444 - AluJb SINE Alu -8 304 118 753 293 72 52 chr2 84277486 84277944 -168978639 + LTR33 LTR ERVL 1 467 -54 22 0 0 0 chr2 84278226 84278248 -168978335 + AT_rich Low_complexity Low_complexity 1 22 0 304 273 50 29 chr2 84279097 84279236 -168977347 - MLT1J1 LTR MaLR -52 394 253 2174 113 3 0 chr2 84279822 84280123 -168976460 + AluSg SINE Alu 5 306 -4 22 0 0 0 chr2 84280581 84280603 -168975980 + AT_rich Low_complexity Low_complexity 1 22 0 340 24 0 0 chr2 84280617 84280658 -168975925 - MLT2A1 LTR ERVL 0 453 413 381 58 0 0 chr2 84280658 84280710 -168975873 + (TA)n Simple_repeat Simple_repeat 2 53 0 2461 85 12 6 chr2 84280717 84281058 -168975525 - MLT2A1 LTR ERVL -101 343 1 401 143 0 0 chr2 84281790 84281853 -168974730 + AluJ/FRAM SINE Alu 232 294 -18 386 348 77 18 chr2 84282759 84282980 -168973603 + MIR SINE MIR 2 235 -27 1009 193 21 26 chr2 84283958 84284150 -168972433 + AluJo SINE Alu 2 192 -120 187 333 206 16 chr2 84284651 84284777 -168971806 + MER5A DNA MER1_type 16 165 -24 * 205 340 132 9 chr2 84284672 84284778 -168971805 - MER5A DNA MER1_type -25 164 46 1255 225 100 14 chr2 84285247 84285598 -168970985 - LTR50 LTR ERVL -6 789 409 432 174 0 35 chr2 84285733 84285819 -168970764 + MLT2D LTR ERVL 1 83 -331 * 977 213 169 30 chr2 84285797 84286163 -168970420 - LTR50 LTR ERVL -296 499 83 1430 244 22 85 chr2 84287041 84287536 -168969047 + MLT2B1 LTR ERVL 1 464 -56 29 47 0 0 chr2 84287555 84287598 -168968985 + AT_rich Low_complexity Low_complexity 1 43 0 357 95 18 15 chr2 84287601 84287678 -168968905 + MLT2D LTR ERVL 367 414 0 187 300 90 10 chr2 84288053 84288153 -168968430 + MIR3 SINE MIR 101 208 0 210 71 0 0 chr2 84288409 84288437 -168968146 + (T)n Simple_repeat Simple_repeat 1 28 0 347 342 0 0 chr2 84288732 84288849 -168967734 + MER103 DNA DNA 2 118 -48 256 302 56 22 chr2 84289324 84289503 -168967080 - L1MC/D LINE L1 -2072 5736 5552 26 0 0 0 chr2 84289529 84289555 -168967028 + AT_rich Low_complexity Low_complexity 1 26 0 561 9 85 0 chr2 84289565 84289671 -168966912 + (TTTAA)n Simple_repeat Simple_repeat 2 116 0 22 35 0 0 chr2 84289727 84289756 -168966827 + AT_rich Low_complexity Low_complexity 1 29 0 1839 157 7 7 chr2 84289818 84290117 -168966466 + AluSx SINE Alu 5 303 -9 22 35 0 0 chr2 84290586 84290615 -168965968 + AT_rich Low_complexity Low_complexity 1 29 0 320 83 71 12 chr2 84291332 84291416 -168965167 + (TA)n Simple_repeat Simple_repeat 1 89 0 314 256 33 11 chr2 84291418 84291508 -168965075 + L1MC4 LINE L1 6612 6703 -1339 237 224 17 0 chr2 84291513 84291571 -168965012 - L1MCa LINE L1 -4362 2064 2006 * 270 264 0 22 chr2 84291568 84291659 -168964924 + L1MC4 LINE L1 6614 6702 -1340 268 256 47 0 chr2 84291610 84291696 -168964887 - L1MC4 LINE L1 -1339 6703 6614 * 228 239 0 14 chr2 84291677 84291748 -168964835 - L1MCa LINE L1 -4362 2064 1995 * 246 216 0 0 chr2 84291724 84291775 -168964808 - L1MC4 LINE L1 -1339 6983 6933 375 250 0 0 chr2 84291776 84291876 -168964707 + (CATA)n Simple_repeat Simple_repeat 4 103 0 239 298 0 43 chr2 84291884 84291978 -168964605 - L1MC4 LINE L1 -1339 6703 6614 * 261 312 0 0 chr2 84291964 84292057 -168964526 + L1MC4 LINE L1 6614 6706 -1336 233 271 47 0 chr2 84291992 84292077 -168964506 - L1MC4 LINE L1 -1339 6703 6615 * 255 259 47 0 chr2 84292094 84292179 -168964404 - L1MC4 LINE L1 -1339 6703 6615 * 256 270 45 0 chr2 84292104 84292193 -168964390 + L1MC4 LINE L1 6614 6706 -1336 237 196 0 0 chr2 84292196 84292247 -168964336 + (TA)n Simple_repeat Simple_repeat 1 51 0 644 240 41 0 chr2 84292248 84292444 -168964139 - L1M4c LINE L1 -4164 2220 2017 7551 235 65 55 chr2 84292456 84292872 -168963711 + L1M4 LINE L1 2372 2782 -3396 493 31 0 0 chr2 84292872 84292936 -168963647 + AluY SINE Alu 234 297 -12 7551 235 65 55 chr2 84292936 84295553 -168961030 + L1M4 LINE L1 2782 5497 -681 232 333 13 0 chr2 84295554 84295632 -168960951 - MER2 DNA MER2_type 0 345 267 258 32 0 0 chr2 84295851 84295882 -168960701 + (TTCC)n Simple_repeat Simple_repeat 2 32 0 509 326 153 14 chr2 84296170 84296523 -168960060 + L2 LINE L2 2912 3313 0 219 274 11 42 chr2 84298058 84298153 -168958430 + L2 LINE L2 3104 3195 -118 616 172 0 0 chr2 84298239 84298338 -168958245 + FLAM_A SINE Alu 2 100 -42 471 302 63 40 chr2 84298987 84299239 -168957344 - L1ME3A LINE L1 -231 5939 5682 237 159 0 0 chr2 84299489 84299533 -168957050 + GA-rich Low_complexity Low_complexity 4 47 0 2142 169 34 10 chr2 84300941 84301348 -168955235 - MER47B DNA MER2_type -1 417 1 720 118 47 5 chr2 84301826 84302038 -168954545 + (TA)n Simple_repeat Simple_repeat 1 221 0 3595 242 87 29 chr2 84302038 84302575 -168954008 - L1M4c LINE L1 -4176 2470 1965 1503 149 226 6 chr2 84302575 84302924 -168953659 + MSTA LTR MaLR 3 428 0 3595 242 87 29 chr2 84302924 84303799 -168952784 - L1M4c LINE L1 -4681 1965 1142 2073 127 3 3 chr2 84303799 84304099 -168952484 - AluSx SINE Alu -8 304 5 3595 242 87 29 chr2 84304099 84304928 -168951655 - L1M4c LINE L1 -5504 1142 66 240 35 0 0 chr2 84305644 84305657 -168950926 + (CA)n Simple_repeat Simple_repeat 1 42 0 240 35 0 0 chr2 84305657 84305686 -168950897 + (CA)n Simple_repeat Simple_repeat 2 30 0 210 37 0 0 chr2 84305829 84305856 -168950727 + (CA)n Simple_repeat Simple_repeat 2 28 0 * 459 35 0 0 chr2 84305855 84305912 -168950671 + (GA)n Simple_repeat Simple_repeat 2 58 0 563 292 39 0 chr2 84306818 84306972 -168949611 + MER5B DNA MER1_type 16 175 -3 332 161 0 0 chr2 84306978 84307040 -168949543 + LTR28 LTR ERV1 1 62 -958 * 2146 158 60 10 chr2 84307009 84307408 -168949175 + MER61C LTR ERV1 16 434 0 206 271 104 31 chr2 84307415 84307511 -168949072 - MER5A DNA MER1_type -6 183 81 562 198 105 37 chr2 84307588 84307750 -168948833 + MER5A DNA MER1_type 17 189 0 203 348 54 11 chr2 84308009 84308101 -168948482 + MIR SINE MIR 20 115 -93 341 370 49 27 chr2 84308321 84308545 -168948038 + L1ME3A LINE L1 46 274 -5771 348 278 60 8 chr2 84308546 84308679 -168947904 + L1ME3A LINE L1 3843 3982 -2582 2885 163 19 23 chr2 84308724 84309295 -168947288 + L1MD1 LINE L1 5655 6223 -19 225 314 23 23 chr2 84309544 84309630 -168946953 + L1ME3A LINE L1 5930 6015 -2211 22 0 0 0 chr2 84310832 84310854 -168945729 + AT_rich Low_complexity Low_complexity 1 22 0 473 227 18 61 chr2 84310855 84311018 -168945565 + LTR52 LTR ERVL 1 156 -265 1878 214 125 68 chr2 84311203 84311834 -168944749 + LTR52-int LTR ERVL 3 669 -2887 411 186 0 52 chr2 84311860 84311957 -168944626 + LTR52-int LTR ERVL 846 937 -2619 5125 172 93 0 chr2 84312037 84313055 -168943528 + L1MA2 LINE L1 1466 2578 -4987 5846 91 17 66 chr2 84313062 84314213 -168942370 - MER11B LTR ERVK 0 1071 1 12796 172 29 10 chr2 84314215 84316156 -168940427 + L1MA2 LINE L1 2584 4488 -3235 2088 135 3 0 chr2 84316156 84316460 -168940123 - AluSx SINE Alu -5 307 3 12796 172 29 10 chr2 84316460 84319561 -168937022 + L1MA2 LINE L1 4488 7723 0 918 214 11 0 chr2 84319569 84319756 -168936827 + LTR52-int LTR ERVL 1258 1446 -4239 365 331 49 0 chr2 84319808 84319992 -168936591 - L1M4 LINE L1 -1209 4937 4745 640 265 29 6 chr2 84320188 84320358 -168936225 + MER5B DNA MER1_type 4 177 -1 235 260 0 0 chr2 84320483 84320533 -168936050 + CT-rich Low_complexity Low_complexity 3 52 0 219 342 44 0 chr2 84322101 84322215 -168934368 + MIR SINE MIR 71 189 -73 944 310 82 40 chr2 84322441 84323295 -168933288 - L2 LINE L2 0 3313 2416 463 296 81 5 chr2 84323734 84323957 -168932626 + L1ME3A LINE L1 6030 6269 -319 24 0 0 0 chr2 84324039 84324063 -168932520 + AT_rich Low_complexity Low_complexity 1 24 0 2500 57 3 19 chr2 84324372 84324688 -168931895 + AluY SINE Alu 1 311 0 6639 112 13 8 chr2 84324998 84326161 -168930422 + L1MA1 LINE L1 5130 6299 -3 26 0 0 0 chr2 84326167 84326193 -168930390 + AT_rich Low_complexity Low_complexity 1 26 0 519 160 25 17 chr2 84326200 84326319 -168930264 + L1MB8 LINE L1 6059 6178 0 359 255 119 31 chr2 84326352 84326893 -168929690 - Charlie7 DNA MER1_type -306 2306 1669 195 147 59 0 chr2 84327012 84327114 -168929469 + (TA)n Simple_repeat Simple_repeat 2 109 0 275 200 46 23 chr2 84327121 84327251 -168929332 + (TTATA)n Simple_repeat Simple_repeat 2 134 0 615 82 58 27 chr2 84327258 84327552 -168929031 + (TA)n Simple_repeat Simple_repeat 1 303 0 2404 64 0 3 chr2 84327553 84327850 -168928733 - AluY SINE Alu -15 296 1 276 168 84 8 chr2 84327850 84327969 -168928614 + (TA)n Simple_repeat Simple_repeat 2 129 0 195 225 0 0 chr2 84328549 84328589 -168927994 + L2 LINE L2 3270 3309 -4 213 339 15 0 chr2 84330464 84330529 -168926054 + L3 LINE CR1 774 839 -738 4152 123 10 8 chr2 84330630 84331241 -168925342 + LTR9 LTR ERV1 1 612 0 222 156 0 0 chr2 84332441 84332486 -168924097 + (CAT)n Simple_repeat Simple_repeat 3 47 0 2238 100 3 0 chr2 84332720 84333010 -168923573 + AluSp SINE Alu 1 291 -22 345 328 24 0 chr2 84333048 84333173 -168923410 + MIR SINE MIR 1 128 -134 335 221 35 12 chr2 84333173 84333259 -168923324 + Tigger5 DNA MER2_type 2236 2323 0 242 209 0 0 chr2 84333259 84333302 -168923281 + Tigger5 DNA MER2_type 13 55 -2268 282 131 279 0 chr2 84333312 84333373 -168923210 + Tigger5 DNA MER2_type 2237 2314 -9 390 204 112 20 chr2 84333381 84333479 -168923104 + MIR SINE MIR 133 239 -23 195 184 0 0 chr2 84333489 84333527 -168923056 + (ATG)n Simple_repeat Simple_repeat 1 38 0 2290 102 7 0 chr2 84333665 84333959 -168922624 - AluSx SINE Alu -16 296 1 842 296 29 0 chr2 84334046 84334289 -168922294 - MIR SINE MIR 0 262 13 192 40 0 0 chr2 84334808 84334833 -168921750 + (TC)n Simple_repeat Simple_repeat 2 26 0 237 167 21 0 chr2 84335705 84335753 -168920830 - MIR SINE MIR -54 208 160 24 0 0 0 chr2 84336522 84336546 -168920037 + AT_rich Low_complexity Low_complexity 1 24 0 475 277 90 4 chr2 84336577 84336844 -168919739 - LTR16B LTR ERVL -51 413 124 871 211 16 0 chr2 84337722 84337907 -168918676 + MER5A DNA MER1_type 1 188 -1 270 132 0 0 chr2 84338282 84338335 -168918248 + (T)n Simple_repeat Simple_repeat 1 53 0 1402 211 21 14 chr2 84339359 84339648 -168916935 - AluJo SINE Alu -21 291 1 189 74 0 0 chr2 84339887 84339914 -168916669 + (TAGA)n Simple_repeat Simple_repeat 4 30 0 338 239 97 8 chr2 84340324 84340458 -168916125 + L1ME4a LINE L1 5974 6119 -2 2098 134 7 0 chr2 84340527 84340832 -168915751 + AluSx SINE Alu 1 307 -5 181 289 0 0 chr2 84340850 84340895 -168915688 - L2 LINE L2 -4 3309 3265 657 261 55 46 chr2 84341460 84341678 -168914905 - MER93a LTR ERV1 0 402 183 1824 273 23 27 chr2 84341873 84342642 -168913941 - L1PA12 LINE L1 -4673 2907 2203 367 288 8 8 chr2 84343332 84343464 -168913119 - L1PA12 LINE L1 -5276 2298 2167 839 386 19 19 chr2 84343511 84344097 -168912486 - L1PA12 LINE L1 -6200 1374 789 205 255 20 0 chr2 84344127 84344178 -168912405 + CT-rich Low_complexity Low_complexity 3 54 0 461 188 12 0 chr2 84344267 84344352 -168912231 + Tigger1 DNA MER2_type 2131 2216 -202 445 179 8 17 chr2 84344379 84344496 -168912087 + L1PA15-16 LINE L1 2078 2193 -4656 13563 152 18 17 chr2 84344501 84344624 -168911959 - Tigger1 DNA MER2_type 0 2418 2297 1665 213 3 0 chr2 84344624 84344925 -168911658 + AluJo SINE Alu 1 302 -10 13563 152 18 17 chr2 84344925 84347217 -168909366 - Tigger1 DNA MER2_type -121 2297 1 258 272 142 6 chr2 84348158 84348320 -168908263 - LTR33A LTR ERVL -6 517 334 513 276 53 27 chr2 84348391 84348616 -168907967 - LTR33A LTR ERVL -292 231 1 2059 197 97 4 chr2 84348669 84349131 -168907452 + MLT1D LTR MaLR 1 505 0 180 0 0 0 chr2 84350057 84350077 -168906506 + (A)n Simple_repeat Simple_repeat 1 20 0 301 257 69 62 chr2 84350467 84350611 -168905972 + MIR SINE MIR 95 239 -23 5645 67 44 13 chr2 84350913 84351670 -168904913 + LTR17 LTR ERV1 1 780 0 225 0 0 0 chr2 84352457 84352482 -168904101 + (TTTTG)n Simple_repeat Simple_repeat 4 28 0 247 193 0 0 chr2 84352832 84352889 -168903694 + (TA)n Simple_repeat Simple_repeat 1 57 0 652 189 42 0 chr2 84353062 84353205 -168903378 + LTR37A LTR ERV1 19 167 -259 533 180 23 16 chr2 84353284 84353412 -168903171 + LTR37A LTR ERV1 298 426 0 283 224 0 0 chr2 84353913 84353971 -168902612 - MIR3 SINE MIR -23 185 128 1397 180 11 4 chr2 84354455 84354733 -168901850 + MER49 LTR ERV1 1 280 -643 1383 193 27 54 chr2 84354729 84355121 -168901462 + MER4D LTR ERV1 488 903 0 * 215 271 0 17 chr2 84355270 84355329 -168901254 + L2 LINE L2 3161 3218 -95 2697 86 58 21 chr2 84355397 84355829 -168900754 - LTR7 LTR ERV1 -2 448 1 2429 69 48 13 chr2 84355829 84356206 -168900377 - HERVH LTR ERV1 0 7713 7324 18378 112 16 15 chr2 84356206 84359392 -168897191 - HERVH LTR ERV1 -1894 5819 1 1799 96 249 25 chr2 84359394 84359760 -168896823 - LTR7 LTR ERV1 -2 448 1 372 62 47 0 chr2 84360678 84360742 -168895841 + (CA)n Simple_repeat Simple_repeat 1 67 0 30 0 0 0 chr2 84360923 84360953 -168895630 + AT_rich Low_complexity Low_complexity 1 30 0 235 196 0 0 chr2 84361069 84361120 -168895463 - LTR66 LTR ERVL -168 442 392 367 188 15 144 chr2 84361144 84361162 -168895421 - MIR SINE MIR -55 207 188 339 25 0 0 chr2 84361162 84361202 -168895381 + (CA)n Simple_repeat Simple_repeat 2 41 0 367 188 15 144 chr2 84361202 84361254 -168895329 - MIR SINE MIR -74 188 131 194 0 39 0 chr2 84361254 84361280 -168895303 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2867 24 0 0 chr2 84361283 84361619 -168894964 - L1PA2 LINE L1 -4 6151 5816 367 188 15 144 chr2 84361619 84361703 -168894880 - MIR SINE MIR -133 129 64 288 325 132 24 chr2 84361705 84361869 -168894714 - MIR SINE MIR -61 147 20 183 353 69 20 chr2 84362812 84362914 -168893669 - L3b LINE CR1 -42 1541 1435 29 60 0 0 chr2 84363208 84363258 -168893325 + AT_rich Low_complexity Low_complexity 1 50 0 238 315 0 0 chr2 84363443 84363516 -168893067 + MIR SINE MIR 184 256 -6 391 397 29 0 chr2 84363904 84364078 -168892505 - MIR SINE MIR -48 214 36 2225 191 24 5 chr2 84364162 84364580 -168892003 - MSTB LTR MaLR 0 426 1 1231 219 59 0 chr2 84365013 84365283 -168891300 + MER58B DNA MER1_type 56 341 0 379 205 36 12 chr2 84365803 84365886 -168890697 - MLT1B LTR MaLR -2 388 304 290 85 0 21 chr2 84366129 84366176 -168890407 + (TTCC)n Simple_repeat Simple_repeat 3 48 0 358 241 17 103 chr2 84366667 84366841 -168889742 - MER58C DNA MER1_type -6 209 51 2126 132 0 3 chr2 84366882 84367185 -168889398 - AluSg SINE Alu -6 304 3 287 247 25 12 chr2 84367655 84367736 -168888847 - LTR58 LTR ERV1 -239 440 359 629 254 47 5 chr2 84368034 84368247 -168888336 - MER69 DNA AcHobo -1 2525 2304 1395 231 42 90 chr2 84368295 84368595 -168887988 - MER69 DNA AcHobo -228 2298 1985 1090 236 88 54 chr2 84368595 84369039 -168887544 - LTR40c LTR ERVL -2 463 5 1395 231 42 90 chr2 84369039 84369511 -168887072 - MER69 DNA AcHobo -541 1985 1562 2197 63 0 7 chr2 84369511 84369780 -168886803 + AluY SINE Alu 35 301 -10 1395 231 42 90 chr2 84369780 84369791 -168886792 - MER69 DNA AcHobo -964 1562 1552 838 290 26 29 chr2 84369791 84370101 -168886482 - LTR16C LTR ERVL -2 489 181 356 299 124 23 chr2 84370321 84370498 -168886085 - MER69 DNA AcHobo -944 282 88 807 305 17 65 chr2 84372438 84372855 -168883728 - L2 LINE L2 -47 3266 2870 21 57 0 0 chr2 84373796 84373831 -168882752 + AT_rich Low_complexity Low_complexity 1 35 0 4042 304 23 9 chr2 84425733 84426862 -168829721 + L1 LINE L1 159 1303 -5350 25 65 0 0 chr2 84427015 84427061 -168829522 + AT_rich Low_complexity Low_complexity 1 46 0 236 239 45 0 chr2 84427115 84427182 -168829401 - L1ME3A LINE L1 -88 6082 6013 213 163 23 0 chr2 84427483 84427526 -168829057 + (TA)n Simple_repeat Simple_repeat 1 44 0 4765 145 10 5 chr2 84427597 84428383 -168828200 - L1PA15 LINE L1 -2 6163 5374 286 311 63 0 chr2 84428575 84428813 -168827770 + L1ME LINE L1 753 1005 -5065 22 56 0 0 chr2 84428904 84428940 -168827643 + AT_rich Low_complexity Low_complexity 1 36 0 1756 291 47 16 chr2 84428942 84429622 -168826961 + L1ME1 LINE L1 5320 6020 -146 473 299 62 6 chr2 84429745 84429922 -168826661 + L2 LINE L2 1859 2045 -1269 392 333 63 41 chr2 84429937 84430038 -168826545 - L1M4 LINE L1 -1905 4241 4144 2300 103 0 0 chr2 84430038 84430338 -168826245 - AluY SINE Alu -7 304 5 392 333 63 41 chr2 84430338 84430602 -168825981 - L1M4 LINE L1 -2002 4144 3868 371 341 114 53 chr2 84430854 84431100 -168825483 - L1MEd LINE L1 -5733 386 126 684 259 82 18 chr2 84432286 84432568 -168824015 + LTR37A LTR ERV1 21 320 -106 4349 237 62 25 chr2 84432680 84434441 -168822142 + L1 LINE L1 2460 4356 -2376 2156 121 0 0 chr2 84434627 84434924 -168821659 - AluSg SINE Alu -13 297 1 562 258 115 46 chr2 84434979 84435196 -168821387 - MIR SINE MIR 0 262 31 23 65 0 16 chr2 84435591 84435619 -168820964 + AT_rich Low_complexity Low_complexity 1 28 -33 595 246 0 0 chr2 84435619 84435741 -168820842 + FLAM_A SINE Alu 4 125 -8 23 65 0 16 chr2 84435741 84435774 -168820809 + AT_rich Low_complexity Low_complexity 28 61 0 336 255 135 7 chr2 84435840 84435981 -168820602 - L1M4 LINE L1 -767 5379 5221 23 0 0 0 chr2 84435981 84436004 -168820579 + AT_rich Low_complexity Low_complexity 1 23 0 2049 104 4 4 chr2 84436339 84436638 -168819945 - AluSg SINE Alu 0 299 1 26 50 0 0 chr2 84436843 84436883 -168819700 + AT_rich Low_complexity Low_complexity 1 40 0 547 245 0 7 chr2 84437023 84437166 -168819417 - L1MDb LINE L1 -5257 1152 1011 4236 112 16 20 chr2 84437266 84437973 -168818610 + L1MA2 LINE L1 5599 6302 -2 1770 319 28 20 chr2 84438088 84438727 -168817856 + L1MDb LINE L1 7 650 -5759 2561 199 27 6 chr2 84438892 84439414 -168817169 + L1MB8 LINE L1 5477 6009 -165 395 186 35 44 chr2 84439503 84439616 -168816967 + L1MB8 LINE L1 6028 6139 -39 * 461 230 20 0 chr2 84439599 84439699 -168816884 + L1MDb LINE L1 800 901 -5508 1201 128 9 71 chr2 84439732 84439958 -168816625 - AluSg/x SINE Alu -10 302 91 302 261 0 0 chr2 84440116 84440181 -168816402 + L1M4 LINE L1 3495 3559 -2587 27 0 0 0 chr2 84440185 84440212 -168816371 + AT_rich Low_complexity Low_complexity 1 27 0 1130 90 10 65 chr2 84440212 84440367 -168816216 - L1MA2 LINE L1 0 6304 6161 1557 201 31 0 chr2 84440367 84440655 -168815928 + AluJb SINE Alu 1 297 -15 1130 90 10 65 chr2 84440655 84440700 -168815883 - L1MA2 LINE L1 -143 6161 6115 3514 71 0 4 chr2 84441727 84442193 -168814390 - L1PA7 LINE L1 0 6154 5691 37 81 0 0 chr2 84442339 84442425 -168814158 + AT_rich Low_complexity Low_complexity 1 86 0 317 117 54 9 chr2 84443522 84443633 -168812950 + (TA)n Simple_repeat Simple_repeat 2 117 0 7594 232 64 45 chr2 84443633 84446027 -168810556 + L1MDa LINE L1 59 2496 -4044 442 232 80 84 chr2 84446067 84446330 -168810253 + L1MDa LINE L1 3084 3345 -3195 1502 286 30 58 chr2 84446918 84447709 -168808874 - L1ME3A LINE L1 -13 6157 5389 469 309 83 3 chr2 84447722 84448049 -168808534 - L1ME3A LINE L1 -836 5310 4958 535 356 16 0 chr2 84448236 84448427 -168808156 + L1MEc LINE L1 135 328 -6068 1666 302 66 15 chr2 84448430 84449435 -168807148 + L1MEc LINE L1 418 1436 -4779 5776 178 67 8 chr2 84449548 84451978 -168804605 - L1PBa LINE L1 -4400 1804 1 4249 216 13 23 chr2 84451977 84452982 -168803601 - L1 LINE L1 -1653 4493 3499 * 6128 38 5 0 chr2 84452982 84453762 -168802821 - L1PA3 LINE L1 0 6155 5407 2061 106 65 0 chr2 84454197 84454489 -168802094 + AluSx SINE Alu 1 311 -1 180 322 175 7 chr2 84454517 84454660 -168801923 + L2 LINE L2 2896 3062 -251 477 178 13 45 chr2 84455055 84455212 -168801371 + CT-rich Low_complexity Low_complexity 1 152 0 1630 160 11 0 chr2 84455212 84455480 -168801103 - AluSx SINE Alu 0 312 42 26 0 0 0 chr2 84455909 84455935 -168800648 + AT_rich Low_complexity Low_complexity 1 26 0 372 43 0 0 chr2 84456095 84456141 -168800442 + (CA)n Simple_repeat Simple_repeat 1 46 0 507 288 81 48 chr2 84456324 84456720 -168799863 + L1ME4a LINE L1 5521 5929 -192 25 75 0 0 chr2 84458124 84458177 -168798406 + AT_rich Low_complexity Low_complexity 1 53 0 384 257 76 29 chr2 84458619 84458790 -168797793 - MARNA DNA Mariner -102 484 306 21 0 0 0 chr2 84460352 84460373 -168796210 + AT_rich Low_complexity Low_complexity 1 21 0 1007 214 22 44 chr2 84460624 84460853 -168795730 - Tigger3(Golem) DNA MER2_type -2804 225 2 383 225 0 0 chr2 84461051 84461122 -168795461 - Tigger2 DNA MER2_type -2647 71 1 238 118 53 13 chr2 84461122 84461198 -168795385 + (TA)n Simple_repeat Simple_repeat 2 80 0 27 49 0 0 chr2 84461297 84461338 -168795245 + AT_rich Low_complexity Low_complexity 1 41 0 1417 240 71 87 chr2 84461383 84461607 -168794976 - MER68 LTR ERV1 -7 555 329 21 0 0 0 chr2 84461607 84461628 -168794955 + AT_rich Low_complexity Low_complexity 1 21 0 1417 240 71 87 chr2 84461628 84461945 -168794638 - MER68 LTR ERV1 -233 329 3 2821 229 48 46 chr2 84461959 84462727 -168793856 - HERVL68 LTR ERVL -19 3018 2249 286 283 62 17 chr2 84462896 84463073 -168793510 - L1ME LINE L1 -663 5501 5317 327 296 92 25 chr2 84463078 84463274 -168793309 - L1ME LINE L1 -832 5314 5106 214 375 131 10 chr2 84463533 84463845 -168792738 + L2 LINE L2 2153 2502 -812 5233 72 0 1 chr2 84465805 84466495 -168790088 - L1PA8 LINE L1 -7 6165 5477 2166 103 9 3 chr2 84466498 84466818 -168789765 - L1PA8 LINE L1 -1407 4739 4418 24 32 0 0 chr2 84467457 84467488 -168789095 + AT_rich Low_complexity Low_complexity 1 31 0 1366 222 3 3 chr2 84469173 84469506 -168787077 - L1PA13 LINE L1 -849 5948 5616 8608 227 68 20 chr2 84469608 84471922 -168784661 - L1PA13 LINE L1 -1724 5073 2404 1671 199 3 3 chr2 84471922 84472214 -168784369 + AluSx SINE Alu 1 292 -20 8608 227 68 20 chr2 84472214 84473701 -168782882 - L1PA13 LINE L1 -4393 2404 989 502 203 98 23 chr2 84473718 84473851 -168782732 + MER21B LTR ERV1 613 755 -108 6957 173 27 19 chr2 84474812 84477159 -168779424 + L1PB2 LINE L1 3787 6147 -4 718 212 65 145 chr2 84479077 84479523 -168777060 - MER52A LTR ERV1 -147 894 1 256 173 0 0 chr2 84479726 84479778 -168776805 + L1 LINE L1 4419 4470 -1676 227 208 0 0 chr2 84479861 84479909 -168776674 + L1ME LINE L1 5575 5622 -544 325 266 53 0 chr2 84479911 84480005 -168776578 - L1MEc LINE L1 -2974 4591 4493 503 243 76 49 chr2 84480036 84480221 -168776362 - L1M4 LINE L1 -1208 6357 6168 556 260 114 0 chr2 84480232 84480486 -168776097 - L1MEc LINE L1 -2933 4632 4350 1601 259 73 11 chr2 84480571 84481200 -168775383 - L1MEc LINE L1 -4070 3676 3009 15645 204 25 54 chr2 84481703 84482508 -168774075 + L1PA15-16 LINE L1 1 828 -6021 1952 217 52 0 chr2 84482508 84482913 -168773670 - MSTB LTR MaLR 0 426 1 15645 204 25 54 chr2 84482913 84488226 -168768357 + L1PA15-16 LINE L1 828 5927 -922 1129 191 16 20 chr2 84488331 84488582 -168768001 - L1M4 LINE L1 -3532 4033 3784 19805 174 31 10 chr2 84488711 84492418 -168764165 - L1M4 LINE L1 -3766 3799 14 1239 258 128 30 chr2 84493114 84494356 -168762227 + L1MEc LINE L1 1961 3308 -2907 906 234 54 10 chr2 84494448 84494653 -168761930 - MER20 DNA MER1_type -5 214 1 24 32 0 0 chr2 84494671 84494702 -168761881 + AT_rich Low_complexity Low_complexity 1 31 0 694 321 58 47 chr2 84494843 84495574 -168761009 + L1ME LINE L1 34 772 -5298 1361 77 0 17 chr2 84495674 84495855 -168760728 + AluY SINE Alu 132 309 -2 890 254 5 10 chr2 84495862 84496055 -168760528 - MLT1D LTR MaLR -38 467 276 1742 199 41 107 chr2 84496055 84496854 -168759729 - LTR8A LTR ERV1 0 727 1 493 232 180 21 chr2 84496854 84497089 -168759494 - MLT1D LTR MaLR -332 294 9 241 135 0 0 chr2 84497089 84497126 -168759457 - LTR8A LTR ERV1 -461 266 230 206 309 12 25 chr2 84497740 84497821 -168758762 + MER5A DNA MER1_type 105 184 -5 245 277 85 20 chr2 84498040 84498157 -168758426 + MIR3 SINE MIR 34 164 -44 437 179 0 0 chr2 84498159 84498243 -168758340 + MLT2B1 LTR ERVL 1 84 -436 626 202 42 0 chr2 84498454 84498573 -168758010 + L1MA3 LINE L1 11 134 -7431 * 6077 125 19 61 chr2 84498569 84499717 -168756866 + L1MA3 LINE L1 1823 2922 -4643 11508 184 29 35 chr2 84499717 84503564 -168753019 + L1MA3 LINE L1 3903 7671 -51 580 14 0 0 chr2 84503620 84503690 -168752893 + L1MA3 LINE L1 7648 7717 -7 270 116 0 0 chr2 84504001 84504044 -168752539 + (TG)n Simple_repeat Simple_repeat 1 43 0 241 293 0 0 chr2 84504525 84504583 -168752000 + MER81 DNA DNA 57 114 0 18931 167 96 15 chr2 84505095 84509939 -168746644 - L1M1 LINE L1 -901 6664 1202 189 0 0 0 chr2 84509939 84509960 -168746623 + (CCA)n Simple_repeat Simple_repeat 1 21 0 18931 167 96 15 chr2 84509960 84511253 -168745330 - L1M1 LINE L1 -6363 1202 16 3942 77 169 38 chr2 84511670 84512278 -168744305 + LTR12 LTR ERV1 1 688 0 19512 110 8 6 chr2 84512302 84515212 -168741371 + HERV9 LTR ERV1 58 2972 -5427 1233 113 11 5 chr2 84515211 84515397 -168741186 + HERV9 LTR ERV1 4756 4942 -3457 * 2052 114 36 16 chr2 84515389 84516166 -168740417 + HERV17 LTR ERV1 704 3446 -3203 * 4843 83 6 0 chr2 84516161 84516800 -168739783 + HERV17 LTR ERV1 7757 8399 0 1444 80 226 0 chr2 84516800 84517026 -168739557 + LTR12 LTR ERV1 1 277 -437 290 244 39 0 chr2 84517026 84517104 -168739479 + LTR30 LTR ERV1 544 624 -98 837 117 0 0 chr2 84517104 84517230 -168739353 + LTR12 LTR ERV1 49 587 -127 22 35 0 0 chr2 84517612 84517641 -168738942 + AT_rich Low_complexity Low_complexity 1 29 0 459 280 0 8 chr2 84519105 84519230 -168737353 - LTR16B LTR ERVL 0 464 341 274 377 47 38 chr2 84519278 84519490 -168737093 - LTR16B LTR ERVL -216 248 35 314 295 62 23 chr2 84521039 84521168 -168735415 - MIR SINE MIR -1 261 128 324 294 63 5 chr2 84521193 84521353 -168735230 + MIR SINE MIR 26 262 0 281 288 38 0 chr2 84523733 84523813 -168732770 - MIR SINE MIR -66 142 60 661 255 109 5 chr2 84523837 84524029 -168732554 + MER20 DNA MER1_type 4 215 -4 613 278 22 17 chr2 84524467 84524647 -168731936 - MSTD LTR MaLR 0 396 216 3703 263 33 37 chr2 84524656 84525969 -168730614 - MSTB1-int LTR MaLR -410 1241 2 1516 199 57 62 chr2 84525978 84526401 -168730182 - MSTB1 LTR MaLR -11 421 1 372 352 68 6 chr2 84527639 84527815 -168728768 + MIR3 SINE MIR 7 193 -15 1070 230 70 24 chr2 84527823 84528193 -168728390 - LTR37A LTR ERV1 -18 408 22 631 266 92 56 chr2 84529565 84529991 -168726592 - MER39 LTR ERV1 -1 706 67 497 356 19 5 chr2 84530323 84530528 -168726055 - MIR SINE MIR -54 208 1 450 167 0 33 chr2 84530573 84530663 -168725920 - L1MA7 LINE L1 -282 6009 5923 288 185 0 15 chr2 84530765 84530830 -168725753 - L1MA9 LINE L1 -2 6310 6247 11715 203 53 34 chr2 84530954 84535358 -168721225 - L1MA7 LINE L1 -120 7590 3098 8662 253 27 16 chr2 84535492 84537601 -168718982 - L1MA7 LINE L1 -4626 2860 850 2417 127 11 6 chr2 84540047 84540409 -168716174 - THE1B LTR MaLR 0 364 1 9816 123 46 2 chr2 84540409 84541918 -168714665 - THE1B-int LTR MaLR 0 1580 5 1886 212 36 29 chr2 84541925 84542465 -168714118 - MLT2A2 LTR ERVL -8 546 1 717 312 85 33 chr2 84542713 84543264 -168713319 + L1MCc LINE L1 11 590 -5833 1303 288 68 51 chr2 84543386 84544568 -168712015 + L1MCc LINE L1 824 2248 -4874 1658 153 67 11 chr2 84544568 84544850 -168711733 + AluSx SINE Alu 2 299 -13 1303 288 68 51 chr2 84544850 84545372 -168711211 + L1MCc LINE L1 2248 2759 -4363 437 279 32 13 chr2 84545511 84545665 -168710918 + L1MCc LINE L1 3377 3533 -3408 569 209 37 15 chr2 84548176 84548310 -168708273 - MLT1A1 LTR MaLR 0 365 229 574 272 52 12 chr2 84548555 84548805 -168707778 + L1M4 LINE L1 2249 2508 -3638 7702 215 50 58 chr2 84548955 84550100 -168706483 + L1M1 LINE L1 40 1193 -5567 4606 162 78 5 chr2 84550100 84550941 -168705642 + MER4D LTR ERV1 1 903 0 7702 215 50 58 chr2 84550941 84552876 -168703707 + L1M1 LINE L1 1193 3142 -3618 2464 63 0 3 chr2 84552876 84553176 -168703407 - AluY SINE Alu -12 299 1 7702 215 50 58 chr2 84553176 84553728 -168702855 + L1M1 LINE L1 3142 6017 -743 305 245 108 20 chr2 84554186 84554288 -168702295 + MIR SINE MIR 17 127 -81 186 315 45 45 chr2 84554517 84554606 -168701977 - MIR SINE MIR -131 131 43 3049 188 0 16 chr2 84554667 84555226 -168701357 - MER44D DNA MER2_type 0 605 1 500 129 0 11 chr2 84557944 84558037 -168698546 + (TTCC)n Simple_repeat Simple_repeat 1 92 0 189 423 78 0 chr2 84558060 84558202 -168698381 + L2 LINE L2 3104 3256 -16 498 266 70 0 chr2 84558431 84558559 -168698024 + MER45A DNA AcHobo 34 170 -8 633 288 27 18 chr2 84558988 84559207 -168697376 + MIR SINE MIR 40 260 -2 620 328 131 25 chr2 84559820 84560621 -168695962 - L2 LINE L2 0 3313 2410 2147 118 0 7 chr2 84560673 84560970 -168695613 + AluSx SINE Alu 1 295 -17 231 114 0 0 chr2 84561408 84561443 -168695140 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 32 26 0 0 chr2 84561927 84561966 -168694617 + AT_rich Low_complexity Low_complexity 1 39 0 28 0 0 0 chr2 84562120 84562148 -168694435 + AT_rich Low_complexity Low_complexity 1 28 0 226 156 0 22 chr2 84562399 84562444 -168694139 + MLT1I LTR MaLR 317 360 -49 417 16 48 0 chr2 84563933 84563995 -168692588 + (CA)n Simple_repeat Simple_repeat 2 66 0 1031 163 17 6 chr2 84564291 84564469 -168692114 + MLT1C LTR MaLR 3 182 -285 412 152 40 20 chr2 84564482 84564581 -168692002 - L1MA7 LINE L1 -268 6023 5923 1189 139 0 14 chr2 84564581 84564785 -168691798 + L1MA7 LINE L1 6068 6279 -12 724 249 93 4 chr2 84564839 84565076 -168691507 + MLT1C LTR MaLR 205 462 -5 237 294 42 87 chr2 84565145 84565455 -168691128 - L1MCc LINE L1 -6103 320 25 234 167 83 17 chr2 84565510 84565570 -168691013 - L1MEc LINE L1 -3212 3003 2940 * 254 247 0 0 chr2 84565566 84565643 -168690940 + L1MC4 LINE L1 6627 6703 -1339 234 0 0 0 chr2 84565644 84565670 -168690913 + (TA)n Simple_repeat Simple_repeat 1 26 0 337 305 29 0 chr2 84565733 84565838 -168690745 - L1MEc LINE L1 -3388 2827 2720 * 518 241 129 72 chr2 84565836 84566517 -168690066 - L1MEc LINE L1 -5046 1350 631 366 245 29 4 chr2 84566523 84566675 -168689908 - MER20 DNA MER1_type -7 212 2 209 398 117 28 chr2 84567420 84567669 -168688914 - L2 LINE L2 -354 2960 2690 271 289 0 13 chr2 84567741 84567817 -168688766 - HAL1 LINE L1 -619 1888 1814 1860 282 23 43 chr2 84568384 84568502 -168688081 - L1ME1 LINE L1 -5 6230 6111 2185 132 27 16 chr2 84568502 84568873 -168687710 + THE1C LTR MaLR 1 375 0 1860 282 23 43 chr2 84568873 84569499 -168687084 - L1ME1 LINE L1 -124 6111 5501 1192 86 0 0 chr2 84569518 84569669 -168686914 - AluSg/x SINE Alu -5 307 157 1527 98 0 0 chr2 84569672 84569875 -168686708 - AluY SINE Alu -108 203 1 2533 258 38 38 chr2 84569894 84571228 -168685355 - L1ME1 LINE L1 -2958 3257 1959 2337 183 28 2 chr2 84571228 84571650 -168684933 - Tigger2a DNA MER2_type -1 433 1 2533 258 38 38 chr2 84571650 84572167 -168684416 - L1ME1 LINE L1 -4256 1959 1444 1888 284 53 56 chr2 84572229 84573318 -168683265 - L1ME1 LINE L1 -5222 1174 89 189 0 0 0 chr2 84574198 84574219 -168682364 + (TC)n Simple_repeat Simple_repeat 2 22 0 287 246 71 32 chr2 84574618 84574744 -168681839 + MER94 DNA DNA 1 131 -3 509 92 0 0 chr2 84576144 84576220 -168680363 - L1MA3 LINE L1 -2 6303 6228 51 17 0 0 chr2 84576857 84576915 -168679668 + AT_rich Low_complexity Low_complexity 1 58 0 248 338 47 47 chr2 84576973 84577121 -168679462 - MIR SINE MIR -106 156 9 320 312 110 17 chr2 84577247 84577420 -168679163 + MIR SINE MIR 57 245 -17 354 45 0 0 chr2 84578103 84578147 -168678436 + (TG)n Simple_repeat Simple_repeat 2 45 0 433 279 122 36 chr2 84578160 84578407 -168678176 + MLT1I LTR MaLR 1 268 -141 1445 165 7 29 chr2 84579162 84579434 -168677149 + MER54B LTR ERVL 517 782 -11 3792 103 12 5 chr2 84580102 84580665 -168675918 - L1MA3 LINE L1 -92 6213 5647 2670 122 19 2 chr2 84580666 84581084 -168675499 - MER57B LTR ERV1 0 434 10 2477 143 0 3 chr2 84581088 84581479 -168675104 - L1MA3 LINE L1 -656 5649 5260 206 266 144 70 chr2 84581582 84581811 -168674772 + L2 LINE L2 2283 2528 -786 8064 183 17 3 chr2 84581897 84582283 -168674300 + L1PA14 LINE L1 3578 3957 -2204 2408 83 0 0 chr2 84582283 84582583 -168674000 + AluY SINE Alu 1 300 -11 8064 183 17 3 chr2 84582583 84583791 -168672792 + L1PA14 LINE L1 3957 5156 -1005 198 0 0 0 chr2 84583791 84583813 -168672770 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 8064 183 17 3 chr2 84583813 84584831 -168671752 + L1PA14 LINE L1 5156 6159 -2 22 35 0 0 chr2 84584851 84584880 -168671703 + AT_rich Low_complexity Low_complexity 1 29 0 1712 177 0 17 chr2 84586910 84587209 -168669374 + AluJb SINE Alu 1 294 -18 470 17 17 0 chr2 84587209 84587268 -168669315 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 25 0 0 0 chr2 84587383 84587408 -168669175 + AT_rich Low_complexity Low_complexity 1 25 0 196 305 109 62 chr2 84587831 84587959 -168668624 + MIR SINE MIR 10 143 -119 471 50 25 25 chr2 84588065 84588145 -168668438 + (TTTC)n Simple_repeat Simple_repeat 3 82 0 316 375 70 15 chr2 84588864 84589123 -168667460 - L3 LINE CR1 -866 711 439 327 356 26 0 chr2 84589947 84590062 -168666521 + MIR SINE MIR 49 166 -96 250 277 96 24 chr2 84590856 84590939 -168665644 - MIR SINE MIR -157 105 17 2104 212 30 4 chr2 84591935 84592398 -168664185 - L1MB7 LINE L1 -21 6163 5689 4543 156 6 69 chr2 84592432 84593390 -168663193 - L1MC1 LINE L1 -11 6558 5661 3115 267 125 34 chr2 84593420 84594582 -168662001 - L1MC1 LINE L1 -912 5470 4415 1959 97 0 60 chr2 84594582 84594900 -168661683 - AluY SINE Alu 0 300 1 3115 267 125 34 chr2 84594900 84595859 -168660724 - L1MC1 LINE L1 -1967 4415 3155 5208 108 27 12 chr2 84595886 84596707 -168659876 - L1MA2 LINE L1 0 7723 6891 7107 189 10 11 chr2 84596719 84598223 -168658360 - L1MA2 LINE L1 -1099 6466 4964 * 10985 172 124 21 chr2 84598221 84600459 -168656124 - L1MA2 LINE L1 -4624 2941 474 885 185 37 5 chr2 84600474 84600663 -168655920 - L1MA2 LINE L1 -7357 208 14 1953 257 71 19 chr2 84600664 84601750 -168654833 - L1MC1 LINE L1 -3209 3173 2028 27 29 0 0 chr2 84602648 84602682 -168653901 + AT_rich Low_complexity Low_complexity 1 34 0 204 302 16 48 chr2 84602894 84602957 -168653626 + L2 LINE L2 3201 3261 -11 373 275 50 0 chr2 84603158 84603278 -168653305 - MLT1L LTR MaLR -19 596 471 219 36 0 0 chr2 84604282 84604310 -168652273 + (CA)n Simple_repeat Simple_repeat 2 29 0 251 219 0 126 chr2 84605619 84605738 -168650845 - MLT1H LTR MaLR -16 533 430 25 0 0 0 chr2 84614113 84614138 -168642445 + AT_rich Low_complexity Low_complexity 1 25 0 192 77 0 0 chr2 84614292 84614318 -168642265 + (CA)n Simple_repeat Simple_repeat 1 26 0 254 68 51 17 chr2 84614740 84614799 -168641784 + (TA)n Simple_repeat Simple_repeat 1 61 0 327 130 0 0 chr2 84615908 84615962 -168640621 + (ATG)n Simple_repeat Simple_repeat 3 56 0 225 337 67 0 chr2 84616039 84616128 -168640455 - MIR SINE MIR -93 169 75 2533 44 0 0 chr2 84616633 84616931 -168639652 + AluY SINE Alu 1 298 -13 212 378 14 0 chr2 84617085 84617159 -168639424 - MIR SINE MIR -64 144 70 1141 266 19 25 chr2 84617217 84617540 -168639043 + MLT1A2 LTR MaLR 54 374 0 1184 194 41 106 chr2 84617652 84618039 -168638544 + MLT1A1 LTR MaLR 1 362 -3 204 127 63 13 chr2 84619091 84619170 -168637413 + (TA)n Simple_repeat Simple_repeat 1 83 0 22 70 0 0 chr2 84619763 84619806 -168636777 + AT_rich Low_complexity Low_complexity 1 43 0 226 57 0 0 chr2 84619807 84619842 -168636741 - L1PA4 LINE L1 -5 6150 6116 388 230 9 9 chr2 84619950 84620063 -168636520 + L1MB7 LINE L1 6071 6183 -1 2045 190 43 25 chr2 84620548 84620657 -168635926 + L1MA9 LINE L1 4273 4378 -1768 1250 174 75 0 chr2 84620657 84620939 -168635644 + L1MA4A LINE L1 6000 6302 -1 2045 190 43 25 chr2 84620939 84621314 -168635269 + L1MA9 LINE L1 4378 4766 -1380 4382 180 44 54 chr2 84621321 84621655 -168634928 + L1MA9 LINE L1 5052 5388 -924 450 75 0 0 chr2 84621655 84621722 -168634861 + (TA)n Simple_repeat Simple_repeat 2 68 0 2207 95 0 3 chr2 84621722 84622016 -168634567 - AluY SINE Alu -18 293 1 4382 180 44 54 chr2 84622016 84622935 -168633648 + L1MA9 LINE L1 5386 6298 -14 5287 160 19 59 chr2 84623179 84624236 -168632347 - L1PB3 LINE L1 -1 6869 5892 216 0 0 0 chr2 84624236 84624260 -168632323 + (TTA)n Simple_repeat Simple_repeat 2 25 0 5287 160 19 59 chr2 84624260 84624744 -168631839 - L1PB3 LINE L1 -978 5892 5390 5120 239 32 31 chr2 84624742 84626977 -168629606 - L1PB3 LINE L1 -5219 1644 37 * 24 0 0 0 chr2 84627082 84627106 -168629477 + AT_rich Low_complexity Low_complexity 1 24 0 367 256 86 17 chr2 84627325 84627442 -168629141 - MIR SINE MIR -51 211 87 985 326 37 28 chr2 84627590 84628020 -168628563 + L2 LINE L2 2511 2944 -370 403 296 70 27 chr2 84628065 84628251 -168628332 + L2 LINE L2 3120 3313 0 204 363 69 0 chr2 84631191 84631293 -168625290 + MIR SINE MIR 40 148 -114 183 42 0 0 chr2 84631883 84631907 -168624676 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1102 143 0 0 chr2 84632394 84632562 -168624021 - AluSg/x SINE Alu -16 296 129 244 192 0 19 chr2 84632790 84632842 -168623741 + Charlie7 DNA MER1_type 54 104 -2508 * 355 244 64 26 chr2 84632831 84632987 -168623596 + Charlie7 DNA MER1_type 2440 2601 -11 365 324 105 51 chr2 84633038 84633353 -168623230 + L2 LINE L2 2823 3154 -118 2155 45 0 90 chr2 84633931 84634241 -168622342 + AluY SINE Alu 1 282 -29 27 0 0 0 chr2 84634274 84634301 -168622282 + AT_rich Low_complexity Low_complexity 1 27 0 252 0 0 0 chr2 84634457 84634485 -168622098 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 333 271 5 15 chr2 84635275 84635422 -168621161 + MLT1H LTR MaLR 30 142 -267 25 31 0 0 chr2 84635613 84635645 -168620938 + AT_rich Low_complexity Low_complexity 1 32 0 202 250 0 0 chr2 84635938 84635982 -168620601 + (TA)n Simple_repeat Simple_repeat 1 44 0 2048 158 18 0 chr2 84636135 84636476 -168620107 - MER7A DNA MER2_type -1 345 1 1749 192 12 0 chr2 84636932 84637270 -168619313 - MER2 DNA MER2_type -1 343 2 304 310 58 19 chr2 84638002 84638157 -168618426 - HAL1 LINE L1 -799 1708 1548 3604 170 42 14 chr2 84638275 84639019 -168617564 + LTR1B LTR ERV1 1 785 0 317 293 74 60 chr2 84639253 84639477 -168617106 - MIR SINE MIR -13 249 24 482 359 62 22 chr2 84640152 84640425 -168616158 - MLT1G LTR MaLR -305 285 2 1817 249 92 6 chr2 84641323 84641826 -168614757 - MER90 LTR ERV1 0 614 69 287 290 21 32 chr2 84641852 84641945 -168614638 + MIR SINE MIR 88 179 -83 227 146 0 21 chr2 84642018 84642066 -168614517 + LTR66 LTR ERVL 389 435 -175 227 237 0 0 chr2 84642274 84642333 -168614250 - L1ME3A LINE L1 0 6170 6112 5042 195 25 13 chr2 84642359 84643523 -168613060 + L1MC1 LINE L1 5051 6231 -102 260 173 0 0 chr2 84643542 84643594 -168612989 + L1MC1 LINE L1 6281 6332 -1 22 56 0 0 chr2 84643861 84643897 -168612686 + AT_rich Low_complexity Low_complexity 1 36 0 231 317 115 10 chr2 84644478 84644582 -168612001 + MIR3 SINE MIR 7 121 -87 207 316 147 0 chr2 84644797 84644892 -168611691 - L2 LINE L2 -216 3056 2948 180 152 0 0 chr2 84645313 84645346 -168611237 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 391 156 0 0 chr2 84647238 84647302 -168609281 - L1MA4 LINE L1 -432 5868 5805 2227 157 56 0 chr2 84647302 84647719 -168608864 + L1MA4 LINE L1 5851 6300 0 557 197 0 79 chr2 84647890 84648017 -168608566 + MER20 DNA MER1_type 9 125 -94 207 0 0 0 chr2 84648018 84648041 -168608542 + (CA)n Simple_repeat Simple_repeat 2 24 0 210 71 0 0 chr2 84648542 84648570 -168608013 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 1334 268 63 21 chr2 84648773 84649198 -168607385 + MLT1E LTR MaLR 135 577 -16 453 235 39 26 chr2 84649229 84649382 -168607201 + Charlie1 DNA MER1_type 2552 2706 -55 180 0 0 0 chr2 84649382 84649402 -168607181 + (TA)n Simple_repeat Simple_repeat 2 21 0 278 294 206 16 chr2 84649458 84649584 -168606999 + MIR SINE MIR 6 155 -107 1937 147 19 0 chr2 84649630 84649937 -168606646 + AluSq SINE Alu 1 313 0 298 358 119 7 chr2 84650002 84650153 -168606430 - MIR SINE MIR -20 242 75 385 253 167 23 chr2 84650366 84650540 -168606043 + L2 LINE L2 3113 3311 -2 347 278 96 21 chr2 84650841 84651028 -168605555 - L2 LINE L2 0 3313 3113 295 180 0 0 chr2 84651080 84651130 -168605453 - L2 LINE L2 -321 2992 2943 684 244 56 0 chr2 84651771 84651931 -168604652 - FRAM SINE Alu -7 169 1 495 320 103 15 chr2 84652104 84652307 -168604276 - L3 LINE CR1 -15 1562 1342 230 396 21 0 chr2 84652367 84652463 -168604120 + MIR SINE MIR 34 131 -77 338 67 0 0 chr2 84652634 84652679 -168603904 - MADE1 DNA Mariner -5 75 31 213 178 0 0 chr2 84655575 84655620 -168600963 + (CATATA)n Simple_repeat Simple_repeat 1 45 0 531 258 8 8 chr2 84655980 84656104 -168600479 - MER5B DNA MER1_type 0 178 55 268 220 28 187 chr2 84656387 84656569 -168600014 + MER5B DNA MER1_type 8 160 -18 329 295 162 0 chr2 84656575 84656680 -168599903 - MER5B DNA MER1_type -56 122 1 27 29 0 0 chr2 84656730 84656764 -168599819 + AT_rich Low_complexity Low_complexity 1 34 0 1918 79 60 11 chr2 84656772 84657072 -168599511 + AluY SINE Alu 1 313 0 299 277 94 25 chr2 84657109 84657235 -168599348 + MER5A DNA MER1_type 4 141 -48 922 197 52 38 chr2 84657270 84657483 -168599100 + MER20 DNA MER1_type 1 216 -3 848 238 11 11 chr2 84657494 84657683 -168598900 - MER5A DNA MER1_type 0 189 1 359 214 14 0 chr2 84660956 84661026 -168595557 - L2 LINE L2 0 3313 3243 1612 271 101 24 chr2 84662296 84662850 -168593733 + MER77 LTR ERV1 9 605 0 726 309 72 26 chr2 84663303 84663649 -168592934 + LTR33 LTR ERVL 10 371 -150 186 189 0 0 chr2 84663760 84663797 -168592786 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 499 288 94 12 chr2 84664298 84664468 -168592115 - LTR33 LTR ERVL -305 216 33 2372 73 0 3 chr2 84666615 84666917 -168589666 + AluY SINE Alu 1 301 -10 300 291 139 13 chr2 84667828 84667986 -168588597 + MIR SINE MIR 28 205 -57 318 214 112 10 chr2 84669201 84669299 -168587284 - MLT1I LTR MaLR -28 381 274 1113 283 97 27 chr2 84669665 84669944 -168586639 + L1M3a LINE L1 11 269 -5686 2437 126 0 3 chr2 84669944 84670300 -168586283 + THE1A LTR MaLR 1 355 0 11155 109 2 8 chr2 84670300 84671889 -168584694 + THE1A-int LTR MaLR 1 1580 0 2595 83 14 3 chr2 84671890 84672240 -168584343 + THE1A LTR MaLR 2 355 0 1113 283 97 27 chr2 84672240 84672473 -168584110 + L1M3a LINE L1 268 740 -5215 518 189 0 11 chr2 84672564 84672654 -168583929 + Tigger1 DNA MER2_type 2327 2415 -3 473 94 0 82 chr2 84672693 84672778 -168583805 - Tigger1 DNA MER2_type -99 2319 2242 10826 161 56 7 chr2 84672837 84674780 -168581803 - Tigger1 DNA MER2_type -381 2037 1 1048 126 13 0 chr2 84674938 84675097 -168581486 - L1PA16 LINE L1 -213 5953 5793 298 182 18 0 chr2 84675345 84675400 -168581183 - MER5A DNA MER1_type 0 189 134 30303 107 15 53 chr2 84675408 84677986 -168578597 + L1PA7 LINE L1 3 2676 -3478 2377 64 7 0 chr2 84677986 84678281 -168578302 - AluY SINE Alu -14 297 1 30303 107 15 53 chr2 84678281 84681500 -168575083 + L1PA7 LINE L1 2676 6153 -1 472 267 44 7 chr2 84681500 84681635 -168574948 - MER5A DNA MER1_type -49 140 1 600 120 126 51 chr2 84682204 84682379 -168574204 + MER53 DNA DNA 1 188 -1 286 260 27 0 chr2 84682485 84682558 -168574025 + MIR SINE MIR 78 152 -110 26 88 0 0 chr2 84685265 84685333 -168571250 + AT_rich Low_complexity Low_complexity 1 68 0 772 288 154 16 chr2 84685334 84685963 -168570620 - L1MEc LINE L1 -5105 1291 576 302 331 40 17 chr2 84685994 84686169 -168570414 - L1MEc LINE L1 -5908 488 310 260 327 61 0 chr2 84686483 84686648 -168569935 + L1M4 LINE L1 3791 3965 -2181 243 189 0 0 chr2 84687159 84687212 -168569371 - L1MB7 LINE L1 -20 6164 6112 2429 208 85 39 chr2 84687212 84687772 -168568811 - L1MB5 LINE L1 -155 6088 5477 1726 149 79 25 chr2 84687772 84688128 -168568455 + THE1C LTR MaLR 1 375 0 2429 208 85 39 chr2 84688128 84688251 -168568332 - L1MB5 LINE L1 -766 5477 5361 329 164 0 0 chr2 84688267 84688322 -168568261 + L1MC/D LINE L1 5700 5754 -605 22 0 0 0 chr2 84688328 84688350 -168568233 + AT_rich Low_complexity Low_complexity 1 22 0 4696 143 14 29 chr2 84688350 84689206 -168567377 - L1MA1 LINE L1 0 6302 5460 3603 248 68 32 chr2 84689292 84690720 -168565863 - L1MB5 LINE L1 -1551 4664 3186 956 259 42 16 chr2 84690825 84691203 -168565380 - L1MB5 LINE L1 -3699 2520 2172 1315 48 0 6 chr2 84691204 84691370 -168565213 - L1PA3 LINE L1 -3 6152 5988 2960 20 0 0 chr2 84691370 84691916 -168564667 + L1P1 LINE L1 5037 5582 -573 1932 100 0 0 chr2 84691914 84692195 -168564388 - L1P LINE L1 -1090 5056 4776 * 5869 96 0 6 chr2 84692195 84693023 -168563560 + L1PA8 LINE L1 5341 6165 -7 189 147 0 0 chr2 84693979 84694013 -168562570 + (TC)n Simple_repeat Simple_repeat 1 34 0 2389 88 10 0 chr2 84694246 84694553 -168562030 + AluY SINE Alu 2 311 0 535 328 61 30 chr2 84695876 84696303 -168560280 + L1M4 LINE L1 2145 2584 -3562 434 347 36 0 chr2 84696748 84697022 -168559561 - L1 LINE L1 -1797 4349 4066 1055 238 91 69 chr2 84697024 84697444 -168559139 + L1MC4 LINE L1 6568 6996 -1046 255 185 56 0 chr2 84697499 84697553 -168559030 + MSTA LTR MaLR 1 57 -371 1212 215 40 16 chr2 84697558 84697952 -168558631 - L1ME LINE L1 -599 5567 5165 971 230 5 14 chr2 84697957 84698174 -168558409 + AluJo SINE Alu 1 215 -97 296 216 167 10 chr2 84698731 84698833 -168557750 + MIR SINE MIR 128 245 -17 287 341 40 0 chr2 84699586 84699712 -168556871 - MIR SINE MIR -51 211 81 2182 99 6 10 chr2 84699917 84700230 -168556353 - AluSq SINE Alu 0 313 2 230 277 0 0 chr2 84701334 84701381 -168555202 + MLT1J2 LTR MaLR 115 161 -289 290 295 37 20 chr2 84701388 84701536 -168555047 + MLT1I LTR MaLR 296 407 -2 565 92 23 23 chr2 84701756 84701887 -168554696 + (TAGA)n Simple_repeat Simple_repeat 4 134 0 1611 204 54 3 chr2 84701918 84702231 -168554352 - MER47B DNA MER2_type -1 417 89 1393 192 8 8 chr2 84702277 84702543 -168554040 + AluJb SINE Alu 17 282 -30 577 170 0 10 chr2 84702551 84702651 -168553932 - MER47B DNA MER2_type -319 99 1 220 143 24 60 chr2 84702651 84702735 -168553848 + (TA)n Simple_repeat Simple_repeat 2 82 0 202 292 0 56 chr2 84703877 84703949 -168552634 + MER5B DNA MER1_type 82 149 -29 350 294 89 6 chr2 84704535 84704715 -168551868 + L1ME3A LINE L1 5964 6158 -12 1308 281 70 5 chr2 84705219 84705593 -168550990 + LTR16A LTR ERVL 18 415 -35 23 33 0 0 chr2 84706392 84706422 -168550161 + AT_rich Low_complexity Low_complexity 1 30 0 357 368 152 34 chr2 84706633 84707244 -168549339 - L2 LINE L2 -2442 872 190 283 266 50 58 chr2 84707614 84707855 -168548728 - L1MEc LINE L1 -4120 2276 2038 347 346 145 34 chr2 84708017 84708540 -168548043 - L1MEc LINE L1 -4583 1813 1233 218 375 49 45 chr2 84709125 84709389 -168547194 + L2 LINE L2 2439 2703 -611 1077 212 40 62 chr2 84709970 84710342 -168546241 + L1MB8 LINE L1 5800 6163 -15 29 0 0 0 chr2 84710353 84710382 -168546201 + AT_rich Low_complexity Low_complexity 1 29 0 321 240 21 0 chr2 84710382 84710495 -168546088 + L1M4 LINE L1 3670 3784 -2362 290 250 43 0 chr2 84710479 84710571 -168546012 + L1M4 LINE L1 4226 4321 -1825 * 3515 275 32 10 chr2 84710571 84711763 -168544820 + L1M4 LINE L1 3786 5003 -1143 218 255 0 0 chr2 84711908 84711955 -168544628 + CT-rich Low_complexity Low_complexity 3 49 0 221 300 22 30 chr2 84712001 84712169 -168544414 + CT-rich Low_complexity Low_complexity 1 166 0 385 271 138 8 chr2 84712734 84713110 -168543473 + L1M4 LINE L1 2752 3176 -2970 264 30 0 0 chr2 84713397 84713430 -168543153 + (CA)n Simple_repeat Simple_repeat 1 33 0 1078 276 112 3 chr2 84713508 84714125 -168542458 + L1M4 LINE L1 3794 4477 -1669 1500 56 0 0 chr2 84714316 84714654 -168541929 + (G)n Simple_repeat Simple_repeat 1 338 0 6945 29 1 1 chr2 84716605 84717941 -168538642 + L1PA2 LINE L1 4718 6053 -102 1619 90 1 4 chr2 84717939 84718275 -168538308 - L1P4 LINE L1 -672 5489 5154 * 772 152 65 0 chr2 84718543 84718681 -168537902 - MER68 LTR ERV1 -415 147 1 334 343 56 46 chr2 84718906 84719320 -168537263 - L1MEd LINE L1 -5584 535 118 480 136 0 27 chr2 84719668 84719778 -168536805 + (GGGA)n Simple_repeat Simple_repeat 2 108 0 308 295 31 54 chr2 84720226 84720450 -168536133 - L1MC4 LINE L1 -369 7673 7455 217 300 151 15 chr2 84720963 84721106 -168535477 - MIR SINE MIR 0 208 32 194 322 0 0 chr2 84721895 84721954 -168534629 + MIR SINE MIR 64 122 -140 324 360 117 14 chr2 84722604 84722826 -168533757 - MIR SINE MIR 0 262 18 243 325 25 25 chr2 84723116 84723196 -168533387 - MIR SINE MIR -106 102 23 4870 161 37 22 chr2 84724656 84725680 -168530903 + L1M4c LINE L1 755 1793 -4591 * 8839 115 10 1 chr2 84725678 84727117 -168529466 + L1P3 LINE L1 4059 5507 -665 12712 181 28 8 chr2 84727222 84729762 -168526821 + L1P LINE L1 2377 4968 -1178 792 164 34 68 chr2 84729868 84730045 -168526538 - Tigger2a DNA MER2_type -263 171 1 1021 193 6 0 chr2 84730045 84730226 -168526357 + L1MB1 LINE L1 5905 6086 -82 1955 129 4 0 chr2 84730293 84730601 -168525982 - AluSc SINE Alu 0 309 1 324 182 0 0 chr2 84730624 84730690 -168525893 + L1MB1 LINE L1 6096 6161 -28 271 339 71 0 chr2 84732390 84732502 -168524081 + MIR SINE MIR 44 163 -45 1753 219 11 29 chr2 84733001 84733322 -168523261 - L1PA13 LINE L1 -4816 1971 1658 1870 142 11 7 chr2 84733322 84733624 -168522959 - AluSx SINE Alu 0 303 1 1753 219 11 29 chr2 84733624 84733748 -168522835 - L1PA13 LINE L1 -5129 1658 1533 196 191 16 63 chr2 84734535 84734598 -168521985 + GA-rich Low_complexity Low_complexity 4 63 0 180 0 0 0 chr2 84734620 84734640 -168521943 + (GGAA)n Simple_repeat Simple_repeat 1 20 0 792 222 132 15 chr2 84734652 84734986 -168521597 + L1MC5 LINE L1 7321 7693 -268 859 201 76 54 chr2 84735293 84735733 -168520850 - MER34 LTR ERV1 -12 530 31 243 138 43 26 chr2 84736598 84736714 -168519869 + G-rich Low_complexity Low_complexity 3 120 0 195 114 0 0 chr2 84736747 84736782 -168519801 + (G)n Simple_repeat Simple_repeat 1 35 0 390 298 120 26 chr2 84737135 84737154 -168519429 - MIR SINE MIR -6 256 240 1933 177 3 20 chr2 84737154 84737504 -168519079 + MER2 DNA MER2_type 1 344 0 390 298 120 26 chr2 84737504 84737675 -168518908 - MIR SINE MIR -22 240 48 246 323 0 78 chr2 84738421 84738588 -168517995 - L2 LINE L2 0 3313 3160 2803 208 83 18 chr2 84738787 84739143 -168517440 + L1M1 LINE L1 2854 3185 -4380 2042 123 0 23 chr2 84739143 84739489 -168517094 - AluSc SINE Alu 0 309 3 2803 208 83 18 chr2 84739489 84740407 -168516176 + L1M1 LINE L1 3185 4225 -3340 1628 177 0 20 chr2 84740669 84740968 -168515615 + AluJb SINE Alu 1 293 -19 23 0 0 0 chr2 84742305 84742328 -168514255 + AT_rich Low_complexity Low_complexity 1 23 0 305 230 26 62 chr2 84742339 84742452 -168514131 + MER112 DNA MER1_type 147 255 -5 553 211 78 0 chr2 84742850 84742978 -168513605 - MIR SINE MIR -34 228 91 29 60 0 0 chr2 84743413 84743463 -168513120 + AT_rich Low_complexity Low_complexity 1 50 0 216 263 0 35 chr2 84743870 84743927 -168512656 + (ATGGTG)n Simple_repeat Simple_repeat 6 60 0 21 57 0 0 chr2 84744669 84744704 -168511879 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr2 84745183 84745207 -168511376 + AT_rich Low_complexity Low_complexity 1 24 0 456 258 54 66 chr2 84745969 84746136 -168510447 + MER5B DNA MER1_type 10 174 -4 3453 175 47 4 chr2 84746523 84747209 -168509374 - L1MC1 LINE L1 -1 6332 5618 30 0 0 0 chr2 84747612 84747642 -168508941 + AT_rich Low_complexity Low_complexity 1 30 0 2967 190 51 44 chr2 84749465 84750107 -168506476 + L1M4c LINE L1 5 651 -5733 765 286 157 18 chr2 84751402 84751787 -168504796 - MLT1E LTR MaLR -58 535 97 2095 133 0 6 chr2 84751787 84752117 -168504466 - MER6 DNA MER2_type 0 865 538 1197 253 41 30 chr2 84752118 84752557 -168504026 - L1P LINE L1 -3018 3128 2685 2598 225 30 12 chr2 84753069 84753629 -168502954 + L1PA12 LINE L1 1 570 -7011 1778 215 3 8 chr2 84753604 84753986 -168502597 + L1PA12 LINE L1 3452 3831 -3753 * 210 143 0 0 chr2 84754424 84754459 -168502124 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 194 267 0 22 chr2 84754670 84754715 -168501868 + L3 LINE CR1 1524 1567 -10 1332 248 41 30 chr2 84755716 84756083 -168500500 - MLT1E2 LTR MaLR -30 596 226 891 282 57 66 chr2 84756117 84756739 -168499844 - MLT1E3 LTR MaLR -1 623 1 318 271 116 8 chr2 84756791 84756920 -168499663 - MLT1E2 LTR MaLR -503 151 9 694 212 30 0 chr2 84757403 84757535 -168499048 + MLT1E LTR MaLR 26 161 -432 4175 68 2 4 chr2 84757551 84758091 -168498492 + LTR14C LTR ERVK 1 539 -48 754 75 9 0 chr2 84758084 84758190 -168498393 + LTR14C LTR ERVK 481 587 0 * 1201 281 62 16 chr2 84758205 84758590 -168497993 + MLT1E LTR MaLR 191 593 0 26 0 0 0 chr2 84758803 84758829 -168497754 + AT_rich Low_complexity Low_complexity 1 26 0 237 235 12 12 chr2 84758933 84759018 -168497565 + (TGG)n Simple_repeat Simple_repeat 2 86 0 183 125 31 31 chr2 84759052 84759116 -168497467 + (GGGTG)n Simple_repeat Simple_repeat 5 68 0 2658 210 67 21 chr2 84759221 84759899 -168496684 - L1M3 LINE L1 -376 5807 5162 234 91 0 0 chr2 84759899 84759932 -168496651 + (TTG)n Simple_repeat Simple_repeat 1 33 0 2658 210 67 21 chr2 84759932 84760497 -168496086 - L1M3 LINE L1 -1021 5162 4496 761 107 25 25 chr2 84760513 84760634 -168495949 + AluSc SINE Alu 1 121 -188 7130 238 22 21 chr2 84760885 84762845 -168493738 - L1P LINE L1 -923 5223 3262 637 255 14 35 chr2 84764092 84764388 -168492195 + MER21-int LTR ERV1 3038 3363 -828 2218 147 25 0 chr2 84765163 84765518 -168491065 - THE1B LTR MaLR 0 364 1 214 333 54 54 chr2 84765903 84766050 -168490533 - MER5B DNA MER1_type -6 172 26 289 220 60 100 chr2 84766301 84766451 -168490132 - MER104 DNA Tc2 -33 147 4 24 0 0 0 chr2 84766913 84766937 -168489646 + AT_rich Low_complexity Low_complexity 1 24 0 2688 288 96 44 chr2 84767035 84768214 -168488369 + L1 LINE L1 6 1245 -4896 7205 220 91 12 chr2 84768318 84770363 -168486220 + L1 LINE L1 2879 5085 -1125 650 141 12 98 chr2 84770367 84770530 -168486053 + L1MB1 LINE L1 6015 6163 -5 737 167 83 0 chr2 84770534 84770714 -168485869 - AluSg/x SINE Alu 0 320 129 1588 141 43 1 chr2 84770830 84771161 -168485422 - Tigger4(Zombi) DNA MER2_type 0 2731 1 2278 239 33 51 chr2 84771226 84771929 -168484654 + MER21-int LTR ERV1 3442 4131 -60 5217 225 26 23 chr2 84772478 84773780 -168482803 - L1MC3 LINE L1 -691 7094 5789 2086 206 20 2 chr2 84773881 84774322 -168482261 + L1PA16 LINE L1 5702 6150 -16 257 289 99 42 chr2 84774741 84774883 -168481700 + L3 LINE CR1 697 846 -731 5059 161 6 6 chr2 84775200 84776479 -168480104 + L1PA15 LINE L1 4878 6152 -13 1105 179 9 5 chr2 84776483 84776701 -168479882 + L1 LINE L1 3774 3992 -2154 2260 93 3 0 chr2 84776701 84776990 -168479593 + AluSp SINE Alu 1 290 -23 3331 182 39 25 chr2 84777205 84777959 -168478624 + L1 LINE L1 4376 5139 -1007 2270 69 13 7 chr2 84778754 84779057 -168477526 - AluY SINE Alu -6 305 1 185 363 69 44 chr2 84779152 84779312 -168477271 + MIR3 SINE MIR 20 183 -25 618 292 50 29 chr2 84779944 84780328 -168476255 - L1MC4 LINE L1 -150 7892 7501 402 304 52 0 chr2 84780514 84780629 -168475954 - MER63 DNA MER1_type -304 758 12 2021 181 14 3 chr2 84780892 84781257 -168475326 + L1PA16 LINE L1 5773 6141 -25 1890 168 43 9 chr2 84781375 84781703 -168474880 + MER21A LTR ERV1 593 931 0 295 244 13 13 chr2 84781714 84781792 -168474791 + L1M4 LINE L1 4488 4565 -1581 * 7033 172 32 3 chr2 84781790 84783012 -168473571 + L1PA15-16 LINE L1 866 2122 -4727 1159 243 61 13 chr2 84783171 84783484 -168473099 - MLT1D LTR MaLR -177 328 1 577 245 33 117 chr2 84783491 84783919 -168472664 + L1MB4 LINE L1 2277 2668 -3478 769 271 110 51 chr2 84783975 84784766 -168471817 + L1MB4 LINE L1 2981 3818 -2328 270 198 85 28 chr2 84784736 84784842 -168471741 + L1MB4 LINE L1 5388 5499 -663 * 1740 119 4 0 chr2 84784957 84785193 -168471390 + AluSg SINE Alu 1 237 -73 7056 188 89 55 chr2 84785295 84787289 -168469294 + L1MCa LINE L1 264 2325 -4101 804 233 20 25 chr2 84787304 84787549 -168469034 + L1MCa LINE L1 2862 3105 -3321 4071 256 51 44 chr2 84787851 84788474 -168468109 + L1M4c LINE L1 1187 1804 -4578 2014 125 3 7 chr2 84788474 84788777 -168467806 - AluSq SINE Alu -11 302 1 4071 256 51 44 chr2 84788777 84791054 -168465529 + L1M4c LINE L1 1804 4234 -2148 1010 209 53 25 chr2 84791085 84791329 -168465254 - MLT1B LTR MaLR -123 267 17 225 200 0 0 chr2 84791615 84791660 -168464923 + L1MB4 LINE L1 5800 5844 -330 1463 187 72 3 chr2 84791678 84792010 -168464573 + L1MB4 LINE L1 5826 6180 0 323 314 105 0 chr2 84792087 84792240 -168464343 - MIR3 SINE MIR -1 207 39 497 154 122 16 chr2 84792676 84792799 -168463784 - MER85 DNA T2_type -2 137 2 549 286 58 6 chr2 84793980 84794151 -168462432 + MIR SINE MIR 83 262 0 2852 15 3 0 chr2 84794497 84794830 -168461753 + L1PA2 LINE L1 5820 6153 -2 1997 223 12 52 chr2 84794858 84795064 -168461519 + L1M4c LINE L1 4209 4422 -1960 1978 122 3 3 chr2 84795064 84795358 -168461225 + AluSx SINE Alu 4 297 -15 1997 223 12 52 chr2 84795358 84795724 -168460859 + L1M4c LINE L1 4422 4758 -1624 2374 267 82 27 chr2 84796080 84798076 -168458507 + L1M4c LINE L1 977 3098 -3284 454 248 17 0 chr2 84798538 84798655 -168457928 - MER103 DNA DNA -46 120 2 4173 127 34 10 chr2 84798843 84799518 -168457065 + L1PA11 LINE L1 5476 6166 -8 30 45 0 0 chr2 84799524 84799568 -168457015 + AT_rich Low_complexity Low_complexity 1 44 0 21 0 0 0 chr2 84800108 84800129 -168456454 + AT_rich Low_complexity Low_complexity 1 21 0 235 299 65 13 chr2 84800275 84800352 -168456231 - MIR3 SINE MIR -43 165 85 27 29 0 0 chr2 84800502 84800536 -168456047 + AT_rich Low_complexity Low_complexity 1 34 0 28541 62 3 1 chr2 84802207 84806675 -168449908 - L1PA6 LINE L1 -1 6153 1678 852 208 0 6 chr2 84806951 84807110 -168449473 - AluJo/FRAM SINE Alu -21 291 134 2562 41 0 16 chr2 84807110 84807425 -168449158 - AluY SINE Alu -1 310 1 215 280 47 65 chr2 84807528 84807635 -168448948 + L2 LINE L2 3153 3257 -15 196 360 103 6 chr2 84807814 84807989 -168448594 + MIR SINE MIR 53 244 -18 2084 123 47 33 chr2 84808146 84808505 -168448078 - THE1B LTR MaLR 0 364 1 258 264 0 0 chr2 84808796 84808849 -168447734 + polypyrimidine Low_complexity Low_complexity 28 80 0 365 233 135 0 chr2 84810183 84810316 -168446267 - HAL1b LINE L1 -252 1096 946 285 282 91 0 chr2 84810332 84810442 -168446141 - L1MC3 LINE L1 -1086 6699 6580 1541 229 21 26 chr2 84810449 84810511 -168446072 - L1MC3 LINE L1 -1159 6626 6565 198 0 0 0 chr2 84810511 84810533 -168446050 + (TA)n Simple_repeat Simple_repeat 1 22 0 480 18 0 0 chr2 84810537 84810594 -168445989 + (CA)n Simple_repeat Simple_repeat 2 58 0 1541 229 21 26 chr2 84810594 84810945 -168445638 - L1MC3 LINE L1 -1223 6562 6210 1030 235 125 55 chr2 84811366 84811748 -168444835 + MSTD LTR MaLR 3 396 0 289 139 54 54 chr2 84812367 84812533 -168444050 + (TA)n Simple_repeat Simple_repeat 1 166 0 21 0 0 0 chr2 84812558 84812579 -168444004 + AT_rich Low_complexity Low_complexity 1 21 0 252 59 0 0 chr2 84813223 84813257 -168443326 + (TA)n Simple_repeat Simple_repeat 2 35 0 346 261 0 22 chr2 84813259 84813351 -168443232 + L1MC4 LINE L1 6614 6703 -1339 312 294 29 0 chr2 84813278 84813380 -168443203 - L1MC4 LINE L1 -1323 6719 6615 * 30 0 0 0 chr2 84814772 84814802 -168441781 + AT_rich Low_complexity Low_complexity 1 30 0 533 295 76 20 chr2 84814834 84815085 -168441498 - L2 LINE L2 0 3313 3049 316 312 80 51 chr2 84815259 84815496 -168441087 - MIR SINE MIR -7 255 12 1584 229 121 50 chr2 84815506 84816183 -168440400 + MER50 LTR ERV1 10 734 0 42 65 0 0 chr2 84816233 84816310 -168440273 + AT_rich Low_complexity Low_complexity 1 77 0 1605 263 142 2 chr2 84816322 84816759 -168439824 + MLT1D LTR MaLR 1 498 -7 1180 267 49 30 chr2 84816779 84817251 -168439332 + MLT1D-int LTR MaLR 16 496 -875 1093 220 88 0 chr2 84817269 84817564 -168439019 + MER46B DNA MER2_type 32 227 -9 475 186 0 150 chr2 84817571 84817738 -168438845 + MLT1D-int LTR MaLR 495 636 -735 22 0 0 0 chr2 84818100 84818122 -168438461 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr2 84818926 84818955 -168437628 + AT_rich Low_complexity Low_complexity 1 29 0 2100 179 33 16 chr2 84819469 84819894 -168436689 + Tigger2a DNA MER2_type 2 433 -1 25 0 0 0 chr2 84820376 84820401 -168436182 + AT_rich Low_complexity Low_complexity 1 25 0 4375 287 59 39 chr2 84820501 84822951 -168433632 + L1MEc LINE L1 38 2495 -3720 285 186 0 0 chr2 84823115 84823185 -168433398 + CT-rich Low_complexity Low_complexity 2 71 0 270 0 0 0 chr2 84823192 84823222 -168433361 + (TA)n Simple_repeat Simple_repeat 1 30 0 434 230 96 6 chr2 84823519 84823697 -168432886 + L1MEc LINE L1 2503 2696 -3519 1168 240 90 18 chr2 84823698 84824441 -168432142 + L1MEc LINE L1 2806 3638 -2577 528 289 62 9 chr2 84825144 84825355 -168431228 + MIR SINE MIR 41 262 0 2463 64 3 3 chr2 84825483 84825794 -168430789 + AluY SINE Alu 1 311 0 2129 116 3 0 chr2 84826380 84826695 -168429888 + AluSg1 SINE Alu 1 309 0 4375 161 10 3 chr2 84826717 84827423 -168429160 + MER50 LTR ERV1 1 711 -23 462 297 154 21 chr2 84827426 84827756 -168428827 + L1MEc LINE L1 237 610 -5953 226 235 72 52 chr2 84828012 84828165 -168428418 + L1MEc LINE L1 1035 1190 -5373 6263 137 11 4 chr2 84828231 84829717 -168426866 + HUERS-P3b LTR ERV1 5210 6755 -2164 1371 267 86 27 chr2 84829722 84830450 -168426133 + HUERS-P3b LTR ERV1 6655 7408 -10 303 203 16 0 chr2 84830455 84830519 -168426064 + LTR19C LTR ERV1 1 65 -714 803 206 110 44 chr2 84830550 84830822 -168425761 + LTR19C LTR ERV1 490 779 0 318 264 75 48 chr2 84830823 84831030 -168425553 + L1MEc LINE L1 1107 1321 -5063 182 374 82 0 chr2 84831104 84831251 -168425332 - L2 LINE L2 -1318 1996 1838 22 80 0 0 chr2 84831260 84831310 -168425273 + AT_rich Low_complexity Low_complexity 1 50 0 3113 176 58 26 chr2 84831388 84832092 -168424491 + LTR8A LTR ERV1 1 727 0 320 278 20 60 chr2 84832225 84832274 -168424309 - L1ME3A LINE L1 -223 5930 5881 354 23 0 0 chr2 84832274 84832317 -168424266 + (TG)n Simple_repeat Simple_repeat 2 44 0 1993 131 3 3 chr2 84832322 84832612 -168423971 - AluSx SINE Alu -22 290 1 320 278 20 60 chr2 84832612 84832707 -168423876 - L1ME3A LINE L1 -276 5877 5786 320 283 55 32 chr2 84832828 84833006 -168423577 - L1ME3A LINE L1 -536 5617 5445 2239 151 28 5 chr2 84833006 84833396 -168423187 - MER57A LTR ERV1 -3 400 2 320 283 55 32 chr2 84833396 84833583 -168423000 - L1ME3A LINE L1 -708 5445 5240 26 64 0 0 chr2 84833583 84833630 -168422953 + AT_rich Low_complexity Low_complexity 1 47 0 308 263 153 63 chr2 84833642 84833868 -168422715 - L1ME3A LINE L1 -935 5194 4933 2497 169 120 6 chr2 84833868 84834402 -168422181 - LTR49 LTR ERV1 0 595 1 308 263 153 63 chr2 84834402 84834476 -168422107 - L1ME3A LINE L1 -1196 4933 4867 381 331 133 17 chr2 84834579 84834984 -168421599 - L1ME3A LINE L1 -5547 572 121 189 147 0 0 chr2 84835002 84835036 -168421547 + (CAAAA)n Simple_repeat Simple_repeat 3 36 0 247 272 0 68 chr2 84835748 84835851 -168420732 + GA-rich Low_complexity Low_complexity 3 98 0 2912 160 81 89 chr2 84836272 84837024 -168419559 + LTR48 LTR ERV1 1 746 -41 3740 184 34 10 chr2 84837239 84837949 -168418634 + MER50 LTR ERV1 1 727 -7 2116 86 90 8 chr2 84837955 84838322 -168418261 - LTR7 LTR ERV1 0 450 1 3389 152 70 2 chr2 84839047 84839620 -168416963 + LTR9 LTR ERV1 1 612 0 2150 90 0 7 chr2 84839637 84839950 -168416633 + AluY SINE Alu 1 311 0 2010 119 6 13 chr2 84839994 84840306 -168416277 - AluSg SINE Alu 0 310 1 200 128 26 0 chr2 84840567 84840606 -168415977 + (TA)n Simple_repeat Simple_repeat 1 40 0 625 172 39 23 chr2 84841049 84841177 -168415406 - FLAM_C SINE Alu -13 130 1 210 91 0 0 chr2 84841196 84841229 -168415354 + (TTG)n Simple_repeat Simple_repeat 2 34 0 21 0 0 0 chr2 84841839 84841860 -168414723 + AT_rich Low_complexity Low_complexity 1 21 0 212 324 65 19 chr2 84841977 84842085 -168414498 - MIR SINE MIR 0 262 150 22 25 0 25 chr2 84842710 84842730 -168413853 + AT_rich Low_complexity Low_complexity 1 20 -19 2098 116 3 3 chr2 84842730 84843022 -168413561 + AluSx SINE Alu 1 292 -20 22 25 0 25 chr2 84843022 84843041 -168413542 + AT_rich Low_complexity Low_complexity 20 39 0 272 338 86 14 chr2 84843080 84843219 -168413364 - MIR SINE MIR -16 246 98 402 350 89 12 chr2 84844038 84844295 -168412288 - L2 LINE L2 -493 2821 2545 652 247 6 6 chr2 84846349 84846507 -168410076 - L1MC3 LINE L1 -933 6852 6695 1097 277 71 7 chr2 84846539 84846976 -168409607 - L1MC3 LINE L1 -1475 6310 5846 238 257 43 0 chr2 84846976 84847046 -168409537 + L1MC5 LINE L1 6759 6831 -1130 22 0 0 0 chr2 84847126 84847148 -168409435 + AT_rich Low_complexity Low_complexity 1 22 0 1546 171 16 48 chr2 84848375 84848684 -168407899 + AluJo SINE Alu 1 299 -13 1317 184 4 54 chr2 84849021 84849179 -168407404 - AluJo SINE Alu -21 291 151 2702 29 0 13 chr2 84849179 84849494 -168407089 - AluY SINE Alu 0 311 1 1317 184 4 54 chr2 84849494 84849612 -168406971 - AluJo SINE Alu -161 151 29 22 80 0 0 chr2 84850085 84850135 -168406448 + AT_rich Low_complexity Low_complexity 1 50 0 290 335 76 45 chr2 84850243 84850533 -168406050 + L1ME LINE L1 5360 5661 -460 23 54 0 0 chr2 84850676 84850713 -168405870 + AT_rich Low_complexity Low_complexity 1 37 0 190 255 92 41 chr2 84851740 84851838 -168404745 - MER5B DNA MER1_type -70 108 6 544 42 0 0 chr2 84852013 84852085 -168404498 + AluY SINE Alu 1 72 -239 1471 72 5 0 chr2 84852086 84852280 -168404303 + AluY SINE Alu 116 310 -1 2316 175 52 0 chr2 84853925 84854330 -168402253 - MSTB LTR MaLR 0 426 1 362 381 85 0 chr2 84855478 84855667 -168400916 - MIR SINE MIR -56 206 2 267 184 20 0 chr2 84856343 84856392 -168400191 - MLT1I LTR MaLR 0 409 360 272 231 17 17 chr2 84857502 84857619 -168398964 + (TA)n Simple_repeat Simple_repeat 1 117 0 1373 204 193 29 chr2 84857859 84858437 -168398146 + LTR48 LTR ERV1 2 787 0 499 270 57 16 chr2 84858666 84858914 -168397669 - L1MEc LINE L1 -5477 919 662 905 277 35 40 chr2 84860046 84860447 -168396136 - L1MEc LINE L1 -5955 441 43 385 346 69 29 chr2 84860472 84860848 -168395735 - HERVL LTR ERVL -3350 2304 1914 2155 134 19 45 chr2 84860878 84861252 -168395331 - THE1B LTR MaLR 0 364 1 575 259 75 10 chr2 84861470 84861671 -168394912 - MER20 DNA MER1_type -4 215 2 1700 343 78 23 chr2 84861860 84862952 -168393631 - HERVL LTR ERVL -3642 1354 203 870 330 38 20 chr2 84863150 84863547 -168393036 - LTR16A LTR ERVL -14 436 33 279 0 0 0 chr2 84864104 84864135 -168392448 + (CA)n Simple_repeat Simple_repeat 1 31 0 243 343 22 52 chr2 84865402 84865536 -168391047 + MIR3 SINE MIR 7 136 -72 1474 221 210 32 chr2 84865764 84866225 -168390358 - L1M3e LINE L1 -6481 549 7 420 285 93 0 chr2 84866232 84866383 -168390200 + MIR SINE MIR 86 250 -12 21 57 0 0 chr2 84866630 84866665 -168389918 + AT_rich Low_complexity Low_complexity 1 35 0 1439 177 74 18 chr2 84867447 84867730 -168388853 - AluJo SINE Alu -13 299 1 1770 259 108 45 chr2 84868777 84869334 -168387249 + MER77 LTR ERV1 14 605 0 216 0 0 0 chr2 84869490 84869514 -168387069 + (CTATT)n Simple_repeat Simple_repeat 5 28 0 423 118 0 0 chr2 84869522 84869598 -168386985 + (TCTCC)n Simple_repeat Simple_repeat 3 78 0 214 351 68 0 chr2 84869964 84870038 -168386545 - L2 LINE L2 -38 3275 3197 210 157 39 20 chr2 84870536 84870587 -168385996 + T-rich Low_complexity Low_complexity 3 54 0 226 94 0 0 chr2 84870698 84870730 -168385853 + L1P3 LINE L1 5667 5698 -456 287 62 47 16 chr2 84871022 84871086 -168385497 + (TA)n Simple_repeat Simple_repeat 2 67 0 24 32 0 0 chr2 84871676 84871707 -168384876 + AT_rich Low_complexity Low_complexity 1 31 0 210 295 115 43 chr2 84871798 84871937 -168384646 - MIR SINE MIR -94 168 20 23 68 0 0 chr2 84872132 84872176 -168384407 + AT_rich Low_complexity Low_complexity 1 44 0 475 347 70 4 chr2 84872340 84872582 -168384001 + MIR SINE MIR 5 262 0 1312 126 117 0 chr2 84874845 84874945 -168381638 - MER30 DNA MER1_type 0 230 143 369 0 0 0 chr2 84874945 84874986 -168381597 + (TG)n Simple_repeat Simple_repeat 2 42 0 1312 126 117 0 chr2 84874986 84875091 -168381492 - MER30 DNA MER1_type -87 143 1 28 0 0 0 chr2 84876330 84876358 -168380225 + AT_rich Low_complexity Low_complexity 1 28 0 906 234 13 9 chr2 84876637 84876868 -168379715 + L1M4 LINE L1 3842 4073 -2073 487 133 0 12 chr2 84876873 84876956 -168379627 - MLT2D LTR ERVL -332 82 1 22 0 0 0 chr2 84877135 84877157 -168379426 + AT_rich Low_complexity Low_complexity 1 22 0 305 299 99 32 chr2 84877285 84877506 -168379077 - L1MEd LINE L1 -5263 856 621 537 179 56 153 chr2 84877771 84877967 -168378616 + MER5B DNA MER1_type 1 177 -1 668 240 73 10 chr2 84878112 84878304 -168378279 - MER3 DNA MER1_type 0 209 6 216 97 0 0 chr2 84879450 84879481 -168377102 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 297 190 0 51 chr2 84879875 84879954 -168376629 + L1M4 LINE L1 5358 5432 -746 5583 114 5 41 chr2 84880346 84881516 -168375067 + L1PA12 LINE L1 5019 6156 -12 1090 208 35 4 chr2 84881527 84881787 -168374796 + L1PB1 LINE L1 5874 6141 -10 10129 130 23 22 chr2 84881898 84883571 -168373012 - L1P LINE L1 -4461 1685 11 2247 112 0 0 chr2 84883687 84883981 -168372602 + AluSc SINE Alu 2 295 -14 192 97 0 0 chr2 84883995 84884026 -168372557 + (CA)n Simple_repeat Simple_repeat 2 32 0 531 335 52 8 chr2 84885109 84885357 -168371226 - LTR33 LTR ERVL -2 519 261 258 213 80 0 chr2 84886252 84886327 -168370256 - MIR3 SINE MIR -5 203 123 1549 181 10 33 chr2 84886905 84887208 -168369375 - AluJo SINE Alu -16 296 1 2276 19 0 4 chr2 84888195 84888458 -168368125 + L1PA5 LINE L1 5616 5877 -277 984 338 25 29 chr2 84889851 84890298 -168366285 + LTR16A LTR ERVL 1 445 -5 180 0 0 0 chr2 84891461 84891481 -168365102 + (T)n Simple_repeat Simple_repeat 1 20 0 28 29 0 0 chr2 84892007 84892042 -168364541 + AT_rich Low_complexity Low_complexity 1 35 0 229 118 39 0 chr2 84892726 84892777 -168363806 + (CA)n Simple_repeat Simple_repeat 2 54 0 183 167 0 0 chr2 84892767 84892809 -168363774 + (TA)n Simple_repeat Simple_repeat 1 42 0 * 271 266 141 33 chr2 84893207 84893511 -168363072 - L2 LINE L2 -564 2750 2414 23 68 0 0 chr2 84893607 84893651 -168362932 + AT_rich Low_complexity Low_complexity 1 44 0 247 385 13 23 chr2 84893902 84894040 -168362543 + MIR SINE MIR 45 186 -22 256 253 23 23 chr2 84894585 84894672 -168361911 - MLT1J LTR MaLR -19 492 406 1603 119 16 4 chr2 84895357 84895609 -168360974 + L1PA12 LINE L1 5912 6166 -2 1604 124 26 11 chr2 84895610 84895883 -168360700 + L1PB1 LINE L1 5874 6150 -1 241 307 216 0 chr2 84897283 84897371 -168359212 + MIR SINE MIR 33 139 -69 220 330 43 11 chr2 84897629 84897723 -168358860 - L2 LINE L2 0 3272 3176 276 390 53 19 chr2 84898130 84898394 -168358189 + L2 LINE L2 2812 3084 -188 198 0 0 0 chr2 84899223 84899245 -168357338 + (TTTTA)n Simple_repeat Simple_repeat 1 22 0 553 312 16 0 chr2 84901261 84901447 -168355136 + MER5A DNA MER1_type 1 189 0 1305 284 70 10 chr2 84901842 84902327 -168354256 + LTR40a LTR ERVL 3 516 -3 258 235 88 0 chr2 84902722 84902790 -168353793 + MLT1G1 LTR MaLR 6 79 -516 188 108 0 27 chr2 84903670 84903707 -168352876 + (TC)n Simple_repeat Simple_repeat 2 37 0 198 176 0 0 chr2 84904319 84904370 -168352213 + (TA)n Simple_repeat Simple_repeat 1 51 0 285 51 0 0 chr2 84904384 84904423 -168352160 + (TG)n Simple_repeat Simple_repeat 2 40 0 6652 143 43 11 chr2 84905080 84906269 -168350314 + Tigger3b DNA MER2_type 5 1231 0 1216 256 150 17 chr2 84907529 84908024 -168348559 + MLT1F1 LTR MaLR 1 565 -2 264 111 0 0 chr2 84908170 84908215 -168348368 + (TG)n Simple_repeat Simple_repeat 2 46 0 259 369 18 51 chr2 84908944 84909161 -168347422 + L3 LINE CR1 1136 1345 -232 215 364 51 8 chr2 84909161 84909279 -168347304 - L2 LINE L2 -4 3309 3187 1314 214 104 19 chr2 84909809 84910174 -168346409 - MSTD LTR MaLR 0 396 1 184 370 40 10 chr2 84910669 84910769 -168345814 + MIR SINE MIR 28 130 -132 188 279 47 0 chr2 84910790 84910833 -168345750 + L2 LINE L2 3211 3255 -17 183 268 0 0 chr2 84910799 84910840 -168345743 + MIR SINE MIR 218 258 -4 * 189 385 92 17 chr2 84911465 84911639 -168344944 - L3 LINE CR1 -56 1521 1335 1672 166 87 58 chr2 84912429 84912845 -168343738 - MSTA LTR MaLR 0 428 1 290 390 66 28 chr2 84913195 84913482 -168343101 + L2 LINE L2 301 598 -2716 289 323 103 0 chr2 84913503 84913658 -168342925 + L2 LINE L2 727 897 -2417 5988 152 56 36 chr2 84914875 84916080 -168340503 + MER109 Unknown Unknown 1203 2432 0 296 346 124 63 chr2 84916278 84916370 -168340213 + L2 LINE L2 2136 2221 -1093 1466 183 48 10 chr2 84916370 84916665 -168339918 - AluJo SINE Alu -6 306 1 296 346 124 63 chr2 84916665 84917300 -168339283 + L2 LINE L2 2221 2907 -407 5870 198 104 17 chr2 84917305 84918782 -168337801 - L1MC3 LINE L1 -21 7764 6160 213 167 0 0 chr2 84918787 84918841 -168337742 + (TA)n Simple_repeat Simple_repeat 2 55 0 314 275 163 38 chr2 84919788 84920101 -168336482 - L1ME4a LINE L1 -253 5868 5517 387 0 0 0 chr2 84920193 84920236 -168336347 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 342 0 0 0 chr2 84920964 84921002 -168335581 + (CA)n Simple_repeat Simple_repeat 2 39 0 255 79 0 0 chr2 84921242 84921280 -168335303 + (CA)n Simple_repeat Simple_repeat 1 38 0 1586 157 82 0 chr2 84921827 84922117 -168334466 + MLT2C2 LTR ERVL 2 315 -149 350 275 0 0 chr2 84922117 84922186 -168334397 + AluS SINE Alu 2 70 -232 984 183 0 0 chr2 84922223 84922387 -168334196 + FRAM SINE Alu 2 165 -1 379 264 11 0 chr2 84922392 84922479 -168334104 + MLT2C2 LTR ERVL 301 388 -76 812 154 25 37 chr2 84922482 84922644 -168333939 - L1M4 LINE L1 -569 5605 5446 398 303 91 28 chr2 84922816 84923070 -168333513 - L1MEd LINE L1 -5403 716 447 488 277 88 31 chr2 84923598 84924065 -168332518 - L1ME LINE L1 -413 5757 5263 2900 3 0 0 chr2 84924184 84924495 -168332088 + AluYa5 SINE Alu 1 311 0 4983 152 13 39 chr2 84925054 84925600 -168330983 + L1PA15 LINE L1 4754 5313 -852 2284 55 0 0 chr2 84925600 84925888 -168330695 + L1PA8 LINE L1 5883 6172 0 4983 152 13 39 chr2 84925888 84926065 -168330518 + L1PA15 LINE L1 5313 5493 -672 1732 176 3 3 chr2 84926065 84926360 -168330223 - AluJb SINE Alu -17 295 1 4983 152 13 39 chr2 84926360 84926943 -168329640 + L1PA15 LINE L1 5493 6046 -119 1394 171 98 25 chr2 84926943 84927229 -168329354 - THE1C LTR MaLR -68 307 1 330 153 14 42 chr2 84927649 84927721 -168328862 + L1PA16 LINE L1 6097 6166 0 2201 113 0 0 chr2 84928227 84928520 -168328063 + AluSc SINE Alu 1 293 -16 4164 222 43 12 chr2 84928664 84929791 -168326792 - L1 LINE L1 -840 5306 4145 1896 231 45 149 chr2 84929791 84931011 -168325572 - MER52A LTR ERV1 0 1755 663 2640 207 49 5 chr2 84931018 84931651 -168324932 - L1 LINE L1 -2000 4146 3486 318 150 12 38 chr2 84931651 84931731 -168324852 - L1PA15 LINE L1 0 6165 6088 269 353 7 20 chr2 84932151 84932304 -168324279 - L1 LINE L1 -2499 3647 3497 21 0 0 0 chr2 84932311 84932332 -168324251 + AT_rich Low_complexity Low_complexity 1 21 0 315 0 0 0 chr2 84932395 84932430 -168324153 + (T)n Simple_repeat Simple_repeat 1 35 0 3376 230 62 23 chr2 84932430 84932502 -168324081 - L1 LINE L1 -2739 3407 3339 2059 150 48 20 chr2 84932502 84932856 -168323727 - THE1B LTR MaLR 0 364 1 3376 230 62 23 chr2 84932856 84933812 -168322771 - L1 LINE L1 -2807 3339 2339 1009 250 27 5 chr2 84933814 84934034 -168322549 + MLT1A1 LTR MaLR 2 226 -139 982 228 0 0 chr2 84934063 84934247 -168322336 + MLT1A1 LTR MaLR 182 365 0 711 224 38 29 chr2 84934247 84934457 -168322126 - L1 LINE L1 -3804 2342 2131 222 296 0 0 chr2 84934616 84934687 -168321896 + T-rich Low_complexity Low_complexity 1 71 0 467 281 8 8 chr2 84934924 84935045 -168321538 + MLT1F LTR MaLR 1 121 -421 328 335 64 14 chr2 84935508 84935789 -168320794 + L1MC4a LINE L1 5549 5843 -1965 960 195 69 16 chr2 84935828 84935908 -168320675 + L1MB2 LINE L1 5086 5160 -1020 1734 176 0 0 chr2 84935908 84936222 -168320361 + AluSx SINE Alu 1 314 0 960 195 69 16 chr2 84936222 84936492 -168320091 + L1MB2 LINE L1 5160 5447 -733 7819 66 11 1 chr2 84936504 84938268 -168318315 + L1PA7 LINE L1 4312 6151 -3 3167 183 29 41 chr2 84938301 84938985 -168317598 + L1MB2 LINE L1 5494 6169 -2 222 280 0 0 chr2 84940232 84940282 -168316301 - L2 LINE L2 -16 3297 3248 * 474 344 51 9 chr2 84940270 84940485 -168316098 + MIR SINE MIR 18 241 -21 2656 43 0 0 chr2 84940822 84941126 -168315457 + AluY SINE Alu 2 305 -6 1831 101 115 62 chr2 84942731 84943087 -168313496 - THE1C LTR MaLR 0 375 1 21 0 0 0 chr2 84944016 84944037 -168312546 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr2 84944454 84944492 -168312091 + AT_rich Low_complexity Low_complexity 1 38 0 764 44 0 0 chr2 84945543 84945633 -168310950 - 5S rRNA rRNA -31 90 1 302 325 129 21 chr2 84947403 84947597 -168308986 + MIR SINE MIR 35 249 -13 1191 112 35 0 chr2 84948739 84948909 -168307674 - AluSq SINE Alu -10 303 128 243 61 0 0 chr2 84948909 84948942 -168307641 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 2051 130 3 0 chr2 84948942 84949226 -168307357 - AluSx SINE Alu -27 285 1 194 393 36 36 chr2 84949227 84949423 -168307160 + L2 LINE L2 2609 2804 -510 337 330 0 17 chr2 84949592 84949707 -168306876 + L2 LINE L2 3199 3311 -2 534 270 56 96 chr2 84950183 84950505 -168306078 - L2 LINE L2 0 3313 3005 482 286 32 91 chr2 84950531 84950870 -168305713 - MLT1I LTR MaLR -24 385 67 1659 215 106 32 chr2 84950875 84951345 -168305238 - MLT1D LTR MaLR 0 505 1 463 291 122 40 chr2 84951400 84951651 -168304932 - L2 LINE L2 -333 2980 2712 323 262 43 50 chr2 84952261 84952402 -168304181 - MIR SINE MIR -113 149 10 26 50 0 0 chr2 84952483 84952523 -168304060 + AT_rich Low_complexity Low_complexity 1 40 0 192 97 0 0 chr2 84953259 84953290 -168303293 + (TG)n Simple_repeat Simple_repeat 2 32 0 530 209 61 14 chr2 84955328 84955476 -168301107 - MER65C LTR ERV1 0 461 307 715 307 124 41 chr2 84955624 84956273 -168300310 + L1M4 LINE L1 2222 2983 -3163 2047 157 34 14 chr2 84956273 84956630 -168299953 - THE1B LTR MaLR 0 364 1 715 307 124 41 chr2 84956630 84956970 -168299613 + L1M4 LINE L1 2983 3293 -2853 265 310 17 30 chr2 84957138 84957314 -168299269 + L1M4 LINE L1 3510 3683 -2463 1580 233 16 81 chr2 84957314 84957868 -168298715 - MLT2B1 LTR ERVL -2 518 1 265 310 17 30 chr2 84957868 84957913 -168298670 + L1M4 LINE L1 3683 3727 -2419 2023 135 0 7 chr2 84957918 84958214 -168298369 + AluSx SINE Alu 2 295 -17 312 27 0 0 chr2 84958227 84958264 -168298319 + (CA)n Simple_repeat Simple_repeat 2 38 0 195 129 0 0 chr2 84958316 84958347 -168298236 + (TATATG)n Simple_repeat Simple_repeat 2 32 0 316 281 107 61 chr2 84958362 84958672 -168297911 + L1M4 LINE L1 3868 4191 -1955 475 314 129 55 chr2 84958778 84959694 -168296889 + L1M4 LINE L1 4406 5392 -754 25 51 0 0 chr2 84959724 84959763 -168296820 + AT_rich Low_complexity Low_complexity 1 39 0 26 30 0 0 chr2 84960086 84960119 -168296464 + AT_rich Low_complexity Low_complexity 1 33 0 343 394 113 17 chr2 84960305 84960840 -168295743 + L2 LINE L2 2496 3081 -191 2058 98 0 0 chr2 84961123 84961379 -168295204 + AluSc SINE Alu 38 293 -16 203 208 69 0 chr2 84961437 84961538 -168295045 + GA-rich Low_complexity Low_complexity 4 111 0 213 294 153 18 chr2 84961644 84961807 -168294776 - L2 LINE L2 -8 3305 3121 325 275 21 70 chr2 84962350 84962492 -168294091 + L1ME LINE L1 820 954 -5116 695 201 109 23 chr2 84962978 84963152 -168293431 - MER5A DNA MER1_type 0 189 1 327 293 0 50 chr2 84964307 84964406 -168292177 - MIR SINE MIR -168 94 1 2462 252 123 67 chr2 84964761 84965438 -168291145 + L1MC4 LINE L1 6337 6975 -1067 2107 138 0 0 chr2 84965438 84965736 -168290847 + AluSx SINE Alu 3 300 -12 2462 252 123 67 chr2 84965736 84966330 -168290253 + L1MC4 LINE L1 6975 7679 -363 2884 188 70 84 chr2 84966375 84967242 -168289341 + L1MA9 LINE L1 5420 6274 -38 27 29 0 0 chr2 84967242 84967276 -168289307 + AT_rich Low_complexity Low_complexity 1 34 0 308 262 24 0 chr2 84967319 84967403 -168289180 + L1MD3 LINE L1 7872 7957 -38 501 283 35 71 chr2 84969157 84969440 -168287143 - L2 LINE L2 -577 2737 2465 1538 192 18 11 chr2 84969796 84970077 -168286506 - AluSx SINE Alu -29 283 1 204 315 91 54 chr2 84970794 84971014 -168285569 - L2 LINE L2 0 3305 3093 290 292 34 0 chr2 84973061 84973150 -168283433 + MIR SINE MIR 28 119 -143 640 192 11 17 chr2 84973712 84973889 -168282694 + CT-rich Low_complexity Low_complexity 1 176 0 184 368 105 11 chr2 84974256 84974351 -168282232 + L2 LINE L2 3165 3268 -4 261 179 0 18 chr2 84974385 84974441 -168282142 - MIR SINE MIR -135 73 19 433 297 7 25 chr2 84975493 84975628 -168280955 - MIR SINE MIR -69 139 7 2709 7 0 0 chr2 84975795 84976092 -168280491 + AluY SINE Alu 1 297 -14 574 226 58 69 chr2 84976533 84976591 -168279992 + MLT1F LTR MaLR 1 58 -503 2168 106 7 3 chr2 84976591 84976894 -168279689 - AluSq SINE Alu -9 304 1 574 226 58 69 chr2 84976894 84977035 -168279548 + MLT1F LTR MaLR 58 196 -365 246 32 0 0 chr2 84977075 84977106 -168279477 + (TTTTG)n Simple_repeat Simple_repeat 4 34 0 872 232 151 47 chr2 84977148 84977467 -168279116 + MLT1F LTR MaLR 191 542 0 348 259 15 59 chr2 84977581 84977602 -168278981 + MLT1J LTR MaLR 69 89 -422 1455 219 19 19 chr2 84977602 84977967 -168278616 + MLT1A1 LTR MaLR 1 365 0 348 259 15 59 chr2 84977967 84978080 -168278503 + MLT1J LTR MaLR 89 197 -314 189 0 0 0 chr2 84978870 84978891 -168277692 + (T)n Simple_repeat Simple_repeat 1 21 0 207 0 0 0 chr2 84979804 84979827 -168276756 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 638 309 91 24 chr2 84981594 84981892 -168274691 - L2 LINE L2 -2 3311 2994 496 361 32 4 chr2 84981907 84982156 -168274427 - MIR SINE MIR 0 262 7 514 347 135 25 chr2 84982163 84982638 -168273945 - L2 LINE L2 -337 2977 2451 235 185 19 0 chr2 84982755 84982809 -168273774 + HsTC2 DNA Tc2 2 56 -1842 2067 110 3 0 chr2 84982846 84983136 -168273447 + AluSq SINE Alu 1 291 -22 282 179 0 0 chr2 84984004 84984060 -168272523 + (TA)n Simple_repeat Simple_repeat 2 57 0 245 273 23 0 chr2 84984060 84984148 -168272435 + L1MC4 LINE L1 6614 6703 -1339 213 216 0 0 chr2 84984148 84984185 -168272398 + (TATG)n Simple_repeat Simple_repeat 1 37 0 253 296 23 0 chr2 84984186 84984274 -168272309 + L1MC4 LINE L1 6614 6703 -1339 * 254 256 22 22 chr2 84984198 84984288 -168272295 - L1MC4 LINE L1 -1339 6703 6614 2147 101 3 0 chr2 84984585 84984882 -168271701 - AluSq SINE Alu -15 298 1 228 184 0 0 chr2 84984960 84985009 -168271574 + (TA)n Simple_repeat Simple_repeat 1 49 0 755 105 0 0 chr2 84986060 84986165 -168270418 - AluSx SINE Alu -14 295 191 1097 92 0 0 chr2 84986166 84986307 -168270276 - AluSx SINE Alu -171 141 1 22 35 0 0 chr2 84987971 84988000 -168268583 + AT_rich Low_complexity Low_complexity 1 29 0 294 176 0 0 chr2 84988235 84988286 -168268297 + AluSc SINE Alu 246 296 -3 274 293 186 50 chr2 84988469 84988682 -168267901 - HAL1 LINE L1 -343 2164 1981 1797 136 23 46 chr2 84988682 84989027 -168267556 - MER1B DNA MER1_type 0 337 1 274 293 186 50 chr2 84989027 84989297 -168267286 - HAL1 LINE L1 -526 1981 1615 317 304 83 46 chr2 84989410 84989998 -168266585 - HAL1 LINE L1 -1063 1444 835 290 217 29 29 chr2 84990235 84990304 -168266279 - L2 LINE L2 -37 3276 3208 275 239 14 134 chr2 84990578 84990720 -168265863 - MIR SINE MIR 0 262 138 260 250 120 0 chr2 84991862 84991954 -168264629 - L1MCa LINE L1 -2325 4101 3999 302 303 0 0 chr2 84992232 84992331 -168264252 - L1MCa LINE L1 -2701 3725 3627 591 280 122 36 chr2 84992366 84992834 -168263749 - L1MCa LINE L1 -2896 3530 3023 345 299 36 45 chr2 84993004 84993228 -168263355 - L1MCa LINE L1 -3622 2804 2583 524 327 22 26 chr2 84993421 84993647 -168262936 + MIR SINE MIR 37 261 -1 1429 196 33 11 chr2 84993890 84994165 -168262418 + AluJo SINE Alu 21 301 -11 21 36 0 0 chr2 84994323 84994351 -168262232 + AT_rich Low_complexity Low_complexity 1 28 0 5332 180 56 3 chr2 84995047 84996136 -168260447 - L1 LINE L1 -1510 4636 3490 331 322 75 40 chr2 84997013 84997212 -168259371 - HAL1 LINE L1 0 2507 2302 315 306 75 0 chr2 84997266 84997413 -168259170 - HAL1 LINE L1 -287 2220 2063 183 117 83 0 chr2 84997600 84997660 -168258923 + (TTATA)n Simple_repeat Simple_repeat 5 69 0 647 295 133 35 chr2 84997670 84998460 -168258123 - HAL1 LINE L1 -894 1613 735 195 69 0 0 chr2 84998460 84998489 -168258094 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 647 295 133 35 chr2 84998489 84998531 -168258052 - HAL1 LINE L1 -1772 735 699 899 106 0 8 chr2 84999230 84999353 -168257230 + AluSq/x SINE Alu 1 122 -191 4608 50 3 11 chr2 84999353 85000297 -168256286 + L1P2 LINE L1 4788 5725 -429 5699 220 52 29 chr2 85000410 85002284 -168254299 - L1M3 LINE L1 -743 5403 3515 321 102 20 0 chr2 85002274 85002323 -168254260 - L1MCa LINE L1 -4210 2216 2167 * 2390 185 81 26 chr2 85002325 85002547 -168254036 - L1MCa LINE L1 -4772 1654 1446 185 0 40 0 chr2 85002547 85002572 -168254011 + (TTTTG)n Simple_repeat Simple_repeat 1 26 0 2390 185 81 26 chr2 85002572 85002955 -168253628 - L1MCa LINE L1 -4980 1446 1016 448 186 49 20 chr2 85002959 85003061 -168253522 - FLAM_C SINE Alu -16 127 23 242 211 57 24 chr2 85003061 85003184 -168253399 - L1M3 LINE L1 -2880 3266 3140 2022 150 44 13 chr2 85003184 85003715 -168252868 + L1PA15-16 LINE L1 2436 3043 -3819 1618 124 38 4 chr2 85003715 85003981 -168252602 - L1PB1 LINE L1 -133 6018 5744 7760 18 3 0 chr2 85004155 85005173 -168251410 + L1HS LINE L1 5116 6139 -16 185 83 28 0 chr2 85005173 85005209 -168251374 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 898 226 85 34 chr2 85005791 85006187 -168250396 + MLT2D LTR ERVL 1 464 0 196 302 89 45 chr2 85006422 85006601 -168249982 - L2 LINE L2 -752 2562 2376 21 0 0 0 chr2 85007835 85007856 -168248727 + AT_rich Low_complexity Low_complexity 1 21 0 5048 120 15 4 chr2 85009599 85010420 -168246163 - L1P1 LINE L1 -712 5443 4614 3480 22 0 0 chr2 85010413 85010827 -168245756 + L1P1 LINE L1 4213 4626 -1520 * 2763 10 0 0 chr2 85010827 85011132 -168245451 - AluYa5 SINE Alu -6 305 1 192 195 73 0 chr2 85012913 85012954 -168243629 - MIR3 SINE MIR -9 199 156 270 297 110 7 chr2 85013002 85013136 -168243447 - MER5A DNA MER1_type -23 166 8 296 366 56 28 chr2 85014516 85014729 -168241854 - L2 LINE L2 -1 3271 3053 1709 164 156 13 chr2 85014965 85015338 -168241245 - MSTA LTR MaLR -2 426 1 2087 100 131 39 chr2 85015703 85015756 -168240827 + MSTA LTR MaLR 4 51 -377 2671 16 3 3 chr2 85015756 85016063 -168240520 + AluYb8 SINE Alu 1 307 -11 2087 100 131 39 chr2 85016063 85016398 -168240185 + MSTA LTR MaLR 51 428 0 2556 210 19 9 chr2 85016398 85016970 -168239613 + L1MB1 LINE L1 5567 6144 -24 258 283 125 7 chr2 85016970 85017122 -168239461 + L1ME3A LINE L1 5298 5467 -703 940 236 177 71 chr2 85017205 85017725 -168238858 - MLT1E2 LTR MaLR 0 626 52 301 297 48 28 chr2 85017810 85017955 -168238628 + L1ME3A LINE L1 5793 5940 -222 1154 233 7 31 chr2 85017970 85018262 -168238321 + AluJo SINE Alu 4 288 -14 6063 60 0 3 chr2 85018431 85019194 -168237389 - L1PA6 LINE L1 0 6154 5394 183 42 0 0 chr2 85019308 85019332 -168237251 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1621 169 7 25 chr2 85019338 85019622 -168236961 - AluJo SINE Alu -32 280 2 263 297 27 0 chr2 85019625 85019736 -168236847 + L1ME3A LINE L1 6042 6155 -15 375 250 75 33 chr2 85019796 85019916 -168236667 - L2 LINE L2 0 3313 3189 21 0 0 0 chr2 85020962 85020983 -168235600 + AT_rich Low_complexity Low_complexity 1 21 0 222 414 0 10 chr2 85022177 85022281 -168234302 + L2 LINE L2 2896 2998 -274 297 265 154 25 chr2 85023137 85023299 -168233284 + MIR SINE MIR 80 262 0 637 150 0 0 chr2 85023548 85023648 -168232935 + FRAM SINE Alu 71 170 -6 419 330 30 11 chr2 85023719 85023886 -168232697 - MIR SINE MIR -65 143 17 185 378 42 17 chr2 85025098 85025217 -168231366 - L2 LINE L2 0 3272 3151 279 111 22 0 chr2 85025345 85025390 -168231193 + MER91B DNA MER1_type 18 63 -127 382 319 154 18 chr2 85025410 85025689 -168230894 - L2 LINE L2 -534 2780 2464 208 328 0 15 chr2 85026353 85026420 -168230163 + MIR SINE MIR 197 262 0 241 308 42 42 chr2 85026844 85026987 -168229596 - MIR SINE MIR -74 188 46 201 288 144 24 chr2 85026961 85027086 -168229497 + MIR3 SINE MIR 41 180 -28 * 3519 48 7 0 chr2 85028144 85028583 -168228000 + L1PA5 LINE L1 5711 6152 -2 1151 147 5 5 chr2 85028587 85028778 -168227805 + AluSg/x SINE Alu 120 310 -2 370 270 44 69 chr2 85030688 85030847 -168225736 + MIR3 SINE MIR 38 192 -16 1088 149 171 50 chr2 85031758 85031862 -168224721 - Tigger1 DNA MER2_type 0 2418 2328 1816 104 30 20 chr2 85031862 85032160 -168224423 + AluSx SINE Alu 1 301 -11 1088 149 171 50 chr2 85032160 85032281 -168224302 - Tigger1 DNA MER2_type -90 2328 2223 234 0 0 0 chr2 85032281 85032307 -168224276 + (TG)n Simple_repeat Simple_repeat 1 26 0 1088 149 171 50 chr2 85032307 85032361 -168224222 - Tigger1 DNA MER2_type -195 2223 2104 * 6106 162 60 27 chr2 85032353 85033567 -168223016 - Tigger1 DNA MER2_type -1161 1257 4 213 315 70 4 chr2 85034036 85034188 -168222395 + MIR SINE MIR 34 254 -8 200 59 29 0 chr2 85034336 85034370 -168222213 + (TTG)n Simple_repeat Simple_repeat 2 36 0 2084 123 17 0 chr2 85034685 85034985 -168221598 + AluSx SINE Alu 1 305 -7 216 196 52 21 chr2 85035244 85035341 -168221242 + (TA)n Simple_repeat Simple_repeat 1 100 0 500 214 94 6 chr2 85035395 85035554 -168221029 + MER58 DNA MER1_type 65 237 -104 4591 184 42 17 chr2 85035898 85036997 -168219586 + L1MA4 LINE L1 5169 6293 -7 2518 55 0 3 chr2 85037937 85038244 -168218339 + AluY SINE Alu 3 308 -3 1356 276 78 41 chr2 85040313 85040849 -168215734 - MER68 LTR ERV1 -6 556 1 1192 158 59 1 chr2 85041045 85041323 -168215260 - Tigger3(Golem) DNA MER2_type -1 3028 40 202 329 65 52 chr2 85041999 85042154 -168214429 - L2 LINE L2 -221 3092 2936 15133 182 59 10 chr2 85043056 85046082 -168210501 + L1M1 LINE L1 16 3675 -3890 2086 155 52 6 chr2 85046095 85046443 -168210140 + THE1B LTR MaLR 1 364 0 1967 89 4 0 chr2 85046443 85046713 -168209870 + THE1B-int LTR MaLR 1 271 -1309 * 2999 99 2 13 chr2 85046702 85047158 -168209425 - L1P LINE L1 -1018 5128 4678 11143 87 29 1 chr2 85047165 85049536 -168207047 + L1PA7 LINE L1 3744 6140 -14 4020 226 44 2 chr2 85049536 85050543 -168206040 + L1M1 LINE L1 3807 4855 -2710 361 298 10 26 chr2 85050742 85050903 -168205680 - MIR3 SINE MIR -8 200 41 251 267 38 38 chr2 85051667 85051772 -168204811 - MLT1I LTR MaLR 0 409 305 364 293 54 66 chr2 85051859 85052012 -168204571 - MLT1I LTR MaLR -263 146 7 317 318 0 11 chr2 85052851 85052939 -168203644 - MIR SINE MIR -80 128 42 23 33 0 0 chr2 85053348 85053378 -168203205 + AT_rich Low_complexity Low_complexity 1 30 0 419 308 145 37 chr2 85054172 85054497 -168202086 + MLT1I LTR MaLR 48 407 -2 410 293 50 55 chr2 85054994 85055175 -168201408 + MIR SINE MIR 18 197 -65 285 98 0 0 chr2 85055996 85056037 -168200546 + (TA)n Simple_repeat Simple_repeat 2 42 0 2262 105 0 3 chr2 85057025 85057331 -168199252 + AluSg SINE Alu 3 307 -3 254 309 73 30 chr2 85057616 85057917 -168198666 + L1MEd LINE L1 982 1295 -4910 251 299 123 16 chr2 85058135 85058322 -168198261 + L1MEd LINE L1 1598 1804 -4592 228 197 0 49 chr2 85058336 85058397 -168198186 + L1MC4 LINE L1 6648 6705 -1337 696 189 75 0 chr2 85058647 85058806 -168197777 - MER3 DNA MER1_type -81 128 5 21 0 0 0 chr2 85058862 85058883 -168197700 + AT_rich Low_complexity Low_complexity 1 21 0 3901 198 63 93 chr2 85058898 85060109 -168196474 + L1MCa LINE L1 29 1202 -5224 1227 151 5 5 chr2 85060115 85060320 -168196263 - MSTA LTR MaLR -223 205 1 4548 236 68 36 chr2 85060354 85062281 -168194302 + L1M1 LINE L1 4931 6918 -745 * 9398 36 1 2 chr2 85062278 85063429 -168193154 - L1PA4 LINE L1 -874 5272 4123 7183 32 3 3 chr2 85063429 85064299 -168192284 + L1PA4 LINE L1 5275 6154 -1 189 0 0 0 chr2 85064304 85064325 -168192258 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 3963 190 42 7 chr2 85064360 85065172 -168191411 + L1MC1 LINE L1 5485 6324 -9 515 301 61 39 chr2 85065240 85066076 -168190507 + L1MCa LINE L1 2409 3210 -3216 2285 196 3 83 chr2 85066086 85066273 -168190310 + L1 LINE L1 2439 2639 -3507 1626 142 103 8 chr2 85066273 85066534 -168190049 + AluSq SINE Alu 3 288 -25 2285 196 3 83 chr2 85066534 85066545 -168190038 + L1 LINE L1 2639 2649 -3497 1890 145 0 10 chr2 85066545 85066834 -168189749 + AluSq SINE Alu 1 286 -27 2285 196 3 83 chr2 85066834 85066859 -168189724 + L1 LINE L1 2649 2674 -3472 186 43 0 0 chr2 85066859 85066882 -168189701 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2285 196 3 83 chr2 85066882 85067244 -168189339 + L1 LINE L1 2674 2979 -3167 319 193 147 4 chr2 85067245 85067258 -168189325 - L1P5 LINE L1 -345 5806 5796 210 43 0 64 chr2 85067258 85067305 -168189278 + (TA)n Simple_repeat Simple_repeat 1 44 0 319 193 147 4 chr2 85067305 85067404 -168189179 - L1P5 LINE L1 -355 5796 5681 548 332 54 8 chr2 85068483 85068702 -168187881 - MIR SINE MIR -26 236 16 1971 147 7 10 chr2 85068746 85069052 -168187531 + AluSx SINE Alu 1 305 -7 306 298 73 0 chr2 85069762 85069886 -168186697 + MER94 DNA DNA 2 134 0 21 0 0 0 chr2 85069949 85069970 -168186613 + AT_rich Low_complexity Low_complexity 1 21 0 236 354 31 0 chr2 85072741 85072837 -168183746 - MIR SINE MIR -98 164 66 419 271 43 7 chr2 85073133 85073273 -168183310 - LTR33A LTR ERVL -9 514 370 1237 240 39 39 chr2 85073823 85074264 -168182319 - MLT1D LTR MaLR -64 441 1 695 267 52 44 chr2 85075220 85075471 -168181112 + MIR SINE MIR 10 262 0 21 0 0 0 chr2 85076544 85076565 -168180018 + AT_rich Low_complexity Low_complexity 1 21 0 294 29 0 0 chr2 85076745 85076780 -168179803 + (TG)n Simple_repeat Simple_repeat 2 36 0 432 274 60 18 chr2 85077328 85077496 -168179087 + MER5B DNA MER1_type 4 178 0 509 278 47 0 chr2 85078022 85078191 -168178392 + MER5B DNA MER1_type 1 177 -1 294 325 92 0 chr2 85078995 85079115 -168177468 + MIR SINE MIR 109 239 -23 23 0 0 0 chr2 85079164 85079187 -168177396 + AT_rich Low_complexity Low_complexity 1 23 0 235 338 90 55 chr2 85080110 85080255 -168176328 - L2 LINE L2 0 3272 3123 1722 258 85 117 chr2 85080837 85081821 -168174762 + MER45C DNA AcHobo 1 953 0 21 57 0 0 chr2 85082452 85082487 -168174096 + AT_rich Low_complexity Low_complexity 1 35 0 1443 230 88 2 chr2 85083136 85083387 -168173196 - Tigger6 DNA MER2_type 0 1597 1296 2367 94 0 0 chr2 85083387 85083685 -168172898 + AluSc SINE Alu 2 299 -10 1443 230 88 2 chr2 85083685 85083841 -168172742 - Tigger6 DNA MER2_type -301 1296 1155 1390 190 41 10 chr2 85083851 85084146 -168172437 - Tigger6 DNA MER2_type -1293 304 1 25 0 0 0 chr2 85084157 85084182 -168172401 + AT_rich Low_complexity Low_complexity 1 25 0 2529 55 0 10 chr2 85084329 85084638 -168171945 + AluY SINE Alu 1 306 -5 451 328 34 11 chr2 85085127 85085302 -168171281 - MIR SINE MIR -52 210 32 197 277 92 46 chr2 85086445 85086575 -168170008 - MIR SINE MIR -46 216 81 4242 162 103 20 chr2 85086835 85087838 -168168745 - MER52C LTR ERV1 0 1278 1 207 340 43 35 chr2 85087912 85088053 -168168530 - L2 LINE L2 -2445 869 728 326 291 0 50 chr2 85088888 85089029 -168167554 + T-rich Low_complexity Low_complexity 5 138 0 1453 238 101 22 chr2 85089954 85090556 -168166027 - MER69 DNA AcHobo -18 2508 1859 440 289 153 13 chr2 85090553 85090781 -168165802 - MER69 DNA AcHobo -2255 271 12 * 5954 155 37 2 chr2 85091074 85092645 -168163938 + L1MA2 LINE L1 4680 6304 0 679 161 21 140 chr2 85094383 85094576 -168162007 + MER101B LTR ERV1 59 228 -342 234 241 36 48 chr2 85094714 85094797 -168161786 + MER101 LTR ERV1 358 439 -35 3895 138 30 45 chr2 85096133 85096806 -168159777 - MER4D LTR ERV1 -3 831 196 1839 146 3 7 chr2 85096806 85097139 -168159444 - AluSq SINE Alu 0 332 1 3895 138 30 45 chr2 85097139 85097211 -168159372 - MER4D LTR ERV1 -638 196 124 1602 203 149 59 chr2 85097234 85097825 -168158758 - LTR48B LTR ERV1 0 644 1 1007 211 5 0 chr2 85098113 85098298 -168158285 - LTR8 LTR ERV1 0 691 506 780 217 6 13 chr2 85098349 85098527 -168158056 - LTR8 LTR ERV1 -367 360 171 1650 155 158 19 chr2 85098538 85098946 -168157637 - LTR10A LTR ERV1 0 609 94 31238 233 18 28 chr2 85098979 85106332 -168150251 - HERVI LTR ERV1 -1 7784 501 773 218 45 107 chr2 85106405 85106713 -168149870 - HERVI LTR ERV1 -6360 289 1 1651 189 94 81 chr2 85106722 85107263 -168149320 - LTR10A LTR ERV1 -61 548 1 682 132 35 132 chr2 85107280 85107454 -168149129 - LTR8A LTR ERV1 -567 160 4 1699 197 65 37 chr2 85107959 85108444 -168148139 + LTR60 LTR ERV1 3 539 -47 229 218 73 73 chr2 85108444 85108568 -168148015 + MER51D LTR ERV1 505 628 -29 387 0 0 0 chr2 85108612 85108655 -168147928 + (TCTA)n Simple_repeat Simple_repeat 3 45 0 267 194 61 92 chr2 85108723 85108821 -168147762 - MER34C LTR ERV1 -2 583 489 230 216 20 0 chr2 85109172 85109223 -168147360 - MER34 LTR ERV1 -467 75 24 1039 228 107 80 chr2 85109357 85109805 -168146778 - MER31B LTR ERV1 0 466 7 21 0 0 0 chr2 85112049 85112070 -168144513 + AT_rich Low_complexity Low_complexity 1 21 0 306 315 27 0 chr2 85112865 85112938 -168143645 - L3 LINE CR1 -124 1453 1379 398 318 104 20 chr2 85112980 85113181 -168143402 - L3 LINE CR1 -183 1394 1177 279 206 48 0 chr2 85113530 85113593 -168142990 - MIR SINE MIR -75 187 122 2069 125 7 0 chr2 85113616 85113911 -168142672 + AluSg SINE Alu 1 297 -13 798 293 92 0 chr2 85114058 85114375 -168142208 + L1MB7 LINE L1 5830 6175 -9 363 243 171 26 chr2 85114612 85114764 -168141819 - HsTC2 DNA Tc2 -1724 174 1 388 360 79 18 chr2 85115632 85115860 -168140723 + MIR SINE MIR 3 244 -18 232 261 15 0 chr2 85115862 85115927 -168140656 + (CAT)n Simple_repeat Simple_repeat 3 68 0 378 0 0 0 chr2 85117727 85117769 -168138814 + (TG)n Simple_repeat Simple_repeat 1 42 0 212 322 115 0 chr2 85118284 85118371 -168138212 + MIR SINE MIR 108 204 -58 239 328 149 26 chr2 85119047 85119242 -168137341 - MIR SINE MIR -21 241 23 26 30 0 0 chr2 85123768 85123801 -168132782 + AT_rich Low_complexity Low_complexity 1 33 0 181 245 0 20 chr2 85124642 85124691 -168131892 + L3b LINE CR1 1536 1583 0 213 175 0 0 chr2 85124889 85124929 -168131654 + (TA)n Simple_repeat Simple_repeat 2 41 0 312 238 90 16 chr2 85125060 85125249 -168131334 + MER20B DNA MER1_type 581 783 0 213 398 9 19 chr2 85125270 85125378 -168131205 - MIR SINE MIR -70 138 32 225 154 0 0 chr2 85126019 85126058 -168130525 + (TA)n Simple_repeat Simple_repeat 1 39 0 1754 191 45 36 chr2 85126577 85127395 -168129188 - L1MD1 LINE L1 0 6242 5277 270 196 71 0 chr2 85127395 85127451 -168129132 - MLT1A2 LTR MaLR 0 374 315 494 205 32 12 chr2 85127503 85127742 -168128841 - L1MD1 LINE L1 -3218 2928 2645 807 255 212 64 chr2 85127756 85128175 -168128408 + MER77 LTR ERV1 1 481 -124 887 164 107 0 chr2 85128604 85128781 -168127802 - L1MB1 LINE L1 -1 6167 5972 3117 199 56 48 chr2 85128785 85129971 -168126612 + L1M3 LINE L1 4539 5739 -429 372 226 52 17 chr2 85129982 85130097 -168126486 + MER77 LTR ERV1 485 603 -2 795 216 68 56 chr2 85130099 85130493 -168126090 - L1MD1 LINE L1 -3522 2624 2226 647 244 114 78 chr2 85130495 85130711 -168125872 - MLT1D LTR MaLR 0 505 273 2659 27 0 0 chr2 85130711 85131006 -168125577 - AluY SINE Alu -16 295 1 647 244 114 78 chr2 85131006 85131097 -168125486 - MLT1D LTR MaLR -232 273 187 466 261 17 0 chr2 85131454 85131569 -168125014 - MER63A DNA MER1_type -36 174 58 637 188 0 9 chr2 85132077 85132189 -168124394 - FLAM_A SINE Alu -20 122 12 1625 188 0 41 chr2 85132332 85132646 -168123937 - AluJb SINE Alu -1 311 11 1947 170 3 30 chr2 85134444 85134814 -168121769 - MER46B DNA MER2_type -1 235 1 1973 151 44 3 chr2 85136041 85136379 -168120204 + LTR45B LTR ERV1 5 356 -133 1940 106 87 0 chr2 85138382 85138657 -168117926 + AluSc SINE Alu 1 299 -10 188 65 0 32 chr2 85140674 85140705 -168115878 + (TA)n Simple_repeat Simple_repeat 2 31 0 2443 253 48 3 chr2 85140836 85141460 -168115123 + MER82 DNA MER2_type 2 653 0 206 276 142 24 chr2 85143441 85143568 -168113015 - MIR SINE MIR -17 245 104 28 48 0 0 chr2 85143814 85143856 -168112727 + AT_rich Low_complexity Low_complexity 1 42 0 2045 65 68 0 chr2 85143886 85144197 -168112386 + AluY SINE Alu 1 329 0 3139 226 14 1 chr2 85144507 85145198 -168111385 - L1P LINE L1 -3905 2241 1542 2462 130 47 9 chr2 85145200 85145716 -168110867 + L1P4 LINE L1 5111 5639 -524 3379 170 20 5 chr2 85145767 85146414 -168110169 + L1PA13 LINE L1 4534 5190 -956 * 4014 120 49 0 chr2 85146390 85147007 -168109576 + L1PA13 LINE L1 5509 6155 -8 244 133 0 0 chr2 85147271 85147316 -168109267 + L1ME3A LINE L1 3187 3231 -2915 283 303 118 26 chr2 85147474 85147864 -168108719 + L1ME3A LINE L1 3514 3939 -2207 231 255 10 10 chr2 85148038 85148136 -168108447 + L1MC4 LINE L1 7121 7218 -824 924 233 20 5 chr2 85148259 85148461 -168108122 - MER2 DNA MER2_type -140 205 1 2045 250 64 14 chr2 85148461 85149105 -168107478 + L1MC4 LINE L1 7218 7893 -149 279 364 0 0 chr2 85149208 85149342 -168107241 + L1ME3A LINE L1 5450 5580 -586 2279 95 10 0 chr2 85149346 85149652 -168106931 + AluY SINE Alu 1 309 -2 702 258 120 42 chr2 85149707 85150269 -168106314 + MLT1E2 LTR MaLR 1 626 0 205 205 0 0 chr2 85150339 85150378 -168106205 + (TA)n Simple_repeat Simple_repeat 2 40 0 434 254 81 0 chr2 85150451 85150624 -168105959 + L1ME3A LINE L1 5782 5968 -202 944 150 0 0 chr2 85151978 85152111 -168104472 + FRAM SINE Alu 20 152 -24 700 231 6 0 chr2 85153478 85153660 -168102923 + MER53 DNA DNA 4 186 -3 1457 189 57 16 chr2 85155160 85155530 -168101053 - MER58D DNA MER1_type 0 386 2 315 0 0 0 chr2 85156277 85156312 -168100271 + (A)n Simple_repeat Simple_repeat 1 35 0 333 100 0 0 chr2 85157806 85157856 -168098727 + (A)n Simple_repeat Simple_repeat 1 50 0 242 192 82 41 chr2 85158772 85158845 -168097738 - MER20B DNA MER1_type -655 128 53 2044 83 11 11 chr2 85160373 85160649 -168095934 + THE1C LTR MaLR 1 276 -99 250 96 58 19 chr2 85160649 85160701 -168095882 - MLT2A1 LTR ERVL 0 453 400 225 0 0 0 chr2 85160716 85160741 -168095842 + (TA)n Simple_repeat Simple_repeat 2 26 0 2638 106 46 5 chr2 85160741 85161129 -168095454 - MLT2A1 LTR ERVL -40 404 1 20171 81 9 13 chr2 85161129 85163808 -168092775 - HERVL-A1 LTR ERVL 0 5654 2986 246 163 0 20 chr2 85164052 85164101 -168092482 + L2 LINE L2 3266 3313 0 1294 109 0 31 chr2 85164556 85164749 -168091834 + AluSp SINE Alu 115 301 -12 315 259 267 0 chr2 85165856 85165972 -168090611 + MIR SINE MIR 65 211 -51 533 251 91 10 chr2 85166259 85166458 -168090125 - MER96B DNA MER1_type? -202 215 1 264 345 53 23 chr2 85166796 85166967 -168089616 - MIR SINE MIR 0 262 87 435 331 43 20 chr2 85168389 85168643 -168087940 + MIR SINE MIR 2 261 -1 327 297 22 43 chr2 85172479 85172617 -168083966 + MIR SINE MIR 109 243 -19 428 244 122 20 chr2 85172659 85172856 -168083727 - MER113 DNA MER1_type? -221 300 84 260 315 140 34 chr2 85173138 85173316 -168083267 + MIR SINE MIR 28 224 -38 2475 52 7 19 chr2 85173560 85173867 -168082716 - AluY SINE Alu -5 306 4 7165 52 16 3 chr2 85175209 85176720 -168079863 + L1PA6 LINE L1 4437 5960 -194 475 307 132 9 chr2 85177142 85177370 -168079213 + L3 LINE CR1 1216 1471 -106 1675 93 0 0 chr2 85177595 85177811 -168078772 + AluSg/x SINE Alu 83 298 -14 25 31 0 0 chr2 85177886 85177918 -168078665 + AT_rich Low_complexity Low_complexity 1 32 0 189 0 0 0 chr2 85178743 85178764 -168077819 + (A)n Simple_repeat Simple_repeat 1 21 0 399 310 148 20 chr2 85180373 85180594 -168075989 - MIR SINE MIR -1 261 20 210 387 91 5 chr2 85181697 85181883 -168074700 + MIR SINE MIR 60 261 -1 559 240 33 82 chr2 85182712 85182895 -168073688 + MER5A DNA MER1_type 1 174 -15 189 190 165 51 chr2 85183601 85183680 -168072903 - L3 LINE CR1 -1108 469 382 229 377 0 9 chr2 85184024 85184130 -168072453 + L2 LINE L2 3168 3272 0 872 235 50 15 chr2 85184347 85184547 -168072036 - MER58A DNA MER1_type -17 207 1 420 303 124 32 chr2 85184664 85184882 -168071701 + MIR SINE MIR 7 244 -18 230 315 46 46 chr2 85188905 85189013 -168067570 + MIR SINE MIR 20 127 -135 252 244 61 43 chr2 85189381 85189496 -168067087 - MLT1I LTR MaLR 0 409 293 1669 195 30 46 chr2 85189517 85189701 -168066882 + MLT1B LTR MaLR 1 186 -204 2500 50 0 0 chr2 85189701 85189998 -168066585 + AluY SINE Alu 1 297 -14 1669 195 30 46 chr2 85189998 85190207 -168066376 + MLT1B LTR MaLR 186 388 -2 262 111 0 0 chr2 85191072 85191108 -168065475 + tRNA-Asp-GAC tRNA tRNA 1 36 -39 349 325 44 5 chr2 85191167 85191370 -168065213 + L1ME LINE L1 5564 5774 -347 1071 41 0 0 chr2 85191439 85191561 -168065022 + AluY SINE Alu 1 122 -189 3962 246 77 32 chr2 85191683 85192116 -168064467 + L1MB7 LINE L1 2849 3261 -2885 2438 97 0 0 chr2 85192116 85192426 -168064157 + AluSg SINE Alu 1 310 0 3962 246 77 32 chr2 85192426 85192491 -168064092 + L1MB7 LINE L1 3261 3322 -2824 1208 204 0 63 chr2 85192491 85192746 -168063837 - MER8 DNA MER2_type 0 239 1 3962 246 77 32 chr2 85192746 85193859 -168062724 + L1MB7 LINE L1 3322 4534 -1612 10680 229 26 22 chr2 85193889 85198225 -168058358 - L1PA16 LINE L1 -5 6864 2500 3639 204 86 16 chr2 85198232 85199522 -168057061 + L1MB7 LINE L1 4567 5980 -204 2143 113 0 0 chr2 85199522 85199847 -168056736 + AluSx SINE Alu 1 325 0 3639 204 86 16 chr2 85199847 85200023 -168056560 + L1MB7 LINE L1 5980 6142 -42 773 167 0 16 chr2 85200723 85200849 -168055734 + FLAM_C SINE Alu 3 126 -17 13413 208 39 16 chr2 85202024 85203664 -168052919 + L1PB1 LINE L1 1 1602 -5265 2292 130 8 3 chr2 85203664 85204017 -168052566 - THE1A LTR MaLR 0 355 1 10897 112 4 10 chr2 85204018 85204200 -168052383 - THE1A-int LTR MaLR -1 1579 1397 1805 97 4 0 chr2 85204200 85204438 -168052145 + AluY SINE Alu 1 239 -72 10897 112 4 10 chr2 85204438 85205843 -168050740 - THE1A-int LTR MaLR -183 1397 1 2512 107 3 0 chr2 85205843 85206197 -168050386 - THE1A LTR MaLR 0 355 1 13413 208 39 16 chr2 85206197 85211050 -168045533 + L1PB1 LINE L1 1601 6865 -2 310 286 60 30 chr2 85211380 85211651 -168044932 + MLT1I LTR MaLR 75 409 0 7096 40 7 2 chr2 85212107 85213419 -168043164 - L1PA4 LINE L1 -8 6147 4822 288 220 128 37 chr2 85213421 85213530 -168043053 + MER5C DNA MER1_type 1 119 -205 184 274 82 0 chr2 85213603 85213676 -168042907 + MER5C DNA MER1_type 230 308 -16 259 181 84 12 chr2 85214020 85214103 -168042480 - L1MC/D LINE L1 -2008 5800 5712 1388 65 16 0 chr2 85214828 85215014 -168041569 + L1PB1 LINE L1 5962 6150 -1 3941 126 52 77 chr2 85215375 85216180 -168040403 + LTR1 LTR ERV1 1 785 0 462 326 61 33 chr2 85219032 85219277 -168037306 + MIR SINE MIR 11 262 0 1242 126 0 6 chr2 85220266 85220448 -168036135 - AluSg SINE Alu -11 301 121 1109 215 117 16 chr2 85220463 85220831 -168035752 - L1MC/D LINE L1 -1286 4860 4456 931 116 0 0 chr2 85220850 85220971 -168035612 - AluSg SINE Alu -179 131 11 6605 238 115 25 chr2 85220971 85222182 -168034401 - L1MC2 LINE L1 -35 6727 5626 288 53 0 0 chr2 85222182 85222220 -168034363 + (CA)n Simple_repeat Simple_repeat 1 38 0 6605 238 115 25 chr2 85222220 85224442 -168032141 - L1MC2 LINE L1 -1136 5626 3605 742 197 0 0 chr2 85224442 85224564 -168032019 + FLAM_A SINE Alu 3 124 -9 6605 238 115 25 chr2 85224564 85226780 -168029803 - L1MC2 LINE L1 -3157 3605 500 1383 256 63 53 chr2 85226767 85227387 -168029196 - L1MCa LINE L1 -5781 645 20 * 1321 270 137 23 chr2 85227427 85227753 -168028830 + L1MDa LINE L1 1836 2123 -4417 234 0 0 0 chr2 85227753 85227779 -168028804 + (TA)n Simple_repeat Simple_repeat 1 26 0 1321 270 137 23 chr2 85227779 85228357 -168028226 + L1MDa LINE L1 2123 2858 -3682 1207 274 132 8 chr2 85228379 85229119 -168027464 + L1MDa LINE L1 2989 3820 -2720 366 246 64 0 chr2 85229125 85229235 -168027348 + L1MDa LINE L1 3873 3989 -2551 304 282 48 10 chr2 85229263 85229366 -168027217 - L1MC4 LINE L1 -1341 6701 6595 7835 204 44 42 chr2 85229533 85229722 -168026861 - L1 LINE L1 -1908 5657 5470 2239 73 0 7 chr2 85229722 85230022 -168026561 + AluY SINE Alu 1 298 -13 7835 204 44 42 chr2 85230022 85232160 -168024423 - L1 LINE L1 -2095 5470 3316 26 0 0 0 chr2 85232176 85232202 -168024381 + AT_rich Low_complexity Low_complexity 1 26 0 1730 242 125 52 chr2 85232209 85233314 -168023269 - L1 LINE L1 -4371 3194 2098 654 341 56 20 chr2 85233697 85234087 -168022496 - L1 LINE L1 -5806 1690 1287 207 357 24 75 chr2 85234197 85234410 -168022173 - L3 LINE CR1 -82 1495 1294 225 338 0 12 chr2 85234435 85234515 -168022068 + MIR SINE MIR 48 126 -136 29 47 0 0 chr2 85235161 85235204 -168021379 + AT_rich Low_complexity Low_complexity 1 43 0 739 301 40 54 chr2 85235968 85236396 -168020187 - MER90 LTR ERV1 -125 450 29 21 89 0 0 chr2 85237630 85237686 -168018897 + AT_rich Low_complexity Low_complexity 1 56 0 407 181 28 0 chr2 85238551 85238623 -168017960 + MER39 LTR ERV1 1 74 -633 1129 162 20 34 chr2 85238624 85238828 -168017755 + AluJo SINE Alu 1 201 -111 2441 170 26 5 chr2 85238828 85239246 -168017337 + MER39 LTR ERV1 270 696 -11 21 71 0 0 chr2 85239757 85239799 -168016784 + AT_rich Low_complexity Low_complexity 1 42 0 21 36 0 0 chr2 85239924 85239952 -168016631 + AT_rich Low_complexity Low_complexity 1 28 0 234 235 284 0 chr2 85241166 85241247 -168015336 - MIR SINE MIR -10 252 149 1136 260 61 65 chr2 85241260 85241848 -168014735 - L1ME1 LINE L1 -9 6157 5596 195 361 0 0 chr2 85241880 85241941 -168014642 - MIR SINE MIR -187 75 15 1728 93 15 19 chr2 85243165 85243424 -168013159 - L1PA10 LINE L1 -10 6158 5901 218 321 0 25 chr2 85244348 85244429 -168012154 - MIR SINE MIR -18 244 166 24 67 0 0 chr2 85244429 85244474 -168012109 + AT_rich Low_complexity Low_complexity 1 45 0 275 136 0 23 chr2 85244483 85244527 -168012056 + MLT1A2 LTR MaLR 5 47 -327 2080 154 14 19 chr2 85244529 85244893 -168011690 + THE1B LTR MaLR 1 362 -2 10880 113 10 6 chr2 85244893 85246445 -168010138 + THE1B-int LTR MaLR 14 1571 -9 2175 140 26 14 chr2 85246445 85246794 -168009789 + THE1B LTR MaLR 12 364 0 808 228 66 115 chr2 85246795 85247142 -168009441 + MLT1A2 LTR MaLR 45 374 0 230 297 25 68 chr2 85247156 85247274 -168009309 - MIR SINE MIR -131 131 19 512 246 0 0 chr2 85247648 85247762 -168008821 - FLAM_C SINE Alu -29 114 1 3978 220 92 32 chr2 85247943 85248397 -168008186 + L1M4c LINE L1 1096 1521 -4861 199 71 48 0 chr2 85248397 85248439 -168008144 + A-rich Low_complexity Low_complexity 2 45 0 3978 220 92 32 chr2 85248439 85249648 -168006935 + L1M4c LINE L1 1521 4008 -2374 22 35 0 0 chr2 85249685 85249714 -168006869 + AT_rich Low_complexity Low_complexity 1 29 0 311 307 108 33 chr2 85249725 85249937 -168006646 - L1M4 LINE L1 -3240 2906 2679 241 362 102 24 chr2 85250160 85250287 -168006296 - MIR SINE MIR -100 162 26 218 382 22 61 chr2 85252372 85252600 -168003983 - L2 LINE L2 -225 3047 2829 642 176 29 0 chr2 85252719 85252855 -168003728 - L1MB2 LINE L1 -7 6164 6025 7857 218 60 53 chr2 85252876 85256564 -168000019 - L1MA7 LINE L1 -9 6282 2466 4119 179 66 5 chr2 85256597 85258079 -167998504 - L1PA11 LINE L1 -83 6091 4531 331 216 91 0 chr2 85258095 85258183 -167998400 + L1PA11 LINE L1 4415 4510 -1636 3946 169 87 59 chr2 85258912 85259953 -167996630 - MER11C LTR ERVK 0 1071 1 2408 102 3 28 chr2 85260231 85260595 -167995988 + THE1A LTR MaLR 1 355 0 22 0 0 0 chr2 85261097 85261119 -167995464 + AT_rich Low_complexity Low_complexity 1 22 0 290 222 78 11 chr2 85261393 85261483 -167995100 + MER96B DNA MER1_type? 314 409 -8 337 273 195 39 chr2 85261807 85261885 -167994698 - MER5A DNA MER1_type -1 188 123 2017 181 101 0 chr2 85261885 85262272 -167994311 + MSTB LTR MaLR 1 426 0 337 273 195 39 chr2 85262272 85262347 -167994236 - MER5A DNA MER1_type -66 123 11 396 118 132 0 chr2 85262632 85262700 -167993883 + L1PA10 LINE L1 6082 6158 -10 188 250 33 17 chr2 85263102 85263162 -167993421 - L2 LINE L2 -11 3302 3242 1721 229 69 5 chr2 85263669 85264089 -167992494 - MLT1D LTR MaLR -58 447 1 604 341 39 12 chr2 85264204 85264459 -167992124 - MLT1I LTR MaLR -140 269 8 247 228 44 32 chr2 85265091 85265249 -167991334 + (TATAA)n Simple_repeat Simple_repeat 5 164 0 23 0 0 0 chr2 85265423 85265446 -167991137 + AT_rich Low_complexity Low_complexity 1 23 0 827 186 29 35 chr2 85266438 85266610 -167989973 - MER20 DNA MER1_type -48 171 1 446 305 155 10 chr2 85267488 85267688 -167988895 - MIR SINE MIR -16 246 18 1774 138 170 16 chr2 85268335 85268706 -167987877 - MSTA LTR MaLR 0 428 1 2180 124 0 3 chr2 85270256 85270570 -167986013 + AluSq SINE Alu 1 313 0 370 115 54 8 chr2 85270948 85271078 -167985505 + (TA)n Simple_repeat Simple_repeat 2 137 0 2093 136 0 10 chr2 85271192 85271500 -167985083 + AluSg SINE Alu 5 309 -1 1113 253 66 29 chr2 85271647 85271995 -167984588 - MLT1F LTR MaLR -181 361 1 958 184 14 154 chr2 85272173 85272596 -167983987 + MLT1A1 LTR MaLR 1 364 -1 2409 71 0 0 chr2 85272793 85273088 -167983495 - AluY SINE Alu -16 295 1 1330 232 7 0 chr2 85273114 85273394 -167983189 - AluJo SINE Alu -30 282 1 222 262 0 83 chr2 85273425 85273509 -167983074 + L2 LINE L2 3233 3309 -4 21 0 0 0 chr2 85274920 85274941 -167981642 + AT_rich Low_complexity Low_complexity 1 21 0 204 200 0 0 chr2 85275990 85276035 -167980548 + CT-rich Low_complexity Low_complexity 4 48 0 2413 143 43 10 chr2 85276970 85277384 -167979199 + MSTA LTR MaLR 1 428 0 324 308 33 8 chr2 85277384 85277504 -167979079 + MIR SINE MIR 65 187 -75 4328 266 50 14 chr2 85277755 85278855 -167977728 + L1 LINE L1 578 1717 -4936 2935 114 12 0 chr2 85278857 85279277 -167977306 - MER57B LTR ERV1 -9 425 1 1103 211 65 20 chr2 85279277 85279633 -167976950 + L1 LINE L1 1712 2083 -4570 1027 270 155 36 chr2 85279610 85280498 -167976085 + L1MA7 LINE L1 2688 3636 -938 * 2125 113 0 0 chr2 85280525 85280825 -167975758 + AluY SINE Alu 1 300 -11 2322 77 3 10 chr2 85280827 85281137 -167975446 + AluSp SINE Alu 1 308 -5 6646 209 73 91 chr2 85281153 85282007 -167974576 + L1MA7 LINE L1 3644 4512 -3198 1098 239 17 4 chr2 85282007 85282237 -167974346 + MER8 DNA MER2_type 7 239 0 6646 209 73 91 chr2 85282237 85282696 -167973887 + L1MA7 LINE L1 4512 4978 -2732 1589 188 7 23 chr2 85282696 85283005 -167973578 - AluJb SINE Alu -8 304 1 6646 209 73 91 chr2 85283005 85284432 -167972151 + L1MA7 LINE L1 4978 6517 -1193 2417 50 7 0 chr2 85284432 85284731 -167971852 - AluY SINE Alu -4 307 7 6646 209 73 91 chr2 85284731 85285721 -167970862 + L1MA7 LINE L1 6517 7523 -187 1695 225 95 6 chr2 85285721 85286226 -167970357 + Tigger7 DNA MER2_type 1 2486 -1 663 165 196 0 chr2 85286227 85286385 -167970198 + L1MA7 LINE L1 7522 7710 0 385 290 99 0 chr2 85286494 85286625 -167969958 + L1 LINE L1 4507 4650 -2915 10638 155 9 16 chr2 85286692 85289403 -167967180 - L1PA11 LINE L1 -1 6173 3478 207 0 0 0 chr2 85289410 85289433 -167967150 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2130 116 0 0 chr2 85289435 85289727 -167966856 + AluSg SINE Alu 1 292 -18 508 159 80 26 chr2 85289742 85289893 -167966690 + L1ME3A LINE L1 5160 5318 -828 * 3266 217 59 18 chr2 85289866 85290718 -167965865 + L1 LINE L1 4677 5563 -2002 36233 44 6 1 chr2 85290919 85296194 -167960389 + L1PA4 LINE L1 856 6155 0 762 255 112 0 chr2 85296208 85296486 -167960097 + L1ME3A LINE L1 7097 7405 -184 692 200 19 32 chr2 85296556 85296711 -167959872 + MER2 DNA MER2_type 56 208 -137 2064 162 36 21 chr2 85297040 85297428 -167959155 + MER57A LTR ERV1 1 394 -9 1695 213 68 68 chr2 85297480 85298115 -167958468 + MER92B LTR ERV1 2 636 0 355 301 114 38 chr2 85298586 85298798 -167957785 - MIR SINE MIR -7 255 30 212 352 11 0 chr2 85298911 85298999 -167957584 + MIR SINE MIR 172 260 -2 240 351 60 15 chr2 85299002 85299136 -167957447 - MIR SINE MIR -122 140 1 339 233 6 129 chr2 85299975 85300138 -167956445 + L2 LINE L2 3171 3313 0 1856 199 19 61 chr2 85300707 85301134 -167955449 + L1M4c LINE L1 3 411 -5973 2033 168 58 32 chr2 85301154 85301436 -167955147 + L1MB3 LINE L1 5708 6008 -175 1347 168 138 63 chr2 85301436 85301588 -167954995 - MSTA LTR MaLR 0 428 289 1850 138 44 14 chr2 85301588 85301885 -167954698 + AluSx SINE Alu 7 312 0 1347 168 138 63 chr2 85301885 85302130 -167954453 - MSTA LTR MaLR -139 289 1 2033 168 58 32 chr2 85302130 85302311 -167954272 + L1MB3 LINE L1 6008 6183 0 22 0 0 0 chr2 85302348 85302370 -167954213 + AT_rich Low_complexity Low_complexity 1 22 0 297 308 127 58 chr2 85303498 85303638 -167952945 - L2 LINE L2 -1553 1761 1632 1554 221 84 40 chr2 85303638 85304136 -167952447 - MLT2B1 LTR ERVL 0 520 1 297 308 127 58 chr2 85304136 85304287 -167952296 - L2 LINE L2 -1682 1632 1450 234 213 121 28 chr2 85304337 85304478 -167952105 + L1MC5 LINE L1 7632 7785 -176 326 269 185 60 chr2 85304604 85304939 -167951644 + MLT1F LTR MaLR 30 406 -136 192 337 99 10 chr2 85305385 85305486 -167951097 + MIR SINE MIR 57 166 -96 232 343 76 0 chr2 85306318 85306528 -167950055 - L1ME LINE L1 -4893 1491 1266 21 36 0 0 chr2 85306681 85306709 -167949874 + AT_rich Low_complexity Low_complexity 1 28 0 300 283 76 0 chr2 85307038 85307130 -167949453 - L1ME LINE L1 -5930 442 344 361 328 15 8 chr2 85308044 85308175 -167948408 + MLT1G1 LTR MaLR 1 132 -463 2167 111 0 7 chr2 85308594 85308892 -167947691 + AluSx SINE Alu 3 298 -14 197 242 152 15 chr2 85308958 85309024 -167947559 - MIR3 SINE MIR -15 193 119 759 216 153 95 chr2 85309106 85309485 -167947098 + MER57A LTR ERV1 1 401 -2 640 301 58 32 chr2 85309667 85310023 -167946560 + MLT1F1 LTR MaLR 47 420 -122 1353 211 73 6 chr2 85310368 85310724 -167945859 - Tigger6a DNA MER2_type 0 1083 704 414 79 32 0 chr2 85310765 85310828 -167945755 - L1PA6 LINE L1 -4 6150 6086 1435 47 0 171 chr2 85310828 85311102 -167945481 + L1P3 LINE L1 5402 5628 -526 2557 209 78 31 chr2 85311104 85311746 -167944837 - Tigger6a DNA MER2_type -374 709 38 2323 64 3 7 chr2 85312897 85313193 -167943390 + AluY SINE Alu 1 295 -16 3648 138 14 5 chr2 85313992 85314578 -167942005 - L1PA16 LINE L1 -270 5896 5306 1071 177 41 29 chr2 85314578 85314817 -167941766 + L1PA16 LINE L1 5921 6166 0 1786 116 43 13 chr2 85314840 85315143 -167941440 + L1PA8 LINE L1 5861 6172 0 288 321 97 0 chr2 85316125 85316259 -167940324 - L1ME LINE L1 -477 5644 5498 490 115 26 0 chr2 85316847 85316925 -167939658 + MADE1 DNA Mariner 1 80 0 265 323 39 26 chr2 85317155 85317310 -167939273 + HAL1 LINE L1 574 730 -1777 25 53 0 18 chr2 85317511 85317544 -167939039 + AT_rich Low_complexity Low_complexity 1 34 -22 1281 192 169 0 chr2 85317544 85317851 -167938732 + MER46B DNA MER2_type 1 234 -2 25 53 0 18 chr2 85317851 85317874 -167938709 + AT_rich Low_complexity Low_complexity 34 56 0 1160 169 91 0 chr2 85318136 85318250 -167938333 + L1MA9 LINE L1 6034 6136 -176 459 63 0 0 chr2 85318250 85318313 -167938270 + (CA)n Simple_repeat Simple_repeat 1 63 0 1160 169 91 0 chr2 85318313 85318441 -167938142 + L1MA9 LINE L1 6136 6298 -14 243 333 119 8 chr2 85319556 85319682 -167936901 + MIR SINE MIR 20 159 -103 294 231 51 0 chr2 85320547 85320625 -167935958 + MIR SINE MIR 66 147 -115 3903 125 14 24 chr2 85320653 85321286 -167935297 - MER41B LTR ERV1 0 635 9 725 316 36 4 chr2 85321499 85321746 -167934837 - MIR SINE MIR -1 261 7 23 0 0 0 chr2 85322003 85322026 -167934557 + AT_rich Low_complexity Low_complexity 1 23 0 1795 129 147 24 chr2 85322665 85323046 -167933537 + MSTA LTR MaLR 1 428 0 750 157 107 0 chr2 85324560 85324700 -167931883 - Tigger5 DNA MER2_type -92 2231 2077 784 288 123 60 chr2 85324786 85325289 -167931294 - MLT1H1 LTR MaLR -7 548 14 260 250 0 0 chr2 85325323 85325375 -167931208 - Tigger3(Golem) DNA MER2_type -2 3027 2976 1028 291 78 6 chr2 85326175 85326506 -167930077 + MLT2E LTR ERVL 10 368 -260 252 269 32 21 chr2 85326507 85326600 -167929983 + MLT2E LTR ERVL 481 574 -54 183 322 46 11 chr2 85326938 85327025 -167929558 + L2 LINE L2 3223 3312 -1 291 234 40 48 chr2 85328129 85328253 -167928330 + L1MC5 LINE L1 7454 7576 -385 704 169 9 126 chr2 85328325 85328556 -167928027 + MLT1D LTR MaLR 1 204 -301 781 199 0 0 chr2 85328566 85328707 -167927876 + MLT1D LTR MaLR 364 504 -1 28 48 0 0 chr2 85328718 85328760 -167927823 + AT_rich Low_complexity Low_complexity 1 42 0 25 51 0 0 chr2 85328855 85328894 -167927689 + AT_rich Low_complexity Low_complexity 1 39 0 1968 212 50 115 chr2 85329308 85330050 -167926533 - LTR8A LTR ERV1 0 727 34 194 346 157 35 chr2 85330177 85330495 -167926088 + L2 LINE L2 2621 2977 -337 448 261 17 17 chr2 85331484 85331599 -167924984 - MER58B DNA MER1_type -46 295 181 754 224 6 49 chr2 85331599 85331782 -167924801 - AluSg/x SINE Alu -5 307 133 498 234 171 0 chr2 85331782 85331940 -167924643 - MER58B DNA MER1_type -156 185 1 819 239 65 32 chr2 85332209 85332518 -167924065 + HsTC2 DNA Tc2 1 319 -1579 4577 40 30 0 chr2 85333072 85333643 -167922940 - LTR10C LTR ERV1 0 591 4 245 277 29 28 chr2 85334560 85334667 -167921916 + MIR3 SINE MIR 58 169 -39 52 30 0 0 chr2 85335029 85335095 -167921488 + AT_rich Low_complexity Low_complexity 1 66 0 2137 131 3 0 chr2 85335829 85336127 -167920456 - AluSq SINE Alu -12 301 3 1477 189 70 31 chr2 85336343 85336702 -167919881 + MLT1A2 LTR MaLR 2 374 0 251 323 10 21 chr2 85337076 85337172 -167919411 - L2 LINE L2 -20 3293 3199 224 316 198 28 chr2 85337756 85337933 -167918650 + MIR SINE MIR 17 223 -39 289 261 0 0 chr2 85338092 85338157 -167918426 - MER117 DNA MER1_type -48 149 85 234 228 70 0 chr2 85338414 85338471 -167918112 + Tigger5 DNA MER2_type 2 62 -2261 1315 138 58 13 chr2 85338493 85338718 -167917865 + Tigger5 DNA MER2_type 2086 2320 -3 236 183 0 33 chr2 85338718 85338778 -167917805 + (TATG)n Simple_repeat Simple_repeat 2 59 0 538 246 121 20 chr2 85339598 85339797 -167916786 - MER20 DNA MER1_type 0 219 1 206 368 13 0 chr2 85340712 85340788 -167915795 - L3 LINE CR1 -348 1229 1153 188 278 148 9 chr2 85340902 85340984 -167915599 + MIR SINE MIR 126 252 -6 188 172 0 0 chr2 85340984 85341013 -167915570 + L2 LINE L2 3228 3256 -16 434 263 35 103 chr2 85442608 85442741 -167813842 - MIR SINE MIR 0 262 150 1373 197 118 0 chr2 85442741 85443020 -167813563 + AluJb SINE Alu 1 312 0 434 263 35 103 chr2 85443020 85443118 -167813465 - MIR SINE MIR -112 150 47 872 281 37 56 chr2 85445430 85445963 -167810620 + PABL_B LTR ERV1 1 667 0 183 42 0 0 chr2 85446228 85446252 -167810331 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 672 356 124 8 chr2 85446591 85447099 -167809484 + L2 LINE L2 1133 1699 -1615 2077 235 79 38 chr2 85447337 85448320 -167808263 + L1MC3 LINE L1 378 1319 -5245 2000 145 0 0 chr2 85448320 85448609 -167807974 + AluSx SINE Alu 3 291 -21 180 0 0 0 chr2 85448610 85448630 -167807953 + (TA)n Simple_repeat Simple_repeat 1 20 0 2077 235 79 38 chr2 85448630 85449027 -167807556 + L1MC3 LINE L1 1318 1816 -4748 622 266 124 33 chr2 85449062 85449564 -167807019 + L1MC3 LINE L1 2103 2646 -3918 1723 142 0 0 chr2 85449564 85449824 -167806759 + AluSx SINE Alu 40 299 -13 622 266 124 33 chr2 85449824 85449999 -167806584 + L1MC3 LINE L1 2646 2804 -3760 286 286 38 0 chr2 85450089 85450194 -167806389 + L1MC3 LINE L1 2814 2922 -3642 * 7002 224 43 17 chr2 85450189 85453383 -167803200 + L1MC3 LINE L1 3962 7432 -771 2627 181 50 39 chr2 85453384 85454004 -167802579 + MER73 LTR ERVL 18 644 0 2832 213 86 11 chr2 85454005 85454718 -167801865 + L1MC3 LINE L1 7430 8195 -8 249 234 13 13 chr2 85456247 85456324 -167800259 - MLT1F LTR MaLR 0 542 466 227 281 0 0 chr2 85456632 85456689 -167799894 - MLT1F LTR MaLR -461 81 25 294 87 0 0 chr2 85457038 85457084 -167799499 + (CA)n Simple_repeat Simple_repeat 2 47 0 28 48 0 0 chr2 85457183 85457225 -167799358 + AT_rich Low_complexity Low_complexity 1 42 0 207 361 28 19 chr2 85457539 85457647 -167798936 - MIR SINE MIR -65 143 52 196 288 17 0 chr2 85458162 85458221 -167798362 - L3b LINE CR1 -299 1284 1225 2071 134 10 3 chr2 85458759 85459066 -167797517 - AluSg SINE Alu -1 309 1 1727 210 96 23 chr2 85459274 85459361 -167797222 - MER47B DNA MER2_type -1908 415 336 3843 155 95 8 chr2 85459361 85460121 -167796462 - LTR1B LTR ERV1 0 826 1 1727 210 96 23 chr2 85460121 85460419 -167796164 - MER47B DNA MER2_type -1987 336 2 2360 145 42 28 chr2 85461146 85461574 -167795009 + Tigger2a DNA MER2_type 1 434 0 3443 122 17 2 chr2 85462189 85462712 -167793871 - L1P3 LINE L1 -5920 541 11 1467 218 82 99 chr2 85463471 85464045 -167792538 + L1ME1 LINE L1 5612 6178 0 923 178 52 0 chr2 85464028 85464219 -167792364 + L1M4 LINE L1 4745 4945 -1201 * 5866 86 8 23 chr2 85465024 85465915 -167790668 + L1PA8A LINE L1 5225 6102 -29 552 343 86 7 chr2 85466456 85466789 -167789794 - L1ME3A LINE L1 -324 5846 5488 1203 195 20 79 chr2 85466812 85467115 -167789468 + AluJo SINE Alu 1 285 -27 23 54 0 0 chr2 85467115 85467152 -167789431 + AT_rich Low_complexity Low_complexity 1 37 0 29 47 0 0 chr2 85467180 85467223 -167789360 + AT_rich Low_complexity Low_complexity 1 43 0 302 237 0 0 chr2 85467331 85467390 -167789193 - FRAM/FAM SINE Alu -105 61 3 426 325 75 29 chr2 85467406 85467862 -167788721 - L1ME3A LINE L1 -769 5377 4901 197 254 123 41 chr2 85467865 85467987 -167788596 - L2 LINE L2 -1277 2037 1906 229 347 66 30 chr2 85468938 85469105 -167787478 - L2 LINE L2 -1012 2302 2130 709 245 0 6 chr2 85470436 85470599 -167785984 + LTR41 LTR ERVL 16 177 -596 792 211 31 122 chr2 85470741 85471068 -167785515 + LTR41 LTR ERVL 470 766 -7 458 307 90 25 chr2 85472205 85472449 -167784134 + MIR SINE MIR 3 262 0 2437 7 57 0 chr2 85472919 85473200 -167783383 + AluYa5 SINE Alu 1 297 -14 184 277 135 81 chr2 85473902 85474050 -167782533 - L2 LINE L2 -1051 2263 2108 1340 226 40 16 chr2 85474464 85474840 -167781743 + LTR37A LTR ERV1 21 405 -21 237 65 0 0 chr2 85475003 85475034 -167781549 + (T)n Simple_repeat Simple_repeat 1 31 0 21 57 0 0 chr2 85475347 85475382 -167781201 + AT_rich Low_complexity Low_complexity 1 35 0 13757 141 34 18 chr2 85475994 85478122 -167778461 + Tigger1 DNA MER2_type 2 2173 -245 1737 186 9 16 chr2 85478122 85478440 -167778143 + 7SLRNA srpRNA srpRNA 1 316 -4 13757 141 34 18 chr2 85478440 85478689 -167777894 + Tigger1 DNA MER2_type 2173 2417 -1 22 35 0 0 chr2 85478710 85478739 -167777844 + AT_rich Low_complexity Low_complexity 1 29 0 194 378 10 0 chr2 85478935 85479033 -167777550 - L2 LINE L2 -2372 942 844 3716 219 19 11 chr2 85479129 85480034 -167776549 + L1P LINE L1 4492 5403 -743 30756 105 14 25 chr2 85480141 85480480 -167776103 - L1P3 LINE L1 -392 5762 5421 2018 126 17 0 chr2 85480480 85480781 -167775802 - AluSp SINE Alu -3 310 5 30756 105 14 25 chr2 85480781 85485675 -167770908 - L1P3 LINE L1 -733 5421 595 482 281 114 70 chr2 85486250 85486549 -167770034 + MLT1I LTR MaLR 1 312 -97 2364 88 0 0 chr2 85487090 85487385 -167769198 + AluSc SINE Alu 1 295 -14 496 339 42 28 chr2 85487515 85487869 -167768714 - L1ME3A LINE L1 -312 5858 5500 402 375 49 32 chr2 85488718 85489185 -167767398 + L2 LINE L2 2834 3308 -5 2040 102 13 20 chr2 85489553 85489858 -167766725 - AluSx SINE Alu -4 308 6 224 186 17 0 chr2 85490098 85490157 -167766426 + (TAGA)n Simple_repeat Simple_repeat 3 62 0 194 391 60 49 chr2 85490638 85490822 -167765761 - L2 LINE L2 -2828 486 301 21 0 0 0 chr2 85490933 85490954 -167765629 + AT_rich Low_complexity Low_complexity 1 21 0 2303 109 0 0 chr2 85490982 85491285 -167765298 + AluSg SINE Alu 1 303 -7 188 343 30 0 chr2 85491914 85491981 -167764602 + L3 LINE CR1 1362 1430 -147 286 231 90 0 chr2 85492501 85492579 -167764004 - L2 LINE L2 -1 3312 3228 197 304 29 14 chr2 85493680 85493749 -167762834 + L2 LINE L2 3244 3313 0 637 105 0 0 chr2 85494416 85494511 -167762072 + AluSg/x SINE Alu 215 309 -3 198 0 0 0 chr2 85495421 85495443 -167761140 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 465 348 36 40 chr2 85495855 85496131 -167760452 + MLT1K LTR MaLR 61 335 -253 2207 164 96 31 chr2 85496345 85496895 -167759688 - LTR60 LTR ERV1 0 586 1 2140 84 51 27 chr2 85497672 85497968 -167758615 + AluSp SINE Alu 1 303 -10 207 186 0 0 chr2 85497990 85498033 -167758550 + (CATATA)n Simple_repeat Simple_repeat 6 48 0 22 0 0 0 chr2 85498272 85498294 -167758289 + AT_rich Low_complexity Low_complexity 1 22 0 2517 88 75 0 chr2 85498309 85498682 -167757901 - L1PA7 LINE L1 0 6154 5754 422 302 17 23 chr2 85499351 85499523 -167757060 - MLT1H LTR MaLR -15 534 364 936 271 147 39 chr2 85499545 85500064 -167756519 + MLT1G1 LTR MaLR 5 595 0 235 148 49 10 chr2 85500064 85500122 -167756461 - MLT1G1 LTR MaLR -207 388 267 279 206 96 0 chr2 85501253 85501326 -167755257 - MER116 DNA Mariner 0 80 1 1165 184 65 20 chr2 85501439 85501733 -167754850 - L1MA4 LINE L1 -69 6231 5925 2027 136 68 40 chr2 85501735 85502087 -167754496 + THE1B LTR MaLR 3 364 0 4023 89 6 0 chr2 85502087 85502629 -167753954 + THE1B-int LTR MaLR 1 545 -1035 4598 72 9 0 chr2 85502629 85503211 -167753372 - LTR14C LTR ERVK 0 587 1 37042 75 12 4 chr2 85503213 85503815 -167752768 - HERVK14C LTR ERVK -3 7414 6818 180 111 0 0 chr2 85503815 85503842 -167752741 + (CAG)n Simple_repeat Simple_repeat 2 28 0 37042 75 12 4 chr2 85503842 85508173 -167748410 - HERVK14C LTR ERVK -599 6818 2441 2164 145 0 0 chr2 85508281 85508636 -167747947 + L1PA8 LINE L1 5817 6171 0 3080 161 13 7 chr2 85508797 85509659 -167746924 + L1MA8 LINE L1 4922 5793 -507 791 256 112 59 chr2 85509659 85509980 -167746603 - MER2 DNA MER2_type -7 338 1 2391 151 26 30 chr2 85509980 85510477 -167746106 + L1MA8 LINE L1 5786 6280 -11 1055 63 21 7 chr2 85511009 85511151 -167745432 - L1PA4 LINE L1 -234 5921 5778 389 43 0 0 chr2 85511151 85511196 -167745387 + L1PA6 LINE L1 6099 6145 -9 248 335 153 11 chr2 85511321 85511497 -167745086 + MIR SINE MIR 42 242 -20 236 158 35 0 chr2 85512034 85512091 -167744492 + (TA)n Simple_repeat Simple_repeat 1 59 0 434 126 21 32 chr2 85513100 85513195 -167743388 + L1MA4 LINE L1 6198 6291 -9 1332 231 11 4 chr2 85513218 85513499 -167743084 - Tigger3(Golem) DNA MER2_type -2744 285 3 302 200 80 27 chr2 85513514 85513589 -167742994 - L1M4b LINE L1 -6778 81 3 228 303 45 22 chr2 85513943 85514032 -167742551 + L2 LINE L2 3182 3272 0 2768 129 71 4 chr2 85514645 85515124 -167741459 - MER9 LTR ERVK 0 511 1 31 26 0 0 chr2 85516416 85516454 -167740129 + AT_rich Low_complexity Low_complexity 1 38 0 1767 318 35 10 chr2 85516653 85517231 -167739352 + L1MDb LINE L1 142 733 -5810 1604 271 78 34 chr2 85517430 85518400 -167738183 + L1MDb LINE L1 1069 2081 -4459 3613 180 37 12 chr2 85518400 85519078 -167737505 - MSTA-int LTR MaLR -956 695 1 2018 143 127 18 chr2 85519078 85519464 -167737119 - MSTA LTR MaLR 0 428 1 2910 250 52 18 chr2 85519464 85520665 -167735918 + L1MDb LINE L1 3473 4713 -1827 53 17 0 0 chr2 85521541 85521601 -167734982 + AT_rich Low_complexity Low_complexity 1 60 0 197 146 21 0 chr2 85521719 85521767 -167734816 + (TA)n Simple_repeat Simple_repeat 1 49 0 366 206 44 0 chr2 85521775 85521843 -167734740 - FLAM_A SINE Alu -27 106 36 1530 296 10 28 chr2 85522119 85522629 -167733954 + L1M3e LINE L1 -771 4294967025 -6523 890 256 5 49 chr2 85522744 85523185 -167733398 + L1M3e LINE L1 770 1107 -4221 266 241 74 12 chr2 85523153 85523315 -167733268 + L1M3e LINE L1 3322 3493 -2835 * 3943 202 117 89 chr2 85523315 85524510 -167732073 + MER52A LTR ERV1 1 1229 -526 820 187 81 56 chr2 85524762 85524960 -167731623 + MER52A LTR ERV1 1207 1409 -346 287 278 37 62 chr2 85525000 85525162 -167731421 + MER52A LTR ERV1 1593 1750 -5 5562 201 13 14 chr2 85525208 85526485 -167730098 + L1M3e LINE L1 3512 4787 -1541 6479 201 15 15 chr2 85526675 85528165 -167728418 + L1 LINE L1 3449 4937 -1209 5529 124 15 8 chr2 85528149 85529240 -167727343 + L1P4 LINE L1 4456 5553 -615 * 416 237 164 31 chr2 85529340 85529627 -167726956 - L1MEc LINE L1 -3258 2822 2498 1248 201 52 48 chr2 85529683 85529992 -167726591 - AluJo SINE Alu -2 310 1 630 245 66 85 chr2 85530058 85530575 -167726008 - L1MEc LINE L1 -3616 2464 2001 868 302 93 22 chr2 85530588 85531178 -167725405 - L1MEc LINE L1 -4307 1954 1323 323 254 24 85 chr2 85531179 85531344 -167725239 - MER39 LTR ERV1 0 707 553 687 200 0 8 chr2 85531344 85531469 -167725114 + FLAM_C SINE Alu 1 124 -19 717 206 148 11 chr2 85531487 85531676 -167724907 - MER39 LTR ERV1 -136 571 357 532 230 92 20 chr2 85531646 85531823 -167724760 - MER39 LTR ERV1 -362 180 1 * 380 275 84 51 chr2 85531823 85532158 -167724425 - L1MEc LINE L1 -4906 1176 831 441 257 173 10 chr2 85532770 85533077 -167723506 - L1MEc LINE L1 -5131 939 583 1622 175 60 169 chr2 85533122 85533901 -167722682 + LTR8A LTR ERV1 34 727 0 507 319 70 67 chr2 85533908 85534250 -167722333 - L1MEc LINE L1 -5520 550 208 183 42 0 0 chr2 85534331 85534355 -167722228 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 301 264 0 22 chr2 85534438 85534529 -167722054 - L1 LINE L1 -1675 4471 4383 2245 114 0 0 chr2 85534546 85534844 -167721739 + AluY SINE Alu 1 298 -13 330 252 159 9 chr2 85535150 85535257 -167721326 + MER5B DNA MER1_type 1 123 -55 655 178 0 0 chr2 85535258 85535376 -167721207 - FLAM_C SINE Alu -11 132 15 180 182 23 45 chr2 85535382 85535426 -167721157 - MER5B DNA MER1_type -124 54 12 181 263 0 0 chr2 85535739 85535777 -167720806 - L2 LINE L2 -557 2757 2720 1814 151 0 28 chr2 85536520 85536811 -167719772 + AluJb SINE Alu 1 283 -29 891 70 0 0 chr2 85536811 85536939 -167719644 + (TAGA)n Simple_repeat Simple_repeat 4 131 0 22 94 0 0 chr2 85537374 85537438 -167719145 + AT_rich Low_complexity Low_complexity 1 64 0 1370 210 153 38 chr2 85537609 85538235 -167718348 + LTR48 LTR ERV1 1 644 0 28 61 0 0 chr2 85539910 85539959 -167716624 + AT_rich Low_complexity Low_complexity 1 49 0 392 210 72 29 chr2 85540355 85540493 -167716090 - LTR16A1 LTR ERVL -3 454 311 385 352 85 10 chr2 85541866 85542065 -167714518 - MIR SINE MIR -1 261 48 180 0 0 0 chr2 85543343 85543363 -167713220 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 189 74 0 0 chr2 85543820 85543847 -167712736 + (TAA)n Simple_repeat Simple_repeat 2 28 0 1192 232 69 0 chr2 85543990 85544236 -167712347 + Tigger7 DNA MER2_type 10 272 -461 585 183 0 0 chr2 85544237 85544330 -167712253 + Tigger7 DNA MER2_type 2398 2490 -1 1861 112 42 3 chr2 85544371 85544657 -167711926 - AluSc SINE Alu -12 297 1 187 293 104 47 chr2 85544737 85544843 -167711740 - MIR SINE MIR -148 114 3 666 321 85 56 chr2 85544951 85545488 -167711095 + L2 LINE L2 2759 3313 0 297 0 0 0 chr2 85545521 85545554 -167711029 + (CA)n Simple_repeat Simple_repeat 2 34 0 615 228 101 0 chr2 85545624 85545773 -167710810 + MER3 DNA MER1_type 35 198 -11 679 336 67 27 chr2 85545920 85546322 -167710261 + L2 LINE L2 2896 3313 0 261 57 0 0 chr2 85546472 85546507 -167710076 + (TG)n Simple_repeat Simple_repeat 2 36 0 359 236 22 0 chr2 85546791 85546880 -167709703 + MER96B DNA MER1_type? 20 110 -307 575 180 47 99 chr2 85546959 85547135 -167709448 - MER96B DNA MER1_type? -151 266 103 742 179 0 108 chr2 85547135 85547347 -167709236 + MER53 DNA DNA 1 189 0 575 180 47 99 chr2 85547347 85547403 -167709180 - MER96B DNA MER1_type? -314 103 46 3173 82 5 7 chr2 85547806 85548255 -167708328 + LTR7 LTR ERV1 1 448 -2 309 26 0 0 chr2 85548866 85548904 -167707679 + (TG)n Simple_repeat Simple_repeat 1 38 0 288 137 0 0 chr2 85548910 85548961 -167707622 + (GA)n Simple_repeat Simple_repeat 2 52 0 21 0 0 0 chr2 85549108 85549129 -167707454 + AT_rich Low_complexity Low_complexity 1 21 0 1116 212 91 69 chr2 85549154 85549606 -167706977 + MLT1C LTR MaLR 1 462 -5 292 276 41 10 chr2 85549715 85549813 -167706770 - MER5A DNA MER1_type -77 112 12 2385 89 0 6 chr2 85550933 85551247 -167705336 + AluSq SINE Alu 1 312 -1 248 226 71 0 chr2 85551734 85551818 -167704765 + L1MC5 LINE L1 7687 7776 -185 383 369 7 28 chr2 85552038 85552179 -167704404 + L2 LINE L2 3134 3271 -1 323 275 88 27 chr2 85552826 85552944 -167703639 + MIR SINE MIR 25 150 -58 27 49 0 0 chr2 85553411 85553452 -167703131 + AT_rich Low_complexity Low_complexity 1 41 0 294 301 84 36 chr2 85553719 85554051 -167702532 - L1ME LINE L1 -535 5627 5280 282 56 0 0 chr2 85554054 85554090 -167702493 + (TG)n Simple_repeat Simple_repeat 1 36 0 340 251 61 8 chr2 85554312 85554444 -167702139 - L1P LINE L1 -1138 5008 4876 1524 211 13 60 chr2 85554612 85554995 -167701588 + MLT1A1 LTR MaLR 1 365 0 196 220 20 20 chr2 85555276 85555326 -167701257 + L2 LINE L2 2226 2275 -1039 2745 209 47 50 chr2 85555612 85555837 -167700746 - L1MB8 LINE L1 -1 6988 6764 2385 182 55 14 chr2 85555837 85556326 -167700257 - LTR22 LTR ERVK 0 509 1 2745 209 47 50 chr2 85556326 85556894 -167699689 - L1MB8 LINE L1 -225 6764 6198 2009 246 96 38 chr2 85556892 85556960 -167699623 - L1MB8 LINE L1 -1262 5695 5632 * 2227 92 41 0 chr2 85556960 85557254 -167699329 - AluSg SINE Alu -4 306 1 2009 246 96 38 chr2 85557254 85558053 -167698530 - L1MB8 LINE L1 -1325 5632 4778 4652 255 51 18 chr2 85558068 85559966 -167696617 - L1MB8 LINE L1 -2259 4698 2774 1253 271 41 52 chr2 85560463 85561024 -167695559 - L1MB8 LINE L1 -4599 2360 1806 561 234 117 0 chr2 85561025 85561162 -167695421 - L1MB8 LINE L1 -5751 1108 956 3333 206 28 38 chr2 85561173 85561721 -167694862 + L1MA4 LINE L1 4013 4565 -1735 1707 157 3 37 chr2 85561721 85562020 -167694563 + AluSq SINE Alu 1 289 -24 3333 206 28 38 chr2 85562020 85563467 -167693116 + L1MA4 LINE L1 4565 5926 -374 1962 153 30 35 chr2 85563468 85563834 -167692749 - THE1B LTR MaLR 0 364 1 6735 134 37 1 chr2 85563834 85564837 -167691746 - THE1B-int LTR MaLR 0 1580 542 4752 43 10 3 chr2 85564837 85565420 -167691163 + LTR14C LTR ERVK 1 587 0 29669 82 3 12 chr2 85565421 85569448 -167687135 + HERVK14C LTR ERVK 2 3993 -3424 4351 109 74 10 chr2 85569548 85570253 -167686330 + L1PA16 LINE L1 5408 6157 -9 21 36 0 0 chr2 85570253 85570281 -167686302 + AT_rich Low_complexity Low_complexity 1 28 0 192 97 0 0 chr2 85570558 85570589 -167685994 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 618 231 0 0 chr2 85570591 85570708 -167685875 - FLAM_A SINE Alu -16 117 1 1716 192 0 0 chr2 85570743 85571035 -167685548 - AluJb SINE Alu -20 292 1 2466 41 0 3 chr2 85571048 85571342 -167685241 - AluY SINE Alu -18 293 1 257 328 52 0 chr2 85571766 85571882 -167684701 + MIR SINE MIR 45 166 -96 27 29 0 0 chr2 85572813 85572847 -167683736 + AT_rich Low_complexity Low_complexity 1 34 0 23 0 0 0 chr2 85572882 85572905 -167683678 + AT_rich Low_complexity Low_complexity 1 23 0 3859 186 56 24 chr2 85572953 85573824 -167682759 - L1MB1 LINE L1 -1 6167 5269 441 313 103 47 chr2 85573905 85574390 -167682193 + L1ME LINE L1 5280 5791 -330 183 80 0 0 chr2 85575257 85575282 -167681301 + (TATATG)n Simple_repeat Simple_repeat 4 28 0 1624 196 67 22 chr2 85576101 85576505 -167680078 - L1MC3 LINE L1 -11 7774 7353 1092 265 63 40 chr2 85576772 85577198 -167679385 + MER74B LTR ERVL 49 484 -138 195 69 0 0 chr2 85577409 85577438 -167679145 + (T)n Simple_repeat Simple_repeat 1 29 0 1905 120 7 18 chr2 85578543 85578851 -167677732 - AluSg SINE Alu 0 305 1 228 202 39 115 chr2 85578959 85579063 -167677520 - MLT1H LTR MaLR -16 533 438 250 309 0 0 chr2 85579176 85579244 -167677339 - MLT1H LTR MaLR -375 174 107 25 0 0 0 chr2 85579471 85579496 -167677087 + AT_rich Low_complexity Low_complexity 1 25 0 32 0 0 0 chr2 85580372 85580404 -167676179 + AT_rich Low_complexity Low_complexity 1 32 0 314 329 121 54 chr2 85581463 85581703 -167674880 - MIR SINE MIR 0 262 7 253 287 85 0 chr2 85582587 85582681 -167673902 - MLT1K LTR MaLR -6 582 481 202 263 0 40 chr2 85582727 85582803 -167673780 + C-rich Low_complexity Low_complexity 5 77 0 2024 131 0 7 chr2 85583028 85583333 -167673250 - AluSx SINE Alu -5 307 5 252 0 0 0 chr2 85584665 85584693 -167671890 + (TG)n Simple_repeat Simple_repeat 2 29 0 2150 84 3 14 chr2 85584693 85584979 -167671604 - AluY SINE Alu -27 284 2 4460 146 61 19 chr2 85585556 85586948 -167669635 + pTR5 LTR ERV1 741 2606 0 277 238 102 41 chr2 85587473 85587717 -167668866 - L1MEc LINE L1 -2973 3242 2984 297 0 0 0 chr2 85587837 85587870 -167668713 + (TC)n Simple_repeat Simple_repeat 1 33 0 273 29 0 0 chr2 85587871 85587905 -167668678 + (TG)n Simple_repeat Simple_repeat 2 35 0 4059 268 42 11 chr2 85587911 85589360 -167667223 - L1 LINE L1 -2479 3667 2174 5254 209 50 19 chr2 85589363 85590126 -167666457 + L1MA8 LINE L1 3883 4707 -1439 369 0 0 0 chr2 85590126 85590167 -167666416 + (CA)n Simple_repeat Simple_repeat 2 42 0 5254 209 50 19 chr2 85590167 85590734 -167665849 + L1MA8 LINE L1 4707 5255 -891 4634 179 47 10 chr2 85590726 85591966 -167664617 + L1PA16 LINE L1 4890 6163 -3 * 386 296 6 45 chr2 85592530 85592706 -167663877 + A-rich Low_complexity Low_complexity 3 171 0 691 231 113 96 chr2 85592761 85593515 -167663068 - L1M4 LINE L1 -1162 4984 4218 2027 189 29 31 chr2 85593527 85594041 -167662542 + L1MA8 LINE L1 5773 6285 -6 425 293 203 12 chr2 85594089 85594512 -167662071 - L1MEc LINE L1 -4030 2366 1863 234 0 0 0 chr2 85594705 85594731 -167661852 + (TA)n Simple_repeat Simple_repeat 2 27 0 1688 137 19 4 chr2 85594731 85594993 -167661590 - AluSx SINE Alu -26 286 21 461 309 118 20 chr2 85595301 85595657 -167660926 - L1MEc LINE L1 -4530 1866 1476 240 248 64 67 chr2 85595916 85596214 -167660369 - L1MEc LINE L1 -5001 1204 908 4037 200 62 5 chr2 85596899 85597694 -167658889 - MER21B LTR ERV1 -23 840 1 724 191 77 41 chr2 85597825 85598019 -167658564 + MLT1F1 LTR MaLR 367 567 0 28 82 0 27 chr2 85598597 85598707 -167657876 + AT_rich Low_complexity Low_complexity 1 107 0 24 0 0 0 chr2 85598961 85598985 -167657598 + AT_rich Low_complexity Low_complexity 1 24 0 420 207 0 0 chr2 85599623 85599705 -167656878 - MER58A DNA MER1_type -8 216 135 346 282 0 0 chr2 85599738 85599809 -167656774 - MER58A DNA MER1_type -36 71 1 349 182 0 0 chr2 85600204 85600259 -167656324 + Tigger5 DNA MER2_type 1 55 -2268 * 352 233 0 0 chr2 85600228 85600301 -167656282 + Tigger5 DNA MER2_type 2251 2323 0 1877 180 14 39 chr2 85600409 85600881 -167655702 + MER89 LTR ERV1 1 559 0 976 171 18 0 chr2 85601449 85601619 -167654964 - AluJb SINE Alu -5 307 135 418 277 124 23 chr2 85602250 85602427 -167654156 + MIR SINE MIR 2 196 -66 25 51 0 0 chr2 85602598 85602637 -167653946 + AT_rich Low_complexity Low_complexity 1 39 0 515 226 78 79 chr2 85603011 85604038 -167652545 - L1MC5 LINE L1 0 7808 6782 1852 169 3 0 chr2 85604038 85604346 -167652237 - AluJb SINE Alu -1 311 3 515 226 78 79 chr2 85604346 85604767 -167651816 - L1MC5 LINE L1 -1026 6782 6720 438 20 0 0 chr2 85604767 85604818 -167651765 + (CA)n Simple_repeat Simple_repeat 2 52 0 515 226 78 79 chr2 85604818 85605555 -167651028 - L1MC5 LINE L1 -1088 6720 5984 337 346 11 16 chr2 85605557 85605739 -167650844 - L1 LINE L1 -2526 3620 3440 2982 126 21 9 chr2 85605871 85606397 -167650186 - L1MA5A LINE L1 0 6297 5766 753 111 8 0 chr2 85606397 85606523 -167650060 - AluY SINE Alu -1 310 184 5234 155 24 34 chr2 85606523 85608038 -167648545 - L1MA5A LINE L1 -577 5720 4232 3849 173 17 50 chr2 85608047 85608805 -167647778 + MER44D DNA MER2_type 1 605 0 240 329 116 13 chr2 85608812 85609201 -167647382 - L1 LINE L1 -3038 3108 2680 1058 187 74 0 chr2 85609293 85609523 -167647060 - L1MA7 LINE L1 -32 6259 6013 952 112 13 7 chr2 85609540 85609692 -167646891 - L1 LINE L1 -1429 4717 4565 319 258 111 91 chr2 85609851 85610103 -167646480 - HAL1b LINE L1 -512 836 580 295 217 11 22 chr2 85610110 85610202 -167646381 + CT-rich Low_complexity Low_complexity 5 95 0 243 339 33 25 chr2 85610218 85610339 -167646244 - MIR SINE MIR -137 125 4 1231 179 53 73 chr2 85610711 85611013 -167645570 - AluJo SINE Alu -16 296 1 28 0 0 0 chr2 85611723 85611751 -167644832 + AT_rich Low_complexity Low_complexity 1 28 0 1802 129 92 35 chr2 85612305 85612622 -167643961 - MER1B DNA MER1_type 0 337 3 2203 168 53 2 chr2 85612780 85613191 -167643392 - MSTB1 LTR MaLR 0 432 1 288 0 0 0 chr2 85613833 85613865 -167642718 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 1909 133 0 14 chr2 85613880 85614166 -167642417 - AluSx SINE Alu -30 282 1 313 398 0 8 chr2 85614672 85614800 -167641783 - MIR SINE MIR -63 145 19 282 273 0 0 chr2 85615553 85615608 -167640975 - MIR SINE MIR -135 73 19 2203 213 78 13 chr2 85615730 85616255 -167640328 - MER89 LTR ERV1 0 559 1 6410 250 55 19 chr2 85616255 85618499 -167638084 - MER89-int LTR ERV1 0 6801 4419 2096 226 18 59 chr2 85618499 85618994 -167637589 + MLT2B3 LTR ERVL 1 475 -79 553 149 0 0 chr2 85619355 85619449 -167637134 + MLT2B2 LTR ERVL 422 515 0 3077 274 40 21 chr2 85619482 85620698 -167635885 - MER89-int LTR ERV1 -2410 4391 3124 374 196 10 62 chr2 85620719 85620816 -167635767 + MLT2C2 LTR ERVL 1 92 -428 2074 153 40 6 chr2 85620816 85621168 -167635415 - THE1B LTR MaLR 0 364 1 9653 121 39 19 chr2 85621168 85622716 -167633867 - THE1B-int LTR MaLR 0 1580 2 657 179 65 8 chr2 85622748 85622871 -167633712 - THE1C LTR MaLR -245 130 1 * 786 193 76 144 chr2 85622871 85623279 -167633304 + MLT2C2 LTR ERVL 85 464 0 1374 248 64 94 chr2 85623345 85623878 -167632705 - MER89-int LTR ERV1 -3737 3064 2548 2859 254 31 19 chr2 85624178 85624948 -167631635 - MER89-int LTR ERV1 -4270 2531 1753 276 197 0 0 chr2 85624952 85625013 -167631570 - L1MA4 LINE L1 -3 6297 6237 301 274 20 20 chr2 85625021 85625123 -167631460 - MER89-int LTR ERV1 -5044 1757 1656 2646 238 39 39 chr2 85625165 85625939 -167630644 - MER89-int LTR ERV1 -5143 1658 885 1054 167 35 5 chr2 85626072 85626270 -167630313 - MER89 LTR ERV1 0 559 356 266 266 0 25 chr2 85627410 85627489 -167629094 - Tigger5 DNA MER2_type -5 2318 2242 * 491 211 22 0 chr2 85627469 85627559 -167629024 + Tigger5 DNA MER2_type 2230 2321 -2 1463 201 58 19 chr2 85627861 85628169 -167628414 + MLT1A1 LTR MaLR 1 320 -45 1326 178 114 69 chr2 85628171 85628503 -167628080 + MER7A DNA MER2_type 2 346 0 1799 174 8 34 chr2 85629129 85629485 -167627098 + MER7A DNA MER2_type 2 346 0 635 267 115 7 chr2 85630571 85630784 -167625799 + MIR SINE MIR 1 228 -34 2186 123 3 0 chr2 85630836 85631136 -167625447 + AluSg SINE Alu 2 302 -8 808 224 0 50 chr2 85631261 85631480 -167625103 - MER3 DNA MER1_type 0 209 2 371 295 20 7 chr2 85631555 85631704 -167624879 + (TA)n Simple_repeat Simple_repeat 1 151 0 24 67 0 0 chr2 85632794 85632839 -167623744 + AT_rich Low_complexity Low_complexity 1 45 0 1856 183 0 17 chr2 85634649 85634993 -167621590 + MER7A DNA MER2_type 2 337 -9 1316 197 17 41 chr2 85635638 85635933 -167620650 + AluJo SINE Alu 1 288 -24 462 275 99 63 chr2 85638075 85638235 -167618348 + MER34B LTR ERV1 183 336 -229 2134 138 0 3 chr2 85638235 85638539 -167618044 - AluSq SINE Alu -10 303 1 462 275 99 63 chr2 85638539 85638742 -167617841 + MER34B LTR ERV1 336 559 -6 213 94 0 0 chr2 85638962 85638994 -167617589 + (CAAAAA)n Simple_repeat Simple_repeat 2 33 0 1250 251 120 10 chr2 85639423 85639822 -167616761 + MER110 LTR ERV1 7 449 -42 189 0 0 0 chr2 85639822 85639843 -167616740 + (A)n Simple_repeat Simple_repeat 1 21 0 222 115 0 58 chr2 85640803 85640855 -167615728 + (CAAAAA)n Simple_repeat Simple_repeat 1 49 0 531 231 96 35 chr2 85640855 85641054 -167615529 - MLT1C LTR MaLR -163 304 94 430 275 96 68 chr2 85641822 85642207 -167614376 + MER110-int LTR ERV1 175 570 -4077 1417 303 82 92 chr2 85643237 85644479 -167612104 + MER110-int LTR ERV1 1652 2906 -1741 2181 109 7 0 chr2 85644479 85644782 -167611801 - AluSg SINE Alu -5 305 1 1417 303 82 92 chr2 85644782 85644819 -167611764 + MER110-int LTR ERV1 2906 2942 -1705 1595 154 73 39 chr2 85644819 85645175 -167611408 - THE1C LTR MaLR -4 371 4 1417 303 82 92 chr2 85645175 85646175 -167610408 + MER110-int LTR ERV1 2942 3908 -739 23 54 0 0 chr2 85646179 85646216 -167610367 + AT_rich Low_complexity Low_complexity 1 37 0 240 280 13 0 chr2 85646638 85646713 -167609870 - MLT1E LTR MaLR 0 593 518 * 531 233 175 7 chr2 85646709 85646913 -167609670 - MLT1E LTR MaLR -346 247 11 255 269 64 0 chr2 85647267 85647345 -167609238 + MER110 LTR ERV1 1 83 -408 2539 144 64 52 chr2 85647423 85647942 -167608641 + LTR1B LTR ERV1 1 525 -301 876 166 18 12 chr2 85647969 85648138 -167608445 + LTR1B LTR ERV1 657 826 0 1026 274 17 3 chr2 85648158 85648446 -167608137 + MER110 LTR ERV1 33 324 -167 2551 4 0 0 chr2 85648547 85648822 -167607761 - AluYa5 SINE Alu -20 291 17 563 205 20 46 chr2 85648880 85649031 -167607552 + MER110 LTR ERV1 337 483 -8 517 344 28 11 chr2 85649395 85649575 -167607008 + MER91A DNA MER1_type 14 196 0 24 0 0 0 chr2 85651214 85651238 -167605345 + AT_rich Low_complexity Low_complexity 1 24 0 581 290 27 16 chr2 85652218 85652401 -167604182 + MIR SINE MIR 68 252 -10 223 319 0 11 chr2 85652582 85652676 -167603907 + (TTA)n Simple_repeat Simple_repeat 3 95 0 601 294 140 5 chr2 85652678 85652892 -167603691 - MIR SINE MIR -2 260 18 392 273 65 7 chr2 85654294 85654433 -167602150 + MIR SINE MIR 116 262 0 327 356 34 0 chr2 85654564 85654682 -167601901 + MIR SINE MIR 21 142 -120 53 30 0 0 chr2 85654758 85654825 -167601758 + AT_rich Low_complexity Low_complexity 1 67 0 190 325 200 18 chr2 85655457 85655753 -167600830 - L2 LINE L2 -302 2970 2627 23 0 0 0 chr2 85656256 85656279 -167600304 + AT_rich Low_complexity Low_complexity 1 23 0 882 209 206 3 chr2 85656300 85656592 -167599991 - Charlie5 DNA MER1_type -20 2592 2242 560 171 60 0 chr2 85656594 85656711 -167599872 - Charlie5 DNA MER1_type -2484 128 5 251 154 123 31 chr2 85657314 85657379 -167599204 + L1MC5 LINE L1 7843 7913 -48 192 262 180 0 chr2 85657407 85657468 -167599115 - MIR SINE MIR -190 72 1 552 283 93 26 chr2 85657672 85657898 -167598685 - MIR SINE MIR 0 262 22 28 0 0 0 chr2 85659033 85659061 -167597522 + AT_rich Low_complexity Low_complexity 1 28 0 874 184 32 16 chr2 85659978 85660163 -167596420 + AluSx SINE Alu 2 189 -123 222 309 0 21 chr2 85660176 85660273 -167596310 + GA-rich Low_complexity Low_complexity 4 98 0 2331 218 43 16 chr2 85660765 85661256 -167595327 - MLT2B2 LTR ERVL -7 508 5 1738 212 110 70 chr2 85661261 85662133 -167594450 - LTR1B LTR ERV1 0 1020 1 306 73 0 0 chr2 85662906 85662947 -167593636 + (TG)n Simple_repeat Simple_repeat 2 42 0 4153 174 8 24 chr2 85663281 85664073 -167592510 + MER4E LTR ERV1 1 779 0 4007 89 11 0 chr2 85664651 85665199 -167591384 + MER41A LTR ERV1 1 554 0 1780 99 50 32 chr2 85665285 85665568 -167591015 + MER41A-int LTR ERV1 1 288 -7468 * 7268 103 30 3 chr2 85665566 85667248 -167589335 + MER41A-int LTR ERV1 4120 5910 -36 3999 98 4 0 chr2 85667264 85667816 -167588767 + MER41A LTR ERV1 1 554 0 23 54 0 0 chr2 85667987 85668024 -167588559 + AT_rich Low_complexity Low_complexity 1 37 0 184 385 0 0 chr2 85669013 85669078 -167587505 - L2 LINE L2 -5 3308 3244 2416 72 3 7 chr2 85669092 85669399 -167587184 - AluSp SINE Alu -7 306 1 265 277 8 0 chr2 85670265 85670384 -167586199 + (TA)n Simple_repeat Simple_repeat 1 120 0 22 0 0 0 chr2 85670566 85670588 -167585995 + AT_rich Low_complexity Low_complexity 1 22 0 435 190 0 25 chr2 85670951 85671072 -167585511 + CT-rich Low_complexity Low_complexity 4 121 0 338 240 111 53 chr2 85671111 85671282 -167585301 - L1MC/D LINE L1 -2355 5453 5273 2358 81 3 0 chr2 85671842 85672137 -167584446 - AluSp SINE Alu -17 296 1 21 57 0 0 chr2 85672367 85672402 -167584181 + AT_rich Low_complexity Low_complexity 1 35 0 294 29 0 0 chr2 85673246 85673281 -167583302 + (TG)n Simple_repeat Simple_repeat 1 35 0 27 0 0 0 chr2 85673753 85673780 -167582803 + AT_rich Low_complexity Low_complexity 1 27 0 24 32 0 0 chr2 85673828 85673859 -167582724 + AT_rich Low_complexity Low_complexity 1 31 0 2361 51 7 3 chr2 85673875 85674170 -167582413 - AluY SINE Alu -14 297 2 297 250 107 12 chr2 85674798 85674882 -167581701 - MER81 DNA DNA -22 92 1 316 267 37 30 chr2 85675018 85675153 -167581430 + PABL_A LTR ERV1 1 136 -524 755 211 53 26 chr2 85675252 85675442 -167581141 + PABL_B LTR ERV1 473 667 0 48 32 0 0 chr2 85675505 85675567 -167581016 + AT_rich Low_complexity Low_complexity 1 62 0 1673 157 141 21 chr2 85675986 85676368 -167580215 + MSTA LTR MaLR 1 428 0 1494 300 111 18 chr2 85677112 85677791 -167578792 - L2 LINE L2 -2010 1304 563 262 326 160 44 chr2 85677871 85678190 -167578393 + L2 LINE L2 2958 3313 0 1242 185 96 7 chr2 85679272 85679542 -167577041 + AluSq SINE Alu 6 299 -14 492 322 19 80 chr2 85679544 85679665 -167576918 + MIR SINE MIR 8 106 -156 2093 125 0 0 chr2 85679665 85679968 -167576615 + AluSx SINE Alu 3 305 -7 492 322 19 80 chr2 85679968 85680110 -167576473 + MIR SINE MIR 106 255 -7 417 298 106 14 chr2 85681357 85681649 -167574934 + L1ME3A LINE L1 4950 5268 -878 1788 265 120 32 chr2 85681679 85682468 -167574115 + L1ME3A LINE L1 5312 6170 0 363 281 100 19 chr2 85682575 85682735 -167573848 - L1M4 LINE L1 -801 5345 5173 316 326 12 0 chr2 85682857 85682943 -167573640 + MIR3 SINE MIR 71 157 -51 255 295 74 21 chr2 85682996 85683091 -167573492 + MIR SINE MIR 50 149 -113 237 83 0 0 chr2 85683108 85683144 -167573439 + (TG)n Simple_repeat Simple_repeat 1 36 0 21 36 0 0 chr2 85683267 85683295 -167573288 + AT_rich Low_complexity Low_complexity 1 28 0 30 77 0 0 chr2 85683315 85683380 -167573203 + AT_rich Low_complexity Low_complexity 1 65 0 1159 286 71 26 chr2 85683441 85684047 -167572536 - L1MC4 LINE L1 -130 7912 7280 1554 224 16 19 chr2 85684257 85684623 -167571960 + MLT1A1 LTR MaLR 1 365 0 2483 114 17 8 chr2 85684802 85685163 -167571420 + THE1B LTR MaLR 1 364 0 2143 104 7 3 chr2 85685742 85686041 -167570542 - AluSq SINE Alu -13 300 1 344 228 0 35 chr2 85686136 85686281 -167570302 + CT-rich Low_complexity Low_complexity 1 140 0 289 354 10 0 chr2 85686703 85686799 -167569784 - MIR3 SINE MIR -6 202 106 210 275 14 29 chr2 85687283 85687352 -167569231 + L2 LINE L2 3201 3268 -4 1051 320 87 0 chr2 85687898 85688288 -167568295 + LTR16A LTR ERVL 7 430 -20 217 358 58 29 chr2 85690179 85690316 -167566267 - MIR3 SINE MIR -18 190 50 21 0 0 0 chr2 85691013 85691034 -167565549 + AT_rich Low_complexity Low_complexity 1 21 0 1873 101 90 0 chr2 85691192 85691470 -167565113 - AluSx SINE Alu -9 303 1 1292 207 115 12 chr2 85692173 85692510 -167564073 + MLT1D LTR MaLR 132 539 -3 474 18 0 0 chr2 85692857 85692912 -167563671 + (CA)n Simple_repeat Simple_repeat 2 56 0 22 0 0 0 chr2 85693668 85693690 -167562893 + AT_rich Low_complexity Low_complexity 1 22 0 877 96 0 16 chr2 85693834 85693959 -167562624 + AluSg/x SINE Alu 172 294 -18 245 239 211 0 chr2 85694441 85694512 -167562071 - MIR3 SINE MIR -40 168 83 550 282 59 31 chr2 85696014 85696269 -167560314 - MIR SINE MIR 0 262 1 2330 58 24 0 chr2 85696703 85696994 -167559589 + AluY SINE Alu 1 298 -13 1192 167 50 21 chr2 85697634 85697915 -167558668 - L1MA4 LINE L1 0 6300 6012 315 0 0 0 chr2 85699651 85699686 -167556897 + (TG)n Simple_repeat Simple_repeat 1 35 0 27 92 0 0 chr2 85699688 85699764 -167556819 + AT_rich Low_complexity Low_complexity 1 76 0 200 260 0 13 chr2 85700379 85700456 -167556127 + CT-rich Low_complexity Low_complexity 1 76 0 21 36 0 0 chr2 85700714 85700742 -167555841 + AT_rich Low_complexity Low_complexity 1 28 0 631 192 24 0 chr2 85701142 85701267 -167555316 + Charlie4 DNA MER1_type 1818 1945 -16 239 225 62 88 chr2 85701644 85701724 -167554859 - L2 LINE L2 0 3313 3236 372 155 0 0 chr2 85702043 85702114 -167554469 + (TG)n Simple_repeat Simple_repeat 2 72 0 719 330 9 60 chr2 85702859 85703192 -167553391 + MLT1I LTR MaLR 93 408 -1 22 35 0 0 chr2 85703278 85703307 -167553276 + AT_rich Low_complexity Low_complexity 1 29 0 1699 213 22 90 chr2 85703605 85704141 -167552442 - MLT1D LTR MaLR -5 500 1 1280 237 94 25 chr2 85704940 85705378 -167551205 - MER110A LTR ERV1 0 468 1 798 133 15 0 chr2 85705816 85705951 -167550632 + L1PA8 LINE L1 6035 6171 -1 1049 190 0 0 chr2 85706533 85706712 -167549871 - AluJ SINE Alu -1 311 133 297 89 0 0 chr2 85706712 85706757 -167549826 + (CA)n Simple_repeat Simple_repeat 2 46 0 274 198 70 0 chr2 85706757 85706843 -167549740 + (TA)n Simple_repeat Simple_repeat 1 92 0 358 69 35 0 chr2 85706890 85706948 -167549635 + (TA)n Simple_repeat Simple_repeat 1 60 0 746 183 0 0 chr2 85706948 85707074 -167549509 - AluJ SINE Alu -186 126 1 676 240 7 14 chr2 85707106 85707252 -167549331 - MER5A DNA MER1_type -44 145 1 350 265 68 62 chr2 85708718 85708880 -167547703 - L1ME2 LINE L1 -10 6154 5992 * 3009 279 44 26 chr2 85708848 85710216 -167546367 - L1MEc LINE L1 -4512 1884 493 1631 99 0 96 chr2 85710219 85710511 -167546072 - AluSg SINE Alu 0 310 47 25 65 0 0 chr2 85710513 85710559 -167546024 + AT_rich Low_complexity Low_complexity 1 46 0 236 206 22 76 chr2 85710567 85710659 -167545924 - L1MA9 LINE L1 -67 6245 6159 1078 303 54 27 chr2 85710673 85711115 -167545468 - L1MEc LINE L1 -5905 491 38 246 207 17 17 chr2 85712339 85712397 -167544186 + GA-rich Low_complexity Low_complexity 1 58 0 1320 236 19 19 chr2 85714044 85714405 -167542178 + MLT1A2 LTR MaLR 1 361 -13 1909 187 50 27 chr2 85714821 85715259 -167541324 - L1MB1 LINE L1 -329 5839 5392 1021 237 29 4 chr2 85715255 85715500 -167541083 + L1 LINE L1 4807 5057 -1089 * 1342 141 70 0 chr2 85715492 85715734 -167540849 - L1MA8 LINE L1 -38 6253 5995 905 171 36 0 chr2 85715821 85716014 -167540569 + L1 LINE L1 5042 5241 -905 1875 194 9 0 chr2 85716025 85716375 -167540208 + MER47A DNA MER2_type 13 365 -1 532 147 7 63 chr2 85716390 85716533 -167540050 + L1M LINE L1 5254 5388 -780 222 358 53 0 chr2 85716850 85717001 -167539582 + L3 LINE CR1 1277 1435 -142 1938 200 52 48 chr2 85717365 85717925 -167538658 - MER68 LTR ERV1 0 562 1 782 247 98 102 chr2 85718638 85719156 -167537427 - MLT1E2 LTR MaLR -108 518 3 1394 96 5 5 chr2 85719948 85720136 -167536447 + AluY SINE Alu 1 188 -123 32 26 0 0 chr2 85720157 85720196 -167536387 + AT_rich Low_complexity Low_complexity 1 39 0 738 188 39 28 chr2 85720462 85720643 -167535940 + L1MC4 LINE L1 6731 6913 -1129 186 103 0 0 chr2 85720643 85720672 -167535911 + (TC)n Simple_repeat Simple_repeat 2 30 0 294 300 0 0 chr2 85720672 85720772 -167535811 + (TA)n Simple_repeat Simple_repeat 2 101 0 306 247 37 0 chr2 85720778 85720859 -167535724 - L1MCa LINE L1 -4348 2078 1995 699 130 20 7 chr2 85720859 85721005 -167535578 + GA-rich Low_complexity Low_complexity 2 149 0 1716 237 131 43 chr2 85721020 85721694 -167534889 + L1MC4 LINE L1 7140 7872 -170 705 296 95 17 chr2 85721905 85722433 -167534150 + L1ME2 LINE L1 1461 2029 -4511 1518 268 109 39 chr2 85722607 85723539 -167533044 + L1ME2 LINE L1 4624 5632 -908 1989 155 3 3 chr2 85723539 85723842 -167532741 - AluSx SINE Alu -8 304 2 1518 268 109 39 chr2 85723842 85723908 -167532675 + L1ME2 LINE L1 5632 5692 -848 1682 253 55 73 chr2 85723916 85724363 -167532220 + L1ME2 LINE L1 5761 6188 -370 2122 93 0 0 chr2 85724363 85724633 -167531950 - AluSp SINE Alu -26 287 18 1682 253 55 73 chr2 85724633 85724988 -167531595 + L1ME2 LINE L1 6188 6548 -10 237 178 58 3 chr2 85725566 85725618 -167530965 + MIR SINE MIR 37 87 -121 235 226 57 19 chr2 85726315 85726368 -167530215 + MER5A DNA MER1_type 7 61 -128 526 271 33 13 chr2 85726458 85726609 -167529974 - MER5B DNA MER1_type -2 176 23 474 218 0 0 chr2 85726687 85726774 -167529809 - MER5A DNA MER1_type -76 113 27 511 268 0 16 chr2 85727654 85727781 -167528802 + MER33 DNA MER1_type 11 135 -189 422 294 95 39 chr2 85727960 85728337 -167528246 + L1 LINE L1 3208 3613 -2533 2224 116 0 0 chr2 85728337 85728648 -167527935 - AluY SINE Alu 0 311 1 422 294 95 39 chr2 85728648 85728702 -167527881 + L1 LINE L1 3613 3663 -2483 921 251 63 50 chr2 85728805 85729247 -167527336 + L1MB7 LINE L1 5737 6184 0 680 285 58 31 chr2 85729243 85729730 -167526853 + L1MEc LINE L1 673 1172 -5224 * 941 205 59 21 chr2 85729734 85730022 -167526561 - L1M4 LINE L1 -1605 4541 4243 1009 230 6 82 chr2 85730029 85730360 -167526223 - AluJo SINE Alu 0 312 7 2754 245 40 27 chr2 85730365 85730532 -167526051 - L1M4 LINE L1 -1886 4260 4097 2370 77 0 0 chr2 85730532 85730830 -167525753 + AluY SINE Alu 1 298 -13 2754 245 40 27 chr2 85730830 85731543 -167525040 - L1M4 LINE L1 -2049 4097 3369 497 248 25 8 chr2 85731653 85731774 -167524809 - FLAM_C SINE Alu -15 128 6 654 253 35 25 chr2 85731778 85731980 -167524603 - L1M4 LINE L1 -1886 4260 4057 425 311 147 0 chr2 85732074 85732264 -167524319 + MIR SINE MIR 37 254 -8 21 36 0 0 chr2 85733092 85733120 -167523463 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 85733458 85733480 -167523103 + AT_rich Low_complexity Low_complexity 1 22 0 299 314 47 42 chr2 85733516 85733707 -167522876 + ERVL LTR ERVL 4904 5095 -669 201 147 0 0 chr2 85733767 85733801 -167522782 + (A)n Simple_repeat Simple_repeat 1 34 0 270 330 58 21 chr2 85733801 85733992 -167522591 + ERVL LTR ERVL 5175 5372 -392 5655 103 16 2 chr2 85735437 85736232 -167520351 - MER4D LTR ERV1 -66 806 1 21 0 0 0 chr2 85736304 85736325 -167520258 + AT_rich Low_complexity Low_complexity 1 21 0 1128 233 50 64 chr2 85736472 85736695 -167519888 - L1M4 LINE L1 -530 5648 5423 2098 127 3 13 chr2 85736695 85737003 -167519580 - AluSg SINE Alu -1 309 5 1128 233 50 64 chr2 85737003 85737016 -167519567 - L1M4 LINE L1 -755 5423 5411 2268 55 34 7 chr2 85737016 85737309 -167519274 - AluY SINE Alu -10 301 1 1128 233 50 64 chr2 85737309 85738739 -167517844 - L1M4 LINE L1 -767 5411 3883 13440 190 63 11 chr2 85738745 85739080 -167517503 - L1PB1 LINE L1 0 6867 6551 369 93 0 0 chr2 85739080 85739134 -167517449 + (TG)n Simple_repeat Simple_repeat 2 55 0 13440 190 63 11 chr2 85739134 85744707 -167511876 - L1PB1 LINE L1 -316 6551 634 1105 169 5 0 chr2 85744709 85744904 -167511679 - L1PB1 LINE L1 -6665 198 3 4843 150 59 3 chr2 85745274 85746136 -167510447 - Tigger3b DNA MER2_type 0 1231 322 21 0 0 0 chr2 85746272 85746293 -167510290 + GC_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 85748925 85748948 -167507635 + AT_rich Low_complexity Low_complexity 1 23 0 680 259 106 59 chr2 85749012 85749418 -167507165 - Charlie2a DNA MER1_type -654 2208 1784 635 284 6 38 chr2 85749425 85749608 -167506975 - MER5B DNA MER1_type 0 178 2 1548 207 0 10 chr2 85749625 85749934 -167506649 - AluJo SINE Alu -6 306 1 298 239 22 11 chr2 85749954 85750046 -167506537 - Charlie2a DNA MER1_type -1105 1757 1665 1760 146 0 0 chr2 85750186 85750461 -167506122 + AluY SINE Alu 35 309 -2 21 0 0 0 chr2 85750995 85751016 -167505567 + AT_rich Low_complexity Low_complexity 1 21 0 1652 122 0 0 chr2 85751156 85751394 -167505189 - AluSg1 SINE Alu -17 292 55 304 321 75 0 chr2 85751734 85751840 -167504743 - MIR SINE MIR -60 148 35 549 250 6 28 chr2 85752919 85753099 -167503484 - L1ME3A LINE L1 -236 5934 5759 253 304 98 25 chr2 85753106 85753392 -167503191 + L1MEc LINE L1 1409 1715 -4681 27 29 0 0 chr2 85753505 85753539 -167503044 + AT_rich Low_complexity Low_complexity 1 34 0 22 35 0 0 chr2 85753700 85753729 -167502854 + AT_rich Low_complexity Low_complexity 1 29 0 359 343 79 24 chr2 85753961 85754340 -167502243 + L1MEc LINE L1 3507 3906 -2309 1144 293 65 41 chr2 85754344 85754884 -167501699 - L1ME3A LINE L1 -15 6155 5603 315 349 35 30 chr2 85755124 85755356 -167501227 + HAL1b LINE L1 296 528 -820 874 287 36 14 chr2 85755357 85755775 -167500808 + L1M4 LINE L1 2303 2729 -3417 197 316 53 0 chr2 85755953 85756029 -167500554 + L3 LINE CR1 912 991 -586 959 325 142 26 chr2 85756228 85756835 -167499748 + L2 LINE L2 2203 2879 -435 928 220 40 0 chr2 85756849 85757049 -167499534 - L1PA16 LINE L1 -16 6150 5943 484 321 222 14 chr2 85757055 85757407 -167499176 + L2 LINE L2 2889 3313 0 298 271 57 14 chr2 85757732 85757802 -167498781 - L2 LINE L2 -56 3216 3144 1815 164 43 20 chr2 85757973 85758369 -167498214 + L1MA8 LINE L1 5883 6287 -4 28 0 0 0 chr2 85758515 85758543 -167498040 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 85759133 85759161 -167497422 + AT_rich Low_complexity Low_complexity 1 28 0 3974 224 29 4 chr2 85759700 85761318 -167495265 - L1MB2 LINE L1 -2 6169 4517 739 310 81 8 chr2 85761542 85761803 -167494780 - MLT1E1 LTR MaLR -24 630 351 3682 125 45 70 chr2 85761803 85762545 -167494038 - L1MA4A LINE L1 -314 5989 5267 258 286 14 14 chr2 85763137 85763207 -167493376 - MER5A DNA MER1_type -79 110 41 284 292 236 7 chr2 85763237 85763381 -167493202 + MER5B DNA MER1_type 1 177 -1 380 274 40 75 chr2 85764252 85764358 -167492225 - MIR SINE MIR -30 232 124 1111 51 34 11 chr2 85764358 85764533 -167492050 + (TTTC)n Simple_repeat Simple_repeat 1 179 0 606 28 0 0 chr2 85764533 85764605 -167491978 + (TTCC)n Simple_repeat Simple_repeat 3 74 0 380 274 40 75 chr2 85764605 85764723 -167491860 - MIR SINE MIR -136 126 15 2298 92 0 0 chr2 85764863 85765157 -167491426 - AluSg SINE Alu -16 294 1 480 301 42 69 chr2 85765560 85765616 -167490967 - MIR SINE MIR -6 256 200 1911 100 4 8 chr2 85765616 85765876 -167490707 + AluSc SINE Alu 35 293 -16 480 301 42 69 chr2 85765876 85766081 -167490502 - MIR SINE MIR -62 200 2 389 77 0 0 chr2 85766273 85766325 -167490258 - L1M1 LINE L1 -601 5702 5651 22 70 0 0 chr2 85766523 85766566 -167490017 + AT_rich Low_complexity Low_complexity 1 43 0 369 290 0 32 chr2 85766610 85766734 -167489849 + MLT1I LTR MaLR 113 232 -177 855 85 31 24 chr2 85766885 85767436 -167489147 + (TA)n Simple_repeat Simple_repeat 1 555 0 300 258 32 19 chr2 85767568 85767723 -167488860 + L1M4 LINE L1 2806 2962 -3184 * 423 260 16 0 chr2 85767712 85767835 -167488748 + L1M4 LINE L1 4643 4767 -1379 528 236 47 7 chr2 85767881 85768029 -167488554 + L1ME1 LINE L1 6012 6165 -1 180 176 0 0 chr2 85768264 85768298 -167488285 + (TA)n Simple_repeat Simple_repeat 2 35 0 412 359 119 9 chr2 85768417 85768737 -167487846 - MLT1K LTR MaLR -10 578 224 387 264 124 0 chr2 85768757 85768878 -167487705 + MER96 DNA MER1_type? 2 137 -38 2334 71 0 0 chr2 85769604 85769899 -167486684 - AluY SINE Alu -16 295 1 196 107 0 0 chr2 85769957 85769985 -167486598 + L3 LINE CR1 645 672 -905 385 287 61 9 chr2 85770013 85770128 -167486455 - MIR SINE MIR -21 241 121 729 347 126 21 chr2 85770128 85770802 -167485781 + L3 LINE CR1 759 1503 -74 389 365 23 28 chr2 85773506 85773741 -167482842 + MIR SINE MIR 21 252 -10 22 70 0 0 chr2 85774847 85774890 -167481693 + AT_rich Low_complexity Low_complexity 1 43 0 3751 57 12 0 chr2 85775367 85775862 -167480721 - L1PA5 LINE L1 -3630 2516 2016 21800 60 2 1 chr2 85775862 85779504 -167477079 + L1PA5 LINE L1 2521 6154 0 216 0 0 0 chr2 85779690 85779714 -167476869 + (TA)n Simple_repeat Simple_repeat 2 25 0 983 243 72 132 chr2 85781969 85782524 -167474059 - MLT1E LTR MaLR -14 579 58 418 210 49 0 chr2 85782702 85782864 -167473719 + (TA)n Simple_repeat Simple_repeat 1 170 0 271 288 24 72 chr2 85783185 85783310 -167473273 - MIR SINE MIR -65 143 25 2055 183 19 3 chr2 85783544 85783916 -167472667 - MER83B LTR ERV1 0 378 1 2086 175 9 0 chr2 85783919 85784257 -167472326 - MER83B-int LTR ERV1 -16 4864 4524 970 196 21 76 chr2 85784333 85784631 -167471952 - MER83B-int LTR ERV1 -2870 3728 3473 1715 184 10 0 chr2 85784631 85784919 -167471664 - AluSx SINE Alu -21 291 1 970 196 21 76 chr2 85784919 85785075 -167471508 - MER83B-int LTR ERV1 -3125 3473 3310 * 2713 142 11 2 chr2 85785071 85785537 -167471046 - MER83B-int LTR ERV1 -1185 3695 3226 14054 169 25 24 chr2 85785558 85789259 -167467324 - L1PA11 LINE L1 -12 7600 3882 61 15 0 0 chr2 85789259 85789327 -167467256 + AT_rich Low_complexity Low_complexity 1 68 0 5903 234 25 40 chr2 85789334 85792178 -167464405 - L1PA11 LINE L1 -3692 3892 1 5628 124 48 23 chr2 85792201 85793254 -167463329 - MER83B-int LTR ERV1 -1640 3240 2162 22 35 0 0 chr2 85893848 85893877 -167362706 + AT_rich Low_complexity Low_complexity 1 29 0 812 177 11 43 chr2 85894892 85895078 -167361505 - LTR9 LTR ERV1 -432 180 1 1916 231 17 13 chr2 85895078 85895546 -167361037 - L1 LINE L1 -2034 5531 5062 1006 81 0 15 chr2 85895557 85895713 -167360870 - AluY SINE Alu 0 302 149 3270 254 51 34 chr2 85895717 85896870 -167359713 - L1 LINE L1 -2523 5042 3862 647 256 57 35 chr2 85896870 85897100 -167359483 - MER46A DNA MER2_type -1 235 1 3270 254 51 34 chr2 85897100 85897274 -167359309 - L1 LINE L1 -3703 3862 3692 2646 80 95 5 chr2 85897306 85897717 -167358866 - LTR7 LTR ERV1 -2 448 1 195 139 0 0 chr2 85897746 85897782 -167358801 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 1706 149 61 0 chr2 85897783 85898044 -167358539 - AluSx SINE Alu -35 277 1 248 171 146 0 chr2 85898045 85898127 -167358456 - L1MA4 LINE L1 -46 6254 6161 * 2463 282 62 34 chr2 85898096 85899699 -167356884 - L1 LINE L1 -3858 3707 2060 3700 138 21 8 chr2 85899702 85900310 -167356273 - L1PA15 LINE L1 -4 6161 5546 270 0 0 0 chr2 85900320 85900350 -167356233 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 1511 160 4 0 chr2 85900350 85900600 -167355983 - AluSg SINE Alu -26 284 34 182 359 0 0 chr2 85900716 85900769 -167355814 + MIR SINE MIR 200 252 -10 865 261 59 20 chr2 85900782 85901088 -167355495 + L1M4 LINE L1 3586 3903 -2243 341 327 76 63 chr2 85901811 85902126 -167354457 + MLT1I LTR MaLR 83 401 -8 188 143 24 0 chr2 85902232 85902274 -167354309 + A-rich Low_complexity Low_complexity 1 43 0 191 346 108 8 chr2 85902356 85902486 -167354097 - L2 LINE L2 -24 3289 3147 193 307 139 10 chr2 85903113 85903214 -167353369 + MIR SINE MIR 54 167 -95 3523 182 35 21 chr2 85903764 85904488 -167352095 - MER50 LTR ERV1 0 734 1 23 0 0 0 chr2 85904591 85904614 -167351969 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 85905427 85905448 -167351135 + AT_rich Low_complexity Low_complexity 1 21 0 600 286 42 9 chr2 85906110 85906327 -167350256 + HERVL LTR ERVL 1 224 -5430 2139 236 31 6 chr2 85906364 85907082 -167349501 + HERVL LTR ERVL 373 1181 -4583 22 35 0 0 chr2 85907391 85907420 -167349163 + AT_rich Low_complexity Low_complexity 1 29 0 573 290 66 99 chr2 85907861 85908706 -167347877 - L1MEd LINE L1 -919 1571 668 276 294 71 57 chr2 85908991 85909273 -167347310 - L1MEd LINE L1 -5723 396 111 269 276 20 0 chr2 85909316 85909414 -167347169 + L1ME LINE L1 5709 5808 -313 754 242 0 0 chr2 85909767 85909949 -167346634 + AluJb SINE Alu 133 314 0 36 70 0 0 chr2 85909978 85910049 -167346534 + AT_rich Low_complexity Low_complexity 1 71 0 21 0 0 0 chr2 85910305 85910326 -167346257 + AT_rich Low_complexity Low_complexity 1 21 0 287 327 0 0 chr2 85910358 85910459 -167346124 - HAL1b LINE L1 -696 652 552 198 316 89 0 chr2 85910595 85910674 -167345909 - L2 LINE L2 -1 3312 3227 1725 185 46 9 chr2 85912184 85912508 -167344075 - MER2 DNA MER2_type -1 344 9 262 402 71 0 chr2 85912788 85912957 -167343626 - MIR SINE MIR -57 205 25 25 31 0 0 chr2 85913336 85913368 -167343215 + AT_rich Low_complexity Low_complexity 1 32 0 853 246 5 20 chr2 85914057 85914256 -167342327 - LTR40a LTR ERVL 0 519 324 213 94 0 0 chr2 85914810 85914842 -167341741 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 1999 158 3 0 chr2 85916635 85916939 -167339644 + AluSx SINE Alu 1 305 -7 23 33 0 0 chr2 85917003 85917033 -167339550 + AT_rich Low_complexity Low_complexity 1 30 0 356 186 0 0 chr2 85917631 85917690 -167338893 - MER5A DNA MER1_type -3 186 128 2115 110 3 0 chr2 85917718 85918009 -167338574 - AluSc SINE Alu -17 292 1 2511 159 5 0 chr2 85918067 85918475 -167338108 + LTR1B LTR ERV1 417 826 0 453 302 96 31 chr2 85918563 85919212 -167337371 - L1M4 LINE L1 -2578 3568 2878 36 53 0 0 chr2 85919354 85919411 -167337172 + AT_rich Low_complexity Low_complexity 1 57 0 182 289 0 19 chr2 85920361 85920413 -167336170 + L3b LINE CR1 1232 1282 -301 275 221 46 53 chr2 85920622 85920753 -167335830 - L1MD3 LINE L1 -969 7026 6897 197 33 33 0 chr2 85920776 85920806 -167335777 + (TA)n Simple_repeat Simple_repeat 2 32 0 2321 91 52 3 chr2 85920864 85921227 -167335356 + L1MA1 LINE L1 5922 6302 0 3220 211 40 42 chr2 85921253 85921961 -167334622 - L1MC3 LINE L1 -25 8178 7471 6203 94 8 18 chr2 85921961 85922604 -167333979 - L1PA8A LINE L1 0 6131 5483 2084 131 0 10 chr2 85922604 85922916 -167333667 - AluSg SINE Alu -1 309 1 6203 94 8 18 chr2 85922916 85923627 -167332956 - L1PA8A LINE L1 -648 5483 4787 3220 211 40 42 chr2 85923627 85923801 -167332782 - L1MC3 LINE L1 -732 7471 7298 * 4845 256 60 22 chr2 85923797 85925708 -167330875 - L1MC3 LINE L1 -743 5821 4741 475 84 0 60 chr2 85925708 85925791 -167330792 - MADE1 DNA Mariner 0 80 3 4845 256 60 22 chr2 85925791 85927131 -167329452 - L1MC3 LINE L1 -1823 4741 3453 951 169 29 14 chr2 85927160 85927367 -167329216 - L1MA9 LINE L1 0 6312 6103 663 279 25 0 chr2 85927370 85927528 -167329055 + Tigger7 DNA MER2_type 10 171 -2316 1553 134 4 8 chr2 85927529 85927790 -167328793 + Tigger7 DNA MER2_type 2309 2568 -19 4158 190 31 12 chr2 85927790 85929081 -167327502 - L1MA9 LINE L1 -206 6106 4776 1096 164 62 53 chr2 85929081 85929306 -167327277 - MER30 DNA MER1_type 0 230 4 4158 190 31 12 chr2 85929306 85929694 -167326889 - L1MA9 LINE L1 -1536 4776 4397 558 171 108 16 chr2 85929697 85929826 -167326757 - L1MC3 LINE L1 -4942 1622 1482 22 35 0 0 chr2 85929865 85929894 -167326689 + AT_rich Low_complexity Low_complexity 1 29 0 307 215 35 35 chr2 85929896 85930068 -167326515 + (TATAA)n Simple_repeat Simple_repeat 5 176 0 2217 237 63 130 chr2 85930108 85931402 -167325181 - L1MC3 LINE L1 -5201 1363 24 25 31 0 0 chr2 85931808 85931840 -167324743 + AT_rich Low_complexity Low_complexity 1 32 0 489 347 27 73 chr2 85932084 85932650 -167323933 + L2 LINE L2 2699 3235 -78 1652 232 40 44 chr2 85932864 85933395 -167323188 - LTR27 LTR ERV1 0 501 3 398 358 9 17 chr2 85933395 85933627 -167322956 + L2 LINE L2 118 347 -2967 1581 211 57 3 chr2 85933652 85934003 -167322580 - L1MB1 LINE L1 -138 6030 5661 250 354 21 0 chr2 85934009 85934105 -167322478 + L2 LINE L2 352 449 -2865 5950 141 54 73 chr2 85934124 85935298 -167321285 - MER4A-int LTR ERV1 -986 5612 4417 3997 47 0 0 chr2 85935298 85935788 -167320795 - L1PA5 LINE L1 -7 6147 5658 778 10 0 0 chr2 85935789 85935885 -167320698 + L1P LINE L1 2362 2457 -3689 5950 141 54 73 chr2 85935885 85936212 -167320371 - MER4A-int LTR ERV1 -2180 4418 3931 1806 77 98 31 chr2 85936218 85936505 -167320078 - MER4A-int LTR ERV1 -6292 306 1 1640 156 3 74 chr2 85936508 85936880 -167319703 - MER4A LTR ERV1 0 664 261 516 111 89 0 chr2 85936880 85936970 -167319613 - MER4A LTR ERV1 -566 98 1 376 325 0 39 chr2 85937955 85938109 -167318474 - MIR SINE MIR -70 192 45 196 339 70 72 chr2 85938192 85938579 -167318004 - L2 LINE L2 -338 2976 2591 2271 156 26 47 chr2 85939064 85939659 -167316924 - MER4E LTR ERV1 -2 764 1 25 75 0 0 chr2 85940858 85940911 -167315672 + AT_rich Low_complexity Low_complexity 1 53 0 249 331 107 6 chr2 85941661 85941830 -167314753 + MIR SINE MIR 73 258 -4 197 325 113 0 chr2 85941853 85941933 -167314650 + MIR SINE MIR 5 93 -169 22 0 0 0 chr2 85942655 85942677 -167313906 + AT_rich Low_complexity Low_complexity 1 22 0 1915 123 3 11 chr2 85942683 85942967 -167313616 + AluSx SINE Alu 1 282 -30 302 0 26 0 chr2 85942972 85943010 -167313573 + (TAA)n Simple_repeat Simple_repeat 2 40 0 241 236 0 0 chr2 85943141 85943196 -167313387 - MIR SINE MIR -62 200 146 1125 271 83 87 chr2 85943200 85943742 -167312841 - MLT1E LTR MaLR 0 593 3 2098 160 13 16 chr2 85944615 85944991 -167311592 + THE1C LTR MaLR 1 375 0 9073 119 43 49 chr2 85944991 85946581 -167310002 + THE1C-int LTR MaLR 1 1580 0 268 89 0 0 chr2 85946718 85946763 -167309820 + THE1C LTR MaLR 132 176 -199 * 1655 173 10 3 chr2 85946760 85947060 -167309523 + THE1C LTR MaLR 72 373 -2 21 0 0 0 chr2 85947932 85947953 -167308630 + AT_rich Low_complexity Low_complexity 1 21 0 36 19 0 19 chr2 85948902 85948923 -167307660 + AT_rich Low_complexity Low_complexity 1 21 -32 2154 101 0 7 chr2 85948923 85949220 -167307363 + AluSq SINE Alu 1 295 -18 36 19 0 19 chr2 85949220 85949252 -167307331 + AT_rich Low_complexity Low_complexity 21 53 0 1100 216 87 38 chr2 85949874 85950161 -167306422 - AluJb SINE Alu -1 301 1 22 0 0 0 chr2 85950313 85950335 -167306248 + AT_rich Low_complexity Low_complexity 1 22 0 490 163 143 0 chr2 85951159 85951257 -167305326 - MLT2A2 LTR ERVL -8 445 334 315 254 7 92 chr2 85952041 85952183 -167304400 - L1MC4 LINE L1 -17 8025 7896 312 316 53 40 chr2 85952242 85952394 -167304189 + L1ME LINE L1 5562 5715 -406 2433 135 3 8 chr2 85952572 85952949 -167303634 + THE1C LTR MaLR 1 375 0 4741 199 16 14 chr2 85954554 85955472 -167301111 + L1M1 LINE L1 106 1025 -6540 4892 105 25 3 chr2 85955472 85956225 -167300358 + L1MA2 LINE L1 5535 6304 0 26 64 0 0 chr2 85956233 85956280 -167300303 + AT_rich Low_complexity Low_complexity 1 47 0 425 242 15 30 chr2 85956654 85956786 -167299797 + AluJo SINE Alu 9 138 -174 1069 240 122 28 chr2 85956851 85957163 -167299420 + MER110A LTR ERV1 2 366 -102 1108 167 22 37 chr2 85957163 85957433 -167299150 + L1MA9 LINE L1 6047 6312 0 1069 240 122 28 chr2 85957433 85957545 -167299038 + MER110A LTR ERV1 366 466 -2 23 0 0 0 chr2 85957692 85957715 -167298868 + AT_rich Low_complexity Low_complexity 1 23 0 1579 217 68 44 chr2 85958506 85959008 -167297575 - L1MB7 LINE L1 -9 6175 5662 574 210 159 81 chr2 85959026 85959230 -167297353 - L1ME3A LINE L1 -2 6168 5927 2039 131 3 6 chr2 85959230 85959544 -167297039 - AluSp SINE Alu 0 313 1 574 210 159 81 chr2 85959544 85959672 -167296911 - L1ME3A LINE L1 -243 5927 5810 627 280 19 0 chr2 85959678 85959835 -167296748 + Charlie1 DNA MER1_type 1 160 -2601 634 235 0 0 chr2 85959865 85960001 -167296582 + Charlie1 DNA MER1_type 2622 2757 -4 602 226 59 39 chr2 85960010 85960191 -167296392 - L1ME3A LINE L1 -375 5795 5607 2069 106 0 11 chr2 85960191 85960508 -167296075 - AluSg SINE Alu 0 314 1 602 226 59 39 chr2 85960508 85960529 -167296054 - L1ME3A LINE L1 -563 5607 5588 493 200 45 0 chr2 85960571 85960683 -167295900 + MLT1A1 LTR MaLR 210 315 -50 619 256 52 14 chr2 85960687 85960898 -167295685 - L1ME3A LINE L1 -579 5585 5367 2719 185 31 9 chr2 85960930 85962404 -167294179 - L1MA9 LINE L1 0 6312 4768 443 164 31 0 chr2 85962413 85962513 -167294070 - L1MA9 LINE L1 -1821 4325 4217 458 140 90 0 chr2 85962535 85962635 -167293948 - L1MA9 LINE L1 -1821 4325 4217 * 2533 211 39 2 chr2 85962632 85963268 -167293315 - L1 LINE L1 -1379 4767 4108 600 178 83 25 chr2 85963268 85963425 -167293158 - LTR9 LTR ERV1 -1 611 446 443 194 0 65 chr2 85963441 85963549 -167293034 - LTR9 LTR ERV1 -315 297 197 3459 203 6 13 chr2 85963867 85964707 -167291876 - L1P4 LINE L1 -694 5471 4634 368 379 16 8 chr2 85964722 85964970 -167291613 - L1M2a LINE L1 -5178 1990 1741 329 197 127 0 chr2 85965078 85965149 -167291434 + pTR5 LTR ERV1 741 820 -1618 1293 81 212 242 chr2 85965164 85965631 -167290952 + LTR12 LTR ERV1 129 581 -133 2137 78 0 0 chr2 85966618 85966887 -167289696 - AluY SINE Alu -4 307 39 983 258 73 20 chr2 85966913 85967254 -167289329 - MLT1A1 LTR MaLR 0 365 7 22 0 0 0 chr2 85967274 85967296 -167289287 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 85968108 85968129 -167288454 + AT_rich Low_complexity Low_complexity 1 21 0 261 98 0 0 chr2 85969627 85969668 -167286915 + (GA)n Simple_repeat Simple_repeat 2 42 0 228 360 13 52 chr2 85970206 85970359 -167286224 - MIR SINE MIR -19 243 97 2315 167 21 14 chr2 85970664 85971083 -167285500 - MSTB LTR MaLR -4 422 1 206 266 13 13 chr2 85971396 85971475 -167285108 + (TA)n Simple_repeat Simple_repeat 1 79 0 263 331 55 44 chr2 85971781 85971962 -167284621 - MIR SINE MIR -31 231 49 198 103 0 0 chr2 85973267 85973296 -167283287 + (CA)n Simple_repeat Simple_repeat 2 30 0 316 342 9 18 chr2 85974374 85974488 -167282095 + L2 LINE L2 3146 3258 -14 378 121 0 0 chr2 85975303 85975369 -167281214 + (TC)n Simple_repeat Simple_repeat 2 67 0 216 111 0 0 chr2 85975369 85975405 -167281178 + (CA)n Simple_repeat Simple_repeat 1 36 0 2102 89 7 0 chr2 85976242 85976552 -167280031 - AluSp SINE Alu 0 312 1 236 273 91 73 chr2 85976893 85977058 -167279525 - MIR SINE MIR -42 220 53 2437 63 0 0 chr2 85978516 85978817 -167277766 + AluY SINE Alu 1 301 -10 21 36 0 0 chr2 85979529 85979557 -167277026 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 85979822 85979850 -167276733 + AT_rich Low_complexity Low_complexity 1 28 0 2281 151 32 41 chr2 85979938 85980375 -167276208 - Tigger2a DNA MER2_type 0 434 2 318 115 0 0 chr2 85983056 85983108 -167273475 + (CA)n Simple_repeat Simple_repeat 2 53 0 1240 170 137 37 chr2 85983130 85983400 -167273183 - AluJo SINE Alu -15 297 1 280 267 76 29 chr2 85983863 85983968 -167272615 - L2 LINE L2 -9 3304 3195 434 219 28 22 chr2 85984867 85985045 -167271538 + (TA)n Simple_repeat Simple_repeat 2 180 0 1689 262 53 50 chr2 85986666 85987265 -167269318 + MLT1E2 LTR MaLR 26 626 0 2020 118 10 35 chr2 85989626 85989940 -167266643 + AluSg SINE Alu 3 308 -2 502 137 0 20 chr2 85989950 85990052 -167266531 + (TA)n Simple_repeat Simple_repeat 2 101 0 364 314 99 99 chr2 85990052 85990335 -167266248 + MLT1I LTR MaLR 127 409 0 829 196 29 29 chr2 85990395 85990599 -167265984 - MER3 DNA MER1_type -1 208 5 267 313 39 47 chr2 85991469 85991597 -167264986 - L2 LINE L2 0 3313 3187 30 0 0 0 chr2 85992636 85992666 -167263917 + AT_rich Low_complexity Low_complexity 1 30 0 25 59 0 29 chr2 85993031 85993066 -167263517 + AT_rich Low_complexity Low_complexity 1 35 -31 1960 147 10 0 chr2 85993066 85993366 -167263217 + AluSq SINE Alu 1 303 -10 25 59 0 29 chr2 85993366 85993398 -167263185 + AT_rich Low_complexity Low_complexity 35 66 0 4180 212 76 4 chr2 85994696 85995376 -167261207 - L1 LINE L1 -1157 4989 4212 420 20 0 0 chr2 85995376 85995425 -167261158 + (TG)n Simple_repeat Simple_repeat 2 50 0 4180 212 76 4 chr2 85995425 85995747 -167260836 - L1 LINE L1 -1934 4212 3915 1630 166 23 15 chr2 85995732 85996254 -167260329 + L1MB1 LINE L1 5471 6164 -4 * 2136 162 29 7 chr2 85996522 85996942 -167259641 + L1MA5 LINE L1 5872 6300 0 38 68 0 0 chr2 85997190 85997263 -167259320 + AT_rich Low_complexity Low_complexity 1 73 0 228 111 0 0 chr2 85997412 85997448 -167259135 + (CA)n Simple_repeat Simple_repeat 2 37 0 2086 289 86 24 chr2 85997451 85998814 -167257769 - L1MC4 LINE L1 -92 7716 6336 23 54 0 0 chr2 85998929 85998966 -167257617 + AT_rich Low_complexity Low_complexity 1 37 0 360 325 16 36 chr2 85999190 85999384 -167257199 - L1MC4 LINE L1 -1911 5897 5708 2112 121 0 3 chr2 85999940 86000237 -167256346 + AluSg SINE Alu 1 296 -14 712 309 31 95 chr2 86000464 86001190 -167255393 + L2 LINE L2 2606 3275 -38 478 62 71 0 chr2 86001558 86001671 -167254912 + (TA)n Simple_repeat Simple_repeat 1 121 0 253 327 51 26 chr2 86002375 86002531 -167254052 - MLT1J1 LTR MaLR -264 182 23 1673 177 7 17 chr2 86003324 86003612 -167252971 + MER1B DNA MER1_type 55 339 0 645 268 96 5 chr2 86003616 86003825 -167252758 + L1ME1 LINE L1 5934 6161 -5 221 253 27 13 chr2 86004099 86004174 -167252409 + (TCTA)n Simple_repeat Simple_repeat 2 77 0 192 77 0 0 chr2 86004861 86004887 -167251696 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 22 70 0 0 chr2 86005321 86005364 -167251219 + AT_rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr2 86005876 86005898 -167250685 + AT_rich Low_complexity Low_complexity 1 22 0 2092 133 16 39 chr2 86006072 86006456 -167250127 + THE1C LTR MaLR 1 375 0 396 40 0 0 chr2 86006619 86006669 -167249914 + (TG)n Simple_repeat Simple_repeat 2 51 0 249 170 21 0 chr2 86006977 86007024 -167249559 + L2 LINE L2 3256 3303 -10 280 287 70 16 chr2 86007566 86007695 -167248888 + MERVL LTR ERVL 2093 2228 -3257 2277 309 87 33 chr2 86007720 86008125 -167248458 + L1MEc LINE L1 20 402 -5994 8460 115 11 22 chr2 86008125 86008191 -167248392 + HSMAR1 DNA Mariner 2 67 -1220 1983 128 7 0 chr2 86008191 86008479 -167248104 - AluSg SINE Alu -20 290 1 8460 115 11 22 chr2 86008479 86009711 -167246872 + HSMAR1 DNA Mariner 67 1287 0 2277 309 87 33 chr2 86009711 86010993 -167245590 + L1MEc LINE L1 402 1803 -4593 333 47 0 0 chr2 86010993 86011036 -167245547 + (TG)n Simple_repeat Simple_repeat 1 43 0 2277 309 87 33 chr2 86011036 86011067 -167245516 + L1MEc LINE L1 1803 1831 -4565 700 259 121 30 chr2 86011043 86011514 -167245069 + L1MEc LINE L1 2740 3253 -2962 * 13572 188 29 28 chr2 86011517 86014909 -167241674 + L1MA2 LINE L1 3356 6749 -816 5436 91 8 1 chr2 86014955 86015724 -167240859 - L1PA8A LINE L1 -28 6103 5330 2672 96 21 0 chr2 86015723 86016109 -167240474 + L1MA2 LINE L1 6735 7128 -595 * 2959 124 31 2 chr2 86016114 86016598 -167239985 + L1MA2 LINE L1 7226 7723 0 345 313 109 0 chr2 86016699 86016983 -167239600 + L1MEc LINE L1 3325 3639 -2576 3641 105 20 7 chr2 86016984 86017526 -167239057 + L1PA14 LINE L1 5536 6084 -77 267 175 48 29 chr2 86018000 86018103 -167238480 + (TTATA)n Simple_repeat Simple_repeat 5 109 0 23 33 0 0 chr2 86018156 86018186 -167238397 + AT_rich Low_complexity Low_complexity 1 30 0 4435 117 12 3 chr2 86018321 86019007 -167237576 - L1PA14 LINE L1 -6 6155 5464 1443 155 2 12 chr2 86019007 86019241 -167237342 + LTR39 LTR ERV1 562 783 0 295 175 63 0 chr2 86019309 86019372 -167237211 - L1ME LINE L1 -529 5592 5526 28 0 0 0 chr2 86019633 86019661 -167236922 + AT_rich Low_complexity Low_complexity 1 28 0 29 94 0 0 chr2 86020724 86020809 -167235774 + AT_rich Low_complexity Low_complexity 1 85 0 23 54 0 0 chr2 86021362 86021399 -167235184 + AT_rich Low_complexity Low_complexity 1 37 0 263 284 37 0 chr2 86021438 86021451 -167235132 - L1MA4A LINE L1 -8 6295 6283 837 298 0 0 chr2 86021451 86021669 -167234914 - L1PB4 LINE L1 -7 6149 5932 333 299 60 42 chr2 86022087 86022254 -167234329 + MIR SINE MIR 81 250 -12 2331 58 7 0 chr2 86022388 86022679 -167233904 + AluY SINE Alu 1 293 -18 1112 249 18 70 chr2 86022721 86023119 -167233464 + MLT1D LTR MaLR 116 492 -13 231 36 0 0 chr2 86023771 86023799 -167232784 + (CA)n Simple_repeat Simple_repeat 1 28 0 * 261 0 0 0 chr2 86023798 86023827 -167232756 + (GA)n Simple_repeat Simple_repeat 2 30 0 180 365 69 46 chr2 86024234 86024494 -167232089 + L2 LINE L2 2561 2826 -488 25 31 0 0 chr2 86024803 86024835 -167231748 + AT_rich Low_complexity Low_complexity 1 32 0 319 314 80 87 chr2 86025038 86025251 -167231332 - L3 LINE CR1 -15 1562 1352 1738 115 115 4 chr2 86025251 86025520 -167231063 - AluSx SINE Alu -13 299 1 319 314 80 87 chr2 86025520 86025707 -167230876 - L3 LINE CR1 -225 1352 1165 243 0 0 0 chr2 86027345 86027372 -167229211 + (CA)n Simple_repeat Simple_repeat 2 28 0 681 178 77 18 chr2 86027428 86027597 -167228986 + L1MA7 LINE L1 6110 6288 -3 2344 45 17 0 chr2 86027896 86028187 -167228396 + AluY SINE Alu 1 296 -15 251 265 147 24 chr2 86028811 86028981 -167227602 - L1M2 LINE L1 -786 5526 5336 28 0 0 0 chr2 86029224 86029252 -167227331 + AT_rich Low_complexity Low_complexity 1 28 0 337 291 75 48 chr2 86029293 86029520 -167227063 - L1M4 LINE L1 -2843 3303 3071 22 56 0 0 chr2 86030043 86030079 -167226504 + AT_rich Low_complexity Low_complexity 1 36 0 44 84 0 0 chr2 86030236 86030343 -167226240 + AT_rich Low_complexity Low_complexity 1 107 0 1395 209 3 60 chr2 86030440 86030787 -167225796 - AluJo SINE Alu 0 312 1 1373 231 40 3 chr2 86030993 86031314 -167225269 + MER97b DNA MER1_type? 269 601 -452 307 342 54 20 chr2 86031868 86032017 -167224566 - ERVL LTR ERVL -3502 2262 2109 558 216 85 103 chr2 86032038 86032123 -167224460 - MER34B LTR ERV1 -12 530 445 181 71 0 48 chr2 86032123 86032165 -167224418 + (TTTTA)n Simple_repeat Simple_repeat 1 40 0 558 216 85 103 chr2 86032165 86032301 -167224282 - MER34B LTR ERV1 -97 445 308 1075 195 49 113 chr2 86032301 86032691 -167223892 + MLT1A1 LTR MaLR 1 365 0 558 216 85 103 chr2 86032691 86032950 -167223633 - MER34B LTR ERV1 -234 308 12 1514 163 54 0 chr2 86034730 86035024 -167221559 + L1MA3 LINE L1 5988 6297 -8 302 344 23 8 chr2 86035294 86035425 -167221158 - LTR33 LTR ERVL -388 133 1 24 0 0 0 chr2 86035444 86035468 -167221115 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 86037677 86037698 -167218885 + AT_rich Low_complexity Low_complexity 1 21 0 342 323 137 16 chr2 86037891 86038256 -167218327 - L1MDa LINE L1 -4599 1941 1533 436 232 17 20 chr2 86038276 86038551 -167218032 + CT-rich Low_complexity Low_complexity 1 274 0 788 261 117 37 chr2 86038681 86038988 -167217595 - L1ME1 LINE L1 -2 6332 6051 252 0 0 0 chr2 86038988 86039016 -167217567 + (TG)n Simple_repeat Simple_repeat 1 28 0 357 24 0 0 chr2 86039017 86039059 -167217524 + (TA)n Simple_repeat Simple_repeat 2 43 0 788 261 117 37 chr2 86039059 86039394 -167217189 - L1ME1 LINE L1 -282 6052 5465 200 216 0 0 chr2 86039986 86040023 -167216560 + (CATATA)n Simple_repeat Simple_repeat 5 41 0 25 31 0 0 chr2 86040023 86040055 -167216528 + AT_rich Low_complexity Low_complexity 1 32 0 201 94 0 0 chr2 86040055 86040087 -167216496 + (TA)n Simple_repeat Simple_repeat 1 32 0 287 240 27 0 chr2 86040125 86040200 -167216383 + L1MA9 LINE L1 6017 6093 -219 386 200 63 11 chr2 86040208 86040303 -167216280 + L1MA9 LINE L1 6156 6255 -57 31 58 0 0 chr2 86040327 86040379 -167216204 + AT_rich Low_complexity Low_complexity 1 52 0 346 290 24 6 chr2 86040892 86041061 -167215522 + (TA)n Simple_repeat Simple_repeat 2 173 0 587 261 63 55 chr2 86042521 86042634 -167213949 + MER57A LTR ERV1 1 112 -291 360 77 0 0 chr2 86042634 86042686 -167213897 + (TG)n Simple_repeat Simple_repeat 2 53 0 587 261 63 55 chr2 86042686 86043003 -167213580 + MER57A LTR ERV1 112 403 0 21 0 0 0 chr2 86043588 86043609 -167212974 + AT_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr2 86044505 86044541 -167212042 + AT_rich Low_complexity Low_complexity 1 36 0 2726 86 29 0 chr2 86045462 86045847 -167210736 - L1PA10 LINE L1 -3 6165 5770 2006 150 140 7 chr2 86046861 86047268 -167209315 - LOR1b LTR ERV1 0 461 1 199 162 0 29 chr2 86047370 86047438 -167209145 + (TA)n Simple_repeat Simple_repeat 2 67 0 36 87 0 0 chr2 86047444 86047536 -167209047 + AT_rich Low_complexity Low_complexity 1 92 0 1682 167 0 35 chr2 86048496 86048808 -167207775 - Tigger3(Golem) DNA MER2_type -8 3021 2721 382 210 0 0 chr2 86048806 86048868 -167207715 - Tigger3(Golem) DNA MER2_type -2947 82 21 * 311 282 47 0 chr2 86049850 86049935 -167206648 + L1MC4 LINE L1 6615 6703 -1339 * 318 283 0 22 chr2 86049859 86049951 -167206632 - L1MC4 LINE L1 -1339 6703 6614 437 182 0 27 chr2 86049952 86050062 -167206521 + (TA)n Simple_repeat Simple_repeat 1 107 0 21 36 0 0 chr2 86051168 86051196 -167205387 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr2 86051392 86051415 -167205168 + AT_rich Low_complexity Low_complexity 1 23 0 207 218 23 11 chr2 86051436 86051523 -167205060 + (TA)n Simple_repeat Simple_repeat 1 88 0 1702 258 78 60 chr2 86051696 86052452 -167204131 + ERVL-E LTR ERVL 4758 5527 -237 233 255 20 71 chr2 86052679 86052777 -167203806 + MLT2E LTR ERVL 30 122 -506 * 811 231 162 3 chr2 86052756 86053139 -167203444 + LTR28 LTR ERV1 542 1020 0 255 363 12 0 chr2 86053569 86053649 -167202934 + L2 LINE L2 3191 3271 -42 294 256 121 50 chr2 86053652 86053851 -167202732 - L2 LINE L2 -1 3312 3100 1137 180 51 37 chr2 86053943 86054309 -167202274 - Ricksha DNA DNA -13 3233 2922 454 200 84 0 chr2 86054312 86054407 -167202176 + AluJb SINE Alu 1 103 -209 2629 113 10 3 chr2 86054410 86054810 -167201773 - LTR22A LTR ERVK -4 454 3 1198 200 0 0 chr2 86054810 86055025 -167201558 + AluSp SINE Alu 95 309 -4 1768 201 48 2 chr2 86055025 86055419 -167201164 - Ricksha DNA DNA -320 2926 2515 664 251 68 0 chr2 86055466 86055629 -167200954 + FAM SINE Alu 2 175 0 1030 136 13 0 chr2 86056583 86056737 -167199846 + THE1B LTR MaLR 209 364 0 11136 109 8 2 chr2 86056737 86058309 -167198274 + THE1B-int LTR MaLR 1 1580 0 1887 188 17 11 chr2 86058309 86058671 -167197912 + THE1B LTR MaLR 1 364 0 195 139 0 0 chr2 86058715 86058751 -167197832 + (TA)n Simple_repeat Simple_repeat 1 36 0 850 239 23 26 chr2 86059541 86059805 -167196778 - L1ME LINE L1 -342 5824 5562 672 274 92 20 chr2 86059783 86060089 -167196494 + L1ME1 LINE L1 5789 6116 -50 * 2235 104 0 0 chr2 86060147 86060456 -167196127 - AluY SINE Alu -2 309 1 199 274 65 0 chr2 86060603 86060665 -167195918 + MIR SINE MIR 168 233 -29 239 240 0 0 chr2 86061809 86061859 -167194724 + T-rich Low_complexity Low_complexity 4 53 0 1460 228 13 39 chr2 86062198 86062580 -167194003 - MLT1A2 LTR MaLR 0 374 3 7050 192 131 30 chr2 86062823 86064416 -167192167 + MER52A LTR ERV1 3 1755 0 1962 108 0 0 chr2 86064814 86065074 -167191509 - AluSg SINE Alu 0 310 51 263 146 0 0 chr2 86065789 86065830 -167190753 - LTR30 LTR ERV1 -546 176 136 301 194 0 16 chr2 86065930 86065992 -167190591 - LTR30 LTR ERV1 -599 123 63 954 223 5 5 chr2 86066697 86066917 -167189666 - L1P LINE L1 -1036 5110 4891 * 4792 138 45 23 chr2 86066914 86066982 -167189601 + L1PA15 LINE L1 5278 5343 -822 2301 86 0 30 chr2 86066982 86067283 -167189300 - AluSp SINE Alu -17 296 5 4792 138 45 23 chr2 86067283 86068071 -167188512 + L1PA15 LINE L1 5343 6153 -12 1458 93 0 10 chr2 86068144 86068349 -167188234 - AluSp SINE Alu -10 303 101 1477 65 0 0 chr2 86069942 86070126 -167186457 - AluY SINE Alu -9 302 119 8972 36 5 2 chr2 86070127 86071998 -167184585 - L1PA4 LINE L1 -11 6144 4272 7441 123 9 81 chr2 86071998 86072902 -167183681 + L1P LINE L1 3364 4332 -1814 1080 75 0 0 chr2 86072902 86073036 -167183547 - AluY SINE Alu -177 134 1 7441 123 9 81 chr2 86073036 86073665 -167182918 + L1P LINE L1 4332 4745 -1401 1694 145 175 6 chr2 86073665 86074031 -167182552 - MSTA LTR MaLR 0 428 1 7441 123 9 81 chr2 86074031 86074360 -167182223 + L1P LINE L1 4745 5096 -1050 25 0 0 0 chr2 86074380 86074405 -167182178 + AT_rich Low_complexity Low_complexity 1 25 0 496 331 58 24 chr2 86075157 86075450 -167181133 - LTR16C LTR ERVL -18 473 171 354 255 208 65 chr2 86076158 86076374 -167180209 + L2 LINE L2 2882 3128 -185 55 40 0 0 chr2 86076431 86076507 -167180076 + AT_rich Low_complexity Low_complexity 1 76 0 593 252 22 0 chr2 86076509 86076648 -167179935 + L2 LINE L2 3171 3312 -1 2244 91 0 0 chr2 86078021 86078317 -167178266 - AluY SINE Alu -15 296 1 1639 152 4 11 chr2 86078932 86079246 -167177337 + AluSx SINE Alu 39 312 0 237 273 166 11 chr2 86079452 86079723 -167176860 + L1MC4a LINE L1 5712 6024 -1784 637 318 23 13 chr2 86079957 86080265 -167176318 + L1MCc LINE L1 129 439 -5984 2387 85 7 0 chr2 86080427 86080734 -167175849 + AluSg SINE Alu 1 309 -1 823 326 28 3 chr2 86080789 86081071 -167175512 + L1MCc LINE L1 786 1074 -5349 2099 167 90 53 chr2 86081116 86082162 -167174421 - SATR1 Satellite Satellite -1 1084 1 2197 160 104 11 chr2 86082192 86083097 -167173486 - SATR1 Satellite Satellite -2 988 1 404 237 0 40 chr2 86083098 86083275 -167173308 + (TAA)n Simple_repeat Simple_repeat 3 172 0 67 42 0 0 chr2 86083382 86083477 -167173106 + AT_rich Low_complexity Low_complexity 1 95 0 372 146 62 56 chr2 86083477 86083655 -167172928 + (TTAA)n Simple_repeat Simple_repeat 1 179 0 2192 190 112 27 chr2 86083825 86086430 -167170153 + SATR1 Satellite Satellite 1 2827 -85 24 67 0 0 chr2 86086921 86086966 -167169617 + AT_rich Low_complexity Low_complexity 1 45 0 387 318 157 33 chr2 86089006 86089535 -167167048 - L2 LINE L2 -231 3041 2456 353 251 120 46 chr2 86089551 86089726 -167166857 + L2 LINE L2 642 829 -2485 354 250 13 0 chr2 86090187 86090263 -167166320 - MER2 DNA MER2_type -1 344 268 1053 164 11 0 chr2 86090378 86090561 -167166022 - MER2 DNA MER2_type -160 185 1 271 315 68 73 chr2 86091035 86091552 -167165031 + L2 LINE L2 2030 2543 -771 189 0 0 0 chr2 86092168 86092189 -167164394 + (A)n Simple_repeat Simple_repeat 1 21 0 1721 196 36 3 chr2 86092562 86092899 -167163684 + MER7A DNA MER2_type 1 346 0 387 157 14 14 chr2 86093070 86093140 -167163443 - MER3 DNA MER1_type -131 78 9 594 218 98 11 chr2 86093156 86093330 -167163253 + MER5A DNA MER1_type 1 189 0 416 19 19 0 chr2 86093343 86093396 -167163187 + (TC)n Simple_repeat Simple_repeat 1 54 0 297 0 0 0 chr2 86093395 86093428 -167163155 + (CA)n Simple_repeat Simple_repeat 1 33 0 * 960 306 26 53 chr2 86093689 86094156 -167162427 - LTR16A1 LTR ERVL 0 457 4 4005 101 2 0 chr2 86095870 86096423 -167160160 - MER41A LTR ERV1 0 554 1 1077 232 75 50 chr2 86097067 86097191 -167159392 + MLT1A2 LTR MaLR 4 123 -251 2747 112 49 7 chr2 86097191 86097602 -167158981 - MSTA LTR MaLR 0 428 1 1077 232 75 50 chr2 86097602 86097839 -167158744 + MLT1A2 LTR MaLR 123 374 0 22 0 0 0 chr2 86098073 86098095 -167158488 + AT_rich Low_complexity Low_complexity 1 22 0 1199 236 43 46 chr2 86098864 86098919 -167157664 + Tigger5 DNA MER2_type 1 55 -2268 1659 138 43 87 chr2 86098919 86099311 -167157272 + THE1C LTR MaLR 1 375 0 1199 236 43 46 chr2 86099311 86099560 -167157023 + Tigger5 DNA MER2_type 55 304 -2019 392 234 0 0 chr2 86099555 86099632 -167156951 + Tigger5 DNA MER2_type 2247 2323 0 * 22 0 0 0 chr2 86100609 86100631 -167155952 + AT_rich Low_complexity Low_complexity 1 22 0 3912 173 12 0 chr2 86100845 86101564 -167155019 - L1PB4 LINE L1 -2 6154 5427 233 333 71 21 chr2 86102117 86102258 -167154325 - L1ME LINE L1 -490 5631 5484 26 0 0 0 chr2 86102337 86102363 -167154220 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr2 86102477 86102498 -167154085 + AT_rich Low_complexity Low_complexity 1 21 0 379 242 186 0 chr2 86102550 86102674 -167153909 + MER58B DNA MER1_type 167 313 -28 1401 188 104 13 chr2 86102674 86102983 -167153600 + MER1B DNA MER1_type 1 337 0 310 289 87 40 chr2 86103023 86103196 -167153387 - L1MDa LINE L1 -4414 2126 1946 1934 171 100 40 chr2 86103228 86103708 -167152875 - L1MC3 LINE L1 -8 7777 7269 4725 175 41 9 chr2 86103724 86104489 -167152094 - L1PB3 LINE L1 0 6154 5415 183 42 0 0 chr2 86104489 86104513 -167152070 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1925 92 0 4 chr2 86104513 86104773 -167151810 - AluSc SINE Alu -24 285 27 4725 175 41 9 chr2 86104773 86105220 -167151363 - L1PB3 LINE L1 -738 5416 4898 316 250 29 48 chr2 86105223 86105327 -167151256 - L1MC3 LINE L1 -535 7250 7149 261 211 0 0 chr2 86105327 86105379 -167151204 - MLT1F1 LTR MaLR -480 87 36 1399 220 22 35 chr2 86105381 86105785 -167150798 - L1MC3 LINE L1 -689 7096 6698 206 225 0 0 chr2 86105789 86105829 -167150754 + CT-rich Low_complexity Low_complexity 1 40 0 2081 123 3 0 chr2 86105928 86106229 -167150354 - AluSx SINE Alu -10 302 1 21 0 0 0 chr2 86106270 86106291 -167150292 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 86106316 86106344 -167150239 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 86107507 86107529 -167149054 + AT_rich Low_complexity Low_complexity 1 22 0 251 209 0 12 chr2 86108006 86108092 -167148491 + CT-rich Low_complexity Low_complexity 2 86 0 24 0 0 0 chr2 86109383 86109407 -167147176 + AT_rich Low_complexity Low_complexity 1 24 0 200 227 0 0 chr2 86110636 86110680 -167145903 + A-rich Low_complexity Low_complexity 1 44 0 33 43 0 0 chr2 86110957 86111004 -167145579 + AT_rich Low_complexity Low_complexity 1 47 0 25 0 0 0 chr2 86111949 86111974 -167144609 + AT_rich Low_complexity Low_complexity 1 25 0 186 43 0 0 chr2 86112451 86112474 -167144109 + (TAAA)n Simple_repeat Simple_repeat 4 26 0 22 35 0 0 chr2 86113622 86113651 -167142932 + AT_rich Low_complexity Low_complexity 1 29 0 2165 94 6 50 chr2 86114525 86114844 -167141739 + AluSq SINE Alu 1 305 -8 1657 273 122 21 chr2 86115204 86117061 -167139522 + L1ME2 LINE L1 3804 5848 -316 425 369 21 21 chr2 86117168 86117404 -167139179 - L3 LINE CR1 -406 1171 936 2263 192 36 5 chr2 86117810 86118257 -167138326 + LOR1b LTR ERV1 1 461 0 1638 178 93 16 chr2 86118257 86118622 -167137961 + LOR1b-int LTR ERV1 1 393 -7727 4195 154 89 8 chr2 86118623 86119400 -167137183 + LOR1b-int LTR ERV1 203 1042 -7078 3597 136 37 29 chr2 86119392 86120041 -167136542 + LOR1b-int LTR ERV1 4871 5524 -2596 * 1684 112 20 0 chr2 86120040 86120291 -167136292 + LOR1b-int LTR ERV1 5809 6064 -2056 * 523 187 0 0 chr2 86120290 86120381 -167136202 + LOR1b-int LTR ERV1 8030 8120 0 * 2134 213 39 0 chr2 86120385 86120822 -167135761 + LOR1b LTR ERV1 8 461 0 974 136 6 2 chr2 86121097 86121271 -167135312 + pTR5 LTR ERV1 1481 1692 -746 244 33 0 0 chr2 86121274 86121304 -167135279 + MER4D LTR ERV1 874 903 0 1321 148 5 9 chr2 86122877 86123094 -167133489 + AluSg SINE Alu 1 216 -94 1609 208 42 15 chr2 86124703 86125106 -167131477 + LTR52 LTR ERVL 8 421 0 545 348 60 45 chr2 86126579 86127138 -167129445 - L2 LINE L2 0 3313 2751 747 359 121 32 chr2 86127377 86128301 -167128282 - L2 LINE L2 -913 2401 1396 733 227 35 79 chr2 86128904 86128968 -167127615 + MER58A DNA MER1_type 2 67 -2353 2040 147 0 0 chr2 86128968 86129274 -167127309 - AluSq SINE Alu -7 306 1 733 227 35 79 chr2 86129274 86129438 -167127145 + MER58A DNA MER1_type 67 220 -4 48 53 0 0 chr2 86129617 86129693 -167126890 + AT_rich Low_complexity Low_complexity 1 76 0 261 0 0 0 chr2 86130597 86130626 -167125957 + (CA)n Simple_repeat Simple_repeat 2 30 0 195 204 0 0 chr2 86130629 86130673 -167125910 + (TA)n Simple_repeat Simple_repeat 2 45 0 1935 138 57 31 chr2 86130795 86131149 -167125434 + THE1B LTR MaLR 2 364 0 32 57 0 0 chr2 86131341 86131394 -167125189 + AT_rich Low_complexity Low_complexity 1 53 0 636 237 63 28 chr2 86131927 86132180 -167124403 - L1M4 LINE L1 -1584 4562 4301 22 0 0 0 chr2 86132613 86132635 -167123948 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 86132714 86132736 -167123847 + AT_rich Low_complexity Low_complexity 1 22 0 349 321 106 51 chr2 86133173 86133466 -167123117 - HAL1 LINE L1 -1322 1185 877 2196 200 88 77 chr2 86133557 86134373 -167122210 + LTR1B LTR ERV1 2 826 0 1076 256 60 66 chr2 86134563 86135016 -167121567 - L1MC4 LINE L1 -1132 6910 6461 1710 180 45 18 chr2 86135357 86135690 -167120893 + MER7A DNA MER2_type 6 345 -1 1576 188 79 9 chr2 86135735 86136064 -167120519 + MLT1A1 LTR MaLR 4 355 -10 1572 262 116 16 chr2 86136865 86137434 -167119149 + MLT1E2 LTR MaLR 1 626 0 263 340 25 56 chr2 86137498 86137660 -167118923 - L2 LINE L2 -181 3091 2935 1988 201 41 7 chr2 86138155 86138573 -167118010 - MSTB1 LTR MaLR 0 432 1 21 0 0 0 chr2 86139033 86139054 -167117529 + AT_rich Low_complexity Low_complexity 1 21 0 396 145 0 0 chr2 86139073 86139142 -167117441 + L1PB4 LINE L1 6088 6156 0 284 308 21 14 chr2 86139279 86139422 -167117161 + L1M3c LINE L1 1225 1368 -4773 375 296 139 81 chr2 86139675 86140179 -167116404 + L1ME3 LINE L1 1424 1956 -4440 22 94 0 0 chr2 86140424 86140488 -167116095 + AT_rich Low_complexity Low_complexity 1 64 0 1107 277 69 48 chr2 86140497 86141269 -167115314 + L1ME3 LINE L1 2308 3095 -3120 2131 124 132 13 chr2 86141453 86141833 -167114750 + MSTA LTR MaLR 3 427 -1 1408 298 94 17 chr2 86141862 86142544 -167114039 + L1ME3 LINE L1 4256 4884 -1355 186 43 0 0 chr2 86142544 86142567 -167114016 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1408 298 94 17 chr2 86142567 86143357 -167113226 + L1ME3 LINE L1 4884 5842 -397 350 317 95 18 chr2 86143398 86143619 -167112964 + L1ME3 LINE L1 5947 6184 -47 431 173 29 39 chr2 86144355 86144459 -167112124 - L1M3 LINE L1 -631 5703 5601 392 130 14 0 chr2 86144459 86144528 -167112055 + CT-rich Low_complexity Low_complexity 2 71 0 1675 158 66 6 chr2 86144551 86144886 -167111697 - L1M3 LINE L1 -558 5610 5256 235 248 50 19 chr2 86144908 86145069 -167111514 + (TA)n Simple_repeat Simple_repeat 1 166 0 25 51 0 0 chr2 86145183 86145222 -167111361 + AT_rich Low_complexity Low_complexity 1 39 0 416 103 0 0 chr2 86145222 86145290 -167111293 - L1MA5 LINE L1 -17 6283 6216 237 297 0 30 chr2 86145594 86145695 -167110888 + CT-rich Low_complexity Low_complexity 2 99 0 45 19 0 0 chr2 86146922 86146974 -167109609 + AT_rich Low_complexity Low_complexity 1 52 0 917 181 0 0 chr2 86147176 86147325 -167109258 + FRAM SINE Alu 5 153 -23 1080 228 4 9 chr2 86147803 86148031 -167108552 - AluJo SINE Alu -23 289 63 259 335 77 22 chr2 86148537 86148719 -167107864 + L2 LINE L2 1794 1985 -1329 210 118 0 0 chr2 86150065 86150099 -167106484 + (TG)n Simple_repeat Simple_repeat 1 34 0 231 293 12 0 chr2 86151705 86151787 -167104796 - HAL1 LINE L1 -1016 1491 1409 396 0 0 0 chr2 86154429 86154473 -167102110 + (CA)n Simple_repeat Simple_repeat 1 44 0 23 0 0 0 chr2 86154953 86154976 -167101607 + AT_rich Low_complexity Low_complexity 1 23 0 237 178 0 0 chr2 86155345 86155390 -167101193 + (TA)n Simple_repeat Simple_repeat 1 45 0 495 202 21 0 chr2 86155740 86155834 -167100749 + Tigger5 DNA MER2_type 3 98 -2225 * 1292 123 100 0 chr2 86155826 86156046 -167100537 + Tigger5 DNA MER2_type 2081 2322 -1 21 71 0 0 chr2 86156227 86156269 -167100314 + AT_rich Low_complexity Low_complexity 1 42 0 23 33 0 0 chr2 86156321 86156351 -167100232 + AT_rich Low_complexity Low_complexity 1 30 0 219 330 183 13 chr2 86156363 86156587 -167099996 - MIR SINE MIR 0 262 1 * 229 288 55 89 chr2 86156587 86156710 -167099873 - MIR SINE MIR -69 193 76 1245 219 123 47 chr2 86156735 86157182 -167099401 - MER74A LTR ERVL -10 548 68 32 43 0 0 chr2 86159271 86159317 -167097266 + AT_rich Low_complexity Low_complexity 1 46 0 1743 187 5 38 chr2 86159735 86160131 -167096452 - L1MB3 LINE L1 -1 6182 5800 10131 160 29 48 chr2 86160141 86162341 -167094242 - L1M4c LINE L1 -4027 2357 199 182 358 65 0 chr2 86162788 86162911 -167093672 + L2 LINE L2 3102 3232 -81 2083 108 0 14 chr2 86163242 86163538 -167093045 - AluSg SINE Alu -18 292 1 397 292 156 21 chr2 86164017 86164209 -167092374 - MIR SINE MIR -43 219 2 228 273 114 45 chr2 86164759 86164847 -167091736 + L1MEd LINE L1 763 856 -5778 210 271 0 43 chr2 86165073 86165143 -167091440 + MIR SINE MIR 183 249 -13 1209 269 60 51 chr2 86165275 86166121 -167090462 + L1MEd LINE L1 1085 2092 -4733 22 35 0 0 chr2 86166560 86166589 -167089994 + AT_rich Low_complexity Low_complexity 1 29 0 1004 325 124 39 chr2 86166819 86167587 -167088996 - L2 LINE L2 -1799 1515 683 184 296 0 19 chr2 86168023 86168077 -167088506 - MIR SINE MIR -38 224 172 331 338 66 25 chr2 86169184 86169382 -167087201 - MIR SINE MIR -32 230 25 5615 27 0 0 chr2 86169749 86170405 -167086178 + L1PA3 LINE L1 5500 6155 0 2088 284 77 29 chr2 86171042 86171922 -167084661 + L1MCb LINE L1 1 838 -5726 2103 128 3 3 chr2 86171922 86172226 -167084357 - AluSq SINE Alu -9 304 1 2088 284 77 29 chr2 86172226 86173911 -167082672 + L1MCb LINE L1 838 2865 -3699 303 301 29 19 chr2 86174145 86174248 -167082335 - MLT1J LTR MaLR -330 181 78 1501 194 9 31 chr2 86174715 86175123 -167081460 - AluJb SINE Alu 0 401 1 1254 155 47 100 chr2 86175435 86175815 -167080768 + L1MA4A LINE L1 5939 6298 -5 6237 95 193 12 chr2 86176738 86177782 -167078801 + MER11B LTR ERVK 1 1232 -4 2119 257 9 9 chr2 86178937 86179516 -167077067 - L1 LINE L1 -989 5157 4579 962 198 29 37 chr2 86179500 86179774 -167076809 + L1 LINE L1 5142 5413 -743 * 2883 246 12 45 chr2 86180263 86181147 -167075436 - L1M3f LINE L1 -4114 1214 360 * 3355 206 37 29 chr2 86181142 86182771 -167073812 - L1MC1 LINE L1 -323 6010 4378 2252 112 0 3 chr2 86182881 86183195 -167073388 - AluSq SINE Alu 0 313 1 278 324 35 42 chr2 86183321 86183463 -167073120 + L2 LINE L2 3123 3263 -9 1946 121 0 10 chr2 86185165 86185455 -167071128 + AluY SINE Alu 1 287 -24 195 42 0 0 chr2 86185458 86185482 -167071101 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 285 241 34 66 chr2 86185638 86185652 -167070931 - L1P5 LINE L1 -675 5476 5463 2355 75 0 3 chr2 86185652 86185958 -167070625 + AluY SINE Alu 1 305 -6 285 241 34 66 chr2 86185958 86186131 -167070452 - L1P5 LINE L1 -688 5463 5295 364 269 33 6 chr2 86186634 86186816 -167069767 - L1M4 LINE L1 -1588 4558 4372 296 304 100 9 chr2 86186853 86187073 -167069510 - L1M4 LINE L1 -1897 4249 4010 1110 241 110 66 chr2 86187096 86187614 -167068969 + MLT1F LTR MaLR 2 542 0 503 280 143 28 chr2 86187678 86188110 -167068473 - L1M4 LINE L1 -2159 3987 3506 354 293 159 37 chr2 86188365 86188635 -167067948 - L1M4 LINE L1 -2947 3199 2897 319 289 108 35 chr2 86188686 86188946 -167067637 - L1M4 LINE L1 -3373 2773 2495 327 352 5 5 chr2 86188978 86189197 -167067386 - L1M4 LINE L1 -3656 2490 2272 490 215 8 8 chr2 86240250 86240380 -167016203 - L1 LINE L1 -1744 4402 4273 370 117 88 0 chr2 86240380 86240517 -167016066 + (TTATA)n Simple_repeat Simple_repeat 5 153 0 31 44 0 0 chr2 86240517 86240562 -167016021 + AT_rich Low_complexity Low_complexity 1 45 0 729 192 0 0 chr2 86240562 86240682 -167015901 - AluSq/x SINE Alu -192 120 1 922 201 18 14 chr2 86240691 86240910 -167015673 - L1 LINE L1 -879 6227 6008 988 182 11 11 chr2 86240910 86241091 -167015492 - AluJo SINE Alu -129 183 3 2989 201 28 5 chr2 86241102 86241773 -167014810 - L1 LINE L1 -1101 6005 5319 256 164 0 41 chr2 86241780 86241800 -167014783 + (TA)n Simple_repeat Simple_repeat 1 20 -50 2234 127 11 24 chr2 86241800 86242171 -167014412 - L1PB1 LINE L1 -2 6865 6500 256 164 0 41 chr2 86242171 86242223 -167014360 + (TA)n Simple_repeat Simple_repeat 20 70 0 * 13250 199 24 8 chr2 86242211 86247533 -167009050 - L1PB1 LINE L1 -360 6507 1115 1079 178 10 0 chr2 86247526 86247728 -167008855 - L1PB1 LINE L1 -6659 204 1 * 7041 259 49 32 chr2 86247872 86249775 -167006808 - L1 LINE L1 -1761 5345 3475 2489 47 0 0 chr2 86249775 86250073 -167006510 - AluY SINE Alu -13 298 1 7041 259 49 32 chr2 86250073 86252421 -167004162 - L1 LINE L1 -3631 3475 1169 1418 247 19 3 chr2 86252501 86252817 -167003766 - L1 LINE L1 -6703 327 7 22 35 0 0 chr2 86252998 86253027 -167003556 + AT_rich Low_complexity Low_complexity 1 29 0 3774 94 20 20 chr2 86254318 86254872 -167001711 - MER41A LTR ERV1 0 554 1 204 143 0 89 chr2 86254890 86254946 -167001637 + (TTTTTA)n Simple_repeat Simple_repeat 1 51 0 25 0 0 0 chr2 86255075 86255100 -167001483 + AT_rich Low_complexity Low_complexity 1 25 0 27 0 0 0 chr2 86255149 86255176 -167001407 + AT_rich Low_complexity Low_complexity 1 27 0 387 0 0 0 chr2 86255952 86255995 -167000588 + (TG)n Simple_repeat Simple_repeat 2 44 0 1469 118 4 17 chr2 86255996 86256234 -167000349 + L1PB2 LINE L1 5914 6148 -3 273 125 0 0 chr2 86256240 86256296 -167000287 + (TA)n Simple_repeat Simple_repeat 2 57 0 868 206 47 30 chr2 86256566 86256938 -166999645 - MLT2B2 LTR ERVL -46 474 1 738 256 68 51 chr2 86256950 86258917 -166997666 - L1M4 LINE L1 -1088 5058 2983 787 270 156 9 chr2 86258929 86259271 -166997312 - L1MEc LINE L1 -5258 1138 717 366 23 0 0 chr2 86259271 86259314 -166997269 + (TG)n Simple_repeat Simple_repeat 2 44 0 787 270 156 9 chr2 86259314 86259408 -166997175 - L1MEc LINE L1 -5679 717 638 718 216 54 27 chr2 86259427 86259649 -166996934 + MER96B DNA MER1_type? 178 405 -12 1334 316 27 14 chr2 86259659 86260174 -166996409 - L1MEc LINE L1 -5826 570 49 390 269 19 10 chr2 86260229 86260333 -166996250 + MIR SINE MIR 112 216 -46 22 0 0 0 chr2 86261185 86261207 -166995376 + AT_rich Low_complexity Low_complexity 1 22 0 2051 110 7 10 chr2 86261700 86261999 -166994584 - AluSx SINE Alu -14 298 1 26 50 0 0 chr2 86262131 86262171 -166994412 + AT_rich Low_complexity Low_complexity 1 40 0 1790 170 55 27 chr2 86262635 86263000 -166993583 + THE1C LTR MaLR 1 375 0 279 329 174 0 chr2 86263179 86263340 -166993243 + MIR SINE MIR 74 262 0 1301 203 44 27 chr2 86263420 86263715 -166992868 - AluJo SINE Alu -12 300 1 474 0 45 0 chr2 86263759 86263825 -166992758 + (TCTA)n Simple_repeat Simple_repeat 4 72 0 31 44 0 0 chr2 86265125 86265170 -166991413 + AT_rich Low_complexity Low_complexity 1 45 0 563 0 15 0 chr2 86266131 86266198 -166990385 + (TAAAA)n Simple_repeat Simple_repeat 2 69 0 4447 194 22 18 chr2 86267413 86268246 -166988337 - L1P LINE L1 -3482 2664 1825 2235 114 0 3 chr2 86268246 86268554 -166988029 + AluSq SINE Alu 4 310 -3 4447 194 22 18 chr2 86268554 86268659 -166987924 - L1P LINE L1 -4321 1825 1722 13550 167 8 13 chr2 86268659 86272041 -166984542 + L1PA12 LINE L1 2782 6168 0 343 321 24 30 chr2 86272063 86272231 -166984352 + L1MCa LINE L1 1223 1389 -5027 261 276 36 24 chr2 86272339 86272507 -166984076 + L1MCa LINE L1 1601 1920 -867 290 351 79 18 chr2 86272743 86272908 -166983675 - MIR SINE MIR -45 217 43 29 47 0 0 chr2 86273193 86273236 -166983347 + AT_rich Low_complexity Low_complexity 1 43 0 384 348 27 37 chr2 86273319 86273615 -166982968 + L1MCa LINE L1 2420 2712 -3714 263 232 12 0 chr2 86273752 86273834 -166982749 + GA-rich Low_complexity Low_complexity 4 86 0 4079 232 71 15 chr2 86273905 86274909 -166981674 + L1MC3 LINE L1 6497 7582 -203 240 35 0 0 chr2 86274909 86274938 -166981645 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 4079 232 71 15 chr2 86274938 86275146 -166981437 + L1MC3 LINE L1 7582 7777 -8 302 304 48 24 chr2 86275182 86275350 -166981233 + L1MEd LINE L1 2181 2352 -3777 625 249 15 51 chr2 86275354 86275551 -166981032 - MLT1A1 LTR MaLR 0 365 176 642 149 79 0 chr2 86275557 86275671 -166980912 - AluSg/x SINE Alu -12 300 178 723 184 48 7 chr2 86275671 86275818 -166980765 - MLT1A1 LTR MaLR -209 156 4 22 35 0 0 chr2 86275928 86275957 -166980626 + AT_rich Low_complexity Low_complexity 1 29 0 180 242 0 30 chr2 86276370 86276469 -166980114 + GA-rich Low_complexity Low_complexity 2 97 0 31 58 0 0 chr2 86277950 86278002 -166978581 + AT_rich Low_complexity Low_complexity 1 52 0 348 281 7 7 chr2 86279259 86279394 -166977189 + (TA)n Simple_repeat Simple_repeat 2 136 0 497 80 0 91 chr2 86280057 86280094 -166976489 + MADE1 DNA Mariner 1 40 -40 2308 81 0 0 chr2 86280094 86280390 -166976193 - AluSc SINE Alu -10 299 4 497 80 0 91 chr2 86280390 86280440 -166976143 + MADE1 DNA Mariner 40 80 0 208 256 47 0 chr2 86280717 86280803 -166975780 + (TTTA)n Simple_repeat Simple_repeat 3 92 0 528 310 138 4 chr2 86281857 86282089 -166974494 - LTR40a LTR ERVL 0 519 257 2252 294 46 46 chr2 86282126 86283213 -166973370 + L1PA13 LINE L1 1 1514 -5273 26 0 0 0 chr2 86283590 86283616 -166972967 + AT_rich Low_complexity Low_complexity 1 26 0 281 287 106 0 chr2 86283729 86283823 -166972760 - MER94 DNA DNA -28 106 3 191 423 29 12 chr2 86284528 86284769 -166971814 + L3 LINE CR1 1291 1535 -42 2849 10 0 0 chr2 86285262 86285575 -166971008 - AluYb8 SINE Alu -5 313 1 413 277 0 0 chr2 86286337 86286456 -166970127 - LTR33 LTR ERVL -1 520 402 642 324 19 0 chr2 86286464 86286677 -166969906 - LTR33 LTR ERVL -304 217 1 1898 159 10 0 chr2 86287993 86288301 -166968282 - AluJb SINE Alu -1 311 1 2287 186 93 13 chr2 86289941 86290478 -166966105 - L1MC2 LINE L1 -11 7770 6260 501 301 26 19 chr2 86290609 86290765 -166965818 - MER5B DNA MER1_type -20 158 2 384 22 0 0 chr2 86291378 86291423 -166965160 + (TG)n Simple_repeat Simple_repeat 2 46 0 2565 37 0 0 chr2 86291434 86291732 -166964851 - AluY SINE Alu -13 298 1 21 0 0 0 chr2 86291992 86292013 -166964570 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 86293177 86293205 -166963378 + AT_rich Low_complexity Low_complexity 1 28 0 33 0 0 0 chr2 86293398 86293431 -166963152 + AT_rich Low_complexity Low_complexity 1 33 0 390 127 0 0 chr2 86293602 86293673 -166962910 + (GA)n Simple_repeat Simple_repeat 2 72 0 38 39 0 0 chr2 86294185 86294237 -166962346 + AT_rich Low_complexity Low_complexity 1 52 0 38 0 0 0 chr2 86294514 86294552 -166962031 + AT_rich Low_complexity Low_complexity 1 38 0 23 78 0 0 chr2 86294886 86294937 -166961646 + AT_rich Low_complexity Low_complexity 1 51 0 1511 73 9 1 chr2 86295544 86295757 -166960826 - L1PA5 LINE L1 -196 5955 5737 * 5032 51 0 7 chr2 86295756 86296745 -166959838 + L1PA5 LINE L1 4750 5734 -421 257 286 93 62 chr2 86296796 86297186 -166959397 + L1ME LINE L1 5351 5748 -373 1875 148 0 3 chr2 86297186 86297503 -166959080 + AluSx SINE Alu 1 316 0 257 286 93 62 chr2 86297503 86297533 -166959050 + L1ME LINE L1 5748 5776 -345 1204 237 58 7 chr2 86297693 86297850 -166958733 - AluJo SINE Alu -6 296 118 345 47 0 0 chr2 86297850 86297893 -166958690 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 1204 237 58 7 chr2 86297893 86298013 -166958570 - AluJo SINE Alu -184 118 5 852 264 91 48 chr2 86298047 86298535 -166958048 - MER77 LTR ERV1 -4 601 54 638 244 132 68 chr2 86298820 86299215 -166957368 - LTR37B LTR ERV1 0 468 41 2071 105 3 33 chr2 86299215 86299520 -166957063 - AluSp SINE Alu -16 297 2 638 244 132 68 chr2 86299520 86299563 -166957020 - LTR37B LTR ERV1 -427 41 2 1070 227 66 68 chr2 86300957 86301323 -166955260 - MLT1A1 LTR MaLR 0 365 1 21 36 0 0 chr2 86301358 86301386 -166955197 + AT_rich Low_complexity Low_complexity 1 28 0 3444 212 46 27 chr2 86301513 86301562 -166955021 + L1MC3 LINE L1 5393 5440 -2345 2218 100 0 0 chr2 86301562 86301852 -166954731 + AluSc SINE Alu 1 290 -19 3444 212 46 27 chr2 86301852 86302732 -166953851 + L1MC3 LINE L1 5440 6340 -1445 666 181 44 102 chr2 86302731 86302766 -166953817 + L1MC3 LINE L1 7572 7607 -178 * 1773 164 7 10 chr2 86302766 86303065 -166953518 + AluJb SINE Alu 1 298 -14 666 181 44 102 chr2 86303065 86303255 -166953328 + L1MC3 LINE L1 7607 7784 -1 3591 39 0 0 chr2 86303345 86303779 -166952804 - L1PA5 LINE L1 -5 6149 5716 296 282 26 58 chr2 86304431 86304587 -166951996 - MIR SINE MIR -58 204 54 191 254 0 68 chr2 86305474 86305533 -166951050 - L2 LINE L2 -12 3260 3206 3150 211 30 3 chr2 86306125 86306813 -166949770 - MER67C LTR ERV1 -3 707 1 1640 238 54 5 chr2 86307794 86308256 -166948327 - MER89 LTR ERV1 0 559 13 234 302 79 0 chr2 86308262 86308325 -166948258 - MIR SINE MIR -194 68 1 394 221 186 98 chr2 86309103 86309388 -166947195 - LTR37A LTR ERV1 -111 315 6 675 211 113 43 chr2 86309517 86309702 -166946881 + MER58C DNA MER1_type 10 207 -8 211 247 195 26 chr2 86311810 86311887 -166944696 + MIR SINE MIR 91 180 -82 184 339 18 0 chr2 86312253 86312309 -166944274 + MIR SINE MIR 200 256 -6 225 154 0 0 chr2 86313416 86313455 -166943128 + (TA)n Simple_repeat Simple_repeat 1 39 0 1851 146 17 0 chr2 86315325 86315626 -166940957 - AluSx SINE Alu -6 306 1 23 54 0 0 chr2 86316561 86316598 -166939985 + AT_rich Low_complexity Low_complexity 1 37 0 231 261 31 0 chr2 86317007 86317072 -166939511 + MIR SINE MIR 112 178 -84 1788 154 23 7 chr2 86317142 86317441 -166939142 - AluJb SINE Alu -8 304 1 25 0 0 0 chr2 86317743 86317768 -166938815 + AT_rich Low_complexity Low_complexity 1 25 0 987 328 135 9 chr2 86318062 86318852 -166937731 + L2 LINE L2 2429 3311 -2 351 323 83 53 chr2 86318991 86319522 -166937061 + L1MC4a LINE L1 5346 5812 -358 349 282 124 35 chr2 86320062 86320264 -166936319 + MLT1I LTR MaLR 40 259 -150 326 218 55 45 chr2 86321915 86322025 -166934558 - MER94 DNA DNA 0 134 24 565 293 23 6 chr2 86322640 86322814 -166933769 - MER45A DNA AcHobo 0 178 2 277 422 35 0 chr2 86323557 86323730 -166932853 - MIR SINE MIR -37 225 47 1445 186 13 6 chr2 86324688 86325000 -166931583 - L1MB1 LINE L1 -1 6167 5854 711 124 0 0 chr2 86325001 86325110 -166931473 - L1PBa LINE L1 -4131 2731 2563 238 250 0 0 chr2 86325098 86325146 -166931437 - L1MB1 LINE L1 -439 5873 5826 * 1986 130 41 0 chr2 86325161 86325454 -166931129 - AluSg SINE Alu -5 305 1 3329 217 43 3 chr2 86325475 86326248 -166930335 - L1MB1 LINE L1 -915 5231 4428 1231 187 45 41 chr2 86326326 86326593 -166929990 - AluJb SINE Alu -23 289 22 23 54 0 0 chr2 86328426 86328463 -166928120 + AT_rich Low_complexity Low_complexity 1 37 0 1484 259 28 20 chr2 86328559 86329065 -166927518 - L1ME1 LINE L1 0 6166 5657 289 281 130 17 chr2 86329120 86329351 -166927232 + L1M4c LINE L1 1390 1646 -4738 371 275 38 62 chr2 86329726 86329819 -166926764 + L1M4c LINE L1 2260 2354 -4209 2134 129 21 43 chr2 86329819 86330191 -166926392 + THE1B LTR MaLR 1 364 0 371 275 38 62 chr2 86330191 86330308 -166926275 + L1M4c LINE L1 2354 2465 -4098 338 249 128 45 chr2 86330318 86330461 -166926122 + L1M4c LINE L1 2503 2633 -3749 1782 184 0 23 chr2 86330461 86330765 -166925818 + AluJb SINE Alu 1 297 -15 338 249 128 45 chr2 86330765 86330910 -166925673 + L1M4c LINE L1 2633 2815 -3567 323 224 67 55 chr2 86330997 86331162 -166925421 + L1M4c LINE L1 2979 3145 -3237 200 35 35 0 chr2 86331267 86331296 -166925287 + (TAGA)n Simple_repeat Simple_repeat 4 33 0 511 351 59 16 chr2 86331439 86332005 -166924578 + L1M4c LINE L1 3622 4258 -2124 274 277 114 0 chr2 86332017 86332183 -166924400 + L1ME3A LINE L1 5986 6170 0 192 352 28 0 chr2 86332539 86332610 -166923973 + MIR SINE MIR 75 147 -61 367 311 114 23 chr2 86333370 86333634 -166922949 + L3 LINE CR1 1134 1421 -156 187 322 67 22 chr2 86333903 86333993 -166922590 + L2 LINE L2 3180 3273 -40 308 189 38 28 chr2 86334709 86334815 -166921768 + (TA)n Simple_repeat Simple_repeat 1 107 0 394 297 31 0 chr2 86336020 86336148 -166920435 - MIR SINE MIR -52 210 79 2294 218 82 20 chr2 86336295 86336980 -166919603 - L1MB7 LINE L1 -16 6666 5940 1761 262 40 40 chr2 86336978 86337706 -166918877 - L1MB7 LINE L1 -1835 4809 4082 * 2331 73 3 19 chr2 86337735 86338050 -166918533 - AluY SINE Alu -1 310 1 395 263 64 21 chr2 86338068 86338304 -166918279 - L1MB7 LINE L1 -4111 2535 2290 4239 257 76 41 chr2 86338395 86340347 -166916236 - L1MB7 LINE L1 -4563 2083 27 27 51 0 17 chr2 86341253 86341274 -166915309 + AT_rich Low_complexity Low_complexity 1 21 -37 7084 55 3 0 chr2 86341274 86342609 -166913974 - L1PA7 LINE L1 -2 6152 4819 27 51 0 17 chr2 86342609 86342646 -166913937 + AT_rich Low_complexity Low_complexity 21 58 0 210 37 0 0 chr2 86344640 86344667 -166911916 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 321 319 69 22 chr2 86346695 86346927 -166909656 + L1 LINE L1 2296 2538 -3608 23 68 0 0 chr2 86346967 86347011 -166909572 + AT_rich Low_complexity Low_complexity 1 44 0 25 65 0 0 chr2 86347155 86347201 -166909382 + AT_rich Low_complexity Low_complexity 1 46 0 24 32 0 0 chr2 86347356 86347387 -166909196 + AT_rich Low_complexity Low_complexity 1 31 0 1476 122 30 8 chr2 86347803 86348065 -166908518 - L1MA5A LINE L1 -3 6294 6027 22 35 0 0 chr2 86348487 86348516 -166908067 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr2 86348787 86348819 -166907764 + AT_rich Low_complexity Low_complexity 1 32 0 1011 114 104 64 chr2 86349058 86349144 -166907439 - MER30 DNA MER1_type 0 230 149 2226 98 13 16 chr2 86349144 86349451 -166907132 + AluSx SINE Alu 1 306 -6 1011 114 104 64 chr2 86349451 86349584 -166906999 - MER30 DNA MER1_type -81 149 2 21 0 0 0 chr2 86349978 86349999 -166906584 + AT_rich Low_complexity Low_complexity 1 21 0 329 359 48 15 chr2 86350482 86350688 -166905895 + MIR SINE MIR 12 224 -38 406 188 0 0 chr2 86351772 86351841 -166904742 + FRAM SINE Alu 33 101 -75 318 264 55 85 chr2 86353553 86353754 -166902829 + MLT1J LTR MaLR 297 491 -20 256 362 40 20 chr2 86353778 86353927 -166902656 + L2 LINE L2 2019 2170 -1144 31 0 0 0 chr2 86354296 86354327 -166902256 + AT_rich Low_complexity Low_complexity 1 31 0 7135 167 23 5 chr2 86354350 86355622 -166900961 + HSMAR2 DNA Mariner 6 1300 -2 1461 192 6 28 chr2 86356511 86356828 -166899755 - L1P LINE L1 -1753 4393 4084 203 136 45 0 chr2 86358986 86359030 -166897553 + A-rich Low_complexity Low_complexity 2 47 0 28 0 0 0 chr2 86359173 86359201 -166897382 + AT_rich Low_complexity Low_complexity 1 28 0 2365 90 0 3 chr2 86359201 86359511 -166897072 - AluSc SINE Alu 0 309 1 204 40 0 0 chr2 86359511 86359536 -166897047 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2045 92 0 0 chr2 86359536 86359787 -166896796 - AluSq SINE Alu -29 284 34 3132 176 79 46 chr2 86359916 86360676 -166895907 - LTR1 LTR ERV1 0 785 1 222 37 0 0 chr2 86360701 86360728 -166895855 + (T)n Simple_repeat Simple_repeat 1 27 0 1324 132 6 0 chr2 86360757 86360939 -166895644 - AluSx SINE Alu -129 183 1 642 278 87 48 chr2 86360939 86361318 -166895265 + LTR36 LTR ERV1 165 611 0 213 154 0 0 chr2 86361615 86361654 -166894929 + (CA)n Simple_repeat Simple_repeat 2 40 0 324 218 55 18 chr2 86362507 86362617 -166893966 + L1MC3 LINE L1 6109 6222 -1563 588 276 58 0 chr2 86364374 86364530 -166892053 + FRAM SINE Alu 1 165 -11 306 0 0 0 chr2 86366047 86366081 -166890502 + (TC)n Simple_repeat Simple_repeat 2 35 0 12300 159 32 17 chr2 86366108 86368308 -166888275 + Tigger1 DNA MER2_type 1 2232 -186 1015 225 27 0 chr2 86368352 86368574 -166888009 - AluJo SINE Alu -84 228 1 1609 175 15 24 chr2 86368641 86368978 -166887605 - L1MB8 LINE L1 -1 6177 5844 372 89 0 0 chr2 86368980 86369036 -166887547 + Alu SINE Alu 246 301 0 990 204 30 30 chr2 86369036 86369301 -166887282 - L1MB8 LINE L1 -327 5857 5593 662 245 83 34 chr2 86369298 86370067 -166886516 - L1MEc LINE L1 -4761 1635 792 * 21430 184 17 40 chr2 86370083 86371420 -166885163 - L1PA11 LINE L1 0 6489 5123 1822 195 16 16 chr2 86371420 86371795 -166884788 + THE1C LTR MaLR 1 375 0 21430 184 17 40 chr2 86371795 86377038 -166879545 - L1PA11 LINE L1 -1366 5123 10 2249 99 0 3 chr2 86377059 86377352 -166879231 - AluY SINE Alu -19 292 1 282 60 0 60 chr2 86377361 86377411 -166879172 + Tigger1 DNA MER2_type 2223 2269 -149 356 300 45 34 chr2 86377432 86377699 -166878884 - MER34B LTR ERV1 -18 547 278 657 220 7 14 chr2 86377872 86378013 -166878570 + Tigger1 DNA MER2_type 2278 2417 -1 396 40 0 0 chr2 86378061 86378111 -166878472 + (CA)n Simple_repeat Simple_repeat 2 51 0 3718 162 63 3 chr2 86378191 86378826 -166877757 - THE1-int LTR MaLR -907 673 1 352 312 16 24 chr2 86378866 86378991 -166877592 - MER61D LTR ERV1 -14 487 364 991 119 95 35 chr2 86379445 86379649 -166876934 - THE1C LTR MaLR -13 415 143 895 282 48 11 chr2 86379755 86380249 -166876334 + MER45C DNA AcHobo 413 953 0 496 282 147 8 chr2 86380519 86380764 -166875819 + LTR16C LTR ERVL 178 456 -35 1651 334 27 31 chr2 86380949 86382158 -166874425 + HERVI LTR ERV1 5324 7647 -128 2823 209 13 76 chr2 86382962 86383740 -166872843 - L1MC3 LINE L1 -7 7778 7050 465 143 84 25 chr2 86383830 86383904 -166872679 - L1MC3 LINE L1 -780 7005 6937 189 0 0 0 chr2 86383904 86383925 -166872658 + (TTA)n Simple_repeat Simple_repeat 1 21 0 465 143 84 25 chr2 86383925 86384029 -166872554 - L1MC3 LINE L1 -848 6937 6762 272 340 41 52 chr2 86385693 86385887 -166870696 + L2 LINE L2 3118 3309 -4 2169 99 0 20 chr2 86386021 86386315 -166870268 + AluSg SINE Alu 1 288 -22 207 362 80 36 chr2 86386357 86386495 -166870088 - L2 LINE L2 -4 3268 3125 2559 171 5 0 chr2 86386608 86387034 -166869549 - MSTA LTR MaLR 0 428 1 207 0 0 0 chr2 86387215 86387238 -166869345 + (TG)n Simple_repeat Simple_repeat 2 24 0 398 172 8 25 chr2 86387264 86387386 -166869197 + (TA)n Simple_repeat Simple_repeat 1 120 0 2006 123 20 0 chr2 86387527 86387819 -166868764 - AluSg SINE Alu -12 298 1 278 140 35 0 chr2 86388738 86388795 -166867788 + GA-rich Low_complexity Low_complexity 3 61 0 33 25 0 0 chr2 86388908 86388948 -166867635 + AT_rich Low_complexity Low_complexity 1 40 0 22 80 0 0 chr2 86389112 86389162 -166867421 + AT_rich Low_complexity Low_complexity 1 50 0 241 167 104 0 chr2 86389480 86389528 -166867055 - L1PB4 LINE L1 -1521 4625 4573 4347 190 21 29 chr2 86389528 86391058 -166865525 + L1PB4 LINE L1 4636 6154 -2 1699 202 159 147 chr2 86392534 86393335 -166863248 - LTR28 LTR ERV1 0 1020 17 355 278 77 10 chr2 86393766 86393960 -166862623 + L1M4 LINE L1 4387 4593 -1553 455 248 13 45 chr2 86394045 86394202 -166862381 - L1MA10 LINE L1 -3 6331 6180 195 281 27 75 chr2 86394265 86394411 -166862172 + MIR SINE MIR 124 262 0 2103 165 34 26 chr2 86394780 86395198 -166861385 + MSTB1 LTR MaLR 12 432 0 180 241 0 0 chr2 86397252 86397310 -166859273 + (TA)n Simple_repeat Simple_repeat 2 59 0 25 102 0 0 chr2 86397445 86397533 -166859050 + AT_rich Low_complexity Low_complexity 1 88 0 203 377 58 14 chr2 86398150 86398288 -166858295 - L3 LINE CR1 -178 1399 1256 270 349 125 19 chr2 86398451 86398715 -166857868 - L3 LINE CR1 -566 1011 720 1104 224 70 54 chr2 86398716 86399029 -166857554 + MER2 DNA MER2_type 25 342 -3 1317 180 130 89 chr2 86399619 86400079 -166856504 - MER101B LTR ERV1 -31 519 71 1641 186 82 88 chr2 86400284 86400832 -166855751 - LTR49 LTR ERV1 -49 546 2 2627 120 20 50 chr2 86400853 86400909 -166855674 - MSTA LTR MaLR 0 428 372 2118 99 4 0 chr2 86400909 86401213 -166855370 - AluSp SINE Alu 0 313 9 2627 120 20 50 chr2 86401213 86401596 -166854987 - MSTA LTR MaLR -56 372 1 4714 79 33 0 chr2 86401736 86402366 -166854217 - PABL_A LTR ERV1 -9 651 1 36 53 0 0 chr2 86402572 86402629 -166853954 + AT_rich Low_complexity Low_complexity 1 57 0 536 0 16 0 chr2 86403245 86403309 -166853274 + (TAGA)n Simple_repeat Simple_repeat 2 66 0 4412 183 12 39 chr2 86404736 86405539 -166851044 + L1PA13 LINE L1 1 782 -6799 721 310 113 14 chr2 86405546 86405910 -166850673 + L1PA13 LINE L1 1644 2043 -5531 12534 202 10 32 chr2 86405915 86408226 -166848357 + L1PA13 LINE L1 2183 4390 -3194 508 103 0 0 chr2 86408226 86408304 -166848279 - L1PA3 LINE L1 -5 6150 6073 12534 202 10 32 chr2 86408304 86409457 -166847126 + L1PA13 LINE L1 4390 5567 -2017 5644 105 36 6 chr2 86409460 86410787 -166845796 + L1PA13 LINE L1 6242 7601 0 347 286 266 5 chr2 86410919 86411118 -166845465 - MIR SINE MIR -1 261 11 264 30 0 0 chr2 86411228 86411261 -166845322 + (TG)n Simple_repeat Simple_repeat 2 34 0 2319 180 59 42 chr2 86411289 86411866 -166844717 + L1MA8 LINE L1 5705 6291 0 26 50 0 0 chr2 86412500 86412540 -166844043 + AT_rich Low_complexity Low_complexity 1 40 0 2114 134 0 0 chr2 86412677 86412983 -166843600 + AluSq SINE Alu 1 306 -7 241 252 84 28 chr2 86413421 86413528 -166843055 + MLT1L LTR MaLR 496 608 -7 366 23 0 0 chr2 86413941 86413984 -166842599 + U2 snRNA snRNA 12 54 -134 21 36 0 0 chr2 86414061 86414089 -166842494 + AT_rich Low_complexity Low_complexity 1 28 0 575 168 7 40 chr2 86414538 86414687 -166841896 + L1MA9 LINE L1 6163 6306 -6 261 329 0 0 chr2 86422464 86422549 -166834034 + (CA)n Simple_repeat Simple_repeat 2 86 0 607 148 49 0 chr2 86422981 86423123 -166833460 + CT-rich Low_complexity Low_complexity 4 152 0 2219 85 0 35 chr2 86423970 86424288 -166832295 - AluY SINE Alu -2 309 3 24 0 0 0 chr2 86424443 86424467 -166832116 + AT_rich Low_complexity Low_complexity 1 24 0 1333 207 3 57 chr2 86424685 86424984 -166831599 + AluJo SINE Alu 9 291 -21 397 315 112 79 chr2 86428444 86428872 -166827711 - L2 LINE L2 -571 2743 2302 218 369 71 15 chr2 86430438 86430636 -166825947 + MIR SINE MIR 54 262 0 28 95 0 0 chr2 86430822 86430906 -166825677 + AT_rich Low_complexity Low_complexity 1 84 0 255 348 87 38 chr2 86432133 86432317 -166824266 - MIR3 SINE MIR -1 207 15 355 328 82 8 chr2 86432952 86433086 -166823497 - L2 LINE L2 -3 3269 3126 2148 135 0 0 chr2 86436028 86436340 -166820243 + AluSx SINE Alu 1 312 0 2675 13 3 16 chr2 86436453 86436768 -166819815 + AluY SINE Alu 1 311 0 239 224 0 0 chr2 86438077 86438126 -166818457 + (CA)n Simple_repeat Simple_repeat 2 50 0 2137 152 44 2 chr2 86438308 86438717 -166817866 - L1MA5A LINE L1 -6 6291 5866 2428 181 52 14 chr2 86438717 86439489 -166817094 - L1MA5A LINE L1 -743 5403 4741 21 36 0 0 chr2 86439735 86439763 -166816820 + AT_rich Low_complexity Low_complexity 1 28 0 187 312 151 11 chr2 86439906 86439999 -166816584 - L2 LINE L2 0 3313 3208 252 273 193 34 chr2 86440663 86440839 -166815744 - MIR SINE MIR -8 254 51 204 40 0 0 chr2 86441482 86441507 -166815076 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 2064 107 7 7 chr2 86441652 86441951 -166814632 + AluY SINE Alu 1 299 -12 4277 50 5 3 chr2 86441960 86442529 -166814054 - L1P LINE L1 -804 5347 4776 * 7644 7 0 0 chr2 86442523 86443389 -166813194 + L1HS LINE L1 5290 6155 0 21 0 0 0 chr2 86444442 86444463 -166812120 + AT_rich Low_complexity Low_complexity 1 21 0 269 123 0 35 chr2 86445792 86445849 -166810734 + (TATG)n Simple_repeat Simple_repeat 2 56 0 448 304 125 32 chr2 86446598 86446910 -166809673 + MLT1J LTR MaLR 37 377 -134 30 45 0 0 chr2 86447396 86447440 -166809143 + AT_rich Low_complexity Low_complexity 1 44 0 983 173 84 0 chr2 86447825 86448050 -166808533 + L1MA5A LINE L1 6053 6296 -1 2162 216 60 21 chr2 86448160 86448675 -166807908 - MER54A LTR ERVL -2 899 365 216 0 0 0 chr2 86448686 86448710 -166807873 + (GA)n Simple_repeat Simple_repeat 1 24 0 259 320 0 0 chr2 86448770 86448845 -166807738 + MER45 DNA AcHobo 6 80 -1501 293 261 0 0 chr2 86448846 86448911 -166807672 + MER45 DNA AcHobo 1517 1581 0 1901 127 0 77 chr2 86448931 86449297 -166807286 + AluSx SINE Alu 1 340 0 630 136 13 136 chr2 86450558 86450713 -166805870 - MSTD LTR MaLR 0 396 261 971 91 30 0 chr2 86450714 86450846 -166805737 - AluSc SINE Alu -38 271 136 24 32 0 0 chr2 86451641 86451672 -166804911 + AT_rich Low_complexity Low_complexity 1 31 0 261 335 68 25 chr2 86451741 86451902 -166804681 + MIR SINE MIR 28 195 -67 420 197 8 15 chr2 86452174 86452306 -166804277 + (TA)n Simple_repeat Simple_repeat 1 131 0 15665 107 10 30 chr2 86453102 86453749 -166802834 - Charlie3 DNA MER1_type 0 2706 2047 2137 78 59 0 chr2 86453749 86454020 -166802563 - AluSg SINE Alu -19 291 5 15665 107 10 30 chr2 86454020 86455700 -166800883 - Charlie3 DNA MER1_type -659 2047 427 673 142 53 18 chr2 86455706 86455819 -166800764 - Charlie3 DNA MER1_type -1766 944 828 * 3139 137 20 0 chr2 86455800 86456254 -166800329 - Charlie3 DNA MER1_type -2247 463 1 243 339 85 18 chr2 86456332 86456640 -166799943 + L2 LINE L2 2734 3061 -211 1110 250 0 17 chr2 86456835 86457127 -166799456 + L1MB8 LINE L1 5879 6165 -13 274 298 102 67 chr2 86457400 86457685 -166798898 + LTR16A1 LTR ERVL 161 455 -2 620 243 73 0 chr2 86457903 86458039 -166798544 + FRAM SINE Alu 1 146 -30 225 0 0 0 chr2 86458042 86458067 -166798516 + (TAAAA)n Simple_repeat Simple_repeat 1 25 0 227 277 157 0 chr2 86458217 86458300 -166798283 + L2 LINE L2 3208 3303 -10 228 130 0 0 chr2 86458622 86458668 -166797915 + (TTG)n Simple_repeat Simple_repeat 3 48 0 1178 148 23 0 chr2 86458826 86459043 -166797540 + L1MA5A LINE L1 6076 6297 0 304 299 85 17 chr2 86459975 86460152 -166796431 + L1ME LINE L1 5577 5765 -356 1689 175 7 3 chr2 86460554 86460846 -166795737 - AluSq SINE Alu -19 294 2 385 267 144 7 chr2 86460929 86461075 -166795508 - L2 LINE L2 -668 2646 2481 1542 168 62 0 chr2 86461137 86461411 -166795172 + AluJb SINE Alu 1 291 -21 936 203 68 4 chr2 86461414 86461651 -166794932 + HAL1 LINE L1 1530 1781 -726 589 231 8 0 chr2 86461709 86461830 -166794753 + FLAM_A SINE Alu 1 122 -11 688 244 167 6 chr2 86461917 86462265 -166794318 + HAL1 LINE L1 2032 2435 -72 308 270 202 22 chr2 86462325 86462503 -166794080 + HAL1 LINE L1 2296 2505 -2 24 0 0 0 chr2 86462533 86462557 -166794026 + AT_rich Low_complexity Low_complexity 1 24 0 359 333 7 13 chr2 86463293 86463443 -166793140 + CT-rich Low_complexity Low_complexity 2 150 0 220 228 13 13 chr2 86463456 86463535 -166793048 + CT-rich Low_complexity Low_complexity 4 82 0 978 176 26 10 chr2 86463617 86463810 -166792773 + AluJo SINE Alu 104 299 -13 331 273 61 0 chr2 86464576 86464675 -166791908 - MER5A DNA MER1_type -76 113 9 1950 144 10 3 chr2 86464769 86465068 -166791515 - AluSx SINE Alu -7 305 5 22 0 0 0 chr2 86465116 86465138 -166791445 + AT_rich Low_complexity Low_complexity 1 22 0 223 345 136 0 chr2 86465477 86465587 -166790996 + L2 LINE L2 3141 3265 -7 284 242 8 40 chr2 86465734 86465858 -166790725 + (TCTA)n Simple_repeat Simple_repeat 3 122 0 188 272 43 136 chr2 86467539 86467701 -166788882 - L2 LINE L2 0 3313 3167 305 42 0 42 chr2 86468452 86468500 -166788083 + (TTTTG)n Simple_repeat Simple_repeat 2 47 0 1520 249 32 34 chr2 86469321 86469787 -166786796 - MLT1C LTR MaLR 0 467 3 189 0 0 0 chr2 86469813 86469834 -166786749 + (TAAAAA)n Simple_repeat Simple_repeat 2 22 0 3271 235 118 45 chr2 86469835 86470924 -166785659 - MLT1C-int LTR MaLR -26 1345 110 2145 137 3 0 chr2 86470924 86471231 -166785352 - AluSx SINE Alu -4 308 1 3271 235 118 45 chr2 86471231 86471350 -166785233 - MLT1C-int LTR MaLR -1261 110 1 1381 251 78 19 chr2 86471350 86471760 -166784823 - MLT1C LTR MaLR 0 467 34 352 96 19 0 chr2 86471776 86471828 -166784755 - MSTA LTR MaLR 0 428 376 2113 208 0 3 chr2 86471839 86472224 -166784359 - MST-int LTR MaLR -175 1476 1093 1887 135 10 0 chr2 86472221 86472518 -166784065 - MSTA-int LTR MaLR -1278 302 3 * 456 149 0 0 chr2 86472520 86472594 -166783989 - MSTA LTR MaLR 0 428 355 2017 30 0 0 chr2 86472601 86472837 -166783746 + L1PA5 LINE L1 5912 6147 -7 1875 168 48 6 chr2 86472862 86473219 -166783364 - MSTA LTR MaLR -56 372 1 9968 238 70 12 chr2 86473266 86477450 -166779133 - L1P5 LINE L1 -465 6405 1931 492 240 62 0 chr2 86477433 86477579 -166779004 + L1MA7 LINE L1 6136 6290 -1 * 6792 225 35 54 chr2 86477587 86480576 -166776007 + L1PA11 LINE L1 1 2914 -3547 15013 170 57 9 chr2 86480576 86484182 -166772401 + L1PA11 LINE L1 2842 6487 -2 31 82 0 0 chr2 86484182 86484255 -166772328 + AT_rich Low_complexity Low_complexity 1 73 0 36 0 0 0 chr2 86484371 86484407 -166772176 + AT_rich Low_complexity Low_complexity 1 36 0 2309 220 32 6 chr2 86484472 86484968 -166771615 + LTR53 LTR ERVL 1 509 -10 441 278 75 8 chr2 86485006 86485139 -166771444 + MER97a DNA MER1_type? 3 144 -750 5145 66 3 0 chr2 86485663 86486327 -166770256 + L1PA8 LINE L1 5493 6158 -14 1734 164 52 33 chr2 86488771 86489138 -166767445 + THE1C LTR MaLR 2 375 0 1674 125 6 120 chr2 86489505 86489691 -166766892 - AluJb SINE Alu -1 311 105 324 0 0 0 chr2 86489691 86489727 -166766856 + (CA)n Simple_repeat Simple_repeat 2 37 0 1674 125 6 120 chr2 86489727 86489751 -166766832 - AluJb SINE Alu -207 105 80 234 0 0 0 chr2 86489751 86489777 -166766806 + (TA)n Simple_repeat Simple_repeat 2 27 0 1674 125 6 120 chr2 86489777 86489916 -166766667 - AluJb SINE Alu -232 80 1 623 226 0 15 chr2 86490917 86491054 -166765529 - MIR SINE MIR 0 262 128 262 379 46 31 chr2 86491571 86491832 -166764751 + L2 LINE L2 3003 3267 -5 192 152 0 0 chr2 86493394 86493427 -166763156 + (CA)n Simple_repeat Simple_repeat 2 34 0 202 398 20 20 chr2 86493496 86493594 -166762989 + MIR SINE MIR 21 118 -90 28 29 0 0 chr2 86493842 86493877 -166762706 + AT_rich Low_complexity Low_complexity 1 35 0 1960 157 3 3 chr2 86493886 86494192 -166762391 + AluSx SINE Alu 1 306 -6 27 62 0 0 chr2 86494501 86494549 -166762034 + AT_rich Low_complexity Low_complexity 1 48 0 345 278 80 85 chr2 86494574 86495010 -166761573 - HAL1b LINE L1 -509 839 406 1742 184 0 7 chr2 86495702 86496007 -166760576 + AluJb SINE Alu 1 303 -9 21 0 0 0 chr2 86496333 86496354 -166760229 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr2 86496532 86496562 -166760021 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr2 86497079 86497108 -166759475 + AT_rich Low_complexity Low_complexity 1 29 0 710 144 6 31 chr2 86497185 86497345 -166759238 + CT-rich Low_complexity Low_complexity 1 156 0 26 64 0 0 chr2 86497623 86497670 -166758913 + AT_rich Low_complexity Low_complexity 1 47 0 29 60 0 0 chr2 86498073 86498123 -166758460 + AT_rich Low_complexity Low_complexity 1 50 0 205 341 57 11 chr2 86498222 86498310 -166758273 + MIR SINE MIR 35 126 -136 651 270 63 0 chr2 86498324 86498513 -166758070 - MER67D LTR ERV1 -8 506 306 201 39 0 0 chr2 86499692 86499718 -166756865 + (CAA)n Simple_repeat Simple_repeat 1 26 0 26 30 0 0 chr2 86499747 86499780 -166756803 + AT_rich Low_complexity Low_complexity 1 33 0 361 328 75 27 chr2 86499811 86499997 -166756586 + MIR SINE MIR 20 214 -48 28 0 0 0 chr2 86501098 86501126 -166755457 + AT_rich Low_complexity Low_complexity 1 28 0 351 0 0 0 chr2 86501801 86501840 -166754743 + (TG)n Simple_repeat Simple_repeat 2 40 0 6142 286 29 29 chr2 86502041 86504213 -166752370 + L1PA12 LINE L1 729 2900 -4681 1387 96 14 19 chr2 86504216 86504425 -166752158 - MLT2A2 LTR ERVL -245 208 1 22 35 0 0 chr2 86504530 86504559 -166752024 + AT_rich Low_complexity Low_complexity 1 29 0 1913 260 89 22 chr2 86504586 86505738 -166750845 - L1M1 LINE L1 -4411 1971 839 22 0 0 0 chr2 86506198 86506220 -166750363 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 86506634 86506662 -166749921 + AT_rich Low_complexity Low_complexity 1 28 0 199 250 0 0 chr2 86507240 86507284 -166749299 - MIR3 SINE MIR -39 169 126 181 0 69 0 chr2 86507697 86507726 -166748857 + (TA)n Simple_repeat Simple_repeat 1 31 0 21 0 0 0 chr2 86507803 86507824 -166748759 + AT_rich Low_complexity Low_complexity 1 21 0 215 177 16 0 chr2 86507829 86507891 -166748692 + (TA)n Simple_repeat Simple_repeat 1 63 0 1960 102 11 0 chr2 86508861 86509135 -166747448 - AluSg SINE Alu -29 281 5 666 240 35 61 chr2 86509292 86509667 -166746916 - L1MEc LINE L1 -2930 3285 2921 22 56 0 0 chr2 86509677 86509713 -166746870 + AT_rich Low_complexity Low_complexity 1 36 0 248 70 23 0 chr2 86509716 86509759 -166746824 + (TA)n Simple_repeat Simple_repeat 2 45 0 440 296 43 2 chr2 86509794 86509984 -166746599 + L1M2 LINE L1 50 280 -6558 1525 244 74 57 chr2 86510056 86511081 -166745502 - L1MEc LINE L1 -3283 2932 1906 33 0 0 0 chr2 86511082 86511115 -166745468 + AT_rich Low_complexity Low_complexity 1 33 0 549 44 0 0 chr2 86512661 86512729 -166743854 + (CA)n Simple_repeat Simple_repeat 1 68 0 183 80 0 0 chr2 86512793 86512818 -166743765 + (T)n Simple_repeat Simple_repeat 1 25 0 198 113 32 32 chr2 86513220 86513282 -166743301 + (TTTA)n Simple_repeat Simple_repeat 2 63 0 27 0 0 0 chr2 86513335 86513362 -166743221 + AT_rich Low_complexity Low_complexity 1 27 0 201 213 0 0 chr2 86514191 86514238 -166742345 + (TATG)n Simple_repeat Simple_repeat 2 48 0 237 291 0 0 chr2 86514696 86514751 -166741832 + L2 LINE L2 3218 3272 0 2484 138 28 13 chr2 86515384 86515774 -166740809 + MSTA LTR MaLR 30 425 -3 751 160 0 0 chr2 86515774 86515893 -166740690 - FRAM SINE Alu -33 143 25 855 151 6 93 chr2 86515973 86516145 -166740438 - FRAM SINE Alu -14 162 6 215 40 0 0 chr2 86517346 86517371 -166739212 + (T)n Simple_repeat Simple_repeat 1 25 0 617 172 60 0 chr2 86517739 86517855 -166738728 + MER57A LTR ERV1 1 123 -280 570 184 43 64 chr2 86517867 86518008 -166738575 + L1M1 LINE L1 14 151 -7414 2509 177 9 20 chr2 86518014 86518568 -166738015 + L1M1 LINE L1 1750 2520 -5045 * 5745 169 31 56 chr2 86518567 86520178 -166736405 + L1M1 LINE L1 5514 7070 -654 877 176 5 85 chr2 86520208 86520396 -166736187 - Tigger2 DNA MER2_type -1 2717 2545 392 52 35 0 chr2 86520445 86520503 -166736080 + Tigger2 DNA MER2_type 2495 2554 -164 13369 159 21 23 chr2 86520647 86523064 -166733519 - Tigger2 DNA MER2_type -306 2412 2 369 371 50 0 chr2 86523483 86523685 -166732898 + MIR SINE MIR 51 262 0 184 303 79 66 chr2 86523747 86523899 -166732684 + L2 LINE L2 3159 3312 -1 578 211 45 39 chr2 86524449 86524605 -166731978 + MER3 DNA MER1_type 53 209 0 1719 203 28 14 chr2 86525803 86526158 -166730425 - MLT1A1 LTR MaLR -4 361 2 353 326 65 88 chr2 86527650 86527990 -166728593 - L3 LINE CR1 -127 1450 1119 707 296 18 29 chr2 86528205 86528482 -166728101 - MER67D LTR ERV1 -38 476 203 345 54 108 0 chr2 86528485 86528596 -166727987 + (TA)n Simple_repeat Simple_repeat 2 124 0 3443 34 0 0 chr2 86528597 86529007 -166727576 - L1PA5 LINE L1 -14 6140 5731 1464 56 0 0 chr2 86529007 86529185 -166727398 + L1PA5 LINE L1 5535 5712 -442 829 159 76 93 chr2 86529185 86529410 -166727173 - MER67D LTR ERV1 -300 214 1 200 205 0 0 chr2 86530028 86530067 -166726516 + A-rich Low_complexity Low_complexity 2 40 0 293 369 56 30 chr2 86531408 86531606 -166724977 - L2 LINE L2 -527 2787 2585 406 399 13 56 chr2 86533624 86534000 -166722583 + L2 LINE L2 2900 3259 -13 264 59 0 0 chr2 86534495 86534529 -166722054 + (TG)n Simple_repeat Simple_repeat 2 35 0 22 0 0 0 chr2 86534750 86534772 -166721811 + AT_rich Low_complexity Low_complexity 1 22 0 482 326 14 0 chr2 86534861 86534999 -166721584 - MIR SINE MIR -71 191 52 325 299 153 7 chr2 86535069 86535206 -166721377 - L2 LINE L2 0 3272 3116 25 31 0 0 chr2 86535555 86535587 -166720996 + AT_rich Low_complexity Low_complexity 1 32 0 2102 119 3 13 chr2 86535883 86536194 -166720389 - AluSq SINE Alu -4 309 2 235 218 36 0 chr2 86537459 86537514 -166719069 + (TATG)n Simple_repeat Simple_repeat 3 59 0 2185 98 3 0 chr2 86537688 86537974 -166718609 + AluSq SINE Alu 1 287 -26 32 81 0 0 chr2 86538100 86538174 -166718409 + AT_rich Low_complexity Low_complexity 1 74 0 2263 71 26 13 chr2 86538313 86538622 -166717961 - AluSq SINE Alu 0 313 1 25 0 0 0 chr2 86538679 86538704 -166717879 + AT_rich Low_complexity Low_complexity 1 25 0 451 304 92 45 chr2 86538858 86539259 -166717324 + L1MCc LINE L1 4 423 -6000 230 303 53 0 chr2 86539545 86539621 -166716962 + L1MCc LINE L1 837 916 -5507 1439 78 0 0 chr2 86539625 86539805 -166716778 - AluSq SINE Alu -133 180 1 1888 214 113 5 chr2 86539900 86540451 -166716132 + L1MCc LINE L1 1108 1717 -5227 847 220 26 83 chr2 86540525 86540789 -166715794 + L1MD2 LINE L1 6102 6350 -9 346 303 103 43 chr2 86540789 86541005 -166715578 + L1ME2 LINE L1 5318 5551 -615 345 195 90 58 chr2 86541078 86541217 -166715366 + MER41B LTR ERV1 168 341 -251 * 1052 165 98 114 chr2 86541192 86541507 -166715076 + MER66A LTR ERV1 169 478 0 941 192 78 10 chr2 86541559 86541752 -166714831 + MER20 DNA MER1_type 1 206 -13 1036 268 51 26 chr2 86541755 86542170 -166714413 + L1ME2 LINE L1 5628 6052 -112 4779 164 23 12 chr2 86542171 86542287 -166714296 - Tigger1 DNA MER2_type -2 2416 2303 2367 75 0 0 chr2 86542287 86542579 -166714004 + AluY SINE Alu 1 292 -19 4779 164 23 12 chr2 86542579 86543304 -166713279 - Tigger1 DNA MER2_type -115 2303 1566 3803 154 19 88 chr2 86543304 86544813 -166711770 - pTR5 LTR ERV1 0 2606 1524 8719 151 50 12 chr2 86544813 86546328 -166710255 - Tigger1 DNA MER2_type -847 1571 1 342 339 165 8 chr2 86546512 86546754 -166709829 + L2 LINE L2 3033 3312 -1 24 53 0 0 chr2 86547106 86547144 -166709439 + AT_rich Low_complexity Low_complexity 1 38 0 367 324 92 12 chr2 86547351 86547524 -166709059 - MIR SINE MIR -29 233 47 215 312 86 11 chr2 86548963 86549056 -166707527 + L2 LINE L2 2395 2494 -820 3271 198 29 39 chr2 86549121 86550012 -166706571 - L1MA9 LINE L1 0 6312 5431 210 91 0 0 chr2 86550012 86550045 -166706538 + (TA)n Simple_repeat Simple_repeat 2 34 0 28446 116 16 56 chr2 86550045 86550061 -166706522 - L1PA7 LINE L1 -5 6149 6134 243 0 0 0 chr2 86550061 86550088 -166706495 + (TC)n Simple_repeat Simple_repeat 2 28 0 28446 116 16 56 chr2 86550088 86552290 -166704293 - L1PA7 LINE L1 -20 6134 3846 2291 116 3 0 chr2 86552290 86552600 -166703983 - AluSp SINE Alu -2 311 1 28446 116 16 56 chr2 86552600 86556784 -166699799 - L1PA7 LINE L1 -2308 3846 12 530 221 13 13 chr2 86556795 86556953 -166699630 - L1MA9 LINE L1 -880 5432 5275 3706 157 32 10 chr2 86657815 86658505 -166598078 - L1MC1 LINE L1 -18 6315 5611 23 54 0 0 chr2 86659483 86659520 -166597063 + AT_rich Low_complexity Low_complexity 1 37 0 260 189 27 27 chr2 86659557 86659631 -166596952 + (TTAG)n Simple_repeat Simple_repeat 3 76 0 533 354 67 4 chr2 86660034 86660274 -166596309 + MIR SINE MIR 2 256 -6 1712 172 21 0 chr2 86660987 86661109 -166595474 + AluSx SINE Alu 1 119 -193 240 35 0 0 chr2 86661109 86661138 -166595445 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1712 172 21 0 chr2 86661138 86661294 -166595289 + AluSx SINE Alu 119 285 -27 338 344 73 10 chr2 86661311 86661503 -166595080 - L1M4 LINE L1 -1917 4229 4026 216 67 0 0 chr2 86662888 86662918 -166593665 + (CA)n Simple_repeat Simple_repeat 2 31 0 21 0 0 0 chr2 86663648 86663669 -166592914 + AT_rich Low_complexity Low_complexity 1 21 0 2494 62 0 0 chr2 86663789 86664098 -166592485 - AluY SINE Alu -2 309 1 193 382 42 25 chr2 86664973 86665214 -166591369 + L3 LINE CR1 564 808 -769 2240 99 0 0 chr2 86665793 86666086 -166590497 + AluY SINE Alu 1 293 -18 24 0 0 0 chr2 86666086 86666110 -166590473 + AT_rich Low_complexity Low_complexity 1 24 0 2773 168 42 14 chr2 86666223 86667230 -166589353 - L1PB4 LINE L1 -425 5731 4707 1797 162 130 8 chr2 86667228 86667272 -166589311 + L1PB4 LINE L1 5741 5778 -378 * 387 0 0 0 chr2 86667272 86667315 -166589268 + (CA)n Simple_repeat Simple_repeat 2 44 0 1797 162 130 8 chr2 86667315 86667640 -166588943 + L1PB4 LINE L1 5778 6155 -1 25 31 0 0 chr2 86667667 86667699 -166588884 + AT_rich Low_complexity Low_complexity 1 32 0 620 158 0 0 chr2 86669284 86669385 -166587198 - LTR12 LTR ERV1 -133 581 481 312 242 11 0 chr2 86669386 86669481 -166587102 - LTR30 LTR ERV1 -79 643 548 1021 156 52 80 chr2 86669482 86669786 -166586797 - LTR12 LTR ERV1 -410 2028 53 225 235 20 0 chr2 86669786 86669837 -166586746 - LTR30 LTR ERV1 -670 52 1 1783 126 7 18 chr2 86669837 86670114 -166586469 + AluSx SINE Alu 31 304 -8 208 300 195 19 chr2 86670266 86670476 -166586107 - MIR SINE MIR 0 262 16 297 51 0 0 chr2 86670536 86670575 -166586008 + (CA)n Simple_repeat Simple_repeat 2 40 0 282 221 12 0 chr2 86671708 86671794 -166584789 + (TAA)n Simple_repeat Simple_repeat 2 88 0 1364 202 8 15 chr2 86671802 86672069 -166584514 - AluJb SINE Alu -45 267 3 23 54 0 0 chr2 86672071 86672108 -166584475 + AT_rich Low_complexity Low_complexity 1 37 0 2515 279 80 44 chr2 86672167 86673274 -166583309 - L1M1 LINE L1 -5624 1941 1 1390 233 57 10 chr2 86673258 86674338 -166582245 + L1 LINE L1 2544 3701 -2445 * 1926 193 51 47 chr2 86674442 86675260 -166581323 - L1MC/D LINE L1 -743 5403 4735 1883 151 0 7 chr2 86675287 86675586 -166580997 - AluSx SINE Alu -15 297 1 1834 248 16 41 chr2 86675587 86675728 -166580855 - L1MC/D LINE L1 -1401 4745 4602 2268 111 0 0 chr2 86675728 86676026 -166580557 - AluSc SINE Alu -11 298 1 1834 248 16 41 chr2 86676026 86676518 -166580065 - L1MC/D LINE L1 -1544 4602 4128 257 310 75 43 chr2 86676872 86677059 -166579524 - MIR SINE MIR -34 228 36 231 333 0 0 chr2 86677367 86677451 -166579132 - MER117 DNA MER1_type -112 85 2 21 0 0 0 chr2 86677529 86677550 -166579033 + AT_rich Low_complexity Low_complexity 1 21 0 626 199 7 29 chr2 86677773 86677909 -166578674 + FLAM_A SINE Alu 1 133 0 315 161 0 0 chr2 86677920 86677976 -166578607 + GA-rich Low_complexity Low_complexity 1 56 0 24 0 0 0 chr2 86678361 86678385 -166578198 + AT_rich Low_complexity Low_complexity 1 24 0 27 29 0 0 chr2 86678894 86678928 -166577655 + AT_rich Low_complexity Low_complexity 1 34 0 1947 158 60 62 chr2 86679064 86679398 -166577185 - MSTC LTR MaLR -12 416 83 2155 91 0 48 chr2 86679398 86679707 -166576876 + AluSc SINE Alu 1 294 -15 2226 63 42 0 chr2 86679707 86679994 -166576589 + AluY SINE Alu 1 299 -12 1947 158 60 62 chr2 86679994 86680075 -166576508 - MSTC LTR MaLR -343 85 1 301 325 46 20 chr2 86680081 86680232 -166576351 + L1M4 LINE L1 4883 5037 -1109 1853 161 0 3 chr2 86680235 86680526 -166576057 + AluSx SINE Alu 2 291 -21 7224 247 80 23 chr2 86680556 86684710 -166571873 + L1MC3 LINE L1 2504 6972 -813 213 108 0 0 chr2 86684710 86684747 -166571836 + (CA)n Simple_repeat Simple_repeat 2 38 0 7224 247 80 23 chr2 86684747 86685436 -166571147 + L1MC3 LINE L1 6972 7620 -165 582 260 46 27 chr2 86685445 86685726 -166570857 + L1M4 LINE L1 5136 5426 -740 253 324 14 0 chr2 86685846 86685920 -166570663 + MIR3 SINE MIR 115 189 -19 1091 296 118 28 chr2 86687144 86687687 -166568896 + MLT1E LTR MaLR 1 548 -1 2983 186 52 133 chr2 86688417 86688568 -166568015 + L1MC3 LINE L1 6701 6863 -922 207 0 0 0 chr2 86688568 86688591 -166567992 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 2983 186 52 133 chr2 86688591 86689441 -166567142 + L1MC3 LINE L1 6863 7621 -164 23 33 0 0 chr2 86689699 86689729 -166566854 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr2 86690307 86690335 -166566248 + AT_rich Low_complexity Low_complexity 1 28 0 283 292 97 0 chr2 86692930 86693043 -166563540 + MLT1L LTR MaLR 149 272 -343 216 67 0 0 chr2 86693149 86693179 -166563404 + (TTA)n Simple_repeat Simple_repeat 1 30 0 375 239 35 26 chr2 86695339 86695452 -166561131 + MER81 DNA DNA 1 114 0 2544 271 56 9 chr2 86695635 86696540 -166560043 + L1M4 LINE L1 3786 4733 -1413 2080 110 0 20 chr2 86696833 86697133 -166559450 - AluSg SINE Alu -16 294 1 21 0 0 0 chr2 86697190 86697211 -166559372 + AT_rich Low_complexity Low_complexity 1 21 0 344 385 31 11 chr2 86697445 86697731 -166558852 + LTR16C LTR ERVL 195 486 -5 477 222 14 99 chr2 86697927 86698139 -166558444 - L1ME2 LINE L1 -106 6058 5865 973 236 20 5 chr2 86698143 86698346 -166558237 - MLT1A1 LTR MaLR -2 363 158 195 0 39 0 chr2 86698917 86698943 -166557640 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2218 102 0 3 chr2 86698943 86699228 -166557355 - AluSp SINE Alu -29 284 1 259 304 65 0 chr2 86699725 86699817 -166556766 - MIR SINE MIR -128 134 37 24 0 0 0 chr2 86699817 86699841 -166556742 + AT_rich Low_complexity Low_complexity 1 24 0 1402 154 43 24 chr2 86700273 86700526 -166556057 - AluSx SINE Alu -12 300 43 2281 88 3 3 chr2 86700628 86700924 -166555659 + AluY SINE Alu 1 296 -15 520 288 56 20 chr2 86701028 86701226 -166555357 + MLT1I LTR MaLR 5 209 -200 1954 182 49 11 chr2 86701708 86702076 -166554507 + MSTB LTR MaLR 1 382 -44 266 297 10 10 chr2 86702108 86702209 -166554374 + L1M4 LINE L1 293 393 -6253 677 277 47 41 chr2 86702489 86702832 -166553751 + L1M4 LINE L1 820 1164 -5378 * 3630 253 30 26 chr2 86702829 86704124 -166552459 + L1M4 LINE L1 4253 5552 -1092 2326 83 0 3 chr2 86704125 86704425 -166552158 + AluY SINE Alu 1 299 -12 499 152 0 29 chr2 86704440 86704545 -166552038 - L1 LINE L1 -1839 4307 4206 * 2027 193 14 7 chr2 86704540 86704954 -166551629 + L1 LINE L1 4734 5150 -996 332 130 0 0 chr2 86704954 86705008 -166551575 - MLT2A2 LTR ERVL 0 453 400 393 185 0 48 chr2 86705031 86705220 -166551363 + (TA)n Simple_repeat Simple_repeat 1 180 0 297 0 0 0 chr2 86705221 86705254 -166551329 + (CA)n Simple_repeat Simple_repeat 2 34 0 2793 123 15 5 chr2 86705254 86705654 -166550929 - MLT2A2 LTR ERVL -49 404 1 639 216 94 0 chr2 86705654 86705835 -166550748 + L1 LINE L1 5146 5343 -803 2116 129 0 3 chr2 86705838 86706133 -166550450 + AluSg SINE Alu 1 294 -16 22 0 0 0 chr2 86706163 86706185 -166550398 + AT_rich Low_complexity Low_complexity 1 22 0 2364 89 0 0 chr2 86706557 86706860 -166549723 - AluY SINE Alu -8 303 1 860 199 153 106 chr2 86707007 86707450 -166549133 - MLT1C LTR MaLR 0 467 4 1175 157 11 0 chr2 86708212 86708403 -166548180 - AluYa5 SINE Alu -16 295 103 3293 126 256 25 chr2 86708403 86709698 -166546885 - pTR5 LTR ERV1 0 2606 1524 663 124 0 44 chr2 86709698 86709811 -166546772 - AluSq/x SINE Alu -205 108 1 2355 86 0 7 chr2 86711047 86711349 -166545234 + AluY SINE Alu 1 300 -11 22 0 0 0 chr2 86712303 86712325 -166544258 + AT_rich Low_complexity Low_complexity 1 22 0 205 353 49 20 chr2 86712885 86712987 -166543596 + MIR SINE MIR 32 136 -72 699 158 0 25 chr2 86712989 86713109 -166543474 + MLT1B LTR MaLR 274 390 0 816 310 13 4 chr2 86716010 86716239 -166540344 + MIR SINE MIR 2 232 -30 1182 210 15 11 chr2 86716242 86716514 -166540069 - L1MB8 LINE L1 -29 6149 5877 21 0 0 0 chr2 86716547 86716568 -166540015 + AT_rich Low_complexity Low_complexity 1 21 0 853 215 0 40 chr2 86717229 86717322 -166539261 - MLT1C LTR MaLR 0 467 383 1813 129 120 20 chr2 86717322 86717663 -166538920 + THE1C LTR MaLR 1 375 0 853 215 0 40 chr2 86717663 86717746 -166538837 - MLT1C LTR MaLR -84 383 298 227 253 108 12 chr2 86717742 86717825 -166538758 - MLT1B LTR MaLR -203 264 174 * 235 255 0 0 chr2 86717875 86717926 -166538657 - MLT1B LTR MaLR -339 51 1 272 249 37 27 chr2 86718184 86718299 -166538284 - MIR SINE MIR -64 144 72 583 205 24 16 chr2 86718392 86718519 -166538064 + FLAM_C SINE Alu 4 131 -2 576 246 67 52 chr2 86718693 86719096 -166537487 + MLT1D LTR MaLR 1 390 0 495 213 28 0 chr2 86719100 86719208 -166537375 + MLT1D-int LTR MaLR 5 115 -1620 919 257 15 38 chr2 86719238 86719569 -166537014 + MLT1D-int LTR MaLR 471 884 -487 2433 81 0 3 chr2 86719648 86719956 -166536627 + AluY SINE Alu 5 311 0 493 309 0 0 chr2 86720145 86720268 -166536315 + MLT1D-int LTR MaLR 1316 1438 -297 * 954 218 6 33 chr2 86720262 86720591 -166535992 - MLT1B-int LTR MaLR -925 446 1 1553 218 39 26 chr2 86720591 86720976 -166535607 - MLT1B LTR MaLR 0 390 1 2089 120 10 3 chr2 86721073 86721372 -166535211 - AluSc SINE Alu -8 301 1 2145 131 0 6 chr2 86722118 86722432 -166534151 + AluSx SINE Alu 1 312 0 216 0 0 0 chr2 86723501 86723525 -166533058 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 27 62 0 0 chr2 86724069 86724117 -166532466 + AT_rich Low_complexity Low_complexity 1 48 0 26 82 0 0 chr2 86724397 86724458 -166532125 + AT_rich Low_complexity Low_complexity 1 61 0 189 0 0 0 chr2 86725124 86725145 -166531438 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 632 330 14 0 chr2 86725791 86726003 -166530580 + L1MDa LINE L1 44 258 -6282 3862 269 112 5 chr2 86726007 86727415 -166529168 + L1MDa LINE L1 420 1977 -4563 855 239 24 20 chr2 86727416 86727671 -166528912 - L1M4 LINE L1 -2065 4081 3826 2432 79 0 0 chr2 86728205 86728509 -166528074 + AluY SINE Alu 1 304 -7 225 154 0 39 chr2 86729501 86729553 -166527030 + (TAA)n Simple_repeat Simple_repeat 3 52 0 416 300 36 7 chr2 86729566 86729706 -166526877 - MIR SINE MIR -6 256 113 2136 88 4 0 chr2 86730549 86730823 -166525760 + AluSc SINE Alu 26 300 -9 558 235 6 48 chr2 86731408 86731574 -166525009 - Charlie4 DNA MER1_type 0 1961 1803 317 47 0 0 chr2 86732513 86732556 -166524027 - MADE1 DNA Mariner -37 43 1 616 266 17 12 chr2 86733134 86733307 -166523276 - MER45A DNA AcHobo -3 175 2 2477 90 34 0 chr2 86733725 86734079 -166522504 - L1PB1 LINE L1 -1 6150 5785 282 179 0 0 chr2 86734083 86734139 -166522444 + (TA)n Simple_repeat Simple_repeat 2 57 0 244 202 21 64 chr2 86734139 86734233 -166522350 - L1MC4 LINE L1 -1339 6703 6614 * 3653 104 4 6 chr2 86734231 86734788 -166521795 - L1P5 LINE L1 -361 5790 5235 1864 162 14 0 chr2 86734799 86735089 -166521494 - AluSx SINE Alu -16 296 3 612 194 0 0 chr2 86736659 86736783 -166519800 + (TG)n Simple_repeat Simple_repeat 2 125 0 1975 130 0 0 chr2 86738139 86738415 -166518168 + AluSq SINE Alu 2 277 -36 2102 115 3 3 chr2 86738442 86738730 -166517853 + AluY SINE Alu 1 288 -23 279 0 0 0 chr2 86738731 86738762 -166517821 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 251 300 38 0 chr2 86738780 86738860 -166517723 - MIR SINE MIR -105 157 75 593 189 31 127 chr2 86739134 86739362 -166517221 + MER3 DNA MER1_type 3 208 -1 189 74 0 0 chr2 86739391 86739418 -166517165 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 324 359 16 8 chr2 86739920 86740048 -166516535 - MLT1I LTR MaLR -210 199 71 2202 125 11 40 chr2 86741173 86741526 -166515057 - MER61A LTR ERV1 0 343 1 1873 129 7 4 chr2 86741797 86742117 -166514466 + AluSc SINE Alu 1 321 0 606 271 102 5 chr2 86743463 86743876 -166512707 + L1M4 LINE L1 3079 3531 -2615 1114 187 20 24 chr2 86743877 86743959 -166512624 - L1 LINE L1 -1893 4253 4172 2006 153 30 33 chr2 86743959 86744324 -166512259 + THE1B LTR MaLR 1 364 0 1114 187 20 24 chr2 86744324 86744487 -166512096 - L1 LINE L1 -1974 4172 4009 700 222 6 60 chr2 86744489 86744656 -166511927 - FRAM SINE Alu -18 158 1 611 250 19 43 chr2 86744921 86745129 -166511454 - MER3 DNA MER1_type -6 203 1 2476 46 7 3 chr2 86745486 86745793 -166510790 - AluY SINE Alu -3 308 1 552 45 34 0 chr2 86746006 86746094 -166510489 + (TAGA)n Simple_repeat Simple_repeat 3 93 0 889 231 109 14 chr2 86746226 86746510 -166510073 + MER57A LTR ERV1 104 400 -3 219 289 67 39 chr2 86746625 86746729 -166509854 - L2 LINE L2 -10 3303 3197 1655 165 37 60 chr2 86746731 86747082 -166509501 - MER61A LTR ERV1 0 343 1 1687 180 27 27 chr2 86747108 86747436 -166509147 + MLT2D LTR ERVL 1 328 -86 2092 117 10 16 chr2 86747648 86747957 -166508626 - AluSq SINE Alu -6 307 1 685 122 0 0 chr2 86748409 86748507 -166508076 + AluSg SINE Alu 1 98 -212 1892 102 0 19 chr2 86748508 86748772 -166507811 + AluSg SINE Alu 52 310 0 2395 63 0 0 chr2 86749344 86749651 -166506932 - AluY SINE Alu 0 307 1 2188 98 9 29 chr2 86751270 86751585 -166504998 + AluSx SINE Alu 1 309 -3 21 36 0 0 chr2 86752432 86752460 -166504123 + AT_rich Low_complexity Low_complexity 1 28 0 836 250 20 5 chr2 86752474 86752670 -166503913 + MER20 DNA MER1_type 14 212 -7 1857 144 66 74 chr2 86752711 86753224 -166503359 + LTR4 LTR ERV1 101 596 0 305 224 30 0 chr2 86753323 86753390 -166503193 - MSTC LTR MaLR -305 123 55 2156 123 13 0 chr2 86753444 86753752 -166502831 - AluSx SINE Alu 0 312 1 1490 177 52 49 chr2 86753795 86754090 -166502493 - MSTC-int LTR MaLR 0 1735 1437 2153 120 6 19 chr2 86754090 86754406 -166502177 + AluSq SINE Alu 1 312 -1 1490 177 52 49 chr2 86754406 86754437 -166502146 - MSTC-int LTR MaLR -298 1437 1408 543 213 0 0 chr2 86754439 86754575 -166502008 + GA-rich Low_complexity Low_complexity 1 136 0 1907 267 60 36 chr2 86754575 86755159 -166501424 - MSTC-int LTR MaLR -297 1438 841 304 268 59 100 chr2 86755319 86755539 -166501044 + L1ME3A LINE L1 5730 5940 -230 21 36 0 0 chr2 86755736 86755764 -166500819 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr2 86756579 86756604 -166499979 + AT_rich Low_complexity Low_complexity 1 25 0 2494 54 0 0 chr2 86757395 86757692 -166498891 + AluY SINE Alu 1 297 -14 513 239 153 9 chr2 86757875 86758095 -166498488 - MER110A LTR ERV1 -3 465 259 2023 103 10 33 chr2 86758180 86758482 -166498101 - AluY SINE Alu -15 296 2 21 71 0 0 chr2 86758564 86758606 -166497977 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr2 86758947 86758970 -166497613 + AT_rich Low_complexity Low_complexity 1 23 0 2446 170 29 11 chr2 86759030 86759483 -166497100 - LOR1b LTR ERV1 0 461 1 2747 152 9 0 chr2 86759640 86760088 -166496495 - LOR1a LTR ERV1 0 497 46 23 0 0 0 chr2 86760095 86760118 -166496465 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 86760280 86760301 -166496282 + AT_rich Low_complexity Low_complexity 1 21 0 2439 74 0 0 chr2 86760362 86760659 -166495924 + AluY SINE Alu 1 297 -14 350 302 86 43 chr2 86760820 86761194 -166495389 + L1ME LINE L1 4580 4969 -1177 27 29 0 0 chr2 86761377 86761411 -166495172 + AT_rich Low_complexity Low_complexity 1 34 0 531 306 99 22 chr2 86761440 86761852 -166494731 + L1ME LINE L1 5258 5701 -461 877 315 154 8 chr2 86761892 86762374 -166494209 - MLT1F1 LTR MaLR 0 567 17 2014 90 0 105 chr2 86762374 86762718 -166493865 - AluSc SINE Alu -1 308 1 275 323 75 12 chr2 86762735 86762829 -166493754 + L1ME LINE L1 5719 5829 -341 2294 74 3 7 chr2 86762829 86763125 -166493458 + AluY SINE Alu 1 295 -16 275 323 75 12 chr2 86763125 86763191 -166493392 + L1ME LINE L1 5829 5889 -281 261 0 0 0 chr2 86763304 86763333 -166493250 + (T)n Simple_repeat Simple_repeat 1 29 0 23 68 0 0 chr2 86763499 86763543 -166493040 + AT_rich Low_complexity Low_complexity 1 44 0 903 261 85 64 chr2 86766170 86766519 -166490064 + MLT1J1 LTR MaLR 42 401 -45 1420 169 25 75 chr2 86766519 86766838 -166489745 + AluJb SINE Alu 1 303 -9 903 261 85 64 chr2 86766838 86766864 -166489719 + MLT1J1 LTR MaLR 401 425 -21 2055 129 18 49 chr2 86767505 86767892 -166488691 - THE1C LTR MaLR 0 375 1 1897 198 19 75 chr2 86768447 86768983 -166487600 + MER67D LTR ERV1 5 510 -4 412 250 0 0 chr2 86769126 86769202 -166487381 - MER30 DNA MER1_type -2 228 153 * 1182 148 15 0 chr2 86769195 86769391 -166487192 - MER30 DNA MER1_type -31 199 1 258 260 40 102 chr2 86770068 86770245 -166486338 - L2 LINE L2 0 3313 3148 205 93 37 37 chr2 86771480 86771534 -166485049 + T-rich Low_complexity Low_complexity 4 57 0 926 210 87 17 chr2 86772287 86772587 -166483996 - MER33 DNA MER1_type 0 324 4 410 277 19 38 chr2 86773302 86773461 -166483122 + L2 LINE L2 3154 3309 -4 377 231 113 54 chr2 86774838 86775041 -166481542 - LTR37B LTR ERV1 0 468 254 313 219 96 34 chr2 86775186 86775332 -166481251 - LTR37B LTR ERV1 -306 162 8 258 313 41 102 chr2 86777365 86777512 -166479071 - MIR3 SINE MIR -29 179 42 2353 96 0 0 chr2 86777611 86777912 -166478671 - AluSx SINE Alu -11 301 1 5572 137 8 20 chr2 86778793 86779911 -166476672 - L1PA15 LINE L1 -2 6163 5052 391 384 34 71 chr2 86780857 86781211 -166475372 - L2 LINE L2 -13 3259 2919 598 253 16 43 chr2 86782517 86782703 -166473880 + MER58A DNA MER1_type 44 224 0 297 331 58 7 chr2 86783037 86783176 -166473407 + MLT1J2 LTR MaLR 24 169 -281 233 316 72 39 chr2 86783750 86784136 -166472447 - L1MEc LINE L1 -4732 1664 1266 2155 104 3 10 chr2 86784311 86784610 -166471973 - AluSg SINE Alu -13 297 1 305 295 101 22 chr2 86785526 86785753 -166470830 - HAL1 LINE L1 -1519 988 744 287 200 0 13 chr2 86786732 86786807 -166469776 + CT-rich Low_complexity Low_complexity 4 77 0 1049 98 0 0 chr2 86787322 86787476 -166469107 - AluSc SINE Alu 0 303 150 297 136 0 0 chr2 86787480 86787524 -166469059 - Alu SINE Alu -259 44 1 2246 121 0 0 chr2 86787524 86787831 -166468752 - AluSg SINE Alu -3 307 1 360 0 0 0 chr2 86788025 86788065 -166468518 + (CA)n Simple_repeat Simple_repeat 1 40 0 42895 30 22 1 chr2 86789410 86795435 -166461148 + L1PA2 LINE L1 1 6153 -2 186 71 0 0 chr2 86795443 86795471 -166461112 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 2342 284 84 48 chr2 86796039 86796144 -166460439 + L1MEc LINE L1 28 128 -6268 539 210 0 98 chr2 86796144 86796287 -166460296 + FLAM_A SINE Alu 1 129 -4 2342 284 84 48 chr2 86796287 86796926 -166459657 + L1MEc LINE L1 128 742 -5654 1927 140 3 0 chr2 86796926 86797255 -166459328 + AluSq SINE Alu 1 330 0 2342 284 84 48 chr2 86797255 86797812 -166458771 + L1MEc LINE L1 742 1379 -5017 858 239 47 94 chr2 86797841 86798246 -166458337 - L1MD3 LINE L1 -797 7198 6813 2669 36 0 3 chr2 86798254 86798561 -166458022 - AluY SINE Alu -5 306 1 897 238 107 45 chr2 86798603 86799102 -166457481 - L1MC4a LINE L1 -1213 6595 6061 1737 279 72 28 chr2 86799109 86800242 -166456341 + L1M4 LINE L1 2984 4166 -1980 1280 159 176 30 chr2 86800369 86800802 -166455781 - LTR54B LTR ERV1 -2 496 1 244 0 0 0 chr2 86800928 86800956 -166455627 - L1PA8 LINE L1 -447 5725 5698 3305 53 2 0 chr2 86800956 86801373 -166455210 + L1PA8 LINE L1 5742 6159 -13 44 0 0 0 chr2 86801373 86801417 -166455166 + AT_rich Low_complexity Low_complexity 1 44 0 584 177 6 0 chr2 86801417 86801592 -166454991 + (TA)n Simple_repeat Simple_repeat 2 177 0 5835 67 15 13 chr2 86801998 86802776 -166453807 + LTR17 LTR ERV1 1 780 0 24 67 0 0 chr2 86802791 86802836 -166453747 + AT_rich Low_complexity Low_complexity 1 45 0 28 35 0 35 chr2 86803022 86803040 -166453543 + AT_rich Low_complexity Low_complexity 1 18 -37 2278 115 0 0 chr2 86803040 86803352 -166453231 - AluSp SINE Alu -1 312 1 28 35 0 35 chr2 86803352 86803390 -166453193 + AT_rich Low_complexity Low_complexity 18 55 0 198 351 114 0 chr2 86803603 86803717 -166452866 + MIR SINE MIR 16 142 -66 2138 129 0 19 chr2 86803790 86804108 -166452475 - AluSx SINE Alu 0 312 1 25 31 0 0 chr2 86806069 86806101 -166450482 + AT_rich Low_complexity Low_complexity 1 32 0 383 276 39 8 chr2 86806661 86806788 -166449795 + MIR SINE MIR 70 200 -62 286 261 0 58 chr2 86807602 86807671 -166448912 + L2 LINE L2 3187 3251 -62 706 213 83 37 chr2 86807842 86808154 -166448429 - MSTD LTR MaLR -2 394 19 1130 96 5 48 chr2 86808534 86808722 -166447861 + L1PA13 LINE L1 5979 6158 -5 209 372 0 0 chr2 86809339 86809425 -166447158 - MIR SINE MIR -101 161 76 747 277 116 46 chr2 86809722 86810025 -166446558 - MLT1D LTR MaLR -91 414 91 594 196 52 135 chr2 86810025 86810255 -166446328 - MLT1D-int LTR MaLR -1 1370 1160 3589 107 0 4 chr2 86810343 86810856 -166445727 - MER9 LTR ERVK 0 511 1 207 114 0 0 chr2 86811083 86811118 -166445465 + (ATG)n Simple_repeat Simple_repeat 1 35 0 560 261 139 0 chr2 86811141 86811306 -166445277 - MIR SINE MIR -10 252 65 24 0 0 0 chr2 86813319 86813343 -166443240 + AT_rich Low_complexity Low_complexity 1 24 0 693 393 39 19 chr2 86815948 86816584 -166439999 - ERVL LTR ERVL -1247 4517 3869 281 409 14 9 chr2 86816747 86816962 -166439621 - ERVL LTR ERVL -2114 3650 3435 297 0 0 0 chr2 86818740 86818773 -166437810 + (CA)n Simple_repeat Simple_repeat 2 34 0 2210 116 3 0 chr2 86819231 86819541 -166437042 + AluSp SINE Alu 1 311 -2 218 123 15 46 chr2 86819781 86819846 -166436737 + (TA)n Simple_repeat Simple_repeat 2 64 0 21 0 0 0 chr2 86820543 86820564 -166436019 + AT_rich Low_complexity Low_complexity 1 21 0 1094 242 18 0 chr2 86821408 86821681 -166434902 - L1MD2 LINE L1 -24 6335 6058 * 2847 231 40 21 chr2 86821679 86821968 -166434615 + L1MD2 LINE L1 5307 5589 -770 1913 146 0 52 chr2 86821968 86822296 -166434287 - AluSx SINE Alu -1 311 1 2847 231 40 21 chr2 86822296 86822762 -166433821 + L1MD2 LINE L1 5589 6076 -283 207 315 28 9 chr2 86822870 86822978 -166433605 + (TA)n Simple_repeat Simple_repeat 2 111 0 378 117 21 21 chr2 86822979 86823073 -166433510 + (TCTA)n Simple_repeat Simple_repeat 1 94 0 22 0 0 0 chr2 86823619 86823641 -166432942 + AT_rich Low_complexity Low_complexity 1 22 0 354 305 85 29 chr2 86824240 86824510 -166432073 + L1ME LINE L1 5533 5796 -325 265 308 32 54 chr2 86824770 86824955 -166431628 + MLT1J LTR MaLR 98 278 -233 1967 101 49 3 chr2 86824958 86825245 -166431338 - AluY SINE Alu -11 300 1 240 232 20 40 chr2 86825992 86826091 -166430492 + CT-rich Low_complexity Low_complexity 3 99 0 1819 276 58 30 chr2 86826124 86826793 -166429790 - L1ME1 LINE L1 -44 6191 5506 1229 196 122 152 chr2 86826793 86827365 -166429218 + MLT1F1 LTR MaLR 1 555 -12 252 228 38 95 chr2 86827373 86827456 -166429127 - L1ME1 LINE L1 -733 5502 5431 1865 124 0 4 chr2 86827456 86827722 -166428861 - AluSg SINE Alu -45 265 1 252 228 38 95 chr2 86827722 86827796 -166428787 - L1ME1 LINE L1 -804 5431 5354 1210 272 53 36 chr2 86827798 86828471 -166428112 - L1ME1 LINE L1 -901 5314 4630 868 116 36 0 chr2 86828623 86828761 -166427822 + L1PA10 LINE L1 6026 6168 0 189 132 0 0 chr2 86828823 86828861 -166427722 + (T)n Simple_repeat Simple_repeat 1 38 0 629 284 69 34 chr2 86828893 86829489 -166427094 - L1ME1 LINE L1 -4811 1585 969 2024 123 0 3 chr2 86829921 86830205 -166426378 - AluSg SINE Alu -27 283 1 337 54 36 0 chr2 86830299 86830355 -166426228 + (GA)n Simple_repeat Simple_repeat 1 58 0 249 33 0 0 chr2 86831545 86831575 -166425008 + (TG)n Simple_repeat Simple_repeat 2 31 0 325 329 45 68 chr2 86831602 86831912 -166424671 - L2 LINE L2 -47 3266 2964 259 383 56 6 chr2 86832298 86832478 -166424105 + MIR SINE MIR 25 213 -49 30 0 0 0 chr2 86832701 86832731 -166423852 + AT_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr2 86833983 86834009 -166422574 + AT_rich Low_complexity Low_complexity 1 26 0 24 67 0 0 chr2 86835904 86835949 -166420634 + AT_rich Low_complexity Low_complexity 1 45 0 1751 134 3 69 chr2 86835956 86836262 -166420321 - AluSx SINE Alu -26 286 1 268 300 0 0 chr2 86837440 86837530 -166419053 + L1ME3A LINE L1 5682 5771 -2037 225 240 52 73 chr2 86837980 86838172 -166418411 + L1ME LINE L1 5301 5488 -676 1367 269 83 40 chr2 86838173 86838856 -166417727 + L1ME LINE L1 56 768 -5302 493 68 86 18 chr2 86838871 86839034 -166417549 + (TA)n Simple_repeat Simple_repeat 1 174 0 30 0 0 0 chr2 86839034 86839064 -166417519 + AT_rich Low_complexity Low_complexity 1 30 0 694 70 58 6 chr2 86839064 86839235 -166417348 + (TA)n Simple_repeat Simple_repeat 1 180 0 33 0 0 0 chr2 86839235 86839268 -166417315 + AT_rich Low_complexity Low_complexity 1 33 0 593 78 78 0 chr2 86839268 86839434 -166417149 + (TA)n Simple_repeat Simple_repeat 1 179 0 296 276 64 70 chr2 86839443 86839788 -166416795 + L1ME LINE L1 810 1103 -4977 375 247 53 47 chr2 86839815 86839965 -166416618 + L1ME3A LINE L1 6019 6169 -1 * 396 294 37 28 chr2 86839961 86840198 -166416385 + L1MCa LINE L1 1 206 -5839 261 0 0 0 chr2 86840217 86840246 -166416337 + (TA)n Simple_repeat Simple_repeat 2 30 0 * 330 26 0 0 chr2 86840245 86840284 -166416299 + (GA)n Simple_repeat Simple_repeat 2 40 0 233 234 0 0 chr2 86840296 86840343 -166416240 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 213 65 0 0 chr2 86840345 86840376 -166416207 + (GA)n Simple_repeat Simple_repeat 2 32 0 1649 174 7 4 chr2 86840376 86840652 -166415931 - AluJo SINE Alu -30 282 6 1252 240 46 97 chr2 86841023 86841556 -166415027 + L1MCa LINE L1 573 1070 -4975 1992 116 18 0 chr2 86841556 86841853 -166414730 + AluSc SINE Alu 1 302 0 1252 240 46 97 chr2 86841853 86841967 -166414616 + L1MCa LINE L1 1070 1188 -4857 * 7957 228 64 28 chr2 86841965 86844252 -166412331 + L1MC3 LINE L1 5272 7639 -146 652 200 7 30 chr2 86844252 86844387 -166412196 + FLAM_A SINE Alu 1 132 -1 361 156 26 0 chr2 86844388 86844465 -166412118 + GA-rich Low_complexity Low_complexity 1 79 0 578 214 62 0 chr2 86844477 86844622 -166411961 + L1MC3 LINE L1 7631 7784 -1 252 77 0 0 chr2 86844917 86844956 -166411627 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 376 303 69 56 chr2 86845253 86845484 -166411099 - L1MC4a LINE L1 -1703 6105 5872 929 248 9 5 chr2 86847636 86847854 -166408729 - MER20 DNA MER1_type 0 219 1 2195 177 64 30 chr2 86848112 86848582 -166408001 + MER66B LTR ERV1 1 486 0 319 269 0 46 chr2 86848724 86848832 -166407751 + L1MC4 LINE L1 6600 6702 -1340 * 335 227 14 61 chr2 86848745 86848890 -166407693 - L1MC4 LINE L1 -1339 6703 6604 213 151 0 0 chr2 86848892 86848945 -166407638 + (TA)n Simple_repeat Simple_repeat 2 54 0 305 283 30 0 chr2 86848945 86849044 -166407539 - L1MC4 LINE L1 -1337 6705 6604 305 245 20 39 chr2 86849056 86849158 -166407425 - L1MC4 LINE L1 -1339 6703 6604 301 255 0 43 chr2 86849144 86849238 -166407345 - L1MC4 LINE L1 -1339 6703 6614 * 312 269 0 39 chr2 86849246 86849350 -166407233 - L1MC4 LINE L1 -1339 6703 6604 306 231 22 44 chr2 86849386 86849477 -166407106 - L1MC4 LINE L1 -1339 6703 6615 192 77 0 0 chr2 86849481 86849507 -166407076 + (CTTG)n Simple_repeat Simple_repeat 2 27 0 2121 119 0 0 chr2 86849507 86849792 -166406791 - AluSx SINE Alu -27 285 1 228 122 0 0 chr2 86850355 86850396 -166406187 + (A)n Simple_repeat Simple_repeat 1 41 0 207 0 0 0 chr2 86850461 86850484 -166406099 + (T)n Simple_repeat Simple_repeat 1 23 0 833 247 48 9 chr2 86850929 86851160 -166405423 + LTR16A1 LTR ERVL 218 457 0 181 229 82 33 chr2 86852224 86852285 -166404298 - L2 LINE L2 -2629 685 622 22 35 0 0 chr2 86852735 86852764 -166403819 + AT_rich Low_complexity Low_complexity 1 29 0 288 167 0 0 chr2 86853100 86853160 -166403423 - L1PB4 LINE L1 -2 6154 6095 189 375 36 9 chr2 86853174 86853286 -166403297 - MIR SINE MIR -28 234 120 496 214 58 13 chr2 86854196 86854275 -166402308 + L1MC5 LINE L1 7303 7377 -584 441 0 0 0 chr2 86854275 86854324 -166402259 + (CA)n Simple_repeat Simple_repeat 2 50 0 496 214 58 13 chr2 86854324 86854398 -166402185 + L1MC5 LINE L1 7377 7463 -498 188 239 42 0 chr2 86854433 86854504 -166402079 + (CAGAGA)n Simple_repeat Simple_repeat 2 75 0 411 208 169 103 chr2 86854573 86854859 -166401724 + L1MC5 LINE L1 7484 7804 -157 718 283 11 5 chr2 86854859 86855046 -166401537 - MER5A DNA MER1_type 0 189 2 411 208 169 103 chr2 86855046 86855149 -166401434 + L1MC5 LINE L1 7804 7899 -62 366 270 47 70 chr2 86855176 86855391 -166401192 + L1ME3A LINE L1 5927 6136 -34 211 150 25 0 chr2 86855467 86855507 -166401076 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 1147 386 58 39 chr2 86855639 86856359 -166400224 + L2 LINE L2 1748 2481 -833 1943 138 66 20 chr2 86856932 86857280 -166399303 + THE1B LTR MaLR 1 364 0 204 312 77 72 chr2 86857431 86857652 -166398931 + L2 LINE L2 2695 2916 -398 969 283 46 48 chr2 86857724 86858158 -166398425 - MLT1H1 LTR MaLR -122 433 1 192 40 0 0 chr2 86858491 86858516 -166398067 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 383 164 194 82 chr2 86858623 86858731 -166397852 - MER67D LTR ERV1 -3 511 384 1862 158 7 0 chr2 86858731 86859022 -166397561 + AluSx SINE Alu 5 297 -15 383 164 194 82 chr2 86859022 86859047 -166397536 - MER67D LTR ERV1 -130 384 363 226 169 28 42 chr2 86859161 86859232 -166397351 + (TATATG)n Simple_repeat Simple_repeat 3 72 0 505 298 75 5 chr2 86859700 86859888 -166396695 - L2 LINE L2 0 3313 3113 3125 101 11 37 chr2 86860783 86861248 -166395335 - MLT2A2 LTR ERVL 0 453 1 16849 77 30 10 chr2 86861258 86861320 -166395263 - HERVL-A2 LTR ERVL -10 5644 5585 2305 88 14 0 chr2 86861320 86861615 -166394968 + AluSx SINE Alu 1 299 -13 16849 77 30 10 chr2 86861615 86863818 -166392765 - HERVL-A2 LTR ERVL -69 5585 3333 2234 73 31 0 chr2 86864594 86864881 -166391702 - AluY SINE Alu -15 296 1 997 167 17 39 chr2 86864881 86865115 -166391468 - L1MC2 LINE L1 -15 6329 6101 1213 315 60 35 chr2 86865185 86866061 -166390522 - L2 LINE L2 0 3313 2424 390 182 204 62 chr2 86867193 86867489 -166389094 + MER33 DNA MER1_type 1 302 -22 187 272 12 150 chr2 86867553 86867726 -166388857 - L3 LINE CR1 -119 1458 1310 21 0 0 0 chr2 86868702 86868723 -166387860 + AT_rich Low_complexity Low_complexity 1 21 0 386 327 249 13 chr2 86870816 86871214 -166385369 - L2 LINE L2 -18 3295 2804 312 331 21 28 chr2 86871231 86871373 -166385210 - MER5B DNA MER1_type -36 142 2 184 348 0 0 chr2 86871435 86871524 -166385059 - L2 LINE L2 -540 2774 2686 2133 119 3 31 chr2 86871696 86872015 -166384568 - AluSp SINE Alu -3 310 1 288 0 0 0 chr2 86872453 86872485 -166384098 + (CA)n Simple_repeat Simple_repeat 2 33 0 978 248 31 27 chr2 86872502 86872796 -166383787 - MLT2D LTR ERVL -119 295 1 297 75 0 0 chr2 86873168 86873208 -166383375 + (CATA)n Simple_repeat Simple_repeat 2 41 0 322 173 12 25 chr2 86873210 86873291 -166383292 + (TATATG)n Simple_repeat Simple_repeat 3 82 0 270 216 0 11 chr2 86873300 86873388 -166383195 - L1MC4 LINE L1 -1342 6700 6614 1004 150 0 6 chr2 86873402 86873582 -166383001 + (TA)n Simple_repeat Simple_repeat 1 179 0 242 193 53 0 chr2 86873631 86873688 -166382895 - MER20 DNA MER1_type -155 64 5 574 263 104 40 chr2 86873691 86873942 -166382641 - LTR40c LTR ERVL -198 267 1 2193 129 0 0 chr2 86874587 86874897 -166381686 - AluSg SINE Alu 0 310 1 21 71 0 0 chr2 86875260 86875302 -166381281 + AT_rich Low_complexity Low_complexity 1 42 0 1538 194 56 47 chr2 86875411 86875771 -166380812 - MLT1A1 LTR MaLR -2 363 1 459 317 25 12 chr2 86876924 86877085 -166379498 - MER45A DNA AcHobo 0 178 16 277 214 34 22 chr2 86877117 86877206 -166379377 + CT-rich Low_complexity Low_complexity 2 91 0 192 118 29 0 chr2 86877880 86877914 -166378669 - L2 LINE L2 -1281 2033 1999 903 100 3 0 chr2 86878108 86878250 -166378333 - LTR12 LTR ERV1 0 714 457 4590 98 40 8 chr2 86878250 86878916 -166377667 - LTR12 LTR ERV1 0 688 1 1188 268 90 74 chr2 86879327 86879413 -166377170 - L1ME3A LINE L1 -7 6163 6080 2139 116 0 10 chr2 86879413 86879707 -166376876 + AluSg SINE Alu 1 291 -19 1188 268 90 74 chr2 86879707 86880714 -166375869 - L1ME3A LINE L1 -90 6080 5048 627 221 16 0 chr2 86880735 86880862 -166375721 - AluJb SINE Alu -46 266 138 4355 62 7 0 chr2 86880904 86881455 -166375128 - L1PA8 LINE L1 -2 6170 5616 284 305 8 38 chr2 86881456 86881587 -166374996 - L1ME3A LINE L1 -1121 5025 4899 901 181 12 0 chr2 86881788 86881954 -166374629 - FRAM SINE Alu -3 173 6 4620 102 83 86 chr2 86881954 86883322 -166373261 + pTR5 LTR ERV1 743 2438 0 521 254 15 8 chr2 86883344 86883474 -166373109 - AluJb SINE Alu -181 131 1 1560 193 30 7 chr2 86884039 86884334 -166372249 + AluJo SINE Alu 3 304 -8 992 222 31 29 chr2 86884865 86884950 -166371633 + L1MA9 LINE L1 4424 4507 -1805 1291 20 0 0 chr2 86884950 86885102 -166371481 + L1PA4 LINE L1 5998 6149 -6 992 222 31 29 chr2 86885102 86886068 -166370515 + L1MA9 LINE L1 4507 5630 -682 192 40 0 0 chr2 86886068 86886093 -166370490 + (CA)n Simple_repeat Simple_repeat 2 26 0 992 222 31 29 chr2 86886093 86886258 -166370325 + L1MA9 LINE L1 5630 5793 -519 305 289 0 0 chr2 86886290 86886380 -166370203 - L1MC4 LINE L1 -1337 6705 6616 217 132 0 0 chr2 86886381 86886419 -166370164 + (TA)n Simple_repeat Simple_repeat 1 38 0 2226 151 39 28 chr2 86886422 86886879 -166369704 + L1MA9 LINE L1 5811 6272 -40 21 0 0 0 chr2 86886881 86886902 -166369681 + AT_rich Low_complexity Low_complexity 1 21 0 39 74 0 0 chr2 86889904 86889985 -166366598 + AT_rich Low_complexity Low_complexity 1 81 0 270 336 75 27 chr2 86891505 86891651 -166364932 + MIR3 SINE MIR 46 198 -10 219 139 0 0 chr2 86892024 86892060 -166364523 + (TTA)n Simple_repeat Simple_repeat 1 36 0 21 36 0 0 chr2 86893649 86893677 -166362906 + AT_rich Low_complexity Low_complexity 1 28 0 1587 186 69 3 chr2 86893685 86893976 -166362607 - AluJb SINE Alu -2 310 1 624 229 8 0 chr2 86895234 86895352 -166361231 + FLAM_C SINE Alu 5 123 -10 189 245 265 20 chr2 86895401 86895499 -166361084 + MIR SINE MIR 128 249 -13 24 53 0 0 chr2 86895600 86895638 -166360945 + AT_rich Low_complexity Low_complexity 1 38 0 36 62 0 0 chr2 86896007 86896071 -166360512 + AT_rich Low_complexity Low_complexity 1 64 0 22 0 0 0 chr2 86897633 86897655 -166358928 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 86899419 86899447 -166357136 + AT_rich Low_complexity Low_complexity 1 28 0 1574 197 82 15 chr2 86899688 86900028 -166356555 + MER74A LTR ERVL 15 377 -181 245 297 0 0 chr2 86900033 86900097 -166356486 + T-rich Low_complexity Low_complexity 1 64 0 2320 63 0 0 chr2 86900098 86900398 -166356185 - L1PA5 LINE L1 -1 6153 5854 1466 44 0 0 chr2 86900398 86900579 -166356004 + L1P LINE L1 2517 2697 -3449 623 241 28 0 chr2 86900579 86900724 -166355859 + MER74B LTR ERVL 448 596 -26 225 332 16 78 chr2 87102499 87102692 -166153891 - MER102b DNA MER1_type -25 316 136 1002 217 0 47 chr2 87102708 87102943 -166153640 + AluJo SINE Alu 28 251 -61 195 42 0 0 chr2 87103114 87103138 -166153445 + (T)n Simple_repeat Simple_repeat 1 24 0 26 64 0 0 chr2 87103854 87103901 -166152682 + AT_rich Low_complexity Low_complexity 1 47 0 2547 48 0 0 chr2 87105871 87106180 -166150403 - AluY SINE Alu -2 309 1 424 198 0 0 chr2 87106771 87106857 -166149726 + L1PA13 LINE L1 6078 6163 0 23 0 0 0 chr2 87106981 87107004 -166149579 + AT_rich Low_complexity Low_complexity 1 23 0 272 338 193 21 chr2 87107241 87107578 -166149005 - L3 LINE CR1 -3 1574 1180 1534 183 34 36 chr2 87108407 87108658 -166147925 + L1PA16 LINE L1 5810 6061 -105 1768 161 10 3 chr2 87108658 87108949 -166147634 + AluJo SINE Alu 1 293 -19 1534 183 34 36 chr2 87108949 87109053 -166147530 + L1PA16 LINE L1 6061 6164 -2 194 79 0 53 chr2 87109580 87109618 -166146965 + (CATATA)n Simple_repeat Simple_repeat 3 38 0 1462 233 44 53 chr2 87109887 87110338 -166146245 - MLT1C LTR MaLR 0 467 21 314 292 31 0 chr2 87110344 87110440 -166146143 - MLT1I LTR MaLR -2 407 309 404 235 163 0 chr2 87110748 87110846 -166145737 + FRAM SINE Alu 33 146 -20 229 239 0 0 chr2 87111433 87111479 -166145104 + (TA)n Simple_repeat Simple_repeat 1 46 0 31 44 0 0 chr2 87111821 87111866 -166144717 + AT_rich Low_complexity Low_complexity 1 45 0 210 361 0 14 chr2 87112892 87112964 -166143619 + L2 LINE L2 3201 3271 -1 252 319 53 63 chr2 87113707 87113951 -166142632 + L2 LINE L2 2841 3083 -230 1896 127 61 28 chr2 87113951 87114314 -166142269 + THE1C LTR MaLR 1 375 0 252 319 53 63 chr2 87114314 87114370 -166142213 + L2 LINE L2 3083 3138 -175 372 222 103 72 chr2 87114462 87114656 -166141927 + LTR4 LTR ERV1 1 200 -396 716 246 14 28 chr2 87114872 87115087 -166141496 + LTR4 LTR ERV1 385 596 0 356 321 42 37 chr2 87115396 87115611 -166140972 + MLT1J LTR MaLR 242 457 -54 1715 238 76 57 chr2 87116237 87116766 -166139817 + MER77 LTR ERV1 54 592 -13 260 176 81 27 chr2 87117613 87117687 -166138896 + LTR50 LTR ERVL 89 166 -629 * 1115 303 31 6 chr2 87117673 87117990 -166138593 - LTR16C LTR ERVL -68 423 99 364 321 94 6 chr2 87118476 87118635 -166137948 + ERVL LTR ERVL 1501 1673 -4091 2623 213 31 48 chr2 87118653 87119260 -166137323 + MER77 LTR ERV1 9 605 0 584 352 75 6 chr2 87119260 87119621 -166136962 + ERVL LTR ERVL 1680 2065 -3699 2236 87 0 13 chr2 87121263 87121563 -166135020 + AluSc SINE Alu 1 296 -13 270 333 98 52 chr2 87121958 87122285 -166134298 + L2 LINE L2 1310 1651 -1663 248 258 0 32 chr2 87122387 87122449 -166134134 + polypurine Low_complexity Low_complexity 4 63 0 187 51 0 77 chr2 87122451 87122490 -166134093 + (GAAAA)n Simple_repeat Simple_repeat 5 40 0 313 253 92 0 chr2 87122798 87122885 -166133698 + L1MC4 LINE L1 6610 6704 -1338 2178 121 3 0 chr2 87123369 87123667 -166132916 - AluSc SINE Alu -10 299 1 2553 43 7 0 chr2 87124047 87124351 -166132232 + AluY SINE Alu 1 306 -5 24 32 0 0 chr2 87125329 87125360 -166131223 + AT_rich Low_complexity Low_complexity 1 31 0 1954 122 7 7 chr2 87125435 87125723 -166130860 - AluSx SINE Alu -24 288 1 186 43 0 0 chr2 87125743 87125766 -166130817 + (T)n Simple_repeat Simple_repeat 1 23 0 299 221 30 133 chr2 87125782 87126045 -166130538 - LTR37B LTR ERV1 -227 241 6 21 57 0 0 chr2 87127020 87127055 -166129528 + AT_rich Low_complexity Low_complexity 1 35 0 420 39 0 0 chr2 87127077 87127129 -166129454 + L1PA6 LINE L1 6095 6146 -8 26 0 0 0 chr2 87128269 87128295 -166128288 + AT_rich Low_complexity Low_complexity 1 26 0 4691 199 26 19 chr2 87128841 87129390 -166127193 + L1MA9 LINE L1 5254 5815 -497 210 37 0 0 chr2 87129390 87129417 -166127166 + (GA)n Simple_repeat Simple_repeat 2 28 0 4691 199 26 19 chr2 87129417 87129894 -166126689 + L1MA9 LINE L1 5815 6287 -25 3154 222 35 15 chr2 87130584 87131377 -166125206 - L1MC3 LINE L1 -95 7690 6882 232 128 0 64 chr2 87131435 87131482 -166125101 - MER34 LTR ERV1 -28 514 471 1348 233 40 48 chr2 87131482 87131881 -166124702 + MSTD LTR MaLR 1 396 0 1077 220 42 23 chr2 87131881 87132283 -166124300 - MER34 LTR ERV1 -71 471 28 4054 210 57 1 chr2 87132286 87133209 -166123374 - L1MC3 LINE L1 -934 6851 5877 1785 275 64 23 chr2 87133250 87134689 -166121894 - L1MCb LINE L1 -4849 1196 7 1512 196 3 3 chr2 87135371 87135656 -166120927 + L1 LINE L1 4060 4344 -1802 1725 179 155 11 chr2 87135656 87136030 -166120553 + MSTA LTR MaLR 1 428 0 9030 178 21 7 chr2 87136065 87137670 -166118913 + MSTA-int LTR MaLR 24 1650 -1 1820 175 138 8 chr2 87137673 87138050 -166118533 + MSTA LTR MaLR 3 428 0 5083 178 32 7 chr2 87138051 87139822 -166116761 + L1PA16 LINE L1 4344 6157 -9 267 83 48 24 chr2 87140334 87140418 -166116165 + (TA)n Simple_repeat Simple_repeat 1 86 0 207 0 0 0 chr2 87140440 87140463 -166116120 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 291 269 42 74 chr2 87140504 87140720 -166115863 + L1ME3A LINE L1 5962 6170 0 228 208 39 0 chr2 87140710 87140787 -166115796 + L1MC2 LINE L1 4974 5053 -1093 * 185 0 40 0 chr2 87140797 87140822 -166115761 + (TA)n Simple_repeat Simple_repeat 1 26 0 7180 42 6 13 chr2 87140823 87142404 -166114179 - L1PA5 LINE L1 -13 6141 4570 1362 154 49 8 chr2 87142404 87142650 -166113933 - Tigger5 DNA MER2_type -1 2322 2067 4427 200 81 16 chr2 87142682 87143890 -166112693 + L1MC2 LINE L1 5050 6332 -12 267 79 0 0 chr2 87144845 87144883 -166111700 + (TC)n Simple_repeat Simple_repeat 1 38 0 956 103 0 0 chr2 87145598 87145724 -166110859 + AluSq/x SINE Alu 8 133 -180 236 200 17 0 chr2 87145778 87145838 -166110745 + (CA)n Simple_repeat Simple_repeat 2 62 0 367 192 10 10 chr2 87145865 87145969 -166110614 + (TA)n Simple_repeat Simple_repeat 2 105 0 257 172 16 0 chr2 87146063 87146127 -166110456 + (TG)n Simple_repeat Simple_repeat 2 66 0 449 291 24 57 chr2 87146402 87146612 -166109971 + MER21B LTR ERV1 511 713 -150 21 0 0 0 chr2 87148549 87148570 -166108013 + AT_rich Low_complexity Low_complexity 1 21 0 435 283 118 48 chr2 87149520 87149877 -166106706 - MLT2F LTR ERVL 0 663 282 2173 95 20 0 chr2 87150841 87151135 -166105448 + AluSx SINE Alu 1 300 -12 28 0 0 0 chr2 87151955 87151983 -166104600 + AT_rich Low_complexity Low_complexity 1 28 0 180 350 31 81 chr2 87152072 87152232 -166104351 + L2 LINE L2 3118 3269 -3 327 220 119 0 chr2 87153949 87154067 -166102516 - LTR37A LTR ERV1 -12 414 283 298 320 8 8 chr2 87154082 87154207 -166102376 + (TA)n Simple_repeat Simple_repeat 1 125 0 2594 206 49 15 chr2 87154838 87155453 -166101130 + MER92B LTR ERV1 1 636 0 240 35 0 0 chr2 87155627 87155656 -166100927 + (CTG)n Simple_repeat Simple_repeat 1 29 0 225 65 0 0 chr2 87155932 87155963 -166100620 + (TAGA)n Simple_repeat Simple_repeat 4 34 0 21 0 0 0 chr2 87156107 87156128 -166100455 + AT_rich Low_complexity Low_complexity 1 21 0 435 29 29 14 chr2 87156847 87156917 -166099666 + (TCTA)n Simple_repeat Simple_repeat 3 73 0 189 74 0 0 chr2 87156918 87156945 -166099638 + (CAGAGA)n Simple_repeat Simple_repeat 2 28 0 1652 216 109 33 chr2 87156950 87157380 -166099203 - MLT2B1 LTR ERVL -57 463 1 247 250 0 29 chr2 87157500 87157568 -166099015 + T-rich Low_complexity Low_complexity 5 70 0 180 273 0 0 chr2 87157580 87157657 -166098926 + T-rich Low_complexity Low_complexity 1 77 0 3885 143 36 8 chr2 87157660 87158330 -166098253 + L1MC1 LINE L1 5636 6324 -9 1128 199 64 25 chr2 87158346 87158628 -166097955 + L1MB4 LINE L1 5885 6177 -3 220 356 59 0 chr2 87159171 87159289 -166097294 + MIR3 SINE MIR 34 158 -50 573 167 58 0 chr2 87159560 87159680 -166096903 - L1MB5 LINE L1 -3 6171 6045 24 0 0 0 chr2 87159712 87159736 -166096847 + AT_rich Low_complexity Low_complexity 1 24 0 327 49 0 0 chr2 87159814 87159855 -166096728 + (CA)n Simple_repeat Simple_repeat 2 42 0 23 0 0 0 chr2 87160134 87160157 -166096426 + AT_rich Low_complexity Low_complexity 1 23 0 279 266 11 11 chr2 87160716 87160810 -166095773 - L1MB5 LINE L1 -260 5861 5768 881 186 8 85 chr2 87160998 87161234 -166095349 + MER20 DNA MER1_type 2 219 0 2617 236 74 13 chr2 87161493 87162369 -166094214 + L1PBa LINE L1 114 1043 -5820 349 86 103 0 chr2 87162376 87162434 -166094149 + L1PBa LINE L1 1094 1157 -5706 655 237 33 57 chr2 87162487 87162787 -166093796 + pTR5 LTR ERV1 769 1061 -1377 637 294 30 40 chr2 87163331 87163627 -166092956 - MLT1I LTR MaLR -20 389 97 210 189 0 0 chr2 87164930 87164967 -166091616 + MIR SINE MIR 221 257 -5 347 194 14 0 chr2 87165467 87165539 -166091044 - MER74A LTR ERVL 0 558 486 1314 128 79 0 chr2 87165552 87165755 -166090828 - AluSq SINE Alu -94 219 1 1244 212 35 61 chr2 87166926 87167322 -166089261 + MLT1B LTR MaLR 5 390 0 459 0 0 0 chr2 87167499 87167550 -166089033 + (CA)n Simple_repeat Simple_repeat 2 52 0 240 239 354 0 chr2 87167572 87167702 -166088881 + Charlie2a DNA MER1_type 244 419 -2443 565 277 14 14 chr2 87168609 87168822 -166087761 - MER110 LTR ERV1 -126 365 153 207 314 102 58 chr2 87169322 87169459 -166087124 - MIR3 SINE MIR -58 150 8 339 254 14 0 chr2 87169885 87169956 -166086627 + MER20 DNA MER1_type 69 140 -79 880 246 75 29 chr2 87169976 87170413 -166086170 + MLT2B1 LTR ERVL 1 464 0 233 290 16 0 chr2 87170413 87170472 -166086111 + MER20 DNA MER1_type 157 216 -3 285 220 132 11 chr2 87170496 87170587 -166085996 - MER110 LTR ERV1 -389 102 1 1824 161 24 0 chr2 87170680 87170971 -166085612 + AluSx SINE Alu 1 298 -14 1219 256 35 87 chr2 87170974 87171180 -166085403 - MER110-int LTR ERV1 -117 4530 4315 2045 134 0 0 chr2 87171180 87171478 -166085105 + AluSx SINE Alu 1 298 -14 1219 256 35 87 chr2 87171478 87171813 -166084770 - MER110-int LTR ERV1 -332 4315 4017 1815 117 0 35 chr2 87171917 87172207 -166084376 - AluSx SINE Alu -30 282 3 405 325 44 76 chr2 87172354 87172760 -166083823 - MER110-int LTR ERV1 -852 3795 3403 723 288 48 32 chr2 87172913 87173347 -166083236 - L1M4 LINE L1 -4865 1677 1237 523 187 0 6 chr2 87173884 87174021 -166082562 + MER89 LTR ERV1 1 235 -324 901 219 57 18 chr2 87174073 87174301 -166082282 + MER89 LTR ERV1 323 559 0 393 234 35 78 chr2 87174699 87174840 -166081743 + MLT1C LTR MaLR 9 143 -324 1251 301 19 23 chr2 87175015 87175494 -166081089 - MER110 LTR ERV1 -14 477 1 764 256 90 75 chr2 87175502 87176046 -166080537 + Charlie2a DNA MER1_type 505 1056 -1806 639 238 123 34 chr2 87176071 87176420 -166080163 + Charlie2a DNA MER1_type 1979 2358 -504 548 338 34 3 chr2 87176704 87177027 -166079556 + L1ME LINE L1 633 965 -5240 253 269 93 62 chr2 87177089 87177379 -166079204 + L1ME LINE L1 1037 1335 -4880 642 256 118 73 chr2 87177521 87178526 -166078057 + L1ME LINE L1 1598 2610 -3605 719 233 17 23 chr2 87178543 87178715 -166077868 - MLT1B LTR MaLR -16 374 204 468 62 0 0 chr2 87178724 87178788 -166077795 + (TC)n Simple_repeat Simple_repeat 1 64 0 228 67 0 0 chr2 87178791 87178821 -166077762 + (TG)n Simple_repeat Simple_repeat 1 30 0 657 193 75 12 chr2 87178824 87178985 -166077598 - MLT1B LTR MaLR -219 171 1 582 304 122 8 chr2 87178986 87179486 -166077097 + L1ME LINE L1 2608 3164 -3051 315 175 30 62 chr2 87179571 87179676 -166076907 - L1MA4 LINE L1 -452 5848 5748 * 569 173 273 7 chr2 87179648 87179798 -166076785 + L1MA4 LINE L1 5828 6017 -283 376 169 45 0 chr2 87179806 87179895 -166076688 + L1MB3 LINE L1 6087 6179 -4 21 0 0 0 chr2 87180754 87180775 -166075808 + AT_rich Low_complexity Low_complexity 1 21 0 7073 168 7 10 chr2 87180819 87181353 -166075230 + L1PB1 LINE L1 3868 4402 -1749 234 0 0 0 chr2 87181353 87181379 -166075204 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 7073 168 7 10 chr2 87181379 87183134 -166073449 + L1PB1 LINE L1 4402 6150 -1 1439 201 80 26 chr2 87183256 87183645 -166072938 - MLT2D LTR ERVL 0 414 5 1017 174 0 0 chr2 87183649 87183821 -166072762 - ERVL-D LTR ERVL -7 5757 5586 2510 58 7 0 chr2 87183821 87184129 -166072454 - AluY SINE Alu -1 310 1 23 78 0 0 chr2 87185400 87185451 -166071132 + AT_rich Low_complexity Low_complexity 1 51 0 1132 300 41 6 chr2 87185811 87186344 -166070239 - L1MEc LINE L1 -4463 1933 1382 2598 109 73 12 chr2 87186345 87186721 -166069862 + MLT2A1 LTR ERVL 1 406 -38 405 0 0 0 chr2 87186721 87186766 -166069817 + (TG)n Simple_repeat Simple_repeat 2 46 0 2598 109 73 12 chr2 87186766 87186802 -166069781 + MLT2A1 LTR ERVL 406 438 -6 843 261 114 25 chr2 87186817 87187377 -166069206 - L1MEc LINE L1 -5029 1367 758 1232 377 55 27 chr2 87187782 87189016 -166067567 + L2 LINE L2 2052 3313 0 3596 195 37 2 chr2 87189131 87189757 -166066826 - L1M1 LINE L1 -5818 1747 1100 541 179 60 8 chr2 87189755 87189872 -166066711 - L1M1 LINE L1 -7432 133 11 * 1010 248 14 0 chr2 87190196 87190406 -166066177 + ERVL LTR ERVL 4305 4517 -1247 932 64 88 0 chr2 87192138 87192263 -166064320 - AluYa5 SINE Alu -16 295 160 24 0 0 0 chr2 87192299 87192323 -166064260 + AT_rich Low_complexity Low_complexity 1 24 0 31 82 0 0 chr2 87192630 87192703 -166063880 + AT_rich Low_complexity Low_complexity 1 73 0 207 405 26 37 chr2 87192832 87193022 -166063561 - L2 LINE L2 -255 3017 2830 990 274 74 40 chr2 87194264 87194643 -166061940 + L1PB4 LINE L1 8 399 -6450 383 336 30 15 chr2 87194729 87194860 -166061723 + L1PB4 LINE L1 680 812 -6037 1890 131 13 39 chr2 87194883 87195195 -166061388 - AluSx SINE Alu 0 312 9 379 300 108 108 chr2 87195639 87196102 -166060481 + L1PB4 LINE L1 672 1134 -5715 11987 230 32 23 chr2 87196305 87201010 -166055573 + L1PB4 LINE L1 999 5891 -967 264 30 0 0 chr2 87201010 87201043 -166055540 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 11987 230 32 23 chr2 87201043 87202017 -166054566 + L1PB4 LINE L1 5891 6855 -3 2836 217 59 43 chr2 87202296 87203087 -166053496 - MER45B DNA AcHobo 0 1040 237 229 284 117 47 chr2 87203271 87203689 -166052894 - L1MC/D LINE L1 -436 5685 5266 27 29 0 0 chr2 87204158 87204192 -166052391 + AT_rich Low_complexity Low_complexity 1 34 0 25 31 0 0 chr2 87204258 87204290 -166052293 + AT_rich Low_complexity Low_complexity 1 32 0 1792 124 0 22 chr2 87204301 87204574 -166052009 + AluSx SINE Alu 1 267 -45 458 287 42 23 chr2 87205200 87205461 -166051122 - L1MEd LINE L1 -4966 1153 888 635 103 66 7 chr2 87206024 87206328 -166050255 + (TA)n Simple_repeat Simple_repeat 1 322 0 252 113 0 38 chr2 87206334 87206387 -166050196 - LTR66 LTR ERVL -171 439 389 * 1265 163 9 18 chr2 87206381 87206608 -166049975 - MSTD LTR MaLR -171 225 1 2128 99 0 7 chr2 87206677 87206985 -166049598 - AluSg SINE Alu 0 306 1 3216 159 18 15 chr2 87206986 87207583 -166049000 + L1MA8 LINE L1 5306 5904 -387 248 317 24 0 chr2 87207689 87207771 -166048812 - MER63 DNA MER1_type 0 1062 979 379 150 0 0 chr2 87207774 87207834 -166048749 - MER63 DNA MER1_type -313 748 689 23 0 0 0 chr2 87207984 87208007 -166048576 + AT_rich Low_complexity Low_complexity 1 23 0 1281 99 0 0 chr2 87211019 87211191 -166045392 - AluSg/x SINE Alu -4 308 137 613 268 14 0 chr2 87214910 87215052 -166041531 + MER5A DNA MER1_type 1 144 -45 885 251 22 17 chr2 87215285 87215401 -166041182 + AluJo SINE Alu 5 119 -193 189 0 0 0 chr2 87215401 87215422 -166041161 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 885 251 22 17 chr2 87215422 87215536 -166041047 + AluJo SINE Alu 119 236 -76 340 191 0 43 chr2 87218617 87218711 -166037872 - L1MB8 LINE L1 0 6178 6089 2521 199 19 16 chr2 87218728 87219295 -166037288 - L1MB8 LINE L1 -210 5968 5400 550 302 64 33 chr2 87219397 87219631 -166036952 - L1ME3A LINE L1 -287 5883 5630 345 269 96 0 chr2 87219631 87219735 -166036848 - MER81 DNA DNA 0 114 1 550 302 64 33 chr2 87219735 87219894 -166036689 - L1ME3A LINE L1 -540 5630 5477 21 0 0 0 chr2 87220431 87220452 -166036131 + AT_rich Low_complexity Low_complexity 1 21 0 242 224 20 0 chr2 87220681 87220730 -166035853 + (CA)n Simple_repeat Simple_repeat 1 50 0 1940 117 50 0 chr2 87221450 87221731 -166034852 + AluSq SINE Alu 1 295 -18 225 0 0 0 chr2 87222727 87222752 -166033831 + (CA)n Simple_repeat Simple_repeat 2 26 0 283 170 19 0 chr2 87223130 87223183 -166033400 - MIR SINE MIR -108 154 101 540 151 0 0 chr2 87224057 87224143 -166032440 + AluS SINE Alu 1 86 -226 22 0 0 0 chr2 87224724 87224746 -166031837 + AT_rich Low_complexity Low_complexity 1 22 0 206 384 0 0 chr2 87224833 87224906 -166031677 - L2 LINE L2 -47 3266 3194 21 0 0 0 chr2 87226945 87226966 -166029617 + AT_rich Low_complexity Low_complexity 1 21 0 625 316 35 13 chr2 87228474 87228705 -166027878 - MIR SINE MIR -10 252 17 3659 193 42 5 chr2 87228729 87229469 -166027114 + L1MC2 LINE L1 5432 6198 -146 390 172 115 0 chr2 87229482 87229569 -166027014 + L1MC2 LINE L1 6243 6339 -5 21 0 0 0 chr2 87229870 87229891 -166026692 + AT_rich Low_complexity Low_complexity 1 21 0 224 123 46 15 chr2 87231300 87231365 -166025218 + (TA)n Simple_repeat Simple_repeat 2 68 0 360 0 0 0 chr2 87231738 87231778 -166024805 + (CA)n Simple_repeat Simple_repeat 2 41 0 818 167 69 16 chr2 87231778 87232074 -166024509 - MER47A DNA MER2_type -5 361 2 224 167 0 19 chr2 87232075 87232129 -166024454 + (TA)n Simple_repeat Simple_repeat 2 54 0 2161 122 3 0 chr2 87233047 87233350 -166023233 - AluSg SINE Alu -6 304 1 599 77 0 0 chr2 87233553 87233631 -166022952 - AluSg/x SINE Alu -19 293 216 1102 223 110 23 chr2 87233698 87233998 -166022585 + MER58B DNA MER1_type 13 338 -3 237 265 29 0 chr2 87234447 87234515 -166022068 - L1P4 LINE L1 -419 5742 5673 27 29 0 0 chr2 87234878 87234912 -166021671 + AT_rich Low_complexity Low_complexity 1 34 0 866 94 0 24 chr2 87234960 87235087 -166021496 - L1PA16 LINE L1 -9 6157 6034 734 269 8 111 chr2 87235118 87235497 -166021086 + MLT1D LTR MaLR 1 340 -165 555 278 19 25 chr2 87235503 87235665 -166020918 + MLT1D-int LTR MaLR 731 891 -480 835 131 15 0 chr2 87235848 87235978 -166020605 - L1PA4 LINE L1 -10 6145 6014 460 48 0 0 chr2 87236117 87236180 -166020403 - L1PA4 LINE L1 -146 6009 5947 * 1040 209 61 119 chr2 87236178 87236590 -166019993 + MLT1D-int LTR MaLR 984 1371 0 2165 223 52 17 chr2 87236590 87237071 -166019512 + MLT1D LTR MaLR 1 498 -7 204 40 0 0 chr2 87239326 87239351 -166017232 + (TATG)n Simple_repeat Simple_repeat 2 26 0 984 204 62 7 chr2 87239613 87239906 -166016677 - MER33 DNA MER1_type -22 302 1 425 56 0 56 chr2 87240426 87240498 -166016085 - L1PA16 LINE L1 -1 6165 6098 3290 148 20 2 chr2 87240498 87241325 -166015258 - L1P4 LINE L1 -397 5769 4933 813 236 118 16 chr2 87241364 87241787 -166014796 + LTR37B LTR ERV1 3 468 0 1479 254 22 50 chr2 87242438 87242902 -166013681 + MER89 LTR ERV1 1 550 -9 2375 258 40 72 chr2 87243217 87244219 -166012364 + MER89-int LTR ERV1 443 1412 -5389 691 219 0 26 chr2 87244227 87244382 -166012201 + MER89 LTR ERV1 409 559 0 290 270 79 0 chr2 87244832 87244921 -166011662 + MIR3 SINE MIR 65 160 -48 3252 133 54 25 chr2 87245042 87245635 -166010948 + MER4B LTR ERV1 1 610 0 367 345 50 7 chr2 87246806 87246945 -166009638 - L2 LINE L2 -1 3271 3127 356 331 97 12 chr2 87247008 87247256 -166009327 + L2 LINE L2 1748 2016 -1298 244 212 71 0 chr2 87247266 87247351 -166009232 + (TCTA)n Simple_repeat Simple_repeat 3 93 0 532 360 174 13 chr2 87247405 87248251 -166008332 + L2 LINE L2 2067 3055 -258 26 50 0 0 chr2 87248897 87248937 -166007646 + AT_rich Low_complexity Low_complexity 1 40 0 190 237 26 0 chr2 87249187 87249225 -166007358 - MIR3 SINE MIR -21 187 149 225 345 43 29 chr2 87250642 87250781 -166005802 + MIR SINE MIR 101 241 -21 249 57 0 0 chr2 87252480 87252515 -166004068 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1302 56 0 0 chr2 87252522 87252684 -166003899 + AluY SINE Alu 135 296 -15 320 362 47 21 chr2 87253195 87253430 -166003153 + L1M4 LINE L1 3426 3666 -2480 1458 92 0 74 chr2 87253447 87253676 -166002907 + AluSc SINE Alu 1 212 -97 353 193 61 44 chr2 87255086 87255200 -166001383 - L1MB5 LINE L1 -80 6094 5979 1004 195 10 5 chr2 87255303 87255508 -166001075 - L1MB5 LINE L1 -170 6004 5799 1954 120 4 0 chr2 87256692 87256966 -165999617 - AluSx SINE Alu -17 295 21 202 189 0 0 chr2 87257935 87257972 -165998611 + CT-rich Low_complexity Low_complexity 2 38 0 384 22 0 0 chr2 87257973 87258018 -165998565 + (CA)n Simple_repeat Simple_repeat 2 46 0 390 132 22 11 chr2 87259209 87259300 -165997283 + (TAGA)n Simple_repeat Simple_repeat 1 92 0 3696 216 88 35 chr2 87259551 87260573 -165996010 - Tigger6a DNA MER2_type 0 1083 8 372 22 0 0 chr2 87262555 87262600 -165993983 + (CA)n Simple_repeat Simple_repeat 2 46 0 21 36 0 0 chr2 87263212 87263240 -165993343 + AT_rich Low_complexity Low_complexity 1 28 0 2006 132 0 10 chr2 87263245 87263541 -165993042 + AluSx SINE Alu 1 293 -19 259 132 55 0 chr2 87263544 87263635 -165992948 + (TA)n Simple_repeat Simple_repeat 1 96 0 30 27 0 0 chr2 87263661 87263698 -165992885 + AT_rich Low_complexity Low_complexity 1 37 0 24 67 0 0 chr2 87264842 87264887 -165991696 + AT_rich Low_complexity Low_complexity 1 45 0 21 36 0 0 chr2 87265362 87265390 -165991193 + AT_rich Low_complexity Low_complexity 1 28 0 316 322 14 28 chr2 87267097 87267240 -165989343 + L2 LINE L2 3168 3308 -5 1075 284 124 14 chr2 87267506 87267573 -165989010 + L1M4 LINE L1 3004 3062 -3084 12846 24 1 2 chr2 87267573 87269894 -165986689 + L1PA4 LINE L1 3820 6152 -3 1075 284 124 14 chr2 87269894 87270682 -165985901 + L1M4 LINE L1 3062 3953 -2193 402 267 156 39 chr2 87270717 87270897 -165985686 - MER58C DNA MER1_type -14 201 1 1261 301 48 26 chr2 87270901 87271383 -165985200 + L1M4 LINE L1 3977 4484 -1662 2053 75 57 7 chr2 87271383 87271662 -165984921 + AluY SINE Alu 1 293 -18 1261 301 48 26 chr2 87271662 87271955 -165984628 + L1M4 LINE L1 4484 4769 -1377 * 7279 253 38 26 chr2 87271948 87274714 -165981869 + L1M4 LINE L1 2195 4992 -1154 1154 47 0 7 chr2 87274712 87274861 -165981722 - L1PA5 LINE L1 -359 5796 5649 * 2946 50 0 0 chr2 87274861 87275221 -165981362 + L1PA5 LINE L1 5779 6141 -13 748 38 54 23 chr2 87275227 87275490 -165981093 + (TA)n Simple_repeat Simple_repeat 1 271 0 220 276 31 10 chr2 87275654 87275752 -165980831 + (TA)n Simple_repeat Simple_repeat 1 100 0 229 232 0 0 chr2 87275777 87275833 -165980750 + L1MB8 LINE L1 6093 6148 -30 288 0 0 0 chr2 87277178 87277210 -165979373 + (TA)n Simple_repeat Simple_repeat 1 32 0 513 208 20 0 chr2 87277613 87277714 -165978869 - MER58 DNA MER1_type 0 2420 2318 21 0 0 0 chr2 87277824 87277845 -165978738 + AT_rich Low_complexity Low_complexity 1 21 0 258 200 18 0 chr2 87278067 87278122 -165978461 - L1MB8 LINE L1 -30 6148 6093 304 260 10 10 chr2 87278146 87278242 -165978341 + (TA)n Simple_repeat Simple_repeat 1 96 0 2037 194 84 2 chr2 87278243 87278708 -165977875 - L1MB4 LINE L1 -17 6163 5661 23 33 0 0 chr2 87278715 87278745 -165977838 + AT_rich Low_complexity Low_complexity 1 30 0 490 303 41 36 chr2 87278777 87278998 -165977585 - MIR SINE MIR -1 261 40 21 0 0 0 chr2 87279114 87279135 -165977448 + AT_rich Low_complexity Low_complexity 1 21 0 514 312 43 24 chr2 87280096 87280349 -165976234 - HAL1 LINE L1 -845 1662 1405 22 35 0 0 chr2 87280440 87280469 -165976114 + AT_rich Low_complexity Low_complexity 1 29 0 185 385 0 22 chr2 87281585 87281676 -165974907 + MIR SINE MIR 63 151 -111 715 282 130 81 chr2 87281835 87282389 -165974194 - L1ME LINE L1 -5482 588 8 197 198 0 49 chr2 87283290 87283371 -165973212 + (TA)n Simple_repeat Simple_repeat 1 77 0 21 0 0 0 chr2 87284614 87284635 -165971948 + AT_rich Low_complexity Low_complexity 1 21 0 42 77 0 0 chr2 87285058 87285149 -165971434 + AT_rich Low_complexity Low_complexity 1 91 0 326 248 41 0 chr2 87286060 87286181 -165970402 + (TA)n Simple_repeat Simple_repeat 1 126 0 1197 172 82 7 chr2 87286928 87287249 -165969334 + MER61D LTR ERV1 1 401 -100 26039 147 10 14 chr2 87287251 87289461 -165967122 - L1PA10 LINE L1 -1 6482 4263 2255 92 0 23 chr2 87289461 87289765 -165966818 - AluY SINE Alu -14 297 1 26039 147 10 14 chr2 87289765 87293268 -165963315 - L1PA10 LINE L1 -2220 4263 771 2471 202 8 4 chr2 87293268 87293762 -165962821 - L1PA10 LINE L1 -5367 508 13 592 109 73 27 chr2 87293773 87293883 -165962700 + MER61D LTR ERV1 387 501 0 420 244 9 0 chr2 87293887 87294002 -165962581 + L1M4c LINE L1 1373 1488 -4896 433 293 166 0 chr2 87294101 87294306 -165962277 + L1MC4 LINE L1 7795 8033 -9 191 311 34 76 chr2 87295152 87295271 -165961312 + L2 LINE L2 3159 3272 0 417 315 45 39 chr2 87296048 87296226 -165960357 + L2 LINE L2 3118 3296 -17 359 321 119 25 chr2 87296328 87296646 -165959937 + L1ME4a LINE L1 5506 5853 -268 2457 222 68 20 chr2 87298763 87299456 -165957127 + L1MCa LINE L1 760 1485 -4941 1987 257 29 12 chr2 87299454 87300178 -165956405 + L1MCa LINE L1 2842 3577 -2849 * 2546 149 21 34 chr2 87301449 87302054 -165954529 - MER4B LTR ERV1 0 766 1 24 67 0 0 chr2 87302310 87302355 -165954228 + AT_rich Low_complexity Low_complexity 1 45 0 570 245 52 30 chr2 87302497 87302766 -165953817 - L1MC4a LINE L1 -1868 5940 5666 1218 213 67 10 chr2 87302790 87303254 -165953329 - MLT1E1 LTR MaLR 0 654 105 390 261 0 22 chr2 87303224 87303316 -165953267 - MLT1E LTR MaLR -431 162 73 * 252 333 50 14 chr2 87303451 87303592 -165952991 - L1MC4a LINE L1 -2291 5517 5372 732 291 120 40 chr2 87304037 87304330 -165952253 + MLT1H1 LTR MaLR 1 269 -286 431 90 13 0 chr2 87304330 87304408 -165952175 + (TAGA)n Simple_repeat Simple_repeat 2 80 0 732 291 120 40 chr2 87304408 87304648 -165951935 + MLT1H1 LTR MaLR 269 552 -3 390 362 67 41 chr2 87304701 87305111 -165951472 - L1MC4a LINE L1 -1302 4844 4415 825 235 174 26 chr2 87305111 87305456 -165951127 + MSTD LTR MaLR 1 396 0 390 362 67 41 chr2 87305456 87305586 -165950997 - L1MC4a LINE L1 -1731 4415 4290 186 293 10 10 chr2 87305959 87306058 -165950525 + G-rich Low_complexity Low_complexity 4 102 0 1796 122 4 4 chr2 87306353 87306608 -165949975 - AluSq SINE Alu -26 287 33 275 340 96 0 chr2 87307033 87307127 -165949456 + L2 LINE L2 3164 3266 -6 264 172 40 30 chr2 87307236 87307335 -165949248 + (TATAA)n Simple_repeat Simple_repeat 5 104 0 1943 156 0 0 chr2 87307415 87307716 -165948867 - AluSx SINE Alu -11 301 1 8591 121 13 2 chr2 87307843 87309113 -165947470 - HSMAR1 DNA Mariner -2 1285 3 1628 89 38 0 chr2 87310027 87310263 -165946320 + L1PA7 LINE L1 5910 6154 0 726 170 12 64 chr2 87310263 87310434 -165946149 + L1MA7 LINE L1 5953 6114 -177 838 142 21 0 chr2 87310439 87310580 -165946003 - L1PA16 LINE L1 -2 6164 6021 870 148 22 6 chr2 87310580 87310750 -165945833 + L1MA7 LINE L1 6106 6290 -1 26 30 0 0 chr2 87312117 87312150 -165944433 + AT_rich Low_complexity Low_complexity 1 33 0 2247 64 10 3 chr2 87313979 87314276 -165942307 + AluY SINE Alu 1 299 -12 183 376 103 16 chr2 87314558 87314752 -165941831 + MIR SINE MIR 4 214 -48 25 65 0 0 chr2 87315013 87315059 -165941524 + AT_rich Low_complexity Low_complexity 1 46 0 1143 166 8 30 chr2 87315568 87315803 -165940780 + THE1-int LTR MaLR 568 797 -783 2051 178 46 22 chr2 87316295 87316655 -165939928 + MSTB LTR MaLR 1 374 -52 2223 58 3 10 chr2 87316655 87316946 -165939637 - L1PA8 LINE L1 0 6172 5884 2051 178 46 22 chr2 87316946 87317001 -165939582 + MSTB LTR MaLR 374 426 0 21 36 0 0 chr2 87317077 87317105 -165939478 + AT_rich Low_complexity Low_complexity 1 28 0 399 21 0 0 chr2 87317278 87317326 -165939257 + (TG)n Simple_repeat Simple_repeat 1 48 0 318 227 0 0 chr2 87317562 87317628 -165938955 - MER94 DNA DNA -65 69 4 1280 167 118 34 chr2 87317812 87318176 -165938407 - MSTA LTR MaLR 0 428 1 8678 171 7 35 chr2 87318181 87319784 -165936799 - MSTA-int LTR MaLR -6 1574 17 1834 161 134 8 chr2 87319797 87320177 -165936406 - MSTA LTR MaLR 0 428 1 184 287 138 64 chr2 87321348 87321442 -165935141 - MIR SINE MIR -14 248 148 235 295 45 45 chr2 87321461 87321573 -165935010 + MIR SINE MIR 104 215 -47 416 185 25 37 chr2 87321579 87321660 -165934923 + Tigger1 DNA MER2_type 2338 2417 -1 10540 161 17 16 chr2 87321660 87323558 -165933025 - Tigger1 DNA MER2_type -512 1906 7 29 0 0 0 chr2 87323583 87323612 -165932971 + AT_rich Low_complexity Low_complexity 1 29 0 530 352 64 39 chr2 87324043 87324449 -165932134 - L2 LINE L2 -3 3310 2895 342 250 203 31 chr2 87324462 87324590 -165931993 + MER5A DNA MER1_type 17 166 -23 885 9 26 0 chr2 87324723 87324837 -165931746 + (TAGA)n Simple_repeat Simple_repeat 4 120 0 309 358 40 20 chr2 87324950 87325101 -165931482 - L2 LINE L2 -447 2867 2714 480 277 69 13 chr2 87325103 87325262 -165931321 - MER91B DNA MER1_type -3 187 20 1603 293 44 36 chr2 87325265 87325877 -165930706 - L2 LINE L2 -813 2501 1885 2192 62 4 0 chr2 87326125 87326399 -165930184 - AluY SINE Alu -21 290 16 777 10 29 0 chr2 87326634 87326736 -165929847 + (TAGA)n Simple_repeat Simple_repeat 4 108 0 1412 214 0 24 chr2 87326869 87327188 -165929395 - AluJb SINE Alu 0 312 1 596 43 74 25 chr2 87327464 87327627 -165928956 + (TA)n Simple_repeat Simple_repeat 2 172 0 21 36 0 0 chr2 87327820 87327848 -165928735 + AT_rich Low_complexity Low_complexity 1 28 0 31 26 0 0 chr2 87328190 87328228 -165928355 + AT_rich Low_complexity Low_complexity 1 38 0 2123 131 0 6 chr2 87328423 87328737 -165927846 - AluSx SINE Alu 0 312 1 9441 191 32 27 chr2 87328810 87331450 -165925133 - L1MA7 LINE L1 -10 6281 3621 2120 165 8 6 chr2 87331450 87331813 -165924770 - THE1B LTR MaLR 0 364 1 9441 191 32 27 chr2 87331813 87332505 -165924078 - L1MA7 LINE L1 -2670 3621 2934 1743 255 127 25 chr2 87332528 87333195 -165923388 + L1PA16 LINE L1 4597 5331 -815 3345 156 10 10 chr2 87333375 87333976 -165922607 + L1PA16 LINE L1 5560 6160 -6 24 53 0 0 chr2 87334073 87334111 -165922472 + AT_rich Low_complexity Low_complexity 1 38 0 543 73 12 0 chr2 87334111 87334193 -165922390 - L1MA3 LINE L1 0 6305 6223 22 0 0 0 chr2 87334638 87334660 -165921923 + AT_rich Low_complexity Low_complexity 1 22 0 1305 153 20 94 chr2 87334661 87334874 -165921709 + L1MC3 LINE L1 7469 7649 -136 2485 128 6 0 chr2 87334874 87335232 -165921351 - THE1B LTR MaLR -4 360 1 1305 153 20 94 chr2 87335232 87335359 -165921224 + L1MC3 LINE L1 7649 7784 -1 1303 280 76 61 chr2 87335355 87336144 -165920439 + L1ME3A LINE L1 5319 6119 -51 * 181 255 0 21 chr2 87336688 87336735 -165919848 + L2 LINE L2 2614 2659 -655 32 67 0 0 chr2 87337162 87337222 -165919361 + AT_rich Low_complexity Low_complexity 1 60 0 441 239 138 0 chr2 87337511 87337620 -165918963 - MLT1D LTR MaLR -374 131 8 1804 174 35 32 chr2 87338338 87338712 -165917871 - THE1C LTR MaLR 0 375 1 231 33 33 0 chr2 87338768 87338798 -165917785 - THE1C LTR MaLR -344 31 1 3640 226 110 15 chr2 87339650 87340699 -165915884 - L1MD2 LINE L1 -7 7163 6018 3566 242 46 20 chr2 87340719 87342214 -165914369 - L1MD2 LINE L1 -4033 2926 1376 246 287 57 33 chr2 87342232 87342354 -165914229 - L1MD2 LINE L1 -5715 1244 1120 2380 287 111 5 chr2 87342918 87343745 -165912838 - L1MD2 LINE L1 -5883 976 62 1260 239 88 47 chr2 87343745 87344188 -165912395 - MLT1C LTR MaLR 0 467 7 339 226 0 0 chr2 87344194 87344256 -165912327 - L1MD2 LINE L1 -6793 66 5 1731 169 7 14 chr2 87344530 87344826 -165911757 - AluJb SINE Alu -18 294 1 23 33 0 0 chr2 87345017 87345047 -165911536 + AT_rich Low_complexity Low_complexity 1 30 0 186 43 0 0 chr2 87345092 87345115 -165911468 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 1451 158 69 33 chr2 87346456 87346759 -165909824 + MER61A LTR ERV1 1 314 -29 186 194 0 0 chr2 87346831 87346862 -165909721 + L2 LINE L2 3232 3262 -10 265 142 45 37 chr2 87347228 87347362 -165909221 + (TATAA)n Simple_repeat Simple_repeat 2 136 0 24 67 0 0 chr2 87348027 87348072 -165908511 + AT_rich Low_complexity Low_complexity 1 45 0 35 24 0 0 chr2 87348763 87348805 -165907778 + AT_rich Low_complexity Low_complexity 1 42 0 403 308 26 45 chr2 87348917 87349073 -165907510 - MER5A DNA MER1_type -2 187 35 1256 164 30 164 chr2 87351120 87351434 -165905149 + MER2 DNA MER2_type 1 253 -91 1687 185 0 3 chr2 87351434 87351726 -165904857 - AluSx SINE Alu -21 291 1 1256 164 30 164 chr2 87351726 87351808 -165904775 + MER2 DNA MER2_type 253 344 0 469 126 45 0 chr2 87351808 87351919 -165904664 + (TA)n Simple_repeat Simple_repeat 1 116 0 28 61 0 0 chr2 87352443 87352492 -165904091 + AT_rich Low_complexity Low_complexity 1 49 0 1549 180 20 27 chr2 87352613 87352908 -165903675 + AluJb SINE Alu 3 295 -17 189 268 0 0 chr2 87353247 87353288 -165903295 - L3 LINE CR1 -23 1554 1514 400 313 141 12 chr2 87354058 87354307 -165902276 - L2 LINE L2 -25 3288 3008 182 250 33 17 chr2 87354430 87354490 -165902093 - L2 LINE L2 -329 2984 2924 21 0 0 0 chr2 87355420 87355441 -165901142 + AT_rich Low_complexity Low_complexity 1 21 0 338 247 81 69 chr2 87355477 87355651 -165900932 + L1ME LINE L1 5528 5703 -418 595 149 32 0 chr2 87356835 87356929 -165899654 + U6 snRNA snRNA 9 105 -2 2648 233 56 19 chr2 87357921 87359224 -165897359 - L1MB8 LINE L1 -80 6098 4747 1352 124 5 0 chr2 87359239 87359433 -165897150 - AluSq SINE Alu -118 195 1 2141 248 52 13 chr2 87359437 87360135 -165896448 - L1MB8 LINE L1 -1392 4754 4030 469 181 9 9 chr2 87360132 87360237 -165896346 + L1MA4 LINE L1 5945 6049 -251 * 3106 190 58 0 chr2 87360237 87360827 -165895756 - Tigger1 DNA MER2_type -14 2404 1781 * 4407 163 50 0 chr2 87360821 87361617 -165894966 + Tigger1 DNA MER2_type 1438 2273 -145 1152 169 5 0 chr2 87361613 87361808 -165894775 + Tigger1 DNA MER2_type 1949 2144 -274 * 1137 250 32 55 chr2 87362038 87362356 -165894227 - L1M4c LINE L1 -4499 2458 2052 1193 208 130 13 chr2 87362356 87362664 -165893919 - MER2 DNA MER2_type 0 344 1 1137 250 32 55 chr2 87362664 87362888 -165893695 - L1M4c LINE L1 -4905 2052 1825 52 0 0 0 chr2 87362888 87362940 -165893643 + AT_rich Low_complexity Low_complexity 1 52 0 505 68 87 5 chr2 87362940 87363169 -165893414 + (TA)n Simple_repeat Simple_repeat 1 247 0 632 228 96 42 chr2 87363170 87363491 -165893092 - L1M4c LINE L1 -5034 1821 1270 180 111 0 0 chr2 87363491 87363518 -165893065 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 632 228 96 42 chr2 87363518 87363538 -165893045 - L1M4c LINE L1 -5585 1270 1253 411 198 16 99 chr2 87363701 87363822 -165892761 - MLT1E1 LTR MaLR -239 415 305 553 127 32 8 chr2 87363822 87363948 -165892635 + CT-rich Low_complexity Low_complexity 1 129 0 324 297 51 36 chr2 87365095 87365233 -165891350 - L2 LINE L2 -16 3297 3158 183 222 0 0 chr2 87365466 87365511 -165891072 + (TG)n Simple_repeat Simple_repeat 1 45 0 2221 179 16 12 chr2 87367197 87367622 -165888961 - MSTA LTR MaLR -1 427 1 236 254 0 16 chr2 87367796 87367859 -165888724 + L1M3e LINE L1 10 71 -6959 697 186 32 13 chr2 87367937 87368093 -165888490 + L1MC3 LINE L1 6857 7015 -770 198 0 0 0 chr2 87368104 87368126 -165888457 + (CA)n Simple_repeat Simple_repeat 2 23 0 1262 283 75 37 chr2 87368427 87369081 -165887502 + L1MCc LINE L1 841 1519 -4904 332 214 48 0 chr2 87369083 87369167 -165887416 + L1MCc LINE L1 1823 1910 -5033 1627 243 14 3 chr2 87369171 87369529 -165887054 - MLT1A1 LTR MaLR -3 362 1 699 275 90 64 chr2 87369531 87369977 -165886606 + L1MCc LINE L1 1863 2296 -4826 186 43 0 0 chr2 87369977 87370000 -165886583 + (CATA)n Simple_repeat Simple_repeat 2 24 0 699 275 90 64 chr2 87370000 87370227 -165886356 + L1MCc LINE L1 2296 2754 -4368 2159 52 4 0 chr2 87371211 87371483 -165885100 - L1PA5 LINE L1 -5 6149 5877 263 340 138 27 chr2 87372528 87372716 -165883867 + MIR SINE MIR 28 236 -26 24 0 0 0 chr2 87372751 87372775 -165883808 + AT_rich Low_complexity Low_complexity 1 24 0 370 288 43 0 chr2 87374091 87374230 -165882353 - L1ME4a LINE L1 -202 5919 5775 233 260 41 0 chr2 87374319 87374392 -165882191 - L1ME4a LINE L1 -491 5630 5555 401 248 81 116 chr2 87374408 87374528 -165882055 + MER46C DNA MER2_type 24 147 -191 1529 247 124 29 chr2 87374528 87375051 -165881532 - MER90 LTR ERV1 0 575 3 401 248 81 116 chr2 87375051 87375240 -165881343 + MER46C DNA MER2_type 147 322 -16 1280 85 51 0 chr2 87376044 87376220 -165880363 + LTR24 LTR ERV1 1 185 -282 3410 161 33 52 chr2 87376220 87376908 -165879675 - LTR8 LTR ERV1 0 691 17 1526 129 65 19 chr2 87376965 87377228 -165879355 + LTR24 LTR ERV1 192 466 -1 21 89 0 0 chr2 87377511 87377567 -165879016 + AT_rich Low_complexity Low_complexity 1 56 0 811 233 99 117 chr2 87377834 87378490 -165878093 - LTR48B LTR ERV1 0 644 1 3173 139 56 20 chr2 87378887 87379476 -165877107 + MER4B LTR ERV1 1 610 0 21 57 0 0 chr2 87380764 87380799 -165875784 + AT_rich Low_complexity Low_complexity 1 35 0 244 373 42 28 chr2 87380901 87381043 -165875540 + MIR3 SINE MIR 3 146 -62 192 40 0 0 chr2 87381107 87381132 -165875451 + (TA)n Simple_repeat Simple_repeat 1 25 0 2118 121 0 3 chr2 87381132 87381438 -165875145 - AluSq SINE Alu -8 305 1 426 254 8 16 chr2 87381647 87381773 -165874810 + MER103 DNA DNA 4 128 -38 1609 168 65 7 chr2 87382023 87382333 -165874250 - THE1C LTR MaLR 0 375 48 249 33 0 0 chr2 87382367 87382397 -165874186 + (CA)n Simple_repeat Simple_repeat 2 31 0 23 33 0 0 chr2 87382523 87382553 -165874030 + AT_rich Low_complexity Low_complexity 1 30 0 2276 254 67 23 chr2 87382566 87383762 -165872821 + L1MB4 LINE L1 821 2110 -4536 4962 253 72 69 chr2 87383811 87384128 -165872455 + L1MB4 LINE L1 3088 3403 -3269 1155 208 78 42 chr2 87384128 87384412 -165872171 + AluJo SINE Alu 3 296 -6 4962 253 72 69 chr2 87384412 87385333 -165871250 + L1MB4 LINE L1 3403 4320 -2352 1914 83 91 0 chr2 87385333 87385598 -165870985 + AluSg SINE Alu 1 289 -21 4962 253 72 69 chr2 87385598 87385964 -165870619 + L1MB4 LINE L1 4320 4683 -1989 2160 139 98 3 chr2 87385964 87386353 -165870230 + MSTA LTR MaLR 1 426 -2 4962 253 72 69 chr2 87386353 87388067 -165868516 + L1MB4 LINE L1 4683 6418 -254 811 169 17 6 chr2 87388074 87388246 -165868337 + L1MB4 LINE L1 6503 6676 -2 250 316 139 41 chr2 87389087 87389331 -165867252 - L3 LINE CR1 -218 1359 1092 950 301 112 49 chr2 87389824 87390448 -165866135 + L1M3d LINE L1 572 1094 -5559 363 267 11 11 chr2 87390497 87390587 -165865996 + L1M4c LINE L1 282 371 -6282 311 319 0 11 chr2 87390591 87390685 -165865898 + L1M4c LINE L1 269 361 -6292 1747 259 63 70 chr2 87390724 87392565 -165864018 + L1M4c LINE L1 942 2997 -3735 637 233 58 39 chr2 87392576 87392782 -165863801 + L1M4c LINE L1 3156 3365 -3367 664 185 25 0 chr2 87392783 87392902 -165863681 - LTR12 LTR ERV1 -234 480 359 315 247 0 0 chr2 87392902 87392983 -165863600 - LTR30 LTR ERV1 -98 624 544 1146 138 30 121 chr2 87392983 87393288 -165863295 - LTR12 LTR ERV1 -437 277 1 7703 188 61 75 chr2 87393289 87395176 -165861407 + L1M4c LINE L1 3363 5213 -1519 2238 95 0 13 chr2 87395176 87395480 -165861103 - AluY SINE Alu -11 300 1 7703 188 61 75 chr2 87395480 87395926 -165860657 + L1M4c LINE L1 5213 5664 -1068 816 293 46 11 chr2 87396204 87396484 -165860099 + L1PA15-16 LINE L1 1273 1562 -5287 * 985 234 73 45 chr2 87396471 87396852 -165859731 + L1PB4 LINE L1 690 1077 -5127 1464 39 0 0 chr2 87396873 87397130 -165859453 + (T)n Simple_repeat Simple_repeat 1 257 0 209 206 0 16 chr2 87397230 87397293 -165859290 + G-rich Low_complexity Low_complexity 5 66 0 36 23 0 0 chr2 87397293 87397336 -165859247 + GC_rich Low_complexity Low_complexity 1 43 0 9680 245 20 20 chr2 87397445 87397796 -165858787 + L1PB4 LINE L1 1157 1507 -4696 1611 190 0 17 chr2 87397796 87398086 -165858497 + AluJb SINE Alu 5 289 -23 9680 245 20 20 chr2 87398086 87401318 -165855265 + L1PB4 LINE L1 1507 4738 -1465 3635 170 39 30 chr2 87401421 87402021 -165854562 + L1PB4 LINE L1 5415 6025 -188 2540 141 26 2 chr2 87402021 87402439 -165854144 - MSTA LTR MaLR 0 428 1 3635 170 39 30 chr2 87402439 87402625 -165853958 + L1PB4 LINE L1 6025 6208 -5 3046 117 39 0 chr2 87402646 87403109 -165853474 - L1P LINE L1 -1096 5050 4570 2878 82 19 0 chr2 87403103 87403640 -165852943 + L1P3 LINE L1 5112 5655 -499 * 227 179 15 0 chr2 87404123 87404190 -165852393 + (TG)n Simple_repeat Simple_repeat 2 69 0 232 341 16 41 chr2 87404544 87404667 -165851916 + MIR3 SINE MIR 72 191 -17 352 321 0 0 chr2 87405240 87405346 -165851237 + (GAATG)n Simple_repeat Simple_repeat 5 110 0 1340 199 113 18 chr2 87405763 87406139 -165850444 - MSTB1 LTR MaLR 0 452 13 203 254 0 51 chr2 87406212 87406271 -165850312 + MIR SINE MIR 207 262 0 189 325 26 61 chr2 87406344 87406458 -165850125 - L2 LINE L2 -16 3297 3188 1629 167 0 47 chr2 87406892 87407227 -165849356 - AluJb SINE Alu 0 321 1 231 277 50 82 chr2 87407441 87407600 -165848983 - L2 LINE L2 -1550 1764 1611 279 379 8 8 chr2 87409278 87409402 -165847181 + MIR SINE MIR 18 141 -121 452 345 100 24 chr2 87409415 87410168 -165846415 - L1M4 LINE L1 -2241 3905 3096 259 321 59 27 chr2 87410435 87410622 -165845961 + MLT1L LTR MaLR 421 613 -2 24 32 0 0 chr2 87410778 87410809 -165845774 + AT_rich Low_complexity Low_complexity 1 31 0 2196 101 0 3 chr2 87410855 87411151 -165845432 + AluSg SINE Alu 12 306 -4 1677 313 74 20 chr2 87411162 87411850 -165844733 + L2 LINE L2 1803 2527 -787 251 400 49 16 chr2 87412104 87412289 -165844294 - L2 LINE L2 -292 3021 2831 968 292 63 30 chr2 87412322 87413125 -165843458 - L1MEc LINE L1 -4627 1588 800 327 225 0 14 chr2 87413125 87413196 -165843387 - MLT1C LTR MaLR 0 467 398 494 328 28 6 chr2 87414111 87414291 -165842292 + MLT1F LTR MaLR 1 184 -411 1314 223 124 31 chr2 87414311 87414729 -165841854 + MLT1C LTR MaLR 11 467 0 554 266 125 61 chr2 87414729 87415127 -165841456 + MLT1F LTR MaLR 153 553 -2 1016 211 5 0 chr2 87416381 87416585 -165839998 + MER2 DNA MER2_type 2 206 -139 21 82 0 0 chr2 87416601 87416650 -165839933 + AT_rich Low_complexity Low_complexity 1 49 0 576 155 0 0 chr2 87416718 87416821 -165839762 + MER2 DNA MER2_type 104 206 -139 28 29 0 0 chr2 87416848 87416883 -165839700 + AT_rich Low_complexity Low_complexity 1 35 0 773 268 66 7 chr2 87417129 87417401 -165839182 + L1ME2 LINE L1 5713 6000 -164 1252 146 25 76 chr2 87417495 87417812 -165838771 + L1MA3 LINE L1 5926 6277 -28 188 21 21 83 chr2 87417826 87417874 -165838709 + (TAAAA)n Simple_repeat Simple_repeat 3 47 0 332 299 32 59 chr2 87418304 87418491 -165838092 - Charlie8 DNA MER1_type -2157 260 79 353 272 179 12 chr2 87418537 87418699 -165837884 + MER5A DNA MER1_type 1 189 0 2138 127 0 0 chr2 87418745 87419044 -165837539 - AluSq SINE Alu -14 299 1 1570 143 175 10 chr2 87420552 87420866 -165835717 - MER47A DNA MER2_type 0 366 1 1620 167 33 7 chr2 87421045 87421350 -165835233 - L1PB4 LINE L1 -13 6143 5831 369 197 0 0 chr2 87423849 87423910 -165832673 - MER5A DNA MER1_type 0 189 129 263 140 200 0 chr2 87423916 87423966 -165832617 + MLT1F LTR MaLR 210 269 -298 * 575 173 64 71 chr2 87423950 87424125 -165832458 + MLT1F LTR MaLR 386 540 -2 21 0 0 0 chr2 87424441 87424462 -165832121 + AT_rich Low_complexity Low_complexity 1 21 0 242 377 48 0 chr2 87424628 87424774 -165831809 + MER117 DNA MER1_type 1 153 -44 2101 200 37 30 chr2 87425765 87426226 -165830357 - MLT1C LTR MaLR 0 467 4 258 264 0 0 chr2 87426230 87426283 -165830300 - MLT1G1 LTR MaLR -540 55 3 2558 52 0 3 chr2 87427070 87427378 -165829205 + AluY SINE Alu 2 308 -3 488 315 8 0 chr2 87427744 87427874 -165828709 - Charlie7 DNA MER1_type -2352 260 130 21 95 0 0 chr2 87427887 87427950 -165828633 + AT_rich Low_complexity Low_complexity 1 63 0 390 264 8 16 chr2 87427977 87428102 -165828481 - Charlie7 DNA MER1_type -2482 130 7 2117 123 3 0 chr2 87428826 87429127 -165827456 - AluSx SINE Alu -10 302 1 1990 112 3 7 chr2 87429246 87429541 -165827042 - AluSc SINE Alu -15 294 1 990 252 91 37 chr2 87429998 87430482 -165826101 - LTR1B LTR ERV1 -295 531 22 977 247 23 0 chr2 87430778 87430997 -165825586 + MER58A DNA MER1_type 1 224 0 750 235 5 42 chr2 87431251 87431464 -165825119 + MER3 DNA MER1_type 5 209 0 263 316 42 11 chr2 87431957 87432052 -165824531 + L1MEd LINE L1 589 686 -5433 225 0 0 0 chr2 87432061 87432086 -165824497 + (CA)n Simple_repeat Simple_repeat 2 26 0 2228 209 83 26 chr2 87432188 87432848 -165823735 + MLT1A1-int LTR MaLR 689 1729 -6 1613 201 22 32 chr2 87432854 87433223 -165823360 + MLT1A1 LTR MaLR 1 365 0 490 246 149 31 chr2 87433312 87433507 -165823076 + MER58A DNA MER1_type 1 218 -6 223 186 51 0 chr2 87433512 87433608 -165822975 + (TAGA)n Simple_repeat Simple_repeat 1 100 0 324 324 158 7 chr2 87433626 87433910 -165822673 - L1M4 LINE L1 -2182 3964 3638 371 317 27 16 chr2 87434312 87434498 -165822085 - L1M4 LINE L1 -776 5370 5183 191 88 29 0 chr2 87434932 87434966 -165821617 + (TA)n Simple_repeat Simple_repeat 1 35 0 252 269 25 17 chr2 87435043 87435162 -165821421 - L1M4 LINE L1 -3112 3034 2915 22 56 0 0 chr2 87435167 87435203 -165821380 + AT_rich Low_complexity Low_complexity 1 36 0 219 36 0 0 chr2 87435520 87435548 -165821035 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 420 210 287 5 chr2 87437809 87438004 -165818579 - MIR SINE MIR 0 262 13 193 310 0 17 chr2 87438680 87438738 -165817845 - L2 LINE L2 -16 3297 3241 2192 109 3 0 chr2 87439546 87439840 -165816743 - AluSg SINE Alu -5 305 11 28 61 0 0 chr2 87440508 87440557 -165816026 + AT_rich Low_complexity Low_complexity 1 49 0 5379 145 21 9 chr2 87440614 87441294 -165815289 - L1PA13 LINE L1 -4 6159 5489 2253 92 0 0 chr2 87441294 87441578 -165815005 + AluSc SINE Alu 1 284 -25 5379 145 21 9 chr2 87441578 87443723 -165812860 - L1PA13 LINE L1 -674 5489 3230 338 295 174 16 chr2 87443933 87444123 -165812460 - L1ME2 LINE L1 -235 5863 5644 240 293 54 75 chr2 87444276 87444556 -165812027 - L1ME2 LINE L1 -1442 4638 4365 2247 84 0 3 chr2 87444666 87444965 -165811618 - AluY SINE Alu -13 298 1 378 306 77 75 chr2 87444975 87445416 -165811167 - L1ME2 LINE L1 -1869 4211 3770 1375 261 92 44 chr2 87445967 87446923 -165809660 - HAL1 LINE L1 -593 1914 913 260 49 49 0 chr2 87446994 87447035 -165809548 + (CTTG)n Simple_repeat Simple_repeat 2 44 0 5513 175 24 12 chr2 87447224 87448766 -165807817 - L1MA5 LINE L1 0 6300 4735 2225 98 3 3 chr2 87449174 87449469 -165807114 + AluSq SINE Alu 1 295 -18 233 282 24 12 chr2 87449701 87449786 -165806797 - L1ME2 LINE L1 -5981 89 4 512 269 140 16 chr2 87450249 87450506 -165806077 - L2 LINE L2 -2 3311 3023 1154 183 45 130 chr2 87450738 87451137 -165805446 - MLT1A1 LTR MaLR 0 365 1 207 0 0 0 chr2 87451320 87451343 -165805240 + (T)n Simple_repeat Simple_repeat 1 23 0 483 169 0 0 chr2 87451386 87451475 -165805108 - L1PB1 LINE L1 0 6151 6063 2352 85 0 0 chr2 87451510 87451815 -165804768 - AluY SINE Alu -6 305 1 327 254 156 0 chr2 87454463 87454585 -165801998 - MER104 DNA Tc2 -2 178 38 240 286 57 29 chr2 87455597 87455667 -165800916 + MIR3 SINE MIR 113 184 -24 454 319 43 22 chr2 87456140 87456325 -165800258 + MIR SINE MIR 59 247 -15 1102 267 49 58 chr2 87456571 87457118 -165799465 + L2 LINE L2 2753 3298 -15 791 293 67 15 chr2 87457930 87458200 -165798383 + MLT1J LTR MaLR 66 349 -162 621 286 6 0 chr2 87458213 87458384 -165798199 - MER58A DNA MER1_type -11 213 42 2001 201 57 8 chr2 87458551 87459095 -165797488 + L1MB5 LINE L1 5542 6141 -33 22 35 0 0 chr2 87459106 87459135 -165797448 + AT_rich Low_complexity Low_complexity 1 29 0 210 329 0 0 chr2 87459966 87460036 -165796547 + MIR SINE MIR 72 141 -121 6548 131 27 3 chr2 87460167 87461767 -165794816 - L1MA1 LINE L1 -1 6301 4666 6818 201 32 1 chr2 87461773 87463254 -165793329 - L1MA1 LINE L1 -2101 4045 2519 312 27 0 0 chr2 87463407 87463416 -165793167 + (CA)n Simple_repeat Simple_repeat 1 46 0 312 27 0 0 chr2 87463416 87463453 -165793130 + (CA)n Simple_repeat Simple_repeat 2 38 0 197 122 49 0 chr2 87463568 87463609 -165792974 + A-rich Low_complexity Low_complexity 2 44 0 415 320 83 0 chr2 87464128 87464284 -165792299 + HERV16 LTR ERVL 1 169 -4827 518 339 26 0 chr2 87465171 87465360 -165791223 + HERV16 LTR ERVL 1227 1420 -3576 388 330 19 24 chr2 87466274 87466480 -165790103 + MLT1K LTR MaLR 379 583 -5 378 0 0 0 chr2 87466657 87466699 -165789884 + (TG)n Simple_repeat Simple_repeat 2 43 0 21 0 0 0 chr2 87467720 87467741 -165788842 + AT_rich Low_complexity Low_complexity 1 21 0 301 382 15 7 chr2 87469248 87469384 -165787199 + MIR3 SINE MIR 23 159 -49 230 349 24 0 chr2 87470138 87470221 -165786362 + MIR SINE MIR 162 246 -16 208 365 52 0 chr2 87470695 87470810 -165785773 + L2 LINE L2 2624 2744 -570 274 289 237 31 chr2 87470946 87471174 -165785409 - L3 LINE CR1 -106 1471 1197 593 358 16 10 chr2 87471971 87472224 -165784359 - MIR SINE MIR -9 253 2 1462 184 21 31 chr2 87472679 87472967 -165783616 + AluJo SINE Alu 1 285 -27 3254 87 2 0 chr2 87472967 87473402 -165783181 - L1P3 LINE L1 -363 5791 5356 1705 104 12 12 chr2 87473402 87473652 -165782931 + L1PA7 LINE L1 5900 6150 -4 2598 114 3 11 chr2 87474287 87474665 -165781918 - THE1C LTR MaLR 0 375 1 9350 126 45 38 chr2 87474665 87476234 -165780349 - THE1C-int LTR MaLR 0 1580 1 2652 99 11 11 chr2 87476234 87476609 -165779974 - THE1C LTR MaLR 0 375 1 595 173 99 7 chr2 87476836 87477040 -165779543 - MER74C LTR ERVL -200 260 3 402 311 102 54 chr2 87477093 87477485 -165779098 - MLT1H LTR MaLR -138 411 1 198 0 0 0 chr2 87478547 87478569 -165778014 + (A)n Simple_repeat Simple_repeat 1 22 0 25 51 0 0 chr2 87480784 87480823 -165775760 + AT_rich Low_complexity Low_complexity 1 39 0 196 340 82 41 chr2 87480880 87481027 -165775556 + MIR SINE MIR 44 196 -66 2564 36 0 16 chr2 87481350 87481656 -165774927 - AluY SINE Alu -10 301 1 1534 221 41 39 chr2 87481723 87481815 -165774768 + MLT1B LTR MaLR 1 91 -299 699 203 0 8 chr2 87481815 87481943 -165774640 - FLAM_C SINE Alu -5 128 2 1534 221 41 39 chr2 87481943 87482239 -165774344 + MLT1B LTR MaLR 91 390 0 22 0 0 0 chr2 87482290 87482312 -165774271 + AT_rich Low_complexity Low_complexity 1 22 0 2967 75 124 151 chr2 87483530 87484200 -165772383 + pTR5 LTR ERV1 1787 2438 0 791 181 67 0 chr2 87484203 87484352 -165772231 + Tigger1 DNA MER2_type 204 362 -2056 * 11530 137 31 14 chr2 87484349 87486272 -165770311 + Tigger1 DNA MER2_type 464 2418 0 184 120 40 0 chr2 87486387 87486437 -165770146 + T-rich Low_complexity Low_complexity 2 53 0 22 0 0 0 chr2 87486528 87486550 -165770033 + AT_rich Low_complexity Low_complexity 1 22 0 213 362 0 14 chr2 87486947 87487016 -165769567 - L2 LINE L2 -50 3222 3155 258 299 91 58 chr2 87487182 87487423 -165769160 - L2 LINE L2 -459 2855 2607 280 317 30 30 chr2 87490385 87490486 -165766097 - L2 LINE L2 -22 3291 3191 4591 187 17 47 chr2 87491900 87493150 -165763433 - L1MA10 LINE L1 -14 6320 5108 4929 186 18 21 chr2 87493159 87493527 -165763056 - L1MA5 LINE L1 0 7362 6994 189 107 0 0 chr2 87493527 87493555 -165763028 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1651 196 0 14 chr2 87493558 87493844 -165762739 - AluJb SINE Alu -30 282 1 4929 186 18 21 chr2 87493844 87495430 -165761153 - L1MA5 LINE L1 -370 6992 5410 2939 218 73 22 chr2 87495434 87496228 -165760355 - L1MA5 LINE L1 -4711 2498 1407 2175 125 7 0 chr2 87496228 87496531 -165760052 - AluSx SINE Alu -1 311 7 366 228 147 7 chr2 87496531 87496667 -165759916 - L1MA10 LINE L1 -1032 5114 4960 3353 125 4 20 chr2 87497096 87497246 -165759337 - LOR1a LTR ERV1 0 497 346 3098 110 13 22 chr2 87497246 87497701 -165758882 + MLT2A2 LTR ERVL 3 453 0 3353 125 4 20 chr2 87497701 87498055 -165758528 - LOR1a LTR ERV1 -151 346 1 1322 297 73 30 chr2 87498244 87499360 -165757223 - L1ME3A LINE L1 -4 6560 5390 6084 144 26 3 chr2 87499376 87501239 -165755344 - L1PA10 LINE L1 0 6168 4271 10667 139 12 2 chr2 87501239 87502995 -165753588 + L1PA10 LINE L1 2473 4247 -1899 29368 31 15 1 chr2 87503002 87509032 -165747551 + L1PA2 LINE L1 1 6153 -2 207 0 0 0 chr2 87509094 87509117 -165747466 + (A)n Simple_repeat Simple_repeat 1 23 0 284 77 0 0 chr2 87509117 87509156 -165747427 + L1P LINE L1 4233 4271 -1875 427 237 28 13 chr2 87509158 87509311 -165747272 - L1ME3A LINE L1 -1162 5378 5221 588 264 56 56 chr2 87509369 87509401 -165747182 - L1ME3A LINE L1 -1738 4802 4771 1664 189 7 7 chr2 87509401 87509707 -165746876 - AluJo SINE Alu -6 306 1 588 264 56 56 chr2 87509707 87510159 -165746424 - L1ME3A LINE L1 -1768 4772 4318 8999 198 26 29 chr2 87510471 87513617 -165742966 - L1MA9 LINE L1 0 6312 3179 316 283 96 23 chr2 87513663 87513840 -165742743 - L1ME3A LINE L1 -3568 2972 2783 192 40 0 0 chr2 87513919 87513944 -165742639 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 278 269 95 28 chr2 87514528 87514781 -165741802 - L1ME3A LINE L1 -3992 2729 2460 197 65 32 0 chr2 87514987 87515018 -165741565 + (TCTA)n Simple_repeat Simple_repeat 2 33 0 365 231 127 33 chr2 87515062 87515274 -165741309 - L1ME3A LINE L1 -4443 2097 1866 10733 172 101 23 chr2 87515472 87517649 -165738934 + L1M4c LINE L1 18 2408 -3974 1933 133 3 16 chr2 87517649 87517958 -165738625 + AluSq SINE Alu 1 305 -8 10733 172 101 23 chr2 87517958 87518411 -165738172 + L1M4c LINE L1 2408 2824 -3558 21 0 0 0 chr2 87519231 87519252 -165737331 + AT_rich Low_complexity Low_complexity 1 21 0 252 74 37 49 chr2 87519252 87519333 -165737250 + (TTATA)n Simple_repeat Simple_repeat 4 83 0 247 196 38 0 chr2 87519348 87519481 -165737102 + (TA)n Simple_repeat Simple_repeat 2 139 0 38 39 0 0 chr2 87519499 87519551 -165737032 + AT_rich Low_complexity Low_complexity 1 52 0 1244 268 24 73 chr2 87520558 87520580 -165736003 + MER110 LTR ERV1 1 23 -468 2014 108 9 51 chr2 87520580 87520896 -165735687 - AluSg SINE Alu -7 303 1 1244 268 24 73 chr2 87520896 87521377 -165735206 + MER110 LTR ERV1 23 479 -12 227 250 18 0 chr2 87521392 87521448 -165735135 + MER58 DNA MER1_type 42 98 -117 1690 204 45 6 chr2 87522009 87522446 -165734137 + MER89 LTR ERV1 1 554 -5 2575 85 97 7 chr2 87523656 87524067 -165732516 - LTR7 LTR ERV1 -2 448 1 2366 93 48 13 chr2 87524067 87524442 -165732141 - HERVH LTR ERV1 0 7713 7326 1398 118 18 9 chr2 87524444 87524665 -165731918 - HERVH LTR ERV1 -1894 5819 5597 * 4351 129 22 1 chr2 87524662 87525311 -165731272 - HERVH LTR ERV1 -2564 5149 4488 3236 122 10 6 chr2 87525313 87525813 -165730770 - HERVH LTR ERV1 -3720 3993 3492 873 149 20 0 chr2 87525803 87525951 -165730632 - HERVH LTR ERV1 -4423 3290 3140 * 13293 107 62 38 chr2 87525945 87527410 -165729173 - HERVH LTR ERV1 -4726 2987 1559 183 284 119 28 chr2 87527410 87527519 -165729064 - L2 LINE L2 -763 2551 2433 13293 107 62 38 chr2 87527519 87528780 -165727803 - HERVH LTR ERV1 -6154 1559 1 2521 96 103 5 chr2 87528782 87529190 -165727393 - LTR7 LTR ERV1 -2 448 1 622 317 65 46 chr2 87529205 87529517 -165727066 + HsTC2 DNA Tc2 343 671 -1227 1637 185 10 7 chr2 87529517 87529819 -165726764 + AluJo SINE Alu 1 303 -9 622 317 65 46 chr2 87529819 87530045 -165726538 + HsTC2 DNA Tc2 671 891 -1007 36 0 0 0 chr2 87530111 87530147 -165726436 + AT_rich Low_complexity Low_complexity 1 36 0 331 95 63 0 chr2 87530998 87531061 -165725522 + GA-rich Low_complexity Low_complexity 3 69 0 246 325 48 48 chr2 87531236 87531362 -165725221 + MIR SINE MIR 57 182 -80 197 189 19 38 chr2 87531439 87531492 -165725091 - MIR SINE MIR -114 148 97 2184 204 49 26 chr2 87531818 87531944 -165724639 - L1MB7 LINE L1 -2 6182 6057 5822 240 71 19 chr2 87531944 87534309 -165722274 - L1MD3 LINE L1 -743 5797 3945 1859 242 31 29 chr2 87534326 87534979 -165721604 - L1MD3 LINE L1 -3037 3503 2850 1093 235 58 19 chr2 87535147 87535509 -165721074 + L1ME3A LINE L1 5786 6161 -9 7568 237 59 36 chr2 87535719 87536138 -165720445 - L1MD3 LINE L1 -4241 2299 1891 189 0 0 0 chr2 87536138 87536159 -165720424 + (TTTTG)n Simple_repeat Simple_repeat 3 23 0 7568 237 59 36 chr2 87536159 87536776 -165719807 - L1MD3 LINE L1 -4649 1891 1290 2346 34 41 3 chr2 87536776 87537067 -165719516 - AluY SINE Alu -9 302 1 7568 237 59 36 chr2 87537067 87538264 -165718319 - L1MD3 LINE L1 -5250 1290 14 1024 231 154 25 chr2 87538296 87539224 -165717359 + Zaphod DNA AcHobo 2966 4031 0 183 294 0 44 chr2 87541020 87541088 -165715495 - MIR SINE MIR -124 138 74 255 281 18 42 chr2 87541134 87541240 -165715343 + MIR SINE MIR 60 165 -61 1927 144 0 0 chr2 87541689 87541973 -165714610 + AluSx SINE Alu 1 284 -28 23 0 0 0 chr2 87541974 87541997 -165714586 + AT_rich Low_complexity Low_complexity 1 23 0 357 198 0 0 chr2 87541997 87542088 -165714495 + GA-rich Low_complexity Low_complexity 3 93 0 3584 174 99 23 chr2 87542227 87543012 -165713571 - MER21A LTR ERV1 -6 925 24 487 148 0 34 chr2 87543107 87543195 -165713388 + MER76 LTR ERV 1 85 -603 2076 186 105 20 chr2 87543295 87543753 -165712830 - MER21A LTR ERV1 -411 520 24 1558 214 85 26 chr2 87543847 87544234 -165712349 + MER76 LTR ERV 1 410 -278 305 263 40 0 chr2 87544693 87544769 -165711814 - L2 LINE L2 -262 3010 2932 490 226 65 8 chr2 87596380 87596504 -165660079 + MER94 DNA DNA 1 131 -3 264 248 59 14 chr2 87596921 87597008 -165659575 - MIR SINE MIR -61 147 80 453 255 76 83 chr2 87597152 87597313 -165659270 - L1MC4a LINE L1 -11 6110 5949 339 65 0 0 chr2 87597313 87597359 -165659224 + (CA)n Simple_repeat Simple_repeat 2 47 0 453 255 76 83 chr2 87597359 87597616 -165658967 - L1MC4a LINE L1 -172 5949 5694 264 245 59 14 chr2 87597629 87597716 -165658867 - MIR SINE MIR -61 147 80 23 68 0 0 chr2 87597940 87597984 -165658599 + AT_rich Low_complexity Low_complexity 1 44 0 1571 262 29 3 chr2 87598016 87598398 -165658185 + L2 LINE L2 2403 2794 -520 2034 119 0 46 chr2 87598402 87598729 -165657854 + AluSx SINE Alu 1 312 0 806 172 220 0 chr2 87598859 87599045 -165657538 + MER33 DNA MER1_type 2 228 -96 409 260 13 53 chr2 87599053 87599203 -165657380 + L2 LINE L2 2786 2929 -385 2131 55 5 0 chr2 87599214 87599466 -165657117 - L1PA8 LINE L1 -349 5816 5560 2849 60 3 3 chr2 87599466 87599813 -165656770 + L1PA8 LINE L1 5821 6171 -1 2131 55 5 0 chr2 87599813 87599841 -165656742 - L1P4 LINE L1 -605 5560 5534 901 293 64 17 chr2 87599844 87600189 -165656394 + L2 LINE L2 2953 3313 0 603 250 28 56 chr2 87600253 87600469 -165656114 - MARNA DNA Mariner -201 385 176 812 262 52 5 chr2 87601843 87602053 -165654530 - MIR SINE MIR -38 224 5 1852 125 4 8 chr2 87602519 87602783 -165653800 + AluSx SINE Alu 23 285 -27 465 244 35 0 chr2 87603153 87603268 -165653315 + MIR SINE MIR 124 242 -20 246 32 0 0 chr2 87603358 87603389 -165653194 + (CAAA)n Simple_repeat Simple_repeat 4 34 0 290 232 263 0 chr2 87604572 87604667 -165651916 - MIR3 SINE MIR -52 156 37 1830 253 69 8 chr2 87605082 87605561 -165651022 + L2 LINE L2 2806 3313 0 230 128 0 26 chr2 87606073 87606112 -165650471 + L1MA9 LINE L1 6061 6098 -214 300 191 15 0 chr2 87606113 87606181 -165650402 + L1MA8 LINE L1 6223 6291 0 749 267 78 16 chr2 87606204 87606459 -165650124 + MER102b DNA MER1_type 43 313 -28 187 219 141 47 chr2 87606474 87606538 -165650045 - MIR SINE MIR -181 81 12 350 274 17 17 chr2 87606606 87606723 -165649860 + L2 LINE L2 2941 3057 -215 200 272 25 12 chr2 87608033 87608114 -165648469 + CT-rich Low_complexity Low_complexity 2 83 0 751 183 86 17 chr2 87608669 87608844 -165647739 + MER53 DNA DNA 1 187 -2 434 313 62 70 chr2 87609579 87610065 -165646518 + MER89-int LTR ERV1 2797 3278 -3523 4306 147 66 10 chr2 87610247 87611015 -165645568 - L1MB7 LINE L1 -21 6163 5353 271 289 31 47 chr2 87611229 87611357 -165645226 + MER89-int LTR ERV1 4040 4165 -3227 1788 246 5 0 chr2 87612737 87613177 -165643406 + L1M4 LINE L1 2432 2873 -3273 1963 96 0 11 chr2 87613278 87613549 -165643034 + AluSc SINE Alu 26 293 -16 218 308 0 0 chr2 87614531 87614583 -165642000 + L2 LINE L2 3253 3304 -9 678 201 81 0 chr2 87614663 87614812 -165641771 + ORSL DNA AcHobo 3 163 -112 402 235 47 0 chr2 87614813 87614898 -165641685 + MIR SINE MIR 173 261 -1 1555 237 96 49 chr2 87615835 87616490 -165640093 - HAL1 LINE L1 -5 2502 1817 561 349 45 30 chr2 87616519 87616783 -165639800 + L2 LINE L2 3004 3271 -1 584 213 19 46 chr2 87617238 87617431 -165639152 + MIR SINE MIR 18 199 -62 23 0 0 0 chr2 87618462 87618485 -165638098 + AT_rich Low_complexity Low_complexity 1 23 0 2156 117 3 0 chr2 87618488 87618787 -165637796 + AluSq SINE Alu 1 300 -13 21 36 0 0 chr2 87619121 87619149 -165637434 + AT_rich Low_complexity Low_complexity 1 28 0 185 347 69 0 chr2 87619269 87619341 -165637242 - L2 LINE L2 -2 3270 3194 266 180 25 49 chr2 87619589 87619711 -165636872 + (TCTA)n Simple_repeat Simple_repeat 2 120 0 432 250 117 27 chr2 87620034 87620222 -165636361 + MIR SINE MIR 13 217 -45 591 314 69 48 chr2 87621196 87621530 -165635053 + L2 LINE L2 2928 3268 -4 314 259 106 12 chr2 87622316 87622401 -165634182 - MIR SINE MIR -93 115 23 2550 121 111 5 chr2 87622448 87622835 -165633748 + MSTA LTR MaLR 1 428 0 235 261 0 0 chr2 87624813 87624859 -165631724 - MIR3 SINE MIR -22 186 141 228 279 0 16 chr2 87624975 87625036 -165631547 - MIR SINE MIR -64 144 85 200 307 27 13 chr2 87625141 87625216 -165631367 + MIR3 SINE MIR 4 79 -129 181 323 100 62 chr2 87625223 87625353 -165631230 + MIR3 SINE MIR 38 172 -36 459 248 0 35 chr2 87625498 87625639 -165630944 - MER113 DNA MER1_type? -385 136 1 409 270 151 26 chr2 87625778 87625930 -165630653 - MIR3 SINE MIR -11 197 27 292 273 102 0 chr2 87627803 87627891 -165628692 - MIR SINE MIR -78 130 34 260 286 12 0 chr2 87628783 87628867 -165627716 - MER20 DNA MER1_type 0 219 135 636 278 50 20 chr2 87630359 87630557 -165626026 - MIR SINE MIR 0 262 59 333 172 0 0 chr2 87632220 87632284 -165624299 + (CA)n Simple_repeat Simple_repeat 2 65 0 346 303 0 0 chr2 87633499 87633588 -165622995 + MER81 DNA DNA 7 95 -19 5533 188 23 19 chr2 87633617 87634954 -165621629 - L1MD2 LINE L1 -3 6356 3973 1957 205 49 31 chr2 87634957 87635410 -165621173 + MLT1C LTR MaLR 7 467 0 2407 152 14 5 chr2 87635413 87635842 -165620741 - L1MD2 LINE L1 -2169 3977 3545 1345 146 5 32 chr2 87636081 87636300 -165620283 + MER20 DNA MER1_type 7 219 0 258 346 0 0 chr2 87637908 87638015 -165618568 + C-rich Low_complexity Low_complexity 1 107 0 2275 104 0 0 chr2 87640217 87640525 -165616058 + AluY SINE Alu 1 308 -3 278 250 99 62 chr2 87640879 87641071 -165615512 + L1ME4a LINE L1 5923 6121 0 223 282 129 35 chr2 87641557 87641642 -165614941 + L2 LINE L2 3217 3309 -4 330 314 155 19 chr2 87642390 87642597 -165613986 - MIR SINE MIR 0 262 28 2318 179 14 36 chr2 87642635 87642668 -165613915 - MLT2D LTR ERVL -4 410 378 330 26 0 0 chr2 87642668 87642707 -165613876 + (TG)n Simple_repeat Simple_repeat 2 40 0 2318 179 14 36 chr2 87642707 87643092 -165613491 - MLT2D LTR ERVL -36 378 1 38091 51 4 1 chr2 87643267 87648784 -165607799 - L1PA4 LINE L1 0 6155 623 731 47 0 0 chr2 87648784 87648870 -165607713 - L1PA4 LINE L1 -6050 96 11 213 238 0 0 chr2 87649063 87649105 -165607478 + L2 LINE L2 3261 3302 -11 222 215 0 15 chr2 87650049 87650060 -165606523 + (TAA)n Simple_repeat Simple_repeat 3 13 -53 2592 121 77 46 chr2 87650060 87650475 -165606108 - MSTA LTR MaLR 0 428 1 222 215 0 15 chr2 87650475 87650528 -165606055 + (TAA)n Simple_repeat Simple_repeat 13 66 0 555 252 98 0 chr2 87650576 87650719 -165605864 - MIR SINE MIR -89 173 17 465 217 118 33 chr2 87650965 87651117 -165605466 - MIR SINE MIR -1 261 97 510 115 35 0 chr2 87651424 87651511 -165605072 + L1MB4 LINE L1 6091 6180 0 534 389 87 12 chr2 87651710 87652288 -165604295 + L2 LINE L2 189 809 -2505 1153 175 25 10 chr2 87652290 87652490 -165604093 - MER3 DNA MER1_type -2 207 5 849 214 101 6 chr2 87652560 87652719 -165603864 + FAM SINE Alu 2 175 0 312 153 0 0 chr2 87652742 87652801 -165603782 + Alu SINE Alu 243 301 -1 7139 120 32 16 chr2 87652853 87653672 -165602911 + L1PB1 LINE L1 1 806 -6061 9546 45 2 1 chr2 87653672 87654742 -165601841 + MER11C LTR ERVK 1 1071 0 7139 120 32 16 chr2 87654742 87655939 -165600644 + L1PB1 LINE L1 806 6866 -1 182 234 85 0 chr2 87655990 87656037 -165600546 - L2 LINE L2 -37 3235 3185 276 161 71 0 chr2 87656037 87656093 -165600490 + L1M4 LINE L1 4720 4779 -1367 780 245 7 62 chr2 87656112 87656269 -165600314 + L1M4 LINE L1 4874 5011 -1135 2370 92 0 7 chr2 87656269 87656573 -165600010 + AluSc SINE Alu 1 302 -7 780 245 7 62 chr2 87656573 87656688 -165599895 + L1M4 LINE L1 5011 5131 -1015 990 178 22 6 chr2 87656694 87656874 -165599709 + L1MD1 LINE L1 6060 6242 0 432 312 52 6 chr2 87656874 87657047 -165599536 - L2 LINE L2 -1295 2019 1839 766 148 39 8 chr2 87657053 87657181 -165599402 + MSTB LTR MaLR 215 346 -80 26 0 0 0 chr2 87657181 87657207 -165599376 + AT_rich Low_complexity Low_complexity 1 26 0 261 159 0 0 chr2 87657207 87657270 -165599313 + GA-rich Low_complexity Low_complexity 2 64 0 2071 101 18 0 chr2 87657272 87657549 -165599034 - AluSx SINE Alu -30 282 1 1375 130 0 0 chr2 87657634 87657826 -165598757 + L1PA16 LINE L1 12 203 -6646 * 6512 129 25 89 chr2 87657825 87659123 -165597460 + L1PA16 LINE L1 604 1819 -5030 12839 211 25 21 chr2 87659241 87661792 -165594791 + L1PA16 LINE L1 2313 4854 -2015 2350 166 31 24 chr2 87661792 87662215 -165594368 + MSTB LTR MaLR 1 426 0 12839 211 25 21 chr2 87662215 87663977 -165592606 + L1PA16 LINE L1 4854 6642 -227 1618 159 55 0 chr2 87663977 87664248 -165592335 + AluJb SINE Alu 1 286 -26 12839 211 25 21 chr2 87664248 87664468 -165592115 + L1PA16 LINE L1 6642 6860 -9 1532 305 143 61 chr2 87664482 87664797 -165591786 - L2 LINE L2 -1471 1843 1555 1682 173 0 43 chr2 87664797 87665121 -165591462 - AluJb SINE Alu -2 310 1 1532 305 143 61 chr2 87665121 87665417 -165591166 - L2 LINE L2 -1759 1555 1285 2218 122 22 33 chr2 87665417 87665785 -165590798 - THE1B LTR MaLR 0 364 1 1532 305 143 61 chr2 87665785 87666702 -165589881 - L2 LINE L2 -2029 1285 189 211 348 72 55 chr2 87667184 87667420 -165589163 + L2 LINE L2 1236 1475 -1839 248 0 0 30 chr2 87667508 87667541 -165589042 + (TC)n Simple_repeat Simple_repeat 1 32 0 * 414 57 0 0 chr2 87667540 87667593 -165588990 + (CA)n Simple_repeat Simple_repeat 1 53 0 1293 122 0 0 chr2 87667643 87667823 -165588760 + AluSg/x SINE Alu 126 305 -7 216 160 20 40 chr2 87667928 87667978 -165588605 + GA-rich Low_complexity Low_complexity 2 50 0 20349 70 4 1 chr2 87668123 87670897 -165585686 + L1P LINE L1 4 2786 -3360 290 136 0 0 chr2 87671000 87671044 -165585539 + MER74B LTR ERVL 10 53 -569 1506 236 28 13 chr2 87671076 87671474 -165585109 + MER74B LTR ERVL 209 612 -10 7022 216 27 9 chr2 87671498 87671986 -165584597 + L1M4 LINE L1 3494 3972 -2174 2304 178 34 2 chr2 87671986 87672401 -165584182 - MSTB1 LTR MaLR 0 432 5 7022 216 27 9 chr2 87672401 87673703 -165582880 + L1M4 LINE L1 3972 5316 -830 7039 144 28 8 chr2 87673704 87674937 -165581646 + L1M3f LINE L1 2 1259 -4069 6479 230 75 5 chr2 87674941 87676464 -165580119 + L1M2 LINE L1 2 1632 -5217 1269 298 77 37 chr2 87676466 87677087 -165579496 + MER109 Unknown Unknown 1617 2262 -170 275 299 56 9 chr2 87678339 87678446 -165578137 + L2 LINE L2 2953 3064 -208 224 111 56 0 chr2 87678776 87678812 -165577771 - MIR3 SINE MIR -50 158 121 353 182 102 23 chr2 87678817 87678905 -165577678 - MIR3 SINE MIR -54 154 60 184 274 0 20 chr2 87678969 87679020 -165577563 + L2 LINE L2 3264 3313 0 363 255 31 20 chr2 87679250 87679348 -165577235 - L2 LINE L2 -1015 2299 2201 12898 40 1 0 chr2 87679359 87681036 -165575547 - L1P LINE L1 -1816 4330 2653 561 204 31 41 chr2 87681147 87681343 -165575240 - L1ME2 LINE L1 -93 6071 5878 323 280 40 32 chr2 87681839 87681964 -165574619 + L3 LINE CR1 540 665 -912 643 289 35 0 chr2 87682116 87682313 -165574270 + L3 LINE CR1 653 856 -721 2294 220 123 30 chr2 87683355 87684056 -165572527 - MER21B LTR ERV1 -51 812 47 471 191 0 0 chr2 87684057 87684141 -165572442 - MER21B LTR ERV1 -768 95 12 1970 121 21 0 chr2 87684973 87685253 -165571330 - AluSx SINE Alu -26 286 1 264 263 46 72 chr2 87687444 87687596 -165568987 - MIR SINE MIR -50 212 65 479 244 28 103 chr2 87687601 87687814 -165568769 - MIR SINE MIR -9 253 57 393 305 76 27 chr2 87688329 87688591 -165567992 + L1ME4a LINE L1 5124 5398 -748 1830 215 92 17 chr2 87688646 87688863 -165567720 + L1ME4a LINE L1 5477 5676 -445 1895 159 0 7 chr2 87688863 87689152 -165567431 - AluJo SINE Alu -25 287 1 1830 215 92 17 chr2 87689152 87689534 -165567049 + L1ME4a LINE L1 5676 6121 0 651 167 92 0 chr2 87690278 87690398 -165566185 - FRAM SINE Alu -6 170 40 556 290 80 18 chr2 87691018 87691242 -165565341 - MIR SINE MIR -11 251 14 22 56 0 0 chr2 87691327 87691363 -165565220 + AT_rich Low_complexity Low_complexity 1 36 0 2359 90 6 0 chr2 87691420 87691731 -165564852 + AluSq SINE Alu 1 313 0 649 259 98 26 chr2 87691839 87692218 -165564365 - L1MC5 LINE L1 -47 7914 7509 272 214 0 29 chr2 87692859 87692929 -165563654 + L2 LINE L2 3182 3249 -23 2270 119 27 10 chr2 87694421 87694823 -165561760 - Cheshire DNA MER1_type 0 2420 2012 25 0 0 0 chr2 87694823 87694848 -165561735 + AT_rich Low_complexity Low_complexity 1 25 0 311 188 58 0 chr2 87694853 87694922 -165561661 - L1MD3 LINE L1 -18 7977 7905 4014 190 14 15 chr2 87694925 87696188 -165560395 - L1MB8 LINE L1 -17 6161 4903 1298 186 115 26 chr2 87696188 87696537 -165560046 - L1MC3 LINE L1 -96 7689 7310 1496 132 79 0 chr2 87696541 87696821 -165559762 - Cheshire DNA MER1_type -389 2031 1730 1870 110 103 0 chr2 87696821 87697094 -165559489 - AluSx SINE Alu -11 301 1 1940 159 3 0 chr2 87697096 87697391 -165559192 - AluJb SINE Alu -16 296 1 1094 151 8 101 chr2 87697400 87697565 -165559018 - L1M4 LINE L1 -521 5663 5529 2173 138 3 0 chr2 87697565 87697876 -165558707 - AluSx SINE Alu 0 312 1 1094 151 8 101 chr2 87697876 87697968 -165558615 - L1M4 LINE L1 -655 5529 5430 1299 127 39 0 chr2 87697968 87698197 -165558386 - Cheshire DNA MER1_type -678 1742 1505 389 277 0 0 chr2 87698191 87698285 -165558298 - Cheshire DNA MER1_type -2314 106 13 * 404 82 27 0 chr2 87698511 87698584 -165557999 + (TTTTA)n Simple_repeat Simple_repeat 3 77 0 712 213 134 42 chr2 87698898 87699137 -165557446 - MIR SINE MIR 0 262 2 800 210 55 10 chr2 87699271 87699471 -165557112 + MER3 DNA MER1_type 1 209 0 1277 63 29 0 chr2 87699838 87700013 -165556570 - L1PA6 LINE L1 -6 6148 5969 3850 186 87 28 chr2 87700230 87701490 -165555093 - L1MD2 LINE L1 0 6359 5025 1759 176 3 37 chr2 87702156 87702479 -165554104 + AluJo SINE Alu 1 312 0 200 279 0 0 chr2 87702772 87702815 -165553768 + L2 LINE L2 3215 3257 -15 183 235 0 0 chr2 87703132 87703166 -165553417 + L2 LINE L2 3268 3301 -12 2339 180 59 11 chr2 87703725 87704298 -165552285 + L1MDa LINE L1 1674 2274 -4266 769 186 5 30 chr2 87704299 87704498 -165552085 + L1MDa LINE L1 3173 3366 -3174 718 294 30 47 chr2 87704495 87704922 -165551661 + L1M3d LINE L1 183 823 -5480 * 262 303 25 62 chr2 87704981 87705143 -165551440 + L1M3d LINE L1 934 1089 -5214 3291 239 122 15 chr2 87705294 87706457 -165550126 + L1M3d LINE L1 777 2055 -4329 2079 108 49 0 chr2 87706457 87706743 -165549840 + AluSq SINE Alu 1 300 -13 3291 239 122 15 chr2 87706743 87707133 -165549450 + L1M3d LINE L1 2055 2402 -3982 1116 164 3 153 chr2 87707129 87707288 -165549295 + L1 LINE L1 4763 4838 -1308 * 3335 86 23 8 chr2 87707288 87707765 -165548818 + L1PA11 LINE L1 5687 6171 -3 1116 164 3 153 chr2 87707765 87707970 -165548613 + L1 LINE L1 4838 5072 -1074 248 440 0 9 chr2 87708244 87708353 -165548230 - L2 LINE L2 -53 3219 3112 1149 164 30 17 chr2 87708448 87708680 -165547903 + L1PB4 LINE L1 5922 6156 0 315 0 0 0 chr2 87708777 87708812 -165547771 + (CA)n Simple_repeat Simple_repeat 2 36 0 484 297 139 27 chr2 87709930 87710260 -165546323 - L1MC4a LINE L1 -1842 5966 5600 859 240 86 3 chr2 87710362 87710654 -165545929 - L1MC4 LINE L1 -190 7852 7537 1724 223 11 86 chr2 87710757 87711408 -165545175 - L1MDa LINE L1 -3326 3080 2479 1718 109 82 55 chr2 87711408 87711737 -165544846 - MER44D DNA MER2_type -1 608 1 1853 205 96 13 chr2 87711763 87712377 -165544206 - L1MDa LINE L1 -3995 2411 1747 433 158 10 0 chr2 87712371 87712472 -165544111 - L1MDa LINE L1 -5141 1268 1167 * 310 292 25 42 chr2 87712496 87712616 -165543967 + L1MC5 LINE L1 7451 7568 -393 752 91 8 30 chr2 87712627 87712759 -165543824 - L1MA7 LINE L1 0 6291 6163 1802 173 10 13 chr2 87712761 87712947 -165543636 - AluJb SINE Alu 0 312 126 189 0 0 0 chr2 87712947 87712968 -165543615 + (TG)n Simple_repeat Simple_repeat 2 22 0 1802 173 10 13 chr2 87712968 87713094 -165543489 - AluJb SINE Alu -186 126 1 1724 144 22 58 chr2 87713118 87713151 -165543432 - L1MA7 LINE L1 -130 6161 6128 880 94 0 0 chr2 87713151 87713278 -165543305 - L1PB1 LINE L1 -4 6147 6021 1724 144 22 58 chr2 87713278 87713606 -165542977 - L1MA7 LINE L1 -163 6128 5813 * 3748 225 121 15 chr2 87713589 87714654 -165541929 - L1MDa LINE L1 -5225 1184 7 297 140 0 0 chr2 87714661 87714711 -165541872 + Charlie1 DNA MER1_type 2712 2761 0 393 287 0 0 chr2 87715947 87716041 -165540542 - L2 LINE L2 -11 3261 3168 908 192 33 0 chr2 87716516 87716698 -165539885 + MER3 DNA MER1_type 1 188 -21 419 68 0 0 chr2 87716985 87717044 -165539539 + L1PA3 LINE L1 6097 6155 0 2190 101 3 0 chr2 87717110 87717396 -165539187 + AluSp SINE Alu 1 287 -26 1284 79 0 0 chr2 87717414 87717618 -165538965 + (TA)n Simple_repeat Simple_repeat 1 204 0 207 0 0 0 chr2 87717617 87717640 -165538943 + (GA)n Simple_repeat Simple_repeat 2 24 0 * 309 214 0 0 chr2 87718191 87718247 -165538336 - L2 LINE L2 0 3272 3217 375 190 80 0 chr2 87718713 87718813 -165537770 + L1ME4a LINE L1 6012 6119 -2 495 232 35 12 chr2 87719219 87719477 -165537106 - L1ME4a LINE L1 -2 6119 5798 195 261 0 0 chr2 87721507 87721553 -165535030 - L2 LINE L2 -12 3260 3215 1384 266 18 18 chr2 87722488 87722988 -165533595 + L1 LINE L1 2380 2879 -3267 2362 106 3 0 chr2 87723009 87723339 -165533244 - L1PB1 LINE L1 -5 6146 5816 2502 110 10 0 chr2 87723339 87723722 -165532861 + L1P5 LINE L1 5396 5782 -369 2251 106 0 0 chr2 87723723 87724015 -165532568 + AluSx SINE Alu 1 292 -20 264 130 0 0 chr2 87724036 87724082 -165532501 + (TA)n Simple_repeat Simple_repeat 1 46 0 1971 190 62 50 chr2 87724090 87724786 -165531797 + L1 LINE L1 2865 3568 -2578 1153 173 3 73 chr2 87724999 87725288 -165531295 + AluJo SINE Alu 38 306 -6 272 173 0 0 chr2 87725291 87725343 -165531240 + L1 LINE L1 3700 3751 -2395 182 222 0 0 chr2 87726821 87726857 -165529726 - L2 LINE L2 -16 3297 3262 192 256 0 0 chr2 87727602 87727641 -165528942 - L2 LINE L2 -12 3301 3263 1243 247 24 79 chr2 87727702 87727962 -165528621 - L1MDa LINE L1 -5987 553 280 270 0 0 0 chr2 87727962 87727992 -165528591 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1243 247 24 79 chr2 87727992 87728075 -165528508 - L1MDa LINE L1 -6260 280 194 2160 112 0 0 chr2 87728075 87728371 -165528212 + AluY SINE Alu 1 296 -15 1243 247 24 79 chr2 87728371 87728532 -165528051 - L1MDa LINE L1 -6346 194 76 180 0 0 0 chr2 87729977 87729997 -165526586 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 589 216 20 0 chr2 87730514 87730662 -165525921 - L1MA10 LINE L1 -2 6332 6182 441 0 0 0 chr2 87731002 87731051 -165525532 + (TG)n Simple_repeat Simple_repeat 2 50 0 183 329 49 0 chr2 87731537 87731619 -165524964 + L2 LINE L2 1355 1440 -1874 182 356 0 0 chr2 87731685 87731744 -165524839 - L2 LINE L2 0 3272 3214 332 209 58 65 chr2 87732729 87732868 -165523715 + MER103 DNA DNA 10 147 -19 868 78 78 0 chr2 87733814 87733943 -165522640 + MER85 DNA T2_type 1 139 0 240 282 64 0 chr2 87734363 87734441 -165522142 - MIR SINE MIR 0 262 180 720 297 16 31 chr2 87734724 87734962 -165521621 - MIR SINE MIR -21 241 7 22 35 0 0 chr2 87738760 87738789 -165517794 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 87739201 87739222 -165517361 + AT_rich Low_complexity Low_complexity 1 21 0 2306 92 0 0 chr2 87739343 87739635 -165516948 - AluSg SINE Alu -15 295 4 215 293 22 33 chr2 87739915 87740008 -165516575 + MIR3 SINE MIR 77 169 -39 24 0 0 0 chr2 87741659 87741683 -165514900 + GC_rich Low_complexity Low_complexity 1 24 0 276 77 0 0 chr2 87741790 87741829 -165514754 + (TA)n Simple_repeat Simple_repeat 1 39 0 180 0 0 0 chr2 87742255 87742275 -165514308 + (A)n Simple_repeat Simple_repeat 1 20 0 330 269 33 115 chr2 87743728 87743910 -165512673 - MER5B DNA MER1_type -7 171 5 333 277 43 0 chr2 87743939 87744033 -165512550 + MER5A DNA MER1_type 92 189 0 973 198 6 0 chr2 87744061 87744223 -165512360 + MER5A DNA MER1_type 1 163 -26 284 175 16 0 chr2 87744278 87744341 -165512242 + GA-rich Low_complexity Low_complexity 2 65 0 498 291 97 6 chr2 87744740 87744905 -165511678 - MIR SINE MIR -71 191 12 972 216 38 9 chr2 87744908 87745121 -165511462 + MER20 DNA MER1_type 1 219 0 24 0 0 0 chr2 87746596 87746620 -165509963 + AT_rich Low_complexity Low_complexity 1 24 0 192 416 30 0 chr2 87746657 87746758 -165509825 - MIR3 SINE MIR -48 160 57 2380 97 7 0 chr2 87747104 87747414 -165509169 + AluSx SINE Alu 1 312 0 290 281 5 122 chr2 87747678 87747794 -165508789 + MIR SINE MIR 41 126 -136 2352 66 0 20 chr2 87747794 87748098 -165508485 + AluY SINE Alu 1 298 -13 290 281 5 122 chr2 87748098 87748177 -165508406 + MIR SINE MIR 126 213 -49 207 0 0 0 chr2 87748195 87748218 -165508365 + (A)n Simple_repeat Simple_repeat 1 23 0 201 289 0 19 chr2 87749172 87749224 -165507359 - L2 LINE L2 -12 3301 3251 * 322 254 0 0 chr2 87749196 87749267 -165507316 - MIR SINE MIR -29 233 163 222 37 0 0 chr2 87750754 87750781 -165505802 + (CA)n Simple_repeat Simple_repeat 2 28 0 638 135 35 167 chr2 87751758 87751885 -165504698 + MLT2D LTR ERVL 234 376 -88 1966 154 13 0 chr2 87751885 87752183 -165504400 + AluSx SINE Alu 1 302 -10 456 19 0 0 chr2 87752189 87752242 -165504341 + (TG)n Simple_repeat Simple_repeat 2 54 0 638 135 35 167 chr2 87752242 87752317 -165504266 + MLT2D LTR ERVL 381 464 0 262 196 0 0 chr2 87753052 87753108 -165503475 + MLT2B1 LTR ERVL 465 520 0 2605 29 10 3 chr2 87753124 87753436 -165503147 - AluYb8 SINE Alu -4 314 1 292 290 131 51 chr2 87754270 87754605 -165501978 + L1ME4a LINE L1 5535 5896 -225 434 308 58 32 chr2 87754821 87755058 -165501525 + MIR SINE MIR 16 257 -5 361 282 7 35 chr2 87755197 87755339 -165501244 + MIR SINE MIR 123 260 -2 2023 83 63 33 chr2 87756169 87756471 -165500112 - AluY SINE Alu 0 311 1 189 220 0 60 chr2 87756506 87756556 -165500027 + L3b LINE CR1 1290 1336 -247 181 339 17 0 chr2 87757072 87757131 -165499452 - MER5A DNA MER1_type -6 183 124 521 237 151 7 chr2 87757319 87757471 -165499112 - MER5A DNA MER1_type 0 189 16 240 304 17 52 chr2 87758002 87758117 -165498466 - MIR3 SINE MIR -7 201 91 2024 140 22 38 chr2 87758285 87758765 -165497818 - L1MCa LINE L1 -4628 1798 1234 * 3089 243 41 13 chr2 87758761 87759746 -165496837 - L1M4b LINE L1 -2543 4414 3403 5147 41 13 5 chr2 87759815 87760450 -165496133 + L1PA6 LINE L1 5515 6154 0 1020 220 114 5 chr2 87760572 87760949 -165495634 - L1M4b LINE L1 -3600 3357 2940 1964 260 31 8 chr2 87760949 87761468 -165495115 - MER82 DNA MER2_type -1 652 122 1448 257 95 24 chr2 87761476 87761927 -165494656 - MLT2B1 LTR ERVL -35 485 3 396 204 19 29 chr2 87761930 87762033 -165494550 - L1M4b LINE L1 -4747 2391 2290 36 23 0 0 chr2 87762044 87762087 -165494496 + AT_rich Low_complexity Low_complexity 1 43 0 3092 27 8 0 chr2 87762087 87762459 -165494124 - L1PA2 LINE L1 0 6155 5781 3709 283 81 29 chr2 87762460 87763690 -165492893 - L1M4b LINE L1 -4815 2144 766 1927 206 7 46 chr2 87763690 87764121 -165492462 - MLT2D LTR ERVL 0 414 1 3709 283 81 29 chr2 87764121 87764927 -165491656 - L1M4b LINE L1 -6193 766 3 3360 201 76 95 chr2 87766368 87767406 -165489177 - HERVL74 LTR ERVL -3587 2098 1081 433 175 19 29 chr2 87768706 87768809 -165487774 + L1PA11 LINE L1 6066 6167 -7 349 231 259 27 chr2 87769673 87769820 -165486763 - MER5A DNA MER1_type 0 189 9 310 274 74 78 chr2 87771991 87772221 -165484362 - L2 LINE L2 -1 3312 3084 295 284 19 135 chr2 87772192 87772615 -165483968 - L2 LINE L2 -549 2765 2392 * 406 269 39 10 chr2 87773587 87773691 -165482892 + MIR SINE MIR 36 142 -66 736 256 11 6 chr2 87773858 87774034 -165482549 - MER45A DNA AcHobo -1 177 1 749 291 124 15 chr2 87774240 87774570 -165482013 + L3 LINE CR1 1212 1577 0 561 204 41 118 chr2 87774824 87774926 -165481657 + L1ME3 LINE L1 5959 6037 -125 1152 195 189 10 chr2 87774926 87775233 -165481350 - MER47A DNA MER2_type -3 363 2 561 204 41 118 chr2 87775233 87775351 -165481232 + L1ME3 LINE L1 6037 6162 0 332 233 22 56 chr2 87775363 87775453 -165481130 + MER5A DNA MER1_type 101 187 -2 185 320 10 70 chr2 87775453 87775547 -165481036 - MIR SINE MIR -63 145 58 1388 66 0 0 chr2 87775943 87776124 -165480459 + L1PA8 LINE L1 5992 6172 0 444 199 76 30 chr2 87776216 87776347 -165480236 - MIR SINE MIR -101 161 25 2142 125 48 6 chr2 87777161 87777498 -165479085 + MLT1B LTR MaLR 1 351 -39 2177 104 3 3 chr2 87777499 87777786 -165478797 + AluSg SINE Alu 1 287 -23 43439 43 3 1 chr2 87777801 87783943 -165472640 + L1PA4 LINE L1 7 6155 0 385 83 0 0 chr2 87783948 87783996 -165472587 + MLT1B LTR MaLR 343 390 0 1319 256 135 24 chr2 87785127 87785718 -165470865 - L1ME3A LINE L1 -7 6097 5441 2145 268 69 50 chr2 87785727 87787684 -165468899 - L1ME LINE L1 -2322 3758 1767 1683 266 36 22 chr2 87787735 87788479 -165468104 - L1ME LINE L1 -4679 1582 792 4041 211 47 32 chr2 87788648 87790229 -165466354 - L1MB5 LINE L1 -12 6660 5039 1804 154 19 22 chr2 87790229 87790540 -165466043 + AluSx SINE Alu 3 312 0 4041 211 47 32 chr2 87790540 87791089 -165465494 - L1MB5 LINE L1 -1633 5039 4500 268 313 8 15 chr2 87791090 87791221 -165465362 - L1MB5 LINE L1 -5580 962 833 652 278 80 63 chr2 87791223 87791637 -165464946 - L1MB5 LINE L1 -5775 767 347 276 289 86 59 chr2 87792916 87793068 -165463515 - L3 LINE CR1 -206 1371 1216 368 333 58 7 chr2 87796202 87796340 -165460243 + MIR SINE MIR 10 154 -108 258 172 11 46 chr2 87796840 87796927 -165459656 + CT-rich Low_complexity Low_complexity 3 86 0 300 350 94 22 chr2 87797614 87797837 -165458746 - MIR SINE MIR -18 244 6 419 80 160 0 chr2 87798449 87798524 -165458059 - L1MA5 LINE L1 -6 6294 6208 2411 195 48 31 chr2 87798615 87798864 -165457719 - L1MB7 LINE L1 -9 6175 5927 504 295 44 35 chr2 87798864 87799206 -165457377 - L1ME4a LINE L1 -198 5923 5579 417 381 7 0 chr2 87799352 87799499 -165457084 + MIR3 SINE MIR 58 205 -3 281 311 92 36 chr2 87800563 87800759 -165455824 - L3 LINE CR1 -158 1419 1213 278 309 145 0 chr2 87800819 87800971 -165455612 + LTR68 LTR ERV1 7 180 -560 244 372 21 26 chr2 87801413 87801604 -165454979 + L2 LINE L2 2209 2398 -916 309 250 167 45 chr2 87801714 87801870 -165454713 - L2 LINE L2 -27 3286 3112 4914 235 111 29 chr2 87803186 87803574 -165453009 + L1MDa LINE L1 587 942 -5598 5176 65 17 0 chr2 87803574 87804238 -165452345 - L1PA7 LINE L1 0 6154 5480 4914 235 111 29 chr2 87804238 87804466 -165452117 + L1MDa LINE L1 942 1150 -5390 2169 68 0 0 chr2 87804466 87804732 -165451851 + AluY SINE Alu 31 296 -15 4914 235 111 29 chr2 87804732 87805280 -165451303 + L1MDa LINE L1 1150 1652 -4888 252 0 0 0 chr2 87805280 87805308 -165451275 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 4914 235 111 29 chr2 87805308 87805820 -165450763 + L1MDa LINE L1 1652 2403 -4137 1312 259 67 90 chr2 87805829 87806427 -165450156 + L1M4 LINE L1 20 603 -5939 * 6721 181 25 50 chr2 87806410 87806870 -165449713 + L1MC1 LINE L1 1 471 -5955 2046 9 0 0 chr2 87806870 87807092 -165449491 + AluYb8 SINE Alu 84 305 -13 6721 181 25 50 chr2 87807092 87808199 -165448384 + L1MC1 LINE L1 471 1529 -4897 2727 143 13 29 chr2 87808358 87809087 -165447496 + L1MA5A LINE L1 5061 5760 -537 1328 156 33 4 chr2 87809087 87809330 -165447253 + L1PA16 LINE L1 5910 6159 -7 2727 143 13 29 chr2 87809330 87809850 -165446733 + L1MA5A LINE L1 5760 6287 -10 2245 83 3 20 chr2 87809887 87810189 -165446394 + AluY SINE Alu 1 297 -14 2303 233 20 16 chr2 87810189 87810933 -165445650 + L1MC1 LINE L1 2814 3560 -2866 4090 204 41 24 chr2 87811020 87812639 -165443944 + L1MC1 LINE L1 4845 6486 -127 2874 203 36 30 chr2 87812717 87813438 -165443145 + L1M4 LINE L1 630 1354 -5188 * 2979 206 14 13 chr2 87813432 87814120 -165442463 + L1MB7 LINE L1 5476 6164 -20 1066 138 0 0 chr2 87814156 87814335 -165442248 - AluSq SINE Alu 0 312 134 2109 96 28 7 chr2 87814335 87814626 -165441957 - AluSx SINE Alu -15 297 1 1989 235 78 51 chr2 87814626 87815745 -165440838 + L1M4 LINE L1 2508 3662 -2982 564 306 6 12 chr2 87816431 87816601 -165439982 + MER5B DNA MER1_type 4 172 -6 852 231 12 0 chr2 87816619 87816788 -165439795 + MER5B DNA MER1_type 2 172 -6 260 89 0 22 chr2 87816890 87816935 -165439648 + (GAAAA)n Simple_repeat Simple_repeat 2 45 0 277 308 102 28 chr2 87817067 87817208 -165439375 - MER5B DNA MER1_type -28 161 1 612 281 57 44 chr2 87817397 87817810 -165438773 + MER77 LTR ERV1 304 688 -8 354 288 106 0 chr2 87818304 87818464 -165438119 - MLT1J LTR MaLR -334 177 1 435 256 41 41 chr2 87818557 87818729 -165437854 + L2 LINE L2 3136 3307 -6 2259 119 0 0 chr2 87819504 87819814 -165436769 + AluSg SINE Alu 1 310 0 23 92 0 0 chr2 87820138 87820203 -165436380 + AT_rich Low_complexity Low_complexity 1 65 0 311 374 0 9 chr2 87820457 87820572 -165436011 + MIR SINE MIR 33 146 -62 1562 238 149 10 chr2 87820896 87821405 -165435178 + MLT1E2 LTR MaLR 1 580 -46 1024 261 47 85 chr2 87821468 87821716 -165434867 + MER77 LTR ERV1 90 346 -349 1279 153 128 73 chr2 87821716 87821820 -165434763 + AluJo SINE Alu 4 101 -211 339 85 0 0 chr2 87821820 87821867 -165434716 + (CA)n Simple_repeat Simple_repeat 2 48 0 1279 153 128 73 chr2 87821867 87822050 -165434533 + AluJo SINE Alu 101 307 -5 1024 261 47 85 chr2 87822050 87822459 -165434124 + MER77 LTR ERV1 346 688 -7 947 278 82 65 chr2 87823695 87824460 -165432123 + L1MB5 LINE L1 18 795 -5747 512 219 19 9 chr2 87824498 87824712 -165431871 + CT-rich Low_complexity Low_complexity 1 216 0 3066 256 43 25 chr2 87824724 87825999 -165430584 + L1MB5 LINE L1 830 2080 -4564 2049 124 56 31 chr2 87825999 87826354 -165430229 - THE1B LTR MaLR 0 364 1 11286 109 5 3 chr2 87826354 87827931 -165428652 - THE1B-int LTR MaLR 0 1580 1 1827 133 162 6 chr2 87827931 87828246 -165428337 - THE1B LTR MaLR 0 364 1 3066 256 43 25 chr2 87828246 87829699 -165426884 + L1MB5 LINE L1 2079 3740 -2904 2815 196 25 35 chr2 87829703 87830822 -165425761 + L1MB5 LINE L1 5351 6461 -211 * 4113 166 63 36 chr2 87830821 87832165 -165424418 + L1MA8 LINE L1 4742 6138 -153 1918 167 9 9 chr2 87832165 87832506 -165424077 - MER2 DNA MER2_type -1 343 3 4113 166 63 36 chr2 87832506 87832662 -165423921 + L1MA8 LINE L1 6138 6288 -3 321 26 0 0 chr2 87832839 87832877 -165423706 + (A)n Simple_repeat Simple_repeat 1 38 0 2039 173 116 16 chr2 87833831 87834182 -165422401 + L1MA8 LINE L1 5730 6149 -142 1918 167 9 9 chr2 87834182 87834523 -165422060 - MER2 DNA MER2_type -1 343 3 2039 173 116 16 chr2 87834523 87834679 -165421904 + L1MA8 LINE L1 6149 6288 -3 378 0 0 0 chr2 87834856 87834898 -165421685 + (A)n Simple_repeat Simple_repeat 1 42 0 224 403 35 28 chr2 87835223 87835367 -165421216 + MIR SINE MIR 10 154 -108 259 351 21 11 chr2 87836065 87836159 -165420424 - MIR SINE MIR -91 117 23 23 33 0 0 chr2 87836211 87836241 -165420342 + AT_rich Low_complexity Low_complexity 1 30 0 349 222 33 0 chr2 87836255 87836345 -165420238 + L1MC1 LINE L1 5812 5904 -429 589 177 30 116 chr2 87836438 87836734 -165419849 - LTR8 LTR ERV1 -476 251 1 1437 153 69 0 chr2 87836734 87837094 -165419489 + L1MC1 LINE L1 5894 6313 -20 248 242 15 0 chr2 87837365 87837431 -165419152 - MLT1L LTR MaLR -389 226 160 200 303 46 46 chr2 87838123 87838232 -165418351 - MER5B DNA MER1_type 0 178 70 198 376 16 24 chr2 87839123 87839248 -165417335 + MIR SINE MIR 20 143 -119 58 38 0 0 chr2 87839964 87840043 -165416540 + AT_rich Low_complexity Low_complexity 1 79 0 5088 70 3 0 chr2 87840057 87840745 -165415838 - L1P LINE L1 -5453 693 4 241 253 24 0 chr2 87840780 87840863 -165415720 - L1MDa LINE L1 -3942 2598 2514 36526 38 1 9 chr2 87840912 87846051 -165410532 + L1P2 LINE L1 663 5757 -397 696 281 134 9 chr2 87846997 87847214 -165409369 + MIR SINE MIR 5 248 -14 197 356 27 0 chr2 87851693 87851766 -165404817 - MIR3 SINE MIR -2 206 132 397 269 104 28 chr2 87851793 87852005 -165404578 + Charlie8 DNA MER1_type 24 251 -2166 266 309 55 24 chr2 87852161 87852326 -165404257 - MLT1I LTR MaLR -173 236 67 1924 184 36 67 chr2 87852960 87853486 -165403097 - LTR53 LTR ERVL 0 519 10 775 276 125 22 chr2 87853855 87854127 -165402456 - LTR16A LTR ERVL -53 404 105 246 327 73 36 chr2 87854218 87854328 -165402255 - MIR3 SINE MIR -94 114 1 271 267 22 0 chr2 87854632 87854722 -165401861 - L1MC4 LINE L1 -1337 6705 6614 231 202 36 0 chr2 87854722 87854806 -165401777 + (TA)n Simple_repeat Simple_repeat 2 88 0 364 227 9 9 chr2 87854983 87855093 -165401490 + (TA)n Simple_repeat Simple_repeat 2 111 0 184 211 53 18 chr2 87858291 87858348 -165398235 - MIR SINE MIR -116 146 88 256 302 9 38 chr2 87859649 87859755 -165396828 + L2 LINE L2 1929 2031 -1283 1195 284 21 6 chr2 87859874 87860205 -165396378 + LTR16C LTR ERVL 156 491 0 239 137 0 20 chr2 87860675 87860726 -165395857 + (GAA)n Simple_repeat Simple_repeat 1 50 0 2204 111 7 0 chr2 87861132 87861429 -165395154 - AluSg SINE Alu -11 299 1 344 331 48 0 chr2 87861499 87861623 -165394960 - MIR3 SINE MIR -48 160 31 218 279 66 0 chr2 87861734 87861795 -165394788 - MIR3 SINE MIR -21 187 123 3163 237 96 75 chr2 87861824 87862537 -165394046 + L1MCa LINE L1 3 700 -5864 2159 129 0 0 chr2 87862537 87862847 -165393736 + AluSx SINE Alu 1 310 -2 3163 237 96 75 chr2 87862847 87864580 -165392003 + L1MCa LINE L1 700 2395 -4169 1668 177 0 39 chr2 87864580 87864891 -165391692 + AluJb SINE Alu 1 299 -13 3163 237 96 75 chr2 87864891 87865003 -165391580 + L1MCa LINE L1 2395 2503 -4061 2043 123 3 3 chr2 87865003 87865320 -165391263 - AluSx SINE Alu 0 317 1 3163 237 96 75 chr2 87865320 87865433 -165391150 + L1MCa LINE L1 2503 2878 -3686 1833 229 31 10 chr2 87865443 87866027 -165390556 + L1MCa LINE L1 2987 3582 -2982 747 246 112 22 chr2 87866048 87866325 -165390258 + MLT1C LTR MaLR 166 467 0 294 29 0 0 chr2 87869350 87869385 -165387198 + (CA)n Simple_repeat Simple_repeat 2 36 0 294 29 0 0 chr2 87870938 87870973 -165385610 + (CA)n Simple_repeat Simple_repeat 2 36 0 5261 125 32 7 chr2 87872982 87873887 -165382696 - L1PA15 LINE L1 -1 6164 5238 999 316 22 3 chr2 87873908 87874269 -165382314 + L1PA12 LINE L1 1214 1581 -6000 24 67 0 0 chr2 87875130 87875175 -165381408 + AT_rich Low_complexity Low_complexity 1 45 0 351 284 18 39 chr2 87875341 87875601 -165380982 - L1ME3A LINE L1 -314 5856 5701 27 49 0 0 chr2 87875610 87875651 -165380932 + AT_rich Low_complexity Low_complexity 1 41 0 589 294 37 28 chr2 87877671 87877889 -165378694 - L2 LINE L2 -1 3312 3093 567 251 84 63 chr2 87878036 87878275 -165378308 + L2 LINE L2 208 451 -2863 264 182 15 61 chr2 87878250 87878316 -165378267 + L2 LINE L2 3207 3269 -3 * 718 154 43 49 chr2 87878992 87879154 -165377429 - MER58B DNA MER1_type 0 341 181 721 271 5 48 chr2 87879155 87879365 -165377218 + MIR SINE MIR 29 229 -33 361 309 174 31 chr2 87879818 87880174 -165376409 + L2 LINE L2 1969 2375 -939 247 159 23 0 chr2 87880625 87880669 -165375914 - LTR16C LTR ERVL -2 489 445 27 0 0 0 chr2 87880675 87880702 -165375881 + AT_rich Low_complexity Low_complexity 1 27 0 399 73 0 0 chr2 87880751 87880806 -165375777 + (CA)n Simple_repeat Simple_repeat 2 56 0 446 197 110 69 chr2 87880836 87881054 -165375529 + LTR37A LTR ERV1 26 252 -174 466 201 90 8 chr2 87881120 87881254 -165375329 + MER53 DNA DNA 1 145 -44 258 213 102 16 chr2 87881262 87881389 -165375194 + LTR37A LTR ERV1 289 426 0 401 276 83 39 chr2 87881408 87881589 -165374994 - LTR16C LTR ERVL -93 398 210 4225 192 28 24 chr2 87881834 87882494 -165374089 - MER54A LTR ERVL -2 899 233 1992 127 10 29 chr2 87882494 87882802 -165373781 + AluSq SINE Alu 1 302 -11 4225 192 28 24 chr2 87882802 87883020 -165373563 - MER54A LTR ERVL -668 233 17 427 319 29 33 chr2 87884640 87884881 -165371702 + MIR SINE MIR 20 259 -3 2219 118 3 0 chr2 87885404 87885701 -165370882 + AluSx SINE Alu 1 298 -14 6382 150 18 5 chr2 87886417 87887538 -165369045 + Tigger1 DNA MER2_type 1 1136 -1282 4729 133 50 1 chr2 87887568 87888393 -165368190 + Tigger1 DNA MER2_type 1424 2288 -130 766 128 0 0 chr2 87888389 87888514 -165368069 - Tigger1 DNA MER2_type -1904 514 390 * 611 195 8 0 chr2 87888550 87888668 -165367915 + Tigger1 DNA MER2_type 2300 2418 0 200 231 9 28 chr2 87889347 87889455 -165367128 + GA-rich Low_complexity Low_complexity 3 108 0 5015 148 109 65 chr2 87889457 87889681 -165366902 + Ricksha_b DNA DNA 1 214 -2640 1567 101 38 0 chr2 87889681 87889919 -165366664 + L1PA16 LINE L1 5911 6157 -9 5015 148 109 65 chr2 87889919 87890888 -165365695 + Ricksha_b DNA DNA 214 1247 -7 1053 94 12 6 chr2 87890895 87891015 -165365568 + (GAAA)n Simple_repeat Simple_repeat 1 291 0 1053 94 12 6 chr2 87891015 87891185 -165365398 + (GAAA)n Simple_repeat Simple_repeat 1 171 0 360 0 0 0 chr2 87891635 87891675 -165364908 + (TG)n Simple_repeat Simple_repeat 1 40 0 22 0 0 0 chr2 87891742 87891764 -165364819 + AT_rich Low_complexity Low_complexity 1 22 0 1914 156 0 16 chr2 87894040 87894348 -165362235 + AluJb SINE Alu 9 311 -1 880 281 30 7 chr2 87894815 87895110 -165361473 - MLT1I LTR MaLR -14 395 94 183 258 48 0 chr2 87896583 87896645 -165359938 - MIR3 SINE MIR -39 169 105 785 274 121 49 chr2 87897380 87897811 -165358772 + MLT1J LTR MaLR 48 509 -2 5983 182 8 31 chr2 87898280 87899430 -165357153 - L1M1 LINE L1 -6421 1144 22 918 196 36 4 chr2 87899430 87899655 -165356928 - Charlie4 DNA MER1_type -1689 272 41 318 346 114 34 chr2 87900246 87900570 -165356013 - L2 LINE L2 -349 2965 2616 943 208 145 4 chr2 87900592 87900833 -165355750 + MLT1D LTR MaLR 180 454 -51 266 275 0 109 chr2 87900850 87900988 -165355595 - L2 LINE L2 -690 2624 2502 853 305 220 18 chr2 87900994 87901993 -165354590 + L2 LINE L2 2104 3308 -5 569 337 71 3 chr2 87902003 87902297 -165354286 - L2 LINE L2 -811 2503 2190 290 363 33 33 chr2 87903443 87903655 -165352928 - MIR SINE MIR -50 212 1 557 198 10 83 chr2 87904687 87904879 -165351704 + MER58B DNA MER1_type 164 341 0 267 316 123 57 chr2 87905414 87905658 -165350925 - MIR SINE MIR -2 260 1 364 324 9 0 chr2 87906023 87906131 -165350452 - MIR3 SINE MIR -34 174 66 186 254 17 34 chr2 87906168 87906227 -165350356 + MIR SINE MIR 6 63 -199 499 242 98 13 chr2 87906822 87906975 -165349608 - MIR SINE MIR -77 185 20 347 337 20 0 chr2 87907035 87907136 -165349447 - MIR SINE MIR -112 150 48 330 138 0 0 chr2 87908165 87908223 -165348360 + (A)n Simple_repeat Simple_repeat 1 58 0 585 297 142 9 chr2 87911543 87911755 -165344828 + MIR SINE MIR 5 244 -18 266 250 31 10 chr2 87911904 87912000 -165344583 + (TGGG)n Simple_repeat Simple_repeat 1 98 0 * 407 306 0 16 chr2 87911948 87912131 -165344452 + G-rich Low_complexity Low_complexity 1 180 0 1807 120 10 3 chr2 87912176 87912499 -165344084 + L1PA4 LINE L1 5838 6162 0 1110 286 75 36 chr2 87912530 87912567 -165344016 + L1M4 LINE L1 2234 2268 -3878 2404 87 0 0 chr2 87912567 87912876 -165343707 + AluY SINE Alu 1 309 -2 1110 286 75 36 chr2 87912876 87913837 -165342746 + L1M4 LINE L1 2268 3271 -2875 * 1757 198 26 60 chr2 87913833 87914302 -165342281 + L1MC2 LINE L1 5860 6319 -25 334 323 62 54 chr2 87914417 87914677 -165341906 + L1M4 LINE L1 3429 3690 -2456 * 338 297 77 31 chr2 87914659 87914881 -165341702 + L1M4 LINE L1 4235 4466 -1680 618 79 11 11 chr2 87915132 87915221 -165341362 + AluS SINE Alu 1 89 -224 230 356 0 19 chr2 87915392 87915496 -165341087 + AluSg/x SINE Alu 179 280 -20 1339 251 12 9 chr2 87915658 87916004 -165340579 - L1MB8 LINE L1 -63 6115 5769 5997 128 19 0 chr2 87916005 87917346 -165339237 - L1PA15 LINE L1 -1 6164 4815 25 0 0 0 chr2 87917528 87917553 -165339030 + AT_rich Low_complexity Low_complexity 1 25 0 56 76 0 0 chr2 87918063 87918182 -165338401 + AT_rich Low_complexity Low_complexity 1 119 0 355 212 36 66 chr2 87918719 87918856 -165337727 + MLT1J2 LTR MaLR 72 204 -246 375 259 103 46 chr2 87918858 87919032 -165337551 + MLT1J1 LTR MaLR 252 435 -11 23 33 0 0 chr2 87919144 87919174 -165337409 + AT_rich Low_complexity Low_complexity 1 30 0 284 282 14 0 chr2 87919219 87919290 -165337293 + L2 LINE L2 3231 3302 -11 252 290 19 28 chr2 87920151 87920258 -165336325 - L2 LINE L2 -802 2512 2407 417 315 27 49 chr2 87920260 87920444 -165336139 - MER5A DNA MER1_type -2 187 8 240 291 182 30 chr2 87922439 87922604 -165333979 - MIR SINE MIR -36 226 37 935 79 0 31 chr2 87922949 87923076 -165333507 + AluJb SINE Alu 1 123 -189 261 331 135 0 chr2 87924344 87924492 -165332091 - MIR SINE MIR -11 251 84 2397 82 7 0 chr2 87924889 87925192 -165331391 + AluSp SINE Alu 1 305 -8 1175 254 101 19 chr2 87925330 87925865 -165330718 + HAL1b LINE L1 770 1348 0 23 0 0 0 chr2 87925866 87925889 -165330694 + AT_rich Low_complexity Low_complexity 1 23 0 297 322 129 83 chr2 87925966 87926230 -165330353 - L2 LINE L2 -5 3267 2992 183 205 0 0 chr2 87926233 87926272 -165330311 + A-rich Low_complexity Low_complexity 1 39 0 1938 106 0 70 chr2 87926284 87926615 -165329968 + AluSg SINE Alu 1 308 -2 235 217 11 11 chr2 87927925 87928017 -165328566 + (TA)n Simple_repeat Simple_repeat 2 93 0 4939 73 163 1 chr2 87928467 87929178 -165327405 + LTR12 LTR ERV1 1 826 0 2149 98 0 21 chr2 87930185 87930538 -165326045 - AluY SINE Alu 0 349 3 302 254 40 56 chr2 87930640 87930766 -165325817 - MER5A DNA MER1_type -45 144 21 2233 80 10 3 chr2 87931133 87931422 -165325161 + AluY SINE Alu 9 299 -12 799 331 107 6 chr2 87931495 87931851 -165324732 - MLT1I LTR MaLR -9 400 9 482 272 106 23 chr2 87931892 87932109 -165324474 + MIR SINE MIR 18 252 -10 368 263 42 0 chr2 87933826 87933921 -165322662 - L1ME LINE L1 -460 5661 5563 222 37 0 0 chr2 87934078 87934105 -165322478 + (ATTG)n Simple_repeat Simple_repeat 2 28 0 1855 119 7 48 chr2 87934105 87934400 -165322183 - AluSx SINE Alu -27 285 3 27 87 0 0 chr2 87934408 87934477 -165322106 + AT_rich Low_complexity Low_complexity 1 69 0 1984 131 7 3 chr2 87935166 87935464 -165321119 + AluSx SINE Alu 1 299 -13 1161 106 12 6 chr2 87935466 87935736 -165320847 + AluSp SINE Alu 128 398 0 235 330 36 27 chr2 87936169 87936281 -165320302 - MER5B DNA MER1_type -63 115 3 201 143 0 0 chr2 87937227 87937262 -165319321 + (TG)n Simple_repeat Simple_repeat 2 36 0 21 0 0 0 chr2 87939237 87939258 -165317325 + AT_rich Low_complexity Low_complexity 1 21 0 736 189 0 0 chr2 87939260 87939387 -165317196 + MER20 DNA MER1_type 89 215 -4 1078 320 99 35 chr2 87939446 87940280 -165316303 - L2 LINE L2 -608 2706 1819 588 169 20 74 chr2 87940280 87940428 -165316155 + MER92B LTR ERV1 1 140 -496 550 205 9 0 chr2 87940428 87940540 -165316043 - L1MA6 LINE L1 -992 5154 5042 3861 141 49 7 chr2 87940540 87941332 -165315251 + L1MA6 LINE L1 5159 5989 -311 30 45 0 0 chr2 87941349 87941393 -165315190 + AT_rich Low_complexity Low_complexity 1 44 0 265 214 128 8 chr2 87941414 87941531 -165315052 + L1MC5 LINE L1 7533 7663 -298 603 162 0 10 chr2 87941661 87941748 -165314835 - Tigger7 DNA MER2_type 0 2487 2400 1040 198 111 9 chr2 87941748 87941965 -165314618 + MER8 DNA MER2_type 1 239 0 603 162 0 10 chr2 87941965 87941976 -165314607 - Tigger7 DNA MER2_type -87 2400 2390 1103 240 74 0 chr2 87941977 87942219 -165314364 - Tigger7 DNA MER2_type -466 267 8 228 193 70 0 chr2 87942235 87942292 -165314291 + L1MC5 LINE L1 7804 7864 -97 935 408 120 5 chr2 87942361 87942795 -165313788 + MER92B LTR ERV1 131 614 -22 180 0 0 0 chr2 87943472 87943492 -165313091 + (CA)n Simple_repeat Simple_repeat 2 21 0 572 355 104 31 chr2 87943867 87944175 -165312408 - L2 LINE L2 -2 3311 3027 4379 150 70 45 chr2 87944175 87944489 -165312094 + MER49 LTR ERV1 1 306 -617 1631 94 0 9 chr2 87944489 87944702 -165311881 + AluSc SINE Alu 98 308 -1 4379 150 70 45 chr2 87944702 87945288 -165311295 + MER49 LTR ERV1 306 923 0 572 355 104 31 chr2 87945288 87945755 -165310828 - L2 LINE L2 -286 3027 2472 21 0 0 0 chr2 87946436 87946457 -165310126 + AT_rich Low_complexity Low_complexity 1 21 0 1233 194 123 6 chr2 87946506 87946831 -165309752 + MLT1A1 LTR MaLR 3 365 0 368 276 49 8 chr2 87946870 87946993 -165309590 - MIR SINE MIR -15 247 120 294 229 0 14 chr2 87947080 87947150 -165309433 + L1M4 LINE L1 4552 4620 -1526 219 239 28 28 chr2 87947848 87947919 -165308664 + GA-rich Low_complexity Low_complexity 3 73 0 307 337 86 18 chr2 87948572 87948746 -165307837 + MIR3 SINE MIR 14 193 -61 766 247 0 11 chr2 87949675 87949853 -165306730 + MER5B DNA MER1_type 2 177 -1 1120 236 30 4 chr2 87949861 87950124 -165306459 - MLT1A1-int LTR MaLR -1465 270 1 977 174 64 138 chr2 87950124 87950515 -165306068 - MLT1A1 LTR MaLR 0 365 4 278 211 133 0 chr2 87950548 87950638 -165305945 + LTR33 LTR ERVL 414 515 -6 244 353 135 0 chr2 87951734 87951867 -165304716 - L2 LINE L2 0 3272 3122 257 269 156 38 chr2 87951928 87952088 -165304495 - LTR33 LTR ERVL -45 476 298 362 205 26 0 chr2 87952147 87952225 -165304358 - MLT1C LTR MaLR -317 150 71 201 74 0 0 chr2 87953371 87953398 -165303185 + (CAT)n Simple_repeat Simple_repeat 1 27 0 328 292 117 7 chr2 87953540 87953677 -165302906 + L2 LINE L2 3158 3309 -4 183 156 0 0 chr2 87953980 87954012 -165302571 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 201 319 32 76 chr2 87954593 87954750 -165301833 + MIR SINE MIR 71 220 -42 6975 206 40 35 chr2 87954772 87955407 -165301176 - L1MB8 LINE L1 0 6178 5548 2466 134 56 10 chr2 87955407 87955816 -165300767 + MSTA LTR MaLR 1 428 0 6975 206 40 35 chr2 87955816 87956496 -165300087 - L1MB8 LINE L1 -630 5548 4873 2038 190 34 11 chr2 87956496 87956932 -165299651 + L1MB1 LINE L1 5718 6163 -5 6975 206 40 35 chr2 87956932 87958300 -165298283 - L1MB8 LINE L1 -1305 4873 3494 22 35 0 0 chr2 87958533 87958562 -165298021 + AT_rich Low_complexity Low_complexity 1 29 0 1219 324 85 13 chr2 87958583 87959312 -165297271 - L2 LINE L2 -5 3308 2522 387 298 26 46 chr2 87960100 87960251 -165296332 - MIR3 SINE MIR -31 177 30 657 257 51 0 chr2 87960543 87960718 -165295865 + Charlie8 DNA MER1_type 24 207 -2210 514 289 39 116 chr2 87962543 87962924 -165293659 - L2 LINE L2 -8 3264 2913 277 322 126 47 chr2 87963024 87963428 -165293155 + L2 LINE L2 2330 2765 -549 21 0 0 0 chr2 87963529 87963550 -165293033 + AT_rich Low_complexity Low_complexity 1 21 0 332 330 160 52 chr2 87963567 87963873 -165292710 + L2 LINE L2 2934 3272 0 351 305 80 13 chr2 87964797 87964948 -165291635 + MIR SINE MIR 52 212 -50 1227 189 77 6 chr2 87965034 87965346 -165291237 + L1MA10 LINE L1 6001 6334 0 282 291 0 94 chr2 87966806 87966923 -165289660 - MIR3 SINE MIR -3 205 100 1231 182 84 94 chr2 87967002 87967299 -165289284 + AluJo SINE Alu 2 295 -7 197 426 7 7 chr2 87967411 87967547 -165289036 + L2 LINE L2 2918 3053 -219 313 308 104 29 chr2 87968131 87968290 -165288293 - MIR SINE MIR 0 262 116 2238 134 50 36 chr2 87968290 87968649 -165287934 + THE1B LTR MaLR 1 364 0 12740 95 0 1 chr2 87968649 87970229 -165286354 + THE1B-int LTR MaLR 1 1579 -1 2312 125 54 17 chr2 87970230 87970581 -165286002 + THE1B LTR MaLR 1 364 0 313 308 104 29 chr2 87970581 87970658 -165285925 - MIR SINE MIR -145 117 5 301 287 43 11 chr2 87970685 87970779 -165285804 + L2 LINE L2 3213 3309 -4 36 91 0 0 chr2 87971489 87971588 -165284995 + AT_rich Low_complexity Low_complexity 1 99 0 819 283 92 46 chr2 87971923 87972336 -165284247 - MLT1J2 LTR MaLR -18 432 1 1769 146 24 0 chr2 87972443 87972697 -165283886 + AluSx SINE Alu 1 260 -52 1570 216 73 22 chr2 87973547 87973918 -165282665 - MLT1B LTR MaLR 0 390 1 334 233 41 0 chr2 87974123 87974196 -165282387 - MIR SINE MIR -112 150 75 386 286 102 78 chr2 87974733 87974978 -165281605 + MIR SINE MIR 2 252 -10 289 227 103 10 chr2 87974987 87975084 -165281499 + MIR SINE MIR 74 179 -83 21 95 0 0 chr2 87975098 87975161 -165281422 + AT_rich Low_complexity Low_complexity 1 63 0 789 233 17 33 chr2 87975308 87975444 -165281139 + MER97c DNA MER1_type? 3 137 -953 2497 104 55 6 chr2 87975444 87975791 -165280792 - THE1B LTR MaLR 0 364 1 789 233 17 33 chr2 87975791 87975834 -165280749 + MER97c DNA MER1_type? 137 179 -911 527 274 23 40 chr2 87976134 87976309 -165280274 + MER5B DNA MER1_type 1 172 -6 615 265 26 0 chr2 87976376 87976527 -165280056 + MIR SINE MIR 107 261 -1 217 303 98 25 chr2 87976539 87976661 -165279922 - MIR SINE MIR -78 184 54 571 111 0 0 chr2 87977070 87977151 -165279432 + L1P LINE L1 5187 5267 -879 424 215 21 0 chr2 87977580 87977673 -165278910 + MIR SINE MIR 102 196 -66 471 234 99 58 chr2 87979161 87979332 -165277251 + MER5B DNA MER1_type 1 178 0 2240 224 43 27 chr2 87982238 87982860 -165273723 + MLT1E2 LTR MaLR 2 626 0 520 311 84 4 chr2 87984055 87984280 -165272303 + MIR SINE MIR 17 259 -3 637 339 146 30 chr2 87984435 87984780 -165271803 + L3 LINE CR1 677 1083 -494 1157 235 128 7 chr2 87984780 87985086 -165271497 + MER2 DNA MER2_type 2 344 0 637 339 146 30 chr2 87985086 87985171 -165271412 + L3 LINE CR1 1083 1157 -420 26 30 0 0 chr2 87985321 87985354 -165271229 + AT_rich Low_complexity Low_complexity 1 33 0 2678 119 19 3 chr2 87985686 87986055 -165270528 - THE1C LTR MaLR 0 375 1 246 126 0 5 chr2 87987484 87987531 -165269052 - MIR SINE MIR -65 143 99 272 261 22 22 chr2 87988257 87988349 -165268234 + L1ME LINE L1 5478 5569 -552 2309 113 0 0 chr2 87988929 87989238 -165267345 + AluSx SINE Alu 1 309 -3 217 196 0 0 chr2 87989571 87989617 -165266966 - MIR SINE MIR -113 149 104 410 177 0 25 chr2 87990021 87990100 -165266483 - LTR33 LTR ERVL -9 512 436 225 0 0 0 chr2 87990126 87990151 -165266432 + (T)n Simple_repeat Simple_repeat 1 25 0 256 241 0 0 chr2 87990159 87990213 -165266370 - LTR33 LTR ERVL -153 368 315 583 267 18 45 chr2 87990264 87990485 -165266098 - LTR33 LTR ERVL -306 215 1 184 273 0 36 chr2 87991124 87991179 -165265404 + L2 LINE L2 3246 3298 -15 218 184 0 0 chr2 87992008 87992046 -165264537 + MIR SINE MIR 79 116 -92 1327 180 73 28 chr2 87992102 87992419 -165264164 - L1MC2 LINE L1 -9 6335 6005 288 316 84 7 chr2 87992561 87992716 -165263867 - MIR SINE MIR -3 259 93 189 382 160 5 chr2 87992897 87993109 -165263474 - L2 LINE L2 -448 2866 2622 207 292 15 0 chr2 87993123 87993188 -165263395 - MIR SINE MIR -11 251 186 910 326 86 48 chr2 87993208 87993541 -165263042 - L2 LINE L2 -704 2610 2291 345 24 0 0 chr2 87993541 87993583 -165263000 + (CA)n Simple_repeat Simple_repeat 2 43 0 910 326 86 48 chr2 87993583 87994262 -165262321 - L2 LINE L2 -1023 2291 1560 2163 216 2 22 chr2 87994719 87995136 -165261447 + MER70A LTR ERVL 64 472 0 255 250 78 0 chr2 87995247 87995311 -165261272 + L3 LINE CR1 1492 1560 -17 253 290 110 0 chr2 87996160 87996260 -165260323 + L2 LINE L2 3203 3313 0 241 395 0 16 chr2 87996311 87996435 -165260148 - MIR SINE MIR -120 142 21 433 124 59 0 chr2 87997781 87998118 -165258465 + (TA)n Simple_repeat Simple_repeat 1 356 0 1937 245 84 25 chr2 87998249 87998809 -165257774 - MLT1E LTR MaLR 0 593 1 5524 115 4 5 chr2 87999317 88000124 -165256459 - L1PA15 LINE L1 -7 6158 5353 213 39 0 0 chr2 88000618 88000644 -165255939 + (TC)n Simple_repeat Simple_repeat 1 26 0 1806 211 19 8 chr2 88001676 88002037 -165254546 - MLT1A1 LTR MaLR 0 365 1 270 156 22 0 chr2 88002211 88002256 -165254327 + L2 LINE L2 3223 3268 -4 373 316 108 13 chr2 88004125 88004283 -165252300 + MIR SINE MIR 84 256 -6 428 281 54 38 chr2 88007196 88007381 -165249202 - MER20B DNA MER1_type -595 188 1 1526 143 0 30 chr2 88007607 88007658 -165248925 - AluSx SINE Alu -82 230 179 2248 107 0 3 chr2 88007658 88007957 -165248626 - AluSx SINE Alu -14 298 1 1526 143 0 30 chr2 88007957 88008142 -165248441 - AluSx SINE Alu -133 179 1 801 295 14 9 chr2 88008413 88008782 -165247801 + MLT1I LTR MaLR 8 409 0 353 102 17 0 chr2 88008872 88008931 -165247652 + (CA)n Simple_repeat Simple_repeat 1 60 0 2145 151 54 35 chr2 88008980 88009520 -165247063 + MLT2A2 LTR ERVL 1 554 0 1813 115 65 4 chr2 88009578 88009838 -165246745 - AluSx SINE Alu -36 276 1 197 311 155 19 chr2 88009911 88010014 -165246569 + L2 LINE L2 3154 3270 -2 530 200 152 0 chr2 88010237 88010362 -165246221 + MIR SINE MIR 99 242 -20 213 321 129 21 chr2 88010460 88010600 -165245983 - MIR SINE MIR -90 172 18 303 217 17 0 chr2 88010629 88010689 -165245894 - L2 LINE L2 -6 3307 3247 409 266 88 31 chr2 88011910 88012102 -165244481 - L2 LINE L2 -1537 1777 1575 324 313 50 88 chr2 88012717 88012979 -165243604 - L2 LINE L2 -36 3236 2985 320 167 320 13 chr2 88013968 88014118 -165242465 - LTR33 LTR ERVL -14 507 312 1034 174 97 0 chr2 88014866 88015062 -165241521 + AluJo SINE Alu 1 215 -97 228 331 182 0 chr2 88015980 88016101 -165240482 + MIR SINE MIR 64 206 -56 1900 159 8 19 chr2 88016368 88016732 -165239851 - MER47A DNA MER2_type -5 361 2 279 360 0 0 chr2 88017103 88017228 -165239355 + MER117 DNA MER1_type 1 125 -72 190 300 0 0 chr2 88017569 88017609 -165238974 - L2 LINE L2 -92 3180 3141 387 176 13 115 chr2 88018889 88019011 -165237572 - L1MEc LINE L1 -3430 3527 3416 1039 183 31 125 chr2 88019011 88019394 -165237189 - MLT1A1 LTR MaLR 0 365 19 2423 88 0 0 chr2 88019431 88019725 -165236858 - AluSx SINE Alu -18 294 1 822 258 61 17 chr2 88019786 88020473 -165236110 - L1MEc LINE L1 -3770 3199 2517 2593 86 131 2 chr2 88020520 88020917 -165235666 - LTR7 LTR ERV1 -2 448 1 2755 238 83 47 chr2 88020972 88021460 -165235123 - L1M4c LINE L1 -4451 2687 2218 1538 186 16 46 chr2 88021460 88021766 -165234817 - AluJo SINE Alu -11 301 5 2755 238 83 47 chr2 88021766 88023181 -165233402 - L1M4c LINE L1 -4920 2218 492 25 65 0 0 chr2 88023371 88023417 -165233166 + AT_rich Low_complexity Low_complexity 1 46 0 297 0 0 0 chr2 88023697 88023730 -165232853 + (CA)n Simple_repeat Simple_repeat 2 34 0 23 0 0 0 chr2 88024227 88024250 -165232333 + AT_rich Low_complexity Low_complexity 1 23 0 41908 41 1 4 chr2 88024319 88030491 -165226092 + L1PA3 LINE L1 1 6155 0 26 0 0 0 chr2 88030491 88030517 -165226066 + AT_rich Low_complexity Low_complexity 1 26 0 333 221 21 42 chr2 88031806 88031901 -165224682 - L1MC4 LINE L1 -1339 6703 6611 214 171 29 0 chr2 88031905 88031975 -165224608 + (TA)n Simple_repeat Simple_repeat 2 73 0 269 342 84 32 chr2 88032795 88032950 -165223633 - MER5A DNA MER1_type -6 183 21 2344 108 0 0 chr2 88034146 88034452 -165222131 - AluSx SINE Alu -6 306 1 355 318 45 30 chr2 88037021 88037222 -165219361 - MIR SINE MIR -52 210 7 937 266 50 80 chr2 88037483 88037999 -165218584 + MLT1J LTR MaLR 8 508 -3 482 261 120 62 chr2 88039436 88039793 -165216790 - MLT1J2 LTR MaLR 0 450 73 2413 80 3 0 chr2 88040438 88040739 -165215844 - AluSq SINE Alu -11 302 1 211 220 51 161 chr2 88041141 88041259 -165215324 + L3 LINE CR1 786 890 -687 263 355 123 18 chr2 88041305 88041533 -165215050 + L3 LINE CR1 1015 1266 -311 447 293 43 18 chr2 88041577 88041741 -165214842 + L3 LINE CR1 1409 1576 -1 2084 137 3 13 chr2 88041842 88042155 -165214428 + AluSx SINE Alu 1 310 -2 184 231 0 0 chr2 88043880 88043919 -165212664 - MIR SINE MIR -175 87 49 368 302 116 0 chr2 88044794 88044923 -165211660 - MIR SINE MIR -10 252 109 730 98 24 8 chr2 88045330 88045453 -165211130 + L1PA5 LINE L1 6029 6153 -1 1235 207 79 12 chr2 88045570 88045937 -165210646 - MLT2B2 LTR ERVL 0 520 94 502 126 46 0 chr2 88046118 88046205 -165210378 - MLT2B2 LTR ERVL -424 91 1 538 145 0 0 chr2 88047779 88047887 -165208696 - AluY SINE Alu 0 315 208 2233 104 0 0 chr2 88047888 88048168 -165208415 - AluSx SINE Alu -32 280 1 1053 168 51 104 chr2 88049477 88050095 -165206488 + MER4C LTR ERV1 1 465 0 361 242 113 24 chr2 88050780 88050904 -165205679 + MER5A DNA MER1_type 7 141 -48 183 227 45 0 chr2 88051173 88051217 -165205366 + L2 LINE L2 3251 3296 -17 784 101 17 45 chr2 88051269 88051448 -165205135 + (GAAA)n Simple_repeat Simple_repeat 1 174 0 526 266 11 0 chr2 88051415 88051592 -165204991 + GA-rich Low_complexity Low_complexity 1 179 0 * 614 269 116 21 chr2 88052336 88052863 -165203720 - L1ME4a LINE L1 -35 6086 5510 192 40 0 0 chr2 88052997 88053022 -165203561 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 1174 227 8 4 chr2 88053064 88053324 -165203259 + MLT1A1 LTR MaLR 105 365 0 6569 178 35 7 chr2 88053961 88056090 -165200493 - L1PA15 LINE L1 -5 6160 3985 1200 167 80 4 chr2 88056258 88056522 -165200061 - L1MA4 LINE L1 -39 6261 5978 395 169 0 28 chr2 88057228 88057299 -165199284 + L2 LINE L2 3204 3272 0 21 36 0 0 chr2 88058340 88058368 -165198215 + AT_rich Low_complexity Low_complexity 1 28 0 258 268 14 0 chr2 88058374 88058445 -165198138 - MIR SINE MIR -14 248 177 214 278 45 98 chr2 88060642 88060775 -165195808 - MIR SINE MIR -109 153 28 1867 48 9 4 chr2 88060833 88061063 -165195520 + AluY SINE Alu 63 293 -18 3955 127 10 14 chr2 88061174 88061951 -165194632 + L1MA5A LINE L1 5096 5868 -429 43021 58 3 0 chr2 88061960 88068103 -165188480 + L1PA5 LINE L1 11 6172 0 2867 98 50 0 chr2 88068140 88068560 -165188023 + L1MA5A LINE L1 5854 6294 -3 53 40 0 0 chr2 88068600 88068674 -165187909 + AT_rich Low_complexity Low_complexity 1 74 0 876 139 139 101 chr2 88068678 88068887 -165187696 + MER20 DNA MER1_type 2 218 -1 449 267 89 0 chr2 88069321 88069467 -165187116 - MIR SINE MIR -48 214 56 774 274 27 57 chr2 88071745 88071954 -165184629 + MIR SINE MIR 8 209 -53 1865 174 0 0 chr2 88071954 88072253 -165184330 + AluJb SINE Alu 1 299 -13 774 274 27 57 chr2 88072253 88072306 -165184277 + MIR SINE MIR 209 262 0 192 256 0 0 chr2 88072322 88072365 -165184218 + L2 LINE L2 3230 3272 0 237 288 27 54 chr2 88073493 88073604 -165182979 - L3 LINE CR1 -818 759 652 215 371 137 23 chr2 88075549 88075805 -165180778 - L3 LINE CR1 -351 1226 942 279 0 0 0 chr2 88075907 88075938 -165180645 + (TG)n Simple_repeat Simple_repeat 2 32 0 306 0 0 0 chr2 88076002 88076036 -165180547 + (A)n Simple_repeat Simple_repeat 1 34 0 306 307 130 30 chr2 88076199 88076499 -165180084 - L3 LINE CR1 -853 724 395 268 324 0 0 chr2 88076499 88076570 -165180013 - MIR3 SINE MIR -25 183 113 2484 156 115 65 chr2 88079794 88080289 -165176294 - MLT2B1 LTR ERVL 0 520 1 414 296 116 11 chr2 88081086 88081275 -165175308 - MIR SINE MIR -7 255 47 195 256 0 0 chr2 88081434 88081477 -165175106 - L2 LINE L2 -6 3266 3224 223 325 126 30 chr2 88081574 88081876 -165174707 - L2 LINE L2 -131 3141 2811 2531 63 0 0 chr2 88082116 88082416 -165174167 + AluY SINE Alu 1 300 -11 2075 105 0 4 chr2 88083625 88083902 -165172681 - AluSq SINE Alu -4 309 34 2199 163 31 82 chr2 88084095 88084544 -165172039 + MSTB LTR MaLR 1 426 0 648 269 45 22 chr2 88084870 88085093 -165171490 + MLT1H LTR MaLR 115 342 -207 452 235 92 0 chr2 88085119 88085238 -165171345 + MLT1H LTR MaLR 420 549 0 437 341 162 33 chr2 88085545 88085919 -165170664 - L2 LINE L2 -551 2763 2318 3639 205 6 12 chr2 88085919 88086572 -165170011 + MER82 DNA MER2_type 2 650 -3 437 341 162 33 chr2 88086572 88086655 -165169928 - L2 LINE L2 -996 2318 2247 * 945 296 101 43 chr2 88086641 88087244 -165169339 + L2 LINE L2 2703 3313 0 2180 125 3 0 chr2 88087504 88087816 -165168767 + AluSq SINE Alu 1 313 0 245 273 61 0 chr2 88087858 88087924 -165168659 - L2 LINE L2 0 3272 3203 554 281 48 48 chr2 88088099 88088394 -165168189 + LTR16A1 LTR ERVL 147 441 -16 494 349 125 12 chr2 88088478 88088956 -165167627 - L2 LINE L2 -177 3095 2564 237 320 8 49 chr2 88092292 88092414 -165164169 + MIR SINE MIR 31 147 -61 948 278 71 3 chr2 88092551 88092846 -165163737 - LTR16C LTR ERVL 0 491 177 210 71 0 0 chr2 88092878 88092906 -165163677 + (A)n Simple_repeat Simple_repeat 1 28 0 460 295 26 32 chr2 88093919 88094109 -165162474 + HsTC2c DNA Tc2 1 189 -540 1031 244 21 4 chr2 88094240 88094482 -165162101 + HsTC2c DNA Tc2 234 479 -250 1410 72 6 0 chr2 88094520 88094701 -165161882 + AluY SINE Alu 115 296 -15 239 280 271 0 chr2 88094712 88094819 -165161764 + HsTC2c DNA Tc2 588 723 -6 815 259 95 9 chr2 88094975 88095207 -165161376 + MIR SINE MIR 1 252 -10 229 271 200 0 chr2 88095564 88095634 -165160949 + MER117 DNA MER1_type 1 84 -113 241 333 13 0 chr2 88096086 88096161 -165160422 - MIR3 SINE MIR -21 187 112 811 219 18 0 chr2 88096735 88096904 -165159679 - FRAM SINE Alu -4 172 1 1043 275 95 30 chr2 88097064 88097902 -165158681 - L1ME3A LINE L1 -299 5871 4980 554 239 139 25 chr2 88097959 88098160 -165158423 + MIR SINE MIR 23 246 -16 204 253 147 11 chr2 88098637 88098732 -165157851 - MIR SINE MIR -6 256 149 185 268 49 49 chr2 88099449 88099531 -165157052 + L2 LINE L2 3232 3313 0 2164 173 21 11 chr2 88100753 88101134 -165155449 + MLT1B LTR MaLR 6 390 0 470 240 88 18 chr2 88101290 88101543 -165155040 - MLT1H LTR MaLR 0 549 267 2046 146 24 89 chr2 88102387 88102804 -165153779 - MLT1B LTR MaLR 0 390 1 6146 106 33 3 chr2 88103217 88104459 -165152124 + L1PA13 LINE L1 4897 6160 -3 1263 251 169 40 chr2 88104459 88104493 -165152090 - HAL1 LINE L1 -35 2472 2444 198 71 0 0 chr2 88104493 88104521 -165152062 + (TG)n Simple_repeat Simple_repeat 2 29 0 1263 251 169 40 chr2 88104521 88105238 -165151345 - HAL1 LINE L1 -63 2444 1624 20060 30 2 0 chr2 88105328 88108287 -165148296 - L1PA2 LINE L1 0 6155 3126 534 241 28 14 chr2 88108287 88108428 -165148155 - HAL1 LINE L1 -881 1626 1484 1099 262 99 12 chr2 88108431 88108755 -165147828 - HAL1 LINE L1 -1745 762 411 1736 198 116 5 chr2 88108834 88109248 -165147335 + L1M4 LINE L1 3999 4458 -1688 195 333 0 0 chr2 88110192 88110249 -165146334 - L2 LINE L2 -216 3056 3000 332 269 50 17 chr2 88110496 88110615 -165145968 - LTR67 LTR ERVL -5 552 430 565 184 10 10 chr2 88110807 88110910 -165145673 + MER21B LTR ERV1 552 654 -209 193 359 61 38 chr2 88111995 88112126 -165144457 + MIR SINE MIR 21 154 -108 344 214 10 102 chr2 88112127 88112225 -165144358 + MER21B LTR ERV1 1 89 -774 2234 227 48 35 chr2 88112382 88113043 -165143540 + MER21B LTR ERV1 143 812 -51 3149 117 67 33 chr2 88113043 88113309 -165143274 + LTR43 LTR ERV1 1 256 -346 5562 144 26 35 chr2 88113309 88114390 -165142193 - MER11C LTR ERVK 0 1071 1 3149 117 67 33 chr2 88114390 88114705 -165141878 + LTR43 LTR ERV1 256 602 0 257 311 100 0 chr2 88115541 88115631 -165140952 - MIR SINE MIR -90 118 20 1198 220 63 40 chr2 88115917 88116363 -165140220 + MLT1C LTR MaLR 6 461 -6 656 308 34 22 chr2 88116489 88116810 -165139773 - LTR16C LTR ERVL -99 392 68 607 263 69 11 chr2 88117603 88117778 -165138805 - MIR SINE MIR -10 252 68 188 254 118 55 chr2 88117784 88117894 -165138689 - L2 LINE L2 -20 3252 3136 533 222 14 69 chr2 88117994 88118138 -165138445 + MER5B DNA MER1_type 43 178 0 202 150 50 0 chr2 88118282 88118322 -165138261 + MER5B DNA MER1_type 136 177 -1 267 277 179 0 chr2 88118743 88118855 -165137728 - L2 LINE L2 -4 3309 3178 852 147 8 0 chr2 88118860 88118989 -165137594 + FLAM_C SINE Alu 4 133 0 290 198 148 0 chr2 88118989 88119070 -165137513 + LTR54 LTR ERV1 7 99 -411 523 210 190 31 chr2 88119093 88119288 -165137295 + MER57A LTR ERV1 115 340 -63 313 81 65 48 chr2 88121092 88121154 -165135429 - MER5A DNA MER1_type 0 189 127 663 176 29 29 chr2 88121155 88121291 -165135292 + AluJo SINE Alu 1 136 -176 243 61 0 0 chr2 88121293 88121326 -165135257 + (CA)n Simple_repeat Simple_repeat 2 34 0 562 217 16 8 chr2 88121326 88121379 -165135204 - MER5A DNA MER1_type -58 131 80 2054 157 0 6 chr2 88121379 88121691 -165134892 - AluSx SINE Alu -2 310 1 562 217 16 8 chr2 88121691 88121766 -165134817 - MER5A DNA MER1_type -109 80 2 565 293 80 36 chr2 88121785 88122034 -165134549 + MIR SINE MIR 1 260 -2 251 319 0 71 chr2 88123632 88123773 -165132810 - MIR SINE MIR -56 206 76 266 318 88 7 chr2 88124635 88124783 -165131800 + MIR3 SINE MIR 48 207 -1 2075 117 0 10 chr2 88125005 88125296 -165131287 - AluSg1 SINE Alu -21 288 1 2294 92 0 16 chr2 88125360 88125665 -165130918 - AluSq SINE Alu -13 300 1 798 151 0 0 chr2 88126225 88126364 -165130219 - L1MA7 LINE L1 -4 6287 6149 200 189 0 0 chr2 88126380 88126417 -165130166 + MIR SINE MIR 118 154 -108 1203 40 0 0 chr2 88126417 88126567 -165130016 - L1P1 LINE L1 -432 5723 5574 711 12 0 0 chr2 88126567 88126652 -165129931 + L1PA3 LINE L1 6070 6155 0 209 213 0 0 chr2 88126655 88126702 -165129881 + A-rich Low_complexity Low_complexity 1 47 0 1423 161 15 43 chr2 88127752 88127933 -165128650 - MER33 DNA MER1_type -2263 322 153 1784 147 7 18 chr2 88127933 88128218 -165128365 + AluJo SINE Alu 1 282 -30 1423 161 15 43 chr2 88128218 88128365 -165128218 - MER33 DNA MER1_type -2432 153 3 376 305 85 28 chr2 88128728 88128905 -165127678 + MIR SINE MIR 69 255 -7 505 335 0 0 chr2 88129572 88129730 -165126853 + MIR3 SINE MIR 45 202 -6 389 206 165 0 chr2 88130059 88130156 -165126427 + L2 LINE L2 3200 3312 -1 2109 276 118 55 chr2 88130323 88132303 -165124280 + HAL1 LINE L1 2 2107 -400 2557 69 0 0 chr2 88132340 88132644 -165123939 - AluY SINE Alu -7 304 1 425 337 56 6 chr2 88133807 88133985 -165122598 + MIR SINE MIR 20 206 -56 349 277 71 76 chr2 88134680 88134864 -165121719 + MIR3 SINE MIR 10 192 -16 182 374 77 0 chr2 88135454 88135545 -165121038 - L2 LINE L2 -171 3101 3004 832 139 28 7 chr2 88135801 88135945 -165120638 + L1M1 LINE L1 1703 1849 -5716 493 186 8 24 chr2 88137082 88137206 -165119377 + L1MA2 LINE L1 12 133 -7432 14727 145 26 51 chr2 88137260 88138053 -165118530 + L1MA2 LINE L1 1638 2449 -5274 276 146 0 0 chr2 88138053 88138101 -165118482 + MSTA LTR MaLR 5 52 -376 14727 145 26 51 chr2 88138101 88138125 -165118458 + L1MA2 LINE L1 2449 2472 -5251 527 175 10 0 chr2 88138125 88138222 -165118361 + THE1C LTR MaLR 278 375 0 14727 145 26 51 chr2 88138222 88141004 -165115579 + L1MA2 LINE L1 2472 5321 -2402 1336 90 0 16 chr2 88141004 88141186 -165115397 + L1PB1 LINE L1 5966 6151 0 14727 145 26 51 chr2 88141186 88142824 -165113759 + L1MA2 LINE L1 5321 6835 -888 2100 125 7 17 chr2 88142824 88143121 -165113462 + AluSq SINE Alu 1 294 -19 14727 145 26 51 chr2 88143121 88143983 -165112600 + L1MA2 LINE L1 6835 7717 -6 464 274 84 50 chr2 88144033 88144354 -165112229 + HAL1 LINE L1 43 374 -2133 349 333 139 0 chr2 88144974 88145139 -165111444 + MIR SINE MIR 10 197 -65 2061 32 4 0 chr2 88145688 88145982 -165110601 + L1PA4 LINE L1 5904 6198 0 612 183 135 8 chr2 88146218 88146344 -165110239 + MER5A DNA MER1_type 1 142 -47 3809 130 81 15 chr2 88146365 88147118 -165109465 - L1MA8 LINE L1 -12 6279 5477 2629 155 24 6 chr2 88147122 88147739 -165108844 + L1MA8 LINE L1 4848 5479 -743 945 102 54 0 chr2 88147739 88147899 -165108684 + L1MA7 LINE L1 6114 6288 -3 280 236 0 0 chr2 88147916 88147971 -165108612 + MER5A DNA MER1_type 134 188 -1 269 316 0 0 chr2 88148128 88148185 -165108398 + L2 LINE L2 3136 3192 -80 23912 143 13 17 chr2 88148185 88150814 -165105769 - L1PA8A LINE L1 -1 6445 3805 2608 86 20 3 chr2 88150814 88151163 -165105420 + THE1A LTR MaLR 1 355 0 23912 143 13 17 chr2 88151163 88154886 -165101697 - L1PA8A LINE L1 -2641 3805 1 491 259 93 8 chr2 88154908 88155226 -165101357 - MLT1I LTR MaLR 0 409 17 391 342 97 0 chr2 88155252 88155407 -165101176 - MIR SINE MIR -92 170 1 3001 93 5 0 chr2 88157283 88157703 -165098880 + L1PA13 LINE L1 5723 6144 -19 250 275 22 11 chr2 88158390 88158481 -165098102 - L1MC4 LINE L1 -1040 7002 6911 594 300 62 22 chr2 88158578 88158898 -165097685 + MER90 LTR ERV1 282 614 0 267 310 30 0 chr2 88159506 88159606 -165096977 + GA-rich Low_complexity Low_complexity 4 106 0 499 215 0 0 chr2 88159997 88160090 -165096493 + L1PA12 LINE L1 1 93 -7488 18391 102 14 13 chr2 88160105 88166428 -165090155 + L1PA7 LINE L1 1128 7589 -3 5769 237 63 7 chr2 88166430 88167913 -165088670 + L1PA12 LINE L1 80 1645 -5936 3810 247 24 10 chr2 88167985 88168250 -165088333 + L1PA12 LINE L1 2471 2731 -4853 1929 153 3 0 chr2 88168250 88168538 -165088045 + AluSx SINE Alu 1 289 -23 3810 247 24 10 chr2 88168538 88169697 -165086886 + L1PA12 LINE L1 2731 3899 -3685 * 4795 153 46 9 chr2 88169696 88171120 -165085463 + L1PB2 LINE L1 4675 6149 -2 10398 183 36 20 chr2 88171129 88172333 -165084250 + L1PA12 LINE L1 3882 5065 -2519 750 153 0 44 chr2 88172333 88172470 -165084113 + FLAM_C SINE Alu 1 131 -2 10398 183 36 20 chr2 88172470 88173696 -165082887 + L1PA12 LINE L1 5065 6351 -1233 259 237 211 0 chr2 88173966 88174042 -165082541 + MER5B DNA MER1_type 65 156 -22 1480 201 44 0 chr2 88174122 88174396 -165082187 + AluJo SINE Alu 1 286 -26 385 196 89 98 chr2 88174408 88174520 -165082063 + MER5B DNA MER1_type 68 178 0 24 32 0 0 chr2 88174822 88174853 -165081730 + AT_rich Low_complexity Low_complexity 1 31 0 2143 95 56 0 chr2 88175516 88175801 -165080782 - AluSc SINE Alu -8 301 1 200 370 0 12 chr2 88175856 88175937 -165080646 - MIR3 SINE MIR -119 89 10 1244 199 116 22 chr2 88176262 88176529 -165080054 + AluJo SINE Alu 5 296 -16 1535 178 63 21 chr2 88176531 88176647 -165079936 + AluJo SINE Alu 1 111 -201 180 0 0 0 chr2 88176647 88176667 -165079916 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 1535 178 63 21 chr2 88176667 88176836 -165079747 + AluJo SINE Alu 111 298 -14 21 36 0 0 chr2 88176887 88176915 -165079668 + AT_rich Low_complexity Low_complexity 1 28 0 2117 170 19 3 chr2 88177165 88177524 -165079059 - MLT1A1 LTR MaLR 0 365 1 5406 166 15 10 chr2 88177795 88179820 -165076763 + L1PA16 LINE L1 4122 6153 -13 23 68 0 0 chr2 88180033 88180077 -165076506 + AT_rich Low_complexity Low_complexity 1 44 0 413 250 136 9 chr2 88181107 88181335 -165075248 + L2 LINE L2 2299 2555 -759 3230 102 26 26 chr2 88181336 88181838 -165074745 - L1PA11 LINE L1 0 6174 5673 11646 127 19 14 chr2 88181858 88183862 -165072721 - L1PA11 LINE L1 -794 5352 3339 484 237 39 19 chr2 88185087 88185243 -165071340 + MIR SINE MIR 104 262 0 473 307 24 0 chr2 88185420 88185547 -165071036 - MIR SINE MIR -116 146 17 320 286 66 0 chr2 88185944 88186035 -165070548 - MLT1L LTR MaLR -518 97 1 503 157 0 0 chr2 88186523 88186612 -165069971 + MLT1C LTR MaLR 1 89 -378 773 166 58 10 chr2 88186775 88187034 -165069549 + L1ME1 LINE L1 5194 5462 -716 3893 184 32 25 chr2 88187034 88188390 -165068193 - MER52A LTR ERV1 0 1755 373 265 270 0 0 chr2 88188391 88188454 -165068129 - MER52A LTR ERV1 -1690 65 3 2032 213 74 24 chr2 88188455 88189009 -165067574 + L1ME1 LINE L1 5455 6036 -130 549 95 0 24 chr2 88189010 88189094 -165067489 + LTR35 LTR ERV1 1 82 -536 344 207 58 21 chr2 88189218 88189356 -165067227 + LTR43 LTR ERV1 198 493 -186 695 163 8 8 chr2 88189456 88189579 -165067004 + LTR35 LTR ERV1 488 610 -8 3869 175 59 43 chr2 88189650 88189748 -165066835 - MER21B LTR ERV1 0 863 768 186 43 0 0 chr2 88189748 88189771 -165066812 + (CAAG)n Simple_repeat Simple_repeat 1 23 0 3869 175 59 43 chr2 88189771 88189929 -165066654 - MER21B LTR ERV1 -95 768 614 2202 124 54 25 chr2 88189929 88190283 -165066300 + THE1B LTR MaLR 1 364 0 3869 175 59 43 chr2 88190283 88190875 -165065708 - MER21B LTR ERV1 -249 614 1 630 236 75 0 chr2 88192182 88192343 -165064240 + MER5B DNA MER1_type 2 174 -4 22 0 0 0 chr2 88193088 88193110 -165063473 + AT_rich Low_complexity Low_complexity 1 22 0 1851 174 0 16 chr2 88193473 88193778 -165062805 + AluJo SINE Alu 2 301 -11 573 288 19 74 chr2 88193786 88194043 -165062540 - MIR SINE MIR -12 250 8 823 204 31 42 chr2 88194120 88194311 -165062272 - MER5A DNA MER1_type 0 189 1 251 344 61 46 chr2 88194848 88194979 -165061604 - L2 LINE L2 -1 3271 3139 384 344 177 36 chr2 88195090 88195474 -165061109 - L2 LINE L2 -2 3270 2833 926 139 0 0 chr2 88196230 88196374 -165060209 + L1PA7 LINE L1 5 148 -6313 24408 84 10 1 chr2 88196375 88198915 -165057668 + L1PA7 LINE L1 2018 4615 -1854 2260 82 16 13 chr2 88198915 88199221 -165057362 + AluY SINE Alu 1 307 -4 24408 84 10 1 chr2 88199221 88201091 -165055492 + L1PA7 LINE L1 4615 6466 -3 418 342 136 0 chr2 88202072 88202227 -165054356 + L3 LINE CR1 1400 1575 -2 476 254 29 35 chr2 88202349 88202522 -165054061 + MER104 DNA Tc2 8 179 -1 1589 214 224 6 chr2 88203043 88203530 -165053053 + MLT1E LTR MaLR 1 593 0 355 249 24 115 chr2 88203586 88203751 -165052832 - L2 LINE L2 0 3313 3164 334 312 138 14 chr2 88204231 88204522 -165052061 + L3 LINE CR1 1153 1549 -28 380 235 224 0 chr2 88206082 88206180 -165050403 - MER5B DNA MER1_type -58 120 1 856 145 112 17 chr2 88206467 88206646 -165049937 + MER30 DNA MER1_type 2 197 -33 634 300 52 9 chr2 88206856 88207066 -165049517 - MIR SINE MIR -12 250 32 382 291 114 0 chr2 88207477 88207635 -165048948 - MER5B DNA MER1_type 0 178 3 362 343 62 7 chr2 88208029 88208175 -165048408 - L2 LINE L2 -1 3271 3118 1972 141 118 18 chr2 88208186 88208575 -165048008 - MSTA LTR MaLR 0 428 1 5047 166 40 75 chr2 88208807 88209252 -165047331 + L1 LINE L1 4046 4505 -1641 811 178 0 0 chr2 88209252 88209381 -165047202 + FLAM_C SINE Alu 2 130 -3 5047 166 40 75 chr2 88209381 88209625 -165046958 + L1 LINE L1 4505 4756 -1390 2165 146 0 0 chr2 88209625 88209926 -165046657 + AluJb SINE Alu 1 301 -11 5047 166 40 75 chr2 88209926 88210642 -165045941 + L1 LINE L1 4756 5403 -743 366 170 189 0 chr2 88210645 88210720 -165045863 + L1MA9 LINE L1 6072 6132 -180 275 49 24 0 chr2 88210720 88210761 -165045822 + (CA)n Simple_repeat Simple_repeat 1 42 0 366 170 189 0 chr2 88210761 88210791 -165045792 + L1MA9 LINE L1 6132 6197 -115 400 209 22 0 chr2 88210832 88210923 -165045660 - MER69 DNA AcHobo -2430 96 4 190 364 0 0 chr2 88211203 88211258 -165045325 - L2 LINE L2 -50 3222 3168 1160 91 0 23 chr2 88213219 88213395 -165043188 + L1PA11 LINE L1 6001 6172 -2 189 159 0 0 chr2 88213410 88213454 -165043129 + A-rich Low_complexity Low_complexity 10 53 0 701 249 159 30 chr2 88214009 88214343 -165042240 + LTR33 LTR ERVL 24 400 -121 811 243 73 50 chr2 88215014 88215331 -165041252 + MER21B LTR ERV1 415 738 -125 439 199 51 77 chr2 88216197 88216412 -165040171 + L1ME2 LINE L1 2 214 -5856 1387 236 48 32 chr2 88216461 88216961 -165039622 + L1ME2 LINE L1 3377 3884 -2196 635 199 76 0 chr2 88216976 88217107 -165039476 + FLAM_C SINE Alu 1 141 -2 298 211 102 48 chr2 88217234 88217400 -165039183 + L1ME2 LINE L1 4098 4272 -1808 2119 231 88 29 chr2 88217421 88218106 -165038477 + L1ME2 LINE L1 4465 5108 -990 724 160 56 0 chr2 88218106 88218231 -165038352 + FLAM_C SINE Alu 1 132 -1 2119 231 88 29 chr2 88218231 88218949 -165037634 + L1ME2 LINE L1 5108 6088 -10 268 198 12 37 chr2 88219030 88219111 -165037472 + L1MC5 LINE L1 7832 7910 -51 1480 181 115 9 chr2 88219560 88219898 -165036685 + MLT1A2 LTR MaLR 1 374 0 267 293 93 0 chr2 88220402 88220542 -165036041 + L2 LINE L2 2898 3050 -222 185 178 22 0 chr2 88220917 88220962 -165035621 + (ATG)n Simple_repeat Simple_repeat 2 47 0 2028 105 0 30 chr2 88221196 88221518 -165035065 + AluSg SINE Alu 1 313 0 204 226 0 0 chr2 88222923 88222976 -165033607 + A-rich Low_complexity Low_complexity 1 53 0 349 255 94 83 chr2 88224098 88224290 -165032293 + MIR3 SINE MIR 12 205 -3 25 31 0 0 chr2 88224363 88224395 -165032188 + AT_rich Low_complexity Low_complexity 1 32 0 2485 59 0 0 chr2 88224475 88224765 -165031818 + AluSc SINE Alu 1 290 -19 4458 172 140 22 chr2 88224947 88226101 -165030482 - Charlie1 DNA MER1_type 0 2761 1471 209 385 36 0 chr2 88226433 88226516 -165030067 + L2 LINE L2 3184 3269 -44 304 280 72 40 chr2 88226965 88227090 -165029493 + MIR SINE MIR 35 163 -99 186 359 60 60 chr2 88227822 88228137 -165028446 - L2 LINE L2 -556 2758 2444 726 192 60 50 chr2 88228308 88228490 -165028093 - MIR SINE MIR -20 242 59 330 314 44 22 chr2 88230467 88230604 -165025979 - MIR SINE MIR -6 256 117 22 70 0 0 chr2 88230877 88230920 -165025663 + AT_rich Low_complexity Low_complexity 1 43 0 22 35 0 0 chr2 88231355 88231384 -165025199 + AT_rich Low_complexity Low_complexity 1 29 0 2351 179 42 0 chr2 88231903 88232310 -165024273 + MSTB LTR MaLR 3 426 0 288 335 138 46 chr2 88233164 88233424 -165023159 + L2 LINE L2 2816 3099 -173 1004 212 18 46 chr2 88233674 88233957 -165022626 + LTR43 LTR ERV1 191 465 -137 255 373 40 0 chr2 88234881 88235007 -165021576 + L2 LINE L2 3138 3268 -4 4794 144 26 46 chr2 88235362 88236386 -165020197 + L1MD1 LINE L1 5239 6241 -1 2640 141 34 30 chr2 88236777 88237251 -165019332 + LTR12 LTR ERV1 5 480 -234 23 0 0 0 chr2 88237270 88237293 -165019290 + AT_rich Low_complexity Low_complexity 1 23 0 2024 183 25 77 chr2 88238053 88238181 -165018402 + L1ME2 LINE L1 5355 5488 -676 2244 73 11 0 chr2 88238181 88238468 -165018115 + AluSp SINE Alu 1 290 -23 2024 183 25 77 chr2 88238468 88238901 -165017682 + L1ME2 LINE L1 5488 5887 -277 28 29 0 0 chr2 88240741 88240776 -165015807 + AT_rich Low_complexity Low_complexity 1 35 0 632 309 0 11 chr2 88240883 88241071 -165015512 + MIR SINE MIR 58 243 -19 1037 245 81 23 chr2 88241730 88242040 -165014543 + L2 LINE L2 972 1299 -2015 693 172 0 98 chr2 88242042 88242216 -165014367 - MER20 DNA MER1_type -8 211 55 6962 94 9 26 chr2 88242330 88243405 -165013178 - MER11C LTR ERVK -14 1057 1 2252 242 115 32 chr2 88243405 88244490 -165012093 + L2 LINE L2 2141 3313 0 289 273 227 20 chr2 88244552 88244702 -165011881 - MIR3 SINE MIR -13 195 15 205 289 0 0 chr2 88244708 88244753 -165011830 + MER5C DNA MER1_type 1 45 -279 227 316 0 0 chr2 88244762 88244819 -165011764 + polypurine Low_complexity Low_complexity 4 60 0 385 237 21 21 chr2 88244891 88244988 -165011595 + MER5C DNA MER1_type 228 324 0 25 0 0 0 chr2 88245607 88245632 -165010951 + AT_rich Low_complexity Low_complexity 1 25 0 1870 171 3 7 chr2 88245828 88246120 -165010463 - AluJb SINE Alu -21 291 1 198 91 0 0 chr2 88246259 88246292 -165010291 + (A)n Simple_repeat Simple_repeat 1 33 0 872 230 33 9 chr2 88246319 88246532 -165010051 + MER58A DNA MER1_type 7 224 0 216 0 0 0 chr2 88246609 88246633 -165009950 + (A)n Simple_repeat Simple_repeat 1 24 0 27 29 0 0 chr2 88246915 88246949 -165009634 + AT_rich Low_complexity Low_complexity 1 34 0 21 36 0 0 chr2 88247662 88247690 -165008893 + AT_rich Low_complexity Low_complexity 1 28 0 225 0 0 0 chr2 88247852 88247877 -165008706 + (A)n Simple_repeat Simple_repeat 1 25 0 258 32 0 0 chr2 88249366 88249397 -165007186 + (CATAT)n Simple_repeat Simple_repeat 5 35 0 318 324 99 9 chr2 88250108 88250219 -165006364 - L2 LINE L2 -1 3271 3151 272 350 50 33 chr2 88250805 88250925 -165005658 + L2 LINE L2 3143 3264 -8 2155 113 0 7 chr2 88251514 88251806 -165004777 - AluSx SINE Alu -22 290 1 265 398 0 8 chr2 88251967 88252090 -165004493 + MIR SINE MIR 13 134 -128 348 283 40 12 chr2 88252199 88252372 -165004211 - L1ME LINE L1 -337 5784 5607 189 333 65 11 chr2 88252485 88252578 -165004005 + L2 LINE L2 3175 3272 -41 2848 9 0 12 chr2 88252638 88252958 -165003625 + AluYb8 SINE Alu 1 316 -2 1517 226 13 40 chr2 88253415 88253624 -165002959 - L1ME LINE L1 -551 5615 5402 2354 93 0 3 chr2 88253624 88253925 -165002658 + AluSc SINE Alu 1 300 -9 1517 226 13 40 chr2 88253925 88254467 -165002116 - L1ME LINE L1 -764 5402 4885 2393 59 0 3 chr2 88254634 88254923 -165001660 - AluY SINE Alu -7 304 17 274 243 157 7 chr2 88254924 88254990 -165001593 + MER104 DNA Tc2 20 75 -1823 1936 83 4 0 chr2 88254990 88255232 -165001351 - AluSp SINE Alu -22 291 49 274 243 157 7 chr2 88255232 88255305 -165001278 + MER104 DNA Tc2 75 180 0 363 333 0 9 chr2 88255863 88255977 -165000606 + L2 LINE L2 3122 3234 -38 469 174 22 11 chr2 88256068 88256160 -165000423 - MIR SINE MIR -43 219 127 200 310 99 0 chr2 88256448 88256519 -165000064 + L2 LINE L2 3221 3298 -15 274 230 23 81 chr2 88256919 88257006 -164999577 + L2 LINE L2 3217 3298 -15 394 202 24 36 chr2 88257604 88257688 -164998895 - MER5A DNA MER1_type -93 96 14 294 305 12 0 chr2 88257865 88257947 -164998636 - MER5A DNA MER1_type 0 189 107 376 278 49 68 chr2 88258059 88258122 -164998461 + MIR3 SINE MIR 5 68 -140 843 193 161 4 chr2 88258122 88258402 -164998181 - MER33 DNA MER1_type 0 324 1 376 278 49 68 chr2 88258402 88258543 -164998040 + MIR3 SINE MIR 68 205 -3 765 85 8 17 chr2 88259062 88259180 -164997403 - AluSg1 SINE Alu -192 117 1 508 230 46 20 chr2 88260360 88260512 -164996071 + MER104 DNA Tc2 1 156 -24 21 36 0 0 chr2 88261788 88261816 -164994767 + AT_rich Low_complexity Low_complexity 1 28 0 324 273 152 10 chr2 88261923 88262121 -164994462 - L1MC5 LINE L1 -224 7737 7512 211 241 0 52 chr2 88262771 88262829 -164993754 + L2 LINE L2 3244 3298 -15 495 309 119 21 chr2 88262950 88263186 -164993397 - MIR SINE MIR -2 260 2 2364 68 0 0 chr2 88263192 88263486 -164993097 + AluY SINE Alu 8 301 -10 267 279 116 47 chr2 88263529 88263615 -164992968 + MIR3 SINE MIR 81 172 -36 33 0 0 0 chr2 88264338 88264371 -164992212 + AT_rich Low_complexity Low_complexity 1 33 0 712 197 0 0 chr2 88264463 88264585 -164991998 + AluJb SINE Alu 170 291 -21 745 296 100 16 chr2 88265005 88265455 -164991128 + HAL1b LINE L1 53 540 -808 6001 24 0 1 chr2 88265488 88266187 -164990396 - L1PA3 LINE L1 0 6155 5458 5283 21 0 3 chr2 88266187 88266875 -164989708 + L1PA3 LINE L1 4761 5445 -710 8747 185 49 17 chr2 88267344 88267380 -164989203 - L1P4 LINE L1 -485 6384 6351 2598 99 6 3 chr2 88267380 88267743 -164988840 + THE1B LTR MaLR 1 364 0 8747 185 49 17 chr2 88267743 88270106 -164986477 - L1P4 LINE L1 -518 6351 3945 1685 214 11 40 chr2 88270112 88270621 -164985962 - L1P4 LINE L1 -3515 3334 2842 851 296 92 84 chr2 88270704 88271745 -164984838 + L1MC4a LINE L1 4228 5276 -870 302 111 0 19 chr2 88271781 88271835 -164984748 + L1 LINE L1 4612 4664 -1482 1600 104 25 21 chr2 88271939 88272180 -164984403 + L1PA10 LINE L1 5912 6153 -15 1929 235 81 4 chr2 88272199 88272756 -164983827 + L1MC4a LINE L1 5315 5914 -1894 2578 221 68 70 chr2 88272793 88273693 -164982890 + L1MC4a LINE L1 5986 6883 -925 231 250 0 0 chr2 88273696 88273748 -164982835 + LTR30 LTR ERV1 1 52 -670 1816 114 170 175 chr2 88273752 88274514 -164982069 + LTR12 LTR ERV1 57 580 -134 3204 221 64 28 chr2 88274538 88275090 -164981493 + L1MC4 LINE L1 7027 7632 -410 2019 110 16 39 chr2 88275090 88275400 -164981183 + AluSg1 SINE Alu 3 305 -4 3204 221 64 28 chr2 88275400 88275827 -164980756 + L1MC4 LINE L1 7632 8042 0 294 129 14 14 chr2 88277701 88277771 -164978812 - L1ME4a LINE L1 -3 6118 6049 541 253 111 67 chr2 88277932 88278175 -164978408 - L1ME LINE L1 -342 5779 5513 2373 102 0 0 chr2 88278175 88278480 -164978103 + AluSq SINE Alu 1 305 -8 541 253 111 67 chr2 88278480 88278596 -164977987 - L1ME LINE L1 -608 5513 5404 525 284 123 19 chr2 88278614 88278825 -164977758 + MIR SINE MIR 21 253 -9 373 288 65 12 chr2 88279052 88279222 -164977361 - L1ME LINE L1 -905 5241 5063 1678 173 0 24 chr2 88279751 88280179 -164976404 - AluJb SINE Alu 0 421 1 1472 218 148 50 chr2 88280236 88280832 -164975751 - MLT1E1 LTR MaLR 0 654 1 416 346 86 0 chr2 88280911 88281073 -164975510 + MIR3 SINE MIR 32 207 -1 424 322 100 72 chr2 88281627 88282476 -164974107 + L2 LINE L2 1880 2752 -562 253 286 99 19 chr2 88282983 88283144 -164973439 - L1ME4a LINE L1 -17 6104 5931 481 276 13 32 chr2 88283815 88283971 -164972612 - MER5B DNA MER1_type -2 176 24 349 290 13 13 chr2 88283989 88284009 -164972574 - L1MA10 LINE L1 -3 6331 6312 1268 207 8 75 chr2 88284009 88284271 -164972312 - L1ME2 LINE L1 -16 6148 5851 2184 118 7 0 chr2 88284271 88284568 -164972015 - AluSx SINE Alu -11 301 3 1268 207 8 75 chr2 88284568 88284805 -164971778 - L1ME2 LINE L1 -313 5851 5600 266 254 134 0 chr2 88284814 88284881 -164971702 + MIR SINE MIR 69 144 -118 15905 148 23 8 chr2 88286212 88291473 -164965110 - L1MA1 LINE L1 0 7721 2373 387 206 0 14 chr2 88292767 88292840 -164963743 + L2 LINE L2 3204 3275 -38 5158 65 19 0 chr2 88292966 88293614 -164962969 + PABL_A LTR ERV1 1 660 0 343 258 227 26 chr2 88293695 88293889 -164962694 + MIR SINE MIR 29 261 -1 4142 78 45 2 chr2 88294171 88294746 -164961837 + MER4A LTR ERV1 1 600 0 4340 76 0 0 chr2 88296608 88297162 -164959421 - MER41A LTR ERV1 0 554 1 1889 95 4 0 chr2 88297162 88297415 -164959168 - MER41A-int LTR ERV1 -2 5944 5691 2071 79 0 0 chr2 88297415 88297669 -164958914 + AluY SINE Alu 1 254 -57 273 356 38 8 chr2 88299618 88299750 -164956833 - L2 LINE L2 0 3272 3137 214 303 109 50 chr2 88299841 88299960 -164956623 + MIR SINE MIR 18 143 -65 2212 175 33 102 chr2 88300911 88301015 -164955568 - MLT1D LTR MaLR 0 505 395 884 9 0 19 chr2 88301015 88301123 -164955460 + L1PA2 LINE L1 6050 6155 0 2212 175 33 102 chr2 88301123 88301560 -164955023 - MLT1D LTR MaLR -110 395 1 209 122 0 82 chr2 88301853 88301902 -164954681 + (TTTC)n Simple_repeat Simple_repeat 4 48 0 417 314 8 0 chr2 88302164 88302288 -164954295 + MER69 DNA AcHobo 1 125 -2401 211 102 20 41 chr2 88302292 88302341 -164954242 + (TTTC)n Simple_repeat Simple_repeat 4 51 0 233 139 47 0 chr2 88302490 88302533 -164954050 - MER5A DNA MER1_type 0 189 145 253 121 0 52 chr2 88302748 88302806 -164953777 + (TTTC)n Simple_repeat Simple_repeat 2 56 0 2599 225 17 32 chr2 88302816 88303080 -164953503 - L1ME1 LINE L1 -3 6163 5897 2042 134 3 0 chr2 88303080 88303370 -164953213 - AluSx SINE Alu -21 291 1 2599 225 17 32 chr2 88303370 88303767 -164952816 - L1ME1 LINE L1 -269 5897 5512 330 325 93 35 chr2 88303847 88304158 -164952425 + MLT1L LTR MaLR 44 372 -243 963 270 59 26 chr2 88304241 88304548 -164952035 - HAL1 LINE L1 -1586 921 605 338 310 70 14 chr2 88304824 88304966 -164951617 - L2 LINE L2 -36 3277 3128 21 57 0 0 chr2 88305287 88305322 -164951261 + AT_rich Low_complexity Low_complexity 1 35 0 2039 94 30 24 chr2 88306361 88306659 -164949924 - AluSq SINE Alu -11 302 3 1557 237 42 33 chr2 88306748 88307267 -164949316 - L1MC3 LINE L1 -1417 7163 6640 2316 181 64 16 chr2 88307269 88307756 -164948827 + L1M4 LINE L1 5255 5764 -420 908 198 27 0 chr2 88307863 88308085 -164948498 - L1MC3 LINE L1 -1302 5639 5412 1364 227 6 0 chr2 88308090 88308403 -164948180 - L1MC3 LINE L1 -3345 3596 3282 3413 188 30 8 chr2 88308404 88309062 -164947521 - L1MC3 LINE L1 0 7785 7113 307 315 39 0 chr2 88309172 88309302 -164947281 - HAL1 LINE L1 -2196 311 177 245 327 115 0 chr2 88309316 88309429 -164947154 - HAL1 LINE L1 -2369 138 13 295 146 0 0 chr2 88309806 88309854 -164946729 - MER58A DNA MER1_type 0 224 177 434 258 0 21 chr2 88309868 88309961 -164946622 - MER58A DNA MER1_type -16 91 1 277 319 164 13 chr2 88311125 88311495 -164945088 + L3 LINE CR1 986 1459 -118 545 233 161 0 chr2 88311577 88311734 -164944849 - MER5A DNA MER1_type 0 189 4 608 233 47 64 chr2 88311745 88311917 -164944666 - MER5B DNA MER1_type 0 178 10 2178 103 7 0 chr2 88311931 88312221 -164944362 - AluSx SINE Alu -20 292 1 1989 260 63 51 chr2 88312836 88314906 -164941677 - L1MC3 LINE L1 -4007 3115 814 250 289 64 72 chr2 88315193 88315561 -164941022 - L1MC3 LINE L1 -6060 694 18 2333 97 0 19 chr2 88316328 88316636 -164939947 + AluY SINE Alu 1 302 -9 37683 47 2 2 chr2 88317557 88322226 -164934357 - L1P LINE L1 -1459 4687 22 867 198 21 21 chr2 88322217 88322454 -164934129 - L1M4 LINE L1 -2167 4477 4241 * 2171 228 81 9 chr2 88322450 88322695 -164933888 - L1M4 LINE L1 -3327 3317 3091 1991 172 20 42 chr2 88322695 88323097 -164933486 - MSTD LTR MaLR -3 393 1 2171 228 81 9 chr2 88323097 88323698 -164932885 - L1M4 LINE L1 -3553 3091 2415 861 194 28 45 chr2 88323697 88323944 -164932639 - L1M4 LINE L1 -5417 1125 883 * 288 263 0 0 chr2 88323965 88324022 -164932561 - L1M4 LINE L1 -6483 59 3 485 274 83 83 chr2 88324305 88324736 -164931847 - L1MEd LINE L1 -5583 536 106 596 204 36 22 chr2 88324816 88324953 -164931630 + MIR SINE MIR 48 186 -76 193 269 221 34 chr2 88325035 88325184 -164931399 + MIR SINE MIR 75 251 -11 297 0 0 0 chr2 88325393 88325426 -164931157 + (CA)n Simple_repeat Simple_repeat 1 33 0 419 327 9 0 chr2 88325836 88325949 -164930634 + MIR SINE MIR 32 145 -63 5104 207 24 8 chr2 88326049 88327184 -164929399 - L1P LINE L1 -3073 3073 1921 468 273 161 6 chr2 88330702 88330863 -164925720 + MER5A DNA MER1_type 4 189 0 1308 290 120 18 chr2 88332568 88333389 -164923194 - L2 LINE L2 0 3313 2409 1673 129 30 79 chr2 88333389 88333752 -164922831 - MER4A LTR ERV1 0 664 261 560 105 11 21 chr2 88333752 88333847 -164922736 - MER4A LTR ERV1 -566 98 5 2461 11 0 0 chr2 88333857 88334128 -164922455 - AluY SINE Alu 0 311 41 222 357 24 0 chr2 88334143 88334227 -164922356 - L2 LINE L2 -903 2411 2326 22 0 0 0 chr2 88336685 88336707 -164919876 + AT_rich Low_complexity Low_complexity 1 22 0 31 44 0 0 chr2 88336791 88336836 -164919747 + AT_rich Low_complexity Low_complexity 1 45 0 26 74 0 0 chr2 88337499 88337553 -164919030 + AT_rich Low_complexity Low_complexity 1 54 0 28 29 0 0 chr2 88337791 88337826 -164918757 + AT_rich Low_complexity Low_complexity 1 35 0 714 250 127 28 chr2 88340594 88340806 -164915777 - MIR SINE MIR -27 235 3 294 333 53 9 chr2 88340850 88340964 -164915619 - MIR SINE MIR -32 230 112 21 0 0 0 chr2 88341601 88341622 -164914961 + AT_rich Low_complexity Low_complexity 1 21 0 200 194 0 0 chr2 88341948 88341984 -164914599 + (CA)n Simple_repeat Simple_repeat 1 36 0 397 273 175 39 chr2 88342061 88342215 -164914368 - MER5B DNA MER1_type 0 178 4 568 231 149 0 chr2 88342241 88342375 -164914208 - MER5A DNA MER1_type -35 154 1 190 394 0 10 chr2 88342989 88343088 -164913495 - L2 LINE L2 -556 2758 2661 297 351 101 7 chr2 88344448 88344596 -164911987 - MER5A DNA MER1_type -2 187 26 2022 131 0 0 chr2 88345517 88345835 -164910748 + AluSx SINE Alu 3 320 0 202 161 16 48 chr2 88346242 88346304 -164910279 + T-rich Low_complexity Low_complexity 4 63 0 22 0 0 0 chr2 88346580 88346602 -164909981 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr2 88347144 88347173 -164909410 + AT_rich Low_complexity Low_complexity 1 29 0 1192 154 15 66 chr2 88348544 88348816 -164907767 - L1MB8 LINE L1 -16 6162 5905 918 143 19 13 chr2 88348816 88348970 -164907613 + MER2 DNA MER2_type 1 155 -190 1383 156 98 26 chr2 88349072 88349379 -164907204 - L1MB8 LINE L1 -289 5889 5561 429 189 67 0 chr2 88351029 88351119 -164905464 + L1MA9 LINE L1 6179 6274 -38 1791 132 82 22 chr2 88352716 88353034 -164903549 - MER1B DNA MER1_type 0 337 1 323 140 35 0 chr2 88353138 88353195 -164903388 + MER58 DNA MER1_type 2362 2420 0 258 302 111 40 chr2 88353204 88353330 -164903253 + MIR SINE MIR 16 150 -58 444 291 39 34 chr2 88353443 88353622 -164902961 - MLT1K LTR MaLR -36 552 373 1970 133 47 39 chr2 88353779 88354139 -164902444 + THE1C LTR MaLR 1 363 -12 493 347 45 20 chr2 88354888 88355133 -164901450 - MIR SINE MIR -6 256 6 426 39 0 0 chr2 88355349 88355401 -164901182 + (CA)n Simple_repeat Simple_repeat 2 53 0 268 226 11 153 chr2 88355964 88356141 -164900442 - MLT1K LTR MaLR -164 424 273 192 304 184 8 chr2 88356572 88356697 -164899886 - L2 LINE L2 -202 3070 2924 527 218 15 30 chr2 88356960 88357093 -164899490 + MER94 DNA DNA 2 132 -2 643 167 9 171 chr2 88357337 88357495 -164899088 + MER5A DNA MER1_type 3 116 -73 2356 74 0 13 chr2 88357495 88357804 -164898779 - AluY SINE Alu -6 305 1 643 167 9 171 chr2 88357804 88357867 -164898716 + MER5A DNA MER1_type 116 188 -1 2251 137 40 0 chr2 88358600 88358950 -164897633 + THE1B LTR MaLR 1 364 0 844 130 80 0 chr2 88359358 88359520 -164897063 - L1MA9 LINE L1 -10 6302 6128 854 70 0 0 chr2 88359799 88359914 -164896669 + L1PA13 LINE L1 6048 6162 -1 316 234 124 36 chr2 88360212 88360349 -164896234 - L1ME3A LINE L1 -31 6139 5991 3730 157 40 117 chr2 88360349 88361409 -164895174 - MER52C LTR ERV1 0 1278 301 386 289 126 13 chr2 88361453 88361692 -164894891 - L1ME3A LINE L1 -217 5945 5680 681 213 76 51 chr2 88361692 88361889 -164894694 - MIR SINE MIR -60 202 1 2940 142 6 18 chr2 88361993 88362499 -164894084 - L1PA13 LINE L1 0 6163 5664 22 56 0 0 chr2 88363786 88363822 -164892761 + AT_rich Low_complexity Low_complexity 1 36 0 1978 163 0 0 chr2 88364479 88364785 -164891798 + AluSx SINE Alu 1 306 -6 2262 95 0 16 chr2 88365263 88365568 -164891015 + AluSg SINE Alu 1 300 -10 813 324 47 56 chr2 88365623 88366237 -164890346 + L1M3d LINE L1 9 520 -5371 * 967 169 56 75 chr2 88366234 88366553 -164890030 + L1MB1 LINE L1 4222 4534 -1612 3197 142 33 26 chr2 88366653 88367224 -164889359 + L1MB1 LINE L1 5594 6168 0 23 0 0 0 chr2 88367230 88367253 -164889330 + AT_rich Low_complexity Low_complexity 1 23 0 1348 113 36 14 chr2 88368593 88368827 -164887756 - MER41A-int LTR ERV1 -2575 3834 2199 * 2622 107 12 15 chr2 88368820 88369222 -164887361 - MER41A-int LTR ERV1 -3782 3755 3355 308 127 55 0 chr2 88369213 88369268 -164887315 - MER41A-int LTR ERV1 -3722 2224 2167 * 5307 135 67 13 chr2 88369264 88370998 -164885585 - MER41A-int LTR ERV1 -3929 2017 3 3726 103 8 0 chr2 88371084 88371598 -164884985 - MER41A LTR ERV1 0 554 37 2216 74 105 44 chr2 88371598 88372010 -164884573 - LTR14B LTR ERVK 0 608 1 620 30 45 226 chr2 88372013 88372146 -164884437 - HERVK14 LTR ERVK 0 5945 5837 368 194 28 14 chr2 88372146 88372218 -164884365 - MER41C LTR ERV1 -476 78 6 43509 53 8 1 chr2 88372219 88377873 -164878710 - HERVK14 LTR ERVK -182 5763 1 1919 71 18 192 chr2 88377885 88378265 -164878318 - LTR14B LTR ERVK -30 578 1 294 151 19 0 chr2 88378265 88378309 -164878274 - MER41A LTR ERV1 -509 45 1 1004 227 29 124 chr2 88379639 88380189 -164876394 - LTR1B LTR ERV1 -328 498 1 307 255 78 10 chr2 88380875 88380977 -164875606 + LTR37B LTR ERV1 50 158 -310 650 194 12 62 chr2 88381284 88381444 -164875139 + MIR SINE MIR 111 262 0 287 203 72 0 chr2 88381450 88381519 -164875064 - MLT1K LTR MaLR -78 510 437 2349 105 0 0 chr2 88381519 88381823 -164874760 + AluSx SINE Alu 1 304 -8 250 328 22 60 chr2 88382300 88382434 -164874149 + MIR SINE MIR 7 135 -127 233 324 55 28 chr2 88383011 88383156 -164873427 + MIR SINE MIR 108 256 -6 1783 168 3 26 chr2 88383792 88384102 -164872481 - AluJo SINE Alu -9 303 1 22 70 0 0 chr2 88384501 88384544 -164872039 + AT_rich Low_complexity Low_complexity 1 43 0 2346 266 72 13 chr2 88384583 88385219 -164871364 - L1MDa LINE L1 -5833 707 34 1663 228 25 33 chr2 88385300 88385695 -164870888 - MLT1D LTR MaLR -113 392 1 13171 119 37 19 chr2 88385866 88387696 -164868887 - Tigger1 DNA MER2_type -352 2066 194 203 59 0 29 chr2 88387696 88387730 -164868853 + (TAA)n Simple_repeat Simple_repeat 3 35 0 13171 119 37 19 chr2 88387730 88387926 -164868657 - Tigger1 DNA MER2_type -2224 194 3 2447 203 80 27 chr2 88387928 88388489 -164868094 - MLT1E LTR MaLR -2 591 1 2480 87 0 0 chr2 88440940 88441249 -164815334 + AluSq SINE Alu 1 309 -4 1618 285 229 11 chr2 88441385 88442971 -164813612 - L2 LINE L2 -39 3274 1347 361 282 145 8 chr2 88443984 88444239 -164812344 + L2 LINE L2 2813 3102 -211 272 211 0 0 chr2 88444867 88444919 -164811664 + L2 LINE L2 3262 3313 0 492 250 40 0 chr2 88447631 88447755 -164808828 - MIR SINE MIR -58 204 76 3116 209 36 3 chr2 88447848 88448457 -164808126 + MER82 DNA MER2_type 11 639 -14 1660 161 0 4 chr2 88448602 88448869 -164807714 + AluJb SINE Alu 36 301 -11 298 320 57 52 chr2 88448933 88449127 -164807456 - L2 LINE L2 -193 3079 2885 667 281 39 42 chr2 88450187 88450409 -164806174 + MIR SINE MIR 3 230 -32 3367 79 4 60 chr2 88450562 88451032 -164805551 + MLT2A1 LTR ERVL 1 444 0 226 274 194 29 chr2 88451392 88451567 -164805016 + L2 LINE L2 3020 3223 -49 2141 120 106 19 chr2 88451625 88451984 -164804599 + MLT1B LTR MaLR 1 390 0 429 20 0 0 chr2 88455666 88455716 -164800867 + (CA)n Simple_repeat Simple_repeat 1 50 0 5106 192 32 47 chr2 88456177 88456516 -164800067 - L1MC/D LINE L1 -748 5398 5055 266 174 0 0 chr2 88456516 88456562 -164800021 + U5 snRNA snRNA 1 46 -70 5106 192 32 47 chr2 88456562 88457631 -164798952 - L1MC/D LINE L1 -1091 5055 4096 29 78 0 0 chr2 88458937 88459001 -164797582 + AT_rich Low_complexity Low_complexity 1 64 0 4147 232 80 41 chr2 88459160 88459462 -164797121 + L1MC4 LINE L1 6360 6649 -1393 1523 213 7 0 chr2 88459462 88459748 -164796835 + AluJo SINE Alu 3 290 -22 4147 232 80 41 chr2 88459748 88460789 -164795794 + L1MC4 LINE L1 6649 7755 -287 238 302 23 12 chr2 88460959 88461045 -164795538 - MER112 DNA MER1_type -7 253 167 1249 248 67 20 chr2 88461047 88461706 -164794877 + L1M4 LINE L1 4093 4799 -1347 440 274 24 0 chr2 88461714 88461838 -164794745 + L1ME3 LINE L1 5997 6123 -39 26336 63 8 3 chr2 88461902 88468010 -164788573 + L1PA5 LINE L1 2 6153 -1 370 230 95 0 chr2 88468031 88468157 -164788426 - MER112 DNA MER1_type -104 156 19 36 53 0 0 chr2 88469202 88469259 -164787324 + AT_rich Low_complexity Low_complexity 1 57 0 783 165 8 0 chr2 88469270 88469403 -164787180 + AluJo SINE Alu 1 134 -178 2110 129 3 3 chr2 88469509 88469803 -164786780 + AluSg SINE Alu 1 294 -16 1210 192 9 9 chr2 88470274 88470498 -164786085 + MER58A DNA MER1_type 1 224 0 288 343 86 0 chr2 88470777 88470917 -164785666 - L3 LINE CR1 -238 1339 1188 * 367 271 47 19 chr2 88470911 88471018 -164785565 + L2 LINE L2 3162 3271 -1 25 0 0 0 chr2 88471131 88471156 -164785427 + AT_rich Low_complexity Low_complexity 1 25 0 2213 109 0 13 chr2 88471554 88471857 -164784726 + AluSx SINE Alu 1 299 -13 250 298 86 45 chr2 88472595 88472793 -164783790 - L3 LINE CR1 -49 1528 1323 848 246 95 23 chr2 88473064 88473378 -164783205 - MLT1G1 LTR MaLR -291 299 1 247 265 20 49 chr2 88473378 88473480 -164783103 - MIR SINE MIR -149 113 15 * 667 336 122 30 chr2 88473473 88473973 -164782610 - L3 LINE CR1 -272 1305 760 286 324 123 6 chr2 88474259 88474429 -164782154 + L3 LINE CR1 1248 1437 -140 1329 210 39 27 chr2 88475162 88475496 -164781087 - MER58B DNA MER1_type -1 340 3 606 28 0 0 chr2 88476016 88476088 -164780495 + (TAGA)n Simple_repeat Simple_repeat 2 73 0 2285 83 24 0 chr2 88477063 88477353 -164779230 + AluY SINE Alu 1 297 -14 419 288 67 45 chr2 88478730 88479067 -164777516 + L1ME LINE L1 5257 5600 -521 314 387 35 6 chr2 88479084 88479257 -164777326 + L1ME LINE L1 5659 5836 -285 265 109 18 0 chr2 88481433 88481488 -164775095 + Charlie4 DNA MER1_type 1825 1880 -81 3547 120 26 2 chr2 88482237 88482803 -164773780 + L1PA16 LINE L1 5587 6166 0 2781 263 101 5 chr2 88483521 88484379 -164772204 - L2 LINE L2 -1385 1929 989 283 287 88 59 chr2 88484432 88484568 -164772015 - L2 LINE L2 0 3272 3133 2929 88 31 12 chr2 88485039 88485459 -164771124 - MSTA LTR MaLR 0 428 1 347 323 96 32 chr2 88485734 88485954 -164770629 + MIR SINE MIR 16 249 -13 2176 96 24 0 chr2 88486144 88486436 -164770147 - AluY SINE Alu -12 299 1 27 29 0 0 chr2 88487241 88487275 -164769308 + AT_rich Low_complexity Low_complexity 1 34 0 265 354 15 31 chr2 88488110 88488240 -164768343 - L2 LINE L2 -113 3159 3032 1828 206 3 0 chr2 88489799 88490139 -164766444 - MER58B DNA MER1_type 0 341 1 257 235 20 39 chr2 88490265 88490367 -164766216 + T-rich Low_complexity Low_complexity 5 104 0 1985 135 13 22 chr2 88491757 88492069 -164764514 + AluSq SINE Alu 1 309 -4 694 172 11 28 chr2 88492084 88492264 -164764319 + GA-rich Low_complexity Low_complexity 1 177 0 288 328 44 38 chr2 88492485 88492668 -164763915 - MER20B DNA MER1_type -599 184 1 400 313 78 0 chr2 88492671 88492799 -164763784 - MIR3 SINE MIR -56 152 15 260 298 21 11 chr2 88493259 88493353 -164763230 - MIR3 SINE MIR -12 196 102 186 133 0 0 chr2 88494455 88494485 -164762098 + (GAA)n Simple_repeat Simple_repeat 2 31 0 215 255 0 0 chr2 88494661 88494708 -164761875 + GA-rich Low_complexity Low_complexity 2 48 0 180 167 104 0 chr2 88494857 88494905 -164761678 - L2 LINE L2 -337 2977 2925 667 289 12 0 chr2 88495122 88495288 -164761295 - MIR SINE MIR -5 257 90 344 297 108 0 chr2 88495746 88495968 -164760615 - MER112 DNA MER1_type -14 246 1 822 182 13 87 chr2 88496104 88496335 -164760248 - MER58C DNA MER1_type -1 214 1 1241 140 0 9 chr2 88498039 88498261 -164758322 + L1MA3 LINE L1 5983 6202 -103 184 316 95 0 chr2 88498359 88498454 -164758129 + MIR SINE MIR 77 180 -82 551 314 47 5 chr2 88498702 88498893 -164757690 - MIR SINE MIR -48 214 16 320 213 100 0 chr2 88499700 88499780 -164756803 - L1MC4 LINE L1 -1339 6703 6616 240 253 25 0 chr2 88499942 88500021 -164756562 + (TA)n Simple_repeat Simple_repeat 1 81 0 560 283 59 25 chr2 88501018 88501255 -164755328 + MIR SINE MIR 8 252 -10 203 264 0 56 chr2 88502272 88502344 -164754239 + L2 LINE L2 3023 3090 -182 330 189 23 83 chr2 88502948 88503080 -164753503 - HAL1 LINE L1 0 2507 2384 1834 161 3 40 chr2 88503100 88503424 -164753159 - AluJo SINE Alu 0 312 1 420 37 0 0 chr2 88503471 88503525 -164753058 + (CA)n Simple_repeat Simple_repeat 2 55 0 872 265 100 50 chr2 88503697 88503869 -164752714 - HAL1 LINE L1 -2013 494 332 2862 10 0 0 chr2 88503869 88504179 -164752404 - AluYa5 SINE Alu -1 310 1 872 265 100 50 chr2 88504179 88504467 -164752116 - HAL1 LINE L1 -2175 332 11 1028 175 145 0 chr2 88505082 88505351 -164751232 + MER33 DNA MER1_type 17 324 0 2419 89 0 0 chr2 88506547 88506851 -164749732 + AluSx SINE Alu 1 304 -8 31 58 0 0 chr2 88506903 88506955 -164749628 + AT_rich Low_complexity Low_complexity 1 52 0 740 246 74 58 chr2 88508230 88508577 -164748006 - MLT1H1 LTR MaLR -163 404 11 187 292 185 62 chr2 88508622 88508752 -164747831 + L2 LINE L2 3122 3267 -5 2414 37 37 0 chr2 88510088 88510388 -164746195 + L1PA4 LINE L1 5845 6155 0 23 0 0 0 chr2 88510388 88510411 -164746172 + AT_rich Low_complexity Low_complexity 1 23 0 1010 160 38 47 chr2 88510942 88511154 -164745429 - MER6B DNA MER2_type 0 210 1 2097 131 30 56 chr2 88511531 88511904 -164744679 + THE1B LTR MaLR 1 363 -1 322 328 107 0 chr2 88511990 88512121 -164744462 + MIR3 SINE MIR 9 153 -55 615 308 34 10 chr2 88512788 88512996 -164743587 - MIR SINE MIR -48 214 2 205 323 71 20 chr2 88513095 88513194 -164743389 - MIR SINE MIR -137 125 22 1631 76 36 13 chr2 88514053 88514277 -164742306 + MER30 DNA MER1_type 1 229 -1 3595 262 95 19 chr2 88514555 88515805 -164740778 + L1M4b LINE L1 10 1354 -5505 531 178 0 30 chr2 88515805 88515906 -164740677 - MER46A DNA MER2_type 0 236 139 2491 181 32 2 chr2 88515906 88516398 -164740185 + L1MB8 LINE L1 5663 6169 -9 200 261 14 14 chr2 88517385 88517454 -164739129 + (TA)n Simple_repeat Simple_repeat 2 70 0 706 229 48 26 chr2 88517481 88517708 -164738875 - L1ME3A LINE L1 0 6170 5939 2194 45 26 0 chr2 88517748 88518013 -164738570 - AluY SINE Alu -11 300 29 13092 223 25 23 chr2 88518493 88523875 -164732708 - L1PA16 LINE L1 0 6869 1447 1267 251 12 42 chr2 88524267 88524598 -164731985 - L1PA16 LINE L1 -6085 764 444 314 385 34 8 chr2 88524620 88524737 -164731846 - L1M2 LINE L1 -6064 1521 1402 231 344 33 16 chr2 88525119 88525241 -164731342 - L1M2 LINE L1 -6062 1523 1400 1412 295 32 10 chr2 88525333 88525778 -164730805 - L1PA12 LINE L1 -6395 1190 2 1023 155 40 11 chr2 88526024 88526198 -164730385 + MER20 DNA MER1_type 41 219 0 207 188 12 38 chr2 88526254 88526334 -164730249 + CT-rich Low_complexity Low_complexity 3 80 0 1985 133 3 3 chr2 88527141 88527427 -164729156 + AluSx SINE Alu 1 286 -26 406 356 46 4 chr2 88528204 88528443 -164728140 - L1M4 LINE L1 -3632 2514 2266 2390 72 0 3 chr2 88528985 88529290 -164727293 + AluY SINE Alu 1 304 -7 305 336 59 41 chr2 88529718 88530057 -164726526 - L2 LINE L2 -993 2321 1977 2555 178 12 0 chr2 88530295 88530716 -164725867 - MSTB LTR MaLR 0 426 1 8297 188 25 25 chr2 88530716 88532368 -164724215 - MSTB-int LTR MaLR 0 1651 1 2549 180 9 0 chr2 88532368 88532790 -164723793 - MSTB LTR MaLR 0 426 1 318 283 120 40 chr2 88532899 88533175 -164723408 - L2 LINE L2 -2306 1008 711 271 232 85 0 chr2 88533513 88533595 -164722988 + L1MC5 LINE L1 7483 7571 -390 774 167 56 126 chr2 88533688 88533792 -164722791 + L1MC5 LINE L1 7609 7719 -242 1794 163 31 7 chr2 88533792 88534086 -164722497 - AluJb SINE Alu -11 301 1 774 167 56 126 chr2 88534086 88534322 -164722261 + L1MC5 LINE L1 7719 7925 -36 1029 178 22 0 chr2 88535341 88535526 -164721057 - MER5A DNA MER1_type 0 189 1 6041 192 50 23 chr2 88536063 88537107 -164719476 - L1MB8 LINE L1 -8 6175 5161 2109 91 11 0 chr2 88537107 88537381 -164719202 + AluSp SINE Alu 31 307 -6 6041 192 50 23 chr2 88537381 88537429 -164719154 - L1MB8 LINE L1 -1022 5161 5116 2333 92 3 0 chr2 88537429 88537723 -164718860 - AluSc SINE Alu -14 295 1 6041 192 50 23 chr2 88537723 88537772 -164718811 - L1MB8 LINE L1 -1067 5116 5070 222 37 0 0 chr2 88537772 88537799 -164718784 + (TTTTC)n Simple_repeat Simple_repeat 2 28 0 2182 89 3 7 chr2 88537800 88538082 -164718501 - AluSq SINE Alu -32 281 1 6041 192 50 23 chr2 88538082 88538675 -164717908 - L1MB8 LINE L1 -1113 5070 4494 1931 188 58 11 chr2 88538675 88539052 -164717531 + MSTD LTR MaLR 1 395 -1 6041 192 50 23 chr2 88539052 88539396 -164717187 - L1MB8 LINE L1 -1689 4494 4007 2131 93 84 32 chr2 88539396 88539739 -164716844 + THE1B LTR MaLR 4 364 0 6041 192 50 23 chr2 88539739 88539807 -164716776 - L1MB8 LINE L1 -2176 4007 3942 8384 164 15 46 chr2 88541975 88542827 -164713756 + L1PB4 LINE L1 3589 4466 -1837 2069 144 0 3 chr2 88542827 88543133 -164713450 + AluSx SINE Alu 1 305 -7 8384 164 15 46 chr2 88543133 88544348 -164712235 + L1PB4 LINE L1 4466 5581 -722 917 201 0 0 chr2 88544357 88544511 -164712072 - FRAM SINE Alu -22 154 1 2910 181 9 12 chr2 88544512 88545076 -164711507 + L1PB4 LINE L1 5583 6144 -12 186 321 131 0 chr2 88545104 88545188 -164711395 - MIR SINE MIR -75 133 39 417 39 0 0 chr2 88545373 88545424 -164711159 + (CA)n Simple_repeat Simple_repeat 2 52 0 756 268 28 0 chr2 88545478 88545657 -164710926 + MER91B DNA MER1_type 2 185 -5 413 322 41 48 chr2 88545799 88546069 -164710514 - L2 LINE L2 -1482 1832 1565 1589 240 15 54 chr2 88547275 88547316 -164709267 - MLT2B1 LTR ERVL 0 554 513 483 18 0 0 chr2 88547316 88547372 -164709211 + (TG)n Simple_repeat Simple_repeat 1 56 0 1589 240 15 54 chr2 88547372 88547804 -164708779 - MLT2B1 LTR ERVL -41 513 3 474 270 83 18 chr2 88547836 88548209 -164708374 + L1ME3A LINE L1 5241 5659 -511 1241 149 55 18 chr2 88548232 88548489 -164708094 - L1PA16 LINE L1 -255 5911 5695 405 290 36 26 chr2 88548480 88548673 -164707910 + L1ME3A LINE L1 5690 5884 -286 * 616 280 109 40 chr2 88549390 88550143 -164706440 + L1M4 LINE L1 2204 3008 -3138 285 309 32 24 chr2 88550154 88550277 -164706306 + L1MEd LINE L1 52 175 -5944 1696 180 28 3 chr2 88550852 88551136 -164705447 + AluJo SINE Alu 1 291 -21 210 174 0 0 chr2 88551138 88551184 -164705399 + (TA)n Simple_repeat Simple_repeat 1 46 0 483 284 103 8 chr2 88551224 88551576 -164705007 + L1MEd LINE L1 1048 1519 -971 1028 249 117 17 chr2 88551653 88552474 -164704109 + L1MEd LINE L1 2878 4665 -1464 1033 183 44 0 chr2 88552531 88552711 -164703872 + LTR18B LTR ERVL 1 188 -426 946 164 172 27 chr2 88552715 88552971 -164703612 + LTR18B LTR ERVL 322 614 0 5366 223 101 28 chr2 88552987 88554303 -164702280 + L1M4 LINE L1 71 1290 -5354 1696 183 0 23 chr2 88554303 88554604 -164701979 + AluJo SINE Alu 2 295 -17 2116 139 3 0 chr2 88554608 88554911 -164701672 + AluSp SINE Alu 1 304 -9 5366 223 101 28 chr2 88554911 88556672 -164699911 + L1M4 LINE L1 1292 3429 -3215 8950 185 45 16 chr2 88556677 88559588 -164696995 - L1PA16 LINE L1 -3 6220 3230 1196 34 7 0 chr2 88560175 88560322 -164696261 - L1PA5 LINE L1 -544 5610 5463 4417 50 0 2 chr2 88560322 88560856 -164695727 + L1PA5 LINE L1 5611 6151 -3 5877 236 39 7 chr2 88561916 88562106 -164694477 - L1PA16 LINE L1 -2942 3261 3079 1691 156 43 3 chr2 88562106 88562388 -164694195 - AluJb SINE Alu -17 295 3 5877 236 39 7 chr2 88562388 88564538 -164692045 - L1PA16 LINE L1 -3124 3079 797 408 246 51 7 chr2 88564578 88564708 -164691875 + L1ME3A LINE L1 6024 6158 -6 299 247 113 93 chr2 88564719 88564913 -164691670 + L1ME3A LINE L1 5944 6141 -29 204 315 63 9 chr2 88565303 88565414 -164691169 - MIR SINE MIR -55 207 91 207 204 0 0 chr2 88566717 88566761 -164689822 + A-rich Low_complexity Low_complexity 1 44 0 271 178 43 172 chr2 88566793 88566956 -164689627 + MIR3 SINE MIR 64 205 -3 695 227 130 105 chr2 88567239 88567648 -164688935 - L2 LINE L2 -2 3311 2893 366 42 0 0 chr2 88569695 88569743 -164686840 + (TGAA)n Simple_repeat Simple_repeat 2 49 0 1974 169 3 0 chr2 88569745 88570052 -164686531 + AluJb SINE Alu 1 308 -4 709 235 148 5 chr2 88571143 88571339 -164685244 - MIR SINE MIR -21 241 18 183 129 0 0 chr2 88571876 88571907 -164684676 + (TTCTCC)n Simple_repeat Simple_repeat 6 36 0 698 250 29 21 chr2 88571989 88572224 -164684359 + L1MB8 LINE L1 4574 4796 -1350 7651 120 12 3 chr2 88572530 88573655 -164682928 + HSMAR2 DNA Mariner 118 1253 -49 3763 170 65 31 chr2 88573659 88574511 -164682072 + L1MB8 LINE L1 4783 5703 -475 2446 97 0 0 chr2 88574511 88574820 -164681763 + AluSg SINE Alu 1 309 -1 3763 170 65 31 chr2 88574820 88575248 -164681335 + L1MB8 LINE L1 5703 6115 -63 211 234 16 0 chr2 88575248 88575312 -164681271 + (TA)n Simple_repeat Simple_repeat 2 66 0 3155 178 16 13 chr2 88575545 88576156 -164680427 + L1MA10 LINE L1 5709 6321 -13 243 204 0 0 chr2 88576790 88576844 -164679739 + (CA)n Simple_repeat Simple_repeat 1 54 0 7690 18 13 0 chr2 88577523 88578948 -164677635 + L1PA3 LINE L1 4736 6171 0 22 35 0 0 chr2 88579819 88579848 -164676735 + AT_rich Low_complexity Low_complexity 1 29 0 740 195 0 0 chr2 88580318 88580436 -164676147 + FLAM_A SINE Alu 2 119 -14 24 67 0 0 chr2 88580442 88580487 -164676096 + AT_rich Low_complexity Low_complexity 1 45 0 415 355 33 25 chr2 88581855 88582131 -164674452 + L1PA13 LINE L1 162 439 -6348 245 318 68 52 chr2 88582241 88582492 -164674091 + L1M2 LINE L1 704 1561 -5277 2416 112 0 0 chr2 88582577 88582889 -164673694 - AluSx SINE Alu 0 312 1 5807 225 36 44 chr2 88583687 88584412 -164672171 + L1PA13 LINE L1 1380 2109 -4688 3995 16 0 0 chr2 88584412 88584861 -164671722 + L1PA2 LINE L1 5707 6155 0 5807 225 36 44 chr2 88584861 88585203 -164671380 + L1PA13 LINE L1 2109 2452 -4345 2123 130 16 3 chr2 88585203 88585511 -164671072 + AluSx SINE Alu 1 312 0 5807 225 36 44 chr2 88585511 88586812 -164669771 + L1PA13 LINE L1 2452 3792 -3005 1675 148 4 4 chr2 88586790 88587054 -164669529 + L1PA16 LINE L1 6534 6797 -20 * 452 290 155 78 chr2 88587141 88587526 -164669057 + L1ME4a LINE L1 5280 5634 -487 2248 120 3 0 chr2 88587526 88587826 -164668757 + AluSx SINE Alu 1 301 -11 452 290 155 78 chr2 88587826 88588222 -164668361 + L1ME4a LINE L1 5634 6121 0 509 126 11 0 chr2 88588320 88588407 -164668176 - L1MB4 LINE L1 0 6180 6093 1529 190 9 61 chr2 88588407 88588734 -164667849 - AluJo SINE Alu -2 310 1 1766 121 25 4 chr2 88588861 88589141 -164667442 + L1MB1 LINE L1 5882 6167 -1 541 189 254 18 chr2 88589678 88589847 -164666736 - MER3 DNA MER1_type 0 209 1 2580 66 0 0 chr2 88589939 88590244 -164666339 + AluY SINE Alu 1 305 -6 218 279 79 36 chr2 88590665 88590805 -164665778 - L2 LINE L2 -1897 1417 1272 372 94 0 0 chr2 88591722 88591775 -164664808 + (TG)n Simple_repeat Simple_repeat 1 53 0 514 333 11 6 chr2 88592524 88592698 -164663885 + MER5A DNA MER1_type 10 184 -5 878 283 69 38 chr2 88593199 88593620 -164662963 - MLT1J LTR MaLR -31 480 47 2231 114 3 0 chr2 88595180 88595478 -164661105 + AluSx SINE Alu 1 299 -13 21 57 0 0 chr2 88597924 88597959 -164658624 + AT_rich Low_complexity Low_complexity 1 35 0 319 311 25 8 chr2 88597993 88598112 -164658471 + MIR SINE MIR 2 122 -140 212 294 59 0 chr2 88598594 88598662 -164657921 - MER91A DNA MER1_type 0 196 125 2017 114 7 7 chr2 88600043 88600324 -164656259 + AluSq SINE Alu 1 281 -32 207 100 0 0 chr2 88600324 88600354 -164656229 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 341 270 31 95 chr2 88600584 88601032 -164655551 + L1M4c LINE L1 1270 1886 -857 831 144 0 30 chr2 88601088 88601220 -164655363 + FLAM_A SINE Alu 1 128 -5 2494 133 67 5 chr2 88601226 88601631 -164654952 - MSTB1 LTR MaLR 0 432 3 916 187 73 117 chr2 88601771 88601892 -164654691 + L1MC5 LINE L1 7201 7326 -635 1536 117 18 0 chr2 88601892 88602115 -164654468 + AluJo SINE Alu 85 311 -1 916 187 73 117 chr2 88602115 88602378 -164654205 + L1MC5 LINE L1 7326 7568 -393 2115 129 3 7 chr2 88602393 88602687 -164653896 + AluSx SINE Alu 1 293 -19 303 296 132 13 chr2 88602696 88602848 -164653735 - MIR3 SINE MIR -20 188 19 186 304 0 29 chr2 88606385 88606454 -164650129 + L2 LINE L2 2695 2761 -553 201 191 24 0 chr2 88606610 88606652 -164649931 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 185 159 23 0 chr2 88606808 88606852 -164649731 + (CA)n Simple_repeat Simple_repeat 2 46 0 329 361 76 0 chr2 88606856 88607000 -164649583 + L2 LINE L2 3097 3251 -21 970 119 0 0 chr2 88608148 88608282 -164648301 - FRAM SINE Alu -8 168 35 191 243 176 0 chr2 88609097 88609171 -164647412 + L2 LINE L2 3191 3277 -36 188 240 20 20 chr2 88609191 88609241 -164647342 - MIR SINE MIR -57 151 102 2112 157 0 20 chr2 88609282 88609626 -164646957 + MER1B DNA MER1_type 1 337 0 198 214 0 0 chr2 88609722 88609764 -164646819 + L2 LINE L2 3261 3302 -11 219 275 110 11 chr2 88610023 88610114 -164646469 - MIR3 SINE MIR -24 184 85 2162 104 0 7 chr2 88610133 88610433 -164646150 - AluSg1 SINE Alu 0 298 1 234 241 0 0 chr2 88610471 88610529 -164646054 - L1ME4a LINE L1 -1 6120 6063 233 268 165 8 chr2 88610935 88611062 -164645521 + MIR SINE MIR 89 235 -27 2389 182 47 11 chr2 88611191 88611657 -164644926 + MLT1D LTR MaLR 23 505 0 268 266 0 25 chr2 88612836 88612915 -164643668 - MER5B DNA MER1_type -5 173 97 586 79 51 40 chr2 88612965 88613142 -164643441 + (CA)n Simple_repeat Simple_repeat 2 180 0 337 136 68 19 chr2 88613187 88613349 -164643234 + (CA)n Simple_repeat Simple_repeat 2 171 0 219 102 68 17 chr2 88613360 88613419 -164643164 + (CA)n Simple_repeat Simple_repeat 1 62 0 370 123 58 23 chr2 88613430 88613601 -164642982 + (CA)n Simple_repeat Simple_repeat 2 178 0 1763 177 67 21 chr2 88614619 88614992 -164641591 + MLT1B LTR MaLR 1 390 0 235 343 50 21 chr2 88615899 88616039 -164640544 - MIR SINE MIR -80 182 39 225 211 39 0 chr2 88616037 88616089 -164640494 - L2 LINE L2 -262 3051 2998 * 2398 95 0 0 chr2 88616119 88616415 -164640168 + AluSx SINE Alu 1 296 -16 3138 155 47 14 chr2 88618019 88618701 -164637882 - L1MB7 LINE L1 0 6183 5440 1471 217 17 25 chr2 88618703 88618885 -164637698 + L1MCb LINE L1 663 845 -5200 1388 189 45 89 chr2 88618885 88619019 -164637564 - MLT1A1 LTR MaLR 0 365 227 1913 157 0 17 chr2 88619019 88619318 -164637265 - AluJb SINE Alu -18 294 1 1388 189 45 89 chr2 88619318 88619565 -164637018 - MLT1A1 LTR MaLR -138 227 1 1471 217 17 25 chr2 88619565 88619787 -164636796 + L1MCb LINE L1 845 1064 -4981 418 213 8 16 chr2 88619769 88619891 -164636692 + L1MCb LINE L1 3007 3127 -3437 * 6679 224 42 29 chr2 88619892 88620588 -164635995 - L1M4c LINE L1 -4725 1921 1235 2277 127 0 0 chr2 88620588 88620895 -164635688 - AluSq SINE Alu -6 307 1 6679 224 42 29 chr2 88620895 88622062 -164634521 - L1M4c LINE L1 -5411 1235 15 246 279 252 9 chr2 88622076 88622187 -164634396 - MIR3 SINE MIR -54 154 17 208 338 154 17 chr2 88625761 88625995 -164630588 + L3 LINE CR1 1005 1270 -307 523 213 7 50 chr2 88626103 88626132 -164630451 + MER103 DNA DNA 22 51 -115 1563 138 13 0 chr2 88626132 88626357 -164630226 + AluSg/x SINE Alu 84 311 -1 523 213 7 50 chr2 88626357 88626468 -164630115 + MER103 DNA DNA 51 156 -10 1221 141 117 144 chr2 88627093 88627468 -164629115 - MLT1A1 LTR MaLR 0 365 1 2709 90 28 0 chr2 88627766 88628120 -164628463 + THE1B LTR MaLR 1 364 0 2318 106 0 3 chr2 88628670 88628972 -164627611 + AluSx SINE Alu 1 301 -11 428 200 171 9 chr2 88629389 88629494 -164627089 - L2 LINE L2 0 3313 3192 1854 204 107 23 chr2 88631336 88631767 -164624816 - MLT1C LTR MaLR 0 467 1 648 97 0 0 chr2 88631930 88632023 -164624560 + (TAGA)n Simple_repeat Simple_repeat 3 95 0 190 57 94 0 chr2 88632118 88632171 -164624412 + (TA)n Simple_repeat Simple_repeat 1 58 0 1958 129 7 0 chr2 88632195 88632467 -164624116 - AluSx SINE Alu -30 282 9 193 225 0 0 chr2 88633220 88633260 -164623323 + MER5B DNA MER1_type 137 176 -2 201 167 0 0 chr2 88633912 88633948 -164622635 + (TAA)n Simple_repeat Simple_repeat 3 38 0 216 0 0 0 chr2 88634607 88634631 -164621952 + (TCCTG)n Simple_repeat Simple_repeat 5 28 0 264 306 161 16 chr2 88635031 88635224 -164621359 - L3 LINE CR1 -31 1546 1326 350 233 142 42 chr2 88635372 88635492 -164621091 + L3 LINE CR1 1414 1545 -32 1115 157 89 122 chr2 88636582 88636832 -164619751 + MLT1C LTR MaLR 1 235 -232 2792 94 11 3 chr2 88636832 88637204 -164619379 - THE1C LTR MaLR 0 375 1 1115 157 89 122 chr2 88637204 88637348 -164619235 + MLT1C LTR MaLR 235 382 -85 2057 106 29 0 chr2 88637352 88637626 -164618957 + AluSg SINE Alu 5 286 -24 204 115 39 19 chr2 88637626 88637678 -164618905 + (TA)n Simple_repeat Simple_repeat 2 54 0 23 33 0 0 chr2 88637681 88637711 -164618872 + AT_rich Low_complexity Low_complexity 1 30 0 1240 130 14 10 chr2 88637712 88637920 -164618663 - MER2 DNA MER2_type -136 209 1 585 290 52 5 chr2 88638000 88638193 -164618390 - MIR SINE MIR -48 214 13 1435 182 101 43 chr2 88640424 88640792 -164615791 + MLT1B LTR MaLR 2 390 0 1877 167 3 23 chr2 88641474 88641780 -164614803 - AluJo SINE Alu -12 300 1 302 296 0 0 chr2 88642355 88642426 -164614157 + tRNA-Val-GTG tRNA tRNA 3 73 -3 705 208 8 0 chr2 88642447 88642577 -164614006 + FLAM_C SINE Alu 1 131 -2 213 256 132 62 chr2 88642925 88643054 -164613529 - L2 LINE L2 -7 3306 3169 986 177 21 5 chr2 88643270 88643456 -164613127 - MER5A DNA MER1_type 0 189 1 484 82 47 71 chr2 88643522 88643607 -164612976 - AluJo SINE Alu -169 143 61 1887 150 75 32 chr2 88643818 88644192 -164612391 + MLT1B LTR MaLR 1 390 0 2638 102 7 46 chr2 88644742 88645175 -164611408 - MER1A DNA MER1_type -17 512 97 2545 34 41 0 chr2 88646841 88647133 -164609450 - AluY SINE Alu -7 304 1 1982 78 0 0 chr2 88647201 88647445 -164609138 - AluY SINE Alu 0 311 68 2064 148 159 5 chr2 88647718 88648109 -164608474 + LTR32 LTR ERVL 21 471 0 216 226 108 43 chr2 88648111 88648204 -164608379 + MIR SINE MIR 18 116 -92 656 226 110 94 chr2 88649725 88650044 -164606539 - MER102b DNA MER1_type -17 324 1 336 301 36 1 chr2 88650297 88650404 -164606179 - MIR SINE MIR -62 146 77 1916 138 62 0 chr2 88650404 88650680 -164605903 + AluSx SINE Alu 1 293 -19 6122 44 5 1 chr2 88650955 88652069 -164604514 + L1PA5 LINE L1 4904 6023 -131 411 145 0 0 chr2 88652097 88652166 -164604417 + (TTAA)n Simple_repeat Simple_repeat 4 72 0 799 113 0 0 chr2 88652169 88652284 -164604299 + L1PA5 LINE L1 6040 6154 0 2186 109 20 0 chr2 88653299 88653593 -164602990 + AluSx SINE Alu 1 300 -12 572 206 20 0 chr2 88654599 88654701 -164601882 - MER5B DNA MER1_type -7 171 68 773 204 11 66 chr2 88654965 88655087 -164601496 + MER5B DNA MER1_type 1 111 -67 2329 84 3 17 chr2 88655087 88655385 -164601198 - AluSg SINE Alu -16 294 1 773 204 11 66 chr2 88655385 88655443 -164601140 + MER5B DNA MER1_type 111 171 -7 1876 178 34 0 chr2 88655829 88656127 -164600456 + AluJb SINE Alu 1 308 -4 201 74 0 0 chr2 88656137 88656164 -164600419 + (GGGA)n Simple_repeat Simple_repeat 3 29 0 825 226 90 0 chr2 88656257 88656434 -164600149 + MER82 DNA MER2_type 1 193 -460 2234 109 3 3 chr2 88656434 88656736 -164599847 + AluSx SINE Alu 1 302 -10 2122 108 20 16 chr2 88656740 88657046 -164599537 + AluSx SINE Alu 1 307 -5 384 158 24 49 chr2 88657993 88658075 -164598508 - L2 LINE L2 -7 3306 3227 2466 276 127 29 chr2 88658741 88659335 -164597248 - L2 LINE L2 -189 3124 2589 1864 148 59 7 chr2 88659335 88659625 -164596958 + AluJo SINE Alu 7 311 -1 2466 276 127 29 chr2 88659625 88660198 -164596385 - L2 LINE L2 -724 2589 1849 201 279 0 0 chr2 88660217 88660260 -164596323 - MIR SINE MIR -212 50 8 197 260 100 100 chr2 88660518 88660618 -164595965 + L2 LINE L2 3173 3272 0 911 228 0 0 chr2 88661052 88661232 -164595351 + FRAM SINE Alu 1 172 -4 1233 253 68 11 chr2 88661487 88661846 -164594737 - L2 LINE L2 -5 3308 2926 2250 104 0 13 chr2 88661846 88662144 -164594439 + AluSg SINE Alu 1 294 -16 1097 156 76 0 chr2 88662520 88662731 -164593852 + Charlie1 DNA MER1_type 1 227 -2534 283 149 11 138 chr2 88662745 88662784 -164593799 + Charlie1 DNA MER1_type 2673 2697 -64 1716 151 17 7 chr2 88662784 88663082 -164593501 - AluJb SINE Alu -11 301 1 283 149 11 138 chr2 88663082 88663129 -164593454 + Charlie1 DNA MER1_type 2697 2748 -13 236 261 14 14 chr2 88663841 88663910 -164592673 + MIR SINE MIR 79 147 -115 294 311 34 17 chr2 88663962 88664081 -164592502 + MIR3 SINE MIR 71 191 -17 24 32 0 0 chr2 88664715 88664746 -164591837 + GC_rich Low_complexity Low_complexity 1 31 0 212 284 86 25 chr2 88665228 88665309 -164591274 + MIR SINE MIR 153 238 -24 421 152 0 0 chr2 88665965 88666031 -164590552 + AluJ/FRAM SINE Alu 217 282 -30 240 35 0 0 chr2 88666037 88666066 -164590517 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1454 188 50 85 chr2 88666204 88666550 -164590033 - L1M4 LINE L1 -2954 3192 2832 270 29 0 0 chr2 88666550 88666584 -164589999 + HSMAR1 DNA Mariner 1 34 -1253 1454 188 50 85 chr2 88666584 88666692 -164589891 - L1M4 LINE L1 -3314 2832 2722 207 71 24 48 chr2 88666772 88666814 -164589769 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 1523 175 166 6 chr2 88667252 88667590 -164588993 - MSTD LTR MaLR -4 392 1 614 243 65 27 chr2 88667893 88668078 -164588505 + MLT1E LTR MaLR 20 211 -382 566 129 21 0 chr2 88668092 88668185 -164588398 + MSTD LTR MaLR 298 392 -4 1421 190 15 26 chr2 88668293 88668562 -164588021 + MLT1E LTR MaLR 328 593 0 1955 181 25 11 chr2 88668853 88669213 -164587370 + MER90 LTR ERV1 1 365 -249 2103 161 15 38 chr2 88669221 88669395 -164587188 + MLT1B LTR MaLR 7 183 -207 1496 188 7 20 chr2 88669395 88669698 -164586885 + AluJo SINE Alu 2 300 -12 2103 161 15 38 chr2 88669698 88669853 -164586730 + MLT1B LTR MaLR 183 328 -62 2215 104 0 0 chr2 88669853 88670151 -164586432 + AluSx SINE Alu 1 298 -14 2103 161 15 38 chr2 88670151 88670212 -164586371 + MLT1B LTR MaLR 328 389 -1 703 151 24 0 chr2 88670212 88670337 -164586246 + MER90 LTR ERV1 393 520 -94 516 181 0 0 chr2 88670382 88670465 -164586118 + MER90 LTR ERV1 530 612 -2 2081 115 0 3 chr2 88671224 88671519 -164585064 + AluSx SINE Alu 1 294 -18 185 277 98 89 chr2 88671571 88671644 -164584939 - L2 LINE L2 0 3272 3196 2216 106 0 0 chr2 88671644 88671946 -164584637 + AluSx SINE Alu 1 302 -10 185 277 98 89 chr2 88671946 88671984 -164584599 - L2 LINE L2 -76 3196 3160 740 226 13 13 chr2 88672006 88672161 -164584422 + MER5B DNA MER1_type 17 171 -7 460 326 151 25 chr2 88672157 88672757 -164583826 - L2 LINE L2 -126 3146 2472 * 701 273 16 26 chr2 88673091 88673285 -164583298 + MIR SINE MIR 17 208 -54 282 342 0 0 chr2 88673403 88673488 -164583095 + polypurine Low_complexity Low_complexity 1 85 0 750 105 26 0 chr2 88673554 88673668 -164582915 + L1MB3 LINE L1 6060 6176 -7 225 141 172 0 chr2 88673689 88673753 -164582830 + L1MC/D LINE L1 5414 5488 -2320 1962 112 3 3 chr2 88673825 88674112 -164582471 - AluSx SINE Alu -25 287 1 26 0 0 0 chr2 88674423 88674449 -164582134 + AT_rich Low_complexity Low_complexity 1 26 0 1919 108 3 10 chr2 88674457 88674745 -164581838 + AluSx SINE Alu 1 286 -26 273 57 0 0 chr2 88674745 88674780 -164581803 + (CATA)n Simple_repeat Simple_repeat 2 36 0 470 269 67 0 chr2 88675802 88675921 -164580662 - MIR SINE MIR -134 128 2 25 0 0 0 chr2 88676008 88676033 -164580550 + AT_rich Low_complexity Low_complexity 1 25 0 350 223 32 53 chr2 88676033 88676127 -164580456 - L1MC4 LINE L1 -1339 6703 6612 305 272 10 68 chr2 88676038 88676141 -164580442 + L1MC3 LINE L1 6550 6646 -1139 * 210 49 98 0 chr2 88676144 88676205 -164580378 + (TA)n Simple_repeat Simple_repeat 1 67 0 404 260 297 55 chr2 88676590 88677401 -164579182 - L2 LINE L2 -576 2738 1732 183 318 0 0 chr2 88677400 88677444 -164579139 + L2 LINE L2 3243 3286 -27 * 295 312 136 30 chr2 88677450 88677649 -164578934 - L2 LINE L2 0 3313 3094 594 191 8 56 chr2 88677652 88677778 -164578805 + FLAM_C SINE Alu 9 128 -15 364 340 92 0 chr2 88678853 88678994 -164577589 + MIR SINE MIR 66 219 -43 281 109 174 0 chr2 88679837 88679883 -164576700 + AluJb SINE Alu 85 138 -164 1610 91 0 0 chr2 88679883 88680092 -164576491 + AluSg1 SINE Alu 1 209 -100 1138 194 5 0 chr2 88680096 88680307 -164576276 + AluJb SINE Alu 85 296 -16 617 196 139 12 chr2 88680529 88680702 -164575881 + L1MD3 LINE L1 7791 7985 -10 * 630 239 92 33 chr2 88680694 88680878 -164575705 + L1ME1 LINE L1 5934 6128 -38 2129 99 0 3 chr2 88680880 88681184 -164575399 - AluSx SINE Alu -9 303 1 751 158 163 10 chr2 88681264 88681466 -164575117 + Charlie1 DNA MER1_type 2378 2610 -151 216 0 0 0 chr2 88681473 88681497 -164575086 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1089 157 11 11 chr2 88681501 88681686 -164574897 - AluSg/x SINE Alu -37 272 88 1013 161 0 6 chr2 88682301 88682469 -164574114 - AluSg/x SINE Alu -10 302 136 2199 89 14 0 chr2 88682471 88682764 -164573819 - AluSc SINE Alu -12 297 1 1353 168 17 62 chr2 88682844 88683291 -164573292 - MER4B-int LTR ERV1 -4466 2292 1678 235 0 0 54 chr2 88683294 88683331 -164573252 + (TCCC)n Simple_repeat Simple_repeat 2 36 0 1733 169 0 19 chr2 88683331 88683644 -164572939 - AluSg SINE Alu -3 307 1 837 210 171 4 chr2 88683644 88683989 -164572594 - MLT2B1 LTR ERVL -55 465 1 1993 138 0 3 chr2 88684015 88684311 -164572272 + AluSx SINE Alu 1 297 -15 198 0 0 0 chr2 88684311 88684333 -164572250 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 1626 136 9 97 chr2 88684348 88684499 -164572084 + AluJo SINE Alu 1 107 -205 180 0 0 0 chr2 88684499 88684519 -164572064 + (CAAAA)n Simple_repeat Simple_repeat 5 24 0 1626 136 9 97 chr2 88684519 88684706 -164571877 + AluJo SINE Alu 107 309 -3 330 314 129 0 chr2 88684745 88684939 -164571644 + MER20B DNA MER1_type 281 499 -284 2085 76 43 0 chr2 88685051 88685328 -164571255 + AluY SINE Alu 1 289 -22 21 36 0 0 chr2 88685993 88686021 -164570562 + AT_rich Low_complexity Low_complexity 1 28 0 2087 88 0 7 chr2 88686023 88686306 -164570277 + AluSg SINE Alu 1 281 -29 365 105 0 14 chr2 88686310 88686373 -164570210 + Alu SINE Alu 1 44 -259 266 88 0 0 chr2 88686375 88686409 -164570174 + Alu SINE Alu 246 279 -21 702 203 0 0 chr2 88686411 88686559 -164570024 + (TAGA)n Simple_repeat Simple_repeat 3 150 0 1841 126 0 38 chr2 88686562 88686905 -164569678 + AluSx SINE Alu 1 332 0 336 200 168 26 chr2 88686921 88687076 -164569507 - MER112 DNA MER1_type -42 218 42 2109 97 0 10 chr2 88687079 88687390 -164569193 + AluSq SINE Alu 1 308 0 2067 122 3 10 chr2 88687401 88687713 -164568870 + AluSx SINE Alu 1 310 -2 773 223 16 16 chr2 88687818 88688011 -164568572 - MER82 DNA MER2_type -437 216 24 1994 102 38 7 chr2 88688013 88688306 -164568277 + AluSx SINE Alu 1 302 -10 2044 91 37 3 chr2 88688949 88689247 -164567336 - AluSp SINE Alu -5 308 1 2419 65 3 0 chr2 88689476 88689782 -164566801 + AluY SINE Alu 1 307 -4 1749 127 98 0 chr2 88689826 88690102 -164566481 + AluSx SINE Alu 1 303 -9 193 243 122 112 chr2 88690828 88690935 -164565648 - L2 LINE L2 -18 3295 3188 184 178 89 0 chr2 88690978 88691023 -164565560 - MIR SINE MIR -57 205 157 227 184 20 0 chr2 88691467 88691516 -164565067 + L2 LINE L2 3263 3312 -1 838 56 0 0 chr2 88691615 88691722 -164564861 - AluSg/x SINE Alu -7 303 197 686 122 0 10 chr2 88691950 88692048 -164564535 + FLAM_C SINE Alu 33 129 -14 264 122 0 0 chr2 88692048 88692089 -164564494 + (CACG)n Simple_repeat Simple_repeat 1 41 0 347 247 0 12 chr2 88692309 88692394 -164564189 - MIR SINE MIR -122 140 57 2191 98 0 0 chr2 88692979 88693274 -164563309 - AluSg SINE Alu -15 295 1 256 267 78 0 chr2 88694116 88694206 -164562377 - L2 LINE L2 -934 2380 2284 321 193 171 71 chr2 88694750 88694803 -164561780 + LTR50 LTR ERVL 4 50 -745 804 217 94 20 chr2 88694803 88695006 -164561577 + MER20 DNA MER1_type 2 219 0 321 193 171 71 chr2 88695006 88695092 -164561491 + LTR50 LTR ERVL 50 157 -638 221 75 25 0 chr2 88695338 88695378 -164561205 + (TATAA)n Simple_repeat Simple_repeat 5 45 0 606 255 51 36 chr2 88695734 88696090 -164560493 + LTR16A LTR ERVL 22 445 -5 1591 155 30 30 chr2 88697123 88697427 -164559156 + AluJb SINE Alu 1 304 -8 339 274 53 0 chr2 88697908 88698003 -164558580 - MER112 DNA MER1_type -6 254 155 2014 199 69 49 chr2 88698013 88698642 -164557941 + L1MD2 LINE L1 5394 6017 -225 1795 134 48 0 chr2 88698642 88698934 -164557649 + AluSx SINE Alu 1 306 -6 2014 199 69 49 chr2 88698934 88699151 -164557432 + L1MD2 LINE L1 6017 6228 -14 464 259 0 7 chr2 88699156 88699291 -164557292 - MER112 DNA MER1_type -86 174 41 247 268 0 0 chr2 88699370 88699426 -164557157 - Charlie8 DNA MER1_type -1001 1416 1361 667 220 144 104 chr2 88699501 88699595 -164556988 - Charlie8 DNA MER1_type -1949 468 379 1262 154 53 0 chr2 88699595 88699822 -164556761 - L1MB3 LINE L1 0 6183 5945 667 220 144 104 chr2 88699822 88699840 -164556743 - Charlie8 DNA MER1_type -2038 379 363 1866 196 93 63 chr2 88699840 88700366 -164556217 - MLT1F LTR MaLR 0 542 1 667 220 144 104 chr2 88700366 88700392 -164556191 - Charlie8 DNA MER1_type -2054 363 339 2315 87 0 0 chr2 88700392 88700690 -164555893 + AluSx SINE Alu 1 298 -14 667 220 144 104 chr2 88700690 88700999 -164555584 - Charlie8 DNA MER1_type -2077 340 1 520 294 87 35 chr2 88701025 88701256 -164555327 + MIR SINE MIR 13 255 -7 359 175 0 32 chr2 88701780 88701843 -164554740 - L3 LINE CR1 -113 1464 1404 843 304 97 32 chr2 88701893 88702265 -164554318 - L2 LINE L2 0 3313 2918 329 326 8 23 chr2 88702492 88702621 -164553962 - L3 LINE CR1 -874 703 577 202 389 0 0 chr2 88702890 88702962 -164553621 + L2 LINE L2 3242 3313 0 1213 241 207 14 chr2 88703050 88703500 -164553083 - MLT1G1 LTR MaLR 0 595 5 1558 223 72 42 chr2 88703961 88704330 -164552253 + MLT1J2 LTR MaLR 1 386 -64 2173 101 3 0 chr2 88704330 88704628 -164551955 + AluSx SINE Alu 6 304 -8 1558 223 72 42 chr2 88704628 88704688 -164551895 + MLT1J2 LTR MaLR 386 443 -7 284 194 60 127 chr2 88704943 88705077 -164551506 + MLT1H LTR MaLR 425 549 0 2303 91 3 0 chr2 88705134 88705442 -164551141 + AluSx SINE Alu 1 309 -3 232 141 313 0 chr2 88705442 88705506 -164551077 + AluJ/FRAM SINE Alu 219 302 0 248 140 240 0 chr2 88705556 88705606 -164550977 - MIR SINE MIR -119 143 82 1730 157 3 10 chr2 88705677 88705982 -164550601 + AluJb SINE Alu 1 303 -9 21 0 0 0 chr2 88707054 88707075 -164549508 + GC_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 88707176 88707198 -164549385 + GC_rich Low_complexity Low_complexity 1 22 0 234 265 48 60 chr2 88709002 88709085 -164547498 - L2 LINE L2 -53 3219 3138 1245 81 17 0 chr2 88709226 88709399 -164547184 - AluSp SINE Alu -9 304 129 2155 81 32 26 chr2 88709402 88709712 -164546871 - AluSp SINE Alu -1 312 1 512 222 15 15 chr2 88710638 88710907 -164545676 + (CCA)n Simple_repeat Simple_repeat 1 269 0 657 203 17 0 chr2 88710922 88711099 -164545484 + (CCA)n Simple_repeat Simple_repeat 1 180 0 579 229 17 0 chr2 88711137 88711312 -164545271 + (CCA)n Simple_repeat Simple_repeat 2 179 0 1638 95 16 20 chr2 88711469 88711721 -164544862 + AluSx SINE Alu 45 295 -17 752 234 124 14 chr2 88711733 88711942 -164544641 - MIR SINE MIR -19 243 12 275 340 0 43 chr2 88712101 88712195 -164544388 + MIR SINE MIR 37 126 -82 1337 264 105 30 chr2 88712617 88713190 -164543393 + L2 LINE L2 2287 2902 -412 361 175 25 0 chr2 88713214 88713294 -164543289 + L2 LINE L2 3011 3092 -221 787 130 0 53 chr2 88713315 88713446 -164543137 - FLAM_C SINE Alu -11 132 9 345 301 128 30 chr2 88713447 88713650 -164542933 + L2 LINE L2 3091 3313 0 183 318 0 0 chr2 88713656 88713700 -164542883 - L2 LINE L2 -27 3286 3243 * 402 261 297 55 chr2 88713699 88714511 -164542072 + L2 LINE L2 1732 2739 -575 218 274 65 0 chr2 88714801 88714863 -164541720 + L2 LINE L2 3244 3309 -4 1321 239 65 7 chr2 88714872 88715182 -164541401 + MER58B DNA MER1_type 1 328 -13 426 282 23 30 chr2 88715209 88715340 -164541243 + MIR SINE MIR 22 151 -111 1038 223 47 0 chr2 88715438 88715649 -164540934 + MIR SINE MIR 35 255 -7 2247 65 3 39 chr2 88715735 88716041 -164540542 - AluSp SINE Alu -17 296 2 243 323 125 26 chr2 88716211 88716514 -164540069 + L2 LINE L2 2149 2481 -833 235 282 113 48 chr2 88716879 88717003 -164539580 - MIR SINE MIR -11 251 120 2171 83 0 20 chr2 88717083 88717385 -164539198 - AluSg SINE Alu -14 296 1 196 301 40 96 chr2 88717432 88717631 -164538952 + L2 LINE L2 2867 3054 -218 545 262 78 10 chr2 88717865 88718071 -164538512 - MER112 DNA MER1_type -2 258 39 2155 99 0 0 chr2 88718140 88718432 -164538151 - AluSg SINE Alu -18 292 1 622 281 114 20 chr2 88718692 88718996 -164537587 + L2 LINE L2 2750 3082 -231 737 182 30 0 chr2 88718997 88719129 -164537454 + AluJo SINE Alu 2 137 -175 1957 98 14 21 chr2 88719132 88719442 -164537141 - AluSp SINE Alu 0 308 1 23 33 0 0 chr2 88719455 88719485 -164537098 + AT_rich Low_complexity Low_complexity 1 30 0 840 163 0 0 chr2 88719580 88719709 -164536874 + FLAM_C SINE Alu 1 129 -14 599 176 130 0 chr2 88719773 88719881 -164536702 - AluJb SINE Alu -189 123 2 218 219 0 0 chr2 88719882 88719923 -164536660 - L2 LINE L2 -231 3082 3042 746 180 118 35 chr2 88719972 88720038 -164536545 + Charlie5 DNA MER1_type 2345 2404 -220 1432 206 10 14 chr2 88720038 88720170 -164536413 + AluJo SINE Alu 1 132 -180 2146 117 0 9 chr2 88720170 88720486 -164536097 + AluSq SINE Alu 1 313 0 1432 206 10 14 chr2 88720486 88720649 -164535934 + AluJo SINE Alu 132 295 -17 746 180 118 35 chr2 88720649 88720837 -164535746 + Charlie5 DNA MER1_type 2404 2620 -4 2229 79 23 0 chr2 88721283 88721588 -164534995 + AluSx SINE Alu 1 312 0 1822 127 0 14 chr2 88721899 88722215 -164534368 + AluSx SINE Alu 2 313 0 2468 54 0 0 chr2 88722492 88722789 -164533794 + AluY SINE Alu 1 297 -14 1689 187 3 0 chr2 88723040 88723339 -164533244 + AluJo SINE Alu 1 300 -12 2173 69 7 36 chr2 88723849 88724154 -164532429 + AluSp SINE Alu 1 296 -17 22 0 0 0 chr2 88724291 88724313 -164532270 + AT_rich Low_complexity Low_complexity 1 22 0 2032 102 24 3 chr2 88724442 88724735 -164531848 - AluSq SINE Alu -14 299 1 1931 120 10 10 chr2 88724836 88724969 -164531614 + AluSx SINE Alu 1 133 -179 2160 93 10 0 chr2 88724969 88725269 -164531314 + AluSp SINE Alu 1 303 -10 1931 120 10 10 chr2 88725269 88725426 -164531157 + AluSx SINE Alu 132 291 -21 310 43 0 0 chr2 88725433 88725480 -164531103 + L1PA2 LINE L1 6106 6152 -3 2034 100 35 0 chr2 88725685 88725975 -164530608 + AluSp SINE Alu 1 300 -13 1277 200 57 11 chr2 88726262 88726542 -164530041 + AluJb SINE Alu 2 294 -8 695 185 7 55 chr2 88726795 88726941 -164529642 + AluSg/x SINE Alu 128 266 -44 23 0 0 0 chr2 88726943 88726966 -164529617 + AT_rich Low_complexity Low_complexity 1 23 0 480 89 51 0 chr2 88727033 88727112 -164529471 + L1MA8 LINE L1 6206 6288 -3 277 196 0 0 chr2 88727368 88727419 -164529164 - AluYb8 SINE Alu -123 185 135 2005 127 3 0 chr2 88727477 88727777 -164528806 + AluSx SINE Alu 2 302 -10 849 89 0 0 chr2 88728729 88728841 -164527742 - AluSg/x SINE Alu -19 290 179 777 169 16 173 chr2 88728855 88728975 -164527608 + MER58 DNA MER1_type 35 96 -2324 2261 80 3 10 chr2 88728975 88729287 -164527296 + AluSg SINE Alu 1 310 0 777 169 16 173 chr2 88729287 88729420 -164527163 + MER58 DNA MER1_type 96 248 -2172 289 254 0 0 chr2 88729415 88729478 -164527105 + MER58 DNA MER1_type 2356 2418 -2 * 2265 100 3 0 chr2 88729851 88730161 -164526422 + AluSx SINE Alu 1 311 -1 317 299 172 0 chr2 88730543 88730747 -164525836 + L3b LINE CR1 1244 1482 -101 855 142 0 62 chr2 88732345 88732507 -164524076 + AluSg/x SINE Alu 125 276 -36 468 0 0 0 chr2 88732507 88732559 -164524024 + (TAAAA)n Simple_repeat Simple_repeat 5 56 0 1568 189 17 0 chr2 88732561 88732857 -164523726 + AluJb SINE Alu 2 302 -10 1911 125 3 7 chr2 88732878 88733166 -164523417 + AluSx SINE Alu 1 287 -25 301 45 0 0 chr2 88733179 88733223 -164523360 + L1MB4 LINE L1 6137 6180 0 2321 80 3 6 chr2 88733230 88733542 -164523041 + AluSp SINE Alu 1 311 -2 1879 124 0 4 chr2 88733550 88733824 -164522759 + AluSx SINE Alu 1 273 -39 3090 241 19 28 chr2 88733824 88734711 -164521872 + L1MEc LINE L1 2179 3023 -3192 2048 124 3 0 chr2 88734711 88735009 -164521574 + AluSx SINE Alu 1 299 -13 3090 241 19 28 chr2 88735009 88735115 -164521468 + L1MEc LINE L1 3023 3128 -3087 2106 108 0 3 chr2 88735115 88735410 -164521173 + AluSg SINE Alu 1 294 -16 325 286 63 40 chr2 88735419 88735545 -164521038 + L1MEc LINE L1 3566 3694 -2521 252 196 39 0 chr2 88735552 88735603 -164520980 + MER74B LTR ERVL 1 53 -569 1599 266 25 5 chr2 88735637 88736043 -164520540 + MER74B LTR ERVL 209 622 0 2518 186 16 26 chr2 88736043 88736590 -164519993 + L1MEc LINE L1 3690 4231 -1984 1679 169 19 3 chr2 88736598 88736905 -164519678 + AluJb SINE Alu 1 312 0 907 184 0 0 chr2 88736907 88737059 -164519524 + AluJb SINE Alu 129 280 -32 207 0 0 0 chr2 88737064 88737087 -164519496 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2328 208 88 83 chr2 88737087 88737309 -164519274 + L1MEc LINE L1 4220 4439 -1776 1989 129 3 3 chr2 88737309 88737618 -164518965 - AluSx SINE Alu -3 309 1 2328 208 88 83 chr2 88737618 88738187 -164518396 + L1MEc LINE L1 4439 5019 -1196 2062 119 10 0 chr2 88738187 88738489 -164518094 + AluSp SINE Alu 1 305 -8 2328 208 88 83 chr2 88738489 88738591 -164517992 + L1MEc LINE L1 5019 5119 -1096 1702 168 28 0 chr2 88738591 88738882 -164517701 + AluJb SINE Alu 1 299 -13 839 180 78 0 chr2 88738882 88739049 -164517534 + L1MC2 LINE L1 6124 6303 -41 2201 111 0 0 chr2 88739077 88739383 -164517200 + AluSx SINE Alu 1 306 -6 2146 107 3 0 chr2 88739433 88739731 -164516852 + AluSp SINE Alu 1 299 -14 752 136 0 8 chr2 88739914 88740032 -164516551 + FLAM_A SINE Alu 10 126 -16 1938 148 0 3 chr2 88740034 88740332 -164516251 + AluSx SINE Alu 1 297 -15 1808 176 0 0 chr2 88740334 88740629 -164515954 + AluJo SINE Alu 3 297 -15 2075 94 31 0 chr2 88740741 88741028 -164515555 + AluSq SINE Alu 1 296 -17 1880 138 14 3 chr2 88741224 88741521 -164515062 + AluSx SINE Alu 5 304 -8 2179 84 20 7 chr2 88741580 88741876 -164514707 + AluSg SINE Alu 1 300 -10 2254 102 0 3 chr2 88741886 88742200 -164514383 + AluSq SINE Alu 1 313 0 1417 140 136 4 chr2 88742337 88742601 -164513982 + AluJo SINE Alu 1 299 -13 2210 80 33 3 chr2 88742893 88743194 -164513389 - AluSq SINE Alu -3 310 1 773 196 0 0 chr2 88744320 88744453 -164512130 + FLAM_C SINE Alu 1 133 0 1346 88 62 0 chr2 88744485 88744705 -164511878 + AluSg/x SINE Alu 85 316 0 921 241 136 28 chr2 88744855 88745253 -164511330 - L1MC4a LINE L1 -1849 5959 5519 202 310 49 84 chr2 88745376 88745493 -164511090 + L2 LINE L2 3117 3226 -87 1940 140 3 0 chr2 88745493 88745793 -164510790 + AluJb SINE Alu 7 307 -5 202 310 49 84 chr2 88745793 88745878 -164510705 + L2 LINE L2 3226 3312 -1 1943 130 0 3 chr2 88745893 88746186 -164510397 + AluSx SINE Alu 5 296 -16 210 167 24 0 chr2 88746516 88746558 -164510025 - L2 LINE L2 -15 3298 3256 377 316 73 61 chr2 88746672 88746826 -164509757 + MLT1K LTR MaLR 190 341 -247 2072 100 7 3 chr2 88746826 88747116 -164509467 - AluSx SINE Alu -21 291 1 377 316 73 61 chr2 88747116 88747274 -164509309 + MLT1K LTR MaLR 341 506 -82 1952 99 7 11 chr2 88747627 88747911 -164508672 + AluSx SINE Alu 1 283 -29 1858 114 54 0 chr2 88748016 88748296 -164508287 - AluSp SINE Alu -17 296 2 3291 226 53 12 chr2 88748348 88749117 -164507466 + MER21B LTR ERV1 9 809 -54 287 296 11 34 chr2 88749289 88749377 -164507206 - L2 LINE L2 0 3272 3187 2248 110 3 0 chr2 88749466 88749774 -164506809 + AluSg SINE Alu 2 310 0 1123 133 0 22 chr2 88749867 88750047 -164506536 - FRAM SINE Alu -4 172 1 537 80 40 20 chr2 88750122 88750222 -164506361 + G-rich Low_complexity Low_complexity 4 105 0 306 350 22 15 chr2 88750509 88750646 -164505937 + L2 LINE L2 2919 3056 -216 1706 139 6 50 chr2 88751204 88751521 -164505062 + AluJo SINE Alu 1 303 -9 812 146 0 53 chr2 88751738 88751889 -164504694 - FLAM_C SINE Alu 0 143 1 2211 102 3 13 chr2 88751904 88752219 -164504364 - AluSx SINE Alu 0 312 1 2140 84 0 11 chr2 88752230 88752550 -164504033 - AluSx SINE Alu 0 317 1 249 98 0 0 chr2 88752563 88752604 -164503979 + (A)n Simple_repeat Simple_repeat 1 41 0 294 163 20 59 chr2 88752753 88752906 -164503677 + (CACCAT)n Simple_repeat Simple_repeat 3 149 0 689 199 6 0 chr2 88752962 88753123 -164503460 + (CCA)n Simple_repeat Simple_repeat 1 162 0 578 241 44 57 chr2 88753295 88753453 -164503130 + MER20B DNA MER1_type 39 194 -589 2091 105 7 0 chr2 88753490 88753786 -164502797 + AluSx SINE Alu 1 298 -14 322 188 78 0 chr2 88753795 88753859 -164502724 - L1ME3A LINE L1 -25 6145 6077 244 184 218 0 chr2 88753856 88753943 -164502640 - L1ME3A LINE L1 -141 6021 5916 * 589 281 21 46 chr2 88754002 88754283 -164502300 + MER20B DNA MER1_type 291 564 -219 742 275 35 10 chr2 88754287 88754487 -164502096 - MLT1I LTR MaLR 0 409 205 756 143 79 39 chr2 88754630 88754833 -164501750 + MER20B DNA MER1_type 573 783 0 634 294 41 0 chr2 88755016 88755213 -164501370 + MLT1L LTR MaLR 404 608 -7 2446 48 3 0 chr2 88755260 88755555 -164501028 + AluY SINE Alu 4 299 -12 468 256 79 59 chr2 88755631 88755834 -164500749 + MER63A DNA MER1_type 4 210 0 294 286 48 0 chr2 88756390 88756474 -164500109 - L2 LINE L2 -1 3271 3184 2033 92 46 0 chr2 88756474 88756758 -164499825 - AluSx SINE Alu -15 297 1 1143 262 69 36 chr2 88757424 88757817 -164498766 - MLT1K LTR MaLR -33 555 150 1108 213 0 5 chr2 88757837 88758053 -164498530 + L1MC4 LINE L1 7370 7584 -458 830 134 0 22 chr2 88758055 88758189 -164498394 + AluJo/FLAM SINE Alu 3 133 -169 2085 113 3 0 chr2 88758192 88758485 -164498098 + AluSq SINE Alu 1 294 -19 1264 194 147 4 chr2 88758491 88758749 -164497834 + AluJb SINE Alu 2 296 -6 21 0 0 0 chr2 88759704 88759725 -164496858 + AT_rich Low_complexity Low_complexity 1 21 0 1425 179 3 53 chr2 88759779 88760080 -164496503 + AluJb SINE Alu 1 286 -26 324 94 78 31 chr2 88760482 88760518 -164496065 - MLT2C1 LTR ERVL -8 456 423 324 0 0 0 chr2 88760518 88760554 -164496029 + (CA)n Simple_repeat Simple_repeat 2 37 0 324 94 78 31 chr2 88760554 88760581 -164496002 - MLT2C1 LTR ERVL -41 423 390 3119 133 48 64 chr2 88760600 88761209 -164495374 - LTR9 LTR ERV1 -13 599 1 1581 203 41 3 chr2 88761209 88761523 -164495060 - MLT2C1 LTR ERVL -71 326 1 239 219 113 94 chr2 88761702 88761862 -164494721 + MLT1J LTR MaLR 306 468 -43 2055 124 10 0 chr2 88761877 88762184 -164494399 - AluSx SINE Alu -2 310 1 2140 105 0 3 chr2 88762187 88762482 -164494101 - AluSx SINE Alu -18 294 1 183 222 0 0 chr2 88762550 88762595 -164493988 + (CA)n Simple_repeat Simple_repeat 2 46 0 316 87 0 0 chr2 88762722 88762767 -164493816 + MLT2B3 LTR ERVL 1 45 -509 972 98 201 0 chr2 88762767 88762931 -164493652 - Tigger7 DNA MER2_type 0 2487 2291 * 1649 181 14 17 chr2 88762930 88763222 -164493361 - Tigger7 DNA MER2_type -436 297 7 2876 153 15 11 chr2 88763229 88763698 -164492885 + MLT2B3 LTR ERVL 45 515 -39 586 152 0 11 chr2 88763726 88763818 -164492765 - FLAM_A SINE Alu -27 115 25 2436 51 0 26 chr2 88763823 88764134 -164492449 - AluY SINE Alu -8 303 1 2188 107 0 3 chr2 88764138 88764446 -164492137 - AluSx SINE Alu -5 307 1 428 194 97 0 chr2 88764469 88764562 -164492021 - MLT1H1 LTR MaLR 0 555 454 1629 161 58 7 chr2 88764566 88764857 -164491726 + MER2 DNA MER2_type 40 345 0 259 188 0 0 chr2 88764857 88764903 -164491680 + MLT2B3 LTR ERVL 468 513 -7 271 309 63 6 chr2 88764957 88765132 -164491451 + L1M4 LINE L1 3716 3900 -2246 2036 112 16 0 chr2 88765132 88765436 -164491147 - AluSp SINE Alu -4 309 1 837 210 171 4 chr2 88765462 88765807 -164490776 + MLT2B1 LTR ERVL 1 465 -55 1733 169 0 19 chr2 88765807 88766120 -164490463 + AluSg SINE Alu 1 307 -3 235 0 0 54 chr2 88766120 88766157 -164490426 + (GGGA)n Simple_repeat Simple_repeat 2 36 0 1353 168 17 62 chr2 88766160 88766607 -164489976 + MER4B-int LTR ERV1 1678 2292 -4466 2199 89 14 0 chr2 88766687 88766980 -164489603 + AluSc SINE Alu 1 297 -12 1013 161 0 6 chr2 88766982 88767150 -164489433 + AluSg/x SINE Alu 134 300 -10 4246 101 78 8 chr2 88767692 88768285 -164488298 + MER51A LTR ERV1 1 634 0 1963 117 48 0 chr2 88769398 88769688 -164486895 - AluSq SINE Alu -9 304 1 679 167 249 47 chr2 88770377 88770610 -164485973 + L1MCa LINE L1 1900 2179 -4247 * 1156 186 34 37 chr2 88770603 88770797 -164485786 + L1MB4 LINE L1 5873 6068 -112 2158 82 3 3 chr2 88770797 88771103 -164485480 - AluSg SINE Alu 0 306 1 1156 186 34 37 chr2 88771103 88771176 -164485407 + L1MB4 LINE L1 6068 6140 -40 478 174 0 33 chr2 88771418 88771539 -164485044 + CT-rich Low_complexity Low_complexity 4 120 0 2203 83 22 4 chr2 88771544 88771845 -164484738 - AluSq SINE Alu 0 306 1 1014 173 0 23 chr2 88771851 88772024 -164484559 - FRAM SINE Alu -15 161 1 2449 72 0 7 chr2 88772402 88772708 -164483875 - AluSc SINE Alu -5 304 1 316 239 13 116 chr2 88772748 88772839 -164483744 + L1MC/D LINE L1 5707 5777 -2031 870 266 48 0 chr2 88772839 88773046 -164483537 - MER58A DNA MER1_type -4 220 4 316 239 13 116 chr2 88773046 88773109 -164483474 + L1MC/D LINE L1 5777 5845 -1963 2443 76 3 0 chr2 88773127 88773429 -164483154 - AluSq SINE Alu -10 303 1 1807 160 7 7 chr2 88773502 88773789 -164482794 + AluJb SINE Alu 1 287 -25 2530 56 3 0 chr2 88774196 88774499 -164482084 - AluY SINE Alu -7 304 1 2536 40 0 16 chr2 88774630 88774933 -164481650 - AluY SINE Alu -13 298 1 1151 289 72 63 chr2 88774963 88775507 -164481076 - L1ME LINE L1 -451 5711 5174 2122 106 17 10 chr2 88775507 88775808 -164480775 + AluSg SINE Alu 1 303 -7 1151 289 72 63 chr2 88775808 88775860 -164480723 - L1ME LINE L1 -988 5174 5124 300 27 0 0 chr2 88775860 88775897 -164480686 + (GA)n Simple_repeat Simple_repeat 1 37 0 291 54 0 0 chr2 88775896 88775933 -164480650 + (TG)n Simple_repeat Simple_repeat 1 37 0 * 1151 289 72 63 chr2 88775897 88776655 -164479928 - L1ME LINE L1 -1038 5124 4381 1363 151 21 8 chr2 88776659 88776897 -164479686 - L1MB3 LINE L1 -1 6182 5942 1160 135 0 6 chr2 88776923 88777093 -164479490 - AluSg/x SINE Alu -15 297 129 22 35 0 0 chr2 88777285 88777314 -164479269 + AT_rich Low_complexity Low_complexity 1 29 0 2268 101 0 0 chr2 88777314 88777602 -164478981 - AluSx SINE Alu -23 289 2 751 190 0 51 chr2 88777612 88777749 -164478834 - FLAM_C SINE Alu -3 130 1 1615 179 14 7 chr2 88777759 88778099 -164478484 - AluJo SINE Alu 0 312 3 323 313 146 28 chr2 88778249 88778537 -164478046 - L1MEd LINE L1 -5508 611 290 2238 113 7 3 chr2 88778680 88778989 -164477594 - AluSx SINE Alu -2 310 1 2294 85 0 7 chr2 88779505 88779798 -164476785 - AluSq SINE Alu -22 291 1 2255 102 13 3 chr2 88779798 88780101 -164476482 - AluSg SINE Alu -3 307 1 1979 139 26 7 chr2 88780273 88780576 -164476007 - AluSx SINE Alu -2 310 2 1569 164 7 55 chr2 88780613 88780923 -164475660 + AluJb SINE Alu 1 295 -17 2238 105 7 13 chr2 88780989 88781294 -164475289 - AluSq SINE Alu -10 303 1 5602 188 48 49 chr2 88781298 88782012 -164474571 - L1M4 LINE L1 -653 5525 4812 1762 179 7 3 chr2 88782012 88782309 -164474274 - AluJb SINE Alu -14 298 1 5602 188 48 49 chr2 88782309 88782684 -164473899 - L1M4 LINE L1 -1366 4812 4438 1961 150 102 9 chr2 88782684 88783018 -164473565 + MER47A DNA MER2_type 2 366 0 5602 188 48 49 chr2 88783018 88783071 -164473512 - L1M4 LINE L1 -1740 4438 4386 1428 218 33 4 chr2 88783071 88783346 -164473237 - AluJo SINE Alu -16 286 4 5602 188 48 49 chr2 88783346 88783493 -164473090 - L1M4 LINE L1 -1792 4386 4240 1967 117 3 40 chr2 88783493 88783653 -164472930 - AluSx SINE Alu -22 290 126 321 0 0 58 chr2 88783653 88783705 -164472878 + (TTTTA)n Simple_repeat Simple_repeat 2 50 0 2256 99 0 0 chr2 88783705 88783988 -164472595 - AluSq SINE Alu -30 283 1 1967 117 3 40 chr2 88783988 88784126 -164472457 - AluSx SINE Alu -184 128 2 5602 188 48 49 chr2 88784126 88784407 -164472176 - L1M4 LINE L1 -1938 4240 3961 1346 200 138 50 chr2 88784672 88785092 -164471491 - MSTB2 LTR MaLR 0 457 1 1613 152 45 45 chr2 88785212 88785502 -164471081 + AluJb SINE Alu 1 290 -22 1840 130 0 0 chr2 88785980 88786233 -164470350 - AluSq SINE Alu -60 253 1 344 214 38 114 chr2 88787269 88787400 -164469183 - MIR SINE MIR -137 125 5 1645 191 14 17 chr2 88787825 88788118 -164468465 + AluJo SINE Alu 1 292 -20 63 36 0 0 chr2 88788123 88788207 -164468376 + AT_rich Low_complexity Low_complexity 1 84 0 1012 160 0 53 chr2 88789076 88789263 -164467320 + MER1B DNA MER1_type 1 177 -120 225 94 0 0 chr2 88789909 88789941 -164466642 + (TTC)n Simple_repeat Simple_repeat 2 33 0 699 203 0 0 chr2 88790207 88790330 -164466253 - AluJb SINE Alu -188 124 2 2216 112 0 13 chr2 88791123 88791428 -164465155 - AluSq SINE Alu -12 301 1 2388 85 13 3 chr2 88792065 88792372 -164464211 - AluSg SINE Alu 0 310 1 198 0 0 0 chr2 88793074 88793096 -164463487 + (T)n Simple_repeat Simple_repeat 1 22 0 812 183 0 29 chr2 88795028 88795165 -164461418 - FLAM_A SINE Alu 0 133 1 204 40 0 0 chr2 88795677 88795702 -164460881 + (TTTTC)n Simple_repeat Simple_repeat 2 26 0 1845 126 3 35 chr2 88795709 88795994 -164460589 - AluSg SINE Alu -34 276 1 1120 52 7 15 chr2 88795994 88796130 -164460453 - AluSq/x SINE Alu -177 135 1 1759 159 29 0 chr2 88796277 88796553 -164460030 + AluJo SINE Alu 1 284 -28 202 179 18 18 chr2 88796554 88796610 -164459973 + (TA)n Simple_repeat Simple_repeat 2 57 0 2035 148 0 0 chr2 88797661 88797959 -164458624 + AluSx SINE Alu 2 299 -13 1758 161 29 38 chr2 88798110 88798452 -164458131 + MER44D DNA MER2_type 1 609 0 1336 107 84 19 chr2 88799218 88799433 -164457150 + L1PA14 LINE L1 5931 6159 -2 342 284 92 0 chr2 88800221 88800330 -164456253 - L2 LINE L2 0 3313 3195 239 135 0 0 chr2 88801167 88801204 -164455379 + AluJb SINE Alu 1 37 -265 1596 154 41 4 chr2 88801204 88801471 -164455112 + AluJb SINE Alu 16 292 -20 312 232 0 0 chr2 88802050 88802119 -164454464 + Charlie7 DNA MER1_type 37 105 -2507 226 191 169 11 chr2 88802089 88802178 -164454405 + Charlie7 DNA MER1_type 2454 2556 -56 * 460 295 71 48 chr2 88802200 88802410 -164454173 + MIR SINE MIR 47 261 -1 311 264 27 27 chr2 88803066 88803176 -164453407 + MER103 DNA DNA 14 123 -43 2275 100 0 3 chr2 88803392 88803683 -164452900 - AluSq SINE Alu -23 290 1 2184 91 7 17 chr2 88808209 88808506 -164448077 + AluSg SINE Alu 1 294 -16 2301 87 13 0 chr2 88809418 88809717 -164446866 + AluSg1 SINE Alu 1 303 -6 2125 93 3 90 chr2 88810911 88811245 -164445338 - AluSq SINE Alu -8 305 1 273 268 12 24 chr2 88811744 88811826 -164444757 - MLT1E LTR MaLR -512 81 1 1983 80 4 4 chr2 88812078 88812329 -164444254 - AluSx SINE Alu -17 295 45 2181 58 44 0 chr2 88812441 88812715 -164443868 - AluY SINE Alu -3 308 23 1684 163 27 14 chr2 88812743 88813038 -164443545 + AluJb SINE Alu 14 312 0 189 340 142 14 chr2 88813065 88813206 -164443377 + L3 LINE CR1 428 586 -991 2099 123 0 0 chr2 88813366 88813693 -164442890 - AluSq SINE Alu 0 327 1 2255 78 0 3 chr2 88813720 88814065 -164442518 - AluY SINE Alu 0 344 1 660 236 80 87 chr2 88814075 88814225 -164442358 - L1MC5 LINE L1 -185 7776 7627 2332 92 3 0 chr2 88814225 88814520 -164442063 - AluSp SINE Alu -17 296 1 660 236 80 87 chr2 88814520 88814843 -164441740 - L1MC5 LINE L1 -334 7627 7306 2261 96 0 3 chr2 88814845 88815138 -164441445 - AluSg SINE Alu -18 292 1 749 198 16 0 chr2 88815489 88815615 -164440968 + AluJb SINE Alu 2 129 -183 1047 236 241 12 chr2 88815660 88816080 -164440503 - MER20B DNA MER1_type -149 634 119 2329 98 0 10 chr2 88816248 88816555 -164440028 - AluSx SINE Alu -8 304 1 1788 148 96 28 chr2 88816623 88816947 -164439636 - MER7A DNA MER2_type -1 345 2 2184 121 3 10 chr2 88817577 88817890 -164438693 - AluSx SINE Alu -1 311 1 187 43 0 0 chr2 88817901 88817924 -164438659 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2235 97 0 10 chr2 88817924 88818212 -164438371 - AluSq SINE Alu -28 285 1 365 200 168 26 chr2 88818215 88818370 -164438213 + MER112 DNA MER1_type 42 218 -42 346 100 0 0 chr2 88818386 88818436 -164438147 + (TTTA)n Simple_repeat Simple_repeat 2 128 0 1963 126 0 38 chr2 88818436 88818729 -164437854 - AluSx SINE Alu -1 331 1 702 203 0 0 chr2 88818732 88818880 -164437703 + (TCTA)n Simple_repeat Simple_repeat 3 150 0 264 88 0 0 chr2 88818882 88818916 -164437667 - Alu SINE Alu -21 281 248 360 105 0 14 chr2 88818918 88818981 -164437602 - Alu SINE Alu -258 44 1 2215 88 0 7 chr2 88818985 88819268 -164437315 - AluSg SINE Alu -29 281 1 21 36 0 0 chr2 88819270 88819298 -164437285 + AT_rich Low_complexity Low_complexity 1 28 0 2211 76 43 0 chr2 88819963 88820240 -164436343 - AluY SINE Alu -22 289 1 1037 245 77 79 chr2 88820352 88820585 -164435998 - MER20B DNA MER1_type -284 499 267 1748 136 9 97 chr2 88820585 88820772 -164435811 - AluJo SINE Alu -3 309 164 180 0 0 0 chr2 88820772 88820792 -164435791 + (TTTTG)n Simple_repeat Simple_repeat 5 24 0 1748 136 9 97 chr2 88820792 88820943 -164435640 - AluJo SINE Alu -148 164 1 198 0 0 0 chr2 88820958 88820980 -164435603 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 2112 138 0 3 chr2 88820980 88821276 -164435307 - AluSx SINE Alu -15 297 1 1037 245 77 79 chr2 88821276 88821526 -164435057 - MER20B DNA MER1_type -523 260 8 231 133 222 0 chr2 88821535 88821580 -164435003 + MER112 DNA MER1_type 198 252 -8 1422 183 103 10 chr2 88821584 88821884 -164434699 - MER7A DNA MER2_type -3 343 18 1200 184 47 36 chr2 88822225 88822502 -164434081 - L1MD3 LINE L1 0 7995 7716 352 304 127 80 chr2 88822503 88823009 -164433574 - L3 LINE CR1 -256 1321 783 2381 67 0 17 chr2 88823009 88823306 -164433277 + AluY SINE Alu 1 292 -19 352 304 127 80 chr2 88823306 88823374 -164433209 - L3 LINE CR1 -794 783 720 557 163 132 39 chr2 88823424 88823553 -164433030 - FLAM_C SINE Alu -1 142 2 185 322 17 0 chr2 88823557 88823616 -164432967 - L3 LINE CR1 -905 672 613 514 138 11 43 chr2 88823722 88823816 -164432767 - Tigger7 DNA MER2_type 0 2587 2497 1286 172 95 0 chr2 88823821 88824042 -164432541 - Tigger7 DNA MER2_type -469 264 23 2415 90 0 3 chr2 88824047 88824359 -164432224 + AluY SINE Alu 1 311 0 1357 161 55 79 chr2 88824643 88824791 -164431792 - AluSq SINE Alu 0 310 160 1741 116 0 0 chr2 88824791 88825024 -164431559 - AluSq SINE Alu -80 233 1 310 92 15 77 chr2 88825029 88825094 -164431489 - L1MA5 LINE L1 0 6300 6240 2384 96 0 6 chr2 88825095 88825407 -164431176 - AluY SINE Alu -1 310 1 350 148 0 0 chr2 88825414 88825475 -164431108 - L1MA5 LINE L1 0 6300 6240 1357 161 55 79 chr2 88825475 88825627 -164430956 - AluSq SINE Alu -160 150 1 1036 123 0 0 chr2 88825631 88825785 -164430798 - L1MA5 LINE L1 -50 6250 6097 2570 65 3 0 chr2 88826108 88826416 -164430167 - AluY SINE Alu -2 309 1 2153 94 33 3 chr2 88826645 88826944 -164429639 + AluSp SINE Alu 1 308 -5 2116 102 38 7 chr2 88827587 88827880 -164428703 - AluSx SINE Alu -10 302 1 786 223 16 16 chr2 88827882 88828075 -164428508 + MER82 DNA MER2_type 24 216 -437 460 12 77 60 chr2 88828075 88828243 -164428340 + (TA)n Simple_repeat Simple_repeat 2 172 0 1192 191 16 51 chr2 88828294 88828551 -164428032 + MER82 DNA MER2_type 330 577 -76 1282 184 135 4 chr2 88828558 88828824 -164427759 - AluJo SINE Alu -1 301 1 1841 146 170 16 chr2 88828848 88829219 -164427364 + MSTA LTR MaLR 1 428 0 776 286 128 28 chr2 88829495 88829964 -164426619 - HAL1 LINE L1 -1956 551 36 1780 149 17 7 chr2 88829984 88830272 -164426311 + AluSx SINE Alu 1 291 -21 818 154 105 0 chr2 88830338 88830481 -164426102 + MER3 DNA MER1_type 51 208 -1 1348 200 48 64 chr2 88830530 88830641 -164425942 - L1MC4 LINE L1 -920 7122 7011 2239 112 3 0 chr2 88830641 88830935 -164425648 - AluSc SINE Alu -14 295 1 1348 200 48 64 chr2 88830935 88831243 -164425340 - L1MC4 LINE L1 -1031 7011 6710 260 160 140 0 chr2 88831252 88831302 -164425281 - MER3 DNA MER1_type -133 76 20 314 193 171 71 chr2 88831494 88831580 -164425003 - LTR50 LTR ERVL -638 157 81 797 217 94 20 chr2 88831580 88831783 -164424800 - MER20 DNA MER1_type 0 219 2 314 193 171 71 chr2 88831783 88831836 -164424747 - LTR50 LTR ERVL -714 81 4 221 267 78 0 chr2 88832380 88832470 -164424113 + L2 LINE L2 2284 2380 -934 2313 98 0 0 chr2 88833312 88833607 -164422976 + AluSg SINE Alu 1 295 -15 310 247 0 12 chr2 88834192 88834277 -164422306 + MIR SINE MIR 57 140 -122 264 122 0 0 chr2 88834497 88834538 -164422045 + (CGTG)n Simple_repeat Simple_repeat 1 41 0 682 122 0 10 chr2 88834538 88834636 -164421947 - FLAM_C SINE Alu -14 129 33 882 56 0 0 chr2 88834864 88834971 -164421612 + AluSg/x SINE Alu 196 302 -7 205 184 20 0 chr2 88835070 88835119 -164421464 - L2 LINE L2 -1 3312 3263 21 0 0 0 chr2 88835739 88835760 -164420823 + AT_rich Low_complexity Low_complexity 1 21 0 1863 127 98 0 chr2 88836484 88836760 -164419823 - AluSx SINE Alu -9 303 1 2893 13 0 6 chr2 88836804 88837120 -164419463 - AluYb8 SINE Alu -4 314 1 23 0 0 0 chr2 88837636 88837659 -164418924 + AT_rich Low_complexity Low_complexity 1 23 0 2310 93 7 0 chr2 88838062 88838364 -164418219 - AluSx SINE Alu -8 304 1 779 50 0 0 chr2 88838590 88838689 -164417894 - AluSx SINE Alu -3 307 209 1216 70 0 0 chr2 88838689 88838831 -164417752 - AluSx SINE Alu -170 142 1 249 242 10 0 chr2 88839532 88839633 -164416950 + L1MC4 LINE L1 2006 6983 -1339 1681 180 10 20 chr2 88840220 88840526 -164416057 - AluJb SINE Alu -9 303 1 1026 161 23 0 chr2 88840668 88840842 -164415741 - AluJo SINE Alu -14 298 121 413 177 133 9 chr2 88840846 88840959 -164415624 + L2 LINE L2 3179 3305 -8 2271 79 10 0 chr2 88841136 88841426 -164415157 + AluY SINE Alu 1 293 -18 216 0 0 0 chr2 88841604 88841628 -164414955 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 2195 83 0 0 chr2 88841643 88841909 -164414674 - AluSq SINE Alu -45 268 3 384 215 91 8 chr2 88841985 88842106 -164414477 + AluSq/x SINE Alu 2 132 -170 477 257 33 26 chr2 88842283 88842435 -164414148 - AluJb SINE Alu -21 291 139 4232 141 54 43 chr2 88842736 88842796 -164413787 + L1MB7 LINE L1 5339 5397 -787 2208 122 3 6 chr2 88842796 88843107 -164413476 + AluSx SINE Alu 3 312 0 4232 141 54 43 chr2 88843107 88843606 -164412977 + L1MB7 LINE L1 5397 5912 -272 2390 86 0 13 chr2 88843606 88843910 -164412673 + AluSx SINE Alu 1 300 -12 4232 141 54 43 chr2 88843910 88844170 -164412413 + L1MB7 LINE L1 5912 6168 -16 1829 158 7 10 chr2 88844182 88844473 -164412110 + AluJo SINE Alu 1 290 -22 22 0 0 0 chr2 88844473 88844495 -164412088 + AT_rich Low_complexity Low_complexity 1 22 0 1198 96 57 0 chr2 88844505 88844662 -164411921 + AluSp SINE Alu 133 298 -15 182 231 0 0 chr2 88844796 88844835 -164411748 - MIR SINE MIR -25 237 199 1819 177 0 34 chr2 88845734 88845873 -164410710 + AluJo SINE Alu 1 143 -169 2284 112 0 0 chr2 88845873 88846169 -164410414 + AluSg SINE Alu 1 296 -14 1819 177 0 34 chr2 88846169 88846351 -164410232 + AluJo SINE Alu 143 311 -1 2180 126 0 3 chr2 88846409 88846718 -164409865 + AluSx SINE Alu 1 308 -4 880 160 73 78 chr2 88846900 88847016 -164409567 - MER58A DNA MER1_type -2200 220 104 2052 115 14 14 chr2 88847016 88847152 -164409431 + AluSx SINE Alu 1 136 -176 2448 102 0 0 chr2 88847152 88847465 -164409118 + AluSq SINE Alu 1 313 0 2052 115 14 14 chr2 88847465 88847623 -164408960 + AluSx SINE Alu 135 295 -17 880 160 73 78 chr2 88847623 88847725 -164408858 - MER58A DNA MER1_type -2316 104 3 570 231 184 1 chr2 88847742 88847962 -164408621 - MIR SINE MIR -1 261 1 426 85 0 0 chr2 88848023 88848082 -164408501 + (CTCA)n Simple_repeat Simple_repeat 1 59 0 2004 123 3 23 chr2 88848161 88848461 -164408122 - AluJb SINE Alu -18 294 1 2270 63 16 51 chr2 88848517 88848832 -164407751 - AluY SINE Alu -7 304 1 541 149 149 52 chr2 88848978 88849132 -164407451 + MER69A DNA AcHobo 1 169 -8 279 290 32 81 chr2 88849832 88849956 -164406627 + L2 LINE L2 3154 3271 -1 2171 95 20 13 chr2 88850112 88850417 -164406166 - AluSq SINE Alu -6 307 1 260 327 0 19 chr2 88851069 88851173 -164405410 - MER5A DNA MER1_type -2 187 86 1073 143 18 30 chr2 88851314 88851482 -164405101 - AluJb SINE Alu -10 302 137 2182 87 7 27 chr2 88851663 88851961 -164404622 - AluSg SINE Alu -18 292 1 977 104 8 15 chr2 88851961 88852095 -164404488 - AluSg SINE Alu -177 133 1 2169 100 43 3 chr2 88852381 88852681 -164403902 - AluSx SINE Alu 0 312 1 200 311 14 27 chr2 88852849 88852923 -164403660 + L2 LINE L2 3189 3261 -52 840 182 7 0 chr2 88852943 88853086 -164403497 + L1PA16 LINE L1 5978 6121 -45 1793 162 0 26 chr2 88853188 88853491 -164403092 + AluJb SINE Alu 1 295 -17 249 333 36 10 chr2 88853633 88853825 -164402758 - L1ME LINE L1 -384 5737 5541 262 379 26 0 chr2 88854327 88854480 -164402103 - L2 LINE L2 -702 2612 2456 2310 107 0 0 chr2 88855374 88855673 -164400910 + AluSx SINE Alu 1 299 -13 1697 166 10 39 chr2 88855704 88856012 -164400571 + AluJo SINE Alu 1 299 -13 456 238 24 16 chr2 88856349 88856475 -164400108 + MIR SINE MIR 33 159 -103 422 200 35 83 chr2 88856590 88856658 -164399925 - Charlie1 DNA MER1_type -4 2757 2698 1854 115 34 41 chr2 88856658 88856953 -164399630 - AluSg SINE Alu -17 293 1 422 200 35 83 chr2 88856953 88857029 -164399554 - Charlie1 DNA MER1_type -63 2698 2620 1697 47 0 0 chr2 88857135 88857328 -164399255 - AluSc SINE Alu -116 193 1 254 146 0 36 chr2 88857328 88857383 -164399200 + (TTCC)n Simple_repeat Simple_repeat 1 53 0 928 195 17 11 chr2 88857383 88857557 -164399026 - AluJb SINE Alu -1 311 137 4232 141 54 43 chr2 88857856 88857916 -164398667 + L1MB7 LINE L1 5339 5397 -787 2208 122 3 6 chr2 88857916 88858227 -164398356 + AluSx SINE Alu 3 312 0 4232 141 54 43 chr2 88858227 88858726 -164397857 + L1MB7 LINE L1 5397 5912 -272 2390 86 0 13 chr2 88858726 88859030 -164397553 + AluSx SINE Alu 1 300 -12 4232 141 54 43 chr2 88859030 88859290 -164397293 + L1MB7 LINE L1 5912 6168 -16 1829 158 7 10 chr2 88859302 88859593 -164396990 + AluJo SINE Alu 1 290 -22 22 0 0 0 chr2 88859593 88859615 -164396968 + AT_rich Low_complexity Low_complexity 1 22 0 1198 96 57 0 chr2 88859625 88859782 -164396801 + AluSp SINE Alu 133 298 -15 182 231 0 0 chr2 88859916 88859955 -164396628 - MIR SINE MIR -25 237 199 1668 176 3 40 chr2 88860854 88860993 -164395590 + AluJo SINE Alu 1 144 -168 2256 115 0 0 chr2 88860993 88861289 -164395294 + AluSg SINE Alu 1 296 -14 1668 176 3 40 chr2 88861289 88861472 -164395111 + AluJo SINE Alu 144 311 -1 2180 126 0 3 chr2 88861530 88861839 -164394744 + AluSx SINE Alu 1 308 -4 963 163 63 77 chr2 88862021 88862137 -164394446 - MER58A DNA MER1_type -2200 220 107 2052 115 14 14 chr2 88862137 88862273 -164394310 + AluSx SINE Alu 1 136 -176 2448 102 0 0 chr2 88862273 88862586 -164393997 + AluSq SINE Alu 1 313 0 2052 115 14 14 chr2 88862586 88862744 -164393839 + AluSx SINE Alu 135 295 -17 963 163 63 77 chr2 88862744 88862848 -164393735 - MER58A DNA MER1_type -2313 107 3 570 231 184 1 chr2 88862865 88863085 -164393498 - MIR SINE MIR -1 261 1 426 85 0 0 chr2 88863146 88863205 -164393378 + (CTCA)n Simple_repeat Simple_repeat 1 59 0 2004 123 3 23 chr2 88863284 88863584 -164392999 - AluJb SINE Alu -18 294 1 2270 63 16 51 chr2 88863640 88863955 -164392628 - AluY SINE Alu -7 304 1 541 149 149 52 chr2 88864101 88864255 -164392328 + MER69A DNA AcHobo 1 169 -8 279 290 32 81 chr2 88864955 88865079 -164391504 + L2 LINE L2 3154 3271 -1 2171 95 20 13 chr2 88865235 88865540 -164391043 - AluSq SINE Alu -6 307 1 260 327 0 19 chr2 88866192 88866296 -164390287 - MER5A DNA MER1_type -2 187 86 1073 143 18 30 chr2 88866437 88866605 -164389978 - AluJb SINE Alu -10 302 137 2058 95 14 27 chr2 88866786 88867082 -164389501 - AluSg SINE Alu -18 292 1 970 126 0 15 chr2 88867082 88867217 -164389366 - AluSg SINE Alu -177 133 1 2289 78 0 3 chr2 88867244 88867589 -164388994 - AluY SINE Alu 0 344 1 561 239 82 88 chr2 88867599 88867749 -164388834 - L1MC5 LINE L1 -185 7776 7627 2355 92 3 0 chr2 88867749 88868044 -164388539 - AluSp SINE Alu -17 296 1 561 239 82 88 chr2 88868044 88868358 -164388225 - L1MC5 LINE L1 -334 7627 7315 2281 96 0 3 chr2 88868369 88868662 -164387921 - AluSg SINE Alu -18 292 1 696 200 20 0 chr2 88868996 88869139 -164387444 + AluJb SINE Alu 2 129 -183 1017 236 241 12 chr2 88869184 88869604 -164386979 - MER20B DNA MER1_type -149 634 119 2345 98 0 10 chr2 88869772 88870079 -164386504 - AluSx SINE Alu -8 304 1 1679 148 96 28 chr2 88870147 88870471 -164386112 - MER7A DNA MER2_type -1 345 2 648 208 76 15 chr2 88871101 88871298 -164385285 - AluSg/x SINE Alu 0 309 101 377 266 181 8 chr2 88871488 88871736 -164384847 + L1MC4 LINE L1 7752 8042 0 240 214 100 14 chr2 88873734 88873804 -164382779 + MIR SINE MIR 35 110 -152 308 348 92 0 chr2 88875090 88875231 -164381352 + MIR SINE MIR 66 219 -43 281 109 174 0 chr2 88876074 88876120 -164380463 + AluJb SINE Alu 85 138 -164 1706 91 0 0 chr2 88876120 88876329 -164380254 + AluSg1 SINE Alu 1 209 -100 1213 194 5 0 chr2 88876333 88876544 -164380039 + AluJb SINE Alu 85 296 -16 621 196 139 12 chr2 88876766 88876939 -164379644 + L1MD3 LINE L1 7791 7985 -10 * 714 211 75 75 chr2 88876931 88877116 -164379467 + L1ME1 LINE L1 5934 6121 -45 2430 78 0 7 chr2 88877116 88877422 -164379161 - AluSx SINE Alu -8 304 1 714 211 75 75 chr2 88877422 88877464 -164379119 + L1ME1 LINE L1 6120 6161 -5 2251 62 35 7 chr2 88877494 88877782 -164378801 + AluY SINE Alu 1 296 -15 2151 102 0 0 chr2 88878186 88878501 -164378082 - AluSx SINE Alu 0 315 1 779 153 163 10 chr2 88878582 88878784 -164377799 + Charlie1 DNA MER1_type 2378 2610 -151 965 112 28 0 chr2 88878791 88878958 -164377625 - AluSg/x SINE Alu 0 302 132 1018 94 14 150 chr2 88879058 88879271 -164377312 - AluSx SINE Alu -128 184 1 405 0 0 0 chr2 88879345 88879390 -164377193 + (TG)n Simple_repeat Simple_repeat 2 46 0 2211 100 3 3 chr2 88879789 88880089 -164376494 - AluSx SINE Alu -12 300 1 2200 120 0 3 chr2 88880225 88880524 -164376059 - AluJb SINE Alu -14 298 1 340 219 26 70 chr2 88881500 88881614 -164374969 + MIR SINE MIR 49 157 -105 1893 150 19 3 chr2 88881727 88882034 -164374549 + AluSx SINE Alu 1 312 0 352 255 32 0 chr2 88882309 88882403 -164374180 - L2 LINE L2 -1 3312 3216 * 888 275 187 6 chr2 88882399 88882981 -164373602 + L2 LINE L2 2398 2873 -440 1683 118 4 0 chr2 88882981 88883210 -164373373 - AluSq SINE Alu -81 232 3 888 275 187 6 chr2 88883210 88883273 -164373310 + L2 LINE L2 2873 2923 -390 270 95 0 0 chr2 88883273 88883315 -164373268 + (CA)n Simple_repeat Simple_repeat 1 42 0 888 275 187 6 chr2 88883315 88883427 -164373156 + L2 LINE L2 2923 3313 0 3331 156 29 16 chr2 88883485 88884100 -164372483 + L1MB7 LINE L1 5546 6168 -16 213 196 0 0 chr2 88884121 88884167 -164372416 - MIR SINE MIR -96 166 121 506 295 96 62 chr2 88884169 88884667 -164371916 + REP3 LTR ERV 1 515 -47 354 259 7 79 chr2 88886443 88886582 -164370001 + MIR SINE MIR 15 143 -119 1694 261 49 38 chr2 88886751 88887134 -164369449 + HERV16 LTR ERVL 1630 2022 -2974 1719 185 3 16 chr2 88887134 88887448 -164369135 + AluJo SINE Alu 1 310 -2 1694 261 49 38 chr2 88887448 88887592 -164368991 + HERV16 LTR ERVL 2022 2163 -2833 654 199 81 5 chr2 88887592 88887778 -164368805 - L1M4 LINE L1 -701 5483 5284 919 186 0 0 chr2 88887779 88887935 -164368648 - AluJb SINE Alu -10 302 147 1604 87 0 14 chr2 88887936 88888143 -164368440 - AluSg/x SINE Alu -38 272 69 1152 199 0 10 chr2 88888371 88888577 -164368006 - AluJo SINE Alu -108 204 1 1143 142 50 93 chr2 88888583 88888681 -164367902 - L1M4 LINE L1 -866 5280 5179 2238 94 13 3 chr2 88888681 88888989 -164367594 - AluY SINE Alu 0 311 1 2180 129 0 0 chr2 88888993 88889287 -164367296 - AluSx SINE Alu -16 296 3 1143 142 50 93 chr2 88889287 88889406 -164367177 - L1M4 LINE L1 -970 5176 4458 9170 196 45 52 chr2 88889406 88889573 -164367010 - L1MB5 LINE L1 0 6174 6007 2250 113 0 25 chr2 88889573 88889892 -164366691 - AluSq SINE Alu -2 311 1 9170 196 45 52 chr2 88889892 88891020 -164365563 - L1MB5 LINE L1 -167 6007 4873 1881 136 49 0 chr2 88891020 88891306 -164365277 - AluJb SINE Alu -12 300 1 9170 196 45 52 chr2 88891306 88891319 -164365264 - L1MB5 LINE L1 -1301 4873 4861 960 63 0 8 chr2 88891319 88891445 -164365138 - L1MA2 LINE L1 0 6304 6180 9170 196 45 52 chr2 88891445 88891688 -164364895 - L1MB5 LINE L1 -1313 4861 4618 2489 62 10 7 chr2 88891688 88891994 -164364589 - AluSg SINE Alu 0 310 4 9170 196 45 52 chr2 88891994 88893746 -164362837 - L1MB5 LINE L1 -1556 4618 3018 1788 176 7 3 chr2 88893746 88894052 -164362531 - AluJb SINE Alu -5 307 1 9170 196 45 52 chr2 88894052 88894390 -164362193 - L1MB5 LINE L1 -3156 3018 2679 1237 102 64 55 chr2 88894409 88894441 -164362142 - L1MB4 LINE L1 -18 6162 6132 2134 124 7 3 chr2 88894441 88894747 -164361836 - AluSp SINE Alu -6 307 1 1237 102 64 55 chr2 88894747 88894950 -164361633 - L1MB4 LINE L1 -48 6132 5925 21 0 0 0 chr2 88895106 88895127 -164361456 + AT_rich Low_complexity Low_complexity 1 21 0 833 154 7 21 chr2 88895331 88895474 -164361109 - FLAM_C SINE Alu -2 141 1 392 264 56 62 chr2 88895474 88895652 -164360931 - MIR SINE MIR -8 254 78 716 223 94 39 chr2 88896554 88896587 -164359996 - MIR SINE MIR -5 257 227 2471 65 20 0 chr2 88896587 88896879 -164359704 + AluSg SINE Alu 1 298 -12 716 223 94 39 chr2 88896879 88897078 -164359505 - MIR SINE MIR -35 227 12 276 268 12 24 chr2 88898285 88898367 -164358216 - MLT1E LTR MaLR -512 81 1 760 268 35 109 chr2 88898367 88898826 -164357757 - MLT1E-int LTR MaLR 0 1371 947 427 307 8 0 chr2 88898925 88899052 -164357531 - MLT1E-int LTR MaLR -488 883 756 2296 88 0 3 chr2 88899199 88899507 -164357076 - AluY SINE Alu -4 307 1 1798 69 0 17 chr2 88899627 88899860 -164356723 + AluY SINE Alu 81 309 -2 1631 188 4 4 chr2 88899862 88900138 -164356445 - AluJb SINE Alu -36 276 1 1062 273 11 29 chr2 88900155 88900234 -164356349 - MLT1E-int LTR MaLR -828 543 464 2468 93 0 0 chr2 88900234 88900545 -164356038 - AluY SINE Alu 0 311 1 1062 273 11 29 chr2 88900545 88900988 -164355595 - MLT1E-int LTR MaLR -907 464 1 1861 240 89 34 chr2 88900988 88901550 -164355033 - MLT1E LTR MaLR 0 593 1 693 315 103 20 chr2 88902003 88902476 -164354107 - L1ME3A LINE L1 -222 5948 5435 957 111 0 23 chr2 88902544 88902715 -164353868 + (GGAA)n Simple_repeat Simple_repeat 2 168 0 387 306 38 19 chr2 88902936 88903093 -164353490 + L1MCa LINE L1 561 720 -5399 1005 229 16 59 chr2 88903188 88903493 -164353090 + L1M4 LINE L1 3686 3977 -2169 2083 96 21 110 chr2 88903495 88903914 -164352669 + L1MD1 LINE L1 5849 6230 -12 460 315 94 49 chr2 88903924 88904032 -164352551 + L1MCa LINE L1 863 965 -1525 2375 81 0 13 chr2 88904032 88904342 -164352241 + AluY SINE Alu 1 306 -5 460 315 94 49 chr2 88904342 88904670 -164351913 + L1MCa LINE L1 965 1401 -1089 682 188 70 0 chr2 88904728 88904856 -164351727 - L1MC1 LINE L1 0 6333 6197 3611 163 15 39 chr2 88904860 88905529 -164351054 - L1MC1 LINE L1 -62 6271 5619 2047 165 42 21 chr2 88905535 88905960 -164350623 - L1MB8 LINE L1 0 6178 5745 5098 49 11 2 chr2 88906034 88906663 -164349920 - L1PA8 LINE L1 -1 6171 5537 516 252 77 86 chr2 88906782 88907131 -164349452 - HAL1 LINE L1 -325 2182 1837 242 245 29 49 chr2 88907183 88907285 -164349298 - HAL1 LINE L1 -843 1664 1565 2276 88 3 3 chr2 88907291 88907588 -164348995 + AluSq SINE Alu 1 297 -16 558 211 41 8 chr2 88907600 88907723 -164348860 + FLAM_C SINE Alu 2 128 -5 1749 186 17 3 chr2 88907728 88908029 -164348554 + AluJo SINE Alu 3 307 -5 256 270 56 11 chr2 88908126 88908215 -164348368 - HAL1 LINE L1 -1476 1031 939 323 314 25 25 chr2 88908295 88908413 -164348170 - MER5A DNA MER1_type -1 188 71 468 264 129 13 chr2 88908809 88908964 -164347619 - MER5B DNA MER1_type -2 176 4 2168 112 3 3 chr2 88909419 88909723 -164346860 + AluSc SINE Alu 1 304 -5 1973 136 10 10 chr2 88910227 88910529 -164346054 + AluJo SINE Alu 1 302 -10 370 292 55 61 chr2 88910577 88910806 -164345777 + L1ME4a LINE L1 5583 5811 -310 2082 132 7 0 chr2 88910806 88911095 -164345488 + AluSq SINE Alu 1 291 -22 370 292 55 61 chr2 88911095 88911177 -164345406 + L1ME4a LINE L1 5811 5892 -229 1625 198 122 0 chr2 88911646 88911999 -164344584 + MSTD LTR MaLR 1 396 0 297 232 58 52 chr2 88912201 88912324 -164344259 - L1MC5 LINE L1 -47 7914 7788 1882 155 3 25 chr2 88912324 88912641 -164343942 - AluJb SINE Alu 0 312 3 297 232 58 52 chr2 88912641 88912672 -164343911 - L1MC5 LINE L1 -173 7788 7759 * 497 239 9 0 chr2 88912671 88912784 -164343799 - L1MC4 LINE L1 -1052 6990 6877 343 195 52 13 chr2 88912789 88912866 -164343717 + MLT1H LTR MaLR 2 81 -468 216 0 0 0 chr2 88912958 88912982 -164343601 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6556 24 0 1 chr2 88913046 88913794 -164342789 - L1PA3 LINE L1 0 6155 5409 300 247 49 0 chr2 88913794 88913875 -164342708 + Charlie6 DNA MER1_type 1206 1290 -2210 * 395 245 0 20 chr2 88913872 88913970 -164342613 + MLT1H LTR MaLR 77 172 -377 * 538 239 31 0 chr2 88913962 88914092 -164342491 + Charlie6 DNA MER1_type 192 325 -3175 1042 177 82 32 chr2 88914099 88914319 -164342264 - MLT1F1 LTR MaLR 0 567 337 893 34 0 34 chr2 88914332 88914449 -164342134 - SVA Other Other -3 1383 1271 1041 183 64 103 chr2 88914461 88914594 -164341989 - MLT1F1 LTR MaLR -267 300 163 1652 180 0 3 chr2 88914594 88914877 -164341706 - AluJo SINE Alu -17 295 14 1041 183 64 103 chr2 88914877 88915016 -164341567 - MLT1F1 LTR MaLR -404 163 39 2337 88 0 7 chr2 88915016 88915312 -164341271 - AluSx SINE Alu -6 306 13 1041 183 64 103 chr2 88915312 88915350 -164341233 - MLT1F1 LTR MaLR -528 39 1 3765 230 31 54 chr2 88915358 88915771 -164340812 + Charlie6 DNA MER1_type 333 754 -2746 2138 144 0 0 chr2 88915771 88916077 -164340506 - AluSx SINE Alu 0 312 7 578 172 60 67 chr2 88916082 88916216 -164340367 - FLAM_A SINE Alu 0 133 1 3765 230 31 54 chr2 88916216 88916891 -164339692 + Charlie6 DNA MER1_type 758 1402 -2098 1505 227 11 3 chr2 88916891 88917243 -164339340 + L1M4 LINE L1 2420 2774 -3372 2115 189 93 124 chr2 88917591 88917995 -164338588 + L1MC4 LINE L1 7157 7572 -470 2502 54 3 0 chr2 88917995 88918290 -164338293 + AluY SINE Alu 1 296 -15 2115 189 93 124 chr2 88918290 88918702 -164337881 + L1MC4 LINE L1 7572 7945 -97 2165 110 3 0 chr2 88918702 88918993 -164337590 + AluSx SINE Alu 1 292 -20 2115 189 93 124 chr2 88918993 88919089 -164337494 + L1MC4 LINE L1 7945 8042 0 990 49 0 8 chr2 88919412 88919535 -164337048 - AluY SINE Alu -189 122 6 242 200 0 0 chr2 88919540 88919585 -164336998 - L1MEc LINE L1 -3323 2892 2848 1122 230 92 84 chr2 88919586 88919632 -164336951 - L1MEc LINE L1 -3419 2796 2752 2161 89 20 0 chr2 88919632 88919925 -164336658 + AluSx SINE Alu 1 299 -13 1122 230 92 84 chr2 88919925 88920284 -164336299 - L1MEc LINE L1 -3463 2752 2397 1515 159 52 26 chr2 88920284 88920555 -164336028 - AluSx SINE Alu -34 278 1 1122 230 92 84 chr2 88920555 88920567 -164336016 - L1MEc LINE L1 -3818 2397 2387 2220 105 0 0 chr2 88920567 88920872 -164335711 - AluSc SINE Alu -4 305 1 1122 230 92 84 chr2 88920872 88921162 -164335421 - L1MEc LINE L1 -3828 2387 2101 1978 132 30 0 chr2 88921162 88921458 -164335125 - AluSg SINE Alu -5 305 1 1122 230 92 84 chr2 88921458 88921536 -164335047 - L1MEc LINE L1 -4114 2101 2025 1917 138 0 0 chr2 88921536 88921839 -164334744 - AluSx SINE Alu 0 303 1 1122 230 92 84 chr2 88921839 88921941 -164334642 - L1MEc LINE L1 -4190 2025 1925 2055 105 7 0 chr2 88921942 88922244 -164334339 - AluSx SINE Alu 0 308 5 3124 192 109 30 chr2 88922251 88922468 -164334115 - Cheshire DNA MER1_type -1505 915 717 2272 75 0 3 chr2 88922468 88922761 -164333822 - AluSq SINE Alu -21 292 1 3124 192 109 30 chr2 88922761 88922967 -164333616 - Cheshire DNA MER1_type -1703 717 529 1804 153 146 13 chr2 88922967 88923345 -164333238 + MSTA LTR MaLR 1 428 0 3124 192 109 30 chr2 88923345 88923520 -164333063 - Cheshire DNA MER1_type -1891 529 369 1907 156 55 0 chr2 88923520 88923846 -164332737 + MER7A DNA MER2_type 1 342 -4 3124 192 109 30 chr2 88923846 88923985 -164332598 - Cheshire DNA MER1_type -2051 369 117 743 116 25 8 chr2 88923986 88924107 -164332476 - AluSp/q SINE Alu -12 301 179 2357 48 0 7 chr2 88924113 88924403 -164332180 - AluY SINE Alu -8 303 16 2259 78 3 16 chr2 88924731 88925038 -164331545 + AluSq SINE Alu 1 303 -10 317 179 0 18 chr2 88925867 88925923 -164330660 + Tigger5 DNA MER2_type 1 55 -2268 292 230 0 14 chr2 88925891 88925965 -164330618 + Tigger5 DNA MER2_type 2251 2323 0 * 2271 96 0 6 chr2 88927006 88927320 -164329263 + AluSq SINE Alu 1 312 -1 263 355 16 16 chr2 88927481 88927602 -164328981 + MIR SINE MIR 34 154 -108 901 103 0 0 chr2 88927800 88927917 -164328666 + FLAM_C SINE Alu 2 118 -15 269 26 0 26 chr2 88927926 88927965 -164328618 + (TAAAA)n Simple_repeat Simple_repeat 3 40 0 244 326 58 22 chr2 88928050 88928188 -164328395 + MIR SINE MIR 41 183 -79 1841 114 71 4 chr2 88928725 88929006 -164327577 - AluSx SINE Alu -10 302 3 432 55 0 0 chr2 88929035 88929090 -164327493 + (CA)n Simple_repeat Simple_repeat 2 56 0 1600 163 0 67 chr2 88929198 88929511 -164327072 - AluJb SINE Alu -20 292 1 21 0 0 0 chr2 88929609 88929630 -164326953 + AT_rich Low_complexity Low_complexity 1 21 0 372 285 116 23 chr2 88930131 88930328 -164326255 + MIR SINE MIR 14 223 -39 340 306 67 15 chr2 88930450 88930584 -164325999 - L1MC/D LINE L1 -2346 5462 5322 203 0 37 0 chr2 88931311 88931338 -164325245 + (TA)n Simple_repeat Simple_repeat 1 28 0 * 320 0 25 0 chr2 88931337 88931377 -164325206 + (CA)n Simple_repeat Simple_repeat 2 42 0 1657 157 35 3 chr2 88931377 88931663 -164324920 - AluJb SINE Alu -15 297 3 652 153 0 18 chr2 88932544 88932655 -164323928 - FRAM SINE Alu -1 175 67 695 203 0 0 chr2 88932682 88932805 -164323778 - FLAM_A SINE Alu -10 123 1 187 114 45 0 chr2 88932874 88932918 -164323665 + CT-rich Low_complexity Low_complexity 2 47 0 976 120 7 0 chr2 88932934 88933076 -164323507 - AluSp/q SINE Alu -16 297 155 1521 115 0 5 chr2 88933076 88933293 -164323290 - AluSq SINE Alu -97 216 1 206 333 128 8 chr2 88934344 88934461 -164322122 + L2 LINE L2 3133 3263 -9 2407 84 0 0 chr2 88934503 88934813 -164321770 + AluSg SINE Alu 1 310 0 2213 112 0 0 chr2 88935886 88936198 -164320385 - AluSx SINE Alu 0 312 1 270 106 0 0 chr2 88940047 88940094 -164316489 + (CCG)n Simple_repeat Simple_repeat 1 47 0 32 43 0 0 chr2 88940145 88940191 -164316392 + GC_rich Low_complexity Low_complexity 1 46 0 21 36 0 0 chr2 88940249 88940277 -164316306 + GC_rich Low_complexity Low_complexity 1 28 0 207 114 0 0 chr2 88940508 88940543 -164316040 + (CA)n Simple_repeat Simple_repeat 1 35 0 763 153 0 0 chr2 88941206 88941330 -164315253 + FLAM_A SINE Alu 3 126 -7 450 36 0 0 chr2 88941673 88941729 -164314854 + (CA)n Simple_repeat Simple_repeat 1 56 0 23 33 0 0 chr2 88941794 88941824 -164314759 + AT_rich Low_complexity Low_complexity 1 30 0 237 284 0 0 chr2 88942112 88942179 -164314404 - L1ME4a LINE L1 -112 6009 5943 1254 200 153 79 chr2 88942315 88942623 -164313960 - MLT1D LTR MaLR 0 505 149 2198 102 0 3 chr2 88942623 88942928 -164313655 + AluSg SINE Alu 1 304 -6 1254 200 153 79 chr2 88942928 88943089 -164313494 - MLT1D LTR MaLR -356 149 1 687 271 128 25 chr2 88943099 88943457 -164313126 + L1ME LINE L1 5412 5806 -315 1795 94 4 0 chr2 88943864 88944108 -164312475 - AluSp SINE Alu 0 313 69 298 81 0 0 chr2 88944208 88944245 -164312338 - Alu SINE Alu -261 38 2 2113 108 0 3 chr2 88944263 88944558 -164312025 + AluSg SINE Alu 1 294 -16 1432 215 16 41 chr2 88944565 88944737 -164311846 + L1MB7 LINE L1 2915 3090 -3056 1931 151 0 3 chr2 88944737 88945035 -164311548 + AluJb SINE Alu 1 297 -15 1432 215 16 41 chr2 88945035 88945304 -164311279 + L1MB7 LINE L1 3090 3345 -2801 2425 73 0 0 chr2 88945304 88945606 -164310977 + AluSc SINE Alu 1 302 -7 1143 188 85 53 chr2 88945629 88945727 -164310856 + AluJo SINE Alu 14 107 -205 2703 0 0 0 chr2 88945727 88946023 -164310560 + AluY SINE Alu 16 311 0 1143 188 85 53 chr2 88946023 88946206 -164310377 + AluJo SINE Alu 107 304 -8 4370 231 38 12 chr2 88946215 88947124 -164309459 + L1MB7 LINE L1 3325 4274 -1872 1915 89 40 33 chr2 88947124 88947426 -164309157 + AluY SINE Alu 3 306 -5 4370 231 38 12 chr2 88947426 88947698 -164308885 + L1MB7 LINE L1 4274 4537 -1609 2545 51 0 0 chr2 88947827 88948138 -164308445 - AluY SINE Alu 0 311 1 1879 147 3 0 chr2 88948592 88948892 -164307691 - AluSq SINE Alu -12 301 1 3338 200 20 26 chr2 88948925 88949729 -164306854 + L1MB7 LINE L1 4532 5330 -816 487 174 11 0 chr2 88949730 88949822 -164306761 + L1MB3 LINE L1 6084 6176 -7 1605 180 39 0 chr2 88949839 88950122 -164306461 + AluJo SINE Alu 1 294 -18 3678 180 66 26 chr2 88950129 88950839 -164305744 + L1MB7 LINE L1 5321 6068 -116 2277 84 0 0 chr2 88950839 88951135 -164305448 + AluSc SINE Alu 1 296 -13 3678 180 66 26 chr2 88951135 88951224 -164305359 + L1MB7 LINE L1 6068 6152 -32 2077 168 75 77 chr2 88951224 88951604 -164304979 + Charlie6 DNA MER1_type 2930 3309 -191 2211 106 6 0 chr2 88951604 88951915 -164304668 + AluSp SINE Alu 1 313 0 2077 168 75 77 chr2 88951915 88952069 -164304514 + Charlie6 DNA MER1_type 3309 3465 -35 1688 157 3 17 chr2 88952069 88952363 -164304220 + AluJo SINE Alu 10 299 -13 2077 168 75 77 chr2 88952363 88952399 -164304184 + Charlie6 DNA MER1_type 3465 3500 0 24 32 0 0 chr2 88952425 88952456 -164304127 + AT_rich Low_complexity Low_complexity 1 31 0 2007 252 84 26 chr2 88952456 88952976 -164303607 - L1MC4a LINE L1 -1853 5955 5467 2115 95 14 0 chr2 88952976 88953105 -164303478 + AluSx SINE Alu 1 127 -185 372 22 0 0 chr2 88953105 88953150 -164303433 + (TAAAA)n Simple_repeat Simple_repeat 2 46 0 2115 95 14 0 chr2 88953150 88953315 -164303268 + AluSx SINE Alu 127 299 -13 2007 252 84 26 chr2 88953315 88953363 -164303220 - L1MC4a LINE L1 -2341 5467 5423 1613 162 3 24 chr2 88953363 88953660 -164302923 - AluJo SINE Alu -21 291 1 2007 252 84 26 chr2 88953660 88953753 -164302830 - L1MC4a LINE L1 -2385 5423 5254 266 322 65 26 chr2 88953879 88954109 -164302474 - L1MC4a LINE L1 -1008 5138 4900 2779 10 0 0 chr2 88954117 88954426 -164302157 + AluYb8 SINE Alu 2 310 -8 252 269 76 17 chr2 88954460 88954579 -164302004 - L1MC4a LINE L1 -1338 4808 4683 1298 177 4 0 chr2 88954588 88954814 -164301769 - AluJb SINE Alu -2 310 84 327 310 33 5 chr2 88954920 88955104 -164301479 - L1MC4a LINE L1 -1577 4569 4381 2108 102 3 0 chr2 88955136 88955431 -164301152 - AluSx SINE Alu -5 307 12 370 279 9 76 chr2 88955446 88955510 -164301073 - L1MC4a LINE L1 -1773 4373 4306 180 0 0 0 chr2 88955510 88955530 -164301053 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1957 122 7 0 chr2 88955533 88955812 -164300771 - AluSp SINE Alu -32 281 1 370 279 9 76 chr2 88955812 88955943 -164300640 - L1MC4a LINE L1 -1842 4304 4204 2430 71 0 0 chr2 88955943 88956254 -164300329 - AluY SINE Alu 0 311 1 370 279 9 76 chr2 88956254 88956363 -164300220 - L1MC4a LINE L1 -1942 4204 4089 1829 139 10 3 chr2 88956381 88956669 -164299914 - AluSx SINE Alu -22 290 1 302 313 104 28 chr2 88956764 88956946 -164299637 - LTR16C LTR ERVL -9 482 287 1525 193 71 0 chr2 88957097 88957377 -164299206 - MLT1F LTR MaLR -57 485 186 575 91 0 0 chr2 88957377 88957454 -164299129 - MLT1F LTR MaLR -488 79 3 700 303 14 29 chr2 88957456 88957887 -164298696 + HERV16 LTR ERVL 2658 3151 -2503 3602 330 44 41 chr2 88957944 88958588 -164297995 + HERV16 LTR ERVL 3310 3951 -1813 1047 217 32 0 chr2 88958588 88958805 -164297778 - MER58A DNA MER1_type 0 224 1 3602 330 44 41 chr2 88958805 88959530 -164297053 + HERV16 LTR ERVL 3951 4689 -1075 2079 127 3 0 chr2 88959530 88959830 -164296753 + AluSg SINE Alu 1 301 -9 3602 330 44 41 chr2 88959830 88960452 -164296131 + HERV16 LTR ERVL 4689 5308 -456 1128 301 12 21 chr2 88960659 88960985 -164295598 + LTR16A LTR ERVL 16 338 -112 180 0 0 0 chr2 88960985 88961005 -164295578 + (CA)n Simple_repeat Simple_repeat 2 21 0 27 0 0 0 chr2 88961145 88961172 -164295411 + AT_rich Low_complexity Low_complexity 1 27 0 372 22 0 0 chr2 88961265 88961310 -164295273 + (TG)n Simple_repeat Simple_repeat 2 46 0 324 331 39 47 chr2 88961659 88961786 -164294797 - MIR SINE MIR -67 141 16 1035 75 0 0 chr2 88963500 88963633 -164292950 + AluSg SINE Alu 1 133 -177 2219 84 7 0 chr2 88963633 88963929 -164292654 + AluSg SINE Alu 1 298 -12 265 200 0 0 chr2 88963965 88964015 -164292568 - L2 LINE L2 -1 3312 3263 3319 245 65 98 chr2 88964019 88964263 -164292320 - L1M4 LINE L1 -745 5401 5151 1906 99 0 28 chr2 88964263 88964546 -164292037 + AluSg SINE Alu 36 310 0 3319 245 65 98 chr2 88964546 88964571 -164292012 - L1M4 LINE L1 -995 5151 5127 1500 141 123 15 chr2 88964571 88964840 -164291743 - AluJb SINE Alu -12 300 3 3319 245 65 98 chr2 88964840 88965244 -164291339 - L1M4 LINE L1 -1019 5127 4711 1838 132 7 32 chr2 88965244 88965554 -164291029 + AluSx SINE Alu 5 306 -6 3319 245 65 98 chr2 88965554 88965627 -164290956 - L1M4 LINE L1 -1435 4711 4637 2750 180 12 30 chr2 88965627 88966195 -164290388 - MER74A LTR ERVL 0 558 1 3319 245 65 98 chr2 88966195 88966228 -164290355 - L1M4 LINE L1 -1509 4637 4604 219 36 0 0 chr2 88966228 88966256 -164290327 + (CA)n Simple_repeat Simple_repeat 2 29 0 3319 245 65 98 chr2 88966256 88966689 -164289894 - L1M4 LINE L1 -1542 4604 4158 1852 120 42 0 chr2 88966689 88966973 -164289610 - AluSq SINE Alu -17 296 1 2152 120 7 0 chr2 88966975 88967284 -164289299 - AluSx SINE Alu -1 311 1 3319 245 65 98 chr2 88967284 88967708 -164288875 - L1M4 LINE L1 -1989 4157 3721 489 205 107 9 chr2 88967708 88967820 -164288763 - FLAM_C SINE Alu -9 124 2 3319 245 65 98 chr2 88967820 88967871 -164288712 - L1M4 LINE L1 -2425 3721 3670 1779 155 0 0 chr2 88967871 88968148 -164288435 + AluSx SINE Alu 1 277 -35 294 103 0 0 chr2 88968148 88968187 -164288396 + AluSx SINE Alu 252 290 -11 3319 245 65 98 chr2 88968187 88968345 -164288238 - L1M4 LINE L1 -2475 3671 3509 1875 186 99 28 chr2 88968345 88968781 -164287802 - MLT1C LTR MaLR 0 467 1 3319 245 65 98 chr2 88968781 88968876 -164287707 - L1M4 LINE L1 -2637 3509 3483 1309 219 10 7 chr2 88968876 88969177 -164287406 - AluJo SINE Alu -10 302 1 3319 245 65 98 chr2 88969177 88969321 -164287262 - L1M4 LINE L1 -2663 3483 3336 422 265 49 85 chr2 88969322 88969382 -164287201 - L1M4 LINE L1 -3177 2969 2908 35 0 0 0 chr2 88969382 88969417 -164287166 + AT_rich Low_complexity Low_complexity 1 35 0 422 265 49 85 chr2 88969417 88969545 -164287038 - L1M4 LINE L1 -3238 2908 2755 1942 113 14 35 chr2 88969574 88969857 -164286726 + AluSx SINE Alu 9 285 -27 180 0 0 0 chr2 88969857 88969877 -164286706 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 2372 86 0 0 chr2 88969886 88970176 -164286407 + AluSc SINE Alu 1 290 -19 34 0 0 0 chr2 88970176 88970210 -164286373 + AT_rich Low_complexity Low_complexity 1 34 0 2089 225 39 87 chr2 88970489 88970875 -164285708 - L1MC5 LINE L1 -524 7437 7111 893 279 0 22 chr2 88970875 88971104 -164285479 + MER58A DNA MER1_type 1 224 0 2089 225 39 87 chr2 88971104 88971544 -164285039 - L1MC5 LINE L1 -850 7111 6651 2333 123 0 0 chr2 88971651 88971961 -164284622 - AluSx SINE Alu -2 310 1 333 183 113 0 chr2 88972418 88972489 -164284094 + MIR SINE MIR 154 232 -30 2559 70 0 0 chr2 88972567 88972867 -164283716 - AluY SINE Alu -11 300 1 377 202 111 0 chr2 88973634 88973733 -164282850 + MER103 DNA DNA 53 162 -4 2136 134 7 0 chr2 88974050 88974340 -164282243 - AluSg SINE Alu -17 293 2 2055 97 293 3 chr2 88974372 88974744 -164281839 + LTR12 LTR ERV1 1 480 -234 338 185 15 0 chr2 88976040 88976105 -164280478 + MER20 DNA MER1_type 6 71 -148 795 149 14 21 chr2 88976144 88976285 -164280298 + MER20 DNA MER1_type 80 219 0 434 235 96 22 chr2 88976348 88976484 -164280099 - MIR3 SINE MIR -27 181 36 534 291 63 14 chr2 88976541 88976754 -164279829 - MIR SINE MIR -6 256 26 225 122 0 49 chr2 88977065 88977106 -164279477 + (TCCCC)n Simple_repeat Simple_repeat 3 41 0 391 233 192 21 chr2 88979294 88979480 -164277103 - L1ME1 LINE L1 -18 6148 5946 1316 125 16 5 chr2 88979558 88979750 -164276833 - AluSx SINE Alu -118 194 1 1932 143 13 10 chr2 88979795 88980096 -164276487 + AluJb SINE Alu 1 302 -10 1138 131 0 38 chr2 88981314 88981497 -164275086 + FRAM SINE Alu 1 176 0 191 250 0 21 chr2 88981521 88981569 -164275014 + MER5B DNA MER1_type 91 137 -41 989 175 0 27 chr2 88982309 88982492 -164274091 - MER5B DNA MER1_type 0 178 1 1829 113 13 179 chr2 88982820 88983288 -164273295 - MLT1B LTR MaLR 0 390 1 708 195 67 46 chr2 88983793 88983988 -164272595 + Charlie4 DNA MER1_type 1 199 -1762 580 239 96 15 chr2 88984155 88984352 -164272231 + Charlie4 DNA MER1_type 1749 1961 0 662 250 57 60 chr2 88984956 88985256 -164271327 - L1MD2 LINE L1 -1 6358 6060 1383 71 0 27 chr2 88986128 88986311 -164270272 - AluY SINE Alu -16 295 118 3772 160 62 23 chr2 88986526 88986806 -164269777 + L1MA10 LINE L1 5557 5825 -509 2000 166 0 3 chr2 88986806 88987114 -164269469 + AluJb SINE Alu 1 307 -5 3772 160 62 23 chr2 88987114 88987418 -164269165 + L1MA10 LINE L1 5825 6179 -155 279 0 0 0 chr2 88987418 88987449 -164269134 + (CA)n Simple_repeat Simple_repeat 2 32 0 3772 160 62 23 chr2 88987449 88987611 -164268972 + L1MA10 LINE L1 6179 6333 -1 2275 109 3 0 chr2 88987852 88988146 -164268437 - AluSx SINE Alu -17 295 1 1015 124 0 0 chr2 88988576 88988713 -164267870 - FRAM SINE Alu -2 174 38 201 121 0 0 chr2 88989836 88989869 -164266714 + (TC)n Simple_repeat Simple_repeat 2 34 0 2416 99 32 0 chr2 88990210 88990554 -164266029 - THE1B LTR MaLR -7 357 3 307 273 122 28 chr2 88990564 88990702 -164265881 - MER5A DNA MER1_type -23 163 6 249 194 0 90 chr2 88990831 88990898 -164265685 - MER116 DNA Mariner -11 69 9 301 324 51 57 chr2 88990914 88991090 -164265493 + MIR SINE MIR 35 209 -53 576 275 161 50 chr2 88991471 88991652 -164264931 + L2 LINE L2 2749 2908 -405 2357 80 10 0 chr2 88991652 88991952 -164264631 - AluSx SINE Alu -9 303 1 576 275 161 50 chr2 88991952 88992269 -164264314 + L2 LINE L2 2908 3313 0 414 244 22 22 chr2 88992822 88992912 -164263671 - FLAM_A SINE Alu -51 91 2 1696 185 116 17 chr2 88992922 88992967 -164263616 - L1MB7 LINE L1 -1 6183 6144 2401 85 0 0 chr2 88992967 88993261 -164263322 - AluSg SINE Alu -16 294 1 1696 185 116 17 chr2 88993261 88993637 -164262946 - L1MB7 LINE L1 -40 6144 5720 231 333 135 28 chr2 88995572 88995713 -164260870 - L3 LINE CR1 -94 1483 1328 1351 179 23 63 chr2 88995897 88995931 -164260652 - MLT1A1 LTR MaLR -2 363 329 2399 105 0 0 chr2 88995931 88996236 -164260347 + AluSx SINE Alu 1 305 -7 1351 179 23 63 chr2 88996236 88996548 -164260035 - MLT1A1 LTR MaLR -36 329 31 338 220 197 60 chr2 88996590 88996649 -164259934 - L1ME4a LINE L1 -25 6096 6046 2120 135 3 3 chr2 88996649 88996960 -164259623 + AluJo SINE Alu 1 311 -1 338 220 197 60 chr2 88996960 88997118 -164259465 - L1ME4a LINE L1 -75 6046 5849 193 277 31 15 chr2 88997862 88997927 -164258656 - MIR SINE MIR -110 152 87 835 185 87 6 chr2 88998533 88998706 -164257877 - MER5A DNA MER1_type -1 188 2 771 130 0 65 chr2 88999457 88999595 -164256988 - FLAM_C SINE Alu 0 133 5 454 325 10 27 chr2 88999929 89000115 -164256468 - MIR SINE MIR -20 242 62 279 225 139 96 chr2 89001911 89002051 -164254532 - MLT1J2 LTR MaLR -33 417 266 677 132 204 0 chr2 89002051 89002203 -164254380 - MER5A DNA MER1_type -2 187 5 279 225 139 96 chr2 89002203 89002249 -164254334 - MLT1J2 LTR MaLR -184 266 223 381 207 0 11 chr2 89002260 89002347 -164254236 - MLT1J2 LTR MaLR -331 119 34 297 365 9 0 chr2 89003014 89003129 -164253454 + L3 LINE CR1 1004 1119 -458 288 330 35 60 chr2 89004088 89004288 -164252295 - MIR SINE MIR -57 205 11 233 175 0 0 chr2 89004415 89004455 -164252128 - MIR SINE MIR -2 260 221 1023 164 0 0 chr2 89004488 89004647 -164251936 - FRAM SINE Alu -17 159 1 249 189 0 108 chr2 89004654 89004728 -164251855 - MIR SINE MIR -120 142 77 2619 52 0 3 chr2 89005186 89005492 -164251091 - AluY SINE Alu -6 305 1 1122 221 70 50 chr2 89006646 89007030 -164249553 - L1M4 LINE L1 -1092 5054 4663 2145 213 35 10 chr2 89007175 89007683 -164248900 + L1MD2 LINE L1 5829 6349 -10 302 254 51 76 chr2 89007813 89007931 -164248652 + L1MC4 LINE L1 7927 8041 -1 228 228 261 33 chr2 89009276 89009368 -164247215 + L2 LINE L2 3159 3271 -1 311 236 157 0 chr2 89010041 89010130 -164246453 - MIR SINE MIR -96 166 64 2230 107 7 0 chr2 89010764 89011053 -164245530 + AluSq SINE Alu 12 302 -11 222 272 128 80 chr2 89011465 89011590 -164244993 + MIR SINE MIR 87 217 -45 1901 138 47 3 chr2 89011595 89011891 -164244692 - AluSx SINE Alu -3 309 1 1522 150 58 51 chr2 89011900 89012194 -164244389 - AluJo SINE Alu -13 299 4 901 131 0 23 chr2 89012611 89012741 -164243842 + FLAM_C SINE Alu 1 127 -16 387 259 0 0 chr2 89012754 89012839 -164243744 + L1MC4 LINE L1 7692 7776 -266 273 67 0 0 chr2 89012839 89012884 -164243699 + HY3 scRNA scRNA 56 100 -1 931 183 64 1 chr2 89012939 89013183 -164243400 + L1MC4 LINE L1 7795 7995 0 1598 82 0 5 chr2 89013457 89013652 -164242931 + AluSx SINE Alu 4 197 -115 946 274 42 12 chr2 89014264 89014505 -164242078 + MIR SINE MIR 5 252 -10 832 200 0 19 chr2 89014515 89014670 -164241913 + AluJb SINE Alu 140 291 -21 191 88 29 0 chr2 89014709 89014743 -164241840 + (CTTG)n Simple_repeat Simple_repeat 2 36 0 2201 136 0 0 chr2 89014746 89015055 -164241528 - AluJb SINE Alu -3 309 1 323 279 44 22 chr2 89015104 89015240 -164241343 - LTR67 LTR ERVL -2 555 417 748 203 8 0 chr2 89015474 89015602 -164240981 - FLAM_A SINE Alu -4 129 1 461 211 179 51 chr2 89015644 89015746 -164240837 + MER5B DNA MER1_type 1 131 -47 856 182 0 0 chr2 89015746 89015878 -164240705 - FLAM_C SINE Alu -1 132 1 461 211 179 51 chr2 89015878 89015931 -164240652 + MER5B DNA MER1_type 131 176 -2 193 315 81 18 chr2 89015949 89016060 -164240523 - MIR SINE MIR -72 190 73 1918 99 43 0 chr2 89016361 89016614 -164239969 + AluSq SINE Alu 26 289 -24 1507 151 35 0 chr2 89017859 89018091 -164238492 + AluJo SINE Alu 66 305 -7 976 206 0 11 chr2 89018691 89018871 -164237712 + MER5B DNA MER1_type 1 178 0 2617 162 73 6 chr2 89018979 89019470 -164237113 - L1MB7 LINE L1 -16 6168 5645 748 104 9 6 chr2 89019470 89019688 -164236895 - Tigger2 DNA MER2_type 0 2718 2468 4412 123 27 56 chr2 89019728 89020126 -164236457 - Tigger2 DNA MER2_type -1960 758 393 2198 122 3 10 chr2 89020126 89020437 -164236146 + AluSx SINE Alu 1 309 -3 4412 123 27 56 chr2 89020437 89020819 -164235764 - Tigger2 DNA MER2_type -2325 393 1 2149 167 6 51 chr2 89020819 89021145 -164235438 - L1MB7 LINE L1 -538 5646 5307 279 0 0 0 chr2 89021145 89021176 -164235407 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1928 127 10 7 chr2 89021178 89021469 -164235114 - AluSx SINE Alu -18 294 3 2149 167 6 51 chr2 89021469 89021841 -164234742 - L1MB7 LINE L1 -878 5306 4962 2349 60 0 7 chr2 89022044 89022342 -164234241 - AluY SINE Alu -15 296 1 2061 119 10 16 chr2 89022655 89023003 -164233580 + AluJo SINE Alu 4 349 0 277 279 203 47 chr2 89023512 89023749 -164232834 - L1MC/D LINE L1 -1932 5876 5678 730 172 9 0 chr2 89023749 89023886 -164232697 - FLAM_A SINE Alu 0 138 1 277 279 203 47 chr2 89023886 89024054 -164232529 - L1MC/D LINE L1 -2130 5678 5405 692 154 0 0 chr2 89024135 89024239 -164232344 + U6 snRNA snRNA 3 106 -1 1667 121 70 15 chr2 89024742 89025014 -164231569 - AluSx SINE Alu -11 301 15 241 241 196 27 chr2 89025854 89025966 -164230617 - L2 LINE L2 -1 3312 3182 203 226 0 57 chr2 89026789 89026842 -164229741 + (TGGG)n Simple_repeat Simple_repeat 2 51 0 1599 124 115 90 chr2 89026863 89027132 -164229451 + MER47A DNA MER2_type 2 284 -2039 2184 75 0 0 chr2 89027132 89027411 -164229172 - AluY SINE Alu -32 279 1 1599 124 115 90 chr2 89027411 89027497 -164229086 + MER47A DNA MER2_type 284 366 0 228 315 86 49 chr2 89027592 89027754 -164228829 - L2 LINE L2 -157 3156 2989 226 206 0 0 chr2 89028795 89028829 -164227754 + Charlie1 DNA MER1_type 1 34 -2727 195 245 38 19 chr2 89028831 89028884 -164227699 + MER5A DNA MER1_type 38 91 -98 188 254 85 17 chr2 89029027 89029086 -164227497 - MER5B DNA MER1_type -44 134 72 690 223 38 90 chr2 89029926 89030137 -164226446 - MIR SINE MIR 0 262 63 444 291 31 41 chr2 89030516 89030712 -164225871 + MIR SINE MIR 62 255 -7 419 275 117 6 chr2 89030922 89031013 -164225570 + Charlie8 DNA MER1_type 20 99 -242 2373 87 0 0 chr2 89031013 89031322 -164225261 + AluSx SINE Alu 1 309 -3 419 275 117 6 chr2 89031322 89031401 -164225182 + Charlie8 DNA MER1_type 99 209 -132 409 279 149 25 chr2 89031466 89031627 -164224956 + MIR SINE MIR 48 228 -34 206 287 210 14 chr2 89031703 89031846 -164224737 - L2 LINE L2 -183 3089 2919 728 212 57 26 chr2 89033733 89033926 -164222657 + L1ME3 LINE L1 5925 6123 -39 218 344 154 1 chr2 89034321 89034509 -164222074 + MIR SINE MIR 39 252 -10 210 108 54 0 chr2 89034961 89034998 -164221585 + G-rich Low_complexity Low_complexity 3 41 0 238 298 82 82 chr2 89035910 89036118 -164220465 - L2 LINE L2 -61 3211 3004 1230 156 29 42 chr2 89036896 89037134 -164219449 - MER46A DNA MER2_type -1 235 1 240 281 190 16 chr2 89037176 89037297 -164219286 + L2 LINE L2 3167 3308 -5 1832 142 7 3 chr2 89037432 89037758 -164218825 - AluJb SINE Alu 0 328 2 1504 168 43 4 chr2 89038085 89038365 -164218218 + AluJo SINE Alu 1 291 -21 397 256 260 20 chr2 89038420 89038775 -164217808 + L1ME LINE L1 5410 5869 -301 848 154 0 22 chr2 89038801 89038937 -164217646 + FLAM_C SINE Alu 1 133 0 775 218 25 73 chr2 89039005 89039280 -164217303 + L1MC4 LINE L1 7781 8042 0 24 32 0 0 chr2 89039555 89039586 -164216997 + AT_rich Low_complexity Low_complexity 1 31 0 1934 107 18 4 chr2 89039586 89039867 -164216716 - AluSc SINE Alu -24 285 1 1622 209 152 124 chr2 89040005 89040586 -164215997 + L1MC5 LINE L1 6611 7174 -787 1811 196 30 38 chr2 89040586 89040985 -164215598 - MSTD LTR MaLR 0 396 1 1622 209 152 124 chr2 89040985 89041263 -164215320 + L1MC5 LINE L1 7174 7443 -518 2056 93 7 0 chr2 89041263 89041581 -164215002 + AluSq SINE Alu 1 320 0 1824 146 7 7 chr2 89041591 89041893 -164214690 + AluJb SINE Alu 1 302 -10 1622 209 152 124 chr2 89041893 89042290 -164214293 + L1MC5 LINE L1 7451 7916 -45 1542 159 85 7 chr2 89042294 89042564 -164214019 - AluJo SINE Alu -21 291 1 525 214 58 132 chr2 89042901 89042999 -164213584 - MIR SINE MIR -37 225 121 14432 58 5 0 chr2 89042999 89045577 -164211006 - L1PA6 LINE L1 -6 6148 3556 525 214 58 132 chr2 89045577 89045721 -164210862 - MIR SINE MIR -141 121 1 1993 129 13 0 chr2 89046918 89047221 -164209362 + AluJo SINE Alu 1 307 -5 1652 171 0 4 chr2 89047342 89047617 -164208966 + AluJb SINE Alu 1 274 -38 225 271 49 74 chr2 89047809 89047931 -164208652 - L2 LINE L2 -419 2895 2777 2314 73 0 19 chr2 89047938 89048254 -164208329 + AluY SINE Alu 1 310 -1 2207 75 0 7 chr2 89048269 89048562 -164208021 + AluSc SINE Alu 1 291 -18 1669 155 3 7 chr2 89048934 89049224 -164207359 + AluJb SINE Alu 5 293 -19 260 222 16 0 chr2 89049308 89049371 -164207212 - L1ME4a LINE L1 -207 5914 5851 411 313 40 55 chr2 89049389 89049548 -164207035 - L1ME4a LINE L1 -359 5762 5607 2150 103 0 3 chr2 89049548 89049839 -164206744 - AluSq SINE Alu -23 290 1 411 313 40 55 chr2 89049839 89049954 -164206629 - L1ME4a LINE L1 -514 5607 5492 467 329 27 0 chr2 89051083 89051229 -164205354 + MIR SINE MIR 88 237 -25 201 243 108 40 chr2 89051585 89051659 -164204924 - L2 LINE L2 0 3313 3235 1801 141 10 7 chr2 89052129 89052434 -164204149 - AluJo SINE Alu -2 310 5 2203 108 0 0 chr2 89052521 89052818 -164203765 - AluSc SINE Alu -12 297 1 1541 221 102 10 chr2 89052856 89053258 -164203325 - L1ME1 LINE L1 -64 6102 5664 2247 101 0 0 chr2 89053331 89053638 -164202945 - AluSc SINE Alu -2 307 1 784 174 0 15 chr2 89054943 89055075 -164201508 + FLAM_C SINE Alu 2 131 -12 1606 158 32 7 chr2 89055082 89055360 -164201223 + AluJo SINE Alu 1 285 -27 490 297 125 35 chr2 89057723 89057979 -164198604 - L2 LINE L2 0 3313 3035 1207 160 5 15 chr2 89057982 89058243 -164198340 - AluSg/x SINE Alu 0 342 84 981 201 90 47 chr2 89058787 89058868 -164197715 - MER33 DNA MER1_type -2263 322 246 2172 99 0 10 chr2 89058868 89059180 -164197403 + AluSx SINE Alu 4 312 0 981 201 90 47 chr2 89059180 89059397 -164197186 - MER33 DNA MER1_type -2339 246 11 222 210 0 111 chr2 89059421 89059502 -164197081 + MIR SINE MIR 109 180 -82 1986 98 23 39 chr2 89059694 89060000 -164196583 + AluSx SINE Alu 1 301 -11 194 222 22 0 chr2 89060506 89060551 -164196032 + L2 LINE L2 3221 3266 -6 2188 105 13 0 chr2 89060644 89060950 -164195633 - AluSq SINE Alu -3 310 1 192 329 0 26 chr2 89062935 89063011 -164193572 - L2 LINE L2 -5 3267 3194 2872 243 118 10 chr2 89063275 89064259 -164192324 - L2 LINE L2 -337 2977 1888 2331 66 0 22 chr2 89064736 89065054 -164191529 + AluY SINE Alu 1 311 0 285 309 16 48 chr2 89065657 89065783 -164190800 - MIR SINE MIR -48 214 93 567 234 119 0 chr2 89067481 89067638 -164188945 - MER5A DNA MER1_type -6 183 4 182 167 0 0 chr2 89068151 89068181 -164188402 + L2 LINE L2 3278 3307 -6 469 253 71 18 chr2 89069035 89069205 -164187378 + MIR SINE MIR 84 262 0 894 187 48 0 chr2 89069306 89069472 -164187111 + MER63B DNA MER1_type 1 174 -262 2224 82 3 0 chr2 89069647 89069940 -164186643 - AluSx SINE Alu -18 294 1 229 247 91 39 chr2 89070682 89070759 -164185824 - MIR SINE MIR -92 116 36 1922 163 0 7 chr2 89070994 89071282 -164185301 + AluJb SINE Alu 1 286 -26 380 294 49 38 chr2 89072941 89073125 -164183458 - MIR SINE MIR -43 219 34 335 300 91 0 chr2 89074135 89074245 -164182338 + L3 LINE CR1 1362 1481 -96 261 157 0 20 chr2 89075859 89075910 -164180673 + L1ME3 LINE L1 6040 6089 -73 2109 102 39 7 chr2 89075912 89076197 -164180386 + AluSx SINE Alu 1 294 -18 1315 170 0 5 chr2 89076219 89076419 -164180164 + AluJo SINE Alu 87 285 -27 30 0 0 0 chr2 89076479 89076509 -164180074 + AT_rich Low_complexity Low_complexity 1 30 0 573 229 48 7 chr2 89077141 89077291 -164179292 + MIR SINE MIR 34 190 -63 381 261 54 0 chr2 89077416 89077527 -164179056 + MER115 DNA AcHobo 9 125 -568 1017 254 165 17 chr2 89077554 89077959 -164178624 + MER115 DNA AcHobo 225 689 -4 238 264 28 14 chr2 89078316 89078388 -164178195 + L2 LINE L2 3235 3307 -6 2032 136 0 23 chr2 89079557 89079866 -164176717 + AluJb SINE Alu 1 302 -10 441 0 0 0 chr2 89080326 89080375 -164176208 + (TG)n Simple_repeat Simple_repeat 1 49 0 1713 140 42 4 chr2 89080812 89081076 -164175507 + AluJo SINE Alu 1 274 -38 836 54 0 54 chr2 89131666 89131737 -164124846 - MER4-int LTR ERV1 -2512 4086 4024 2093 109 7 7 chr2 89131737 89132030 -164124553 - AluSx SINE Alu -19 293 1 836 54 0 54 chr2 89132030 89132087 -164124496 - MER4-int LTR ERV1 -2574 4024 3965 1287 83 33 96 chr2 89132092 89132332 -164124251 - MER4A-int LTR ERV1 -6175 423 199 1526 121 0 0 chr2 89132332 89132547 -164124036 - AluSx SINE Alu -1 309 95 740 143 0 0 chr2 89132550 89132655 -164123928 + AluJb SINE Alu 195 299 -13 707 99 0 0 chr2 89132746 89132837 -164123746 - AluSx SINE Alu -221 92 2 1108 86 149 0 chr2 89132840 89133015 -164123568 - MER4A-int LTR ERV1 -6397 201 1 1501 147 11 76 chr2 89133018 89133392 -164123191 - MER4A LTR ERV1 0 664 257 541 144 21 10 chr2 89133388 89133485 -164123098 - MER4A LTR ERV1 -566 98 1 * 946 154 65 0 chr2 89133803 89133972 -164122611 - AluJb SINE Alu -13 299 120 950 294 72 32 chr2 89134053 89134472 -164122111 - L2 LINE L2 0 3313 2850 2218 91 210 5 chr2 89134472 89134844 -164121739 - LTR7 LTR ERV1 -2 448 1 950 294 72 32 chr2 89134844 89135049 -164121534 - L2 LINE L2 -463 2850 2655 284 298 38 38 chr2 89135061 89135192 -164121391 - MIR3 SINE MIR -39 169 39 208 287 65 83 chr2 89135223 89135331 -164121252 + MER5A DNA MER1_type 18 123 -66 606 121 0 30 chr2 89135596 89135695 -164120888 - AluSg/x SINE Alu -7 302 207 991 229 39 3 chr2 89135807 89136091 -164120492 - AluY SINE Alu -7 294 1 378 256 135 0 chr2 89138587 89138720 -164117863 - MIR SINE MIR -105 157 7 953 211 39 34 chr2 89139363 89139571 -164117012 - MER3 DNA MER1_type 0 209 1 349 283 0 20 chr2 89139624 89139723 -164116860 + MIR SINE MIR 45 141 -121 682 176 123 53 chr2 89139748 89139918 -164116665 + MER68 LTR ERV1 1 182 -380 675 130 78 0 chr2 89139918 89140033 -164116550 + AluJb SINE Alu 2 125 -187 1734 227 31 16 chr2 89140059 89140447 -164116136 + MER68 LTR ERV1 161 554 -8 2261 97 0 16 chr2 89140510 89140818 -164115765 - AluSx SINE Alu -9 303 1 387 295 19 0 chr2 89140859 89140964 -164115619 + MIR SINE MIR 156 262 0 2179 80 7 27 chr2 89141185 89141484 -164115099 - AluSp SINE Alu -20 293 1 803 134 0 0 chr2 89141514 89141626 -164114957 + AluSq/x SINE Alu 2 113 -199 1570 101 9 0 chr2 89141726 89141943 -164114640 + AluY SINE Alu 83 301 -10 1956 145 0 0 chr2 89142572 89142869 -164113714 - AluJb SINE Alu -15 297 1 2098 103 20 3 chr2 89143097 89143397 -164113186 - AluSx SINE Alu -7 305 1 218 348 0 0 chr2 89143703 89143772 -164112811 - MIR SINE MIR -58 150 82 1250 150 0 35 chr2 89145716 89145942 -164110641 - AluJb SINE Alu -9 303 86 902 167 61 11 chr2 89146745 89146925 -164109658 + MER5A DNA MER1_type 1 189 0 2026 96 22 0 chr2 89146968 89147265 -164109318 + AluSx SINE Alu 9 311 0 655 141 15 82 chr2 89147283 89147418 -164109165 + FLAM_C SINE Alu 13 138 -5 296 309 44 22 chr2 89148383 89148519 -164108064 + MER91A DNA MER1_type 1 139 -57 695 171 0 0 chr2 89149024 89149129 -164107454 - AluJb SINE Alu -12 300 196 2255 85 3 0 chr2 89149229 89149524 -164107059 - AluSp SINE Alu -16 297 2 467 278 77 26 chr2 89149525 89149719 -164106864 + L2 LINE L2 3109 3312 -1 295 235 165 26 chr2 89151777 89151892 -164104691 - MIR3 SINE MIR -65 143 13 1878 238 43 58 chr2 89151902 89151959 -164104624 + L1M4 LINE L1 3129 3185 -2961 1983 138 3 0 chr2 89151959 89152250 -164104333 - AluSx SINE Alu -20 292 1 2187 109 0 0 chr2 89152260 89152554 -164104029 - AluSx SINE Alu -17 295 2 1878 238 43 58 chr2 89152554 89153091 -164103492 + L1M4 LINE L1 3194 3738 -2408 2257 115 0 0 chr2 89153091 89153395 -164103188 + AluSg SINE Alu 1 304 -6 1878 238 43 58 chr2 89153395 89153469 -164103114 + L1M4 LINE L1 3738 3812 -2334 1188 129 8 76 chr2 89153469 89153732 -164102851 + L1MA6 LINE L1 6056 6300 0 1878 238 43 58 chr2 89153732 89153894 -164102689 + L1M4 LINE L1 3812 3959 -2187 932 174 0 78 chr2 89153898 89153953 -164102630 + AluJo SINE Alu 87 145 -167 2242 82 3 0 chr2 89153953 89154263 -164102320 + AluSg SINE Alu 1 311 0 932 174 0 78 chr2 89154263 89154436 -164102147 + AluJo SINE Alu 145 298 -14 318 194 45 15 chr2 89154450 89154517 -164102066 + L1M4 LINE L1 3962 4030 -2116 180 236 14 56 chr2 89154552 89154624 -164101959 + L2 LINE L2 2156 2224 -1090 21 57 0 0 chr2 89154703 89154738 -164101845 + AT_rich Low_complexity Low_complexity 1 35 0 784 99 0 6 chr2 89155504 89155758 -164100825 + AluSx SINE Alu 1 302 -8 224 208 0 0 chr2 89155763 89155811 -164100772 + MER5B DNA MER1_type 16 63 -115 886 131 28 7 chr2 89155811 89155956 -164100627 + MER31A LTR ERV1 1 148 -337 1923 144 7 3 chr2 89156084 89156382 -164100201 - AluSx SINE Alu -11 301 3 263 365 0 10 chr2 89156412 89156508 -164100075 - MER5A DNA MER1_type -67 122 28 261 111 22 22 chr2 89156540 89156585 -164099998 + MER5B DNA MER1_type 20 64 -114 2058 139 0 0 chr2 89156585 89156887 -164099696 + AluSx SINE Alu 1 302 -10 345 331 48 8 chr2 89156911 89157035 -164099548 + MER5B DNA MER1_type 50 178 0 1968 122 4 0 chr2 89157215 89157493 -164099090 + AluSx SINE Alu 1 279 -33 378 0 0 0 chr2 89157493 89157535 -164099048 + (CA)n Simple_repeat Simple_repeat 1 42 0 364 253 116 0 chr2 89158070 89158165 -164098418 - L3 LINE CR1 -65 1512 1407 201 315 206 7 chr2 89158189 89158335 -164098248 + L2 LINE L2 3097 3271 -1 1770 157 26 7 chr2 89160001 89160307 -164096276 - AluJo SINE Alu 0 312 1 255 301 43 0 chr2 89160516 89160609 -164095974 - MIR3 SINE MIR -35 173 77 2075 119 0 0 chr2 89160931 89161226 -164095357 + AluSx SINE Alu 1 295 -17 2162 77 0 7 chr2 89161382 89161693 -164094890 + AluSg SINE Alu 1 309 0 1149 65 24 18 chr2 89161702 89161870 -164094713 + L1PA13 LINE L1 5995 6163 0 207 222 139 28 chr2 89161965 89162037 -164094546 + MIR SINE MIR 69 148 -114 2314 86 0 9 chr2 89162449 89162764 -164093819 + AluSq SINE Alu 1 312 -1 320 250 0 48 chr2 89163477 89163581 -164093002 - MIR SINE MIR -105 157 59 1916 138 0 7 chr2 89163581 89163878 -164092705 - AluJb SINE Alu -13 299 5 186 241 72 48 chr2 89164291 89164374 -164092209 + L2 LINE L2 2978 3062 -210 593 171 33 1 chr2 89164556 89164711 -164091872 - L1ME2 LINE L1 -2 6160 6006 295 306 54 9 chr2 89164718 89164829 -164091754 + L2 LINE L2 3156 3271 -1 279 287 31 54 chr2 89164855 89164984 -164091599 + MIR SINE MIR 66 191 -71 1038 155 0 11 chr2 89164992 89165166 -164091417 - FRAM SINE Alu -4 172 1 286 167 152 0 chr2 89165477 89165543 -164091040 + MIR3 SINE MIR 109 184 -24 2020 105 10 16 chr2 89165658 89165963 -164090620 - AluSx SINE Alu -9 303 1 678 239 82 49 chr2 89166328 89166571 -164090012 - MIR SINE MIR -1 261 11 2343 84 0 3 chr2 89166626 89166934 -164089649 - AluSx SINE Alu -5 307 1 231 161 0 0 chr2 89167746 89167802 -164088781 + (CA)n Simple_repeat Simple_repeat 2 57 0 243 0 0 0 chr2 89169239 89169266 -164087317 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2063 74 0 51 chr2 89169268 89169564 -164087019 - AluSx SINE Alu -29 283 3 481 292 119 45 chr2 89170666 89171019 -164085564 - L2 LINE L2 -11 3261 2883 195 129 0 0 chr2 89171297 89171328 -164085255 + (T)n Simple_repeat Simple_repeat 1 31 0 912 145 0 41 chr2 89171360 89171505 -164085078 + FLAM_C SINE Alu 1 139 -4 233 326 112 11 chr2 89171616 89171794 -164084789 - L2 LINE L2 -407 2907 2712 2343 110 0 0 chr2 89172024 89172334 -164084249 - AluSq SINE Alu -3 310 1 2087 134 3 31 chr2 89172357 89172678 -164083905 - AluSx SINE Alu 0 312 1 200 167 0 0 chr2 89173528 89173558 -164083025 + polypyrimidine Low_complexity Low_complexity 4 33 0 28 0 0 0 chr2 89173585 89173613 -164082970 + AT_rich Low_complexity Low_complexity 1 28 0 1684 167 0 61 chr2 89173613 89173924 -164082659 + AluJo SINE Alu 1 292 -20 2230 104 0 0 chr2 89173931 89174237 -164082346 + AluSg SINE Alu 1 306 0 2123 107 13 25 chr2 89174395 89174712 -164081871 - AluSq SINE Alu 0 313 1 597 250 146 36 chr2 89174715 89175192 -164081391 - LTR67 LTR ERVL -8 549 4 1337 135 37 20 chr2 89175429 89175673 -164080910 + MER21A LTR ERV1 17 264 -667 2614 125 55 77 chr2 89175678 89176247 -164080336 + MER21A LTR ERV1 376 931 0 226 263 13 26 chr2 89176417 89176493 -164080090 + L1ME LINE L1 5623 5697 -424 725 254 15 46 chr2 89177432 89177538 -164079045 + MIR SINE MIR 18 117 -145 1773 184 47 21 chr2 89177538 89177918 -164078665 + MLT1B LTR MaLR 1 390 0 725 254 15 46 chr2 89177918 89178008 -164078575 + MIR SINE MIR 117 208 -54 353 326 0 11 chr2 89178012 89178101 -164078482 + L2 LINE L2 3226 3313 0 208 137 20 39 chr2 89178768 89178819 -164077764 + CT-rich Low_complexity Low_complexity 5 54 0 5248 123 115 79 chr2 89179437 89180971 -164075612 + pTR5 LTR ERV1 743 2438 0 2218 105 3 0 chr2 89181025 89181341 -164075242 + AluSx SINE Alu 1 317 0 489 149 0 64 chr2 89181355 89181449 -164075134 + HY4 scRNA scRNA 2 89 -4 224 269 69 39 chr2 89181451 89181581 -164075002 + L2 LINE L2 2699 2832 -482 2143 124 7 19 chr2 89181709 89182016 -164074567 - AluSx SINE Alu -9 303 1 1550 169 47 27 chr2 89182025 89182326 -164074257 - AluJb SINE Alu 0 312 6 294 86 0 86 chr2 89182534 89182592 -164073991 + Alu SINE Alu 250 302 0 2040 123 21 0 chr2 89182803 89183088 -164073495 + AluSx SINE Alu 1 291 -21 187 277 41 100 chr2 89183188 89183293 -164073290 + L2 LINE L2 2830 2917 -355 446 86 129 0 chr2 89183293 89183363 -164073220 - MADE1 DNA Mariner 0 80 2 187 277 41 100 chr2 89183363 89183477 -164073106 + L2 LINE L2 2917 3036 -236 1852 108 20 0 chr2 89183624 89183875 -164072708 + AluSp SINE Alu 1 256 -57 1514 135 101 12 chr2 89183883 89184210 -164072373 - L1MA4 LINE L1 -3 6297 5942 993 126 7 0 chr2 89184210 89184353 -164072230 + FRAM SINE Alu 25 168 -8 700 131 0 0 chr2 89184354 89184453 -164072130 - AluJo/FLAM SINE Alu -195 117 19 1909 112 13 63 chr2 89184453 89184564 -164072019 - L1MA4 LINE L1 -614 5686 5571 845 145 0 8 chr2 89184564 89184695 -164071888 - FLAM_C SINE Alu -3 130 1 1909 112 13 63 chr2 89184695 89184966 -164071617 - L1MA4 LINE L1 -729 5571 5323 1190 160 55 27 chr2 89184968 89185187 -164071396 - AluSg/x SINE Alu -4 308 84 738 141 67 0 chr2 89185210 89185345 -164071238 - L1MA4 LINE L1 -864 5282 5139 1949 158 0 0 chr2 89188569 89188866 -164067717 + AluJo SINE Alu 1 297 -15 390 304 52 58 chr2 89189617 89189808 -164066775 - MIR3 SINE MIR -18 190 1 334 244 177 85 chr2 89189805 89189908 -164066675 - MER5A DNA MER1_type 0 189 64 * 2384 87 10 0 chr2 89189908 89190206 -164066377 - AluSp SINE Alu -12 301 1 334 244 177 85 chr2 89190206 89190266 -164066317 - MER5A DNA MER1_type -125 64 11 2158 123 3 0 chr2 89190762 89191062 -164065521 - AluSx SINE Alu -11 301 1 1354 130 62 14 chr2 89191222 89191430 -164065153 + AluSg/x SINE Alu 77 294 -16 2492 69 3 0 chr2 89194937 89195241 -164061342 + AluSc SINE Alu 1 305 -4 21 36 0 0 chr2 89196229 89196257 -164060326 + AT_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr2 89196397 89196417 -164060166 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2386 80 7 0 chr2 89196419 89196706 -164059877 - AluSc SINE Alu -20 289 1 25 0 0 0 chr2 89196706 89196731 -164059852 + AT_rich Low_complexity Low_complexity 1 25 0 2015 129 13 19 chr2 89200172 89200482 -164056101 - AluSx SINE Alu -4 308 1 525 169 7 29 chr2 89200862 89200918 -164055665 + Tigger3(Golem) DNA MER2_type 175 231 -2798 2174 89 17 3 chr2 89200918 89201209 -164055374 - AluSq SINE Alu -18 295 1 525 169 7 29 chr2 89201209 89201288 -164055295 + Tigger3(Golem) DNA MER2_type 231 307 -2722 2032 100 4 0 chr2 89201391 89201650 -164054933 - AluY SINE Alu -51 260 1 2612 66 0 0 chr2 89201667 89201972 -164054611 - AluY SINE Alu -6 305 1 15312 99 43 20 chr2 89201973 89202983 -164053600 + MER4A-int LTR ERV1 4080 5065 -1533 2013 142 7 3 chr2 89202983 89203286 -164053297 + AluSx SINE Alu 1 304 -8 15312 99 43 20 chr2 89203286 89204303 -164052280 + MER4A-int LTR ERV1 5065 6176 -422 2200 84 11 18 chr2 89204303 89204616 -164051967 + AluSg SINE Alu 1 311 0 15312 99 43 20 chr2 89204616 89205047 -164051536 + MER4A-int LTR ERV1 6176 6596 -2 607 103 21 10 chr2 89205055 89205152 -164051431 + MER4A LTR ERV1 1 98 -566 1559 123 186 80 chr2 89205152 89205517 -164051066 + MER4A LTR ERV1 261 664 0 4589 70 5 0 chr2 89205518 89206106 -164050477 + LTR10C LTR ERV1 1 591 0 415 310 9 9 chr2 89206108 89206224 -164050359 - MIR SINE MIR -109 153 38 181 385 0 13 chr2 89206669 89206747 -164049836 + L2 LINE L2 2622 2698 -616 2379 206 73 34 chr2 89206747 89207671 -164048912 + L1MDa LINE L1 1 1188 -5352 1957 186 66 45 chr2 89207671 89208156 -164048427 + MLT1D LTR MaLR 2 496 -9 3370 175 69 82 chr2 89208176 89208711 -164047872 + L1MDa LINE L1 1196 1736 -4804 1874 97 109 8 chr2 89208711 89208978 -164047605 - AluSg SINE Alu -16 294 1 1802 154 0 56 chr2 89208988 89209166 -164047417 - AluJo SINE Alu -22 290 135 2227 132 0 0 chr2 89209166 89209461 -164047122 + AluSx SINE Alu 1 295 -17 1802 154 0 56 chr2 89209461 89209588 -164046995 - AluJo SINE Alu -177 135 2 3370 175 69 82 chr2 89209588 89209942 -164046641 + L1MDa LINE L1 1745 2102 -4438 2331 111 0 0 chr2 89209942 89210249 -164046334 - AluSg SINE Alu -3 307 1 3370 175 69 82 chr2 89210249 89210294 -164046289 + L1MDa LINE L1 2102 2146 -4394 348 167 33 0 chr2 89210294 89210354 -164046229 + U7 snRNA snRNA 2 63 0 3370 175 69 82 chr2 89210354 89210479 -164046104 + L1MDa LINE L1 2146 2254 -4286 2056 133 13 13 chr2 89210527 89210835 -164045748 - AluSx SINE Alu -4 308 1 2395 107 0 0 chr2 89210891 89211200 -164045383 - AluSx SINE Alu -3 309 1 25 51 0 0 chr2 89211272 89211311 -164045272 + AT_rich Low_complexity Low_complexity 1 39 0 458 268 187 10 chr2 89211339 89211461 -164045122 + L2 LINE L2 2729 2828 -486 2092 108 10 30 chr2 89211461 89211616 -164044967 - AluSx SINE Alu -21 291 143 2200 120 0 0 chr2 89211616 89211915 -164044668 - AluSg SINE Alu -7 303 5 2092 108 10 30 chr2 89211915 89212056 -164044527 - AluSx SINE Alu -169 143 1 458 268 187 10 chr2 89212056 89212142 -164044441 + L2 LINE L2 2828 2974 -340 759 178 99 20 chr2 89213370 89213522 -164043061 - FRAM SINE Alu -12 164 1 232 256 44 22 chr2 89214104 89214194 -164042389 - L2 LINE L2 -2 3270 3179 213 258 121 0 chr2 89214661 89214727 -164041856 - MER91A DNA MER1_type -120 76 3 2238 138 0 0 chr2 89215212 89215523 -164041060 - 7SLRNA srpRNA srpRNA -9 311 1 283 261 72 65 chr2 89215533 89215595 -164040988 + L2 LINE L2 2652 2712 -602 2487 69 7 0 chr2 89215595 89215898 -164040685 + AluY SINE Alu 1 305 -6 283 261 72 65 chr2 89215898 89215973 -164040610 + L2 LINE L2 2712 2790 -524 777 79 0 0 chr2 89216119 89216220 -164040363 - HY3 scRNA scRNA 0 101 1 301 238 50 0 chr2 89216220 89216300 -164040283 + Tigger5 DNA MER2_type 2240 2323 0 633 272 124 70 chr2 89216308 89216694 -164039889 + L2 LINE L2 2852 3258 -14 189 0 0 0 chr2 89216694 89216715 -164039868 + (TGAA)n Simple_repeat Simple_repeat 4 24 0 437 198 147 70 chr2 89217086 89217243 -164039340 + MIR SINE MIR 2 170 -92 2208 99 3 43 chr2 89217534 89217838 -164038745 + AluSq SINE Alu 1 292 -21 887 117 0 0 chr2 89218425 89218553 -164038030 - AluSg/x SINE Alu 0 312 185 612 91 0 0 chr2 89218574 89218651 -164037932 - Alu SINE Alu -231 78 2 23 33 0 0 chr2 89218655 89218685 -164037898 + AT_rich Low_complexity Low_complexity 1 30 0 1530 154 120 11 chr2 89218713 89218979 -164037604 + AluJo SINE Alu 18 312 0 24 77 0 0 chr2 89218979 89219031 -164037552 + AT_rich Low_complexity Low_complexity 1 52 0 807 172 147 59 chr2 89219173 89219207 -164037376 + AluJo SINE Alu 83 113 -199 2207 113 3 0 chr2 89219207 89219498 -164037085 - AluSg SINE Alu -16 294 3 807 172 147 59 chr2 89219498 89219667 -164036916 + AluJo SINE Alu 113 304 -8 1202 126 0 44 chr2 89219698 89219851 -164036732 - AluSg/x SINE Alu -53 259 114 2214 128 42 25 chr2 89219851 89220209 -164036374 + THE1B LTR MaLR 1 364 0 1202 126 0 44 chr2 89220209 89220238 -164036345 - AluSg/x SINE Alu -198 114 85 327 284 243 47 chr2 89220328 89220501 -164036082 - MIR SINE MIR -42 220 16 2183 130 3 0 chr2 89220856 89221156 -164035427 - AluSx SINE Alu 0 312 12 241 269 141 0 chr2 89221405 89221483 -164035100 + L2 LINE L2 3145 3233 -39 2413 60 18 33 chr2 89221692 89221855 -164034728 - L1PA13 LINE L1 0 6163 5999 2605 50 0 7 chr2 89221855 89222156 -164034427 - AluY SINE Alu -12 299 1 2413 60 18 33 chr2 89222156 89222327 -164034256 - L1PA13 LINE L1 -164 5999 5834 882 118 7 37 chr2 89222687 89222823 -164033760 + AluJo SINE Alu 3 134 -178 413 88 0 0 chr2 89222824 89222881 -164033702 + U3 snRNA snRNA 19 75 -142 2148 128 0 7 chr2 89223149 89223453 -164033130 + AluSx SINE Alu 1 302 -10 1112 188 147 8 chr2 89223770 89224015 -164032568 - AluJo SINE Alu -23 289 11 842 257 127 52 chr2 89224025 89224071 -164032512 + L1MC4a LINE L1 5361 5402 -2406 222 91 0 0 chr2 89224071 89224104 -164032479 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 2264 87 0 68 chr2 89224112 89224434 -164032149 + AluSx SINE Alu 3 302 -10 842 257 127 52 chr2 89224434 89224899 -164031684 + L1MC4a LINE L1 5408 5920 -1888 2314 116 3 0 chr2 89225532 89225834 -164030749 - AluSx SINE Alu -1 311 9 2394 88 0 0 chr2 89226944 89227239 -164029344 - AluSg SINE Alu -15 295 1 338 231 58 58 chr2 89228767 89228871 -164027712 - MIR SINE MIR -86 122 19 193 162 0 54 chr2 89229595 89229632 -164026951 + MIR SINE MIR 115 149 -59 229 327 0 0 chr2 89230227 89230282 -164026301 + MIR SINE MIR 44 98 -110 558 257 84 17 chr2 89230312 89230389 -164026194 - MER112 DNA MER1_type 0 260 190 1928 108 79 0 chr2 89230389 89230666 -164025917 - AluSx SINE Alu -13 299 1 558 257 84 17 chr2 89230666 89230825 -164025758 - MER112 DNA MER1_type -70 190 8 1884 151 7 13 chr2 89231163 89231290 -164025293 + AluJo SINE Alu 6 132 -180 2398 68 0 43 chr2 89231290 89231614 -164024969 + AluY SINE Alu 1 310 -1 1884 151 7 13 chr2 89231614 89231784 -164024799 + AluJo SINE Alu 132 301 -11 1804 147 6 48 chr2 89232282 89232596 -164023987 - AluSx SINE Alu -11 301 1 920 167 0 0 chr2 89234651 89234789 -164021794 + FLAM_C SINE Alu 1 138 -5 2431 103 0 0 chr2 89234792 89235102 -164021481 + AluSg SINE Alu 1 310 0 28 29 0 0 chr2 89235131 89235166 -164021417 + AT_rich Low_complexity Low_complexity 1 35 0 266 333 52 15 chr2 89236246 89236381 -164020202 - L2 LINE L2 -728 2586 2447 228 265 73 0 chr2 89236405 89236473 -164020110 - MER94 DNA DNA -34 100 28 384 273 48 38 chr2 89238100 89238262 -164018321 + MER5B DNA MER1_type 13 186 -3 31 0 0 0 chr2 89238624 89238655 -164017928 + AT_rich Low_complexity Low_complexity 1 31 0 347 283 94 50 chr2 89238712 89238892 -164017691 - L1ME4a LINE L1 -69 6052 5865 482 267 131 11 chr2 89239019 89239210 -164017373 - L1ME4a LINE L1 -393 5728 5515 339 231 56 69 chr2 89239714 89239874 -164016709 + MIR3 SINE MIR 33 190 -18 2324 88 34 0 chr2 89239899 89240194 -164016389 + AluSx SINE Alu 1 305 -7 2355 103 3 3 chr2 89240208 89240508 -164016075 + AluSx SINE Alu 1 300 -12 613 207 131 7 chr2 89240534 89240679 -164015904 + MIR SINE MIR 90 252 -10 1887 78 118 11 chr2 89241312 89241582 -164015001 - AluSg SINE Alu -11 299 1 264 118 132 15 chr2 89242084 89242152 -164014431 + MER113 DNA MER1_type? 39 114 -407 315 267 11 44 chr2 89242229 89242319 -164014264 - L1MC4 LINE L1 -1337 6705 6619 807 87 102 47 chr2 89242320 89242447 -164014136 - AluJb SINE Alu -178 134 1 24 53 0 0 chr2 89242459 89242497 -164014086 + AT_rich Low_complexity Low_complexity 1 38 0 501 328 66 0 chr2 89243322 89243505 -164013078 + MER117 DNA MER1_type 1 195 -2 1928 125 3 27 chr2 89243528 89243823 -164012760 - AluJo SINE Alu -11 301 14 2096 132 0 0 chr2 89243954 89244250 -164012333 - AluSg SINE Alu -14 296 1 227 204 0 0 chr2 89244377 89244421 -164012162 + L2 LINE L2 3005 3048 -224 226 277 76 17 chr2 89245163 89245282 -164011301 - HAL1b LINE L1 -10 1338 1213 1709 177 0 7 chr2 89245350 89245632 -164010951 + AluJo SINE Alu 1 280 -32 189 154 0 0 chr2 89245632 89245671 -164010912 + (CAAT)n Simple_repeat Simple_repeat 2 40 0 610 306 103 21 chr2 89246264 89246555 -164010028 + L1MC/D LINE L1 5393 5707 -2101 649 197 124 36 chr2 89247420 89247613 -164008970 - MER63A DNA MER1_type 0 210 1 292 251 184 11 chr2 89247789 89247914 -164008669 - MIR SINE MIR -63 145 36 206 234 172 47 chr2 89248000 89248128 -164008455 - MIR3 SINE MIR -42 166 23 2085 138 0 7 chr2 89248473 89248778 -164007805 + AluJb SINE Alu 1 303 -9 197 234 81 63 chr2 89249385 89249496 -164007087 + L2 LINE L2 2635 2747 -567 181 269 39 0 chr2 89249476 89249528 -164007055 + L3 LINE CR1 1438 1491 -86 * 186 108 108 0 chr2 89249505 89249542 -164007041 - MIR3 SINE MIR -53 155 115 267 310 82 46 chr2 89251168 89251497 -164005086 + L1M4 LINE L1 3652 3992 -2154 833 130 0 36 chr2 89252117 89252255 -164004328 + FLAM_C SINE Alu 1 133 0 203 128 179 0 chr2 89252917 89252956 -164003627 - L2 LINE L2 -80 3233 3188 759 167 91 99 chr2 89252980 89253201 -164003382 + MER20 DNA MER1_type 1 219 0 224 275 93 83 chr2 89253770 89253861 -164002722 + MIR SINE MIR 28 117 -145 2386 93 3 3 chr2 89253861 89254161 -164002422 - AluSx SINE Alu -12 300 1 224 275 93 83 chr2 89254161 89254262 -164002321 + MIR SINE MIR 117 222 -40 2270 123 0 0 chr2 89254824 89255125 -164001458 - AluSx SINE Alu -11 301 1 473 329 78 9 chr2 89255314 89255533 -164001050 - MIR SINE MIR 0 262 29 441 0 0 0 chr2 89255631 89255680 -164000903 + (TG)n Simple_repeat Simple_repeat 2 50 0 2445 87 0 0 chr2 89256837 89257146 -163999437 - AluY SINE Alu -2 309 1 205 290 130 0 chr2 89257493 89257562 -163999021 - MIR3 SINE MIR -7 201 124 261 185 22 76 chr2 89257614 89257706 -163998877 - L1MC5 LINE L1 -27 7934 7848 2554 48 0 0 chr2 89257788 89258081 -163998502 + AluY SINE Alu 1 293 -18 2304 103 7 0 chr2 89258745 89259045 -163997538 + AluSp SINE Alu 1 302 -11 1246 112 0 12 chr2 89259047 89259217 -163997366 + AluSg/x SINE Alu 141 308 -4 1514 176 86 18 chr2 89259229 89259348 -163997235 + AluJo SINE Alu 1 110 -202 2226 93 7 0 chr2 89259348 89259628 -163996955 - AluSp SINE Alu -31 282 1 1514 176 86 18 chr2 89259628 89259787 -163996796 + AluJo SINE Alu 110 298 -14 744 287 18 22 chr2 89260648 89260895 -163995688 + MIR SINE MIR 22 262 0 490 200 50 0 chr2 89261077 89261177 -163995406 - MER5B DNA MER1_type -73 105 1 311 234 226 16 chr2 89261928 89262052 -163994531 - L1ME4a LINE L1 -1 6120 5971 288 0 0 0 chr2 89262055 89262087 -163994496 + (TG)n Simple_repeat Simple_repeat 2 33 0 2073 115 17 7 chr2 89262512 89262807 -163993776 - AluSq SINE Alu -15 298 1 2336 95 0 10 chr2 89262810 89263114 -163993469 - AluSx SINE Alu -11 301 1 780 176 0 0 chr2 89263190 89263309 -163993274 - FLAM_C SINE Alu -14 119 1 435 209 52 17 chr2 89263315 89263430 -163993153 - L1ME1 LINE L1 -6 6160 6042 355 257 117 29 chr2 89263490 89263661 -163992922 - MLT2D LTR ERVL -7 407 222 255 224 17 112 chr2 89263662 89263778 -163992805 - MLT-int LTR MaLR -353 1382 1278 269 254 0 0 chr2 89263872 89263935 -163992648 - MLT1H-int LTR MaLR -484 887 825 * 2238 178 47 2 chr2 89263927 89264354 -163992229 - MLT1H-int LTR MaLR -662 709 264 823 158 0 14 chr2 89264401 89264540 -163992043 - AluSp/q SINE Alu -2 311 175 1583 188 33 0 chr2 89264542 89264818 -163991765 - AluJo SINE Alu -6 306 22 1974 162 0 3 chr2 89265071 89265374 -163991209 - AluJb SINE Alu -10 302 1 229 218 149 35 chr2 89265394 89265481 -163991102 - MLT1H LTR MaLR -13 529 433 256 188 171 82 chr2 89265498 89265668 -163990915 - MLT1H LTR MaLR -232 317 133 2766 143 9 9 chr2 89265668 89266095 -163990488 + MSTA LTR MaLR 1 427 -1 533 220 59 86 chr2 89266410 89266530 -163990053 - MER5A DNA MER1_type -2 187 72 2559 77 0 0 chr2 89266530 89266841 -163989742 - AluY SINE Alu 0 311 1 533 220 59 86 chr2 89266841 89266906 -163989677 - MER5A DNA MER1_type -117 72 7 * 648 167 24 32 chr2 89266887 89267013 -163989570 - MER5A DNA MER1_type -64 125 1 2045 132 14 3 chr2 89267256 89267545 -163989038 + AluJb SINE Alu 1 292 -20 2313 84 3 0 chr2 89267693 89268006 -163988577 - AluSp SINE Alu 0 314 1 2792 235 45 29 chr2 89268008 89268112 -163988471 - L1MC4 LINE L1 -6 8036 7935 186 43 0 0 chr2 89268112 89268135 -163988448 + (TC)n Simple_repeat Simple_repeat 2 24 0 2792 235 45 29 chr2 89268135 89268276 -163988307 - L1MC4 LINE L1 -107 7935 7798 2363 107 7 0 chr2 89268276 89268585 -163987998 - AluSx SINE Alu -1 311 1 2792 235 45 29 chr2 89268585 89269165 -163987418 - L1MC4 LINE L1 -244 7798 7197 608 322 81 43 chr2 89269295 89269692 -163986891 + HAL1b LINE L1 92 503 -845 302 264 91 70 chr2 89269873 89270051 -163986532 + L2 LINE L2 2833 3023 -290 1252 175 163 4 chr2 89270051 89270302 -163986281 + AluJo SINE Alu 1 291 -11 302 264 91 70 chr2 89270302 89270453 -163986130 + L2 LINE L2 3023 3169 -144 1474 95 0 0 chr2 89270457 89270646 -163985937 - AluSg/x SINE Alu -4 306 118 604 62 0 0 chr2 89270646 89270727 -163985856 + Alu SINE Alu 227 307 -2 2389 65 31 0 chr2 89270732 89271022 -163985561 + AluSc SINE Alu 1 299 -10 596 39 26 0 chr2 89271559 89271637 -163984946 - MADE1 DNA Mariner 0 80 1 2290 100 0 10 chr2 89271788 89272087 -163984496 + AluSx SINE Alu 1 296 -16 1893 138 29 0 chr2 89272105 89272381 -163984202 + AluJb SINE Alu 1 284 -28 612 0 0 0 chr2 89272381 89272449 -163984134 + (CA)n Simple_repeat Simple_repeat 2 69 0 347 238 76 35 chr2 89272609 89272782 -163983801 - L1ME4a LINE L1 -18 6103 5927 2238 105 0 16 chr2 89273311 89273624 -163982959 - AluSx SINE Alu -4 308 1 462 262 101 13 chr2 89273783 89273932 -163982651 + MIR SINE MIR 34 195 -67 2090 101 0 7 chr2 89274388 89274698 -163981885 + AluSx SINE Alu 1 308 0 190 289 124 46 chr2 89275231 89275425 -163981158 + MIR SINE MIR 31 239 -23 1516 147 51 22 chr2 89275576 89275869 -163980714 - AluJb SINE Alu 0 301 1 186 43 0 0 chr2 89275878 89275901 -163980682 + (T)n Simple_repeat Simple_repeat 1 23 0 373 180 0 0 chr2 89277159 89277220 -163979363 - Tigger5 DNA MER2_type 0 2323 2263 331 203 14 0 chr2 89277222 89277291 -163979292 + Tigger5 DNA MER2_type 2248 2317 -6 289 154 0 0 chr2 89277293 89277345 -163979238 - Tigger5 DNA MER2_type -2244 79 28 305 314 36 21 chr2 89278189 89278329 -163978254 - MIR3 SINE MIR -21 187 46 2260 56 0 14 chr2 89279188 89279508 -163977075 - AluY SINE Alu 0 316 1 197 284 54 0 chr2 89280418 89280492 -163976091 - MIR SINE MIR -86 122 45 748 194 0 12 chr2 89280897 89281149 -163975434 + CT-rich Low_complexity Low_complexity 1 248 0 942 167 14 100 chr2 89283298 89283371 -163973212 - L1MB8 LINE L1 0 6178 6100 1568 186 0 30 chr2 89283371 89283672 -163972911 + AluJo SINE Alu 1 292 -20 942 167 14 100 chr2 89283672 89283685 -163972898 - L1MB8 LINE L1 -78 6100 6087 2333 88 0 0 chr2 89283685 89283982 -163972601 + AluSx SINE Alu 1 297 -15 942 167 14 100 chr2 89283982 89284175 -163972408 - L1MB8 LINE L1 -91 6087 5922 3047 111 141 38 chr2 89284175 89284414 -163972169 - Tigger3(Golem) DNA MER2_type 0 3028 2815 2010 108 3 69 chr2 89284414 89284747 -163971836 + AluSx SINE Alu 1 311 -1 3047 111 141 38 chr2 89284747 89284782 -163971801 - Tigger3(Golem) DNA MER2_type -213 2815 2785 2216 112 0 0 chr2 89284782 89285095 -163971488 + AluSq SINE Alu 1 313 0 3047 111 141 38 chr2 89285095 89285406 -163971177 - Tigger3(Golem) DNA MER2_type -243 2785 2370 1863 126 34 3 chr2 89285406 89285700 -163970883 + AluSq SINE Alu 1 303 -10 3047 111 141 38 chr2 89285700 89285744 -163970839 - Tigger3(Golem) DNA MER2_type -658 2370 2332 2641 10 0 13 chr2 89285747 89286056 -163970527 + AluYa5 SINE Alu 1 305 -6 282 148 0 0 chr2 89286918 89286972 -163969611 + (GGGA)n Simple_repeat Simple_repeat 4 57 0 189 107 0 0 chr2 89287926 89287954 -163968629 + (CATCC)n Simple_repeat Simple_repeat 3 30 0 283 274 14 21 chr2 89288199 89288309 -163968274 - MIR SINE MIR -60 148 81 1458 78 167 71 chr2 89288325 89288469 -163968114 - AluSg1 SINE Alu 0 309 180 2380 30 10 13 chr2 89288469 89288805 -163967778 - AluY SINE Alu 0 311 1 1458 78 167 71 chr2 89288805 89288942 -163967641 - AluSg1 SINE Alu -129 180 1 316 326 56 0 chr2 89288946 89289090 -163967493 - MARNA DNA Mariner -252 334 183 906 63 0 0 chr2 89290612 89290723 -163965860 + HY1 scRNA scRNA 1 111 -1 225 0 0 0 chr2 89291122 89291147 -163965436 + (CACCC)n Simple_repeat Simple_repeat 3 27 0 201 182 23 0 chr2 89293092 89293136 -163963447 + L2 LINE L2 3265 3309 -4 218 288 0 90 chr2 89294171 89294282 -163962301 + MIR SINE MIR 125 225 -37 184 273 39 0 chr2 89294975 89295052 -163961531 + L2 LINE L2 2985 3064 -208 931 176 57 6 chr2 89295259 89295435 -163961148 + MER3 DNA MER1_type 1 185 -24 1826 122 31 3 chr2 89295842 89296128 -163960455 + AluSx SINE Alu 1 294 -18 369 240 85 94 chr2 89296368 89296438 -163960145 + MIR SINE MIR 41 110 -152 2163 91 3 10 chr2 89296438 89296734 -163959849 - AluSx SINE Alu -18 294 1 369 240 85 94 chr2 89296734 89296811 -163959772 + MIR SINE MIR 110 186 -76 1332 192 105 4 chr2 89296820 89297086 -163959497 + AluJb SINE Alu 1 293 -19 2606 94 0 37 chr2 89297086 89297458 -163959125 + L1PA13 LINE L1 5791 6150 -13 369 240 85 94 chr2 89297458 89297469 -163959114 + MIR SINE MIR 186 196 -66 2098 92 0 61 chr2 89297469 89297796 -163958787 + AluSc SINE Alu 1 307 -2 369 240 85 94 chr2 89297796 89297840 -163958743 + MIR SINE MIR 196 240 -22 21 0 0 0 chr2 89297999 89298020 -163958563 + AT_rich Low_complexity Low_complexity 1 21 0 386 133 17 0 chr2 89298023 89298083 -163958500 - U7 snRNA snRNA -1 62 2 272 277 36 0 chr2 89298373 89298456 -163958127 + MLT1K LTR MaLR 492 577 -11 923 129 0 7 chr2 89298457 89298596 -163957987 + FLAM_C SINE Alu 1 138 -5 1817 175 7 3 chr2 89298610 89298918 -163957665 + 7SLRNA srpRNA srpRNA 11 319 -1 212 315 27 0 chr2 89298948 89299021 -163957562 - MIR SINE MIR -85 123 49 264 149 21 0 chr2 89299070 89299117 -163957466 - L2 LINE L2 -2 3311 3264 194 128 26 0 chr2 89299332 89299371 -163957212 + (CCTA)n Simple_repeat Simple_repeat 4 43 0 840 183 0 0 chr2 89299532 89299663 -163956920 + FLAM_C SINE Alu 1 131 -2 635 112 0 0 chr2 89299879 89299968 -163956615 - AluSg/x SINE Alu -6 304 216 2038 118 0 3 chr2 89300068 89300357 -163956226 + AluSq SINE Alu 1 288 -25 235 235 0 0 chr2 89300358 89300426 -163956157 - L1MC4 LINE L1 -1339 6703 6636 400 173 0 127 chr2 89300433 89300543 -163956040 + MIR3 SINE MIR 97 192 -16 346 292 31 0 chr2 89300915 89301011 -163955572 - MIR3 SINE MIR -4 204 106 1551 195 20 3 chr2 89301551 89301848 -163954735 - AluJo SINE Alu -10 302 1 194 208 0 19 chr2 89302999 89303052 -163953531 - MIR SINE MIR -73 135 84 2220 96 3 0 chr2 89303901 89304204 -163952379 + AluSp SINE Alu 1 304 -9 2180 112 7 0 chr2 89304268 89304573 -163952010 - AluSq SINE Alu -6 307 1 2085 114 0 43 chr2 89305790 89306115 -163950468 + AluSx SINE Alu 1 311 -1 847 137 16 0 chr2 89306890 89307014 -163949569 + FLAM_C SINE Alu 2 127 -6 1493 179 0 71 chr2 89307029 89307353 -163949230 + AluJb SINE Alu 1 301 -11 762 195 0 0 chr2 89307491 89307619 -163948964 - FLAM_A SINE Alu -5 128 1 1790 274 54 35 chr2 89307629 89308135 -163948448 + L2 LINE L2 1993 2488 -825 1998 139 0 3 chr2 89308135 89308437 -163948146 + AluJb SINE Alu 1 301 -11 1790 274 54 35 chr2 89308437 89308836 -163947747 + L2 LINE L2 2488 3135 -178 195 42 0 0 chr2 89308836 89308860 -163947723 + (TG)n Simple_repeat Simple_repeat 1 24 0 312 133 0 0 chr2 89308915 89308960 -163947623 - HERV9 LTR ERV1 -41 8358 8314 1851 148 0 0 chr2 89308960 89309237 -163947346 - AluSx SINE Alu -35 277 1 1735 164 0 23 chr2 89309237 89309541 -163947042 - AluJb SINE Alu -4 308 12 326 273 19 84 chr2 89309552 89309673 -163946910 + L2 LINE L2 3168 3278 -35 2447 146 22 22 chr2 89309673 89310038 -163946545 - MER57A LTR ERV1 0 403 36 2152 110 0 0 chr2 89310038 89310373 -163946210 + AluSx SINE Alu 1 312 0 2447 146 22 22 chr2 89310373 89310410 -163946173 - MER57A LTR ERV1 -366 37 1 326 273 19 84 chr2 89310410 89310442 -163946141 + L2 LINE L2 3278 3311 -2 239 285 73 46 chr2 89310412 89310571 -163946012 - MIR SINE MIR -11 197 45 * 2231 103 0 0 chr2 89310817 89311118 -163945465 + AluSg SINE Alu 1 301 -9 1021 170 0 0 chr2 89311118 89311283 -163945300 + AluJb SINE Alu 134 298 -14 671 129 0 0 chr2 89311421 89311522 -163945061 - LTR12 LTR ERV1 -133 581 481 363 245 23 0 chr2 89311523 89311641 -163944942 - LTR30 LTR ERV1 -79 677 552 830 148 123 38 chr2 89311641 89311877 -163944706 - LTR12 LTR ERV1 -458 256 1 4754 76 23 18 chr2 89312067 89312963 -163943620 + SVA Other Other 140 866 -520 6380 70 19 39 chr2 89312980 89313954 -163942629 + SVA Other Other 433 1386 0 514 167 14 94 chr2 89313987 89314047 -163942536 + LTR49-int LTR ERV1 3146 3190 -3141 2058 135 3 19 chr2 89314047 89314365 -163942218 - AluSq SINE Alu 0 313 1 514 167 14 94 chr2 89314365 89314442 -163942141 + LTR49-int LTR ERV1 3190 3272 -3059 341 219 0 0 chr2 89314502 89314566 -163942017 + LTR49-int LTR ERV1 3275 3338 -2993 489 194 20 0 chr2 89314625 89314723 -163941860 + LTR49-int LTR ERV1 3348 3447 -2884 2164 116 7 0 chr2 89316139 89316449 -163940134 + AluSx SINE Alu 1 312 0 2168 116 3 0 chr2 89316829 89317139 -163939444 - AluSx SINE Alu -1 311 1 1838 166 13 0 chr2 89317441 89317743 -163938840 - AluSx SINE Alu -6 306 1 1639 157 33 20 chr2 89318189 89318488 -163938095 - AluSx SINE Alu -9 303 1 475 242 134 84 chr2 89318955 89319060 -163937523 + L1ME3A LINE L1 5596 5694 -476 2284 94 3 0 chr2 89319060 89319368 -163937215 + AluSg SINE Alu 1 309 -1 475 242 134 84 chr2 89319368 89319405 -163937178 + L1ME3A LINE L1 5694 5728 -442 2007 126 3 7 chr2 89319405 89319707 -163936876 + AluJb SINE Alu 1 301 -11 475 242 134 84 chr2 89319707 89319898 -163936685 + L1ME3A LINE L1 5728 5947 -223 22 0 0 0 chr2 89320109 89320131 -163936452 + AT_rich Low_complexity Low_complexity 1 22 0 2069 133 7 0 chr2 89320351 89320653 -163935930 - AluSx SINE Alu -8 304 1 1848 107 71 4 chr2 89320680 89320961 -163935622 + AluSq SINE Alu 1 300 -13 882 94 23 8 chr2 89321115 89321243 -163935340 - AluJo SINE Alu -178 134 5 3212 149 15 37 chr2 89321268 89321388 -163935195 - MER1A DNA MER1_type -2173 527 406 2084 105 3 22 chr2 89321388 89321702 -163934881 - AluSc SINE Alu -1 308 1 3212 149 15 37 chr2 89321702 89322118 -163934465 - MER1A DNA MER1_type -2294 406 3 218 219 31 156 chr2 89322145 89322273 -163934310 - MIR SINE MIR -24 238 127 336 234 27 9 chr2 89322373 89322484 -163934099 - L1ME LINE L1 -349 5815 5703 2148 134 7 0 chr2 89322490 89322795 -163933788 - AluSx SINE Alu -5 307 1 322 320 83 44 chr2 89322795 89322976 -163933607 - HAL1 LINE L1 -1950 557 370 620 238 41 78 chr2 89323750 89323916 -163932667 + L1ME3A LINE L1 5679 5850 -320 186 43 0 0 chr2 89323916 89323939 -163932644 + (TG)n Simple_repeat Simple_repeat 1 23 0 1802 126 65 4 chr2 89323946 89324208 -163932375 - AluSx SINE Alu -34 278 1 620 238 41 78 chr2 89324208 89324302 -163932281 + L1ME3A LINE L1 5856 5937 -233 825 178 0 0 chr2 89324476 89324605 -163931978 - FLAM_A SINE Alu -4 129 1 2177 126 0 0 chr2 89324823 89325117 -163931466 - AluSx SINE Alu -17 295 2 2246 123 0 3 chr2 89325118 89325427 -163931156 - AluSq SINE Alu -5 308 1 1734 173 3 20 chr2 89326066 89326366 -163930217 - AluJo SINE Alu -17 295 1 2076 101 57 17 chr2 89326653 89326951 -163929632 - AluSq SINE Alu -3 310 1 264 184 20 0 chr2 89327222 89327271 -163929312 - MIR SINE MIR -65 197 148 435 301 35 26 chr2 89327325 89327438 -163929145 + L2 LINE L2 3155 3268 -4 268 211 26 66 chr2 89327442 89327518 -163929065 - MIR SINE MIR -114 148 76 351 0 0 0 chr2 89328849 89328888 -163927695 + (CA)n Simple_repeat Simple_repeat 2 40 0 486 257 53 56 chr2 89328972 89329256 -163927327 + L1MC4 LINE L1 7617 7899 -143 2201 106 3 13 chr2 89329483 89329785 -163926798 - AluSx SINE Alu -13 299 1 2214 105 0 3 chr2 89330181 89330467 -163926116 + AluSx SINE Alu 11 295 -17 2390 98 0 9 chr2 89331349 89331664 -163924919 + AluSx SINE Alu 1 312 0 35 0 0 0 chr2 89331664 89331699 -163924884 + AT_rich Low_complexity Low_complexity 1 35 0 502 234 16 8 chr2 89331763 89331887 -163924696 - LTR33 LTR ERVL 0 521 397 521 247 77 31 chr2 89332001 89332195 -163924388 - LTR33 LTR ERVL -318 203 1 2120 104 0 11 chr2 89332246 89332525 -163924058 + AluSx SINE Alu 1 276 -36 201 74 0 0 chr2 89332526 89332553 -163924030 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 1899 168 3 0 chr2 89332560 89332857 -163923726 + AluSx SINE Alu 1 298 -14 447 161 31 1 chr2 89332864 89332962 -163923621 + L1MA9 LINE L1 6162 6258 -42 1833 152 10 3 chr2 89332963 89333252 -163923331 + AluJb SINE Alu 7 297 -15 2473 99 0 0 chr2 89333256 89333568 -163923015 + AluSq SINE Alu 1 312 -1 381 178 0 0 chr2 89333593 89333666 -163922917 + L1MA9 LINE L1 6240 6312 0 931 29 0 0 chr2 89334751 89334855 -163921728 + AluSc SINE Alu 1 104 -205 1950 95 24 0 chr2 89334858 89335173 -163921410 + AluSx SINE Alu 23 343 0 2255 84 3 3 chr2 89335173 89335518 -163921065 + AluY SINE Alu 1 311 0 782 233 25 65 chr2 89335544 89335789 -163920794 + L2 LINE L2 2918 3152 -161 544 169 84 30 chr2 89335799 89335812 -163920771 - AluSc SINE Alu -6 303 292 1930 127 0 98 chr2 89335812 89336107 -163920476 - L1MB3 LINE L1 -1 6182 5936 2306 86 31 0 chr2 89336107 89336399 -163920184 - AluSx SINE Alu -11 301 1 1930 127 0 98 chr2 89336399 89336512 -163920071 - L1MB3 LINE L1 -247 5936 5814 544 169 84 30 chr2 89336512 89336664 -163919919 - AluSc SINE Alu -17 292 129 2407 96 3 0 chr2 89336936 89337238 -163919345 - AluSq SINE Alu -10 303 1 2022 146 0 0 chr2 89337239 89337534 -163919049 - AluSx SINE Alu -17 295 1 2338 168 7 98 chr2 89337534 89337615 -163918968 - MER57-int LTR ERV1 -6806 731 644 11610 22 0 0 chr2 89337615 89339710 -163916873 - L1PA2 LINE L1 0 6155 4058 2338 168 7 98 chr2 89339710 89340189 -163916394 - MER57-int LTR ERV1 -6893 644 222 2192 109 20 0 chr2 89340190 89340483 -163916100 - AluY SINE Alu -12 299 1 634 194 0 0 chr2 89340506 89340604 -163915979 - AluJ/FLAM SINE Alu -213 99 2 22 56 0 0 chr2 89340624 89340660 -163915923 + AT_rich Low_complexity Low_complexity 1 36 0 1638 115 149 11 chr2 89340856 89341117 -163915466 + AluSg1 SINE Alu 1 297 -12 689 203 0 44 chr2 89341547 89341705 -163914878 + Charlie1 DNA MER1_type 41 191 -2570 2233 117 0 3 chr2 89341705 89342003 -163914580 - AluSx SINE Alu -15 297 1 297 122 68 14 chr2 89342014 89342088 -163914495 + Charlie1 DNA MER1_type 2572 2649 -112 845 171 0 0 chr2 89342098 89342227 -163914356 - FLAM_A SINE Alu -4 129 1 2290 112 0 0 chr2 89342239 89342535 -163914048 - AluSx SINE Alu -16 296 1 979 134 6 25 chr2 89342544 89342701 -163913882 - FRAM SINE Alu -23 153 1 807 249 71 66 chr2 89342762 89342913 -163913670 + L1ME3A LINE L1 5255 5404 -766 1538 189 129 43 chr2 89342913 89343156 -163913427 - MLT1D LTR MaLR 0 505 284 2100 135 0 23 chr2 89343156 89343460 -163913123 - AluSx SINE Alu -15 297 1 1538 189 129 43 chr2 89343460 89343681 -163912902 - MLT1D LTR MaLR -221 284 1 807 249 71 66 chr2 89343681 89343922 -163912661 + L1ME3A LINE L1 5404 5649 -521 1332 73 0 12 chr2 89343930 89344095 -163912488 - AluSq SINE Alu -150 163 1 1667 246 12 8 chr2 89344105 89344504 -163912079 + MLT1G LTR MaLR 190 590 0 733 235 39 15 chr2 89344504 89344708 -163911875 + L1ME3A LINE L1 5646 5854 -316 609 197 175 0 chr2 89344704 89344887 -163911696 - L1ME3A LINE L1 -21 6149 5935 * 2007 140 3 14 chr2 89345066 89345389 -163911194 - AluSx SINE Alu 0 320 1 235 222 14 14 chr2 89345435 89345507 -163911076 - L1ME3A LINE L1 -3 6167 6096 569 207 72 0 chr2 89345878 89345989 -163910594 + FLAM_C SINE Alu 2 120 -23 236 28 56 0 chr2 89345989 89346025 -163910558 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 382 198 40 20 chr2 89346185 89346286 -163910297 + LTR43 LTR ERV1 189 291 -311 271 156 0 0 chr2 89346776 89346821 -163909762 - Alu SINE Alu -13 289 245 1477 171 36 47 chr2 89346821 89347096 -163909487 - AluJo SINE Alu -40 272 1 2419 167 52 6 chr2 89347105 89347589 -163908994 - L1MB3 LINE L1 -40 6143 5638 353 137 0 68 chr2 89347589 89347662 -163908921 + MLT1F1 LTR MaLR 500 567 0 2318 106 3 13 chr2 89347859 89348171 -163908412 + AluSp SINE Alu 1 309 -4 207 0 0 0 chr2 89348189 89348212 -163908371 + (T)n Simple_repeat Simple_repeat 1 23 0 372 254 156 64 chr2 89348791 89348878 -163907705 + L1ME4a LINE L1 5818 5896 -225 2053 151 0 0 chr2 89348878 89349176 -163907407 + AluSx SINE Alu 1 298 -14 372 254 156 64 chr2 89349176 89349261 -163907322 + L1ME4a LINE L1 5896 6006 -115 1851 158 92 48 chr2 89349356 89349735 -163906848 + MSTD LTR MaLR 1 396 0 2778 129 11 25 chr2 89349864 89350298 -163906285 + MSTA LTR MaLR 1 428 0 542 206 0 10 chr2 89350300 89350402 -163906181 + Tigger3(Golem) DNA MER2_type 1 101 -2928 * 623 81 0 0 chr2 89350399 89350486 -163906097 + Tigger3(Golem) DNA MER2_type 2251 2337 -692 734 185 116 23 chr2 89350486 89350659 -163905924 - AluJo SINE Alu -3 309 121 1586 185 53 20 chr2 89350685 89350987 -163905596 + AluJb SINE Alu 1 312 0 1675 177 0 42 chr2 89350992 89351303 -163905280 + AluJo SINE Alu 1 298 -14 2462 82 3 0 chr2 89351303 89351609 -163904974 + AluSg SINE Alu 1 307 -3 676 94 0 8 chr2 89351610 89351727 -163904856 + Tigger3(Golem) DNA MER2_type 2394 2509 -520 2316 89 0 3 chr2 89351727 89352020 -163904563 + AluSg1 SINE Alu 1 292 -17 2257 122 3 0 chr2 89352026 89352330 -163904253 + AluSx SINE Alu 1 305 -7 288 234 58 15 chr2 89352424 89352561 -163904022 + HAL1b LINE L1 1172 1314 -34 2327 100 3 13 chr2 89353145 89353454 -163903129 + AluSx SINE Alu 1 306 -6 443 297 87 35 chr2 89353548 89353834 -163902749 - L1MC/D LINE L1 -459 5662 5483 2386 102 0 0 chr2 89353970 89354264 -163902319 + AluSg SINE Alu 1 294 -16 2242 128 0 0 chr2 89354264 89354562 -163902021 + AluSq SINE Alu 1 298 -15 225 0 0 0 chr2 89354717 89354742 -163901841 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 845 142 0 24 chr2 89354749 89354876 -163901707 - FLAM_C SINE Alu -19 124 1 1843 140 26 19 chr2 89354886 89355103 -163901480 - AluSx SINE Alu 0 356 135 2038 126 6 31 chr2 89355103 89355420 -163901163 - AluSx SINE Alu -1 311 3 1843 140 26 19 chr2 89355420 89355553 -163901030 - AluSx SINE Alu -221 135 4 2166 120 0 0 chr2 89355715 89356040 -163900543 - AluSx SINE Alu 0 325 1 830 65 37 0 chr2 89356133 89356241 -163900342 + HY1 scRNA scRNA 1 112 0 1818 254 73 62 chr2 89356268 89356749 -163899834 - HAL1 LINE L1 -1682 825 330 2381 100 7 0 chr2 89356749 89357058 -163899525 - AluSx SINE Alu -1 311 1 1818 254 73 62 chr2 89357058 89357353 -163899230 - HAL1 LINE L1 -2177 330 40 1250 136 56 174 chr2 89358459 89358599 -163897984 + AluJb SINE Alu 1 79 -223 1508 110 9 22 chr2 89358599 89358826 -163897757 - AluSg/x SINE Alu -15 297 74 1250 136 56 174 chr2 89358826 89359024 -163897559 + AluJb SINE Alu 79 299 -3 180 313 119 0 chr2 89359333 89359400 -163897183 - MIR SINE MIR -67 195 121 327 228 167 53 chr2 89359428 89359542 -163897041 + MER5A DNA MER1_type 9 135 -54 258 211 0 0 chr2 89360584 89360636 -163895947 + LTR30 LTR ERV1 1 52 -670 1157 150 39 56 chr2 89360637 89360870 -163895713 + LTR12 LTR ERV1 54 282 -432 366 209 11 0 chr2 89360877 89360968 -163895615 + LTR30 LTR ERV1 552 643 -79 659 129 0 0 chr2 89360969 89361070 -163895513 + LTR12 LTR ERV1 481 581 -133 1865 76 4 8 chr2 89361316 89361553 -163895030 - AluY SINE Alu -75 236 1 1186 85 0 0 chr2 89362234 89362375 -163894208 + AluSq/x SINE Alu 1 141 -172 2144 127 3 0 chr2 89362375 89362666 -163893917 + AluSg SINE Alu 1 292 -18 337 292 102 53 chr2 89362727 89362893 -163893690 - L2 LINE L2 -214 3058 2901 377 185 0 12 chr2 89362893 89362974 -163893609 - MER116 DNA Mariner 0 80 1 337 292 102 53 chr2 89362974 89363103 -163893480 - L2 LINE L2 -371 2901 2747 1321 215 30 30 chr2 89363103 89363115 -163893468 - AluJo SINE Alu -10 302 291 213 39 0 0 chr2 89363115 89363141 -163893442 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 1321 215 30 30 chr2 89363141 89363430 -163893153 - AluJo SINE Alu -20 292 1 337 292 102 53 chr2 89363430 89363452 -163893131 - L2 LINE L2 -525 2747 2728 277 286 67 0 chr2 89364067 89364172 -163892411 - MIR3 SINE MIR -36 172 61 23 33 0 0 chr2 89367913 89367943 -163888640 + AT_rich Low_complexity Low_complexity 1 30 0 1899 157 0 47 chr2 89369561 89369880 -163886703 + AluJb SINE Alu 1 304 -8 829 186 0 0 chr2 89369950 89370079 -163886504 + FRAM SINE Alu 12 140 -36 207 0 0 0 chr2 89370088 89370111 -163886472 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 2314 75 37 0 chr2 89370633 89370928 -163885655 + AluSp SINE Alu 3 308 -5 786 119 9 0 chr2 89371457 89371566 -163885017 + AluSq/x SINE Alu 4 113 -199 823 148 0 16 chr2 89371571 89371693 -163884890 - FLAM_C SINE Alu -23 120 1 1581 221 45 23 chr2 89371954 89372439 -163884144 - L1M4 LINE L1 -1347 4799 4304 2287 113 0 0 chr2 89372552 89372853 -163883730 - AluSg SINE Alu -9 301 1 2288 99 3 0 chr2 89372855 89373149 -163883434 - AluSx SINE Alu -17 295 1 1604 128 135 59 chr2 89373268 89373557 -163883026 + AluJo SINE Alu 1 311 -1 2010 147 0 0 chr2 89373726 89374033 -163882550 + AluSx SINE Alu 1 307 -5 810 209 251 17 chr2 89374184 89374423 -163882160 - AluSg1 SINE Alu -3 306 12 386 282 99 30 chr2 89374501 89374632 -163881951 + L1ME4a LINE L1 5717 5856 -265 1516 180 3 43 chr2 89375080 89375233 -163881350 - AluJb SINE Alu -24 288 151 1974 119 19 16 chr2 89375233 89375544 -163881039 - AluSp SINE Alu -1 312 1 1516 180 3 43 chr2 89375544 89375690 -163880893 - AluJb SINE Alu -161 151 1 358 191 45 22 chr2 89375773 89375862 -163880721 + MER57A-int LTR ERV1 3612 3702 -2244 736 197 0 29 chr2 89376845 89376982 -163879601 + FLAM_C SINE Alu 1 133 0 2407 68 0 0 chr2 89376987 89377282 -163879301 + AluSp SINE Alu 1 295 -18 3172 151 51 100 chr2 89377342 89377432 -163879151 + MER57A-int LTR ERV1 3791 3884 -2447 1982 118 38 0 chr2 89377432 89377721 -163878862 - AluSx SINE Alu -12 300 1 3172 151 51 100 chr2 89377721 89377958 -163878625 + MER57A-int LTR ERV1 3884 4131 -2200 1674 137 74 0 chr2 89377958 89378243 -163878340 - AluSg SINE Alu -4 306 1 3172 151 51 100 chr2 89378243 89378447 -163878136 + MER57A-int LTR ERV1 4131 4343 -1988 2193 112 3 0 chr2 89378447 89378759 -163877824 - AluSp SINE Alu 0 313 1 3172 151 51 100 chr2 89378759 89378816 -163877767 + MER57A-int LTR ERV1 4343 4401 -1930 1680 153 36 0 chr2 89378816 89379117 -163877466 + AluJb SINE Alu 1 312 0 1978 113 0 10 chr2 89379122 89379435 -163877148 + AluSq SINE Alu 6 313 0 3172 151 51 100 chr2 89379435 89379700 -163876883 + MER57A-int LTR ERV1 4405 4611 -1720 1404 156 122 11 chr2 89379703 89379966 -163876617 - AluSg SINE Alu -18 292 1 2877 148 29 53 chr2 89379967 89380077 -163876506 + MER57A-int LTR ERV1 5304 5415 -2122 1441 172 28 14 chr2 89380077 89380367 -163876216 - AluJb SINE Alu -18 294 1 2877 148 29 53 chr2 89380367 89380570 -163876013 + MER57A-int LTR ERV1 5415 5622 -1915 257 0 30 0 chr2 89380570 89380603 -163875980 + (TG)n Simple_repeat Simple_repeat 1 34 0 2877 148 29 53 chr2 89380603 89380850 -163875733 + MER57A-int LTR ERV1 5622 5851 -1686 1998 98 4 0 chr2 89381096 89381370 -163875213 + AluSx SINE Alu 6 280 -32 207 0 0 0 chr2 89381399 89381422 -163875161 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 4739 173 33 9 chr2 89381476 89382326 -163874257 + MER57A-int LTR ERV1 5825 6197 -479 213 39 0 0 chr2 89382336 89382362 -163874221 + (CA)n Simple_repeat Simple_repeat 2 27 0 518 0 16 0 chr2 89382362 89382424 -163874159 + (GA)n Simple_repeat Simple_repeat 2 64 0 722 164 9 0 chr2 89382424 89382534 -163874049 - FLAM_C SINE Alu -31 112 2 2541 186 19 8 chr2 89382534 89383002 -163873581 + MER57A-int LTR ERV1 6672 7144 -393 684 141 74 61 chr2 89383002 89383227 -163873356 + LTR54B LTR ERV1 1 239 -271 674 247 24 12 chr2 89383227 89383397 -163873186 + MER57A-int LTR ERV1 7366 7537 0 1951 149 88 40 chr2 89383397 89383607 -163872976 + MER57A LTR ERV1 1 199 -203 1993 121 3 17 chr2 89383607 89383930 -163872653 - AluSx SINE Alu 0 312 1 1951 149 88 40 chr2 89383930 89383953 -163872630 + MER57A LTR ERV1 199 219 -183 1564 182 0 14 chr2 89383953 89384277 -163872306 - AluJb SINE Alu 0 312 1 1951 149 88 40 chr2 89384277 89384418 -163872165 + MER57A LTR ERV1 219 391 -11 1963 96 64 0 chr2 89384418 89384698 -163871885 + AluSx SINE Alu 1 298 -14 1951 149 88 40 chr2 89384698 89384711 -163871872 + MER57A LTR ERV1 391 402 0 2221 99 3 0 chr2 89384720 89385024 -163871559 + AluSp SINE Alu 1 305 -8 242 309 21 0 chr2 89385817 89385914 -163870669 - L1 LINE L1 -1315 4831 4733 206 229 115 0 chr2 89385973 89386034 -163870549 + MIR SINE MIR 72 139 -123 738 263 86 22 chr2 89386034 89386070 -163870513 + MIR SINE MIR 16 48 -214 1141 209 155 75 chr2 89386070 89386553 -163870030 - LTR33A LTR ERVL -1 522 1 738 263 86 22 chr2 89386553 89386748 -163869835 + MIR SINE MIR 48 262 0 806 160 8 8 chr2 89386803 89386934 -163869649 + AluJo SINE Alu 2 132 -180 23 0 0 0 chr2 89386956 89386979 -163869604 + AT_rich Low_complexity Low_complexity 1 23 0 2050 107 21 0 chr2 89386984 89387274 -163869309 + AluSp SINE Alu 1 296 -17 789 183 0 0 chr2 89387274 89387400 -163869183 + AluJo SINE Alu 134 259 -53 305 311 55 55 chr2 89387812 89388047 -163868536 - MIR SINE MIR -8 254 20 244 204 0 0 chr2 89388092 89388146 -163868437 + (CA)n Simple_repeat Simple_repeat 1 54 0 390 272 130 15 chr2 89389267 89389462 -163867121 + L2 LINE L2 2766 2980 -292 811 223 6 0 chr2 89389488 89389663 -163866920 - FRAM SINE Alu 0 40 1 431 258 217 8 chr2 89389666 89389906 -163866677 + L2 LINE L2 3024 3313 0 200 336 27 18 chr2 89389970 89390080 -163866503 + MIR3 SINE MIR 92 202 -6 1004 191 21 0 chr2 89390285 89390473 -163866110 + AluJb SINE Alu 121 312 0 237 242 121 0 chr2 89390580 89390646 -163865937 - L2 LINE L2 -6 3307 3234 186 294 101 18 chr2 89390950 89391059 -163865524 + MIR SINE MIR 32 149 -59 217 362 67 38 chr2 89391309 89391414 -163865169 + L2 LINE L2 3121 3228 -44 408 279 174 21 chr2 89391464 89391654 -163864929 + L1ME4a LINE L1 5820 6038 -83 302 269 65 0 chr2 89392320 89392428 -163864155 - MIR3 SINE MIR -18 190 76 325 211 224 79 chr2 89392812 89392964 -163863619 - L2 LINE L2 -1 3312 3139 1927 114 0 11 chr2 89392964 89393088 -163863495 + L1M3 LINE L1 5537 5661 -522 2181 99 0 0 chr2 89393088 89393381 -163863202 + AluSg SINE Alu 1 293 -17 1927 114 0 11 chr2 89393381 89393536 -163863047 + L1M3 LINE L1 5661 5813 -370 243 243 176 0 chr2 89393639 89393713 -163862870 - MIR SINE MIR -174 88 2 228 254 53 53 chr2 89393721 89393835 -163862748 - L2 LINE L2 -228 3044 2931 1023 147 6 12 chr2 89395519 89395689 -163860894 + AluJo SINE Alu 1 169 -143 2256 94 7 0 chr2 89396040 89396349 -163860234 - AluSp SINE Alu 0 313 3 2109 104 3 7 chr2 89396363 89396670 -163859913 - AluSx SINE Alu -6 306 1 24 38 0 38 chr2 89397177 89397196 -163859387 + AT_rich Low_complexity Low_complexity 1 19 -32 2311 75 0 0 chr2 89397196 89397488 -163859095 + AluSp SINE Alu 2 293 -20 24 38 0 38 chr2 89397488 89397521 -163859062 + AT_rich Low_complexity Low_complexity 19 51 0 1516 261 101 25 chr2 89397538 89398251 -163858332 - L1MC4a LINE L1 -35 6086 5322 316 327 59 33 chr2 89398582 89398885 -163857698 + L1ME4a LINE L1 5561 5871 -250 25 31 0 0 chr2 89398926 89398958 -163857625 + AT_rich Low_complexity Low_complexity 1 32 0 3971 135 16 41 chr2 89399032 89399285 -163857298 - L1MB7 LINE L1 -4 6180 5922 1855 144 3 3 chr2 89399285 89399576 -163857007 - AluJb SINE Alu -21 291 1 3971 135 16 41 chr2 89399576 89399668 -163856915 - L1MB7 LINE L1 -262 5922 5829 2043 98 3 7 chr2 89399668 89399963 -163856620 + AluSx SINE Alu 1 294 -18 3971 135 16 41 chr2 89399963 89400325 -163856258 - L1MB7 LINE L1 -355 5829 5490 681 158 48 14 chr2 89400332 89400478 -163856105 - L1MB7 LINE L1 -910 5236 5086 1889 134 10 10 chr2 89400487 89400779 -163855804 + AluSx SINE Alu 1 292 -20 2432 54 0 0 chr2 89400784 89401078 -163855505 + AluY SINE Alu 1 294 -17 1478 180 74 0 chr2 89401617 89401900 -163854683 + AluJb SINE Alu 1 304 -8 1955 132 0 3 chr2 89402182 89402470 -163854113 + AluSx SINE Alu 1 287 -25 2185 103 7 3 chr2 89402482 89402792 -163853791 - AluSq SINE Alu -2 311 1 186 43 0 0 chr2 89402822 89402845 -163853738 + (TCCC)n Simple_repeat Simple_repeat 4 26 0 1988 104 4 4 chr2 89402854 89403133 -163853450 - AluSq SINE Alu -32 281 3 2080 86 17 17 chr2 89403221 89403512 -163853071 - AluSx SINE Alu -21 291 1 887 145 23 203 chr2 89403857 89403896 -163852687 - MER21A LTR ERV1 -292 639 595 2020 107 10 0 chr2 89403896 89404187 -163852396 + AluSq SINE Alu 2 295 -18 887 145 23 203 chr2 89404187 89404457 -163852126 - MER21A LTR ERV1 -336 595 386 * 1628 123 11 58 chr2 89404445 89404722 -163851861 - MER21A LTR ERV1 -667 264 1 263 221 15 15 chr2 89404728 89404796 -163851787 - L1M LINE L1 -765 5405 5338 317 263 325 6 chr2 89405029 89405189 -163851394 + MIR SINE MIR 20 230 -32 2303 65 0 3 chr2 89406089 89406380 -163850203 - AluY SINE Alu -21 290 1 282 303 97 34 chr2 89406448 89406623 -163849960 - L2 LINE L2 -16 3297 3112 290 336 69 9 chr2 89406929 89407045 -163849538 - L2 LINE L2 -453 2861 2739 505 211 86 16 chr2 89407093 89407221 -163849362 - MIR SINE MIR -28 234 98 34 42 0 0 chr2 89409113 89409161 -163847422 + GC_rich Low_complexity Low_complexity 1 48 0 228 163 0 41 chr2 89409584 89409633 -163846950 + C-rich Low_complexity Low_complexity 1 47 0 625 230 29 22 chr2 89415352 89415491 -163841092 + FRAM SINE Alu 13 152 -24 1446 105 139 4 chr2 89416219 89416457 -163840126 + AluY SINE Alu 21 290 -21 1722 118 55 0 chr2 89416468 89416739 -163839844 + AluSx SINE Alu 3 288 -24 267 336 141 54 chr2 89417927 89417948 -163838635 - L2 LINE L2 -747 2567 2549 1798 159 7 0 chr2 89417948 89418238 -163838345 + AluSx SINE Alu 1 292 -20 267 336 141 54 chr2 89418238 89418514 -163838069 - L2 LINE L2 -765 2549 2244 252 317 30 30 chr2 89419182 89419283 -163837300 + MIR SINE MIR 13 113 -149 1956 113 20 0 chr2 89419399 89419691 -163836892 - AluSx SINE Alu -14 298 1 500 223 91 25 chr2 89421356 89421477 -163835106 - FLAM_C SINE Alu -2 131 3 2239 88 7 3 chr2 89423634 89423931 -163832652 - AluSx SINE Alu -14 298 1 1687 156 14 21 chr2 89424485 89424798 -163831785 - AluJo SINE Alu 0 311 1 341 139 40 148 chr2 89425691 89425792 -163830791 + LTR23 LTR ERV1 320 409 -28 189 291 63 47 chr2 89425880 89426007 -163830576 - L2 LINE L2 -6 3307 3179 470 271 88 50 chr2 89426883 89427015 -163829568 + MIR SINE MIR 14 160 -102 805 256 0 0 chr2 89427015 89427175 -163829408 + FRAM SINE Alu 1 160 -6 470 271 88 50 chr2 89427175 89427282 -163829301 + MIR SINE MIR 160 262 0 1202 178 0 10 chr2 89427316 89427524 -163829059 + AluJo SINE Alu 83 288 -24 899 93 0 0 chr2 89427655 89427773 -163828810 + FLAM_C SINE Alu 1 118 -25 192 97 0 0 chr2 89427778 89427809 -163828774 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 565 320 136 10 chr2 89427890 89428199 -163828384 - L3 LINE CR1 -16 1561 1214 24 32 0 0 chr2 89428757 89428788 -163827795 + AT_rich Low_complexity Low_complexity 1 31 0 215 288 82 14 chr2 89429162 89429235 -163827348 + MIR SINE MIR 1 78 -184 2236 77 0 7 chr2 89429461 89429774 -163826809 + AluSp SINE Alu 1 311 0 1130 184 18 36 chr2 89429899 89430122 -163826461 - MER20 DNA MER1_type 0 219 1 2234 67 0 51 chr2 89430335 89430649 -163825934 + AluSq SINE Alu 1 298 -15 1279 167 83 21 chr2 89432000 89432287 -163824296 + AluJo SINE Alu 1 305 -7 2316 84 7 0 chr2 89432287 89432597 -163823986 + AluSx SINE Alu 1 312 0 583 139 26 0 chr2 89432810 89432925 -163823658 - Charlie1 DNA MER1_type -1 2760 2643 2362 58 0 0 chr2 89432930 89433222 -163823361 + AluY SINE Alu 1 292 -19 2189 108 0 10 chr2 89433235 89433542 -163823041 + AluSx SINE Alu 1 304 -8 2236 92 0 0 chr2 89433542 89433836 -163822747 + AluSg SINE Alu 1 294 -16 501 243 10 0 chr2 89433891 89433994 -163822589 + FLAM_A SINE Alu 25 128 -14 568 152 19 0 chr2 89433997 89434102 -163822481 + L1MC2 LINE L1 5825 5931 -413 735 176 24 0 chr2 89434109 89434234 -163822349 - FLAM_C SINE Alu -14 129 2 1458 124 74 150 chr2 89434235 89434483 -163822100 + L1MC2 LINE L1 5917 6182 -162 2320 82 0 3 chr2 89434483 89434789 -163821794 - AluSq SINE Alu -8 305 1 1458 124 74 150 chr2 89434789 89434921 -163821662 + L1MC2 LINE L1 6182 6259 -85 1899 141 3 6 chr2 89434921 89435234 -163821349 - AluJb SINE Alu 0 312 1 1458 124 74 150 chr2 89435234 89435312 -163821271 + L1MC2 LINE L1 6259 6341 -3 1876 134 20 0 chr2 89435316 89435608 -163820975 - AluSx SINE Alu -14 298 1 1650 188 34 46 chr2 89435620 89435785 -163820798 - Charlie1a DNA MER1_type -2324 437 271 2106 97 10 3 chr2 89435785 89436083 -163820500 - AluSx SINE Alu -12 300 1 1650 188 34 46 chr2 89436083 89436327 -163820256 - Charlie1a DNA MER1_type -2490 271 33 2235 99 0 0 chr2 89436497 89436791 -163819792 - AluSx SINE Alu -16 296 3 2221 127 0 0 chr2 89436796 89437110 -163819473 - 7SLRNA srpRNA srpRNA -6 314 1 1803 156 30 0 chr2 89437110 89437405 -163819178 - AluJb SINE Alu -8 304 1 21 36 0 0 chr2 89437626 89437654 -163818929 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr2 89437852 89437877 -163818706 + AT_rich Low_complexity Low_complexity 1 25 0 1961 138 0 0 chr2 89437877 89438196 -163818387 + AluSx SINE Alu 1 319 0 2087 99 0 7 chr2 89438197 89438501 -163818082 + AluSc SINE Alu 1 302 0 727 183 0 0 chr2 89438504 89438630 -163817953 - AluJo/FLAM SINE Alu -186 126 1 2369 84 0 0 chr2 89438697 89439005 -163817578 + AluSg1 SINE Alu 1 308 -1 188 299 136 86 chr2 89439718 89440173 -163816410 - L2 LINE L2 -642 2672 2195 1145 177 28 9 chr2 89440196 89440411 -163816172 - MER20 DNA MER1_type 0 219 1 2240 113 0 0 chr2 89440461 89440772 -163815811 + AluY SINE Alu 1 311 0 2099 123 10 0 chr2 89441162 89441472 -163815111 - AluSq SINE Alu 0 313 1 1761 157 3 29 chr2 89441472 89441784 -163814799 - AluSx SINE Alu -8 304 1 2278 102 0 6 chr2 89442256 89442570 -163814013 + AluSq SINE Alu 1 312 -1 807 136 0 0 chr2 89442570 89442680 -163813903 - AluJo/FLAM SINE Alu -200 112 3 209 258 0 16 chr2 89442712 89442774 -163813809 - MIR SINE MIR -129 133 73 885 226 12 0 chr2 89442894 89443058 -163813525 + FRAM SINE Alu 1 166 0 273 97 53 114 chr2 89443072 89443095 -163813488 - Charlie5 DNA MER1_type -69 2516 2493 2144 111 7 0 chr2 89443095 89443401 -163813182 - AluSg SINE Alu -2 308 1 273 97 53 114 chr2 89443401 89443491 -163813092 - Charlie5 DNA MER1_type -92 2493 2410 884 178 0 93 chr2 89443508 89443665 -163812918 - AluJo SINE Alu -32 280 110 2208 105 3 6 chr2 89443665 89443978 -163812605 - AluSp SINE Alu -1 312 1 1964 142 3 0 chr2 89443980 89444319 -163812264 - AluSx SINE Alu 0 312 5 884 178 0 93 chr2 89444319 89444372 -163812211 - AluJo SINE Alu -203 109 87 1651 177 7 10 chr2 89444386 89444686 -163811897 + AluJo SINE Alu 2 300 -12 2139 81 10 13 chr2 89444733 89445031 -163811552 + AluSq SINE Alu 1 297 -16 1686 173 6 16 chr2 89445041 89445354 -163811229 + AluJo SINE Alu 3 312 0 2204 103 0 6 chr2 89445709 89446020 -163810563 - AluSg SINE Alu -1 309 1 805 95 0 26 chr2 89446344 89446460 -163810123 + FLAM_C SINE Alu 29 141 -2 1837 138 17 3 chr2 89449107 89449398 -163807185 - AluSx SINE Alu -15 297 3 262 301 34 18 chr2 89449495 89449680 -163806903 + MER115 DNA AcHobo 64 335 -358 493 191 0 0 chr2 89449719 89449808 -163806775 + MER115 DNA AcHobo 488 576 -117 2241 75 3 7 chr2 89449808 89450101 -163806482 - AluSq SINE Alu -5 308 17 411 136 0 0 chr2 89450203 89450269 -163806314 + Alu SINE Alu 234 299 -13 2121 93 28 0 chr2 89450269 89450558 -163806025 + AluSx SINE Alu 1 297 -15 1934 153 0 0 chr2 89452021 89452321 -163804262 - AluJo SINE Alu -10 302 3 853 147 0 22 chr2 89452538 89452674 -163803909 + FLAM_C SINE Alu 1 133 0 511 219 42 0 chr2 89452964 89453083 -163803500 - L1MB5 LINE L1 -1 6173 6050 303 327 73 0 chr2 89453110 89453220 -163803363 + L2 LINE L2 3196 3313 0 31 44 0 0 chr2 89453433 89453478 -163803105 + GC_rich Low_complexity Low_complexity 1 45 0 648 209 135 0 chr2 89453822 89453985 -163802598 + MIR SINE MIR 8 192 -70 213 258 15 30 chr2 89454883 89454949 -163801634 + CT-rich Low_complexity Low_complexity 2 66 0 229 337 23 0 chr2 89454955 89455041 -163801542 - L2 LINE L2 0 3313 3226 652 273 34 60 chr2 89455228 89455366 -163801217 + MIR SINE MIR 3 133 -129 2054 101 7 3 chr2 89455366 89455675 -163800908 + AluSg SINE Alu 1 310 0 652 273 34 60 chr2 89455675 89455802 -163800781 + MIR SINE MIR 133 262 0 2190 84 0 16 chr2 89455861 89456171 -163800412 + AluY SINE Alu 1 305 -6 2165 100 14 0 chr2 89456334 89456624 -163799959 - AluSg SINE Alu -16 294 1 619 307 100 0 chr2 89456695 89456926 -163799657 - MIR SINE MIR -1 261 8 1317 151 174 8 chr2 89457050 89457315 -163799268 - AluSg1 SINE Alu 0 309 1 880 131 0 0 chr2 89458074 89458196 -163798387 + FLAM_C SINE Alu 1 122 -21 180 380 109 0 chr2 89458205 89458297 -163798286 - L2 LINE L2 -3 3269 3168 2292 103 0 0 chr2 89458719 89459029 -163797554 - AluSx SINE Alu -2 310 1 252 228 16 94 chr2 89459399 89459526 -163797057 - L2 LINE L2 -18 3254 3138 241 313 36 27 chr2 89459549 89459661 -163796922 + L3 LINE CR1 1463 1575 -2 1838 160 13 0 chr2 89461168 89461468 -163795115 - AluJb SINE Alu -8 304 1 2231 109 0 0 chr2 89461593 89461897 -163794686 + AluSg SINE Alu 1 304 -6 2195 106 3 3 chr2 89462791 89463092 -163793491 - AluSq SINE Alu -12 301 1 617 120 130 0 chr2 89463332 89463432 -163793151 - FLAM_C SINE Alu -29 114 2 422 252 138 0 chr2 89463978 89464101 -163792482 + MER5B DNA MER1_type 1 140 -38 268 222 130 46 chr2 89465282 89465390 -163791193 + MIR SINE MIR 33 149 -113 2201 107 7 0 chr2 89466913 89467213 -163789370 + AluSq SINE Alu 1 302 -11 661 256 110 14 chr2 89469763 89469982 -163786601 + MIR SINE MIR 21 260 -2 24 91 0 0 chr2 89471535 89471601 -163784982 + GC_rich Low_complexity Low_complexity 1 66 0 2549 32 0 7 chr2 89472656 89472965 -163783618 - AluY SINE Alu -4 307 1 2093 106 7 7 chr2 89473291 89473583 -163783000 - AluSq SINE Alu -20 293 2 409 368 15 0 chr2 89473626 89473759 -163782824 + MER91A DNA MER1_type 1 135 -61 258 321 255 5 chr2 89473983 89474167 -163782416 + L3 LINE CR1 1348 1577 0 1825 125 7 15 chr2 89475843 89476115 -163780468 - AluY SINE Alu -1 310 41 275 278 14 14 chr2 89477385 89477457 -163779126 - MER5A DNA MER1_type -7 182 111 254 309 41 21 chr2 89477400 89477497 -163779086 + MER5A DNA MER1_type 35 133 -56 * 258 32 0 0 chr2 89477774 89477805 -163778778 + (A)n Simple_repeat Simple_repeat 1 31 0 2434 82 3 0 chr2 89478761 89479053 -163777530 - AluSx SINE Alu -19 293 1 2300 110 0 0 chr2 89479086 89479385 -163777198 - AluSx SINE Alu -11 301 3 216 274 14 55 chr2 89479422 89479495 -163777088 + L2 LINE L2 3231 3300 -13 756 199 91 43 chr2 89479528 89479714 -163776869 + MIR SINE MIR 34 228 -34 1421 116 134 58 chr2 89479720 89479820 -163776763 + AluJb SINE Alu 12 103 -209 2649 45 3 0 chr2 89479820 89480129 -163776454 - AluY SINE Alu -1 310 1 1421 116 134 58 chr2 89480129 89480303 -163776280 + AluJb SINE Alu 103 307 -5 304 306 41 0 chr2 89482375 89482473 -163774110 + MIR SINE MIR 81 182 -80 2529 80 0 0 chr2 89482634 89482946 -163773637 - AluSx SINE Alu 0 312 1 756 180 8 0 chr2 89483063 89483191 -163773392 + FLAM_C SINE Alu 1 129 -4 1981 86 65 17 chr2 89483212 89483504 -163773079 + AluSg SINE Alu 1 306 -4 741 212 107 97 chr2 89483509 89483757 -163772826 + L1ME1 LINE L1 5768 6012 -154 1703 152 57 20 chr2 89483757 89484053 -163772530 - AluJb SINE Alu -5 307 1 741 212 107 97 chr2 89484053 89484097 -163772486 + L1ME1 LINE L1 6012 6054 -112 3422 126 43 17 chr2 89484097 89484217 -163772366 - MER41C LTR ERV1 0 554 439 2015 137 3 0 chr2 89484217 89484510 -163772073 + AluSx SINE Alu 1 294 -18 3422 126 43 17 chr2 89484510 89484929 -163771654 - MER41C LTR ERV1 -115 439 1 741 212 107 97 chr2 89484929 89484964 -163771619 + L1ME1 LINE L1 6054 6087 -79 504 0 0 0 chr2 89484964 89485020 -163771563 + (GTGTG)n Simple_repeat Simple_repeat 5 60 0 2218 82 4 0 chr2 89485024 89485304 -163771279 - AluSq SINE Alu -32 281 1 741 212 107 97 chr2 89485304 89485360 -163771223 + L1ME1 LINE L1 6089 6162 -4 277 174 0 0 chr2 89485390 89485436 -163771147 - MER69 DNA AcHobo -2479 47 2 2506 45 10 0 chr2 89485622 89485914 -163770669 - AluSp SINE Alu -18 295 1 2377 75 0 40 chr2 89486652 89486974 -163769609 - AluY SINE Alu -2 309 1 904 103 0 29 chr2 89487101 89487237 -163769346 - FLAM_C SINE Alu 0 133 2 754 214 39 6 chr2 89487361 89487539 -163769044 + LTR40b LTR ERVL 6 189 -273 334 238 198 0 chr2 89487539 89487640 -163768943 + FLAM_A SINE Alu 1 121 -12 945 214 90 23 chr2 89487645 89487911 -163768672 + LTR40b LTR ERVL 179 462 0 2258 107 7 7 chr2 89487940 89488240 -163768343 - AluSq SINE Alu -13 300 1 300 286 13 0 chr2 89488713 89488790 -163767793 - L2 LINE L2 -15 3298 3221 658 167 19 0 chr2 89488919 89489027 -163767556 + AluJo/FLAM SINE Alu 1 110 -202 2056 126 10 10 chr2 89489030 89489323 -163767260 - AluSq SINE Alu -19 294 2 289 315 0 0 chr2 89489495 89489587 -163766996 + T-rich Low_complexity Low_complexity 1 92 0 542 148 19 46 chr2 89490032 89490140 -163766443 - AluSq/x SINE Alu -206 106 2 2050 153 7 0 chr2 89490182 89490482 -163766101 + AluJb SINE Alu 1 302 -10 347 178 156 0 chr2 89490491 89490581 -163766002 + MER3 DNA MER1_type 52 155 -54 345 247 25 0 chr2 89490631 89490712 -163765871 - MER2 DNA MER2_type -262 83 1 499 198 28 0 chr2 89490976 89491082 -163765501 - FRAM SINE Alu -9 167 59 1962 88 113 14 chr2 89491819 89492103 -163764480 - AluSq SINE Alu -1 312 1 2165 123 0 7 chr2 89492106 89492406 -163764177 - AluSx SINE Alu -14 298 1 638 240 0 8 chr2 89492409 89492534 -163764049 - AluJo/FLAM SINE Alu -177 125 2 242 191 0 95 chr2 89492535 89492598 -163763985 - AluJo SINE Alu -159 143 87 694 229 8 0 chr2 89492746 89492877 -163763706 + FLAM_C SINE Alu 2 133 0 230 264 0 28 chr2 89493224 89493296 -163763287 + (TATG)n Simple_repeat Simple_repeat 3 72 0 225 153 42 0 chr2 89493302 89493374 -163763209 + (TA)n Simple_repeat Simple_repeat 1 75 0 1244 192 5 9 chr2 89494324 89494548 -163762035 - AluJo SINE Alu -7 305 83 2128 138 3 0 chr2 89494665 89494962 -163761621 + AluSq SINE Alu 1 298 -15 2101 130 14 0 chr2 89495720 89496012 -163760571 + AluSq SINE Alu 1 296 -17 2345 81 3 10 chr2 89496061 89496357 -163760226 + AluSq SINE Alu 1 294 -19 2164 80 0 95 chr2 89496699 89497026 -163759557 - AluSg SINE Alu -10 300 5 2096 123 21 0 chr2 89497094 89497378 -163759205 - AluSg SINE Alu -20 290 1 1342 143 4 39 chr2 89497492 89497722 -163758861 + AluJo SINE Alu 1 222 -90 239 175 0 0 chr2 89497745 89497785 -163758798 - Alu SINE Alu -260 40 1 2355 90 0 0 chr2 89498138 89498428 -163758155 - AluY SINE Alu -21 290 1 2200 114 10 0 chr2 89499042 89499339 -163757244 - AluSq SINE Alu -8 305 6 2535 77 0 0 chr2 89499470 89499780 -163756803 - AluSq SINE Alu -3 310 1 851 123 0 0 chr2 89499839 89499961 -163756622 + AluSg/x SINE Alu 177 298 -14 1559 82 5 5 chr2 89499961 89500169 -163756414 - L1PB1 LINE L1 -7 6144 5937 189 0 0 0 chr2 89500437 89500458 -163756125 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2300 99 0 3 chr2 89501005 89501297 -163755286 - AluSg SINE Alu -19 291 1 989 169 12 6 chr2 89501297 89501463 -163755120 - FRAM SINE Alu -10 166 1 2152 90 29 0 chr2 89501714 89502025 -163754558 - AluSq SINE Alu 0 319 1 199 387 75 0 chr2 89502165 89502258 -163754325 - L2 LINE L2 -47 3225 3126 914 169 7 0 chr2 89502261 89502409 -163754174 + FRAM SINE Alu 4 152 -24 2427 87 3 0 chr2 89502432 89502730 -163753853 - AluSx SINE Alu -13 299 1 2101 130 14 0 chr2 89502779 89503071 -163753512 - AluSq SINE Alu -17 296 1 2128 138 3 0 chr2 89503829 89504126 -163752457 - AluSq SINE Alu -15 298 1 1164 195 9 9 chr2 89504243 89504458 -163752125 + AluJo SINE Alu 83 297 -15 1454 104 0 5 chr2 89504559 89504752 -163751831 - AluY SINE Alu -119 192 1 391 281 116 77 chr2 89504918 89505129 -163751454 - L2 LINE L2 -337 2977 2776 2263 107 0 7 chr2 89505129 89505427 -163751156 - AluSx SINE Alu -16 296 1 391 281 116 77 chr2 89505427 89505492 -163751091 - L2 LINE L2 -538 2776 2685 1648 179 17 10 chr2 89505492 89505789 -163750794 + AluJo SINE Alu 1 299 -13 391 281 116 77 chr2 89505789 89505821 -163750762 - L2 LINE L2 -629 2685 2656 2872 13 0 0 chr2 89505836 89506141 -163750442 - AluYa5 SINE Alu -6 305 1 1863 181 0 0 chr2 89506298 89506590 -163749993 + AluJb SINE Alu 3 294 -18 2414 89 0 0 chr2 89507282 89507574 -163749009 + AluSx SINE Alu 1 292 -20 1260 164 0 0 chr2 89508190 89508379 -163748204 + AluSx SINE Alu 1 189 -123 1740 133 62 8 chr2 89508525 89508781 -163747802 - AluSx SINE Alu -26 286 17 2123 88 27 7 chr2 89509707 89510001 -163746582 - AluSx SINE Alu -12 300 1 2206 126 0 0 chr2 89510032 89510326 -163746257 - AluSq SINE Alu -19 294 1 1392 170 18 131 chr2 89510346 89510545 -163746038 - AluJo SINE Alu -5 297 150 2334 84 7 0 chr2 89510545 89510841 -163745742 - AluSp SINE Alu -15 298 1 1392 170 18 131 chr2 89510841 89510976 -163745607 - AluJo SINE Alu -152 150 1 2181 115 30 3 chr2 89511447 89511751 -163744832 - AluSq SINE Alu -1 312 1 1601 152 39 18 chr2 89511885 89512168 -163744415 - AluJo SINE Alu -15 297 9 2336 105 0 0 chr2 89512296 89512591 -163743992 - AluSx SINE Alu -15 297 3 192 77 0 0 chr2 89512624 89512650 -163743933 + (T)n Simple_repeat Simple_repeat 1 26 0 874 136 0 0 chr2 89512652 89512777 -163743806 - AluJb SINE Alu -187 125 1 189 0 0 0 chr2 89512777 89512798 -163743785 + (T)n Simple_repeat Simple_repeat 1 21 0 1962 145 6 25 chr2 89513624 89513942 -163742641 + AluJb SINE Alu 1 312 0 279 333 94 53 chr2 89513983 89514154 -163742429 + MIR3 SINE MIR 21 198 -10 949 126 0 15 chr2 89514959 89515094 -163741489 + FLAM_C SINE Alu 1 133 0 2295 93 3 10 chr2 89515215 89515516 -163741067 + AluSc SINE Alu 3 301 -8 913 130 65 5 chr2 89515516 89515701 -163740882 - L1MB3 LINE L1 -36 6147 5952 907 207 84 13 chr2 89515686 89515968 -163740615 - L1MB3 LINE L1 -174 6009 5767 * 505 310 35 9 chr2 89516651 89516883 -163739700 - MLT1I LTR MaLR -42 367 130 195 42 0 0 chr2 89517208 89517232 -163739351 + (TCCCC)n Simple_repeat Simple_repeat 4 27 0 2568 71 7 0 chr2 89517233 89517541 -163739042 - AluSx SINE Alu 0 312 3 2135 128 0 0 chr2 89517590 89517871 -163738712 - AluSx SINE Alu -25 287 7 577 268 13 25 chr2 89517878 89518035 -163738548 + L2 LINE L2 3158 3312 -1 771 173 0 0 chr2 89519667 89519681 -163736902 - L1MB3 LINE L1 -629 5662 5649 891 133 0 22 chr2 89519681 89519816 -163736767 - FLAM_C SINE Alu -1 132 1 771 173 0 0 chr2 89519816 89519943 -163736640 - L1MB3 LINE L1 -641 5650 5536 346 224 31 0 chr2 89519910 89520008 -163736575 + L1MA9 LINE L1 6182 6282 -30 * 2070 113 31 0 chr2 89520220 89520493 -163736090 + AluSg SINE Alu 1 285 -25 246 32 0 0 chr2 89520493 89520524 -163736059 + (TTAA)n Simple_repeat Simple_repeat 2 32 0 2070 113 31 0 chr2 89520524 89520543 -163736040 + AluSg SINE Alu 285 302 -8 222 208 0 0 chr2 89520670 89520723 -163735860 + (TCCA)n Simple_repeat Simple_repeat 2 54 0 577 270 18 0 chr2 89520723 89520886 -163735697 + L1MA10 LINE L1 6169 6334 0 755 222 43 22 chr2 89520908 89521124 -163735459 + L1ME3A LINE L1 5726 5949 -213 2312 126 0 0 chr2 89521124 89521433 -163735150 + AluSq SINE Alu 1 309 -4 755 222 43 22 chr2 89521433 89521446 -163735137 + L1ME3A LINE L1 5949 5960 -202 392 247 93 0 chr2 89521526 89521676 -163734907 + L1ME3A LINE L1 5989 6152 -18 447 219 0 0 chr2 89522016 89522349 -163734234 + (TG)n Simple_repeat Simple_repeat 1 333 0 1651 229 47 10 chr2 89522363 89522770 -163733813 + MLT1E2 LTR MaLR 205 626 0 791 189 0 0 chr2 89523079 89523201 -163733382 - FLAM_C SINE Alu -10 123 2 526 146 209 0 chr2 89523308 89523418 -163733165 - FLAM_A SINE Alu 0 133 1 2284 43 58 0 chr2 89523744 89524049 -163732534 + AluY SINE Alu 1 311 0 2186 92 7 30 chr2 89525231 89525536 -163731047 + AluSx SINE Alu 2 299 -13 23 33 0 0 chr2 89525679 89525709 -163730874 + AT_rich Low_complexity Low_complexity 1 30 0 600 352 127 22 chr2 89525806 89526397 -163730186 + L1M4 LINE L1 4747 5399 -747 552 100 12 0 chr2 89526518 89526598 -163729985 - AluS SINE Alu -230 82 2 1602 152 39 18 chr2 89526733 89527016 -163729567 - AluJo SINE Alu -15 297 9 2347 105 0 0 chr2 89527144 89527439 -163729144 - AluSx SINE Alu -15 297 3 192 77 0 0 chr2 89527472 89527498 -163729085 + (T)n Simple_repeat Simple_repeat 1 26 0 880 136 0 0 chr2 89527500 89527625 -163728958 - AluJb SINE Alu -187 125 1 189 0 0 0 chr2 89527625 89527646 -163728937 + (T)n Simple_repeat Simple_repeat 1 21 0 1892 151 6 25 chr2 89528472 89528790 -163727793 + AluJb SINE Alu 1 312 0 238 335 91 51 chr2 89528831 89529007 -163727576 + MIR3 SINE MIR 21 203 -5 890 126 0 15 chr2 89529807 89529942 -163726641 + FLAM_C SINE Alu 1 133 0 2476 64 0 14 chr2 89530063 89530358 -163726225 + AluY SINE Alu 3 293 -18 2173 115 0 16 chr2 89530501 89530805 -163725778 - AluSx SINE Alu -13 299 1 1691 170 38 17 chr2 89531279 89531567 -163725016 - AluJo SINE Alu -10 302 9 393 155 10 113 chr2 89532085 89532130 -163724453 + MER5B DNA MER1_type 1 32 -146 2366 74 0 27 chr2 89532130 89532429 -163724154 - AluSg1 SINE Alu -13 296 6 393 155 10 113 chr2 89532429 89532480 -163724103 + MER5B DNA MER1_type 32 87 -91 387 277 10 10 chr2 89532499 89532600 -163723983 + MER20 DNA MER1_type 110 210 -9 516 169 113 48 chr2 89532650 89532774 -163723809 - FLAM_C SINE Alu -11 132 1 290 238 16 0 chr2 89532774 89532837 -163723746 + MER5B DNA MER1_type 115 178 0 356 165 28 119 chr2 89532860 89532969 -163723614 + MER5A DNA MER1_type 11 109 -80 497 315 103 14 chr2 89533190 89533403 -163723180 - MIR SINE MIR -14 248 17 2311 118 0 3 chr2 89533736 89534041 -163722542 - AluSx SINE Alu -8 304 1 1892 160 40 0 chr2 89534241 89534541 -163722042 + AluJo SINE Alu 1 312 0 225 244 0 0 chr2 89535531 89535576 -163721007 + L2 LINE L2 3266 3310 -3 453 306 123 21 chr2 89536396 89536631 -163719952 - LTR16B LTR ERVL -154 310 52 220 324 149 9 chr2 89536690 89536912 -163719671 + L2 LINE L2 2021 2273 -1041 564 146 11 0 chr2 89536914 89537003 -163719580 - AluSg/x SINE Alu -36 274 185 302 0 26 0 chr2 89537009 89537047 -163719536 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 2388 100 0 0 chr2 89537051 89537350 -163719233 - AluSx SINE Alu -13 299 1 185 237 0 34 chr2 89537356 89537406 -163719177 + L2 LINE L2 2312 2361 -953 1702 163 79 4 chr2 89537406 89537683 -163718900 + AluJo SINE Alu 2 299 -13 2141 116 10 3 chr2 89537702 89537995 -163718588 - AluSx SINE Alu -17 295 1 476 263 104 62 chr2 89538065 89538386 -163718197 - LTR41 LTR ERVL -36 737 331 1698 253 73 63 chr2 89538389 89538430 -163718153 - ERVL LTR ERVL -2724 3040 3001 216 97 0 0 chr2 89538430 89538461 -163718122 + (CGTG)n Simple_repeat Simple_repeat 1 31 0 1698 253 73 63 chr2 89538461 89538560 -163718023 - ERVL LTR ERVL -2763 3001 2904 198 0 0 0 chr2 89538560 89538582 -163718001 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 2499 48 0 3 chr2 89538584 89538873 -163717710 - AluY SINE Alu -21 290 3 1698 253 73 63 chr2 89538873 89539248 -163717335 - ERVL LTR ERVL -2860 2904 2512 1339 141 129 0 chr2 89539248 89539511 -163717072 + AluJo SINE Alu 5 301 -1 1698 253 73 63 chr2 89539511 89539579 -163717004 - ERVL LTR ERVL -3252 2512 2446 214 337 84 42 chr2 89539579 89539769 -163716814 + L2 LINE L2 2538 2735 -579 2137 130 0 9 chr2 89539857 89540172 -163716411 - AluJb SINE Alu 0 312 1 183 42 0 0 chr2 89540498 89540522 -163716061 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2259 79 14 0 chr2 89540528 89540805 -163715778 - AluSp SINE Alu -32 281 1 531 236 46 7 chr2 89541292 89541494 -163715089 + L1ME LINE L1 5289 5496 -666 2009 116 0 0 chr2 89541525 89541783 -163714800 + AluSx SINE Alu 1 258 -54 27 0 0 0 chr2 89541783 89541810 -163714773 + AT_rich Low_complexity Low_complexity 1 27 0 327 273 145 72 chr2 89541812 89542061 -163714522 + L1ME LINE L1 5463 5729 -392 2370 69 0 50 chr2 89542070 89542387 -163714196 + AluY SINE Alu 1 301 -10 488 159 186 9 chr2 89542393 89542506 -163714077 + FRAM SINE Alu 1 133 -43 1632 157 11 36 chr2 89543463 89543641 -163712942 - AluJb SINE Alu -4 308 138 2071 134 16 10 chr2 89543641 89543946 -163712637 - AluSq SINE Alu -6 307 1 1632 157 11 36 chr2 89543946 89544047 -163712536 - AluJb SINE Alu -174 138 36 23 0 0 0 chr2 89544189 89544212 -163712371 + AT_rich Low_complexity Low_complexity 1 23 0 779 154 13 20 chr2 89544494 89544643 -163711940 - LTR7 LTR ERV1 0 450 303 899 110 8 18 chr2 89544832 89545000 -163711583 - LTR7 LTR ERV1 -232 218 1 2004 109 3 66 chr2 89545353 89545676 -163710907 - AluSx SINE Alu 0 304 1 254 261 30 67 chr2 89546529 89546663 -163709920 - MIR3 SINE MIR -68 140 12 2221 100 3 42 chr2 89546976 89547287 -163709296 - AluSx SINE Alu -12 300 2 2338 100 3 16 chr2 89547298 89547608 -163708975 - AluSq SINE Alu -7 306 1 2458 95 3 0 chr2 89549414 89549720 -163706863 + AluSq SINE Alu 3 309 -4 194 288 45 0 chr2 89549732 89549798 -163706785 - MIR3 SINE MIR -11 197 129 195 274 75 47 chr2 89550828 89550934 -163705649 - MIR SINE MIR -123 139 31 490 347 55 15 chr2 89550947 89551290 -163705293 + L2 LINE L2 2223 2579 -735 1844 129 12 0 chr2 89551315 89551570 -163705013 - AluSx SINE Alu -9 303 46 235 342 97 0 chr2 89551824 89551938 -163704645 + L2 LINE L2 3143 3267 -5 208 337 0 0 chr2 89552992 89553081 -163703502 + (TG)n Simple_repeat Simple_repeat 2 90 0 389 12 12 99 chr2 89553171 89553252 -163703331 + (TG)n Simple_repeat Simple_repeat 2 75 0 267 196 19 37 chr2 89553269 89553376 -163703207 + (TG)n Simple_repeat Simple_repeat 2 106 0 207 0 0 0 chr2 89553425 89553448 -163703135 + (TG)n Simple_repeat Simple_repeat 2 24 0 261 0 0 0 chr2 89553495 89553524 -163703059 + (TG)n Simple_repeat Simple_repeat 2 30 0 230 94 31 78 chr2 89554314 89554378 -163702205 + (TCCA)n Simple_repeat Simple_repeat 3 63 0 600 176 28 6 chr2 89554390 89554566 -163702017 + (CATCC)n Simple_repeat Simple_repeat 1 180 0 377 228 35 26 chr2 89554923 89555037 -163701546 + MIR SINE MIR 34 148 -114 1564 163 4 8 chr2 89556176 89556428 -163700155 + AluJo SINE Alu 1 251 -61 872 291 88 24 chr2 89556885 89556949 -163699634 - MLT1J2 LTR MaLR -1 449 391 2052 155 0 22 chr2 89556949 89557266 -163699317 - AluSx SINE Alu -2 310 1 2365 95 0 10 chr2 89557271 89557575 -163699008 - AluSx SINE Alu -11 301 1 872 291 88 24 chr2 89557575 89557913 -163698670 - MLT1J2 LTR MaLR -62 388 15 3181 175 39 82 chr2 89558776 89559186 -163697397 + L1MB3 LINE L1 5421 5782 -401 2282 86 0 0 chr2 89559186 89559465 -163697118 + AluSg SINE Alu 1 279 -31 3181 175 39 82 chr2 89559465 89559850 -163696733 + L1MB3 LINE L1 5782 6182 -1 1839 172 105 9 chr2 89560940 89561359 -163695224 + MLT1C LTR MaLR 1 459 -8 300 188 24 59 chr2 89561810 89561895 -163694688 + MLT1L LTR MaLR 9 90 -525 400 254 58 83 chr2 89561932 89562172 -163694411 + MLT1L LTR MaLR 162 395 -220 202 175 0 48 chr2 89562315 89562378 -163694205 + GA-rich Low_complexity Low_complexity 2 61 0 2336 106 0 3 chr2 89562768 89563070 -163693513 - AluSq SINE Alu -12 301 1 409 256 50 16 chr2 89563301 89563422 -163693161 - L2 LINE L2 -1 3312 3188 460 121 0 0 chr2 89563851 89563917 -163692666 + FLAM_A SINE Alu 60 125 -17 242 331 16 40 chr2 89563926 89564050 -163692533 - MLT1K LTR MaLR -69 519 399 2135 91 0 4 chr2 89564165 89564441 -163692142 - AluSx SINE Alu -37 275 1 235 122 0 0 chr2 89564561 89564602 -163691981 - L1MB2 LINE L1 0 6171 6131 287 327 73 0 chr2 89564714 89564824 -163691759 + L1ME LINE L1 5491 5608 -513 2258 104 3 0 chr2 89564845 89565144 -163691439 + AluSp SINE Alu 4 303 -10 1683 213 23 44 chr2 89565156 89565636 -163690947 - L1ME2 LINE L1 -2 6162 5693 228 67 0 0 chr2 89565637 89565667 -163690916 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 785 84 49 0 chr2 89565741 89565884 -163690699 + L1MA7 LINE L1 6140 6289 -2 2562 161 14 50 chr2 89565887 89566306 -163690277 - L1MB4 LINE L1 -10 6170 5776 1920 162 3 3 chr2 89566306 89566609 -163689974 - AluJo SINE Alu -9 303 1 2562 161 14 50 chr2 89566609 89566766 -163689817 - L1MB4 LINE L1 -404 5776 5615 1279 232 50 36 chr2 89566767 89567045 -163689538 - L1ME2 LINE L1 -460 5704 5417 2246 114 0 3 chr2 89567045 89567342 -163689241 + AluSx SINE Alu 1 296 -16 1279 232 50 36 chr2 89567342 89567481 -163689102 - L1ME2 LINE L1 -747 5417 5281 422 257 78 0 chr2 89567484 89567747 -163688836 + L1MC/D LINE L1 4808 5112 -1034 694 44 0 0 chr2 89567750 89567841 -163688742 - AluSc SINE Alu -8 301 211 378 305 0 31 chr2 89568269 89568397 -163688186 + MIR SINE MIR 21 144 -118 1674 174 24 7 chr2 89568704 89568998 -163687585 + AluJb SINE Alu 1 299 -13 2356 112 3 0 chr2 89569091 89569403 -163687180 + AluSq SINE Alu 1 313 0 258 229 128 0 chr2 89569434 89569540 -163687043 + MLT1J LTR MaLR 93 277 -332 231 318 9 9 chr2 89569771 89569881 -163686702 + L1MC/D LINE L1 5772 5881 -1927 353 82 0 0 chr2 89569928 89569977 -163686606 - MER53 DNA DNA -64 125 77 180 329 7 95 chr2 89572243 89572289 -163684294 + MIR SINE MIR 136 184 -78 1885 167 7 0 chr2 89572289 89572588 -163683995 - AluJb SINE Alu -11 301 1 180 329 7 95 chr2 89572588 89572678 -163683905 + MIR SINE MIR 184 260 -2 568 315 28 6 chr2 89573580 89573758 -163682825 + MIR SINE MIR 11 192 -70 236 304 0 29 chr2 89574576 89574645 -163681938 - L2 LINE L2 -20 3252 3186 839 290 63 75 chr2 89574878 89575450 -163681133 - MLT1K LTR MaLR 0 588 24 2141 228 92 59 chr2 89575484 89575764 -163680819 + L1MC4 LINE L1 6913 7182 -860 198 0 0 0 chr2 89575764 89575786 -163680797 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 903 199 0 0 chr2 89575787 89575948 -163680635 - FAM SINE Alu -14 161 1 2141 228 92 59 chr2 89575948 89576188 -163680395 + L1MC4 LINE L1 7182 7413 -629 2048 112 3 39 chr2 89576188 89576500 -163680083 - AluSx SINE Alu -7 305 5 2141 228 92 59 chr2 89576500 89576935 -163679648 + L1MC4 LINE L1 7413 7983 -59 1155 156 102 59 chr2 89577005 89577036 -163679547 + MSTB1 LTR MaLR 24 52 -380 2095 102 60 0 chr2 89577036 89577319 -163679264 + AluSp SINE Alu 1 300 -13 1155 156 102 59 chr2 89577319 89577543 -163679040 + MSTB1 LTR MaLR 52 290 -142 518 100 120 80 chr2 89577545 89577645 -163678938 - AluSg/x SINE Alu -22 290 187 2125 245 70 25 chr2 89577645 89578498 -163678085 - L1M4 LINE L1 -2182 4775 3884 1416 175 4 9 chr2 89578507 89578735 -163677848 - AluJo SINE Alu -85 227 1 1402 230 8 8 chr2 89578735 89579109 -163677474 - L1M4 LINE L1 -3059 3898 3525 478 188 34 26 chr2 89579140 89579257 -163677326 - L1M4 LINE L1 -4823 2136 2019 881 132 13 0 chr2 89579279 89579431 -163677152 + CT-rich Low_complexity Low_complexity 2 155 0 2104 110 0 14 chr2 89579432 89579714 -163676869 - AluSx SINE Alu -33 279 2 2428 188 51 57 chr2 89579717 89580099 -163676484 - L1M4 LINE L1 -4833 2022 1639 2273 109 13 0 chr2 89580099 89580403 -163676180 - AluSq SINE Alu -1 312 5 2428 188 51 57 chr2 89580403 89581020 -163675563 - L1M4 LINE L1 -5216 1639 1025 1111 128 5 87 chr2 89581031 89581249 -163675334 - MER21A LTR ERV1 -19 912 713 213 156 0 0 chr2 89581250 89581282 -163675301 - MIR SINE MIR -190 72 41 182 182 0 0 chr2 89582424 89582457 -163674126 + L2 LINE L2 2426 2458 -856 2088 125 8 70 chr2 89583196 89583565 -163673018 - MER7A DNA MER2_type -1 345 2 567 235 94 41 chr2 89583725 89583895 -163672688 - MIR SINE MIR -12 250 72 780 249 19 16 chr2 89583967 89584251 -163672332 + L1MC4a LINE L1 6413 6611 -1197 2844 195 58 28 chr2 89584344 89585017 -163671566 + L1MC4a LINE L1 7116 7808 0 278 104 0 21 chr2 89585499 89585547 -163671036 + (ATG)n Simple_repeat Simple_repeat 2 48 0 319 294 185 16 chr2 89585555 89585739 -163670844 - MIR SINE MIR -27 235 21 313 250 29 29 chr2 89586322 89586426 -163670157 + MIR3 SINE MIR 78 181 -27 403 227 41 0 chr2 89588516 89588613 -163667970 - MER81 DNA DNA -9 105 5 529 265 60 0 chr2 89589218 89589384 -163667199 - MER5B DNA MER1_type -2 176 1 417 320 26 20 chr2 89589562 89589691 -163666892 - MIR3 SINE MIR -25 183 50 2129 115 0 7 chr2 89589691 89590019 -163666564 + AluJb SINE Alu 1 326 0 417 320 26 20 chr2 89590019 89590041 -163666542 - MIR3 SINE MIR -158 50 30 1155 215 0 5 chr2 89590047 89590256 -163666327 + MER6B DNA MER2_type 3 210 0 2755 175 56 61 chr2 89590268 89590391 -163666192 + MLT1F1 LTR MaLR 1 123 -444 1843 189 0 0 chr2 89590391 89590697 -163665886 - AluJo SINE Alu -6 306 1 2755 175 56 61 chr2 89590697 89591143 -163665440 + MLT1F1 LTR MaLR 123 567 0 434 246 35 18 chr2 89591898 89592012 -163664571 - MLT2E LTR ERVL -479 149 34 431 204 31 0 chr2 89592243 89592341 -163664242 + L1MA8 LINE L1 6046 6146 -145 776 147 51 6 chr2 89592392 89592548 -163664035 + L1MA7 LINE L1 6125 6287 -4 334 232 73 0 chr2 89592765 89592847 -163663736 - MER103 DNA DNA -7 159 72 290 310 62 41 chr2 89593354 89593499 -163663084 - MER91B DNA MER1_type -34 156 9 2437 70 0 3 chr2 89593798 89594098 -163662485 - AluY SINE Alu -12 299 1 293 335 15 51 chr2 89594610 89594793 -163661790 + MIR3 SINE MIR 2 183 -62 782 298 114 13 chr2 89595391 89595912 -163660671 - L2 LINE L2 -99 3214 2635 772 231 159 31 chr2 89595946 89596267 -163660316 - MLT1I LTR MaLR 0 409 48 993 183 9 16 chr2 89596351 89596689 -163659894 - MER72 LTR ERV1 -1 721 335 1038 205 22 18 chr2 89596708 89596937 -163659646 - MER72 LTR ERV1 -492 230 1 225 283 22 54 chr2 89596938 89597030 -163659553 - L2 LINE L2 -787 2527 2439 362 248 9 35 chr2 89597072 89597185 -163659398 - L2 LINE L2 -993 2321 2212 1217 188 8 29 chr2 89597206 89597451 -163659132 + MLT2B1 LTR ERVL 279 518 -2 261 167 21 0 chr2 89597487 89597535 -163659048 - L1MC/D LINE L1 -2252 5556 5508 2190 133 10 0 chr2 89597563 89597871 -163658712 + AluSx SINE Alu 1 311 -1 443 271 21 40 chr2 89597902 89598077 -163658506 + MIR SINE MIR 3 178 -30 995 234 110 7 chr2 89598248 89598538 -163658045 - MER5C DNA MER1_type -4 320 1 1588 147 40 4 chr2 89599042 89599293 -163657290 - AluJo SINE Alu -11 301 42 2181 268 69 67 chr2 89599397 89600814 -163655769 - HAL1 LINE L1 -1084 1423 4 313 254 8 62 chr2 89600813 89600943 -163655640 + HAL1 LINE L1 793 915 -1592 * 423 294 7 0 chr2 89601103 89601246 -163655337 + L1ME4a LINE L1 5675 5818 -303 727 142 0 82 chr2 89601263 89601397 -163655186 + FLAM_A SINE Alu 5 127 -6 1930 173 10 7 chr2 89601425 89601732 -163654851 + AluJo SINE Alu 1 308 -4 1856 88 99 15 chr2 89601859 89602147 -163654436 - AluSq SINE Alu 0 310 1 364 258 32 19 chr2 89602168 89602323 -163654260 + L1ME4a LINE L1 5957 6113 -8 364 317 88 48 chr2 89602353 89602580 -163654003 + L1ME4a LINE L1 5605 5840 -281 189 338 29 0 chr2 89602723 89602791 -163653792 + L2 LINE L2 3143 3212 -60 286 165 46 55 chr2 89602800 89602909 -163653674 + L1ME4a LINE L1 6008 6115 -6 737 116 9 0 chr2 89603463 89603575 -163653008 - U1 snRNA snRNA -52 113 1 586 270 58 56 chr2 89603987 89604250 -163652333 - MIR SINE MIR 0 262 13 2350 86 13 0 chr2 89605713 89606015 -163650568 - AluSq SINE Alu -7 306 1 2583 27 10 3 chr2 89607263 89607557 -163649026 - AluY SINE Alu -15 296 1 247 290 59 95 chr2 89607945 89608114 -163648469 - L2 LINE L2 -162 3110 2948 288 0 0 0 chr2 89608174 89608206 -163648377 + (GA)n Simple_repeat Simple_repeat 1 32 0 330 307 21 29 chr2 89609692 89609832 -163646751 + GA-rich Low_complexity Low_complexity 2 140 0 331 263 35 9 chr2 89609832 89609946 -163646637 - MLT1J LTR MaLR -17 494 378 464 286 79 10 chr2 89610040 89610243 -163646340 - MLT1J LTR MaLR -271 240 24 416 281 58 0 chr2 89610732 89610871 -163645712 - MLT1L LTR MaLR -2 613 467 441 223 165 62 chr2 89611000 89611242 -163645341 - MLT1L LTR MaLR -328 287 21 248 268 0 0 chr2 89611281 89611337 -163645246 - MER117 DNA MER1_type -139 58 3 1902 155 0 39 chr2 89611442 89611752 -163644831 + AluJo SINE Alu 5 302 -10 2490 179 73 6 chr2 89611769 89612273 -163644310 + MLT1F1 LTR MaLR 13 550 -17 600 233 100 0 chr2 89612289 89612439 -163644144 + MER96 DNA MER1_type? 11 175 0 1656 181 59 0 chr2 89612521 89612692 -163643891 - AluJo SINE Alu -8 304 108 276 30 0 0 chr2 89612692 89612725 -163643858 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 1656 181 59 0 chr2 89612725 89612840 -163643743 - AluJo SINE Alu -204 108 1 532 312 96 34 chr2 89612882 89613289 -163643294 + MLT1K LTR MaLR 134 565 -23 1134 254 66 35 chr2 89613993 89614387 -163642196 - MLT1I LTR MaLR -3 406 1 326 233 164 34 chr2 89614778 89614867 -163641716 - MIR SINE MIR 0 262 186 1889 173 0 3 chr2 89614867 89615174 -163641409 + AluJo SINE Alu 1 306 -6 326 233 164 34 chr2 89615174 89615230 -163641353 - MIR SINE MIR -76 186 98 1051 212 54 88 chr2 89615510 89615883 -163640700 + L1MC4a LINE L1 6672 6921 -887 251 369 32 21 chr2 89616212 89616399 -163640184 - MER5A DNA MER1_type 0 189 1 420 20 0 0 chr2 89617951 89618000 -163638583 + (TG)n Simple_repeat Simple_repeat 2 50 0 238 289 54 34 chr2 89618278 89618427 -163638156 - L2 LINE L2 -164 3108 2957 721 258 40 18 chr2 89618429 89618654 -163637929 - MIR SINE MIR -12 250 21 335 290 43 0 chr2 89619182 89619275 -163637308 + MIR3 SINE MIR 74 170 -38 225 0 0 0 chr2 89619955 89619980 -163636603 + (A)n Simple_repeat Simple_repeat 1 25 0 896 249 5 5 chr2 89619998 89620191 -163636392 - MER117 DNA MER1_type 0 197 5 238 237 0 34 chr2 89620191 89620250 -163636333 + MIR3 SINE MIR 151 207 -1 183 42 0 0 chr2 89620605 89620629 -163635954 + (GAA)n Simple_repeat Simple_repeat 2 25 0 257 315 0 0 chr2 89621882 89621974 -163634609 - L2 LINE L2 -253 3060 2969 359 307 90 28 chr2 89621977 89622262 -163634321 + L2 LINE L2 2981 3281 -32 2240 132 0 3 chr2 89622351 89622661 -163633922 - AluSx SINE Alu -3 309 1 1811 254 39 12 chr2 89622953 89623442 -163633141 - L2 LINE L2 -1 3312 2811 492 205 163 42 chr2 89623465 89623680 -163632903 - MLT1H LTR MaLR 0 549 302 318 234 21 11 chr2 89623791 89623885 -163632698 - MLT1H LTR MaLR -368 181 87 221 261 114 11 chr2 89623923 89624011 -163632572 - L2 LINE L2 -546 2768 2672 298 278 127 39 chr2 89625012 89625072 -163631511 + MIR SINE MIR 10 63 -199 2578 56 0 3 chr2 89625072 89625374 -163631209 - AluY SINE Alu -8 303 3 298 278 127 39 chr2 89625374 89625493 -163631090 + MIR SINE MIR 63 204 -58 285 269 26 0 chr2 89626165 89626243 -163630340 - MIR SINE MIR -127 135 56 321 324 63 0 chr2 89626689 89626800 -163629783 - MIR SINE MIR -36 226 109 180 0 0 0 chr2 89627421 89627441 -163629142 + (TG)n Simple_repeat Simple_repeat 2 21 0 224 350 83 23 chr2 89627441 89627658 -163628925 - MIR SINE MIR -29 233 4 858 240 60 14 chr2 89628040 89628257 -163628326 - MIR SINE MIR -3 259 33 197 257 0 71 chr2 89628335 89628405 -163628178 - MIR SINE MIR -74 188 124 232 236 18 0 chr2 89629288 89629343 -163627240 + G-rich Low_complexity Low_complexity 3 58 0 25 75 0 0 chr2 89629364 89629417 -163627166 + GC_rich Low_complexity Low_complexity 1 53 0 242 282 0 3 chr2 89631124 89631195 -163625388 + MIR SINE MIR 54 123 -85 198 0 0 0 chr2 89631392 89631414 -163625169 + (TGGGGG)n Simple_repeat Simple_repeat 3 24 0 228 354 35 3 chr2 89631599 89631755 -163624828 - MIR SINE MIR -30 178 15 340 216 46 14 chr2 89631852 89631971 -163624612 - MIR SINE MIR -63 145 66 199 200 127 0 chr2 89632526 89632581 -163624002 + MIR SINE MIR 82 143 -65 398 355 42 0 chr2 89632788 89632954 -163623629 + MIR SINE MIR 20 192 -70 2032 134 3 6 chr2 89632987 89633300 -163623283 - AluSx SINE Alu 0 312 1 455 257 118 40 chr2 89633407 89633559 -163623024 - MIR SINE MIR -6 256 93 192 40 0 0 chr2 89633904 89633929 -163622654 + (GTCTG)n Simple_repeat Simple_repeat 5 29 0 363 278 107 30 chr2 89634601 89634770 -163621813 - MIR SINE MIR -69 193 12 431 305 86 6 chr2 89635128 89635302 -163621281 - MIR SINE MIR -55 207 20 233 358 123 0 chr2 89635742 89635904 -163620679 + MIR SINE MIR 37 218 -44 393 240 62 0 chr2 89636041 89636137 -163620446 - MIR SINE MIR -109 153 52 445 319 84 0 chr2 89637339 89637505 -163619078 - MIR SINE MIR -34 228 49 274 254 28 0 chr2 89637640 89637711 -163618872 - L2 LINE L2 0 3272 3200 393 158 0 63 chr2 89637952 89638047 -163618536 - MER20 DNA MER1_type -1 218 130 249 158 0 0 chr2 89638089 89638127 -163618456 - MER20 DNA MER1_type -181 38 1 285 211 0 18 chr2 89638127 89638184 -163618399 + L2 LINE L2 3254 3309 -4 324 0 0 0 chr2 89639035 89639071 -163617512 + (TG)n Simple_repeat Simple_repeat 2 37 0 304 306 58 0 chr2 89639597 89639718 -163616865 + MIR3 SINE MIR 81 208 0 562 339 54 43 chr2 89639865 89640216 -163616367 - L2 LINE L2 0 3272 2918 523 298 105 5 chr2 89641178 89641369 -163615214 + MIR SINE MIR 5 214 -48 643 43 32 11 chr2 89642879 89642973 -163613610 + (TCCCC)n Simple_repeat Simple_repeat 2 97 0 195 162 0 0 chr2 89644423 89644460 -163612123 + GA-rich Low_complexity Low_complexity 2 38 0 188 243 204 19 chr2 89645235 89645338 -163611245 + MIR3 SINE MIR 59 180 -28 449 336 51 7 chr2 89645470 89645699 -163610884 - MIR SINE MIR -4 258 20 610 299 41 16 chr2 89646573 89646767 -163609816 + MIR SINE MIR 13 211 -51 369 327 58 26 chr2 89647187 89647343 -163609240 - MIR SINE MIR -82 180 20 27 0 0 0 chr2 89647755 89647782 -163608801 + GC_rich Low_complexity Low_complexity 1 27 0 474 234 201 25 chr2 89650092 89650331 -163606252 + L2 LINE L2 2806 3086 -186 232 236 0 28 chr2 89650406 89650478 -163606105 + (TTATA)n Simple_repeat Simple_repeat 4 73 0 230 229 0 0 chr2 89650949 89650997 -163605586 - MLT1L LTR MaLR -224 391 344 268 348 40 0 chr2 89651263 89651391 -163605192 - MIR SINE MIR -51 211 79 275 286 112 9 chr2 89651644 89651760 -163604823 + MIR SINE MIR 30 155 -62 195 100 0 0 chr2 89652118 89652148 -163604435 + (CAGGG)n Simple_repeat Simple_repeat 4 33 0 329 261 68 0 chr2 89652461 89652549 -163604034 - L2 LINE L2 -24 3248 3155 409 331 0 8 chr2 89653075 89653208 -163603375 + L2 LINE L2 3181 3312 -1 868 274 22 13 chr2 89653412 89653638 -163602945 - MIR SINE MIR -34 228 1 234 274 0 0 chr2 89653644 89653695 -163602888 + (TG)n Simple_repeat Simple_repeat 1 51 0 195 211 18 70 chr2 89654994 89655051 -163601532 - MIR SINE MIR -116 146 93 * 399 328 89 6 chr2 89655043 89655223 -163601360 + MIR SINE MIR 60 254 -8 217 237 21 113 chr2 89655465 89655562 -163601021 - L2 LINE L2 -47 3266 3179 181 320 0 0 chr2 89655570 89655620 -163600963 + MIR SINE MIR 205 254 -8 251 222 32 0 chr2 89656003 89656066 -163600517 + L2 LINE L2 3247 3311 -2 258 316 49 31 chr2 89656442 89656667 -163599916 + L1ME4a LINE L1 5855 6083 -38 1793 146 4 0 chr2 89656681 89656949 -163599634 + AluSx SINE Alu 33 301 -11 1706 184 0 7 chr2 89656968 89657272 -163599311 + AluJb SINE Alu 11 312 0 322 179 0 0 chr2 89657278 89657334 -163599249 - MIR SINE MIR -128 134 79 207 0 0 0 chr2 89658044 89658067 -163598516 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1767 142 4 0 chr2 89658082 89658343 -163598240 - AluSx SINE Alu -34 278 17 620 259 76 0 chr2 89658353 89658511 -163598072 - L2 LINE L2 -16 3297 3128 2271 83 10 3 chr2 89658655 89658957 -163597626 + AluSq SINE Alu 5 308 -5 500 214 31 75 chr2 89659601 89659627 -163596956 + MER103 DNA DNA 1 27 -139 1629 173 31 17 chr2 89659627 89659916 -163596667 + AluJo SINE Alu 1 293 -19 500 214 31 75 chr2 89659916 89660048 -163596535 + MER103 DNA DNA 27 152 -14 398 298 0 9 chr2 89660105 89660219 -163596364 - MIR3 SINE MIR -54 154 42 536 279 27 7 chr2 89661675 89661822 -163594761 - MIR3 SINE MIR -26 182 33 245 200 0 18 chr2 89662069 89662124 -163594459 + MIR SINE MIR 23 76 -186 411 316 136 19 chr2 89663677 89663832 -163592751 - MIR SINE MIR -72 190 18 370 377 33 55 chr2 89664602 89664931 -163591652 - L2 LINE L2 -5 3267 2946 694 183 16 102 chr2 89664931 89665117 -163591466 - MER5B DNA MER1_type -8 170 1 320 308 19 0 chr2 89667053 89667157 -163589426 - MER117 DNA MER1_type -56 141 36 302 172 35 0 chr2 89668808 89668866 -163587717 + THE1C LTR MaLR 316 375 0 3395 177 44 9 chr2 89668866 89669854 -163586729 + L1MB8 LINE L1 4972 6002 -176 1483 112 9 0 chr2 89669956 89670170 -163586413 + AluSg/x SINE Alu 97 312 0 404 372 84 22 chr2 89670180 89670454 -163586129 - L2 LINE L2 -401 2913 2623 198 188 0 42 chr2 89670547 89670595 -163585988 - L2 LINE L2 -84 3229 3184 592 337 175 26 chr2 89670831 89670923 -163585660 - L3 LINE CR1 -3 1574 1497 2200 97 7 0 chr2 89670923 89671212 -163585371 - AluSq SINE Alu -22 291 1 592 337 175 26 chr2 89671212 89671771 -163584812 - L3 LINE CR1 -80 1497 826 327 319 24 5 chr2 89672365 89672490 -163584093 - MIR3 SINE MIR -29 179 53 798 246 16 16 chr2 89672578 89672769 -163583814 + MIR SINE MIR 8 198 -64 316 231 13 0 chr2 89673156 89673234 -163583349 - MER103 DNA DNA -80 86 8 1674 177 11 69 chr2 89673253 89673688 -163582895 - L1MB4 LINE L1 -5 6175 5766 558 222 49 7 chr2 89675525 89675669 -163580914 + MIR3 SINE MIR 32 181 -27 302 282 120 5 chr2 89676435 89676644 -163579939 + L2 LINE L2 1859 2091 -1223 955 246 130 36 chr2 89676781 89677053 -163579530 + L2 LINE L2 2752 2997 -316 2072 106 3 0 chr2 89677053 89677367 -163579216 - AluSx SINE Alu 0 315 1 955 246 130 36 chr2 89677367 89677568 -163579015 + L2 LINE L2 2997 3268 -45 335 278 128 38 chr2 89677642 89678009 -163578574 - L1MB4 LINE L1 -445 5717 5318 499 259 38 25 chr2 89678568 89678726 -163577857 - MER117 DNA MER1_type -37 160 1 423 251 62 62 chr2 89679446 89679673 -163576910 - L1ME4a LINE L1 -44 6077 5851 1023 268 78 45 chr2 89679810 89679979 -163576604 + MLT1J LTR MaLR 45 207 -304 1954 196 175 14 chr2 89679979 89680465 -163576118 + MLT1F1 LTR MaLR 4 567 0 1023 268 78 45 chr2 89680465 89680695 -163575888 + MLT1J LTR MaLR 207 457 -54 1978 148 78 20 chr2 89680807 89681152 -163575431 + MLT1A1 LTR MaLR 1 365 0 1422 226 19 17 chr2 89681804 89682166 -163574417 + MLT1A1 LTR MaLR 1 363 -2 2135 128 0 3 chr2 89682360 89682673 -163573910 + AluSx SINE Alu 1 312 0 1040 260 0 4 chr2 89683040 89683317 -163573266 + AluSx SINE Alu 37 312 0 2019 164 27 0 chr2 89683637 89684003 -163572580 - L1MB4 LINE L1 0 6180 5805 284 240 111 17 chr2 89684371 89684557 -163572026 - MIR3 SINE MIR -54 208 7 273 320 0 0 chr2 89685024 89685099 -163571484 + (TA)n Simple_repeat Simple_repeat 1 75 0 432 174 0 141 chr2 89685191 89685312 -163571271 - MIR SINE MIR 0 262 159 957 273 99 26 chr2 89685321 89685743 -163570840 + L1MC4a LINE L1 5391 5843 -1965 2715 96 3 6 chr2 89685747 89686111 -163570472 - THE1B LTR MaLR -1 363 1 614 268 26 7 chr2 89686237 89686390 -163570193 + MIR SINE MIR 2 157 -105 22 0 0 0 chr2 89686460 89686482 -163570101 + AT_rich Low_complexity Low_complexity 1 22 0 253 254 82 36 chr2 89687294 89687404 -163569179 - MLT1L LTR MaLR 0 615 501 233 243 65 142 chr2 89687431 89687768 -163568815 - MLT1J LTR MaLR -174 337 27 1082 256 50 65 chr2 89688295 89688525 -163568058 - MLT1I LTR MaLR -12 397 173 1763 139 10 21 chr2 89688525 89688834 -163567749 - AluSx SINE Alu 0 306 1 1082 256 50 65 chr2 89688834 89689005 -163567578 - MLT1I LTR MaLR -236 173 1 244 259 0 0 chr2 89689005 89689059 -163567524 + MIR SINE MIR 86 139 -69 739 215 32 109 chr2 89689117 89689428 -163567155 + L1M4 LINE L1 4925 5211 -935 * 806 236 48 56 chr2 89689424 89689674 -163566909 + L1MD2 LINE L1 6095 6342 -17 1881 153 10 0 chr2 89689687 89689981 -163566602 + AluJb SINE Alu 1 297 -15 627 241 16 131 chr2 89690197 89690570 -163566013 - MER46C DNA MER2_type -2 336 7 380 246 54 31 chr2 89690906 89691036 -163565547 - MIR3 SINE MIR -3 205 73 26 50 0 0 chr2 89691343 89691383 -163565200 + GC_rich Low_complexity Low_complexity 1 40 0 458 254 155 33 chr2 89691880 89692093 -163564490 + MIR SINE MIR 21 259 -3 472 260 107 0 chr2 89692193 89692343 -163564240 - MIR SINE MIR -36 226 61 2170 103 3 0 chr2 89692830 89693130 -163563453 + AluSx SINE Alu 1 301 -11 317 324 54 27 chr2 89693714 89693825 -163562758 + MIR SINE MIR 20 133 -75 382 253 23 0 chr2 89694623 89694710 -163561873 - MIR SINE MIR -113 149 61 2134 157 4 62 chr2 89696243 89696696 -163559887 + L1PB4 LINE L1 5730 6156 0 27 29 0 0 chr2 89696953 89696987 -163559596 + AT_rich Low_complexity Low_complexity 1 34 0 280 241 27 62 chr2 89697296 89697385 -163559198 - MIR SINE MIR -141 121 35 2377 51 0 0 chr2 89697385 89697678 -163558905 - AluY SINE Alu -18 293 1 280 241 27 62 chr2 89697678 89697700 -163558883 - MIR SINE MIR -227 35 14 270 152 0 22 chr2 89697882 89697928 -163558655 - MER69 DNA AcHobo -1746 780 736 279 246 158 18 chr2 89698318 89698432 -163558151 + LTR50 LTR ERVL 17 146 -649 210 191 0 0 chr2 89698460 89698502 -163558081 + (CAG)n Simple_repeat Simple_repeat 2 43 0 324 263 12 0 chr2 89698605 89698685 -163557898 + LTR33A LTR ERVL 443 523 0 2249 103 0 0 chr2 89698874 89699176 -163557407 - AluSg SINE Alu -8 302 1 281 220 21 85 chr2 89699177 89699283 -163557300 - L1ME LINE L1 -460 5702 5603 870 222 98 31 chr2 89699479 89699704 -163556879 + MIR SINE MIR 19 258 -4 280 148 0 33 chr2 89699704 89699765 -163556818 - L1MC/D LINE L1 -2053 5755 5697 243 136 0 0 chr2 89699777 89699821 -163556762 - L1MB2 LINE L1 0 6171 6128 577 252 46 6 chr2 89700100 89700275 -163556308 + MIR SINE MIR 2 185 -63 1731 173 3 3 chr2 89700289 89700572 -163556011 - MLT1A1 LTR MaLR 0 365 83 351 184 143 20 chr2 89700615 89700713 -163555870 - 7SK RNA RNA -18 175 66 594 154 17 0 chr2 89700729 89700846 -163555737 - L1MCb LINE L1 -4851 1194 1076 1844 236 77 47 chr2 89700892 89702144 -163554439 + L1MEc LINE L1 1561 2787 -3428 963 219 159 83 chr2 89702161 89702304 -163554279 + MLT1B LTR MaLR 15 146 -244 1818 169 0 0 chr2 89702304 89702606 -163553977 - AluJb SINE Alu -8 304 3 963 219 159 83 chr2 89702606 89702883 -163553700 + MLT1B LTR MaLR 146 390 0 279 231 22 11 chr2 89702884 89702975 -163553608 + L1MEc LINE L1 2784 2875 -3340 392 171 29 0 chr2 89702975 89703045 -163553538 - MER69 DNA AcHobo -2454 72 1 272 36 268 18 chr2 89703225 89703281 -163553302 - MLT2A1 LTR ERVL 0 444 375 226 140 80 10 chr2 89703282 89703382 -163553201 + (TATAA)n Simple_repeat Simple_repeat 1 107 0 332 256 64 48 chr2 89703386 89703511 -163553072 + L1MCa LINE L1 1941 2067 -4359 3046 57 36 5 chr2 89703524 89703912 -163552671 - MLT2A1 LTR ERVL -44 400 1 5707 199 46 8 chr2 89704500 89705138 -163551445 - L1MB7 LINE L1 -1 6183 5571 2254 79 0 38 chr2 89705138 89705456 -163551127 - AluSc SINE Alu -3 306 1 5707 199 46 8 chr2 89705456 89706530 -163550053 - L1MB7 LINE L1 -613 5571 4369 1891 148 0 3 chr2 89706530 89706820 -163549763 - AluSx SINE Alu -21 291 3 5707 199 46 8 chr2 89706820 89707220 -163549363 - L1MB7 LINE L1 -1815 4369 3986 202 316 88 7 chr2 89707774 89707910 -163548673 - MIR3 SINE MIR -55 153 7 2099 102 0 7 chr2 89709396 89709720 -163546863 + AluSx SINE Alu 1 322 0 442 86 0 0 chr2 89710005 89710063 -163546520 - AluSg/x SINE Alu -185 125 68 1913 174 40 3 chr2 89710743 89711094 -163545489 + MLT1A1 LTR MaLR 1 364 -1 288 0 0 0 chr2 89711094 89711126 -163545457 + (TG)n Simple_repeat Simple_repeat 1 32 0 224 343 0 0 chr2 89711807 89711877 -163544706 - L2 LINE L2 -10 3303 3234 636 143 0 19 chr2 89712047 89712152 -163544431 - AluSg/x SINE Alu -15 295 193 1364 154 5 5 chr2 89712206 89712426 -163544157 + AluJo SINE Alu 1 220 -92 830 162 63 0 chr2 89712426 89712568 -163544015 + AluJo SINE Alu 86 236 -76 15097 166 59 24 chr2 89712619 89712847 -163543736 + L1MA4 LINE L1 3006 3224 -4495 2201 112 0 0 chr2 89712847 89713152 -163543431 + AluY SINE Alu 1 305 -6 15097 166 59 24 chr2 89713152 89716860 -163539723 + L1MA4 LINE L1 3224 7071 -648 2273 121 26 9 chr2 89716860 89717207 -163539376 - THE1A LTR MaLR -2 353 1 3471 148 48 0 chr2 89717207 89717827 -163538756 + L1MA4 LINE L1 7065 7714 -5 1501 103 0 13 chr2 89720789 89721013 -163535570 + AluSg SINE Alu 1 221 -89 525 320 34 75 chr2 89721148 89721470 -163535113 - L3 LINE CR1 -731 846 538 214 260 130 40 chr2 89721759 89721859 -163534724 + L2 LINE L2 3161 3269 -3 2301 68 14 0 chr2 89722267 89722562 -163534021 - AluSp SINE Alu -14 299 1 848 261 173 27 chr2 89722566 89723122 -163533461 - L1ME4a LINE L1 -223 5898 5262 193 276 194 10 chr2 89723310 89723408 -163533175 + MER5B DNA MER1_type 6 121 -57 39 22 0 0 chr2 89723533 89723579 -163533004 + AT_rich Low_complexity Low_complexity 1 46 0 796 303 83 6 chr2 89724692 89725052 -163531531 - MARNA DNA Mariner -15 571 184 2029 116 0 26 chr2 89725418 89725720 -163530863 + AluSx SINE Alu 1 294 -18 1005 133 0 0 chr2 89726448 89726598 -163529985 - AluJo SINE Alu -162 150 1 1216 159 13 9 chr2 89727103 89727330 -163529253 + AluJb SINE Alu 85 312 0 1692 158 81 3 chr2 89728047 89728369 -163528214 + L1MB2 LINE L1 5825 6171 0 1610 173 0 32 chr2 89728603 89728915 -163527668 + AluJb SINE Alu 4 305 -7 1708 62 9 9 chr2 89728918 89729144 -163527439 + AluY SINE Alu 81 306 -5 306 0 0 0 chr2 89729360 89729394 -163527189 + (TG)n Simple_repeat Simple_repeat 2 35 0 2141 123 0 0 chr2 89730409 89730719 -163525864 - AluSg SINE Alu 0 310 1 410 283 40 35 chr2 89732059 89732257 -163524326 + L1ME1 LINE L1 5968 6166 0 275 321 0 62 chr2 89732261 89732373 -163524210 + MIR SINE MIR 38 142 -66 192 366 69 11 chr2 89733203 89733378 -163523205 + L2 LINE L2 2781 2965 -349 310 270 157 0 chr2 89734530 89734645 -163521938 + MIR SINE MIR 76 208 -54 1469 141 157 0 chr2 89734888 89735143 -163521440 + AluJo SINE Alu 1 295 -7 225 94 0 0 chr2 89735943 89735975 -163520608 + (GAAAA)n Simple_repeat Simple_repeat 3 34 0 198 0 0 0 chr2 89736118 89736140 -163520443 + (CA)n Simple_repeat Simple_repeat 2 23 0 189 372 13 0 chr2 89736918 89736996 -163519587 + L2 LINE L2 3224 3302 -11 2135 177 52 18 chr2 89737866 89738004 -163518579 + L1MD1 LINE L1 5777 5909 -333 2175 107 0 0 chr2 89738004 89738303 -163518280 - AluSg SINE Alu -11 299 1 2135 177 52 18 chr2 89738303 89738610 -163517973 + L1MD1 LINE L1 5909 6237 -5 552 242 49 62 chr2 89738610 89738854 -163517729 + L1MC5 LINE L1 7690 7930 -31 1132 251 112 29 chr2 89739019 89739438 -163517145 + MLT1J LTR MaLR 1 454 -57 262 326 47 0 chr2 89740402 89740488 -163516095 + L2 LINE L2 2224 2313 -1001 338 317 152 29 chr2 89740857 89741166 -163515417 + L2 LINE L2 2925 3271 -1 636 169 127 0 chr2 89741321 89741439 -163515144 + AluJo SINE Alu 2 134 -178 438 267 219 0 chr2 89741533 89741679 -163514904 + MER5A DNA MER1_type 11 188 -1 1789 149 132 66 chr2 89741802 89742226 -163514357 - LTR47A LTR ERVL 0 452 1 1766 153 0 29 chr2 89742601 89742908 -163513675 - AluJb SINE Alu -14 298 1 2394 74 0 0 chr2 89742919 89743216 -163513367 - AluSx SINE Alu -15 297 1 312 261 59 59 chr2 89743288 89743343 -163513240 + L1ME4a LINE L1 1195 1249 -4857 1582 184 17 0 chr2 89743343 89743642 -163512941 - AluJo SINE Alu -8 304 1 312 261 59 59 chr2 89743642 89743739 -163512844 + L1ME4a LINE L1 1248 6105 -1 511 256 58 77 chr2 89744402 89744609 -163511974 + L2 LINE L2 3111 3313 0 219 264 98 78 chr2 89744691 89744884 -163511699 + L2 LINE L2 2059 2255 -1059 619 117 8 10 chr2 89744949 89744976 -163511607 - L1MA5 LINE L1 -4 6296 6270 1886 93 46 0 chr2 89744976 89745235 -163511348 - AluSq SINE Alu -15 298 28 619 117 8 10 chr2 89745235 89745330 -163511253 - L1MA5 LINE L1 -30 6270 6178 1263 174 5 5 chr2 89745330 89745549 -163511034 - AluJb SINE Alu -7 305 87 849 122 1 4 chr2 89745549 89745691 -163510892 - L1MA4 LINE L1 -120 6180 6047 1956 74 4 8 chr2 89746641 89746898 -163509685 + AluSx SINE Alu 43 298 -14 242 236 0 0 chr2 89747408 89747463 -163509120 + LTR16A1 LTR ERVL 72 126 -331 244 294 112 42 chr2 89748101 89748244 -163508339 - MER5A DNA MER1_type -30 159 7 671 271 167 28 chr2 89748752 89749069 -163507514 + L2 LINE L2 2952 3312 -1 1710 157 7 10 chr2 89749358 89749652 -163506931 - AluJo SINE Alu -13 299 7 180 0 0 0 chr2 89749660 89749680 -163506903 + (T)n Simple_repeat Simple_repeat 1 20 0 248 349 32 8 chr2 89749710 89749836 -163506747 + MIR3 SINE MIR 73 201 -7 2114 101 23 3 chr2 89750749 89751055 -163505528 - AluSx SINE Alu 0 312 1 2554 302 96 8 chr2 89751234 89752003 -163504580 - L1MC4 LINE L1 -2 8040 7204 361 260 24 16 chr2 89752520 89752647 -163503936 - L1ME4a LINE L1 -46 6075 5948 740 203 7 0 chr2 89752733 89752871 -163503712 - MER105 DNA DNA -65 139 1 420 312 67 67 chr2 89752909 89753252 -163503331 - L2 LINE L2 -4 3268 2926 183 200 107 67 chr2 89754735 89754810 -163501773 + L3 LINE CR1 117 194 -1383 2049 120 0 3 chr2 89754818 89755117 -163501466 + AluSx SINE Alu 1 298 -14 2557 81 14 25 chr2 89755225 89755584 -163500999 + THE1A LTR MaLR 1 355 0 11550 84 33 3 chr2 89755584 89756828 -163499755 + THE1A-int LTR MaLR 1 1300 -280 2136 90 13 20 chr2 89756828 89757127 -163499456 + AluSx SINE Alu 1 297 -15 11550 84 33 3 chr2 89757127 89757417 -163499166 + THE1A-int LTR MaLR 1300 1580 0 2630 80 6 25 chr2 89757417 89757779 -163498804 + THE1A LTR MaLR 1 355 0 187 283 33 54 chr2 89758091 89758183 -163498400 - L2 LINE L2 -632 2682 2593 601 242 146 0 chr2 89758336 89758501 -163498082 + MIR SINE MIR 31 219 -43 464 213 66 66 chr2 89758592 89758803 -163497780 + Charlie5 DNA MER1_type 2375 2585 -27 2392 53 17 0 chr2 89759824 89760125 -163496458 + AluY SINE Alu 1 306 -5 753 290 42 0 chr2 89760160 89760419 -163496164 + L1ME3A LINE L1 5624 5893 -277 1155 162 4 31 chr2 89760424 89760652 -163495931 + AluJo SINE Alu 1 222 -90 671 254 28 6 chr2 89760652 89760829 -163495754 + L1ME3A LINE L1 5982 6162 -8 24 85 0 0 chr2 89763191 89763250 -163493333 + GC_rich Low_complexity Low_complexity 1 59 0 32 0 0 0 chr2 89763366 89763398 -163493185 + GC_rich Low_complexity Low_complexity 1 32 0 3003 133 111 10 chr2 89764183 89764306 -163492277 - MER41C LTR ERV1 0 554 445 1715 100 20 0 chr2 89764306 89764556 -163492027 + AluSx SINE Alu 1 255 -57 3003 133 111 10 chr2 89764556 89764935 -163491648 - MER41C LTR ERV1 -109 445 1 1803 138 10 3 chr2 89765431 89765721 -163490862 - AluJo SINE Alu -9 303 12 22 56 0 0 chr2 89765735 89765771 -163490812 + AT_rich Low_complexity Low_complexity 1 36 0 623 175 38 38 chr2 89765771 89765931 -163490652 + Charlie1 DNA MER1_type 2602 2761 0 606 304 42 48 chr2 89765960 89766318 -163490265 + MLT1K LTR MaLR 183 538 -50 656 243 96 55 chr2 89767533 89767751 -163488832 - MIR SINE MIR -7 255 29 1841 132 28 40 chr2 89767751 89768225 -163488358 - MER51A LTR ERV1 0 634 1 2295 116 36 28 chr2 89768237 89768598 -163487985 + THE1B LTR MaLR 1 364 0 1624 146 29 11 chr2 89768722 89768997 -163487586 + AluJo SINE Alu 1 280 -32 2013 189 72 107 chr2 89769147 89769269 -163487314 - MLT1E3 LTR MaLR -10 614 489 2789 138 39 30 chr2 89769269 89769439 -163487144 - LOR1a LTR ERV1 0 497 330 1985 137 0 0 chr2 89769439 89769760 -163486823 + AluSq SINE Alu 1 321 0 2789 138 39 30 chr2 89769760 89770079 -163486504 - LOR1a LTR ERV1 -167 330 3 2013 189 72 107 chr2 89770079 89770097 -163486486 - MLT1E3 LTR MaLR -135 489 472 1792 149 10 3 chr2 89770097 89770393 -163486190 + AluJb SINE Alu 1 298 -14 2013 189 72 107 chr2 89770393 89770887 -163485696 - MLT1E3 LTR MaLR -152 472 1 1024 309 120 35 chr2 89771030 89772372 -163484211 + L1MEd LINE L1 41 1555 -4755 838 214 35 83 chr2 89772372 89772651 -163483932 - Charlie8 DNA MER1_type -1022 1395 39 1561 247 53 30 chr2 89773712 89774181 -163482402 - L1ME3A LINE L1 -16 6154 5675 263 27 0 27 chr2 89774192 89774229 -163482354 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1900 82 4 0 chr2 89774231 89774474 -163482109 - AluSp SINE Alu -30 283 40 244 200 0 0 chr2 89774663 89774708 -163481875 - MIR3 SINE MIR -6 202 158 357 161 125 18 chr2 89774713 89774825 -163481758 + MER113 DNA MER1_type? 1 124 -397 1285 238 147 20 chr2 89774952 89775401 -163481182 + LTR33 LTR ERVL 1 506 -15 222 268 53 14 chr2 89775415 89775535 -163481048 - MIR SINE MIR -82 126 51 1134 126 0 0 chr2 89776176 89776343 -163480240 - AluSg/x SINE Alu -16 296 130 2288 114 0 3 chr2 89776356 89776655 -163479928 - AluSx SINE Alu -14 298 1 565 262 80 19 chr2 89777775 89777955 -163478628 + MIR3 SINE MIR 20 206 -21 1845 178 36 7 chr2 89778160 89778277 -163478306 + AluJo SINE Alu 1 113 -199 213 94 0 0 chr2 89778277 89778309 -163478274 + (CAAA)n Simple_repeat Simple_repeat 4 35 0 1845 178 36 7 chr2 89778309 89778494 -163478089 + AluJo SINE Alu 113 312 0 504 48 0 0 chr2 89779496 89779559 -163477024 + (TCCC)n Simple_repeat Simple_repeat 1 63 0 812 117 5 48 chr2 89779559 89779747 -163476836 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 2312 96 0 0 chr2 89779748 89780039 -163476544 - AluSx SINE Alu -21 291 1 692 287 46 27 chr2 89780207 89780535 -163476048 - HAL1 LINE L1 -1801 706 373 318 291 84 50 chr2 89780678 89780714 -163475869 - HAL1 LINE L1 -2194 313 280 1994 127 19 29 chr2 89780714 89781030 -163475553 - AluSq SINE Alu 0 313 1 318 291 84 50 chr2 89781030 89781172 -163475411 - HAL1 LINE L1 -2227 280 129 474 195 252 57 chr2 89781892 89782051 -163474532 - MER91B DNA MER1_type 0 190 1 1570 176 99 8 chr2 89782257 89782610 -163473973 - L1MC2 LINE L1 0 6344 5960 1766 172 14 3 chr2 89782910 89783201 -163473382 + AluJb SINE Alu 1 294 -18 2218 98 40 0 chr2 89783210 89783528 -163473055 + AluSq SINE Alu 1 313 0 2394 94 0 0 chr2 89783673 89783980 -163472603 + AluY SINE Alu 1 307 -4 353 204 129 0 chr2 89784155 89784248 -163472335 - MLT1I LTR MaLR -2 407 303 928 187 58 0 chr2 89784406 89784561 -163472022 - FAM SINE Alu -11 164 1 329 130 14 72 chr2 89784562 89784631 -163471952 + MER45 DNA AcHobo 1510 1574 -7 2524 70 0 0 chr2 89784861 89785161 -163471422 - AluY SINE Alu -11 300 1 510 155 62 21 chr2 89785161 89785258 -163471325 - FLAM_A SINE Alu -19 123 23 873 57 16 0 chr2 89785272 89785394 -163471189 - MER4C LTR ERV1 -339 126 3 1495 221 65 118 chr2 89785750 89786067 -163470516 + MER21B LTR ERV1 6 338 -525 2525 96 0 0 chr2 89786067 89786379 -163470204 + AluSx SINE Alu 1 312 0 1495 221 65 118 chr2 89786379 89786743 -163469840 + MER21B LTR ERV1 338 647 -216 2579 70 0 0 chr2 89786743 89787044 -163469539 - AluY SINE Alu -10 301 1 1495 221 65 118 chr2 89787044 89787109 -163469474 + MER21B LTR ERV1 647 714 -149 1105 261 135 36 chr2 89787500 89787527 -163469056 + LTR33 LTR ERVL 1 24 -497 2332 159 7 39 chr2 89787527 89787936 -163468647 - MSTD LTR MaLR 0 396 1 1105 261 135 36 chr2 89787936 89788376 -163468207 + LTR33 LTR ERVL 24 514 -7 430 307 40 7 chr2 89788704 89788854 -163467729 + MIR3 SINE MIR 16 170 -38 245 122 49 0 chr2 89788981 89789022 -163467561 + MIR3 SINE MIR 151 193 -15 661 304 107 13 chr2 89789440 89789664 -163466919 + MIR SINE MIR 5 249 -13 2242 132 0 3 chr2 89789765 89790076 -163466507 + AluSq SINE Alu 1 310 -3 226 313 0 15 chr2 89790178 89790245 -163466338 + L2 LINE L2 3248 3313 0 2376 91 3 0 chr2 89790490 89790798 -163465785 - AluY SINE Alu -2 309 1 28398 30 1 0 chr2 89790912 89795208 -163461375 + L1PA4 LINE L1 1858 6155 0 449 338 30 50 chr2 89795305 89795503 -163461080 - L1M4 LINE L1 -2535 3847 3654 339 115 19 0 chr2 89795506 89795558 -163461025 + MER31A LTR ERV1 354 406 -79 674 313 108 41 chr2 89795571 89796063 -163460520 - L1M4 LINE L1 -2719 3663 3139 2268 146 6 3 chr2 89796096 89796432 -163460151 + MER1B DNA MER1_type 1 337 0 450 94 0 0 chr2 89796469 89796533 -163460050 + (TA)n Simple_repeat Simple_repeat 2 65 0 1002 149 0 0 chr2 89796602 89796743 -163459840 - AluSp SINE Alu -172 141 1 456 364 24 21 chr2 89796748 89797122 -163459461 - L1M4 LINE L1 -3321 3061 2538 471 318 104 32 chr2 89797187 89797540 -163459043 - L1M4 LINE L1 -3840 2542 2171 1413 189 14 92 chr2 89797599 89797623 -163458960 + MER58B DNA MER1_type 11 35 -2385 2576 167 45 2 chr2 89797623 89798065 -163458518 + LOR1b LTR ERV1 1 461 0 1413 189 14 92 chr2 89798065 89798111 -163458472 + MER58B DNA MER1_type 35 83 -2337 1788 175 0 57 chr2 89798111 89798442 -163458141 - AluJb SINE Alu 0 312 1 1413 189 14 92 chr2 89798442 89798729 -163457854 + MER58B DNA MER1_type 83 341 0 1948 194 18 20 chr2 89798841 89799285 -163457298 + L1ME1 LINE L1 5720 6162 -4 489 265 18 12 chr2 89799333 89799499 -163457084 + L1ME2 LINE L1 5988 6154 -10 315 200 147 13 chr2 89800262 89800337 -163456246 - MIR SINE MIR -149 113 29 497 225 94 33 chr2 89800527 89800771 -163455812 + LTR16C LTR ERVL 224 482 -9 379 248 114 40 chr2 89800833 89800923 -163455660 - MER117 DNA MER1_type -31 166 84 228 67 0 0 chr2 89800923 89800953 -163455630 + (TA)n Simple_repeat Simple_repeat 2 31 0 2068 111 7 27 chr2 89800953 89801251 -163455332 - AluSq SINE Alu -21 292 1 379 248 114 40 chr2 89801251 89801308 -163455275 - MER117 DNA MER1_type -112 85 7 2340 178 53 17 chr2 89801925 89802419 -163454164 - L1MA8 LINE L1 0 6291 5775 2382 84 3 3 chr2 89802419 89802715 -163453868 + AluY SINE Alu 2 297 -14 2340 178 53 17 chr2 89802715 89802744 -163453839 - L1MA8 LINE L1 -516 5775 5749 2260 93 3 0 chr2 89803192 89803492 -163453091 - AluY SINE Alu -10 301 1 564 191 127 0 chr2 89803652 89803762 -163452821 - AluJb SINE Alu -69 243 120 194 264 56 14 chr2 89803894 89803966 -163452617 + MIR SINE MIR 117 191 -71 1710 111 4 0 chr2 89804140 89804365 -163452218 + AluSp SINE Alu 82 307 -6 2847 254 119 29 chr2 89804439 89805331 -163451252 - L2 LINE L2 0 3313 2503 2220 100 0 0 chr2 89805331 89805632 -163450951 + AluSx SINE Alu 1 301 0 2847 254 119 29 chr2 89805632 89805677 -163450906 - L2 LINE L2 -810 2503 2463 1685 164 49 3 chr2 89805677 89805964 -163450619 + AluJo SINE Alu 1 300 -12 2847 254 119 29 chr2 89805964 89806388 -163450195 - L2 LINE L2 -850 2463 1826 1743 196 0 7 chr2 89806490 89806796 -163449787 + AluJb SINE Alu 1 304 -8 1243 180 9 32 chr2 89806800 89807017 -163449566 + AluJb SINE Alu 85 296 -16 657 305 26 0 chr2 89807162 89807388 -163449195 - L2 LINE L2 -2240 1074 843 1375 77 0 0 chr2 89807394 89807564 -163449019 + AluY SINE Alu 136 305 -6 1054 239 91 44 chr2 89807581 89807821 -163448762 - L2 LINE L2 -2483 831 563 2459 70 7 0 chr2 89807821 89808119 -163448464 + AluSq SINE Alu 1 300 -13 1054 239 91 44 chr2 89808119 89808284 -163448299 - L2 LINE L2 -2751 563 407 342 180 0 0 chr2 89808284 89808345 -163448238 - FRAM/FAM SINE Alu -93 82 22 469 239 17 4 chr2 89808804 89809036 -163447547 + GA-rich Low_complexity Low_complexity 1 235 0 2452 97 0 0 chr2 89809668 89809977 -163446606 + AluSg SINE Alu 1 309 -1 2084 117 0 44 chr2 89810570 89810887 -163445696 - AluSx SINE Alu -9 303 1 1609 264 52 15 chr2 89812276 89812753 -163443830 - MER45C DNA AcHobo 0 953 459 1800 179 0 0 chr2 89812878 89813169 -163443414 - AluJo SINE Alu -20 292 2 640 217 133 53 chr2 89813465 89813556 -163443027 + MER45C DNA AcHobo 1 83 -870 2085 133 3 0 chr2 89813556 89813849 -163442734 - AluSq SINE Alu -19 294 1 640 217 133 53 chr2 89813849 89813983 -163442600 + MER45C DNA AcHobo 83 244 -709 2168 120 13 0 chr2 89814188 89814487 -163442096 + AluSx SINE Alu 9 311 -1 2361 113 0 6 chr2 89815253 89815564 -163441019 - AluSx SINE Alu -3 309 1 2404 100 0 0 chr2 89815818 89816117 -163440466 + AluSq SINE Alu 1 299 -14 542 180 0 8 chr2 89816715 89816837 -163439746 + L1MA5A LINE L1 6176 6296 -1 212 229 21 0 chr2 89816840 89816888 -163439695 + (TA)n Simple_repeat Simple_repeat 1 49 0 2098 82 0 21 chr2 89816946 89817228 -163439355 + AluSc SINE Alu 34 309 0 2047 137 3 0 chr2 89817238 89817530 -163439053 + AluSx SINE Alu 1 293 -19 1085 114 0 0 chr2 89817967 89818107 -163438476 - AluJb SINE Alu -13 299 160 595 255 80 30 chr2 89818134 89818334 -163438249 + MER63A DNA MER1_type 1 210 0 186 314 139 0 chr2 89818576 89818662 -163437921 + MIR SINE MIR 47 144 -118 262 132 0 0 chr2 89818966 89819004 -163437579 - MIR SINE MIR -65 143 106 880 238 71 8 chr2 89819240 89819492 -163437091 - LTR16A LTR ERVL -13 437 170 374 181 21 146 chr2 89820864 89821008 -163435575 - MIR3 SINE MIR -5 203 78 377 316 147 26 chr2 89821364 89821554 -163435029 + MIR SINE MIR 21 233 -29 1138 244 49 102 chr2 89823072 89823410 -163433173 + LTR33 LTR ERVL 3 302 -219 2051 116 14 0 chr2 89823410 89823686 -163432897 - AluSx SINE Alu 0 312 33 1138 244 49 102 chr2 89823686 89823895 -163432688 + LTR33 LTR ERVL 302 521 0 294 29 0 0 chr2 89825262 89825297 -163431286 + (CA)n Simple_repeat Simple_repeat 2 36 0 237 347 20 10 chr2 89825455 89825553 -163431030 + L3 LINE CR1 214 312 -1265 228 364 63 28 chr2 89825584 89825727 -163430856 + L3 LINE CR1 295 442 -1135 446 275 22 14 chr2 89825777 89825915 -163430668 + MLT1I LTR MaLR 1 139 -270 2111 109 11 0 chr2 89827072 89827357 -163429226 + AluSx SINE Alu 1 288 -24 912 254 47 21 chr2 89827587 89827866 -163428717 + MLT1J LTR MaLR 36 321 -190 501 270 20 39 chr2 89828129 89828333 -163428250 - L2 LINE L2 -2 3311 3112 961 89 0 0 chr2 89828338 89828462 -163428121 + AluSg/x SINE Alu 176 299 -13 256 331 119 44 chr2 89828526 89828745 -163427838 - L2 LINE L2 -248 3024 2790 1222 175 9 0 chr2 89828745 89828962 -163427621 + MLT1E1 LTR MaLR 1 219 -435 2260 114 7 0 chr2 89828962 89829259 -163427324 - AluSq SINE Alu -14 299 1 577 129 0 0 chr2 89829326 89829494 -163427089 + L1MB3 LINE L1 5881 6176 -7 1407 230 132 0 chr2 89829495 89829852 -163426731 + MLT1E1 LTR MaLR 251 654 0 5840 130 9 33 chr2 89829879 89831297 -163425286 + L1MA8 LINE L1 4410 5770 -521 1989 157 7 0 chr2 89831297 89831596 -163424987 + AluJb SINE Alu 3 303 -9 5840 130 9 33 chr2 89831596 89832107 -163424476 + L1MA8 LINE L1 5770 6291 0 1970 152 0 26 chr2 89832150 89832453 -163424130 - AluJo SINE Alu -17 295 1 434 345 117 13 chr2 89832503 89832819 -163423764 - L2 LINE L2 -534 2780 2432 2100 87 3 68 chr2 89832914 89833235 -163423348 + AluSc SINE Alu 1 300 -9 2438 87 3 0 chr2 89833237 89833536 -163423047 + AluSc SINE Alu 1 300 -9 226 246 42 59 chr2 89833536 89833654 -163422929 - MLT1L LTR MaLR -14 601 486 2133 116 3 7 chr2 89834309 89834602 -163421981 + AluY SINE Alu 1 292 -19 1352 167 4 4 chr2 89836187 89836444 -163420139 - L1MB3 LINE L1 -1 6182 5926 996 197 53 40 chr2 89836950 89837395 -163419188 + MLT1B LTR MaLR 5 390 0 237 354 34 28 chr2 89837418 89837596 -163418987 - L2 LINE L2 -373 2941 2763 358 169 16 34 chr2 89837911 89838022 -163418561 - MLT1H LTR MaLR -376 173 40 357 248 47 27 chr2 89838193 89838342 -163418241 - MLT1J LTR MaLR -355 156 5 391 223 21 0 chr2 89838444 89838538 -163418045 - MER5A DNA MER1_type -85 104 9 639 265 94 0 chr2 89838544 89838725 -163417858 - MLT1I LTR MaLR -14 395 198 245 312 28 46 chr2 89838838 89838947 -163417636 - L2 LINE L2 -224 3048 2942 339 285 140 42 chr2 89838948 89839141 -163417442 - MIR SINE MIR -3 259 48 2920 153 18 18 chr2 89839302 89839865 -163416718 - L1MB3 LINE L1 -1 6182 5620 2290 106 3 0 chr2 89839873 89840174 -163416409 - AluSg SINE Alu -7 303 2 251 287 23 58 chr2 89840456 89840543 -163416040 + MIR SINE MIR 124 207 -55 437 261 46 0 chr2 89840770 89840900 -163415683 - MER5A DNA MER1_type -4 185 50 2140 114 3 26 chr2 89840928 89841235 -163415348 - AluSx SINE Alu -12 300 1 307 221 15 0 chr2 89841235 89841303 -163415280 - MER5A DNA MER1_type -120 69 1 184 301 82 0 chr2 89842132 89842205 -163414378 + MIR SINE MIR 120 198 -64 398 302 104 52 chr2 89842604 89842815 -163413768 + MIR SINE MIR 4 238 -24 2176 130 0 3 chr2 89843010 89843303 -163413280 - AluSx SINE Alu -20 292 1 508 103 0 0 chr2 89843336 89843448 -163413135 + AluSg/x SINE Alu 214 325 0 510 251 61 36 chr2 89843566 89843783 -163412800 + L1MC/D LINE L1 5215 5441 -787 1927 147 23 7 chr2 89843783 89844083 -163412500 + AluJb SINE Alu 1 305 -7 510 251 61 36 chr2 89844083 89844123 -163412460 + L1MC/D LINE L1 5441 5479 -749 1097 137 73 5 chr2 89844175 89844379 -163412204 - MER20 DNA MER1_type 0 219 2 185 216 0 59 chr2 89844418 89844469 -163412114 - MIR SINE MIR -101 161 114 395 234 131 0 chr2 89846000 89846107 -163410476 + MER5B DNA MER1_type 3 123 -55 1767 171 32 4 chr2 89846108 89846389 -163410194 - AluJo SINE Alu -23 289 1 929 110 39 0 chr2 89846399 89846526 -163410057 - AluSg/x SINE Alu -16 294 163 216 211 70 18 chr2 89846555 89846612 -163409971 - MER5B DNA MER1_type -117 61 2 3009 157 69 9 chr2 89847039 89847257 -163409326 + L1MB3 LINE L1 5429 5633 -550 2343 90 13 0 chr2 89847257 89847556 -163409027 - AluSx SINE Alu -9 303 1 3009 157 69 9 chr2 89847556 89847905 -163408678 + L1MB3 LINE L1 5633 6030 -153 668 165 47 0 chr2 89848121 89848248 -163408335 + FLAM_C SINE Alu 1 133 0 2268 92 7 3 chr2 89848364 89848656 -163407927 + AluSq SINE Alu 1 293 -20 2406 81 0 13 chr2 89853100 89853408 -163403175 - AluY SINE Alu -7 304 1 227 250 0 0 chr2 89855072 89855128 -163401455 + CT-rich Low_complexity Low_complexity 2 57 0 246 105 0 0 chr2 89855946 89855984 -163400599 + (TCCA)n Simple_repeat Simple_repeat 4 41 0 280 239 43 0 chr2 89858197 89858289 -163398294 - L2 LINE L2 -25 3288 3193 2140 115 7 0 chr2 89858398 89858676 -163397907 - AluSx SINE Alu -30 282 3 320 281 52 39 chr2 89859184 89859337 -163397246 + L2 LINE L2 2925 3079 -193 290 282 35 0 chr2 89859970 89860055 -163396528 + GA-rich Low_complexity Low_complexity 2 89 0 279 310 17 35 chr2 89861162 89861278 -163395305 + Charlie8 DNA MER1_type 17 130 -2287 216 308 56 49 chr2 89863348 89863491 -163393092 - MIR SINE MIR -53 155 12 564 96 0 58 chr2 89864655 89864811 -163391772 + (TG)n Simple_repeat Simple_repeat 2 148 0 222 62 0 0 chr2 89864889 89864921 -163391662 + (TG)n Simple_repeat Simple_repeat 2 33 0 218 331 99 0 chr2 89864954 89865096 -163391487 - MIR3 SINE MIR -22 186 31 420 258 40 0 chr2 89865832 89865956 -163390627 + MER94 DNA DNA 2 130 -4 413 301 46 0 chr2 89865983 89866156 -163390427 + LTR33 LTR ERVL 40 220 -301 246 32 0 0 chr2 89866701 89866732 -163389851 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 242 282 179 0 chr2 89867072 89867150 -163389433 + MIR SINE MIR 61 152 -56 405 315 112 10 chr2 89867222 89867419 -163389164 + MIR SINE MIR 46 262 0 1988 107 0 8 chr2 89868377 89868630 -163387953 + AluSq SINE Alu 32 282 -31 270 0 0 0 chr2 89868638 89868668 -163387915 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 509 333 38 17 chr2 89869347 89869584 -163386999 + MIR SINE MIR 20 261 -1 397 319 30 0 chr2 89869967 89870102 -163386481 + MIR SINE MIR 33 171 -91 2124 97 0 88 chr2 89870111 89870441 -163386142 + AluSx SINE Alu 1 301 -11 724 160 29 92 chr2 89870479 89870540 -163386043 - L1MB7 LINE L1 0 6184 6121 1790 177 0 14 chr2 89870540 89870834 -163385749 - AluJb SINE Alu -22 290 1 724 160 29 92 chr2 89870834 89870978 -163385605 - L1MB7 LINE L1 -63 6121 5992 818 268 46 46 chr2 89871260 89871399 -163385184 - MLT1J LTR MaLR -203 308 170 2171 131 0 10 chr2 89871399 89871697 -163384886 - AluSx SINE Alu -17 295 1 818 268 46 46 chr2 89871697 89871841 -163384742 - MLT1J LTR MaLR -340 171 25 372 259 12 0 chr2 89872512 89872597 -163383986 + LTR25 LTR ERV1 248 333 -461 822 198 17 6 chr2 89872796 89872989 -163383594 + LTR25 LTR ERV1 364 792 -2 1887 160 0 26 chr2 89873503 89873810 -163382773 - AluJb SINE Alu -13 299 1 2354 87 0 3 chr2 89873859 89874158 -163382425 - AluSc SINE Alu -11 298 1 2568 175 39 31 chr2 89874164 89874736 -163381847 + L1ME2 LINE L1 5587 6162 -2 2561 74 0 3 chr2 89874930 89875239 -163381344 + AluSc SINE Alu 1 308 -1 349 242 43 19 chr2 89876015 89876176 -163380407 + (CA)n Simple_repeat Simple_repeat 2 166 0 204 67 0 0 chr2 89876230 89876260 -163380323 + (CA)n Simple_repeat Simple_repeat 1 30 0 288 289 22 116 chr2 89876932 89877063 -163379520 - L2 LINE L2 -182 3090 2997 1942 125 10 10 chr2 89877063 89877351 -163379232 + AluSp SINE Alu 26 313 0 288 289 22 116 chr2 89877351 89877496 -163379087 - L2 LINE L2 -275 2997 2840 370 333 162 9 chr2 89877564 89877774 -163378809 + MIR SINE MIR 21 262 0 295 278 13 106 chr2 89879020 89879171 -163377412 + MIR SINE MIR 64 200 -62 859 118 0 0 chr2 89879171 89879290 -163377293 + AluSx SINE Alu 42 160 -152 5030 98 19 0 chr2 89879290 89879965 -163376618 - LTR12 LTR ERV1 0 688 1 789 205 45 60 chr2 89880095 89880295 -163376288 - pTR5 LTR ERV1 -1497 941 745 1093 92 13 0 chr2 89880295 89880448 -163376135 + AluSx SINE Alu 153 307 -3 249 324 99 7 chr2 89880666 89880808 -163375775 + L2 LINE L2 3149 3303 -10 645 269 23 0 chr2 89881800 89881971 -163374612 + L1ME4a LINE L1 5453 5627 -2181 1887 180 9 23 chr2 89882018 89882107 -163374476 - MER2 DNA MER2_type 0 345 256 1793 114 10 41 chr2 89882107 89882428 -163374155 + AluSc SINE Alu 1 312 0 1887 180 9 23 chr2 89882428 89882682 -163373901 - MER2 DNA MER2_type -89 256 6 260 246 246 0 chr2 89882965 89883083 -163373500 + L1ME4a LINE L1 5971 6117 -4 5108 149 37 42 chr2 89883117 89883316 -163373267 - L1MC3 LINE L1 0 7785 7587 1675 153 32 0 chr2 89883316 89883597 -163372986 - AluJb SINE Alu -22 290 1 5108 149 37 42 chr2 89883597 89883753 -163372830 - L1MC3 LINE L1 -198 7587 7432 2157 120 3 0 chr2 89883753 89884062 -163372521 - AluSx SINE Alu -2 310 1 5108 149 37 42 chr2 89884062 89884633 -163371950 - L1MC3 LINE L1 -353 7432 6861 288 0 0 0 chr2 89884633 89884665 -163371918 + (TG)n Simple_repeat Simple_repeat 2 33 0 5108 149 37 42 chr2 89884665 89884760 -163371823 - L1MC3 LINE L1 -924 6861 6767 1333 133 19 51 chr2 89884821 89885077 -163371506 + AluJb SINE Alu 54 301 -11 1298 152 74 35 chr2 89885077 89885360 -163371223 + LTR64 LTR ERVK 28 321 -237 1676 184 129 105 chr2 89885368 89885997 -163370586 + LTR49-int LTR ERV1 2704 3316 -2922 1897 136 30 7 chr2 89885997 89886298 -163370285 - AluSx SINE Alu -4 308 1 1676 184 129 105 chr2 89886298 89886673 -163369910 + LTR49-int LTR ERV1 3316 4964 -1274 775 157 148 16 chr2 89886850 89887105 -163369478 + LTR64 LTR ERVK 220 550 -8 413 182 78 0 chr2 89887133 89887210 -163369373 - L1MC3 LINE L1 -1007 6778 6696 493 134 0 5 chr2 89887938 89888070 -163368513 + MER53 DNA DNA 1 188 -1 2018 123 0 35 chr2 89888671 89888987 -163367596 + AluSx SINE Alu 1 305 -7 1196 153 22 45 chr2 89889907 89890130 -163366453 - MER20 DNA MER1_type -1 218 1 3694 168 22 4 chr2 89890245 89890994 -163365589 + L1M4 LINE L1 4666 5431 -743 732 244 143 10 chr2 89891049 89891356 -163365227 + L1ME LINE L1 4886 5233 -913 500 291 128 31 chr2 89891553 89891827 -163364756 + LTR16A LTR ERVL 103 448 -9 25 0 0 0 chr2 89891838 89891863 -163364720 + AT_rich Low_complexity Low_complexity 1 25 0 374 240 16 23 chr2 89891877 89892006 -163364577 + L1ME LINE L1 5262 5389 -775 1067 261 26 10 chr2 89892012 89892318 -163364265 - MLT1C LTR MaLR 0 467 157 2596 117 11 0 chr2 89892348 89892708 -163363875 - THE1B LTR MaLR 0 364 1 11042 107 38 1 chr2 89892713 89894231 -163362352 - THE1B-int LTR MaLR -6 1574 1 2561 112 17 0 chr2 89894231 89894589 -163361994 - THE1B LTR MaLR 0 364 1 721 207 47 7 chr2 89894606 89894756 -163361827 - MLT1C LTR MaLR -349 156 1 750 230 139 48 chr2 89894762 89894992 -163361591 + L1ME LINE L1 5400 5650 -520 1923 291 18 14 chr2 89894993 89895554 -163361029 + MLT1G LTR MaLR 28 590 0 621 191 38 32 chr2 89895554 89895711 -163360872 + L1ME LINE L1 5646 5803 -367 1212 241 107 42 chr2 89896319 89896407 -163360176 + MLT1J LTR MaLR 1 82 -429 2730 151 16 0 chr2 89896407 89896832 -163359751 - MSTB1 LTR MaLR 0 432 1 1212 241 107 42 chr2 89896832 89897220 -163359363 + MLT1J LTR MaLR 82 508 -3 543 312 87 18 chr2 89897222 89897282 -163359301 + L1MEc LINE L1 1333 1387 -1189 2012 123 0 28 chr2 89897282 89897599 -163358984 + AluSx SINE Alu 1 308 -4 543 312 87 18 chr2 89897599 89897929 -163358654 + L1MEc LINE L1 1387 1715 -861 1733 264 54 2 chr2 89898136 89898601 -163357982 + LTR16C LTR ERVL 3 491 0 848 260 115 37 chr2 89898621 89899325 -163357258 + L1MEc LINE L1 2216 2974 -3241 316 264 16 62 chr2 89899491 89899620 -163356963 - MLT1K LTR MaLR -340 248 126 659 308 110 54 chr2 89900518 89900927 -163355656 - MLT1K LTR MaLR -61 527 96 330 241 38 0 chr2 89902152 89902231 -163354352 - MIR SINE MIR -95 167 86 860 256 135 0 chr2 89902319 89902534 -163354049 + MIR SINE MIR 2 245 -17 209 320 57 52 chr2 89902625 89902819 -163353764 - L2 LINE L2 -93 3179 2985 254 214 0 57 chr2 89903586 89903656 -163352927 - MER103 DNA DNA -55 111 46 244 264 42 0 chr2 89903669 89903741 -163352842 + GA-rich Low_complexity Low_complexity 4 78 0 2060 119 3 0 chr2 89904801 89905095 -163351488 + AluSq SINE Alu 5 299 -14 218 251 52 0 chr2 89905186 89905252 -163351331 - MIR SINE MIR -66 142 82 377 321 43 7 chr2 89905965 89906105 -163350478 - MIR SINE MIR -50 212 68 2159 118 0 3 chr2 89906469 89906775 -163349808 - AluSx SINE Alu -7 305 1 472 293 5 86 chr2 89906801 89906999 -163349584 + MLT1K LTR MaLR 34 215 -373 461 291 53 15 chr2 89907095 89907301 -163349282 - L1ME LINE L1 -459 5662 5449 339 269 13 0 chr2 89908607 89908685 -163347898 - MIR SINE MIR -106 156 78 1766 137 3 40 chr2 89908685 89908985 -163347598 - AluJo SINE Alu -13 299 11 999 101 0 0 chr2 89909021 89909160 -163347423 + AluSg SINE Alu 1 139 -171 229 136 23 0 chr2 89909163 89909207 -163347376 + Alu SINE Alu 255 299 -1 339 217 132 9 chr2 89909337 89909443 -163347140 + MLT1J1 LTR MaLR 6 124 -322 337 249 98 61 chr2 89909413 89909643 -163346940 + MLT1J2 LTR MaLR 137 450 0 * 2040 137 17 4 chr2 89909726 89910207 -163346376 + MER6A DNA MER2_type 1 557 -48 189 257 0 0 chr2 89910785 89910820 -163345763 - MIR SINE MIR -7 255 221 299 310 106 50 chr2 89910978 89911250 -163345333 - L1M4 LINE L1 -1659 4487 4232 600 109 23 55 chr2 89911250 89911286 -163345297 - L1MB8 LINE L1 0 6178 6142 8933 188 32 26 chr2 89911286 89913030 -163343553 - MER52A LTR ERV1 0 1755 1 600 109 23 55 chr2 89913030 89913121 -163343462 - L1MB8 LINE L1 -36 6142 6055 299 310 106 50 chr2 89913121 89913564 -163343019 - L1M4 LINE L1 -1914 4232 3722 186 43 0 0 chr2 89913564 89913587 -163342996 + (TTA)n Simple_repeat Simple_repeat 2 24 0 299 310 106 50 chr2 89913587 89913651 -163342932 - L1M4 LINE L1 -2424 3722 3663 230 180 40 0 chr2 89913652 89913702 -163342881 + CT-rich Low_complexity Low_complexity 1 52 0 1566 157 14 24 chr2 89913702 89913996 -163342587 - AluJo SINE Alu -21 291 1 198 103 0 0 chr2 89914001 89914030 -163342553 + (TTC)n Simple_repeat Simple_repeat 2 30 0 2038 119 0 10 chr2 89914154 89914456 -163342127 - AluSx SINE Alu -10 302 4 13463 63 1 3 chr2 89914648 89916305 -163340278 + L1P LINE L1 5 1657 -4489 715 183 0 0 chr2 89917875 89917990 -163338593 + FLAM_C SINE Alu 1 115 -18 215 30 0 30 chr2 89918002 89918035 -163338548 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 1999 109 48 0 chr2 89918291 89918585 -163337998 + AluSc SINE Alu 1 308 -1 489 295 36 0 chr2 89920063 89920256 -163336327 - MIR SINE MIR -36 226 27 449 240 178 0 chr2 89921157 89921286 -163335297 - MIR SINE MIR -110 152 1 2207 95 0 3 chr2 89921637 89921941 -163334642 - AluSc SINE Alu -6 303 1 403 281 106 49 chr2 89922696 89923148 -163333435 + L1ME4a LINE L1 5643 6120 -1 1972 108 0 0 chr2 89923700 89923969 -163332614 - AluSx SINE Alu -43 269 1 30 0 0 0 chr2 89924893 89924923 -163331660 + AT_rich Low_complexity Low_complexity 1 30 0 2010 118 0 3 chr2 89926743 89927030 -163329553 + AluSc SINE Alu 5 290 -19 1983 209 35 11 chr2 89927424 89927888 -163328695 + L1MB7 LINE L1 3901 4375 -1771 2397 102 0 0 chr2 89927894 89928198 -163328385 + AluSx SINE Alu 1 304 -8 5361 92 40 9 chr2 89928212 89929005 -163327578 + Tigger1 DNA MER2_type 922 1739 -679 2872 187 48 25 chr2 89929008 89929660 -163326923 + L1MB7 LINE L1 5468 6134 -50 1038 157 124 46 chr2 89929677 89929796 -163326787 - AluJo SINE Alu -30 282 174 299 25 25 0 chr2 89929796 89929836 -163326747 + (CTACT)n Simple_repeat Simple_repeat 1 41 0 2227 108 0 0 chr2 89929837 89930123 -163326460 - AluSg SINE Alu -24 286 1 1038 157 124 46 chr2 89930123 89930218 -163326365 - AluJo SINE Alu -137 175 49 279 181 18 15 chr2 89930480 89930559 -163326024 + L1MC4a LINE L1 5585 5650 -471 750 153 0 0 chr2 89930560 89930678 -163325905 + AluJb SINE Alu 2 119 -193 207 0 0 0 chr2 89930678 89930701 -163325882 + (TAA)n Simple_repeat Simple_repeat 2 24 0 506 295 10 32 chr2 89930724 89930944 -163325639 + L1MC4a LINE L1 5677 5897 -267 2068 160 0 0 chr2 89931283 89931590 -163324993 - AluSx SINE Alu -5 307 1 2125 238 119 56 chr2 89931721 89932889 -163323694 + L1ME3A LINE L1 4266 5621 -549 1859 135 0 0 chr2 89932889 89933148 -163323435 + AluSx SINE Alu 1 259 -53 2125 238 119 56 chr2 89933148 89933687 -163322896 + L1ME3A LINE L1 5621 6125 -45 3605 207 49 43 chr2 89934072 89934778 -163321805 + L1M4 LINE L1 2779 3494 -2652 2485 93 3 0 chr2 89934778 89935090 -163321493 + AluSp SINE Alu 1 313 0 3605 207 49 43 chr2 89935090 89935432 -163321151 + L1M4 LINE L1 3494 3833 -2313 991 206 82 17 chr2 89935505 89935796 -163320787 - L1M4 LINE L1 -3080 3066 2757 299 300 0 0 chr2 89936262 89936352 -163320231 + MIR SINE MIR 125 214 -48 1915 110 13 75 chr2 89936481 89936799 -163319784 - AluSx SINE Alu -14 298 1 361 290 174 13 chr2 89937617 89937927 -163318656 - L2 LINE L2 -2 3311 2952 341 287 114 12 chr2 89940735 89940902 -163315681 + MIR SINE MIR 67 250 -12 322 286 137 25 chr2 89942659 89942820 -163313763 + L1PA8A LINE L1 5651 5828 -303 318 50 0 0 chr2 89942946 89942986 -163313597 + (TG)n Simple_repeat Simple_repeat 2 41 0 882 215 6 0 chr2 89943027 89943185 -163313398 - AluJb SINE Alu -23 289 131 285 208 69 40 chr2 89943290 89943391 -163313192 - L1ME4a LINE L1 -27 6094 5991 1839 152 47 0 chr2 89944655 89944952 -163311631 + AluJb SINE Alu 1 311 -1 802 214 88 22 chr2 89944966 89945148 -163311435 + MER58A DNA MER1_type 4 197 -27 310 317 32 0 chr2 89946227 89946350 -163310233 - MER117 DNA MER1_type -59 138 12 582 229 84 0 chr2 89946391 89946557 -163310026 - MER5A DNA MER1_type -1 188 9 2453 75 3 0 chr2 89947237 89947532 -163309051 - AluSp SINE Alu -17 296 1 442 209 101 0 chr2 89947655 89947784 -163308799 - MER117 DNA MER1_type -39 158 17 349 273 50 0 chr2 89947863 89947984 -163308599 - MER103 DNA DNA 0 166 40 199 273 62 39 chr2 89948082 89948210 -163308373 + L2 LINE L2 3127 3257 -56 426 85 0 0 chr2 89949524 89949583 -163307000 + (CA)n Simple_repeat Simple_repeat 1 59 0 197 139 23 23 chr2 89951087 89951130 -163305453 + L2 LINE L2 3231 3273 -40 1946 148 3 7 chr2 89951282 89951586 -163304997 - AluJb SINE Alu -9 303 1 206 233 14 41 chr2 89951957 89952030 -163304553 + L2 LINE L2 3193 3263 -9 2113 143 0 0 chr2 89952838 89953138 -163303445 + AluSx SINE Alu 1 300 -12 1789 164 0 17 chr2 89953562 89953860 -163302723 - AluJb SINE Alu -19 293 1 22 56 0 0 chr2 89954073 89954109 -163302474 + AT_rich Low_complexity Low_complexity 1 36 0 715 298 96 10 chr2 89955057 89955480 -163301103 - L1ME4a LINE L1 -3 6118 5659 1838 108 19 0 chr2 89955746 89956004 -163300579 + AluSx SINE Alu 34 296 -16 885 145 0 0 chr2 89956016 89956174 -163300409 + AluSg/x SINE Alu 158 315 0 194 324 135 0 chr2 89956247 89956321 -163300262 + L2 LINE L2 3169 3252 -20 969 92 8 0 chr2 89956384 89956515 -163300068 - AluSg/x SINE Alu -4 308 177 2365 92 0 0 chr2 89956690 89956985 -163299598 - AluY SINE Alu -16 295 1 282 229 43 0 chr2 89957027 89957097 -163299486 - L1ME4a LINE L1 -460 5661 5589 2207 77 0 83 chr2 89957784 89958110 -163298473 - AluSq SINE Alu -14 299 1 1113 204 30 11 chr2 89958686 89958960 -163297623 + L1MD3 LINE L1 7610 7981 -14 271 244 11 44 chr2 89958964 89959054 -163297529 + MER103 DNA DNA 36 122 -44 2207 124 0 0 chr2 89959268 89959567 -163297016 - AluSx SINE Alu -13 299 1 191 370 0 0 chr2 89959615 89959696 -163296887 - MIR SINE MIR -3 259 179 287 294 92 25 chr2 89960750 89960913 -163295670 + MIR SINE MIR 86 259 -3 440 207 63 0 chr2 89961007 89961118 -163295465 + MER5B DNA MER1_type 2 119 -59 1871 135 30 7 chr2 89961836 89962133 -163294450 + AluSx SINE Alu 1 304 -8 881 148 23 51 chr2 89962526 89962702 -163293881 + FAM SINE Alu 1 171 -4 320 283 51 29 chr2 89962850 89962988 -163293595 + L1MEd LINE L1 531 671 -5448 742 180 0 43 chr2 89963005 89963144 -163293439 - AluJo SINE Alu -178 134 2 283 290 11 0 chr2 89963338 89963431 -163293152 + L1 LINE L1 3326 3419 -2727 2170 104 0 7 chr2 89963556 89963872 -163292711 + AluSx SINE Alu 1 314 0 2225 131 0 0 chr2 89964267 89964565 -163292018 + AluSx SINE Alu 1 298 -14 1089 280 75 5 chr2 89964572 89964983 -163291600 + L1 LINE L1 3629 4068 -2078 1626 239 107 57 chr2 89965060 89965270 -163291313 - L1MC4 LINE L1 -143 7899 7701 1811 164 3 7 chr2 89965270 89965557 -163291026 + AluSx SINE Alu 1 286 -26 1626 239 107 57 chr2 89965557 89965982 -163290601 - L1MC4 LINE L1 -341 7701 7232 1637 183 102 19 chr2 89965984 89966495 -163290088 - L1MC4 LINE L1 -941 7085 6452 371 233 237 4 chr2 89967018 89967250 -163289333 + L1 LINE L1 4075 4360 -1786 6747 145 39 21 chr2 89967361 89967447 -163289136 + L1MA5A LINE L1 4132 4215 -2082 2462 79 0 3 chr2 89967447 89967752 -163288831 - AluY SINE Alu -7 304 1 6747 145 39 21 chr2 89967752 89969761 -163286822 + L1MA5A LINE L1 4215 6297 0 583 281 61 55 chr2 89969781 89970091 -163286492 + L1MC4 LINE L1 7364 7675 -367 1989 110 6 72 chr2 89970778 89971097 -163285486 + AluSx SINE Alu 1 298 -14 242 327 87 0 chr2 89972004 89972108 -163284475 + L2 LINE L2 3160 3272 0 1814 161 7 26 chr2 89972260 89972565 -163284018 - AluJb SINE Alu -13 299 1 260 319 55 49 chr2 89972568 89972731 -163283852 - MIR SINE MIR -71 191 28 4688 166 56 9 chr2 89973357 89974324 -163282259 - L1MB3 LINE L1 0 6183 5174 860 258 180 9 chr2 89974703 89975188 -163281395 - L2 LINE L2 0 3313 2743 181 321 19 9 chr2 89975625 89975731 -163280852 - L2 LINE L2 -300 2972 2866 284 344 97 32 chr2 89976081 89976392 -163280191 - L2 LINE L2 -340 2974 2644 2588 47 0 3 chr2 89976628 89976927 -163279656 - AluSc SINE Alu -11 298 1 283 333 147 4 chr2 89976958 89977189 -163279394 - L2 LINE L2 -956 2358 2095 306 268 0 0 chr2 89977196 89977267 -163279316 + L2 LINE L2 3189 3259 -13 196 277 0 0 chr2 89978781 89978828 -163277755 - L2 LINE L2 -95 3218 3172 1084 168 0 0 chr2 89980158 89980325 -163276258 + FRAM SINE Alu 1 165 -11 21 57 0 0 chr2 89980584 89980619 -163275964 + AT_rich Low_complexity Low_complexity 1 35 0 2508 41 0 7 chr2 89981305 89981600 -163274983 + AluY SINE Alu 2 294 -17 272 269 64 0 chr2 89981773 89981851 -163274732 + L1ME LINE L1 5532 5614 -2194 226 252 108 27 chr2 89981932 89982043 -163274540 + L1ME LINE L1 5730 5849 -317 181 376 8 43 chr2 89982784 89982901 -163273682 - MER5A DNA MER1_type -1 188 76 2506 58 0 0 chr2 89983487 89983781 -163272802 + AluY SINE Alu 1 294 -17 617 234 0 0 chr2 89983792 89983903 -163272680 + FLAM_C SINE Alu 1 111 -32 2347 91 3 3 chr2 89983911 89984219 -163272364 - AluSp SINE Alu 0 313 6 2362 89 0 6 chr2 89984223 89984536 -163272047 - AluY SINE Alu 0 311 1 30 21 0 21 chr2 89984536 89984567 -163272016 + AT_rich Low_complexity Low_complexity 1 32 -15 1756 142 16 57 chr2 89984567 89984885 -163271698 + AluSx SINE Alu 1 305 -7 30 21 0 21 chr2 89984885 89984901 -163271682 + AT_rich Low_complexity Low_complexity 32 47 0 537 279 64 43 chr2 89985146 89985379 -163271204 + MIR SINE MIR 12 249 -13 1599 149 44 25 chr2 89985704 89985979 -163270604 + AluJb SINE Alu 1 280 -32 23 0 0 0 chr2 89985994 89986017 -163270566 + AT_rich Low_complexity Low_complexity 1 23 0 214 210 173 49 chr2 89986302 89986383 -163270200 - L2 LINE L2 0 3313 3223 1760 65 4 22 chr2 89986454 89986686 -163269897 - AluY SINE Alu -1 310 83 528 220 99 7 chr2 89986746 89986887 -163269696 + L2 LINE L2 2305 2458 -856 2543 168 34 19 chr2 89986947 89987423 -163269160 - MER68 LTR ERV1 -77 485 3 321 282 202 43 chr2 89987451 89987639 -163268944 + L2 LINE L2 2567 2784 -530 1143 224 9 13 chr2 89988434 89988666 -163267917 + AluJo SINE Alu 1 231 -81 1489 181 10 45 chr2 89989624 89989933 -163266650 - AluJo SINE Alu -6 306 9 2261 109 0 0 chr2 89989951 89990255 -163266328 - AluSg SINE Alu -6 304 1 268 266 25 13 chr2 89990456 89990535 -163266048 - L2 LINE L2 -33 3239 3160 425 267 61 38 chr2 89990719 89990850 -163265733 + L2 LINE L2 3139 3272 0 2292 86 3 3 chr2 89991535 89991836 -163264747 - AluY SINE Alu -10 301 1 2021 149 10 0 chr2 89992793 89993082 -163263501 + AluJo SINE Alu 1 292 -20 249 197 66 16 chr2 89994302 89994363 -163262220 + L1ME LINE L1 5711 5774 -347 1241 174 64 64 chr2 89994610 89994892 -163261691 - AluJo SINE Alu -30 282 1 2284 99 0 10 chr2 89995159 89995462 -163261121 + AluY SINE Alu 2 301 -10 1577 140 0 0 chr2 89996523 89996744 -163259839 + AluSx SINE Alu 1 221 -91 380 309 133 11 chr2 89996939 89997120 -163259463 + MIR SINE MIR 53 255 -7 902 160 34 34 chr2 89997305 89997480 -163259103 - MER20 DNA MER1_type 0 219 45 237 308 39 26 chr2 89997497 89997575 -163259008 + L2 LINE L2 3186 3264 -49 2362 82 3 3 chr2 89998128 89998434 -163258149 + AluSx SINE Alu 1 306 -6 2180 107 7 7 chr2 89998735 89999033 -163257550 + AluSq SINE Alu 1 298 -15 722 226 7 0 chr2 90000340 90000477 -163256106 - AluJo SINE Alu -75 237 100 262 189 0 38 chr2 90000615 90000627 -163255956 + MER3 DNA MER1_type 38 47 -162 613 215 184 0 chr2 90000627 90000790 -163255793 - MER3 DNA MER1_type 0 209 17 1635 148 34 4 chr2 90001560 90001824 -163254759 + AluJo SINE Alu 13 284 -28 2166 96 3 3 chr2 90002200 90002493 -163254090 + AluSg SINE Alu 1 293 -17 27 0 0 0 chr2 90003016 90003043 -163253540 + AT_rich Low_complexity Low_complexity 1 27 0 1754 105 112 11 chr2 90003429 90003696 -163252887 - AluSg SINE Alu -16 294 1 505 78 0 0 chr2 90003931 90003995 -163252588 + MADE1 DNA Mariner 1 64 -16 349 83 0 0 chr2 90003999 90004047 -163252536 + MADE1 DNA Mariner 32 79 -1 21 36 0 0 chr2 90004301 90004329 -163252254 + AT_rich Low_complexity Low_complexity 1 28 0 369 139 12 93 chr2 90008340 90008426 -163248157 - Tigger4(Zombi) DNA MER2_type 0 2731 2653 1682 160 22 0 chr2 90011399 90011674 -163244909 + AluJb SINE Alu 1 281 -31 1495 176 35 7 chr2 90011706 90011995 -163244588 + AluJb SINE Alu 1 297 -15 230 242 97 0 chr2 90012677 90012739 -163243844 - MER112 DNA MER1_type -176 84 17 829 136 64 0 chr2 90012977 90013102 -163243481 + FLAM_C SINE Alu 1 133 0 2207 110 0 7 chr2 90014331 90014639 -163241944 + AluSg SINE Alu 1 306 -4 278 256 37 0 chr2 90015476 90015558 -163241025 - MER112 DNA MER1_type -4 256 172 2395 78 3 0 chr2 90015786 90016080 -163240503 - AluSp SINE Alu -18 295 1 2342 110 0 0 chr2 90017393 90017703 -163238880 + AluSx SINE Alu 1 310 -2 188 362 48 0 chr2 90017750 90017855 -163238728 - L3b LINE CR1 -104 1479 1370 301 28 0 0 chr2 90018089 90018125 -163238458 + MADE1 DNA Mariner 28 63 -17 2295 87 21 0 chr2 90018556 90018843 -163237740 - AluSc SINE Alu -16 293 1 2040 147 0 0 chr2 90018949 90019241 -163237342 - AluSx SINE Alu -20 292 1 204 311 101 34 chr2 90020172 90020291 -163236292 - MIR3 SINE MIR -79 129 3 308 349 101 0 chr2 90020375 90020504 -163236079 + MIR SINE MIR 45 186 -76 2351 91 0 13 chr2 90020507 90020814 -163235769 + AluY SINE Alu 1 303 -8 377 253 19 95 chr2 90021035 90021193 -163235390 - L2 LINE L2 0 3313 3168 317 292 231 29 chr2 90021339 90021707 -163234876 - L2 LINE L2 -201 3071 2639 325 101 0 0 chr2 90021709 90021756 -163234827 + Alu SINE Alu 1 42 -260 2074 150 0 6 chr2 90021776 90022089 -163234494 + AluSx SINE Alu 1 311 -1 1034 293 130 37 chr2 90022112 90022713 -163233870 - L2 LINE L2 -717 2597 1941 2193 108 7 3 chr2 90023101 90023398 -163233185 - AluSx SINE Alu -14 298 1 2370 111 0 0 chr2 90024339 90024646 -163231937 + AluSx SINE Alu 1 307 -5 1964 160 3 0 chr2 90024659 90024953 -163231630 + AluSx SINE Alu 1 295 -17 229 179 0 0 chr2 90024963 90025002 -163231581 + U2 snRNA snRNA 1 39 -149 803 242 160 24 chr2 90025013 90025463 -163231120 + L1MC5 LINE L1 7406 7916 -45 342 0 0 0 chr2 90025485 90025523 -163231060 + (CA)n Simple_repeat Simple_repeat 2 39 0 1914 163 0 3 chr2 90026042 90026343 -163230240 - AluJb SINE Alu -11 301 2 2362 87 7 0 chr2 90026353 90026651 -163229932 - AluSx SINE Alu -12 300 1 2069 138 10 0 chr2 90027053 90027343 -163229240 - AluSx SINE Alu -19 293 1 628 250 54 12 chr2 90027602 90027770 -163228813 + MIR SINE MIR 88 262 0 21 36 0 0 chr2 90028145 90028173 -163228410 + AT_rich Low_complexity Low_complexity 1 28 0 1130 200 33 5 chr2 90028252 90028462 -163228121 - MER20 DNA MER1_type -3 216 1 2396 88 0 7 chr2 90028490 90028795 -163227788 + AluSx SINE Alu 1 303 -9 193 167 0 74 chr2 90029034 90029088 -163227495 - L2 LINE L2 -104 3209 3160 2295 118 0 6 chr2 90029684 90029998 -163226585 + AluSq SINE Alu 1 312 -1 769 121 271 0 chr2 90030004 90030144 -163226439 + AluSg/x SINE Alu 127 304 -6 2027 134 10 0 chr2 90031273 90031565 -163225018 - AluJb SINE Alu -17 295 1 23 0 0 0 chr2 90031671 90031694 -163224889 + AT_rich Low_complexity Low_complexity 1 23 0 803 128 8 0 chr2 90031953 90032070 -163224513 + AluJb SINE Alu 1 118 -194 750 101 28 9 chr2 90032137 90032246 -163224337 - HY1 scRNA scRNA 0 112 2 976 156 19 0 chr2 90033136 90033296 -163223287 + AluJb SINE Alu 138 300 -12 1970 121 7 21 chr2 90033350 90033640 -163222943 - AluSx SINE Alu -26 286 1 2406 66 0 10 chr2 90033693 90033994 -163222589 - AluSc SINE Alu -11 298 1 27 0 0 0 chr2 90034266 90034293 -163222290 + AT_rich Low_complexity Low_complexity 1 27 0 423 156 31 0 chr2 90034431 90034495 -163222088 - AluS SINE Alu -242 67 2 2308 87 0 0 chr2 90034744 90035031 -163221552 + AluSc SINE Alu 1 287 -22 1585 169 66 0 chr2 90035237 90035509 -163221074 + AluJo SINE Alu 5 294 -18 1524 160 31 27 chr2 90035524 90035817 -163220766 - Charlie4 DNA MER1_type -1664 297 4 1953 121 53 0 chr2 90035871 90036152 -163220431 + AluSq SINE Alu 1 296 -17 2325 96 7 0 chr2 90036233 90036534 -163220049 - AluSp SINE Alu -8 305 3 2129 125 3 3 chr2 90036587 90036884 -163219699 + AluSx SINE Alu 1 297 -15 377 110 68 27 chr2 90037968 90038041 -163218542 + L1MD1 LINE L1 6158 6233 -9 2229 104 3 0 chr2 90038229 90038528 -163218055 + AluSx SINE Alu 1 300 -12 2374 81 7 0 chr2 90038997 90039292 -163217291 + AluSg SINE Alu 1 297 -13 2373 73 0 7 chr2 90039349 90039650 -163216933 - AluY SINE Alu -10 301 3 2326 100 7 0 chr2 90039652 90039961 -163216622 - AluY SINE Alu 0 311 1 201 230 40 0 chr2 90040221 90040295 -163216288 + A-rich Low_complexity Low_complexity 5 81 0 2230 100 3 0 chr2 90040521 90040810 -163215773 + AluSx SINE Alu 1 290 -22 792 199 0 0 chr2 90041949 90042080 -163214503 + FLAM_C SINE Alu 1 131 -2 29 78 0 0 chr2 90042239 90042303 -163214280 + AT_rich Low_complexity Low_complexity 1 64 0 1740 170 3 13 chr2 90042312 90042612 -163213971 + AluJb SINE Alu 1 297 -15 23 33 0 0 chr2 90044018 90044048 -163212535 + AT_rich Low_complexity Low_complexity 1 30 0 1950 148 0 13 chr2 90044139 90044449 -163212134 - AluJb SINE Alu -6 306 1 585 294 191 39 chr2 90044453 90044528 -163212055 + L2 LINE L2 2698 2760 -553 1747 156 42 0 chr2 90044528 90044811 -163211772 - AluJo SINE Alu -17 295 1 585 294 191 39 chr2 90044811 90045271 -163211312 + L2 LINE L2 2760 3312 -1 2376 84 3 0 chr2 90045478 90045776 -163210807 + AluSp SINE Alu 1 299 -14 645 273 88 63 chr2 90046861 90047272 -163209311 - L1MC4a LINE L1 -1877 5931 5511 216 154 0 39 chr2 90047536 90047588 -163208995 + (TA)n Simple_repeat Simple_repeat 2 51 0 258 290 0 0 chr2 90048106 90048168 -163208415 + L2 LINE L2 3252 3313 0 2327 92 10 3 chr2 90049500 90049803 -163206780 + AluSx SINE Alu 1 305 -7 2419 77 0 10 chr2 90050213 90050523 -163206060 + AluY SINE Alu 1 307 -4 2221 104 3 3 chr2 90050525 90050823 -163205760 + AluSg SINE Alu 1 298 -12 1821 187 3 42 chr2 90050869 90050959 -163205624 - MER2 DNA MER2_type 0 344 252 2312 99 6 3 chr2 90050959 90051271 -163205312 + AluSq SINE Alu 1 313 0 1821 187 3 42 chr2 90051271 90051538 -163205045 - MER2 DNA MER2_type -92 252 1 1282 199 25 32 chr2 90052007 90052284 -163204299 + AluJo SINE Alu 35 309 -3 2399 80 0 3 chr2 90052444 90052745 -163203838 - AluSx SINE Alu -12 300 1 2260 113 0 0 chr2 90052784 90053085 -163203498 + AluSx SINE Alu 1 301 -11 26 30 0 0 chr2 90053750 90053783 -163202800 + AT_rich Low_complexity Low_complexity 1 33 0 1660 141 0 100 chr2 90054732 90055073 -163201510 + AluJb SINE Alu 6 312 0 859 152 0 0 chr2 90055489 90055621 -163200962 - FLAM_C SINE Alu -10 133 2 24 32 0 0 chr2 90055753 90055784 -163200799 + AT_rich Low_complexity Low_complexity 1 31 0 534 266 226 46 chr2 90055799 90056321 -163200262 - L1MC4a LINE L1 -1747 6061 5446 1500 154 7 40 chr2 90056354 90056626 -163199957 - AluJo SINE Alu -20 292 30 25 31 0 0 chr2 90056626 90056658 -163199925 + AT_rich Low_complexity Low_complexity 1 32 0 290 197 22 6 chr2 90056667 90056753 -163199830 + MLT1G LTR MaLR 495 583 0 348 244 112 39 chr2 90056754 90056917 -163199666 + MLT1G1-int LTR MaLR 2 176 -1225 225 209 0 0 chr2 90056935 90056978 -163199605 + MLT1G1-int LTR MaLR 304 346 -1389 2119 82 64 0 chr2 90057086 90057367 -163199216 + AluY SINE Alu 1 299 -12 257 349 63 11 chr2 90057766 90057941 -163198642 + MLT1G1-int LTR MaLR 700 883 -488 516 235 65 141 chr2 90058130 90058500 -163198083 + MLT1G1-int LTR MaLR 1029 1370 -1 1170 260 85 26 chr2 90058508 90058938 -163197645 + MLT1G1 LTR MaLR 18 454 -113 285 191 53 63 chr2 90059016 90059129 -163197454 - L1MC5 LINE L1 -982 7060 6876 3077 165 29 68 chr2 90059223 90059808 -163196775 - L1MB5 LINE L1 -17 6157 5598 2324 83 3 7 chr2 90059808 90060109 -163196474 + AluSp SINE Alu 1 300 -13 3077 165 29 68 chr2 90060109 90060172 -163196411 - L1MB5 LINE L1 -576 5598 5534 680 110 0 0 chr2 90060276 90060367 -163196216 - L1M3 LINE L1 -605 5575 5485 1296 99 6 0 chr2 90060369 90060540 -163196043 - AluSp SINE Alu -20 293 122 908 141 19 6 chr2 90060543 90060699 -163195884 - L1M3 LINE L1 -705 5479 5322 252 143 0 0 chr2 90060700 90060742 -163195841 + (CA)n Simple_repeat Simple_repeat 1 42 0 1805 156 0 7 chr2 90060764 90061046 -163195537 - AluJb SINE Alu -30 282 3 621 214 64 68 chr2 90061048 90061314 -163195269 - L1M3 LINE L1 -814 5332 5068 1909 95 0 0 chr2 90061561 90061804 -163194779 - AluSx SINE Alu -16 296 54 1886 121 0 4 chr2 90063031 90063288 -163193295 + AluSc SINE Alu 2 257 -52 815 172 107 132 chr2 90063312 90063386 -163193197 + MLT2C2 LTR ERVL 1 75 -389 1931 143 20 17 chr2 90063386 90063686 -163192897 + AluJb SINE Alu 1 301 -11 815 172 107 132 chr2 90063686 90063944 -163192639 + MLT2C2 LTR ERVL 75 338 -126 2270 53 13 53 chr2 90063944 90064245 -163192338 + AluY SINE Alu 1 289 -22 815 172 107 132 chr2 90064245 90064272 -163192311 + MLT2C2 LTR ERVL 338 364 -100 1653 184 3 7 chr2 90064272 90064555 -163192028 + AluJo SINE Alu 1 282 -30 815 172 107 132 chr2 90064555 90064607 -163191976 + MLT2C2 LTR ERVL 364 459 -5 609 118 0 82 chr2 90064682 90064792 -163191791 + FLAM_C SINE Alu 35 135 -8 649 304 118 51 chr2 90064812 90065246 -163191337 - L2 LINE L2 -1 3312 2850 1962 152 0 10 chr2 90065444 90065747 -163190836 + AluJo SINE Alu 1 300 -12 1702 204 41 78 chr2 90066186 90066701 -163189882 + MLT1E3 LTR MaLR 129 624 0 189 303 0 53 chr2 90068287 90068363 -163188220 - MIR3 SINE MIR -133 75 4 954 121 0 0 chr2 90068466 90068598 -163187985 + FLAM_C SINE Alu 1 132 -1 2419 71 0 3 chr2 90068626 90068921 -163187662 + AluSq SINE Alu 1 294 -19 200 364 173 0 chr2 90069277 90069439 -163187144 + L2 LINE L2 594 783 -2531 2365 88 0 0 chr2 90069688 90069982 -163186601 + AluSx SINE Alu 1 294 -18 1262 169 118 65 chr2 90069994 90070098 -163186485 + AluJb SINE Alu 1 98 -204 2274 51 3 41 chr2 90070098 90070392 -163186191 + AluY SINE Alu 29 311 0 1262 169 118 65 chr2 90070392 90070566 -163186017 + AluJb SINE Alu 98 294 -8 1744 150 27 20 chr2 90070606 90070900 -163185683 + AluJo SINE Alu 1 296 -16 1977 85 0 11 chr2 90071053 90071325 -163185258 - AluSc SINE Alu -39 270 2 1982 60 112 4 chr2 90071330 90071597 -163184986 - AluSg SINE Alu -14 296 1 516 261 142 6 chr2 90072151 90072327 -163184256 + MIR SINE MIR 39 238 -24 379 220 120 40 chr2 90072472 90072622 -163183961 + Charlie2 DNA MER1_type 2455 2616 -246 891 261 184 30 chr2 90072873 90073002 -163183581 - L1ME2 LINE L1 -214 5950 5842 2162 84 45 0 chr2 90073002 90073288 -163183295 - AluSp SINE Alu -14 299 1 891 261 184 30 chr2 90073288 90073728 -163182855 - L1ME2 LINE L1 -322 5842 5293 947 189 68 16 chr2 90073862 90074110 -163182473 + Charlie2 DNA MER1_type 2602 2862 0 498 312 89 52 chr2 90074363 90074767 -163181816 - L3 LINE CR1 -525 1052 634 1881 120 39 0 chr2 90075024 90075308 -163181275 - AluSx SINE Alu -17 295 1 1508 118 132 48 chr2 90075355 90075400 -163181183 + MER46B DNA MER2_type 49 89 -2642 2416 75 0 19 chr2 90075400 90075707 -163180876 - AluY SINE Alu -10 301 1 1508 118 132 48 chr2 90075707 90075950 -163180633 + MER46B DNA MER2_type 89 236 0 666 288 98 0 chr2 90075990 90076205 -163180378 - MIR SINE MIR -7 255 20 2251 110 3 0 chr2 90076305 90076606 -163179977 - AluSp SINE Alu -11 302 1 438 204 23 38 chr2 90076614 90076746 -163179837 - L1MB8 LINE L1 0 6178 6049 204 293 207 9 chr2 90076803 90076919 -163179664 + MER5B DNA MER1_type 24 162 -16 2109 116 97 81 chr2 90077111 90077279 -163179304 - Tigger2 DNA MER2_type 0 2718 2554 1822 144 50 0 chr2 90077279 90077557 -163179026 + AluJb SINE Alu 1 292 -20 2109 116 97 81 chr2 90077557 90077820 -163178763 - Tigger2 DNA MER2_type -164 2554 2280 462 145 0 0 chr2 90077818 90077887 -163178696 - Tigger2 DNA MER2_type -2649 69 1 * 221 304 170 70 chr2 90077893 90078123 -163178460 + L2 LINE L2 2919 3171 -101 325 224 93 28 chr2 90078188 90078295 -163178288 + L1MB8 LINE L1 6063 6176 -2 1163 118 0 53 chr2 90078643 90078830 -163177753 - AluSg/x SINE Alu 0 312 136 340 284 82 30 chr2 90079128 90079262 -163177321 - L2 LINE L2 -2 3311 3171 24 0 0 0 chr2 90079480 90079504 -163177079 + AT_rich Low_complexity Low_complexity 1 24 0 2198 81 53 0 chr2 90079691 90079974 -163176609 + AluSg SINE Alu 1 298 -12 1101 149 0 3 chr2 90080014 90080245 -163176338 + AluSx SINE Alu 1 298 -14 2298 122 0 0 chr2 90080626 90080929 -163175654 - AluSx SINE Alu -9 303 1 209 321 0 0 chr2 90081736 90081789 -163174794 + MIR3 SINE MIR 150 202 -6 1455 140 9 0 chr2 90082135 90082349 -163174234 + AluJb SINE Alu 87 302 -10 27 73 0 0 chr2 90082548 90082603 -163173980 + AT_rich Low_complexity Low_complexity 1 55 0 866 127 0 8 chr2 90083994 90084120 -163172463 - FRAM SINE Alu -17 159 35 207 262 82 16 chr2 90084340 90084401 -163172182 - MER5A DNA MER1_type 0 189 125 22 35 0 0 chr2 90085176 90085205 -163171378 + AT_rich Low_complexity Low_complexity 1 29 0 402 269 21 52 chr2 90085235 90085428 -163171155 - MIR SINE MIR -13 249 63 183 293 86 0 chr2 90085952 90086010 -163170573 - MIR SINE MIR -58 150 88 207 0 0 0 chr2 90087346 90087369 -163169214 + (T)n Simple_repeat Simple_repeat 1 23 0 1017 149 117 59 chr2 90089931 90090153 -163166430 - MER46A DNA MER2_type 0 236 2 289 273 25 142 chr2 90090303 90090739 -163165844 + L2 LINE L2 2870 3254 -18 293 274 0 27 chr2 90091515 90091588 -163164995 - L2 LINE L2 -13 3259 3189 2262 112 16 0 chr2 90091763 90092068 -163164515 - AluSx SINE Alu -2 310 1 210 241 74 0 chr2 90093344 90093398 -163163185 - MIR3 SINE MIR -6 202 145 22 35 0 0 chr2 90093704 90093733 -163162850 + AT_rich Low_complexity Low_complexity 1 29 0 252 154 0 0 chr2 90095915 90095967 -163160616 + (CA)n Simple_repeat Simple_repeat 1 52 0 243 0 0 0 chr2 90096058 90096085 -163160498 + (TC)n Simple_repeat Simple_repeat 2 28 0 242 307 0 0 chr2 90096211 90096303 -163160280 + GA-rich Low_complexity Low_complexity 1 92 0 2340 92 3 0 chr2 90097598 90097893 -163158690 - AluSp SINE Alu -17 296 1 573 88 0 0 chr2 90098398 90098478 -163158105 + (CCA)n Simple_repeat Simple_repeat 1 80 0 400 254 59 22 chr2 90098525 90098672 -163157911 - MIR SINE MIR -62 146 33 2018 142 10 10 chr2 90098780 90099090 -163157493 - AluJo SINE Alu 0 312 3 2244 165 141 4 chr2 90099096 90099551 -163157032 + MLT1F1 LTR MaLR 1 517 -50 182 264 56 14 chr2 90100020 90100092 -163156491 + L2 LINE L2 2985 3059 -213 191 239 0 22 chr2 90100185 90100231 -163156352 + L2 LINE L2 3267 3311 -2 2432 83 3 0 chr2 90100779 90101079 -163155504 - AluSp SINE Alu -11 302 2 266 230 30 70 chr2 90101554 90101654 -163154929 + MER117 DNA MER1_type 47 142 -55 2402 89 3 10 chr2 90101921 90102234 -163154349 - AluSp SINE Alu -2 311 1 576 274 71 0 chr2 90102753 90102921 -163153662 - L3 LINE CR1 -1 1576 1397 506 300 89 11 chr2 90102969 90103149 -163153434 - MIR SINE MIR 0 262 69 418 266 124 11 chr2 90103374 90103551 -163153032 + MIR3 SINE MIR 7 203 -5 344 244 74 11 chr2 90104198 90104304 -163152279 + MER5A DNA MER1_type 49 160 -18 1989 160 3 3 chr2 90106558 90106864 -163149719 + AluJo SINE Alu 1 306 -6 192 289 145 12 chr2 90107407 90107490 -163149093 - L2 LINE L2 -1 3271 3178 418 323 148 14 chr2 90107569 90107786 -163148797 + MIR SINE MIR 16 261 -1 2400 88 3 3 chr2 90108257 90108554 -163148029 + AluSq SINE Alu 1 297 -16 267 244 77 0 chr2 90108779 90108857 -163147726 - MER103 DNA DNA -15 151 68 665 149 9 0 chr2 90108862 90108969 -163147614 + FLAM_C SINE Alu 11 118 -25 2511 51 7 0 chr2 90109061 90109355 -163147228 - AluY SINE Alu -14 297 2 1477 213 154 59 chr2 90109359 90109834 -163146749 + HsTC2a DNA Tc2 6 435 -1465 2219 127 10 0 chr2 90109834 90110142 -163146441 - AluSq SINE Alu -2 311 1 1477 213 154 59 chr2 90110142 90110222 -163146361 + HsTC2a DNA Tc2 435 506 -1394 2390 106 3 0 chr2 90110222 90110534 -163146049 + AluSp SINE Alu 1 313 0 1477 213 154 59 chr2 90110534 90110652 -163145931 + HsTC2a DNA Tc2 506 744 0 255 321 83 0 chr2 90110769 90110853 -163145730 + L2 LINE L2 3222 3312 -1 225 0 0 0 chr2 90111531 90111556 -163145027 + (A)n Simple_repeat Simple_repeat 1 25 0 252 360 66 15 chr2 90112510 90112646 -163143937 - L2 LINE L2 0 3313 3171 367 211 98 38 chr2 90113940 90114073 -163142510 + MIR3 SINE MIR 7 147 -61 362 269 172 8 chr2 90114426 90114560 -163142023 - MIR SINE MIR 0 262 107 231 241 109 92 chr2 90114760 90114934 -163141649 - L2 LINE L2 -181 3091 2915 633 193 50 92 chr2 90117099 90117185 -163139398 + MER3 DNA MER1_type 1 89 -120 2209 89 10 7 chr2 90117185 90117476 -163139107 + AluSq SINE Alu 1 292 -21 633 193 50 92 chr2 90117476 90117522 -163139061 + MER3 DNA MER1_type 89 135 -74 4359 65 5 20 chr2 90117522 90118078 -163138505 + LTR14 LTR ERVK 1 548 0 2617 50 0 0 chr2 90118087 90118386 -163138197 - AluY SINE Alu -12 299 1 633 193 50 92 chr2 90118386 90118460 -163138123 + MER3 DNA MER1_type 143 209 0 2388 104 10 0 chr2 90119014 90119323 -163137260 - AluSp SINE Alu -1 312 1 630 236 16 0 chr2 90119740 90119863 -163136720 + FLAM_A SINE Alu 1 125 -8 2055 114 38 14 chr2 90119880 90120193 -163136390 - AluSx SINE Alu 0 320 1 483 184 7 129 chr2 90120699 90120740 -163135843 - MER94 DNA DNA -5 129 85 2004 137 3 11 chr2 90120740 90121072 -163135511 - AluJb SINE Alu 0 330 1 483 184 7 129 chr2 90121072 90121176 -163135407 - MER94 DNA DNA -49 85 1 215 175 35 18 chr2 90121241 90121298 -163135285 - L2 LINE L2 -10 3262 3205 2199 97 0 4 chr2 90121317 90121595 -163134988 + AluSx SINE Alu 19 295 -17 344 283 29 23 chr2 90121847 90122007 -163134576 - MER5A DNA MER1_type -16 162 1 516 287 133 5 chr2 90124751 90124939 -163131644 + MIR SINE MIR 39 250 -12 2136 105 4 0 chr2 90125322 90125599 -163130984 + AluSx SINE Alu 1 278 -34 249 387 26 0 chr2 90126231 90126386 -163130197 + L1ME LINE L1 5604 5762 -359 28 71 0 0 chr2 90126463 90126519 -163130064 + AT_rich Low_complexity Low_complexity 1 56 0 791 204 0 0 chr2 90126520 90126652 -163129931 - FLAM_A SINE Alu -1 132 1 297 315 18 36 chr2 90127870 90127981 -163128602 - L2 LINE L2 -28 3244 3136 528 300 94 22 chr2 90128073 90128253 -163128330 - MER91A DNA MER1_type -1 195 3 1902 214 39 39 chr2 90128282 90128389 -163128194 + MER74A LTR ERVL 12 118 -440 2437 86 0 3 chr2 90128389 90128692 -163127891 + AluSg SINE Alu 1 302 -8 1902 214 39 39 chr2 90128692 90129130 -163127453 + MER74A LTR ERVL 117 557 -1 322 283 104 108 chr2 90129806 90129959 -163126624 - L1MC4a LINE L1 -1845 5963 5810 2151 91 60 7 chr2 90129959 90130244 -163126339 - AluSx SINE Alu -12 300 1 322 283 104 108 chr2 90130244 90130369 -163126214 - L1MC4a LINE L1 -1998 5810 5686 1131 195 18 14 chr2 90130567 90130788 -163125795 + MER58A DNA MER1_type 1 222 -2 1627 90 73 4 chr2 90131348 90131581 -163125002 + AluSc SINE Alu 1 249 -60 2253 93 3 6 chr2 90131697 90132010 -163124573 - AluSx SINE Alu 0 312 1 1708 180 65 38 chr2 90132782 90133265 -163123318 + MLT1E2 LTR MaLR 152 624 -2 8168 51 0 0 chr2 90133621 90134590 -163121993 + LTR5 LTR ERVK 1 969 0 473 233 17 0 chr2 90135285 90135405 -163121178 + L1ME4a LINE L1 5704 5825 -296 1993 101 0 31 chr2 90135546 90135856 -163120727 - AluSx SINE Alu 0 306 6 297 294 11 22 chr2 90136033 90136125 -163120458 + L2 LINE L2 3180 3270 -2 808 340 34 25 chr2 90137014 90137452 -163119131 + L1ME LINE L1 5 446 -5624 449 290 70 14 chr2 90137780 90137807 -163118776 + L1ME LINE L1 575 599 -5662 2689 110 24 50 chr2 90137807 90138271 -163118312 + L1PB4 LINE L1 5705 6156 0 449 290 70 14 chr2 90138271 90138457 -163118126 + L1ME LINE L1 599 800 -5461 769 199 38 9 chr2 90138475 90138660 -163117923 + L1M4 LINE L1 4924 5117 -1029 2745 22 0 0 chr2 90138660 90138978 -163117605 + AluYb8 SINE Alu 1 318 0 769 199 38 9 chr2 90138978 90139003 -163117580 + L1M4 LINE L1 5117 5140 -1006 2269 100 0 0 chr2 90139048 90139357 -163117226 + AluY SINE Alu 1 309 -2 1408 160 0 41 chr2 90139375 90139448 -163117135 + AluJo SINE Alu 40 114 -198 2039 124 42 55 chr2 90139448 90139828 -163116755 + THE1C LTR MaLR 1 375 0 1408 160 0 41 chr2 90139828 90140022 -163116561 + AluJo SINE Alu 114 296 -16 952 178 11 0 chr2 90140022 90140213 -163116370 + L1M4 LINE L1 5140 5332 -814 4073 253 30 27 chr2 90140251 90141487 -163115096 + L1M4 LINE L1 3928 5167 -979 926 125 26 0 chr2 90141487 90141639 -163114944 + LTR54 LTR ERV1 350 505 -5 654 182 8 0 chr2 90141923 90142044 -163114539 + MER4B LTR ERV1 1 122 -488 582 181 77 13 chr2 90142058 90142213 -163114370 + L1M4 LINE L1 5152 5316 -830 957 142 7 5 chr2 90142218 90142402 -163114181 + L1M4 LINE L1 5207 5391 -777 2106 97 7 0 chr2 90142487 90142817 -163113766 - AluSp SINE Alu 0 313 1 771 259 52 91 chr2 90142826 90143264 -163113319 + L1MCa LINE L1 924 1321 -5105 1652 147 0 8 chr2 90143264 90143558 -163113025 + AluSx SINE Alu 33 312 0 771 259 52 91 chr2 90143558 90143887 -163112696 + L1MCa LINE L1 1321 1661 -4765 2045 115 3 0 chr2 90144263 90144551 -163112032 + AluSq SINE Alu 1 289 -24 180 305 178 54 chr2 90144563 90144878 -163111705 + L2 LINE L2 1746 2099 -1215 457 346 28 70 chr2 90144943 90145163 -163111420 + L2 LINE L2 2478 2706 -608 1724 140 0 57 chr2 90145163 90145478 -163111105 + AluJb SINE Alu 1 297 -15 457 346 28 70 chr2 90145478 90145605 -163110978 + L2 LINE L2 2706 2806 -508 1757 147 7 20 chr2 90145605 90145905 -163110678 - AluJb SINE Alu -13 299 4 457 346 28 70 chr2 90145905 90145987 -163110596 + L2 LINE L2 2806 2890 -424 460 346 107 7 chr2 90146029 90146309 -163110274 + L2 LINE L2 3006 3313 0 523 249 209 0 chr2 90147422 90147623 -163108960 + ERVL LTR ERVL 3615 3857 -1907 1910 211 75 5 chr2 90147652 90148065 -163108518 + MER74A LTR ERVL 1 442 -116 275 208 28 14 chr2 90148095 90148167 -163108416 + MER74B LTR ERVL 550 622 0 2023 306 42 19 chr2 90148250 90149052 -163107531 + ERVL LTR ERVL 3990 4810 -954 728 205 154 0 chr2 90149092 90149248 -163107335 + MER5A DNA MER1_type 10 189 0 782 292 33 45 chr2 90149251 90149601 -163106982 + ERVL LTR ERVL 4801 5130 -524 2112 102 3 3 chr2 90149601 90149895 -163106688 + AluSx SINE Alu 6 299 -13 782 292 33 45 chr2 90149895 90150051 -163106532 + ERVL LTR ERVL 5130 5286 -368 1431 215 64 33 chr2 90150096 90150487 -163106096 + LTR37A LTR ERV1 24 426 0 25 31 0 0 chr2 90150576 90150608 -163105975 + AT_rich Low_complexity Low_complexity 1 32 0 446 224 35 17 chr2 90151351 90151467 -163105116 + MER74A LTR ERVL 386 503 -55 305 203 43 0 chr2 90151489 90151558 -163105025 - MER5A DNA MER1_type -109 80 9 300 343 78 39 chr2 90151598 90151796 -163104787 - L2 LINE L2 -481 2833 2644 1911 200 96 23 chr2 90151796 90152267 -163104316 + MLT1D LTR MaLR 1 505 0 300 343 78 39 chr2 90152267 90152453 -163104130 - L2 LINE L2 -670 2644 2434 289 345 14 36 chr2 90153285 90153424 -163103159 - MIR SINE MIR -107 155 20 2020 107 7 0 chr2 90153672 90153961 -163102622 + AluSg SINE Alu 1 291 -19 217 319 0 14 chr2 90154071 90154140 -163102443 - MIR SINE MIR -192 70 3 210 267 0 0 chr2 90154176 90154221 -163102362 - MIR SINE MIR -67 141 97 604 285 89 70 chr2 90155263 90155621 -163100962 + L2 LINE L2 2908 3272 0 251 322 14 63 chr2 90156084 90156227 -163100356 - MIR SINE MIR -118 144 9 240 285 91 91 chr2 90156461 90156770 -163099813 + L2 LINE L2 2963 3271 -1 676 286 52 4 chr2 90157739 90157970 -163098613 - MIR SINE MIR 0 262 21 180 290 32 32 chr2 90158040 90158102 -163098481 + L2 LINE L2 3205 3266 -6 1104 160 63 5 chr2 90158565 90158771 -163097812 + MER20 DNA MER1_type 1 218 -1 1886 152 3 0 chr2 90159420 90159710 -163096873 - AluSx SINE Alu -21 291 1 1139 264 115 60 chr2 90160199 90160337 -163096246 - L1ME3A LINE L1 -222 5948 5819 2084 121 3 3 chr2 90160337 90160644 -163095939 - AluSx SINE Alu -5 307 1 625 192 16 24 chr2 90160652 90160777 -163095806 - FLAM_A SINE Alu -8 125 2 1139 264 115 60 chr2 90160777 90162189 -163094394 - L1ME3A LINE L1 -357 5813 4317 890 235 27 51 chr2 90162237 90162315 -163094268 + L1ME1 LINE L1 5850 5928 -238 1610 109 0 0 chr2 90162315 90162536 -163094047 - AluSg/x SINE Alu -8 304 84 890 235 27 51 chr2 90162536 90162751 -163093832 + L1ME1 LINE L1 5928 6136 -30 236 224 86 59 chr2 90162634 90162786 -163093797 + L1MA10 LINE L1 6179 6334 0 * 319 291 170 12 chr2 90163329 90163494 -163093089 - MIR SINE MIR -70 192 2 246 343 91 18 chr2 90163902 90164087 -163092496 - MIR SINE MIR -58 150 3 356 350 81 0 chr2 90164399 90164559 -163092024 + MIR SINE MIR 20 192 -70 244 186 0 0 chr2 90164680 90164723 -163091860 - L2 LINE L2 -1 3312 3270 257 317 37 0 chr2 90165312 90165394 -163091189 - MIR SINE MIR -76 186 102 261 0 0 0 chr2 90165394 90165423 -163091160 + (TTCA)n Simple_repeat Simple_repeat 3 31 0 246 235 0 0 chr2 90165429 90165480 -163091103 - L2 LINE L2 -1 3312 3262 234 307 40 0 chr2 90165489 90165564 -163091019 - MIR SINE MIR -169 93 16 1011 207 19 19 chr2 90165701 90165914 -163090669 + L1ME1 LINE L1 5938 6150 -16 2267 124 83 65 chr2 90166149 90166642 -163089941 + L1MB2 LINE L1 5670 6171 0 423 0 0 0 chr2 90167046 90167093 -163089490 + (TAGA)n Simple_repeat Simple_repeat 1 47 0 201 74 0 0 chr2 90167361 90167388 -163089195 + (GAAAA)n Simple_repeat Simple_repeat 2 28 0 2159 76 0 47 chr2 90167844 90168161 -163088422 - AluY SINE Alu -9 302 1 492 291 70 0 chr2 90168568 90168726 -163087857 - MIR SINE MIR -41 221 53 404 316 52 56 chr2 90168799 90168897 -163087686 - Charlie7 DNA MER1_type -2156 456 359 2227 104 0 0 chr2 90168897 90169195 -163087388 + AluSq SINE Alu 1 298 -15 404 316 52 56 chr2 90169195 90169384 -163087199 - Charlie7 DNA MER1_type -2253 359 170 228 294 62 75 chr2 90169562 90169708 -163086875 + MIR3 SINE MIR 20 163 -45 337 260 55 24 chr2 90170606 90170733 -163085850 + MIR3 SINE MIR 3 133 -75 269 244 12 58 chr2 90170731 90170817 -163085766 - L2 LINE L2 0 3313 3232 * 847 190 162 0 chr2 90171598 90171777 -163084806 - MER20 DNA MER1_type -11 208 1 243 228 79 20 chr2 90172116 90172217 -163084366 - L1ME4a LINE L1 -27 6094 5988 272 319 138 31 chr2 90172348 90172602 -163083981 - L3 LINE CR1 -29 1548 1268 536 286 110 0 chr2 90173688 90173842 -163082741 + MIR SINE MIR 21 191 -71 732 272 62 0 chr2 90174729 90174953 -163081630 + L1ME4a LINE L1 5525 5762 -359 230 200 0 33 chr2 90175116 90175176 -163081407 + L1ME4a LINE L1 6008 6065 -56 1497 169 3 45 chr2 90175370 90175532 -163081051 - AluJo SINE Alu -17 295 151 1977 126 7 10 chr2 90175532 90175841 -163080742 - AluSx SINE Alu -4 308 1 1497 169 3 45 chr2 90175841 90175986 -163080597 - AluJo SINE Alu -161 151 1 344 293 38 66 chr2 90176001 90176213 -163080370 - L2 LINE L2 -216 3056 2851 246 255 125 60 chr2 90176739 90176923 -163079660 - L3 LINE CR1 -5 1572 1377 292 279 0 0 chr2 90177555 90177623 -163078960 + MLT1K LTR MaLR 509 576 -12 791 167 14 0 chr2 90177829 90177967 -163078616 - MER5A DNA MER1_type 0 189 50 567 128 224 19 chr2 90178270 90178426 -163078157 - L1ME LINE L1 -442 5724 5537 2149 95 10 0 chr2 90179245 90179540 -163077043 + AluSx SINE Alu 1 298 -14 402 244 87 140 chr2 90179541 90179803 -163076780 + L1ME4a LINE L1 5609 5884 -237 1574 145 126 4 chr2 90179803 90180072 -163076511 + AluJb SINE Alu 1 302 0 465 93 0 13 chr2 90180006 90180081 -163076502 + Alu SINE Alu 237 310 -1 402 244 87 140 chr2 90180072 90180329 -163076254 + L1ME4a LINE L1 5884 6100 -21 * 1082 139 0 65 chr2 90180666 90180867 -163075716 + AluSg/x SINE Alu 85 272 -40 302 228 78 3 chr2 90180967 90181083 -163075500 + MIR SINE MIR 25 148 -60 329 241 13 0 chr2 90181083 90181162 -163075421 - MLT1K LTR MaLR 0 588 509 822 145 0 0 chr2 90181334 90181458 -163075125 - MER73 LTR ERVL 0 644 521 1396 143 75 23 chr2 90181467 90181733 -163074850 - MER73 LTR ERVL -349 295 16 1684 214 6 28 chr2 90181829 90182184 -163074399 - MLT1A2 LTR MaLR -4 370 24 268 224 0 17 chr2 90182237 90182295 -163074288 - MLT1K LTR MaLR -346 242 186 302 330 66 9 chr2 90182415 90182521 -163074062 + L2 LINE L2 3138 3249 -23 1986 149 63 0 chr2 90182568 90182883 -163073700 + MER7A DNA MER2_type 14 346 0 219 139 0 0 chr2 90183014 90183050 -163073533 + (TC)n Simple_repeat Simple_repeat 1 36 0 183 80 0 0 chr2 90183050 90183075 -163073508 + (TG)n Simple_repeat Simple_repeat 2 26 0 214 279 81 66 chr2 90183489 90183625 -163072958 + L3 LINE CR1 250 387 -1190 1859 218 57 7 chr2 90183666 90184106 -163072477 - MLT1C LTR MaLR 0 467 6 248 374 17 26 chr2 90184192 90184307 -163072276 + L3 LINE CR1 1460 1573 -4 640 140 0 0 chr2 90184883 90184976 -163071607 + FRAM SINE Alu 71 163 -13 511 300 29 0 chr2 90184978 90185118 -163071465 + MIR SINE MIR 92 235 -27 1112 142 0 118 chr2 90185431 90185677 -163070906 - AluJo SINE Alu -11 301 85 392 306 9 19 chr2 90185798 90185906 -163070677 - MIR3 SINE MIR -50 158 52 224 276 53 13 chr2 90185939 90186015 -163070568 + MIR SINE MIR 106 184 -78 683 245 153 16 chr2 90186091 90186340 -163070243 - Charlie8 DNA MER1_type -2131 286 4 1538 162 0 68 chr2 90186994 90187315 -163069268 - AluJo SINE Alu -13 299 1 189 326 75 48 chr2 90187664 90187811 -163068772 + MIR SINE MIR 61 211 -51 304 299 101 86 chr2 90188046 90188501 -163068082 + MLT1L LTR MaLR 50 511 -77 2230 99 0 29 chr2 90188579 90188892 -163067691 + AluSq SINE Alu 1 304 -9 2204 100 0 0 chr2 90188899 90189189 -163067394 + AluSq SINE Alu 1 290 -23 359 327 162 7 chr2 90189302 90189574 -163067009 + L1MC4 LINE L1 7356 7669 -373 3778 194 88 10 chr2 90189761 90190628 -163065955 + Charlie1a DNA MER1_type 23 956 -499 2301 93 3 0 chr2 90190709 90191020 -163065563 - AluSx SINE Alu 0 312 1 348 296 28 21 chr2 90191047 90191189 -163065394 + L1MC4 LINE L1 7801 7943 -99 807 222 21 21 chr2 90191447 90191636 -163064947 - MER5A DNA MER1_type 0 189 1 393 221 42 0 chr2 90191668 90191763 -163064820 + MLT1C LTR MaLR 1 99 -368 1564 143 8 8 chr2 90191796 90192047 -163064536 + AluSx SINE Alu 62 312 0 1778 191 60 6 chr2 90192054 90192420 -163064163 + MLT1C LTR MaLR 82 467 0 1384 264 78 84 chr2 90192420 90193155 -163063428 + L1ME LINE L1 339 1070 -5049 2104 80 14 11 chr2 90193155 90193442 -163063141 - AluSq SINE Alu -25 288 1 1384 264 78 84 chr2 90193442 90193543 -163063040 + L1ME LINE L1 1070 1170 -4949 1401 281 107 26 chr2 90193614 90194352 -163062231 + L1ME LINE L1 3440 4237 -1892 422 222 68 43 chr2 90194375 90194582 -163062001 + L1ME LINE L1 4332 4543 -1586 773 172 0 0 chr2 90194585 90194713 -163061870 + AluJo SINE Alu 2 129 -173 802 152 23 0 chr2 90194713 90194845 -163061738 - AluJb SINE Alu -20 292 158 1298 150 0 35 chr2 90194850 90195076 -163061507 - AluJb SINE Alu -94 218 1 833 182 38 6 chr2 90195091 90195250 -163061333 + AluJo SINE Alu 132 295 -17 1298 163 0 73 chr2 90195261 90195549 -163061034 + AluJo SINE Alu 40 306 -6 1408 253 82 31 chr2 90195643 90195689 -163060894 + L1ME LINE L1 4616 4658 -1487 2153 125 27 33 chr2 90195689 90196025 -163060558 + MER1B DNA MER1_type 4 337 0 1408 253 82 31 chr2 90196025 90196887 -163059696 + L1ME LINE L1 4658 5564 -581 363 329 6 6 chr2 90196889 90197053 -163059530 + L1ME LINE L1 4698 4861 -1285 349 277 38 58 chr2 90197053 90197254 -163059329 + L1ME LINE L1 5591 5798 -366 811 208 0 23 chr2 90197423 90197596 -163058987 + FRAM SINE Alu 1 168 -8 2020 183 92 55 chr2 90197700 90198187 -163058396 + MLT1D LTR MaLR 1 505 0 228 264 28 14 chr2 90198439 90198511 -163058072 + MIR SINE MIR 20 92 -116 200 209 0 0 chr2 90198602 90198645 -163057938 + (CAAT)n Simple_repeat Simple_repeat 3 45 0 2207 105 3 0 chr2 90198753 90199059 -163057524 + AluSq SINE Alu 1 307 -6 385 318 81 17 chr2 90199101 90199274 -163057309 - L3 LINE CR1 -138 1439 1256 297 316 96 7 chr2 90199274 90199410 -163057173 + MIR3 SINE MIR 43 190 -18 363 270 42 95 chr2 90199455 90199644 -163056939 - L1MEd LINE L1 -5150 969 791 24 0 0 0 chr2 90199646 90199670 -163056913 + AT_rich Low_complexity Low_complexity 1 24 0 852 296 111 14 chr2 90199670 90199891 -163056692 - L2 LINE L2 -367 2947 2749 2296 81 0 0 chr2 90199891 90200189 -163056394 - AluY SINE Alu -13 298 1 852 296 111 14 chr2 90200189 90200382 -163056201 - L2 LINE L2 -565 2749 2493 2090 101 7 3 chr2 90200722 90201019 -163055564 + AluSc SINE Alu 1 298 -11 2078 147 141 59 chr2 90201020 90201730 -163054853 - LTR1B LTR ERV1 0 826 1 350 208 42 0 chr2 90202013 90202085 -163054498 - MER5A DNA MER1_type -108 81 7 215 321 18 73 chr2 90202192 90202301 -163054282 - L2 LINE L2 -140 3132 3030 842 215 77 90 chr2 90202618 90202737 -163053846 + MLT1I LTR MaLR 95 214 -195 432 0 0 0 chr2 90202737 90202785 -163053798 + (TG)n Simple_repeat Simple_repeat 2 49 0 1754 131 11 7 chr2 90202785 90203067 -163053516 - AluJb SINE Alu -29 283 1 842 215 77 90 chr2 90203067 90203258 -163053325 + MLT1I LTR MaLR 212 402 -7 456 273 140 54 chr2 90203407 90203685 -163052898 - MLT1K LTR MaLR -161 427 126 378 134 0 0 chr2 90204759 90204826 -163051757 + (CA)n Simple_repeat Simple_repeat 2 68 0 253 316 53 26 chr2 90205262 90205376 -163051207 - MIR3 SINE MIR -78 130 14 184 222 0 56 chr2 90205378 90205432 -163051151 - L2 LINE L2 -8 3264 3214 204 247 14 130 chr2 90206377 90206523 -163050060 - L2 LINE L2 -5 3267 3139 187 188 266 62 chr2 90206792 90206920 -163049663 + MIR3 SINE MIR 7 160 -48 330 275 29 23 chr2 90207423 90207594 -163048989 + L1ME4a LINE L1 5932 6103 -18 2349 60 0 7 chr2 90207891 90208192 -163048391 + AluSg SINE Alu 1 299 -11 26 0 0 0 chr2 90209388 90209414 -163047169 + GC_rich Low_complexity Low_complexity 1 26 0 25 31 0 0 chr2 90209729 90209761 -163046822 + GC_rich Low_complexity Low_complexity 1 32 0 200 156 0 78 chr2 90209833 90209897 -163046686 + (CGGG)n Simple_repeat Simple_repeat 3 61 0 33 43 0 0 chr2 90210006 90210053 -163046530 + GC_rich Low_complexity Low_complexity 1 47 0 226 260 0 0 chr2 90210713 90210763 -163045820 - MER96B DNA MER1_type? -175 242 193 481 184 8 88 chr2 90210793 90210827 -163045756 + MER96B DNA MER1_type? 300 335 -82 2140 67 42 0 chr2 90210827 90211112 -163045471 - AluSg SINE Alu -3 307 11 481 184 8 88 chr2 90211112 90211202 -163045381 + MER96B DNA MER1_type? 335 414 -3 1226 191 68 22 chr2 90211531 90211964 -163044619 + MER74A LTR ERVL 2 528 -30 183 80 0 0 chr2 90212454 90212479 -163044104 + (GAAA)n Simple_repeat Simple_repeat 1 25 0 268 306 36 27 chr2 90212805 90212916 -163043667 + MLT1K LTR MaLR 190 301 -287 2111 101 0 16 chr2 90212995 90213301 -163043282 - AluY SINE Alu -9 302 2 2577 253 32 26 chr2 90213303 90214109 -163042474 + L1MEc LINE L1 120 930 -5466 2565 172 83 77 chr2 90214086 90214500 -163042083 + L1ME1 LINE L1 5362 5772 -463 * 2050 130 3 0 chr2 90214500 90214799 -163041784 - AluSx SINE Alu -12 300 1 2565 172 83 77 chr2 90214799 90215339 -163041244 + L1ME1 LINE L1 5772 6230 -5 770 295 107 59 chr2 90215409 90216264 -163040319 - L1M4 LINE L1 -821 5325 4432 541 221 30 103 chr2 90216291 90216392 -163040191 - L1ME LINE L1 -320 5801 5694 729 186 0 16 chr2 90216392 90216521 -163040062 + FLAM_A SINE Alu 1 127 -6 541 221 30 103 chr2 90216521 90216682 -163039901 - L1ME LINE L1 -427 5694 5558 3866 250 63 16 chr2 90217235 90218229 -163038354 + MER69B DNA AcHobo 76 1127 -1399 4180 72 8 75 chr2 90218229 90218884 -163037699 - SVA Other Other -1 1385 775 3866 250 63 16 chr2 90218884 90218989 -163037594 + MER69B DNA AcHobo 1127 1226 0 423 199 83 111 chr2 90218990 90219313 -163037270 - L1ME LINE L1 -824 5322 5123 877 132 7 7 chr2 90219383 90219519 -163037064 - U8 snRNA snRNA 0 136 1 216 354 30 0 chr2 90219520 90219619 -163036964 - L3 LINE CR1 -757 820 719 694 277 152 10 chr2 90219627 90220113 -163036470 - MLT1L LTR MaLR 0 615 7 1685 208 60 27 chr2 90220139 90220587 -163035996 - MLT1C LTR MaLR -4 463 1 1956 119 0 49 chr2 90221026 90221354 -163035229 + AluSx SINE Alu 1 312 0 241 261 130 43 chr2 90221699 90221791 -163034792 + MLT1K LTR MaLR 183 282 -306 1874 109 27 34 chr2 90222159 90222453 -163034130 - AluSx SINE Alu -18 294 3 262 282 154 0 chr2 90222903 90223013 -163033570 + MIR SINE MIR 74 200 -62 2475 209 79 15 chr2 90223023 90223568 -163033015 + MLT1G LTR MaLR 1 580 -10 666 96 22 0 chr2 90223782 90223917 -163032666 + (TA)n Simple_repeat Simple_repeat 1 138 0 411 21 0 0 chr2 90223916 90223964 -163032619 + (GA)n Simple_repeat Simple_repeat 2 49 0 * 1521 181 4 18 chr2 90223964 90224241 -163032342 - AluJo SINE Alu -39 273 1 2513 152 80 50 chr2 90224555 90225093 -163031490 + MLT2B3 LTR ERVL 1 554 0 989 191 27 16 chr2 90225624 90225807 -163030776 + MIR SINE MIR 13 197 -65 844 258 19 1 chr2 90225807 90226026 -163030557 + L1ME1 LINE L1 5376 5613 -551 1724 236 43 53 chr2 90226055 90226580 -163030003 + L1ME1 LINE L1 5585 6106 -60 1796 120 33 0 chr2 90226580 90226887 -163029696 + AluSx SINE Alu 2 317 0 1724 236 43 53 chr2 90226887 90226944 -163029639 + L1ME1 LINE L1 6106 6162 -4 435 256 31 39 chr2 90227096 90227225 -163029358 + L2 LINE L2 3186 3313 0 680 71 10 0 chr2 90228244 90228343 -163028240 + (TCTA)n Simple_repeat Simple_repeat 3 102 0 2957 195 53 0 chr2 90228374 90228943 -163027640 - MLT2F LTR ERVL -60 603 5 1586 101 50 0 chr2 90229191 90229410 -163027173 + MER30 DNA MER1_type 1 230 0 774 199 0 41 chr2 90229477 90229648 -163026935 + L2 LINE L2 3150 3313 0 301 236 32 73 chr2 90229816 90229939 -163026644 + MIR SINE MIR 94 211 -51 606 223 0 0 chr2 90230258 90230370 -163026213 - MER82 DNA MER2_type 0 653 542 2657 156 24 49 chr2 90230370 90230755 -163025828 + LTR42 LTR ERVL 1 371 -124 4212 47 2 0 chr2 90230755 90231244 -163025339 - L1PA4 LINE L1 0 6155 5666 2657 156 24 49 chr2 90231244 90231366 -163025217 + LTR42 LTR ERVL 371 495 0 2752 210 7 18 chr2 90231382 90231934 -163024649 - MER82 DNA MER2_type -107 546 1 364 174 28 22 chr2 90232315 90232444 -163024139 + (TA)n Simple_repeat Simple_repeat 1 133 -46 2264 111 0 0 chr2 90232444 90232732 -163023851 - AluSx SINE Alu -24 288 1 364 174 28 22 chr2 90232732 90232780 -163023803 + (TA)n Simple_repeat Simple_repeat 133 179 0 642 199 174 20 chr2 90234025 90234226 -163022357 - ORSL DNA AcHobo 0 275 44 1476 177 60 35 chr2 90234290 90234572 -163022011 - AluJo SINE Alu -23 289 1 2176 134 0 0 chr2 90234745 90235043 -163021540 + AluSx SINE Alu 1 298 -14 1939 183 20 6 chr2 90235090 90235435 -163021148 + MLT1A1 LTR MaLR 1 350 -15 2047 145 0 3 chr2 90235511 90235808 -163020775 + AluSq SINE Alu 1 296 -17 2287 101 3 0 chr2 90236204 90236502 -163020081 + AluSx SINE Alu 1 299 -13 2705 112 40 81 chr2 90236674 90236936 -163019647 - MSTA LTR MaLR 0 428 190 1687 137 57 0 chr2 90236936 90237198 -163019385 - AluSg SINE Alu -33 277 1 2705 112 40 81 chr2 90237198 90237381 -163019202 - MSTA LTR MaLR -238 190 1 2135 192 19 12 chr2 90237389 90237801 -163018782 + MLT1C LTR MaLR 53 467 0 253 261 109 11 chr2 90238203 90238295 -163018288 - MIR SINE MIR -6 256 156 379 206 43 106 chr2 90238443 90238584 -163017999 + MIR SINE MIR 131 262 0 1920 124 31 7 chr2 90238882 90239173 -163017410 - AluSx SINE Alu -14 298 1 420 261 33 54 chr2 90239222 90239406 -163017177 + MIR SINE MIR 56 235 -27 915 238 25 0 chr2 90239557 90239759 -163016824 - MIR SINE MIR -24 238 32 376 295 137 32 chr2 90240098 90240288 -163016295 + MIR SINE MIR 47 256 -6 305 179 26 64 chr2 90240532 90240610 -163015973 - MIR SINE MIR -84 124 50 252 0 0 0 chr2 90240821 90240849 -163015734 + (A)n Simple_repeat Simple_repeat 1 28 0 191 247 164 27 chr2 90241214 90241287 -163015296 + L3 LINE CR1 1490 1572 -5 793 232 39 6 chr2 90241436 90241617 -163014966 + MER5A DNA MER1_type 2 188 -1 646 188 0 91 chr2 90242623 90242799 -163013784 - LTR41 LTR ERVL -6 767 608 1341 183 289 3 chr2 90242845 90243205 -163013378 - LTR41 LTR ERVL -310 463 1 818 267 177 11 chr2 90243335 90243799 -163012784 + L1ME4a LINE L1 5578 6118 -3 29 28 0 0 chr2 90244365 90244401 -163012182 + AT_rich Low_complexity Low_complexity 1 36 0 265 179 36 0 chr2 90244711 90244767 -163011816 + MER3 DNA MER1_type 151 208 -1 512 323 107 40 chr2 90245173 90245548 -163011035 + LTR16A LTR ERVL 25 424 -26 427 222 33 0 chr2 90245564 90245654 -163010929 + HERV16 LTR ERVL 1 93 -4903 275 229 129 0 chr2 90245740 90245810 -163010773 - L2 LINE L2 -512 2802 2724 493 201 78 52 chr2 90245810 90245964 -163010619 + L1MC5 LINE L1 7335 7492 -469 510 326 48 25 chr2 90246494 90246975 -163009608 + L1MC4a LINE L1 5338 5829 -1979 3077 115 19 19 chr2 90247180 90247660 -163008923 - L1MA5 LINE L1 0 7719 7240 498 33 0 0 chr2 90247660 90247720 -163008863 + (TC)n Simple_repeat Simple_repeat 1 60 0 1438 159 14 71 chr2 90247720 90248015 -163008568 - AluJb SINE Alu -34 278 1 14662 171 27 68 chr2 90248017 90248181 -163008402 - L1MA5 LINE L1 -468 7251 7082 2373 128 16 34 chr2 90248181 90248563 -163008020 + THE1C LTR MaLR 1 375 0 14662 171 27 68 chr2 90248563 90248951 -163007632 - L1MA5 LINE L1 -637 7082 6680 2174 114 0 13 chr2 90248951 90249257 -163007326 - AluSx SINE Alu -10 302 1 14662 171 27 68 chr2 90249257 90250199 -163006384 - L1MA5 LINE L1 -1039 6680 5701 2153 112 3 3 chr2 90250199 90250493 -163006090 - AluSx SINE Alu -18 294 1 14662 171 27 68 chr2 90250493 90250656 -163005927 - L1MA5 LINE L1 -2018 5701 5533 2101 76 8 0 chr2 90250656 90250920 -163005663 - AluY SINE Alu -6 305 40 14662 171 27 68 chr2 90250920 90252875 -163003708 - L1MA5 LINE L1 -2186 5533 3860 2217 92 37 7 chr2 90252875 90253169 -163003414 - AluSx SINE Alu -7 305 3 14662 171 27 68 chr2 90253169 90254613 -163001970 - L1MA5 LINE L1 -3859 3860 2359 741 322 62 41 chr2 90254708 90255195 -163001388 - L1MA5 LINE L1 -5784 1712 1216 1826 191 101 66 chr2 90255199 90255713 -163000870 - L1MD2 LINE L1 -49 6310 5779 733 204 31 40 chr2 90256337 90256562 -163000021 + MLT1J2 LTR MaLR 4 226 -224 2407 90 0 3 chr2 90256816 90257117 -162999466 + AluSg SINE Alu 1 300 -10 360 0 0 0 chr2 90258944 90258984 -162997599 + (CA)n Simple_repeat Simple_repeat 2 41 0 6433 232 22 43 chr2 90258987 90260524 -162996059 - L1MC1 LINE L1 -18 6315 4746 1862 161 43 20 chr2 90260524 90260829 -162995754 - AluJo SINE Alu 0 312 1 6433 232 22 43 chr2 90260829 90260852 -162995731 - L1MC1 LINE L1 -1587 4746 4724 1874 168 0 3 chr2 90260852 90261149 -162995434 + AluSx SINE Alu 1 296 -16 6433 232 22 43 chr2 90261149 90263158 -162993425 - L1MC1 LINE L1 -1609 4724 2838 207 0 0 0 chr2 90263164 90263187 -162993396 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 7692 45 7 0 chr2 90263231 90264736 -162991847 - L1PA7 LINE L1 -3 6151 4644 635 101 0 0 chr2 90264737 90264816 -162991767 - AluS SINE Alu -232 80 2 3982 284 36 25 chr2 90264976 90266280 -162990303 - ERVL LTR ERVL -1085 4679 3361 371 276 24 71 chr2 90266463 90266633 -162989950 - MIR SINE MIR -66 196 35 581 240 84 0 chr2 90266848 90267002 -162989581 + L1MC5 LINE L1 7719 7885 -76 438 278 8 0 chr2 90267033 90267159 -162989424 + L1M4 LINE L1 2709 2835 -3311 2329 84 7 0 chr2 90267164 90267451 -162989132 + AluSg SINE Alu 1 289 -21 1820 102 0 0 chr2 90267796 90268031 -162988552 - AluSq SINE Alu -78 235 1 412 211 138 26 chr2 90268999 90269151 -162987432 + MIR SINE MIR 79 247 -15 2645 58 0 3 chr2 90269212 90269524 -162987059 + AluY SINE Alu 1 311 0 1287 166 24 0 chr2 90269658 90269863 -162986720 - AluSx SINE Alu -44 268 59 1847 242 92 20 chr2 90269864 90270210 -162986373 - L1M4b LINE L1 -6318 541 148 2283 105 0 13 chr2 90270210 90270523 -162986060 - AluSg SINE Alu -1 309 1 1847 242 92 20 chr2 90270523 90270668 -162985915 - L1M4b LINE L1 -6711 148 15 622 245 20 7 chr2 90270716 90270867 -162985716 - LTR16A1 LTR ERVL -293 164 12 452 215 112 0 chr2 90270912 90271019 -162985564 + MER96 DNA MER1_type? 55 173 -2 2395 85 0 3 chr2 90271550 90271855 -162984728 + AluSc SINE Alu 1 304 -5 684 209 109 32 chr2 90271855 90272067 -162984516 + LTR16A1 LTR ERVL 213 444 -13 491 228 78 93 chr2 90272213 90272406 -162984177 - MLT1H1 LTR MaLR 0 555 366 768 125 34 10 chr2 90272474 90272683 -162983900 + CT-rich Low_complexity Low_complexity 1 214 0 871 138 0 0 chr2 90272684 90272800 -162983783 - FRAM SINE Alu -66 110 1 2218 108 0 10 chr2 90272809 90273105 -162983478 - AluSx SINE Alu -19 293 1 279 300 0 0 chr2 90273222 90273292 -162983291 - MIR SINE MIR -115 147 78 27 29 0 0 chr2 90274033 90274067 -162982516 + AT_rich Low_complexity Low_complexity 1 34 0 25 0 0 0 chr2 90274110 90274135 -162982448 + AT_rich Low_complexity Low_complexity 1 25 0 28 48 0 0 chr2 90274237 90274279 -162982304 + AT_rich Low_complexity Low_complexity 1 42 0 290 223 0 10 chr2 90275326 90275401 -162981182 - MIR SINE MIR -77 185 113 447 242 148 0 chr2 90275553 90275702 -162980881 + L1MC4a LINE L1 5754 5924 -1884 581 191 109 18 chr2 90275736 90275846 -162980737 + FLAM_C SINE Alu 2 121 -22 385 283 35 0 chr2 90275951 90276064 -162980519 + L1ME2 LINE L1 5937 6053 -111 709 249 12 12 chr2 90276069 90276234 -162980349 - MER58B DNA MER1_type -6 335 171 896 116 0 39 chr2 90276234 90276363 -162980220 + FLAM_C SINE Alu 2 125 -8 29 84 0 0 chr2 90276363 90276434 -162980149 + AT_rich Low_complexity Low_complexity 1 71 0 655 221 84 13 chr2 90276447 90276601 -162979982 - MER58B DNA MER1_type -176 165 1 423 204 28 9 chr2 90276601 90276709 -162979874 + L1ME2 LINE L1 6045 6154 -10 192 281 37 55 chr2 90277137 90277301 -162979282 + L2 LINE L2 1934 2094 -1220 1861 147 24 24 chr2 90277840 90278133 -162978450 - AluSx SINE Alu -19 293 1 848 287 45 8 chr2 90278500 90278967 -162977616 - L1 LINE L1 -1800 4346 3847 2171 170 61 61 chr2 90279282 90279741 -162976842 - MLT1D LTR MaLR -46 459 1 2807 161 6 26 chr2 90280159 90280656 -162975927 - L1MB5 LINE L1 -13 6161 5675 1022 176 1 13 chr2 90280656 90280861 -162975722 - L1M4 LINE L1 -401 5773 5579 26 30 0 0 chr2 90280861 90280894 -162975689 + AT_rich Low_complexity Low_complexity 1 33 0 262 281 31 10 chr2 90280968 90281064 -162975519 - MLT1J LTR MaLR -8 503 406 283 250 69 0 chr2 90281130 90281202 -162975381 - MER81 DNA DNA 0 114 38 739 300 35 16 chr2 90281230 90281487 -162975096 - MLT1J LTR MaLR -247 264 3 561 30 0 0 chr2 90281672 90281739 -162974844 + (TTCC)n Simple_repeat Simple_repeat 4 70 0 977 218 150 18 chr2 90281774 90282100 -162974483 - LTR33 LTR ERVL -2 519 151 1011 194 103 30 chr2 90282467 90282730 -162973853 - AluJo SINE Alu -30 282 1 217 299 134 63 chr2 90283760 90283887 -162972696 - L2 LINE L2 -3 3269 3134 223 227 0 0 chr2 90286568 90286612 -162969971 + CT-rich Low_complexity Low_complexity 2 45 0 33 66 0 0 chr2 90286800 90286861 -162969722 + AT_rich Low_complexity Low_complexity 1 61 0 1775 133 44 7 chr2 90286912 90287211 -162969372 - AluJo SINE Alu 0 309 1 468 288 121 40 chr2 90287444 90287767 -162968816 - MLT1K LTR MaLR -36 552 204 1390 157 46 113 chr2 90289107 90289496 -162967087 + MLT1A1 LTR MaLR 1 363 -2 3413 133 87 18 chr2 90289605 90290155 -162966428 + LTR69 LTR ERVL 1 588 0 377 65 0 0 chr2 90290242 90290288 -162966295 - MLT2B3 LTR ERVL 0 520 475 236 169 117 39 chr2 90290245 90290288 -162966295 + LTR13 LTR ERVK 633 671 -336 * 2191 140 3 60 chr2 90290288 90290381 -162966202 - MER47A DNA MER2_type -1958 365 268 2008 151 13 0 chr2 90290381 90290685 -162965898 + AluSx SINE Alu 1 308 -4 2191 140 3 60 chr2 90290685 90290977 -162965606 - MER47A DNA MER2_type -2055 268 2 236 169 117 39 chr2 90290977 90291010 -162965573 + LTR13 LTR ERVK 671 715 -292 2245 217 79 9 chr2 90291038 90291521 -162965062 - MLT2B3 LTR ERVL -45 505 1 2165 113 0 32 chr2 90291560 90291869 -162964714 + AluSx SINE Alu 14 312 0 331 314 74 11 chr2 90292117 90292292 -162964291 - MIR SINE MIR -30 232 47 1988 101 20 46 chr2 90292708 90293014 -162963569 + AluSx SINE Alu 1 298 -14 23 0 0 0 chr2 90293438 90293461 -162963122 + AT_rich Low_complexity Low_complexity 1 23 0 1177 229 249 1 chr2 90293826 90294497 -162962086 + L2 LINE L2 2459 3294 -19 668 308 65 39 chr2 90294586 90295047 -162961536 + L2 LINE L2 2387 2859 -455 206 258 206 10 chr2 90295513 90295610 -162960973 - L2 LINE L2 -562 2752 2637 314 327 93 0 chr2 90296374 90296524 -162960059 - MIR SINE MIR -89 173 10 286 242 0 0 chr2 90296998 90297060 -162959523 - L1P LINE L1 -1162 4984 4923 398 379 18 26 chr2 90297068 90297295 -162959288 + LTR67 LTR ERVL 4 228 -329 3769 220 56 66 chr2 90297684 90299339 -162957244 + L1MEc LINE L1 470 2360 -4465 616 270 53 22 chr2 90299351 90299577 -162957006 + L1MEc LINE L1 13 245 -6297 417 209 12 0 chr2 90299578 90299664 -162956919 + L1MEc LINE L1 3233 3319 -3325 597 308 168 34 chr2 90299808 90300534 -162956049 - L2 LINE L2 -5 3308 2480 1797 165 16 7 chr2 90301150 90301453 -162955130 + AluSx SINE Alu 1 306 -6 29 0 0 0 chr2 90302580 90302609 -162953974 + AT_rich Low_complexity Low_complexity 1 29 0 1628 161 0 53 chr2 90303726 90304048 -162952535 - AluJo SINE Alu -7 305 1 216 97 0 0 chr2 90304278 90304309 -162952274 + (A)n Simple_repeat Simple_repeat 1 31 0 237 247 39 13 chr2 90305515 90305592 -162950991 - L1MC/D LINE L1 -2007 5801 5723 1740 182 0 16 chr2 90306078 90306385 -162950198 + AluJo SINE Alu 1 302 -10 213 238 0 0 chr2 90307317 90307359 -162949224 + L3 LINE CR1 1504 1545 -32 4041 181 27 3 chr2 90309136 90310091 -162946492 - L1MB7 LINE L1 -175 6078 5101 258 32 0 0 chr2 90310091 90310122 -162946461 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1429 172 21 57 chr2 90310125 90310404 -162946179 - AluJo SINE Alu -31 281 13 7260 191 56 67 chr2 90310414 90310703 -162945880 - L1MB7 LINE L1 -1105 5110 4820 1774 180 7 0 chr2 90310703 90310992 -162945591 - AluJo SINE Alu -21 291 1 7260 191 56 67 chr2 90310992 90311340 -162945243 - L1MB7 LINE L1 -1395 4820 4470 1330 226 6 45 chr2 90311340 90311654 -162944929 - AluJo SINE Alu -9 303 2 7260 191 56 67 chr2 90311654 90312087 -162944496 - L1MB7 LINE L1 -1745 4470 4034 1760 173 24 0 chr2 90312087 90312376 -162944207 - AluJb SINE Alu -16 296 1 7260 191 56 67 chr2 90312376 90313325 -162943258 - L1MB7 LINE L1 -2181 4034 3110 1357 105 0 0 chr2 90313325 90313506 -162943077 - AluSg/x SINE Alu -6 306 126 2634 57 0 0 chr2 90313506 90313822 -162942761 - AluYb8 SINE Alu -2 316 1 3597 242 31 43 chr2 90313823 90315268 -162941315 - L1MB7 LINE L1 -3101 3114 1748 1450 278 51 21 chr2 90315511 90316119 -162940464 + L1 LINE L1 2928 3553 -2593 594 314 70 21 chr2 90316773 90317014 -162939569 + L1MCc LINE L1 21 290 -6133 897 138 0 51 chr2 90317014 90317178 -162939405 + FLAM_C SINE Alu 1 133 0 594 314 70 21 chr2 90317178 90317322 -162939261 + L1MCc LINE L1 290 425 -5998 715 123 58 70 chr2 90317635 90317806 -162938777 - MER96B DNA MER1_type? -1 416 248 827 167 0 0 chr2 90317816 90317948 -162938635 + FLAM_C SINE Alu 12 143 0 430 221 21 0 chr2 90317968 90318063 -162938520 + MER96B DNA MER1_type? 156 252 -165 263 200 20 0 chr2 90318063 90318113 -162938470 - MER96B DNA MER1_type? -366 51 1 476 303 43 5 chr2 90318126 90318314 -162938269 + L1MCc LINE L1 1128 1322 -5101 9465 209 98 48 chr2 90318392 90321343 -162935240 + L1M2 LINE L1 11 3304 -3544 2023 161 0 0 chr2 90321343 90321642 -162934941 + AluJb SINE Alu 1 299 -13 9465 209 98 48 chr2 90321642 90323454 -162933129 + L1M2 LINE L1 3304 5024 -1824 901 160 0 0 chr2 90323477 90323602 -162932981 + FLAM_C SINE Alu 1 125 -8 245 332 21 11 chr2 90323602 90323744 -162932839 + L1MCc LINE L1 2207 2460 -4590 264 224 17 0 chr2 90324691 90324749 -162931834 + L1ME LINE L1 5711 5769 -395 1950 119 3 31 chr2 90324753 90325047 -162931536 + AluSx SINE Alu 1 286 -26 24 53 0 0 chr2 90326687 90326725 -162929858 + GC_rich Low_complexity Low_complexity 1 38 0 753 268 5 19 chr2 90328602 90328811 -162927772 - MIR SINE MIR -50 212 7 212 278 110 72 chr2 90329170 90329379 -162927204 - MIR SINE MIR -17 245 29 310 56 93 37 chr2 90329619 90329673 -162926910 - FLAM_A SINE Alu -13 120 64 273 202 157 11 chr2 90330113 90330202 -162926381 - MIR SINE MIR -65 197 96 308 293 61 10 chr2 90330250 90330349 -162926234 + L2 LINE L2 3209 3312 -1 192 184 0 82 chr2 90331367 90331416 -162925167 - L3 LINE CR1 -250 1327 1283 2017 130 0 23 chr2 90331538 90331838 -162924745 + AluSx SINE Alu 1 293 -19 1866 180 0 0 chr2 90331935 90332230 -162924353 - AluJb SINE Alu -17 295 1 339 147 59 0 chr2 90332842 90332910 -162923673 + Charlie4 DNA MER1_type 1833 1904 -57 214 273 184 47 chr2 90333496 90333774 -162922809 - L2 LINE L2 0 3313 2998 190 292 97 35 chr2 90335168 90335281 -162921302 + MIR3 SINE MIR 35 154 -54 720 258 41 27 chr2 90335304 90335525 -162921058 + Charlie8 DNA MER1_type 1 224 -2193 1945 195 101 2 chr2 90336402 90336797 -162919786 - Tigger2a DNA MER2_type 0 434 1 272 244 0 39 chr2 90337009 90337062 -162919521 + (CATA)n Simple_repeat Simple_repeat 2 53 -23 2762 193 88 26 chr2 90337062 90337673 -162918910 - MER82 DNA MER2_type -4 649 1 272 244 0 39 chr2 90337673 90337697 -162918886 + (CATA)n Simple_repeat Simple_repeat 53 76 0 21 0 0 0 chr2 90339723 90339744 -162916839 + AT_rich Low_complexity Low_complexity 1 21 0 1239 118 269 37 chr2 90340408 90340653 -162915930 - AluSx SINE Alu 0 302 1 31 58 0 0 chr2 90340662 90340714 -162915869 + AT_rich Low_complexity Low_complexity 1 52 0 1896 140 6 34 chr2 90340781 90341102 -162915481 + AluJo SINE Alu 1 312 0 189 0 0 0 chr2 90341535 90341556 -162915027 + (T)n Simple_repeat Simple_repeat 1 21 0 31 44 0 0 chr2 90342201 90342246 -162914337 + GC_rich Low_complexity Low_complexity 1 45 0 311 294 0 22 chr2 90342362 90342454 -162914129 + L1MC4 LINE L1 6614 6703 -1339 300 186 0 0 chr2 90342455 90342514 -162914069 + (TA)n Simple_repeat Simple_repeat 2 60 0 207 69 0 0 chr2 90344244 90344273 -162912310 + (TATG)n Simple_repeat Simple_repeat 2 30 0 1515 166 79 32 chr2 90344280 90344557 -162912026 - AluJo SINE Alu -10 292 3 1608 201 3 16 chr2 90344576 90344879 -162911704 + AluJb SINE Alu 1 299 -13 2220 99 0 3 chr2 90345498 90345792 -162910791 + AluSx SINE Alu 5 297 -15 369 0 0 0 chr2 90345815 90345856 -162910727 + (TG)n Simple_repeat Simple_repeat 2 42 0 403 182 64 9 chr2 90347212 90347322 -162909261 - MER113 DNA MER1_type? -327 194 79 381 310 35 27 chr2 90350472 90350622 -162905961 + MIR SINE MIR 3 152 -66 291 340 0 19 chr2 90352040 90352146 -162904437 - MIR SINE MIR -105 157 54 1382 122 0 63 chr2 90352347 90352585 -162903998 - AluSg/x SINE Alu -8 304 82 476 245 236 9 chr2 90352639 90352851 -162903732 + L1M4 LINE L1 4072 4331 -1815 243 288 12 12 chr2 90354592 90354672 -162901911 + Charlie8 DNA MER1_type 94 173 -2244 282 336 118 11 chr2 90357058 90357329 -162899254 - L1ME4a LINE L1 -83 6038 5739 388 252 7 93 chr2 90358603 90358754 -162897829 - MIR3 SINE MIR -56 152 15 262 95 0 48 chr2 90359215 90359257 -162897326 - L1ME3 LINE L1 -211 5951 5912 376 280 95 86 chr2 90360079 90360322 -162896261 - L1MEd LINE L1 -5809 310 66 183 319 80 44 chr2 90362623 90362736 -162893847 + MIR SINE MIR 18 134 -74 628 157 0 20 chr2 90364189 90364291 -162892292 - MER2 DNA MER2_type -240 105 6 1685 213 41 37 chr2 90364296 90364804 -162891779 - L1M4 LINE L1 -1302 4844 4335 432 164 68 0 chr2 90364804 90364877 -162891706 - Tigger5 DNA MER2_type -1 2322 2245 256 162 0 0 chr2 90364953 90364990 -162891593 - Tigger5 DNA MER2_type -2286 37 1 1046 214 36 62 chr2 90364990 90365265 -162891318 - L1M4 LINE L1 -1809 4337 4070 761 286 69 45 chr2 90365293 90365671 -162890912 + MLT1J1 LTR MaLR 55 441 -5 683 294 15 52 chr2 90365844 90366113 -162890470 + L1MEc LINE L1 34 292 -6104 * 1872 248 97 41 chr2 90366106 90366721 -162889862 - L1ME3 LINE L1 -299 5863 5284 2261 131 0 0 chr2 90366721 90367027 -162889556 - AluSx SINE Alu -4 308 3 1872 248 97 41 chr2 90367027 90367236 -162889347 - L1ME3 LINE L1 -878 5284 5088 2130 106 14 3 chr2 90367236 90367529 -162889054 - AluSx SINE Alu -14 298 3 1872 248 97 41 chr2 90367529 90367597 -162888986 - L1ME3 LINE L1 -1074 5088 5025 2476 82 0 0 chr2 90367597 90367901 -162888682 - AluSg SINE Alu -6 304 1 1872 248 97 41 chr2 90367901 90368470 -162888113 - L1ME3 LINE L1 -1137 5025 4324 396 0 0 0 chr2 90368470 90368514 -162888069 + (TA)n Simple_repeat Simple_repeat 1 44 0 1872 248 97 41 chr2 90368514 90368526 -162888057 - L1ME3 LINE L1 -1838 4324 4314 1068 210 39 39 chr2 90368525 90368859 -162887724 - L1M4 LINE L1 -1545 4601 4268 * 2528 63 0 13 chr2 90369337 90369652 -162886931 + AluY SINE Alu 1 311 0 733 291 112 26 chr2 90370666 90371164 -162885419 + L1ME4a LINE L1 5581 6121 0 2211 100 17 3 chr2 90371574 90371874 -162884709 - AluSc SINE Alu -5 304 1 326 253 53 11 chr2 90371874 90371969 -162884614 + MIR SINE MIR 118 216 -46 3466 238 113 116 chr2 90372318 90372337 -162884246 - HAL1 LINE L1 -59 2448 2430 1705 134 7 41 chr2 90372337 90372651 -162883932 + AluJo SINE Alu 1 304 0 3466 238 113 116 chr2 90372651 90374038 -162882545 - HAL1 LINE L1 -77 2430 1048 1648 183 0 14 chr2 90374038 90374327 -162882256 - AluJo SINE Alu -17 295 11 3466 238 113 116 chr2 90374327 90375126 -162881457 - HAL1 LINE L1 -1459 1048 248 333 319 109 0 chr2 90375170 90375289 -162881294 + MLT1J1 LTR MaLR 44 175 -271 192 152 0 0 chr2 90375461 90375494 -162881089 + (CATA)n Simple_repeat Simple_repeat 4 36 0 2459 74 0 3 chr2 90375886 90376185 -162880398 + AluY SINE Alu 1 298 -13 2301 111 0 9 chr2 90377268 90377583 -162879000 + AluSx SINE Alu 1 312 0 1970 209 167 109 chr2 90377798 90378698 -162877885 - MER45C DNA AcHobo 0 953 2 392 274 29 0 chr2 90378894 90378996 -162877587 + MIR SINE MIR 127 231 -31 2289 103 3 0 chr2 90378997 90379299 -162877284 - AluSg SINE Alu -7 303 1 315 104 0 0 chr2 90379323 90379371 -162877212 + (CA)n Simple_repeat Simple_repeat 2 49 0 1951 138 17 0 chr2 90379808 90380099 -162876484 + AluSx SINE Alu 1 296 -16 21 0 0 0 chr2 90380152 90380173 -162876410 + AT_rich Low_complexity Low_complexity 1 21 0 307 227 41 0 chr2 90380180 90380277 -162876306 - L1ME4a LINE L1 -6 6115 6015 247 244 91 45 chr2 90380332 90380508 -162876075 - L1P4 LINE L1 -663 5511 5328 1660 159 0 63 chr2 90380519 90380850 -162875733 - AluJo SINE Alu 0 312 1 25 31 0 0 chr2 90381199 90381231 -162875352 + AT_rich Low_complexity Low_complexity 1 32 0 847 156 0 28 chr2 90381236 90381377 -162875206 + FLAM_A SINE Alu 6 142 0 1781 170 28 0 chr2 90381793 90382075 -162874508 + AluJb SINE Alu 1 290 -22 1423 198 32 0 chr2 90381842 90382090 -162874493 + AluJb SINE Alu 50 305 -7 648 97 0 0 chr2 90382080 90382173 -162874410 + (GGGGA)n Simple_repeat Simple_repeat 4 96 0 * 710 223 48 6 chr2 90382194 90382360 -162874223 + MLT1I LTR MaLR 1 173 -236 237 132 0 0 chr2 90382381 90382419 -162874164 + L1MA10 LINE L1 6283 6320 -14 200 280 10 30 chr2 90382405 90382505 -162874078 + (TA)n Simple_repeat Simple_repeat 1 98 0 * 2663 214 28 41 chr2 90382510 90382540 -162874043 - L1ME1 LINE L1 -26 6140 6111 2377 93 0 3 chr2 90382540 90382842 -162873741 - AluSq SINE Alu -12 301 1 2663 214 28 41 chr2 90382842 90383588 -162872995 - L1ME1 LINE L1 -55 6111 5374 8318 224 62 23 chr2 90383594 90385470 -162871113 - L1ME1 LINE L1 -1053 5093 3077 1962 133 44 0 chr2 90385470 90385763 -162870820 - AluSq SINE Alu -7 306 1 8318 224 62 23 chr2 90385763 90386609 -162869974 - L1ME1 LINE L1 -3069 3077 2265 4060 182 47 67 chr2 90386603 90386722 -162869861 - L1MC4a LINE L1 -511 7297 7177 * 1823 174 3 10 chr2 90386722 90387033 -162869550 - AluSx SINE Alu -3 309 1 794 151 8 0 chr2 90387042 90387168 -162869415 - FLAM_A SINE Alu -3 130 4 4060 182 47 67 chr2 90387168 90388193 -162868390 - L1MC4a LINE L1 -639 7169 6166 1283 153 111 91 chr2 90388210 90388343 -162868240 - L1MB7 LINE L1 -20 6164 6035 2741 84 32 63 chr2 90388343 90388738 -162867845 + MSTA LTR MaLR 1 382 -46 2146 99 58 0 chr2 90388738 90389030 -162867553 - AluSc SINE Alu 0 309 1 2741 84 32 63 chr2 90389030 90389076 -162867507 + MSTA LTR MaLR 382 428 0 1283 153 111 91 chr2 90389076 90389340 -162867243 - L1MB7 LINE L1 -149 6035 5759 905 211 72 15 chr2 90389333 90389598 -162866985 - L1MC4a LINE L1 -1637 6171 5892 * 238 365 134 57 chr2 90389809 90390160 -162866423 - L2 LINE L2 -78 3194 2817 376 288 154 46 chr2 90390313 90390553 -162866030 + L2 LINE L2 2711 2976 -338 1421 228 84 35 chr2 90390576 90391112 -162865471 + MLT1F1 LTR MaLR 6 567 0 670 225 73 83 chr2 90391112 90391414 -162865169 + L2 LINE L2 2986 3284 -29 290 225 14 14 chr2 90391595 90391666 -162864917 - MIR SINE MIR -102 106 36 25 0 0 0 chr2 90391689 90391714 -162864869 + AT_rich Low_complexity Low_complexity 1 25 0 2279 91 0 0 chr2 90392374 90392659 -162863924 - AluSq SINE Alu -28 285 1 243 324 35 29 chr2 90393282 90393452 -162863131 - MARNA DNA Mariner -228 358 188 4844 241 48 37 chr2 90393837 90395239 -162861344 + L1MEc LINE L1 199 1625 -4771 973 172 54 5 chr2 90395239 90395443 -162861140 + L1MB7 LINE L1 5952 6165 -19 4844 241 48 37 chr2 90395443 90395762 -162860821 + L1MEc LINE L1 1625 1939 -4457 834 224 136 78 chr2 90395768 90395963 -162860620 + L1MEc LINE L1 3365 3547 -2668 1803 144 0 32 chr2 90395963 90396248 -162860335 + AluJo SINE Alu 12 287 -25 834 224 136 78 chr2 90396248 90396516 -162860067 + L1MEc LINE L1 3547 3855 -2360 1280 160 72 44 chr2 90396516 90396766 -162859817 + AluJo SINE Alu 39 295 -17 4287 218 80 42 chr2 90396766 90397529 -162859054 + L1MEc LINE L1 3848 4580 -1655 2354 75 10 3 chr2 90397529 90397822 -162858761 - AluSq SINE Alu -18 295 1 4287 218 80 42 chr2 90397822 90398437 -162858146 + L1MEc LINE L1 4580 5170 -1065 2005 139 11 0 chr2 90398437 90398745 -162857838 + AluSx SINE Alu 1 311 0 4287 218 80 42 chr2 90398745 90399217 -162857366 + L1MEc LINE L1 5170 5777 -458 548 172 0 0 chr2 90399225 90399324 -162857259 + MER45 DNA AcHobo 1478 1576 -5 254 361 10 21 chr2 90399585 90399682 -162856901 + MIR SINE MIR 16 111 -151 41251 31 21 1 chr2 90400061 90406091 -162850492 - L1HS LINE L1 -1 6154 2 895 244 138 19 chr2 90406119 90406438 -162850145 - LTR18A LTR ERVL 0 357 1 232 257 14 0 chr2 90406440 90406510 -162850073 - MIR SINE MIR -60 202 132 314 289 39 29 chr2 90406567 90406671 -162849912 + MIR SINE MIR 143 247 -15 359 264 55 51 chr2 90407480 90407715 -162848868 - L1ME LINE L1 -327 5794 5559 393 22 0 0 chr2 90408047 90408093 -162848490 + (TCTA)n Simple_repeat Simple_repeat 2 47 0 616 228 0 0 chr2 90408101 90408215 -162848368 - FLAM_A SINE Alu -19 114 1 1862 126 0 0 chr2 90408233 90408480 -162848103 - AluSx SINE Alu -47 265 19 36818 80 7 9 chr2 90408514 90414669 -162841914 + L1PA6 LINE L1 11 6151 -3 214 176 191 0 chr2 90415473 90415541 -162841042 + L3 LINE CR1 1212 1292 -285 1133 53 0 0 chr2 90415541 90415701 -162840882 - AluSp/q SINE Alu 0 318 159 2056 135 7 3 chr2 90415901 90416204 -162840379 + AluSx SINE Alu 1 304 -8 333 294 10 0 chr2 90416204 90416306 -162840277 + MLT1K LTR MaLR 147 249 -339 989 195 0 6 chr2 90417095 90417269 -162839314 - FRAM SINE Alu -3 173 1 202 364 30 20 chr2 90417676 90417775 -162838808 - L2 LINE L2 -499 2815 2716 1025 193 11 0 chr2 90418056 90418232 -162838351 - MER45A DNA AcHobo 0 178 1 302 232 38 0 chr2 90418429 90418522 -162838061 - LTR16C LTR ERVL -2 489 353 709 189 170 0 chr2 90418679 90418838 -162837745 - MER5A DNA MER1_type 0 189 4 264 260 99 68 chr2 90419225 90419417 -162837166 - L2 LINE L2 -825 2489 2292 2412 96 0 0 chr2 90419526 90419838 -162836745 + AluSq SINE Alu 1 312 -1 820 259 44 31 chr2 90420660 90421066 -162835517 + MLT1H LTR MaLR 86 549 0 21 0 0 0 chr2 90421106 90421127 -162835456 + AT_rich Low_complexity Low_complexity 1 21 0 316 307 33 26 chr2 90421173 90421443 -162835140 - L1ME LINE L1 -322 5799 5528 2084 106 7 3 chr2 90421503 90421785 -162834798 - AluSq SINE Alu -30 283 1 2037 152 28 19 chr2 90421812 90422174 -162834409 + MLT1A1 LTR MaLR 1 365 0 1294 237 13 24 chr2 90422253 90422633 -162833950 - L1ME3 LINE L1 -70 6092 5717 425 338 113 34 chr2 90422733 90423416 -162833167 - L2 LINE L2 -443 2871 2135 1155 147 27 45 chr2 90423599 90423823 -162832760 - AluJo SINE Alu -7 305 86 231 277 136 23 chr2 90423844 90424021 -162832562 - L2 LINE L2 -1607 1707 1511 358 266 135 36 chr2 90424420 90424612 -162831971 - L1MC4a LINE L1 -1892 5916 5706 198 0 0 0 chr2 90424648 90424670 -162831913 + (TTCC)n Simple_repeat Simple_repeat 3 24 0 2270 116 0 0 chr2 90424672 90424973 -162831610 - AluY SINE Alu -10 301 1 1187 191 30 103 chr2 90424987 90425454 -162831129 - L1M4 LINE L1 -3448 2698 2266 1921 215 86 66 chr2 90425456 90426186 -162830397 - LTR1B LTR ERV1 -81 745 1 422 175 0 0 chr2 90426186 90426266 -162830317 + AluJ/FRAM SINE Alu 232 311 -1 515 216 18 76 chr2 90426290 90426365 -162830218 - Charlie7 DNA MER1_type -530 2082 2004 1964 141 3 3 chr2 90426365 90426662 -162829921 - AluSx SINE Alu -15 297 1 515 216 18 76 chr2 90426662 90426757 -162829826 - Charlie7 DNA MER1_type -608 2004 1922 21 0 0 0 chr2 90426787 90426808 -162829775 + AT_rich Low_complexity Low_complexity 1 21 0 551 179 0 80 chr2 90426818 90426969 -162829614 - L1MC2 LINE L1 -1 6343 6205 7680 199 64 81 chr2 90427015 90427913 -162828670 - L1MCa LINE L1 -1109 5317 4405 2233 99 0 3 chr2 90427913 90428205 -162828378 - AluSx SINE Alu -21 291 1 7680 199 64 81 chr2 90428205 90428524 -162828059 - L1MCa LINE L1 -2021 4405 4082 273 81 0 0 chr2 90428524 90428561 -162828022 + U2 snRNA snRNA 1 37 -151 7680 199 64 81 chr2 90428561 90429332 -162827251 - L1MCa LINE L1 -2344 4082 3299 2200 92 16 16 chr2 90429332 90429500 -162827083 - AluSp SINE Alu -7 306 136 2075 112 0 10 chr2 90429500 90429795 -162826788 - AluSg SINE Alu -18 292 1 2200 92 16 16 chr2 90429795 90429932 -162826651 - AluSp SINE Alu -176 137 1 7680 199 64 81 chr2 90429932 90431233 -162825350 - L1MCa LINE L1 -3127 3299 2053 1803 176 120 129 chr2 90431243 90431459 -162825124 + Charlie6 DNA MER1_type 506 722 -2778 441 0 0 0 chr2 90431459 90431508 -162825075 + (TTTA)n Simple_repeat Simple_repeat 2 50 0 1679 183 14 4 chr2 90431510 90431789 -162824794 - AluJo SINE Alu -30 282 1 1803 176 120 129 chr2 90431789 90432399 -162824184 + Charlie6 DNA MER1_type 723 1337 -2163 992 175 7 0 chr2 90432399 90432553 -162824030 - AluJo/FRAM SINE Alu -11 291 137 1152 105 7 0 chr2 90432405 90432558 -162824025 - AluSg/x SINE Alu -27 283 130 * 1803 176 120 129 chr2 90432553 90432659 -162823924 + Charlie6 DNA MER1_type 1337 1442 -2058 2383 75 10 0 chr2 90432659 90432964 -162823619 - AluSx SINE Alu -4 308 1 1803 176 120 129 chr2 90432964 90433214 -162823369 + Charlie6 DNA MER1_type 1442 1676 -1824 646 221 31 0 chr2 90433211 90433338 -162823245 + Charlie6 DNA MER1_type 2254 2384 -1116 * 2166 100 3 3 chr2 90433338 90433627 -162822956 - AluSp SINE Alu -19 294 6 1040 209 9 22 chr2 90433663 90433888 -162822695 - AluJo SINE Alu -9 303 82 2174 165 91 40 chr2 90433929 90434116 -162822467 + Charlie6 DNA MER1_type 2500 2676 -824 2557 159 47 2 chr2 90434116 90434524 -162822059 - MSTB LTR MaLR 0 426 1 2174 165 91 40 chr2 90434524 90435220 -162821363 + Charlie6 DNA MER1_type 2676 3489 -11 392 221 97 9 chr2 90435236 90435349 -162821234 - Charlie7 DNA MER1_type -1062 1550 1428 44 70 0 0 chr2 90435403 90435489 -162821094 + AT_rich Low_complexity Low_complexity 1 86 0 1694 175 3 48 chr2 90435495 90435804 -162820779 - AluJb SINE Alu -17 295 1 365 268 12 0 chr2 90435805 90435887 -162820696 - Charlie7 DNA MER1_type -2529 83 1 4200 244 31 27 chr2 90435911 90437058 -162819525 + L1ME1 LINE L1 2617 3758 -2388 2180 126 0 10 chr2 90437058 90437368 -162819215 + AluSg SINE Alu 1 307 -3 4200 244 31 27 chr2 90437368 90437442 -162819141 + L1ME1 LINE L1 3758 3830 -2316 1565 189 6 35 chr2 90437442 90437759 -162818824 + AluJb SINE Alu 1 308 -4 4200 244 31 27 chr2 90437759 90437864 -162818719 + L1ME1 LINE L1 3830 3949 -2197 198 103 0 0 chr2 90438509 90438538 -162818045 + (CAA)n Simple_repeat Simple_repeat 2 30 0 261 0 0 0 chr2 90439242 90439271 -162817312 + (CA)n Simple_repeat Simple_repeat 1 29 0 192 238 24 0 chr2 90439336 90439378 -162817205 - L2 LINE L2 -16 3256 3214 416 302 89 6 chr2 90439478 90439647 -162816936 - MIR SINE MIR 0 262 80 1143 137 0 0 chr2 90439916 90440077 -162816506 + AluSg/x SINE Alu 130 290 -22 4795 192 60 47 chr2 90440178 90441453 -162815130 + L1ME1 LINE L1 4020 5311 -855 2365 91 0 10 chr2 90441453 90441761 -162814822 + AluY SINE Alu 2 306 -5 4795 192 60 47 chr2 90441761 90442079 -162814504 + L1ME1 LINE L1 5311 5623 -543 2858 139 81 39 chr2 90442080 90442669 -162813914 + LTR10A LTR ERV1 1 626 -7 2060 232 11 31 chr2 90442669 90443208 -162813375 + L1ME1 LINE L1 5634 6161 -5 1827 147 13 13 chr2 90443704 90443865 -162812718 - AluJb SINE Alu -13 299 136 2456 98 0 0 chr2 90443865 90444172 -162812411 - AluSc SINE Alu -2 307 1 1827 147 13 13 chr2 90444172 90444309 -162812274 - AluJb SINE Alu -175 137 1 734 76 0 0 chr2 90444336 90444428 -162812155 + AluSq SINE Alu 2 93 -220 950 109 0 0 chr2 90444428 90444556 -162812027 + AluSp/q SINE Alu 166 293 -20 226 266 94 0 chr2 90444679 90444743 -162811840 - MIR SINE MIR -116 146 77 698 182 38 0 chr2 90445928 90446060 -162810523 + MLT1F1 LTR MaLR 431 567 0 2257 77 10 13 chr2 90446338 90446637 -162809946 + AluSx SINE Alu 1 298 -14 2173 111 0 3 chr2 90446703 90447001 -162809582 - AluSx SINE Alu -14 298 2 1827 175 3 0 chr2 90447179 90447471 -162809112 - AluJb SINE Alu -18 294 2 2045 113 21 11 chr2 90448247 90448531 -162808052 + AluSq SINE Alu 1 287 -26 543 53 0 0 chr2 90448531 90448606 -162807977 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 1960 125 7 4 chr2 90448922 90449201 -162807382 + AluSx SINE Alu 12 291 -21 1959 159 10 0 chr2 90449208 90449517 -162807066 + AluJb SINE Alu 1 312 0 754 272 37 8 chr2 90450446 90450691 -162805892 + Charlie2a DNA MER1_type 1716 1967 -895 2599 165 45 2 chr2 90450691 90451139 -162805444 + MLT1C LTR MaLR 1 467 0 271 95 0 0 chr2 90451140 90451182 -162805401 + Charlie2a DNA MER1_type 1964 2005 -857 398 232 9 0 chr2 90451186 90451298 -162805285 + CT-rich Low_complexity Low_complexity 2 114 0 1599 136 72 15 chr2 90451300 90451565 -162805018 - AluJb SINE Alu -30 282 3 1577 228 91 84 chr2 90451594 90451847 -162804736 + Charlie2a DNA MER1_type 2030 2280 -582 521 128 85 0 chr2 90451847 90451941 -162804642 - L1MD2 LINE L1 -3 6356 6255 2121 127 10 7 chr2 90451951 90452258 -162804325 - AluSq SINE Alu -5 308 1 1577 228 91 84 chr2 90452258 90452520 -162804063 + Charlie2a DNA MER1_type 2288 2547 -315 1993 151 0 16 chr2 90452520 90452831 -162803752 - AluSx SINE Alu -6 306 1 1577 228 91 84 chr2 90452831 90453076 -162803507 + Charlie2a DNA MER1_type 2547 2807 -55 530 167 0 0 chr2 90453080 90453164 -162803419 + L1M3 LINE L1 5698 5781 -390 * 2266 233 42 39 chr2 90453163 90453471 -162803112 + L1MA9 LINE L1 5620 5926 -386 2149 124 10 0 chr2 90453471 90453769 -162802814 - AluSx SINE Alu -11 301 1 2266 233 42 39 chr2 90453769 90454121 -162802462 + L1MA9 LINE L1 5926 6282 -30 2505 114 33 5 chr2 90454125 90454521 -162802062 + L1MB3 LINE L1 5769 6175 -8 790 146 6 95 chr2 90454536 90454694 -162801889 - FRAM SINE Alu -21 155 12 2305 127 0 0 chr2 90454715 90455023 -162801560 - AluSx SINE Alu -4 308 1 559 289 52 63 chr2 90455117 90455560 -162801023 - L1ME LINE L1 -387 5775 5338 186 43 0 0 chr2 90455778 90455801 -162800782 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 216 200 0 0 chr2 90455836 90455881 -162800702 + CT-rich Low_complexity Low_complexity 2 46 0 724 140 0 0 chr2 90456519 90456633 -162799950 + FLAM_C SINE Alu 1 114 -19 180 0 0 0 chr2 90456921 90456941 -162799642 + (TTTTTG)n Simple_repeat Simple_repeat 1 20 0 228 35 0 0 chr2 90457067 90457096 -162799487 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 1007 146 6 12 chr2 90457101 90457272 -162799311 + AluJb SINE Alu 142 311 -1 2428 48 10 0 chr2 90458359 90458652 -162797931 - AluY SINE Alu -15 296 1 495 221 233 18 chr2 90459101 90459264 -162797319 + MIR SINE MIR 25 222 -40 305 309 99 22 chr2 90459751 90459932 -162796651 - MIR3 SINE MIR -7 201 7 298 293 129 14 chr2 90460543 90460683 -162795900 - L1ME4a LINE L1 -15 6106 5951 383 263 216 0 chr2 90460754 90460925 -162795658 - L1ME4a LINE L1 -295 5826 5619 449 231 19 10 chr2 90461063 90461167 -162795416 - L1ME3A LINE L1 -7 6163 6059 784 256 73 26 chr2 90462478 90462522 -162794061 + MIR SINE MIR 7 47 -215 1545 178 52 7 chr2 90462522 90462808 -162793775 + AluJo SINE Alu 2 300 -12 784 256 73 26 chr2 90462808 90462997 -162793586 + MIR SINE MIR 47 251 -11 418 293 26 0 chr2 90463567 90463683 -162792900 - MIR SINE MIR -67 195 77 2002 139 0 3 chr2 90464363 90464658 -162791925 - AluSx SINE Alu -18 294 1 608 147 20 0 chr2 90466275 90466377 -162790206 - MER5A DNA MER1_type -77 112 9 2072 107 13 10 chr2 90466839 90467137 -162789446 + AluSx SINE Alu 1 299 -13 21 0 0 0 chr2 90467475 90467496 -162789087 + AT_rich Low_complexity Low_complexity 1 21 0 30 77 0 0 chr2 90468484 90468549 -162788034 + GC_rich Low_complexity Low_complexity 1 65 0 189 0 0 0 chr2 90470477 90470498 -162786085 + (A)n Simple_repeat Simple_repeat 1 21 0 1702 162 61 0 chr2 90472860 90473138 -162783445 + AluSx SINE Alu 1 295 -17 793 216 152 44 chr2 90473159 90473254 -162783329 + L1MC4a LINE L1 5593 5676 -2132 2389 85 0 19 chr2 90473254 90473570 -162783013 - AluY SINE Alu -1 310 1 793 216 152 44 chr2 90473570 90473789 -162782794 + L1MC4a LINE L1 5676 5941 -1867 210 349 111 8 chr2 90474944 90475070 -162781513 - MIR SINE MIR -18 244 106 339 273 64 9 chr2 90476383 90476493 -162780090 + MER5C DNA MER1_type 1 116 -208 1620 174 27 27 chr2 90476500 90476794 -162779789 + AluJb SINE Alu 9 302 -10 1010 258 139 16 chr2 90476927 90477295 -162779288 + LTR16A LTR ERVL 25 437 -13 338 181 60 48 chr2 90477376 90477459 -162779124 + L2 LINE L2 3189 3272 0 2326 196 65 45 chr2 90477488 90478105 -162778478 - Charlie1a DNA MER1_type 0 1455 827 757 160 13 67 chr2 90478158 90478308 -162778275 + FLAM_A SINE Alu 1 142 0 2141 106 7 0 chr2 90478380 90478673 -162777910 + AluSx SINE Alu 6 300 -12 980 214 42 9 chr2 90478680 90478895 -162777688 - Charlie1a DNA MER1_type -963 492 271 783 184 0 8 chr2 90478906 90479031 -162777552 - FLAM_C SINE Alu -18 125 2 815 218 22 34 chr2 90479031 90479046 -162777537 - Charlie1a DNA MER1_type -2478 283 269 1998 120 10 3 chr2 90479046 90479337 -162777246 - AluSg SINE Alu 0 310 18 815 218 22 34 chr2 90479337 90479500 -162777083 - Charlie1a DNA MER1_type -2492 269 107 764 171 16 78 chr2 90480750 90480943 -162775640 - Charlie2a DNA MER1_type -1215 1647 1467 2455 70 0 0 chr2 90481062 90481362 -162775221 - AluY SINE Alu -11 300 1 241 83 28 0 chr2 90481387 90481423 -162775160 - Charlie2a DNA MER1_type -2198 584 548 721 285 41 47 chr2 90481449 90481768 -162774815 - Charlie2a DNA MER1_type -2465 317 1 226 184 0 20 chr2 90481901 90481950 -162774633 + (TA)n Simple_repeat Simple_repeat 1 48 0 928 189 38 93 chr2 90481976 90482015 -162774568 + L1M4 LINE L1 2266 2306 -3840 2215 128 3 0 chr2 90482015 90482320 -162774263 + AluSx SINE Alu 1 306 -6 928 189 38 93 chr2 90482320 90482362 -162774221 + L1M4 LINE L1 2306 2349 -3797 2479 79 3 0 chr2 90482362 90482666 -162773917 + AluSp SINE Alu 1 305 -8 928 189 38 93 chr2 90482666 90482896 -162773687 + L1M4 LINE L1 2349 2561 -3585 3431 136 2 6 chr2 90483725 90484224 -162772359 - LOR1a LTR ERV1 0 497 1 449 280 87 30 chr2 90484400 90484729 -162771854 - L1MEd LINE L1 -1071 1419 974 350 307 117 68 chr2 90485591 90486269 -162770314 - L2 LINE L2 -5 3267 2551 311 320 178 3 chr2 90487541 90487844 -162768739 + L1MC4a LINE L1 5694 6049 -1759 25 0 0 0 chr2 90488006 90488031 -162768552 + AT_rich Low_complexity Low_complexity 1 25 0 1762 140 3 14 chr2 90488051 90488337 -162768246 + AluJb SINE Alu 11 293 -19 598 152 0 20 chr2 90488683 90488782 -162767801 + FLAM_A SINE Alu 20 116 -26 23 0 0 0 chr2 90488782 90488805 -162767778 + AT_rich Low_complexity Low_complexity 1 23 0 180 196 20 20 chr2 90488980 90489031 -162767552 - L2 LINE L2 -345 2968 2918 27 0 0 0 chr2 90490090 90490117 -162766466 + GC_rich Low_complexity Low_complexity 1 27 0 25 0 0 0 chr2 90490490 90490515 -162766068 + AT_rich Low_complexity Low_complexity 1 25 0 1460 223 69 48 chr2 90490515 90490951 -162765632 - MLT1D LTR MaLR -60 445 1 2472 140 125 32 chr2 90491425 90491889 -162764694 + LTR22 LTR ERVK 1 507 -2 309 263 126 120 chr2 90492096 90492446 -162764137 + L2 LINE L2 2330 2681 -633 240 324 14 14 chr2 90493462 90493533 -162763050 - L2 LINE L2 0 3272 3202 2810 194 15 29 chr2 90493971 90494493 -162762090 + MLT2B2 LTR ERVL 1 515 0 484 72 0 29 chr2 90494907 90494976 -162761607 - MSTA LTR MaLR 0 428 362 2213 93 13 3 chr2 90494976 90495278 -162761305 + AluSc SINE Alu 1 305 -4 191 59 0 29 chr2 90495663 90495697 -162760886 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 696 293 115 27 chr2 90495698 90496186 -162760397 - L1ME4a LINE L1 -10 6111 5581 2525 64 0 13 chr2 90497191 90497504 -162759079 - AluY SINE Alu -2 309 1 315 276 142 71 chr2 90498226 90498700 -162757883 + L1M2 LINE L1 759 1404 -5445 281 241 213 46 chr2 90501279 90501387 -162755196 + L2 LINE L2 3186 3311 -2 24 77 0 0 chr2 90502347 90502399 -162754184 + AT_rich Low_complexity Low_complexity 1 52 0 464 250 10 29 chr2 90502546 90502650 -162753933 - MIR SINE MIR -84 124 23 594 284 31 22 chr2 90503568 90503790 -162752793 - L2 LINE L2 -8 3305 3082 2063 104 104 0 chr2 90504388 90504695 -162751888 - MER44D DNA MER2_type 0 609 1 308 286 14 0 chr2 90506106 90506176 -162750407 - L2 LINE L2 -13 3259 3189 265 82 41 0 chr2 90506472 90506521 -162750062 + (TA)n Simple_repeat Simple_repeat 1 51 0 22 0 0 0 chr2 90507317 90507339 -162749244 + AT_rich Low_complexity Low_complexity 1 22 0 2228 122 0 3 chr2 90507396 90507700 -162748883 - AluSx SINE Alu -9 303 1 804 184 13 13 chr2 90507930 90508082 -162748501 + FRAM SINE Alu 4 155 -21 1837 157 0 0 chr2 90508768 90509042 -162747541 - AluSx SINE Alu -38 274 1 188 167 21 0 chr2 90510047 90510095 -162746488 + CT-rich Low_complexity Low_complexity 2 50 0 1324 157 0 26 chr2 90510815 90511045 -162745538 - AluJo SINE Alu -5 307 84 2330 140 73 58 chr2 90512296 90512342 -162744241 - MSTB2 LTR MaLR 0 457 413 2332 78 3 3 chr2 90512342 90512635 -162743948 + AluSq SINE Alu 9 301 -12 2330 140 73 58 chr2 90512635 90513038 -162743545 - MSTB2 LTR MaLR -44 413 1 2295 118 0 0 chr2 90513509 90513815 -162742768 - AluSx SINE Alu -6 306 1 1217 148 0 66 chr2 90515022 90515265 -162741318 + AluJo SINE Alu 86 312 0 2376 97 3 0 chr2 90515328 90515636 -162740947 - AluSg SINE Alu -1 309 1 1765 233 123 100 chr2 90518926 90519052 -162737531 - L1MC4 LINE L1 -6 8036 7914 2030 85 78 0 chr2 90519052 90519335 -162737248 - AluY SINE Alu -6 305 1 1765 233 123 100 chr2 90519335 90519648 -162736935 - L1MC4 LINE L1 -128 7914 7610 2316 87 10 0 chr2 90519648 90519958 -162736625 - AluSp SINE Alu 0 313 1 1765 233 123 100 chr2 90519958 90520012 -162736571 - L1MC4 LINE L1 -432 7610 7559 2210 117 0 13 chr2 90520012 90520328 -162736255 - AluSx SINE Alu 0 312 1 476 46 58 11 chr2 90520330 90520417 -162736166 + T-rich Low_complexity Low_complexity 4 94 0 1478 123 119 12 chr2 90520417 90520561 -162736022 - AluJo SINE Alu -30 282 155 229 25 0 50 chr2 90520561 90520601 -162735982 + (TTTTG)n Simple_repeat Simple_repeat 4 41 0 1478 123 119 12 chr2 90520601 90520700 -162735883 - AluJo SINE Alu -157 155 13 1765 233 123 100 chr2 90520700 90521077 -162735506 - L1MC4 LINE L1 -483 7559 7192 1483 131 142 11 chr2 90521077 90521337 -162735246 - AluJb SINE Alu -18 294 1 1765 233 123 100 chr2 90521337 90521651 -162734932 - L1MC4 LINE L1 -850 7192 6817 21 36 0 0 chr2 90521910 90521938 -162734645 + AT_rich Low_complexity Low_complexity 1 28 0 204 293 37 12 chr2 90522015 90522097 -162734486 + L2 LINE L2 2226 2309 -1005 264 185 0 0 chr2 90522204 90522258 -162734325 + (TA)n Simple_repeat Simple_repeat 1 54 0 187 220 119 0 chr2 90522771 90522830 -162733753 + L2 LINE L2 3157 3222 -50 2166 111 0 0 chr2 90523381 90523711 -162732872 - AluSx SINE Alu 0 335 6 2278 101 0 0 chr2 90524469 90524765 -162731818 - AluSx SINE Alu -16 296 1 14270 110 61 14 chr2 90524765 90526875 -162729708 - Tigger1 DNA MER2_type -149 2269 53 2167 98 3 30 chr2 90526875 90527180 -162729403 + AluSx SINE Alu 1 297 -15 14270 110 61 14 chr2 90527180 90527236 -162729347 - Tigger1 DNA MER2_type -2365 53 1 1018 163 12 12 chr2 90527968 90528140 -162728443 + AluJb SINE Alu 42 213 -99 190 328 0 0 chr2 90528771 90528829 -162727754 - L3 LINE CR1 -2 1575 1518 1974 236 47 78 chr2 90529916 90530677 -162725906 - L1ME3A LINE L1 -9 6161 5441 6042 110 26 28 chr2 90530677 90532145 -162724438 + L1PA14 LINE L1 4328 5814 -347 2313 107 0 3 chr2 90532145 90532453 -162724130 + AluSx SINE Alu 6 312 0 6042 110 26 28 chr2 90532453 90532800 -162723783 + L1PA14 LINE L1 5814 6160 -1 1974 236 47 78 chr2 90532800 90533038 -162723545 - L1ME3A LINE L1 -729 5441 5197 529 159 87 24 chr2 90533062 90533188 -162723395 - L1MC5 LINE L1 -30 7931 7798 440 311 128 16 chr2 90533324 90533700 -162722883 + L2 LINE L2 1914 2331 -983 6260 141 44 34 chr2 90533766 90534235 -162722348 - L1MC1 LINE L1 0 6333 5870 2149 137 0 10 chr2 90534235 90534548 -162722035 - AluSx SINE Alu -2 310 1 6260 141 44 34 chr2 90534548 90535086 -162721497 - L1MC1 LINE L1 -463 5870 5296 649 256 0 0 chr2 90535086 90535215 -162721368 - FLAM_A SINE Alu -3 130 2 6260 141 44 34 chr2 90535215 90535674 -162720909 - L1MC1 LINE L1 -1037 5296 4843 393 233 0 0 chr2 90535674 90535747 -162720836 - MER2 DNA MER2_type 0 345 273 1639 175 34 20 chr2 90537824 90538116 -162718467 - AluJb SINE Alu -16 296 1 1875 148 7 16 chr2 90538545 90538855 -162717728 - AluJb SINE Alu -5 307 1 389 12 12 71 chr2 90538865 90538949 -162717634 + (TA)n Simple_repeat Simple_repeat 1 79 0 2201 122 0 0 chr2 90538957 90539251 -162717332 - AluSx SINE Alu -18 294 1 274 149 0 0 chr2 90539469 90539516 -162717067 + L1ME4a LINE L1 6062 6108 -13 242 200 86 86 chr2 90540234 90540304 -162716279 - Tigger1 DNA MER2_type -1279 1139 1070 3933 169 111 11 chr2 90540372 90540609 -162715974 - Tigger6b DNA MER2_type -675 922 710 351 0 0 0 chr2 90540609 90540648 -162715935 + (CA)n Simple_repeat Simple_repeat 1 39 0 3933 169 111 11 chr2 90540648 90541246 -162715337 - Tigger6b DNA MER2_type -887 710 3 2300 98 3 0 chr2 90541270 90541565 -162715018 + AluSp SINE Alu 1 296 -17 1370 104 6 0 chr2 90541803 90541986 -162714597 - AluSg/x SINE Alu -19 293 110 21 0 0 0 chr2 90542036 90542057 -162714526 + AT_rich Low_complexity Low_complexity 1 21 0 627 250 81 12 chr2 90543095 90543343 -162713240 + L1MC4a LINE L1 5666 5930 -1878 244 260 0 55 chr2 90544147 90544220 -162712363 - L2 LINE L2 -18 3295 3227 2552 67 3 3 chr2 90544409 90544722 -162711861 - AluSp SINE Alu 0 313 1 316 250 0 0 chr2 90545128 90545196 -162711387 + MER103 DNA DNA 8 75 -91 1683 171 47 3 chr2 90545205 90545504 -162711079 - AluJo SINE Alu 0 312 1 472 274 118 0 chr2 90545611 90545746 -162710837 + MIR SINE MIR 112 262 0 1789 163 0 36 chr2 90546195 90546501 -162710082 + AluJo SINE Alu 4 298 -14 23 54 0 0 chr2 90546648 90546685 -162709898 + AT_rich Low_complexity Low_complexity 1 37 0 1590 163 55 28 chr2 90546753 90547042 -162709541 + AluJb SINE Alu 1 297 -15 833 215 105 5 chr2 90547318 90547509 -162709074 + MER58C DNA MER1_type 3 212 -3 582 292 120 27 chr2 90548270 90548677 -162707906 + MLT1J LTR MaLR 1 509 -2 476 289 178 13 chr2 90548854 90549079 -162707504 + MIR SINE MIR 1 262 0 2771 218 83 24 chr2 90550339 90551404 -162705179 + L1MDb LINE L1 775 1932 -4474 316 305 0 21 chr2 90551404 90551499 -162705084 + LTR16B LTR ERVL 322 414 -50 2316 92 3 3 chr2 90551928 90552231 -162704352 + AluSx SINE Alu 5 307 -5 24 0 0 0 chr2 90553879 90553903 -162702680 + AT_rich Low_complexity Low_complexity 1 24 0 512 263 81 52 chr2 90554214 90554659 -162701924 + L1M3 LINE L1 5257 5711 -469 655 187 50 7 chr2 90554871 90555010 -162701573 - MER105 DNA DNA -58 146 2 256 284 230 10 chr2 90555016 90555198 -162701385 + MIR SINE MIR 38 246 -16 559 258 198 5 chr2 90555707 90555924 -162700659 + MIR SINE MIR 3 261 -1 27 0 0 0 chr2 90556617 90556644 -162699939 + AT_rich Low_complexity Low_complexity 1 27 0 1201 162 98 49 chr2 90556645 90556911 -162699672 + AluJo SINE Alu 1 279 -33 2119 100 41 14 chr2 90557620 90557910 -162698673 - AluSx SINE Alu -14 298 1 945 127 0 0 chr2 90558018 90558160 -162698423 + AluSp/q SINE Alu 170 311 -2 1472 128 34 30 chr2 90560942 90561207 -162695376 - MER1B DNA MER1_type -73 266 1 763 136 42 0 chr2 90561207 90561325 -162695258 + MER68 LTR ERV1 119 241 -321 1059 146 18 0 chr2 90561346 90561511 -162695072 - MER68 LTR ERV1 -171 391 224 920 206 0 29 chr2 90561518 90561693 -162694890 + MER68 LTR ERV1 393 562 0 572 213 65 0 chr2 90561916 90562024 -162694559 - MER5A DNA MER1_type -6 183 69 2023 277 122 57 chr2 90562065 90562648 -162693935 - L2 LINE L2 -6 3307 2763 2006 137 3 0 chr2 90562648 90562941 -162693642 - AluJb SINE Alu -18 294 1 2023 277 122 57 chr2 90562941 90563161 -162693422 - L2 LINE L2 -550 2763 2559 1465 160 25 4 chr2 90563161 90563405 -162693178 + AluJb SINE Alu 27 275 -37 2023 277 122 57 chr2 90563405 90563608 -162692975 - L2 LINE L2 -754 2559 2371 180 0 0 0 chr2 90563608 90563628 -162692955 + (TA)n Simple_repeat Simple_repeat 2 21 0 2023 277 122 57 chr2 90563628 90563996 -162692587 - L2 LINE L2 -942 2371 1848 3641 155 61 46 chr2 90564643 90564719 -162691864 + L1MB8 LINE L1 4903 4976 -1202 1809 176 0 10 chr2 90564719 90565026 -162691557 + AluJb SINE Alu 1 304 -8 3641 155 61 46 chr2 90565026 90565366 -162691217 + L1MB8 LINE L1 4976 5309 -869 1683 157 14 11 chr2 90565366 90565652 -162690931 + AluJo SINE Alu 6 292 -20 3641 155 61 46 chr2 90565652 90566360 -162690223 + L1MB8 LINE L1 5309 6062 -116 2130 130 0 0 chr2 90566449 90566757 -162689826 + AluSx SINE Alu 2 309 -3 259 319 0 0 chr2 90567895 90567964 -162688619 + L2 LINE L2 3204 3272 0 274 296 30 30 chr2 90568160 90568295 -162688288 + L1M4 LINE L1 4187 4321 -1825 763 287 132 39 chr2 90568511 90569103 -162687480 - Tigger8 DNA MER2_type -17 649 3 1998 123 19 38 chr2 90570652 90570969 -162685614 + AluSx SINE Alu 1 311 -1 2127 95 7 17 chr2 90572149 90572443 -162684140 + AluSc SINE Alu 1 291 -18 269 304 180 12 chr2 90572502 90572599 -162683984 - MIR SINE MIR -46 216 137 2004 121 35 7 chr2 90572599 90572889 -162683694 + AluSx SINE Alu 1 298 -14 269 304 180 12 chr2 90572889 90572952 -162683631 - MIR SINE MIR -125 137 29 292 209 229 39 chr2 90574285 90574438 -162682145 + MLT1K LTR MaLR 344 525 -63 2085 113 7 10 chr2 90575512 90575812 -162680771 + AluSx SINE Alu 1 299 -13 29 0 0 0 chr2 90575997 90576026 -162680557 + AT_rich Low_complexity Low_complexity 1 29 0 384 292 189 16 chr2 90581941 90582307 -162674276 + L2 LINE L2 2855 3283 -30 248 250 79 0 chr2 90582955 90583031 -162673552 + MIR SINE MIR 159 240 -22 903 182 57 57 chr2 90583307 90583345 -162673238 - MER3 DNA MER1_type 0 209 172 2153 103 0 3 chr2 90583345 90583663 -162672920 - AluSg SINE Alu 0 317 1 903 182 57 57 chr2 90583663 90583832 -162672751 - MER3 DNA MER1_type -36 173 1 211 191 21 21 chr2 90583859 90583906 -162672677 + MIR SINE MIR 62 108 -100 2480 55 0 10 chr2 90584272 90584579 -162672004 - AluY SINE Alu -1 310 7 243 0 0 0 chr2 90584631 90584658 -162671925 + (CA)n Simple_repeat Simple_repeat 2 28 0 485 233 60 60 chr2 90584841 90585073 -162671510 - L1ME4a LINE L1 -22 6099 5868 902 180 0 41 chr2 90585504 90585703 -162670880 - AluJo SINE Alu 0 313 122 489 243 27 0 chr2 90586304 90586415 -162670168 + MIR3 SINE MIR 78 191 -17 208 163 0 20 chr2 90586548 90586597 -162669986 + T-rich Low_complexity Low_complexity 2 49 0 827 222 46 67 chr2 90586601 90586699 -162669884 - MIR SINE MIR -3 259 160 2061 124 3 0 chr2 90586699 90587042 -162669541 + AluSp SINE Alu 2 345 0 827 222 46 67 chr2 90587042 90587181 -162669402 - MIR SINE MIR -102 160 26 198 0 0 0 chr2 90587276 90587298 -162669285 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 200 233 17 0 chr2 90587383 90587443 -162669140 + (TA)n Simple_repeat Simple_repeat 2 62 0 1965 214 38 21 chr2 90587504 90588193 -162668390 - L1MCa LINE L1 -4260 2347 1645 1588 211 29 43 chr2 90588192 90588567 -162668016 - L1MCa LINE L1 -5939 487 118 * 965 174 77 10 chr2 90588568 90588763 -162667820 + AluJb SINE Alu 84 291 -21 498 132 55 22 chr2 90588772 90588863 -162667720 - L1MCa LINE L1 -6325 101 8 1921 157 0 3 chr2 90589009 90589314 -162667269 + AluJb SINE Alu 1 304 -8 987 284 71 20 chr2 90589323 90589717 -162666866 + L1MD2 LINE L1 16 429 -6111 217 0 0 57 chr2 90590090 90590125 -162666458 + (GAA)n Simple_repeat Simple_repeat 1 33 0 5147 188 94 48 chr2 90590128 90591632 -162664951 + L1MD2 LINE L1 1010 2811 -3729 893 160 0 0 chr2 90591632 90591763 -162664820 + FLAM_A SINE Alu 1 131 -2 5147 188 94 48 chr2 90591763 90592566 -162664017 + L1MD2 LINE L1 2811 3576 -2964 2234 88 0 0 chr2 90592566 90592895 -162663688 + AluSg SINE Alu 1 329 0 5193 179 79 14 chr2 90592901 90594147 -162662436 + L1MD2 LINE L1 5405 6731 -22 2129 129 0 0 chr2 90594339 90594648 -162661935 - AluSx SINE Alu -3 309 1 299 272 58 40 chr2 90594890 90595063 -162661520 - L1M4 LINE L1 -1563 4583 4408 396 0 0 0 chr2 90595138 90595182 -162661401 + (TA)n Simple_repeat Simple_repeat 1 44 0 2555 217 52 32 chr2 90595193 90595944 -162660639 - L1MDa LINE L1 -1545 4995 4230 604 165 0 0 chr2 90595950 90596035 -162660548 + AluJ/FLAM SINE Alu 3 87 -225 720 54 14 54 chr2 90596044 90596192 -162660391 + (TCTA)n Simple_repeat Simple_repeat 1 142 0 359 0 0 42 chr2 90596190 90596238 -162660345 + (TAGA)n Simple_repeat Simple_repeat 1 46 0 * 5180 213 79 16 chr2 90596241 90597641 -162658942 - L1MDa LINE L1 -2322 4218 2908 2371 79 3 0 chr2 90597641 90597933 -162658650 + AluSx SINE Alu 20 312 0 255 61 0 0 chr2 90597933 90597966 -162658617 + (TA)n Simple_repeat Simple_repeat 1 33 0 5180 213 79 16 chr2 90597966 90598298 -162658285 - L1MDa LINE L1 -3631 2909 2371 4271 159 19 37 chr2 90598284 90599539 -162657044 - L1MB7 LINE L1 -8 6570 1921 * 183 129 0 0 chr2 90599590 90599621 -162656962 + (CATA)n Simple_repeat Simple_repeat 2 32 0 3241 162 14 10 chr2 90599621 90600134 -162656449 - MLT2B3 LTR ERVL -39 515 1 1026 180 21 5 chr2 90600137 90600331 -162656252 - L1MDa LINE L1 -4621 1919 1723 1540 166 57 97 chr2 90600337 90600423 -162656160 - L1MDa LINE L1 -4980 1560 1472 212 0 36 0 chr2 90600423 90600451 -162656132 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1540 166 57 97 chr2 90600451 90600500 -162656083 - L1MDa LINE L1 -5068 1472 1423 1981 141 3 52 chr2 90600500 90600826 -162655757 - AluSx SINE Alu -2 310 1 1540 166 57 97 chr2 90600826 90601078 -162655505 - L1MDa LINE L1 -5117 1423 1163 4270 116 19 54 chr2 90601078 90601142 -162655441 + L1MA8 LINE L1 5556 5621 -670 1827 117 65 45 chr2 90601142 90601432 -162655151 + AluSx SINE Alu 1 296 -16 4270 116 19 54 chr2 90601432 90601659 -162654924 + L1MA8 LINE L1 5621 5855 -436 759 165 24 8 chr2 90601659 90601786 -162654797 + FLAM_C SINE Alu 2 130 -3 4270 116 19 54 chr2 90601786 90602251 -162654332 + L1MA8 LINE L1 5855 6286 -5 1540 166 57 97 chr2 90602251 90602314 -162654269 - L1MDa LINE L1 -5377 1163 1126 1662 200 63 31 chr2 90602318 90602634 -162653949 - MLT1C LTR MaLR -23 444 109 2064 123 25 0 chr2 90602634 90602918 -162653665 - AluSx SINE Alu -21 291 1 1662 200 63 31 chr2 90602918 90603026 -162653557 - MLT1C LTR MaLR -358 109 6 1171 254 81 3 chr2 90603031 90603463 -162653120 - L1MDa LINE L1 -5407 1133 580 638 268 112 77 chr2 90603460 90603528 -162653055 - L1MEd LINE L1 -3225 2904 2840 * 2597 58 0 3 chr2 90603528 90603839 -162652744 - AluY SINE Alu -1 310 1 638 268 112 77 chr2 90603839 90604158 -162652425 - L1MEd LINE L1 -3289 2840 2534 1243 196 165 38 chr2 90604158 90604504 -162652079 + MLT1B LTR MaLR 1 390 0 638 268 112 77 chr2 90604504 90604857 -162651726 - L1MEd LINE L1 -3595 2534 2137 2472 120 16 0 chr2 90605484 90605852 -162650731 - L1MA2 LINE L1 0 6304 5931 339 315 39 51 chr2 90605864 90605984 -162650599 - HAL1 LINE L1 -938 1569 1450 2382 83 6 13 chr2 90605984 90606297 -162650286 - AluY SINE Alu 0 311 1 339 315 39 51 chr2 90606297 90606354 -162650229 - HAL1 LINE L1 -1057 1450 1394 1849 125 52 14 chr2 90606420 90606707 -162649876 + MER7A DNA MER2_type 50 345 -1 1387 264 68 107 chr2 90606708 90607580 -162649003 - L1MEd LINE L1 -4885 1234 407 216 0 0 0 chr2 90607580 90607604 -162648979 + (TA)n Simple_repeat Simple_repeat 2 25 0 1387 264 68 107 chr2 90607604 90607760 -162648823 - L1MEd LINE L1 -5712 407 246 2493 66 0 28 chr2 90607764 90608081 -162648502 - AluY SINE Alu -1 310 3 617 237 86 14 chr2 90608081 90608292 -162648291 + L1ME3 LINE L1 5942 6166 -4 321 222 103 16 chr2 90608333 90608459 -162648124 - L1MEd LINE L1 -5980 139 3 2268 110 10 0 chr2 90608808 90609116 -162647467 - AluSx SINE Alu -1 311 1 1806 199 74 31 chr2 90609164 90609612 -162646971 + MLT1C LTR MaLR 1 467 0 289 240 160 20 chr2 90610675 90610775 -162645808 + L2 LINE L2 2930 3043 -229 218 189 0 0 chr2 90611086 90611123 -162645460 + GA-rich Low_complexity Low_complexity 1 37 0 501 318 49 4 chr2 90611129 90611374 -162645209 + L1ME4a LINE L1 5316 5571 -2237 395 244 44 87 chr2 90611416 90611645 -162644938 + L1ME4a LINE L1 5704 5922 -199 1641 170 30 3 chr2 90611659 90611959 -162644624 + AluJb SINE Alu 3 310 -2 2544 189 80 33 chr2 90612104 90612703 -162643880 - L1ME1 LINE L1 -5 6161 5535 368 281 115 0 chr2 90614265 90614404 -162642179 + MIR SINE MIR 31 185 -77 445 223 254 8 chr2 90614480 90614610 -162641973 + MER5A DNA MER1_type 28 189 0 517 212 235 0 chr2 90615365 90615497 -162641086 - MER5A DNA MER1_type 0 189 27 534 241 18 0 chr2 90615596 90615708 -162640875 - MIR SINE MIR -88 174 61 2611 114 52 33 chr2 90615858 90616207 -162640376 + MSTA LTR MaLR 1 342 -86 3544 60 27 5 chr2 90616207 90616653 -162639930 - L1PA7 LINE L1 0 6154 5699 2203 87 14 0 chr2 90616653 90616942 -162639641 - AluY SINE Alu -18 293 1 2611 114 52 33 chr2 90616942 90617011 -162639572 + MSTA LTR MaLR 341 428 0 2803 194 17 29 chr2 90617425 90617946 -162638637 - MLT2B2 LTR ERVL 0 515 1 240 324 14 14 chr2 90618384 90618455 -162638128 + L2 LINE L2 3202 3272 0 326 258 132 123 chr2 90619471 90619820 -162636763 - L2 LINE L2 -633 2681 2330 2472 140 125 32 chr2 90620027 90620491 -162636092 - LTR22 LTR ERVK -2 507 1 1436 218 70 49 chr2 90620965 90621391 -162635192 + MLT1D LTR MaLR 1 435 -70 821 124 0 0 chr2 90621396 90621517 -162635066 - AluSc SINE Alu 0 309 189 235 171 24 0 chr2 90621523 90621564 -162635019 + MLT1D LTR MaLR 426 467 0 670 285 89 57 chr2 90621636 90621779 -162634804 - L1ME3A LINE L1 -274 5896 5759 2329 84 3 3 chr2 90621779 90622077 -162634506 + AluSx SINE Alu 1 298 -14 324 70 0 0 chr2 90622080 90622123 -162634460 + (CA)n Simple_repeat Simple_repeat 2 44 0 670 285 89 57 chr2 90622123 90622469 -162634114 - L1ME3A LINE L1 -412 5758 5387 26 50 0 0 chr2 90622578 90622618 -162633965 + AT_rich Low_complexity Low_complexity 1 40 0 1845 197 46 14 chr2 90622642 90622992 -162633591 - MLT1A1 LTR MaLR -4 361 1 290 235 55 142 chr2 90623146 90623297 -162633286 - L1MC5 LINE L1 -301 7660 7497 2191 97 0 0 chr2 90623297 90623596 -162632987 + AluSc SINE Alu 1 299 0 290 235 55 142 chr2 90623596 90623710 -162632873 - L1MC5 LINE L1 -464 7497 7375 2546 67 15 90 chr2 90623710 90624099 -162632484 - L1PA11 LINE L1 0 6174 5815 290 235 55 142 chr2 90624099 90625065 -162631518 - L1MC5 LINE L1 -586 7375 6698 2003 98 76 0 chr2 90625370 90625647 -162630936 + AluSx SINE Alu 1 298 -14 1967 159 36 9 chr2 90625920 90626254 -162630329 + MER2 DNA MER2_type 2 344 0 305 262 67 20 chr2 90626313 90626462 -162630121 - L1ME3A LINE L1 -905 5241 5086 230 28 0 56 chr2 90626462 90626498 -162630085 + (TCTCCC)n Simple_repeat Simple_repeat 6 39 0 4392 128 62 17 chr2 90626499 90627753 -162628830 + SVA Other Other 2 868 -518 6056 102 37 30 chr2 90627793 90628741 -162627842 + SVA Other Other 432 1386 0 312 360 43 11 chr2 90628746 90628932 -162627651 - L1ME3A LINE L1 -1054 5092 4901 321 299 218 20 chr2 90629278 90629425 -162627158 + MER5B DNA MER1_type 3 178 0 350 272 150 69 chr2 90629666 90629912 -162626671 - L2 LINE L2 -8 3264 2999 1087 149 51 44 chr2 90629931 90630187 -162626396 + L1MB5 LINE L1 5134 5394 -779 2273 107 0 0 chr2 90630187 90630486 -162626097 + AluSq SINE Alu 1 299 -14 1087 149 51 44 chr2 90630486 90630523 -162626060 + L1MB5 LINE L1 5394 5429 -744 6137 96 41 28 chr2 90630524 90632584 -162623999 + SVA Other Other 13 1384 -2 1476 194 58 7 chr2 90632584 90633068 -162623515 + L1MB5 LINE L1 5415 6140 -31 1706 195 99 34 chr2 90633072 90633161 -162623422 - Charlie2 DNA MER1_type -416 2446 2364 2520 142 39 23 chr2 90633161 90633598 -162622985 - MER65A LTR ERV1 -1 444 1 1706 195 99 34 chr2 90633598 90634063 -162622520 - Charlie2 DNA MER1_type -498 2364 1856 610 314 63 40 chr2 90634032 90634335 -162622248 - Charlie2 DNA MER1_type -2436 346 37 * 1587 277 42 71 chr2 90635266 90636327 -162620256 + L1MEc LINE L1 100 1129 -5267 463 208 94 0 chr2 90636328 90636434 -162620149 - MER46A DNA MER2_type -117 119 4 * 524 167 76 68 chr2 90636434 90636528 -162620055 + MER46A DNA MER2_type 142 236 0 810 267 138 41 chr2 90636529 90637259 -162619324 + L1MEc LINE L1 1136 1936 -4460 363 283 0 10 chr2 90637563 90637662 -162618921 + MIR SINE MIR 161 258 -4 839 228 27 13 chr2 90637853 90638077 -162618506 + L1ME3A LINE L1 5942 6168 -2 287 177 9 97 chr2 90638296 90638409 -162618174 - HAL1b LINE L1 -42 1306 1204 3480 148 26 19 chr2 90638473 90639114 -162617469 - L1MB3 LINE L1 -2 6181 5536 8465 215 76 22 chr2 90639118 90639761 -162616822 + L1MB3 LINE L1 543 1150 -5232 1590 160 114 18 chr2 90639761 90640042 -162616541 + AluJb SINE Alu 1 308 -4 8465 215 76 22 chr2 90640042 90640628 -162615955 + L1MB3 LINE L1 1150 1703 -4679 2726 7 0 13 chr2 90640628 90640936 -162615647 + AluYa5 SINE Alu 1 304 -7 8465 215 76 22 chr2 90640936 90641121 -162615462 + L1MB3 LINE L1 1703 1876 -4506 1963 119 4 11 chr2 90641121 90641399 -162615184 + AluSx SINE Alu 1 276 -36 8465 215 76 22 chr2 90641399 90641653 -162614930 + L1MB3 LINE L1 1876 2115 -4267 2065 144 7 0 chr2 90641653 90641952 -162614631 - AluJb SINE Alu -11 301 1 8465 215 76 22 chr2 90641952 90642431 -162614152 + L1MB3 LINE L1 2115 2567 -3815 2131 119 30 0 chr2 90642431 90642734 -162613849 + AluSx SINE Alu 1 312 0 8465 215 76 22 chr2 90642734 90643130 -162613453 + L1MB3 LINE L1 2567 2940 -3442 1598 164 38 17 chr2 90643130 90643417 -162613166 + AluJb SINE Alu 1 293 -19 8465 215 76 22 chr2 90643417 90645377 -162611206 + L1MB3 LINE L1 2940 5306 -1076 993 169 30 0 chr2 90645391 90645557 -162611026 + FAM SINE Alu 1 171 -4 924 152 0 0 chr2 90645618 90645756 -162610827 + FLAM_C SINE Alu 1 138 -5 4125 154 60 40 chr2 90645774 90646634 -162609949 + L1MB3 LINE L1 5411 6297 -122 2270 101 10 3 chr2 90646634 90646932 -162609651 + AluSq SINE Alu 1 300 -13 4125 154 60 40 chr2 90646932 90647058 -162609525 + L1MB3 LINE L1 6297 6419 0 733 230 17 45 chr2 90648425 90648603 -162607980 + FAM SINE Alu 1 173 -2 2103 140 0 0 chr2 90648940 90649248 -162607335 - AluSx SINE Alu -4 308 1 830 153 8 0 chr2 90649668 90649799 -162606784 - AluJb SINE Alu -180 132 1 23 0 0 0 chr2 90649842 90649865 -162606718 + AT_rich Low_complexity Low_complexity 1 23 0 848 136 8 8 chr2 90650058 90650190 -162606393 + AluJb SINE Alu 1 132 -180 198 0 0 0 chr2 90650243 90650265 -162606318 + (GA)n Simple_repeat Simple_repeat 2 23 0 381 236 236 33 chr2 90650301 90650572 -162606011 - L1ME LINE L1 -374 5792 5467 594 251 204 28 chr2 90650880 90651135 -162605448 + L2 LINE L2 2101 2400 -914 23 0 0 0 chr2 90651144 90651167 -162605416 + AT_rich Low_complexity Low_complexity 1 23 0 631 83 0 0 chr2 90651377 90651461 -162605122 - AluSg/x SINE Alu -13 299 216 472 219 98 58 chr2 90652068 90652227 -162604356 - L1MC5 LINE L1 -44 7917 7747 1761 157 28 64 chr2 90652227 90652584 -162603999 + MER2 DNA MER2_type 1 344 0 472 219 98 58 chr2 90652584 90652629 -162603954 - L1MC5 LINE L1 -214 7747 7705 236 290 136 18 chr2 90652647 90652816 -162603767 - HAL1 LINE L1 -1155 1352 1164 208 130 0 87 chr2 90652816 90652862 -162603721 + MIR SINE MIR 141 182 -80 295 268 54 24 chr2 90652935 90653103 -162603480 - HAL1 LINE L1 -1345 1162 990 220 204 20 0 chr2 90653216 90653265 -162603318 + GA-rich Low_complexity Low_complexity 2 51 0 524 319 119 44 chr2 90653351 90653806 -162602777 - L2 LINE L2 -1 3312 2824 3109 142 19 16 chr2 90654941 90655504 -162601079 + L1MB3 LINE L1 5603 6167 -16 1318 138 113 118 chr2 90655634 90656084 -162600499 - LTR7 LTR ERV1 -2 448 1 2239 103 96 23 chr2 90656341 90656738 -162599845 + MSTA LTR MaLR 1 426 -2 2176 97 31 0 chr2 90657545 90657835 -162598748 - AluSq SINE Alu -14 299 1 1106 193 0 27 chr2 90658130 90658353 -162598230 + MER20 DNA MER1_type 1 217 -2 1635 167 52 0 chr2 90658892 90659180 -162597403 - AluJb SINE Alu -9 303 1 2515 66 0 0 chr2 90659340 90659642 -162596941 - AluY SINE Alu -9 302 1 2956 146 32 29 chr2 90659802 90660362 -162596221 - L1MD1 LINE L1 0 6242 5681 1066 95 84 5 chr2 90660364 90660554 -162596029 - L1MD1 LINE L1 -694 5548 5344 2146 107 30 3 chr2 90660752 90661051 -162595532 - AluSc SINE Alu -2 307 1 317 200 77 0 chr2 90661213 90661278 -162595305 - L2 LINE L2 -9 3263 3194 2111 98 18 3 chr2 90661306 90661614 -162594969 + AluSx SINE Alu 1 312 0 596 162 19 0 chr2 90661618 90661723 -162594860 + U6 snRNA snRNA 1 107 0 194 286 0 0 chr2 90661768 90661831 -162594752 - L2 LINE L2 -299 2973 2911 244 169 77 0 chr2 90662042 90662107 -162594476 - L1MB4 LINE L1 -7 6173 6104 21 36 0 0 chr2 90662107 90662135 -162594448 + AT_rich Low_complexity Low_complexity 1 28 0 192 320 204 0 chr2 90662252 90662355 -162594228 - L2 LINE L2 0 3313 3190 215 374 144 0 chr2 90662905 90663044 -162593539 - MIR3 SINE MIR -19 189 31 6001 131 39 7 chr2 90663244 90664362 -162592221 - L1MC1 LINE L1 0 6333 5180 1223 193 76 53 chr2 90664450 90664807 -162591776 - MLT1A1 LTR MaLR 0 365 1 187 208 19 75 chr2 90665091 90665144 -162591439 - L2 LINE L2 -1 3312 3263 57 66 0 0 chr2 90665317 90665423 -162591160 + AT_rich Low_complexity Low_complexity 1 106 0 24 0 0 0 chr2 90665487 90665511 -162591072 + AT_rich Low_complexity Low_complexity 1 24 0 375 147 15 29 chr2 90666889 90666957 -162589626 - MER58A DNA MER1_type -40 67 1 243 358 41 0 chr2 90667150 90667273 -162589310 - MIR SINE MIR -97 165 38 265 291 103 8 chr2 90667827 90667944 -162588639 + L2 LINE L2 3145 3272 0 561 243 72 58 chr2 90669667 90669764 -162586819 + L1ME LINE L1 5509 5603 -518 777 101 14 65 chr2 90669764 90669903 -162586680 + FLAM_C SINE Alu 2 133 0 561 243 72 58 chr2 90669903 90670017 -162586566 + L1ME LINE L1 5603 5729 -392 1603 142 96 28 chr2 90670017 90670299 -162586284 + AluJb SINE Alu 1 301 -11 561 243 72 58 chr2 90670299 90670327 -162586256 + L1ME LINE L1 5729 5755 -366 221 208 13 104 chr2 90672090 90672167 -162584416 - MIR SINE MIR -178 84 15 849 156 0 15 chr2 90672279 90672414 -162584169 + FLAM_C SINE Alu 1 133 0 2164 111 43 8 chr2 90672495 90672846 -162583737 - L1MC1 LINE L1 -1 6332 5970 1592 116 116 3 chr2 90672858 90673151 -162583432 - L1PA13 LINE L1 -21 6142 5817 * 2982 172 96 17 chr2 90673147 90674151 -162582432 - L1MC1 LINE L1 -350 5983 4868 1425 151 109 19 chr2 90674151 90674416 -162582167 - AluJb SINE Alu -23 289 1 2982 172 96 17 chr2 90674416 90674760 -162581823 - L1MC1 LINE L1 -1465 4868 4552 1915 127 182 3 chr2 90675073 90675436 -162581147 + MSTA LTR MaLR 1 428 0 9446 124 29 28 chr2 90675438 90677014 -162579569 + MSTA-int LTR MaLR 3 1580 0 2095 97 166 19 chr2 90677014 90677387 -162579196 + MSTA LTR MaLR 1 428 0 324 208 169 39 chr2 90678382 90678536 -162578047 + L1M4 LINE L1 -175 4294967294 -6282 4074 211 190 71 chr2 90678794 90679039 -162577544 + L1M4 LINE L1 969 1184 -5198 1924 130 3 20 chr2 90679039 90679332 -162577251 + AluJb SINE Alu 1 288 -24 4074 211 190 71 chr2 90679332 90680120 -162576463 + L1M4 LINE L1 1184 1877 -4505 1724 162 23 26 chr2 90680120 90680422 -162576161 + AluJo SINE Alu 1 301 -11 4074 211 190 71 chr2 90680422 90681391 -162575192 + L1M4 LINE L1 1877 2730 -3652 2321 87 0 0 chr2 90681391 90681678 -162574905 + AluSc SINE Alu 13 299 -10 4074 211 190 71 chr2 90681678 90681741 -162574842 + L1M4 LINE L1 2730 2784 -3598 1041 239 21 0 chr2 90681741 90681975 -162574608 - MLT1A1 LTR MaLR -126 239 1 4074 211 190 71 chr2 90681975 90683648 -162572935 + L1M4 LINE L1 2784 5340 -1042 201 300 0 0 chr2 90684184 90684244 -162572339 + L2 LINE L2 2924 2983 -289 661 220 104 104 chr2 90684377 90684526 -162572057 + MIR SINE MIR 22 170 -92 2004 122 0 53 chr2 90684526 90684845 -162571738 + AluSx SINE Alu 1 302 -10 661 220 104 104 chr2 90684845 90684856 -162571727 + MIR SINE MIR 170 180 -82 2074 131 0 13 chr2 90684856 90685162 -162571421 + AluJb SINE Alu 1 302 -10 661 220 104 104 chr2 90685162 90685241 -162571342 + MIR SINE MIR 179 262 0 1391 180 183 70 chr2 90685311 90685805 -162570778 - MLT1F1 LTR MaLR -26 541 1 239 195 0 0 chr2 90686091 90686132 -162570451 - LTR3b LTR ERVK 0 437 397 2197 170 41 12 chr2 90686136 90686553 -162570030 - LTR3 LTR ERVK 0 429 1 21 0 0 0 chr2 90687289 90687310 -162569273 + AT_rich Low_complexity Low_complexity 1 21 0 251 250 79 0 chr2 90687676 90687752 -162568831 + MIR SINE MIR 159 240 -22 824 182 57 57 chr2 90688028 90688067 -162568516 - MER3 DNA MER1_type 0 209 171 2345 107 0 0 chr2 90688067 90688377 -162568206 - AluSg SINE Alu 0 310 1 824 182 57 57 chr2 90688377 90688546 -162568037 - MER3 DNA MER1_type -37 172 1 209 191 21 21 chr2 90688573 90688620 -162567963 + MIR SINE MIR 62 108 -100 2416 59 0 10 chr2 90688986 90689293 -162567290 - AluY SINE Alu -6 305 2 225 0 0 0 chr2 90689340 90689365 -162567218 + (CA)n Simple_repeat Simple_repeat 2 26 0 460 224 60 60 chr2 90689548 90689780 -162566803 - L1ME4a LINE L1 -22 6099 5868 902 180 0 41 chr2 90690211 90690410 -162566173 - AluJo SINE Alu 0 313 122 484 252 27 0 chr2 90691011 90691122 -162565461 + MIR3 SINE MIR 78 191 -17 208 163 0 20 chr2 90691255 90691304 -162565279 + T-rich Low_complexity Low_complexity 2 49 0 837 226 46 67 chr2 90691308 90691406 -162565177 - MIR SINE MIR -3 259 160 2111 113 3 0 chr2 90691406 90691741 -162564842 + AluSp SINE Alu 2 337 0 837 226 46 67 chr2 90691741 90691880 -162564703 - MIR SINE MIR -102 160 26 198 0 0 0 chr2 90691975 90691997 -162564586 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 200 233 17 0 chr2 90692082 90692142 -162564441 + (TA)n Simple_repeat Simple_repeat 2 62 0 1871 221 36 18 chr2 90692205 90692892 -162563691 - L1MCa LINE L1 -4262 2345 1645 1587 199 29 45 chr2 90692891 90693267 -162563316 - L1MCa LINE L1 -5939 487 118 * 966 174 77 10 chr2 90693268 90693463 -162563120 + AluJb SINE Alu 84 291 -21 492 138 50 0 chr2 90693472 90693552 -162563031 - L1MCa LINE L1 -6325 101 18 1905 157 0 3 chr2 90693709 90694014 -162562569 + AluJb SINE Alu 1 304 -8 995 282 71 20 chr2 90694023 90694417 -162562166 + L1MDa LINE L1 16 429 -6111 244 0 0 53 chr2 90694790 90694828 -162561755 + (GAA)n Simple_repeat Simple_repeat 1 36 0 4899 191 96 48 chr2 90694844 90696339 -162560244 + L1MDa LINE L1 1017 2639 -3901 833 160 0 0 chr2 90696339 90696470 -162560113 + FLAM_A SINE Alu 1 131 -2 4899 191 96 48 chr2 90696470 90697093 -162559490 + L1MDa LINE L1 2639 3231 -3309 476 223 77 8 chr2 90697214 90697344 -162559239 - MER91A DNA MER1_type -57 139 1 333 278 110 46 chr2 90697674 90697847 -162558736 + MIR3 SINE MIR 5 188 -20 868 134 8 0 chr2 90698096 90698223 -162558360 + FLAM_C SINE Alu 1 128 -5 504 0 0 0 chr2 90698968 90699024 -162557559 + (CA)n Simple_repeat Simple_repeat 1 56 0 802 194 17 17 chr2 90699429 90699604 -162556979 - MER45A DNA AcHobo 0 178 4 306 371 28 0 chr2 90700285 90700428 -162556155 + MIR SINE MIR 62 208 -54 228 146 0 24 chr2 90700696 90700737 -162555846 + MLT1J LTR MaLR 95 134 -377 655 140 34 16 chr2 90700953 90701205 -162555378 + CT-rich Low_complexity Low_complexity 1 256 0 1348 151 19 0 chr2 90701209 90701414 -162555169 - AluJb SINE Alu -1 311 103 1732 122 68 54 chr2 90701664 90701806 -162554777 + AluJo SINE Alu 7 146 -166 2395 95 0 0 chr2 90701806 90702110 -162554473 + AluSc SINE Alu 1 304 -5 1732 122 68 54 chr2 90702110 90702263 -162554320 + AluJo SINE Alu 146 306 -6 874 140 140 0 chr2 90702263 90702406 -162554177 + AluJb SINE Alu 134 296 -16 609 277 56 80 chr2 90702613 90703129 -162553454 + LTR33A LTR ERVL 1 504 -19 267 276 120 44 chr2 90703886 90704111 -162552472 + L1ME4a LINE L1 5757 5998 -123 216 0 0 0 chr2 90705255 90705279 -162551304 + (T)n Simple_repeat Simple_repeat 1 24 0 367 333 19 0 chr2 90705954 90706062 -162550521 - MER5A DNA MER1_type -77 112 3 21 36 0 0 chr2 90706683 90706711 -162549872 + AT_rich Low_complexity Low_complexity 1 28 0 582 255 54 5 chr2 90706806 90707005 -162549578 + MER63 DNA MER1_type 5 1688 0 420 333 25 19 chr2 90707476 90707638 -162548945 - L1ME LINE L1 -417 5773 5611 259 314 170 22 chr2 90708139 90708457 -162548126 - L1ME LINE L1 -4408 1988 1624 2818 13 0 3 chr2 90708502 90708814 -162547769 + AluYa5 SINE Alu 1 311 0 328 343 50 18 chr2 90708825 90709044 -162547539 - L1ME LINE L1 -4808 1588 1363 22 56 0 0 chr2 90709319 90709355 -162547228 + AT_rich Low_complexity Low_complexity 1 36 0 1757 192 76 15 chr2 90709393 90709709 -162546874 - LTR27 LTR ERV1 0 501 165 1960 147 0 3 chr2 90709709 90710009 -162546574 + AluSx SINE Alu 1 299 -13 1757 192 76 15 chr2 90710009 90710183 -162546400 - LTR27 LTR ERV1 -336 165 3 205 272 25 25 chr2 90710197 90710278 -162546305 + T-rich Low_complexity Low_complexity 5 85 0 856 183 5 55 chr2 90710336 90710538 -162546045 - Charlie1b DNA MER1_type -248 275 84 773 276 41 101 chr2 90710852 90711442 -162545141 + MLT1F LTR MaLR 1 542 0 22 0 0 0 chr2 90711925 90711947 -162544636 + AT_rich Low_complexity Low_complexity 1 22 0 1725 201 17 14 chr2 90712186 90712534 -162544049 - MLT1A1 LTR MaLR 0 365 17 2065 155 6 3 chr2 90713189 90713525 -162543058 - MER1B DNA MER1_type 0 337 1 366 280 106 29 chr2 90714207 90714381 -162542202 + MLT1F1 LTR MaLR 1 180 -362 317 188 12 0 chr2 90714394 90714479 -162542104 + CT-rich Low_complexity Low_complexity 2 87 0 2126 176 7 48 chr2 90714519 90714933 -162541650 - MER54A LTR ERVL -2 899 503 680 35 11 0 chr2 90714938 90715025 -162541558 + (TC)n Simple_repeat Simple_repeat 1 88 0 843 318 36 7 chr2 90715176 90715484 -162541099 + MLT1F1 LTR MaLR 247 563 -4 519 340 43 13 chr2 90715496 90715731 -162540852 + MIR SINE MIR 18 259 -3 294 250 36 0 chr2 90715910 90715994 -162540589 - L2 LINE L2 -876 2438 2352 322 286 13 0 chr2 90716105 90716182 -162540401 - MER5A DNA MER1_type -98 91 14 548 254 100 48 chr2 90716194 90716505 -162540078 + MER97b DNA MER1_type? 72 398 -655 24 32 0 0 chr2 90716551 90716582 -162540001 + AT_rich Low_complexity Low_complexity 1 31 0 927 299 80 10 chr2 90716599 90717500 -162539083 - L1ME LINE L1 -1830 4576 3588 717 269 15 25 chr2 90717509 90717706 -162538877 - MER58A DNA MER1_type -1 223 29 372 319 19 6 chr2 90717757 90717914 -162538669 - L1ME LINE L1 -2823 3583 3425 813 258 51 55 chr2 90717921 90718336 -162538247 - L1ME LINE L1 -3055 3351 2939 343 209 0 0 chr2 90718338 90718405 -162538178 + AluJ/monomer SINE Alu 235 301 -1 241 266 221 28 chr2 90718420 90718845 -162537738 - L1ME LINE L1 -3475 2931 2425 411 309 64 21 chr2 90719231 90719619 -162536964 - L1ME LINE L1 -4998 1411 1007 1518 233 17 3 chr2 90719641 90720001 -162536582 + MLT1A1 LTR MaLR 1 365 0 3261 239 48 10 chr2 90720017 90721148 -162535435 + L1 LINE L1 2253 3426 -2720 725 228 44 26 chr2 90721119 90721391 -162535192 + L1ME4a LINE L1 4360 4636 -1510 * 513 111 0 0 chr2 90721414 90721486 -162535097 + tRNA-Pro-CCT tRNA tRNA 1 72 -3 2847 19 0 0 chr2 90721560 90721875 -162534708 + AluYb8 SINE Alu 1 315 -3 578 292 63 11 chr2 90721907 90722191 -162534392 + L1MB7 LINE L1 5884 6182 -2 21 36 0 0 chr2 90722840 90722868 -162533715 + AT_rich Low_complexity Low_complexity 1 28 0 33 66 0 0 chr2 90723580 90723641 -162532942 + AT_rich Low_complexity Low_complexity 1 61 0 546 320 88 47 chr2 90723665 90724199 -162532384 + L1ME4a LINE L1 5270 5825 -296 22 35 0 0 chr2 90727394 90727423 -162529160 + AT_rich Low_complexity Low_complexity 1 29 0 643 250 111 41 chr2 90728247 90728491 -162528092 - MIR SINE MIR -1 261 1 2429 84 0 3 chr2 90728550 90728858 -162527725 - AluY SINE Alu -4 307 1 1979 95 4 0 chr2 90728985 90729237 -162527346 - AluSp SINE Alu -17 296 44 967 97 15 0 chr2 90730299 90730433 -162526150 + AluSq/x SINE Alu 1 136 -177 1553 194 3 11 chr2 90730606 90730890 -162525693 + AluJo SINE Alu 1 282 -30 2308 110 0 0 chr2 90731169 90731468 -162525115 - AluSq SINE Alu -14 299 1 388 269 56 0 chr2 90731472 90731580 -162525003 + MER94 DNA DNA 5 118 -16 1043 274 104 30 chr2 90732284 90732900 -162523683 + L2 LINE L2 2650 3310 -3 1923 168 0 0 chr2 90733014 90733317 -162523266 - AluSx SINE Alu -9 303 1 819 249 129 42 chr2 90734407 90734817 -162521766 - MLT1J1 LTR MaLR 0 446 1 277 250 56 56 chr2 90735024 90735132 -162521451 - MIR SINE MIR -36 226 119 2155 115 0 3 chr2 90735667 90735962 -162520621 - AluSq SINE Alu -19 294 1 1366 207 59 65 chr2 90735995 90736140 -162520443 - L1ME2 LINE L1 0 6164 6020 2153 95 32 0 chr2 90736140 90736424 -162520159 - AluSg SINE Alu -17 293 1 1366 207 59 65 chr2 90736424 90736778 -162519805 - L1ME2 LINE L1 -144 6020 5666 1680 168 0 13 chr2 90736778 90737081 -162519502 - AluY SINE Alu -12 299 1 1366 207 59 65 chr2 90737081 90737102 -162519481 - L1ME2 LINE L1 -498 5666 5646 3126 129 104 47 chr2 90737210 90737890 -162518693 + LTR8A LTR ERV1 9 727 0 626 228 68 0 chr2 90739101 90739263 -162517320 - MIR SINE MIR -87 175 3 2244 103 0 10 chr2 90739380 90739712 -162516871 + AluY SINE Alu 1 329 0 540 309 19 29 chr2 90741875 90742085 -162514498 + MIR SINE MIR 34 241 -21 1141 107 6 51 chr2 90742228 90742405 -162514178 + AluSg/x SINE Alu 128 296 -14 321 26 0 0 chr2 90742509 90742547 -162514036 + (TTCA)n Simple_repeat Simple_repeat 1 38 0 1224 340 0 69 chr2 90743649 90743984 -162512599 - AluSx SINE Alu 0 312 1 2280 75 16 29 chr2 90744496 90744802 -162511781 - AluY SINE Alu -9 302 1 2121 122 17 0 chr2 90745825 90746113 -162510470 + AluSx SINE Alu 1 293 -19 1892 153 11 0 chr2 90746659 90746946 -162509637 + AluSx SINE Alu 6 295 -17 320 311 143 26 chr2 90747234 90747661 -162508922 - L2 LINE L2 -1139 2175 1699 1829 182 0 16 chr2 90747706 90748013 -162508570 - AluJb SINE Alu -10 302 1 2155 66 44 0 chr2 90748529 90748828 -162507755 - AluSp SINE Alu 0 311 1 2447 71 0 7 chr2 90749242 90749550 -162507033 - AluY SINE Alu -5 306 1 183 156 0 0 chr2 90749772 90749804 -162506779 + T-rich Low_complexity Low_complexity 1 32 0 2531 229 48 29 chr2 90749813 90750653 -162505930 - L1MB7 LINE L1 -13 6171 5316 1413 229 124 4 chr2 90750654 90751131 -162505452 - L1MD2 LINE L1 -15 6344 5811 2421 59 0 0 chr2 90751890 90752178 -162504405 - AluY SINE Alu -23 288 1 314 183 92 53 chr2 90752474 90752605 -162503978 - L1ME3A LINE L1 -219 5951 5816 10506 115 38 31 chr2 90752636 90754116 -162502467 + Tigger1 DNA MER2_type 5 1501 -917 2435 71 0 0 chr2 90754116 90754412 -162502171 + AluY SINE Alu 1 296 -15 10506 115 38 31 chr2 90754412 90754746 -162501837 + Tigger1 DNA MER2_type 1501 1831 -587 490 252 94 13 chr2 90754746 90754980 -162501603 + L1MEc LINE L1 2194 2446 -3950 232 224 0 0 chr2 90755050 90755108 -162501475 - L1M4 LINE L1 -3485 2661 2604 894 180 6 38 chr2 90755121 90755304 -162501279 - AluJb SINE Alu -7 305 129 709 233 55 0 chr2 90755321 90755484 -162501099 - MER58C DNA MER1_type -39 176 5 374 239 9 0 chr2 90755488 90755597 -162500986 + L1MEc LINE L1 3967 4076 -2139 791 292 29 36 chr2 90755607 90756021 -162500562 - L1MDa LINE L1 -6103 437 27 2254 73 3 20 chr2 90756306 90756607 -162499976 - AluY SINE Alu -15 296 1 1570 179 4 4 chr2 90756768 90757025 -162499558 + AluJb SINE Alu 40 296 -16 495 262 169 6 chr2 90757897 90758080 -162498503 - MIR SINE MIR 0 262 50 2251 107 0 10 chr2 90759239 90759538 -162497045 - AluSx SINE Alu -16 296 1 807 200 71 13 chr2 90759875 90760030 -162496553 - FAM SINE Alu -21 164 1 2115 156 0 0 chr2 90761161 90761469 -162495114 + AluSx SINE Alu 2 309 -3 336 48 0 0 chr2 90761469 90761511 -162495072 + (TA)n Simple_repeat Simple_repeat 2 43 0 22 0 0 0 chr2 90761613 90761635 -162494948 + AT_rich Low_complexity Low_complexity 1 22 0 293 96 22 0 chr2 90762023 90762080 -162494503 - Alu SINE Alu -264 44 1 25 31 0 0 chr2 90762710 90762742 -162493841 + AT_rich Low_complexity Low_complexity 1 32 0 235 289 89 52 chr2 90763188 90763323 -162493260 - L2 LINE L2 -505 2809 2670 332 293 107 14 chr2 90763938 90764078 -162492505 - MIR SINE MIR -56 206 54 2324 74 0 29 chr2 90764666 90764975 -162491608 - AluY SINE Alu -11 300 1 578 142 149 40 chr2 90765018 90765166 -162491417 - MER3 DNA MER1_type -21 188 25 2134 125 0 31 chr2 90765292 90765612 -162490971 - AluSx SINE Alu -2 310 1 1982 113 51 14 chr2 90765773 90766065 -162490518 - AluSg SINE Alu -7 303 1 414 214 31 10 chr2 90766422 90766520 -162490063 - L1ME1 LINE L1 -50 6116 6017 1747 224 31 4 chr2 90766525 90766976 -162489607 - L1MD1 LINE L1 -383 5859 5397 1364 228 94 17 chr2 90766983 90767513 -162489070 - L1MD1 LINE L1 -880 5266 4696 906 107 0 0 chr2 90767531 90767652 -162488931 - AluSg/x SINE Alu -8 302 182 330 249 189 45 chr2 90767768 90767996 -162488587 - L1M4 LINE L1 -744 5402 5129 2177 77 0 17 chr2 90767996 90768307 -162488276 - AluY SINE Alu 0 306 1 330 249 189 45 chr2 90768307 90768342 -162488241 - L1M4 LINE L1 -1017 5129 5100 25 31 0 0 chr2 90768946 90768978 -162487605 + AT_rich Low_complexity Low_complexity 1 32 0 199 192 77 19 chr2 90769301 90769353 -162487230 - L3 LINE CR1 -1088 489 435 241 289 89 52 chr2 90769414 90769549 -162487034 - L2 LINE L2 -505 2809 2670 347 319 76 14 chr2 90770188 90770332 -162486251 - MIR SINE MIR -56 206 54 2316 75 3 3 chr2 90770922 90771214 -162485369 - AluY SINE Alu -19 292 1 585 130 137 41 chr2 90771245 90771391 -162485192 - MER3 DNA MER1_type -21 188 29 2152 125 0 31 chr2 90771530 90771850 -162484733 - AluSx SINE Alu -2 310 1 2044 109 48 10 chr2 90772015 90772308 -162484275 - AluSg SINE Alu -6 304 1 428 204 31 10 chr2 90772667 90772765 -162483818 - L1ME1 LINE L1 -50 6116 6017 * 1803 217 37 4 chr2 90772761 90773221 -162483362 - L1MD1 LINE L1 -371 5871 5397 1329 232 94 17 chr2 90773228 90773758 -162482825 - L1MD1 LINE L1 -880 5266 4696 2242 115 0 3 chr2 90773776 90774081 -162482502 - AluSx SINE Alu -8 304 1 28 0 0 0 chr2 90774157 90774185 -162482398 + AT_rich Low_complexity Low_complexity 1 28 0 3878 162 42 50 chr2 90774587 90774650 -162481933 - L1MB4 LINE L1 0 6180 6118 2217 88 11 0 chr2 90774650 90774935 -162481648 - AluSx SINE Alu -24 288 1 3878 162 42 50 chr2 90774935 90775862 -162480721 - L1MB4 LINE L1 -62 6118 5200 35 24 0 0 chr2 90775971 90776013 -162480570 + AT_rich Low_complexity Low_complexity 1 42 0 1762 132 0 4 chr2 90776080 90776331 -162480252 - AluJb SINE Alu -3 309 60 2647 201 37 12 chr2 90776717 90776938 -162479645 + L1ME1 LINE L1 5478 5692 -474 2273 87 27 0 chr2 90776938 90777236 -162479347 + AluSc SINE Alu 1 306 -3 2647 201 37 12 chr2 90777236 90777664 -162478919 + L1ME1 LINE L1 5692 6143 -23 1823 169 0 36 chr2 90777697 90778004 -162478579 + AluJo SINE Alu 1 296 -16 915 195 138 14 chr2 90778357 90778567 -162478016 - MER8 DNA MER2_type -3 236 1 687 258 84 46 chr2 90780219 90780585 -162475998 - L1ME1 LINE L1 -280 5884 5483 2454 70 0 22 chr2 90780585 90780901 -162475682 + AluY SINE Alu 1 309 -2 687 258 84 46 chr2 90780901 90781122 -162475461 - L1ME1 LINE L1 -681 5483 5272 21 36 0 0 chr2 90782777 90782805 -162473778 + AT_rich Low_complexity Low_complexity 1 28 0 803 126 8 8 chr2 90783173 90783292 -162473291 + FLAM_C SINE Alu 1 119 -24 1498 196 7 7 chr2 90783315 90783601 -162472982 + AluJo SINE Alu 1 286 -26 850 114 0 0 chr2 90783701 90783815 -162472768 - AluSq/x SINE Alu -199 114 1 23 0 0 0 chr2 90783890 90783913 -162472670 + AT_rich Low_complexity Low_complexity 1 23 0 3892 165 29 51 chr2 90784322 90784385 -162472198 - L1MB4 LINE L1 0 6180 6117 2203 88 11 0 chr2 90784385 90784670 -162471913 - AluSx SINE Alu -24 288 1 3892 165 29 51 chr2 90784670 90785601 -162470982 - L1MB4 LINE L1 -63 6117 5200 36 23 0 0 chr2 90785710 90785753 -162470830 + AT_rich Low_complexity Low_complexity 1 43 0 1787 128 0 4 chr2 90785820 90786071 -162470512 - AluJb SINE Alu -3 309 60 2561 208 97 15 chr2 90786423 90786652 -162469931 + L1ME1 LINE L1 5431 5640 -526 2300 86 27 0 chr2 90786652 90786953 -162469630 + AluSc SINE Alu 1 309 0 2561 208 97 15 chr2 90786953 90787382 -162469201 + L1ME1 LINE L1 5640 6143 -23 1833 163 0 36 chr2 90787415 90787722 -162468861 + AluJo SINE Alu 1 296 -16 923 195 138 14 chr2 90788075 90788285 -162468298 - MER8 DNA MER2_type -3 236 1 778 241 100 77 chr2 90789922 90790286 -162466297 - L1ME3 LINE L1 -278 5884 5499 2593 41 0 25 chr2 90790286 90790605 -162465978 + AluY SINE Alu 1 311 0 778 241 100 77 chr2 90790605 90790868 -162465715 - L1ME3 LINE L1 -663 5499 5244 730 75 0 9 chr2 90791846 90791952 -162464631 - AluSq/x SINE Alu -208 105 1 594 245 175 20 chr2 90793156 90793396 -162463187 + MIR SINE MIR 5 262 0 711 191 32 0 chr2 90793406 90793563 -162463020 + MER104 DNA Tc2 7 168 -12 22 80 0 0 chr2 90795055 90795105 -162461478 + AT_rich Low_complexity Low_complexity 1 50 0 35 71 0 0 chr2 90795256 90795326 -162461257 + AT_rich Low_complexity Low_complexity 1 70 0 332 246 167 9 chr2 90795412 90795649 -162460934 - L1MC/D LINE L1 -299 5822 5536 7869 13 0 0 chr2 90796936 90798258 -162458325 + L1PA2 LINE L1 4830 6155 0 270 306 144 38 chr2 90798650 90798810 -162457773 - MIR SINE MIR -36 226 50 2247 96 10 3 chr2 90799293 90799594 -162456989 - AluSq SINE Alu -10 303 1 1712 204 56 54 chr2 90799627 90799774 -162456809 - L1ME2 LINE L1 0 6164 6019 2128 108 31 0 chr2 90799774 90800062 -162456521 - AluSg SINE Alu -13 297 1 1712 204 56 54 chr2 90800062 90800429 -162456154 - L1ME2 LINE L1 -145 6019 5649 2004 112 0 18 chr2 90800437 90800722 -162455861 - AluSx SINE Alu -32 280 1 582 238 182 16 chr2 90801923 90802161 -162454422 + MIR SINE MIR 5 262 0 697 204 32 0 chr2 90802171 90802328 -162454255 + MER104 DNA Tc2 7 168 -12 35 71 0 0 chr2 90804030 90804100 -162452483 + AT_rich Low_complexity Low_complexity 1 70 0 343 216 90 9 chr2 90804186 90804297 -162452286 - L1MC/D LINE L1 -1986 5822 5703 23 33 0 0 chr2 90805697 90805727 -162450856 + AT_rich Low_complexity Low_complexity 1 30 0 1125 126 40 0 chr2 90806088 90806263 -162450320 - AluSg/x SINE Alu -9 303 122 463 289 18 72 chr2 90807046 90807212 -162449371 + L2 LINE L2 2602 2758 -556 1361 219 114 12 chr2 90807226 90807618 -162448965 - LTR28 LTR ERV1 -197 439 1 1906 100 30 36 chr2 90807618 90807919 -162448664 - LTR28-int LTR ERV1 0 7091 6793 11358 240 24 32 chr2 90808076 90810841 -162445742 - MER52-int LTR ERV1 -2858 4233 1492 273 330 28 18 chr2 90810855 90810964 -162445619 - MER52-int LTR ERV1 -5928 1163 1054 1161 196 55 5 chr2 90811158 90811378 -162445205 - MER52-int LTR ERV1 -6663 428 198 2263 126 0 0 chr2 90811457 90811767 -162444816 - AluSx SINE Alu -2 310 1 3398 147 25 59 chr2 90811890 90812585 -162443998 - L1MB7 LINE L1 -25 6159 5489 443 230 101 6 chr2 90812582 90812760 -162443823 - L1MB7 LINE L1 -1168 4978 4784 * 23 54 0 0 chr2 90812977 90813014 -162443569 + AT_rich Low_complexity Low_complexity 1 37 0 363 346 0 10 chr2 90813016 90813120 -162443463 + L2 LINE L2 3138 3240 -32 21 36 0 0 chr2 90813479 90813507 -162443076 + AT_rich Low_complexity Low_complexity 1 28 0 2163 103 7 3 chr2 90814660 90814952 -162441631 - AluY SINE Alu -18 293 1 2005 143 0 3 chr2 90815140 90815448 -162441135 - AluSx SINE Alu -5 307 1 1928 122 18 0 chr2 90815834 90816112 -162440471 - AluSx SINE Alu -29 283 1 1979 95 4 0 chr2 90817176 90817428 -162439155 + AluSp SINE Alu 44 296 -17 2388 87 0 7 chr2 90817555 90817865 -162438718 + AluY SINE Alu 1 308 -3 643 250 111 41 chr2 90817924 90818168 -162438415 + MIR SINE MIR 1 261 -1 346 289 72 61 chr2 90819565 90819745 -162436838 - L2 LINE L2 -12 3301 3120 740 118 0 0 chr2 90820001 90820103 -162436480 + AluJ/FLAM SINE Alu 1 102 -210 1745 211 26 31 chr2 90820660 90820980 -162435603 + MER47B DNA MER2_type 17 336 -1987 2203 130 0 0 chr2 90820980 90821288 -162435295 - AluSx SINE Alu -4 308 1 1745 211 26 31 chr2 90821288 90821355 -162435228 + MER47B DNA MER2_type 336 402 -16 586 234 184 56 chr2 90822362 90822671 -162433912 - L1ME2 LINE L1 -10 6088 5735 1300 141 77 5 chr2 90822671 90822891 -162433692 - MER46A DNA MER2_type 0 236 1 586 234 184 56 chr2 90822891 90822902 -162433681 - L1ME2 LINE L1 -363 5735 5727 1268 254 31 26 chr2 90822917 90823314 -162433269 - L1ME2 LINE L1 -524 5574 5171 2495 57 3 0 chr2 90823314 90823613 -162432970 - AluY SINE Alu -11 300 1 1268 254 31 26 chr2 90823613 90823890 -162432693 - L1ME2 LINE L1 -927 5171 4897 759 177 67 30 chr2 90823899 90824063 -162432520 - MER68 LTR ERV1 -256 306 137 1151 288 48 23 chr2 90824076 90824517 -162432066 - L1ME2 LINE L1 -5520 550 99 611 178 204 7 chr2 90824537 90824689 -162431894 + MER58A DNA MER1_type 43 224 0 236 267 70 35 chr2 90824705 90824791 -162431792 - L1ME2 LINE L1 -5979 91 3 191 299 37 123 chr2 90824988 90825175 -162431408 - L2 LINE L2 0 3272 3102 818 145 8 0 chr2 90825208 90825332 -162431251 + AluSq/x SINE Alu 1 125 -188 1960 151 3 3 chr2 90825744 90826043 -162430540 + AluJb SINE Alu 5 303 -9 207 0 0 0 chr2 90826116 90826139 -162430444 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 1759 111 59 11 chr2 90826145 90826415 -162430168 - AluSx SINE Alu -29 283 1 22 0 0 0 chr2 90826956 90826978 -162429605 + AT_rich Low_complexity Low_complexity 1 22 0 2081 112 11 0 chr2 90826978 90827264 -162429319 - AluSg SINE Alu -18 292 4 1739 153 47 10 chr2 90828844 90829144 -162427439 + AluJo SINE Alu 1 311 -1 239 219 167 18 chr2 90829273 90829387 -162427196 + L1ME4a LINE L1 5989 6119 -2 2358 61 0 3 chr2 90829403 90829700 -162426883 - AluY SINE Alu -15 296 1 184 326 52 22 chr2 90830300 90830435 -162426148 + L2 LINE L2 1864 2002 -1312 1808 237 87 65 chr2 90830466 90831271 -162425312 - L1ME3A LINE L1 -31 6139 5317 1193 150 59 0 chr2 90831290 90831510 -162425073 - L1MB2 LINE L1 -2 6169 5937 356 246 136 40 chr2 90831528 90831800 -162424783 - L1ME3A LINE L1 -853 5293 4996 591 298 99 13 chr2 90831838 90832220 -162424363 - L1ME3A LINE L1 -1237 4909 4495 2299 48 17 0 chr2 90833218 90833507 -162423076 - AluY SINE Alu -17 294 1 180 125 0 0 chr2 90833658 90833690 -162422893 + (CATATA)n Simple_repeat Simple_repeat 2 33 0 2283 74 7 7 chr2 90835199 90835496 -162421087 - AluY SINE Alu -14 297 1 2309 75 10 3 chr2 90835649 90835942 -162420641 - AluY SINE Alu -14 297 3 2213 116 0 0 chr2 90835946 90836249 -162420334 - AluSx SINE Alu -9 303 1 287 305 102 0 chr2 90837399 90837527 -162419056 - L2 LINE L2 -5 3267 3127 1919 120 207 11 chr2 90838772 90839130 -162417453 - MSTA LTR MaLR 0 428 1 181 118 40 40 chr2 90840143 90840219 -162416364 + (TATAA)n Simple_repeat Simple_repeat 2 77 0 727 192 77 0 chr2 90841270 90841426 -162415157 - L1MB3 LINE L1 -7 6176 6009 331 181 42 0 chr2 90841429 90841501 -162415082 - L1MB3 LINE L1 -100 6083 6009 320 194 42 0 chr2 90841504 90841576 -162415007 - L1MB3 LINE L1 -100 6083 6009 308 141 14 70 chr2 90841579 90841650 -162414933 - L1MB3 LINE L1 -100 6083 6017 799 197 30 39 chr2 90841654 90841857 -162414726 - L1MB3 LINE L1 -100 6083 5883 1999 143 0 28 chr2 90842719 90843040 -162413543 - AluJb SINE Alu 0 312 1 393 266 18 0 chr2 90843088 90843201 -162413382 + MIR SINE MIR 82 196 -66 447 201 123 30 chr2 90843216 90843402 -162413181 - MIR SINE MIR -14 248 44 23 0 0 0 chr2 90843640 90843663 -162412920 + AT_rich Low_complexity Low_complexity 1 23 0 331 297 48 2 chr2 90844557 90844692 -162411891 + MER5A DNA MER1_type 1 157 -32 2254 104 3 0 chr2 90847312 90847610 -162408973 - AluSg SINE Alu -11 299 1 266 171 71 34 chr2 90847833 90847904 -162408679 - L1MB3 LINE L1 -577 5587 5514 189 0 0 0 chr2 90847914 90847935 -162408648 + (T)n Simple_repeat Simple_repeat 1 21 0 272 190 190 0 chr2 90847954 90848054 -162408529 + L1M4 LINE L1 3087 3205 -2941 557 313 75 26 chr2 90848409 90848972 -162407611 + L2 LINE L2 2452 3049 -223 239 311 19 19 chr2 90849046 90849149 -162407434 - MLT1L LTR MaLR -8 607 505 979 135 47 62 chr2 90849545 90849737 -162406846 + MER5A DNA MER1_type 1 189 0 304 270 42 74 chr2 90849857 90850046 -162406537 + L2 LINE L2 3122 3304 -9 24 32 0 0 chr2 90850659 90850690 -162405893 + AT_rich Low_complexity Low_complexity 1 31 0 539 268 137 34 chr2 90851658 90852237 -162404346 + L1MCa LINE L1 815 1629 -4797 252 0 0 0 chr2 90852367 90852395 -162404188 + (TA)n Simple_repeat Simple_repeat 1 28 0 1194 170 39 30 chr2 90852479 90852615 -162403968 + MER46A DNA MER2_type 1 141 -2590 2433 72 3 7 chr2 90852615 90852921 -162403662 + AluY SINE Alu 1 305 -6 1194 170 39 30 chr2 90852921 90853014 -162403569 + MER46A DNA MER2_type 141 232 -4 1481 222 35 27 chr2 90853849 90854219 -162402364 + MLT1A2 LTR MaLR 1 373 -1 1620 171 10 38 chr2 90856996 90857288 -162399295 - AluJo SINE Alu -28 284 1 30 45 0 0 chr2 90857288 90857332 -162399251 + AT_rich Low_complexity Low_complexity 1 44 0 321 268 0 0 chr2 90857564 90857646 -162398937 + L1MC4 LINE L1 6614 6695 -1347 1247 129 0 0 chr2 90857646 90857816 -162398767 + AluSg/x SINE Alu 125 294 -18 248 179 0 0 chr2 90858772 90858811 -162397772 + LTR65 LTR ERV1 1 39 -630 2923 123 30 26 chr2 90858814 90859312 -162397271 - L1P4 LINE L1 -392 5774 5275 1041 121 6 6 chr2 90859375 90859532 -162397051 - LTR2 LTR ERV1 -26 423 267 1263 227 25 1 chr2 90859644 90859951 -162396632 - Harlequin LTR ERV1 -2 7811 6559 788 117 0 0 chr2 90859954 90860065 -162396518 - Harlequin LTR ERV1 -2073 5740 5630 232 291 0 0 chr2 90860065 90860120 -162396463 - LTR2 LTR ERV1 -55 394 340 9258 156 24 36 chr2 90860121 90861774 -162394809 - HERVE LTR ERV1 -6179 1634 1 636 173 0 9 chr2 90861774 90861884 -162394699 - LTR2B LTR ERV1 0 490 382 253 33 0 0 chr2 90862008 90862038 -162394545 - LTR8A LTR ERV1 -697 30 1 346 230 105 26 chr2 90862243 90862395 -162394188 - MER103 DNA DNA -1 165 2 1274 265 53 28 chr2 90864319 90864828 -162391755 - L1ME4a LINE L1 -49 6072 5551 2270 108 3 0 chr2 90865962 90866258 -162390325 + AluSx SINE Alu 1 297 -15 1795 152 30 14 chr2 90868492 90868788 -162387795 - AluJb SINE Alu -11 301 1 37 23 0 0 chr2 90868793 90868837 -162387746 + AT_rich Low_complexity Low_complexity 1 44 0 2200 127 0 9 chr2 90870256 90870571 -162386012 - AluJo SINE Alu 0 312 1 254 95 24 0 chr2 90871448 90871490 -162385093 + (TC)n Simple_repeat Simple_repeat 1 43 0 570 221 28 7 chr2 90871814 90871959 -162384624 - MER69 DNA AcHobo -483 2043 1896 818 243 113 91 chr2 90871972 90872443 -162384140 - MLT1G LTR MaLR -115 480 1 2165 136 0 0 chr2 90872532 90872840 -162383743 + AluSx SINE Alu 1 308 -4 186 267 0 0 chr2 90873081 90873126 -162383457 + MIR SINE MIR 204 248 -14 2288 95 3 7 chr2 90873212 90873517 -162383066 - AluSx SINE Alu -8 304 1 1428 121 213 4 chr2 90873694 90873965 -162382618 - AluYa5 SINE Alu 0 301 1 279 0 0 0 chr2 90874200 90874231 -162382352 + (TG)n Simple_repeat Simple_repeat 2 32 0 441 224 43 9 chr2 90874416 90874532 -162382051 + L1ME4a LINE L1 5798 5917 -204 26 30 0 0 chr2 90875087 90875120 -162381463 + AT_rich Low_complexity Low_complexity 1 33 0 1862 183 149 79 chr2 90875626 90876036 -162380547 - L1MD2 LINE L1 0 6359 5902 2089 128 0 17 chr2 90876036 90876334 -162380249 - AluSx SINE Alu -19 293 1 1862 183 149 79 chr2 90876334 90876453 -162380130 - L1MD2 LINE L1 -457 5902 5793 545 159 0 0 chr2 90876453 90876541 -162380042 + MLT2D LTR ERVL 2 89 -325 2392 68 14 3 chr2 90876541 90876836 -162379747 - AluY SINE Alu -13 298 1 1127 97 0 7 chr2 90876837 90876982 -162379601 - AluYa5 SINE Alu -167 144 1 2017 96 27 109 chr2 90876983 90877349 -162379234 + MLT2D LTR ERVL 79 414 0 2408 190 53 26 chr2 90877349 90877750 -162378833 - L1MD2 LINE L1 -561 5798 5381 2248 149 95 3 chr2 90877750 90878140 -162378443 - MSTB LTR MaLR 0 426 1 2408 190 53 26 chr2 90878140 90878319 -162378264 - L1MD2 LINE L1 -978 5381 5208 1604 225 105 41 chr2 90878349 90878882 -162377701 + MLT1E3 LTR MaLR 58 624 0 1618 233 62 53 chr2 90878883 90879077 -162377506 - L1MD2 LINE L1 -931 5215 5024 2071 125 0 17 chr2 90879077 90879404 -162377179 - AluSx SINE Alu 0 322 1 1618 233 62 53 chr2 90879404 90881077 -162375506 - L1MD2 LINE L1 -1122 5024 3139 889 158 11 0 chr2 90882179 90882356 -162374227 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 299 287 139 9 chr2 90882359 90882474 -162374109 - L2 LINE L2 0 3272 3143 1839 165 0 0 chr2 90883049 90883316 -162373267 - AluSx SINE Alu -45 267 1 872 236 50 4 chr2 90883350 90883608 -162372975 + LTR37B LTR ERV1 197 466 -2 269 171 57 29 chr2 90884347 90884417 -162372166 + LTR37B LTR ERV1 4 75 -393 2132 107 0 14 chr2 90884637 90884928 -162371655 + AluSc SINE Alu 1 287 -22 306 153 0 0 chr2 90885656 90885715 -162370868 + (CA)n Simple_repeat Simple_repeat 2 60 0 876 158 0 33 chr2 90887179 90887331 -162369252 + AluJo SINE Alu 1 147 -165 462 171 0 0 chr2 90887652 90887728 -162368855 - LTR2 LTR ERV1 -34 415 340 370 135 0 0 chr2 90887729 90887781 -162368802 - HERVE LTR ERV1 -6179 1634 1583 364 127 0 0 chr2 90887781 90887836 -162368747 + LTR2B LTR ERV1 436 490 0 1526 219 103 5 chr2 90888897 90889285 -162367298 - L1MD2 LINE L1 -7 6746 6321 1429 162 0 0 chr2 90889285 90889513 -162367070 + AluJb SINE Alu 1 228 -84 4371 150 23 10 chr2 90889528 90890229 -162366354 - MER50 LTR ERV1 -24 710 1 338 183 28 0 chr2 90890229 90890292 -162366291 + AluJb SINE Alu 238 302 0 721 225 56 13 chr2 90890305 90890615 -162365968 - L1MD2 LINE L1 -427 6326 5850 289 172 35 11 chr2 90890751 90890820 -162365763 - L1MD2 LINE L1 -870 5670 5604 2200 110 0 0 chr2 90890820 90891120 -162365463 - AluSx SINE Alu -12 300 1 947 109 17 17 chr2 90891125 90891300 -162365283 + (TTTC)n Simple_repeat Simple_repeat 4 178 0 289 172 35 11 chr2 90891300 90891311 -162365272 - L1MD2 LINE L1 -939 5601 5582 194 190 0 35 chr2 90891313 90891371 -162365212 + CT-rich Low_complexity Low_complexity 3 58 0 * 376 130 29 0 chr2 90891368 90891437 -162365146 + C-rich Low_complexity Low_complexity 1 71 0 730 243 62 17 chr2 90891437 90891614 -162364969 - FAM SINE Alu 0 49 1 5420 205 61 35 chr2 90892096 90892857 -162363726 - L1MD2 LINE L1 -2217 4323 3583 1458 203 23 3 chr2 90892857 90893162 -162363421 - AluJo SINE Alu -1 311 1 5420 205 61 35 chr2 90893162 90895456 -162361127 - L1MD2 LINE L1 -2957 3583 1192 2317 259 50 45 chr2 90895472 90896022 -162360561 - L1MD2 LINE L1 -5784 756 200 1926 130 0 23 chr2 90896022 90896321 -162360262 + AluSx SINE Alu 1 292 -20 2317 259 50 45 chr2 90896321 90896504 -162360079 - L1MD2 LINE L1 -6340 200 19 1829 156 120 93 chr2 90896812 90897362 -162359221 + L1MD2 LINE L1 5793 6357 -2 538 169 75 26 chr2 90899124 90899286 -162357297 + L1MEc LINE L1 2210 2359 -3856 2398 92 68 0 chr2 90900563 90900901 -162355682 - THE1B LTR MaLR -3 361 1 553 267 37 51 chr2 90901805 90902022 -162354561 + L1MEc LINE L1 39 252 -6144 2371 84 3 0 chr2 90902758 90903067 -162353516 + AluSp SINE Alu 1 310 -3 209 137 39 0 chr2 90904193 90904244 -162352339 + GA-rich Low_complexity Low_complexity 4 56 0 2112 116 3 6 chr2 90904383 90904694 -162351889 - AluSg SINE Alu 0 310 1 1013 97 11 11 chr2 90904987 90905163 -162351420 + (TTTC)n Simple_repeat Simple_repeat 3 178 0 219 226 0 0 chr2 90905165 90905218 -162351365 + CT-rich Low_complexity Low_complexity 1 53 0 329 235 0 20 chr2 90905241 90905339 -162351244 + (CCCG)n Simple_repeat Simple_repeat 4 99 0 21 0 0 0 chr2 90905344 90905365 -162351218 + GC_rich Low_complexity Low_complexity 1 21 0 605 228 122 78 chr2 90906179 90906434 -162350149 + L2 LINE L2 3048 3313 0 475 322 174 35 chr2 90906789 90906916 -162349667 + L2 LINE L2 2013 2121 -1151 2083 114 0 3 chr2 90906916 90907213 -162349370 - AluSx SINE Alu -16 296 1 475 322 174 35 chr2 90907213 90908164 -162348419 + L2 LINE L2 2121 3262 -10 246 350 10 10 chr2 90908664 90908767 -162347816 + MIR3 SINE MIR 89 191 -17 217 261 194 56 chr2 90909180 90909360 -162347223 + MIR SINE MIR 58 262 0 2355 69 10 0 chr2 90909457 90909760 -162346823 - AluY SINE Alu -5 306 1 456 192 48 56 chr2 90910498 90910623 -162345960 + MIR SINE MIR 98 221 -41 1462 146 9 0 chr2 90911664 90911897 -162344686 - L1MB2 LINE L1 -3 6168 5934 3004 120 16 36 chr2 90911897 90912513 -162344070 - MER4E LTR ERV1 0 766 2 2765 137 26 42 chr2 90912513 90912659 -162343924 - L1MB2 LINE L1 -245 5938 5791 2445 156 14 105 chr2 90912659 90912868 -162343715 + MLT2B1 LTR ERVL 2 228 -292 2357 58 0 7 chr2 90912868 90913160 -162343423 + AluY SINE Alu 1 290 -21 2445 156 14 105 chr2 90913160 90913519 -162343064 + MLT2B1 LTR ERVL 228 518 -2 2765 137 26 42 chr2 90913519 90913877 -162342706 - L1MB2 LINE L1 -392 5791 5442 957 178 0 0 chr2 90913981 90914138 -162342445 + FAM SINE Alu 1 157 -18 219 36 0 0 chr2 90914140 90914168 -162342415 + (CCAA)n Simple_repeat Simple_repeat 2 29 0 577 274 84 0 chr2 90914873 90915063 -162341520 + MIR SINE MIR 37 242 -20 1816 176 24 42 chr2 90915079 90915460 -162341123 + MSTD LTR MaLR 1 374 -22 2136 103 0 0 chr2 90915927 90916218 -162340365 - AluSx SINE Alu -21 291 1 184 158 105 0 chr2 90916560 90916598 -162339985 - MIR SINE MIR -118 144 103 1821 118 28 17 chr2 90918268 90918575 -162338008 + AluSx SINE Alu 1 312 0 2312 210 66 30 chr2 90918858 90918902 -162337681 - L1ME1 LINE L1 -7 6159 6118 1980 107 23 13 chr2 90918902 90919202 -162337381 + AluSp SINE Alu 11 313 0 2312 210 66 30 chr2 90919202 90919747 -162336836 - L1ME1 LINE L1 -48 6118 5549 198 0 0 0 chr2 90921500 90921522 -162335061 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 267 300 0 0 chr2 90921679 90921739 -162334844 - L2 LINE L2 -11 3261 3202 1332 307 97 30 chr2 90922378 90923331 -162333252 + L2 LINE L2 2290 3312 -1 695 199 7 7 chr2 90924070 90924216 -162332367 + LTR37B LTR ERV1 7 152 -316 521 29 0 15 chr2 90924285 90924353 -162332230 + (TTCCC)n Simple_repeat Simple_repeat 4 70 0 2375 89 71 0 chr2 90925121 90925458 -162331125 - THE1B LTR MaLR -3 361 1 2147 125 0 10 chr2 90927066 90927377 -162329206 - AluSx SINE Alu -4 308 1 1835 148 13 7 chr2 90927587 90927976 -162328607 + AluJb SINE Alu 1 391 0 225 94 0 0 chr2 90928078 90928110 -162328473 + (A)n Simple_repeat Simple_repeat 1 32 0 255 250 15 15 chr2 90928503 90928571 -162328012 - L2 LINE L2 0 3313 3246 1306 231 37 64 chr2 90928694 90929071 -162327512 - MLT1A2 LTR MaLR 0 374 8 537 278 241 21 chr2 90929204 90929689 -162326894 - L2 LINE L2 -343 2971 2380 1999 123 38 0 chr2 90929701 90929994 -162326589 + MLT2B1 LTR ERVL 1 304 -216 709 164 8 15 chr2 90929998 90930132 -162326451 + THE1C LTR MaLR 1 133 -242 268 129 32 65 chr2 90930183 90930276 -162326307 + C-rich Low_complexity Low_complexity 6 95 0 268 256 34 26 chr2 90930574 90930691 -162325892 - AluSq/x SINE Alu -184 118 1 4928 131 55 12 chr2 90930691 90931514 -162325069 - Tigger1 DNA MER2_type -1537 881 24 751 260 101 48 chr2 90932193 90932551 -162324032 + MLT1J LTR MaLR 86 462 -49 427 297 55 35 chr2 90932755 90932900 -162323683 - MER91B DNA MER1_type 0 190 43 909 206 30 27 chr2 90933511 90933773 -162322810 + AluSq SINE Alu 41 303 -10 1986 86 57 0 chr2 90933773 90934053 -162322530 + Tigger1 DNA MER2_type 878 1173 -1245 4463 34 0 5 chr2 90934060 90934625 -162321958 - L1P LINE L1 -2787 3359 2798 16749 28 15 1 chr2 90934625 90936621 -162319962 + L1P LINE L1 3357 5381 -765 6622 122 10 12 chr2 90936721 90937728 -162318855 + Tigger1 DNA MER2_type 1414 2418 0 238 333 75 25 chr2 90938525 90938645 -162317938 + MIR SINE MIR 96 221 -41 186 323 121 0 chr2 90938702 90938801 -162317782 - L2 LINE L2 -963 2351 2241 855 161 16 99 chr2 90938864 90939056 -162317527 - MLT2B2 LTR ERVL -3 512 337 1844 202 6 6 chr2 90939078 90939424 -162317159 - THE1B LTR MaLR 0 364 19 1935 144 3 0 chr2 90939647 90939938 -162316645 + AluSx SINE Alu 1 292 -20 329 231 46 65 chr2 90940502 90940610 -162315973 + LTR48B LTR ERV1 1 106 -538 * 1144 236 43 89 chr2 90940577 90940895 -162315688 + MER39 LTR ERV1 260 550 -157 2000 145 3 0 chr2 90940895 90941205 -162315378 - AluSx SINE Alu -1 311 1 1144 236 43 89 chr2 90941205 90941356 -162315227 + MER39 LTR ERV1 550 707 0 1004 163 5 5 chr2 90942021 90942205 -162314378 - LTR37A LTR ERV1 -21 405 222 1437 90 0 0 chr2 90942746 90942934 -162313649 + AluY SINE Alu 102 289 -22 242 355 114 32 chr2 90942995 90943117 -162313466 - L2 LINE L2 -1 3271 3160 2018 203 97 7 chr2 90943117 90943580 -162313003 + MLT1D LTR MaLR 1 505 0 242 355 114 32 chr2 90943580 90943677 -162312906 - L2 LINE L2 -112 3160 3034 1216 174 14 14 chr2 90943831 90944049 -162312534 - MER66B LTR ERV1 -268 218 1 363 366 0 0 chr2 90944992 90945134 -162311449 + G-rich Low_complexity Low_complexity 1 142 0 2122 103 3 7 chr2 90945563 90945864 -162310719 - AluSx SINE Alu -12 300 1 237 133 0 0 chr2 90945890 90945935 -162310648 + L1MA5 LINE L1 6256 6300 0 937 279 22 9 chr2 90946849 90947175 -162309408 - L1ME2 LINE L1 -140 6026 5712 396 223 205 0 chr2 90947646 90947758 -162308825 - MIR SINE MIR -66 196 62 1882 275 194 12 chr2 90947827 90949103 -162307480 - L2 LINE L2 -15 3298 1787 338 24 0 0 chr2 90949148 90949189 -162307394 + AluSp SINE Alu 85 125 -178 369 0 53 18 chr2 90949299 90949356 -162307227 + (TTTC)n Simple_repeat Simple_repeat 2 60 0 470 280 37 26 chr2 90949898 90950087 -162306496 + MARNA DNA Mariner 288 478 -108 2047 103 3 0 chr2 90950848 90951130 -162305453 + AluSx SINE Alu 9 291 -21 540 241 72 6 chr2 90951163 90951329 -162305254 + MER45A DNA AcHobo 2 178 0 445 231 31 31 chr2 90952516 90952646 -162303937 + MER103 DNA DNA 25 154 -12 2369 120 42 28 chr2 90952723 90953149 -162303434 - L1MA8 LINE L1 0 6291 5860 346 331 108 16 chr2 90953225 90953416 -162303167 + MIR SINE MIR 21 227 -35 3412 168 90 22 chr2 90953521 90954188 -162302395 - LTR62 LTR ERVK 0 719 8 33 43 0 0 chr2 90954729 90954776 -162301807 + AT_rich Low_complexity Low_complexity 1 47 0 186 318 30 0 chr2 90957567 90957633 -162298950 - MER5B DNA MER1_type -105 73 6 1894 198 25 14 chr2 90957744 90958112 -162298471 + MLT1C LTR MaLR 1 372 -95 7895 115 38 25 chr2 90958150 90958500 -162298083 + HSMAR2 DNA Mariner 2 346 -956 2022 114 3 32 chr2 90958500 90958808 -162297775 + AluSx SINE Alu 1 299 -13 7895 115 38 25 chr2 90958808 90959741 -162296842 + HSMAR2 DNA Mariner 346 1302 0 1875 199 60 26 chr2 90960225 90960677 -162295906 + MLT1C LTR MaLR 1 467 0 623 143 0 7 chr2 90964018 90964158 -162292425 + (TG)n Simple_repeat Simple_repeat 2 140 0 186 208 0 0 chr2 90964222 90964275 -162292308 + (TG)n Simple_repeat Simple_repeat 2 54 0 276 215 0 51 chr2 90964423 90964502 -162292081 - L2 LINE L2 -6 3266 3192 485 289 60 0 chr2 90964602 90964768 -162291815 - MLT1I LTR MaLR -2 407 232 797 216 12 8 chr2 90964857 90965026 -162291557 - MIR SINE MIR -67 141 10 2223 89 6 16 chr2 90966326 90966641 -162289942 + AluSp SINE Alu 1 312 -1 1533 251 51 40 chr2 90966883 90967148 -162289435 - L1MEc LINE L1 -5178 1218 958 2123 118 0 3 chr2 90967148 90967452 -162289131 + AluSq SINE Alu 11 313 0 1533 251 51 40 chr2 90967452 90967792 -162288791 - L1MEc LINE L1 -5438 958 606 286 254 140 0 chr2 90967801 90967915 -162288668 - L2 LINE L2 -2507 807 678 1036 123 6 6 chr2 90967931 90968110 -162288473 + (TTCC)n Simple_repeat Simple_repeat 1 179 0 573 168 0 0 chr2 90968115 90968222 -162288361 + CT-rich Low_complexity Low_complexity 2 108 0 699 215 48 98 chr2 90968246 90968389 -162288194 + L1MC4 LINE L1 7636 7785 -257 2030 127 3 3 chr2 90968389 90968688 -162287895 + AluSx SINE Alu 1 299 -13 699 215 48 98 chr2 90968688 90968879 -162287704 + L1MC4 LINE L1 7785 7953 -89 3493 186 33 10 chr2 90969661 90970334 -162286249 + L1MB7 LINE L1 5481 6168 -16 1052 281 90 32 chr2 90970866 90971389 -162285194 - L1MC4a LINE L1 -1770 6038 5486 266 135 0 33 chr2 90971389 90971444 -162285139 + Alu SINE Alu 2 41 -259 1681 218 50 31 chr2 90971473 90971506 -162285077 + MER63B DNA MER1_type 6 37 -1025 195 42 0 0 chr2 90971506 90971530 -162285053 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 1681 218 50 31 chr2 90971530 90971919 -162284664 + MER63B DNA MER1_type 37 436 0 298 274 162 17 chr2 90971925 90972104 -162284479 - L1MC4a LINE L1 -2342 5466 5262 180 111 0 0 chr2 90972189 90972216 -162284367 + (T)n Simple_repeat Simple_repeat 1 27 0 2124 99 0 40 chr2 90972270 90972594 -162283989 - AluSx SINE Alu -1 311 1 1672 204 79 3 chr2 90973008 90973376 -162283207 - MSTD LTR MaLR 0 396 1 221 143 0 48 chr2 90973802 90973844 -162282739 + MIR SINE MIR 209 248 -14 378 292 208 10 chr2 90974088 90974290 -162282293 - MIR SINE MIR -1 261 20 182 61 0 30 chr2 90975074 90975107 -162281476 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 2802 76 3 3 chr2 90975351 90975706 -162280877 - THE1A LTR MaLR 0 355 1 11362 99 16 3 chr2 90975706 90977265 -162279318 - THE1A-int LTR MaLR 0 1580 1 2500 81 35 6 chr2 90977265 90977610 -162278973 - THE1A LTR MaLR 0 355 1 202 139 0 23 chr2 90978823 90978866 -162277717 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 477 309 98 10 chr2 90979172 90979376 -162277207 + MIR SINE MIR 41 262 0 315 0 0 0 chr2 90979387 90979422 -162277161 + (CAT)n Simple_repeat Simple_repeat 1 35 0 1485 181 0 11 chr2 90979889 90980159 -162276424 + AluJb SINE Alu 1 267 -45 249 109 0 0 chr2 90980173 90980219 -162276364 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 201 159 0 0 chr2 90980278 90980322 -162276261 + CT-rich Low_complexity Low_complexity 1 44 0 315 0 0 0 chr2 90980339 90980374 -162276209 + (TTCC)n Simple_repeat Simple_repeat 1 35 0 842 244 12 0 chr2 90980374 90980546 -162276037 - FRAM SINE Alu -1 175 2 184 317 113 42 chr2 90980704 90980846 -162275737 - L2 LINE L2 -4 3309 3158 200 283 0 0 chr2 90980935 90980981 -162275602 + (TG)n Simple_repeat Simple_repeat 2 47 0 347 314 40 6 chr2 90980990 90981165 -162275418 - L2 LINE L2 -291 3022 2842 861 160 67 5 chr2 90982870 90983064 -162273519 + L1MD1 LINE L1 1864 2069 -4471 800 215 68 32 chr2 90983080 90983359 -162273224 + L1MD1 LINE L1 2111 2399 -4141 * 5130 194 70 19 chr2 90983334 90983598 -162272985 + L1MC3 LINE L1 6983 7232 -947 360 0 0 0 chr2 90983598 90983638 -162272945 + (TG)n Simple_repeat Simple_repeat 1 40 0 5130 194 70 19 chr2 90983638 90984504 -162272079 + L1MC3 LINE L1 7232 8171 -8 1584 147 8 4 chr2 90984514 90984772 -162271811 + AluSx SINE Alu 33 291 -21 4379 192 46 39 chr2 90984781 90985020 -162271563 + L1MD1 LINE L1 5403 5639 -997 2121 71 50 0 chr2 90985020 90985301 -162271282 - AluSc SINE Alu -14 295 1 4379 192 46 39 chr2 90985301 90986122 -162270461 + L1MD1 LINE L1 5639 6475 -161 2074 118 3 10 chr2 90986122 90986436 -162270147 - AluSx SINE Alu 0 312 1 4379 192 46 39 chr2 90986436 90986600 -162269983 + L1MD1 LINE L1 6475 6636 0 330 309 9 9 chr2 90986616 90986726 -162269857 - HAL1 LINE L1 -104 2403 2294 318 263 90 45 chr2 90986815 90986948 -162269635 - HAL1 LINE L1 -1553 954 816 588 132 11 0 chr2 90986949 90987040 -162269543 + AluS SINE Alu 2 93 -219 1493 147 113 15 chr2 90987061 90987326 -162269257 - MSTA LTR MaLR 0 428 138 1432 211 43 4 chr2 91188816 91189096 -162067487 - AluJb SINE Alu -21 291 1 72 58 0 0 chr2 91189245 91189366 -162067217 + AT_rich Low_complexity Low_complexity 1 121 0 25 0 0 0 chr2 91189534 91189559 -162067024 + AT_rich Low_complexity Low_complexity 1 25 0 289 258 109 62 chr2 91189661 91189889 -162066694 - L1MC4 LINE L1 -89 7953 7737 1615 155 12 8 chr2 91189889 91190141 -162066442 - AluJo SINE Alu -19 293 41 289 258 109 62 chr2 91190141 91190408 -162066175 - L1MC4 LINE L1 -305 7737 7333 1960 198 3 3 chr2 91190409 91190768 -162065815 - MLT1A1 LTR MaLR -6 359 1 240 218 39 64 chr2 91190768 91190846 -162065737 - L1MC5 LINE L1 -630 7331 7256 * 555 262 50 36 chr2 91190817 91191274 -162065309 - L1MC4 LINE L1 -626 7416 6960 2241 121 0 6 chr2 91191819 91192133 -162064450 - AluSx SINE Alu 0 312 1 1086 152 34 34 chr2 91192184 91192388 -162064195 + MER3 DNA MER1_type 2 205 -4 313 182 0 45 chr2 91192651 91192717 -162063866 - MER4B LTR ERV1 -547 63 1 656 261 140 41 chr2 91194902 91195503 -162061080 + L1ME4a LINE L1 5362 6024 -97 480 256 13 58 chr2 91195628 91195784 -162060799 + MIR SINE MIR 49 197 -65 1765 173 7 7 chr2 91197598 91197904 -162058679 - AluJo SINE Alu -6 306 1 310 195 39 0 chr2 91198005 91198082 -162058501 + L1ME LINE L1 5774 5853 -268 194 315 0 0 chr2 91200190 91200244 -162056339 - MIR SINE MIR -68 140 87 926 252 68 11 chr2 91200423 91200689 -162055894 + MLT1C LTR MaLR 187 467 0 956 224 46 12 chr2 91200713 91200972 -162055611 - MLT1C LTR MaLR 0 467 200 1499 156 8 0 chr2 91200972 91201209 -162055374 - ERVL LTR ERVL -1363 4401 4163 2653 156 15 0 chr2 91201220 91201630 -162054953 - MSTB LTR MaLR -10 416 1 830 163 56 12 chr2 91201630 91201790 -162054793 - ERVL LTR ERVL -1598 4166 4000 615 243 59 120 chr2 91202265 91202673 -162053910 - MLT1J2 LTR MaLR -15 435 59 221 316 53 0 chr2 91202837 91202932 -162053651 + L2 LINE L2 3208 3307 -6 256 313 48 0 chr2 91203014 91203097 -162053486 + L2 LINE L2 2395 2481 -833 322 135 0 0 chr2 91203106 91203158 -162053425 - MLT1F LTR MaLR -1 541 490 452 107 13 0 chr2 91203163 91203238 -162053345 - MLT1F LTR MaLR -185 357 282 465 232 187 0 chr2 91203326 91203481 -162053102 - L2 LINE L2 0 3313 3130 1714 234 60 1 chr2 91203486 91203935 -162052648 - MLT1F LTR MaLR -58 509 1 381 324 51 17 chr2 91203952 91204128 -162052455 + L2 LINE L2 2494 2675 -639 1081 264 90 38 chr2 91204164 91204760 -162051823 - L2 LINE L2 0 3313 2681 276 292 0 14 chr2 91204784 91204856 -162051727 + L2 LINE L2 2716 2786 -528 27 0 0 0 chr2 91204860 91204887 -162051696 + AT_rich Low_complexity Low_complexity 1 27 0 441 0 0 0 chr2 91205064 91205113 -162051470 + (TG)n Simple_repeat Simple_repeat 2 50 0 588 14 0 0 chr2 91205354 91205423 -162051160 + (TTTC)n Simple_repeat Simple_repeat 4 72 0 276 292 0 14 chr2 91205580 91205652 -162050931 + L2 LINE L2 2716 2786 -528 27 0 0 0 chr2 91205656 91205683 -162050900 + AT_rich Low_complexity Low_complexity 1 27 0 405 0 0 0 chr2 91205858 91205903 -162050680 + (TG)n Simple_repeat Simple_repeat 2 46 0 192 224 0 0 chr2 91206099 91206148 -162050435 - MER5A DNA MER1_type -80 109 61 1974 144 3 0 chr2 91206148 91206620 -162049963 - AluSx SINE Alu 0 473 1 242 216 0 0 chr2 91206620 91206671 -162049912 - MER5A DNA MER1_type -113 76 26 735 261 12 0 chr2 91206701 91206862 -162049721 - MER5B DNA MER1_type -14 164 2 1025 13 76 0 chr2 91207982 91208140 -162048443 + CT-rich Low_complexity Low_complexity 1 170 0 2042 121 4 0 chr2 91208144 91208424 -162048159 - AluSx SINE Alu -31 281 1 234 235 0 0 chr2 91208424 91208475 -162048108 - MER5A DNA MER1_type -113 76 26 742 261 12 0 chr2 91208505 91208666 -162047917 - MER5B DNA MER1_type -14 164 2 259 313 12 0 chr2 91209869 91209949 -162046634 - MIR SINE MIR -61 147 67 457 272 74 36 chr2 91210167 91210476 -162046107 - L1MC5 LINE L1 -140 7821 7501 9607 242 50 9 chr2 91210660 91212833 -162043750 + L1PBa LINE L1 2719 5054 -1808 276 77 0 0 chr2 91212833 91212872 -162043711 + (CA)n Simple_repeat Simple_repeat 2 40 0 9607 242 50 9 chr2 91212872 91213745 -162042838 + L1PBa LINE L1 5054 5890 -972 28 29 0 0 chr2 91213848 91213883 -162042700 + AT_rich Low_complexity Low_complexity 1 35 0 1359 168 69 0 chr2 91214427 91214730 -162041853 - MER33 DNA MER1_type 0 324 1 189 0 0 0 chr2 91214940 91214961 -162041622 + (A)n Simple_repeat Simple_repeat 1 21 0 304 269 25 67 chr2 91215073 91215192 -162041391 - MIR SINE MIR -62 146 33 414 75 30 0 chr2 91217437 91217504 -162039079 - L1MB4 LINE L1 0 6180 6112 376 269 24 36 chr2 91219053 91219220 -162037363 - HAL1 LINE L1 -19 2488 2324 3447 239 125 41 chr2 91219760 91221140 -162035443 - HAL1 LINE L1 -19 2488 993 3482 181 30 20 chr2 91221150 91221848 -162034735 - L1ME1 LINE L1 -5 6161 5457 888 235 50 6 chr2 91221851 91222169 -162034414 - HAL1 LINE L1 -1507 1000 638 785 331 25 11 chr2 91222204 91222485 -162034098 - MLT1K LTR MaLR -302 286 2 258 306 62 98 chr2 91222565 91222951 -162033632 + L2 LINE L2 2892 3263 -9 279 180 0 0 chr2 91223245 91223295 -162033288 + L2 LINE L2 3255 3304 -9 27 49 0 0 chr2 91223856 91223897 -162032686 + AT_rich Low_complexity Low_complexity 1 41 0 980 260 45 4 chr2 91224509 91224751 -162031832 + MIR SINE MIR 1 252 -10 192 268 113 14 chr2 91224865 91224936 -162031647 + MIR SINE MIR 133 210 -52 259 145 72 0 chr2 91225205 91225274 -162031309 + (TA)n Simple_repeat Simple_repeat 1 74 0 924 206 0 12 chr2 91225377 91225547 -162031036 + AluJo SINE Alu 1 168 -144 2428 228 74 3 chr2 91225548 91226167 -162030416 + L1ME2 LINE L1 5491 6153 -11 1109 139 0 44 chr2 91226228 91226408 -162030175 + AluSp SINE Alu 131 302 -11 1765 183 7 10 chr2 91226535 91226835 -162029748 - AluJo SINE Alu -13 299 1 2531 206 103 39 chr2 91226836 91227687 -162028896 - L1ME1 LINE L1 -945 5201 4296 539 281 6 37 chr2 91228054 91228218 -162028365 - MIR SINE MIR -64 198 40 21 36 0 0 chr2 91228713 91228741 -162027842 + AT_rich Low_complexity Low_complexity 1 28 0 194 279 152 0 chr2 91229179 91229258 -162027325 - L2 LINE L2 -2 3270 3180 268 349 95 57 chr2 91229463 91229778 -162026805 - L2 LINE L2 0 3272 2946 525 247 49 48 chr2 91230194 91230605 -162025978 - LTR33 LTR ERVL -4 517 38 431 288 26 61 chr2 91231206 91231609 -162024974 - L1MC/D LINE L1 -843 5516 5254 308 394 107 24 chr2 91231676 91232095 -162024488 + L2 LINE L2 2286 2739 -575 581 184 5 130 chr2 91233693 91233787 -162022796 + L1ME1 LINE L1 6000 6104 -62 369 0 0 0 chr2 91233787 91233828 -162022755 + (TG)n Simple_repeat Simple_repeat 2 42 0 581 184 5 130 chr2 91233828 91233878 -162022705 + L1ME1 LINE L1 6104 6119 -47 2310 96 0 3 chr2 91233878 91234179 -162022404 + AluSx SINE Alu 1 300 -12 581 184 5 130 chr2 91234179 91234218 -162022365 + L1ME1 LINE L1 6119 6161 -5 2744 104 5 2 chr2 91235020 91235413 -162021170 + MER1A DNA MER1_type 135 528 -1 351 254 107 8 chr2 91235462 91235584 -162020999 - MIR SINE MIR -96 166 33 183 139 0 0 chr2 91235659 91235695 -162020888 + (TGGGGG)n Simple_repeat Simple_repeat 6 41 0 1971 144 0 7 chr2 91236019 91236326 -162020257 - AluSx SINE Alu 0 305 1 259 280 101 39 chr2 91236705 91236912 -162019671 - MLT1K LTR MaLR -2 586 367 243 177 35 44 chr2 91237489 91237602 -162018981 + CT-rich Low_complexity Low_complexity 1 112 0 181 303 30 0 chr2 91237624 91237690 -162018893 - L2 LINE L2 -1 3271 3204 316 256 335 0 chr2 91238024 91238114 -162018469 + MIR SINE MIR 28 87 -175 2736 115 47 0 chr2 91238114 91238523 -162018060 - MSTC LTR MaLR 0 428 1 316 256 335 0 chr2 91238523 91238553 -162018030 + MIR SINE MIR 87 106 -156 504 0 0 0 chr2 91238553 91238609 -162017974 + (TA)n Simple_repeat Simple_repeat 1 56 0 316 256 335 0 chr2 91238609 91238663 -162017920 + MIR SINE MIR 106 262 0 1731 159 18 18 chr2 91239032 91239308 -162017275 - AluJo SINE Alu -36 276 1 5736 30 6 0 chr2 91240235 91240964 -162015619 - L1PA2 LINE L1 -777 5369 4637 6976 16 0 1 chr2 91240964 91241759 -162014824 + L1PA2 LINE L1 5353 6153 -2 1043 267 18 40 chr2 91241857 91242254 -162014329 - MLT1J LTR MaLR -115 396 9 242 87 22 0 chr2 91242416 91242462 -162014121 + (GGA)n Simple_repeat Simple_repeat 2 48 0 266 210 97 0 chr2 91242507 91242569 -162014014 - MIR SINE MIR -87 175 108 398 269 154 32 chr2 91242657 91242969 -162013614 - MLT1L LTR MaLR -15 600 251 608 121 0 86 chr2 91243130 91243246 -162013337 + FLAM_A SINE Alu 16 121 -21 307 212 0 91 chr2 91243248 91243347 -162013236 + L1MC4 LINE L1 6614 6703 -1339 252 0 0 0 chr2 91243347 91243375 -162013208 + (TA)n Simple_repeat Simple_repeat 2 29 0 216 363 128 64 chr2 91243486 91243690 -162012893 - L2 LINE L2 -10 3262 3046 192 351 85 0 chr2 91243746 91243840 -162012743 + L2 LINE L2 3189 3290 -23 2149 129 51 14 chr2 91245759 91246130 -162010453 + MSTB1 LTR MaLR 1 385 -47 230 385 26 68 chr2 91246299 91246564 -162010019 - L2 LINE L2 -25 3247 2994 592 13 13 13 chr2 91247517 91247595 -162008988 + (TCTA)n Simple_repeat Simple_repeat 1 78 0 921 217 39 60 chr2 91248062 91248343 -162008240 + LTR16C LTR ERVL 216 490 -1 942 233 149 9 chr2 91249781 91250103 -162006480 - L1ME3A LINE L1 -23 6147 5781 566 206 58 13 chr2 91251103 91251258 -162005325 - MER112 DNA MER1_type -98 162 1 22 0 0 0 chr2 91251723 91251745 -162004838 + AT_rich Low_complexity Low_complexity 1 22 0 263 184 0 184 chr2 91252348 91252406 -162004177 - MER33 DNA MER1_type -2505 80 45 1786 169 7 14 chr2 91252406 91252696 -162003887 + AluJo SINE Alu 9 296 -16 263 184 0 184 chr2 91252696 91252735 -162003848 - MER33 DNA MER1_type -2540 45 1 24 53 0 0 chr2 91253957 91253995 -162002588 + AT_rich Low_complexity Low_complexity 1 38 0 755 241 11 0 chr2 91255082 91255256 -162001327 - L1MD2 LINE L1 -46 6313 6138 1043 181 6 0 chr2 91255321 91255492 -162001091 + FRAM SINE Alu 1 171 -5 2187 115 3 10 chr2 91255641 91255945 -162000638 - AluSg SINE Alu -8 302 1 2429 64 12 12 chr2 91256278 91256685 -161999898 - L1PA3 LINE L1 -4894 1252 718 * 32246 34 2 1 chr2 91256682 91261569 -161995014 + L1PA3 LINE L1 1263 6152 -3 304 276 32 45 chr2 91261600 91261756 -161994827 + L1MC5 LINE L1 7732 7885 -76 1647 170 53 36 chr2 91261892 91262501 -161994082 + L1M3 LINE L1 4945 5556 -624 392 152 0 13 chr2 91262501 91262580 -161994003 + L1MB3 LINE L1 6093 6170 -13 21 71 0 0 chr2 91262757 91262799 -161993784 + AT_rich Low_complexity Low_complexity 1 42 0 26 30 0 0 chr2 91262830 91262863 -161993720 + AT_rich Low_complexity Low_complexity 1 33 0 1602 184 7 10 chr2 91263466 91263754 -161992829 + AluJo SINE Alu 18 304 -8 431 311 97 22 chr2 91264353 91264674 -161991909 + L1ME LINE L1 36 380 -6016 4050 248 155 35 chr2 91265017 91265293 -161991290 + L1ME LINE L1 2435 2676 -3539 2181 107 0 19 chr2 91265293 91265603 -161990980 + AluSx SINE Alu 3 306 -6 4050 248 155 35 chr2 91265603 91266013 -161990570 + L1ME LINE L1 2676 3035 -3180 1256 120 105 5 chr2 91266013 91266222 -161990361 - MER30 DNA MER1_type 0 230 1 4050 248 155 35 chr2 91266222 91268024 -161988559 + L1ME LINE L1 3035 5241 -974 1711 99 0 0 chr2 91268024 91268245 -161988338 + AluY SINE Alu 81 301 -10 4050 248 155 35 chr2 91268245 91268306 -161988277 + L1ME LINE L1 5241 5293 -922 742 193 34 17 chr2 91268302 91268478 -161988105 + L1ME LINE L1 5546 5724 -509 * 213 167 42 0 chr2 91269189 91269237 -161987346 + CT-rich Low_complexity Low_complexity 2 51 0 552 286 45 7 chr2 91269432 91269586 -161986997 + MIR SINE MIR 17 176 -86 * 2628 169 75 20 chr2 91269582 91270219 -161986364 + L1MB7 LINE L1 5497 6168 -16 193 288 50 25 chr2 91270237 91270317 -161986266 + MIR SINE MIR 181 262 0 300 333 40 32 chr2 91270832 91270958 -161985625 - MIR SINE MIR -130 132 6 260 307 102 8 chr2 91272793 91272920 -161983663 + MIR SINE MIR 120 258 -4 331 329 71 19 chr2 91273737 91273892 -161982691 - MER5A DNA MER1_type -6 183 21 3683 219 15 41 chr2 91274651 91275054 -161981529 + L1PA16 LINE L1 5393 5805 -361 2203 165 59 10 chr2 91275054 91275460 -161981123 - MSTA LTR MaLR -2 426 1 3683 219 15 41 chr2 91275460 91275730 -161980853 + L1PA16 LINE L1 5805 6046 -120 1881 154 133 13 chr2 91275730 91276112 -161980471 - MSTA LTR MaLR 0 428 1 3683 219 15 41 chr2 91276112 91276222 -161980361 + L1PA16 LINE L1 6046 6157 -9 47 53 0 0 chr2 91276222 91276297 -161980286 + AT_rich Low_complexity Low_complexity 1 75 0 180 0 0 0 chr2 91276931 91276951 -161979632 + (TTCA)n Simple_repeat Simple_repeat 2 21 0 746 167 141 0 chr2 91277409 91277565 -161979018 + MER58A DNA MER1_type 34 211 -13 1851 86 0 4 chr2 91277852 91278122 -161978461 + AluY SINE Alu 39 307 0 21 57 0 0 chr2 91278764 91278799 -161977784 + AT_rich Low_complexity Low_complexity 1 35 0 449 326 8 8 chr2 91278806 91278935 -161977648 - MER5A DNA MER1_type -1 188 60 1095 201 39 46 chr2 91278939 91279351 -161977232 - LTR37A LTR ERV1 0 426 18 288 206 16 0 chr2 91279882 91279945 -161976638 - L1MA6 LINE L1 -14 6286 6223 880 204 35 3 chr2 91279981 91280181 -161976402 - L1MA6 LINE L1 -150 7425 7223 758 161 121 0 chr2 91280188 91280337 -161976246 + MSTA LTR MaLR 1 167 -261 648 219 20 20 chr2 91280330 91280481 -161976102 + MSTA LTR MaLR 278 428 0 * 9992 190 46 74 chr2 91280481 91282642 -161973941 - L1MA6 LINE L1 -510 7209 4941 1423 224 38 3 chr2 91282642 91282932 -161973651 - AluJo SINE Alu -5 307 8 9992 190 46 74 chr2 91282932 91284843 -161971740 - L1MA6 LINE L1 -2778 4941 2977 840 313 76 56 chr2 91284858 91285755 -161970828 - L1MA6 LINE L1 -4266 2299 1385 404 248 0 19 chr2 91285793 91285898 -161970685 - L1MA6 LINE L1 -6921 568 466 264 280 75 28 chr2 91286044 91286151 -161970432 + MIR SINE MIR 80 191 -71 922 210 72 47 chr2 91286500 91286845 -161969738 - MER67C LTR ERV1 -3 511 173 326 241 18 62 chr2 91286846 91286958 -161969625 - MLT1I LTR MaLR -240 169 63 241 154 115 0 chr2 91287070 91287122 -161969461 - L1M2 LINE L1 -542 5755 5698 372 308 41 20 chr2 91287423 91287569 -161969014 + MIR SINE MIR 24 172 -90 436 178 257 0 chr2 91289434 91289535 -161967048 - FLAM_C SINE Alu -14 129 3 25 51 0 0 chr2 91290601 91290640 -161965943 + AT_rich Low_complexity Low_complexity 1 39 0 1653 199 77 35 chr2 91290896 91291378 -161965205 - MLT1D LTR MaLR -3 502 1 1067 205 46 113 chr2 91291699 91292090 -161964493 - MLT1A1 LTR MaLR 0 365 1 307 267 0 11 chr2 91292621 91292711 -161963872 + LTR67 LTR ERVL 434 522 -35 778 308 73 36 chr2 91293553 91293965 -161962618 - MLT1K LTR MaLR -9 579 153 707 258 58 26 chr2 91293973 91294163 -161962420 - MER91A DNA MER1_type 0 196 1 9508 207 40 61 chr2 91294789 91296999 -161959584 + L1MA9 LINE L1 2111 4367 -2014 334 228 33 11 chr2 91296999 91297091 -161959492 + MER2 DNA MER2_type 2 95 -250 318 194 16 0 chr2 91297091 91297153 -161959430 - MER2 DNA MER2_type 0 345 283 9508 207 40 61 chr2 91297153 91298515 -161958068 + L1MA9 LINE L1 4366 5688 -693 1709 174 42 0 chr2 91298515 91298803 -161957780 + AluJo SINE Alu 1 300 -12 9508 207 40 61 chr2 91298803 91299476 -161957107 + L1MA9 LINE L1 5688 6374 -7 1208 193 89 8 chr2 91299657 91300127 -161956456 - Charlie1b DNA MER1_type 0 523 22 1052 183 40 77 chr2 91300536 91300836 -161955747 - AluJo SINE Alu -17 295 7 1556 194 7 3 chr2 91300904 91301192 -161955391 - AluJb SINE Alu -23 289 1 24 32 0 0 chr2 91301459 91301490 -161955093 + AT_rich Low_complexity Low_complexity 1 31 0 1003 235 103 31 chr2 91302561 91302910 -161953673 - MLT1A2 LTR MaLR 0 374 1 303 279 131 44 chr2 91303211 91303440 -161953143 - MIR SINE MIR -13 249 1 247 269 158 86 chr2 91304658 91304892 -161951691 - MIR SINE MIR -11 251 1 230 285 52 44 chr2 91306673 91306808 -161949775 + MIR SINE MIR 36 173 -62 359 356 73 31 chr2 91306927 91307312 -161949271 + L2 LINE L2 1498 1898 -1416 1096 209 123 3 chr2 91307312 91307652 -161948931 - MLT1B LTR MaLR -1 389 9 283 50 50 0 chr2 91307695 91307735 -161948848 + (TTTC)n Simple_repeat Simple_repeat 1 42 0 672 163 28 17 chr2 91307735 91307913 -161948670 + CT-rich Low_complexity Low_complexity 1 180 0 298 109 0 22 chr2 91307918 91307982 -161948601 + (TTCC)n Simple_repeat Simple_repeat 1 62 0 1702 287 150 31 chr2 91308411 91308965 -161947618 + L2 LINE L2 2108 2785 -528 1755 113 17 0 chr2 91308965 91309203 -161947380 - AluSx SINE Alu -13 299 58 1702 287 150 31 chr2 91309203 91309461 -161947122 + L2 LINE L2 2785 3011 -302 7953 35 0 65 chr2 91309477 91310515 -161946068 - L1PA4 LINE L1 -8 6147 5140 2908 6 0 0 chr2 91310515 91310826 -161945757 - AluYa5 SINE Alu 0 311 1 7953 35 0 65 chr2 91310826 91310928 -161945655 - L1PA4 LINE L1 -1015 5140 5033 7537 30 0 0 chr2 91310928 91311833 -161944750 + L1P LINE L1 2266 3170 -2976 736 138 3 0 chr2 91311848 91320778 -161935805 - CER Satellite Satellite 0 8957 1 43363 51 2 3 chr2 91320785 91320799 -161935784 - L1PA3 LINE L1 0 6155 6142 5773 49 13 0 chr2 91320799 91321476 -161935107 - L1PA4 LINE L1 0 6155 5470 43363 51 2 3 chr2 91321476 91327615 -161928968 - L1PA3 LINE L1 -13 6142 4 411 103 0 0 chr2 91327615 91327673 -161928910 - CER Satellite Satellite -35 61 4 667 238 14 0 chr2 91327789 91327936 -161928647 - Ricksha DNA DNA -1897 149 1 195 42 0 0 chr2 91328804 91328828 -161927755 + (TTTTTG)n Simple_repeat Simple_repeat 3 26 0 1854 184 50 35 chr2 91328837 91329261 -161927322 - L1MB4 LINE L1 -63 6117 5688 917 257 80 0 chr2 91329266 91329503 -161927080 + 7SLRNA srpRNA srpRNA 3 258 -62 433 200 12 0 chr2 91329757 91329837 -161926746 + 7SLRNA srpRNA srpRNA 230 310 -10 972 146 24 188 chr2 91329852 91330102 -161926481 - L1MB4 LINE L1 -483 5700 5411 1589 142 58 34 chr2 91330102 91330290 -161926293 - AluSx SINE Alu -10 302 103 195 42 0 0 chr2 91330290 91330314 -161926269 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1589 142 58 34 chr2 91330314 91330420 -161926163 - AluSx SINE Alu -209 103 1 972 146 24 188 chr2 91330420 91330473 -161926110 - L1MB4 LINE L1 -772 5411 5453 378 0 0 0 chr2 91330473 91330515 -161926068 + (TG)n Simple_repeat Simple_repeat 2 43 0 972 146 24 188 chr2 91330515 91330546 -161926037 - L1MB4 LINE L1 -729 5454 5420 182 279 76 25 chr2 91330568 91330647 -161925936 + MIR SINE MIR 112 194 -68 11183 154 28 19 chr2 91330904 91330968 -161925615 - Ricksha DNA DNA -75 3171 3109 1829 144 7 0 chr2 91330968 91331253 -161925330 + AluY SINE Alu 12 298 -13 11183 154 28 19 chr2 91331253 91333153 -161923430 - Ricksha DNA DNA -137 3109 1189 1762 158 6 2 chr2 91333155 91333482 -161923101 - Ricksha DNA DNA -2745 501 95 841 129 0 72 chr2 91333483 91333593 -161922990 + FLAM_C SINE Alu 3 119 -193 2767 103 11 19 chr2 91333593 91333971 -161922612 + THE1C LTR MaLR 1 375 0 10687 126 40 5 chr2 91333971 91335497 -161921086 + THE1C-int LTR MaLR 1 1580 0 2348 122 55 17 chr2 91335497 91335858 -161920725 + THE1C LTR MaLR 1 375 0 841 129 0 72 chr2 91335858 91335884 -161920699 + FLAM_C SINE Alu 116 131 -181 556 141 0 0 chr2 91335884 91335969 -161920614 - Ricksha DNA DNA -3155 91 7 344 215 140 11 chr2 91336542 91336635 -161919948 - MER63 DNA MER1_type -104 732 2 300 290 68 68 chr2 91336684 91336952 -161919631 + L2 LINE L2 2753 3049 -264 270 284 0 0 chr2 91336952 91337019 -161919564 - MLT1E2 LTR MaLR 0 626 560 1041 178 91 38 chr2 91337021 91337285 -161919298 - MLT1D LTR MaLR -158 347 70 569 289 22 50 chr2 91337324 91337601 -161918982 + L2 LINE L2 3045 3313 0 765 224 0 0 chr2 91337814 91337939 -161918644 - FLAM_C SINE Alu -17 126 2 207 0 0 0 chr2 91339676 91339699 -161916884 + (TC)n Simple_repeat Simple_repeat 2 24 0 * 279 0 0 0 chr2 91339698 91339729 -161916854 + (TG)n Simple_repeat Simple_repeat 2 32 0 272 336 116 14 chr2 91341033 91341179 -161915404 + MARNA DNA Mariner 94 254 -332 369 301 114 23 chr2 91341193 91341369 -161915214 + MIR SINE MIR 23 214 -48 203 191 0 21 chr2 91342137 91342184 -161914399 + (TTCA)n Simple_repeat Simple_repeat 3 48 0 21 0 0 0 chr2 91343510 91343531 -161913052 + AT_rich Low_complexity Low_complexity 1 21 0 8114 26 0 0 chr2 91343544 91344747 -161911836 - L1PA3 LINE L1 -2 6153 4951 30185 24 6 0 chr2 91345118 91349380 -161907203 + L1PA3 LINE L1 1870 6155 0 25 0 0 0 chr2 91349397 91349422 -161907161 + AT_rich Low_complexity Low_complexity 1 25 0 383 324 47 33 chr2 91551560 91551773 -161704810 - MIR SINE MIR 0 262 47 529 305 150 30 chr2 91551912 91552145 -161704438 - MIR SINE MIR -1 261 1 1979 125 14 0 chr2 91552236 91552525 -161704058 + AluSx SINE Alu 12 304 -8 8341 187 23 9 chr2 91552535 91554820 -161701763 - L1M1 LINE L1 -547 7176 4859 * 16135 193 53 19 chr2 91554817 91558141 -161698442 - L1M1 LINE L1 -4117 3448 12 195 333 97 0 chr2 91558185 91558278 -161698305 + MIR SINE MIR 42 143 -65 441 331 20 20 chr2 91558389 91558540 -161698043 - MER5A DNA MER1_type -13 176 26 24 53 0 0 chr2 91558703 91558741 -161697842 + AT_rich Low_complexity Low_complexity 1 38 0 266 363 58 47 chr2 91559218 91559389 -161697194 + MIR SINE MIR 23 195 -67 2563 161 12 0 chr2 91559419 91559841 -161696742 + MSTA LTR MaLR 1 427 -1 297 219 0 0 chr2 91559849 91559922 -161696661 + GA-rich Low_complexity Low_complexity 3 75 0 460 308 46 59 chr2 91559924 91560018 -161696565 - MIR SINE MIR -10 252 158 1972 134 0 23 chr2 91560018 91560323 -161696260 - AluSx SINE Alu -14 298 1 460 308 46 59 chr2 91560323 91560465 -161696118 - MIR SINE MIR -104 158 19 832 264 35 89 chr2 91560548 91560973 -161695610 + MLT1I LTR MaLR 1 402 -7 345 312 50 50 chr2 91561682 91561903 -161694680 - L2 LINE L2 -15 3298 3078 472 258 45 102 chr2 91561959 91562203 -161694380 - L1ME1 LINE L1 -51 6115 5883 322 219 27 0 chr2 91562212 91562285 -161694298 - L1MEc LINE L1 -6293 103 29 26 50 0 0 chr2 91562423 91562463 -161694120 + AT_rich Low_complexity Low_complexity 1 40 0 21 95 0 0 chr2 91562609 91562672 -161693911 + AT_rich Low_complexity Low_complexity 1 63 0 225 154 0 0 chr2 91562731 91562770 -161693813 + (CATA)n Simple_repeat Simple_repeat 2 40 0 313 316 123 50 chr2 91562802 91563305 -161693278 - L1ME1 LINE L1 -2001 5807 5268 1604 136 29 67 chr2 91563439 91563785 -161692798 - L1MA8 LINE L1 0 6291 5959 667 297 68 28 chr2 91563998 91564247 -161692336 - MIR SINE MIR 0 262 4 254 318 120 10 chr2 91564420 91564612 -161691971 - L1ME1 LINE L1 -1446 4700 4488 1664 88 4 4 chr2 91564778 91565016 -161691567 + L1PA13 LINE L1 5922 6159 -4 3242 187 16 38 chr2 91565186 91565872 -161690711 - LTR51 LTR ERV1 0 671 1 407 304 125 0 chr2 91565926 91566166 -161690417 - L1ME3A LINE L1 -202 5968 5699 1304 283 80 25 chr2 91566290 91566737 -161689846 - L1ME3A LINE L1 -1537 4609 4188 1955 151 48 31 chr2 91566737 91567095 -161689488 + THE1B LTR MaLR 1 364 0 1304 283 80 25 chr2 91567095 91567575 -161689008 - L1ME3A LINE L1 -1958 4188 3631 2695 264 95 47 chr2 91567664 91567976 -161688607 + L1ME2 LINE L1 3523 3819 -2327 2468 71 0 0 chr2 91567976 91568287 -161688296 + AluY SINE Alu 1 311 0 2695 264 95 47 chr2 91568287 91569602 -161686981 + L1ME2 LINE L1 3819 5228 -918 1852 231 19 38 chr2 91569620 91570148 -161686435 + L1ME2 LINE L1 5493 6010 -154 25 31 0 0 chr2 91572497 91572529 -161684054 + AT_rich Low_complexity Low_complexity 1 32 0 2061 159 25 8 chr2 91572630 91572988 -161683595 - THE1B LTR MaLR 0 364 1 10026 114 19 44 chr2 91572988 91574609 -161681974 - THE1B-int LTR MaLR 0 1580 1 1998 172 25 0 chr2 91574609 91574964 -161681619 - THE1B LTR MaLR 0 364 1 4230 242 23 10 chr2 91575040 91576060 -161680523 + L1PA13 LINE L1 848 1823 -4964 5747 195 4 11 chr2 91576061 91577269 -161679314 + L1PA13 LINE L1 4751 5957 -857 1590 156 72 33 chr2 91577269 91577629 -161678954 + THE1C LTR MaLR 2 375 0 5747 195 4 11 chr2 91577629 91578477 -161678106 + L1PA13 LINE L1 5957 6809 -5 1309 91 0 0 chr2 91578701 91578877 -161677706 - AluSp SINE Alu -8 305 130 1736 204 49 0 chr2 91578963 91579311 -161677272 + MLT1A1 LTR MaLR 1 365 0 279 311 144 0 chr2 91579329 91579461 -161677122 - MIR SINE MIR -11 251 101 356 279 106 19 chr2 91579521 91579682 -161676901 + MIR SINE MIR 88 262 0 246 128 0 0 chr2 91579694 91579733 -161676850 + (A)n Simple_repeat Simple_repeat 1 39 0 615 62 0 0 chr2 91581111 91581191 -161675392 + (TA)n Simple_repeat Simple_repeat 2 81 0 1388 259 26 47 chr2 91581645 91582182 -161674401 + L1MB7 LINE L1 1123 1648 -4736 376 235 59 0 chr2 91582288 91582390 -161674193 + L1MB7 LINE L1 3764 3871 -2511 * 491 258 65 0 chr2 91582388 91582512 -161674071 - L1 LINE L1 -1929 4217 4086 1555 250 80 25 chr2 91582543 91583115 -161673468 + L1MB7 LINE L1 3883 4486 -1896 3800 191 56 20 chr2 91583175 91584169 -161672414 + L1MB7 LINE L1 5375 6401 -19 278 309 99 23 chr2 91584185 91584447 -161672136 + L1M4 LINE L1 3473 3754 -2392 201 74 0 0 chr2 91585298 91585325 -161671258 + (T)n Simple_repeat Simple_repeat 1 27 0 430 277 57 21 chr2 91585533 91585674 -161670909 + MIR SINE MIR 29 174 -88 2115 123 0 0 chr2 91586719 91587019 -161669564 - AluSx SINE Alu -12 300 1 338 318 79 0 chr2 91587503 91587629 -161668954 - MIR SINE MIR -14 248 113 289 288 34 51 chr2 91587604 91587630 -161668953 - L2 LINE L2 -210 3103 3078 * 1137 247 48 22 chr2 91587630 91587986 -161668597 + MLT1A1 LTR MaLR 1 365 0 289 288 34 51 chr2 91587986 91588077 -161668506 - L2 LINE L2 -235 3078 2988 1895 198 64 7 chr2 91588375 91588784 -161667799 + Tigger6a DNA MER2_type 15 446 -637 233 247 12 0 chr2 91588794 91588875 -161667708 + (TATATG)n Simple_repeat Simple_repeat 3 84 0 964 218 55 0 chr2 91589027 91589229 -161667354 - MER58A DNA MER1_type -1 223 11 233 277 77 92 chr2 91589368 91589563 -161667020 - HAL1b LINE L1 -824 524 333 8318 152 4 14 chr2 91589690 91591207 -161665376 - L1M1 LINE L1 -4110 3455 1954 2934 191 49 8 chr2 91591208 91591847 -161664736 + MER4D LTR ERV1 232 656 -8 216 0 0 0 chr2 91591847 91591871 -161664712 + (T)n Simple_repeat Simple_repeat 1 24 0 759 261 62 76 chr2 91592220 91592656 -161663927 - LTR16A1 LTR ERVL 0 457 28 1332 238 58 19 chr2 91592664 91593225 -161663358 - L1MDa LINE L1 -3893 2647 2212 599 223 161 5 chr2 91593229 91593422 -161663161 - L1MDa LINE L1 -4366 2174 1952 235 182 91 0 chr2 91594952 91595018 -161661565 - LTR66 LTR ERVL -171 439 368 379 268 21 134 chr2 91595080 91595274 -161661309 - MIR SINE MIR -89 173 2 193 234 0 168 chr2 91595524 91595596 -161660987 - MER5B DNA MER1_type -59 119 69 2348 37 40 10 chr2 91595596 91595892 -161660691 - AluY SINE Alu -6 305 1 193 234 0 168 chr2 91595892 91595926 -161660657 - MER5B DNA MER1_type -109 69 31 205 197 56 56 chr2 91596398 91596469 -161660114 + MIR SINE MIR 68 138 -124 590 294 14 0 chr2 91597775 91597918 -161658665 + MIR SINE MIR 53 197 -65 13817 156 17 4 chr2 91597950 91600335 -161656248 + Tigger1 DNA MER2_type 2 2417 -1 443 324 40 86 chr2 91601961 91601983 -161654600 + L2 LINE L2 2695 2716 -556 774 144 22 0 chr2 91601983 91602122 -161654461 - L1MA6 LINE L1 0 6300 6159 443 324 40 86 chr2 91602122 91602700 -161653883 + L2 LINE L2 2716 3272 0 1984 216 31 2 chr2 91603056 91603472 -161653111 + L1M1 LINE L1 1484 1911 -5654 2451 99 41 3 chr2 91603472 91603835 -161652748 + MLT2A1 LTR ERVL 1 377 -67 564 0 40 0 chr2 91603838 91603914 -161652669 + (TAGA)n Simple_repeat Simple_repeat 1 79 0 27804 98 6 6 chr2 91603914 91607929 -161648654 + HERVL-A1 LTR ERVL 1637 5654 0 3237 86 2 22 chr2 91607929 91608382 -161648201 + MLT2A1 LTR ERVL 1 444 0 8102 196 24 19 chr2 91608401 91609315 -161647268 + L1M1 LINE L1 1943 2851 -4714 243 0 0 0 chr2 91609315 91609342 -161647241 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 8102 196 24 19 chr2 91609342 91611083 -161645500 + L1M1 LINE L1 2851 4627 -2938 2343 90 3 3 chr2 91611083 91611382 -161645201 - AluSx SINE Alu -13 299 1 8102 196 24 19 chr2 91611382 91612314 -161644269 + L1M1 LINE L1 4627 5553 -2012 497 224 100 24 chr2 91612334 91612504 -161644079 - L1 LINE L1 -2864 3868 3686 1230 256 47 37 chr2 91612506 91612767 -161643816 - L1 LINE L1 -3386 3346 3076 1749 168 3 26 chr2 91612767 91613077 -161643506 - AluJb SINE Alu -9 303 1 1230 256 47 37 chr2 91613077 91613304 -161643279 - L1 LINE L1 -3656 3076 2853 351 0 0 0 chr2 91613304 91613343 -161643240 + (TG)n Simple_repeat Simple_repeat 2 40 0 5664 274 39 34 chr2 91613366 91614436 -161642147 - L1 LINE L1 -3180 3552 2489 4885 141 4 38 chr2 91614436 91615258 -161641325 + LTR25 LTR ERV1 1 794 0 5664 274 39 34 chr2 91615258 91618154 -161638429 - L1 LINE L1 -4243 2489 19 4091 131 36 82 chr2 91618155 91618977 -161637606 + LTR1 LTR ERV1 1 785 0 15238 171 40 36 chr2 91619018 91619862 -161636721 + HUERS-P2 LTR ERV1 42 881 -2207 2470 53 3 0 chr2 91619862 91620165 -161636418 + AluY SINE Alu 1 304 -7 15238 171 40 36 chr2 91620165 91621808 -161634775 + HUERS-P2 LTR ERV1 881 2547 -541 2323 90 6 10 chr2 91621808 91622119 -161634464 - AluSp SINE Alu -3 310 1 15238 171 40 36 chr2 91622119 91622664 -161633919 + HUERS-P2 LTR ERV1 2547 3088 0 3988 154 19 41 chr2 91622677 91623474 -161633109 + LTR1 LTR ERV1 7 785 0 830 294 5 5 chr2 91623478 91623696 -161632887 - L1 LINE L1 -6141 512 295 449 241 0 68 chr2 91623826 91623988 -161632595 - L1M4 LINE L1 -1149 4997 4847 29 0 0 0 chr2 91624117 91624146 -161632437 + AT_rich Low_complexity Low_complexity 1 29 0 2235 111 0 3 chr2 91624383 91624689 -161631894 - AluSp SINE Alu -7 306 2 21 36 0 0 chr2 91624808 91624836 -161631747 + AT_rich Low_complexity Low_complexity 1 28 0 423 0 0 0 chr2 91625176 91625223 -161631360 + (CA)n Simple_repeat Simple_repeat 2 48 0 219 264 92 11 chr2 91625474 91625561 -161631022 + L2 LINE L2 3220 3313 0 372 302 59 71 chr2 91627251 91627420 -161629163 + L2 LINE L2 3101 3267 -5 284 198 49 0 chr2 91627556 91627637 -161628946 - MER53 DNA DNA 0 189 105 21 57 0 0 chr2 91627741 91627776 -161628807 + AT_rich Low_complexity Low_complexity 1 35 0 17278 20 0 0 chr2 91627778 91630678 -161625905 - L1HS LINE L1 -3 6152 3253 416 139 0 0 chr2 91630679 91630751 -161625832 - MER53 DNA DNA -117 72 1 381 131 0 0 chr2 91630988 91631049 -161625534 + (A)n Simple_repeat Simple_repeat 1 61 0 2559 48 3 10 chr2 91631223 91631536 -161625047 + AluY SINE Alu 1 311 0 21 57 0 0 chr2 91632423 91632458 -161624125 + AT_rich Low_complexity Low_complexity 1 35 0 213 377 0 0 chr2 91632537 91632614 -161623969 - L2 LINE L2 -726 2588 2512 1628 197 69 42 chr2 91632614 91632740 -161623843 - MLT1C LTR MaLR 0 467 346 4717 37 14 12 chr2 91632740 91633332 -161623251 - L1PA4 LINE L1 0 6155 5563 1628 197 69 42 chr2 91633332 91633657 -161622926 - MLT1C LTR MaLR -121 346 4 997 120 0 0 chr2 91633710 91633868 -161622715 - L1P4 LINE L1 -382 5781 5624 2663 54 3 0 chr2 91633870 91634205 -161622378 - L1PA7 LINE L1 0 6154 5819 1207 165 0 84 chr2 91634208 91634457 -161622126 - AluJb SINE Alu -84 228 1 191 244 0 0 chr2 91634586 91634627 -161621956 + L2 LINE L2 3268 3308 -5 483 18 0 0 chr2 91635855 91635911 -161620672 + (CA)n Simple_repeat Simple_repeat 2 57 0 1989 112 18 0 chr2 91636430 91636706 -161619877 + AluSx SINE Alu 16 296 -16 5129 229 64 15 chr2 91636961 91637577 -161619006 - L1M4 LINE L1 -529 5655 5070 2169 101 17 3 chr2 91637577 91637874 -161618709 - AluSq SINE Alu -12 301 1 5129 229 64 15 chr2 91637874 91638067 -161618516 - L1M4 LINE L1 -1114 5070 4888 186 43 0 0 chr2 91638067 91638090 -161618493 + (TATATG)n Simple_repeat Simple_repeat 2 24 0 5129 229 64 15 chr2 91638090 91639296 -161617287 - L1M4 LINE L1 -1296 4888 3543 1506 159 8 4 chr2 91640056 91640295 -161616288 + AluSg/x SINE Alu 67 306 -4 195 179 0 0 chr2 91640756 91640795 -161615788 - MIR SINE MIR -76 186 148 3367 194 9 52 chr2 91640809 91641336 -161615247 - L1MA4 LINE L1 -1 6299 5751 345 82 0 0 chr2 91641336 91641385 -161615198 + (TA)n Simple_repeat Simple_repeat 2 50 0 3367 194 9 52 chr2 91641385 91641575 -161615008 - L1MA4 LINE L1 -549 5751 5624 2536 61 0 3 chr2 91641575 91641887 -161614696 - AluY SINE Alu 0 311 1 3367 194 9 52 chr2 91641887 91642040 -161614543 - L1MA4 LINE L1 -676 5624 5466 5791 135 35 9 chr2 91642157 91643353 -161613230 - L1MA2 LINE L1 -3 6301 5073 532 123 0 0 chr2 91643471 91643552 -161613031 - L1M1 LINE L1 -572 5732 5652 1805 295 29 28 chr2 91644090 91644830 -161611753 + L2 LINE L2 2344 3083 -230 552 88 0 10 chr2 91646539 91646800 -161609783 + AluY SINE Alu 1 311 0 2082 124 3 3 chr2 91647528 91647834 -161608749 - AluSx SINE Alu -6 306 1 4736 21 13 2 chr2 91647888 91648498 -161608085 + L1PA3 LINE L1 5585 6155 0 352 272 66 88 chr2 91648521 91648793 -161607790 + L2 LINE L2 3045 3310 -3 31 26 0 0 chr2 91649020 91649058 -161607525 + AT_rich Low_complexity Low_complexity 1 38 0 210 239 169 0 chr2 91649062 91649133 -161607450 + L2 LINE L2 3229 3311 -2 210 280 40 0 chr2 91649134 91649184 -161607399 - L2 LINE L2 -95 3177 3126 1346 284 60 21 chr2 91649915 91650451 -161606132 + L2 LINE L2 2756 3313 0 327 287 51 77 chr2 91650568 91650763 -161605820 - MIR SINE MIR -53 209 20 529 339 105 46 chr2 91650776 91651337 -161605246 - L3 LINE CR1 -258 1319 726 305 344 23 46 chr2 91651779 91651910 -161604673 + L2 LINE L2 3145 3272 0 249 228 66 42 chr2 91651986 91652151 -161604432 - L2 LINE L2 0 3272 3104 1057 191 44 117 chr2 91652365 91652732 -161603851 + MLT1C LTR MaLR 121 460 -7 470 326 47 43 chr2 91653138 91653371 -161603212 + MIR SINE MIR 29 262 0 1176 259 58 9 chr2 91654352 91654695 -161601888 + Charlie1b DNA MER1_type 6 365 -158 934 212 93 34 chr2 91654695 91654964 -161601619 - L1MD1 LINE L1 -6 6236 5952 397 224 58 45 chr2 91655062 91655218 -161601365 + Charlie1b DNA MER1_type 364 521 -2 463 223 39 0 chr2 91655234 91655337 -161601246 + MIR SINE MIR 20 126 -136 811 261 55 21 chr2 91657044 91657282 -161599301 + MIR SINE MIR 5 250 -12 236 163 0 0 chr2 91657381 91657424 -161599159 + MLT1J LTR MaLR 420 462 -49 375 355 24 24 chr2 91657435 91657604 -161598979 - MIR SINE MIR -93 169 1 403 354 88 45 chr2 91659447 91659843 -161596740 - L2 LINE L2 -4 3309 2897 2264 100 7 10 chr2 91659997 91660307 -161596276 + AluY SINE Alu 1 309 -2 800 293 104 62 chr2 91662201 91662683 -161593900 - MLT1J LTR MaLR 0 511 10 350 357 23 0 chr2 91662727 91662856 -161593727 + MIR3 SINE MIR 65 196 -12 303 315 67 56 chr2 91663035 91663213 -161593370 - L1ME3A LINE L1 -2 6168 5989 21 36 0 0 chr2 91663310 91663338 -161593245 + AT_rich Low_complexity Low_complexity 1 28 0 306 209 15 0 chr2 91663394 91663461 -161593122 - L1ME3A LINE L1 -295 5875 5808 1731 165 131 11 chr2 91663468 91663850 -161592733 - MSTA LTR MaLR 0 428 1 590 150 18 0 chr2 91663850 91663963 -161592620 - MSTA-int LTR MaLR 0 1651 1537 * 6612 152 110 8 chr2 91663952 91664766 -161591817 - MSTA-int LTR MaLR -257 1323 347 408 20 0 0 chr2 91664766 91664815 -161591768 + (TTG)n Simple_repeat Simple_repeat 2 50 0 6612 152 110 8 chr2 91664815 91665199 -161591384 - MSTA-int LTR MaLR -1233 347 3 1723 158 117 31 chr2 91665203 91665595 -161590988 - MSTA LTR MaLR -2 426 1 538 302 43 23 chr2 91665596 91665944 -161590639 - L1ME3A LINE L1 -358 5804 5450 233 204 37 19 chr2 91666109 91666163 -161590420 - L2 LINE L2 0 3313 3259 13037 180 38 36 chr2 91666283 91668842 -161587741 + L1MA2 LINE L1 16 2580 -4985 10891 186 28 44 chr2 91668862 91669692 -161586891 + L1MA2 LINE L1 3795 4636 -3087 590 180 115 16 chr2 91669692 91669814 -161586769 - AluSq/x SINE Alu -178 134 1 10891 186 28 44 chr2 91669814 91672253 -161584330 + L1MA2 LINE L1 4636 7115 -608 236 51 0 26 chr2 91672253 91672292 -161584291 + (TTTTG)n Simple_repeat Simple_repeat 1 38 0 10891 186 28 44 chr2 91672292 91672892 -161583691 + L1MA2 LINE L1 7115 7723 0 316 341 71 61 chr2 91673101 91673201 -161583382 - L2 LINE L2 -426 2888 2791 2718 29 0 6 chr2 91673201 91673514 -161583069 + AluY SINE Alu 1 311 0 316 341 71 61 chr2 91673514 91673990 -161582593 - L2 LINE L2 -523 2791 2306 * 530 311 105 5 chr2 91673982 91674201 -161582382 + MIR SINE MIR 22 262 0 194 219 109 16 chr2 91674209 91674273 -161582310 - L2 LINE L2 -985 2329 2260 610 231 28 38 chr2 91674296 91674508 -161582075 - L1MC5 LINE L1 -33 7928 7719 284 304 89 19 chr2 91674511 91674669 -161581914 - L2 LINE L2 -1068 2246 2078 2447 258 176 72 chr2 91674851 91675087 -161581496 + L2 LINE L2 1264 1474 -1840 458 36 0 0 chr2 91675087 91675143 -161581440 + MADE1 DNA Mariner 25 80 0 2447 258 176 72 chr2 91675143 91676087 -161580496 + L2 LINE L2 1474 2628 -686 351 0 0 0 chr2 91676693 91676732 -161579851 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2543 41 19 3 chr2 91676740 91677058 -161579525 - L1PA2 LINE L1 -2 6153 5831 247 336 57 25 chr2 91678087 91678209 -161578374 - MIR SINE MIR -86 176 51 276 233 55 27 chr2 91678545 91678618 -161577965 + MIR SINE MIR 47 116 -92 536 304 26 74 chr2 91680086 91680349 -161576234 - MIR SINE MIR -10 252 5 580 315 105 7 chr2 91680442 91680747 -161575836 + L2 LINE L2 87 421 -2893 360 228 87 63 chr2 91680806 91680933 -161575650 + MLT1A2 LTR MaLR 21 150 -224 690 205 13 45 chr2 91680970 91681126 -161575457 + FAM SINE Alu 22 172 -13 710 275 0 28 chr2 91681164 91681342 -161575241 + MLT1A2 LTR MaLR 186 358 -16 1354 221 19 53 chr2 91681342 91681717 -161574866 - MLT1A1 LTR MaLR 0 365 4 1773 308 137 43 chr2 91681825 91683125 -161573458 + L2 LINE L2 750 2171 -1143 335 50 89 10 chr2 91683125 91683226 -161573357 + (TA)n Simple_repeat Simple_repeat 2 110 0 317 288 62 71 chr2 91683260 91683409 -161573174 + L2 LINE L2 2187 2335 -979 1839 158 49 27 chr2 91683409 91683776 -161572807 + THE1C LTR MaLR 1 375 0 317 288 62 71 chr2 91683776 91683852 -161572731 + L2 LINE L2 2335 2410 -904 907 131 14 0 chr2 91683894 91684039 -161572544 - L1PA13 LINE L1 -19 6144 5998 490 204 0 9 chr2 91684097 91684205 -161572378 + L1P LINE L1 4651 4757 -1389 * 13496 197 32 22 chr2 91684203 91686761 -161569822 - L1PA13 LINE L1 -1509 5288 2757 2220 95 0 3 chr2 91686761 91687079 -161569504 - AluSc SINE Alu 0 317 1 13496 197 32 22 chr2 91687079 91687290 -161569293 - L1PA13 LINE L1 -4040 2757 2550 2265 71 30 10 chr2 91687290 91687585 -161568998 + AluY SINE Alu 1 301 -10 13496 197 32 22 chr2 91687585 91687977 -161568606 - L1PA13 LINE L1 -4247 2550 2092 7074 230 44 4 chr2 91687966 91689358 -161567225 - L1PA13 LINE L1 -5336 1451 5 * 1362 306 24 36 chr2 91689440 91690049 -161566534 + L2 LINE L2 2644 3309 -4 288 335 76 13 chr2 91690321 91690479 -161566104 - MIR SINE MIR -46 216 49 210 37 0 0 chr2 91690737 91690764 -161565819 + (TG)n Simple_repeat Simple_repeat 2 28 0 357 296 65 70 chr2 91691067 91691418 -161565165 - L1MC4a LINE L1 -157 5964 5616 2494 158 21 2 chr2 91691433 91691909 -161564674 - L1MA4A LINE L1 -3 7002 6518 24 0 0 0 chr2 91691909 91691933 -161564650 + AT_rich Low_complexity Low_complexity 1 24 0 5330 25 0 11 chr2 91691933 91692570 -161564013 - L1PA4 LINE L1 -3 6152 5523 2789 168 2 28 chr2 91692571 91693072 -161563511 - L1MA4A LINE L1 -484 6521 6033 1644 157 59 3 chr2 91693072 91693242 -161563341 - AluSg SINE Alu -7 303 109 402 21 0 0 chr2 91693242 91693289 -161563294 + (TTA)n Simple_repeat Simple_repeat 2 48 0 1644 157 59 3 chr2 91693289 91693405 -161563178 - AluSg SINE Alu -201 109 1 2789 168 2 28 chr2 91693405 91693433 -161563150 - L1MA4A LINE L1 -972 6033 6006 183 80 0 0 chr2 91693475 91693500 -161563083 + (CGG)n Simple_repeat Simple_repeat 1 25 0 3689 222 12 4 chr2 91693605 91694550 -161562033 - L1MA4A LINE L1 -848 6000 5057 5322 176 18 5 chr2 91694552 91695985 -161560598 + L1PA16 LINE L1 4704 6157 -9 12800 219 39 14 chr2 91695985 91699800 -161556783 - L1MA4A LINE L1 -2932 3916 3 1127 163 88 10 chr2 91700162 91700469 -161556114 - Charlie1 DNA MER1_type -17 2744 2414 4738 136 33 18 chr2 91700534 91701313 -161555270 + LTR25 LTR ERV1 4 794 0 483 295 179 13 chr2 91701385 91701619 -161554964 - LTR33 LTR ERVL -97 424 152 281 146 41 49 chr2 91702159 91702282 -161554301 + (TA)n Simple_repeat Simple_repeat 2 123 0 196 274 27 41 chr2 91703552 91703625 -161552958 - MIR SINE MIR -115 147 76 7111 246 97 10 chr2 91704668 91708404 -161548179 - L1MA2 LINE L1 -2 7721 3553 6033 194 65 18 chr2 91708441 91710723 -161545860 - L1MA2 LINE L1 -3980 3585 821 1863 155 106 23 chr2 91710782 91711163 -161545420 - LTR9 LTR ERV1 -224 420 2 4121 125 9 57 chr2 91711163 91711901 -161544682 + L1PA11 LINE L1 5470 6172 -2 538 189 0 0 chr2 91711901 91711991 -161544592 - L1P LINE L1 -1549 4597 4508 2317 173 30 26 chr2 91712102 91712598 -161543985 - L1MA10 LINE L1 -10 6324 5827 2204 154 16 0 chr2 91714366 91714735 -161541848 + THE1C LTR MaLR 1 375 0 539 305 67 18 chr2 91714938 91715161 -161541422 - MIR SINE MIR 0 262 29 717 298 70 35 chr2 91715325 91715887 -161540696 + L1MEc LINE L1 1737 2323 -4073 1990 211 18 56 chr2 91715887 91716455 -161540128 + LTR55 LTR ERV 1 546 -2 717 298 70 35 chr2 91716455 91716492 -161540091 + L1MEc LINE L1 2323 2357 -4039 337 170 9 104 chr2 91716504 91716610 -161539973 - L1MC4 LINE L1 -14 8028 7933 189 213 0 0 chr2 91716634 91716681 -161539902 + CT-rich Low_complexity Low_complexity 2 48 0 675 300 82 50 chr2 91716719 91717159 -161539424 - L1MC4 LINE L1 -124 7918 7465 2174 279 63 86 chr2 91717171 91717562 -161539021 + L1 LINE L1 4 402 -6447 2194 100 23 0 chr2 91717562 91717861 -161538722 - AluSx SINE Alu -6 306 1 2174 279 63 86 chr2 91717861 91718774 -161537809 + L1 LINE L1 402 1278 -5571 2020 175 61 22 chr2 91718801 91719212 -161537371 - MSTA LTR MaLR 0 428 2 7864 184 74 16 chr2 91719213 91719719 -161536864 - MSTA-int LTR MaLR 0 1651 1176 2100 117 0 10 chr2 91719719 91720018 -161536565 - AluSp SINE Alu -17 296 1 7864 184 74 16 chr2 91720018 91721072 -161535511 - MSTA-int LTR MaLR -475 1176 1 1916 184 57 45 chr2 91721072 91721495 -161535088 - MSTA LTR MaLR 0 428 1 1525 257 5 13 chr2 91721499 91721888 -161534695 + L1 LINE L1 1306 1691 -5158 * 1813 252 52 42 chr2 91721881 91722763 -161533820 + L1 LINE L1 1511 2413 -4436 3991 114 136 133 chr2 91722767 91724154 -161532429 + pTR5 LTR ERV1 743 2438 0 3098 175 25 16 chr2 91724192 91724319 -161532264 + L1PA16 LINE L1 5551 5675 -491 2013 138 0 0 chr2 91724319 91724617 -161531966 + AluY SINE Alu 1 298 -13 3098 175 25 16 chr2 91724617 91725100 -161531483 + L1PA16 LINE L1 5675 6166 0 21 0 0 0 chr2 91725103 91725124 -161531459 + AT_rich Low_complexity Low_complexity 1 21 0 1704 239 28 12 chr2 91725129 91726049 -161530534 + L1 LINE L1 2448 3381 -3467 * 2893 203 17 29 chr2 91726024 91726267 -161530316 + L1 LINE L1 5188 5432 -1416 287 49 24 0 chr2 91726267 91726308 -161530275 + (TA)n Simple_repeat Simple_repeat 2 43 0 2893 203 17 29 chr2 91726308 91726760 -161529823 + L1 LINE L1 5432 5875 -973 2076 114 0 0 chr2 91726873 91727153 -161529430 - AluSg SINE Alu -30 280 1 433 306 82 68 chr2 91727204 91727557 -161529026 - L2 LINE L2 -574 2740 2383 283 281 168 21 chr2 91727570 91727808 -161528775 + L1M2 LINE L1 4640 4912 -1936 317 316 52 11 chr2 91727957 91728305 -161528278 + L1M2 LINE L1 4990 5351 -1497 912 283 104 37 chr2 91728356 91729367 -161527216 + L1ME LINE L1 4494 5585 -577 1442 55 0 0 chr2 91729369 91729551 -161527032 + L1PA5 LINE L1 5971 6152 -2 582 86 0 0 chr2 91729891 91729972 -161526611 + (TG)n Simple_repeat Simple_repeat 2 82 0 367 78 31 0 chr2 91730429 91730493 -161526090 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 1832 167 33 17 chr2 91731978 91732337 -161524246 + MLT1A1 LTR MaLR 1 365 0 4604 196 66 14 chr2 91734003 91734961 -161521622 + L1M3f LINE L1 16 1023 -4305 2692 189 209 14 chr2 91734955 91735610 -161520973 + L1M1 LINE L1 9 791 -6774 * 214 274 55 0 chr2 91736970 91737043 -161519540 - MIR SINE MIR -22 240 164 729 258 89 127 chr2 91737051 91737486 -161519097 - MLT1E LTR MaLR -7 586 200 2612 276 31 21 chr2 91737547 91738575 -161518008 + L1P LINE L1 2236 3273 -2873 265 133 22 0 chr2 91738589 91738634 -161517949 + MLT2A1 LTR ERVL 333 378 -66 331 200 59 6 chr2 91738638 91738808 -161517775 + (TA)n Simple_repeat Simple_repeat 2 180 0 342 114 0 69 chr2 91738808 91738939 -161517644 + (TATAA)n Simple_repeat Simple_repeat 3 124 0 211 96 0 58 chr2 91738939 91738991 -161517592 + (TTAA)n Simple_repeat Simple_repeat 1 49 0 * 285 196 60 0 chr2 91738958 91739091 -161517492 + (TA)n Simple_repeat Simple_repeat 2 142 0 183 47 23 47 chr2 91739095 91739138 -161517445 + (TTATA)n Simple_repeat Simple_repeat 3 44 0 2179 82 80 17 chr2 91739138 91739490 -161517093 - MLT2A1 LTR ERVL -70 374 1 762 236 59 15 chr2 91739490 91739898 -161516685 - L1M4c LINE L1 -3797 2418 2023 1790 224 22 29 chr2 91739928 91740375 -161516208 + MLT1C LTR MaLR 4 447 -20 1441 217 35 131 chr2 91740394 91740774 -161515809 - MLT2B1 LTR ERVL -78 442 118 1481 159 45 19 chr2 91740774 91741088 -161515495 - L1MA7 LINE L1 0 6291 5970 1441 217 35 131 chr2 91741088 91741196 -161515387 - MLT2B1 LTR ERVL -402 118 1 1553 193 6 19 chr2 91741199 91741521 -161515062 + MLT1C-int LTR MaLR 157 474 -897 731 283 53 62 chr2 91741535 91741857 -161514726 - HAL1 LINE L1 -2171 336 18 273 356 106 16 chr2 91742047 91742235 -161514348 - MIR SINE MIR -44 218 14 31 26 0 0 chr2 91742288 91742326 -161514257 + AT_rich Low_complexity Low_complexity 1 38 0 965 284 73 18 chr2 91743045 91743386 -161513197 + L3 LINE CR1 1197 1556 -21 234 170 0 21 chr2 91743407 91743454 -161513129 + CT-rich Low_complexity Low_complexity 2 47 0 617 293 45 25 chr2 91743694 91743936 -161512647 + MIR SINE MIR 10 256 -6 284 325 33 69 chr2 91745420 91745725 -161510858 - L1ME LINE L1 -282 5839 5546 2058 166 3 27 chr2 91745796 91746169 -161510414 - THE1B LTR MaLR 0 364 1 2796 131 16 11 chr2 91746169 91746618 -161509965 - THE1B-int LTR MaLR 0 1580 1130 523 118 0 0 chr2 91746624 91746700 -161509883 - THE1B-int LTR MaLR -646 934 859 * 1753 101 0 0 chr2 91746694 91746942 -161509641 - THE1B-int LTR MaLR -1332 248 1 2191 150 14 0 chr2 91746942 91747301 -161509282 - THE1B LTR MaLR 0 364 1 723 275 74 77 chr2 91747348 91748280 -161508303 + L1ME LINE L1 1194 2143 -4578 22 35 0 0 chr2 91748328 91748357 -161508226 + AT_rich Low_complexity Low_complexity 1 29 0 469 273 70 47 chr2 91748576 91748877 -161507706 + L1ME LINE L1 2457 2699 -3841 1402 240 44 51 chr2 91748906 91749030 -161507553 + L1ME LINE L1 5598 5721 -835 1356 205 60 11 chr2 91749030 91749321 -161507262 + AluJo SINE Alu 1 304 0 1402 240 44 51 chr2 91749321 91749714 -161506869 + L1ME LINE L1 5721 6124 -432 1144 210 18 4 chr2 91749740 91750016 -161506567 + L1MA7 LINE L1 6003 6282 -9 180 111 0 0 chr2 91750091 91750118 -161506465 + (TAA)n Simple_repeat Simple_repeat 2 28 0 22 35 0 0 chr2 91750218 91750247 -161506336 + AT_rich Low_complexity Low_complexity 1 29 0 2120 269 128 10 chr2 91750253 91751557 -161505026 + L1ME LINE L1 3985 5493 -1047 7382 233 24 81 chr2 91751578 91751815 -161504768 + L1PA15 LINE L1 1604 1853 -4608 1534 151 188 105 chr2 91751815 91752358 -161504225 - LTR4 LTR ERV1 0 588 1 7382 233 24 81 chr2 91752358 91755103 -161501480 + L1PA15 LINE L1 1853 4442 -2019 2750 164 11 2 chr2 91755141 91756314 -161500269 + L1PA15 LINE L1 5169 6480 0 1241 279 20 15 chr2 91756476 91756877 -161499706 + MLT1C LTR MaLR 65 467 0 564 278 77 8 chr2 91756881 91757244 -161499339 + L1ME1 LINE L1 5794 6182 -2 2088 179 56 17 chr2 91757439 91757848 -161498735 + MSTB LTR MaLR 1 425 -1 739 43 0 0 chr2 91757898 91757992 -161498591 - L1PA3 LINE L1 -2638 3508 3415 15853 25 0 0 chr2 91757992 91760625 -161495958 + L1PA3 LINE L1 3519 6152 -3 24 0 0 0 chr2 91760625 91760649 -161495934 + AT_rich Low_complexity Low_complexity 1 24 0 28 0 0 0 chr2 91760751 91760779 -161495804 + AT_rich Low_complexity Low_complexity 1 28 0 189 0 0 0 chr2 91761036 91761057 -161495526 + (TA)n Simple_repeat Simple_repeat 1 21 0 332 312 58 69 chr2 91761147 91761493 -161495090 - L1M4 LINE L1 -1734 4412 4071 576 256 77 6 chr2 91761562 91761730 -161494853 + MIR SINE MIR 66 245 -17 662 234 0 6 chr2 91762580 91762738 -161493845 - L1MB8 LINE L1 -5 6173 6017 759 135 8 0 chr2 91762835 91762961 -161493622 + L1MA4A LINE L1 6156 6282 -21 329 294 145 60 chr2 91763451 91763866 -161492717 - L1M4 LINE L1 -2171 3975 3526 2369 89 0 7 chr2 91763905 91764209 -161492374 - AluSc SINE Alu -5 304 3 648 165 266 6 chr2 91764242 91764400 -161492183 - L1PA16 LINE L1 -5 6161 5963 25 0 0 0 chr2 91764671 91764696 -161491887 + AT_rich Low_complexity Low_complexity 1 25 0 248 0 31 0 chr2 91765269 91765301 -161491282 + (TG)n Simple_repeat Simple_repeat 1 33 0 189 178 0 0 chr2 91766606 91766651 -161489932 + (TGAA)n Simple_repeat Simple_repeat 1 45 0 2398 208 39 20 chr2 91766951 91767513 -161489070 + L1MB5 LINE L1 5602 6174 0 2108 113 3 0 chr2 91767520 91767813 -161488770 + AluSg SINE Alu 1 294 -16 2094 110 10 0 chr2 91767815 91768137 -161488446 + AluSx SINE Alu 1 312 0 23 0 0 0 chr2 91768542 91768565 -161488018 + AT_rich Low_complexity Low_complexity 1 23 0 1306 299 85 27 chr2 91768827 91769463 -161487120 + L2 LINE L2 2639 3311 -2 1525 200 3 19 chr2 91769619 91769934 -161486649 - AluJo SINE Alu -2 310 1 361 304 19 48 chr2 91769934 91770133 -161486450 - HAL1 LINE L1 -1352 1155 961 2131 96 0 4 chr2 91770509 91770815 -161485768 - AluSg SINE Alu 0 307 3 2312 142 17 39 chr2 91771044 91771259 -161485324 - L1MC2 LINE L1 -441 5903 5700 1406 155 45 26 chr2 91771259 91771405 -161485178 - L1MA9 LINE L1 -1 6311 6169 249 33 0 0 chr2 91771405 91771435 -161485148 + (TG)n Simple_repeat Simple_repeat 2 31 0 1406 155 45 26 chr2 91771435 91771597 -161484986 - L1MA9 LINE L1 -143 6169 5997 2312 142 17 39 chr2 91771597 91771791 -161484792 - L1MC2 LINE L1 -644 5700 5503 1742 153 7 4 chr2 91772046 91772327 -161484256 - AluSx SINE Alu -30 282 1 487 291 87 15 chr2 91772627 91772833 -161483750 - MIR SINE MIR -25 237 17 22 80 0 0 chr2 91773700 91773750 -161482833 + AT_rich Low_complexity Low_complexity 1 50 0 2053 59 73 0 chr2 91773756 91774028 -161482555 - AluY SINE Alu -19 292 1 240 125 25 0 chr2 91774060 91774100 -161482483 + Alu SINE Alu 1 41 -261 684 107 49 16 chr2 91774236 91774358 -161482225 + AluY SINE Alu 7 132 -179 21 0 0 0 chr2 91774358 91774379 -161482204 + AT_rich Low_complexity Low_complexity 1 21 0 262 279 8 33 chr2 91774382 91774504 -161482079 + L1ME3A LINE L1 6044 6162 -8 261 301 0 0 chr2 91774603 91774676 -161481907 + (CATATA)n Simple_repeat Simple_repeat 4 76 0 1256 102 0 0 chr2 91774701 91774867 -161481716 + AluSc SINE Alu 134 299 -10 523 175 0 19 chr2 91774998 91775101 -161481482 - FRAM SINE Alu -8 168 68 331 320 40 45 chr2 91775204 91775426 -161481157 - L1M4 LINE L1 -3061 3085 2865 200 301 73 59 chr2 91775564 91775700 -161480883 - L2 LINE L2 -8 3305 3168 196 391 40 7 chr2 91776162 91776313 -161480270 + L2 LINE L2 1797 1952 -1362 314 312 65 65 chr2 91776370 91776524 -161480059 + L2 LINE L2 3110 3263 -9 1621 228 11 8 chr2 91776701 91777065 -161479518 - MLT1A1 LTR MaLR 0 365 1 250 296 0 0 chr2 91778400 91778471 -161478112 + (TATATG)n Simple_repeat Simple_repeat 6 76 0 395 306 17 23 chr2 91778570 91778743 -161477840 - L1ME3A LINE L1 -8 6162 5991 1242 203 46 63 chr2 91778770 91778889 -161477694 + MLT1A1 LTR MaLR 4 124 -241 1256 208 25 113 chr2 91778889 91779289 -161477294 + MLT1A1 LTR MaLR 1 365 0 1242 203 46 63 chr2 91779289 91779519 -161477064 + MLT1A1 LTR MaLR 124 347 -18 5111 181 16 45 chr2 91779563 91780618 -161475965 + ERVL-B3 LTR ERVL 4728 5752 -12 2027 268 13 25 chr2 91780623 91781141 -161475442 + MLT2B3 LTR ERVL 1 513 -41 372 48 48 0 chr2 91781141 91781204 -161475379 + (TAGA)n Simple_repeat Simple_repeat 4 69 0 2027 268 13 25 chr2 91781204 91781238 -161475345 + MLT2B3 LTR ERVL 513 546 -8 931 220 72 12 chr2 91781246 91781496 -161475087 - L1M4 LINE L1 -747 5399 5135 978 274 0 5 chr2 91783010 91783233 -161473350 + HUERS-P2 LTR ERV1 289 510 -2578 2067 212 52 56 chr2 91783336 91783873 -161472710 + HUERS-P2 LTR ERV1 562 1096 -1992 1037 95 14 0 chr2 91783921 91784069 -161472514 + L1MA2 LINE L1 6155 6304 0 193 73 24 24 chr2 91784300 91784341 -161472242 + (TATAA)n Simple_repeat Simple_repeat 5 45 0 1016 87 0 0 chr2 91784358 91784485 -161472098 - AluSq/x SINE Alu -185 127 1 293 368 29 37 chr2 91784509 91784645 -161471938 - L2 LINE L2 -11 3261 3127 228 302 0 0 chr2 91784691 91784744 -161471839 + L2 LINE L2 3246 3298 -15 1170 305 74 27 chr2 91784846 91785579 -161471004 + L2 LINE L2 2536 3309 -4 181 260 50 80 chr2 91785912 91785983 -161470600 - L3 LINE CR1 -499 1078 1011 655 260 153 7 chr2 91785983 91786264 -161470319 - MER5C DNA MER1_type -2 322 1 315 361 65 19 chr2 91786370 91786586 -161469997 + L2 LINE L2 1954 2179 -1135 1310 268 24 58 chr2 91786669 91787170 -161469413 + MER74B LTR ERVL 56 539 -83 531 361 63 40 chr2 91787258 91787657 -161468926 + L2 LINE L2 2316 2723 -591 858 350 73 36 chr2 91787878 91788121 -161468462 + L1MEc LINE L1 142 375 -6021 2409 71 3 0 chr2 91788121 91788417 -161468166 + AluSp SINE Alu 3 299 -14 858 350 73 36 chr2 91788417 91789000 -161467583 + L1MEc LINE L1 375 998 -5398 20072 168 28 20 chr2 91789049 91789308 -161467275 - L1PA11 LINE L1 -3 6171 5916 2070 128 0 0 chr2 91789308 91789596 -161466987 - AluSg SINE Alu -22 288 1 20072 168 28 20 chr2 91789596 91790110 -161466473 - L1PA11 LINE L1 -258 5916 5408 2220 147 5 16 chr2 91790110 91790478 -161466105 - THE1B LTR MaLR 0 364 1 20072 168 28 20 chr2 91790478 91792203 -161464380 - L1PA11 LINE L1 -766 5408 3698 183 42 0 0 chr2 91792203 91792227 -161464356 + (TTG)n Simple_repeat Simple_repeat 2 25 0 20072 168 28 20 chr2 91792227 91792665 -161463918 - L1PA11 LINE L1 -2476 3698 3265 180 0 0 0 chr2 91792665 91792685 -161463898 + (TTTTA)n Simple_repeat Simple_repeat 3 22 0 20072 168 28 20 chr2 91792685 91794056 -161462527 - L1PA11 LINE L1 -2909 3265 1828 2363 91 0 7 chr2 91794056 91794364 -161462219 + AluY SINE Alu 1 306 -5 20072 168 28 20 chr2 91794364 91794987 -161461596 - L1PA11 LINE L1 -4346 1828 1211 2846 198 45 24 chr2 91794993 91795666 -161460917 - L1MA6 LINE L1 -21 6279 5593 5454 173 16 20 chr2 91795679 91796919 -161459664 - L1MA2 LINE L1 -1 6303 5069 1352 214 33 39 chr2 91796919 91797262 -161459321 - MSTB LTR MaLR 0 426 53 3751 209 17 40 chr2 91797262 91798077 -161458506 - MSTB-int LTR MaLR -29 1622 827 1289 161 5 0 chr2 91798072 91798289 -161458294 - MSTB-int LTR MaLR -1433 218 1 * 1692 192 106 28 chr2 91798289 91798684 -161457899 - MSTB LTR MaLR 0 426 1 3422 224 23 2 chr2 91798684 91799515 -161457068 - L1MA2 LINE L1 -1073 5073 4226 * 8006 225 31 38 chr2 91799512 91801554 -161455029 + L1M1 LINE L1 3069 5158 -2407 257 254 0 0 chr2 91801554 91801609 -161454974 + Tigger5 DNA MER2_type 1 55 -2268 8006 225 31 38 chr2 91801609 91802077 -161454506 + L1M1 LINE L1 5158 5628 -1937 24 0 0 0 chr2 91802230 91802254 -161454329 + AT_rich Low_complexity Low_complexity 1 24 0 772 326 85 28 chr2 91802319 91803032 -161453551 + L2 LINE L2 2562 3313 0 334 220 66 11 chr2 91803144 91803235 -161453348 + MER63 DNA MER1_type 8 729 -107 576 313 31 0 chr2 91803309 91803501 -161453082 - MIR SINE MIR -62 200 3 33 25 0 0 chr2 91803597 91803637 -161452946 + AT_rich Low_complexity Low_complexity 1 40 0 602 326 99 12 chr2 91805863 91806105 -161450478 - MLT1J LTR MaLR -69 442 180 2284 134 261 13 chr2 91807129 91807651 -161448932 + MER4-int LTR ERV1 36 686 -5912 281 26 26 0 chr2 91807731 91807769 -161448814 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 885 173 69 15 chr2 91807823 91808025 -161448558 + MER4-int LTR ERV1 1275 1487 -5111 446 184 19 68 chr2 91808026 91808129 -161448454 + MER4A LTR ERV1 1 98 -566 1568 144 3 82 chr2 91808129 91808479 -161448104 + MER4A LTR ERV1 261 641 -23 1426 147 5 0 chr2 91808479 91808703 -161447880 + MER41C LTR ERV1 330 554 0 832 282 107 7 chr2 91809318 91809765 -161446818 - HAL1 LINE L1 0 2507 2016 1707 212 72 76 chr2 91810114 91810736 -161445847 + MLT1E3 LTR MaLR 1 620 -4 1879 128 10 3 chr2 91813979 91814284 -161442299 - L1PA10 LINE L1 -3 6165 5859 21 0 0 0 chr2 91814916 91814937 -161441646 + AT_rich Low_complexity Low_complexity 1 21 0 1852 132 63 30 chr2 91815031 91815394 -161441189 + THE1C LTR MaLR 1 375 0 5987 104 308 47 chr2 91815394 91816647 -161439936 + THE1C-int LTR MaLR 1 1580 0 1986 125 49 33 chr2 91816647 91817014 -161439569 + THE1C LTR MaLR 1 373 -2 298 274 29 29 chr2 91817066 91817168 -161439415 + L2 LINE L2 2240 2341 -973 440 339 117 55 chr2 91817171 91817820 -161438763 + L2 LINE L2 2579 3272 0 311 316 38 44 chr2 91820063 91820221 -161436362 - MER117 DNA MER1_type -35 162 6 415 242 0 0 chr2 91822017 91822112 -161434471 - L1MB7 LINE L1 -19 6165 6071 237 268 14 0 chr2 91822198 91822269 -161434314 + (TA)n Simple_repeat Simple_repeat 1 72 0 26 82 0 0 chr2 91822293 91822354 -161434229 + AT_rich Low_complexity Low_complexity 1 61 0 198 255 20 61 chr2 91822501 91822599 -161433984 - MIR SINE MIR -70 192 99 361 294 112 6 chr2 91823003 91823173 -161433410 + MIR SINE MIR 53 240 -22 808 163 0 7 chr2 91823309 91823444 -161433139 + AluJb SINE Alu 161 294 -18 22 0 0 0 chr2 91825696 91825718 -161430865 + AT_rich Low_complexity Low_complexity 1 22 0 1222 222 89 22 chr2 91826645 91826960 -161429623 - MER2 DNA MER2_type -9 336 1 230 200 22 0 chr2 91828735 91828780 -161427803 + MER69 DNA AcHobo 2480 2525 -1 182 290 145 0 chr2 91828784 91828846 -161427737 - MIR SINE MIR -112 150 80 23 33 0 0 chr2 91829044 91829074 -161427509 + AT_rich Low_complexity Low_complexity 1 30 0 25 0 0 0 chr2 91829119 91829144 -161427439 + AT_rich Low_complexity Low_complexity 1 25 0 1987 55 0 4 chr2 91829305 91829559 -161427024 + L1PA4 LINE L1 5903 6155 0 37 0 0 0 chr2 91829940 91829977 -161426606 + AT_rich Low_complexity Low_complexity 1 37 0 192 346 75 19 chr2 91830105 91830212 -161426371 + MIR SINE MIR 32 144 -64 279 303 0 0 chr2 91830434 91830500 -161426083 - L2 LINE L2 -1 3312 3247 1866 110 4 0 chr2 91830913 91831177 -161425406 + AluSp SINE Alu 47 311 -2 330 182 0 0 chr2 91831255 91831321 -161425262 + (TA)n Simple_repeat Simple_repeat 2 67 0 226 119 0 0 chr2 91831328 91831370 -161425213 - LTR66 LTR ERVL -171 439 398 292 135 0 0 chr2 91831370 91831422 -161425161 + L1MC4 LINE L1 6652 6703 -1339 232 247 0 72 chr2 91831394 91831491 -161425092 - L1MC4 LINE L1 -1339 6703 6614 * 266 161 54 0 chr2 91831497 91831553 -161425030 + LTR66 LTR ERVL 394 452 -158 254 273 30 0 chr2 91831772 91831838 -161424745 + GA-rich Low_complexity Low_complexity 3 70 0 1054 312 57 26 chr2 91832203 91832329 -161424254 - L2 LINE L2 -1 3312 3191 2369 128 78 2 chr2 91832329 91832727 -161423856 + MSTA LTR MaLR 1 428 0 1054 312 57 26 chr2 91832727 91833187 -161423396 - L2 LINE L2 -122 3191 2711 792 236 0 0 chr2 91833197 91833354 -161423229 - FRAM SINE Alu -19 157 1 594 316 167 32 chr2 91833359 91833701 -161422882 - L2 LINE L2 -603 2711 2324 317 293 0 0 chr2 91834134 91834216 -161422367 - MIR SINE MIR -13 249 168 336 310 70 70 chr2 91834217 91834501 -161422082 - LTR67 LTR ERVL -2 555 272 531 225 19 92 chr2 91835047 91835223 -161421360 + MIR SINE MIR 42 203 -59 220 337 0 59 chr2 91835600 91835701 -161420882 - MIR SINE MIR 0 262 168 248 356 59 22 chr2 91836305 91836440 -161420143 + MIR3 SINE MIR 42 181 -27 345 333 97 11 chr2 91836650 91836836 -161419747 + MIR SINE MIR 5 206 -56 201 374 43 25 chr2 91837138 91837301 -161419282 + MER5A DNA MER1_type 24 189 0 180 295 186 45 chr2 91837301 91837417 -161419166 - MIR3 SINE MIR -51 157 20 2349 87 0 3 chr2 91837990 91838299 -161418284 + AluSg SINE Alu 1 308 -2 276 293 127 25 chr2 91838611 91838768 -161417815 + MIR3 SINE MIR 20 192 -16 185 234 149 0 chr2 91839819 91839866 -161416717 + L2 LINE L2 3243 3296 -17 24 0 0 0 chr2 91840843 91840867 -161415716 + AT_rich Low_complexity Low_complexity 1 24 0 358 294 196 0 chr2 91841070 91841233 -161415350 - MIR SINE MIR -35 227 33 3367 83 14 0 chr2 91841435 91842186 -161414397 - L1PA8A LINE L1 -427 5704 4947 3153 90 5 2 chr2 91842186 91842606 -161413977 + L1PA8A LINE L1 5697 6129 -2 24 96 0 0 chr2 91842693 91842766 -161413817 + AT_rich Low_complexity Low_complexity 1 73 0 278 218 0 0 chr2 91843230 91843285 -161413298 - L2 LINE L2 -17 3296 3242 23 68 0 0 chr2 91843869 91843913 -161412670 + AT_rich Low_complexity Low_complexity 1 44 0 18834 184 15 12 chr2 91844023 91845452 -161411131 - L1PA13 LINE L1 -3 6811 5388 348 24 0 0 chr2 91845452 91845493 -161411090 + (TG)n Simple_repeat Simple_repeat 2 42 0 18834 184 15 12 chr2 91845493 91847527 -161409056 - L1PA13 LINE L1 -1426 5388 3323 2637 94 11 11 chr2 91847527 91847900 -161408683 + THE1C LTR MaLR 1 373 -2 18834 184 15 12 chr2 91847900 91849314 -161407269 - L1PA13 LINE L1 -3491 3323 1915 473 233 31 63 chr2 91849342 91849501 -161407082 - L2 LINE L2 -1 3312 3159 1599 151 0 17 chr2 91849635 91849926 -161406657 - L1PA13 LINE L1 -4734 2053 1768 219 366 83 59 chr2 91851464 91851718 -161404865 - L2 LINE L2 -461 2853 2594 1446 324 50 0 chr2 91851810 91852289 -161404294 - L2 LINE L2 -2151 1163 661 203 147 0 0 chr2 91852753 91852787 -161403796 + (CA)n Simple_repeat Simple_repeat 1 34 0 255 308 60 49 chr2 91852956 91853141 -161403442 - L2 LINE L2 0 3313 3127 264 293 67 0 chr2 91903970 91904045 -161352538 - L2 LINE L2 0 3313 3234 1725 122 12 0 chr2 91904059 91904304 -161352279 - AluSx SINE Alu -29 283 36 24 32 0 0 chr2 91904697 91904728 -161351855 + AT_rich Low_complexity Low_complexity 1 31 0 813 178 7 0 chr2 91904844 91904979 -161351604 + AluJo SINE Alu 1 136 -176 2190 117 0 3 chr2 91905146 91905445 -161351138 + AluSx SINE Alu 1 298 -14 525 186 77 70 chr2 91905446 91905602 -161350981 + L1ME LINE L1 5667 5823 -341 828 195 106 31 chr2 91906158 91906384 -161350199 + MIR SINE MIR 20 262 0 564 299 198 22 chr2 91907179 91907850 -161348733 + L2 LINE L2 2462 3265 -48 233 363 112 19 chr2 91908156 91908415 -161348168 + L2 LINE L2 2985 3267 -5 210 300 44 11 chr2 91908747 91908837 -161347746 - MIR3 SINE MIR -25 183 91 928 160 13 0 chr2 91909551 91909701 -161346882 + AluJb SINE Alu 147 298 -14 642 294 82 25 chr2 91909852 91910206 -161346377 + L1M4 LINE L1 4477 4850 -1296 377 227 0 0 chr2 91910227 91910302 -161346281 + U13 snRNA snRNA 1 75 -29 198 0 0 0 chr2 91910335 91910357 -161346226 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 5167 140 25 25 chr2 91910419 91911263 -161345320 + MER21B LTR ERV1 1 844 -19 2022 148 0 10 chr2 91911390 91911687 -161344896 - AluSx SINE Alu -18 294 1 2233 114 3 10 chr2 91911697 91912005 -161344578 - AluSx SINE Alu -6 306 1 1264 113 5 16 chr2 91912074 91912260 -161344323 + MER20 DNA MER1_type 36 219 0 709 89 0 0 chr2 91912314 91912415 -161344168 + AluSg/x SINE Alu 205 305 -7 313 273 182 26 chr2 91912568 91912799 -161343784 + L1M2 LINE L1 5293 5559 -753 2419 84 0 10 chr2 91912809 91913118 -161343465 + AluSg SINE Alu 5 310 0 1246 88 6 0 chr2 91913120 91913279 -161343304 + AluSq SINE Alu 136 295 -18 372 276 39 120 chr2 91913279 91913711 -161342872 + L1ME3A LINE L1 5554 5950 -220 21 0 0 0 chr2 91914077 91914098 -161342485 + AT_rich Low_complexity Low_complexity 1 21 0 200 269 32 43 chr2 91914279 91914372 -161342211 + MIR SINE MIR 63 154 -108 275 118 53 0 chr2 91914390 91914466 -161342117 + (TA)n Simple_repeat Simple_repeat 1 80 0 987 199 9 40 chr2 91916340 91916566 -161340017 + AluJo SINE Alu 86 304 -8 2092 141 3 0 chr2 91916578 91916875 -161339708 + AluSx SINE Alu 1 298 -14 1687 209 54 54 chr2 91916876 91917226 -161339357 + L1ME2 LINE L1 5667 6019 -145 2140 106 32 0 chr2 91917226 91917509 -161339074 + AluSg SINE Alu 1 292 -18 1687 209 54 54 chr2 91917509 91917656 -161338927 + L1ME2 LINE L1 6018 6164 0 2358 98 0 3 chr2 91917689 91917994 -161338589 + AluSq SINE Alu 1 304 -9 229 177 16 97 chr2 91918575 91918637 -161337946 + MIR SINE MIR 170 226 -36 641 223 123 55 chr2 91918844 91919136 -161337447 + MLT1J1 LTR MaLR 1 312 -134 233 305 102 8 chr2 91919971 91920089 -161336494 - MIR SINE MIR -3 259 131 227 77 0 26 chr2 91920191 91920230 -161336353 + (CCCCCA)n Simple_repeat Simple_repeat 5 42 0 2300 80 7 0 chr2 91920694 91921010 -161335573 - AluSx SINE Alu 0 318 1 545 238 142 29 chr2 91922513 91922797 -161333786 - L1M1 LINE L1 -359 5803 5541 242 202 394 0 chr2 91923410 91923514 -161333069 - L1ME4a LINE L1 -11 6110 5966 245 167 30 64 chr2 91923619 91923707 -161332876 - L1P4 LINE L1 -369 5796 5707 23 92 0 0 chr2 91924195 91924260 -161332323 + AT_rich Low_complexity Low_complexity 1 65 0 2268 124 3 0 chr2 91924404 91924710 -161331873 + AluSx SINE Alu 1 307 -5 660 135 0 103 chr2 91925104 91925230 -161331353 + AluJb SINE Alu 174 286 -26 261 247 146 51 chr2 91925271 91925626 -161330957 - L2 LINE L2 -171 3142 2750 1843 73 0 0 chr2 91925677 91925896 -161330687 - AluSq SINE Alu -94 219 1 282 239 74 117 chr2 91925964 91926132 -161330451 - L2 LINE L2 -611 2703 2546 2591 64 3 0 chr2 91926132 91926444 -161330139 - AluSp SINE Alu 0 313 1 282 239 74 117 chr2 91926444 91926505 -161330078 - L2 LINE L2 -768 2546 2484 591 122 102 0 chr2 91926521 91926619 -161329964 + FRAM SINE Alu 69 176 0 189 264 143 33 chr2 91926751 91926842 -161329741 - MIR SINE MIR -51 211 111 395 242 25 33 chr2 91926849 91926969 -161329614 + MIR SINE MIR 22 140 -122 22 0 0 0 chr2 91927352 91927374 -161329209 + AT_rich Low_complexity Low_complexity 1 22 0 342 298 27 31 chr2 91928446 91928671 -161327912 + L1M4 LINE L1 4917 5140 -1006 2270 108 0 13 chr2 91928871 91929185 -161327398 - AluSg SINE Alu 0 310 1 416 196 119 40 chr2 91929255 91929412 -161327171 + LTR41 LTR ERVL 1 179 -616 1156 164 70 12 chr2 91929707 91929951 -161326632 + MER58 DNA MER1_type 2163 2420 0 2153 113 0 7 chr2 91930012 91930312 -161326271 + AluSx SINE Alu 1 298 -14 2283 117 0 0 chr2 91930321 91930621 -161325962 + AluSx SINE Alu 1 300 -12 323 115 0 0 chr2 91930621 91930673 -161325910 - Alu SINE Alu -3 299 248 403 107 27 0 chr2 91930773 91930848 -161325735 + GA-rich Low_complexity Low_complexity 2 78 0 195 42 0 0 chr2 91930854 91930878 -161325705 + (GGAGA)n Simple_repeat Simple_repeat 5 28 0 2225 86 0 4 chr2 91930898 91931176 -161325407 + AluSc SINE Alu 22 298 -11 2530 161 53 41 chr2 91931461 91931951 -161324632 + MLT1D LTR MaLR 2 497 -8 1647 252 70 50 chr2 91931980 91932599 -161323984 - MER20B DNA MER1_type -37 746 116 445 252 27 0 chr2 91932787 91932898 -161323685 - MER20B DNA MER1_type -669 114 1 1508 209 61 106 chr2 91932948 91932975 -161323608 + LTR9 LTR ERV1 1 28 -584 2431 101 0 0 chr2 91932975 91933281 -161323302 + AluSx SINE Alu 1 306 -6 1508 209 61 106 chr2 91933281 91933894 -161322689 + LTR9 LTR ERV1 28 612 0 2064 116 3 23 chr2 91933945 91934248 -161322335 + AluSq SINE Alu 1 297 -16 1508 190 0 11 chr2 91935459 91935523 -161321060 + MER58B DNA MER1_type 61 124 -2296 1704 189 3 3 chr2 91935523 91935824 -161320759 + AluJb SINE Alu 1 301 -11 1508 190 0 11 chr2 91935824 91936043 -161320540 + MER58B DNA MER1_type 124 341 0 1895 152 10 3 chr2 91936474 91936770 -161319813 + AluJo SINE Alu 1 298 -14 2203 100 0 0 chr2 91936772 91937074 -161319509 + AluSc SINE Alu 6 307 0 285 269 67 49 chr2 91937623 91937849 -161318734 + L1ME LINE L1 5635 5864 -300 1963 163 7 0 chr2 91938061 91938367 -161318216 + AluSq SINE Alu 1 308 -5 265 314 93 17 chr2 91938594 91938712 -161317871 - L1ME LINE L1 -462 5708 5582 514 265 15 7 chr2 91938944 91939080 -161317503 - MER117 DNA MER1_type -57 140 4 2231 113 0 0 chr2 91939554 91939847 -161316736 - AluSx SINE Alu -18 294 2 471 187 101 22 chr2 91939971 91940110 -161316473 + MER104 DNA Tc2 1 150 -30 526 296 101 25 chr2 91940166 91940306 -161316277 - L1ME4a LINE L1 -224 5897 5769 3645 160 7 2 chr2 91940306 91940912 -161315671 - L1PA16 LINE L1 -7 6159 5551 526 296 101 25 chr2 91940912 91941258 -161315325 - L1ME4a LINE L1 -352 5769 5374 231 236 153 0 chr2 91941336 91941408 -161315175 + L2 LINE L2 3186 3268 -4 183 205 0 0 chr2 91941409 91941448 -161315135 + GA-rich Low_complexity Low_complexity 2 40 0 721 147 0 17 chr2 91941448 91941564 -161315019 - AluSq/x SINE Alu -198 115 2 1393 181 89 6 chr2 91941566 91941977 -161314606 - MLT1D LTR MaLR -4 501 1 1905 155 3 16 chr2 91942929 91943239 -161313344 - AluJb SINE Alu -6 306 1 206 348 94 36 chr2 91943547 91943607 -161312976 + L2 LINE L2 3122 3177 -95 2368 70 0 29 chr2 91943607 91943920 -161312663 - AluY SINE Alu -7 304 1 206 348 94 36 chr2 91943920 91943997 -161312586 + L2 LINE L2 3177 3267 -5 252 246 18 0 chr2 91943999 91944056 -161312527 + GA-rich Low_complexity Low_complexity 3 60 0 1957 156 0 19 chr2 91944121 91944428 -161312155 + AluJo SINE Alu 1 301 -11 2441 82 0 3 chr2 91945118 91945424 -161311159 - AluSx SINE Alu -7 305 1 214 313 38 0 chr2 91945608 91945688 -161310895 - MIR SINE MIR -17 245 163 431 274 9 0 chr2 91945803 91945909 -161310674 - MIR SINE MIR -108 154 48 232 212 61 15 chr2 91946039 91946105 -161310478 - MER5A DNA MER1_type -8 181 113 * 419 194 218 8 chr2 91946050 91946174 -161310409 + MER5A DNA MER1_type 34 183 -6 219 304 43 0 chr2 91946609 91946678 -161309905 + L3 LINE CR1 613 684 -893 2204 217 117 35 chr2 91946877 91946963 -161309620 + MER97c DNA MER1_type? 13 91 -999 2187 89 0 3 chr2 91946963 91947245 -161309338 + AluSg SINE Alu 26 306 -4 2204 217 117 35 chr2 91947245 91947781 -161308802 + MER97c DNA MER1_type? 91 686 -404 301 288 129 0 chr2 91948105 91948268 -161308315 + L3 LINE CR1 676 859 -718 2372 95 0 0 chr2 91948305 91948601 -161307982 - AluSx SINE Alu -16 296 1 548 203 62 8 chr2 91948601 91948729 -161307854 + L1MA10 LINE L1 6199 6333 -1 2241 116 3 0 chr2 91948833 91949135 -161307448 - AluSx SINE Alu -9 303 1 581 303 57 30 chr2 91950075 91950339 -161306244 + L3 LINE CR1 1143 1413 -164 4312 141 42 72 chr2 91950455 91950565 -161306018 - MER21B LTR ERV1 -58 805 693 2589 52 0 3 chr2 91950565 91950874 -161305709 - AluY SINE Alu -3 308 1 2303 102 0 0 chr2 91950877 91951172 -161305411 - AluSx SINE Alu -17 295 1 4312 141 42 72 chr2 91951172 91951571 -161305012 - MER21B LTR ERV1 -172 691 282 207 0 0 0 chr2 91951571 91951594 -161304989 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 2004 118 0 0 chr2 91951594 91951866 -161304717 - AluSg SINE Alu -35 275 4 4312 141 42 72 chr2 91951866 91952180 -161304403 - MER21B LTR ERV1 -579 284 1 3020 174 51 82 chr2 91952718 91952938 -161303645 + MER72 LTR ERV1 1 226 -496 1536 159 7 83 chr2 91952938 91953089 -161303494 + AluJb SINE Alu 1 119 -193 2254 107 3 0 chr2 91953089 91953380 -161303203 + AluSp SINE Alu 1 292 -21 1536 159 7 83 chr2 91953380 91953530 -161303053 + AluJb SINE Alu 119 279 -33 3020 174 51 82 chr2 91953530 91953769 -161302814 + MER72 LTR ERV1 226 471 -251 2145 206 31 74 chr2 91953769 91954348 -161302235 + MLT2B3 LTR ERVL 1 554 0 3020 174 51 82 chr2 91954348 91954632 -161301951 + MER72 LTR ERV1 471 722 0 326 274 24 0 chr2 91954672 91954756 -161301827 - LTR24B LTR ERV1 -9 567 482 * 1388 85 0 163 chr2 91954749 91955032 -161301551 + Tigger1 DNA MER2_type 1595 1831 -587 622 239 94 13 chr2 91955032 91955266 -161301317 + L1MEc LINE L1 2179 2406 -3809 860 201 6 12 chr2 91955407 91955576 -161301007 - AluJb SINE Alu -8 304 137 815 255 57 0 chr2 91955578 91955770 -161300813 - MER58C DNA MER1_type -8 207 5 427 222 19 0 chr2 91955774 91955882 -161300701 + L1MEc LINE L1 3967 4076 -2139 924 284 26 46 chr2 91955892 91956307 -161300276 - L1MDa LINE L1 -6103 437 31 2124 97 3 27 chr2 91956596 91956894 -161299689 - AluY SINE Alu -20 291 1 1635 170 4 4 chr2 91957054 91957319 -161299264 + AluJb SINE Alu 40 304 -8 477 257 169 6 chr2 91958277 91958460 -161298123 - MIR SINE MIR 0 262 50 2181 118 0 10 chr2 91959613 91959910 -161296673 - AluSx SINE Alu -18 294 1 865 200 71 13 chr2 91960247 91960402 -161296181 - FAM SINE Alu -21 164 1 2107 142 0 0 chr2 91961533 91961829 -161294754 + AluSx SINE Alu 2 297 -15 468 35 0 0 chr2 91961829 91961887 -161294696 + (TA)n Simple_repeat Simple_repeat 2 59 0 22 0 0 0 chr2 91961989 91962011 -161294572 + AT_rich Low_complexity Low_complexity 1 22 0 21 89 0 0 chr2 91962456 91962512 -161294071 + AT_rich Low_complexity Low_complexity 1 56 0 1479 180 18 21 chr2 91962943 91963226 -161293357 + AluJo SINE Alu 1 282 -30 2233 112 7 0 chr2 91963504 91963799 -161292784 - AluSq SINE Alu -16 297 1 455 282 48 0 chr2 91963803 91963927 -161292656 + MER94 DNA DNA 5 134 0 2092 128 3 0 chr2 91963964 91964262 -161292321 + AluSg SINE Alu 1 299 -11 2519 76 0 0 chr2 91965444 91965745 -161290838 - AluY SINE Alu -10 301 1 1008 278 97 34 chr2 91966314 91966934 -161289649 + L2 LINE L2 2650 3310 -3 1866 163 0 0 chr2 91967048 91967354 -161289229 - AluSx SINE Alu 0 308 3 210 306 174 25 chr2 91967930 91968051 -161288532 - L2 LINE L2 -609 2705 2567 243 310 97 21 chr2 91968126 91968271 -161288312 + L1ME3A LINE L1 5792 5947 -223 1835 118 7 56 chr2 91968748 91969053 -161287530 + AluJb SINE Alu 1 290 -22 195 100 0 0 chr2 91969764 91969794 -161286789 + (CGG)n Simple_repeat Simple_repeat 1 30 0 27 0 0 0 chr2 91969906 91969933 -161286650 + GC_rich Low_complexity Low_complexity 1 27 0 22 35 0 0 chr2 91969971 91970000 -161286583 + GC_rich Low_complexity Low_complexity 1 29 0 1013 103 19 6 chr2 91970554 91970710 -161285873 - FRAM SINE Alu -26 150 1 3156 175 69 11 chr2 91970726 91971350 -161285233 - MER67B LTR ERV1 0 661 2 368 286 82 34 chr2 91972225 91972372 -161284211 + MIR3 SINE MIR 5 158 -50 321 308 22 11 chr2 91972374 91972465 -161284118 + MER20 DNA MER1_type 1 92 -127 3770 136 83 100 chr2 91972476 91973409 -161283174 - Ricksha DNA DNA -13 3233 2350 272 103 0 0 chr2 91973432 91973471 -161283112 - Ricksha DNA DNA -1101 80 42 555 222 7 52 chr2 91973507 91973642 -161282941 + MER20 DNA MER1_type 91 219 0 1837 157 7 14 chr2 91974309 91974596 -161281987 + AluJo SINE Alu 11 295 -17 1991 150 13 7 chr2 91974875 91975182 -161281401 - AluSx SINE Alu -3 309 1 327 310 100 0 chr2 91975372 91975472 -161281111 - L2 LINE L2 -5 3267 3158 1625 158 4 15 chr2 91975845 91976118 -161280465 - AluJb SINE Alu -4 308 39 1135 233 63 67 chr2 91976752 91977144 -161279439 + L1M4 LINE L1 4064 4455 -1691 2105 106 20 3 chr2 91977144 91977436 -161279147 + AluSq SINE Alu 1 297 -16 1135 233 63 67 chr2 91977436 91977503 -161279080 + L1M4 LINE L1 4455 4521 -1625 2006 118 11 3 chr2 91977694 91977981 -161278602 + AluJb SINE Alu 1 289 -23 853 89 9 0 chr2 91978141 91978253 -161278330 + FLAM_C SINE Alu 1 113 -30 207 0 0 0 chr2 91978257 91978280 -161278303 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 1652 185 0 10 chr2 91978549 91978841 -161277742 + AluJb SINE Alu 1 289 -23 708 242 84 5 chr2 91979102 91979292 -161277291 - MIR SINE MIR -12 250 46 2664 224 48 65 chr2 91979486 91979543 -161277040 - L1ME1 LINE L1 -5 6161 6105 2199 110 14 0 chr2 91979543 91979833 -161276750 + AluSx SINE Alu 1 294 -18 2664 224 48 65 chr2 91979833 91980367 -161276216 - L1ME1 LINE L1 -61 6105 5643 1607 165 38 24 chr2 91980367 91980658 -161275925 + AluJo SINE Alu 10 304 -8 2664 224 48 65 chr2 91980658 91981107 -161275476 - L1ME1 LINE L1 -523 5643 5188 787 194 0 8 chr2 91981108 91981242 -161275341 - FLAM_C SINE Alu 0 133 1 785 201 98 44 chr2 91981384 91981539 -161275044 + MIR SINE MIR 26 196 -66 2110 108 0 17 chr2 91981539 91981836 -161274747 + AluSp SINE Alu 1 292 -21 785 201 98 44 chr2 91981836 91981884 -161274699 + MIR SINE MIR 196 240 -22 219 294 129 24 chr2 91981962 91982047 -161274536 + L3 LINE CR1 327 420 -1157 295 326 72 33 chr2 91982578 91982759 -161273824 + L3 LINE CR1 543 730 -847 1436 167 12 16 chr2 91982802 91983059 -161273524 + AluJo SINE Alu 9 264 -48 2306 97 0 0 chr2 91983154 91983454 -161273129 + AluY SINE Alu 1 300 -11 240 360 124 13 chr2 91984189 91984414 -161272169 + L2 LINE L2 2383 2632 -682 782 167 0 8 chr2 91985505 91985625 -161270958 - FLAM_C SINE Alu -19 124 6 26 74 0 0 chr2 91985767 91985821 -161270762 + AT_rich Low_complexity Low_complexity 1 54 0 2035 129 7 3 chr2 91985821 91986108 -161270475 - AluSx SINE Alu -24 288 1 2319 134 32 24 chr2 91986569 91986941 -161269642 + THE1C LTR MaLR 1 375 0 1435 132 0 9 chr2 91987804 91988016 -161268567 + AluJb SINE Alu 1 210 -102 22 35 0 0 chr2 91988247 91988276 -161268307 + AT_rich Low_complexity Low_complexity 1 29 0 321 324 123 29 chr2 91988993 91989163 -161267420 - MIR3 SINE MIR -4 204 19 265 295 129 20 chr2 91989493 91989605 -161266978 + MIR SINE MIR 31 143 -65 1000 269 171 23 chr2 91989907 91990305 -161266278 - MLT1J LTR MaLR -54 457 1 2062 162 23 65 chr2 91990592 91991024 -161265559 + L1MA6 LINE L1 5887 6300 0 23 78 0 0 chr2 91991025 91991076 -161265507 + AT_rich Low_complexity Low_complexity 1 51 0 2213 171 79 14 chr2 91991420 91991865 -161264718 - L1MB7 LINE L1 -277 5907 5434 * 2743 91 33 42 chr2 91991859 91991977 -161264606 - L1ME1 LINE L1 -6 6160 6042 2424 65 0 7 chr2 91991977 91992271 -161264312 - AluSx SINE Alu -20 292 1 2743 91 33 42 chr2 91992271 91992564 -161264019 - L1ME1 LINE L1 -124 6042 5748 824 195 0 0 chr2 91992564 91992692 -161263891 - FLAM_C SINE Alu -3 130 3 2743 91 33 42 chr2 91992692 91992930 -161263653 - L1ME1 LINE L1 -418 5748 5509 6921 113 94 22 chr2 91992930 91993345 -161263238 - Tigger3b DNA MER2_type -1797 1231 847 216 0 0 0 chr2 91993345 91993369 -161263214 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 2085 113 3 0 chr2 91993369 91993652 -161262931 - AluSx SINE Alu -28 284 1 6921 113 94 22 chr2 91993652 91993861 -161262722 - Tigger3b DNA MER2_type -2181 847 655 2362 103 3 0 chr2 91993861 91994172 -161262411 - AluSx SINE Alu 0 312 1 6921 113 94 22 chr2 91994172 91994693 -161261890 - Tigger3b DNA MER2_type -2373 655 1 2743 91 33 42 chr2 91994693 91994935 -161261648 - L1ME1 LINE L1 -657 5509 5414 2266 101 0 0 chr2 91995042 91995330 -161261253 + AluSx SINE Alu 5 292 -20 45 0 0 0 chr2 91995330 91995375 -161261208 + AT_rich Low_complexity Low_complexity 1 45 0 2254 120 0 3 chr2 91996235 91996543 -161260040 + AluSx SINE Alu 1 307 -5 350 117 325 0 chr2 91998194 91998271 -161258312 - MER41A-int LTR ERV1 -5844 102 1 4012 96 47 4 chr2 91998271 91998802 -161257781 - MER41A LTR ERV1 0 554 1 346 280 14 43 chr2 91998957 91999072 -161257511 + MIR SINE MIR 17 141 -93 2343 171 33 37 chr2 91999425 91999881 -161256702 + MLT2B2 LTR ERVL 1 454 -61 2207 83 52 0 chr2 91999891 92000181 -161256402 + AluSq SINE Alu 1 305 -8 188 350 119 37 chr2 92000197 92000239 -161256344 + L3 LINE CR1 293 330 -1247 3889 109 91 8 chr2 92000239 92000834 -161255749 + LTR9B LTR ERV1 1 644 0 188 350 119 37 chr2 92000834 92001034 -161255549 + L3 LINE CR1 330 555 -1022 614 85 8 137 chr2 92001347 92001440 -161255143 + Tigger2a DNA MER2_type 3 78 -2640 2387 69 17 0 chr2 92001440 92001730 -161254853 + AluSp SINE Alu 1 295 -18 614 85 8 137 chr2 92001730 92001764 -161254819 + Tigger2a DNA MER2_type 78 115 -329 2084 148 120 3 chr2 92001968 92002325 -161254258 - MER57A LTR ERV1 0 403 5 1586 183 22 0 chr2 92002330 92002598 -161253985 + AluJo SINE Alu 22 295 -17 2370 97 7 0 chr2 92002752 92003062 -161253521 + AluSx SINE Alu 1 312 0 23 54 0 0 chr2 92003102 92003139 -161253444 + AT_rich Low_complexity Low_complexity 1 37 0 21 57 0 0 chr2 92003167 92003202 -161253381 + AT_rich Low_complexity Low_complexity 1 35 0 2133 242 125 3 chr2 92003470 92004045 -161252538 - L1MC4 LINE L1 -140 7902 7258 463 294 123 0 chr2 92004683 92004853 -161251730 + MIR SINE MIR 72 262 0 24 0 0 0 chr2 92004876 92004900 -161251683 + AT_rich Low_complexity Low_complexity 1 24 0 2740 210 120 81 chr2 92004931 92005928 -161250655 + LTR28 LTR ERV1 1 988 -32 369 165 117 39 chr2 92005930 92006033 -161250550 + LTR27 LTR ERV1 525 635 -1 4230 124 39 2 chr2 92006139 92006751 -161249832 + MER41B LTR ERV1 1 635 0 265 304 0 0 chr2 92006995 92007064 -161249519 - MIR SINE MIR -111 151 83 665 226 0 19 chr2 92008190 92008345 -161248238 + U2 snRNA snRNA 1 152 -36 456 226 88 10 chr2 92008490 92008592 -161247991 + AluJ SINE Alu 8 117 -195 621 152 76 199 chr2 92008597 92008873 -161247710 - AluJo SINE Alu -69 243 2 992 165 48 37 chr2 92008874 92009062 -161247521 + AluJ SINE Alu 114 303 -9 2103 104 56 0 chr2 92009065 92009352 -161247231 + AluSx SINE Alu 1 303 -9 1713 95 9 0 chr2 92009353 92009574 -161247009 + AluSg/x SINE Alu 82 304 -6 1893 119 3 72 chr2 92009574 92009909 -161246674 + AluSx SINE Alu 1 312 0 452 206 10 0 chr2 92010001 92010098 -161246485 - U2 snRNA snRNA -77 111 14 1978 152 0 10 chr2 92010412 92010722 -161245861 + AluJb SINE Alu 1 307 -5 2402 106 0 0 chr2 92011099 92011411 -161245172 + AluSx SINE Alu 1 312 0 365 284 93 43 chr2 92011553 92011743 -161244840 + MIR SINE MIR 3 199 -63 2276 81 10 52 chr2 92012655 92012963 -161243620 + AluSq SINE Alu 1 295 -18 225 252 252 35 chr2 92012976 92013119 -161243464 - MIR3 SINE MIR -19 189 16 1892 144 7 3 chr2 92013604 92013888 -161242695 - AluJb SINE Alu -25 287 3 416 220 87 20 chr2 92013897 92014047 -161242536 + Charlie8 DNA MER1_type 77 236 -2181 678 111 0 19 chr2 92014701 92014809 -161241774 + L1MB3 LINE L1 6039 6144 -39 1287 191 78 0 chr2 92014832 92015125 -161241458 + L1MD2 LINE L1 6044 6359 0 1612 17 0 0 chr2 92015674 92015855 -161240728 - L1PA2 LINE L1 0 6155 5975 21 0 0 0 chr2 92015879 92015900 -161240683 + AT_rich Low_complexity Low_complexity 1 21 0 186 43 0 0 chr2 92015920 92015943 -161240640 + (A)n Simple_repeat Simple_repeat 1 23 0 378 287 29 44 chr2 92015969 92016105 -161240478 - MIR SINE MIR -59 203 70 1056 290 97 15 chr2 92016193 92016665 -161239918 + L2 LINE L2 2800 3313 0 1797 167 31 17 chr2 92017877 92018237 -161238346 - MLT2D LTR ERVL -49 365 1 406 327 56 12 chr2 92018237 92018399 -161238184 - MIR SINE MIR -54 208 40 1984 153 19 19 chr2 92018427 92018734 -161237849 - AluJb SINE Alu -5 307 1 530 324 7 0 chr2 92018836 92018972 -161237611 - MIR3 SINE MIR -3 205 69 1275 228 52 98 chr2 92020291 92020415 -161236168 - LTR33 LTR ERVL -4 517 389 1621 157 45 18 chr2 92020415 92020525 -161236058 + AluJo SINE Alu 11 116 -196 197 33 33 0 chr2 92020525 92020555 -161236028 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 1621 157 45 18 chr2 92020555 92020708 -161235875 + AluJo SINE Alu 116 285 -27 219 36 0 0 chr2 92020708 92020736 -161235847 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 1621 157 45 18 chr2 92020736 92020757 -161235826 + AluJo SINE Alu 285 304 -8 1275 228 52 98 chr2 92020757 92021172 -161235411 - LTR33 LTR ERVL -132 389 3 351 250 158 8 chr2 92022078 92022198 -161234385 - MIR SINE MIR -124 138 1 22 0 0 0 chr2 92022824 92022846 -161233737 + AT_rich Low_complexity Low_complexity 1 22 0 258 299 62 10 chr2 92023080 92023177 -161233406 + MIR3 SINE MIR 86 187 -21 273 281 52 21 chr2 92023288 92023384 -161233199 - MIR SINE MIR -78 130 32 221 221 208 0 chr2 92023915 92023992 -161232591 + MIR SINE MIR 53 145 -63 419 279 158 46 chr2 92025757 92025972 -161230611 + MIR SINE MIR 20 256 -6 995 205 35 13 chr2 92026203 92026432 -161230151 - MER76 LTR ERV -1 687 454 1110 119 11 23 chr2 92026443 92026619 -161229964 - MLT1C LTR MaLR -293 174 1 201 74 0 0 chr2 92026652 92026679 -161229904 + (CA)n Simple_repeat Simple_repeat 1 27 0 22 0 0 0 chr2 92027053 92027075 -161229508 + AT_rich Low_complexity Low_complexity 1 22 0 560 243 69 12 chr2 92027483 92027656 -161228927 + MIR3 SINE MIR 16 198 -10 2013 147 3 13 chr2 92027919 92028232 -161228351 - AluJb SINE Alu 0 312 3 205 205 0 0 chr2 92028420 92028459 -161228124 + A-rich Low_complexity Low_complexity 1 39 0 371 261 17 53 chr2 92028500 92028771 -161227812 + CT-rich Low_complexity Low_complexity 1 261 0 252 268 173 0 chr2 92029991 92030170 -161226413 + L1ME4a LINE L1 5724 5933 -188 248 28 56 0 chr2 92030277 92030313 -161226270 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 2032 143 0 0 chr2 92030315 92030601 -161225982 - AluSx SINE Alu -26 286 1 333 304 148 7 chr2 92030688 92030823 -161225760 + HAL1b LINE L1 1189 1342 -6 1049 333 128 27 chr2 92031040 92031671 -161224912 + L3 LINE CR1 353 1047 -530 717 229 72 0 chr2 92032272 92032438 -161224145 + MER5B DNA MER1_type 1 178 0 231 298 21 92 chr2 92032464 92032605 -161223978 + MER5B DNA MER1_type 25 155 -23 2516 90 0 0 chr2 92032651 92032962 -161223621 - AluY SINE Alu 0 311 1 467 325 31 6 chr2 92033842 92034005 -161222578 - MER5B DNA MER1_type -9 169 3 589 272 12 17 chr2 92034021 92034194 -161222389 + MIR SINE MIR 33 204 -58 189 0 0 0 chr2 92034213 92034234 -161222349 + (CA)n Simple_repeat Simple_repeat 2 22 0 1025 211 86 61 chr2 92034236 92034488 -161222095 + MER2 DNA MER2_type 11 274 -71 1971 138 0 10 chr2 92034488 92034777 -161221806 + AluSx SINE Alu 1 286 -26 1025 211 86 61 chr2 92034777 92034851 -161221732 + MER2 DNA MER2_type 274 345 0 189 74 0 0 chr2 92034859 92034886 -161221697 + (TG)n Simple_repeat Simple_repeat 2 28 0 631 273 145 0 chr2 92035375 92035547 -161221036 - MER117 DNA MER1_type 0 197 1 207 0 0 0 chr2 92035688 92035711 -161220872 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2394 65 7 3 chr2 92035755 92036047 -161220536 + AluY SINE Alu 1 293 -18 3866 100 0 0 chr2 92036378 92036920 -161219663 - L1P LINE L1 -5596 550 9 216 307 26 26 chr2 92036975 92037068 -161219515 + MIR SINE MIR 38 131 -77 1813 169 40 6 chr2 92037526 92037876 -161218707 - MSTB LTR MaLR 0 426 65 426 89 0 0 chr2 92037976 92038032 -161218551 - MSTB LTR MaLR -370 56 1 485 297 0 9 chr2 92038032 92038143 -161218440 - MIR SINE MIR -62 146 37 216 97 0 0 chr2 92038184 92038215 -161218368 + (TG)n Simple_repeat Simple_repeat 1 31 0 548 238 133 33 chr2 92038249 92038459 -161218124 + MIR SINE MIR 4 234 -28 269 324 93 39 chr2 92038522 92038704 -161217879 + MIR SINE MIR 1 192 -70 317 238 179 0 chr2 92038755 92038839 -161217744 + L2 LINE L2 3210 3308 -5 299 281 22 11 chr2 92038917 92039006 -161217577 - MIR SINE MIR -126 136 47 306 0 0 0 chr2 92039141 92039175 -161217408 + (TG)n Simple_repeat Simple_repeat 2 35 0 206 241 0 19 chr2 92039611 92039665 -161216918 + (CAACT)n Simple_repeat Simple_repeat 4 56 0 574 324 162 24 chr2 92041355 92042033 -161214550 + L2 LINE L2 1554 2388 -926 548 248 8 0 chr2 92042072 92042189 -161214394 + L2 LINE L2 3142 3259 -13 270 81 0 0 chr2 92042189 92042226 -161214357 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 1001 173 55 25 chr2 92042363 92042565 -161214018 + MER3 DNA MER1_type 1 208 -1 381 274 177 42 chr2 92042594 92042809 -161213774 + MIR SINE MIR 19 262 0 658 246 0 0 chr2 92042890 92043024 -161213559 - MER63A DNA MER1_type 0 210 77 218 280 263 8 chr2 92043112 92043230 -161213353 - L3 LINE CR1 -186 1391 1244 1847 172 7 3 chr2 92043376 92043678 -161212905 - AluJb SINE Alu -9 303 1 2376 158 96 19 chr2 92044028 92044497 -161212086 - MLT1D LTR MaLR 0 505 1 433 200 105 0 chr2 92045036 92045141 -161211442 + MER63 DNA MER1_type 1 742 -320 534 250 82 11 chr2 92045687 92045871 -161210712 + LTR33 LTR ERVL 261 457 -64 * 3944 136 66 6 chr2 92045867 92046538 -161210045 - MER50 LTR ERV1 -23 711 1 456 371 96 25 chr2 92046596 92046949 -161209634 + L2 LINE L2 2474 2851 -463 183 176 59 0 chr2 92047135 92047169 -161209414 + L2 LINE L2 3196 3231 -41 274 310 35 35 chr2 92048032 92048145 -161208438 - MIR SINE MIR -52 210 98 305 348 138 21 chr2 92048435 92048771 -161207812 - L1MC4a LINE L1 -1894 5914 5619 207 0 0 0 chr2 92048771 92048794 -161207789 + (TA)n Simple_repeat Simple_repeat 2 24 0 2131 120 0 52 chr2 92048794 92049119 -161207464 - AluSx SINE Alu -4 308 1 305 348 138 21 chr2 92049119 92049362 -161207221 - L1MC4a LINE L1 -2188 5620 5266 2357 112 0 3 chr2 92049574 92049887 -161206696 - AluSx SINE Alu 0 312 1 1381 226 69 3 chr2 92050332 92050651 -161205932 + MER58B DNA MER1_type 2 341 0 1802 193 158 7 chr2 92050969 92051373 -161205210 - MLT1C LTR MaLR -2 465 1 232 286 26 39 chr2 92052358 92052435 -161204148 - L2 LINE L2 -15 3298 3223 232 253 133 0 chr2 92052646 92052721 -161203862 + MIR SINE MIR 49 133 -129 904 134 8 22 chr2 92053918 92054052 -161202531 - FLAM_C SINE Alu -1 132 1 180 176 29 0 chr2 92054566 92054600 -161201983 - MIR SINE MIR -63 145 111 401 270 9 0 chr2 92055653 92055764 -161200819 + MER94 DNA DNA 4 115 -19 754 250 43 17 chr2 92056228 92056460 -161200123 + MIR SINE MIR 9 246 -16 224 281 0 101 chr2 92056530 92056619 -161199964 + L2 LINE L2 3193 3272 0 302 280 43 43 chr2 92057272 92057365 -161199218 + L1MC4 LINE L1 6617 6709 -1333 255 310 30 10 chr2 92057372 92057472 -161199111 + (TATG)n Simple_repeat Simple_repeat 2 103 0 188 169 31 77 chr2 92057738 92057803 -161198780 + L3b LINE CR1 1277 1338 -245 214 348 105 6 chr2 92058031 92058212 -161198371 + L2 LINE L2 2599 2797 -517 244 250 40 26 chr2 92058487 92058563 -161198020 - L3 LINE CR1 -27 1550 1474 342 0 0 0 chr2 92059064 92059102 -161197481 + (TG)n Simple_repeat Simple_repeat 2 39 0 4989 113 10 1 chr2 92061118 92061847 -161194736 + L1PA15 LINE L1 5422 6156 -9 22 0 0 0 chr2 92061876 92061898 -161194685 + AT_rich Low_complexity Low_complexity 1 22 0 460 240 78 68 chr2 92062108 92062300 -161194283 - L1MEd LINE L1 -5816 303 110 267 214 36 36 chr2 92113769 92113853 -161142730 + LTR33A LTR ERVL 440 523 0 21 57 0 0 chr2 92113899 92113934 -161142649 + AT_rich Low_complexity Low_complexity 1 35 0 253 232 0 36 chr2 92114774 92114830 -161141753 - MIR SINE MIR -89 173 120 252 157 60 0 chr2 92116090 92116147 -161140436 + MIR SINE MIR 115 175 -87 210 188 0 42 chr2 92117478 92117526 -161139057 + C-rich Low_complexity Low_complexity 1 46 0 2097 123 0 3 chr2 92118566 92118867 -161137716 - AluSc SINE Alu -9 300 1 294 75 25 0 chr2 92118943 92118983 -161137600 + MER53 DNA DNA 1 41 -148 744 238 98 10 chr2 92119003 92119196 -161137387 + MIR SINE MIR 45 254 -8 357 317 21 42 chr2 92120366 92120508 -161136075 - MIR SINE MIR -118 144 6 2173 104 0 9 chr2 92120750 92121066 -161135517 + AluSq SINE Alu 1 313 0 2604 209 48 17 chr2 92121233 92121835 -161134748 - L1MD2 LINE L1 -21 6338 5713 296 307 247 16 chr2 92121850 92122101 -161134482 - L2 LINE L2 0 3313 3005 240 35 0 0 chr2 92122199 92122219 -161134364 + (CA)n Simple_repeat Simple_repeat 1 49 0 240 35 0 0 chr2 92122219 92122248 -161134335 + (CA)n Simple_repeat Simple_repeat 2 30 0 731 136 0 0 chr2 92122264 92122374 -161134209 - FLAM_A SINE Alu -13 129 20 475 261 151 33 chr2 92122389 92122661 -161133922 - L2 LINE L2 -339 2975 2672 186 250 0 0 chr2 92122843 92122899 -161133684 + C-rich Low_complexity Low_complexity 2 57 0 830 119 11 38 chr2 92122899 92123084 -161133499 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 399 302 0 9 chr2 92123247 92123363 -161133220 - MIR SINE MIR -134 128 14 369 271 173 0 chr2 92123786 92123919 -161132664 + MIR SINE MIR 81 236 -26 1839 163 70 61 chr2 92123951 92124410 -161132173 + MLT1C LTR MaLR 2 464 -3 195 304 0 0 chr2 92124458 92124504 -161132079 + MIR SINE MIR 57 102 -160 * 219 216 307 23 chr2 92124499 92124587 -161131996 - MIR3 SINE MIR -1 207 95 190 213 19 0 chr2 92124583 92124643 -161131940 + MIR SINE MIR 101 140 -68 * 382 333 0 8 chr2 92124943 92125063 -161131520 + MIR3 SINE MIR 37 155 -53 217 294 29 15 chr2 92125050 92125118 -161131465 - MIR SINE MIR -192 70 2 * 22 70 0 0 chr2 92125354 92125397 -161131186 + AT_rich Low_complexity Low_complexity 1 43 0 381 295 6 6 chr2 92125692 92125858 -161130725 + (CAT)n Simple_repeat Simple_repeat 3 168 0 1257 116 5 74 chr2 92125888 92126103 -161130480 - MLT2A1 LTR ERVL 0 444 245 698 249 19 94 chr2 92126236 92126545 -161130038 + L2 LINE L2 3028 3313 0 1498 219 77 14 chr2 92126813 92127252 -161129331 - MLT1C LTR MaLR 0 467 1 201 241 19 111 chr2 92127304 92127412 -161129171 - L2 LINE L2 -667 2647 2550 * 278 260 67 10 chr2 92127404 92127508 -161129075 - MIR SINE MIR -96 166 57 216 297 17 59 chr2 92127535 92127653 -161128930 - MIR SINE MIR -140 122 10 284 306 62 35 chr2 92128066 92128210 -161128373 + MIR SINE MIR 107 254 -8 301 287 56 37 chr2 92128260 92128368 -161128215 + MIR3 SINE MIR 45 154 -54 1093 257 16 16 chr2 92128373 92128622 -161127961 + MIR SINE MIR 14 262 0 230 226 65 65 chr2 92128625 92128718 -161127865 + MIR SINE MIR 134 226 -36 4596 201 61 22 chr2 92129202 92130065 -161126518 + L1MDa LINE L1 1504 2449 -4091 680 108 0 0 chr2 92130065 92130158 -161126425 + HY4 scRNA scRNA 1 93 0 4596 201 61 22 chr2 92130158 92130794 -161125789 + L1MDa LINE L1 2449 3059 -3481 183 200 0 0 chr2 92130989 92131019 -161125564 + L2 LINE L2 3248 3277 -36 * 207 140 140 20 chr2 92130993 92131043 -161125540 + MIR SINE MIR 207 262 0 185 234 13 91 chr2 92131040 92131117 -161125466 - MIR SINE MIR -73 189 119 * 707 72 78 0 chr2 92131850 92132017 -161124566 + CT-rich Low_complexity Low_complexity 1 180 0 306 73 0 0 chr2 92132034 92132075 -161124508 + (TC)n Simple_repeat Simple_repeat 1 41 0 3399 132 30 12 chr2 92133582 92134142 -161122441 - L1MB3 LINE L1 -2 6181 5612 289 359 35 5 chr2 92134189 92134387 -161122196 + L2 LINE L2 2764 2967 -347 1866 177 105 21 chr2 92134449 92134878 -161121705 - MLT1C LTR MaLR -2 465 1 228 316 51 8 chr2 92135037 92135154 -161121429 - MIR SINE MIR -67 141 20 310 344 45 0 chr2 92135197 92135351 -161121232 - LTR16A LTR ERVL -34 416 256 488 274 24 24 chr2 92135382 92135546 -161121037 - LTR16A1 LTR ERVL -293 164 1 230 273 15 0 chr2 92135680 92135746 -161120837 + MIR SINE MIR 70 136 -72 1994 144 7 102 chr2 92135898 92136329 -161120254 - MLT1B LTR MaLR 0 390 1 624 205 0 0 chr2 92136475 92136641 -161119942 + (TG)n Simple_repeat Simple_repeat 1 166 0 278 154 0 15 chr2 92136663 92136728 -161119855 + (TG)n Simple_repeat Simple_repeat 1 64 0 1984 159 0 18 chr2 92137337 92137671 -161118912 + L1MA7 LINE L1 5605 5932 -359 2269 127 8 42 chr2 92137672 92138049 -161118534 + THE1B LTR MaLR 1 364 0 432 61 0 0 chr2 92138055 92138121 -161118462 + L1MA7 LINE L1 6226 6291 0 2859 73 22 68 chr2 92138369 92138555 -161118028 - L1PB1 LINE L1 0 6151 5958 2020 141 6 6 chr2 92138555 92138867 -161117716 - AluSq SINE Alu -1 312 1 2859 73 22 68 chr2 92138867 92139134 -161117449 - L1PB1 LINE L1 -193 5958 5719 2095 330 35 47 chr2 92139318 92140372 -161116211 + ERVL LTR ERVL 2763 3804 -1960 4078 157 107 46 chr2 92140377 92141180 -161115403 + MER21B LTR ERV1 1 852 -11 1086 274 28 52 chr2 92141194 92141388 -161115195 + ERVL LTR ERVL 3778 3975 -1679 2037 121 10 0 chr2 92141388 92141686 -161114897 - AluSx SINE Alu -11 301 1 1086 274 28 52 chr2 92141686 92141914 -161114669 + ERVL LTR ERVL 3975 4190 -1464 1564 228 26 48 chr2 92141943 92142486 -161114097 + L1MC5 LINE L1 7312 7842 -119 1039 107 13 0 chr2 92142586 92142736 -161113847 - MSTA LTR MaLR -276 152 1 244 263 143 85 chr2 92143464 92143757 -161112826 - L3 LINE CR1 -73 1504 1195 470 206 73 115 chr2 92144276 92144494 -161112089 - LTR67 LTR ERVL -348 209 1 2066 217 21 5 chr2 92144925 92145344 -161111239 + MER57B LTR ERV1 9 434 0 333 333 45 39 chr2 92145348 92145416 -161111167 - L2 LINE L2 -14 3258 3192 1652 176 0 34 chr2 92145416 92145739 -161110844 + AluJo SINE Alu 1 312 0 333 333 45 39 chr2 92145739 92145826 -161110757 - L2 LINE L2 -80 3192 3102 280 91 0 0 chr2 92146966 92147010 -161109573 + Alu SINE Alu 258 301 0 216 241 190 9 chr2 92147165 92147281 -161109302 + MIR3 SINE MIR 1 137 -71 2127 110 0 0 chr2 92147349 92147640 -161108943 + AluSx SINE Alu 1 291 -21 1439 183 63 42 chr2 92147882 92148216 -161108367 + MER58B DNA MER1_type 1 341 0 1358 239 108 14 chr2 92148220 92148580 -161108003 + MLT1E LTR MaLR 8 401 -192 301 283 66 81 chr2 92148637 92148835 -161107748 - L1MC/D LINE L1 -1983 5825 5631 640 265 39 34 chr2 92148877 92149081 -161107502 + MIR SINE MIR 12 216 -46 1918 131 7 0 chr2 92149194 92149484 -161107099 - AluSx SINE Alu -20 292 1 490 287 112 24 chr2 92149588 92149839 -161106744 + L3 LINE CR1 1229 1501 -76 264 269 26 0 chr2 92150190 92150284 -161106299 - MIR SINE MIR -92 116 16 187 397 0 0 chr2 92150370 92150443 -161106140 + MIR SINE MIR 20 92 -170 183 266 64 53 chr2 92151014 92151108 -161105475 - MIR3 SINE MIR -54 154 60 510 279 34 11 chr2 92151321 92151500 -161105083 - MIR SINE MIR -32 230 48 711 188 221 0 chr2 92151743 92151897 -161104686 - MER5A DNA MER1_type 0 189 2 264 258 227 15 chr2 92152049 92152181 -161104402 + MIR SINE MIR 98 257 -5 1846 248 141 2 chr2 92152932 92153125 -161103458 - MLT2F LTR ERVL -56 607 442 2030 175 42 11 chr2 92153125 92153503 -161103080 - MLT1B LTR MaLR 0 390 1 1846 248 141 2 chr2 92153503 92153842 -161102741 - MLT2F LTR ERVL -221 442 1 959 212 95 82 chr2 92153845 92154246 -161102337 - ERVL-F LTR ERVL -11 5753 5348 192 163 0 0 chr2 92154459 92154502 -161102081 + CT-rich Low_complexity Low_complexity 2 44 0 216 156 0 44 chr2 92154646 92154691 -161101892 + T-rich Low_complexity Low_complexity 3 45 0 183 354 174 7 chr2 92155008 92155152 -161101431 + MIR SINE MIR 20 187 -75 1674 266 77 17 chr2 92155596 92156471 -161100112 - L1MDa LINE L1 -5195 1345 18 553 162 77 111 chr2 92156473 92156707 -161099876 + L1MC5 LINE L1 7631 7856 -105 1132 145 149 4 chr2 92156745 92157021 -161099562 - MER33 DNA MER1_type -8 316 1 21 36 0 0 chr2 92157055 92157083 -161099500 + AT_rich Low_complexity Low_complexity 1 28 0 254 306 0 47 chr2 92157309 92157394 -161099189 + L2 LINE L2 3233 3313 0 210 340 153 7 chr2 92157469 92157613 -161098970 - MIR SINE MIR -49 213 49 855 171 104 76 chr2 92157756 92158007 -161098576 + MLT1E2 LTR MaLR 1 258 -368 369 0 0 0 chr2 92158195 92158236 -161098347 + (CA)n Simple_repeat Simple_repeat 2 42 0 25 0 0 0 chr2 92158872 92158897 -161097686 + AT_rich Low_complexity Low_complexity 1 25 0 221 296 82 10 chr2 92159199 92159297 -161097286 + MIR3 SINE MIR 83 187 -21 1340 169 47 35 chr2 92160076 92160140 -161096443 + AluJo SINE Alu 1 63 -249 2241 117 38 6 chr2 92160140 92160483 -161096100 + THE1A LTR MaLR 1 354 -1 11921 93 10 1 chr2 92160484 92162049 -161094534 + THE1A-int LTR MaLR 1 1580 0 1952 145 75 6 chr2 92162049 92162381 -161094202 + THE1A LTR MaLR 1 355 0 1340 169 47 35 chr2 92162381 92162599 -161093984 + AluJo SINE Alu 62 287 -25 415 0 0 0 chr2 92162599 92162645 -161093938 + (TAAA)n Simple_repeat Simple_repeat 3 132 0 2188 116 0 3 chr2 92163033 92163325 -161093258 + AluSx SINE Alu 1 291 -21 1677 202 48 18 chr2 92163706 92163964 -161092619 + MER58B DNA MER1_type 1 273 -2147 2371 136 103 5 chr2 92163964 92164354 -161092229 + MSTA LTR MaLR 1 428 0 1677 202 48 18 chr2 92164354 92164426 -161092157 + MER58B DNA MER1_type 273 341 0 2708 121 32 69 chr2 92165591 92166096 -161090487 - MER66B LTR ERV1 0 486 1 460 242 16 16 chr2 92166353 92166481 -161090102 - MLT1L LTR MaLR -2 613 486 1624 222 52 89 chr2 92166493 92167080 -161089503 - MLT1F1 LTR MaLR -2 565 1 375 209 266 13 chr2 92167253 92167411 -161089172 - MLT1L LTR MaLR -331 284 87 796 278 102 75 chr2 92167488 92168045 -161088538 + MLT1L LTR MaLR 42 613 -2 376 249 36 42 chr2 92168147 92168312 -161088271 - L2 LINE L2 -597 2717 2554 643 226 89 16 chr2 92168970 92169160 -161087423 - AluJo SINE Alu -106 206 3 2167 110 3 13 chr2 92169168 92169467 -161087116 - AluSx SINE Alu -16 296 1 36 53 0 0 chr2 92169501 92169558 -161087025 + AT_rich Low_complexity Low_complexity 1 57 0 846 157 0 8 chr2 92169562 92169696 -161086887 - FLAM_C SINE Alu 0 133 1 2511 70 0 0 chr2 92169700 92170000 -161086583 - AluY SINE Alu -11 300 1 1159 164 58 0 chr2 92170039 92170247 -161086336 - AluJo SINE Alu -8 304 85 510 210 0 57 chr2 92170247 92170371 -161086212 - FAM SINE Alu -60 125 9 739 167 28 21 chr2 92171109 92171253 -161085330 - L1MB7 LINE L1 -19 6165 6021 900 64 0 0 chr2 92171253 92171363 -161085220 + AluSg/x SINE Alu 200 309 -3 1068 128 10 190 chr2 92171364 92171570 -161085013 - L1MB7 LINE L1 -153 6031 5896 1713 133 0 0 chr2 92171570 92171804 -161084779 - AluSx SINE Alu -73 239 6 1068 128 10 190 chr2 92171804 92171902 -161084681 - L1MB7 LINE L1 -288 5896 5782 837 156 0 94 chr2 92171902 92171959 -161084624 - MER46A DNA MER2_type -2495 236 175 2565 54 3 0 chr2 92171959 92172254 -161084329 - AluSp SINE Alu -15 298 3 837 156 0 94 chr2 92172254 92172376 -161084207 - MER46A DNA MER2_type -2556 175 74 376 167 139 0 chr2 92172810 92172882 -161083701 - MER46A DNA MER2_type -154 82 1 2117 166 36 110 chr2 92172882 92173304 -161083279 - L1MB7 LINE L1 -401 5783 5404 1761 179 3 7 chr2 92173304 92173611 -161082972 - AluJo SINE Alu -6 306 1 2117 166 36 110 chr2 92173611 92173858 -161082725 - L1MB7 LINE L1 -780 5404 5140 240 35 0 0 chr2 92174071 92174100 -161082483 + (TTTTC)n Simple_repeat Simple_repeat 3 31 0 225 154 0 0 chr2 92174816 92174855 -161081728 + GA-rich Low_complexity Low_complexity 2 40 0 251 333 62 48 chr2 92175135 92175345 -161081238 + MIR SINE MIR 2 214 -48 2365 95 0 3 chr2 92175508 92175813 -161080770 - AluSc SINE Alu -5 304 1 683 130 0 10 chr2 92176018 92176118 -161080465 + U6 snRNA snRNA 3 101 -6 21 0 0 0 chr2 92176118 92176139 -161080444 + AT_rich Low_complexity Low_complexity 1 21 0 209 32 0 32 chr2 92176214 92176245 -161080338 + (TTTTC)n Simple_repeat Simple_repeat 3 32 0 * 264 59 0 0 chr2 92176244 92176278 -161080305 + (TCCC)n Simple_repeat Simple_repeat 3 36 0 1889 166 3 3 chr2 92176278 92176580 -161080003 - AluJb SINE Alu -10 302 1 894 144 7 0 chr2 92176608 92176761 -161079822 - L1MA9 LINE L1 -2 6310 6157 2558 53 0 3 chr2 92176770 92177072 -161079511 - AluY SINE Alu -10 301 1 1683 152 56 36 chr2 92177096 92177398 -161079185 + AluJb SINE Alu 1 308 -4 2337 100 0 0 chr2 92177761 92178060 -161078523 + AluSx SINE Alu 3 301 -11 2824 218 78 26 chr2 92178094 92178538 -161078045 - L1ME2 LINE L1 -9 6155 5736 1192 164 101 140 chr2 92178538 92178897 -161077686 - MSTD LTR MaLR -4 392 49 1724 188 7 0 chr2 92178897 92179200 -161077383 + AluJo SINE Alu 1 305 -7 1192 164 101 140 chr2 92179200 92179248 -161077335 - MSTD LTR MaLR -347 49 1 2824 218 78 26 chr2 92179248 92179338 -161077245 - L1ME2 LINE L1 -428 5736 5652 2115 108 3 45 chr2 92179338 92179652 -161076931 - AluSg1 SINE Alu -8 301 1 2824 218 78 26 chr2 92179652 92179923 -161076660 - L1ME2 LINE L1 -512 5652 5307 344 87 0 0 chr2 92179925 92179971 -161076612 + Alu SINE Alu 1 46 -257 258 330 28 9 chr2 92179988 92180094 -161076489 + MIR SINE MIR 103 210 -52 443 125 188 0 chr2 92180137 92180217 -161076366 + AluJb SINE Alu 167 261 -51 448 179 0 0 chr2 92180227 92180305 -161076278 + FLAM SINE Alu 48 125 -18 1710 165 10 7 chr2 92180362 92180653 -161075930 - AluSq SINE Alu -21 292 1 637 284 116 9 chr2 92180670 92180997 -161075586 - L1ME2 LINE L1 -884 5262 4901 2090 110 7 14 chr2 92181007 92181297 -161075286 + AluSx SINE Alu 1 288 -24 26 30 0 0 chr2 92181388 92181421 -161075162 + AT_rich Low_complexity Low_complexity 1 33 0 333 291 9 18 chr2 92181447 92181557 -161075026 - L1ME2 LINE L1 -2730 3416 3308 333 0 0 0 chr2 92182300 92182337 -161074246 + (CA)n Simple_repeat Simple_repeat 2 38 0 290 284 37 37 chr2 92183081 92183215 -161073368 - L1ME3A LINE L1 0 6170 6037 607 249 126 50 chr2 92183344 92183661 -161072922 - L1ME3A LINE L1 -208 5962 5622 1629 167 4 25 chr2 92183774 92184050 -161072533 + AluJo SINE Alu 24 293 -19 1435 188 40 23 chr2 92184067 92184568 -161072015 + MLT1F1 LTR MaLR 1 561 -6 188 152 43 0 chr2 92184706 92184752 -161071831 + CT-rich Low_complexity Low_complexity 1 48 0 260 236 12 36 chr2 92184802 92184967 -161071616 + CT-rich Low_complexity Low_complexity 3 163 0 1520 145 31 200 chr2 92185119 92185628 -161070955 + MSTA LTR MaLR 4 426 0 1994 115 0 37 chr2 92185725 92186054 -161070529 - AluSx SINE Alu 0 318 1 793 170 0 15 chr2 92186605 92186740 -161069843 + FLAM_C SINE Alu 1 133 0 1813 164 7 20 chr2 92186745 92187050 -161069533 + AluJb SINE Alu 1 301 -11 1580 190 10 33 chr2 92187055 92187360 -161069223 + AluJo SINE Alu 1 298 -14 403 197 0 0 chr2 92187898 92187964 -161068619 - MER2 DNA MER2_type 0 345 280 1804 133 18 11 chr2 92188000 92188029 -161068554 - MER2 DNA MER2_type -58 287 260 1740 161 3 33 chr2 92188029 92188334 -161068249 + AluJb SINE Alu 3 298 -14 1804 133 18 11 chr2 92188334 92188589 -161067994 - MER2 DNA MER2_type -85 260 1 520 218 201 38 chr2 92188947 92189286 -161067297 - Charlie2 DNA MER1_type -1 2861 2468 1837 156 0 10 chr2 92189292 92189581 -161067002 + AluJo SINE Alu 13 298 -14 827 235 61 31 chr2 92189793 92190087 -161066496 - Charlie2b DNA MER1_type -936 1846 1544 678 212 0 0 chr2 92190090 92190208 -161066375 - FLAM_C SINE Alu -15 118 1 664 267 16 0 chr2 92190333 92190524 -161066059 + L1MC5 LINE L1 7723 7916 -45 1589 181 33 37 chr2 92190537 92190836 -161065747 + AluJo SINE Alu 1 298 -14 1934 120 51 4 chr2 92190909 92191184 -161065399 + AluSx SINE Alu 1 288 -24 375 243 10 0 chr2 92191210 92191313 -161065270 - Charlie2b DNA MER1_type -1340 1442 1339 1454 172 0 9 chr2 92191327 92191559 -161065024 + AluJo SINE Alu 1 230 -82 598 168 8 40 chr2 92191561 92191686 -161064897 + AluSg/x SINE Alu 189 309 0 407 179 0 0 chr2 92191756 92191823 -161064760 + U6 snRNA snRNA 7 73 -34 2495 63 7 0 chr2 92191823 92192123 -161064460 - AluSp SINE Alu -11 302 1 28 0 0 0 chr2 92192127 92192155 -161064428 + AT_rich Low_complexity Low_complexity 1 28 0 229 224 0 17 chr2 92192155 92192213 -161064370 - Charlie2b DNA MER1_type -1576 1206 1150 2446 65 7 3 chr2 92192534 92192844 -161063739 - AluY SINE Alu 0 311 1 2231 134 11 19 chr2 92192954 92193303 -161063280 - L1MB5 LINE L1 0 6174 5827 2047 145 3 13 chr2 92193303 92193613 -161062970 - AluJo SINE Alu -5 307 1 2231 134 11 19 chr2 92193613 92193628 -161062955 - L1MB5 LINE L1 -347 5827 5813 2053 124 0 10 chr2 92193656 92193947 -161062636 + AluSx SINE Alu 1 288 -24 2406 94 0 0 chr2 92195350 92195649 -161060934 - AluSx SINE Alu -13 299 1 3405 125 40 75 chr2 92195697 92196098 -161060485 - L1MB4 LINE L1 -57 6123 5709 2412 75 0 0 chr2 92196098 92196391 -161060192 + AluSq SINE Alu 1 293 -20 3405 125 40 75 chr2 92196391 92196533 -161060050 - L1MB4 LINE L1 -471 5709 5604 2995 68 2 10 chr2 92196533 92196933 -161059650 - L1PB1 LINE L1 -1 6150 5754 3405 125 40 75 chr2 92196933 92197045 -161059538 - L1MB4 LINE L1 -576 5604 5490 1308 125 5 15 chr2 92197045 92197245 -161059338 - AluSq SINE Alu -11 302 105 2272 107 0 3 chr2 92197438 92197736 -161058847 - AluSx SINE Alu -15 297 1 1315 129 5 5 chr2 92197840 92198042 -161058541 - Tigger1 DNA MER2_type 0 2418 2217 690 169 0 8 chr2 92198048 92198166 -161058417 + FLAM_C SINE Alu 5 121 -22 11051 105 15 30 chr2 92198179 92198822 -161057761 - Tigger1 DNA MER2_type -188 2230 1579 1943 97 0 8 chr2 92198822 92199081 -161057502 - AluSg SINE Alu -15 295 39 11051 105 15 30 chr2 92199081 92200108 -161056475 - Tigger1 DNA MER2_type -839 1579 585 1645 139 8 0 chr2 92200143 92200395 -161056188 + AluJb SINE Alu 58 311 -1 784 161 8 0 chr2 92200402 92200532 -161056051 - Tigger1 DNA MER2_type -2118 300 170 535 167 0 0 chr2 92200534 92200618 -161055965 + AluSg/x SINE Alu 191 274 -38 562 152 65 0 chr2 92200618 92200710 -161055873 - Tigger1 DNA MER2_type -2260 158 61 843 160 0 0 chr2 92200726 92200851 -161055732 - AluJb SINE Alu -187 125 1 356 197 0 14 chr2 92200851 92200922 -161055661 - Tigger1 DNA MER2_type -2343 75 6 3036 97 14 2 chr2 92200923 92201347 -161055236 + L1PA10 LINE L1 5729 6157 -11 415 186 43 0 chr2 92201663 92201733 -161054850 - MER30 DNA MER1_type 0 230 158 2399 87 3 13 chr2 92202064 92202375 -161054208 + AluSq SINE Alu 1 308 -5 2369 57 3 14 chr2 92202375 92202670 -161053913 + AluY SINE Alu 1 293 -18 270 0 0 0 chr2 92202670 92202700 -161053883 + (CA)n Simple_repeat Simple_repeat 2 31 0 300 250 0 0 chr2 92203242 92203314 -161053269 + MIR SINE MIR 58 129 -133 3431 117 34 2 chr2 92203318 92203814 -161052769 + MER75 DNA T2_type 3 514 0 226 260 52 0 chr2 92203983 92204060 -161052523 + GA-rich Low_complexity Low_complexity 4 84 0 758 211 112 100 chr2 92204740 92204888 -161051695 + Tigger7 DNA MER2_type 2 156 -2331 2027 157 0 3 chr2 92204888 92205201 -161051382 + AluSx SINE Alu 1 312 0 758 211 112 100 chr2 92205201 92205312 -161051271 + Tigger7 DNA MER2_type 156 264 -2223 636 170 10 0 chr2 92205357 92205457 -161051126 + Tigger7 DNA MER2_type 2391 2491 0 552 271 43 0 chr2 92205457 92205597 -161050986 - MIR SINE MIR -105 157 12 31 0 0 0 chr2 92205984 92206015 -161050568 + AT_rich Low_complexity Low_complexity 1 31 0 258 116 0 0 chr2 92206362 92206405 -161050178 + (TATG)n Simple_repeat Simple_repeat 2 44 0 247 322 59 8 chr2 92206448 92206566 -161050017 + MIR3 SINE MIR 38 161 -47 1714 160 17 13 chr2 92207635 92207935 -161048648 + AluJo SINE Alu 5 305 -7 2330 72 0 10 chr2 92208020 92208311 -161048272 - AluY SINE Alu -23 288 1 188 226 19 19 chr2 92208826 92208879 -161047704 + L2 LINE L2 3255 3307 -6 225 246 15 15 chr2 92209006 92209071 -161047512 + MLT1J1 LTR MaLR 96 160 -286 249 161 62 86 chr2 92209239 92209260 -161047323 + MLT1J2 LTR MaLR 370 390 -60 2160 146 20 62 chr2 92209260 92209488 -161047095 - MLT1B LTR MaLR -2 388 183 2189 122 3 0 chr2 92209488 92209782 -161046801 - AluSx SINE Alu -17 295 1 2160 146 20 62 chr2 92209782 92209958 -161046625 - MLT1B LTR MaLR -207 183 1 249 161 62 86 chr2 92209958 92210017 -161046566 + MLT1J2 LTR MaLR 390 448 -2 520 256 18 18 chr2 92210134 92210298 -161046285 + MER5A DNA MER1_type 3 166 -23 208 303 199 19 chr2 92210976 92211388 -161045195 - L2 LINE L2 -545 2769 2284 1130 202 13 4 chr2 92211388 92211626 -161044957 + Tigger6 DNA MER2_type 1 240 -843 194 214 89 0 chr2 92212067 92212123 -161044460 + MIR SINE MIR 117 177 -85 255 295 34 42 chr2 92212551 92212725 -161043858 + MIR SINE MIR 17 189 -73 572 137 10 0 chr2 92213058 92213160 -161043423 + CT-rich Low_complexity Low_complexity 1 103 0 575 269 110 35 chr2 92213211 92213501 -161043082 - L2 LINE L2 -1 3312 3001 1720 122 4 0 chr2 92214245 92214490 -161042093 - AluSx SINE Alu -66 246 1 409 209 0 35 chr2 92214972 92215058 -161041525 + MIR SINE MIR 109 191 -71 288 0 0 0 chr2 92215071 92215103 -161041480 + (CA)n Simple_repeat Simple_repeat 2 33 0 2093 94 7 3 chr2 92215215 92215502 -161041081 - AluSc SINE Alu -21 288 1 305 357 81 27 chr2 92215597 92215782 -161040801 + L3 LINE CR1 304 498 -1079 307 304 182 13 chr2 92216034 92216109 -161040474 + L3 LINE CR1 721 782 -795 1515 173 19 38 chr2 92216109 92216427 -161040156 + AluJo SINE Alu 1 312 0 307 304 182 13 chr2 92216427 92216664 -161039919 + L3 LINE CR1 782 1086 -491 1186 211 143 48 chr2 92216673 92217094 -161039489 + MLT1C LTR MaLR 7 467 0 427 237 15 44 chr2 92217317 92217452 -161039131 - L2 LINE L2 -1 3312 3182 271 261 144 27 chr2 92218981 92219092 -161037491 - L2 LINE L2 -16 3297 3174 2132 180 135 29 chr2 92219423 92219950 -161036633 + MER119 DNA MER1_type 1 583 0 920 225 21 5 chr2 92221313 92221504 -161035079 + MIR SINE MIR 52 245 -17 1574 176 42 0 chr2 92221553 92221842 -161034741 - AluJo SINE Alu -10 302 2 237 302 135 10 chr2 92222691 92222787 -161033796 - L2 LINE L2 0 3313 3206 398 289 23 39 chr2 92222837 92222965 -161033618 + MIR SINE MIR 18 143 -65 1667 185 31 34 chr2 92222971 92223322 -161033261 - MLT1A1 LTR MaLR -6 359 10 215 333 51 7 chr2 92223432 92223570 -161033013 - MIR3 SINE MIR -51 157 14 505 158 80 10 chr2 92223663 92223774 -161032809 + L1MA8 LINE L1 6028 6136 -155 2175 106 3 0 chr2 92224244 92224608 -161031975 - AluSq SINE Alu 0 365 1 489 256 67 11 chr2 92224762 92224942 -161031641 - MLT1L LTR MaLR -4 611 422 257 227 136 0 chr2 92225025 92225113 -161031470 - MLT1L LTR MaLR -373 242 143 257 202 169 34 chr2 92225215 92225304 -161031279 - L2 LINE L2 -6 3307 3207 454 238 163 6 chr2 92225351 92225511 -161031072 + MIR SINE MIR 78 262 0 1792 169 0 3 chr2 92225511 92225812 -161030771 + AluJo SINE Alu 1 300 -12 1737 208 102 9 chr2 92225858 92226291 -161030292 - Charlie4a DNA MER1_type -19 489 17 2123 121 0 0 chr2 92226440 92226738 -161029845 + AluSx SINE Alu 1 298 -14 458 216 52 52 chr2 92226996 92227149 -161029434 + MIR3 SINE MIR 1 153 -55 285 75 0 0 chr2 92227219 92227259 -161029324 + (TG)n Simple_repeat Simple_repeat 1 40 0 210 180 20 20 chr2 92227981 92228031 -161028552 + G-rich Low_complexity Low_complexity 6 55 0 529 287 163 5 chr2 92229644 92229853 -161026730 + MIR SINE MIR 3 244 -18 2025 169 29 54 chr2 92230277 92230686 -161025897 - MER47B DNA MER2_type 0 418 20 259 327 67 0 chr2 92230698 92230802 -161025781 - MIR SINE MIR -70 138 28 291 28 0 0 chr2 92230842 92230878 -161025705 + (TG)n Simple_repeat Simple_repeat 2 37 0 1647 156 56 38 chr2 92230892 92231231 -161025352 - MLT1B LTR MaLR -39 351 7 537 281 85 35 chr2 92231771 92231970 -161024613 + MIR SINE MIR 33 241 -21 785 221 154 17 chr2 92231972 92232212 -161024371 + ORSL DNA AcHobo 1 273 -2 312 259 9 27 chr2 92234717 92234829 -161021754 + L2 LINE L2 2987 3096 -176 2079 114 0 10 chr2 92234934 92235241 -161021342 - AluSx SINE Alu -8 304 1 243 352 130 0 chr2 92235273 92235381 -161021202 + L2 LINE L2 3151 3272 0 262 307 47 73 chr2 92235490 92235640 -161020943 + L3 LINE CR1 954 1099 -478 303 219 38 0 chr2 92235773 92235878 -161020705 + GA-rich Low_complexity Low_complexity 1 109 0 740 250 113 0 chr2 92235982 92236194 -161020389 - MIR SINE MIR -13 249 14 219 318 0 0 chr2 92236202 92236268 -161020315 + MIR SINE MIR 183 248 -14 4156 126 66 47 chr2 92236761 92237706 -161018877 + L1MB7 LINE L1 5082 6041 -143 876 2 94 0 chr2 92237807 92238133 -161018450 + GA-rich Low_complexity Low_complexity 1 537 0 277 283 113 47 chr2 92238241 92238368 -161018215 - MIR SINE MIR -66 142 11 1704 108 0 0 chr2 92238637 92238869 -161017714 - AluSg/x SINE Alu -15 297 66 207 369 154 0 chr2 92238870 92239000 -161017583 - MIR SINE MIR -55 207 58 197 339 0 0 chr2 92239014 92239070 -161017513 - L2 LINE L2 -10 3303 3248 640 230 172 5 chr2 92239343 92239547 -161017036 + MIR SINE MIR 25 262 0 197 311 122 11 chr2 92239668 92239758 -161016825 - MIR SINE MIR -63 145 46 1112 188 48 0 chr2 92240910 92241118 -161015465 - AluJo SINE Alu -94 218 1 829 109 39 8 chr2 92241128 92241256 -161015327 - AluSg/x SINE Alu -16 294 163 232 211 70 18 chr2 92241285 92241342 -161015241 - MER5B DNA MER1_type -117 61 2 1043 163 149 9 chr2 92241769 92241984 -161014599 + L1M3 LINE L1 5429 5673 -498 723 136 25 12 chr2 92241987 92242149 -161014434 - AluSg/x SINE Alu -9 301 138 1845 123 15 0 chr2 92242324 92242592 -161013991 + AluSx SINE Alu 33 304 -8 741 141 63 0 chr2 92242592 92242734 -161013849 - MER53 DNA DNA -16 173 23 2108 105 0 7 chr2 92242787 92243115 -161013468 + AluSx SINE Alu 1 326 0 680 141 0 61 chr2 92243115 92243138 -161013445 + L1M4 LINE L1 4391 4414 -1732 1790 120 4 4 chr2 92243138 92243412 -161013171 + AluSx SINE Alu 39 312 0 680 141 0 61 chr2 92243412 92243551 -161013032 + L1M4 LINE L1 4414 4543 -1603 981 151 0 54 chr2 92243551 92243736 -161012847 - AluJb SINE Alu -18 294 120 39 0 0 0 chr2 92244108 92244147 -161012436 + AT_rich Low_complexity Low_complexity 1 39 0 724 165 9 0 chr2 92244152 92244267 -161012316 - AluSq/x SINE Alu -195 117 2 256 221 52 26 chr2 92244344 92244421 -161012162 + L1ME4a LINE L1 5964 6042 -79 2037 127 7 0 chr2 92244533 92244833 -161011750 + AluSx SINE Alu 1 302 -10 2158 94 3 0 chr2 92244833 92245130 -161011453 + AluSp SINE Alu 1 299 -14 221 261 36 91 chr2 92246557 92246722 -161009861 - L2 LINE L2 -201 3071 2916 1814 109 49 0 chr2 92246956 92247223 -161009360 + AluSx SINE Alu 1 280 -32 2056 92 10 10 chr2 92247474 92247769 -161008814 + AluSc SINE Alu 1 295 -14 316 280 0 0 chr2 92247875 92247950 -161008633 + Charlie8 DNA MER1_type 1 75 -2342 276 169 31 62 chr2 92248014 92248079 -161008504 + Charlie8 DNA MER1_type 1363 1418 -999 390 346 138 31 chr2 92248391 92248781 -161007802 + L1ME LINE L1 5346 5777 -344 1574 167 4 0 chr2 92248805 92249063 -161007520 - AluJo SINE Alu -31 281 23 1682 170 85 108 chr2 92249066 92249343 -161007240 + MSTB LTR MaLR 1 266 -160 1945 160 0 10 chr2 92249343 92249655 -161006928 - AluSx SINE Alu -2 310 2 1682 170 85 108 chr2 92249655 92249813 -161006770 + MSTB LTR MaLR 266 426 0 2523 180 37 24 chr2 92249813 92250161 -161006422 + MSTB-int LTR MaLR 1 360 -1291 2267 88 3 3 chr2 92250161 92250466 -161006117 - AluSx SINE Alu -7 305 1 2523 180 37 24 chr2 92250466 92250657 -161005926 + MSTB-int LTR MaLR 360 547 -1104 1479 112 0 0 chr2 92250673 92250878 -161005705 + AluSg/x SINE Alu 98 302 -10 233 306 0 0 chr2 92251039 92251101 -161005482 + MER91 DNA MER1_type 79 140 0 21 36 0 0 chr2 92251411 92251439 -161005144 + AT_rich Low_complexity Low_complexity 1 28 0 984 174 12 24 chr2 92251485 92251652 -161004931 - FAM SINE Alu -7 168 4 423 231 122 0 chr2 92251841 92251988 -161004595 - MER103 DNA DNA 0 166 2 305 313 130 0 chr2 92252252 92252367 -161004216 + MIR3 SINE MIR 30 159 -49 1144 242 141 69 chr2 92252369 92252874 -161003709 + MER20B DNA MER1_type 17 557 -226 1836 105 59 21 chr2 92252956 92253242 -161003341 + AluSq SINE Alu 1 297 -16 1114 135 0 0 chr2 92253242 92253412 -161003171 + AluSg/x SINE Alu 134 303 -9 1932 110 3 64 chr2 92253415 92253742 -161002841 + AluSx SINE Alu 1 307 -5 467 163 0 35 chr2 92253744 92253830 -161002753 - AluJo/FLAM SINE Alu -184 128 46 251 248 54 60 chr2 92253965 92254114 -161002469 + MER20B DNA MER1_type 627 774 -9 297 195 37 21 chr2 92255216 92255323 -161001260 + L1M4 LINE L1 5479 5588 -580 741 185 0 0 chr2 92255705 92255883 -161000700 + (AGTAG)n Simple_repeat Simple_repeat 3 180 0 387 231 94 51 chr2 92256140 92256257 -161000326 - L2 LINE L2 0 3272 3151 2104 98 3 19 chr2 92256523 92256839 -160999744 - AluSx SINE Alu -1 311 1 419 227 93 19 chr2 92257015 92257198 -160999385 + MLT1J LTR MaLR 1 158 -292 2045 110 10 13 chr2 92257245 92257418 -160999165 - AluSx SINE Alu -4 308 135 2147 40 50 40 chr2 92257418 92257716 -160998867 - AluY SINE Alu -10 301 1 2045 110 10 13 chr2 92257716 92257851 -160998732 - AluSx SINE Alu -177 135 1 2124 77 31 3 chr2 92258198 92258484 -160998099 + AluSg SINE Alu 1 294 -16 277 271 8 85 chr2 92258574 92258692 -160997891 - MIR SINE MIR -2 260 152 346 198 99 50 chr2 92258761 92258817 -160997766 + MIR SINE MIR 136 188 -74 444 326 65 0 chr2 92258817 92259001 -160997582 + MER91A DNA MER1_type 1 196 0 346 198 99 50 chr2 92259001 92259065 -160997518 + MIR SINE MIR 188 262 0 277 307 40 0 chr2 92259074 92259149 -160997434 - MIR SINE MIR -109 153 76 1946 95 67 7 chr2 92259192 92259476 -160997107 + AluSg SINE Alu 1 301 -9 375 244 134 24 chr2 92259492 92259619 -160996964 + L1MC/D LINE L1 5328 5468 -2340 1676 171 0 16 chr2 92259651 92259967 -160996616 + AluJo SINE Alu 2 312 0 237 253 38 124 chr2 92260086 92260272 -160996311 + MER5A DNA MER1_type 20 189 0 234 0 0 0 chr2 92260681 92260707 -160995876 + (ATTTG)n Simple_repeat Simple_repeat 2 27 0 814 211 0 13 chr2 92260707 92260859 -160995724 - AluJb SINE Alu -26 286 137 261 278 35 43 chr2 92261143 92261176 -160995407 + L2 LINE L2 3200 3232 -81 2103 95 34 0 chr2 92261176 92261470 -160995113 - AluSg1 SINE Alu -5 304 1 261 278 35 43 chr2 92261470 92261551 -160995032 + L2 LINE L2 3232 3313 0 291 167 14 58 chr2 92261635 92261773 -160994810 + CT-rich Low_complexity Low_complexity 1 132 0 1577 147 72 17 chr2 92261796 92261975 -160994608 - AluSg SINE Alu 0 458 290 198 0 0 0 chr2 92261975 92261997 -160994586 + (GAAA)n Simple_repeat Simple_repeat 1 22 0 1577 147 72 17 chr2 92261997 92262259 -160994324 - AluSg SINE Alu -168 290 1 618 75 0 0 chr2 92262354 92262434 -160994149 - MADE1 DNA Mariner 0 80 1 1963 132 0 28 chr2 92262516 92262835 -160993748 + AluJo SINE Alu 1 310 -2 1888 148 3 10 chr2 92262920 92263225 -160993358 - AluSx SINE Alu -8 304 2 2140 107 0 3 chr2 92263459 92263758 -160992825 - AluSq SINE Alu -15 298 1 457 207 5 113 chr2 92263787 92263882 -160992701 - MER113 DNA MER1_type? -307 214 155 1778 173 13 7 chr2 92263882 92264182 -160992401 + AluJo SINE Alu 1 302 -10 457 207 5 113 chr2 92264182 92264308 -160992275 - MER113 DNA MER1_type? -366 155 17 305 320 40 15 chr2 92264423 92264623 -160991960 - L2 LINE L2 -559 2755 2551 1853 151 7 17 chr2 92264759 92265057 -160991526 + AluJo SINE Alu 3 297 -15 1094 148 32 60 chr2 92265104 92265173 -160991410 - MLT1B LTR MaLR 0 390 321 2305 120 0 0 chr2 92265173 92265481 -160991102 + AluSx SINE Alu 1 308 -4 1094 148 32 60 chr2 92265481 92265627 -160990956 - MLT1B LTR MaLR -69 321 181 834 275 26 4 chr2 92265772 92266005 -160990578 + MIR SINE MIR 19 256 -6 251 269 94 65 chr2 92266252 92266453 -160990130 - L2 LINE L2 -2789 525 319 445 169 0 0 chr2 92267330 92267401 -160989182 + AluS SINE Alu 2 72 -238 2458 82 0 0 chr2 92267653 92267959 -160988624 + AluY SINE Alu 1 306 -5 1003 91 0 0 chr2 92268267 92268399 -160988184 + AluSg/x SINE Alu 181 312 0 2152 102 54 3 chr2 92268446 92268741 -160987842 + AluSq SINE Alu 1 310 -3 426 329 55 52 chr2 92268799 92269182 -160987401 - L1MEd LINE L1 -5136 983 600 1830 193 14 9 chr2 92269273 92269621 -160986962 + MLT1A1 LTR MaLR 12 361 -4 2443 86 0 0 chr2 92269975 92270266 -160986317 - AluSc SINE Alu -18 291 1 225 0 0 0 chr2 92270554 92270579 -160986004 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 466 149 160 11 chr2 92270586 92270680 -160985903 - FLAM_C SINE Alu -34 109 2 2213 128 0 0 chr2 92270833 92271137 -160985446 - AluSx SINE Alu -4 308 5 242 274 32 84 chr2 92271627 92271665 -160984918 - L1MEd LINE L1 -4905 1214 1176 2461 90 0 0 chr2 92271665 92271966 -160984617 - AluSx SINE Alu -11 301 1 242 274 32 84 chr2 92271966 92272058 -160984525 - L1MEd LINE L1 -4943 1176 1081 2207 122 0 7 chr2 92272058 92272362 -160984221 - AluSx SINE Alu -10 302 1 242 274 32 84 chr2 92272362 92272515 -160984068 - L1MEd LINE L1 -5038 1081 945 1319 271 77 5 chr2 92272608 92273166 -160983417 - L1M4 LINE L1 -1297 4849 4252 2176 115 0 7 chr2 92273204 92273500 -160983083 - AluSx SINE Alu -18 294 1 654 205 52 40 chr2 92273539 92273788 -160982795 - L1MC5 LINE L1 -50 7911 7660 261 283 121 57 chr2 92273792 92274163 -160982420 - L1MEd LINE L1 -5632 487 93 2203 172 18 62 chr2 92275187 92275456 -160981127 - MLT1C LTR MaLR 0 467 188 2248 91 3 26 chr2 92275456 92275763 -160980820 - AluSp SINE Alu -13 300 1 2203 172 18 62 chr2 92275763 92275776 -160980807 - MLT1C LTR MaLR -279 188 176 2096 77 42 11 chr2 92275776 92276061 -160980522 - AluY SINE Alu -17 294 1 2203 172 18 62 chr2 92276061 92276186 -160980397 - MLT1C LTR MaLR -291 176 81 2298 110 0 0 chr2 92276186 92276494 -160980089 - AluSx SINE Alu -4 308 1 2203 172 18 62 chr2 92276494 92276572 -160980011 - MLT1C LTR MaLR -386 81 1 802 215 18 68 chr2 92277112 92277331 -160979252 + AluJo SINE Alu 87 294 -18 2547 57 0 3 chr2 92277338 92277638 -160978945 + AluY SINE Alu 1 299 -12 196 231 0 0 chr2 92279385 92279424 -160977159 - MIR SINE MIR -62 146 108 2022 73 44 4 chr2 92279890 92280163 -160976420 - AluSg SINE Alu -26 284 1 2125 94 47 17 chr2 92280386 92280684 -160975899 - AluSg SINE Alu -3 307 1 2368 114 34 8 chr2 92280687 92281045 -160975538 - L1PA16 LINE L1 0 6166 5800 200 279 0 16 chr2 92281074 92281135 -160975448 + GA-rich Low_complexity Low_complexity 3 62 0 810 232 88 38 chr2 92281699 92281967 -160974616 + MLT1G1 LTR MaLR 1 250 -305 267 145 13 26 chr2 92282019 92282095 -160974488 + GA-rich Low_complexity Low_complexity 2 76 0 578 237 158 68 chr2 92282110 92282286 -160974297 + MLT1G1 LTR MaLR 312 534 -61 2110 144 0 7 chr2 92282286 92282592 -160973991 + AluSx SINE Alu 1 304 -8 578 237 158 68 chr2 92282592 92282661 -160973922 + MLT1G1 LTR MaLR 534 595 0 196 304 101 14 chr2 92282677 92282774 -160973809 - MIR SINE MIR -70 192 76 1848 152 82 27 chr2 92282774 92283142 -160973441 + MLT1B LTR MaLR 3 390 0 196 304 101 14 chr2 92283142 92283192 -160973391 - MIR SINE MIR -186 76 32 638 307 133 28 chr2 92283504 92283969 -160972614 - L2 LINE L2 -19 3294 2782 2204 119 0 0 chr2 92284107 92284401 -160972182 + AluSx SINE Alu 1 294 -18 1732 200 57 67 chr2 92284640 92285150 -160971433 - MLT1D LTR MaLR 0 505 1 1821 125 31 123 chr2 92285247 92285306 -160971277 - L1PA16 LINE L1 -9 6157 6094 1889 172 0 3 chr2 92285306 92285603 -160970980 + AluJo SINE Alu 1 296 -16 1821 125 31 123 chr2 92285603 92285824 -160970759 - L1PA16 LINE L1 -72 6094 5920 725 150 24 31 chr2 92285824 92285951 -160970632 - FLAM_C SINE Alu -3 130 5 1821 125 31 123 chr2 92285951 92286060 -160970523 - L1PA16 LINE L1 -246 5920 5803 227 333 0 0 chr2 92286205 92286274 -160970309 - MIR SINE MIR 0 262 194 238 315 14 0 chr2 92286465 92286538 -160970045 - HAL1 LINE L1 -671 1836 1763 2039 219 155 36 chr2 92286542 92287100 -160969483 + LTR50 LTR ERVL 5 394 -129 7644 38 18 1 chr2 92287100 92288782 -160967801 - L1PA5 LINE L1 0 6154 4456 2039 219 155 36 chr2 92288782 92288921 -160967662 + LTR50 LTR ERVL 394 515 -8 456 320 51 24 chr2 92289311 92289564 -160967019 + ERVL LTR ERVL 435 694 -5070 373 330 111 7 chr2 92289620 92289917 -160966666 + ERVL LTR ERVL 863 1190 -4574 478 355 35 5 chr2 92290172 92290369 -160966214 + ERVL LTR ERVL 1500 1702 -4062 1929 118 7 31 chr2 92290369 92290687 -160965896 + AluJb SINE Alu 1 311 0 1313 264 122 4 chr2 92290752 92291203 -160965380 + LTR50 LTR ERVL 292 795 0 3806 304 40 6 chr2 92291438 92292634 -160963949 + ERVL LTR ERVL 1948 3184 -2580 266 268 73 12 chr2 92292656 92292738 -160963845 + ERVL LTR ERVL 3587 3673 -2091 2050 286 65 27 chr2 92292795 92292944 -160963639 + ERVL LTR ERVL 4720 4862 -902 2352 113 0 0 chr2 92292944 92293253 -160963330 - AluSq SINE Alu -4 309 1 2050 286 65 27 chr2 92293253 92293531 -160963052 + ERVL LTR ERVL 4862 5128 -636 1878 143 22 53 chr2 92293531 92293717 -160962866 - MER7A DNA MER2_type -2694 344 175 2380 88 0 0 chr2 92293717 92294011 -160962572 + AluSc SINE Alu 1 294 -15 1878 143 22 53 chr2 92294011 92294180 -160962403 - MER7A DNA MER2_type -2863 175 2 2050 286 65 27 chr2 92294180 92294488 -160962095 + ERVL LTR ERVL 5128 5484 -280 770 172 0 0 chr2 92294493 92294651 -160961932 - FLAM_C SINE Alu 0 159 2 1016 229 104 11 chr2 92294904 92295486 -160961097 + LTR50 LTR ERVL 2 793 -2 1166 269 99 48 chr2 92295507 92295987 -160960596 + L2 LINE L2 2115 2644 -670 2042 128 14 7 chr2 92295987 92296284 -160960299 - AluSx SINE Alu -13 299 1 1166 269 99 48 chr2 92296284 92296512 -160960071 + L2 LINE L2 2644 2859 -455 2358 85 3 0 chr2 92296616 92296911 -160959672 + AluSg SINE Alu 1 296 -14 180 310 35 86 chr2 92297508 92297624 -160958959 + MER5A DNA MER1_type 59 168 -21 2296 100 0 0 chr2 92298677 92298977 -160957606 + AluSx SINE Alu 1 300 -12 225 258 0 56 chr2 92300291 92300380 -160956203 - L1MC4 LINE L1 -1343 6699 6616 1639 180 49 39 chr2 92300750 92301104 -160955479 + Tigger7 DNA MER2_type 1 2490 -1 1778 255 67 16 chr2 92301105 92301291 -160955292 - L1ME LINE L1 -2608 3472 3297 1810 161 23 20 chr2 92301291 92301596 -160954987 - AluJb SINE Alu -6 306 1 1778 255 67 16 chr2 92301596 92302040 -160954543 - L1ME LINE L1 -2783 3297 2810 952 184 52 0 chr2 92302043 92302217 -160954366 + MER20 DNA MER1_type 4 186 -33 1684 247 65 61 chr2 92302236 92302358 -160954225 - L1ME LINE L1 -3266 2814 2694 784 176 8 0 chr2 92302358 92302489 -160954094 - FLAM_C SINE Alu -1 132 1 1684 247 65 61 chr2 92302489 92303022 -160953561 - L1ME LINE L1 -3386 2694 1978 1394 219 61 25 chr2 92303022 92303383 -160953200 - MLT1A2 LTR MaLR 0 374 1 1684 247 65 61 chr2 92303383 92303573 -160953010 - L1ME LINE L1 -4102 1978 1790 1699 152 57 24 chr2 92303575 92303871 -160952712 - AluJb SINE Alu -2 310 5 1239 152 8 70 chr2 92303894 92304138 -160952445 - AluJo SINE Alu 0 312 84 1487 257 65 49 chr2 92304156 92305144 -160951439 - L1ME LINE L1 -4485 1776 738 900 284 18 54 chr2 92305144 92305369 -160951214 + LTR16C LTR ERVL 173 384 -107 2149 136 3 0 chr2 92305369 92305678 -160950905 - AluSq SINE Alu -3 310 1 900 284 18 54 chr2 92305678 92305783 -160950800 + LTR16C LTR ERVL 384 491 0 1920 135 50 0 chr2 92306101 92306383 -160950200 + AluSx SINE Alu 1 296 -16 2054 66 87 18 chr2 92306622 92306908 -160949675 - AluY SINE Alu -5 306 1 473 274 71 67 chr2 92308358 92308430 -160948153 + MIR SINE MIR 2 72 -190 2342 113 0 0 chr2 92308430 92308740 -160947843 - AluSx SINE Alu -2 310 1 473 274 71 67 chr2 92308740 92308922 -160947661 + MIR SINE MIR 72 257 -5 560 189 75 0 chr2 92309072 92309178 -160947405 - MER81 DNA DNA 0 114 1 846 212 0 12 chr2 92309848 92310013 -160946570 + FRAM SINE Alu 1 163 -3 397 308 176 30 chr2 92310407 92310949 -160945634 + L2 LINE L2 2689 3313 0 1627 216 192 4 chr2 92310954 92311455 -160945128 + MLT1G1 LTR MaLR 1 595 0 294 310 0 0 chr2 92311472 92311559 -160945024 - L2 LINE L2 -4 3268 3182 1061 164 127 18 chr2 92311744 92311964 -160944619 - MLT1D LTR MaLR 0 505 262 544 279 65 108 chr2 92312636 92312791 -160943792 + L1ME3A LINE L1 5410 5570 -600 6791 63 4 42 chr2 92312791 92313734 -160942849 + L1PA8 LINE L1 5265 6171 -1 544 279 65 108 chr2 92313734 92313809 -160942774 + L1ME3A LINE L1 5570 5647 -523 1850 202 80 12 chr2 92313809 92314299 -160942284 + Charlie1b DNA MER1_type 1 523 0 544 279 65 108 chr2 92314299 92314576 -160942007 + L1ME3A LINE L1 5647 5935 -235 2109 85 11 7 chr2 92314576 92314846 -160941737 + AluSg SINE Alu 1 271 -39 216 0 0 0 chr2 92314846 92314870 -160941713 + (TC)n Simple_repeat Simple_repeat 2 25 0 544 279 65 108 chr2 92314870 92314932 -160941651 + L1ME3A LINE L1 5933 5957 -213 2650 205 41 77 chr2 92314973 92315679 -160940904 + L1ME1 LINE L1 5454 6134 -32 37 39 0 0 chr2 92315679 92315730 -160940853 + AT_rich Low_complexity Low_complexity 1 51 0 * 3594 176 21 5 chr2 92315706 92316360 -160940223 - L1MC3 LINE L1 0 7785 7121 1400 120 0 5 chr2 92316360 92316552 -160940031 + AluSg SINE Alu 62 252 -58 6547 193 51 25 chr2 92316556 92318015 -160938568 - L1MC3 LINE L1 -669 7116 5620 825 150 24 0 chr2 92318387 92318514 -160938069 + FLAM_C SINE Alu 4 133 0 3118 172 32 32 chr2 92318627 92319206 -160937377 - L1MB1 LINE L1 -235 5933 5174 1947 126 10 29 chr2 92319206 92319515 -160937068 - AluJb SINE Alu -4 308 6 3118 172 32 32 chr2 92319515 92319690 -160936893 - L1MB1 LINE L1 -994 5174 5000 312 280 0 67 chr2 92319676 92319826 -160936757 - HAL1 LINE L1 -943 1564 1425 * 4352 181 28 34 chr2 92320152 92320644 -160935939 - L1MB7 LINE L1 0 6184 5701 879 226 12 0 chr2 92320644 92320812 -160935771 - FAM SINE Alu -2 173 4 4352 181 28 34 chr2 92320812 92321284 -160935299 - L1MB7 LINE L1 -483 5701 5227 378 269 197 21 chr2 92321369 92321562 -160935021 + MIR SINE MIR 24 250 -12 423 238 14 56 chr2 92321678 92321821 -160934762 + MIR3 SINE MIR 21 157 -51 261 0 0 0 chr2 92321823 92321852 -160934731 + (CA)n Simple_repeat Simple_repeat 2 30 0 2237 118 0 0 chr2 92321921 92322218 -160934365 - AluSx SINE Alu -15 297 1 603 202 0 0 chr2 92322244 92322348 -160934235 - U13 snRNA snRNA 0 104 1 331 296 35 26 chr2 92322385 92322500 -160934083 + MIR SINE MIR 20 135 -73 2684 3 0 10 chr2 92322851 92323143 -160933440 + AluYa5 SINE Alu 12 300 -11 213 254 39 100 chr2 92323208 92323338 -160933245 - L2 LINE L2 -451 2863 2742 188 111 28 0 chr2 92323368 92323404 -160933179 + (TTCA)n Simple_repeat Simple_repeat 3 39 0 286 326 43 0 chr2 92323427 92323519 -160933064 - L2 LINE L2 -40 3232 3137 297 308 125 29 chr2 92323585 92323825 -160932758 - L2 LINE L2 -661 2653 2391 21 0 0 0 chr2 92323934 92323955 -160932628 + AT_rich Low_complexity Low_complexity 1 21 0 783 152 98 6 chr2 92324423 92324587 -160931996 + L1M4 LINE L1 5296 5474 -704 234 0 0 0 chr2 92324587 92324613 -160931970 + (CAGA)n Simple_repeat Simple_repeat 1 26 0 1022 166 0 0 chr2 92324645 92324796 -160931787 - FRAM SINE Alu -15 161 11 265 322 52 43 chr2 92324891 92325102 -160931481 + L1ME LINE L1 5359 5571 -595 498 114 0 0 chr2 92325479 92325567 -160931016 + (TGGA)n Simple_repeat Simple_repeat 2 89 0 1017 257 132 45 chr2 92325847 92326553 -160930030 - L2 LINE L2 -15 3298 2536 14532 114 32 75 chr2 92326773 92326966 -160929617 - Tigger1 DNA MER2_type 0 2418 2218 2316 88 0 0 chr2 92326966 92327260 -160929323 + AluSg SINE Alu 1 294 -16 14532 114 32 75 chr2 92327260 92327523 -160929060 - Tigger1 DNA MER2_type -200 2218 1945 1779 167 0 27 chr2 92327523 92327823 -160928760 - AluJb SINE Alu -8 304 13 14532 114 32 75 chr2 92327823 92328084 -160928499 - Tigger1 DNA MER2_type -473 1945 1674 2910 0 0 3 chr2 92328084 92328396 -160928187 + AluYa5 SINE Alu 1 311 0 14532 114 32 75 chr2 92328396 92330200 -160926383 - Tigger1 DNA MER2_type -744 1674 2 865 182 0 0 chr2 92330301 92330433 -160926150 - FLAM_C SINE Alu -1 132 1 2132 109 7 23 chr2 92330481 92330784 -160925799 - AluSg SINE Alu -12 298 1 474 186 0 136 chr2 92330852 92331029 -160925554 - L1MC5 LINE L1 -44 7917 7765 1246 247 112 15 chr2 92331029 92331408 -160925175 - L2 LINE L2 -771 2543 2111 2580 159 51 26 chr2 92331408 92331899 -160924684 + MLT1D LTR MaLR 1 503 -2 1246 247 112 15 chr2 92331899 92331976 -160924607 - L2 LINE L2 -1203 2111 2043 710 215 14 35 chr2 92331985 92332129 -160924454 + FRAM SINE Alu 6 146 -30 212 273 174 0 chr2 92332164 92332285 -160924298 - L2 LINE L2 -1258 2056 1915 386 232 123 0 chr2 92332419 92332557 -160924026 - L2 LINE L2 -1612 1702 1548 601 153 0 0 chr2 92332618 92332703 -160923880 - FRAM SINE Alu -82 94 10 431 294 214 8 chr2 92332722 92332974 -160923609 - L2 LINE L2 -1771 1543 1240 324 144 10 96 chr2 92334039 92334143 -160922440 - MER106A DNA MER1_type 0 236 142 255 293 144 39 chr2 92334651 92334985 -160921598 - L1ME4a LINE L1 0 6121 5753 195 129 0 0 chr2 92335005 92335036 -160921547 + (TA)n Simple_repeat Simple_repeat 1 31 0 259 130 0 0 chr2 92335040 92335086 -160921497 - LTR66 LTR ERVL -171 439 394 189 0 0 0 chr2 92335086 92335107 -160921476 + (CA)n Simple_repeat Simple_repeat 2 22 0 1397 142 5 14 chr2 92335111 92335323 -160921260 - AluSg/x SINE Alu -19 291 82 727 197 57 0 chr2 92335361 92335554 -160921029 - L1ME LINE L1 -2901 3179 2976 469 209 16 16 chr2 92335555 92335684 -160920899 - L1ME LINE L1 -3154 2926 2798 * 957 192 9 55 chr2 92335683 92335772 -160920811 + L1PA16 LINE L1 5951 6043 -123 2563 60 0 0 chr2 92335772 92336072 -160920511 + AluY SINE Alu 1 300 -11 957 192 9 55 chr2 92336072 92336201 -160920382 + L1PA16 LINE L1 6043 6159 -7 2315 251 54 36 chr2 92336225 92336927 -160919656 - L1ME LINE L1 -3269 2811 2097 2175 97 0 13 chr2 92336927 92337252 -160919331 - AluSq SINE Alu 0 313 1 2315 251 54 36 chr2 92337252 92337896 -160918687 - L1ME LINE L1 -3983 2097 1466 350 97 48 0 chr2 92338088 92338150 -160918433 - AluSq SINE Alu 0 302 238 2267 131 32 133 chr2 92338151 92338685 -160917898 - LTR12 LTR ERV1 -234 480 1 1553 146 8 0 chr2 92338685 92338924 -160917659 - AluSq SINE Alu -72 241 1 1286 244 23 80 chr2 92338946 92339671 -160916912 - L1ME LINE L1 -4982 1088 526 1032 277 46 69 chr2 92339718 92340242 -160916341 - L1ME LINE L1 -5539 531 20 351 298 38 25 chr2 92340284 92340442 -160916141 - L1ME4a LINE L1 -7 6114 5955 192 289 0 0 chr2 92340616 92340668 -160915915 + L2 LINE L2 3262 3313 0 1061 255 58 41 chr2 92340715 92341058 -160915525 + MLT1I LTR MaLR 1 349 -60 619 215 146 0 chr2 92341058 92341202 -160915381 + MER58A DNA MER1_type 1 165 0 1380 174 42 0 chr2 92341204 92341445 -160915138 + AluJb SINE Alu 1 251 -61 292 206 11 11 chr2 92341454 92341546 -160915037 + GA-rich Low_complexity Low_complexity 2 93 0 289 159 55 0 chr2 92341546 92341635 -160914948 + MER58 DNA MER1_type 103 2404 -16 889 127 0 0 chr2 92341734 92341868 -160914715 - L1MA5A LINE L1 0 6297 6164 621 143 0 0 chr2 92342377 92342468 -160914115 + L1PA15 LINE L1 6069 6159 -6 2413 130 26 50 chr2 92342484 92342535 -160914048 + L1MA5 LINE L1 5888 5939 -361 2293 96 0 0 chr2 92342535 92342827 -160913756 - AluSg SINE Alu -18 292 1 2413 130 26 50 chr2 92342827 92343198 -160913385 + L1MA5 LINE L1 5939 6300 0 416 316 38 0 chr2 92343689 92343822 -160912761 + MIR3 SINE MIR 48 185 -23 392 227 100 9 chr2 92344378 92344488 -160912095 + MIR SINE MIR 28 147 -115 1919 143 21 11 chr2 92345989 92346276 -160910307 - AluJo SINE Alu -21 291 2 460 174 22 11 chr2 92347050 92347142 -160909441 + Charlie4 DNA MER1_type 1865 1957 -4 296 257 264 14 chr2 92347940 92348080 -160908503 - MER5A DNA MER1_type -6 183 9 495 229 133 21 chr2 92348137 92348293 -160908290 + MER5A DNA MER1_type 4 182 -7 201 118 59 0 chr2 92348467 92348501 -160908082 + GA-rich Low_complexity Low_complexity 4 39 0 2261 103 7 0 chr2 92348955 92349257 -160907326 + AluSq SINE Alu 1 304 -9 907 142 154 0 chr2 92349273 92349435 -160907148 + MER5A DNA MER1_type 1 187 -2 838 196 121 71 chr2 92349533 92349814 -160906769 - MER102b DNA MER1_type -32 309 15 1535 84 42 19 chr2 92349944 92350159 -160906424 - AluY SINE Alu -18 293 74 686 138 0 57 chr2 92350191 92350314 -160906269 + AluSg/x SINE Alu 191 306 -3 190 211 0 0 chr2 92350427 92350465 -160906118 - MIR SINE MIR -139 123 86 984 220 15 58 chr2 92350530 92350789 -160905794 - MIR SINE MIR 0 262 15 424 325 0 8 chr2 92351230 92351347 -160905236 + MIR SINE MIR 20 135 -73 695 213 201 0 chr2 92351348 92351512 -160905071 - MER3 DNA MER1_type 0 209 13 2514 199 28 35 chr2 92351862 92352362 -160904221 + L1MB8 LINE L1 5551 6048 -130 1919 109 80 0 chr2 92352362 92352636 -160903947 + AluSx SINE Alu 1 296 -16 2514 199 28 35 chr2 92352636 92352712 -160903871 + L1MB8 LINE L1 6048 6123 -55 256 275 25 8 chr2 92352887 92353007 -160903576 + Charlie1 DNA MER1_type 2379 2500 -261 385 250 36 43 chr2 92353010 92353150 -160903433 - L1ME4a LINE L1 -16 6105 5967 1241 191 12 20 chr2 92353703 92353955 -160902628 + MER46C DNA MER2_type 2 251 -87 3170 101 18 18 chr2 92353955 92354399 -160902184 + MLT2A1 LTR ERVL 1 444 0 1128 168 0 0 chr2 92354415 92354588 -160901995 - FRAM SINE Alu -11 165 1 2292 94 7 0 chr2 92354620 92354918 -160901665 + AluSq SINE Alu 1 300 -13 21 0 0 0 chr2 92354924 92354945 -160901638 + AT_rich Low_complexity Low_complexity 1 21 0 3686 229 57 44 chr2 92355105 92355886 -160900697 + L1MD3 LINE L1 4154 4923 -1436 1616 148 24 84 chr2 92355886 92356032 -160900551 + AluJb SINE Alu 1 154 -158 1892 122 65 0 chr2 92356032 92356311 -160900272 + AluSx SINE Alu 5 301 -11 1616 148 24 84 chr2 92356311 92356496 -160900087 + AluJb SINE Alu 154 312 0 3686 229 57 44 chr2 92356496 92357031 -160899552 + L1MD3 LINE L1 4923 5486 -873 2260 85 0 0 chr2 92357031 92357427 -160899156 + AluY SINE Alu 1 396 0 3686 229 57 44 chr2 92357427 92357624 -160898959 + L1MD3 LINE L1 5486 5679 -680 720 217 83 33 chr2 92357627 92357713 -160898870 + L1MD3 LINE L1 5815 5895 -2100 2170 116 0 0 chr2 92357713 92358027 -160898556 + AluSx SINE Alu 1 314 0 720 217 83 33 chr2 92358027 92358162 -160898421 + L1MD3 LINE L1 5895 6022 -1973 396 0 0 0 chr2 92358162 92358206 -160898377 + (CA)n Simple_repeat Simple_repeat 2 45 0 720 217 83 33 chr2 92358206 92358427 -160898156 + L1MD3 LINE L1 6022 7995 0 1990 114 7 23 chr2 92358660 92358966 -160897617 + AluSq SINE Alu 1 301 -12 1135 212 21 77 chr2 92359374 92359514 -160897069 + ERVL LTR ERVL 4385 4531 -1233 2046 143 0 6 chr2 92359514 92359828 -160896755 - AluSx SINE Alu 0 312 1 1135 212 21 77 chr2 92359828 92360027 -160896556 + ERVL LTR ERVL 4531 4705 -1059 3092 78 66 16 chr2 92360066 92360491 -160896092 + MLT2A2 LTR ERVL 1 446 -7 625 100 0 25 chr2 92360491 92360724 -160895859 + AluSx SINE Alu 1 312 0 207 0 0 0 chr2 92361352 92361375 -160895208 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 1727 138 36 7 chr2 92361375 92361650 -160894933 - AluJb SINE Alu -29 283 1 707 226 0 29 chr2 92361817 92361954 -160894629 + AluJb SINE Alu 136 268 -44 204 214 107 0 chr2 92362183 92362239 -160894344 - MIR SINE MIR -65 197 136 1996 142 10 0 chr2 92362245 92362540 -160894043 - AluSx SINE Alu -14 298 1 928 161 0 0 chr2 92362760 92362903 -160893680 + FLAM_C SINE Alu 1 143 0 2196 103 0 17 chr2 92362942 92363243 -160893340 + AluSx SINE Alu 1 296 -16 690 292 58 22 chr2 92363596 92363822 -160892761 + MIR SINE MIR 28 261 -1 289 222 12 62 chr2 92364039 92364120 -160892463 - L1MD3 LINE L1 -42 7953 7877 282 73 0 0 chr2 92364121 92364162 -160892421 + (TA)n Simple_repeat Simple_repeat 1 41 0 2280 98 0 0 chr2 92364168 92364455 -160892128 - AluSq SINE Alu -26 287 1 208 259 35 0 chr2 92364480 92364538 -160892045 - MIR SINE MIR -66 142 83 1321 167 27 92 chr2 92364652 92364869 -160891714 - L1MA9 LINE L1 -11 6301 6112 2334 68 10 3 chr2 92364869 92365163 -160891420 + AluY SINE Alu 1 296 -15 1321 167 27 92 chr2 92365163 92365280 -160891303 - L1MA9 LINE L1 -200 6112 5989 210 71 0 0 chr2 92366375 92366403 -160890180 + (TAAAA)n Simple_repeat Simple_repeat 1 28 0 221 128 43 0 chr2 92366404 92366451 -160890132 + (TA)n Simple_repeat Simple_repeat 2 50 0 * 344 189 72 66 chr2 92366450 92366572 -160890011 - AluJo SINE Alu -131 171 96 594 220 28 71 chr2 92366686 92366725 -160889858 - MER58B DNA MER1_type -2089 331 292 2058 127 7 0 chr2 92366725 92367033 -160889550 - AluSq SINE Alu -3 310 1 594 220 28 71 chr2 92367033 92367175 -160889408 - MER58B DNA MER1_type -2128 292 158 1454 223 127 32 chr2 92367284 92367787 -160888796 + L1ME1 LINE L1 4562 5112 -1034 1900 121 43 0 chr2 92367802 92368084 -160888499 - AluSx SINE Alu -18 294 1 * 1945 144 3 0 chr2 92368084 92368375 -160888208 - AluJo SINE Alu -20 292 1 391 246 27 0 chr2 92368375 92368476 -160888107 + L1ME1 LINE L1 6334 6149 -17 1896 115 10 24 chr2 92368487 92368783 -160887800 - AluSq SINE Alu -21 292 1 330 284 80 65 chr2 92369180 92369329 -160887254 + MIR3 SINE MIR 4 158 -50 2229 114 0 0 chr2 92369329 92369637 -160886946 + AluSx SINE Alu 1 308 -4 330 284 80 65 chr2 92369637 92369688 -160886895 + MIR3 SINE MIR 158 207 -1 233 277 0 15 chr2 92369797 92369862 -160886721 - MIR SINE MIR -114 148 85 2012 183 145 2 chr2 92370114 92370556 -160886027 + MLT1D LTR MaLR 1 505 0 1495 192 36 39 chr2 92372012 92372204 -160884379 - L1MB8 LINE L1 -114 6064 5872 2228 78 0 3 chr2 92372204 92372500 -160884083 - AluY SINE Alu -16 295 1 1495 192 36 39 chr2 92372500 92372641 -160883942 - L1MB8 LINE L1 -306 5872 5732 1694 172 7 0 chr2 92372644 92372947 -160883636 + AluJo SINE Alu 1 305 -7 1615 178 13 0 chr2 92373086 92373389 -160883194 - AluJb SINE Alu -5 307 1 2819 226 45 39 chr2 92373464 92373773 -160882810 + L1ME1 LINE L1 5392 5697 -469 1782 151 39 47 chr2 92373773 92373981 -160882602 - MER46B DNA MER2_type -2495 236 156 2163 117 0 0 chr2 92373981 92374281 -160882302 + AluSx SINE Alu 1 300 -12 1782 151 39 47 chr2 92374281 92374436 -160882147 - MER46B DNA MER2_type -2575 156 1 2819 226 45 39 chr2 92374436 92374895 -160881688 + L1ME1 LINE L1 5697 6165 -1 1982 94 11 0 chr2 92374921 92375186 -160881397 + AluSx SINE Alu 35 302 -10 255 136 15 30 chr2 92375189 92375255 -160881328 + GA-rich Low_complexity Low_complexity 1 65 0 2162 111 44 6 chr2 92375352 92375696 -160880887 + L1PA16 LINE L1 5808 6164 -2 1942 120 7 7 chr2 92375696 92375988 -160880595 - AluJb SINE Alu -20 292 1 22 88 0 0 chr2 92376011 92376068 -160880515 + AT_rich Low_complexity Low_complexity 1 57 0 189 209 67 124 chr2 92376135 92376240 -160880343 - L3 LINE CR1 -237 1340 1242 2103 102 0 0 chr2 92376465 92376782 -160879801 + AluSx SINE Alu 1 317 0 2403 113 31 6 chr2 92377408 92377763 -160878820 - THE1B LTR MaLR 0 364 1 2034 134 0 7 chr2 92378238 92378544 -160878039 - AluSx SINE Alu -8 304 1 1597 208 0 0 chr2 92378657 92378960 -160877623 + AluJo SINE Alu 1 303 -9 2025 98 28 3 chr2 92379032 92379319 -160877264 - AluSg SINE Alu -10 300 7 2095 104 0 0 chr2 92380355 92380713 -160875870 - AluSg SINE Alu 0 358 1 2388 81 0 0 chr2 92380968 92381277 -160875306 + AluSc SINE Alu 1 309 0 2045 128 3 0 chr2 92382267 92382564 -160874019 + AluSx SINE Alu 1 298 -14 336 208 0 0 chr2 92383281 92383387 -160873196 + (AGTAG)n Simple_repeat Simple_repeat 2 107 0 837 191 3 0 chr2 92383400 92383716 -160872867 + (AGTAG)n Simple_repeat Simple_repeat 1 317 0 1659 116 8 22 chr2 92383820 92384087 -160872496 + AluSq SINE Alu 44 306 -7 2014 138 0 13 chr2 92384095 92384400 -160872183 + AluSx SINE Alu 1 301 -11 26 23 0 23 chr2 92384960 92384981 -160871602 + AT_rich Low_complexity Low_complexity 1 21 -22 1737 116 32 18 chr2 92384981 92385265 -160871318 + AluSx SINE Alu 1 288 -24 26 23 0 23 chr2 92385265 92385287 -160871296 + AT_rich Low_complexity Low_complexity 21 43 0 1957 108 10 19 chr2 92385821 92386128 -160870455 - AluSx SINE Alu -5 307 4 1510 97 0 0 chr2 92386143 92386350 -160870233 - AluSg/x SINE Alu -24 288 82 468 0 0 0 chr2 92386725 92386777 -160869806 + (CA)n Simple_repeat Simple_repeat 2 53 0 23 54 0 0 chr2 92387089 92387126 -160869457 + AT_rich Low_complexity Low_complexity 1 37 0 2116 92 17 3 chr2 92387134 92387426 -160869157 + AluSx SINE Alu 1 296 -16 236 247 21 10 chr2 92389157 92389254 -160867329 + (CCG)n Simple_repeat Simple_repeat 2 99 0 192 40 0 0 chr2 92389300 92389325 -160867258 + (CCG)n Simple_repeat Simple_repeat 3 27 0 37 0 0 0 chr2 92389338 92389375 -160867208 + GC_rich Low_complexity Low_complexity 1 37 0 180 27 81 0 chr2 92389436 92389473 -160867110 + (CCGCG)n Simple_repeat Simple_repeat 1 40 0 929 164 63 4 chr2 92390721 92390928 -160865655 - MER33 DNA MER1_type -250 74 1 1640 145 38 7 chr2 92391194 92391484 -160865099 - AluJb SINE Alu -12 300 2 832 200 0 6 chr2 92391500 92391670 -160864913 + AluJb SINE Alu 134 302 -10 475 296 85 6 chr2 92391690 92391866 -160864717 + MIR SINE MIR 29 218 -44 345 234 178 9 chr2 92392287 92392394 -160864189 - MIR SINE MIR -24 238 114 260 122 0 20 chr2 92392395 92392444 -160864139 - FLAM_A SINE Alu 0 133 86 407 215 221 34 chr2 92393433 92393582 -160863001 - MER5A DNA MER1_type -4 185 9 337 207 0 0 chr2 92393692 92393750 -160862833 + L2 LINE L2 3151 3208 -64 1980 93 52 3 chr2 92393922 92394212 -160862371 - AluSx SINE Alu -8 304 1 265 196 0 0 chr2 92394216 92394267 -160862316 - Charlie8 DNA MER1_type -2253 164 114 524 256 30 8 chr2 92394425 92394558 -160862025 - MIR SINE MIR -30 232 97 189 274 0 20 chr2 92394534 92394585 -160861998 + L2 LINE L2 3200 3249 -64 * 368 266 43 0 chr2 92394634 92394728 -160861855 - MIR SINE MIR -162 100 3 593 199 29 64 chr2 92395029 92395240 -160861343 - AluYa5 SINE Alu 0 323 119 79 21 0 0 chr2 92395241 92395334 -160861249 + AT_rich Low_complexity Low_complexity 1 93 0 1516 137 0 9 chr2 92395357 92395590 -160860993 - AluJo SINE Alu -81 231 1 771 175 8 0 chr2 92395619 92395739 -160860844 + FLAM_C SINE Alu 3 123 -20 21 57 0 0 chr2 92395804 92395839 -160860744 + AT_rich Low_complexity Low_complexity 1 35 0 1838 147 3 3 chr2 92395952 92396244 -160860339 + AluJb SINE Alu 1 292 -20 1784 120 33 27 chr2 92397009 92397309 -160859274 - AluSx SINE Alu -10 302 1 486 178 44 11 chr2 92397511 92397601 -160858982 - MER20 DNA MER1_type 0 219 127 592 261 19 97 chr2 92398325 92398593 -160857990 - MIR SINE MIR 0 262 16 459 290 7 21 chr2 92398603 92398748 -160857835 - MIR3 SINE MIR -60 148 6 233 318 58 69 chr2 92398956 92399129 -160857454 - L2 LINE L2 -18 3254 3084 311 297 25 25 chr2 92399760 92399878 -160856705 + MIR SINE MIR 70 187 -75 270 298 166 55 chr2 92400140 92400617 -160855966 + L2 LINE L2 2431 2960 -354 829 147 7 29 chr2 92400655 92400791 -160855792 - FLAM_C SINE Alu 0 133 1 1991 132 0 0 chr2 92401052 92401340 -160855243 - AluSx SINE Alu -24 288 1 189 107 0 0 chr2 92402618 92402646 -160853937 + (AATAG)n Simple_repeat Simple_repeat 3 30 0 202 196 0 0 chr2 92402662 92402698 -160853885 + T-rich Low_complexity Low_complexity 1 39 -7 2111 117 0 0 chr2 92402698 92402988 -160853595 + AluSc SINE Alu 1 290 -19 2196 105 0 6 chr2 92403010 92403324 -160853259 + AluSx SINE Alu 1 312 0 490 177 71 62 chr2 92403334 92403447 -160853136 - FLAM_C SINE Alu -27 116 3 2117 125 3 6 chr2 92403478 92403790 -160852793 + AluSx SINE Alu 1 311 -1 1680 157 0 29 chr2 92403822 92404134 -160852449 + AluJb SINE Alu 7 309 -3 367 296 50 45 chr2 92404201 92404421 -160852162 - L2 LINE L2 -672 2642 2422 201 266 0 63 chr2 92404514 92404593 -160851990 - L2 LINE L2 -1041 2273 2200 * 740 297 138 52 chr2 92404583 92405424 -160851159 - L2 LINE L2 0 3313 2228 1070 213 76 19 chr2 92405430 92405730 -160850853 + L1MCa LINE L1 141 422 -5623 2275 77 3 0 chr2 92405730 92406027 -160850556 + AluSp SINE Alu 16 313 0 1070 213 76 19 chr2 92406027 92406244 -160850339 + L1MCa LINE L1 422 786 -5259 2007 123 23 19 chr2 92406245 92406688 -160849895 + AluSx SINE Alu 1 444 0 377 172 43 11 chr2 92406691 92406784 -160849799 + L1MCa LINE L1 770 865 -5180 2221 157 17 8 chr2 92406786 92407188 -160849395 + L1MCa LINE L1 789 1194 -4851 207 299 0 35 chr2 92407196 92407267 -160849316 + GA-rich Low_complexity Low_complexity 2 71 -14 1967 99 0 48 chr2 92407267 92407580 -160849003 + AluSc SINE Alu 1 298 -11 207 299 0 35 chr2 92407580 92407595 -160848988 + GA-rich Low_complexity Low_complexity 71 85 0 1223 144 13 87 chr2 92407595 92407684 -160848899 + L1MCa LINE L1 1205 1299 -5265 2167 89 7 0 chr2 92407684 92407976 -160848607 + AluSg SINE Alu 1 294 -16 1223 144 13 87 chr2 92407976 92408184 -160848399 + L1MCa LINE L1 1299 1480 -5084 2027 140 0 0 chr2 92408230 92408559 -160848024 - AluSx SINE Alu 0 312 1 1725 130 65 0 chr2 92408571 92408848 -160847735 - AluSq SINE Alu -18 295 1 1061 154 0 6 chr2 92408858 92409027 -160847556 - AluJb SINE Alu -23 289 122 1895 113 3 24 chr2 92409060 92409375 -160847208 - AluSx SINE Alu 0 309 1 1672 131 21 21 chr2 92409375 92409657 -160846926 - AluJb SINE Alu -29 283 1 326 307 88 7 chr2 92409806 92409943 -160846640 + HAL1 LINE L1 2 149 -2358 * 398 321 137 37 chr2 92409924 92410195 -160846388 + L1MC4a LINE L1 5873 6170 -1638 2039 113 0 0 chr2 92410206 92410521 -160846062 + AluSx SINE Alu 1 315 0 393 77 0 0 chr2 92410655 92410711 -160845872 - Alu SINE Alu -260 48 2 2030 113 7 3 chr2 92410954 92411263 -160845320 - AluSq SINE Alu -3 310 1 401 278 157 31 chr2 92411453 92411676 -160844907 - L2 LINE L2 -339 2975 2725 1095 36 0 22 chr2 92411682 92411820 -160844763 + AluSc SINE Alu 1 135 -174 2513 51 0 6 chr2 92411820 92412133 -160844450 + AluY SINE Alu 1 311 0 1613 115 91 0 chr2 92412134 92412387 -160844196 + AluSg SINE Alu 1 276 -34 279 0 0 0 chr2 92412393 92412424 -160844159 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 384 278 69 74 chr2 92412430 92412612 -160843971 - L2 LINE L2 -586 2728 2545 1947 111 7 4 chr2 92412612 92412918 -160843665 - AluSq SINE Alu 0 310 4 384 278 69 74 chr2 92412918 92412950 -160843633 - L2 LINE L2 -769 2545 2514 1923 122 4 0 chr2 92413144 92413469 -160843114 - AluSg SINE Alu 0 326 1 469 281 106 37 chr2 92413689 92413785 -160842798 - L2 LINE L2 -796 2518 2430 1402 171 34 27 chr2 92413785 92414078 -160842505 + AluJo SINE Alu 1 295 -17 469 281 106 37 chr2 92414078 92414295 -160842288 - L2 LINE L2 -884 2430 38 1694 159 21 7 chr2 92414408 92414697 -160841886 - AluSx SINE Alu -19 293 1 2186 99 3 0 chr2 92414781 92415084 -160841499 - AluSc SINE Alu -5 304 1 696 194 8 15 chr2 92415101 92415235 -160841348 - FLAM_C SINE Alu 0 133 1 2462 60 0 0 chr2 92415274 92415574 -160841009 - AluY SINE Alu -11 300 1 851 267 100 51 chr2 92415575 92416549 -160840034 - L1MEd LINE L1 -4596 1533 576 2384 198 92 59 chr2 92416811 92417118 -160839465 - L1MC4 LINE L1 -2 8040 7745 1687 129 36 53 chr2 92417118 92417420 -160839163 - AluJb SINE Alu -11 301 5 2384 198 92 59 chr2 92417420 92417778 -160838805 - L1MC4 LINE L1 -297 7745 7353 1109 257 27 14 chr2 92417780 92418072 -160838511 + MLT1A2 LTR MaLR 3 298 -76 2044 109 26 26 chr2 92418073 92418384 -160838199 + AluSx SINE Alu 1 311 -1 241 314 12 12 chr2 92418442 92418528 -160838055 + CT-rich Low_complexity Low_complexity 3 88 0 320 318 9 9 chr2 92418914 92419021 -160837562 - ERVL LTR ERVL -1131 4633 4527 2342 100 0 6 chr2 92419021 92419332 -160837251 - AluSg SINE Alu -1 309 1 1728 147 13 17 chr2 92419663 92419962 -160836621 + AluSx SINE Alu 1 298 -14 396 363 60 8 chr2 92419967 92420201 -160836382 - ERVL LTR ERVL -2357 3297 3052 1513 96 39 82 chr2 92420241 92420334 -160836249 - Tigger7 DNA MER2_type 0 2491 2396 2331 107 7 0 chr2 92420334 92420644 -160835939 - AluSx SINE Alu 0 312 1 1513 96 39 82 chr2 92420644 92420831 -160835752 - Tigger7 DNA MER2_type -95 2396 2223 2074 126 0 3 chr2 92420832 92421125 -160835458 - AluSx SINE Alu -15 297 6 430 245 40 40 chr2 92421157 92421228 -160835355 - AluJo/FRAM SINE Alu -13 299 229 2164 134 0 10 chr2 92421228 92421541 -160835042 - AluSx SINE Alu -2 310 1 430 245 40 40 chr2 92421541 92421620 -160834963 - AluJo/FRAM SINE Alu -82 230 149 426 222 37 0 chr2 92421632 92421713 -160834870 - Tigger7 DNA MER2_type -255 84 1 766 346 71 33 chr2 92421721 92422351 -160834232 - ERVL LTR ERVL -2678 3015 2323 2069 96 0 41 chr2 92422446 92422790 -160833793 + AluSx SINE Alu 1 332 0 189 0 0 0 chr2 92423033 92423054 -160833529 + (A)n Simple_repeat Simple_repeat 1 21 0 2235 232 31 29 chr2 92423102 92423186 -160833397 + LTR40a LTR ERVL 1 83 -436 2333 104 0 7 chr2 92423186 92423493 -160833090 - AluSq SINE Alu -8 305 1 2235 232 31 29 chr2 92423493 92423920 -160832663 + LTR40a LTR ERVL 83 513 -6 317 316 76 6 chr2 92423931 92424102 -160832481 + L1M4 LINE L1 3743 3925 -2221 1917 117 35 48 chr2 92424169 92424459 -160832124 - AluSx SINE Alu -26 286 1 2273 126 0 0 chr2 92426237 92426539 -160830044 + AluSx SINE Alu 1 302 -10 638 226 68 0 chr2 92426679 92426825 -160829758 + MER58 DNA MER1_type 1 156 -185 733 128 0 0 chr2 92426827 92426929 -160829654 + U6 snRNA snRNA 1 102 -5 2202 125 0 7 chr2 92426929 92427226 -160829357 - AluSx SINE Alu -17 295 1 563 163 0 22 chr2 92477508 92477600 -160778983 - AluJ/FLAM SINE Alu -220 92 3 845 179 17 28 chr2 92477601 92477780 -160778803 + MER31A LTR ERV1 309 485 0 196 111 48 111 chr2 92478541 92478604 -160777979 - L2 LINE L2 -110 3203 3145 1858 158 3 7 chr2 92478604 92478916 -160777667 + AluJb SINE Alu 1 311 0 245 71 24 0 chr2 92479303 92479345 -160777238 - L1M4 LINE L1 -1140 5006 4964 778 238 18 36 chr2 92479362 92479552 -160777031 - AluJb SINE Alu 0 306 120 1106 191 98 12 chr2 92479587 92479843 -160776740 + MLT1D LTR MaLR 31 308 -197 26 0 0 0 chr2 92480007 92480033 -160776550 + AT_rich Low_complexity Low_complexity 1 26 0 1741 152 0 45 chr2 92480038 92480327 -160776256 - AluSx SINE Alu -30 282 7 183 100 0 0 chr2 92480366 92480396 -160776187 + (TCCA)n Simple_repeat Simple_repeat 1 30 0 260 241 81 11 chr2 92480405 92480492 -160776091 - L2 LINE L2 -33 3280 3188 338 359 93 35 chr2 92480637 92480982 -160775601 - L2 LINE L2 -343 2971 2607 2469 81 0 10 chr2 92480989 92481296 -160775287 + AluSx SINE Alu 1 304 -8 1868 244 94 36 chr2 92481815 92482566 -160774017 + L1MC4 LINE L1 7115 7909 -133 186 167 0 0 chr2 92483534 92483570 -160773013 + (CCAA)n Simple_repeat Simple_repeat 2 37 0 2269 105 0 10 chr2 92484062 92484367 -160772216 + AluSx SINE Alu 1 302 -10 287 227 45 0 chr2 92485257 92485323 -160771260 + L2 LINE L2 3244 3312 -1 2269 94 10 3 chr2 92486288 92486586 -160769997 - AluSx SINE Alu -12 300 1 575 234 49 38 chr2 92487175 92487359 -160769224 + MER5A DNA MER1_type 1 186 -3 22 0 0 0 chr2 92487712 92487734 -160768849 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr2 92487805 92487840 -160768743 + AT_rich Low_complexity Low_complexity 1 35 0 423 38 0 0 chr2 92488337 92488390 -160768193 + (TG)n Simple_repeat Simple_repeat 2 54 0 439 258 174 0 chr2 92488493 92488625 -160767958 + MER5A DNA MER1_type 29 183 -6 2399 72 7 3 chr2 92489498 92489802 -160766781 + AluSq SINE Alu 1 305 -8 1077 137 44 105 chr2 92491736 92492068 -160764515 - LTR23 LTR ERV1 -111 334 6 3803 131 51 14 chr2 92492230 92492858 -160763725 - MER39B LTR ERV1 -2 651 1 4080 151 36 8 chr2 92493444 92494147 -160762436 + MER50 LTR ERV1 1 722 -12 3310 146 28 11 chr2 92494147 92494682 -160761901 + MER50-int LTR ERV1 7 550 -6655 1749 157 10 14 chr2 92495053 92495347 -160761236 - AluJo SINE Alu -19 293 1 682 259 192 13 chr2 92495392 92495709 -160760874 + L2 LINE L2 1648 2021 -1293 663 284 141 45 chr2 92495725 92495928 -160760655 + L2 LINE L2 2730 2912 -401 1784 163 115 20 chr2 92495928 92496284 -160760299 - MLT1B LTR MaLR 0 390 1 663 284 141 45 chr2 92496284 92496597 -160759986 + L2 LINE L2 2912 3300 -13 225 0 0 0 chr2 92496597 92496622 -160759961 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 344 253 105 43 chr2 92497148 92497310 -160759273 - L2 LINE L2 -62 3251 3080 378 222 0 0 chr2 92498093 92498105 -160758478 - L1MA10 LINE L1 -6 6328 6317 3247 200 42 25 chr2 92498105 92498841 -160757742 - L1ME2 LINE L1 -10 6154 5406 5983 179 77 25 chr2 92498947 92500201 -160756382 + MER50-int LTR ERV1 533 1850 -5355 4517 171 11 20 chr2 92500197 92501679 -160754904 + MER50-int LTR ERV1 2788 4185 -804 * 866 150 12 0 chr2 92501779 92501939 -160754644 + MER50-int LTR ERV1 3260 3421 -2525 * 8644 112 25 19 chr2 92501935 92502877 -160753706 + MER50-int LTR ERV1 4926 5878 -1327 2164 126 3 7 chr2 92502877 92503186 -160753397 - AluSx SINE Alu -2 310 3 8644 112 25 19 chr2 92503186 92503531 -160753052 + MER50-int LTR ERV1 5878 6220 -985 2449 120 11 8 chr2 92503509 92503866 -160752717 + MER50-int LTR ERV1 6840 7197 -8 * 4152 162 22 11 chr2 92503866 92504583 -160752000 + MER50 LTR ERV1 1 725 -9 392 177 42 10 chr2 92504613 92504709 -160751874 - MER20 DNA MER1_type -4 215 117 4709 135 25 15 chr2 92504822 92505605 -160750978 - L1PA13 LINE L1 -4509 2278 1533 2236 85 3 19 chr2 92505605 92505921 -160750662 - AluY SINE Alu 0 311 1 494 334 31 37 chr2 92505933 92506259 -160750324 - MER110-int LTR ERV1 -2234 2413 2090 2115 114 14 7 chr2 92506909 92507206 -160749377 - AluJb SINE Alu -13 299 1 3332 141 54 30 chr2 92508122 92508718 -160747865 - MER4D LTR ERV1 -112 791 182 815 154 22 15 chr2 92508718 92508854 -160747729 + FLAM_C SINE Alu 1 137 -6 1235 126 5 11 chr2 92508854 92509044 -160747539 - MER4D LTR ERV1 -714 189 1 231 274 16 81 chr2 92509046 92509170 -160747413 - LTR34 LTR ERV1 -294 405 290 338 264 114 25 chr2 92509338 92509539 -160747044 - HAL1 LINE L1 -241 2266 2048 307 283 57 38 chr2 92509616 92509722 -160746861 - HAL1 LINE L1 -636 1871 1764 1484 127 0 9 chr2 92509723 92509944 -160746639 - AluSq SINE Alu -4 309 91 198 0 0 0 chr2 92509963 92509985 -160746598 + (TA)n Simple_repeat Simple_repeat 2 23 0 1951 86 43 21 chr2 92510115 92510395 -160746188 + AluSx SINE Alu 15 300 -12 191 254 0 79 chr2 92510820 92510883 -160745700 + MER5A DNA MER1_type 108 165 -24 1376 216 7 17 chr2 92511195 92511496 -160745087 - AluJo SINE Alu -14 298 1 2404 111 132 21 chr2 92511519 92511619 -160744964 - L1PA16 LINE L1 -4 6162 6075 1840 88 11 15 chr2 92511619 92511879 -160744704 - AluSc SINE Alu -12 297 39 2404 111 132 21 chr2 92511879 92512215 -160744368 - L1PA16 LINE L1 -91 6075 5667 2376 87 3 3 chr2 92512666 92512977 -160743606 + AluSq SINE Alu 1 311 -2 307 320 31 0 chr2 92513000 92513097 -160743486 - L2 LINE L2 -332 2981 2882 * 2970 224 140 151 chr2 92513077 92513724 -160742859 - L2 LINE L2 -945 2369 1717 1855 154 64 9 chr2 92513724 92514054 -160742529 - MLT1A1 LTR MaLR -17 348 1 2970 224 140 151 chr2 92514054 92515410 -160741173 - L2 LINE L2 -1597 1717 62 28 0 0 0 chr2 92515509 92515537 -160741046 + AT_rich Low_complexity Low_complexity 1 28 0 521 261 48 32 chr2 92515734 92515922 -160740661 + MIR SINE MIR 28 218 -44 2642 236 75 14 chr2 92516334 92516511 -160740072 + L1ME1 LINE L1 5430 5595 -571 1811 137 87 63 chr2 92516511 92516833 -160739750 + THE1C LTR MaLR 1 335 -40 2202 125 0 3 chr2 92516833 92517137 -160739446 - AluSx SINE Alu -9 303 1 1811 137 87 63 chr2 92517137 92517180 -160739403 + THE1C LTR MaLR 335 375 0 2642 236 75 14 chr2 92517180 92517692 -160738891 + L1ME1 LINE L1 5595 6161 -5 411 291 0 10 chr2 92518141 92518244 -160738339 + MER5A DNA MER1_type 85 186 -3 181 207 69 35 chr2 92518777 92518835 -160737748 + L2 LINE L2 332 391 -2923 228 300 90 63 chr2 92518979 92519202 -160737381 - MLT1H LTR MaLR -225 324 96 181 263 18 35 chr2 92519923 92519980 -160736603 + MIR SINE MIR 68 123 -85 275 298 50 50 chr2 92521510 92521768 -160734815 + L1MCc LINE L1 1279 1536 -4887 4865 133 27 10 chr2 92521811 92522622 -160733961 + L1MB7 LINE L1 5359 6183 -1 991 264 98 31 chr2 92522614 92523346 -160733237 + L1MCc LINE L1 1723 2496 -4445 * 6620 210 98 11 chr2 92523357 92524779 -160731804 + L1PA13 LINE L1 2 1547 -5240 613 129 21 0 chr2 92524779 92524872 -160731711 + AluS SINE Alu 2 96 -217 977 172 6 6 chr2 92525011 92525185 -160731398 - AluJb SINE Alu -5 307 134 1611 223 121 146 chr2 92525185 92526013 -160730570 - HAL1 LINE L1 -866 1641 793 246 32 0 0 chr2 92526013 92526044 -160730539 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2141 99 3 7 chr2 92526047 92526329 -160730254 - AluSx SINE Alu -31 281 1 1611 223 121 146 chr2 92526329 92526668 -160729915 - HAL1 LINE L1 -1716 791 445 250 140 53 53 chr2 92526668 92526725 -160729858 + MLT1H LTR MaLR 491 547 -2 1611 223 121 146 chr2 92526725 92526889 -160729694 - HAL1 LINE L1 -2062 445 278 3630 129 56 28 chr2 92526889 92527494 -160729089 - LTR26E LTR ERV1 0 622 1 1611 223 121 146 chr2 92527494 92527734 -160728849 - HAL1 LINE L1 -2229 278 50 4368 90 27 12 chr2 92527734 92528325 -160728258 + MER4A LTR ERV1 1 600 0 1611 223 121 146 chr2 92528325 92528373 -160728210 - HAL1 LINE L1 -2457 50 2 2307 139 67 40 chr2 92528629 92529071 -160727512 - MER39B LTR ERV1 -2 651 198 1880 116 161 75 chr2 92529071 92529443 -160727140 - MER4A LTR ERV1 0 664 261 522 98 195 0 chr2 92529443 92529525 -160727058 - MER4A LTR ERV1 -566 98 1 17303 97 47 19 chr2 92529532 92532217 -160724366 - MER4A-int LTR ERV1 -2 6596 3836 872 186 47 19 chr2 92532215 92532430 -160724153 - MER4A-int LTR ERV1 -2917 3681 3461 * 60 37 0 0 chr2 92532430 92532511 -160724072 + AT_rich Low_complexity Low_complexity 1 81 0 6252 51 0 3 chr2 92532514 92533234 -160723349 + L1PA7 LINE L1 5437 6154 0 315 178 76 19 chr2 92533236 92533393 -160723190 + (TATAA)n Simple_repeat Simple_repeat 4 169 0 252 0 0 0 chr2 92533399 92533427 -160723156 + (CA)n Simple_repeat Simple_repeat 2 29 0 1138 48 48 0 chr2 92533436 92533581 -160723002 + L1PA7 LINE L1 5682 5833 -321 30 89 0 0 chr2 92533581 92533660 -160722923 + AT_rich Low_complexity Low_complexity 1 79 0 2407 147 61 43 chr2 92533663 92534329 -160722254 - MER4A-int LTR ERV1 -3130 3468 1738 771 153 127 6 chr2 92534329 92534486 -160722097 + LTR8 LTR ERV1 1 176 -515 1322 223 45 19 chr2 92534495 92534804 -160721779 - MER4A-int LTR ERV1 -4170 2161 1845 2638 106 168 54 chr2 92534949 92535522 -160721061 - MER4A-int LTR ERV1 -5912 686 1 494 141 0 43 chr2 92535525 92535617 -160720966 - MER4A LTR ERV1 0 664 577 363 237 169 14 chr2 92536433 92536640 -160719943 - L1MC5 LINE L1 -31 7930 7692 508 269 89 39 chr2 92536694 92536915 -160719668 - L1MC5 LINE L1 -393 7415 7347 1071 182 108 15 chr2 92536915 92537118 -160719465 + MER58A DNA MER1_type 2 223 -1 508 269 89 39 chr2 92537118 92537227 -160719356 - L1MC5 LINE L1 -461 7347 7245 2325 99 3 6 chr2 92537348 92537660 -160718923 - AluY SINE Alu 0 311 1 1936 102 15 8 chr2 92538220 92538485 -160718098 + L1PA8 LINE L1 5904 6170 -2 193 266 53 117 chr2 92538686 92538780 -160717803 + MIR SINE MIR 48 135 -73 323 255 54 40 chr2 92539296 92539445 -160717138 + L2 LINE L2 2237 2387 -927 583 291 131 73 chr2 92539470 92540157 -160716426 + L2 LINE L2 2511 3241 -72 231 229 43 14 chr2 92540196 92540266 -160716317 - L2 LINE L2 -954 2360 2289 29 0 0 0 chr2 92541809 92541838 -160714745 + AT_rich Low_complexity Low_complexity 1 29 0 495 292 45 0 chr2 92543401 92543559 -160713024 - MIR3 SINE MIR -37 171 1 513 142 80 71 chr2 92543760 92543873 -160712710 - FLAM_A SINE Alu -19 114 1 2015 125 3 77 chr2 92544204 92544541 -160712042 - AluJb SINE Alu 0 312 1 5083 181 152 24 chr2 92544752 92545334 -160711249 + Charlie1a DNA MER1_type 2 508 -2253 1843 143 0 43 chr2 92545334 92545634 -160710949 + AluJo SINE Alu 1 287 -25 198 0 0 0 chr2 92545639 92545661 -160710922 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 5083 181 152 24 chr2 92545661 92546282 -160710301 + Charlie1a DNA MER1_type 511 1388 -1373 1793 123 24 0 chr2 92546282 92546534 -160710049 + AluJo SINE Alu 1 258 -54 5083 181 152 24 chr2 92546534 92546612 -160709971 + Charlie1a DNA MER1_type 1388 1455 0 261 289 94 61 chr2 92546661 92546840 -160709743 + MIR SINE MIR 2 186 -63 1980 124 23 7 chr2 92547131 92547430 -160709153 - AluSg SINE Alu -6 304 1 231 292 257 9 chr2 92548609 92548722 -160707861 - MIR3 SINE MIR -62 146 6 2540 105 30 28 chr2 92549836 92550199 -160706384 + THE1B LTR MaLR 1 364 0 415 115 49 0 chr2 92550503 92550564 -160706019 + U6 snRNA snRNA 1 64 -43 351 242 104 81 chr2 92550862 92550936 -160705647 + MIR SINE MIR 32 103 -159 1940 108 4 0 chr2 92550936 92551195 -160705388 - AluSg SINE Alu -16 294 35 351 242 104 81 chr2 92551195 92551238 -160705345 + MIR SINE MIR 103 144 -118 2005 126 20 7 chr2 92551238 92551531 -160705052 - AluSx SINE Alu -15 297 1 351 242 104 81 chr2 92551531 92551623 -160704960 + MIR SINE MIR 144 247 -15 355 316 101 39 chr2 92552202 92552559 -160704024 - L2 LINE L2 -15 3298 2920 212 250 0 0 chr2 92553073 92553117 -160703466 + MIR SINE MIR 117 160 -102 199 380 10 10 chr2 92555568 92555668 -160700915 + L2 LINE L2 2985 3084 -188 3665 162 44 129 chr2 92556706 92557691 -160698892 + MER21A LTR ERV1 25 925 -6 1065 205 5 5 chr2 92558434 92558644 -160697939 + AluJo SINE Alu 13 222 -90 464 177 80 18 chr2 92558726 92558839 -160697744 - LTR37A LTR ERV1 -12 414 295 833 153 8 0 chr2 92558839 92558970 -160697613 - MSTD LTR MaLR 0 396 265 683 201 36 22 chr2 92558987 92559126 -160697457 - MSTD LTR MaLR -287 141 1 286 215 13 128 chr2 92559193 92559342 -160697241 - LTR37A LTR ERV1 -233 193 62 279 173 0 0 chr2 92560208 92560260 -160696323 + T-rich Low_complexity Low_complexity 1 52 0 773 251 45 0 chr2 92561725 92561924 -160694659 + MIR SINE MIR 29 236 -26 2006 141 0 10 chr2 92562528 92562826 -160693757 + AluJb SINE Alu 1 295 -17 21 0 0 0 chr2 92563410 92563431 -160693152 + AT_rich Low_complexity Low_complexity 1 21 0 233 257 14 14 chr2 92563817 92563887 -160692696 - MER4D LTR ERV1 -42 861 792 1994 139 23 37 chr2 92564500 92564853 -160691730 - THE1B LTR MaLR 0 364 17 12222 89 23 1 chr2 92564872 92566415 -160690168 - THE1B-int LTR MaLR -2 1578 1 2270 108 27 46 chr2 92566415 92566786 -160689797 - THE1B LTR MaLR 0 364 1 8444 117 22 1 chr2 92566835 92568875 -160687708 + L1PA10 LINE L1 4094 6168 0 496 261 44 39 chr2 92570382 92570562 -160686021 - MER110-int LTR ERV1 -1726 2921 2741 17727 157 81 8 chr2 92570889 92571371 -160685212 + L1P4 LINE L1 1690 2136 -4027 2004 152 3 0 chr2 92571371 92571667 -160684916 + AluSx SINE Alu 1 297 -15 17727 157 81 8 chr2 92571667 92571703 -160684880 + L1P4 LINE L1 2136 2168 -3995 2294 116 0 3 chr2 92571703 92572014 -160684569 + AluSx SINE Alu 1 310 -2 17727 157 81 8 chr2 92572014 92574026 -160682557 + L1P4 LINE L1 2168 4578 -1585 2282 92 3 0 chr2 92574026 92574318 -160682265 - AluY SINE Alu -18 293 1 17727 157 81 8 chr2 92574318 92575415 -160681168 + L1P4 LINE L1 4578 5594 -569 431 83 0 42 chr2 92575415 92575486 -160681097 + L1PA13 LINE L1 6094 6162 -1 1723 172 0 11 chr2 92575595 92575880 -160680703 + AluSg SINE Alu 19 300 -10 770 163 0 54 chr2 92576044 92576191 -160680392 + FLAM_C SINE Alu 3 141 -2 385 234 23 102 chr2 92576193 92576349 -160680234 + L1MEc LINE L1 2084 2168 -4047 1753 160 0 27 chr2 92576349 92576642 -160679941 - AluJb SINE Alu -27 285 1 385 234 23 102 chr2 92576642 92576774 -160679809 + L1MEc LINE L1 2168 2309 -3906 2250 119 0 3 chr2 92576813 92577124 -160679459 + AluSx SINE Alu 1 310 -2 1884 142 3 17 chr2 92577187 92577489 -160679094 - AluJo SINE Alu -14 298 1 3478 145 65 20 chr2 92577521 92578006 -160678577 - L1MC1 LINE L1 0 6333 5814 1708 190 0 7 chr2 92578006 92578316 -160678267 - AluJo SINE Alu -4 308 1 3478 145 65 20 chr2 92578316 92578430 -160678153 - L1MC1 LINE L1 -519 5814 5707 882 144 0 0 chr2 92578566 92578684 -160677899 - FLAM_C SINE Alu -15 118 1 2125 113 34 0 chr2 92578794 92579087 -160677496 + AluSx SINE Alu 1 303 -9 185 167 0 0 chr2 92579098 92579128 -160677455 + L2 LINE L2 3025 3054 -218 1761 173 0 4 chr2 92579859 92580136 -160676447 + AluJb SINE Alu 12 287 -25 2253 71 3 24 chr2 92580147 92580433 -160676150 + AluY SINE Alu 1 282 -29 432 51 0 0 chr2 92580433 92580492 -160676091 + (CAAAC)n Simple_repeat Simple_repeat 1 59 0 1262 118 6 0 chr2 92580500 92580678 -160675905 + AluSg/x SINE Alu 132 310 0 713 238 17 44 chr2 92580842 92581023 -160675560 - MER5B DNA MER1_type -2 176 1 1906 145 3 3 chr2 92581380 92581662 -160674921 - AluSx SINE Alu -30 282 1 1785 233 98 65 chr2 92581781 92582044 -160674539 + L1MC5 LINE L1 6686 6939 -1022 1989 135 0 22 chr2 92582044 92582356 -160674227 - AluJb SINE Alu -6 306 2 1785 233 98 65 chr2 92582356 92582926 -160673657 + L1MC5 LINE L1 6939 7547 -414 1544 183 40 6 chr2 92582930 92583407 -160673176 + MER68 LTR ERV1 1 562 0 292 171 219 32 chr2 92583445 92583568 -160673015 + L1MC5 LINE L1 7608 7753 -208 1599 199 3 32 chr2 92583575 92583886 -160672697 + AluJb SINE Alu 1 302 -10 565 231 11 44 chr2 92583942 92584124 -160672459 + L1MC5 LINE L1 7751 7926 -35 325 282 12 0 chr2 92584133 92584218 -160672365 - L1MC4a LINE L1 -1938 5870 5785 344 263 0 88 chr2 92584718 92584855 -160671728 - LTR67 LTR ERVL 0 557 433 406 258 62 82 chr2 92584969 92585163 -160671420 - MLT1K LTR MaLR -397 191 2 199 307 34 57 chr2 92585718 92585806 -160670777 + L3b LINE CR1 1391 1476 -107 193 81 81 0 chr2 92585881 92585943 -160670640 + (TTATA)n Simple_repeat Simple_repeat 4 70 0 288 247 26 26 chr2 92586822 92586899 -160669684 + L2 LINE L2 3235 3311 -2 2170 109 7 0 chr2 92587703 92588016 -160668567 - AluSq SINE Alu 0 315 1 1897 147 54 30 chr2 92588300 92588668 -160667915 - MLT2D LTR ERVL -37 377 1 2083 145 0 3 chr2 92590039 92590343 -160666240 - AluSx SINE Alu -9 303 1 696 199 122 6 chr2 92590698 92590854 -160665729 + MER5B DNA MER1_type 2 175 -3 467 257 214 0 chr2 92590863 92591003 -160665580 - MER5A DNA MER1_type -6 183 14 2325 151 78 8 chr2 92591483 92591881 -160664702 + MSTB LTR MaLR 1 426 0 234 0 0 0 chr2 92592082 92592108 -160664475 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 2122 96 11 0 chr2 92592110 92592382 -160664201 - AluSp SINE Alu -31 282 8 2138 113 0 0 chr2 92593004 92593278 -160663305 + AluSx SINE Alu 1 274 -38 311 321 137 23 chr2 92593707 92593838 -160662745 - L2 LINE L2 0 3272 3127 1567 136 5 0 chr2 92593981 92594201 -160662382 - AluSx SINE Alu -91 221 1 210 143 0 0 chr2 92595014 92595049 -160661534 + (TCTA)n Simple_repeat Simple_repeat 2 36 0 227 229 21 0 chr2 92595658 92595706 -160660877 + MER39 LTR ERV1 4 52 -655 * 1451 238 93 18 chr2 92595704 92596146 -160660437 + MER39 LTR ERV1 233 707 0 716 286 41 49 chr2 92596246 92596675 -160659908 + L2 LINE L2 2678 3108 -205 490 238 86 0 chr2 92596898 92597003 -160659580 + MER81 DNA DNA 1 114 0 180 0 0 0 chr2 92597188 92597208 -160659375 + (CA)n Simple_repeat Simple_repeat 2 21 0 378 296 76 17 chr2 92597766 92597938 -160658645 - MIR SINE MIR -79 183 2 261 180 0 0 chr2 92598020 92598070 -160658513 - L1MD1 LINE L1 -8 6234 6185 538 171 0 0 chr2 92598493 92598575 -160658008 + FLAM_A SINE Alu 45 126 -16 259 226 0 0 chr2 92598589 92598642 -160657941 + MER20 DNA MER1_type 166 218 -1 1219 221 67 52 chr2 92598699 92598910 -160657673 + LTR37A LTR ERV1 1 207 -219 2031 136 67 28 chr2 92598910 92599271 -160657312 + THE1C LTR MaLR 1 375 0 1219 221 67 52 chr2 92599271 92599479 -160657104 + LTR37A LTR ERV1 207 426 0 378 319 17 8 chr2 92599563 92599682 -160656901 + L2 LINE L2 3194 3313 0 189 0 0 0 chr2 92599734 92599755 -160656828 + (GA)n Simple_repeat Simple_repeat 2 22 0 1692 146 90 12 chr2 92599937 92600258 -160656325 - MER65A LTR ERV1 -99 346 1 1197 123 0 0 chr2 92600332 92600494 -160656089 - AluSg/x SINE Alu -18 292 131 225 245 38 0 chr2 92601145 92601198 -160655385 - MIR3 SINE MIR -14 194 140 416 237 44 35 chr2 92601244 92601358 -160655225 - MIR3 SINE MIR -52 156 42 1198 189 108 14 chr2 92601559 92601845 -160654738 + MER31B LTR ERV1 3 315 -151 1390 129 42 8 chr2 92601845 92602086 -160654497 - AluJo SINE Alu -8 304 56 932 82 67 0 chr2 92602245 92602380 -160654203 - MER30 DNA MER1_type -86 144 1 1918 152 14 3 chr2 92602642 92602939 -160653644 - AluSx SINE Alu -12 300 1 205 200 0 0 chr2 92602974 92603009 -160653574 + (TG)n Simple_repeat Simple_repeat 2 36 0 464 282 32 45 chr2 92603074 92603230 -160653353 - MLT1F LTR MaLR -375 167 14 2256 87 81 43 chr2 92603296 92603641 -160652942 - L1PA13 LINE L1 -5 6158 5801 958 203 66 52 chr2 92603795 92604160 -160652423 - L1MC5 LINE L1 -36 7925 7556 260 317 217 31 chr2 92604194 92604355 -160652228 - MIR3 SINE MIR -6 202 12 283 253 88 11 chr2 92604704 92604795 -160651788 - L1MC4a LINE L1 -1902 5906 5809 675 263 45 5 chr2 92605704 92605902 -160650681 - MIR SINE MIR -12 250 45 588 215 99 41 chr2 92606929 92607101 -160649482 - MER106A DNA MER1_type -54 182 1 281 330 64 37 chr2 92607151 92607339 -160649244 + MIR SINE MIR 22 214 -48 228 274 282 0 chr2 92611578 92611702 -160644881 - MIR SINE MIR -24 238 80 580 232 18 30 chr2 92612113 92612281 -160644302 + MIR SINE MIR 34 199 -63 1617 183 32 0 chr2 92612468 92612747 -160643836 - AluJb SINE Alu -24 288 1 18581 148 39 15 chr2 92613908 92617800 -160638783 - L1PB1 LINE L1 -5 6862 2711 1912 108 0 8 chr2 92617800 92618059 -160638524 - AluSq SINE Alu -17 296 40 18581 148 39 15 chr2 92618059 92620840 -160635743 - L1PB1 LINE L1 -4156 2711 1 354 286 69 33 chr2 92621033 92621365 -160635218 - L1MC4a LINE L1 -1877 5931 5506 1298 219 84 36 chr2 92621452 92621543 -160635040 - L1ME3A LINE L1 -327 5843 5758 1652 143 6 73 chr2 92621543 92621872 -160634711 - AluJo SINE Alu -5 307 1 1298 219 84 36 chr2 92621872 92622383 -160634200 - L1ME3A LINE L1 -412 5758 5207 468 250 96 36 chr2 92622433 92622664 -160633919 - L2 LINE L2 -205 3067 2832 22 70 0 0 chr2 92623632 92623675 -160632908 + AT_rich Low_complexity Low_complexity 1 43 0 220 258 118 21 chr2 92625505 92625598 -160630985 - MIR SINE MIR -64 144 43 244 247 275 6 chr2 92625872 92626050 -160630533 - MIR SINE MIR -18 244 19 2286 195 155 9 chr2 92626451 92626985 -160629598 - MER90 LTR ERV1 0 614 3 1136 206 119 0 chr2 92628060 92628346 -160628237 - MER33 DNA MER1_type 0 324 5 370 288 155 27 chr2 92628654 92628873 -160627710 + L2 LINE L2 3009 3255 -17 431 238 66 33 chr2 92630567 92630748 -160625835 + LTR33A LTR ERVL 330 516 -7 304 247 214 0 chr2 92630807 92630896 -160625687 + L2 LINE L2 3161 3268 -4 618 197 77 17 chr2 92630906 92631023 -160625560 - AluJo SINE Alu -176 136 13 1501 137 0 5 chr2 92631133 92631352 -160625231 + AluSq SINE Alu 88 305 -8 394 211 0 92 chr2 92631352 92631374 -160625209 + L1MDa LINE L1 2425 2447 -4093 2394 132 42 17 chr2 92631374 92631729 -160624854 + THE1B LTR MaLR 1 364 0 12816 80 11 3 chr2 92631729 92633295 -160623288 + THE1B-int LTR MaLR 1 1580 0 2474 117 36 20 chr2 92633295 92633653 -160622930 + THE1B LTR MaLR 1 364 0 394 211 0 92 chr2 92633653 92633737 -160622846 + L1MDa LINE L1 2444 2523 -4017 690 220 14 0 chr2 92633737 92633878 -160622705 - L1ME LINE L1 -5920 150 8 410 149 15 0 chr2 92634133 92634200 -160622383 - L1 LINE L1 -1413 4733 4666 540 319 62 4 chr2 92634387 92634644 -160621939 + L2 LINE L2 2336 2607 -707 2183 236 26 32 chr2 92634764 92635411 -160621172 - L1M4 LINE L1 -3075 3773 3131 7420 50 10 1 chr2 92635421 92636880 -160619703 - L1PA7 LINE L1 -2 6152 4697 311 309 131 67 chr2 92638059 92638402 -160618181 - L1M4 LINE L1 -5577 1272 908 314 254 22 39 chr2 92639164 92639345 -160617238 + (GGGTG)n Simple_repeat Simple_repeat 3 180 0 * 389 151 0 132 chr2 92639212 92639417 -160617166 + G-rich Low_complexity Low_complexity 3 180 0 608 72 0 36 chr2 92640165 92640248 -160616335 - MADE1 DNA Mariner 0 80 1 261 309 107 34 chr2 92640753 92641044 -160615539 + L1ME LINE L1 5495 5806 -315 21 0 0 31 chr2 92641343 92641358 -160615225 + AT_rich Low_complexity Low_complexity 1 15 -16 2213 116 7 3 chr2 92641358 92641668 -160614915 - AluSx SINE Alu -1 311 1 21 0 0 31 chr2 92641668 92641684 -160614899 + AT_rich Low_complexity Low_complexity 15 31 0 357 312 0 32 chr2 92642464 92642618 -160613965 - MER104 DNA Tc2 -3 177 29 484 270 44 13 chr2 92642756 92642915 -160613668 - MIR SINE MIR 0 262 99 216 92 0 77 chr2 92643680 92643745 -160612838 + (TTAAA)n Simple_repeat Simple_repeat 4 63 0 53 63 0 0 chr2 92643751 92643846 -160612737 + AT_rich Low_complexity Low_complexity 1 95 0 2119 117 0 0 chr2 92644399 92644690 -160611893 + AluY SINE Alu 1 291 -20 2406 50 0 0 chr2 92644975 92645287 -160611296 - AluY SINE Alu 0 312 1 242 326 129 11 chr2 92646941 92647119 -160609464 - Charlie1 DNA MER1_type -2561 200 2 25 31 0 0 chr2 92647484 92647516 -160609067 + AT_rich Low_complexity Low_complexity 1 32 0 27 49 0 0 chr2 92648321 92648362 -160608221 + AT_rich Low_complexity Low_complexity 1 41 0 492 45 15 0 chr2 92648362 92648428 -160608155 - L1PA4 LINE L1 -3 6152 6086 208 240 0 0 chr2 92649882 92649932 -160606651 + (TG)n Simple_repeat Simple_repeat 1 50 0 6992 80 52 5 chr2 92650102 92651063 -160605520 - L1PA7 LINE L1 -2 6152 5182 7263 95 14 7 chr2 92651064 92652104 -160604479 + L1PA7 LINE L1 4123 5170 -976 297 51 0 0 chr2 92652961 92653000 -160603583 + (TG)n Simple_repeat Simple_repeat 2 40 0 315 71 0 0 chr2 92654189 92654231 -160602352 + (TA)n Simple_repeat Simple_repeat 2 43 0 300 182 0 0 chr2 92655861 92655916 -160600667 - MER5A DNA MER1_type -109 80 26 368 147 176 0 chr2 92657715 92657783 -160598800 - MER5A DNA MER1_type -83 106 27 396 114 171 0 chr2 92659583 92659653 -160596930 - MER5A DNA MER1_type -82 107 26 21 0 0 0 chr2 92661184 92661205 -160595378 + AT_rich Low_complexity Low_complexity 1 21 0 2311 99 3 0 chr2 92661542 92661845 -160594738 - AluSp SINE Alu -9 304 1 5025 173 21 2 chr2 92662154 92663078 -160593505 - L1MA3 LINE L1 0 6305 5365 2258 115 0 0 chr2 92663559 92663854 -160592729 - AluSg SINE Alu -15 295 1 2499 40 0 7 chr2 92664885 92665181 -160591402 - AluY SINE Alu -17 294 1 21 36 0 0 chr2 92665216 92665244 -160591339 + AT_rich Low_complexity Low_complexity 1 28 0 12033 33 12 30 chr2 92665881 92668016 -160588567 + L1PA4 LINE L1 4021 6141 -14 812 110 48 163 chr2 92668301 92668473 -160588110 - MER39B LTR ERV1 -452 201 60 2190 125 0 6 chr2 92668473 92668785 -160587798 - AluSx SINE Alu -1 311 2 812 110 48 163 chr2 92668785 92668839 -160587744 - MER39B LTR ERV1 -593 60 1 2341 179 30 36 chr2 92669469 92669939 -160586644 - MLT1C LTR MaLR 0 467 1 1413 94 133 0 chr2 92670454 92670657 -160585926 - MER30 DNA MER1_type 0 230 1 1918 152 14 3 chr2 92670919 92671216 -160585367 - AluSx SINE Alu -12 300 1 237 211 0 0 chr2 92671251 92671303 -160585280 + (TG)n Simple_repeat Simple_repeat 1 52 0 482 279 32 44 chr2 92671356 92671514 -160585069 - MLT1F LTR MaLR -375 167 12 2256 87 81 43 chr2 92671579 92671924 -160584659 - L1PA13 LINE L1 -5 6158 5801 949 203 71 58 chr2 92672078 92672443 -160584140 - L1MC5 LINE L1 -36 7925 7556 260 317 217 31 chr2 92672477 92672638 -160583945 - MIR3 SINE MIR -6 202 12 283 253 88 11 chr2 92672987 92673078 -160583505 - L1MC4a LINE L1 -1902 5906 5809 19499 19 1 0 chr2 92673890 92676919 -160579664 + L1HS LINE L1 3125 6155 0 243 0 0 0 chr2 92676919 92676946 -160579637 + (A)n Simple_repeat Simple_repeat 1 27 0 333 352 46 5 chr2 92677044 92677240 -160579343 - MIR SINE MIR -14 248 45 437 284 31 8 chr2 92677776 92677903 -160578680 - MIR SINE MIR -115 147 18 479 265 75 47 chr2 92677998 92678251 -160578332 - L1MEd LINE L1 -4910 1209 950 914 173 149 5 chr2 92678852 92679060 -160577523 + L1MA4 LINE L1 6057 6294 -6 1341 274 46 14 chr2 92679176 92679592 -160576991 + MLT1E2 LTR MaLR 198 626 0 25 0 0 0 chr2 92680192 92680217 -160576366 + AT_rich Low_complexity Low_complexity 1 25 0 5498 36 9 2 chr2 92680339 92680971 -160575612 + L1PA4 LINE L1 5517 6153 -2 27 29 0 0 chr2 92681473 92681507 -160575076 + AT_rich Low_complexity Low_complexity 1 34 0 283 277 76 98 chr2 92683452 92683636 -160572947 + L2 LINE L2 2563 2742 -572 608 235 7 13 chr2 92683752 92683901 -160572682 - L1MA10 LINE L1 -11 6323 6176 2144 227 26 16 chr2 92683917 92684707 -160571876 - L1MC4a LINE L1 -645 5597 4797 254 188 146 0 chr2 92684774 92684822 -160571761 - Tigger5 DNA MER2_type -2268 55 1 1142 204 47 149 chr2 92684822 92684840 -160571743 - L1MC4a LINE L1 -1349 4797 4779 1916 136 100 6 chr2 92684840 92685170 -160571413 + MER46B DNA MER2_type 1 236 0 1142 204 47 149 chr2 92685170 92685788 -160570795 - L1MC4a LINE L1 -1367 4779 4226 605 231 19 0 chr2 92685834 92685982 -160570601 - MER58B DNA MER1_type -33 308 37 1558 267 34 15 chr2 92686028 92686496 -160570087 - L1MC4a LINE L1 -1939 4207 3731 1519 213 40 6 chr2 92686494 92686823 -160569760 - L1MC1 LINE L1 0 6333 5994 * 21 82 0 0 chr2 92687302 92687351 -160569232 + AT_rich Low_complexity Low_complexity 1 49 0 333 287 70 14 chr2 92687961 92688104 -160568479 - L2 LINE L2 -438 2876 2726 36 0 0 0 chr2 92688750 92688786 -160567797 + AT_rich Low_complexity Low_complexity 1 36 0 26 30 0 0 chr2 92688812 92688845 -160567738 + AT_rich Low_complexity Low_complexity 1 33 0 829 224 27 11 chr2 92689832 92690015 -160566568 - MER58A DNA MER1_type 0 224 39 277 197 115 0 chr2 92690073 92690134 -160566449 - L1M3 LINE L1 -525 5779 5728 2171 144 38 3 chr2 92690722 92691068 -160565515 - MER46B DNA MER2_type -2 234 2 1988 117 40 3 chr2 92692455 92692753 -160563830 - AluY SINE Alu -2 309 1 591 276 45 20 chr2 92693264 92693510 -160563073 + LTR16A LTR ERVL 199 450 0 216 119 24 24 chr2 92694101 92694143 -160562440 + (CAGGG)n Simple_repeat Simple_repeat 4 45 0 267 194 30 0 chr2 92695655 92695722 -160560861 + MLT1K LTR MaLR 516 584 -4 206 214 0 0 chr2 92696846 92696888 -160559695 + G-rich Low_complexity Low_complexity 5 46 0 347 247 195 59 chr2 92697516 92697803 -160558780 + L1M2 LINE L1 906 1231 -5618 435 285 238 37 chr2 92698402 92698785 -160557798 - L2 LINE L2 0 3313 2854 2317 103 19 49 chr2 92699149 92699518 -160557065 + THE1B LTR MaLR 1 358 -6 250 317 50 20 chr2 92699757 92699858 -160556725 - L2 LINE L2 -524 2790 2687 2146 127 73 14 chr2 92700346 92700700 -160555883 + THE1C LTR MaLR 1 375 0 9963 146 18 32 chr2 92700702 92702303 -160554280 + THE1C-int LTR MaLR 3 1580 0 1861 138 80 42 chr2 92702303 92702664 -160553919 + THE1C LTR MaLR 1 375 0 2754 166 36 19 chr2 92702723 92703199 -160553384 + Tigger7 DNA MER2_type 38 521 -212 375 228 11 11 chr2 92703198 92703290 -160553293 + Tigger7 DNA MER2_type 2400 2491 0 * 385 278 75 12 chr2 92703368 92703541 -160553042 + L1MC5 LINE L1 7718 7901 -60 22 0 0 0 chr2 92703657 92703679 -160552904 + AT_rich Low_complexity Low_complexity 1 22 0 7858 44 0 1 chr2 92704412 92705494 -160551089 + L1PA5 LINE L1 5073 6153 -1 24 0 0 0 chr2 92705494 92705518 -160551065 + AT_rich Low_complexity Low_complexity 1 24 0 570 300 45 48 chr2 92705537 92705827 -160550756 + Charlie8 DNA MER1_type 1 289 -2128 234 303 81 11 chr2 92705882 92706207 -160550376 - L1M LINE L1 -743 5403 5055 298 286 106 61 chr2 92706219 92706597 -160549986 - L1MEc LINE L1 -4640 1756 1362 * 354 313 28 7 chr2 92706589 92706733 -160549850 - L1MEc LINE L1 -5292 913 767 1693 172 7 26 chr2 92706796 92707099 -160549484 - AluJo SINE Alu -15 297 1 182 237 68 17 chr2 92707690 92707749 -160548834 + MIR SINE MIR 199 260 -2 210 324 15 0 chr2 92707989 92708057 -160548526 - MIR SINE MIR -35 227 159 633 238 100 59 chr2 92709035 92709325 -160547258 + L1MC5 LINE L1 6747 7048 -913 221 290 177 8 chr2 92709413 92709537 -160547046 - MER5B DNA MER1_type -27 151 7 234 277 115 61 chr2 92709593 92709741 -160546842 + MIR SINE MIR 38 193 -69 555 293 111 58 chr2 92710123 92710502 -160546081 + L1MC4a LINE L1 5576 5974 -1834 3018 140 32 12 chr2 92711459 92711958 -160544625 - L1MB3 LINE L1 -2 6181 5673 1744 153 42 0 chr2 92711983 92712270 -160544313 + AluJb SINE Alu 1 299 -13 1272 191 36 24 chr2 92712440 92712691 -160543892 + MER82 DNA MER2_type 400 653 0 308 218 46 11 chr2 92712737 92712824 -160543759 - L1MC/D LINE L1 -2035 5773 5684 408 297 13 70 chr2 92713363 92713441 -160543142 - MER112 DNA MER1_type -16 244 163 1457 197 51 14 chr2 92713441 92713735 -160542848 + AluJo SINE Alu 3 307 -5 408 297 13 70 chr2 92713735 92713885 -160542698 - MER112 DNA MER1_type -97 163 29 213 39 0 0 chr2 92714982 92715008 -160541575 + (TA)n Simple_repeat Simple_repeat 1 26 0 252 301 144 24 chr2 92715146 92715485 -160541098 - L2 LINE L2 -337 2977 2598 478 213 0 37 chr2 92715572 92715699 -160540884 - MLT1H LTR MaLR -379 170 11 494 252 8 8 chr2 92715899 92716026 -160540557 + LTR67 LTR ERVL 428 554 -3 420 282 121 61 chr2 92716067 92716446 -160540137 + L1MC/D LINE L1 5334 5735 -2073 2304 103 3 0 chr2 92716537 92716837 -160539746 + AluSg SINE Alu 1 301 -9 538 233 92 26 chr2 92716934 92717311 -160539272 - LTR33A LTR ERVL -8 515 64 21 0 0 0 chr2 92717458 92717479 -160539104 + AT_rich Low_complexity Low_complexity 1 21 0 29 78 0 0 chr2 92719793 92719857 -160536726 + AT_rich Low_complexity Low_complexity 1 64 0 258 32 0 0 chr2 92721322 92721353 -160535230 + (TAAAAA)n Simple_repeat Simple_repeat 2 32 0 216 0 0 0 chr2 92721774 92721798 -160534785 + (A)n Simple_repeat Simple_repeat 1 24 0 392 279 101 0 chr2 92722617 92722746 -160533837 - MIR3 SINE MIR -9 199 58 513 292 55 30 chr2 92723605 92723807 -160532776 - MIR SINE MIR -36 226 20 290 280 90 0 chr2 92724423 92724523 -160532060 + MIR3 SINE MIR 100 208 0 231 305 122 8 chr2 92724686 92724817 -160531766 + MIR SINE MIR 111 256 -6 332 330 85 11 chr2 92726405 92726593 -160529990 + MIR3 SINE MIR 4 205 -3 223 192 39 0 chr2 92727598 92727659 -160528924 + MIR SINE MIR 90 145 -63 225 229 42 85 chr2 92729658 92729776 -160526807 + L2 LINE L2 3160 3272 0 249 404 7 0 chr2 92730600 92730741 -160525842 - MIR SINE MIR -17 245 104 268 342 139 10 chr2 92730913 92731115 -160525468 + L2 LINE L2 3044 3271 -1 202 273 0 0 chr2 92731210 92731265 -160525318 + (TGGA)n Simple_repeat Simple_repeat 2 56 0 204 258 129 32 chr2 92732219 92732312 -160524271 + MIR3 SINE MIR 97 198 -10 384 301 43 54 chr2 92732360 92732546 -160524037 + MIR SINE MIR 8 191 -71 188 290 43 14 chr2 92732784 92732853 -160523730 - MIR3 SINE MIR -23 185 115 326 350 51 11 chr2 92732929 92733106 -160523477 + MIR SINE MIR 28 211 -51 221 293 0 27 chr2 92733322 92733397 -160523186 + GA-rich Low_complexity Low_complexity 1 73 0 2828 230 27 89 chr2 92733698 92734697 -160521886 + L2 LINE L2 1426 2362 -952 490 244 48 0 chr2 92734697 92734865 -160521718 + L1M4 LINE L1 4747 4922 -1224 459 202 10 0 chr2 92734922 92735021 -160521562 + L1M4 LINE L1 4906 5005 -1141 1010 278 142 45 chr2 92735026 92735326 -160521257 + L2 LINE L2 2371 2640 -673 1632 116 94 25 chr2 92735326 92735603 -160520980 - AluJb SINE Alu -16 296 1 1010 278 142 45 chr2 92735603 92736096 -160520487 + L2 LINE L2 2640 3313 0 2286 113 3 0 chr2 92736103 92736403 -160520180 + AluSq SINE Alu 1 301 -12 21 36 0 0 chr2 92736674 92736702 -160519881 + AT_rich Low_complexity Low_complexity 1 28 0 221 274 137 0 chr2 92736923 92736996 -160519587 + MIR SINE MIR 64 146 -116 879 214 61 10 chr2 92737219 92737523 -160519060 - MER33 DNA MER1_type -14 310 1 549 234 70 6 chr2 92737640 92737798 -160518785 - MIR SINE MIR 0 262 95 230 287 6 75 chr2 92738304 92738478 -160518105 + CT-rich Low_complexity Low_complexity 4 165 0 291 329 0 0 chr2 92739146 92739228 -160517355 + T-rich Low_complexity Low_complexity 2 83 0 442 304 26 31 chr2 92739288 92739482 -160517101 - MIR SINE MIR -41 221 29 1194 246 26 9 chr2 92739711 92740052 -160516531 - MLT1C LTR MaLR 0 467 121 2634 193 38 100 chr2 92740070 92740842 -160515741 - L1MD2 LINE L1 -17 6225 5502 425 190 15 102 chr2 92740846 92740983 -160515600 - MLT1C LTR MaLR -335 132 8 1272 255 63 20 chr2 92741830 92742334 -160514249 - L1ME3A LINE L1 -14 6156 5589 361 294 80 27 chr2 92742465 92742652 -160513931 - L1ME LINE L1 -314 5807 5611 21 0 0 0 chr2 92747944 92747965 -160508618 + AT_rich Low_complexity Low_complexity 1 21 0 243 322 153 70 chr2 92748487 92748749 -160507834 + L2 LINE L2 2825 3135 -137 2641 42 0 0 chr2 92748749 92749058 -160507525 - AluY SINE Alu -2 309 1 243 322 153 70 chr2 92749058 92749208 -160507375 + L2 LINE L2 3135 3271 -1 693 212 125 16 chr2 92749568 92749752 -160506831 - MIR SINE MIR -11 251 48 241 309 109 6 chr2 92749883 92750048 -160506535 + L1MC/D LINE L1 5668 5849 -1959 322 57 38 0 chr2 92751100 92751153 -160505430 + (GA)n Simple_repeat Simple_repeat 1 55 0 4101 196 22 48 chr2 92752280 92753272 -160503311 - LTR5 LTR ERVK -1 968 3 33 43 0 0 chr2 92753994 92754041 -160502542 + AT_rich Low_complexity Low_complexity 1 47 0 583 146 0 0 chr2 92754182 92754285 -160502298 + LTR37B LTR ERV1 197 299 -169 314 211 0 22 chr2 92754297 92754387 -160502196 + (TATG)n Simple_repeat Simple_repeat 3 90 0 1523 194 19 9 chr2 92754423 92754738 -160501845 + Tigger7 DNA MER2_type 1 318 -2169 693 98 136 0 chr2 92754735 92754867 -160501716 + Tigger7 DNA MER2_type 2303 2452 -39 * 285 98 0 0 chr2 92755200 92755241 -160501342 + (GA)n Simple_repeat Simple_repeat 2 42 0 22 35 0 0 chr2 92755267 92755296 -160501287 + AT_rich Low_complexity Low_complexity 1 29 0 2290 91 0 3 chr2 92755621 92755917 -160500666 - AluSg SINE Alu -15 295 1 928 82 16 38 chr2 92756084 92756215 -160500368 + (TTTC)n Simple_repeat Simple_repeat 1 308 0 928 82 16 38 chr2 92756215 92756399 -160500184 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1730 194 24 13 chr2 92756945 92757326 -160499257 + L1MDa LINE L1 3 387 -6153 813 219 38 38 chr2 92757329 92757566 -160499017 + L1MDa LINE L1 962 1198 -5342 1124 236 32 6 chr2 92757606 92757945 -160498638 + L1MDa LINE L1 3034 3381 -3159 1017 181 94 40 chr2 92757961 92758137 -160498446 + L1MD2 LINE L1 5646 5844 -515 1779 131 6 68 chr2 92758137 92758458 -160498125 + AluJo SINE Alu 1 301 -11 1017 181 94 40 chr2 92758458 92758557 -160498026 + L1MD2 LINE L1 5844 5936 -423 415 253 36 82 chr2 92758616 92758925 -160497658 - L1MC/D LINE L1 -635 5527 5289 270 0 0 0 chr2 92759573 92759603 -160496980 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 396 261 153 51 chr2 92759636 92759989 -160496594 + L1MC5 LINE L1 7547 7935 -26 24 0 0 0 chr2 92760191 92760215 -160496368 + AT_rich Low_complexity Low_complexity 1 24 0 222 230 11 35 chr2 92760928 92761015 -160495568 + A-rich Low_complexity Low_complexity 4 88 0 658 217 65 0 chr2 92761037 92761267 -160495316 + L1ME1 LINE L1 5122 5366 -780 2566 202 51 13 chr2 92761289 92761917 -160494666 + L1ME1 LINE L1 5510 6161 -5 5112 160 6 18 chr2 92762214 92762592 -160493991 - L1PB4 LINE L1 0 6156 5775 234 0 0 0 chr2 92762592 92762618 -160493965 + (CA)n Simple_repeat Simple_repeat 2 27 0 5112 160 6 18 chr2 92762618 92763040 -160493543 - L1PB4 LINE L1 -381 5775 5350 2520 106 22 8 chr2 92763040 92763399 -160493184 - THE1B LTR MaLR 0 364 1 5112 160 6 18 chr2 92763399 92763862 -160492721 - L1PB4 LINE L1 -806 5350 4900 623 318 24 14 chr2 92764239 92764450 -160492133 + MIR SINE MIR 50 262 0 312 262 10 68 chr2 92764523 92764626 -160491957 + L2 LINE L2 2672 2768 -546 465 240 58 58 chr2 92764658 92764812 -160491771 - MER5B DNA MER1_type -2 176 23 757 138 25 25 chr2 92765232 92765392 -160491191 - MER96B DNA MER1_type? -3 414 255 2150 123 3 22 chr2 92765448 92765766 -160490817 - AluSx SINE Alu 0 312 1 450 157 0 0 chr2 92765970 92766040 -160490543 + AluJb SINE Alu 165 234 -78 267 106 21 0 chr2 92766145 92766192 -160490391 - Alu SINE Alu -28 272 225 1219 228 163 34 chr2 92766866 92767374 -160489209 + L2 LINE L2 1998 2571 -743 267 258 20 93 chr2 92767895 92767989 -160488594 - LTR67 LTR ERVL 0 557 477 3116 119 59 41 chr2 92767989 92768578 -160488005 + MER4A LTR ERV1 1 600 0 267 258 20 93 chr2 92768578 92768634 -160487949 - LTR67 LTR ERVL -80 477 418 24 0 0 0 chr2 92768906 92768930 -160487653 + AT_rich Low_complexity Low_complexity 1 24 0 482 250 89 67 chr2 92769166 92769346 -160487237 + MIR3 SINE MIR 2 185 -23 404 211 105 20 chr2 92769556 92769708 -160486875 - MLT1I LTR MaLR -13 396 232 6923 149 9 9 chr2 92772670 92774991 -160481592 - L1MA2 LINE L1 -16 6288 3949 4753 44 3 21 chr2 92775381 92775996 -160480587 - L1PA7 LINE L1 -4 6150 5547 2301 82 0 6 chr2 92775996 92776311 -160480272 + L1P LINE L1 4779 5091 -1055 195 42 0 0 chr2 92776438 92776462 -160480121 + (TAA)n Simple_repeat Simple_repeat 2 25 0 2037 137 0 0 chr2 92776470 92776755 -160479828 - AluSx SINE Alu -27 285 1 409 253 22 0 chr2 92777016 92777107 -160479476 + FLAM_A SINE Alu 40 132 -1 24 0 0 0 chr2 92777319 92777343 -160479240 + AT_rich Low_complexity Low_complexity 1 24 0 616 201 8 45 chr2 92777820 92777954 -160478629 + MER44D DNA MER2_type 4 402 -207 1997 195 3 0 chr2 92778752 92779095 -160477488 + ERVL LTR ERVL 4130 4473 -1291 1332 132 9 9 chr2 92779095 92779322 -160477261 - Cheshire DNA MER1_type -1560 860 634 386 153 0 35 chr2 92779326 92779411 -160477172 - L1M4 LINE L1 -2196 3950 3869 * 2853 261 26 19 chr2 92779390 92780289 -160476294 - L1MCa LINE L1 -1953 4473 3569 1104 190 55 52 chr2 92780262 92780755 -160475828 - L1MCa LINE L1 -3883 2724 2178 * 23 0 0 0 chr2 92780974 92780997 -160475586 + AT_rich Low_complexity Low_complexity 1 23 0 1986 145 56 37 chr2 92781011 92781419 -160475164 - L1MA4 LINE L1 -7 6293 5878 237 233 17 0 chr2 92781420 92781480 -160475103 - L1MCa LINE L1 -4244 2182 2122 1973 189 3 13 chr2 92781564 92781944 -160474639 + MER45R DNA AcHobo 472 847 -734 362 224 40 0 chr2 92782008 92782084 -160474499 + MER45 DNA AcHobo 1503 1581 0 23 0 0 0 chr2 92782220 92782243 -160474340 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 92782455 92782478 -160474105 + AT_rich Low_complexity Low_complexity 1 23 0 296 119 17 0 chr2 92785755 92785814 -160470769 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 294 29 0 0 chr2 92785841 92785876 -160470707 + (TG)n Simple_repeat Simple_repeat 2 36 0 621 283 58 49 chr2 92785963 92786271 -160470312 - L1ME LINE L1 -541 5629 5319 200 143 29 0 chr2 92786350 92786385 -160470198 + (TCTA)n Simple_repeat Simple_repeat 3 38 0 1276 211 46 60 chr2 92786387 92786738 -160469845 + MLT1A1 LTR MaLR 9 354 -11 454 158 105 0 chr2 92786839 92786972 -160469611 - L1 LINE L1 -1757 4389 4243 5821 97 29 0 chr2 92786984 92788026 -160468557 - L1PA10 LINE L1 -11 6157 5087 400 332 66 16 chr2 92788679 92788935 -160467648 + L1MC4a LINE L1 5589 5857 -1951 2969 249 48 13 chr2 92790000 92791109 -160465474 - L1MB8 LINE L1 -6 6172 5015 2065 121 0 3 chr2 92791110 92791416 -160465167 + L1PA12 LINE L1 4038 4342 -1804 6514 87 10 0 chr2 92791452 92793291 -160463292 + L1PA12 LINE L1 4326 6167 -1 506 274 18 6 chr2 92793377 92793541 -160463042 - L1MB8 LINE L1 -1239 4907 4742 2275 185 24 16 chr2 92793565 92793991 -160462592 + Tigger2a DNA MER2_type 6 434 0 1290 221 63 8 chr2 92793995 92794362 -160462221 - L1MB8 LINE L1 -1408 4738 4352 1874 221 79 10 chr2 92794375 92794791 -160461792 - MER82 DNA MER2_type -1 652 208 264 59 0 0 chr2 92794791 92794825 -160461758 + (TG)n Simple_repeat Simple_repeat 2 35 0 14385 134 33 9 chr2 92794833 92796524 -160460059 + Tigger1 DNA MER2_type 6 1770 -648 442 155 0 0 chr2 92796524 92796595 -160459988 + L1PA8A LINE L1 6061 6131 0 14385 134 33 9 chr2 92796595 92797259 -160459324 + Tigger1 DNA MER2_type 1770 2417 -1 588 209 52 0 chr2 92797310 92797444 -160459139 - MER82 DNA MER2_type -480 173 33 3120 264 68 24 chr2 92797473 92798700 -160457883 - L1MB8 LINE L1 -1806 4340 3061 27 0 0 0 chr2 92798756 92798783 -160457800 + AT_rich Low_complexity Low_complexity 1 27 0 1686 241 85 42 chr2 92799018 92799632 -160456951 + MLT1E1 LTR MaLR 13 652 -2 2025 127 0 0 chr2 92799958 92800242 -160456341 + AluSg SINE Alu 22 305 -5 195 129 0 0 chr2 92800653 92800684 -160455899 + (CA)n Simple_repeat Simple_repeat 2 32 0 477 253 13 6 chr2 92802232 92802389 -160454194 + L1M2a LINE L1 1858 2031 -5060 21 0 0 0 chr2 92802595 92802616 -160453967 + AT_rich Low_complexity Low_complexity 1 21 0 186 43 0 0 chr2 92803679 92803702 -160452881 + (A)n Simple_repeat Simple_repeat 1 23 0 227 235 15 0 chr2 92804402 92804470 -160452113 + L1MD2 LINE L1 5112 5180 -966 2008 237 107 35 chr2 92804488 92805203 -160451380 + L1MD2 LINE L1 5592 6359 0 341 209 76 0 chr2 92805550 92805655 -160450928 + (CCTG)n Simple_repeat Simple_repeat 2 114 0 1807 75 8 0 chr2 92805657 92805925 -160450658 + SVA Other Other 3 272 -1114 605 163 0 0 chr2 92905926 92906018 -160350565 + FLAM_C SINE Alu 28 119 -24 2239 101 3 0 chr2 92906056 92906352 -160350231 - AluSx SINE Alu -14 298 2 265 159 0 0 chr2 92906361 92906405 -160350178 - MIR SINE MIR -110 152 109 2114 105 0 7 chr2 92907039 92907333 -160349250 + AluSq SINE Alu 11 302 -11 2294 82 3 3 chr2 92907333 92907636 -160348947 + AluSg SINE Alu 5 307 -3 275 234 8 48 chr2 92907640 92907764 -160348819 - L1M4 LINE L1 -840 5306 5188 216 0 0 0 chr2 92907765 92907789 -160348794 + (T)n Simple_repeat Simple_repeat 1 24 0 1272 57 13 0 chr2 92907792 92907949 -160348634 - AluSq SINE Alu -154 159 1 1725 136 73 4 chr2 92908008 92908281 -160348302 - AluSg SINE Alu -18 292 1 2353 75 16 0 chr2 92908304 92908610 -160347973 - AluY SINE Alu 0 311 1 1661 164 11 0 chr2 92909021 92909289 -160347294 + AluJo SINE Alu 1 271 -41 189 0 0 0 chr2 92909300 92909321 -160347262 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2141 71 0 11 chr2 92909327 92909643 -160346940 + AluSc SINE Alu 1 313 0 2360 46 0 0 chr2 92909644 92909987 -160346596 + AluY SINE Alu 1 343 0 599 146 0 0 chr2 92909994 92910083 -160346500 - FRAM SINE Alu -30 146 58 245 222 16 0 chr2 92910321 92910384 -160346199 + L1ME LINE L1 5614 5677 -487 2109 111 3 13 chr2 92910431 92910738 -160345845 + AluSg SINE Alu 1 304 -6 2471 66 0 0 chr2 92910741 92911045 -160345538 + AluY SINE Alu 1 304 -7 224 120 20 0 chr2 92911048 92911098 -160345485 + (TA)n Simple_repeat Simple_repeat 2 52 0 2230 81 14 0 chr2 92911098 92911394 -160345189 - AluSq SINE Alu -13 300 1 325 231 130 28 chr2 92911434 92911542 -160345041 - L1MC/D LINE L1 -511 5822 5704 1762 156 0 33 chr2 92911543 92911844 -160344739 + AluJo SINE Alu 1 291 -21 2201 106 0 0 chr2 92911844 92912136 -160344447 - AluSx SINE Alu -20 292 1 32 0 0 0 chr2 92912136 92912168 -160344415 + AT_rich Low_complexity Low_complexity 1 32 0 1957 110 57 0 chr2 92912170 92912452 -160344131 + AluSx SINE Alu 1 298 -14 275 284 97 17 chr2 92912748 92912924 -160343659 + L1MB5 LINE L1 5536 5725 -453 325 302 19 0 chr2 92913140 92913246 -160343337 + L1MB5 LINE L1 5830 5937 -237 2387 71 7 0 chr2 92913246 92913555 -160343028 + AluY SINE Alu 1 311 0 458 266 92 24 chr2 92913558 92913765 -160342818 - L1MB5 LINE L1 -27 6147 5927 2491 57 0 16 chr2 92913793 92914109 -160342474 - AluY SINE Alu 0 311 1 1975 112 21 0 chr2 92914161 92914448 -160342135 - AluSx SINE Alu -19 293 1 1677 104 80 59 chr2 92914822 92914967 -160341616 + AluSx SINE Alu 1 141 -171 2234 68 0 20 chr2 92914967 92915291 -160341292 + AluY SINE Alu 1 318 0 1677 104 80 59 chr2 92915291 92915429 -160341154 + AluSx SINE Alu 141 293 -19 243 0 0 0 chr2 92917047 92917074 -160339509 + (TTCC)n Simple_repeat Simple_repeat 4 30 0 835 224 0 0 chr2 92917075 92917218 -160339365 - AluJo/FRAM SINE Alu -36 276 134 2324 83 0 3 chr2 92917219 92917520 -160339063 - AluSg SINE Alu -10 300 1 1674 144 16 60 chr2 92917522 92917721 -160338862 - AluJb SINE Alu -7 305 124 1672 112 124 0 chr2 92917721 92917988 -160338595 + AluSx SINE Alu 1 300 -12 1674 144 16 60 chr2 92917988 92918107 -160338476 - AluJb SINE Alu -188 124 1 2052 41 97 0 chr2 92918493 92918762 -160337821 + AluSp SINE Alu 1 295 -18 1617 115 0 0 chr2 92918841 92919112 -160337471 - AluSg/x SINE Alu 0 310 72 2191 107 3 3 chr2 92919290 92919600 -160336983 + AluSg SINE Alu 1 310 0 2484 61 0 3 chr2 92919676 92919987 -160336596 + AluY SINE Alu 1 310 -1 2228 99 0 0 chr2 92920156 92920449 -160336134 + AluSg SINE Alu 1 293 -17 1829 86 16 8 chr2 92920563 92920818 -160335765 - AluSx SINE Alu -10 302 46 1219 186 122 39 chr2 92920873 92921152 -160335431 - AluJo SINE Alu 0 302 1 2086 111 0 16 chr2 92921570 92921885 -160334698 - AluY SINE Alu -1 310 1 1970 120 0 30 chr2 92921897 92922196 -160334387 - AluSx SINE Alu -22 290 1 272 214 81 20 chr2 92922607 92922721 -160333862 - MLT1C LTR MaLR 0 467 271 652 282 77 3 chr2 92922736 92923023 -160333560 - MLT1C LTR MaLR -154 313 6 191 200 22 0 chr2 92923059 92923104 -160333479 + L2 LINE L2 3015 3060 -253 1477 217 3 0 chr2 92923349 92923648 -160332935 - AluJb SINE Alu -1 311 12 2308 90 7 0 chr2 92923667 92923967 -160332616 - AluSx SINE Alu -10 302 1 462 132 0 0 chr2 92923979 92924047 -160332536 - AluS SINE Alu -244 68 1 * 879 217 32 16 chr2 92924047 92924235 -160332348 - AluJo SINE Alu -16 296 106 2226 97 3 0 chr2 92924241 92924539 -160332044 + AluSq SINE Alu 1 299 -14 765 325 14 0 chr2 92924539 92924834 -160331749 - L1MB8 LINE L1 -259 5919 5621 1661 132 4 4 chr2 92924886 92925137 -160331446 - AluSx SINE Alu -16 296 46 1672 187 3 16 chr2 92925736 92926052 -160330531 + AluJb SINE Alu 1 312 0 1936 107 0 86 chr2 92926407 92926530 -160330053 + AluSx SINE Alu 14 146 -166 2211 76 0 61 chr2 92926530 92926859 -160329724 + AluSc SINE Alu 1 309 0 1266 132 0 20 chr2 92926865 92927062 -160329521 + AluSg/x SINE Alu 120 312 0 343 284 71 14 chr2 92927698 92927839 -160328744 + MLT1D LTR MaLR 8 156 -349 1981 131 0 0 chr2 92927857 92928148 -160328435 - AluSg SINE Alu -1 309 19 * 2185 111 3 3 chr2 92928147 92928453 -160328130 - AluSp SINE Alu -7 306 1 210 306 82 34 chr2 92928481 92928628 -160327955 - L2 LINE L2 -480 2834 2681 210 213 0 50 chr2 92931031 92931111 -160325472 + C-rich Low_complexity Low_complexity 2 77 0 207 247 6 80 chr2 92931202 92931364 -160325219 + C-rich Low_complexity Low_complexity 6 155 0 1801 126 28 47 chr2 92933426 92933744 -160322839 - AluSx SINE Alu 0 312 1 200 176 0 0 chr2 92935242 92935276 -160321307 + CT-rich Low_complexity Low_complexity 2 35 0 23 0 0 0 chr2 92938900 92938923 -160317660 + GC_rich Low_complexity Low_complexity 1 23 0 191 61 30 0 chr2 92941157 92941190 -160315393 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 2062 130 3 0 chr2 92942517 92942816 -160313767 - AluSg SINE Alu -10 300 1 227 30 0 30 chr2 92942818 92942851 -160313732 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 1974 90 25 14 chr2 92942851 92943130 -160313453 - AluY SINE Alu -29 282 1 1141 205 11 42 chr2 92943134 92943417 -160313166 + AluJo SINE Alu 15 288 -24 2069 120 3 0 chr2 92943535 92943827 -160312756 + AluSx SINE Alu 1 293 -19 22 0 0 0 chr2 92945525 92945547 -160311036 + AT_rich Low_complexity Low_complexity 1 22 0 221 111 44 0 chr2 92946032 92946077 -160310506 + C-rich Low_complexity Low_complexity 5 51 0 22 0 0 0 chr2 92946760 92946782 -160309801 + GC_rich Low_complexity Low_complexity 1 22 0 435 92 0 0 chr2 92946853 92946918 -160309665 + (TCC)n Simple_repeat Simple_repeat 1 65 0 22 0 0 0 chr2 92947340 92947362 -160309221 + GC_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr2 92948762 92948792 -160307791 + GC_rich Low_complexity Low_complexity 1 30 0 231 315 24 36 chr2 92949439 92949604 -160306979 + (CCCA)n Simple_repeat Simple_repeat 2 164 0 840 163 19 12 chr2 92949605 92950042 -160306541 + (TCCA)n Simple_repeat Simple_repeat 1 440 0 879 154 16 16 chr2 92950056 92950580 -160306003 + (TCCA)n Simple_repeat Simple_repeat 1 524 0 502 127 0 0 chr2 92950584 92950655 -160305928 - AluSg/x SINE Alu -37 273 203 1001 98 0 0 chr2 92950655 92950788 -160305795 - AluJb SINE Alu -179 133 1 2334 74 0 29 chr2 92950791 92951101 -160305482 - AluSx SINE Alu -11 301 1 1543 189 7 23 chr2 92951357 92951658 -160304925 - AluJb SINE Alu -16 296 1 1698 146 17 37 chr2 92951705 92951999 -160304584 - AluJo SINE Alu -18 294 7 2179 110 0 10 chr2 92952024 92952334 -160304249 - AluSx SINE Alu -5 307 1 1028 55 16 0 chr2 92952334 92952462 -160304121 - AluSq/x SINE Alu -177 136 7 200 219 14 27 chr2 92952651 92952724 -160303859 + C-rich Low_complexity Low_complexity 2 73 0 183 129 0 0 chr2 92953485 92953516 -160303067 + (AGGGGG)n Simple_repeat Simple_repeat 4 34 0 195 42 0 0 chr2 92953795 92953819 -160302764 + (CGGGGG)n Simple_repeat Simple_repeat 1 24 0 24 67 0 0 chr2 92953880 92953925 -160302658 + GC_rich Low_complexity Low_complexity 1 45 0 232 247 13 52 chr2 92954203 92954280 -160302303 - MIR SINE MIR -72 190 117 2225 64 0 3 chr2 92954350 92954659 -160301924 + AluSg SINE Alu 1 308 0 2209 108 0 0 chr2 92954671 92954978 -160301605 + AluSx SINE Alu 1 307 -5 1777 138 11 3 chr2 92955715 92956021 -160300562 - AluSx SINE Alu 0 308 1 2324 70 0 3 chr2 92956021 92956320 -160300263 - AluY SINE Alu -13 298 1 1014 89 0 15 chr2 92956321 92956456 -160300127 - AluJo/FLAM SINE Alu -169 133 1 2314 56 7 0 chr2 92956823 92957128 -160299455 - AluY SINE Alu 0 307 1 1810 172 0 3 chr2 92957370 92957666 -160298917 + AluJo SINE Alu 5 299 -13 975 172 11 0 chr2 92957666 92957840 -160298743 + AluJo/FRAM SINE Alu 134 309 -3 895 219 28 25 chr2 92957840 92958086 -160298497 - L1MB7 LINE L1 -31 6153 5907 1272 107 0 0 chr2 92958086 92958264 -160298319 - AluSg/x SINE Alu -1 309 132 2312 91 3 0 chr2 92958264 92958562 -160298021 - AluSp SINE Alu -14 299 1 2172 99 0 3 chr2 92958615 92958928 -160297655 + AluSq SINE Alu 4 315 0 202 261 0 0 chr2 92959486 92959532 -160297051 - MIR SINE MIR -140 122 77 215 328 0 66 chr2 92960111 92960294 -160296289 + G-rich Low_complexity Low_complexity 4 174 0 * 237 302 11 67 chr2 92960245 92960424 -160296159 + GA-rich Low_complexity Low_complexity 5 173 0 336 273 11 64 chr2 92960468 92960655 -160295928 + GA-rich Low_complexity Low_complexity 2 178 0 240 286 0 87 chr2 92960697 92960893 -160295690 + G-rich Low_complexity Low_complexity 1 179 0 738 185 0 8 chr2 92961318 92961448 -160295135 + FLAM_C SINE Alu 1 129 -14 351 0 0 0 chr2 92961448 92961487 -160295096 + (TG)n Simple_repeat Simple_repeat 2 40 0 2226 84 0 0 chr2 92961492 92961779 -160294804 + AluSg SINE Alu 2 288 -22 841 99 0 8 chr2 92961970 92962091 -160294492 - AluSq/x SINE Alu -192 120 1 2271 80 3 10 chr2 92962590 92962889 -160293694 - AluSg SINE Alu -13 297 1 202 305 17 0 chr2 92962896 92962955 -160293628 - L2 LINE L2 -16 3297 3238 262 255 19 38 chr2 92963085 92963191 -160293392 - L2 LINE L2 -352 2961 2858 219 230 0 27 chr2 92963413 92963487 -160293096 + C-rich Low_complexity Low_complexity 5 76 0 201 310 26 86 chr2 92963649 92963765 -160292818 - MIR SINE MIR -78 184 76 2040 68 11 0 chr2 92963769 92964034 -160292549 + AluSx SINE Alu 30 297 -15 26 30 0 0 chr2 92964098 92964131 -160292452 + AT_rich Low_complexity Low_complexity 1 33 0 1526 162 18 67 chr2 92964153 92964309 -160292274 + AluJb SINE Alu 1 134 -178 2477 47 3 0 chr2 92964309 92964606 -160291977 + AluY SINE Alu 1 298 -13 1526 162 18 67 chr2 92964606 92964777 -160291806 + AluJb SINE Alu 134 312 0 518 0 0 16 chr2 92964790 92964853 -160291730 + (GAA)n Simple_repeat Simple_repeat 2 63 0 470 184 0 0 chr2 92964853 92964929 -160291654 + FRAM SINE Alu 21 96 -80 2016 140 0 22 chr2 92964929 92965244 -160291339 - AluSx SINE Alu -4 308 1 657 183 0 17 chr2 92965244 92965364 -160291219 - AluJb SINE Alu -13 299 182 2089 122 0 3 chr2 92965388 92965700 -160290883 + AluSx SINE Alu 1 311 -1 1234 296 30 6 chr2 92965700 92966173 -160290410 - L1MB5 LINE L1 -46 6128 5645 2594 27 0 0 chr2 92966181 92966480 -160290103 - AluY SINE Alu -12 299 1 200 152 0 0 chr2 92966593 92966626 -160289957 - MIR SINE MIR -64 144 112 2512 71 0 0 chr2 92967416 92967727 -160288856 + AluSx SINE Alu 1 311 -1 230 234 9 0 chr2 92967740 92967847 -160288736 + GA-rich Low_complexity Low_complexity 1 108 0 529 138 31 25 chr2 92967873 92968032 -160288551 + (CAGAGA)n Simple_repeat Simple_repeat 5 164 0 249 186 90 30 chr2 92968465 92968539 -160288044 - L1MB8 LINE L1 0 6184 6105 540 89 13 0 chr2 92968552 92968631 -160287952 + FLAM_A SINE Alu 53 132 -10 1900 104 56 17 chr2 92968631 92968919 -160287664 + AluSq SINE Alu 1 299 -14 254 306 37 46 chr2 92968921 92969029 -160287554 - MIR SINE MIR -66 196 90 2144 100 0 0 chr2 92969084 92969373 -160287210 - AluSg SINE Alu -21 289 1 2675 23 0 0 chr2 92969383 92969687 -160286896 - AluY SINE Alu -7 304 1 1656 146 0 108 chr2 92969715 92970038 -160286545 + AluJo SINE Alu 1 288 -14 207 185 62 12 chr2 92970038 92970119 -160286464 + (TA)n Simple_repeat Simple_repeat 1 85 0 366 264 47 27 chr2 92970120 92970134 -160286449 + L1MC4 LINE L1 7294 7306 -736 2039 102 10 33 chr2 92970134 92970438 -160286145 + AluSx SINE Alu 1 297 -15 366 264 47 27 chr2 92970438 92970571 -160286012 + L1MC4 LINE L1 7306 7444 -598 273 244 67 0 chr2 92971168 92971258 -160285325 - MER20 DNA MER1_type -116 103 8 2317 92 0 9 chr2 92971462 92971777 -160284806 - AluSx SINE Alu 0 312 1 666 250 65 5 chr2 92971803 92972003 -160284580 - MER20 DNA MER1_type -3 216 5 283 305 70 23 chr2 92972779 92972907 -160283676 + MIR SINE MIR 116 249 -13 1149 113 0 0 chr2 92972907 92973139 -160283444 + (TGAA)n Simple_repeat Simple_repeat 1 232 0 2506 58 0 0 chr2 92973227 92973538 -160283045 - AluY SINE Alu 0 311 1 1710 123 0 0 chr2 92973539 92973774 -160282809 - AluSx SINE Alu -14 298 64 202 171 0 0 chr2 92973779 92973814 -160282769 + MIR SINE MIR 110 144 -118 279 130 0 0 chr2 92973830 92973884 -160282699 + (T)n Simple_repeat Simple_repeat 1 54 0 1296 99 0 17 chr2 92973925 92974098 -160282485 - AluSg/x SINE Alu -6 306 135 2262 86 0 10 chr2 92974098 92974400 -160282183 - AluSc SINE Alu -10 299 1 2059 119 0 13 chr2 92974424 92974727 -160281856 - AluJb SINE Alu -13 299 1 201 289 0 0 chr2 92975604 92975649 -160280934 - L2 LINE L2 -3 3310 3266 465 238 29 6 chr2 92975729 92976041 -160280542 + C-rich Low_complexity Low_complexity 1 319 0 347 253 7 96 chr2 92976207 92976331 -160280252 + L2 LINE L2 3181 3292 -21 1570 161 30 54 chr2 92976331 92976458 -160280125 + AluJb SINE Alu 1 129 -183 2195 116 0 0 chr2 92976458 92976759 -160279824 - AluSx SINE Alu -11 301 1 1570 161 30 54 chr2 92976759 92976929 -160279654 + AluJb SINE Alu 129 291 -21 347 253 7 96 chr2 92976929 92976950 -160279633 + L2 LINE L2 3292 3313 0 2226 98 26 0 chr2 92976951 92977256 -160279327 + AluSq SINE Alu 1 313 0 635 156 0 0 chr2 92977273 92977369 -160279214 + AluS SINE Alu 1 96 -217 534 101 0 0 chr2 92977392 92977484 -160279099 + AluSg/x SINE Alu 212 303 0 191 222 270 0 chr2 92977960 92978023 -160278560 + MIR SINE MIR 69 148 -114 1559 129 4 12 chr2 92978257 92978498 -160278085 - AluSq SINE Alu -15 298 60 1892 154 0 3 chr2 92978535 92978828 -160277755 + AluJo SINE Alu 1 292 -20 937 121 0 20 chr2 92978831 92979013 -160277570 + AluSg/x SINE Alu 166 312 0 258 0 0 29 chr2 92978948 92979109 -160277474 + (CAAAA)n Simple_repeat Simple_repeat 3 162 0 343 299 102 22 chr2 92979922 92980059 -160276524 + MIR3 SINE MIR 50 197 -11 2204 98 0 0 chr2 92980502 92980798 -160275785 - AluSx SINE Alu -3 309 14 1335 126 24 0 chr2 92980824 92981031 -160275552 - AluJo SINE Alu -18 294 83 2317 79 20 0 chr2 92981200 92981505 -160275078 - AluSx SINE Alu -1 311 1 510 300 18 35 chr2 92981522 92981692 -160274891 - MIR SINE MIR -48 214 48 230 132 0 0 chr2 92981981 92982019 -160274564 - L2 LINE L2 -14 3258 3221 213 316 13 0 chr2 92982365 92982444 -160274139 - L3 LINE CR1 -40 1537 1458 231 190 69 17 chr2 92983131 92983189 -160273394 + MER53 DNA DNA 1 61 -128 461 52 0 0 chr2 92983237 92983295 -160273288 + AluY SINE Alu 77 134 -177 2135 119 0 0 chr2 92983295 92983597 -160272986 + AluSx SINE Alu 1 302 -10 339 290 9 2 chr2 92984131 92984278 -160272305 + MIR SINE MIR 48 147 -61 25 31 0 0 chr2 92984917 92984949 -160271634 + GC_rich Low_complexity Low_complexity 1 32 0 242 230 149 0 chr2 92985043 92985117 -160271466 + MIR SINE MIR 108 192 -70 1852 92 67 25 chr2 92985674 92985958 -160270625 + AluSg SINE Alu 2 297 -13 569 207 0 67 chr2 92986023 92986158 -160270425 - AluJ SINE Alu -62 250 125 389 280 83 42 chr2 92986180 92986348 -160270235 + L1MC5 LINE L1 7577 7751 -210 189 107 0 0 chr2 92986351 92986379 -160270204 + (TA)n Simple_repeat Simple_repeat 2 29 0 2128 95 3 0 chr2 92986379 92986663 -160269920 - AluY SINE Alu -25 286 2 859 126 0 15 chr2 92986667 92986802 -160269781 - AluJ SINE Alu -179 133 1 857 99 0 0 chr2 92987808 92987919 -160268664 + AluJb SINE Alu 1 111 -201 238 26 51 0 chr2 92987927 92987966 -160268617 + (TAAAA)n Simple_repeat Simple_repeat 1 41 0 1795 104 75 11 chr2 92987972 92988250 -160268333 + AluSx SINE Alu 1 296 -16 2058 113 3 13 chr2 92988254 92988624 -160267959 + AluSp SINE Alu 6 313 0 2526 33 3 0 chr2 92988721 92989020 -160267563 - AluY SINE Alu -11 300 1 2275 102 0 9 chr2 92989071 92989459 -160267124 + AluSx SINE Alu 1 385 0 2517 61 3 0 chr2 92989463 92989773 -160266810 + AluY SINE Alu 1 311 0 825 157 0 20 chr2 92989959 92990106 -160266477 + FRAM SINE Alu 20 163 -13 713 219 0 0 chr2 92990160 92990297 -160266286 - FLAM_C SINE Alu -6 137 1 377 211 169 30 chr2 92990484 92990650 -160265933 + MLT1K LTR MaLR 380 568 -20 1965 71 31 87 chr2 92991686 92992009 -160264574 - AluSg SINE Alu -3 307 3 213 299 9 28 chr2 92992883 92992990 -160263593 + C-rich Low_complexity Low_complexity 4 108 0 313 310 0 23 chr2 92993812 92993983 -160262600 + G-rich Low_complexity Low_complexity 6 172 0 1454 145 4 62 chr2 92994786 92995062 -160261521 + AluJo SINE Alu 41 300 -12 2194 103 0 16 chr2 92995066 92995376 -160261207 + AluSx SINE Alu 7 311 -1 261 0 0 0 chr2 92995481 92995510 -160261073 + (CA)n Simple_repeat Simple_repeat 1 29 0 283 349 139 0 chr2 92995589 92995761 -160260822 - MIR SINE MIR -19 243 48 2324 99 0 3 chr2 92995964 92996276 -160260307 + AluY SINE Alu 1 311 0 2261 75 10 3 chr2 92996292 92996587 -160259996 + AluY SINE Alu 1 297 -14 188 339 0 17 chr2 92996698 92996757 -160259826 - L2 LINE L2 -14 3299 3242 2218 73 13 3 chr2 92996872 92997172 -160259411 - AluSp SINE Alu -10 303 1 736 183 49 21 chr2 92997172 92997309 -160259274 - AluJo SINE Alu -171 141 1 216 283 34 34 chr2 92997987 92998164 -160258419 + (CCCG)n Simple_repeat Simple_repeat 4 180 0 271 176 44 59 chr2 92998934 92999070 -160257513 + (CAGAGA)n Simple_repeat Simple_repeat 2 135 0 377 220 40 87 chr2 93001197 93001347 -160255236 + MIR SINE MIR 35 177 -85 429 213 88 0 chr2 93001354 93001490 -160255093 + MER77 LTR ERV1 11 158 -447 1929 148 3 0 chr2 93001631 93001934 -160254649 + AluSx SINE Alu 1 304 -8 223 320 40 20 chr2 93002979 93003079 -160253504 - L2 LINE L2 -27 3286 3185 342 189 17 46 chr2 93003101 93003340 -160253243 + G-rich Low_complexity Low_complexity 1 231 0 379 220 78 5 chr2 93003633 93003771 -160252812 + MER20 DNA MER1_type 33 178 -58 211 347 0 0 chr2 93004370 93004546 -160252037 + G-rich Low_complexity Low_complexity 3 178 0 * 213 190 0 150 chr2 93004447 93004547 -160252036 + (CGGGG)n Simple_repeat Simple_repeat 5 89 0 2045 58 12 0 chr2 93005467 93005725 -160250858 - AluY SINE Alu -49 262 2 417 121 0 0 chr2 93005752 93005810 -160250773 + AluS SINE Alu 2 59 -259 304 261 45 11 chr2 93005820 93005908 -160250675 + MIR SINE MIR 80 170 -92 1155 192 44 0 chr2 93005960 93006189 -160250394 + AluJb SINE Alu 49 287 -25 2150 91 0 3 chr2 93006224 93006510 -160250073 + AluSx SINE Alu 28 312 0 446 244 55 8 chr2 93006962 93007089 -160249494 + MER20 DNA MER1_type 5 137 -82 520 158 40 10 chr2 93007181 93007282 -160249301 + AluJo SINE Alu 33 136 -176 221 26 0 77 chr2 93008992 93009031 -160247552 + (CCCCAG)n Simple_repeat Simple_repeat 2 37 0 224 26 0 79 chr2 93009285 93009323 -160247260 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 302 89 0 54 chr2 93009863 93009919 -160246664 + (CCCCAG)n Simple_repeat Simple_repeat 3 55 0 245 0 0 79 chr2 93010061 93010099 -160246484 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 219 193 53 100 chr2 93010129 93010279 -160246304 + (CCCCAG)n Simple_repeat Simple_repeat 3 145 0 245 0 0 79 chr2 93010309 93010347 -160246236 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 245 0 0 79 chr2 93011266 93011304 -160245279 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 302 89 0 54 chr2 93011334 93011390 -160245193 + (CCCCAG)n Simple_repeat Simple_repeat 3 55 0 245 0 0 79 chr2 93011476 93011514 -160245069 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 245 0 0 79 chr2 93011774 93011812 -160244771 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 248 125 0 54 chr2 93011842 93011898 -160244685 + (CCCCAG)n Simple_repeat Simple_repeat 3 55 0 302 89 0 54 chr2 93012264 93012320 -160244263 + (CCCCAG)n Simple_repeat Simple_repeat 3 55 0 245 0 0 79 chr2 93012462 93012500 -160244083 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 189 0 0 0 chr2 93012598 93012619 -160243964 + (CCCCAG)n Simple_repeat Simple_repeat 3 23 0 245 0 0 79 chr2 93012716 93012754 -160243829 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 215 91 0 68 chr2 93013520 93013564 -160243019 + (CCCCAG)n Simple_repeat Simple_repeat 3 43 0 245 0 0 79 chr2 93013706 93013744 -160242839 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 189 0 0 0 chr2 93013842 93013863 -160242720 + (CCCCAG)n Simple_repeat Simple_repeat 3 23 0 245 0 0 79 chr2 93013960 93013998 -160242585 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 191 0 0 94 chr2 93014708 93014740 -160241843 + (CCCCAG)n Simple_repeat Simple_repeat 3 31 0 245 0 0 79 chr2 93014882 93014920 -160241663 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 214 182 23 80 chr2 93014950 93015038 -160241545 + (CCCCAG)n Simple_repeat Simple_repeat 3 85 0 245 0 0 79 chr2 93015156 93015194 -160241389 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 245 0 0 79 chr2 93015280 93015318 -160241265 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 245 0 0 79 chr2 93016116 93016154 -160240429 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 215 120 0 60 chr2 93016184 93016234 -160240349 + (CCCCAG)n Simple_repeat Simple_repeat 3 49 0 189 0 0 0 chr2 93016264 93016285 -160240298 + (CCCCAG)n Simple_repeat Simple_repeat 3 23 0 263 0 0 75 chr2 93016380 93016420 -160240163 + (CCCCAG)n Simple_repeat Simple_repeat 1 37 0 192 40 0 0 chr2 93017040 93017065 -160239518 + (CCCCG)n Simple_repeat Simple_repeat 5 29 0 335 97 0 48 chr2 93018373 93018435 -160238148 + (CCCCAG)n Simple_repeat Simple_repeat 3 61 0 245 0 0 79 chr2 93018577 93018615 -160237968 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 248 125 0 54 chr2 93018645 93018701 -160237882 + (CCCCAG)n Simple_repeat Simple_repeat 3 55 0 189 0 0 0 chr2 93018731 93018752 -160237831 + (CCCCAG)n Simple_repeat Simple_repeat 3 23 0 245 0 0 79 chr2 93018849 93018887 -160237696 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 262 186 66 98 chr2 93021269 93021452 -160235131 + (CCCCAG)n Simple_repeat Simple_repeat 3 179 0 2265 71 3 19 chr2 93022227 93022537 -160234046 + AluSx SINE Alu 1 305 -7 227 221 0 89 chr2 93023110 93023538 -160233045 + G-rich Low_complexity Low_complexity 1 389 0 225 216 47 47 chr2 93023567 93023738 -160232845 + (CGGGG)n Simple_repeat Simple_repeat 1 171 0 211 221 49 43 chr2 93023867 93024030 -160232553 + (CGGGG)n Simple_repeat Simple_repeat 1 164 0 912 125 7 7 chr2 93024291 93024443 -160232140 + AluY SINE Alu 159 310 -1 1178 298 30 8 chr2 93024443 93024917 -160231666 - L1MB5 LINE L1 -46 6128 5645 2606 27 0 0 chr2 93024925 93025225 -160231358 - AluY SINE Alu -11 300 1 200 152 0 0 chr2 93025338 93025371 -160231212 - MIR SINE MIR -64 144 112 225 216 47 47 chr2 93025703 93025874 -160230709 + (CCCCG)n Simple_repeat Simple_repeat 1 171 0 * 227 221 0 89 chr2 93025821 93026011 -160230572 + C-rich Low_complexity Low_complexity 3 175 0 2535 64 0 0 chr2 93026524 93026835 -160229748 + AluSx SINE Alu 1 311 -1 320 356 121 23 chr2 93026864 93027170 -160229413 + HAL1 LINE L1 875 1210 -1297 249 186 90 30 chr2 93027597 93027671 -160228912 - L1MB8 LINE L1 0 6184 6105 540 89 13 0 chr2 93027684 93027763 -160228820 + FLAM_A SINE Alu 53 132 -10 1900 104 56 17 chr2 93027763 93028051 -160228532 + AluSq SINE Alu 1 299 -14 254 306 37 46 chr2 93028053 93028161 -160228422 - MIR SINE MIR -66 196 90 846 216 93 95 chr2 93028336 93028698 -160227885 + MLT1C LTR MaLR 38 400 -67 1506 158 55 38 chr2 93028698 93028849 -160227734 - AluJo SINE Alu -10 302 155 1944 122 10 14 chr2 93028849 93029144 -160227439 - AluSp SINE Alu -19 294 1 1506 158 55 38 chr2 93029144 93029283 -160227300 - AluJo SINE Alu -157 155 7 846 216 93 95 chr2 93029283 93029351 -160227232 + MLT1C LTR MaLR 400 467 0 306 250 0 0 chr2 93029394 93029458 -160227125 - MIR SINE MIR -157 105 42 1979 95 12 58 chr2 93031037 93031156 -160225427 + AluSx SINE Alu 1 124 -188 2229 56 9 66 chr2 93031156 93031475 -160225108 + AluY SINE Alu 1 301 -10 1979 95 12 58 chr2 93031475 93031682 -160224901 + AluSx SINE Alu 124 312 0 232 247 11 81 chr2 93033633 93033819 -160222764 + (CACCC)n Simple_repeat Simple_repeat 5 177 0 * 300 261 11 69 chr2 93033753 93033941 -160222642 + C-rich Low_complexity Low_complexity 2 178 0 364 271 45 58 chr2 93035306 93035376 -160221207 - MIR SINE MIR -45 217 148 1495 129 31 111 chr2 93035376 93035701 -160220882 + AluJo SINE Alu 1 299 -13 1981 142 0 13 chr2 93035704 93036006 -160220577 + AluSx SINE Alu 1 298 -14 364 271 45 58 chr2 93036006 93036086 -160220497 - MIR SINE MIR -116 146 65 715 216 48 24 chr2 93036648 93036815 -160219768 + AluJo SINE Alu 120 290 -22 2333 73 0 3 chr2 93036817 93037120 -160219463 + AluY SINE Alu 1 302 -9 199 242 8 91 chr2 93037205 93037337 -160219246 + L2 LINE L2 2830 2950 -322 892 149 0 2 chr2 93037600 93037841 -160218742 + AluJ SINE Alu 1 299 -13 2166 105 0 3 chr2 93037973 93038267 -160218316 + AluSx SINE Alu 1 293 -19 1807 109 28 35 chr2 93038271 93038554 -160218029 + AluSp SINE Alu 2 282 -31 221 26 0 77 chr2 93039276 93039315 -160217268 + (CCCCAG)n Simple_repeat Simple_repeat 2 37 0 299 0 0 68 chr2 93039401 93039445 -160217138 + (CCCCAG)n Simple_repeat Simple_repeat 3 43 0 245 0 0 79 chr2 93039587 93039625 -160216958 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 191 0 0 94 chr2 93039655 93039687 -160216896 + (CCCCAG)n Simple_repeat Simple_repeat 3 31 0 245 0 0 79 chr2 93039867 93039905 -160216678 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 245 0 0 79 chr2 93039991 93040029 -160216554 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 245 0 0 79 chr2 93040059 93040097 -160216486 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 236 68 0 68 chr2 93040127 93040171 -160216412 + (CCCCAG)n Simple_repeat Simple_repeat 3 43 0 191 0 0 94 chr2 93040257 93040289 -160216294 + (CCCCAG)n Simple_repeat Simple_repeat 3 31 0 245 0 0 79 chr2 93040549 93040587 -160215996 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 248 125 0 54 chr2 93040617 93040673 -160215910 + (CCCCAG)n Simple_repeat Simple_repeat 3 55 0 189 0 0 0 chr2 93040703 93040724 -160215859 + (CCCCAG)n Simple_repeat Simple_repeat 3 23 0 191 0 0 94 chr2 93040765 93040797 -160215786 + (CCCCAG)n Simple_repeat Simple_repeat 3 31 0 263 0 0 75 chr2 93040825 93040865 -160215718 + (CCCCAG)n Simple_repeat Simple_repeat 1 37 0 215 91 0 68 chr2 93042922 93042966 -160213617 + (CCCCAG)n Simple_repeat Simple_repeat 3 43 0 245 0 0 79 chr2 93043108 93043146 -160213437 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 215 120 0 60 chr2 93043176 93043226 -160213357 + (CCCCAG)n Simple_repeat Simple_repeat 3 49 0 189 0 0 0 chr2 93043256 93043277 -160213306 + (CCCCAG)n Simple_repeat Simple_repeat 3 23 0 245 0 0 79 chr2 93043374 93043412 -160213171 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 2265 71 3 19 chr2 93045136 93045446 -160211137 + AluSx SINE Alu 1 305 -7 190 265 36 48 chr2 93045611 93045694 -160210889 - MIR SINE MIR -96 166 85 359 154 39 0 chr2 93046356 93046434 -160210149 + MLT1K LTR MaLR 159 239 -349 1570 155 9 60 chr2 93046724 93047040 -160209543 + AluJo SINE Alu 1 300 -12 488 242 33 0 chr2 93049015 93049135 -160207448 + FLAM_C SINE Alu 4 127 -16 457 284 39 6 chr2 93049608 93050001 -160206582 + MLT1D LTR MaLR 1 433 -72 401 265 129 48 chr2 93050564 93050747 -160205836 + MIR SINE MIR 18 209 -53 275 274 10 59 chr2 93050761 93050863 -160205720 - MER58B DNA MER1_type -17 324 228 2016 146 0 9 chr2 93051079 93051394 -160205189 + AluSq SINE Alu 1 312 -1 2252 87 0 0 chr2 93051671 93051959 -160204624 + AluSg SINE Alu 1 288 -22 962 259 39 65 chr2 93051961 93052206 -160204377 + L1MB7 LINE L1 5803 6053 -131 2123 118 0 3 chr2 93052206 93052519 -160204064 + AluSx SINE Alu 1 312 0 2313 90 0 7 chr2 93052525 93052835 -160203748 + AluSx SINE Alu 1 308 -4 962 259 39 65 chr2 93052835 93052965 -160203618 + L1MB7 LINE L1 6058 6175 -9 283 312 7 29 chr2 93054806 93054944 -160201639 + L1ME4a LINE L1 5966 6100 -21 260 284 94 39 chr2 93055540 93055863 -160200720 - L2 LINE L2 -253 3019 2589 285 219 0 77 chr2 93057167 93057350 -160199233 + C-rich Low_complexity Low_complexity 5 173 0 661 0 0 0 chr2 93057832 93057911 -160198672 + U6 snRNA snRNA 1 79 -28 1445 92 0 57 chr2 93058028 93058257 -160198326 + AluSg/x SINE Alu 85 300 -12 1367 85 0 16 chr2 93058586 93058774 -160197809 - AluSg/x SINE Alu -19 291 107 2400 57 3 0 chr2 93058775 93059072 -160197511 - AluY SINE Alu -13 298 1 2097 93 4 0 chr2 93059364 93059679 -160196904 - AluSx SINE Alu 0 316 1 288 284 58 34 chr2 93060060 93060206 -160196377 - MIR SINE MIR -58 150 7 2136 85 3 10 chr2 93060493 93060788 -160195795 + AluSc SINE Alu 17 309 0 2071 125 6 10 chr2 93060889 93061202 -160195381 + AluSx SINE Alu 1 312 0 21 36 0 0 chr2 93061450 93061478 -160195105 + GC_rich Low_complexity Low_complexity 1 28 0 198 111 0 28 chr2 93061599 93061635 -160194948 - MIR SINE MIR -65 143 109 2170 111 0 25 chr2 93062079 93062394 -160194189 + AluSx SINE Alu 2 308 -4 1543 142 55 25 chr2 93062471 93062608 -160193975 + AluJb SINE Alu 5 137 -175 2264 85 10 0 chr2 93062608 93062901 -160193682 + AluSp SINE Alu 1 296 -17 1543 142 55 25 chr2 93062901 93063038 -160193545 + AluJb SINE Alu 137 287 -25 913 135 0 0 chr2 93063049 93063182 -160193401 + FLAM_C SINE Alu 1 133 0 180 111 0 0 chr2 93063243 93063270 -160193313 + (CAAT)n Simple_repeat Simple_repeat 1 27 0 265 194 29 72 chr2 93063336 93063407 -160193176 + (TAA)n Simple_repeat Simple_repeat 3 76 -59 2243 50 0 7 chr2 93063407 93063714 -160192869 + AluY SINE Alu 6 310 0 265 194 29 72 chr2 93063714 93063728 -160192855 + (TAA)n Simple_repeat Simple_repeat 76 89 -46 2104 106 0 0 chr2 93063728 93064012 -160192571 + AluSg SINE Alu 1 284 -26 265 194 29 72 chr2 93064012 93064063 -160192520 + (TAA)n Simple_repeat Simple_repeat 89 135 0 318 348 35 0 chr2 93064110 93064251 -160192332 - MIR SINE MIR -76 186 41 360 308 14 19 chr2 93064608 93064963 -160191620 + G-rich Low_complexity Low_complexity 1 353 0 299 326 11 28 chr2 93065041 93065222 -160191361 + G-rich Low_complexity Low_complexity 3 180 0 209 139 23 0 chr2 93065545 93065588 -160190995 + G-rich Low_complexity Low_complexity 4 47 0 40 79 0 0 chr2 93065608 93065697 -160190886 + GC_rich Low_complexity Low_complexity 1 89 0 32 67 0 0 chr2 93065786 93065846 -160190737 + GC_rich Low_complexity Low_complexity 1 60 0 818 169 0 0 chr2 93066428 93066552 -160190031 + AluJo/FLAM SINE Alu 8 131 -181 2383 35 3 0 chr2 93066553 93066859 -160189724 + AluY SINE Alu 1 307 0 1965 132 23 10 chr2 93066869 93067173 -160189410 + AluSx SINE Alu 1 308 -4 2363 93 0 0 chr2 93067174 93067484 -160189099 + AluY SINE Alu 1 310 -1 2063 121 23 0 chr2 93067818 93068123 -160188460 - AluSx SINE Alu 0 312 1 838 152 0 0 chr2 93068311 93068436 -160188147 + FLAM_C SINE Alu 1 125 -18 1341 38 0 0 chr2 93068442 93068600 -160187983 + L1PA3 LINE L1 5998 6155 0 330 211 99 0 chr2 93068600 93068671 -160187912 + L1M4 LINE L1 4349 4426 -1720 2204 91 3 0 chr2 93068676 93068974 -160187609 + AluSq SINE Alu 1 299 -14 2213 72 3 3 chr2 93068974 93069278 -160187305 + AluY SINE Alu 1 304 -7 25 0 0 0 chr2 93070498 93070523 -160186060 + GC_rich Low_complexity Low_complexity 1 25 0 255 365 32 0 chr2 93070764 93070890 -160185693 - MIR SINE MIR -109 153 24 200 146 21 21 chr2 93073117 93073165 -160183418 + (CCG)n Simple_repeat Simple_repeat 1 48 0 2252 80 3 3 chr2 93073611 93073913 -160182670 - AluSx SINE Alu -8 304 3 709 155 80 37 chr2 93073939 93074008 -160182575 + L1PB1 LINE L1 5725 5790 -361 270 0 0 0 chr2 93074008 93074038 -160182545 + (CA)n Simple_repeat Simple_repeat 1 30 0 709 155 80 37 chr2 93074038 93074155 -160182428 + L1PB1 LINE L1 5790 5919 -232 1436 39 6 6 chr2 93074157 93074335 -160182248 - AluY SINE Alu -119 192 15 2075 129 0 0 chr2 93074828 93075122 -160181461 - AluSq SINE Alu -10 303 10 1959 138 7 0 chr2 93075124 93075415 -160181168 - AluJo SINE Alu -19 293 1 674 172 66 0 chr2 93075425 93075547 -160181036 - AluJo SINE Alu -176 136 7 2274 100 0 6 chr2 93075552 93075863 -160180720 - AluSx SINE Alu -3 309 1 229 254 0 32 chr2 93076553 93076616 -160179967 - MIR SINE MIR -109 153 93 2220 99 3 0 chr2 93076953 93077256 -160179327 - AluSx SINE Alu -8 304 1 213 313 0 0 chr2 93077579 93077643 -160178940 + MIR SINE MIR 108 171 -91 223 336 69 9 chr2 93077962 93078078 -160178505 - MIR SINE MIR -118 144 22 21 0 0 0 chr2 93078449 93078470 -160178113 + GC_rich Low_complexity Low_complexity 1 21 0 35 0 0 0 chr2 93078539 93078574 -160178009 + GC_rich Low_complexity Low_complexity 1 35 0 23 68 0 0 chr2 93078698 93078742 -160177841 + GC_rich Low_complexity Low_complexity 1 44 0 23 68 0 0 chr2 93079229 93079273 -160177310 + GC_rich Low_complexity Low_complexity 1 44 0 23 0 0 0 chr2 93079383 93079406 -160177177 + GC_rich Low_complexity Low_complexity 1 23 0 230 303 30 0 chr2 93081265 93081331 -160175252 - MIR SINE MIR -99 163 96 30 105 0 0 chr2 93081919 93082033 -160174550 + GC_rich Low_complexity Low_complexity 1 114 0 279 0 0 0 chr2 93082046 93082077 -160174506 + (TGG)n Simple_repeat Simple_repeat 3 33 0 21 36 0 0 chr2 93082195 93082223 -160174360 + GC_rich Low_complexity Low_complexity 1 28 0 180 256 0 0 chr2 93082505 93082544 -160174039 + MIR SINE MIR 111 149 -113 1571 140 55 0 chr2 93082567 93082824 -160173759 + AluJo SINE Alu 22 292 -20 1777 98 0 0 chr2 93082834 93083069 -160173514 + AluSq SINE Alu 1 235 -78 2363 67 0 3 chr2 93083076 93083373 -160173210 - AluY SINE Alu -15 296 1 2090 124 3 0 chr2 93083577 93083868 -160172715 + AluJo SINE Alu 2 293 -19 1197 124 5 11 chr2 93083868 93084045 -160172538 + AluSg/x SINE Alu 134 311 -1 2524 49 0 3 chr2 93084095 93084401 -160172182 + AluY SINE Alu 1 305 -6 887 142 13 19 chr2 93084566 93084721 -160171862 - FRAM SINE Alu -16 160 7 404 120 0 33 chr2 93084994 93085086 -160171497 + (GGA)n Simple_repeat Simple_repeat 1 89 0 818 171 0 0 chr2 93087343 93087472 -160169111 - FLAM_C SINE Alu -4 129 1 23 0 0 0 chr2 93087815 93087838 -160168745 + GC_rich Low_complexity Low_complexity 1 23 0 1859 127 32 0 chr2 93088046 93088329 -160168254 - AluJo SINE Alu -16 296 5 2406 46 0 0 chr2 93088343 93088654 -160167929 - AluY SINE Alu 0 311 1 327 162 29 0 chr2 93088765 93088833 -160167750 - L1MB7 LINE L1 -1 6183 6114 1756 151 35 0 chr2 93088835 93089120 -160167463 + AluJo SINE Alu 1 295 -17 2082 121 3 0 chr2 93089129 93089427 -160167156 + AluY SINE Alu 5 303 -8 1617 253 55 29 chr2 93089432 93089550 -160167033 - L1MB7 LINE L1 -160 6024 5911 2097 122 13 0 chr2 93089550 93089854 -160166729 + AluSx SINE Alu 1 308 -4 1617 253 55 29 chr2 93089854 93090261 -160166322 - L1MB7 LINE L1 -273 5911 5485 2509 49 0 7 chr2 93090264 93090572 -160166011 - AluY SINE Alu -5 306 1 970 105 0 0 chr2 93090575 93090708 -160165875 - AluSq/x SINE Alu -180 133 1 237 164 16 0 chr2 93090718 93090779 -160165804 - L1MB7 LINE L1 -701 5479 5418 355 354 87 5 chr2 93090870 93091065 -160165518 - MIR SINE MIR -5 257 47 1149 149 0 0 chr2 93091484 93091659 -160164924 - AluSg/x SINE Alu -1 311 137 288 0 0 0 chr2 93091660 93091692 -160164891 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 2128 90 0 0 chr2 93091693 93091981 -160164602 - AluSc SINE Alu -21 288 1 194 337 0 11 chr2 93092631 93092723 -160163860 - L2 LINE L2 -222 3050 2960 1041 135 49 5 chr2 93092762 93092947 -160163636 + MER30 DNA MER1_type 4 196 -34 802 114 0 61 chr2 93094179 93094311 -160162272 - AluJb SINE Alu -183 129 6 267 93 0 0 chr2 93094330 93094373 -160162210 + (TG)n Simple_repeat Simple_repeat 2 44 0 627 240 140 14 chr2 93095409 93095567 -160161016 + MLT1C LTR MaLR 6 143 -324 1804 135 32 3 chr2 93095567 93095849 -160160734 + AluJo SINE Alu 17 306 -6 2365 80 3 6 chr2 93095849 93096161 -160160422 + AluSx SINE Alu 1 311 -1 627 240 140 14 chr2 93096161 93096293 -160160290 + MLT1C LTR MaLR 142 334 -133 253 282 77 0 chr2 93096699 93096777 -160159806 - L2 LINE L2 -18 3254 3171 225 65 0 0 chr2 93096890 93096921 -160159662 + (TG)n Simple_repeat Simple_repeat 1 31 0 1283 140 37 9 chr2 93097204 93097418 -160159165 - AluJo SINE Alu -26 286 67 221 247 112 11 chr2 93097759 93097848 -160158735 + MIR SINE MIR 58 155 -107 1297 88 0 16 chr2 93098783 93098815 -160157768 - AluSg/x SINE Alu 0 310 279 228 35 0 0 chr2 93098815 93098844 -160157739 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 1297 88 0 16 chr2 93098844 93098993 -160157590 - AluSg/x SINE Alu -31 279 132 2325 70 6 10 chr2 93098993 93099305 -160157278 - AluSx SINE Alu -1 311 1 1694 179 6 10 chr2 93099346 93099659 -160156924 - AluJb SINE Alu 0 312 1 192 161 0 0 chr2 93100007 93100038 -160156545 + MIR SINE MIR 115 145 -63 227 286 16 0 chr2 93100774 93100837 -160155746 + L2 LINE L2 3229 3292 -21 2436 63 3 25 chr2 93101265 93101581 -160155002 - AluSx SINE Alu -3 309 1 535 121 0 0 chr2 93102091 93102174 -160154409 - AluJ/FLAM SINE Alu -229 83 1 2167 100 20 0 chr2 93102234 93102533 -160154050 - AluSx SINE Alu -5 307 3 183 368 28 0 chr2 93103129 93103235 -160153348 - L2 LINE L2 -506 2808 2700 2210 109 3 0 chr2 93103382 93103686 -160152897 - AluSp SINE Alu -8 305 1 886 114 0 38 chr2 93103690 93103821 -160152762 - FLAM_C SINE Alu -7 126 1 2040 115 20 7 chr2 93103839 93104135 -160152448 + AluSg SINE Alu 1 300 -10 2003 123 0 17 chr2 93104418 93104719 -160151864 + AluSx SINE Alu 1 296 -16 2038 133 16 7 chr2 93104727 93105036 -160151547 + AluJb SINE Alu 1 312 0 1494 173 75 0 chr2 93106356 93106622 -160149961 + AluJo SINE Alu 1 286 -26 181 309 91 0 chr2 93107028 93107083 -160149500 - L2 LINE L2 -5 3308 3249 180 173 58 19 chr2 93108194 93108246 -160148337 - MIR3 SINE MIR -54 154 101 413 250 56 5 chr2 93108394 93108579 -160148004 - MLT1C LTR MaLR -15 452 277 343 233 0 11 chr2 93108609 93108699 -160147884 - MLT1C LTR MaLR -326 141 53 233 295 137 32 chr2 93108878 93108973 -160147610 - L2 LINE L2 -5 3308 3204 196 204 0 0 chr2 93109339 93109383 -160147200 - MIR SINE MIR -61 147 104 196 212 0 0 chr2 93109953 93109986 -160146597 + MIR SINE MIR 113 145 -117 1795 138 3 13 chr2 93110131 93110429 -160146154 + AluJo SINE Alu 9 303 -9 1796 115 3 35 chr2 93110429 93110714 -160145869 + AluSx SINE Alu 36 312 0 2284 72 23 7 chr2 93110716 93111022 -160145561 + AluY SINE Alu 1 311 0 843 239 54 57 chr2 93111111 93111187 -160145396 + MER7A DNA MER2_type 12 87 -2951 2345 29 11 0 chr2 93111187 93111467 -160145116 + AluY SINE Alu 12 294 -17 843 239 54 57 chr2 93111467 93111704 -160144879 + MER7A DNA MER2_type 87 322 -24 529 273 72 5 chr2 93111722 93111833 -160144750 + MLT1D LTR MaLR 262 364 -141 1691 157 20 10 chr2 93111833 93112127 -160144456 - AluJb SINE Alu -7 305 9 529 273 72 5 chr2 93112127 93112209 -160144374 + MLT1D LTR MaLR 364 468 -37 217 213 0 0 chr2 93113240 93113287 -160143296 + MIR SINE MIR 117 163 -99 2255 98 0 0 chr2 93114201 93114496 -160142087 + AluSx SINE Alu 1 295 -17 2347 80 0 0 chr2 93115078 93115379 -160141204 - AluSq SINE Alu -12 301 1 450 263 38 6 chr2 93116629 93116789 -160139794 + MER20 DNA MER1_type 1 165 -54 187 303 0 13 chr2 93117659 93117735 -160138848 + MIR SINE MIR 44 118 -90 259 68 0 0 chr2 93118065 93118109 -160138474 + FLAM_A SINE Alu 89 132 -1 1323 201 6 100 chr2 93118112 93118274 -160138309 + AluJb SINE Alu 2 119 -183 2290 109 0 0 chr2 93118274 93118576 -160138007 + AluSx SINE Alu 1 302 -10 1323 201 6 100 chr2 93118576 93118742 -160137841 + AluJb SINE Alu 119 299 -3 2479 61 6 0 chr2 93118742 93119053 -160137530 + AluSp SINE Alu 1 313 0 2107 117 3 3 chr2 93119540 93119848 -160136735 + AluSq SINE Alu 1 308 -5 1954 148 30 0 chr2 93119850 93120147 -160136436 + AluJo SINE Alu 1 306 -6 291 256 192 8 chr2 93120162 93120287 -160136296 - L2 LINE L2 0 3272 3125 2435 79 0 0 chr2 93120327 93120632 -160135951 + AluSx SINE Alu 1 305 -7 2475 63 3 0 chr2 93120643 93120946 -160135637 + AluY SINE Alu 1 304 -7 848 193 6 36 chr2 93121352 93121518 -160135065 - AluJo SINE Alu -151 161 1 633 200 0 57 chr2 93121518 93121658 -160134925 + AluJo/FRAM SINE Alu 162 293 -19 22 0 0 0 chr2 93121669 93121691 -160134892 + AT_rich Low_complexity Low_complexity 1 22 0 731 91 9 0 chr2 93121695 93121805 -160134778 - L1MA3 LINE L1 0 6305 6195 1793 164 0 0 chr2 93121819 93122099 -160134484 + AluJb SINE Alu 1 280 -32 376 216 0 112 chr2 93122111 93122236 -160134347 + L1MC4 LINE L1 6615 6725 -1317 329 308 0 69 chr2 93122159 93122251 -160134332 - L1MC4 LINE L1 -1323 6719 6637 * 2185 89 0 20 chr2 93122251 93122553 -160134030 - AluSx SINE Alu -12 300 5 329 308 0 69 chr2 93122553 93122590 -160133993 - L1MC4 LINE L1 -1405 6637 6599 2052 153 0 0 chr2 93122598 93122906 -160133677 + AluSg SINE Alu 2 309 -1 630 141 124 25 chr2 93122930 93123051 -160133532 + AluJo SINE Alu 2 134 -178 1835 98 124 0 chr2 93123070 93123336 -160133247 - AluSg SINE Alu 0 300 2 1588 132 4 51 chr2 93123763 93123895 -160132688 + AluJo SINE Alu 14 128 -184 2029 117 7 13 chr2 93123895 93124202 -160132381 + AluSx SINE Alu 2 306 -6 1588 132 4 51 chr2 93124202 93124342 -160132241 + AluJo SINE Alu 128 273 -39 180 111 0 0 chr2 93124498 93124525 -160132058 + (CGG)n Simple_repeat Simple_repeat 2 28 0 288 77 0 0 chr2 93124787 93124826 -160131757 + (TA)n Simple_repeat Simple_repeat 2 40 0 321 100 0 0 chr2 93125346 93125396 -160131187 + (A)n Simple_repeat Simple_repeat 1 50 0 2316 73 0 16 chr2 93125669 93125972 -160130611 - AluSq SINE Alu -9 304 7 27 29 0 0 chr2 93128159 93128193 -160128390 + AT_rich Low_complexity Low_complexity 1 34 0 240 149 0 0 chr2 93128295 93128342 -160128241 + (A)n Simple_repeat Simple_repeat 1 47 0 2259 76 10 3 chr2 93128675 93128978 -160127605 + AluSq SINE Alu 1 305 -8 682 269 53 0 chr2 93128979 93129187 -160127396 + MER20 DNA MER1_type 1 219 0 547 253 62 0 chr2 93129422 93129616 -160126967 + MER20 DNA MER1_type 1 206 -13 242 253 55 11 chr2 93129827 93129918 -160126665 + L2 LINE L2 2913 3007 -265 338 163 19 36 chr2 93130317 93130437 -160126146 + AluJo SINE Alu 1 122 -180 21 0 0 0 chr2 93130437 93130458 -160126125 + AT_rich Low_complexity Low_complexity 1 21 0 338 163 19 36 chr2 93130458 93130529 -160126054 + AluJo SINE Alu 122 278 -24 2150 121 0 0 chr2 93130529 93130835 -160125748 - AluSg SINE Alu -4 306 1 1646 138 0 23 chr2 93130837 93131097 -160125486 - AluSx SINE Alu -14 298 45 1991 135 0 0 chr2 93131142 93131430 -160125153 + AluSx SINE Alu 1 288 -24 185 32 0 65 chr2 93131431 93131439 -160125144 + (TTAA)n Simple_repeat Simple_repeat 4 11 -21 2261 66 3 3 chr2 93131439 93131726 -160124857 + AluY SINE Alu 1 287 -24 185 32 0 65 chr2 93131726 93131748 -160124835 + (TTAA)n Simple_repeat Simple_repeat 11 32 0 201 243 0 109 chr2 93132419 93132621 -160123962 + C-rich Low_complexity Low_complexity 1 180 0 1604 166 35 10 chr2 93133458 93133748 -160122835 + AluJo SINE Alu 1 297 -15 2170 93 6 19 chr2 93133752 93134064 -160122519 + AluSg SINE Alu 3 310 0 2102 99 0 40 chr2 93134066 93134388 -160122195 + AluSx SINE Alu 1 309 -3 809 164 8 15 chr2 93134397 93134531 -160122052 + AluJo SINE Alu 1 133 -169 623 174 70 9 chr2 93134531 93134641 -160121942 + AluJo SINE Alu 123 239 -73 1288 107 48 0 chr2 93134642 93134829 -160121754 - AluSc SINE Alu -113 196 1 22 35 0 0 chr2 93134830 93134859 -160121724 + AT_rich Low_complexity Low_complexity 1 29 0 2218 96 7 0 chr2 93134865 93135168 -160121415 + AluSx SINE Alu 1 305 -7 593 183 92 17 chr2 93135725 93135845 -160120738 + FLAM_C SINE Alu 1 129 -14 1619 79 150 0 chr2 93135873 93136126 -160120457 - AluSx SINE Alu -21 291 1 898 137 0 0 chr2 93136322 93136461 -160120122 + FLAM_C SINE Alu 1 139 -4 2033 116 0 13 chr2 93137733 93138034 -160118549 - AluSx SINE Alu -15 297 1 187 133 0 0 chr2 93138039 93138069 -160118514 - MIR SINE MIR -116 146 117 1597 126 12 8 chr2 93138878 93139133 -160117450 - AluSq SINE Alu -57 256 1 298 315 46 8 chr2 93139258 93139388 -160117195 - MER58A DNA MER1_type 0 147 13 1848 167 0 0 chr2 93139629 93139916 -160116667 + AluSx SINE Alu 5 291 -21 608 182 116 8 chr2 93139991 93140112 -160116471 - AluJo SINE Alu -176 136 3 2124 107 17 0 chr2 93140394 93140694 -160115889 - AluSx SINE Alu -7 305 1 405 291 100 22 chr2 93141279 93141550 -160115033 - MLT1C LTR MaLR -174 293 2 277 202 58 46 chr2 93143975 93144148 -160112435 + (GGCTG)n Simple_repeat Simple_repeat 4 178 0 196 115 0 39 chr2 93144256 93144308 -160112275 + (CGGGG)n Simple_repeat Simple_repeat 5 54 0 242 203 0 98 chr2 93144336 93144499 -160112084 + (CGGGG)n Simple_repeat Simple_repeat 5 151 0 420 267 47 97 chr2 93149258 93149420 -160107163 + L1MB3 LINE L1 5429 5575 -596 2295 93 0 0 chr2 93149420 93149731 -160106852 - AluSx SINE Alu -1 311 1 420 267 47 97 chr2 93149731 93149826 -160106757 + L1MB3 LINE L1 5575 5673 -498 1640 222 26 52 chr2 93149897 93149947 -160106636 + L1MB3 LINE L1 5689 5739 -444 2029 108 30 3 chr2 93149947 93150243 -160106340 + AluSx SINE Alu 1 304 -8 1640 222 26 52 chr2 93150243 93150349 -160106234 + L1MB3 LINE L1 5739 5846 -337 1621 164 20 10 chr2 93150349 93150641 -160105942 + AluJo SINE Alu 9 303 -9 1640 222 26 52 chr2 93150641 93150987 -160105596 + L1MB3 LINE L1 5846 6179 -4 198 308 67 19 chr2 93151015 93151119 -160105464 - MIR SINE MIR -72 190 82 351 0 0 0 chr2 93151449 93151488 -160105095 + (TG)n Simple_repeat Simple_repeat 1 39 0 2482 62 0 0 chr2 93152364 93152673 -160103910 - AluSg SINE Alu 0 310 2 180 135 0 0 chr2 93153018 93153055 -160103528 + (CTGGGG)n Simple_repeat Simple_repeat 1 37 0 40 59 0 0 chr2 93153129 93153197 -160103386 + GC_rich Low_complexity Low_complexity 1 68 0 21 36 0 0 chr2 93153228 93153256 -160103327 + GC_rich Low_complexity Low_complexity 1 28 0 1301 117 0 0 chr2 93154610 93154789 -160101794 + AluJo SINE Alu 1 179 -133 701 69 0 11 chr2 93154801 93155048 -160101535 + AluY SINE Alu 1 300 -11 209 375 65 35 chr2 93155199 93155538 -160101045 - L2 LINE L2 -86 3186 2838 1925 124 14 7 chr2 93156368 93156659 -160099924 + AluJb SINE Alu 1 293 -19 21 36 0 0 chr2 93158246 93158274 -160098309 + AT_rich Low_complexity Low_complexity 1 28 0 2183 90 3 16 chr2 93158281 93158592 -160097991 + AluSx SINE Alu 1 307 -5 790 136 0 8 chr2 93158595 93158713 -160097870 - AluJo/FLAM SINE Alu -195 117 1 2062 96 24 7 chr2 93158715 93159007 -160097576 - AluSg SINE Alu -13 297 1 901 156 57 21 chr2 93159011 93159203 -160097380 - AluSp SINE Alu -12 301 103 406 224 36 61 chr2 93159947 93160112 -160096471 + MER20 DNA MER1_type 1 161 -58 210 37 0 0 chr2 93160877 93160904 -160095679 + (TGGGGG)n Simple_repeat Simple_repeat 4 30 0 22 35 0 0 chr2 93161359 93161388 -160095195 + GC_rich Low_complexity Low_complexity 1 29 0 180 0 0 0 chr2 93161750 93161770 -160094813 + (CAG)n Simple_repeat Simple_repeat 2 21 0 244 197 28 28 chr2 93164065 93164136 -160092447 + (CGGGG)n Simple_repeat Simple_repeat 1 71 0 210 71 0 0 chr2 93165480 93165508 -160091075 + (CGGGGG)n Simple_repeat Simple_repeat 4 31 0 450 190 175 0 chr2 93167812 93167949 -160088634 + MER20 DNA MER1_type 1 161 -58 186 323 52 52 chr2 93169175 93169271 -160087312 - MIR SINE MIR -107 155 60 2102 119 0 7 chr2 93171267 93171570 -160085013 + AluSx SINE Alu 1 301 -11 188 276 52 35 chr2 93172707 93172765 -160083818 + MIR SINE MIR 66 124 -84 39 38 0 0 chr2 93173480 93173533 -160083050 + GC_rich Low_complexity Low_complexity 1 53 0 1009 0 0 0 chr2 93174085 93174192 -160082391 + U6 snRNA snRNA 1 107 0 2064 109 10 0 chr2 93174452 93174754 -160081829 - AluSx SINE Alu -4 308 4 2178 102 0 7 chr2 93174765 93175068 -160081515 - AluSg1 SINE Alu -8 301 1 934 213 0 21 chr2 93175074 93175262 -160081321 + AluJo SINE Alu 120 303 -9 1144 227 4 4 chr2 93175297 93175544 -160081039 - MER58 DNA MER1_type -2155 265 19 483 214 8 0 chr2 93175553 93175684 -160080899 - Charlie5 DNA MER1_type -31 2581 2450 2024 141 0 3 chr2 93175687 93175985 -160080598 + AluJo SINE Alu 1 297 -15 2406 50 3 3 chr2 93175987 93176289 -160080294 + AluY SINE Alu 1 302 -9 343 287 32 38 chr2 93176300 93176457 -160080126 - Charlie5 DNA MER1_type -190 2422 2267 1797 126 60 0 chr2 93176461 93176730 -160079853 + AluJo SINE Alu 1 285 -27 290 286 11 0 chr2 93176730 93176821 -160079762 + (TATATG)n Simple_repeat Simple_repeat 5 96 0 1215 131 0 6 chr2 93176878 93177054 -160079529 + AluSx SINE Alu 3 177 -135 413 262 20 27 chr2 93177128 93177160 -160079423 - MER3 DNA MER1_type 6 168 137 2313 81 10 0 chr2 93177160 93177467 -160079116 + AluY SINE Alu 2 311 0 413 262 20 27 chr2 93177467 93177583 -160079000 - MER3 DNA MER1_type -25 137 21 942 91 0 0 chr2 93177623 93177744 -160078839 + AluSq/x SINE Alu 1 121 -192 495 0 0 0 chr2 93177744 93177799 -160078784 + (TAAAA)n Simple_repeat Simple_repeat 2 56 0 23 0 0 0 chr2 93178113 93178136 -160078447 + AT_rich Low_complexity Low_complexity 1 23 0 2268 92 0 10 chr2 93178140 93178444 -160078139 - AluSx SINE Alu 0 312 12 857 201 0 35 chr2 93178461 93178630 -160077953 - FRAM SINE Alu -2 164 2 279 292 11 11 chr2 93178643 93178732 -160077851 + L2 LINE L2 2976 3064 -208 216 111 0 0 chr2 93179172 93179208 -160077375 + (TCCCG)n Simple_repeat Simple_repeat 1 36 0 843 129 0 8 chr2 93179956 93180088 -160076495 + FLAM_C SINE Alu 1 131 -2 200 338 0 0 chr2 93180679 93180756 -160075827 - MIR SINE MIR -138 124 48 215 172 17 35 chr2 93181256 93181314 -160075269 + G-rich Low_complexity Low_complexity 4 60 0 627 79 0 71 chr2 93383140 93383527 -159873056 + (GCTG)n Simple_repeat Simple_repeat 1 359 0 534 111 0 68 chr2 93383541 93384065 -159872518 + (GCTG)n Simple_repeat Simple_repeat 1 488 0 777 69 0 70 chr2 93384077 93384952 -159871631 + (GCTG)n Simple_repeat Simple_repeat 1 813 0 879 79 0 53 chr2 93384979 93385367 -159871216 + (GCTG)n Simple_repeat Simple_repeat 1 367 0 358 197 15 0 chr2 93387047 93387113 -159869470 - MIR3 SINE MIR -47 161 95 1383 162 132 0 chr2 93387590 93387856 -159868727 + AluJb SINE Alu 2 302 0 1175 148 0 31 chr2 93387978 93388174 -159868409 + MER30B DNA MER1_type 1 190 0 713 84 0 68 chr2 93388540 93388990 -159867593 + (CAGC)n Simple_repeat Simple_repeat 1 419 0 833 81 0 66 chr2 93389022 93389910 -159866673 + (CAGC)n Simple_repeat Simple_repeat 1 829 0 320 65 114 16 chr2 93389931 93390054 -159866529 + (CAAGC)n Simple_repeat Simple_repeat 3 137 0 * 671 78 0 68 chr2 93390032 93390223 -159866360 + (CAGC)n Simple_repeat Simple_repeat 3 180 0 224 204 111 0 chr2 93390970 93391024 -159865559 - SUBTEL_sa Satellite Satellite -71 103 44 238 315 82 0 chr2 93391037 93391183 -159865400 - L1MEc LINE L1 -3385 3155 2998 1435 213 22 0 chr2 93391209 93391477 -159865106 - AluJo SINE Alu -38 274 1 1214 258 52 60 chr2 93391561 93392065 -159864518 - LTR53 LTR ERVL 0 519 20 639 236 87 87 chr2 93392076 93392929 -159863654 - L1MEc LINE L1 -3753 2787 1883 927 253 163 25 chr2 93393192 93393635 -159862948 + L1MB5 LINE L1 5662 6165 -9 342 368 45 0 chr2 93393902 93394057 -159862526 + L1MC/D LINE L1 5313 5474 -768 1254 243 4 4 chr2 93394479 93394759 -159861824 + MLT1A1 LTR MaLR 86 365 0 498 313 26 46 chr2 93394973 93395168 -159861415 + L1MEc LINE L1 1223 1413 -4983 700 273 48 19 chr2 93395208 93395585 -159860998 + L1MEc LINE L1 2319 2706 -3509 305 221 26 32 chr2 93395689 93395843 -159860740 + T-rich Low_complexity Low_complexity 2 154 0 * 562 217 4 28 chr2 93395811 93396103 -159860480 + CT-rich Low_complexity Low_complexity 1 284 0 331 311 177 7 chr2 93396103 93396402 -159860181 - HAL1 LINE L1 -1206 1301 952 969 249 46 88 chr2 93396464 93396742 -159859841 + MLT1D LTR MaLR 5 252 -253 2109 129 7 0 chr2 93396742 93397037 -159859546 + AluY SINE Alu 8 304 -7 969 249 46 88 chr2 93397037 93397279 -159859304 + MLT1D LTR MaLR 252 503 -2 1443 234 3 3 chr2 93398272 93398571 -159858012 + AluJb SINE Alu 11 309 -3 1533 221 51 2 chr2 93399749 93400142 -159856441 + MER54A LTR ERVL 1 412 -489 2054 119 77 15 chr2 93400151 93400488 -159856095 + THE1B LTR MaLR 7 364 0 1297 243 56 10 chr2 93400526 93400937 -159855646 + MER54A LTR ERVL 472 901 0 304 299 95 51 chr2 93401566 93401883 -159854700 - L1 LINE L1 -1320 4826 4491 181 196 43 11 chr2 93401936 93402028 -159854555 + (TA)n Simple_repeat Simple_repeat 1 95 0 21 0 0 0 chr2 93402222 93402243 -159854340 + AT_rich Low_complexity Low_complexity 1 21 0 201 39 0 0 chr2 93402595 93402621 -159853962 + (T)n Simple_repeat Simple_repeat 1 26 0 21 0 0 0 chr2 93402657 93402678 -159853905 + AT_rich Low_complexity Low_complexity 1 21 0 2194 188 98 11 chr2 93402815 93403357 -159853226 + LTR49 LTR ERV1 1 589 -6 1745 179 51 23 chr2 93403547 93403977 -159852606 + LTR56 LTR ERV1 4 445 0 512 229 142 11 chr2 93404117 93404300 -159852283 - MER20 DNA MER1_type -3 216 10 319 319 50 17 chr2 93404416 93404535 -159852048 - L1 LINE L1 -3324 2822 2700 23 33 0 0 chr2 93404558 93404588 -159851995 + AT_rich Low_complexity Low_complexity 1 30 0 300 299 115 61 chr2 93404764 93405139 -159851444 + L1 LINE L1 4890 5284 -862 1436 190 84 55 chr2 93405290 93405322 -159851261 + LTR49 LTR ERV1 1 31 -564 1942 148 4 0 chr2 93405322 93405600 -159850983 - AluSq SINE Alu -21 292 14 1436 190 84 55 chr2 93405600 93405982 -159850601 + LTR49 LTR ERV1 31 427 -168 231 183 17 17 chr2 93406016 93406076 -159850507 + (TA)n Simple_repeat Simple_repeat 1 60 0 240 198 94 42 chr2 93406076 93406172 -159850411 + LTR48 LTR ERV1 645 745 -42 2175 88 22 59 chr2 93407635 93407777 -159848806 + AluSg SINE Alu 1 147 -163 2289 103 0 22 chr2 93407777 93408088 -159848495 + AluY SINE Alu 1 304 -7 2175 88 22 59 chr2 93408088 93408265 -159848318 + AluSg SINE Alu 147 308 -2 660 192 0 0 chr2 93408352 93408456 -159848127 + FLAM_C SINE Alu 2 105 -38 2962 262 34 6 chr2 93408457 93409275 -159847308 - ERVL LTR ERVL -3750 2014 1174 358 148 20 0 chr2 93409282 93409383 -159847200 + (CCAA)n Simple_repeat Simple_repeat 1 103 0 844 239 0 0 chr2 93409385 93409573 -159847010 - ERVL LTR ERVL -4575 1189 1002 264 244 23 107 chr2 93409584 93409603 -159846980 - MLT2C1 LTR ERVL -41 356 337 4925 171 23 29 chr2 93409603 93410530 -159846053 - MER49 LTR ERV1 -2 921 1 264 244 23 107 chr2 93410530 93410641 -159845942 - MLT2C1 LTR ERVL -60 337 237 352 265 29 0 chr2 93410675 93410777 -159845806 - MLT2C1 LTR ERVL -291 106 2 252 358 114 0 chr2 93411093 93411216 -159845367 - MIR SINE MIR -78 184 48 283 326 30 15 chr2 93412001 93412133 -159844450 + MIR SINE MIR 3 136 -126 1148 182 62 4 chr2 93412426 93412668 -159843915 + MLT1D LTR MaLR 250 505 0 267 103 0 0 chr2 93412956 93412995 -159843588 + (CATA)n Simple_repeat Simple_repeat 2 40 0 191 303 101 0 chr2 93413807 93413896 -159842687 - L2 LINE L2 -215 3057 2960 376 244 75 44 chr2 93414436 93414596 -159841987 + MIR3 SINE MIR 3 167 -41 2373 106 0 3 chr2 93415374 93415685 -159840898 + AluSq SINE Alu 1 310 -3 756 282 18 22 chr2 93416592 93416865 -159839718 - MER34C LTR ERV1 -155 430 159 5464 97 5 1 chr2 93417663 93418424 -159838159 + L1PA8 LINE L1 5409 6172 0 358 322 85 79 chr2 93418866 93419208 -159837375 - L1M4 LINE L1 -2683 3463 3120 266 322 8 0 chr2 93419286 93419407 -159837176 - L1M4 LINE L1 -3135 3011 2890 448 319 101 58 chr2 93419451 93419588 -159836995 - L1M4 LINE L1 -3128 3018 2888 1977 158 0 3 chr2 93419588 93419886 -159836697 - AluSx SINE Alu -15 297 1 448 319 101 58 chr2 93419886 93420112 -159836471 - L1M4 LINE L1 -3258 2888 2634 195 47 23 47 chr2 93420112 93420155 -159836428 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 448 319 101 58 chr2 93420155 93420188 -159836395 - L1M4 LINE L1 -3512 2634 2604 755 232 6 0 chr2 93420753 93420921 -159835662 + L1MB3 LINE L1 5659 5827 -356 871 133 16 0 chr2 93420921 93421049 -159835534 - BC200 scRNA scRNA -57 143 14 1148 215 106 0 chr2 93421052 93421336 -159835247 + L1MB3 LINE L1 5798 6111 -72 186 43 0 0 chr2 93422614 93422637 -159833946 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 997 232 43 0 chr2 93422733 93423013 -159833570 - MER47A DNA MER2_type -66 300 9 234 278 122 11 chr2 93423013 93423103 -159833480 + MIR SINE MIR 44 143 -119 224 270 0 9 chr2 93423175 93423286 -159833297 + (TATG)n Simple_repeat Simple_repeat 1 110 0 2213 108 0 41 chr2 93424503 93424817 -159831766 - AluSg SINE Alu -9 301 1 373 305 23 15 chr2 93425116 93425247 -159831336 + (CACG)n Simple_repeat Simple_repeat 4 135 0 191 270 16 16 chr2 93425394 93425457 -159831126 - L2 LINE L2 -6 3266 3204 357 270 110 16 chr2 93426205 93426375 -159830208 - MIR SINE MIR -71 137 1 724 252 101 81 chr2 93428789 93429305 -159827278 - L1ME3A LINE L1 0 6170 5645 292 245 89 24 chr2 93429336 93429449 -159827134 - L1ME3A LINE L1 -494 5676 5559 481 258 84 0 chr2 93429484 93429662 -159826921 - L1MC4a LINE L1 -1942 5866 5674 272 293 57 0 chr2 93429685 93429842 -159826741 - L1ME4a LINE L1 0 6121 5956 2018 150 3 13 chr2 93429850 93430163 -159826420 - AluJb SINE Alu -2 310 1 1268 170 0 24 chr2 93431255 93431467 -159825116 - AluJo SINE Alu -21 291 85 828 150 8 0 chr2 93432629 93432756 -159823827 - FLAM_A SINE Alu -5 128 1 23 0 0 0 chr2 93433333 93433356 -159823227 + AT_rich Low_complexity Low_complexity 1 23 0 714 129 313 0 chr2 93433686 93433833 -159822750 + MER46A DNA MER2_type 44 236 0 322 214 137 51 chr2 93433838 93433955 -159822628 + MIR SINE MIR 124 250 -12 5288 117 42 15 chr2 93434479 93435369 -159821214 + HSMAR2 DNA Mariner 93 1006 -296 1454 144 0 9 chr2 93435495 93435724 -159820859 + AluSg/x SINE Alu 80 306 -4 1327 139 0 10 chr2 93435724 93435961 -159820622 + AluSg/x SINE Alu 81 310 0 1309 157 0 9 chr2 93435961 93436171 -159820412 + AluSg/x SINE Alu 86 293 -19 366 70 0 0 chr2 93436171 93436228 -159820355 + Alu SINE Alu 244 300 0 1395 139 0 14 chr2 93436230 93436445 -159820138 + AluSg/x SINE Alu 80 291 -19 409 79 0 0 chr2 93436445 93436508 -159820075 + Alu SINE Alu 245 307 -4 1428 132 0 9 chr2 93436508 93436721 -159819862 + AluSg/x SINE Alu 80 290 -20 352 91 0 0 chr2 93436721 93436776 -159819807 + Alu SINE Alu 244 298 -2 1455 123 0 9 chr2 93436783 93436994 -159819589 + AluSg/x SINE Alu 80 288 -22 356 89 0 0 chr2 93436994 93437050 -159819533 + Alu SINE Alu 245 300 -1 1113 168 43 10 chr2 93437050 93437258 -159819325 + AluSg/x SINE Alu 82 296 -16 272 157 0 0 chr2 93437258 93437309 -159819274 + Alu SINE Alu 248 298 -3 1375 148 0 9 chr2 93437309 93437538 -159819045 + AluSg/x SINE Alu 82 308 -4 1038 163 0 11 chr2 93437539 93437717 -159818866 + AluSg/x SINE Alu 84 259 -53 914 69 0 56 chr2 93437724 93438098 -159818485 + (CAGC)n Simple_repeat Simple_repeat 2 354 0 197 95 0 63 chr2 93438118 93438181 -159818402 + (CAGC)n Simple_repeat Simple_repeat 2 60 0 278 232 0 60 chr2 93438200 93438351 -159818232 + (CAGG)n Simple_repeat Simple_repeat 2 143 0 246 75 83 53 chr2 93438462 93438595 -159817988 + (CAAGC)n Simple_repeat Simple_repeat 3 139 0 306 281 104 76 chr2 93438595 93438990 -159817593 + L1M2 LINE L1 1019 1424 -5425 1389 152 0 5 chr2 93439041 93439258 -159817325 + AluSg/x SINE Alu 84 299 -11 * 1442 136 0 9 chr2 93439257 93439478 -159817105 + AluSg/x SINE Alu 82 300 -12 1383 129 0 10 chr2 93439479 93439688 -159816895 + AluSg/x SINE Alu 80 286 -24 367 88 0 0 chr2 93439693 93439750 -159816833 + Alu SINE Alu 244 300 0 1391 130 0 27 chr2 93439756 93439812 -159816771 + AluSg/x SINE Alu 84 140 -172 2209 108 0 0 chr2 93439812 93440107 -159816476 + AluSc SINE Alu 1 295 -14 1391 130 0 27 chr2 93440107 93440273 -159816310 + AluSg/x SINE Alu 140 300 -12 1310 171 0 5 chr2 93440272 93440488 -159816095 + AluSg/x SINE Alu 82 296 -16 * 305 130 0 0 chr2 93440488 93440542 -159816041 + Alu SINE Alu 249 302 0 1274 170 0 13 chr2 93440558 93440788 -159815795 + AluSg/x SINE Alu 80 306 -4 1569 115 0 9 chr2 93440788 93441014 -159815569 + AluSg/x SINE Alu 80 303 -7 1331 151 0 9 chr2 93441014 93441233 -159815350 + AluSg/x SINE Alu 83 299 -13 1202 151 5 15 chr2 93441236 93441442 -159815141 + AluSg/x SINE Alu 89 292 -18 362 61 0 0 chr2 93441442 93441491 -159815092 + Alu SINE Alu 244 292 -8 1570 115 4 9 chr2 93441491 93441717 -159814866 + AluSg/x SINE Alu 82 306 -6 1407 136 0 14 chr2 93441717 93441931 -159814652 + AluSg/x SINE Alu 83 293 -19 311 125 0 0 chr2 93441931 93441987 -159814596 + Alu SINE Alu 246 301 -1 1439 129 0 9 chr2 93441987 93442204 -159814379 + AluSg/x SINE Alu 82 296 -16 1462 130 0 17 chr2 93442204 93442434 -159814149 + AluSg/x SINE Alu 80 305 -5 1235 148 44 10 chr2 93442434 93442637 -159813946 + AluSg/x SINE Alu 83 292 -20 234 0 0 0 chr2 93442671 93442697 -159813886 + (A)n Simple_repeat Simple_repeat 1 26 0 1489 126 5 9 chr2 93442698 93442921 -159813662 + AluSg/x SINE Alu 82 303 -7 1285 148 0 9 chr2 93442921 93443138 -159813445 + AluSg/x SINE Alu 81 295 -15 1511 130 4 9 chr2 93443138 93443369 -159813214 + AluSg/x SINE Alu 80 309 -1 1306 148 5 10 chr2 93443369 93443578 -159813005 + AluSg/x SINE Alu 83 290 -22 261 167 0 0 chr2 93443581 93443629 -159812954 + Alu SINE Alu 246 293 -9 1376 128 5 14 chr2 93443629 93443840 -159812743 + AluSg/x SINE Alu 82 290 -22 342 109 0 0 chr2 93443840 93443895 -159812688 + Alu SINE Alu 245 299 -2 408 39 0 0 chr2 93443898 93443950 -159812633 + AluSq/x SINE Alu 82 133 -180 694 106 67 28 chr2 93444083 93444686 -159811897 + (CATTT)n Simple_repeat Simple_repeat 1 627 0 249 194 86 21 chr2 93444690 93444783 -159811800 + (CATCT)n Simple_repeat Simple_repeat 5 103 0 612 112 85 16 chr2 93444783 93445299 -159811284 + (CATTT)n Simple_repeat Simple_repeat 1 551 0 1115 110 7 8 chr2 93445966 93447888 -159808695 + HSATII Satellite Satellite 1 1920 0 991 108 8 13 chr2 93447917 93448736 -159807847 + HSATII Satellite Satellite 1 814 -16 1032 106 0 0 chr2 93448768 93448938 -159807645 + HSATII Satellite Satellite 1 170 0 986 130 5 9 chr2 93448964 93449590 -159806993 + HSATII Satellite Satellite 1 623 -1 885 143 8 9 chr2 93449611 93450824 -159805759 + HSATII Satellite Satellite 1 1211 0 1022 108 18 9 chr2 93450847 93452058 -159804525 + HSATII Satellite Satellite 1 1222 -1 894 138 0 9 chr2 93452083 93452402 -159804181 + HSATII Satellite Satellite 1 316 0 1080 117 4 9 chr2 93452413 93454754 -159801829 + HSATII Satellite Satellite 1 2329 -42 990 117 18 11 chr2 93454766 93455578 -159801005 + HSATII Satellite Satellite 1 818 0 1028 119 9 9 chr2 93455604 93456849 -159799734 + HSATII Satellite Satellite 1 1245 -1 747 169 11 15 chr2 93456862 93457441 -159799142 + HSATII Satellite Satellite 1 576 0 1001 96 26 0 chr2 93457464 93457824 -159798759 + HSATII Satellite Satellite 1 369 -8 680 153 43 0 chr2 93457854 93458017 -159798566 + HSATII Satellite Satellite 1 170 0 683 108 0 23 chr2 93458043 93458173 -159798410 + HSATII Satellite Satellite 4 130 -40 1059 117 8 5 chr2 93458189 93458993 -159797590 + HSATII Satellite Satellite 1 806 -1 1098 110 2 8 chr2 93459023 93460603 -159795980 + HSATII Satellite Satellite 1 1571 0 972 112 5 13 chr2 93460637 93461327 -159795256 + HSATII Satellite Satellite 1 684 -1 494 144 0 18 chr2 93461350 93461461 -159795122 + HSATII Satellite Satellite 46 154 -16 1023 112 0 0 chr2 93461493 93461663 -159794920 + HSATII Satellite Satellite 1 170 0 1001 98 11 22 chr2 93461689 93461939 -159794644 + HSATII Satellite Satellite 1 247 -57 1094 118 10 8 chr2 93461950 93462715 -159793868 + HSATII Satellite Satellite 1 766 -1 671 191 8 0 chr2 93462728 93463107 -159793476 + HSATII Satellite Satellite 1 382 -50 988 104 26 16 chr2 93463122 93463641 -159792942 + HSATII Satellite Satellite 1 524 -8 767 135 43 0 chr2 93463671 93463834 -159792749 + HSATII Satellite Satellite 1 170 0 785 141 0 18 chr2 93463860 93464030 -159792553 + HSATII Satellite Satellite 4 170 0 1054 106 6 11 chr2 93464059 93464591 -159791992 + HSATII Satellite Satellite 1 529 -102 1122 109 3 14 chr2 93464606 93466562 -159790021 + HSATII Satellite Satellite 1 1935 -7 351 193 0 0 chr2 93466545 93466628 -159789955 + (CACTC)n Simple_repeat Simple_repeat 4 86 0 * 897 76 0 0 chr2 93466710 93466841 -159789742 + (CATTC)n Simple_repeat Simple_repeat 5 135 0 495 318 87 18 chr2 93467310 93467682 -159788901 - L1MEd LINE L1 -4867 1252 926 21 36 0 0 chr2 93467731 93467759 -159788824 + AT_rich Low_complexity Low_complexity 1 28 0 254 301 54 11 chr2 93467961 93468054 -159788529 - L1MEd LINE L1 -5493 626 530 22 0 0 0 chr2 93473194 93473216 -159783367 + AT_rich Low_complexity Low_complexity 1 22 0 1603 214 18 0 chr2 93473263 93473604 -159782979 + MER7A DNA MER2_type 2 346 0 530 271 122 35 chr2 93474253 93474508 -159782075 - MER77 LTR ERV1 -6 599 323 357 232 84 0 chr2 93474557 93474652 -159781931 + L1MB7 LINE L1 3053 3155 -2991 4005 260 67 15 chr2 93474686 93476473 -159780110 + L1MB7 LINE L1 3569 5445 -729 2165 225 34 7 chr2 93476489 93477080 -159779503 + L1MB7 LINE L1 5562 6168 -16 363 361 53 7 chr2 93477153 93477440 -159779143 - L2 LINE L2 -266 3047 2748 203 302 53 94 chr2 93477461 93477706 -159778877 + L3 LINE CR1 760 994 -583 2924 212 24 5 chr2 93479152 93479821 -159776762 - L1MB3 LINE L1 -1 6182 5501 25 65 0 0 chr2 93480347 93480393 -159776190 + AT_rich Low_complexity Low_complexity 1 46 0 22 0 0 0 chr2 93480506 93480528 -159776055 + AT_rich Low_complexity Low_complexity 1 22 0 294 29 0 0 chr2 93481978 93482013 -159774570 + (CA)n Simple_repeat Simple_repeat 2 36 0 37 23 0 0 chr2 93483660 93483704 -159772879 + AT_rich Low_complexity Low_complexity 1 44 0 1421 218 34 0 chr2 93483775 93484068 -159772515 + AluJb SINE Alu 1 303 -9 270 0 0 0 chr2 93484138 93484168 -159772415 + (A)n Simple_repeat Simple_repeat 1 30 0 308 316 129 22 chr2 93484762 93484987 -159771596 - L1ME3A LINE L1 -10 6160 5912 827 134 8 0 chr2 93485118 93485245 -159771338 + AluYb8 SINE Alu 12 139 -179 348 197 15 0 chr2 93487298 93487364 -159769219 - MIR3 SINE MIR -47 161 95 1299 183 129 11 chr2 93487838 93488101 -159768482 + AluJb SINE Alu 1 294 -8 1348 119 0 16 chr2 93488222 93488415 -159768168 + MER30B DNA MER1_type 1 190 0 769 165 0 0 chr2 93488779 93488894 -159767689 + FLAM_C SINE Alu 1 115 -18 26 0 0 0 chr2 93488896 93488922 -159767661 + AT_rich Low_complexity Low_complexity 1 26 0 235 187 99 66 chr2 93489383 93489474 -159767109 - MER103 DNA DNA -9 157 64 724 34 120 22 chr2 93489798 93490189 -159766394 + (AAATG)n Simple_repeat Simple_repeat 1 429 0 42452 65 3 0 chr2 93490189 93496343 -159760240 + L1PA4 LINE L1 2 6155 0 265 322 92 30 chr2 93496421 93496822 -159759761 + L1MDa LINE L1 1514 1980 -4601 21 0 0 0 chr2 93497043 93497064 -159759519 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr2 93497070 93497093 -159759490 + (T)n Simple_repeat Simple_repeat 1 23 0 256 202 36 36 chr2 93497227 93497311 -159759272 + L1MDa LINE L1 2655 2738 -3802 365 240 39 23 chr2 93497481 93497610 -159758973 + L1MEc LINE L1 55 185 -6211 254 312 78 61 chr2 93497819 93498640 -159757943 + L1MEc LINE L1 442 1276 -5120 755 159 30 0 chr2 93498706 93498838 -159757745 - MSTB1 LTR MaLR -296 136 1 21 82 0 0 chr2 93500075 93500124 -159756459 + AT_rich Low_complexity Low_complexity 1 49 0 250 239 43 11 chr2 93500257 93500349 -159756234 - LTR48 LTR ERV1 -48 739 645 199 148 16 16 chr2 93500349 93500410 -159756173 + (TA)n Simple_repeat Simple_repeat 1 61 0 1136 175 89 71 chr2 93500444 93500786 -159755797 - LTR49 LTR ERV1 -168 557 156 1907 135 7 7 chr2 93500786 93501060 -159755523 + AluSp SINE Alu 19 292 -21 1136 175 89 71 chr2 93501060 93501092 -159755491 - LTR49 LTR ERV1 -569 156 126 25 31 0 0 chr2 93501791 93501823 -159754760 + AT_rich Low_complexity Low_complexity 1 32 0 552 238 138 11 chr2 93502075 93502264 -159754319 + MER20 DNA MER1_type 4 216 -3 1894 169 51 29 chr2 93502382 93502834 -159753749 - LTR56 LTR ERV1 0 437 2 2418 182 98 11 chr2 93503023 93503566 -159753017 - LTR49 LTR ERV1 -5 590 1 25 31 0 0 chr2 93504156 93504188 -159752395 + AT_rich Low_complexity Low_complexity 1 32 0 333 260 27 20 chr2 93504339 93504489 -159752094 + (TA)n Simple_repeat Simple_repeat 2 152 0 26 0 0 0 chr2 93504604 93504630 -159751953 + AT_rich Low_complexity Low_complexity 1 26 0 1346 246 48 10 chr2 93505434 93505848 -159750735 - MER54A LTR ERVL 0 901 472 2201 121 74 15 chr2 93505886 93506224 -159750359 - THE1B LTR MaLR 0 364 7 1472 242 51 2 chr2 93506233 93506626 -159749957 - MER54A LTR ERVL -489 412 1 1455 230 0 3 chr2 93507821 93508121 -159748462 - AluJb SINE Alu -5 307 9 1292 264 43 72 chr2 93509112 93509355 -159747228 - MLT1D LTR MaLR -1 504 255 2206 124 7 0 chr2 93509355 93509662 -159746921 - AluY SINE Alu -2 309 1 1292 264 43 72 chr2 93509662 93509933 -159746650 - MLT1D LTR MaLR -250 255 5 651 217 18 10 chr2 93510024 93510524 -159746059 + GA-rich Low_complexity Low_complexity 1 504 0 227 186 58 0 chr2 93510551 93510637 -159745946 + GA-rich Low_complexity Low_complexity 3 93 0 870 249 52 29 chr2 93510733 93511114 -159745469 - L1MCa LINE L1 -3509 3432 3043 402 291 91 30 chr2 93511159 93511324 -159745259 - L1MCa LINE L1 -4999 1942 1768 1332 237 7 4 chr2 93511559 93511838 -159744745 - MLT1A1 LTR MaLR 0 365 86 288 263 153 27 chr2 93511922 93512222 -159744361 - L1MCa LINE L1 -6035 388 51 1247 247 155 25 chr2 93512683 93513129 -159743454 - L1MB5 LINE L1 -9 6165 5662 514 259 51 108 chr2 93513130 93513507 -159743076 + L1M4c LINE L1 1518 2012 -4551 2198 102 0 0 chr2 93513507 93513790 -159742793 + AluY SINE Alu 1 283 -28 514 259 51 108 chr2 93513790 93513921 -159742662 + L1M4c LINE L1 2012 2149 -4414 22 0 0 0 chr2 93514153 93514175 -159742408 + AT_rich Low_complexity Low_complexity 1 22 0 585 279 98 17 chr2 93514222 93514595 -159741988 + L1M4c LINE L1 2325 2694 -3688 1921 205 106 12 chr2 93514598 93515022 -159741561 + MLT1C LTR MaLR 4 467 0 300 291 107 31 chr2 93515076 93515272 -159741311 + L1M4 LINE L1 8 218 -6324 285 321 13 0 chr2 93515593 93515714 -159740869 + L1M4 LINE L1 611 929 -5717 1600 237 67 28 chr2 93515896 93516610 -159739973 + L1M4 LINE L1 820 1548 -4994 194 319 7 0 chr2 93516634 93516772 -159739811 + CT-rich Low_complexity Low_complexity 1 139 0 448 319 96 43 chr2 93517479 93517874 -159738709 - L2 LINE L2 -448 2866 2451 251 314 57 14 chr2 93518692 93518832 -159737751 + ERVL LTR ERVL 462 607 -5047 449 346 43 0 chr2 93519171 93519379 -159737204 + ERVL LTR ERVL 2286 2502 -3262 3706 158 54 40 chr2 93522970 93523819 -159732764 + MER4D LTR ERV1 1 465 0 378 0 0 0 chr2 93523897 93523939 -159732644 + (GA)n Simple_repeat Simple_repeat 1 42 0 773 269 122 40 chr2 93524025 93524449 -159732134 + MLT1D LTR MaLR 43 505 0 273 345 36 43 chr2 93524809 93524948 -159731635 - MIR3 SINE MIR -62 146 9 3054 34 0 6 chr2 93525239 93525589 -159730994 + L1PA5 LINE L1 5805 6152 -2 1543 236 104 13 chr2 93525892 93526345 -159730238 - MLT1D LTR MaLR 0 505 12 556 293 119 13 chr2 93526756 93527067 -159729516 - LTR16C LTR ERVL -38 453 110 2288 94 14 0 chr2 93530008 93530296 -159726287 + AluSx SINE Alu 2 293 -19 21 36 0 0 chr2 93531482 93531510 -159725073 + AT_rich Low_complexity Low_complexity 1 28 0 1899 167 0 3 chr2 93531716 93532022 -159724561 + AluJo SINE Alu 1 305 -7 622 184 28 21 chr2 93532056 93532197 -159724386 + FLAM_C SINE Alu 1 142 -1 448 300 108 12 chr2 93532259 93532499 -159724084 + L1MC/D LINE L1 5511 5773 -2035 1890 133 45 0 chr2 93532879 93533165 -159723418 + AluSx SINE Alu 1 299 -13 2323 77 0 14 chr2 93533165 93533462 -159723121 + AluSg1 SINE Alu 1 293 -16 31 0 0 43 chr2 93533732 93533753 -159722830 + AT_rich Low_complexity Low_complexity 1 21 -23 2229 91 40 0 chr2 93533753 93534050 -159722533 - AluY SINE Alu -2 309 1 31 0 0 43 chr2 93534050 93534074 -159722509 + AT_rich Low_complexity Low_complexity 21 44 0 22 35 0 0 chr2 93534160 93534189 -159722394 + AT_rich Low_complexity Low_complexity 1 29 0 661 268 25 29 chr2 93534225 93534464 -159722119 - AluSg1 SINE Alu -14 295 58 986 100 0 21 chr2 93534579 93534861 -159721722 + HSATII Satellite Satellite 1 276 0 1002 104 8 13 chr2 93534890 93535709 -159720874 + HSATII Satellite Satellite 1 814 -16 1032 106 0 0 chr2 93535741 93535911 -159720672 + HSATII Satellite Satellite 1 170 0 912 117 4 8 chr2 93535937 93536662 -159719921 + HSATII Satellite Satellite 1 721 0 281 67 0 22 chr2 93536692 93536737 -159719846 + (CATTC)n Satellite Satellite 2 45 0 921 137 0 0 chr2 93536749 93536917 -159719666 + HSATII Satellite Satellite 3 170 0 252 158 0 0 chr2 93536933 93536990 -159719593 + HSATII Satellite Satellite 1 57 -113 820 160 12 6 chr2 93537034 93537517 -159719066 + HSATII Satellite Satellite 1 486 -99 978 102 15 20 chr2 93537532 93538033 -159718550 + HSATII Satellite Satellite 1 498 -8 746 141 43 0 chr2 93538063 93538226 -159718357 + HSATII Satellite Satellite 1 170 0 1117 113 3 7 chr2 93538252 93541404 -159715179 + HSATII Satellite Satellite 1 3137 0 958 99 13 16 chr2 93541433 93542168 -159714415 + HSATII Satellite Satellite 1 732 0 957 129 5 5 chr2 93542195 93543411 -159713172 + HSATII Satellite Satellite 1 1216 0 814 160 10 10 chr2 93543427 93544008 -159712575 + HSATII Satellite Satellite 1 581 -53 846 127 6 25 chr2 93544026 93544493 -159712090 + HSATII Satellite Satellite 1 458 -21 755 153 14 0 chr2 93544516 93544732 -159711851 + HSATII Satellite Satellite 1 219 -99 748 121 0 32 chr2 93544747 93544904 -159711679 + HSATII Satellite Satellite 12 163 -7 1010 109 19 4 chr2 93544950 93545504 -159711079 + HSATII Satellite Satellite 1 562 0 893 118 0 18 chr2 93545530 93545700 -159710883 + HSATII Satellite Satellite 4 170 0 1110 113 4 8 chr2 93545729 93548682 -159707901 + HSATII Satellite Satellite 1 2941 0 742 121 18 18 chr2 93548711 93548876 -159707707 + HSATII Satellite Satellite 4 168 -2 1018 103 5 19 chr2 93548902 93549478 -159707105 + HSATII Satellite Satellite 1 568 -65 1032 106 0 0 chr2 93549510 93549680 -159706903 + HSATII Satellite Satellite 1 170 0 951 126 6 6 chr2 93549706 93550686 -159705897 + HSATII Satellite Satellite 1 980 0 814 166 10 10 chr2 93550702 93551283 -159705300 + HSATII Satellite Satellite 1 581 -53 813 132 6 25 chr2 93551301 93551768 -159704815 + HSATII Satellite Satellite 1 458 -21 722 157 14 0 chr2 93551791 93552007 -159704576 + HSATII Satellite Satellite 1 219 -1 748 111 0 26 chr2 93552022 93552214 -159704369 + HSATII Satellite Satellite 1 186 -96 1010 68 16 0 chr2 93552235 93552425 -159704158 + HSATII Satellite Satellite 1 193 -85 754 125 18 0 chr2 93552436 93552785 -159703798 + HSATII Satellite Satellite 1 355 0 893 118 0 18 chr2 93552811 93552981 -159703602 + HSATII Satellite Satellite 4 170 0 1057 107 6 13 chr2 93553010 93553480 -159703103 + HSATII Satellite Satellite 1 467 -17 183 139 0 0 chr2 93553599 93553635 -159702948 + HSATII Satellite Satellite 108 143 -27 993 119 3 14 chr2 93553657 93554638 -159701945 + HSATII Satellite Satellite 1 970 0 814 161 10 10 chr2 93554654 93555238 -159701345 + HSATII Satellite Satellite 1 584 -50 1009 91 9 23 chr2 93555253 93555616 -159700967 + HSATII Satellite Satellite 1 357 -1 779 131 38 5 chr2 93555636 93556035 -159700548 + HSATII Satellite Satellite 1 412 0 893 118 0 18 chr2 93556061 93556231 -159700352 + HSATII Satellite Satellite 4 170 0 1089 112 11 9 chr2 93556260 93559631 -159696952 + HSATII Satellite Satellite 1 3375 -65 987 112 0 0 chr2 93559663 93559833 -159696750 + HSATII Satellite Satellite 1 170 0 951 126 6 6 chr2 93559859 93560839 -159695744 + HSATII Satellite Satellite 1 980 0 814 151 8 16 chr2 93560855 93561200 -159695383 + HSATII Satellite Satellite 1 342 -70 755 157 14 0 chr2 93561223 93561439 -159695144 + HSATII Satellite Satellite 1 219 -1 748 111 0 26 chr2 93561454 93561646 -159694937 + HSATII Satellite Satellite 1 186 -96 1010 91 26 0 chr2 93561667 93562027 -159694556 + HSATII Satellite Satellite 1 369 -8 1104 129 12 3 chr2 93562057 93563196 -159693387 + HSATII Satellite Satellite 1 1149 -1 1122 110 8 9 chr2 93563226 93565955 -159690628 + HSATII Satellite Satellite 1 2724 -16 978 118 0 0 chr2 93565987 93566157 -159690426 + HSATII Satellite Satellite 1 170 0 956 117 5 5 chr2 93566183 93566745 -159689838 + HSATII Satellite Satellite 1 561 -114 979 128 13 4 chr2 93566761 93567451 -159689132 + HSATII Satellite Satellite 1 695 -1 777 157 11 15 chr2 93567464 93568043 -159688540 + HSATII Satellite Satellite 1 576 0 1062 90 19 11 chr2 93568066 93568403 -159688180 + HSATII Satellite Satellite 1 339 -8 1143 114 6 6 chr2 93568433 93571280 -159685303 + HSATII Satellite Satellite 1 2846 -1 814 122 0 18 chr2 93571293 93571457 -159685126 + HSATII Satellite Satellite 10 170 0 958 109 7 9 chr2 93571476 93572344 -159684239 + HSATII Satellite Satellite 1 866 -16 1016 120 12 6 chr2 93572376 93573389 -159683194 + HSATII Satellite Satellite 1 1019 -3 290 29 0 0 chr2 93573394 93573429 -159683154 + (CATTC)n Satellite Satellite 4 38 0 968 107 5 10 chr2 93573436 93574019 -159682564 + HSATII Satellite Satellite 1 580 -8 702 119 13 13 chr2 93574034 93574345 -159682238 + HSATII Satellite Satellite 1 311 -100 201 94 0 0 chr2 93574470 93574502 -159682081 - HSATII Satellite Satellite -119 51 20 830 98 12 30 chr2 93574530 93574694 -159681889 - HSATII Satellite Satellite -2 168 8 888 124 16 10 chr2 93574710 93575263 -159681320 - HSATII Satellite Satellite 0 556 1 1023 123 0 0 chr2 93575286 93575773 -159680810 - HSATII Satellite Satellite -7 487 1 1134 117 3 6 chr2 93575793 93576774 -159679809 - HSATII Satellite Satellite -52 978 1 558 186 0 0 chr2 93576787 93576927 -159679656 - HSATII Satellite Satellite -21 149 10 1032 120 10 9 chr2 93576940 93579786 -159676797 - HSATII Satellite Satellite -101 2848 1 1110 105 5 10 chr2 93579815 93581050 -159675533 - HSATII Satellite Satellite -1 1228 1 356 302 133 53 chr2 93580995 93581061 -159675522 + L1MDb LINE L1 1010 1069 -5340 * 986 107 15 0 chr2 93581061 93581265 -159675318 - HSATII Satellite Satellite -128 207 1 356 302 133 53 chr2 93581265 93581296 -159675287 + L1MDb LINE L1 1069 1334 -5075 * 1045 110 8 9 chr2 93581276 93581812 -159674771 - HSATII Satellite Satellite 0 535 1 1022 114 16 7 chr2 93581841 93582540 -159674043 - HSATII Satellite Satellite -1 705 1 746 164 11 10 chr2 93582563 93583142 -159673441 - HSATII Satellite Satellite 0 579 1 976 119 10 3 chr2 93583154 93583786 -159672797 - HSATII Satellite Satellite -3 636 1 1031 93 0 17 chr2 93583807 93583979 -159672604 - HSATII Satellite Satellite -1 169 1 405 131 28 28 chr2 93583990 93584097 -159672486 - HSATII Satellite Satellite -57 113 7 954 117 9 0 chr2 93584119 93584433 -159672150 - HSATII Satellite Satellite -4 316 1 978 118 0 0 chr2 93584459 93584629 -159671954 - HSATII Satellite Satellite 0 170 1 1134 118 6 6 chr2 93584661 93587399 -159669184 - HSATII Satellite Satellite -1 2735 1 760 163 18 9 chr2 93587429 93587736 -159668847 - HSATII Satellite Satellite -3 309 1 1045 125 4 9 chr2 93587862 93588499 -159668084 + HSATII Satellite Satellite 1 634 0 342 298 165 51 chr2 93588528 93588844 -159667739 - L1MDb LINE L1 -5075 1334 983 1110 112 8 4 chr2 93588844 93589933 -159666650 + HSATII Satellite Satellite 1 1092 0 909 95 30 30 chr2 93589962 93590200 -159666383 + HSATII Satellite Satellite 1 238 -1 875 105 43 0 chr2 93590227 93590389 -159666194 + HSATII Satellite Satellite 1 169 -1 1005 117 7 11 chr2 93590402 93590845 -159665738 + HSATII Satellite Satellite 1 441 -16 990 118 0 0 chr2 93590877 93591047 -159665536 + HSATII Satellite Satellite 1 170 0 1040 118 11 7 chr2 93591073 93591867 -159664716 + HSATII Satellite Satellite 1 797 -3 991 108 11 11 chr2 93591881 93592151 -159664432 + HSATII Satellite Satellite 1 270 0 1000 81 19 0 chr2 93592209 93592369 -159664214 + HSATII Satellite Satellite 7 169 -1 857 153 5 11 chr2 93592382 93593013 -159663570 + HSATII Satellite Satellite 1 627 -1 931 106 24 6 chr2 93593024 93593331 -159663252 + HSATII Satellite Satellite 1 312 -8 788 129 43 0 chr2 93593361 93593524 -159663059 + HSATII Satellite Satellite 1 170 0 743 153 0 18 chr2 93593550 93593720 -159662863 + HSATII Satellite Satellite 4 170 0 1120 113 8 12 chr2 93593749 93595466 -159661117 + HSATII Satellite Satellite 1 1709 0 937 106 29 8 chr2 93595492 93595747 -159660836 + HSATII Satellite Satellite 1 260 -8 710 123 48 0 chr2 93595777 93595923 -159660660 + HSATII Satellite Satellite 1 153 -17 315 266 82 105 chr2 93595923 93596227 -159660356 - L1MDb LINE L1 -5111 1298 1002 890 109 16 23 chr2 93596234 93596629 -159659954 + HSATII Satellite Satellite 1 392 0 1069 111 5 11 chr2 93596655 93597625 -159658958 + HSATII Satellite Satellite 1 964 0 941 110 0 17 chr2 93597648 93597821 -159658762 + HSATII Satellite Satellite 1 170 0 991 112 0 28 chr2 93597844 93598397 -159658186 + HSATII Satellite Satellite 1 537 -7 318 214 0 0 chr2 93598380 93598469 -159658114 + (CACTC)n Simple_repeat Simple_repeat 4 92 0 * 579 81 0 0 chr2 93598535 93598621 -159657962 + (CATTC)n Simple_repeat Simple_repeat 5 90 0 315 267 127 79 chr2 93598682 93599122 -159657461 - L1MDa LINE L1 -4436 2412 1692 273 300 119 40 chr2 93599160 93599463 -159657120 - L1MEd LINE L1 -4867 1252 926 21 36 0 0 chr2 93599512 93599540 -159657043 + AT_rich Low_complexity Low_complexity 1 28 0 233 312 54 11 chr2 93599742 93599835 -159656748 - L1MEd LINE L1 -5493 626 530 2432 79 0 0 chr2 93600670 93600961 -159655622 + AluY SINE Alu 1 291 -20 2300 94 10 0 chr2 93601364 93601662 -159654921 + AluSp SINE Alu 1 301 -12 2270 103 14 0 chr2 93602083 93602374 -159654209 + AluSx SINE Alu 2 296 -16 21 36 0 0 chr2 93603554 93603582 -159653001 + AT_rich Low_complexity Low_complexity 1 28 0 1908 162 0 3 chr2 93603788 93604084 -159652499 + AluJo SINE Alu 1 295 -17 641 186 29 21 chr2 93604118 93604258 -159652325 + FLAM_C SINE Alu 2 142 -1 345 301 151 20 chr2 93604268 93604560 -159652023 + L1MC/D LINE L1 5444 5773 -2035 1941 133 45 0 chr2 93604940 93605226 -159651357 + AluSx SINE Alu 1 299 -13 2177 85 31 20 chr2 93605226 93605519 -159651064 + AluSg1 SINE Alu 1 296 -13 31 0 0 43 chr2 93605784 93605805 -159650778 + AT_rich Low_complexity Low_complexity 1 21 -23 2319 84 40 0 chr2 93605805 93606102 -159650481 - AluY SINE Alu -2 309 1 31 0 0 43 chr2 93606102 93606126 -159650457 + AT_rich Low_complexity Low_complexity 21 44 0 2149 119 3 3 chr2 93606268 93606563 -159650020 - AluSg SINE Alu -15 295 1 2284 125 0 0 chr2 93607031 93607327 -159649256 + AluSx SINE Alu 1 296 -16 1026 163 47 0 chr2 93607349 93607521 -159649062 - MER5A DNA MER1_type -9 180 1 264 59 0 0 chr2 93607561 93607595 -159648988 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2086 136 13 10 chr2 93607641 93607951 -159648632 + AluSx SINE Alu 1 311 -1 303 139 0 0 chr2 93607978 93608021 -159648562 - Alu SINE Alu -265 43 1 369 259 155 0 chr2 93608401 93608517 -159648066 - L2 LINE L2 0 3313 3180 978 154 71 0 chr2 93608700 93608869 -159647714 - AluJo SINE Alu -11 301 121 384 273 7 49 chr2 93609064 93609207 -159647376 - L1MA9 LINE L1 -181 6131 5995 2291 76 3 26 chr2 93609247 93609551 -159647032 + AluY SINE Alu 1 297 -14 428 277 20 14 chr2 93609905 93609918 -159646665 + L1MA6 LINE L1 6134 6145 -155 2321 98 3 0 chr2 93609918 93610215 -159646368 + AluSq SINE Alu 1 298 -15 428 277 20 14 chr2 93610215 93610349 -159646234 + L1MA6 LINE L1 6145 6282 -18 1734 178 7 17 chr2 93610352 93610644 -159645939 - AluJo SINE Alu -20 292 4 408 97 0 0 chr2 93610837 93610899 -159645684 + (TG)n Simple_repeat Simple_repeat 2 63 0 194 0 0 37 chr2 93611881 93611908 -159644675 + (TG)n Simple_repeat Simple_repeat 1 26 0 255 81 16 65 chr2 93611996 93612058 -159644525 + (TTTC)n Simple_repeat Simple_repeat 4 62 0 922 184 3 18 chr2 93612059 93612379 -159644204 + CT-rich Low_complexity Low_complexity 1 315 0 1107 60 0 62 chr2 93612381 93613418 -159643165 + (GCTG)n Simple_repeat Simple_repeat 1 1145 0 1107 43 0 32 chr2 93613418 93613603 -159642980 + (GCTG)n Simple_repeat Simple_repeat 2 180 0 780 93 0 64 chr2 93613749 93614373 -159642210 + (GCTG)n Simple_repeat Simple_repeat 1 583 0 442 65 0 80 chr2 93614393 93614531 -159642052 + (GCTG)n Simple_repeat Simple_repeat 2 128 0 765 63 0 63 chr2 93614600 93614789 -159641794 + (GCTG)n Simple_repeat Simple_repeat 2 178 0 816 84 0 71 chr2 93614834 93615586 -159640997 + (GCTG)n Simple_repeat Simple_repeat 1 698 0 836 67 0 61 chr2 93615612 93615978 -159640605 + (GCTG)n Simple_repeat Simple_repeat 2 520 0 744 89 0 70 chr2 93615996 93616467 -159640116 + (GCTG)n Simple_repeat Simple_repeat 1 438 0 667 67 0 72 chr2 93616515 93616709 -159639874 + (GCTG)n Simple_repeat Simple_repeat 1 180 0 802 74 0 69 chr2 93616744 93617200 -159639383 + (GCTG)n Simple_repeat Simple_repeat 1 424 0 562 67 0 59 chr2 93617252 93617387 -159639196 + (GCTG)n Simple_repeat Simple_repeat 4 130 0 810 59 0 68 chr2 93617404 93617786 -159638797 + (GCTG)n Simple_repeat Simple_repeat 2 532 0 478 94 0 77 chr2 93617806 93617987 -159638596 + (GCTG)n Simple_repeat Simple_repeat 2 168 0 795 63 0 63 chr2 93618036 93618227 -159638356 + (GCTG)n Simple_repeat Simple_repeat 2 180 0 486 85 0 73 chr2 93618253 93618417 -159638166 + (GCTG)n Simple_repeat Simple_repeat 3 154 0 733 76 0 72 chr2 93618430 93618931 -159637652 + (GCTG)n Simple_repeat Simple_repeat 1 464 0 813 79 0 66 chr2 93618966 93620356 -159636227 + (GCTG)n Simple_repeat Simple_repeat 1 1476 0 428 92 0 79 chr2 93620376 93620540 -159636043 + (GCTG)n Simple_repeat Simple_repeat 2 152 0 762 68 0 63 chr2 93620589 93620780 -159635803 + (GCTG)n Simple_repeat Simple_repeat 2 180 0 692 81 0 69 chr2 93620806 93621126 -159635457 + (GCTG)n Simple_repeat Simple_repeat 1 298 0 795 78 0 70 chr2 93621169 93621541 -159635042 + (GCTG)n Simple_repeat Simple_repeat 1 345 0 700 62 0 72 chr2 93621560 93621754 -159634829 + (GCTG)n Simple_repeat Simple_repeat 1 180 0 835 72 0 67 chr2 93621789 93622236 -159634347 + (GCTG)n Simple_repeat Simple_repeat 1 416 0 755 84 0 71 chr2 93622311 93622693 -159633890 + (GCTG)n Simple_repeat Simple_repeat 1 355 0 723 82 0 69 chr2 93622738 93623279 -159633304 + (GCTG)n Simple_repeat Simple_repeat 1 503 0 802 82 0 68 chr2 93623314 93623813 -159632770 + (GCTG)n Simple_repeat Simple_repeat 1 465 0 781 79 0 65 chr2 93623841 93624279 -159632304 + (GCTG)n Simple_repeat Simple_repeat 1 409 0 759 76 3 66 chr2 93624299 93624679 -159631904 + (GCTG)n Simple_repeat Simple_repeat 1 356 0 837 76 1 68 chr2 93624707 93625851 -159630732 + (GCTG)n Simple_repeat Simple_repeat 1 1067 0 762 80 0 77 chr2 93625905 93626300 -159630283 + (GCTG)n Simple_repeat Simple_repeat 1 364 0 740 74 0 63 chr2 93626355 93626821 -159629762 + (GCTG)n Simple_repeat Simple_repeat 1 436 0 759 77 0 70 chr2 93626841 93627734 -159628849 + (GCTG)n Simple_repeat Simple_repeat 1 830 0 534 78 0 78 chr2 93627760 93627952 -159628631 + (GCTG)n Simple_repeat Simple_repeat 2 178 0 726 75 0 66 chr2 93627972 93628319 -159628264 + (GCTG)n Simple_repeat Simple_repeat 1 324 0 853 77 0 72 chr2 93628347 93629381 -159627202 + (GCTG)n Simple_repeat Simple_repeat 1 959 0 21 0 0 0 chr2 93629386 93629407 -159627176 + AT_rich Low_complexity Low_complexity 1 21 0 368 217 51 19 chr2 93629620 93629943 -159626640 + (TA)n Simple_repeat Simple_repeat 1 333 0 24 0 0 0 chr2 93630039 93630063 -159626520 + AT_rich Low_complexity Low_complexity 1 24 0 1933 133 3 3 chr2 93630487 93630772 -159625811 + AluSq SINE Alu 24 308 -5 277 227 39 19 chr2 93631259 93631413 -159625170 + (TA)n Simple_repeat Simple_repeat 1 157 0 223 93 72 41 chr2 93631547 93631644 -159624939 + (TTATA)n Simple_repeat Simple_repeat 5 104 0 324 172 69 81 chr2 93631649 93631736 -159624847 - L1MC4 LINE L1 -1339 6703 6618 308 250 75 25 chr2 93631934 93632014 -159624569 - L1MC4 LINE L1 -1341 6701 6618 225 0 0 0 chr2 93632212 93632237 -159624346 + (TA)n Simple_repeat Simple_repeat 2 26 0 247 252 24 16 chr2 93632261 93632384 -159624199 + (TA)n Simple_repeat Simple_repeat 2 125 0 26 0 0 0 chr2 93632458 93632484 -159624099 + AT_rich Low_complexity Low_complexity 1 26 0 2115 92 0 0 chr2 93632500 93632772 -159623811 + AluSx SINE Alu 12 283 -29 263 263 7 26 chr2 93632952 93633104 -159623479 + (TATAA)n Simple_repeat Simple_repeat 4 152 0 47 73 0 0 chr2 93633130 93633226 -159623357 + AT_rich Low_complexity Low_complexity 1 96 0 270 259 40 11 chr2 93633231 93633405 -159623178 + (TA)n Simple_repeat Simple_repeat 1 179 0 45 100 0 0 chr2 93633411 93633561 -159623022 + AT_rich Low_complexity Low_complexity 1 150 0 22 56 0 0 chr2 93634449 93634485 -159622098 + AT_rich Low_complexity Low_complexity 1 36 0 189 154 0 0 chr2 93634588 93634627 -159621956 + (CA)n Simple_repeat Simple_repeat 2 40 0 283 275 31 6 chr2 93634668 93634828 -159621755 + (TA)n Simple_repeat Simple_repeat 2 165 0 236 232 28 28 chr2 93634894 93635036 -159621547 + (TA)n Simple_repeat Simple_repeat 1 142 0 23 0 0 0 chr2 93635036 93635059 -159621524 + AT_rich Low_complexity Low_complexity 1 23 0 388 275 7 0 chr2 93635378 93635516 -159621067 + (CA)n Simple_repeat Simple_repeat 2 140 0 416 288 0 6 chr2 93635657 93635820 -159620763 + (CA)n Simple_repeat Simple_repeat 2 163 0 2179 92 0 3 chr2 93635823 93636118 -159620465 + AluSx SINE Alu 1 294 -18 1112 133 0 0 chr2 93636118 93636283 -159620300 + AluSg/x SINE Alu 132 296 -14 293 326 6 6 chr2 93636295 93636467 -159620116 + (CA)n Simple_repeat Simple_repeat 1 172 0 260 188 0 12 chr2 93636483 93636568 -159620015 + (CA)n Simple_repeat Simple_repeat 1 84 0 266 0 0 29 chr2 93637627 93637662 -159618921 + (TTA)n Simple_repeat Simple_repeat 3 36 0 571 186 0 0 chr2 93637662 93637764 -159618819 - L1PA16 LINE L1 -25 6141 6040 2292 99 0 0 chr2 93637898 93638201 -159618382 + AluSx SINE Alu 1 303 -9 1387 181 2 11 chr2 93638310 93638747 -159617836 - L1PA16 LINE L1 -133 6033 5718 887 150 12 12 chr2 93638741 93638901 -159617682 - L1PA16 LINE L1 -245 5921 5762 * 941 158 0 6 chr2 93638901 93639059 -159617524 - L1PA16 LINE L1 -247 5919 5763 1603 158 0 67 chr2 93639062 93639299 -159617284 - L1PA16 LINE L1 -249 5917 5707 2025 101 7 0 chr2 93639299 93639576 -159617007 + AluSx SINE Alu 23 301 -11 1603 158 0 67 chr2 93639576 93639667 -159616916 - L1PA16 LINE L1 -459 5707 5611 1550 166 9 69 chr2 93639672 93639944 -159616639 - L1PA16 LINE L1 -22 6144 5894 3170 106 2 2 chr2 93639944 93640388 -159616195 + L1PA7 LINE L1 5708 6151 -3 1550 166 9 69 chr2 93640388 93640447 -159616136 - L1PA16 LINE L1 -272 5894 5833 210 71 0 0 chr2 93640447 93640475 -159616108 + (A)n Simple_repeat Simple_repeat 1 28 0 371 162 0 54 chr2 93640475 93640549 -159616034 - L1PA16 LINE L1 -323 5838 5769 232 56 0 0 chr2 93640549 93640585 -159615998 + L1PA13 LINE L1 5999 6034 -129 1876 153 0 0 chr2 93640589 93640877 -159615706 + AluSx SINE Alu 1 288 -24 183 42 0 0 chr2 93640938 93640962 -159615621 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1941 100 22 59 chr2 93641384 93641526 -159615057 + AluSg SINE Alu 1 147 -163 2198 93 0 22 chr2 93641526 93641838 -159614745 + AluY SINE Alu 1 305 -6 1941 100 22 59 chr2 93641838 93642015 -159614568 + AluSg SINE Alu 147 308 -2 639 192 0 0 chr2 93642099 93642203 -159614380 + FLAM_C SINE Alu 2 105 -38 3193 261 33 6 chr2 93642204 93643023 -159613560 - ERVL LTR ERVL -3750 2014 1174 358 148 20 0 chr2 93643026 93643127 -159613456 + (CCAA)n Simple_repeat Simple_repeat 1 103 0 896 238 0 0 chr2 93643129 93643316 -159613267 - ERVL LTR ERVL -4575 1189 1002 294 29 0 0 chr2 93643316 93643351 -159613232 + (TG)n Simple_repeat Simple_repeat 2 36 0 4844 175 22 29 chr2 93643363 93644291 -159612292 - MER49 LTR ERV1 -2 921 1 300 293 30 0 chr2 93644303 93644402 -159612181 - MLT2C1 LTR ERVL -59 338 237 356 274 29 0 chr2 93644436 93644538 -159612045 - MLT2C1 LTR ERVL -291 106 2 238 366 114 0 chr2 93644854 93644977 -159611606 - MIR SINE MIR -78 184 48 270 292 54 23 chr2 93645765 93645895 -159610688 + MIR SINE MIR 3 136 -126 1204 204 55 16 chr2 93646124 93646430 -159610153 + MLT1D LTR MaLR 206 505 0 21 0 0 0 chr2 93646669 93646690 -159609893 + AT_rich Low_complexity Low_complexity 1 21 0 182 303 101 0 chr2 93647500 93647589 -159608994 - L2 LINE L2 -215 3057 2960 355 250 75 44 chr2 93648130 93648290 -159608293 + MIR3 SINE MIR 3 167 -41 2193 110 0 3 chr2 93649066 93649375 -159607208 + AluSq SINE Alu 1 308 -5 831 266 15 20 chr2 93650286 93650612 -159605971 - MER34C LTR ERV1 -155 430 63 6268 43 0 4 chr2 93651355 93652105 -159604478 + L1PA5 LINE L1 5408 6154 0 280 295 21 0 chr2 93652864 93652959 -159603624 - L2 LINE L2 -1 3312 3216 24 77 0 0 chr2 93654465 93654517 -159602066 + AT_rich Low_complexity Low_complexity 1 52 0 1713 163 10 26 chr2 93654979 93655285 -159601298 - AluSp SINE Alu -12 301 1 1929 142 0 3 chr2 93655657 93655952 -159600631 + AluSx SINE Alu 1 294 -18 211 314 0 0 chr2 93656119 93656189 -159600394 - MIR SINE MIR -8 254 185 3520 173 3 14 chr2 93656504 93657163 -159599420 - L1MA5 LINE L1 -7 6293 5642 2748 205 28 24 chr2 93657165 93657876 -159598707 + L1 LINE L1 3884 4597 -1549 31 26 0 0 chr2 93658518 93658556 -159598027 + AT_rich Low_complexity Low_complexity 1 38 0 522 111 89 0 chr2 93658609 93658744 -159597839 + (CATCT)n Simple_repeat Simple_repeat 5 151 0 351 281 116 80 chr2 93658747 93659568 -159597015 - L1MEd LINE L1 -4875 1244 795 361 126 50 50 chr2 93659577 93659696 -159596887 + (CATCT)n Simple_repeat Simple_repeat 5 123 0 431 276 87 87 chr2 93659696 93660941 -159595642 - L1MEd LINE L1 -4902 1217 979 253 78 0 39 chr2 93660941 93660992 -159595591 + (CATTT)n Simple_repeat Simple_repeat 5 53 0 431 276 87 87 chr2 93660992 93661184 -159595399 - L1MEd LINE L1 -5140 979 789 457 116 65 34 chr2 93661184 93661417 -159595166 + (CATCT)n Simple_repeat Simple_repeat 1 240 0 1341 203 50 17 chr2 93661528 93661884 -159594699 - AluJo SINE Alu 0 366 1 688 204 23 15 chr2 93661885 93662017 -159594566 - AluJo SINE Alu -178 134 2 230 320 47 0 chr2 93662447 93662575 -159594008 + (CTAGGG)n Simple_repeat Simple_repeat 3 136 0 287 127 0 85 chr2 93662577 93662742 -159593841 + (CAGGG)n Simple_repeat Simple_repeat 5 155 0 285 136 0 85 chr2 93662872 93663048 -159593535 + (CAGGG)n Simple_repeat Simple_repeat 1 161 0 337 173 0 81 chr2 93663099 93663407 -159593176 + (CAGGG)n Simple_repeat Simple_repeat 1 283 0 288 127 0 75 chr2 93663540 93663674 -159592909 + (CAGGG)n Simple_repeat Simple_repeat 1 124 0 256 213 5 80 chr2 93663781 93663969 -159592614 + (CAGAG)n Simple_repeat Simple_repeat 5 178 0 * 376 174 0 87 chr2 93663869 93664065 -159592518 + (CAGGG)n Simple_repeat Simple_repeat 1 179 0 203 119 0 90 chr2 93664138 93664205 -159592378 + (CCCTG)n Simple_repeat Simple_repeat 1 61 0 772 134 0 17 chr2 93664259 93664378 -159592205 - AluSq/x SINE Alu -180 133 17 380 275 16 77 chr2 93664380 93664562 -159592021 + MIR SINE MIR 92 262 0 385 281 54 0 chr2 93664679 93664846 -159591737 + (CCCTAG)n Simple_repeat Simple_repeat 2 177 0 354 226 67 5 chr2 93665059 93665471 -159591112 + (CTAGGG)n Simple_repeat Simple_repeat 1 437 0 435 276 40 0 chr2 93665500 93665652 -159590931 + (CTAGGG)n Simple_repeat Simple_repeat 3 160 0 329 296 47 0 chr2 93665683 93665852 -159590731 + (CTAGGG)n Simple_repeat Simple_repeat 3 179 0 344 286 54 6 chr2 93665938 93666106 -159590477 + (CTAGGG)n Simple_repeat Simple_repeat 3 178 0 213 103 0 69 chr2 93666115 93666173 -159590410 + (CAGGG)n Simple_repeat Simple_repeat 1 54 0 295 309 29 29 chr2 93666285 93666460 -159590123 + (CTAGGG)n Simple_repeat Simple_repeat 4 178 0 450 209 51 40 chr2 93666503 93666680 -159589903 + (CTAGGG)n Simple_repeat Simple_repeat 1 179 0 334 254 48 24 chr2 93666740 93666905 -159589678 + (CTAGGG)n Simple_repeat Simple_repeat 1 169 0 * 382 152 0 123 chr2 93666852 93667056 -159589527 + (CAGGG)n Simple_repeat Simple_repeat 1 179 0 * 395 276 47 0 chr2 93666934 93667104 -159589479 + (CTAGGG)n Simple_repeat Simple_repeat 1 178 0 200 146 0 21 chr2 93667121 93667169 -159589414 + (CAGGG)n Simple_repeat Simple_repeat 1 47 0 388 178 0 72 chr2 93667252 93667404 -159589179 + (CAGGG)n Simple_repeat Simple_repeat 1 141 0 394 270 47 0 chr2 93667443 93667591 -159588992 + (CTAGGG)n Simple_repeat Simple_repeat 6 160 0 260 199 0 92 chr2 93667570 93667766 -159588817 + (CAGGG)n Simple_repeat Simple_repeat 2 179 0 * 190 143 41 0 chr2 93667827 93667876 -159588707 + (CTAGGG)n Simple_repeat Simple_repeat 2 52 0 350 191 6 65 chr2 93667972 93668386 -159588197 + (CAGGG)n Simple_repeat Simple_repeat 1 389 0 839 272 99 27 chr2 93669216 93669568 -159587015 - HSREP522 Satellite telomeric -171 377 1 4904 223 67 9 chr2 93669703 93670993 -159585590 + L1 LINE L1 2785 4148 -1998 2682 116 84 6 chr2 93670993 93671459 -159585124 - HSREP522 Satellite telomeric 0 504 3 1546 167 223 8 chr2 93671480 93672122 -159584461 - TAR1 Satellite telomeric -244 1867 1088 2091 102 0 41 chr2 93672477 93672791 -159583792 - AluSg SINE Alu -9 301 1 371 326 0 23 chr2 93673091 93673223 -159583360 + (CA)n Simple_repeat Simple_repeat 1 129 0 184 270 16 16 chr2 93673371 93673434 -159583149 - L2 LINE L2 -6 3266 3204 353 266 117 9 chr2 93674181 93674317 -159582266 - MIR SINE MIR -71 137 37 963 244 98 98 chr2 93676767 93677287 -159579296 - L1ME3A LINE L1 0 6170 5648 303 93 0 0 chr2 93677287 93677330 -159579253 + (TG)n Simple_repeat Simple_repeat 2 44 0 963 244 98 98 chr2 93677330 93677421 -159579162 - L1ME3A LINE L1 -521 5649 5559 426 282 81 5 chr2 93677425 93677634 -159578949 - L1MC4a LINE L1 -1910 5898 5674 327 231 90 32 chr2 93677658 93677814 -159578769 - L1ME4a LINE L1 -1 6120 5956 1912 139 3 13 chr2 93677822 93678131 -159578452 - AluJb SINE Alu -6 306 1 1198 166 0 24 chr2 93679226 93679437 -159577146 - AluJo SINE Alu -22 290 85 787 165 8 0 chr2 93680599 93680726 -159575857 - FLAM_A SINE Alu -5 128 1 23 0 0 0 chr2 93681304 93681327 -159575256 + AT_rich Low_complexity Low_complexity 1 23 0 182 239 43 0 chr2 93681584 93681630 -159574953 + MIR SINE MIR 45 92 -170 764 116 313 0 chr2 93681657 93681804 -159574779 + MER46A DNA MER2_type 44 236 0 305 271 115 33 chr2 93681809 93681931 -159574652 + MIR SINE MIR 124 255 -7 6773 114 63 14 chr2 93682444 93683593 -159572990 + HSMAR2 DNA Mariner 93 1297 -5 2468 141 19 61 chr2 93683598 93683993 -159572590 - L1MA8 LINE L1 -70 6221 5852 1874 169 3 16 chr2 93683993 93684164 -159572419 - AluJb SINE Alu -8 304 137 1934 102 109 4 chr2 93684164 93684430 -159572153 - AluSp SINE Alu -19 294 1 1874 169 3 16 chr2 93684430 93684566 -159572017 - AluJb SINE Alu -175 137 1 2468 141 19 61 chr2 93684566 93684695 -159571888 - L1MA8 LINE L1 -439 5852 5719 1823 221 27 27 chr2 93684703 93685146 -159571437 + MLT1C LTR MaLR 1 443 -24 2364 114 0 3 chr2 93685159 93685467 -159571116 + AluSg SINE Alu 1 307 -3 5130 62 10 0 chr2 93685654 93686335 -159570248 + L1PA5 LINE L1 5467 6154 0 3444 184 64 28 chr2 93688720 93689569 -159567014 + MER4D LTR ERV1 1 465 0 378 0 0 0 chr2 93689647 93689689 -159566894 + (GA)n Simple_repeat Simple_repeat 1 42 0 784 269 122 40 chr2 93689775 93690199 -159566384 + MLT1D LTR MaLR 43 505 0 245 352 35 42 chr2 93690559 93690701 -159565882 - MIR3 SINE MIR -62 146 6 2743 40 0 6 chr2 93690989 93691341 -159565242 + L1PA5 LINE L1 5805 6154 0 1455 238 104 13 chr2 93691642 93692095 -159564488 - MLT1D LTR MaLR 0 505 12 565 312 116 10 chr2 93692506 93692817 -159563766 - LTR16C LTR ERVL -38 453 110 24 32 0 0 chr2 93695731 93695762 -159560821 + AT_rich Low_complexity Low_complexity 1 31 0 2552 90 3 0 chr2 93695870 93696182 -159560401 + AluSp SINE Alu 1 313 0 224 329 167 29 chr2 93696245 93696332 -159560251 + L2 LINE L2 1698 1772 -1542 2240 99 0 0 chr2 93696332 93696636 -159559947 + AluSc SINE Alu 2 305 0 224 329 167 29 chr2 93696636 93697031 -159559552 + L2 LINE L2 1772 2248 -1066 190 331 145 48 chr2 93697118 93697408 -159559175 + L2 LINE L2 2432 2749 -565 874 240 163 33 chr2 93697410 93697773 -159558810 + L1MC4 LINE L1 7632 8041 -1 1598 205 7 7 chr2 93697780 93698073 -159558510 + AluJo SINE Alu 1 293 -19 2151 113 18 0 chr2 93698398 93698682 -159557901 + AluSc SINE Alu 1 289 -20 2255 123 3 7 chr2 93698694 93699004 -159557579 + AluSx SINE Alu 1 309 -3 2411 81 13 3 chr2 93699039 93699347 -159557236 - AluY SINE Alu 0 311 1 2378 85 0 3 chr2 93699919 93700212 -159556371 + AluY SINE Alu 1 292 -19 2277 110 7 0 chr2 93700616 93700915 -159555668 + AluSp SINE Alu 1 301 -12 2304 100 14 0 chr2 93701334 93701625 -159554958 + AluSx SINE Alu 2 296 -16 21 36 0 0 chr2 93702808 93702836 -159553747 + AT_rich Low_complexity Low_complexity 1 28 0 2009 161 0 3 chr2 93703042 93703352 -159553231 + AluJo SINE Alu 1 309 -3 596 186 29 21 chr2 93703387 93703527 -159553056 + FLAM_C SINE Alu 2 142 -1 396 300 108 12 chr2 93703589 93703829 -159552754 + L1MC/D LINE L1 5511 5773 -2035 1990 128 45 0 chr2 93704209 93704497 -159552086 + AluSx SINE Alu 1 301 -11 2345 86 0 13 chr2 93704497 93704798 -159551785 + AluSg1 SINE Alu 1 297 -12 31 0 0 43 chr2 93705065 93705086 -159551497 + AT_rich Low_complexity Low_complexity 1 21 -23 2329 84 40 0 chr2 93705086 93705383 -159551200 - AluY SINE Alu -2 309 1 31 0 0 43 chr2 93705383 93705407 -159551176 + AT_rich Low_complexity Low_complexity 21 44 0 2119 125 3 3 chr2 93705549 93705844 -159550739 - AluSg SINE Alu -15 295 1 2287 125 0 0 chr2 93706312 93706608 -159549975 + AluSx SINE Alu 1 296 -16 959 163 47 0 chr2 93706630 93706802 -159549781 - MER5A DNA MER1_type -9 180 1 264 59 0 0 chr2 93706842 93706876 -159549707 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2065 142 13 10 chr2 93706922 93707233 -159549350 + AluSx SINE Alu 1 312 0 312 139 0 0 chr2 93707257 93707300 -159549283 - Alu SINE Alu -265 43 1 341 259 155 0 chr2 93707680 93707796 -159548787 - L2 LINE L2 0 3313 3180 1010 148 71 0 chr2 93707979 93708148 -159548435 - AluJo SINE Alu -11 301 121 397 273 7 49 chr2 93708343 93708486 -159548097 - L1MA9 LINE L1 -181 6131 5995 2290 79 3 26 chr2 93708526 93708831 -159547752 + AluY SINE Alu 1 298 -13 441 277 20 14 chr2 93709185 93709198 -159547385 + L1MA6 LINE L1 6134 6145 -155 2386 95 3 0 chr2 93709198 93709502 -159547081 + AluSq SINE Alu 1 305 -8 441 277 20 14 chr2 93709502 93709636 -159546947 + L1MA6 LINE L1 6145 6282 -18 1750 174 7 20 chr2 93709639 93709932 -159546651 - AluJo SINE Alu -20 292 4 372 103 0 0 chr2 93710125 93710183 -159546400 + (TG)n Simple_repeat Simple_repeat 2 59 0 311 165 57 51 chr2 93711303 93711479 -159545104 + (TTCTG)n Simple_repeat Simple_repeat 4 180 0 830 142 6 33 chr2 93711523 93711706 -159544877 + CT-rich Low_complexity Low_complexity 3 180 0 858 31 0 77 chr2 93711743 93711938 -159544645 + (GCTG)n Simple_repeat Simple_repeat 1 180 0 891 26 0 77 chr2 93711945 93712010 -159544573 + (GCTG)n Simple_repeat Simple_repeat 1 240 0 891 26 0 77 chr2 93712010 93712205 -159544378 + (GCTG)n Simple_repeat Simple_repeat 1 180 0 237 40 0 60 chr2 93712217 93712267 -159544316 + (GCTG)n Simple_repeat Simple_repeat 4 50 0 781 52 0 72 chr2 93712284 93712477 -159544106 + (GCTG)n Simple_repeat Simple_repeat 2 180 0 614 59 3 89 chr2 93712488 93712883 -159543700 + (GCTG)n Simple_repeat Simple_repeat 1 360 0 842 50 0 74 chr2 93712927 93713819 -159542764 + (GCTG)n Simple_repeat Simple_repeat 2 1004 0 669 58 5 74 chr2 93713845 93714035 -159542548 + (GCTG)n Simple_repeat Simple_repeat 2 178 0 530 84 0 73 chr2 93714079 93714257 -159542326 + (GCTG)n Simple_repeat Simple_repeat 2 166 0 292 107 67 13 chr2 93714262 93714337 -159542246 + (GCTTG)n Simple_repeat Simple_repeat 3 81 0 659 77 0 74 chr2 93714337 93714623 -159541960 + (GCTG)n Simple_repeat Simple_repeat 1 264 0 676 46 0 88 chr2 93714636 93714830 -159541753 + (GCTG)n Simple_repeat Simple_repeat 2 178 0 743 76 0 66 chr2 93714973 93715509 -159541074 + (GCTG)n Simple_repeat Simple_repeat 1 500 0 1127 77 0 53 chr2 93715539 93716164 -159540419 + (GCTG)n Simple_repeat Simple_repeat 1 591 0 666 58 0 75 chr2 93716176 93716427 -159540156 + (GCTG)n Simple_repeat Simple_repeat 1 232 0 841 78 0 59 chr2 93716453 93716825 -159539758 + (GCTG)n Simple_repeat Simple_repeat 1 349 0 1053 169 0 11 chr2 93716832 93717010 -159539573 - AluSg/x SINE Alu -53 259 84 1441 143 0 9 chr2 93717011 93717242 -159539341 - AluSg/x SINE Alu -2 308 80 286 154 0 0 chr2 93717242 93717294 -159539289 - Alu SINE Alu -2 298 247 1340 153 0 9 chr2 93717294 93717510 -159539073 - AluSg/x SINE Alu -16 296 83 1590 124 0 9 chr2 93717510 93717736 -159538847 - AluSg/x SINE Alu -7 305 82 372 88 0 0 chr2 93717743 93717800 -159538783 - Alu SINE Alu 0 302 246 1365 158 0 14 chr2 93717800 93718015 -159538568 - AluSg/x SINE Alu -19 291 80 362 70 0 0 chr2 93718023 93718080 -159538503 - Alu SINE Alu 0 301 245 1460 131 0 9 chr2 93718080 93718294 -159538289 - AluSg/x SINE Alu -19 293 82 1434 134 0 31 chr2 93718294 93718461 -159538122 - AluSg/x SINE Alu -12 300 140 2303 101 0 0 chr2 93718461 93718758 -159537825 - AluSc SINE Alu -12 297 1 1434 134 0 31 chr2 93718758 93718814 -159537769 - AluSg/x SINE Alu -172 140 84 366 88 0 0 chr2 93718819 93718876 -159537707 - Alu SINE Alu 0 301 245 1431 136 0 9 chr2 93718876 93719090 -159537493 - AluSg/x SINE Alu -19 293 82 1495 131 0 9 chr2 93719091 93719312 -159537271 - AluSg/x SINE Alu -12 298 80 1413 158 0 5 chr2 93719312 93719533 -159537050 - AluSg/x SINE Alu -6 304 85 747 69 0 64 chr2 93719565 93719753 -159536830 + (GCTG)n Simple_repeat Simple_repeat 4 179 0 678 90 0 59 chr2 93719780 93720105 -159536478 + (GCTG)n Simple_repeat Simple_repeat 1 305 0 770 68 0 68 chr2 93720116 93720308 -159536275 + (GCTG)n Simple_repeat Simple_repeat 2 180 0 814 77 0 58 chr2 93720360 93720745 -159535838 + (GCTG)n Simple_repeat Simple_repeat 1 362 0 783 87 0 70 chr2 93720757 93721567 -159535016 + (GCTG)n Simple_repeat Simple_repeat 1 753 0 769 89 0 69 chr2 93721602 93722516 -159534067 + (GCTG)n Simple_repeat Simple_repeat 1 850 0 832 77 0 65 chr2 93722561 93723569 -159533014 + (GCTG)n Simple_repeat Simple_repeat 4 1116 0 795 85 0 69 chr2 93723587 93724214 -159532369 + (GCTG)n Simple_repeat Simple_repeat 1 583 0 682 86 0 69 chr2 93724268 93724829 -159531754 + (GCTG)n Simple_repeat Simple_repeat 1 522 0 840 58 0 63 chr2 93724842 93725033 -159531550 + (GCTG)n Simple_repeat Simple_repeat 2 180 0 814 82 0 57 chr2 93725045 93725421 -159531162 + (GCTG)n Simple_repeat Simple_repeat 4 528 0 620 88 0 70 chr2 93725438 93725714 -159530869 + (GCTG)n Simple_repeat Simple_repeat 1 256 0 713 68 0 68 chr2 93725758 93725949 -159530634 + (GCTG)n Simple_repeat Simple_repeat 1 178 0 676 68 0 73 chr2 93725964 93726155 -159530428 + (GCTG)n Simple_repeat Simple_repeat 2 178 0 832 74 0 64 chr2 93726206 93726584 -159529999 + (GCTG)n Simple_repeat Simple_repeat 2 528 0 335 55 0 77 chr2 93726600 93726691 -159529892 + (GCTG)n Simple_repeat Simple_repeat 4 87 0 760 57 0 72 chr2 93726717 93726910 -159529673 + (GCTG)n Simple_repeat Simple_repeat 2 180 0 21 0 0 0 chr2 93726915 93726936 -159529647 + AT_rich Low_complexity Low_complexity 1 21 0 537 150 4 39 chr2 93727518 93727802 -159528781 + (GCTG)n Simple_repeat Simple_repeat 1 273 0 770 68 0 68 chr2 93727813 93728005 -159528578 + (GCTG)n Simple_repeat Simple_repeat 2 180 0 756 91 0 73 chr2 93728057 93729261 -159527322 + (GCTG)n Simple_repeat Simple_repeat 1 1116 0 686 78 0 72 chr2 93729273 93729582 -159527001 + (GCTG)n Simple_repeat Simple_repeat 1 286 0 557 225 14 7 chr2 93729591 93729729 -159526854 + MLT1D LTR MaLR 366 504 -1 336 256 75 44 chr2 93730483 93730643 -159525940 + MIR3 SINE MIR 3 167 -41 2083 105 17 3 chr2 93731422 93731716 -159524867 + AluSq SINE Alu 1 298 -15 838 266 15 20 chr2 93732632 93732958 -159523625 - MER34C LTR ERV1 -155 430 63 6238 44 0 4 chr2 93733704 93734454 -159522129 + L1PA5 LINE L1 5408 6154 0 263 305 21 0 chr2 93735213 93735308 -159521275 - L2 LINE L2 -1 3312 3216 24 77 0 0 chr2 93736814 93736866 -159519717 + AT_rich Low_complexity Low_complexity 1 52 0 1703 166 10 26 chr2 93737335 93737642 -159518941 - AluSp SINE Alu -11 302 1 1929 142 0 3 chr2 93738014 93738309 -159518274 + AluSx SINE Alu 1 294 -18 211 314 0 0 chr2 93738476 93738546 -159518037 - MIR SINE MIR -8 254 185 3448 178 3 14 chr2 93738861 93739520 -159517063 - L1MA5 LINE L1 -7 6293 5642 2652 201 28 43 chr2 93739522 93739746 -159516837 + L1 LINE L1 3884 4110 -2036 2748 7 3 0 chr2 93739746 93740055 -159516528 + AluYa5 SINE Alu 1 310 -1 2652 201 28 43 chr2 93740055 93740555 -159516028 + L1 LINE L1 4110 4597 -1549 31 26 0 0 chr2 93741197 93741235 -159515348 + AT_rich Low_complexity Low_complexity 1 38 0 393 98 73 0 chr2 93741288 93741370 -159515213 + (CATCT)n Simple_repeat Simple_repeat 5 92 0 361 267 127 86 chr2 93741370 93742128 -159514455 - L1MEd LINE L1 -4876 1243 789 756 108 21 54 chr2 93742143 93742329 -159514254 + (CATCT)n Simple_repeat Simple_repeat 1 180 0 450 267 109 88 chr2 93742335 93743916 -159512667 - L1MEc LINE L1 -4877 1242 782 425 133 82 7 chr2 93743916 93744051 -159512532 + (CATCT)n Simple_repeat Simple_repeat 5 149 0 247 118 65 43 chr2 93744063 93744156 -159512427 + (CATCT)n Simple_repeat Simple_repeat 1 95 0 32 64 0 13 chr2 93744246 93744287 -159512296 + AT_rich Low_complexity Low_complexity 1 41 -36 732 182 23 30 chr2 93744287 93744301 -159512282 - FLAM_C SINE Alu -171 131 118 1348 203 50 17 chr2 93744301 93744602 -159511981 - AluJo SINE Alu -1 311 1 234 0 0 0 chr2 93744602 93744628 -159511955 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 732 182 23 30 chr2 93744628 93744744 -159511839 - FLAM_C SINE Alu -182 120 1 32 64 0 13 chr2 93744744 93744780 -159511803 + AT_rich Low_complexity Low_complexity 41 77 0 243 320 47 0 chr2 93745174 93745302 -159511281 + (CTAGGG)n Simple_repeat Simple_repeat 3 136 0 308 121 0 85 chr2 93745304 93745469 -159511114 + (CAGGG)n Simple_repeat Simple_repeat 5 155 0 285 136 0 85 chr2 93745598 93745774 -159510809 + (CAGGG)n Simple_repeat Simple_repeat 1 161 0 323 180 0 78 chr2 93745825 93746132 -159510451 + (CAGGG)n Simple_repeat Simple_repeat 1 283 0 267 134 0 75 chr2 93746265 93746399 -159510184 + (CAGGG)n Simple_repeat Simple_repeat 1 124 0 254 213 5 80 chr2 93746505 93746693 -159509890 + (CAGAG)n Simple_repeat Simple_repeat 5 178 0 * 357 188 0 81 chr2 93746571 93746757 -159509826 + (CAGGG)n Simple_repeat Simple_repeat 1 171 0 203 119 0 90 chr2 93746862 93746929 -159509654 + (CCCTG)n Simple_repeat Simple_repeat 1 61 0 772 134 0 17 chr2 93746983 93747102 -159509481 - AluJb SINE Alu -179 133 17 380 275 16 77 chr2 93747104 93747286 -159509297 + MIR SINE MIR 92 262 0 360 287 54 0 chr2 93747403 93747570 -159509013 + (CCCTAG)n Simple_repeat Simple_repeat 2 177 0 354 226 75 6 chr2 93747783 93747987 -159508596 + (CTAGGG)n Simple_repeat Simple_repeat 1 218 0 231 144 0 90 chr2 93748017 93748184 -159508399 + (CAGGG)n Simple_repeat Simple_repeat 5 156 0 435 276 40 0 chr2 93748224 93748376 -159508207 + (CTAGGG)n Simple_repeat Simple_repeat 3 160 0 304 302 47 0 chr2 93748407 93748576 -159508007 + (CTAGGG)n Simple_repeat Simple_repeat 3 179 0 319 292 54 6 chr2 93748662 93748830 -159507753 + (CTAGGG)n Simple_repeat Simple_repeat 3 178 0 213 103 0 69 chr2 93748839 93748897 -159507686 + (CAGGG)n Simple_repeat Simple_repeat 1 54 0 295 309 29 29 chr2 93749009 93749184 -159507399 + (CTAGGG)n Simple_repeat Simple_repeat 4 178 0 450 209 51 40 chr2 93749227 93749404 -159507179 + (CTAGGG)n Simple_repeat Simple_repeat 1 179 0 320 261 48 24 chr2 93749464 93749629 -159506954 + (CTAGGG)n Simple_repeat Simple_repeat 1 169 0 * 371 152 0 123 chr2 93749576 93749780 -159506803 + (CAGGG)n Simple_repeat Simple_repeat 1 179 0 * 372 284 43 0 chr2 93749660 93749822 -159506761 + (CTAGGG)n Simple_repeat Simple_repeat 2 170 0 232 159 0 29 chr2 93749823 93749892 -159506691 + (CAGGG)n Simple_repeat Simple_repeat 1 67 0 360 191 0 72 chr2 93749975 93750127 -159506456 + (CAGGG)n Simple_repeat Simple_repeat 1 141 0 398 274 46 0 chr2 93750166 93750319 -159506264 + (CTAGGG)n Simple_repeat Simple_repeat 1 160 0 266 158 0 143 chr2 93750280 93750489 -159506094 + (CAGGG)n Simple_repeat Simple_repeat 1 179 0 * 190 143 41 0 chr2 93750550 93750599 -159505984 + (CTAGGG)n Simple_repeat Simple_repeat 2 52 0 350 191 6 65 chr2 93750695 93751109 -159505474 + (CAGGG)n Simple_repeat Simple_repeat 1 389 0 853 261 105 33 chr2 93751939 93752291 -159504292 - HSREP522 Satellite telomeric -171 377 1 4848 223 68 10 chr2 93752426 93753715 -159502868 + L1 LINE L1 2785 4148 -1998 2701 123 84 2 chr2 93753715 93754179 -159502404 - HSREP522 Satellite telomeric 0 504 3 1711 161 187 13 chr2 93754200 93754816 -159501767 - TAR1 Satellite telomeric -244 1867 1145 186 161 0 0 chr2 93755244 93755275 -159501308 - SUBTEL_sa Satellite Satellite -71 103 73 235 320 70 12 chr2 93755288 93755460 -159501123 - L1MEc LINE L1 -3385 3155 2974 1262 224 22 0 chr2 93755460 93755728 -159500855 - AluJo SINE Alu -38 274 1 1337 234 65 73 chr2 93755812 93756316 -159500267 - LTR53 LTR ERVL 0 519 20 696 234 83 87 chr2 93756327 93757183 -159499400 - L1MEc LINE L1 -3753 2787 1883 21 100 0 0 chr2 93757375 93757445 -159499138 + AT_rich Low_complexity Low_complexity 1 70 0 1993 79 0 19 chr2 93757518 93757784 -159498799 + L1PA8 LINE L1 5906 6166 -6 328 281 110 20 chr2 93758425 93758571 -159498012 - L1M4 LINE L1 -2868 3278 3120 282 322 8 0 chr2 93758647 93758768 -159497815 - L1M4 LINE L1 -3135 3011 2890 382 339 103 37 chr2 93758812 93758949 -159497634 - L1M4 LINE L1 -3128 3018 2891 1831 154 0 3 chr2 93758949 93759247 -159497336 - AluSx SINE Alu -15 297 1 382 339 103 37 chr2 93759247 93759457 -159497126 - L1M4 LINE L1 -3255 2891 2648 195 47 23 47 chr2 93759473 93759516 -159497067 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 743 244 6 0 chr2 93760114 93760282 -159496301 + L1MB3 LINE L1 5659 5827 -356 826 141 16 0 chr2 93760282 93760410 -159496173 - BC200 scRNA scRNA -57 143 14 1241 201 106 0 chr2 93760413 93760697 -159495886 + L1MB3 LINE L1 5798 6111 -72 215 362 13 26 chr2 93761404 93761556 -159495027 + (CGTG)n Simple_repeat Simple_repeat 4 153 0 186 43 0 0 chr2 93761982 93762005 -159494578 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 1003 243 39 0 chr2 93762101 93762381 -159494202 - MER47A DNA MER2_type -66 300 10 207 261 159 0 chr2 93762403 93762472 -159494111 + MIR SINE MIR 64 143 -119 239 360 0 0 chr2 93762494 93762583 -159494000 + (TG)n Simple_repeat Simple_repeat 2 90 0 218 190 0 17 chr2 93762600 93762658 -159493925 + (TG)n Simple_repeat Simple_repeat 2 58 0 2083 102 0 42 chr2 93763876 93764189 -159492394 - AluSg SINE Alu -10 300 1 371 326 0 23 chr2 93764489 93764621 -159491962 + (CA)n Simple_repeat Simple_repeat 1 129 0 184 270 16 16 chr2 93764769 93764832 -159491751 - L2 LINE L2 -6 3266 3204 361 266 117 9 chr2 93765579 93765715 -159490868 - MIR SINE MIR -71 137 37 972 244 98 95 chr2 93768165 93768685 -159487898 - L1ME3A LINE L1 0 6170 5646 429 70 0 0 chr2 93768685 93768742 -159487841 + (TG)n Simple_repeat Simple_repeat 2 58 0 972 244 98 95 chr2 93768742 93768831 -159487752 - L1ME3A LINE L1 -524 5646 5559 491 264 87 5 chr2 93768835 93769043 -159487540 - L1MC4a LINE L1 -1910 5898 5674 327 231 90 32 chr2 93769067 93769223 -159487360 - L1ME4a LINE L1 -1 6120 5956 1785 151 3 13 chr2 93769231 93769530 -159487053 - AluJb SINE Alu -16 296 1 1180 171 0 24 chr2 93770623 93770834 -159485749 - AluJo SINE Alu -22 290 85 191 313 165 34 chr2 93771635 93771811 -159484772 + L2 LINE L2 81 279 -3035 802 158 8 0 chr2 93771996 93772123 -159484460 - FLAM_A SINE Alu -5 128 1 23 0 0 0 chr2 93772701 93772724 -159483859 + AT_rich Low_complexity Low_complexity 1 23 0 198 274 39 0 chr2 93772981 93773032 -159483551 + MIR SINE MIR 45 97 -165 799 122 313 0 chr2 93773054 93773201 -159483382 + MER46A DNA MER2_type 44 236 0 332 271 115 33 chr2 93773206 93773328 -159483255 + MIR SINE MIR 124 255 -7 7210 113 61 14 chr2 93773841 93774992 -159481591 + HSMAR2 DNA Mariner 93 1297 -5 2601 141 19 61 chr2 93774997 93775392 -159481191 - L1MA8 LINE L1 -70 6221 5852 1716 164 3 26 chr2 93775392 93775563 -159481020 - AluJb SINE Alu -8 304 142 1778 102 110 4 chr2 93775563 93775827 -159480756 - AluSp SINE Alu -19 294 3 1716 164 3 26 chr2 93775827 93775966 -159480617 - AluJb SINE Alu -170 142 1 2601 141 19 61 chr2 93775966 93776094 -159480489 - L1MA8 LINE L1 -439 5852 5720 1905 219 27 27 chr2 93776103 93776546 -159480037 + MLT1C LTR MaLR 1 443 -24 2093 124 0 3 chr2 93776559 93776857 -159479726 + AluSg SINE Alu 1 297 -13 5427 60 10 0 chr2 93777040 93777721 -159478862 + L1PA6 LINE L1 5467 6154 0 1929 105 18 0 chr2 93778073 93778349 -159478234 - AluSx SINE Alu -11 301 21 1925 110 11 11 chr2 93778444 93778753 -159477830 + AluSg SINE Alu 1 309 0 521 240 154 0 chr2 93778828 93779003 -159477580 - MLT1J1 LTR MaLR -7 439 238 1715 158 0 34 chr2 93779138 93779460 -159477123 + AluJo SINE Alu 1 311 -1 341 250 83 76 chr2 93779655 93779799 -159476784 + L2 LINE L2 3169 3313 0 462 199 107 38 chr2 93779888 93780019 -159476564 - MER45A DNA AcHobo 0 178 39 220 233 0 58 chr2 93780842 93780945 -159475638 + G-rich Low_complexity Low_complexity 2 98 0 1752 184 13 3 chr2 93782628 93782937 -159473646 - AluJo SINE Alu 0 312 1 263 241 19 143 chr2 93783098 93783253 -159473330 + MIR SINE MIR 28 164 -44 267 245 26 19 chr2 93783778 93783859 -159472724 + CT-rich Low_complexity Low_complexity 4 88 -71 2370 105 0 0 chr2 93783859 93784164 -159472419 - AluSg SINE Alu -5 305 1 267 245 26 19 chr2 93784164 93784237 -159472346 + CT-rich Low_complexity Low_complexity 88 159 0 202 160 40 0 chr2 93784255 93784305 -159472278 + CT-rich Low_complexity Low_complexity 1 52 0 2066 133 0 10 chr2 93784313 93784615 -159471968 - AluSx SINE Alu -13 299 1 370 209 9 19 chr2 93784634 93784739 -159471844 + CT-rich Low_complexity Low_complexity 4 107 0 504 88 44 0 chr2 93784861 93784952 -159471631 + (TCCA)n Simple_repeat Simple_repeat 3 97 0 339 272 18 71 chr2 93784990 93785159 -159471424 - L2 LINE L2 -850 2464 2305 216 234 0 21 chr2 93785322 93785369 -159471214 + MIR SINE MIR 100 145 -63 207 308 62 0 chr2 93785770 93785835 -159470748 + L3 LINE CR1 927 995 -582 493 285 107 8 chr2 93785999 93786290 -159470293 + L2 LINE L2 2985 3313 0 195 162 0 0 chr2 93786301 93786338 -159470245 + (TGGA)n Simple_repeat Simple_repeat 1 37 0 1207 75 20 0 chr2 93786434 93786581 -159470002 + AluSx SINE Alu 1 150 -162 308 277 119 20 chr2 93786598 93786699 -159469884 - L2 LINE L2 -34 3279 3169 1257 142 0 49 chr2 93786894 93787120 -159469463 - AluJo SINE Alu -1 311 97 1024 108 0 0 chr2 93787123 93787309 -159469274 + AluSx SINE Alu 152 337 0 375 360 47 0 chr2 93787322 93787472 -159469111 + L3 LINE CR1 1406 1562 -15 648 249 30 12 chr2 93787656 93787821 -159468762 - MIR SINE MIR 0 262 95 372 256 88 61 chr2 93787821 93788002 -159468581 - L1MC4 LINE L1 -1137 6648 6499 2449 88 0 0 chr2 93788010 93788315 -159468268 - AluY SINE Alu -1 310 6 240 293 44 11 chr2 93788360 93788541 -159468042 - L1MCa LINE L1 -3756 2670 2484 333 305 75 43 chr2 93788570 93788757 -159467826 - L1MCa LINE L1 -3969 2457 2265 2170 112 3 3 chr2 93788803 93789098 -159467485 - AluSq SINE Alu -18 295 1 2049 141 0 7 chr2 93789338 93789678 -159466905 - AluSx SINE Alu 0 312 1 705 256 41 56 chr2 93790006 93790276 -159466307 + L2 LINE L2 3044 3309 -4 337 278 76 7 chr2 93790302 93790446 -159466137 - HAL1b LINE L1 -798 550 397 184 377 0 0 chr2 93790528 93790589 -159465994 + L2 LINE L2 3210 3270 -2 242 277 196 47 chr2 93790676 93790696 -159465887 - MIR3 SINE MIR -36 172 156 1096 183 16 0 chr2 93790696 93790882 -159465701 + MER5A DNA MER1_type 1 189 0 242 277 196 47 chr2 93790882 93791009 -159465574 - MIR3 SINE MIR -52 156 3 1023 136 0 18 chr2 93791649 93791899 -159464684 + AluSx SINE Alu 1 299 -11 376 200 0 0 chr2 93791899 93791969 -159464614 - L1MC3 LINE L1 -14 7771 7702 2061 102 18 3 chr2 93792028 93792311 -159464272 - AluSp SINE Alu -26 287 1 232 304 76 0 chr2 93792443 93792522 -159464061 - L2 LINE L2 -20 3252 3168 21 57 0 0 chr2 93792556 93792591 -159463992 + AT_rich Low_complexity Low_complexity 1 35 0 579 107 0 0 chr2 93792614 93792689 -159463894 - AluJ/FLAM SINE Alu -235 77 3 4294 157 41 38 chr2 93792713 93793596 -159462987 - L1MB3 LINE L1 -2 6181 5298 1973 130 18 0 chr2 93793596 93793880 -159462703 - AluSq SINE Alu -24 289 1 4294 157 41 38 chr2 93793880 93793917 -159462666 - L1MB3 LINE L1 -885 5298 5263 1309 158 16 4 chr2 93793918 93794165 -159462418 + L1MB3 LINE L1 5699 5948 -235 * 1677 237 28 2 chr2 93794164 93794599 -159461984 - L1MB3 LINE L1 -872 5274 4829 544 200 34 63 chr2 93795141 93795316 -159461267 - L1MB8 LINE L1 -5 6173 6004 1373 182 53 10 chr2 93795598 93795900 -159460683 - L1MA9 LINE L1 -39 6273 5959 958 163 17 28 chr2 93795906 93796084 -159460499 - AluJb SINE Alu -1 311 136 734 164 0 61 chr2 93796084 93796249 -159460334 - L1MA9 LINE L1 -344 5968 5814 246 250 0 0 chr2 93796254 93796302 -159460281 - MIR SINE MIR -75 133 86 504 301 75 23 chr2 93796313 93796579 -159460004 + MARNA DNA Mariner 77 356 -230 1877 182 13 29 chr2 93796698 93796855 -159459728 + MLT1B LTR MaLR 1 159 -231 2315 107 7 0 chr2 93796855 93797154 -159459429 - AluSq SINE Alu -12 301 1 1877 182 13 29 chr2 93797154 93797381 -159459202 + MLT1B LTR MaLR 159 379 -11 693 333 59 4 chr2 93797882 93798119 -159458464 + MIR SINE MIR 4 253 -9 304 336 25 8 chr2 93798123 93798245 -159458338 - L2 LINE L2 -521 2793 2670 1553 179 20 0 chr2 93798910 93799212 -159457371 - L1MB2 LINE L1 -25 6146 5839 525 232 57 62 chr2 93800056 93800233 -159456350 + MIR3 SINE MIR 30 205 -3 571 313 52 43 chr2 93800393 93800494 -159456089 - MIR SINE MIR 0 262 163 441 95 0 0 chr2 93800494 93800557 -159456026 + (TA)n Simple_repeat Simple_repeat 1 63 0 2283 114 0 0 chr2 93800559 93800858 -159455725 - AluSg SINE Alu -11 299 1 571 313 52 43 chr2 93800858 93800986 -159455597 - MIR SINE MIR -99 163 28 220 224 94 47 chr2 93800970 93801055 -159455528 + MIR3 SINE MIR 113 201 -7 * 1616 188 3 19 chr2 93801151 93801460 -159455123 + AluJo SINE Alu 6 309 -3 2314 92 3 3 chr2 93801514 93801808 -159454775 - AluY SINE Alu -17 294 1 1857 164 7 0 chr2 93802306 93802605 -159453978 + AluSx SINE Alu 1 301 -11 251 279 13 0 chr2 93802654 93802733 -159453850 - L1MB2 LINE L1 -307 5814 5735 408 20 0 0 chr2 93802734 93802783 -159453800 + (TC)n Simple_repeat Simple_repeat 1 49 0 219 36 0 0 chr2 93802782 93802810 -159453773 + (CA)n Simple_repeat Simple_repeat 1 28 0 * 2101 120 7 10 chr2 93802822 93803121 -159453462 - AluSx SINE Alu -14 298 1 438 238 7 53 chr2 93803455 93803606 -159452977 - L1ME4a LINE L1 -16 6105 5962 191 88 29 0 chr2 93803623 93803657 -159452926 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 2378 150 21 28 chr2 93804915 93805288 -159451295 - L1PA16 LINE L1 -13 6153 5782 1807 165 0 59 chr2 93805288 93805468 -159451115 - AluJo SINE Alu -9 303 149 2008 130 31 17 chr2 93805468 93805760 -159450823 - AluSq SINE Alu -17 296 1 1807 165 0 59 chr2 93805760 93805901 -159450682 - AluJo SINE Alu -163 149 1 2378 150 21 28 chr2 93805901 93805960 -159450623 - L1PA16 LINE L1 -384 5782 5724 393 282 65 24 chr2 93806041 93806165 -159450418 - L2 LINE L2 -8 3264 3136 414 311 56 30 chr2 93806283 93806550 -159450033 - MLT1J LTR MaLR -1 510 237 463 304 82 57 chr2 93806696 93807123 -159449460 - L2 LINE L2 -264 3008 2553 282 270 95 14 chr2 93807621 93807695 -159448888 - L2 LINE L2 -5 3267 3188 2014 139 0 3 chr2 93807854 93808141 -159448442 - AluSx SINE Alu -26 286 1 185 319 181 0 chr2 93808862 93808978 -159447605 - L2 LINE L2 -475 2839 2703 1378 190 68 0 chr2 93808989 93809310 -159447273 - L1MB3 LINE L1 -2 6181 5839 281 274 20 20 chr2 93809426 93809528 -159447055 - L2 LINE L2 -922 2392 2291 1323 266 112 2 chr2 93809613 93810042 -159446541 - MLT1H1 LTR MaLR -66 489 14 205 303 0 30 chr2 93810080 93810146 -159446437 + CT-rich Low_complexity Low_complexity 1 64 0 1114 275 167 43 chr2 93810146 93811265 -159445318 - L2 LINE L2 -5 3308 2036 1700 145 31 13 chr2 93811296 93811540 -159445043 + MER2 DNA MER2_type 22 275 -70 2125 121 9 16 chr2 93811540 93811855 -159444728 - AluSq SINE Alu 0 313 1 1700 145 31 13 chr2 93811855 93811928 -159444655 + MER2 DNA MER2_type 275 345 0 1499 262 92 41 chr2 93811974 93812538 -159444045 - MLT1E LTR MaLR 0 593 1 253 246 115 0 chr2 93812692 93812794 -159443789 - MIR SINE MIR -38 224 109 578 304 73 32 chr2 93813838 93814361 -159442222 - L1ME4a LINE L1 0 6121 5578 29 0 0 0 chr2 93814393 93814422 -159442161 + AT_rich Low_complexity Low_complexity 1 29 0 298 161 48 32 chr2 93814617 93814679 -159441904 + MER20 DNA MER1_type 5 67 -152 33 0 0 0 chr2 93814679 93814712 -159441871 + AT_rich Low_complexity Low_complexity 1 33 0 838 244 9 0 chr2 93814719 93814932 -159441651 - L1MA4 LINE L1 -15 6285 6071 364 158 85 0 chr2 93814957 93815039 -159441544 + MER20 DNA MER1_type 119 207 -12 1635 183 6 32 chr2 93815099 93815411 -159441172 + AluJo SINE Alu 1 304 -8 2240 130 0 0 chr2 93815427 93815727 -159440856 - AluSq SINE Alu -13 300 1 358 299 88 7 chr2 93815852 93815989 -159440594 - MER5A DNA MER1_type -4 185 38 279 226 15 88 chr2 93816099 93816236 -159440347 - L1MB3 LINE L1 -319 5802 5676 823 299 111 12 chr2 93816672 93817238 -159439345 + L1ME3A LINE L1 5341 5962 -208 1708 184 22 30 chr2 93817797 93818162 -159438421 + MLT1A1 LTR MaLR 1 362 -3 260 301 48 0 chr2 93818324 93818407 -159438176 - MER91B DNA MER1_type 0 190 104 288 246 42 149 chr2 93819540 93819606 -159436977 + L2 LINE L2 2702 2773 -541 2324 97 0 0 chr2 93819606 93819896 -159436687 - AluSq SINE Alu -23 290 1 288 246 42 149 chr2 93819896 93820117 -159436466 + L2 LINE L2 2773 2958 -356 488 208 231 0 chr2 93820945 93820988 -159435595 + MER58C DNA MER1_type 56 88 -2332 216 0 0 0 chr2 93820988 93821012 -159435571 + (TC)n Simple_repeat Simple_repeat 1 24 0 * 360 0 0 0 chr2 93821011 93821051 -159435532 + (CA)n Simple_repeat Simple_repeat 1 40 0 488 208 231 0 chr2 93821012 93821137 -159435446 + MER58C DNA MER1_type 88 215 0 638 309 98 6 chr2 93821138 93821453 -159435130 + MLT1L LTR MaLR 218 561 -54 902 194 94 15 chr2 93821453 93821654 -159434929 - MER58A DNA MER1_type 0 224 8 1447 200 131 45 chr2 93822691 93823140 -159433443 + MLT1D LTR MaLR 1 488 -17 2612 122 47 31 chr2 93823203 93823522 -159433061 + L1MA2 LINE L1 5847 6177 -127 2302 109 0 10 chr2 93823522 93823835 -159432748 + AluY SINE Alu 2 311 0 2612 122 47 31 chr2 93823835 93823966 -159432617 + L1MA2 LINE L1 6177 6304 0 192 97 0 0 chr2 93823973 93824004 -159432579 + (A)n Simple_repeat Simple_repeat 1 31 0 395 289 207 4 chr2 93824185 93824431 -159432152 + L2 LINE L2 2065 2360 -954 3034 155 133 13 chr2 93824545 93825176 -159431407 + MER39 LTR ERV1 1 707 0 620 294 82 78 chr2 93825177 93825884 -159430699 + L2 LINE L2 2487 3213 -59 1507 177 65 4 chr2 93825944 93826100 -159430483 - AluJo SINE Alu -18 294 149 189 0 0 0 chr2 93826100 93826121 -159430462 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 1507 177 65 4 chr2 93826121 93826241 -159430342 - AluJo SINE Alu -163 149 1 198 0 0 0 chr2 93826386 93826408 -159430175 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 193 309 124 41 chr2 93826543 93826640 -159429943 + L2 LINE L2 3151 3255 -17 640 274 113 81 chr2 93826644 93827227 -159429356 + MLT1L LTR MaLR 1 602 -13 3530 207 108 55 chr2 93827230 93828438 -159428145 - L1MC4 LINE L1 -1 8041 6770 228 294 81 22 chr2 93828699 93828835 -159427748 - MLT1J2 LTR MaLR -240 210 67 334 313 75 80 chr2 93829164 93829628 -159426955 - L2 LINE L2 -339 2975 2514 263 206 63 0 chr2 93829965 93830028 -159426555 + MLT1I LTR MaLR 317 383 -26 550 270 79 0 chr2 93830083 93830261 -159426322 - MIR SINE MIR -70 192 1 201 234 0 0 chr2 93830433 93830480 -159426103 + C-rich Low_complexity Low_complexity 3 49 0 1819 122 17 17 chr2 93831184 93831478 -159425105 - AluSx SINE Alu -18 294 1 298 316 86 13 chr2 93831542 93831694 -159424889 + L2 LINE L2 2898 3060 -212 343 220 0 28 chr2 93831886 93831995 -159424588 + CT-rich Low_complexity Low_complexity 2 107 0 577 243 110 74 chr2 93832304 93832613 -159423970 - MLT1H1 LTR MaLR -177 378 59 1799 155 108 45 chr2 93832645 93833045 -159423538 + MSTB LTR MaLR 1 425 -1 247 235 153 20 chr2 93833150 93833248 -159423335 - MLT1J2 LTR MaLR -258 192 82 638 295 128 27 chr2 93834046 93834460 -159422123 + L2 LINE L2 2824 3279 -34 447 125 0 0 chr2 93834534 93834606 -159421977 - AluS SINE Alu -10 299 228 320 310 96 78 chr2 93834884 93835155 -159421428 - L2 LINE L2 -1 3271 2996 390 42 0 0 chr2 93835285 93835333 -159421250 + (TTCC)n Simple_repeat Simple_repeat 1 48 0 1491 135 55 47 chr2 93835348 93835622 -159420961 - AluSx SINE Alu -36 276 1 424 252 33 60 chr2 93835963 93836005 -159420578 - MIR SINE MIR -45 217 175 1378 130 202 0 chr2 93836005 93836258 -159420325 - AluSg1 SINE Alu -5 304 1 424 252 33 60 chr2 93836258 93836366 -159420217 - MIR SINE MIR -87 175 71 2094 117 3 0 chr2 93836611 93836910 -159419673 - AluY SINE Alu -11 300 1 261 0 0 0 chr2 93836935 93836964 -159419619 + (TC)n Simple_repeat Simple_repeat 2 30 0 252 359 22 0 chr2 93836964 93837056 -159419527 + L2 LINE L2 3220 3313 0 1673 164 11 4 chr2 93837137 93837417 -159419166 - AluSx SINE Alu -30 282 1 300 363 0 20 chr2 93837518 93837620 -159418963 + L2 LINE L2 3141 3240 -32 834 199 23 11 chr2 93837654 93837830 -159418753 + MER20 DNA MER1_type 42 219 0 2029 115 0 7 chr2 93838180 93838468 -159418115 + AluSx SINE Alu 1 286 -26 1772 109 94 0 chr2 93838612 93838879 -159417704 + AluSq SINE Alu 1 292 -21 1352 208 17 31 chr2 93839435 93839588 -159416995 - AluJo SINE Alu -23 289 140 2003 128 3 13 chr2 93839588 93839900 -159416683 - AluSg SINE Alu -1 309 1 1352 208 17 31 chr2 93839900 93840039 -159416544 - AluJo SINE Alu -172 140 1 2247 92 0 0 chr2 93840047 93840342 -159416241 - AluSc SINE Alu -14 295 1 1247 236 121 59 chr2 93840397 93840926 -159415657 - MER68 LTR ERV1 0 562 1 3017 244 102 42 chr2 93841146 93841467 -159415116 - L1MEc LINE L1 -3922 2474 2174 1424 184 37 0 chr2 93841467 93841738 -159414845 - AluJo SINE Alu -31 281 1 2268 98 0 0 chr2 93841746 93842052 -159414531 - AluSc SINE Alu -3 306 1 3017 244 102 42 chr2 93842052 93843321 -159413262 - L1MEc LINE L1 -4228 2168 780 188 226 16 0 chr2 93844341 93844354 -159412229 + A-rich Low_complexity Low_complexity 2 13 -51 2218 83 10 13 chr2 93844354 93844667 -159411916 + AluSp SINE Alu 1 312 -1 188 226 16 0 chr2 93844667 93844685 -159411898 + A-rich Low_complexity Low_complexity 13 29 -35 1460 219 0 16 chr2 93844685 93845000 -159411583 + AluJb SINE Alu 1 310 -2 188 226 16 0 chr2 93845000 93845029 -159411554 + A-rich Low_complexity Low_complexity 29 64 0 1863 154 0 16 chr2 93845445 93845756 -159410827 + AluSx SINE Alu 1 306 -6 195 263 0 0 chr2 93845828 93845866 -159410717 + MIR SINE MIR 51 88 -174 24 0 0 0 chr2 93846168 93846192 -159410391 + AT_rich Low_complexity Low_complexity 1 24 0 1854 120 13 35 chr2 93846291 93846607 -159409976 - AluSc SINE Alu 0 309 1 3215 164 10 5 chr2 93851710 93852302 -159404281 + TAR1 Satellite telomeric 1474 2068 -43 429 141 11 54 chr2 93852467 93852652 -159403931 + (TTAGGG)n Simple_repeat Simple_repeat 1 177 0 10264 200 36 30 chr2 93852666 93853399 -159403184 - L1PBa LINE L1 -927 5935 5208 1104 152 0 0 chr2 93853399 93853577 -159403006 - AluSp SINE Alu 0 313 136 10264 200 36 30 chr2 93853577 93856829 -159399754 - L1PBa LINE L1 -1654 5208 1709 180 0 0 0 chr2 93856829 93856849 -159399734 + (TTA)n Simple_repeat Simple_repeat 2 21 0 10264 200 36 30 chr2 93856849 93857575 -159399008 - L1PBa LINE L1 -5153 1709 989 182 325 114 16 chr2 93858916 93859039 -159397544 - L3 LINE CR1 -175 1402 1268 436 222 0 0 chr2 93859365 93859446 -159397137 + LTR16B LTR ERVL 116 196 -268 1652 193 16 63 chr2 93859947 93860330 -159396253 + MLT1A1 LTR MaLR 1 365 0 318 321 30 22 chr2 93860670 93860804 -159395779 - MIR SINE MIR -108 154 20 289 250 21 31 chr2 93860815 93860911 -159395672 + MIR3 SINE MIR 108 202 -6 291 261 0 34 chr2 93861547 93861635 -159394948 - L2 LINE L2 0 3272 3188 456 134 61 12 chr2 93861679 93861761 -159394822 + AluJ/FRAM SINE Alu 214 299 -13 453 315 64 47 chr2 93862139 93862325 -159394258 + MIR SINE MIR 5 194 -62 501 242 89 97 chr2 93862526 93862887 -159393696 + MLT1I LTR MaLR 1 390 -148 296 306 48 8 chr2 93862858 93862982 -159393601 + MLT1I LTR MaLR 281 409 0 * 456 279 31 0 chr2 93862992 93863121 -159393462 - MIR SINE MIR -14 248 116 762 251 17 30 chr2 93863459 93863675 -159392908 + MIR SINE MIR 40 250 -12 305 270 26 105 chr2 93864170 93864248 -159392335 + MIR SINE MIR 122 184 -78 2127 103 7 10 chr2 93864248 93864558 -159392025 + AluSc SINE Alu 1 309 0 305 270 26 105 chr2 93864558 93864631 -159391952 + MIR SINE MIR 184 261 -1 492 302 27 13 chr2 93864958 93865107 -159391476 + MIR SINE MIR 37 187 -75 2016 95 10 36 chr2 93865110 93865415 -159391168 + AluSq SINE Alu 1 297 -16 449 249 124 18 chr2 93866186 93866355 -159390228 + MIR3 SINE MIR 5 191 -17 1665 65 5 0 chr2 93866484 93866699 -159389884 + AluSp SINE Alu 91 306 -7 622 138 11 0 chr2 93866710 93866797 -159389786 + 5S rRNA rRNA 3 90 -31 1483 192 0 52 chr2 93867080 93867408 -159389175 + AluJo SINE Alu 1 311 -1 1695 254 81 36 chr2 93867634 93868193 -159388390 - MLT1E LTR MaLR 0 593 10 608 239 58 94 chr2 93868200 93868476 -159388107 - MLT1E-int LTR MaLR 0 1371 1106 207 205 0 0 chr2 93868543 93868582 -159388001 - L2 LINE L2 0 3313 3275 376 311 62 19 chr2 93868963 93869124 -159387459 - MER5B DNA MER1_type -2 176 9 330 326 31 26 chr2 93869142 93869335 -159387248 - MER117 DNA MER1_type -3 194 1 199 323 137 25 chr2 93869401 93869562 -159387021 + L3 LINE CR1 1043 1221 -356 410 327 127 0 chr2 93869659 93869824 -159386759 + MIR SINE MIR 53 238 -24 1783 219 35 44 chr2 93870644 93871077 -159385506 + L1MC4 LINE L1 6586 7014 -1028 567 211 157 33 chr2 93871249 93871288 -159385295 + L1MC4 LINE L1 7014 7047 -948 1682 157 3 26 chr2 93871288 93871593 -159384990 + AluJo SINE Alu 1 298 -14 567 211 157 33 chr2 93871593 93872425 -159384158 + L1MC4 LINE L1 7047 7994 -1 525 205 43 77 chr2 93872439 93872556 -159384027 + MLT1F1 LTR MaLR 13 127 -440 305 262 117 39 chr2 93872655 93872758 -159383825 - MIR SINE MIR -118 144 34 474 264 72 60 chr2 93872764 93872816 -159383767 + MIR SINE MIR 3 53 -209 770 205 107 39 chr2 93872816 93873021 -159383562 - MER20 DNA MER1_type 0 219 1 474 264 72 60 chr2 93873021 93873179 -159383404 + MIR SINE MIR 53 214 -48 846 251 27 0 chr2 93873404 93873591 -159382992 + MIR SINE MIR 13 204 -58 771 304 76 65 chr2 93873658 93874118 -159382465 + L2 LINE L2 2843 3307 -6 233 279 172 0 chr2 93874363 93874485 -159382098 - MER103 DNA DNA -20 146 4 310 274 0 75 chr2 93874533 93874639 -159381944 - MIR3 SINE MIR -48 160 63 296 242 44 55 chr2 93874809 93874900 -159381683 - L2 LINE L2 -2 3311 3222 21 0 0 0 chr2 93876030 93876051 -159380532 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 93878183 93878212 -159378371 + GC_rich Low_complexity Low_complexity 1 29 0 271 277 101 40 chr2 93878472 93878620 -159377963 + MIR SINE MIR 13 169 -93 212 291 80 33 chr2 93879303 93879454 -159377129 + L2 LINE L2 2327 2484 -830 1341 112 11 0 chr2 93879708 93879896 -159376687 + AluY SINE Alu 119 308 -3 189 107 0 0 chr2 93879931 93879959 -159376624 + (GAAAA)n Simple_repeat Simple_repeat 4 31 0 5569 175 43 43 chr2 93880162 93880593 -159375990 + L1MA9 LINE L1 4038 4468 -1844 2199 102 0 23 chr2 93880593 93880898 -159375685 + AluSx SINE Alu 1 298 -14 5569 175 43 43 chr2 93880898 93882230 -159374353 + L1MA9 LINE L1 4468 5808 -504 820 213 30 25 chr2 93882230 93882432 -159374151 + MER6B DNA MER2_type 4 206 -4 5569 175 43 43 chr2 93882432 93882899 -159373684 + L1MA9 LINE L1 5808 6274 -38 256 198 28 99 chr2 93883014 93883075 -159373508 + L1ME LINE L1 5670 5734 -428 2628 48 0 3 chr2 93883075 93883386 -159373197 + AluY SINE Alu 1 310 -1 256 198 28 99 chr2 93883386 93883492 -159373091 + L1ME LINE L1 5734 5826 -336 252 0 0 0 chr2 93883532 93883560 -159373023 + (CA)n Simple_repeat Simple_repeat 2 29 0 2201 102 7 0 chr2 93886000 93886294 -159370289 - AluSx SINE Alu -16 296 1 837 298 119 37 chr2 93886306 93886793 -159369790 + L2 LINE L2 2579 3127 -186 2168 131 0 0 chr2 93886793 93887090 -159369493 - AluSx SINE Alu -15 297 1 837 298 119 37 chr2 93887090 93887282 -159369301 + L2 LINE L2 3127 3302 -11 793 181 0 0 chr2 93887289 93887422 -159369161 + FLAM_A SINE Alu 1 133 0 1527 196 0 4 chr2 93887577 93887858 -159368725 + AluJb SINE Alu 28 307 -5 2072 107 0 10 chr2 93888800 93889090 -159367493 + AluY SINE Alu 1 287 -24 24 0 0 0 chr2 93889461 93889485 -159367098 + AT_rich Low_complexity Low_complexity 1 24 0 2065 105 0 21 chr2 93891339 93891624 -159364959 + AluSc SINE Alu 5 283 -26 270 0 0 0 chr2 93891628 93891658 -159364925 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 191 289 19 0 chr2 93892569 93892621 -159363962 - L2 LINE L2 -7 3265 3213 667 277 183 32 chr2 93893172 93894064 -159362519 + HAL1 LINE L1 1404 2450 -57 2084 138 3 0 chr2 93894064 93894361 -159362222 - AluSx SINE Alu -14 298 1 667 277 183 32 chr2 93894361 93894418 -159362165 + HAL1 LINE L1 2450 2497 -10 752 248 41 28 chr2 93894519 93894737 -159361846 - MER58A DNA MER1_type 0 224 4 334 356 51 8 chr2 93894870 93895106 -159361477 + L2 LINE L2 1805 2050 -1264 563 277 122 27 chr2 93895288 93895584 -159360999 + L1MEc LINE L1 107 430 -5966 399 273 48 6 chr2 93895832 93895997 -159360586 + Charlie1 DNA MER1_type 54 225 -2536 455 189 31 16 chr2 93895999 93896126 -159360457 + Charlie1 DNA MER1_type 2627 2755 -6 251 208 0 0 chr2 93898488 93898536 -159358047 + MER33 DNA MER1_type 51 98 -226 566 135 22 135 chr2 93898550 93898637 -159357946 + MER33 DNA MER1_type 205 264 -2360 1650 110 8 8 chr2 93898637 93898874 -159357709 - AluSq SINE Alu -21 292 56 566 135 22 135 chr2 93898874 93898964 -159357619 + MER33 DNA MER1_type 264 362 -1 2316 125 0 0 chr2 93899307 93899619 -159356964 + AluSx SINE Alu 1 312 0 2250 88 0 3 chr2 93899707 93900022 -159356561 - AluY SINE Alu 0 314 1 332 310 44 32 chr2 93900111 93900269 -159356314 + L1MC4a LINE L1 5742 5901 -1907 336 132 66 26 chr2 93900335 93900411 -159356172 - MER116 DNA Mariner -1 79 1 21 0 0 0 chr2 93901045 93901066 -159355517 + AT_rich Low_complexity Low_complexity 1 21 0 1539 223 56 48 chr2 93901284 93901695 -159354888 + L1M4 LINE L1 3076 3482 -2664 1646 131 45 4 chr2 93901695 93901940 -159354643 + AluSx SINE Alu 1 255 -57 2180 114 6 28 chr2 93901940 93902257 -159354326 + AluSq SINE Alu 3 312 -1 1539 223 56 48 chr2 93902257 93902467 -159354116 + L1M4 LINE L1 3481 3703 -2443 1609 179 69 7 chr2 93902469 93902759 -159353824 + AluJo SINE Alu 5 312 0 690 248 117 28 chr2 93902779 93903135 -159353448 + L1ME1 LINE L1 5776 6160 -6 577 218 188 12 chr2 93904193 93904358 -159352225 - MIR SINE MIR 0 262 69 854 218 0 0 chr2 93904558 93904714 -159351869 - FRAM SINE Alu -20 156 1 1995 117 3 20 chr2 93905340 93905669 -159350914 - AluSx SINE Alu 0 312 1 219 326 163 20 chr2 93907820 93908121 -159348462 + L2 LINE L2 1179 1522 -1792 938 302 178 27 chr2 93908193 93908967 -159347616 + L2 LINE L2 2027 2917 -397 2213 118 0 3 chr2 93909041 93909346 -159347237 - AluSx SINE Alu -8 304 1 903 224 35 45 chr2 93909795 93910081 -159346502 - MER31B LTR ERV1 -183 283 1 30 45 0 0 chr2 93910178 93910222 -159346361 + AT_rich Low_complexity Low_complexity 1 44 0 1039 168 9 39 chr2 93911312 93911544 -159345039 + Tigger1 DNA MER2_type 14 238 -2180 683 78 0 0 chr2 93911545 93911635 -159344948 + AluY SINE Alu 207 296 -15 21 36 0 0 chr2 93913506 93913534 -159343049 + AT_rich Low_complexity Low_complexity 1 28 0 541 310 122 31 chr2 93913838 93914222 -159342361 + MER20B DNA MER1_type 92 510 -273 315 71 0 0 chr2 93914226 93914268 -159342315 + (CA)n Simple_repeat Simple_repeat 2 43 0 813 298 34 29 chr2 93914304 93914714 -159341869 - MER92A LTR ERV1 0 412 1 261 293 48 48 chr2 93915972 93916139 -159340444 + MIR3 SINE MIR 30 196 -12 367 262 48 0 chr2 93916142 93916253 -159340330 - MIR SINE MIR -63 145 48 1351 83 25 0 chr2 93916373 93916577 -159340006 - THE1-int LTR MaLR -1303 277 69 1220 107 65 0 chr2 93916577 93916746 -159339837 - AluSx SINE Alu -132 180 1 340 213 111 9 chr2 93918286 93918394 -159338189 - L1M4 LINE L1 -1530 4616 4498 1038 236 140 11 chr2 93918413 93918863 -159337720 - L1MC4 LINE L1 -1983 5993 5486 1186 236 115 41 chr2 93918866 93919577 -159337006 - L1MC4 LINE L1 -2665 3415 2652 225 299 65 0 chr2 93919596 93919703 -159336880 - L1MC4 LINE L1 -5906 164 51 1746 190 10 0 chr2 93919762 93920057 -159336526 - AluJb SINE Alu -14 298 1 359 263 47 94 chr2 93920089 93920423 -159336160 - L1M4 LINE L1 -2431 3715 3400 2070 164 0 0 chr2 93920423 93920728 -159335855 + AluJb SINE Alu 3 307 -5 359 263 47 94 chr2 93920728 93920777 -159335806 - L1M4 LINE L1 -2746 3400 3350 2012 154 0 0 chr2 93920790 93921083 -159335500 - AluJb SINE Alu -19 293 1 898 216 0 0 chr2 93921222 93921389 -159335194 + AluJb SINE Alu 134 300 -12 1692 95 0 0 chr2 93921533 93921755 -159334828 - AluSc SINE Alu 0 309 88 271 146 0 0 chr2 93921757 93921798 -159334785 - AluSc SINE Alu -260 41 1 486 270 40 13 chr2 93921831 93921983 -159334600 + MIR SINE MIR 103 258 -4 412 270 66 0 chr2 93922394 93922531 -159334052 + MIR SINE MIR 81 226 -36 771 186 18 18 chr2 93923566 93923733 -159332850 - MLT1F1 LTR MaLR -3 564 398 1842 169 0 20 chr2 93923738 93923850 -159332733 + AluJo SINE Alu 1 114 -198 2662 135 34 5 chr2 93923850 93924266 -159332317 - MSTA LTR MaLR 0 428 1 1842 169 0 20 chr2 93924266 93924455 -159332128 + AluJo SINE Alu 114 296 -16 564 164 99 45 chr2 93924460 93924698 -159331885 - MLT1F1 LTR MaLR -164 378 78 * 982 268 50 57 chr2 93924696 93925114 -159331469 - MER21B LTR ERV1 -434 429 15 313 289 39 0 chr2 93925182 93925286 -159331297 - L1ME4a LINE L1 -1 6120 6013 504 209 135 47 chr2 93926139 93926287 -159330296 + MER5B DNA MER1_type 15 175 -3 633 182 0 0 chr2 93926492 93926602 -159329981 - Tigger3(Golem) DNA MER2_type -1 3028 2919 365 224 40 0 chr2 93926729 93926805 -159329778 - Tigger3(Golem) DNA MER2_type -2949 80 2 933 239 62 21 chr2 93927424 93927667 -159328916 - MIR SINE MIR -5 257 5 340 277 0 92 chr2 93927657 93927787 -159328796 - MIR SINE MIR -64 144 27 * 21 0 0 0 chr2 93928572 93928593 -159327990 + AT_rich Low_complexity Low_complexity 1 21 0 369 0 0 0 chr2 93929888 93929929 -159326654 + (TG)n Simple_repeat Simple_repeat 1 41 0 1116 91 65 0 chr2 93929929 93930083 -159326500 - AluSp SINE Alu -33 280 117 783 311 82 33 chr2 93930130 93930564 -159326019 - L1MEd LINE L1 -5284 835 373 2060 132 0 10 chr2 93930564 93930890 -159325693 - AluSq SINE Alu 0 313 1 783 311 82 33 chr2 93930890 93930943 -159325640 - L1MEd LINE L1 -5746 373 324 2271 116 3 0 chr2 93931611 93931921 -159324662 - AluSx SINE Alu -1 311 1 240 35 0 0 chr2 93932478 93932507 -159324076 + (TG)n Simple_repeat Simple_repeat 2 30 0 29 0 0 0 chr2 93932573 93932602 -159323981 + AT_rich Low_complexity Low_complexity 1 29 0 2716 154 43 2 chr2 93932651 93933118 -159323465 - L1PA16 LINE L1 -20 6146 5661 856 186 154 14 chr2 93933119 93933247 -159323336 - L1 LINE L1 -2310 3836 3727 402 21 0 0 chr2 93933247 93933294 -159323289 + (TG)n Simple_repeat Simple_repeat 1 47 0 856 186 154 14 chr2 93933294 93933385 -159323198 - L1 LINE L1 -2419 3727 3586 3329 139 21 2 chr2 93933427 93933958 -159322625 + MER6 DNA MER2_type 324 864 -1 1477 175 86 0 chr2 93933991 93934260 -159322323 + AluJo SINE Alu 1 292 -20 245 305 237 24 chr2 93934419 93934668 -159321915 + L2 LINE L2 2597 2898 -416 1246 126 0 6 chr2 93935156 93935338 -159321245 + AluSg/x SINE Alu 124 304 -6 24 32 0 0 chr2 93935870 93935901 -159320682 + AT_rich Low_complexity Low_complexity 1 31 0 198 103 0 0 chr2 93936564 93936593 -159319990 + (TA)n Simple_repeat Simple_repeat 2 30 0 185 266 105 89 chr2 93936635 93936883 -159319700 + L2 LINE L2 1686 1937 -1377 2954 128 14 7 chr2 93937023 93937468 -159319115 - L1PA15 LINE L1 0 6165 5718 2589 101 3 41 chr2 93937468 93937854 -159318729 - L1PB1 LINE L1 -3 6148 5776 229 269 30 0 chr2 93937854 93937921 -159318662 - L1MC4 LINE L1 -1359 6683 6615 200 325 0 16 chr2 93937927 93938053 -159318530 + (TATATG)n Simple_repeat Simple_repeat 5 128 0 6240 159 23 22 chr2 93938057 93939840 -159316743 - L1P5 LINE L1 -360 5791 4012 904 169 0 0 chr2 93939840 93939988 -159316595 - AluSg/x SINE Alu -1 311 164 14240 215 26 51 chr2 93939992 93943744 -159312839 - L1P4 LINE L1 -650 6166 2319 2311 95 3 0 chr2 93943744 93944040 -159312543 - AluSc SINE Alu -12 297 1 14240 215 26 51 chr2 93944040 93944069 -159312514 - L1P4 LINE L1 -4497 2319 2291 2065 144 0 0 chr2 93944069 93944367 -159312216 + AluSg SINE Alu 1 298 -12 14240 215 26 51 chr2 93944367 93945563 -159311020 - L1P4 LINE L1 -4525 2291 1280 604 289 97 33 chr2 93945832 93946355 -159310228 - L1MC4 LINE L1 -514 5607 5293 533 286 158 44 chr2 93946562 93946711 -159309872 - L1MC4 LINE L1 -951 5195 5064 1423 152 148 0 chr2 93946711 93946968 -159309615 - AluSg SINE Alu -15 295 1 533 286 158 44 chr2 93946968 93947413 -159309170 - L1MC4 LINE L1 -1082 5064 4533 1090 141 0 0 chr2 93947414 93947570 -159309013 + AluSq SINE Alu 1 156 -157 22 0 0 0 chr2 93947635 93947657 -159308926 + AT_rich Low_complexity Low_complexity 1 22 0 868 211 284 11 chr2 93947740 93948025 -159308558 + MLT1F LTR MaLR 180 542 0 202 205 0 0 chr2 93948026 93948065 -159308518 + MER5B DNA MER1_type 140 178 0 391 237 146 88 chr2 93948065 93948373 -159308210 - LTR16A1 LTR ERVL -127 330 5 361 75 75 0 chr2 93950106 93950173 -159306410 + CT-rich Low_complexity Low_complexity 4 75 0 2270 98 0 7 chr2 93950229 93950536 -159306047 - AluY SINE Alu -6 305 1 31 0 0 24 chr2 93950743 93950772 -159305811 + AT_rich Low_complexity Low_complexity 1 30 -11 1949 108 61 14 chr2 93950772 93951049 -159305534 + AluSx SINE Alu 1 290 -22 31 0 0 24 chr2 93951049 93951061 -159305522 + AT_rich Low_complexity Low_complexity 30 41 0 450 274 174 34 chr2 93951064 93951444 -159305139 - L1ME LINE L1 -406 5715 5283 1932 145 7 3 chr2 93951657 93951954 -159304629 + AluSx SINE Alu 1 298 -14 226 184 81 0 chr2 93952067 93952124 -159304459 - MIR SINE MIR -60 148 86 1610 157 0 16 chr2 93953413 93953668 -159302915 - AluSg SINE Alu -59 251 1 28 0 0 0 chr2 93954210 93954238 -159302345 + GC_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr2 93954368 93954391 -159302192 + GC_rich Low_complexity Low_complexity 1 23 0 409 111 0 16 chr2 93954622 93954685 -159301898 + Alu SINE Alu 240 301 -10 1313 145 0 10 chr2 93954687 93954894 -159301689 + AluSg/x SINE Alu 84 288 -22 335 99 0 10 chr2 93954897 93954960 -159301623 + Alu SINE Alu 246 298 -4 951 173 0 17 chr2 93954963 93955142 -159301441 + AluSg/x SINE Alu 84 259 -53 185 169 8 57 chr2 93955148 93955272 -159301311 + (CAGC)n Simple_repeat Simple_repeat 2 119 0 1323 123 0 10 chr2 93955741 93955936 -159300647 - AluSg/x SINE Alu -38 272 80 358 107 0 0 chr2 93955936 93955992 -159300591 - Alu SINE Alu -1 299 244 1395 126 0 19 chr2 93955992 93956207 -159300376 - AluSg/x SINE Alu -19 293 83 1560 114 4 9 chr2 93956207 93956434 -159300149 - AluSg/x SINE Alu -5 307 82 1504 138 0 9 chr2 93956435 93956660 -159299923 - AluSg/x SINE Alu -8 304 82 1584 114 0 9 chr2 93956660 93956886 -159299697 - AluSg/x SINE Alu -6 306 82 302 148 0 0 chr2 93956895 93956949 -159299634 - Alu SINE Alu 0 302 249 1295 171 0 5 chr2 93956949 93957165 -159299418 - AluSg/x SINE Alu -16 296 82 * 1386 130 0 27 chr2 93957164 93957330 -159299253 - AluSg/x SINE Alu -12 300 140 2204 109 0 0 chr2 93957330 93957624 -159298959 - AluSc SINE Alu -15 294 1 1386 130 0 27 chr2 93957624 93957680 -159298903 - AluSg/x SINE Alu -172 140 84 434 78 0 0 chr2 93957681 93957745 -159298838 - Alu SINE Alu -3 307 244 1415 124 0 10 chr2 93957750 93957959 -159298624 - AluSg/x SINE Alu -24 288 82 1278 137 0 31 chr2 93957960 93958186 -159298397 - AluSg/x SINE Alu -12 298 80 1253 157 0 14 chr2 93958185 93958401 -159298182 - AluSg/x SINE Alu -11 301 89 * 22 0 0 0 chr2 93958405 93958427 -159298156 + AT_rich Low_complexity Low_complexity 1 22 0 676 74 0 62 chr2 93958449 93958625 -159297958 + (GCTG)n Simple_repeat Simple_repeat 2 166 0 587 108 0 65 chr2 93958677 93958958 -159297625 + (GCTG)n Simple_repeat Simple_repeat 1 262 0 445 153 24 12 chr2 93959102 93959187 -159297396 + LTR9B LTR ERV1 118 203 -441 1917 119 61 4 chr2 93959196 93959474 -159297109 - AluSc SINE Alu -7 302 9 313 45 0 23 chr2 93959493 93959537 -159297046 - AluY SINE Alu -256 44 2 * 2478 161 44 5 chr2 93959537 93959967 -159296616 + LTR9B LTR ERV1 198 644 0 1207 228 133 10 chr2 93959976 93960366 -159296217 + MLT1D LTR MaLR 68 505 0 203 286 36 12 chr2 93961639 93961807 -159294776 + (TA)n Simple_repeat Simple_repeat 1 172 0 245 245 0 0 chr2 93962674 93962723 -159293860 + Alu SINE Alu 34 82 -220 695 251 26 17 chr2 93962868 93963099 -159293484 - L1MB3 LINE L1 -1 6182 5950 1931 233 86 23 chr2 93963112 93963554 -159293029 - MER70A LTR ERVL -2 470 1 1865 167 93 6 chr2 93963558 93963912 -159292671 - MER70A-int LTR ERVL -1 5022 4638 3608 151 17 2 chr2 93963930 93964507 -159292076 - MERVL LTR ERVL -2150 2873 2288 305 297 50 40 chr2 93965116 93965484 -159291099 - MERVL LTR ERVL -952 4533 4141 26 64 0 0 chr2 93966230 93966277 -159290306 + AT_rich Low_complexity Low_complexity 1 47 0 226 228 38 76 chr2 93966963 93967042 -159289541 + MLT2E LTR ERVL 56 131 -497 515 196 93 9 chr2 93967307 93967414 -159289169 + MER65C LTR ERV1 1 116 -345 2962 128 47 0 chr2 93967420 93967888 -159288695 + LOR1a LTR ERV1 8 497 0 1348 224 39 6 chr2 93967891 93968222 -159288361 + MER65C LTR ERV1 115 456 -5 26 0 0 0 chr2 93969504 93969530 -159287053 + AT_rich Low_complexity Low_complexity 1 26 0 603 225 130 70 chr2 93970246 93970665 -159285918 - LTR48B LTR ERV1 -4 640 171 1132 216 42 0 chr2 93970821 93971080 -159285503 - Tigger2a DNA MER2_type 0 444 175 305 176 108 14 chr2 93971085 93971159 -159285424 - Tigger2a DNA MER2_type -353 81 1 861 221 45 116 chr2 93971333 93971713 -159284870 + MLT1A1 LTR MaLR 1 353 -12 424 320 87 10 chr2 93971724 93971930 -159284653 + LTR16C LTR ERVL 186 407 -84 4549 157 47 42 chr2 93972149 93973014 -159283569 + MER4D LTR ERV1 3 872 0 261 186 0 68 chr2 93973229 93973288 -159283295 + MLT1D LTR MaLR 3 57 -448 485 0 0 0 chr2 93973291 93973348 -159283235 + LTR9B LTR ERV1 1 57 -587 893 63 0 9 chr2 93973350 93973461 -159283122 - LTR7 LTR ERV1 0 450 341 874 136 8 18 chr2 93973735 93973903 -159282680 - LTR7 LTR ERV1 -232 218 1 3549 111 17 13 chr2 93973903 93974442 -159282141 - HERVH LTR ERV1 0 7713 7173 254 104 62 0 chr2 93974443 93974491 -159282092 - HERVH LTR ERV1 0 7713 7663 * 2456 188 7 7 chr2 93974479 93974943 -159281640 - HERVH LTR ERV1 -761 6952 6489 3367 152 10 4 chr2 93974943 93975305 -159281278 - HERVH LTR ERV1 -2736 4258 4224 217 65 0 43 chr2 93975305 93975351 -159281232 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 3367 152 10 4 chr2 93975351 93975773 -159280810 - HERVH LTR ERV1 -2770 4224 3806 * 4778 142 10 15 chr2 93975767 93976569 -159280014 - HERVH LTR ERV1 -4126 3587 2790 * 6213 146 1 28 chr2 93976552 93977583 -159279000 - HERVH LTR ERV1 -5286 2427 1425 1745 139 0 0 chr2 93977573 93977846 -159278737 + HERVH LTR ERV1 1782 2054 -5659 * 616 130 83 3 chr2 93977983 93978301 -159278282 + (CATTT)n Simple_repeat Simple_repeat 1 343 0 784 126 61 14 chr2 93978332 93978949 -159277634 + (CATTT)n Simple_repeat Simple_repeat 1 646 0 546 120 51 46 chr2 93978969 93979144 -159277439 + (CATTT)n Simple_repeat Simple_repeat 3 178 0 * 565 108 83 13 chr2 93979103 93979260 -159277323 + (CATCT)n Simple_repeat Simple_repeat 2 169 0 716 92 85 0 chr2 93979265 93979429 -159277154 + (CATTT)n Simple_repeat Simple_repeat 1 178 0 220 167 139 0 chr2 93979431 93979503 -159277080 + (CATCT)n Simple_repeat Simple_repeat 3 84 0 * 614 100 90 20 chr2 93979480 93979726 -159276857 + (CATTT)n Simple_repeat Simple_repeat 1 263 0 524 103 85 24 chr2 93979736 93979901 -159276682 + (CATCT)n Simple_repeat Simple_repeat 5 179 0 768 114 40 23 chr2 93979908 93980083 -159276500 + (CATTT)n Simple_repeat Simple_repeat 1 178 0 803 78 72 12 chr2 93980133 93980300 -159276283 + (CATTT)n Simple_repeat Simple_repeat 2 178 0 724 99 72 15 chr2 93980312 93980649 -159275934 + (CATTT)n Simple_repeat Simple_repeat 1 356 0 358 174 39 34 chr2 93980626 93980804 -159275779 + (CATCT)n Simple_repeat Simple_repeat 1 179 0 * 32 64 0 13 chr2 93980903 93980944 -159275639 + AT_rich Low_complexity Low_complexity 1 41 -36 716 189 23 30 chr2 93980944 93980958 -159275625 - FLAM_C SINE Alu -171 131 118 1458 203 50 17 chr2 93980958 93981259 -159275324 - AluJo SINE Alu -1 311 1 306 0 0 0 chr2 93981259 93981293 -159275290 + (TTTA)n Simple_repeat Simple_repeat 1 34 0 716 189 23 30 chr2 93981293 93981409 -159275174 - FLAM_C SINE Alu -182 120 1 32 64 0 13 chr2 93981409 93981445 -159275138 + AT_rich Low_complexity Low_complexity 41 77 0 257 313 47 0 chr2 93981839 93981967 -159274616 + (CTAGGG)n Simple_repeat Simple_repeat 3 136 0 287 127 0 85 chr2 93981969 93982134 -159274449 + (CAGGG)n Simple_repeat Simple_repeat 5 155 0 285 136 0 85 chr2 93982263 93982439 -159274144 + (CAGGG)n Simple_repeat Simple_repeat 1 161 0 337 171 0 59 chr2 93982628 93982798 -159273785 + (CAGGG)n Simple_repeat Simple_repeat 2 161 0 274 143 0 68 chr2 93982931 93983064 -159273519 + (CAGGG)n Simple_repeat Simple_repeat 1 124 0 228 231 6 82 chr2 93983138 93983320 -159273263 + (CAGGG)n Simple_repeat Simple_repeat 4 171 0 * 243 223 0 69 chr2 93983237 93983367 -159273216 + (CAGAG)n Simple_repeat Simple_repeat 1 121 0 * 389 207 0 67 chr2 93983331 93983510 -159273073 + (CAGGG)n Simple_repeat Simple_repeat 1 167 0 205 141 0 90 chr2 93983517 93983595 -159272988 + (CCCTG)n Simple_repeat Simple_repeat 1 71 0 764 134 0 17 chr2 93983649 93983768 -159272815 - AluSq/x SINE Alu -180 133 17 380 202 32 11 chr2 93983770 93983864 -159272719 + MIR SINE MIR 92 187 -75 380 286 54 0 chr2 93984068 93984236 -159272347 + (CCCTAG)n Simple_repeat Simple_repeat 1 177 0 349 231 75 6 chr2 93984449 93984609 -159271974 + (CTAGGG)n Simple_repeat Simple_repeat 2 172 0 208 163 0 54 chr2 93984671 93984763 -159271820 + (CAGGG)n Simple_repeat Simple_repeat 5 91 0 488 257 47 0 chr2 93984768 93984939 -159271644 + (CTAGGG)n Simple_repeat Simple_repeat 2 180 0 289 236 39 60 chr2 93984952 93985134 -159271449 + (CTAGGG)n Simple_repeat Simple_repeat 1 178 0 223 185 39 84 chr2 93985120 93985298 -159271285 + (CAGGC)n Simple_repeat Simple_repeat 3 172 0 * 344 286 54 6 chr2 93985314 93985482 -159271101 + (CTAGGG)n Simple_repeat Simple_repeat 3 178 0 193 159 0 68 chr2 93985491 93985579 -159271004 + (CAGGG)n Simple_repeat Simple_repeat 1 82 0 281 314 29 29 chr2 93985661 93985836 -159270747 + (CTAGGG)n Simple_repeat Simple_repeat 4 178 0 423 215 51 40 chr2 93985879 93986056 -159270527 + (CTAGGG)n Simple_repeat Simple_repeat 1 179 0 423 267 48 9 chr2 93986137 93986480 -159270103 + (CTAGGG)n Simple_repeat Simple_repeat 1 356 0 221 125 0 21 chr2 93986497 93986545 -159270038 + (CAGGG)n Simple_repeat Simple_repeat 1 47 0 374 184 0 72 chr2 93986628 93986780 -159269803 + (CAGGG)n Simple_repeat Simple_repeat 1 141 0 395 263 53 0 chr2 93986819 93986971 -159269612 + (CTAGGG)n Simple_repeat Simple_repeat 1 160 0 274 194 0 92 chr2 93986946 93987142 -159269441 + (CAGGG)n Simple_repeat Simple_repeat 2 179 0 * 190 143 41 0 chr2 93987180 93987229 -159269354 + (CTAGGG)n Simple_repeat Simple_repeat 2 52 0 311 204 6 72 chr2 93987325 93987492 -159269091 + (CAGGG)n Simple_repeat Simple_repeat 1 156 0 * 348 138 16 96 chr2 93987444 93987632 -159268951 + (CAGGC)n Simple_repeat Simple_repeat 3 175 0 * 491 212 11 49 chr2 93987575 93987759 -159268824 + (CAGGG)n Simple_repeat Simple_repeat 1 177 0 847 262 103 33 chr2 93988562 93988915 -159267668 - HSREP522 Satellite telomeric -171 377 1 4947 216 67 14 chr2 93989050 93990345 -159266238 + L1 LINE L1 2785 4148 -1998 2366 137 80 21 chr2 93990345 93990819 -159265764 - HSREP522 Satellite telomeric 0 504 3 1597 191 137 18 chr2 93990840 93991512 -159265071 - TAR1 Satellite telomeric -244 1867 1116 207 129 0 0 chr2 93991939 93991970 -159264613 - SUBTEL_sa Satellite Satellite -129 45 15 232 320 70 12 chr2 93991983 93992155 -159264428 - L1MEc LINE L1 -3385 3155 2974 1367 220 22 0 chr2 93992155 93992423 -159264160 - AluJo SINE Alu -38 274 1 1271 245 56 60 chr2 93992507 93993009 -159263574 - LTR53 LTR ERVL 0 519 20 685 230 83 87 chr2 93993020 93993876 -159262707 - L1MEc LINE L1 -3753 2787 1883 21 100 0 0 chr2 93994068 93994138 -159262445 + AT_rich Low_complexity Low_complexity 1 70 0 2034 79 0 8 chr2 93994211 93994477 -159262106 + L1PA8 LINE L1 5906 6169 -3 21 0 0 0 chr2 93994477 93994498 -159262085 + AT_rich Low_complexity Low_complexity 1 21 0 249 331 8 0 chr2 93995341 93995462 -159261121 - L1 LINE L1 -3135 3011 2890 2028 144 0 3 chr2 93995643 93995941 -159260642 - AluSx SINE Alu -15 297 1 195 47 23 47 chr2 93996167 93996210 -159260373 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 796 234 6 0 chr2 93996808 93996979 -159259604 + L1MB3 LINE L1 5659 5830 -353 873 120 16 0 chr2 93996979 93997104 -159259479 - BC200 scRNA scRNA -60 140 14 1155 216 106 0 chr2 93997108 93997391 -159259192 + L1MB3 LINE L1 5799 6111 -72 186 43 0 0 chr2 93998684 93998707 -159257876 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 1011 254 85 0 chr2 93998754 93999084 -159257499 - MER47A DNA MER2_type 0 366 9 233 268 0 9 chr2 93999246 93999358 -159257225 + (TATG)n Simple_repeat Simple_repeat 4 114 0 1345 267 32 24 chr2 93999967 94000461 -159256122 - L1MC4a LINE L1 -10 7798 7301 2476 68 0 0 chr2 94002143 94002437 -159254146 - AluY SINE Alu -17 294 1 350 355 25 15 chr2 94002571 94002768 -159253815 + MIR SINE MIR 64 262 0 1365 185 3 13 chr2 94005097 94005411 -159251172 - AluY SINE Alu 0 311 1 809 191 0 0 chr2 94005704 94005835 -159250748 + FLAM_A SINE Alu 1 131 -2 712 229 3 13 chr2 94006282 94006477 -159250106 + L1MB8 LINE L1 5977 6179 -5 297 260 36 61 chr2 94006614 94006810 -159249773 + L1M4 LINE L1 3545 3735 -2411 22 35 0 0 chr2 94006816 94006845 -159249738 + AT_rich Low_complexity Low_complexity 1 29 0 1521 188 6 35 chr2 94006989 94007303 -159249280 - L1MB3 LINE L1 -50 6133 5829 827 153 0 0 chr2 94007963 94008087 -159248496 + AluSq/x SINE Alu 1 124 -189 514 183 48 16 chr2 94008205 94008377 -159248206 - L1M4 LINE L1 -2879 3267 3087 1600 188 51 3 chr2 94008377 94008669 -159247914 - AluJo SINE Alu -6 306 1 514 183 48 16 chr2 94008669 94008682 -159247901 - L1M4 LINE L1 -3059 3087 3076 1325 159 5 5 chr2 94008718 94008925 -159247658 - AluJo SINE Alu -33 279 73 1495 206 131 0 chr2 94008925 94009299 -159247284 - L1M4 LINE L1 -3060 3086 2664 711 243 111 34 chr2 94009327 94009562 -159247021 + L1ME LINE L1 25 277 -5793 253 298 11 11 chr2 94010877 94010971 -159245612 + MIR SINE MIR 30 123 -85 1850 137 30 0 chr2 94011072 94011343 -159245240 - AluSx SINE Alu -33 279 1 1501 145 0 18 chr2 94011797 94012025 -159244558 - AluSx SINE Alu -88 224 1 980 236 9 0 chr2 94012027 94012243 -159244340 - MER66-int LTR ERV1 -5492 1184 967 409 252 16 71 chr2 94012368 94012495 -159244088 + MER66-int LTR ERV1 1181 1300 -5376 1998 160 7 0 chr2 94012568 94012874 -159243709 + AluSx SINE Alu 1 308 -4 1126 182 12 86 chr2 94012875 94013220 -159243363 + MER66-int LTR ERV1 2397 2766 -3910 1609 132 0 12 chr2 94013220 94013462 -159243121 - AluSc SINE Alu -21 288 50 1126 182 12 86 chr2 94013462 94013549 -159243034 + MER66-int LTR ERV1 2766 4459 -2217 2129 139 0 3 chr2 94013826 94014128 -159242455 - AluSx SINE Alu -11 301 1 234 302 23 8 chr2 94014443 94014572 -159242011 + L1M4 LINE L1 3253 3383 -2763 1472 204 157 11 chr2 94014582 94014964 -159241619 - MER66A LTR ERV1 -40 438 1 1508 178 40 14 chr2 94014967 94015243 -159241340 - MER66A-int LTR ERV1 -4 6672 6390 1037 211 95 32 chr2 94015232 94015516 -159241067 - MER66-int LTR ERV1 -1735 4941 4640 * 1636 162 0 22 chr2 94015517 94015789 -159240794 - AluSx SINE Alu -10 302 37 378 0 0 0 chr2 94016174 94016216 -159240367 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 313 270 141 52 chr2 94016254 94016602 -159239981 + L1MC5 LINE L1 7557 7935 -26 24 0 0 0 chr2 94016804 94016828 -159239755 + AT_rich Low_complexity Low_complexity 1 24 0 222 230 11 35 chr2 94017541 94017628 -159238955 + A-rich Low_complexity Low_complexity 4 88 0 743 217 65 0 chr2 94017650 94017880 -159238703 + L1ME1 LINE L1 5122 5366 -780 2843 202 51 13 chr2 94017902 94018530 -159238053 + L1ME1 LINE L1 5510 6161 -5 4931 146 5 10 chr2 94018827 94019205 -159237378 - L1PB4 LINE L1 0 6156 5778 216 0 0 0 chr2 94019205 94019229 -159237354 + (CA)n Simple_repeat Simple_repeat 2 25 0 4931 146 5 10 chr2 94019229 94019649 -159236934 - L1PB4 LINE L1 -378 5778 5362 1184 103 12 6 chr2 94019651 94019816 -159236767 - THE1B LTR MaLR 0 364 199 33 43 0 0 chr2 94020369 94020416 -159236167 + AT_rich Low_complexity Low_complexity 1 47 0 610 177 41 114 chr2 94020440 94020660 -159235923 + LTR37B LTR ERV1 96 299 -169 314 211 0 22 chr2 94020672 94020762 -159235821 + (TATG)n Simple_repeat Simple_repeat 3 90 0 1671 191 19 9 chr2 94020798 94021113 -159235470 + Tigger7 DNA MER2_type 1 318 -2169 759 98 136 0 chr2 94021110 94021242 -159235341 + Tigger7 DNA MER2_type 2299 2448 -39 * 285 98 0 0 chr2 94021575 94021616 -159234967 + (GA)n Simple_repeat Simple_repeat 2 42 0 22 35 0 0 chr2 94021642 94021671 -159234912 + AT_rich Low_complexity Low_complexity 1 29 0 2317 91 0 3 chr2 94021996 94022292 -159234291 - AluSg SINE Alu -15 295 1 852 74 57 20 chr2 94022458 94022757 -159233826 + CT-rich Low_complexity Low_complexity 1 310 0 430 199 13 12 chr2 94022769 94022939 -159233644 + CT-rich Low_complexity Low_complexity 1 170 0 1891 194 24 13 chr2 94023329 94023710 -159232873 + L1MDa LINE L1 3 387 -6153 911 211 38 38 chr2 94023713 94023950 -159232633 + L1MDa LINE L1 962 1198 -5342 1278 233 32 6 chr2 94023990 94024329 -159232254 + L1MDa LINE L1 3034 3381 -3159 1106 177 92 53 chr2 94024343 94024525 -159232058 + L1MD2 LINE L1 5644 5842 -517 1733 129 6 69 chr2 94024525 94024842 -159231741 + AluJo SINE Alu 5 301 -11 1106 177 92 53 chr2 94024842 94024941 -159231642 + L1MD2 LINE L1 5842 5936 -423 531 247 62 65 chr2 94024965 94025321 -159231262 - L1ME LINE L1 -534 5628 5274 259 221 180 49 chr2 94025534 94025656 -159230927 + MLT1J LTR MaLR 277 414 -97 3753 105 27 0 chr2 94025792 94026494 -159230089 - L1P4 LINE L1 -365 5803 5087 334 332 66 16 chr2 94027147 94027403 -159229180 + L1MC4a LINE L1 5589 5857 -1951 2964 249 48 13 chr2 94028462 94029577 -159227006 - L1MB8 LINE L1 0 6178 5015 2659 132 7 94 chr2 94029578 94030171 -159226412 + L1P LINE L1 4038 4578 -1568 1232 261 7 3 chr2 94030272 94030567 -159226016 - MER70A LTR ERVL -176 296 1 2014 228 68 26 chr2 94030574 94031361 -159225222 - L1MB3 LINE L1 -261 5922 5099 2020 104 3 20 chr2 94033310 94033609 -159222974 + AluSc SINE Alu 1 294 -15 201 271 12 12 chr2 94034968 94035053 -159221530 + (TA)n Simple_repeat Simple_repeat 2 86 0 30 83 0 0 chr2 94035069 94035141 -159221442 + AT_rich Low_complexity Low_complexity 1 72 0 683 225 2 1 chr2 94035919 94036090 -159220493 - L1 LINE L1 -1098 5048 4877 634 313 24 14 chr2 94036445 94036656 -159219927 + MIR SINE MIR 50 262 0 312 262 10 68 chr2 94036729 94036832 -159219751 + L2 LINE L2 2672 2768 -546 464 260 45 45 chr2 94036864 94037018 -159219565 - MER5B DNA MER1_type -2 176 23 757 138 25 25 chr2 94037438 94037598 -159218985 - MER96B DNA MER1_type? -3 414 255 2150 123 3 22 chr2 94037654 94037972 -159218611 - AluSx SINE Alu 0 312 1 450 157 0 0 chr2 94038176 94038246 -159218337 + AluJb SINE Alu 165 234 -78 267 106 21 0 chr2 94038351 94038398 -159218185 - Alu SINE Alu -28 272 225 1219 228 163 34 chr2 94039072 94039580 -159217003 + L2 LINE L2 1998 2571 -743 267 258 20 93 chr2 94040101 94040195 -159216388 - LTR67 LTR ERVL 0 557 477 3124 119 59 41 chr2 94040195 94040784 -159215799 + MER4A LTR ERV1 1 600 0 267 258 20 93 chr2 94040784 94040840 -159215743 - LTR67 LTR ERVL -80 477 418 24 0 0 0 chr2 94041112 94041136 -159215447 + AT_rich Low_complexity Low_complexity 1 24 0 482 250 89 67 chr2 94041372 94041552 -159215031 + MIR3 SINE MIR 2 185 -23 404 211 105 20 chr2 94041762 94041914 -159214669 - MLT1I LTR MaLR -13 396 232 1080 79 7 0 chr2 94044943 94045095 -159211488 - L1MA2 LINE L1 -16 6288 6136 897 186 44 3 chr2 94045212 94045498 -159211085 + Tigger2a DNA MER2_type 1 385 -59 25 0 0 0 chr2 94045692 94045717 -159210866 + AT_rich Low_complexity Low_complexity 1 25 0 1612 211 52 25 chr2 94047033 94047369 -159209214 - MER65C LTR ERV1 -4 457 105 2649 134 42 44 chr2 94047369 94047867 -159208716 - LOR1a LTR ERV1 0 497 1 1612 211 52 25 chr2 94047867 94047975 -159208608 - MER65C LTR ERV1 -356 105 1 21 71 0 0 chr2 94049006 94049048 -159207535 + AT_rich Low_complexity Low_complexity 1 42 0 33 90 0 0 chr2 94049143 94049232 -159207351 + AT_rich Low_complexity Low_complexity 1 89 0 2313 216 49 24 chr2 94051937 94052719 -159203864 + L1MB3 LINE L1 5120 5921 -262 1777 216 114 5 chr2 94052727 94053149 -159203434 + MER70A LTR ERVL 1 468 -4 866 188 29 0 chr2 94053153 94053323 -159203260 + MER70A-int LTR ERVL 1 175 -4848 4124 222 69 16 chr2 94053369 94054465 -159202118 + MER66-int LTR ERV1 30 1184 -5492 295 70 23 0 chr2 94054467 94054510 -159202073 + AluY SINE Alu 1 44 -255 2252 205 44 45 chr2 94054611 94055421 -159201162 + L1MB3 LINE L1 5107 5921 -262 582 254 8 0 chr2 94055429 94055559 -159201024 + MER70A LTR ERVL 1 131 -341 432 239 30 30 chr2 94056737 94056871 -159199712 - MER3 DNA MER1_type -56 153 20 396 256 74 17 chr2 94057658 94057845 -159198738 + MLT1B LTR MaLR 1 185 -189 226 354 10 0 chr2 94057923 94058019 -159198564 + MLT1B LTR MaLR 180 276 -89 818 200 89 30 chr2 94061041 94061436 -159195147 - MLT1D LTR MaLR 0 505 135 3681 148 22 22 chr2 94061436 94061868 -159194715 - LTR9B LTR ERV1 0 644 213 2289 107 0 3 chr2 94061868 94062176 -159194407 + AluSc SINE Alu 1 307 -2 3681 148 22 22 chr2 94062176 94062242 -159194341 - LTR9B LTR ERV1 -431 213 148 2106 59 30 4 chr2 94062242 94062513 -159194070 + AluY SINE Alu 20 297 -14 3681 148 22 22 chr2 94062513 94062657 -159193926 - LTR9B LTR ERV1 -495 149 1 818 200 89 30 chr2 94062657 94062708 -159193875 - MLT1D LTR MaLR -370 135 12 2700 124 31 56 chr2 94062933 94063455 -159193128 - MER4D LTR ERV1 0 872 364 23 0 0 0 chr2 94064259 94064282 -159192301 + AT_rich Low_complexity Low_complexity 1 23 0 4092 98 40 3 chr2 94066166 94066748 -159189835 + LTR14B LTR ERVK 4 606 -2 22 0 0 0 chr2 94067004 94067026 -159189557 + AT_rich Low_complexity Low_complexity 1 22 0 215 190 63 0 chr2 94067026 94067105 -159189478 + (CATATA)n Simple_repeat Simple_repeat 5 88 0 189 132 0 0 chr2 94067107 94067145 -159189438 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 24 91 0 0 chr2 94067388 94067454 -159189129 + AT_rich Low_complexity Low_complexity 1 66 0 22 0 0 0 chr2 94068061 94068083 -159188500 + AT_rich Low_complexity Low_complexity 1 22 0 1671 209 49 22 chr2 94068460 94068568 -159188015 + MER65C LTR ERV1 1 105 -356 2980 115 35 12 chr2 94068568 94069054 -159187529 + LOR1a LTR ERV1 1 497 0 1671 209 49 22 chr2 94069054 94069390 -159187193 + MER65C LTR ERV1 105 457 -4 235 314 20 0 chr2 94070550 94070652 -159185931 + L1MC4 LINE L1 7788 7891 -151 22 0 0 0 chr2 94070718 94070740 -159185843 + AT_rich Low_complexity Low_complexity 1 22 0 442 256 104 50 chr2 94071458 94071973 -159184610 - LTR48B LTR ERV1 -5 782 1 1155 183 34 4 chr2 94072030 94072292 -159184291 - Tigger2a DNA MER2_type 0 444 175 286 171 171 0 chr2 94072293 94072369 -159184214 - Tigger2a DNA MER2_type -345 89 1 594 212 52 128 chr2 94072544 94072926 -159183657 + MLT1A1 LTR MaLR 1 353 -12 1441 175 84 0 chr2 94073349 94073646 -159182937 + MER4D LTR ERV1 1 322 -550 2353 88 3 7 chr2 94073646 94073952 -159182631 - AluY SINE Alu 0 311 7 1399 226 54 20 chr2 94074123 94074230 -159182353 + MER65C LTR ERV1 1 103 -358 2914 141 29 0 chr2 94074230 94074713 -159181870 + LOR1a LTR ERV1 1 497 0 1399 226 54 20 chr2 94074713 94075047 -159181536 + MER65C LTR ERV1 103 457 -4 255 257 30 10 chr2 94076204 94076305 -159180278 + L1MC4 LINE L1 7789 7891 -151 3564 135 16 7 chr2 94076762 94077369 -159179214 - L1PA15 LINE L1 -277 5888 5276 252 0 0 0 chr2 94077472 94077500 -159179083 + (TG)n Simple_repeat Simple_repeat 1 28 0 322 320 27 7 chr2 94078722 94078872 -159177711 + L1 LINE L1 3595 3747 -2399 25 0 0 0 chr2 94079050 94079075 -159177508 + AT_rich Low_complexity Low_complexity 1 25 0 241 346 71 16 chr2 94079155 94079282 -159177301 - MIR SINE MIR -93 169 36 1645 282 44 10 chr2 94079391 94079984 -159176599 - L1ME1 LINE L1 -46 6120 5508 397 286 0 23 chr2 94080656 94080789 -159175794 + FLAM_C SINE Alu 1 130 -3 1034 186 16 20 chr2 94080912 94081159 -159175424 - L1MB3 LINE L1 -1 6182 5937 1840 237 24 24 chr2 94081159 94081627 -159174956 - MER70A LTR ERVL -2 470 3 14416 200 27 7 chr2 94081633 94084418 -159172165 - MER70A-int LTR ERVL 0 5023 2182 405 0 0 0 chr2 94086514 94086559 -159170024 + (TTTTA)n Simple_repeat Simple_repeat 5 49 0 671 302 45 22 chr2 94086790 94087285 -159169298 - L1MEc LINE L1 -4488 2223 1755 1098 184 0 5 chr2 94087316 94087522 -159169061 - L1PA16 LINE L1 0 6166 5962 1249 138 13 22 chr2 94087522 94087742 -159168841 + L1PA16 LINE L1 5754 5971 -195 508 312 47 8 chr2 94087746 94088105 -159168478 - L1MEc LINE L1 -4976 1566 1194 376 284 83 52 chr2 94089469 94089743 -159166840 - L1ME3 LINE L1 -29 6133 5851 245 260 52 0 chr2 94090198 94090275 -159166308 + L1MC1 LINE L1 5730 5810 -1998 330 219 62 0 chr2 94090278 94090374 -159166209 + (CCTG)n Simple_repeat Simple_repeat 2 103 0 6888 80 14 68 chr2 94090376 94091478 -159165105 + SVA Other Other 3 1044 -342 2525 192 170 21 chr2 94091780 94092452 -159164131 + L1MCa LINE L1 476 1247 -5179 1387 72 5 10 chr2 94092459 94092652 -159163931 - MER75B DNA T2_type 0 243 52 358 215 15 0 chr2 94093238 94093303 -159163280 - MER75B DNA T2_type -177 66 1 4444 241 66 36 chr2 94093354 94096107 -159160476 + L1MCa LINE L1 1307 4140 -2286 2448 174 68 32 chr2 94096140 94096670 -159159913 + L1MC1 LINE L1 5785 6333 0 5143 67 13 10 chr2 94096681 94097356 -159159227 + SVA Other Other 710 1386 0 27 49 0 0 chr2 94097458 94097499 -159159084 + AT_rich Low_complexity Low_complexity 1 41 0 315 153 61 0 chr2 94097994 94098092 -159158491 + (TA)n Simple_repeat Simple_repeat 2 105 0 333 0 0 0 chr2 94098092 94098129 -159158454 + (TC)n Simple_repeat Simple_repeat 2 38 0 297 0 0 0 chr2 94098128 94098161 -159158422 + (TA)n Simple_repeat Simple_repeat 1 33 0 * 1505 227 63 44 chr2 94098250 94098775 -159157808 - LTR55 LTR ERV -13 535 1 583 145 17 8 chr2 94098909 94099026 -159157557 + L1MA10 LINE L1 6216 6333 -1 21 36 0 0 chr2 94099836 94099864 -159156719 + AT_rich Low_complexity Low_complexity 1 28 0 216 67 0 0 chr2 94100416 94100446 -159156137 + (TAAAA)n Simple_repeat Simple_repeat 4 33 0 509 333 0 6 chr2 94103585 94103756 -159152827 + ERVL LTR ERVL 3005 3174 -2590 403 222 95 0 chr2 94103756 94103882 -159152701 + L1M4 LINE L1 2592 2729 -3417 1851 188 16 0 chr2 94103882 94104191 -159152392 - MER41D LTR ERV1 0 557 244 6528 87 10 0 chr2 94104758 94106034 -159150549 + L1PA12 LINE L1 4883 6167 -1 492 274 18 6 chr2 94106120 94106284 -159150299 - L1M4 LINE L1 -1239 4907 4742 2264 185 24 16 chr2 94106308 94106734 -159149849 + Tigger2a DNA MER2_type 6 434 0 1257 221 63 8 chr2 94106738 94107105 -159149478 - L1M4 LINE L1 -1408 4738 4352 1857 221 79 10 chr2 94107118 94107534 -159149049 - MER82 DNA MER2_type -1 652 208 264 59 0 0 chr2 94107534 94107568 -159149015 + (TG)n Simple_repeat Simple_repeat 2 35 0 14338 134 33 9 chr2 94107576 94109267 -159147316 + Tigger1 DNA MER2_type 6 1770 -648 439 155 0 0 chr2 94109267 94109338 -159147245 + L1PA8A LINE L1 6061 6131 0 14338 134 33 9 chr2 94109338 94110002 -159146581 + Tigger1 DNA MER2_type 1770 2417 -1 581 209 52 0 chr2 94110053 94110187 -159146396 - MER82 DNA MER2_type -480 173 33 2998 261 68 25 chr2 94110216 94111443 -159145140 - L1M4 LINE L1 -1806 4340 3061 27 0 0 0 chr2 94111499 94111526 -159145057 + AT_rich Low_complexity Low_complexity 1 27 0 1685 241 85 42 chr2 94111761 94112375 -159144208 + MLT1E1 LTR MaLR 13 652 -2 2050 127 0 0 chr2 94112701 94112985 -159143598 + AluSg SINE Alu 22 305 -5 195 129 0 0 chr2 94113396 94113427 -159143156 + (CA)n Simple_repeat Simple_repeat 2 32 0 479 253 13 6 chr2 94114975 94115132 -159141451 + L1M2a LINE L1 1858 2031 -5060 21 0 0 0 chr2 94115338 94115359 -159141224 + AT_rich Low_complexity Low_complexity 1 21 0 186 43 0 0 chr2 94116422 94116445 -159140138 + (A)n Simple_repeat Simple_repeat 1 23 0 303 274 11 21 chr2 94117139 94117234 -159139349 + L1M4 LINE L1 5106 5199 -947 6849 157 17 6 chr2 94117355 94119409 -159137174 - L1MA2 LINE L1 -275 6029 3949 4774 44 3 21 chr2 94119799 94120414 -159136169 - L1PA7 LINE L1 -4 6150 5547 2296 82 0 6 chr2 94120414 94120729 -159135854 + L1P LINE L1 4779 5091 -1055 195 42 0 0 chr2 94120857 94120881 -159135702 + (TAA)n Simple_repeat Simple_repeat 2 25 0 2057 137 0 0 chr2 94120889 94121174 -159135409 - AluSx SINE Alu -27 285 1 406 253 22 0 chr2 94121435 94121526 -159135057 + FLAM_A SINE Alu 40 132 -1 24 0 0 0 chr2 94121738 94121762 -159134821 + AT_rich Low_complexity Low_complexity 1 24 0 617 201 8 45 chr2 94122239 94122373 -159134210 + MER44D DNA MER2_type 4 402 -207 2010 195 3 0 chr2 94123171 94123514 -159133069 + ERVL LTR ERVL 4130 4473 -1291 1304 137 9 9 chr2 94123514 94123741 -159132842 - Cheshire DNA MER1_type -1560 860 634 381 153 0 35 chr2 94123745 94123830 -159132753 - L1M4 LINE L1 -2196 3950 3869 * 2797 260 26 19 chr2 94123809 94124708 -159131875 - L1MCa LINE L1 -1953 4473 3569 1083 190 55 52 chr2 94124681 94125174 -159131409 - L1MCa LINE L1 -3883 2724 2178 * 23 0 0 0 chr2 94125393 94125416 -159131167 + AT_rich Low_complexity Low_complexity 1 23 0 1975 145 56 37 chr2 94125430 94125838 -159130745 - L1MA4 LINE L1 -7 6293 5878 232 233 17 0 chr2 94125839 94125899 -159130684 - L1MCa LINE L1 -4244 2182 2122 1943 189 3 13 chr2 94125983 94126363 -159130220 + MER45R DNA AcHobo 472 847 -734 361 224 40 0 chr2 94126427 94126503 -159130080 + MER45 DNA AcHobo 1503 1581 0 23 0 0 0 chr2 94126639 94126662 -159129921 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 94126874 94126897 -159129686 + AT_rich Low_complexity Low_complexity 1 23 0 296 119 17 0 chr2 94130174 94130233 -159126350 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 294 29 0 0 chr2 94130260 94130295 -159126288 + (TG)n Simple_repeat Simple_repeat 2 36 0 635 279 62 52 chr2 94130382 94130690 -159125893 - L1ME LINE L1 -541 5629 5319 200 143 29 0 chr2 94130769 94130804 -159125779 + (TCTA)n Simple_repeat Simple_repeat 3 38 0 1309 211 46 60 chr2 94130806 94131157 -159125426 + MLT1A1 LTR MaLR 9 354 -11 460 158 105 0 chr2 94131258 94131391 -159125192 - L1 LINE L1 -1757 4389 4243 1737 103 89 30 chr2 94131399 94131670 -159124913 - L1PA10 LINE L1 -5 6163 5877 826 203 11 33 chr2 94131771 94131953 -159124630 - LTR48B-int LTR ERV1 -1862 4814 4637 1603 157 8 19 chr2 94131953 94132244 -159124339 - AluSx SINE Alu 0 315 28 393 239 36 18 chr2 94132244 94132391 -159124192 - LTR48B-int LTR ERV1 -3010 3588 2421 2053 141 0 43 chr2 94132426 94132752 -159123831 - AluSx SINE Alu 0 312 1 3697 223 55 17 chr2 94132760 94133844 -159122739 - LTR48B-int LTR ERV1 -5498 1178 30 977 182 29 0 chr2 94133890 94134060 -159122523 - MER70A-int LTR ERVL -4848 175 1 1712 249 110 0 chr2 94134065 94134483 -159122100 - MER70A LTR ERVL -8 464 1 2408 219 56 25 chr2 94134491 94135284 -159121299 - L1MB3 LINE L1 -262 5921 5099 248 258 40 13 chr2 94138532 94138683 -159117900 + (TA)n Simple_repeat Simple_repeat 1 155 0 243 202 9 138 chr2 94138885 94138994 -159117589 - MLT1H LTR MaLR -35 514 420 1528 204 52 63 chr2 94139763 94139870 -159116713 + MER65C LTR ERV1 3 110 -351 3052 147 38 0 chr2 94139870 94140347 -159116236 + LOR1a LTR ERV1 1 495 -2 1528 204 52 63 chr2 94140347 94140699 -159115884 + MER65C LTR ERV1 110 457 -4 26 0 0 0 chr2 94142003 94142029 -159114554 + AT_rich Low_complexity Low_complexity 1 26 0 642 239 130 68 chr2 94142733 94143139 -159113444 - LTR48B LTR ERV1 -5 782 184 1419 221 108 38 chr2 94143313 94143377 -159113206 + MLT1D LTR MaLR 3 61 -444 4223 144 16 9 chr2 94143377 94144015 -159112568 + LTR9B LTR ERV1 3 644 0 1419 221 108 38 chr2 94144015 94144420 -159112163 + MLT1D LTR MaLR 61 505 0 225 230 0 27 chr2 94145812 94145886 -159110697 + (TA)n Simple_repeat Simple_repeat 1 72 0 479 225 0 0 chr2 94146748 94146837 -159109746 + FLAM_C SINE Alu 34 122 -21 279 0 0 0 chr2 94146837 94146868 -159109715 + (CA)n Simple_repeat Simple_repeat 2 32 0 652 265 26 13 chr2 94146986 94147216 -159109367 - L1MB3 LINE L1 -1 6182 5950 2349 213 19 27 chr2 94147229 94147703 -159108880 - MER70A LTR ERVL -2 470 1 1777 170 88 42 chr2 94147707 94147896 -159108687 - MER70A-int LTR ERVL -1 5022 4843 3952 186 50 63 chr2 94147896 94148863 -159107720 - LTR13 LTR ERVK 0 954 1 1777 170 88 42 chr2 94148863 94149050 -159107533 - MER70A-int LTR ERVL -180 4843 4629 * 4884 197 70 13 chr2 94149045 94150189 -159106394 - MER70A-int LTR ERVL -2150 2873 1621 5537 204 51 9 chr2 94150189 94151332 -159105251 - MER70A-int LTR ERVL -3832 1191 1 620 216 24 0 chr2 94151336 94151461 -159105122 - MER70A LTR ERVL -4 468 341 1987 136 24 0 chr2 94151606 94151900 -159104683 - AluSx SINE Alu -11 301 1 1418 141 0 43 chr2 94152354 94152588 -159103995 - AluSx SINE Alu -88 224 1 3703 222 51 25 chr2 94152590 94153692 -159102891 - MER66B-int LTR ERV1 -5492 1184 35 1267 204 75 100 chr2 94153780 94154231 -159102352 - MER66B LTR ERV1 -46 440 1 268 256 51 9 chr2 94154317 94154487 -159102096 + L1 LINE L1 3583 3764 -2382 1547 296 46 11 chr2 94155016 94155564 -159101019 - L1ME1 LINE L1 -81 6085 5519 529 224 0 48 chr2 94156233 94156358 -159100225 + FLAM_C SINE Alu 2 120 -23 279 0 0 0 chr2 94156358 94156389 -159100194 + (CA)n Simple_repeat Simple_repeat 2 32 0 536 266 39 22 chr2 94156497 94156726 -159099857 - L1MB3 LINE L1 -1 6182 5950 2141 238 21 21 chr2 94156739 94157209 -159099374 - MER70A LTR ERVL -2 470 1 1110 170 26 21 chr2 94157217 94157570 -159099013 - MER70A-int LTR ERVL -14 5009 4629 * 5226 172 15 1 chr2 94157565 94158455 -159098128 - HERVL LTR ERVL -2150 2873 1972 288 314 41 29 chr2 94158453 94158625 -159097958 - HERVL LTR ERVL -1340 4314 4141 * 26 98 0 0 chr2 94159455 94159537 -159097046 + AT_rich Low_complexity Low_complexity 1 82 0 460 220 73 9 chr2 94160517 94160625 -159095958 + MER65C LTR ERV1 1 115 -346 3095 131 31 0 chr2 94160625 94160740 -159095843 + LOR1a LTR ERV1 1 111 -386 279 0 0 0 chr2 94160740 94160771 -159095812 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3095 131 31 0 chr2 94160771 94161137 -159095446 + LOR1a LTR ERV1 111 497 0 1392 223 42 6 chr2 94161137 94161470 -159095113 + MER65C LTR ERV1 112 456 -5 27 0 0 0 chr2 94162795 94162822 -159093761 + AT_rich Low_complexity Low_complexity 1 27 0 629 256 113 52 chr2 94163538 94163971 -159092612 - LTR48B LTR ERV1 -4 640 156 348 243 14 0 chr2 94164110 94164184 -159092399 - Tigger2a DNA MER2_type 0 444 370 506 215 23 31 chr2 94164223 94164353 -159092230 + MLT1A1 LTR MaLR 235 363 -2 375 301 97 19 chr2 94164353 94164559 -159092024 + LTR16C LTR ERVL 186 407 -84 4784 158 55 18 chr2 94164780 94165618 -159090965 + MER4D LTR ERV1 4 872 0 273 161 0 54 chr2 94165835 94165891 -159090692 + MLT1D LTR MaLR 4 56 -449 1475 107 47 13 chr2 94165895 94166128 -159090455 + LTR9B LTR ERV1 1 241 -403 1514 219 93 19 chr2 94166326 94166434 -159090149 + MER65C LTR ERV1 1 100 -361 3263 125 35 0 chr2 94166434 94166914 -159089669 + LOR1a LTR ERV1 1 497 0 1514 219 93 19 chr2 94166914 94167234 -159089349 + MER65C LTR ERV1 100 461 0 287 304 20 0 chr2 94168391 94168493 -159088090 + L1MC4 LINE L1 7788 7891 -151 664 209 128 66 chr2 94168967 94169240 -159087343 - LTR48B LTR ERV1 -4 640 406 1206 195 38 4 chr2 94169540 94169801 -159086782 - Tigger2a DNA MER2_type 0 444 175 301 214 86 0 chr2 94169812 94169882 -159086701 - Tigger2a DNA MER2_type -358 76 1 342 306 87 38 chr2 94170000 94170056 -159086527 + LTR16C LTR ERVL 134 186 -305 678 308 59 49 chr2 94170056 94170446 -159086137 + MSTD LTR MaLR 1 394 -2 342 306 87 38 chr2 94170446 94170572 -159086011 + LTR16C LTR ERVL 186 325 -166 4886 158 53 20 chr2 94170875 94171716 -159084867 + MER4D LTR ERV1 4 872 0 31818 180 14 16 chr2 94171722 94172557 -159084026 + HERVH LTR ERV1 1793 2628 -5085 3760 72 45 2 chr2 94172557 94173027 -159083556 + LTR2B LTR ERV1 1 490 0 31818 180 14 16 chr2 94173027 94178122 -159078461 + HERVH LTR ERV1 2628 7713 0 2331 160 40 27 chr2 94178122 94178566 -159078017 + LTR7 LTR ERV1 1 450 0 406 192 192 0 chr2 94178571 94178691 -159077892 + MLT1D LTR MaLR 363 505 0 579 269 2 1 chr2 94178785 94178963 -159077620 + L1MDa LINE L1 1585 1829 -4553 1411 248 89 19 chr2 94179035 94180106 -159076477 + L1MDa LINE L1 1967 3108 -3274 454 261 10 15 chr2 94180104 94180299 -159076284 - L1MEc LINE L1 -2923 3721 3528 * 253 308 124 65 chr2 94180964 94181422 -159075161 + L2 LINE L2 2829 3313 0 863 233 87 60 chr2 94181834 94182169 -159074414 + MER2 DNA MER2_type 1 344 0 1112 280 51 52 chr2 94183576 94184129 -159072454 - MLT1E LTR MaLR -6 587 36 7247 68 3 9 chr2 94184628 94186376 -159070207 - L1PA6 LINE L1 -5 6149 4396 247 339 27 27 chr2 94186399 94186511 -159070072 - MIR SINE MIR -115 147 36 1283 290 52 17 chr2 94186639 94187219 -159069364 - L1ME1 LINE L1 -59 6107 5508 455 273 0 23 chr2 94187881 94188009 -159068574 + FLAM_C SINE Alu 3 127 -16 1025 194 12 20 chr2 94188135 94188382 -159068201 - L1MB3 LINE L1 -1 6182 5938 1767 239 24 26 chr2 94188382 94188847 -159067736 - MER70A LTR ERVL -1 471 8 13477 194 28 15 chr2 94188859 94191664 -159064919 - MER70A-int LTR ERVL 0 5023 2182 270 0 0 0 chr2 94193834 94193864 -159062719 + (TTTTA)n Simple_repeat Simple_repeat 5 34 0 420 278 103 53 chr2 94193865 94194128 -159062455 - L1ME3 LINE L1 -9 6153 5878 607 306 45 15 chr2 94194138 94194605 -159061978 - L1MEc LINE L1 -4602 2223 1743 1093 184 0 5 chr2 94194625 94194831 -159061752 - L1PA16 LINE L1 0 6166 5962 1209 120 14 23 chr2 94194835 94195051 -159061532 + L1PA16 LINE L1 5758 5971 -195 488 318 36 6 chr2 94195055 94195417 -159061166 - L1MEc LINE L1 -4976 1566 1194 348 264 83 56 chr2 94196784 94197000 -159059583 - L1ME3 LINE L1 -29 6133 5912 569 269 57 32 chr2 94197036 94197315 -159059268 - L1M4c LINE L1 -4598 2227 1942 434 272 73 32 chr2 94197549 94197920 -159058663 - L1M4c LINE L1 -4923 1619 1234 1307 203 33 23 chr2 94198158 94198459 -159058124 - AluJb SINE Alu -8 304 1 1440 194 3 3 chr2 94198524 94198818 -159057765 + MER47A DNA MER2_type 3 296 -70 450 314 36 10 chr2 94201000 94201194 -159055389 + MIR SINE MIR 64 262 0 997 103 72 0 chr2 94202497 94202691 -159053892 + AluY SINE Alu 76 283 -28 9062 194 24 9 chr2 94202899 94204736 -159051847 + MER70A-int LTR ERVL 3160 5023 0 1806 241 24 24 chr2 94204742 94205210 -159051373 + MER70A LTR ERVL 3 470 -2 1050 182 16 20 chr2 94205210 94205457 -159051126 + L1MB3 LINE L1 5937 6182 -1 470 256 0 23 chr2 94205580 94205713 -159050870 - FLAM_C SINE Alu -3 130 1 1522 270 51 15 chr2 94206385 94206977 -159049606 + L1ME1 LINE L1 5508 6120 -46 254 339 71 16 chr2 94207089 94207216 -159049367 + MIR SINE MIR 36 169 -93 25 0 0 0 chr2 94207296 94207321 -159049262 + AT_rich Low_complexity Low_complexity 1 25 0 253 333 27 7 chr2 94207499 94207649 -159048934 - L1 LINE L1 -2399 4141 3989 237 33 0 0 chr2 94208849 94208879 -159047704 + (TA)n Simple_repeat Simple_repeat 2 31 0 303 28 0 0 chr2 94208880 94208916 -159047667 + (CA)n Simple_repeat Simple_repeat 1 36 0 3586 133 16 7 chr2 94209017 94209624 -159046959 + L1PA15 LINE L1 5276 5888 -277 258 262 139 32 chr2 94210078 94210265 -159046318 - L1MC4 LINE L1 -151 7891 7685 317 161 37 49 chr2 94211233 94211314 -159045269 - LTR33A LTR ERVL 0 523 444 21 0 0 0 chr2 94212280 94212301 -159044282 + AT_rich Low_complexity Low_complexity 1 21 0 227 229 38 67 chr2 94212619 94212724 -159043859 + MLT1H LTR MaLR 420 521 -28 1307 197 3 35 chr2 94213132 94213370 -159043213 + LTR58 LTR ERV1 1 230 -449 1944 169 0 0 chr2 94213370 94213672 -159042911 - AluSx SINE Alu -10 302 1 1307 197 3 35 chr2 94213672 94213723 -159042860 + LTR58 LTR ERV1 230 281 -398 1969 198 24 33 chr2 94213723 94214153 -159042430 + LTR58 LTR ERV1 229 656 -23 1943 152 7 0 chr2 94214153 94214503 -159042080 + AluSq SINE Alu 1 313 0 1969 198 24 33 chr2 94214503 94214526 -159042057 + LTR58 LTR ERV1 656 678 -1 491 351 48 13 chr2 94215098 94215326 -159041257 + MIR SINE MIR 27 262 0 7030 128 11 0 chr2 94217180 94218347 -159038236 + L1P LINE L1 1862 3041 -3105 3259 68 0 9 chr2 94218349 94218775 -159037808 + L1PA8 LINE L1 5751 6172 0 1176 272 44 56 chr2 94219636 94220176 -159036407 + MLT1E LTR MaLR 60 593 0 228 260 31 31 chr2 94221527 94221556 -159035027 + MLT1H LTR MaLR 454 482 -67 788 261 90 22 chr2 94221556 94221878 -159034705 - MER2 DNA MER2_type 0 344 1 228 260 31 31 chr2 94221878 94221944 -159034639 + MLT1H LTR MaLR 481 549 0 180 0 0 0 chr2 94222305 94222325 -159034258 + (TTCA)n Simple_repeat Simple_repeat 1 20 0 1676 248 88 29 chr2 94223625 94224954 -159031629 - L1MDa LINE L1 -3267 3273 1865 1152 235 112 26 chr2 94225061 94225461 -159031122 - MLT1D LTR MaLR 0 505 58 3842 140 29 6 chr2 94225461 94226091 -159030492 - LTR9B LTR ERV1 0 644 1 1152 235 112 26 chr2 94226091 94226153 -159030430 - MLT1D LTR MaLR -447 58 3 4533 161 40 19 chr2 94226368 94227219 -159029364 - MER4D LTR ERV1 0 872 4 400 306 87 10 chr2 94227437 94227643 -159028940 - LTR16C LTR ERVL -84 407 186 647 285 61 66 chr2 94227643 94228039 -159028544 - MSTD LTR MaLR -2 394 1 1215 206 48 6 chr2 94228214 94228555 -159028028 + Tigger2a DNA MER2_type 1 444 0 322 267 99 59 chr2 94228613 94228902 -159027681 + LTR48 LTR ERV1 1 374 -411 681 206 58 42 chr2 94228932 94229121 -159027462 + LTR48B LTR ERV1 449 640 -4 28 0 0 0 chr2 94229834 94229862 -159026721 + AT_rich Low_complexity Low_complexity 1 28 0 311 294 20 0 chr2 94229929 94230031 -159026552 - L1MC4 LINE L1 -151 7891 7788 1665 221 52 20 chr2 94231188 94231522 -159025061 - MER65C LTR ERV1 -4 457 104 3009 153 29 2 chr2 94231522 94232006 -159024577 - LOR1a LTR ERV1 0 497 1 1665 221 52 20 chr2 94232006 94232114 -159024469 - MER65C LTR ERV1 -357 104 1 30 83 0 0 chr2 94233112 94233184 -159023399 + AT_rich Low_complexity Low_complexity 1 72 0 2043 107 3 17 chr2 94234642 94234940 -159021643 - AluSc SINE Alu -15 294 1 1381 226 108 38 chr2 94238306 94238711 -159017872 - MLT1D LTR MaLR 0 505 61 4099 147 17 11 chr2 94238711 94239349 -159017234 - LTR9B LTR ERV1 0 644 3 1381 226 108 38 chr2 94239349 94239413 -159017170 - MLT1D LTR MaLR -444 61 3 617 216 134 59 chr2 94239733 94239987 -159016596 + LTR48B LTR ERV1 406 640 -4 26 0 0 0 chr2 94240691 94240717 -159015866 + AT_rich Low_complexity Low_complexity 1 26 0 1685 211 54 31 chr2 94242042 94242379 -159014204 - MER65C LTR ERV1 -4 457 106 3030 144 38 4 chr2 94242379 94242858 -159013725 - LOR1a LTR ERV1 -2 495 1 1685 211 54 31 chr2 94242858 94242965 -159013618 - MER65C LTR ERV1 -355 106 3 25 0 0 0 chr2 94243345 94243370 -159013213 + AT_rich Low_complexity Low_complexity 1 25 0 235 231 0 130 chr2 94243736 94243844 -159012739 + MLT1H LTR MaLR 420 513 -36 213 258 21 11 chr2 94244108 94244201 -159012382 + (TA)n Simple_repeat Simple_repeat 1 94 0 2381 221 55 27 chr2 94247436 94248232 -159008351 + L1MB3 LINE L1 5099 5921 -262 1821 233 114 0 chr2 94248240 94248660 -159007923 + MER70A LTR ERVL 1 468 -4 981 182 29 0 chr2 94248664 94248834 -159007749 + MER70A-int LTR ERVL 1 175 -4848 3649 225 55 17 chr2 94248880 94249964 -159006619 + LTR48B-int LTR ERV1 30 1178 -5498 2135 148 0 0 chr2 94249972 94250283 -159006300 + AluSx SINE Alu 1 311 -1 386 241 36 18 chr2 94250299 94250446 -159006137 + MER66A-int LTR ERV1 2421 3588 -3010 960 192 12 0 chr2 94250446 94250613 -159005970 + AluSx SINE Alu 28 196 -116 889 149 0 34 chr2 94250612 94250792 -159005791 + AluSg/x SINE Alu 148 322 0 * 1004 234 61 27 chr2 94250792 94251087 -159005496 + MER66A-int LTR ERV1 4637 4941 -1735 * 1581 161 39 14 chr2 94251076 94251356 -159005227 + MER66A-int LTR ERV1 6390 6676 0 1483 208 154 13 chr2 94251356 94251740 -159004843 + MER66A LTR ERV1 1 438 -40 307 295 18 0 chr2 94251750 94251862 -159004721 - L1M4 LINE L1 -2763 3383 3270 1821 108 42 4 chr2 94251863 94252123 -159004460 - AluY SINE Alu -4 307 38 2012 151 0 0 chr2 94252455 94252747 -159003836 + AluSx SINE Alu 1 292 -20 432 320 30 20 chr2 94254033 94254230 -159002353 - MIR SINE MIR 0 262 64 2451 74 0 0 chr2 94254364 94254663 -159001920 + AluY SINE Alu 1 299 -12 1423 269 30 24 chr2 94256337 94256832 -158999751 + L1MC4a LINE L1 7301 7798 -10 376 314 33 45 chr2 94256893 94256930 -158999653 - L1MC4a LINE L1 -1252 6556 6520 2355 89 0 19 chr2 94256930 94257245 -158999338 - AluY SINE Alu -2 309 1 376 314 33 45 chr2 94257245 94257538 -158999045 - L1MC4a LINE L1 -1288 6520 6230 239 304 38 44 chr2 94257632 94257790 -158998793 + L1M4b LINE L1 97 253 -6606 1568 186 34 3 chr2 94258368 94258663 -158997920 - MER47A DNA MER2_type -57 309 6 1411 174 32 52 chr2 94258731 94259041 -158997542 + AluJo SINE Alu 1 304 -8 1008 275 69 34 chr2 94259230 94260112 -158996471 + L1M4b LINE L1 1481 2540 -4598 270 236 21 76 chr2 94260124 94260268 -158996315 + L1ME3 LINE L1 5888 6023 -139 535 233 101 31 chr2 94262099 94262258 -158994325 + MLT1B LTR MaLR 1 170 -220 5068 151 40 20 chr2 94264758 94265610 -158990973 - MER4D LTR ERV1 0 872 4 400 293 50 8 chr2 94265921 94266174 -158990409 - L1ME LINE L1 -5094 976 734 1323 204 23 26 chr2 94266364 94266668 -158989915 - AluJb SINE Alu -9 303 1 1545 212 3 3 chr2 94266733 94267040 -158989543 + MER47A DNA MER2_type 3 309 -57 433 314 36 10 chr2 94269208 94269402 -158987181 + MIR SINE MIR 64 262 0 248 172 0 17 chr2 94270250 94270308 -158986275 + T-rich Low_complexity Low_complexity 4 60 0 2722 128 8 32 chr2 94270311 94270812 -158985771 - L1P LINE L1 -1262 4884 4396 237 339 27 27 chr2 94270835 94270947 -158985636 - MIR SINE MIR -115 147 36 1507 290 52 17 chr2 94271075 94271655 -158984928 - L1ME1 LINE L1 -59 6107 5508 499 273 0 23 chr2 94272317 94272445 -158984138 + FLAM_C SINE Alu 3 127 -16 1147 194 12 20 chr2 94272571 94272818 -158983765 - L1MB3 LINE L1 -1 6182 5938 1867 238 28 26 chr2 94272818 94273281 -158983302 - MER70A LTR ERVL -1 471 8 16959 197 26 16 chr2 94273293 94276603 -158979980 - MER70A-int LTR ERVL 0 5023 1679 2355 133 104 54 chr2 94277452 94278546 -158978037 + SATR1 Satellite Satellite 1 1148 0 2315 143 115 18 chr2 94278572 94279376 -158977207 + SATR1 Satellite Satellite 1 882 0 2269 180 122 15 chr2 94279404 94280230 -158976353 + SATR1 Satellite Satellite 1 914 -140 1305 171 19 56 chr2 94280227 94280496 -158976087 + THE1B LTR MaLR 106 364 0 * 11863 111 6 4 chr2 94280496 94282072 -158974511 + THE1B-int LTR MaLR 1 1579 -1 2187 123 69 29 chr2 94282073 94282423 -158974160 + THE1B LTR MaLR 1 364 0 257 191 15 0 chr2 94282435 94282503 -158974080 - L1MEc LINE L1 -3698 2946 2878 230 289 93 20 chr2 94282524 94282728 -158973855 - L1MEc LINE L1 -3965 2860 2642 405 269 59 59 chr2 94285224 94285462 -158971121 - L1ME3 LINE L1 -2 6160 5923 706 347 52 8 chr2 94285502 94285978 -158970605 - L1MEc LINE L1 -4576 2070 1574 960 210 30 5 chr2 94285979 94286179 -158970404 - L1PA16 LINE L1 0 6166 5962 1380 133 5 0 chr2 94286185 94286396 -158970187 + L1PA16 LINE L1 5760 5971 -195 670 274 55 25 chr2 94286399 94286761 -158969822 - L1MEc LINE L1 -4976 1566 1194 353 256 98 60 chr2 94288115 94288330 -158968253 - L1ME3 LINE L1 -28 6134 5912 1177 302 58 22 chr2 94288366 94289298 -158967285 - L1M4c LINE L1 -4571 2075 1112 1320 199 13 39 chr2 94289434 94289746 -158966837 - AluJb SINE Alu -8 304 1 1544 209 3 3 chr2 94289811 94290117 -158966466 + MER47A DNA MER2_type 3 308 -58 473 304 36 10 chr2 94292284 94292478 -158964105 + MIR SINE MIR 64 262 0 1135 128 12 0 chr2 94293779 94293943 -158962640 - AluSg/x SINE Alu -14 298 133 6508 217 54 31 chr2 94293954 94294405 -158962178 - MER66A-int LTR ERV1 -5058 1618 1179 1664 158 16 48 chr2 94294405 94294721 -158961862 - AluSx SINE Alu 0 312 7 6508 217 54 31 chr2 94294721 94295823 -158960760 - MER66A-int LTR ERV1 -5497 1179 30 1495 189 23 104 chr2 94295915 94296355 -158960228 - MER66A LTR ERV1 -46 432 29 215 299 45 0 chr2 94296920 94296987 -158959596 - MIR SINE MIR -90 118 49 1591 264 77 22 chr2 94297115 94297703 -158958880 - L1ME1 LINE L1 -28 6138 5519 619 204 0 0 chr2 94298372 94298480 -158958103 + FLAM_C SINE Alu 2 109 -34 333 0 0 0 chr2 94298488 94298525 -158958058 + (CA)n Simple_repeat Simple_repeat 2 38 0 765 231 31 13 chr2 94298633 94298862 -158957721 - L1MB3 LINE L1 -1 6182 5950 2386 213 21 21 chr2 94298875 94299345 -158957238 - MER70A LTR ERVL -2 470 1 2127 178 10 23 chr2 94299349 94299748 -158956835 - MER70A-int LTR ERVL -1 5022 4629 * 5930 197 14 1 chr2 94299743 94300833 -158955750 - HERVL LTR ERVL -2150 2873 1770 225 0 0 0 chr2 94300833 94300858 -158955725 + (A)n Simple_repeat Simple_repeat 1 25 0 240 310 35 14 chr2 94301066 94301208 -158955375 - LTR67 LTR ERVL -54 503 359 436 316 124 25 chr2 94302578 94302853 -158953730 - HERVL LTR ERVL -1309 4345 4044 1867 209 50 25 chr2 94304618 94304725 -158951858 + MER65C LTR ERV1 3 106 -355 2922 153 31 8 chr2 94304725 94305209 -158951374 + LOR1a LTR ERV1 1 495 -2 1867 209 50 25 chr2 94305209 94305545 -158951038 + MER65C LTR ERV1 106 457 -4 29 0 0 0 chr2 94306868 94306897 -158949686 + AT_rich Low_complexity Low_complexity 1 29 0 758 247 103 41 chr2 94307612 94308033 -158948550 - LTR48B LTR ERV1 -10 634 160 260 344 0 0 chr2 94308030 94308120 -158948463 - MER34 LTR ERV1 -452 90 1 * 1224 202 34 0 chr2 94308178 94308440 -158948143 - Tigger2a DNA MER2_type 0 444 174 324 162 108 14 chr2 94308444 94308518 -158948065 - Tigger2a DNA MER2_type -353 81 1 853 192 53 135 chr2 94308692 94309088 -158947495 + MLT1A1 LTR MaLR 1 430 -2 475 306 87 10 chr2 94309088 94309294 -158947289 + LTR16C LTR ERVL 186 407 -84 4798 166 54 16 chr2 94309511 94310348 -158946235 + MER4D LTR ERV1 4 872 0 568 224 119 57 chr2 94310565 94310624 -158945959 + MLT1D LTR MaLR 6 60 -445 3842 151 39 6 chr2 94310624 94311248 -158945335 + LTR9B LTR ERV1 1 644 0 568 224 119 57 chr2 94311248 94311398 -158945185 + MLT1D LTR MaLR 60 228 -277 1070 218 81 37 chr2 94311537 94312195 -158944388 - L1MDa LINE L1 -3634 2906 2222 383 242 117 72 chr2 94312200 94312423 -158944160 + MER2 DNA MER2_type 112 344 -1 232 215 96 111 chr2 94313618 94313753 -158942830 + MLT1H LTR MaLR 136 268 -281 1328 278 40 49 chr2 94313837 94314363 -158942220 - MLT1E LTR MaLR -22 571 51 2098 125 10 0 chr2 94314504 94314799 -158941784 - AluSx SINE Alu -14 298 1 500 359 45 5 chr2 94316003 94316223 -158940360 - MIR SINE MIR -7 255 27 2192 125 3 0 chr2 94316824 94317120 -158939463 - AluSq SINE Alu -16 297 1 2086 212 26 7 chr2 94317120 94317550 -158939033 - LTR58 LTR ERV1 -13 666 229 348 157 0 0 chr2 94317550 94317601 -158938982 - LTR58 LTR ERV1 -398 281 231 1974 143 7 0 chr2 94317601 94317895 -158938688 + AluSx SINE Alu 1 296 -16 1621 202 41 0 chr2 94317903 94318220 -158938363 - HERVL LTR ERVL -2924 2099 1770 544 321 80 29 chr2 94319790 94320167 -158936416 - HERVL LTR ERVL -1118 4536 4141 30 45 0 0 chr2 94320826 94320870 -158935713 + AT_rich Low_complexity Low_complexity 1 44 0 22 70 0 0 chr2 94320999 94321042 -158935541 + AT_rich Low_complexity Low_complexity 1 43 0 1709 230 47 18 chr2 94322069 94322177 -158934406 + MER65C LTR ERV1 1 104 -357 3151 138 38 0 chr2 94322177 94322656 -158933927 + LOR1a LTR ERV1 1 497 0 1709 230 47 18 chr2 94322656 94322991 -158933592 + MER65C LTR ERV1 104 457 -4 27 0 0 0 chr2 94324317 94324344 -158932239 + AT_rich Low_complexity Low_complexity 1 27 0 663 256 67 14 chr2 94325059 94325282 -158931301 - LTR48B LTR ERV1 -4 640 406 315 333 8 23 chr2 94325442 94325574 -158931009 - MER34 LTR ERV1 -412 130 1 1360 187 34 0 chr2 94325632 94325894 -158930689 - Tigger2a DNA MER2_type 0 444 174 344 207 73 12 chr2 94325892 94325974 -158930609 - Tigger2a DNA MER2_type -347 87 1 * 836 220 49 119 chr2 94326151 94326539 -158930044 + MLT1A1 LTR MaLR 4 430 -2 334 307 40 0 chr2 94326539 94326640 -158929943 + LTR16C LTR ERVL 186 290 -201 4878 168 39 18 chr2 94326959 94327811 -158928772 + MER4D LTR ERV1 3 872 0 1528 219 113 24 chr2 94328022 94328084 -158928499 + MLT1D LTR MaLR 3 58 -447 4112 152 34 2 chr2 94328084 94328708 -158927875 + LTR9B LTR ERV1 1 644 0 1528 219 113 24 chr2 94328708 94329107 -158927476 + MLT1D LTR MaLR 58 505 0 1180 263 13 74 chr2 94332037 94332428 -158924155 - MLT1A2 LTR MaLR -7 367 1 585 310 35 5 chr2 94333201 94333404 -158923179 + MER3 DNA MER1_type 1 209 0 941 344 29 30 chr2 94337283 94337941 -158918642 + HERVL LTR ERVL 2604 3260 -2232 289 329 59 69 chr2 94338453 94338946 -158917637 + HERVL LTR ERVL 3757 4244 -1410 307 404 19 6 chr2 94339936 94340097 -158916486 + MER5B DNA MER1_type 12 174 -4 194 284 15 15 chr2 94340122 94340189 -158916394 + MER5A DNA MER1_type 16 82 -107 911 239 73 52 chr2 94340195 94340634 -158915949 + L1MDa LINE L1 1031 1478 -5062 824 218 87 22 chr2 94340641 94340870 -158915713 + L1MDa LINE L1 1652 1895 -4645 4072 195 38 4 chr2 94340882 94341590 -158914993 + L1P4 LINE L1 1 732 -6055 18640 191 32 16 chr2 94341601 94344847 -158911736 + L1P4 LINE L1 959 4151 -2668 2092 133 0 0 chr2 94344847 94345140 -158911443 + AluSx SINE Alu 1 293 -19 357 24 0 0 chr2 94345140 94345182 -158911401 + (TA)n Simple_repeat Simple_repeat 2 43 0 18640 191 32 16 chr2 94345182 94345780 -158910803 + L1P4 LINE L1 4151 4738 -2081 1926 172 0 0 chr2 94345780 94346077 -158910506 - AluSx SINE Alu -15 297 1 18640 191 32 16 chr2 94346077 94347642 -158908941 + L1P4 LINE L1 4738 6442 -377 30 0 0 0 chr2 94348168 94348198 -158908385 + AT_rich Low_complexity Low_complexity 1 30 0 333 123 105 0 chr2 94349056 94349113 -158907470 - AluS SINE Alu -237 64 2 1935 147 20 0 chr2 94349114 94349413 -158907170 - AluSx SINE Alu -7 305 1 598 299 53 39 chr2 94349474 94349693 -158906890 - L1MEc LINE L1 -1891 4324 4095 249 57 0 0 chr2 94349693 94349728 -158906855 + (TG)n Simple_repeat Simple_repeat 2 36 0 598 299 53 39 chr2 94349728 94349923 -158906660 - L1MEc LINE L1 -2120 4095 3904 499 284 156 16 chr2 94349902 94350350 -158906233 - L1MEc LINE L1 -3526 2689 2179 * 268 290 48 27 chr2 94350635 94350821 -158905762 - L1MEc LINE L1 -4579 1817 1628 22 0 0 0 chr2 94352411 94352433 -158904150 + AT_rich Low_complexity Low_complexity 1 22 0 338 273 11 0 chr2 94354433 94354521 -158902062 - L1MC4 LINE L1 -1339 6703 6615 23 79 0 13 chr2 94354521 94354561 -158902022 + AT_rich Low_complexity Low_complexity 1 41 -34 1997 128 3 17 chr2 94354561 94354851 -158901732 - AluSx SINE Alu -26 286 1 23 79 0 13 chr2 94354851 94354886 -158901697 + AT_rich Low_complexity Low_complexity 41 75 0 1525 62 0 16 chr2 94355015 94355209 -158901374 - AluY SINE Alu -13 298 108 207 0 0 0 chr2 94355840 94355863 -158900720 + (T)n Simple_repeat Simple_repeat 1 23 0 719 181 81 100 chr2 94355875 94356134 -158900449 + MLT1D LTR MaLR 252 505 0 6518 186 36 7 chr2 94356447 94358339 -158898244 + L1P4 LINE L1 3872 5819 -346 2007 109 0 0 chr2 94359192 94359458 -158897125 - AluSg SINE Alu 0 310 45 1909 139 180 26 chr2 94360788 94361204 -158895379 + LTR12 LTR ERV1 1 480 -234 607 185 134 15 chr2 94361675 94361847 -158894736 + L1MA7 LINE L1 5912 6106 -185 1717 218 50 63 chr2 94361853 94362377 -158894206 - LTR26B LTR ERV1 -12 519 3 882 167 62 0 chr2 94362379 94362571 -158894012 + L1MA7 LINE L1 6088 6291 0 2431 257 77 44 chr2 94362641 94363749 -158892834 - L1MC4a LINE L1 -1402 6642 5499 491 60 24 71 chr2 94364040 94364124 -158892459 - AluY SINE Alu -237 81 2 325 289 67 52 chr2 94364340 94364534 -158892049 - L1ME3 LINE L1 -88 6074 5878 * 828 269 84 76 chr2 94364516 94365578 -158891005 - L1MC4a LINE L1 -4574 1989 780 724 225 50 11 chr2 94365673 94365855 -158890728 + MER47A DNA MER2_type 7 195 -171 689 279 77 44 chr2 94366307 94366895 -158889688 - L1M4 LINE L1 -1416 4730 4124 11411 184 37 5 chr2 94368414 94370513 -158886070 - MER70A-int LTR ERVL -1236 3787 1622 3624 223 51 5 chr2 94370513 94371609 -158884974 - MER70A-int LTR ERVL -3831 1192 1 1533 220 32 3 chr2 94371609 94371922 -158884661 - MER70A LTR ERVL 0 472 151 246 320 109 63 chr2 94371990 94372321 -158884262 + PABL_A LTR ERV1 1 346 -314 1502 108 0 0 chr2 94372518 94372713 -158883870 + AluSg/x SINE Alu 86 280 -32 1237 73 6 6 chr2 94372716 94372726 -158883857 + (GAAA)n Simple_repeat Simple_repeat 1 189 0 1237 73 6 6 chr2 94372726 94372905 -158883678 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 617 194 67 8 chr2 94372963 94373097 -158883486 + PABL_B LTR ERV1 511 652 -15 886 184 7 0 chr2 94373103 94373255 -158883328 - MER70A LTR ERVL -319 153 1 2319 221 43 14 chr2 94373263 94373819 -158882764 - L1MB3 LINE L1 -262 5921 5350 2292 146 31 48 chr2 94373819 94374367 -158882216 + MLT2A2 LTR ERVL 4 548 -6 1282 194 93 97 chr2 94374680 94374964 -158881619 + MLT1D LTR MaLR 33 316 -189 2643 64 0 0 chr2 94374964 94375275 -158881308 - AluY SINE Alu 0 311 1 1282 194 93 97 chr2 94375275 94375465 -158881118 + MLT1D LTR MaLR 316 505 0 183 42 0 0 chr2 94375705 94375729 -158880854 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 298 241 69 119 chr2 94376070 94376271 -158880312 + MIR3 SINE MIR 6 200 -62 434 287 50 28 chr2 94377311 94377492 -158879091 - MLT1L LTR MaLR -86 529 345 208 271 53 7 chr2 94378500 94378651 -158877932 + (TA)n Simple_repeat Simple_repeat 1 158 0 613 221 29 0 chr2 94379853 94379993 -158876590 + MER3 DNA MER1_type 11 154 -55 2331 177 32 6 chr2 94382902 94383575 -158873008 - L1PB2 LINE L1 -706 5445 4750 4440 116 8 18 chr2 94383577 94384294 -158872289 + L1PB2 LINE L1 5438 6147 -4 971 351 42 17 chr2 94385350 94386018 -158870565 + HERV16 LTR ERVL 2582 3263 -1901 210 174 0 0 chr2 94386405 94386451 -158870132 + A-rich Low_complexity Low_complexity 1 46 0 2123 107 0 4 chr2 94387527 94387808 -158868775 + AluSx SINE Alu 1 280 -32 592 25 37 0 chr2 94387808 94387889 -158868694 + (TAAAA)n Simple_repeat Simple_repeat 2 85 0 324 245 32 39 chr2 94387900 94388055 -158868528 + L1MC4a LINE L1 6370 6523 -1285 32 0 0 0 chr2 94388107 94388139 -158868444 + AT_rich Low_complexity Low_complexity 1 32 0 1179 265 45 32 chr2 94388141 94388635 -158867948 - L1MC4a LINE L1 -8 7800 7301 5137 69 1 0 chr2 94388678 94389329 -158867254 - L1PA7 LINE L1 -11 6143 5492 12428 89 4 3 chr2 94389329 94391194 -158865389 - L1PA7 LINE L1 -1321 4825 2960 291 28 0 0 chr2 94397368 94397404 -158859179 + (TG)n Simple_repeat Simple_repeat 2 37 0 235 244 7 82 chr2 94402329 94402464 -158854119 - L1ME3 LINE L1 -94 6068 5944 865 253 37 50 chr2 94402713 94403092 -158853491 - L1MC4a LINE L1 -139 7669 7296 1036 214 48 70 chr2 94403216 94403589 -158852994 + MLT1A1 LTR MaLR 1 365 0 621 213 25 35 chr2 94404104 94404301 -158852282 + MSTA-int LTR MaLR 1457 1651 0 2407 171 22 0 chr2 94404302 94404718 -158851865 + MSTA LTR MaLR 2 426 -2 2352 98 0 0 chr2 94404729 94405024 -158851559 - AluSc SINE Alu -10 299 5 450 295 32 13 chr2 94405043 94405199 -158851384 - MLT1A2 LTR MaLR -212 162 4 334 145 60 12 chr2 94405517 94405600 -158850983 - LTR52 LTR ERVL -334 87 1 1300 151 0 0 chr2 94406366 94406584 -158849999 + L1PA14 LINE L1 5942 6159 -2 8382 33 0 0 chr2 94407659 94409440 -158847143 + L1PA4 LINE L1 4370 6153 -2 236 254 0 0 chr2 94409473 94409532 -158847051 - L1MC5 LINE L1 -517 7444 7386 242 253 12 60 chr2 94410096 94410179 -158846404 + MLT1F LTR MaLR 108 186 -404 264 293 61 40 chr2 94410248 94410446 -158846137 + MLT1F LTR MaLR 336 537 -5 572 309 79 23 chr2 94410615 94411272 -158845311 + L1M4 LINE L1 4456 5149 -997 245 299 9 19 chr2 94411664 94411771 -158844812 + GA-rich Low_complexity Low_complexity 3 108 0 25 0 0 0 chr2 94413019 94413044 -158843539 + AT_rich Low_complexity Low_complexity 1 25 0 822 180 50 0 chr2 94413569 94413750 -158842833 + L1M4 LINE L1 5516 5706 -472 201 323 43 54 chr2 94413806 94413899 -158842684 + MIR SINE MIR 47 138 -70 898 290 72 34 chr2 94414418 94414845 -158841738 - L1ME3A LINE L1 -43 6363 5879 2264 89 0 0 chr2 94414845 94415174 -158841409 - AluSg SINE Alu 0 329 1 898 290 72 34 chr2 94415174 94415446 -158841137 - L1ME3A LINE L1 -527 5879 5619 555 288 101 28 chr2 94415582 94416148 -158840435 - L1ME3A LINE L1 -1417 4965 4359 2579 219 26 70 chr2 94416664 94417049 -158839534 + L1MA9 LINE L1 5398 5798 -514 198 0 0 0 chr2 94417049 94417071 -158839512 + (CA)n Simple_repeat Simple_repeat 1 22 0 2579 219 26 70 chr2 94417071 94417106 -158839477 + L1MA9 LINE L1 5798 5833 -479 183 42 0 0 chr2 94417106 94417130 -158839453 + (TTA)n Simple_repeat Simple_repeat 1 24 0 1729 118 39 50 chr2 94417137 94417417 -158839166 - AluSx SINE Alu -35 277 1 2579 219 26 70 chr2 94417417 94417899 -158838684 + L1MA9 LINE L1 5839 6274 -38 585 203 7 0 chr2 94418141 94418279 -158838304 + L1MA6 LINE L1 6161 6299 -1 412 273 84 42 chr2 94421146 94421384 -158835199 - L1ME3 LINE L1 0 6162 5915 799 281 73 42 chr2 94421415 94421580 -158835003 - L1MDb LINE L1 -4559 1825 1667 4577 116 35 42 chr2 94421580 94422363 -158834220 + MER4E LTR ERV1 1 777 -2 799 281 73 42 chr2 94422363 94422997 -158833586 - L1MDb LINE L1 -4717 1667 1022 1665 179 63 24 chr2 94423007 94423611 -158832972 + LTR8A LTR ERV1 1 675 -52 4993 89 16 3 chr2 94423611 94424293 -158832290 + LTR8 LTR ERV1 1 691 0 1665 179 63 24 chr2 94424293 94424349 -158832234 + LTR8A LTR ERV1 675 727 0 3036 132 4 2 chr2 94424481 94424944 -158831639 + MER1A DNA MER1_type 66 529 0 317 356 0 0 chr2 94424945 94425035 -158831548 + L1MC4a LINE L1 6467 6556 -1252 1162 263 76 11 chr2 94425093 94425564 -158831019 - L1MD3 LINE L1 -19 7976 7475 787 150 120 69 chr2 94427085 94427472 -158829111 - LTR7 LTR ERV1 0 450 1 401 53 0 18 chr2 94429090 94429147 -158827436 + (TAA)n Simple_repeat Simple_repeat 1 56 0 914 134 0 43 chr2 94429945 94430109 -158826474 - AluSp/q SINE Alu -2 311 155 259 265 71 20 chr2 94431476 94431574 -158825009 - LTR52 LTR ERVL -310 111 9 242 272 70 18 chr2 94431580 94431694 -158824889 - L1MDb LINE L1 -5947 425 306 386 280 124 11 chr2 94431782 94431968 -158824615 - MIR SINE MIR 0 262 56 572 251 71 103 chr2 94433490 94434111 -158822472 + L1ME3 LINE L1 3672 4272 -1874 639 255 78 106 chr2 94434131 94434189 -158822394 + L1ME3 LINE L1 4483 4541 -1605 957 9 45 0 chr2 94434189 94434299 -158822284 + L1PA4 LINE L1 6038 6152 -3 639 255 78 106 chr2 94434299 94434945 -158821638 + L1ME3 LINE L1 4541 5167 -979 381 258 62 47 chr2 94435003 94435131 -158821452 + L1ME3 LINE L1 5330 5459 -707 3381 193 63 15 chr2 94435153 94435837 -158820746 + LTR62 LTR ERVK 1 717 -2 2093 177 83 2 chr2 94435837 94436244 -158820339 - LTR47A LTR ERVL -11 441 2 1133 303 48 22 chr2 94436256 94436833 -158819750 + L1ME3 LINE L1 5477 6068 -94 423 0 0 0 chr2 94438283 94438330 -158818253 + (TAGA)n Simple_repeat Simple_repeat 3 49 0 1198 261 61 34 chr2 94439232 94439708 -158816875 + L1MC4a LINE L1 6445 6933 -875 1718 206 49 16 chr2 94439724 94440093 -158816490 - MSTD LTR MaLR -15 381 1 1096 192 80 0 chr2 94440093 94440317 -158816266 - MSTD-int LTR MaLR 0 1735 1494 328 238 16 0 chr2 94440317 94440380 -158816203 - MER2 DNA MER2_type 0 345 282 * 790 274 6 6 chr2 94440356 94440535 -158816048 - MER8 DNA MER2_type -60 179 1 1792 273 15 9 chr2 94440535 94440957 -158815626 - MSTD-int LTR MaLR -240 1495 1020 2865 3 0 3 chr2 94441299 94441608 -158814975 - AluY SINE Alu -3 308 1 339 327 115 25 chr2 94441895 94442173 -158814410 - MLT1L LTR MaLR -89 526 224 318 212 51 7 chr2 94442945 94443082 -158813501 + (TA)n Simple_repeat Simple_repeat 2 144 0 1052 208 81 92 chr2 94444064 94444424 -158812159 - MLT1A2 LTR MaLR -18 356 1 22 80 0 0 chr2 94444709 94444759 -158811824 + AT_rich Low_complexity Low_complexity 1 50 0 1999 144 7 0 chr2 94444983 94445289 -158811294 + AluSx SINE Alu 2 309 -3 21 36 0 0 chr2 94446301 94446329 -158810254 + AT_rich Low_complexity Low_complexity 1 28 0 28 29 0 0 chr2 94448191 94448226 -158808357 + AT_rich Low_complexity Low_complexity 1 35 0 1215 249 90 43 chr2 94449184 94449401 -158807182 - LTR55 LTR ERV -11 537 332 4485 86 39 5 chr2 94449401 94449986 -158806597 - LTR14B LTR ERVK 0 608 4 1215 249 90 43 chr2 94449986 94450281 -158806302 - LTR55 LTR ERV -216 332 1 1788 203 76 16 chr2 94451763 94452132 -158804451 + MSTB LTR MaLR 1 391 -35 669 243 56 98 chr2 94455162 94455499 -158801084 - MLT1A2 LTR MaLR -5 369 47 324 103 35 0 chr2 94455783 94455841 -158800742 - L1PA3 LINE L1 -2 6153 6094 2087 109 10 7 chr2 94457420 94457714 -158798869 - AluSx SINE Alu -17 295 1 1744 160 28 0 chr2 94460180 94460467 -158796116 - AluSx SINE Alu -16 296 2 1291 252 65 50 chr2 94461406 94461802 -158794781 - LTR55 LTR ERV -5 543 135 2176 102 0 3 chr2 94461802 94462097 -158794486 + AluY SINE Alu 1 294 -17 1291 252 65 50 chr2 94462097 94462235 -158794348 - LTR55 LTR ERV -413 135 1 2094 65 0 0 chr2 94462395 94462655 -158793928 + AluY SINE Alu 49 308 -3 201 39 0 0 chr2 94464062 94464088 -158792495 + (TAAAA)n Simple_repeat Simple_repeat 4 29 0 365 268 39 42 chr2 94465163 94465344 -158791239 + HERVL LTR ERVL 2952 3136 -1900 666 264 88 22 chr2 94465391 94465709 -158790874 + L1M4 LINE L1 2641 2979 -3167 388 260 83 80 chr2 94470187 94470475 -158786108 - L1ME3 LINE L1 0 6162 5874 1029 315 54 24 chr2 94470483 94471491 -158785092 - L1M4c LINE L1 -4575 2384 1346 2465 138 67 47 chr2 94472216 94472667 -158783916 + LTR46 LTR ERV1 1 460 0 752 217 40 11 chr2 94472703 94472878 -158783705 + Tigger1 DNA MER2_type 1 180 -2238 * 1105 180 38 14 chr2 94472850 94473061 -158783522 + Tigger1 DNA MER2_type 2202 2417 -1 291 230 103 23 chr2 94473739 94473826 -158782757 - L1M4c LINE L1 -6187 701 608 23 33 0 0 chr2 94474159 94474189 -158782394 + AT_rich Low_complexity Low_complexity 1 30 0 436 291 21 37 chr2 94474213 94474454 -158782129 - L1M4 LINE L1 -996 5150 4914 1004 239 51 42 chr2 94474487 94474821 -158781762 + MLT1A1 LTR MaLR 1 337 -28 2334 105 13 0 chr2 94474855 94475161 -158781422 - AluSg SINE Alu 0 310 1 1913 147 13 13 chr2 94475276 94475588 -158780995 - AluSx SINE Alu 0 312 1 2140 135 3 0 chr2 94475610 94475921 -158780662 - AluSx SINE Alu 0 312 1 333 162 8 43 chr2 94475983 94476100 -158780483 + (TA)n Simple_repeat Simple_repeat 2 114 0 239 89 0 0 chr2 94476111 94476156 -158780427 + LTR66 LTR ERVL 394 438 -172 403 237 101 24 chr2 94476156 94476325 -158780258 - L1M4 LINE L1 -1490 4656 4475 1760 88 0 0 chr2 94477106 94477322 -158779261 - AluSq SINE Alu -97 216 1 180 179 0 0 chr2 94478750 94478789 -158777794 + (TGGA)n Simple_repeat Simple_repeat 3 41 0 1471 275 92 9 chr2 94479698 94480855 -158775728 + L1MC4 LINE L1 6462 7893 -149 239 155 0 52 chr2 94480869 94480927 -158775656 + L1MC4 LINE L1 7988 8042 0 1680 201 3 0 chr2 94481189 94481482 -158775101 - AluJb SINE Alu -13 299 6 503 357 62 40 chr2 94482040 94482443 -158774140 + MER115 DNA AcHobo 125 536 -157 639 313 97 12 chr2 94482455 94482880 -158773703 + L1MEc LINE L1 50 510 -5886 246 292 44 9 chr2 94483097 94483210 -158773373 - LTR67 LTR ERVL -53 504 388 10342 147 11 1 chr2 94483591 94484791 -158771792 + L1PA10 LINE L1 3423 4609 -1559 2357 79 7 7 chr2 94484791 94485095 -158771488 + AluY SINE Alu 1 304 -7 10342 147 11 1 chr2 94485095 94486671 -158769912 + L1PA10 LINE L1 4609 6157 -11 279 265 0 12 chr2 94487056 94487139 -158769444 + (TA)n Simple_repeat Simple_repeat 2 83 0 241 209 37 127 chr2 94487442 94487576 -158769007 - MLT1H LTR MaLR -22 527 406 21 57 0 0 chr2 94487832 94487867 -158768716 + AT_rich Low_complexity Low_complexity 1 35 0 204 250 0 0 chr2 94488185 94488249 -158768334 + (CATATA)n Simple_repeat Simple_repeat 3 66 0 180 77 0 0 chr2 94488341 94488367 -158768216 + (CA)n Simple_repeat Simple_repeat 1 26 0 208 122 22 56 chr2 94488377 94488467 -158768116 + (TATAA)n Simple_repeat Simple_repeat 5 91 0 576 80 16 64 chr2 94488479 94488667 -158767916 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 43 35 0 0 chr2 94488667 94488724 -158767859 + AT_rich Low_complexity Low_complexity 1 57 0 304 11 103 23 chr2 94488725 94488812 -158767771 + (TA)n Simple_repeat Simple_repeat 1 94 0 251 273 0 0 chr2 94488815 94488881 -158767702 + (TATG)n Simple_repeat Simple_repeat 3 68 0 186 227 0 0 chr2 94488888 94488932 -158767651 + (CATATA)n Simple_repeat Simple_repeat 3 46 0 1389 170 16 8 chr2 94489005 94489258 -158767325 - L1PB3 LINE L1 -118 6036 5782 610 130 56 4 chr2 94489268 94489746 -158766837 + (TA)n Simple_repeat Simple_repeat 1 502 0 5954 103 12 0 chr2 94489769 94490442 -158766141 - L1PA10 LINE L1 0 6168 5505 1847 173 0 7 chr2 94490442 94490737 -158765846 - AluSx SINE Alu -8 304 12 5954 103 12 0 chr2 94490737 94491493 -158765090 - L1PA10 LINE L1 -663 5505 4742 700 203 14 7 chr2 94493494 94493632 -158762951 + MSTD LTR MaLR 1 139 -257 4103 199 25 7 chr2 94493651 94493728 -158762855 - LTR39 LTR ERV1 -7 776 702 237 33 0 0 chr2 94493728 94493758 -158762825 + (TTTG)n Simple_repeat Simple_repeat 4 33 0 4103 199 25 7 chr2 94493758 94494442 -158762141 - LTR39 LTR ERV1 -81 702 1 507 200 17 17 chr2 94494567 94494687 -158761896 + MSTD LTR MaLR 244 363 -2 364 259 106 24 chr2 94494720 94494890 -158761693 + LTR16C LTR ERVL 224 407 -84 204 246 47 23 chr2 94495162 94495333 -158761250 + (TA)n Simple_repeat Simple_repeat 1 175 0 897 257 31 63 chr2 94496843 94497189 -158759394 - MLT1A2 LTR MaLR -29 399 31 419 304 7 0 chr2 94498015 94498153 -158758430 + MER3 DNA MER1_type 18 156 -53 474 196 54 0 chr2 94501071 94501183 -158755400 + MER58 DNA MER1_type 2278 2395 -25 24 85 0 0 chr2 94501253 94501312 -158755271 + AT_rich Low_complexity Low_complexity 1 59 0 4915 55 2 0 chr2 94501470 94502069 -158754514 + L1PA5 LINE L1 5555 6154 0 589 224 154 39 chr2 94502811 94503070 -158753513 + MLT1D LTR MaLR 46 334 -171 1462 229 91 20 chr2 94503099 94503540 -158753043 - MLT1D LTR MaLR -7 498 27 216 0 0 0 chr2 94503540 94503564 -158753019 + (T)n Simple_repeat Simple_repeat 1 24 0 234 0 0 0 chr2 94503763 94503789 -158752794 + (CTG)n Simple_repeat Simple_repeat 2 27 0 487 296 106 31 chr2 94504059 94504380 -158752203 - LTR16C LTR ERVL -78 413 69 489 305 40 6 chr2 94506402 94506579 -158750004 - MLT1L LTR MaLR -91 524 342 2634 53 0 0 chr2 94506622 94506924 -158749659 - AluY SINE Alu -9 302 1 2209 104 0 47 chr2 94508597 94508914 -158747669 + AluSq SINE Alu 1 302 -11 225 0 0 0 chr2 94508944 94508969 -158747614 + (A)n Simple_repeat Simple_repeat 1 25 0 261 329 34 14 chr2 94509646 94509792 -158746791 - HERVL LTR ERVL -1335 4319 4171 189 74 0 0 chr2 94510469 94510496 -158746087 + (TA)n Simple_repeat Simple_repeat 1 27 0 326 188 94 51 chr2 94513355 94513472 -158743111 + LTR16C LTR ERVL 110 231 -260 336 277 20 10 chr2 94513509 94513610 -158742973 + MIR SINE MIR 45 146 -62 195 42 0 0 chr2 94513663 94513687 -158742896 + (GA)n Simple_repeat Simple_repeat 2 25 0 1125 262 111 25 chr2 94513958 94514389 -158742194 - MLT1D LTR MaLR -2 503 36 223 255 0 0 chr2 94514465 94514516 -158742067 + CT-rich Low_complexity Low_complexity 2 52 0 27 62 0 0 chr2 94515336 94515384 -158741199 + AT_rich Low_complexity Low_complexity 1 48 0 465 267 96 14 chr2 94515844 94515990 -158740593 + MER50 LTR ERV1 11 168 -566 196 89 22 22 chr2 94516059 94516104 -158740479 + (TAAAAA)n Simple_repeat Simple_repeat 3 47 0 28 0 0 0 chr2 94516106 94516134 -158740449 + AT_rich Low_complexity Low_complexity 1 28 0 365 191 9 0 chr2 94516152 94516267 -158740316 + (TA)n Simple_repeat Simple_repeat 1 116 0 1897 169 69 58 chr2 94516280 94516729 -158739854 + MER50 LTR ERV1 281 734 0 263 310 190 7 chr2 94517219 94517361 -158739222 - MLT1L LTR MaLR -92 523 356 28 48 0 0 chr2 94518323 94518365 -158738218 + AT_rich Low_complexity Low_complexity 1 42 0 823 231 19 99 chr2 94518675 94519019 -158737564 - MLT1B LTR MaLR -9 448 67 180 0 0 0 chr2 94519286 94519306 -158737277 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 3830 120 45 24 chr2 94520172 94520799 -158735784 - LTR9B LTR ERV1 0 644 5 733 165 0 0 chr2 94520853 94520962 -158735621 + HERVL18 LTR ERVL 4994 5102 -945 756 132 0 0 chr2 94521390 94521496 -158735087 - LTR8 LTR ERV1 0 691 586 372 74 37 0 chr2 94521498 94521552 -158735031 - LTR8A LTR ERV1 -671 56 1 2073 118 3 14 chr2 94522532 94522829 -158733754 - AluSx SINE Alu -18 294 1 448 166 28 6 chr2 94523972 94524072 -158732511 - LTR48B LTR ERV1 -3 784 534 4548 175 21 18 chr2 94524180 94525434 -158731149 + L1M1 LINE L1 4334 5586 -717 1556 258 74 29 chr2 94527014 94527721 -158728862 + L1M1 LINE L1 2130 2909 -4656 1894 174 52 33 chr2 94527721 94528089 -158728494 - THE1C LTR MaLR 0 375 1 1556 258 74 29 chr2 94528089 94528313 -158728270 + L1M1 LINE L1 2909 3122 -4443 1198 145 62 0 chr2 94528323 94528565 -158728018 - L1MA8 LINE L1 -4 6287 6031 5905 58 4 9 chr2 94529103 94529949 -158726634 + L1P LINE L1 1 969 -5177 250 182 0 55 chr2 94530578 94530633 -158725950 - L2 LINE L2 0 3313 3262 318 369 16 8 chr2 94530926 94531048 -158725535 + L2 LINE L2 3150 3272 0 382 268 93 39 chr2 94531638 94531970 -158724613 - LTR48 LTR ERV1 -120 524 157 964 258 80 59 chr2 94532282 94532433 -158724150 + MSTD LTR MaLR 1 147 -249 4594 190 9 16 chr2 94532433 94533222 -158723361 - LTR39 LTR ERV1 0 783 1 964 258 80 59 chr2 94533222 94533458 -158723125 + MSTD LTR MaLR 147 396 0 508 305 84 10 chr2 94533460 94533663 -158722920 + LTR16C LTR ERVL 190 407 -84 2103 127 3 0 chr2 94533762 94534053 -158722530 - AluSq SINE Alu -21 292 1 2125 97 3 3 chr2 94534203 94534492 -158722091 + AluSq SINE Alu 11 299 -14 1713 227 94 18 chr2 94534683 94535141 -158721442 + MLT1D LTR MaLR 13 505 0 305 298 78 40 chr2 94535726 94535907 -158720676 + MIR SINE MIR 6 197 -65 270 0 0 0 chr2 94535939 94535969 -158720614 + (TA)n Simple_repeat Simple_repeat 2 31 0 532 319 64 25 chr2 94536995 94537321 -158719262 - MLT1L LTR MaLR -86 529 191 556 144 21 10 chr2 94538207 94538304 -158718279 + MER4A LTR ERV1 1 98 -566 1578 159 164 75 chr2 94538304 94538675 -158717908 + MER4A LTR ERV1 261 664 0 621 248 43 114 chr2 94538931 94539230 -158717353 - MLT1A2 LTR MaLR -6 368 91 1838 96 33 15 chr2 94542244 94542515 -158714068 + AluSp SINE Alu 1 276 -37 378 0 0 0 chr2 94542523 94542565 -158714018 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 10399 249 18 21 chr2 94542655 94542774 -158713809 + L1PA15 LINE L1 2260 2378 -3768 2227 88 0 3 chr2 94542774 94543088 -158713495 + AluY SINE Alu 1 313 0 10399 249 18 21 chr2 94543088 94546069 -158710514 + L1PA15 LINE L1 2378 5352 -794 3486 136 12 4 chr2 94546474 94547053 -158709530 + L1PA15 LINE L1 5319 5900 -265 2207 123 0 0 chr2 94547122 94547431 -158709152 - AluSx SINE Alu -3 309 1 180 0 0 0 chr2 94548367 94548387 -158708196 + (T)n Simple_repeat Simple_repeat 1 20 0 269 298 24 12 chr2 94548569 94548653 -158707930 - HERVL LTR ERVL -1420 4234 4150 226 300 11 0 chr2 94549344 94549434 -158707149 + (TA)n Simple_repeat Simple_repeat 2 92 0 831 199 0 7 chr2 94550523 94550664 -158705919 - FLAM_C SINE Alu -2 141 2 272 241 36 48 chr2 94550884 94550967 -158705616 + MLT2E LTR ERVL 44 125 -503 189 0 0 0 chr2 94553651 94553672 -158702911 + (TG)n Simple_repeat Simple_repeat 1 21 0 441 292 83 45 chr2 94553749 94554037 -158702546 + LTR16C LTR ERVL 93 391 -100 1109 232 113 12 chr2 94554205 94554541 -158702042 + MLT1D LTR MaLR 136 505 0 218 349 0 0 chr2 94555172 94555235 -158701348 + MIR SINE MIR 45 107 -101 885 90 33 0 chr2 94555463 94555585 -158700998 - L1PA6 LINE L1 -1 6153 6028 882 87 0 24 chr2 94555585 94555712 -158700871 - L1P LINE L1 -3419 2727 2604 243 0 0 0 chr2 94555724 94555751 -158700832 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1681 136 0 70 chr2 94555753 94556055 -158700528 - AluY SINE Alu -30 281 1 928 221 75 110 chr2 94556258 94556749 -158699834 - MLT1D LTR MaLR -2 488 29 267 260 0 0 chr2 94557276 94557349 -158699234 + MER41A LTR ERV1 159 231 -323 737 209 84 83 chr2 94558076 94558440 -158698143 - MLT1A2 LTR MaLR -17 450 1 817 195 6 6 chr2 94561760 94561929 -158694654 + AluJb SINE Alu 1 169 -143 4850 56 2 90 chr2 94562752 94563913 -158692670 - SVA Other Other -723 1148 327 984 60 0 0 chr2 94563914 94564031 -158692552 - AluSq/x SINE Alu -174 138 22 761 172 23 16 chr2 94564062 94564190 -158692393 - FLAM_C SINE Alu -3 130 2 291 184 132 129 chr2 94564254 94564526 -158692057 - L1M3 LINE L1 -618 5553 5281 1928 162 0 0 chr2 94565517 94565813 -158690770 + AluSx SINE Alu 3 298 -14 30 0 0 0 chr2 94566083 94566113 -158690470 + AT_rich Low_complexity Low_complexity 1 30 0 1366 161 102 14 chr2 94566259 94566544 -158690039 + AluJo SINE Alu 1 310 -2 421 309 57 35 chr2 94566555 94566785 -158689798 + L1M4 LINE L1 173 407 -5906 2191 241 29 45 chr2 94567082 94567539 -158689044 + L1M4 LINE L1 798 1261 -5052 3276 173 20 74 chr2 94567539 94568269 -158688314 - LTR8 LTR ERV1 0 691 1 2191 241 29 45 chr2 94568269 94568692 -158687891 + L1M4 LINE L1 1261 1797 -4516 226 300 11 0 chr2 94569018 94569108 -158687475 + (TA)n Simple_repeat Simple_repeat 2 92 0 831 199 0 7 chr2 94570197 94570338 -158686245 - FLAM_C SINE Alu -2 141 2 272 241 36 48 chr2 94570558 94570641 -158685942 + MLT2E LTR ERVL 44 125 -503 189 0 0 0 chr2 94573325 94573346 -158683237 + (TG)n Simple_repeat Simple_repeat 1 21 0 441 292 83 45 chr2 94573423 94573711 -158682872 + LTR16C LTR ERVL 93 391 -100 1109 232 113 12 chr2 94573879 94574215 -158682368 + MLT1D LTR MaLR 136 505 0 531 258 74 27 chr2 94575003 94575201 -158681382 + ERVL LTR ERVL 2927 3176 -1900 511 251 97 83 chr2 94575215 94575429 -158681154 + L1M4 LINE L1 2844 3053 -3329 905 171 19 0 chr2 94575429 94575587 -158680996 + L1PB3 LINE L1 5987 6147 -7 511 251 97 83 chr2 94575587 94575866 -158680717 + L1M4 LINE L1 3053 3344 -3038 456 171 0 0 chr2 94576552 94576622 -158679961 - AluS SINE Alu -243 70 2 31 76 0 0 chr2 94576844 94576910 -158679673 + AT_rich Low_complexity Low_complexity 1 66 0 1555 194 29 0 chr2 94577134 94577413 -158679170 - AluJo SINE Alu -25 287 1 24 53 0 0 chr2 94577447 94577485 -158679098 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr2 94578316 94578338 -158678245 + AT_rich Low_complexity Low_complexity 1 22 0 235 244 112 46 chr2 94578382 94578579 -158678004 + L1M4 LINE L1 4826 5035 -1347 217 294 0 15 chr2 94578684 94578752 -158677831 + (TATG)n Simple_repeat Simple_repeat 2 68 0 627 206 0 0 chr2 94628752 94628883 -158627700 + Tigger5 DNA MER2_type 2135 2265 -58 509 294 36 10 chr2 94631050 94631244 -158625339 + MIR SINE MIR 64 262 0 1088 138 13 0 chr2 94632545 94632704 -158623879 - AluSg/x SINE Alu -19 293 133 5731 221 45 42 chr2 94632715 94633166 -158623417 - MER66A-int LTR ERV1 -5058 1618 1170 1769 151 16 32 chr2 94633166 94633477 -158623106 - AluSx SINE Alu 0 312 7 5731 221 45 42 chr2 94633477 94634608 -158621975 - MER66A-int LTR ERV1 -5506 1170 30 1281 194 25 103 chr2 94634700 94635138 -158621445 - MER66A LTR ERV1 -46 432 29 312 326 37 32 chr2 94635230 94635420 -158621163 + L1M3c LINE L1 3819 4009 -2373 219 299 45 0 chr2 94635703 94635770 -158620813 - MIR SINE MIR -90 118 49 1377 270 73 19 chr2 94635898 94636486 -158620097 - L1ME1 LINE L1 -28 6138 5519 601 193 0 0 chr2 94637155 94637264 -158619319 + AluJb SINE Alu 1 109 -203 225 0 0 0 chr2 94637272 94637297 -158619286 + (CA)n Simple_repeat Simple_repeat 2 26 0 699 239 26 9 chr2 94637409 94637635 -158618948 - L1MB3 LINE L1 -4 6179 5950 2206 211 21 21 chr2 94637648 94638118 -158618465 - MER70A LTR ERVL -2 470 1 1978 175 10 23 chr2 94638122 94638521 -158618062 - MER70A-int LTR ERVL -1 5022 4629 * 5516 195 14 1 chr2 94638516 94639606 -158616977 - HERVL LTR ERVL -2150 2873 1770 180 0 0 0 chr2 94639606 94639626 -158616957 + (A)n Simple_repeat Simple_repeat 1 20 0 362 310 43 27 chr2 94641345 94641532 -158615051 - HERVL LTR ERVL -1309 4345 4156 1679 214 49 25 chr2 94643350 94643457 -158613126 + MER65C LTR ERV1 3 106 -355 2680 151 31 10 chr2 94643457 94643942 -158612641 + LOR1a LTR ERV1 1 495 -2 1679 214 49 25 chr2 94643942 94644282 -158612301 + MER65C LTR ERV1 106 461 0 28 0 0 0 chr2 94645601 94645629 -158610954 + AT_rich Low_complexity Low_complexity 1 28 0 671 228 76 9 chr2 94646368 94646579 -158610004 - LTR48B LTR ERV1 -14 630 406 231 344 0 0 chr2 94646780 94646870 -158609713 - MER34 LTR ERV1 -452 90 1 1125 199 38 0 chr2 94646928 94647189 -158609394 - Tigger2a DNA MER2_type 0 444 174 293 162 108 14 chr2 94647193 94647267 -158609316 - Tigger2a DNA MER2_type -353 81 1 719 198 55 135 chr2 94647442 94647826 -158608757 + MLT1A1 LTR MaLR 1 353 -12 383 316 87 10 chr2 94647837 94648043 -158608540 + LTR16C LTR ERVL 186 407 -84 4424 164 54 17 chr2 94648262 94649100 -158607483 + MER4D LTR ERV1 4 872 0 502 216 120 58 chr2 94649319 94649376 -158607207 + MLT1D LTR MaLR 8 60 -445 3636 144 39 6 chr2 94649376 94650000 -158606583 + LTR9B LTR ERV1 1 644 0 502 216 120 58 chr2 94650000 94650150 -158606433 + MLT1D LTR MaLR 60 228 -277 873 229 79 33 chr2 94650288 94650952 -158605631 - L1MDa LINE L1 -3634 2906 2215 341 216 27 0 chr2 94651100 94651174 -158605409 + MER2 DNA MER2_type 269 344 -1 1166 275 41 50 chr2 94652588 94653129 -158603454 - MLT1E LTR MaLR -22 571 36 2056 130 10 0 chr2 94653255 94653548 -158603035 - AluSx SINE Alu -16 296 1 502 356 50 5 chr2 94654752 94654971 -158601612 - MIR SINE MIR -7 255 27 2373 110 3 0 chr2 94655572 94655880 -158600703 - AluSq SINE Alu -4 309 1 1920 209 26 7 chr2 94655880 94656310 -158600273 - LTR58 LTR ERV1 -13 666 229 326 143 0 0 chr2 94656310 94656359 -158600224 - LTR58 LTR ERV1 -398 281 233 2076 138 0 0 chr2 94656361 94656658 -158599925 + AluSx SINE Alu 1 297 -15 1481 200 41 0 chr2 94656668 94656983 -158599600 - HERVL LTR ERVL -2926 2097 1770 427 308 85 35 chr2 94658558 94658935 -158597648 - HERVL LTR ERVL -1118 4536 4141 36 53 0 0 chr2 94659582 94659639 -158596944 + AT_rich Low_complexity Low_complexity 1 57 0 22 70 0 0 chr2 94659768 94659811 -158596772 + AT_rich Low_complexity Low_complexity 1 43 0 1518 230 47 18 chr2 94660838 94660946 -158595637 + MER65C LTR ERV1 1 104 -357 3012 133 33 0 chr2 94660946 94661427 -158595156 + LOR1a LTR ERV1 1 497 0 1518 230 47 18 chr2 94661427 94661762 -158594821 + MER65C LTR ERV1 104 457 -4 27 0 0 0 chr2 94663088 94663115 -158593468 + AT_rich Low_complexity Low_complexity 1 27 0 16000 183 20 14 chr2 94663146 94665017 -158591566 + L1P4 LINE L1 1726 3584 -2584 2243 128 0 0 chr2 94665017 94665329 -158591254 + AluSx SINE Alu 1 312 0 387 0 0 0 chr2 94665331 94665374 -158591209 + (TA)n Simple_repeat Simple_repeat 1 43 0 16000 183 20 14 chr2 94665374 94665979 -158590604 + L1P4 LINE L1 3584 4184 -1984 1899 181 0 0 chr2 94665979 94666277 -158590306 - AluSx SINE Alu -14 298 1 16000 183 20 14 chr2 94666277 94667842 -158588741 + L1P4 LINE L1 4184 5789 -379 30 0 0 0 chr2 94668368 94668398 -158588185 + AT_rich Low_complexity Low_complexity 1 30 0 342 88 105 0 chr2 94669256 94669313 -158587270 - AluS SINE Alu -238 64 2 1892 146 30 0 chr2 94669314 94669609 -158586974 - AluSx SINE Alu -8 304 1 417 304 57 32 chr2 94669670 94669889 -158586694 - L1MEc LINE L1 -1891 4324 4091 285 51 0 0 chr2 94669889 94669928 -158586655 + (TG)n Simple_repeat Simple_repeat 2 40 0 417 304 57 32 chr2 94669928 94670080 -158586503 - L1MEc LINE L1 -2124 4091 3944 402 257 170 12 chr2 94670105 94670447 -158586136 - L1MEc LINE L1 -3529 2686 2291 21 0 0 0 chr2 94670467 94670488 -158586095 + AT_rich Low_complexity Low_complexity 1 21 0 433 296 48 27 chr2 94670835 94671021 -158585562 - L1MEc LINE L1 -4579 1817 1628 22 0 0 0 chr2 94672605 94672627 -158583956 + AT_rich Low_complexity Low_complexity 1 22 0 303 284 0 32 chr2 94674627 94674722 -158581861 - L1MC4 LINE L1 -1339 6703 6612 24 54 0 18 chr2 94674729 94674749 -158581834 + AT_rich Low_complexity Low_complexity 1 20 -35 2020 117 3 17 chr2 94674749 94675039 -158581544 - AluSx SINE Alu -26 286 1 24 54 0 18 chr2 94675039 94675074 -158581509 + AT_rich Low_complexity Low_complexity 20 55 0 1452 90 0 15 chr2 94675203 94675403 -158581180 - AluY SINE Alu -7 304 108 732 181 81 100 chr2 94676056 94676315 -158580268 + MLT1D LTR MaLR 252 505 0 6517 189 36 6 chr2 94676628 94678507 -158578076 + L1P4 LINE L1 3872 5808 -357 1991 111 0 0 chr2 94679367 94679629 -158576954 - AluSg SINE Alu -4 306 45 1885 144 180 26 chr2 94680959 94681375 -158575208 + LTR12 LTR ERV1 1 480 -234 186 217 87 0 chr2 94681583 94681629 -158574954 - L2 LINE L2 -11 3302 3253 595 185 134 15 chr2 94681843 94682015 -158574568 + L1MA7 LINE L1 5912 6106 -185 1777 215 50 65 chr2 94682021 94682546 -158574037 - LTR26B LTR ERV1 -12 519 3 919 156 62 0 chr2 94682548 94682740 -158573843 + L1MA7 LINE L1 6088 6291 0 2542 257 68 44 chr2 94682803 94683928 -158572655 - L1MC4a LINE L1 -1395 6413 5263 547 50 25 25 chr2 94684219 94684299 -158572284 - AluY SINE Alu -237 81 2 342 284 67 52 chr2 94684514 94684708 -158571875 - L1ME3 LINE L1 -88 6074 5878 * 785 289 77 77 chr2 94684696 94685755 -158570828 - L1M4c LINE L1 -4546 1838 780 724 225 50 11 chr2 94685850 94686032 -158570551 + MER47A DNA MER2_type 7 195 -171 708 275 77 41 chr2 94686484 94687070 -158569513 - L1MC4a LINE L1 -1416 4730 4124 11205 188 39 5 chr2 94688586 94690682 -158565901 - MER70A-int LTR ERVL -1236 3787 1622 3633 219 53 7 chr2 94690682 94691778 -158564805 - MER70A-int LTR ERVL -3831 1192 1 1487 225 39 3 chr2 94691778 94692089 -158564494 - MER70A LTR ERVL 0 472 151 237 323 109 63 chr2 94692157 94692488 -158564095 + PABL_A LTR ERV1 1 346 -314 1479 133 9 0 chr2 94692685 94692895 -158563688 + AluSg/x SINE Alu 86 297 -15 452 97 0 14 chr2 94692913 94692985 -158563598 + (GGAA)n Simple_repeat Simple_repeat 2 72 0 692 169 21 21 chr2 94692985 94693127 -158563456 + PABL_B LTR ERV1 511 652 -15 886 184 7 0 chr2 94693133 94693285 -158563298 - MER70B LTR ERVL -425 153 1 2307 223 43 14 chr2 94693293 94693849 -158562734 - L1MB3 LINE L1 -262 5921 5350 2306 144 36 50 chr2 94693849 94694399 -158562184 + MLT2A2 LTR ERVL 4 554 0 1336 187 92 97 chr2 94694709 94694994 -158561589 + MLT1D LTR MaLR 32 316 -189 2593 65 0 0 chr2 94694994 94695304 -158561279 - AluY SINE Alu -1 310 1 1336 187 92 97 chr2 94695304 94695494 -158561089 + MLT1D LTR MaLR 316 505 0 183 42 0 0 chr2 94695734 94695758 -158560825 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 296 241 69 119 chr2 94696098 94696299 -158560284 + MIR3 SINE MIR 6 200 -62 449 282 50 28 chr2 94697336 94697517 -158559066 - MLT1L LTR MaLR -86 529 345 225 255 57 6 chr2 94698476 94698633 -158557950 + (TA)n Simple_repeat Simple_repeat 1 165 0 641 229 29 0 chr2 94699878 94700018 -158556565 + MER3 DNA MER1_type 11 154 -55 2544 180 32 6 chr2 94702893 94703587 -158552996 - L1M3 LINE L1 -692 5479 4759 5003 104 8 22 chr2 94703587 94704319 -158552264 + L1PB2 LINE L1 5430 6151 0 1130 342 47 22 chr2 94705381 94706042 -158550541 + HERV16 LTR ERVL 2582 3256 -1901 237 163 0 0 chr2 94706437 94706486 -158550097 + A-rich Low_complexity Low_complexity 1 49 0 331 248 37 94 chr2 94707442 94707571 -158549012 + L1MC4a LINE L1 6242 6377 -1431 2141 103 0 4 chr2 94707571 94707852 -158548731 + AluSx SINE Alu 1 280 -32 638 12 37 0 chr2 94707852 94707933 -158548650 + (TAAAA)n Simple_repeat Simple_repeat 2 85 0 331 248 37 94 chr2 94707933 94708101 -158548482 + L1MC4a LINE L1 6375 6523 -1285 32 0 0 0 chr2 94708153 94708185 -158548398 + AT_rich Low_complexity Low_complexity 1 32 0 1398 266 45 30 chr2 94708187 94708680 -158547903 - L1MC4a LINE L1 -8 7800 7301 5494 72 0 0 chr2 94708721 94709373 -158547210 - L1PA7 LINE L1 -11 6143 5492 13281 93 4 3 chr2 94709373 94711237 -158545346 - L1PA7 LINE L1 -1321 4825 2960 236 163 75 75 chr2 94715161 94715241 -158541342 + LTR33A LTR ERVL 444 523 0 219 36 0 0 chr2 94717415 94717443 -158539140 + (TG)n Simple_repeat Simple_repeat 2 29 0 24 0 0 0 chr2 94717461 94717485 -158539098 + AT_rich Low_complexity Low_complexity 1 24 0 281 259 12 68 chr2 94722370 94722532 -158534051 - L1ME3 LINE L1 -94 6068 5916 1019 248 36 52 chr2 94722746 94723133 -158533450 - L1MC4a LINE L1 -132 7676 7296 1237 206 48 70 chr2 94723257 94723630 -158532953 + MLT1A1 LTR MaLR 1 365 0 723 208 25 35 chr2 94724145 94724342 -158532241 + MSTA-int LTR MaLR 1457 1651 0 2635 170 19 0 chr2 94724343 94724760 -158531823 + MSTA LTR MaLR 2 426 -2 2343 104 0 0 chr2 94724771 94725068 -158531515 - AluSc SINE Alu -8 301 5 490 269 45 26 chr2 94725089 94725245 -158531338 - MLT1A2 LTR MaLR -212 162 4 26 0 0 0 chr2 97727005 97727031 -155529552 + AT_rich Low_complexity Low_complexity 1 26 0 1887 159 3 3 chr2 97727040 97727336 -155529247 - AluJo SINE Alu -16 296 1 2448 64 0 13 chr2 97727337 97727650 -155528933 - AluY SINE Alu -2 309 1 330 318 149 0 chr2 97727659 97727766 -155528817 - MIR SINE MIR -120 142 20 343 318 19 0 chr2 97728091 97728198 -155528385 - L2 LINE L2 0 3272 3164 420 304 7 14 chr2 97728742 97728880 -155527703 - MIR3 SINE MIR -39 169 33 224 329 0 0 chr2 97729605 97729684 -155526899 + G-rich Low_complexity Low_complexity 2 80 0 241 281 88 0 chr2 97730306 97730388 -155526195 + MIR SINE MIR 82 172 -90 266 333 58 6 chr2 97730656 97730812 -155525771 - MIR3 SINE MIR -25 183 20 197 336 80 0 chr2 97731637 97731762 -155524821 + MIR3 SINE MIR 15 149 -59 315 275 44 50 chr2 97731873 97732016 -155524567 + MIR3 SINE MIR 3 156 -52 228 359 94 24 chr2 97732023 97732193 -155524390 - MER117 DNA MER1_type 0 197 16 261 246 174 58 chr2 97732212 97732350 -155524233 + MIR SINE MIR 72 225 -37 249 325 104 13 chr2 97732481 97732635 -155523948 + MIR SINE MIR 81 248 -14 386 308 53 30 chr2 97733082 97733348 -155523235 + L2 LINE L2 2870 3141 -131 192 77 0 0 chr2 97735726 97735752 -155520831 + (TCC)n Simple_repeat Simple_repeat 2 27 0 248 233 23 23 chr2 97737059 97737145 -155519438 + G-rich Low_complexity Low_complexity 2 87 0 210 353 9 26 chr2 97739793 97739909 -155516674 + L2 LINE L2 2918 3031 -241 362 295 312 13 chr2 97740578 97741273 -155515310 + L2 LINE L2 1103 2005 -1309 623 259 117 5 chr2 97741339 97741536 -155515047 + MER20 DNA MER1_type 1 219 0 249 248 69 20 chr2 97741628 97741729 -155514854 + L2 LINE L2 2244 2349 -965 433 314 192 30 chr2 97741849 97742438 -155514145 + L2 LINE L2 2552 3313 0 1226 151 5 0 chr2 97746153 97746339 -155510244 + AluSx SINE Alu 1 187 -125 2775 182 121 11 chr2 97746453 97747073 -155509510 + L1MB8 LINE L1 4910 5460 -718 2268 97 0 0 chr2 97747073 97747363 -155509220 + AluSg SINE Alu 6 295 -15 2775 182 121 11 chr2 97747363 97747738 -155508845 + L1MB8 LINE L1 5460 6012 -166 612 275 158 29 chr2 97747769 97748060 -155508523 - L1ME LINE L1 -521 5643 5391 1836 153 7 13 chr2 97748060 97748368 -155508215 - AluSx SINE Alu -6 306 1 612 275 158 29 chr2 97748368 97748443 -155508140 - L1ME LINE L1 -773 5391 5327 2112 104 10 0 chr2 97748443 97748740 -155507843 + AluSq SINE Alu 1 300 -13 612 275 158 29 chr2 97748740 97749288 -155507295 - L1ME LINE L1 -837 5327 4851 1875 134 0 0 chr2 97749288 97749556 -155507027 + AluSx SINE Alu 39 306 -6 612 275 158 29 chr2 97749556 97750098 -155506485 - L1ME LINE L1 -1313 4851 3996 390 332 126 41 chr2 97751606 97752043 -155504540 - L1ME LINE L1 -2970 3176 2656 476 252 144 47 chr2 97756600 97756941 -155499642 - LTR16A1 LTR ERVL -73 384 11 2246 68 31 0 chr2 97757342 97757634 -155498949 - AluY SINE Alu -10 301 1 662 147 0 28 chr2 97757831 97757940 -155498643 + FLAM_A SINE Alu 17 122 -20 381 256 73 6 chr2 97759031 97759195 -155497388 + C-rich Low_complexity Low_complexity 5 179 0 267 195 149 0 chr2 97759554 97759641 -155496942 - L1ME3A LINE L1 -9 6161 6062 806 126 16 0 chr2 97760099 97760226 -155496357 + L1MA9 LINE L1 6184 6312 0 2069 102 3 32 chr2 97760300 97760613 -155495970 + AluSg SINE Alu 5 308 -2 1518 114 197 8 chr2 97760616 97760870 -155495713 + AluSg1 SINE Alu 1 302 -7 1535 191 58 0 chr2 97760935 97761228 -155495355 + L1MB2 LINE L1 5859 6168 -3 211 206 0 63 chr2 97761320 97761383 -155495200 + (GGGTG)n Simple_repeat Simple_repeat 3 61 0 388 252 151 14 chr2 97761791 97761930 -155494653 - MIR SINE MIR -5 257 100 2611 87 107 13 chr2 97762007 97762042 -155494541 - MER1A DNA MER1_type -2173 529 499 2249 112 0 0 chr2 97762042 97762346 -155494237 - AluSq SINE Alu -9 304 1 2611 87 107 13 chr2 97762346 97762760 -155493823 - MER1A DNA MER1_type -2203 499 38 3113 176 79 44 chr2 97765896 97766715 -155489868 + L1MB7 LINE L1 4653 5719 -465 1971 121 17 7 chr2 97766715 97767012 -155489571 - AluSq SINE Alu -13 300 1 3113 176 79 44 chr2 97767012 97767471 -155489112 + L1MB7 LINE L1 5719 6160 -24 2103 100 4 0 chr2 97767618 97767928 -155488655 - AluSx SINE Alu 0 312 2 522 0 0 0 chr2 97767928 97767986 -155488597 + (TTTTA)n Simple_repeat Simple_repeat 2 59 0 1610 91 5 0 chr2 97767986 97768195 -155488388 - AluSp SINE Alu -30 283 74 1128 119 109 0 chr2 97768296 97768498 -155488085 - LTR8 LTR ERV1 -464 227 4 2737 3 0 3 chr2 97770889 97771195 -155485388 - AluY SINE Alu -6 305 1 210 345 11 35 chr2 97773548 97773635 -155482948 + MIR SINE MIR 122 206 -56 553 263 76 36 chr2 97773663 97773964 -155482619 - L1MC4 LINE L1 -138 7904 7592 1468 184 41 20 chr2 97773970 97774263 -155482320 - AluJo SINE Alu -6 306 8 761 187 15 0 chr2 97775734 97775868 -155480715 - AluJb SINE Alu -176 136 1 227 269 128 0 chr2 97776221 97776299 -155480284 - MER5A DNA MER1_type -101 88 1 604 178 51 98 chr2 97777094 97777330 -155479253 - L1MC5 LINE L1 -36 7925 7701 1938 149 7 3 chr2 97777335 97777624 -155478959 - AluJb SINE Alu -22 290 1 1259 161 14 5 chr2 97777657 97777868 -155478715 + AluJb SINE Alu 93 305 -7 2246 103 3 7 chr2 97777868 97778170 -155478413 + AluSx SINE Alu 1 301 -11 1197 268 86 36 chr2 97778203 97778681 -155477902 - L1MC4a LINE L1 -876 6932 6431 2334 103 0 3 chr2 97778781 97779083 -155477500 - AluSx SINE Alu -11 301 1 277 261 36 39 chr2 97779085 97779250 -155477333 - MER68 LTR ERV1 -82 480 275 1827 163 7 3 chr2 97779257 97779557 -155477026 + AluJb SINE Alu 1 301 -11 226 47 70 0 chr2 97779566 97779609 -155476974 + T-rich Low_complexity Low_complexity 2 47 0 2084 106 3 34 chr2 97779611 97779904 -155476679 - AluSq SINE Alu -29 284 1 1528 387 3 0 chr2 97779931 97780241 -155476342 + AluSp SINE Alu 1 311 -2 * 1863 134 4 7 chr2 97780239 97780515 -155476068 - AluSx SINE Alu -37 275 1 2181 109 0 0 chr2 97780523 97780832 -155475751 - AluSx SINE Alu 0 309 1 1130 190 105 8 chr2 97780837 97781084 -155475499 - MER68 LTR ERV1 -291 271 1 404 114 0 29 chr2 97782329 97782399 -155474184 - AluJb SINE Alu -166 136 69 21 36 0 0 chr2 97782618 97782646 -155473937 + AT_rich Low_complexity Low_complexity 1 28 0 261 0 0 0 chr2 97783104 97783133 -155473450 + (TTTTTG)n Simple_repeat Simple_repeat 3 31 0 189 0 0 0 chr2 97785161 97785182 -155471401 + (TCCTG)n Simple_repeat Simple_repeat 2 22 0 2036 104 4 11 chr2 97785205 97785485 -155471098 - AluSg SINE Alu -30 280 3 1613 147 0 26 chr2 97785489 97785761 -155470822 - AluSx SINE Alu -19 293 29 1828 142 7 30 chr2 97785783 97786079 -155470504 - AluSx SINE Alu -23 289 1 404 171 200 0 chr2 97787011 97787100 -155469483 + FLAM_A SINE Alu 1 96 -37 372 221 23 12 chr2 97787311 97787397 -155469186 - LTR67 LTR ERVL -7 550 464 244 292 56 0 chr2 97787789 97787861 -155468722 - MIR SINE MIR -95 113 38 1077 123 26 0 chr2 97787961 97788116 -155468467 - AluSg/x SINE Alu -25 285 127 256 158 0 0 chr2 97788122 97788160 -155468423 - Alu SINE Alu -262 38 1 1562 167 20 46 chr2 97788162 97788467 -155468116 - AluJb SINE Alu -15 297 1 197 344 45 51 chr2 97788539 97788696 -155467887 - L2 LINE L2 0 3272 3117 666 246 0 0 chr2 97788945 97789071 -155467512 + FLAM_A SINE Alu 1 126 -7 25 0 0 0 chr2 97789096 97789121 -155467462 + AT_rich Low_complexity Low_complexity 1 25 0 1578 170 36 18 chr2 97789390 97789667 -155466916 + AluJb SINE Alu 10 291 -21 3912 211 39 17 chr2 97789683 97790641 -155465942 + L1M4 LINE L1 3732 4710 -1436 2014 124 31 3 chr2 97790793 97791083 -155465500 + AluSx SINE Alu 1 298 -14 1907 134 7 7 chr2 97791090 97791367 -155465216 + AluSq SINE Alu 1 277 -36 302 200 67 67 chr2 97791387 97791477 -155465106 + L1MD2 LINE L1 6033 6122 -237 1965 122 27 3 chr2 97791484 97791778 -155464805 - AluSg SINE Alu -9 301 1 2442 77 7 0 chr2 97791791 97792090 -155464493 - AluSp SINE Alu -11 302 2 2438 74 0 7 chr2 97792104 97792402 -155464181 - AluY SINE Alu -15 296 1 384 287 180 19 chr2 97792883 97793159 -155463424 - L1MC4 LINE L1 -91 7951 7616 2277 114 0 0 chr2 97793159 97793457 -155463126 - AluSx SINE Alu -14 298 1 384 287 180 19 chr2 97793457 97793497 -155463086 - L1MC4 LINE L1 -426 7616 7584 342 198 198 0 chr2 97793535 97793626 -155462957 + MER5B DNA MER1_type 1 109 -69 463 184 195 32 chr2 97793780 97793965 -155462618 - MIR SINE MIR 0 262 48 181 0 69 0 chr2 97794118 97794147 -155462436 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 335 125 54 4 chr2 97794155 97794214 -155462369 - MER4E LTR ERV1 -70 594 527 1531 179 42 14 chr2 97794221 97794506 -155462077 - AluJo SINE Alu -19 293 1 1405 187 70 4 chr2 97794528 97794801 -155461782 - AluJb SINE Alu -19 293 3 22 0 0 0 chr2 97795359 97795381 -155461202 + AT_rich Low_complexity Low_complexity 1 22 0 2298 102 0 0 chr2 97795402 97795696 -155460887 - AluSg1 SINE Alu -15 294 1 2152 102 3 20 chr2 97795759 97796062 -155460521 + AluSq SINE Alu 1 298 -15 304 188 31 0 chr2 97796204 97796268 -155460315 - MLT1J LTR MaLR -104 407 342 419 170 43 11 chr2 97796298 97796392 -155460191 + MER5B DNA MER1_type 82 178 0 558 201 181 0 chr2 97796434 97796578 -155460005 + MIR SINE MIR 80 249 -13 257 296 28 0 chr2 97796596 97796667 -155459916 - L3 LINE CR1 -428 1149 1077 730 229 176 0 chr2 97796743 97796987 -155459596 - MLT1J LTR MaLR -222 289 3 2401 87 0 3 chr2 97797299 97797599 -155458984 - AluSc SINE Alu -5 304 6 2144 103 17 0 chr2 97797978 97798270 -155458313 + AluSx SINE Alu 1 297 -15 216 0 0 0 chr2 97798663 97798687 -155457896 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2076 126 0 0 chr2 97798695 97798972 -155457611 - AluSx SINE Alu -35 277 1 205 288 203 0 chr2 97799114 97799232 -155457351 - MIR3 SINE MIR -26 182 41 2204 154 105 14 chr2 97799367 97799795 -155456788 - MLT1C LTR MaLR 0 467 1 825 122 89 0 chr2 97800827 97800950 -155455633 - AluSg/x SINE Alu -15 297 164 626 224 0 24 chr2 97801096 97801261 -155455322 - L1M4 LINE L1 -885 5261 5101 201 74 0 0 chr2 97801263 97801290 -155455293 + (TA)n Simple_repeat Simple_repeat 1 27 0 1102 103 0 19 chr2 97801301 97801457 -155455126 - AluSc SINE Alu -29 280 128 3827 193 67 65 chr2 97801457 97802619 -155453964 - L1M4 LINE L1 -1042 5104 3941 2131 117 0 0 chr2 97802620 97803081 -155453502 + AluSx SINE Alu 1 461 0 391 257 19 10 chr2 97803103 97803421 -155453162 + GA-rich Low_complexity Low_complexity 1 320 0 430 158 10 50 chr2 97803523 97803624 -155452959 + L1MB5 LINE L1 5237 5333 -813 803 211 6 12 chr2 97803624 97803790 -155452793 + FRAM SINE Alu 1 164 -12 2267 72 0 7 chr2 97803795 97804072 -155452511 + AluSq SINE Alu 2 276 -37 2143 174 32 34 chr2 97804103 97804569 -155452014 + L1MB5 LINE L1 5367 5831 -343 585 301 104 30 chr2 97804567 97805068 -155451515 + L1M4 LINE L1 2230 2767 -3379 * 679 280 57 0 chr2 97805084 97805277 -155451306 - MER3 DNA MER1_type 0 209 6 306 303 11 0 chr2 97805354 97805443 -155451140 + L1MC4 LINE L1 7803 7892 -150 200 324 27 0 chr2 97805448 97805522 -155451061 + GA-rich Low_complexity Low_complexity 4 79 0 302 276 17 9 chr2 97805523 97805639 -155450944 + L1MC4 LINE L1 7922 8038 -4 664 262 29 32 chr2 97805657 97805970 -155450613 + L1M4 LINE L1 2853 3164 -2982 347 321 121 32 chr2 97806238 97806553 -155450030 + L1M4 LINE L1 4143 4485 -1661 1069 98 58 195 chr2 97806555 97806832 -155449751 - Tigger5 DNA MER2_type 0 2323 2085 * 1165 224 9 22 chr2 97806828 97807060 -155449523 - Tigger5 DNA MER2_type -2091 232 4 344 262 69 14 chr2 97807062 97807207 -155449376 + L1M4 LINE L1 4485 4637 -1509 709 233 67 10 chr2 97807215 97807588 -155448995 + MLT1C LTR MaLR 6 461 -6 471 296 65 36 chr2 97807812 97808121 -155448462 + L1M4 LINE L1 4942 5269 -877 693 218 168 0 chr2 97808121 97808300 -155448283 + MER3 DNA MER1_type 1 209 0 471 296 65 36 chr2 97808300 97808433 -155448150 + L1M4 LINE L1 5269 5397 -749 2358 113 0 0 chr2 97808445 97808912 -155447671 - AluSq SINE Alu 0 467 1 1428 193 4 0 chr2 97809292 97809536 -155447047 + AluJb SINE Alu 1 245 -67 255 125 0 0 chr2 97809552 97809592 -155446991 + (TA)n Simple_repeat Simple_repeat 1 40 0 22 0 0 0 chr2 97809595 97809617 -155446966 + AT_rich Low_complexity Low_complexity 1 22 0 1361 169 219 22 chr2 97809702 97810117 -155446466 + LTR54B LTR ERV1 1 497 -1 1567 137 148 0 chr2 97810460 97810723 -155445860 - AluJb SINE Alu 0 302 1 1163 142 0 28 chr2 97810942 97811118 -155445465 - AluJo SINE Alu -141 171 1 2119 155 29 39 chr2 97811148 97811562 -155445021 - L1MB3 LINE L1 0 6183 5774 835 219 8 2 chr2 97811562 97811812 -155444771 + Tigger7 DNA MER2_type 8 316 -234 567 82 41 10 chr2 97811809 97811906 -155444677 + Tigger7 DNA MER2_type 2302 2401 -90 * 531 200 0 36 chr2 97811911 97812021 -155444562 + FLAM_C SINE Alu 5 110 -33 261 0 0 0 chr2 97812021 97812050 -155444533 + (TC)n Simple_repeat Simple_repeat 1 29 0 * 330 26 0 0 chr2 97812049 97812088 -155444495 + (CA)n Simple_repeat Simple_repeat 1 39 0 430 171 19 67 chr2 97812097 97812202 -155444381 + Tigger7 DNA MER2_type 2392 2491 0 1055 156 0 22 chr2 97812202 97812381 -155444202 - L1MB3 LINE L1 -400 5783 5609 2666 29 3 19 chr2 97813798 97814113 -155442470 + AluY SINE Alu 2 311 0 461 274 30 2 chr2 97814190 97814378 -155442205 + L1P5 LINE L1 5264 5439 -715 206 250 0 0 chr2 97814787 97814831 -155441752 + (CA)n Simple_repeat Simple_repeat 2 45 0 930 121 21 0 chr2 97814971 97815111 -155441472 + FLAM_C SINE Alu 1 143 0 212 170 0 75 chr2 97815119 97815172 -155441411 + G-rich Low_complexity Low_complexity 4 52 0 21 0 0 0 chr2 97815234 97815255 -155441328 + AT_rich Low_complexity Low_complexity 1 21 0 2472 93 0 0 chr2 97815697 97816007 -155440576 + AluSx SINE Alu 1 310 -2 662 320 63 57 chr2 97816420 97816911 -155439672 + L1MEc LINE L1 107 600 -5796 678 191 32 0 chr2 97816960 97817086 -155439497 + FLAM_A SINE Alu 1 130 -3 409 229 0 0 chr2 97817211 97817294 -155439289 + AluJ SINE Alu 40 122 -190 1118 144 6 6 chr2 97817337 97817510 -155439073 + AluJ SINE Alu 129 301 -11 261 303 37 37 chr2 97817525 97817634 -155438949 + MLT1-int LTR MaLR 756 864 -507 945 222 35 13 chr2 97817639 97817869 -155438714 + MLT1A2 LTR MaLR 132 366 -8 3335 75 2 0 chr2 97818074 97818500 -155438083 + L1PA8 LINE L1 5746 6172 0 1684 176 82 82 chr2 97818743 97819169 -155437414 + MLT1F LTR MaLR 117 542 0 714 258 52 26 chr2 97819200 97819433 -155437150 - LTR16A LTR ERVL 0 450 212 243 259 94 0 chr2 97819594 97819679 -155436904 - L1M4 LINE L1 -1310 4836 4744 1319 197 70 68 chr2 97819930 97820217 -155436366 - MER82 DNA MER2_type -1 652 362 848 173 0 0 chr2 97820217 97820350 -155436233 + FLAM_C SINE Alu 1 133 0 1319 197 70 68 chr2 97820350 97820417 -155436166 - MER82 DNA MER2_type -291 362 297 893 83 0 0 chr2 97820428 97820549 -155436034 - L1PA8 LINE L1 0 6487 6367 6447 77 26 57 chr2 97820555 97822880 -155433703 - SVA Other Other -518 1386 10 23007 112 8 9 chr2 97822880 97829235 -155427348 - L1PA8 LINE L1 -106 6381 6 1451 193 11 4 chr2 97829242 97829516 -155427067 - MER82 DNA MER2_type -369 284 9 291 271 199 20 chr2 97830017 97830168 -155426415 - MIR SINE MIR 0 262 85 909 272 125 17 chr2 97830199 97830657 -155425926 - MER115 DNA AcHobo 0 4031 184 2038 139 43 45 chr2 97830665 97831040 -155425543 - THE1C LTR MaLR -1 374 1 207 238 0 0 chr2 97832508 97832550 -155424033 - MIR SINE MIR -4 258 217 183 167 0 0 chr2 97832599 97832635 -155423948 - MIR SINE MIR -170 92 57 * 438 247 20 47 chr2 97832633 97832749 -155423834 + MIR SINE MIR 74 187 -75 2575 148 31 0 chr2 97832749 97833162 -155423421 + MSTB LTR MaLR 1 426 0 438 247 20 47 chr2 97833162 97833195 -155423388 + MIR SINE MIR 187 219 -43 308 138 86 0 chr2 97833451 97833509 -155423074 + L1MEc LINE L1 35 97 -6299 248 53 26 0 chr2 97833512 97833550 -155423033 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1153 297 34 23 chr2 97833603 97834081 -155422502 - LTR45 LTR ERV1 -39 486 4 1442 275 79 21 chr2 97834122 97834732 -155421851 + L1MEc LINE L1 111 755 -5641 2121 131 0 0 chr2 97834754 97835081 -155421502 - AluSc SINE Alu 0 327 1 346 267 0 9 chr2 97835121 97835226 -155421357 + L1MEc LINE L1 747 850 -5546 2468 180 27 7 chr2 97835227 97835676 -155420907 - LTR24 LTR ERV1 0 467 10 438 280 9 27 chr2 97835705 97835930 -155420653 + L1MEc LINE L1 852 1072 -5324 2211 103 0 30 chr2 97835938 97836240 -155420343 - AluSg SINE Alu -17 293 1 1424 189 0 0 chr2 97836245 97836488 -155420095 - AluSg/x SINE Alu 0 312 70 259 264 77 26 chr2 97836495 97836650 -155419933 + L1MEc LINE L1 1205 1367 -4848 3116 55 0 0 chr2 97836656 97837040 -155419543 - L1PA5 LINE L1 -1 6153 5770 38207 34 27 1 chr2 97837060 97842497 -155414086 - L1PA3 LINE L1 -1 6154 578 757 50 0 20 chr2 97842464 97842563 -155414020 - L1PA3 LINE L1 -6048 98 2 * 1641 21 0 0 chr2 97842566 97842752 -155413831 - L1P2 LINE L1 -370 5784 5599 3523 104 9 68 chr2 97842752 97843326 -155413257 - LTR8 LTR ERV1 -151 540 1 1289 126 29 67 chr2 97843338 97843576 -155413007 + LTR24C LTR ERV1 1 229 -406 1894 123 49 87 chr2 97843577 97843967 -155412616 - THE1C LTR MaLR 0 375 1 9849 108 1 115 chr2 97843967 97845749 -155410834 - THE1C-int LTR MaLR 0 1580 2 1836 132 97 23 chr2 97845750 97846099 -155410484 - THE1C LTR MaLR 0 375 1 1882 136 161 3 chr2 97846099 97846453 -155410130 + LTR24C LTR ERV1 226 635 0 2898 155 71 45 chr2 97846474 97847081 -155409502 - LTR8A LTR ERV1 -7 720 98 719 55 0 0 chr2 97847081 97847172 -155409411 - LTR8A LTR ERV1 -567 160 70 1983 130 7 14 chr2 97847172 97847457 -155409126 + AluSq SINE Alu 1 283 -30 633 93 0 0 chr2 97847469 97847555 -155409028 - LTR8A LTR ERV1 -641 86 1 1966 161 71 27 chr2 97847574 97847983 -155408600 - MER34C LTR ERV1 0 585 159 2547 64 0 6 chr2 97847985 97848296 -155408287 + AluSc SINE Alu 1 309 0 1459 161 28 20 chr2 97848310 97848558 -155408025 + LTR8 LTR ERV1 442 691 0 903 184 6 0 chr2 97848576 97848744 -155407839 + MER67C LTR ERV1 529 697 -13 1957 158 11 20 chr2 97848745 97849094 -155407489 - MER31A LTR ERV1 0 485 140 1932 154 20 0 chr2 97849109 97849415 -155407168 + AluSx SINE Alu 1 312 0 4772 180 83 79 chr2 97849443 97850485 -155406098 - MER31A-int LTR ERV1 -209 4727 3690 1820 181 10 0 chr2 97850485 97850794 -155405789 + AluSx SINE Alu 1 312 0 4772 180 83 79 chr2 97850794 97850880 -155405703 - MER31A-int LTR ERV1 -1246 3690 3606 1800 163 3 33 chr2 97850880 97851180 -155405403 - AluJb SINE Alu -21 291 1 4772 180 83 79 chr2 97851180 97851392 -155405191 - MER31A-int LTR ERV1 -1330 3606 3381 890 124 1 5 chr2 97851407 97851565 -155405018 - MER83-int LTR ERV1 -355 4525 3731 958 192 39 39 chr2 97851622 97851898 -155404685 - MER83-int LTR ERV1 -2891 3707 2413 251 122 0 110 chr2 97851902 97851958 -155404625 - MER83-int LTR ERV1 -3113 3485 3439 8321 183 52 55 chr2 97851958 97853719 -155402864 - MER52A LTR ERV1 0 1755 1 251 122 0 110 chr2 97853719 97853744 -155402839 - MER83-int LTR ERV1 -3159 3439 3413 8927 154 33 7 chr2 97853772 97854992 -155401591 - MER83-int LTR ERV1 -800 4080 2893 2221 129 0 3 chr2 97854992 97855302 -155401281 - AluSg SINE Alu -1 309 1 8927 154 33 7 chr2 97855302 97856039 -155400544 - MER83-int LTR ERV1 -1987 2893 12 2715 127 72 0 chr2 97856039 97856457 -155400126 - MER83 LTR ERV1 0 448 1 2737 192 33 106 chr2 97856704 97857573 -155399010 - MER31A-int LTR ERV1 -2306 2630 1844 1984 119 82 23 chr2 97857573 97857927 -155398656 + THE1C LTR MaLR 1 375 0 2737 192 33 106 chr2 97857927 97858068 -155398515 - MER31A-int LTR ERV1 -3092 1844 1694 907 223 0 0 chr2 97858081 97858256 -155398327 + FRAM SINE Alu 2 176 0 451 232 8 15 chr2 97858261 97858391 -155398192 - MER31A-int LTR ERV1 -3269 1667 1315 1085 181 22 41 chr2 97858515 97858786 -155397797 - MER31A-int LTR ERV1 -3421 1515 1250 1370 98 10 10 chr2 97858791 97858984 -155397599 - AluSg/x SINE Alu -11 301 109 625 97 65 73 chr2 97858993 97859101 -155397482 - MER31A-int LTR ERV1 -3730 1206 1098 1646 143 107 0 chr2 97859101 97859373 -155397210 - AluSx SINE Alu -11 301 1 625 97 65 73 chr2 97859373 97859388 -155397195 - MER31A-int LTR ERV1 -3838 1098 1084 2843 224 41 20 chr2 97859448 97860150 -155396433 - MER31A-int LTR ERV1 -4018 918 202 763 188 74 13 chr2 97860249 97860398 -155396185 + AluJo SINE Alu 2 159 -153 2283 140 29 0 chr2 97860398 97860747 -155395836 + THE1B LTR MaLR 6 364 0 661 175 50 8 chr2 97860750 97860870 -155395713 + AluJo SINE Alu 158 282 -30 207 0 0 0 chr2 97860872 97860895 -155395688 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 9516 135 16 28 chr2 97860993 97863010 -155393573 + L1PA8 LINE L1 739 2754 -3707 2354 36 0 0 chr2 97863010 97863284 -155393299 + L1PA2 LINE L1 5877 6155 0 * 19844 110 8 4 chr2 97863282 97867017 -155389566 + L1PA8 LINE L1 2738 6485 -2 536 213 64 35 chr2 97867057 97867198 -155389385 - MER31A-int LTR ERV1 -4779 157 13 2600 108 3 18 chr2 97867220 97867601 -155388982 + THE1C LTR MaLR 1 375 0 1547 180 69 47 chr2 97867635 97868057 -155388526 - MER31A LTR ERV1 -9 476 46 216 0 0 0 chr2 97868098 97868122 -155388461 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 2168 96 0 0 chr2 97868126 97868397 -155388186 - AluSx SINE Alu -37 275 5 430 136 15 0 chr2 97868401 97868467 -155388116 + MLT1B LTR MaLR 324 390 0 1030 225 41 134 chr2 97868612 97868787 -155387796 - LTR49 LTR ERV1 -11 584 394 2274 104 3 0 chr2 97868787 97869084 -155387499 - AluSq SINE Alu -15 298 1 1030 225 41 134 chr2 97869084 97869224 -155387359 - LTR49 LTR ERV1 -201 394 242 1830 131 13 51 chr2 97869224 97869536 -155387047 + AluJo SINE Alu 5 304 -8 1030 225 41 134 chr2 97869536 97869859 -155386724 - LTR49 LTR ERV1 -353 242 5 314 192 0 5 chr2 97870298 97870363 -155386220 - AluSx SINE Alu -2 300 243 4412 78 0 0 chr2 97870363 97870917 -155385666 - MER41A LTR ERV1 0 554 1 1527 167 4 4 chr2 97870917 97871163 -155385420 - AluSx SINE Alu -66 246 1 516 225 7 46 chr2 97871164 97871315 -155385268 - MLT1A2 LTR MaLR -207 167 23 494 122 22 44 chr2 97871318 97871408 -155385175 - MER34B LTR ERV1 -4 561 474 2258 77 47 17 chr2 97871409 97871709 -155384874 + AluSx SINE Alu 1 309 -3 392 145 48 36 chr2 97871752 97871835 -155384748 - LTR48 LTR ERV1 -90 697 614 642 106 65 198 chr2 97871848 97871925 -155384658 - LTR49 LTR ERV1 -239 356 270 1975 162 0 6 chr2 97871925 97872239 -155384344 + AluJo SINE Alu 1 312 0 642 106 65 198 chr2 97872239 97872378 -155384205 - LTR49 LTR ERV1 -325 270 169 2045 112 3 17 chr2 97872836 97873130 -155383453 + AluSx SINE Alu 1 290 -22 180 97 0 0 chr2 97873133 97873164 -155383419 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 950 140 0 56 chr2 97873245 97873424 -155383159 - LTR49 LTR ERV1 -424 171 3 231 125 0 0 chr2 97873424 97873454 -155383129 - MLT1A2 LTR MaLR -344 30 1 775 120 8 45 chr2 97873737 97873870 -155382713 - LTR35 LTR ERV1 -2 616 489 293 109 51 36 chr2 97873891 97874028 -155382555 + HERV17 LTR ERV1 711 849 -7777 204 111 0 0 chr2 97874031 97874067 -155382516 + (GA)n Simple_repeat Simple_repeat 2 37 0 1842 138 68 67 chr2 97874067 97874394 -155382189 - LTR35 LTR ERV1 -103 515 125 1816 169 7 7 chr2 97874394 97874696 -155381887 - AluJb SINE Alu -10 302 1 1842 138 68 67 chr2 97874696 97874822 -155381761 - LTR35 LTR ERV1 -493 125 1 3380 126 21 4 chr2 97874838 97875353 -155381230 - LTR45 LTR ERV1 0 525 2 1818 136 91 0 chr2 97875387 97875673 -155380910 + AluSx SINE Alu 1 312 0 219 174 93 47 chr2 97875909 97875995 -155380588 - MIR3 SINE MIR -54 154 65 468 305 32 13 chr2 97876375 97876529 -155380054 - MLT1L LTR MaLR -2 613 457 1563 176 35 18 chr2 97876542 97876826 -155379757 + AluJo SINE Alu 5 293 -19 2619 64 0 0 chr2 97877057 97877368 -155379215 + AluY SINE Alu 1 311 0 504 241 83 15 chr2 97877382 97877515 -155379068 - MLT1L LTR MaLR -354 261 120 565 192 58 0 chr2 97878344 97878448 -155378135 - AluJ SINE Alu -14 298 189 8287 198 55 10 chr2 97878450 97880109 -155376474 + MER52A LTR ERV1 22 1755 0 769 129 0 68 chr2 97880113 97880245 -155376338 - AluJ SINE Alu -126 186 64 2364 73 0 26 chr2 97880252 97880555 -155376028 + AluY SINE Alu 1 295 -16 682 153 18 94 chr2 97880693 97880863 -155375720 - MLT1C LTR MaLR 0 467 311 466 127 0 0 chr2 97880863 97880926 -155375657 + AluS SINE Alu 1 63 -255 2067 131 3 0 chr2 97880926 97881217 -155375366 + AluSx SINE Alu 13 304 -8 336 162 74 57 chr2 97881217 97881344 -155375239 - MLT1B LTR MaLR -126 264 171 3582 166 26 3 chr2 97881369 97882048 -155374535 - L1MB3 LINE L1 -35 6148 5454 300 136 0 0 chr2 97882048 97882092 -155374491 - MLT1B LTR MaLR -231 159 116 555 141 107 8 chr2 97882101 97882222 -155374361 + MLT1C LTR MaLR 1 133 -334 180 0 0 0 chr2 97882274 97882294 -155374289 + (T)n Simple_repeat Simple_repeat 1 20 0 2197 89 3 71 chr2 97882314 97882638 -155373945 + AluSq SINE Alu 1 302 -11 443 121 15 0 chr2 97882842 97882908 -155373675 - AluJ/FLAM SINE Alu -244 68 2 309 275 49 25 chr2 97882911 97883040 -155373543 - L1ME LINE L1 -421 5700 5565 449 283 113 79 chr2 97883192 97883686 -155372897 - MLT1J LTR MaLR 0 511 1 591 166 0 0 chr2 97884037 97884194 -155372389 + (TG)n Simple_repeat Simple_repeat 1 157 0 4567 228 65 51 chr2 97884194 97884601 -155371982 + MLT-int LTR MaLR 6 406 -1329 1694 118 87 49 chr2 97884601 97884889 -155371694 + AluJb SINE Alu 1 299 -13 4567 228 65 51 chr2 97884889 97884900 -155371683 + MLT-int LTR MaLR 406 415 -1320 2269 111 0 3 chr2 97884900 97885198 -155371385 + AluSx SINE Alu 11 307 -5 4567 228 65 51 chr2 97885198 97886096 -155370487 + MLT-int LTR MaLR 415 1342 -393 * 22335 102 3 2 chr2 97886094 97889477 -155367106 + L1P LINE L1 1598 4984 -1162 368 145 48 36 chr2 97889649 97889732 -155366851 - LTR48 LTR ERV1 -90 697 614 486 116 74 204 chr2 97889745 97889822 -155366761 - LTR49 LTR ERV1 -239 356 271 1915 194 0 6 chr2 97889822 97890136 -155366447 + AluJo SINE Alu 1 312 0 486 116 74 204 chr2 97890136 97890274 -155366309 - LTR49 LTR ERV1 -324 271 169 2075 111 3 17 chr2 97890736 97891064 -155365519 + AluSx SINE Alu 1 324 0 910 151 0 56 chr2 97891145 97891324 -155365259 - LTR49 LTR ERV1 -424 171 3 707 135 8 45 chr2 97891638 97891771 -155364812 - LTR35 LTR ERV1 -2 616 489 268 109 51 36 chr2 97891788 97891925 -155364658 + HERV17 LTR ERV1 711 849 -7777 266 114 0 0 chr2 97891928 97891972 -155364611 + (GA)n Simple_repeat Simple_repeat 2 45 0 1725 138 68 67 chr2 97891972 97892299 -155364284 - LTR35 LTR ERV1 -103 515 125 1850 169 7 7 chr2 97892299 97892601 -155363982 - AluJb SINE Alu -10 302 1 1725 138 68 67 chr2 97892601 97892727 -155363856 - LTR35 LTR ERV1 -493 125 1 3426 126 21 4 chr2 97892743 97893258 -155363325 - LTR45 LTR ERV1 0 525 2 1844 136 91 0 chr2 97893292 97893578 -155363005 + AluSx SINE Alu 1 312 0 262 174 93 47 chr2 97893814 97893900 -155362683 - MIR3 SINE MIR -54 154 65 455 305 32 13 chr2 97894280 97894434 -155362149 - MLT1L LTR MaLR -2 613 457 1563 176 35 18 chr2 97894447 97894731 -155361852 + AluJo SINE Alu 5 293 -19 2619 64 0 0 chr2 97894962 97895273 -155361310 + AluY SINE Alu 1 311 0 504 241 83 15 chr2 97895287 97895420 -155361163 - MLT1L LTR MaLR -354 261 120 565 192 58 0 chr2 97896249 97896353 -155360230 - AluJ SINE Alu -14 298 189 8252 197 57 10 chr2 97896355 97898011 -155358572 + MER52A LTR ERV1 22 1755 0 769 129 0 68 chr2 97898015 97898147 -155358436 - AluJ SINE Alu -126 186 64 2373 72 0 26 chr2 97898154 97898458 -155358125 + AluY SINE Alu 1 296 -15 682 153 18 94 chr2 97898596 97898766 -155357817 - MLT1C LTR MaLR 0 467 311 466 127 0 0 chr2 97898766 97898829 -155357754 + AluS SINE Alu 1 63 -255 2076 130 3 0 chr2 97898829 97899121 -155357462 + AluSx SINE Alu 13 305 -7 336 162 74 57 chr2 97899121 97899248 -155357335 - MLT1B LTR MaLR -126 264 171 3582 166 26 3 chr2 97899273 97899952 -155356631 - L1MB3 LINE L1 -35 6148 5454 300 136 0 0 chr2 97899952 97899996 -155356587 - MLT1B LTR MaLR -231 159 116 555 141 107 8 chr2 97900005 97900126 -155356457 + MLT1C LTR MaLR 1 133 -334 180 0 0 0 chr2 97900178 97900198 -155356385 + (T)n Simple_repeat Simple_repeat 1 20 0 2190 89 3 71 chr2 97900218 97900543 -155356040 + AluSq SINE Alu 1 303 -10 443 121 15 0 chr2 97900747 97900813 -155355770 - AluJ/FLAM SINE Alu -244 68 2 309 275 49 25 chr2 97900816 97900945 -155355638 - L1ME LINE L1 -421 5700 5565 443 283 113 81 chr2 97901097 97901592 -155354991 - MLT1J LTR MaLR 0 511 1 591 166 0 0 chr2 97901943 97902100 -155354483 + (TG)n Simple_repeat Simple_repeat 1 157 0 6214 222 70 40 chr2 97902100 97902507 -155354076 + MSTD-int LTR MaLR 6 399 -1336 1693 132 77 38 chr2 97902507 97902794 -155353789 + AluJb SINE Alu 1 298 -14 6214 222 70 40 chr2 97902794 97902805 -155353778 + MSTD-int LTR MaLR 399 408 -1327 2015 130 3 10 chr2 97902805 97903104 -155353479 + AluSx SINE Alu 11 307 -5 6214 222 70 40 chr2 97903104 97904361 -155352222 + MSTD-int LTR MaLR 408 1732 -3 331 180 0 0 chr2 97904362 97904423 -155352160 + MSTD LTR MaLR 1 61 -335 216 0 0 0 chr2 97904424 97904448 -155352135 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1360 112 10 5 chr2 97904450 97904646 -155351937 - AluSg/x SINE Alu -31 281 85 668 234 105 75 chr2 97904646 97904980 -155351603 + MSTD LTR MaLR 53 396 0 1045 220 217 17 chr2 97905085 97905660 -155350923 + LTR50 LTR ERVL 2 773 0 2390 103 0 10 chr2 97906016 97906326 -155350257 - AluSx SINE Alu -5 307 1 2002 155 0 16 chr2 97906446 97906756 -155349827 + AluJo SINE Alu 1 305 -7 2179 113 10 13 chr2 97907869 97908169 -155348414 + AluSx SINE Alu 1 299 -13 529 269 164 65 chr2 97908174 97908638 -155347945 - L2 LINE L2 0 3313 2804 2336 154 37 40 chr2 97908699 97908914 -155347669 + MSTA LTR MaLR 1 216 -212 2176 138 0 0 chr2 97908914 97909218 -155347365 - AluSx SINE Alu -8 304 1 2336 154 37 40 chr2 97909218 97909431 -155347152 + MSTA LTR MaLR 216 428 0 225 65 0 0 chr2 97909450 97909481 -155347102 + (CA)n Simple_repeat Simple_repeat 2 32 0 3121 139 52 102 chr2 97909609 97910323 -155346260 - MER54B LTR ERVL -115 678 1 1609 169 28 65 chr2 97910355 97910645 -155345938 + AluJo SINE Alu 1 279 -33 207 88 0 0 chr2 97910653 97910687 -155345896 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1932 141 0 61 chr2 97910732 97911058 -155345525 - AluJb SINE Alu -6 306 1 1875 146 7 42 chr2 97911062 97911371 -155345212 - AluJb SINE Alu -14 298 1 820 239 54 43 chr2 97911811 97912144 -155344439 + L1ME LINE L1 1014 1342 -5292 2386 37 54 14 chr2 97912144 97912439 -155344144 + AluY SINE Alu 1 307 -4 820 239 54 43 chr2 97912439 97912478 -155344105 + L1ME LINE L1 1342 1379 -5255 1965 147 11 0 chr2 97912478 97912764 -155343819 + AluSx SINE Alu 24 312 0 820 239 54 43 chr2 97912764 97912776 -155343807 + L1ME LINE L1 1379 1389 -5245 1733 152 47 30 chr2 97912776 97913072 -155343511 + AluJo SINE Alu 1 301 -11 2262 127 0 0 chr2 97913072 97913372 -155343211 + AluSx SINE Alu 1 300 -12 820 239 54 43 chr2 97913372 97913423 -155343160 + L1ME LINE L1 1389 1438 -5196 1864 169 3 69 chr2 97913423 97913726 -155342857 - MLT1A1 LTR MaLR 0 365 92 2368 82 3 44 chr2 97913726 97914043 -155342540 - AluY SINE Alu -7 304 1 1864 169 3 69 chr2 97914043 97914130 -155342453 - MLT1A1 LTR MaLR -273 92 1 820 239 54 43 chr2 97914130 97914247 -155342336 + L1ME LINE L1 1438 1587 -5047 2827 173 61 25 chr2 97914248 97914619 -155341964 + L1MB8 LINE L1 5403 5808 -370 2404 134 45 26 chr2 97914619 97915043 -155341540 - MSTB1 LTR MaLR 0 432 1 2827 173 61 25 chr2 97915043 97915313 -155341270 + L1MB8 LINE L1 5808 6067 -111 2500 82 0 0 chr2 97915316 97915620 -155340963 + AluSc SINE Alu 1 304 -5 287 246 158 18 chr2 97915631 97915745 -155340838 + FLAM_A SINE Alu 1 130 -3 581 125 48 10 chr2 97915766 97915870 -155340713 + L1MB7 LINE L1 6066 6173 -11 1921 111 0 28 chr2 97915926 97916236 -155340347 + AluSx SINE Alu 1 302 0 367 211 53 0 chr2 97916350 97916426 -155340157 - MER82 DNA MER2_type -1 652 573 43215 36 1 1 chr2 97916443 97922593 -155333990 - L1PA3 LINE L1 0 6155 9 1083 193 5 46 chr2 97922598 97922770 -155333813 - MER82 DNA MER2_type -94 559 396 1964 149 0 14 chr2 97922770 97923066 -155333517 - AluJb SINE Alu -20 292 1 1083 193 5 46 chr2 97923066 97923111 -155333472 - MER82 DNA MER2_type -257 396 351 318 217 0 0 chr2 97923118 97923187 -155333396 + L1MB7 LINE L1 6107 6175 -9 487 109 0 0 chr2 97923242 97923306 -155333277 + AluS SINE Alu 2 65 -248 491 152 0 0 chr2 97923346 97923425 -155333158 - MER82 DNA MER2_type -376 277 199 1074 159 28 0 chr2 97923699 97923881 -155332702 - MER82 DNA MER2_type -449 204 18 807 260 36 26 chr2 97923892 97924190 -155332393 + L1M4c LINE L1 1367 1859 -884 2423 53 0 3 chr2 97924190 97924472 -155332111 + AluY SINE Alu 21 301 -10 807 260 36 26 chr2 97924472 97924491 -155332092 + L1M4c LINE L1 1859 1876 -867 1699 92 92 0 chr2 97924509 97924771 -155331812 - L1MA1 LINE L1 0 6302 6017 793 188 75 0 chr2 97925505 97925665 -155330918 - MSTC LTR MaLR 0 428 257 317 235 69 52 chr2 97925716 97925901 -155330682 + MLT1J LTR MaLR 230 448 -63 1888 138 100 26 chr2 97925910 97926250 -155330333 - MLT1A1 LTR MaLR 0 365 1 1720 191 10 10 chr2 97926350 97926649 -155329934 - AluJo SINE Alu -13 299 1 478 312 74 5 chr2 97927304 97927493 -155329090 + MIR SINE MIR 6 207 -55 2276 155 110 70 chr2 97928622 97929150 -155327433 - MER44D DNA MER2_type 0 605 2 22 0 0 0 chr2 97930478 97930500 -155326083 + AT_rich Low_complexity Low_complexity 1 22 0 2204 80 3 7 chr2 97932901 97933200 -155323383 - AluSg SINE Alu -12 298 1 901 176 16 37 chr2 97933898 97934086 -155322497 - AluJo SINE Alu -8 304 121 1261 117 66 0 chr2 97934454 97934674 -155321909 - AluSq SINE Alu 0 307 75 2270 102 0 0 chr2 97934674 97934978 -155321605 - AluSg SINE Alu -6 304 1 299 280 26 111 chr2 97936063 97936252 -155320331 + MER5A DNA MER1_type 16 188 -1 269 222 0 19 chr2 97937187 97937241 -155319342 - L3 LINE CR1 -2 1575 1523 1526 151 86 7 chr2 97937472 97937750 -155318833 + AluJo SINE Alu 1 300 -12 265 213 56 111 chr2 97937833 97937941 -155318642 - L3 LINE CR1 -226 1351 1250 291 306 74 9 chr2 97938140 97938248 -155318335 - L3 LINE CR1 -369 1208 1094 4682 116 7 43 chr2 97938282 97938937 -155317646 - Tigger1 DNA MER2_type -101 2317 1692 1853 149 0 7 chr2 97938937 97939226 -155317357 - AluSx SINE Alu -25 287 1 4682 116 7 43 chr2 97939226 97939331 -155317252 - Tigger1 DNA MER2_type -726 1692 1585 532 206 0 0 chr2 97939331 97939428 -155317155 - FRAM SINE Alu -7 169 73 875 217 6 6 chr2 97939531 97939706 -155316877 + FRAM SINE Alu 1 175 -1 594 75 0 0 chr2 97939744 97939824 -155316759 + (TA)n Simple_repeat Simple_repeat 2 81 0 2078 118 7 7 chr2 97940228 97940533 -155316050 + AluSq SINE Alu 5 309 -4 225 272 72 56 chr2 97940605 97940730 -155315853 - L3 LINE CR1 -764 813 687 1702 174 10 0 chr2 97941651 97941955 -155314628 + AluJo SINE Alu 1 307 -5 2458 47 0 0 chr2 97942806 97943102 -155313481 + AluY SINE Alu 1 296 -15 190 288 14 27 chr2 97943121 97943194 -155313389 - MIR3 SINE MIR -123 85 14 757 130 0 49 chr2 97943461 97943584 -155312999 - FLAM_C SINE Alu -25 118 2 238 271 93 28 chr2 97944804 97944911 -155311672 - MER5B DNA MER1_type 0 178 65 462 175 33 164 chr2 97944979 97945162 -155311421 + MIR SINE MIR 104 262 0 294 333 44 9 chr2 97945165 97945279 -155311304 - MIR3 SINE MIR -45 163 46 2321 69 23 0 chr2 97945640 97945944 -155310639 + AluY SINE Alu 1 311 0 213 217 181 36 chr2 97946686 97946769 -155309814 - MIR SINE MIR 0 262 168 745 140 0 100 chr2 97946951 97947101 -155309482 + FLAM_C SINE Alu 3 137 -6 2097 128 3 0 chr2 97949878 97950183 -155306400 - AluSx SINE Alu -2 310 5 1908 131 7 10 chr2 97951905 97952196 -155304387 + AluSx SINE Alu 15 304 -8 1849 109 35 11 chr2 97952625 97952909 -155303674 + AluSx SINE Alu 1 291 -21 2395 57 0 10 chr2 97953082 97953383 -155303200 + AluY SINE Alu 1 298 -13 637 303 48 41 chr2 97953755 97954069 -155302514 + L2 LINE L2 39 354 -2960 630 217 32 49 chr2 97954072 97954297 -155302286 + MER106B DNA MER1_type 2 233 -3 3168 248 124 59 chr2 97954310 97955700 -155300883 + L2 LINE L2 347 1827 -1487 355 256 50 16 chr2 97955708 97955829 -155300754 - L1MC4 LINE L1 -11 8031 7907 1102 212 251 2 chr2 97955882 97956325 -155300258 + LTR50 LTR ERVL 1 553 -242 572 271 225 9 chr2 97956343 97956561 -155300022 + L2 LINE L2 1962 2226 -1088 256 271 31 21 chr2 97956642 97956738 -155299845 + L1MC5 LINE L1 5629 5725 -2083 630 274 170 5 chr2 97956846 97957058 -155299525 + MIR SINE MIR 11 257 -5 1785 163 3 3 chr2 97957572 97957873 -155298710 + AluSx SINE Alu 1 301 -11 436 293 172 0 chr2 97959015 97959230 -155297353 - MIR SINE MIR -9 253 2 351 297 58 18 chr2 97960415 97960721 -155295862 + L1MC5 LINE L1 7261 7495 -543 494 194 11 0 chr2 97960791 97960884 -155295699 + AluJ/FLAM SINE Alu 2 95 -217 2285 89 3 0 chr2 97960886 97961190 -155295393 + AluSq SINE Alu 3 307 -6 1524 244 159 12 chr2 97961202 97961383 -155295200 - L2 LINE L2 -989 2325 2172 1930 115 0 0 chr2 97961383 97961661 -155294922 + AluSx SINE Alu 33 310 -2 1524 244 159 12 chr2 97961661 97961958 -155294625 - L2 LINE L2 -1142 2172 1777 1788 79 4 0 chr2 97961959 97962200 -155294383 - AluY SINE Alu -6 305 64 915 153 6 24 chr2 97962328 97962498 -155294085 + AluSg/x SINE Alu 134 300 -10 707 132 113 57 chr2 97962539 97962698 -155293885 + AluSg/x SINE Alu 127 294 -16 706 234 166 63 chr2 97962698 97963113 -155293470 - HAL1 LINE L1 -41 2466 2009 241 135 0 0 chr2 97963235 97963272 -155293311 - Alu SINE Alu -11 297 261 276 30 0 0 chr2 97963274 97963307 -155293276 + (TC)n Simple_repeat Simple_repeat 2 34 0 251 91 0 0 chr2 97963318 97963351 -155293232 - Alu SINE Alu -15 286 254 240 128 0 0 chr2 97963377 97963416 -155293167 - Alu SINE Alu -9 157 119 300 27 0 0 chr2 97963420 97963457 -155293126 + (TG)n Simple_repeat Simple_repeat 2 38 0 951 122 7 0 chr2 97963457 97963604 -155292979 - AluSg/x SINE Alu -28 284 137 1546 150 26 7 chr2 97963637 97963959 -155292624 + AluSx SINE Alu 6 332 0 1453 70 47 51 chr2 97964041 97964121 -155292462 - AluSq SINE Alu -99 214 135 2473 55 0 3 chr2 97964121 97964430 -155292153 - AluY SINE Alu -3 308 1 1453 70 47 51 chr2 97964430 97964564 -155292019 - AluSq SINE Alu -178 135 1 687 229 191 13 chr2 97964567 97964882 -155291701 - HAL1 LINE L1 -1402 1105 735 619 265 114 24 chr2 97964874 97965172 -155291411 - HAL1 LINE L1 -2133 374 50 * 235 303 0 0 chr2 97965233 97965299 -155291284 - L1MA10 LINE L1 -13 6321 6256 2705 220 84 26 chr2 97965316 97965820 -155290763 - L1ME2 LINE L1 -48 6116 5550 2189 100 0 13 chr2 97965820 97966131 -155290452 - AluSx SINE Alu -5 307 1 2705 220 84 26 chr2 97966131 97966399 -155290184 - L1ME2 LINE L1 -614 5550 5299 2595 174 23 37 chr2 97966443 97966767 -155289816 - L1MB7 LINE L1 -62 6122 5806 1904 138 3 0 chr2 97966767 97967057 -155289526 - AluSx SINE Alu -15 297 7 2595 174 23 37 chr2 97967057 97967249 -155289334 - L1MB7 LINE L1 -378 5806 5613 2385 226 100 16 chr2 97967249 97967918 -155288665 - MER50 LTR ERV1 0 734 10 1811 182 43 27 chr2 97967918 97968331 -155288252 - L1MB7 LINE L1 -552 5622 5217 1844 124 25 7 chr2 97968331 97968640 -155287943 - AluSg SINE Alu 0 310 2 1811 182 43 27 chr2 97968640 97968735 -155287848 - L1MB7 LINE L1 -957 5217 5125 2253 112 0 0 chr2 97968735 97969039 -155287544 - AluSc SINE Alu -5 304 1 1811 182 43 27 chr2 97969039 97969197 -155287386 - L1MB7 LINE L1 -1049 5125 4957 410 266 70 70 chr2 97969325 97969427 -155287156 - L1MC/D LINE L1 -639 5603 5503 1953 151 3 0 chr2 97969427 97969731 -155286852 - AluSx SINE Alu -7 305 1 410 266 70 70 chr2 97969731 97969909 -155286674 - L1MC/D LINE L1 -739 5503 5344 1946 112 0 59 chr2 97969909 97970230 -155286353 - AluSx SINE Alu -10 302 1 410 266 70 70 chr2 97970230 97970310 -155286273 - L1MC/D LINE L1 -898 5344 5266 26 64 0 0 chr2 97970313 97970360 -155286223 + AT_rich Low_complexity Low_complexity 1 47 0 1865 112 59 3 chr2 97972765 97973052 -155283531 + AluJb SINE Alu 1 303 -9 340 268 268 40 chr2 97973093 97973492 -155283091 - L1MC4a LINE L1 -1869 5939 5450 643 265 59 20 chr2 97973678 97973882 -155282701 + L2 LINE L2 3102 3313 0 2276 97 0 6 chr2 97973920 97974231 -155282352 - AluSq SINE Alu -4 309 1 5592 105 59 32 chr2 97974333 97975140 -155281443 - L1PA15 LINE L1 0 6165 5302 1980 121 6 19 chr2 97975140 97975455 -155281128 - AluSx SINE Alu -1 311 1 5592 105 59 32 chr2 97975455 97975743 -155280840 - L1PA15 LINE L1 -863 5302 5023 187 261 273 0 chr2 97975860 97975948 -155280635 - L2 LINE L2 -563 2751 2640 585 197 68 14 chr2 97975964 97976111 -155280472 - MER90 LTR ERV1 -2 612 458 231 179 54 18 chr2 97976134 97976190 -155280393 - MLT1F1 LTR MaLR -496 71 14 229 257 128 35 chr2 97976312 97976538 -155280045 - LTR33 LTR ERVL -272 249 3 353 263 0 0 chr2 97976541 97976617 -155279966 + L2 LINE L2 3238 3313 0 288 182 91 0 chr2 97978331 97978397 -155278186 + MIR3 SINE MIR 101 172 -36 204 336 44 0 chr2 97978499 97978636 -155277947 - L2 LINE L2 -178 3094 2952 2151 103 0 10 chr2 97979670 97979970 -155276613 - AluY SINE Alu -14 297 1 227 315 19 9 chr2 97981070 97981178 -155275405 + GA-rich Low_complexity Low_complexity 2 110 0 185 62 83 0 chr2 97981816 97981864 -155274719 + (TG)n Simple_repeat Simple_repeat 1 52 0 226 279 0 25 chr2 97982359 97982438 -155274145 + (TG)n Simple_repeat Simple_repeat 1 77 0 500 300 151 23 chr2 97983193 97983543 -155273040 + L2 LINE L2 2919 3313 0 1958 161 7 0 chr2 97983654 97983964 -155272619 - AluSx SINE Alu 0 312 1 427 352 28 0 chr2 97984454 97984633 -155271950 + MIR SINE MIR 78 261 -1 367 307 60 25 chr2 97984709 97984910 -155271673 + MIR SINE MIR 13 222 -40 2301 79 3 3 chr2 97985737 97986040 -155270543 - AluSq SINE Alu -10 303 1 424 256 100 17 chr2 97986043 97986223 -155270360 + MER113 DNA MER1_type? 33 227 -294 364 267 79 0 chr2 97986227 97986328 -155270255 + L2 LINE L2 3198 3306 -7 425 231 66 8 chr2 97986369 97986490 -155270093 + MER113 DNA MER1_type? 295 422 -99 207 0 0 0 chr2 97986737 97986760 -155269823 + (CA)n Simple_repeat Simple_repeat 1 23 0 811 183 0 0 chr2 97988012 97988143 -155268440 + FLAM_A SINE Alu 8 138 -4 279 0 0 0 chr2 97990342 97990373 -155266210 + (A)n Simple_repeat Simple_repeat 1 31 0 182 235 99 0 chr2 97990454 97990535 -155266048 - L2 LINE L2 -1611 1703 1615 2478 66 0 0 chr2 97990627 97990930 -155265653 - AluSx SINE Alu -9 303 1 23 0 0 0 chr2 97990940 97990963 -155265620 + AT_rich Low_complexity Low_complexity 1 23 0 1713 118 57 4 chr2 97991302 97991590 -155264993 + AluSx SINE Alu 5 306 0 4370 113 40 53 chr2 97992397 97992561 -155264022 - LTR8 LTR ERV1 0 691 526 1960 123 0 23 chr2 97992561 97992861 -155263722 - AluSx SINE Alu -13 299 7 4370 113 40 53 chr2 97992861 97992880 -155263703 - LTR8 LTR ERV1 -165 526 508 2038 124 13 0 chr2 97992880 97993178 -155263405 - AluSx SINE Alu -10 302 1 4370 113 40 53 chr2 97993178 97993693 -155262890 - LTR8 LTR ERV1 -183 508 1 5441 121 19 15 chr2 97993693 97994277 -155262306 - HUERS-P1 LTR ERV1 0 6263 5674 2004 135 0 3 chr2 97994277 97994573 -155262010 - AluSg SINE Alu -15 295 1 5441 121 19 15 chr2 97994573 97994850 -155261733 - HUERS-P1 LTR ERV1 -589 5674 5399 2402 60 0 10 chr2 97994876 97995178 -155261405 - AluY SINE Alu -12 299 1 4368 120 98 34 chr2 97995241 97996016 -155260567 - HUERS-P1 LTR ERV1 -5438 825 1 2616 135 30 17 chr2 97996016 97996475 -155260108 - LTR8 LTR ERV1 0 691 227 1164 146 19 0 chr2 97996638 97996850 -155259733 - L1M4 LINE L1 -371 5813 5598 1107 125 19 0 chr2 97996850 97997010 -155259573 - AluSg/x SINE Alu -16 294 132 2045 126 7 0 chr2 97997010 97997319 -155259264 - AluSq SINE Alu -2 311 1 525 79 13 0 chr2 97997319 97997395 -155259188 - L1M4 LINE L1 -747 5399 5323 1840 133 13 13 chr2 97997405 97997705 -155258878 + AluJb SINE Alu 11 310 -2 1759 172 3 3 chr2 97997979 97998276 -155258307 - AluJo SINE Alu -15 297 1 342 272 0 0 chr2 97998344 97998425 -155258158 + MIR3 SINE MIR 116 196 -12 495 240 48 91 chr2 97998693 97998793 -155257790 - MIR SINE MIR -10 252 164 2145 101 3 7 chr2 97998793 97999089 -155257494 - AluSx SINE Alu -17 295 1 495 240 48 91 chr2 97999089 97999196 -155257387 - MIR SINE MIR -98 164 54 425 295 62 31 chr2 97999249 97999473 -155257110 - MER102a DNA MER1_type -8 322 92 2273 87 3 0 chr2 98002035 98002335 -155254248 - AluSx SINE Alu -11 301 1 2685 179 62 14 chr2 98002789 98003488 -155253095 + MER21B LTR ERV1 1 842 -21 610 259 107 22 chr2 98003632 98003856 -155252727 - MIR SINE MIR -11 251 9 2241 57 3 14 chr2 98005167 98005464 -155251119 - AluY SINE Alu -17 294 1 21 0 0 0 chr2 98005466 98005487 -155251096 + AT_rich Low_complexity Low_complexity 1 21 0 275 267 204 28 chr2 98005828 98006004 -155250579 + MIR3 SINE MIR 1 207 -1 1569 180 54 0 chr2 98009801 98010079 -155246504 - AluJb SINE Alu -19 293 1 2028 104 4 0 chr2 98010700 98011013 -155245570 - AluSg SINE Alu 0 314 1 262 51 0 26 chr2 98011056 98011095 -155245488 - U2 snRNA snRNA -150 38 1 667 217 23 0 chr2 98011364 98011493 -155245090 + MER58B DNA MER1_type 181 312 -29 2034 105 3 14 chr2 98011493 98011789 -155244794 - AluSq SINE Alu -20 293 1 358 269 194 8 chr2 98011898 98012032 -155244551 + MER5A DNA MER1_type 31 189 0 682 275 31 38 chr2 98013038 98013329 -155243254 + L1M4 LINE L1 3243 3531 -2615 359 330 62 58 chr2 98019962 98020220 -155236363 - MIR SINE MIR -3 259 1 2438 72 0 0 chr2 98020891 98021197 -155235386 + AluSq SINE Alu 1 306 -7 345 274 26 44 chr2 98022850 98022963 -155233620 - MIR SINE MIR -38 224 114 2417 118 102 8 chr2 98023055 98023446 -155233137 - MSTA LTR MaLR 0 428 1 2167 109 0 7 chr2 98024473 98024777 -155231806 + AluSx SINE Alu 2 303 -9 1853 112 32 64 chr2 98024779 98025092 -155231491 + AluSq SINE Alu 3 305 -8 2262 89 0 0 chr2 98025093 98025385 -155231198 + AluSg SINE Alu 1 292 -18 1735 173 7 3 chr2 98025425 98025726 -155230857 - AluJb SINE Alu -10 302 1 896 205 0 0 chr2 98025876 98026042 -155230541 + AluJb SINE Alu 142 307 -5 2312 90 7 3 chr2 98029220 98029521 -155227062 + AluSg SINE Alu 1 302 -8 2541 47 0 13 chr2 98029921 98030221 -155226362 - AluY SINE Alu -15 296 1 1625 185 143 47 chr2 98031699 98031884 -155224699 - Charlie1 DNA MER1_type -1 2760 2594 824 168 0 0 chr2 98031884 98032015 -155224568 - FLAM_C SINE Alu -2 131 1 1625 185 143 47 chr2 98032015 98032255 -155224328 - Charlie1 DNA MER1_type -167 2594 2378 2487 75 0 3 chr2 98032255 98032560 -155224023 - AluSg SINE Alu -6 304 1 1625 185 143 47 chr2 98032560 98033116 -155223467 - Charlie1 DNA MER1_type -383 2378 1568 2400 86 3 0 chr2 98033116 98033407 -155223176 - AluSp SINE Alu -15 298 7 1625 185 143 47 chr2 98033407 98033519 -155223064 - Charlie1 DNA MER1_type -1193 1568 1468 321 176 27 54 chr2 98033517 98033591 -155222992 - Charlie1 DNA MER1_type -2688 73 2 * 523 210 176 34 chr2 98033746 98033922 -155222661 - MER106A DNA MER1_type 0 236 36 308 293 148 84 chr2 98035049 98035109 -155221474 - L1ME4a LINE L1 -216 5905 5850 2349 108 0 3 chr2 98035109 98035414 -155221169 - AluSx SINE Alu -8 304 1 2320 85 14 0 chr2 98035423 98035716 -155220867 - AluSg SINE Alu -13 297 1 308 293 148 84 chr2 98035716 98035908 -155220675 - L1ME4a LINE L1 -278 5843 5626 2494 76 7 0 chr2 98035997 98036299 -155220284 + AluY SINE Alu 2 305 -6 2251 115 10 0 chr2 98037564 98037869 -155218714 - AluSq SINE Alu -5 308 1 2419 81 7 3 chr2 98038780 98039088 -155217495 - AluSq SINE Alu -4 309 1 282 230 69 23 chr2 98042189 98042276 -155214307 - MIR SINE MIR -82 126 36 1442 78 0 31 chr2 98042391 98042584 -155213999 + AluSq SINE Alu 120 306 -7 2070 109 0 40 chr2 98042594 98042897 -155213686 + AluSx SINE Alu 13 303 -9 2110 119 27 0 chr2 98042962 98043256 -155213327 + AluSx SINE Alu 1 302 -10 2242 109 7 10 chr2 98043659 98043962 -155212621 - AluSx SINE Alu -10 302 1 218 325 81 8 chr2 98044087 98044210 -155212373 - MIR SINE MIR -39 223 92 1010 158 0 47 chr2 98044493 98044664 -155211919 + FRAM SINE Alu 1 163 -13 340 292 71 9 chr2 98046150 98046263 -155210320 - MIR SINE MIR -96 166 47 219 259 103 35 chr2 98046575 98046691 -155209892 + MIR SINE MIR 12 135 -127 451 302 56 11 chr2 98047663 98047842 -155208741 + MER5A DNA MER1_type 1 187 -2 2185 120 7 3 chr2 98048017 98048308 -155208275 - AluSx SINE Alu -20 292 1 2511 74 3 0 chr2 98048449 98048758 -155207825 - AluSx SINE Alu 0 312 3 516 257 108 36 chr2 98048965 98049214 -155207369 - HAL1 LINE L1 -2229 278 12 1219 173 73 67 chr2 98049297 98049349 -155207234 - L1MB3 LINE L1 0 6183 6133 2340 93 7 0 chr2 98049349 98049649 -155206934 - AluSp SINE Alu -11 302 1 2438 91 0 0 chr2 98049653 98049949 -155206634 - AluSc SINE Alu -13 296 1 1558 168 27 8 chr2 98049953 98050209 -155206374 - AluJo SINE Alu -16 296 36 1219 173 73 67 chr2 98050209 98050476 -155206107 - L1MB3 LINE L1 -54 6129 5852 2319 103 0 16 chr2 98054393 98054704 -155201879 - AluSx SINE Alu -6 306 1 22 0 0 0 chr2 98055010 98055032 -155201551 + AT_rich Low_complexity Low_complexity 1 22 0 252 315 150 52 chr2 98055403 98055689 -155200894 - L2 LINE L2 -44 3228 2915 624 162 27 0 chr2 98056347 98056458 -155200125 - FLAM_C SINE Alu -24 119 6 2317 75 11 0 chr2 98056544 98056822 -155199761 + AluSc SINE Alu 1 281 -28 338 0 24 0 chr2 98056822 98056864 -155199719 + (CA)n Simple_repeat Simple_repeat 2 44 0 2315 119 0 0 chr2 98057426 98057728 -155198855 - AluSx SINE Alu -10 302 1 262 111 0 37 chr2 98057811 98057865 -155198718 + (TTTC)n Simple_repeat Simple_repeat 1 52 0 1286 163 41 9 chr2 98057879 98058100 -155198483 - AluJb SINE Alu -1 311 84 2079 101 3 74 chr2 98058181 98058507 -155198076 - AluSx SINE Alu -9 303 1 538 238 267 26 chr2 98058882 98059185 -155197398 - MLT1K LTR MaLR -7 581 206 1366 233 87 34 chr2 98059865 98060359 -155196224 - MLT2B1 LTR ERVL 0 520 1 2477 100 0 0 chr2 98060452 98060761 -155195822 + AluSx SINE Alu 3 311 -1 299 287 70 0 chr2 98060889 98061004 -155195579 + MIR3 SINE MIR 83 205 -3 822 175 0 7 chr2 98061076 98061213 -155195370 + FAM SINE Alu 20 155 -30 2237 123 13 0 chr2 98061213 98061521 -155195062 - AluSp SINE Alu -1 312 1 1308 107 0 5 chr2 98061544 98061740 -155194843 - L1PB1 LINE L1 0 6151 5957 1619 155 0 4 chr2 98061770 98062028 -155194555 + AluSx SINE Alu 52 308 -4 2218 127 3 0 chr2 98062052 98062359 -155194224 + AluSx SINE Alu 1 308 -4 1270 181 8 51 chr2 98062505 98062759 -155193824 - AluJo SINE Alu -45 267 25 266 144 52 134 chr2 98062772 98062823 -155193760 - L1M4 LINE L1 -814 5332 5291 1618 149 76 0 chr2 98062823 98063098 -155193485 - AluSx SINE Alu -16 296 1 266 144 52 134 chr2 98063098 98063143 -155193440 - L1M4 LINE L1 -855 5291 5244 419 275 146 41 chr2 98063360 98063843 -155192740 - MLT1K LTR MaLR 0 588 11 1958 148 0 14 chr2 98064041 98064332 -155192251 + AluJo SINE Alu 1 287 -25 1046 241 71 60 chr2 98066234 98066654 -155189929 - LTR16A LTR ERVL 0 450 26 1750 180 34 3 chr2 98066833 98067127 -155189456 - AluJb SINE Alu -7 305 3 2220 110 3 16 chr2 98067138 98067446 -155189137 - AluSx SINE Alu -5 307 4 4225 339 56 42 chr2 98067701 98070292 -155186291 - ERVL LTR ERVL -823 4941 2310 2183 121 3 7 chr2 98070292 98070589 -155185994 - AluSx SINE Alu -16 296 1 4225 339 56 42 chr2 98070589 98070609 -155185974 - ERVL LTR ERVL -3454 2310 2292 428 164 114 43 chr2 98070678 98070764 -155185819 - L2 LINE L2 -1797 1517 1416 1887 144 23 33 chr2 98070764 98071069 -155185514 - AluJb SINE Alu -10 302 1 428 164 114 43 chr2 98071069 98071122 -155185461 - L2 LINE L2 -1898 1416 1368 392 292 103 11 chr2 98071470 98071655 -155184928 - LTR16B LTR ERVL -7 457 256 633 192 32 0 chr2 98071655 98071780 -155184803 - FLAM_A SINE Alu -4 129 1 1328 145 90 33 chr2 98072024 98072088 -155184495 - MLT1D LTR MaLR 0 626 567 2389 97 0 3 chr2 98072088 98072396 -155184187 + AluY SINE Alu 1 307 -4 1328 145 90 33 chr2 98072396 98072752 -155183831 - MLT1D LTR MaLR -59 567 1 495 263 34 69 chr2 98072800 98072975 -155183608 - L2 LINE L2 -1759 1555 1387 2188 103 4 0 chr2 98072986 98073267 -155183316 + AluSx SINE Alu 14 295 -17 241 179 60 0 chr2 98073270 98073337 -155183246 - L2 LINE L2 -2390 924 854 615 184 103 0 chr2 98073343 98073479 -155183104 + FAM SINE Alu 18 167 -18 2567 68 3 0 chr2 98073481 98073790 -155182793 + AluY SINE Alu 1 310 -1 617 275 181 54 chr2 98074086 98074588 -155181995 + L2 LINE L2 1795 2360 -954 235 259 116 9 chr2 98074639 98074751 -155181832 + L2 LINE L2 2863 2986 -327 21 0 0 0 chr2 98075168 98075189 -155181394 + GC_rich Low_complexity Low_complexity 1 21 0 2585 68 0 0 chr2 98075667 98075975 -155180608 - AluSq SINE Alu -5 308 1 2524 83 3 0 chr2 98076616 98076917 -155179666 - AluSq SINE Alu -11 302 1 476 327 93 37 chr2 98077386 98077817 -155178766 + L2 LINE L2 2818 3272 0 260 127 73 55 chr2 98077842 98077897 -155178686 + MIR SINE MIR 91 146 -116 2413 82 0 31 chr2 98078331 98078650 -155177933 + AluY SINE Alu 1 309 -2 2354 114 3 3 chr2 98079045 98079353 -155177230 - AluSp SINE Alu -4 309 2 840 239 35 15 chr2 98079564 98079761 -155176822 + MIR SINE MIR 59 259 -3 2379 99 3 6 chr2 98080020 98080332 -155176251 - AluSx SINE Alu -1 311 1 1991 153 26 13 chr2 98080920 98081228 -155175355 - AluJb SINE Alu 0 312 1 405 0 0 0 chr2 98082003 98082048 -155174535 + (TA)n Simple_repeat Simple_repeat 1 45 0 2089 118 3 7 chr2 98082049 98082345 -155174238 - AluSx SINE Alu -17 295 1 2117 131 7 7 chr2 98086647 98086952 -155169631 - AluSx SINE Alu -7 305 1 4869 112 23 33 chr2 98087273 98087475 -155169108 - L1MA5A LINE L1 -3 6294 6092 1804 126 52 4 chr2 98087475 98087745 -155168838 - AluSx SINE Alu -29 283 1 4869 112 23 33 chr2 98087745 98088353 -155168230 - L1MA5A LINE L1 -205 6092 5492 1305 76 0 76 chr2 98088413 98088598 -155167985 + AluSx SINE Alu 1 171 -141 1712 88 0 54 chr2 98088598 98088837 -155167746 + AluSg/x SINE Alu 84 309 -3 382 293 139 5 chr2 98089913 98090115 -155166468 + MIR SINE MIR 4 230 -32 2423 106 3 0 chr2 98090845 98091157 -155165426 + AluSq SINE Alu 1 313 0 885 136 23 0 chr2 98091172 98091304 -155165279 + BC200 scRNA scRNA 3 137 -63 1610 206 7 0 chr2 98091493 98091790 -155164793 - AluJb SINE Alu 0 303 5 1105 245 97 21 chr2 98091865 98092286 -155164297 + HAL1 LINE L1 1056 1508 -999 472 184 0 31 chr2 98092291 98092389 -155164194 - AluSx SINE Alu -1 309 215 1333 94 0 0 chr2 98092389 98092559 -155164024 - AluSx SINE Alu -142 170 1 2031 123 7 0 chr2 98092608 98092893 -155163690 + AluSq SINE Alu 24 310 -3 629 189 0 0 chr2 98092901 98093023 -155163560 + HAL1 LINE L1 1540 1661 -846 2255 110 0 3 chr2 98093032 98093324 -155163259 + AluSq SINE Alu 1 291 -22 1575 113 5 9 chr2 98093629 98093850 -155162733 - AluSg/x SINE Alu -11 301 82 251 286 229 9 chr2 98094173 98094278 -155162305 - MIR SINE MIR -37 225 98 1663 145 7 68 chr2 98094309 98094619 -155161964 + AluJo SINE Alu 11 301 -11 462 210 180 14 chr2 98095241 98095565 -155161018 - HERVL40 LTR ERVL -4140 1390 913 1837 224 58 16 chr2 98095595 98096041 -155160542 - LTR40c LTR ERVL 0 465 1 2233 107 7 23 chr2 98096224 98096533 -155160050 + AluSx SINE Alu 1 304 -8 745 245 112 53 chr2 98096580 98096843 -155159740 - Tigger8 DNA MER2_type -112 554 261 1605 179 54 14 chr2 98096843 98096960 -155159623 + AluJo SINE Alu 1 112 -200 191 32 65 0 chr2 98096960 98096991 -155159592 + (CAAA)n Simple_repeat Simple_repeat 4 36 0 1605 179 54 14 chr2 98096991 98097152 -155159431 + AluJo SINE Alu 112 290 -22 745 245 112 53 chr2 98097152 98097264 -155159319 - Tigger8 DNA MER2_type -405 261 157 877 150 0 36 chr2 98097542 98097682 -155158901 - FLAM_C SINE Alu -8 135 1 508 139 14 0 chr2 98097710 98097782 -155158801 + AluS SINE Alu 2 74 -239 483 301 81 12 chr2 98097817 98098063 -155158520 - MARNA DNA Mariner -198 388 126 508 250 157 0 chr2 98098108 98098248 -155158335 - MIR SINE MIR -87 175 14 634 70 0 0 chr2 98098352 98098438 -155158145 - MER83 LTR ERV1 -362 86 1 420 250 122 41 chr2 98098516 98098688 -155157895 + MIR SINE MIR 60 245 -17 868 152 0 14 chr2 98099118 98099263 -155157320 - FAM SINE Alu -1 48 1 1891 152 3 7 chr2 98099664 98099954 -155156629 + AluJo SINE Alu 1 289 -23 1135 223 17 103 chr2 98099957 98100000 -155156583 - L1MB7 LINE L1 -2 6182 6137 2205 123 0 7 chr2 98100000 98100308 -155156275 - AluSc SINE Alu -3 306 1 1135 223 17 103 chr2 98100308 98100340 -155156243 - L1MB7 LINE L1 -47 6137 6104 1745 173 7 11 chr2 98100340 98100655 -155155928 + AluJo SINE Alu 1 314 0 1135 223 17 103 chr2 98100655 98100917 -155155666 - L1MB7 LINE L1 -80 6104 5821 1816 156 7 20 chr2 98100917 98101218 -155155365 - AluJo SINE Alu -15 297 1 1135 223 17 103 chr2 98101218 98101233 -155155350 - L1MB7 LINE L1 -363 5821 5872 2035 114 7 37 chr2 98101233 98101413 -155155170 - AluSx SINE Alu -24 288 119 2381 90 7 0 chr2 98101413 98101713 -155154870 + AluSx SINE Alu 1 302 -10 2035 114 7 37 chr2 98101713 98101829 -155154754 - AluSx SINE Alu -193 119 1 1135 223 17 103 chr2 98101829 98101881 -155154702 - L1MB7 LINE L1 -311 5873 5818 227 205 154 13 chr2 98102030 98102108 -155154475 - LTR16B LTR ERVL -371 93 5 278 261 24 97 chr2 98102355 98102520 -155154063 - MIR SINE MIR 0 262 110 2367 89 10 0 chr2 98102554 98102857 -155153726 + AluSp SINE Alu 1 306 -7 2319 246 70 9 chr2 98102871 98103633 -155152950 + ERVL LTR ERVL 2279 3123 -2641 1891 195 11 3 chr2 98103645 98103999 -155152584 + MER47B DNA MER2_type 3 359 -59 1772 167 0 23 chr2 98103999 98104304 -155152279 - AluJo SINE Alu -13 299 2 2005 152 12 0 chr2 98104306 98104636 -155151947 - MER54A LTR ERVL -7 894 561 1749 168 10 10 chr2 98104639 98104931 -155151652 + AluJo SINE Alu 4 295 -17 2192 135 0 0 chr2 98104934 98105245 -155151338 + AluSx SINE Alu 2 312 0 3212 163 14 9 chr2 98105297 98105862 -155150721 - MER54A LTR ERVL -333 568 1 1375 203 110 119 chr2 98105862 98106262 -155150321 + ERVL LTR ERVL 3303 3698 -2066 1528 180 60 7 chr2 98106262 98106383 -155150200 + AluJb SINE Alu 1 114 -198 279 0 0 0 chr2 98106383 98106414 -155150169 + (TAA)n Simple_repeat Simple_repeat 2 32 0 1528 180 60 7 chr2 98106414 98106576 -155150007 + AluJb SINE Alu 114 299 -13 1375 203 110 119 chr2 98106576 98106738 -155149845 + ERVL LTR ERVL 3698 3860 -1904 614 228 0 0 chr2 98106772 98106899 -155149684 + L1ME1 LINE L1 4039 4165 -1981 2251 123 21 101 chr2 98106905 98107301 -155149282 + MSTC LTR MaLR 1 356 -72 549 163 0 0 chr2 98107301 98107387 -155149196 - L1PB4 LINE L1 -12 6144 6059 2251 123 21 101 chr2 98107387 98107455 -155149128 + MSTC LTR MaLR 356 428 0 3566 193 89 74 chr2 98107455 98107576 -155149007 + L1ME1 LINE L1 4172 4290 -1876 2189 126 0 0 chr2 98107576 98107915 -155148668 + AluSx SINE Alu 1 312 0 3566 193 89 74 chr2 98107915 98107956 -155148627 + L1ME1 LINE L1 4290 4329 -1837 1993 104 36 7 chr2 98107956 98108261 -155148322 + AluSp SINE Alu 1 313 0 3566 193 89 74 chr2 98108261 98109364 -155147219 + L1ME1 LINE L1 4329 5415 -751 2336 119 0 10 chr2 98109364 98109675 -155146908 + AluSx SINE Alu 1 308 -4 3566 193 89 74 chr2 98109675 98109709 -155146874 + L1ME1 LINE L1 5415 5447 -719 2406 80 0 13 chr2 98109709 98110010 -155146573 + AluSq SINE Alu 1 297 -16 3566 193 89 74 chr2 98110010 98110132 -155146451 + L1ME1 LINE L1 5447 5566 -600 466 52 0 0 chr2 98110132 98110190 -155146393 + Alu SINE Alu 236 293 -17 3566 193 89 74 chr2 98110190 98110600 -155145983 + L1ME1 LINE L1 5566 6082 -84 340 264 45 18 chr2 98110592 98110702 -155145881 + L1MEc LINE L1 202 314 -6082 * 811 269 104 11 chr2 98110732 98110992 -155145591 - MLT2E LTR ERVL -335 293 10 556 174 134 74 chr2 98111052 98111198 -155145385 + Charlie2 DNA MER1_type 2109 2245 -617 2255 120 0 0 chr2 98111198 98111497 -155145086 - AluY SINE Alu -10 301 3 556 174 134 74 chr2 98111497 98111536 -155145047 + Charlie2 DNA MER1_type 2245 2280 -582 2408 88 0 7 chr2 98111536 98111842 -155144741 - AluSg SINE Alu -6 304 1 556 174 134 74 chr2 98111842 98112000 -155144583 + Charlie2 DNA MER1_type 2280 2427 -435 1615 128 31 0 chr2 98112000 98112226 -155144357 + AluSx SINE Alu 5 237 -75 2317 100 7 3 chr2 98112231 98112532 -155144051 + AluSp SINE Alu 1 302 -11 556 174 134 74 chr2 98112532 98112583 -155144000 + Charlie2 DNA MER1_type 2430 2535 -327 975 119 0 22 chr2 98112633 98112767 -155143816 + FLAM_C SINE Alu 1 131 -12 3506 91 43 8 chr2 98112768 98113275 -155143308 + LTR17 LTR ERV1 256 780 0 5515 65 1 17 chr2 98113275 98113995 -155142588 + HERV17 LTR ERV1 1 709 -7917 6247 55 16 37 chr2 98114180 98115071 -155141512 + HERV17 LTR ERV1 763 1634 -6992 * 9210 45 8 2 chr2 98115067 98116211 -155140372 + HERV17 LTR ERV1 2577 3727 -4899 12828 53 10 7 chr2 98116211 98116783 -155139800 + HERV17 LTR ERV1 4259 4828 -3798 2502 83 0 6 chr2 98116783 98117096 -155139487 + AluY SINE Alu 1 311 0 12828 53 10 7 chr2 98117096 98118162 -155138421 + HERV17 LTR ERV1 4828 5902 -2724 1228 54 0 30 chr2 98118153 98118321 -155138262 + HERV17 LTR ERV1 6985 7147 -1479 * 280 77 0 0 chr2 98118317 98118356 -155138227 + HERV17 LTR ERV1 7510 7548 -1078 * 2114 50 56 0 chr2 98118333 98118622 -155137961 + HERV17 LTR ERV1 6831 8626 0 2188 102 3 6 chr2 98118622 98118947 -155137636 + LTR17 LTR ERV1 1 324 -456 763 197 81 9 chr2 98118959 98119182 -155137401 + Charlie2 DNA MER1_type 2614 2852 -10 2149 129 3 3 chr2 98119195 98119497 -155137086 + AluJb SINE Alu 5 306 -6 1164 115 120 0 chr2 98119642 98119834 -155136749 + MER2 DNA MER2_type 2 216 -129 1547 77 64 17 chr2 98119848 98120082 -155136501 + MER1B DNA MER1_type 135 339 0 655 188 86 0 chr2 98120082 98120210 -155136373 + MER2 DNA MER2_type 207 345 0 2274 115 0 6 chr2 98120238 98120550 -155136033 + AluSg SINE Alu 1 310 0 767 112 24 24 chr2 98120734 98120903 -155135680 + GA-rich Low_complexity Low_complexity 3 171 0 960 101 7 30 chr2 98120914 98121212 -155135371 + (GAAA)n Simple_repeat Simple_repeat 1 291 0 1343 115 5 16 chr2 98121212 98121403 -155135180 + AluSg/x SINE Alu 104 292 -20 426 235 0 31 chr2 98121966 98122064 -155134519 - MIR SINE MIR -61 201 107 298 275 143 0 chr2 98122068 98122159 -155134424 + MIR SINE MIR 116 219 -43 647 300 99 35 chr2 98122329 98122752 -155133831 - LTR16B LTR ERVL -12 452 3 1356 234 129 9 chr2 98123136 98123486 -155133097 + MSTD LTR MaLR 1 392 -4 389 311 23 8 chr2 98123833 98123965 -155132618 + MIR SINE MIR 17 150 -58 1977 166 13 13 chr2 98125145 98125525 -155131058 - L1MB7 LINE L1 -8 6176 5797 815 215 38 6 chr2 98125526 98125737 -155130846 - L1MB7 LINE L1 -408 5736 5517 1938 151 3 28 chr2 98125964 98126283 -155130300 + AluJo SINE Alu 1 311 -1 307 302 0 24 chr2 98126283 98126409 -155130174 - L1MC/D LINE L1 -1984 5807 5685 2017 138 6 13 chr2 98126522 98126834 -155129749 - AluJo SINE Alu -1 311 2 477 289 29 49 chr2 98127025 98127229 -155129354 - L1MC/D LINE L1 -833 5296 5097 2326 99 0 0 chr2 98127243 98127536 -155129047 + AluSx SINE Alu 1 293 -19 335 196 0 0 chr2 98127537 98127593 -155128990 + L1MC4 LINE L1 6648 6703 -1339 5195 149 64 39 chr2 98127623 98129164 -155127419 - L1MA9 LINE L1 -8 6304 4712 1219 192 36 54 chr2 98129166 98129442 -155127141 + AluJo SINE Alu 4 274 -38 490 325 65 53 chr2 98129505 98129637 -155126946 - L1MC/D LINE L1 -766 1724 1595 2114 121 7 0 chr2 98129637 98129934 -155126649 + AluSq SINE Alu 1 299 -14 490 325 65 53 chr2 98129934 98130289 -155126294 - L1MC/D LINE L1 -895 1595 1341 1721 185 0 7 chr2 98130311 98130613 -155125970 + AluJb SINE Alu 1 300 -12 700 254 33 51 chr2 98130656 98130932 -155125651 - HAL1 LINE L1 -941 1566 1296 820 130 8 8 chr2 98130935 98131066 -155125517 - FLAM_C SINE Alu -12 131 1 596 299 139 47 chr2 98131066 98131497 -155125086 - L1MC/D LINE L1 -1218 1272 809 2214 93 7 0 chr2 98132129 98132420 -155124163 - AluSg SINE Alu -17 293 1 5830 228 46 59 chr2 98132737 98133170 -155123413 - L1M1 LINE L1 -4579 2065 1628 1981 137 0 0 chr2 98133170 98133455 -155123128 + AluSx SINE Alu 1 285 -27 5830 228 46 59 chr2 98133455 98135084 -155121499 - L1M1 LINE L1 -5016 1628 16 424 258 45 15 chr2 98135454 98135586 -155120997 - MIR SINE MIR -79 183 48 399 227 98 151 chr2 98137019 98137257 -155119326 + L1ME4a LINE L1 5822 6040 -81 1970 137 7 0 chr2 98137257 98137549 -155119034 - AluJb SINE Alu -14 298 5 399 227 98 151 chr2 98137549 98137627 -155118956 + L1ME4a LINE L1 6040 6121 0 302 288 18 61 chr2 98138214 98138346 -155118237 + MER5A DNA MER1_type 7 144 -45 827 137 0 0 chr2 98139681 98139827 -155116756 - FLAM_C SINE Alu 0 146 1 2505 45 0 10 chr2 98143066 98143375 -155113208 + AluY SINE Alu 1 306 -5 357 234 51 8 chr2 98143481 98143608 -155112975 - MIR SINE MIR -72 190 59 618 298 18 0 chr2 98144057 98144225 -155112358 - MER5B DNA MER1_type -7 171 1 195 379 21 11 chr2 98144478 98144573 -155112010 - MIR3 SINE MIR -19 189 94 204 327 0 0 chr2 98144590 98144645 -155111938 - MER5A DNA MER1_type -8 181 127 1577 185 17 0 chr2 98144688 98144975 -155111608 - AluJo SINE Alu -20 292 1 333 188 258 0 chr2 98145464 98145557 -155111026 + MER34 LTR ERV1 6 115 -427 1105 213 73 23 chr2 98145614 98145914 -155110669 + MER39 LTR ERV1 393 707 0 2031 90 4 4 chr2 98145924 98146230 -155110353 - AluSc SINE Alu 0 306 1 384 289 80 37 chr2 98146239 98146426 -155110157 - MIR SINE MIR -42 220 26 746 271 127 4 chr2 98147577 98147891 -155108692 + L1ME3A LINE L1 5772 6117 -47 192 234 0 0 chr2 98148647 98148694 -155107889 + (TG)n Simple_repeat Simple_repeat 1 47 0 394 370 78 25 chr2 98148694 98149013 -155107570 - L2 LINE L2 -9 3263 2928 1534 245 49 53 chr2 98149042 98149552 -155107031 - MLT1J LTR MaLR 0 511 4 204 333 48 20 chr2 98149908 98150055 -155106528 - L2 LINE L2 -952 2362 2212 390 341 84 0 chr2 98150142 98150309 -155106274 + MIR SINE MIR 13 193 -69 955 213 19 61 chr2 98150636 98150899 -155105684 - MLT1J LTR MaLR -250 261 10 2094 113 10 0 chr2 98151444 98151746 -155104837 - AluSx SINE Alu -7 305 1 195 245 57 0 chr2 98152226 98152279 -155104304 - MIR SINE MIR -69 139 84 1766 160 0 16 chr2 98152332 98152639 -155103944 + AluSx SINE Alu 1 302 -10 2040 117 16 3 chr2 98152639 98152947 -155103636 + AluSx SINE Alu 1 312 0 1693 134 10 38 chr2 98153347 98153639 -155102944 - THE1B LTR MaLR -8 356 73 1799 162 3 13 chr2 98153864 98154173 -155102410 - AluJo SINE Alu 0 312 7 1654 285 82 69 chr2 98154435 98155172 -155101411 + L1MEd LINE L1 89 815 -1761 2305 72 10 3 chr2 98155172 98155477 -155101106 + AluY SINE Alu 1 307 -4 1654 285 82 69 chr2 98155477 98156212 -155100371 + L1MEd LINE L1 815 1715 -861 1278 261 72 39 chr2 98156322 98156451 -155100132 - MLT1G LTR MaLR 0 590 467 2252 100 0 0 chr2 98156451 98156751 -155099832 - AluSq SINE Alu -13 300 1 1278 261 72 39 chr2 98156751 98157177 -155099406 - MLT1G LTR MaLR -123 467 1 1331 164 35 74 chr2 98157219 98157529 -155099054 + AluJo SINE Alu 1 298 -14 1548 179 7 18 chr2 98157699 98157984 -155098599 + AluJo SINE Alu 14 295 -17 833 293 64 20 chr2 98158019 98158154 -155098429 + L1MEd LINE L1 2030 2158 -4057 2118 120 3 0 chr2 98158154 98158453 -155098130 + AluSx SINE Alu 1 300 -12 833 293 64 20 chr2 98158453 98158500 -155098083 + L1MEd LINE L1 2158 2201 -4014 2081 124 0 16 chr2 98158500 98158806 -155097777 + AluSx SINE Alu 1 301 -11 833 293 64 20 chr2 98158806 98159244 -155097339 + L1MEd LINE L1 2201 2618 -3597 410 244 46 26 chr2 98159890 98160022 -155096561 - MLT1J LTR MaLR -308 203 102 1857 190 63 24 chr2 98160355 98160734 -155095849 + MSTD LTR MaLR 1 394 -2 485 259 146 27 chr2 98161244 98161429 -155095154 - MIR SINE MIR -36 226 20 1852 126 6 58 chr2 98161702 98162028 -155094555 + AluSx SINE Alu 1 309 -3 520 128 0 26 chr2 98162034 98162151 -155094432 + (GGAA)n Simple_repeat Simple_repeat 1 114 0 392 264 176 0 chr2 98162728 98162887 -155093696 - MIR SINE MIR -12 250 64 375 265 0 0 chr2 98163363 98163446 -155093137 + MIR SINE MIR 65 147 -61 1598 181 48 7 chr2 98164025 98164317 -155092266 + AluJo SINE Alu 1 304 -8 978 153 66 6 chr2 98165366 98165549 -155091034 - MER30 DNA MER1_type 0 230 37 192 152 0 0 chr2 98166726 98166759 -155089824 + A-rich Low_complexity Low_complexity 1 33 0 349 267 31 81 chr2 98166945 98167106 -155089477 - MIR SINE MIR -6 256 104 241 185 19 0 chr2 98167742 98167796 -155088787 + MIR SINE MIR 82 136 -72 395 361 32 0 chr2 98169363 98169518 -155087065 - MIR SINE MIR -74 188 29 847 143 13 19 chr2 98169818 98169972 -155086611 - FRAM SINE Alu -16 160 8 226 213 33 33 chr2 98170960 98171021 -155085562 + MIR SINE MIR 83 143 -119 201 246 123 53 chr2 98171247 98171361 -155085222 + MIR SINE MIR 84 205 -57 336 238 67 19 chr2 98171495 98171600 -155084983 + L2 LINE L2 3202 3311 -2 268 277 73 0 chr2 98171615 98171729 -155084854 - MIR SINE MIR -68 140 30 368 228 31 31 chr2 98172432 98172559 -155084024 + MIR3 SINE MIR 72 198 -10 188 302 48 0 chr2 98172613 98172676 -155083907 + L3 LINE CR1 1321 1386 -191 252 214 0 54 chr2 98173531 98173587 -155082996 + L3 LINE CR1 1407 1459 -118 411 273 98 0 chr2 98174098 98174230 -155082353 + MIR SINE MIR 44 188 -74 910 153 18 41 chr2 98174605 98174775 -155081808 - FRAM SINE Alu 0 166 1 208 193 0 53 chr2 98175130 98175187 -155081396 + (CGGGG)n Simple_repeat Simple_repeat 2 55 0 823 230 6 0 chr2 98175629 98175794 -155080789 + FRAM SINE Alu 1 166 -10 2136 80 0 4 chr2 98175799 98176075 -155080508 + AluSq SINE Alu 2 276 -37 198 103 0 0 chr2 98176077 98176106 -155080477 + (CA)n Simple_repeat Simple_repeat 2 30 0 2114 177 26 33 chr2 98176119 98176572 -155080011 + L1MB5 LINE L1 5382 5831 -343 420 337 6 18 chr2 98176919 98177085 -155079498 + CT-rich Low_complexity Low_complexity 1 164 0 218 195 0 0 chr2 98179330 98179382 -155077201 + MIR SINE MIR 72 124 -84 505 246 0 8 chr2 98180361 98180479 -155076104 + MIR SINE MIR 31 147 -115 676 324 118 60 chr2 98180909 98181135 -155075448 + L1M4 LINE L1 4377 4588 -1558 207 0 0 0 chr2 98181135 98181158 -155075425 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2063 94 18 0 chr2 98181160 98181437 -155075146 - AluSx SINE Alu -30 282 1 2149 62 0 0 chr2 98181437 98181696 -155074887 - AluSc SINE Alu -18 291 33 676 324 118 60 chr2 98181696 98182233 -155074350 + L1M4 LINE L1 4587 5179 -967 460 162 216 10 chr2 98182937 98183083 -155073500 + MER5B DNA MER1_type 3 189 0 253 192 58 0 chr2 98183090 98183142 -155073441 - MIR SINE MIR -84 124 70 185 346 115 0 chr2 98183314 98183392 -155073191 - MIR3 SINE MIR -25 183 97 182 180 20 40 chr2 98183631 98183681 -155072902 + MIR SINE MIR 95 143 -119 11135 127 31 71 chr2 98183711 98185838 -155070745 + Tigger1 DNA MER2_type 1 2035 -383 2319 92 0 0 chr2 98185838 98186132 -155070451 + AluSg SINE Alu 2 295 -15 11135 127 31 71 chr2 98186132 98186249 -155070334 + Tigger1 DNA MER2_type 2035 2155 -263 225 337 0 23 chr2 98186459 98186545 -155070038 + MIR3 SINE MIR 15 98 -110 797 149 7 43 chr2 98187306 98187447 -155069136 - AluSq/x SINE Alu -171 142 7 2127 107 7 13 chr2 98188433 98188733 -155067850 - AluSx SINE Alu -14 298 1 212 286 32 16 chr2 98189106 98189169 -155067414 - L2 LINE L2 -96 3217 3154 213 224 0 0 chr2 98189493 98189542 -155067041 + GA-rich Low_complexity Low_complexity 2 50 0 26 30 0 0 chr2 98190298 98190331 -155066252 + GC_rich Low_complexity Low_complexity 1 33 0 344 274 105 8 chr2 98191051 98191175 -155065408 + MER91A DNA MER1_type 61 196 0 195 308 111 0 chr2 98193027 98193144 -155063439 - MIR SINE MIR -116 146 17 187 333 51 0 chr2 98193365 98193443 -155063140 - MER5A DNA MER1_type -107 82 1 2103 109 7 0 chr2 98194174 98194468 -155062115 + AluSq SINE Alu 1 296 -17 2086 131 0 0 chr2 98195748 98196045 -155060538 + AluSq SINE Alu 1 297 -16 1017 190 0 22 chr2 98196075 98196254 -155060329 - FAM SINE Alu 0 175 1 371 143 48 0 chr2 98196255 98196339 -155060244 + Charlie8 DNA MER1_type 66 153 -2264 2350 72 16 0 chr2 98196344 98196650 -155059933 + AluSx SINE Alu 1 311 -1 253 274 108 10 chr2 98196880 98196982 -155059601 + MIR SINE MIR 80 191 -71 268 284 32 0 chr2 98197239 98197334 -155059249 + MER117 DNA MER1_type 100 197 0 2084 128 20 0 chr2 98197765 98198061 -155058522 + AluSx SINE Alu 1 302 -10 191 331 80 36 chr2 98198061 98198312 -155058271 + L2 LINE L2 2695 2956 -358 242 251 142 78 chr2 98198360 98198579 -155058004 + L2 LINE L2 2994 3226 -46 1447 194 104 38 chr2 98199326 98199670 -155056913 + MLT1C LTR MaLR 18 400 -67 1738 163 14 3 chr2 98199670 98199958 -155056625 - AluJb SINE Alu -9 303 13 1447 194 104 38 chr2 98199958 98200031 -155056552 + MLT1C LTR MaLR 400 467 0 368 302 145 11 chr2 98200131 98200310 -155056273 - MIR SINE MIR -10 252 50 2312 97 0 0 chr2 98200598 98200897 -155055686 + AluSx SINE Alu 1 299 -13 309 250 36 0 chr2 98201129 98201213 -155055370 + L1ME LINE L1 5585 5671 -450 315 186 56 34 chr2 98201306 98201400 -155055183 - L1MC4 LINE L1 -1322 7000 1974 275 291 0 13 chr2 98201697 98201776 -155054807 + MLT1L LTR MaLR 1 78 -537 1503 241 50 29 chr2 98201910 98202292 -155054291 + MLT1B LTR MaLR 1 390 0 577 288 40 89 chr2 98202410 98202736 -155053847 + MLT1D-int LTR MaLR 1028 1337 -34 2303 192 38 38 chr2 98202738 98203239 -155053344 + MLT1D LTR MaLR 5 505 0 807 142 33 40 chr2 98203276 98203452 -155053131 + MLT1F1 LTR MaLR 1 175 -380 708 242 0 11 chr2 98203647 98203825 -155052758 + MER8 DNA MER2_type 2 177 -62 380 178 0 0 chr2 98203858 98203931 -155052652 - Tigger2 DNA MER2_type -2645 73 1 28 48 0 0 chr2 98203933 98203975 -155052608 + AT_rich Low_complexity Low_complexity 1 42 0 189 0 0 0 chr2 98205104 98205125 -155051458 + (TG)n Simple_repeat Simple_repeat 1 21 0 333 294 24 24 chr2 98205711 98205837 -155050746 + LTR67 LTR ERVL 64 189 -368 2082 107 0 7 chr2 98206031 98206362 -155050221 - AluSc SINE Alu 0 329 1 1302 220 73 65 chr2 98206362 98206784 -155049799 + MER31-int LTR ERV1 2516 2933 -2003 2732 130 84 32 chr2 98206784 98207246 -155049337 + MER66B LTR ERV1 1 486 0 1302 220 73 65 chr2 98207246 98207269 -155049314 + MER31-int LTR ERV1 2933 2954 -1982 2170 121 0 0 chr2 98207269 98207566 -155049017 - AluSg SINE Alu -13 297 1 2068 86 58 0 chr2 98207566 98207844 -155048739 - AluSg SINE Alu -9 301 8 1302 220 73 65 chr2 98207844 98207946 -155048637 + MER31-int LTR ERV1 2953 3069 -1867 2470 195 63 65 chr2 98208178 98208459 -155048124 - MER92B LTR ERV1 -1 635 355 1821 178 0 0 chr2 98208459 98208763 -155047820 - AluJo SINE Alu -8 304 1 2470 195 63 65 chr2 98208763 98209117 -155047466 - MER92B LTR ERV1 -281 355 1 202 189 0 100 chr2 98209421 98209511 -155047072 + (CGGGG)n Simple_repeat Simple_repeat 4 84 0 23 33 0 0 chr2 98209572 98209602 -155046981 + GC_rich Low_complexity Low_complexity 1 30 0 2130 113 3 16 chr2 98212164 98212474 -155044109 - AluSx SINE Alu -6 306 1 187 333 51 0 chr2 98213957 98214035 -155042548 + MER5A DNA MER1_type 1 82 -107 195 308 111 0 chr2 98214259 98214376 -155042207 + MIR SINE MIR 17 146 -116 1614 125 8 4 chr2 98214952 98215192 -155041391 - AluSg SINE Alu -69 241 1 760 185 0 23 chr2 98215193 98215323 -155041260 - AluJo/FLAM SINE Alu -173 129 3 1807 146 0 17 chr2 98215570 98215864 -155040719 - AluJb SINE Alu -12 300 12 21 36 0 0 chr2 98216420 98216448 -155040135 + GC_rich Low_complexity Low_complexity 1 28 0 319 322 161 10 chr2 98216578 98216783 -155039800 + L1M4 LINE L1 3122 3357 -2789 1163 216 42 7 chr2 98217899 98218195 -155038388 + MLT1C LTR MaLR 18 328 -139 244 218 0 30 chr2 98218259 98218360 -155038223 - AluSc SINE Alu -2 297 200 252 244 122 0 chr2 98219018 98219108 -155037475 - MIR3 SINE MIR -26 182 82 312 271 33 86 chr2 98219746 98219897 -155036686 + MIR SINE MIR 104 246 -16 59 97 0 0 chr2 98220004 98220189 -155036394 + GC_rich Low_complexity Low_complexity 1 185 0 2312 61 7 7 chr2 98222770 98223065 -155033518 - AluY SINE Alu -16 295 1 789 309 68 24 chr2 98223065 98223521 -155033062 - L1MEd LINE L1 -5342 777 302 307 377 23 23 chr2 98223627 98223802 -155032781 - L1MEd LINE L1 -5942 177 3 1817 171 0 13 chr2 98224064 98224374 -155032209 + AluJo SINE Alu 7 312 0 572 287 18 40 chr2 98224602 98224874 -155031709 + THE1B LTR MaLR 73 338 -26 802 192 39 69 chr2 98225151 98225411 -155031172 - MLT1J LTR MaLR -250 261 10 1935 115 27 0 chr2 98225955 98226251 -155030332 - AluSx SINE Alu -8 304 1 199 245 57 0 chr2 98226729 98226782 -155029801 - MIR SINE MIR -124 138 83 1823 156 0 16 chr2 98226835 98227142 -155029441 + AluSx SINE Alu 1 302 -10 1968 124 3 10 chr2 98227142 98227441 -155029142 + AluSx SINE Alu 1 297 -15 712 94 8 17 chr2 98227441 98227558 -155029025 + Tigger1 DNA MER2_type 2040 2155 -263 225 337 0 23 chr2 98227767 98227853 -155028730 + MIR3 SINE MIR 15 98 -110 1902 217 65 65 chr2 98228861 98229306 -155027277 + MER31-int LTR ERV1 3171 3618 -1318 2113 148 125 10 chr2 98229306 98229690 -155026893 - MSTA LTR MaLR 0 428 1 1902 217 65 65 chr2 98229690 98229848 -155026735 + MER31-int LTR ERV1 3617 3774 -1162 1955 204 28 30 chr2 98229901 98230333 -155026250 + MER31-int LTR ERV1 3780 4210 -726 186 71 0 0 chr2 98230354 98230382 -155026201 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1865 102 0 53 chr2 98230386 98230671 -155025912 - AluSx SINE Alu -37 275 6 556 221 246 15 chr2 98230718 98230917 -155025666 + LTR37A LTR ERV1 1 245 -181 297 336 0 0 chr2 98230961 98231065 -155025518 + MER31-int LTR ERV1 4364 4467 -469 608 243 30 30 chr2 98231698 98231867 -155024716 + MER92C LTR ERV1 1 169 -385 197 241 45 80 chr2 98232054 98232166 -155024417 - L2 LINE L2 -1606 1708 1601 239 144 39 67 chr2 98233552 98233656 -155022927 + (TA)n Simple_repeat Simple_repeat 1 101 0 2120 141 43 0 chr2 98233721 98234047 -155022536 - MER2 DNA MER2_type -5 340 1 674 215 105 10 chr2 98234075 98234275 -155022308 + LTR50 LTR ERVL 21 239 -556 487 283 21 21 chr2 98234287 98234432 -155022151 + HERVL LTR ERVL 2034 2178 -3476 1225 273 40 0 chr2 98234463 98234789 -155021794 + HERVL LTR ERVL 2305 2643 -3121 2702 293 102 21 chr2 98234864 98236036 -155020547 + HERVL LTR ERVL 2732 3998 -1656 1050 300 55 18 chr2 98236060 98236608 -155019975 + HERVL LTR ERVL 4552 5135 -629 551 211 56 21 chr2 98237464 98237606 -155018977 + MIR SINE MIR 15 161 -101 1358 167 49 39 chr2 98238097 98238403 -155018180 - AluJo SINE Alu -3 309 1 2138 85 0 7 chr2 98238418 98238711 -155017872 - AluY SINE Alu -20 291 1 303 250 125 59 chr2 98238770 98238906 -155017677 - MLT1L LTR MaLR -275 340 196 368 169 161 100 chr2 98239459 98239589 -155016994 + LTR33 LTR ERVL 11 148 -373 264 229 186 8 chr2 98239851 98239969 -155016614 + LTR33 LTR ERVL 383 521 0 1061 245 213 15 chr2 98240203 98240673 -155015910 + L1ME3A LINE L1 5603 6165 -5 184 291 97 19 chr2 98240935 98241038 -155015545 + MIR SINE MIR 42 152 -56 2250 88 0 0 chr2 98241099 98241394 -155015189 + AluSg SINE Alu 1 295 -15 239 227 11 57 chr2 98241742 98241830 -155014753 - L1MC5 LINE L1 -36 7925 7842 2088 269 90 37 chr2 98241830 98242065 -155014518 - L1ME LINE L1 -4893 1187 966 1933 120 7 26 chr2 98242065 98242373 -155014210 + AluSx SINE Alu 1 302 -10 2088 269 90 37 chr2 98242373 98243273 -155013310 - L1ME LINE L1 -5114 966 8 2142 247 121 22 chr2 98243304 98244111 -155012472 - L1ME3A LINE L1 -83 6087 5200 746 203 70 0 chr2 98244112 98244270 -155012313 - FRAM SINE Alu -7 169 1 1370 150 24 4 chr2 98244279 98244525 -155012058 - L1MA5 LINE L1 -2 6298 6048 1635 148 58 10 chr2 98244526 98244842 -155011741 - L1MA5 LINE L1 -216 5965 5636 5474 125 40 12 chr2 98245024 98245900 -155010683 + L1PB2 LINE L1 5072 5980 -171 2193 94 7 0 chr2 98245900 98246198 -155010385 + AluSx SINE Alu 1 300 -12 5474 125 40 12 chr2 98246198 98246372 -155010211 + L1PB2 LINE L1 5980 6148 -3 572 171 48 0 chr2 98246589 98246694 -155009889 - FAM SINE Alu -24 161 52 338 286 105 85 chr2 98246708 98247002 -155009581 - L1MEd LINE L1 -5023 1096 797 5398 230 112 16 chr2 98247075 98248542 -155008041 + L1ME4a LINE L1 495 1820 -4720 2228 98 0 10 chr2 98248542 98248848 -155007735 - AluSx SINE Alu -9 303 1 5398 230 112 16 chr2 98248848 98249771 -155006812 + L1ME4a LINE L1 1820 3168 -3372 881 140 11 91 chr2 98249751 98249820 -155006763 + L1MD2 LINE L1 5422 5495 -747 * 2011 105 13 35 chr2 98249820 98250135 -155006448 + AluSx SINE Alu 1 308 -4 881 140 11 91 chr2 98250135 98250251 -155006332 + L1MD2 LINE L1 5495 5592 -650 508 123 0 14 chr2 98250354 98250427 -155006156 - AluJ/FLAM SINE Alu -230 82 11 2091 183 75 73 chr2 98250436 98250550 -155006033 + L1MD2 LINE L1 5581 5693 -549 2105 98 0 7 chr2 98250550 98250876 -155005707 + AluSx SINE Alu 1 324 0 2091 183 75 73 chr2 98250876 98251378 -155005205 + L1MD2 LINE L1 5693 6162 -80 382 273 154 21 chr2 98252445 98252569 -155004014 + MIR SINE MIR 7 154 -108 2106 117 0 3 chr2 98252569 98252868 -155003715 + AluSg SINE Alu 1 298 -12 382 273 154 21 chr2 98252868 98252886 -155003697 + MIR SINE MIR 154 168 -94 479 253 199 18 chr2 98255515 98255681 -155000902 + MIR SINE MIR 13 208 -54 1235 174 29 12 chr2 98255998 98256240 -155000343 + AluJo SINE Alu 1 246 -66 684 150 8 17 chr2 98256262 98256382 -155000201 + FLAM_C SINE Alu 16 134 -9 523 204 14 20 chr2 98256818 98256965 -154999618 - L1MC5 LINE L1 -212 7749 7604 361 221 180 33 chr2 98257071 98257193 -154999390 - MIR3 SINE MIR -51 157 18 2146 120 0 3 chr2 98257312 98257621 -154998962 - AluSc SINE Alu -1 308 1 305 259 38 122 chr2 98257887 98258150 -154998433 + L1ME4a LINE L1 3915 4155 -2385 2156 107 7 3 chr2 98258347 98258655 -154997928 + AluSx SINE Alu 1 309 -3 323 299 86 91 chr2 98258921 98259013 -154997570 + L1ME4a LINE L1 5341 5432 -1108 951 136 0 7 chr2 98259013 98259167 -154997416 + L1MB3 LINE L1 6028 6180 -3 323 299 86 91 chr2 98259167 98259675 -154996908 + L1ME4a LINE L1 5432 5716 -824 526 304 98 18 chr2 98259683 98260123 -154996460 + L1ME4a LINE L1 6039 6513 -2 469 137 10 108 chr2 98260621 98260723 -154995860 + AluJo/FLAM SINE Alu 39 130 -182 1803 132 66 0 chr2 98260724 98261013 -154995570 + AluSx SINE Alu 1 308 -4 884 203 68 0 chr2 98262143 98262320 -154994263 - MIR SINE MIR -8 254 66 2140 102 3 3 chr2 98262994 98263298 -154993285 - AluY SINE Alu -7 304 1 235 37 0 0 chr2 98263306 98263357 -154993226 - AluY SINE Alu 0 307 257 2018 109 10 0 chr2 98263677 98263970 -154992613 - AluSq SINE Alu -17 296 1 230 239 0 90 chr2 98264158 98264225 -154992358 - MER2 DNA MER2_type 0 345 285 468 218 11 0 chr2 98264258 98264345 -154992238 - MER2 DNA MER2_type -256 89 2 222 328 82 8 chr2 98267724 98267846 -154988737 + MIR SINE MIR 130 260 -2 478 281 48 14 chr2 98270185 98270331 -154986252 + MIR SINE MIR 80 230 -32 558 148 0 0 chr2 98270381 98270469 -154986114 + AluSg/x SINE Alu 199 286 -23 707 184 15 23 chr2 98270735 98271001 -154985582 + GA-rich Low_complexity Low_complexity 1 264 0 2194 90 0 7 chr2 98272216 98272515 -154984068 + AluSq SINE Alu 1 297 -16 1215 99 0 6 chr2 98272518 98272689 -154983894 + AluSg/x SINE Alu 125 294 -16 198 0 0 0 chr2 98272734 98272756 -154983827 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 324 0 0 0 chr2 98272755 98272791 -154983792 + (CA)n Simple_repeat Simple_repeat 1 36 0 342 306 18 0 chr2 98273702 98273813 -154982770 + MIR SINE MIR 74 186 -76 283 277 21 28 chr2 98274303 98274444 -154982139 + CT-rich Low_complexity Low_complexity 3 142 0 469 302 139 5 chr2 98274770 98274985 -154981598 - MIR SINE MIR -11 251 8 647 205 0 17 chr2 98275009 98275249 -154981334 + CT-rich Low_complexity Low_complexity 1 236 0 737 267 53 13 chr2 98275256 98275481 -154981102 - MIR SINE MIR -25 237 4 266 271 90 32 chr2 98276707 98276862 -154979721 + MIR3 SINE MIR 20 183 -25 2689 214 73 8 chr2 98277056 98277701 -154978882 - L1ME3 LINE L1 -44 6118 5432 2648 190 80 13 chr2 98277746 98278242 -154978341 - L1MB3 LINE L1 0 6183 5722 1963 129 0 10 chr2 98278242 98278553 -154978030 + AluSx SINE Alu 1 308 -4 2648 190 80 13 chr2 98278553 98278914 -154977669 - L1MB3 LINE L1 -461 5722 5242 1843 130 4 0 chr2 98278915 98279176 -154977407 - AluJb SINE Alu -15 297 36 4322 180 34 19 chr2 98279186 98279708 -154976875 - L1MB5 LINE L1 -1 6173 5660 2263 105 3 7 chr2 98279708 98280012 -154976571 - AluSq SINE Alu -10 303 1 4322 180 34 19 chr2 98280012 98280857 -154975726 - L1MB5 LINE L1 -514 5660 4787 367 211 110 18 chr2 98280857 98280966 -154975617 + L2 LINE L2 2943 3061 -252 193 220 150 70 chr2 98281257 98281357 -154975226 + L2 LINE L2 3179 3286 -27 269 299 47 31 chr2 98281469 98281596 -154974987 - L2 LINE L2 -837 2477 2349 428 254 65 18 chr2 98281727 98281896 -154974687 - MIR SINE MIR -78 184 8 212 356 81 12 chr2 98282514 98282674 -154973909 + MIR SINE MIR 49 219 -43 677 243 236 12 chr2 98283901 98284235 -154972348 + MLT1J2 LTR MaLR 36 444 -6 201 286 286 0 chr2 98284282 98284380 -154972203 + MIR SINE MIR 121 246 -16 269 376 12 6 chr2 98286192 98286354 -154970229 - L1MC/D LINE L1 -2035 5773 5611 250 280 103 0 chr2 98286379 98286486 -154970097 - MIR SINE MIR -73 135 18 4401 188 25 37 chr2 98286540 98287247 -154969336 - L1MB7 LINE L1 0 6184 5470 865 165 0 0 chr2 98287247 98287380 -154969203 - FLAM_A SINE Alu 0 133 1 4401 188 25 37 chr2 98287380 98288523 -154968060 - L1MB7 LINE L1 -714 5470 4358 211 135 27 0 chr2 98288743 98288780 -154967803 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 241 310 26 26 chr2 98291859 98291972 -154964611 + MIR3 SINE MIR 3 115 -93 2955 148 37 42 chr2 98292827 98293355 -154963228 + L1MCa LINE L1 1745 2269 -4157 1769 224 34 0 chr2 98293355 98293708 -154962875 - MLT1A1 LTR MaLR 0 365 1 2955 148 37 42 chr2 98293708 98293908 -154962675 + L1MCa LINE L1 2269 2469 -3957 * 5076 115 41 53 chr2 98293886 98294075 -154962508 + L1PA15 LINE L1 5427 5617 -828 318 43 0 43 chr2 98294075 98294122 -154962461 - U2 snRNA snRNA -143 45 1 5076 115 41 53 chr2 98294122 98294919 -154961664 + L1PA15 LINE L1 5617 6443 -2 * 7215 238 36 29 chr2 98294917 98296218 -154960365 + L1MCa LINE L1 2452 3741 -2685 1874 155 20 0 chr2 98296218 98296514 -154960069 + AluJb SINE Alu 11 312 0 7215 238 36 29 chr2 98296514 98297328 -154959255 + L1MCa LINE L1 3741 4547 -1879 2136 142 0 3 chr2 98297328 98297631 -154958952 + AluSx SINE Alu 1 302 -10 7215 238 36 29 chr2 98297631 98298241 -154958342 + L1MCa LINE L1 4547 5367 -1059 1969 162 3 0 chr2 98298242 98298544 -154958039 - AluSx SINE Alu -1 311 9 3073 148 13 9 chr2 98298611 98299138 -154957445 + L1MC1 LINE L1 5805 6333 0 1724 293 65 23 chr2 98299169 98299341 -154957242 + L1MEc LINE L1 1020 1183 -5213 744 199 204 5 chr2 98299341 98299527 -154957056 + MER58A DNA MER1_type 2 224 0 1724 293 65 23 chr2 98299527 98300282 -154956301 + L1MEc LINE L1 1183 1986 -4410 373 252 36 0 chr2 98300286 98300397 -154956186 + L1ME2 LINE L1 6050 6164 0 268 313 113 19 chr2 98301153 98301313 -154955270 + MIR3 SINE MIR 20 194 -14 249 302 118 24 chr2 98302134 98302303 -154954280 + MIR SINE MIR 60 244 -18 232 271 178 9 chr2 98304580 98304687 -154951896 - HAL1 LINE L1 -770 1737 1613 1267 140 11 0 chr2 98304873 98305059 -154951524 + AluSq SINE Alu 106 293 -20 366 281 74 98 chr2 98307368 98307735 -154948848 - L2 LINE L2 -1 3271 2914 329 116 74 0 chr2 98307864 98307924 -154948659 + MSTB LTR MaLR 1 63 -301 262 305 106 40 chr2 98308271 98308422 -154948161 - MIR SINE MIR -37 225 65 196 354 49 0 chr2 98308866 98308948 -154947635 + MER5A DNA MER1_type 54 139 -50 182 356 33 0 chr2 98308881 98308971 -154947612 - MER5A DNA MER1_type -59 130 38 * 363 232 30 20 chr2 98308985 98309084 -154947499 - MIR SINE MIR -84 124 25 247 356 26 9 chr2 98309455 98309570 -154947013 + MIR3 SINE MIR 8 124 -84 385 276 49 32 chr2 98309680 98309803 -154946780 - L2 LINE L2 -2 3311 3187 1160 168 5 0 chr2 98309844 98310438 -154946145 + (TGGA)n Simple_repeat Simple_repeat 1 597 0 842 184 6 0 chr2 98310450 98310629 -154945954 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 282 204 31 82 chr2 98312358 98312456 -154944127 + MIR SINE MIR 47 139 -123 224 289 19 58 chr2 98312538 98312642 -154943941 - MIR SINE MIR -50 212 113 238 358 33 8 chr2 98313732 98313852 -154942731 + L2 LINE L2 3191 3313 0 386 187 37 37 chr2 98314168 98314302 -154942281 + L1MC4a LINE L1 7675 7808 0 2560 53 10 0 chr2 98314322 98314624 -154941959 - AluY SINE Alu -6 305 1 532 233 68 72 chr2 98315818 98315913 -154940670 + L1MC5 LINE L1 7649 7743 -218 339 25 0 0 chr2 98315913 98315953 -154940630 + (TG)n Simple_repeat Simple_repeat 1 40 0 532 233 68 72 chr2 98315953 98316136 -154940447 + L1MC5 LINE L1 7743 7926 -35 21 0 0 0 chr2 98317073 98317094 -154939489 + AT_rich Low_complexity Low_complexity 1 21 0 2015 152 27 0 chr2 98317106 98317402 -154939181 + AluSx SINE Alu 1 304 -8 259 262 124 76 chr2 98317824 98318099 -154938484 + L1ME4a LINE L1 5554 5841 -280 2067 131 3 10 chr2 98318105 98318403 -154938180 - AluSx SINE Alu -16 296 1 2210 138 3 0 chr2 98318498 98318809 -154937774 + AluSx SINE Alu 1 312 0 1018 16 0 16 chr2 98318839 98318964 -154937619 + L1PA4 LINE L1 6033 6155 0 1073 119 13 0 chr2 98319046 98319205 -154937378 + AluSg/x SINE Alu 152 312 0 323 232 182 10 chr2 98319205 98319304 -154937279 + L1ME4a LINE L1 5995 6110 -11 290 207 198 43 chr2 98321227 98321343 -154935240 + L2 LINE L2 3179 3312 -1 1494 152 34 71 chr2 98321602 98321725 -154934858 + AluJo SINE Alu 15 141 -171 2146 84 56 11 chr2 98321725 98322012 -154934571 + AluSg SINE Alu 1 300 -10 1494 152 34 71 chr2 98322012 98322184 -154934399 + AluJo SINE Alu 141 299 -13 1582 179 88 0 chr2 98322214 98322499 -154934084 - AluJo SINE Alu -2 310 1 688 273 153 0 chr2 98322584 98322800 -154933783 - MIR SINE MIR 0 262 14 2043 143 10 3 chr2 98324730 98325037 -154931546 + AluJb SINE Alu 1 309 -3 2285 91 0 0 chr2 98325263 98325539 -154931044 + AluSg SINE Alu 21 296 -14 606 158 167 0 chr2 98325551 98325665 -154930918 + FLAM_A SINE Alu 1 133 0 2319 112 0 0 chr2 98325843 98326148 -154930435 + AluSg SINE Alu 1 305 -5 1655 175 49 0 chr2 98326151 98326436 -154930147 + AluJo SINE Alu 1 299 -13 339 269 94 29 chr2 98326441 98326612 -154929971 + L1MC/D LINE L1 5414 5595 -2213 778 252 94 51 chr2 98326612 98327181 -154929402 + L2 LINE L2 2704 3313 0 2214 124 7 3 chr2 98328525 98328832 -154927751 - AluSx SINE Alu -4 308 1 2188 123 0 13 chr2 98329090 98329406 -154927177 + AluSx SINE Alu 1 312 0 209 186 68 17 chr2 98330491 98330550 -154926033 + GA-rich Low_complexity Low_complexity 2 63 0 956 220 161 18 chr2 98330995 98331281 -154925302 - MER58B DNA MER1_type -13 328 2 2268 104 3 3 chr2 98331384 98331681 -154924902 - AluSx SINE Alu -15 297 1 1870 152 13 29 chr2 98332535 98332845 -154923738 + AluJb SINE Alu 1 305 -7 665 289 67 29 chr2 98333101 98333340 -154923243 + MIR SINE MIR 9 256 -6 2373 78 3 0 chr2 98333490 98333773 -154922810 - AluSp SINE Alu -14 299 16 4180 164 10 14 chr2 98334095 98334869 -154921714 + L1MB7 LINE L1 5406 6176 -8 337 306 93 9 chr2 98335214 98335322 -154921261 - L2 LINE L2 0 3272 3156 1972 161 3 0 chr2 98335931 98336229 -154920354 + AluJb SINE Alu 1 299 -13 538 143 13 0 chr2 98336239 98336316 -154920267 + AluJ/FLAM SINE Alu 1 78 -234 1613 181 46 14 chr2 98336355 98336636 -154919947 + AluJo SINE Alu 1 290 -22 306 354 37 31 chr2 98336674 98336835 -154919748 - L2 LINE L2 -603 2711 2550 1915 95 12 0 chr2 98336902 98337154 -154919429 + AluY SINE Alu 49 303 -8 1413 165 106 0 chr2 98337178 98337432 -154919151 + AluSx SINE Alu 14 294 -18 628 238 7 40 chr2 98337433 98337454 -154919129 - MER3 DNA MER1_type -16 146 126 2070 92 27 10 chr2 98337454 98337746 -154918837 + AluSx SINE Alu 1 297 -15 2112 142 3 0 chr2 98337746 98338049 -154918534 + AluSx SINE Alu 1 304 -8 628 238 7 40 chr2 98338049 98338177 -154918406 - MER3 DNA MER1_type -34 128 1 2234 113 36 0 chr2 98338402 98338704 -154917879 + AluSq SINE Alu 1 313 0 757 294 127 67 chr2 98338965 98339533 -154917050 + L2 LINE L2 2336 2937 -377 2343 93 0 17 chr2 98339869 98340170 -154916413 + AluSx SINE Alu 1 296 -16 218 322 61 0 chr2 98342086 98342221 -154914362 - MIR SINE MIR -61 147 27 209 299 61 29 chr2 98342481 98342618 -154913965 - MIR SINE MIR -61 147 27 23 33 0 0 chr2 98342665 98342695 -154913888 + GC_rich Low_complexity Low_complexity 1 30 0 1883 146 0 17 chr2 98343253 98343547 -154913036 + AluJb SINE Alu 12 300 -12 793 169 0 23 chr2 98343794 98343924 -154912659 + AluJo/FLAM SINE Alu 3 129 -173 2294 109 0 0 chr2 98343925 98344219 -154912364 + AluSg SINE Alu 1 294 -16 663 279 45 19 chr2 98344251 98344516 -154912067 + HAL1 LINE L1 1686 1957 -550 2442 84 0 0 chr2 98344814 98345123 -154911460 - AluY SINE Alu 0 311 3 303 313 108 43 chr2 98345130 98345499 -154911084 - L1ME LINE L1 -631 5490 5099 2195 86 13 29 chr2 98345727 98346040 -154910543 - AluSc SINE Alu -1 308 1 2253 121 0 0 chr2 98346040 98346338 -154910245 - AluSx SINE Alu -13 299 2 2296 60 4 0 chr2 98346853 98347120 -154909463 + AluSp SINE Alu 1 268 -45 224 350 58 0 chr2 98347756 98347859 -154908724 + MIR SINE MIR 154 262 0 211 281 16 74 chr2 98347855 98347889 -154908694 - MIR SINE MIR -12 250 216 * 2282 123 0 0 chr2 98347889 98348199 -154908384 - AluSx SINE Alu -2 310 1 211 281 16 74 chr2 98348199 98348285 -154908298 - MIR SINE MIR -46 216 137 2206 118 0 10 chr2 98348439 98348744 -154907839 + AluSx SINE Alu 1 302 -10 2032 128 7 20 chr2 98348746 98349050 -154907533 + AluY SINE Alu 1 300 -11 303 284 52 17 chr2 98349687 98349803 -154906780 - MLT1I LTR MaLR 0 409 290 257 147 0 53 chr2 98350032 98350121 -154906462 + (CGGGGG)n Simple_repeat Simple_repeat 1 84 0 195 42 0 0 chr2 98350234 98350258 -154906325 + (GA)n Simple_repeat Simple_repeat 1 24 0 532 246 116 53 chr2 98350881 98351218 -154905365 - MLT1J2 LTR MaLR 0 446 85 1763 159 40 7 chr2 98351248 98351517 -154905066 + AluJb SINE Alu 1 283 -29 201 39 0 0 chr2 98351517 98351543 -154905040 + (CA)n Simple_repeat Simple_repeat 1 26 0 1763 159 40 7 chr2 98351543 98351575 -154905008 + AluJb SINE Alu 283 312 0 2504 72 3 0 chr2 98351734 98352039 -154904544 - AluY SINE Alu -5 306 1 253 213 0 62 chr2 98353229 98353309 -154903274 - MLT1K LTR MaLR -317 271 197 2643 162 70 6 chr2 98354033 98354544 -154902039 - MER89 LTR ERV1 -2 557 14 321 221 0 15 chr2 98354572 98354640 -154901943 + Tigger5 DNA MER2_type 2254 2320 -3 201 301 58 87 chr2 98356248 98356454 -154900129 - L2 LINE L2 -26 3246 3047 303 306 145 25 chr2 98356556 98356922 -154899661 + L2 LINE L2 2451 2860 -454 1145 48 30 6 chr2 98356960 98357128 -154899455 + (TTTC)n Simple_repeat Simple_repeat 2 173 0 412 180 0 20 chr2 98357128 98357228 -154899355 + CT-rich Low_complexity Low_complexity 2 99 0 2087 131 3 31 chr2 98357229 98357550 -154899033 - AluJb SINE Alu 0 312 1 281 310 152 35 chr2 98357861 98358006 -154898577 - L2 LINE L2 -5 3267 3106 403 253 11 0 chr2 98358063 98358154 -154898429 + L2 LINE L2 3218 3309 -4 181 293 147 17 chr2 98358457 98358573 -154898010 - L2 LINE L2 -560 2754 2624 1866 153 28 7 chr2 98358672 98358959 -154897624 + AluSx SINE Alu 1 293 -19 1389 153 17 13 chr2 98359013 98359248 -154897335 - MER46A DNA MER2_type 0 236 1 250 230 189 0 chr2 98359608 98359682 -154896901 - L2 LINE L2 0 3313 3226 193 316 188 17 chr2 98359775 98359892 -154896691 - L2 LINE L2 -12 3301 3165 478 191 147 38 chr2 98359927 98360084 -154896499 + MIR SINE MIR 73 246 -16 2492 84 0 0 chr2 98360357 98360668 -154895915 + AluY SINE Alu 1 311 0 433 209 151 29 chr2 98360669 98360808 -154895775 + MIR SINE MIR 58 213 -49 657 169 5 109 chr2 98361066 98361267 -154895316 - MER53 DNA DNA -1 188 9 1956 150 0 10 chr2 98361452 98361752 -154894831 - AluJo SINE Alu -15 297 1 1398 223 107 76 chr2 98361780 98362094 -154894489 - L1MC5 LINE L1 -80 7881 7578 2141 130 23 0 chr2 98362094 98362393 -154894190 + AluSx SINE Alu 1 306 -6 1398 223 107 76 chr2 98362393 98362819 -154893764 - L1MC5 LINE L1 -383 7578 7118 2052 131 3 3 chr2 98362824 98363114 -154893469 - AluSx SINE Alu -22 290 1 1806 207 18 92 chr2 98363134 98363742 -154892841 - L1ME1 LINE L1 -4 6162 5600 2132 124 0 3 chr2 98363756 98364055 -154892528 - AluSg SINE Alu -12 298 1 1443 86 0 0 chr2 98364058 98364233 -154892350 - AluSg/x SINE Alu -14 298 124 455 55 0 0 chr2 98364234 98364289 -154892294 - Alu SINE Alu -254 57 3 1351 185 119 65 chr2 98364291 98364673 -154891910 - L1ME1 LINE L1 -559 5607 5247 2229 72 48 7 chr2 98364673 98364963 -154891620 - AluY SINE Alu 0 311 10 1351 185 119 65 chr2 98364963 98365030 -154891553 - L1ME1 LINE L1 -919 5247 5185 360 0 0 0 chr2 98365030 98365070 -154891513 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 2351 71 0 0 chr2 98365070 98365530 -154891053 - AluY SINE Alu 0 460 1 1351 185 119 65 chr2 98365530 98365578 -154891005 - L1ME1 LINE L1 -980 5186 5089 456 270 95 0 chr2 98365842 98365968 -154890615 + MIR SINE MIR 58 195 -67 2272 123 3 0 chr2 98366285 98366593 -154889990 - AluSx SINE Alu -3 309 1 188 271 129 0 chr2 98368279 98368349 -154888234 + MIR3 SINE MIR 119 197 -11 680 206 8 0 chr2 98368471 98368602 -154887981 - MLT1F1 LTR MaLR -435 132 1 1554 141 4 4 chr2 98369499 98369733 -154886850 + AluSx SINE Alu 1 234 -78 331 159 0 0 chr2 98369808 98369871 -154886712 + AluSx SINE Alu 239 301 0 314 131 33 0 chr2 98369890 98369951 -154886632 + GA-rich Low_complexity Low_complexity 4 66 0 1899 229 29 35 chr2 98369951 98370471 -154886112 - L1ME1 LINE L1 -48 6118 5602 213 329 26 0 chr2 98371156 98371232 -154885351 - L3 LINE CR1 -7 1570 1493 2075 123 65 0 chr2 98371331 98371624 -154884959 - AluSq SINE Alu -1 312 1 1995 145 10 6 chr2 98372379 98372690 -154883893 - AluSx SINE Alu 0 312 1 413 238 99 0 chr2 98372736 98372874 -154883709 + MIR SINE MIR 23 173 -73 421 303 25 0 chr2 98372921 98373043 -154883540 + MIR SINE MIR 102 226 -36 2527 81 3 0 chr2 98373073 98373383 -154883200 - AluSp SINE Alu 0 313 3 254 161 0 149 chr2 98373553 98373602 -154882981 - MER69 DNA AcHobo -3 2523 2491 2015 124 58 0 chr2 98373602 98373877 -154882706 - AluJb SINE Alu -15 297 7 254 161 0 149 chr2 98373877 98373914 -154882669 - MER69 DNA AcHobo -35 2491 2450 * 296 213 38 38 chr2 98373900 98373980 -154882603 - MER69 DNA AcHobo -1104 122 43 1763 165 0 32 chr2 98373980 98374289 -154882294 + AluJo SINE Alu 1 299 -13 2177 111 0 25 chr2 98376234 98376550 -154880033 + AluSx SINE Alu 1 308 -4 2300 115 0 7 chr2 98376562 98376867 -154879716 + AluSx SINE Alu 2 304 -8 643 141 0 10 chr2 98377727 98377826 -154878757 + FLAM_A SINE Alu 37 134 -8 2210 104 10 0 chr2 98377826 98378114 -154878469 - AluSq SINE Alu -22 291 1 243 0 0 0 chr2 98378399 98378426 -154878157 + (TG)n Simple_repeat Simple_repeat 2 28 0 454 305 128 6 chr2 98379022 98379237 -154877346 - MIR SINE MIR -20 242 4 187 203 31 0 chr2 98379280 98379344 -154877239 + (TCCA)n Simple_repeat Simple_repeat 1 66 0 231 297 0 0 chr2 98379351 98379415 -154877168 + (CCCA)n Simple_repeat Simple_repeat 1 64 0 936 218 5 0 chr2 98379454 98379642 -154876941 + MER5A DNA MER1_type 1 189 0 1402 145 35 35 chr2 98379737 98379949 -154876634 - L1MB8 LINE L1 0 6178 5964 2307 89 0 3 chr2 98379949 98379960 -154876623 - AluSx SINE Alu -19 293 283 181 0 0 0 chr2 98379960 98379980 -154876603 + (TTTTG)n Simple_repeat Simple_repeat 1 175 0 2307 89 0 3 chr2 98379980 98380260 -154876323 - AluSx SINE Alu -29 283 3 1402 145 35 35 chr2 98380260 98380357 -154876226 - L1MB8 LINE L1 -213 5965 5869 831 149 0 22 chr2 98380442 98380576 -154876007 + AluSg/x SINE Alu 176 306 -6 630 263 45 57 chr2 98380581 98381174 -154875409 - L1ME3A LINE L1 -83 6148 5526 2161 135 0 0 chr2 98381176 98381465 -154875118 - AluSx SINE Alu -23 289 1 888 178 53 0 chr2 98381509 98381661 -154874922 - AluJb SINE Alu -152 160 1 987 210 30 30 chr2 98381699 98381970 -154874613 - L1ME3A LINE L1 -1050 5165 4895 1784 86 22 0 chr2 98381983 98382205 -154874378 - AluSp SINE Alu -86 227 1 236 210 65 0 chr2 98382278 98382340 -154874243 - L1ME3A LINE L1 -1480 4735 4670 333 244 96 0 chr2 98382379 98382514 -154874069 - L1ME3A LINE L1 -4258 2138 1991 1855 116 53 11 chr2 98382596 98382880 -154873703 - AluSx SINE Alu -16 296 1 297 188 24 24 chr2 98382881 98382966 -154873617 - L1M4 LINE L1 -2364 3782 3698 1598 204 95 22 chr2 98383013 98383323 -154873260 - L1MB8 LINE L1 -159 6019 5733 2564 66 3 0 chr2 98383323 98383625 -154872958 + AluSp SINE Alu 3 305 -8 1598 204 95 22 chr2 98383625 98383843 -154872740 - L1MB8 LINE L1 -445 5733 5532 2034 123 0 40 chr2 98383843 98384168 -154872415 - AluSx SINE Alu 0 312 1 2001 147 7 3 chr2 98384170 98384470 -154872113 - AluJb SINE Alu -11 301 1 1598 204 95 22 chr2 98384470 98384810 -154871773 - L1MB8 LINE L1 -646 5532 5023 802 157 63 25 chr2 98384810 98384969 -154871614 + AluJo SINE Alu 1 165 -147 2271 86 7 3 chr2 98384969 98385260 -154871323 - AluSg SINE Alu -18 292 1 369 177 301 7 chr2 98385271 98385407 -154871176 - L1MB8 LINE L1 -1112 5034 4858 396 283 105 37 chr2 98386068 98386259 -154870324 - HAL1 LINE L1 -1177 1330 1127 494 203 74 54 chr2 98386406 98386554 -154870029 - L1ME3A LINE L1 0 6170 6020 325 202 214 11 chr2 98386672 98386761 -154869822 - FRAM SINE Alu -59 107 1 34 0 0 0 chr2 98386764 98386798 -154869785 + AT_rich Low_complexity Low_complexity 1 34 0 1089 189 99 5 chr2 98386891 98387103 -154869480 + AluJo SINE Alu 70 301 -11 420 213 56 0 chr2 98387119 98387227 -154869356 + L1MEd LINE L1 552 665 -5454 31 26 0 0 chr2 98387267 98387305 -154869278 + AT_rich Low_complexity Low_complexity 1 38 0 530 236 56 106 chr2 98387319 98387510 -154869073 - L1ME3A LINE L1 -230 5940 5741 2093 119 14 0 chr2 98387510 98387823 -154868760 - AluSx SINE Alu 0 317 1 2221 112 0 16 chr2 98387824 98388129 -154868454 - AluSx SINE Alu -12 300 1 530 236 56 106 chr2 98388129 98388273 -154868310 - L1ME3A LINE L1 -428 5742 5619 438 207 54 0 chr2 98388315 98388426 -154868157 - L1MEd LINE L1 -5451 668 552 1124 183 101 0 chr2 98388442 98388650 -154867933 - AluJo SINE Alu -11 301 73 244 289 66 53 chr2 98388650 98388802 -154867781 - L1MEd LINE L1 -5546 573 420 1442 209 90 48 chr2 98388896 98389317 -154867266 - MLT1C LTR MaLR -13 454 16 194 287 148 9 chr2 98389724 98389839 -154866744 + MIR SINE MIR 16 146 -116 228 298 186 0 chr2 98390292 98390416 -154866167 - L2 LINE L2 0 3272 3126 2358 87 13 10 chr2 98392312 98392622 -154863961 + AluSx SINE Alu 2 312 0 227 341 35 29 chr2 98393110 98393280 -154863303 + MIR SINE MIR 81 251 -11 246 227 67 13 chr2 98394738 98394813 -154861770 + MIR SINE MIR 70 148 -114 677 186 209 12 chr2 98395789 98395961 -154860622 + MER3 DNA MER1_type 1 206 -3 346 324 7 14 chr2 98396607 98396749 -154859834 + MIR3 SINE MIR 15 155 -53 2456 73 7 0 chr2 98398623 98398926 -154857657 + AluSg SINE Alu 1 305 -5 183 228 0 88 chr2 98401954 98401996 -154854587 + MER5B DNA MER1_type 3 40 -138 2338 84 0 31 chr2 98401996 98402318 -154854265 - AluSq SINE Alu -1 312 1 183 228 0 88 chr2 98402318 98402332 -154854251 + MER5B DNA MER1_type 40 54 -124 1926 146 0 36 chr2 98402343 98402645 -154853938 + AluSx SINE Alu 1 291 -21 681 103 0 19 chr2 98402645 98402744 -154853839 - FLAM_C SINE Alu -189 123 25 436 223 93 43 chr2 98402750 98402889 -154853694 + MER5B DNA MER1_type 33 178 0 2100 64 15 4 chr2 98404777 98405043 -154851540 + AluY SINE Alu 43 311 0 1187 128 6 0 chr2 98405043 98405207 -154851376 + AluSg/x SINE Alu 126 290 -22 656 210 102 0 chr2 98405207 98405364 -154851219 + AluJb SINE Alu 134 306 -6 3437 187 59 15 chr2 98405368 98405738 -154850845 + L1MB8 LINE L1 4475 4827 -1357 2428 75 0 35 chr2 98405738 98406057 -154850526 - AluY SINE Alu -3 308 1 3437 187 59 15 chr2 98406057 98406832 -154849751 + L1MB8 LINE L1 4827 5678 -506 2202 119 3 0 chr2 98406832 98407125 -154849458 - AluSx SINE Alu -18 294 1 3437 187 59 15 chr2 98407125 98407212 -154849371 + L1MB8 LINE L1 5678 5760 -424 3324 106 14 26 chr2 98407221 98407596 -154848987 + MER1A DNA MER1_type 37 406 -2296 2291 78 14 3 chr2 98407596 98407892 -154848691 + AluY SINE Alu 1 299 -12 3324 106 14 26 chr2 98407892 98408015 -154848568 + MER1A DNA MER1_type 406 529 0 1687 141 97 4 chr2 98408082 98408351 -154848232 + AluJo SINE Alu 3 296 -16 920 211 0 0 chr2 98408363 98408529 -154848054 + FRAM SINE Alu 1 166 0 1803 139 17 28 chr2 98408538 98408890 -154847693 + L1MB8 LINE L1 5816 6163 -15 2367 102 0 0 chr2 98408897 98409201 -154847382 - AluSg SINE Alu -6 304 1 899 170 0 0 chr2 98409243 98409384 -154847199 + FLAM_C SINE Alu 1 141 -2 1767 155 13 52 chr2 98409816 98409993 -154846590 - AluJo SINE Alu -15 297 136 1855 115 100 0 chr2 98409993 98410262 -154846321 + AluSg SINE Alu 1 296 -14 1767 155 13 52 chr2 98410262 98410393 -154846190 - AluJo SINE Alu -176 136 1 2350 79 0 0 chr2 98411620 98411900 -154844683 + AluSq SINE Alu 17 296 -17 248 222 0 37 chr2 98411918 98411999 -154844584 - L1MC4 LINE L1 -40 8002 7925 2232 120 3 0 chr2 98412003 98412303 -154844280 - AluSp SINE Alu -12 301 1 1859 179 27 0 chr2 98412307 98412603 -154843980 - AluJb SINE Alu -8 304 1 189 74 0 0 chr2 98412627 98412654 -154843929 + (TG)n Simple_repeat Simple_repeat 2 28 0 1072 208 115 16 chr2 98412664 98412976 -154843607 - L1MC4 LINE L1 -124 7918 7576 565 223 201 36 chr2 98413053 98413277 -154843306 + MIR SINE MIR 2 262 0 549 296 69 19 chr2 98413848 98414064 -154842519 - MIR SINE MIR -10 252 26 335 287 6 48 chr2 98414558 98414624 -154841959 + MER5B DNA MER1_type 1 68 -110 2453 90 0 0 chr2 98414624 98414925 -154841658 + AluSg SINE Alu 1 301 -9 335 287 6 48 chr2 98414925 98415025 -154841558 + MER5B DNA MER1_type 68 160 -18 2076 126 17 0 chr2 98417286 98417580 -154839003 + AluSx SINE Alu 1 299 -13 242 236 18 0 chr2 98417688 98417743 -154838840 + CT-rich Low_complexity Low_complexity 5 60 0 2436 95 0 3 chr2 98420063 98420369 -154836214 - AluSx SINE Alu -7 305 1 2181 159 0 105 chr2 98424311 98424777 -154831806 + MER47B DNA MER2_type 2 418 0 1006 171 49 116 chr2 98425103 98425162 -154831421 - L1MC5 LINE L1 -1000 6961 6900 2563 64 0 19 chr2 98425162 98425474 -154831109 - AluSp SINE Alu -7 306 1 1006 171 49 116 chr2 98425474 98425741 -154830842 - L1MC5 LINE L1 -1061 6900 6657 688 249 98 12 chr2 98426357 98426568 -154830015 + L1ME1 LINE L1 5943 6161 -5 484 246 39 82 chr2 98426570 98426641 -154829942 + Charlie8 DNA MER1_type 59 132 -2285 2225 89 14 0 chr2 98426641 98426932 -154829651 + AluSc SINE Alu 1 295 -14 484 246 39 82 chr2 98426932 98427067 -154829516 + Charlie8 DNA MER1_type 132 256 -2161 538 300 238 7 chr2 98430379 98430656 -154825927 - L2 LINE L2 -1 3312 2972 1031 188 23 50 chr2 98431112 98431330 -154825253 - AluJo SINE Alu -100 212 1 1681 189 40 123 chr2 98431331 98431369 -154825214 - L1 LINE L1 -1670 4476 4436 2490 69 0 10 chr2 98431369 98431674 -154824909 - AluY SINE Alu -9 302 1 1681 189 40 123 chr2 98431674 98431783 -154824800 - L1 LINE L1 -1710 4436 4320 2292 107 3 0 chr2 98431783 98432083 -154824500 + AluSg SINE Alu 2 302 -8 1681 189 40 123 chr2 98432083 98432430 -154824153 - L1 LINE L1 -1826 4320 3946 2189 121 0 3 chr2 98432430 98432727 -154823856 + AluSx SINE Alu 1 296 -16 2276 123 0 13 chr2 98432727 98433035 -154823548 + AluSx SINE Alu 1 304 -8 1681 189 40 123 chr2 98433035 98433269 -154823314 - L1 LINE L1 -2198 3948 3826 1350 137 19 15 chr2 98433278 98433483 -154823100 + AluJb SINE Alu 1 206 -106 566 237 45 32 chr2 98433831 98433987 -154822596 + MIR SINE MIR 72 229 -33 2306 53 9 63 chr2 98434135 98434454 -154822129 + AluY SINE Alu 1 302 -9 1926 130 3 91 chr2 98434488 98434818 -154821765 + AluSx SINE Alu 1 301 -11 2392 84 0 0 chr2 98434818 98435143 -154821440 + AluY SINE Alu 1 325 0 321 293 192 14 chr2 98435204 98435412 -154821171 + MIR SINE MIR 4 248 -14 2433 74 3 22 chr2 98435422 98435733 -154820850 - AluSg SINE Alu -5 305 1 650 250 23 23 chr2 98435779 98435951 -154820632 + MER5B DNA MER1_type 5 176 -2 23 0 0 0 chr2 98435989 98436012 -154820571 + AT_rich Low_complexity Low_complexity 1 23 0 2322 90 0 10 chr2 98436610 98436900 -154819683 - AluSc SINE Alu -22 287 1 239 255 198 19 chr2 98437086 98437192 -154819391 + L2 LINE L2 3143 3267 -5 2148 110 16 13 chr2 98437295 98437603 -154818980 + AluSx SINE Alu 2 310 -2 967 109 14 0 chr2 98437679 98437817 -154818766 - AluSg/x SINE Alu -12 300 161 1723 156 0 19 chr2 98437817 98438080 -154818503 - AluSx SINE Alu -54 258 1 2567 77 0 0 chr2 98438291 98438601 -154817982 + AluSg SINE Alu 1 310 0 352 143 0 16 chr2 98438713 98438776 -154817807 - AluSq SINE Alu 0 301 240 1578 101 0 0 chr2 98438777 98438976 -154817607 - AluSq SINE Alu -114 199 1 186 43 0 0 chr2 98439022 98439045 -154817538 + (GAA)n Simple_repeat Simple_repeat 3 25 0 236 300 0 38 chr2 98439645 98439725 -154816858 + MIR SINE MIR 186 262 0 2506 61 3 3 chr2 98441484 98441780 -154814803 + AluY SINE Alu 1 296 -15 819 194 7 19 chr2 98441794 98441949 -154814634 + AluJb SINE Alu 137 289 -23 681 197 158 0 chr2 98442128 98442280 -154814303 + MER5B DNA MER1_type 3 178 0 370 293 47 42 chr2 98442565 98442756 -154813827 - MIR SINE MIR -55 207 16 250 352 22 0 chr2 98443087 98443178 -154813405 + L3 LINE CR1 1059 1151 -426 1789 136 0 12 chr2 98443304 98443555 -154813028 + AluJo SINE Alu 10 257 -55 1604 207 13 0 chr2 98444324 98444628 -154811955 + AluJo SINE Alu 1 308 -4 2462 79 3 3 chr2 98444663 98444967 -154811616 - AluY SINE Alu -7 304 1 585 251 85 5 chr2 98446360 98446586 -154809997 + L1M4 LINE L1 2562 2795 -3351 724 159 25 45 chr2 98446609 98446647 -154809936 - AluJb SINE Alu -5 307 270 2429 73 3 16 chr2 98446647 98446960 -154809623 + AluSp SINE Alu 1 309 -4 724 159 25 45 chr2 98446960 98447078 -154809505 - AluJb SINE Alu -42 270 154 345 217 36 0 chr2 98447152 98447235 -154809348 + MIR SINE MIR 156 241 -21 1715 160 39 39 chr2 98447261 98447573 -154809010 - AluJb SINE Alu 0 312 1 2211 85 21 3 chr2 98448041 98448324 -154808259 + AluSx SINE Alu 1 288 -24 1088 136 45 17 chr2 98448341 98448518 -154808065 + AluSq SINE Alu 125 306 -7 374 188 58 0 chr2 98448519 98448588 -154807995 - AluJo SINE Alu -25 277 205 827 156 21 14 chr2 98448593 98448734 -154807849 - AluJo SINE Alu -170 142 1 232 305 35 92 chr2 98448980 98449121 -154807462 + L2 LINE L2 3136 3268 -4 2596 74 3 0 chr2 98449179 98449491 -154807092 + AluSp SINE Alu 1 313 0 286 179 0 64 chr2 98449513 98449591 -154806992 - Tigger5 DNA MER2_type 0 2323 2251 255 146 18 18 chr2 98449560 98449615 -154806968 - Tigger5 DNA MER2_type -2268 55 1 * 274 250 0 0 chr2 98449751 98449815 -154806768 - MER92C LTR ERV1 0 554 491 2283 120 0 0 chr2 98449852 98450152 -154806431 + AluSg SINE Alu 1 300 -10 2272 73 23 33 chr2 98450161 98450461 -154806122 + AluSq SINE Alu 1 297 -16 1835 129 4 26 chr2 98450609 98450881 -154805702 + AluSg SINE Alu 1 266 -44 333 215 25 0 chr2 98450900 98450979 -154805604 - MER92B LTR ERV1 -555 81 1 674 130 106 24 chr2 98451260 98451383 -154805200 + FLAM_C SINE Alu 1 133 0 2125 131 7 0 chr2 98451884 98452175 -154804408 - AluJb SINE Alu -19 293 1 1473 171 9 73 chr2 98452175 98452491 -154804092 - AluJo SINE Alu -12 300 5 1654 154 38 27 chr2 98452613 98452906 -154803677 + AluJb SINE Alu 1 296 -16 355 306 33 60 chr2 98453743 98453926 -154802657 + MIR SINE MIR 14 191 -71 2336 107 0 3 chr2 98453933 98454232 -154802351 + AluSx SINE Alu 1 298 -14 1235 257 45 58 chr2 98454232 98454507 -154802076 - L2 LINE L2 -553 2761 2493 2428 87 6 10 chr2 98454507 98454818 -154801765 + AluSx SINE Alu 1 310 -2 1235 257 45 58 chr2 98454818 98455005 -154801578 - L2 LINE L2 -821 2493 2305 231 217 22 0 chr2 98455072 98455118 -154801465 + MER57A LTR ERV1 297 343 -60 1831 154 0 7 chr2 98455150 98455429 -154801154 + AluJo SINE Alu 11 287 -25 2288 110 10 0 chr2 98455438 98455748 -154800835 + AluSp SINE Alu 1 313 0 2407 184 79 18 chr2 98455822 98456327 -154800256 + MLT1F LTR MaLR 1 536 -6 2598 70 0 0 chr2 98456330 98456632 -154799951 + AluSp SINE Alu 2 303 -10 1035 167 6 0 chr2 98456828 98456990 -154799593 + AluJb SINE Alu 137 299 -13 220 48 48 24 chr2 98457509 98457551 -154799032 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2206 116 3 10 chr2 98457553 98457855 -154798728 - AluSx SINE Alu -11 301 2 235 0 57 0 chr2 98457855 98457890 -154798693 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 1539 191 23 0 chr2 98457890 98458147 -154798436 - AluJb SINE Alu -29 283 21 1446 141 74 112 chr2 98458327 98458496 -154798087 - AluSg SINE Alu -10 300 126 2407 88 3 0 chr2 98458496 98458793 -154797790 - AluSx SINE Alu -14 298 1 486 0 0 0 chr2 98458793 98458847 -154797736 + (TTTTA)n Simple_repeat Simple_repeat 4 57 0 2084 117 3 3 chr2 98458847 98459129 -154797454 - AluSx SINE Alu -30 282 1 1446 141 74 112 chr2 98459129 98459269 -154797314 - AluSg SINE Alu -181 129 1 259 333 23 0 chr2 98459790 98459877 -154796706 - MIR3 SINE MIR -46 162 74 1017 198 0 0 chr2 98460361 98460528 -154796055 - FAM SINE Alu -11 174 8 204 67 0 0 chr2 98460996 98461026 -154795557 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 2446 83 0 0 chr2 98461029 98461330 -154795253 - AluY SINE Alu -10 301 1 35 0 0 0 chr2 98461337 98461372 -154795211 + AT_rich Low_complexity Low_complexity 1 35 0 2152 116 24 3 chr2 98461379 98461671 -154794912 - AluSx SINE Alu -14 298 1 699 104 0 0 chr2 98461671 98461777 -154794806 - AluSg/x SINE Alu -3 306 201 290 298 12 0 chr2 98461778 98461862 -154794721 - MIR SINE MIR -115 147 63 1998 145 3 26 chr2 98462556 98462867 -154793716 + AluJb SINE Alu 3 306 -6 220 118 0 0 chr2 98462911 98462945 -154793638 - L2 LINE L2 -17 3296 3263 197 267 22 0 chr2 98463780 98463825 -154792758 + L2 LINE L2 3189 3234 -38 2154 109 7 0 chr2 98464367 98464706 -154791877 - AluSx SINE Alu 0 312 6 21 0 0 0 chr2 98464714 98464735 -154791848 + AT_rich Low_complexity Low_complexity 1 21 0 257 218 90 0 chr2 98465971 98466049 -154790534 + MIR SINE MIR 119 203 -59 * 593 223 38 25 chr2 98466039 98466196 -154790387 + L2 LINE L2 3153 3311 -2 189 0 0 0 chr2 98466297 98466318 -154790265 + (CTGGGG)n Simple_repeat Simple_repeat 1 21 0 183 42 0 0 chr2 98466774 98466798 -154789785 + (CGGGG)n Simple_repeat Simple_repeat 4 27 0 29 60 0 0 chr2 98466922 98466972 -154789611 + GC_rich Low_complexity Low_complexity 1 50 0 207 293 0 40 chr2 98468486 98468561 -154788022 - L2 LINE L2 -27 3245 3174 2219 85 0 17 chr2 98470619 98470913 -154785670 + AluSc SINE Alu 1 289 -20 351 0 0 0 chr2 98470941 98470980 -154785603 + (T)n Simple_repeat Simple_repeat 1 39 0 277 247 21 21 chr2 98471042 98471135 -154785448 - AluSp/q SINE Alu -5 298 206 928 117 0 21 chr2 98471383 98471528 -154785055 + AluSg/x SINE Alu 171 312 0 380 118 0 0 chr2 98471528 98471579 -154785004 + AluSp SINE Alu 133 183 -120 409 141 0 0 chr2 98471579 98471643 -154784940 - AluS SINE Alu -248 65 2 1760 96 172 4 chr2 98471726 98471987 -154784596 + AluSq SINE Alu 1 305 -8 276 214 57 0 chr2 98472094 98472164 -154784419 + MER116 DNA Mariner 6 79 -1 336 163 12 93 chr2 98472171 98472257 -154784326 + L1ME4a LINE L1 6022 6100 -21 711 111 0 19 chr2 98472258 98472366 -154784217 - AluSg/x SINE Alu -15 294 189 1822 129 33 4 chr2 98472367 98472638 -154783945 + AluSx SINE Alu 20 298 -14 2279 89 3 3 chr2 98472897 98473189 -154783394 + AluSx SINE Alu 1 292 -20 433 242 329 9 chr2 98473189 98473639 -154782944 - L2 LINE L2 -839 2475 1882 1950 113 30 50 chr2 98474058 98474360 -154782223 + AluSx SINE Alu 1 296 -16 479 328 42 24 chr2 98474979 98475266 -154781317 - L1MC/D LINE L1 -2065 5743 5452 1389 146 13 0 chr2 98475271 98475504 -154781079 + MER46A DNA MER2_type 1 236 0 2362 119 0 3 chr2 98476507 98476819 -154779764 - AluSx SINE Alu 0 312 2 2106 132 3 16 chr2 98476854 98477165 -154779418 + AluJo SINE Alu 1 307 -5 1340 121 21 11 chr2 98478281 98478471 -154778112 + AluJo SINE Alu 1 192 -120 973 170 7 0 chr2 98478476 98478629 -154777954 + FRAM SINE Alu 16 169 -7 597 224 103 6 chr2 98479072 98479237 -154777346 - MIR SINE MIR -44 218 38 192 244 0 0 chr2 98481721 98481811 -154774772 + (CA)n Simple_repeat Simple_repeat 1 90 0 241 164 48 7 chr2 98481903 98482049 -154774534 + (CA)n Simple_repeat Simple_repeat 1 152 0 190 216 20 13 chr2 98482069 98482222 -154774361 + (CA)n Simple_repeat Simple_repeat 1 154 0 518 206 4 4 chr2 98482270 98482559 -154774024 + (CA)n Simple_repeat Simple_repeat 1 289 0 204 200 0 0 chr2 98482577 98482637 -154773946 + (CA)n Simple_repeat Simple_repeat 2 61 0 350 329 153 6 chr2 98482884 98483054 -154773529 + MIR SINE MIR 20 214 -48 312 322 0 87 chr2 98483691 98483806 -154772777 - L1ME LINE L1 -400 5721 5617 2357 74 0 3 chr2 98483817 98484113 -154772470 + AluSq SINE Alu 1 295 -18 1734 154 30 13 chr2 98484269 98484568 -154772015 - AluJo SINE Alu -8 304 1 2080 117 0 16 chr2 98484600 98484772 -154771811 - AluSx SINE Alu -9 303 137 2272 89 0 7 chr2 98484772 98485074 -154771509 - AluSg SINE Alu -10 300 1 2080 117 0 16 chr2 98485074 98485209 -154771374 - AluSx SINE Alu -175 137 1 824 148 31 0 chr2 98485248 98485376 -154771207 + FLAM_C SINE Alu 1 132 -1 24 32 0 0 chr2 98485399 98485430 -154771153 + AT_rich Low_complexity Low_complexity 1 31 0 198 0 0 0 chr2 98485792 98485814 -154770769 + (T)n Simple_repeat Simple_repeat 1 22 0 6090 31 1 15 chr2 98485818 98486550 -154770033 - SVA Other Other 0 1386 665 270 0 0 0 chr2 98486880 98486910 -154769673 + (CA)n Simple_repeat Simple_repeat 2 31 0 1376 184 29 0 chr2 98487429 98487673 -154768910 - AluJb SINE Alu -61 251 1 964 95 0 63 chr2 98487717 98487875 -154768708 + AluY SINE Alu 12 159 -152 233 29 29 0 chr2 98487901 98487935 -154768648 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 1153 140 0 0 chr2 98487942 98488113 -154768470 + AluSg/x SINE Alu 119 289 -21 2040 131 3 0 chr2 98488260 98488557 -154768026 - AluSx SINE Alu -14 298 1 1586 174 17 20 chr2 98489217 98489511 -154767072 - AluJo SINE Alu -19 293 1 26 0 0 0 chr2 98490208 98490234 -154766349 + AT_rich Low_complexity Low_complexity 1 26 0 189 0 0 0 chr2 98490343 98490364 -154766219 + (TCC)n Simple_repeat Simple_repeat 1 21 0 1714 146 0 0 chr2 98491387 98491634 -154764949 - AluSx SINE Alu -8 304 58 2398 71 0 6 chr2 98491660 98491971 -154764612 + AluY SINE Alu 1 309 -2 249 217 0 43 chr2 98492091 98492160 -154764423 + L1ME3A LINE L1 5194 5259 -887 797 105 18 9 chr2 98492177 98492291 -154764292 + FLAM_A SINE Alu 11 125 -17 342 244 102 71 chr2 98492296 98492345 -154764238 + L1MA4 LINE L1 4372 4418 -1728 2274 84 0 7 chr2 98492345 98492642 -154763941 - AluSg1 SINE Alu -14 295 1 342 244 102 71 chr2 98492642 98492719 -154763864 + L1MA4 LINE L1 4418 4502 -1644 1918 155 3 0 chr2 98492756 98493046 -154763537 + AluJb SINE Alu 6 296 -16 1060 183 13 35 chr2 98493052 98493115 -154763468 + AluJb SINE Alu 75 138 -174 2117 115 0 3 chr2 98493115 98493401 -154763182 + AluSx SINE Alu 1 285 -27 1060 183 13 35 chr2 98493401 98493566 -154763017 + AluJb SINE Alu 138 298 -14 375 210 24 5 chr2 98493569 98493598 -154762985 + L1MA4 LINE L1 5299 5326 -838 2307 83 0 7 chr2 98493598 98493900 -154762683 + AluSc SINE Alu 1 300 -9 375 210 24 5 chr2 98493900 98494007 -154762576 + L1MA4 LINE L1 5326 5443 -721 1964 104 7 7 chr2 98494008 98494288 -154762295 + AluSg SINE Alu 5 284 -26 1001 191 77 0 chr2 98494295 98494568 -154762015 + L1MA4 LINE L1 6005 6298 -2 2172 103 3 3 chr2 98494588 98494888 -154761695 + AluY SINE Alu 1 300 -11 1658 165 37 3 chr2 98494895 98495192 -154761391 + AluJo SINE Alu 6 312 0 1515 232 145 21 chr2 98495278 98495835 -154760748 + L1ME3A LINE L1 5540 6165 -5 2257 105 10 0 chr2 98495917 98496222 -154760361 - AluSx SINE Alu -4 308 1 394 294 119 0 chr2 98496266 98496409 -154760174 + MIR SINE MIR 9 168 -94 590 156 8 78 chr2 98496451 98496579 -154760004 - FRAM SINE Alu 0 176 58 27 57 0 29 chr2 98496998 98497044 -154759539 + AT_rich Low_complexity Low_complexity 1 46 -22 2168 124 0 0 chr2 98497044 98497343 -154759240 - AluSx SINE Alu -13 299 1 27 57 0 29 chr2 98497343 98497366 -154759217 + AT_rich Low_complexity Low_complexity 46 68 0 312 330 0 0 chr2 98497528 98497619 -154758964 - MIR SINE MIR 0 262 172 354 287 6 0 chr2 98497923 98498244 -154758339 + (TG)n Simple_repeat Simple_repeat 1 323 0 200 278 7 0 chr2 98498275 98498419 -154758164 + (TG)n Simple_repeat Simple_repeat 1 145 0 378 315 11 6 chr2 98498451 98498629 -154757954 + (TG)n Simple_repeat Simple_repeat 1 179 0 2288 94 0 28 chr2 98499097 98499417 -154757166 - AluSx SINE Alu -1 311 1 207 191 0 0 chr2 98499504 98499551 -154757032 + A-rich Low_complexity Low_complexity 1 47 0 2214 72 34 0 chr2 98501258 98501549 -154755034 - AluSx SINE Alu -10 302 2 2505 41 0 0 chr2 98501582 98501872 -154754711 - AluY SINE Alu -21 290 1 483 159 23 0 chr2 98501974 98502067 -154754516 + MER5A DNA MER1_type 15 98 -80 187 242 8 141 chr2 98501993 98502121 -154754462 - MER5A DNA MER1_type -23 166 56 * 371 274 95 42 chr2 98502366 98502556 -154754027 + L2 LINE L2 3073 3272 0 1778 124 41 8 chr2 98502739 98503044 -154753539 - AluSx SINE Alu 0 322 9 210 301 0 41 chr2 98503111 98503184 -154753399 - MIR SINE MIR -94 114 45 182 237 0 68 chr2 98503810 98503869 -154752714 - MIR SINE MIR -124 138 84 1014 267 75 50 chr2 98504051 98504467 -154752116 - L2 LINE L2 0 3313 2888 1982 121 76 0 chr2 98504467 98504757 -154751826 + AluSx SINE Alu 1 312 0 2286 80 36 0 chr2 98504758 98505060 -154751523 + AluSq SINE Alu 1 313 0 286 339 124 8 chr2 98505113 98505234 -154751349 - L2 LINE L2 -1 3271 3137 2191 112 3 0 chr2 98505416 98505728 -154750855 + AluSp SINE Alu 1 313 0 574 106 0 87 chr2 98505906 98506043 -154750540 + AluSp/q SINE Alu 208 313 0 2500 50 7 0 chr2 98506048 98506350 -154750233 + AluY SINE Alu 1 304 -7 2186 79 13 44 chr2 98506357 98506675 -154749908 + AluSg SINE Alu 3 310 0 232 73 0 0 chr2 98508059 98508100 -154748483 + Alu SINE Alu 262 302 0 367 327 129 46 chr2 98508103 98508130 -154748453 + L1ME4a LINE L1 4752 4775 -1346 2138 134 0 0 chr2 98508130 98508436 -154748147 + AluSx SINE Alu 1 306 -6 367 327 129 46 chr2 98508436 98508471 -154748112 + L1ME4a LINE L1 4775 4806 -1315 1808 173 3 10 chr2 98508471 98508777 -154747806 - AluJb SINE Alu -8 304 1 367 327 129 46 chr2 98508777 98509262 -154747321 + L1ME4a LINE L1 4806 5724 -397 330 235 165 26 chr2 98509444 98509497 -154747086 + L1ME4a LINE L1 5975 6019 -102 2184 104 7 7 chr2 98509497 98509805 -154746778 - AluSx SINE Alu -4 308 1 330 235 165 26 chr2 98509805 98509866 -154746717 + L1ME4a LINE L1 6019 6105 -16 2128 116 10 0 chr2 98509873 98510167 -154746416 - AluSx SINE Alu -15 297 1 2154 92 48 0 chr2 98510186 98510481 -154746102 - AluY SINE Alu -1 310 2 1048 164 0 0 chr2 98510482 98510647 -154745936 - AluJo/FRAM SINE Alu -14 298 134 1792 161 20 10 chr2 98510647 98510945 -154745638 - AluJb SINE Alu -9 303 3 2091 130 0 0 chr2 98511125 98511418 -154745165 + AluSx SINE Alu 2 294 -18 268 311 89 0 chr2 98511533 98511623 -154744960 - MIR SINE MIR -107 155 58 329 179 107 115 chr2 98511783 98512017 -154744566 - L1MC5 LINE L1 -28 7933 7702 1029 158 12 0 chr2 98512017 98512182 -154744401 - FRAM SINE Alu -11 165 1 249 33 0 0 chr2 98512182 98512212 -154744371 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 504 263 133 19 chr2 98512253 98512561 -154744022 - L1ME4a LINE L1 -68 6053 5711 739 176 7 28 chr2 98513234 98513376 -154743207 - FLAM_C SINE Alu -3 140 2 288 315 82 64 chr2 98513393 98513612 -154742971 - L3 LINE CR1 -1075 502 280 811 259 54 46 chr2 98513825 98513870 -154742713 + L1M4 LINE L1 3689 3732 -2414 1599 162 107 0 chr2 98513870 98514142 -154742441 - AluJb SINE Alu -11 301 1 811 259 54 46 chr2 98514142 98514466 -154742117 + L1M4 LINE L1 3732 4061 -2085 258 54 0 0 chr2 98514466 98514503 -154742080 + AluJb SINE Alu 70 106 -196 277 296 68 15 chr2 98514545 98514677 -154741906 + MER21B LTR ERV1 214 352 -511 883 175 7 0 chr2 98514790 98514933 -154741650 + FRAM SINE Alu 3 146 -30 1937 115 0 83 chr2 98514935 98515022 -154741561 + AluSx SINE Alu 1 94 -218 2423 71 0 3 chr2 98515022 98515330 -154741253 + AluY SINE Alu 1 307 -4 1937 115 0 83 chr2 98515330 98515544 -154741039 + AluSx SINE Alu 94 274 -38 245 70 47 0 chr2 98515544 98515587 -154740996 + (CAAA)n Simple_repeat Simple_repeat 1 45 0 1937 115 0 83 chr2 98515587 98515623 -154740960 + AluSx SINE Alu 274 311 -1 429 254 104 46 chr2 98515626 98515741 -154740842 + MER21B LTR ERV1 485 592 -271 917 129 8 0 chr2 98515741 98515873 -154740710 + FLAM_C SINE Alu 1 133 0 429 254 104 46 chr2 98515873 98515997 -154740586 + MER21B LTR ERV1 592 738 -125 399 244 88 47 chr2 98516063 98516202 -154740381 + L1M4 LINE L1 4408 4559 -1587 2255 89 3 0 chr2 98516202 98516495 -154740088 + AluSc SINE Alu 1 294 -15 399 244 88 47 chr2 98516495 98516548 -154740035 + L1M4 LINE L1 4559 4608 -1538 288 243 135 7 chr2 98516560 98516708 -154739875 + L1M4 LINE L1 4672 4838 -1308 387 198 132 58 chr2 98516840 98516961 -154739622 - L2 LINE L2 -33 3280 3151 2071 110 0 0 chr2 98516962 98517243 -154739340 + AluSx SINE Alu 1 281 -31 192 300 137 35 chr2 98517258 98517485 -154739098 - L2 LINE L2 -352 2962 2713 24 67 0 0 chr2 98519108 98519153 -154737430 + GC_rich Low_complexity Low_complexity 1 45 0 23 33 0 0 chr2 98519376 98519406 -154737177 + GC_rich Low_complexity Low_complexity 1 30 0 372 321 82 22 chr2 98522286 98522554 -154734029 + L1MC5 LINE L1 7515 7798 -163 338 260 6 40 chr2 98522752 98522925 -154733658 + G-rich Low_complexity Low_complexity 2 168 0 * 467 198 27 64 chr2 98522806 98522993 -154733590 + (TGGG)n Simple_repeat Simple_repeat 1 180 0 232 71 24 0 chr2 98523116 98523158 -154733425 - Alu SINE Alu -260 43 1 962 125 62 0 chr2 98523192 98523336 -154733247 + AluSx SINE Alu 1 153 -159 1612 106 0 0 chr2 98523338 98523555 -154733028 + AluSg/x SINE Alu 88 304 -8 643 140 0 0 chr2 98523557 98523650 -154732933 - AluJo/FLAM SINE Alu -187 125 33 25 0 0 0 chr2 98525572 98525597 -154730986 + GC_rich Low_complexity Low_complexity 1 25 0 22 56 0 0 chr2 98525632 98525668 -154730915 + GC_rich Low_complexity Low_complexity 1 36 0 213 39 0 0 chr2 98528953 98528979 -154727604 + (CTG)n Simple_repeat Simple_repeat 1 26 0 345 303 62 0 chr2 98529016 98529161 -154727422 - L1ME LINE L1 -524 5646 5493 2395 46 0 0 chr2 98529830 98530137 -154726446 + AluY SINE Alu 1 307 0 247 209 134 0 chr2 98530668 98530735 -154725848 - L2 LINE L2 -5 3308 3233 2474 48 3 0 chr2 98530766 98531059 -154725524 + AluY SINE Alu 2 295 -16 1643 108 4 9 chr2 98531069 98531300 -154725283 + AluSq SINE Alu 1 230 -83 24 67 0 0 chr2 98531300 98531345 -154725238 + AT_rich Low_complexity Low_complexity 1 45 0 754 139 7 0 chr2 98531376 98531513 -154725070 - L1MB3 LINE L1 -43 6140 6003 2397 62 16 3 chr2 98531695 98532002 -154724581 + AluSx SINE Alu 1 311 -1 467 355 96 30 chr2 98532406 98532772 -154723811 + L2 LINE L2 2919 3308 -5 683 141 8 39 chr2 98533191 98533319 -154723264 + FRAM SINE Alu 48 171 -5 1186 167 142 25 chr2 98533341 98533581 -154723002 + AluJb SINE Alu 9 276 -36 222 260 26 78 chr2 98533739 98533816 -154722767 - L2 LINE L2 0 3272 3200 244 306 269 0 chr2 98534407 98534506 -154722077 - MIR SINE MIR -80 182 111 1906 141 17 0 chr2 98534506 98534796 -154721787 - AluJb SINE Alu -17 295 1 244 306 269 0 chr2 98534796 98534830 -154721753 - MIR SINE MIR -151 111 13 2161 79 24 3 chr2 98537952 98538244 -154718339 + AluSg SINE Alu 1 298 -12 425 277 47 63 chr2 98538559 98538751 -154717832 - MIR SINE MIR -63 145 1 858 197 174 0 chr2 98542783 98542961 -154713622 + AluJo SINE Alu 85 293 -19 186 309 162 0 chr2 98543053 98543121 -154713462 + MIR SINE MIR 76 154 -108 352 159 72 0 chr2 98543122 98543191 -154713392 - AluJ/FRAM SINE Alu -1 301 228 1776 121 15 0 chr2 98544575 98544840 -154711743 - AluSx SINE Alu -43 269 1 954 113 0 0 chr2 98544875 98545008 -154711575 - FLAM_C SINE Alu -10 133 1 203 345 26 43 chr2 98545409 98545525 -154711058 - MIR SINE MIR -1 261 148 1994 129 17 6 chr2 98548070 98548427 -154708156 - MER47A DNA MER2_type 0 366 6 2213 98 0 7 chr2 98548444 98548760 -154707823 - AluSc SINE Alu 0 314 1 1705 173 3 7 chr2 98548767 98549067 -154707516 - AluJo SINE Alu -13 299 1 946 208 88 3 chr2 98550290 98550584 -154705999 + MER33 DNA MER1_type 1 319 -5 192 125 0 0 chr2 98550908 98550940 -154705643 + (TCTG)n Simple_repeat Simple_repeat 2 33 0 1880 118 0 4 chr2 98551918 98552181 -154704402 + AluSg SINE Alu 1 262 -48 1832 171 7 3 chr2 98552503 98552812 -154703771 - AluJb SINE Alu -2 310 1 2289 108 0 0 chr2 98553561 98553866 -154702717 - AluSx SINE Alu -7 305 1 22 35 0 0 chr2 98555566 98555595 -154700988 + AT_rich Low_complexity Low_complexity 1 29 0 2157 109 0 23 chr2 98555595 98555899 -154700684 - AluSq SINE Alu -16 297 1 278 284 102 8 chr2 98556575 98556702 -154699881 - MIR SINE MIR -15 247 109 609 158 11 0 chr2 98557001 98557096 -154699487 - FLAM_A SINE Alu -17 125 30 931 233 71 5 chr2 98557762 98557972 -154698611 + MER58A DNA MER1_type 1 224 0 2210 97 0 0 chr2 98560216 98560504 -154696079 - AluSx SINE Alu -12 300 13 368 229 202 0 chr2 98560508 98560617 -154695966 - MER5B DNA MER1_type 0 178 48 1039 158 0 22 chr2 98560617 98560831 -154695752 - AluJb SINE Alu 0 312 117 2255 119 0 3 chr2 98560943 98561255 -154695328 + AluSx SINE Alu 2 312 0 1491 146 13 0 chr2 98562260 98562493 -154694090 - MER46A DNA MER2_type 0 236 1 457 332 40 23 chr2 98562498 98562799 -154693784 + L1ME4a LINE L1 5452 5757 -2051 305 338 50 29 chr2 98562976 98563115 -154693468 + L1ME4a LINE L1 5980 6121 0 1849 123 29 48 chr2 98563396 98563706 -154692877 - AluSx SINE Alu -8 304 1 559 272 294 8 chr2 98564125 98564571 -154692012 + L2 LINE L2 1882 2479 -835 2168 95 3 3 chr2 98564571 98564867 -154691716 - AluSx SINE Alu -16 296 1 559 272 294 8 chr2 98564867 98564906 -154691677 + L2 LINE L2 2479 2506 -808 2059 121 3 3 chr2 98565126 98565424 -154691159 - AluSx SINE Alu -14 298 1 1586 174 17 20 chr2 98566084 98566378 -154690205 - AluJo SINE Alu -19 293 1 26 0 0 0 chr2 98567077 98567103 -154689480 + AT_rich Low_complexity Low_complexity 1 26 0 189 0 0 0 chr2 98567212 98567233 -154689350 + (TCC)n Simple_repeat Simple_repeat 1 21 0 950 292 86 17 chr2 98569924 98570284 -154686299 + L2 LINE L2 2929 3313 0 248 369 24 0 chr2 98570352 98570436 -154686147 - L2 LINE L2 -201 3071 2986 2220 74 0 14 chr2 98571262 98571558 -154685025 - AluY SINE Alu -19 292 1 1280 69 0 0 chr2 98571568 98571728 -154684855 - AluY SINE Alu -17 294 135 286 183 33 0 chr2 98571829 98571889 -154684694 - L1MD3 LINE L1 -204 7791 7730 2166 211 112 43 chr2 98571911 98572522 -154684061 - L1MD1 LINE L1 -11 6231 5555 2425 54 3 0 chr2 98572522 98572819 -154683764 - AluY SINE Alu -13 298 1 2166 211 112 43 chr2 98572819 98572972 -154683611 - L1MD1 LINE L1 -687 5555 5414 1963 245 93 30 chr2 98572981 98573141 -154683442 - L1MD1 LINE L1 -805 5341 5192 1404 186 41 28 chr2 98573141 98573292 -154683291 - AluJb SINE Alu -17 295 137 2266 93 7 0 chr2 98573292 98573593 -154682990 - AluSp SINE Alu -10 303 1 1404 186 41 28 chr2 98573593 98573732 -154682851 - AluJb SINE Alu -175 137 1 1963 245 93 30 chr2 98573732 98574595 -154681988 - L1MD1 LINE L1 -954 5192 4285 457 221 144 0 chr2 98574668 98574772 -154681811 - MER5B DNA MER1_type -59 119 1 933 131 25 0 chr2 98578154 98578314 -154678269 + MLT1C LTR MaLR 1 164 -303 1345 204 21 50 chr2 98578314 98578367 -154678216 + MLT1C LTR MaLR 132 185 -282 2475 61 0 10 chr2 98578367 98578678 -154677905 + AluY SINE Alu 1 308 -3 1345 204 21 50 chr2 98578678 98578963 -154677620 + MLT1C LTR MaLR 185 460 -7 705 198 0 0 chr2 98580750 98580871 -154675712 + FLAM_A SINE Alu 1 121 -12 1893 105 0 0 chr2 98581997 98582254 -154674329 - AluSq SINE Alu -56 257 1 387 314 67 63 chr2 98582426 98582649 -154673934 - L1ME LINE L1 -349 5772 5549 2266 54 0 0 chr2 98582677 98582953 -154673630 + AluY SINE Alu 32 307 -4 470 309 18 12 chr2 98583246 98583411 -154673172 - MIR SINE MIR -24 238 73 280 259 25 14 chr2 98583412 98583548 -154673035 - L1ME LINE L1 -1083 5063 4931 2205 91 14 0 chr2 98584016 98584302 -154672281 + AluSg SINE Alu 3 292 -18 1056 158 0 32 chr2 98584604 98584794 -154671789 - FRAM SINE Alu 0 176 1 29 28 0 0 chr2 98584794 98584830 -154671753 + AT_rich Low_complexity Low_complexity 1 36 0 1632 101 0 0 chr2 98584837 98585046 -154671537 + AluSx SINE Alu 1 209 -103 1638 157 11 31 chr2 98586870 98587029 -154669554 - AluJb SINE Alu -21 291 139 2121 90 3 17 chr2 98587029 98587045 -154669538 - AluSx SINE Alu -16 296 281 192 40 0 0 chr2 98587045 98587070 -154669513 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 2121 90 3 17 chr2 98587070 98587353 -154669230 - AluSx SINE Alu -31 281 1 1638 157 11 31 chr2 98587353 98587480 -154669103 - AluJb SINE Alu -173 139 11 2121 107 4 0 chr2 98587612 98587950 -154668633 - AluSx SINE Alu 0 339 1 827 169 55 135 chr2 98589987 98590105 -154666478 + AluJo SINE Alu 10 102 -210 2303 64 0 3 chr2 98590105 98590414 -154666169 - AluY SINE Alu 0 308 1 827 169 55 135 chr2 98590414 98590531 -154666052 + AluJo SINE Alu 102 227 -85 468 281 120 0 chr2 98590997 98591189 -154665394 - MLT1K LTR MaLR -342 246 32 337 94 0 16 chr2 98596056 98596120 -154660463 - Alu SINE Alu 0 302 240 279 307 102 102 chr2 98596377 98596437 -154660146 - L2 LINE L2 -5 3267 3208 1754 165 10 3 chr2 98596437 98596598 -154659985 - AluSx SINE Alu -13 299 134 2294 77 7 0 chr2 98596598 98596895 -154659688 - AluSp SINE Alu -14 299 1 1754 165 10 3 chr2 98596895 98597030 -154659553 - AluSx SINE Alu -178 134 1 279 307 102 102 chr2 98597030 98597340 -154659243 - L2 LINE L2 -63 3209 2897 447 148 178 74 chr2 98597348 98597483 -154659100 + AluJo SINE Alu 1 149 -163 1377 169 45 103 chr2 98597503 98597652 -154658931 + AluJo SINE Alu 1 122 -190 207 0 0 0 chr2 98597652 98597675 -154658908 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 1377 169 45 103 chr2 98597675 98597856 -154658727 + AluJo SINE Alu 122 312 0 216 111 0 0 chr2 98597934 98597970 -154658613 + (A)n Simple_repeat Simple_repeat 1 36 0 814 174 0 0 chr2 98598225 98598357 -154658226 + FLAM_C SINE Alu 1 132 -1 304 284 47 7 chr2 98598662 98598810 -154657773 + L1ME4a LINE L1 5964 6117 -4 439 287 53 27 chr2 98599094 98599282 -154657301 + MIR SINE MIR 3 195 -67 2340 91 0 0 chr2 98599284 98599580 -154657003 + AluSx SINE Alu 1 296 -16 401 270 0 0 chr2 98599980 98600069 -154656514 - L2 LINE L2 0 3313 3225 1322 100 0 0 chr2 98600196 98600366 -154656217 - AluSq SINE Alu -143 170 1 376 371 48 41 chr2 98600568 98600883 -154655700 + L1MEd LINE L1 738 1054 -5065 2344 71 0 3 chr2 98600885 98601182 -154655401 + AluSc SINE Alu 1 296 -13 1671 59 27 14 chr2 98601193 98601456 -154655127 + AluY SINE Alu 56 321 0 2118 95 17 7 chr2 98601635 98601930 -154654653 + AluSg SINE Alu 2 299 -11 829 181 83 5 chr2 98601987 98602180 -154654403 - MER20 DNA MER1_type -6 213 6 589 311 174 22 chr2 98602180 98602657 -154653926 - L2 LINE L2 -251 3062 2510 2190 61 37 3 chr2 98603893 98604188 -154652395 - AluY SINE Alu -4 307 3 228 185 0 0 chr2 98605731 98605785 -154650798 + (CA)n Simple_repeat Simple_repeat 1 54 0 989 96 0 0 chr2 98607896 98608021 -154648562 + AluSq/x SINE Alu 17 141 -172 2492 62 0 0 chr2 98608023 98608327 -154648256 + AluY SINE Alu 1 304 -7 1305 164 9 129 chr2 98608329 98608670 -154647913 + AluSx SINE Alu 1 300 -12 410 321 108 14 chr2 98611737 98612014 -154644569 - L1ME LINE L1 -371 5750 5448 1809 185 0 0 chr2 98613260 98613563 -154643020 + AluJo SINE Alu 6 308 -4 227 203 0 0 chr2 98613781 98613840 -154642743 + L1MC3 LINE L1 7712 7770 -15 574 320 24 44 chr2 98613956 98614317 -154642266 + L1ME3A LINE L1 5265 5615 -540 1584 209 70 36 chr2 98614379 98614823 -154641760 + LTR2B LTR ERV1 32 490 0 486 264 183 41 chr2 98615977 98616002 -154640581 - L2 LINE L2 -1 3312 3292 2300 94 3 0 chr2 98616002 98616301 -154640282 + AluY SINE Alu 1 300 -11 486 264 183 41 chr2 98616301 98616620 -154639963 - L2 LINE L2 -21 3292 2919 2262 74 3 40 chr2 98616996 98617319 -154639264 - AluSp SINE Alu -2 311 1 1219 111 0 32 chr2 98617325 98617515 -154639068 - AluSg/x SINE Alu 0 312 129 204 40 0 0 chr2 98618671 98618696 -154637887 + (CAGGC)n Simple_repeat Simple_repeat 4 28 0 474 272 26 71 chr2 98619390 98619553 -154637030 + L1ME3A LINE L1 5793 5962 -200 841 154 0 0 chr2 98619553 98619676 -154636907 + FLAM_C SINE Alu 1 123 -10 474 272 26 71 chr2 98619676 98619904 -154636679 + L1ME3A LINE L1 5962 6160 -2 544 361 172 40 chr2 98619959 98620000 -154636583 - L3 LINE CR1 -3 1574 1540 2295 94 10 0 chr2 98620000 98620308 -154636275 + AluSx SINE Alu 2 312 0 544 361 172 40 chr2 98620308 98621325 -154635258 - L3 LINE CR1 -37 1540 281 1909 96 110 0 chr2 98621922 98622203 -154634380 - AluSx SINE Alu 0 312 1 197 375 23 0 chr2 98623061 98623149 -154633434 - L2 LINE L2 -1040 2274 2185 316 336 32 0 chr2 98623259 98623384 -154633199 - LTR16A LTR ERVL -130 320 192 202 383 89 0 chr2 98624092 98624272 -154632311 - L2 LINE L2 -1544 1770 1575 481 359 100 23 chr2 98625166 98625467 -154631116 - L2 LINE L2 -1 3312 2989 274 304 89 15 chr2 98625536 98625671 -154630912 - L2 LINE L2 -464 2850 2706 270 232 87 106 chr2 98625693 98625743 -154630840 + L1MC5 LINE L1 7661 7710 -251 1661 169 21 3 chr2 98625743 98626033 -154630550 + AluJb SINE Alu 1 295 -17 270 232 87 106 chr2 98626033 98626236 -154630347 + L1MC5 LINE L1 7710 7909 -52 1214 125 6 0 chr2 98626249 98626425 -154630158 - AluSg/x SINE Alu -15 297 121 4154 108 37 10 chr2 98627102 98627596 -154628987 + MER41B LTR ERV1 1 480 -155 2220 121 0 0 chr2 98627596 98627902 -154628681 - AluSx SINE Alu -6 306 1 4154 108 37 10 chr2 98627902 98627960 -154628623 + MER41B LTR ERV1 480 535 -100 1618 120 117 11 chr2 98627960 98628226 -154628357 - AluSg SINE Alu -16 294 1 2096 117 0 13 chr2 98628226 98628525 -154628058 - AluSx SINE Alu -17 295 1 4154 108 37 10 chr2 98628525 98628588 -154627995 + MER41B LTR ERV1 534 635 0 858 220 164 56 chr2 98628966 98629394 -154627189 - MLT1F LTR MaLR -68 474 1 2204 103 7 0 chr2 98631274 98631575 -154625008 + AluSq SINE Alu 1 303 -10 1720 162 0 38 chr2 98634119 98634434 -154622149 + AluJo SINE Alu 1 303 -9 1441 142 71 62 chr2 98635186 98635495 -154621088 + AluSx SINE Alu 1 312 0 311 303 123 8 chr2 98635777 98635899 -154620684 + L2 LINE L2 3137 3272 0 1810 209 5 40 chr2 98635947 98636325 -154620258 + MLT1A1 LTR MaLR 1 365 0 198 287 106 0 chr2 98636513 98636607 -154619976 - L2 LINE L2 -32 3240 3137 2327 94 0 7 chr2 98637910 98638217 -154618366 + AluSx SINE Alu 1 305 -7 2309 93 0 0 chr2 98638217 98638527 -154618056 + AluSg SINE Alu 1 310 0 323 324 20 54 chr2 98639289 98639493 -154617090 - L2 LINE L2 -1 3271 3075 190 224 151 63 chr2 98639538 98639743 -154616840 - L2 LINE L2 -373 2941 2719 207 125 0 0 chr2 98640417 98640457 -154616126 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 330 299 30 70 chr2 98640471 98640672 -154615911 - MLT1J LTR MaLR -63 448 256 2112 110 0 7 chr2 98640889 98641189 -154615394 - AluSx SINE Alu -14 298 1 920 140 136 27 chr2 98641189 98641410 -154615173 + L1MC2 LINE L1 6089 6333 -11 2267 69 3 0 chr2 98641433 98641751 -154614832 - AluY SINE Alu 0 311 3 2148 125 0 3 chr2 98641752 98642064 -154614519 - AluSx SINE Alu -1 311 1 1313 145 50 5 chr2 98642209 98642306 -154614277 - AluJb SINE Alu -81 231 140 180 0 0 0 chr2 98642306 98642326 -154614257 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1313 145 50 5 chr2 98642326 98642449 -154614134 - AluJb SINE Alu -172 140 1 734 226 6 18 chr2 98642449 98642613 -154613970 - MER5B DNA MER1_type -16 162 1 437 266 105 0 chr2 98642775 98642899 -154613684 + MER5B DNA MER1_type 1 137 -41 1848 134 0 26 chr2 98642997 98643302 -154613281 + AluJb SINE Alu 1 297 -15 267 270 27 0 chr2 98643465 98643539 -154613044 - MER5B DNA MER1_type -7 171 96 192 263 73 146 chr2 98643865 98644175 -154612408 - L2 LINE L2 -3 3269 2938 2167 102 3 0 chr2 98644175 98644468 -154612115 + AluSx SINE Alu 1 294 -18 2215 86 0 0 chr2 98644468 98644791 -154611792 + AluY SINE Alu 1 323 0 192 263 73 146 chr2 98644791 98644943 -154611640 - L2 LINE L2 -332 2940 2837 470 270 132 0 chr2 98644994 98645153 -154611430 + MIR SINE MIR 83 262 0 707 260 37 71 chr2 98645754 98646077 -154610506 + L1ME1 LINE L1 5849 6160 -6 213 289 0 0 chr2 98646632 98646684 -154609899 + GA-rich Low_complexity Low_complexity 4 55 0 4048 188 53 13 chr2 98647233 98647656 -154608927 + L1M4 LINE L1 4236 4641 -1505 2268 68 0 10 chr2 98647656 98647948 -154608635 - AluY SINE Alu -22 289 1 4048 188 53 13 chr2 98647948 98648503 -154608080 + L1M4 LINE L1 4641 5253 -893 1080 174 104 0 chr2 98648498 98648521 -154608062 - L1MB7 LINE L1 -145 6039 6017 * 411 259 183 11 chr2 98648521 98648739 -154607844 - L1MB7 LINE L1 -2030 6012 5740 825 140 28 0 chr2 98648739 98648882 -154607701 + L1MB7 LINE L1 6024 6170 -14 411 259 183 11 chr2 98648882 98648925 -154607658 - L1MC4 LINE L1 -2302 5740 5706 2308 88 3 0 chr2 98649214 98649519 -154607064 + AluSx SINE Alu 1 306 -6 328 328 0 33 chr2 98649519 98649641 -154606942 - LTR67 LTR ERVL -436 121 4 273 227 10 82 chr2 98649731 98649828 -154606755 + MLT1L LTR MaLR 305 394 -221 250 197 139 57 chr2 98649984 98650106 -154606477 + Charlie8 DNA MER1_type 142 273 -2144 245 318 114 15 chr2 98650266 98650398 -154606185 + L2 LINE L2 3169 3313 0 192 179 0 0 chr2 98650783 98650822 -154605761 + (CA)n Simple_repeat Simple_repeat 2 40 0 2999 107 15 126 chr2 98651070 98651667 -154604916 - L1MB3 LINE L1 0 6183 5653 376 244 31 103 chr2 98653239 98653444 -154603139 - MIR SINE MIR -53 209 18 340 292 133 22 chr2 98653922 98654148 -154602435 + LTR16A LTR ERVL 27 277 -173 275 270 11 34 chr2 98655147 98655236 -154601347 - MIR SINE MIR -139 123 37 2210 102 0 0 chr2 98656994 98657289 -154599294 + AluSg SINE Alu 1 295 -15 203 133 0 0 chr2 98658179 98658209 -154598374 + (TCC)n Simple_repeat Simple_repeat 3 32 0 1692 185 3 3 chr2 98660021 98660329 -154596254 + AluJo SINE Alu 1 308 -4 2142 98 0 41 chr2 98660337 98660482 -154596101 + AluSq SINE Alu 1 150 -163 2349 76 0 3 chr2 98660482 98660784 -154595799 + AluY SINE Alu 1 301 -10 2142 98 0 41 chr2 98660784 98660954 -154595629 + AluSq SINE Alu 150 303 -10 515 189 0 0 chr2 98661979 98662069 -154594514 - 5S rRNA rRNA -31 90 1 1586 137 51 27 chr2 98662107 98662400 -154594183 - AluJb SINE Alu -8 304 5 323 299 81 10 chr2 98663054 98663251 -154593332 + L1ME LINE L1 5594 5804 -317 1454 143 11 7 chr2 98663319 98663591 -154592992 - AluY SINE Alu -9 302 30 2151 94 30 0 chr2 98663808 98664105 -154592478 + AluSg SINE Alu 5 310 0 468 321 108 14 chr2 98664324 98664601 -154591982 - L1ME LINE L1 -371 5750 5448 222 148 0 0 chr2 98667863 98667917 -154588666 + (TCTCTG)n Simple_repeat Simple_repeat 5 58 0 258 56 0 0 chr2 98669027 98669063 -154587520 + (CA)n Simple_repeat Simple_repeat 2 37 0 * 387 41 0 0 chr2 98669062 98669111 -154587472 + (CG)n Simple_repeat Simple_repeat 1 49 0 180 184 0 0 chr2 98675159 98675208 -154581375 + C-rich Low_complexity Low_complexity 1 49 0 317 22 44 0 chr2 98678198 98678243 -154578340 + (TTTC)n Simple_repeat Simple_repeat 2 48 0 185 0 40 0 chr2 98678363 98678388 -154578195 + (TTTTTA)n Simple_repeat Simple_repeat 4 29 0 255 254 0 0 chr2 98680553 98680616 -154575967 + C-rich Low_complexity Low_complexity 1 63 0 218 234 0 31 chr2 98681055 98681119 -154575464 + CT-rich Low_complexity Low_complexity 1 62 0 207 88 0 0 chr2 98681563 98681597 -154574986 + (T)n Simple_repeat Simple_repeat 1 34 0 216 0 0 0 chr2 98681877 98681901 -154574682 + (T)n Simple_repeat Simple_repeat 1 24 0 355 111 0 0 chr2 98682590 98682644 -154573939 + L1M4 LINE L1 5685 5738 -446 2010 126 11 11 chr2 98682645 98682957 -154573626 + AluSq SINE Alu 1 312 0 2403 95 0 9 chr2 98682992 98683307 -154573276 + AluSx SINE Alu 1 312 0 1405 108 0 0 chr2 98683307 98683492 -154573091 + AluSg/x SINE Alu 126 310 -2 2103 174 3 16 chr2 98684386 98684701 -154571882 - L1PB4 LINE L1 -13 6143 5825 2451 73 3 3 chr2 98684701 98685003 -154571580 - AluY SINE Alu -9 302 1 2103 174 3 16 chr2 98685003 98685055 -154571528 - L1PB4 LINE L1 -331 5825 5779 2369 94 3 3 chr2 98685055 98685352 -154571231 - AluSc SINE Alu -10 299 3 2103 174 3 16 chr2 98685352 98685363 -154571220 - L1PB4 LINE L1 -377 5779 5769 539 158 0 0 chr2 98685363 98685445 -154571138 - AluSx SINE Alu -15 295 214 1036 105 0 15 chr2 98685445 98685578 -154571005 - AluSx SINE Alu -178 135 5 2272 131 0 0 chr2 98685582 98685933 -154570650 - L1PB4 LINE L1 -371 5785 5435 617 256 84 5 chr2 98685936 98686151 -154570432 - L1ME LINE L1 -507 5663 5432 2242 116 0 7 chr2 98686153 98686456 -154570127 - AluSx SINE Alu -11 301 1 24 0 0 0 chr2 98686464 98686488 -154570095 + AT_rich Low_complexity Low_complexity 1 24 0 1743 164 3 21 chr2 98686491 98686778 -154569805 - AluJo SINE Alu -25 287 6 264 144 48 22 chr2 98686792 98686869 -154569714 - L1PB4 LINE L1 -733 5431 5352 438 250 77 125 chr2 98686908 98687044 -154569539 - L1ME LINE L1 -783 5363 5222 2227 119 20 0 chr2 98687044 98687346 -154569237 - AluSx SINE Alu -4 308 1 438 250 77 125 chr2 98687346 98687364 -154569219 - L1ME LINE L1 -924 5222 5205 550 186 10 10 chr2 98687364 98687466 -154569117 - U13 snRNA snRNA -2 102 1 438 250 77 125 chr2 98687466 98687587 -154568996 - L1ME LINE L1 -941 5205 5080 2030 83 38 0 chr2 98687587 98687852 -154568731 + AluY SINE Alu 37 311 0 438 250 77 125 chr2 98687852 98687866 -154568717 - L1ME LINE L1 -1066 5080 5067 2017 158 3 3 chr2 98687866 98688164 -154568419 + AluJb SINE Alu 1 298 -14 438 250 77 125 chr2 98688164 98688223 -154568360 - L1ME LINE L1 -1079 5067 5029 1460 168 3 28 chr2 98688361 98688646 -154567937 + AluSx SINE Alu 35 312 0 816 211 19 67 chr2 98688650 98688830 -154567753 + L1MC5 LINE L1 7605 7765 -196 2574 78 0 0 chr2 98688830 98689138 -154567445 + AluSg SINE Alu 1 308 -2 816 211 19 67 chr2 98689138 98689269 -154567314 + L1MC5 LINE L1 7765 7901 -60 242 315 28 28 chr2 98690907 98691015 -154565568 - MER5A DNA MER1_type 0 189 82 270 0 0 0 chr2 98691224 98691254 -154565329 + (TG)n Simple_repeat Simple_repeat 2 31 0 2072 115 49 0 chr2 98691947 98692235 -154564348 + AluSx SINE Alu 1 302 -10 934 131 0 7 chr2 98692235 98692372 -154564211 + AluSc SINE Alu 174 309 0 190 310 23 58 chr2 98693157 98693244 -154563339 - MIR SINE MIR -148 114 31 595 287 77 19 chr2 98693565 98693774 -154562809 + MER58A DNA MER1_type 4 224 0 1809 141 40 27 chr2 98693797 98694095 -154562488 + AluSx SINE Alu 1 302 -10 840 277 245 37 chr2 98694423 98694899 -154561684 + L2 LINE L2 1567 1942 -1372 2153 120 0 28 chr2 98694899 98695216 -154561367 - AluSx SINE Alu -4 308 1 840 277 245 37 chr2 98695216 98695374 -154561209 + L2 LINE L2 1942 2066 -1248 1671 187 0 13 chr2 98695374 98695674 -154560909 - AluJo SINE Alu -16 296 1 840 277 245 37 chr2 98695674 98695992 -154560591 + L2 LINE L2 2066 2719 -595 422 231 70 49 chr2 98696372 98696515 -154560068 + L2 LINE L2 3168 3313 0 1666 175 32 12 chr2 98696549 98696906 -154559677 + MLT1A1 LTR MaLR 1 364 -1 812 228 42 0 chr2 98697834 98698001 -154558582 - FAM SINE Alu 0 49 1 259 306 71 12 chr2 98698929 98699014 -154557569 + L2 LINE L2 3004 3093 -179 1268 214 105 18 chr2 98699129 98699471 -154557112 + MLT1A2 LTR MaLR 3 374 0 258 333 152 18 chr2 98699531 98699702 -154556881 - L2 LINE L2 -2 3270 3077 418 176 7 52 chr2 98701105 98701258 -154555325 + CT-rich Low_complexity Low_complexity 6 151 0 210 37 0 0 chr2 98701264 98701291 -154555292 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 1148 108 0 6 chr2 98702749 98702891 -154553692 - AluSg/x SINE Alu -19 291 149 1695 130 11 19 chr2 98702891 98703160 -154553423 + AluSx SINE Alu 46 312 0 1148 108 0 6 chr2 98703160 98703175 -154553408 - AluSg/x SINE Alu -161 149 135 326 228 120 0 chr2 98703258 98703350 -154553233 + L2 LINE L2 3211 3313 0 885 191 85 49 chr2 98703605 98703641 -154552942 + L1M4c LINE L1 2134 2167 -4215 2138 112 3 11 chr2 98703641 98703957 -154552626 + AluSx SINE Alu 1 314 0 885 191 85 49 chr2 98703957 98704023 -154552560 + L1M4c LINE L1 2167 2229 -4153 2554 72 3 0 chr2 98704023 98704327 -154552256 + AluY SINE Alu 1 305 -6 885 191 85 49 chr2 98704327 98704727 -154551856 + L1M4c LINE L1 2229 2657 -3725 2437 86 0 16 chr2 98704730 98705045 -154551538 + AluSx SINE Alu 1 310 -2 669 153 7 192 chr2 98705068 98705349 -154551234 + L1MA8 LINE L1 6007 6235 -56 1294 190 18 0 chr2 98705350 98705634 -154550949 - L1MA4 LINE L1 -3 6297 6009 321 182 76 0 chr2 98705701 98705767 -154550816 + Tigger7 DNA MER2_type 4 74 -265 330 161 18 0 chr2 98705780 98705836 -154550747 - AluS SINE Alu -246 57 1 752 158 122 69 chr2 98705837 98706018 -154550565 + L1M4c LINE L1 2784 2983 -3399 2315 101 3 0 chr2 98706018 98706316 -154550267 - AluY SINE Alu -12 299 1 752 158 122 69 chr2 98706316 98706380 -154550203 + L1M4c LINE L1 2983 3042 -3340 326 118 2 30 chr2 98706380 98706460 -154550123 + L1M4 LINE L1 5634 5712 -462 21 57 0 0 chr2 98706863 98706898 -154549685 + AT_rich Low_complexity Low_complexity 1 35 0 2331 99 3 10 chr2 98706900 98707212 -154549371 + AluSx SINE Alu 1 310 -2 2003 161 3 3 chr2 98707230 98707528 -154549055 + AluJb SINE Alu 1 298 -14 205 146 0 42 chr2 98707664 98707712 -154548871 + (TA)n Simple_repeat Simple_repeat 1 46 0 1946 159 7 0 chr2 98707712 98708008 -154548575 - AluJb SINE Alu -14 298 1 1912 153 0 32 chr2 98708011 98708324 -154548259 - AluJo SINE Alu -9 303 1 1568 197 14 7 chr2 98708327 98708621 -154547962 - AluJo SINE Alu -16 296 1 252 107 0 71 chr2 98708623 98708679 -154547904 - L1ME3 LINE L1 -32 6130 6079 990 179 46 130 chr2 98708714 98708888 -154547695 - L1ME3 LINE L1 -70 6092 5905 1726 164 32 7 chr2 98708888 98709168 -154547415 - AluJb SINE Alu -25 287 1 990 179 46 130 chr2 98709168 98709424 -154547159 - L1ME3 LINE L1 -257 5905 5698 1972 115 43 0 chr2 98709424 98709703 -154546880 - AluSg SINE Alu -19 291 1 410 297 54 0 chr2 98709776 98709887 -154546696 - L2 LINE L2 -10 3262 3146 517 264 11 40 chr2 98710358 98710532 -154546051 - MER104 DNA Tc2 -6 174 6 231 200 56 0 chr2 98711662 98711723 -154544860 + MIR SINE MIR 111 175 -87 1678 134 3 60 chr2 98712189 98712335 -154544248 + AluJb SINE Alu 1 123 -189 2322 84 0 19 chr2 98712335 98712645 -154543938 + AluSx SINE Alu 1 304 -8 1678 134 3 60 chr2 98712645 98712797 -154543786 + AluJb SINE Alu 123 282 -30 342 0 0 0 chr2 98712799 98712837 -154543746 + (CA)n Simple_repeat Simple_repeat 2 39 0 826 206 77 5 chr2 98712858 98713067 -154543516 - LTR43 LTR ERV1 -203 399 176 273 265 24 0 chr2 98713262 98713345 -154543238 - LTR43-int LTR ERV1 -1 4797 4713 567 207 50 14 chr2 98713410 98713550 -154543033 - LTR43-int LTR ERV1 -194 6482 6338 2629 65 0 0 chr2 98713983 98714291 -154542292 + AluY SINE Alu 1 308 -3 1084 287 59 49 chr2 98714296 98715018 -154541565 - LTR43-int LTR ERV1 -1784 3014 2349 797 350 40 4 chr2 98715034 98715514 -154541069 - LTR43-int LTR ERV1 -1918 5838 5342 2522 55 0 3 chr2 98715709 98716002 -154540581 + AluY SINE Alu 1 292 -19 1362 218 85 70 chr2 98716350 98716651 -154539932 - LTR43-int LTR ERV1 -2539 2259 1964 708 158 47 24 chr2 98716651 98716778 -154539805 - FLAM_C SINE Alu -2 131 2 1362 218 85 70 chr2 98716778 98716907 -154539676 - LTR43-int LTR ERV1 -2834 1964 1818 2376 57 4 0 chr2 98716907 98717210 -154539373 + AluY SINE Alu 1 304 0 1362 218 85 70 chr2 98717210 98717246 -154539337 - LTR43-int LTR ERV1 -2980 1818 1784 2168 134 134 11 chr2 98717340 98717721 -154538862 - MSTA LTR MaLR 0 428 1 2332 116 6 0 chr2 98718280 98718591 -154537992 + AluSp SINE Alu 1 313 0 919 222 52 20 chr2 98719302 98719507 -154537076 - LTR43 LTR ERV1 -167 435 219 2464 84 0 0 chr2 98719507 98719804 -154536779 - AluSc SINE Alu -12 297 1 919 222 52 20 chr2 98719804 98719850 -154536733 - LTR43 LTR ERV1 -383 219 176 423 38 0 0 chr2 98720173 98720226 -154536357 + (TC)n Simple_repeat Simple_repeat 2 54 0 234 62 0 0 chr2 98720225 98720257 -154536326 + (TG)n Simple_repeat Simple_repeat 1 32 0 * 222 276 35 0 chr2 98720294 98720352 -154536231 - L2 LINE L2 0 3272 3213 1963 143 20 0 chr2 98720762 98721056 -154535527 + AluJo SINE Alu 5 304 -8 319 272 99 38 chr2 98721278 98721448 -154535135 - MIR SINE MIR -64 144 14 290 164 0 16 chr2 98721663 98721724 -154534859 + CT-rich Low_complexity Low_complexity 2 61 0 214 240 160 20 chr2 98721891 98721991 -154534592 + L2 LINE L2 2379 2492 -822 347 287 91 14 chr2 98722060 98722203 -154534380 - MIR SINE MIR -107 155 2 262 305 37 68 chr2 98722659 98722849 -154533734 - L2 LINE L2 -157 3115 2932 2049 142 7 0 chr2 98723359 98723661 -154532922 - AluSg SINE Alu -6 304 1 2314 76 0 3 chr2 98723777 98724068 -154532515 - AluY SINE Alu -21 290 1 959 43 0 9 chr2 98724188 98724303 -154532280 + AluSc SINE Alu 1 114 -195 1326 97 32 0 chr2 98724375 98724534 -154532049 + AluSp SINE Alu 118 285 -28 2271 75 6 31 chr2 98724534 98724853 -154531730 + AluY SINE Alu 1 311 0 1326 97 32 0 chr2 98724853 98724879 -154531704 + AluSp SINE Alu 285 309 -4 2052 120 3 3 chr2 98724888 98725195 -154531388 + AluSp SINE Alu 1 307 0 2309 106 3 3 chr2 98725212 98725524 -154531059 + AluSx SINE Alu 1 312 0 683 109 30 0 chr2 98725634 98725735 -154530848 - FLAM_C SINE Alu -37 106 3 661 231 0 0 chr2 98725740 98725874 -154530709 - FRAM SINE Alu -16 160 27 224 59 29 0 chr2 98727722 98727756 -154528827 + (TTG)n Simple_repeat Simple_repeat 2 36 0 322 225 14 0 chr2 98729387 98729458 -154527125 - MER5A DNA MER1_type -109 80 9 230 56 28 0 chr2 98730151 98730187 -154526396 + (TG)n Simple_repeat Simple_repeat 2 38 0 195 100 0 0 chr2 98731374 98731404 -154525179 + (TA)n Simple_repeat Simple_repeat 2 31 0 2161 98 0 19 chr2 98732626 98732933 -154523650 + AluY SINE Alu 1 301 -10 195 300 100 25 chr2 98733773 98733853 -154522730 - L2 LINE L2 -48 3224 3139 334 235 165 0 chr2 98735630 98735715 -154520868 - MER5A DNA MER1_type -67 122 24 291 181 167 0 chr2 98737439 98737511 -154519072 - MER5A DNA MER1_type -82 107 24 301 167 167 0 chr2 98739309 98739381 -154517202 - MER5A DNA MER1_type -82 107 24 313 211 169 0 chr2 98740574 98740645 -154515938 - MER5A DNA MER1_type -83 106 24 325 181 167 0 chr2 98742443 98742515 -154514068 - MER5A DNA MER1_type -83 106 23 347 155 169 0 chr2 98743884 98743955 -154512628 - MER5A DNA MER1_type -83 106 24 359 155 169 0 chr2 98745745 98745816 -154510767 - MER5A DNA MER1_type -83 106 24 545 279 32 26 chr2 98747877 98748067 -154508516 + MIR SINE MIR 72 262 0 347 311 6 30 chr2 98748195 98748359 -154508224 + MER104 DNA Tc2 18 177 -3 21 0 0 0 chr2 98748988 98749009 -154507574 + AT_rich Low_complexity Low_complexity 1 21 0 209 203 0 17 chr2 98749133 98749164 -154507419 + A-rich Low_complexity Low_complexity 3 34 -26 2059 113 10 3 chr2 98749164 98749465 -154507118 + AluSx SINE Alu 1 303 -9 209 203 0 17 chr2 98749465 98749492 -154507091 + A-rich Low_complexity Low_complexity 34 60 0 27 29 0 0 chr2 98749814 98749848 -154506735 + AT_rich Low_complexity Low_complexity 1 34 0 347 155 169 0 chr2 98750976 98751047 -154505536 - MER5A DNA MER1_type -83 106 24 291 197 169 0 chr2 98752842 98752913 -154503670 - MER5A DNA MER1_type -83 106 24 256 189 19 0 chr2 98754726 98754779 -154501804 - MER5A DNA MER1_type -110 79 26 288 235 153 0 chr2 98756389 98756474 -154500109 + MER5A DNA MER1_type 9 106 -83 304 174 174 0 chr2 98758281 98758350 -154498233 + MER5A DNA MER1_type 26 106 -83 1376 180 8 0 chr2 98760050 98760289 -154496294 - AluSx SINE Alu -71 241 1 489 234 0 78 chr2 98760298 98760439 -154496144 - FLAM_A SINE Alu 0 133 4 424 357 22 22 chr2 98760591 98760818 -154495765 - MIR SINE MIR 0 262 36 271 299 72 10 chr2 98761445 98761542 -154495041 - L3 LINE CR1 -8 1569 1467 224 383 125 0 chr2 98761539 98761659 -154494924 - MIR3 SINE MIR -72 136 2 * 472 325 0 0 chr2 98763954 98764071 -154492512 + FLAM_A SINE Alu 2 118 -15 3856 14 0 2 chr2 98764319 98764764 -154491819 - L1P1 LINE L1 -376 5779 5336 180 0 0 0 chr2 98764854 98764874 -154491709 + (TC)n Simple_repeat Simple_repeat 2 21 0 225 333 0 17 chr2 98765687 98765747 -154490836 - MIR SINE MIR -184 78 20 2011 138 3 10 chr2 98765936 98766248 -154490335 - AluSx SINE Alu 0 312 3 503 271 83 0 chr2 98766972 98767164 -154489419 + L1MA4 LINE L1 6089 6296 -4 210 113 32 16 chr2 98767432 98767494 -154489089 + (TAAA)n Simple_repeat Simple_repeat 2 64 0 2411 41 3 7 chr2 98767513 98767806 -154488777 - AluY SINE Alu -19 292 1 189 284 0 74 chr2 98768912 98769007 -154487576 + L2 LINE L2 2331 2418 -896 2763 40 6 8 chr2 98769169 98769527 -154487056 + L1P2 LINE L1 5381 5748 -422 298 308 139 59 chr2 98769879 98770252 -154486331 + L2 LINE L2 1858 2260 -1054 369 184 22 28 chr2 98770764 98770891 -154485692 + Tigger2 DNA MER2_type 2503 2708 -10 22 0 0 0 chr2 98771066 98771088 -154485495 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr2 98771357 98771387 -154485196 + AT_rich Low_complexity Low_complexity 1 30 0 437 102 0 0 chr2 98772462 98772521 -154484062 - U6 snRNA snRNA -48 59 1 347 155 169 0 chr2 98774585 98774656 -154481927 - MER5A DNA MER1_type -83 106 24 279 196 0 0 chr2 98776463 98776519 -154480064 - MER5A DNA MER1_type -109 80 25 324 139 167 0 chr2 98778321 98778393 -154478190 - MER5A DNA MER1_type -82 107 24 347 155 169 0 chr2 98780192 98780263 -154476320 - MER5A DNA MER1_type -83 106 24 224 220 0 0 chr2 98781513 98781563 -154475020 + (TG)n Simple_repeat Simple_repeat 1 50 0 6555 77 52 5 chr2 98781742 98782694 -154473889 - L1PA7 LINE L1 -12 6142 5182 6253 101 15 49 chr2 98782688 98783547 -154473036 + L1P LINE L1 4116 4930 -1216 7970 9 0 0 chr2 98783547 98784986 -154471597 + L1PA2 LINE L1 4711 6154 -1 6253 101 15 49 chr2 98784986 98785219 -154471364 + L1P LINE L1 4930 5170 -976 348 64 0 0 chr2 98786094 98786141 -154470442 + (TG)n Simple_repeat Simple_repeat 2 48 0 22 35 0 0 chr2 98787527 98787556 -154469027 + AT_rich Low_complexity Low_complexity 1 29 0 18664 30 1 0 chr2 98787818 98790182 -154466401 - L1PA2 LINE L1 -1913 4233 1868 9390 24 0 0 chr2 98790182 98792068 -154464515 + L1PA2 LINE L1 4222 6108 -47 4944 19 46 0 chr2 98792168 98792754 -154463829 + L1PA2 LINE L1 5542 6154 -1 190 374 130 0 chr2 98793113 98793228 -154463355 - L2 LINE L2 -1 3312 3183 487 294 0 24 chr2 98793535 98793661 -154462922 - FLAM_A SINE Alu -9 124 2 193 392 125 0 chr2 98795338 98795458 -154461125 + MIR3 SINE MIR 2 136 -72 * 215 323 83 10 chr2 98795455 98795551 -154461032 + L3 LINE CR1 1467 1569 -8 463 360 18 18 chr2 98796173 98796401 -154460182 + MIR SINE MIR 29 256 -6 678 198 0 25 chr2 98796561 98796682 -154459901 + FLAM_A SINE Alu 6 123 -19 2037 148 0 10 chr2 98796701 98797012 -154459571 + AluSx SINE Alu 1 308 -4 197 361 0 16 chr2 98797206 98797267 -154459316 + MIR SINE MIR 20 79 -183 514 308 0 0 chr2 98798959 98799076 -154457507 - FLAM_A SINE Alu -15 118 2 220 375 125 0 chr2 98801375 98801495 -154455088 + MIR3 SINE MIR 2 136 -72 * 267 287 75 11 chr2 98801492 98801586 -154454997 + L3 LINE CR1 1467 1566 -11 421 370 18 18 chr2 98802217 98802444 -154454139 + MIR SINE MIR 36 262 0 494 213 7 85 chr2 98802596 98802737 -154453846 + FLAM_A SINE Alu 4 133 0 1535 155 8 0 chr2 98802744 98802983 -154453600 + AluSx SINE Alu 1 241 -71 303 179 179 0 chr2 98804136 98804203 -154452380 + MER5A DNA MER1_type 28 106 -83 282 194 179 0 chr2 98806018 98806085 -154450498 + MER5A DNA MER1_type 28 106 -83 336 212 153 0 chr2 98807881 98807966 -154448617 + MER5A DNA MER1_type 9 106 -83 654 47 0 0 chr2 98809637 98809723 -154446860 + (TA)n Simple_repeat Simple_repeat 2 87 0 264 77 0 0 chr2 98810922 98810961 -154445622 + (CA)n Simple_repeat Simple_repeat 2 40 0 21 0 0 0 chr2 98811659 98811680 -154444903 + AT_rich Low_complexity Low_complexity 1 21 0 6671 107 18 1 chr2 98811856 98812914 -154443669 - L1P3 LINE L1 -973 5173 4098 2802 80 23 0 chr2 98812894 98813356 -154443227 + L1P3 LINE L1 5182 5651 -503 * 650 189 8 25 chr2 98813385 98813507 -154443076 + FLAM_A SINE Alu 6 125 -17 2008 140 3 17 chr2 98813514 98813814 -154442769 + AluSx SINE Alu 1 296 -16 3085 173 115 77 chr2 98814241 98815069 -154441514 - MER21B LTR ERV1 -4 859 1 2820 227 39 8 chr2 98815072 98815737 -154440846 + MER44D DNA MER2_type 20 705 0 22 0 0 0 chr2 98816187 98816209 -154440374 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr2 98816273 98816293 -154440290 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1444 219 68 10 chr2 98816799 98817210 -154439373 + L1MC1 LINE L1 5893 6327 -6 30 45 0 0 chr2 98817462 98817506 -154439077 + AT_rich Low_complexity Low_complexity 1 44 0 2342 223 35 14 chr2 98817782 98818333 -154438250 + MER68 LTR ERV1 1 562 0 813 234 25 0 chr2 98818672 98818830 -154437753 + FAM SINE Alu 1 162 -13 2206 100 0 3 chr2 98818840 98819131 -154437452 + AluSc SINE Alu 1 290 -19 1570 201 0 30 chr2 98819474 98819772 -154436811 + AluJo SINE Alu 7 295 -17 3528 34 23 0 chr2 98820367 98820803 -154435780 - L1PA4 LINE L1 0 6155 5710 6727 45 6 0 chr2 98820803 98821693 -154434890 + L1P LINE L1 4461 5355 -791 193 25 0 100 chr2 98822511 98822551 -154434032 + (CCCCCA)n Simple_repeat Simple_repeat 1 36 0 295 203 5 104 chr2 98822568 98822760 -154433823 + C-rich Low_complexity Low_complexity 3 175 0 320 288 101 112 chr2 98823253 98824121 -154432462 + L1M2 LINE L1 562 1420 -5429 254 227 0 0 chr2 98824202 98824246 -154432337 + MIR3 SINE MIR 142 185 -23 2084 116 7 3 chr2 98825160 98825463 -154431120 - AluSg SINE Alu -6 304 1 247 318 61 27 chr2 98825499 98825647 -154430936 - L3 LINE CR1 -125 1452 1300 371 245 82 82 chr2 98826083 98826230 -154430353 + L2 LINE L2 3125 3271 -1 1325 160 41 117 chr2 98826582 98826976 -154429607 + MLT1A1 LTR MaLR 1 364 -1 2464 198 23 65 chr2 98827973 98828614 -154427969 - MER90 LTR ERV1 0 614 1 339 308 13 15 chr2 98828757 98829029 -154427554 + L1M LINE L1 5158 5427 -797 701 284 10 13 chr2 98829031 98829341 -154427242 - L1MCa LINE L1 -3666 2760 2452 9361 52 0 2 chr2 98829410 98831361 -154425222 - L1PA5 LINE L1 -7 6147 4203 9490 84 8 18 chr2 98831440 98832412 -154424171 - L1PA5 LINE L1 -3993 2153 1198 2365 104 0 0 chr2 98832412 98832720 -154423863 - AluY SINE Alu -1 310 3 9490 84 8 18 chr2 98832720 98833308 -154423275 - L1PA5 LINE L1 -4948 1198 606 5209 125 59 9 chr2 98833310 98834255 -154422328 - L1PA15 LINE L1 -37 6128 5143 4121 139 111 31 chr2 98834225 98834436 -154422147 - L1MCa LINE L1 -3957 2469 2276 * 1395 241 86 0 chr2 98834436 98834772 -154421811 + MLT1A1 LTR MaLR 1 365 0 4121 139 111 31 chr2 98834772 98835480 -154421103 - L1MCa LINE L1 -4150 2276 1477 219 36 0 0 chr2 98835486 98835514 -154421069 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1346 145 8 37 chr2 98835519 98835760 -154420823 - AluSx SINE Alu -36 276 43 719 119 126 0 chr2 98835789 98835932 -154420651 - L1MCa LINE L1 -4955 1471 1311 1792 145 40 13 chr2 98835933 98836237 -154420346 - 7SLRNA srpRNA srpRNA -1 319 8 1066 181 15 5 chr2 98836242 98836446 -154420137 - AluJb SINE Alu -20 292 87 3732 161 25 18 chr2 98836446 98837154 -154419429 - L1MCa LINE L1 -5110 1316 604 369 234 30 108 chr2 98837204 98837435 -154419148 + L1MC4 LINE L1 7829 8041 -1 230 418 13 13 chr2 98837442 98837595 -154418988 + L3 LINE CR1 754 906 -671 934 288 102 10 chr2 98837766 98838061 -154418522 - MLT1I LTR MaLR -2 407 86 211 280 149 57 chr2 98838181 98838356 -154418227 + L3 LINE CR1 1212 1402 -175 248 324 20 10 chr2 98838488 98838590 -154417993 + L3 LINE CR1 1428 1530 -47 1488 150 17 0 chr2 98838700 98838933 -154417650 + Tigger7 DNA MER2_type 432 668 -1819 595 224 0 0 chr2 98838947 98839063 -154417520 + Tigger7 DNA MER2_type 2362 2477 -14 2593 212 22 19 chr2 98839066 98839343 -154417240 - L1ME1 LINE L1 -242 5924 5649 2322 221 70 13 chr2 98839343 98839945 -154416638 - MER92B LTR ERV1 0 636 1 2593 212 22 19 chr2 98839945 98840393 -154416190 - L1ME1 LINE L1 -517 5649 5195 248 320 229 22 chr2 98840449 98840484 -154416099 + L2 LINE L2 2172 2198 -1116 2094 82 51 0 chr2 98840484 98840778 -154415805 - AluY SINE Alu -2 309 1 248 320 229 22 chr2 98840778 98841280 -154415303 + L2 LINE L2 2198 2820 -494 230 282 129 24 chr2 98841461 98841585 -154414998 + MIR3 SINE MIR 10 146 -62 343 227 23 0 chr2 98841716 98841804 -154414779 + MER96 DNA MER1_type? 1 90 -85 23 0 0 0 chr2 98841867 98841890 -154414693 + GC_rich Low_complexity Low_complexity 1 23 0 339 293 98 0 chr2 98842459 98842582 -154414001 + MIR SINE MIR 69 203 -59 534 217 61 99 chr2 98842885 98843056 -154413527 + MIR SINE MIR 25 188 -74 2313 69 3 0 chr2 98843056 98843359 -154413224 + AluY SINE Alu 1 304 -7 534 217 61 99 chr2 98843359 98843399 -154413184 + MIR SINE MIR 188 228 -34 1803 125 26 10 chr2 98843835 98844140 -154412443 - AluSq SINE Alu -3 310 1 310 256 163 0 chr2 98844255 98844341 -154412242 - L2 LINE L2 0 3272 3173 215 304 52 52 chr2 98844773 98844888 -154411695 + L2 LINE L2 3155 3269 -3 264 264 124 41 chr2 98845502 98845623 -154410960 - MIR3 SINE MIR -27 181 51 270 245 185 69 chr2 98845980 98846196 -154410387 + L1MC4a LINE L1 5723 5963 -1845 421 273 145 69 chr2 98847046 98847286 -154409297 - L1ME4a LINE L1 -207 5914 5629 2282 99 0 0 chr2 98847286 98847589 -154408994 - AluSc SINE Alu -6 303 1 421 273 145 69 chr2 98847589 98847754 -154408829 - L1ME4a LINE L1 -492 5629 5478 326 254 167 72 chr2 98847763 98848164 -154408419 - L1MC4 LINE L1 0 8042 7604 694 217 133 30 chr2 98848164 98848194 -154408389 - MER58A DNA MER1_type -2196 224 198 2394 115 19 25 chr2 98848194 98848560 -154408023 - THE1B LTR MaLR 0 364 1 694 217 133 30 chr2 98848560 98848732 -154407851 - MER58A DNA MER1_type -2222 198 1 1199 264 159 26 chr2 98848747 98849119 -154407464 - L1MC4 LINE L1 -470 7572 7251 1980 123 14 3 chr2 98849119 98849412 -154407171 - AluSx SINE Alu -16 296 1 1199 264 159 26 chr2 98849412 98849477 -154407106 - L1MC4 LINE L1 -791 7251 7196 2268 94 0 0 chr2 98849477 98849775 -154406808 + AluY SINE Alu 1 298 -13 1199 264 159 26 chr2 98849775 98850056 -154406527 - L1MC4 LINE L1 -846 7196 6699 261 182 62 25 chr2 98850111 98850216 -154406367 - L1ME4a LINE L1 -691 5430 5326 323 118 20 0 chr2 98850240 98850291 -154406292 + MIR SINE MIR 186 237 -25 1605 172 7 17 chr2 98851900 98852202 -154404381 - AluJo SINE Alu -13 299 1 333 120 0 0 chr2 98855787 98855837 -154400746 - AluJ/FLAM SINE Alu -245 57 8 6394 90 8 24 chr2 98855837 98856865 -154399718 + L1PA12 LINE L1 4248 5253 -915 2139 119 0 0 chr2 98856865 98857175 -154399408 + AluSx SINE Alu 1 310 -2 6394 90 8 24 chr2 98857175 98858077 -154398506 + L1PA12 LINE L1 5253 6168 0 660 319 61 34 chr2 98858134 98858579 -154398004 - MLT1J LTR MaLR -16 495 39 43 20 0 0 chr2 98858579 98858629 -154397954 + AT_rich Low_complexity Low_complexity 1 50 0 334 392 48 20 chr2 98858866 98859231 -154397352 + L1ME3A LINE L1 5474 5852 -318 868 173 0 0 chr2 98859373 98859523 -154397060 + AluJb SINE Alu 1 150 -162 330 26 0 0 chr2 98860060 98860099 -154396484 + (CA)n Simple_repeat Simple_repeat 2 40 0 183 42 0 0 chr2 98860494 98860518 -154396065 + (T)n Simple_repeat Simple_repeat 1 24 0 252 174 9 4 chr2 98860902 98860958 -154395625 + L1ME LINE L1 5776 5819 -302 7711 139 21 4 chr2 98860979 98861552 -154395031 + L1PA11 LINE L1 4079 4641 -1533 221 57 29 0 chr2 98861552 98861587 -154394996 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 7711 139 21 4 chr2 98861587 98863071 -154393512 + L1PA11 LINE L1 4641 6170 -4 706 225 45 68 chr2 98863985 98864207 -154392376 - MER20 DNA MER1_type 0 219 3 294 170 0 0 chr2 98864637 98864684 -154391899 - L2 LINE L2 0 3313 3267 278 353 73 27 chr2 98865013 98865163 -154391420 + L3b LINE CR1 1411 1567 -16 2025 122 0 0 chr2 98865284 98865570 -154391013 - AluSx SINE Alu -26 286 1 189 352 28 21 chr2 98865646 98865791 -154390792 - MIR SINE MIR -97 165 20 227 111 0 28 chr2 98865931 98865967 -154390616 + MER53 DNA DNA 155 189 0 366 227 59 42 chr2 98865970 98866089 -154390494 - MIR SINE MIR -80 182 62 334 242 96 64 chr2 98867360 98867517 -154389066 - L3b LINE CR1 -242 1341 1180 817 151 0 8 chr2 98868133 98868259 -154388324 + LTR1B LTR ERV1 1 125 -701 817 108 0 0 chr2 98868258 98868369 -154388214 - MSTB LTR MaLR -315 111 1 2648 160 131 55 chr2 98868461 98869131 -154387452 + LTR1B LTR ERV1 106 826 0 2167 152 78 2 chr2 98869144 98869540 -154387043 - MSTB LTR MaLR 0 426 1 635 141 0 10 chr2 98870118 98870217 -154386366 + MER4A LTR ERV1 1 98 -566 2977 108 0 7 chr2 98870217 98870624 -154385959 + MER4A LTR ERV1 261 664 0 204 250 0 0 chr2 98870705 98870745 -154385838 + L2 LINE L2 3235 3274 -39 1525 195 34 12 chr2 98871184 98871512 -154385071 - L1MB8 LINE L1 -11 6167 5833 736 184 7 0 chr2 98871516 98871652 -154384931 - L1MB8 LINE L1 -420 5754 5618 491 188 0 0 chr2 98871652 98871737 -154384846 + MSTA LTR MaLR 344 428 0 2714 151 9 3 chr2 98871737 98872242 -154384341 + MSTA-int LTR MaLR 1 507 -1144 464 313 123 16 chr2 98872410 98872653 -154383930 + L1M4 LINE L1 3464 3732 -2414 329 250 0 6 chr2 98872688 98872856 -154383727 + (TA)n Simple_repeat Simple_repeat 2 168 0 21 81 0 0 chr2 98873029 98873066 -154383517 + AT_rich Low_complexity Low_complexity 1 37 0 330 222 0 49 chr2 98873069 98873150 -154383433 - FAM SINE Alu 0 179 103 369 220 28 35 chr2 98873469 98873610 -154382973 - L1ME1 LINE L1 -3 6163 6024 232 325 0 8 chr2 98874240 98874360 -154382223 + (TA)n Simple_repeat Simple_repeat 2 120 0 34 24 0 0 chr2 98874391 98874432 -154382151 + AT_rich Low_complexity Low_complexity 1 41 0 817 174 0 0 chr2 98875084 98875222 -154381361 - AluSq SINE Alu -33 280 143 237 258 34 56 chr2 98875724 98875813 -154380770 + MLT2E LTR ERVL 45 131 -497 569 299 113 17 chr2 98878379 98878734 -154377849 + LTR16C LTR ERVL 69 457 -34 293 239 138 77 chr2 98879448 98879578 -154377005 + MIR SINE MIR 48 185 -77 822 291 138 35 chr2 98879890 98880341 -154376242 - MLT1D LTR MaLR 0 505 9 223 186 23 0 chr2 98880395 98880438 -154376145 + CT-rich Low_complexity Low_complexity 2 45 0 260 274 0 0 chr2 98880884 98880957 -154375626 + MER41A LTR ERV1 159 231 -323 742 224 81 120 chr2 98881703 98881958 -154374625 - MLT1A2 LTR MaLR -6 368 131 2248 86 0 0 chr2 98881958 98882283 -154374300 + AluY SINE Alu 2 311 0 742 224 81 120 chr2 98882283 98882410 -154374173 - MLT1A2 LTR MaLR -243 131 1 26 0 0 0 chr2 98884303 98884329 -154372254 + AT_rich Low_complexity Low_complexity 1 26 0 824 30 0 0 chr2 98884329 98884430 -154372153 - L1PA4 LINE L1 -3 6152 6052 2897 50 0 0 chr2 98884430 98884809 -154371774 + L1PA4 LINE L1 5680 6058 -97 1911 131 7 10 chr2 98888804 98889095 -154367488 + AluSx SINE Alu 1 290 -22 326 294 0 0 chr2 98889095 98889180 -154367403 - L1MC4 LINE L1 -1341 6701 6614 1538 212 0 16 chr2 98889447 98889753 -154366830 + AluJb SINE Alu 5 305 -7 338 274 103 43 chr2 98891091 98891325 -154365258 - L1ME3 LINE L1 0 6162 5915 555 317 40 10 chr2 98891369 98891770 -154364813 - L1MEc LINE L1 -4598 1965 1553 30 45 0 0 chr2 98891787 98891831 -154364752 + AT_rich Low_complexity Low_complexity 1 44 0 404 281 118 30 chr2 98892959 98893162 -154363421 + MLT1G1 LTR MaLR 10 230 -365 719 277 40 45 chr2 98893578 98894000 -154362583 + L1M4 LINE L1 4462 4881 -1265 1086 228 20 49 chr2 98894020 98894367 -154362216 - MLT1A1 LTR MaLR -28 337 1 348 284 32 44 chr2 98894398 98894648 -154361935 + L1M4 LINE L1 4910 5156 -990 1725 103 0 0 chr2 98895883 98896107 -154360476 + AluSq SINE Alu 1 224 -89 317 296 56 49 chr2 98896114 98896276 -154360307 - L1MEc LINE L1 -4773 1611 1449 30 0 0 0 chr2 98896740 98896770 -154359813 + AT_rich Low_complexity Low_complexity 1 30 0 709 245 0 13 chr2 98897000 98897155 -154359428 + AluJo SINE Alu 121 273 -39 193 0 94 0 chr2 98898690 98898722 -154357861 + T-rich Low_complexity Low_complexity 5 39 0 1465 194 68 0 chr2 98898736 98899015 -154357568 - AluSg SINE Alu -12 298 1 209 365 31 10 chr2 98899790 98899886 -154356697 - L2 LINE L2 -33 3280 3183 467 198 117 36 chr2 98900917 98901028 -154355555 + AluSq/x SINE Alu 6 125 -187 1332 131 41 0 chr2 98901439 98901660 -154354923 - MER30 DNA MER1_type 0 230 1 558 83 10 21 chr2 98901710 98901806 -154354777 + (TA)n Simple_repeat Simple_repeat 1 95 0 22 0 0 0 chr2 98903022 98903044 -154353539 + AT_rich Low_complexity Low_complexity 1 22 0 1971 121 7 11 chr2 98903534 98903844 -154352739 - AluSc SINE Alu 0 309 1 22 0 0 0 chr2 98903844 98903866 -154352717 + AT_rich Low_complexity Low_complexity 1 22 0 451 260 0 39 chr2 98903869 98903996 -154352587 - FLAM_C SINE Alu -21 122 1 2011 94 3 53 chr2 98904066 98904386 -154352197 - AluY SINE Alu -7 304 1 272 286 51 31 chr2 98905702 98905800 -154350783 - L2 LINE L2 -33 3280 3181 1748 155 7 30 chr2 98908260 98908564 -154348019 - AluSx SINE Alu -11 301 5 212 240 0 0 chr2 98908745 98908795 -154347788 + (TG)n Simple_repeat Simple_repeat 1 50 0 664 200 35 0 chr2 98911321 98911466 -154345117 - Tigger3(Golem) DNA MER2_type -1 3028 2879 203 203 62 0 chr2 98911704 98911768 -154344815 + A-rich Low_complexity Low_complexity 4 71 0 312 283 0 44 chr2 98911875 98911988 -154344595 - MLT1G3 LTR MaLR -239 291 184 261 359 13 0 chr2 98913657 98913735 -154342848 + MIR SINE MIR 3 81 -181 282 29 0 0 chr2 98913845 98913880 -154342703 + (TG)n Simple_repeat Simple_repeat 2 36 0 * 405 0 0 0 chr2 98913879 98913924 -154342659 + (TA)n Simple_repeat Simple_repeat 2 46 0 420 293 80 33 chr2 98914123 98914611 -154341972 - L1M4 LINE L1 -1980 4166 3656 740 254 0 6 chr2 98914625 98914802 -154341781 + FRAM SINE Alu 1 175 -1 244 269 119 57 chr2 98914813 98915240 -154341343 - L1M4 LINE L1 -2515 3631 3151 2222 120 0 7 chr2 98915240 98915539 -154341044 + AluSx SINE Alu 5 301 -11 244 269 119 57 chr2 98915539 98915742 -154340841 - L1M4 LINE L1 -2995 3151 2962 2268 120 6 3 chr2 98915842 98916200 -154340383 - L1PA13 LINE L1 -4 6159 5801 305 180 102 54 chr2 98916205 98916341 -154340242 - Charlie5 DNA MER1_type -45 2579 2432 1366 198 20 13 chr2 98916341 98916644 -154339939 - AluJb SINE Alu -7 305 1 305 180 102 54 chr2 98916644 98916674 -154339909 - Charlie5 DNA MER1_type -192 2432 2405 297 359 13 32 chr2 98916796 98916952 -154339631 - L2 LINE L2 -2409 905 753 362 356 52 54 chr2 98917427 98917542 -154339041 - L2 LINE L2 -209 3104 2990 486 33 0 0 chr2 98917542 98917602 -154338981 + (TG)n Simple_repeat Simple_repeat 1 60 0 362 356 52 54 chr2 98917602 98917802 -154338781 - L2 LINE L2 -323 2990 2793 185 237 51 0 chr2 98918526 98918585 -154337998 + L2 LINE L2 1966 2027 -1287 205 250 0 48 chr2 98919400 98919484 -154337099 + GA-rich Low_complexity Low_complexity 2 81 0 318 148 0 0 chr2 98919639 98919693 -154336890 + (CATATA)n Simple_repeat Simple_repeat 5 58 0 1600 165 42 45 chr2 98919779 98920160 -154336423 + LTR1 LTR ERV1 242 621 -164 29 0 0 0 chr2 98920551 98920580 -154336003 + AT_rich Low_complexity Low_complexity 1 29 0 544 244 0 0 chr2 98920611 98920726 -154335857 - FLAM_A SINE Alu -18 115 1 1959 185 52 40 chr2 98921065 98921541 -154335042 + MER66B LTR ERV1 3 484 -2 234 267 0 70 chr2 98921608 98921694 -154334889 - MIR SINE MIR -11 251 172 2976 109 337 6 chr2 98921851 98922472 -154334111 - LTR12 LTR ERV1 0 826 1 527 250 98 43 chr2 98922658 98922934 -154333649 - pTR5 LTR ERV1 -1410 1028 738 35 0 0 0 chr2 98922985 98923020 -154333563 + AT_rich Low_complexity Low_complexity 1 35 0 1548 206 24 14 chr2 98923262 98923554 -154333029 + AluJo SINE Alu 1 295 -17 526 265 0 34 chr2 98924614 98924805 -154331778 - FLAM_C SINE Alu 0 143 1 1452 171 17 0 chr2 98925972 98926236 -154330347 + AluSx SINE Alu 39 306 0 360 0 0 0 chr2 98926531 98926571 -154330012 + (TG)n Simple_repeat Simple_repeat 1 40 0 820 238 176 19 chr2 98926630 98927055 -154329528 - LTR54B LTR ERV1 -6 492 1 1665 141 17 17 chr2 98928888 98929179 -154327404 + AluSx SINE Alu 1 291 -21 1612 192 10 29 chr2 98930572 98930884 -154325699 + AluJo SINE Alu 1 306 -6 182 324 44 29 chr2 98931013 98931081 -154325502 - MER5A DNA MER1_type -6 183 115 317 195 85 51 chr2 98931186 98931304 -154325279 - L1ME LINE L1 -497 5624 5503 189 267 0 0 chr2 98931466 98931511 -154325072 + MIR SINE MIR 90 134 -128 775 133 0 80 chr2 98931515 98931665 -154324918 - FLAM_C SINE Alu 0 143 6 1460 147 4 20 chr2 98931666 98931731 -154324852 + AluJo SINE Alu 72 137 -175 2301 89 7 7 chr2 98931731 98932033 -154324550 + AluSq SINE Alu 1 302 -11 1460 147 4 20 chr2 98932033 98932205 -154324378 + AluJo SINE Alu 137 307 -5 2527 77 0 0 chr2 98932205 98932516 -154324067 + AluY SINE Alu 1 311 0 2468 67 3 0 chr2 98932529 98932827 -154323756 + AluSp SINE Alu 5 303 -10 370 145 16 0 chr2 98932822 98932883 -154323700 + L1MB7 LINE L1 5317 5378 -805 735 169 76 0 chr2 98932883 98933001 -154323582 + AluSq/x SINE Alu 2 127 -185 3497 178 56 34 chr2 98933018 98933148 -154323435 + L1MB7 LINE L1 5366 5492 -692 1710 177 3 23 chr2 98933148 98933453 -154323130 + AluJb SINE Alu 6 304 -8 3497 178 56 34 chr2 98933453 98933878 -154322705 + L1MB7 LINE L1 5492 5945 -239 1646 153 73 10 chr2 98933878 98934166 -154322417 - AluJb SINE Alu -3 309 4 3497 178 56 34 chr2 98934166 98934355 -154322228 + L1MB7 LINE L1 5945 6128 -56 287 381 32 0 chr2 98934456 98934582 -154322001 + L2 LINE L2 3124 3253 -19 2475 70 0 0 chr2 98934865 98935166 -154321417 + AluY SINE Alu 1 301 -10 2206 117 0 7 chr2 98935520 98935819 -154320764 + AluSx SINE Alu 1 297 -15 2997 60 6 6 chr2 98935821 98936187 -154320396 + L1PA8 LINE L1 5806 6171 -1 1226 162 86 116 chr2 98936382 98936685 -154319898 + AluJo SINE Alu 1 294 -18 2422 71 0 3 chr2 98936785 98937081 -154319502 - AluY SINE Alu -16 295 1 1152 97 0 0 chr2 98937082 98937226 -154319357 - AluSq/x SINE Alu -169 144 1 1741 185 3 3 chr2 98937234 98937542 -154319041 - AluJo SINE Alu -4 308 1 203 133 0 0 chr2 98939352 98939382 -154317201 + (GGA)n Simple_repeat Simple_repeat 3 32 0 2377 78 7 0 chr2 98940271 98940567 -154316016 - AluSq SINE Alu -15 298 1 220 287 106 0 chr2 98941871 98941965 -154314618 + L2 LINE L2 3137 3240 -32 1820 206 5 40 chr2 98942153 98942531 -154314052 - MLT1A1 LTR MaLR 0 365 1 276 343 0 9 chr2 98942596 98942701 -154313882 - L2 LINE L2 -32 3240 3137 1597 129 71 62 chr2 98942983 98943292 -154313291 - AluSx SINE Alu 0 312 1 1775 156 0 41 chr2 98944043 98944357 -154312226 - AluJo SINE Alu -11 301 1 2278 103 7 0 chr2 98946893 98947194 -154309389 - AluSq SINE Alu -10 303 1 1678 242 21 6 chr2 98949120 98949743 -154306840 - L1PA3 LINE L1 -188 5967 5336 189 0 0 0 chr2 98949816 98949837 -154306746 + (T)n Simple_repeat Simple_repeat 1 21 0 216 333 0 17 chr2 98950672 98950732 -154305851 - MIR SINE MIR -184 78 20 2070 131 3 10 chr2 98950924 98951236 -154305347 - AluSx SINE Alu 0 312 3 538 255 83 0 chr2 98951960 98952152 -154304431 + L1MA4 LINE L1 6089 6296 -4 236 123 46 15 chr2 98952420 98952485 -154304098 + (TAAA)n Simple_repeat Simple_repeat 2 68 0 2503 41 3 7 chr2 98952497 98952792 -154303791 - AluY SINE Alu -17 294 1 22 35 0 0 chr2 98954951 98954980 -154301603 + AT_rich Low_complexity Low_complexity 1 29 0 193 78 0 78 chr2 98954983 98955034 -154301549 + (TTAAA)n Simple_repeat Simple_repeat 2 48 0 57 16 0 0 chr2 98955040 98955104 -154301479 + AT_rich Low_complexity Low_complexity 1 64 0 2191 86 0 20 chr2 98955672 98955975 -154300608 + AluSc SINE Alu 1 297 -12 2119 69 18 0 chr2 98956264 98956565 -154300018 - AluY SINE Alu 0 306 1 303 235 61 20 chr2 98958220 98958318 -154298265 - Charlie1 DNA MER1_type -2557 204 103 198 0 0 0 chr2 98959612 98959634 -154296949 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 462 48 16 0 chr2 98959634 98959697 -154296886 - L1PA3 LINE L1 -6 6149 6086 240 200 0 0 chr2 98961004 98961054 -154295529 + (TG)n Simple_repeat Simple_repeat 1 50 0 6917 83 52 5 chr2 98961233 98962186 -154294397 - L1PA7 LINE L1 -12 6142 5182 7135 99 13 8 chr2 98962187 98963228 -154293355 + L1PA7 LINE L1 4123 5169 -977 276 77 0 0 chr2 98964110 98964149 -154292434 + (TG)n Simple_repeat Simple_repeat 2 40 0 22 35 0 0 chr2 98965535 98965564 -154291019 + AT_rich Low_complexity Low_complexity 1 29 0 312 159 174 0 chr2 98967014 98967083 -154289500 - MER5A DNA MER1_type -83 106 26 243 121 379 0 chr2 98968874 98968932 -154287651 - MER5A DNA MER1_type -83 106 27 21 36 0 0 chr2 98970484 98970512 -154286071 + AT_rich Low_complexity Low_complexity 1 28 0 370 129 171 0 chr2 98970733 98970803 -154285780 - MER5A DNA MER1_type -82 107 26 388 120 173 0 chr2 98972591 98972666 -154283917 - MER5A DNA MER1_type -83 106 19 6074 24 1 2 chr2 98974261 98975289 -154281294 + L1P2 LINE L1 4671 5698 -457 259 308 139 59 chr2 98975680 98976053 -154280530 + L2 LINE L2 1858 2260 -1054 183 361 21 10 chr2 98976145 98976242 -154280341 + L2 LINE L2 2430 2527 -787 24 32 0 0 chr2 98976356 98976387 -154280196 + AT_rich Low_complexity Low_complexity 1 31 0 413 169 8 30 chr2 98976558 98976685 -154279898 + Tigger2 DNA MER2_type 2503 2718 0 22 0 0 0 chr2 98976858 98976880 -154279703 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr2 98977149 98977179 -154279404 + AT_rich Low_complexity Low_complexity 1 30 0 431 119 0 0 chr2 98978257 98978316 -154278267 - U6 snRNA snRNA -48 59 1 267 74 108 14 chr2 98980290 98980438 -154276145 + (TA)n Simple_repeat Simple_repeat 2 163 0 423 254 84 52 chr2 98980534 98980747 -154275836 - MIR SINE MIR -25 237 18 197 313 100 25 chr2 98981613 98981693 -154274890 + L2 LINE L2 3139 3224 -48 31 0 0 0 chr2 98982538 98982569 -154274014 + AT_rich Low_complexity Low_complexity 1 31 0 337 81 91 40 chr2 98982591 98982690 -154273893 - AluSc SINE Alu -32 267 164 1879 108 4 22 chr2 98983115 98983392 -154273191 - AluY SINE Alu -39 272 1 477 278 168 8 chr2 98983684 98983965 -154272618 - MER102a DNA MER1_type 0 330 19 24 32 0 0 chr2 98984219 98984250 -154272333 + AT_rich Low_complexity Low_complexity 1 31 0 508 284 32 26 chr2 98986878 98987068 -154269515 + MIR SINE MIR 72 262 0 1635 16 0 0 chr2 98987080 98987268 -154269315 - AluYb8 SINE Alu -3 315 128 266 329 6 30 chr2 98987392 98987556 -154269027 + MER104 DNA Tc2 18 177 -3 21 0 0 0 chr2 98988183 98988204 -154268379 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 31 chr2 98988343 98988359 -154268224 + AT_rich Low_complexity Low_complexity 1 16 -15 2034 126 7 3 chr2 98988359 98988669 -154267914 + AluSx SINE Alu 1 311 -1 21 0 0 31 chr2 98988669 98988684 -154267899 + AT_rich Low_complexity Low_complexity 16 31 0 257 304 90 34 chr2 98988982 98989248 -154267335 - L1ME LINE L1 -315 5806 5526 575 84 0 36 chr2 98989780 98989863 -154266720 + MADE1 DNA Mariner 1 80 0 388 205 0 97 chr2 98990587 98990856 -154265727 + C-rich Low_complexity Low_complexity 1 242 0 304 196 0 0 chr2 98991660 98991716 -154264867 - MER5A DNA MER1_type -110 79 24 3860 155 87 45 chr2 98992580 98993420 -154263163 + Tigger1 DNA MER2_type 1544 2418 0 1082 251 36 12 chr2 98993420 98993835 -154262748 + L1M3b LINE L1 1330 1754 -4527 3772 144 20 6 chr2 98994126 98994765 -154261818 - Tigger1 DNA MER2_type -1299 1119 472 1292 315 11 11 chr2 98994770 98995151 -154261432 + L1M3de LINE L1 882 1262 -5391 266 191 0 0 chr2 98995256 98995298 -154261285 + Tigger4(Zombi) DNA MER2_type 2690 2731 0 308 196 5 35 chr2 98995886 98995984 -154260599 + L1ME4a LINE L1 5728 5819 -355 789 206 22 27 chr2 98996005 98996189 -154260394 + MER58A DNA MER1_type 39 221 -3 962 145 0 0 chr2 98997109 98997254 -154259329 - AluSq SINE Alu -160 153 9 3385 151 15 11 chr2 98997346 98997871 -154258712 - MER1A DNA MER1_type 0 527 1 281 182 0 0 chr2 98999434 98999478 -154257105 + MIR3 SINE MIR 142 185 -23 327 219 158 18 chr2 99000175 99000289 -154256294 + L1ME4a LINE L1 5992 6121 0 1967 110 7 3 chr2 99000397 99000696 -154255887 - AluSg SINE Alu -10 300 1 314 311 67 0 chr2 99000732 99000867 -154255716 - L3 LINE CR1 -125 1452 1309 196 340 168 28 chr2 99000959 99001244 -154255339 - L2 LINE L2 0 3272 2948 372 271 62 68 chr2 99001285 99001462 -154255121 + L2 LINE L2 3096 3271 -1 1328 154 43 122 chr2 99001809 99002204 -154254379 + MLT1A1 LTR MaLR 1 364 -1 2552 202 20 65 chr2 99003203 99003846 -154252737 - MER90 LTR ERV1 0 614 1 355 298 20 19 chr2 99003985 99004261 -154252322 + L1M LINE L1 5152 5427 -745 786 291 10 10 chr2 99004263 99004572 -154252011 - L1MCa LINE L1 -3666 2760 2452 260 200 0 0 chr2 99004570 99004625 -154251958 - L1PA16 LINE L1 0 6166 6112 * 9493 48 11 0 chr2 99004637 99006571 -154250012 - L1PA5 LINE L1 -7 6147 4203 11075 86 8 22 chr2 99006650 99007621 -154248962 - L1PA5 LINE L1 -3993 2153 1169 267 54 0 0 chr2 99007621 99007658 -154248925 + (TTTG)n Simple_repeat Simple_repeat 1 37 0 1982 98 0 0 chr2 99007667 99007932 -154248651 - AluY SINE Alu -44 267 3 11075 86 8 22 chr2 99007932 99008521 -154248062 - L1PA5 LINE L1 -4985 1161 606 5147 126 68 10 chr2 99008523 99009463 -154247120 - L1PA15 LINE L1 -37 6128 5143 4041 135 112 48 chr2 99009430 99009645 -154246938 - L1MCa LINE L1 -3954 2472 2272 * 1462 232 86 0 chr2 99009645 99009981 -154246602 + MLT1A1 LTR MaLR 1 365 0 4041 135 112 48 chr2 99009981 99010701 -154245882 - L1MCa LINE L1 -4154 2272 1477 186 71 0 0 chr2 99010707 99010735 -154245848 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1393 144 8 33 chr2 99010737 99010980 -154245603 - AluSx SINE Alu -33 279 43 668 133 126 0 chr2 99011009 99011152 -154245431 - L1MCa LINE L1 -4955 1471 1311 180 0 0 0 chr2 99011153 99011173 -154245410 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1776 127 42 14 chr2 99011173 99011457 -154245126 - 7SLRNA srpRNA srpRNA -21 299 8 1049 186 15 5 chr2 99011462 99011666 -154244917 - AluJb SINE Alu -20 292 87 3739 159 28 17 chr2 99011666 99012371 -154244212 - L1MCa LINE L1 -5110 1316 604 333 234 32 85 chr2 99012463 99012651 -154243932 + L1MC4 LINE L1 7864 8041 -1 979 275 102 10 chr2 99012982 99013277 -154243306 - MLT1I LTR MaLR -2 407 86 183 316 138 46 chr2 99013398 99013572 -154243011 + L3 LINE CR1 1213 1402 -175 248 324 20 10 chr2 99013704 99013806 -154242777 + L3 LINE CR1 1428 1530 -47 1594 148 0 0 chr2 99013912 99014156 -154242427 + Tigger7 DNA MER2_type 425 668 -1819 603 224 0 0 chr2 99014170 99014286 -154242297 + Tigger7 DNA MER2_type 2358 2473 -14 2574 220 23 14 chr2 99014289 99014566 -154242017 - L1ME1 LINE L1 -242 5924 5651 2345 218 70 13 chr2 99014566 99015168 -154241415 - MER92B LTR ERV1 0 636 1 2574 220 23 14 chr2 99015168 99015612 -154240971 - L1ME1 LINE L1 -515 5651 5195 291 307 230 19 chr2 99015676 99015701 -154240882 + L2 LINE L2 2183 2201 -1113 2171 72 41 0 chr2 99015701 99015993 -154240590 - AluY SINE Alu -7 304 1 291 307 230 19 chr2 99015993 99016494 -154240089 + L2 LINE L2 2201 2820 -494 222 300 82 27 chr2 99016689 99016799 -154239784 + MIR SINE MIR 31 146 -62 352 216 23 0 chr2 99016930 99017018 -154239565 + MER96 DNA MER1_type? 1 90 -85 23 0 0 0 chr2 99017081 99017104 -154239479 + GC_rich Low_complexity Low_complexity 1 23 0 339 293 98 0 chr2 99017673 99017796 -154238787 + MIR SINE MIR 69 203 -59 552 212 61 99 chr2 99018099 99018270 -154238313 + MIR SINE MIR 25 188 -74 2261 77 3 0 chr2 99018270 99018568 -154238015 + AluY SINE Alu 1 299 -12 552 212 61 99 chr2 99018568 99018608 -154237975 + MIR SINE MIR 188 228 -34 1783 123 27 10 chr2 99019046 99019346 -154237237 - AluSq SINE Alu -8 305 1 333 224 176 0 chr2 99019461 99019546 -154237037 - L2 LINE L2 0 3272 3173 194 266 80 80 chr2 99019989 99020102 -154236481 + L2 LINE L2 3155 3267 -5 282 256 124 41 chr2 99020717 99020838 -154235745 - MIR3 SINE MIR -27 181 51 295 244 180 69 chr2 99021195 99021412 -154235171 + L1MC4a LINE L1 5723 5963 -1845 426 272 146 67 chr2 99022263 99022502 -154234081 - L1ME4a LINE L1 -207 5914 5629 2247 103 0 0 chr2 99022502 99022804 -154233779 - AluSc SINE Alu -7 302 1 426 272 146 67 chr2 99022804 99022969 -154233614 - L1ME4a LINE L1 -492 5629 5478 310 261 156 67 chr2 99022978 99023381 -154233202 - L1MC4 LINE L1 0 8042 7604 623 228 162 25 chr2 99023381 99023409 -154233174 - MER58A DNA MER1_type -2196 224 201 2336 123 19 22 chr2 99023409 99023774 -154232809 - THE1B LTR MaLR 0 364 1 623 228 162 25 chr2 99023774 99023942 -154232641 - MER58A DNA MER1_type -2219 201 1 1258 259 205 27 chr2 99023957 99024303 -154232280 - L1MC4 LINE L1 -470 7572 7289 1904 120 21 3 chr2 99024303 99024594 -154231989 - AluSx SINE Alu -16 296 1 1258 259 205 27 chr2 99024594 99024659 -154231924 - L1MC4 LINE L1 -753 7289 7237 2399 60 0 0 chr2 99024659 99024957 -154231626 + AluY SINE Alu 1 298 -13 1258 259 205 27 chr2 99024957 99025238 -154231345 - L1MC4 LINE L1 -805 7237 6756 261 182 62 25 chr2 99025293 99025398 -154231185 - L1ME4a LINE L1 -691 5430 5326 293 157 20 0 chr2 99025416 99025467 -154231116 + MIR SINE MIR 186 237 -25 1618 165 16 16 chr2 99027073 99027382 -154229201 - AluJo SINE Alu -3 309 1 180 281 47 0 chr2 99031722 99031786 -154224797 - MIR SINE MIR -29 233 167 345 264 70 42 chr2 99034781 99034927 -154221656 - MIR SINE MIR -62 146 2 186 318 153 38 chr2 99035063 99035174 -154221409 - L2 LINE L2 -1670 1644 1547 1367 180 56 32 chr2 99035174 99035458 -154221125 - AluJb SINE Alu -10 292 2 186 318 153 38 chr2 99035458 99035607 -154220976 - L2 LINE L2 -1767 1547 1354 194 270 108 0 chr2 99035667 99035741 -154220842 - L2 LINE L2 -2102 1212 1131 837 279 183 38 chr2 99036002 99036688 -154219895 + L2 LINE L2 2187 2990 -282 1768 122 10 61 chr2 99039559 99039853 -154216730 + AluSg SINE Alu 1 279 -31 852 269 54 62 chr2 99039919 99040763 -154215820 + L1M1 LINE L1 2922 3761 -3804 311 167 167 0 chr2 99041778 99041850 -154214733 - MER5A DNA MER1_type -82 107 24 342 143 171 0 chr2 99042991 99043061 -154213522 - MER5A DNA MER1_type -82 107 26 15824 35 1 5 chr2 99045288 99047986 -154208597 - L1PA3 LINE L1 -3 6152 3458 9085 57 1 0 chr2 99048284 99050324 -154206259 + L1PA2 LINE L1 4121 6152 -3 814 202 0 0 chr2 99050325 99050493 -154206090 + L1P LINE L1 1996 2163 -3983 337 191 155 12 chr2 99051225 99051309 -154205274 + MER5A DNA MER1_type 11 106 -83 287 147 191 0 chr2 99053116 99053184 -154203399 + MER5A DNA MER1_type 26 106 -83 313 212 153 0 chr2 99054577 99054662 -154201921 - MER5A DNA MER1_type -83 106 9 240 121 379 0 chr2 99056437 99056495 -154200088 - MER5A DNA MER1_type -83 106 27 1715 232 36 20 chr2 99057163 99057944 -154198639 - L1MC/D LINE L1 -745 5401 4797 234 188 146 0 chr2 99058011 99058059 -154198524 - Tigger5 DNA MER2_type -2268 55 1 1701 146 100 6 chr2 99058077 99058407 -154198176 + MER46B DNA MER2_type 1 236 0 1024 219 93 21 chr2 99058407 99058795 -154197788 - L1MC/D LINE L1 -1365 4781 4366 461 264 31 0 chr2 99058861 99059024 -154197559 - L1MC/D LINE L1 -1753 4393 4226 575 224 19 0 chr2 99059070 99059218 -154197365 - MER58B DNA MER1_type -33 308 37 1353 259 36 17 chr2 99059264 99059732 -154196851 - L1MC/D LINE L1 -1939 4207 3731 2374 192 52 16 chr2 99059739 99060316 -154196267 - L1MC1 LINE L1 -9 6324 5727 785 247 70 3 chr2 99060314 99060614 -154195969 - L1MC/D LINE L1 -2402 3744 3425 * 6509 250 45 16 chr2 99061449 99063063 -154193520 - L1 LINE L1 -1007 5139 3364 2096 139 0 7 chr2 99063063 99063365 -154193218 + AluSq SINE Alu 1 300 -13 6509 250 45 16 chr2 99063365 99064588 -154191995 - L1 LINE L1 -2782 3364 2177 348 335 59 0 chr2 99065348 99065518 -154191065 + L2 LINE L2 2726 2905 -409 27 62 0 0 chr2 99068211 99068259 -154188324 + AT_rich Low_complexity Low_complexity 1 48 0 3281 142 28 8 chr2 99068613 99069217 -154187366 + MER4E LTR ERV1 1 616 -150 309 183 169 0 chr2 99069527 99069598 -154186985 + MER5A DNA MER1_type 24 106 -83 301 194 167 0 chr2 99071402 99071474 -154185109 + MER5A DNA MER1_type 24 107 -82 381 127 169 0 chr2 99073275 99073346 -154183237 + MER5A DNA MER1_type 24 106 -83 274 268 0 0 chr2 99076381 99076437 -154180146 + MER5A DNA MER1_type 24 79 -110 381 127 169 0 chr2 99077188 99077259 -154179324 + MER5A DNA MER1_type 24 106 -83 259 236 167 14 chr2 99079054 99079126 -154177457 + MER5A DNA MER1_type 24 106 -83 338 197 169 0 chr2 99080928 99080999 -154175584 + MER5A DNA MER1_type 24 106 -83 24 0 0 0 chr2 99081200 99081224 -154175359 + AT_rich Low_complexity Low_complexity 1 24 0 343 161 0 0 chr2 99082828 99082884 -154173699 + MER5A DNA MER1_type 24 79 -110 340 153 167 0 chr2 99085248 99085320 -154171263 + MER5A DNA MER1_type 24 107 -82 422 230 30 0 chr2 99087003 99087103 -154169480 + L1PA12 LINE L1 799 901 -6680 480 271 237 21 chr2 99087118 99087409 -154169174 + L1PA12 LINE L1 814 1167 -6414 1246 228 93 15 chr2 99087413 99087911 -154168672 + L1PA12 LINE L1 791 1361 -6220 * 1978 178 98 62 chr2 99087907 99088289 -154168294 - L1PA12 LINE L1 -6407 1174 764 2143 138 0 0 chr2 99088289 99088601 -154167982 + AluSx SINE Alu 1 312 0 1978 178 98 62 chr2 99088601 99088770 -154167813 - L1PA12 LINE L1 -6817 764 603 1864 239 62 19 chr2 99089019 99089745 -154166838 + L1MC/D LINE L1 4472 5271 -875 1413 146 41 12 chr2 99089760 99090006 -154166577 + L1MC/D LINE L1 5322 5574 -759 732 209 155 5 chr2 99090019 99090206 -154166377 - MSTB-int LTR MaLR -1434 217 3 2044 213 22 7 chr2 99090259 99090667 -154165916 - MSTB LTR MaLR -12 414 1 2756 218 95 12 chr2 99090668 99091433 -154165150 - L1M4c LINE L1 -4516 1787 824 333 186 0 0 chr2 99092349 99092408 -154164175 - MER5A DNA MER1_type -108 81 23 314 157 171 0 chr2 99094207 99094277 -154162306 - MER5A DNA MER1_type -82 107 26 228 195 81 81 chr2 99095301 99095388 -154161195 - L1MD3 LINE L1 -1265 6730 6644 21 0 0 0 chr2 99095831 99095852 -154160731 + AT_rich Low_complexity Low_complexity 1 21 0 254 0 83 0 chr2 99096186 99096222 -154160361 + T-rich Low_complexity Low_complexity 2 40 0 2060 125 3 0 chr2 99096225 99096513 -154160070 - AluSp SINE Alu -24 289 1 4863 177 25 2 chr2 99096810 99097730 -154158853 - L1MA3 LINE L1 0 6305 5365 2192 119 3 0 chr2 99098212 99098507 -154158076 - AluSg SINE Alu -14 296 1 304 232 8 88 chr2 99099535 99099660 -154156923 - Alu SINE Alu -8 292 178 26111 53 0 2 chr2 99099914 99103109 -154153474 - L1P LINE L1 -2950 3196 9 23 33 0 0 chr2 99103466 99103496 -154153087 + AT_rich Low_complexity Low_complexity 1 30 0 1449 237 60 36 chr2 99105369 99106517 -154150066 - L1MEc LINE L1 -3063 3152 1953 1122 293 55 55 chr2 99106874 99107478 -154149105 - L1MEc LINE L1 -5753 643 40 443 273 116 38 chr2 99108322 99108615 -154147968 - L1ME4a LINE L1 -283 5838 5523 21 0 0 0 chr2 99108636 99108657 -154147926 + AT_rich Low_complexity Low_complexity 1 21 0 2038 120 7 3 chr2 99108658 99108950 -154147633 + AluSg SINE Alu 1 293 -17 1899 88 4 0 chr2 99109708 99109957 -154146626 - MER4E LTR ERV1 0 766 517 416 185 11 33 chr2 99110469 99110561 -154146022 + L1PA12 LINE L1 815 904 -6677 426 214 0 11 chr2 99110574 99110663 -154145920 + L1PA12 LINE L1 814 901 -6680 371 228 18 88 chr2 99110663 99110777 -154145806 + L1PA12 LINE L1 798 903 -6678 534 244 221 32 chr2 99110777 99111089 -154145494 + L1PA12 LINE L1 799 1169 -6412 380 223 48 10 chr2 99111092 99111195 -154145388 + L1PA12 LINE L1 798 904 -6677 367 250 22 0 chr2 99111195 99111287 -154145296 + L1PA12 LINE L1 799 892 -6689 433 151 47 0 chr2 99111311 99111397 -154145186 + L1PA12 LINE L1 814 903 -6678 507 157 0 0 chr2 99111411 99111494 -154145089 + L1PA12 LINE L1 815 897 -6684 598 225 269 31 chr2 99111513 99112007 -154144576 + L1PA12 LINE L1 799 1174 -6407 392 236 0 11 chr2 99112020 99112109 -154144474 + L1PA12 LINE L1 814 901 -6680 390 210 17 84 chr2 99112104 99112223 -154144360 + L1PA12 LINE L1 793 903 -6678 * 389 239 11 0 chr2 99112236 99112324 -154144259 + L1PA12 LINE L1 815 903 -6678 469 178 11 0 chr2 99112337 99112427 -154144156 + L1PA12 LINE L1 814 904 -6677 284 231 17 94 chr2 99112539 99112656 -154143927 + L1PA12 LINE L1 793 900 -6681 1183 233 47 11 chr2 99112659 99112938 -154143645 + L1PA12 LINE L1 802 1090 -6491 3015 205 86 7 chr2 99112938 99113643 -154142940 - L1PA12 LINE L1 -6411 1170 5 243 250 69 14 chr2 99113822 99113894 -154142689 + MIR SINE MIR 100 175 -87 19752 168 22 9 chr2 99113936 99117714 -154138869 + L1PA12 LINE L1 6 3827 -3757 3617 227 42 63 chr2 99117721 99119357 -154137226 + L1PA12 LINE L1 1131 2264 -4734 1028 99 49 0 chr2 99119329 99119491 -154137092 + L1PA12 LINE L1 2808 2977 -4604 * 586 67 0 0 chr2 99119491 99119566 -154137017 - L1PA12 LINE L1 -4918 1543 1469 * 3698 196 18 11 chr2 99119564 99120351 -154136232 + L1PA12 LINE L1 1530 2321 -4140 * 6519 40 0 2 chr2 99120347 99121145 -154135438 - L1PA2 LINE L1 -2484 3662 2867 15667 26 0 0 chr2 99121145 99123663 -154132920 + L1PA2 LINE L1 3631 6152 -3 6776 151 20 6 chr2 99123664 99124836 -154131747 + L1PA12 LINE L1 2311 3499 -2962 * 7921 796 201 36 chr2 99124829 99124844 -154131739 + L1PA10 LINE L1 2369 2380 -3788 7921 113 23 5 chr2 99124844 99125631 -154130952 + L1PA10 LINE L1 4157 4928 -1240 2199 124 0 0 chr2 99125631 99125922 -154130661 - AluSc SINE Alu -18 291 1 7921 113 23 5 chr2 99125922 99127178 -154129405 + L1PA10 LINE L1 4928 6166 -2 7921 796 201 36 chr2 99127178 99128438 -154128145 + L1PA10 LINE L1 2380 3431 -2737 378 0 0 0 chr2 99128438 99128480 -154128103 + (CA)n Simple_repeat Simple_repeat 1 42 0 7921 796 201 36 chr2 99128480 99128811 -154127772 + L1PA10 LINE L1 3431 6166 -2 3226 143 170 24 chr2 99128786 99129485 -154127098 - L1P LINE L1 -1356 4790 3990 * 186 216 27 0 chr2 99132710 99132747 -154123836 + L2 LINE L2 3004 3041 -231 198 0 0 0 chr2 99132865 99132887 -154123696 + (CAT)n Simple_repeat Simple_repeat 2 23 0 519 259 85 36 chr2 99132898 99133122 -154123461 - MIR SINE MIR -25 237 3 200 206 0 0 chr2 99133681 99133715 -154122868 + polypyrimidine Low_complexity Low_complexity 2 35 0 724 182 0 0 chr2 99134338 99134448 -154122135 + AluJb SINE Alu 2 111 -201 1828 128 15 0 chr2 99134450 99134715 -154121868 + MSTA LTR MaLR 1 269 -159 928 214 15 11 chr2 99134893 99135160 -154121423 + L1MC3 LINE L1 7511 7778 -7 2029 134 0 42 chr2 99135416 99135723 -154120860 - AluSx SINE Alu -18 294 1 1152 204 112 15 chr2 99135805 99136065 -154120518 + AluJo SINE Alu 1 285 -17 213 39 0 0 chr2 99136065 99136091 -154120492 + (TAGA)n Simple_repeat Simple_repeat 4 29 0 216 298 100 30 chr2 99136245 99136389 -154120194 - MIR SINE MIR -50 212 66 342 0 0 0 chr2 99136570 99136608 -154119975 + (TG)n Simple_repeat Simple_repeat 1 38 0 201 132 0 0 chr2 99136608 99136646 -154119937 + (GA)n Simple_repeat Simple_repeat 2 39 0 560 202 8 8 chr2 99137370 99137489 -154119094 - FLAM_C SINE Alu 0 143 25 225 163 265 41 chr2 99138017 99138115 -154118468 + MER5C DNA MER1_type 5 124 -200 6519 47 2 4 chr2 99139340 99140176 -154116407 - L1PA5 LINE L1 -1333 4813 3979 7181 38 0 0 chr2 99140176 99141538 -154115045 + L1PA5 LINE L1 4786 6147 -7 1430 165 0 16 chr2 99142426 99142675 -154113908 + L1PA12 LINE L1 1 245 -7336 806 152 0 0 chr2 99142673 99142811 -154113772 + L1PA12 LINE L1 3284 3421 -4163 * 7434 134 56 9 chr2 99142826 99143132 -154113451 + L1PA12 LINE L1 4287 4577 -3007 387 0 0 0 chr2 99143132 99143175 -154113408 + (CA)n Simple_repeat Simple_repeat 2 44 0 7434 134 56 9 chr2 99143175 99144215 -154112368 + L1PA12 LINE L1 4577 5697 -1887 1700 119 0 8 chr2 99144217 99144485 -154112098 - AluSc SINE Alu 0 313 48 346 277 68 39 chr2 99148292 99148454 -154108129 - MIR SINE MIR -62 146 2 1415 185 53 32 chr2 99148701 99148982 -154107601 - AluJb SINE Alu -20 292 6 208 253 108 24 chr2 99149181 99149264 -154107319 - L2 LINE L2 -2090 1224 1135 821 293 222 20 chr2 99149529 99150181 -154106402 + L2 LINE L2 2187 2970 -344 347 289 11 11 chr2 99154098 99154188 -154102395 - L1MC4 LINE L1 -1339 6703 6614 347 304 11 11 chr2 99154113 99154205 -154102378 + L1MC4 LINE L1 6612 6703 -1339 1894 198 32 92 chr2 99156875 99157442 -154099141 + MLT2B3 LTR ERVL 1 533 -21 629 191 8 16 chr2 99157628 99157754 -154098829 - MLT2B3 LTR ERVL -329 225 101 334 316 90 17 chr2 99158180 99158357 -154098226 + L3 LINE CR1 577 766 -811 745 321 46 19 chr2 99158497 99158864 -154097719 - MLT1K LTR MaLR -40 548 172 37042 83 9 9 chr2 99160081 99166222 -154090361 - L1PA6 LINE L1 0 6154 11 3947 213 39 7 chr2 99166518 99167495 -154089088 + L1MB3 LINE L1 5265 6176 -7 1403 216 256 19 chr2 99167522 99168049 -154088534 + MLT1E1 LTR MaLR 3 654 0 840 180 25 0 chr2 99168091 99168252 -154088331 + FRAM SINE Alu 1 165 -1 342 308 93 51 chr2 99168259 99168639 -154087944 + L1ME3A LINE L1 5497 5895 -275 383 305 75 11 chr2 99169158 99169332 -154087251 - MLT1K LTR MaLR -214 374 190 1340 270 58 16 chr2 99170280 99170725 -154085858 - MLT1L LTR MaLR 0 615 152 286 157 0 0 chr2 99170844 99170895 -154085688 + MLT1L LTR MaLR 344 394 -221 228 210 161 12 chr2 99170974 99171055 -154085528 + MLT1L LTR MaLR 523 615 0 247 301 29 37 chr2 99171479 99171615 -154084968 - MLT1J LTR MaLR -146 365 231 381 295 131 54 chr2 99172666 99173056 -154083527 - MLT1K LTR MaLR -15 573 154 1419 223 104 34 chr2 99173242 99173714 -154082869 + MLT1D LTR MaLR 1 505 0 1145 203 51 22 chr2 99173769 99173850 -154082733 - MER33 DNA MER1_type -2261 324 247 2117 136 7 0 chr2 99173850 99174160 -154082423 + AluSx SINE Alu 1 312 0 1145 203 51 22 chr2 99174160 99174393 -154082190 - MER33 DNA MER1_type -2338 247 1 215 216 54 27 chr2 99175642 99175716 -154080867 - MIR SINE MIR -60 202 127 494 257 80 11 chr2 99175725 99175900 -154080683 - MLT1I LTR MaLR 0 409 223 261 261 159 0 chr2 99177383 99177471 -154079112 + MIR3 SINE MIR 85 186 -22 810 276 55 55 chr2 99177666 99178087 -154078496 + LTR7 LTR ERV1 24 444 -6 992 254 68 36 chr2 99178266 99178651 -154077932 - MLT1I LTR MaLR -12 397 1 409 207 25 50 chr2 99179133 99179254 -154077329 + MIR SINE MIR 48 165 -97 361 324 17 45 chr2 99180969 99181148 -154075435 + L1ME LINE L1 5571 5746 -375 258 319 69 9 chr2 99181282 99181398 -154075185 - L2 LINE L2 0 3313 3191 204 327 10 48 chr2 99182492 99182596 -154073987 + MIR SINE MIR 113 212 -50 243 224 31 82 chr2 99182690 99182788 -154073795 - MIR SINE MIR -123 139 47 1209 160 5 3 chr2 99184425 99185369 -154071214 + (TCCA)n Simple_repeat Simple_repeat 1 1125 0 362 260 49 32 chr2 99185424 99185547 -154071036 + L2 LINE L2 3187 3311 -2 203 348 45 32 chr2 99185617 99185772 -154070811 - MIR3 SINE MIR -44 164 8 373 222 30 20 chr2 99186142 99186241 -154070342 + MIR SINE MIR 25 124 -84 285 310 152 15 chr2 99186758 99186955 -154069628 + MIR SINE MIR 2 225 -37 337 122 75 0 chr2 99187302 99187362 -154069221 - MSTB LTR MaLR -301 63 1 249 301 82 82 chr2 99187524 99187853 -154068730 + L2 LINE L2 2943 3271 -1 1135 129 21 11 chr2 99190160 99190346 -154066237 - AluSq SINE Alu -20 293 106 230 256 211 11 chr2 99190532 99190622 -154065961 + HAL1 LINE L1 1613 1720 -787 259 210 81 0 chr2 99192018 99192080 -154064503 + MER117 DNA MER1_type 53 119 -78 249 310 114 27 chr2 99192918 99193102 -154063481 - MIR SINE MIR -18 244 45 180 236 83 0 chr2 99193392 99193464 -154063119 - L2 LINE L2 -272 3000 2923 3512 189 30 37 chr2 99193506 99194139 -154062444 - L1MC1 LINE L1 -445 5888 5252 1970 108 0 46 chr2 99194139 99194444 -154062139 + AluSx SINE Alu 1 291 -21 3512 189 30 37 chr2 99194444 99195347 -154061236 - L1MC1 LINE L1 -1081 5252 4369 7084 136 21 10 chr2 99195415 99196602 -154059981 - L1MA2 LINE L1 -27 6277 5104 1538 179 11 7 chr2 99196602 99196881 -154059702 + AluSx SINE Alu 1 280 -32 555 56 0 0 chr2 99196882 99196953 -154059630 + (GGAA)n Simple_repeat Simple_repeat 2 72 0 7084 136 21 10 chr2 99196953 99197992 -154058591 - L1MA2 LINE L1 -1199 5105 4022 6669 233 19 32 chr2 99197980 99198119 -154058464 - L1MC1 LINE L1 -1748 4398 4259 * 1811 167 3 3 chr2 99198119 99198425 -154058158 - AluJb SINE Alu -6 306 1 6669 233 19 32 chr2 99198425 99199240 -154057343 - L1MC1 LINE L1 -1887 4259 3435 1691 153 11 0 chr2 99199240 99199522 -154057061 - AluJb SINE Alu -17 295 11 6669 233 19 32 chr2 99199522 99200501 -154056082 - L1MC1 LINE L1 -2711 3435 2489 272 276 69 26 chr2 99200559 99200675 -154055908 + L1MC/D LINE L1 5500 5599 -734 222 247 0 0 chr2 99200689 99200782 -154055801 + CT-rich Low_complexity Low_complexity 2 94 0 211 62 0 62 chr2 99200819 99200867 -154055716 + (TTTTTG)n Simple_repeat Simple_repeat 2 46 0 2019 139 0 0 chr2 99200890 99201200 -154055383 - AluSx SINE Alu -2 310 1 683 236 28 11 chr2 99201224 99201406 -154055177 - L1MC5 LINE L1 -1048 6913 6729 226 287 35 23 chr2 99201407 99201494 -154055089 - L1MC5 LINE L1 -1209 6752 6665 305 317 63 14 chr2 99201527 99201669 -154054914 + L1MC5 LINE L1 6961 7109 -852 457 275 44 57 chr2 99201870 99202259 -154054324 + L1MC5 LINE L1 7293 7676 -285 801 191 132 62 chr2 99202259 99202516 -154054067 + ORSL DNA AcHobo 1 275 0 516 340 42 0 chr2 99202829 99203020 -154053563 - L3 LINE CR1 -364 1213 1015 458 264 59 62 chr2 99203583 99204028 -154052555 + L1MEc LINE L1 660 1062 -5143 2079 151 68 34 chr2 99204523 99204566 -154052017 - MSTA LTR MaLR -2 426 386 2174 113 0 0 chr2 99204566 99204859 -154051724 + AluSg SINE Alu 1 293 -17 2079 151 68 34 chr2 99204859 99205227 -154051356 - MSTA LTR MaLR -42 386 1 1970 73 0 33 chr2 99205333 99205628 -154050955 - AluY SINE Alu 0 308 23 246 243 279 29 chr2 99207417 99207553 -154049030 - MER5B DNA MER1_type -5 173 4 2227 103 0 0 chr2 99207658 99207960 -154048623 + AluSx SINE Alu 1 302 -10 223 229 12 12 chr2 99208674 99208757 -154047826 + CT-rich Low_complexity Low_complexity 2 84 0 804 136 108 53 chr2 99209055 99209282 -154047301 + LTR54B LTR ERV1 1 247 -263 2027 193 28 2 chr2 99209317 99209710 -154046873 + MER57A LTR ERV1 1 403 0 1284 157 66 6 chr2 99209880 99210879 -154045704 + L1MC1 LINE L1 5184 6333 0 2559 83 8 25 chr2 99211087 99211448 -154045135 + THE1A LTR MaLR 1 355 0 12176 91 2 1 chr2 99211448 99213025 -154043558 + THE1A-int LTR MaLR 2 1580 0 2435 93 20 25 chr2 99213025 99213380 -154043203 + THE1A LTR MaLR 1 353 -2 437 219 10 10 chr2 99213630 99213726 -154042857 + MLT1K LTR MaLR 115 210 -378 359 258 42 17 chr2 99213728 99213848 -154042735 + MLT1K LTR MaLR 458 580 -8 524 276 0 92 chr2 99214388 99214453 -154042130 - MER5B DNA MER1_type -1 177 108 2185 70 0 11 chr2 99214453 99214779 -154041804 + AluY SINE Alu 1 323 0 524 276 0 92 chr2 99214779 99214884 -154041699 - MER5B DNA MER1_type -70 108 20 237 315 18 45 chr2 99214787 99214898 -154041685 + MER5A DNA MER1_type 74 181 -8 * 337 254 67 141 chr2 99215236 99215520 -154041063 + L2 LINE L2 3048 3310 -3 1791 114 38 21 chr2 99216112 99216401 -154040182 + AluSg1 SINE Alu 1 294 -15 204 245 0 0 chr2 99217259 99217308 -154039275 + (TTA)n Simple_repeat Simple_repeat 3 51 0 213 39 0 0 chr2 99217336 99217362 -154039221 + (A)n Simple_repeat Simple_repeat 1 26 0 263 191 128 53 chr2 99217474 99217568 -154039015 + LTR50 LTR ERVL 143 243 -552 372 329 62 21 chr2 99217571 99217814 -154038769 + L2 LINE L2 2551 2803 -511 1702 193 84 0 chr2 99217824 99218145 -154038438 + MLT1A1 LTR MaLR 1 348 -17 572 266 139 12 chr2 99218812 99218985 -154037598 + MIR SINE MIR 1 195 -67 752 317 44 4 chr2 99219587 99219814 -154036769 + MIR SINE MIR 8 243 -19 480 77 0 0 chr2 99219834 99219899 -154036684 + (TGG)n Simple_repeat Simple_repeat 3 67 0 295 232 64 13 chr2 99219918 99220008 -154036575 - MIR SINE MIR -63 145 68 251 337 10 0 chr2 99221204 99221302 -154035281 + MIR SINE MIR 38 136 -72 189 216 81 0 chr2 99222137 99222174 -154034409 + L2 LINE L2 3216 3255 -17 315 265 56 97 chr2 99222668 99222812 -154033771 + MIR3 SINE MIR 16 151 -57 851 169 48 48 chr2 99222812 99223001 -154033582 - MER5A DNA MER1_type 0 189 1 315 265 56 97 chr2 99223001 99223052 -154033531 + MIR3 SINE MIR 151 203 -5 1502 166 17 24 chr2 99223120 99223415 -154033168 + AluJo SINE Alu 1 293 -19 203 133 22 0 chr2 99223415 99223460 -154033123 + GA-rich Low_complexity Low_complexity 1 46 0 394 319 43 0 chr2 99224351 99224492 -154032091 + MER115 DNA AcHobo 28 174 -519 471 339 181 11 chr2 99225161 99225604 -154030979 + L3 LINE CR1 766 1283 -294 1300 261 96 31 chr2 99225679 99226219 -154030364 + L1ME4a LINE L1 5545 6119 -2 185 283 0 19 chr2 99226500 99226553 -154030030 - MIR SINE MIR -180 82 31 495 33 0 0 chr2 99227330 99227391 -154029192 + (CA)n Simple_repeat Simple_repeat 1 61 0 306 164 0 0 chr2 99227830 99227885 -154028698 + (TA)n Simple_repeat Simple_repeat 2 56 0 408 289 0 0 chr2 99227885 99227975 -154028608 + L1MC4 LINE L1 6614 6703 -1339 2316 59 0 7 chr2 99227980 99228270 -154028313 - AluY SINE Alu -21 290 3 398 268 98 0 chr2 99228398 99228510 -154028073 + MIR3 SINE MIR 78 200 -8 857 231 57 0 chr2 99228535 99228747 -154027836 + MER58A DNA MER1_type 1 224 0 266 255 75 11 chr2 99229245 99229339 -154027244 + MIR SINE MIR 16 115 -147 333 228 12 31 chr2 99229507 99229604 -154026979 + L1MC4 LINE L1 1994 6983 -1339 216 312 13 0 chr2 99229627 99229704 -154026879 + (CATA)n Simple_repeat Simple_repeat 2 79 0 183 184 0 0 chr2 99229710 99229748 -154026835 + (TA)n Simple_repeat Simple_repeat 2 39 0 183 286 0 0 chr2 99230003 99230045 -154026538 - L2 LINE L2 -6 3307 3266 2105 220 53 32 chr2 99232497 99233028 -154023555 + MLT1F LTR MaLR 1 542 0 223 332 171 13 chr2 99233083 99233243 -154023340 - MIR SINE MIR -65 197 17 188 287 62 111 chr2 99234327 99234571 -154022012 + L2 LINE L2 2991 3222 -50 1914 182 89 36 chr2 99234667 99235139 -154021444 + L1ME1 LINE L1 5665 6161 -5 2478 80 0 0 chr2 99235286 99235586 -154020997 - AluY SINE Alu -11 300 1 2632 58 0 3 chr2 99235872 99236183 -154020400 + AluY SINE Alu 1 310 -1 333 325 97 19 chr2 99236505 99236659 -154019924 - L3 LINE CR1 -25 1552 1387 432 55 0 0 chr2 99236663 99236718 -154019865 + (ATG)n Simple_repeat Simple_repeat 2 56 0 974 247 31 18 chr2 99236741 99236968 -154019615 - MIR SINE MIR -4 258 29 534 341 71 29 chr2 99237007 99237318 -154019265 - L3 LINE CR1 -221 1356 1033 288 294 32 24 chr2 99237868 99237994 -154018589 - MIR SINE MIR -44 218 92 190 273 199 37 chr2 99238778 99238939 -154017644 - L2 LINE L2 -673 2641 2455 396 0 0 0 chr2 99239371 99239415 -154017168 + (TG)n Simple_repeat Simple_repeat 1 44 0 460 291 55 16 chr2 99240533 99240715 -154015868 - MIR SINE MIR -24 238 50 905 307 32 34 chr2 99240863 99241482 -154015101 + L1M4 LINE L1 4786 5403 -743 2203 125 0 7 chr2 99241702 99242006 -154014577 + AluSq SINE Alu 1 302 -11 198 327 106 0 chr2 99242215 99242319 -154014264 + L2 LINE L2 3191 3305 -8 319 318 80 7 chr2 99243180 99243331 -154013252 - MIR SINE MIR -9 253 92 269 254 0 0 chr2 99243639 99243694 -154012889 + CT-rich Low_complexity Low_complexity 3 57 0 276 271 29 0 chr2 99243694 99243764 -154012819 - L2 LINE L2 -15 3257 3186 366 333 144 44 chr2 99246403 99246763 -154009820 + L3 LINE CR1 1179 1574 -3 480 291 37 98 chr2 99247414 99247741 -154008842 + L2 LINE L2 2935 3241 -31 286 221 23 35 chr2 99247741 99247827 -154008756 + GA-rich Low_complexity Low_complexity 3 87 0 2875 3 0 22 chr2 99250413 99250730 -154005853 + AluYa5 SINE Alu 1 310 -1 195 39 0 0 chr2 99251150 99251176 -154005407 + MIR SINE MIR 114 139 -123 556 314 25 0 chr2 99251189 99251348 -154005235 - MIR SINE MIR -6 256 94 456 252 67 0 chr2 99251701 99251820 -154004763 + MIR SINE MIR 125 251 -11 207 204 0 0 chr2 99252214 99252258 -154004325 + (CA)n Simple_repeat Simple_repeat 1 44 0 441 277 0 0 chr2 99252986 99253080 -154003503 + L2 LINE L2 3220 3313 0 195 133 0 89 chr2 99255172 99255217 -154001366 - L3 LINE CR1 -266 1311 1271 198 71 0 0 chr2 99255526 99255554 -154001029 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 351 325 95 8 chr2 99255692 99255818 -154000765 + MER5A DNA MER1_type 53 189 0 396 346 34 17 chr2 99255952 99256131 -154000452 - MIR SINE MIR -59 203 22 195 189 0 0 chr2 99256590 99256643 -153999940 + GA-rich Low_complexity Low_complexity 1 53 0 587 146 10 0 chr2 99256644 99256740 -153999843 - Charlie1 DNA MER1_type -584 2177 2081 357 285 117 0 chr2 99256745 99256882 -153999701 - Charlie1 DNA MER1_type -2608 153 1 199 365 87 10 chr2 99256884 99256988 -153999595 + MIR3 SINE MIR 9 120 -88 387 302 9 26 chr2 99257316 99257432 -153999151 + L2 LINE L2 3142 3255 -17 1879 182 52 21 chr2 99259823 99260207 -153996376 + MSTD LTR MaLR 1 396 0 2220 105 7 0 chr2 99260235 99260529 -153996054 + AluY SINE Alu 1 296 -15 253 251 51 64 chr2 99260557 99260792 -153995791 + L1ME4a LINE L1 5713 5944 -177 293 298 4 59 chr2 99261890 99262226 -153994357 + GA-rich Low_complexity Low_complexity 1 317 0 531 0 0 0 chr2 99262496 99262555 -153994028 + (TG)n Simple_repeat Simple_repeat 1 59 0 384 269 59 17 chr2 99262603 99262722 -153993861 + MIR SINE MIR 84 207 -55 284 208 143 0 chr2 99263264 99263341 -153993242 + L2 LINE L2 3189 3276 -37 307 307 233 7 chr2 99263379 99263529 -153993054 - MIR SINE MIR -59 203 20 461 263 73 20 chr2 99263931 99264124 -153992459 + MIR SINE MIR 16 212 -50 538 281 47 59 chr2 99264321 99264574 -153992009 + MIR SINE MIR 1 250 -12 214 341 59 0 chr2 99265154 99265239 -153991344 - L2 LINE L2 -37 3235 3146 22 0 0 0 chr2 99265455 99265477 -153991106 + AT_rich Low_complexity Low_complexity 1 22 0 212 295 16 0 chr2 99265791 99265852 -153990731 + L2 LINE L2 2999 3060 -212 193 200 0 0 chr2 99266062 99266097 -153990486 + L2 LINE L2 3265 3299 -14 288 250 14 14 chr2 99266097 99266237 -153990346 + GA-rich Low_complexity Low_complexity 4 143 0 193 269 186 41 chr2 99267208 99267353 -153989230 - L2 LINE L2 0 3313 3148 191 275 0 0 chr2 99267389 99267429 -153989154 - L3 LINE CR1 -12 1565 1526 505 196 21 0 chr2 99267631 99267728 -153988855 + MIR3 SINE MIR 109 207 -1 620 267 73 30 chr2 99268348 99268580 -153988003 - MIR SINE MIR -4 258 17 216 268 14 14 chr2 99268790 99268928 -153987655 + GA-rich Low_complexity Low_complexity 4 141 0 757 174 0 8 chr2 99269446 99269567 -153987016 + FLAM_A SINE Alu 8 127 -15 322 298 53 9 chr2 99270101 99270215 -153986368 + MIR SINE MIR 19 137 -125 406 325 51 69 chr2 99270283 99270618 -153985965 + L2 LINE L2 2897 3225 -47 257 230 27 14 chr2 99271086 99271160 -153985423 + CT-rich Low_complexity Low_complexity 4 78 0 196 311 33 0 chr2 99272850 99272911 -153983672 - L3b LINE CR1 -115 1468 1406 392 307 13 24 chr2 99273126 99273290 -153983293 + MIR SINE MIR 24 186 -67 700 266 158 4 chr2 99273919 99274197 -153982386 + LTR16A LTR ERVL 93 413 -37 433 253 0 0 chr2 99274197 99274292 -153982291 - MIR SINE MIR -130 132 38 354 254 51 34 chr2 99274606 99274724 -153981859 + MIR SINE MIR 84 203 -59 479 337 17 11 chr2 99274945 99275120 -153981463 + MIR3 SINE MIR 31 206 -2 260 214 204 0 chr2 99276357 99276455 -153980128 + MER117 DNA MER1_type 2 119 -78 275 280 153 0 chr2 99277288 99277406 -153979177 - MIR3 SINE MIR -9 199 64 301 294 164 79 chr2 99277918 99278210 -153978373 - L3 LINE CR1 -103 1474 1158 185 357 14 14 chr2 99278587 99278657 -153977926 + MIR3 SINE MIR 130 199 -9 213 217 0 72 chr2 99279072 99279141 -153977442 + MIR3 SINE MIR 96 159 -49 209 304 38 25 chr2 99279118 99279197 -153977386 + MER5A DNA MER1_type 11 90 -99 * 221 237 34 0 chr2 99279309 99279368 -153977215 + MER5B DNA MER1_type 4 64 -114 681 217 15 3 chr2 99279368 99279525 -153977058 + L1ME1 LINE L1 6017 6178 0 354 222 222 0 chr2 99279706 99279796 -153976787 + MER5B DNA MER1_type 68 177 -1 531 248 17 9 chr2 99280345 99280479 -153976104 - MIR SINE MIR -54 154 20 236 301 75 30 chr2 99281535 99281668 -153974915 - MIR3 SINE MIR -12 196 58 353 255 131 20 chr2 99283812 99283965 -153972618 + MIR SINE MIR 81 250 -12 1145 184 77 101 chr2 99285559 99285924 -153970659 - MLT1A1 LTR MaLR -6 359 4 183 42 0 0 chr2 99286212 99286236 -153970347 + (TG)n Simple_repeat Simple_repeat 2 25 0 1512 241 82 27 chr2 99286762 99287201 -153969382 + MLT1C LTR MaLR 3 465 -2 189 0 0 0 chr2 99287329 99287350 -153969233 + (GA)n Simple_repeat Simple_repeat 2 22 0 361 104 0 65 chr2 99287664 99287734 -153968849 - MLT2B1 LTR ERVL 0 515 455 2137 174 108 25 chr2 99287818 99288254 -153968329 - MLT2B1 LTR ERVL -48 472 1 241 299 69 0 chr2 99288834 99288921 -153967662 - MIR3 SINE MIR -6 202 110 441 0 0 0 chr2 99288975 99289024 -153967559 + (TG)n Simple_repeat Simple_repeat 2 50 0 2244 214 34 61 chr2 99289919 99290475 -153966108 - MLT1F LTR MaLR -1 541 1 903 230 6 0 chr2 99290555 99290729 -153965854 - MER5A DNA MER1_type -2 187 13 189 235 0 39 chr2 99290787 99290838 -153965745 + MER5B DNA MER1_type 1 49 -129 2970 62 8 8 chr2 99290981 99291351 -153965232 + L1PB1 LINE L1 5773 6142 -9 465 365 97 17 chr2 99291379 99291842 -153964741 - L3 LINE CR1 -130 1447 948 360 164 0 0 chr2 99292214 99292281 -153964302 + GA-rich Low_complexity Low_complexity 2 68 0 258 267 33 11 chr2 99292934 99293024 -153963559 - L2 LINE L2 -22 3291 3200 419 307 45 28 chr2 99293477 99293653 -153962930 + MIR SINE MIR 21 199 -63 200 374 96 36 chr2 99294241 99294460 -153962123 - L2 LINE L2 0 3272 3041 232 366 9 17 chr2 99294805 99294935 -153961648 + MIR SINE MIR 13 141 -67 301 320 53 47 chr2 99295040 99295190 -153961393 + L2 LINE L2 3102 3252 -20 523 271 114 14 chr2 99296043 99296253 -153960330 - MIR SINE MIR -4 258 28 1543 167 50 25 chr2 99296841 99296957 -153959626 + AluJo SINE Alu 3 115 -197 216 0 0 0 chr2 99296957 99296981 -153959602 + (TAAAA)n Simple_repeat Simple_repeat 1 24 0 1543 167 50 25 chr2 99296981 99297145 -153959438 + AluJo SINE Alu 115 290 -22 214 244 0 0 chr2 99298220 99298261 -153958322 + L2 LINE L2 3181 3221 -51 980 283 26 13 chr2 99298330 99298637 -153957946 - L2 LINE L2 -13 3300 2990 236 347 75 61 chr2 99298933 99299227 -153957356 + L2 LINE L2 2560 2862 -452 318 87 0 0 chr2 99299227 99299273 -153957310 + (CA)n Simple_repeat Simple_repeat 2 47 0 236 347 75 61 chr2 99299273 99299353 -153957230 + L2 LINE L2 2862 2939 -375 319 295 42 0 chr2 99299566 99299661 -153956922 + L2 LINE L2 3202 3300 -13 203 159 29 87 chr2 99299888 99299957 -153956626 - MIR3 SINE MIR -137 71 7 277 128 128 0 chr2 99300469 99300516 -153956067 - AluSg/x SINE Alu -49 251 199 511 286 151 5 chr2 99300977 99301176 -153955407 - MIR SINE MIR -7 255 28 298 323 189 15 chr2 99301818 99302019 -153954564 + MIR SINE MIR 14 249 -13 977 195 29 15 chr2 99303049 99303254 -153953329 + L1PA16 LINE L1 5833 6040 -126 303 302 168 51 chr2 99303254 99303648 -153952935 + L1M2 LINE L1 598 1037 -5812 365 150 50 0 chr2 99305952 99306012 -153950571 + L1PA16 LINE L1 6021 6083 -83 221 0 0 33 chr2 99306162 99306192 -153950391 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1338 178 12 19 chr2 99306194 99306453 -153950130 - AluJb SINE Alu -27 285 29 221 83 28 0 chr2 99306454 99306490 -153950093 + (TA)n Simple_repeat Simple_repeat 1 37 0 252 141 0 78 chr2 99306563 99306627 -153949956 - L1MC4 LINE L1 -1336 6706 6648 1763 192 6 34 chr2 99307138 99307487 -153949096 - MER2 DNA MER2_type 0 345 7 27 0 0 0 chr2 99311881 99311908 -153944675 + AT_rich Low_complexity Low_complexity 1 27 0 237 198 31 0 chr2 99312876 99312972 -153943611 + (TA)n Simple_repeat Simple_repeat 2 100 0 1593 174 4 0 chr2 99313014 99313279 -153943304 - AluSx SINE Alu -46 266 1 263 127 0 36 chr2 99314785 99314840 -153941743 + (CATATA)n Simple_repeat Simple_repeat 3 55 0 2013 153 0 6 chr2 99315162 99315476 -153941107 - AluSx SINE Alu 0 312 1 796 269 76 11 chr2 99316107 99316371 -153940212 + MLT2B1 LTR ERVL 184 464 -56 1610 119 0 0 chr2 99316372 99316590 -153939993 + AluSq SINE Alu 51 268 -45 260 212 15 0 chr2 99316597 99316663 -153939920 + CT-rich Low_complexity Low_complexity 2 68 0 29 60 0 0 chr2 99316711 99316761 -153939822 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr2 99317025 99317046 -153939537 + AT_rich Low_complexity Low_complexity 1 21 0 219 278 14 14 chr2 99318054 99318126 -153938457 + GA-rich Low_complexity Low_complexity 2 73 0 26 0 0 0 chr2 99320354 99320380 -153936203 + AT_rich Low_complexity Low_complexity 1 26 0 30 45 0 0 chr2 99320937 99320981 -153935602 + AT_rich Low_complexity Low_complexity 1 44 0 22 35 0 0 chr2 99321081 99321110 -153935473 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr2 99321148 99321173 -153935410 + AT_rich Low_complexity Low_complexity 1 25 0 1219 248 74 61 chr2 99321519 99321963 -153934620 + MLT1C LTR MaLR 17 466 -1 826 170 7 22 chr2 99322063 99322198 -153934385 + FLAM_C SINE Alu 1 133 0 1619 153 35 31 chr2 99322228 99322516 -153934067 + AluJo SINE Alu 1 289 -23 53 49 0 0 chr2 99322720 99322801 -153933782 + AT_rich Low_complexity Low_complexity 1 81 0 235 221 35 18 chr2 99322849 99322962 -153933621 + HAL1 LINE L1 1009 1123 -1384 1932 128 3 0 chr2 99323520 99323826 -153932757 - AluSx SINE Alu 0 307 1 479 196 0 0 chr2 99324296 99324393 -153932190 - L1MA6 LINE L1 0 6300 6204 21 71 0 0 chr2 99324692 99324734 -153931849 + AT_rich Low_complexity Low_complexity 1 42 0 196 296 0 0 chr2 99324896 99324940 -153931643 + MER5A DNA MER1_type 140 183 -6 1568 205 3 22 chr2 99325069 99325381 -153931202 - AluJo SINE Alu -6 306 1 1818 129 3 18 chr2 99326750 99327065 -153929518 - AluSx SINE Alu 0 311 1 1032 231 176 19 chr2 99328899 99329324 -153927259 + LTR54B LTR ERV1 1 492 -6 432 0 0 0 chr2 99329384 99329432 -153927151 + (CA)n Simple_repeat Simple_repeat 2 49 0 1449 181 4 0 chr2 99329727 99329998 -153926585 - AluSx SINE Alu 0 310 39 634 255 0 21 chr2 99331164 99331353 -153925230 + FLAM_C SINE Alu 2 187 0 1490 211 24 13 chr2 99332440 99332738 -153923845 - AluJo SINE Alu -11 301 1 32 0 0 0 chr2 99332984 99333016 -153923567 + AT_rich Low_complexity Low_complexity 1 32 0 715 249 90 40 chr2 99333067 99333344 -153923239 + pTR5 LTR ERV1 738 1028 -1410 3516 124 268 17 chr2 99333531 99334191 -153922392 + LTR12 LTR ERV1 1 826 0 231 256 0 70 chr2 99334348 99334434 -153922149 + MIR SINE MIR 172 251 -11 2065 194 55 40 chr2 99334501 99334976 -153921607 - MER66B LTR ERV1 -2 484 3 591 235 0 0 chr2 99335315 99335430 -153921153 + FLAM_A SINE Alu 1 115 -18 21 36 0 0 chr2 99335726 99335754 -153920829 + AT_rich Low_complexity Low_complexity 1 28 0 1635 187 40 42 chr2 99335873 99336253 -153920330 - LTR1 LTR ERV1 -165 620 242 252 214 0 0 chr2 99336339 99336395 -153920188 + (TATATG)n Simple_repeat Simple_repeat 3 58 0 323 366 52 54 chr2 99338230 99338430 -153918153 + L2 LINE L2 2793 2990 -323 441 36 0 0 chr2 99338430 99338485 -153918098 + (CA)n Simple_repeat Simple_repeat 1 55 0 323 366 52 54 chr2 99338485 99338600 -153917983 + L2 LINE L2 2990 3104 -209 315 353 13 32 chr2 99339072 99339228 -153917355 + L2 LINE L2 753 905 -2409 336 174 114 66 chr2 99339350 99339380 -153917203 + Charlie5 DNA MER1_type 2405 2432 -192 1265 219 20 10 chr2 99339380 99339682 -153916901 + AluJb SINE Alu 1 305 -7 336 174 114 66 chr2 99339682 99339818 -153916765 + Charlie5 DNA MER1_type 2432 2579 -45 2480 109 0 0 chr2 99339823 99340182 -153916401 + L1PA13 LINE L1 5801 6159 -4 494 277 96 45 chr2 99340283 99340492 -153916091 + L1M4 LINE L1 2962 3159 -2987 2196 122 0 0 chr2 99340492 99340787 -153915796 - AluSx SINE Alu -13 299 5 494 277 96 45 chr2 99340787 99341215 -153915368 + L1M4 LINE L1 3159 3631 -2515 721 256 0 6 chr2 99341226 99341402 -153915181 - FRAM SINE Alu -2 174 1 566 300 88 20 chr2 99341440 99341896 -153914687 + L1M4 LINE L1 3680 4166 -1980 327 104 0 0 chr2 99342083 99342131 -153914452 + (CA)n Simple_repeat Simple_repeat 1 48 0 286 333 13 0 chr2 99342241 99342319 -153914264 - MIR SINE MIR -181 81 3 410 270 19 44 chr2 99343942 99344101 -153912482 + MLT1G3 LTR MaLR 137 291 -239 230 54 0 27 chr2 99344240 99344277 -153912306 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 696 207 35 0 chr2 99344517 99344662 -153911921 + Tigger3(Golem) DNA MER2_type 2879 3028 -1 203 240 0 0 chr2 99347198 99347248 -153909335 + (CA)n Simple_repeat Simple_repeat 1 50 0 1812 154 0 29 chr2 99347428 99347734 -153908849 + AluSx SINE Alu 5 301 -11 268 286 51 31 chr2 99350073 99350171 -153906412 + L2 LINE L2 3181 3280 -33 2036 92 0 51 chr2 99351495 99351810 -153904773 + AluY SINE Alu 1 299 -12 437 216 32 56 chr2 99351880 99352005 -153904578 + FLAM_C SINE Alu 1 122 -21 22 0 0 0 chr2 99352008 99352030 -153904553 + AT_rich Low_complexity Low_complexity 1 22 0 1925 121 7 14 chr2 99352030 99352341 -153904242 + AluSc SINE Alu 1 309 0 262 148 0 33 chr2 99354071 99354132 -153902451 + (TA)n Simple_repeat Simple_repeat 1 59 0 1273 117 80 0 chr2 99354184 99354397 -153902186 + MER30 DNA MER1_type 1 230 0 511 192 142 33 chr2 99354802 99354922 -153901661 - AluSq/x SINE Alu -180 133 1 221 298 39 87 chr2 99355949 99356053 -153900530 + L2 LINE L2 3142 3240 -32 1449 190 68 0 chr2 99356823 99357102 -153899481 + AluSg SINE Alu 1 298 -12 225 217 43 0 chr2 99357102 99357148 -153899435 + polypurine Low_complexity Low_complexity 1 48 0 725 239 0 13 chr2 99358681 99358836 -153897747 - AluJo SINE Alu -39 273 121 211 196 39 0 chr2 99358986 99359037 -153897546 + (TA)n Simple_repeat Simple_repeat 1 53 0 315 294 42 87 chr2 99359138 99359427 -153897156 + L1MEd LINE L1 1224 1499 -4873 327 304 50 50 chr2 99359557 99359718 -153896865 + L1MEd LINE L1 1449 1609 -4775 775 284 112 76 chr2 99359854 99360409 -153896174 - L1MCc LINE L1 -4997 1426 846 1839 122 51 24 chr2 99360409 99360705 -153895878 - AluY SINE Alu -7 304 1 775 284 112 76 chr2 99360705 99360757 -153895826 - L1MCc LINE L1 -5577 846 797 2761 91 5 13 chr2 99360934 99361328 -153895255 + L1PA7 LINE L1 5760 6150 -4 22 35 0 0 chr2 99361450 99361479 -153895104 + AT_rich Low_complexity Low_complexity 1 29 0 424 284 87 38 chr2 99361561 99361850 -153894733 - L1ME3A LINE L1 -164 6006 5704 6622 49 19 0 chr2 99362004 99362842 -153893741 - L1PA4 LINE L1 -1 6154 5301 361 275 123 20 chr2 99362889 99363352 -153893231 - L1ME3A LINE L1 -725 5437 4915 224 340 82 10 chr2 99364919 99365016 -153891567 + L2 LINE L2 3201 3304 -9 2260 65 0 17 chr2 99365177 99365471 -153891112 + AluY SINE Alu 1 289 -22 21 71 0 0 chr2 99365825 99365867 -153890716 + AT_rich Low_complexity Low_complexity 1 42 0 1866 182 46 55 chr2 99365886 99366321 -153890262 + Tigger2a DNA MER2_type 3 433 -1 1882 133 3 30 chr2 99366978 99367108 -153889475 + AluSx SINE Alu 2 134 -178 186 43 0 0 chr2 99367108 99367131 -153889452 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1882 133 3 30 chr2 99367131 99367300 -153889283 + AluSx SINE Alu 134 293 -19 228 35 0 0 chr2 99367961 99367990 -153888593 + (TG)n Simple_repeat Simple_repeat 1 29 0 461 287 38 13 chr2 99368297 99368454 -153888129 + MIR SINE MIR 83 243 -19 193 333 37 0 chr2 99368669 99368723 -153887860 + L2 LINE L2 3132 3187 -85 254 158 0 0 chr2 99369155 99369193 -153887390 + Tigger2 DNA MER2_type 10 47 -2671 2458 63 7 7 chr2 99369200 99369503 -153887080 - AluSp SINE Alu -8 305 3 815 161 7 14 chr2 99369595 99369738 -153886845 + FRAM SINE Alu 22 163 -13 204 40 0 0 chr2 99370114 99370139 -153886444 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 416 279 77 0 chr2 99370532 99370636 -153885947 - MER8 DNA MER2_type -117 122 11 237 249 79 23 chr2 99370997 99371174 -153885409 - L1ME4a LINE L1 0 6121 5935 31 26 0 0 chr2 99371198 99371236 -153885347 + AT_rich Low_complexity Low_complexity 1 38 0 1524 193 0 11 chr2 99371515 99371800 -153884783 - AluJo SINE Alu -30 282 1 258 229 35 139 chr2 99372075 99372219 -153884364 + MIR SINE MIR 71 199 -63 1870 137 0 14 chr2 99372311 99372637 -153883946 - AluSg SINE Alu 0 322 1 26 30 0 0 chr2 99373164 99373197 -153883386 + AT_rich Low_complexity Low_complexity 1 33 0 22 56 0 0 chr2 99373503 99373539 -153883044 + AT_rich Low_complexity Low_complexity 1 36 0 249 83 0 0 chr2 99373858 99373894 -153882689 + (TAGA)n Simple_repeat Simple_repeat 1 36 0 380 256 24 90 chr2 99373921 99374132 -153882451 - LTR41 LTR ERVL -7 766 570 276 333 31 10 chr2 99374995 99375091 -153881492 + MIR3 SINE MIR 75 172 -36 286 397 7 0 chr2 99375805 99375941 -153880642 - LTR41 LTR ERVL -255 518 382 536 205 43 8 chr2 99376126 99376243 -153880340 - LTR41 LTR ERVL -622 151 31 21 0 0 0 chr2 99376272 99376293 -153880290 + AT_rich Low_complexity Low_complexity 1 21 0 1573 164 34 27 chr2 99376799 99377091 -153879492 - AluSx SINE Alu -16 296 3 199 283 0 38 chr2 99377153 99377206 -153879377 + L2 LINE L2 2997 3047 -225 317 83 0 111 chr2 99377280 99377352 -153879231 - L1PA8 LINE L1 0 6172 6109 786 301 21 8 chr2 99377755 99377991 -153878592 + MIR SINE MIR 21 259 -3 1722 38 0 5 chr2 99378025 99378235 -153878348 - L1PA5 LINE L1 -8 6146 5938 2152 124 0 0 chr2 99379004 99379294 -153877289 + AluSx SINE Alu 1 290 -22 32 57 0 0 chr2 99379295 99379348 -153877235 + AT_rich Low_complexity Low_complexity 1 53 0 2170 119 0 0 chr2 99379730 99380025 -153876558 + AluSx SINE Alu 5 299 -13 2052 126 0 7 chr2 99380072 99380374 -153876209 - AluSg SINE Alu -10 300 1 1967 143 3 10 chr2 99381164 99381465 -153875118 + AluSx SINE Alu 1 299 -13 960 240 51 71 chr2 99381935 99382041 -153874542 - MER2 DNA MER2_type 0 344 237 1973 124 0 11 chr2 99382041 99382323 -153874260 - AluY SINE Alu -32 279 1 960 240 51 71 chr2 99382323 99382566 -153874017 - MER2 DNA MER2_type -107 237 2 610 239 108 15 chr2 99388267 99388535 -153868048 - L1MB7 LINE L1 -13 6171 5879 771 255 106 14 chr2 99390934 99391303 -153865280 + L1MA9 LINE L1 5872 6274 -38 1710 178 3 24 chr2 99391458 99391751 -153864832 + AluJo SINE Alu 1 287 -25 1686 178 0 0 chr2 99392310 99392591 -153863992 + AluSx SINE Alu 24 304 0 517 271 7 0 chr2 99393811 99393955 -153862628 - MER5A DNA MER1_type -40 149 5 330 267 126 86 chr2 99394720 99394975 -153861608 + L1M2 LINE L1 679 943 -5906 2351 68 3 7 chr2 99395404 99395699 -153860884 + AluSp SINE Alu 1 294 -19 1766 148 16 35 chr2 99400200 99400595 -153855988 + AluSx SINE Alu 1 389 0 744 94 0 0 chr2 99401872 99401978 -153854605 + (TA)n Simple_repeat Simple_repeat 1 106 0 1285 161 31 0 chr2 99402021 99402244 -153854339 + MER30 DNA MER1_type 1 230 0 21 0 0 0 chr2 99402262 99402283 -153854300 + AT_rich Low_complexity Low_complexity 1 21 0 534 223 0 27 chr2 99402669 99402781 -153853802 - FLAM_C SINE Alu -32 111 3 1392 194 79 0 chr2 99404683 99404962 -153851621 + AluSg SINE Alu 1 301 -9 406 177 10 10 chr2 99404963 99405059 -153851524 + GA-rich Low_complexity Low_complexity 1 96 0 466 178 0 0 chr2 99406567 99406640 -153849943 - AluJo/FRAM SINE Alu -39 273 201 228 250 0 0 chr2 99406643 99406687 -153849896 - AluJ/monomer SINE Alu -89 44 1 227 176 39 0 chr2 99406840 99406891 -153849692 + (TA)n Simple_repeat Simple_repeat 2 54 0 23 33 0 0 chr2 99406923 99406953 -153849630 + AT_rich Low_complexity Low_complexity 1 30 0 830 272 141 61 chr2 99407699 99408258 -153848325 - L1MCc LINE L1 -4997 1426 823 2995 58 2 8 chr2 99408462 99408856 -153847727 + L1PA7 LINE L1 5760 6151 -3 26 0 0 0 chr2 99408888 99408914 -153847669 + AT_rich Low_complexity Low_complexity 1 26 0 28 0 0 0 chr2 99408974 99409002 -153847581 + AT_rich Low_complexity Low_complexity 1 28 0 412 326 103 19 chr2 99409095 99409745 -153846838 - L1ME3A LINE L1 -168 5994 5290 22 0 0 0 chr2 99411140 99411162 -153845421 + AT_rich Low_complexity Low_complexity 1 22 0 1934 179 121 6 chr2 99411208 99411715 -153844868 - SATR1 Satellite Satellite -398 565 1 590 185 133 52 chr2 99411825 99411998 -153844585 - SATR1 Satellite Satellite -94 376 190 1224 201 236 17 chr2 99412040 99413186 -153843397 - SATR1 Satellite Satellite -51 1397 1 1447 127 27 14 chr2 99413188 99413409 -153843174 - AluSq SINE Alu -89 224 1 720 215 77 0 chr2 99415311 99415506 -153841077 + MER6B DNA MER2_type 1 210 0 399 235 76 25 chr2 99415609 99415728 -153840855 - MER5B DNA MER1_type -4 174 50 216 0 0 0 chr2 99415728 99415752 -153840831 + (T)n Simple_repeat Simple_repeat 1 24 0 181 133 0 0 chr2 99415752 99415782 -153840801 + MER5B DNA MER1_type 125 154 -24 2251 100 0 52 chr2 99415937 99416267 -153840316 - AluSp SINE Alu 0 313 1 276 236 96 45 chr2 99416267 99416415 -153840168 - HsTC2 DNA Tc2 -107 1791 1633 1275 215 2 69 chr2 99416456 99416636 -153839947 + L1MA4 LINE L1 5770 5910 -390 1819 153 0 4 chr2 99416636 99416917 -153839666 + AluSx SINE Alu 1 280 -32 1275 215 2 69 chr2 99416917 99417141 -153839442 + L1MA4 LINE L1 5910 6147 -153 1905 142 14 3 chr2 99417201 99417497 -153839086 - AluSp SINE Alu -4 309 11 2068 161 101 11 chr2 99417498 99418541 -153838042 - SATR1 Satellite Satellite 0 1137 1 718 189 0 44 chr2 99418721 99418901 -153837682 + LTR2 LTR ERV1 266 437 -12 488 122 0 0 chr2 99418917 99418991 -153837592 - tRNA-Glu-GAG tRNA tRNA 0 75 2 2871 121 7 0 chr2 99418992 99419439 -153837144 + HERVE LTR ERV1 647 1096 -6717 300 250 46 19 chr2 99419668 99419776 -153836807 - HAL1 LINE L1 -1384 1123 1013 1537 193 21 7 chr2 99419822 99420133 -153836450 - AluJo SINE Alu 0 315 1 686 185 31 8 chr2 99420168 99420298 -153836285 - FLAM_C SINE Alu 0 133 1 1098 234 100 61 chr2 99420394 99420834 -153835749 - MLT1C LTR MaLR -2 465 9 250 261 9 18 chr2 99421165 99421276 -153835307 + T-rich Low_complexity Low_complexity 3 112 0 21 36 0 0 chr2 99421311 99421339 -153835244 + AT_rich Low_complexity Low_complexity 1 28 0 1756 173 7 11 chr2 99421805 99422112 -153834471 - AluSx SINE Alu 0 307 2 23 0 0 0 chr2 99422122 99422145 -153834438 + AT_rich Low_complexity Low_complexity 1 23 0 334 159 56 75 chr2 99423088 99423195 -153833388 - MLT2B1 LTR ERVL -311 209 105 288 313 176 14 chr2 99423910 99424188 -153832395 + L2 LINE L2 2068 2390 -924 22 56 0 0 chr2 99424452 99424488 -153832095 + AT_rich Low_complexity Low_complexity 1 36 0 2323 62 0 32 chr2 99425079 99425388 -153831195 - AluY SINE Alu -12 299 1 229 254 0 17 chr2 99425938 99425997 -153830586 + (TA)n Simple_repeat Simple_repeat 1 58 0 418 277 42 5 chr2 99426294 99426527 -153830056 - L1MCa LINE L1 -3654 2772 2532 354 254 56 78 chr2 99426540 99426682 -153829901 - L1MCa LINE L1 -4519 1907 1769 2512 232 36 64 chr2 99426706 99427859 -153828724 - L1MCa LINE L1 -2515 3911 2792 775 269 22 112 chr2 99427863 99428535 -153828048 - L1MCa LINE L1 -5750 857 246 1266 199 146 15 chr2 99429022 99429289 -153827294 - AluJb SINE Alu 0 302 1 24 0 0 0 chr2 99430120 99430144 -153826439 + AT_rich Low_complexity Low_complexity 1 24 0 275 366 9 18 chr2 99431643 99431755 -153824828 + L2 LINE L2 3142 3252 -20 3978 167 18 16 chr2 99432294 99433089 -153823494 + L1PA15 LINE L1 5352 6147 -18 34 42 0 0 chr2 99434377 99434425 -153822158 + AT_rich Low_complexity Low_complexity 1 48 0 3586 204 29 66 chr2 99434653 99435659 -153820924 + LTR5 LTR ERVK 1 969 0 22 0 0 0 chr2 99436721 99436743 -153819840 + AT_rich Low_complexity Low_complexity 1 22 0 1583 202 40 12 chr2 99436786 99437315 -153819268 + LTR26 LTR ERV1 1 603 0 624 251 26 26 chr2 99437315 99437509 -153819074 + MER115 DNA AcHobo 500 693 0 4751 96 3 6 chr2 99437513 99438188 -153818395 + L1PA8 LINE L1 5487 6159 -13 864 210 15 15 chr2 99438970 99439165 -153817418 + Tigger7 DNA MER2_type 575 769 -1718 606 144 0 0 chr2 99439166 99439263 -153817320 + Tigger7 DNA MER2_type 2118 2214 -273 1097 229 16 25 chr2 99439508 99439752 -153816831 + AluJo SINE Alu 13 254 -58 338 86 17 35 chr2 99440955 99441013 -153815570 - MLT2B1 LTR ERVL 0 520 464 240 71 0 0 chr2 99441036 99441078 -153815505 - LTR66 LTR ERVL -175 435 394 1233 170 18 0 chr2 99441104 99441322 -153815261 + Tigger3(Golem) DNA MER2_type 2806 3027 -2 374 265 22 0 chr2 99441322 99441452 -153815131 - MLT2B3 LTR ERVL -46 508 381 * 1072 177 38 42 chr2 99441443 99441680 -153814903 - MLT2B3 LTR ERVL -314 240 5 230 170 128 43 chr2 99443989 99444083 -153812500 - L1MC4 LINE L1 -1341 6701 6600 205 140 0 40 chr2 99444083 99444133 -153812450 + (TA)n Simple_repeat Simple_repeat 2 49 0 216 375 42 17 chr2 99444133 99444253 -153812330 - L2 LINE L2 -341 2973 2851 21 0 0 0 chr2 99446074 99446095 -153810488 + AT_rich Low_complexity Low_complexity 1 21 0 436 285 160 30 chr2 99448831 99449341 -153807242 + L1ME3A LINE L1 4915 5357 -813 6855 38 9 1 chr2 99449341 99450185 -153806398 + L1PA4 LINE L1 5305 6155 0 436 285 160 30 chr2 99450185 99450632 -153805951 + L1ME3A LINE L1 5357 6006 -164 2781 89 5 13 chr2 99450861 99451255 -153805328 - L1PA7 LINE L1 -4 6150 5760 719 286 131 71 chr2 99451433 99451485 -153805098 + L1MCc LINE L1 797 844 -5579 1987 94 50 30 chr2 99451485 99451783 -153804800 + AluY SINE Alu 1 304 -7 719 286 131 71 chr2 99451783 99452324 -153804259 + L1MCc LINE L1 844 1426 -4997 328 300 56 50 chr2 99452460 99452620 -153803963 - L1MEd LINE L1 -4775 1609 1449 413 279 41 86 chr2 99452749 99453039 -153803544 - L1MEd LINE L1 -4872 1500 1224 30 0 0 0 chr2 99453080 99453110 -153803473 + AT_rich Low_complexity Low_complexity 1 30 0 725 239 0 13 chr2 99453341 99453496 -153803087 + AluJo SINE Alu 121 273 -39 203 189 0 0 chr2 99453640 99453677 -153802906 + A-rich Low_complexity Low_complexity 1 37 0 225 217 43 0 chr2 99455027 99455073 -153801510 + polypyrimidine Low_complexity Low_complexity 1 48 0 1464 183 68 0 chr2 99455073 99455352 -153801231 - AluSg SINE Alu -12 298 1 9375 100 31 20 chr2 99506005 99506964 -153749619 + Tigger1 DNA MER2_type 764 1745 -673 2466 62 0 0 chr2 99506964 99507270 -153749313 + AluSq SINE Alu 1 306 -7 9375 100 31 20 chr2 99507270 99507705 -153748878 + Tigger1 DNA MER2_type 1745 2174 -244 356 78 0 0 chr2 99507707 99507758 -153748825 - Alu SINE Alu -3 298 248 1887 127 0 7 chr2 99507761 99508037 -153748546 - AluSx SINE Alu -38 274 1 431 122 40 0 chr2 99508037 99508111 -153748472 + Tigger1 DNA MER2_type 2288 2364 -54 24179 177 26 17 chr2 99508263 99510921 -153745662 + L1PA16 LINE L1 1 2636 -4968 7363 45 8 12 chr2 99510921 99512463 -153744120 + SVA Other Other 4 1383 -3 24179 177 26 17 chr2 99512463 99513353 -153743230 + L1PA16 LINE L1 2636 3517 -4087 2197 59 12 71 chr2 99513353 99513676 -153742907 - AluY SINE Alu -7 304 1 24179 177 26 17 chr2 99513676 99516612 -153739971 + L1PA16 LINE L1 3517 7595 -9 696 232 69 108 chr2 99516614 99517049 -153739534 - MER41-int LTR ERV1 -2363 2573 2156 225 0 0 0 chr2 99517049 99517074 -153739509 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 618 209 0 0 chr2 99517078 99517188 -153739395 - FLAM_A SINE Alu -32 110 1 1082 245 53 47 chr2 99517203 99517299 -153739284 - MER41-int LTR ERV1 -2749 2187 2093 306 73 0 0 chr2 99517299 99517340 -153739243 + (TA)n Simple_repeat Simple_repeat 1 41 0 2249 80 0 25 chr2 99517340 99517654 -153738929 - AluSg SINE Alu -4 306 1 1082 245 53 47 chr2 99517654 99518107 -153738476 - MER41-int LTR ERV1 -2842 2094 1634 1023 173 29 47 chr2 99518319 99518597 -153737986 - MER41-int LTR ERV1 -3423 1513 1241 23 54 0 0 chr2 99518598 99518635 -153737948 + AT_rich Low_complexity Low_complexity 1 37 0 180 57 0 0 chr2 99518636 99518935 -153737648 + AT_rich Low_complexity Low_complexity 1 299 0 262 273 12 19 chr2 99518957 99519118 -153737465 + (TAAA)n Simple_repeat Simple_repeat 3 162 0 877 186 65 40 chr2 99519151 99519426 -153737157 - MER41-int LTR ERV1 -3667 1269 988 282 259 62 0 chr2 99519831 99519912 -153736671 - MER41-int LTR ERV1 -4496 1450 1365 490 120 67 0 chr2 99520119 99520194 -153736389 - LTR10B LTR ERV1 0 547 468 44285 44 4 0 chr2 99520194 99526318 -153730265 - L1PA4 LINE L1 -2 6153 7 1615 182 111 33 chr2 99526321 99526771 -153729812 - LTR10B LTR ERV1 -62 485 1 1011 238 62 13 chr2 99526910 99527399 -153729184 - MER34 LTR ERV1 0 542 1 225 337 10 10 chr2 99527593 99527691 -153728892 - MLT1J1 LTR MaLR -285 161 64 2162 113 0 0 chr2 99529401 99529702 -153726881 - AluSq SINE Alu -12 301 1 1005 273 33 59 chr2 99530513 99530935 -153725648 + MLT1J LTR MaLR 100 510 -1 1408 230 161 33 chr2 99531023 99531586 -153724997 + MLT1E2 LTR MaLR 6 626 0 431 284 138 12 chr2 99531617 99531871 -153724712 - HAL1 LINE L1 -4 2503 2218 2059 119 6 13 chr2 99531915 99532227 -153724356 - AluSx SINE Alu -2 310 1 243 0 0 0 chr2 99532457 99532484 -153724099 + (CA)n Simple_repeat Simple_repeat 1 27 0 544 309 117 28 chr2 99532491 99532808 -153723775 - HAL1 LINE L1 -625 1882 1538 2601 162 9 7 chr2 99533616 99533974 -153722609 + MSTB LTR MaLR 1 362 -64 2004 120 34 0 chr2 99533974 99534266 -153722317 - AluSx SINE Alu -10 302 1 2601 162 9 7 chr2 99534266 99534332 -153722251 + MSTB LTR MaLR 362 426 0 665 179 0 34 chr2 99534461 99534578 -153722005 - FRAM SINE Alu -16 160 48 303 322 20 47 chr2 99535364 99535513 -153721070 - MER5A DNA MER1_type 0 189 45 199 286 36 62 chr2 99536157 99536269 -153720314 - L3 LINE CR1 -596 981 873 195 42 0 0 chr2 99537838 99537862 -153718721 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1405 191 74 3 chr2 99537888 99538171 -153718412 - AluSq SINE Alu 0 303 1 254 324 221 22 chr2 99538280 99538552 -153718031 - L2 LINE L2 -37 3235 2910 1524 60 0 25 chr2 99541454 99541654 -153714929 - AluY SINE Alu -12 299 105 204 174 22 22 chr2 99541966 99542012 -153714571 - L2 LINE L2 -43 3270 3225 403 254 66 16 chr2 99543088 99543210 -153713373 + MIR3 SINE MIR 76 203 -5 371 328 25 0 chr2 99543760 99543879 -153712704 + MIR SINE MIR 28 149 -113 275 372 31 8 chr2 99545824 99545953 -153710630 - MIR SINE MIR -20 242 111 222 37 0 0 chr2 99547267 99547294 -153709289 + (GGGTG)n Simple_repeat Simple_repeat 4 30 0 2346 81 0 0 chr2 99547394 99547702 -153708881 - AluSc SINE Alu -1 308 1 688 256 0 0 chr2 99548428 99548561 -153708022 + MER91A DNA MER1_type 1 133 -63 1605 160 6 58 chr2 99548742 99549055 -153707528 - AluJb SINE Alu -2 310 14 305 269 40 8 chr2 99551717 99551837 -153704746 + MIR3 SINE MIR 57 181 -27 360 0 0 0 chr2 99551879 99551919 -153704664 + (TTCA)n Simple_repeat Simple_repeat 1 40 0 381 330 150 13 chr2 99551921 99552154 -153704429 - L2 LINE L2 -7 3306 3042 2258 118 80 53 chr2 99552278 99552324 -153704259 - MSTB LTR MaLR 0 426 383 1601 175 14 24 chr2 99552324 99552621 -153703962 + AluJb SINE Alu 5 298 -14 2258 118 80 53 chr2 99552621 99552988 -153703595 - MSTB LTR MaLR -43 383 2 360 271 0 0 chr2 99553982 99554067 -153702516 + MIR SINE MIR 53 137 -71 282 396 24 18 chr2 99554260 99554429 -153702154 - MIR SINE MIR -47 215 46 687 134 0 0 chr2 99554766 99554885 -153701698 + (TCCCC)n Simple_repeat Simple_repeat 5 123 0 228 122 0 0 chr2 99555978 99556019 -153700564 + (TG)n Simple_repeat Simple_repeat 1 41 0 200 284 14 40 chr2 99556840 99556914 -153699669 - L3b LINE CR1 -186 1397 1326 247 289 0 63 chr2 99557671 99557830 -153698753 + C-rich Low_complexity Low_complexity 2 150 0 503 257 35 35 chr2 99558650 99558794 -153697789 + MIR SINE MIR 119 262 0 1511 101 0 0 chr2 99558936 99559171 -153697412 - AluJb SINE Alu 0 319 85 462 342 69 40 chr2 99559317 99559684 -153696899 - L1MCb LINE L1 -4908 1137 864 406 255 92 43 chr2 99559964 99560105 -153696478 - L1MCa LINE L1 -4314 2112 1965 220 274 266 32 chr2 99560999 99561123 -153695460 - MIR SINE MIR 0 262 110 262 157 14 14 chr2 99562291 99562361 -153694222 + CT-rich Low_complexity Low_complexity 2 71 0 422 316 45 12 chr2 99563406 99563570 -153693013 + MIR SINE MIR 33 201 -52 2165 117 0 7 chr2 99563642 99563951 -153692632 + AluJb SINE Alu 1 307 -5 201 74 0 0 chr2 99564241 99564268 -153692315 + (A)n Simple_repeat Simple_repeat 1 27 0 502 103 23 0 chr2 99565270 99565357 -153691226 + (GA)n Simple_repeat Simple_repeat 1 89 0 500 260 114 35 chr2 99566334 99566588 -153689995 - MLT1J LTR MaLR -14 497 224 363 297 149 7 chr2 99568015 99568163 -153688420 - MIR SINE MIR -63 199 31 434 341 88 0 chr2 99569518 99569735 -153686848 + MIR SINE MIR 15 250 -12 252 250 0 0 chr2 99569960 99570040 -153686543 + (TG)n Simple_repeat Simple_repeat 1 80 0 205 360 140 0 chr2 99570469 99570605 -153685978 - MER5B DNA MER1_type -18 160 6 409 292 46 0 chr2 99570715 99570845 -153685738 - MIR SINE MIR -71 191 56 929 219 84 3 chr2 99571916 99572203 -153684380 - MER33 DNA MER1_type 0 324 15 643 258 75 12 chr2 99572290 99572542 -153684041 + MER113 DNA MER1_type? 45 312 -209 294 309 26 31 chr2 99572619 99572810 -153683773 - MER90 LTR ERV1 0 614 425 4083 241 30 2 chr2 99573423 99574474 -153682109 - L1MD2 LINE L1 -2 6357 5277 331 255 39 20 chr2 99575537 99575639 -153680944 + MIR SINE MIR 83 186 -76 306 293 0 0 chr2 99576097 99576230 -153680353 + (TG)n Simple_repeat Simple_repeat 1 133 0 2241 95 7 0 chr2 99577536 99577831 -153678752 - AluSx SINE Alu -15 297 1 282 242 152 10 chr2 99578054 99578153 -153678430 + MIR3 SINE MIR 81 193 -15 388 286 30 6 chr2 99579283 99579451 -153677132 + (CA)n Simple_repeat Simple_repeat 1 172 0 600 148 0 0 chr2 99582023 99582131 -153674452 + (CA)n Simple_repeat Simple_repeat 1 108 0 451 349 0 0 chr2 99582551 99582720 -153673863 - HERVL LTR ERVL -434 5220 5052 340 283 24 28 chr2 99582758 99582919 -153673664 - HERVL LTR ERVL -513 4972 4811 443 277 63 3 chr2 99584138 99584375 -153672208 - HERVL LTR ERVL -2380 3384 3085 287 298 139 43 chr2 99584503 99584849 -153671734 - MLT1J LTR MaLR -25 486 108 214 254 197 0 chr2 99587134 99587205 -153669378 + L2 LINE L2 3229 3313 0 434 236 6 55 chr2 99588980 99589162 -153667421 + C-rich Low_complexity Low_complexity 1 173 0 246 333 71 54 chr2 99589664 99589904 -153666679 - LTR37B LTR ERV1 -25 443 200 445 165 41 21 chr2 99590087 99590184 -153666399 + MIR SINE MIR 58 156 -106 1847 173 10 0 chr2 99590190 99590490 -153666093 + AluJb SINE Alu 1 303 -9 333 286 168 0 chr2 99590570 99590689 -153665894 + MIR SINE MIR 84 222 -40 225 333 37 0 chr2 99590749 99590830 -153665753 + MIR3 SINE MIR 116 199 -9 2287 39 3 11 chr2 99592337 99592664 -153663919 + AluY SINE Alu 1 325 0 2264 99 0 0 chr2 99592738 99593040 -153663543 + AluSg SINE Alu 1 302 -8 740 181 0 11 chr2 99593687 99593869 -153662714 + (CA)n Simple_repeat Simple_repeat 1 180 0 729 196 0 0 chr2 99593891 99594234 -153662349 + (CA)n Simple_repeat Simple_repeat 1 343 0 671 200 4 15 chr2 99594246 99594523 -153662060 + (CA)n Simple_repeat Simple_repeat 1 273 0 241 360 88 0 chr2 99594804 99594918 -153661665 + L2 LINE L2 2697 2820 -494 261 331 125 20 chr2 99595187 99595435 -153661148 - HERVL LTR ERVL -3958 1696 1423 384 191 0 0 chr2 99595469 99595563 -153661020 + (CA)n Simple_repeat Simple_repeat 1 94 0 260 392 41 0 chr2 99595763 99595860 -153660723 - MIR SINE MIR -70 192 92 227 332 3 0 chr2 99596369 99596451 -153660132 - MIR SINE MIR -61 147 64 460 285 55 42 chr2 99597151 99597316 -153659267 + MIR SINE MIR 87 253 -9 274 277 69 20 chr2 99598909 99599010 -153657573 - L2 LINE L2 -40 3273 3168 941 273 98 28 chr2 99599247 99599636 -153656947 - L2 LINE L2 -706 2608 2193 813 110 0 31 chr2 99600449 99600576 -153656007 + AluSq/x SINE Alu 11 133 -180 308 315 11 0 chr2 99600763 99600852 -153655731 + MER103 DNA DNA 3 92 -74 422 271 54 59 chr2 99600866 99601087 -153655496 + MIR SINE MIR 2 221 -41 237 192 96 27 chr2 99601137 99601210 -153655373 + MIR3 SINE MIR 109 186 -22 288 262 183 32 chr2 99601324 99601450 -153655133 + L2 LINE L2 3169 3313 0 335 209 47 23 chr2 99601739 99601825 -153654758 + MIR SINE MIR 163 250 -12 269 285 23 111 chr2 99602390 99602562 -153654021 - MIR SINE MIR -26 236 80 804 244 2 104 chr2 99603345 99603825 -153652758 - L1MCa LINE L1 -4681 1882 1452 435 273 36 23 chr2 99603832 99603984 -153652599 - L1MCa LINE L1 -5035 1349 1148 445 225 16 0 chr2 99603995 99604124 -153652459 - L1ME LINE L1 -3983 2401 2271 859 301 71 15 chr2 99604172 99604497 -153652086 + MLT2F LTR ERVL 321 663 0 497 319 60 15 chr2 99604528 99604860 -153651723 - L1ME LINE L1 -5394 1169 823 316 341 34 38 chr2 99605139 99605501 -153651082 - L1ME LINE L1 -5945 427 212 483 309 6 12 chr2 99605662 99605824 -153650759 - MIR SINE MIR -15 247 87 206 345 63 21 chr2 99605817 99605959 -153650624 + L2 LINE L2 2507 2654 -660 * 269 208 143 13 chr2 99606286 99606363 -153650220 + MIR SINE MIR 48 134 -128 259 301 27 81 chr2 99606533 99606719 -153649864 - MLT1J LTR MaLR -232 279 104 1973 144 6 13 chr2 99607405 99607717 -153648866 + AluSx SINE Alu 1 310 -2 382 303 129 63 chr2 99607912 99608163 -153648420 - MLT1J LTR MaLR -57 454 162 2041 115 7 7 chr2 99608163 99608483 -153648100 + AluSq SINE Alu 1 313 0 382 303 129 63 chr2 99608483 99608657 -153647926 - MLT1J LTR MaLR -349 162 1 904 309 74 7 chr2 99608658 99609075 -153647508 + MLT1L LTR MaLR 162 606 -9 2416 133 85 10 chr2 99609152 99609550 -153647033 + MSTA LTR MaLR 1 428 0 355 308 48 20 chr2 99609709 99609855 -153646728 - MIR3 SINE MIR -40 168 19 444 338 94 41 chr2 99609934 99610328 -153646255 - L2 LINE L2 -79 3234 2820 * 644 254 161 0 chr2 99610315 99610508 -153646075 + MIR SINE MIR 18 241 -21 642 272 171 22 chr2 99610570 99610927 -153645656 - MLT1K LTR MaLR 0 588 179 487 335 161 5 chr2 99611041 99611420 -153645163 - L2 LINE L2 -552 2762 2325 413 217 92 59 chr2 99612886 99613038 -153643545 - MIR SINE MIR -70 192 36 26 64 0 0 chr2 99614328 99614375 -153642208 + GC_rich Low_complexity Low_complexity 1 47 0 23 86 0 0 chr2 99614548 99614606 -153641977 + GC_rich Low_complexity Low_complexity 1 58 0 200 87 43 22 chr2 99614696 99614742 -153641841 + (CCG)n Simple_repeat Simple_repeat 2 48 0 23 0 0 0 chr2 99614832 99614855 -153641728 + GC_rich Low_complexity Low_complexity 1 23 0 21 57 0 0 chr2 99614942 99614977 -153641606 + GC_rich Low_complexity Low_complexity 1 35 0 368 331 72 12 chr2 99616898 99617064 -153639519 + MIR SINE MIR 22 197 -65 275 320 41 18 chr2 99617381 99617534 -153639049 + MIR SINE MIR 32 193 -69 550 257 57 43 chr2 99618365 99618575 -153638008 + L2 LINE L2 3099 3311 -2 403 250 61 54 chr2 99618826 99618974 -153637609 + MER5B DNA MER1_type 1 149 -29 516 276 55 6 chr2 99619125 99619288 -153637295 + MER5A DNA MER1_type 19 189 0 1034 260 156 10 chr2 99619300 99619711 -153636872 - L2 LINE L2 -516 2798 2328 365 272 0 0 chr2 99619713 99619805 -153636778 - MLT1D LTR MaLR -8 497 406 777 157 0 0 chr2 99619817 99619938 -153636645 + FLAM_C SINE Alu 13 133 -10 487 283 137 49 chr2 99619938 99620088 -153636495 - L2 LINE L2 -998 2316 2181 2107 101 31 0 chr2 99620088 99620375 -153636208 + AluSx SINE Alu 1 296 -16 487 283 137 49 chr2 99620375 99620553 -153636030 - L2 LINE L2 -1133 2181 1959 215 184 0 41 chr2 99620658 99620707 -153635876 + CT-rich Low_complexity Low_complexity 1 47 0 210 217 24 60 chr2 99620756 99620839 -153635744 + C-rich Low_complexity Low_complexity 3 82 0 180 333 73 10 chr2 99621337 99621433 -153635150 + L2 LINE L2 383 484 -2830 362 258 58 0 chr2 99621567 99621686 -153634897 + MIR SINE MIR 24 154 -62 815 221 50 0 chr2 99621927 99622126 -153634457 + MER20 DNA MER1_type 5 213 -6 215 267 67 48 chr2 99622130 99622235 -153634348 + MIR3 SINE MIR 53 159 -49 * 257 335 138 27 chr2 99622229 99622453 -153634130 + L2 LINE L2 3017 3265 -7 181 222 0 0 chr2 99623148 99623184 -153633399 - MIR SINE MIR -63 145 110 200 438 0 0 chr2 99623344 99623440 -153633143 + MIR SINE MIR 146 241 -21 7329 55 0 3 chr2 99623455 99624897 -153631686 - L1PA6 LINE L1 -2 6152 4713 341 234 180 18 chr2 99626076 99626243 -153630340 - L2 LINE L2 -1416 1898 1705 1316 176 65 109 chr2 99626645 99626959 -153629624 - MSTD LTR MaLR 0 396 103 666 231 8 0 chr2 99626959 99627089 -153629494 + FLAM_A SINE Alu 1 131 -2 1316 176 65 109 chr2 99627089 99627188 -153629395 - MSTD LTR MaLR -293 103 1 3890 174 254 84 chr2 99627199 99628247 -153628336 - MSTD-int LTR MaLR -2 1733 301 402 155 0 14 chr2 99628247 99628318 -153628265 + Alu SINE Alu 232 301 -10 3890 174 254 84 chr2 99628318 99628680 -153627903 - MSTD-int LTR MaLR -1434 301 2 1539 202 97 32 chr2 99628682 99629054 -153627529 - MSTD LTR MaLR 0 396 1 243 321 65 34 chr2 99629328 99629593 -153626990 + L2 LINE L2 2395 2763 -551 229 289 135 0 chr2 99629870 99629974 -153626609 - L2 LINE L2 -26 3287 3170 1362 204 38 59 chr2 99629978 99630210 -153626373 - MLT1B LTR MaLR 0 390 168 2398 79 3 0 chr2 99630210 99630513 -153626070 - AluSx SINE Alu -8 304 1 1362 204 38 59 chr2 99630513 99630672 -153625911 - MLT1B LTR MaLR -222 168 7 1439 143 0 4 chr2 99630703 99630934 -153625649 - Charlie3 DNA MER1_type -2480 230 1 971 300 129 47 chr2 99631169 99632420 -153624163 - L1M4 LINE L1 -920 5226 3874 356 311 37 22 chr2 99632429 99632564 -153624019 - L1M4 LINE L1 -2336 3810 3674 2270 157 20 80 chr2 99632565 99632965 -153623618 + MSTB LTR MaLR 1 373 -53 1555 140 25 4 chr2 99632965 99633201 -153623382 + AluJb SINE Alu 56 296 -16 2270 157 20 80 chr2 99633201 99633252 -153623331 + MSTB LTR MaLR 373 425 -1 2275 108 0 0 chr2 99633264 99633569 -153623014 - AluSx SINE Alu -7 305 1 332 234 353 0 chr2 99633602 99633786 -153622797 - L2 LINE L2 -1396 1918 1670 2257 229 56 52 chr2 99633957 99634058 -153622525 - L1ME1 LINE L1 -17 6218 6119 197 32 0 32 chr2 99634058 99634089 -153622494 + (TTTAA)n Simple_repeat Simple_repeat 3 32 0 913 188 31 0 chr2 99634092 99634252 -153622331 - FRAM SINE Alu -1 165 1 2257 229 56 52 chr2 99634252 99635100 -153621483 - L1ME1 LINE L1 -117 6118 5261 2031 99 0 46 chr2 99635111 99635414 -153621169 + AluSx SINE Alu 24 312 0 1140 250 6 14 chr2 99635421 99635781 -153620802 - L1ME1 LINE L1 -1438 4777 4421 2530 59 0 0 chr2 99635866 99636169 -153620414 - AluSq SINE Alu -10 303 1 1438 110 5 0 chr2 99636435 99636644 -153619939 + L1PB1 LINE L1 5942 6151 0 277 241 0 0 chr2 99637086 99637165 -153619418 - L1ME1 LINE L1 -1775 4440 4362 * 1393 215 36 3 chr2 99637158 99637516 -153619067 - L1ME1 LINE L1 -2075 4140 3771 469 335 0 0 chr2 99637516 99637719 -153618864 - L1ME1 LINE L1 -2680 3535 3333 1739 162 32 19 chr2 99637720 99638028 -153618555 - AluJo SINE Alu 0 312 1 353 258 73 22 chr2 99638028 99638442 -153618141 - L1ME1 LINE L1 -5165 1040 656 1274 246 52 20 chr2 99638606 99638867 -153617716 - L1M LINE L1 -751 5395 5144 2112 104 3 29 chr2 99638867 99639176 -153617407 - AluSx SINE Alu -11 301 1 1274 246 52 20 chr2 99639176 99639549 -153617034 - L1M LINE L1 -1002 5144 2790 943 252 90 3 chr2 99639549 99639894 -153616689 - L1M4 LINE L1 -3404 2742 2368 2249 105 0 9 chr2 99639897 99640212 -153616371 - AluSx SINE Alu 0 312 1 277 298 53 0 chr2 99640216 99640310 -153616273 - L1M4 LINE L1 -3884 2262 2164 243 0 0 0 chr2 99640314 99640341 -153616242 + (TCCA)n Simple_repeat Simple_repeat 1 27 0 1508 242 56 2 chr2 99640574 99641020 -153615563 - L2 LINE L2 -1616 1698 1229 253 286 55 0 chr2 99641099 99641190 -153615393 - L2 LINE L2 -39 3233 3138 352 242 31 78 chr2 99641378 99641506 -153615077 - L1ME4a LINE L1 -2 6119 5998 2404 56 13 0 chr2 99641522 99641825 -153614758 - AluY SINE Alu -4 307 1 201 284 39 39 chr2 99641946 99642048 -153614535 - L2 LINE L2 -172 3100 2999 225 279 0 16 chr2 99642232 99642293 -153614290 - MER91A DNA MER1_type -136 60 1 1591 166 33 23 chr2 99646226 99646533 -153610050 - AluJo SINE Alu 0 312 3 1950 112 0 51 chr2 99646560 99646874 -153609709 + AluSx SINE Alu 1 298 -14 320 360 0 0 chr2 99646874 99646963 -153609620 + L1MC4 LINE L1 6615 6703 -1339 * 334 258 50 0 chr2 99646943 99647048 -153609535 - L1MCa LINE L1 -1339 6983 1995 337 47 0 0 chr2 99647249 99647292 -153609291 + FRAM/FAM SINE Alu 37 79 -96 1243 297 77 42 chr2 99647578 99648491 -153608092 - HAL1 LINE L1 -703 1804 860 1388 153 84 45 chr2 99648837 99649124 -153607459 + AluJo SINE Alu 5 302 0 487 316 0 0 chr2 99649337 99649511 -153607072 + (CA)n Simple_repeat Simple_repeat 1 174 0 207 273 26 0 chr2 99649839 99649916 -153606667 + CT-rich Low_complexity Low_complexity 1 79 0 276 100 0 0 chr2 99651219 99651259 -153605324 + (CCCA)n Simple_repeat Simple_repeat 1 40 0 251 289 62 0 chr2 99651886 99651983 -153604600 + MIR SINE MIR 28 130 -78 333 0 0 0 chr2 99652277 99652314 -153604269 + (CA)n Simple_repeat Simple_repeat 2 38 0 252 130 43 0 chr2 99654271 99654317 -153602266 + MER63 DNA MER1_type 3 50 -160 270 285 190 21 chr2 99654701 99654943 -153601640 + L1MEc LINE L1 1346 1628 -4768 1942 117 0 26 chr2 99654946 99655253 -153601330 + AluSq SINE Alu 6 304 -9 487 289 57 13 chr2 99655436 99655595 -153600988 + MLT1G1 LTR MaLR 13 178 -417 * 997 275 71 40 chr2 99655590 99655968 -153600615 - MLT1G1 LTR MaLR -199 396 7 542 267 53 0 chr2 99656134 99656265 -153600318 + MIR SINE MIR 55 192 -70 321 272 9 44 chr2 99656784 99656898 -153599685 + MIR SINE MIR 76 185 -77 762 290 122 39 chr2 99659615 99660074 -153596509 + MLT1K LTR MaLR 17 513 -75 214 372 35 9 chr2 99660757 99660870 -153595713 - L2 LINE L2 -1 3271 3156 257 339 28 0 chr2 99661202 99661311 -153595272 - L2 LINE L2 -584 2730 2619 1774 320 55 8 chr2 99661436 99662077 -153594506 + ERVL LTR ERVL 3186 3856 -1908 1162 231 35 4 chr2 99662084 99662344 -153594239 + ERVL LTR ERVL 4168 4435 -1329 779 209 79 101 chr2 99662367 99662644 -153593939 + ERVL LTR ERVL 4800 5070 -694 705 209 86 120 chr2 99662687 99662817 -153593766 + LTR41 LTR ERVL 477 610 -163 1779 157 3 10 chr2 99662817 99663116 -153593467 - AluJb SINE Alu -11 301 5 705 209 86 120 chr2 99663116 99663286 -153593297 + LTR41 LTR ERVL 610 767 -6 403 287 105 44 chr2 99663300 99663340 -153593243 - MLT1F1 LTR MaLR -375 192 156 2031 172 15 47 chr2 99663340 99663741 -153592842 + MLT1B LTR MaLR 1 388 -2 403 287 105 44 chr2 99663741 99663881 -153592702 - MLT1F1 LTR MaLR -411 156 1 400 327 128 43 chr2 99663931 99664422 -153592161 - L2 LINE L2 -750 2564 2018 1298 274 82 25 chr2 99664422 99664900 -153591683 - MLT1J LTR MaLR -2 509 5 400 327 128 43 chr2 99664900 99664971 -153591612 - L2 LINE L2 -1296 2018 1954 1063 75 7 14 chr2 99664992 99665160 -153591423 + AluSg/x SINE Alu 136 302 0 453 289 19 56 chr2 99665160 99665430 -153591153 - L2 LINE L2 -1381 1933 1674 2113 201 32 36 chr2 99665845 99666203 -153590380 - MER49 LTR ERV1 0 923 565 937 201 6 0 chr2 99666203 99666367 -153590216 + FRAM SINE Alu 1 165 -1 2113 201 32 36 chr2 99666367 99666667 -153589916 - MER49 LTR ERV1 -358 565 183 2373 79 0 0 chr2 99666809 99667113 -153589470 - AluY SINE Alu -7 304 1 3544 182 31 5 chr2 99667114 99667762 -153588821 + Tigger7 DNA MER2_type 3 667 -1820 685 181 0 0 chr2 99667777 99667893 -153588690 + Tigger7 DNA MER2_type 2362 2477 -14 820 246 51 4 chr2 99667893 99668169 -153588414 - L1ME2 LINE L1 -234 5930 5642 2369 175 80 51 chr2 99668179 99668789 -153587794 - MER92B LTR ERV1 -8 628 1 1536 205 11 57 chr2 99668789 99669055 -153587528 - L1ME2 LINE L1 -524 5642 5396 2395 76 0 0 chr2 99669055 99669358 -153587225 - AluY SINE Alu -8 303 1 1536 205 11 57 chr2 99669358 99669552 -153587031 - L1ME2 LINE L1 -770 5396 5195 367 326 235 2 chr2 99669684 99670135 -153586448 + L2 LINE L2 2265 2820 -494 238 272 111 0 chr2 99670360 99670441 -153586142 + MIR SINE MIR 58 147 -61 329 257 128 0 chr2 99670571 99670680 -153585903 + MER96 DNA MER1_type? 1 123 -52 323 301 98 0 chr2 99671338 99671461 -153585122 + MIR SINE MIR 69 203 -59 591 222 56 44 chr2 99671791 99671971 -153584612 + MIR SINE MIR 47 228 -34 1905 136 0 7 chr2 99672402 99672703 -153583880 - AluSx SINE Alu -13 299 1 321 272 136 0 chr2 99672793 99672896 -153583687 - L2 LINE L2 0 3272 3156 200 313 52 52 chr2 99673318 99673433 -153583150 + L2 LINE L2 3155 3269 -3 254 264 124 41 chr2 99674047 99674168 -153582415 - MIR3 SINE MIR -27 181 51 324 249 171 60 chr2 99674525 99674742 -153581841 + L1MC4a LINE L1 5723 5963 -1845 489 263 163 44 chr2 99675440 99675983 -153580600 - L1ME4a LINE L1 -3 6118 5472 235 286 28 138 chr2 99675986 99676479 -153580104 - L1MC4 LINE L1 0 8042 7604 566 214 174 31 chr2 99676479 99676509 -153580074 - MER58A DNA MER1_type -2196 224 200 2441 115 19 25 chr2 99676509 99676875 -153579708 - THE1B LTR MaLR 0 364 1 566 214 174 31 chr2 99676875 99677040 -153579543 - MER58A DNA MER1_type -2220 200 1 1593 285 128 20 chr2 99677055 99677429 -153579154 - L1MC4 LINE L1 -470 7572 7239 1870 137 25 0 chr2 99677429 99677714 -153578869 - AluSx SINE Alu -18 294 3 1593 285 128 20 chr2 99677714 99678076 -153578507 - L1MC4 LINE L1 -803 7239 6757 234 305 9 9 chr2 99678132 99678237 -153578346 - L1ME4a LINE L1 -691 5430 5326 275 128 21 0 chr2 99678239 99678286 -153578297 + MIR SINE MIR 190 237 -25 1615 173 7 17 chr2 99679903 99680198 -153576385 - AluJo SINE Alu -20 292 1 329 261 131 20 chr2 99683945 99684098 -153572485 + MIR SINE MIR 81 250 -12 204 362 8 31 chr2 99684209 99684336 -153572247 + MIR3 SINE MIR 7 130 -78 1151 199 72 86 chr2 99685691 99686052 -153570531 - MLT1A1 LTR MaLR -6 359 4 189 0 0 0 chr2 99686358 99686379 -153570204 + (TG)n Simple_repeat Simple_repeat 2 22 0 1564 235 82 27 chr2 99686900 99687339 -153569244 + MLT1C LTR MaLR 3 465 -2 225 338 0 0 chr2 99687615 99687686 -153568897 - LTR16C LTR ERVL 0 491 421 330 108 0 60 chr2 99687800 99687871 -153568712 - MLT2B1 LTR ERVL 0 515 452 2116 177 108 25 chr2 99687956 99688392 -153568191 - MLT2B1 LTR ERVL -48 472 1 246 264 88 22 chr2 99688968 99689059 -153567524 - MIR3 SINE MIR -2 206 110 387 0 0 0 chr2 99689113 99689156 -153567427 + (TG)n Simple_repeat Simple_repeat 2 44 0 2067 214 34 61 chr2 99690051 99690607 -153565976 - MLT1F LTR MaLR -1 541 1 913 230 6 0 chr2 99690687 99690861 -153565722 - MER5A DNA MER1_type -2 187 13 196 235 0 39 chr2 99690919 99690970 -153565613 + MER5B DNA MER1_type 1 49 -129 2826 62 8 8 chr2 99691113 99691483 -153565100 + L1PB1 LINE L1 5773 6142 -9 518 365 97 17 chr2 99691511 99691974 -153564609 - L3 LINE CR1 -130 1447 948 396 155 0 0 chr2 99692346 99692417 -153564166 + GA-rich Low_complexity Low_complexity 2 72 0 269 267 33 11 chr2 99693087 99693177 -153563406 - L2 LINE L2 -22 3291 3200 438 303 48 32 chr2 99693630 99693818 -153562765 + MIR SINE MIR 21 211 -51 221 390 76 36 chr2 99694390 99694613 -153561970 - L2 LINE L2 0 3272 3041 239 366 9 17 chr2 99694958 99695088 -153561495 + MIR SINE MIR 13 141 -67 277 338 51 45 chr2 99695193 99695350 -153561233 + L2 LINE L2 3102 3259 -13 554 271 114 14 chr2 99696197 99696407 -153560176 - MIR SINE MIR -4 258 28 1456 167 50 25 chr2 99696995 99697111 -153559472 + AluJo SINE Alu 3 115 -197 216 0 0 0 chr2 99697111 99697135 -153559448 + (TAAAA)n Simple_repeat Simple_repeat 1 24 0 1456 167 50 25 chr2 99697135 99697299 -153559284 + AluJo SINE Alu 115 290 -22 216 244 0 0 chr2 99698374 99698415 -153558168 + L2 LINE L2 3181 3221 -51 1044 272 28 25 chr2 99698471 99698791 -153557792 - L2 LINE L2 -3 3310 2990 230 340 87 28 chr2 99699083 99699371 -153557212 + L2 LINE L2 2550 2854 -460 261 0 0 0 chr2 99699381 99699410 -153557173 + (CA)n Simple_repeat Simple_repeat 2 30 0 374 350 90 46 chr2 99699417 99699806 -153556777 + L2 LINE L2 2854 3259 -13 207 130 19 93 chr2 99700031 99700085 -153556498 - MIR SINE MIR -137 71 22 282 128 128 0 chr2 99700615 99700662 -153555921 - AluSc SINE Alu -48 251 199 549 296 110 2 chr2 99701123 99701328 -153555255 - MIR SINE MIR -7 255 30 321 323 189 15 chr2 99701964 99702165 -153554418 + MIR SINE MIR 14 249 -13 974 195 29 15 chr2 99703195 99703400 -153553183 + L1PA16 LINE L1 5833 6040 -126 361 150 50 0 chr2 99706095 99706155 -153550428 + L1PA16 LINE L1 6021 6083 -83 221 0 0 33 chr2 99706305 99706335 -153550248 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1254 178 12 19 chr2 99706337 99706596 -153549987 - AluJb SINE Alu -27 285 29 221 83 28 0 chr2 99706597 99706633 -153549950 + (TA)n Simple_repeat Simple_repeat 2 38 0 235 141 0 78 chr2 99706706 99706770 -153549813 - L1MC4 LINE L1 -1336 6706 6648 1730 192 6 34 chr2 99707281 99707630 -153548953 - MER2 DNA MER2_type 0 345 7 320 179 0 0 chr2 99808365 99808421 -153448162 + AluSp/q SINE Alu 246 301 -2 567 184 0 0 chr2 99808427 99808525 -153448058 + LOR1b LTR ERV1 152 249 -212 356 87 52 52 chr2 99808627 99808742 -153447841 + (TATAA)n Simple_repeat Simple_repeat 5 119 0 1770 56 0 0 chr2 99808768 99808981 -153447602 + AluY SINE Alu 83 295 -16 2248 130 94 5 chr2 99808984 99809376 -153447207 - L1MA8 LINE L1 -12 6279 5853 432 293 139 31 chr2 99809537 99809926 -153446657 - L1M4 LINE L1 -1896 4250 3820 2097 108 3 3 chr2 99810591 99810896 -153445687 - AluSg SINE Alu -5 305 1 1169 242 97 5 chr2 99811288 99811689 -153444894 + L1MD2 LINE L1 2209 2646 -3500 1029 234 0 33 chr2 99811689 99811963 -153444620 - AluJo SINE Alu -4 308 44 1340 214 110 30 chr2 99811966 99812849 -153443734 + L1MD2 LINE L1 2641 5397 -749 1236 281 164 8 chr2 99812949 99813454 -153443129 - L1MEc LINE L1 -5678 718 135 846 246 46 58 chr2 99813483 99813943 -153442640 + L1MDa LINE L1 335 1172 -5368 642 287 41 52 chr2 99814086 99814431 -153442152 - L1ME3A LINE L1 -222 5948 5539 595 159 179 20 chr2 99814431 99814582 -153442001 + MER69A DNA AcHobo 1 175 -2 642 287 41 52 chr2 99814582 99814710 -153441873 - L1ME3A LINE L1 -631 5539 5411 1176 107 10 41 chr2 99815409 99815565 -153441018 + L1MB3 LINE L1 5987 6137 -46 2206 72 3 42 chr2 99815565 99815872 -153440711 + AluSc SINE Alu 3 297 -12 1176 107 10 41 chr2 99815872 99815911 -153440672 + L1MB3 LINE L1 6137 6176 -7 2079 109 10 0 chr2 99815922 99816224 -153440359 + AluSx SINE Alu 1 305 -7 1155 159 33 106 chr2 99816237 99816300 -153440283 + L1MD2 LINE L1 5679 5745 -614 2011 142 0 7 chr2 99816300 99816610 -153439973 + AluSx SINE Alu 3 310 -2 1155 159 33 106 chr2 99816610 99816848 -153439735 + L1MD2 LINE L1 5745 5958 -401 4143 172 67 19 chr2 99817035 99817732 -153438851 - L1MB5 LINE L1 0 6174 5427 1839 119 0 51 chr2 99817732 99818080 -153438503 - AluSx SINE Alu 0 312 1 4143 172 67 19 chr2 99818080 99818235 -153438348 - L1MB5 LINE L1 -747 5427 5281 1023 52 0 0 chr2 99818268 99818404 -153438179 + AluY SINE Alu 175 310 -1 363 213 16 0 chr2 99818745 99818806 -153437777 - AluJ/FLAM SINE Alu -240 62 1 1945 124 29 10 chr2 99818862 99819206 -153437377 + AluSq SINE Alu 1 350 0 2930 256 33 3 chr2 99819207 99819866 -153436717 + ERVL LTR ERVL 1474 2152 -3612 795 162 21 0 chr2 99819869 99820011 -153436572 + FRAM SINE Alu 32 176 0 1726 167 45 18 chr2 99820015 99820345 -153436238 + L1MC/D LINE L1 5254 5592 -767 2341 97 0 0 chr2 99820371 99820682 -153435901 - AluSq SINE Alu -2 311 1 511 210 53 35 chr2 99820802 99820987 -153435596 + L1 LINE L1 4301 4482 -1664 1906 130 3 20 chr2 99820987 99821286 -153435297 - AluSx SINE Alu -18 294 1 893 216 12 39 chr2 99821287 99821442 -153435141 - L1MB5 LINE L1 -835 5311 5164 2172 79 0 20 chr2 99821442 99821745 -153434838 - AluY SINE Alu -14 297 1 893 216 12 39 chr2 99821745 99821844 -153434739 - L1MB5 LINE L1 -982 5164 5064 1983 214 60 2 chr2 99821845 99822265 -153434318 - MER82 DNA MER2_type -203 450 7 2937 231 60 34 chr2 99822296 99823122 -153433461 + L1ME1 LINE L1 5313 6160 -6 282 31 0 0 chr2 99823152 99823184 -153433399 - AluY SINE Alu -16 284 253 21 0 0 0 chr2 99823574 99823595 -153432988 + GC_rich Low_complexity Low_complexity 1 21 0 310 185 54 87 chr2 99826563 99826655 -153429928 - MIR3 SINE MIR -39 169 81 2211 67 37 0 chr2 99826896 99827195 -153429388 + AluSq SINE Alu 1 310 -3 2326 91 0 0 chr2 99827985 99828293 -153428290 + AluSg SINE Alu 1 308 -2 1488 163 24 10 chr2 99828886 99829180 -153427403 - AluJo SINE Alu -14 298 1 426 235 306 11 chr2 99829471 99829654 -153426929 - MIR SINE MIR -8 254 18 3778 144 63 9 chr2 99829933 99830613 -153425970 - LTR62 LTR ERVK -2 717 1 1235 158 35 60 chr2 99830763 99831008 -153425575 - L1MB5 LINE L1 -1824 4322 4083 2182 94 3 0 chr2 99831008 99831307 -153425276 - AluSp SINE Alu -13 300 1 1235 158 35 60 chr2 99831307 99831346 -153425237 - L1MB5 LINE L1 -2063 4083 4045 1293 190 3 52 chr2 99831347 99831636 -153424947 - MLT1B LTR MaLR -115 275 1 396 59 0 0 chr2 99831727 99831778 -153424805 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 377 272 34 15 chr2 99832286 99832510 -153424073 - L1MC/D LINE L1 -720 5431 5283 240 302 35 0 chr2 99833069 99833155 -153423428 + MIR SINE MIR 155 243 -19 2228 87 0 0 chr2 99833423 99833722 -153422861 - AluSq SINE Alu -2 311 13 323 244 0 4 chr2 99833990 99834091 -153422492 + MER5A DNA MER1_type 1 111 -78 1215 235 99 31 chr2 99834168 99834717 -153421866 - MLT1E3 LTR MaLR -2 622 1 21 0 0 0 chr2 99835501 99835522 -153421061 + AT_rich Low_complexity Low_complexity 1 21 0 217 288 55 14 chr2 99837379 99837452 -153419131 - MIR3 SINE MIR -45 163 88 2308 76 0 3 chr2 99837695 99837998 -153418585 + AluY SINE Alu 1 302 -9 693 239 199 4 chr2 99838027 99838303 -153418280 + L1MB7 LINE L1 5855 6184 0 1765 120 73 54 chr2 99838424 99838980 -153417603 - MER4D LTR ERV1 -186 593 1 1100 261 65 96 chr2 99839257 99839885 -153416698 - MER21B LTR ERV1 -157 706 98 321 261 36 80 chr2 99839858 99839898 -153416685 - MER77 LTR ERV1 -408 197 157 * 3033 112 61 25 chr2 99839898 99840373 -153416210 - LTR22B LTR ERVK 0 492 1 321 261 36 80 chr2 99840373 99840470 -153416113 - MER77 LTR ERV1 -448 157 66 2166 109 6 3 chr2 99840475 99840787 -153415796 - AluSp SINE Alu 0 313 1 721 175 0 0 chr2 99840886 99841000 -153415583 - MER77-int LTR ERV1 -2 6799 6686 7915 226 37 22 chr2 99841102 99842899 -153413684 - MER77-int LTR ERV1 -380 6421 4597 319 114 0 0 chr2 99842899 99842943 -153413640 - MSTA LTR MaLR 0 428 385 1270 86 22 121 chr2 99842943 99843128 -153413455 - L1PB1 LINE L1 -14 6137 5978 2165 106 0 3 chr2 99843128 99843431 -153413152 - AluSg SINE Alu -8 302 1 1270 86 22 121 chr2 99843431 99843477 -153413106 - L1PB1 LINE L1 -173 5978 5929 1906 127 25 3 chr2 99843505 99843788 -153412795 - AluSx SINE Alu -23 289 1 21 36 0 0 chr2 99843799 99843827 -153412756 + AT_rich Low_complexity Low_complexity 1 28 0 2626 60 3 9 chr2 99843833 99844181 -153412402 - L1PA6 LINE L1 -3 6151 5806 694 147 21 1 chr2 99844209 99844343 -153412240 - MSTA LTR MaLR -218 147 1 4738 164 5 3 chr2 99844462 99845237 -153411346 - MSTA-int LTR MaLR -874 777 1 2118 154 118 8 chr2 99845237 99845619 -153410964 - MSTA LTR MaLR 0 428 5 2749 241 51 97 chr2 99845622 99846880 -153409703 - MER77-int LTR ERV1 -2191 4610 3411 1836 131 35 0 chr2 99846880 99847162 -153409421 + AluSx SINE Alu 1 292 -20 781 153 0 0 chr2 99847321 99847439 -153409144 + AluJb SINE Alu 194 311 -1 228 67 0 0 chr2 99847440 99847470 -153409113 + (GGAA)n Simple_repeat Simple_repeat 2 31 0 3249 194 41 8 chr2 99847470 99848177 -153408406 + L1MB8 LINE L1 4369 5098 -1048 771 202 5 54 chr2 99848175 99848398 -153408185 + L1MB8 LINE L1 5965 6176 -2 * 1188 132 44 19 chr2 99848513 99848546 -153408037 - L1MD1 LINE L1 -146 6096 6065 2076 136 26 15 chr2 99848546 99848885 -153407698 + MER2 DNA MER2_type 2 344 0 1188 132 44 19 chr2 99848885 99849056 -153407527 - L1MD1 LINE L1 -177 6065 5887 887 205 0 0 chr2 99849064 99849230 -153407353 - AluJb SINE Alu -13 299 134 3518 156 24 26 chr2 99849230 99849526 -153407057 - L1MD1 LINE L1 -351 5891 5596 2248 100 0 0 chr2 99849526 99849827 -153406756 - AluSg SINE Alu -9 301 1 3518 156 24 26 chr2 99849827 99850237 -153406346 - L1MD1 LINE L1 -646 5596 5189 2168 110 0 7 chr2 99850244 99850554 -153406029 - AluSx SINE Alu -4 308 1 633 181 48 36 chr2 99850657 99850767 -153405816 - L1MD1 LINE L1 -1195 4951 4837 2609 175 52 8 chr2 99850767 99851264 -153405319 - LTR53 LTR ERVL 0 519 1 633 181 48 36 chr2 99851264 99851319 -153405264 - L1MD1 LINE L1 -1309 4837 4784 1809 38 0 5 chr2 99851321 99851533 -153405050 + MER11C LTR ERVK 1 211 -860 2601 36 10 0 chr2 99851634 99851942 -153404641 + MER11C LTR ERVK 761 1071 0 2932 222 56 8 chr2 99851989 99852820 -153403763 - L1M4b LINE L1 -5924 935 2 862 310 25 16 chr2 99852822 99853141 -153403442 + ERVL LTR ERVL 1116 1437 -4327 668 159 0 48 chr2 99853149 99853338 -153403245 + CT-rich Low_complexity Low_complexity 1 180 0 549 138 0 0 chr2 99853376 99853463 -153403120 - AluS SINE Alu -3 309 223 362 281 12 0 chr2 99854051 99854133 -153402450 + MIR SINE MIR 60 142 -120 508 314 35 67 chr2 99854184 99854439 -153402144 - MIR SINE MIR -3 259 13 676 333 17 14 chr2 99854813 99855107 -153401476 - MLT1I LTR MaLR -45 364 70 270 236 79 11 chr2 99856477 99856566 -153400017 - MLT1I LTR MaLR -6 403 309 238 310 62 9 chr2 99856616 99856729 -153399854 - MLT1I LTR MaLR -198 211 93 653 150 10 0 chr2 99858967 99859067 -153397516 + Tigger4(Zombi) DNA MER2_type 25 125 -2606 329 320 44 15 chr2 99859073 99859276 -153397307 - L2 LINE L2 -1193 2121 1913 2053 133 0 13 chr2 99859475 99859790 -153396793 - AluSx SINE Alu -1 311 1 2991 30 6 14 chr2 99859826 99860188 -153396395 - L1PA4 LINE L1 -3 6152 5794 2193 97 3 3 chr2 99860191 99860491 -153396092 - AluSc SINE Alu -9 300 1 2286 105 0 0 chr2 99860814 99861120 -153395463 - AluSq SINE Alu -7 306 1 312 286 29 80 chr2 99861885 99862014 -153394569 + L2 LINE L2 2952 3061 -252 1906 122 58 3 chr2 99862014 99862308 -153394275 + AluSx SINE Alu 1 310 -2 312 286 29 80 chr2 99862308 99862454 -153394129 + L2 LINE L2 3061 3213 -100 2318 92 0 0 chr2 99862559 99862865 -153393718 + AluSg SINE Alu 1 306 -4 749 248 133 44 chr2 99862970 99863398 -153393185 + HAL1 LINE L1 1510 1975 -532 1347 143 27 0 chr2 99863403 99863627 -153392956 + AluJo SINE Alu 69 298 -14 414 277 80 42 chr2 99863738 99863976 -153392607 + HAL1 LINE L1 2030 2276 -231 746 154 62 0 chr2 99863995 99864125 -153392458 - BC200 scRNA scRNA -61 139 2 286 286 65 55 chr2 99864132 99864349 -153392234 + HAL1 LINE L1 2289 2507 0 1585 177 35 0 chr2 99865672 99865960 -153390623 - AluJo SINE Alu -10 302 5 248 318 38 30 chr2 99866251 99866383 -153390200 + MIR SINE MIR 82 214 -48 2057 106 3 0 chr2 99867400 99867724 -153388859 - AluSx SINE Alu 0 325 1 590 280 173 30 chr2 99867950 99868250 -153388333 + L2 LINE L2 2969 3311 -2 574 163 143 0 chr2 99868860 99868958 -153387625 + FLAM_C SINE Alu 10 121 -22 3214 203 18 77 chr2 99869204 99870234 -153386349 + LTR5 LTR ERVK 1 969 0 7906 67 4 20 chr2 99870647 99871671 -153384912 + LTR13 LTR ERVK 1 1007 0 250 338 118 15 chr2 99871864 99871971 -153384612 + L2 LINE L2 3164 3289 -24 2213 106 0 3 chr2 99871971 99872282 -153384301 - AluSg SINE Alu 0 310 1 250 338 118 15 chr2 99872282 99872310 -153384273 + L2 LINE L2 3289 3313 0 2706 265 63 2 chr2 99872379 99872884 -153383699 + L1MA2 LINE L1 5769 6304 0 1983 100 32 4 chr2 99872888 99873168 -153383415 - AluSc SINE Alu -21 288 1 680 269 18 12 chr2 99874222 99874393 -153382190 + MLT1J LTR MaLR 266 437 -74 263 298 57 24 chr2 99875958 99876082 -153380501 - LTR16C LTR ERVL -1 490 363 1793 247 191 49 chr2 99877256 99877771 -153378812 - L2 LINE L2 -94 3219 2779 198 71 0 0 chr2 99877771 99877799 -153378784 + (TGG)n Simple_repeat Simple_repeat 2 29 0 1793 247 191 49 chr2 99877799 99877839 -153378744 - L2 LINE L2 -534 2779 2746 2086 109 0 10 chr2 99877839 99878142 -153378441 + AluSc SINE Alu 1 300 -9 1793 247 191 49 chr2 99878142 99878543 -153378040 - L2 LINE L2 -567 2746 2112 552 261 97 0 chr2 99878544 99878678 -153377905 + MER5A DNA MER1_type 18 164 -25 3388 141 34 11 chr2 99878686 99879219 -153377364 + Tigger3b DNA MER2_type 2 546 -685 1607 132 12 4 chr2 99879220 99879478 -153377105 - AluSx SINE Alu -2 310 51 755 147 62 0 chr2 99879503 99879632 -153376951 + Tigger3b DNA MER2_type 753 889 -342 260 182 167 0 chr2 99879632 99879698 -153376885 + LOR1a LTR ERV1 1 77 -420 1987 96 0 7 chr2 99879698 99879989 -153376594 - AluY SINE Alu 0 311 23 899 161 60 45 chr2 99880089 99880288 -153376295 + L1MD2 LINE L1 6145 6346 -13 2807 236 145 6 chr2 99880314 99881409 -153375174 + ERVL LTR ERVL 3349 4597 -888 319 252 29 19 chr2 99882573 99882676 -153373907 + MIR3 SINE MIR 81 184 -24 288 221 8 150 chr2 99882856 99882983 -153373600 + MER46C DNA MER2_type 2 110 -228 2237 82 13 0 chr2 99883016 99883322 -153373261 - AluSg SINE Alu 0 310 1 466 311 75 6 chr2 99883386 99883547 -153373036 - MIR SINE MIR -70 192 21 3570 146 59 79 chr2 99883555 99884110 -153372473 - L1MB7 LINE L1 -9 6175 5610 1551 133 8 8 chr2 99884110 99884365 -153372218 - AluJo SINE Alu -45 267 13 3570 146 59 79 chr2 99884365 99884530 -153372053 - L1MB7 LINE L1 -574 5610 5443 1537 207 0 7 chr2 99884530 99884830 -153371753 - AluJo SINE Alu -14 298 1 3570 146 59 79 chr2 99884830 99885466 -153371117 - L1MB7 LINE L1 -741 5443 4835 282 367 104 22 chr2 99885591 99886052 -153370531 - L2 LINE L2 -348 2966 2468 46 78 0 0 chr2 99886892 99886994 -153369589 + AT_rich Low_complexity Low_complexity 1 102 0 2256 83 3 3 chr2 99886999 99887299 -153369284 + AluSg SINE Alu 1 300 -10 230 277 0 15 chr2 99887563 99887628 -153368955 - L1MC4a LINE L1 -1873 5935 5872 188 286 54 0 chr2 99888468 99888524 -153368059 + L2 LINE L2 2435 2493 -821 250 225 84 0 chr2 99888593 99888664 -153367919 - MIR SINE MIR -77 185 109 724 236 153 0 chr2 99889187 99889390 -153367193 + MIR SINE MIR 8 241 -21 253 273 218 0 chr2 99891309 99891419 -153365164 + MIR SINE MIR 117 250 -12 237 132 0 0 chr2 99892178 99892216 -153364367 + (TTCTCC)n Simple_repeat Simple_repeat 5 42 0 190 29 57 29 chr2 99892558 99892593 -153363990 + (TTTTA)n Simple_repeat Simple_repeat 1 36 0 944 159 0 0 chr2 99892593 99892731 -153363852 - FRAM SINE Alu -30 146 9 256 385 0 8 chr2 99895459 99895576 -153361007 - L3 LINE CR1 -721 856 741 1252 245 43 23 chr2 99895649 99896000 -153360583 + L1ME3A LINE L1 5759 6116 -54 265 348 30 15 chr2 99895995 99896130 -153360453 + L1ME3A LINE L1 6034 6170 0 * 257 327 121 18 chr2 99896148 99896313 -153360270 - L3 LINE CR1 -957 620 439 321 239 109 35 chr2 99897152 99897336 -153359247 + MIR SINE MIR 33 226 -36 279 54 0 0 chr2 99898114 99898151 -153358432 + (TTTTG)n Simple_repeat Simple_repeat 3 39 0 1704 183 3 10 chr2 99898194 99898506 -153358077 + AluJb SINE Alu 1 310 -2 2209 107 14 0 chr2 99899584 99899873 -153356710 - AluSx SINE Alu -19 293 1 520 231 95 7 chr2 99899910 99900057 -153356526 - MIR SINE MIR -5 257 98 221 148 66 66 chr2 99900913 99900974 -153355609 - MIR SINE MIR -62 146 86 1704 175 4 7 chr2 99903341 99903615 -153352968 + AluJo SINE Alu 20 292 -20 328 227 125 0 chr2 99903719 99903807 -153352776 + MIR SINE MIR 79 177 -85 2588 63 0 0 chr2 99905494 99905794 -153350789 - AluY SINE Alu -10 301 2 1023 130 0 6 chr2 99906432 99906792 -153349791 + (TGAG)n Simple_repeat Simple_repeat 1 359 0 2262 84 0 3 chr2 99907267 99907580 -153349003 - AluY SINE Alu 0 312 1 2551 65 0 3 chr2 99907746 99908052 -153348531 - AluY SINE Alu -6 305 1 183 156 0 0 chr2 99908371 99908403 -153348180 + (TATATG)n Simple_repeat Simple_repeat 3 34 0 2321 100 0 3 chr2 99908409 99908708 -153347875 + AluSq SINE Alu 1 298 -15 379 239 103 19 chr2 99908889 99909044 -153347539 + L1ME4a LINE L1 5805 5972 -149 1647 189 28 0 chr2 99909969 99910254 -153346329 - AluJo SINE Alu -19 293 1 957 276 9 0 chr2 99911152 99911369 -153345214 - MER58A DNA MER1_type -3 221 3 22 88 0 0 chr2 99911541 99911598 -153344985 + AT_rich Low_complexity Low_complexity 1 57 0 24 32 0 0 chr2 99911836 99911867 -153344716 + AT_rich Low_complexity Low_complexity 1 31 0 639 260 23 63 chr2 99911886 99912186 -153344397 - L1MC4a LINE L1 -1874 5934 5647 24 0 0 0 chr2 99912335 99912359 -153344224 + AT_rich Low_complexity Low_complexity 1 24 0 235 276 13 0 chr2 99912827 99912903 -153343680 + MER103 DNA DNA 71 147 -19 2202 83 21 3 chr2 99915088 99915378 -153341205 - AluY SINE Alu -16 295 1 457 214 15 46 chr2 99915487 99915618 -153340965 + MER104 DNA Tc2 1 127 -53 327 261 45 32 chr2 99916260 99916571 -153340012 + L1ME4a LINE L1 5708 6047 -74 1758 187 10 3 chr2 99917444 99917738 -153338845 - AluJo SINE Alu -16 296 1 1806 168 30 24 chr2 99917951 99918248 -153338335 - AluJo SINE Alu -13 299 1 455 113 0 153 chr2 99918661 99918718 -153337865 + L1MC5 LINE L1 7603 7625 -336 2265 120 0 0 chr2 99918718 99919018 -153337565 - AluSq SINE Alu -13 300 1 455 113 0 153 chr2 99919018 99919110 -153337473 + L1MC5 LINE L1 7625 7729 -232 260 319 0 0 chr2 99920009 99920078 -153336505 - L2 LINE L2 -10 3303 3235 992 158 88 46 chr2 99920498 99920782 -153335801 + MER33 DNA MER1_type 1 296 -28 2875 10 0 0 chr2 99921215 99921520 -153335063 - AluYa5 SINE Alu -6 305 1 32689 84 18 11 chr2 99922109 99926856 -153329727 - L1P LINE L1 -1358 4788 11 309 238 48 12 chr2 99927232 99927316 -153329267 + MER103 DNA DNA 79 165 -1 592 285 136 40 chr2 99928041 99928572 -153328011 - L2 LINE L2 -29 3284 2641 190 295 96 6 chr2 99928594 99928750 -153327833 - L2 LINE L2 -1212 2102 1933 2437 76 0 16 chr2 99929227 99929542 -153327041 - AluSg SINE Alu 0 310 1 369 283 17 8 chr2 99929607 99929727 -153326856 - MER104 DNA Tc2 0 180 60 1006 211 72 58 chr2 99929995 99930464 -153326119 - L1MC5 LINE L1 -183 7778 7303 226 97 0 0 chr2 99931378 99931409 -153325174 - L1M4 LINE L1 -581 5987 5957 839 162 84 7 chr2 99931458 99931705 -153324878 - L1M4 LINE L1 -739 5839 5581 1233 185 48 31 chr2 99931729 99932080 -153324503 - L1M4 LINE L1 -4989 1551 1195 1290 207 59 3 chr2 99934354 99934659 -153321924 - L1MB8 LINE L1 0 6178 5857 216 253 59 46 chr2 99935246 99935386 -153321197 + MIR SINE MIR 41 180 -68 299 230 35 58 chr2 99936319 99936406 -153320177 - MER5B DNA MER1_type -6 172 88 252 86 0 0 chr2 99936631 99936666 -153319917 + (TCTCC)n Simple_repeat Simple_repeat 4 38 0 419 210 101 65 chr2 99937074 99937212 -153319371 + MIR SINE MIR 14 156 -106 472 275 3 3 chr2 99938354 99938663 -153317920 + (TG)n Simple_repeat Simple_repeat 1 309 0 1185 84 10 5 chr2 99939009 99939415 -153317168 + (CTCA)n Simple_repeat Simple_repeat 1 408 0 377 258 86 26 chr2 99939936 99940087 -153316496 - MIR3 SINE MIR -19 189 30 1593 153 10 119 chr2 99940125 99940425 -153316158 - L1MD2 LINE L1 -7 6352 6102 2177 147 0 0 chr2 99940425 99940732 -153315851 + 7SLRNA srpRNA srpRNA 1 307 -13 1593 153 10 119 chr2 99940732 99940818 -153315765 - L1MD2 LINE L1 -257 6102 6008 762 133 0 16 chr2 99940840 99940968 -153315615 - FLAM_C SINE Alu -7 126 1 1086 163 6 0 chr2 99941112 99941278 -153315305 - AluSg/x SINE Alu -14 298 132 26 30 0 0 chr2 99941782 99941815 -153314768 + AT_rich Low_complexity Low_complexity 1 33 0 255 114 0 0 chr2 99943254 99943298 -153313285 + (TG)n Simple_repeat Simple_repeat 1 44 0 1950 138 3 0 chr2 99944998 99945287 -153311296 + AluSq SINE Alu 23 312 -1 712 165 81 26 chr2 99946324 99946576 -153310007 - MLT1B LTR MaLR -2 372 1 2728 226 39 45 chr2 99947024 99947737 -153308846 - MER21B LTR ERV1 -107 756 48 1292 99 86 0 chr2 99948028 99948250 -153308333 + LTR56 LTR ERV1 27 267 -178 342 277 42 0 chr2 99950609 99950728 -153305855 + MER69 DNA AcHobo 11 134 -2392 538 143 16 31 chr2 99950836 99951079 -153305504 + AluJb SINE Alu 2 303 -9 423 322 40 7 chr2 99951083 99951232 -153305351 + MIR SINE MIR 28 181 -81 505 189 21 1 chr2 99951343 99951452 -153305131 - MLT1C LTR MaLR -1 466 369 2555 52 0 0 chr2 99952276 99952565 -153304018 - AluY SINE Alu -14 297 9 259 164 66 0 chr2 99952660 99952721 -153303862 - MIR SINE MIR -106 156 92 372 274 17 9 chr2 99952766 99952897 -153303686 + MIR SINE MIR 9 139 -69 1853 179 0 13 chr2 99953565 99953867 -153302716 + AluJo SINE Alu 1 298 -14 482 274 151 12 chr2 99954003 99954248 -153302335 - MLT1L LTR MaLR -10 605 327 1825 214 112 13 chr2 99954281 99954753 -153301830 + LTR53 LTR ERVL 1 519 0 228 356 51 0 chr2 99954771 99954889 -153301694 + L2 LINE L2 3183 3306 -7 249 313 0 0 chr2 99954919 99955002 -153301581 - MLT1L LTR MaLR -386 229 147 1870 211 27 29 chr2 99955117 99955567 -153301016 + MER74C LTR ERVL 12 460 0 749 322 10 0 chr2 99955956 99956161 -153300422 + HERVL74 LTR ERVL 414 620 -5065 2061 203 67 2 chr2 99956167 99956615 -153299968 + HERVL74 LTR ERVL 2256 2732 -2953 2220 100 30 0 chr2 99957149 99957449 -153299134 + AluSx SINE Alu 1 309 -3 1068 151 0 35 chr2 99957465 99957637 -153298946 + AluJo SINE Alu 2 167 -145 575 283 51 6 chr2 99958524 99958701 -153297882 - MIR SINE MIR -12 250 66 524 163 0 0 chr2 99958708 99958824 -153297759 - AluJb SINE Alu 0 307 192 1963 178 8 8 chr2 99962538 99962903 -153293680 + MLT1A1 LTR MaLR 1 365 0 236 259 12 25 chr2 99963511 99963592 -153292991 + L2 LINE L2 2994 3073 -199 281 281 150 39 chr2 99963743 99963896 -153292687 - MER5A DNA MER1_type -6 183 14 186 310 14 14 chr2 99963924 99963995 -153292588 + MIR SINE MIR 35 105 -103 601 214 38 6 chr2 99965937 99966096 -153290487 - L1ME1 LINE L1 -121 6045 5882 1531 112 0 0 chr2 99966129 99966335 -153290248 + AluSg/x SINE Alu 105 310 -2 2090 91 33 0 chr2 99966345 99966644 -153289939 + AluSp SINE Alu 1 308 0 795 197 64 22 chr2 99966644 99966876 -153289707 + MLT1G LTR MaLR 166 424 -118 2028 151 74 20 chr2 99966876 99967279 -153289304 - MSTB LTR MaLR 0 426 2 795 197 64 22 chr2 99967279 99967392 -153289191 + MLT1G LTR MaLR 424 531 -11 348 267 50 8 chr2 99967552 99967672 -153288911 + L1MEd LINE L1 11 135 -5984 1746 173 7 3 chr2 99967704 99967987 -153288596 + AluJb SINE Alu 1 284 -28 1412 180 63 9 chr2 99968737 99969070 -153287513 + L1MA3 LINE L1 5955 6305 0 340 232 320 0 chr2 99969174 99969299 -153287284 + MER5B DNA MER1_type 1 165 -13 211 355 105 16 chr2 99970565 99970813 -153285770 - L2 LINE L2 -578 2736 2467 2675 42 0 10 chr2 99971286 99971599 -153284984 + AluY SINE Alu 1 310 -1 2373 100 3 0 chr2 99971630 99971929 -153284654 + AluSq SINE Alu 1 300 -13 2449 78 0 3 chr2 99972211 99972507 -153284076 + AluSc SINE Alu 3 297 -12 2142 114 17 0 chr2 99973537 99973834 -153282749 + AluSx SINE Alu 1 302 -10 715 298 32 20 chr2 99973901 99974149 -153282434 - MIR SINE MIR -11 251 1 211 384 113 6 chr2 99975104 99975268 -153281315 + L2 LINE L2 2331 2476 -838 2362 102 0 13 chr2 99975268 99975581 -153281002 - AluSg SINE Alu -1 309 1 211 384 113 6 chr2 99975581 99975744 -153280839 + L2 LINE L2 2476 2693 -621 2058 209 43 29 chr2 99975755 99976309 -153280274 - MER68 LTR ERV1 0 562 1 446 257 158 18 chr2 99976332 99976503 -153280080 - L1ME4a LINE L1 -1 6120 5926 2338 120 0 0 chr2 99976528 99976837 -153279746 - AluSx SINE Alu -3 309 1 409 272 62 103 chr2 99977010 99977253 -153279330 - L1ME4a LINE L1 -210 5952 5720 238 324 10 0 chr2 99977256 99977358 -153279225 - L1ME4a LINE L1 -1250 4896 4794 424 235 121 15 chr2 99977459 99977591 -153278992 + MIR SINE MIR 117 262 0 2320 98 0 7 chr2 99977602 99977909 -153278674 - AluSc SINE Alu -4 305 1 304 215 151 54 chr2 99977909 99978002 -153278581 - L1ME LINE L1 -295 5826 5725 308 175 62 12 chr2 99978008 99978088 -153278495 + MIR SINE MIR 172 255 -7 324 157 100 0 chr2 99978135 99978205 -153278378 - L1ME LINE L1 -459 5662 5586 842 118 0 22 chr2 99978940 99979075 -153277508 - FLAM_C SINE Alu -1 132 1 223 286 13 52 chr2 99980739 99980816 -153275767 - MIR3 SINE MIR -3 205 132 1034 215 13 40 chr2 99980831 99981133 -153275450 + L1MC4 LINE L1 7709 8002 -40 553 266 45 14 chr2 99982601 99982842 -153273741 + L1MC4a LINE L1 5632 5818 -303 2399 108 0 0 chr2 99982885 99983192 -153273391 - AluSx SINE Alu -5 307 1 2411 86 3 3 chr2 99983538 99983840 -153272743 - AluSx SINE Alu -10 302 1 777 321 16 0 chr2 99985611 99985860 -153270723 - MIR SINE MIR -2 260 8 314 217 233 8 chr2 99985877 99986006 -153270577 + L2 LINE L2 3154 3311 -2 269 247 141 12 chr2 99986296 99986381 -153270202 - MLT1J2 LTR MaLR -245 205 110 2678 59 0 0 chr2 99986647 99986953 -153269630 - AluY SINE Alu -5 306 1 2011 116 0 35 chr2 100037541 100037851 -153218732 - AluSx SINE Alu -13 299 1 1604 188 72 36 chr2 100038182 100038328 -153218255 - MER6A DNA MER2_type -491 374 235 252 0 0 0 chr2 100038328 100038356 -153218227 + (CA)n Simple_repeat Simple_repeat 2 29 0 1604 188 72 36 chr2 100038356 100038570 -153218013 - MER6A DNA MER2_type -630 235 1 1151 235 21 11 chr2 100039459 100039740 -153216843 - LTR42 LTR ERVL -23 472 189 596 111 12 0 chr2 100039741 100039822 -153216761 - AluSg/x SINE Alu -20 292 211 462 232 22 7 chr2 100039883 100040021 -153216562 - MLT1D LTR MaLR 0 505 366 8828 219 74 25 chr2 100040764 100043216 -153213367 - L1MDa LINE L1 -830 5710 3080 1855 77 61 0 chr2 100043216 100043462 -153213121 + AluY SINE Alu 39 299 -12 8828 219 74 25 chr2 100043462 100044016 -153212567 - L1MDa LINE L1 -3460 3080 2555 273 330 0 0 chr2 100044048 100044148 -153212435 + T-rich Low_complexity Low_complexity 1 100 0 600 204 44 11 chr2 100044151 100044332 -153212251 - L1M1 LINE L1 -4074 3491 3305 875 158 0 14 chr2 100044332 100044478 -153212105 + AluJb SINE Alu 163 306 -6 332 263 0 0 chr2 100044530 100044606 -153211977 - L1ME4a LINE L1 -70 6051 5976 21 0 0 0 chr2 100045744 100045765 -153210818 + AT_rich Low_complexity Low_complexity 1 21 0 1313 216 65 24 chr2 100046422 100046793 -153209790 - MLT1B LTR MaLR -2 388 3 396 286 42 0 chr2 100047979 100048098 -153208485 + MIR SINE MIR 79 202 -60 1763 101 16 12 chr2 100048573 100048820 -153207763 + AluSg1 SINE Alu 44 291 -18 350 191 0 48 chr2 100049322 100049406 -153207177 - HsTC2 DNA Tc2 0 1900 1821 270 295 100 50 chr2 100049448 100049709 -153206874 + L1MEd LINE L1 353 626 -5493 314 248 20 20 chr2 100049721 100049822 -153206761 - HsTC2 DNA Tc2 -1794 104 4 368 315 122 11 chr2 100051507 100051688 -153204895 - L3 LINE CR1 -70 1507 1307 270 307 65 68 chr2 100052562 100052871 -153203712 - L3 LINE CR1 -119 1458 1151 1092 176 0 26 chr2 100052937 100053130 -153203453 - AluSx SINE Alu -124 188 1 507 221 103 0 chr2 100053854 100053999 -153202584 + LOR1b LTR ERV1 29 188 -273 971 201 75 0 chr2 100054007 100054221 -153202362 + LOR1a LTR ERV1 268 497 0 2219 90 3 7 chr2 100055502 100055803 -153200780 - AluSq SINE Alu -13 300 1 2108 118 0 3 chr2 100056010 100056299 -153200284 - AluSc SINE Alu -7 302 15 516 215 0 0 chr2 100056904 100056997 -153199586 - AluJ/FLAM SINE Alu -210 102 10 1492 206 15 6 chr2 100057013 100057353 -153199230 - L1M3 LINE L1 -361 5822 5480 2077 93 10 42 chr2 100057514 100057824 -153198759 + AluSg SINE Alu 1 300 -10 22037 49 5 0 chr2 100059410 100063007 -153193576 + L1PA5 LINE L1 2524 6148 -6 460 311 86 60 chr2 100063036 100063422 -153193161 + L1ME1 LINE L1 5766 6161 -5 223 350 0 29 chr2 100065666 100065806 -153190777 + GA-rich Low_complexity Low_complexity 33 168 0 232 228 22 82 chr2 100065927 100066111 -153190472 + (GGGTG)n Simple_repeat Simple_repeat 4 176 0 685 216 27 0 chr2 100066426 100066574 -153190009 - MLT1D LTR MaLR -311 194 43 559 246 153 16 chr2 100066708 100066956 -153189627 + MLT1D LTR MaLR 65 346 -159 508 298 27 48 chr2 100067493 100067681 -153188902 + MER91B DNA MER1_type 1 184 -6 575 311 121 22 chr2 100067814 100068575 -153188008 + L1MEc LINE L1 92 927 -5469 1582 202 92 26 chr2 100068637 100069212 -153187371 + L1MC4a LINE L1 5879 6491 -1317 3112 224 119 19 chr2 100069700 100070202 -153186381 + L1MC4 LINE L1 6492 6942 -1100 2004 135 3 3 chr2 100070202 100070499 -153186084 + AluSx SINE Alu 1 297 -15 3112 224 119 19 chr2 100070499 100071075 -153185508 + L1MC4 LINE L1 6942 7678 -364 1123 264 101 39 chr2 100071072 100071763 -153184820 + L1M4 LINE L1 2814 3460 -2686 * 1478 209 64 3 chr2 100071763 100072107 -153184476 + MER47A DNA MER2_type 1 365 -1 1123 264 101 39 chr2 100072107 100072153 -153184430 + L1M4 LINE L1 3460 3502 -2644 2278 107 3 3 chr2 100072153 100072463 -153184120 + AluSp SINE Alu 1 310 -3 1123 264 101 39 chr2 100072463 100072711 -153183872 + L1M4 LINE L1 3502 3862 -2284 318 195 13 13 chr2 100072719 100072796 -153183787 + L1ME1 LINE L1 6086 6162 -4 459 332 84 13 chr2 100073964 100074262 -153182321 - L1ME4a LINE L1 -157 5964 5646 4584 128 28 17 chr2 100074281 100074902 -153181681 - L1PA15 LINE L1 0 6165 5531 3899 155 109 13 chr2 100074902 100075656 -153180927 - LTR1B LTR ERV1 0 826 1 4584 128 28 17 chr2 100075656 100075844 -153180739 - L1PA15 LINE L1 -634 5531 5347 347 134 75 0 chr2 100075892 100075959 -153180624 - LTR1B LTR ERV1 -328 498 427 1268 189 75 3 chr2 100075959 100076308 -153180275 - L1PA15 LINE L1 -809 5337 4964 2136 169 111 23 chr2 100076308 100079149 -153177434 - SATR1 Satellite Satellite 0 3092 1 1885 184 121 3 chr2 100079163 100080147 -153176436 + SATR1 Satellite Satellite 1 1100 -105 271 98 33 0 chr2 100080311 100080372 -153176211 + (TA)n Simple_repeat Simple_repeat 2 64 0 887 176 19 56 chr2 100083132 100083177 -153173406 + SATR1 Satellite Satellite 142 187 -283 2398 88 0 0 chr2 100083177 100083485 -153173098 - AluY SINE Alu -3 308 1 887 176 19 56 chr2 100083485 100083655 -153172928 + SATR1 Satellite Satellite 187 349 -121 2040 129 7 3 chr2 100083796 100084090 -153172493 - AluSx SINE Alu -17 295 1 1983 269 54 40 chr2 100084638 100084922 -153171661 - MER21B LTR ERV1 -57 806 528 1823 170 3 10 chr2 100084922 100085216 -153171367 - AluJo SINE Alu -12 300 9 1983 269 54 40 chr2 100085216 100085294 -153171289 - MER21B LTR ERV1 -335 528 453 1267 194 28 81 chr2 100085294 100085614 -153170969 + AluJb SINE Alu 2 304 -8 1983 269 54 40 chr2 100085614 100086026 -153170557 - MER21B LTR ERV1 -410 453 20 1480 223 13 10 chr2 100086123 100086424 -153170159 - AluJo SINE Alu -10 302 1 537 221 15 22 chr2 100086426 100086562 -153170021 - FLAM_C SINE Alu 0 143 9 1450 171 22 61 chr2 100086565 100086927 -153169656 + MLT1D LTR MaLR 150 497 -8 1326 209 22 35 chr2 100086936 100087247 -153169336 + AluJo SINE Alu 1 307 -5 1120 260 87 18 chr2 100087251 100087777 -153168806 - L2 LINE L2 -216 3097 2541 685 171 8 16 chr2 100087865 100087988 -153168595 + FLAM_C SINE Alu 1 122 -21 795 206 0 58 chr2 100088122 100088311 -153168272 + AluJo SINE Alu 1 178 -134 989 218 39 8 chr2 100088313 100088547 -153168036 + AluJo SINE Alu 46 286 -26 235 186 10 98 chr2 100088711 100088813 -153167770 + LTR37A LTR ERV1 241 333 -93 2079 134 3 0 chr2 100089010 100089308 -153167275 - AluSg SINE Alu -11 299 1 1442 197 3 30 chr2 100089614 100089914 -153166669 - AluJo SINE Alu -10 302 11 1995 148 0 7 chr2 100089929 100090233 -153166350 - AluSx SINE Alu -10 302 1 2054 218 49 67 chr2 100090243 100090306 -153166277 - L1MB8 LINE L1 -5 6173 6110 1505 216 3 0 chr2 100090306 100090602 -153165981 + AluJb SINE Alu 1 297 -15 2054 218 49 67 chr2 100090602 100091168 -153165415 - L1MB8 LINE L1 -68 6110 5555 594 215 0 0 chr2 100091168 100091275 -153165308 + FLAM_A SINE Alu 1 107 -35 384 243 0 0 chr2 100091316 100091390 -153165193 - L1MB8 LINE L1 -598 5568 5495 1479 204 3 7 chr2 100091390 100091684 -153164899 - AluJb SINE Alu -19 293 1 210 250 0 0 chr2 100091752 100091812 -153164771 + T-rich Low_complexity Low_complexity 1 60 0 29 59 0 15 chr2 100091933 100091960 -153164623 + AT_rich Low_complexity Low_complexity 1 27 -40 502 165 10 10 chr2 100091960 100092057 -153164526 - L1PB1 LINE L1 -2 6149 6053 29 59 0 15 chr2 100092057 100092097 -153164486 + AT_rich Low_complexity Low_complexity 27 67 0 1663 163 11 0 chr2 100092360 100092643 -153163940 - AluSx SINE Alu -26 286 1 180 0 0 0 chr2 100093394 100093414 -153163169 + (A)n Simple_repeat Simple_repeat 1 20 0 1011 143 129 19 chr2 100093715 100093925 -153162658 - MER6 DNA MER2_type 0 865 633 1194 129 0 6 chr2 100093925 100094103 -153162480 + AluSx SINE Alu 1 177 -135 2176 163 112 17 chr2 100094228 100095395 -153161188 - SATR1 Satellite Satellite 0 1277 1 1473 181 23 58 chr2 100095417 100095813 -153160770 + MLT2B3 LTR ERVL 183 552 -2 261 122 20 20 chr2 100096784 100096855 -153159728 - AluSg/x SINE Alu -191 109 72 26 0 0 0 chr2 100097171 100097197 -153159386 + AT_rich Low_complexity Low_complexity 1 26 0 1048 161 85 30 chr2 100097352 100097657 -153158926 + MER33 DNA MER1_type 1 322 -2 2769 6 0 3 chr2 100097757 100098095 -153158488 - AluY SINE Alu 0 337 1 491 250 104 26 chr2 100100365 100100470 -153156113 - L1MC4 LINE L1 0 8042 7947 279 0 0 0 chr2 100100470 100100501 -153156082 + (CA)n Simple_repeat Simple_repeat 2 32 0 491 250 104 26 chr2 100100501 100100641 -153155942 - L1MC4 LINE L1 -95 7947 7819 2141 95 0 23 chr2 100100641 100100947 -153155636 + AluY SINE Alu 1 299 -12 491 250 104 26 chr2 100100947 100101011 -153155572 - L1MC4 LINE L1 -223 7819 7584 343 351 33 12 chr2 100101627 100101869 -153154714 - L1PA16 LINE L1 -21 6145 5899 636 178 96 22 chr2 100101899 100102034 -153154549 - AluSq SINE Alu -136 177 33 180 0 0 0 chr2 100103170 100103190 -153153393 + (T)n Simple_repeat Simple_repeat 1 20 0 2660 163 118 0 chr2 100104684 100105157 -153151426 + Tigger4(Zombi) DNA MER2_type 2 530 -2201 * 5046 106 49 26 chr2 100105156 100105959 -153150624 + Tigger4(Zombi) DNA MER2_type 1911 2731 0 3229 178 53 104 chr2 100106889 100107068 -153149515 - L1MB7 LINE L1 0 6184 5997 856 167 6 52 chr2 100107068 100107242 -153149341 - FRAM SINE Alu 0 166 1 3229 178 53 104 chr2 100107242 100107960 -153148623 - L1MB7 LINE L1 -187 5997 5339 2637 167 58 11 chr2 100107960 100108517 -153148066 - L1MC2 LINE L1 -1 6343 5761 3229 178 53 104 chr2 100108517 100108598 -153147985 - L1MB7 LINE L1 -845 5339 5255 3792 197 30 55 chr2 100108608 100109593 -153146990 + L1MB7 LINE L1 4282 5242 -904 4805 42 5 2 chr2 100109635 100110211 -153146372 - L1PA5 LINE L1 -1 6153 5576 368 171 0 40 chr2 100110348 100110442 -153146141 + AluJb SINE Alu 157 221 -81 414 57 0 0 chr2 100110551 100110604 -153145979 + (TG)n Simple_repeat Simple_repeat 2 54 0 882 199 6 6 chr2 100111675 100111841 -153144742 + AluJb SINE Alu 124 289 -23 599 149 215 0 chr2 100111916 100112037 -153144546 - MLT1D LTR MaLR -46 459 313 259 299 144 0 chr2 100114153 100114250 -153142333 + MIR SINE MIR 117 227 -35 205 244 0 0 chr2 100123048 100123093 -153133490 + C-rich Low_complexity Low_complexity 3 47 0 938 207 41 16 chr2 100124306 100124552 -153132031 - L1MC2 LINE L1 -639 5603 5352 2161 114 0 9 chr2 100126070 100126386 -153130197 - AluSq SINE Alu 0 313 1 184 56 0 56 chr2 100126516 100126552 -153130031 + (GGGAGA)n Simple_repeat Simple_repeat 1 34 0 563 223 77 28 chr2 100126552 100126746 -153129837 - MLT1B LTR MaLR -183 191 1 892 224 63 0 chr2 100126873 100127096 -153129487 - L1MCa LINE L1 -4857 1569 1333 4377 118 54 6 chr2 100129227 100129944 -153126639 - L1MA1 LINE L1 -5 6297 5546 1988 83 7 30 chr2 100130251 100130551 -153126032 + AluY SINE Alu 1 293 -18 369 0 0 0 chr2 100132699 100132740 -153123843 + (TG)n Simple_repeat Simple_repeat 1 41 0 1685 112 12 0 chr2 100132869 100133118 -153123465 + AluSx SINE Alu 45 296 -16 2078 89 3 51 chr2 100133174 100133487 -153123096 - AluSp SINE Alu -15 298 1 1198 272 70 16 chr2 100133804 100134351 -153122232 + L1ME2 LINE L1 5455 6030 -134 28 29 0 0 chr2 100136769 100136804 -153119779 + AT_rich Low_complexity Low_complexity 1 35 0 220 131 61 20 chr2 100136842 100136856 -153119727 + (TA)n Simple_repeat Simple_repeat 1 13 -90 1782 126 40 0 chr2 100136856 100137134 -153119449 - AluSx SINE Alu -23 289 1 220 131 61 20 chr2 100137134 100137218 -153119365 + (TA)n Simple_repeat Simple_repeat 13 103 0 333 252 68 54 chr2 100137432 100137579 -153119004 + L1ME LINE L1 5528 5676 -445 24 67 0 0 chr2 100138165 100138210 -153118373 + AT_rich Low_complexity Low_complexity 1 45 0 503 245 13 40 chr2 100138795 100138946 -153117637 - MER104 DNA Tc2 0 180 34 1481 173 42 7 chr2 100139044 100139328 -153117255 + AluJo SINE Alu 1 294 -18 546 264 148 46 chr2 100139336 100139560 -153117023 - MIR SINE MIR -15 247 4 251 287 87 52 chr2 100141216 100141331 -153115252 - MER5A DNA MER1_type 0 189 71 358 160 244 126 chr2 100141352 100141471 -153115112 + FLAM_A SINE Alu 1 133 0 233 269 0 0 chr2 100142698 100142750 -153113833 - L2 LINE L2 0 3272 3221 2252 112 14 0 chr2 100142842 100143137 -153113446 - AluSx SINE Alu -13 299 1 337 236 290 18 chr2 100143493 100143736 -153112847 - MER102b DNA MER1_type -3 338 29 259 254 31 31 chr2 100144051 100144181 -153112402 + GA-rich Low_complexity Low_complexity 2 131 0 22 56 0 0 chr2 100144804 100144840 -153111743 + AT_rich Low_complexity Low_complexity 1 36 0 2295 103 0 0 chr2 100146284 100146576 -153110007 - AluSc SINE Alu -16 293 2 183 156 0 0 chr2 100146626 100146658 -153109925 + (TTG)n Simple_repeat Simple_repeat 2 33 0 643 177 0 0 chr2 100147493 100147606 -153108977 - FLAM_C SINE Alu 0 143 31 21 0 0 0 chr2 100148427 100148448 -153108135 + AT_rich Low_complexity Low_complexity 1 21 0 540 226 0 0 chr2 100148564 100148670 -153107913 + U6 snRNA snRNA 1 106 -1 26 0 0 0 chr2 100149095 100149121 -153107462 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr2 100149979 100150001 -153106582 + AT_rich Low_complexity Low_complexity 1 22 0 25 51 0 0 chr2 100150229 100150268 -153106315 + AT_rich Low_complexity Low_complexity 1 39 0 2020 182 35 12 chr2 100150271 100150695 -153105888 - Tigger2a DNA MER2_type 0 434 1 237 291 0 0 chr2 100150948 100151003 -153105580 + (CA)n Simple_repeat Simple_repeat 2 56 0 874 170 0 0 chr2 100151309 100151444 -153105139 - FAM SINE Alu -29 156 22 1473 214 13 16 chr2 100151479 100151663 -153104920 - AluJb SINE Alu -9 303 119 219 36 0 0 chr2 100151663 100151691 -153104892 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1473 214 13 16 chr2 100151691 100151810 -153104773 - AluJb SINE Alu -193 119 1 2508 189 48 16 chr2 100152176 100152721 -153103862 - MER68 LTR ERV1 0 562 1 21 57 0 0 chr2 100152754 100152789 -153103794 + AT_rich Low_complexity Low_complexity 1 35 0 33 0 0 0 chr2 100153128 100153161 -153103422 + AT_rich Low_complexity Low_complexity 1 33 0 2103 136 7 3 chr2 100153280 100153590 -153102993 - AluSq SINE Alu -2 311 1 21 0 0 0 chr2 100153590 100153611 -153102972 + AT_rich Low_complexity Low_complexity 1 21 0 2052 138 0 3 chr2 100153651 100153947 -153102636 - AluSx SINE Alu -17 295 1 2389 164 0 39 chr2 100153955 100154413 -153102170 - L1MC1 LINE L1 0 6333 5894 829 142 45 0 chr2 100155432 100155566 -153101017 - Tigger7 DNA MER2_type 0 2487 2348 696 167 39 26 chr2 100155570 100155726 -153100857 + MER21A LTR ERV1 745 902 -29 635 219 0 24 chr2 100156167 100156290 -153100293 - FLAM_A SINE Alu -17 125 6 221 350 80 31 chr2 100156446 100156672 -153099911 - MIR SINE MIR -6 256 20 214 307 134 24 chr2 100157272 100157399 -153099184 - MIR SINE MIR -49 159 19 612 194 0 0 chr2 100159733 100159831 -153096752 + FLAM_A SINE Alu 2 99 -43 1695 122 12 103 chr2 100160088 100160238 -153096345 + AluSx SINE Alu 3 110 -202 216 0 0 0 chr2 100160238 100160262 -153096321 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1695 122 12 103 chr2 100160262 100160431 -153096152 + AluSx SINE Alu 110 293 -19 1142 213 35 57 chr2 100160617 100160899 -153095684 - AluJb SINE Alu -24 288 13 22 35 0 0 chr2 100160991 100161020 -153095563 + AT_rich Low_complexity Low_complexity 1 29 0 6216 58 1 0 chr2 100161268 100162042 -153094541 - L1PA5 LINE L1 -4 6150 5376 1586 199 0 7 chr2 100162427 100162709 -153093874 - AluJb SINE Alu -30 282 3 1395 226 0 24 chr2 100162743 100163039 -153093544 + AluJo SINE Alu 1 289 -23 2328 89 0 0 chr2 100163235 100163539 -153093044 + AluY SINE Alu 1 304 -7 281 171 195 12 chr2 100164395 100164477 -153092106 - MER5A DNA MER1_type -83 106 10 1820 176 0 0 chr2 100167599 100167905 -153088678 - AluSx SINE Alu -4 308 3 21 0 0 0 chr2 100168158 100168179 -153088404 + AT_rich Low_complexity Low_complexity 1 21 0 2088 116 7 0 chr2 100169658 100170017 -153086566 + AluSp SINE Alu 1 361 0 1908 166 7 0 chr2 100170449 100170751 -153085832 + AluSx SINE Alu 1 304 -8 206 225 0 0 chr2 100171051 100171091 -153085492 + L2 LINE L2 3262 3301 -12 1463 231 30 0 chr2 100171312 100171610 -153084973 - AluJo SINE Alu -5 307 1 26 30 0 0 chr2 100172316 100172349 -153084234 + AT_rich Low_complexity Low_complexity 1 33 0 580 69 23 0 chr2 100174351 100174438 -153082145 + L1PA5 LINE L1 6066 6154 0 24 53 0 0 chr2 100176116 100176154 -153080429 + AT_rich Low_complexity Low_complexity 1 38 0 2148 120 3 3 chr2 100176485 100176793 -153079790 - AluSq SINE Alu -5 308 1 558 293 73 4 chr2 100176907 100177139 -153079444 + L1MB7 LINE L1 5396 5643 -478 23 0 0 0 chr2 100178180 100178203 -153078380 + AT_rich Low_complexity Low_complexity 1 23 0 1125 232 36 13 chr2 100180202 100180512 -153076071 + L1MB7 LINE L1 5871 6184 0 410 302 54 13 chr2 100181232 100181381 -153075202 - L2 LINE L2 -438 2876 2722 1724 202 75 67 chr2 100182447 100182967 -153073616 - L1MB8 LINE L1 -2 6176 5653 203 233 50 0 chr2 100183978 100184038 -153072545 - MIR SINE MIR -2 260 198 1407 156 0 76 chr2 100184061 100184337 -153072246 + AluJb SINE Alu 38 292 -20 2034 151 0 0 chr2 100184755 100185053 -153071530 + AluSx SINE Alu 1 298 -14 2171 123 3 3 chr2 100185404 100185712 -153070871 + AluSg SINE Alu 2 309 -1 1987 118 66 0 chr2 100186967 100187256 -153069327 - AluSg SINE Alu -2 308 1 294 188 0 16 chr2 100187521 100187585 -153068998 + MER34C LTR ERV1 423 485 -100 24 32 0 0 chr2 100187592 100187623 -153068960 + AT_rich Low_complexity Low_complexity 1 31 0 1959 155 20 0 chr2 100188199 100188503 -153068080 + AluSq SINE Alu 1 310 -3 3232 126 22 0 chr2 100188879 100189371 -153067212 - L1PA10 LINE L1 -11 6157 5655 1246 214 96 30 chr2 100189466 100189830 -153066753 - MER4E LTR ERV1 -391 388 1 1193 198 84 28 chr2 100190061 100190384 -153066199 - L1MB8 LINE L1 -5 6173 5833 2073 153 75 7 chr2 100190384 100190796 -153065787 - MER61C LTR ERV1 0 434 11 2405 198 40 42 chr2 100190805 100191873 -153064710 - L1MB8 LINE L1 -342 5836 4766 800 301 83 20 chr2 100193197 100193576 -153063007 - MLT1G1 LTR MaLR -35 560 79 1248 175 88 0 chr2 100193612 100193886 -153062697 - L1MA5 LINE L1 -6 6294 5997 1045 229 31 8 chr2 100193953 100194211 -153062372 - AluJo SINE Alu -48 264 1 3109 203 35 14 chr2 100194219 100195330 -153061253 - L1MA5 LINE L1 -359 5941 4808 1210 219 14 17 chr2 100195443 100195735 -153060848 - AluJo SINE Alu -16 296 6 226 233 0 0 chr2 100197465 100197508 -153059075 + CT-rich Low_complexity Low_complexity 2 44 0 4583 37 7 0 chr2 100197883 100198430 -153058153 + L1PA4 LINE L1 5603 6153 -2 409 230 10 0 chr2 100198735 100198835 -153057748 - L1MA9 LINE L1 -49 6263 6163 1956 146 0 0 chr2 100199794 100200088 -153056495 - AluSg SINE Alu -16 294 1 1782 133 36 0 chr2 100200116 100200395 -153056188 + AluSg1 SINE Alu 1 289 -20 1849 150 17 0 chr2 100200586 100200880 -153055703 + AluSx SINE Alu 1 299 -13 4548 181 26 20 chr2 100200916 100202051 -153054532 + L1PA16 LINE L1 5026 6166 0 2187 118 0 0 chr2 100202236 100202540 -153054043 - AluSc SINE Alu -5 304 1 231 295 143 37 chr2 100203356 100203628 -153052955 + L2 LINE L2 2745 3045 -227 24 53 0 0 chr2 100204160 100204198 -153052385 + AT_rich Low_complexity Low_complexity 1 38 0 876 199 42 7 chr2 100204503 100204718 -153051865 - L1MC4 LINE L1 -680 7362 7112 810 232 22 0 chr2 100204761 100204942 -153051641 - L1MC4 LINE L1 -1039 7003 6819 330 203 43 24 chr2 100205499 100205666 -153050917 - HSAT5 Satellite Satellite 0 170 1 286 218 13 26 chr2 100205868 100205946 -153050637 - HSAT5 Satellite Satellite -1 85 9 259 213 18 35 chr2 100205957 100206053 -153050530 - HSAT5 Satellite Satellite 0 94 1 180 231 0 0 chr2 100206452 100206504 -153050079 + (CA)n Simple_repeat Simple_repeat 2 53 0 1888 122 92 48 chr2 100206748 100207184 -153049399 - SN5 Other centromeric 0 455 1 1407 254 51 3 chr2 100209130 100209481 -153047102 + MSTA LTR MaLR 1 368 -60 1332 175 16 0 chr2 100209498 100209744 -153046839 + MSTA-int LTR MaLR 1 250 -1401 1143 176 45 20 chr2 100209741 100209986 -153046597 + MSTA-int LTR MaLR 1401 1651 0 * 1539 222 32 27 chr2 100209986 100210360 -153046223 + MSTA LTR MaLR 1 376 -52 470 225 149 1 chr2 100210375 100210527 -153046056 - MST-int LTR MaLR -959 661 465 446 233 0 0 chr2 100210524 100210627 -153045956 + MSTA-int LTR MaLR 28 130 -1521 * 294 165 94 82 chr2 100210749 100210834 -153045749 + MSTA-int LTR MaLR 979 1064 -587 * 807 218 193 21 chr2 100210793 100211036 -153045547 - THE1-int LTR MaLR -389 1191 907 1233 220 59 7 chr2 100211040 100211326 -153045257 + MSTA LTR MaLR 76 376 -52 387 233 156 10 chr2 100211342 100211493 -153045090 - MST-int LTR MaLR -963 661 466 * 6058 222 68 22 chr2 100211490 100213045 -153043538 + MSTA-int LTR MaLR 27 1651 0 400 176 13 2 chr2 100213045 100213122 -153043461 + MSTA LTR MaLR 1 76 -356 240 179 36 18 chr2 100213224 100213280 -153043303 + THE1-int LTR MaLR 911 967 -613 * 746 232 195 17 chr2 100213268 100213509 -153043074 - THE1-int LTR MaLR -389 1191 908 877 244 78 14 chr2 100213514 100213797 -153042786 + MSTA LTR MaLR 76 376 -52 365 206 0 0 chr2 100213833 100213906 -153042677 + MSTA-int LTR MaLR 1579 1651 0 486 179 21 0 chr2 100213906 100214001 -153042582 + MSTA LTR MaLR 1 97 -331 1407 254 51 3 chr2 100215396 100215747 -153040836 + MSTA LTR MaLR 1 368 -60 1332 175 16 0 chr2 100215764 100216010 -153040573 + MSTA-int LTR MaLR 1 250 -1401 1143 176 45 20 chr2 100216007 100216252 -153040331 + MSTA-int LTR MaLR 1401 1651 0 * 1539 222 32 27 chr2 100216252 100216626 -153039957 + MSTA LTR MaLR 1 376 -52 470 225 149 1 chr2 100216641 100216793 -153039790 - MST-int LTR MaLR -959 661 465 446 233 0 0 chr2 100216790 100216893 -153039690 + MSTA-int LTR MaLR 28 130 -1521 * 294 165 94 82 chr2 100217015 100217100 -153039483 + MSTA-int LTR MaLR 979 1064 -587 * 807 218 193 21 chr2 100217059 100217302 -153039281 - THE1-int LTR MaLR -389 1191 907 1233 220 59 7 chr2 100217306 100217592 -153038991 + MSTA LTR MaLR 76 376 -52 387 233 156 10 chr2 100217608 100217759 -153038824 - MST-int LTR MaLR -963 661 466 * 5978 238 55 20 chr2 100217756 100219325 -153037258 + MSTA-int LTR MaLR 27 1650 -1 465 187 9 37 chr2 100219326 100219433 -153037150 + MSTA LTR MaLR 1 104 -324 387 214 107 0 chr2 100219518 100219602 -153036981 + MSTA LTR MaLR 75 167 -261 1479 204 12 47 chr2 100219605 100219949 -153036634 + MSTA-int LTR MaLR 1318 1649 -2 461 202 32 0 chr2 100219951 100220045 -153036538 + MSTA LTR MaLR 1 97 -331 710 244 184 21 chr2 100220195 100220429 -153036154 - THE1-int LTR MaLR -402 1178 907 1013 214 64 19 chr2 100220455 100220721 -153035862 + MSTA LTR MaLR 97 374 -54 431 182 36 13 chr2 100220739 100220852 -153035731 - MST-int LTR MaLR -963 661 506 6494 216 50 25 chr2 100220925 100222455 -153034128 + MSTA-int LTR MaLR 15 1583 -68 241 154 0 0 chr2 100222455 100222494 -153034089 + MST-int LTR MaLR 623 661 -990 383 167 0 0 chr2 100222528 100222588 -153033995 - MSTA LTR MaLR -52 376 317 341 167 13 13 chr2 100222590 100222668 -153033915 + MST-int LTR MaLR 1574 1651 0 434 196 20 10 chr2 100222668 100222770 -153033813 + MSTA LTR MaLR 1 103 -325 378 209 109 9 chr2 100222811 100222921 -153033662 + MSTA LTR MaLR 58 178 -250 1084 227 33 52 chr2 100222921 100223251 -153033332 + MSTA-int LTR MaLR 1328 1651 0 568 156 10 0 chr2 100223251 100223347 -153033236 + MSTA LTR MaLR 1 97 -331 225 204 56 0 chr2 100223432 100223486 -153033097 + THE1-int LTR MaLR 911 967 -613 * 833 206 174 43 chr2 100223441 100223717 -153032866 - THE1-int LTR MaLR -362 1218 907 1160 228 48 8 chr2 100223742 100224010 -153032573 + MSTA LTR MaLR 96 374 -54 413 212 154 10 chr2 100224028 100224182 -153032401 - MST-int LTR MaLR -963 661 463 * 6370 215 66 22 chr2 100224177 100225733 -153030850 + MSTA-int LTR MaLR 28 1651 0 667 218 28 73 chr2 100225733 100225912 -153030671 + MSTA LTR MaLR 1 171 -257 1209 217 16 38 chr2 100225918 100226236 -153030347 + MSTA-int LTR MaLR 1341 1651 0 441 176 19 46 chr2 100226236 100226344 -153030239 + MSTA LTR MaLR 1 105 -323 292 196 18 0 chr2 100226429 100226485 -153030098 + THE1-int LTR MaLR 911 967 -613 * 654 287 94 19 chr2 100226473 100226738 -153029845 - THE1-int LTR MaLR -389 1191 907 918 243 68 20 chr2 100226742 100227038 -153029545 + MSTA LTR MaLR 76 385 -43 573 193 161 10 chr2 100227046 100227199 -153029384 - MST-int LTR MaLR -963 661 463 * 6349 238 45 20 chr2 100227194 100228777 -153027806 + MSTA-int LTR MaLR 28 1651 0 435 237 21 0 chr2 100228777 100228874 -153027709 + MSTA LTR MaLR 1 99 -329 267 277 109 0 chr2 100228923 100229024 -153027559 + MSTA LTR MaLR 60 171 -257 1303 219 33 42 chr2 100229028 100229361 -153027222 + MST-int LTR MaLR 1322 1651 0 340 189 29 2 chr2 100229361 100229437 -153027146 + MSTA LTR MaLR 1 76 -356 249 179 36 18 chr2 100229540 100229596 -153026987 + THE1-int LTR MaLR 911 967 -613 * 602 261 183 17 chr2 100229584 100229825 -153026758 - MST-int LTR MaLR -395 1256 976 877 244 78 14 chr2 100229830 100230113 -153026470 + MSTA LTR MaLR 76 376 -52 365 206 0 0 chr2 100230149 100230222 -153026361 + MSTA-int LTR MaLR 1579 1651 0 486 179 21 0 chr2 100230222 100230317 -153026266 + MSTA LTR MaLR 1 97 -331 212 277 24 12 chr2 100230319 100230402 -153026181 + (GGGTG)n Simple_repeat Simple_repeat 4 87 0 278 232 18 0 chr2 100230413 100230469 -153026114 + THE1-int LTR MaLR 911 967 -613 * 903 201 189 20 chr2 100230457 100230701 -153025882 - THE1-int LTR MaLR -389 1191 907 940 239 81 25 chr2 100230705 100230990 -153025593 + MSTA LTR MaLR 76 376 -52 503 218 165 8 chr2 100231026 100231159 -153025424 - MST-int LTR MaLR -992 659 506 5872 231 43 43 chr2 100231162 100232780 -153023803 + MSTA-int LTR MaLR 34 1651 0 458 214 20 0 chr2 100232780 100232878 -153023705 + MSTA LTR MaLR 1 100 -328 230 286 132 0 chr2 100232925 100233016 -153023567 + MSTA LTR MaLR 65 167 -261 1442 216 0 40 chr2 100233019 100233367 -153023216 + MSTA-int LTR MaLR 1318 1651 0 468 200 21 0 chr2 100233367 100233462 -153023121 + MSTA LTR MaLR 1 97 -331 267 183 17 50 chr2 100233552 100233612 -153022971 + THE1-int LTR MaLR 910 967 -613 * 844 209 189 20 chr2 100233600 100233844 -153022739 - THE1-int LTR MaLR -389 1191 907 913 230 78 12 chr2 100233858 100234115 -153022468 + MSTA LTR MaLR 95 368 -60 438 188 181 8 chr2 100234157 100234290 -153022293 - MST-int LTR MaLR -990 661 506 * 5901 215 60 52 chr2 100234287 100235898 -153020685 + MSTA-int LTR MaLR 28 1651 0 425 224 20 10 chr2 100235898 100235996 -153020587 + MSTA LTR MaLR 1 99 -329 317 225 112 22 chr2 100236047 100236136 -153020447 + MSTA LTR MaLR 75 171 -257 1133 207 92 20 chr2 100236142 100236447 -153020136 + MSTA-int LTR MaLR 1325 1651 0 439 194 19 37 chr2 100236447 100236555 -153020028 + MSTA LTR MaLR 1 106 -322 851 206 170 43 chr2 100236646 100236923 -153019660 - THE1-int LTR MaLR -362 1218 907 569 237 131 66 chr2 100236927 100237125 -153019458 + MSTA LTR MaLR 75 285 -141 313 185 18 31 chr2 100237110 100237202 -153019381 - HSAT5 Satellite Satellite -1 90 1 * 384 207 0 18 chr2 100237434 100237536 -153019047 - HSAT5 Satellite Satellite -3 100 1 624 172 1 21 chr2 100237762 100238150 -153018433 - HSAT5 Satellite Satellite -1 380 1 281 258 82 10 chr2 100242360 100242457 -153014126 + MIR SINE MIR 45 148 -60 973 282 21 0 chr2 100242853 100243179 -153013404 + LTR16C LTR ERVL 130 462 -29 317 272 25 0 chr2 100243170 100243251 -153013332 + LTR16C LTR ERVL 409 491 0 * 364 324 0 0 chr2 100243302 100243413 -153013170 - MIR SINE MIR -122 140 30 496 320 131 14 chr2 100243564 100243786 -153012797 - MIR SINE MIR 0 262 15 2285 90 0 0 chr2 100243876 100244165 -153012418 + AluY SINE Alu 1 289 -22 444 266 46 6 chr2 100244423 100244596 -153011987 - LTR33 LTR ERVL -63 458 279 408 319 150 15 chr2 100245421 100245747 -153010836 + L2 LINE L2 2920 3289 -24 888 215 79 2 chr2 100245789 100246180 -153010403 + LTR46 LTR ERV1 1 460 0 396 307 23 8 chr2 100246181 100246320 -153010263 - MIR SINE MIR -51 157 18 180 0 0 0 chr2 100246689 100246709 -153009874 + (T)n Simple_repeat Simple_repeat 1 20 0 713 268 87 38 chr2 100246784 100247153 -153009430 + MLT1K LTR MaLR 200 586 -2 448 167 281 0 chr2 100247399 100247495 -153009088 - FLAM_C SINE Alu -20 123 1 861 144 0 0 chr2 100247545 100247719 -153008864 + (TG)n Simple_repeat Simple_repeat 2 175 0 606 162 0 0 chr2 100247740 100247876 -153008707 + (TG)n Simple_repeat Simple_repeat 1 136 0 236 209 30 0 chr2 100248402 100248469 -153008114 + (TG)n Simple_repeat Simple_repeat 2 70 0 244 309 0 24 chr2 100248479 100248563 -153008020 + MIR SINE MIR 161 242 -20 276 130 0 0 chr2 100248726 100248772 -153007811 + (CA)n Simple_repeat Simple_repeat 1 46 0 1532 164 24 41 chr2 100249406 100249699 -153006884 + AluJo SINE Alu 1 288 -24 21 0 0 0 chr2 100249699 100249720 -153006863 + AT_rich Low_complexity Low_complexity 1 21 0 3243 123 22 0 chr2 100251404 100251910 -153004673 - L1PB2 LINE L1 -4 6147 5631 1224 293 37 5 chr2 100252677 100253056 -153003527 - MER70A LTR ERVL -67 405 15 408 293 75 53 chr2 100253421 100253687 -153002896 + L1ME LINE L1 5352 5623 -547 792 122 16 0 chr2 100253712 100253834 -153002749 + MSTB LTR MaLR 1 124 -302 936 127 217 0 chr2 100253834 100253930 -153002653 + MER30 DNA MER1_type 1 75 -155 234 0 0 0 chr2 100253930 100253956 -153002627 + (CA)n Simple_repeat Simple_repeat 2 27 0 936 127 217 0 chr2 100253956 100254048 -153002535 + MER30 DNA MER1_type 75 230 0 * 1174 181 69 43 chr2 100254048 100254350 -153002233 + MSTB LTR MaLR 117 426 0 1344 204 7 48 chr2 100255089 100255383 -153001200 + AluJo SINE Alu 1 282 -30 231 301 48 41 chr2 100255587 100255733 -153000850 - L1MCc LINE L1 -6235 188 42 6159 128 21 20 chr2 100256344 100257312 -152999271 + LTR5 LTR ERVK 1 969 0 201 244 0 0 chr2 100257901 100257942 -152998641 + (TG)n Simple_repeat Simple_repeat 2 42 0 23 0 0 0 chr2 100257969 100257992 -152998591 + AT_rich Low_complexity Low_complexity 1 23 0 24 77 0 0 chr2 100258556 100258608 -152997975 + AT_rich Low_complexity Low_complexity 1 52 0 2285 103 0 29 chr2 100258716 100259028 -152997555 + AluY SINE Alu 1 303 -8 359 339 74 44 chr2 100259155 100259521 -152997062 - L2 LINE L2 -474 2840 2464 389 141 12 0 chr2 100261128 100261213 -152995370 + (TG)n Simple_repeat Simple_repeat 2 87 0 392 269 106 6 chr2 100262276 100262436 -152994147 - MER67D LTR ERV1 -114 400 225 37 0 0 0 chr2 100262447 100262484 -152994099 + AT_rich Low_complexity Low_complexity 1 37 0 1971 125 6 6 chr2 100262710 100263022 -152993561 + AluSx SINE Alu 1 312 0 201 154 0 0 chr2 100264840 100264879 -152991704 + (CA)n Simple_repeat Simple_repeat 1 39 0 2379 76 0 22 chr2 100265000 100265315 -152991268 + AluSg1 SINE Alu 1 308 -1 2028 109 7 0 chr2 100265449 100265723 -152990860 + AluSx SINE Alu 17 292 -20 30 59 0 0 chr2 100267851 100267902 -152988681 + AT_rich Low_complexity Low_complexity 1 51 0 576 298 138 9 chr2 100269835 100270060 -152986523 - MIR SINE MIR -8 254 1 632 250 14 0 chr2 100270163 100270311 -152986272 - MIR SINE MIR 0 262 113 400 308 54 38 chr2 100273058 100273243 -152983340 - MIR3 SINE MIR -16 192 5 23 0 0 0 chr2 100274244 100274267 -152982316 + AT_rich Low_complexity Low_complexity 1 23 0 259 239 80 0 chr2 100274520 100274608 -152981975 - HsTC2 DNA Tc2 -2 1896 1802 214 109 0 146 chr2 100275163 100275218 -152981365 - L2 LINE L2 0 3272 3226 2200 160 20 18 chr2 100275619 100276062 -152980521 + L1MA5 LINE L1 5622 6065 -235 22 0 0 0 chr2 100276719 100276741 -152979842 + AT_rich Low_complexity Low_complexity 1 22 0 2076 121 3 3 chr2 100277004 100277310 -152979273 - AluSx SINE Alu -6 306 1 33 43 0 0 chr2 100277527 100277574 -152979009 + AT_rich Low_complexity Low_complexity 1 47 0 409 283 101 0 chr2 100277586 100277745 -152978838 + MER67D LTR ERV1 226 400 -114 476 134 10 0 chr2 100278803 100278900 -152977683 + (CA)n Simple_repeat Simple_repeat 2 99 0 2213 209 44 9 chr2 100279463 100279990 -152976593 - Tigger3b DNA MER2_type -686 545 1 27 0 0 0 chr2 100280056 100280083 -152976500 + AT_rich Low_complexity Low_complexity 1 27 0 338 378 28 0 chr2 100280551 100280731 -152975852 + LTR33 LTR ERVL 77 261 -260 194 354 68 12 chr2 100281173 100281334 -152975249 - L2 LINE L2 -40 3273 3104 1180 255 127 19 chr2 100281371 100281790 -152974793 - MLT1C LTR MaLR 0 467 4 2377 161 21 36 chr2 100282427 100282949 -152973634 - L1MC2 LINE L1 -158 6186 5673 567 107 0 0 chr2 100283295 100283379 -152973204 + (TA)n Simple_repeat Simple_repeat 1 84 0 233 104 62 0 chr2 100283622 100283670 -152972913 + T-rich Low_complexity Low_complexity 3 53 0 1297 196 34 57 chr2 100283696 100284073 -152972510 + L1MCa LINE L1 1259 1703 -4723 1766 128 8 16 chr2 100284073 100284330 -152972253 - AluSc SINE Alu -54 255 1 1297 196 34 57 chr2 100284330 100284627 -152971956 + L1MCa LINE L1 1703 2005 -4421 1397 223 42 3 chr2 100284699 100285031 -152971552 - MLT1A1 LTR MaLR 0 365 21 709 239 65 33 chr2 100285094 100285400 -152971183 + L1MCa LINE L1 2161 2476 -3950 2286 37 0 7 chr2 100285479 100285751 -152970832 + AluY SINE Alu 26 295 -16 21 0 0 0 chr2 100286865 100286886 -152969697 + AT_rich Low_complexity Low_complexity 1 21 0 217 208 52 0 chr2 100287579 100287656 -152968927 + (CATATA)n Simple_repeat Simple_repeat 4 84 0 1621 164 46 48 chr2 100287834 100288206 -152968377 - THE1C LTR MaLR -1 374 4 25 51 0 0 chr2 100288342 100288381 -152968202 + AT_rich Low_complexity Low_complexity 1 39 0 950 181 72 20 chr2 100288632 100288958 -152967625 - MSTD LTR MaLR 0 396 5 5867 167 59 3 chr2 100290025 100291190 -152965393 + Tigger3b DNA MER2_type 1 1230 -1 405 215 102 90 chr2 100292366 100292544 -152964039 + MLT1E2 LTR MaLR 1 257 -397 5721 216 23 30 chr2 100292544 100292761 -152963822 - L1PA12 LINE L1 -4708 2873 2656 1828 156 56 14 chr2 100292761 100293121 -152963462 + THE1C LTR MaLR 1 375 0 5721 216 23 30 chr2 100293121 100294243 -152962340 - L1PA12 LINE L1 -4925 2656 1543 9396 220 16 34 chr2 100294251 100295532 -152961051 + L1PA15 LINE L1 1532 2751 -3395 3179 37 3 0 chr2 100295532 100295910 -152960673 + L1PA3 LINE L1 5771 6153 -2 9396 220 16 34 chr2 100295910 100297115 -152959468 + L1PA15 LINE L1 2751 3975 -2171 5441 126 21 13 chr2 100297116 100298729 -152957854 + L1PA15 LINE L1 4550 6165 0 1203 289 20 9 chr2 100298757 100299106 -152957477 + MLT1E2 LTR MaLR 225 577 -49 21 36 0 0 chr2 100299227 100299255 -152957328 + AT_rich Low_complexity Low_complexity 1 28 0 2051 111 3 17 chr2 100299978 100300275 -152956308 - AluSg SINE Alu -17 293 1 688 74 0 0 chr2 100301533 100301628 -152954955 - AluY SINE Alu -2 309 215 1716 31 0 0 chr2 100301629 100301823 -152954760 + AluY SINE Alu 2 195 -116 436 273 8 30 chr2 100302272 100302404 -152954179 - L1M4 LINE L1 -3345 2801 2673 5907 152 7 5 chr2 100302547 100302748 -152953835 + L1PB1 LINE L1 4815 5014 -1137 1825 142 14 7 chr2 100302748 100303062 -152953521 + AluSx SINE Alu 1 316 0 5907 152 7 5 chr2 100303062 100303824 -152952759 + L1PB1 LINE L1 5014 5783 -368 306 0 0 0 chr2 100303824 100303858 -152952725 + (TG)n Simple_repeat Simple_repeat 2 35 0 5907 152 7 5 chr2 100303858 100304222 -152952361 + L1PB1 LINE L1 5783 6145 -6 1008 308 109 47 chr2 100305000 100305865 -152950718 - L1MEc LINE L1 -1947 4994 4184 186 43 0 0 chr2 100305865 100305888 -152950695 + (TCCC)n Simple_repeat Simple_repeat 3 25 0 1008 308 109 47 chr2 100305888 100306193 -152950390 - L1MEc LINE L1 -2757 4184 3899 1155 145 15 0 chr2 100306193 100306393 -152950190 - L1PB3 LINE L1 -10 6144 5942 1008 308 109 47 chr2 100306393 100306445 -152950138 - L1MEc LINE L1 -3042 3899 3852 2565 39 3 3 chr2 100306445 100306754 -152949829 - AluY SINE Alu -2 309 1 1008 308 109 47 chr2 100306754 100307575 -152949008 - L1MEc LINE L1 -3089 3852 2859 22 0 0 0 chr2 100307752 100307774 -152948809 + AT_rich Low_complexity Low_complexity 1 22 0 302 279 122 40 chr2 100307804 100308211 -152948372 - L1MEc LINE L1 -4579 2543 2056 2159 92 10 14 chr2 100308211 100308525 -152948058 - AluSq SINE Alu 0 313 1 302 279 122 40 chr2 100308525 100308544 -152948039 - L1MEc LINE L1 -5066 2056 2040 24 0 0 0 chr2 100309510 100309534 -152947049 + AT_rich Low_complexity Low_complexity 1 24 0 26 30 0 0 chr2 100309709 100309742 -152946841 + AT_rich Low_complexity Low_complexity 1 33 0 2512 260 68 89 chr2 100310275 100311565 -152945018 - L1MEc LINE L1 -5150 1273 11 32 0 0 0 chr2 100312011 100312043 -152944540 + AT_rich Low_complexity Low_complexity 1 32 0 1306 258 15 19 chr2 100312117 100312586 -152943997 + L1M4 LINE L1 3144 3610 -2536 494 261 12 19 chr2 100313476 100313637 -152942946 - MLT2E LTR ERVL 0 628 469 881 341 11 3 chr2 100313668 100313952 -152942631 - MLT2E LTR ERVL -250 378 93 991 254 70 0 chr2 100314311 100314524 -152942059 + MER45C DNA AcHobo 5 232 -721 518 235 103 7 chr2 100314592 100314728 -152941855 + MER45C DNA AcHobo 711 859 -94 1419 147 4 17 chr2 100314932 100315164 -152941419 + MER30 DNA MER1_type 1 229 -1 22 0 0 0 chr2 100315419 100315441 -152941142 + AT_rich Low_complexity Low_complexity 1 22 0 247 374 0 9 chr2 100317813 100317928 -152938655 - MLT1J LTR MaLR -297 214 101 477 260 0 0 chr2 100317958 100318058 -152938525 + MER20 DNA MER1_type 119 218 -1 236 298 12 48 chr2 100318172 100318256 -152938327 + L3 LINE CR1 1243 1323 -254 23 0 0 0 chr2 100318890 100318913 -152937670 + AT_rich Low_complexity Low_complexity 1 23 0 2267 78 7 16 chr2 100321622 100321931 -152934652 + AluSc SINE Alu 1 306 -3 343 150 0 75 chr2 100322176 100322256 -152934327 + MER3 DNA MER1_type 135 208 -1 1537 114 4 24 chr2 100322763 100323018 -152933565 + L1PA13 LINE L1 5913 6162 -1 314 394 62 12 chr2 100323029 100323288 -152933295 - L2 LINE L2 -469 2845 2574 25 31 0 0 chr2 100323793 100323825 -152932758 + AT_rich Low_complexity Low_complexity 1 32 0 22 35 0 0 chr2 100324333 100324362 -152932221 + AT_rich Low_complexity Low_complexity 1 29 0 249 244 37 12 chr2 100325391 100325473 -152931110 + GA-rich Low_complexity Low_complexity 1 84 0 23 0 0 0 chr2 100325814 100325837 -152930746 + AT_rich Low_complexity Low_complexity 1 23 0 195 294 43 43 chr2 100325947 100326039 -152930544 - MIR SINE MIR -166 96 5 237 309 75 75 chr2 100326052 100326304 -152930279 + L2 LINE L2 2129 2380 -934 28 0 0 0 chr2 100326657 100326685 -152929898 + AT_rich Low_complexity Low_complexity 1 28 0 2074 121 0 0 chr2 100326757 100327062 -152929521 + AluSx SINE Alu 4 308 0 21 0 0 0 chr2 100327723 100327744 -152928839 + AT_rich Low_complexity Low_complexity 1 21 0 1259 241 85 3 chr2 100327763 100328082 -152928501 - MER2 DNA MER2_type 0 345 1 449 266 23 23 chr2 100328904 100329032 -152927551 - MER5B DNA MER1_type -1 177 50 2363 48 3 3 chr2 100329091 100329382 -152927201 - AluY SINE Alu -17 294 4 181 273 0 0 chr2 100329385 100329429 -152927154 - MER5B DNA MER1_type -134 44 1 505 257 34 67 chr2 100329964 100330024 -152926559 - MER5B DNA MER1_type -3 175 115 1985 132 0 22 chr2 100330024 100330343 -152926240 + AluSx SINE Alu 1 312 0 505 257 34 67 chr2 100330343 100330461 -152926122 - MER5B DNA MER1_type -63 115 3 684 243 28 23 chr2 100330479 100330656 -152925927 + MER5B DNA MER1_type 1 178 0 257 356 26 9 chr2 100330783 100330898 -152925685 + L2 LINE L2 2262 2378 -936 22 70 0 0 chr2 100332387 100332430 -152924153 + AT_rich Low_complexity Low_complexity 1 43 0 21 57 0 0 chr2 100333760 100333795 -152922788 + AT_rich Low_complexity Low_complexity 1 35 0 254 336 29 39 chr2 100335631 100335735 -152920848 - MIR3 SINE MIR -39 169 67 2041 126 89 15 chr2 100336586 100336912 -152919671 + THE1B LTR MaLR 15 364 0 10636 120 10 15 chr2 100336912 100337321 -152919262 + THE1B-int LTR MaLR 1 411 -1169 645 219 129 0 chr2 100337321 100337476 -152919107 + FAM SINE Alu 1 175 0 10636 120 10 15 chr2 100337476 100338648 -152917935 + THE1B-int LTR MaLR 411 1574 -6 2110 122 73 14 chr2 100338653 100338997 -152917586 + THE1B LTR MaLR 1 364 0 255 389 36 10 chr2 100339307 100339500 -152917083 + L3b LINE CR1 1246 1443 -140 24 32 0 0 chr2 100339502 100339533 -152917050 + AT_rich Low_complexity Low_complexity 1 31 0 1709 195 39 23 chr2 100340374 100340758 -152915825 - MLT1B LTR MaLR 0 390 1 241 207 23 92 chr2 100341564 100341651 -152914932 + MLT1L LTR MaLR 3 83 -532 333 325 56 20 chr2 100341997 100342194 -152914389 + MLT1L LTR MaLR 370 573 -42 309 350 7 22 chr2 100342403 100342540 -152914043 + L1MC4a LINE L1 4939 5073 -1073 269 132 0 0 chr2 100342652 100342690 -152913893 + U2 snRNA snRNA 2 39 -149 1884 88 18 100 chr2 100342858 100343197 -152913386 + AluYb8 SINE Alu 8 318 0 598 300 148 18 chr2 100343206 100343699 -152912884 + L1MC4a LINE L1 5357 5913 -1895 635 264 82 22 chr2 100344851 100345082 -152911501 + L1MC4 LINE L1 7793 8037 -5 2108 113 0 3 chr2 100345082 100345373 -152911210 + AluSq SINE Alu 1 290 -23 342 0 0 0 chr2 100345396 100345434 -152911149 + (CA)n Simple_repeat Simple_repeat 2 39 0 5012 43 0 0 chr2 100345484 100346090 -152910493 + L1PA3 LINE L1 5547 6152 -3 227 289 12 24 chr2 100346202 100346285 -152910298 + L1ME3A LINE L1 6041 6122 -48 1480 224 7 3 chr2 100346476 100346780 -152909803 - AluJo SINE Alu -7 305 1 480 103 16 60 chr2 100347216 100347400 -152909183 + (TTATA)n Simple_repeat Simple_repeat 4 179 0 34 0 0 22 chr2 100347402 100347428 -152909155 + AT_rich Low_complexity Low_complexity 1 27 -17 196 29 29 29 chr2 100347428 100347462 -152909121 + (TATAA)n Simple_repeat Simple_repeat 1 34 0 34 0 0 22 chr2 100347462 100347480 -152909103 + AT_rich Low_complexity Low_complexity 27 44 0 498 94 33 44 chr2 100347480 100347661 -152908922 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 254 153 31 10 chr2 100347660 100347758 -152908825 + (TATAA)n Simple_repeat Simple_repeat 5 104 0 * 572 102 52 5 chr2 100347737 100347954 -152908629 + (TTATA)n Simple_repeat Simple_repeat 1 227 0 246 327 195 0 chr2 100348574 100348687 -152907896 + L2 LINE L2 3138 3272 0 23 0 0 0 chr2 100350915 100350938 -152905645 + AT_rich Low_complexity Low_complexity 1 23 0 257 318 54 61 chr2 100351221 100351369 -152905214 - MIR SINE MIR -55 207 61 312 308 29 0 chr2 100351926 100352030 -152904553 - L2 LINE L2 -16 3297 3191 1427 198 0 51 chr2 100352521 100352835 -152903748 + AluJo SINE Alu 1 298 -4 21 36 0 0 chr2 100353041 100353069 -152903514 + AT_rich Low_complexity Low_complexity 1 28 0 272 303 128 0 chr2 100353072 100353181 -152903402 + L1ME LINE L1 5517 5639 -525 2216 123 0 0 chr2 100353327 100353635 -152902948 + AluSg SINE Alu 1 308 -2 8641 107 16 4 chr2 100353960 100355151 -152901432 - L1P LINE L1 -2495 3651 2441 957 83 0 0 chr2 100355151 100355283 -152901300 + (TA)n Simple_repeat Simple_repeat 1 132 0 8641 107 16 4 chr2 100355283 100355404 -152901179 - L1P LINE L1 -3705 2441 2323 4258 36 3 0 chr2 100355400 100356093 -152900490 + L1PA4 LINE L1 4743 5427 -728 * 2810 36 0 0 chr2 100356093 100356427 -152900156 + L1PA4 LINE L1 5815 6149 -6 4258 36 3 0 chr2 100356427 100357002 -152899581 + L1PA4 LINE L1 5427 6149 -6 262 225 18 27 chr2 100357002 100357113 -152899470 + (TAAA)n Simple_repeat Simple_repeat 3 112 0 502 352 43 16 chr2 100357807 100358060 -152898523 + MIR SINE MIR 3 262 0 754 299 84 12 chr2 100360504 100360825 -152895758 + MER115 DNA AcHobo 350 693 0 22 35 0 0 chr2 100360859 100360888 -152895695 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr2 100361168 100361192 -152895391 + AT_rich Low_complexity Low_complexity 1 24 0 2471 59 0 0 chr2 100361425 100361730 -152894853 - AluY SINE Alu -6 305 1 426 88 0 0 chr2 100362320 100362388 -152894195 + (TCTA)n Simple_repeat Simple_repeat 3 70 0 561 220 19 6 chr2 100364100 100364252 -152892331 - L1MC3 LINE L1 -12 7773 6194 234 237 34 0 chr2 100364271 100364330 -152892253 - L1MD2 LINE L1 -238 6121 6061 * 3741 240 96 35 chr2 100364317 100365884 -152890699 - L1MDa LINE L1 -4247 2293 580 216 260 0 0 chr2 100367428 100367478 -152889105 + GA-rich Low_complexity Low_complexity 3 52 0 216 261 0 0 chr2 100367567 100367659 -152888924 + GA-rich Low_complexity Low_complexity 3 94 0 207 0 0 0 chr2 100368093 100368116 -152888467 + (TG)n Simple_repeat Simple_repeat 1 23 0 446 280 77 75 chr2 100368864 100369333 -152887250 - MLT1G1 LTR MaLR -1 594 82 704 261 102 35 chr2 100369466 100369876 -152886707 - MLT1C LTR MaLR 0 467 7 249 287 69 0 chr2 100370082 100370183 -152886400 - MER103 DNA DNA 0 166 59 407 312 32 51 chr2 100370394 100370551 -152886032 + L2 LINE L2 2927 3080 -192 21 36 0 0 chr2 100370681 100370709 -152885874 + AT_rich Low_complexity Low_complexity 1 28 0 1308 224 146 32 chr2 100373543 100373953 -152882630 + MSTB2 LTR MaLR 1 457 0 288 0 0 0 chr2 100375341 100375373 -152881210 + (CA)n Simple_repeat Simple_repeat 2 33 0 1992 199 39 32 chr2 100375759 100376221 -152880362 - MLT1C LTR MaLR 0 467 3 408 169 0 0 chr2 100376843 100376920 -152879663 + (TA)n Simple_repeat Simple_repeat 1 77 0 230 235 94 0 chr2 100377021 100377106 -152879477 - L1MC4 LINE L1 -1357 6685 6593 184 380 58 0 chr2 100377111 100377232 -152879351 - MIR SINE MIR -18 244 117 180 286 107 27 chr2 100377535 100377647 -152878936 + L2 LINE L2 3119 3239 -74 3920 223 51 29 chr2 100377703 100379060 -152877523 - L1MC3 LINE L1 -746 5818 5484 513 209 9 0 chr2 100379080 100379195 -152877388 - L1MC3 LINE L1 -4181 2383 2268 3712 165 83 27 chr2 100379196 100380438 -152876145 + LTR12 LTR ERV1 10 712 -2 2038 248 46 54 chr2 100380441 100382038 -152874545 - L1MC3 LINE L1 -4300 2264 565 2154 242 46 19 chr2 100382038 100382625 -152873958 - LTR26 LTR ERV1 0 603 1 2038 248 46 54 chr2 100382625 100382666 -152873917 - L1MC3 LINE L1 -5999 565 525 * 22119 176 41 47 chr2 100382662 100388602 -152867981 + L1PA10 LINE L1 2 5901 -267 233 306 151 32 chr2 100388607 100388826 -152867757 + L3 LINE CR1 1175 1419 -158 258 171 11 114 chr2 100388858 100388946 -152867637 - L1MC3 LINE L1 -5964 81 3 25 51 0 0 chr2 100389176 100389215 -152867368 + AT_rich Low_complexity Low_complexity 1 39 0 27 29 0 0 chr2 100390084 100390118 -152866465 + AT_rich Low_complexity Low_complexity 1 34 0 1851 134 22 0 chr2 100390192 100390487 -152866096 + AluSx SINE Alu 1 301 0 319 132 0 0 chr2 100390899 100390986 -152865597 + L1PA3 LINE L1 6087 6173 0 2368 155 9 12 chr2 100392403 100392829 -152863754 + L1PA15 LINE L1 5732 6156 -9 861 211 0 5 chr2 100392840 100393030 -152863553 - Tigger1 DNA MER2_type -2220 198 10 234 333 140 26 chr2 100393064 100393292 -152863291 + L3 LINE CR1 1164 1417 -160 220 211 0 0 chr2 100394441 100394479 -152862104 + (TATG)n Simple_repeat Simple_repeat 2 39 0 1010 151 13 13 chr2 100394731 100394890 -152861693 - AluSg/x SINE Alu -17 295 137 2335 108 0 0 chr2 100394890 100395186 -152861397 - AluSc SINE Alu -13 296 1 363 326 0 14 chr2 100395201 100395342 -152861241 - L1ME3 LINE L1 -295 5867 5729 697 275 11 0 chr2 100395474 100395652 -152860931 - MIR SINE MIR -4 258 79 378 299 52 11 chr2 100395672 100395846 -152860737 + L2 LINE L2 2318 2498 -816 292 301 83 39 chr2 100396162 100396391 -152860192 + L2 LINE L2 3025 3263 -9 575 183 90 26 chr2 100396695 100396895 -152859688 + MER106B DNA MER1_type 30 1059 0 320 275 113 28 chr2 100399010 100399152 -152857431 - MIR SINE MIR -70 192 39 315 0 0 0 chr2 100399878 100399913 -152856670 + (CA)n Simple_repeat Simple_repeat 1 35 0 540 223 16 8 chr2 100400667 100400788 -152855795 - MIR SINE MIR -98 164 43 1757 168 0 55 chr2 100400859 100401035 -152855548 - AluJb SINE Alu -3 309 158 2177 121 7 3 chr2 100401035 100401332 -152855251 - AluSx SINE Alu -10 302 5 1757 168 0 55 chr2 100401332 100401482 -152855101 - AluJb SINE Alu -154 158 1 675 154 112 0 chr2 100401482 100401651 -152854932 + Charlie5 DNA MER1_type 2398 2585 -27 235 292 124 47 chr2 100401717 100401762 -152854821 - L2 LINE L2 -1451 1863 1823 2385 92 30 0 chr2 100401762 100402065 -152854518 + AluSx SINE Alu 1 312 0 235 292 124 47 chr2 100402065 100402317 -152854266 - L2 LINE L2 -1491 1823 1543 2250 109 13 3 chr2 100402830 100403133 -152853450 + AluSg SINE Alu 1 306 -4 439 220 110 42 chr2 100403256 100403447 -152853136 + MER102a DNA MER1_type 127 330 0 237 264 126 0 chr2 100403608 100403695 -152852888 - L3 LINE CR1 -550 1027 930 23 0 0 0 chr2 100403697 100403720 -152852863 + AT_rich Low_complexity Low_complexity 1 23 0 317 303 20 9 chr2 100403802 100403918 -152852665 - MIR SINE MIR -56 206 89 2032 138 47 0 chr2 100404027 100404325 -152852258 + AluSx SINE Alu 1 312 0 658 275 62 19 chr2 100404326 100404537 -152852046 + MIR SINE MIR 29 248 -14 1950 163 0 0 chr2 100404932 100405226 -152851357 + AluSx SINE Alu 1 294 -18 237 300 113 0 chr2 100405237 100405317 -152851266 - MIR SINE MIR -149 113 25 242 373 20 0 chr2 100405336 100405438 -152851145 - MIR SINE MIR -70 138 35 681 307 125 16 chr2 100405679 100406103 -152850480 + L2 LINE L2 1842 2311 -1003 357 265 62 19 chr2 100406241 100406403 -152850180 + L2 LINE L2 2578 2746 -568 2423 112 0 0 chr2 100406472 100406777 -152849806 - AluSq SINE Alu -6 307 3 186 133 0 0 chr2 100407560 100407590 -152848993 + (TCTG)n Simple_repeat Simple_repeat 1 30 0 422 217 65 0 chr2 100407843 100407935 -152848648 + L2 LINE L2 3215 3312 -1 195 349 0 23 chr2 100407945 100408031 -152848552 + L2 LINE L2 3184 3267 -5 2393 92 3 3 chr2 100408146 100408451 -152848132 + AluSp SINE Alu 1 305 -8 2016 146 19 13 chr2 100408810 100409118 -152847465 + AluJb SINE Alu 1 310 -2 191 232 207 24 chr2 100409140 100409222 -152847361 + L2 LINE L2 3203 3299 -14 2154 136 0 7 chr2 100410958 100411268 -152845315 - AluJb SINE Alu -2 310 3 245 344 23 0 chr2 100411286 100411417 -152845166 + (CCAA)n Simple_repeat Simple_repeat 3 136 0 262 296 162 62 chr2 100411417 100411443 -152845140 - L2 LINE L2 0 3272 3250 1957 159 0 17 chr2 100411443 100411744 -152844839 + AluSx SINE Alu 1 296 -16 262 296 162 62 chr2 100411744 100411896 -152844687 - L2 LINE L2 -22 3250 3076 398 304 174 10 chr2 100411962 100412255 -152844328 - L2 LINE L2 -728 2586 2246 419 271 113 48 chr2 100412301 100412622 -152843961 - L2 LINE L2 -79 3234 2878 2094 119 0 78 chr2 100412622 100412957 -152843626 + AluSx SINE Alu 1 309 -3 419 271 113 48 chr2 100412957 100413077 -152843506 - L2 LINE L2 -435 2878 2767 309 109 0 0 chr2 100413822 100413868 -152842715 + (CA)n Simple_repeat Simple_repeat 1 46 0 271 291 52 15 chr2 100414291 100414425 -152842158 - MIR3 SINE MIR -69 139 1 2121 122 14 7 chr2 100415884 100416178 -152840405 - AluSx SINE Alu -16 296 1 588 174 17 9 chr2 100418080 100418195 -152838388 + FLAM_C SINE Alu 3 118 -15 840 221 124 69 chr2 100469481 100469915 -152786668 + MER39 LTR ERV1 250 707 0 182 227 0 23 chr2 100470020 100470064 -152786519 - MER5A DNA MER1_type -21 168 126 233 203 51 17 chr2 100470121 100470180 -152786403 + L1MC5 LINE L1 7850 7910 -51 337 244 30 54 chr2 100470206 100470374 -152786209 + L1MC5 LINE L1 7773 7936 -25 266 233 129 69 chr2 100470374 100470490 -152786093 - MER5B DNA MER1_type -53 125 3 233 262 115 0 chr2 100470495 100470556 -152786027 - L2 LINE L2 -1 3271 3204 2090 112 0 83 chr2 100470733 100471072 -152785511 - AluSx SINE Alu -1 311 1 324 294 73 0 chr2 100471131 100471240 -152785343 - L1ME3 LINE L1 -81 6081 5965 1858 179 0 7 chr2 100472579 100472870 -152783713 + AluJb SINE Alu 1 289 -23 284 167 333 0 chr2 100473182 100473254 -152783329 + Tigger3(Golem) DNA MER2_type 2 97 -2932 * 1198 126 10 24 chr2 100473252 100473459 -152783124 + Tigger3(Golem) DNA MER2_type 2801 3004 -25 2473 141 25 9 chr2 100473471 100473919 -152782664 - L1MB1 LINE L1 0 6168 5714 2926 152 25 4 chr2 100474246 100475206 -152781377 - L1P5 LINE L1 -497 5654 4676 8669 164 45 4 chr2 100475212 100478300 -152778283 - L1PBa LINE L1 -2305 4557 1339 1254 141 2 1 chr2 100478403 100488361 -152768222 + ALR/Alpha Satellite centromeric 1 9969 -17 2317 115 3 0 chr2 100489061 100489366 -152767217 - AluSx SINE Alu -6 306 1 1518 102 0 0 chr2 100489574 100489771 -152766812 - AluY SINE Alu -9 302 106 338 297 65 7 chr2 100490092 100490247 -152766336 + L1MEd LINE L1 3 166 -5953 286 214 0 29 chr2 100490286 100490356 -152766227 + L1ME3A LINE L1 5477 5544 -2241 543 274 192 16 chr2 100490526 100490906 -152765677 + L1ME3A LINE L1 5717 6163 -7 1059 236 245 6 chr2 100491040 100491522 -152765061 + L1MA9 LINE L1 1 597 -6571 978 190 141 83 chr2 100491531 100491963 -152764620 - MSTB1 LTR MaLR 0 432 1 1988 229 8 11 chr2 100492025 100492493 -152764090 + L1MA9 LINE L1 761 1227 -5941 7211 189 44 20 chr2 100492535 100492629 -152763954 + L1MA9 LINE L1 4604 4694 -2483 429 20 0 0 chr2 100492629 100492679 -152763904 + (CA)n Simple_repeat Simple_repeat 2 51 0 7211 189 44 20 chr2 100492679 100493611 -152762972 + L1MA9 LINE L1 4694 5688 -1489 2244 139 0 0 chr2 100493611 100493921 -152762662 + AluSg SINE Alu 1 310 0 7211 189 44 20 chr2 100493921 100494614 -152761969 + L1MA9 LINE L1 5688 6362 -815 989 234 18 21 chr2 100494617 100494903 -152761680 + L1MA9 LINE L1 7019 7303 -30 2331 122 0 0 chr2 100497038 100497350 -152759233 + AluSx SINE Alu 1 312 0 262 269 10 39 chr2 100497603 100497707 -152758876 + L2 LINE L2 3213 3313 0 2308 112 3 0 chr2 100498845 100499150 -152757433 + AluSx SINE Alu 1 306 -6 244 233 83 33 chr2 100499272 100499392 -152757191 + L2 LINE L2 1278 1403 -1911 843 201 29 0 chr2 100499482 100499656 -152756927 - MER3 DNA MER1_type -26 183 5 556 265 283 19 chr2 100499662 100500646 -152755937 + L2 LINE L2 1509 2815 -499 383 90 48 48 chr2 100501081 100501247 -152755336 + (CCG)n Simple_repeat Simple_repeat 2 167 0 23 68 0 0 chr2 100501254 100501298 -152755285 + GC_rich Low_complexity Low_complexity 1 44 0 2028 130 30 0 chr2 100501466 100501767 -152754816 + AluSg SINE Alu 1 310 0 324 0 0 0 chr2 100501935 100501971 -152754612 + (TAA)n Simple_repeat Simple_repeat 2 37 0 616 201 82 31 chr2 100502034 100502193 -152754390 + MIR SINE MIR 48 214 -48 191 247 86 62 chr2 100502223 100502304 -152754279 - MER5A DNA MER1_type -48 141 59 1129 297 19 36 chr2 100502311 100502779 -152753804 - MLT1C LTR MaLR -5 462 3 470 195 6 0 chr2 100504305 100504426 -152752157 + CER Satellite Satellite 1 121 -18 * 1310 156 2 1 chr2 100504424 100515115 -152741468 + ALR/Alpha Satellite centromeric 1 10703 -12 7330 19 0 0 chr2 100515121 100515948 -152740635 - L1PA3 LINE L1 0 6155 5329 8329 49 0 1 chr2 100515949 100516992 -152739591 + L1PA3 LINE L1 4303 5344 -802 1037 158 5 12 chr2 100516992 100517695 -152738888 + ALR/Alpha Satellite centromeric 1 697 -17 2253 120 3 0 chr2 100518395 100518694 -152737889 - AluSx SINE Alu -12 300 1 1525 102 0 0 chr2 100518902 100519099 -152737484 - AluY SINE Alu -9 302 106 384 297 65 7 chr2 100519420 100519575 -152737008 + L1MEd LINE L1 3 166 -5953 299 157 43 71 chr2 100519613 100519683 -152736900 + L1ME3A LINE L1 5477 5544 -2241 699 261 187 26 chr2 100519853 100520243 -152736340 + L1ME3A LINE L1 5717 6169 -1 1247 230 262 6 chr2 100520367 100520859 -152735724 + L1MA9 LINE L1 1 618 -6550 1116 211 86 86 chr2 100520859 100521291 -152735292 - MSTB1 LTR MaLR 0 432 1 2188 226 8 11 chr2 100521353 100521821 -152734762 + L1MA9 LINE L1 761 1227 -5941 7375 191 43 20 chr2 100521863 100521957 -152734626 + L1MA9 LINE L1 4604 4694 -2484 414 0 0 0 chr2 100521957 100522003 -152734580 + (CA)n Simple_repeat Simple_repeat 2 47 0 7375 191 43 20 chr2 100522003 100522935 -152733648 + L1MA9 LINE L1 4694 5687 -1491 2234 139 0 0 chr2 100522935 100523245 -152733338 + AluSg SINE Alu 1 310 0 7375 191 43 20 chr2 100523245 100523938 -152732645 + L1MA9 LINE L1 5687 6362 -816 1016 231 18 21 chr2 100523941 100524227 -152732356 + L1MA9 LINE L1 7019 7303 -30 2331 122 0 0 chr2 100526363 100526675 -152729908 + AluSx SINE Alu 1 312 0 225 289 10 39 chr2 100526927 100527031 -152729552 + L2 LINE L2 3213 3313 0 2308 112 3 0 chr2 100528167 100528472 -152728111 + AluSx SINE Alu 1 306 -6 244 233 83 33 chr2 100528594 100528714 -152727869 + L2 LINE L2 1278 1403 -1911 857 195 29 0 chr2 100528804 100528978 -152727605 - MER3 DNA MER1_type -26 183 5 550 266 283 19 chr2 100528984 100529968 -152726615 + L2 LINE L2 1509 2815 -499 467 160 96 26 chr2 100530382 100530970 -152725613 + TAR1 Satellite telomeric 1 629 -244 1873 110 16 16 chr2 100530991 100531301 -152725282 + HSREP522 Satellite telomeric 3 312 -192 1643 164 16 38 chr2 100531927 100532245 -152724338 + AluJo SINE Alu 2 312 0 1703 195 7 3 chr2 100532250 100532557 -152724026 + AluJb SINE Alu 1 308 -4 1917 167 10 10 chr2 100533782 100534094 -152722489 + AluJo SINE Alu 1 312 0 2783 143 17 2 chr2 100534238 100534705 -152721878 + L1MB1 LINE L1 5695 6168 0 20378 49 49 19 chr2 100534815 100537453 -152719130 + L1P LINE L1 1 2719 -3427 961 89 0 12 chr2 100537554 100537723 -152718860 + HSREP522 Satellite telomeric 338 504 0 4878 214 62 21 chr2 100537723 100539033 -152717550 - L1 LINE L1 -1998 4148 2785 822 258 75 26 chr2 100539168 100539508 -152717075 + HSREP522 Satellite telomeric 1 356 -238 204 189 7 54 chr2 100540350 100540498 -152716085 + (CCCTG)n Simple_repeat Simple_repeat 1 141 0 367 219 0 68 chr2 100540647 100540839 -152715744 + (CCCTG)n Simple_repeat Simple_repeat 2 180 0 202 164 36 0 chr2 100540847 100540902 -152715681 + (CCCTAG)n Simple_repeat Simple_repeat 2 58 0 292 196 0 96 chr2 100540984 100541183 -152715400 + (CCCTG)n Simple_repeat Simple_repeat 1 180 0 * 337 269 60 0 chr2 100541134 100541268 -152715315 + (CCCTAG)n Simple_repeat Simple_repeat 1 142 0 392 184 0 72 chr2 100541307 100541496 -152715087 + (CCCTG)n Simple_repeat Simple_repeat 1 175 0 221 125 0 21 chr2 100541542 100541590 -152714993 + (CCCTG)n Simple_repeat Simple_repeat 1 47 0 433 266 48 7 chr2 100541596 100541939 -152714644 + (CCCTAG)n Simple_repeat Simple_repeat 1 356 0 250 179 60 26 chr2 100542037 100542188 -152714395 + (CCCTAG)n Simple_repeat Simple_repeat 6 161 0 390 275 16 44 chr2 100542206 100542388 -152714195 + (CCCTAG)n Simple_repeat Simple_repeat 2 178 0 227 157 0 78 chr2 100542411 100542564 -152714019 + (CCCTG)n Simple_repeat Simple_repeat 1 141 0 335 281 50 6 chr2 100542569 100542729 -152713854 + (CCCTAG)n Simple_repeat Simple_repeat 6 172 0 260 296 40 23 chr2 100542791 100542967 -152713616 + (CCCTAG)n Simple_repeat Simple_repeat 1 179 0 * 265 186 5 98 chr2 100542939 100543133 -152713450 + (CCCTG)n Simple_repeat Simple_repeat 1 176 0 * 412 283 40 0 chr2 100542998 100543150 -152713433 + (CCCTAG)n Simple_repeat Simple_repeat 3 160 0 210 150 0 90 chr2 100543190 100543357 -152713226 + (CCCTG)n Simple_repeat Simple_repeat 5 156 0 299 244 75 6 chr2 100543452 100543612 -152712971 + (CCCTAG)n Simple_repeat Simple_repeat 2 172 0 369 286 54 0 chr2 100543825 100543993 -152712590 + (CTAGGG)n Simple_repeat Simple_repeat 1 177 0 356 234 32 11 chr2 100544196 100544290 -152712293 - MIR SINE MIR -75 187 92 803 126 0 17 chr2 100544292 100544411 -152712172 + AluSq/x SINE Alu 17 133 -179 205 141 0 90 chr2 100544465 100544543 -152712040 + (CAGGG)n Simple_repeat Simple_repeat 1 71 0 386 212 0 67 chr2 100544550 100544729 -152711854 + (CCCTG)n Simple_repeat Simple_repeat 1 167 0 222 222 6 74 chr2 100544740 100544902 -152711681 + (CCCTG)n Simple_repeat Simple_repeat 1 151 0 301 127 0 75 chr2 100544995 100545129 -152711454 + (CCCTG)n Simple_repeat Simple_repeat 1 124 0 279 186 0 67 chr2 100545157 100545416 -152711167 + (CCCTG)n Simple_repeat Simple_repeat 1 241 0 222 168 0 88 chr2 100545599 100545870 -152710713 + (CCCTG)n Simple_repeat Simple_repeat 1 247 0 270 124 0 85 chr2 100545893 100546046 -152710537 + (CCCTG)n Simple_repeat Simple_repeat 1 140 0 230 338 44 0 chr2 100546052 100546188 -152710395 + (CCCTAG)n Simple_repeat Simple_repeat 1 142 0 737 183 26 0 chr2 100546617 100546755 -152709828 + FLAM_C SINE Alu 1 141 0 1488 199 50 13 chr2 100546755 100547056 -152709527 + AluJo SINE Alu 1 312 0 21 57 0 0 chr2 100547057 100547092 -152709491 + AT_rich Low_complexity Low_complexity 1 35 0 268 122 98 32 chr2 100547182 100547305 -152709278 + (AGATG)n Simple_repeat Simple_repeat 5 135 0 694 98 58 29 chr2 100547344 100547517 -152709066 + (AAATG)n Simple_repeat Simple_repeat 3 180 0 687 76 59 51 chr2 100547531 100547847 -152708736 + (AAATG)n Simple_repeat Simple_repeat 1 318 0 512 114 84 24 chr2 100547868 100548035 -152708548 + (AAATG)n Simple_repeat Simple_repeat 3 179 0 620 105 76 25 chr2 100548059 100548297 -152708286 + (AAATG)n Simple_repeat Simple_repeat 1 250 0 209 143 66 33 chr2 100548284 100548375 -152708208 + (AGATG)n Simple_repeat Simple_repeat 5 98 0 * 616 108 72 18 chr2 100548394 100548560 -152708023 + (AGATG)n Simple_repeat Simple_repeat 5 179 0 * 678 115 61 6 chr2 100548541 100548706 -152707877 + (AAATG)n Simple_repeat Simple_repeat 5 178 0 603 93 80 19 chr2 100548718 100548880 -152707703 + (AAATG)n Simple_repeat Simple_repeat 2 173 0 620 129 45 45 chr2 100548899 100549077 -152707506 + (AAATG)n Simple_repeat Simple_repeat 1 178 0 846 80 71 9 chr2 100549105 100549317 -152707266 + (AAATG)n Simple_repeat Simple_repeat 1 225 0 626 122 33 44 chr2 100549321 100549502 -152707081 + (AGATG)n Simple_repeat Simple_repeat 2 180 0 448 143 53 24 chr2 100549502 100549711 -152706872 + (AAATG)n Simple_repeat Simple_repeat 1 215 0 630 88 64 29 chr2 100549738 100549909 -152706674 + (AAATG)n Simple_repeat Simple_repeat 2 178 0 276 100 0 0 chr2 100549909 100549949 -152706634 + (AGATG)n Simple_repeat Simple_repeat 5 44 0 25 31 0 0 chr2 100549997 100550029 -152706554 + AT_rich Low_complexity Low_complexity 1 32 0 2474 204 41 24 chr2 100550670 100551372 -152705211 - L1 LINE L1 -1549 4597 3884 3416 174 3 14 chr2 100551374 100552033 -152704550 + L1MA5 LINE L1 5642 6293 -7 223 314 0 0 chr2 100552348 100552418 -152704165 + MIR SINE MIR 185 254 -8 2051 146 0 0 chr2 100552585 100552879 -152703704 - AluSx SINE Alu -18 294 1 1796 169 10 26 chr2 100553251 100553558 -152703025 + AluSp SINE Alu 1 302 -11 24 77 0 0 chr2 100554026 100554078 -152702505 + AT_rich Low_complexity Low_complexity 1 52 0 281 297 22 0 chr2 100555588 100555679 -152700904 + L2 LINE L2 3216 3308 -5 2930 57 0 0 chr2 100556439 100556808 -152699775 - L1PA5 LINE L1 0 6154 5786 1372 193 98 6 chr2 100556929 100557245 -152699338 - MER2 DNA MER2_type 0 345 1 364 249 115 29 chr2 100557702 100557911 -152698672 - L1ME4a LINE L1 -205 5916 5690 293 216 14 40 chr2 100557964 100558038 -152698545 + L2 LINE L2 3241 3312 -1 942 187 0 44 chr2 100559712 100559894 -152696689 + AluJo SINE Alu 1 174 -138 302 85 0 0 chr2 100559896 100559943 -152696640 - FRAM/FAM SINE Alu -78 88 42 997 281 52 1 chr2 100559943 100560380 -152696203 - L1ME4a LINE L1 -508 5662 5256 2209 125 0 0 chr2 100560639 100560943 -152695640 - AluSq SINE Alu -9 304 1 519 104 40 8 chr2 100561132 100561257 -152695326 + (TA)n Simple_repeat Simple_repeat 2 130 0 360 0 0 0 chr2 100562171 100562211 -152694372 + (CA)n Simple_repeat Simple_repeat 2 41 0 1694 166 36 23 chr2 100562254 100562555 -152694028 + AluJb SINE Alu 1 305 -7 424 47 16 16 chr2 100562565 100562629 -152693954 + (GGAA)n Simple_repeat Simple_repeat 2 65 0 249 253 92 11 chr2 100562679 100562766 -152693817 + MLT1L LTR MaLR 105 198 -417 401 130 294 0 chr2 100562865 100562957 -152693626 + MSTA LTR MaLR 286 404 -24 213 65 0 0 chr2 100563809 100563840 -152692743 + (T)n Simple_repeat Simple_repeat 1 31 0 623 178 185 0 chr2 100563840 100563986 -152692597 + MSTA LTR MaLR 256 428 0 322 169 0 78 chr2 100564770 100564847 -152691736 + MER115 DNA AcHobo 509 579 -114 342 225 22 0 chr2 100564920 100565009 -152691574 + MER115 DNA AcHobo 595 685 -8 513 115 0 0 chr2 100565389 100565467 -152691116 + (TG)n Simple_repeat Simple_repeat 1 78 0 23 54 0 0 chr2 100565559 100565596 -152690987 + AT_rich Low_complexity Low_complexity 1 37 0 639 240 0 8 chr2 100565638 100565759 -152690824 + FLAM_A SINE Alu 1 120 -13 1409 194 29 48 chr2 100565866 100566175 -152690408 + AluJb SINE Alu 1 303 -9 22 56 0 0 chr2 100566213 100566249 -152690334 + AT_rich Low_complexity Low_complexity 1 36 0 667 207 82 24 chr2 100566277 100566580 -152690003 + LTR48 LTR ERV1 409 786 -1 227 219 12 12 chr2 100566697 100566779 -152689804 + A-rich Low_complexity Low_complexity 1 82 0 2105 81 51 3 chr2 100566806 100567102 -152689481 + AluY SINE Alu 1 310 -1 1650 210 81 24 chr2 100567102 100567487 -152689096 + L1ME LINE L1 5181 5616 -550 2489 59 3 0 chr2 100567487 100567791 -152688792 + AluY SINE Alu 1 305 -6 1650 210 81 24 chr2 100567791 100567983 -152688600 + L1ME LINE L1 5616 5796 -370 2419 71 10 0 chr2 100568177 100568485 -152688098 - AluY SINE Alu 0 311 1 284 311 24 79 chr2 100568966 100569130 -152687453 + L2 LINE L2 3158 3312 -1 1375 261 79 55 chr2 100569347 100569953 -152686630 + MLT1E2 LTR MaLR 6 626 0 228 193 45 11 chr2 100570010 100570098 -152686485 - L1MB2 LINE L1 -3 6168 6078 3511 173 10 35 chr2 100570100 100570854 -152685729 - L1MA4 LINE L1 -278 6022 5288 657 164 0 90 chr2 100570857 100570961 -152685622 - AluJo/FRAM SINE Alu -22 290 199 2381 74 6 6 chr2 100570961 100571272 -152685311 + AluY SINE Alu 1 311 0 657 164 0 90 chr2 100571272 100571301 -152685282 - AluJo/FRAM SINE Alu -113 199 169 1384 229 20 78 chr2 100571301 100571598 -152684985 - L1M4 LINE L1 -821 5325 5077 1519 75 0 51 chr2 100571598 100571812 -152684771 - AluY SINE Alu -108 203 1 1384 229 20 78 chr2 100571812 100572100 -152684483 - L1M4 LINE L1 -1069 5077 4774 38 0 0 0 chr2 100572415 100572453 -152684130 + AT_rich Low_complexity Low_complexity 1 38 0 830 222 0 0 chr2 100572569 100572731 -152683852 + AluJb SINE Alu 137 298 -14 26 74 0 0 chr2 100572735 100572789 -152683794 + AT_rich Low_complexity Low_complexity 1 54 0 386 289 104 32 chr2 100573821 100574070 -152682513 - L1MEc LINE L1 -3994 2402 2136 430 267 58 62 chr2 100574267 100574492 -152682091 - HAL1b LINE L1 -432 916 693 21 0 0 0 chr2 100575963 100575984 -152680599 + AT_rich Low_complexity Low_complexity 1 21 0 252 169 51 0 chr2 100576075 100576134 -152680449 - L1MD2 LINE L1 -23 6336 6275 * 848 202 19 101 chr2 100576130 100576437 -152680146 - L1M4 LINE L1 -818 5328 5047 21 0 0 0 chr2 100576450 100576471 -152680112 + AT_rich Low_complexity Low_complexity 1 21 0 703 175 58 22 chr2 100576471 100576608 -152679975 - FRAM SINE Alu -25 151 10 499 261 40 15 chr2 100576620 100576819 -152679764 - L1M4 LINE L1 -1109 5037 4834 22 35 0 0 chr2 100576958 100576987 -152679596 + AT_rich Low_complexity Low_complexity 1 29 0 1730 60 0 5 chr2 100577248 100577465 -152679118 - L1PA7 LINE L1 -8 6146 5931 1725 168 0 14 chr2 100577544 100577836 -152678747 - AluJb SINE Alu -24 288 1 5856 163 25 4 chr2 100578070 100579436 -152677147 + L1MA5A LINE L1 4126 5523 -743 570 151 92 25 chr2 100579437 100579556 -152677027 - AluSg/x SINE Alu -18 292 166 4410 119 61 7 chr2 100579556 100580298 -152676285 + L1MA5A LINE L1 5512 6293 -4 2147 137 3 0 chr2 100580427 100580726 -152675857 + AluSx SINE Alu 1 300 -12 30 0 0 0 chr2 100580820 100580850 -152675733 + AT_rich Low_complexity Low_complexity 1 30 0 239 169 254 34 chr2 100580850 100580909 -152675674 - MER5A DNA MER1_type -87 102 31 274 164 0 0 chr2 100581059 100581114 -152675469 - Alu SINE Alu -8 294 240 619 378 108 20 chr2 100581234 100582176 -152674407 - L2 LINE L2 -186 3086 2060 25 0 0 0 chr2 100582713 100582738 -152673845 + AT_rich Low_complexity Low_complexity 1 25 0 2220 111 3 10 chr2 100582879 100583186 -152673397 - AluSp SINE Alu -1 312 8 382 200 12 0 chr2 100583191 100583276 -152673307 - LTR48B LTR ERV1 -10 634 549 709 243 0 0 chr2 100583303 100583443 -152673140 - AluJb SINE Alu -33 279 140 362 88 0 59 chr2 100583714 100583781 -152672802 - MLT2A1 LTR ERVL 0 444 382 2200 93 112 6 chr2 100583781 100584146 -152672437 + MLT2A1 LTR ERVL 1 404 -40 201 195 0 0 chr2 100584149 100584190 -152672393 + (TG)n Simple_repeat Simple_repeat 2 42 0 293 164 0 0 chr2 100584193 100584248 -152672335 + MLT2A1 LTR ERVL 399 453 0 2638 102 8 0 chr2 100584248 100584631 -152671952 - MLT2A1 LTR ERVL -58 386 1 13721 115 12 3 chr2 100584631 100587074 -152669509 - ERVL LTR ERVL 0 5654 3162 3368 106 2 2 chr2 100587067 100587565 -152669018 - HERVL-A1 LTR ERVL -3840 1814 1317 * 1717 118 0 0 chr2 100587554 100587817 -152668766 - HERVL-A1 LTR ERVL -5391 263 1 * 2813 101 27 34 chr2 100587817 100588264 -152668319 - MLT2A1 LTR ERVL 0 444 1 354 306 119 13 chr2 100591350 100591661 -152664922 + LTR16C LTR ERVL 110 453 -38 1293 243 104 13 chr2 100592072 100592525 -152664058 + MLT1D LTR MaLR 12 505 0 249 33 0 0 chr2 100592824 100592854 -152663729 + (TTA)n Simple_repeat Simple_repeat 2 31 0 2736 33 0 9 chr2 100592854 100593188 -152663395 - L1PA5 LINE L1 -19 6135 5805 245 302 50 73 chr2 100593479 100593658 -152662925 + MIR3 SINE MIR 9 183 -25 799 269 123 42 chr2 100593977 100594382 -152662201 - MLT1D LTR MaLR 0 505 68 288 0 0 0 chr2 100594487 100594519 -152662064 + (TC)n Simple_repeat Simple_repeat 1 32 0 3624 158 54 40 chr2 100594591 100595440 -152661143 - MER4D LTR ERV1 0 827 1 24 32 0 0 chr2 100597618 100597649 -152658934 + GC_rich Low_complexity Low_complexity 1 31 0 502 326 42 0 chr2 100598781 100598971 -152657612 - HERVL LTR ERVL -3262 2502 2305 254 284 20 20 chr2 100599325 100599427 -152657156 - HERVL LTR ERVL -5047 607 506 441 337 89 38 chr2 100600273 100600620 -152655963 + L2 LINE L2 2451 2815 -499 22 35 0 0 chr2 100601054 100601083 -152655500 + AT_rich Low_complexity Low_complexity 1 29 0 241 267 0 30 chr2 100601373 100601508 -152655075 + GA-rich Low_complexity Low_complexity 1 131 0 1533 231 88 24 chr2 100601537 100602224 -152654359 - L1M4c LINE L1 -5025 1517 824 357 315 16 0 chr2 100602410 100602537 -152654046 - L1M4c LINE L1 -5717 929 801 294 306 97 20 chr2 100602856 100603052 -152653531 - L1M4c LINE L1 -6324 218 8 1827 209 106 14 chr2 100603106 100603531 -152653052 - MLT1C LTR MaLR 0 467 4 543 267 111 23 chr2 100603534 100603907 -152652676 - L1MEc LINE L1 -3688 2694 2336 22 0 0 0 chr2 100603954 100603976 -152652607 + AT_rich Low_complexity Low_complexity 1 22 0 2168 102 0 0 chr2 100604342 100604625 -152651958 - AluY SINE Alu -28 283 1 584 291 47 35 chr2 100604680 100604999 -152651584 - L1MEc LINE L1 -4544 1840 1518 1306 219 165 34 chr2 100605000 100605443 -152651140 + L1MB5 LINE L1 5662 6162 -12 292 248 174 50 chr2 100605901 100606199 -152650384 + L1MCc LINE L1 54 388 -6035 1396 238 3 7 chr2 100606269 100606563 -152650020 + MLT1A1 LTR MaLR 73 365 0 411 290 21 35 chr2 100606798 100606943 -152649640 + L1MCc LINE L1 1768 1910 -5031 859 255 50 19 chr2 100607012 100607388 -152649195 + L1MCc LINE L1 3045 3432 -3509 599 203 7 24 chr2 100607483 100608071 -152648512 + CT-rich Low_complexity Low_complexity 1 578 0 21 0 0 0 chr2 100608118 100608139 -152648444 + AT_rich Low_complexity Low_complexity 1 21 0 1136 256 43 76 chr2 100608199 100608472 -152648111 + MLT1D LTR MaLR 5 255 -250 2099 124 7 0 chr2 100608472 100608770 -152647813 + AluY SINE Alu 3 302 -9 1136 256 43 76 chr2 100608770 100609012 -152647571 + MLT1D LTR MaLR 255 503 -2 1534 203 0 11 chr2 100610004 100610285 -152646298 + AluJb SINE Alu 11 288 -24 22 0 0 0 chr2 100610285 100610307 -152646276 + AT_rich Low_complexity Low_complexity 1 22 0 1603 206 61 13 chr2 100611485 100611878 -152644705 + MER54A LTR ERVL 1 412 -489 2230 109 74 15 chr2 100611887 100612225 -152644358 + THE1B LTR MaLR 7 364 0 1405 246 46 10 chr2 100612263 100612678 -152643905 + MER54A LTR ERVL 472 901 0 26 0 0 0 chr2 100613481 100613507 -152643076 + AT_rich Low_complexity Low_complexity 1 26 0 369 268 17 22 chr2 100613595 100613774 -152642809 + (TA)n Simple_repeat Simple_repeat 2 179 0 21 0 0 0 chr2 100613966 100613987 -152642596 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 100614276 100614297 -152642286 + AT_rich Low_complexity Low_complexity 1 21 0 2338 180 104 11 chr2 100614552 100615092 -152641491 + LTR49 LTR ERV1 1 590 -5 1755 172 56 23 chr2 100615280 100615711 -152640872 + LTR56 LTR ERV1 1 445 0 549 229 142 11 chr2 100615851 100616034 -152640549 - MER20 DNA MER1_type -3 216 10 25 31 0 0 chr2 100616293 100616325 -152640258 + AT_rich Low_complexity Low_complexity 1 32 0 25 51 0 0 chr2 100616529 100616568 -152640015 + AT_rich Low_complexity Low_complexity 1 39 0 21 57 0 0 chr2 100616595 100616630 -152639953 + AT_rich Low_complexity Low_complexity 1 35 0 1527 169 86 64 chr2 100617030 100617054 -152639529 + LTR49 LTR ERV1 12 34 -561 1959 127 7 4 chr2 100617054 100617329 -152639254 - AluSq SINE Alu -24 289 14 1527 169 86 64 chr2 100617329 100617711 -152638872 + LTR49 LTR ERV1 34 427 -168 247 155 14 14 chr2 100617745 100617816 -152638767 + (TA)n Simple_repeat Simple_repeat 1 71 0 21 82 0 0 chr2 100618031 100618080 -152638503 + AT_rich Low_complexity Low_complexity 1 49 0 728 141 31 0 chr2 100619315 100619443 -152637140 + MSTB1 LTR MaLR 1 132 -300 801 305 78 53 chr2 100619493 100620225 -152636358 - L1MEc LINE L1 -5101 1295 546 1197 170 22 4 chr2 100620334 100620564 -152636019 - L1MB3 LINE L1 -1 6182 5949 192 163 0 0 chr2 100622966 100623009 -152633574 + CT-rich Low_complexity Low_complexity 2 44 0 341 228 219 28 chr2 100623963 100624178 -152632405 + MER112 DNA MER1_type 1 256 0 741 122 52 0 chr2 100624279 100624394 -152632189 - FLAM_A SINE Alu -12 121 1 1457 56 11 0 chr2 100624409 100624587 -152631996 - AluY SINE Alu -2 309 130 2406 62 0 0 chr2 100624596 100624888 -152631695 - AluY SINE Alu -19 292 1 21 36 0 0 chr2 100625135 100625163 -152631420 + AT_rich Low_complexity Low_complexity 1 28 0 187 275 0 0 chr2 100625542 100625582 -152631001 + MIR SINE MIR 52 91 -171 1199 141 85 44 chr2 100625783 100626053 -152630530 + L1MC3 LINE L1 6839 7119 -666 233 279 0 0 chr2 100626060 100626121 -152630462 + MLT1F1 LTR MaLR 64 124 -443 526 127 18 46 chr2 100626121 100626235 -152630348 + L1MC3 LINE L1 7189 7507 -488 267 329 66 46 chr2 100628957 100629109 -152627474 - MIR SINE MIR -22 240 86 3021 87 22 9 chr2 100629734 100630181 -152626402 - L1PB1 LINE L1 0 6151 5699 21262 27 0 1 chr2 100632173 100635485 -152621098 + L1PA3 LINE L1 2845 6155 0 25 0 0 0 chr2 100635506 100635531 -152621052 + AT_rich Low_complexity Low_complexity 1 25 0 1933 93 10 45 chr2 100636674 100636985 -152619598 + AluSc SINE Alu 1 300 -9 1725 118 72 4 chr2 100637553 100637816 -152618767 + AluSx SINE Alu 5 285 -27 257 27 54 0 chr2 100637838 100637875 -152618708 + (TAAAAA)n Simple_repeat Simple_repeat 2 40 0 183 80 0 0 chr2 100638367 100638392 -152618191 + (A)n Simple_repeat Simple_repeat 1 25 0 196 341 103 8 chr2 100638997 100639123 -152617460 + L2 LINE L2 2721 2858 -456 230 320 39 62 chr2 100639189 100639317 -152617266 + L2 LINE L2 2948 3072 -200 193 270 206 40 chr2 100639404 100639530 -152617053 + L2 LINE L2 3122 3268 -4 23 33 0 0 chr2 100639828 100639858 -152616725 + AT_rich Low_complexity Low_complexity 1 30 0 2590 58 0 0 chr2 100639908 100640218 -152616365 - AluY SINE Alu -1 310 1 252 0 0 0 chr2 100641231 100641259 -152615324 + (A)n Simple_repeat Simple_repeat 1 28 0 570 251 181 0 chr2 100643189 100643404 -152613179 - MIR SINE MIR 0 262 9 23 0 0 0 chr2 100644077 100644100 -152612483 + AT_rich Low_complexity Low_complexity 1 23 0 793 176 0 0 chr2 100645106 100645231 -152611352 + FLAM_A SINE Alu 1 125 -8 2007 81 59 4 chr2 100645621 100645741 -152610842 + AluSx SINE Alu 1 113 -199 311 0 26 0 chr2 100645741 100645780 -152610803 + (TAAAA)n Simple_repeat Simple_repeat 1 40 0 2007 81 59 4 chr2 100645780 100645932 -152610651 + AluSx SINE Alu 113 288 -24 38 22 0 0 chr2 100645932 100645977 -152610606 + AT_rich Low_complexity Low_complexity 1 45 0 281 164 91 0 chr2 100647981 100648036 -152608547 + L2 LINE L2 3250 3309 -4 491 319 42 11 chr2 100649661 100649852 -152606731 - HERVL LTR ERVL -3191 2463 2267 456 334 89 38 chr2 100651153 100651500 -152605083 + L2 LINE L2 2451 2815 -499 22 35 0 0 chr2 100651934 100651963 -152604620 + AT_rich Low_complexity Low_complexity 1 29 0 235 245 22 22 chr2 100652253 100652392 -152604191 + GA-rich Low_complexity Low_complexity 1 139 0 1573 228 87 23 chr2 100652421 100653108 -152603475 - L1M4c LINE L1 -5025 1517 824 382 307 16 0 chr2 100653294 100653421 -152603162 - L1M4c LINE L1 -5717 929 801 294 306 97 20 chr2 100653740 100653936 -152602647 - L1M4c LINE L1 -6324 218 8 1823 215 106 12 chr2 100653990 100654414 -152602169 - MLT1C LTR MaLR 0 467 4 524 277 104 20 chr2 100654417 100654826 -152601757 - L1MEc LINE L1 -3688 2694 2299 22 0 0 0 chr2 100654852 100654874 -152601709 + AT_rich Low_complexity Low_complexity 1 22 0 2038 116 0 7 chr2 100655240 100655525 -152601058 - AluY SINE Alu -28 283 1 547 299 34 28 chr2 100655580 100655901 -152600682 - L1MEc LINE L1 -4544 1840 1518 1110 243 151 27 chr2 100655902 100656347 -152600236 + L1MB8 LINE L1 5662 6161 -17 1422 235 3 7 chr2 100657167 100657461 -152599122 + MLT1A1 LTR MaLR 73 365 0 411 290 21 35 chr2 100657696 100657841 -152598742 + L1MCa LINE L1 1253 1395 -5031 862 257 48 19 chr2 100657910 100658287 -152598296 + L1MCa LINE L1 2530 2917 -3509 578 216 5 24 chr2 100658382 100658970 -152597613 + CT-rich Low_complexity Low_complexity 1 576 0 21 0 0 0 chr2 100659013 100659034 -152597549 + AT_rich Low_complexity Low_complexity 1 21 0 1085 260 43 76 chr2 100659094 100659367 -152597216 + MLT1D LTR MaLR 5 255 -250 2135 124 7 0 chr2 100659367 100659666 -152596917 + AluY SINE Alu 3 303 -8 1085 260 43 76 chr2 100659666 100659908 -152596675 + MLT1D LTR MaLR 255 503 -2 1534 203 0 11 chr2 100660900 100661181 -152595402 + AluJb SINE Alu 11 288 -24 22 0 0 0 chr2 100661181 100661203 -152595380 + AT_rich Low_complexity Low_complexity 1 22 0 1603 216 51 2 chr2 100662381 100662774 -152593809 + MER54A LTR ERVL 1 412 -489 2196 112 74 15 chr2 100662783 100663121 -152593462 + THE1B LTR MaLR 7 364 0 1360 251 46 10 chr2 100663159 100663574 -152593009 + MER54A LTR ERVL 472 901 0 26 0 0 0 chr2 100664377 100664403 -152592180 + AT_rich Low_complexity Low_complexity 1 26 0 182 191 21 0 chr2 100664625 100664672 -152591911 + (TATATG)n Simple_repeat Simple_repeat 6 53 0 21 0 0 0 chr2 100664862 100664883 -152591700 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 100665168 100665189 -152591394 + AT_rich Low_complexity Low_complexity 1 21 0 2348 178 104 11 chr2 100665444 100665984 -152590599 + LTR49 LTR ERV1 1 590 -5 1722 174 56 23 chr2 100666172 100666603 -152589980 + LTR56 LTR ERV1 1 445 0 549 229 142 11 chr2 100666743 100666926 -152589657 - MER20 DNA MER1_type -3 216 10 25 31 0 0 chr2 100667186 100667218 -152589365 + AT_rich Low_complexity Low_complexity 1 32 0 25 51 0 0 chr2 100667422 100667461 -152589122 + AT_rich Low_complexity Low_complexity 1 39 0 1550 167 83 64 chr2 100667923 100667947 -152588636 + LTR49 LTR ERV1 12 34 -561 1971 124 7 4 chr2 100667947 100668222 -152588361 - AluSq SINE Alu -24 289 14 1550 167 83 64 chr2 100668222 100668605 -152587978 + LTR49 LTR ERV1 34 427 -168 247 155 14 14 chr2 100668639 100668710 -152587873 + (TA)n Simple_repeat Simple_repeat 1 71 0 809 158 23 0 chr2 100670207 100670340 -152586243 + MSTB1 LTR MaLR 1 136 -296 489 316 103 45 chr2 100670406 100671556 -152585027 - L1MEc LINE L1 -5120 1276 61 24 0 0 0 chr2 100671820 100671844 -152584739 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 100671967 100671988 -152584595 + AT_rich Low_complexity Low_complexity 1 21 0 306 304 24 24 chr2 100672211 100672336 -152584247 - L1MEc LINE L1 -4741 1980 1856 354 316 93 40 chr2 100672413 100672660 -152583923 - L1MEc LINE L1 -4815 1725 1466 198 0 0 0 chr2 100672694 100672716 -152583867 + (TTTTA)n Simple_repeat Simple_repeat 4 25 0 41828 55 8 1 chr2 100672716 100678810 -152577773 - L1PA3 LINE L1 -13 6142 9 741 125 6 0 chr2 100678833 100682960 -152573623 - CER Satellite Satellite 0 4151 1 1251 43 0 12 chr2 100682965 100683127 -152573456 + L1PA4 LINE L1 5996 6155 0 2086 130 0 10 chr2 100683481 100683789 -152572794 + AluSp SINE Alu 1 305 -8 2038 124 10 0 chr2 100683826 100684125 -152572458 - AluSx SINE Alu -10 302 1 1385 194 26 16 chr2 100685035 100685464 -152571119 + MER67C LTR ERV1 218 710 0 2439 166 14 5 chr2 100685953 100686386 -152570197 + LTR56 LTR ERV1 9 445 0 2150 113 3 3 chr2 100688104 100688404 -152568179 + AluSp SINE Alu 1 300 -13 239 261 9 99 chr2 100688475 100688586 -152567997 + MIR SINE MIR 153 253 -9 213 338 162 7 chr2 100688800 100688948 -152567635 + MER5A DNA MER1_type 19 189 0 2127 115 0 29 chr2 100689799 100690113 -152566470 + AluSx SINE Alu 1 305 -7 512 220 92 60 chr2 100690445 100690663 -152565920 - L1MC4 LINE L1 -537 7505 7281 339 348 161 0 chr2 100690809 100690970 -152565613 + MER5A DNA MER1_type 2 188 -1 232 319 83 30 chr2 100691660 100691829 -152564754 - MER5A DNA MER1_type -1 188 11 3613 236 48 13 chr2 100692844 100694968 -152561615 - L1MA9 LINE L1 -25 6175 3981 688 333 50 47 chr2 100694973 100695489 -152561094 - L1MA9 LINE L1 -5090 865 348 1953 92 4 8 chr2 100695498 100695760 -152560823 - AluSq SINE Alu -52 261 1 27 0 0 0 chr2 100695898 100695925 -152560658 + AT_rich Low_complexity Low_complexity 1 27 0 1749 200 57 32 chr2 100695971 100696033 -152560550 - L1MB2 LINE L1 -7 7583 7524 1202 254 7 10 chr2 100696033 100696321 -152560262 + AluJo SINE Alu 2 288 -14 1749 200 57 32 chr2 100696321 100696747 -152559836 - L1MB2 LINE L1 -66 7524 7084 261 153 56 7 chr2 100696748 100696892 -152559691 + (TA)n Simple_repeat Simple_repeat 2 152 0 206 273 42 6 chr2 100696908 100697073 -152559510 + (TA)n Simple_repeat Simple_repeat 1 171 0 40 0 0 0 chr2 100697092 100697132 -152559451 + AT_rich Low_complexity Low_complexity 1 40 0 1160 280 83 15 chr2 100697155 100698064 -152558519 - L1MB2 LINE L1 -568 7022 6095 707 276 54 63 chr2 100698194 100698343 -152558240 - L1MB2 LINE L1 -3262 4303 4154 1417 199 33 11 chr2 100698343 100698619 -152557964 - AluJb SINE Alu -30 282 1 707 276 54 63 chr2 100698619 100698749 -152557834 - L1MB2 LINE L1 -3411 4154 4024 1814 235 36 2 chr2 100698749 100699161 -152557422 + MSTB LTR MaLR 1 426 0 707 276 54 63 chr2 100699161 100699532 -152557051 - L1MB2 LINE L1 -3541 4024 3658 456 198 0 0 chr2 100699533 100699614 -152556969 - AluJ/FLAM SINE Alu -228 84 4 560 269 61 28 chr2 100699698 100700059 -152556524 - L1MB2 LINE L1 -3922 3645 3273 2156 96 0 10 chr2 100700069 100700382 -152556201 - AluSg1 SINE Alu 0 309 5 30 27 0 0 chr2 100700399 100700436 -152556147 + AT_rich Low_complexity Low_complexity 1 37 0 530 250 0 9 chr2 100700643 100700759 -152555824 - FLAM_C SINE Alu -28 115 1 303 273 0 36 chr2 100700760 100700870 -152555713 - L1MB2 LINE L1 -4573 2992 2887 373 271 26 104 chr2 100700910 100701078 -152555505 - L1MB2 LINE L1 -5031 2536 2382 2229 80 0 7 chr2 100701078 100701404 -152555179 - AluY SINE Alu 0 324 1 373 271 26 104 chr2 100701404 100701426 -152555157 - L1MB2 LINE L1 -5185 2382 2360 1199 256 60 47 chr2 100701817 100702109 -152554474 - L1MB2 LINE L1 -27 6380 6093 1947 120 17 10 chr2 100702109 100702401 -152554182 - AluSp SINE Alu -17 296 3 1199 256 60 47 chr2 100702401 100702547 -152554036 - L1MB2 LINE L1 -314 6093 5933 2096 116 0 3 chr2 100702547 100702840 -152553743 + AluY SINE Alu 1 292 -19 1199 256 60 47 chr2 100702840 100702864 -152553719 - L1MB2 LINE L1 -474 5933 5911 758 268 52 18 chr2 100702867 100703196 -152553387 - L1MB2 LINE L1 -1296 5086 4747 595 265 101 86 chr2 100703199 100703488 -152553095 - L1MB2 LINE L1 -3245 3137 2854 1801 139 33 0 chr2 100703488 100703762 -152552821 - AluSx SINE Alu -18 294 12 595 265 101 86 chr2 100703762 100703793 -152552790 - L1MB2 LINE L1 -3528 2854 2825 2129 112 10 0 chr2 100703793 100704098 -152552485 - AluY SINE Alu -3 308 1 595 265 101 86 chr2 100704098 100705537 -152551046 - L1MB2 LINE L1 -3557 2825 1314 1368 224 14 7 chr2 100705537 100705823 -152550760 - AluJb SINE Alu -24 288 1 595 265 101 86 chr2 100705823 100705851 -152550732 - L1MB2 LINE L1 -5068 1314 1288 319 296 155 53 chr2 100705853 100706194 -152550389 - L1MB2 LINE L1 -4862 1451 1076 803 153 58 21 chr2 100710662 100710851 -152545732 - L1MA3 LINE L1 0 6305 6110 1877 163 3 7 chr2 100711484 100711790 -152544793 - AluSg SINE Alu -5 305 1 1941 131 3 3 chr2 100712483 100712765 -152543818 + AluSc SINE Alu 12 293 -16 442 234 80 6 chr2 100713507 100713682 -152542901 - L1MA8 LINE L1 -4 6287 6100 4316 237 68 23 chr2 100713742 100715489 -152541094 - L1MA8 LINE L1 -359 5941 4090 2229 98 7 0 chr2 100715489 100715786 -152540797 + AluY SINE Alu 1 299 -12 4316 237 68 23 chr2 100715786 100715989 -152540594 - L1MA8 LINE L1 -2210 4090 3897 5378 248 46 14 chr2 100716000 100718755 -152537828 + L1PA16 LINE L1 3310 6152 -14 1063 141 162 0 chr2 100718964 100719162 -152537421 - MER30 DNA MER1_type 0 230 1 31 44 0 0 chr2 100719802 100719847 -152536736 + AT_rich Low_complexity Low_complexity 1 45 0 21 0 0 0 chr2 100719916 100719937 -152536646 + AT_rich Low_complexity Low_complexity 1 21 0 1192 132 6 0 chr2 100720174 100720348 -152536235 - AluSx SINE Alu -137 175 1 2212 107 0 3 chr2 100721663 100721963 -152534620 + AluY SINE Alu 1 299 -12 21 36 0 0 chr2 100722167 100722195 -152534388 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 100722331 100722352 -152534231 + AT_rich Low_complexity Low_complexity 1 21 0 2191 109 0 0 chr2 100722799 100723092 -152533491 - AluSq SINE Alu -20 293 1 21 71 0 0 chr2 100723194 100723236 -152533347 + AT_rich Low_complexity Low_complexity 1 42 0 7870 90 4 2 chr2 100723292 100724361 -152532222 + MER11C LTR ERVK 1 1071 0 1897 132 10 14 chr2 100724923 100725219 -152531364 - AluSq SINE Alu -18 295 1 277 211 0 0 chr2 100725331 100725383 -152531200 - MER51D LTR ERV1 -106 551 500 183 100 0 0 chr2 100725809 100725839 -152530744 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 21 0 0 0 chr2 100726375 100726396 -152530187 + AT_rich Low_complexity Low_complexity 1 21 0 6600 150 18 7 chr2 100726462 100727608 -152528975 - THE1C-int LTR MaLR -158 1422 215 365 200 0 0 chr2 100727608 100727673 -152528910 - THE1C-int LTR MaLR -1515 65 1 1073 147 35 52 chr2 100727673 100727904 -152528679 - THE1C LTR MaLR 0 375 149 1209 120 3 0 chr2 100777904 100786065 -152470518 + ALR/Alpha Satellite centromeric 1 8182 -57 39133 51 21 3 chr2 100786068 100788122 -152468461 + L1PA2 LINE L1 14 2029 -4126 2802 13 0 0 chr2 100788122 100788426 -152468157 + AluYa5 SINE Alu 1 304 -7 39133 51 21 3 chr2 100788426 100792385 -152464198 + L1PA2 LINE L1 2029 6141 -14 1140 138 5 2 chr2 100792388 100794596 -152461987 + ALR/Alpha Satellite centromeric 1 2214 -19 11236 42 3 0 chr2 100794697 100796085 -152460498 - L1P LINE L1 -1248 4898 3507 1475 292 76 19 chr2 100796122 100796873 -152459710 - L1M4 LINE L1 -857 5289 4496 2727 92 3 0 chr2 100796898 100797269 -152459314 - L1PA8 LINE L1 -13 6159 5788 2696 133 48 0 chr2 100797287 100797761 -152458822 + L1P LINE L1 2808 3304 -2842 1309 130 0 0 chr2 100797791 100797975 -152458608 + AluSg/x SINE Alu 114 297 -15 3160 134 2 0 chr2 100797975 100798474 -152458109 + L1P LINE L1 3294 3793 -2353 321 298 149 30 chr2 100798587 100798755 -152457828 - L2 LINE L2 -1 3312 3125 1001 174 24 0 chr2 100798755 100798922 -152457661 + AluJo SINE Alu 120 290 -22 432 318 141 21 chr2 100798934 100799435 -152457148 - L2 LINE L2 -189 3124 2554 314 247 0 0 chr2 100799435 100799512 -152457071 - MER3 DNA MER1_type 0 209 133 880 182 68 10 chr2 100799516 100799708 -152456875 + L1MB4 LINE L1 5976 6178 -2 * 1708 216 48 16 chr2 100799696 100799747 -152456836 + L1M4 LINE L1 4971 5019 -1165 1381 196 0 11 chr2 100799747 100800023 -152456560 - L1PB4 LINE L1 -1 6155 5883 1708 216 48 16 chr2 100800023 100800480 -152456103 + L1M4 LINE L1 5019 5512 -672 1988 81 4 4 chr2 100800480 100800738 -152455845 + AluY SINE Alu 1 258 -53 1708 216 48 16 chr2 100800738 100800955 -152455628 + L1M4 LINE L1 5512 5720 -464 23 33 0 0 chr2 100801004 100801034 -152455549 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr2 100801526 100801550 -152455033 + AT_rich Low_complexity Low_complexity 1 24 0 34 0 0 0 chr2 100801843 100801877 -152454706 + AT_rich Low_complexity Low_complexity 1 34 0 387 324 63 9 chr2 100802029 100802344 -152454239 + L1ME4a LINE L1 5507 5838 -283 2351 73 7 7 chr2 100802635 100802938 -152453645 - AluY SINE Alu -8 303 1 344 375 79 34 chr2 100803094 100803422 -152453161 - L2 LINE L2 0 3272 2930 872 340 91 43 chr2 100803430 100804104 -152452479 + L1MEc LINE L1 365 1070 -5651 583 239 51 61 chr2 100804401 100804598 -152451985 + L1MEc LINE L1 2269 2463 -4258 * 1321 229 56 28 chr2 100804597 100805193 -152451390 + L1MEc LINE L1 2333 2957 -3583 361 366 91 25 chr2 100805486 100805806 -152450777 + L2 LINE L2 2032 2372 -942 23 0 0 0 chr2 100806015 100806038 -152450545 + AT_rich Low_complexity Low_complexity 1 23 0 26 50 0 0 chr2 100806107 100806147 -152450436 + AT_rich Low_complexity Low_complexity 1 40 0 827 272 47 0 chr2 100806351 100806564 -152450019 + MER58A DNA MER1_type 2 224 0 474 293 76 0 chr2 100806745 100806902 -152449681 + MLT1L LTR MaLR 122 290 -325 2617 158 73 19 chr2 100807657 100808176 -152448407 - LTR10A LTR ERV1 -62 547 1 7843 234 17 34 chr2 100808250 100810173 -152446410 - LTR10A-int LTR ERV1 -2 6647 4758 * 25325 190 34 30 chr2 100810171 100813462 -152443121 - HERVI LTR ERV1 -2575 5210 1890 2159 128 0 0 chr2 100813462 100813760 -152442823 + AluY SINE Alu 1 298 -13 25325 190 34 30 chr2 100813760 100815658 -152440925 - HERVI LTR ERV1 -5895 1890 1 2379 185 70 10 chr2 100815672 100816186 -152440397 - LTR10A LTR ERV1 -62 547 3 1947 137 6 19 chr2 100816463 100816777 -152439806 - AluSx SINE Alu 0 312 3 1686 180 42 64 chr2 100817774 100818222 -152438361 + Tigger2 DNA MER2_type 1 2718 0 384 124 0 0 chr2 100818274 100818340 -152438243 + FLAM SINE Alu 68 125 -8 26 50 0 0 chr2 100818341 100818381 -152438202 + AT_rich Low_complexity Low_complexity 1 40 0 29 60 0 0 chr2 100818553 100818603 -152437980 + AT_rich Low_complexity Low_complexity 1 50 0 371 174 0 0 chr2 100818852 100818921 -152437662 - LTR30 LTR ERV1 -102 620 552 21 82 0 0 chr2 100819185 100819234 -152437349 + AT_rich Low_complexity Low_complexity 1 49 0 219 349 94 7 chr2 100819457 100819606 -152436977 + MIR SINE MIR 57 218 -44 723 176 0 40 chr2 100819687 100819835 -152436748 + FLAM_C SINE Alu 1 142 -1 31 58 0 0 chr2 100819952 100820004 -152436579 + AT_rich Low_complexity Low_complexity 1 52 0 530 238 0 0 chr2 100820448 100820553 -152436030 - U6 snRNA snRNA -2 105 1 209 338 91 0 chr2 100822188 100822265 -152434318 + L2 LINE L2 3139 3222 -50 2106 128 3 7 chr2 100822798 100823102 -152433481 + AluSc SINE Alu 3 305 -4 22 70 0 0 chr2 100823510 100823553 -152433030 + AT_rich Low_complexity Low_complexity 1 43 0 309 280 137 23 chr2 100823608 100823827 -152432756 - MER102a DNA MER1_type -1 329 85 21 57 0 0 chr2 100824345 100824380 -152432203 + AT_rich Low_complexity Low_complexity 1 35 0 504 288 54 33 chr2 100824775 100825030 -152431553 + MIR SINE MIR 2 261 -1 322 285 18 36 chr2 100825122 100825287 -152431296 + MER104 DNA Tc2 1 162 -18 26 104 0 0 chr2 100825896 100825992 -152430591 + AT_rich Low_complexity Low_complexity 1 96 0 1959 128 3 0 chr2 100827294 100827582 -152429001 - AluSx SINE Alu -21 291 3 2321 60 33 23 chr2 100827584 100827907 -152428676 - AluY SINE Alu 0 311 1 206 232 29 29 chr2 100828924 100828993 -152427590 + C-rich Low_complexity Low_complexity 4 72 0 373 289 84 126 chr2 100829347 100830175 -152426408 - L1M2 LINE L1 -5583 1266 473 1046 235 16 12 chr2 100830326 100830569 -152426014 + AluJo SINE Alu 1 244 -68 440 182 0 0 chr2 100830570 100830647 -152425936 - L1MC/D LINE L1 -794 5539 5463 286 182 30 15 chr2 100830654 100830720 -152425863 + AluJo SINE Alu 233 299 -3 2758 204 171 60 chr2 100830992 100831413 -152425170 - L1MC3 LINE L1 -1061 7004 6631 2263 103 0 19 chr2 100831413 100831724 -152424859 - AluSq SINE Alu 0 313 9 2758 204 171 60 chr2 100831724 100831865 -152424718 - L1MC3 LINE L1 -1434 6631 6507 180 0 0 0 chr2 100831865 100831885 -152424698 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2758 204 171 60 chr2 100831885 100831951 -152424632 - L1MC3 LINE L1 -1558 6507 6450 2346 52 10 16 chr2 100831951 100832260 -152424323 + AluY SINE Alu 1 307 -4 2758 204 171 60 chr2 100832260 100832587 -152423996 - L1MC3 LINE L1 -1615 6450 6161 1598 144 3 89 chr2 100832587 100832913 -152423670 + AluSx SINE Alu 1 298 -14 2758 204 171 60 chr2 100832913 100833033 -152423550 - L1MC3 LINE L1 -1904 6161 5806 3521 251 71 19 chr2 100833054 100834427 -152422156 - L1MC3 LINE L1 -2063 4363 2919 1563 156 72 0 chr2 100834438 100834725 -152421858 - AluSx SINE Alu 0 306 1 302 255 75 99 chr2 100834725 100834886 -152421697 - L1MC3 LINE L1 -4103 2323 2167 681 227 254 15 chr2 100834890 100835295 -152421288 - L1MC3 LINE L1 -4212 2214 1713 581 239 25 0 chr2 100835304 100835463 -152421120 - L1MC/D LINE L1 -928 5416 5254 2116 188 93 36 chr2 100835471 100835997 -152420586 + L1MA9 LINE L1 5755 6310 -2 2262 110 0 0 chr2 100836475 100836775 -152419808 + AluSc SINE Alu 5 304 -5 1533 194 55 12 chr2 100837303 100837632 -152418951 - MER61A LTR ERV1 0 343 1 2299 85 7 0 chr2 100837975 100838281 -152418302 + AluY SINE Alu 1 308 -3 508 250 0 7 chr2 100838476 100838616 -152417967 + LTR37B LTR ERV1 130 268 -200 3932 201 39 39 chr2 100838814 100839816 -152416767 - L1MB4 LINE L1 0 6180 5187 2252 111 0 0 chr2 100839816 100840104 -152416479 - AluSg SINE Alu -20 290 3 3932 201 39 39 chr2 100840104 100840387 -152416196 - L1MB4 LINE L1 -993 5187 4905 2370 68 19 13 chr2 100840404 100840711 -152415872 - AluY SINE Alu -2 309 1 465 225 50 44 chr2 100840711 100840893 -152415690 + LTR37B LTR ERV1 262 444 -24 3195 207 37 78 chr2 100842331 100843342 -152413241 - LTR5 LTR ERVK 0 969 1 2116 143 0 9 chr2 100843411 100843547 -152413036 + AluSx SINE Alu 1 137 -175 1690 107 0 0 chr2 100843547 100843762 -152412821 + AluSg SINE Alu 1 215 -95 2116 143 0 9 chr2 100843762 100843940 -152412643 + AluSx SINE Alu 137 312 0 892 173 13 6 chr2 100843942 100844098 -152412485 + AluSg/x SINE Alu 134 290 -20 2113 125 0 3 chr2 100844455 100844752 -152411831 - AluSc SINE Alu -13 296 1 183 0 77 51 chr2 100845175 100845214 -152411369 + T-rich Low_complexity Low_complexity 2 41 0 22 0 0 0 chr2 100845666 100845688 -152410895 + AT_rich Low_complexity Low_complexity 1 22 0 210 389 36 7 chr2 100846135 100846274 -152410309 - L2 LINE L2 -786 2528 2386 5561 158 59 33 chr2 100846306 100846591 -152409992 + Tigger3b DNA MER2_type 1 277 -2751 2030 141 3 3 chr2 100846591 100846903 -152409680 - AluSx SINE Alu 0 312 1 5561 158 59 33 chr2 100846903 100847817 -152408766 + Tigger3b DNA MER2_type 277 1231 0 614 293 89 22 chr2 100847847 100848072 -152408511 - MIR SINE MIR -20 242 3 2382 88 0 7 chr2 100848195 100848502 -152408081 + AluY SINE Alu 3 307 -4 1906 147 40 0 chr2 100848524 100848824 -152407759 + AluSx SINE Alu 1 312 0 2012 119 7 11 chr2 100849173 100849504 -152407079 + AluSp SINE Alu 3 332 0 2168 106 10 0 chr2 100849558 100849859 -152406724 + AluY SINE Alu 1 304 -7 27 0 0 0 chr2 100850339 100850366 -152406217 + AT_rich Low_complexity Low_complexity 1 27 0 1855 143 42 3 chr2 100850494 100850780 -152405803 - AluSg SINE Alu -13 297 1 314 287 23 0 chr2 100851045 100851132 -152405451 + L1MC4 LINE L1 6615 6703 -1339 1152 132 6 0 chr2 100851431 100851598 -152404985 - AluSg/x SINE Alu -16 296 129 2179 119 3 0 chr2 100852169 100852472 -152404111 - AluY SINE Alu -7 304 1 1982 167 0 0 chr2 100853222 100853534 -152403049 + AluSx SINE Alu 1 312 0 405 0 0 0 chr2 100854538 100854583 -152402000 + (T)n Simple_repeat Simple_repeat 1 45 0 24 32 0 0 chr2 100854608 100854639 -152401944 + GC_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr2 100854650 100854671 -152401912 + GC_rich Low_complexity Low_complexity 1 21 0 636 191 20 20 chr2 100855142 100855289 -152401294 + AluSg/x SINE Alu 163 309 -3 1556 181 51 3 chr2 100856295 100856587 -152399996 - AluSx SINE Alu -6 306 1 949 90 0 0 chr2 100856587 100856709 -152399874 - AluY SINE Alu -177 134 13 1948 101 59 11 chr2 100856863 100857150 -152399433 - AluSq SINE Alu -12 301 1 2142 97 22 0 chr2 100857542 100857820 -152398763 + AluY SINE Alu 5 288 -23 258 250 0 83 chr2 100859122 100859230 -152397353 + MIR SINE MIR 120 218 -44 1644 252 159 16 chr2 100860064 100860827 -152395756 - L1ME2 LINE L1 -8 6156 5285 2153 94 0 11 chr2 100860830 100861116 -152395467 - AluY SINE Alu -9 302 20 876 344 71 26 chr2 100861310 100862406 -152394177 + HERV16 LTR ERVL 3046 3947 -1049 251 170 38 19 chr2 100862520 100862573 -152394010 + MLT1F LTR MaLR 406 459 -83 500 342 55 26 chr2 100862574 100862954 -152393629 + HERV16 LTR ERVL 4452 4842 -643 198 0 0 0 chr2 100863124 100863146 -152393437 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 267 54 0 0 chr2 100863145 100863182 -152393401 + (CA)n Simple_repeat Simple_repeat 1 37 0 655 296 140 8 chr2 100863581 100863831 -152392752 + LTR16B LTR ERVL 175 457 -7 1967 161 7 0 chr2 100864596 100864906 -152391677 + AluSx SINE Alu 1 312 0 2266 103 0 3 chr2 100864952 100865262 -152391321 + AluY SINE Alu 3 311 0 1390 188 103 0 chr2 100865284 100865566 -152391017 + AluSx SINE Alu 1 311 -1 1927 130 3 65 chr2 100865594 100865917 -152390666 + AluSg SINE Alu 1 303 -7 23 0 0 0 chr2 100867005 100867028 -152389555 + AT_rich Low_complexity Low_complexity 1 23 0 2224 87 0 0 chr2 100867358 100867828 -152388755 - AluY SINE Alu 0 470 1 1965 119 10 3 chr2 100867828 100868121 -152388462 - AluSq SINE Alu -18 295 1 1810 138 0 38 chr2 100868273 100868589 -152387994 + AluSc SINE Alu 1 305 0 214 171 0 0 chr2 100868602 100868637 -152387946 - MIR SINE MIR -29 233 199 1152 137 11 0 chr2 100868701 100868883 -152387700 - AluSg/x SINE Alu 0 312 129 14226 33 0 0 chr2 100869047 100871542 -152385041 + L1PA3 LINE L1 3670 6164 0 22 70 0 0 chr2 100871593 100871636 -152384947 + AT_rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr2 100871803 100871825 -152384758 + AT_rich Low_complexity Low_complexity 1 22 0 289 294 0 11 chr2 100871912 100872004 -152384579 + (TA)n Simple_repeat Simple_repeat 2 92 0 21 36 0 0 chr2 100872763 100872791 -152383792 + AT_rich Low_complexity Low_complexity 1 28 0 309 142 0 57 chr2 100873628 100873734 -152382849 + (TA)n Simple_repeat Simple_repeat 1 100 0 248 391 79 24 chr2 100873785 100874240 -152382343 - L2 LINE L2 -671 2643 2164 2038 132 26 0 chr2 100874547 100874851 -152381732 + AluSx SINE Alu 1 312 0 23 0 0 0 chr2 100875014 100875037 -152381546 + AT_rich Low_complexity Low_complexity 1 23 0 632 209 62 91 chr2 100875049 100875259 -152381324 + MIR SINE MIR 11 214 -48 217 247 86 62 chr2 100875289 100875370 -152381213 - MER5A DNA MER1_type -48 141 59 1020 296 25 36 chr2 100875375 100875845 -152380738 - MLT1C LTR MaLR 0 467 3 431 209 6 0 chr2 100877371 100877492 -152379091 + CER Satellite Satellite 1 121 -18 * 1353 130 2 1 chr2 100877490 100934525 -152322058 + ALR/Alpha Satellite centromeric 1 57130 -57 39060 50 21 5 chr2 100934528 100936582 -152320001 + L1PA2 LINE L1 14 2032 -4123 2858 16 0 0 chr2 100936582 100936893 -152319690 + AluYa5 SINE Alu 1 311 0 39060 50 21 5 chr2 100936893 100940863 -152315720 + L1PA2 LINE L1 2032 6141 -14 1140 148 3 1 chr2 100940866 100944460 -152312123 + ALR/Alpha Satellite centromeric 1 3600 0 24 53 0 0 chr2 100946503 100946541 -152310042 + AT_rich Low_complexity Low_complexity 1 38 0 210 139 0 0 chr2 100946789 100946825 -152309758 + (TTGG)n Simple_repeat Simple_repeat 1 36 0 704 157 0 0 chr2 100946837 100946945 -152309638 - AluSq/x SINE Alu -205 108 1 1182 122 25 0 chr2 100946973 100947170 -152309413 - SVA Other Other -730 656 455 226 51 231 0 chr2 100947176 100947215 -152309368 + LTR7 LTR ERV1 90 137 -313 397 213 104 37 chr2 100947347 100947511 -152309072 + LTR7 LTR ERV1 238 412 -38 1116 160 5 2 chr2 100947516 100958457 -152298126 + ALR/Alpha Satellite centromeric 1 10974 -43 596 100 0 0 chr2 100958450 100958588 -152297995 + CER Satellite Satellite 1 138 -36 * 739 132 3 0 chr2 100958691 100963483 -152293100 + CER Satellite Satellite 1 4802 -5 1069 154 3 0 chr2 100963608 100968422 -152288161 + ALR/Alpha Satellite centromeric 1 4825 -6 1185 128 2 2 chr2 100968435 100969453 -152287130 + ALR/Alpha Satellite centromeric 1 1018 -1 1235 151 2 1 chr2 100969562 100974108 -152282475 + ALR/Alpha Satellite centromeric 1 4550 0 287 321 0 0 chr2 100974108 100974189 -152282394 - SUBTEL_sa Satellite Satellite -85 89 9 24 53 0 0 chr2 100975933 100975971 -152280612 + AT_rich Low_complexity Low_complexity 1 38 0 210 139 0 0 chr2 100976219 100976255 -152280328 + (TTGG)n Simple_repeat Simple_repeat 1 36 0 704 157 0 0 chr2 100976267 100976375 -152280208 - AluSq/x SINE Alu -204 108 1 1182 122 25 0 chr2 100976403 100976600 -152279983 - SVA Other Other -730 656 455 226 51 231 0 chr2 100976606 100976645 -152279938 + LTR7 LTR ERV1 90 137 -313 397 213 104 37 chr2 100976777 100976941 -152279642 + LTR7 LTR ERV1 238 412 -38 1039 172 4 1 chr2 100976945 100979902 -152276681 + ALR/Alpha Satellite centromeric 1 2964 -50 1324 127 4 1 chr2 100980255 100995695 -152260888 + ALR/Alpha Satellite centromeric 1 15485 0 1326 263 119 5 chr2 101196085 101196515 -152060068 + MLT1D LTR MaLR 27 505 0 340 317 66 12 chr2 101197084 101197251 -152059332 + MIR SINE MIR 23 198 -64 1181 161 47 47 chr2 101197378 101197614 -152058969 - LTR19B LTR ERV1 -344 236 1 722 304 77 9 chr2 101197701 101198040 -152058543 - LTR16C LTR ERVL -37 454 93 692 249 108 17 chr2 101200691 101200932 -152055651 - LTR48B LTR ERV1 0 644 382 550 121 0 0 chr2 101201212 101201295 -152055288 - LTR39 LTR ERV1 -150 633 551 2620 80 74 0 chr2 101201677 101202028 -152054555 - MER51B LTR ERV1 0 377 1 303 257 88 0 chr2 101202657 101202770 -152053813 - L1ME3A LINE L1 -43 6127 6005 3833 199 53 10 chr2 101202812 101203580 -152053003 - MLT1A1-int LTR MaLR -934 801 1 1431 201 53 39 chr2 101203580 101203939 -152052644 - MLT1A1 LTR MaLR 0 365 2 844 111 17 0 chr2 101205256 101205373 -152051210 - Charlie3 DNA MER1_type -8 2702 2584 273 29 0 0 chr2 101205373 101205407 -152051176 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 983 43 0 0 chr2 101205409 101205525 -152051058 - AluY SINE Alu -32 279 164 233 194 0 125 chr2 101206009 101206081 -152050502 + MER97b DNA MER1_type? 117 179 -874 393 215 163 7 chr2 101206228 101206363 -152050220 - MLT1H LTR MaLR -313 236 81 931 221 48 44 chr2 101206761 101207010 -152049573 + MLT1A1 LTR MaLR 116 365 0 3838 205 36 1 chr2 101207010 101207784 -152048799 + MLT1A1-int LTR MaLR 1 801 -934 338 268 70 21 chr2 101207826 101207968 -152048615 + L1ME3A LINE L1 6005 6153 -17 22 35 0 0 chr2 101207991 101208020 -152048563 + AT_rich Low_complexity Low_complexity 1 29 0 329 186 196 0 chr2 101209452 101209549 -152047034 + MIR SINE MIR 28 143 -119 228 111 0 28 chr2 101209586 101209622 -152046961 - MER53 DNA DNA 0 189 155 2137 122 0 0 chr2 101209983 101210269 -152046314 + AluSx SINE Alu 1 286 -26 223 353 73 27 chr2 101210390 101210540 -152046043 - L3b LINE CR1 -16 1567 1411 270 170 0 0 chr2 101210869 101210916 -152045667 + L2 LINE L2 3267 3313 0 767 219 36 67 chr2 101211346 101211570 -152045013 + MER20 DNA MER1_type 3 219 0 7813 146 15 1 chr2 101212509 101213992 -152042591 - L1PA11 LINE L1 -4 6170 4652 216 0 0 0 chr2 101213992 101214016 -152042567 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7813 146 15 1 chr2 101214016 101214599 -152041984 - L1PA11 LINE L1 -1522 4652 4079 251 174 9 4 chr2 101214620 101214676 -152041907 - L1ME3A LINE L1 -302 5819 5776 348 24 0 0 chr2 101215467 101215508 -152041075 + (TG)n Simple_repeat Simple_repeat 2 42 0 555 236 79 25 chr2 101216411 101216614 -152039969 + LTR49 LTR ERV1 382 595 0 248 338 14 0 chr2 101216614 101216753 -152039830 + (CATA)n Simple_repeat Simple_repeat 2 142 0 231 359 0 9 chr2 101217638 101217744 -152038839 + 5S rRNA rRNA 17 121 0 406 164 14 0 chr2 101218791 101218864 -152037719 - LTR24C LTR ERV1 0 635 562 1799 168 0 16 chr2 101219090 101219393 -152037190 - AluJb SINE Alu -14 298 1 43 20 0 0 chr2 101220136 101220186 -152036397 + AT_rich Low_complexity Low_complexity 1 50 0 642 308 65 38 chr2 101220186 101220631 -152035952 + MLT1J LTR MaLR 39 495 -16 2018 81 14 24 chr2 101220692 101220987 -152035596 - L1PA12 LINE L1 0 6168 5877 1198 157 42 5 chr2 101221088 101221305 -152035278 - L1M3 LINE L1 -609 5562 5338 383 270 74 13 chr2 101221321 101221462 -152035121 - L1MD3 LINE L1 -1261 6734 6617 23 78 0 0 chr2 101222728 101222779 -152033804 + AT_rich Low_complexity Low_complexity 1 51 0 205 160 40 53 chr2 101222807 101222882 -152033701 + (CAGAGA)n Simple_repeat Simple_repeat 2 75 0 826 199 126 65 chr2 101222882 101222900 -152033683 - MLT2B1 LTR ERVL -20 534 519 1661 115 0 0 chr2 101222900 101223118 -152033465 - AluSq SINE Alu -45 268 51 826 199 126 65 chr2 101223118 101223383 -152033200 - MLT2B1 LTR ERVL -35 519 184 3426 212 19 23 chr2 101223919 101224605 -152031978 + L1M4 LINE L1 3576 4260 -1886 2040 159 0 3 chr2 101224605 101224913 -152031670 + AluSx SINE Alu 1 307 -5 3426 212 19 23 chr2 101224913 101225052 -152031531 + L1M4 LINE L1 4260 4398 -1748 * 5696 155 31 12 chr2 101225040 101226086 -152030497 + L1 LINE L1 4022 5087 -1059 198 0 0 0 chr2 101226086 101226108 -152030475 + (TTCC)n Simple_repeat Simple_repeat 3 24 0 22 35 0 0 chr2 101226636 101226665 -152029918 + GC_rich Low_complexity Low_complexity 1 29 0 781 139 102 112 chr2 101227903 101228118 -152028465 - MER20 DNA MER1_type -3 216 4 715 188 21 7 chr2 101230707 101230851 -152025732 + AluJb SINE Alu 167 312 0 1826 184 0 0 chr2 101230900 101231194 -152025389 - AluJb SINE Alu -18 294 1 229 250 33 0 chr2 101231892 101231952 -152024631 - MLT1K LTR MaLR -2 586 525 263 57 0 0 chr2 101231969 101232004 -152024579 + MER45R DNA AcHobo 1294 1328 -253 962 66 8 0 chr2 101232004 101232125 -152024458 + AluSq/x SINE Alu 1 122 -190 874 198 82 17 chr2 101232126 101232358 -152024225 + MER45R DNA AcHobo 1335 1581 0 2166 137 0 0 chr2 101232450 101232750 -152023833 + AluSx SINE Alu 1 300 -12 304 139 0 0 chr2 101232751 101232794 -152023789 + MER8 DNA MER2_type 183 225 -14 1466 183 21 66 chr2 101232813 101233147 -152023436 - MLT1B LTR MaLR -71 319 1 205 175 35 18 chr2 101233194 101233251 -152023332 + A-rich Low_complexity Low_complexity 3 60 0 568 179 131 14 chr2 101233527 101233672 -152022911 - MER65A LTR ERV1 -27 418 257 2633 57 0 0 chr2 101233672 101233973 -152022610 + AluY SINE Alu 1 301 -10 1156 119 12 0 chr2 101233974 101234142 -152022441 + AluSg/x SINE Alu 134 303 -9 645 237 57 57 chr2 101234327 101234482 -152022101 + L1ME3A LINE L1 5886 6040 -130 3030 154 17 55 chr2 101234482 101234539 -152022044 + MER41D LTR ERV1 1 59 -498 2078 140 0 0 chr2 101234539 101234839 -152021744 - AluJb SINE Alu -8 304 5 3030 154 17 55 chr2 101234839 101234853 -152021730 + MER41D LTR ERV1 59 72 -485 2387 71 24 0 chr2 101234853 101235148 -152021435 - AluY SINE Alu -9 302 1 3030 154 17 55 chr2 101235148 101235328 -152021255 + MER41D LTR ERV1 72 257 -300 1956 149 0 7 chr2 101235328 101235629 -152020954 + AluJb SINE Alu 5 303 -9 333 0 0 0 chr2 101235629 101235666 -152020917 + (TA)n Simple_repeat Simple_repeat 1 37 0 414 0 0 0 chr2 101235665 101235711 -152020872 + (GA)n Simple_repeat Simple_repeat 2 47 0 3030 154 17 55 chr2 101235666 101236035 -152020548 + MER41D LTR ERV1 255 557 0 645 237 57 57 chr2 101236035 101236124 -152020459 + L1ME3A LINE L1 6039 6130 -40 353 220 127 27 chr2 101236298 101236448 -152020135 + MIR SINE MIR 86 250 -12 792 165 0 0 chr2 101236529 101236656 -152019927 + FLAM_C SINE Alu 1 127 -6 1138 77 0 0 chr2 101236672 101236815 -152019768 + U4 snRNA snRNA 1 143 -2 584 157 87 0 chr2 101236838 101236953 -152019630 + FLAM_A SINE Alu 12 136 -6 213 138 379 0 chr2 101238293 101238351 -152018232 - MER5A DNA MER1_type -83 106 27 339 129 171 0 chr2 101240153 101240223 -152016360 - MER5A DNA MER1_type -82 107 26 325 153 167 0 chr2 101242033 101242105 -152014478 - MER5A DNA MER1_type -83 106 23 24 0 0 0 chr2 101243711 101243735 -152012848 + AT_rich Low_complexity Low_complexity 1 24 0 278 225 169 0 chr2 101243935 101244006 -152012577 - MER5A DNA MER1_type -83 106 24 326 172 0 0 chr2 101245812 101245870 -152010713 - MER5A DNA MER1_type -108 81 24 283 182 182 0 chr2 101247671 101247737 -152008846 - MER5A DNA MER1_type -82 107 30 282 197 169 0 chr2 101249624 101249695 -152006888 - MER5A DNA MER1_type -83 106 24 250 176 191 0 chr2 101251500 101251568 -152005015 - MER5A DNA MER1_type -83 106 26 332 181 167 0 chr2 101253377 101253449 -152003134 - MER5A DNA MER1_type -83 106 23 295 239 14 0 chr2 101255268 101255339 -152001244 - MER5A DNA MER1_type -109 80 9 333 186 0 0 chr2 101257147 101257206 -151999377 - MER5A DNA MER1_type -108 81 23 314 157 171 0 chr2 101258998 101259068 -151997515 - MER5A DNA MER1_type -82 107 26 21 0 0 0 chr2 101260615 101260636 -151995947 + AT_rich Low_complexity Low_complexity 1 21 0 2269 112 3 0 chr2 101260973 101261285 -151995298 - AluSp SINE Alu 0 313 1 243 0 0 0 chr2 101261555 101261582 -151995001 + (TG)n Simple_repeat Simple_repeat 2 28 0 5025 171 21 2 chr2 101261594 101262518 -151994065 - L1MA3 LINE L1 0 6305 5365 468 186 29 10 chr2 101262905 101263007 -151993576 + MER4A LTR ERV1 1 104 -560 * 1746 142 20 28 chr2 101263003 101263348 -151993235 + MER4A LTR ERV1 262 664 0 1862 236 34 14 chr2 101263353 101263858 -151992725 - L1MB8 LINE L1 -111 6067 5553 21 0 0 0 chr2 101264435 101264456 -151992127 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr2 101265508 101265529 -151991054 + (TTTTG)n Simple_repeat Simple_repeat 3 23 0 401 249 76 91 chr2 101265530 101265727 -151990856 - MER21B LTR ERV1 -369 494 301 2235 125 0 0 chr2 101265728 101266040 -151990543 - AluSx SINE Alu 0 312 1 422 284 32 44 chr2 101267275 101267525 -151989058 - L1MB8 LINE L1 -990 5156 4910 1183 240 23 41 chr2 101267556 101267898 -151988685 + MLT1A1 LTR MaLR 1 336 -29 759 268 42 82 chr2 101267926 101268377 -151988206 - L1MB8 LINE L1 -1265 4881 4449 473 281 118 30 chr2 101268780 101268983 -151987600 - MLT1G1 LTR MaLR -365 230 10 225 214 0 0 chr2 101269116 101269158 -151987425 + L1M3c LINE L1 1 42 -6099 30 45 0 0 chr2 101270111 101270155 -151986428 + AT_rich Low_complexity Low_complexity 1 44 0 711 274 60 32 chr2 101270172 101270574 -151986009 + L1MEc LINE L1 1386 1798 -4598 462 279 97 41 chr2 101270582 101270851 -151985732 + L1ME3 LINE L1 5878 6161 -1 1528 206 0 16 chr2 101272190 101272496 -151984087 - AluJb SINE Alu -7 305 5 509 29 29 0 chr2 101272743 101272813 -151983770 + (TAGA)n Simple_repeat Simple_repeat 3 74 0 1992 113 7 10 chr2 101272851 101273142 -151983441 - AluSx SINE Alu -22 290 1 3117 56 0 8 chr2 101277137 101277531 -151979052 - L1PA4 LINE L1 -97 6058 5668 881 30 0 0 chr2 101277531 101277617 -151978966 + L1PA4 LINE L1 6052 6152 -3 29 0 0 0 chr2 101277617 101277646 -151978937 + AT_rich Low_complexity Low_complexity 1 29 0 759 222 81 120 chr2 101279539 101279666 -151976917 + MLT1A2 LTR MaLR 1 131 -243 2372 76 0 0 chr2 101279666 101279991 -151976592 - AluY SINE Alu 0 311 2 759 222 81 120 chr2 101279991 101280246 -151976337 + MLT1A2 LTR MaLR 131 368 -6 256 274 0 0 chr2 101280998 101281071 -151975512 - MER41B LTR ERV1 -404 231 159 207 209 23 0 chr2 101281517 101281560 -151975023 + GA-rich Low_complexity Low_complexity 2 45 0 780 289 137 40 chr2 101281614 101282067 -151974516 + MLT1D LTR MaLR 9 505 0 278 246 138 77 chr2 101282379 101282509 -151974074 - MIR SINE MIR -67 141 48 508 289 111 16 chr2 101283262 101283577 -151973006 - LTR16C LTR ERVL -78 413 69 252 247 34 56 chr2 101286143 101286232 -151970351 - MLT2E LTR ERVL -497 131 45 814 181 0 0 chr2 101286734 101286872 -151969711 + AluSq SINE Alu 143 280 -33 34 24 0 0 chr2 101287524 101287565 -151969018 + AT_rich Low_complexity Low_complexity 1 41 0 274 317 0 14 chr2 101287596 101287741 -151968842 + (TA)n Simple_repeat Simple_repeat 2 144 0 402 220 28 35 chr2 101288340 101288481 -151968102 + L1ME1 LINE L1 6024 6163 -3 335 222 0 49 chr2 101288799 101288880 -151967703 + FAM SINE Alu 103 179 0 23 54 0 0 chr2 101288883 101288920 -151967663 + AT_rich Low_complexity Low_complexity 1 37 0 362 241 0 6 chr2 101289097 101289259 -151967324 + (TA)n Simple_repeat Simple_repeat 1 161 0 226 290 48 7 chr2 101289294 101289439 -151967144 - L1M4 LINE L1 -2413 3733 3583 2751 156 9 0 chr2 101289705 101290209 -151966374 - MSTA-int LTR MaLR -1144 507 1 524 176 0 0 chr2 101290209 101290294 -151966289 - MSTA LTR MaLR 0 428 344 770 176 7 0 chr2 101290294 101290430 -151966153 + L1MB8 LINE L1 5618 5754 -420 1618 183 37 15 chr2 101290434 101290762 -151965821 + L1MB8 LINE L1 5833 6167 -11 218 225 0 0 chr2 101291201 101291241 -151965342 - L2 LINE L2 -39 3274 3235 2973 106 0 7 chr2 101291322 101291729 -151964854 - MER4A LTR ERV1 0 664 261 631 141 0 10 chr2 101291729 101291828 -151964755 - MER4A LTR ERV1 -566 98 1 817 99 0 0 chr2 101292406 101292517 -151964066 + MSTB LTR MaLR 1 111 -315 * 818 143 0 8 chr2 101292516 101292642 -151963941 - LTR1B LTR ERV1 -701 125 1 342 322 16 16 chr2 101293258 101293379 -151963204 + L3b LINE CR1 1180 1300 -283 200 336 143 14 chr2 101298054 101298194 -151958389 - L2 LINE L2 -25 3247 3090 3013 176 121 161 chr2 101299245 101300199 -151956384 + L1MC4a LINE L1 6481 7472 -336 1548 178 14 20 chr2 101300199 101300492 -151956091 - AluJb SINE Alu -21 291 1 3013 176 121 161 chr2 101300492 101300507 -151956076 + L1MC4a LINE L1 7472 7486 -322 2169 133 0 0 chr2 101300507 101300808 -151955775 - AluSx SINE Alu -11 301 1 3013 176 121 161 chr2 101300808 101301209 -151955374 + L1MC4a LINE L1 7486 7797 -11 888 185 25 0 chr2 101301210 101301372 -151955211 + AluJo SINE Alu 122 287 -25 299 275 134 28 chr2 101301400 101301542 -151955041 + MIR SINE MIR 20 176 -86 1424 210 188 8 chr2 101301552 101301604 -151954979 + L1MC4 LINE L1 6866 6907 -1135 2444 67 0 0 chr2 101301604 101301888 -151954695 + AluY SINE Alu 1 284 -27 1424 210 188 8 chr2 101301888 101302574 -151954009 + L1MC4 LINE L1 6907 7900 -142 785 170 73 0 chr2 101302818 101302983 -151953600 - MER5B DNA MER1_type -1 177 1 1655 174 107 74 chr2 101303009 101303079 -151953504 - MLT1D LTR MaLR 0 505 439 2354 68 3 14 chr2 101303079 101303375 -151953208 + AluY SINE Alu 1 293 -18 1655 174 107 74 chr2 101303375 101303792 -151952791 - MLT1D LTR MaLR -66 439 2 979 202 0 6 chr2 101303813 101303996 -151952587 - FRAM SINE Alu -2 174 1 321 211 149 66 chr2 101304659 101304887 -151951696 - L1MC5 LINE L1 -323 7638 7392 244 182 20 141 chr2 101305641 101305740 -151950843 - MIR3 SINE MIR -36 172 86 241 212 45 61 chr2 101305798 101305864 -151950719 + L2 LINE L2 3242 3306 -7 194 0 39 0 chr2 101306198 101306224 -151950359 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 2494 63 0 0 chr2 101306662 101306961 -151949622 - AluSq SINE Alu -14 299 1 418 226 0 0 chr2 101307479 101307563 -151949020 + L1PA12 LINE L1 814 897 -6684 523 175 21 0 chr2 101307569 101307666 -151948917 + L1PA12 LINE L1 799 897 -6684 451 221 0 0 chr2 101307692 101307778 -151948805 + L1PA12 LINE L1 814 899 -6682 383 248 29 9 chr2 101307781 101307886 -151948697 + L1PA12 LINE L1 798 904 -6677 360 261 22 0 chr2 101307886 101307978 -151948605 + L1PA12 LINE L1 799 892 -6689 591 230 253 37 chr2 101308002 101308298 -151948285 + L1PA12 LINE L1 814 1173 -6408 591 248 103 80 chr2 101308311 101308901 -151947682 + L1PA12 LINE L1 799 1170 -6411 378 263 0 0 chr2 101308921 101309001 -151947582 + L1PA12 LINE L1 814 893 -6688 356 193 61 88 chr2 101309001 101309115 -151947468 + L1PA12 LINE L1 784 894 -6687 497 184 29 0 chr2 101309124 101309227 -151947356 + L1PA12 LINE L1 799 904 -6677 491 255 53 77 chr2 101309227 101309889 -151946694 + L1PA12 LINE L1 799 1174 -6407 402 214 0 11 chr2 101309902 101309991 -151946592 + L1PA12 LINE L1 814 901 -6680 266 216 0 113 chr2 101310009 101310106 -151946477 + L1PA12 LINE L1 818 903 -6678 1229 244 39 4 chr2 101310106 101310385 -151946198 + L1PA12 LINE L1 802 1090 -6491 3155 193 88 8 chr2 101310389 101311090 -151945493 - L1PA12 LINE L1 -6415 1166 5 204 278 69 14 chr2 101311268 101311340 -151945243 + MIR SINE MIR 100 175 -87 19964 164 24 9 chr2 101311382 101315154 -151941429 + L1PA10 LINE L1 6 3827 -3757 3633 211 26 20 chr2 101315152 101316946 -151939637 + L1PA12 LINE L1 1125 2977 -4604 * 563 80 0 0 chr2 101316946 101317021 -151939562 - L1P3 LINE L1 -4918 1543 1469 * 10414 171 17 5 chr2 101317019 101318966 -151937617 + L1P LINE L1 1215 3184 -2962 7541 713 151 48 chr2 101318958 101318970 -151937613 + L1PA10 LINE L1 3813 3822 -3784 * 7541 120 18 2 chr2 101318970 101319749 -151936834 + L1PA10 LINE L1 5592 6357 -1249 2163 118 0 0 chr2 101319749 101320054 -151936529 - AluSc SINE Alu 0 305 1 7541 120 18 2 chr2 101320054 101321315 -151935268 + L1PA10 LINE L1 6357 7606 0 7541 713 151 48 chr2 101321315 101322578 -151934005 + L1PA10 LINE L1 3822 4954 -2652 468 0 0 0 chr2 101322578 101322630 -151933953 + (CA)n Simple_repeat Simple_repeat 2 53 0 7541 713 151 48 chr2 101322630 101322946 -151933637 + L1PA10 LINE L1 4954 7606 0 3237 161 148 20 chr2 101322937 101323647 -151932936 - L1P LINE L1 -1356 4790 3990 * 225 237 165 31 chr2 101323769 101323866 -151932717 - L2 LINE L2 -775 2539 2430 204 40 0 0 chr2 101327026 101327051 -151929532 + (CAT)n Simple_repeat Simple_repeat 2 26 0 455 259 85 36 chr2 101327065 101327289 -151929294 - MIR SINE MIR -25 237 3 680 182 0 0 chr2 101328504 101328614 -151927969 + AluJb SINE Alu 2 111 -201 1788 140 33 0 chr2 101328616 101328888 -151927695 + MSTA LTR MaLR 1 281 -147 965 229 15 11 chr2 101329059 101329326 -151927257 + L1MC3 LINE L1 7511 7778 -7 1792 143 0 84 chr2 101329585 101329907 -151926676 - AluSx SINE Alu -17 295 1 1173 205 112 19 chr2 101329992 101330250 -151926333 + AluJb SINE Alu 4 285 -17 213 39 0 0 chr2 101330250 101330276 -151926307 + (TAGA)n Simple_repeat Simple_repeat 4 29 0 187 285 232 13 chr2 101330414 101330565 -151926018 - MIR SINE MIR -2 260 77 273 29 0 0 chr2 101330754 101330788 -151925795 + (TG)n Simple_repeat Simple_repeat 1 34 0 210 233 0 0 chr2 101331281 101331324 -151925259 + CT-rich Low_complexity Low_complexity 3 45 0 592 202 8 8 chr2 101331547 101331666 -151924917 - FLAM_C SINE Alu 0 143 25 213 163 265 41 chr2 101332196 101332294 -151924289 + MER5C DNA MER1_type 5 124 -200 26 116 0 0 chr2 101332563 101332701 -151923882 + AT_rich Low_complexity Low_complexity 1 138 0 35 107 0 0 chr2 101332822 101332962 -151923621 + AT_rich Low_complexity Low_complexity 1 140 0 6981 41 12 5 chr2 101333855 101334710 -151921873 - L1P LINE L1 -1311 4835 3975 5412 46 1 0 chr2 101334708 101335828 -151920755 + L1PA5 LINE L1 4788 5908 -246 * 13878 139 48 27 chr2 101335928 101336413 -151920170 - L1P4 LINE L1 -346 7255 6782 2262 122 0 0 chr2 101336413 101336725 -151919858 - AluSx SINE Alu 0 312 1 13878 139 48 27 chr2 101336725 101337746 -151918837 - L1P4 LINE L1 -819 6782 5784 2150 104 0 13 chr2 101337746 101338045 -151918538 + AluSc SINE Alu 1 295 -14 13878 139 48 27 chr2 101338045 101339109 -151917474 - L1P4 LINE L1 -1817 5784 4589 252 0 0 0 chr2 101339109 101339137 -151917446 + (TG)n Simple_repeat Simple_repeat 2 29 0 13878 139 48 27 chr2 101339137 101339447 -151917136 - L1P4 LINE L1 -3012 4589 4287 828 167 0 0 chr2 101339462 101339600 -151916983 - L1P4 LINE L1 -4163 3421 3284 * 1428 169 0 16 chr2 101339598 101339847 -151916736 - L1P4 LINE L1 -7336 245 1 7475 43 0 0 chr2 101340724 101342096 -151914487 - L1PA5 LINE L1 0 6154 4788 1676 27 0 0 chr2 101342096 101342284 -151914299 + L1P LINE L1 3977 4164 -1982 288 125 33 0 chr2 101342384 101342436 -151914147 - L1PA12 LINE L1 -6437 1144 815 538 138 11 0 chr2 101342450 101342537 -151914046 - L1PA12 LINE L1 -6678 903 816 544 227 31 103 chr2 101342558 101342963 -151913620 - L1PA12 LINE L1 -6414 1167 799 519 161 0 0 chr2 101342966 101343053 -151913530 - L1PA12 LINE L1 -6681 900 814 426 195 0 0 chr2 101343082 101343159 -151913424 - L1PA12 LINE L1 -6695 886 810 256 203 51 0 chr2 101343168 101343227 -151913356 - L1PA12 LINE L1 -6677 904 843 951 193 57 130 chr2 101343230 101343706 -151912877 + L1PA12 LINE L1 734 1174 -6407 1302 238 104 33 chr2 101343719 101344508 -151912075 + L1PA12 LINE L1 797 1627 -5954 1994 201 80 43 chr2 101344511 101344887 -151911696 - L1PA12 LINE L1 -6415 1166 763 2156 135 0 0 chr2 101344887 101345199 -151911384 + AluSx SINE Alu 1 312 0 1994 201 80 43 chr2 101345199 101345359 -151911224 - L1PA12 LINE L1 -6818 763 610 2075 231 100 6 chr2 101345705 101346704 -151909879 + L1M4 LINE L1 4472 5574 -745 746 203 155 5 chr2 101346717 101346904 -151909679 - MSTB-int LTR MaLR -1434 217 3 1779 204 21 71 chr2 101346957 101347393 -151909190 - MSTB LTR MaLR -12 414 1 4635 243 61 37 chr2 101347394 101348707 -151907876 - L1M4c LINE L1 -4516 2137 882 9808 148 52 55 chr2 101348712 101350665 -151905918 + Tigger1 DNA MER2_type 472 2418 0 7581 254 54 20 chr2 101350665 101351297 -151905286 + L1M3b LINE L1 2273 2882 -4683 180 111 0 0 chr2 101351297 101351324 -151905259 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7581 254 54 20 chr2 101351324 101351349 -151905234 + L1M3b LINE L1 2882 2905 -4660 1968 123 0 58 chr2 101351349 101351657 -151904926 + AluSg SINE Alu 1 290 -20 7581 254 54 20 chr2 101351657 101353597 -151902986 + L1M3b LINE L1 2905 5016 -2549 2091 138 0 3 chr2 101353597 101353894 -151902689 - AluSq SINE Alu -17 296 1 7581 254 54 20 chr2 101353894 101355494 -151901089 + L1M3b LINE L1 5016 6560 -1005 2058 100 40 10 chr2 101357203 101357502 -151899081 + AluY SINE Alu 1 308 -3 2117 129 7 10 chr2 101357684 101357986 -151898597 - AluSx SINE Alu -9 303 3 3489 154 15 11 chr2 101358072 101358597 -151897986 - MER1A DNA MER1_type 0 527 1 2118 150 38 3 chr2 101360347 101360693 -151895890 + MER46B DNA MER2_type 2 234 -2 298 172 178 0 chr2 101361282 101361355 -151895228 + L1M4 LINE L1 5728 5813 -371 838 223 22 11 chr2 101361401 101361585 -151894998 + MER58A DNA MER1_type 39 224 0 22 56 0 0 chr2 101362504 101362540 -151894043 + AT_rich Low_complexity Low_complexity 1 36 0 26 30 0 0 chr2 101362575 101362608 -151893975 + AT_rich Low_complexity Low_complexity 1 33 0 22 56 0 0 chr2 101362634 101362670 -151893913 + AT_rich Low_complexity Low_complexity 1 36 0 344 335 59 0 chr2 101363322 101363492 -151893091 + L2 LINE L2 2726 2905 -409 21 57 0 0 chr2 101363614 101363649 -151892934 + AT_rich Low_complexity Low_complexity 1 35 0 26 50 0 0 chr2 101366191 101366231 -151890352 + AT_rich Low_complexity Low_complexity 1 40 0 5706 78 19 3 chr2 101366594 101367348 -151889235 + MER4E LTR ERV1 1 766 0 1987 134 7 3 chr2 101368099 101368397 -151888186 - AluSg SINE Alu -11 299 1 21 0 0 0 chr2 101368398 101368419 -151888164 + AT_rich Low_complexity Low_complexity 1 21 0 375 291 108 46 chr2 101368440 101368763 -151887820 + L1ME4a LINE L1 5523 5865 -256 198 0 0 0 chr2 101369388 101369410 -151887173 + (A)n Simple_repeat Simple_repeat 1 22 0 210 373 45 0 chr2 101369454 101369564 -151887019 - L2 LINE L2 -220 3052 2938 1164 289 55 58 chr2 101369585 101370191 -151886392 + L1MEc LINE L1 40 643 -5753 242 267 17 9 chr2 101370275 101370391 -151886192 + L1MEc LINE L1 1010 1126 -5270 1609 209 35 41 chr2 101370547 101371756 -151884827 + L1MEc LINE L1 1953 3206 -3009 1551 197 42 18 chr2 101371757 101372092 -151884491 + MLT1A1 LTR MaLR 1 343 -22 1387 244 40 16 chr2 101372102 101372597 -151883986 + L1MEc LINE L1 3234 3740 -2475 2518 199 51 17 chr2 101372714 101373301 -151883282 + L1MC1 LINE L1 5727 6333 0 1626 256 34 17 chr2 101373299 101373768 -151882815 + L1MEc LINE L1 3800 4276 -1939 * 630 221 15 0 chr2 101373831 101373962 -151882621 + MER58B DNA MER1_type 176 308 -33 1136 198 53 154 chr2 101374008 101374625 -151881958 + L1MEc LINE L1 4295 4848 -1367 1829 152 100 6 chr2 101374625 101374955 -151881628 - MER46B DNA MER2_type 0 236 1 1136 198 53 154 chr2 101374955 101374972 -151881611 + L1MEc LINE L1 4848 4865 -1350 255 188 146 0 chr2 101374973 101375021 -151881562 + Tigger5 DNA MER2_type 1 55 -2268 1964 228 35 18 chr2 101375088 101375874 -151880709 + L1MEc LINE L1 4866 5666 -645 584 253 0 13 chr2 101375890 101376040 -151880543 + L1MA10 LINE L1 6176 6323 -11 273 307 68 62 chr2 101376156 101376348 -151880235 - L2 LINE L2 -572 2742 2550 23 33 0 0 chr2 101378291 101378321 -151878262 + AT_rich Low_complexity Low_complexity 1 30 0 44758 43 1 1 chr2 101378680 101384829 -151871754 + L1PA3 LINE L1 9 6155 0 24 77 0 0 chr2 101385407 101385459 -151871124 + AT_rich Low_complexity Low_complexity 1 52 0 2270 72 0 10 chr2 101385708 101386001 -151870582 + AluY SINE Alu 9 298 -13 2123 116 7 3 chr2 101387035 101387329 -151869254 + AluSg SINE Alu 1 295 -15 236 294 29 37 chr2 101388339 101388475 -151868108 - MLT1J LTR MaLR -146 365 231 373 313 120 47 chr2 101389533 101389917 -151866666 - MLT1K LTR MaLR -23 565 154 1600 203 112 42 chr2 101390103 101390575 -151866008 + MLT1D LTR MaLR 1 505 0 1307 205 51 13 chr2 101390630 101390711 -151865872 - MER33 DNA MER1_type -2261 324 248 2033 136 10 0 chr2 101390711 101391020 -151865563 + AluSx SINE Alu 1 312 0 1307 205 51 13 chr2 101391020 101391250 -151865333 - MER33 DNA MER1_type -2337 248 1 217 216 54 27 chr2 101392499 101392573 -151864010 - MIR SINE MIR -60 202 127 482 254 79 40 chr2 101392582 101392810 -151863773 - MLT1I LTR MaLR 0 409 173 250 261 152 0 chr2 101394237 101394329 -151862254 + MIR3 SINE MIR 81 186 -22 706 234 96 91 chr2 101394524 101394918 -151861665 + LTR7 LTR ERV1 24 419 -31 982 247 62 41 chr2 101395046 101395435 -151861148 - MLT1I LTR MaLR -12 397 1 411 207 25 50 chr2 101395919 101396040 -151860543 + MIR SINE MIR 48 165 -97 342 324 17 45 chr2 101397754 101397933 -151858650 + L1ME LINE L1 5571 5746 -375 223 333 33 8 chr2 101398067 101398187 -151858396 - L2 LINE L2 0 3272 3150 201 317 10 48 chr2 101399280 101399384 -151857199 + MIR SINE MIR 113 212 -50 292 194 31 82 chr2 101399466 101399564 -151857019 - MIR SINE MIR -123 139 47 476 200 9 0 chr2 101401263 101401373 -151855210 + (TCCA)n Simple_repeat Simple_repeat 1 111 0 1146 153 5 0 chr2 101401385 101401825 -151854758 + (TCCA)n Simple_repeat Simple_repeat 1 442 0 346 260 49 32 chr2 101401866 101401989 -151854594 + L2 LINE L2 3187 3311 -2 192 368 39 26 chr2 101402059 101402214 -151854369 - MIR3 SINE MIR -44 164 8 359 222 30 20 chr2 101402581 101402680 -151853903 + MIR SINE MIR 25 124 -84 199 354 49 0 chr2 101402717 101402799 -151853784 - MER5A DNA MER1_type -50 139 54 305 303 149 31 chr2 101403197 101403392 -151853191 + MIR SINE MIR 8 225 -37 312 80 80 0 chr2 101403748 101403798 -151852785 - MSTB LTR MaLR -372 54 1 326 270 82 106 chr2 101403927 101404294 -151852289 + L2 LINE L2 2914 3271 -1 1243 124 21 11 chr2 101406604 101406790 -151849793 - AluSq SINE Alu -20 293 106 302 298 153 8 chr2 101406959 101407083 -151849500 + HAL1 LINE L1 1596 1737 -770 208 304 108 31 chr2 101408563 101408757 -151847826 - MIR SINE MIR -18 244 36 3314 191 24 31 chr2 101409167 101409787 -151846796 - L1MC1 LINE L1 -460 5873 5250 2070 112 0 46 chr2 101409787 101410092 -151846491 + AluSx SINE Alu 1 291 -21 3314 191 24 31 chr2 101410092 101410988 -151845595 - L1MC1 LINE L1 -1083 5250 4375 6551 116 12 4 chr2 101411068 101412239 -151844344 - L1MA2 LINE L1 -23 6281 5101 1693 186 4 0 chr2 101412258 101412537 -151844046 + AluSx SINE Alu 1 280 -32 441 36 0 0 chr2 101412542 101412597 -151843986 + (GGAA)n Simple_repeat Simple_repeat 2 56 0 253 231 15 15 chr2 101413848 101413913 -151842670 + GA-rich Low_complexity Low_complexity 2 66 0 35 0 0 0 chr2 101416146 101416181 -151840402 + AT_rich Low_complexity Low_complexity 1 35 0 215 143 0 54 chr2 101416738 101416794 -151839789 + (TAAAAA)n Simple_repeat Simple_repeat 6 58 0 25 0 0 0 chr2 101416949 101416974 -151839609 + AT_rich Low_complexity Low_complexity 1 25 0 25 31 0 0 chr2 101417065 101417097 -151839486 + AT_rich Low_complexity Low_complexity 1 32 0 1050 249 75 61 chr2 101417316 101417757 -151838826 + MLT1C LTR MaLR 17 463 -4 690 167 40 24 chr2 101417860 101417986 -151838597 + FLAM_C SINE Alu 1 128 -5 1656 153 35 31 chr2 101418037 101418325 -151838258 + AluJo SINE Alu 1 289 -23 41 66 0 0 chr2 101418529 101418605 -151837978 + AT_rich Low_complexity Low_complexity 1 76 0 395 221 35 18 chr2 101418651 101418764 -151837819 + HAL1 LINE L1 1009 1123 -1384 1944 135 4 0 chr2 101419320 101419642 -151836941 - AluSx SINE Alu 0 323 1 415 216 0 0 chr2 101420112 101420209 -151836374 - L1MA6 LINE L1 0 6300 6204 27 73 0 0 chr2 101420362 101420417 -151836166 + AT_rich Low_complexity Low_complexity 1 55 0 21 71 0 0 chr2 101420504 101420546 -151836037 + AT_rich Low_complexity Low_complexity 1 42 0 315 297 42 18 chr2 101420633 101420798 -151835785 + L1MC4a LINE L1 5699 5867 -1941 2179 111 0 0 chr2 101420801 101421089 -151835494 - AluSx SINE Alu -24 288 1 343 189 112 7 chr2 101421171 101421348 -151835235 + MER20 DNA MER1_type 1 219 0 348 177 62 62 chr2 101421884 101421997 -151834586 + MER103 DNA DNA 8 120 -46 23 0 0 0 chr2 101422367 101422390 -151834193 + AT_rich Low_complexity Low_complexity 1 23 0 244 288 34 0 chr2 101422599 101422658 -151833925 - L2 LINE L2 -21 3251 3191 302 235 153 0 chr2 101424620 101424705 -151831878 + MER5A DNA MER1_type 9 106 -83 22 35 0 0 chr2 101426156 101426185 -151830398 + AT_rich Low_complexity Low_complexity 1 29 0 243 61 0 0 chr2 101427570 101427603 -151828980 + (CA)n Simple_repeat Simple_repeat 2 34 0 23 0 0 0 chr2 101428297 101428320 -151828263 + AT_rich Low_complexity Low_complexity 1 23 0 6741 97 18 1 chr2 101428496 101429536 -151827047 - L1P3 LINE L1 -973 5173 4116 2947 76 0 0 chr2 101429530 101430000 -151826583 + L1P3 LINE L1 5182 5651 -503 * 234 0 0 0 chr2 101430003 101430029 -151826554 + (TG)n Simple_repeat Simple_repeat 2 27 0 636 197 8 25 chr2 101430041 101430163 -151826420 + FLAM_A SINE Alu 6 125 -17 1996 135 3 26 chr2 101430170 101430473 -151826110 + AluSx SINE Alu 1 296 -16 2999 178 116 77 chr2 101430902 101431729 -151824854 - MER21B LTR ERV1 -4 859 1 2778 223 44 9 chr2 101431732 101432395 -151824188 + MER44D DNA MER2_type 20 705 0 22 0 0 0 chr2 101432846 101432868 -151823715 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr2 101432932 101432952 -151823631 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1577 221 51 2 chr2 101433456 101433867 -151822716 + L1MC1 LINE L1 5892 6322 -11 2380 218 36 14 chr2 101434447 101434997 -151821586 + MER68 LTR ERV1 1 562 0 826 228 25 0 chr2 101435336 101435494 -151821089 + FAM SINE Alu 1 162 -13 2107 114 0 3 chr2 101435504 101435793 -151820790 + AluSc SINE Alu 1 288 -21 1531 213 0 30 chr2 101436135 101436435 -151820148 + AluJo SINE Alu 7 297 -15 35 24 0 0 chr2 101436569 101436611 -151819972 + AT_rich Low_complexity Low_complexity 1 42 0 3420 43 16 2 chr2 101437058 101437497 -151819086 - L1PA4 LINE L1 -1 6154 5710 7527 26 1 0 chr2 101437497 101438734 -151817849 + L1PA4 LINE L1 4461 5698 -457 280 308 139 59 chr2 101439125 101439498 -151817085 + L2 LINE L2 1858 2260 -1054 193 361 21 10 chr2 101439590 101439687 -151816896 + L2 LINE L2 2430 2527 -787 24 32 0 0 chr2 101439799 101439830 -151816753 + AT_rich Low_complexity Low_complexity 1 31 0 390 169 7 29 chr2 101439995 101440128 -151816455 + Tigger2 DNA MER2_type 2497 2718 0 22 0 0 0 chr2 101440302 101440324 -151816259 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr2 101440591 101440621 -151815962 + AT_rich Low_complexity Low_complexity 1 30 0 27 49 0 0 chr2 101441199 101441240 -151815343 + AT_rich Low_complexity Low_complexity 1 41 0 417 102 0 0 chr2 101441701 101441760 -151814823 - U6 snRNA snRNA -48 59 1 306 55 91 18 chr2 101443728 101443838 -151812745 + (TA)n Simple_repeat Simple_repeat 2 119 0 457 276 106 20 chr2 101443934 101444133 -151812450 - MIR SINE MIR -25 237 22 201 313 100 25 chr2 101445004 101445084 -151811499 + L2 LINE L2 3139 3224 -48 2159 84 0 21 chr2 101445931 101446246 -151810337 - AluY SINE Alu 0 309 1 335 271 109 10 chr2 101446532 101446724 -151809859 - MER102a DNA MER1_type 0 330 120 31 0 0 0 chr2 101447066 101447097 -151809486 + AT_rich Low_complexity Low_complexity 1 31 0 224 59 29 0 chr2 101447762 101447796 -151808787 + (TTG)n Simple_repeat Simple_repeat 2 36 0 540 287 96 39 chr2 101449701 101449931 -151806652 + MIR SINE MIR 20 262 0 21 0 0 0 chr2 101450854 101450875 -151805708 + AT_rich Low_complexity Low_complexity 1 21 0 2109 111 7 3 chr2 101451030 101451336 -151805247 + AluSx SINE Alu 1 307 -5 27 29 0 0 chr2 101451675 101451709 -151804874 + AT_rich Low_complexity Low_complexity 1 34 0 273 301 30 8 chr2 101451780 101451913 -151804670 - L1ME LINE L1 -460 5661 5526 285 271 0 40 chr2 101452496 101452673 -151803910 + CT-rich Low_complexity Low_complexity 1 170 0 359 199 5 99 chr2 101453535 101453771 -151802812 + C-rich Low_complexity Low_complexity 1 213 0 235 250 0 0 chr2 101455214 101455258 -151801325 + MIR3 SINE MIR 142 185 -23 2085 100 7 3 chr2 101456162 101456462 -151800121 - AluSg SINE Alu -9 301 1 259 331 157 16 chr2 101456498 101456746 -151799837 - L3 LINE CR1 -125 1452 1170 196 271 31 62 chr2 101456725 101456821 -151799762 - L2 LINE L2 0 3272 3180 * 196 377 107 0 chr2 101456889 101457011 -151799572 - L2 LINE L2 -190 3082 2948 375 245 82 82 chr2 101457082 101457229 -151799354 + L2 LINE L2 3125 3271 -1 1384 152 40 119 chr2 101457578 101457973 -151798610 + MLT1A1 LTR MaLR 1 364 -1 2564 202 20 65 chr2 101458974 101459617 -151796966 - MER90 LTR ERV1 0 614 1 355 304 20 19 chr2 101459756 101460032 -151796551 + L1MB7 LINE L1 5152 5427 -745 806 263 16 9 chr2 101460034 101460368 -151796215 - L1MDa LINE L1 -3666 2874 2541 242 218 0 0 chr2 101460342 101460397 -151796186 - L1PA16 LINE L1 0 6560 6506 * 38693 83 9 13 chr2 101460411 101466573 -151790010 - L1PA5 LINE L1 -7 6147 11 251 290 161 0 chr2 101466868 101467023 -151789560 + L1P5 LINE L1 5265 5444 -712 4093 191 32 6 chr2 101467025 101467845 -151788738 + L1MB3 LINE L1 5336 6176 -7 1477 216 256 19 chr2 101467872 101468399 -151788184 + MLT1E1 LTR MaLR 3 654 0 909 168 25 0 chr2 101468441 101468602 -151787981 + FRAM SINE Alu 1 165 -1 327 297 74 64 chr2 101468642 101468987 -151787596 + L1MB7 LINE L1 5533 5895 -269 367 301 81 12 chr2 101469504 101469677 -151786906 - MLT1K LTR MaLR -214 374 190 1408 256 59 16 chr2 101470633 101471071 -151785512 - MLT1L LTR MaLR -7 608 152 296 157 0 0 chr2 101471190 101471241 -151785342 + MLT1L LTR MaLR 344 394 -221 1019 110 0 0 chr2 101471434 101471579 -151785004 - AluSx SINE Alu -37 275 131 357 68 0 0 chr2 101471640 101471684 -151784899 - AluSx SINE Alu -176 126 83 1300 133 0 14 chr2 101471686 101471904 -151784679 - AluJo SINE Alu -97 215 1 255 297 62 55 chr2 101472282 101472427 -151784156 + MER5B DNA MER1_type 1 146 -32 262 269 46 28 chr2 101474440 101474548 -151782035 - MLT1J LTR MaLR 0 511 402 1791 76 0 8 chr2 101476685 101476921 -151779662 + AluSg/x SINE Alu 79 312 0 1371 168 20 62 chr2 101476934 101477238 -151779345 + AluJo SINE Alu 1 291 -21 241 219 110 85 chr2 101477252 101477334 -151779249 - MER5B DNA MER1_type -67 111 28 189 235 0 20 chr2 101477347 101477398 -151779185 - MIR3 SINE MIR -46 162 113 3841 255 115 59 chr2 101477399 101478388 -151778195 + L1M3 LINE L1 30 961 -5421 2218 86 0 0 chr2 101478388 101478680 -151777903 + AluY SINE Alu 13 304 -7 3841 255 115 59 chr2 101478680 101479145 -151777438 + L1M3 LINE L1 961 1398 -4984 1714 174 0 28 chr2 101479145 101479466 -151777117 + AluJb SINE Alu 1 312 0 3841 255 115 59 chr2 101479466 101480017 -151776566 + L1M3 LINE L1 1398 1916 -4466 2233 97 16 0 chr2 101480017 101480325 -151776258 + AluSq SINE Alu 1 313 0 3841 255 115 59 chr2 101480325 101480475 -151776108 + L1M3 LINE L1 1916 2056 -4326 2101 128 3 0 chr2 101480475 101480780 -151775803 + AluSx SINE Alu 1 306 -6 3841 255 115 59 chr2 101480780 101481100 -151775483 + L1M3 LINE L1 2056 2824 -3558 2442 59 0 0 chr2 101481102 101481406 -151775177 + AluY SINE Alu 1 304 -7 1301 87 0 5 chr2 101481409 101481594 -151774989 + AluSc SINE Alu 126 309 0 7656 237 32 28 chr2 101481615 101482049 -151774534 + L1M3 LINE L1 2832 3263 -3119 2231 55 4 0 chr2 101482049 101482324 -151774259 + AluY SINE Alu 16 291 -20 7656 237 32 28 chr2 101482324 101483534 -151773049 + L1M3 LINE L1 3263 4467 -1915 345 24 0 0 chr2 101483534 101483576 -151773007 + (CA)n Simple_repeat Simple_repeat 1 42 0 7656 237 32 28 chr2 101483576 101483876 -151772707 + L1M3 LINE L1 4467 4764 -1618 781 156 7 22 chr2 101483876 101484011 -151772572 + FLAM_C SINE Alu 1 133 0 7656 237 32 28 chr2 101484011 101484310 -151772273 + L1M3 LINE L1 4764 5086 -1296 1224 79 0 45 chr2 101484311 101484489 -151772094 - AluY SINE Alu -9 302 133 2528 53 0 0 chr2 101484489 101484792 -151771791 - AluY SINE Alu -8 303 1 2101 194 34 44 chr2 101484793 101485376 -151771207 + L1M3 LINE L1 5083 5670 -746 2415 81 0 0 chr2 101485376 101485686 -151770897 - AluY SINE Alu -1 310 1 2101 194 34 44 chr2 101485686 101485711 -151770872 + L1M3 LINE L1 5670 5694 -722 2304 92 0 0 chr2 101485711 101486016 -151770567 - AluY SINE Alu 0 311 7 2145 114 0 0 chr2 101486021 101486320 -151770263 - AluSx SINE Alu -13 299 1 2101 194 34 44 chr2 101486320 101486425 -151770158 + L1M3 LINE L1 5698 5803 -613 1848 199 7 77 chr2 101486429 101486847 -151769736 - MSTD LTR MaLR -7 389 1 2122 103 3 3 chr2 101486875 101487175 -151769408 - AluSg SINE Alu -10 300 1 1441 161 4 12 chr2 101487210 101487452 -151769131 + AluSx SINE Alu 20 259 -53 499 145 8 89 chr2 101487452 101487540 -151769043 + L1MB4 LINE L1 6053 6130 -50 1827 158 0 7 chr2 101487540 101487832 -151768751 + AluJo SINE Alu 1 290 -22 499 145 8 89 chr2 101487832 101487867 -151768716 + L1MB4 LINE L1 6130 6166 -14 180 0 0 0 chr2 101487867 101487887 -151768696 + (CCA)n Simple_repeat Simple_repeat 3 22 0 2117 95 6 25 chr2 101490303 101490620 -151765963 + AluSx SINE Alu 1 311 -1 2212 100 0 3 chr2 101490832 101491141 -151765442 - AluY SINE Alu -3 308 1 2314 91 3 0 chr2 101491230 101491537 -151765046 - AluSg SINE Alu -2 308 1 957 43 0 0 chr2 101492229 101492344 -151764239 + AluSp/q SINE Alu 166 280 -33 260 62 0 0 chr2 101492344 101492376 -151764207 - Alu SINE Alu -267 35 4 483 265 83 49 chr2 101492422 101492833 -151763750 - L1M4 LINE L1 -1442 4704 4280 2238 107 3 0 chr2 101492857 101493167 -151763416 - AluSx SINE Alu -1 311 1 248 261 45 68 chr2 101493167 101493332 -151763251 - L1M4 LINE L1 -1948 4198 4036 203 256 0 0 chr2 101493389 101493432 -151763151 + (CATA)n Simple_repeat Simple_repeat 3 45 0 2821 163 8 0 chr2 101493478 101493950 -151762633 - L1MB2 LINE L1 -208 5963 5488 404 264 8 23 chr2 101493977 101494106 -151762477 - L1M4 LINE L1 -2233 3913 3787 277 155 0 0 chr2 101494279 101494337 -151762246 + MER115 DNA AcHobo 602 659 -34 3660 154 31 22 chr2 101494343 101494690 -151761893 - L1MB3 LINE L1 -2 6181 5824 2130 73 15 64 chr2 101494690 101495017 -151761566 - AluY SINE Alu 0 311 1 3660 154 31 22 chr2 101495017 101495346 -151761237 - L1MB3 LINE L1 -359 5824 5499 2115 206 8 16 chr2 101495346 101495865 -151760718 - L1MB2 LINE L1 -748 5398 4904 1059 134 0 0 chr2 101496217 101496366 -151760217 - AluSg/x SINE Alu -27 285 137 392 113 0 0 chr2 101496385 101496438 -151760145 - MLT1F LTR MaLR -106 436 384 218 303 123 25 chr2 101496450 101496572 -151760011 - L2 LINE L2 0 3272 3139 2163 99 16 0 chr2 101496905 101497209 -151759374 + AluSx SINE Alu 1 309 -3 1274 161 0 32 chr2 101498164 101498412 -151758171 - AluJo SINE Alu 0 312 73 294 287 147 52 chr2 101498529 101498801 -151757782 - L3 LINE CR1 -106 1471 1174 225 208 56 83 chr2 101499002 101499067 -151757516 - MIR SINE MIR -87 175 113 854 204 21 11 chr2 101499067 101499253 -151757330 + MER5A DNA MER1_type 2 189 0 1990 87 0 31 chr2 101499764 101500050 -151756533 + AluSq SINE Alu 1 277 -36 183 42 0 0 chr2 101500054 101500078 -151756505 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 2528 39 0 26 chr2 101501174 101501481 -151755102 - AluY SINE Alu -12 299 1 185 319 65 36 chr2 101503513 101503651 -151752932 - L2 LINE L2 -2 3270 3129 2408 85 0 0 chr2 101503796 101504091 -151752492 - AluSx SINE Alu -17 295 1 586 284 77 10 chr2 101504122 101504330 -151752253 - ERVL-F LTR ERVL -5371 393 172 270 157 0 57 chr2 101504402 101504472 -151752111 - MLT2F LTR ERVL 0 663 598 5399 104 25 13 chr2 101504476 101505303 -151751280 - L1MA3 LINE L1 -1 6304 5468 625 192 48 20 chr2 101505308 101505454 -151751129 + MLT1C LTR MaLR 318 467 0 2769 156 36 41 chr2 101506072 101506100 -151750483 + MER6A DNA MER2_type 1 28 -837 2663 58 0 0 chr2 101506100 101506408 -151750175 - AluY SINE Alu -3 308 1 1077 153 0 0 chr2 101506413 101506576 -151750007 - FRAM SINE Alu 0 166 4 2769 156 36 41 chr2 101506576 101507149 -151749434 + MER6A DNA MER2_type 32 605 0 238 395 0 0 chr2 101507340 101507517 -151749066 + G-rich Low_complexity Low_complexity 3 179 0 * 281 320 17 23 chr2 101507409 101507665 -151748918 + GA-rich Low_complexity Low_complexity 1 254 0 275 224 17 0 chr2 101508350 101508408 -151748175 - L2 LINE L2 -1 3271 3213 420 216 81 81 chr2 101508866 101509051 -151747532 + MIR SINE MIR 6 190 -72 463 250 150 14 chr2 101509202 101509422 -151747161 + MLT1K LTR MaLR 144 393 -195 330 263 111 10 chr2 101509483 101509582 -151747001 - L2 LINE L2 -1 3312 3204 921 243 70 94 chr2 101509602 101509680 -151746903 + L2 LINE L2 2952 3030 -283 2623 47 7 0 chr2 101509680 101509979 -151746604 - AluY SINE Alu 0 311 11 921 243 70 94 chr2 101509979 101510271 -151746312 + L2 LINE L2 3030 3313 0 562 233 47 8 chr2 101510610 101510739 -151745844 - MIR SINE MIR -70 192 59 2479 54 7 0 chr2 101510777 101511075 -151745508 + AluY SINE Alu 1 300 -11 286 284 29 20 chr2 101511299 101511401 -151745182 - L2 LINE L2 -205 3067 2965 309 245 408 0 chr2 101511898 101512045 -151744538 + MIR SINE MIR 34 240 -22 3936 98 33 6 chr2 101512395 101512944 -151743639 - LTR6A LTR ERV1 0 564 1 281 183 40 0 chr2 101514922 101515000 -151741583 + MIR SINE MIR 61 143 -65 424 226 38 0 chr2 101515323 101515429 -151741154 + MIR SINE MIR 12 121 -141 419 231 62 56 chr2 101515651 101515811 -151740772 + MER20 DNA MER1_type 1 161 -58 243 303 45 0 chr2 101515866 101515955 -151740628 - MIR SINE MIR -55 153 61 533 272 70 33 chr2 101516087 101516300 -151740283 + MIR SINE MIR 13 233 -29 254 283 73 66 chr2 101516348 101516620 -151739963 - L2 LINE L2 -60 3212 2939 1090 199 147 49 chr2 101516776 101517276 -151739307 - L2 LINE L2 -22 3291 2716 1431 270 85 16 chr2 101520152 101520644 -151735939 - L1ME1 LINE L1 -9 6157 5632 2010 82 60 8 chr2 101520657 101520955 -151735628 - AluSq SINE Alu 0 312 1 968 126 7 0 chr2 101520957 101521092 -151735491 - AluSq/x SINE Alu -177 136 1 2262 185 95 42 chr2 101521674 101521851 -151734732 - MER82 DNA MER2_type -20 633 467 2138 100 3 59 chr2 101521851 101522171 -151734412 - AluY SINE Alu -9 302 1 2262 185 95 42 chr2 101522171 101522206 -151734377 - MER82 DNA MER2_type -186 467 435 2129 98 13 32 chr2 101522206 101522522 -151734061 - AluSg SINE Alu 0 310 1 2044 128 3 3 chr2 101522524 101522820 -151733763 - AluSq SINE Alu -17 296 1 2262 185 95 42 chr2 101522820 101523204 -151733379 - MER82 DNA MER2_type -218 435 1 390 234 51 7 chr2 101523370 101523507 -151733076 - L1ME2 LINE L1 0 6164 6022 586 292 114 42 chr2 101523815 101524147 -151732436 + L2 LINE L2 2925 3280 -33 277 266 47 47 chr2 101525855 101525983 -151730600 + MIR SINE MIR 3 130 -132 1413 237 139 5 chr2 101525983 101526459 -151730124 - L2 LINE L2 -2 3311 2730 297 303 42 25 chr2 101526475 101526594 -151729989 + MIR SINE MIR 141 261 -1 190 379 0 0 chr2 101526949 101527015 -151729568 + L3 LINE CR1 1409 1474 -103 360 310 78 32 chr2 101527151 101527429 -151729154 + L1MEd LINE L1 1072 1412 -4865 710 291 71 11 chr2 101527431 101527813 -151728770 + L1M4 LINE L1 4757 5161 -985 458 236 82 126 chr2 101528010 101528449 -151728134 + L1M4 LINE L1 3972 4370 -1776 1987 163 3 0 chr2 101528449 101528755 -151727828 - AluJo SINE Alu -5 307 1 458 236 82 126 chr2 101528755 101529023 -151727560 + L1M4 LINE L1 4370 4648 -1498 185 119 24 0 chr2 101529163 101529205 -151727378 + GA-rich Low_complexity Low_complexity 2 44 0 1958 233 94 34 chr2 101529261 101530157 -151726426 - SST1 Satellite centromeric -27 1536 587 549 321 36 11 chr2 101530289 101530566 -151726017 - HAL1 LINE L1 -969 1538 1255 518 308 35 48 chr2 101530557 101530623 -151725960 - L1MC4 LINE L1 -2 8040 7975 * 2023 190 0 14 chr2 101530623 101530991 -151725592 - MLT1A1 LTR MaLR -2 363 1 518 308 35 48 chr2 101530991 101531404 -151725179 - L1MC4 LINE L1 -67 7975 7567 305 154 0 0 chr2 101531406 101531458 -151725125 - AluSp/q SINE Alu -5 298 247 203 245 38 0 chr2 101531568 101531621 -151724962 + T-rich Low_complexity Low_complexity 2 56 0 928 151 224 0 chr2 101532042 101532234 -151724349 - MER46A DNA MER2_type -1 235 1 505 295 40 44 chr2 101532337 101532564 -151724019 - L1M4 LINE L1 -2993 3153 2928 884 183 75 21 chr2 101532595 101532781 -151723802 - AluJo SINE Alu -20 292 97 565 271 127 0 chr2 101533123 101533304 -151723279 + MIR SINE MIR 49 252 -10 2596 63 0 0 chr2 101533469 101533770 -151722813 + AluY SINE Alu 1 301 -10 1039 191 19 9 chr2 101534114 101534324 -151722259 - AluJo SINE Alu -16 296 85 492 295 141 46 chr2 101534821 101535190 -151721393 - L1M4 LINE L1 -1446 5402 4999 22 0 0 0 chr2 101535577 101535599 -151720984 + AT_rich Low_complexity Low_complexity 1 22 0 403 242 10 40 chr2 101535633 101535648 -151720935 - L1MC4 LINE L1 -1334 6708 6694 1986 157 0 10 chr2 101535648 101535948 -151720635 + AluSx SINE Alu 1 297 -15 403 242 10 40 chr2 101535948 101536031 -151720552 - L1MC4 LINE L1 -1348 6694 6613 301 241 9 19 chr2 101536059 101536167 -151720416 + L1M4 LINE L1 4587 4693 -1453 2287 109 3 0 chr2 101536361 101536664 -151719919 + AluSx SINE Alu 1 304 -8 352 275 79 51 chr2 101536688 101536866 -151719717 - HAL1 LINE L1 -81 2426 2244 1884 110 103 0 chr2 101537179 101537451 -151719132 - AluSq SINE Alu -13 300 1 2127 153 12 0 chr2 101538691 101539030 -151717553 - MER2 DNA MER2_type -1 343 1 5803 160 54 28 chr2 101539451 101540985 -151715598 - L1M4 LINE L1 -3768 3080 1506 1176 194 103 79 chr2 101541086 101541628 -151714955 - L1M4 LINE L1 -955 5191 4637 2520 76 0 0 chr2 101541628 101541932 -151714651 + AluSq SINE Alu 1 304 -9 1173 266 10 16 chr2 101544043 101544427 -151712156 - SST1 Satellite centromeric -917 646 265 276 231 56 65 chr2 101544513 101544621 -151711962 + SST1 Satellite centromeric 684 790 -773 578 285 48 48 chr2 101544947 101545344 -151711239 + SST1 Satellite centromeric 1140 1536 -27 207 203 0 17 chr2 101545349 101545408 -151711175 + (TG)n Simple_repeat Simple_repeat 1 58 0 1869 196 62 22 chr2 101545826 101546275 -151710308 + MLT1C LTR MaLR 1 467 0 21 0 0 0 chr2 101546322 101546343 -151710240 + AT_rich Low_complexity Low_complexity 1 21 0 296 277 80 9 chr2 101547292 101547505 -151709078 - L1M4 LINE L1 -3405 2741 2514 22 35 0 0 chr2 101547538 101547567 -151709016 + AT_rich Low_complexity Low_complexity 1 29 0 239 264 19 28 chr2 101547582 101547688 -151708895 - L1M4 LINE L1 -3862 2284 2180 2367 88 0 3 chr2 101547689 101547995 -151708588 - AluY SINE Alu -3 308 4 926 104 15 0 chr2 101548007 101548141 -151708442 - AluSq/x SINE Alu -176 136 1 2448 165 64 2 chr2 101548145 101548648 -151707935 - L1MC3 LINE L1 -316 7469 6936 261 119 0 0 chr2 101548853 101548895 -151707688 + (T)n Simple_repeat Simple_repeat 1 42 0 190 247 311 47 chr2 101550064 101550299 -151706284 + L2 LINE L2 2443 2739 -575 779 198 17 0 chr2 101552530 101552702 -151703881 + L1 LINE L1 2344 2518 -3628 2175 112 3 40 chr2 101552702 101552847 -151703736 + AluSx SINE Alu 1 150 -162 2370 89 13 0 chr2 101552847 101553151 -151703432 + AluY SINE Alu 1 308 -3 2175 112 3 40 chr2 101553151 101553328 -151703255 + AluSx SINE Alu 150 311 -1 805 251 14 9 chr2 101553328 101553539 -151703044 + L1MC4a LINE L1 6341 6552 -1256 750 184 29 46 chr2 101553524 101553698 -151702885 + L1MC4 LINE L1 6755 6925 -1117 * 3184 185 52 47 chr2 101553798 101554260 -151702323 - L1MB8 LINE L1 -129 6049 5591 1981 134 3 13 chr2 101554260 101554559 -151702024 + AluSq SINE Alu 1 296 -17 3184 185 52 47 chr2 101554559 101555270 -151701313 - L1MB8 LINE L1 -587 5591 4867 4687 240 61 22 chr2 101555526 101557074 -151699509 + L1M4 LINE L1 2387 3995 -2151 5596 201 27 0 chr2 101557501 101558696 -151697887 + L1 LINE L1 3028 4254 -1892 2246 113 7 7 chr2 101558698 101559007 -151697576 + AluSx SINE Alu 1 309 -3 2163 237 26 8 chr2 101559072 101559680 -151696903 + L1M4 LINE L1 3364 3982 -2164 1188 175 4 30 chr2 101559785 101560048 -151696535 + L1MC3 LINE L1 7524 7779 -6 22 56 0 0 chr2 101560566 101560602 -151695981 + AT_rich Low_complexity Low_complexity 1 36 0 395 193 0 64 chr2 101561075 101561184 -151695399 - L1PB4 LINE L1 0 6156 6055 710 169 7 28 chr2 101561547 101561689 -151694894 - MER74B LTR ERVL -481 141 3 293 230 57 11 chr2 101561720 101561807 -151694776 - L1MC/D LINE L1 -2211 5574 5488 2403 69 3 0 chr2 101561836 101562127 -151694456 - AluY SINE Alu -19 292 1 2369 54 3 24 chr2 101562127 101562424 -151694159 - AluY SINE Alu -20 291 1 2322 102 10 0 chr2 101562424 101562728 -151693855 - AluSp SINE Alu -6 307 1 1317 143 51 0 chr2 101563409 101563625 -151692958 - Tigger2a DNA MER2_type -207 227 1 21 0 0 0 chr2 101563625 101563646 -151692937 + AT_rich Low_complexity Low_complexity 1 21 0 396 0 0 0 chr2 101563646 101563690 -151692893 + (CA)n Simple_repeat Simple_repeat 2 45 0 232 226 154 54 chr2 101563794 101564015 -151692568 + L1MC4a LINE L1 6092 6334 -1474 963 140 5 122 chr2 101564145 101564359 -151692224 + MER20 DNA MER1_type 26 214 -5 2491 93 0 0 chr2 101564473 101564785 -151691798 - AluSp SINE Alu -1 312 1 23 54 0 0 chr2 101564795 101564832 -151691751 + AT_rich Low_complexity Low_complexity 1 37 0 1296 218 46 26 chr2 101564841 101565148 -151691435 - L1ME LINE L1 -407 5763 5451 237 312 0 32 chr2 101565311 101565404 -151691179 + G-rich Low_complexity Low_complexity 2 91 0 1427 178 16 29 chr2 101565887 101566202 -151690381 - AluSx SINE Alu -1 311 1 1544 176 0 8 chr2 101566687 101566943 -151689640 + AluSq SINE Alu 5 258 -55 2222 116 3 0 chr2 101567202 101567503 -151689080 + AluSx SINE Alu 1 302 -10 1609 129 0 5 chr2 101567503 101567727 -151688856 + AluSc SINE Alu 1 223 -86 24 0 0 0 chr2 101567793 101567817 -151688766 + AT_rich Low_complexity Low_complexity 1 24 0 1884 128 0 64 chr2 101567824 101568137 -151688446 + AluSg SINE Alu 1 293 -17 969 242 87 87 chr2 101568377 101568862 -151687721 + MER21B LTR ERV1 210 804 -127 460 194 32 0 chr2 101568866 101568959 -151687624 + L1M4 LINE L1 4500 4595 -1551 327 212 15 0 chr2 101569080 101569146 -151687437 + MER5B DNA MER1_type 58 124 -54 2120 118 10 13 chr2 101569171 101569477 -151687106 + AluSq SINE Alu 1 305 -8 2256 81 0 7 chr2 101569650 101569946 -151686637 + AluSx SINE Alu 9 302 -10 24 77 0 0 chr2 101569947 101569999 -151686584 + AT_rich Low_complexity Low_complexity 1 52 0 2052 94 0 0 chr2 101570385 101570640 -151685943 - AluSg SINE Alu -14 296 42 2213 81 0 7 chr2 101570640 101570913 -151685670 - AluSg SINE Alu -16 294 24 954 273 110 5 chr2 101571866 101572276 -151684307 - L1ME LINE L1 -1108 5038 4586 244 139 0 0 chr2 101572315 101572351 -151684232 - U2 snRNA snRNA -152 36 1 195 188 0 0 chr2 101572587 101572635 -151683948 + CT-rich Low_complexity Low_complexity 2 49 0 2143 122 10 3 chr2 101573167 101573478 -151683105 - AluSq SINE Alu 0 313 1 899 164 32 48 chr2 101573948 101574137 -151682446 + AluSg/x SINE Alu 124 309 -1 246 200 0 0 chr2 101574437 101574482 -151682101 + MER5B DNA MER1_type 1 45 -133 2212 105 3 10 chr2 101574482 101574788 -151681795 - AluSx SINE Alu -1 311 8 6545 202 34 6 chr2 101574794 101576278 -151680305 + L1 LINE L1 2350 3875 -2271 372 141 39 26 chr2 101576295 101576373 -151680210 + AluSx SINE Alu 16 94 -208 566 200 9 0 chr2 101576518 101576623 -151679960 + AluSg/x SINE Alu 191 296 -16 734 310 163 14 chr2 101576670 101577038 -151679545 - LTR16A LTR ERVL 0 450 28 611 241 49 71 chr2 101577022 101577246 -151679337 + LTR16A1 LTR ERVL 226 444 -13 * 237 316 142 14 chr2 101577284 101577496 -151679087 + L2 LINE L2 2360 2598 -716 212 0 36 0 chr2 101577953 101577981 -151678602 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1509 125 0 5 chr2 101578126 101578342 -151678241 + AluSx SINE Alu 80 294 -16 2092 107 7 30 chr2 101578354 101578652 -151677931 + AluSx SINE Alu 6 296 -16 1977 118 4 4 chr2 101579436 101579752 -151676831 + AluSg SINE Alu 1 316 0 2183 93 7 7 chr2 101580444 101580735 -151675848 - AluY SINE Alu -15 296 6 2232 89 0 4 chr2 101580740 101581021 -151675562 - AluSg SINE Alu -30 280 1 490 239 119 0 chr2 101581381 101581490 -151675093 - FLAM_A SINE Alu -10 123 2 4285 145 44 42 chr2 101581491 101582330 -151674253 - L1MC1 LINE L1 0 6333 5493 711 224 27 27 chr2 101582369 101582552 -151674031 - L1MC1 LINE L1 -1886 4260 4078 227 234 125 0 chr2 101582753 101582817 -151673766 - HAL1 LINE L1 -2385 122 51 491 237 0 10 chr2 101583435 101583532 -151673051 + MER58A DNA MER1_type 2 97 -10 933 173 22 80 chr2 101583537 101583763 -151672820 - MER20 DNA MER1_type -1 218 6 409 206 206 0 chr2 101583768 101583865 -151672718 + MER58A DNA MER1_type 93 209 -15 2281 88 7 3 chr2 101584086 101584382 -151672201 + AluSc SINE Alu 1 297 -12 2229 84 0 11 chr2 101584392 101584706 -151671877 + AluSc SINE Alu 1 311 0 266 255 171 29 chr2 101584787 101585097 -151671486 - HAL1 LINE L1 -191 2316 1963 227 53 0 0 chr2 101585229 101585267 -151671316 - AluSx SINE Alu -3 300 263 1916 127 0 14 chr2 101585373 101585664 -151670919 - AluSx SINE Alu -25 287 1 1992 131 3 0 chr2 101585695 101585977 -151670606 - AluSx SINE Alu -29 283 1 24 0 0 0 chr2 101586566 101586590 -151669993 + AT_rich Low_complexity Low_complexity 1 24 0 253 281 49 0 chr2 101586598 101586680 -151669903 - HsTC2 DNA Tc2 -1811 87 2 459 266 72 53 chr2 101587103 101587315 -151669268 - L1ME3 LINE L1 -233 5929 5708 770 192 0 0 chr2 101587315 101587445 -151669138 - FLAM_A SINE Alu -3 130 1 459 266 72 53 chr2 101587445 101587536 -151669047 - L1ME3 LINE L1 -454 5708 5620 189 0 0 0 chr2 101587547 101587568 -151669015 + (A)n Simple_repeat Simple_repeat 1 21 0 535 157 4 15 chr2 101587676 101587808 -151668775 + AluSx SINE Alu 1 133 -179 183 42 0 0 chr2 101587808 101587832 -151668751 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 535 157 4 15 chr2 101587832 101587937 -151668646 + AluSx SINE Alu 133 306 -6 406 309 97 16 chr2 101587939 101588478 -151668105 - L1ME3 LINE L1 -1158 4988 4406 471 297 88 6 chr2 101588899 101589081 -151667502 + L1MEd LINE L1 463 659 -5460 479 169 0 0 chr2 101589131 101589214 -151667369 + L1MB5 LINE L1 6083 6165 -9 2044 150 0 6 chr2 101589239 101589553 -151667030 + AluSx SINE Alu 1 312 0 391 264 25 41 chr2 101590463 101590584 -151665999 - MLT1H LTR MaLR 0 549 431 331 229 153 69 chr2 101590677 101590821 -151665762 - MLT1H LTR MaLR -264 285 130 214 315 14 0 chr2 101591389 101591462 -151665121 + CT-rich Low_complexity Low_complexity 1 74 0 2250 99 3 3 chr2 101592376 101592669 -151663914 - AluSx SINE Alu -19 293 1 402 311 0 4 chr2 101592840 101592976 -151663607 - MIR SINE MIR -45 163 29 * 571 213 77 49 chr2 101592965 101593148 -151663435 + MIR SINE MIR 30 217 -45 722 246 51 131 chr2 101593480 101593561 -151663022 - MLT1H LTR MaLR 0 549 463 2243 128 0 0 chr2 101593561 101593859 -151662724 + AluSq SINE Alu 1 298 -15 722 246 51 131 chr2 101593859 101594290 -151662293 - MLT1H LTR MaLR -86 463 78 2367 86 0 0 chr2 101594400 101594692 -151661891 + AluY SINE Alu 11 302 -9 264 244 128 0 chr2 101595289 101595375 -151661208 + L2 LINE L2 3216 3312 -1 358 231 0 46 chr2 101595741 101595849 -151660734 + MER91B DNA MER1_type 36 138 -52 192 216 0 0 chr2 101597447 101597484 -151659099 - L2 LINE L2 -13 3300 3264 * 408 309 119 5 chr2 101597451 101597661 -151658922 - MIR SINE MIR -11 251 18 236 277 15 0 chr2 101599152 101599217 -151657366 + MIR SINE MIR 145 210 -52 2319 86 16 3 chr2 101599225 101599529 -151657054 + AluSc SINE Alu 1 308 -1 22 0 0 0 chr2 101599662 101599684 -151656899 + AT_rich Low_complexity Low_complexity 1 22 0 460 209 33 0 chr2 101599684 101599775 -151656808 + MER58C DNA MER1_type 113 206 -9 270 262 206 37 chr2 101599910 101600599 -151655984 - L2 LINE L2 0 3272 2470 226 237 17 0 chr2 101600714 101600773 -151655810 - L2 LINE L2 -1067 2247 2188 * 468 167 83 0 chr2 101600769 101600865 -151655718 + L2 LINE L2 3207 3310 -3 509 273 135 43 chr2 101603717 101604109 -151652474 + MER97b DNA MER1_type? 623 1050 -3 2251 89 67 76 chr2 101604312 101604738 -151651845 - LTR14B LTR ERVK 0 608 1 268 277 21 43 chr2 101605119 101605213 -151651370 - L3 LINE CR1 -114 1463 1372 241 296 114 64 chr2 101605337 101605617 -151650966 - L2 LINE L2 -128 3144 2851 321 222 88 113 chr2 101605728 101605922 -151650661 - L1MC/D LINE L1 -2298 5510 5322 283 240 40 0 chr2 101606230 101606305 -151650278 - MIR SINE MIR -74 188 111 192 313 52 0 chr2 101606644 101606740 -151649843 + MIR SINE MIR 37 137 -71 304 297 26 88 chr2 101606741 101606827 -151649756 - HAL1 LINE L1 -1406 1101 1032 2276 101 0 0 chr2 101606827 101607125 -151649458 - AluSq SINE Alu -15 298 1 304 297 26 88 chr2 101607125 101607230 -151649353 - HAL1 LINE L1 -1475 1032 922 329 244 105 0 chr2 101607561 101607647 -151648936 - MIR SINE MIR -65 143 49 427 282 138 6 chr2 101607870 101608044 -151648539 + MIR SINE MIR 60 256 -6 4239 192 34 33 chr2 101608198 101608514 -151648069 + L1MB4 LINE L1 4860 5174 -1006 2143 115 0 6 chr2 101608514 101608828 -151647755 - AluSx SINE Alu 0 312 1 4239 192 34 33 chr2 101608828 101609831 -151646752 + L1MB4 LINE L1 5174 6174 -6 286 260 27 0 chr2 101609978 101610051 -151646532 - L2 LINE L2 -2951 363 289 698 143 0 9 chr2 101610069 101610181 -151646402 + MLT1A1 LTR MaLR 255 365 0 1159 211 63 30 chr2 101610182 101610665 -151645918 + L1M4 LINE L1 5106 5608 -570 2585 33 0 0 chr2 101611958 101612262 -151644321 - AluY SINE Alu -7 304 1 402 234 90 18 chr2 101613018 101613129 -151643454 - MIR SINE MIR -64 144 26 661 230 31 27 chr2 101613156 101613378 -151643205 - MER90 LTR ERV1 -1 613 391 674 302 73 46 chr2 101614288 101614571 -151642012 - MER110-int LTR ERV1 -2049 2598 2301 1635 185 128 3 chr2 101614571 101614955 -151641628 - MSTB1 LTR MaLR 0 432 1 674 302 73 46 chr2 101614955 101615042 -151641541 - MER110-int LTR ERV1 -2346 2301 2218 2253 161 210 8 chr2 101616005 101616533 -151640050 + LTR24C LTR ERV1 1 635 0 1302 192 7 58 chr2 101616643 101616951 -151639632 + AluJo SINE Alu 3 294 -18 2082 117 0 10 chr2 101617345 101617652 -151638931 - AluSx SINE Alu -8 304 1 988 168 6 0 chr2 101620496 101620663 -151635920 - AluJo SINE Alu -23 289 122 409 258 32 0 chr2 101620670 101620763 -151635820 + MER58A DNA MER1_type 17 112 0 358 177 32 0 chr2 101620772 101620834 -151635749 + MER58A DNA MER1_type 159 222 -2 2177 57 0 0 chr2 101620834 101621098 -151635485 + AluY SINE Alu 35 298 -13 386 169 75 0 chr2 101625658 101625739 -151630844 + AluJ/FLAM SINE Alu 1 71 -231 419 222 120 0 chr2 101628759 101628867 -151627716 + MER63 DNA MER1_type 1 747 -89 28 29 0 0 chr2 101630104 101630139 -151626444 + AT_rich Low_complexity Low_complexity 1 35 0 1976 111 0 37 chr2 101631517 101631815 -151624768 - AluSx SINE Alu -23 289 3 1527 152 3 119 chr2 101631866 101632201 -151624382 - AluJo SINE Alu -5 297 2 1938 131 3 3 chr2 101635691 101635989 -151620594 + AluSx SINE Alu 1 298 -14 243 79 0 26 chr2 101636732 101636770 -151619813 - AluJb SINE Alu -7 295 259 890 119 0 8 chr2 101636770 101636896 -151619687 - AluJb SINE Alu -102 210 86 191 296 0 0 chr2 101636952 101636996 -151619587 + MER5C DNA MER1_type 281 324 0 380 272 53 9 chr2 101637296 101637410 -151619173 + L2 LINE L2 3192 3310 -3 2372 65 0 7 chr2 101639126 101639432 -151617151 - AluY SINE Alu -7 304 1 338 228 12 0 chr2 101639582 101639668 -151616915 - L1ME1 LINE L1 -1 6183 6090 213 271 306 18 chr2 101639846 101640016 -151616567 + MIR SINE MIR 17 235 -27 379 258 41 10 chr2 101640127 101640224 -151616359 - L2 LINE L2 -36 3236 3137 1085 177 56 0 chr2 101640469 101640667 -151615916 + MER58C DNA MER1_type 4 212 -3 371 182 0 30 chr2 101640837 101640895 -151615688 + AluJ/FRAM SINE Alu 228 285 -17 381 43 0 0 chr2 101640895 101640942 -151615641 + (CAAAC)n Simple_repeat Simple_repeat 2 48 0 2216 92 0 0 chr2 101641359 101641643 -151614940 + AluSx SINE Alu 14 297 -15 269 317 50 66 chr2 101641654 101641973 -151614610 + L2 LINE L2 1784 2097 -1217 255 281 82 58 chr2 101642072 101642243 -151614340 - MER5B DNA MER1_type -3 175 1 788 167 56 28 chr2 101642627 101642807 -151613776 + MER5A DNA MER1_type 1 185 -4 1666 175 9 19 chr2 101642811 101643126 -151613457 + AluJo SINE Alu 1 312 0 215 0 67 0 chr2 101643131 101643161 -151613422 + (CAAAAA)n Simple_repeat Simple_repeat 4 35 0 245 228 87 130 chr2 101643361 101643615 -151612968 + L2 LINE L2 2492 2734 -580 274 284 57 0 chr2 101644252 101644340 -151612243 + L2 LINE L2 3158 3250 -22 9365 190 132 30 chr2 101644673 101648182 -151608401 + L1ME3 LINE L1 5 3869 -2671 1682 175 29 21 chr2 101648285 101648722 -151607861 + L1ME3 LINE L1 5576 6017 -619 3727 185 59 45 chr2 101648849 101649767 -151606816 + L1MD1 LINE L1 5304 6234 -8 1238 171 121 46 chr2 101649779 101650059 -151606524 + AluJo SINE Alu 1 301 -1 324 237 161 0 chr2 101651082 101651175 -151605408 + MER46C DNA MER2_type 1 108 -230 314 181 145 0 chr2 101651233 101651316 -151605267 + MER46C DNA MER2_type 243 337 -1 310 304 45 18 chr2 101652963 101653075 -151603508 - MIR SINE MIR -90 172 58 1320 243 99 45 chr2 101654738 101655297 -151601286 + MLT1E LTR MaLR 1 593 0 955 215 78 0 chr2 101655317 101655522 -151601061 - MER58A DNA MER1_type -3 221 1 2258 110 0 0 chr2 101657229 101657530 -151599053 + AluY SINE Alu 1 301 -10 375 281 60 54 chr2 101657538 101657705 -151598878 + MER21B LTR ERV1 485 652 -211 640 270 60 12 chr2 101657811 101658063 -151598520 + L1ME3 LINE L1 6257 6520 -36 242 314 105 52 chr2 101658167 101658320 -151598263 - L2 LINE L2 -1121 2193 2033 787 104 9 0 chr2 101658638 101658753 -151597830 + L1PA7 LINE L1 6034 6149 -5 627 232 125 55 chr2 101658757 101658993 -151597590 + L1M4 LINE L1 4901 5119 -1047 1814 167 3 17 chr2 101658993 101659292 -151597291 + AluJb SINE Alu 1 295 -17 627 232 125 55 chr2 101659292 101659547 -151597036 + L1M4 LINE L1 5119 5428 -738 384 280 37 19 chr2 101659770 101659877 -151596706 + MER5A DNA MER1_type 59 167 -22 2143 287 99 8 chr2 101660375 101661538 -151595045 - L1 LINE L1 -1887 4259 2953 1304 204 38 46 chr2 101661573 101661941 -151594642 + MLT1B LTR MaLR 22 386 -4 818 263 119 7 chr2 101661941 101662510 -151594073 - L1 LINE L1 -3184 2962 2234 1252 223 56 23 chr2 101662558 101662953 -151593630 + L1MC/D LINE L1 5254 5661 -2147 925 121 79 0 chr2 101662974 101663139 -151593444 - L1MA8 LINE L1 -12 6279 6102 1521 179 131 11 chr2 101663140 101663491 -151593092 - MER47B DNA MER2_type -2 416 24 689 187 98 42 chr2 101663496 101663710 -151592873 - L1MA8 LINE L1 -245 6046 5821 17434 106 14 2 chr2 101663970 101666744 -151589839 - L1P LINE L1 -1016 5130 2323 680 238 52 24 chr2 101666812 101667060 -151589523 - L1M4 LINE L1 -1410 4736 4482 448 286 84 43 chr2 101667161 101667309 -151589274 - L1M4 LINE L1 -1639 4507 4367 334 200 67 0 chr2 101667309 101667384 -151589199 + MER116 DNA Mariner 1 80 0 448 286 84 43 chr2 101667384 101667697 -151588886 - L1M4 LINE L1 -1779 4367 4027 639 290 66 18 chr2 101667746 101668069 -151588514 - LTR16B LTR ERVL -2 462 52 391 297 88 21 chr2 101668123 101668153 -151588430 + L1MD2 LINE L1 1688 1715 -4885 2184 122 3 0 chr2 101668153 101668447 -151588136 + AluSq SINE Alu 1 295 -18 391 297 88 21 chr2 101668447 101668804 -151587779 + L1MD2 LINE L1 1715 2138 -4462 667 247 40 36 chr2 101668838 101669224 -151587359 + MLT1G3 LTR MaLR 100 553 -2 589 250 110 11 chr2 101669304 101669398 -151587185 - L1MC5 LINE L1 -385 7576 7493 228 35 0 0 chr2 101669398 101669427 -151587156 + (TTG)n Simple_repeat Simple_repeat 2 30 0 589 250 110 11 chr2 101669427 101669604 -151586979 - L1MC5 LINE L1 -468 7493 7278 440 236 89 100 chr2 101669608 101669779 -151586804 + MER21B LTR ERV1 8 176 -687 2292 107 10 0 chr2 101669779 101670087 -151586496 + AluSx SINE Alu 1 311 -1 440 236 89 100 chr2 101670087 101670195 -151586388 + MER21B LTR ERV1 176 284 -579 1923 92 27 14 chr2 101670231 101670526 -151586057 + THE1C LTR MaLR 77 375 0 823 239 77 10 chr2 101670703 101670912 -151585671 - MER58A DNA MER1_type 0 224 2 420 329 58 7 chr2 101671155 101671310 -151585273 - MIR SINE MIR -95 167 5 1810 145 14 17 chr2 101671808 101672104 -151584479 + AluSx SINE Alu 5 299 -13 421 137 82 109 chr2 101672175 101672358 -151584225 + L1M4 LINE L1 4964 5141 -1005 728 187 0 30 chr2 101672372 101672506 -151584077 + FLAM_C SINE Alu 1 130 -3 378 103 35 46 chr2 101672638 101672725 -151583858 + L1MB7 LINE L1 6081 6166 -18 359 200 32 48 chr2 101672918 101673043 -151583540 + L1MC4 LINE L1 7914 8036 -6 2301 258 68 24 chr2 101673498 101674563 -151582020 + L1MD2 LINE L1 3506 4617 -1923 366 294 130 43 chr2 101674682 101675005 -151581578 + L1MD2 LINE L1 6164 6514 -239 342 0 0 0 chr2 101675024 101675062 -151581521 + (A)n Simple_repeat Simple_repeat 1 38 0 1329 249 69 22 chr2 101675077 101675539 -151581044 - L1MC4a LINE L1 -1890 5918 5435 2965 189 102 26 chr2 101675605 101676575 -151580008 - L1MB8 LINE L1 -47 6131 5088 1039 209 81 19 chr2 101676596 101676923 -151579660 + MLT1D LTR MaLR 1 361 -106 1908 126 17 62 chr2 101676937 101677295 -151579288 + LTR3b LTR ERVK 159 500 0 715 75 3 11 chr2 101677295 101677401 -151579182 - MER4D LTR ERV1 -453 144 57 351 118 0 0 chr2 101677455 101677506 -151579077 + HERVK14 LTR ERVK 5834 5884 -61 1875 122 51 6 chr2 101677525 101677837 -151578746 + LTR3b LTR ERVK 158 483 -17 251 224 0 0 chr2 101677843 101677892 -151578691 + LTR3b LTR ERVK 452 500 0 406 224 28 19 chr2 101677893 101678000 -151578583 + MLT1D LTR MaLR 398 505 0 540 158 40 10 chr2 101678004 101678105 -151578478 - MER68 LTR ERV1 -291 271 168 228 217 67 0 chr2 101678110 101678170 -151578413 - L1MB8 LINE L1 -1310 4836 4773 21 36 0 0 chr2 101678338 101678366 -151578217 + AT_rich Low_complexity Low_complexity 1 28 0 1432 114 110 39 chr2 101678379 101678687 -151577896 - MSTB1 LTR MaLR 0 432 103 32 57 0 0 chr2 101678687 101678740 -151577843 + AT_rich Low_complexity Low_complexity 1 53 0 286 255 88 47 chr2 101679069 101679261 -151577322 + L1MB2 LINE L1 3952 4151 -1995 2246 103 27 0 chr2 101681225 101681526 -151575057 + AluSc SINE Alu 1 309 0 3947 183 65 1 chr2 101681711 101682735 -151573848 + L1MB2 LINE L1 4383 5520 -651 180 0 0 0 chr2 101682735 101682755 -151573828 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 3947 183 65 1 chr2 101682755 101683083 -151573500 + L1MB2 LINE L1 5520 5826 -345 1681 121 74 53 chr2 101683281 101683620 -151572963 + L1MB2 LINE L1 5814 6159 -12 21 36 0 0 chr2 101683629 101683657 -151572926 + AT_rich Low_complexity Low_complexity 1 28 0 446 300 8 8 chr2 101684433 101684563 -151572020 + MIR SINE MIR 16 145 -117 23 0 0 0 chr2 101686836 101686859 -151569724 + AT_rich Low_complexity Low_complexity 1 23 0 180 233 186 23 chr2 101688074 101688160 -151568423 - L2 LINE L2 -2 3270 3171 361 333 138 42 chr2 101689627 101690084 -151566499 - L1M2 LINE L1 -5450 1399 899 410 115 0 26 chr2 101690831 101690909 -151565674 - AluJo SINE Alu 0 312 237 925 171 0 6 chr2 101690911 101691081 -151565502 - AluJo SINE Alu -143 169 1 29 28 0 0 chr2 101691432 101691468 -151565115 + AT_rich Low_complexity Low_complexity 1 36 0 2059 85 32 4 chr2 101691503 101691784 -151564799 + AluSq SINE Alu 1 289 -24 742 216 0 22 chr2 101692187 101692368 -151564215 + MER69A DNA AcHobo 1 177 0 967 210 16 0 chr2 101692731 101692917 -151563666 + MER5A DNA MER1_type 1 189 0 490 235 182 27 chr2 101693024 101693211 -151563372 + MIR SINE MIR 29 244 -18 919 228 263 5 chr2 101693385 101693776 -151562807 + L2 LINE L2 2160 2651 -663 761 297 52 101 chr2 101694205 101694909 -151561674 + L2 LINE L2 2653 3313 0 2335 104 3 16 chr2 101696530 101696847 -151559736 + AluSq SINE Alu 1 313 0 1080 95 80 20 chr2 101697050 101697250 -151559333 - L1MA8 LINE L1 -3 6288 6077 308 259 130 65 chr2 101697529 101697714 -151558869 + MIR SINE MIR 65 261 -1 222 226 193 18 chr2 101697719 101697812 -151558771 - MIR SINE MIR -64 144 41 524 264 62 23 chr2 101698089 101698440 -151558143 - MLT1I LTR MaLR -2 407 1 749 98 0 72 chr2 101698724 101698918 -151557665 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 1368 179 3 83 chr2 101698924 101699225 -151557358 - AluJo SINE Alu -35 277 1 607 226 45 30 chr2 101699306 101699505 -151557078 + L1MC5 LINE L1 7689 7890 -71 261 294 0 0 chr2 101700526 101700618 -151555965 + (TA)n Simple_repeat Simple_repeat 1 92 0 249 300 0 0 chr2 101700635 101700725 -151555858 - L1MC4 LINE L1 -1339 6703 6614 278 130 0 19 chr2 101700728 101700782 -151555801 + (TA)n Simple_repeat Simple_repeat 1 53 0 2144 110 0 0 chr2 101700993 101701274 -151555309 + AluSq SINE Alu 1 281 -32 338 264 22 0 chr2 101701274 101701365 -151555218 - L2 LINE L2 -23 3249 3157 1621 138 10 48 chr2 101701979 101702270 -151554313 - AluJb SINE Alu -11 301 22 21 0 0 0 chr2 101702506 101702527 -151554056 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 101703188 101703216 -151553367 + AT_rich Low_complexity Low_complexity 1 28 0 1626 136 26 63 chr2 101703237 101703539 -151553044 - AluSg SINE Alu -19 291 1 1601 193 94 39 chr2 101703925 101704116 -151552467 - L1MD2 LINE L1 -13 6346 6167 261 0 0 0 chr2 101704116 101704145 -151552438 + (TG)n Simple_repeat Simple_repeat 2 30 0 1601 193 94 39 chr2 101704145 101704420 -151552163 - L1MD2 LINE L1 -192 6167 5854 335 198 49 25 chr2 101704420 101704501 -151552082 + MIR SINE MIR 45 127 -135 1721 172 3 3 chr2 101704652 101704942 -151551641 - AluJo SINE Alu -20 292 3 717 207 99 24 chr2 101705336 101705549 -151551034 + L2 LINE L2 3014 3242 -71 557 141 23 23 chr2 101705549 101705677 -151550906 + CT-rich Low_complexity Low_complexity 1 128 0 2299 116 0 0 chr2 101705679 101705980 -151550603 - AluSq SINE Alu -12 301 1 1304 224 84 106 chr2 101706234 101706967 -151549616 + L1ME3A LINE L1 4904 5588 -582 2123 115 21 27 chr2 101706967 101707305 -151549278 - MER1B DNA MER1_type 0 337 2 1304 224 84 106 chr2 101707305 101707790 -151548793 + L1ME3A LINE L1 5588 6082 -88 2025 132 33 7 chr2 101707961 101708264 -151548319 + AluSx SINE Alu 2 312 0 1877 170 3 22 chr2 101708295 101708607 -151547976 + AluJb SINE Alu 2 307 -5 2219 77 28 0 chr2 101708760 101709045 -151547538 + AluY SINE Alu 1 293 -18 1758 168 11 4 chr2 101709056 101709336 -151547247 + AluJb SINE Alu 1 282 -30 298 270 14 0 chr2 101709601 101709675 -151546908 + MER5B DNA MER1_type 97 171 -7 1760 168 28 0 chr2 101709836 101710121 -151546462 - AluJb SINE Alu -15 297 5 23 0 0 0 chr2 101710709 101710732 -151545851 + AT_rich Low_complexity Low_complexity 1 23 0 2372 70 0 10 chr2 101710782 101711083 -151545500 + AluY SINE Alu 1 298 -13 22 35 0 0 chr2 101712514 101712543 -151544040 + AT_rich Low_complexity Low_complexity 1 29 0 5984 182 90 9 chr2 101712973 101714345 -151542238 + L1MC3 LINE L1 5595 7076 -709 24 77 0 0 chr2 101715346 101715398 -151541185 + AT_rich Low_complexity Low_complexity 1 52 0 232 270 248 7 chr2 101715864 101716001 -151540582 - MIR SINE MIR -75 187 18 226 244 12 116 chr2 101716606 101716692 -151539891 + MIR3 SINE MIR 104 180 -28 668 155 0 0 chr2 101717009 101717112 -151539471 + AluSg/x SINE Alu 196 298 -12 566 179 31 68 chr2 101717707 101717827 -151538756 + L1M4 LINE L1 788 902 -5507 1811 140 78 3 chr2 101717827 101718149 -151538434 + MER7A DNA MER2_type 1 344 -2 566 179 31 68 chr2 101718149 101718190 -151538393 + L1M4 LINE L1 902 943 -5466 * 1666 175 92 5 chr2 101718173 101718573 -151538010 + L1MB4 LINE L1 5733 6167 -13 3793 236 60 25 chr2 101718578 101720198 -151536385 + L1M4 LINE L1 3952 5698 -728 610 208 0 0 chr2 101720239 101720369 -151536214 + L1MD1 LINE L1 6091 6220 -22 23 54 0 0 chr2 101720480 101720517 -151536066 + AT_rich Low_complexity Low_complexity 1 37 0 4257 221 64 43 chr2 101720629 101721950 -151534633 + L1M4 LINE L1 1 1348 -5194 1839 172 120 0 chr2 101721963 101722446 -151534137 + L1MB7 LINE L1 1044 1584 -4958 25 0 0 0 chr2 101722506 101722531 -151534052 + AT_rich Low_complexity Low_complexity 1 25 0 631 266 26 0 chr2 101722532 101722765 -151533818 + L1MB7 LINE L1 2853 3091 -3553 * 26932 52 5 1 chr2 101722754 101725479 -151531104 + L1PA5 LINE L1 1758 4508 -1646 2440 77 0 3 chr2 101725479 101725789 -151530794 + AluY SINE Alu 1 309 -2 26932 52 5 1 chr2 101725789 101727442 -151529141 + L1PA5 LINE L1 4508 6153 -1 887 235 53 94 chr2 101727520 101727795 -151528788 + L1MB7 LINE L1 3829 4077 -2567 1470 195 66 0 chr2 101727795 101727913 -151528670 + AluJo SINE Alu 1 110 -202 869 63 0 35 chr2 101727913 101728055 -151528528 + (GAAA)n Simple_repeat Simple_repeat 2 138 0 1470 195 66 0 chr2 101728055 101728208 -151528375 + AluJo SINE Alu 110 290 -22 887 235 53 94 chr2 101728208 101728422 -151528161 + L1MB7 LINE L1 4077 4298 -2346 * 2679 213 55 35 chr2 101728421 101728754 -151527829 + L1MB7 LINE L1 4937 5262 -1420 2294 108 0 0 chr2 101728754 101729060 -151527523 + AluSc SINE Alu 1 306 -3 2679 213 55 35 chr2 101729060 101730277 -151526306 + L1MB7 LINE L1 5262 6519 -163 2103 169 5 12 chr2 101730383 101730802 -151525781 - L1M2 LINE L1 -513 5778 5363 584 270 11 0 chr2 101730823 101731012 -151525571 + L1MC/D LINE L1 5593 5783 -2025 850 165 0 0 chr2 101731038 101731202 -151525381 - L1M2 LINE L1 -1022 5124 4961 3775 142 20 22 chr2 101731206 101731889 -151524694 + L1MA4A LINE L1 5620 6301 -2 2693 207 176 83 chr2 101731897 101732422 -151524161 + L1MC4 LINE L1 6185 6660 -1382 2949 83 39 21 chr2 101732422 101732858 -151523725 + MLT2A1 LTR ERVL 1 444 0 2693 207 176 83 chr2 101732858 101733472 -151523111 + L1MC4 LINE L1 6660 7216 -826 1652 98 118 8 chr2 101733472 101733758 -151522825 - AluSx SINE Alu 0 314 1 2693 207 176 83 chr2 101733758 101734317 -151522266 + L1MC4 LINE L1 7216 8041 -1 1279 282 119 22 chr2 101734338 101735255 -151521328 - L1MEc LINE L1 -4038 2525 1368 676 261 47 22 chr2 101735257 101735576 -151521007 - L1MEc LINE L1 -5085 1416 1030 730 145 15 14 chr2 101735929 101736075 -151520508 + MLT1A2 LTR MaLR 257 374 0 1215 211 139 66 chr2 101736177 101736685 -151519898 + MLT1G3 LTR MaLR 1 514 -16 419 293 93 41 chr2 101738978 101739264 -151517319 - L2 LINE L2 -261 3052 2751 319 329 75 12 chr2 101739496 101739657 -151516926 + L1MC4 LINE L1 7800 7970 -72 3032 163 21 11 chr2 101739752 101740379 -151516204 + L1MB3 LINE L1 5215 5847 -336 1376 101 26 3 chr2 101740374 101740662 -151515921 - L1ME1 LINE L1 -614 5540 4728 * 1866 239 29 52 chr2 101740634 101741254 -151515329 + L1ME1 LINE L1 5555 6160 -6 263 190 55 12 chr2 101742029 101742147 -151514436 + L1M LINE L1 5299 5420 -745 228 217 17 0 chr2 101743300 101743360 -151513223 + MER46C DNA MER2_type 277 337 -1 189 256 0 0 chr2 101744670 101744713 -151511870 + L2 LINE L2 1866 1908 -1406 293 312 50 20 chr2 101745007 101745155 -151511428 - MIR SINE MIR -60 148 22 1320 242 100 46 chr2 101746800 101747341 -151509242 + MLT1E LTR MaLR 24 593 0 955 215 78 0 chr2 101747361 101747566 -151509017 - MER58A DNA MER1_type -3 221 1 2619 48 3 0 chr2 101749276 101749585 -151506998 + AluY SINE Alu 1 310 -1 1799 108 115 14 chr2 101749619 101749898 -151506685 - AluSg SINE Alu -3 307 1 433 254 57 25 chr2 101750344 101750466 -151506117 + L2 LINE L2 3188 3313 0 779 246 57 9 chr2 101754112 101754340 -151502243 + MER8 DNA MER2_type 1 239 0 3137 182 118 14 chr2 101754581 101755341 -151501242 + Charlie1a DNA MER1_type 3 841 -614 1520 178 52 57 chr2 101755341 101755780 -151500803 + Charlie1a DNA MER1_type 1017 1453 -2 2173 108 9 29 chr2 101756031 101756346 -151500237 + AluSx SINE Alu 1 309 -3 1684 115 165 0 chr2 101759947 101760208 -151496375 + AluSx SINE Alu 1 304 -8 2026 112 3 18 chr2 101761819 101762124 -151494459 + AluSx SINE Alu 1 301 0 30 0 0 0 chr2 101762205 101762235 -151494348 + AT_rich Low_complexity Low_complexity 1 30 0 2043 152 53 15 chr2 101762824 101763219 -151493364 + MSTB1 LTR MaLR 22 431 -1 2014 99 108 0 chr2 101763540 101763864 -151492719 - MER46B DNA MER2_type -2 234 1 376 316 63 6 chr2 101764385 101764543 -151492040 - L2 LINE L2 -213 3059 2893 30 83 0 0 chr2 101765611 101765683 -151490900 + AT_rich Low_complexity Low_complexity 1 72 0 332 232 14 0 chr2 101767786 101767855 -151488728 + MIR3 SINE MIR 108 177 -31 945 104 110 32 chr2 101768415 101768569 -151488014 + AluSg/x SINE Alu 130 295 -17 22 0 0 0 chr2 101770491 101770513 -151486070 + AT_rich Low_complexity Low_complexity 1 22 0 977 187 35 5 chr2 101771173 101771371 -151485212 - MER20 DNA MER1_type 0 219 16 2136 129 0 6 chr2 101771623 101771934 -151484649 + AluSx SINE Alu 1 309 -3 1080 100 0 0 chr2 101772870 101773010 -151483573 + AluSq/x SINE Alu 1 140 -173 246 269 15 15 chr2 101776067 101776134 -151480449 + MIR SINE MIR 75 141 -67 2103 130 0 0 chr2 101776142 101776434 -151480149 + AluSg1 SINE Alu 1 292 -17 1575 84 138 226 chr2 101776660 101777255 -151479328 + LTR12 LTR ERV1 3 480 -234 * 27119 95 7 11 chr2 101777233 101782069 -151474514 + HERV17 LTR ERV1 55 4954 -3445 1788 105 96 64 chr2 101782062 101782481 -151474102 + HERV17 LTR ERV1 711 1271 -5625 * 1142 86 32 27 chr2 101782464 101782715 -151473868 + HERV17 LTR ERV1 1275 1708 -5188 * 5046 89 19 29 chr2 101783957 101784739 -151471844 + HERV17 LTR ERV1 7626 8399 0 1391 107 79 93 chr2 101784739 101785177 -151471406 + LTR12 LTR ERV1 1 2038 -400 279 190 51 0 chr2 101785177 101785256 -151471327 + LTR30 LTR ERV1 561 643 -79 662 128 0 0 chr2 101785256 101785358 -151471225 + LTR12 LTR ERV1 613 714 0 216 0 0 0 chr2 101785699 101785723 -151470860 + (A)n Simple_repeat Simple_repeat 1 24 0 700 277 18 22 chr2 101786662 101786886 -151469697 + L2 LINE L2 2584 2806 -508 400 296 56 32 chr2 101786882 101787007 -151469576 + L2 LINE L2 3145 3272 0 * 2127 122 16 3 chr2 101787231 101787534 -151469049 - AluSx SINE Alu -5 307 1 198 0 0 0 chr2 101787571 101787593 -151468990 + (A)n Simple_repeat Simple_repeat 1 22 0 1965 149 0 26 chr2 101789221 101789529 -151467054 - AluSx SINE Alu -12 300 1 388 173 142 37 chr2 101790546 101790708 -151465875 - MER104 DNA MER2_type 0 180 2 540 220 57 18 chr2 101793077 101793264 -151463319 - Charlie4a DNA MER1_type -173 335 129 1339 260 74 24 chr2 101793285 101793782 -151462801 - L1ME1 LINE L1 -5 6161 5640 22 56 0 0 chr2 101793845 101793881 -151462702 + AT_rich Low_complexity Low_complexity 1 36 0 2483 84 0 0 chr2 101793998 101794306 -151462277 - AluSg SINE Alu 0 310 3 1656 157 0 11 chr2 101794607 101794869 -151461714 + AluJb SINE Alu 1 259 -53 450 0 0 0 chr2 101794878 101794928 -151461655 + (CCAA)n Simple_repeat Simple_repeat 2 51 0 667 234 114 0 chr2 101795268 101795452 -151461131 - MER3 DNA MER1_type 0 209 5 887 205 0 24 chr2 101796009 101796175 -151460408 + FRAM SINE Alu 1 162 -14 367 252 43 35 chr2 101797944 101798059 -151458524 - L2 LINE L2 -18 3295 3180 207 240 131 46 chr2 101798086 101798261 -151458322 - L2 LINE L2 -613 2701 2512 339 316 18 11 chr2 101798695 101798819 -151457764 + MIR SINE MIR 1 123 -85 1887 174 0 13 chr2 101798901 101799205 -151457378 - AluJo SINE Alu -12 300 1 390 293 46 25 chr2 101800718 101800957 -151455626 + L1MC3 LINE L1 110 353 -6070 4018 249 67 28 chr2 101800979 101802137 -151454446 + L1MC3 LINE L1 3609 4721 -2220 1244 102 112 0 chr2 101802137 101802343 -151454240 - MER30 DNA MER1_type -1 229 1 4018 249 67 28 chr2 101802343 101802466 -151454117 + L1MC3 LINE L1 4721 4838 -2103 2122 88 3 30 chr2 101802466 101802762 -151453821 + AluSc SINE Alu 1 288 -21 4018 249 67 28 chr2 101802762 101803205 -151453378 + L1MC3 LINE L1 4838 5401 -1540 758 205 112 28 chr2 101803205 101803454 -151453129 + L1MD3 LINE L1 7710 7979 -16 2556 234 85 29 chr2 101803479 101803916 -151452667 + L1MC3 LINE L1 5408 5430 -1511 1429 155 48 82 chr2 101803916 101804270 -151452313 + MER2 DNA MER2_type 3 344 0 2556 234 85 29 chr2 101804270 101805085 -151451498 + L1MC3 LINE L1 5430 6198 -743 339 207 49 0 chr2 101805107 101805189 -151451394 + L1ME1 LINE L1 6067 6152 -14 213 278 28 0 chr2 101805200 101805272 -151451311 + (TA)n Simple_repeat Simple_repeat 2 75 0 207 0 0 0 chr2 101805283 101805306 -151451277 + (T)n Simple_repeat Simple_repeat 1 23 0 189 0 0 0 chr2 101805672 101805693 -151450890 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 280 250 13 0 chr2 101806082 101806158 -151450425 - HsTC2 DNA Tc2 -1793 105 29 593 52 0 0 chr2 101806158 101806235 -151450348 + L1PA11 LINE L1 6098 6174 0 2003 257 132 40 chr2 101806651 101807021 -151449562 + L2 LINE L2 2125 2460 -853 15512 128 39 15 chr2 101807021 101807722 -151448861 + Tigger1 DNA MER2_type 4 687 -1731 2237 110 20 0 chr2 101807722 101808023 -151448560 - AluSq SINE Alu -6 307 1 15512 128 39 15 chr2 101808023 101808878 -151447705 + Tigger1 DNA MER2_type 687 1520 -898 2125 114 0 35 chr2 101808878 101809194 -151447389 + AluSx SINE Alu 1 305 -7 15512 128 39 15 chr2 101809194 101809995 -151446588 + Tigger1 DNA MER2_type 1520 2418 0 2003 257 132 40 chr2 101809995 101810712 -151445871 + L2 LINE L2 2460 3309 -4 1954 137 3 10 chr2 101810983 101811282 -151445301 + AluSx SINE Alu 1 297 -15 281 350 0 0 chr2 101811287 101811427 -151445156 - L1MC4a LINE L1 -1904 5904 5765 22 35 0 0 chr2 101811474 101811503 -151445080 + AT_rich Low_complexity Low_complexity 1 29 0 752 289 57 25 chr2 101812689 101812969 -151443614 + MER102a DNA MER1_type 42 330 0 1497 210 119 40 chr2 101814081 101814577 -151442006 + MLT1E2 LTR MaLR 92 626 0 370 227 164 0 chr2 101815144 101815254 -151441329 - L2 LINE L2 0 3272 3145 535 255 102 6 chr2 101815402 101815559 -151441024 - MIR SINE MIR -89 173 2 12354 127 59 28 chr2 101816265 101818875 -151437708 + L1MA3 LINE L1 19 3029 -4536 6339 135 30 6 chr2 101818878 101820094 -151436489 + L1MA3 LINE L1 6481 7724 0 5077 227 98 24 chr2 101820851 101821443 -151435140 - L1M4 LINE L1 -2000 4957 4410 2157 72 11 7 chr2 101821443 101821742 -151434841 - AluY SINE Alu 0 300 1 5077 227 98 24 chr2 101821742 101822395 -151434188 - L1M4 LINE L1 -2547 4410 3807 1350 165 62 9 chr2 101822395 101822619 -151433964 - MER46A DNA MER2_type 0 236 1 5077 227 98 24 chr2 101822619 101823052 -151433531 - L1M4 LINE L1 -3150 3807 3152 1307 264 157 25 chr2 101823052 101823601 -151432982 - L1M4 LINE L1 -6221 638 18 1090 230 24 43 chr2 101823627 101823860 -151432723 - L1MEc LINE L1 -3655 2491 2299 192 40 0 0 chr2 101823860 101823885 -151432698 + (TCTA)n Simple_repeat Simple_repeat 4 28 0 1090 230 24 43 chr2 101823885 101824072 -151432511 - L1MEc LINE L1 -3847 2299 2110 1121 213 67 48 chr2 101825349 101825887 -151430696 - MLT1E3 LTR MaLR 0 624 1 2935 182 125 42 chr2 101826776 101827447 -151429136 + LTR8A LTR ERV1 1 727 0 254 299 0 15 chr2 101827566 101827633 -151428950 + GA-rich Low_complexity Low_complexity 5 70 0 611 225 148 11 chr2 101827846 101828028 -151428555 + LTR52 LTR ERVL 7 213 -208 32514 105 18 54 chr2 101828037 101834421 -151422162 + L1PA7 LINE L1 12 6154 0 545 215 87 51 chr2 101834437 101834632 -151421951 + LTR52 LTR ERVL 204 405 -16 410 255 52 121 chr2 101834737 101835027 -151421556 + MLT1K LTR MaLR 319 588 0 407 261 65 33 chr2 101835051 101835113 -151421470 + L1MC4 LINE L1 7759 7818 -224 2376 138 80 29 chr2 101835113 101835526 -151421057 + Tigger2a DNA MER2_type 1 434 0 407 261 65 33 chr2 101835526 101835616 -151420967 + L1MC4 LINE L1 7818 7916 -126 226 274 145 103 chr2 101835835 101836214 -151420369 - L2 LINE L2 -525 2789 2395 860 244 109 78 chr2 101836560 101836804 -151419779 - MLT1L LTR MaLR -82 533 267 1403 158 121 11 chr2 101836804 101837069 -151419514 - AluSg SINE Alu -16 294 1 860 244 109 78 chr2 101837069 101837275 -151419308 - MLT1L LTR MaLR -348 267 69 523 241 57 21 chr2 101837741 101837882 -151418701 + MLT2F LTR ERVL 1 146 -517 599 236 31 68 chr2 101837888 101838079 -151418504 + MLT1E3 LTR MaLR 54 237 -387 268 142 247 136 chr2 101838180 101838342 -151418241 + MLT2F LTR ERVL 477 656 -7 1571 206 85 15 chr2 101838469 101838809 -151417774 - MLT1A1 LTR MaLR 0 365 2 7282 185 32 56 chr2 101839464 101840766 -151415817 - L1 LINE L1 -2974 3814 2483 2297 35 42 11 chr2 101840766 101841049 -151415534 - AluY SINE Alu -19 292 1 7282 185 32 56 chr2 101841049 101842378 -151414205 - L1 LINE L1 -4305 2483 1149 773 158 0 0 chr2 101842378 101842505 -151414078 + ALR/Alpha Satellite centromeric 1 127 -45 7282 185 32 56 chr2 101842505 101842842 -151413741 - L1 LINE L1 -5639 1149 806 1217 257 23 10 chr2 101842845 101843148 -151413435 - L1M2c LINE L1 -5749 1040 734 22 94 0 0 chr2 101843250 101843314 -151413269 + AT_rich Low_complexity Low_complexity 1 64 0 231 155 83 0 chr2 101845104 101845188 -151411395 + (TA)n Simple_repeat Simple_repeat 1 91 0 919 246 204 47 chr2 101845328 101846132 -151410451 - L2 LINE L2 -3 3310 2301 417 220 87 60 chr2 101847125 101847275 -151409308 + MER20 DNA MER1_type 57 210 -9 4541 205 81 7 chr2 101848231 101849301 -151407282 - L1MD2 LINE L1 -25 6334 5190 283 221 12 23 chr2 101849340 101849426 -151407157 - FRAM SINE Alu -18 148 64 3367 206 95 26 chr2 101849605 101850646 -151405937 + L1ME1 LINE L1 4276 5388 -758 2443 61 7 0 chr2 101850757 101851052 -151405531 + AluSp SINE Alu 16 312 -1 24 53 0 0 chr2 101851821 101851859 -151404724 + AT_rich Low_complexity Low_complexity 1 38 0 279 308 0 44 chr2 101852000 101852091 -151404492 - MER5A DNA MER1_type -18 171 85 234 113 0 113 chr2 101852128 101852181 -151404402 - MIR3 SINE MIR -49 159 113 361 226 217 66 chr2 101853094 101853426 -151403157 + L1M4c LINE L1 958 1339 -5510 647 257 90 31 chr2 101853546 101853869 -151402714 - L1MEd LINE L1 -4862 1668 1327 317 263 109 26 chr2 101854597 101854753 -151401830 - L3 LINE CR1 -523 1054 886 901 264 28 8 chr2 101855334 101855588 -151400995 - MIR SINE MIR -3 259 1 233 336 38 108 chr2 101855719 101856088 -151400495 - L2 LINE L2 -32 3240 2898 582 271 12 29 chr2 101856221 101856465 -151400118 + L1M4c LINE L1 2434 2673 -4177 583 139 0 0 chr2 101856491 101856570 -151400013 + AluS SINE Alu 1 79 -234 2598 219 67 27 chr2 101856689 101856896 -151399687 + L1ME1 LINE L1 5376 5573 -761 2539 68 0 0 chr2 101856896 101857204 -151399379 - AluY SINE Alu -3 308 1 2598 219 67 27 chr2 101857204 101857775 -151398808 + L1ME1 LINE L1 5573 6334 0 2350 65 10 23 chr2 101857780 101858087 -151398496 + AluY SINE Alu 1 303 -8 254 321 0 0 chr2 101858543 101858624 -151397959 + L1ME3 LINE L1 6082 6162 0 23 0 0 0 chr2 101858876 101858899 -151397684 + AT_rich Low_complexity Low_complexity 1 23 0 641 293 0 24 chr2 101859450 101859658 -151396925 - L1MEd LINE L1 -5541 1002 800 469 190 43 167 chr2 101859814 101860072 -151396511 - L1MEd LINE L1 -6202 338 113 1909 202 126 79 chr2 101860079 101860124 -151396459 + L1MDa LINE L1 1396 1437 -5103 2443 77 0 0 chr2 101860124 101860422 -151396161 + AluSg SINE Alu 1 298 -12 1909 202 126 79 chr2 101860422 101860842 -151395741 + L1MDa LINE L1 1437 1836 -4704 1866 152 3 25 chr2 101860842 101861158 -151395425 + AluJb SINE Alu 1 309 -3 1909 202 126 79 chr2 101861158 101861522 -151395061 + L1MDa LINE L1 1836 2265 -4275 * 6070 241 66 59 chr2 101861520 101862770 -151393813 + L1MDa LINE L1 2600 3840 -2700 2456 79 0 9 chr2 101862770 101863085 -151393498 + AluSq SINE Alu 1 312 -1 6070 241 66 59 chr2 101863085 101864560 -151392023 + L1MDa LINE L1 3840 5344 -1196 22 0 0 0 chr2 101864886 101864908 -151391675 + AT_rich Low_complexity Low_complexity 1 22 0 2338 74 7 0 chr2 101865064 101865360 -151391223 + AluSx SINE Alu 1 298 -14 25 31 0 0 chr2 101865578 101865610 -151390973 + AT_rich Low_complexity Low_complexity 1 32 0 189 267 271 32 chr2 101866153 101866374 -151390209 - L2 LINE L2 -101 3171 2898 252 216 0 0 chr2 101866506 101866567 -151390016 - MIR SINE MIR -103 105 45 396 266 35 75 chr2 101866717 101866890 -151389693 + MER5A DNA MER1_type 6 171 -18 2614 260 92 19 chr2 101867816 101868821 -151387762 - L1MC4 LINE L1 -124 7918 6841 2110 225 124 108 chr2 101868812 101870468 -151386115 + L1ME1 LINE L1 3522 5203 -943 * 1670 201 177 79 chr2 101870456 101870469 -151386114 + L1ME1 LINE L1 5420 5430 -904 * 2412 65 0 3 chr2 101870469 101870759 -151385824 + AluY SINE Alu 2 290 -21 1670 201 177 79 chr2 101870759 101871288 -151385295 + L1ME1 LINE L1 5430 6232 -102 238 94 0 0 chr2 101871288 101871320 -151385263 + MER3 DNA MER1_type 16 47 -162 1670 201 177 79 chr2 101871320 101871431 -151385152 + L1ME1 LINE L1 6232 6331 -3 2094 131 0 3 chr2 101871679 101871977 -151384606 + AluSq SINE Alu 1 297 -16 240 291 39 19 chr2 101872930 101873033 -151383550 - MIR SINE MIR -5 257 153 4848 83 0 0 chr2 101873167 101873754 -151382829 + LTR14C LTR ERVK 1 587 0 259 330 70 0 chr2 101874711 101874811 -151381772 + L2 LINE L2 3156 3262 -10 462 247 204 5 chr2 101874930 101875116 -151381467 - MIR SINE MIR 0 262 40 252 0 0 0 chr2 101875268 101875296 -151381287 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 344 247 34 0 chr2 101875969 101876058 -151380525 - MIR SINE MIR -108 154 63 26 0 0 0 chr2 101876545 101876571 -151380012 + AT_rich Low_complexity Low_complexity 1 26 0 1596 184 7 20 chr2 101877047 101877352 -151379231 + AluJo SINE Alu 1 301 -11 180 0 0 0 chr2 101878229 101878249 -151378334 + (CATTC)n Simple_repeat Simple_repeat 1 20 0 234 245 202 21 chr2 101878713 101878807 -151377776 - MIR SINE MIR -86 176 66 1213 147 0 0 chr2 101879957 101880134 -151376449 + AluJb SINE Alu 132 308 -4 1828 111 4 0 chr2 101880175 101880419 -151376164 + AluSx SINE Alu 4 248 -64 616 272 31 6 chr2 101880428 101880590 -151375993 + L1MEc LINE L1 516 681 -5715 283 191 0 48 chr2 101880601 101880664 -151375919 + AluSx SINE Alu 243 302 0 305 61 0 20 chr2 101880684 101880733 -151375850 + (GGGA)n Simple_repeat Simple_repeat 1 48 0 336 48 0 0 chr2 101880733 101880775 -151375808 + (CAGG)n Simple_repeat Simple_repeat 2 43 0 1893 157 35 155 chr2 101880809 101881383 -151375200 + MLT1D LTR MaLR 1 505 0 5078 247 77 19 chr2 101881516 101882645 -151373938 + L1ME1 LINE L1 74 1325 -5071 216 0 0 0 chr2 101882645 101882669 -151373914 + (GGA)n Simple_repeat Simple_repeat 1 24 0 5078 247 77 19 chr2 101882669 101883136 -151373447 + L1ME1 LINE L1 1325 1763 -4633 7149 216 80 26 chr2 101883143 101884120 -151372463 + L1ME1 LINE L1 2627 3549 -2686 180 0 0 0 chr2 101884120 101884140 -151372443 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 7149 216 80 26 chr2 101884140 101885707 -151370876 + L1ME1 LINE L1 3549 5509 -726 13376 115 30 109 chr2 101885708 101886053 -151370530 - Tigger1 DNA MER2_type 0 2418 2047 2131 113 0 3 chr2 101886053 101886345 -151370238 + AluSg SINE Alu 1 291 -19 13376 115 30 109 chr2 101886345 101886679 -151369904 - Tigger1 DNA MER2_type -371 2047 1688 1143 182 82 0 chr2 101886679 101886899 -151369684 - AluJb SINE Alu -42 270 33 13376 115 30 109 chr2 101886899 101888624 -151367959 - Tigger1 DNA MER2_type -730 1688 1 2647 214 65 25 chr2 101888624 101889275 -151367308 + L1ME1 LINE L1 5509 6185 -50 324 0 0 0 chr2 101889278 101889314 -151367269 + (A)n Simple_repeat Simple_repeat 1 36 0 225 327 10 0 chr2 101889347 101889451 -151367132 - L1MC/D LINE L1 -1903 5905 5801 2144 96 0 0 chr2 101889551 101889822 -151366761 - AluSp SINE Alu -42 271 1 1131 166 5 10 chr2 101889822 101890015 -151366568 - L1MD2 LINE L1 -466 5893 5702 1493 197 6 12 chr2 101890017 101890347 -151366236 - L1MD2 LINE L1 -941 5205 4878 644 197 0 8 chr2 101890334 101890461 -151366122 - L1MD2 LINE L1 -1488 4658 4533 * 245 220 0 0 chr2 101890496 101890546 -151366037 - L1MC4 LINE L1 -142 7900 7851 2257 104 0 0 chr2 101890572 101890869 -151365714 - AluY SINE Alu -14 297 1 269 307 26 33 chr2 101890900 101891053 -151365530 + L3 LINE CR1 1351 1502 -75 380 234 153 0 chr2 101891072 101891183 -151365400 - MIR SINE MIR -20 242 115 21 36 0 0 chr2 101891339 101891367 -151365216 + AT_rich Low_complexity Low_complexity 1 28 0 1747 222 32 38 chr2 101891890 101892359 -151364224 - MLT1C LTR MaLR 0 467 2 256 317 108 17 chr2 101893000 101893120 -151363463 + L2 LINE L2 3180 3310 -3 848 165 26 88 chr2 101893215 101893284 -151363299 - MER3 DNA MER1_type -27 182 110 2226 113 0 0 chr2 101893284 101893575 -151363008 + AluSx SINE Alu 1 291 -21 848 165 26 88 chr2 101893575 101893699 -151362884 - MER3 DNA MER1_type -99 110 1 191 273 65 0 chr2 101893884 101893961 -151362622 + L2 LINE L2 2887 2968 -304 435 294 20 20 chr2 101894421 101894574 -151362009 + MER93a LTR ERV1 46 198 -204 2390 129 12 6 chr2 101894577 101894911 -151361672 + MER1B DNA MER1_type 2 337 0 1598 137 157 0 chr2 101894943 101895192 -151361391 + AluSx SINE Alu 1 288 -14 1139 294 76 13 chr2 101895329 101895948 -151360635 - L1MEc LINE L1 -2613 3602 2945 1068 266 129 72 chr2 101895975 101896524 -151360059 - L1MEc LINE L1 -3873 2523 2007 1460 183 14 38 chr2 101896524 101896813 -151359770 - AluJo SINE Alu -30 282 1 1068 266 129 72 chr2 101896813 101897409 -151359174 - L1MEc LINE L1 -4389 2007 1313 536 156 0 0 chr2 101897760 101897837 -151358746 - FLAM_A SINE Alu -55 77 1 1184 138 0 0 chr2 101898814 101898974 -151357609 - FRAM SINE Alu -6 160 1 522 252 5 79 chr2 101899036 101899250 -151357333 - HsTC2 DNA Tc2 -1674 224 27 204 265 61 0 chr2 101900436 101900485 -151356098 + L2 LINE L2 3205 3256 -16 406 234 166 23 chr2 101901100 101901136 -151355447 + MIR SINE MIR 30 60 -202 2290 232 62 14 chr2 101901136 101901653 -151354930 - MLT1F LTR MaLR 0 542 1 406 234 166 23 chr2 101901653 101901791 -151354792 + MIR SINE MIR 60 229 -33 640 232 67 102 chr2 101902040 101902207 -151354376 + MLT1F LTR MaLR 352 627 -27 24 32 0 0 chr2 101902284 101902315 -151354268 + AT_rich Low_complexity Low_complexity 1 31 0 2698 90 130 8 chr2 101902385 101902784 -151353799 - LTR7 LTR ERV1 -2 448 1 347 121 0 35 chr2 101902854 101902912 -151353671 - MLT2B3 LTR ERVL 0 554 499 617 56 11 0 chr2 101902913 101903003 -151353580 + (TAGA)n Simple_repeat Simple_repeat 3 93 0 2900 186 14 7 chr2 101903005 101903528 -151353055 - MLT2B3 LTR ERVL -34 515 1 2129 189 49 20 chr2 101903534 101903984 -151352599 - MLT1C LTR MaLR -1 466 4 219 157 0 20 chr2 101904708 101904746 -151351837 + (TTAA)n Simple_repeat Simple_repeat 3 41 -11 2177 100 0 0 chr2 101904746 101905027 -151351556 - AluSx SINE Alu -31 281 1 219 157 0 20 chr2 101905027 101905039 -151351544 + (TTAA)n Simple_repeat Simple_repeat 41 52 0 4828 91 24 18 chr2 101905101 101905761 -151350822 + MER4A LTR ERV1 1 664 0 2848 86 25 93 chr2 101905913 101906438 -151350145 - LTR21A LTR ERV1 -16 489 1 2354 85 3 0 chr2 101906670 101906964 -151349619 - AluSp SINE Alu -17 296 2 1227 166 105 44 chr2 101907154 101907449 -151349134 + L1ME2 LINE L1 5850 6162 -2 300 225 0 28 chr2 101907488 101907559 -151349024 + L1MC4 LINE L1 6635 6703 -1339 693 273 12 0 chr2 101907604 101907776 -151348807 - L1MB7 LINE L1 -10 6174 6001 306 281 94 79 chr2 101907930 101908133 -151348450 + L1M2a LINE L1 1075 1280 -5888 427 246 175 64 chr2 101908877 101909048 -151347535 - MER45C DNA AcHobo 0 953 764 961 239 72 8 chr2 101909099 101909350 -151347233 - MER45C DNA AcHobo -686 267 1 218 309 127 0 chr2 101909469 101909579 -151347004 + MIR SINE MIR 58 181 -81 2428 89 0 0 chr2 101909849 101910152 -151346431 - AluSx SINE Alu -9 303 1 4471 129 14 17 chr2 101910415 101911128 -151345455 + MER50 LTR ERV1 1 711 -23 1794 205 48 31 chr2 101911715 101912169 -151344414 - MLT1C LTR MaLR 0 467 6 745 211 48 36 chr2 101912268 101912434 -151344149 - MER45A DNA AcHobo -1 177 10 264 270 95 7 chr2 101912529 101912666 -151343917 + LTR16C LTR ERVL 343 491 0 21 0 0 0 chr2 101912692 101912713 -151343870 + AT_rich Low_complexity Low_complexity 1 21 0 2251 117 0 3 chr2 101912816 101913116 -151343467 + AluSg SINE Alu 1 299 -11 3022 223 82 13 chr2 101913122 101914301 -151342282 + L1MDa LINE L1 16 1436 -5104 2582 82 0 38 chr2 101914302 101914669 -151341914 + MER4A LTR ERV1 1 353 -311 2156 108 16 7 chr2 101914716 101915023 -151341560 + MER4A LTR ERV1 355 664 0 2994 172 70 56 chr2 101915030 101915811 -151340772 + L1MDa LINE L1 1440 2231 -4309 866 159 0 20 chr2 101915883 101916034 -151340549 - LTR7 LTR ERV1 0 450 303 868 119 10 26 chr2 101916268 101916437 -151340146 - LTR7 LTR ERV1 -232 218 1 262 191 73 0 chr2 101916438 101916506 -151340077 - HERVH LTR ERV1 -7624 89 17 1999 96 87 9 chr2 101916525 101916890 -151339693 - LTR7 LTR ERV1 0 450 1 499 127 30 30 chr2 101916907 101917041 -151339542 + L1MDa LINE L1 2393 2526 -4014 1594 199 112 29 chr2 101917076 101917488 -151339095 - MLT1C LTR MaLR 0 467 22 4651 56 0 0 chr2 101917488 101918042 -151338541 + MER41A LTR ERV1 1 554 0 7046 173 96 68 chr2 101918214 101918781 -151337802 + MER41A-int LTR ERV1 1 551 -5395 2299 79 17 0 chr2 101918781 101919073 -151337510 - AluSp SINE Alu -8 305 9 234 0 0 0 chr2 101919073 101919099 -151337484 + (CCTTG)n Simple_repeat Simple_repeat 1 26 0 1158 85 0 0 chr2 101919099 101919276 -151337307 + (TTTCC)n Simple_repeat Simple_repeat 1 177 0 7046 173 96 68 chr2 101919276 101919353 -151337230 + MER41A-int LTR ERV1 551 624 -5322 2216 105 3 0 chr2 101919353 101919648 -151336935 - AluSp SINE Alu -17 296 1 7046 173 96 68 chr2 101919648 101920727 -151335856 + MER41A-int LTR ERV1 624 1775 -4171 795 113 144 10 chr2 101920714 101920869 -151335714 + MER41A-int LTR ERV1 1503 2017 -3929 * 251 148 56 0 chr2 101920837 101920891 -151335692 + MER41A-int LTR ERV1 2159 2215 -3731 * 13186 151 72 78 chr2 101920892 101922562 -151334021 + MER41A-int LTR ERV1 2667 4346 -1600 2213 125 0 0 chr2 101922562 101922859 -151333724 - AluSq SINE Alu -16 297 1 13186 151 72 78 chr2 101922859 101923639 -151332944 + MER41A-int LTR ERV1 4346 5129 -817 1785 124 4 29 chr2 101923639 101923914 -151332669 + AluSx SINE Alu 28 295 -17 13186 151 72 78 chr2 101923914 101924761 -151331822 + MER41A-int LTR ERV1 5129 5944 -2 4353 80 2 16 chr2 101924761 101925323 -151331260 + MER41A LTR ERV1 1 554 0 387 265 15 8 chr2 101925345 101925477 -151331106 + L1MDa LINE L1 2714 2846 -3694 480 229 110 8 chr2 101926394 101926512 -151330071 - FLAM_A SINE Alu -2 131 2 330 339 8 0 chr2 101927160 101927278 -151329305 - MIR SINE MIR -66 142 24 2233 80 3 10 chr2 101927672 101927991 -151328592 - AluSp SINE Alu 0 317 1 21 36 0 0 chr2 101927994 101928022 -151328561 + AT_rich Low_complexity Low_complexity 1 28 0 1771 193 38 63 chr2 101928708 101929215 -151327368 + Charlie4a DNA MER1_type 14 507 -1 1918 205 47 11 chr2 101929456 101929904 -151326679 + MLT1C LTR MaLR 4 467 0 1329 140 14 0 chr2 101931232 101931453 -151325130 - L1MB7 LINE L1 -16 6168 5945 696 164 0 0 chr2 101931539 101931643 -151324940 + MER50 LTR ERV1 631 734 0 2958 218 34 31 chr2 101932061 101932141 -151324442 - L1M4 LINE L1 -1315 4831 4753 7593 39 0 0 chr2 101932141 101933660 -151322923 - L1PA3 LINE L1 -2 6153 4635 2958 218 34 31 chr2 101933660 101934395 -151322188 - L1M4 LINE L1 -1393 4753 4013 1001 94 0 36 chr2 101934408 101934546 -151322037 - AluSq/x SINE Alu -179 133 1 2876 258 50 19 chr2 101934546 101934721 -151321862 - L1M4 LINE L1 -2120 4026 3858 2778 167 43 4 chr2 101934721 101935189 -151321394 + MER66B LTR ERV1 1 486 0 2876 258 50 19 chr2 101935189 101936134 -151320449 - L1M4 LINE L1 -2288 3858 2849 2332 67 10 42 chr2 101936296 101936608 -151319975 + AluY SINE Alu 1 302 -9 539 119 28 42 chr2 101936634 101936777 -151319806 + CT-rich Low_complexity Low_complexity 4 144 0 2174 102 7 3 chr2 101936821 101937114 -151319469 - AluSq SINE Alu -19 294 1 2201 114 3 0 chr2 101938766 101939064 -151317519 - AluSx SINE Alu -13 299 1 2289 103 7 0 chr2 101939429 101939729 -151316854 + AluSg SINE Alu 1 302 -8 377 173 120 45 chr2 101939812 101939945 -151316638 - L1ME4a LINE L1 -2 6119 5977 249 202 225 58 chr2 101939952 101940125 -151316458 - L1ME4a LINE L1 -207 5914 5713 1984 145 6 22 chr2 101940136 101940453 -151316130 + AluSx SINE Alu 1 312 0 2234 122 0 0 chr2 101940636 101940947 -151315636 - AluSx SINE Alu 0 312 2 459 197 99 40 chr2 101942186 101942338 -151314245 - L1MD2 LINE L1 0 6359 6199 421 243 36 0 chr2 101942688 101942799 -151313784 - L1MD2 LINE L1 -2 6357 6243 1135 194 149 16 chr2 101943086 101943462 -151313121 + LTR37A LTR ERV1 1 426 0 623 259 44 6 chr2 101944045 101944203 -151312380 + MLT1J1 LTR MaLR 1 164 -282 2823 169 192 9 chr2 101944342 101944999 -151311584 - L1 LINE L1 -1209 4937 4161 1874 193 11 6 chr2 101945052 101945415 -151311168 - MLT1A1 LTR MaLR 0 365 1 2309 131 54 56 chr2 101945487 101945916 -151310667 - MSTA LTR MaLR 0 428 1 9755 160 9 21 chr2 101945916 101946237 -151310346 - MSTA-int LTR MaLR 0 1651 1327 17976 35 2 14 chr2 101946237 101949131 -151307452 + L1PA5 LINE L1 3259 6140 -14 9755 160 9 21 chr2 101949131 101950481 -151306102 - MSTA-int LTR MaLR -323 1328 1 2229 143 48 84 chr2 101950483 101950925 -151305658 - MSTA LTR MaLR -2 426 1 1777 199 86 30 chr2 101951715 101952148 -151304435 - MSTB2 LTR MaLR 0 457 1 1762 124 11 14 chr2 101952339 101952621 -151303962 - THE1A LTR MaLR -74 281 1 2127 106 0 0 chr2 101952957 101953250 -151303333 - AluSx SINE Alu -19 293 1 279 0 0 0 chr2 101953280 101953311 -151303272 + (TG)n Simple_repeat Simple_repeat 1 31 0 305 250 0 25 chr2 101953555 101953635 -151302948 + MLT1I LTR MaLR 71 148 -261 270 261 70 0 chr2 101953767 101953882 -151302701 - L1ME LINE L1 -299 5822 5700 21 36 0 0 chr2 101953925 101953953 -151302630 + AT_rich Low_complexity Low_complexity 1 28 0 2242 96 10 3 chr2 101954044 101954345 -151302238 - AluSg SINE Alu -7 303 1 2342 97 7 0 chr2 101955095 101955395 -151301188 - AluSq SINE Alu -11 302 1 689 274 56 0 chr2 101955576 101955791 -151300792 + MIR SINE MIR 2 228 -34 183 220 60 20 chr2 101958810 101958860 -151297723 - MIR SINE MIR -118 144 93 2118 87 0 81 chr2 101960095 101960416 -151296167 - AluSx SINE Alu -17 295 1 204 332 116 66 chr2 101960529 101960788 -151295795 - L2 LINE L2 -1 3271 3000 26 0 0 0 chr2 101961155 101961181 -151295402 + AT_rich Low_complexity Low_complexity 1 26 0 1590 116 69 96 chr2 101962080 101962383 -151294200 - AluJo SINE Alu -17 295 1 244 304 88 39 chr2 101962534 101962728 -151293855 + MIR SINE MIR 1 206 -56 846 261 30 20 chr2 101962779 101962982 -151293601 + MIR SINE MIR 21 225 -37 306 216 12 80 chr2 101963674 101963699 -151292884 - L1ME4a LINE L1 -4 6117 6092 2346 91 0 0 chr2 101963699 101964017 -151292566 + AluSg SINE Alu 1 318 0 306 216 12 80 chr2 101964017 101964152 -151292431 - L1ME4a LINE L1 -29 6092 5967 396 0 0 0 chr2 101964153 101964197 -151292386 + (TA)n Simple_repeat Simple_repeat 1 44 0 301 220 62 26 chr2 101964274 101964368 -151292215 - L1ME4a LINE L1 -351 5815 5720 343 221 0 26 chr2 101964715 101964792 -151291791 - Charlie7 DNA MER1_type -4 2608 2534 12386 145 32 13 chr2 101964856 101967607 -151288976 - L1MA8 LINE L1 -4 7706 4896 2355 104 0 0 chr2 101967607 101967904 -151288679 - AluSx SINE Alu -15 297 1 12386 145 32 13 chr2 101967904 101968253 -151288330 - L1MA8 LINE L1 -2814 4896 4555 711 158 12 48 chr2 101968261 101968426 -151288157 - L1MA8 LINE L1 -3073 4492 4334 5122 120 26 28 chr2 101968441 101969274 -151287309 - L1PB3 LINE L1 0 6154 5323 * 5379 221 55 29 chr2 101969263 101971669 -151284914 - L1MA8 LINE L1 -3204 4361 1887 1782 271 75 29 chr2 101971637 101972319 -151284264 - L1MA8 LINE L1 -6311 1178 466 * 255 254 59 34 chr2 101972334 101972452 -151284131 - Charlie7 DNA MER1_type -2491 121 1 236 211 0 16 chr2 101973146 101973208 -151283375 + T-rich Low_complexity Low_complexity 1 113 -8 4453 97 17 62 chr2 101973208 101973906 -151282677 - SVA Other Other -1 1385 719 3485 236 77 68 chr2 101973964 101975535 -151281048 - L1M2 LINE L1 -2400 3815 2241 2685 156 26 2 chr2 101975535 101975957 -151280626 - MSTB1 LTR MaLR 0 432 1 3485 236 77 68 chr2 101975957 101976570 -151280013 - L1M2 LINE L1 -3974 2241 1635 195 129 0 0 chr2 101976572 101976603 -151279980 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 532 230 42 4 chr2 101976612 101976848 -151279735 - L1MD2 LINE L1 -29 6330 6034 357 141 103 0 chr2 101976849 101976927 -151279656 - L1MDa LINE L1 -1090 5450 5365 844 159 8 23 chr2 101976938 101977070 -151279513 + FRAM SINE Alu 23 152 -24 9060 204 65 36 chr2 101977102 101977224 -151279359 - L1MDa LINE L1 -1198 5342 5225 2305 86 0 0 chr2 101977224 101977549 -151279034 - AluY SINE Alu 0 311 1 9060 204 65 36 chr2 101977549 101980314 -151276269 - L1MDa LINE L1 -1315 5225 2298 2391 106 3 0 chr2 101980314 101980625 -151275958 - AluSp SINE Alu -1 312 1 9060 204 65 36 chr2 101980625 101981915 -151274668 - L1MDa LINE L1 -4242 2298 1046 239 245 0 69 chr2 101981922 101981933 -151274650 - L1MA4A LINE L1 -25 6278 6268 2958 205 61 32 chr2 101981933 101982067 -151274516 - L1PA13 LINE L1 -19 6144 6015 2563 130 8 19 chr2 101982067 101982435 -151274148 + THE1B LTR MaLR 1 364 0 2958 205 61 32 chr2 101982435 101983615 -151272968 - L1PA13 LINE L1 -148 6015 4781 363 23 0 0 chr2 101983615 101983659 -151272924 + (TG)n Simple_repeat Simple_repeat 2 45 0 2958 205 61 32 chr2 101983659 101983715 -151272868 - L1PA13 LINE L1 -1382 4781 4728 1323 280 44 47 chr2 101983715 101984572 -151272011 - L1MEc LINE L1 -4756 1505 651 1411 203 8 4 chr2 101984596 101984833 -151271750 + MER8 DNA MER2_type 2 239 0 1432 191 205 0 chr2 101984896 101985252 -151271331 - L1MB7 LINE L1 -8 6176 5748 336 164 0 0 chr2 101985264 101985319 -151271264 - L1MEc LINE L1 -5520 550 496 481 301 18 6 chr2 101985344 101985510 -151271073 - L1MEc LINE L1 -5900 170 3 27 29 0 0 chr2 101985968 101986002 -151270581 + AT_rich Low_complexity Low_complexity 1 34 0 241 299 65 28 chr2 101986114 101986221 -151270362 + L2 LINE L2 3149 3259 -13 1986 67 0 0 chr2 101986548 101986786 -151269797 + L1PA6 LINE L1 5913 6150 -4 3157 235 35 52 chr2 101987700 101987833 -151268750 - L1PA13 LINE L1 -4555 2232 2098 1589 161 4 11 chr2 101987833 101988100 -151268483 - AluJb SINE Alu -8 304 40 3157 235 35 52 chr2 101988100 101988892 -151267691 - L1PA13 LINE L1 -4689 2098 1323 1934 125 52 0 chr2 101989082 101989370 -151267213 - AluSx SINE Alu -9 303 1 2521 38 0 0 chr2 101989788 101990079 -151266504 + LTR17 LTR ERV1 35 325 -455 279 0 0 0 chr2 101990079 101990110 -151266473 + (TAAAA)n Simple_repeat Simple_repeat 1 31 0 181 292 21 0 chr2 101995519 101995567 -151261016 + L2 LINE L2 3223 3271 -1 405 271 169 34 chr2 101996704 101996881 -151259702 + MIR SINE MIR 1 201 -61 2479 68 3 3 chr2 101996986 101997297 -151259286 - AluY SINE Alu 0 311 1 219 268 110 0 chr2 101998645 101998727 -151257856 - MIR SINE MIR -112 150 60 180 0 0 0 chr2 101998905 101998925 -151257658 + (TG)n Simple_repeat Simple_repeat 1 20 0 1969 169 82 14 chr2 101999903 102000340 -151256243 + MER74A LTR ERVL 1 467 -91 834 198 64 11 chr2 102000343 102000516 -151256067 - MLT1A2 LTR MaLR -5 369 207 323 23 23 0 chr2 102000516 102000560 -151256023 + (GA)n Simple_repeat Simple_repeat 1 45 0 315 0 0 0 chr2 102000559 102000594 -151255989 + (TG)n Simple_repeat Simple_repeat 1 35 0 * 834 198 64 11 chr2 102000560 102000607 -151255976 - MLT1A2 LTR MaLR -167 207 173 316 126 29 19 chr2 102000607 102000710 -151255873 + GA-rich Low_complexity Low_complexity 1 104 0 677 156 40 131 chr2 102000710 102000909 -151255674 - MLT1A2 LTR MaLR -191 183 3 662 131 0 0 chr2 102000909 102001008 -151255575 + MER74A LTR ERVL 460 558 0 222 37 0 0 chr2 102001029 102001056 -151255527 + (TG)n Simple_repeat Simple_repeat 2 28 0 5380 111 26 42 chr2 102001181 102001222 -151255361 - L1MA4A LINE L1 -6 6297 6257 6774 99 34 8 chr2 102001222 102002167 -151254416 - LTR5 LTR ERVK 0 969 1 5380 111 26 42 chr2 102002167 102003001 -151253582 - L1MA4A LINE L1 -46 6257 5436 250 287 87 35 chr2 102003001 102003116 -151253467 - MER5A DNA MER1_type -8 181 61 269 348 18 9 chr2 102003126 102003238 -151253345 - MER5A DNA MER1_type -22 167 55 189 327 53 18 chr2 102003140 102003253 -151253330 + MER5A DNA MER1_type 47 163 -26 * 218 257 360 15 chr2 102004465 102004601 -151251982 - MER5A DNA MER1_type 0 189 7 2889 7 0 0 chr2 102006742 102007051 -151249532 - AluYa5 SINE Alu -2 309 1 804 155 95 24 chr2 102007626 102007794 -151248789 - L1MB3 LINE L1 -1 6182 6003 983 206 80 121 chr2 102007794 102008207 -151248376 - MSTD LTR MaLR 0 396 1 3596 129 28 28 chr2 102008207 102008842 -151247741 - L1MB3 LINE L1 -176 6007 5373 650 174 42 100 chr2 102008844 102009103 -151247480 - MER96B DNA MER1_type? -93 324 81 26 30 0 0 chr2 102009296 102009329 -151247254 + AT_rich Low_complexity Low_complexity 1 33 0 3905 144 22 34 chr2 102010238 102011022 -151245561 + pTR5 LTR ERV1 743 1516 -922 238 203 63 25 chr2 102011122 102011201 -151245382 + LTR30 LTR ERV1 561 642 -80 2370 104 3 0 chr2 102011201 102011527 -151245056 + pTR5 LTR ERV1 66 392 -2046 1985 167 70 39 chr2 102012512 102012925 -151243658 - MSTB LTR MaLR 0 426 1 1185 194 28 80 chr2 102014127 102014327 -151242256 + MER33 DNA MER1_type 17 195 -2390 1980 113 10 0 chr2 102014327 102014618 -151241965 - AluSx SINE Alu -18 294 1 1185 194 28 80 chr2 102014618 102014742 -151241841 + MER33 DNA MER1_type 195 324 0 383 192 27 0 chr2 102014744 102014817 -151241766 + MIR SINE MIR 77 151 -111 344 194 88 153 chr2 102014903 102015019 -151241564 + MIR SINE MIR 3 100 -162 1717 133 10 14 chr2 102015019 102015312 -151241271 - AluJo SINE Alu 0 312 21 344 194 88 153 chr2 102015312 102015411 -151241172 + MIR SINE MIR 100 204 -58 202 164 0 60 chr2 102015419 102015486 -151241097 + (TATG)n Simple_repeat Simple_repeat 2 64 0 868 230 103 86 chr2 102015621 102015833 -151240750 - HAL1b LINE L1 -563 785 578 1992 121 3 7 chr2 102015833 102016138 -151240445 - AluSx SINE Alu -1 311 8 868 230 103 86 chr2 102016138 102016577 -151240006 - HAL1b LINE L1 -770 578 123 767 261 73 37 chr2 102016577 102016795 -151239788 - MIR SINE MIR -35 227 2 244 236 14 14 chr2 102016800 102016872 -151239711 - HAL1b LINE L1 -1181 167 96 1630 161 6 61 chr2 102016984 102017314 -151239269 - AluJo SINE Alu 0 312 1 926 308 165 52 chr2 102018614 102018979 -151237604 - L1ME4a LINE L1 -35 6086 5764 3120 24 0 29 chr2 102018979 102019362 -151237221 - L1PA5 LINE L1 -1 6153 5782 926 308 165 52 chr2 102019362 102019734 -151236849 - L1ME4a LINE L1 -357 5764 5265 2539 119 44 21 chr2 102020521 102021071 -151235512 - MER51A LTR ERV1 0 634 1 309 227 45 23 chr2 102022243 102022331 -151234252 - L1MDa LINE L1 -4881 1659 1570 1882 109 46 0 chr2 102022399 102022683 -151233900 - AluSq SINE Alu -15 298 2 228 231 39 51 chr2 102022759 102022837 -151233746 - MLT1H LTR MaLR -377 172 96 727 286 86 5 chr2 102022928 102023138 -151233445 + MIR SINE MIR 30 256 -6 2276 75 7 10 chr2 102025134 102025440 -151231143 - AluSx SINE Alu -6 306 2 216 237 52 103 chr2 102025476 102025573 -151231010 - L2 LINE L2 -6 3307 3216 258 277 145 0 chr2 102026137 102026220 -151230363 - L2 LINE L2 -17 3255 3161 275 291 78 48 chr2 102026267 102026370 -151230213 - L2 LINE L2 -56 3216 3111 649 311 96 0 chr2 102026703 102026912 -151229671 + MIR SINE MIR 28 256 -6 412 237 145 20 chr2 102027246 102027398 -151229185 - MER5A DNA MER1_type -12 177 7 198 324 39 49 chr2 102029503 102029605 -151226978 - L2 LINE L2 -49 3223 3123 203 270 54 27 chr2 102030184 102030258 -151226325 + L2 LINE L2 3232 3307 -6 1876 107 40 0 chr2 102030519 102030828 -151225755 - AluSx SINE Alu 0 320 1 1923 94 45 10 chr2 102031015 102031303 -151225280 + AluSx SINE Alu 1 298 -14 240 59 0 0 chr2 102031595 102031629 -151224954 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 514 243 86 94 chr2 102032488 102032850 -151223733 + MLT1J LTR MaLR 4 362 -149 568 194 72 164 chr2 102032867 102032946 -151223637 - L1MD1 LINE L1 -5 6237 6152 213 94 0 0 chr2 102032946 102032978 -151223605 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 568 194 72 164 chr2 102032978 102033009 -151223574 - L1MD1 LINE L1 -90 6152 6120 1946 108 0 7 chr2 102033009 102033288 -151223295 - AluSx SINE Alu -35 277 1 568 194 72 164 chr2 102033288 102033480 -151223103 - L1MD1 LINE L1 -122 6120 5962 2121 86 0 0 chr2 102034537 102034851 -151221732 + AluSc SINE Alu 1 314 0 1515 192 16 51 chr2 102034903 102035273 -151221310 - MER31B LTR ERV1 -99 367 11 23 33 0 0 chr2 102035544 102035574 -151221009 + AT_rich Low_complexity Low_complexity 1 30 0 744 253 46 5 chr2 102035693 102035887 -151220696 - MIR SINE MIR -12 250 49 181 250 0 23 chr2 102036168 102036212 -151220371 + MIR SINE MIR 34 76 -132 491 260 147 57 chr2 102036448 102036625 -151219958 - MIR SINE MIR -22 240 48 473 177 7 129 chr2 102036634 102036781 -151219802 - MER5B DNA MER1_type -49 129 1 1472 158 68 96 chr2 102037242 102037334 -151219249 + MLT1B LTR MaLR 4 97 -293 1939 131 0 0 chr2 102037334 102037639 -151218944 + AluSx SINE Alu 1 305 0 1472 158 68 96 chr2 102037639 102037943 -151218640 + MLT1B LTR MaLR 97 390 0 234 0 0 0 chr2 102038079 102038105 -151218478 + (CA)n Simple_repeat Simple_repeat 2 27 0 3488 247 27 7 chr2 102038640 102039506 -151217077 + L1MEc LINE L1 88 970 -5426 366 23 0 0 chr2 102039646 102039689 -151216894 + (CA)n Simple_repeat Simple_repeat 2 44 0 1442 244 61 58 chr2 102039880 102040586 -151215997 + L1MEc LINE L1 983 1690 -4706 910 191 108 0 chr2 102040587 102040818 -151215765 + L1MEc LINE L1 1987 2242 -4154 275 185 12 49 chr2 102040815 102040896 -151215687 + L1MA9 LINE L1 6229 6306 -6 * 423 0 0 0 chr2 102040995 102041042 -151215541 + (TG)n Simple_repeat Simple_repeat 2 48 0 1732 154 0 27 chr2 102041116 102041408 -151215175 + AluJb SINE Alu 1 284 -28 231 103 0 0 chr2 102041408 102041447 -151215136 + (TGAA)n Simple_repeat Simple_repeat 3 41 0 565 265 115 24 chr2 102041477 102041764 -151214819 + MARNA DNA Mariner 130 442 -144 694 232 36 27 chr2 102041863 102041889 -151214694 + MIR SINE MIR 23 47 -215 2141 98 0 7 chr2 102041889 102042184 -151214399 - AluSc SINE Alu -16 293 1 694 232 36 27 chr2 102042184 102042374 -151214209 + MIR SINE MIR 47 237 -25 646 308 97 68 chr2 102042423 102043145 -151213438 - L2 LINE L2 -20 3252 2509 4115 145 65 30 chr2 102043145 102043903 -151212680 - LTR1 LTR ERV1 0 785 2 646 308 97 68 chr2 102043903 102044155 -151212428 - L2 LINE L2 -763 2509 2266 2177 81 0 10 chr2 102044964 102045261 -151211322 + AluSc SINE Alu 1 294 -15 6915 193 47 54 chr2 102045348 102047060 -151209523 + L1M4 LINE L1 11 1709 -4833 415 191 0 19 chr2 102047506 102047611 -151208972 + CT-rich Low_complexity Low_complexity 2 104 0 405 152 29 29 chr2 102047803 102047908 -151208675 + CT-rich Low_complexity Low_complexity 3 107 0 881 158 30 18 chr2 102050031 102050195 -151206388 + MER5B DNA MER1_type 12 177 -1 643 206 73 24 chr2 102050359 102050524 -151206059 + MER63A DNA MER1_type 1 173 -37 764 146 36 21 chr2 102050990 102051325 -151205258 + CT-rich Low_complexity Low_complexity 1 340 0 209 161 0 0 chr2 102051337 102051368 -151205215 + polypyrimidine Low_complexity Low_complexity 4 34 0 655 148 28 23 chr2 102051370 102051546 -151205037 + CT-rich Low_complexity Low_complexity 4 180 0 1860 146 17 0 chr2 102051549 102051851 -151204732 - AluSx SINE Alu -5 307 1 302 250 0 112 chr2 102051919 102052035 -151204548 - MIR SINE MIR -70 138 36 316 71 0 0 chr2 102052169 102052211 -151204372 - MADE1 DNA Mariner 0 80 39 539 231 22 45 chr2 102053145 102053279 -151203304 - MER5A DNA MER1_type -55 134 4 2105 96 41 0 chr2 102053997 102054288 -151202295 + AluSx SINE Alu 1 303 -9 189 0 0 0 chr2 102054692 102054713 -151201870 + (T)n Simple_repeat Simple_repeat 1 21 0 251 284 27 14 chr2 102055154 102055228 -151201355 - L2 LINE L2 -1 3271 3197 343 362 184 0 chr2 102055232 102055417 -151201166 + MIR SINE MIR 35 253 -9 253 338 40 68 chr2 102055509 102055657 -151200926 - MIR3 SINE MIR -61 147 4 243 204 19 0 chr2 102055815 102055869 -151200714 + L2 LINE L2 69 123 -3191 392 251 76 70 chr2 102055870 102056041 -151200542 + L2 LINE L2 1135 1306 -2008 4796 291 131 32 chr2 102056060 102058840 -151197743 + L2 LINE L2 189 3257 -56 213 94 0 0 chr2 102059128 102059160 -151197423 + (TCTCCC)n Simple_repeat Simple_repeat 3 34 0 372 22 0 0 chr2 102059160 102059205 -151197378 + (TG)n Simple_repeat Simple_repeat 2 46 0 2795 168 19 2 chr2 102059708 102060221 -151196362 - L1MA5 LINE L1 0 6300 5779 4249 229 82 60 chr2 102060493 102060628 -151195955 - L1MEc LINE L1 -3144 3071 2940 1755 104 39 4 chr2 102060628 102060888 -151195695 + AluSg SINE Alu 1 269 -41 4249 229 82 60 chr2 102060888 102063508 -151193075 - L1MEc LINE L1 -3275 2940 304 2861 66 98 0 chr2 102063840 102064248 -151192335 - LTR7 LTR ERV1 -2 448 1 224 377 6 6 chr2 102065006 102065125 -151191458 + MIR SINE MIR 26 144 -64 2335 55 24 0 chr2 102065211 102065500 -151191083 - AluY SINE Alu -15 296 1 223 188 31 31 chr2 102065704 102065768 -151190815 + (CATATA)n Simple_repeat Simple_repeat 2 65 0 694 190 0 0 chr2 102066779 102066895 -151189688 + FLAM_A SINE Alu 1 116 -17 3186 107 25 17 chr2 102067498 102068020 -151188563 + L1MA7 LINE L1 5765 6290 -1 2484 210 76 62 chr2 102068446 102070429 -151186154 - L1MD3 LINE L1 -10 7985 6032 2292 70 0 3 chr2 102070429 102070714 -151185869 + AluY SINE Alu 13 296 -15 2484 210 76 62 chr2 102070714 102070960 -151185623 - L1MD3 LINE L1 -1963 6032 5791 1831 229 85 12 chr2 102070960 102071444 -151185139 - LTR40a LTR ERVL 0 519 1 2484 210 76 62 chr2 102071444 102071873 -151184710 - L1MD3 LINE L1 -2204 5791 5370 2216 106 0 3 chr2 102071873 102072174 -151184409 + AluY SINE Alu 1 300 -11 2484 210 76 62 chr2 102072174 102072845 -151183738 - L1MD3 LINE L1 -2625 5370 4545 3067 242 87 44 chr2 102072873 102074296 -151182287 - L1MD3 LINE L1 -1744 4402 2918 1997 276 27 18 chr2 102074284 102074434 -151182149 - L1MDa LINE L1 -1043 5497 5350 * 2126 96 0 7 chr2 102074434 102074743 -151181840 - AluSc SINE Alu 0 307 1 1997 276 27 18 chr2 102074743 102075439 -151181144 - L1MDa LINE L1 -1190 5350 4642 1208 200 76 48 chr2 102075444 102075774 -151180809 - MER2 DNA MER2_type -6 339 1 4628 233 56 31 chr2 102075782 102076440 -151180143 - L1MDa LINE L1 -1904 4636 3996 1993 132 3 3 chr2 102076440 102076736 -151179847 + AluSx SINE Alu 1 296 -16 4628 233 56 31 chr2 102076736 102077732 -151178851 - L1MDa LINE L1 -2544 3996 2941 3222 216 56 41 chr2 102079595 102080878 -151175705 - L1MDa LINE L1 -3619 2921 1615 2290 82 0 0 chr2 102080878 102081190 -151175393 - AluY SINE Alu 0 314 3 3222 216 56 41 chr2 102081190 102081331 -151175252 - L1MDa LINE L1 -4925 1615 1478 731 238 26 9 chr2 102081330 102081561 -151175022 - L1MDa LINE L1 -5378 1165 931 * 255 331 71 64 chr2 102081863 102082144 -151174439 + L2 LINE L2 2985 3267 -5 555 280 46 50 chr2 102082408 102082847 -151173736 + LTR67 LTR ERVL 121 557 0 23 0 0 0 chr2 102084408 102084431 -151172152 + AT_rich Low_complexity Low_complexity 1 23 0 216 284 82 104 chr2 102084484 102084850 -151171733 - L2 LINE L2 -38 3234 2877 2056 161 0 0 chr2 102085519 102085829 -151170754 + AluJo SINE Alu 1 310 -2 659 293 98 17 chr2 102086230 102086589 -151169994 - L1MC4a LINE L1 -1894 5914 5527 2218 98 7 3 chr2 102086770 102087077 -151169506 + AluY SINE Alu 1 308 -3 2321 84 3 0 chr2 102087128 102087424 -151169159 - AluY SINE Alu -14 297 1 2155 134 3 7 chr2 102138651 102138957 -151117626 - AluSx SINE Alu -7 305 1 425 296 88 6 chr2 102139977 102140136 -151116447 - MIR3 SINE MIR -24 184 13 517 219 47 43 chr2 102141247 102141756 -151114827 - L1MB7 LINE L1 -3 6417 5800 * 3973 201 31 52 chr2 102141754 102142981 -151113602 - L1MB7 LINE L1 -1282 5100 3900 304 154 13 13 chr2 102143619 102143697 -151112886 + MER5C DNA MER1_type 205 282 -42 743 272 59 48 chr2 102144031 102144575 -151112008 - L1ME LINE L1 -5056 1014 465 264 356 18 12 chr2 102144642 102144805 -151111778 - L1ME LINE L1 -5573 497 334 203 224 20 0 chr2 102145414 102145463 -151111120 + (TA)n Simple_repeat Simple_repeat 2 51 0 633 251 40 20 chr2 102145540 102145739 -151110844 - HAL1 LINE L1 -791 1716 1514 2216 128 125 8 chr2 102146267 102146650 -151109933 - MSTA LTR MaLR 0 428 1 872 329 50 19 chr2 102147072 102147494 -151109089 - L2 LINE L2 -5 3308 2874 333 315 105 62 chr2 102147512 102147886 -151108697 - L2 LINE L2 -226 3046 2648 336 385 22 6 chr2 102147915 102148094 -151108489 - L2 LINE L2 -908 2406 2225 1818 109 60 39 chr2 102148180 102148465 -151108118 + AluSx SINE Alu 1 291 -21 30 27 0 0 chr2 102148528 102148565 -151108018 + AT_rich Low_complexity Low_complexity 1 37 0 2278 117 3 0 chr2 102148901 102149209 -151107374 + AluSx SINE Alu 1 309 -3 941 232 32 4 chr2 102149519 102149765 -151106818 - L1MB7 LINE L1 -4765 1619 1367 10874 203 46 14 chr2 102149767 102152770 -151103813 - L1M3 LINE L1 -654 5581 2482 380 90 75 0 chr2 102152768 102152835 -151103748 - L1 LINE L1 -1577 4569 4498 * 13434 21 0 1 chr2 102152883 102155230 -151101353 - L1PA3 LINE L1 -1 6154 3813 7907 35 0 0 chr2 102155230 102156245 -151100338 + L1P LINE L1 2837 3851 -2295 1142 186 18 4 chr2 102156251 102156525 -151100058 - L1M3 LINE L1 -4746 1395 1118 444 265 12 93 chr2 102156875 102157132 -151099451 - L1M3 LINE L1 -5007 1134 899 482 328 52 47 chr2 102157316 102157679 -151098904 - L1M3 LINE L1 -5526 605 241 215 140 20 0 chr2 102158469 102158519 -151098064 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 728 240 95 35 chr2 102158968 102159168 -151097415 + MIR SINE MIR 3 214 -48 463 279 77 14 chr2 102159432 102159654 -151096929 - L1ME LINE L1 -308 5813 5578 478 108 24 0 chr2 102159704 102159787 -151096796 + MSTD LTR MaLR 8 92 -304 3217 166 104 25 chr2 102159819 102160577 -151096006 - MER21B LTR ERV1 -31 832 15 1103 231 59 0 chr2 102160635 102160925 -151095658 + MSTD LTR MaLR 88 394 -2 188 163 23 0 chr2 102161113 102161156 -151095427 + T-rich Low_complexity Low_complexity 4 47 0 334 263 42 11 chr2 102161466 102161561 -151095022 - L2 LINE L2 -1 3312 3215 197 324 46 46 chr2 102162082 102162190 -151094393 + L2 LINE L2 3164 3271 -1 186 312 57 57 chr2 102162355 102162602 -151093981 - L2 LINE L2 -395 2919 2673 359 269 165 36 chr2 102162815 102163064 -151093519 + L2 LINE L2 3032 3312 -1 378 315 68 25 chr2 102163076 102163246 -151093337 - L2 LINE L2 -912 2402 2227 243 309 106 11 chr2 102163323 102163417 -151093166 - MIR SINE MIR -128 134 32 350 366 38 5 chr2 102163573 102163786 -151092797 - L2 LINE L2 -1357 1957 1738 2025 209 162 65 chr2 102165984 102166737 -151089846 - LTR1B LTR ERV1 0 826 1 602 294 86 11 chr2 102167360 102167724 -151088859 - LTR33 LTR ERVL -9 512 37 1921 236 65 42 chr2 102169940 102170605 -151085978 - L1MC4 LINE L1 0 8042 7363 180 0 0 0 chr2 102170630 102170650 -151085933 + (CA)n Simple_repeat Simple_repeat 1 20 0 240 35 0 0 chr2 102170650 102170679 -151085904 + (A)n Simple_repeat Simple_repeat 1 29 0 259 314 78 33 chr2 102171246 102171399 -151085184 + MIR SINE MIR 53 212 -50 277 277 15 0 chr2 102172512 102172577 -151084006 - MER58B DNA MER1_type -24 317 252 45 34 0 0 chr2 102173315 102173374 -151083209 + AT_rich Low_complexity Low_complexity 1 59 0 528 104 13 0 chr2 102173391 102173468 -151083115 + MADE1 DNA Mariner 1 78 -2 2260 102 0 0 chr2 102173523 102173827 -151082756 - AluSq SINE Alu -9 304 1 717 150 0 0 chr2 102174819 102174952 -151081631 + (CTATT)n Simple_repeat Simple_repeat 3 135 0 4077 112 13 58 chr2 102175059 102175729 -151080854 - MER51C LTR ERV1 0 640 1 649 317 81 28 chr2 102176065 102176387 -151080196 - L3 LINE CR1 -215 1362 1024 223 82 0 41 chr2 102176961 102177010 -151079573 + (TCC)n Simple_repeat Simple_repeat 2 48 0 2377 71 7 0 chr2 102177454 102177763 -151078820 + AluY SINE Alu 1 311 0 377 238 26 132 chr2 102177794 102177983 -151078600 + MIR SINE MIR 65 233 -29 354 239 141 24 chr2 102178152 102178407 -151078176 - L1M4 LINE L1 -832 5314 5030 269 290 287 22 chr2 102178560 102178877 -151077706 + L2 LINE L2 2871 3271 -1 674 254 115 9 chr2 102178988 102179205 -151077378 - MIR SINE MIR -14 248 9 324 0 0 0 chr2 102179867 102179903 -151076680 + (TG)n Simple_repeat Simple_repeat 2 37 0 247 226 71 24 chr2 102181721 102181805 -151074778 + MER5B DNA MER1_type 88 175 -3 208 242 167 0 chr2 102181805 102181870 -151074713 + MIR SINE MIR 12 87 -175 461 278 53 43 chr2 102181974 102182183 -151074400 + L2 LINE L2 2286 2496 -818 227 288 136 84 chr2 102182389 102182830 -151073753 + L2 LINE L2 2809 3272 0 4986 49 0 0 chr2 102183572 102184163 -151072420 - LTR10C LTR ERV1 0 591 1 21 0 0 0 chr2 102184260 102184281 -151072302 + AT_rich Low_complexity Low_complexity 1 21 0 2079 118 13 0 chr2 102185337 102185643 -151070940 + AluSx SINE Alu 3 312 0 23 0 0 0 chr2 102185663 102185686 -151070897 + AT_rich Low_complexity Low_complexity 1 23 0 247 320 25 59 chr2 102187165 102187368 -151069215 - MARNA DNA Mariner -59 527 332 442 289 88 42 chr2 102187514 102187774 -151068809 - MARNA DNA Mariner -300 286 15 3235 226 44 21 chr2 102190373 102191183 -151065400 + L1MC/D LINE L1 37 865 -5531 1589 87 0 23 chr2 102191186 102191404 -151065179 + AluSx SINE Alu 1 213 -99 180 111 0 0 chr2 102191429 102191456 -151065127 + (A)n Simple_repeat Simple_repeat 1 27 0 354 229 18 28 chr2 102191481 102191590 -151064993 + L1MC/D LINE L1 1768 1875 -4521 189 107 0 0 chr2 102191763 102191791 -151064792 + (TAA)n Simple_repeat Simple_repeat 2 29 0 371 254 73 9 chr2 102191962 102192072 -151064511 + L3 LINE CR1 1450 1566 -11 575 288 124 23 chr2 102192151 102192408 -151064175 + L1MC/D LINE L1 4198 4480 -1735 1066 186 88 0 chr2 102192409 102192635 -151063948 + MER82 DNA MER2_type 1 246 -407 558 207 23 37 chr2 102192635 102192761 -151063822 + MER82 DNA MER2_type 433 601 -52 2249 114 83 41 chr2 102192761 102192806 -151063777 + MSTA LTR MaLR 1 43 -385 1866 148 3 16 chr2 102192806 102193111 -151063472 + AluSx SINE Alu 1 301 -11 2249 114 83 41 chr2 102193111 102193476 -151063107 + MSTA LTR MaLR 43 428 0 558 207 23 37 chr2 102193476 102193529 -151063054 + MER82 DNA MER2_type 601 653 0 325 311 104 0 chr2 102193529 102193664 -151062919 + L1MC/D LINE L1 4480 4628 -1587 1982 92 17 14 chr2 102193767 102194061 -151062522 + L1PA13 LINE L1 5865 6159 -4 242 125 21 0 chr2 102194128 102194176 -151062407 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 934 225 11 6 chr2 102194177 102194355 -151062228 + MER8 DNA MER2_type 1 179 -60 355 226 0 0 chr2 102194331 102194393 -151062190 + MER2 DNA MER2_type 283 344 -1 * 585 212 119 27 chr2 102194444 102194921 -151061662 + L1MC/D LINE L1 4972 5504 -743 1658 191 0 0 chr2 102194923 102195202 -151061381 + AluSx SINE Alu 1 282 -30 327 25 0 0 chr2 102195202 102195242 -151061341 + (CA)n Simple_repeat Simple_repeat 1 40 0 1658 191 0 0 chr2 102195242 102195256 -151061327 + AluSx SINE Alu 281 294 -18 2642 105 6 0 chr2 102195337 102195698 -151060885 + THE1B LTR MaLR 2 364 0 9560 125 79 3 chr2 102195698 102197166 -151059417 + THE1B-int LTR MaLR 1 1580 0 2361 85 7 0 chr2 102197166 102197471 -151059112 + THE1B LTR MaLR 1 307 -57 834 272 103 75 chr2 102197473 102199178 -151057405 + L1ME LINE L1 58 1466 -4614 2122 259 113 40 chr2 102199252 102199494 -151057089 + L1ME LINE L1 179 402 -5678 1763 184 0 0 chr2 102199494 102199788 -151056795 - AluSx SINE Alu -18 294 1 2122 259 113 40 chr2 102199788 102200896 -151055687 + L1ME LINE L1 402 1579 -4501 990 248 95 25 chr2 102201090 102201804 -151054779 + L1ME LINE L1 2466 3503 -2577 1877 148 14 0 chr2 102201804 102202101 -151054482 + AluJo SINE Alu 1 301 -11 990 248 95 25 chr2 102202101 102202151 -151054432 + L1ME LINE L1 3503 3548 -2532 697 196 173 6 chr2 102202151 102202319 -151054264 + MLT1D LTR MaLR 266 461 -44 1860 152 7 0 chr2 102202338 102202647 -151053936 + AluJb SINE Alu 1 311 -1 596 243 229 15 chr2 102202663 102203000 -151053583 + L1ME LINE L1 3533 3941 -2139 2129 195 62 47 chr2 102203001 102203535 -151053048 + LTR55 LTR ERV 2 543 -5 4133 228 58 22 chr2 102203535 102204924 -151051659 + L1ME LINE L1 3931 5354 -744 939 241 24 61 chr2 102204943 102205238 -151051345 + MLT2C1 LTR ERVL 11 294 -103 345 160 106 0 chr2 102206113 102206207 -151050376 - L1MB2 LINE L1 0 6171 6068 1393 66 0 10 chr2 102206220 102206416 -151050167 - AluY SINE Alu 0 311 118 285 351 52 15 chr2 102206700 102206834 -151049749 - MER5A DNA MER1_type 0 189 51 280 287 115 0 chr2 102207056 102207143 -151049440 + MIR SINE MIR 158 254 -8 384 89 0 0 chr2 102208677 102208733 -151047850 + L1PA5 LINE L1 6098 6153 -1 25 0 0 0 chr2 102208733 102208758 -151047825 + AT_rich Low_complexity Low_complexity 1 25 0 238 311 44 22 chr2 102208828 102208918 -151047665 + MIR SINE MIR 171 262 0 278 286 0 0 chr2 102209594 102209671 -151046912 + A-rich Low_complexity Low_complexity 1 77 0 189 147 0 0 chr2 102209674 102209708 -151046875 + (GGAA)n Simple_repeat Simple_repeat 1 34 0 1059 276 126 11 chr2 102210449 102210830 -151045753 - L2 LINE L2 -7 3306 2882 631 273 5 21 chr2 102210834 102211021 -151045562 - L2 LINE L2 -655 2659 2476 807 102 8 0 chr2 102211023 102211150 -151045433 + AluSp/q SINE Alu 184 311 -2 276 227 0 53 chr2 102211150 102211225 -151045358 - L2 LINE L2 -831 2483 2413 2410 230 40 31 chr2 102211461 102212347 -151044236 - L1ME2 LINE L1 -12 6152 5171 1693 184 12 92 chr2 102212335 102212497 -151044086 - L1MC4 LINE L1 -2 8040 7867 * 243 61 0 0 chr2 102212497 102212530 -151044053 + (CA)n Simple_repeat Simple_repeat 1 33 0 2289 88 0 10 chr2 102212533 102212839 -151043744 - AluSg SINE Alu -7 303 1 1693 184 12 92 chr2 102212839 102213161 -151043422 - L1MC4 LINE L1 -177 7865 7591 428 117 13 0 chr2 102213175 102213252 -151043331 + (TCCA)n Simple_repeat Simple_repeat 3 80 0 313 200 0 0 chr2 102213265 102213325 -151043258 - L1MC4 LINE L1 -457 7585 7526 * 3106 218 73 26 chr2 102213323 102213893 -151042690 - L1ME2 LINE L1 -944 5202 4661 1973 103 0 4 chr2 102213893 102214165 -151042418 + AluY SINE Alu 21 291 -20 3106 218 73 26 chr2 102214165 102214641 -151041942 - L1ME2 LINE L1 -1485 4661 4106 327 241 87 102 chr2 102214710 102214976 -151041607 - LTR41 LTR ERVL -1 772 511 582 262 71 6 chr2 102215409 102215577 -151041006 - LTR41 LTR ERVL -592 181 3 2416 85 0 22 chr2 102215824 102216142 -151040441 + AluY SINE Alu 1 311 0 325 293 121 5 chr2 102216322 102216537 -151040046 + L1P5 LINE L1 5270 5445 -706 385 305 73 20 chr2 102216601 102216752 -151039831 + L1ME3A LINE L1 5603 5761 -360 21 0 0 0 chr2 102216904 102216925 -151039658 + AT_rich Low_complexity Low_complexity 1 21 0 1909 148 13 26 chr2 102217018 102217322 -151039261 - AluJo SINE Alu -12 300 1 719 283 103 74 chr2 102217357 102217909 -151038674 - L3 LINE CR1 -458 1119 552 233 278 48 8 chr2 102219165 102219291 -151037292 + L1ME3A LINE L1 5810 5940 -230 380 364 0 0 chr2 102220273 102220416 -151036167 + L3b LINE CR1 1261 1403 -180 186 43 0 0 chr2 102221422 102221445 -151035138 + (TG)n Simple_repeat Simple_repeat 2 24 0 322 330 81 81 chr2 102224103 102224388 -151032195 - L2 LINE L2 -82 3190 2906 272 176 255 20 chr2 102224477 102224579 -151032004 - MLT1J2 LTR MaLR -322 128 3 183 368 80 24 chr2 102224675 102224800 -151031783 - L2 LINE L2 -497 2817 2686 180 304 52 61 chr2 102224978 102225093 -151031490 + L2 LINE L2 3159 3272 0 657 266 46 52 chr2 102225430 102225675 -151030908 + MIR SINE MIR 25 262 0 708 175 6 56 chr2 102226551 102226587 -151029996 + MIR SINE MIR 111 147 -115 2415 92 63 20 chr2 102226587 102226936 -151029647 + THE1B LTR MaLR 1 364 0 708 175 6 56 chr2 102226936 102227059 -151029524 + MIR SINE MIR 147 262 0 3449 146 16 49 chr2 102227177 102227855 -151028728 - L1MB8 LINE L1 -16 6162 5507 1297 158 302 2 chr2 102227867 102228227 -151028356 + MLT2B2 LTR ERVL 5 477 -43 1152 182 5 9 chr2 102228227 102228441 -151028142 - Tigger2 DNA MER2_type 0 2718 2506 537 194 0 0 chr2 102228446 102228554 -151028029 - Tigger2 DNA MER2_type -2607 111 4 311 71 0 0 chr2 102228557 102228599 -151027984 + MLT2B2 LTR ERVL 472 513 -7 515 206 0 19 chr2 102228822 102228928 -151027655 + MER2 DNA MER2_type 1 104 -241 287 77 0 0 chr2 102228928 102228967 -151027616 + MADE1 DNA Mariner 1 39 -41 2681 137 29 2 chr2 102228987 102229404 -151027179 - MSTA LTR MaLR 0 428 1 594 187 113 87 chr2 102229404 102229634 -151026949 + MER2 DNA MER2_type 110 345 0 258 200 14 0 chr2 102229634 102229704 -151026879 - L1MB8 LINE L1 -731 5447 5377 284 220 0 0 chr2 102229806 102229865 -151026718 + AluJ/monomer SINE Alu 244 302 0 299 261 36 9 chr2 102229865 102229976 -151026607 - L1MB8 LINE L1 -919 5227 5114 * 1084 260 19 3 chr2 102229974 102230293 -151026290 - L1MB8 LINE L1 -2098 4048 3725 22 70 0 0 chr2 102230601 102230644 -151025939 + AT_rich Low_complexity Low_complexity 1 43 0 198 268 0 28 chr2 102230865 102230936 -151025647 - MIR SINE MIR -117 91 23 293 326 0 16 chr2 102231959 102232088 -151024495 + MIR SINE MIR 135 261 -1 292 315 69 46 chr2 102232578 102232708 -151023875 + L2 LINE L2 3119 3251 -21 984 219 179 25 chr2 102233277 102233752 -151022831 + L1MC5 LINE L1 7017 7564 -397 333 238 48 0 chr2 102233932 102234016 -151022567 - Zaphod DNA AcHobo -2 4029 3942 416 305 90 9 chr2 102234037 102234260 -151022323 - LTR16C LTR ERVL -14 477 237 1465 261 71 50 chr2 102234534 102235129 -151021454 - MER115 DNA AcHobo -84 609 3 360 299 206 11 chr2 102235155 102235339 -151021244 + MIR SINE MIR 27 246 -16 469 273 41 0 chr2 102235560 102235681 -151020902 + L2 LINE L2 3145 3270 -2 413 292 42 12 chr2 102235851 102236019 -151020564 + MIR SINE MIR 90 262 0 352 0 20 20 chr2 102236051 102236100 -151020483 + (TTTTA)n Simple_repeat Simple_repeat 2 50 0 6681 111 18 11 chr2 102236101 102236755 -151019828 - L1PA10 LINE L1 -21 6462 5814 2541 70 0 10 chr2 102236755 102237067 -151019516 - AluY SINE Alu -2 309 1 6681 111 18 11 chr2 102237067 102237234 -151019349 - L1PA10 LINE L1 -669 5814 5650 2573 75 0 3 chr2 102237234 102237541 -151019042 - AluSq SINE Alu -7 306 1 6681 111 18 11 chr2 102237541 102238626 -151017957 - L1PA10 LINE L1 -833 5650 4536 739 111 0 0 chr2 102238627 102238735 -151017848 - L1PA10 LINE L1 -2049 4412 4305 226 167 0 0 chr2 102238748 102238790 -151017793 - L1PA10 LINE L1 -2144 4317 4276 6777 190 14 129 chr2 102238817 102239156 -151017427 - L1PA10 LINE L1 -3460 3001 2625 2164 127 0 0 chr2 102239156 102239467 -151017116 + AluSx SINE Alu 1 311 0 6777 190 14 129 chr2 102239467 102240104 -151016479 - L1PA10 LINE L1 -3836 2625 1916 890 115 0 0 chr2 102240104 102240226 -151016357 - AluSg/x SINE Alu -18 294 173 1227 130 0 0 chr2 102240229 102240390 -151016193 + AluSx SINE Alu 10 170 -142 6777 190 14 129 chr2 102240390 102242237 -151014346 - L1PA10 LINE L1 -4547 1914 46 2452 76 0 25 chr2 102242237 102242554 -151014029 - AluY SINE Alu -2 309 1 6777 190 14 129 chr2 102242554 102242594 -151013989 - L1PA10 LINE L1 -6415 46 3 2650 186 82 52 chr2 102243642 102244348 -151012235 - LTR8A LTR ERV1 0 727 1 487 238 16 0 chr2 102244387 102244509 -151012074 + MIR SINE MIR 91 214 -48 189 107 0 0 chr2 102244717 102244745 -151011838 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 240 244 143 8 chr2 102245268 102245387 -151011196 - MIR SINE MIR -40 222 88 218 248 44 124 chr2 102245458 102245571 -151011012 - L2 LINE L2 -3 3269 3166 304 346 9 9 chr2 102245678 102245785 -151010798 + MIR SINE MIR 26 132 -76 2017 147 23 7 chr2 102245879 102246185 -151010398 - AluSx SINE Alu -1 311 1 663 269 66 18 chr2 102247584 102247811 -151008772 + MIR SINE MIR 8 245 -17 222 343 77 41 chr2 102249445 102249614 -151006969 - MIR3 SINE MIR -4 204 30 346 291 0 16 chr2 102250002 102250139 -151006444 - MIR SINE MIR -73 135 18 402 290 103 48 chr2 102250614 102250904 -151005679 + L3 LINE CR1 431 736 -841 343 248 291 0 chr2 102250899 102251016 -151005567 + MIR SINE MIR 53 203 -59 * 224 311 28 38 chr2 102251156 102251262 -151005321 + L3 LINE CR1 822 926 -651 207 167 0 0 chr2 102255128 102255170 -151001413 + GA-rich Low_complexity Low_complexity 1 42 0 204 347 0 13 chr2 102256898 102256973 -150999610 + GA-rich Low_complexity Low_complexity 3 76 0 355 290 84 19 chr2 102258690 102258797 -150997786 + MIR3 SINE MIR 82 195 -13 2324 87 3 10 chr2 102258936 102259248 -150997335 - AluY SINE Alu -1 310 1 305 200 29 129 chr2 102260538 102260678 -150995905 - L1ME4a LINE L1 -90 6031 5906 1555 142 94 3 chr2 102260720 102261029 -150995554 - MSTA LTR MaLR 0 428 92 701 274 6 0 chr2 102261052 102261216 -150995367 + MIR SINE MIR 92 256 -6 1835 231 131 26 chr2 102261218 102261349 -150995234 + MLT1E2 LTR MaLR 1 117 -509 2581 84 49 0 chr2 102261349 102261696 -150994887 + THE1B LTR MaLR 1 364 0 1835 231 131 26 chr2 102261696 102262131 -150994452 + MLT1E2 LTR MaLR 117 626 0 193 311 189 9 chr2 102264266 102264372 -150992211 + MER5B DNA MER1_type 18 142 -36 2062 115 0 41 chr2 102265195 102265509 -150991074 - AluSx SINE Alu -11 301 1 394 331 24 0 chr2 102267208 102267335 -150989248 + MIR SINE MIR 20 149 -59 2209 132 0 3 chr2 102267338 102267672 -150988911 + AluSx SINE Alu 1 333 0 284 303 92 0 chr2 102267937 102268013 -150988570 + MER91A DNA MER1_type 114 196 0 1292 190 143 4 chr2 102268045 102268303 -150988280 + AluJo SINE Alu 1 294 -8 228 250 44 15 chr2 102268450 102268518 -150988065 - MIR SINE MIR -112 150 81 334 250 167 7 chr2 102269078 102269222 -150987361 + MER5A DNA MER1_type 17 183 -6 337 286 67 9 chr2 102269335 102269440 -150987143 + MER5B DNA MER1_type 55 165 -13 287 268 0 0 chr2 102269462 102269533 -150987050 - MER112 DNA MER1_type -12 248 178 462 217 77 28 chr2 102269537 102269680 -150986903 - L1MC5 LINE L1 -30 7931 7782 845 205 89 112 chr2 102269782 102270233 -150986350 + MER4C LTR ERV1 3 444 -21 2164 121 0 7 chr2 102270233 102270530 -150986053 - AluSx SINE Alu -17 295 1 845 205 89 112 chr2 102270530 102270552 -150986031 + MER4C LTR ERV1 444 465 0 22 80 0 0 chr2 102270579 102270629 -150985954 + AT_rich Low_complexity Low_complexity 1 50 0 544 203 51 51 chr2 102270701 102270859 -150985724 - MER112 DNA MER1_type -86 174 17 193 167 250 71 chr2 102272398 102272482 -150984101 + MIR SINE MIR 46 144 -118 366 168 21 21 chr2 102273478 102273573 -150983010 + CT-rich Low_complexity Low_complexity 4 98 0 4786 214 96 47 chr2 102273778 102274081 -150982502 + L1MD3 LINE L1 5475 5762 -2233 876 181 0 0 chr2 102274081 102274214 -150982369 + FLAM_A SINE Alu 1 133 0 4786 214 96 47 chr2 102274214 102275011 -150981572 + L1MD3 LINE L1 5762 6519 -1476 291 114 0 0 chr2 102275011 102275055 -150981528 + (TG)n Simple_repeat Simple_repeat 2 45 0 4786 214 96 47 chr2 102275055 102275295 -150981288 + L1MD3 LINE L1 6519 6746 -1249 402 21 0 0 chr2 102275295 102275342 -150981241 + (CA)n Simple_repeat Simple_repeat 2 48 0 4786 214 96 47 chr2 102275342 102275567 -150981016 + L1MD3 LINE L1 6746 7118 -877 550 246 14 7 chr2 102275693 102275831 -150980752 + MLT1D LTR MaLR 92 230 -275 1834 143 12 3 chr2 102276193 102276515 -150980068 - L1 LINE L1 -786 5360 5036 1415 199 127 14 chr2 102277210 102277571 -150979012 + L1MC1 LINE L1 5914 6315 -18 956 315 50 22 chr2 102277582 102278119 -150978464 + HAL1b LINE L1 62 613 -735 835 218 265 67 chr2 102278175 102278579 -150978004 + L1MC5 LINE L1 6629 7112 -849 838 187 0 0 chr2 102278580 102278714 -150977869 - FLAM_C SINE Alu -9 134 1 22596 122 16 57 chr2 102278815 102281818 -150974765 + L1M1 LINE L1 1 3126 -4439 1016 113 0 0 chr2 102281818 102281951 -150974632 + AluSq/x SINE Alu 1 133 -179 2148 123 0 3 chr2 102281954 102282255 -150974328 + AluSx SINE Alu 1 300 -12 22596 122 16 57 chr2 102282255 102282878 -150973705 + L1M1 LINE L1 3128 3609 -3956 2292 109 0 0 chr2 102282878 102283182 -150973401 + AluSx SINE Alu 1 304 -8 597 195 157 19 chr2 102283730 102283889 -150972694 + MER5A DNA MER1_type 9 189 0 209 125 0 25 chr2 102283968 102284008 -150972575 + (TA)n Simple_repeat Simple_repeat 2 40 0 1094 236 57 116 chr2 102284031 102284244 -150972339 + MER69 DNA AcHobo 338 562 -1964 2314 79 10 0 chr2 102284244 102284534 -150972049 - AluSp SINE Alu -20 293 1 1094 236 57 116 chr2 102284534 102284811 -150971772 + MER69 DNA AcHobo 562 799 -1727 1279 220 82 53 chr2 102284816 102285303 -150971280 + MER69 DNA AcHobo 2019 2519 -7 222 62 0 0 chr2 102285835 102285867 -150970716 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1805 130 0 53 chr2 102285869 102286168 -150970415 - AluJb SINE Alu -29 283 1 2267 81 30 0 chr2 102286206 102286501 -150970082 + AluSp SINE Alu 6 309 -4 351 289 48 10 chr2 102286916 102287020 -150969563 - MLT1J2 LTR MaLR -2 448 341 2062 123 27 0 chr2 102287530 102287823 -150968760 + AluSx SINE Alu 1 301 -11 416 246 14 87 chr2 102287976 102288114 -150968469 + MER91B DNA MER1_type 1 128 -62 4468 153 122 44 chr2 102288886 102289880 -150966703 + MER11C LTR ERVK 1 1071 0 1678 210 3 3 chr2 102289998 102290298 -150966285 - MLT1A1 LTR MaLR -61 304 5 2278 113 3 0 chr2 102290589 102290889 -150965694 + AluSq SINE Alu 1 301 -12 1963 149 0 3 chr2 102290903 102291192 -150965391 + AluSx SINE Alu 1 288 -24 979 192 6 0 chr2 102291205 102291372 -150965211 + AluSp SINE Alu 132 299 -14 828 184 0 13 chr2 102292478 102292630 -150963953 + L1PB4 LINE L1 6006 6155 -1 374 188 265 0 chr2 102292631 102292739 -150963844 + MLT1J2 LTR MaLR 288 377 -32 2527 127 28 14 chr2 102292755 102293110 -150963473 - THE1B LTR MaLR 0 364 5 1127 108 13 0 chr2 102293170 102293328 -150963255 + L1MA10 LINE L1 6174 6333 -1 510 198 192 6 chr2 102294610 102294763 -150961820 - MER5A DNA MER1_type 0 189 4 224 200 15 62 chr2 102294763 102294828 -150961755 + L2 LINE L2 3251 3312 -1 566 282 0 20 chr2 102294936 102295085 -150961498 - MER5B DNA MER1_type -32 146 1 219 274 77 120 chr2 102295107 102295381 -150961202 - L2 LINE L2 -30 3242 2981 977 293 103 14 chr2 102295596 102296023 -150960560 - LTR33A LTR ERVL 0 523 59 2860 80 97 7 chr2 102296666 102297077 -150959506 + LTR7 LTR ERV1 1 448 -2 1633 250 36 2 chr2 102297087 102297563 -150959020 + L1M4 LINE L1 1077 1568 -4974 1098 279 27 34 chr2 102297570 102297855 -150958728 + L1M4 LINE L1 1628 1911 -4735 2158 128 0 16 chr2 102297855 102298167 -150958416 + AluSx SINE Alu 1 307 -5 1098 279 27 34 chr2 102298167 102298290 -150958293 + L1M4 LINE L1 1911 2033 -4613 8805 223 31 42 chr2 102298291 102299263 -150957320 + L1M4 LINE L1 3317 4298 -2346 1665 181 0 23 chr2 102299263 102299562 -150957021 - AluJo SINE Alu -20 292 1 8805 223 31 42 chr2 102299562 102300166 -150956417 + L1M4 LINE L1 4298 4907 -1737 2126 147 3 0 chr2 102300166 102300472 -150956111 + AluSx SINE Alu 1 307 -5 8805 223 31 42 chr2 102300472 102300533 -150956050 + L1M4 LINE L1 4907 4967 -1677 1922 118 0 59 chr2 102300533 102300839 -150955744 + AluSx SINE Alu 1 288 -24 8805 223 31 42 chr2 102300839 102301808 -150954775 + L1M4 LINE L1 4967 5896 -748 5347 211 48 78 chr2 102301807 102302161 -150954422 - L1M4 LINE L1 -1247 5397 5034 * 1934 144 18 0 chr2 102302161 102302471 -150954112 + AluSx SINE Alu 1 315 0 5347 211 48 78 chr2 102302471 102303989 -150952594 - L1M4 LINE L1 -1610 5034 3579 343 97 16 16 chr2 102303989 102304051 -150952532 + (TTCC)n Simple_repeat Simple_repeat 2 63 0 1705 154 7 11 chr2 102304055 102304341 -150952242 - AluJb SINE Alu -4 308 24 898 201 0 0 chr2 102304401 102304570 -150952013 - FRAM SINE Alu -8 168 1 227 224 24 47 chr2 102304570 102304655 -150951928 - L1M4 LINE L1 -3106 3538 3456 1755 119 0 43 chr2 102304655 102305005 -150951578 + MER61B LTR ERV1 1 425 0 624 142 45 60 chr2 102305005 102305139 -150951444 + MER61B-int LTR ERV1 2 133 -5084 5277 106 8 58 chr2 102305203 102306092 -150950491 + MER61B-int LTR ERV1 364 1207 -4010 * 23490 93 28 14 chr2 102306061 102306153 -150950430 + MER61B-int LTR ERV1 1417 1506 -3711 3879 115 0 4 chr2 102306153 102306666 -150949917 - MER9 LTR ERVK 0 511 1 23490 93 28 14 chr2 102306666 102308374 -150948209 + MER61B-int LTR ERV1 1506 3189 -2028 2028 134 19 65 chr2 102308374 102308746 -150947837 - THE1A LTR MaLR 0 355 1 23490 93 28 14 chr2 102308746 102310383 -150946200 + MER61B-int LTR ERV1 3189 4947 -270 4341 151 54 36 chr2 102310386 102311347 -150945236 + MER11C LTR ERVK 1 1071 0 1872 99 0 50 chr2 102311351 102311379 -150945204 + MER61B-int LTR ERV1 4950 4978 -239 2308 118 0 6 chr2 102311379 102311693 -150944890 - AluSx SINE Alu 0 312 1 1872 99 0 50 chr2 102311693 102311946 -150944637 + MER61B-int LTR ERV1 4978 5217 0 1581 146 38 26 chr2 102311946 102312282 -150944301 + MER61B LTR ERV1 1 425 0 3514 239 74 51 chr2 102312283 102313099 -150943484 - L1M4 LINE L1 -3186 3458 2663 1558 210 3 11 chr2 102313099 102313385 -150943198 - AluJo SINE Alu -28 284 1 3514 239 74 51 chr2 102313385 102315294 -150941289 - L1M4 LINE L1 -3981 2663 662 911 137 16 104 chr2 102315311 102315494 -150941089 - FAM SINE Alu -9 40 1 1324 237 16 32 chr2 102315502 102315873 -150940710 - L1M4 LINE L1 -5937 605 241 1851 147 91 0 chr2 102315882 102316168 -150940415 - AluSx SINE Alu 0 312 1 2211 144 18 9 chr2 102316191 102316531 -150940052 + MER2 DNA MER2_type 2 344 0 1791 209 66 25 chr2 102316652 102317093 -150939490 - LTR2B LTR ERV1 0 490 32 949 213 6 11 chr2 102317142 102317316 -150939267 - MER5A DNA MER1_type -16 173 1 1420 181 30 114 chr2 102317390 102317898 -150938685 - MER4C LTR ERV1 0 465 1 31 44 0 0 chr2 102318107 102318152 -150938431 + AT_rich Low_complexity Low_complexity 1 45 0 2381 84 7 0 chr2 102318189 102318486 -150938097 + AluSp SINE Alu 2 300 -13 461 234 19 0 chr2 102318491 102318598 -150937985 + MER94 DNA DNA 6 114 -20 22 56 0 0 chr2 102318773 102318809 -150937774 + AT_rich Low_complexity Low_complexity 1 36 0 521 121 198 17 chr2 102318841 102318957 -150937626 - FRAM SINE Alu 0 176 40 21 36 0 0 chr2 102320110 102320138 -150936445 + GC_rich Low_complexity Low_complexity 1 28 0 34 79 0 0 chr2 102320152 102320228 -150936355 + GC_rich Low_complexity Low_complexity 1 76 0 4816 178 78 41 chr2 102322622 102322850 -150933733 - L1MC4 LINE L1 -4 8038 7820 2379 64 0 0 chr2 102322850 102323130 -150933453 + AluY SINE Alu 25 304 -7 2203 130 7 0 chr2 102323134 102323435 -150933148 + AluSx SINE Alu 1 303 -9 4816 178 78 41 chr2 102323435 102323770 -150932813 - L1MC4 LINE L1 -224 7818 7497 1312 200 45 17 chr2 102323770 102324060 -150932523 - AluJo SINE Alu -11 301 4 4816 178 78 41 chr2 102324060 102324769 -150931814 - L1MC4 LINE L1 -545 7497 6712 339 282 86 23 chr2 102324833 102325097 -150931486 - L1ME LINE L1 -611 5553 5276 625 234 41 29 chr2 102325576 102325747 -150930836 + MIR SINE MIR 77 249 -13 2145 116 3 26 chr2 102325821 102326131 -150930452 - AluSx SINE Alu -9 303 1 1065 168 17 0 chr2 102327333 102327512 -150929071 + MER5A DNA MER1_type 3 184 -5 248 282 127 0 chr2 102328395 102328505 -150928078 - MER112 DNA MER1_type -39 221 98 1878 99 0 0 chr2 102328943 102329176 -150927407 + AluSx SINE Alu 59 291 -21 234 206 98 49 chr2 102329502 102329604 -150926979 + MIR SINE MIR 120 226 -36 2019 152 3 0 chr2 102330117 102330419 -150926164 + AluJo SINE Alu 1 303 -9 1921 136 7 23 chr2 102331392 102331700 -150924883 - AluJo SINE Alu -9 303 1 598 174 0 35 chr2 102332357 102332472 -150924111 + FLAM_A SINE Alu 22 132 -10 1594 192 3 56 chr2 102332856 102333179 -150923404 - AluJo SINE Alu -6 306 1 1265 169 0 24 chr2 102333204 102333417 -150923166 + AluJo SINE Alu 87 294 -18 380 232 54 27 chr2 102334725 102334837 -150921746 + L2 LINE L2 3199 3313 0 303 28 0 0 chr2 102335161 102335197 -150921386 + (TG)n Simple_repeat Simple_repeat 2 37 0 2271 108 0 0 chr2 102337227 102337545 -150919038 + AluY SINE Alu 1 311 0 1794 171 23 13 chr2 102337572 102337881 -150918702 - AluJb SINE Alu 0 312 1 1990 118 40 13 chr2 102337898 102338202 -150918381 - AluSq SINE Alu -1 312 1 310 243 69 97 chr2 102340085 102340153 -150916430 - MIR SINE MIR -15 247 179 1379 200 133 47 chr2 102340153 102340618 -150915965 - MLT1D LTR MaLR 0 505 1 310 243 69 97 chr2 102340618 102340693 -150915890 - MIR SINE MIR -83 179 108 2296 105 0 0 chr2 102341087 102341406 -150915177 - AluSx SINE Alu 0 319 1 375 262 161 24 chr2 102341509 102341677 -150914906 - MIR SINE MIR -7 255 65 2197 138 23 51 chr2 102341979 102342408 -150914175 - MSTB1 LTR MaLR -2 430 14 189 0 0 0 chr2 102343295 102343316 -150913267 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 1436 226 3 14 chr2 102343316 102343599 -150912984 - AluJo SINE Alu -32 280 1 345 303 67 55 chr2 102344079 102344244 -150912339 - MER5B DNA MER1_type -6 172 6 2435 67 0 13 chr2 102344277 102344577 -150912006 + AluSg1 SINE Alu 1 296 -13 2240 103 0 3 chr2 102344581 102344892 -150911691 + AluSp SINE Alu 1 313 0 507 263 179 0 chr2 102345110 102345289 -150911294 + L2 LINE L2 1072 1282 -2032 2549 77 0 0 chr2 102345716 102346026 -150910557 - AluSg SINE Alu 0 310 1 200 213 16 0 chr2 102346204 102346265 -150910318 + (TG)n Simple_repeat Simple_repeat 1 62 0 360 230 22 59 chr2 102347807 102347942 -150908641 - MIR SINE MIR -63 145 16 281 237 29 35 chr2 102347999 102348172 -150908411 + (CAGTG)n Simple_repeat Simple_repeat 3 174 0 * 289 226 34 28 chr2 102348161 102348338 -150908245 + (TAGTG)n Simple_repeat Simple_repeat 1 178 0 * 425 177 34 40 chr2 102348237 102348412 -150908171 + (GAGTG)n Simple_repeat Simple_repeat 3 176 0 262 386 32 6 chr2 102350094 102350252 -150906331 - L2 LINE L2 -189 3083 2922 437 341 65 22 chr2 102352089 102352318 -150904265 - MIR SINE MIR 0 262 24 368 315 158 0 chr2 102354021 102354167 -150902416 - MER5A DNA MER1_type -8 181 13 445 298 40 20 chr2 102355332 102355483 -150901100 - MIR SINE MIR -15 247 94 619 239 0 0 chr2 102357065 102357182 -150899401 + FLAM_C SINE Alu 14 130 -13 1372 172 0 13 chr2 102357892 102358130 -150898453 + MER46A DNA MER2_type 2 236 0 1350 167 48 33 chr2 102362096 102362432 -150894151 - L1MC3 LINE L1 -7 7778 7438 860 167 0 0 chr2 102362460 102362592 -150893991 - FLAM_C SINE Alu -1 132 1 1638 140 29 55 chr2 102362596 102362668 -150893915 - L1MC3 LINE L1 -746 7039 6967 2441 163 60 5 chr2 102362668 102363103 -150893480 - MER65C LTR ERV1 0 461 3 1638 140 29 55 chr2 102363103 102363373 -150893210 - L1MC3 LINE L1 -818 6967 6706 441 0 0 0 chr2 102363996 102364045 -150892538 + (TG)n Simple_repeat Simple_repeat 2 50 0 381 299 72 40 chr2 102365049 102365300 -150891283 - L2 LINE L2 -682 2632 2374 413 156 39 13 chr2 102366880 102366957 -150889626 - Tigger5 DNA MER2_type 0 2323 2245 2024 138 3 0 chr2 102366957 102367240 -150889343 - AluSx SINE Alu -19 293 10 364 228 0 0 chr2 102367242 102367321 -150889262 + Tigger5 DNA MER2_type 2242 2320 -3 357 155 69 0 chr2 102367331 102367389 -150889194 - Tigger5 DNA MER2_type -2261 62 1 192 357 10 20 chr2 102367923 102368021 -150888562 - MIR SINE MIR -115 147 51 1395 150 119 4 chr2 102368475 102368735 -150887848 - AluJb SINE Alu 0 312 23 6306 186 91 30 chr2 102368933 102370357 -150886226 + L1M4b LINE L1 8 1519 -5340 296 122 20 0 chr2 102370348 102370397 -150886186 - L1 LINE L1 -1331 4815 4766 * 519 191 0 0 chr2 102370399 102370488 -150886095 + L1 LINE L1 4820 4908 -1238 4959 131 71 27 chr2 102370489 102371344 -150885239 - MER4D LTR ERV1 -10 893 1 2660 147 25 0 chr2 102371345 102371863 -150884720 + L1 LINE L1 4901 5429 -743 198 279 8 90 chr2 102371873 102371995 -150884588 + MIR SINE MIR 17 128 -80 3334 112 4 4 chr2 102372127 102372590 -150883993 + THE1-int LTR MaLR 702 1164 -416 1155 146 38 5 chr2 102372586 102372798 -150883785 - L1 LINE L1 -768 5378 5160 * 3323 69 0 2 chr2 102372798 102373205 -150883378 + THE1B-int LTR MaLR 1175 1580 0 1934 151 48 31 chr2 102373205 102373563 -150883020 + THE1B LTR MaLR 1 364 0 1793 191 48 11 chr2 102373694 102374070 -150882513 + MLT1B LTR MaLR 1 390 0 504 129 11 21 chr2 102374719 102374812 -150881771 - L1MC2 LINE L1 -1 6343 6252 2761 132 58 13 chr2 102375499 102375963 -150880620 - MER31A LTR ERV1 0 485 1 2017 88 0 82 chr2 102376086 102376404 -150880179 + AluSx SINE Alu 1 292 -20 190 379 32 40 chr2 102378614 102378738 -150877845 + L2 LINE L2 3107 3229 -43 224 282 126 22 chr2 102381342 102381521 -150875062 + MIR SINE MIR 9 203 -59 2103 106 58 36 chr2 102384267 102384597 -150871986 + MER1B DNA MER1_type 1 337 0 484 266 100 80 chr2 102384924 102385396 -150871187 - L2 LINE L2 -239 3074 2365 1099 186 165 49 chr2 102385486 102385813 -150870770 - MLT1A1 LTR MaLR 0 365 1 2018 78 4 7 chr2 102386125 102386394 -150870189 - AluSc SINE Alu -17 292 25 241 229 66 0 chr2 102386765 102386826 -150869757 - MIR SINE MIR -114 148 84 184 271 119 0 chr2 102387273 102387332 -150869251 - MIR SINE MIR -99 163 98 1639 196 81 16 chr2 102387462 102387834 -150868749 - MSTD LTR MaLR 0 396 1 321 89 0 0 chr2 102388512 102388557 -150868026 + (CTCA)n Simple_repeat Simple_repeat 2 46 0 1819 184 19 125 chr2 102389346 102389694 -150866889 + MER21B LTR ERV1 1 276 -587 1616 162 16 30 chr2 102389694 102389997 -150866586 + AluJo SINE Alu 1 299 -13 1819 184 19 125 chr2 102389997 102390176 -150866407 + MER21B LTR ERV1 276 472 -391 221 246 15 15 chr2 102390480 102390545 -150866038 + (GGGTG)n Simple_repeat Simple_repeat 3 67 0 1407 244 195 10 chr2 102392064 102392691 -150863892 - L1ME2 LINE L1 -51 6113 5371 251 216 153 15 chr2 102392701 102392818 -150863765 - L1PA8A LINE L1 -363 5821 5693 24 53 0 0 chr2 102395805 102395843 -150860740 + AT_rich Low_complexity Low_complexity 1 38 0 183 353 72 20 chr2 102396159 102396312 -150860271 + MIR SINE MIR 62 222 -40 317 314 40 8 chr2 102396478 102396602 -150859981 + MIR SINE MIR 19 146 -62 1441 176 68 14 chr2 102396710 102397006 -150859577 + AluJo SINE Alu 1 312 0 2380 220 89 40 chr2 102397010 102397066 -150859517 + HAL1 LINE L1 916 968 -1539 2250 100 3 0 chr2 102397066 102397376 -150859207 + AluSx SINE Alu 1 311 -1 2380 220 89 40 chr2 102397376 102398164 -150858419 + HAL1 LINE L1 968 1801 -706 2468 64 0 0 chr2 102398443 102398754 -150857829 - AluY SINE Alu 0 311 1 24 32 0 0 chr2 102398816 102398847 -150857736 + AT_rich Low_complexity Low_complexity 1 31 0 696 293 33 5 chr2 102399035 102399297 -150857286 - L1MC4a LINE L1 -298 5823 5603 1894 215 209 13 chr2 102399856 102399944 -150856639 + L1ME2 LINE L1 5022 5092 -1072 2036 232 46 52 chr2 102399944 102400573 -150856010 - MLT1E2 LTR MaLR 0 626 2 1894 215 209 13 chr2 102400573 102400879 -150855704 + L1ME2 LINE L1 5092 5337 -827 185 0 40 0 chr2 102400879 102400904 -150855679 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1894 215 209 13 chr2 102400904 102401429 -150855154 + L1ME2 LINE L1 5337 6138 -26 7634 201 33 36 chr2 102401566 102401712 -150854871 + L1M4 LINE L1 17 162 -6484 2757 138 17 5 chr2 102401712 102402133 -150854450 - MSTB LTR MaLR 0 426 1 7634 201 33 36 chr2 102402133 102403856 -150852727 + L1M4 LINE L1 162 1880 -4766 2360 43 10 10 chr2 102403856 102404156 -150852427 + AluY SINE Alu 1 300 -11 7634 201 33 36 chr2 102404156 102404189 -150852394 + L1M4 LINE L1 1880 1912 -4734 1593 169 85 35 chr2 102404170 102404515 -150852068 + L1MB7 LINE L1 5743 6112 -72 * 2374 62 7 7 chr2 102404515 102404824 -150851759 + AluY SINE Alu 1 309 -2 1593 169 85 35 chr2 102404824 102404880 -150851703 + L1MB7 LINE L1 6112 6164 -20 267 322 98 30 chr2 102405615 102405851 -150850732 + L1MEd LINE L1 637 888 -5317 1743 188 9 26 chr2 102405886 102406232 -150850351 - MLT1A1 LTR MaLR 0 365 26 233 88 29 0 chr2 102406262 102406296 -150850287 - MLT1A1 LTR MaLR -339 35 1 460 283 48 42 chr2 102406302 102406468 -150850115 + L1MEd LINE L1 930 1096 -5109 443 310 130 6 chr2 102406581 102406920 -150849663 + L1MEd LINE L1 1374 1754 -4642 234 261 0 14 chr2 102407271 102407340 -150849243 + CT-rich Low_complexity Low_complexity 3 70 0 432 130 65 0 chr2 102407466 102407543 -150849040 - L1MB3 LINE L1 -7 6176 6095 1398 156 63 0 chr2 102407544 102407781 -150848802 - Tigger3(Golem) DNA MER2_type -7 3022 2771 682 172 8 16 chr2 102407778 102407900 -150848683 - Tigger3(Golem) DNA MER2_type -2887 142 22 * 237 288 41 119 chr2 102409260 102409503 -150847080 - L2 LINE L2 -15 3257 3034 480 241 62 0 chr2 102409505 102409617 -150846966 - MER5A DNA MER1_type -65 124 6 498 188 90 62 chr2 102411531 102411675 -150844908 + L2 LINE L2 3166 3313 0 255 283 43 11 chr2 102413637 102413729 -150842854 - MIR3 SINE MIR -15 193 99 2129 121 3 0 chr2 102414985 102415292 -150841291 - AluSx SINE Alu -4 308 1 2041 174 52 16 chr2 102415568 102415935 -150840648 - MSTD LTR MaLR 0 396 17 348 225 70 56 chr2 102416062 102416106 -150840477 - L1MC4 LINE L1 0 8042 8000 2460 54 0 0 chr2 102416106 102416403 -150840180 + AluY SINE Alu 1 297 -14 348 225 70 56 chr2 102416403 102416500 -150840083 - L1MC4 LINE L1 -42 8000 7899 23 0 0 0 chr2 102416500 102416523 -150840060 + AT_rich Low_complexity Low_complexity 1 23 0 1670 167 0 20 chr2 102416646 102416945 -150839638 - AluJo SINE Alu -19 293 1 262 264 190 12 chr2 102417150 102417313 -150839270 - L2 LINE L2 -248 3065 2874 23 54 0 0 chr2 102417346 102417383 -150839200 + AT_rich Low_complexity Low_complexity 1 37 0 278 262 228 9 chr2 102417617 102417850 -150838733 - HAL1 LINE L1 -196 2311 2028 1892 205 85 28 chr2 102417902 102417990 -150838593 - REP3 LTR ERV 0 562 480 1807 65 18 5 chr2 102417990 102418207 -150838376 - AluY SINE Alu -18 293 74 1892 205 85 28 chr2 102418207 102418625 -150837958 - REP3 LTR ERV -82 480 27 192 152 0 0 chr2 102419092 102419125 -150837458 + (CA)n Simple_repeat Simple_repeat 1 33 0 194 313 48 12 chr2 102420111 102420194 -150836389 - MER5A DNA MER1_type -100 89 4 1774 191 20 0 chr2 102426011 102426310 -150830273 - AluJo SINE Alu -7 305 1 187 275 163 0 chr2 102428174 102428254 -150828329 - MIR SINE MIR -83 125 33 228 170 0 0 chr2 102428598 102428651 -150827932 + (CA)n Simple_repeat Simple_repeat 1 53 0 224 314 57 57 chr2 102433268 102433443 -150823140 + MER5B DNA MER1_type 2 176 -2 982 242 23 0 chr2 102434987 102435206 -150821377 + MER58A DNA MER1_type 1 224 0 284 352 39 22 chr2 102436998 102437180 -150819403 - MIR3 SINE MIR -1 207 23 189 0 0 0 chr2 102438994 102439015 -150817568 + (T)n Simple_repeat Simple_repeat 1 21 0 428 240 91 9 chr2 102440029 102440222 -150816361 - L1MC/D LINE L1 -480 5641 5558 444 332 115 12 chr2 102441338 102441669 -150814914 - L2 LINE L2 -1 3271 2907 228 250 0 0 chr2 102441800 102441848 -150814735 + (TG)n Simple_repeat Simple_repeat 1 48 0 207 341 119 11 chr2 102442115 102442291 -150814292 - L2 LINE L2 -559 2755 2561 272 237 113 0 chr2 102444650 102444747 -150811836 - MIR SINE MIR -31 231 124 200 182 0 0 chr2 102445786 102445819 -150810764 + GA-rich Low_complexity Low_complexity 4 36 0 394 207 156 22 chr2 102445953 102446088 -150810495 - MER5B DNA MER1_type -20 158 6 402 369 0 0 chr2 102446209 102446350 -150810233 - MIR SINE MIR -13 249 109 2510 86 0 0 chr2 102449416 102449717 -150806866 + AluSx SINE Alu 1 301 -11 925 212 8 147 chr2 102450923 102451305 -150805278 - MER46C DNA MER2_type -2 336 8 21 36 0 0 chr2 102452220 102452248 -150804335 + GC_rich Low_complexity Low_complexity 1 28 0 2133 132 10 3 chr2 102454108 102454411 -150802172 - AluSx SINE Alu -7 305 1 320 340 43 0 chr2 102454422 102454516 -150802067 - L1ME LINE L1 -339 5782 5685 240 156 143 26 chr2 102454835 102454912 -150801671 + L1ME4a LINE L1 6025 6110 -11 728 211 62 0 chr2 102455379 102455540 -150801043 + MER63A DNA MER1_type 1 171 -39 318 272 87 98 chr2 102456363 102456639 -150799944 - HAL1 LINE L1 -1210 1297 1025 21 0 0 0 chr2 102463097 102463118 -150793465 + AT_rich Low_complexity Low_complexity 1 21 0 774 230 6 0 chr2 102465399 102465564 -150791019 + MIR SINE MIR 6 171 -91 246 197 76 0 chr2 102466435 102466501 -150790082 - L1P LINE L1 -1103 5043 4973 334 292 149 35 chr2 102468369 102468748 -150787835 + L2 LINE L2 1971 2390 -924 5442 18 8 4 chr2 102469456 102470470 -150786113 - L1PA2 LINE L1 -276 5879 4865 2641 14 0 0 chr2 102470470 102470752 -150785831 + L1PA2 LINE L1 5867 6149 -6 3608 178 92 43 chr2 102471310 102473050 -150783533 + L1MB2 LINE L1 4348 6168 -3 1400 169 95 16 chr2 102473080 102473656 -150782927 + L1MB7 LINE L1 4980 5509 -675 1825 115 66 10 chr2 102473656 102473944 -150782639 + AluJb SINE Alu 1 304 -8 1400 169 95 16 chr2 102473944 102474435 -150782148 + L1MB7 LINE L1 5509 6177 -7 363 295 133 52 chr2 102474889 102475272 -150781311 + MLT1K LTR MaLR 60 473 -115 1943 112 0 4 chr2 102476024 102476284 -150780299 + AluSg SINE Alu 1 259 -51 297 0 0 0 chr2 102476284 102476317 -150780266 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 1940 144 14 71 chr2 102476695 102477049 -150779534 + MER1B DNA MER1_type 3 336 -1 21 0 0 0 chr2 102477160 102477181 -150779402 + AT_rich Low_complexity Low_complexity 1 21 0 1986 128 28 3 chr2 102477436 102477726 -150778857 + AluSg SINE Alu 1 297 -13 2366 93 3 6 chr2 102478257 102478568 -150778015 + AluSx SINE Alu 1 310 -2 678 228 114 87 chr2 102480251 102480675 -150775908 + MLT1J LTR MaLR 38 511 0 196 109 0 188 chr2 102480779 102480843 -150775740 + MER5A DNA MER1_type 114 165 -24 387 287 52 52 chr2 102481948 102482122 -150774461 + L2 LINE L2 2914 3087 -185 264 365 56 8 chr2 102482208 102482334 -150774249 + L2 LINE L2 3134 3265 -7 251 196 65 0 chr2 102482400 102482446 -150774137 + MIR3 SINE MIR 119 167 -41 213 400 53 0 chr2 102483028 102483123 -150773460 + L2 LINE L2 3153 3252 -20 21 36 0 0 chr2 102483813 102483841 -150772742 + GC_rich Low_complexity Low_complexity 1 28 0 741 212 43 22 chr2 102483923 102484107 -150772476 - MER53 DNA DNA 0 189 2 284 203 136 0 chr2 102484454 102484513 -150772070 + MIR SINE MIR 8 74 -188 279 273 182 0 chr2 102485719 102485807 -150770776 + L2 LINE L2 3125 3228 -44 2615 100 44 89 chr2 102486192 102486643 -150769940 - MER4A LTR ERV1 -2 662 232 803 39 39 10 chr2 102486636 102486738 -150769845 - MER4A LTR ERV1 -551 113 9 * 2356 94 3 0 chr2 102487471 102487769 -150768814 - AluSx SINE Alu -13 299 1 1153 142 38 9 chr2 102487784 102487995 -150768588 - Tigger1 DNA MER2_type 0 2418 2202 811 158 12 55 chr2 102487984 102488148 -150768435 - Tigger1 DNA MER2_type -2261 157 1 * 1959 126 84 34 chr2 102488404 102488761 -150767822 - THE1C LTR MaLR 0 375 1 1944 288 121 34 chr2 102490185 102491229 -150765354 + L2 LINE L2 2073 3305 -8 704 227 128 0 chr2 102491673 102491862 -150764721 - MIR SINE MIR -14 248 34 24 0 0 0 chr2 102493179 102493203 -150763380 + AT_rich Low_complexity Low_complexity 1 24 0 2057 207 76 9 chr2 102496151 102496610 -150759973 - MLT1E2 LTR MaLR 0 626 137 345 160 96 64 chr2 102496648 102496742 -150759841 - MLT1E2 LTR MaLR -557 97 1 572 252 0 0 chr2 102497311 102497426 -150759157 + MER3 DNA MER1_type 1 115 -94 1038 160 6 0 chr2 102497932 102498107 -150758476 + FRAM SINE Alu 1 176 0 2400 62 7 0 chr2 102499188 102499478 -150757105 - AluY SINE Alu -17 294 3 28 29 0 0 chr2 102500299 102500334 -150756249 + AT_rich Low_complexity Low_complexity 1 35 0 234 307 80 0 chr2 102501070 102501158 -150755425 + L1ME4a LINE L1 5970 6064 -57 315 176 198 22 chr2 102501712 102501803 -150754780 - Cheshire DNA MER1_type -4 2416 2310 9979 194 51 30 chr2 102501903 102502605 -150753978 - Cheshire DNA MER1_type -158 2262 1576 2171 134 0 0 chr2 102502605 102502904 -150753679 - AluSx SINE Alu -11 301 3 9979 194 51 30 chr2 102502904 102504413 -150752170 - Cheshire DNA MER1_type -844 1576 5 417 265 4 4 chr2 102504837 102504957 -150751626 + L1MC/D LINE L1 5692 5811 -372 2094 120 0 7 chr2 102504992 102505292 -150751291 + AluSx SINE Alu 1 298 -14 271 297 151 9 chr2 102505375 102505607 -150750976 + L1ME3 LINE L1 5683 5947 -215 29 0 0 0 chr2 102505803 102505832 -150750751 + AT_rich Low_complexity Low_complexity 1 29 0 467 209 9 9 chr2 102506435 102506545 -150750038 - L1M4b LINE L1 -5788 1071 962 4374 115 47 47 chr2 102506559 102507073 -150749510 + LTR1 LTR ERV1 12 530 -255 1893 101 30 0 chr2 102507073 102507371 -150749212 + AluSg SINE Alu 6 311 0 4374 115 47 47 chr2 102507371 102507628 -150748955 + LTR1 LTR ERV1 529 785 0 2832 224 113 36 chr2 102507634 102507990 -150748593 - L1M4b LINE L1 -5915 944 617 186 43 0 0 chr2 102507990 102508013 -150748570 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 1855 135 0 19 chr2 102508021 102508288 -150748295 - AluSg SINE Alu -48 262 1 2832 224 113 36 chr2 102508288 102508799 -150747784 - L1M4b LINE L1 -6248 611 1 217 250 120 43 chr2 102509354 102509446 -150747137 - L2 LINE L2 -19 3253 3155 2095 97 14 0 chr2 102510942 102511261 -150745322 + AluSc SINE Alu 1 323 0 1636 126 5 0 chr2 102511300 102511523 -150745060 - AluSx SINE Alu -88 224 1 1734 169 3 23 chr2 102512258 102512597 -150743986 + AluJb SINE Alu 1 312 0 434 303 52 7 chr2 102512888 102513043 -150743540 + MIR SINE MIR 15 176 -86 614 217 141 0 chr2 102513138 102513322 -150743261 + L1MD1 LINE L1 6013 6222 -20 430 281 22 27 chr2 102513605 102513790 -150742793 - L1ME4a LINE L1 -217 5904 5721 348 299 68 27 chr2 102513911 102514058 -150742525 + MARNA DNA Mariner 114 266 -320 2035 127 13 7 chr2 102514231 102514531 -150742052 + AluSx SINE Alu 1 302 -10 2125 121 20 0 chr2 102515555 102515853 -150740730 + AluSx SINE Alu 1 304 -8 28 29 0 0 chr2 102516097 102516132 -150740451 + AT_rich Low_complexity Low_complexity 1 35 0 1050 111 0 0 chr2 102516466 102516601 -150739982 + AluSq/x SINE Alu 1 135 -177 2377 52 0 64 chr2 102516601 102516928 -150739655 + AluY SINE Alu 1 306 -5 2044 123 3 13 chr2 102516941 102517243 -150739340 + AluSc SINE Alu 1 299 -10 237 261 0 31 chr2 102517376 102517441 -150739142 + GA-rich Low_complexity Low_complexity 5 67 0 818 141 16 0 chr2 102518423 102518551 -150738032 - FLAM_C SINE Alu -13 130 1 2168 115 0 0 chr2 102519866 102520161 -150736422 - AluSq SINE Alu -18 295 1 508 227 81 6 chr2 102521447 102521619 -150734964 + L1MC5 LINE L1 6612 6796 -1165 1273 167 0 14 chr2 102521649 102521859 -150734724 + AluJo SINE Alu 1 207 -105 321 319 0 13 chr2 102521863 102522020 -150734563 + L1MC4 LINE L1 6914 7068 -974 601 184 0 0 chr2 102522028 102522137 -150734446 - L1PA16 LINE L1 -28 6138 6030 414 207 76 80 chr2 102522174 102522411 -150734172 + L1MC5 LINE L1 6991 7226 -735 2339 99 0 13 chr2 102522534 102522846 -150733737 - AluSx SINE Alu -4 308 1 2058 128 7 3 chr2 102523444 102523742 -150732841 + AluSx SINE Alu 1 299 -13 1076 161 18 63 chr2 102523742 102523965 -150732618 + AluJo SINE Alu 86 298 -14 1535 186 10 17 chr2 102523985 102524275 -150732308 + AluJo SINE Alu 10 297 -15 226 307 104 16 chr2 102524305 102524497 -150732086 + L1ME LINE L1 5725 5933 -188 311 246 112 37 chr2 102524606 102524740 -150731843 + L1M3d LINE L1 613 756 -5547 9035 222 58 51 chr2 102524964 102525896 -150730687 + L1M3d LINE L1 777 1702 -4680 2245 105 10 0 chr2 102525896 102526200 -150730383 + AluSx SINE Alu 1 307 -5 9035 222 58 51 chr2 102526200 102526220 -150730363 + L1M3d LINE L1 1702 1720 -4662 649 137 0 0 chr2 102526220 102526322 -150730261 + AluSg/x SINE Alu 208 309 0 9035 222 58 51 chr2 102526322 102527555 -150729028 + L1M3d LINE L1 1720 2944 -3438 2576 46 0 3 chr2 102527555 102527858 -150728725 - AluY SINE Alu -9 302 1 1588 161 35 35 chr2 102527863 102528149 -150728434 - AluJb SINE Alu -22 290 5 9035 222 58 51 chr2 102528149 102530134 -150726449 + L1M3d LINE L1 2947 4983 -1399 198 71 0 0 chr2 102530861 102530889 -150725694 + (CA)n Simple_repeat Simple_repeat 2 29 0 1046 193 33 5 chr2 102532157 102532369 -150724214 + MER20 DNA MER1_type 1 218 -1 219 293 206 14 chr2 102533831 102533978 -150722605 + MIR SINE MIR 32 205 -57 244 174 43 0 chr2 102534164 102534210 -150722373 - L2 LINE L2 0 3272 3225 2071 116 65 37 chr2 102534717 102535071 -150721512 + THE1B LTR MaLR 1 364 0 4813 160 42 4 chr2 102535274 102535620 -150720963 + L1M2 LINE L1 4304 4635 -1631 531 45 0 0 chr2 102535620 102535686 -150720897 + (CA)n Simple_repeat Simple_repeat 1 66 0 4813 160 42 4 chr2 102535686 102536514 -150720069 + L1M2 LINE L1 4635 5520 -746 257 350 71 33 chr2 102536581 102536821 -150719762 - L2 LINE L2 -56 3257 3009 408 298 217 0 chr2 102536960 102537121 -150719462 + L2 LINE L2 2527 2722 -592 1518 196 84 12 chr2 102537121 102537525 -150719058 + L1MD3 LINE L1 7552 7984 -11 197 250 0 0 chr2 102537708 102537752 -150718831 + L3b LINE CR1 1531 1574 -9 21 36 0 0 chr2 102538411 102538439 -150718144 + AT_rich Low_complexity Low_complexity 1 28 0 1333 234 76 10 chr2 102538760 102539153 -150717430 + L1MC4a LINE L1 7341 7759 -49 1904 147 23 13 chr2 102539153 102539453 -150717130 + AluSx SINE Alu 1 303 -9 206 283 19 57 chr2 102539460 102539566 -150717017 - MIR3 SINE MIR -26 182 81 629 300 233 20 chr2 102539659 102540364 -150716219 - L2 LINE L2 -18 3295 2426 2122 128 0 0 chr2 102540510 102540806 -150715777 + AluJb SINE Alu 1 296 -16 2480 82 48 22 chr2 102541015 102541370 -150715213 + THE1B LTR MaLR 1 364 0 11721 83 13 8 chr2 102541370 102541791 -150714792 + THE1B-int LTR MaLR 1 419 -1161 2215 88 7 0 chr2 102541791 102542116 -150714467 - AluSq SINE Alu 0 327 1 11721 83 13 8 chr2 102542116 102543266 -150713317 + THE1B-int LTR MaLR 419 1580 0 2298 86 50 36 chr2 102543266 102543625 -150712958 + THE1B LTR MaLR 1 364 0 655 276 101 55 chr2 102543829 102544177 -150712406 + MLT1I LTR MaLR 46 409 0 1638 302 53 63 chr2 102544791 102545735 -150710848 + L2 LINE L2 2043 2964 -308 1987 196 59 30 chr2 102545735 102546226 -150710357 + MLT1D LTR MaLR 1 505 0 1638 302 53 63 chr2 102546226 102546508 -150710075 + L2 LINE L2 2964 3247 -25 339 331 58 23 chr2 102546590 102546762 -150709821 - HAL1 LINE L1 -1120 1387 1210 227 222 206 0 chr2 102548014 102548077 -150708506 + L2 LINE L2 3189 3264 -8 459 157 12 0 chr2 102548481 102548564 -150708019 + MER51A LTR ERV1 470 553 -81 1739 147 16 39 chr2 102549644 102549951 -150706632 - AluJb SINE Alu -12 300 1 285 203 76 25 chr2 102550763 102550881 -150705702 + L1ME4a LINE L1 5766 5889 -232 2023 142 0 3 chr2 102551554 102551850 -150704733 - AluSx SINE Alu -17 295 1 198 0 0 0 chr2 102551899 102551921 -150704662 + (T)n Simple_repeat Simple_repeat 1 22 0 2377 83 3 3 chr2 102552046 102552348 -150704235 + AluY SINE Alu 1 302 -9 36 23 0 0 chr2 102552348 102552391 -150704192 + AT_rich Low_complexity Low_complexity 1 43 0 26 50 0 0 chr2 102552976 102553016 -150703567 + AT_rich Low_complexity Low_complexity 1 40 0 1840 142 6 54 chr2 102553128 102553222 -150703361 + AluJo SINE Alu 1 98 -214 2698 36 0 0 chr2 102553222 102553527 -150703056 + AluY SINE Alu 1 305 -6 1840 142 6 54 chr2 102553527 102553749 -150702834 + AluJo SINE Alu 98 302 -10 2251 109 0 10 chr2 102554138 102554441 -150702142 - AluSx SINE Alu -12 300 1 2499 62 3 0 chr2 102555069 102555378 -150701205 - AluY SINE Alu -1 310 1 3640 212 78 30 chr2 102555710 102555771 -150700812 + L1MC4 LINE L1 6768 6825 -1217 754 153 24 0 chr2 102555771 102555895 -150700688 + FLAM_C SINE Alu 1 127 -6 3640 212 78 30 chr2 102555895 102556238 -150700345 + L1MC4 LINE L1 6825 7150 -892 2451 82 3 0 chr2 102556238 102556544 -150700039 + AluSp SINE Alu 1 307 -6 3640 212 78 30 chr2 102556544 102556902 -150699681 + L1MC4 LINE L1 7150 7489 -553 2410 58 3 10 chr2 102556902 102557213 -150699370 + AluY SINE Alu 1 309 -2 3640 212 78 30 chr2 102557213 102557636 -150698947 + L1MC4 LINE L1 7489 8012 -30 348 133 53 67 chr2 102558690 102558765 -150697818 + MER116 DNA Mariner 3 76 -4 27 62 0 0 chr2 102558971 102559019 -150697564 + AT_rich Low_complexity Low_complexity 1 48 0 1790 165 7 13 chr2 102559052 102559355 -150697228 + AluJo SINE Alu 1 301 -11 777 207 55 6 chr2 102559803 102559967 -150696616 - MER5A DNA MER1_type 0 189 18 23 33 0 0 chr2 102560349 102560379 -150696204 + AT_rich Low_complexity Low_complexity 1 30 0 1894 114 4 25 chr2 102560627 102560907 -150695676 - AluSx SINE Alu -1 311 38 3177 191 26 29 chr2 102562194 102562424 -150694159 + Looper DNA T2_type 1 230 -1328 1791 264 56 44 chr2 102562424 102563010 -150693573 + MLT1E LTR MaLR 1 593 0 3177 191 26 29 chr2 102563010 102563542 -150693041 + Looper DNA T2_type 230 761 -797 2508 227 79 16 chr2 102563545 102563639 -150692944 + L1MDa LINE L1 16 103 -6437 1892 154 3 16 chr2 102563639 102563951 -150692632 + AluJb SINE Alu 1 308 -4 2508 227 79 16 chr2 102563951 102565111 -150691472 + L1MDa LINE L1 103 1522 -5018 1721 147 54 0 chr2 102565269 102565548 -150691035 + AluJb SINE Alu 1 294 -18 6258 123 51 24 chr2 102565548 102566204 -150690379 + Tigger3b DNA MER2_type 67 768 -2260 1840 155 3 34 chr2 102566204 102566501 -150690082 - AluJb SINE Alu -24 288 1 6258 123 51 24 chr2 102566501 102566978 -150689605 + Tigger3b DNA MER2_type 768 1231 0 2579 184 65 11 chr2 102566978 102567604 -150688979 + L1MDa LINE L1 1564 2223 -4317 783 207 149 11 chr2 102567606 102567794 -150688789 + AluJo SINE Alu 86 299 -13 1193 181 41 13 chr2 102567802 102568117 -150688466 + L1MDa LINE L1 2234 2557 -3983 263 93 23 0 chr2 102568146 102568189 -150688394 + (CCCCAG)n Simple_repeat Simple_repeat 1 44 0 1985 141 7 0 chr2 102568638 102568922 -150687661 + AluSx SINE Alu 1 286 -26 2108 118 3 3 chr2 102569129 102569433 -150687150 - AluSx SINE Alu -8 304 1 2042 137 0 13 chr2 102569972 102570279 -150686304 - AluSx SINE Alu -9 303 1 240 205 154 0 chr2 102571202 102571280 -150685303 + L1MDa LINE L1 2543 2632 -3908 1274 198 61 133 chr2 102571285 102571780 -150684803 + L1MD2 LINE L1 5784 6242 0 1592 220 79 16 chr2 102571791 102572223 -150684360 + Looper DNA T2_type 761 1219 -339 2008 136 0 27 chr2 102572223 102572524 -150684059 + AluSx SINE Alu 1 293 -19 22 0 0 0 chr2 102572524 102572546 -150684037 + AT_rich Low_complexity Low_complexity 1 22 0 2201 184 155 26 chr2 102573086 102573582 -150683001 - MER68 LTR ERV1 -2 560 1 2272 193 60 32 chr2 102573900 102574398 -150682185 + LTR64 LTR ERVK 1 512 -1 186 49 49 24 chr2 102574398 102574439 -150682144 + (TA)n Simple_repeat Simple_repeat 1 42 0 186 43 0 0 chr2 102574518 102574541 -150682042 + (TCTA)n Simple_repeat Simple_repeat 4 26 0 1142 153 80 40 chr2 102574547 102574705 -150681878 - Charlie1 DNA MER1_type -20 2741 2591 2402 90 0 0 chr2 102574705 102575004 -150681579 + AluSq SINE Alu 1 299 -14 1142 153 80 40 chr2 102575004 102575146 -150681437 - Charlie1 DNA MER1_type -170 2591 2429 473 221 173 0 chr2 102575154 102575258 -150681325 - Charlie1 DNA MER1_type -2638 123 2 186 231 0 0 chr2 102575996 102576035 -150680548 + MER5B DNA MER1_type 4 42 -136 441 318 56 21 chr2 102576061 102576294 -150680289 + L1M4b LINE L1 6 246 -6613 1347 239 90 60 chr2 102576935 102577589 -150678994 + L1M4b LINE L1 1228 1901 -4954 698 284 65 66 chr2 102577648 102578268 -150678315 + L2 LINE L2 2684 3313 0 868 168 0 0 chr2 102578367 102578498 -150678085 + AluJo SINE Alu 9 139 -173 289 93 0 93 chr2 102578502 102578556 -150678027 + AluJo SINE Alu 87 135 -167 1349 148 25 111 chr2 102578556 102578880 -150677703 + AluJo SINE Alu 1 296 -16 503 264 39 8 chr2 102579525 102579654 -150676929 - MER94 DNA DNA -1 133 1 2913 13 3 0 chr2 102579756 102580071 -150676512 + AluYb8 SINE Alu 1 316 -2 216 0 0 0 chr2 102580464 102580488 -150676095 + (TTTTTA)n Simple_repeat Simple_repeat 6 29 0 1804 94 4 4 chr2 102580488 102580723 -150675860 - AluSc SINE Alu -74 235 1 201 235 12 35 chr2 102580795 102580880 -150675703 + (CATATA)n Simple_repeat Simple_repeat 4 86 0 1899 140 11 0 chr2 102581028 102581307 -150675276 + AluSx SINE Alu 1 282 -30 22 0 0 0 chr2 102581380 102581402 -150675181 + AT_rich Low_complexity Low_complexity 1 22 0 923 78 16 0 chr2 102582232 102582360 -150674223 - FLAM_C SINE Alu -3 130 1 290 294 31 55 chr2 102583723 102583886 -150672697 + MIR SINE MIR 34 192 -70 276 214 54 71 chr2 102584810 102584922 -150671661 + L1MC5 LINE L1 6692 6801 -1160 1681 127 55 55 chr2 102585170 102585461 -150671122 - AluSx SINE Alu -19 293 3 765 198 148 0 chr2 102585961 102586143 -150670440 + MER3 DNA MER1_type 1 209 0 325 278 19 9 chr2 102586286 102586394 -150670189 + MER5B DNA MER1_type 8 116 -62 201 264 33 66 chr2 102587895 102587986 -150668597 - MIR SINE MIR -62 146 70 600 302 64 27 chr2 102588601 102588899 -150667684 + L1MC4 LINE L1 5443 5751 -2057 366 186 155 0 chr2 102588999 102589096 -150667487 + MIR SINE MIR 133 244 -18 2210 120 0 0 chr2 102589307 102589598 -150666985 + AluSg SINE Alu 1 291 -19 231 279 13 13 chr2 102589660 102589739 -150666844 - MIR SINE MIR -70 192 114 733 205 51 15 chr2 102589792 102589987 -150666596 - MIR SINE MIR -60 202 1 2154 119 0 3 chr2 102590253 102590556 -150666027 + AluSx SINE Alu 1 302 -10 2048 159 48 3 chr2 102591024 102591395 -150665188 - MLT1B LTR MaLR -2 388 1 189 255 171 71 chr2 102592355 102592736 -150663847 + L2 LINE L2 2086 2504 -810 3119 221 52 44 chr2 102592837 102593987 -150662596 - L1MDb LINE L1 -2649 3891 2714 703 246 61 33 chr2 102593984 102594315 -150662268 - L1MDb LINE L1 -5196 1334 991 * 276 323 25 50 chr2 102595131 102595329 -150661254 - L1MDb LINE L1 -6347 193 1 2821 177 13 8 chr2 102595826 102596352 -150660231 + L1MB1 LINE L1 5639 6167 -1 612 50 0 0 chr2 102598789 102598869 -150657714 - Alu SINE Alu -5 307 228 1221 251 43 75 chr2 102598985 102599831 -150656752 + L1MC4 LINE L1 6419 7181 -780 305 272 80 42 chr2 102599904 102600117 -150656466 + L1MC5 LINE L1 7313 7533 -428 2522 43 0 10 chr2 102600737 102601036 -150655547 + AluY SINE Alu 2 297 -14 293 283 57 18 chr2 102601730 102601878 -150654705 + MIR SINE MIR 38 188 -65 610 138 0 0 chr2 102602532 102602626 -150653957 + FRAM SINE Alu 77 170 -6 22 35 0 0 chr2 102603338 102603367 -150653216 + AT_rich Low_complexity Low_complexity 1 29 0 1244 192 62 5 chr2 102603507 102603731 -150652852 - AluJb SINE Alu -74 238 2 468 188 89 0 chr2 102604300 102604412 -150652171 + L1ME3A LINE L1 6035 6156 -14 1791 152 0 73 chr2 102604688 102605018 -150651565 + AluJb SINE Alu 1 306 -6 978 129 0 0 chr2 102605288 102605420 -150651163 + AluSq/x SINE Alu 1 132 -180 5080 191 60 60 chr2 102605420 102605901 -150650682 + L1MC4a LINE L1 5979 6459 -1349 2125 106 10 3 chr2 102605901 102606194 -150650389 - AluSx SINE Alu -17 295 1 5080 191 60 60 chr2 102606194 102606543 -150650040 + L1MC4a LINE L1 6459 6807 -1001 579 85 119 42 chr2 102606543 102606661 -150649922 + L1MB5 LINE L1 6048 6174 0 5080 191 60 60 chr2 102606661 102606841 -150649742 + L1MC4a LINE L1 6807 6986 -822 2146 126 3 10 chr2 102606841 102607151 -150649432 + AluSx SINE Alu 1 308 -4 5080 191 60 60 chr2 102607151 102607268 -150649315 + L1MC4a LINE L1 6986 7102 -706 2434 76 44 3 chr2 102607268 102607609 -150648974 + L1PA13 LINE L1 5806 6160 -3 5080 191 60 60 chr2 102607609 102607843 -150648740 + L1MC4a LINE L1 7102 7335 -473 1636 167 10 31 chr2 102607843 102608137 -150648446 + AluJb SINE Alu 1 288 -24 2122 117 0 23 chr2 102608143 102608442 -150648141 + AluSx SINE Alu 1 292 -20 5080 191 60 60 chr2 102608442 102608490 -150648093 + L1MC4a LINE L1 7339 7399 -409 1726 175 29 13 chr2 102608493 102608807 -150647776 + MER2 DNA MER2_type 2 320 -25 1425 224 84 18 chr2 102608819 102608905 -150647678 + L1MC4a LINE L1 7402 7481 -327 2239 108 3 0 chr2 102608905 102609201 -150647382 + AluSx SINE Alu 1 297 -15 1425 224 84 18 chr2 102609201 102609494 -150647089 + L1MC4a LINE L1 7481 7806 -2 624 227 64 17 chr2 102609929 102610101 -150646482 + MER104 DNA MER2_type 1 180 0 2274 281 96 56 chr2 102610131 102611159 -150645424 + L1M4b LINE L1 3 1071 -5788 2742 247 64 58 chr2 102611227 102611447 -150645136 + L1M4b LINE L1 1255 1472 -5485 2262 104 3 7 chr2 102611447 102611754 -150644829 - AluSx SINE Alu -6 306 1 2742 247 64 58 chr2 102611754 102611962 -150644621 + L1M4b LINE L1 1472 1677 -5280 2766 168 30 38 chr2 102611962 102612486 -150644097 + MLT2B1 LTR ERVL 1 520 0 2742 247 64 58 chr2 102612486 102613867 -150642716 + L1M4b LINE L1 1677 3109 -3848 3002 135 25 86 chr2 102613876 102614530 -150642053 + L1MB8 LINE L1 5564 6177 -1 2496 105 72 5 chr2 102615016 102615389 -150641194 + MER48 LTR ERV1 1 398 0 504 299 136 0 chr2 102615649 102615826 -150640757 + MIR SINE MIR 13 213 -49 21 0 0 0 chr2 102616414 102616435 -150640148 + AT_rich Low_complexity Low_complexity 1 21 0 1076 166 0 0 chr2 102616733 102616902 -150639681 + AluSg/x SINE Alu 133 301 -11 239 235 15 29 chr2 102617122 102617190 -150639393 + (CATATA)n Simple_repeat Simple_repeat 6 72 0 24 32 0 0 chr2 102617494 102617525 -150639058 + AT_rich Low_complexity Low_complexity 1 31 0 226 195 65 39 chr2 102618733 102618810 -150637773 - MIR SINE MIR -74 188 110 25 0 0 0 chr2 102618964 102618989 -150637594 + AT_rich Low_complexity Low_complexity 1 25 0 2213 106 14 3 chr2 102619337 102619630 -150636953 + AluSx SINE Alu 1 296 -16 38 61 0 0 chr2 102621654 102621720 -150634863 + GC_rich Low_complexity Low_complexity 1 66 0 1779 133 0 8 chr2 102621863 102622112 -150634471 - AluSx SINE Alu -65 247 1 359 184 149 0 chr2 102622117 102622204 -150634379 - LTR47A LTR ERVL -92 360 261 315 291 57 57 chr2 102622567 102622725 -150633858 - HAL1b LINE L1 -445 903 746 308 228 0 0 chr2 102622777 102622834 -150633749 - HAL1 LINE L1 -354 2153 2097 1707 152 4 4 chr2 102623549 102623826 -150632757 + AluSq SINE Alu 1 277 -36 2362 181 93 14 chr2 102624574 102625005 -150631578 + MLT2B1 LTR ERVL 1 475 -45 1405 196 156 0 chr2 102625005 102625235 -150631348 - MER7A DNA MER2_type -2692 346 59 1634 127 86 31 chr2 102625235 102625526 -150631057 + AluSg SINE Alu 1 307 -3 1405 196 156 0 chr2 102625526 102625596 -150630987 - MER7A DNA MER2_type -2979 59 1 2362 181 93 14 chr2 102625596 102625646 -150630937 + MLT2B1 LTR ERVL 475 520 0 201 121 0 0 chr2 102626071 102626104 -150630479 + (CA)n Simple_repeat Simple_repeat 2 34 0 274 345 34 8 chr2 102627094 102627213 -150629370 - L2 LINE L2 -5 3267 3146 1902 174 28 3 chr2 102627320 102627676 -150628907 + MLT1A1 LTR MaLR 1 365 0 235 236 264 35 chr2 102627862 102628036 -150628547 + L2 LINE L2 2183 2396 -918 2257 252 68 53 chr2 102628038 102628829 -150627754 + MER21B LTR ERV1 1 803 -60 1722 214 35 18 chr2 102629633 102630030 -150626553 - MER63B DNA MER1_type -32 404 1 193 232 74 74 chr2 102630402 102630497 -150626086 - L2 LINE L2 -6 3266 3172 222 227 15 15 chr2 102630821 102630882 -150625701 - L2 LINE L2 -318 2954 2894 490 236 223 0 chr2 102630882 102631030 -150625553 - MER5A DNA MER1_type 0 189 9 599 256 84 59 chr2 102631155 102631393 -150625190 - L2 LINE L2 -526 2788 2545 1407 68 0 0 chr2 102631404 102631580 -150625003 - AluY SINE Alu -11 300 125 336 136 0 0 chr2 102631580 102631624 -150624959 + (TG)n Simple_repeat Simple_repeat 2 45 0 35 0 0 0 chr2 102631757 102631792 -150624791 + GC_rich Low_complexity Low_complexity 1 35 0 367 137 82 0 chr2 102632596 102632669 -150623914 - MIR SINE MIR -110 152 74 2431 104 22 14 chr2 102633179 102633534 -150623049 + THE1B LTR MaLR 7 364 0 409 271 0 86 chr2 102633861 102634001 -150622582 - MIR SINE MIR -111 151 24 1642 141 27 20 chr2 102634089 102634368 -150622215 + AluJo SINE Alu 1 284 -28 414 0 0 0 chr2 102634368 102634414 -150622169 + (TC)n Simple_repeat Simple_repeat 1 46 0 1642 141 27 20 chr2 102634414 102634433 -150622150 + AluJo SINE Alu 284 301 -11 2140 101 7 3 chr2 102634433 102634728 -150621855 + AluSq SINE Alu 1 297 -16 203 143 119 0 chr2 102635637 102635679 -150620904 - L2 LINE L2 -211 3061 3015 2121 96 4 0 chr2 102635970 102636325 -150620258 - AluSp SINE Alu 0 358 3 1838 163 3 3 chr2 102636661 102636962 -150619621 - AluJb SINE Alu -10 302 2 22 35 0 0 chr2 102636962 102636991 -150619592 + AT_rich Low_complexity Low_complexity 1 29 0 1910 133 7 0 chr2 102637807 102638101 -150618482 + AluSq SINE Alu 1 296 -17 198 258 126 47 chr2 102638427 102638617 -150617966 + L2 LINE L2 2850 3054 -218 193 354 171 0 chr2 102638868 102638950 -150617633 + L2 LINE L2 3121 3216 -56 1991 134 3 0 chr2 102639428 102639719 -150616864 + AluSx SINE Alu 1 292 -20 1691 181 16 13 chr2 102640208 102640517 -150616066 - AluJb SINE Alu -2 310 1 2567 29 7 3 chr2 102642847 102643156 -150613427 + AluY SINE Alu 1 310 -1 200 371 29 9 chr2 102643647 102643752 -150612831 - L2 LINE L2 -1357 1957 1851 1679 165 3 31 chr2 102643852 102644173 -150612410 + AluJo SINE Alu 1 312 0 894 257 24 5 chr2 102644366 102644576 -150612007 - MIR SINE MIR -34 228 15 1748 155 3 7 chr2 102644618 102644908 -150611675 + AluJo SINE Alu 1 289 -23 260 366 35 21 chr2 102645070 102645212 -150611371 - MIR3 SINE MIR -21 187 44 1676 138 25 11 chr2 102646752 102647027 -150609556 - AluJo SINE Alu -33 279 1 3016 120 0 18 chr2 102647109 102647551 -150609032 - Tigger3(Golem) DNA MER2_type 0 3029 2596 1536 129 0 4 chr2 102647551 102647784 -150608799 + AluSx SINE Alu 1 232 -80 1572 126 7 33 chr2 102648351 102648621 -150607962 - AluJo SINE Alu -45 267 5 821 190 108 13 chr2 102649728 102650000 -150606583 + MLT1A1 LTR MaLR 1 347 -18 1408 245 108 65 chr2 102650049 102650801 -150605782 + LTR1B LTR ERV1 43 826 0 894 243 107 70 chr2 102650907 102650927 -150605656 + MLT1J LTR MaLR 2 20 -491 2979 137 139 2 chr2 102650927 102651474 -150605109 + LTR29 LTR ERV1 1 622 0 894 243 107 70 chr2 102651474 102651856 -150604727 + MLT1J LTR MaLR 20 419 -92 583 231 16 0 chr2 102651894 102652015 -150604568 - MER5B DNA MER1_type -32 146 24 20104 152 21 11 chr2 102652015 102652552 -150604031 + LTR29-int LTR ERV1 303 833 -6923 2710 94 8 3 chr2 102652552 102652912 -150603671 - THE1B LTR MaLR -2 362 1 20104 152 21 11 chr2 102652912 102656530 -150600053 + LTR29-int LTR ERV1 833 4538 -3218 1766 98 4 0 chr2 102656536 102656771 -150599812 - AluSx SINE Alu -76 236 1 694 252 112 68 chr2 102658408 102658762 -150597821 + L1ME4a LINE L1 5526 5916 -205 1860 151 0 3 chr2 102658762 102659054 -150597529 + AluJo SINE Alu 1 291 -21 694 252 112 68 chr2 102659054 102659270 -150597313 + L1ME4a LINE L1 5916 6121 0 320 211 21 74 chr2 102660236 102660331 -150596252 - MIR SINE MIR -111 151 62 2076 115 3 3 chr2 102660356 102660668 -150595915 - AluSq SINE Alu 0 313 2 1167 195 21 14 chr2 102660668 102660950 -150595633 + MER33 DNA MER1_type 37 320 -4 524 261 40 17 chr2 102661911 102662087 -150594496 - Charlie8 DNA MER1_type -2152 265 86 1539 182 7 10 chr2 102662920 102663228 -150593355 + AluJo SINE Alu 1 307 -5 2393 153 36 16 chr2 102663272 102663848 -150592735 - L1MA8 LINE L1 -4 6287 5656 1238 193 0 48 chr2 102663869 102664118 -150592465 - AluJb SINE Alu -26 286 50 460 214 0 0 chr2 102664137 102664221 -150592362 - AluJ/FLAM SINE Alu -224 88 5 771 92 197 7 chr2 102664223 102664365 -150592218 - L1M2 LINE L1 -624 5676 5508 2119 109 3 0 chr2 102664562 102664856 -150591727 + AluSq SINE Alu 1 295 -18 1740 181 0 0 chr2 102664867 102665159 -150591424 + AluJb SINE Alu 5 296 -16 1946 121 0 0 chr2 102665229 102665510 -150591073 + AluSx SINE Alu 21 301 -11 219 178 0 44 chr2 102665520 102665565 -150591018 - L2 LINE L2 -8 3264 3222 1346 180 25 35 chr2 102665609 102665925 -150590658 + L1MB8 LINE L1 5856 6168 -10 214 294 29 49 chr2 102666187 102666289 -150590294 + MIR SINE MIR 10 109 -153 2047 85 0 7 chr2 102666289 102666561 -150590022 - AluSq SINE Alu -13 300 31 1304 133 0 0 chr2 102666661 102666849 -150589734 - AluSq SINE Alu -97 216 29 318 225 106 78 chr2 102666856 102666998 -150589585 + HAL1 LINE L1 2253 2398 -109 794 200 98 56 chr2 102667052 102667267 -150589316 + MER58A DNA MER1_type 1 224 0 2539 218 138 87 chr2 102667500 102668050 -150588533 + L1MCa LINE L1 798 1319 -5107 1094 104 0 0 chr2 102668050 102668194 -150588389 + U4 snRNA snRNA 1 144 -1 2539 218 138 87 chr2 102668194 102668634 -150587949 + L1MCa LINE L1 1319 1735 -4691 2081 81 0 48 chr2 102668634 102668959 -150587624 + AluY SINE Alu 1 311 0 2539 218 138 87 chr2 102668959 102669399 -150587184 + L1MCa LINE L1 1735 2302 -4124 889 199 76 0 chr2 102669400 102669611 -150586972 + AluJo SINE Alu 85 311 -1 805 194 100 1 chr2 102669611 102669840 -150586743 + L1MCa LINE L1 2324 2607 -3890 835 154 0 22 chr2 102669840 102669976 -150586607 + AluSq/x SINE Alu 1 133 -179 1671 224 46 20 chr2 102669981 102670441 -150586142 + L1MCa LINE L1 2552 3023 -3403 235 229 12 121 chr2 102670634 102670717 -150585866 - L2 LINE L2 0 3272 3199 2049 128 10 0 chr2 102670879 102671184 -150585399 - AluSg SINE Alu 0 310 3 185 195 24 0 chr2 102671251 102671292 -150585291 - L3 LINE CR1 -6 1571 1530 2125 162 39 0 chr2 102671361 102671720 -150584863 - MLT1B LTR MaLR -14 376 4 291 355 123 24 chr2 102673085 102673468 -150583115 - L3 LINE CR1 -38 1539 1119 256 271 17 0 chr2 102673491 102673550 -150583033 - MLT1J2 LTR MaLR -291 159 100 1619 255 77 16 chr2 102673837 102674354 -150582229 - MLT1F1 LTR MaLR -10 557 9 284 270 70 143 chr2 102675645 102676618 -150579965 + L2 LINE L2 1621 2506 -808 2159 118 0 39 chr2 102676618 102676924 -150579659 - AluSx SINE Alu -18 294 1 284 270 70 143 chr2 102676924 102677051 -150579532 + L2 LINE L2 2506 2641 -673 1878 99 4 8 chr2 102677499 102677742 -150578841 - AluSq SINE Alu -16 297 56 1914 143 30 0 chr2 102677773 102678073 -150578510 + AluJo SINE Alu 1 309 -3 470 231 106 19 chr2 102678115 102678275 -150578308 + MIR SINE MIR 69 242 -20 452 158 53 44 chr2 102680567 102680681 -150575902 + L1MB2 LINE L1 6054 6168 -3 342 0 0 0 chr2 102680681 102680719 -150575864 + (TA)n Simple_repeat Simple_repeat 2 39 0 2351 98 0 3 chr2 102680719 102681016 -150575567 - AluSx SINE Alu -16 296 1 1264 219 22 66 chr2 102681027 102681318 -150575265 + L1MB7 LINE L1 5825 6098 -86 1117 191 4 60 chr2 102681318 102681569 -150575014 + MER8 DNA MER2_type 1 237 -2 1264 219 22 66 chr2 102681569 102681642 -150574941 + L1MB7 LINE L1 6098 6173 -11 1812 157 11 4 chr2 102683702 102683976 -150572607 + AluSq SINE Alu 1 276 -37 1120 59 0 0 chr2 102683978 102684114 -150572469 + AluY SINE Alu 176 311 0 358 286 16 0 chr2 102684170 102684296 -150572287 + L1ME4a LINE L1 5994 6121 0 1768 163 29 0 chr2 102684318 102684624 -150571959 - AluJb SINE Alu 0 314 1 234 264 56 72 chr2 102686071 102686196 -150570387 - L2 LINE L2 -608 2706 2584 182 278 0 0 chr2 102687409 102687463 -150569120 + MIR SINE MIR 161 214 -48 864 144 80 91 chr2 102688591 102688639 -150567944 - AluJo SINE Alu -127 185 138 2483 76 0 3 chr2 102688639 102688940 -150567643 - AluY SINE Alu -11 300 1 864 144 80 91 chr2 102688940 102689078 -150567505 - AluJo SINE Alu -174 138 1 223 241 0 76 chr2 102689947 102689962 -150566621 - L2 LINE L2 -6 3307 3292 2827 224 35 6 chr2 102689962 102690596 -150565987 - MER82 DNA MER2_type -1 652 1 223 241 0 76 chr2 102690596 102690659 -150565924 - L2 LINE L2 -21 3292 3235 548 226 137 0 chr2 102690777 102690923 -150565660 + L1ME3A LINE L1 6003 6168 -2 195 331 105 0 chr2 102692077 102692201 -150564382 - MIR3 SINE MIR -18 190 54 331 344 20 26 chr2 102692692 102692887 -150563696 - MIR3 SINE MIR -54 154 6 818 188 58 43 chr2 102692972 102693179 -150563404 - MER20 DNA MER1_type -4 215 6 2272 120 0 13 chr2 102693353 102693669 -150562914 + AluSx SINE Alu 1 312 0 1708 157 39 20 chr2 102694278 102694583 -150562000 - AluJo SINE Alu -1 311 1 1290 69 134 0 chr2 102694601 102694803 -150561780 + MER30 DNA MER1_type 2 230 0 23 68 0 0 chr2 102695835 102695879 -150560704 + GC_rich Low_complexity Low_complexity 1 44 0 22 35 0 0 chr2 102695896 102695925 -150560658 + GC_rich Low_complexity Low_complexity 1 29 0 263 321 67 8 chr2 102696969 102697103 -150559480 - MIR SINE MIR -59 203 62 198 233 0 0 chr2 102699409 102699469 -150557114 + (TTCA)n Simple_repeat Simple_repeat 1 60 0 200 221 29 44 chr2 102699873 102699941 -150556642 - L2 LINE L2 -568 2746 2680 2089 115 38 0 chr2 102700408 102700695 -150555888 - AluSg SINE Alu -12 298 1 615 313 33 36 chr2 102707356 102707717 -150548866 + L1MC4a LINE L1 5671 6030 -1778 479 240 58 67 chr2 102758041 102758296 -150498287 + L1MC/D LINE L1 5033 5286 -860 2068 114 0 10 chr2 102758296 102758585 -150497998 + AluSc SINE Alu 1 286 -23 479 240 58 67 chr2 102758585 102758658 -150497925 + L1MC/D LINE L1 5286 5358 -788 401 323 159 34 chr2 102758670 102759085 -150497498 + L1MC/D LINE L1 5345 5811 -1997 366 106 0 0 chr2 102759220 102759286 -150497297 + L1MA7 LINE L1 6221 6286 -5 303 175 0 0 chr2 102759293 102759356 -150497227 + L1M4 LINE L1 1544 1606 -5253 1797 192 31 118 chr2 102759364 102759905 -150496678 - L1M4b LINE L1 -5398 1461 992 1783 147 32 29 chr2 102759905 102760252 -150496331 - L1MA9 LINE L1 -7 6305 5958 1797 192 31 118 chr2 102760252 102760408 -150496175 - L1M4b LINE L1 -5867 992 824 297 231 0 0 chr2 102760447 102760525 -150496058 + L1ME LINE L1 5623 5700 -421 2335 233 55 45 chr2 102761289 102761789 -150494794 + L1M4 LINE L1 4619 5113 -1844 2208 110 0 0 chr2 102761789 102762079 -150494504 + AluSx SINE Alu 1 290 -22 2335 233 55 45 chr2 102762079 102762090 -150494493 + L1M4 LINE L1 5113 5122 -1835 1844 149 19 29 chr2 102762090 102762405 -150494178 + AluJo SINE Alu 1 312 0 2335 233 55 45 chr2 102762405 102762791 -150493792 + L1M4 LINE L1 5122 5526 -1431 16298 62 7 21 chr2 102762907 102765167 -150491416 - L1P LINE L1 -3914 2232 5 298 178 63 138 chr2 102765149 102765323 -150491260 - L1M4 LINE L1 -3038 3108 2948 * 180 325 78 13 chr2 102765762 102765839 -150490744 + L2 LINE L2 3189 3270 -2 23 33 0 0 chr2 102765904 102765934 -150490649 + AT_rich Low_complexity Low_complexity 1 30 0 2482 80 0 3 chr2 102766828 102767140 -150489443 - AluSq SINE Alu -2 311 1 231 36 0 0 chr2 102767175 102767203 -150489380 + (TG)n Simple_repeat Simple_repeat 1 28 0 2109 118 17 0 chr2 102767505 102767794 -150488789 + AluSg SINE Alu 1 294 -16 27 0 0 0 chr2 102768065 102768092 -150488491 + AT_rich Low_complexity Low_complexity 1 27 0 187 335 92 56 chr2 102768814 102769098 -150487485 + L2 LINE L2 2192 2485 -829 291 171 0 0 chr2 102769423 102769479 -150487104 - MER83B LTR ERV1 -97 276 221 1201 133 0 6 chr2 102769954 102770127 -150486456 - AluSc SINE Alu 0 309 138 228 279 131 0 chr2 102770134 102770195 -150486388 + L2 LINE L2 3204 3272 0 323 270 20 10 chr2 102770258 102770358 -150486225 + MARNA DNA Mariner 121 221 -365 2215 94 0 7 chr2 102770378 102770687 -150485896 - AluSg SINE Alu -3 307 1 1922 81 0 8 chr2 102770815 102771062 -150485521 + AluY SINE Alu 1 245 -66 829 191 60 38 chr2 102772269 102772452 -150484131 + MER5A DNA MER1_type 2 188 -1 380 291 164 8 chr2 102772478 102772612 -150483971 + MER5A DNA MER1_type 35 189 0 1987 158 27 24 chr2 102773049 102773398 -150483185 - L1MA7 LINE L1 -131 6160 5808 2300 101 0 62 chr2 102773398 102773756 -150482827 + MER1B DNA MER1_type 2 337 0 1987 158 27 24 chr2 102773756 102773817 -150482766 - L1MA7 LINE L1 -483 5808 5749 370 167 83 12 chr2 102773817 102773883 -150482700 - L1M4b LINE L1 -5299 1560 1485 2405 76 0 13 chr2 102773883 102774186 -150482397 + AluY SINE Alu 1 299 -12 370 167 83 12 chr2 102774186 102774203 -150482380 - L1M4b LINE L1 -5374 1485 1471 321 292 69 8 chr2 102774218 102774348 -150482235 + L1MEc LINE L1 1823 1960 -4436 9877 211 68 13 chr2 102774386 102776218 -150480365 + L1MB7 LINE L1 2513 4243 -1935 2223 112 3 0 chr2 102776218 102776512 -150480071 + AluSc SINE Alu 1 295 -14 9877 211 68 13 chr2 102776512 102777314 -150479269 + L1MB7 LINE L1 4243 4999 -1179 1600 169 79 0 chr2 102777314 102777580 -150479003 + AluJo SINE Alu 9 295 -17 9877 211 68 13 chr2 102777580 102778235 -150478348 + L1MB7 LINE L1 4999 5991 -187 1849 156 7 7 chr2 102778404 102778711 -150477872 - AluJb SINE Alu -5 307 1 530 160 235 0 chr2 102778713 102778832 -150477751 + L1MB7 LINE L1 6028 6174 -10 830 241 55 0 chr2 102778989 102779188 -150477395 + MER20 DNA MER1_type 10 219 0 309 289 39 58 chr2 102779204 102779360 -150477223 - L1ME LINE L1 -690 5431 5279 1006 234 13 19 chr2 102779777 102780089 -150476494 + L1MD2 LINE L1 4942 5251 -895 17313 93 4 6 chr2 102780089 102782055 -150474528 + Charlie3 DNA MER1_type 1 1963 -743 1945 96 41 0 chr2 102782055 102782325 -150474258 + AluSx SINE Alu 23 303 -9 17313 93 4 6 chr2 102782325 102782664 -150473919 + Charlie3 DNA MER1_type 1963 2301 -405 1755 75 9 0 chr2 102782665 102782891 -150473692 + AluSg/x SINE Alu 73 300 -12 767 282 212 42 chr2 102783313 102783959 -150472624 + L2 LINE L2 1701 2456 -858 262 91 0 0 chr2 102784153 102784186 -150472397 + MSTB LTR MaLR 123 155 -271 237 295 134 40 chr2 102784979 102785128 -150471455 + L1MEd LINE L1 633 795 -5735 2512 155 12 139 chr2 102785172 102785811 -150470772 + LTR6A LTR ERV1 1 564 0 911 275 88 37 chr2 102785825 102786447 -150470136 + L1MEd LINE L1 949 1602 -4928 1188 144 110 46 chr2 102786488 102786815 -150469768 + L1MEd LINE L1 2210 2557 -3983 1908 205 156 14 chr2 102786815 102787366 -150469217 + L1MD2 LINE L1 5708 6336 -23 304 306 16 33 chr2 102787379 102787500 -150469083 + MER5B DNA MER1_type 50 168 -10 2375 175 21 7 chr2 102787514 102787932 -150468651 + MSTB LTR MaLR 1 424 -2 2160 101 11 7 chr2 102788247 102788526 -150468057 + AluSg SINE Alu 1 283 -27 180 0 0 0 chr2 102788526 102788546 -150468037 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 1814 186 0 13 chr2 102788600 102788912 -150467671 + AluJb SINE Alu 1 308 -4 649 207 133 108 chr2 102789131 102789360 -150467223 + L1ME4a LINE L1 4682 4925 -1221 587 139 0 19 chr2 102789360 102789468 -150467115 + L1PA13 LINE L1 6056 6161 -2 649 207 133 108 chr2 102789468 102789600 -150466983 + L1ME4a LINE L1 4925 5052 -1094 665 245 124 26 chr2 102789745 102789978 -150466605 + L2 LINE L2 3011 3266 -47 509 265 52 7 chr2 102790038 102790174 -150466409 + L2 LINE L2 3171 3312 -1 22 35 0 0 chr2 102791364 102791393 -150465190 + AT_rich Low_complexity Low_complexity 1 29 0 2241 105 0 7 chr2 102792143 102792438 -150464145 - AluSg SINE Alu -17 293 1 23 78 0 0 chr2 102792608 102792659 -150463924 + AT_rich Low_complexity Low_complexity 1 51 0 1303 245 55 12 chr2 102794454 102794781 -150461802 - MER58B DNA MER1_type 0 341 1 372 348 156 26 chr2 102795022 102795994 -150460589 - L2 LINE L2 -683 2631 1533 23 0 0 0 chr2 102797913 102797936 -150458647 + AT_rich Low_complexity Low_complexity 1 23 0 239 325 36 66 chr2 102798795 102798961 -150457622 + L2 LINE L2 2545 2705 -609 348 106 0 0 chr2 102799333 102799380 -150457203 + AluJ/FLAM SINE Alu 30 76 -226 1960 120 32 0 chr2 102799536 102799819 -150456764 + AluSx SINE Alu 5 296 -16 252 314 167 12 chr2 102801061 102801319 -150455264 + L1ME4a LINE L1 5255 5552 -2256 489 153 153 0 chr2 102801512 102801597 -150454986 + FLAM_C SINE Alu 22 119 -24 261 0 0 0 chr2 102801597 102801626 -150454957 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 238 275 81 27 chr2 102801776 102801925 -150454658 + L1ME4a LINE L1 5779 5935 -186 191 276 79 53 chr2 102802163 102802239 -150454344 - MIR SINE MIR 0 262 185 1122 108 151 5 chr2 102802714 102802926 -150453657 - L1MC3 LINE L1 -1 7784 7542 545 321 83 15 chr2 102804103 102804427 -150452156 + L2 LINE L2 2041 2386 -928 2336 101 0 0 chr2 102805758 102806054 -150450529 + AluSx SINE Alu 1 296 -16 787 110 81 15 chr2 102807227 102807363 -150449220 + L1PA10 LINE L1 6015 6159 -9 22 0 0 0 chr2 102807429 102807451 -150449132 + AT_rich Low_complexity Low_complexity 1 22 0 1507 191 38 0 chr2 102808510 102808825 -150447758 - L1MB1 LINE L1 -38 6130 5804 633 200 68 32 chr2 102808827 102809047 -150447536 - L1M3c LINE L1 -4574 1567 1340 590 242 0 0 chr2 102809064 102809188 -150447395 + FLAM_C SINE Alu 1 124 -19 2510 52 7 7 chr2 102809260 102809568 -150447015 - AluY SINE Alu -3 308 1 4134 194 118 43 chr2 102809568 102811265 -150445318 - L1MC2 LINE L1 -171 6567 16 319 341 130 9 chr2 102811371 102811559 -150445024 + MIR SINE MIR 35 243 -19 752 280 159 18 chr2 102812246 102812643 -150443940 + L1MC4a LINE L1 5256 5708 -2100 312 183 17 0 chr2 102812637 102812697 -150443886 - L1MC4a LINE L1 -1894 5914 5854 * 195 348 0 0 chr2 102813222 102813291 -150443292 - MER5A DNA MER1_type -111 78 10 1382 181 70 0 chr2 102813465 102813724 -150442859 - AluJo SINE Alu -35 277 1 2022 203 85 42 chr2 102814037 102814420 -150442163 + MLT1F1 LTR MaLR 1 415 -152 2028 139 0 3 chr2 102814420 102814722 -150441861 - AluSx SINE Alu -11 301 1 2022 203 85 42 chr2 102814722 102814880 -150441703 + MLT1F1 LTR MaLR 415 565 -2 1777 160 14 10 chr2 102815820 102816108 -150440475 - AluSx SINE Alu -23 289 1 24 32 0 0 chr2 102816211 102816242 -150440341 + AT_rich Low_complexity Low_complexity 1 31 0 2167 115 3 0 chr2 102816474 102816770 -150439813 + AluSx SINE Alu 1 297 -15 278 307 73 0 chr2 102817253 102817403 -150439180 + L1M4 LINE L1 4733 4893 -1253 1605 120 30 0 chr2 102817625 102817892 -150438691 - L1MA4 LINE L1 -6 6294 6020 1013 98 0 0 chr2 102817892 102818035 -150438548 - L1MA4 LINE L1 -562 5738 5596 227 226 65 21 chr2 102818734 102818827 -150437756 + L1MC4a LINE L1 6083 6179 -1629 27 49 0 0 chr2 102818996 102819037 -150437546 + AT_rich Low_complexity Low_complexity 1 41 0 2218 120 0 0 chr2 102819045 102819345 -150437238 + AluSx SINE Alu 1 300 -12 192 152 0 0 chr2 102819350 102819383 -150437200 + (TA)n Simple_repeat Simple_repeat 2 34 0 193 402 103 0 chr2 102819603 102819690 -150436893 - L2 LINE L2 -38 3234 3139 296 257 29 81 chr2 102819773 102819909 -150436674 - L2 LINE L2 -2 3311 3183 2733 202 63 20 chr2 102821472 102822302 -150434281 - L1MD2 LINE L1 -10 6626 5780 207 139 0 0 chr2 102822331 102822367 -150434216 + (TA)n Simple_repeat Simple_repeat 1 36 0 1659 160 40 4 chr2 102822367 102822642 -150433941 - AluSx SINE Alu -27 285 1 1482 231 56 5 chr2 102822648 102823060 -150433523 - L1MD2 LINE L1 -986 5554 5122 3380 176 146 19 chr2 102823066 102823378 -150433205 - L1MD2 LINE L1 -4078 2462 2191 1587 185 3 41 chr2 102823378 102823692 -150432891 + AluJb SINE Alu 6 307 -5 3380 176 146 19 chr2 102823692 102824387 -150432196 - L1MD2 LINE L1 -4349 2191 1327 3507 160 40 21 chr2 102824395 102825285 -150431298 - L1MB4 LINE L1 -2 6178 5215 818 164 13 7 chr2 102825290 102825442 -150431141 - L1MC2 LINE L1 -11 6333 6181 648 141 0 0 chr2 102825542 102825634 -150430949 + AluSg/x SINE Alu 190 313 0 289 0 0 0 chr2 102825634 102825666 -150430917 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 2667 238 62 15 chr2 102825976 102826762 -150429821 - L1ME3 LINE L1 -30 6132 5310 531 55 44 0 chr2 102826774 102826865 -150429718 + (TAGA)n Simple_repeat Simple_repeat 1 95 0 2037 97 19 36 chr2 102826865 102827163 -150429420 - AluSq SINE Alu -18 295 1 180 214 0 0 chr2 102827208 102827264 -150429319 + (TATG)n Simple_repeat Simple_repeat 4 59 0 734 234 102 62 chr2 102827503 102827952 -150428631 - L1ME4a LINE L1 -47 6074 5608 1546 219 50 26 chr2 102828184 102828567 -150428016 + MLT1D LTR MaLR 113 504 -1 21 0 0 0 chr2 102828688 102828709 -150427874 + AT_rich Low_complexity Low_complexity 1 21 0 381 286 136 14 chr2 102830716 102830856 -150425727 - MIR SINE MIR -75 187 31 680 281 94 27 chr2 102831456 102831858 -150424725 + L1MEc LINE L1 93 521 -5875 2515 145 19 51 chr2 102832008 102832183 -150424400 + MLT1C LTR MaLR 10 189 -278 2369 104 0 0 chr2 102832183 102832490 -150424093 + AluSq SINE Alu 1 307 -6 2515 145 19 51 chr2 102832490 102832784 -150423799 + MLT1C LTR MaLR 189 464 -3 2231 107 0 7 chr2 102832964 102833263 -150423320 + AluSq SINE Alu 1 297 -16 1071 56 0 0 chr2 102833559 102833685 -150422898 + AluY SINE Alu 172 297 -14 210 395 45 25 chr2 102834640 102834797 -150421786 + MIR3 SINE MIR 42 201 -7 205 307 0 34 chr2 102834933 102835021 -150421562 - MIR SINE MIR 0 262 178 575 136 0 0 chr2 102835526 102835607 -150420976 - AluJb SINE Alu -20 292 212 3711 219 45 36 chr2 102835628 102836021 -150420562 + L1M4 LINE L1 4156 4544 -1602 1818 182 0 7 chr2 102836021 102836323 -150420260 + AluJb SINE Alu 1 300 -12 3711 219 45 36 chr2 102836323 102837069 -150419514 + L1M4 LINE L1 4544 5305 -841 1226 77 112 15 chr2 102837075 102837271 -150419312 + AluSc SINE Alu 4 218 -91 1720 127 0 4 chr2 102837372 102837608 -150418975 - AluSq SINE Alu -35 278 44 505 260 81 53 chr2 102837608 102838247 -150418336 - L1M4 LINE L1 -3911 3046 2476 1185 165 145 41 chr2 102838291 102838533 -150418050 + Tigger7 DNA MER2_type 1 267 -466 475 180 20 40 chr2 102838533 102838633 -150417950 + Tigger7 DNA MER2_type 2390 2487 0 2052 240 39 42 chr2 102838747 102839766 -150416817 - L1M4 LINE L1 -4536 2423 1434 880 333 43 28 chr2 102840022 102840529 -150416054 + L1MA4 LINE L1 509 1023 -5756 14982 180 50 20 chr2 102840867 102845205 -150411378 + L1MA4 LINE L1 1576 6242 -760 2774 118 26 12 chr2 102845205 102845629 -150410954 - MER57B LTR ERV1 -4 430 1 14982 180 50 20 chr2 102845629 102846409 -150410174 + L1MA4 LINE L1 6242 6997 -5 15424 191 20 6 chr2 102846517 102850774 -150405809 + L1PA13 LINE L1 697 5032 -1765 5220 115 53 7 chr2 102850877 102851002 -150405581 + L1PA13 LINE L1 5187 5305 -1509 2273 105 0 7 chr2 102851002 102851298 -150405285 + AluSx SINE Alu 1 294 -18 5220 115 53 7 chr2 102851298 102852765 -150403818 + L1PA13 LINE L1 5305 6814 0 2196 131 78 53 chr2 102852959 102853394 -150403189 - Tigger2 DNA MER2_type 0 2718 2273 463 119 0 15 chr2 102853384 102853451 -150403132 - Tigger2 DNA MER2_type -2649 69 4 * 261 231 88 44 chr2 102854404 102854495 -150402088 + L2 LINE L2 3214 3308 -5 333 0 0 0 chr2 102855145 102855182 -150401401 + (CA)n Simple_repeat Simple_repeat 2 38 0 272 132 53 0 chr2 102855182 102855252 -150401331 + (TA)n Simple_repeat Simple_repeat 1 74 0 322 233 43 26 chr2 102855291 102855407 -150401176 + L1MC4 LINE L1 6586 6703 -1339 346 238 7 7 chr2 102855482 102855633 -150400950 + (TA)n Simple_repeat Simple_repeat 1 151 0 2446 80 0 6 chr2 102856005 102856317 -150400266 + AluSg SINE Alu 1 310 0 998 252 39 7 chr2 102856976 102857285 -150399298 + L1ME2 LINE L1 3943 4261 -1885 346 156 31 0 chr2 102857285 102857349 -150399234 + FLAM_A SINE Alu 65 130 -3 2388 75 0 0 chr2 102857355 102857648 -150398935 + AluY SINE Alu 1 293 -18 2087 129 3 0 chr2 102857657 102857960 -150398623 + AluSp SINE Alu 1 304 -9 878 219 0 0 chr2 102857968 102858132 -150398451 + FRAM SINE Alu 1 158 -18 839 217 112 4 chr2 102858133 102858465 -150398118 + L1ME2 LINE L1 5155 5525 -639 594 215 18 91 chr2 102858481 102858624 -150397959 - MER105 DNA DNA -1 203 80 1640 107 139 48 chr2 102858624 102858933 -150397650 + MER44D DNA MER2_type 2 608 -1 594 215 18 91 chr2 102858933 102859008 -150397575 - MER105 DNA DNA -124 80 1 862 236 55 38 chr2 102859010 102859302 -150397281 + L1ME2 LINE L1 5525 5821 -345 15804 147 63 6 chr2 102859308 102861796 -150394787 + L1PB1 LINE L1 1 2347 -4520 264 100 0 0 chr2 102861796 102861836 -150394747 + (CATA)n Simple_repeat Simple_repeat 2 41 0 15804 147 63 6 chr2 102861836 102865838 -150390745 + L1PB1 LINE L1 2347 6867 0 23 0 0 0 chr2 102865838 102865861 -150390722 + AT_rich Low_complexity Low_complexity 1 23 0 499 171 0 9 chr2 102865989 102866094 -150390489 + L1 LINE L1 3236 3339 -2807 2136 101 4 0 chr2 102866094 102866372 -150390211 - AluSg SINE Alu -31 279 1 588 260 54 8 chr2 102866374 102866403 -150390180 + L1ME2 LINE L1 5894 5920 -242 5048 176 48 5 chr2 102866403 102867439 -150389144 - Tigger6a DNA MER2_type -1 1082 2 588 260 54 8 chr2 102867439 102867616 -150388967 + L1ME2 LINE L1 5920 6108 -54 610 257 140 15 chr2 102868059 102868466 -150388117 + L1ME LINE L1 2136 2569 -3646 399 221 52 90 chr2 102868494 102868589 -150387994 + L1ME LINE L1 3016 3113 -3102 2376 93 0 6 chr2 102868589 102868902 -150387681 + AluY SINE Alu 1 311 0 399 221 52 90 chr2 102868902 102869095 -150387488 + L1ME LINE L1 3113 3293 -2922 607 293 61 57 chr2 102869289 102869464 -150387119 + L1ME LINE L1 3566 3739 -2476 2436 78 3 0 chr2 102869464 102869770 -150386813 + AluSp SINE Alu 1 307 -6 607 293 61 57 chr2 102869770 102870119 -150386464 + L1ME LINE L1 3739 4092 -2123 1199 257 112 53 chr2 102870159 102870972 -150385611 + L1ME LINE L1 4212 5087 -1128 2614 43 0 0 chr2 102870972 102871272 -150385311 + AluY SINE Alu 1 300 -11 1199 257 112 53 chr2 102871272 102871377 -150385206 + L1ME LINE L1 5087 5184 -1031 2011 60 78 11 chr2 102871415 102871684 -150384899 + AluY SINE Alu 1 287 -24 566 193 125 28 chr2 102871689 102871865 -150384718 + L1ME LINE L1 5352 5544 -687 2212 246 73 23 chr2 102871903 102872578 -150384005 + L1ME3A LINE L1 4383 5023 -1147 2363 100 0 0 chr2 102872578 102872887 -150383696 - AluSg SINE Alu -1 309 1 2212 246 73 23 chr2 102872887 102873676 -150382907 + L1ME3A LINE L1 5023 5919 -251 23256 31 1 1 chr2 102873942 102877841 -150378742 + L1PA4 LINE L1 2251 6149 -6 253 229 0 0 chr2 102878447 102878495 -150378088 + MIR SINE MIR 205 252 -10 2156 110 0 3 chr2 102878605 102878896 -150377687 + AluSx SINE Alu 1 290 -22 22 35 0 0 chr2 102878899 102878928 -150377655 + AT_rich Low_complexity Low_complexity 1 29 0 4327 100 30 16 chr2 102879076 102879715 -150376868 - L1PA11 LINE L1 0 6174 5527 277 266 13 0 chr2 102880429 102880508 -150376075 + (TA)n Simple_repeat Simple_repeat 2 81 0 339 234 34 126 chr2 102880576 102880751 -150375832 + L3 LINE CR1 883 1041 -536 383 267 6 6 chr2 102880781 102880942 -150375641 - L1 LINE L1 -2900 3246 3086 * 9906 33 2 29 chr2 102880930 102882007 -150374576 - L1PA4 LINE L1 -4 6151 5164 10185 47 3 116 chr2 102882007 102883564 -150373019 - SVA Other Other 0 1386 5 9906 33 2 29 chr2 102883564 102884561 -150372022 - L1PA4 LINE L1 -991 5164 4141 * 19588 39 4 5 chr2 102884559 102887022 -150369561 + L1PA4 LINE L1 1674 4132 -2014 2284 103 10 0 chr2 102887133 102887434 -150369149 - AluSx SINE Alu -8 304 1 321 276 30 96 chr2 102888161 102888360 -150368223 + MIR SINE MIR 2 187 -75 213 365 47 0 chr2 102888593 102888678 -150367905 + L2 LINE L2 3156 3244 -28 180 111 0 0 chr2 102889279 102889306 -150367277 + (TA)n Simple_repeat Simple_repeat 2 28 0 228 396 108 7 chr2 102890171 102890310 -150366273 - L2 LINE L2 -3 3269 3117 2533 224 72 30 chr2 102890333 102891388 -150365195 + L1MCa LINE L1 2245 3336 -3090 2101 110 7 13 chr2 102891391 102891713 -150364870 + AluSq SINE Alu 1 313 0 10540 209 32 19 chr2 102891726 102894640 -150361943 + L1 LINE L1 1733 4677 -1469 2275 148 31 36 chr2 102894641 102895193 -150361390 + LTR10E LTR ERV1 1 602 0 2719 210 21 4 chr2 102895193 102895864 -150360719 + L1 LINE L1 4675 5353 -801 608 103 0 0 chr2 102895866 102895953 -150360630 - AluSg/x SINE Alu -10 302 216 2183 100 17 3 chr2 102896534 102896825 -150359758 - AluSx SINE Alu -17 295 1 1506 271 25 23 chr2 102896864 102897656 -150358927 + L1M4 LINE L1 1143 1921 -4725 * 9560 96 7 6 chr2 102897655 102899059 -150357524 + L1P LINE L1 1787 3191 -2955 * 28551 62 5 3 chr2 102899043 102903570 -150353013 + L1PA7 LINE L1 1619 6154 0 349 307 42 5 chr2 102903567 102903756 -150352827 + L1M4 LINE L1 2056 2251 -4574 * 1204 151 0 28 chr2 102904118 102904330 -150352253 + MER46A DNA MER2_type 31 236 0 8960 220 77 35 chr2 102904368 102904633 -150351950 + L1MA9 LINE L1 2341 2594 -4216 2029 150 26 3 chr2 102904633 102904973 -150351610 + MER7A DNA MER2_type 1 346 0 8960 220 77 35 chr2 102904973 102906310 -150350273 + L1MA9 LINE L1 2594 3874 -2936 2286 41 0 11 chr2 102906310 102906579 -150350004 + AluY SINE Alu 29 294 -17 252 0 0 0 chr2 102906582 102906610 -150349973 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 1727 173 25 0 chr2 102906613 102906890 -150349693 + AluJb SINE Alu 2 285 -27 8960 220 77 35 chr2 102906890 102909567 -150347016 + L1MA9 LINE L1 3876 6805 -5 213 121 0 0 chr2 102909601 102909634 -150346949 + (GA)n Simple_repeat Simple_repeat 2 34 0 958 173 22 11 chr2 102909639 102909818 -150346765 + AluJb SINE Alu 127 307 -5 5884 206 29 92 chr2 102909826 102909860 -150346723 + L1M4 LINE L1 3642 3677 -2967 2354 77 0 7 chr2 102909860 102910159 -150346424 + AluY SINE Alu 1 297 -14 5884 206 29 92 chr2 102910159 102912117 -150344466 + L1M4 LINE L1 3677 5509 -1135 806 177 12 6 chr2 102912132 102912296 -150344287 + L1MB8 LINE L1 6014 6178 0 862 216 147 18 chr2 102912296 102912744 -150343839 + L1MD2 LINE L1 2950 3455 -2691 2130 123 3 3 chr2 102912744 102913036 -150343547 + AluSg SINE Alu 1 292 -18 333 62 0 0 chr2 102913038 102913086 -150343497 + (TA)n Simple_repeat Simple_repeat 2 49 0 281 169 34 0 chr2 102913124 102913183 -150343400 + Alu SINE Alu 236 296 -6 4092 213 68 62 chr2 102913217 102913341 -150343242 + L1MD2 LINE L1 3846 3968 -2194 2136 98 0 14 chr2 102913341 102913626 -150342957 + AluSx SINE Alu 1 281 -31 4092 213 68 62 chr2 102913626 102913702 -150342881 + L1MD2 LINE L1 3968 4042 -2120 1554 110 0 5 chr2 102913702 102913921 -150342662 + AluSg/x SINE Alu 82 299 -11 4092 213 68 62 chr2 102913921 102915419 -150341164 + L1MD2 LINE L1 4042 5570 -592 916 93 7 0 chr2 102915425 102915564 -150341019 - L1MA2 LINE L1 -103 6201 6062 820 184 18 0 chr2 102915563 102915726 -150340857 + L1MD2 LINE L1 5573 5738 -428 * 1627 170 44 28 chr2 102915726 102916044 -150340539 + MLT1B LTR MaLR 1 323 -67 399 302 35 35 chr2 102916049 102916307 -150340276 + L1M4 LINE L1 2507 2764 -3382 1023 210 0 19 chr2 102916880 102917085 -150339498 + AluJo SINE Alu 1 201 -111 482 121 0 0 chr2 102917236 102917319 -150339264 + AluJ/FRAM SINE Alu 229 311 -1 24 0 0 0 chr2 102917602 102917626 -150338957 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr2 102919322 102919351 -150337232 + AT_rich Low_complexity Low_complexity 1 29 0 1351 236 144 26 chr2 102920195 102920696 -150335887 + L1MD2 LINE L1 5771 6330 -29 1940 153 3 0 chr2 102920720 102921008 -150335575 - AluSx SINE Alu -23 289 1 1046 172 14 33 chr2 102921022 102921239 -150335344 + L1ME1 LINE L1 5768 5973 -193 1750 168 7 31 chr2 102921572 102921864 -150334719 - AluJb SINE Alu -25 287 3 1093 96 0 0 chr2 102921900 102922036 -150334547 + AluSq/x SINE Alu 1 136 -176 2015 129 3 10 chr2 102922036 102922339 -150334244 + AluSq SINE Alu 1 301 -12 32797 54 9 49 chr2 102922349 102924673 -150331910 + L1PA5 LINE L1 11 2426 -3728 2412 85 0 0 chr2 102924673 102924967 -150331616 - AluSg1 SINE Alu -15 294 1 32797 54 9 49 chr2 102924967 102929115 -150327468 + L1PA5 LINE L1 2426 6154 0 288 304 91 26 chr2 102929141 102929493 -150327090 + L1MC4a LINE L1 2191 2565 -3581 423 204 108 21 chr2 102929555 102929648 -150326935 - MER63 DNA MER1_type -335 727 1 3597 236 110 43 chr2 102929661 102931168 -150325415 + L1MC4a LINE L1 4729 5213 -933 2040 46 0 4 chr2 102931168 102931409 -150325174 + AluY SINE Alu 69 308 -3 3597 236 110 43 chr2 102931409 102931614 -150324969 + L1MC4a LINE L1 5213 5403 -743 322 215 41 50 chr2 102931716 102931837 -150324746 + L1MC4 LINE L1 7923 8042 0 4375 197 78 0 chr2 102932027 102932925 -150323658 + L1PB1 LINE L1 1 968 -5895 308 159 0 0 chr2 102932934 102932978 -150323605 + L1PB1 LINE L1 1363 1406 -5457 1977 102 8 0 chr2 102932978 102933242 -150323341 - AluSx SINE Alu -46 266 1 1361 89 25 0 chr2 102933242 102933445 -150323138 + L1PB1 LINE L1 2035 2242 -4621 203 152 0 0 chr2 102933478 102933511 -150323072 + (TG)n Simple_repeat Simple_repeat 1 33 0 11214 191 13 47 chr2 102933621 102935155 -150321428 + L1PB1 LINE L1 2326 3910 -2957 2071 102 14 0 chr2 102935155 102935439 -150321144 - AluY SINE Alu -23 288 1 11214 191 13 47 chr2 102935439 102935541 -150321042 + L1PB1 LINE L1 3910 4014 -2853 1986 128 0 27 chr2 102935541 102935680 -150320903 + AluSx SINE Alu 1 142 -170 2208 124 0 6 chr2 102935680 102935994 -150320589 + AluSx SINE Alu 1 312 0 1986 128 0 27 chr2 102935994 102936151 -150320432 + AluSx SINE Alu 142 289 -23 195 42 0 0 chr2 102936160 102936184 -150320399 + (CAT)n Simple_repeat Simple_repeat 2 25 0 11214 191 13 47 chr2 102936184 102939293 -150317290 + L1PB1 LINE L1 4022 6674 -193 2691 20 0 0 chr2 102939293 102939594 -150316989 + AluYa5 SINE Alu 1 301 -10 11214 191 13 47 chr2 102939594 102939782 -150316801 + L1PB1 LINE L1 6674 6867 0 22 35 0 0 chr2 102939828 102939857 -150316726 + AT_rich Low_complexity Low_complexity 1 29 0 192 77 0 0 chr2 102941455 102941481 -150315102 + (GAAAA)n Simple_repeat Simple_repeat 3 28 0 52 17 0 0 chr2 102942578 102942637 -150313946 + AT_rich Low_complexity Low_complexity 1 59 0 805 219 32 0 chr2 102992970 102993125 -150263458 - FRAM SINE Alu -17 159 1 393 22 0 0 chr2 102993657 102993703 -150262880 + (CA)n Simple_repeat Simple_repeat 1 46 0 1540 159 4 0 chr2 102993719 102993952 -150262631 - AluSx SINE Alu -23 289 56 1261 125 8 91 chr2 102995673 102995937 -150260646 + L1MA7 LINE L1 6050 6291 0 2678 197 36 16 chr2 102996484 102997337 -150259246 - L1 LINE L1 -3357 4208 3338 234 22 22 44 chr2 102997338 102997383 -150259200 + (TTATA)n Simple_repeat Simple_repeat 5 48 0 1110 117 0 0 chr2 102997384 102997538 -150259045 - AluY SINE Alu -26 285 132 677 295 60 44 chr2 102997843 102998158 -150258425 - L2 LINE L2 -1260 2054 1735 351 0 0 0 chr2 102998450 102998489 -150258094 + (TA)n Simple_repeat Simple_repeat 1 39 0 1490 188 7 4 chr2 102999662 102999938 -150256645 - AluSx SINE Alu -32 280 4 1318 185 15 8 chr2 102999998 103000265 -150256318 + MLT1D LTR MaLR 247 498 -7 331 235 7 103 chr2 103000280 103000416 -150256167 + L2 LINE L2 2850 2972 -342 328 226 0 0 chr2 103000475 103000537 -150256046 + L1MEc LINE L1 29 90 -6306 1148 125 6 0 chr2 103000545 103000713 -150255870 - AluSp SINE Alu -8 305 137 337 261 106 28 chr2 103001019 103001161 -150255422 + L2 LINE L2 3119 3271 -42 2065 134 0 3 chr2 103001777 103002083 -150254500 - AluSq SINE Alu -6 307 3 931 194 22 71 chr2 103002470 103002833 -150253750 + L1MD3 LINE L1 6034 7994 -1 1180 220 29 109 chr2 103002972 103003449 -150253134 - L1ME LINE L1 -340 5822 5384 843 221 0 7 chr2 103003549 103003694 -150252889 + AluSc SINE Alu 143 286 -23 393 22 0 0 chr2 103003711 103003757 -150252826 + (TG)n Simple_repeat Simple_repeat 1 46 0 181 326 69 56 chr2 103003762 103003906 -150252677 + L2 LINE L2 2464 2609 -705 818 200 32 0 chr2 103004289 103004444 -150252139 + FRAM SINE Alu 1 159 -17 1808 153 10 3 chr2 103005150 103005438 -150251145 + AluSx SINE Alu 5 294 -18 10100 106 2 6 chr2 103005665 103007070 -150249513 - HERVK9 LTR ERVK -3393 2523 1124 1082 163 0 0 chr2 103007783 103007936 -150248647 + FRAM SINE Alu 2 154 -12 1868 115 0 0 chr2 103008826 103009069 -150247514 - AluSq SINE Alu -70 243 1 604 264 13 25 chr2 103009072 103009231 -150247352 - MIR SINE MIR -100 162 6 28 29 0 0 chr2 103009283 103009318 -150247265 + AT_rich Low_complexity Low_complexity 1 35 0 685 91 0 40 chr2 103009318 103009417 -150247166 + L1P3 LINE L1 2 96 -6365 9470 143 17 76 chr2 103009418 103011312 -150245271 + L1P3 LINE L1 786 2567 -3894 490 176 0 0 chr2 103011412 103011497 -150245086 + AluSg/x SINE Alu 214 298 -12 631 228 41 23 chr2 103011497 103011668 -150244915 - MLT1D LTR MaLR -331 174 1 323 190 51 0 chr2 103011694 103011773 -150244810 - L2 LINE L2 -540 2774 2692 810 146 42 49 chr2 103011780 103011924 -150244659 + AluJo SINE Alu 3 145 -167 1599 119 4 4 chr2 103011924 103012150 -150244433 + AluSq SINE Alu 1 226 -87 349 286 107 39 chr2 103012211 103012547 -150244036 - L1ME LINE L1 -795 5351 4993 2417 85 0 0 chr2 103012556 103012850 -150243733 - AluSg SINE Alu -16 294 1 926 122 0 43 chr2 103013085 103013224 -150243359 - FLAM_C SINE Alu 0 133 1 1945 235 39 16 chr2 103013588 103014158 -150242425 - L1MC4 LINE L1 0 8042 7460 1010 100 8 0 chr2 103014613 103014743 -150241840 + AluSq SINE Alu 1 131 -181 929 117 41 0 chr2 103014747 103014892 -150241691 + L1MB4 LINE L1 6027 6177 -3 24 0 0 0 chr2 103014907 103014931 -150241652 + AT_rich Low_complexity Low_complexity 1 24 0 460 73 0 0 chr2 103014931 103014986 -150241597 + AluSq SINE Alu 120 174 -139 770 206 70 20 chr2 103015093 103015275 -150241308 - L1MC4a LINE L1 -812 6996 6802 1855 160 0 35 chr2 103015275 103015593 -150240990 - AluJb SINE Alu -5 307 1 770 206 70 20 chr2 103015593 103015609 -150240974 - L1MC4a LINE L1 -1006 6802 6788 1034 93 192 57 chr2 103015609 103015677 -150240906 - MER30 DNA MER1_type 0 230 173 2283 76 24 3 chr2 103015677 103015968 -150240615 - AluSx SINE Alu -15 297 1 1034 93 192 57 chr2 103015968 103015999 -150240584 - MER30 DNA MER1_type -57 173 148 294 95 0 0 chr2 103015999 103016041 -150240542 + (TG)n Simple_repeat Simple_repeat 2 43 0 1034 93 192 57 chr2 103016041 103016133 -150240450 - MER30 DNA MER1_type -82 148 12 1316 214 78 22 chr2 103016138 103016460 -150240123 - L1MC4 LINE L1 -1166 6876 6537 180 299 45 0 chr2 103016601 103016668 -150239915 + L2 LINE L2 2431 2500 -814 1758 114 11 11 chr2 103016756 103017020 -150239563 - L1MA6 LINE L1 0 6300 6037 925 83 33 0 chr2 103017023 103017143 -150239440 - AluSq/x SINE Alu -187 125 2 3395 103 25 0 chr2 103017143 103017627 -150238956 - L1MA6 LINE L1 -248 6052 5557 930 259 74 41 chr2 103017725 103018088 -150238495 - L2 LINE L2 -2 3311 2937 1431 94 11 0 chr2 103018229 103018420 -150238163 - AluSg1 SINE Alu -116 193 1 281 273 187 13 chr2 103018512 103018662 -150237921 - L2 LINE L2 -407 2907 2732 676 281 60 5 chr2 103018723 103018940 -150237643 - L2 LINE L2 -592 2722 2494 632 74 0 12 chr2 103018949 103019030 -150237553 + AluY SINE Alu 219 298 -13 1126 175 132 4 chr2 103019030 103019258 -150237325 + MLT1A1 LTR MaLR 109 365 0 714 259 145 29 chr2 103019261 103019605 -150236978 + L2 LINE L2 2910 3293 -20 1812 138 8 11 chr2 103020129 103020397 -150236186 + AluJb SINE Alu 26 292 -20 236 282 14 28 chr2 103020404 103020475 -150236108 - L2 LINE L2 -1864 1450 1381 21 0 0 0 chr2 103020752 103020773 -150235810 + AT_rich Low_complexity Low_complexity 1 21 0 345 212 85 1 chr2 103020795 103020920 -150235663 + L1ME2 LINE L1 5817 5949 -215 24 0 0 0 chr2 103021265 103021289 -150235294 + AT_rich Low_complexity Low_complexity 1 24 0 2451 74 0 0 chr2 103023351 103023650 -150232933 - AluY SINE Alu -12 299 1 2277 105 3 3 chr2 103023694 103024000 -150232583 - AluSx SINE Alu -6 306 1 2333 101 0 3 chr2 103025088 103025396 -150231187 + AluSq SINE Alu 1 307 -6 414 245 99 26 chr2 103026010 103026161 -150230422 - L2 LINE L2 -41 3272 3111 1455 158 21 0 chr2 103026207 103026448 -150230135 - AluJo SINE Alu -22 290 45 364 91 106 15 chr2 103026499 103026565 -150230018 - MER41A LTR ERV1 -91 463 392 399 266 177 66 chr2 103026828 103027178 -150229405 - L2 LINE L2 -1067 2247 1859 2456 60 0 3 chr2 103027319 103027621 -150228962 + AluY SINE Alu 1 301 -10 357 177 0 0 chr2 103027623 103027685 -150228898 + L1MEc LINE L1 1193 1254 -5142 1907 151 3 26 chr2 103027869 103028181 -150228402 + AluJb SINE Alu 1 305 -7 2420 68 0 56 chr2 103028183 103028506 -150228077 + AluY SINE Alu 3 307 -4 25702 87 19 6 chr2 103032190 103036472 -150220111 - L1PA7 LINE L1 -133 6021 1685 1045 274 144 36 chr2 103036849 103037466 -150219117 - L2 LINE L2 -1067 2247 1564 546 203 81 0 chr2 103037872 103038011 -150218572 + MLT1H LTR MaLR 12 203 -346 315 214 324 29 chr2 103038041 103038214 -150218369 + MLT1H LTR MaLR 331 554 -1 182 382 0 0 chr2 103039981 103040049 -150216534 + L2 LINE L2 2969 3036 -236 2048 83 58 7 chr2 103040216 103040493 -150216090 - AluSx SINE Alu -21 291 1 220 325 72 0 chr2 103040525 103040608 -150215975 + L2 LINE L2 3221 3309 -4 381 241 179 37 chr2 103040907 103041098 -150215485 - MIR SINE MIR -21 241 4 267 301 284 26 chr2 103041220 103041748 -150214835 + L2 LINE L2 1527 2190 -1124 677 272 92 25 chr2 103041900 103042139 -150214444 - MIR SINE MIR -3 259 5 1213 169 93 30 chr2 103042257 103042494 -150214089 + AluJb SINE Alu 17 268 -44 215 256 25 107 chr2 103042725 103042846 -150213737 + L2 LINE L2 3110 3220 -93 2299 86 0 3 chr2 103042855 103043158 -150213425 - AluY SINE Alu -9 302 1 1179 45 0 0 chr2 103043158 103043292 -150213291 - AluY SINE Alu -177 134 1 255 350 104 14 chr2 103043297 103043594 -150212989 + L2 LINE L2 2524 2847 -467 252 178 0 0 chr2 103043589 103043634 -150212949 + L2 LINE L2 3265 3309 -4 * 202 351 162 7 chr2 103043788 103043936 -150212647 + L2 LINE L2 2898 3068 -204 1480 178 98 4 chr2 103044054 103044329 -150212254 + AluJo SINE Alu 1 301 -11 2154 89 44 3 chr2 103044918 103045211 -150211372 + AluSx SINE Alu 8 312 0 23 0 0 0 chr2 103045211 103045234 -150211349 + AT_rich Low_complexity Low_complexity 1 23 0 273 29 0 0 chr2 103045234 103045268 -150211315 + (TA)n Simple_repeat Simple_repeat 1 34 0 279 0 0 0 chr2 103045793 103045824 -150210759 + (A)n Simple_repeat Simple_repeat 1 31 0 441 0 0 0 chr2 103045830 103045879 -150210704 + (TA)n Simple_repeat Simple_repeat 1 49 0 327 206 163 28 chr2 103045915 103046056 -150210527 + L1ME4a LINE L1 5944 6103 -18 988 136 0 0 chr2 103046096 103046228 -150210355 + FLAM_C SINE Alu 1 132 -1 1935 150 10 3 chr2 103047858 103048164 -150208419 - AluSx SINE Alu 0 312 5 390 257 110 0 chr2 103048313 103048422 -150208161 - L2 LINE L2 -1006 2308 2188 1013 295 66 56 chr2 103048471 103048986 -150207597 + LTR67 LTR ERVL 28 547 -10 740 284 53 41 chr2 103049083 103049448 -150207135 - L2 LINE L2 -1260 2054 1631 351 0 0 0 chr2 103049690 103049729 -150206854 + (TA)n Simple_repeat Simple_repeat 2 40 0 322 303 89 56 chr2 103049837 103050224 -150206359 - L1M4 LINE L1 -1221 4925 4421 2346 103 3 0 chr2 103050962 103051272 -150205311 - AluSp SINE Alu -2 311 1 1235 142 0 0 chr2 103051616 103051792 -150204791 - AluJb SINE Alu -17 295 120 38 47 0 35 chr2 103053245 103053330 -150203253 + AT_rich Low_complexity Low_complexity 1 82 0 301 296 48 0 chr2 103053864 103054023 -150202560 + L1 LINE L1 4167 4334 -1812 225 342 8 92 chr2 103054582 103054702 -150201881 - L2 LINE L2 -1 3271 3162 2107 132 10 0 chr2 103054936 103055232 -150201351 + AluSx SINE Alu 1 299 -13 2204 111 0 0 chr2 103055431 103055729 -150200854 + AluSx SINE Alu 1 298 -14 205 152 0 43 chr2 103056542 103056588 -150199995 + A-rich Low_complexity Low_complexity 2 45 0 21 0 0 0 chr2 103056851 103056872 -150199711 + AT_rich Low_complexity Low_complexity 1 21 0 2376 86 0 0 chr2 103057420 103057721 -150198862 - AluSx SINE Alu -11 301 1 1059 90 0 0 chr2 103057722 103057856 -150198727 - AluSq/x SINE Alu -179 134 1 2159 178 81 13 chr2 103057890 103058361 -150198222 - L1MC4a LINE L1 -5 7803 7301 2999 143 25 0 chr2 103058474 103058958 -150197625 - L1MA6 LINE L1 -248 6052 5557 840 260 71 46 chr2 103059057 103059423 -150197160 - L2 LINE L2 -2 3311 2937 262 329 77 39 chr2 103059413 103059568 -150197015 + L2 LINE L2 2701 2861 -453 * 246 360 122 6 chr2 103059986 103060150 -150196433 + MIR SINE MIR 47 229 -33 2449 64 0 10 chr2 103060243 103060540 -150196043 - AluSc SINE Alu -15 294 1 232 308 15 0 chr2 103060703 103060768 -150195815 - L2 LINE L2 -2 3311 3246 324 260 110 59 chr2 103061058 103061412 -150195171 - L1MC5 LINE L1 -202 7759 7388 2494 56 0 0 chr2 103062950 103063255 -150193328 + AluY SINE Alu 2 306 -5 418 250 164 0 chr2 103063267 103063371 -150193212 + FLAM_A SINE Alu 1 121 -12 764 302 103 38 chr2 103063420 103063937 -150192646 - L2 LINE L2 -1 3312 2781 2202 99 3 0 chr2 103063967 103064260 -150192323 + AluSx SINE Alu 5 298 -14 1800 126 94 18 chr2 103064306 103064647 -150191936 - L1MC3 LINE L1 0 7785 7419 2420 159 198 16 chr2 103064664 103065219 -150191364 - L1MC3 LINE L1 -681 7104 6449 256 280 106 15 chr2 103065219 103065351 -150191232 - L2 LINE L2 -568 2746 2603 2043 167 12 9 chr2 103065621 103065957 -150190626 + MER1B DNA MER1_type 1 337 -2 335 261 204 13 chr2 103066000 103066157 -150190426 - MIR SINE MIR 0 262 76 339 254 24 122 chr2 103066343 103066548 -150190035 + MIR3 SINE MIR 20 204 -4 1788 136 0 4 chr2 103067008 103067273 -150189310 - AluSg SINE Alu -11 299 36 377 281 117 0 chr2 103067702 103067873 -150188710 - MIR SINE MIR -54 208 17 866 283 27 5 chr2 103068131 103068220 -150188363 + MER58A DNA MER1_type 1 86 -2334 2345 86 0 10 chr2 103068220 103068522 -150188061 + AluY SINE Alu 1 299 -12 866 283 27 5 chr2 103068522 103068651 -150187932 + MER58A DNA MER1_type 86 224 0 1929 123 7 14 chr2 103069374 103069658 -150186925 - AluSx SINE Alu -11 301 20 4024 152 73 6 chr2 103069683 103070381 -150186202 - L1MC2 LINE L1 -9 6335 5591 1107 126 17 6 chr2 103070428 103070603 -150185980 - L1MB3 LINE L1 -2 6181 6005 1180 181 0 15 chr2 103070603 103070807 -150185776 + AluJo SINE Alu 87 287 -25 318 173 0 0 chr2 103070815 103070867 -150185716 - L1MB4 LINE L1 -164 6016 5965 1772 190 7 0 chr2 103070957 103071252 -150185331 + AluJo SINE Alu 3 299 -13 1302 116 42 56 chr2 103071392 103071607 -150184976 + L1PA10 LINE L1 5952 6163 -5 2355 92 0 0 chr2 103071687 103071982 -150184601 - AluSc SINE Alu -14 295 1 400 310 132 61 chr2 103071996 103072389 -150184194 + L2 LINE L2 2256 2676 -638 336 125 71 0 chr2 103072806 103072862 -150183721 - HY1 scRNA scRNA -2 110 51 907 147 83 0 chr2 103072959 103073116 -150183467 - L1PA8 LINE L1 -13 6159 5990 373 89 71 0 chr2 103073781 103073837 -150182746 - HY1 scRNA scRNA -2 110 51 4478 67 88 2 chr2 103073934 103074516 -150182067 - L1PA8 LINE L1 -13 6159 5528 2745 64 13 0 chr2 103074516 103075025 -150181558 + L1PA8 LINE L1 5027 5539 -592 2303 101 0 3 chr2 103075411 103075709 -150180874 + AluSg SINE Alu 2 298 -12 1783 99 21 0 chr2 103076962 103077204 -150179379 - L1MA5A LINE L1 -1 6296 6050 2127 105 14 3 chr2 103077456 103077751 -150178832 + AluSx SINE Alu 1 298 -14 1989 137 10 22 chr2 103078001 103078315 -150178268 + AluSx SINE Alu 1 310 -2 1455 235 15 43 chr2 103078325 103078430 -150178153 - L1M4 LINE L1 -3216 2930 2824 1692 169 29 26 chr2 103078430 103078738 -150177845 - AluJo SINE Alu -3 309 1 1455 235 15 43 chr2 103078738 103078960 -150177623 - L1M4 LINE L1 -3322 2824 2597 1486 153 18 79 chr2 103078960 103079132 -150177451 - MER33 DNA MER1_type -2261 324 182 2200 116 0 3 chr2 103079132 103079433 -150177150 - AluSx SINE Alu -12 300 1 1486 153 18 79 chr2 103079433 103079601 -150176982 - MER33 DNA MER1_type -2403 182 5 666 225 6 19 chr2 103079445 103079605 -150176978 - MER33 DNA MER1_type -166 158 1 * 1455 235 15 43 chr2 103079605 103079740 -150176843 - L1M4 LINE L1 -3553 2593 2476 3141 148 8 13 chr2 103079751 103080286 -150176297 + L1P LINE L1 3793 4324 -1822 1253 135 5 0 chr2 103080288 103080480 -150176103 - L1P LINE L1 -2347 3799 3607 2072 122 7 7 chr2 103080938 103081234 -150175349 - AluSq SINE Alu -17 296 1 972 188 0 30 chr2 103081244 103081441 -150175142 - L1MB8 LINE L1 0 6178 5988 288 356 119 22 chr2 103081535 103082290 -150174293 - L2 LINE L2 -1544 1770 943 263 339 23 15 chr2 103082885 103083015 -150173568 - L1ME LINE L1 -555 5609 5479 275 178 48 116 chr2 103083045 103083191 -150173392 - L1ME LINE L1 -743 5403 5268 2262 103 0 7 chr2 103083263 103083565 -150173018 - AluY SINE Alu -11 300 1 312 137 0 0 chr2 103083589 103083640 -150172943 + (A)n Simple_repeat Simple_repeat 1 51 0 608 118 0 0 chr2 103083823 103083916 -150172667 + L1P LINE L1 4232 4324 -1822 1242 135 5 0 chr2 103083918 103084110 -150172473 - L1P LINE L1 -2347 3799 3607 296 167 0 0 chr2 103084584 103084632 -150171951 - MER45 DNA AcHobo -49 1532 1485 2150 125 0 0 chr2 103084632 103084969 -150171614 + AluSx SINE Alu 6 342 0 571 299 56 8 chr2 103085601 103085835 -150170748 + L1M4 LINE L1 2458 2702 -3444 303 277 12 0 chr2 103085838 103085921 -150170662 + L1M4 LINE L1 5191 5274 -872 656 79 30 40 chr2 103085921 103086022 -150170561 + AluSp SINE Alu 25 124 -189 1921 144 3 17 chr2 103086267 103086558 -150170025 - AluJb SINE Alu -25 287 1 301 281 91 33 chr2 103086582 103086703 -150169880 - L2 LINE L2 -8 3264 3137 1689 184 3 13 chr2 103087598 103087897 -150168686 - AluJo SINE Alu -16 296 1 1249 218 51 20 chr2 103088102 103088583 -150168000 - MLT1E LTR MaLR -1 592 3 843 169 35 7 chr2 103089622 103089764 -150166819 + FRAM SINE Alu 20 165 -11 1624 131 11 40 chr2 103090326 103090601 -150165982 + AluJo SINE Alu 1 267 -45 378 282 51 26 chr2 103090907 103091063 -150165520 + MER90-int LTR ERV1 1892 2051 -2596 409 360 50 17 chr2 103091105 103091405 -150165178 + MER90-int LTR ERV1 6322 6631 -170 2476 176 77 14 chr2 103091571 103092089 -150164494 + MER90 LTR ERV1 1 551 -63 5964 130 30 50 chr2 103092482 103092669 -150163914 - L1MA3 LINE L1 0 7724 7535 1643 157 4 11 chr2 103092669 103092930 -150163653 + AluJo SINE Alu 38 296 -16 5964 130 30 50 chr2 103092930 103094025 -150162558 - L1MA3 LINE L1 -189 7535 6460 183 80 0 0 chr2 103094025 103094050 -150162533 + (TTCTC)n Simple_repeat Simple_repeat 3 27 0 1286 182 8 8 chr2 103094066 103094302 -150162281 - AluJo SINE Alu -3 309 74 3269 142 19 2 chr2 103094304 103094841 -150161742 - L1MA3 LINE L1 -1095 6470 5925 1969 97 0 4 chr2 103094843 103095101 -150161482 - AluSp SINE Alu 0 313 57 4525 127 191 33 chr2 103095101 103096084 -150160499 + MER11B LTR ERVK 3 1231 -5 362 160 27 12 chr2 103096087 103096169 -150160414 - AluS SINE Alu -239 64 1 7339 186 30 26 chr2 103096169 103096564 -150160019 - L1MA3 LINE L1 -1650 5915 5523 1986 128 10 10 chr2 103096564 103096862 -150159721 - AluSx SINE Alu -14 298 1 7339 186 30 26 chr2 103096862 103097181 -150159402 - L1MA3 LINE L1 -2042 5523 5207 1992 156 0 19 chr2 103097181 103097496 -150159087 - AluSx SINE Alu -3 309 1 7339 186 30 26 chr2 103097496 103097621 -150158962 - L1MA3 LINE L1 -2358 5207 5084 1760 161 46 67 chr2 103097621 103097993 -150158590 - THE1B LTR MaLR 0 364 1 7339 186 30 26 chr2 103097993 103099110 -150157473 - L1MA3 LINE L1 -2481 5084 3340 261 75 0 0 chr2 103099125 103099165 -150157418 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 1245 68 0 0 chr2 103099165 103099313 -150157270 - AluY SINE Alu -32 279 132 10347 179 25 31 chr2 103099313 103100602 -150155981 - L1MA3 LINE L1 -4221 3344 2049 2451 121 113 15 chr2 103100602 103100992 -150155591 - MSTA LTR MaLR 0 428 1 10347 179 25 31 chr2 103100992 103102162 -150154421 - L1MA3 LINE L1 -5516 2049 221 2753 144 113 11 chr2 103102168 103102620 -150153963 - MER1A DNA MER1_type 0 529 32 288 0 0 0 chr2 103102624 103102656 -150153927 + (T)n Simple_repeat Simple_repeat 1 32 0 26 64 0 0 chr2 103102672 103102719 -150153864 + AT_rich Low_complexity Low_complexity 1 47 0 335 289 96 20 chr2 103102789 103102986 -150153597 - L1ME4a LINE L1 -171 5950 5739 1090 183 30 0 chr2 103103011 103103213 -150153370 - L1MA3 LINE L1 -7342 223 16 2493 102 51 20 chr2 103103527 103103880 -150152703 + THE1B LTR MaLR 1 364 0 1765 139 20 34 chr2 103104365 103104550 -150152033 - AluJb SINE Alu -22 290 109 2338 116 41 41 chr2 103104550 103104913 -150151670 - THE1B LTR MaLR 0 364 2 1765 139 20 34 chr2 103104913 103105021 -150151562 - AluJb SINE Alu -203 109 1 1020 139 0 0 chr2 103105499 103105671 -150150912 + (TGGA)n Simple_repeat Simple_repeat 4 175 0 1999 192 14 10 chr2 103105681 103106143 -150150440 + MER74A LTR ERVL 5 547 -11 1025 74 7 0 chr2 103106151 103106299 -150150284 + (TAGA)n Simple_repeat Simple_repeat 4 152 0 2113 137 0 0 chr2 103106787 103107080 -150149503 + AluSx SINE Alu 3 295 -17 1342 106 8 91 chr2 103107622 103107886 -150148697 + L1MA7 LINE L1 6050 6291 0 466 254 108 14 chr2 103108406 103108769 -150147814 - L1ME LINE L1 -2055 4025 3600 255 208 0 0 chr2 103108771 103108824 -150147759 - L1ME LINE L1 -3161 2919 2867 25 75 0 0 chr2 103108826 103108879 -150147704 + AT_rich Low_complexity Low_complexity 1 53 0 2102 121 10 22 chr2 103108879 103109193 -150147390 + AluSx SINE Alu 1 310 -2 1120 249 19 9 chr2 103109203 103109308 -150147275 - L1ME LINE L1 -3216 2864 2761 1692 169 29 26 chr2 103109308 103109616 -150146967 - AluJo SINE Alu -3 309 1 1120 249 19 9 chr2 103109616 103109835 -150146748 - L1ME LINE L1 -3319 2761 2537 970 109 30 6 chr2 103109838 103110003 -150146580 - Charlie5 DNA MER1_type -27 2585 2417 2218 100 0 29 chr2 103110010 103110319 -150146264 - AluSx SINE Alu -12 300 1 2044 201 76 11 chr2 103110319 103110766 -150145817 + L1ME3 LINE L1 5581 6056 -106 1006 226 35 60 chr2 103110754 103111121 -150145462 - L1ME LINE L1 -5175 895 538 * 240 35 0 0 chr2 103111133 103111162 -150145421 + (GGAA)n Simple_repeat Simple_repeat 1 29 0 2915 197 26 7 chr2 103111184 103111767 -150144816 + L1PA16 LINE L1 1980 2573 -4276 * 15640 23 3 0 chr2 103111764 103113589 -150142994 - L1PA4 LINE L1 -1911 4235 2406 10086 37 3 8 chr2 103113589 103115552 -150141031 + L1PA4 LINE L1 4236 6194 0 9368 204 112 17 chr2 103115695 103116613 -150139970 + L1PA16 LINE L1 2575 3404 -3465 1893 143 31 0 chr2 103116613 103116899 -150139684 + AluSx SINE Alu 3 297 -15 9368 204 112 17 chr2 103116899 103119536 -150137047 + L1PA16 LINE L1 3404 6485 -384 12787 77 2 16 chr2 103119536 103121557 -150135026 + L1PA7 LINE L1 3768 5772 -382 2416 86 0 3 chr2 103121557 103121861 -150134722 + AluY SINE Alu 1 303 -8 12787 77 2 16 chr2 103121861 103122237 -150134346 + L1PA7 LINE L1 5772 6152 -2 2834 104 15 2 chr2 103122238 103122631 -150133952 + L1PA16 LINE L1 6472 6869 0 2083 190 38 89 chr2 103122631 103122725 -150133858 + MER21-int LTR ERV1 1092 1189 -3002 2084 108 0 82 chr2 103122725 103123066 -150133517 + AluSq SINE Alu 1 313 0 2083 190 38 89 chr2 103123066 103123546 -150133037 + MER21-int LTR ERV1 1189 1637 -2554 606 235 24 48 chr2 103123629 103123749 -150132834 + MER21-int LTR ERV1 1646 1762 -2429 2217 111 0 0 chr2 103123749 103124037 -150132546 - AluSx SINE Alu -24 288 1 606 235 24 48 chr2 103124037 103124082 -150132501 + MER21-int LTR ERV1 1762 1807 -2384 693 172 0 73 chr2 103124118 103124269 -150132314 + MER21-int LTR ERV1 1657 1796 -2395 208 135 0 0 chr2 103124492 103124529 -150132054 + (T)n Simple_repeat Simple_repeat 1 37 0 2190 153 134 15 chr2 103124540 103124951 -150131632 + LTR46 LTR ERV1 1 460 0 1910 172 0 3 chr2 103125033 103125330 -150131253 - AluJb SINE Alu -16 296 1 2292 80 7 26 chr2 103125575 103125877 -150130706 + AluSp SINE Alu 1 296 -17 1266 264 71 35 chr2 103126119 103126525 -150130058 + LTR16C LTR ERVL 71 491 0 202 267 0 0 chr2 103128733 103128778 -150127805 + (CTCA)n Simple_repeat Simple_repeat 2 46 0 272 152 22 0 chr2 103128778 103128824 -150127759 - L2 LINE L2 0 3313 3267 283 322 62 47 chr2 103129083 103129341 -150127242 - L2 LINE L2 -785 2529 2268 450 94 0 0 chr2 103129422 103129486 -150127097 + (TAGA)n Simple_repeat Simple_repeat 2 65 0 1007 161 30 50 chr2 103129486 103129685 -150126898 - AluJb SINE Alu -22 290 96 2378 84 3 3 chr2 103130771 103131070 -150125513 + AluSq SINE Alu 1 299 -14 798 142 0 64 chr2 103131429 103131570 -150125013 + FLAM_A SINE Alu 2 133 0 2096 124 0 0 chr2 103131782 103132064 -150124519 + AluSx SINE Alu 15 296 -16 305 323 24 30 chr2 103132098 103132262 -150124321 + MIR3 SINE MIR 32 194 -14 1758 154 7 7 chr2 103133033 103133313 -150123270 - AluJo SINE Alu -12 300 21 1082 127 51 41 chr2 103133380 103133577 -150123006 - L1PA16 LINE L1 0 6166 5968 7800 19 0 1 chr2 103133655 103134721 -150121862 + L1PA3 LINE L1 5123 6187 0 1906 162 3 13 chr2 103135081 103135383 -150121200 + AluJb SINE Alu 1 299 -13 2027 146 7 0 chr2 103135423 103135731 -150120852 + AluSp SINE Alu 1 310 -3 845 308 75 6 chr2 103135731 103136092 -150120491 + L2 LINE L2 2545 2930 -384 2083 85 10 14 chr2 103136192 103136485 -150120098 - AluY SINE Alu -15 296 5 396 282 10 0 chr2 103136489 103136592 -150119991 + L1MC4a LINE L1 5440 5543 -2265 1814 253 143 40 chr2 103136606 103137624 -150118959 + L1MC4a LINE L1 5690 6812 -996 407 78 0 0 chr2 103137663 103137714 -150118869 - AluY SINE Alu -20 292 242 1615 81 0 0 chr2 103137714 103137912 -150118671 - AluY SINE Alu -113 198 1 1763 92 4 0 chr2 103137942 103138169 -150118414 - AluY SINE Alu -83 228 1 266 268 0 0 chr2 103138198 103138254 -150118329 + polypyrimidine Low_complexity Low_complexity 3 58 0 540 220 28 50 chr2 103138254 103138395 -150118188 + L2 LINE L2 3176 3313 0 237 262 0 16 chr2 103138511 103138572 -150118011 + MER5A DNA MER1_type 9 68 -121 1002 98 0 14 chr2 103138581 103138724 -150117859 + AluY SINE Alu 1 141 -170 385 276 31 88 chr2 103139014 103139084 -150117499 + MER5A DNA MER1_type 9 81 -108 2455 75 0 10 chr2 103139084 103139389 -150117194 + AluY SINE Alu 1 302 -9 385 276 31 88 chr2 103139389 103139510 -150117073 + MER5A DNA MER1_type 81 189 0 1082 163 0 0 chr2 103140999 103141152 -150115431 - FRAM SINE Alu -12 154 2 823 257 95 5 chr2 103143162 103143384 -150113199 - MIR SINE MIR -10 252 11 441 218 61 54 chr2 103144511 103144658 -150111925 + MIR SINE MIR 86 233 -29 1625 199 26 101 chr2 103145211 103145745 -150110838 + L1ME LINE L1 5329 5822 -340 846 187 18 50 chr2 103145885 103146104 -150110479 - L1MD3 LINE L1 -1 7994 7783 2256 47 14 14 chr2 103147767 103148064 -150108519 + AluY SINE Alu 1 297 -14 1511 155 169 3 chr2 103148113 103148397 -150108186 + MER7A DNA MER2_type 2 330 -16 1628 149 3 17 chr2 103148404 103148692 -150107891 - AluJb SINE Alu -11 301 18 1220 281 12 124 chr2 103150315 103150653 -150105930 - AluSx SINE Alu -2 300 1 2045 137 0 10 chr2 103150784 103151083 -150105500 + AluSx SINE Alu 1 296 -16 300 87 0 0 chr2 103151284 103151330 -150105253 - AluSq SINE Alu 0 302 257 1334 125 10 10 chr2 103151330 103151522 -150105061 - AluSq SINE Alu -121 192 1 2381 89 0 6 chr2 103152600 103152913 -150103670 - AluSx SINE Alu -1 311 1 1904 148 7 0 chr2 103152944 103153234 -150103349 - AluJb SINE Alu -20 292 1 732 284 139 17 chr2 103153448 103153793 -150102790 + L3 LINE CR1 1010 1396 -181 2031 104 26 42 chr2 103153917 103154225 -150102358 - AluSx SINE Alu -9 303 1 1610 159 7 36 chr2 103154517 103154826 -150101757 + AluJo SINE Alu 1 300 -12 2400 84 0 3 chr2 103154837 103155147 -150101436 + AluSc SINE Alu 1 309 0 1967 142 3 7 chr2 103155546 103155849 -150100734 + AluSx SINE Alu 1 302 -10 343 264 45 87 chr2 103156341 103156583 -150100000 + MER102b DNA MER1_type 84 315 -26 641 144 0 0 chr2 103156880 103156977 -150099606 - AluSg/x SINE Alu -1 308 212 1295 172 108 3 chr2 103157077 103157418 -150099165 + L1MC3 LINE L1 7223 7785 0 2285 108 0 0 chr2 103157430 103157726 -150098857 + AluSx SINE Alu 1 296 -16 4197 213 66 41 chr2 103157774 103158242 -150098341 + L1MD2 LINE L1 4367 4822 -1537 2166 118 3 3 chr2 103158242 103158546 -150098037 + AluSx SINE Alu 3 306 -6 4197 213 66 41 chr2 103158546 103159884 -150096699 + L1MD2 LINE L1 4822 6224 -135 868 127 14 21 chr2 103159884 103160026 -150096557 + AluJo SINE Alu 1 141 -171 2312 94 13 3 chr2 103160028 103160335 -150096248 + AluSg SINE Alu 1 310 0 569 239 136 0 chr2 103160521 103160676 -150095907 - MER58A DNA MER1_type -48 176 1 2220 80 18 0 chr2 103161240 103161526 -150095057 + AluY SINE Alu 1 291 -20 3770 151 116 23 chr2 103161548 103161847 -150094736 - L1MA6 LINE L1 0 6300 6030 2089 95 39 3 chr2 103161847 103162132 -150094451 - AluSx SINE Alu -17 295 1 3770 151 116 23 chr2 103162132 103162585 -150093998 - L1MA6 LINE L1 -270 6030 5478 228 133 67 33 chr2 103162573 103162633 -150093950 - L1PA16 LINE L1 0 6166 6105 * 528 179 188 51 chr2 103162649 103162766 -150093817 - FLAM_C SINE Alu 0 133 1 2045 160 33 28 chr2 103162937 103163296 -150093287 - THE1B LTR MaLR -2 430 1 541 100 0 0 chr2 103163296 103163376 -150093207 - THE1B-int LTR MaLR 0 1580 1501 1216 69 6 6 chr2 103163376 103163535 -150093048 - AluY SINE Alu -152 159 1 1105 161 6 0 chr2 103163546 103163714 -150092869 - THE1B LTR MaLR -192 172 4 318 211 211 31 chr2 103163717 103163845 -150092738 + L2 LINE L2 2572 2722 -592 2064 121 7 0 chr2 103164389 103164686 -150091897 - AluSx SINE Alu -13 299 1 297 146 18 0 chr2 103164991 103165046 -150091537 + MSTC LTR MaLR 373 428 0 3868 132 9 46 chr2 103165049 103165178 -150091405 + L1MB1 LINE L1 5495 5627 -541 2018 113 21 3 chr2 103165178 103165469 -150091114 + AluSq SINE Alu 3 298 -15 3868 132 9 46 chr2 103165469 103165993 -150090590 + L1MB1 LINE L1 5627 6124 -44 2343 59 21 0 chr2 103165999 103166289 -150090294 + L1PA13 LINE L1 5865 6160 -3 329 276 60 94 chr2 103166291 103167237 -150089346 - L1M4 LINE L1 -3105 3041 2128 1864 140 0 14 chr2 103167338 103167624 -150088959 - AluSx SINE Alu -30 282 1 584 203 152 25 chr2 103167742 103167900 -150088683 + MER5A DNA MER1_type 9 186 -3 2022 133 14 3 chr2 103167930 103168223 -150088360 + AluJb SINE Alu 1 296 -16 272 216 10 41 chr2 103168316 103168413 -150088170 + C-rich Low_complexity Low_complexity 2 95 0 480 161 0 0 chr2 103168513 103168600 -150087983 + L1M4 LINE L1 5219 5305 -841 2167 124 16 0 chr2 103168604 103168911 -150087672 + AluSx SINE Alu 1 312 0 1686 199 0 13 chr2 103168926 103169242 -150087341 + AluJo SINE Alu 1 312 0 224 259 35 71 chr2 103169425 103169510 -150087073 + L2 LINE L2 3230 3311 -2 1740 181 147 19 chr2 103169801 103170264 -150086319 + Charlie1b DNA MER1_type 1 522 -1 1906 134 21 0 chr2 103170796 103171087 -150085496 + AluSx SINE Alu 1 297 -15 207 0 0 0 chr2 103171925 103171948 -150084635 + (CAA)n Simple_repeat Simple_repeat 2 24 0 739 120 24 48 chr2 103172200 103172325 -150084258 + FLAM_A SINE Alu 17 138 -4 2208 56 16 39 chr2 103172547 103172853 -150083730 + AluSp SINE Alu 1 299 -14 459 134 0 0 chr2 103172855 103172937 -150083646 + (TA)n Simple_repeat Simple_repeat 1 82 0 1210 158 0 5 chr2 103173043 103173227 -150083356 - AluSx SINE Alu -129 183 1 2352 82 3 3 chr2 103173291 103173594 -150082989 + AluY SINE Alu 1 303 -8 36 40 0 0 chr2 103175227 103175277 -150081306 + AT_rich Low_complexity Low_complexity 1 50 0 607 140 37 118 chr2 103175306 103175442 -150081141 + AluJb SINE Alu 1 125 -187 1700 234 192 4 chr2 103175463 103176005 -150080578 - L1MC4 LINE L1 -41 8001 7358 1974 166 0 0 chr2 103176044 103176346 -150080237 + AluJo SINE Alu 1 302 -10 1436 273 25 64 chr2 103177263 103177873 -150078710 + L1M4b LINE L1 10 717 -6142 965 89 8 0 chr2 103177878 103178002 -150078581 + AluSc SINE Alu 1 125 -184 616 254 149 22 chr2 103178008 103178160 -150078423 + L1M4b LINE L1 738 869 -5990 1972 142 3 0 chr2 103178160 103178448 -150078135 + AluSx SINE Alu 1 289 -23 616 254 149 22 chr2 103178448 103178571 -150078012 + L1M4b LINE L1 869 1048 -5811 894 146 0 0 chr2 103178572 103178709 -150077874 + FLAM_C SINE Alu 1 137 -6 1952 197 66 80 chr2 103178710 103179295 -150077288 + L1M4b LINE L1 1046 2010 -4868 2279 80 3 6 chr2 103179295 103179606 -150076977 + AluY SINE Alu 1 310 -1 1952 197 66 80 chr2 103179606 103179740 -150076843 + L1M4b LINE L1 2010 2144 -4734 1464 165 28 31 chr2 103179883 103180174 -150076409 + AluJo SINE Alu 1 290 -22 442 153 35 24 chr2 103180466 103180551 -150076032 + L1M4 LINE L1 5401 5486 -698 1517 101 5 5 chr2 103180551 103180758 -150075825 + AluSg/x SINE Alu 93 299 -11 1443 171 0 16 chr2 103180758 103181015 -150075568 + MER2 DNA MER2_type 90 342 -3 1014 163 20 13 chr2 103181645 103181798 -150074785 - FRAM SINE Alu -12 154 1 634 189 4 47 chr2 103181927 103182069 -150074514 + FLAM_C SINE Alu 2 141 -2 2071 115 3 3 chr2 103182098 103182410 -150074173 - AluSp SINE Alu -1 312 1 263 297 112 31 chr2 103182445 103182704 -150073879 - L1ME4a LINE L1 -2 6119 5840 1832 130 0 4 chr2 103182768 103183044 -150073539 - AluSx SINE Alu -4 308 34 493 194 0 0 chr2 103183519 103183612 -150072971 + AluJ/FLAM SINE Alu 2 94 -218 437 141 113 169 chr2 103183613 103183690 -150072893 + AluJo SINE Alu 2 69 -243 1613 158 10 34 chr2 103183690 103183987 -150072596 + AluJo SINE Alu 1 290 -22 437 141 113 169 chr2 103183987 103184051 -150072532 + AluJo SINE Alu 69 135 -177 1027 182 0 0 chr2 103184080 103184261 -150072322 + AluJo SINE Alu 122 302 -10 357 176 15 0 chr2 103184434 103184502 -150072081 - MLT1D LTR MaLR -7 498 430 542 189 184 79 chr2 103184529 103184757 -150071826 - MLT1D LTR MaLR -213 292 41 355 135 0 0 chr2 103184817 103184869 -150071714 + Alu SINE Alu 1 52 -256 828 129 0 23 chr2 103184871 103185003 -150071580 + AluJo/FRAM SINE Alu 166 294 -18 422 208 131 39 chr2 103185168 103185298 -150071285 - MIR SINE MIR -32 230 89 1934 146 10 0 chr2 103185304 103185606 -150070977 + AluSx SINE Alu 5 309 -3 793 98 0 0 chr2 103185629 103185731 -150070852 - AluSq/x SINE Alu -209 103 2 195 42 0 0 chr2 103185747 103185771 -150070812 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 346 111 0 0 chr2 103185773 103185818 -150070765 - AluY SINE Alu -18 284 240 1577 151 8 8 chr2 103185901 103186166 -150070417 - AluJb SINE Alu -19 293 29 270 147 39 39 chr2 103186194 103186283 -150070300 + T-rich Low_complexity Low_complexity 3 94 -10 2192 67 32 0 chr2 103186283 103186566 -150070017 + AluY SINE Alu 1 292 -19 270 147 39 39 chr2 103186566 103186578 -150070005 + T-rich Low_complexity Low_complexity 93 104 0 252 86 0 0 chr2 103186672 103186707 -150069876 + (CA)n Simple_repeat Simple_repeat 2 36 0 25 0 0 0 chr2 103186797 103186822 -150069761 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr2 103187923 103187951 -150068632 + AT_rich Low_complexity Low_complexity 1 28 0 387 239 7 14 chr2 103188141 103188279 -150068304 + GA-rich Low_complexity Low_complexity 4 140 0 474 231 141 32 chr2 103188377 103188533 -150068050 - MER58A DNA MER1_type -48 176 4 1853 69 19 8 chr2 103189019 103189280 -150067303 - AluY SINE Alu -47 264 1 608 264 12 6 chr2 103189282 103189445 -150067138 - L1 LINE L1 -1196 4950 4787 288 0 0 0 chr2 103189465 103189497 -150067086 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2029 136 0 0 chr2 103189503 103189797 -150066786 - AluSx SINE Alu -18 294 1 378 190 178 31 chr2 103189839 103190002 -150066581 - L1MC5 LINE L1 -48 7913 7727 24 77 0 0 chr2 103190004 103190056 -150066527 + AT_rich Low_complexity Low_complexity 1 52 0 1936 128 7 13 chr2 103190368 103190672 -150065911 + AluSx SINE Alu 1 302 -10 1726 145 24 20 chr2 103190723 103191020 -150065563 + AluJb SINE Alu 1 298 -14 26 74 0 0 chr2 103191451 103191505 -150065078 + AT_rich Low_complexity Low_complexity 1 54 0 1946 86 100 0 chr2 103191650 103191930 -150064653 - AluY SINE Alu -3 308 1 1855 164 0 3 chr2 103192055 103192367 -150064216 - AluJo SINE Alu -1 311 1 327 192 37 8 chr2 103192513 103192654 -150063929 - MER5A DNA MER1_type -79 110 9 306 145 50 57 chr2 103193946 103194036 -150062547 - MLT1H1 LTR MaLR 0 555 416 394 199 216 34 chr2 103194037 103194291 -150062292 - MLT1H1 LTR MaLR -247 308 10 371 200 110 0 chr2 103194606 103194706 -150061877 + Charlie2a DNA MER1_type 1120 1230 -1632 5770 134 80 5 chr2 103194725 103195959 -150060624 - L1MA6 LINE L1 0 6300 4958 542 117 0 0 chr2 103196107 103196184 -150060399 + AluJ/FLAM SINE Alu 2 78 -234 2506 190 81 53 chr2 103196198 103196749 -150059834 - L1ME1 LINE L1 -199 5967 5433 1971 125 3 13 chr2 103196749 103197062 -150059521 - AluSx SINE Alu -2 310 1 2506 190 81 53 chr2 103197062 103197253 -150059330 - L1ME1 LINE L1 -733 5433 5249 2181 112 3 0 chr2 103197253 103197557 -150059026 - AluSp SINE Alu -8 305 1 2506 190 81 53 chr2 103197557 103197586 -150058997 - L1ME1 LINE L1 -917 5249 5222 1296 151 211 16 chr2 103197586 103197837 -150058746 - AluSx SINE Alu -2 300 1 719 255 20 0 chr2 103197903 103198056 -150058527 - AluJb SINE Alu -28 284 129 222 189 0 0 chr2 103198056 103198093 -150058490 + polypyrimidine Low_complexity Low_complexity 2 38 0 1807 124 7 19 chr2 103198294 103198601 -150057982 - AluSq SINE Alu -10 303 1 912 188 0 30 chr2 103198611 103198808 -150057775 - L1MB8 LINE L1 0 6178 5988 249 324 148 26 chr2 103198902 103199328 -150057255 - L2 LINE L2 -1544 1770 1293 2063 105 10 7 chr2 103199477 103199781 -150056802 - AluSq SINE Alu 0 313 9 2123 79 0 79 chr2 103200032 103200362 -150056221 + AluSg SINE Alu 1 304 -6 748 199 80 93 chr2 103201232 103201399 -150055184 + Charlie4a DNA MER1_type 39 202 -1759 2023 111 16 7 chr2 103201399 103201706 -150054877 - AluSg SINE Alu 0 310 1 748 199 80 93 chr2 103201706 103201849 -150054734 + Charlie4a DNA MER1_type 202 345 -163 2274 78 3 3 chr2 103203407 103203703 -150052880 + AluSc SINE Alu 1 296 -13 264 225 54 45 chr2 103204256 103204367 -150052216 + AluY SINE Alu 187 298 -3 1950 126 7 3 chr2 103204521 103204814 -150051769 - AluJb SINE Alu -13 299 6 2278 90 3 0 chr2 103205739 103206040 -150050543 - AluSc SINE Alu -7 302 1 267 254 0 17 chr2 103206050 103206109 -150050474 - MIR SINE MIR -65 143 86 1001 263 157 30 chr2 103206120 103206546 -150050037 - MER45C DNA AcHobo -1 952 473 770 268 132 11 chr2 103206531 103206811 -150049772 - MER45C DNA AcHobo -582 371 58 * 2182 82 3 20 chr2 103207052 103207357 -150049226 + AluSp SINE Alu 1 300 -13 1958 142 3 3 chr2 103207519 103207828 -150048755 - AluSx SINE Alu -3 309 1 883 220 42 5 chr2 103208115 103208306 -150048277 + MIR SINE MIR 31 228 -34 2003 113 0 7 chr2 103208992 103209274 -150047309 + AluSx SINE Alu 1 280 -32 410 257 71 0 chr2 103209285 103209398 -150047185 + MIR SINE MIR 137 257 -5 25 0 0 0 chr2 103210918 103210943 -150045640 + AT_rich Low_complexity Low_complexity 1 25 0 56 29 0 0 chr2 103211860 103211930 -150044653 + AT_rich Low_complexity Low_complexity 1 70 0 204 372 16 8 chr2 103213189 103213310 -150043273 + L2 LINE L2 2697 2818 -496 399 243 189 0 chr2 103213349 103213460 -150043123 - MIR SINE MIR -53 209 78 252 265 133 33 chr2 103213903 103214054 -150042529 - MIR SINE MIR -64 198 33 2205 102 3 0 chr2 103215575 103215879 -150040704 - AluSg SINE Alu -5 305 1 397 231 112 0 chr2 103216181 103216315 -150040268 + L2 LINE L2 3161 3309 -4 207 139 0 0 chr2 103216317 103216353 -150040230 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 209 143 0 41 chr2 103216456 103216505 -150040078 + (TAGA)n Simple_repeat Simple_repeat 2 48 0 426 127 16 0 chr2 103216615 103216678 -150039905 - LTR68 LTR ERV1 0 740 677 294 29 0 0 chr2 103217860 103217895 -150038688 + (CTG)n Simple_repeat Simple_repeat 3 37 0 216 86 0 0 chr2 103220494 103220529 -150036054 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2010 85 14 18 chr2 103220531 103220814 -150035769 - AluSx SINE Alu -30 282 1 2118 111 0 32 chr2 103220997 103221313 -150035270 + AluSq SINE Alu 1 306 -7 1761 155 28 3 chr2 103221324 103221614 -150034969 + AluJb SINE Alu 1 297 -15 418 282 45 0 chr2 103222708 103222818 -150033765 + MIR SINE MIR 47 161 -101 2259 93 0 0 chr2 103222845 103223146 -150033437 + AluSx SINE Alu 1 301 -11 1220 104 0 0 chr2 103223317 103223480 -150033103 + AluSg/x SINE Alu 135 297 -13 360 380 9 9 chr2 103223831 103223944 -150032639 - L2 LINE L2 -18 3254 3142 2346 46 0 23 chr2 103224085 103224387 -150032196 - AluY SINE Alu -16 295 1 859 165 147 0 chr2 103224402 103224572 -150032011 - MER20 DNA MER1_type -24 195 1 802 234 81 5 chr2 103224572 103224761 -150031822 - MER58A DNA MER1_type -20 204 1 264 248 61 41 chr2 103224774 103224890 -150031693 - L2 LINE L2 -313 3000 2884 181 270 0 0 chr2 103225152 103225189 -150031394 + L2 LINE L2 3223 3259 -13 222 171 0 0 chr2 103225238 103225279 -150031304 + (TA)n Simple_repeat Simple_repeat 2 42 0 2076 109 11 0 chr2 103225279 103225562 -150031021 - AluSq SINE Alu -27 286 1 2193 107 3 0 chr2 103225567 103225876 -150030707 - AluSp SINE Alu -3 310 1 788 199 6 50 chr2 103225994 103226175 -150030408 + MER5A DNA MER1_type 2 174 -15 252 289 100 34 chr2 103226195 103226385 -150030198 + MIR SINE MIR 29 226 -36 1713 148 3 50 chr2 103228463 103228669 -150027914 - AluJo SINE Alu -9 303 116 1985 131 7 0 chr2 103228669 103228960 -150027623 + AluSg1 SINE Alu 1 293 -16 1713 148 3 50 chr2 103228960 103229070 -150027513 - AluJo SINE Alu -196 116 2 1943 102 40 43 chr2 103229439 103229742 -150026841 + AluSq SINE Alu 1 302 -11 185 299 30 0 chr2 103229853 103229920 -150026663 - MIR SINE MIR -16 246 178 275 154 0 0 chr2 103230539 103230578 -150026005 + AluSg/x SINE Alu 129 167 -135 195 146 0 0 chr2 103231700 103231741 -150024842 + (GA)n Simple_repeat Simple_repeat 2 42 0 1701 155 4 4 chr2 103234385 103234662 -150021921 + AluJb SINE Alu 24 300 -12 224 233 41 92 chr2 103237248 103237465 -150019118 + L2 LINE L2 2864 3064 -208 2285 106 0 38 chr2 103237720 103238040 -150018543 + AluSx SINE Alu 1 308 -4 802 236 0 0 chr2 103238436 103238601 -150017982 - FRAM SINE Alu -14 162 1 628 139 0 52 chr2 103238737 103238852 -150017731 + AluSg/x SINE Alu 121 229 -83 25 0 0 0 chr2 103238862 103238887 -150017696 + AT_rich Low_complexity Low_complexity 1 25 0 438 241 0 75 chr2 103240745 103240878 -150015705 + L2 LINE L2 3191 3313 0 1997 115 11 0 chr2 103241159 103241437 -150015146 - AluSp SINE Alu 0 313 33 22 0 0 0 chr2 103241739 103241761 -150014822 + GC_rich Low_complexity Low_complexity 1 22 0 416 280 91 21 chr2 103243324 103243510 -150013073 + MIR SINE MIR 51 249 -13 909 309 85 50 chr2 103243937 103244650 -150011933 + L2 LINE L2 2577 3313 0 797 231 33 24 chr2 103244648 103244860 -150011723 + MIR SINE MIR 6 219 -43 * 2438 64 0 0 chr2 103244865 103245160 -150011423 - AluY SINE Alu -16 295 1 1721 165 0 41 chr2 103245259 103245574 -150011009 - AluJb SINE Alu -10 302 1 250 287 260 0 chr2 103246408 103246558 -150010025 - MIR SINE MIR -26 236 48 2033 139 3 0 chr2 103247015 103247318 -150009265 - L1PA14 LINE L1 0 6161 5858 238 299 166 32 chr2 103247470 103247627 -150008956 - MIR3 SINE MIR -15 193 16 2035 94 0 4 chr2 103248373 103248640 -150007943 - AluSq SINE Alu -13 300 35 418 121 0 0 chr2 103248667 103248725 -150007858 - U6 snRNA snRNA -49 58 1 978 249 106 106 chr2 103248836 103249526 -150007057 - MER21B LTR ERV1 -155 708 40 1403 164 68 38 chr2 103249531 103249824 -150006759 - AluJo SINE Alu -8 304 3 25 31 0 0 chr2 103250541 103250573 -150006010 + AT_rich Low_complexity Low_complexity 1 32 0 1357 239 3 13 chr2 103251069 103251370 -150005213 - AluJb SINE Alu -14 298 1 228 35 0 0 chr2 103251603 103251632 -150004951 + (TTA)n Simple_repeat Simple_repeat 1 29 0 1114 153 140 35 chr2 103251639 103251868 -150004715 - AluJo SINE Alu -37 275 23 2170 119 3 0 chr2 103252057 103252360 -150004223 - AluSg SINE Alu -6 304 1 773 177 171 18 chr2 103252545 103252709 -150003874 + MER5A DNA MER1_type 1 189 0 262 260 31 42 chr2 103252984 103253080 -150003503 - L2 LINE L2 -962 2352 2258 1884 131 34 17 chr2 103253160 103253457 -150003126 - AluSx SINE Alu -10 302 1 713 276 124 49 chr2 103253848 103254298 -150002285 - MLT1J LTR MaLR -8 503 20 1992 208 65 37 chr2 103254343 103254827 -150001756 - MER77 LTR ERV1 -4 601 132 243 0 0 0 chr2 103254827 103254854 -150001729 + (TTA)n Simple_repeat Simple_repeat 2 28 0 2181 95 0 0 chr2 103254854 103255128 -150001455 - AluSg SINE Alu -32 278 5 1992 208 65 37 chr2 103255128 103255168 -150001415 - MER77 LTR ERV1 -472 133 84 2188 126 0 3 chr2 103255396 103255705 -150000878 - AluSg1 SINE Alu -1 308 1 721 140 0 0 chr2 103255707 103255807 -150000776 - AluSg/x SINE Alu -16 294 195 3389 55 17 3 chr2 103255859 103256376 -150000207 + LTR10C LTR ERV1 1 591 0 191 372 81 0 chr2 103256377 103256463 -150000120 - MIR3 SINE MIR -53 155 63 2122 138 0 0 chr2 103256484 103256788 -149999795 - AluSx SINE Alu -8 304 1 438 179 93 50 chr2 103257301 103257441 -149999142 + L1ME4a LINE L1 5976 6121 0 2214 106 16 16 chr2 103258013 103258324 -149998259 - AluSx SINE Alu -1 311 1 4566 173 81 17 chr2 103258863 103260087 -149996496 - L1MB3 LINE L1 0 6183 4872 5176 39 3 8 chr2 103260454 103261046 -149995537 - LTR10C LTR ERV1 -2 589 1 2228 64 0 0 chr2 103261273 103261540 -149995043 - AluY SINE Alu -16 295 29 257 360 30 10 chr2 103262335 103262435 -149994148 - MIR SINE MIR -62 146 45 1102 103 0 26 chr2 103263181 103263199 -149993384 - AluSq/x SINE Alu -161 151 134 2503 74 3 0 chr2 103263199 103263508 -149993075 - AluSp SINE Alu -2 311 2 1102 103 0 26 chr2 103263508 103263644 -149992939 - AluSq/x SINE Alu -178 134 1 2259 97 3 0 chr2 103264866 103265155 -149991428 + AluSx SINE Alu 1 290 -22 2416 62 0 31 chr2 103265157 103265477 -149991106 + AluY SINE Alu 1 310 -1 599 296 31 13 chr2 103266617 103266843 -149989740 + L1ME LINE L1 5586 5815 -306 27 0 0 0 chr2 103267245 103267272 -149989311 + AT_rich Low_complexity Low_complexity 1 27 0 2167 118 10 0 chr2 103267484 103267781 -149988802 + AluSq SINE Alu 1 300 -13 2088 125 3 3 chr2 103267883 103268170 -149988413 - AluSq SINE Alu -26 287 1 22 0 0 0 chr2 103268289 103268311 -149988272 + AT_rich Low_complexity Low_complexity 1 22 0 2358 86 0 0 chr2 103268311 103268602 -149987981 - AluSx SINE Alu -21 291 1 27 29 0 0 chr2 103268692 103268726 -149987857 + AT_rich Low_complexity Low_complexity 1 34 0 578 253 78 107 chr2 103269174 103269482 -149987101 - HAL1 LINE L1 -1727 780 482 316 332 124 33 chr2 103269849 103270123 -149986460 + L2 LINE L2 2966 3264 -8 314 114 0 0 chr2 103270885 103270929 -149985654 - L1MC3 LINE L1 -334 7451 7408 304 213 33 0 chr2 103270954 103271015 -149985568 + L2 LINE L2 3182 3244 -69 2336 56 0 0 chr2 103271033 103271303 -149985280 + AluSc SINE Alu 1 270 -39 741 81 10 0 chr2 103271315 103271414 -149985169 - MER101 LTR ERV1 -8 466 367 1696 208 0 0 chr2 103271672 103271984 -149984599 - AluJb SINE Alu 0 312 1 4123 198 92 21 chr2 103271991 103272183 -149984400 - L1MD1 LINE L1 0 6242 6065 2580 54 0 0 chr2 103272183 103272481 -149984102 - AluY SINE Alu -13 298 1 4123 198 92 21 chr2 103272481 103273706 -149982877 - L1MD1 LINE L1 -177 6065 4631 2031 142 0 10 chr2 103273706 103274008 -149982575 - AluSx SINE Alu -13 299 1 4123 198 92 21 chr2 103274008 103274170 -149982413 - L1MD1 LINE L1 -1611 4631 4482 986 234 158 23 chr2 103274845 103275187 -149981396 + L2 LINE L2 2926 3313 0 983 162 58 0 chr2 103276649 103276822 -149979761 - AluJo SINE Alu -10 302 120 561 314 13 8 chr2 103276827 103277066 -149979517 - AluSq SINE Alu 0 313 74 237 33 0 0 chr2 103277139 103277169 -149979414 + (T)n Simple_repeat Simple_repeat 1 30 0 736 234 51 6 chr2 103278039 103278214 -149978369 - AluJo SINE Alu -10 302 120 2224 115 3 3 chr2 103278218 103278531 -149978052 - AluSp SINE Alu 0 313 1 682 193 7 37 chr2 103278544 103278679 -149977904 - FLAM_C SINE Alu 0 143 13 610 179 0 0 chr2 103278676 103278782 -149977801 + AluJo/FRAM SINE Alu 206 311 -1 * 2334 109 0 0 chr2 103278882 103279186 -149977397 - AluSg SINE Alu -6 304 1 2335 88 7 0 chr2 103279426 103279720 -149976863 - AluSc SINE Alu -13 296 1 855 270 27 9 chr2 103279729 103279951 -149976632 - MIR SINE MIR -26 236 11 474 249 160 24 chr2 103280081 103280250 -149976333 - L2 LINE L2 -8 3305 3114 1739 184 13 7 chr2 103280346 103280656 -149975927 - AluJb SINE Alu 0 312 1 22 0 0 0 chr2 103280825 103280847 -149975736 + AT_rich Low_complexity Low_complexity 1 22 0 335 320 39 10 chr2 103281174 103281277 -149975306 - MIR SINE MIR -132 130 25 1396 147 126 3 chr2 103281889 103282174 -149974409 + MER33 DNA MER1_type 4 323 -1 27 81 0 0 chr2 103282723 103282785 -149973798 + AT_rich Low_complexity Low_complexity 1 62 0 24 0 0 0 chr2 103283266 103283290 -149973293 + AT_rich Low_complexity Low_complexity 1 24 0 35 0 0 0 chr2 103283468 103283503 -149973080 + AT_rich Low_complexity Low_complexity 1 35 0 1732 140 86 0 chr2 103283513 103283792 -149972791 - AluJb SINE Alu -9 303 1 450 258 48 32 chr2 103284017 103284141 -149972442 - L2 LINE L2 -6 3307 3182 299 273 59 113 chr2 103284689 103284803 -149971780 + MIR SINE MIR 8 127 -135 1836 108 90 4 chr2 103284803 103285082 -149971501 + AluSg SINE Alu 1 303 -7 299 273 59 113 chr2 103285082 103285223 -149971360 + MIR SINE MIR 127 249 -13 2297 59 3 52 chr2 103285329 103285636 -149970947 + AluSc SINE Alu 1 292 -17 2254 109 7 0 chr2 103286006 103286308 -149970275 + AluSg SINE Alu 1 304 -6 278 280 196 0 chr2 103286508 103286615 -149969968 - MIR SINE MIR -62 146 19 2261 32 86 7 chr2 103288679 103288959 -149967624 + AluY SINE Alu 1 302 -9 2346 95 7 0 chr2 103290522 103290827 -149965756 - AluSq SINE Alu -6 307 1 278 233 0 41 chr2 103293016 103293089 -149963494 - L2 LINE L2 -4 3309 3240 25 51 0 0 chr2 103294353 103294392 -149962191 + AT_rich Low_complexity Low_complexity 1 39 0 209 231 137 9 chr2 103294820 103294915 -149961668 - MIR3 SINE MIR -29 179 65 433 279 25 83 chr2 103295310 103295514 -149961069 + MIR SINE MIR 1 192 -70 1909 129 33 13 chr2 103295516 103295818 -149960765 + AluJo SINE Alu 1 308 -4 559 257 180 15 chr2 103296287 103296493 -149960090 + MIR SINE MIR 8 247 -15 184 152 30 0 chr2 103301684 103301717 -149954866 + L2 LINE L2 3199 3232 -81 23 0 0 0 chr2 103302826 103302849 -149953734 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 103303002 103303023 -149953560 + AT_rich Low_complexity Low_complexity 1 21 0 2321 70 20 10 chr2 103303786 103304085 -149952498 - AluY SINE Alu -9 302 1 23 78 0 0 chr2 103304182 103304233 -149952350 + AT_rich Low_complexity Low_complexity 1 51 0 2095 86 4 4 chr2 103305617 103305897 -149950686 - AluSg SINE Alu -30 280 1 2325 87 3 7 chr2 103306435 103306733 -149949850 - AluSq SINE Alu -14 299 3 2257 96 3 0 chr2 103306751 103307044 -149949539 - AluSp SINE Alu -19 294 1 199 313 62 0 chr2 103307310 103307374 -149949209 + L2 LINE L2 3168 3235 -37 21 57 0 0 chr2 103307455 103307490 -149949093 + AT_rich Low_complexity Low_complexity 1 35 0 186 307 164 42 chr2 103308764 103308953 -149947630 - L3 LINE CR1 -69 1508 1297 30 59 0 0 chr2 103309167 103309218 -149947365 + AT_rich Low_complexity Low_complexity 1 51 0 270 180 44 80 chr2 103309313 103309439 -149947144 - MER58 DNA MER1_type -62 279 169 229 299 93 56 chr2 103309542 103309649 -149946934 - L2 LINE L2 -25 3247 3137 204 308 168 40 chr2 103311749 103312070 -149944513 + L2 LINE L2 165 526 -2788 1453 202 160 38 chr2 103312139 103312590 -149943993 - MER74B LTR ERVL -59 563 58 2200 93 10 7 chr2 103313293 103313593 -149942990 + AluY SINE Alu 5 305 -6 2116 146 20 38 chr2 103315035 103315355 -149941228 - MLT1B LTR MaLR 0 390 77 2034 127 7 13 chr2 103315355 103315662 -149940921 + AluSx SINE Alu 1 305 -7 2116 146 20 38 chr2 103315662 103315738 -149940845 - MLT1B LTR MaLR -313 77 1 2243 81 44 0 chr2 103315857 103316152 -149940431 - AluY SINE Alu -1 310 3 736 218 40 10 chr2 103317083 103317285 -149939298 - MER3 DNA MER1_type 0 209 2 22 0 0 0 chr2 103318325 103318347 -149938236 + AT_rich Low_complexity Low_complexity 1 22 0 1365 192 74 7 chr2 103318637 103318908 -149937675 - AluJo SINE Alu -23 289 1 2222 87 0 75 chr2 103320516 103320848 -149935735 - AluSq SINE Alu -6 307 1 318 241 21 90 chr2 103321142 103321287 -149935296 + L2 LINE L2 3168 3302 -11 283 314 57 50 chr2 103321400 103321559 -149935024 - MIR SINE MIR -54 208 49 1062 109 63 0 chr2 103321587 103321761 -149934822 - L1MA3 LINE L1 0 6305 6121 1976 118 4 11 chr2 103321823 103322103 -149934480 + AluSc SINE Alu 1 278 -31 1192 98 6 29 chr2 103322111 103322285 -149934298 + AluSg/x SINE Alu 121 290 -20 206 227 0 61 chr2 103322693 103322721 -149933862 - MER5B DNA MER1_type -116 62 34 2166 125 0 0 chr2 103322721 103323024 -149933559 + AluSx SINE Alu 1 303 -9 206 227 0 61 chr2 103323024 103323061 -149933522 - MER5B DNA MER1_type -144 34 1 2510 69 0 0 chr2 103323258 103323561 -149933022 + AluY SINE Alu 3 305 -6 3389 201 70 38 chr2 103323594 103325065 -149931518 + L1MDb LINE L1 522 2031 -4375 730 173 7 43 chr2 103325070 103325209 -149931374 + AluJo SINE Alu 3 136 -176 453 240 86 11 chr2 103325221 103325396 -149931187 + L1MDb LINE L1 2072 2259 -4147 658 291 27 18 chr2 103325424 103325644 -149930939 - MIR SINE MIR -1 261 40 1335 115 0 6 chr2 103326584 103326766 -149929817 - AluSx SINE Alu -130 182 2 851 191 6 0 chr2 103326767 103326929 -149929654 + MER45B DNA AcHobo 498 660 -380 2271 92 3 19 chr2 103328092 103328407 -149928176 - AluSq SINE Alu -3 310 1 281 167 60 36 chr2 103328444 103328528 -149928055 - L3b LINE CR1 -173 1410 1325 1276 100 0 0 chr2 103329302 103329472 -149927111 + AluSg/x SINE Alu 137 306 -6 1278 148 36 4 chr2 103329547 103329797 -149926786 - L1MA7 LINE L1 -5 6286 6029 1484 208 31 0 chr2 103329817 103330105 -149926478 - AluJo SINE Alu -15 297 1 2129 115 10 3 chr2 103330281 103330576 -149926007 - AluSx SINE Alu -7 305 9 437 70 0 0 chr2 103332465 103332522 -149924061 - AluSg/x SINE Alu -93 217 161 646 223 35 77 chr2 103332528 103332788 -149923795 - L1ME4a LINE L1 -220 5901 5653 2411 83 0 16 chr2 103332800 103333114 -149923469 - AluSc SINE Alu 0 309 1 247 276 6 100 chr2 103333114 103333284 -149923299 - L1ME4a LINE L1 -449 5672 5519 1931 113 0 14 chr2 103333544 103333819 -149922764 + AluSx SINE Alu 36 306 -6 215 246 0 49 chr2 103334304 103334343 -149922240 + L2 LINE L2 3247 3284 -29 1990 134 0 13 chr2 103334343 103334642 -149921941 - AluSx SINE Alu -17 295 1 215 246 0 49 chr2 103334642 103334663 -149921920 + L2 LINE L2 3284 3304 -9 335 98 16 0 chr2 103335562 103335623 -149920960 + (CA)n Simple_repeat Simple_repeat 2 63 0 2248 100 3 0 chr2 103337153 103337443 -149919140 - AluSx SINE Alu -21 291 1 1882 108 47 21 chr2 103337999 103338278 -149918305 - AluJo SINE Alu -26 286 1 456 271 29 0 chr2 103338316 103338456 -149918127 - L1ME4a LINE L1 -4 6117 5974 232 321 0 0 chr2 103339754 103339810 -149916773 + (CA)n Simple_repeat Simple_repeat 2 57 0 183 42 0 0 chr2 103341181 103341205 -149915378 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 189 0 0 0 chr2 103341753 103341774 -149914809 + (CA)n Simple_repeat Simple_repeat 1 21 0 2316 114 0 3 chr2 103342516 103342823 -149913760 + AluSq SINE Alu 1 306 -7 30 0 0 0 chr2 103343552 103343582 -149913001 + AT_rich Low_complexity Low_complexity 1 30 0 2290 90 14 0 chr2 103343733 103344022 -149912561 - AluSx SINE Alu -19 293 1 250 194 188 55 chr2 103344953 103345118 -149911465 + L1ME4a LINE L1 5930 6116 -5 954 74 16 0 chr2 103345129 103345251 -149911332 + AluSg/x SINE Alu 177 300 -9 186 43 0 0 chr2 103345582 103345605 -149910978 + (TC)n Simple_repeat Simple_repeat 1 23 0 1826 142 0 52 chr2 103346206 103346341 -149910242 + AluJo SINE Alu 1 141 -171 2419 87 3 3 chr2 103346341 103346650 -149909933 + AluSc SINE Alu 1 309 0 1826 142 0 52 chr2 103346650 103346824 -149909759 + AluJo SINE Alu 141 294 -18 531 148 11 0 chr2 103347229 103347317 -149909266 - AluJ/FLAM SINE Alu -219 93 5 207 69 0 0 chr2 103347357 103347386 -149909197 + (TG)n Simple_repeat Simple_repeat 2 30 0 463 292 19 6 chr2 103347425 103347586 -149908997 - L1MC4a LINE L1 -1911 5897 5735 4963 184 16 13 chr2 103347596 103347716 -149908867 - L1MB7 LINE L1 0 6184 6066 2336 105 0 3 chr2 103347716 103348021 -149908562 - AluSq SINE Alu -9 304 1 4963 184 16 13 chr2 103348021 103349403 -149907180 - L1MB7 LINE L1 -118 6066 4679 1572 162 75 38 chr2 103350190 103350561 -149906022 + MLT1B LTR MaLR 4 388 -2 3182 162 56 2 chr2 103351268 103351825 -149904758 + L1MB7 LINE L1 5537 6123 -61 2053 116 3 27 chr2 103351826 103352127 -149904456 - AluSp SINE Alu -19 294 1 2396 107 0 3 chr2 103352127 103352436 -149904147 - AluSx SINE Alu -3 309 1 700 100 0 0 chr2 103352436 103352526 -149904057 - AluS SINE Alu -222 91 2 448 252 156 83 chr2 103352531 103353242 -149903341 - HAL1 LINE L1 -914 1593 831 1523 162 78 27 chr2 103353513 103353809 -149902774 - AluJo SINE Alu -1 311 1 429 20 0 0 chr2 103353953 103354003 -149902580 + (TTA)n Simple_repeat Simple_repeat 2 51 0 1861 141 0 24 chr2 103354045 103354359 -149902224 + AluSx SINE Alu 1 307 0 219 69 0 0 chr2 103354472 103354501 -149902082 + (T)n Simple_repeat Simple_repeat 1 29 0 1810 111 4 0 chr2 103354501 103354735 -149901848 - AluSx SINE Alu -77 235 1 1916 108 0 0 chr2 103355215 103355473 -149901110 - AluSx SINE Alu -4 308 51 2451 74 0 6 chr2 103355503 103355814 -149900769 - AluY SINE Alu -2 309 1 2341 77 3 0 chr2 103356086 103356385 -149900198 + AluSq SINE Alu 1 300 -13 192 77 0 0 chr2 103357211 103357237 -149899346 + (TTTTG)n Simple_repeat Simple_repeat 3 28 0 367 276 24 16 chr2 103357408 103357535 -149899048 + MIR3 SINE MIR 69 196 -12 243 222 10 20 chr2 103357967 103358066 -149898517 + GA-rich Low_complexity Low_complexity 3 100 0 2405 104 0 0 chr2 103358398 103358707 -149897876 + AluSg SINE Alu 1 309 -1 180 0 0 0 chr2 103358949 103358969 -149897614 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 1992 139 30 21 chr2 103359258 103359597 -149896986 - L1MC1 LINE L1 -9 6324 5983 2241 124 0 0 chr2 103359842 103360140 -149896443 + AluSx SINE Alu 1 298 -14 1862 144 94 60 chr2 103360283 103360437 -149896146 + MSTD LTR MaLR 3 150 -246 2246 111 0 3 chr2 103360437 103360735 -149895848 + AluSx SINE Alu 1 297 -15 1862 144 94 60 chr2 103360735 103360961 -149895622 + MSTD LTR MaLR 150 396 0 2222 110 0 3 chr2 103361042 103361334 -149895249 - AluSg SINE Alu -19 291 1 2292 113 0 0 chr2 103361458 103361760 -149894823 + AluSg SINE Alu 1 302 -8 2318 183 69 83 chr2 103361914 103362549 -149894034 - MLT1E2 LTR MaLR 0 626 1 3765 97 36 46 chr2 103363166 103363267 -149893316 + LTR19B LTR ERV1 1 102 -478 2320 71 47 3 chr2 103363267 103363564 -149893019 - AluY SINE Alu -1 310 1 2282 90 7 10 chr2 103363564 103363864 -149892719 - AluSc SINE Alu -10 299 1 3765 97 36 46 chr2 103363864 103364347 -149892236 + LTR19B LTR ERV1 100 580 0 337 211 64 55 chr2 103364567 103364696 -149891887 - MLT1L LTR MaLR -379 209 85 2226 117 0 13 chr2 103365116 103365425 -149891158 + AluSx SINE Alu 1 305 -7 312 114 0 0 chr2 103365606 103365650 -149890933 - MER20 DNA MER1_type 0 219 176 2385 211 40 30 chr2 103365650 103365785 -149890798 + MER45B DNA AcHobo 1 133 -907 2080 138 3 0 chr2 103365785 103366082 -149890501 + AluSx SINE Alu 1 298 -14 2385 211 40 30 chr2 103366082 103366478 -149890105 + MER45B DNA AcHobo 133 537 -503 865 173 6 6 chr2 103366482 103366661 -149889922 + MER53 DNA DNA 11 189 0 2186 157 37 23 chr2 103366662 103367090 -149889493 + MER45B DNA AcHobo 522 955 -85 1347 157 141 16 chr2 103367097 103367346 -149889237 - AluJo SINE Alu -25 287 8 624 139 0 78 chr2 103367349 103367366 -149889217 + MER45B DNA AcHobo 935 952 -629 2439 78 0 0 chr2 103367366 103367661 -149888922 - AluSx SINE Alu -17 295 1 624 139 0 78 chr2 103367661 103367758 -149888825 + MER45B DNA AcHobo 952 1040 0 718 214 25 13 chr2 103367775 103367934 -149888649 - MER20 DNA MER1_type -58 161 1 2177 118 3 0 chr2 103368176 103368481 -149888102 + AluSq SINE Alu 4 309 -4 307 188 25 25 chr2 103369257 103369337 -149887246 - MLT1J LTR MaLR -3 508 429 2236 91 7 0 chr2 103369338 103369625 -149886958 + AluSx SINE Alu 11 299 -13 4092 189 40 8 chr2 103369630 103370423 -149886160 + L1MD2 LINE L1 5502 6320 -39 22 0 0 0 chr2 103370429 103370451 -149886132 + AT_rich Low_complexity Low_complexity 1 22 0 31 26 0 0 chr2 103370564 103370602 -149885981 + AT_rich Low_complexity Low_complexity 1 38 0 418 311 48 82 chr2 103370789 103370971 -149885612 + MER90-int LTR ERV1 1709 1896 -4905 1243 189 147 23 chr2 103370971 103371277 -149885306 + MER2 DNA MER2_type 1 344 0 418 311 48 82 chr2 103371277 103371679 -149884904 + MER90-int LTR ERV1 1896 2269 -4532 2467 71 0 3 chr2 103371679 103371976 -149884607 - AluY SINE Alu -15 296 1 418 311 48 82 chr2 103371976 103372071 -149884512 + MER90-int LTR ERV1 2269 2366 -4435 809 304 72 88 chr2 103372253 103373610 -149882973 + MER90-int LTR ERV1 2549 3571 -3230 2409 86 0 3 chr2 103373610 103373912 -149882671 - AluSx SINE Alu -11 301 1 809 304 72 88 chr2 103373912 103373961 -149882622 + MER90-int LTR ERV1 3571 3619 -3182 2088 300 44 26 chr2 103374133 103374950 -149881633 + MER90-int LTR ERV1 1751 2582 -2065 618 199 68 7 chr2 103374957 103375103 -149881480 + MLT1C LTR MaLR 13 167 -300 1905 150 0 7 chr2 103375108 103375402 -149881181 - AluJb SINE Alu 0 312 21 432 143 0 14 chr2 103375502 103375572 -149881011 - AluJ/FLAM SINE Alu -230 82 14 1198 216 68 27 chr2 103375585 103375609 -149880974 + MLT1C LTR MaLR 164 186 -281 2119 136 0 3 chr2 103375609 103375919 -149880664 + AluSx SINE Alu 1 309 -3 1198 216 68 27 chr2 103375919 103376186 -149880397 + MLT1C LTR MaLR 186 467 0 617 269 39 53 chr2 103376219 103376442 -149880141 + MER90-int LTR ERV1 2647 2872 -3929 2146 117 0 3 chr2 103376442 103376733 -149879850 + AluSc SINE Alu 1 290 -19 617 269 39 53 chr2 103376733 103376911 -149879672 + MER90-int LTR ERV1 2872 5338 -1463 1216 91 0 0 chr2 103377038 103377192 -149879391 - AluSg SINE Alu -156 154 1 1062 278 61 62 chr2 103377811 103377946 -149878637 + MER90-int LTR ERV1 6071 6205 -596 1716 159 6 49 chr2 103377946 103378057 -149878526 + AluJo SINE Alu 1 115 -197 2229 123 0 3 chr2 103378057 103378359 -149878224 + AluSx SINE Alu 1 301 -11 1716 159 6 49 chr2 103378359 103378573 -149878010 + AluJo SINE Alu 115 312 0 1062 278 61 62 chr2 103378573 103379048 -149877535 + MER90-int LTR ERV1 6205 6680 -121 2084 229 17 58 chr2 103379204 103379520 -149877063 + MER90 LTR ERV1 2 330 -245 2217 103 0 0 chr2 103379520 103379827 -149876756 + AluSc SINE Alu 1 307 0 2084 229 17 58 chr2 103379827 103379954 -149876629 + MER90 LTR ERV1 330 417 -158 2220 126 0 13 chr2 103379954 103380264 -149876319 - AluSx SINE Alu -3 309 4 2084 229 17 58 chr2 103380264 103380417 -149876166 + MER90 LTR ERV1 417 575 0 212 228 76 38 chr2 103380658 103380737 -149875846 - L2 LINE L2 -52 3220 3139 1218 141 11 0 chr2 103380876 103381060 -149875523 - MER57A LTR ERV1 -217 186 1 369 212 77 59 chr2 103381152 103381322 -149875261 - HAL1 LINE L1 -2334 173 1 197 261 183 26 chr2 103381701 103381816 -149874767 - MIR3 SINE MIR -71 137 5 452 310 53 6 chr2 103381978 103382149 -149874434 + MIR3 SINE MIR 19 197 -11 736 109 0 0 chr2 103382299 103382400 -149874183 + AluSx SINE Alu 3 103 -209 1812 174 74 29 chr2 103382409 103382861 -149873722 - LTR10A LTR ERV1 -61 548 13 17046 94 31 36 chr2 103382890 103384432 -149872151 - Harlequin LTR ERV1 -17 6632 5084 2345 82 13 10 chr2 103384432 103384737 -149871846 - AluY SINE Alu -5 306 1 17046 94 31 36 chr2 103384737 103387136 -149869447 - Harlequin LTR ERV1 -1565 5084 713 10641 204 47 19 chr2 103387185 103389723 -149866860 - HERVI LTR ERV1 -5198 2587 6 1890 164 78 29 chr2 103389737 103390186 -149866397 - LTR10A LTR ERV1 -61 548 1 1505 104 9 5 chr2 103390186 103390397 -149866186 + AluSx SINE Alu 99 310 -2 590 283 47 51 chr2 103391424 103391491 -149865092 + L1MC4 LINE L1 7041 7107 -760 2487 156 40 28 chr2 103391491 103391846 -149864737 + MSTB1 LTR MaLR 4 366 -66 2412 93 0 0 chr2 103391846 103392147 -149864436 - AluSq SINE Alu -12 301 1 2487 156 40 28 chr2 103392147 103392215 -149864368 + MSTB1 LTR MaLR 366 432 0 590 283 47 51 chr2 103392215 103392302 -149864281 + L1MC4 LINE L1 7107 7251 -616 655 169 0 57 chr2 103392339 103392463 -149864120 + MER119 DNA MER1_type 467 583 0 1065 256 166 8 chr2 103392532 103393009 -149863574 + L2 LINE L2 622 1173 -2141 595 301 107 56 chr2 103393020 103393159 -149863424 + L2 LINE L2 2650 2780 -492 2045 127 41 75 chr2 103393159 103393546 -149863037 + THE1C LTR MaLR 1 374 -1 595 301 107 56 chr2 103393546 103393979 -149862604 + L2 LINE L2 2780 3264 -8 847 226 6 6 chr2 103394717 103394881 -149861702 + AluJo SINE Alu 121 284 -28 2226 96 0 0 chr2 103395320 103395625 -149860958 + AluSx SINE Alu 1 305 0 25 0 0 0 chr2 103397239 103397264 -149859319 + AT_rich Low_complexity Low_complexity 1 25 0 282 193 0 0 chr2 103397344 103397401 -149859182 + (TG)n Simple_repeat Simple_repeat 2 58 0 245 133 67 33 chr2 103397493 103397583 -149859000 + A-rich Low_complexity Low_complexity 1 93 0 1727 147 8 4 chr2 103397610 103397876 -149858707 + AluSx SINE Alu 29 295 -17 447 91 0 52 chr2 103397959 103398074 -149858509 + Alu SINE Alu 240 350 0 2108 101 16 38 chr2 103398080 103398357 -149858226 + AluSx SINE Alu 1 272 -40 210 91 0 0 chr2 103398357 103398390 -149858193 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 2108 101 16 38 chr2 103398390 103398428 -149858155 + AluSx SINE Alu 272 309 -3 1701 187 7 7 chr2 103399292 103399592 -149856991 + AluJb SINE Alu 1 300 -12 1093 145 0 0 chr2 103400277 103400436 -149856147 - FRAM SINE Alu -18 158 1 2096 111 35 0 chr2 103402186 103402475 -149854108 - AluSg SINE Alu -11 299 1 245 188 21 0 chr2 103402598 103402646 -149853937 - L2 LINE L2 -3 3310 3262 1639 152 42 4 chr2 103403101 103403364 -149853219 + AluJb SINE Alu 9 281 -31 234 0 0 0 chr2 103403371 103403397 -149853186 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 2457 75 3 3 chr2 103404016 103404322 -149852261 + AluSx SINE Alu 1 306 -6 223 316 0 0 chr2 103404951 103405030 -149851553 + C-rich Low_complexity Low_complexity 1 79 0 2218 107 10 0 chr2 103405284 103405594 -149850989 - AluSq SINE Alu 0 313 1 358 350 156 11 chr2 103406641 103406821 -149849762 + MIR SINE MIR 54 259 -3 226 268 61 45 chr2 103407203 103407364 -149849219 - MIR SINE MIR -68 140 3 2026 133 3 0 chr2 103407441 103407758 -149848825 + AluSx SINE Alu 1 318 0 889 241 38 17 chr2 103408221 103408458 -149848125 - LTR43 LTR ERV1 -185 417 176 1925 139 0 60 chr2 103408531 103408847 -149847736 - AluJb SINE Alu -14 298 2 998 131 44 22 chr2 103409810 103409993 -149846590 + MER53 DNA DNA 3 189 0 2258 90 132 9 chr2 103410567 103410901 -149845682 - THE1C LTR MaLR 0 375 1 2519 57 0 0 chr2 103410981 103411281 -149845302 + AluY SINE Alu 1 300 -11 361 181 83 0 chr2 103411451 103411523 -149845060 - MER2 DNA MER2_type -1 344 267 750 174 33 0 chr2 103411528 103411649 -149844934 + FRAM SINE Alu 37 161 -15 1525 110 53 20 chr2 103411655 103411900 -149844683 - MER2 DNA MER2_type -92 253 1 253 270 16 0 chr2 103411912 103411975 -149844608 - MIR SINE MIR -158 104 41 548 203 0 114 chr2 103412094 103412217 -149844366 + MER81 DNA DNA 6 114 0 546 225 64 64 chr2 103412426 103412639 -149843944 + MER67C LTR ERV1 137 532 -208 1315 184 0 0 chr2 103412640 103412863 -149843720 - AluJb SINE Alu -2 310 88 353 189 19 94 chr2 103412884 103412990 -149843593 + MER67C LTR ERV1 416 513 -197 1644 258 127 10 chr2 103413419 103414035 -149842548 - HAL1 LINE L1 -373 2134 1447 1217 127 59 45 chr2 103414035 103414177 -149842406 + MER30 DNA MER1_type 1 140 -90 2198 102 0 0 chr2 103414177 103414460 -149842123 + AluSp SINE Alu 1 283 -30 370 61 30 15 chr2 103414463 103414529 -149842054 + (TAAA)n Simple_repeat Simple_repeat 4 70 0 1217 127 59 45 chr2 103414529 103414603 -149841980 + MER30 DNA MER1_type 141 224 -6 3152 118 68 8 chr2 103415353 103415835 -149840748 + MER9 LTR ERVK 1 511 0 39140 94 2 12 chr2 103415835 103416826 -149839757 + HERVK9 LTR ERVK 1 1000 -4916 5778 47 1 5 chr2 103416826 103417490 -149839093 - L1PA6 LINE L1 -6 6148 5487 39140 94 2 12 chr2 103417490 103421732 -149834851 + HERVK9 LTR ERVK 1000 5186 -730 558 327 0 0 chr2 103421707 103421921 -149834662 + HERVK9 LTR ERVK 5976 6189 -1764 * 3352 110 0 2 chr2 103421934 103422387 -149834196 + HERVK9 LTR ERVK 5183 5634 -282 2271 129 7 12 chr2 103422412 103422765 -149833818 + HERVK9 LTR ERVK 5608 5916 0 2955 126 74 4 chr2 103422767 103423242 -149833341 + MER9 LTR ERVK 4 511 0 399 149 0 0 chr2 103423354 103423428 -149833155 + (GA)n Simple_repeat Simple_repeat 2 75 0 207 318 23 23 chr2 103424087 103424175 -149832408 - L2 LINE L2 -1 3271 3184 1454 269 62 9 chr2 103424225 103424664 -149831919 - MLT1C LTR MaLR 0 467 6 452 293 44 11 chr2 103424849 103425030 -149831553 - MIR SINE MIR -30 232 46 2972 101 7 0 chr2 103425208 103425626 -149830957 + L1PBa LINE L1 1387 1807 -5056 1965 107 158 75 chr2 103425626 103425999 -149830584 - MER4A LTR ERV1 0 664 261 644 103 21 10 chr2 103425999 103426096 -149830487 - MER4A LTR ERV1 -566 98 1 9454 91 58 42 chr2 103426097 103427610 -149828973 - MER4A-int LTR ERV1 0 6598 5062 6716 113 6 4 chr2 103427611 103428343 -149828240 + L1PB1 LINE L1 5042 5782 -369 315 113 0 0 chr2 103428343 103428396 -149828187 + (TA)n Simple_repeat Simple_repeat 2 54 0 6716 113 6 4 chr2 103428396 103428766 -149827817 + L1PB1 LINE L1 5782 6150 -1 23 33 0 0 chr2 103428791 103428821 -149827762 + AT_rich Low_complexity Low_complexity 1 30 0 1247 154 184 0 chr2 103428828 103429094 -149827489 + MER33 DNA MER1_type 8 322 -2 196 293 52 0 chr2 103429294 103429345 -149827238 - MIR3 SINE MIR -1 207 154 283 291 134 37 chr2 103429345 103429479 -149827104 + MIR3 SINE MIR 1 147 -61 1068 223 113 64 chr2 103430332 103430426 -149826157 + MSTD LTR MaLR 6 94 -302 1926 142 3 16 chr2 103430426 103430729 -149825854 + AluJb SINE Alu 5 303 -9 1068 223 113 64 chr2 103430729 103431007 -149825576 + MSTD LTR MaLR 94 396 0 201 138 0 0 chr2 103431406 103431435 -149825148 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 2300 88 0 3 chr2 103431532 103431827 -149824756 - AluSx SINE Alu -18 294 1 2116 132 0 0 chr2 103432521 103432810 -149823773 + AluSx SINE Alu 1 289 -23 1885 163 3 0 chr2 103432981 103433270 -149823313 - AluSx SINE Alu -22 290 1 606 191 127 0 chr2 103433715 103433825 -149822758 - FLAM_C SINE Alu -19 124 1 2017 102 7 4 chr2 103435269 103435543 -149821040 - AluSq SINE Alu -18 295 21 1483 107 5 5 chr2 103435549 103435754 -149820829 + AluSg/x SINE Alu 106 310 0 234 0 0 0 chr2 103438500 103438526 -149818057 + (GGGGA)n Simple_repeat Simple_repeat 1 26 0 184 222 67 0 chr2 103439501 103439546 -149817037 - MIR SINE MIR -156 106 59 183 129 0 0 chr2 103439763 103439794 -149816789 + (GAAAA)n Simple_repeat Simple_repeat 3 33 0 999 146 228 43 chr2 103440802 103441056 -149815527 + AluJb SINE Alu 1 301 -1 2222 98 0 7 chr2 103441072 103441369 -149815214 - AluSx SINE Alu -17 295 1 189 301 55 0 chr2 103444393 103444466 -149812117 - L2 LINE L2 -358 2956 2880 276 240 41 83 chr2 103444501 103444622 -149811961 - L2 LINE L2 -578 2736 2621 262 262 172 15 chr2 103444722 103445326 -149811257 + L1MC4a LINE L1 6842 7467 -341 425 320 163 12 chr2 103446693 103447024 -149809559 + L2 LINE L2 2515 2895 -419 1861 161 0 3 chr2 103447197 103447483 -149809100 + AluJb SINE Alu 1 285 -27 1053 135 13 6 chr2 103449317 103449473 -149807110 - AluSg/x SINE Alu -19 291 135 291 262 146 5 chr2 103449917 103450123 -149806460 + L1ME LINE L1 5039 5273 -873 351 265 92 24 chr2 103450166 103450415 -149806168 + L1ME LINE L1 5343 5608 -554 867 85 0 0 chr2 103450521 103450627 -149805956 + AluSg/x SINE Alu 65 170 -142 221 0 0 33 chr2 103450654 103450684 -149805899 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 293 194 42 14 chr2 103450684 103450756 -149805827 + L1ME LINE L1 5728 5801 -369 1743 167 37 10 chr2 103450808 103451102 -149805481 + AluJb SINE Alu 1 302 -10 2483 152 26 14 chr2 103451442 103451871 -149804712 + Tigger2a DNA MER2_type 1 434 0 21 0 0 0 chr2 103452383 103452404 -149804179 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr2 103453467 103453507 -149803076 + AT_rich Low_complexity Low_complexity 1 40 0 3160 195 67 144 chr2 103453959 103454859 -149801724 + L1ME2 LINE L1 3588 4556 -1622 714 171 29 21 chr2 103454859 103454999 -149801584 + FLAM_C SINE Alu 1 141 -2 3160 195 67 144 chr2 103454999 103455624 -149800959 + L1ME2 LINE L1 4556 5228 -950 1960 153 10 0 chr2 103455624 103455925 -149800658 + AluSx SINE Alu 1 304 -8 3160 195 67 144 chr2 103455925 103455987 -149800596 + L1ME2 LINE L1 5228 5293 -885 1338 165 19 68 chr2 103455987 103456296 -149800287 + AluSx SINE Alu 1 294 -18 3160 195 67 144 chr2 103456296 103456327 -149800256 + L1ME2 LINE L1 5293 5325 -853 330 26 0 0 chr2 103456327 103456366 -149800217 + (CA)n Simple_repeat Simple_repeat 2 40 0 3160 195 67 144 chr2 103456366 103456708 -149799875 + L1ME2 LINE L1 5325 5530 -648 852 219 85 49 chr2 103456705 103457071 -149799512 + L1ME2 LINE L1 5752 6130 -34 * 2293 153 32 40 chr2 103457078 103457487 -149799096 - Tigger1 DNA MER2_type 0 2418 2012 2239 81 10 3 chr2 103457487 103457783 -149798800 + AluSp SINE Alu 1 298 -15 2293 153 32 40 chr2 103457783 103457869 -149798714 - Tigger1 DNA MER2_type -406 2012 1927 8230 121 16 11 chr2 103457969 103458810 -149797773 - Tigger1 DNA MER2_type -394 2024 1172 2099 24 49 0 chr2 103458810 103459057 -149797526 - AluY SINE Alu -16 295 37 8230 121 16 11 chr2 103459057 103459541 -149797042 - Tigger1 DNA MER2_type -1246 1172 692 2049 136 61 88 chr2 103459539 103460016 -149796567 - Tigger1 DNA MER2_type -1954 464 1 * 315 0 0 0 chr2 103461467 103461502 -149795081 + (CA)n Simple_repeat Simple_repeat 1 35 0 298 278 99 0 chr2 103462025 103462176 -149794407 + HAL1b LINE L1 415 580 -768 259 242 0 0 chr2 103462360 103462422 -149794161 + LTR41 LTR ERVL 12 73 -700 1075 209 71 38 chr2 103462472 103462669 -149793914 + L1MC5 LINE L1 6790 6979 -982 914 99 0 57 chr2 103462669 103462810 -149793773 + FLAM_C SINE Alu 1 133 0 1075 209 71 38 chr2 103462810 103463005 -149793578 + L1MC5 LINE L1 6979 7195 -766 32 26 0 0 chr2 103464006 103464045 -149792538 + AT_rich Low_complexity Low_complexity 1 39 0 296 307 113 67 chr2 103464415 103464715 -149791868 - L3 LINE CR1 -7 1570 1257 364 207 73 0 chr2 103465220 103465302 -149791281 + MLT1A2 LTR MaLR 1 88 -286 595 194 7 49 chr2 103465510 103465654 -149790929 + MER20 DNA MER1_type 81 218 -1 23 0 0 0 chr2 103465759 103465782 -149790801 + AT_rich Low_complexity Low_complexity 1 23 0 336 200 0 0 chr2 103466558 103466633 -149789950 + CT-rich Low_complexity Low_complexity 1 75 0 25 31 0 0 chr2 103466684 103466716 -149789867 + AT_rich Low_complexity Low_complexity 1 32 0 1405 100 43 43 chr2 103466749 103466979 -149789604 + MER30 DNA MER1_type 1 230 0 745 133 62 116 chr2 103467001 103467226 -149789357 - MER46A DNA MER2_type -23 213 1 334 318 70 15 chr2 103467656 103468202 -149788381 + L1MDa LINE L1 971 1560 -4970 316 278 111 11 chr2 103468312 103468559 -149788024 + L1MDa LINE L1 1798 2038 -863 2108 141 0 0 chr2 103468710 103469014 -149787569 - AluSx SINE Alu -8 304 1 357 275 89 71 chr2 103469136 103469405 -149787178 + L1MDa LINE L1 2350 2623 -3917 1070 156 55 138 chr2 103469406 103469803 -149786780 + MLT1A1 LTR MaLR 2 365 0 786 240 139 59 chr2 103469858 103470385 -149786198 + L1MDa LINE L1 2714 3304 -3236 2333 72 3 3 chr2 103470385 103470677 -149785906 + AluSp SINE Alu 4 295 -18 786 240 139 59 chr2 103470677 103470795 -149785788 + L1MDa LINE L1 3304 3411 -3129 2475 53 0 3 chr2 103471515 103471814 -149784769 - AluY SINE Alu -13 298 1 21 0 0 0 chr2 103471932 103471953 -149784630 + AT_rich Low_complexity Low_complexity 1 21 0 1838 116 0 40 chr2 103473017 103473292 -149783291 - AluY SINE Alu -13 298 35 2199 116 0 3 chr2 103473729 103474030 -149782553 - AluSx SINE Alu -12 300 1 1950 220 101 15 chr2 103474677 103475264 -149781319 - L1ME1 LINE L1 -10 6156 5520 2116 108 9 56 chr2 103475266 103475589 -149780994 + AluSq SINE Alu 1 308 -5 1565 214 146 17 chr2 103475633 103476352 -149780231 - L1ME1 LINE L1 -781 5365 4571 381 290 101 12 chr2 103477674 103477843 -149778740 + MIR SINE MIR 79 262 0 558 257 47 0 chr2 103477996 103478144 -149778439 + L1MC4 LINE L1 6771 6925 -1117 322 279 52 15 chr2 103478221 103478357 -149778226 + L1MC5 LINE L1 7757 7897 -64 181 106 21 64 chr2 103478690 103478737 -149777846 + (TTTTC)n Simple_repeat Simple_repeat 4 48 0 234 162 0 44 chr2 103479290 103479358 -149777225 + CT-rich Low_complexity Low_complexity 2 66 0 2108 119 3 0 chr2 103479963 103480248 -149776335 + AluSx SINE Alu 2 287 -25 2273 88 10 7 chr2 103480259 103480556 -149776027 + AluSq SINE Alu 1 298 -15 24 32 0 0 chr2 103480558 103480589 -149775994 + AT_rich Low_complexity Low_complexity 1 31 0 540 205 31 8 chr2 103480591 103480718 -149775865 - L1ME LINE L1 -572 5592 5463 307 233 35 0 chr2 103480753 103480839 -149775744 - L1ME LINE L1 -786 5378 5290 22 35 0 0 chr2 103482762 103482791 -149773792 + AT_rich Low_complexity Low_complexity 1 29 0 317 300 9 45 chr2 103483328 103483438 -149773145 - MIR3 SINE MIR -6 202 97 2305 80 0 26 chr2 103483765 103484077 -149772506 - AluSg SINE Alu -6 304 1 22 35 0 0 chr2 103484116 103484145 -149772438 + AT_rich Low_complexity Low_complexity 1 29 0 296 318 23 31 chr2 103484487 103484616 -149771967 + MER5A DNA MER1_type 35 162 -27 395 209 132 62 chr2 103484630 103484759 -149771824 - MIR SINE MIR -106 156 19 1454 164 0 39 chr2 103484790 103485046 -149771537 + AluJb SINE Alu 1 246 -66 386 299 96 61 chr2 103485133 103485330 -149771253 - L2 LINE L2 -666 2648 2445 200 309 44 0 chr2 103485761 103485829 -149770754 - MIR SINE MIR -159 103 33 536 254 61 6 chr2 103485908 103486089 -149770494 + L1ME3 LINE L1 4642 4832 -1314 780 178 131 7 chr2 103486109 103486391 -149770192 + L1ME3 LINE L1 5191 5508 -818 1219 168 45 139 chr2 103486395 103486884 -149769699 + L1MC3 LINE L1 6772 7214 -571 217 239 0 0 chr2 103487130 103487176 -149769407 + (TATATG)n Simple_repeat Simple_repeat 3 48 0 286 305 74 0 chr2 103487183 103487278 -149769305 + L1MC5 LINE L1 7793 7894 -67 358 236 9 9 chr2 103489218 103489324 -149767259 + L1ME3 LINE L1 6007 6112 -50 7277 127 21 9 chr2 103589374 103591349 -149665234 - L1PA13 LINE L1 -3 6160 4164 315 71 0 0 chr2 103591923 103591965 -149664618 + (CA)n Simple_repeat Simple_repeat 2 43 0 189 0 0 0 chr2 103591964 103591985 -149664598 + (TC)n Simple_repeat Simple_repeat 1 21 0 * 2399 104 0 0 chr2 103593322 103593631 -149662952 + AluSq SINE Alu 1 309 -4 262 309 41 8 chr2 103593649 103593772 -149662811 + L1MC5 LINE L1 7782 7908 -53 303 28 0 0 chr2 103593842 103593878 -149662705 + (TG)n Simple_repeat Simple_repeat 1 36 0 2355 93 3 0 chr2 103593937 103594237 -149662346 + AluSp SINE Alu 1 301 -12 658 220 21 14 chr2 103594491 103594632 -149661951 - AluSg/x SINE Alu -16 296 155 2198 118 3 0 chr2 103594735 103595031 -149661552 - AluSx SINE Alu -15 297 1 567 227 40 33 chr2 103595031 103595181 -149661402 + L1ME3A LINE L1 3572 3722 -2424 * 2141 203 48 74 chr2 103595176 103595796 -149660787 + L1ME3A LINE L1 5470 6073 -97 1910 100 77 0 chr2 103595857 103596117 -149660466 + AluSq SINE Alu 1 280 -33 214 200 107 80 chr2 103596125 103596200 -149660383 - L2 LINE L2 -1379 1935 1859 * 489 270 62 9 chr2 103596182 103596348 -149660235 - MIR SINE MIR -30 178 1 234 62 0 0 chr2 103596694 103596726 -149659857 + (TG)n Simple_repeat Simple_repeat 2 33 0 486 0 0 0 chr2 103598348 103598402 -149658181 + (CA)n Simple_repeat Simple_repeat 1 54 0 1129 137 6 0 chr2 103599017 103599199 -149657384 + L1MA4 LINE L1 6085 6267 -33 803 176 31 13 chr2 103599846 103600005 -149656578 + L1MB8 LINE L1 6009 6170 -8 5180 97 32 1 chr2 103600480 103601173 -149655410 - L1PA11 LINE L1 0 6174 5461 1700 141 40 17 chr2 103602790 103603088 -149653495 - AluJb SINE Alu -7 305 1 260 260 57 57 chr2 103604032 103604155 -149652428 - L2 LINE L2 0 3272 3150 2462 89 0 0 chr2 103604783 103605085 -149651498 + AluSg SINE Alu 1 302 -8 408 84 211 0 chr2 103605124 103605195 -149651388 - L1MA2 LINE L1 -105 6199 6114 468 207 116 27 chr2 103605226 103605409 -149651174 - MIR SINE MIR -50 212 17 261 238 0 16 chr2 103605486 103605549 -149651034 + L2 LINE L2 3180 3241 -31 203 351 46 61 chr2 103606121 103606252 -149650331 - L2 LINE L2 -1 3312 3184 221 297 0 54 chr2 103606337 103606411 -149650172 - MIR SINE MIR -35 227 158 2162 139 0 0 chr2 103606476 103606778 -149649805 - AluSx SINE Alu -10 302 1 267 365 8 16 chr2 103607653 103607779 -149648804 + MIR SINE MIR 88 212 -50 1863 123 39 36 chr2 103608191 103608500 -149648083 + AluSx SINE Alu 1 310 -2 402 206 128 0 chr2 103609293 103609395 -149647188 + L1MB3 LINE L1 6067 6181 -2 1955 125 52 0 chr2 103609823 103610095 -149646488 + AluSx SINE Alu 10 295 -17 183 80 0 0 chr2 103610895 103610920 -149645663 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 446 304 59 20 chr2 103612285 103612489 -149644094 - MIR SINE MIR -18 244 33 1571 188 17 31 chr2 103612572 103612859 -149643724 + AluJo SINE Alu 1 283 -29 485 164 3 51 chr2 103612859 103613159 -149643424 + (TA)n Simple_repeat Simple_repeat 1 285 0 357 24 0 0 chr2 103613170 103613212 -149643371 + (TG)n Simple_repeat Simple_repeat 1 42 0 1718 166 50 82 chr2 103613899 103613966 -149642617 - MSTB2 LTR MaLR 0 457 389 2320 91 24 0 chr2 103613966 103614264 -149642319 + AluSx SINE Alu 1 305 -7 1718 166 50 82 chr2 103614264 103614660 -149641923 - MSTB2 LTR MaLR -68 389 9 2216 190 88 8 chr2 103615271 103615771 -149640812 - L1MA10 LINE L1 -2 6332 5793 229 302 0 0 chr2 103615817 103615880 -149640703 - Charlie2b DNA MER1_type -1476 1306 1244 303 216 24 24 chr2 103615896 103616021 -149640562 + (TA)n Simple_repeat Simple_repeat 1 125 0 234 91 0 0 chr2 103616021 103616054 -149640529 + (GA)n Simple_repeat Simple_repeat 2 34 0 280 348 51 44 chr2 103616077 103616373 -149640210 - Charlie2b DNA MER1_type -2198 584 287 295 89 36 0 chr2 103616988 103617044 -149639539 + CT-rich Low_complexity Low_complexity 2 59 0 444 355 60 26 chr2 103617141 103617409 -149639174 + L3 LINE CR1 790 1066 -511 4428 170 7 3 chr2 103617807 103618535 -149638048 + HERVE LTR ERV1 4806 5536 -2277 236 296 68 38 chr2 103619070 103619202 -149637381 + SST1 Satellite centromeric 352 487 -1076 294 236 0 42 chr2 103620025 103620097 -149636486 + SST1 Satellite centromeric 1148 1216 -347 1425 239 3 13 chr2 103620176 103620485 -149636098 + HERVE LTR ERV1 4376 4681 -3132 1737 147 0 8 chr2 103620696 103620961 -149635622 - AluSc SINE Alu -8 301 39 1418 237 27 18 chr2 103621389 103621840 -149634743 - L1P LINE L1 -2751 3395 2941 552 254 63 95 chr2 103622066 103622318 -149634265 + LTR1B LTR ERV1 583 826 0 180 152 0 0 chr2 103622663 103622696 -149633887 + A-rich Low_complexity Low_complexity 1 33 0 888 166 140 31 chr2 103623047 103623240 -149633343 - MSTA LTR MaLR -13 415 202 256 286 0 0 chr2 103623494 103623571 -149633012 - MADE1 DNA Mariner -3 77 1 23 0 0 0 chr2 103625159 103625182 -149631401 + AT_rich Low_complexity Low_complexity 1 23 0 30 69 0 0 chr2 103625330 103625388 -149631195 + AT_rich Low_complexity Low_complexity 1 58 0 243 149 15 30 chr2 103625979 103626046 -149630537 + (TA)n Simple_repeat Simple_repeat 1 66 0 1416 195 9 138 chr2 103626331 103626716 -149629867 - L1PA16 LINE L1 -109 6057 5724 307 281 111 10 chr2 103626828 103627027 -149629556 + L1ME3A LINE L1 5727 5945 -225 1824 161 0 7 chr2 103627951 103628255 -149628328 - THE1-int LTR MaLR -244 1336 1035 3373 168 24 22 chr2 103628642 103629273 -149627310 - THE1-int LTR MaLR -534 1046 415 1989 136 3 7 chr2 103629380 103629682 -149626901 - AluSg SINE Alu -8 302 2 237 267 58 110 chr2 103630371 103630562 -149626021 - L2 LINE L2 -919 2395 2215 21 0 0 0 chr2 103631816 103631837 -149624746 + AT_rich Low_complexity Low_complexity 1 21 0 774 108 8 8 chr2 103631838 103631958 -149624625 - MLT1B LTR MaLR -270 120 1 1358 50 0 0 chr2 103632238 103632397 -149624186 - L1PA4 LINE L1 0 6155 5997 461 35 0 0 chr2 103632398 103632456 -149624127 - L1PA4 LINE L1 -101 6054 5997 * 6854 25 3 11 chr2 103632453 103633636 -149622947 - L1PA4 LINE L1 -97 6058 4885 829 204 60 0 chr2 103634063 103634230 -149622353 + AluSg/x SINE Alu 134 310 0 25 0 0 0 chr2 103634523 103634548 -149622035 + AT_rich Low_complexity Low_complexity 1 25 0 261 0 0 0 chr2 103634983 103635012 -149621571 + (TG)n Simple_repeat Simple_repeat 2 30 0 907 208 15 136 chr2 103635038 103635427 -149621156 - MLT2C1 LTR ERVL -55 342 1 471 317 42 6 chr2 103635472 103635639 -149620944 + MIR SINE MIR 21 193 -69 186 311 40 0 chr2 103635963 103636037 -149620546 - L2 LINE L2 -737 2577 2501 301 284 14 0 chr2 103638465 103638539 -149618044 - L2 LINE L2 -1 3312 3238 709 231 40 0 chr2 103638553 103638726 -149617857 + MER104 DNA MER2_type 1 180 0 541 327 106 29 chr2 103639881 103640373 -149616210 - L2 LINE L2 -429 2885 2356 199 135 77 0 chr2 103640762 103640814 -149615769 + (CATG)n Simple_repeat Simple_repeat 3 58 0 2187 90 10 16 chr2 103644921 103645232 -149611351 + AluY SINE Alu 1 309 -2 295 309 181 7 chr2 103646898 103647047 -149609536 - MIR SINE MIR -59 203 29 229 266 109 0 chr2 103647471 103647535 -149609048 + L2 LINE L2 3225 3295 -18 201 39 0 0 chr2 103648107 103648133 -149608450 + (TG)n Simple_repeat Simple_repeat 2 27 0 1645 230 85 21 chr2 103648133 103648603 -149607980 - MLT1D LTR MaLR -5 500 1 305 264 0 73 chr2 103648775 103648885 -149607698 - MIR SINE MIR -50 212 111 243 0 0 0 chr2 103651705 103651732 -149604851 + (CCA)n Simple_repeat Simple_repeat 2 28 0 1293 116 0 0 chr2 103652328 103652501 -149604082 - AluSg/x SINE Alu -16 296 124 948 142 56 0 chr2 103652711 103652873 -149603710 - L1MB3 LINE L1 -2 6181 6011 2383 235 186 20 chr2 103652961 103653285 -149603298 - L1MCb LINE L1 -4502 2062 1793 189 0 0 0 chr2 103653285 103653306 -149603277 + (TC)n Simple_repeat Simple_repeat 2 22 0 2383 235 186 20 chr2 103653306 103654261 -149602322 - L1MCb LINE L1 -4771 1793 561 401 319 126 70 chr2 103654596 103654969 -149601614 - L1MCb LINE L1 -5623 422 29 899 176 0 0 chr2 103655029 103655160 -149601423 - FLAM_A SINE Alu -2 131 1 1230 129 101 32 chr2 103655552 103655769 -149600814 + MER46A DNA MER2_type 1 232 -4 6847 134 16 39 chr2 103657570 103658344 -149598239 - Tigger3b DNA MER2_type -1797 1231 441 2089 133 3 0 chr2 103658344 103658646 -149597937 - AluSx SINE Alu -9 303 1 6847 134 16 39 chr2 103658646 103658839 -149597744 - Tigger3b DNA MER2_type -2587 441 293 1410 99 33 86 chr2 103658839 103659082 -149597501 + MER30 DNA MER1_type 1 230 0 6847 134 16 39 chr2 103659082 103659295 -149597288 - Tigger3b DNA MER2_type -2735 293 77 263 192 341 0 chr2 103659536 103659634 -149596949 + MIR SINE MIR 22 145 -63 236 185 0 19 chr2 103659790 103659844 -149596739 + G-rich Low_complexity Low_complexity 2 54 0 2672 148 50 17 chr2 103661123 103661584 -149594999 + L1PA16 LINE L1 5691 6166 0 2304 95 3 0 chr2 103661594 103661888 -149594695 - AluSp SINE Alu -18 295 1 203 108 54 0 chr2 103663447 103663484 -149593099 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 2132 107 3 7 chr2 103663489 103663787 -149592796 - AluSx SINE Alu -15 297 1 430 292 183 43 chr2 103663922 103665093 -149591490 - L2 LINE L2 -180 3092 1753 244 176 0 0 chr2 103665126 103665177 -149591406 - L1MC4 LINE L1 -1339 6703 6653 253 222 0 0 chr2 103665295 103665349 -149591234 + L2 LINE L2 3181 3234 -38 498 203 146 57 chr2 103665527 103665685 -149590898 + MER106B DNA MER1_type 42 1036 -23 1491 120 16 12 chr2 103666428 103666678 -149589905 - MER6 DNA MER2_type 0 865 615 741 54 0 0 chr2 103666678 103666771 -149589812 + L1PA8 LINE L1 5060 5152 -994 3980 62 0 14 chr2 103667482 103667967 -149588616 + L1PA8 LINE L1 5681 6158 -14 1784 76 36 5 chr2 103668979 103669202 -149587381 + MER30 DNA MER1_type 1 230 0 2097 132 0 0 chr2 103669386 103669675 -149586908 - AluSx SINE Alu -23 289 1 434 141 14 0 chr2 103669911 103669982 -149586601 + MADE1 DNA Mariner 9 80 0 271 213 25 0 chr2 103670716 103670796 -149585787 + GA-rich Low_complexity Low_complexity 1 82 0 22 0 0 0 chr2 103671761 103671783 -149584800 + AT_rich Low_complexity Low_complexity 1 22 0 1853 101 4 0 chr2 103671943 103672190 -149584393 - AluSp SINE Alu 0 313 66 2522 99 19 40 chr2 103673106 103673478 -149583105 - THE1B LTR MaLR 0 364 1 3534 109 0 2 chr2 103673554 103674032 -149582551 - L1PA13 LINE L1 -3 6160 5684 28 29 0 0 chr2 103674422 103674457 -149582126 + AT_rich Low_complexity Low_complexity 1 35 0 193 333 139 9 chr2 103675157 103675265 -149581318 + L2 LINE L2 3145 3266 -6 203 321 18 0 chr2 103675469 103675525 -149581058 - L2 LINE L2 -9 3263 3207 444 224 84 37 chr2 103675744 103675851 -149580732 - L2 LINE L2 -3 3269 3158 1969 146 3 10 chr2 103676128 103676423 -149580160 + AluJb SINE Alu 6 298 -14 27 29 0 0 chr2 103677411 103677445 -149579138 + AT_rich Low_complexity Low_complexity 1 34 0 4131 227 81 70 chr2 103678591 103681619 -149574964 - L1ME2 LINE L1 -10 6154 3094 427 280 140 2 chr2 103683867 103684049 -149572534 + LTR33 LTR ERVL 1 185 -336 409 319 161 40 chr2 103684809 103685113 -149571470 - L2 LINE L2 -22 3291 2951 774 238 33 14 chr2 103685246 103685460 -149571123 - L1MC4 LINE L1 -398 7644 7427 551 172 138 69 chr2 103685598 103685743 -149570840 - MER45A DNA AcHobo -1 177 23 5912 199 72 56 chr2 103686152 103686346 -149570237 - L1MC4 LINE L1 -12 8030 7841 216 0 0 0 chr2 103686346 103686370 -149570213 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 5912 199 72 56 chr2 103686370 103686387 -149570196 - L1MC4 LINE L1 -201 7841 7826 1971 97 61 21 chr2 103686387 103686666 -149569917 - AluSg SINE Alu -20 290 1 5912 199 72 56 chr2 103686666 103688104 -149568479 - L1MC4 LINE L1 -216 7826 6354 512 216 0 0 chr2 103688439 103688536 -149568047 - MLT1A1 LTR MaLR -7 588 492 2591 40 0 23 chr2 103690878 103691182 -149565401 + AluY SINE Alu 1 297 -14 248 221 0 15 chr2 103691251 103691319 -149565264 + CT-rich Low_complexity Low_complexity 2 68 0 * 315 272 86 49 chr2 103691271 103691433 -149565150 - L1MC4a LINE L1 -1716 6092 5925 863 72 65 58 chr2 103691509 103691647 -149564936 - MER85 DNA T2_type 0 139 1 419 310 97 0 chr2 103691647 103691792 -149564791 - MIR SINE MIR -75 187 29 1131 196 123 49 chr2 103691960 103692286 -149564297 - MLT1A1 LTR MaLR -13 352 3 2498 61 0 0 chr2 103693531 103693824 -149562759 + AluY SINE Alu 1 293 -18 333 306 41 16 chr2 103693845 103693966 -149562617 + MIR SINE MIR 27 150 -58 2717 170 62 22 chr2 103694207 103694742 -149561841 + MER74A LTR ERVL 3 558 0 503 204 74 68 chr2 103695656 103695693 -149560890 + MER69A DNA AcHobo 1 36 -2490 2246 93 3 3 chr2 103695693 103695983 -149560600 + AluSp SINE Alu 1 290 -23 503 204 74 68 chr2 103695983 103696121 -149560462 + MER69A DNA AcHobo 36 177 0 885 161 19 19 chr2 103696363 103696524 -149560059 + FAM SINE Alu 12 172 -13 457 326 94 9 chr2 103697696 103697929 -149558654 + MIR SINE MIR 3 255 -7 21 0 0 0 chr2 103697961 103697982 -149558601 + AT_rich Low_complexity Low_complexity 1 21 0 2072 122 0 17 chr2 103700949 103701245 -149555338 + AluSx SINE Alu 1 291 -21 1041 140 85 5 chr2 103701267 103701467 -149555116 + L1MA7 LINE L1 6075 6290 -1 311 119 0 17 chr2 103703538 103703597 -149552986 + (GA)n Simple_repeat Simple_repeat 1 58 0 340 260 26 0 chr2 103707743 103707820 -149548763 + L2 LINE L2 3235 3313 0 2023 314 113 13 chr2 103708781 103709830 -149546753 - L2 LINE L2 -337 2977 1824 463 295 154 29 chr2 103710073 103710520 -149546063 - L2 LINE L2 0 3313 2811 1418 197 57 46 chr2 103710594 103711031 -149545552 - L1MD3 LINE L1 -1 8039 7619 2461 57 0 10 chr2 103711461 103711760 -149544823 - AluY SINE Alu -15 296 1 449 310 7 7 chr2 103712015 103712160 -149544423 - MIR SINE MIR -29 233 89 3610 195 66 19 chr2 103712215 103713001 -149543582 + Charlie1a DNA MER1_type 65 887 -568 495 0 0 0 chr2 103713003 103713058 -149543525 + (TTTTA)n Simple_repeat Simple_repeat 2 56 0 2513 65 3 7 chr2 103713420 103713727 -149542856 - AluY SINE Alu -5 306 1 818 187 9 103 chr2 103713730 103713944 -149542639 - L1PA16 LINE L1 0 6166 5973 381 183 0 0 chr2 103713944 103714015 -149542568 + Charlie1a DNA MER1_type 880 950 -505 21 36 0 0 chr2 103714252 103714280 -149542303 + AT_rich Low_complexity Low_complexity 1 28 0 282 303 74 3 chr2 103714305 103714352 -149542231 - MIR SINE MIR -19 243 201 1915 130 85 3 chr2 103714352 103714682 -149541901 - MER46B DNA MER2_type -4 232 1 282 303 74 3 chr2 103714682 103714810 -149541773 - MIR SINE MIR -61 201 6 245 153 42 125 chr2 103716217 103716289 -149540294 + L2 LINE L2 3204 3269 -3 1800 141 7 20 chr2 103716557 103716854 -149539729 + AluJb SINE Alu 2 294 -18 24 32 0 0 chr2 103718059 103718090 -149538493 + AT_rich Low_complexity Low_complexity 1 31 0 2221 102 26 0 chr2 103718615 103718650 -149537933 - AluSx SINE Alu 0 312 279 360 0 0 0 chr2 103718650 103718690 -149537893 + (TTA)n Simple_repeat Simple_repeat 3 42 0 2221 102 26 0 chr2 103718690 103718958 -149537625 - AluSx SINE Alu -33 279 1 570 328 68 37 chr2 103718996 103719405 -149537178 + LTR67 LTR ERVL 127 548 -9 377 224 132 40 chr2 103719616 103719768 -149536815 - L3 LINE CR1 -758 819 654 26 30 0 0 chr2 103722178 103722211 -149534372 + AT_rich Low_complexity Low_complexity 1 33 0 292 239 75 52 chr2 103723607 103723811 -149532772 - MIR SINE MIR 0 262 13 1263 176 34 54 chr2 103724120 103724416 -149532167 + L1MA9 LINE L1 6000 6289 -23 2096 123 10 20 chr2 103724419 103724582 -149532001 - AluSq SINE Alu -14 299 139 2302 92 3 3 chr2 103724582 103724888 -149531695 - AluY SINE Alu -5 306 1 2096 123 10 20 chr2 103724888 103725026 -149531557 - AluSq SINE Alu -174 139 1 29 47 0 0 chr2 103725028 103725071 -149531512 + AT_rich Low_complexity Low_complexity 1 43 0 526 271 34 40 chr2 103725658 103725835 -149530748 - MER5A DNA MER1_type 0 189 14 305 213 0 0 chr2 103726177 103726238 -149530345 - MLT1H LTR MaLR 0 549 489 2811 62 11 6 chr2 103726242 103726599 -149529984 - L1PA13 LINE L1 0 6163 5805 1879 154 0 17 chr2 103726599 103726897 -149529686 - AluJb SINE Alu -19 293 1 281 296 71 26 chr2 103726990 103727238 -149529345 - MLT1H LTR MaLR -240 309 18 251 237 26 26 chr2 103728660 103728736 -149527847 - L1ME1 LINE L1 0 6166 6091 * 560 263 26 0 chr2 103728731 103728887 -149527696 - L1MDb LINE L1 -5354 1055 896 2724 168 19 2 chr2 103728888 103729365 -149527218 - L1MC3 LINE L1 -101 7684 7200 280 286 10 10 chr2 103729365 103729463 -149527120 - MLT1F1 LTR MaLR -433 134 37 796 196 84 4 chr2 103729464 103729689 -149526894 - L1MC3 LINE L1 -687 7098 6856 * 1451 222 73 44 chr2 103729684 103729816 -149526767 - L1M4 LINE L1 -813 5333 5206 742 166 38 6 chr2 103729816 103729973 -149526610 - L1MB8 LINE L1 0 6178 6017 1451 222 73 44 chr2 103729973 103730336 -149526247 - L1M4 LINE L1 -940 5206 4824 251 118 0 0 chr2 103731329 103731363 -149525220 - FLAM SINE Alu -9 124 91 545 274 174 0 chr2 103731411 103731601 -149524982 + MIR SINE MIR 4 226 -36 410 235 162 54 chr2 103732412 103732616 -149523967 + L2 LINE L2 3088 3313 0 290 336 130 27 chr2 103734586 103734848 -149521735 - L3 LINE CR1 -161 1416 1128 213 403 26 0 chr2 103734839 103734916 -149521667 - L2 LINE L2 -94 3178 3100 * 650 244 46 20 chr2 103735071 103735268 -149521315 + L2 LINE L2 3103 3304 -9 330 346 154 7 chr2 103735258 103735394 -149521189 - L3 LINE CR1 -1004 573 418 * 367 325 39 57 chr2 103735514 103735737 -149520846 - MIR SINE MIR -3 259 38 24 0 0 0 chr2 103736565 103736589 -149519994 + AT_rich Low_complexity Low_complexity 1 24 0 1693 144 115 0 chr2 103736883 103737161 -149519422 - AluSx SINE Alu -2 310 1 331 143 0 0 chr2 103737702 103737751 -149518832 - AluS SINE Alu -242 61 13 1722 92 9 0 chr2 103737752 103737980 -149518603 + AluSq SINE Alu 68 297 -16 2308 94 0 0 chr2 103738731 103739018 -149517565 + AluSq SINE Alu 1 287 -26 2431 82 0 0 chr2 103739029 103739322 -149517261 + AluY SINE Alu 1 293 -18 27 0 0 0 chr2 103739322 103739349 -149517234 + AT_rich Low_complexity Low_complexity 1 27 0 254 252 39 68 chr2 103740217 103740320 -149516263 - L2 LINE L2 0 3272 3173 2402 94 10 0 chr2 103740426 103740735 -149515848 + AluSx SINE Alu 1 312 0 817 221 6 17 chr2 103740754 103740926 -149515657 + L1MB5 LINE L1 5997 6166 -8 1079 151 23 0 chr2 103741104 103741276 -149515307 - AluSg/x SINE Alu -3 309 134 21 0 0 0 chr2 103741354 103741375 -149515208 + AT_rich Low_complexity Low_complexity 1 21 0 358 303 45 45 chr2 103743366 103743521 -149513062 + MIR3 SINE MIR 50 204 -4 1832 167 31 55 chr2 103744827 103745261 -149511322 + L1M4 LINE L1 4996 5439 -735 2259 110 0 0 chr2 103745261 103745560 -149511023 + AluSg SINE Alu 11 309 -1 1832 167 31 55 chr2 103745560 103745751 -149510832 + L1M4 LINE L1 5439 5598 -576 2363 85 0 0 chr2 103745751 103746044 -149510539 + AluSq SINE Alu 1 293 -20 1832 167 31 55 chr2 103746044 103746067 -149510516 + L1M4 LINE L1 5598 5620 -554 232 188 42 0 chr2 103746068 103746116 -149510467 + MIR SINE MIR 75 124 -84 354 263 88 6 chr2 103749895 103750055 -149506528 - L2 LINE L2 -552 2762 2590 782 370 68 14 chr2 103750068 103750638 -149505945 - L2 LINE L2 -910 2404 1804 897 248 86 8 chr2 103750724 103750958 -149505625 - MIR SINE MIR -3 259 8 437 120 76 11 chr2 103753276 103753368 -149503215 - LTR50 LTR ERVL -694 101 4 2972 182 55 32 chr2 103753933 103754396 -149502187 + MER6 DNA MER2_type 1 483 -382 1994 115 58 0 chr2 103754396 103754691 -149501892 - AluSx SINE Alu 0 312 1 2972 182 55 32 chr2 103754691 103754842 -149501741 + MER6 DNA MER2_type 483 629 -236 7406 63 0 0 chr2 103754860 103756049 -149500534 - L1PA8 LINE L1 -2 6170 4970 1961 157 29 0 chr2 103756345 103756688 -149499895 - LTR53 LTR ERVL -166 353 1 401 295 191 16 chr2 103756693 103756944 -149499639 + L3 LINE CR1 1282 1576 -1 221 137 176 0 chr2 103757439 103757490 -149499093 - L2 LINE L2 0 3272 3213 309 311 34 61 chr2 103757856 103758004 -149498579 + L2 LINE L2 3170 3313 0 342 0 0 0 chr2 103758409 103758447 -149498136 + (TG)n Simple_repeat Simple_repeat 2 39 0 207 295 66 0 chr2 103758814 103758875 -149497708 + L2 LINE L2 3158 3222 -50 5968 155 9 5 chr2 103759172 103760885 -149495698 - L1PB3 LINE L1 -3 6151 4433 3574 179 40 0 chr2 103760884 103761561 -149495022 + L1PB3 LINE L1 3707 4410 -1736 * 1929 138 24 7 chr2 103761585 103761875 -149494708 - AluJo SINE Alu -17 295 1 356 225 90 0 chr2 103763104 103763193 -149493390 - L1MA10 LINE L1 -13 6321 6225 3155 223 51 34 chr2 103763253 103764784 -149491799 - L1ME1 LINE L1 -108 6127 4566 347 261 45 54 chr2 103764808 103765030 -149491553 - L1ME1 LINE L1 -5095 1301 1082 951 238 14 11 chr2 103765033 103765319 -149491264 - L1M4 LINE L1 -1646 4569 4283 * 5528 245 82 45 chr2 103765310 103767843 -149488740 - L1MEc LINE L1 -3516 2699 112 188 359 47 19 chr2 103768455 103768561 -149488022 - L2 LINE L2 -232 3040 2932 2520 119 24 71 chr2 103768713 103769166 -149487417 - L1PB4 LINE L1 -13 6143 5712 210 349 0 0 chr2 103769240 103769306 -149487277 - L2 LINE L2 -565 2749 2684 1340 307 78 29 chr2 103769312 103770084 -149486499 + L1MEc LINE L1 56 865 -5531 * 2469 250 88 14 chr2 103770080 103770838 -149485745 + L1MEc LINE L1 2785 3741 -2474 2399 167 33 19 chr2 103770838 103771258 -149485325 - MSTB LTR MaLR 0 426 1 2469 250 88 14 chr2 103771258 103771735 -149484848 + L1MEc LINE L1 3741 4181 -2034 1431 181 25 25 chr2 103771754 103772035 -149484548 - AluJb SINE Alu 0 312 32 3066 205 58 14 chr2 103772073 103772693 -149483890 + MER82 DNA MER2_type 7 653 0 1524 214 48 24 chr2 103772695 103773031 -149483552 - MER2 DNA MER2_type 0 344 1 973 243 59 43 chr2 103773091 103773465 -149483118 - L1ME1 LINE L1 -161 6005 5626 1018 150 42 0 chr2 103773506 103773673 -149482910 - MER20 DNA MER1_type 0 219 46 1648 165 16 44 chr2 103774790 103775106 -149481477 - AluJo SINE Alu -5 307 1 7008 144 53 18 chr2 103775158 103776347 -149480236 - Tigger3b DNA MER2_type 0 1231 1 285 29 0 0 chr2 103776500 103776534 -149480049 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 343 254 53 61 chr2 103777951 103778102 -149478481 - MIR SINE MIR -54 154 35 2057 97 0 4 chr2 103778244 103778513 -149478070 + AluSx SINE Alu 33 300 -12 204 40 0 0 chr2 103782495 103782520 -149474063 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 2565 281 160 13 chr2 103782522 103782579 -149474004 - L2 LINE L2 -12 3301 3254 930 243 14 14 chr2 103782579 103782797 -149473786 - MER58A DNA MER1_type -3 221 4 2565 281 160 13 chr2 103782797 103784199 -149472384 - L2 LINE L2 -59 3254 1638 292 317 106 8 chr2 103784351 103784472 -149472111 + MIR SINE MIR 31 160 -62 1559 141 68 0 chr2 103784477 103784726 -149471857 + L1PB4 LINE L1 5885 6150 -6 2940 216 41 10 chr2 103784884 103785327 -149471256 + L1M4 LINE L1 3801 4277 -1869 516 32 0 0 chr2 103785327 103785389 -149471194 + (CA)n Simple_repeat Simple_repeat 1 62 0 2940 216 41 10 chr2 103785389 103785675 -149470908 + L1M4 LINE L1 4277 4553 -1593 258 231 31 0 chr2 103785919 103785984 -149470599 - L2 LINE L2 -1 3312 3246 249 98 16 49 chr2 103785997 103786058 -149470525 + (GGAGAA)n Simple_repeat Simple_repeat 4 62 0 255 114 0 0 chr2 103786281 103786325 -149470258 + (T)n Simple_repeat Simple_repeat 1 44 0 268 326 34 0 chr2 103788405 103788494 -149468089 - MARNA DNA Mariner -68 518 427 * 453 299 98 25 chr2 103788422 103788553 -149468030 + MARNA DNA Mariner 86 206 -380 8740 118 3 11 chr2 103788553 103790566 -149466017 - L1PA11 LINE L1 0 6174 4103 453 299 98 25 chr2 103790566 103790678 -149465905 + MARNA DNA Mariner 206 347 -239 222 115 58 39 chr2 103790688 103790740 -149465843 + (CCCCAA)n Simple_repeat Simple_repeat 1 53 0 252 331 26 13 chr2 103790759 103790910 -149465673 + MARNA DNA Mariner 410 562 -24 313 277 139 0 chr2 103790933 103791034 -149465549 - L2 LINE L2 0 3313 3199 229 278 21 21 chr2 103792063 103792160 -149464423 + CT-rich Low_complexity Low_complexity 2 98 0 205 303 92 9 chr2 103792401 103792510 -149464073 + MIR SINE MIR 58 175 -87 2781 118 47 11 chr2 103792832 103793281 -149463302 - L1PA11 LINE L1 0 6174 5710 15081 128 29 8 chr2 103793281 103795789 -149460794 + L1M1 LINE L1 623 3184 -4381 1897 71 50 0 chr2 103796343 103796582 -149460001 - AluY SINE Alu -60 251 1 265 264 27 45 chr2 103796997 103797107 -149459476 + L2 LINE L2 3158 3265 -48 516 288 74 37 chr2 103798596 103798839 -149457744 - MIR SINE MIR -3 259 8 845 193 0 0 chr2 103800709 103800854 -149455729 - FRAM SINE Alu -31 145 1 257 272 49 49 chr2 103801665 103801746 -149454837 - L2 LINE L2 -47 3225 3145 2253 100 3 3 chr2 103801831 103802130 -149454453 + AluSx SINE Alu 1 299 -13 661 225 8 0 chr2 103803200 103803329 -149453254 + FLAM_A SINE Alu 4 133 0 230 248 71 88 chr2 103804158 103804271 -149452312 - MIR SINE MIR -14 248 138 277 266 152 18 chr2 103805400 103805513 -149451070 + MIR SINE MIR 30 156 -70 207 167 0 0 chr2 103805584 103805626 -149450957 + (CAT)n Simple_repeat Simple_repeat 1 42 0 2170 102 3 16 chr2 103805651 103805955 -149450628 - AluSx SINE Alu -12 300 1 240 303 135 22 chr2 103805955 103806130 -149450453 - L2 LINE L2 -563 2751 2553 232 308 89 92 chr2 103806200 103806515 -149450068 - L2 LINE L2 -25 3247 2934 685 288 34 0 chr2 103806626 103806803 -149449780 + MIR SINE MIR 80 262 0 394 346 114 60 chr2 103806766 103807997 -149448586 - L2 LINE L2 -776 2538 1242 * 2363 86 7 0 chr2 103808688 103808992 -149447591 + AluSp SINE Alu 1 306 -7 2215 102 3 0 chr2 103810855 103811162 -149445421 + AluSx SINE Alu 1 308 0 1977 153 10 0 chr2 103812862 103813162 -149443421 + AluSx SINE Alu 1 303 -9 363 309 47 0 chr2 103813280 103813429 -149443154 - L1MC4a LINE L1 -1949 5859 5704 2057 131 6 13 chr2 103813538 103813852 -149442731 + AluJo SINE Alu 1 312 0 354 298 19 57 chr2 103813857 103814015 -149442568 - L1MC4a LINE L1 -666 5518 5367 335 346 37 23 chr2 103814235 103814449 -149442134 - L1MC4a LINE L1 -1165 4981 4765 292 231 0 0 chr2 103814455 103814520 -149442063 - MER58 DNA MER1_type 0 2420 2356 728 127 110 98 chr2 103814949 103815194 -149441389 - L1MA9 LINE L1 -1 6311 6064 547 187 32 0 chr2 103815237 103815360 -149441223 + L1MA9 LINE L1 5863 5989 -323 985 132 60 12 chr2 103816751 103816918 -149439665 + AluJo SINE Alu 119 293 -19 2215 92 0 3 chr2 103816925 103817233 -149439350 + AluSq SINE Alu 1 307 0 201 176 0 0 chr2 103817268 103817302 -149439281 + T-rich Low_complexity Low_complexity 1 34 0 1621 126 20 4 chr2 103818122 103818376 -149438207 - L1PB3 LINE L1 0 6154 5897 4608 159 30 28 chr2 103818698 103819882 -149436701 + L1MB5 LINE L1 4994 6166 -8 305 284 131 50 chr2 103821407 103821629 -149434954 - MIR SINE MIR -15 247 8 1711 191 41 7 chr2 103821887 103822181 -149434402 - AluJo SINE Alu -8 304 1 5957 29 0 0 chr2 103822383 103823117 -149433466 - L1PA3 LINE L1 -1354 4792 4059 7764 20 0 1 chr2 103823117 103824440 -149432143 + L1PA3 LINE L1 4818 6152 -3 23 33 0 0 chr2 103825625 103825655 -149430928 + AT_rich Low_complexity Low_complexity 1 30 0 417 265 65 82 chr2 103825715 103825994 -149430589 + HAL1 LINE L1 943 1216 -1291 795 245 97 43 chr2 103826079 103826662 -149429921 + L1ME3A LINE L1 704 1351 -4869 243 316 84 18 chr2 103826691 103826916 -149429667 + L1ME3A LINE L1 1418 1657 -4653 302 316 58 76 chr2 103826986 103827315 -149429268 + L1ME3A LINE L1 1794 2116 -4194 2520 73 0 0 chr2 103827345 103827646 -149428937 + AluSx SINE Alu 1 301 -11 2534 279 109 41 chr2 103827660 103828462 -149428121 + L1ME3A LINE L1 2137 2883 -3246 2151 121 0 0 chr2 103828462 103828760 -149427823 + AluSx SINE Alu 1 298 -14 2534 279 109 41 chr2 103828760 103830832 -149425751 + L1ME3A LINE L1 2883 5205 -924 207 0 0 0 chr2 103830835 103830858 -149425725 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2387 71 3 3 chr2 103830862 103831157 -149425426 - AluY SINE Alu -16 295 1 372 306 90 10 chr2 103831279 103831528 -149425055 + L1ME3A LINE L1 5349 5616 -529 543 308 62 0 chr2 103831549 103831789 -149424794 + L1ME3A LINE L1 5669 5923 -230 2443 61 24 3 chr2 103831887 103832182 -149424401 - AluY SINE Alu -10 301 1 360 318 101 7 chr2 103832661 103832809 -149423774 + HAL1b LINE L1 750 911 -437 2044 141 0 13 chr2 103832997 103833296 -149423287 + AluSx SINE Alu 1 295 -17 2202 101 7 3 chr2 103833442 103833738 -149422845 + AluSg SINE Alu 1 297 -13 182 289 0 0 chr2 103834119 103834164 -149422419 - L2 LINE L2 -15 3257 3213 257 221 29 0 chr2 103834198 103834266 -149422317 + (TA)n Simple_repeat Simple_repeat 1 70 0 2423 93 0 0 chr2 103836393 103836695 -149419888 + AluSx SINE Alu 1 302 -10 29 28 0 0 chr2 103838381 103838417 -149418166 + AT_rich Low_complexity Low_complexity 1 36 0 1714 146 96 0 chr2 103838624 103838905 -149417678 + AluSx SINE Alu 1 308 -4 2289 95 0 13 chr2 103838980 103839285 -149417298 + AluSg SINE Alu 1 301 -9 224 200 0 77 chr2 103839610 103839675 -149416908 - MIR SINE MIR -98 164 105 2310 118 0 0 chr2 103839680 103839985 -149416598 + AluSx SINE Alu 1 305 -7 1820 158 22 76 chr2 103840142 103840552 -149416031 - MLT1B LTR MaLR -2 388 1 761 309 61 48 chr2 103841123 103841580 -149415003 + L1ME2 LINE L1 1 463 -5607 2046 269 93 40 chr2 103841850 103842699 -149413884 + L1ME2 LINE L1 532 1334 -4927 2358 112 0 0 chr2 103842699 103843004 -149413579 - AluSc SINE Alu -4 305 1 2046 269 93 40 chr2 103843004 103843637 -149412946 + L1ME2 LINE L1 1334 1932 -4329 2256 186 24 24 chr2 103843637 103844094 -149412489 - MSTB2 LTR MaLR 0 457 1 2046 269 93 40 chr2 103844094 103844179 -149412404 + L1ME2 LINE L1 1932 2011 -4250 2215 48 48 0 chr2 103844179 103844484 -149412099 - AluY SINE Alu 0 318 1 2046 269 93 40 chr2 103844484 103844656 -149411927 + L1ME2 LINE L1 2011 2388 -3873 5200 225 76 31 chr2 103844716 103845202 -149411381 + L1ME2 LINE L1 3502 3965 -2133 2429 71 0 3 chr2 103845202 103845499 -149411084 + AluY SINE Alu 1 296 -15 5200 225 76 31 chr2 103845499 103847295 -149409288 + L1ME2 LINE L1 3965 5879 -219 257 0 0 29 chr2 103847345 103847360 -149409223 + (TA)n Simple_repeat Simple_repeat 1 15 -18 2269 99 0 7 chr2 103847360 103847652 -149408931 - AluSg SINE Alu -20 290 1 257 0 0 29 chr2 103847652 103847670 -149408913 + (TA)n Simple_repeat Simple_repeat 15 33 0 423 326 145 0 chr2 103847694 103847921 -149408662 - MIR SINE MIR -1 261 2 2465 74 0 3 chr2 103848281 103848578 -149408005 + AluY SINE Alu 1 296 -15 22 35 0 0 chr2 103849378 103849407 -149407176 + AT_rich Low_complexity Low_complexity 1 29 0 2172 107 7 10 chr2 103850252 103850550 -149406033 + AluSx SINE Alu 1 297 -15 36 0 0 0 chr2 103850670 103850706 -149405877 + AT_rich Low_complexity Low_complexity 1 36 0 2127 87 11 0 chr2 103850706 103850981 -149405602 + AluSc SINE Alu 21 298 -11 3195 143 19 13 chr2 103850981 103851518 -149405065 - L1MB3 LINE L1 -5 6178 5639 278 238 238 13 chr2 103851520 103851671 -149404912 + MER112 DNA MER1_type 10 194 -66 300 333 29 0 chr2 103851779 103851917 -149404666 - MIR SINE MIR -12 250 109 458 280 63 34 chr2 103852806 103853013 -149403570 - MIR SINE MIR -18 244 32 1866 137 48 10 chr2 103853703 103853996 -149402587 + AluSx SINE Alu 1 304 -8 312 306 112 12 chr2 103854104 103854274 -149402309 - MIR SINE MIR -55 207 21 22 0 0 0 chr2 103854672 103854694 -149401889 + AT_rich Low_complexity Low_complexity 1 22 0 630 235 155 0 chr2 103854819 103855019 -149401564 - MIR SINE MIR -8 254 24 582 246 8 0 chr2 103855019 103855141 -149401442 - FLAM_A SINE Alu -19 123 1 1015 108 0 161 chr2 103856038 103856261 -149400322 - MER53 DNA DNA -2 187 1 204 292 0 28 chr2 103856342 103856414 -149400169 + GA-rich Low_complexity Low_complexity 6 75 0 22 0 0 0 chr2 103856889 103856911 -149399672 + AT_rich Low_complexity Low_complexity 1 22 0 200 242 32 16 chr2 103857989 103858051 -149398532 - MER5B DNA MER1_type -3 175 113 421 288 20 20 chr2 103858156 103858302 -149398281 - MER5B DNA MER1_type -30 148 3 2415 104 0 0 chr2 103858349 103858658 -149397925 - AluSq SINE Alu -4 309 1 345 306 31 15 chr2 103859102 103859361 -149397222 + L2 LINE L2 1932 2273 -1041 1739 252 31 12 chr2 103859908 103860389 -149396194 + L1MD2 LINE L1 1943 2432 -4108 912 198 6 6 chr2 103860389 103860561 -149396022 + FRAM SINE Alu 1 172 -4 810 141 17 45 chr2 103860561 103860738 -149395845 + L1MD2 LINE L1 2425 2596 -3944 485 192 0 29 chr2 103860741 103860845 -149395738 + L1MD2 LINE L1 5295 5395 -1145 460 160 53 21 chr2 103860864 103860958 -149395625 + MLT1D LTR MaLR 1 97 -408 1502 168 24 0 chr2 103860977 103861227 -149395356 + MLT1D LTR MaLR 248 503 -2 4458 207 78 19 chr2 103861228 103861610 -149394973 + L1MD2 LINE L1 5438 5796 -957 2241 112 7 0 chr2 103861610 103861906 -149394677 + AluSx SINE Alu 1 298 -14 4458 207 78 19 chr2 103861906 103862765 -149393818 + L1MD2 LINE L1 5796 6751 -2 2374 88 0 0 chr2 103863830 103864125 -149392458 + AluSg SINE Alu 1 295 -15 222 300 0 0 chr2 103866503 103866553 -149390030 - MIR SINE MIR -129 79 30 1646 171 44 7 chr2 103867302 103867595 -149388988 + AluJo SINE Alu 1 304 -8 306 123 0 0 chr2 103868259 103868316 -149388267 + (T)n Simple_repeat Simple_repeat 1 57 0 685 235 80 19 chr2 103868984 103869197 -149387386 + MER33 DNA MER1_type 3 228 -96 38 22 0 0 chr2 103869200 103869245 -149387338 + AT_rich Low_complexity Low_complexity 1 45 0 2015 142 7 0 chr2 103869247 103869543 -149387040 + AluSg SINE Alu 3 300 -10 316 202 48 36 chr2 103869566 103869650 -149386933 + MER33 DNA MER1_type 279 363 0 2012 98 73 0 chr2 103870050 103870325 -149386258 + AluSx SINE Alu 1 295 -17 2557 18 7 3 chr2 103873767 103874050 -149382533 + AluY SINE Alu 1 284 -27 244 106 106 0 chr2 103874150 103874197 -149382386 + L1PA15 LINE L1 6113 6164 -1 601 142 22 55 chr2 103874221 103874404 -149382179 + GA-rich Low_complexity Low_complexity 2 178 0 232 94 0 0 chr2 103875324 103875356 -149381227 + MER53 DNA DNA 2 33 -156 395 143 0 0 chr2 103875400 103875463 -149381120 + MER53 DNA DNA 127 189 0 208 262 24 60 chr2 103876481 103876565 -149380018 + MIR SINE MIR 102 182 -80 253 250 19 0 chr2 103877218 103877270 -149379313 - MER94 DNA DNA -59 75 23 4018 154 17 15 chr2 103877317 103877365 -149379218 + L1MB3 LINE L1 5450 5496 -687 2334 105 3 0 chr2 103877365 103877671 -149378912 + AluSx SINE Alu 1 307 -5 4018 154 17 15 chr2 103877671 103878343 -149378240 + L1MB3 LINE L1 5496 6171 -12 1826 126 71 46 chr2 103878785 103879151 -149377432 + THE1C LTR MaLR 1 375 0 1474 192 26 57 chr2 103879699 103880085 -149376498 + MLT1A2 LTR MaLR 1 374 0 1054 186 9 5 chr2 103880166 103880381 -149376202 - L1P LINE L1 -1648 4498 4283 228 213 93 67 chr2 103880381 103880456 -149376127 - MARNA DNA Mariner -269 317 241 386 86 69 0 chr2 103880470 103880528 -149376055 + L1 LINE L1 4109 4170 -1976 2266 112 3 13 chr2 103880528 103880661 -149375922 + AluSx SINE Alu 3 136 -176 2365 97 0 3 chr2 103880661 103880959 -149375624 + AluSx SINE Alu 1 297 -15 2266 112 3 13 chr2 103880959 103881137 -149375446 + AluSx SINE Alu 136 311 -1 853 120 17 0 chr2 103881245 103881362 -149375221 - AluSq/x SINE Alu -162 150 32 243 0 0 0 chr2 103881516 103881543 -149375040 + (T)n Simple_repeat Simple_repeat 1 27 0 240 326 23 12 chr2 103882291 103882377 -149374206 - L2 LINE L2 0 3313 3227 351 134 45 0 chr2 103882990 103883057 -149373526 + L1MC3 LINE L1 6961 7030 -755 2285 85 7 0 chr2 103883058 103883340 -149373243 + AluY SINE Alu 1 284 -27 639 242 38 0 chr2 103883340 103883497 -149373086 + L1MC3 LINE L1 7602 7764 -21 288 313 62 8 chr2 103884146 103884274 -149372309 + L2 LINE L2 3136 3270 -2 2175 95 0 14 chr2 103885001 103885295 -149371288 - AluY SINE Alu -21 290 1 2067 128 6 6 chr2 103885960 103886272 -149370311 + AluSq SINE Alu 1 312 -1 974 180 0 0 chr2 103886424 103886585 -149369998 + FRAM SINE Alu 1 161 -5 1100 184 48 20 chr2 103887484 103887734 -149368849 + AluJb SINE Alu 27 283 -29 606 240 90 43 chr2 103887885 103888118 -149368465 - MIR SINE MIR -10 252 9 367 178 68 0 chr2 103888120 103888193 -149368390 - LTR33A LTR ERVL -3 520 443 286 277 27 36 chr2 103888427 103888539 -149368044 - MLT2E LTR ERVL -483 145 35 2328 94 3 3 chr2 103889044 103889342 -149367241 + AluSx SINE Alu 1 298 -14 213 195 0 0 chr2 103889353 103889394 -149367189 + MER5B DNA MER1_type 1 41 -137 1500 196 16 82 chr2 103889401 103889769 -149366814 - MLT1A1 LTR MaLR 0 365 22 573 149 9 28 chr2 103889869 103889976 -149366607 - MLT1A1 LTR MaLR -260 105 1 358 271 28 9 chr2 103889976 103890083 -149366500 + MER5B DNA MER1_type 44 152 -26 182 189 0 0 chr2 103890296 103890333 -149366250 + MER5B DNA MER1_type 86 122 -56 * 368 206 24 147 chr2 103890326 103890496 -149366087 - MER5B DNA MER1_type -29 149 1 366 281 34 20 chr2 103891562 103891708 -149364875 - MIR3 SINE MIR -4 204 57 1098 146 0 0 chr2 103893444 103893608 -149362975 + FRAM SINE Alu 1 161 -15 1773 164 24 7 chr2 103894145 103894443 -149362140 - AluJb SINE Alu -9 303 1 186 243 14 43 chr2 103894969 103895039 -149361544 - MIR SINE MIR -181 81 14 203 224 92 26 chr2 103897016 103897092 -149359491 - L2 LINE L2 -23 3249 3169 1137 50 0 22 chr2 103897777 103897916 -149358667 - AluYb8 SINE Alu -182 136 1 3967 223 57 13 chr2 103897952 103899465 -149357118 - L1MDa LINE L1 -2666 3874 2289 1219 307 143 29 chr2 103899797 103900657 -149355926 + L2 LINE L2 1860 2817 -497 246 314 16 95 chr2 103900757 103900999 -149355584 + L2 LINE L2 2965 3187 -85 2123 126 3 0 chr2 103903640 103903933 -149352650 - AluSx SINE Alu -18 294 1 21 0 0 0 chr2 103903941 103903962 -149352621 + AT_rich Low_complexity Low_complexity 1 21 0 206 293 67 0 chr2 103907067 103907142 -149349441 + MIR SINE MIR 60 139 -123 26 88 0 0 chr2 103907152 103907220 -149349363 + AT_rich Low_complexity Low_complexity 1 68 0 408 143 0 65 chr2 103907222 103907299 -149349284 + AluSq SINE Alu 82 153 -150 349 311 8 8 chr2 103908787 103908919 -149347664 - MER94 DNA DNA 0 134 3 481 274 132 28 chr2 103909673 103909998 -149346585 + L2 LINE L2 2269 2627 -687 296 236 79 0 chr2 103910087 103910176 -149346407 - L1MD3 LINE L1 -13 7982 7887 237 326 49 93 chr2 103910247 103910569 -149346014 + L2 LINE L2 2833 3133 -139 477 0 0 0 chr2 103910569 103910622 -149345961 + (TG)n Simple_repeat Simple_repeat 2 54 0 237 326 49 93 chr2 103910622 103910731 -149345852 + L2 LINE L2 3133 3245 -27 2210 127 0 0 chr2 103911656 103911964 -149344619 + AluSq SINE Alu 1 308 -5 390 242 51 56 chr2 103913399 103913577 -149343006 - MER20B DNA MER1_type -606 177 1 2183 120 0 0 chr2 103914093 103914376 -149342207 + AluSx SINE Alu 1 283 -29 228 163 163 25 chr2 103964462 103964542 -149292041 + L1ME4a LINE L1 6007 6097 -24 803 78 0 0 chr2 103965420 103965522 -149291061 - AluY SINE Alu -19 292 191 180 0 0 0 chr2 103967580 103967600 -149288983 + (T)n Simple_repeat Simple_repeat 1 20 0 222 118 0 0 chr2 103967694 103967728 -149288855 + (A)n Simple_repeat Simple_repeat 1 34 0 215 363 29 0 chr2 103967784 103967886 -149288697 - MIR SINE MIR -87 121 17 21 0 0 0 chr2 103967998 103968019 -149288564 + AT_rich Low_complexity Low_complexity 1 21 0 972 128 7 0 chr2 103969604 103969745 -149286838 - FLAM_C SINE Alu -1 142 1 1646 75 5 14 chr2 103970779 103970991 -149285592 + AluSp SINE Alu 94 303 -10 318 176 186 0 chr2 103971106 103971208 -149285375 + L1ME4a LINE L1 5995 6115 -6 1599 159 55 45 chr2 103972221 103972530 -149284053 + AluJo SINE Alu 1 312 0 1812 189 36 25 chr2 103973037 103973396 -149283187 - MLT1A1 LTR MaLR 0 365 3 258 315 122 10 chr2 103974007 103974204 -149282379 + L3 LINE CR1 1348 1566 -11 584 321 186 18 chr2 103974786 103975119 -149281464 - L3b LINE CR1 -1 1582 1194 1599 259 105 27 chr2 103975236 103975862 -149280721 + L2 LINE L2 2303 2977 -337 393 246 14 94 chr2 103977433 103977571 -149279012 - L2 LINE L2 0 3313 3187 478 267 199 0 chr2 103977712 103977903 -149278680 - MIR SINE MIR -29 233 5 225 132 0 0 chr2 103978540 103978578 -149278005 + (CA)n Simple_repeat Simple_repeat 1 38 0 578 298 31 44 chr2 103978655 103978887 -149277696 - MIR SINE MIR -5 257 30 2145 108 3 16 chr2 103979448 103979762 -149276821 - AluSg SINE Alu 0 310 1 341 330 146 42 chr2 103980616 103981773 -149274810 - L2 LINE L2 -579 2735 1459 189 0 0 0 chr2 103983522 103983543 -149273040 + (CA)n Simple_repeat Simple_repeat 2 22 0 539 241 138 15 chr2 103983690 103983885 -149272698 + MIR SINE MIR 2 220 -42 2155 104 0 13 chr2 103985137 103985435 -149271148 + AluSx SINE Alu 1 294 -18 183 330 138 28 chr2 103987504 103987613 -149268970 + MIR SINE MIR 92 212 -50 2424 68 0 0 chr2 103988441 103988735 -149267848 + AluY SINE Alu 1 294 -17 262 286 61 10 chr2 103990879 103991085 -149265498 - L1M4 LINE L1 -757 5389 5165 2450 122 16 32 chr2 103991412 103991782 -149264801 + THE1B LTR MaLR 1 364 0 1140 218 134 16 chr2 103994851 103995172 -149261411 + L1ME3A LINE L1 5812 6170 0 2212 92 0 3 chr2 103995183 103995517 -149261066 + AluY SINE Alu 1 333 0 396 338 49 7 chr2 103997189 103997331 -149259252 - L2 LINE L2 -1 3271 3124 188 366 53 46 chr2 103997392 103997676 -149258907 - L2 LINE L2 -123 3149 2864 331 317 17 0 chr2 103997848 103997968 -149258615 - MER103 DNA DNA -2 164 43 289 374 61 19 chr2 103998285 103998547 -149258036 - L2 LINE L2 -801 2513 2241 414 222 10 0 chr2 103999616 103999715 -149256868 + L1MB2 LINE L1 6051 6150 -21 28 48 0 0 chr2 103999758 103999800 -149256783 + AT_rich Low_complexity Low_complexity 1 42 0 2270 111 0 0 chr2 104000898 104001205 -149255378 + AluSx SINE Alu 1 307 -5 29 0 0 0 chr2 104001447 104001476 -149255107 + AT_rich Low_complexity Low_complexity 1 29 0 763 251 168 20 chr2 104002120 104002471 -149254112 + MLT1J LTR MaLR 64 466 -45 21 0 0 0 chr2 104002746 104002767 -149253816 + AT_rich Low_complexity Low_complexity 1 21 0 189 94 0 57 chr2 104002797 104002850 -149253733 + (TAAAAA)n Simple_repeat Simple_repeat 2 51 0 542 300 125 8 chr2 104003232 104003472 -149253111 - L2 LINE L2 -1 3312 3045 1333 151 107 33 chr2 104005268 104005539 -149251044 + AluJo SINE Alu 1 291 -21 499 273 80 6 chr2 104006446 104006622 -149249961 + MIR SINE MIR 74 262 0 2057 101 38 3 chr2 104007105 104007392 -149249191 + AluSx SINE Alu 1 297 -15 365 309 91 27 chr2 104007671 104007891 -149248692 - MIR SINE MIR -13 249 16 897 304 63 39 chr2 104008369 104010258 -149246325 + L1MEd LINE L1 948 2930 -3610 304 266 27 45 chr2 104010307 104010444 -149246139 + L1MEd LINE L1 1852 1990 -4550 314 283 35 80 chr2 104010498 104010630 -149245953 + L1MEd LINE L1 2951 3087 -3453 1804 145 7 39 chr2 104010630 104010940 -149245643 - AluSx SINE Alu -12 300 1 314 283 35 80 chr2 104010940 104011121 -149245462 + L1MEd LINE L1 3087 3250 -3290 2274 100 0 0 chr2 104011523 104011812 -149244771 + AluSx SINE Alu 1 289 -23 796 211 13 0 chr2 104011819 104011971 -149244612 + MER45A DNA AcHobo 1 154 -24 194 251 58 88 chr2 104012272 104012443 -149244140 + L2 LINE L2 2812 2977 -336 209 310 69 35 chr2 104012774 104012861 -149243722 + L2 LINE L2 3175 3264 -8 255 259 17 0 chr2 104012953 104013011 -149243572 + L2 LINE L2 3214 3272 0 1903 162 10 0 chr2 104013492 104013794 -149242789 - AluJb SINE Alu -7 305 1 507 286 41 61 chr2 104014174 104014419 -149242164 + L3 LINE CR1 1337 1576 -1 473 277 119 67 chr2 104014987 104015457 -149241126 - MLT1J LTR MaLR -19 596 1 276 254 95 63 chr2 104016043 104016169 -149240414 - MIR3 SINE MIR -15 193 64 337 288 121 8 chr2 104016379 104016511 -149240072 + MIR SINE MIR 90 236 -26 261 83 0 0 chr2 104017268 104017304 -149239279 + (A)n Simple_repeat Simple_repeat 1 36 0 327 273 183 88 chr2 104020983 104021379 -149235204 - L1M2 LINE L1 -5585 1264 907 258 81 0 0 chr2 104021379 104021416 -149235167 + (CGG)n Simple_repeat Simple_repeat 3 39 0 327 273 183 88 chr2 104021416 104021693 -149234890 - L1M2 LINE L1 -5942 907 527 198 103 0 0 chr2 104021705 104021734 -149234849 + (CGG)n Simple_repeat Simple_repeat 1 29 0 34 84 0 0 chr2 104021825 104021908 -149234675 + GC_rich Low_complexity Low_complexity 1 83 0 290 315 101 17 chr2 104024057 104024235 -149232348 - MIR SINE MIR -3 259 67 747 286 92 5 chr2 104024247 104024464 -149232119 - MIR SINE MIR -6 256 21 208 341 0 35 chr2 104025452 104025537 -149231046 - L2 LINE L2 -1 3312 3231 669 237 129 35 chr2 104026225 104026457 -149230126 + MER112 DNA MER1_type 1 254 -6 23 0 0 0 chr2 104027806 104027829 -149228754 + AT_rich Low_complexity Low_complexity 1 23 0 195 304 25 93 chr2 104027994 104028155 -149228428 + MIR SINE MIR 48 197 -65 292 266 93 43 chr2 104028592 104028731 -149227852 + L3 LINE CR1 1191 1336 -241 249 341 0 12 chr2 104028790 104028872 -149227711 + L3 LINE CR1 1491 1571 -6 344 268 297 0 chr2 104029487 104029625 -149226958 - MER5A DNA MER1_type -1 188 10 3725 133 14 2 chr2 104031565 104032085 -149224498 + MER1A DNA MER1_type 1 526 -1 1792 154 26 0 chr2 104032816 104033089 -149223494 + AluJb SINE Alu 17 296 -16 480 321 148 23 chr2 104033359 104034305 -149222278 - L2 LINE L2 -193 3079 2028 849 214 78 19 chr2 104034932 104035138 -149221445 - MIR SINE MIR -44 218 1 2049 105 0 43 chr2 104035210 104035514 -149221069 + AluSx SINE Alu 1 291 -21 198 103 0 0 chr2 104035515 104035544 -149221039 + (TATG)n Simple_repeat Simple_repeat 3 31 0 478 276 98 6 chr2 104036361 104036524 -149220059 + MIR SINE MIR 20 197 -65 1925 215 31 25 chr2 104037846 104038516 -149218067 - L1M4 LINE L1 -1826 4320 3678 305 254 17 51 chr2 104039227 104039345 -149217238 + MIR SINE MIR 93 206 -56 2235 123 0 0 chr2 104039651 104039959 -149216624 - AluSc SINE Alu -1 308 1 244 274 85 19 chr2 104040307 104040413 -149216170 - L2 LINE L2 -20 3293 3181 318 180 20 80 chr2 104040435 104040535 -149216048 - MIR3 SINE MIR 0 208 115 462 160 0 53 chr2 104041531 104041625 -149214958 - L1MA4A LINE L1 -5 6298 6210 581 227 141 11 chr2 104041723 104041908 -149214675 + MIR SINE MIR 12 220 -42 222 304 0 0 chr2 104041962 104042018 -149214565 + L2 LINE L2 3215 3270 -2 210 284 0 15 chr2 104042336 104042403 -149214180 + CT-rich Low_complexity Low_complexity 4 69 0 222 37 0 0 chr2 104043073 104043100 -149213483 + (TTTTA)n Simple_repeat Simple_repeat 5 31 0 2136 107 3 33 chr2 104043102 104043401 -149213182 - AluSp SINE Alu -23 290 1 327 262 74 41 chr2 104044359 104044481 -149212102 + MIR SINE MIR 124 249 -13 631 228 0 38 chr2 104044927 104045085 -149211498 - L1PB4 LINE L1 0 6156 6005 243 0 0 0 chr2 104045738 104045765 -149210818 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 260 305 74 0 chr2 104045909 104046004 -149210579 - MIR SINE MIR -55 207 106 1590 157 95 40 chr2 104046880 104046954 -149209629 - MER2 DNA MER2_type 0 344 276 2441 85 0 13 chr2 104046954 104047260 -149209323 + AluY SINE Alu 1 302 -9 1590 157 95 40 chr2 104047260 104047510 -149209073 - MER2 DNA MER2_type -68 276 2 238 211 53 0 chr2 104047745 104047802 -149208781 + MIR3 SINE MIR 142 201 -7 21 0 0 0 chr2 104047807 104047828 -149208755 + AT_rich Low_complexity Low_complexity 1 21 0 197 293 40 13 chr2 104048332 104048407 -149208176 + MIR3 SINE MIR 125 201 -7 2212 183 77 35 chr2 104048580 104048941 -149207642 - MLT1D LTR MaLR -5 500 113 1877 151 14 0 chr2 104048941 104049233 -149207350 - AluSx SINE Alu -16 296 1 2212 183 77 35 chr2 104049233 104049351 -149207232 - MLT1D LTR MaLR -392 113 1 2223 199 32 22 chr2 104052643 104053105 -149203478 - MLT1C LTR MaLR 0 467 1 2292 103 48 30 chr2 104053749 104054080 -149202503 - MER1B DNA MER1_type 0 337 1 21 0 0 0 chr2 104054910 104054931 -149201652 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 104055264 104055286 -149201297 + AT_rich Low_complexity Low_complexity 1 22 0 212 222 22 0 chr2 104055387 104055432 -149201151 - L2 LINE L2 -5 3308 3263 207 355 75 0 chr2 104056677 104056784 -149199799 - MIR SINE MIR -19 243 129 218 312 70 70 chr2 104056809 104056995 -149199588 - MER5A DNA MER1_type -2 187 2 316 103 23 0 chr2 104057014 104057067 -149199516 - L1PA12 LINE L1 -299 5873 5816 1189 119 6 6 chr2 104057070 104057246 -149199337 + L1PA13 LINE L1 5983 6158 -5 643 321 71 26 chr2 104057367 104057719 -149198864 - L3 LINE CR1 -3 1574 1207 271 279 147 52 chr2 104058353 104058489 -149198094 + MIR SINE MIR 23 171 -91 2218 88 3 0 chr2 104062068 104062394 -149194189 - AluSp SINE Alu 0 327 1 1030 262 47 86 chr2 104062425 104062777 -149193806 - L1MEd LINE L1 -4893 1226 862 854 129 0 29 chr2 104062777 104062916 -149193667 - L1MB2 LINE L1 -7 6164 6030 2406 82 0 3 chr2 104062925 104063230 -149193353 - AluSq SINE Alu -9 304 1 1030 262 47 86 chr2 104063230 104063534 -149193049 - L1MEd LINE L1 -5265 854 586 244 240 27 27 chr2 104064926 104065001 -149191582 + MLT1F1 LTR MaLR 37 111 -456 1693 224 85 55 chr2 104065009 104065586 -149190997 + L1MD3 LINE L1 7399 7992 -3 39 0 0 0 chr2 104065590 104065629 -149190954 + AT_rich Low_complexity Low_complexity 1 39 0 607 214 173 6 chr2 104065761 104065934 -149190649 + MIR SINE MIR 7 208 -54 777 129 32 0 chr2 104066560 104066684 -149189899 - L1MB8 LINE L1 -10 6168 6041 1577 163 116 39 chr2 104066690 104066919 -149189664 - L1M4 LINE L1 -623 5551 5341 2349 113 0 0 chr2 104066919 104067228 -149189355 - AluSq SINE Alu -4 309 1 1577 163 116 39 chr2 104067228 104067548 -149189035 - L1M4 LINE L1 -833 5341 4957 355 250 21 71 chr2 104067549 104067689 -149188894 + MER68 LTR ERV1 187 319 -243 22 70 0 0 chr2 104067748 104067791 -149188792 + AT_rich Low_complexity Low_complexity 1 43 0 360 227 76 50 chr2 104067867 104067986 -149188597 + MIR SINE MIR 7 129 -79 299 267 67 11 chr2 104068764 104068854 -149187729 - MIR SINE MIR -137 125 31 2266 99 13 0 chr2 104068854 104069156 -149187427 - AluSx SINE Alu -6 306 1 327 235 39 10 chr2 104069287 104069389 -149187194 + MER94 DNA DNA 27 131 -3 866 298 105 23 chr2 104069641 104070080 -149186503 + L3 LINE CR1 61 535 -1042 387 0 0 0 chr2 104070092 104070135 -149186448 + (TG)n Simple_repeat Simple_repeat 1 43 0 761 196 51 25 chr2 104070150 104070308 -149186275 - FRAM SINE Alu -4 162 1 1141 169 10 20 chr2 104070367 104070568 -149186015 + MER58A DNA MER1_type 26 224 0 395 217 59 182 chr2 104070580 104070783 -149185800 + MER5B DNA MER1_type 1 178 0 430 267 130 94 chr2 104070784 104071252 -149185331 + L3 LINE CR1 583 1067 -510 1292 227 129 52 chr2 104071459 104071939 -149184644 - MLT2B1 LTR ERVL 0 520 4 390 296 28 35 chr2 104071939 104072081 -149184502 - MIR3 SINE MIR -51 157 17 289 357 0 18 chr2 104072627 104072739 -149183844 - MIR SINE MIR -34 228 119 621 162 0 0 chr2 104075793 104075892 -149180691 + AluJ/FRAM SINE Alu 214 312 0 2003 109 53 0 chr2 104076001 104076267 -149180316 - AluSg SINE Alu -30 280 1 958 283 202 19 chr2 104076434 104077162 -149179421 - L1MC4 LINE L1 -6 8036 7176 443 262 9 0 chr2 104079068 104079175 -149177408 + MER3 DNA MER1_type 102 209 0 27 0 0 0 chr2 104079435 104079462 -149177121 + AT_rich Low_complexity Low_complexity 1 27 0 202 287 160 11 chr2 104079608 104079702 -149176881 - MIR3 SINE MIR -52 156 49 216 313 11 34 chr2 104080073 104080249 -149176334 + (GGGTG)n Simple_repeat Simple_repeat 3 174 0 457 272 24 8 chr2 104080378 104080503 -149176080 + MIR SINE MIR 12 138 -124 246 298 53 44 chr2 104080600 104080714 -149175869 - MIR SINE MIR -111 151 37 2648 136 18 47 chr2 104080714 104081164 -149175419 - Tigger2 DNA MER2_type -2 2716 2280 333 156 16 47 chr2 104081175 104081239 -149175344 - Tigger2 DNA MER2_type -2656 62 1 648 279 111 76 chr2 104084243 104084826 -149171757 - L2 LINE L2 0 3313 2704 1570 199 7 0 chr2 104087178 104087474 -149169109 - AluJo SINE Alu -14 298 1 275 211 46 28 chr2 104087653 104087727 -149168856 - L1ME4a LINE L1 -3 6118 6040 2350 96 3 3 chr2 104087727 104088040 -149168543 + AluSq SINE Alu 1 313 0 275 211 46 28 chr2 104088040 104088074 -149168509 - L1ME4a LINE L1 -81 6040 6008 430 137 54 0 chr2 104088856 104089090 -149167493 + (TA)n Simple_repeat Simple_repeat 1 246 0 239 221 44 150 chr2 104089264 104089377 -149167206 - MIR SINE MIR -109 153 53 22 0 0 0 chr2 104089436 104089458 -149167125 + AT_rich Low_complexity Low_complexity 1 22 0 2096 115 0 20 chr2 104089960 104090256 -149166327 - AluSx SINE Alu -22 290 1 213 275 0 43 chr2 104090638 104090707 -149165876 + L2 LINE L2 3248 3313 0 2725 32 0 0 chr2 104091495 104091804 -149164779 + AluY SINE Alu 1 309 -2 26 23 0 23 chr2 104091815 104091837 -149164746 + AT_rich Low_complexity Low_complexity 1 22 -21 2113 62 3 106 chr2 104091837 104092158 -149164425 + AluSp SINE Alu 1 288 -25 26 23 0 23 chr2 104092158 104092179 -149164404 + AT_rich Low_complexity Low_complexity 22 43 0 354 316 37 19 chr2 104092179 104092394 -149164189 + L1MC4a LINE L1 5712 5930 -1878 5885 156 9 2 chr2 104092755 104094234 -149162349 + L1PB1 LINE L1 4303 5798 -353 303 49 0 0 chr2 104094234 104094275 -149162308 + (TA)n Simple_repeat Simple_repeat 2 42 0 5885 156 9 2 chr2 104094275 104094632 -149161951 + L1PB1 LINE L1 5798 6151 0 727 280 122 58 chr2 104095550 104096258 -149160325 + L1ME4a LINE L1 5347 6008 -113 3697 194 18 18 chr2 104096258 104096660 -149159923 + L1MB2 LINE L1 5448 5849 -322 1903 159 56 59 chr2 104096660 104097051 -149159532 + MLT1B LTR MaLR 1 390 0 3697 194 18 18 chr2 104097051 104097326 -149159257 + L1MB2 LINE L1 5849 6129 -42 1646 180 7 7 chr2 104097326 104097648 -149158935 + AluJb SINE Alu 1 322 0 3697 194 18 18 chr2 104097648 104097685 -149158898 + L1MB2 LINE L1 6128 6164 -7 727 280 122 58 chr2 104097685 104097698 -149158885 + L1ME4a LINE L1 6008 6114 -7 7607 179 88 17 chr2 104097834 104099467 -149157116 + L1MC3 LINE L1 5396 7144 -641 510 186 47 186 chr2 104099466 104099688 -149156895 + L1ME3A LINE L1 5824 6002 -168 * 2160 101 0 17 chr2 104099688 104099985 -149156598 + AluSc SINE Alu 1 292 -17 510 186 47 186 chr2 104099985 104100037 -149156546 + L1ME3A LINE L1 6002 6060 -110 479 319 51 4 chr2 104100144 104100379 -149156204 - L1M4 LINE L1 -1158 4988 4743 430 231 75 8 chr2 104100462 104100596 -149155987 - L1M4 LINE L1 -1384 4762 4620 246 299 28 56 chr2 104100701 104100808 -149155775 + MLT1I LTR MaLR 232 335 -74 25 0 0 0 chr2 104100809 104100834 -149155749 + AT_rich Low_complexity Low_complexity 1 25 0 23 33 0 0 chr2 104101382 104101412 -149155171 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr2 104101901 104101929 -149154654 + AT_rich Low_complexity Low_complexity 1 28 0 220 206 44 44 chr2 104103091 104103159 -149153424 + MIR3 SINE MIR 5 72 -136 240 321 37 0 chr2 104103195 104103276 -149153307 + L2 LINE L2 3188 3271 -1 280 287 39 70 chr2 104103295 104103424 -149153159 + MIR SINE MIR 82 206 -56 225 0 0 0 chr2 104103678 104103703 -149152880 + (A)n Simple_repeat Simple_repeat 1 25 0 22 35 0 0 chr2 104104027 104104056 -149152527 + AT_rich Low_complexity Low_complexity 1 29 0 839 263 107 48 chr2 104104393 104104872 -149151711 + L1ME4a LINE L1 5410 5916 -205 186 128 0 0 chr2 104104945 104104984 -149151599 + (TA)n Simple_repeat Simple_repeat 1 39 0 666 240 41 61 chr2 104105247 104105529 -149151054 + LTR1 LTR ERV1 3 425 -550 215 294 88 15 chr2 104105677 104105745 -149150838 + L2 LINE L2 3200 3272 0 248 250 164 31 chr2 104105776 104105904 -149150679 - L2 LINE L2 -248 3024 2880 2683 7 0 0 chr2 104105970 104106287 -149150296 + AluYb8 SINE Alu 1 317 0 526 223 9 0 chr2 104106967 104107079 -149149504 - MER103 DNA DNA -51 115 3 199 276 211 0 chr2 104107713 104107789 -149148794 + MIR SINE MIR 52 143 -119 648 289 126 38 chr2 104107995 104108854 -149147729 + HAL1 LINE L1 810 1883 -624 331 261 43 26 chr2 104109478 104109593 -149146990 + HAL1 LINE L1 2245 2361 -146 230 252 126 39 chr2 104109616 104109719 -149146864 + L2 LINE L2 3160 3271 -1 306 333 24 18 chr2 104111504 104111658 -149144925 - MIR3 SINE MIR -52 156 47 3795 105 22 2 chr2 104111985 104112528 -149144055 + MER41A LTR ERV1 1 554 0 505 252 151 14 chr2 104112841 104113059 -149143524 + L3 LINE CR1 1301 1548 -29 315 0 0 0 chr2 104113562 104113597 -149142986 + (TG)n Simple_repeat Simple_repeat 2 36 0 614 236 47 26 chr2 104113867 104114058 -149142525 - MIR SINE MIR 0 262 68 293 310 124 0 chr2 104114340 104114469 -149142114 + Charlie2 DNA MER1_type 6 150 -2632 247 300 340 10 chr2 104114624 104114724 -149141859 - MER91A DNA MER1_type -21 175 43 265 283 85 9 chr2 104114726 104114832 -149141751 + Charlie2 DNA MER1_type 221 334 -2528 2236 101 0 10 chr2 104115623 104115921 -149140662 - AluSx SINE Alu 0 312 18 247 329 0 0 chr2 104115983 104116062 -149140521 - MIR SINE MIR -2 260 182 1434 132 50 64 chr2 104116287 104116568 -149140015 + L1MA8 LINE L1 6011 6287 -4 509 179 26 9 chr2 104116839 104117030 -149139553 + MER33 DNA MER1_type 4 274 -89 978 178 18 6 chr2 104117107 104117270 -149139313 - FRAM SINE Alu -1 165 1 1076 156 12 0 chr2 104117299 104117459 -149139124 + FRAM SINE Alu 2 163 -3 1046 189 24 0 chr2 104117614 104117783 -149138800 - FAM SINE Alu -2 173 1 2377 82 0 3 chr2 104117829 104118132 -149138451 + AluY SINE Alu 1 302 -9 413 273 14 20 chr2 104118168 104118325 -149138258 - L1P2 LINE L1 -297 5824 5684 241 316 60 17 chr2 104118348 104118465 -149138118 - L1ME LINE L1 -516 5605 5484 757 254 280 13 chr2 104118941 104119381 -149137202 - L2 LINE L2 -1 3312 2759 572 238 74 81 chr2 104119382 104119680 -149136903 + MLT1G1 LTR MaLR 2 297 -298 354 257 49 18 chr2 104119763 104119892 -149136691 + MLT1H1 LTR MaLR 449 554 -1 1770 282 91 10 chr2 104119893 104120665 -149135918 - L2 LINE L2 -551 2763 1930 391 305 139 43 chr2 104120745 104121191 -149135392 - L1ME LINE L1 -1307 4839 4351 246 32 0 0 chr2 104121713 104121744 -149134839 + (CA)n Simple_repeat Simple_repeat 2 32 0 2248 103 0 3 chr2 104122836 104123136 -149133447 + AluSx SINE Alu 1 299 -13 274 287 23 0 chr2 104124040 104124127 -149132456 + L1MC/D LINE L1 5697 5785 -2023 256 324 22 44 chr2 104124293 104124429 -149132154 - MIR SINE MIR -51 211 79 203 392 40 0 chr2 104124466 104124591 -149131992 + MIR3 SINE MIR 7 136 -72 237 65 0 0 chr2 104125153 104125184 -149131399 + (ATG)n Simple_repeat Simple_repeat 2 32 0 623 244 109 35 chr2 104125192 104125393 -149131190 - MIR SINE MIR -8 254 39 206 200 0 0 chr2 104125945 104125998 -149130585 + (CA)n Simple_repeat Simple_repeat 1 53 0 210 150 0 0 chr2 104126031 104126071 -149130512 + (CA)n Simple_repeat Simple_repeat 1 40 0 252 86 0 0 chr2 104126385 104126420 -149130163 + (CA)n Simple_repeat Simple_repeat 1 35 0 558 228 0 0 chr2 104128345 104128459 -149128124 - L1MB5 LINE L1 -1 6173 6060 279 313 48 18 chr2 104128472 104128638 -149127945 + Charlie7 DNA MER1_type 2437 2607 -5 180 326 63 63 chr2 104128766 104128987 -149127596 + L2 LINE L2 2737 2957 -357 313 294 194 12 chr2 104129135 104129295 -149127288 + MIR SINE MIR 15 203 -59 817 178 0 0 chr2 104129456 104129591 -149126992 + AluJo SINE Alu 1 135 -177 2067 118 0 56 chr2 104129609 104129931 -149126652 + AluSx SINE Alu 1 304 -8 1570 184 7 14 chr2 104129931 104130224 -149126359 + AluJo SINE Alu 1 292 -20 395 351 69 11 chr2 104130631 104130805 -149125778 + L2 LINE L2 3089 3272 0 327 308 22 0 chr2 104130845 104130936 -149125647 + MIR SINE MIR 54 146 -116 595 204 99 72 chr2 104131934 104132107 -149124476 - MIR SINE MIR -12 250 68 1955 128 17 0 chr2 104132107 104132405 -149124178 + AluSx SINE Alu 1 303 -9 595 204 99 72 chr2 104132405 104132452 -149124131 - MIR SINE MIR -194 68 24 201 152 0 0 chr2 104132454 104132487 -149124096 + CT-rich Low_complexity Low_complexity 2 34 0 204 40 0 0 chr2 104132487 104132512 -149124071 + (CA)n Simple_repeat Simple_repeat 2 26 0 1291 189 9 0 chr2 104132812 104133034 -149123549 + AluJo SINE Alu 1 224 -88 1675 166 3 18 chr2 104133901 104134184 -149122399 + AluJb SINE Alu 1 279 -33 737 22 0 11 chr2 104134190 104134282 -149122301 + (GAAA)n Simple_repeat Simple_repeat 2 92 0 911 132 0 0 chr2 104134341 104134470 -149122113 + AluSg/x SINE Alu 169 297 -13 8089 29 0 5 chr2 104135781 104136744 -149119839 - L1PA4 LINE L1 0 6155 5192 43012 48 2 1 chr2 104136765 104141969 -149114614 - L1PA4 LINE L1 -925 5221 12 1323 256 92 41 chr2 104142830 104143281 -149113302 - LTR33 LTR ERVL 0 521 42 2304 106 7 0 chr2 104143281 104143584 -149112999 + AluSx SINE Alu 1 305 -7 1323 256 92 41 chr2 104143584 104143621 -149112962 - LTR33 LTR ERVL -479 42 8 2392 71 0 0 chr2 104144067 104144375 -149112208 + AluY SINE Alu 1 308 0 1696 220 92 47 chr2 104145010 104145479 -149111104 - LTR16C LTR ERVL -1 490 1 1133 139 0 0 chr2 104145641 104145799 -149110784 + AluSx SINE Alu 1 158 -154 180 0 0 0 chr2 104145828 104145848 -149110735 + (CAA)n Simple_repeat Simple_repeat 2 21 0 248 320 10 0 chr2 104146233 104146330 -149110253 + L1ME LINE L1 155 252 -5953 207 0 0 0 chr2 104146476 104146499 -149110084 + (A)n Simple_repeat Simple_repeat 1 23 0 536 318 76 50 chr2 104147038 104147175 -149109408 + L1ME LINE L1 828 960 -5436 2270 117 3 0 chr2 104147175 104147482 -149109101 - AluSx SINE Alu -4 308 1 536 318 76 50 chr2 104147482 104148274 -149108309 + L1ME LINE L1 960 1782 -4614 2263 118 0 0 chr2 104148698 104149002 -149107581 + AluSp SINE Alu 1 304 -9 225 0 0 0 chr2 104149023 104149048 -149107535 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1243 231 77 96 chr2 104149050 104149275 -149107308 + L1ME LINE L1 2280 2508 -3707 2971 9 0 0 chr2 104149275 104149593 -149106990 + AluYb8 SINE Alu 1 318 0 1243 231 77 96 chr2 104149593 104150116 -149106467 + L1ME LINE L1 2508 3014 -3201 309 314 12 0 chr2 104150121 104150207 -149106376 + L1ME1 LINE L1 142 228 -5977 1213 267 110 4 chr2 104150256 104150709 -149105874 + L1ME1 LINE L1 1408 1908 -4488 427 233 22 11 chr2 104150711 104150801 -149105782 - Tigger7 DNA MER2_type 0 2487 2397 3285 163 10 0 chr2 104150803 104151312 -149105271 - Tigger7 DNA MER2_type -214 519 6 3247 224 53 17 chr2 104151317 104152723 -149103860 + L1ME1 LINE L1 1907 3310 -2905 2280 234 76 29 chr2 104152882 104152956 -149103627 - L1MD2 LINE L1 -133 6226 6157 203 0 37 0 chr2 104152956 104152983 -149103600 + (TG)n Simple_repeat Simple_repeat 2 29 0 2280 234 76 29 chr2 104152983 104153529 -149103054 - L1MD2 LINE L1 -202 6157 5577 3213 219 38 23 chr2 104153529 104154693 -149101890 + L1ME1 LINE L1 5051 6230 -5 1187 257 45 68 chr2 104154718 104155318 -149101265 + L1ME LINE L1 3572 4157 -2058 181 324 44 0 chr2 104156007 104156075 -149100508 - MIR SINE MIR -135 127 57 1807 77 0 5 chr2 104156099 104156320 -149100263 - AluY SINE Alu -91 220 1 2199 110 0 0 chr2 104157098 104157390 -149099193 + AluSx SINE Alu 1 292 -20 579 309 84 57 chr2 104158114 104158274 -149098309 + ERVL LTR ERVL 1649 1803 -3961 2236 100 3 0 chr2 104158274 104158565 -149098018 - AluSx SINE Alu 0 312 21 579 309 84 57 chr2 104158565 104158773 -149097810 + ERVL LTR ERVL 1803 2027 -3737 929 209 147 86 chr2 104158862 104159274 -149097309 + MER66A LTR ERV1 97 474 -4 1112 309 54 22 chr2 104159279 104159726 -149096857 + ERVL LTR ERVL 2036 2496 -3268 2348 90 10 0 chr2 104159968 104160268 -149096315 + AluY SINE Alu 1 303 -8 553 251 89 18 chr2 104160607 104160954 -149095629 + LTR33 LTR ERVL 64 521 0 356 88 18 0 chr2 104161924 104161981 -149094602 + (TG)n Simple_repeat Simple_repeat 2 59 0 1994 117 0 47 chr2 104162026 104162326 -149094257 + AluSq SINE Alu 21 306 -7 628 266 6 23 chr2 104162704 104162881 -149093702 - MIR SINE MIR -64 198 25 418 214 78 0 chr2 104163051 104163154 -149093429 + MER81 DNA DNA 2 112 -2 23 54 0 0 chr2 104164497 104164534 -149092049 + AT_rich Low_complexity Low_complexity 1 37 0 236 75 0 25 chr2 104165031 104165071 -149091512 + (GA)n Simple_repeat Simple_repeat 1 39 0 723 269 140 15 chr2 104166005 104166347 -149090236 - L2 LINE L2 -10 3303 2919 225 180 0 0 chr2 104166768 104166818 -149089765 + CT-rich Low_complexity Low_complexity 1 50 0 2147 125 0 7 chr2 104167535 104167838 -149088745 - AluSx SINE Alu -11 301 1 611 268 195 21 chr2 104167869 104168249 -149088334 - MLT1J2 LTR MaLR 0 450 5 279 213 187 0 chr2 104168316 104168391 -149088192 - MIR3 SINE MIR -31 177 89 539 225 41 0 chr2 104168674 104168843 -149087740 - HsTC2 DNA Tc2 0 1898 1723 3558 167 33 19 chr2 104168856 104168886 -149087697 - L1MB3 LINE L1 -22 6161 6133 1608 196 3 20 chr2 104168886 104169182 -149087401 - AluJo SINE Alu -21 291 1 3558 167 33 19 chr2 104169182 104169839 -149086744 - L1MB3 LINE L1 -50 6133 5464 1394 260 45 40 chr2 104169839 104170285 -149086298 - HsTC2 DNA Tc2 -157 1741 1294 1350 275 105 12 chr2 104170306 104170569 -149086014 + L1ME3A LINE L1 4410 4647 -1523 1585 153 88 0 chr2 104170569 104170852 -149085731 - AluJb SINE Alu 0 306 1 1350 275 105 12 chr2 104170852 104171814 -149084769 + L1ME3A LINE L1 4647 5809 -361 281 228 18 0 chr2 104171815 104171872 -149084711 - MER58 DNA MER1_type -1 2419 2362 327 235 206 0 chr2 104171894 104171996 -149084587 - MER58 DNA MER1_type -2297 123 1 973 267 112 6 chr2 104172004 104172326 -149084257 + L1ME3A LINE L1 5810 6165 -5 251 214 18 0 chr2 104172578 104172634 -149083949 + GA-rich Low_complexity Low_complexity 1 57 0 2338 102 0 0 chr2 104173074 104173427 -149083156 + AluSx SINE Alu 10 362 0 804 216 20 78 chr2 104174324 104174428 -149082155 + MER45 DNA AcHobo 1 89 -951 2396 73 0 13 chr2 104174428 104174731 -149081852 - AluY SINE Alu -12 299 1 804 216 20 78 chr2 104174731 104174830 -149081753 + MER45 DNA AcHobo 89 192 -848 2039 111 7 0 chr2 104174860 104175130 -149081453 - AluSx SINE Alu -18 294 23 520 178 0 37 chr2 104175160 104175267 -149081316 + MER45 DNA AcHobo 1479 1581 0 409 105 40 0 chr2 104175288 104175364 -149081219 + A-rich Low_complexity Low_complexity 2 80 0 260 248 150 26 chr2 104175625 104175738 -149080845 + L2 LINE L2 2667 2793 -521 572 313 96 22 chr2 104175770 104176176 -149080407 - MLT1L LTR MaLR -33 582 147 288 0 0 0 chr2 104176532 104176564 -149080019 + (CA)n Simple_repeat Simple_repeat 2 33 0 275 297 166 14 chr2 104176627 104176772 -149079811 + Charlie8 DNA MER1_type 11 177 -2240 5016 126 27 12 chr2 104176791 104177562 -149079021 - LTR39 LTR ERV1 0 783 1 481 245 95 65 chr2 104177657 104177857 -149078726 - LTR33 LTR ERVL -301 220 15 682 152 34 12 chr2 104178833 104178965 -149077618 + L1MB1 LINE L1 6041 6169 -20 2338 104 3 0 chr2 104180283 104180592 -149075991 - AluSp SINE Alu -3 310 1 344 281 55 34 chr2 104182054 104182200 -149074383 + L1MB5 LINE L1 6026 6174 0 486 256 71 12 chr2 104183023 104183191 -149073392 - MIR SINE MIR -50 212 35 191 341 11 11 chr2 104183245 104183333 -149073250 - L2 LINE L2 -32 3240 3153 2729 96 41 19 chr2 104183484 104183903 -149072680 + MSTA LTR MaLR 1 428 0 264 284 39 20 chr2 104183986 104184088 -149072495 + MIR SINE MIR 111 214 -48 1967 173 4 5 chr2 104185384 104185868 -149070715 + MER74A LTR ERVL 49 558 0 249 303 0 11 chr2 104186449 104186538 -149070045 - L2 LINE L2 -43 3270 3183 2332 108 0 9 chr2 104186976 104187291 -149069292 - AluSx SINE Alu 0 312 1 418 265 23 23 chr2 104188761 104188893 -149067690 - MIR3 SINE MIR -36 172 41 1926 158 0 3 chr2 104189378 104189675 -149066908 + AluJb SINE Alu 5 300 -12 6647 134 7 12 chr2 104192584 104193806 -149062777 - L1MA4 LINE L1 -11 6289 5072 2157 131 0 0 chr2 104194456 104194754 -149061829 - AluSx SINE Alu 0 312 15 617 213 82 74 chr2 104194754 104194998 -149061585 - L1MC4 LINE L1 0 8042 7797 2143 206 58 55 chr2 104195011 104195548 -149061035 - MLT1E LTR MaLR -8 585 44 1884 131 62 0 chr2 104195548 104195822 -149060761 + AluSx SINE Alu 1 291 -21 2143 206 58 55 chr2 104195822 104195867 -149060716 - MLT1E LTR MaLR -549 44 1 782 164 211 88 chr2 104195891 104196209 -149060374 - L1MC4 LINE L1 -588 7454 7098 1570 174 9 29 chr2 104196773 104197089 -149059494 - L1MC4 LINE L1 -964 7078 6769 194 353 15 8 chr2 104197396 104197529 -149059054 - MIR3 SINE MIR -38 170 37 224 302 31 10 chr2 104198057 104198153 -149058430 - MIR SINE MIR -79 183 86 234 292 42 0 chr2 104198816 104198888 -149057695 + MIR SINE MIR 36 110 -152 298 176 135 0 chr2 104198959 104199033 -149057550 + MER69 DNA AcHobo 2436 2519 -7 423 341 17 6 chr2 104199337 104199513 -149057070 + MER5B DNA MER1_type 1 178 0 502 268 16 0 chr2 104199824 104199951 -149056632 - MIR SINE MIR -70 192 64 998 149 0 0 chr2 104200639 104200780 -149055803 + AluSq/x SINE Alu 1 141 -171 29 47 0 0 chr2 104200800 104200843 -149055740 + AT_rich Low_complexity Low_complexity 1 43 0 182 280 0 0 chr2 104201054 104201104 -149055479 - MIR3 SINE MIR -21 187 138 534 194 124 0 chr2 104201147 104201276 -149055307 - LTR16A LTR ERVL -72 378 234 208 250 73 29 chr2 104201604 104201672 -149054911 - MIR3 SINE MIR -52 156 86 389 359 38 22 chr2 104202974 104203158 -149053425 + MIR SINE MIR 14 200 -62 707 199 52 124 chr2 104203705 104203792 -149052791 + MLT2D LTR ERVL 131 223 -191 189 0 0 0 chr2 104203792 104203813 -149052770 + (TC)n Simple_repeat Simple_repeat 2 22 0 2024 159 0 3 chr2 104203813 104204108 -149052475 - AluSx SINE Alu -17 295 2 707 199 52 124 chr2 104204108 104204325 -149052258 + MLT2D LTR ERVL 221 414 0 1617 218 11 8 chr2 104204328 104204695 -149051888 - L1M4 LINE L1 -2344 3802 3435 207 0 0 0 chr2 104205421 104205444 -149051139 + (TTG)n Simple_repeat Simple_repeat 2 24 0 237 292 42 25 chr2 104205588 104205708 -149050875 + L2 LINE L2 2570 2691 -623 833 247 192 9 chr2 104205713 104206041 -149050542 + L2 LINE L2 2853 3240 -73 3275 273 181 26 chr2 104206541 104208536 -149048047 + L2 LINE L2 1006 3309 -4 389 311 77 68 chr2 104208676 104209027 -149047556 + L1ME4a LINE L1 5328 5681 -440 309 336 19 0 chr2 104209055 104209162 -149047421 + L1ME4a LINE L1 5762 5870 -251 1394 196 67 90 chr2 104209945 104210424 -149046159 - L1MD2 LINE L1 -2 6357 5890 848 229 22 0 chr2 104210417 104210640 -149045943 - L1MD2 LINE L1 -746 5400 5173 * 656 231 81 0 chr2 104210657 104210843 -149045740 - L1M4 LINE L1 -894 5252 5052 4985 235 71 21 chr2 104210843 104213598 -149042985 + L1MDb LINE L1 87 3025 -3381 2398 93 0 6 chr2 104213598 104213909 -149042674 + AluSc SINE Alu 1 309 0 4985 235 71 21 chr2 104213909 104214082 -149042501 + L1MDb LINE L1 3025 3188 -3218 925 294 154 27 chr2 104214437 104214817 -149041766 + L2 LINE L2 2145 2618 -696 2238 114 11 43 chr2 104214817 104215193 -149041390 + THE1B LTR MaLR 1 364 0 925 294 154 27 chr2 104215193 104215364 -149041219 + L2 LINE L2 2618 2766 -548 407 252 91 28 chr2 104215366 104215509 -149041074 + L2 LINE L2 3162 3313 0 702 151 118 0 chr2 104215769 104215888 -149040695 + FLAM_C SINE Alu 1 133 0 21 0 0 0 chr2 104216252 104216273 -149040310 + AT_rich Low_complexity Low_complexity 1 21 0 473 315 97 31 chr2 104217451 104217841 -149038742 + L1ME LINE L1 5405 5820 -301 239 345 27 45 chr2 104218294 104218404 -149038179 + MIR3 SINE MIR 76 183 -25 200 281 85 37 chr2 104218565 104218647 -149037936 + L2 LINE L2 1344 1429 -1885 326 249 50 2 chr2 104219239 104219347 -149037236 - MIR SINE MIR -92 116 23 202 219 16 47 chr2 104219658 104219722 -149036861 + GA-rich Low_complexity Low_complexity 1 62 0 1730 165 223 0 chr2 104219767 104220149 -149036434 + MLT1C LTR MaLR 1 467 0 191 348 87 11 chr2 104220921 104221013 -149035570 + L2 LINE L2 3152 3250 -22 482 298 158 9 chr2 104222794 104223022 -149033561 - MIR SINE MIR 0 262 1 654 133 10 0 chr2 104227487 104227585 -149028998 + AluSx SINE Alu 2 100 -212 441 234 92 35 chr2 104227586 104227727 -149028856 + MLT1F LTR MaLR 388 536 -6 249 225 42 14 chr2 104227735 104227806 -149028777 - MLT1F LTR MaLR -117 425 353 1389 124 0 48 chr2 104228084 104228293 -149028290 + AluSx SINE Alu 99 297 -15 816 279 87 49 chr2 104228348 104228875 -149027708 - MLT1H1 LTR MaLR 0 555 9 225 240 58 87 chr2 104229088 104229192 -149027391 + L2 LINE L2 3172 3272 -41 320 262 11 0 chr2 104230120 104230414 -149026169 + (TG)n Simple_repeat Simple_repeat 1 297 0 3560 173 63 86 chr2 104231666 104232160 -149024423 - L1MC1 LINE L1 -1 6332 5828 1792 140 8 0 chr2 104232160 104232425 -149024158 - AluSx SINE Alu -11 301 35 539 100 0 0 chr2 104232425 104232495 -149024088 - AluS SINE Alu -242 71 2 3560 173 63 86 chr2 104232495 104232957 -149023626 - L1MC1 LINE L1 -503 5830 5329 329 257 64 0 chr2 104233231 104233340 -149023243 - MER94 DNA DNA -1 133 18 560 259 105 0 chr2 104233730 104233873 -149022710 + MIR SINE MIR 105 262 0 218 302 160 24 chr2 104233932 104234101 -149022482 - MIR SINE MIR -13 249 58 240 35 0 0 chr2 104234139 104234168 -149022415 + (TC)n Simple_repeat Simple_repeat 1 29 0 207 0 0 0 chr2 104234167 104234190 -149022393 + (CA)n Simple_repeat Simple_repeat 1 23 0 * 468 265 90 12 chr2 104234233 104234399 -149022184 + MLT1C LTR MaLR 199 377 -90 356 267 46 76 chr2 104234635 104234734 -149021849 + L1ME LINE L1 5306 5394 -770 1927 155 34 0 chr2 104234734 104235025 -149021558 + AluJb SINE Alu 1 301 -11 356 267 46 76 chr2 104235025 104235124 -149021459 + L1ME LINE L1 5394 5494 -670 2096 137 0 10 chr2 104235137 104235443 -149021140 - AluSx SINE Alu -9 303 1 2347 94 3 3 chr2 104235764 104236061 -149020522 - AluSx SINE Alu -11 301 5 399 149 0 0 chr2 104236189 104236263 -149020320 + (TG)n Simple_repeat Simple_repeat 1 74 0 803 205 119 36 chr2 104237483 104237761 -149018822 + MER33 DNA MER1_type 1 301 -23 2184 106 34 0 chr2 104237910 104238203 -149018380 - AluY SINE Alu -8 303 1 431 256 51 15 chr2 104238222 104238359 -149018224 + MER97b DNA MER1_type? 21 162 -891 1358 166 87 38 chr2 104238704 104239048 -149017535 - MLT1A1 LTR MaLR -1 364 4 715 179 22 125 chr2 104239149 104239333 -149017250 + MIR SINE MIR 34 198 -64 661 258 18 0 chr2 104239338 104239505 -149017078 + Tigger7 DNA MER2_type 1 170 -563 * 1591 136 50 13 chr2 104239500 104239801 -149016782 + Tigger7 DNA MER2_type 2268 2579 -8 196 273 81 20 chr2 104239905 104240004 -149016579 + L2 LINE L2 3205 3309 -4 432 151 0 113 chr2 104240477 104240583 -149016000 - MLT2D LTR ERVL -10 404 311 628 297 22 0 chr2 104241156 104241341 -149015242 - MER5A DNA MER1_type 0 189 1 2308 102 0 0 chr2 104241421 104241724 -149014859 + AluSx SINE Alu 1 303 -9 261 266 62 0 chr2 104241929 104241993 -149014590 + MER5A DNA MER1_type 122 189 0 471 249 195 39 chr2 104242216 104242421 -149014162 - MIR SINE MIR -12 250 14 448 262 35 119 chr2 104243414 104243758 -149012825 - MLT1J LTR MaLR -50 461 147 439 270 226 15 chr2 104243840 104244044 -149012539 - MIR SINE MIR 0 262 16 22 0 0 0 chr2 104244552 104244574 -149012009 + AT_rich Low_complexity Low_complexity 1 22 0 221 137 27 41 chr2 104245047 104245120 -149011463 + CT-rich Low_complexity Low_complexity 3 74 0 537 240 77 97 chr2 104245324 104245520 -149011063 + MIR SINE MIR 27 218 -44 352 308 38 13 chr2 104245757 104245916 -149010667 + LTR65 LTR ERV1 1 163 -506 269 185 15 0 chr2 104246565 104246630 -149009953 + CT-rich Low_complexity Low_complexity 1 66 0 1038 314 67 49 chr2 104248048 104248847 -149007736 - HERV16 LTR ERVL -1174 3822 3139 1492 137 30 123 chr2 104249121 104249494 -149007089 - MLT1B LTR MaLR -52 338 1 2266 305 90 20 chr2 104249537 104251137 -149005446 - HERV16 LTR ERVL -1905 3091 1328 933 318 25 22 chr2 104251178 104251533 -149005050 - HERV16 LTR ERVL -3957 1039 684 884 246 111 40 chr2 104251616 104251763 -149004820 - HERV16 LTR ERVL -4677 319 145 3888 180 29 92 chr2 104251763 104252797 -149003786 + LTR5 LTR ERVK 1 969 0 884 246 111 40 chr2 104252797 104252901 -149003682 - HERV16 LTR ERVL -4851 145 50 851 292 121 9 chr2 104252927 104253273 -149003310 - LTR16A LTR ERVL -2 448 64 411 248 10 0 chr2 104253338 104253439 -149003144 + MLT1I LTR MaLR 308 409 0 642 215 0 0 chr2 104253739 104253860 -149002723 - MER3 DNA MER1_type -57 152 32 229 170 43 0 chr2 104253854 104253901 -149002682 + LTR10B LTR ERV1 457 505 0 * 1098 166 131 124 chr2 104253945 104254208 -149002375 + MER69 DNA AcHobo 1970 2230 -296 1701 196 4 0 chr2 104254208 104254489 -149002094 + AluJo SINE Alu 1 282 -30 201 74 0 0 chr2 104254498 104254525 -149002058 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1098 166 131 124 chr2 104254525 104254800 -149001783 + MER69 DNA AcHobo 2237 2522 -4 1403 237 58 27 chr2 104254912 104255360 -149001223 + MLT1C LTR MaLR 6 467 0 1491 211 116 19 chr2 104256438 104256902 -148999681 + MER74B LTR ERVL 55 563 -59 192 152 0 0 chr2 104257909 104257942 -148998641 + (CATATA)n Simple_repeat Simple_repeat 1 33 0 6671 210 65 10 chr2 104258107 104260467 -148996116 + HERVL74 LTR ERVL 1125 3643 -2042 906 183 7 0 chr2 104260479 104260632 -148995951 + HERVL74 LTR ERVL 3920 4073 -1612 * 1972 221 87 34 chr2 104260620 104261243 -148995340 + HERVL74 LTR ERVL 4586 5241 -444 827 228 18 36 chr2 104261273 104261492 -148995091 + HERVL74 LTR ERVL 5381 5595 -90 1415 234 125 32 chr2 104261523 104261994 -148994589 + MER74B LTR ERVL 41 555 -67 2294 90 0 23 chr2 104262484 104262785 -148993798 + AluSg SINE Alu 1 294 -16 21 0 0 0 chr2 104264798 104264819 -148991764 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 104264861 104264882 -148991701 + AT_rich Low_complexity Low_complexity 1 21 0 1407 174 163 31 chr2 104267508 104267900 -148988683 + MLT1D LTR MaLR 62 505 0 377 279 82 94 chr2 104269240 104269580 -148987003 - L1ME4a LINE L1 -226 5895 5560 346 306 81 12 chr2 104269740 104269913 -148986670 + MIR3 SINE MIR 10 194 -14 1681 242 33 31 chr2 104270460 104270944 -148985639 - L1ME2 LINE L1 -2 6162 5678 648 288 6 6 chr2 104271120 104271283 -148985300 + MER58A DNA MER1_type 1 163 0 2378 98 0 3 chr2 104271443 104271748 -148984835 - AluY SINE Alu -7 304 1 1511 179 0 52 chr2 104271830 104272147 -148984436 + AluJo SINE Alu 9 310 0 314 258 98 15 chr2 104272990 104273122 -148983461 + L1MCc LINE L1 17 159 -6264 263 253 114 63 chr2 104273142 104273300 -148983283 + L1MCc LINE L1 224 389 -6034 198 307 114 11 chr2 104273945 104274033 -148982550 - MIR SINE MIR -138 124 28 322 236 99 68 chr2 104274314 104274475 -148982108 - L1MCc LINE L1 -6034 389 224 452 196 27 68 chr2 104274495 104274643 -148981940 - L1MCc LINE L1 -6265 158 17 380 328 85 43 chr2 104274653 104275028 -148981555 - L1ME2 LINE L1 -960 5186 4796 467 333 35 12 chr2 104275097 104275352 -148981231 - L1ME2 LINE L1 -1478 4668 4408 356 156 16 0 chr2 104275386 104275450 -148981133 + MLT1J1 LTR MaLR 35 99 -347 924 121 0 0 chr2 104275767 104275891 -148980692 - FLAM_C SINE Alu -19 124 1 250 200 175 0 chr2 104276902 104276982 -148979601 - L1MB3 LINE L1 -3 6180 6087 39 22 0 0 chr2 104276986 104277032 -148979551 + AT_rich Low_complexity Low_complexity 1 46 0 772 180 0 23 chr2 104277032 104277160 -148979423 - FLAM_C SINE Alu -17 126 2 204 125 0 0 chr2 104278200 104278232 -148978351 + (TG)n Simple_repeat Simple_repeat 1 32 0 242 284 108 0 chr2 104279031 104279133 -148977450 - L2 LINE L2 0 3272 3160 2379 71 0 29 chr2 104279137 104279448 -148977135 - AluY SINE Alu -9 302 1 22 56 0 0 chr2 104281626 104281662 -148974921 + AT_rich Low_complexity Low_complexity 1 36 0 249 108 0 0 chr2 104282187 104282224 -148974359 + (CA)n Simple_repeat Simple_repeat 2 38 0 809 62 0 18 chr2 104282259 104282371 -148974212 - L1PA5 LINE L1 0 6154 6045 282 305 64 32 chr2 104283835 104284022 -148972561 + L3 LINE CR1 681 873 -704 301 329 41 27 chr2 104284214 104284360 -148972223 + L3 LINE CR1 1201 1348 -229 1043 261 67 53 chr2 104285615 104286159 -148970424 - L1M4c LINE L1 -4786 1860 1299 1575 192 41 0 chr2 104286159 104286451 -148970132 - AluJo SINE Alu -8 304 1 1043 261 67 53 chr2 104286451 104286636 -148969947 - L1M4c LINE L1 -5347 1299 1118 2006 131 0 30 chr2 104286636 104286941 -148969642 - AluSg SINE Alu -14 296 1 218 271 125 10 chr2 104287523 104287619 -148968964 + L2 LINE L2 2199 2305 -1009 363 219 49 131 chr2 104287829 104287911 -148968672 - MER69A DNA AcHobo -2356 170 110 2143 86 0 80 chr2 104287911 104288224 -148968359 - AluSx SINE Alu -24 288 1 363 219 49 131 chr2 104288224 104288324 -148968259 - MER69A DNA AcHobo -2416 110 3 2464 51 0 0 chr2 104288936 104289230 -148967353 - AluY SINE Alu -17 294 1 1596 147 33 13 chr2 104289589 104289889 -148966694 + L1MA8 LINE L1 5981 6286 -5 1608 106 5 5 chr2 104290098 104290315 -148966268 + AluY SINE Alu 1 217 -94 24 0 0 0 chr2 104290329 104290353 -148966230 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr2 104290787 104290809 -148965774 + AT_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr2 104290822 104290858 -148965725 + AT_rich Low_complexity Low_complexity 1 36 0 2388 93 0 7 chr2 104291681 104291983 -148964600 - AluSx SINE Alu -12 300 1 780 274 34 0 chr2 104292692 104292929 -148963654 - L1M4 LINE L1 -3297 2849 2605 248 192 41 14 chr2 104295222 104295295 -148961288 + (TA)n Simple_repeat Simple_repeat 2 76 0 1967 177 42 69 chr2 104295505 104295985 -148960598 - MLT1C LTR MaLR 0 467 1 34 24 0 0 chr2 104295990 104296031 -148960552 + AT_rich Low_complexity Low_complexity 1 41 0 2670 245 47 10 chr2 104296144 104297007 -148959576 + L1M4 LINE L1 3217 4120 -2026 416 186 31 21 chr2 104297007 104297104 -148959479 + L1MB8 LINE L1 5829 5926 -252 364 222 11 0 chr2 104297253 104297343 -148959240 - L1MC5 LINE L1 -392 7569 7479 795 176 65 0 chr2 104297355 104297508 -148959075 - FRAM SINE Alu -6 170 8 1794 202 78 70 chr2 104297582 104298182 -148958401 - L1MC5 LINE L1 -724 7237 6633 21 36 0 0 chr2 104298227 104298255 -148958328 + AT_rich Low_complexity Low_complexity 1 28 0 31 26 0 0 chr2 104298338 104298376 -148958207 + AT_rich Low_complexity Low_complexity 1 38 0 189 0 0 0 chr2 104298413 104298434 -148958149 + (TAA)n Simple_repeat Simple_repeat 2 22 0 1298 185 0 0 chr2 104299316 104299516 -148957067 + AluJo SINE Alu 83 282 -30 2492 60 3 10 chr2 104300369 104300671 -148955912 + AluY SINE Alu 1 300 -11 2129 121 0 23 chr2 104301043 104301350 -148955233 - AluSg SINE Alu -10 300 1 217 295 0 0 chr2 104301981 104302042 -148954541 + L2 LINE L2 3250 3310 -3 304 248 58 109 chr2 104302407 104302544 -148954039 + L1ME4a LINE L1 5841 5970 -151 2056 116 17 0 chr2 104302646 104302948 -148953635 - AluSx SINE Alu -5 307 1 206 347 0 0 chr2 104303243 104303292 -148953291 - L2 LINE L2 -78 3194 3146 244 248 73 95 chr2 104303507 104303644 -148952939 - L2 LINE L2 -483 2831 2698 410 257 40 68 chr2 104303975 104304123 -148952460 + MER5B DNA MER1_type 35 178 0 257 210 48 32 chr2 104304140 104304202 -148952381 - MER5A DNA MER1_type -6 183 121 1920 98 0 4 chr2 104305562 104305828 -148950755 - AluSq SINE Alu -48 265 1 1414 201 17 3 chr2 104305832 104306126 -148950457 - AluJo SINE Alu -14 298 1 232 273 20 91 chr2 104307269 104307368 -148949215 - MIR SINE MIR -94 114 23 3232 162 38 30 chr2 104308073 104308677 -148947906 + LTR1 LTR ERV1 1 609 -176 261 274 12 36 chr2 104308795 104308879 -148947704 + L2 LINE L2 3192 3273 -40 1068 315 48 67 chr2 104308900 104309363 -148947220 + L2 LINE L2 2221 2654 -618 2179 98 3 25 chr2 104309363 104309681 -148946902 - AluSp SINE Alu -2 311 1 1068 315 48 67 chr2 104309681 104310068 -148946515 + L2 LINE L2 2654 3047 -225 2861 213 150 108 chr2 104310086 104310410 -148946173 - MLT1A2-int LTR MaLR -155 1216 907 778 89 0 0 chr2 104310410 104310511 -148946072 - AluJ/FLAM SINE Alu -210 102 2 2861 213 150 108 chr2 104310511 104311099 -148945484 - MLT1A2-int LTR MaLR -464 907 146 2241 101 3 0 chr2 104311099 104311405 -148945178 - AluSx SINE Alu -5 307 1 2861 213 150 108 chr2 104311405 104311550 -148945033 - MLT1A2-int LTR MaLR -1225 146 9 1808 208 33 16 chr2 104311556 104311922 -148944661 - MLT1A2 LTR MaLR -2 372 1 21 0 0 0 chr2 104314667 104314688 -148941895 + AT_rich Low_complexity Low_complexity 1 21 0 2368 222 46 18 chr2 104315234 104316019 -148940564 + L1MEc LINE L1 1864 2634 -3581 2473 95 9 3 chr2 104316019 104316365 -148940218 + L1PA10 LINE L1 5810 6157 -11 2368 222 46 18 chr2 104316365 104316573 -148940010 + L1MEc LINE L1 2634 2835 -3380 2984 234 69 20 chr2 104316596 104317358 -148939225 + L1ME1 LINE L1 5131 5939 -227 1937 128 17 7 chr2 104317358 104317655 -148938928 + AluJb SINE Alu 1 300 -12 2984 234 69 20 chr2 104317655 104317846 -148938737 + L1ME1 LINE L1 5939 6119 -47 853 151 0 0 chr2 104317861 104317987 -148938596 - FLAM_C SINE Alu -17 126 1 243 188 0 31 chr2 104317987 104318051 -148938532 + L1MA10 LINE L1 6269 6330 -4 231 329 6 35 chr2 104318095 104318265 -148938318 + L1MEc LINE L1 3032 3196 -3019 510 305 104 14 chr2 104318370 104318719 -148937864 + L1M4 LINE L1 2112 2491 -3655 2186 56 26 10 chr2 104318809 104319114 -148937469 - AluY SINE Alu -1 310 1 3386 99 2 9 chr2 104319228 104319691 -148936892 + MER9 LTR ERVK 52 511 0 253 250 73 0 chr2 104320173 104320241 -148936342 + MER5C DNA MER1_type 58 130 -194 39 60 0 0 chr2 104320408 104320475 -148936108 + AT_rich Low_complexity Low_complexity 1 67 0 1557 147 4 12 chr2 104320888 104321146 -148935437 + AluSx SINE Alu 47 302 -10 257 75 25 0 chr2 104321285 104321325 -148935258 + (CA)n Simple_repeat Simple_repeat 2 42 0 1583 238 18 91 chr2 104322096 104322756 -148933827 + LTR9 LTR ERV1 1 612 0 1483 140 25 80 chr2 104322979 104323293 -148933290 - AluJo SINE Alu -15 297 1 491 186 101 0 chr2 104323969 104324098 -148932485 + MER5C DNA MER1_type 138 279 -45 278 333 154 8 chr2 104325041 104325158 -148931425 + L2 LINE L2 3136 3269 -3 264 333 67 0 chr2 104325960 104326080 -148930503 - MIR SINE MIR -125 137 10 880 188 6 0 chr2 104326585 104326781 -148929802 - AluJb SINE Alu 0 312 132 2597 124 3 3 chr2 104327999 104328363 -148928220 + THE1B LTR MaLR 1 364 0 7333 108 14 38 chr2 104328363 104329466 -148927117 + THE1B-int LTR MaLR 1 1076 -504 1109 235 28 150 chr2 104329466 104330218 -148926365 - PABL_B LTR ERV1 0 667 1 3609 87 46 0 chr2 104330221 104330703 -148925880 + THE1B-int LTR MaLR 1077 1580 0 2249 96 3 0 chr2 104330703 104330995 -148925588 + THE1B LTR MaLR 1 293 -71 698 113 10 0 chr2 104331095 104331192 -148925391 - AluS SINE Alu -214 99 2 33 25 0 0 chr2 104331196 104331236 -148925347 + AT_rich Low_complexity Low_complexity 1 40 0 275 291 122 20 chr2 104335037 104335185 -148921398 - MIR SINE MIR -16 246 84 252 282 13 13 chr2 104335556 104335634 -148920949 - MIR SINE MIR -22 240 163 1796 149 17 0 chr2 104335882 104336177 -148920406 - AluSx SINE Alu -12 300 1 646 141 0 0 chr2 104339484 104339576 -148917007 - AluJ/FLAM SINE Alu -220 92 1 2175 85 0 7 chr2 104339723 104340017 -148916566 - AluSq SINE Alu -21 292 1 196 340 87 16 chr2 104340196 104340381 -148916202 + MIR SINE MIR 13 210 -52 343 331 105 28 chr2 104341079 104341260 -148915323 + MIR3 SINE MIR 5 199 -9 854 273 14 7 chr2 104341722 104342004 -148914579 + L1ME1 LINE L1 4780 5063 -1083 789 244 14 5 chr2 104342024 104342233 -148914350 + L1ME1 LINE L1 5188 5398 -748 199 343 21 21 chr2 104342908 104343051 -148913532 - L3b LINE CR1 -339 1244 1102 237 162 0 0 chr2 104343054 104343091 -148913492 - 5S rRNA rRNA -46 75 39 280 260 110 0 chr2 104343456 104343556 -148913027 - MER5B DNA MER1_type -63 115 5 227 234 52 39 chr2 104346212 104346289 -148910294 - L3 LINE CR1 -80 1497 1420 553 151 50 34 chr2 104346374 104346493 -148910090 + MER53 DNA DNA 1 121 -68 602 138 99 94 chr2 104346558 104346739 -148909844 + MER53 DNA DNA 6 187 -2 448 259 76 13 chr2 104346859 104347017 -148909566 + MIR SINE MIR 39 206 -56 720 207 87 54 chr2 104347230 104347472 -148909111 + L1MB8 LINE L1 5929 6178 0 772 309 71 86 chr2 104347661 104347942 -148908641 + L1M4 LINE L1 2910 3194 -2952 2130 112 0 0 chr2 104347942 104348236 -148908347 + AluSx SINE Alu 2 295 -17 772 309 71 86 chr2 104348236 104348673 -148907910 + L1M4 LINE L1 3194 3617 -2529 1755 42 5 0 chr2 104348804 104349016 -148907567 + L1PA5 LINE L1 5939 6151 -3 2201 123 0 0 chr2 104349349 104349659 -148906924 - AluSx SINE Alu -2 310 1 2119 109 3 3 chr2 104352153 104352457 -148904126 + AluSc SINE Alu 1 304 -5 1974 101 0 36 chr2 104352638 104352914 -148903669 - AluSq SINE Alu -47 266 1 180 0 0 0 chr2 104353713 104353733 -148902850 + (CCA)n Simple_repeat Simple_repeat 1 20 0 2263 86 0 27 chr2 104354584 104354885 -148901698 - AluSx SINE Alu -19 293 1 1781 224 80 31 chr2 104355077 104355302 -148901281 + L1ME1 LINE L1 5584 5797 -369 2287 123 3 0 chr2 104355302 104355612 -148900971 - AluSx SINE Alu -1 311 1 1781 224 80 31 chr2 104355612 104355926 -148900657 + L1ME1 LINE L1 5797 6149 -17 2628 168 72 14 chr2 104357054 104357625 -148898958 - Cheshire DNA MER1_type 0 2420 1817 353 221 21 53 chr2 104357717 104357812 -148898771 - Cheshire DNA MER1_type -601 1819 1728 771 330 53 10 chr2 104357944 104358435 -148898148 - L1M4 LINE L1 -2040 4106 3595 282 83 0 0 chr2 104358979 104359015 -148897568 - U2 snRNA snRNA -152 36 1 2136 141 0 0 chr2 104359553 104359858 -148896725 + AluSx SINE Alu 1 305 -7 2044 255 67 44 chr2 104359946 104360735 -148895848 - L1ME3 LINE L1 -4 6227 5421 2139 250 219 30 chr2 104360931 104362162 -148894421 - L1ME3 LINE L1 -1022 5193 3730 1580 264 108 80 chr2 104362136 104362379 -148894204 - L1ME3 LINE L1 -2974 3241 3006 * 2472 78 3 0 chr2 104362379 104362688 -148893895 + AluY SINE Alu 1 310 -1 1580 264 108 80 chr2 104362688 104364707 -148891876 - L1ME3 LINE L1 -3209 3006 954 506 198 111 16 chr2 104364725 104364851 -148891732 - MLT1I LTR MaLR -271 138 1 187 253 0 157 chr2 104364856 104364888 -148891695 - MIR SINE MIR -168 94 59 1756 149 10 26 chr2 104364888 104365190 -148891393 + AluSx SINE Alu 4 300 -12 2179 101 28 0 chr2 104365190 104365477 -148891106 + AluSc SINE Alu 1 295 -14 187 253 0 157 chr2 104365477 104365526 -148891057 - MIR SINE MIR -201 61 25 1780 253 81 41 chr2 104365681 104366322 -148890261 - L1ME3A LINE L1 -5 6165 5499 1109 180 90 11 chr2 104366323 104366601 -148889982 + Charlie5 DNA MER1_type 2325 2624 0 533 148 0 11 chr2 104367697 104367785 -148888798 + MSTA LTR MaLR 342 428 0 459 311 72 6 chr2 104369008 104369175 -148887408 - L2 LINE L2 -461 2853 2676 2398 287 57 51 chr2 104369277 104370181 -148886402 - L1MEc LINE L1 -4734 1662 745 1685 167 3 25 chr2 104370181 104370463 -148886120 + AluJb SINE Alu 1 276 -36 2398 287 57 51 chr2 104370463 104371002 -148885581 - L1MEc LINE L1 -5651 745 211 197 275 25 75 chr2 104371380 104371460 -148885123 + MIR SINE MIR 122 197 -65 2192 134 0 0 chr2 104371463 104371770 -148884813 + AluSq SINE Alu 1 307 -6 2485 115 126 5 chr2 104372062 104372444 -148884139 + MSTA LTR MaLR 1 428 0 245 314 12 0 chr2 104372967 104373053 -148883530 + MER5A DNA MER1_type 20 106 -83 1966 164 3 0 chr2 104373792 104374103 -148882480 + AluSx SINE Alu 1 312 0 21 0 0 0 chr2 104375202 104375223 -148881360 + AT_rich Low_complexity Low_complexity 1 21 0 2146 125 0 0 chr2 104375226 104375563 -148881020 + AluSx SINE Alu 1 337 0 245 217 14 14 chr2 104375862 104375931 -148880652 + MER117 DNA MER1_type 51 119 -78 348 322 17 42 chr2 104375997 104376115 -148880468 + MIR3 SINE MIR 69 183 -25 2028 125 0 35 chr2 104376527 104376846 -148879737 + AluSx SINE Alu 1 308 -4 24 0 0 0 chr2 104377440 104377464 -148879119 + AT_rich Low_complexity Low_complexity 1 24 0 1953 130 0 71 chr2 104377562 104377884 -148878699 + AluSq SINE Alu 1 299 -14 1202 262 24 82 chr2 104377997 104378451 -148878132 + L1MDb LINE L1 10 437 -5972 2448 111 36 28 chr2 104378487 104378848 -148877735 + THE1B LTR MaLR 1 364 0 1778 212 117 51 chr2 104378853 104379606 -148876977 + L1MDb LINE L1 759 1552 -4854 1742 182 191 2 chr2 104379606 104380030 -148876553 - MLT1D LTR MaLR 0 505 2 1778 212 117 51 chr2 104380030 104380082 -148876501 + L1MDb LINE L1 1552 1599 -4807 2071 93 7 65 chr2 104380088 104380398 -148876185 + AluSx SINE Alu 1 292 -20 2175 113 0 31 chr2 104380401 104380720 -148875863 + AluSc SINE Alu 1 309 0 300 267 131 37 chr2 104380962 104381153 -148875430 - L2 LINE L2 -27 3286 3078 215 245 17 100 chr2 104381144 104381292 -148875291 - L2 LINE L2 -338 2976 2836 * 180 0 0 0 chr2 104381398 104381418 -148875165 + (CA)n Simple_repeat Simple_repeat 1 20 0 1745 134 45 84 chr2 104382779 104383137 -148873446 - MER7A DNA MER2_type 0 346 4 237 33 0 0 chr2 104383724 104383754 -148872829 + (CAA)n Simple_repeat Simple_repeat 2 31 0 225 0 0 0 chr2 104385397 104385422 -148871161 + (CA)n Simple_repeat Simple_repeat 2 26 0 323 272 132 48 chr2 104385716 104385862 -148870721 + MIR SINE MIR 2 175 -87 2231 87 10 10 chr2 104385862 104386161 -148870422 + AluSp SINE Alu 1 299 -14 323 272 132 48 chr2 104386161 104386242 -148870341 + MIR SINE MIR 175 248 -14 2325 88 0 0 chr2 104386438 104386722 -148869861 - AluSx SINE Alu -16 296 13 1881 220 54 24 chr2 104386761 104387454 -148869129 + Charlie1a DNA MER1_type 2 764 -691 2727 244 53 33 chr2 104387476 104387512 -148869071 + MER21B LTR ERV1 12 46 -817 2441 109 61 17 chr2 104387512 104387871 -148868712 + THE1C LTR MaLR 1 375 0 2727 244 53 33 chr2 104387871 104388587 -148867996 + MER21B LTR ERV1 46 779 -84 2240 173 97 11 chr2 104388598 104389123 -148867460 + Charlie1a DNA MER1_type 886 1455 0 802 190 15 0 chr2 104390205 104390342 -148866241 - AluJo SINE Alu -172 140 2 347 314 48 26 chr2 104390533 104390822 -148865761 + MLT1J2 LTR MaLR 99 395 -14 251 274 27 0 chr2 104390887 104390960 -148865623 + MER116 DNA Mariner 5 79 -1 1139 213 23 33 chr2 104391041 104391346 -148865237 + L1MB7 LINE L1 2621 2922 -3224 1327 108 9 37 chr2 104391347 104391561 -148865022 - THE1B LTR MaLR -1 363 156 273 228 0 0 chr2 104392101 104392180 -148864403 + A-rich Low_complexity Low_complexity 1 79 0 1125 78 98 0 chr2 104395317 104395470 -148861113 - THE1B LTR MaLR -196 168 1 8260 221 67 21 chr2 104395470 104396136 -148860447 + L1MB7 LINE L1 2918 3552 -2594 2118 160 36 33 chr2 104396136 104396499 -148860084 - THE1B LTR MaLR 0 364 1 8260 221 67 21 chr2 104396499 104398050 -148858533 + L1MB7 LINE L1 3552 5244 -902 2595 156 21 32 chr2 104398050 104398481 -148858102 - MSTB LTR MaLR 0 426 1 8260 221 67 21 chr2 104398481 104398537 -148858046 + L1MB7 LINE L1 5244 5296 -850 1419 203 57 3 chr2 104398637 104398938 -148857645 + L1MB7 LINE L1 5867 6183 -1 1884 137 3 18 chr2 104398948 104399232 -148857351 + AluSg SINE Alu 1 280 -30 513 0 0 0 chr2 104399232 104399289 -148857294 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 1548 194 78 4 chr2 104399326 104399708 -148856875 + MLT2B2 LTR ERVL 1 454 -61 240 174 22 0 chr2 104399813 104399859 -148856724 + MLT2B2 LTR ERVL 466 512 -8 271 316 51 0 chr2 104399959 104400076 -148856507 + MIR3 SINE MIR 81 203 -5 284 319 94 7 chr2 104400751 104400889 -148855694 - MER5B DNA MER1_type -28 150 1 488 309 29 61 chr2 104401147 104401393 -148855190 - HsTC2 DNA Tc2 -1020 878 641 1865 146 4 7 chr2 104401636 104401916 -148854667 + AluJb SINE Alu 19 297 -15 234 318 16 0 chr2 104402194 104402257 -148854326 - L2 LINE L2 -4 3309 3246 493 260 19 19 chr2 104402313 104402467 -148854116 - MER112 DNA MER1_type -6 254 101 1912 156 7 0 chr2 104402467 104402755 -148853828 + AluJb SINE Alu 1 290 -22 229 206 111 0 chr2 104402820 104402883 -148853700 - MER112 DNA MER1_type -190 70 1 1340 246 80 13 chr2 104402929 104403439 -148853144 + L1M4 LINE L1 3672 4238 -1908 247 125 0 0 chr2 104403448 104403488 -148853095 - MIR SINE MIR -57 205 166 1281 258 89 18 chr2 104403498 104403700 -148852883 - L1M4 LINE L1 -2551 3595 3409 2508 111 11 6 chr2 104403700 104404053 -148852530 + THE1A LTR MaLR 1 355 0 1281 258 89 18 chr2 104404053 104404448 -148852135 - L1M4 LINE L1 -2737 3409 2956 1621 168 7 7 chr2 104404735 104405020 -148851563 + AluJb SINE Alu 1 285 -27 396 55 0 0 chr2 104405022 104405077 -148851506 + (TG)n Simple_repeat Simple_repeat 2 56 0 2078 133 13 37 chr2 104405096 104405471 -148851112 + MER4E LTR ERV1 2 367 -399 2372 66 3 0 chr2 104405472 104405774 -148850809 + AluY SINE Alu 1 303 -8 763 252 149 27 chr2 104405789 104406310 -148850273 - MLT2F LTR ERVL 0 663 1 577 56 0 0 chr2 104406982 104407053 -148849530 - THE1C LTR MaLR -183 192 122 353 311 102 57 chr2 104407154 104407437 -148849146 + L2 LINE L2 2962 3257 -15 4693 219 50 66 chr2 104407442 104407587 -148848996 - L1M LINE L1 -756 5390 5244 1958 131 70 28 chr2 104407587 104407945 -148848638 + THE1C LTR MaLR 1 373 -2 4693 219 50 66 chr2 104407945 104408312 -148848271 - L1M LINE L1 -902 5244 4873 4557 126 0 0 chr2 104408312 104408979 -148847604 + L1PA13 LINE L1 5497 6163 0 4693 219 50 66 chr2 104408979 104409582 -148847001 - L1M LINE L1 -1273 4873 4362 1613 100 93 70 chr2 104409582 104409882 -148846701 - AluSp SINE Alu -6 307 1 4693 219 50 66 chr2 104409882 104410433 -148846150 - L1M LINE L1 -1784 4362 3804 1813 162 16 0 chr2 104410471 104410774 -148845809 + AluSx SINE Alu 1 308 -4 499 273 156 0 chr2 104410774 104410902 -148845681 - L1MDa LINE L1 -6271 269 122 440 339 40 6 chr2 104412113 104412290 -148844293 - MER5A DNA MER1_type 0 189 7 23 0 0 0 chr2 104413536 104413559 -148843024 + AT_rich Low_complexity Low_complexity 1 23 0 1642 147 8 4 chr2 104414130 104414396 -148842187 - AluSc SINE Alu -40 269 3 989 156 13 56 chr2 104415094 104415325 -148841258 + AluSq SINE Alu 1 221 -92 268 195 37 24 chr2 104415773 104415855 -148840728 + GA-rich Low_complexity Low_complexity 4 86 0 490 73 0 37 chr2 104415856 104415938 -148840645 + (GAAA)n Simple_repeat Simple_repeat 1 79 0 2078 91 49 0 chr2 104416230 104416516 -148840067 - AluSq SINE Alu -13 300 1 346 193 114 53 chr2 104416829 104416943 -148839640 + MIR SINE MIR 17 137 -71 774 168 0 0 chr2 104418260 104418385 -148838198 + FRAM SINE Alu 31 155 -21 2294 87 3 0 chr2 104419315 104419615 -148836968 - AluSp SINE Alu -7 306 6 1822 162 0 10 chr2 104419849 104420151 -148836432 - AluSx SINE Alu -13 299 1 554 156 37 9 chr2 104420160 104420269 -148836314 - MER8 DNA MER2_type -127 112 1 189 0 0 0 chr2 104420303 104420324 -148836259 + (TTTTTA)n Simple_repeat Simple_repeat 2 22 0 1249 268 88 0 chr2 104420399 104420728 -148835855 - MER119 DNA MER1_type -225 358 1 2318 57 0 3 chr2 104420788 104421086 -148835497 + AluY SINE Alu 14 310 -1 24 53 0 0 chr2 104421457 104421495 -148835088 + GC_rich Low_complexity Low_complexity 1 38 0 606 207 154 21 chr2 104421793 104421981 -148834602 + MER20B DNA MER1_type 305 517 -266 1798 104 8 4 chr2 104422160 104422411 -148834172 - AluSg SINE Alu -15 295 44 762 94 0 0 chr2 104422411 104422507 -148834076 - AluSg SINE Alu -212 98 3 354 226 68 23 chr2 104422508 104422641 -148833942 + MER20B DNA MER1_type 643 781 -2 378 0 0 0 chr2 104422899 104422941 -148833642 + (TTTA)n Simple_repeat Simple_repeat 1 42 0 1925 70 50 0 chr2 104422941 104423199 -148833384 - L1PB1 LINE L1 -7 6144 5874 2151 67 0 0 chr2 104423219 104423488 -148833095 + AluY SINE Alu 28 296 -15 234 0 0 0 chr2 104423488 104423514 -148833069 + (TA)n Simple_repeat Simple_repeat 2 27 0 723 151 17 0 chr2 104423910 104424029 -148832554 + AluY SINE Alu 180 300 -11 299 250 10 48 chr2 104424431 104424530 -148832053 - HsTC2 DNA Tc2 -122 1776 1682 4569 122 50 67 chr2 104424530 104424815 -148831768 - Tigger1 DNA MER2_type 0 2418 2130 1585 167 3 28 chr2 104424815 104425102 -148831481 - AluSx SINE Alu -32 280 1 4569 122 50 67 chr2 104425102 104425696 -148830887 - Tigger1 DNA MER2_type -288 2130 1554 2001 128 0 0 chr2 104425697 104425979 -148830604 + AluSx SINE Alu 1 282 -30 261 0 0 0 chr2 104425980 104426009 -148830574 + (TA)n Simple_repeat Simple_repeat 2 30 0 212 222 12 58 chr2 104426116 104426287 -148830296 + C-rich Low_complexity Low_complexity 4 166 0 * 319 205 51 32 chr2 104426215 104426371 -148830212 + (CCCG)n Simple_repeat Simple_repeat 4 162 0 1751 88 0 17 chr2 104426577 104426815 -148829768 - AluSq SINE Alu -79 234 1 664 79 0 0 chr2 104427139 104427228 -148829355 - AluY SINE Alu -7 304 216 2082 105 33 10 chr2 104427366 104427670 -148828913 - AluSx SINE Alu -1 311 1 330 305 43 21 chr2 104427695 104427836 -148828747 - MIR SINE MIR -70 192 49 410 78 0 0 chr2 104428204 104428255 -148828328 + Alu SINE Alu 3 53 -259 1599 106 8 13 chr2 104428311 104428599 -148827984 + AluSq SINE Alu 65 313 0 672 218 26 0 chr2 104429233 104429389 -148827194 + MSTA LTR MaLR 1 160 -268 2187 73 13 7 chr2 104429581 104429881 -148826702 - AluY SINE Alu -9 302 1 2206 103 0 6 chr2 104429898 104430209 -148826374 - AluSg SINE Alu -1 309 1 1946 153 0 10 chr2 104430293 104430607 -148825976 + AluJb SINE Alu 1 311 -1 396 329 37 12 chr2 104431227 104431388 -148825195 - L2 LINE L2 -3 3310 3146 780 236 98 82 chr2 104431392 104431841 -148824742 - MLT1H LTR MaLR 0 549 94 1827 103 14 38 chr2 104432241 104432574 -148824009 - AluSq SINE Alu 0 326 1 1700 174 3 3 chr2 104432588 104432875 -148823708 - AluJo SINE Alu -25 287 1 528 262 16 43 chr2 104433087 104433392 -148823191 - AluSg SINE Alu -3 297 1 252 0 0 0 chr2 104433976 104434004 -148822579 + (TA)n Simple_repeat Simple_repeat 2 29 0 381 43 0 0 chr2 104434004 104434051 -148822532 + (CA)n Simple_repeat Simple_repeat 2 48 0 9765 128 19 18 chr2 104434072 104434793 -148821790 - Tigger1 DNA MER2_type -848 1570 851 1974 107 11 4 chr2 104434793 104435104 -148821479 - AluSq SINE Alu 0 313 1 9765 128 19 18 chr2 104435104 104435920 -148820663 - Tigger1 DNA MER2_type -1567 851 31 281 207 92 11 chr2 104435935 104436022 -148820561 - HsTC2 DNA Tc2 -224 1674 1581 * 358 100 0 0 chr2 104435995 104436045 -148820538 - HsTC2 DNA Tc2 -598 1300 1251 2280 92 3 0 chr2 104436057 104436360 -148820223 - AluSc SINE Alu -5 304 1 277 183 231 19 chr2 104436362 104436466 -148820117 - HsTC2 DNA Tc2 -1770 128 3 25 51 0 0 chr2 104436633 104436672 -148819911 + AT_rich Low_complexity Low_complexity 1 39 0 189 147 0 0 chr2 104436916 104436950 -148819633 + (CA)n Simple_repeat Simple_repeat 2 35 0 423 0 0 0 chr2 104437518 104437565 -148819018 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 180 0 0 0 chr2 104437567 104437587 -148818996 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1857 160 0 0 chr2 104437592 104437879 -148818704 - AluSx SINE Alu -25 287 1 614 165 0 87 chr2 104437890 104437921 -148818662 + MER8 DNA MER2_type 124 156 -83 2209 78 0 3 chr2 104437921 104438241 -148818342 - AluY SINE Alu 0 319 1 614 165 0 87 chr2 104438241 104438335 -148818248 + MER8 DNA MER2_type 156 239 0 369 151 164 14 chr2 104438335 104438407 -148818176 + MER119 DNA MER1_type 501 583 0 292 276 143 9 chr2 104438653 104438758 -148817825 + MIR SINE MIR 96 214 -48 239 154 0 19 chr2 104440016 104440068 -148816515 + GA-rich Low_complexity Low_complexity 3 53 0 2414 53 3 0 chr2 104440171 104440470 -148816113 - AluY SINE Alu -11 300 1 1666 172 3 7 chr2 104440520 104440860 -148815723 + AluJb SINE Alu 1 339 0 2067 95 7 7 chr2 104440869 104441165 -148815418 + AluY SINE Alu 1 296 -15 279 0 0 0 chr2 104441337 104441368 -148815215 + (TA)n Simple_repeat Simple_repeat 1 31 0 251 250 0 0 chr2 104441368 104441432 -148815151 - L1MC4 LINE L1 -1339 6703 6640 436 195 71 0 chr2 104441463 104441576 -148815007 - L1M4 LINE L1 -875 5271 5151 1895 138 11 0 chr2 104441584 104441867 -148814716 - AluSx SINE Alu -26 286 1 290 128 0 0 chr2 104441907 104441946 -148814637 - 5S rRNA rRNA -82 39 1 968 203 0 14 chr2 104441946 104442153 -148814430 - L1M4 LINE L1 -1005 5141 4938 1411 85 0 5 chr2 104442154 104442342 -148814241 - AluSg SINE Alu -123 187 1 4466 161 48 33 chr2 104442349 104442749 -148813834 + L1MB7 LINE L1 5274 5667 -517 2230 88 3 0 chr2 104442749 104443046 -148813537 - AluSx SINE Alu -14 298 1 4466 161 48 33 chr2 104443046 104443542 -148813041 + L1MB7 LINE L1 5667 6183 -1 2161 144 80 3 chr2 104443650 104444018 -148812565 - MSTA LTR MaLR 0 428 39 315 203 56 15 chr2 104444003 104444093 -148812490 - LTR50 LTR ERVL -133 635 299 * 4382 185 29 32 chr2 104444563 104444851 -148811732 - L1MC3 LINE L1 -932 6853 6566 2120 104 3 3 chr2 104444851 104445148 -148811435 + AluSx SINE Alu 1 297 -15 4382 185 29 32 chr2 104445148 104445790 -148810793 - L1MC3 LINE L1 -1219 6566 5926 2500 120 55 43 chr2 104445790 104446090 -148810493 - MSTB1 LTR MaLR 0 432 124 2786 116 14 36 chr2 104446090 104446528 -148810055 - MSTA LTR MaLR 0 428 1 2500 120 55 43 chr2 104446528 104446644 -148809939 - MSTB1 LTR MaLR -308 124 11 1398 167 69 0 chr2 104446648 104446924 -148809659 - L1MC3 LINE L1 -1886 5899 5605 314 279 79 29 chr2 104446926 104447066 -148809517 - L1MEc LINE L1 -3979 2405 2259 2091 102 3 7 chr2 104447401 104447695 -148808888 - AluSq SINE Alu -19 294 2 309 289 127 50 chr2 104447701 104448120 -148808463 - L1MEc LINE L1 -4677 1886 1436 2092 95 17 10 chr2 104448197 104448492 -148808091 - AluSx SINE Alu -15 297 1 298 318 62 52 chr2 104448673 104448978 -148807605 - L1MEc LINE L1 -5250 1122 815 726 170 14 7 chr2 104449208 104449355 -148807228 - AluY SINE Alu -162 149 2 474 284 68 68 chr2 104450223 104450544 -148806039 + LTR16C LTR ERVL 79 404 -87 1743 158 0 11 chr2 104450544 104450858 -148805725 - AluSx SINE Alu 0 311 1 474 284 68 68 chr2 104450858 104450946 -148805637 + LTR16C LTR ERVL 403 490 -1 2008 144 0 0 chr2 104451029 104451334 -148805249 - AluSx SINE Alu -6 306 2 4223 178 51 61 chr2 104451371 104451937 -148804646 - L1MC3 LINE L1 -2 7783 7213 1840 144 7 0 chr2 104451937 104452236 -148804347 + AluSx SINE Alu 1 301 -11 4223 178 51 61 chr2 104452236 104452382 -148804201 - L1MC3 LINE L1 -572 7213 7067 198 0 0 0 chr2 104452382 104452404 -148804179 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 4223 178 51 61 chr2 104452404 104452423 -148804160 - L1MC3 LINE L1 -718 7067 7049 225 0 0 0 chr2 104452423 104452448 -148804135 + (TG)n Simple_repeat Simple_repeat 2 26 0 4223 178 51 61 chr2 104452448 104452462 -148804121 - L1MC3 LINE L1 -736 7049 7036 218 54 0 27 chr2 104452462 104452499 -148804084 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1966 106 7 0 chr2 104452503 104452778 -148803805 - AluSq SINE Alu -35 278 2 4223 178 51 61 chr2 104452778 104453079 -148803504 - L1MC3 LINE L1 -752 7033 6739 1498 126 160 19 chr2 104454542 104454804 -148801779 + AluSg SINE Alu 1 299 -1 512 292 64 56 chr2 104454860 104454871 -148801712 + HAL1b LINE L1 1055 1064 -284 613 182 45 38 chr2 104454871 104455003 -148801580 - FLAM_A SINE Alu 0 133 1 512 292 64 56 chr2 104455003 104455258 -148801325 + HAL1b LINE L1 1064 1323 -25 232 350 124 0 chr2 104455873 104455970 -148800613 - MIR SINE MIR -62 146 38 213 328 131 8 chr2 104456129 104456251 -148800332 + MIR SINE MIR 28 164 -98 1996 135 3 25 chr2 104457019 104457338 -148799245 + AluSx SINE Alu 1 312 0 628 290 100 10 chr2 104457405 104457695 -148798888 - MLT1G LTR MaLR -229 361 46 282 258 0 31 chr2 104458658 104458755 -148797828 - L1ME4a LINE L1 -72 6049 5956 228 204 19 0 chr2 104459008 104459062 -148797521 - LTR66 LTR ERVL -171 439 385 1937 100 14 28 chr2 104459173 104459337 -148797246 - AluSx SINE Alu -16 296 136 2586 77 0 0 chr2 104459337 104459648 -148796935 - AluY SINE Alu 0 311 1 1937 100 14 28 chr2 104459648 104459773 -148796810 - AluSx SINE Alu -176 136 11 2127 122 10 0 chr2 104459941 104460236 -148796347 - AluSx SINE Alu -12 300 3 319 350 91 16 chr2 104461374 104461560 -148795023 - MIR SINE MIR -14 248 49 2172 114 7 0 chr2 104461902 104462231 -148794352 + AluSq SINE Alu 1 331 0 403 291 169 10 chr2 104462795 104463097 -148793486 + L2 LINE L2 2921 3270 -2 2363 90 3 22 chr2 104463151 104463463 -148793120 + AluSq SINE Alu 1 306 -7 592 179 9 0 chr2 104463520 104463632 -148792951 - MER41B LTR ERV1 -521 114 2 534 212 60 40 chr2 104463984 104464135 -148792448 - MER5B DNA MER1_type -20 158 5 387 173 0 53 chr2 104464397 104464472 -148792111 + L2 LINE L2 3220 3290 -23 1978 75 49 8 chr2 104464543 104464830 -148791753 - AluSx SINE Alu 0 301 4 28 48 0 0 chr2 104465794 104465836 -148790747 + AT_rich Low_complexity Low_complexity 1 42 0 1362 136 183 4 chr2 104466086 104466337 -148790246 - AluJb SINE Alu -6 296 1 184 107 0 0 chr2 104466415 104466443 -148790140 + L2 LINE L2 3041 3068 -245 2313 78 0 0 chr2 104466456 104466766 -148789817 - AluY SINE Alu 0 310 1 892 145 50 25 chr2 104467386 104467545 -148789038 - AluSx SINE Alu -147 165 3 2474 63 0 3 chr2 104467549 104467848 -148788735 - AluY SINE Alu -13 298 1 221 303 107 39 chr2 104467989 104468167 -148788416 + L2 LINE L2 3120 3309 -4 2415 77 0 0 chr2 104468177 104468476 -148788107 - AluY SINE Alu -11 300 2 195 167 104 0 chr2 104468478 104468526 -148788057 - L3 LINE CR1 -913 664 612 239 353 36 14 chr2 104468973 104469112 -148787471 + MIR3 SINE MIR 39 180 -28 418 250 46 40 chr2 104469351 104469489 -148787094 + MER5A DNA MER1_type 26 189 0 476 290 249 4 chr2 104469561 104469830 -148786753 - L2 LINE L2 -8 3305 2971 319 239 30 0 chr2 104470024 104470091 -148786492 - L2 LINE L2 -526 2788 2720 2207 111 27 0 chr2 104470091 104470389 -148786194 - AluSx SINE Alu -6 306 1 840 269 36 5 chr2 104470392 104470615 -148785968 - L2 LINE L2 -966 2348 2119 554 98 98 22 chr2 104470636 104470728 -148785855 + AluSq/x SINE Alu 5 103 -209 596 124 11 11 chr2 104470828 104470917 -148785666 - AluSg SINE Alu -220 90 2 2049 113 41 3 chr2 104470962 104471254 -148785329 + AluSx SINE Alu 1 303 -9 663 263 118 18 chr2 104472499 104472727 -148783856 + MER69 DNA AcHobo 256 506 -720 237 190 103 0 chr2 104472742 104472800 -148783783 + MER69 DNA AcHobo 2413 2476 -50 2698 139 24 5 chr2 104472803 104473227 -148783356 - MSTB1 LTR MaLR 0 432 1 350 307 71 62 chr2 104473270 104473422 -148783161 - L1MC4a LINE L1 -1694 6114 5958 2272 114 0 3 chr2 104473422 104473729 -148782854 - AluSx SINE Alu -6 306 1 350 307 71 62 chr2 104473729 104473801 -148782782 - L1MC4a LINE L1 -1850 5958 5888 333 310 158 36 chr2 104473933 104474678 -148781905 - L1MC4a LINE L1 -1158 4988 4153 2616 71 0 0 chr2 104474812 104475123 -148781460 + AluY SINE Alu 1 311 0 1569 141 130 45 chr2 104475123 104475499 -148781084 - LOR1b LTR ERV1 -53 408 1 279 105 0 0 chr2 104475566 104475604 -148780979 + AluSg SINE Alu 1 38 -261 1743 114 76 0 chr2 104475605 104475868 -148780715 + AluSg SINE Alu 13 295 -15 683 188 8 12 chr2 104476453 104476719 -148779864 + CT-rich Low_complexity Low_complexity 1 264 0 2131 121 0 0 chr2 104476721 104477001 -148779582 - AluSx SINE Alu -32 280 1 337 339 42 0 chr2 104477001 104477119 -148779464 + L2 LINE L2 2613 2735 -579 640 203 16 61 chr2 104477636 104477882 -148778701 + ORSL DNA AcHobo 13 247 -28 2068 117 0 28 chr2 104478753 104479036 -148777547 + AluSx SINE Alu 1 275 -37 204 40 0 0 chr2 104479039 104479064 -148777519 + (TC)n Simple_repeat Simple_repeat 2 26 0 336 48 0 0 chr2 104479066 104479108 -148777475 + (CA)n Simple_repeat Simple_repeat 1 42 0 2375 72 0 26 chr2 104480115 104480420 -148776163 - AluY SINE Alu -14 297 1 467 83 28 0 chr2 104480610 104480682 -148775901 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 1965 127 31 7 chr2 104480775 104481067 -148775516 - AluSq SINE Alu -14 299 1 5609 103 3 14 chr2 104481073 104481929 -148774654 - L1PB1 LINE L1 0 6151 5305 225 297 14 40 chr2 104482257 104482331 -148774252 - L2 LINE L2 0 3272 3201 261 0 0 0 chr2 104483655 104483684 -148772899 + (CA)n Simple_repeat Simple_repeat 1 29 0 432 0 0 0 chr2 104484235 104484283 -148772300 + (CA)n Simple_repeat Simple_repeat 1 48 0 2007 110 76 3 chr2 104485152 104485442 -148771141 - AluSq SINE Alu -2 311 1 2909 137 12 0 chr2 104485565 104485988 -148770595 + MSTA LTR MaLR 1 428 0 349 320 148 15 chr2 104486276 104486607 -148769976 - MLT1J1 LTR MaLR -1 445 71 1766 173 9 30 chr2 104486706 104486737 -148769846 - MLT1A1 LTR MaLR -37 328 298 2299 105 7 0 chr2 104486737 104487032 -148769551 + AluSq SINE Alu 1 297 -16 1766 173 9 30 chr2 104487032 104487335 -148769248 - MLT1A1 LTR MaLR -67 298 1 459 331 29 0 chr2 104487340 104487479 -148769104 - MIR SINE MIR -113 149 7 308 263 128 67 chr2 104488622 104488801 -148767782 + L1ME1 LINE L1 5704 5893 -273 318 132 0 0 chr2 104488822 104488875 -148767708 + (TG)n Simple_repeat Simple_repeat 2 54 0 212 229 83 0 chr2 104488907 104488955 -148767628 - L2 LINE L2 -52 3261 3210 1138 313 112 22 chr2 104488982 104489541 -148767042 - L2 LINE L2 -484 2830 2176 1466 140 38 0 chr2 104489541 104489776 -148766807 - L1PA16 LINE L1 -9 6157 5914 1138 313 112 22 chr2 104489776 104490018 -148766565 - L2 LINE L2 -1138 2176 1957 282 95 0 0 chr2 104490741 104490783 -148765800 + (CA)n Simple_repeat Simple_repeat 2 43 0 262 322 11 11 chr2 104491498 104491585 -148764998 - L3 LINE CR1 -10 1567 1481 407 135 0 14 chr2 104492760 104492834 -148763749 + (TTCC)n Simple_repeat Simple_repeat 4 76 0 1408 128 15 5 chr2 104492934 104493137 -148763446 + AluSq SINE Alu 96 300 -13 235 121 0 0 chr2 104493218 104493251 -148763332 - Alu SINE Alu -269 33 1 202 139 23 0 chr2 104493531 104493574 -148763009 + T-rich Low_complexity Low_complexity 3 46 0 1510 174 129 0 chr2 104493595 104493859 -148762724 + AluSx SINE Alu 1 298 -14 2391 75 0 14 chr2 104494311 104494604 -148761979 + AluY SINE Alu 1 289 -22 2235 121 3 0 chr2 104494957 104495262 -148761321 - AluSg SINE Alu -4 306 1 720 166 14 65 chr2 104495476 104495615 -148760968 + AluJ SINE Alu 2 133 -169 241 179 0 0 chr2 104495615 104495654 -148760929 + AluJ SINE Alu 128 166 -134 1010 66 16 0 chr2 104495654 104495775 -148760808 - AluSq SINE Alu -132 181 59 480 111 0 0 chr2 104495775 104495838 -148760745 - AluSg1 SINE Alu -214 95 33 420 158 248 40 chr2 104495835 104495936 -148760647 + AluJ SINE Alu 169 290 -22 * 2171 122 3 0 chr2 104496703 104496997 -148759586 - AluSx SINE Alu -17 295 1 2356 90 3 7 chr2 104497003 104497304 -148759279 - AluSp SINE Alu -13 300 1 30 0 0 0 chr2 104497307 104497337 -148759246 + AT_rich Low_complexity Low_complexity 1 30 0 2231 121 0 0 chr2 104497363 104497668 -148758915 - AluSg SINE Alu -5 305 1 2334 88 14 3 chr2 104497876 104498173 -148758410 + AluSq SINE Alu 1 300 -13 215 241 0 0 chr2 104498438 104498492 -148758091 + (TA)n Simple_repeat Simple_repeat 1 54 0 1984 133 7 23 chr2 104498492 104498793 -148757790 - AluSx SINE Alu -16 296 1 1623 156 65 6 chr2 104498934 104499273 -148757310 - L1MA9 LINE L1 0 6312 5954 1656 174 21 3 chr2 104499306 104499588 -148756995 + AluJo SINE Alu 3 289 -23 2454 58 7 0 chr2 104499627 104499919 -148756664 - AluY SINE Alu -17 294 1 1504 147 11 147 chr2 104500379 104500726 -148755857 - AluJo SINE Alu -2 300 1 2058 139 3 17 chr2 104501569 104501870 -148754713 - AluSx SINE Alu -15 297 1 271 236 157 0 chr2 104501953 104502042 -148754541 + U13 snRNA snRNA 2 104 0 827 162 0 22 chr2 104502322 104502458 -148754125 - FLAM_C SINE Alu 0 133 1 465 222 104 0 chr2 104503177 104503321 -148753262 - AluSc SINE Alu -12 297 139 453 238 0 60 chr2 104503337 104503522 -148753061 + C-rich Low_complexity Low_complexity 4 177 0 1079 68 0 8 chr2 104503684 104503816 -148752767 - AluY SINE Alu -180 131 1 2162 115 20 0 chr2 104503912 104504207 -148752376 + AluSq SINE Alu 1 301 -12 260 257 265 62 chr2 104504431 104504816 -148751767 + MLT1J LTR MaLR 1 463 -48 352 322 79 40 chr2 104504993 104505170 -148751413 + L1MEd LINE L1 2 185 -5934 346 280 47 105 chr2 104505361 104505496 -148751087 + L1MEd LINE L1 435 549 -5570 2189 77 88 0 chr2 104505496 104505781 -148750802 + AluSq SINE Alu 1 310 -3 346 280 47 105 chr2 104505781 104505902 -148750681 + L1MEd LINE L1 549 676 -5443 2088 113 0 7 chr2 104505903 104506186 -148750397 + AluY SINE Alu 1 281 -30 1925 60 9 0 chr2 104506203 104506435 -148750148 + AluY SINE Alu 1 234 -77 2067 139 80 14 chr2 104506803 104507086 -148749497 + MSTA LTR MaLR 54 366 -62 2143 110 6 46 chr2 104507086 104507412 -148749171 - AluSq SINE Alu 0 313 1 2067 139 80 14 chr2 104507412 104507480 -148749103 + MSTA LTR MaLR 366 428 0 2546 142 108 85 chr2 104508927 104509095 -148747488 - MER4A LTR ERV1 -1 663 500 2034 127 0 3 chr2 104509095 104509386 -148747197 - AluSg SINE Alu -20 290 1 2546 142 108 85 chr2 104509386 104509865 -148746718 - MER4A LTR ERV1 -164 500 1 2173 129 10 0 chr2 104510498 104510808 -148745775 - AluSq SINE Alu 0 313 1 2391 120 37 0 chr2 104511910 104512286 -148744297 + MLT1B LTR MaLR 1 390 0 811 183 0 0 chr2 104513040 104513171 -148743412 - AluJb SINE Alu -48 264 134 2282 106 0 0 chr2 104513453 104513755 -148742828 - AluY SINE Alu -9 302 1 2277 110 15 54 chr2 104513822 104514051 -148742532 - THE1C LTR MaLR 0 375 166 2357 50 0 72 chr2 104514051 104514371 -148742212 + AluY SINE Alu 12 308 -3 2277 110 15 54 chr2 104514371 104514531 -148742052 - THE1C LTR MaLR -209 166 1 207 200 0 0 chr2 104515223 104515258 -148741325 + (TATATG)n Simple_repeat Simple_repeat 2 36 0 553 26 0 26 chr2 104515392 104515469 -148741114 + (TTTCC)n Simple_repeat Simple_repeat 3 77 0 2114 129 0 0 chr2 104515469 104515755 -148740828 - AluSx SINE Alu -26 286 1 417 248 0 0 chr2 104515755 104515864 -148740719 - L1M4 LINE L1 -834 5312 5204 2024 113 15 0 chr2 104515890 104516195 -148740388 + AluSx SINE Alu 15 323 0 330 210 16 89 chr2 104516504 104516628 -148739955 - MER20B DNA MER1_type -634 149 35 2162 291 115 21 chr2 104516628 104517000 -148739583 + L2 LINE L2 1171 1507 -1807 1820 55 0 50 chr2 104517000 104517238 -148739345 - AluY SINE Alu -12 299 74 2246 102 3 3 chr2 104517238 104517530 -148739053 - AluSc SINE Alu -16 293 1 2162 291 115 21 chr2 104517530 104518084 -148738499 + L2 LINE L2 1507 2008 -1306 1488 53 10 67 chr2 104518084 104518293 -148738290 - MER107 DNA MER1_type 0 197 1 2162 291 115 21 chr2 104518293 104518590 -148737993 + L2 LINE L2 2008 2511 -803 2242 112 0 7 chr2 104518848 104519153 -148737430 - AluSx SINE Alu -9 303 1 2172 105 41 0 chr2 104520212 104520506 -148736077 + AluSx SINE Alu 1 306 -6 1654 153 96 3 chr2 104520575 104520857 -148735726 + AluJo SINE Alu 5 312 0 1669 132 30 1 chr2 104520859 104521251 -148735332 + LTR56 LTR ERV1 9 443 -2 234 303 109 0 chr2 104521511 104521630 -148734953 - MIR SINE MIR -60 202 71 2162 103 10 7 chr2 104521860 104522152 -148734431 + AluSx SINE Alu 1 293 -19 2095 197 88 33 chr2 104522639 104523161 -148733422 + LTR60 LTR ERV1 4 554 -32 238 258 23 62 chr2 104523142 104523270 -148733313 + MER41A LTR ERV1 392 514 -40 * 2702 126 13 58 chr2 104523455 104523613 -148732970 + LTR39 LTR ERV1 1 164 -619 2142 127 7 0 chr2 104523613 104523912 -148732671 + AluSx SINE Alu 1 301 -11 2702 126 13 58 chr2 104523912 104524204 -148732379 + LTR39 LTR ERV1 164 431 -352 853 87 9 0 chr2 104524241 104524356 -148732227 - FLAM_C SINE Alu -17 116 1 1247 139 5 28 chr2 104524356 104524567 -148732016 + LTR39 LTR ERV1 420 625 -158 3327 178 39 63 chr2 104524567 104524716 -148731867 + MER4E LTR ERV1 1 152 -627 4440 115 7 60 chr2 104524716 104525446 -148731137 + LTR8 LTR ERV1 1 691 0 3327 178 39 63 chr2 104525446 104525570 -148731013 + MER4E LTR ERV1 152 277 -502 2057 130 27 0 chr2 104525570 104525869 -148730714 - AluJb SINE Alu -1 311 5 3327 178 39 63 chr2 104525869 104526034 -148730549 + MER4E LTR ERV1 277 444 -335 2391 81 3 0 chr2 104526034 104526329 -148730254 - AluY SINE Alu -15 296 1 3327 178 39 63 chr2 104526329 104526686 -148729897 + MER4E LTR ERV1 444 779 0 862 231 0 0 chr2 104526686 104526841 -148729742 + LTR39 LTR ERV1 622 776 -7 42 20 0 0 chr2 104527564 104527613 -148728970 + AT_rich Low_complexity Low_complexity 1 49 0 1207 113 6 0 chr2 104527646 104527805 -148728778 - AluSg SINE Alu -150 160 1 3909 116 46 19 chr2 104528180 104528271 -148728312 + LTR9B LTR ERV1 1 88 -556 2105 108 3 3 chr2 104528271 104528566 -148728017 - AluSx SINE Alu -17 295 1 3909 116 46 19 chr2 104528566 104529101 -148727482 + LTR9B LTR ERV1 88 644 0 2133 125 3 0 chr2 104529119 104529422 -148727161 - AluSg SINE Alu -5 305 2 1215 102 13 0 chr2 104529502 104529659 -148726924 - AluSg/x SINE Alu -24 288 130 195 69 0 0 chr2 104529661 104529690 -148726893 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 2029 106 22 0 chr2 104529690 104529963 -148726620 - AluSg SINE Alu -31 279 1 311 213 0 16 chr2 104530155 104530216 -148726367 + AluJ/FLAM SINE Alu 1 60 -242 841 73 37 0 chr2 104530471 104530580 -148726003 + MER4E LTR ERV1 667 779 0 495 151 23 0 chr2 104530581 104530667 -148725916 + MER21A LTR ERV1 746 833 -98 538 161 0 0 chr2 104530669 104530756 -148725827 + MER4B LTR ERV1 1 87 -523 180 0 0 0 chr2 104530857 104530877 -148725706 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2035 157 44 18 chr2 104530884 104531272 -148725311 + MER65A LTR ERV1 41 438 -7 2745 258 70 7 chr2 104531341 104532027 -148724556 - MER21B LTR ERV1 -113 750 22 336 211 22 56 chr2 104532054 104532144 -148724439 - MER21B LTR ERV1 -776 87 1 1759 232 85 65 chr2 104532145 104532692 -148723891 + L1MDa LINE L1 1743 2277 -4263 2755 174 31 71 chr2 104532692 104533300 -148723283 - LTR9 LTR ERV1 -1 611 28 2336 112 0 0 chr2 104533300 104533603 -148722980 - AluSc SINE Alu -6 303 1 2755 174 31 71 chr2 104533603 104533630 -148722953 - LTR9 LTR ERV1 -584 28 1 1759 232 85 65 chr2 104533630 104533860 -148722723 + L1MDa LINE L1 2277 2541 -3999 2021 127 3 11 chr2 104533860 104534171 -148722412 + AluSx SINE Alu 1 309 0 1759 232 85 65 chr2 104534171 104534213 -148722370 + L1MDa LINE L1 2541 2581 -3959 5618 119 41 16 chr2 104534213 104535173 -148721410 - MER11C LTR ERVK 0 1071 1 8563 45 1 0 chr2 104535173 104536169 -148720414 - HERVK11 LTR ERVK 0 7953 6957 * 15912 61 15 1 chr2 104536154 104538144 -148718439 - HERVK11 LTR ERVK -1186 6767 4751 316 75 0 0 chr2 104538144 104538184 -148718399 - MER11A LTR ERVK -1226 40 1 827 142 0 0 chr2 104538257 104538384 -148718199 + AluSg/x SINE Alu 180 306 -6 1026 84 70 0 chr2 104538514 104538692 -148717891 - AluY SINE Alu 0 320 133 1972 129 0 55 chr2 104538699 104539009 -148717574 + AluSx SINE Alu 1 293 -19 470 209 80 42 chr2 104539045 104539308 -148717275 + L1MDa LINE L1 3475 3747 -2793 * 823 201 21 26 chr2 104539286 104539475 -148717108 + L1M4 LINE L1 1 188 -6354 488 204 274 26 chr2 104539475 104539725 -148716858 + LTR8A LTR ERV1 1 288 -435 3352 222 112 80 chr2 104539983 104541209 -148715374 + L1M4b LINE L1 -486 778 -5506 2081 129 75 6 chr2 104541213 104541546 -148715037 - LTR26 LTR ERV1 0 603 248 525 176 0 0 chr2 104542834 104542919 -148713664 - LTR26 LTR ERV1 -340 263 179 807 30 20 10 chr2 104542919 104543020 -148713563 - AluY SINE Alu -16 295 194 992 200 11 0 chr2 104543020 104543210 -148713373 - LTR26 LTR ERV1 -411 192 1 1119 190 36 12 chr2 104543213 104543466 -148713117 + L1M4b LINE L1 782 1040 -5244 183 80 0 0 chr2 104543483 104543508 -148713075 + (CA)n Simple_repeat Simple_repeat 2 26 0 286 221 176 0 chr2 104543508 104543576 -148713007 - Tigger5 DNA MER2_type -2 2321 2242 846 146 8 0 chr2 104543578 104543701 -148712882 + FLAM_C SINE Alu 2 125 -18 309 173 19 0 chr2 104543726 104543778 -148712805 - Tigger5 DNA MER2_type -2270 53 1 1385 235 42 17 chr2 104543783 104544227 -148712356 + L1M4b LINE L1 1053 1488 -4896 720 179 0 0 chr2 104544239 104544356 -148712227 + LTR26 LTR ERV1 147 263 -340 609 243 21 124 chr2 104544408 104544786 -148711797 + L1M4b LINE L1 1503 1841 -4543 211 345 129 32 chr2 104545905 104546183 -148710400 + L2 LINE L2 2968 3272 0 409 252 0 17 chr2 104547153 104547268 -148709315 - LTR33A LTR ERVL 0 523 411 2073 227 97 29 chr2 104547268 104547899 -148708684 + L1ME1 LINE L1 5470 6143 -23 472 170 53 11 chr2 104547903 104547997 -148708586 + MER4A LTR ERV1 1 98 -566 1473 152 33 82 chr2 104547997 104548360 -148708223 + MER4A LTR ERV1 261 664 0 11432 109 144 109 chr2 104548363 104549998 -148706585 + MER4A-int LTR ERV1 1 1578 -5020 2330 101 7 0 chr2 104549998 104550294 -148706289 + AluY SINE Alu 1 298 -13 11432 109 144 109 chr2 104550294 104552167 -148704416 + MER4A-int LTR ERV1 1578 3680 -2918 * 17669 91 47 19 chr2 104552166 104552824 -148703759 + MER4A-int LTR ERV1 3836 4474 -2124 3731 73 4 0 chr2 104552824 104553301 -148703282 - L1PA5 LINE L1 -6 6148 5670 17669 91 47 19 chr2 104553301 104555326 -148701257 + MER4A-int LTR ERV1 4474 6596 -2 633 101 10 20 chr2 104555334 104555433 -148701150 + MER4A LTR ERV1 1 98 -566 1664 143 11 77 chr2 104555433 104555803 -148700780 + MER4A LTR ERV1 261 664 0 485 129 0 0 chr2 104556706 104556776 -148699807 + MER34C LTR ERV1 1 70 -515 * 2917 156 79 18 chr2 104556748 104557177 -148699406 + MER34C LTR ERV1 7 477 -108 1454 174 38 123 chr2 104557177 104557574 -148699009 - MLT1A1 LTR MaLR -2 363 1 2917 156 79 18 chr2 104557574 104557690 -148698893 + MER34C LTR ERV1 477 585 0 2554 108 12 0 chr2 104558162 104558505 -148698078 - L1PA11 LINE L1 0 6174 5828 2525 65 0 0 chr2 104558675 104558969 -148697614 - AluY SINE Alu -17 294 1 934 214 47 45 chr2 104559130 104559582 -148697001 + MLT1H LTR MaLR 3 548 -1 682 68 11 0 chr2 104559885 104559973 -148696610 - THE1B LTR MaLR -81 283 195 2000 128 21 0 chr2 104560075 104560364 -148696219 + AluSg SINE Alu 1 295 -15 336 159 32 30 chr2 104560392 104560492 -148696091 - L1M4 LINE L1 -351 5823 5725 216 224 0 20 chr2 104560493 104560542 -148696041 + CT-rich Low_complexity Low_complexity 2 49 0 970 240 65 48 chr2 104560902 104561302 -148695281 - MER74B LTR ERVL -138 484 78 288 0 0 0 chr2 104561324 104561356 -148695227 + (TG)n Simple_repeat Simple_repeat 1 32 0 2272 91 3 26 chr2 104561417 104561724 -148694859 - AluSx SINE Alu -12 300 1 2863 173 33 8 chr2 104561726 104562235 -148694348 + Tigger7 DNA MER2_type 1 522 -1965 550 185 0 0 chr2 104562234 104562326 -148694257 + Tigger7 DNA MER2_type 2400 2491 0 * 545 313 96 56 chr2 104562459 104563128 -148693455 - L1M4 LINE L1 -1327 4819 4121 1534 197 84 35 chr2 104563128 104563499 -148693084 - MLT1B LTR MaLR 0 390 2 545 313 96 56 chr2 104563499 104563520 -148693063 - L1M4 LINE L1 -2025 4121 4102 21 0 0 0 chr2 104563557 104563578 -148693005 + AT_rich Low_complexity Low_complexity 1 21 0 2360 97 0 0 chr2 104564300 104564600 -148691983 + AluSg SINE Alu 1 300 -10 701 285 31 22 chr2 104564778 104565006 -148691577 + MIR SINE MIR 33 262 0 338 309 144 0 chr2 104566578 104566717 -148689866 - L3 LINE CR1 -5 1572 1414 479 340 45 16 chr2 104566920 104567164 -148689419 - L3 LINE CR1 -166 1411 1161 353 286 272 0 chr2 104567288 104567501 -148689082 - L3 LINE CR1 -672 905 635 1218 204 6 58 chr2 104568348 104568661 -148687922 - L1MA4 LINE L1 -7 6293 5997 187 79 53 0 chr2 104568748 104568786 -148687797 + (TA)n Simple_repeat Simple_repeat 2 41 0 1960 119 46 0 chr2 104569100 104569385 -148687198 + AluSx SINE Alu 5 302 -10 633 294 91 26 chr2 104569678 104569909 -148686674 + MIR SINE MIR 14 259 -3 228 261 69 31 chr2 104570417 104570547 -148686036 + MIR3 SINE MIR 52 186 -22 373 247 110 48 chr2 104570736 104570882 -148685701 - L2 LINE L2 0 3313 3159 2287 113 3 0 chr2 104570918 104571227 -148685356 + AluSx SINE Alu 1 310 -2 2170 99 3 0 chr2 104573178 104573462 -148683121 - AluSx SINE Alu -27 285 1 1900 116 11 7 chr2 104573659 104573935 -148682648 - AluSq SINE Alu -7 306 30 219 155 17 69 chr2 104574774 104574832 -148681751 + MIR3 SINE MIR 100 154 -54 448 175 165 0 chr2 104575165 104575262 -148681321 - MER81 DNA DNA 0 114 2 816 182 94 12 chr2 104576078 104576248 -148680335 - MER5A DNA MER1_type 0 189 6 193 374 159 0 chr2 104576756 104576863 -148679720 + MIR3 SINE MIR 37 160 -48 464 262 54 0 chr2 104576922 104577071 -148679512 - MER103 DNA DNA -9 157 1 1531 199 29 0 chr2 104578602 104578879 -148677704 + MER21B LTR ERV1 1 285 -578 1691 206 59 53 chr2 104578880 104579463 -148677120 + LTR24B LTR ERV1 1 569 -7 1945 151 88 19 chr2 104579463 104579890 -148676693 + MER21B LTR ERV1 283 794 -69 528 272 48 31 chr2 104580089 104580325 -148676258 + MIR SINE MIR 30 262 0 2077 188 98 103 chr2 104580448 104581030 -148675553 - LTR8A LTR ERV1 0 727 148 2201 120 0 3 chr2 104581030 104581339 -148675244 + AluSx SINE Alu 3 310 -2 2077 188 98 103 chr2 104581339 104581484 -148675099 - LTR8A LTR ERV1 -579 148 4 327 356 57 28 chr2 104582634 104582811 -148673772 - MIR3 SINE MIR -11 197 16 1127 246 64 55 chr2 104582835 104583287 -148673296 - MLT1C LTR MaLR -2 465 10 2674 181 77 28 chr2 104583496 104584028 -148672555 + MER74A LTR ERVL 1 558 0 216 285 93 93 chr2 104584150 104584322 -148672261 - L3 LINE CR1 -10 1567 1396 262 205 195 55 chr2 104584793 104584905 -148671678 + MIR SINE MIR 29 152 -56 974 172 23 11 chr2 104584909 104585083 -148671500 + LTR40b LTR ERVL 1 176 -286 363 270 144 44 chr2 104585109 104585653 -148670930 - L1M4c LINE L1 -4785 1430 857 365 283 125 44 chr2 104585991 104586376 -148670207 + L1ME3 LINE L1 5683 6098 -72 2200 74 30 27 chr2 104586425 104586721 -148669862 + AluSc SINE Alu 1 297 -12 512 246 171 30 chr2 104587003 104587118 -148669465 + MIR SINE MIR 36 133 -129 2078 133 0 3 chr2 104587118 104587434 -148669149 - AluSx SINE Alu 0 312 1 512 246 171 30 chr2 104587434 104587517 -148669066 + MIR SINE MIR 133 262 0 638 220 23 29 chr2 104587640 104587812 -148668771 + MIR SINE MIR 24 194 -62 1109 182 9 45 chr2 104587812 104587867 -148668716 + AluJb SINE Alu 88 143 -169 2071 136 3 13 chr2 104587867 104588176 -148668407 + AluSx SINE Alu 1 306 -6 1109 182 9 45 chr2 104588176 104588340 -148668243 + AluJb SINE Alu 143 299 -13 272 268 45 45 chr2 104588518 104588630 -148667953 - MLT1J2 LTR MaLR -1 449 338 2436 70 3 3 chr2 104588767 104589066 -148667517 - AluY SINE Alu -12 299 1 425 283 42 0 chr2 104589072 104589192 -148667391 - MLT1J1 LTR MaLR -317 129 5 384 257 79 36 chr2 104589203 104589343 -148667240 - MIR SINE MIR -111 151 6 757 276 49 53 chr2 104590260 104590672 -148665911 - LTR35 LTR ERV1 0 556 140 238 253 71 30 chr2 104590815 104590914 -148665669 - MLT1J LTR MaLR -33 478 376 2081 104 20 7 chr2 104591410 104591707 -148664876 + AluSx SINE Alu 1 301 -11 288 302 35 35 chr2 104591951 104592067 -148664516 + L2 LINE L2 3180 3295 -18 233 349 65 19 chr2 104592613 104592828 -148663755 + L2 LINE L2 433 657 -2657 320 371 30 8 chr2 104592946 104593078 -148663505 + L2 LINE L2 3138 3272 0 6353 116 8 0 chr2 104593786 104594792 -148661791 - L1PA16 LINE L1 -1 6165 5146 593 175 56 28 chr2 104594891 104595034 -148661549 - LTR65 LTR ERV1 -520 149 3 828 271 0 0 chr2 104595506 104595694 -148660889 - MER5A DNA MER1_type 0 189 2 234 67 0 0 chr2 104595838 104595868 -148660715 - MLT1F LTR MaLR 0 542 513 487 326 37 14 chr2 104595883 104596101 -148660482 + L1M4b LINE L1 11 233 -6626 2485 235 54 29 chr2 104596687 104597320 -148659263 + L1M4b LINE L1 930 1545 -5414 2003 134 0 0 chr2 104597320 104597596 -148658987 + AluSc SINE Alu 3 278 -31 273 119 0 0 chr2 104597599 104597641 -148658942 + (TA)n Simple_repeat Simple_repeat 2 43 0 2485 235 54 29 chr2 104597641 104598221 -148658362 + L1M4b LINE L1 1546 2175 -4784 * 5870 161 7 13 chr2 104598215 104599898 -148656685 + L1PB1 LINE L1 4440 6113 -38 342 0 0 0 chr2 104599904 104599942 -148656641 + (ATG)n Simple_repeat Simple_repeat 2 39 0 466 273 36 115 chr2 104599950 104599994 -148656589 + L1M4b LINE L1 2339 2385 -4753 2163 137 9 3 chr2 104599994 104600315 -148656268 + L1MC1 LINE L1 6005 6327 -6 466 273 36 115 chr2 104600315 104600407 -148656176 + L1M4b LINE L1 2385 2483 -4655 2760 131 33 17 chr2 104600407 104600828 -148655755 + MSTA LTR MaLR 1 428 0 466 273 36 115 chr2 104600828 104601108 -148655475 + L1M4b LINE L1 2483 2723 -4415 261 285 77 48 chr2 104601212 104601524 -148655059 + L1M4b LINE L1 2565 2885 -4253 1625 181 3 31 chr2 104601528 104601820 -148654763 + AluSx SINE Alu 1 284 -28 2779 242 39 18 chr2 104601926 104602823 -148653760 + L1M4b LINE L1 2892 3769 -3188 2111 117 7 10 chr2 104602823 104603122 -148653461 + AluSg SINE Alu 1 298 -12 2779 242 39 18 chr2 104603122 104603783 -148652800 + L1M4b LINE L1 3769 4986 -1971 780 285 54 20 chr2 104603786 104604097 -148652486 + L1MDb LINE L1 61 341 -6199 720 223 40 0 chr2 104604227 104604402 -148652181 + L1MDb LINE L1 2810 2991 -3549 2071 223 38 38 chr2 104605555 104605883 -148650700 + L1MDb LINE L1 2990 3317 -3223 1721 182 0 3 chr2 104605883 104606190 -148650393 + AluJo SINE Alu 1 306 -6 2071 223 38 38 chr2 104606190 104606520 -148650063 + L1MDb LINE L1 3316 3648 -2892 374 200 0 14 chr2 104606525 104606595 -148649988 - MER5B DNA MER1_type -109 69 1 2274 98 3 22 chr2 104606709 104607026 -148649557 + AluSx SINE Alu 1 311 -1 377 298 73 0 chr2 104607086 104607210 -148649373 + MIR SINE MIR 100 232 -30 297 289 24 0 chr2 104607469 104607552 -148649031 - MLT1L LTR MaLR -382 233 149 358 177 115 46 chr2 104607557 104607687 -148648896 - MER5B DNA MER1_type -39 139 1 402 259 19 46 chr2 104607819 104607892 -148648691 + MER5A DNA MER1_type 4 78 -111 1686 180 11 3 chr2 104607892 104608175 -148648408 + AluJo SINE Alu 1 285 -27 402 259 19 46 chr2 104608175 104608293 -148648290 + MER5A DNA MER1_type 78 189 0 1637 178 100 28 chr2 104608641 104609147 -148647436 - MLT2A2 LTR ERVL 0 554 16 1085 170 0 0 chr2 104609389 104609599 -148646984 - AluSq SINE Alu 0 337 128 188 0 74 0 chr2 104609602 104609629 -148646954 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2173 96 0 14 chr2 104609641 104609921 -148646662 - AluSg SINE Alu -34 276 1 413 191 19 38 chr2 104610078 104610183 -148646400 + MER53 DNA DNA 7 109 -80 937 215 49 0 chr2 104610457 104610680 -148645903 - AluSx SINE Alu -18 294 61 409 288 149 19 chr2 104611348 104611563 -148645020 - MIR SINE MIR -1 261 19 2319 106 0 10 chr2 104611564 104611876 -148644707 - AluSx SINE Alu -3 309 1 353 319 34 0 chr2 104663719 104663838 -148592745 - MER5A DNA MER1_type -4 185 63 189 191 24 0 chr2 104664799 104664841 -148591742 - MER5B DNA MER1_type -135 43 1 24 32 0 0 chr2 104665540 104665571 -148591012 + AT_rich Low_complexity Low_complexity 1 31 0 872 281 16 8 chr2 104666224 104666470 -148590113 - MIR SINE MIR -12 250 3 2604 66 0 0 chr2 104666704 104667006 -148589577 - AluSp SINE Alu -11 302 1 336 194 0 32 chr2 104667430 104667492 -148589091 - MLT1J LTR MaLR -336 175 116 1676 233 101 14 chr2 104667514 104668089 -148588494 - L1M4 LINE L1 -1226 4920 4296 1463 195 41 23 chr2 104668099 104668462 -148588121 + MLT1B LTR MaLR 6 390 0 2111 222 16 16 chr2 104668484 104669034 -148587549 - L1M4 LINE L1 -1888 4258 3709 1276 156 16 0 chr2 104669034 104669226 -148587357 + AluJb SINE Alu 86 280 -32 218 32 32 0 chr2 104669226 104669257 -148587326 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 1195 248 82 5 chr2 104669259 104669650 -148586933 - L1M4 LINE L1 -2430 3716 3296 6091 78 26 0 chr2 104669715 104670520 -148586063 + L1PA10 LINE L1 5341 6166 -2 27 49 0 0 chr2 104670539 104670580 -148586003 + AT_rich Low_complexity Low_complexity 1 41 0 376 254 57 40 chr2 104671090 104671267 -148585316 + MER5A DNA MER1_type 1 180 -9 4062 95 2 2 chr2 104671378 104671926 -148584657 - L1PA8 LINE L1 -8 6164 5617 25 0 0 0 chr2 104671936 104671961 -148584622 + AT_rich Low_complexity Low_complexity 1 25 0 1014 219 141 91 chr2 104672025 104672542 -148584041 + MLT1H LTR MaLR 1 543 -6 208 292 0 0 chr2 104674718 104674766 -148581817 - L2 LINE L2 -23 3290 3243 705 230 134 47 chr2 104676046 104676389 -148580194 - MER93b LTR ERV1 0 373 1 228 130 0 0 chr2 104676503 104676549 -148580034 + (TG)n Simple_repeat Simple_repeat 1 46 0 337 211 118 53 chr2 104676677 104676845 -148579738 - MLT1G3 LTR MaLR -175 380 155 2134 129 3 0 chr2 104677242 104677536 -148579047 - AluSx SINE Alu -17 295 1 1614 180 53 54 chr2 104677884 104678362 -148578221 + MER1B DNA MER1_type 1 324 -5 627 246 30 25 chr2 104678594 104678797 -148577786 - L1MC5 LINE L1 -48 7913 7710 * 829 260 16 30 chr2 104678785 104679111 -148577472 + L1ME1 LINE L1 5849 6332 -2 478 168 84 0 chr2 104679144 104679251 -148577332 - AluSp/q SINE Alu -9 304 189 689 80 0 120 chr2 104679251 104679376 -148577207 + AluY SINE Alu 194 303 -8 1295 120 5 39 chr2 104679376 104679584 -148576999 - AluSx SINE Alu -111 201 1 279 266 152 38 chr2 104679667 104679930 -148576653 - L1M4 LINE L1 -3117 3029 2737 2727 126 71 21 chr2 104680340 104680831 -148575752 + MLT2A1 LTR ERVL 1 513 -2 1238 40 0 7 chr2 104680833 104680984 -148575599 + HERVL-A1 LTR ERVL 1 150 -5504 1064 291 57 51 chr2 104681562 104682305 -148574278 + L1MEc LINE L1 1071 1817 -4579 825 175 0 0 chr2 104682312 104682449 -148574134 + FLAM_C SINE Alu 1 137 -6 528 172 132 35 chr2 104682452 104682626 -148573957 + L1MEc LINE L1 1823 2013 -4383 934 148 39 7 chr2 104682629 104682784 -148573799 - FRAM SINE Alu -16 160 1 525 175 92 52 chr2 104682785 104683036 -148573547 + L1MEc LINE L1 2003 2263 -4133 831 198 41 30 chr2 104683047 104683098 -148573485 - MER3 DNA MER1_type -5 204 155 1560 167 91 7 chr2 104683098 104683385 -148573198 + AluJb SINE Alu 1 311 -1 831 198 41 30 chr2 104683385 104683530 -148573053 - MER3 DNA MER1_type -54 155 6 770 249 36 42 chr2 104683538 104683868 -148572715 + L1MEc LINE L1 2231 2558 -3657 1860 251 51 11 chr2 104683872 104684419 -148572164 + L1ME1 LINE L1 70 638 -5758 332 191 79 11 chr2 104684419 104684508 -148572075 + L1MA10 LINE L1 6228 6322 -12 * 2843 245 64 21 chr2 104684488 104685504 -148571079 + L1ME1 LINE L1 3377 4436 -1779 1054 160 0 0 chr2 104685507 104685663 -148570920 + FRAM SINE Alu 1 156 -20 3117 221 32 53 chr2 104685664 104686636 -148569947 + L1ME1 LINE L1 4431 5387 -844 2179 119 7 7 chr2 104686636 104686938 -148569645 + AluSx SINE Alu 1 302 -10 3117 221 32 53 chr2 104686938 104687100 -148569483 + L1ME1 LINE L1 5387 5551 -680 1026 246 121 69 chr2 104687136 104687640 -148568943 + MLT1F1 LTR MaLR 34 563 -4 2563 232 33 14 chr2 104687644 104688286 -148568297 + L1ME1 LINE L1 5577 6230 -5 5054 159 34 26 chr2 104688294 104688809 -148567774 + L1MB1 LINE L1 4982 5492 -676 180 111 0 0 chr2 104688809 104688836 -148567747 + (CCCCCA)n Simple_repeat Simple_repeat 2 28 0 5054 159 34 26 chr2 104688836 104689499 -148567084 + L1MB1 LINE L1 5492 6162 -6 364 357 23 0 chr2 104689654 104689783 -148566800 + L2 LINE L2 3140 3271 -1 2151 117 7 0 chr2 104690715 104691005 -148565578 + AluSx SINE Alu 1 292 -20 331 300 0 23 chr2 104691936 104692066 -148564517 + MER5B DNA MER1_type 52 178 0 436 292 81 0 chr2 104692753 104692914 -148563669 + MER5B DNA MER1_type 5 178 0 191 289 13 26 chr2 104692916 104692992 -148563591 - MER5B DNA MER1_type -99 79 5 243 356 0 10 chr2 104693038 104693142 -148563441 - MIR SINE MIR 0 262 160 423 233 20 27 chr2 104693147 104693349 -148563234 - MIR SINE MIR 0 262 13 1682 186 30 33 chr2 104694017 104694383 -148562200 - MLT1A1 LTR MaLR 0 365 1 642 286 112 19 chr2 104694391 104694713 -148561870 + MLT1K LTR MaLR 228 579 -9 443 216 142 15 chr2 104694749 104694883 -148561700 + MIR SINE MIR 101 251 -11 279 268 98 85 chr2 104696034 104696351 -148560232 - MLT1L LTR MaLR -100 515 195 255 172 17 52 chr2 104696339 104696397 -148560186 - LTR67 LTR ERVL -410 147 92 * 1923 88 35 23 chr2 104696611 104696871 -148559712 + AluSg SINE Alu 16 278 -32 441 0 0 0 chr2 104696873 104696922 -148559661 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 406 335 0 6 chr2 104696932 104697093 -148559490 - MER5A DNA MER1_type -29 160 1 2225 125 3 0 chr2 104697656 104697960 -148558623 + AluSx SINE Alu 1 305 -7 277 277 59 0 chr2 104698024 104698125 -148558458 - MIR SINE MIR -91 171 65 251 297 74 17 chr2 104699138 104699313 -148557270 - MIR SINE MIR -72 190 6 197 329 15 44 chr2 104699419 104699556 -148557027 + MIR SINE MIR 17 149 -59 731 315 92 41 chr2 104699578 104700471 -148556112 + L1MEc LINE L1 51 988 -5408 3166 258 87 39 chr2 104700521 104701481 -148555102 + L1MEc LINE L1 1100 2012 -4203 6429 128 12 15 chr2 104701481 104702453 -148554130 + LTR5 LTR ERVK 1 969 0 3166 258 87 39 chr2 104702453 104703758 -148552825 + L1MEc LINE L1 2012 3764 -2451 273 172 52 0 chr2 104703759 104703817 -148552766 - MER50 LTR ERV1 -102 632 572 1138 176 36 12 chr2 104703876 104704179 -148552404 + MLT1A1 LTR MaLR 2 365 0 3149 259 70 14 chr2 104704183 104705650 -148550933 - L1PB1 LINE L1 -193 5971 4408 1222 104 0 16 chr2 104705655 104705838 -148550745 + L1PB1 LINE L1 5971 6150 -1 22 0 0 0 chr2 104705876 104705898 -148550685 + AT_rich Low_complexity Low_complexity 1 22 0 694 168 32 0 chr2 104706992 104707145 -148549438 - MIR SINE MIR -2 260 103 489 47 0 0 chr2 104707475 104707539 -148549044 + (TC)n Simple_repeat Simple_repeat 1 64 0 308 297 40 10 chr2 104708208 104708309 -148548274 + L2 LINE L2 3163 3266 -6 414 306 13 25 chr2 104708352 104708509 -148548074 - MIR SINE MIR -101 161 7 289 304 18 18 chr2 104708660 104708772 -148547811 + MIR SINE MIR 18 129 -79 210 293 135 53 chr2 104708819 104708952 -148547631 + MIR SINE MIR 20 163 -99 321 307 35 18 chr2 104708972 104709086 -148547497 - MIR SINE MIR -133 129 14 2264 256 63 89 chr2 104709358 104710348 -148546235 + L1M4b LINE L1 22 1224 -5635 241 255 39 0 chr2 104710533 104710584 -148545999 + L1M4b LINE L1 1173 1225 -5634 1280 201 9 115 chr2 104710796 104711249 -148545334 + L1M4b LINE L1 1210 1614 -5245 2196 174 77 0 chr2 104711327 104711719 -148544864 - MSTB LTR MaLR 0 426 5 2047 49 0 0 chr2 104711719 104711965 -148544618 - L1PA5 LINE L1 -2 6152 5907 1477 227 52 14 chr2 104712306 104712650 -148543933 - MER4D LTR ERV1 0 903 547 359 183 0 10 chr2 104712649 104712725 -148543858 - MER4E LTR ERV1 -589 283 100 * 1965 115 18 0 chr2 104712750 104713029 -148543554 + AluSx SINE Alu 6 289 -23 1679 149 11 11 chr2 104713065 104713346 -148543237 - MER49 LTR ERV1 -642 281 1 2026 237 39 53 chr2 104713379 104713658 -148542925 + L1M4b LINE L1 1600 1881 -5078 2255 105 3 0 chr2 104713658 104713963 -148542620 + AluSx SINE Alu 1 306 -6 2026 237 39 53 chr2 104713963 104714481 -148542102 + L1M4b LINE L1 1881 2386 -4573 2799 212 30 40 chr2 104714799 104715619 -148540964 + L1M4b LINE L1 3044 3855 -3102 2109 142 24 0 chr2 104715619 104715949 -148540634 + MER57A LTR ERV1 1 338 -65 180 248 133 62 chr2 104716106 104716219 -148540364 - L3 LINE CR1 -212 1365 1245 1802 180 30 41 chr2 104716525 104716919 -148539664 + MLT1B LTR MaLR 1 390 0 315 49 0 0 chr2 104717871 104717912 -148538671 + (TCC)n Simple_repeat Simple_repeat 1 41 0 240 341 106 24 chr2 104718586 104718832 -148537751 + L2 LINE L2 1809 2074 -1240 240 304 52 78 chr2 104718970 104719085 -148537498 + L2 LINE L2 2266 2377 -937 2559 144 24 5 chr2 104719292 104719716 -148536867 + MSTB1 LTR MaLR 1 432 0 389 338 30 55 chr2 104721042 104721279 -148535304 + MIR SINE MIR 30 260 -2 579 298 30 34 chr2 104721504 104721766 -148534817 + MLT1K LTR MaLR 328 588 0 307 279 40 0 chr2 104721831 104721937 -148534646 - MER5A DNA MER1_type -9 169 59 415 268 10 0 chr2 104722420 104722517 -148534066 + MER81 DNA DNA 17 114 0 363 235 110 29 chr2 104722971 104723107 -148533476 + MIR SINE MIR 2 148 -114 2288 191 22 75 chr2 104723323 104723908 -148532675 - MLT2B3 LTR ERVL 0 554 1 413 249 83 30 chr2 104724020 104724189 -148532394 + L1ME4a LINE L1 5574 5751 -370 365 272 161 4 chr2 104724205 104724348 -148532235 + MIR SINE MIR 10 159 -49 2139 110 7 3 chr2 104724570 104724879 -148531704 + AluSg SINE Alu 1 310 0 226 264 99 33 chr2 104724891 104724982 -148531601 + L1ME4a LINE L1 5997 6093 -28 766 143 0 45 chr2 104724991 104725111 -148531472 + FLAM_C SINE Alu 1 116 -196 226 0 0 56 chr2 104725111 104725147 -148531436 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 766 143 0 45 chr2 104725147 104725159 -148531424 + FLAM_C SINE Alu 116 127 -185 2459 195 75 75 chr2 104725998 104726801 -148529782 + L1MDb LINE L1 243 1168 -5241 1555 150 20 0 chr2 104726810 104727064 -148529519 + L1MA8 LINE L1 5997 6255 -36 237 65 0 0 chr2 104727064 104727095 -148529488 + (TA)n Simple_repeat Simple_repeat 2 32 0 360 94 0 0 chr2 104727115 104727168 -148529415 + (GGAA)n Simple_repeat Simple_repeat 2 54 0 4035 208 113 20 chr2 104727168 104728405 -148528178 + L1MDb LINE L1 1162 2513 -3893 263 318 47 0 chr2 104728412 104728497 -148528086 - MIR SINE MIR -78 130 42 272 238 0 32 chr2 104728935 104728998 -148527585 + MLT2E LTR ERVL 40 100 -528 2417 69 0 0 chr2 104729138 104729441 -148527142 - AluY SINE Alu -8 303 1 403 250 94 39 chr2 104729650 104729762 -148526821 + MLT1I LTR MaLR 21 148 -261 2144 109 0 0 chr2 104729762 104730055 -148526528 - AluSg1 SINE Alu -16 293 1 403 250 94 39 chr2 104730055 104730122 -148526461 + MLT1I LTR MaLR 148 210 -199 301 298 97 18 chr2 104730149 104730263 -148526320 + MLT1I LTR MaLR 285 407 -2 247 330 130 0 chr2 104730505 104730605 -148525978 - L2 LINE L2 -1 3312 3200 682 317 21 8 chr2 104730665 104730905 -148525678 - MIR SINE MIR 0 262 20 504 247 117 19 chr2 104732579 104732741 -148523842 - MLT1L LTR MaLR -14 601 424 453 270 47 27 chr2 104733051 104733199 -148523384 - MIR SINE MIR -58 204 54 198 245 0 38 chr2 104733315 104733368 -148523215 - L3b LINE CR1 -4 1579 1529 187 291 25 25 chr2 104733827 104733906 -148522677 - L2 LINE L2 -559 2755 2677 1044 296 107 15 chr2 104733934 104734394 -148522189 - MLT1L LTR MaLR -12 603 102 193 343 0 14 chr2 104734626 104734696 -148521887 - L3 LINE CR1 -112 1465 1397 * 498 271 47 61 chr2 104734695 104734909 -148521674 - L3 LINE CR1 -643 934 724 1686 124 60 27 chr2 104735138 104735467 -148521116 - THE1C LTR MaLR 0 375 1 720 320 94 18 chr2 104735571 104735902 -148520681 - L3 LINE CR1 -821 756 401 535 299 197 14 chr2 104736093 104736463 -148520120 + L2 LINE L2 2567 3001 -312 669 181 2 0 chr2 104736464 104736586 -148519997 + MLT1A1 LTR MaLR 255 365 0 1542 119 61 157 chr2 104736586 104736888 -148519695 + L1MB3 LINE L1 5796 6047 -136 2059 82 4 0 chr2 104736888 104737155 -148519428 + AluSx SINE Alu 1 268 -44 1542 119 61 157 chr2 104737155 104737279 -148519304 + L1MB3 LINE L1 6047 6181 -2 238 247 41 14 chr2 104737328 104737401 -148519182 + LTR16C LTR ERVL 417 491 0 2328 49 0 52 chr2 104738233 104738559 -148518024 - AluY SINE Alu -2 309 1 193 279 49 66 chr2 104738580 104738641 -148517942 + MIR SINE MIR 20 79 -183 659 142 189 0 chr2 104738654 104738802 -148517781 - MER5A DNA MER1_type -6 183 4 717 260 64 83 chr2 104738896 104739411 -148517172 - MLT1J LTR MaLR -6 505 1 271 345 95 26 chr2 104739651 104740042 -148516541 + L2 LINE L2 1789 2206 -1108 783 180 58 35 chr2 104740099 104740271 -148516312 + MER58A DNA MER1_type 45 220 -4 1888 126 3 47 chr2 104740280 104740598 -148515985 - AluJb SINE Alu -8 304 1 292 291 149 7 chr2 104740654 104740795 -148515788 + L2 LINE L2 2267 2427 -887 2219 132 24 21 chr2 104740871 104741243 -148515340 + THE1C LTR MaLR 3 375 0 1842 220 78 38 chr2 104742099 104742599 -148513984 + MLT2B1 LTR ERVL 1 520 0 22 56 0 0 chr2 104742956 104742992 -148513591 + AT_rich Low_complexity Low_complexity 1 36 0 389 234 134 47 chr2 104743514 104743685 -148512898 + MIR SINE MIR 71 256 -6 321 376 5 49 chr2 104743692 104743897 -148512686 + L2 LINE L2 2590 2785 -529 234 342 67 8 chr2 104744183 104744303 -148512280 + L2 LINE L2 3097 3223 -49 312 298 36 12 chr2 104745027 104745111 -148511472 - L2 LINE L2 0 3272 3187 194 315 0 0 chr2 104745601 104745655 -148510928 - MIR SINE MIR -108 154 101 763 237 123 26 chr2 104747281 104747509 -148509074 + MIR SINE MIR 13 262 0 2200 105 0 3 chr2 104747597 104747910 -148508673 - AluSx SINE Alu 0 312 1 2062 117 0 3 chr2 104748382 104748680 -148507903 + AluSx SINE Alu 1 297 -15 309 258 125 17 chr2 104748692 104748812 -148507771 - L1ME4a LINE L1 -133 5988 5856 252 86 0 0 chr2 104748812 104748847 -148507736 + (TG)n Simple_repeat Simple_repeat 1 35 0 3148 162 10 2 chr2 104749061 104749568 -148507015 + MLT2B2 LTR ERVL 5 515 0 2286 149 15 33 chr2 104749676 104749819 -148506764 - MLT1B LTR MaLR 0 390 246 2033 92 7 0 chr2 104749819 104750090 -148506493 - AluSp SINE Alu -22 291 19 2286 149 15 33 chr2 104750090 104750343 -148506240 - MLT1B LTR MaLR -144 246 1 192 77 0 0 chr2 104750807 104750833 -148505750 + (A)n Simple_repeat Simple_repeat 1 26 0 292 349 53 20 chr2 104750898 104751050 -148505533 - MIR SINE MIR -56 206 50 199 321 62 18 chr2 104751214 104751326 -148505257 + MIR3 SINE MIR 82 198 -10 661 178 0 0 chr2 104751501 104751608 -148504975 + FLAM_C SINE Alu 2 108 -35 228 91 0 0 chr2 104751613 104751646 -148504937 - tRNA-Ile-ATT tRNA tRNA -38 39 7 508 176 97 48 chr2 104751651 104751816 -148504767 + L1M4 LINE L1 2232 2404 -3742 1016 142 0 7 chr2 104751819 104751974 -148504609 - MER47A DNA MER2_type -212 154 1 397 139 14 0 chr2 104751979 104752051 -148504532 + L1MB7 LINE L1 6097 6169 -15 332 281 0 12 chr2 104753628 104753710 -148502873 + Tigger3(Golem) DNA MER2_type 2 82 -2947 * 1763 99 45 93 chr2 104753696 104753798 -148502785 + Tigger3(Golem) DNA MER2_type 2711 2816 -212 2273 93 0 10 chr2 104753805 104754117 -148502466 - AluSg SINE Alu -1 309 1 742 123 54 15 chr2 104754117 104754239 -148502344 - L1PA15 LINE L1 -6 6159 6030 1763 99 45 93 chr2 104754239 104754263 -148502320 + Tigger3(Golem) DNA MER2_type 2816 2840 -188 1362 199 134 0 chr2 104754263 104754570 -148502013 - MER7A DNA MER2_type 0 346 1 1763 99 45 93 chr2 104754570 104754776 -148501807 + Tigger3(Golem) DNA MER2_type 2840 3028 0 728 324 5 0 chr2 104754790 104754997 -148501586 - MIR SINE MIR -8 254 47 514 285 131 0 chr2 104755917 104756066 -148500517 - MIR SINE MIR -58 150 15 203 324 171 9 chr2 104756077 104756182 -148500401 - L2 LINE L2 -26 3246 3125 1513 266 54 30 chr2 104756236 104756733 -148499850 + MER68 LTR ERV1 53 561 -1 337 296 95 32 chr2 104757038 104757227 -148499356 - L2 LINE L2 -508 2806 2606 1812 150 7 0 chr2 104757707 104758001 -148498582 + AluJo SINE Alu 2 297 -15 822 146 0 0 chr2 104759230 104759353 -148497230 + FLAM_C SINE Alu 3 125 -18 360 133 0 0 chr2 104759820 104759880 -148496703 + (TTCC)n Simple_repeat Simple_repeat 3 62 0 194 277 126 19 chr2 104759967 104760126 -148496457 + L2 LINE L2 2354 2529 -785 234 282 118 0 chr2 104760709 104760794 -148495789 + L2 LINE L2 2652 2746 -568 1082 186 5 19 chr2 104760797 104761012 -148495571 + L1M3 LINE L1 5451 5662 -509 1049 89 7 7 chr2 104761012 104761147 -148495436 + AluSq/x SINE Alu 1 135 -178 2073 114 10 24 chr2 104761147 104761445 -148495138 + AluSx SINE Alu 1 294 -18 2432 64 7 3 chr2 104761458 104761754 -148494829 + AluY SINE Alu 1 297 -14 394 185 17 109 chr2 104761768 104761887 -148494696 - L1M3 LINE L1 -363 5808 5701 382 279 130 7 chr2 104762381 104762535 -148494048 - MIR SINE MIR 0 262 90 192 265 29 78 chr2 104763017 104763119 -148493464 + MIR SINE MIR 109 205 -57 565 218 120 21 chr2 104763263 104763405 -148493178 - MIR SINE MIR -12 250 95 323 245 35 49 chr2 104764870 104765013 -148491570 + MLT1K LTR MaLR 445 585 -3 1743 163 59 19 chr2 104765336 104765561 -148491022 - MLT1B LTR MaLR 0 390 143 2849 122 37 54 chr2 104765561 104766043 -148490540 + MER101 LTR ERV1 1 474 0 1743 163 59 19 chr2 104766043 104766192 -148490391 - MLT1B LTR MaLR -247 143 1 490 290 6 12 chr2 104767043 104767205 -148489378 + MER105 DNA DNA 1 161 -43 513 214 94 0 chr2 104767444 104767561 -148489022 - MER3 DNA MER1_type 0 209 82 2259 91 3 7 chr2 104767595 104767907 -148488676 - AluSp SINE Alu 0 311 1 26 0 0 0 chr2 104768082 104768108 -148488475 + AT_rich Low_complexity Low_complexity 1 26 0 1976 175 35 15 chr2 104768453 104768853 -148487730 - L1MB3 LINE L1 -8 6175 5768 444 281 157 64 chr2 104769642 104770180 -148486403 - L2 LINE L2 -3 3269 2692 971 196 101 109 chr2 104770189 104770505 -148486078 - MLT1D LTR MaLR -8 497 185 2166 108 0 0 chr2 104770505 104770784 -148485799 - AluSx SINE Alu -33 279 1 971 196 101 109 chr2 104770784 104770961 -148485622 - MLT1D LTR MaLR -320 185 8 346 335 122 22 chr2 104771689 104772361 -148484222 - L2 LINE L2 -49 3223 2481 438 295 55 28 chr2 104772664 104772881 -148483702 - MLT1L LTR MaLR -73 542 320 465 258 148 22 chr2 104772967 104773196 -148483387 - MIR SINE MIR -3 259 2 1293 212 75 31 chr2 104773568 104773796 -148482787 - MLT1A1 LTR MaLR 0 365 115 2551 57 0 7 chr2 104773796 104774092 -148482491 + AluY SINE Alu 1 294 -17 1293 212 75 31 chr2 104774092 104774212 -148482371 - MLT1A1 LTR MaLR -250 115 2 285 358 81 26 chr2 104774268 104774539 -148482044 + L2 LINE L2 2151 2436 -878 1585 102 5 0 chr2 104775145 104775350 -148481233 + AluSq SINE Alu 1 206 -107 1041 225 104 69 chr2 104775359 104775410 -148481173 + MLT1C LTR MaLR 48 96 -371 2572 77 0 0 chr2 104775410 104775721 -148480862 + AluY SINE Alu 1 311 0 1041 225 104 69 chr2 104775721 104776073 -148480510 + MLT1C LTR MaLR 96 465 -2 403 250 31 0 chr2 104778014 104778110 -148478473 + MIR SINE MIR 80 178 -84 353 242 132 28 chr2 104779071 104779253 -148477330 + LTR67 LTR ERVL 357 557 0 1996 149 16 75 chr2 104780184 104780255 -148476328 - MLT1A1 LTR MaLR 0 365 291 1602 156 6 98 chr2 104780255 104780581 -148476002 + AluJo SINE Alu 1 296 -16 1996 149 16 75 chr2 104780581 104780897 -148475686 - MLT1A1 LTR MaLR -74 291 1 1985 149 70 14 chr2 104781931 104782286 -148474297 - THE1C LTR MaLR 0 375 1 233 283 0 0 chr2 104782629 104782682 -148473901 + GA-rich Low_complexity Low_complexity 3 55 0 3921 150 33 8 chr2 104783116 104783821 -148472762 + L1MB3 LINE L1 5452 6173 -10 235 312 82 78 chr2 104784153 104784384 -148472199 - MIR SINE MIR -30 232 1 300 222 83 0 chr2 104784497 104784569 -148472014 + MER91C DNA MER1_type 63 140 0 363 317 140 0 chr2 104785372 104785536 -148471047 + MIR SINE MIR 58 244 -18 32 20 0 20 chr2 104785863 104785877 -148470706 + AT_rich Low_complexity Low_complexity 1 14 -35 362 203 0 0 chr2 104785877 104785956 -148470627 + L1PB4 LINE L1 6071 6149 -7 32 20 0 20 chr2 104785956 104785991 -148470592 + AT_rich Low_complexity Low_complexity 14 49 0 263 336 16 39 chr2 104786192 104786320 -148470263 - L2 LINE L2 -1061 2253 2129 188 318 34 23 chr2 104786484 104786572 -148470011 - L2 LINE L2 -219 3053 2965 2241 100 0 23 chr2 104786692 104786993 -148469590 + AluSx SINE Alu 1 294 -18 216 300 0 0 chr2 104787987 104788047 -148468536 + GA-rich Low_complexity Low_complexity 1 60 0 4099 187 32 44 chr2 104788138 104789417 -148467166 - L1MB8 LINE L1 -4 6174 4909 2262 138 0 0 chr2 104789417 104789729 -148466854 + AluSx SINE Alu 1 312 0 4099 187 32 44 chr2 104789729 104789839 -148466744 - L1MB8 LINE L1 -1269 4909 4799 222 339 9 18 chr2 104790279 104790391 -148466192 + GA-rich Low_complexity Low_complexity 4 114 0 632 271 65 36 chr2 104790433 104790680 -148465903 + MIR SINE MIR 2 255 -7 762 222 21 26 chr2 104790737 104790926 -148465657 - MER5A DNA MER1_type 0 189 2 325 347 131 9 chr2 104792787 104793009 -148463574 + MIR SINE MIR 14 262 0 2490 150 73 23 chr2 104793052 104793571 -148463012 + L1MC1 LINE L1 5785 6329 -4 21 0 0 0 chr2 104794044 104794065 -148462518 + AT_rich Low_complexity Low_complexity 1 21 0 849 137 23 8 chr2 104794065 104794196 -148462387 - FLAM_C SINE Alu 0 133 1 245 319 122 67 chr2 104795107 104795345 -148461238 + L2 LINE L2 3017 3267 -5 207 197 33 33 chr2 104797520 104797581 -148459002 + (CCCCAG)n Simple_repeat Simple_repeat 4 64 0 266 149 0 46 chr2 104797763 104797850 -148458733 + (GGA)n Simple_repeat Simple_repeat 1 83 0 219 69 0 0 chr2 104797979 104798008 -148458575 + (CGG)n Simple_repeat Simple_repeat 3 31 0 27 29 0 0 chr2 104798107 104798141 -148458442 + GC_rich Low_complexity Low_complexity 1 34 0 248 279 48 39 chr2 104800739 104800843 -148455740 + L2 LINE L2 3168 3272 0 286 217 283 0 chr2 104801249 104801355 -148455228 - MER5A DNA MER1_type -21 168 33 216 296 237 7 chr2 104801656 104801791 -148454792 + MIR SINE MIR 21 186 -76 508 246 89 15 chr2 104803385 104803588 -148452995 + MLT1L LTR MaLR 176 393 -222 294 274 148 54 chr2 104803771 104803895 -148452688 - L1ME4a LINE L1 -82 6039 5928 2283 101 3 22 chr2 104803895 104804211 -148452372 + AluSg SINE Alu 1 310 0 294 274 148 54 chr2 104804211 104804608 -148451975 - L1ME4a LINE L1 -193 5928 5469 329 234 131 0 chr2 104804627 104804734 -148451849 - L1ME4a LINE L1 -201 5920 5800 5710 154 21 34 chr2 104805112 104806912 -148449671 - L1PA16 LINE L1 0 6166 4408 1553 93 138 9 chr2 104806912 104807137 -148449446 - AluSg1 SINE Alu -6 303 50 5710 154 21 34 chr2 104807137 104807490 -148449093 - L1PA16 LINE L1 -1758 4408 4052 340 329 52 0 chr2 104807560 104807770 -148448813 + HAL1 LINE L1 743 963 -1544 2350 59 7 3 chr2 104808056 104808362 -148448221 - L1PA5 LINE L1 0 6154 5848 2266 117 13 0 chr2 104808751 104809059 -148447524 + AluSx SINE Alu 1 312 0 292 230 44 5 chr2 104810967 104811044 -148445539 + MIR SINE MIR 85 162 -46 251 194 28 56 chr2 104811724 104811796 -148444787 - MIR3 SINE MIR -29 179 110 1917 95 0 75 chr2 104812414 104812748 -148443835 - AluSx SINE Alu 0 311 1 269 322 58 8 chr2 104812850 104812971 -148443612 - MIR SINE MIR -59 203 77 1696 110 68 81 chr2 104815037 104815346 -148441237 - AluSp SINE Alu -8 305 1 371 207 11 0 chr2 104815599 104815686 -148440897 - MIR3 SINE MIR -7 201 114 23 0 0 0 chr2 104815907 104815930 -148440653 + AT_rich Low_complexity Low_complexity 1 23 0 2163 114 0 0 chr2 104816014 104816311 -148440272 - AluSq SINE Alu -16 297 1 29 28 0 0 chr2 104816601 104816637 -148439946 + AT_rich Low_complexity Low_complexity 1 36 0 426 158 0 49 chr2 104816637 104816719 -148439864 + Tigger2 DNA MER2_type 1 78 -2640 * 2251 147 49 62 chr2 104816697 104816851 -148439732 + Tigger2 DNA MER2_type 2273 2428 -290 194 62 31 0 chr2 104816851 104816883 -148439700 + (TTG)n Simple_repeat Simple_repeat 1 33 0 1966 116 0 0 chr2 104816887 104817162 -148439421 - AluSx SINE Alu -37 275 1 2251 147 49 62 chr2 104817162 104817452 -148439131 + Tigger2 DNA MER2_type 2431 2716 -2 264 262 166 21 chr2 104817809 104817954 -148438629 + L2 LINE L2 2924 3089 -183 691 315 32 4 chr2 104818622 104818873 -148437710 + MIR SINE MIR 5 262 0 2068 108 3 20 chr2 104818886 104819191 -148437392 + AluSq SINE Alu 1 300 -13 435 235 6 22 chr2 104819402 104819581 -148437002 + (CATA)n Simple_repeat Simple_repeat 4 179 0 187 261 14 29 chr2 104819650 104819788 -148436795 + (CATATA)n Simple_repeat Simple_repeat 6 141 0 264 59 0 0 chr2 104819810 104819844 -148436739 + (CA)n Simple_repeat Simple_repeat 2 35 0 1031 206 11 0 chr2 104819844 104820028 -148436555 - LTR68 LTR ERV1 -258 482 297 226 255 81 67 chr2 104820219 104820368 -148436215 + LTR40b LTR ERVL 305 455 -7 2327 82 0 0 chr2 104820672 104820965 -148435618 + AluSc SINE Alu 1 293 -16 2787 180 31 13 chr2 104822631 104823180 -148433403 - MER89 LTR ERV1 0 559 1 500 234 201 0 chr2 104824469 104824623 -148431960 - MIR SINE MIR 0 262 78 470 101 25 0 chr2 104825025 104825104 -148431479 + L1MB4 LINE L1 6099 6179 -1 2357 64 0 3 chr2 104825108 104825403 -148431180 - AluY SINE Alu -17 294 1 276 297 47 16 chr2 104827096 104827224 -148429359 + MIR3 SINE MIR 2 133 -75 291 122 0 0 chr2 104827745 104827794 -148428789 + (A)n Simple_repeat Simple_repeat 1 49 0 2513 163 27 29 chr2 104828261 104828404 -148428179 + L1MB2 LINE L1 5686 5828 -343 2388 90 0 0 chr2 104828404 104828714 -148427869 + AluSq SINE Alu 1 310 -3 2513 163 27 29 chr2 104828714 104829055 -148427528 + L1MB2 LINE L1 5828 6169 -2 428 250 80 38 chr2 104829249 104829461 -148427122 + L1ME4a LINE L1 5705 5925 -196 238 352 48 0 chr2 104829735 104829840 -148426743 - MIR SINE MIR -79 183 74 2469 55 0 3 chr2 104829848 104830158 -148426425 + AluY SINE Alu 1 309 -2 29 0 0 0 chr2 104830601 104830630 -148425953 + AT_rich Low_complexity Low_complexity 1 29 0 1301 152 116 29 chr2 104831633 104831909 -148424674 + AluJb SINE Alu 3 302 0 307 260 89 35 chr2 104832247 104832416 -148424167 - MLT1K LTR MaLR -278 310 133 971 193 30 50 chr2 104832591 104832892 -148423691 + MER33 DNA MER1_type 30 324 0 204 294 108 0 chr2 104833415 104833517 -148423066 - L2 LINE L2 0 3313 3201 186 43 0 0 chr2 104834445 104834468 -148422115 + (CGGGGG)n Simple_repeat Simple_repeat 3 25 0 2301 71 27 0 chr2 104834761 104835055 -148421528 + AluSq SINE Alu 1 302 -11 243 248 238 0 chr2 104835088 104835193 -148421390 - L2 LINE L2 -1 3271 3142 1966 105 14 7 chr2 104836722 104837008 -148419575 + AluSx SINE Alu 3 290 -22 322 293 109 64 chr2 104837093 104837376 -148419207 - L2 LINE L2 -35 3237 2942 3981 192 144 12 chr2 104837523 104838590 -148417993 - L1MC4 LINE L1 0 8042 6835 1485 158 92 0 chr2 104838620 104838904 -148417679 - AluJo SINE Alu -2 310 1 611 315 167 11 chr2 104838909 104839382 -148417201 - L2 LINE L2 -536 2778 2232 213 229 21 0 chr2 104839706 104839754 -148416829 + (TATG)n Simple_repeat Simple_repeat 3 51 0 225 108 0 0 chr2 104841055 104841092 -148415491 + (TTGG)n Simple_repeat Simple_repeat 2 38 0 2099 180 134 2 chr2 104842470 104842931 -148413652 - Charlie1b DNA MER1_type 0 523 2 322 263 105 15 chr2 104844400 104844533 -148412050 - L2 LINE L2 0 3313 3169 636 251 90 57 chr2 104844858 104845336 -148411247 - L1MEd LINE L1 -3419 2710 2217 194 0 0 37 chr2 104845434 104845461 -148411122 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 691 171 0 17 chr2 104845461 104845578 -148411005 - AluJb SINE Alu -197 115 1 22 35 0 0 chr2 104845585 104845614 -148410969 + AT_rich Low_complexity Low_complexity 1 29 0 32 57 0 0 chr2 104845692 104845745 -148410838 + AT_rich Low_complexity Low_complexity 1 53 0 1139 291 73 57 chr2 104845832 104846671 -148409912 - L1MEd LINE L1 -4614 1696 805 1876 133 13 23 chr2 104846671 104846973 -148409610 - AluSx SINE Alu -13 299 1 1139 291 73 57 chr2 104846973 104847340 -148409243 - L1MEd LINE L1 -5505 805 445 2332 66 17 0 chr2 104847635 104847936 -148408647 - AluY SINE Alu -5 306 1 1870 137 14 0 chr2 104848144 104848429 -148408154 - AluJb SINE Alu -23 289 1 584 183 48 63 chr2 104848826 104848952 -148407631 + MER58A DNA MER1_type 1 124 0 1882 164 7 0 chr2 104849064 104849368 -148407215 - AluSx SINE Alu -6 306 1 577 267 184 5 chr2 104849941 104850158 -148406425 + MIR SINE MIR 6 261 -1 230 290 159 14 chr2 104850167 104850305 -148406278 + MIR SINE MIR 100 257 -5 839 119 0 2 chr2 104850758 104851010 -148405573 + AluSx SINE Alu 1 303 -9 345 330 0 0 chr2 104851023 104851114 -148405469 - L1MC4 LINE L1 -1339 6703 6613 1720 130 4 18 chr2 104851708 104851985 -148404598 - AluSq SINE Alu -5 308 36 2219 100 0 3 chr2 104852195 104852495 -148404088 + AluSx SINE Alu 1 299 -13 1961 170 66 21 chr2 104852795 104853172 -148403411 + L1MB2 LINE L1 5776 6169 -2 21 0 0 0 chr2 104853172 104853193 -148403390 + AT_rich Low_complexity Low_complexity 1 21 0 405 0 0 0 chr2 104853197 104853242 -148403341 + (CA)n Simple_repeat Simple_repeat 2 46 0 254 249 22 31 chr2 104854220 104854306 -148402277 + MER5A DNA MER1_type 90 182 -7 218 299 13 52 chr2 104854241 104854318 -148402265 - MER5A DNA MER1_type -106 83 10 * 2143 62 69 3 chr2 104854919 104855207 -148401376 + AluY SINE Alu 1 307 -4 2135 97 23 3 chr2 104856576 104856875 -148399708 + AluSx SINE Alu 1 305 -7 1275 227 68 52 chr2 104856943 104857427 -148399156 - L1MA9 LINE L1 -8 6304 5813 225 353 24 0 chr2 104857716 104857801 -148398782 + L3 LINE CR1 1180 1266 -311 3136 173 58 41 chr2 104857808 104858518 -148398065 + L1MB5 LINE L1 5453 6174 0 292 278 98 8 chr2 104858741 104858874 -148397709 - MER5B DNA MER1_type 0 178 34 218 303 45 0 chr2 104858991 104859080 -148397503 + MER5A DNA MER1_type 14 106 -83 2040 115 0 3 chr2 104859142 104859438 -148397145 + AluSx SINE Alu 1 295 -17 496 255 48 14 chr2 104859832 104859977 -148396606 - L1MD2 LINE L1 -14 6345 6196 2254 68 0 13 chr2 104860067 104860375 -148396208 + AluY SINE Alu 1 304 -7 204 67 0 0 chr2 104860508 104860538 -148396045 + (TCTCTG)n Simple_repeat Simple_repeat 3 32 0 204 390 0 12 chr2 104861517 104861599 -148394984 - MIR SINE MIR -116 146 66 29 0 0 0 chr2 104862606 104862635 -148393948 + AT_rich Low_complexity Low_complexity 1 29 0 2206 84 0 7 chr2 104862693 104862989 -148393594 - AluY SINE Alu -17 294 1 1738 139 50 0 chr2 104863419 104863700 -148392883 - AluSx SINE Alu -17 295 1 21 0 0 0 chr2 104863764 104863785 -148392798 + AT_rich Low_complexity Low_complexity 1 21 0 220 181 181 14 chr2 104864345 104864417 -148392166 - MIR SINE MIR -132 130 47 192 77 0 0 chr2 104865409 104865435 -148391148 + (T)n Simple_repeat Simple_repeat 1 26 0 252 146 12 73 chr2 104865567 104865649 -148390934 + (TTATA)n Simple_repeat Simple_repeat 3 79 0 1597 288 66 21 chr2 104866669 104867392 -148389191 + HAL1b LINE L1 95 850 -498 262 227 15 0 chr2 104867691 104867757 -148388826 + CT-rich Low_complexity Low_complexity 4 70 0 192 40 0 0 chr2 104867820 104867845 -148388738 + (CAA)n Simple_repeat Simple_repeat 2 26 0 4017 148 79 107 chr2 104867947 104868899 -148387684 + MER21A LTR ERV1 1 925 -6 275 264 16 32 chr2 104868916 104869041 -148387542 + L1M4 LINE L1 2178 2300 -3846 2929 107 42 7 chr2 104869043 104869472 -148387111 - MLT2A1 LTR ERVL 0 444 1 20063 60 14 0 chr2 104869472 104871901 -148384682 - HERVL-A1 LTR ERVL 0 5654 3193 1195 36 21 0 chr2 104871902 104872042 -148384541 - HERVL-A1 LTR ERVL -3118 2536 2394 * 10140 69 13 1 chr2 104872039 104873314 -148383269 - HERVL LTR ERVL -2466 3188 1898 4427 78 30 0 chr2 104873313 104873879 -148382704 - HERVL LTR ERVL -4795 859 277 * 244 279 48 39 chr2 104876492 104876596 -148379987 + L2 LINE L2 3168 3272 0 279 217 283 0 chr2 104877002 104877108 -148379475 - MER5A DNA MER1_type -21 168 33 213 296 237 7 chr2 104877409 104877544 -148379039 + MIR SINE MIR 21 186 -76 592 286 133 39 chr2 104879000 104879541 -148377042 + MLT1L LTR MaLR 18 609 -6 295 284 155 43 chr2 104879556 104879648 -148376935 - L1ME4a LINE L1 -108 6013 5933 2129 101 3 22 chr2 104879648 104879964 -148376619 + AluSg SINE Alu 1 310 0 295 284 155 43 chr2 104879964 104880361 -148376222 - L1ME4a LINE L1 -188 5933 5469 324 234 131 0 chr2 104880380 104880487 -148376096 - L1ME4a LINE L1 -201 5920 5800 5719 148 25 22 chr2 104880865 104882660 -148373923 - L1PA16 LINE L1 0 6166 4375 1441 93 138 9 chr2 104882665 104882890 -148373693 - AluSg1 SINE Alu -6 303 50 1608 186 3 33 chr2 104882903 104883236 -148373347 - L1 LINE L1 -1763 4383 4061 370 329 52 0 chr2 104883313 104883523 -148373060 + HAL1 LINE L1 743 963 -1544 2346 59 7 3 chr2 104883809 104884115 -148372468 - L1PA5 LINE L1 0 6154 5848 2108 117 13 0 chr2 104884504 104884812 -148371771 + AluSx SINE Alu 1 312 0 290 230 44 5 chr2 104886720 104886797 -148369786 + MIR SINE MIR 85 162 -46 251 194 28 56 chr2 104887477 104887549 -148369034 - MIR3 SINE MIR -29 179 110 1917 95 0 75 chr2 104888167 104888501 -148368082 - AluSx SINE Alu 0 311 1 269 322 58 8 chr2 104888603 104888724 -148367859 - MIR SINE MIR -59 203 77 1696 110 68 81 chr2 104890790 104891099 -148365484 - AluSp SINE Alu -8 305 1 371 207 11 0 chr2 104891352 104891439 -148365144 - MIR3 SINE MIR -7 201 114 23 0 0 0 chr2 104891660 104891683 -148364900 + AT_rich Low_complexity Low_complexity 1 23 0 2163 114 0 0 chr2 104891767 104892064 -148364519 - AluSq SINE Alu -16 297 1 29 28 0 0 chr2 104892354 104892390 -148364193 + AT_rich Low_complexity Low_complexity 1 36 0 426 158 0 49 chr2 104892390 104892472 -148364111 + Tigger2 DNA MER2_type 1 78 -2640 * 2251 147 49 62 chr2 104892450 104892604 -148363979 + Tigger2 DNA MER2_type 2273 2428 -290 194 62 31 0 chr2 104892604 104892636 -148363947 + (TTG)n Simple_repeat Simple_repeat 1 33 0 1966 116 0 0 chr2 104892640 104892915 -148363668 - AluSx SINE Alu -37 275 1 2251 147 49 62 chr2 104892915 104893205 -148363378 + Tigger2 DNA MER2_type 2431 2716 -2 264 262 166 21 chr2 104893562 104893707 -148362876 + L2 LINE L2 2924 3089 -183 691 315 32 4 chr2 104894375 104894626 -148361957 + MIR SINE MIR 5 262 0 2068 108 3 20 chr2 104894639 104894944 -148361639 + AluSq SINE Alu 1 300 -13 435 235 6 22 chr2 104895155 104895334 -148361249 + (CATA)n Simple_repeat Simple_repeat 4 179 0 187 261 14 29 chr2 104895403 104895541 -148361042 + (CATATA)n Simple_repeat Simple_repeat 6 141 0 264 59 0 0 chr2 104895563 104895597 -148360986 + (CA)n Simple_repeat Simple_repeat 2 35 0 1031 206 11 0 chr2 104895597 104895781 -148360802 - LTR68 LTR ERV1 -258 482 297 244 255 0 0 chr2 104896872 104896923 -148359660 - L1MC4 LINE L1 -644 7398 7348 182 207 0 0 chr2 104896933 104896962 -148359621 - L2 LINE L2 -7 3265 3237 204 316 31 10 chr2 104898261 104898359 -148358224 + L2 LINE L2 2873 2972 -300 2496 50 0 0 chr2 104898664 104898961 -148357622 + AluY SINE Alu 3 299 -12 2032 123 10 3 chr2 104900420 104900729 -148355854 - AluSx SINE Alu -1 311 1 1202 200 18 0 chr2 104901403 104901623 -148354960 + MER58A DNA MER1_type 1 224 0 4210 133 59 4 chr2 104902078 104902757 -148353826 - LTR62 LTR ERVK -3 716 1 285 330 47 37 chr2 104902973 104903188 -148353395 - MIR SINE MIR -13 249 33 212 314 76 34 chr2 104903902 104904020 -148352563 - MIR SINE MIR -111 151 29 228 135 0 0 chr2 104904518 104904555 -148352028 + (TCCC)n Simple_repeat Simple_repeat 4 40 0 190 263 0 18 chr2 104904562 104904608 -148351975 - L2 LINE L2 -5 3267 3221 2771 83 11 3 chr2 104904608 104904980 -148351603 - THE1C LTR MaLR 0 375 1 288 167 50 0 chr2 104905133 104905193 -148351390 + L2 LINE L2 2720 2782 -532 299 326 110 25 chr2 104905245 104905490 -148351093 + L2 LINE L2 2925 3190 -123 775 256 38 61 chr2 104905672 104905798 -148350785 + L1MB3 LINE L1 4488 4615 -1531 1285 200 109 8 chr2 104905798 104906063 -148350520 - AluJo SINE Alu -9 293 2 775 256 38 61 chr2 104906063 104906249 -148350334 + L1MB3 LINE L1 4615 4793 -1353 2014 189 129 44 chr2 104906592 104906932 -148349651 + L1MC3 LINE L1 7235 7633 -152 2056 119 3 3 chr2 104906932 104907235 -148349348 - AluSx SINE Alu -9 303 1 2014 189 129 44 chr2 104907235 104907396 -148349187 + L1MC3 LINE L1 7633 7779 -6 1390 233 92 37 chr2 104907459 104908328 -148348255 + L1MB3 LINE L1 4789 5694 -470 1234 188 35 8 chr2 104908319 104908574 -148348009 - L1MC4a LINE L1 -484 7324 7063 * 743 149 16 0 chr2 104908602 104908723 -148347860 - BC200 scRNA scRNA -61 139 17 410 229 28 0 chr2 104908734 104908843 -148347740 - L1MD3 LINE L1 -847 7148 7037 318 238 189 8 chr2 104908937 104909059 -148347524 - L1MC4a LINE L1 -835 6973 6830 336 171 105 13 chr2 104909282 104909358 -148347225 + LTR33 LTR ERVL 133 215 -306 258 319 62 24 chr2 104909392 104909602 -148346981 + LTR33 LTR ERVL 304 521 0 316 321 95 40 chr2 104909701 104909953 -148346630 - L3b LINE CR1 -204 1379 1114 2005 203 62 0 chr2 104910009 104910443 -148346140 + L1MB3 LINE L1 5716 6176 -7 670 170 113 90 chr2 104912025 104912237 -148344346 + Charlie1 DNA MER1_type 1 217 -2544 496 191 0 0 chr2 104912254 104912343 -148344240 + Charlie1 DNA MER1_type 2673 2761 0 24 0 0 0 chr2 104912416 104912440 -148344143 + AT_rich Low_complexity Low_complexity 1 24 0 212 362 0 0 chr2 104912833 104912902 -148343681 + MIR SINE MIR 31 99 -109 196 215 32 129 chr2 104912900 104912993 -148343590 - MIR SINE MIR 0 262 179 * 261 292 56 56 chr2 104914053 104914214 -148342369 + MIR SINE MIR 26 186 -76 646 133 0 0 chr2 104914308 104914406 -148342177 - AluSg/x SINE Alu -18 292 195 638 314 42 20 chr2 104914447 104914691 -148341892 - MIR SINE MIR -5 257 9 306 0 0 0 chr2 104915201 104915235 -148341348 + (CA)n Simple_repeat Simple_repeat 2 35 0 532 251 111 6 chr2 104915783 104915954 -148340629 + MIR SINE MIR 2 190 -72 617 243 175 10 chr2 104916005 104916211 -148340372 - MIR SINE MIR -6 256 17 2036 121 3 20 chr2 104918232 104918538 -148338045 - AluSx SINE Alu -11 301 1 21 57 0 0 chr2 104919054 104919089 -148337494 + AT_rich Low_complexity Low_complexity 1 35 0 800 115 9 0 chr2 104919142 104919255 -148337328 - AluSp/q SINE Alu -20 293 180 327 288 0 0 chr2 104919255 104919335 -148337248 - L1ME4a LINE L1 -79 6042 5963 2113 112 0 0 chr2 104919348 104919642 -148336941 - AluSx SINE Alu -18 294 1 318 26 0 0 chr2 104919926 104919965 -148336618 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 661 320 107 0 chr2 104920134 104920368 -148336215 - MLT1G1 LTR MaLR 0 595 337 608 290 15 30 chr2 104920391 104920618 -148335965 - MLT1G1 LTR MaLR -344 223 1 248 294 49 49 chr2 104920619 104920762 -148335821 - MIR3 SINE MIR -56 152 10 255 374 0 0 chr2 104922472 104922595 -148333988 + L1MD2 LINE L1 31 153 -6387 4684 232 107 24 chr2 104923299 104924946 -148331637 + L1MD2 LINE L1 1798 3716 -2824 2097 124 0 3 chr2 104924946 104925253 -148331330 + AluSq SINE Alu 1 306 -7 4684 232 107 24 chr2 104925253 104925955 -148330628 + L1MD2 LINE L1 3716 4358 -2182 2945 241 36 6 chr2 104925942 104927069 -148329514 + L1MD2 LINE L1 5372 6545 -15 * 207 0 0 0 chr2 104927077 104927100 -148329483 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 1598 133 48 27 chr2 104927819 104928127 -148328456 + L1MA7 LINE L1 5956 6271 -20 571 294 156 18 chr2 104928303 104928578 -148328005 - MLT1I LTR MaLR -96 313 1 664 274 104 19 chr2 104928878 104929090 -148327493 + MIR SINE MIR 23 252 -10 1750 251 161 14 chr2 104929259 104929985 -148326598 + L1ME1 LINE L1 5279 6156 -10 2148 88 0 10 chr2 104929999 104930296 -148326287 + AluSq SINE Alu 1 294 -19 2472 166 64 11 chr2 104931773 104932243 -148324340 - L1MC1 LINE L1 -1 6332 5838 4518 167 39 48 chr2 104933487 104934631 -148321952 - L1MB7 LINE L1 -16 6168 5049 2201 92 20 0 chr2 104934631 104934935 -148321648 - AluY SINE Alu -1 310 1 4518 167 39 48 chr2 104934935 104935074 -148321509 - L1MB7 LINE L1 -1135 5049 4910 663 239 131 16 chr2 104935085 104935397 -148321186 - L1ME3A LINE L1 0 6170 5794 501 262 93 65 chr2 104936506 104936613 -148319970 - MIR SINE MIR 0 262 159 1932 143 0 3 chr2 104936613 104936906 -148319677 - AluSx SINE Alu -20 292 1 501 262 93 65 chr2 104936906 104937046 -148319537 - MIR SINE MIR -103 159 8 532 171 9 27 chr2 104937144 104937255 -148319328 + MER5B DNA MER1_type 4 112 -66 660 190 35 35 chr2 104937263 104937405 -148319178 - MER63A DNA MER1_type -23 187 46 203 284 54 27 chr2 104937416 104937490 -148319093 - MER5A DNA MER1_type -78 111 36 * 397 171 29 0 chr2 104937441 104937511 -148319072 + MER5B DNA MER1_type 104 175 -3 2273 80 7 0 chr2 104939185 104939485 -148317098 - AluY SINE Alu -9 302 1 784 174 230 0 chr2 104943572 104943750 -148312833 - MER20 DNA MER1_type 0 219 1 2214 99 7 3 chr2 104944399 104944702 -148311881 + AluSx SINE Alu 1 304 -8 292 253 12 48 chr2 104944745 104944828 -148311755 + L2 LINE L2 3234 3313 0 222 218 36 0 chr2 104946198 104946253 -148310330 + CT-rich Low_complexity Low_complexity 4 60 0 1899 129 3 10 chr2 104946808 104947102 -148309481 + AluSx SINE Alu 3 294 -18 239 320 113 56 chr2 104947106 104947337 -148309246 + L2 LINE L2 3028 3271 -1 2210 76 0 10 chr2 104947389 104947690 -148308893 - AluY SINE Alu -13 298 1 249 311 39 0 chr2 104947727 104947830 -148308753 + L1ME LINE L1 5713 5819 -302 2225 84 3 3 chr2 104948399 104948696 -148307887 + AluY SINE Alu 1 297 -14 392 281 51 71 chr2 104948821 104949074 -148307509 + HAL1b LINE L1 109 356 -992 1774 137 4 0 chr2 104949792 104950063 -148306520 + AluSx SINE Alu 11 282 -30 222 37 0 0 chr2 104950063 104950090 -148306493 + (TTAA)n Simple_repeat Simple_repeat 2 28 0 224 264 0 19 chr2 104950724 104950777 -148305806 + G-rich Low_complexity Low_complexity 2 53 0 1705 168 32 7 chr2 104952930 104953240 -148303343 - L1MB3 LINE L1 -274 5909 5592 21 0 0 0 chr2 104953271 104953292 -148303291 + AT_rich Low_complexity Low_complexity 1 21 0 1956 94 0 4 chr2 104953517 104953784 -148302799 + AluSg SINE Alu 1 266 -44 2118 132 38 11 chr2 104953885 104954255 -148302328 + L1MB3 LINE L1 5803 6182 -1 1963 73 8 0 chr2 104954300 104954559 -148302024 + AluY SINE Alu 41 301 -10 1856 88 8 4 chr2 104954722 104954982 -148301601 + AluSp SINE Alu 53 313 0 2118 111 7 0 chr2 104955481 104955787 -148300796 + AluSx SINE Alu 1 308 -4 345 335 87 14 chr2 104955922 104956140 -148300443 - MIR SINE MIR -20 242 9 1684 219 119 15 chr2 104956308 104956770 -148299813 - MER74A LTR ERVL -39 519 10 2044 144 0 0 chr2 104956770 104957082 -148299501 + AluSx SINE Alu 1 312 0 1700 114 11 22 chr2 104957247 104957519 -148299064 - AluSx SINE Alu 0 312 44 1625 171 4 4 chr2 104958287 104958592 -148297991 - AluJo SINE Alu 0 305 1 2107 159 5 30 chr2 104958593 104958964 -148297619 - L1PA16 LINE L1 -13 6153 5792 1617 64 20 20 chr2 104960037 104960287 -148296296 + AluY SINE Alu 5 254 -57 187 311 66 0 chr2 104962203 104962264 -148294319 - MIR SINE MIR -5 257 193 * 222 204 20 0 chr2 104962255 104962304 -148294279 + MIR SINE MIR 188 237 -25 * 840 227 74 5 chr2 104962285 104962488 -148294095 - MIR SINE MIR -33 229 13 1692 167 7 0 chr2 104962984 104963271 -148293312 + AluSx SINE Alu 4 292 -20 556 146 10 0 chr2 104963187 104963283 -148293300 + AluSg/x SINE Alu 206 302 -8 941 272 88 81 chr2 104964225 104965136 -148291447 - L1ME3A LINE L1 0 6170 5254 2087 166 99 2 chr2 104965172 104965606 -148290977 - LTR53 LTR ERVL -43 476 1 261 298 24 0 chr2 104965606 104965690 -148290893 - L1ME3A LINE L1 -903 5243 5158 182 320 48 64 chr2 104966645 104966770 -148289813 + L3b LINE CR1 1218 1340 -243 212 341 47 23 chr2 104966955 104967084 -148289499 + L2 LINE L2 3173 3304 -9 251 361 41 0 chr2 104967641 104967738 -148288845 - L2 LINE L2 -43 3229 3129 187 232 54 36 chr2 104967905 104967961 -148288622 - MIR SINE MIR -116 146 90 332 317 121 39 chr2 104968072 104968709 -148287874 - L2 LINE L2 -227 3045 2341 229 315 91 42 chr2 104972144 104972287 -148284296 - MER5A DNA MER1_type -39 150 1 3495 133 27 7 chr2 104972400 104972985 -148283598 + L1MB3 LINE L1 5585 6181 -2 2401 78 7 0 chr2 104972989 104973298 -148283285 + AluY SINE Alu 1 311 0 27 0 0 0 chr2 104973298 104973325 -148283258 + AT_rich Low_complexity Low_complexity 1 27 0 1738 115 59 21 chr2 104973325 104973611 -148282972 + Tigger1 DNA MER2_type 976 1272 -1146 2215 126 28 106 chr2 104973611 104973738 -148282845 + MSTB LTR MaLR 1 136 -290 2050 135 11 55 chr2 104973738 104974086 -148282497 + MER1B DNA MER1_type 5 337 0 2215 126 28 106 chr2 104974086 104974420 -148282163 + MSTB LTR MaLR 136 426 0 2085 74 20 13 chr2 104974420 104974718 -148281865 + Tigger1 DNA MER2_type 1268 1567 -851 2320 62 0 21 chr2 104975188 104975523 -148281060 - AluY SINE Alu 0 329 1 2377 98 0 0 chr2 104975868 104976164 -148280419 + AluSx SINE Alu 1 296 -16 5822 135 25 50 chr2 104976405 104976507 -148280076 - Tigger1 DNA MER2_type -1368 1050 947 2461 77 0 3 chr2 104976507 104976819 -148279764 - AluY SINE Alu 0 311 1 5822 135 25 50 chr2 104976819 104977793 -148278790 - Tigger1 DNA MER2_type -1471 947 1 635 233 29 118 chr2 104977993 104978307 -148278276 + L1MC4a LINE L1 6542 6827 -981 2220 93 28 3 chr2 104978340 104978631 -148277952 + AluSx SINE Alu 1 298 -14 2122 115 41 30 chr2 104978654 104979020 -148277563 + THE1C LTR MaLR 1 370 -5 413 285 30 33 chr2 104979255 104979563 -148277020 + L1MC4 LINE L1 6954 7215 -746 248 359 30 17 chr2 104979666 104979897 -148276686 + L1MC5 LINE L1 7262 7495 -466 3512 135 67 37 chr2 104979909 104980064 -148276519 + LTR8A LTR ERV1 1 150 -577 2053 118 154 37 chr2 104980064 104980241 -148276342 - MSTA LTR MaLR 0 428 273 2222 77 0 0 chr2 104980241 104980513 -148276070 - AluY SINE Alu -5 306 35 2249 50 0 0 chr2 104980513 104980771 -148275812 - AluY SINE Alu -53 258 1 2053 118 154 37 chr2 104980771 104980975 -148275608 - MSTA LTR MaLR -154 274 1 3512 135 67 37 chr2 104980975 104981525 -148275058 + LTR8A LTR ERV1 150 727 0 248 306 41 20 chr2 104981663 104981810 -148274773 + L1MC5 LINE L1 7645 7794 -167 180 111 0 0 chr2 104981939 104981966 -148274617 + (GAAAA)n Simple_repeat Simple_repeat 4 30 0 189 0 0 0 chr2 104981978 104981999 -148274584 + (A)n Simple_repeat Simple_repeat 1 21 0 254 246 0 49 chr2 104982424 104982485 -148274098 + MIR3 SINE MIR 124 181 -27 1569 176 32 35 chr2 104982589 104982902 -148273681 - AluJo SINE Alu 0 312 1 2662 46 0 3 chr2 104982905 104983210 -148273373 - AluY SINE Alu -7 304 1 1625 190 31 7 chr2 104984013 104984302 -148272281 - AluJb SINE Alu -16 296 1 2178 143 0 0 chr2 104985085 104985386 -148271197 + AluSx SINE Alu 3 303 -9 1827 195 13 13 chr2 104985792 104986181 -148270402 + L1MB3 LINE L1 5787 6175 -8 1697 146 33 57 chr2 104987853 104988154 -148268429 + AluJb SINE Alu 1 294 -18 1343 75 0 0 chr2 104989154 104989314 -148267269 + AluSx SINE Alu 1 160 -152 25 0 0 0 chr2 104991176 104991201 -148265382 + AT_rich Low_complexity Low_complexity 1 25 0 344 281 44 9 chr2 104991368 104991482 -148265101 - MER5B DNA MER1_type -4 174 57 1851 120 24 58 chr2 104992255 104992589 -148263994 - AluSx SINE Alu 0 324 1 677 248 69 25 chr2 104992677 104992879 -148263704 + MIR SINE MIR 46 256 -6 187 341 103 0 chr2 104994985 104995111 -148261472 - L2 LINE L2 -1 3271 3133 2210 116 0 22 chr2 104995459 104995770 -148260813 - AluSx SINE Alu -8 304 1 218 227 67 27 chr2 104995869 104995944 -148260639 + MER5A DNA MER1_type 4 81 -108 2143 79 72 0 chr2 104996122 104996399 -148260184 - AluY SINE Alu -14 297 1 2811 69 0 28 chr2 104998047 104998437 -148258146 - L1PA8 LINE L1 0 6172 5794 1461 215 24 0 chr2 104998483 104998771 -148257812 - MER7A DNA MER2_type 0 346 54 823 196 0 0 chr2 105000053 105000191 -148256392 + FRAM SINE Alu 29 166 -10 255 217 31 137 chr2 105000763 105000810 -148255773 - MER104 DNA Tc2 -1721 177 127 2254 113 3 19 chr2 105000810 105001120 -148255463 - AluSq SINE Alu -8 305 1 255 217 31 137 chr2 105001120 105001233 -148255350 - MER104 DNA Tc2 -1771 127 34 2364 81 7 0 chr2 105001902 105002199 -148254384 + AluSg SINE Alu 2 300 -10 257 256 37 12 chr2 105002244 105002326 -148254257 - MER5C DNA MER1_type -7 317 234 341 286 25 17 chr2 105002357 105002476 -148254107 - MER5C DNA MER1_type -200 124 5 2304 117 0 0 chr2 105002835 105003142 -148253441 - AluSx SINE Alu -5 307 1 729 252 127 46 chr2 105005050 105005531 -148251052 - MLT1G1 LTR MaLR -3 592 73 2150 95 16 9 chr2 105007010 105007326 -148249257 - L1PB2 LINE L1 0 6151 5834 258 32 0 0 chr2 105007522 105007553 -148249030 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 495 322 105 27 chr2 105007593 105007851 -148248732 - L2 LINE L2 -9 3263 2986 2298 89 3 52 chr2 105008502 105008829 -148247754 - AluSq SINE Alu -2 311 1 2287 96 0 37 chr2 105009446 105009770 -148246813 - AluSx SINE Alu 0 312 1 185 333 0 18 chr2 105009900 105009957 -148246626 + MIR SINE MIR 45 100 -108 200 0 100 0 chr2 105011971 105012001 -148244582 + T-rich Low_complexity Low_complexity 1 33 0 259 260 48 10 chr2 105013378 105013482 -148243101 + L1MC5 LINE L1 7796 7903 -58 686 139 24 0 chr2 105014113 105014278 -148242305 + (TCCA)n Simple_repeat Simple_repeat 2 170 0 226 273 0 0 chr2 105014278 105014344 -148242239 + CT-rich Low_complexity Low_complexity 3 68 0 196 328 151 42 chr2 105014350 105014469 -148242114 - L2 LINE L2 0 3272 3141 215 154 0 19 chr2 105014547 105014599 -148241984 + (TTCA)n Simple_repeat Simple_repeat 4 54 0 531 264 65 65 chr2 105014663 105014894 -148241689 - MIR SINE MIR -2 260 30 21 0 0 0 chr2 105015640 105015661 -148240922 + AT_rich Low_complexity Low_complexity 1 21 0 2033 133 3 0 chr2 105015932 105016234 -148240349 - AluSx SINE Alu -8 304 2 303 386 0 0 chr2 105016828 105016960 -148239623 + L2 LINE L2 3140 3271 -1 229 317 0 22 chr2 105017809 105017989 -148238594 + C-rich Low_complexity Low_complexity 5 180 0 203 294 88 0 chr2 105018246 105018314 -148238269 - L2 LINE L2 -56 3216 3143 954 270 175 12 chr2 105018615 105019015 -148237568 - L2 LINE L2 -2 3311 2847 234 224 10 102 chr2 105019014 105019112 -148237471 - L2 LINE L2 -5 3267 3179 * 187 304 71 125 chr2 105020759 105020943 -148235640 - MIR SINE MIR -56 206 33 1568 72 0 14 chr2 105021217 105021425 -148235158 + AluSx SINE Alu 1 205 -107 513 170 25 2 chr2 105021483 105021598 -148234985 + MSTA LTR MaLR 14 137 -238 551 196 45 89 chr2 105022129 105022241 -148234342 - L1M4 LINE L1 -881 5265 5162 2159 98 0 13 chr2 105022241 105022547 -148234036 - AluY SINE Alu -9 302 1 551 196 45 89 chr2 105022547 105022613 -148233970 - L1M4 LINE L1 -984 5162 5095 21 0 0 0 chr2 105025432 105025453 -148231130 + AT_rich Low_complexity Low_complexity 1 21 0 2010 122 3 3 chr2 105026402 105026706 -148229877 - AluSq SINE Alu -9 304 1 354 263 77 88 chr2 105028262 105028559 -148228024 - L1MC4 LINE L1 -980 7062 6769 2294 57 0 0 chr2 105029861 105030144 -148226439 + AluY SINE Alu 22 304 -7 403 208 38 38 chr2 105030542 105030648 -148225935 - HAL1 LINE L1 -1111 1396 1291 921 225 166 9 chr2 105030648 105030968 -148225615 + HAL1 LINE L1 1389 1758 -749 199 216 27 0 chr2 105031749 105031786 -148224797 - L3b LINE CR1 -102 1481 1444 245 309 117 43 chr2 105032251 105032413 -148224170 + L2 LINE L2 2503 2676 -638 581 77 0 0 chr2 105032628 105032726 -148223857 - AluSc SINE Alu 0 299 202 256 320 68 0 chr2 105032758 105032861 -148223722 + L2 LINE L2 3043 3152 -161 304 216 81 0 chr2 105033338 105033412 -148223171 + MER6 DNA MER2_type 782 861 -4 193 274 126 11 chr2 105033757 105033852 -148222731 - L2 LINE L2 -260 3053 2948 373 246 173 31 chr2 105033973 105034164 -148222419 + MER20 DNA MER1_type 2 219 0 1769 128 24 7 chr2 105034632 105034920 -148221663 - AluSq SINE Alu -15 298 6 807 214 28 42 chr2 105035159 105035444 -148221139 - AluSq SINE Alu -26 287 7 189 211 0 0 chr2 105036390 105036428 -148220155 + MER5B DNA MER1_type 141 178 0 1327 218 24 13 chr2 105038373 105038671 -148217912 + AluSp SINE Alu 1 301 -2 737 99 0 0 chr2 105038954 105039055 -148217528 + AluS SINE Alu 2 102 -211 2172 107 0 3 chr2 105039186 105039495 -148217088 - AluSx SINE Alu -4 308 1 694 308 84 47 chr2 105040212 105040452 -148216131 + L1MC4a LINE L1 5298 5528 -2280 2325 95 0 0 chr2 105040452 105040756 -148215827 - AluSq SINE Alu -9 304 1 694 308 84 47 chr2 105040756 105041191 -148215392 + L1MC4a LINE L1 5528 5998 -1810 1956 118 30 10 chr2 105041260 105041565 -148215018 - AluSx SINE Alu -1 311 1 186 43 0 0 chr2 105042236 105042259 -148214324 + (A)n Simple_repeat Simple_repeat 1 23 0 2404 41 0 17 chr2 105042651 105042943 -148213640 - AluY SINE Alu -12 299 13 2195 95 3 0 chr2 105043432 105043727 -148212856 + AluSg SINE Alu 1 296 -14 2733 191 75 29 chr2 105044888 105045542 -148211041 + L1MB8 LINE L1 5495 6178 0 6331 136 98 7 chr2 105047808 105048442 -148208141 - Tigger3b DNA MER2_type -1798 1230 655 7285 45 2 4 chr2 105048442 105049919 -148206664 + L1PA3 LINE L1 4679 6155 0 6331 136 98 7 chr2 105049919 105050410 -148206173 - Tigger3b DNA MER2_type -2373 655 3 2357 60 0 17 chr2 105052618 105052920 -148203663 + AluY SINE Alu 1 297 -14 21 0 0 0 chr2 105052971 105052992 -148203591 + AT_rich Low_complexity Low_complexity 1 21 0 327 107 27 40 chr2 105052999 105053074 -148203509 + L1MD3 LINE L1 7922 7995 0 215 31 31 0 chr2 105053156 105053188 -148203395 + (ATG)n Simple_repeat Simple_repeat 2 34 0 774 256 0 0 chr2 105053570 105053730 -148202853 + Tigger7 DNA MER2_type 108 267 -466 505 146 0 97 chr2 105053728 105053831 -148202752 + Tigger7 DNA MER2_type 2389 2481 -6 * 356 223 53 11 chr2 105054237 105054331 -148202252 + MER5A DNA MER1_type 85 182 -7 441 125 0 0 chr2 105055549 105055621 -148200962 - L1MB3 LINE L1 0 6183 6112 1526 122 4 8 chr2 105055692 105055929 -148200654 + AluSx SINE Alu 1 236 -76 193 229 100 14 chr2 105057758 105057828 -148198755 - MIR SINE MIR -93 169 94 2058 103 13 17 chr2 105059064 105059365 -148197218 + AluSx SINE Alu 1 300 -12 2492 218 91 17 chr2 105059886 105060982 -148195601 + L1ME2 LINE L1 4871 6049 -115 182 308 0 19 chr2 105061442 105061494 -148195089 + L2 LINE L2 2566 2616 -698 550 272 134 68 chr2 105061504 105062049 -148194534 - L1MEd LINE L1 -5527 592 12 1807 77 8 0 chr2 105063078 105063312 -148193271 - AluSc SINE Alu -17 292 57 2088 99 0 3 chr2 105063837 105064120 -148192463 + AluSx SINE Alu 1 282 -30 180 254 0 0 chr2 105064554 105064613 -148191970 + (TG)n Simple_repeat Simple_repeat 1 59 0 1898 192 55 0 chr2 105068763 105069200 -148187383 + L1MB3 LINE L1 5723 6183 0 670 140 9 9 chr2 105069316 105069430 -148187153 + FLAM_C SINE Alu 25 138 -5 2373 103 0 0 chr2 105070415 105070725 -148185858 - AluSx SINE Alu -2 310 1 3602 158 20 28 chr2 105070993 105071678 -148184905 + L1MB7 LINE L1 5489 6168 -16 191 247 14 27 chr2 105071680 105071698 -148184885 + MIR SINE MIR 191 208 -54 1994 139 3 3 chr2 105071698 105071992 -148184591 + AluJb SINE Alu 1 294 -18 191 247 14 27 chr2 105071992 105072046 -148184537 + MIR SINE MIR 208 262 0 22 0 0 0 chr2 105072052 105072074 -148184509 + AT_rich Low_complexity Low_complexity 1 22 0 2370 95 7 0 chr2 105073615 105073920 -148182663 + AluSq SINE Alu 1 307 -6 1941 113 53 0 chr2 105074707 105074989 -148181594 - AluSg SINE Alu -13 297 1 718 90 27 18 chr2 105075404 105075515 -148181068 - AluY SINE Alu -198 113 2 4114 108 7 13 chr2 105076153 105076755 -148179828 - L1PA13 LINE L1 -19 6144 5547 2173 114 1 11 chr2 105076757 105077249 -148179334 + L1PA13 LINE L1 5054 5542 -619 1430 124 0 0 chr2 105077869 105078063 -148178520 - AluSg/x SINE Alu -15 297 104 192 235 41 92 chr2 105078502 105078600 -148177983 - L2 LINE L2 -213 3059 2967 183 232 14 58 chr2 105078972 105079041 -148177542 + L2 LINE L2 3188 3253 -19 224 300 9 73 chr2 105079911 105080021 -148176562 + MIR3 SINE MIR 11 113 -95 2583 71 3 0 chr2 105080063 105080371 -148176212 - AluSp SINE Alu -4 309 1 1953 124 39 3 chr2 105080499 105080782 -148175801 + AluSx SINE Alu 3 295 -17 827 175 7 0 chr2 105081242 105081379 -148175204 + FAM SINE Alu 26 163 -22 2425 49 31 0 chr2 105081596 105081884 -148174699 - AluY SINE Alu -14 297 1 1167 226 62 94 chr2 105082444 105082932 -148173651 + MER34B LTR ERV1 1 468 -97 2053 151 7 0 chr2 105082932 105083236 -148173347 + AluJb SINE Alu 1 306 -6 1167 226 62 94 chr2 105083236 105083331 -148173252 + MER34B LTR ERV1 468 565 0 2384 74 3 10 chr2 105084286 105084595 -148171988 - AluY SINE Alu -4 307 1 21 0 0 0 chr2 105084600 105084621 -148171962 + AT_rich Low_complexity Low_complexity 1 21 0 2414 68 3 0 chr2 105085047 105085340 -148171243 + AluY SINE Alu 1 294 -17 216 265 0 0 chr2 105086039 105086088 -148170495 + L2 LINE L2 3203 3251 -21 2210 128 0 0 chr2 105086294 105086599 -148169984 + AluSx SINE Alu 1 305 -7 2123 110 17 0 chr2 105088038 105088328 -148168255 - AluSg SINE Alu -15 295 1 259 176 0 39 chr2 105089241 105089292 -148167291 - MER112 DNA MER1_type -211 49 1 1555 201 50 12 chr2 105089466 105089809 -148166774 + MLT1B LTR MaLR 1 356 -34 468 254 21 75 chr2 105091264 105091390 -148165193 + L1MEc LINE L1 829 938 -5458 2079 109 7 14 chr2 105091390 105091703 -148164880 + AluSx SINE Alu 4 314 0 468 254 21 75 chr2 105091703 105091815 -148164768 + L1MEc LINE L1 938 1055 -5341 910 167 0 31 chr2 105091944 105092052 -148164531 - Tigger1 DNA MER2_type 0 2418 2315 2225 112 7 7 chr2 105092052 105092357 -148164226 + AluSg SINE Alu 1 305 -5 910 167 0 31 chr2 105092357 105092410 -148164173 - Tigger1 DNA MER2_type -103 2315 2262 5081 117 44 44 chr2 105092794 105093661 -148162922 - Tigger1 DNA MER2_type 0 2418 1552 2289 99 0 3 chr2 105094104 105094406 -148162177 + AluSq SINE Alu 1 301 -12 2086 115 21 0 chr2 105094406 105094692 -148161891 + AluSg SINE Alu 1 292 -18 2353 78 3 0 chr2 105094692 105095002 -148161581 + AluSp SINE Alu 1 311 0 1537 111 35 18 chr2 105095222 105095344 -148161239 + MER30 DNA MER1_type 1 130 -100 2226 113 7 0 chr2 105095344 105095645 -148160938 - AluSx SINE Alu -9 303 1 1537 111 35 18 chr2 105095645 105095748 -148160835 + MER30 DNA MER1_type 130 230 0 1510 242 109 35 chr2 105095773 105095916 -148160667 + HAL1b LINE L1 509 640 -708 2209 117 0 19 chr2 105095916 105096224 -148160359 + AluSp SINE Alu 1 302 -11 1510 242 109 35 chr2 105096224 105096821 -148159762 + HAL1b LINE L1 640 1304 -44 2160 96 31 3 chr2 105096854 105097146 -148159437 - AluSg SINE Alu -10 300 1 1608 163 32 11 chr2 105097150 105097432 -148159151 - AluJo SINE Alu -24 288 1 239 206 82 62 chr2 105097508 105097605 -148158978 + L1ME4a LINE L1 5966 6064 -57 713 150 38 30 chr2 105097628 105097761 -148158822 + AluSx SINE Alu 2 135 -178 23 0 0 0 chr2 105098481 105098504 -148158079 + AT_rich Low_complexity Low_complexity 1 23 0 509 184 9 0 chr2 105098531 105098645 -148157938 + G-rich Low_complexity Low_complexity 2 116 0 728 248 13 43 chr2 105099230 105099460 -148157123 + MIR SINE MIR 23 245 -17 2413 88 0 7 chr2 105099561 105099869 -148156714 + AluSq SINE Alu 1 306 -7 1729 175 3 3 chr2 105100004 105100295 -148156288 + AluJo SINE Alu 1 291 -21 2300 230 75 13 chr2 105100474 105101470 -148155113 - L1MC4 LINE L1 -149 7893 6960 2593 131 43 12 chr2 105101470 105101891 -148154692 + Tigger2a DNA MER2_type 1 434 0 234 105 0 0 chr2 105101901 105101939 -148154644 + (CATA)n Simple_repeat Simple_repeat 3 40 0 2300 230 75 13 chr2 105101939 105102115 -148154468 - L1MC4 LINE L1 -1090 6952 6483 1178 136 0 12 chr2 105102118 105102287 -148154296 + AluSx SINE Alu 127 293 -17 1681 146 56 0 chr2 105102287 105102554 -148154029 - AluSx SINE Alu -30 282 1 1410 227 36 78 chr2 105103313 105103817 -148152766 + L1MC3 LINE L1 3 348 -5697 3599 22 0 5 chr2 105103817 105104230 -148152353 - L1PA4 LINE L1 -8 6147 5737 1410 227 36 78 chr2 105104230 105104624 -148151959 + L1MC3 LINE L1 348 757 -5288 806 182 0 7 chr2 105104640 105104783 -148151800 - FLAM_C SINE Alu -1 142 1 2922 225 77 55 chr2 105104783 105106145 -148150438 + L1MC3 LINE L1 747 2334 -4411 1313 205 43 63 chr2 105106145 105106448 -148150135 + AluJo SINE Alu 1 297 -15 2922 225 77 55 chr2 105106448 105106682 -148149901 + L1MC3 LINE L1 2334 2561 -4184 1846 134 52 0 chr2 105106682 105106951 -148149632 + AluSq SINE Alu 11 293 -20 18621 106 6 11 chr2 105106952 105110569 -148146014 + L1PA8A LINE L1 2507 6104 -27 327 85 0 0 chr2 105110595 105110642 -148145941 + (GGGGA)n Simple_repeat Simple_repeat 5 51 0 728 192 40 152 chr2 105110646 105110733 -148145850 + L1MC3 LINE L1 2520 2615 -3949 2152 116 10 10 chr2 105110733 105111034 -148145549 + AluSx SINE Alu 1 301 -11 728 192 40 152 chr2 105111034 105111322 -148145261 + L1MC3 LINE L1 2615 2819 -3745 765 102 110 16 chr2 105111323 105111450 -148145133 + FLAM_C SINE Alu 2 140 -3 5115 209 54 50 chr2 105111452 105111945 -148144638 + L1MC3 LINE L1 3938 4428 -2136 2584 65 0 3 chr2 105111945 105112253 -148144330 - AluY SINE Alu -4 307 1 5115 209 54 50 chr2 105112253 105113295 -148143288 + L1MC3 LINE L1 4428 5464 -1100 2239 93 6 35 chr2 105113295 105113607 -148142976 + AluSq SINE Alu 1 303 -10 5115 209 54 50 chr2 105113607 105113955 -148142628 + L1MC3 LINE L1 5464 4818 -1746 1598 105 5 9 chr2 105113955 105114174 -148142409 + AluSg/x SINE Alu 82 299 -11 5115 209 54 50 chr2 105114174 105115167 -148141416 + L1MC3 LINE L1 4817 5805 -759 1422 184 0 25 chr2 105115167 105115411 -148141172 + Tigger5 DNA MER2_type 1 238 -2085 * 1586 113 8 8 chr2 105115397 105115636 -148140947 + Tigger5 DNA MER2_type 2083 2321 -2 943 197 11 0 chr2 105115637 105115820 -148140763 + L1MC3 LINE L1 6824 7008 -1195 1318 161 14 15 chr2 105115820 105116058 -148140525 + MLT2B3 LTR ERVL 1 228 -225 265 114 91 0 chr2 105116031 105116075 -148140508 + MLT2B1 LTR ERVL 473 520 0 * 1362 125 63 96 chr2 105116075 105116378 -148140205 + L1MC3 LINE L1 7004 7296 -907 680 153 51 0 chr2 105116359 105116477 -148140106 + L1MC3 LINE L1 7598 7721 -482 * 1042 152 18 0 chr2 105116477 105116642 -148139941 + FRAM SINE Alu 1 167 -9 193 29 59 0 chr2 105116642 105116676 -148139907 + (GGGGA)n Simple_repeat Simple_repeat 4 39 0 1636 139 116 10 chr2 105116676 105116977 -148139606 + L1MC3 LINE L1 7708 8040 -163 877 208 199 84 chr2 105116977 105117430 -148139153 - MLT1D LTR MaLR 0 505 1 830 184 0 36 chr2 105117430 105117598 -148138985 + L1MC3 LINE L1 8036 8197 -6 622 194 183 104 chr2 105118154 105118520 -148138063 - MLT1D LTR MaLR -110 395 1 830 184 0 36 chr2 105118520 105118688 -148137895 + L1MC3 LINE L1 8036 8197 -6 263 220 66 22 chr2 105119067 105119158 -148137425 + L1MC4 LINE L1 7857 7951 -91 2000 101 19 29 chr2 105120350 105120657 -148135926 + AluSq SINE Alu 1 304 -9 749 176 36 18 chr2 105121414 105121579 -148135004 + L1MB3 LINE L1 6016 6183 0 353 234 117 28 chr2 105122841 105122986 -148133597 - L1ME4a LINE L1 0 6121 5964 236 279 0 16 chr2 105124012 105124073 -148132510 + L2 LINE L2 3246 3305 -8 1876 161 0 0 chr2 105125123 105125415 -148131168 + AluSx SINE Alu 2 293 -19 420 278 56 14 chr2 105125973 105126117 -148130466 + MIR SINE MIR 43 192 -70 870 191 30 186 chr2 105126181 105126298 -148130285 + MLT1C LTR MaLR 21 155 -312 1981 132 3 3 chr2 105126298 105126594 -148129989 - AluSx SINE Alu -16 296 1 870 191 30 186 chr2 105126594 105126906 -148129677 + MLT1C LTR MaLR 155 428 -39 2346 59 3 7 chr2 105127222 105127527 -148129056 - AluY SINE Alu -7 304 1 189 0 0 0 chr2 105127527 105127548 -148129035 + (T)n Simple_repeat Simple_repeat 1 21 0 192 343 0 0 chr2 105127815 105127882 -148128701 - MER5B DNA MER1_type -62 116 50 1212 145 3 131 chr2 105127923 105128067 -148128516 + L1 LINE L1 4115 4276 -1870 2399 63 0 3 chr2 105128067 105128367 -148128216 + AluY SINE Alu 1 299 -12 1533 160 3 21 chr2 105128375 105128662 -148127921 + AluJb SINE Alu 1 282 -30 1212 145 3 131 chr2 105128662 105128805 -148127778 + L1 LINE L1 4283 4373 -1773 396 158 233 14 chr2 105129182 105129328 -148127255 - MER5B DNA MER1_type 0 178 1 193 270 0 0 chr2 105129549 105129586 -148126997 + MIR SINE MIR 117 153 -109 364 230 216 14 chr2 105129990 105130138 -148126445 - MER5B DNA MER1_type 0 178 1 229 315 166 11 chr2 105130943 105131124 -148125459 - MIR SINE MIR -5 257 49 1231 182 64 8 chr2 105131129 105131365 -148125218 - MLT1A1 LTR MaLR -116 249 1 2012 121 0 0 chr2 105131436 105131718 -148124865 + AluSx SINE Alu 1 282 -30 265 111 0 0 chr2 105131724 105131769 -148124814 - AluSc SINE Alu -1 298 254 9005 45 11 2 chr2 105131869 105132982 -148123601 - L1P LINE L1 -842 5304 4182 2142 100 7 0 chr2 105133083 105133382 -148123201 - AluSx SINE Alu -7 305 5 589 168 0 99 chr2 105133537 105133639 -148122944 + MER53 DNA DNA 1 83 -106 1882 105 7 17 chr2 105133639 105133934 -148122649 - AluSx SINE Alu -15 297 6 589 168 0 99 chr2 105133934 105133992 -148122591 + MER53 DNA DNA 83 145 -44 1001 178 21 0 chr2 105134374 105134565 -148122018 + AluSx SINE Alu 1 195 -117 809 154 15 8 chr2 105135004 105135134 -148121449 + FRAM SINE Alu 1 130 -46 853 148 0 0 chr2 105135152 105135287 -148121296 - L1 LINE L1 -1895 4251 4117 449 248 26 130 chr2 105135682 105135952 -148120631 - MER21B LTR ERV1 -406 457 216 205 162 0 0 chr2 105137316 105137353 -148119230 + (CA)n Simple_repeat Simple_repeat 2 38 0 1910 168 70 48 chr2 105137879 105138296 -148118287 - MSTB LTR MaLR 0 426 1 2088 125 0 3 chr2 105138967 105139278 -148117305 + AluSg SINE Alu 1 310 0 816 160 0 0 chr2 105139461 105139592 -148116991 - FRAM SINE Alu -23 153 23 219 216 102 57 chr2 105139636 105139724 -148116859 - MIR3 SINE MIR -32 176 85 228 336 60 47 chr2 105139839 105139988 -148116595 - MIR SINE MIR -8 254 104 2824 145 59 47 chr2 105140450 105141030 -148115553 + L1MB3 LINE L1 5590 6176 -7 1847 135 6 19 chr2 105141042 105141353 -148115230 - AluSx SINE Alu -5 307 1 2325 80 0 0 chr2 105141543 105141845 -148114738 + AluY SINE Alu 8 309 -2 267 271 35 24 chr2 105141881 105141966 -148114617 + MIR3 SINE MIR 90 175 -33 401 216 69 52 chr2 105142625 105142741 -148113842 + L2 LINE L2 3189 3306 -7 207 0 0 0 chr2 105142971 105142994 -148113589 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 747 181 0 0 chr2 105142998 105143114 -148113469 - FLAM_A SINE Alu -17 116 1 2143 74 10 10 chr2 105143143 105143439 -148113144 + AluSp SINE Alu 1 296 -17 2225 96 0 3 chr2 105143445 105143747 -148112836 + AluY SINE Alu 1 301 -10 407 259 87 99 chr2 105143965 105144459 -148112124 - L1MC4 LINE L1 0 8042 7555 1804 132 0 37 chr2 105144508 105144803 -148111780 - AluJo SINE Alu -19 293 10 1369 54 0 0 chr2 105144920 105145088 -148111495 + AluSg/x SINE Alu 131 298 -14 246 269 0 0 chr2 105145284 105145336 -148111247 + polypyrimidine Low_complexity Low_complexity 1 52 0 1623 189 40 3 chr2 105145336 105145637 -148110946 - MLT1A1 LTR MaLR 0 365 54 342 116 0 87 chr2 105145640 105145709 -148110874 - THE1C LTR MaLR 0 375 313 1563 130 81 45 chr2 105145811 105146119 -148110464 - THE1C LTR MaLR -56 319 1 252 140 18 53 chr2 105146119 105146176 -148110407 - MLT1A1 LTR MaLR -310 55 1 305 47 23 0 chr2 105146176 105146219 -148110364 + (TC)n Simple_repeat Simple_repeat 2 45 0 342 0 0 0 chr2 105146219 105146257 -148110326 + (CA)n Simple_repeat Simple_repeat 1 38 0 1479 219 34 48 chr2 105146444 105146823 -148109760 - MLT1A2 LTR MaLR 0 374 1 2395 68 0 0 chr2 105146913 105147221 -148109362 + AluSg SINE Alu 1 308 -2 2092 154 59 46 chr2 105147859 105147901 -148108682 + MSTB1 LTR MaLR 8 48 -384 1382 132 118 4 chr2 105147901 105148173 -148108410 - AluJb SINE Alu -9 303 1 2092 154 59 46 chr2 105148173 105148520 -148108063 + MSTB1 LTR MaLR 48 402 -30 21 0 0 0 chr2 105148838 105148859 -148107724 + AT_rich Low_complexity Low_complexity 1 21 0 2250 84 7 0 chr2 105149050 105149347 -148107236 - AluSp SINE Alu -7 306 8 2150 50 0 0 chr2 105149347 105149607 -148106976 - AluY SINE Alu -25 286 27 2338 118 129 3 chr2 105149907 105150287 -148106296 - MSTA LTR MaLR 0 428 1 2641 215 131 33 chr2 105150351 105151082 -148105501 - MER21B LTR ERV1 -60 803 1 180 184 26 0 chr2 105151659 105151697 -148104886 + L2 LINE L2 2325 2363 -951 376 288 20 34 chr2 105151700 105151846 -148104737 + L2 LINE L2 2925 3068 -245 1489 273 68 39 chr2 105152595 105152782 -148103801 - HAL1 LINE L1 -6 2501 2321 2118 110 7 0 chr2 105152782 105153082 -148103501 - AluSq SINE Alu -11 302 1 1489 273 68 39 chr2 105153082 105153586 -148102997 - HAL1 LINE L1 -186 2321 1790 231 36 0 0 chr2 105153824 105153852 -148102731 + (CA)n Simple_repeat Simple_repeat 1 28 0 331 295 44 16 chr2 105153869 105154081 -148102502 + L1ME3A LINE L1 5292 5511 -653 772 183 0 8 chr2 105154095 105154221 -148102362 - FLAM_A SINE Alu -8 125 1 405 227 182 9 chr2 105154314 105154424 -148102159 + MLT1I LTR MaLR 281 409 0 565 238 96 59 chr2 105154424 105154748 -148101835 + L1ME3A LINE L1 5622 5957 -213 2146 112 0 0 chr2 105155071 105155375 -148101208 - AluSg SINE Alu 0 310 7 1662 156 11 7 chr2 105155598 105155880 -148100703 - AluJo SINE Alu -28 284 2 237 333 80 7 chr2 105156161 105156299 -148100284 - L2 LINE L2 0 3313 3166 2213 87 3 7 chr2 105156675 105156984 -148099599 + AluSx SINE Alu 1 308 -4 391 165 0 0 chr2 105158099 105158164 -148098419 + L1M3 LINE L1 5517 5581 -595 212 345 58 75 chr2 105158166 105158340 -148098243 - MIR SINE MIR -89 173 3 2473 148 49 16 chr2 105158604 105159051 -148097532 - L1MA6 LINE L1 -5 6295 5834 500 122 0 122 chr2 105159052 105159150 -148097433 + AluJ/FLAM SINE Alu 2 87 -225 2915 152 25 68 chr2 105159150 105159754 -148096829 - L1MA6 LINE L1 -453 5847 5270 189 281 260 31 chr2 105160363 105160559 -148096024 - L2 LINE L2 0 3313 3073 208 314 102 8 chr2 105162234 105162352 -148094231 + MIR3 SINE MIR 71 199 -9 22 35 0 0 chr2 105162645 105162674 -148093909 + GC_rich Low_complexity Low_complexity 1 29 0 182 194 15 0 chr2 105162836 105162903 -148093680 + C-rich Low_complexity Low_complexity 3 70 0 220 250 113 40 chr2 105164035 105164159 -148092424 - L2 LINE L2 -3 3269 3137 680 243 111 33 chr2 105164354 105164597 -148091986 + MIR SINE MIR 1 262 0 553 250 58 17 chr2 105164763 105164935 -148091648 - LTR33 LTR ERVL -340 181 3 246 230 137 36 chr2 105164947 105164991 -148091592 + LTR33 LTR ERVL 367 405 -116 1648 188 25 50 chr2 105164991 105165391 -148091192 + MLT1B LTR MaLR 1 390 0 246 230 137 36 chr2 105165391 105165485 -148091098 + LTR33 LTR ERVL 405 519 -2 1580 171 7 14 chr2 105166401 105166693 -148089890 + AluJo SINE Alu 1 290 -22 1858 134 30 7 chr2 105166804 105167103 -148089480 - AluSx SINE Alu -5 307 2 2322 87 0 3 chr2 105167147 105167457 -148089126 - AluSx SINE Alu -3 309 1 1018 197 77 55 chr2 105167477 105167787 -148088796 + LTR37A LTR ERV1 110 426 0 2275 88 3 0 chr2 105167834 105168141 -148088442 + AluY SINE Alu 1 308 -3 890 110 0 29 chr2 105168176 105168312 -148088271 + FLAM_C SINE Alu 2 133 0 2013 127 10 0 chr2 105168340 105168647 -148087936 + AluSg SINE Alu 1 310 0 200 279 0 0 chr2 105169251 105169294 -148087289 + polypurine Low_complexity Low_complexity 6 48 0 2024 110 16 10 chr2 105169373 105169682 -148086901 - AluSx SINE Alu -1 311 1 23 33 0 0 chr2 105169793 105169823 -148086760 + AT_rich Low_complexity Low_complexity 1 30 0 1979 128 7 0 chr2 105170233 105170529 -148086054 + AluSx SINE Alu 1 298 -14 666 257 42 25 chr2 105170582 105170819 -148085764 - MIR SINE MIR -10 252 12 246 317 154 0 chr2 105170974 105171078 -148085505 + MIR SINE MIR 77 196 -66 335 99 25 62 chr2 105171515 105171547 -148085036 + L1MA2 LINE L1 6227 6259 -45 1547 186 0 24 chr2 105171547 105171843 -148084740 + AluJb SINE Alu 1 289 -23 335 99 25 62 chr2 105171843 105171891 -148084692 + L1MA2 LINE L1 6259 6304 0 2080 101 0 14 chr2 105172164 105172486 -148084097 - AluSg1 SINE Alu 0 309 1 1940 102 29 0 chr2 105172494 105172793 -148083790 - AluSx SINE Alu 0 307 1 1029 121 6 24 chr2 105172929 105173095 -148083488 - AluSg/x SINE Alu -16 294 132 189 0 0 0 chr2 105173650 105173671 -148082912 + (CA)n Simple_repeat Simple_repeat 2 22 0 2360 223 0 0 chr2 105174337 105174384 -148082199 + MSTB LTR MaLR 1 42 -390 2917 131 18 40 chr2 105174384 105174719 -148081864 + LTR45B LTR ERV1 3 344 -145 2224 101 0 3 chr2 105174719 105175026 -148081557 + AluSg SINE Alu 1 306 -4 2917 131 18 40 chr2 105175026 105175102 -148081481 + LTR45B LTR ERV1 344 404 -85 1855 141 3 10 chr2 105175102 105175399 -148081184 - AluSx SINE Alu -17 295 1 2917 131 18 40 chr2 105175399 105175484 -148081099 + LTR45B LTR ERV1 404 489 0 2360 223 0 0 chr2 105175484 105175831 -148080752 + MSTB LTR MaLR 42 390 -42 2225 112 0 3 chr2 105175831 105176144 -148080439 - AluSx SINE Alu 0 312 1 2360 223 0 0 chr2 105176144 105176190 -148080393 + MSTB LTR MaLR 390 430 -2 606 139 12 133 chr2 105176306 105176357 -148080226 - MER3 DNA MER1_type -4 205 149 1983 127 0 0 chr2 105176357 105176674 -148079909 - AluSx SINE Alu 0 317 1 606 139 12 133 chr2 105176674 105176786 -148079797 - MER3 DNA MER1_type -60 149 61 2018 90 7 10 chr2 105176941 105177231 -148079352 + AluSp SINE Alu 1 289 -24 922 213 50 0 chr2 105177460 105177700 -148078883 + AluSp SINE Alu 52 303 -10 2340 85 0 19 chr2 105177820 105178137 -148078446 - AluY SINE Alu 0 311 1 496 229 39 73 chr2 105178308 105178487 -148078096 + HAL1 LINE L1 10 182 -2325 870 142 0 8 chr2 105178636 105178770 -148077813 + FLAM_C SINE Alu 1 133 0 2733 121 34 2 chr2 105178848 105179263 -148077320 + MSTA LTR MaLR 1 428 0 7514 187 48 15 chr2 105179265 105180792 -148075791 + MSTA-int LTR MaLR 3 1580 0 1226 132 26 0 chr2 105180792 105180982 -148075601 + MSTA LTR MaLR 1 195 -233 1973 97 0 0 chr2 105180989 105181248 -148075335 - AluSx SINE Alu -53 259 1 2343 111 9 20 chr2 105181248 105181591 -148074992 + THE1B LTR MaLR 26 364 0 12163 87 4 1 chr2 105181591 105183167 -148073416 + THE1B-int LTR MaLR 1 1580 0 2024 128 10 116 chr2 105183167 105183574 -148073009 + THE1B LTR MaLR 1 364 0 625 147 0 0 chr2 105183576 105183671 -148072912 + MSTA LTR MaLR 334 428 0 2061 221 52 136 chr2 105183672 105184196 -148072387 + HAL1 LINE L1 664 1231 -1276 517 126 23 0 chr2 105184196 105184283 -148072300 + AluS SINE Alu 223 311 -1 2061 221 52 136 chr2 105184283 105184521 -148072062 + HAL1 LINE L1 1231 1487 -1020 1269 172 15 103 chr2 105184521 105184689 -148071894 + AluJb SINE Alu 1 127 -185 2230 96 0 0 chr2 105184689 105184982 -148071601 + AluSc SINE Alu 1 293 -16 1269 172 15 103 chr2 105184982 105185144 -148071439 + AluJb SINE Alu 127 302 -10 2061 221 52 136 chr2 105185144 105185312 -148071271 + HAL1 LINE L1 1487 1668 -839 1681 191 0 3 chr2 105185312 105185610 -148070973 + AluJo SINE Alu 1 297 -15 2061 221 52 136 chr2 105185610 105185944 -148070639 + HAL1 LINE L1 1668 1902 -605 2000 127 0 3 chr2 105186150 105186441 -148070142 - AluJb SINE Alu -22 290 1 4047 78 0 4 chr2 105186578 105187091 -148069492 - MER9 LTR ERVK 0 511 1 1969 165 3 56 chr2 105187353 105187493 -148069090 + MLT1A1 LTR MaLR 9 155 -210 2097 121 13 0 chr2 105187493 105187800 -148068783 - AluSx SINE Alu -1 311 1 1969 165 3 56 chr2 105187800 105188034 -148068549 + MLT1A1 LTR MaLR 155 363 -2 796 175 93 43 chr2 105188154 105188411 -148068172 + LTR37B LTR ERV1 199 468 0 4010 133 32 5 chr2 105188580 105189198 -148067385 - MER41B LTR ERV1 0 635 1 2161 139 25 33 chr2 105189396 105189763 -148066820 - LTR26B LTR ERV1 0 531 168 830 199 6 0 chr2 105189763 105189919 -148066664 + AluJ SINE Alu 1 157 -155 780 115 0 0 chr2 105189919 105190023 -148066560 - LTR7 LTR ERV1 0 450 347 971 185 33 14 chr2 105190030 105190241 -148066342 - HERVH LTR ERV1 -7498 215 1 1383 146 90 127 chr2 105190242 105190708 -148065875 - LTR7 LTR ERV1 -1 449 1 822 150 14 7 chr2 105190708 105190848 -148065735 + AluJ SINE Alu 153 293 -19 404 136 0 0 chr2 105190849 105190908 -148065675 - LTR26E LTR ERV1 -362 260 202 2028 108 0 10 chr2 105190908 105191232 -148065351 - AluSp SINE Alu 0 321 1 560 159 159 16 chr2 105191239 105191365 -148065218 - MLT1B LTR MaLR -219 171 28 1771 140 10 17 chr2 105191368 105191668 -148064915 + AluJo SINE Alu 1 298 -14 333 0 0 0 chr2 105191901 105191938 -148064645 + (A)n Simple_repeat Simple_repeat 1 37 0 2207 120 0 0 chr2 105192279 105192588 -148063995 + AluSg SINE Alu 1 309 -1 5169 170 33 34 chr2 105192647 105193078 -148063505 - L1MB7 LINE L1 -5 6179 5749 2556 164 9 5 chr2 105193078 105193504 -148063079 - MSTA LTR MaLR 0 428 1 5169 170 33 34 chr2 105193504 105193765 -148062818 - L1MB7 LINE L1 -435 5749 5489 1455 134 54 115 chr2 105193765 105193944 -148062639 - AluJo SINE Alu -18 294 141 1625 151 0 4 chr2 105193944 105194203 -148062380 + AluSx SINE Alu 37 294 -18 1455 134 54 115 chr2 105194203 105194336 -148062247 - AluJo SINE Alu -171 141 1 5169 170 33 34 chr2 105194336 105194558 -148062025 - L1MB7 LINE L1 -695 5489 5268 1347 196 92 33 chr2 105194558 105194757 -148061826 - MLT1B LTR MaLR 0 390 204 2312 92 0 0 chr2 105194757 105195063 -148061520 - AluY SINE Alu -5 306 1 2107 109 13 0 chr2 105195063 105195366 -148061217 - AluSq SINE Alu -6 307 1 1347 196 92 33 chr2 105195366 105195533 -148061050 - MLT1B LTR MaLR -185 205 1 5169 170 33 34 chr2 105195533 105196066 -148060517 - L1MB7 LINE L1 -916 5268 4736 2188 76 3 3 chr2 105196066 105196357 -148060226 + AluY SINE Alu 1 291 -20 5169 170 33 34 chr2 105196357 105196717 -148059866 - L1MB7 LINE L1 -1448 4736 4377 864 140 7 29 chr2 105196750 105196886 -148059697 - FLAM_C SINE Alu 0 133 1 390 85 34 0 chr2 105197900 105197959 -148058624 - MER4E LTR ERV1 0 766 706 2066 176 81 25 chr2 105197962 105198395 -148058188 - LTR2B LTR ERV1 -3 487 31 4771 127 48 52 chr2 105198412 105199262 -148057321 - MER4D LTR ERV1 -56 847 1 2783 81 11 3 chr2 105199550 105199922 -148056661 + THE1C LTR MaLR 1 375 0 22 70 0 0 chr2 105200169 105200212 -148056371 + AT_rich Low_complexity Low_complexity 1 43 0 1453 188 0 0 chr2 105200214 105200469 -148056114 - AluJo SINE Alu -57 255 1 965 288 48 22 chr2 105200804 105201221 -148055362 + MLT1J1 LTR MaLR 4 431 -15 3867 159 76 5 chr2 105201311 105201953 -148054630 + MER21B LTR ERV1 1 688 -175 691 206 29 41 chr2 105201955 105202125 -148054458 - MER4D LTR ERV1 0 903 736 1967 139 0 3 chr2 105202226 105202521 -148054062 + AluSx SINE Alu 1 294 -18 324 0 0 0 chr2 105202521 105202557 -148054026 + (TA)n Simple_repeat Simple_repeat 2 37 0 209 189 0 0 chr2 105202679 105202716 -148053867 + C-rich Low_complexity Low_complexity 6 42 0 1436 189 20 10 chr2 105203471 105203777 -148052806 + AluJo SINE Alu 1 309 -3 259 82 0 41 chr2 105203780 105203829 -148052754 + (GAAA)n Simple_repeat Simple_repeat 3 49 0 1620 143 65 10 chr2 105203837 105204130 -148052453 - AluJb SINE Alu -3 309 1 2204 97 0 7 chr2 105204524 105204833 -148051750 - AluSc SINE Alu -2 307 1 1583 160 3 67 chr2 105205409 105205529 -148051054 + AluJo SINE Alu 1 127 -185 2335 70 3 3 chr2 105205529 105205829 -148050754 - AluY SINE Alu -11 300 1 1583 160 3 67 chr2 105205829 105206021 -148050562 + AluJo SINE Alu 127 293 -19 1054 134 6 0 chr2 105206129 105206293 -148050290 + AluSg/x SINE Alu 120 284 -28 235 191 73 0 chr2 105206604 105206672 -148049911 + MLT1K LTR MaLR 512 584 -4 363 163 193 59 chr2 105206873 105207008 -148049575 + L2 LINE L2 3159 3311 -2 703 144 0 32 chr2 105207072 105207197 -148049386 + FLAM_A SINE Alu 21 141 -1 2059 93 7 3 chr2 105207276 105207565 -148049018 + AluSx SINE Alu 5 294 -18 301 323 11 11 chr2 105207575 105207668 -148048915 - MIR3 SINE MIR -28 180 88 723 78 84 212 chr2 105207676 105207855 -148048728 + THE1B LTR MaLR 1 156 -208 1408 156 8 48 chr2 105207896 105208146 -148048437 + THE1B LTR MaLR 123 362 -2 449 95 0 0 chr2 105209489 105209552 -148047031 - MER92C LTR ERV1 0 554 492 376 168 6 204 chr2 105209667 105209834 -148046749 - MER92B LTR ERV1 -501 135 2 2460 50 0 3 chr2 105209996 105210299 -148046284 - AluY SINE Alu -9 302 1 1602 175 7 26 chr2 105210299 105210608 -148045975 - AluJo SINE Alu -9 303 1 781 150 8 0 chr2 105210613 105210733 -148045850 - FLAM_C SINE Alu -10 133 13 5034 163 12 30 chr2 105210798 105211665 -148044918 - L1MB7 LINE L1 -1 6183 5302 2071 127 0 13 chr2 105211665 105211981 -148044602 - AluSx SINE Alu 0 312 1 2371 84 0 0 chr2 105211985 105212296 -148044287 - AluY SINE Alu 0 311 1 5034 163 12 30 chr2 105212296 105212523 -148044060 - L1MB7 LINE L1 -885 5299 5099 621 242 68 53 chr2 105212620 105212884 -148043699 - MER93a LTR ERV1 0 402 135 1763 138 66 0 chr2 105212916 105213205 -148043378 + AluSx SINE Alu 2 309 -3 288 290 82 55 chr2 105213359 105213453 -148043130 - MLT1J2 LTR MaLR -262 188 98 2120 111 0 3 chr2 105213453 105213759 -148042824 - AluSq SINE Alu -8 305 1 288 290 82 55 chr2 105213759 105213847 -148042736 - MLT1J2 LTR MaLR -352 98 1 831 210 0 11 chr2 105215089 105215265 -148041318 + AluJb SINE Alu 137 310 -2 26 0 0 0 chr2 105215379 105215405 -148041178 + AT_rich Low_complexity Low_complexity 1 26 0 394 108 27 14 chr2 105215496 105215570 -148041013 + CT-rich Low_complexity Low_complexity 4 78 0 1985 120 7 7 chr2 105215573 105215881 -148040702 - AluSx SINE Alu -2 310 3 446 160 0 0 chr2 105216108 105216183 -148040400 + L1MB8 LINE L1 6098 6172 -6 1557 172 0 30 chr2 105216273 105216569 -148040014 - AluJo SINE Alu -20 292 6 2288 88 7 0 chr2 105216914 105217221 -148039362 - AluSx SINE Alu -3 309 1 1292 181 121 4 chr2 105217657 105217922 -148038661 + AluSp SINE Alu 5 300 -3 859 178 6 13 chr2 105217790 105217947 -148038636 + AluSx SINE Alu 3 158 -154 645 339 28 4 chr2 105218034 105218285 -148038298 - L2 LINE L2 -345 2969 2713 2245 91 3 14 chr2 105218494 105218791 -148037792 + AluSp SINE Alu 1 294 -19 2284 203 54 32 chr2 105218808 105218891 -148037692 - MER77 LTR ERV1 -4 601 521 1861 126 7 11 chr2 105218891 105219160 -148037423 - AluSx SINE Alu -15 297 30 2284 203 54 32 chr2 105219160 105219613 -148036970 - MER77 LTR ERV1 -84 521 53 2062 142 0 3 chr2 105219622 105219918 -148036665 - AluSx SINE Alu -17 295 1 317 250 98 18 chr2 105219984 105220096 -148036487 - L2 LINE L2 -602 2712 2592 242 189 0 0 chr2 105220122 105220175 -148036408 - MIR SINE MIR -26 236 184 6250 185 39 49 chr2 105220409 105222294 -148034289 - L1MA4 LINE L1 -14 6286 4449 2294 122 33 28 chr2 105222294 105222656 -148033927 + THE1B LTR MaLR 1 364 0 6250 185 39 49 chr2 105222656 105223562 -148033021 - L1MA4 LINE L1 -1851 4449 3536 2387 112 0 0 chr2 105223586 105223899 -148032684 - AluSq SINE Alu 0 313 1 2536 101 5 44 chr2 105224155 105224317 -148032266 + THE1C LTR MaLR 3 170 -205 2296 107 0 0 chr2 105224317 105224616 -148031967 - AluSc SINE Alu -10 299 1 2536 101 5 44 chr2 105224616 105224841 -148031742 + THE1C LTR MaLR 170 375 0 24 32 0 0 chr2 105224872 105224903 -148031680 + AT_rich Low_complexity Low_complexity 1 31 0 1146 140 10 70 chr2 105224910 105225110 -148031473 - AluJo SINE Alu -39 273 86 299 200 108 25 chr2 105225170 105225215 -148031368 + Charlie7 DNA MER1_type 2483 2523 -89 1759 104 43 127 chr2 105225215 105225380 -148031203 - MER46B DNA MER2_type -2496 235 244 1721 156 7 23 chr2 105225380 105225681 -148030902 - AluJo SINE Alu -5 307 12 1759 104 43 127 chr2 105225681 105225908 -148030675 - MER46B DNA MER2_type -2486 245 1 299 200 108 25 chr2 105225908 105225982 -148030601 + Charlie7 DNA MER1_type 2523 2612 0 187 353 35 17 chr2 105226190 105226306 -148030277 + L2 LINE L2 2472 2589 -725 680 301 152 28 chr2 105226427 105227005 -148029578 + HAL1 LINE L1 1684 2333 -174 256 294 15 0 chr2 105227017 105227085 -148029498 + MER5A DNA MER1_type 107 175 -14 477 182 136 76 chr2 105227400 105227532 -148029051 + AluJo SINE Alu 2 141 -171 2160 111 3 10 chr2 105227532 105227829 -148028754 + AluSx SINE Alu 1 295 -17 348 161 48 0 chr2 105227829 105227891 -148028692 + Charlie1 DNA MER1_type 2270 2334 -427 796 192 0 45 chr2 105227911 105228067 -148028516 + AluJo SINE Alu 124 272 -40 2070 126 10 10 chr2 105228167 105228468 -148028115 + AluSx SINE Alu 1 301 -11 700 184 46 141 chr2 105228473 105228756 -148027827 + L1MC3 LINE L1 2146 2401 -3745 765 102 110 16 chr2 105228757 105228884 -148027699 + FLAM_C SINE Alu 2 140 -3 5432 203 54 49 chr2 105228886 105229379 -148027204 + L1MC3 LINE L1 3520 4009 -2137 2584 65 0 3 chr2 105229379 105229687 -148026896 - AluY SINE Alu -4 307 1 5432 203 54 49 chr2 105229687 105230729 -148025854 + L1MC3 LINE L1 4009 5044 -1102 2225 93 6 35 chr2 105230729 105231040 -148025543 + AluSq SINE Alu 1 302 -11 5432 203 54 49 chr2 105231040 105231385 -148025198 + L1MC3 LINE L1 5044 4402 -1744 1598 105 5 9 chr2 105231385 105231604 -148024979 + AluSg/x SINE Alu 84 301 -11 5432 203 54 49 chr2 105231604 105232597 -148023986 + L1MC3 LINE L1 4401 5387 -759 1422 184 0 25 chr2 105232597 105232841 -148023742 + Tigger5 DNA MER2_type 1 238 -2085 * 1568 117 8 8 chr2 105232827 105233066 -148023517 + Tigger5 DNA MER2_type 2083 2321 -2 943 197 11 0 chr2 105233067 105233250 -148023333 + L1MC3 LINE L1 6406 6590 -1195 1336 157 14 15 chr2 105233250 105233488 -148023095 + MLT2B3 LTR ERVL 1 228 -225 265 114 91 0 chr2 105233461 105233505 -148023078 + MLT2B1 LTR ERVL 473 520 0 * 1358 125 63 96 chr2 105233505 105233808 -148022775 + L1MC3 LINE L1 6586 6878 -907 680 153 51 0 chr2 105233789 105233907 -148022676 + L1MC3 LINE L1 7180 7303 -482 * 1042 152 18 0 chr2 105233907 105234072 -148022511 + FRAM SINE Alu 1 167 -9 193 29 59 0 chr2 105234072 105234106 -148022477 + (GGGGA)n Simple_repeat Simple_repeat 4 39 0 1103 139 11 11 chr2 105234106 105234293 -148022290 + L1MC3 LINE L1 7290 7476 -309 231 108 54 0 chr2 105234400 105234437 -148022146 - MER58 DNA MER1_type -176 39 1 2079 107 0 35 chr2 105234465 105234775 -148021808 - AluSx SINE Alu -13 299 1 244 317 0 0 chr2 105235065 105235125 -148021458 - LTR33 LTR ERVL -157 364 305 370 302 101 6 chr2 105235153 105235332 -148021251 - LTR33 LTR ERVL -315 206 11 2630 45 0 7 chr2 105235730 105236039 -148020544 + AluY SINE Alu 1 307 -4 693 210 8 0 chr2 105236209 105236333 -148020250 + FLAM_A SINE Alu 1 125 -8 2465 84 0 3 chr2 105236705 105237013 -148019570 - AluSx SINE Alu -1 311 5 975 192 12 0 chr2 105237016 105237183 -148019400 + MER58B DNA MER1_type 171 339 -2 5694 155 60 117 chr2 105237193 105237505 -148019078 + Charlie1a DNA MER1_type 1 329 -2432 2521 95 0 11 chr2 105237505 105237854 -148018729 + L1PA10 LINE L1 5819 6163 -5 5694 155 60 117 chr2 105237854 105237886 -148018697 + Charlie1a DNA MER1_type 329 361 -2400 2380 74 0 3 chr2 105237886 105238214 -148018369 - AluSx SINE Alu 0 327 1 2134 109 0 7 chr2 105238219 105238539 -148018044 - AluSx SINE Alu 0 318 1 5694 155 60 117 chr2 105238539 105239176 -148017407 + Charlie1a DNA MER1_type 365 1036 -1725 2147 110 0 29 chr2 105239176 105239485 -148017098 + AluSx SINE Alu 1 300 -12 5694 155 60 117 chr2 105239485 105239720 -148016863 + Charlie1a DNA MER1_type 1036 1283 -1478 2269 113 0 10 chr2 105239720 105240030 -148016553 - AluSx SINE Alu -5 307 1 5694 155 60 117 chr2 105240030 105240078 -148016505 + Charlie1a DNA MER1_type 1283 1332 -1429 692 104 21 0 chr2 105240078 105240174 -148016409 - FRAM SINE Alu -25 151 54 5694 155 60 117 chr2 105240174 105240325 -148016258 + Charlie1a DNA MER1_type 1332 1437 -18 731 163 35 35 chr2 105240370 105240542 -148016041 - LTR45B LTR ERV1 0 489 318 375 195 161 25 chr2 105240606 105240724 -148015859 - LTR45 LTR ERV1 -391 134 1 317 244 178 15 chr2 105240870 105241005 -148015578 - MIR SINE MIR -85 177 21 1937 141 23 3 chr2 105241578 105241882 -148014701 + AluSx SINE Alu 1 310 -2 2346 116 36 28 chr2 105242029 105242390 -148014193 - THE1B LTR MaLR 0 364 1 2515 123 22 49 chr2 105242399 105242663 -148013920 + MER57B LTR ERV1 1 250 -184 2128 131 3 10 chr2 105242663 105242977 -148013606 - AluSq SINE Alu -1 312 1 2515 123 22 49 chr2 105242977 105243158 -148013425 + MER57B LTR ERV1 250 434 0 184 248 80 26 chr2 105243184 105243297 -148013286 + L2 LINE L2 3142 3260 -12 2417 103 0 0 chr2 105243443 105243755 -148012828 + AluSx SINE Alu 1 312 0 1904 156 0 26 chr2 105244421 105244729 -148011854 - AluJo SINE Alu -12 300 1 1632 184 67 71 chr2 105244775 105245253 -148011330 - L1MD1 LINE L1 0 6242 5767 751 267 81 17 chr2 105245249 105245545 -148011038 - L1ME4a LINE L1 -279 5842 5528 * 1729 118 60 110 chr2 105245810 105245978 -148010605 - MLT1B LTR MaLR -10 380 205 2425 92 0 13 chr2 105245978 105246293 -148010290 - AluY SINE Alu 0 311 1 1729 118 60 110 chr2 105246293 105246327 -148010256 - MLT1B LTR MaLR -185 205 171 2420 110 21 19 chr2 105246327 105246701 -148009882 - THE1C LTR MaLR 0 375 1 1729 118 60 110 chr2 105246701 105246897 -148009686 - MLT1B LTR MaLR -219 171 1 1639 222 98 25 chr2 105247786 105248345 -148008238 + L1ME LINE L1 5208 5803 -367 680 229 107 5 chr2 105248354 105248559 -148008024 - MLT1C LTR MaLR -31 436 211 255 125 0 0 chr2 105248605 105248645 -148007938 + (TTTC)n Simple_repeat Simple_repeat 3 42 0 1985 118 3 100 chr2 105248645 105249025 -148007558 - MLT1B LTR MaLR -46 344 2 903 176 24 6 chr2 105249027 105249192 -148007391 - MLT1B-int LTR MaLR -1 1370 1203 3128 134 81 54 chr2 105249430 105249854 -148006729 - LTR9 LTR ERV1 0 612 201 2068 85 88 4 chr2 105249854 105250126 -148006457 + AluSc SINE Alu 7 301 -8 3128 134 81 54 chr2 105250126 105250226 -148006357 - LTR9 LTR ERV1 -411 201 105 1939 107 4 4 chr2 105250226 105250479 -148006104 + AluSx SINE Alu 1 253 -59 3128 134 81 54 chr2 105250479 105250549 -148006034 - LTR9 LTR ERV1 -507 105 1 1338 234 130 10 chr2 105250891 105251292 -148005291 - LTR2 LTR ERV1 0 449 1 534 202 0 0 chr2 105251372 105251471 -148005112 + AluJb SINE Alu 2 100 -212 1617 132 21 0 chr2 105251471 105251714 -148004869 + MER41B LTR ERV1 4 251 -384 269 160 40 20 chr2 105251720 105251770 -148004813 + HERV17 LTR ERV1 999 1049 -7577 * 1964 94 0 25 chr2 105251757 105252187 -148004396 + HERV17 LTR ERV1 1275 1740 -5156 * 5552 112 7 0 chr2 105252185 105252954 -148003629 + HERV17 LTR ERV1 7626 8399 0 1322 120 167 9 chr2 105252954 105253187 -148003396 + LTR12 LTR ERV1 1 270 -444 359 174 157 52 chr2 105253187 105253302 -148003281 + LTR30 LTR ERV1 375 727 -67 620 161 0 0 chr2 105253302 105253395 -148003188 + LTR12 LTR ERV1 622 714 0 2644 120 16 3 chr2 105253395 105253779 -148002804 + MER41B LTR ERV1 247 635 0 1184 153 11 11 chr2 105253779 105253969 -148002614 + AluJb SINE Alu 94 283 -29 195 155 17 35 chr2 105253991 105254049 -148002534 + GA-rich Low_complexity Low_complexity 1 57 0 1604 162 0 106 chr2 105254073 105254412 -148002171 + AluJb SINE Alu 3 305 -7 1034 135 0 19 chr2 105254421 105254568 -148002015 + AluSx SINE Alu 1 146 -166 7071 66 26 0 chr2 105254568 105255442 -148001141 + MER11D LTR ERVK 1 897 0 6890 63 5 0 chr2 105255450 105256300 -148000283 + HERVK11D LTR ERVK 9 862 -6890 * 39908 37 5 1 chr2 105256284 105260964 -147995619 + HERVK11D LTR ERVK 3052 7752 0 7289 52 28 0 chr2 105260964 105261837 -147994746 + MER11D LTR ERVK 1 897 0 1113 133 6 0 chr2 105261839 105261997 -147994586 + AluSx SINE Alu 143 301 -11 1942 116 47 0 chr2 105262191 105262466 -147994117 + AluSx SINE Alu 14 301 -11 5117 72 3 19 chr2 105262508 105263107 -147993476 - PABL_A LTR ERV1 -1 659 71 2358 98 0 0 chr2 105263107 105263403 -147993180 + AluSc SINE Alu 1 296 -13 5117 72 3 19 chr2 105263403 105263473 -147993110 - PABL_A LTR ERV1 -589 71 1 438 324 35 7 chr2 105263621 105263766 -147992817 - MIR SINE MIR -93 169 21 2367 57 20 7 chr2 105263936 105264233 -147992350 + AluY SINE Alu 1 301 -10 342 94 0 19 chr2 105264265 105264318 -147992265 - AluJo SINE Alu -167 135 84 1654 117 0 0 chr2 105264502 105264725 -147991858 - AluSg/x SINE Alu -6 306 84 2106 109 10 7 chr2 105264726 105265019 -147991564 - AluSq SINE Alu -19 294 1 1237 191 72 93 chr2 105265428 105265888 -147990695 - LTR7 LTR ERV1 0 450 1 828 203 48 93 chr2 105266583 105266873 -147989710 + LTR9 LTR ERV1 80 356 -256 1678 120 16 12 chr2 105266881 105267131 -147989452 - AluSg SINE Alu -20 290 40 25 31 0 0 chr2 105267133 105267165 -147989418 + AT_rich Low_complexity Low_complexity 1 32 0 2078 108 17 3 chr2 105267359 105267646 -147988937 - AluSx SINE Alu -21 291 1 392 261 0 60 chr2 105267719 105267853 -147988730 + L1ME LINE L1 5532 5657 -464 * 774 103 64 64 chr2 105267851 105268007 -147988576 + L1PB2 LINE L1 5883 6038 -113 1987 96 113 8 chr2 105268007 105268370 -147988213 - LTR7 LTR ERV1 0 450 1 836 53 18 0 chr2 105268370 105268483 -147988100 + L1PB2 LINE L1 6034 6148 -3 24 32 0 0 chr2 105268541 105268572 -147988011 + AT_rich Low_complexity Low_complexity 1 31 0 318 220 265 38 chr2 105268685 105268817 -147987766 + MER5B DNA MER1_type 3 164 -14 746 159 94 0 chr2 105269050 105269188 -147987395 - AluJb SINE Alu -25 287 137 227 247 12 25 chr2 105269424 105269505 -147987078 + (CCCCG)n Simple_repeat Simple_repeat 2 81 0 21 71 0 0 chr2 105269836 105269878 -147986705 + GC_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr2 105270159 105270182 -147986401 + GC_rich Low_complexity Low_complexity 1 23 0 1328 137 4 72 chr2 105271329 105271578 -147985005 + AluJo SINE Alu 1 232 -80 410 250 0 0 chr2 105271842 105271930 -147984653 + MIR SINE MIR 101 188 -74 2528 48 0 0 chr2 105271944 105272237 -147984346 + AluY SINE Alu 1 293 -18 247 306 65 73 chr2 105272309 105272433 -147984150 - MER5B DNA MER1_type -48 130 8 2148 115 7 3 chr2 105272585 105272881 -147983702 + AluSx SINE Alu 1 297 -15 2490 66 0 3 chr2 105273497 105273800 -147982783 + AluY SINE Alu 1 302 -9 380 147 78 98 chr2 105273812 105273841 -147982742 - LTR19A LTR ERV1 0 486 458 2285 104 0 0 chr2 105273841 105274139 -147982444 + AluSq SINE Alu 1 298 -15 380 147 78 98 chr2 105274139 105274211 -147982372 - LTR19A LTR ERV1 -28 458 387 1679 198 148 22 chr2 105274338 105274833 -147981750 + L1M4 LINE L1 4810 5366 -780 1824 135 4 4 chr2 105274833 105275092 -147981491 + AluSq SINE Alu 1 259 -54 2066 106 7 14 chr2 105275677 105276004 -147980579 + AluSx SINE Alu 1 325 0 514 202 0 10 chr2 105276129 105276228 -147980355 + L1 LINE L1 4527 4624 -1522 981 161 58 6 chr2 105276228 105276402 -147980181 + AluSg/x SINE Alu 123 305 -7 1531 184 30 7 chr2 105276427 105276698 -147979885 + AluJb SINE Alu 6 282 -30 1049 192 15 5 chr2 105276729 105276932 -147979651 - L1M4 LINE L1 -1271 4875 4671 1637 185 0 37 chr2 105277321 105277618 -147978965 + AluJb SINE Alu 1 286 -26 37 52 0 0 chr2 105277838 105277896 -147978687 + AT_rich Low_complexity Low_complexity 1 58 0 348 303 171 13 chr2 105278396 105278624 -147977959 - L1MC/D LINE L1 -2291 5517 5254 895 269 127 35 chr2 105278837 105279402 -147977181 - L1ME3 LINE L1 -204 5958 5311 2628 52 0 7 chr2 105279402 105279711 -147976872 - AluY SINE Alu -2 309 3 895 269 127 35 chr2 105279711 105279730 -147976853 - L1ME3 LINE L1 -851 5311 5295 1070 212 30 0 chr2 105279755 105279958 -147976625 + MER6B DNA MER2_type 1 209 -1 2068 114 38 0 chr2 105280505 105280795 -147975788 + AluSx SINE Alu 1 301 -11 634 248 0 8 chr2 105280987 105281112 -147975471 - FLAM_A SINE Alu -9 124 1 32 0 0 0 chr2 105282643 105282675 -147973908 + AT_rich Low_complexity Low_complexity 1 32 0 1788 144 28 3 chr2 105282675 105282959 -147973624 - AluSx SINE Alu -21 291 1 2107 130 3 0 chr2 105284681 105284981 -147971602 - AluSx SINE Alu -6 306 6 313 248 211 0 chr2 105285328 105285437 -147971146 - MER94 DNA DNA -1 133 2 22 35 0 0 chr2 105286700 105286729 -147969854 + AT_rich Low_complexity Low_complexity 1 29 0 1420 234 102 5 chr2 105288360 105288754 -147967829 + MER82 DNA MER2_type 216 647 -6 1264 167 67 21 chr2 105288915 105289155 -147967428 + AluJo SINE Alu 1 251 -61 21 0 0 0 chr2 105289155 105289176 -147967407 + AT_rich Low_complexity Low_complexity 1 21 0 1862 161 16 3 chr2 105291023 105291327 -147965256 - AluJb SINE Alu -4 308 1 2270 92 3 29 chr2 105292333 105292648 -147963935 - AluSp SINE Alu -6 307 1 2514 75 0 0 chr2 105292665 105292971 -147963612 - AluY SINE Alu -5 306 1 2882 13 0 0 chr2 105292983 105293294 -147963289 - AluYa5 SINE Alu 0 311 1 40 37 0 0 chr2 105293614 105293668 -147962915 + AT_rich Low_complexity Low_complexity 1 54 0 2317 90 3 0 chr2 105294952 105295242 -147961341 - AluSq SINE Alu -22 291 1 1306 159 66 57 chr2 105295695 105295996 -147960587 - AluJb SINE Alu -8 304 1 1599 138 80 4 chr2 105296103 105296379 -147960204 - L1MA8 LINE L1 -6 6285 5989 202 282 106 35 chr2 105297107 105297192 -147959391 + L3 LINE CR1 1361 1451 -126 830 126 6 114 chr2 105297565 105297775 -147958808 + AluSg/x SINE Alu 137 328 0 265 254 85 32 chr2 105298171 105298360 -147958223 + L1M4 LINE L1 5193 5391 -755 1084 186 10 15 chr2 105298390 105298627 -147957956 + AluJo SINE Alu 87 322 0 1699 140 3 96 chr2 105299041 105299376 -147957207 - AluJo SINE Alu -8 304 1 265 235 61 126 chr2 105300687 105300917 -147955666 + L2 LINE L2 3019 3233 -39 23 33 0 0 chr2 105301315 105301345 -147955238 + AT_rich Low_complexity Low_complexity 1 30 0 1858 156 7 3 chr2 105301850 105302139 -147954444 + AluSx SINE Alu 1 290 -22 1892 153 0 10 chr2 105302462 105302750 -147953833 - AluSq SINE Alu -28 285 1 527 362 35 0 chr2 105302875 105303074 -147953509 + MIR SINE MIR 7 212 -50 263 353 0 0 chr2 105303244 105303329 -147953254 + MIR3 SINE MIR 117 201 -7 319 251 61 25 chr2 105304081 105304244 -147952339 + L1ME4a LINE L1 5951 6119 -2 232 308 38 4 chr2 105304351 105304526 -147952057 + MIR SINE MIR 23 262 0 2291 107 0 3 chr2 105304592 105304892 -147951691 + AluSq SINE Alu 1 299 -14 412 177 25 25 chr2 105305559 105305638 -147950945 - AluSg/x SINE Alu -22 288 210 494 132 0 0 chr2 105305738 105305806 -147950777 - AluSg/x SINE Alu -108 202 135 2095 104 59 3 chr2 105305875 105306163 -147950420 - AluSg SINE Alu -6 304 1 200 59 29 0 chr2 105307018 105307052 -147949531 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2269 93 0 13 chr2 105307069 105307370 -147949213 + AluSc SINE Alu 1 297 -12 813 157 0 0 chr2 105307370 105307485 -147949098 - AluJo/FLAM SINE Alu -196 116 2 2345 94 0 0 chr2 105307544 105307842 -147948741 + AluSc SINE Alu 1 298 -11 24 91 0 0 chr2 105308149 105308215 -147948368 + AT_rich Low_complexity Low_complexity 1 66 0 257 261 95 28 chr2 105308259 105308430 -147948153 + L1ME LINE L1 5325 5510 -611 25 0 0 0 chr2 105308777 105308802 -147947781 + AT_rich Low_complexity Low_complexity 1 25 0 2341 76 3 0 chr2 105308802 105309093 -147947490 - AluSg SINE Alu -18 292 1 969 136 0 0 chr2 105309095 105309227 -147947356 - AluJo/FLAM SINE Alu -170 132 1 2170 164 42 6 chr2 105309528 105309881 -147946702 - MER47A DNA MER2_type 0 366 1 2560 57 0 0 chr2 105310129 105310430 -147946153 + AluY SINE Alu 1 301 -10 180 77 0 0 chr2 105310617 105310643 -147945940 + (T)n Simple_repeat Simple_repeat 1 26 0 452 249 152 6 chr2 105311368 105311533 -147945050 + MER3 DNA MER1_type 10 198 -11 242 203 102 0 chr2 105311489 105311548 -147945035 - MER3 DNA MER1_type -105 104 40 * 284 93 23 0 chr2 105311866 105311909 -147944674 + MADE1 DNA Mariner 35 78 -2 2098 102 20 3 chr2 105313030 105313324 -147943259 + AluSg SINE Alu 1 299 -11 21 36 0 0 chr2 105313430 105313458 -147943125 + AT_rich Low_complexity Low_complexity 1 28 0 1265 222 132 0 chr2 105313516 105313782 -147942801 + AluJo SINE Alu 2 302 0 303 311 89 22 chr2 105313826 105313961 -147942622 + L1ME LINE L1 4054 4197 -1949 300 301 60 45 chr2 105314114 105314380 -147942203 + L1ME LINE L1 4747 5016 -1130 28 48 0 0 chr2 105314485 105314527 -147942056 + AT_rich Low_complexity Low_complexity 1 42 0 2244 110 0 0 chr2 105314571 105314870 -147941713 + AluSq SINE Alu 1 299 -14 1833 148 3 17 chr2 105314993 105315291 -147941292 - AluJo SINE Alu -7 305 12 304 93 0 0 chr2 105315313 105315356 -147941227 - L1MB7 LINE L1 -2 6182 6140 531 311 44 38 chr2 105315456 105315630 -147940953 - HAL1b LINE L1 -539 809 637 2232 104 0 10 chr2 105315630 105315937 -147940646 + AluSx SINE Alu 1 304 -8 531 311 44 38 chr2 105315937 105316289 -147940294 - HAL1b LINE L1 -711 637 280 777 154 0 0 chr2 105316532 105316642 -147939941 + FLAM_A SINE Alu 1 110 -32 713 146 0 0 chr2 105316642 105316752 -147939831 + MSTA LTR MaLR 1 110 -318 * 1265 209 62 4 chr2 105316751 105317024 -147939559 + LTR1B LTR ERV1 528 816 -10 1147 153 6 11 chr2 105317180 105317357 -147939226 + AluJo SINE Alu 9 184 -128 694 218 0 0 chr2 105317363 105317496 -147939087 + MLT1D LTR MaLR 373 505 0 2241 116 0 0 chr2 105317500 105317794 -147938789 - AluSx SINE Alu -18 294 1 21 0 0 0 chr2 105317936 105317957 -147938626 + AT_rich Low_complexity Low_complexity 1 21 0 1459 195 0 46 chr2 105317967 105318171 -147938412 - AluJb SINE Alu -4 308 96 315 0 0 0 chr2 105318171 105318206 -147938377 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2124 106 0 0 chr2 105318206 105318488 -147938095 - AluSc SINE Alu -27 282 1 1459 195 0 46 chr2 105318488 105318584 -147937999 - AluJb SINE Alu -214 98 21 467 289 47 52 chr2 105319231 105319463 -147937120 + L1ME LINE L1 5456 5686 -435 1894 146 27 14 chr2 105319467 105319762 -147936821 + AluSg SINE Alu 1 299 -11 2039 127 3 23 chr2 105320191 105320490 -147936093 + AluSx SINE Alu 6 298 -14 242 197 16 33 chr2 105320906 105320967 -147935616 - L1MC5 LINE L1 -48 7913 7854 781 146 0 36 chr2 105321867 105322004 -147934579 + FLAM_C SINE Alu 2 133 0 1706 132 86 0 chr2 105322666 105322923 -147933660 - AluJb SINE Alu -16 296 18 1671 193 3 6 chr2 105324032 105324343 -147932240 + AluJo SINE Alu 1 310 -2 1962 120 3 42 chr2 105324452 105324761 -147931822 - AluSx SINE Alu -15 297 1 1729 175 22 0 chr2 105325458 105325756 -147930827 + AluJb SINE Alu 4 307 0 2275 118 0 3 chr2 105326170 105326474 -147930109 - AluSg SINE Alu -7 303 1 584 115 177 26 chr2 105326897 105327010 -147929573 + MER20 DNA MER1_type 40 169 -50 181 56 28 28 chr2 105327050 105327086 -147929497 + (GGGAGA)n Simple_repeat Simple_repeat 5 40 0 274 290 57 40 chr2 105327097 105327248 -147929335 + MIR SINE MIR 55 214 -48 218 272 140 26 chr2 105327631 105327745 -147928838 + L3 LINE CR1 353 479 -1098 1776 140 34 3 chr2 105328522 105328814 -147927769 - AluJo SINE Alu -11 301 1 21 0 0 0 chr2 105329817 105329838 -147926745 + GC_rich Low_complexity Low_complexity 1 21 0 854 138 26 97 chr2 105330423 105330618 -147925965 + AluJb SINE Alu 132 312 0 180 0 0 0 chr2 105331073 105331093 -147925490 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1853 90 90 0 chr2 105331093 105331349 -147925234 - AluSx SINE Alu -33 279 1 213 206 73 44 chr2 105331885 105331953 -147924630 + L2 LINE L2 3156 3225 -47 1404 225 56 48 chr2 105332388 105332468 -147924115 - L1MC5 LINE L1 -50 7911 7833 3344 141 13 15 chr2 105332468 105333000 -147923583 - LTR26B LTR ERV1 0 531 1 1404 225 56 48 chr2 105333000 105333076 -147923507 - L1MC5 LINE L1 -128 7833 7759 2808 130 19 54 chr2 105333076 105333560 -147923023 + LTR24 LTR ERV1 1 467 0 1404 225 56 48 chr2 105333560 105333921 -147922662 - L1MC5 LINE L1 -202 7759 7389 938 135 0 0 chr2 105334202 105334328 -147922255 - FAM SINE Alu -40 145 20 430 250 59 29 chr2 105334727 105334863 -147921720 - MER5A DNA MER1_type -3 186 47 28 0 0 0 chr2 105335415 105335443 -147921140 + AT_rich Low_complexity Low_complexity 1 28 0 1501 205 3 43 chr2 105335443 105335570 -147921013 + AluJo SINE Alu 1 132 -180 2278 93 7 0 chr2 105335570 105335860 -147920723 - AluSc SINE Alu -17 292 1 1501 205 3 43 chr2 105335860 105336034 -147920549 + AluJo SINE Alu 132 290 -22 873 75 9 0 chr2 105336135 105336241 -147920342 + AluSx SINE Alu 15 121 -191 1069 158 11 11 chr2 105336348 105336525 -147920058 + AluSx SINE Alu 116 292 -20 318 214 0 0 chr2 105337278 105337348 -147919235 - MER33 DNA MER1_type -4 359 290 37978 58 4 3 chr2 105337364 105342902 -147913681 + L1PA6 LINE L1 578 6154 0 945 173 108 24 chr2 105342903 105343029 -147913554 - MER33 DNA MER1_type -2315 270 156 2075 145 3 0 chr2 105343029 105343333 -147913250 - AluSx SINE Alu -7 305 1 945 173 108 24 chr2 105343333 105343455 -147913128 - MER33 DNA MER1_type -2429 156 1 2742 207 31 70 chr2 105344384 105344507 -147912076 - L1M4c LINE L1 -2734 3648 3522 2369 93 7 0 chr2 105344507 105344809 -147911774 - AluSq SINE Alu -9 304 1 2742 207 31 70 chr2 105344809 105345310 -147911273 - L1M4c LINE L1 -2860 3522 3068 1950 141 33 0 chr2 105345310 105345487 -147911096 - AluSx SINE Alu -3 309 116 189 0 0 0 chr2 105345487 105345508 -147911075 + (TG)n Simple_repeat Simple_repeat 2 22 0 1950 141 33 0 chr2 105345508 105345629 -147910954 - AluSx SINE Alu -196 116 1 2742 207 31 70 chr2 105345629 105345924 -147910659 - L1M4c LINE L1 -3314 3068 2763 2104 117 21 0 chr2 105345926 105346208 -147910375 - AluSx SINE Alu -22 290 3 303 163 0 88 chr2 105346242 105346322 -147910261 + L1M4 LINE L1 2461 2533 -3613 * 2204 245 21 53 chr2 105346311 105347335 -147909248 - L1M4c LINE L1 -4130 2433 1289 4392 133 47 10 chr2 105347337 105348044 -147908539 + L1MC1 LINE L1 5599 6331 -2 244 355 0 0 chr2 105348060 105348136 -147908447 + MER5C DNA MER1_type 1 76 -248 2412 97 3 0 chr2 105348773 105349083 -147907500 + AluSq SINE Alu 1 311 -2 195 324 152 19 chr2 105349339 105349549 -147907034 - L2 LINE L2 -903 2411 2174 785 299 66 16 chr2 105351372 105351690 -147904893 + LTR16B LTR ERVL 124 457 -7 691 187 117 6 chr2 105352713 105352884 -147903699 - MIR SINE MIR -6 256 67 213 333 146 0 chr2 105352904 105353000 -147903583 + L2 LINE L2 3187 3296 -17 21 36 0 0 chr2 105353136 105353164 -147903419 + AT_rich Low_complexity Low_complexity 1 28 0 313 217 57 85 chr2 105353450 105353556 -147903027 + HERVL LTR ERVL 3590 3692 -1962 2535 50 0 7 chr2 105353562 105353860 -147902723 - AluY SINE Alu -15 296 1 349 212 76 152 chr2 105354179 105354377 -147902206 + LTR50 LTR ERVL 1 183 -612 2040 147 0 3 chr2 105354450 105354743 -147901840 - AluSq SINE Alu -21 292 1 515 138 0 0 chr2 105355237 105355317 -147901266 + L1MB5 LINE L1 6078 6157 -17 1405 152 4 13 chr2 105455317 105455547 -147801036 + AluSg/x SINE Alu 85 312 0 2163 116 0 0 chr2 105455582 105455875 -147800708 + AluSx SINE Alu 2 294 -18 3654 153 19 14 chr2 105455876 105456499 -147800084 + L1MD1 LINE L1 5439 6064 -178 2370 102 0 6 chr2 105456528 105456841 -147799742 + AluSp SINE Alu 1 311 -2 273 311 0 19 chr2 105456880 105456986 -147799597 + L1MEc LINE L1 1234 1337 -5059 252 266 28 41 chr2 105457054 105457214 -147799369 + L1MEc LINE L1 1504 1664 -912 367 265 76 15 chr2 105457679 105457811 -147798772 + L1MEc LINE L1 2247 2386 -3829 4638 170 49 36 chr2 105457811 105458138 -147798445 + L1MB8 LINE L1 4564 4885 -1293 1868 177 0 7 chr2 105458138 105458448 -147798135 + AluJo SINE Alu 1 308 -4 4638 170 49 36 chr2 105458448 105458797 -147797786 + L1MB8 LINE L1 4885 5228 -950 2366 53 17 27 chr2 105458797 105459097 -147797486 - AluY SINE Alu -14 297 1 4638 170 49 36 chr2 105459097 105459942 -147796641 + L1MB8 LINE L1 5228 6107 -71 2070 144 116 38 chr2 105459942 105460339 -147796244 + MSTC LTR MaLR 1 428 0 4638 170 49 36 chr2 105460339 105460408 -147796175 + L1MB8 LINE L1 6107 6174 -4 1287 186 53 16 chr2 105460449 105460770 -147795813 + L1MB7 LINE L1 4980 5315 -849 2404 78 7 0 chr2 105460772 105461068 -147795515 - AluSp SINE Alu -15 298 1 3441 93 22 9 chr2 105461084 105461546 -147795037 - MER41A LTR ERV1 -86 468 1 13732 115 22 27 chr2 105461546 105462648 -147793935 - MER41A-int LTR ERV1 -2 6564 5458 2036 99 71 0 chr2 105462648 105462931 -147793652 - AluSg SINE Alu -6 304 2 13732 115 22 27 chr2 105462931 105463543 -147793040 - MER41A-int LTR ERV1 -1108 5458 4844 2289 104 7 0 chr2 105463543 105463840 -147792743 + AluSx SINE Alu 1 299 -13 13732 115 22 27 chr2 105463840 105464042 -147792541 - MER41A-int LTR ERV1 -1722 4844 4642 180 0 0 0 chr2 105464042 105464062 -147792521 + (CATTA)n Simple_repeat Simple_repeat 1 20 0 13732 115 22 27 chr2 105464062 105464143 -147792440 - MER41A-int LTR ERV1 -1924 4642 4562 2255 134 0 0 chr2 105464143 105464456 -147792127 - AluSq SINE Alu 0 313 1 13732 115 22 27 chr2 105464456 105464968 -147791615 - MER41A-int LTR ERV1 -2004 4562 4120 3299 120 33 11 chr2 105464955 105465663 -147790920 - MER41A-int LTR ERV1 -3010 2936 2169 * 918 123 13 26 chr2 105465661 105465815 -147790768 - MER41A-int LTR ERV1 -3929 2017 1866 * 3404 139 20 25 chr2 105465815 105466493 -147790090 - MER41A-int LTR ERV1 -4377 1452 635 * 5681 112 36 5 chr2 105466469 105467294 -147789289 - MER41B-int LTR ERV1 -5095 851 1 1108 113 0 0 chr2 105467385 105467545 -147789038 - MER41B LTR ERV1 0 635 476 3710 141 13 5 chr2 105467545 105467694 -147788889 + L1MB7 LINE L1 5327 5473 -711 234 0 0 0 chr2 105467694 105467720 -147788863 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1455 173 58 14 chr2 105467722 105467835 -147788748 + AluJb SINE Alu 3 110 -202 315 0 0 0 chr2 105467835 105467870 -147788713 + (CA)n Simple_repeat Simple_repeat 2 36 0 1455 173 58 14 chr2 105467870 105468034 -147788549 + AluJb SINE Alu 110 292 -20 3710 141 13 5 chr2 105468034 105468498 -147788085 + L1MB7 LINE L1 5473 5948 -236 1116 245 35 49 chr2 105468500 105468828 -147787755 + L1MD1 LINE L1 4520 4842 -1304 2312 103 7 0 chr2 105468828 105469120 -147787463 - AluSx SINE Alu -14 298 5 1116 245 35 49 chr2 105469120 105469223 -147787360 + L1MD1 LINE L1 4842 4945 -1201 2951 143 26 14 chr2 105469234 105469275 -147787308 - L1MA9 LINE L1 0 6312 6273 2005 124 7 3 chr2 105469275 105469565 -147787018 + AluSx SINE Alu 1 291 -21 2951 143 26 14 chr2 105469565 105470021 -147786562 - L1MA9 LINE L1 -39 6273 5809 1858 227 180 39 chr2 105470086 105470887 -147785696 - L1M3e LINE L1 -6104 926 13 2152 105 0 36 chr2 105470951 105471255 -147785328 + AluSx SINE Alu 3 295 -17 4601 169 19 35 chr2 105471285 105471759 -147784824 + L1MD1 LINE L1 4980 5460 -782 2260 101 0 0 chr2 105471759 105472057 -147784526 + AluSx SINE Alu 1 298 -14 4601 169 19 35 chr2 105472057 105472681 -147783902 + L1MD1 LINE L1 5460 6064 -178 560 130 0 96 chr2 105472681 105472710 -147783873 + L1MD2 LINE L1 6254 6284 -75 2303 117 0 0 chr2 105472710 105473010 -147783573 + AluSq SINE Alu 1 300 -13 560 130 0 96 chr2 105473010 105473096 -147783487 + L1MD2 LINE L1 6284 6359 0 383 119 68 0 chr2 105473122 105473181 -147783402 - Tigger6a DNA MER2_type -307 776 714 1078 173 0 0 chr2 105473186 105473359 -147783224 - AluJo/FRAM SINE Alu -7 305 133 1928 136 13 35 chr2 105473360 105473670 -147782913 - AluJo SINE Alu -9 303 1 3808 188 21 7 chr2 105473671 105474378 -147782205 - Tigger6a DNA MER2_type -366 717 1 1706 235 110 35 chr2 105474391 105474837 -147781746 - L1MEc LINE L1 -4360 2036 1528 2420 97 0 0 chr2 105474837 105475145 -147781438 + AluSx SINE Alu 1 308 -4 1706 235 110 35 chr2 105475145 105475327 -147781256 - L1MEc LINE L1 -4868 1528 1361 1561 167 50 33 chr2 105475330 105475629 -147780954 - AluJo SINE Alu -3 309 6 2153 118 0 26 chr2 105475922 105476228 -147780355 + AluY SINE Alu 1 298 -13 287 268 120 56 chr2 105476252 105476394 -147780189 + L2 LINE L2 2914 3064 -208 210 302 16 0 chr2 105476486 105476549 -147780034 + L2 LINE L2 3203 3266 -6 520 210 22 103 chr2 105476639 105476767 -147779816 - L1ME3A LINE L1 -8 6162 6058 2404 74 0 19 chr2 105476767 105477077 -147779506 + AluSx SINE Alu 1 304 -8 520 210 22 103 chr2 105477077 105477172 -147779411 - L1ME3A LINE L1 -112 6058 5957 2404 78 13 0 chr2 105477182 105477491 -147779092 - AluSp SINE Alu 0 313 1 837 294 22 0 chr2 105477577 105477808 -147778775 - MIR SINE MIR -2 260 25 732 135 127 159 chr2 105477985 105478229 -147778354 + MIR SINE MIR 9 246 -16 186 103 0 0 chr2 105478229 105478258 -147778325 + (TTCA)n Simple_repeat Simple_repeat 3 31 0 1252 236 46 78 chr2 105478261 105478905 -147777678 - L2 LINE L2 -22 3291 2628 2066 144 35 114 chr2 105478905 105479002 -147777581 + MLT1C LTR MaLR 1 104 -363 2277 75 0 7 chr2 105479002 105479282 -147777301 + AluSg SINE Alu 1 278 -32 1032 75 37 0 chr2 105479282 105479443 -147777140 + (GAAA)n Simple_repeat Simple_repeat 3 169 0 2066 144 35 114 chr2 105479443 105479851 -147776732 + MLT1C LTR MaLR 102 467 0 1252 236 46 78 chr2 105479851 105480047 -147776536 - L2 LINE L2 -685 2628 2478 332 125 34 11 chr2 105480087 105480105 -147776478 + (TA)n Simple_repeat Simple_repeat 2 18 -73 2229 108 3 3 chr2 105480105 105480401 -147776182 + AluSx SINE Alu 1 296 -16 332 125 34 11 chr2 105480401 105480470 -147776113 + (TA)n Simple_repeat Simple_repeat 18 91 0 265 282 12 35 chr2 105480545 105480630 -147775953 + MIR3 SINE MIR 74 156 -52 623 255 12 0 chr2 105481082 105481243 -147775340 - MIR SINE MIR 0 262 100 1999 118 3 30 chr2 105481319 105481623 -147774960 + AluSx SINE Alu 1 296 -16 2204 88 0 11 chr2 105482172 105482479 -147774104 - AluSx SINE Alu 0 304 1 2139 98 39 0 chr2 105482481 105482766 -147773817 - AluSx SINE Alu -16 296 1 2584 59 0 0 chr2 105484770 105485073 -147771510 - AluSg SINE Alu -7 303 1 277 155 17 17 chr2 105485563 105485621 -147770962 - L2 LINE L2 -2 3311 3254 228 257 71 0 chr2 105486189 105486259 -147770324 - MIR SINE MIR -71 191 117 1805 148 33 16 chr2 105487072 105487376 -147769207 - AluJo SINE Alu 0 312 4 340 202 149 11 chr2 105488757 105488851 -147767732 + MIR SINE MIR 19 125 -83 288 130 0 0 chr2 105488967 105489013 -147767570 + (TG)n Simple_repeat Simple_repeat 2 47 0 358 214 128 17 chr2 105489896 105490013 -147766570 + L1ME4a LINE L1 5964 6093 -28 311 308 0 0 chr2 105490946 105491037 -147765546 - MIR3 SINE MIR -3 205 115 270 0 0 0 chr2 105492407 105492437 -147764146 + (TG)n Simple_repeat Simple_repeat 2 31 0 348 264 207 0 chr2 105493305 105493445 -147763138 + MIR3 SINE MIR 31 199 -9 2191 101 24 0 chr2 105493522 105493701 -147762882 - AluSg SINE Alu -6 304 114 273 29 0 0 chr2 105493701 105493735 -147762848 + (TTTA)n Simple_repeat Simple_repeat 1 34 0 2191 101 24 0 chr2 105493735 105493852 -147762731 - AluSg SINE Alu -196 114 1 453 154 106 89 chr2 105494425 105494548 -147762035 - FLAM_A SINE Alu -8 125 1 2073 109 55 10 chr2 105494572 105494865 -147761718 - AluSx SINE Alu -6 306 1 1462 193 19 0 chr2 105495489 105495759 -147760824 - AluJo SINE Alu -37 275 1 198 91 0 0 chr2 105495778 105495811 -147760772 + (T)n Simple_repeat Simple_repeat 1 33 0 419 317 82 42 chr2 105495983 105496018 -147760565 - L2 LINE L2 -4 3268 3236 688 224 11 6 chr2 105496018 105496197 -147760386 + MER104 DNA MER2_type 1 180 0 419 317 82 42 chr2 105496197 105496467 -147760116 - L2 LINE L2 -36 3236 2951 2156 109 3 10 chr2 105496559 105496861 -147759722 - AluSx SINE Alu -12 300 1 406 200 22 11 chr2 105497190 105497280 -147759303 + MIR SINE MIR 55 145 -117 228 241 35 0 chr2 105598055 105598113 -147658470 + L2 LINE L2 3212 3271 -1 3484 147 91 10 chr2 105598477 105599209 -147657374 + L1MB5 LINE L1 5189 5987 -187 1210 137 5 10 chr2 105599627 105599831 -147656752 - AluJb SINE Alu -9 303 101 1652 131 11 4 chr2 105599894 105600161 -147656422 + AluSx SINE Alu 35 303 -9 2013 126 3 7 chr2 105602035 105602345 -147654238 - AluSq SINE Alu -4 309 1 1082 164 80 0 chr2 105602761 105602829 -147653754 - MER30 DNA MER1_type 0 230 169 1993 139 0 3 chr2 105602829 105603139 -147653444 - AluSx SINE Alu -3 309 1 1082 164 80 0 chr2 105603139 105603283 -147653300 - MER30 DNA MER1_type -61 169 1 2093 98 0 3 chr2 105603473 105603758 -147652825 + AluSq SINE Alu 1 284 -29 364 148 23 114 chr2 105603860 105603948 -147652635 - MER94 DNA DNA -53 81 2 1078 191 31 42 chr2 105604499 105604772 -147651811 + MLT1A1 LTR MaLR 1 264 -132 2073 138 93 33 chr2 105604776 105605196 -147651387 + L1MA4 LINE L1 5854 6298 -2 287 189 0 162 chr2 105605196 105605270 -147651313 + MLT1A1 LTR MaLR 228 291 -83 1771 195 18 3 chr2 105605370 105605698 -147650885 - MER68 LTR ERV1 -229 333 1 509 140 0 43 chr2 105605698 105605791 -147650792 + L1MB8 LINE L1 6077 6165 -13 654 279 43 13 chr2 105605799 105606032 -147650551 + L1M4 LINE L1 4598 4837 -1309 918 157 13 0 chr2 105606040 105606193 -147650390 + AluSp SINE Alu 142 296 -17 818 213 58 86 chr2 105606202 105606550 -147650033 + L1M4 LINE L1 4842 5179 -967 32 0 0 0 chr2 105607625 105607657 -147648926 + GC_rich Low_complexity Low_complexity 1 32 0 234 0 0 0 chr2 105608241 105608267 -147648316 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 541 286 45 58 chr2 105608760 105608984 -147647599 + MIR SINE MIR 16 236 -26 186 43 0 0 chr2 105609646 105609669 -147646914 + (TCC)n Simple_repeat Simple_repeat 2 24 0 1154 178 64 85 chr2 105610418 105610486 -147646097 - LTR37A LTR ERV1 0 426 358 2046 120 0 3 chr2 105610486 105610787 -147645796 + AluY SINE Alu 1 300 -11 1154 178 64 85 chr2 105610787 105611106 -147645477 - LTR37A LTR ERV1 -68 358 47 1747 150 17 3 chr2 105611414 105611708 -147644875 - AluJb SINE Alu -14 298 1 325 267 162 0 chr2 105611972 105612077 -147644506 + L2 LINE L2 3190 3311 -2 2086 130 0 0 chr2 105612129 105612428 -147644155 - AluSq SINE Alu -14 299 1 29 0 0 0 chr2 105612918 105612947 -147643636 + AT_rich Low_complexity Low_complexity 1 29 0 1709 157 0 24 chr2 105612950 105613243 -147643340 - AluJb SINE Alu -26 286 1 2369 78 0 3 chr2 105614121 105614427 -147642156 + AluSq SINE Alu 1 305 -8 1491 185 4 0 chr2 105614527 105614792 -147641791 + AluJo SINE Alu 1 266 -46 201 200 14 43 chr2 105615273 105615343 -147641240 + A-rich Low_complexity Low_complexity 4 71 0 1967 126 0 43 chr2 105615395 105615540 -147641043 + AluSx SINE Alu 1 151 -161 2117 96 3 26 chr2 105615540 105615842 -147640741 + AluSc SINE Alu 1 295 -14 1967 126 0 43 chr2 105615842 105616022 -147640561 + AluSx SINE Alu 151 312 0 1190 138 236 12 chr2 105616071 105616317 -147640266 + AluSg1 SINE Alu 1 301 -8 326 269 17 69 chr2 105616324 105616499 -147640084 - L1ME4a LINE L1 -133 5988 5823 7289 50 0 14 chr2 105616614 105617718 -147638865 - L1PA6 LINE L1 -3 6151 5060 2141 107 13 7 chr2 105617718 105618028 -147638555 - AluSq SINE Alu -1 312 1 7289 50 0 14 chr2 105618028 105618333 -147638250 - L1PA6 LINE L1 -1094 5060 4752 1301 171 28 20 chr2 105619069 105619321 -147637262 + AluJo SINE Alu 1 254 -58 996 136 0 0 chr2 105619367 105619543 -147637040 + (TA)n Simple_repeat Simple_repeat 1 176 0 744 177 120 23 chr2 105619756 105619931 -147636652 + MLT1C LTR MaLR 6 197 -270 872 118 0 15 chr2 105619932 105620067 -147636516 + FLAM_C SINE Alu 1 133 -10 1051 243 34 15 chr2 105620086 105620353 -147636230 + MLT1C LTR MaLR 189 460 -7 736 151 17 0 chr2 105622193 105622312 -147634271 - AluSp/q SINE Alu -9 304 184 197 308 103 19 chr2 105622472 105622692 -147633891 - L3 LINE CR1 -220 1357 1057 487 260 35 35 chr2 105623178 105623248 -147633335 - MER5B DNA MER1_type -5 173 104 188 65 0 32 chr2 105623248 105623279 -147633304 + (CACCC)n Simple_repeat Simple_repeat 3 32 0 487 260 35 35 chr2 105623279 105623381 -147633202 - MER5B DNA MER1_type -73 105 1 4331 129 79 48 chr2 105623771 105624036 -147632547 + L1MB3 LINE L1 5284 5539 -644 2210 73 0 3 chr2 105624036 105624325 -147632258 + AluSx SINE Alu 1 288 -24 4331 129 79 48 chr2 105624325 105624932 -147631651 + L1MB3 LINE L1 5539 6183 0 188 222 22 22 chr2 105625927 105625972 -147630611 - MIR SINE MIR -1 261 217 * 255 279 16 0 chr2 105625938 105625999 -147630584 - L2 LINE L2 -17 3255 3194 1908 145 3 0 chr2 105628655 105628958 -147627625 - AluSx SINE Alu -4 308 5 252 293 35 26 chr2 105629106 105629222 -147627361 - L2 LINE L2 -2 3270 3154 2814 3 0 0 chr2 105629898 105630209 -147626374 - AluY SINE Alu 0 311 1 199 182 0 0 chr2 105630455 105630488 -147626095 + L2 LINE L2 3267 3299 -14 648 216 95 58 chr2 105630552 105630793 -147625790 + L1MC5 LINE L1 7659 7908 -53 1000 130 0 88 chr2 105631039 105631231 -147625352 + AluJb SINE Alu 134 308 -4 1937 130 3 10 chr2 105631255 105631562 -147625021 + AluSx SINE Alu 1 305 -7 438 225 23 16 chr2 105631581 105631710 -147624873 - MER103 DNA DNA -34 132 3 192 311 0 0 chr2 105631752 105631813 -147624770 - MER5C DNA MER1_type -263 61 1 1555 169 23 78 chr2 105631917 105632302 -147624281 + MLT1A1 LTR MaLR 2 365 0 1779 89 0 85 chr2 105632620 105632913 -147623670 + AluSq SINE Alu 1 268 -45 362 272 54 0 chr2 105633592 105633684 -147622899 - MIR SINE MIR -87 175 79 1849 161 3 3 chr2 105633869 105634168 -147622415 + AluSx SINE Alu 1 299 -13 283 320 130 58 chr2 105634175 105634606 -147621977 + L2 LINE L2 2810 3271 -1 1076 129 0 43 chr2 105635421 105635607 -147620976 - AluJb SINE Alu -16 296 119 339 260 70 81 chr2 105635649 105635858 -147620725 - L1MEd LINE L1 -4822 1488 1278 2166 96 0 0 chr2 105635858 105636150 -147620433 - AluSg SINE Alu -18 292 1 339 260 70 81 chr2 105636150 105636213 -147620370 - L1MEd LINE L1 -5032 1278 1216 2051 113 0 0 chr2 105636213 105636518 -147620065 - AluSx SINE Alu 0 312 16 339 260 70 81 chr2 105636518 105636815 -147619768 - L1MEd LINE L1 -5094 1216 895 180 0 0 0 chr2 105636867 105636887 -147619696 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1655 196 20 15 chr2 105636913 105637255 -147619328 - L1MC2 LINE L1 -37 6307 5964 247 254 0 0 chr2 105637376 105637443 -147619140 - L1MEd LINE L1 -5290 829 763 3481 154 78 45 chr2 105637536 105638262 -147618321 - L1MB2 LINE L1 -1 6170 5421 380 383 22 11 chr2 105638263 105638446 -147618137 - L1MEd LINE L1 -5426 693 509 1521 156 23 50 chr2 105639246 105639547 -147617036 - AluJo SINE Alu -18 294 2 2252 96 0 0 chr2 105640317 105640618 -147615965 + AluSx SINE Alu 2 302 -10 2481 37 7 0 chr2 105641110 105641410 -147615173 + AluY SINE Alu 1 302 -9 1961 104 0 14 chr2 105642121 105642432 -147614151 - AluY SINE Alu 0 307 1 2011 88 25 0 chr2 105642432 105642706 -147613877 - AluSx SINE Alu -31 281 1 427 264 3 7 chr2 105643033 105643325 -147613258 + (CA)n Simple_repeat Simple_repeat 1 291 0 266 297 115 27 chr2 105646451 105646599 -147609984 - MIR SINE MIR -79 183 23 1770 155 7 29 chr2 105647135 105647444 -147609139 - AluSx SINE Alu -10 302 1 1700 188 57 23 chr2 105648020 105648372 -147608211 + MLT1A1 LTR MaLR 1 364 -1 399 300 59 90 chr2 105648492 105648882 -147607701 - L2 LINE L2 0 3272 2895 1848 160 3 7 chr2 105650063 105650370 -147606213 - AluJo SINE Alu -1 311 6 2232 84 0 7 chr2 105650761 105651059 -147605524 - AluSg1 SINE Alu -13 296 1 228 67 0 0 chr2 105651356 105651386 -147605197 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 446 236 0 0 chr2 105653953 105654059 -147602524 - L1MA9 LINE L1 -22 6290 6185 1056 178 23 10 chr2 105654059 105654285 -147602298 - L1MA9 LINE L1 -208 6092 5861 1974 99 4 0 chr2 105654776 105655048 -147601535 + AluSg SINE Alu 32 304 -6 268 328 17 14 chr2 105655770 105655950 -147600633 - L2 LINE L2 -478 2836 2610 707 135 41 0 chr2 105655988 105656158 -147600425 + (TCTA)n Simple_repeat Simple_repeat 4 180 0 1893 110 17 14 chr2 105656680 105656972 -147599611 + AluSx SINE Alu 1 293 -19 1925 95 0 35 chr2 105658192 105658477 -147598106 + AluSq SINE Alu 39 313 0 225 345 45 0 chr2 105658752 105658862 -147597721 - MIR3 SINE MIR -7 201 87 543 270 124 11 chr2 105659251 105659429 -147597154 - MIR SINE MIR -34 228 31 2599 204 44 107 chr2 105660332 105660371 -147596212 + L1MD2 LINE L1 5402 5442 -917 2331 89 0 3 chr2 105660371 105660684 -147595899 + AluSq SINE Alu 1 312 -1 2599 204 44 107 chr2 105660684 105661201 -147595382 + L1MD2 LINE L1 5442 5874 -485 1294 103 60 4 chr2 105661201 105661433 -147595150 + L1MA3 LINE L1 6060 6304 -1 2599 204 44 107 chr2 105661433 105661839 -147594744 + L1MD2 LINE L1 5874 6304 -55 183 80 0 0 chr2 105661853 105661878 -147594705 + (TTTTC)n Simple_repeat Simple_repeat 5 29 0 1403 177 39 35 chr2 105661880 105662191 -147594392 - AluJo SINE Alu 0 312 1 841 123 31 8 chr2 105662195 105662325 -147594258 - AluJo SINE Alu -178 134 2 317 125 31 0 chr2 105662325 105662389 -147594194 + L1MD2 LINE L1 6291 6356 -3 201 175 0 0 chr2 105663903 105663943 -147592640 + (TG)n Simple_repeat Simple_repeat 1 40 0 226 267 158 25 chr2 105665355 105665475 -147591108 + MIR SINE MIR 125 260 -2 363 335 23 26 chr2 105666226 105666382 -147590201 - MIR3 SINE MIR -20 188 23 430 315 93 19 chr2 105668155 105668317 -147588266 + L2 LINE L2 3097 3270 -2 443 82 14 0 chr2 105668319 105668392 -147588191 + (TGGA)n Simple_repeat Simple_repeat 3 76 0 1746 185 26 50 chr2 105668795 105669179 -147587404 - MLT1B LTR MaLR -15 375 1 1997 105 20 16 chr2 105670088 105670394 -147586189 - AluSc SINE Alu -2 307 1 293 361 78 15 chr2 105670547 105670752 -147585831 - L3 LINE CR1 -1043 534 317 344 295 0 9 chr2 105671326 105671438 -147585145 - L1ME4a LINE L1 -3 6118 6008 422 240 47 31 chr2 105672642 105672771 -147583812 + LTR33 LTR ERVL 389 519 -2 213 196 0 0 chr2 105672772 105672818 -147583765 + (CAGA)n Simple_repeat Simple_repeat 2 47 0 493 225 47 99 chr2 105672867 105673058 -147583525 + MIR SINE MIR 72 252 -10 378 222 167 63 chr2 105673061 105673187 -147583396 - L1ME4a LINE L1 -226 5895 5784 1487 177 7 24 chr2 105673187 105673481 -147583102 - AluJb SINE Alu -23 289 1 378 222 167 63 chr2 105673481 105673593 -147582990 - L1ME4a LINE L1 -337 5784 5632 2159 79 26 10 chr2 105674332 105674635 -147581948 - AluY SINE Alu 0 311 4 27820 92 6 14 chr2 105675248 105679775 -147576808 + L1P LINE L1 11 4519 -1627 2310 132 37 60 chr2 105679875 105680076 -147576507 + MSTB1 LTR MaLR 10 214 -218 1497 168 88 18 chr2 105680076 105680361 -147576222 + AluJo SINE Alu 3 307 -5 2310 132 37 60 chr2 105680361 105680592 -147575991 + MSTB1 LTR MaLR 214 432 0 30 45 0 0 chr2 105680621 105680665 -147575918 + AT_rich Low_complexity Low_complexity 1 44 0 2117 107 7 14 chr2 105680665 105680956 -147575627 - AluSx SINE Alu -23 289 1 209 278 174 0 chr2 105681596 105681711 -147574872 - MIR3 SINE MIR -25 183 49 38 22 0 0 chr2 105682634 105682679 -147573904 + GC_rich Low_complexity Low_complexity 1 45 0 32 0 0 0 chr2 105682894 105682926 -147573657 + GC_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr2 105682947 105682968 -147573615 + GC_rich Low_complexity Low_complexity 1 21 0 542 232 55 59 chr2 105683216 105683436 -147573147 + MIR SINE MIR 24 242 -20 1433 145 55 12 chr2 105683438 105683693 -147572890 + MER2 DNA MER2_type 1 266 -79 1090 149 0 6 chr2 105683693 105683861 -147572722 - AluJb SINE Alu -9 303 137 384 59 0 0 chr2 105684488 105684539 -147572044 + (TA)n Simple_repeat Simple_repeat 1 51 0 809 193 28 105 chr2 105684566 105684851 -147571732 - L1ME4a LINE L1 -580 5582 5320 2146 139 47 0 chr2 105684858 105685218 -147571365 - L1MB1 LINE L1 -7 6161 5785 1744 128 9 98 chr2 105685239 105685567 -147571016 - MER4A LTR ERV1 -6 658 360 1743 162 56 26 chr2 105685567 105685582 -147571001 - L1MB1 LINE L1 -377 5791 5778 1800 163 7 20 chr2 105685582 105685888 -147570695 - AluJo SINE Alu -10 302 1 1743 162 56 26 chr2 105685888 105686211 -147570372 - L1MB1 LINE L1 -390 5778 5443 405 0 0 0 chr2 105686221 105686266 -147570317 + (TTA)n Simple_repeat Simple_repeat 2 46 0 1425 194 54 25 chr2 105686279 105686558 -147570025 - AluJo SINE Alu -25 287 1 733 199 6 0 chr2 105686567 105686723 -147569860 - L1MB1 LINE L1 -1542 4604 4448 269 151 8 48 chr2 105686791 105686917 -147569666 + (TA)n Simple_repeat Simple_repeat 2 122 0 247 258 102 23 chr2 105686934 105687062 -147569521 + L2 LINE L2 1211 1348 -1966 * 371 265 143 58 chr2 105687050 105687132 -147569451 + L2 LINE L2 2996 3070 -243 2162 123 7 3 chr2 105687132 105687425 -147569158 + AluSx SINE Alu 1 294 -18 371 265 143 58 chr2 105687425 105687565 -147569018 + L2 LINE L2 3070 3237 -76 3972 154 36 26 chr2 105687566 105688142 -147568441 + MER39 LTR ERV1 7 593 -114 2325 130 119 8 chr2 105688142 105688527 -147568056 + MSTA LTR MaLR 1 428 0 3972 154 36 26 chr2 105688527 105688644 -147567939 + MER39 LTR ERV1 593 707 0 665 230 150 61 chr2 105689372 105689685 -147566898 + MLT1H LTR MaLR 209 549 0 1091 88 11 17 chr2 105690104 105690285 -147566298 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1823 147 4 7 chr2 105690287 105690566 -147566017 - AluJb SINE Alu -32 280 3 1850 150 21 3 chr2 105690681 105690967 -147565616 - AluJo SINE Alu -21 291 1 2342 192 135 12 chr2 105691129 105691691 -147564892 - MER73 LTR ERVL -13 631 1 2327 100 3 0 chr2 105693333 105693634 -147562949 - AluSq SINE Alu -11 302 1 407 291 187 6 chr2 105695100 105695282 -147561301 - MIR SINE MIR 0 262 48 421 270 11 87 chr2 105695383 105695560 -147561023 + MIR SINE MIR 12 174 -62 1726 141 80 39 chr2 105695690 105696052 -147560531 + MER31A LTR ERV1 1 377 -108 2372 105 0 3 chr2 105696157 105696470 -147560113 + AluSx SINE Alu 1 312 0 4074 238 80 47 chr2 105696470 105697577 -147559006 + MLT1A1-int LTR MaLR 244 1387 -348 1114 83 0 0 chr2 105697577 105697710 -147558873 + AluSq/x SINE Alu 1 133 -179 2959 164 14 2 chr2 105697717 105698205 -147558378 + Tigger3(Golem) DNA MER2_type 2536 3029 0 291 188 0 0 chr2 105698205 105698253 -147558330 + MLT1A1-int LTR MaLR 1688 1735 0 1058 181 73 119 chr2 105698253 105698623 -147557960 + MLT1A1 LTR MaLR 1 353 -12 234 0 0 0 chr2 105698707 105698733 -147557850 + (A)n Simple_repeat Simple_repeat 1 26 0 2285 115 3 3 chr2 105698834 105699146 -147557437 - AluJb SINE Alu 0 312 1 2135 130 0 0 chr2 105700391 105700690 -147555893 - AluSc SINE Alu -7 302 4 2433 92 0 0 chr2 105700695 105701001 -147555582 - AluSc SINE Alu -2 307 2 2258 94 0 10 chr2 105701679 105701977 -147554606 - AluSx SINE Alu -17 295 1 272 160 0 0 chr2 105701993 105702043 -147554540 - LTR37B LTR ERV1 0 468 419 2252 130 34 17 chr2 105702140 105702307 -147554276 - MLT1B LTR MaLR -1 389 226 1734 159 43 20 chr2 105702307 105702608 -147553975 - AluJo SINE Alu -4 308 1 2252 130 34 17 chr2 105702608 105702795 -147553788 - MLT1B LTR MaLR -164 226 29 297 230 0 27 chr2 105702821 105702895 -147553688 - LTR37B LTR ERV1 -199 269 198 2159 121 0 7 chr2 105702967 105703272 -147553311 + AluSx SINE Alu 1 303 -9 23 33 0 0 chr2 105703534 105703564 -147553019 + AT_rich Low_complexity Low_complexity 1 30 0 2230 122 3 0 chr2 105703675 105703979 -147552604 - AluSx SINE Alu -7 305 1 243 292 57 72 chr2 105703992 105704324 -147552259 - L1MC/D LINE L1 -2167 5641 5315 677 168 23 30 chr2 105704343 105704474 -147552109 - FLAM_C SINE Alu -3 130 1 222 118 0 0 chr2 105704579 105704613 -147551970 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 215 313 16 0 chr2 105707267 105707331 -147549252 - L2 LINE L2 -14 3299 3235 1510 200 65 21 chr2 105707406 105707746 -147548837 + L1MB5 LINE L1 5770 6124 -50 2302 110 0 0 chr2 105707747 105708046 -147548537 - AluSx SINE Alu -12 300 2 22 0 0 0 chr2 105708108 105708130 -147548453 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr2 105708250 105708273 -147548310 + AT_rich Low_complexity Low_complexity 1 23 0 335 206 55 0 chr2 105708511 105708584 -147547999 + MER5A DNA MER1_type 4 80 -109 2386 95 0 16 chr2 105708603 105708919 -147547664 + AluSp SINE Alu 1 311 -2 356 164 0 226 chr2 105708938 105709019 -147547564 + MER5A DNA MER1_type 61 90 -99 2108 113 0 35 chr2 105709019 105709329 -147547254 + AluSq SINE Alu 3 301 -12 356 164 0 226 chr2 105709329 105709406 -147547177 + MER5A DNA MER1_type 90 183 -6 393 39 0 0 chr2 105709704 105709755 -147546828 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 1400 7 0 0 chr2 105709758 105709913 -147546670 - L1HS LINE L1 0 6155 6001 2540 11 0 0 chr2 105709913 105710196 -147546387 + L1HS LINE L1 5697 5979 -176 1585 146 67 4 chr2 105710437 105710739 -147545844 - AluJo SINE Alu 0 319 1 319 216 81 0 chr2 105711906 105711980 -147544603 - L2 LINE L2 -6 3266 3187 2561 63 0 0 chr2 105712251 105712552 -147544031 - AluY SINE Alu -10 301 1 1111 125 0 0 chr2 105712552 105712696 -147543887 - AluSq/x SINE Alu -168 144 1 1434 150 126 12 chr2 105712838 105713092 -147543491 - AluJo SINE Alu -19 293 11 180 0 0 0 chr2 105713254 105713274 -147543309 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 1620 227 60 26 chr2 105713470 105713868 -147542715 + Charlie1b DNA MER1_type 1 417 -2344 2051 123 66 23 chr2 105713868 105714217 -147542366 - THE1B LTR MaLR 0 364 1 1620 227 60 26 chr2 105714217 105714272 -147542311 + Charlie1b DNA MER1_type 417 469 -54 180 0 0 0 chr2 105714272 105714292 -147542291 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 248 140 260 0 chr2 105715115 105715165 -147541418 + Charlie1b DNA MER1_type 461 523 0 2078 139 35 14 chr2 105715813 105716180 -147540403 - THE1C LTR MaLR 0 375 1 259 236 0 0 chr2 105716219 105716274 -147540309 + Charlie1 DNA MER1_type 167 2459 -302 1179 98 11 35 chr2 105716332 105716506 -147540077 + L1PA16 LINE L1 5759 5907 -259 1256 112 5 31 chr2 105716506 105716699 -147539884 + L1PA16 LINE L1 5974 6164 -2 1179 98 11 35 chr2 105716699 105716721 -147539862 + L1PA16 LINE L1 5907 5928 -238 298 122 0 20 chr2 105716779 105716828 -147539755 + MLT1B LTR MaLR 1 48 -326 * 615 231 77 43 chr2 105716825 105717059 -147539524 + MLT1B LTR MaLR 149 390 0 226 290 65 32 chr2 105717270 105717363 -147539220 + MIR SINE MIR 23 118 -90 2751 228 55 81 chr2 105717366 105717638 -147538945 + MER97c DNA MER1_type? 1 278 -812 2149 209 50 47 chr2 105717638 105718260 -147538323 - MLT1E3 LTR MaLR 0 624 1 2751 228 55 81 chr2 105718260 105718800 -147537783 + MER97c DNA MER1_type? 278 830 -260 2072 110 7 3 chr2 105718800 105719118 -147537465 - AluSq SINE Alu 0 319 1 2751 228 55 81 chr2 105719118 105719329 -147537254 + MER97c DNA MER1_type? 830 998 -92 1799 150 90 38 chr2 105719329 105719675 -147536908 + THE1B LTR MaLR 1 364 0 2751 228 55 81 chr2 105719675 105719766 -147536817 + MER97c DNA MER1_type? 998 1090 0 186 324 0 0 chr2 105719818 105719886 -147536697 - MIR SINE MIR -24 238 171 245 280 60 10 chr2 105720240 105720340 -147536243 + L2 LINE L2 3159 3263 -9 1645 172 0 22 chr2 105720613 105720886 -147535697 - AluJo SINE Alu -43 269 3 2674 173 17 15 chr2 105720887 105721354 -147535229 + LTR26B LTR ERV1 64 531 0 379 189 27 0 chr2 105721354 105721425 -147535158 + MLT1I LTR MaLR 331 403 -6 198 0 0 0 chr2 105722406 105722428 -147534155 + (A)n Simple_repeat Simple_repeat 1 22 0 258 156 0 0 chr2 105722468 105722513 -147534070 + T-rich Low_complexity Low_complexity 1 45 0 213 0 81 0 chr2 105723396 105723433 -147533150 + C-rich Low_complexity Low_complexity 2 41 0 1998 131 34 7 chr2 105723961 105724258 -147532325 + AluJb SINE Alu 1 305 -7 841 125 0 22 chr2 105724543 105724679 -147531904 + AluJb SINE Alu 1 133 -179 1918 162 64 22 chr2 105726650 105727009 -147529574 - MLT1A2 LTR MaLR 0 374 1 2309 103 3 3 chr2 105727062 105727362 -147529221 + AluSq SINE Alu 1 300 -13 8740 106 19 25 chr2 105727587 105728895 -147527688 - HSMAR2 DNA Mariner 0 1302 2 415 282 17 0 chr2 105729250 105729367 -147527216 - L2 LINE L2 -15 3298 3180 236 114 0 0 chr2 105729438 105729473 -147527110 - MSTD LTR MaLR 0 396 362 1411 218 127 38 chr2 105729480 105729898 -147526685 - MSTB2 LTR MaLR 0 457 3 617 283 255 39 chr2 105730036 105730233 -147526350 - L2 LINE L2 -410 2904 2751 3648 91 26 8 chr2 105730233 105730737 -147525846 - LTR10D LTR ERV1 0 513 1 617 283 255 39 chr2 105730737 105731338 -147525245 - L2 LINE L2 -563 2751 1933 1102 254 187 13 chr2 105731725 105732353 -147524230 - HAL1 LINE L1 -1723 784 1 180 77 0 0 chr2 105732845 105732871 -147523712 + (GTTTG)n Simple_repeat Simple_repeat 2 27 0 198 308 15 0 chr2 105733311 105733376 -147523207 - L3 LINE CR1 -84 1493 1428 2581 142 30 33 chr2 105733420 105733600 -147522983 - Tigger2a DNA MER2_type -2274 434 255 225 65 0 0 chr2 105733600 105733631 -147522952 + (CA)n Simple_repeat Simple_repeat 2 32 0 2581 142 30 33 chr2 105733631 105733880 -147522703 - Tigger2a DNA MER2_type -2453 255 6 301 196 0 0 chr2 105734004 105734060 -147522523 - MER2 DNA MER2_type -283 62 7 653 216 0 12 chr2 105734065 105734236 -147522347 + (CATATA)n Simple_repeat Simple_repeat 6 174 0 255 194 29 39 chr2 105734250 105734353 -147522230 + (CATATA)n Simple_repeat Simple_repeat 3 104 0 309 283 0 22 chr2 105734358 105734450 -147522133 - L1MC4 LINE L1 -1339 6703 6614 239 297 23 0 chr2 105734592 105734767 -147521816 + (TA)n Simple_repeat Simple_repeat 2 180 0 1629 146 81 34 chr2 105734821 105735144 -147521439 + MER2 DNA MER2_type 1 338 -7 2207 111 10 3 chr2 105735147 105735453 -147521130 + AluSx SINE Alu 1 308 -4 302 326 95 0 chr2 105735500 105735647 -147520936 - MIR SINE MIR -82 180 20 427 155 10 29 chr2 105735885 105735988 -147520595 - MER5A DNA MER1_type -80 109 9 283 170 0 0 chr2 105736069 105736122 -147520461 + MIR SINE MIR 102 154 -108 1937 119 18 4 chr2 105736403 105736706 -147519877 - AluSx SINE Alu 0 307 1 188 226 137 105 chr2 105737866 105738056 -147518527 + MIR SINE MIR 63 258 -4 363 100 33 0 chr2 105738355 105738415 -147518168 - MER53 DNA DNA -101 88 27 273 98 0 0 chr2 105738427 105738468 -147518115 + (TG)n Simple_repeat Simple_repeat 1 41 0 26 64 0 0 chr2 105738800 105738847 -147517736 + AT_rich Low_complexity Low_complexity 1 47 0 1836 143 0 26 chr2 105739081 105739419 -147517164 - AluJb SINE Alu 0 312 1 1500 273 83 25 chr2 105739515 105739733 -147516850 - L1ME2 LINE L1 -258 5906 5702 198 0 0 0 chr2 105739733 105739755 -147516828 + (TA)n Simple_repeat Simple_repeat 1 22 0 1500 273 83 25 chr2 105739755 105740300 -147516283 - L1ME2 LINE L1 -462 5702 5190 880 76 0 15 chr2 105740300 105740432 -147516151 + (TTCC)n Simple_repeat Simple_repeat 3 132 0 1653 184 0 14 chr2 105740434 105740716 -147515867 - AluJo SINE Alu -34 278 1 1500 273 83 25 chr2 105740716 105741056 -147515527 - L1ME2 LINE L1 -974 5190 4733 473 266 98 7 chr2 105741227 105741645 -147514938 - L1ME LINE L1 -362 5802 5257 602 213 104 59 chr2 105741697 105741899 -147514684 + MER58C DNA MER1_type 1 211 -4 286 119 0 0 chr2 105742811 105742853 -147513730 - MER57A LTR ERV1 -67 336 295 1360 221 67 31 chr2 105742856 105743213 -147513370 - L1MB7 LINE L1 -10 6174 5805 2260 160 16 47 chr2 105743216 105743252 -147513331 - MER65C LTR ERV1 0 461 425 2466 74 0 0 chr2 105743252 105743548 -147513035 - AluY SINE Alu -2 309 14 2260 160 16 47 chr2 105743548 105743956 -147512627 - MER65C LTR ERV1 -36 425 31 4305 217 21 41 chr2 105743963 105745703 -147510880 - L1MB7 LINE L1 -378 5806 4098 1202 101 0 0 chr2 105745703 105745852 -147510731 + AluSp SINE Alu 136 284 -29 1106 207 97 61 chr2 105746003 105746427 -147510156 - MER41B LTR ERV1 -34 601 114 348 175 225 0 chr2 105746428 105746508 -147510075 - MER46A DNA MER2_type -138 98 1 519 211 0 10 chr2 105747102 105747206 -147509377 - L1MB5 LINE L1 -144 6030 5928 * 2420 212 39 19 chr2 105747182 105747819 -147508764 - L1MB7 LINE L1 -2382 3764 3115 2560 50 0 0 chr2 105747855 105748154 -147508429 + AluY SINE Alu 1 299 -12 590 227 93 65 chr2 105749837 105750033 -147506550 - L1MC5 LINE L1 -48 7913 7705 2106 107 10 20 chr2 105750033 105750333 -147506250 + AluSq SINE Alu 1 297 -16 590 227 93 65 chr2 105750333 105750414 -147506169 - L1MC5 LINE L1 -256 7705 7628 349 184 35 53 chr2 105750418 105750532 -147506051 - L1MC5 LINE L1 -179 7782 7671 2073 123 0 3 chr2 105750642 105750926 -147505657 - AluSx SINE Alu -29 283 1 2244 115 3 13 chr2 105752109 105752422 -147504161 + AluSx SINE Alu 1 310 -2 656 247 84 45 chr2 105752547 105753125 -147503458 - L1MC5 LINE L1 -50 7911 7270 2396 61 0 20 chr2 105753291 105753584 -147502999 - AluY SINE Alu -15 296 10 2154 122 0 3 chr2 105753584 105753872 -147502711 - AluSx SINE Alu -25 287 1 25 0 0 0 chr2 105755057 105755082 -147501501 + AT_rich Low_complexity Low_complexity 1 25 0 2352 92 10 0 chr2 105756045 105756340 -147500243 - AluSx SINE Alu -14 298 1 24 0 0 0 chr2 105756947 105756971 -147499612 + AT_rich Low_complexity Low_complexity 1 24 0 2223 125 0 0 chr2 105757081 105757386 -147499197 + AluSx SINE Alu 1 305 -7 240 35 0 0 chr2 105757403 105757432 -147499151 + (GAA)n Simple_repeat Simple_repeat 2 30 0 2300 118 0 6 chr2 105757482 105757795 -147498788 + AluSx SINE Alu 1 311 -1 2417 86 0 3 chr2 105757803 105758105 -147498478 + AluSq SINE Alu 1 301 -12 407 265 14 20 chr2 105758107 105758254 -147498329 + L1M4 LINE L1 2954 3099 -3047 182 239 0 0 chr2 105758380 105758426 -147498157 + L2 LINE L2 3268 3313 0 1388 176 11 37 chr2 105758450 105758802 -147497781 - Charlie5 DNA MER1_type -36 2576 2234 434 161 143 36 chr2 105758799 105758911 -147497672 - Charlie5 DNA MER1_type -2485 127 4 * 673 144 0 0 chr2 105759043 105759147 -147497436 + AluJb SINE Alu 3 106 -206 1003 84 22 22 chr2 105759151 105759162 -147497421 + (GAAA)n Simple_repeat Simple_repeat 1 190 0 1003 84 22 22 chr2 105759162 105759341 -147497242 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 3646 133 2 6 chr2 105760285 105760813 -147495770 + MER1A DNA MER1_type 1 526 -1 490 248 56 41 chr2 105760838 105760970 -147495613 + L1ME LINE L1 5517 5614 -507 2257 111 13 0 chr2 105760970 105761096 -147495487 + AluSx SINE Alu 1 124 -188 333 82 0 0 chr2 105761096 105761145 -147495438 + (CA)n Simple_repeat Simple_repeat 2 50 0 2257 111 13 0 chr2 105761145 105761316 -147495267 + AluSx SINE Alu 124 302 -10 490 248 56 41 chr2 105761316 105761439 -147495144 + L1ME LINE L1 5614 5734 -387 795 158 0 38 chr2 105761527 105761660 -147494923 - FLAM_C SINE Alu -5 128 1 5588 225 61 11 chr2 105761888 105763532 -147493051 - L1MEc LINE L1 -2218 4426 2701 1828 164 3 10 chr2 105763560 105763859 -147492724 - AluJo SINE Alu -15 297 1 1111 184 129 110 chr2 105763871 105764327 -147492256 + MER4C LTR ERV1 1 465 0 466 254 99 35 chr2 105764806 105765007 -147491576 - L1M4 LINE L1 -6309 233 20 199 269 278 0 chr2 105765406 105765514 -147491069 - MIR SINE MIR 0 262 125 237 237 0 34 chr2 105765881 105765940 -147490643 - MIR SINE MIR -62 146 90 1668 197 71 12 chr2 105766873 105767294 -147489289 - L1MEc LINE L1 -4063 2762 2317 1001 75 0 0 chr2 105767295 105767437 -147489146 - AluY SINE Alu 0 310 169 308 242 3 7 chr2 105767441 105767578 -147489005 + L1MDa LINE L1 1284 1466 -4916 3226 208 45 104 chr2 105767580 105768579 -147488004 - L1MEc LINE L1 -5420 1405 466 344 377 0 9 chr2 105768961 105769075 -147487508 - L2 LINE L2 0 3272 3160 225 83 0 0 chr2 105769473 105769509 -147487074 + (TTAA)n Simple_repeat Simple_repeat 3 38 0 1637 104 158 0 chr2 105769509 105769750 -147486833 - AluSp SINE Alu -30 283 5 2089 108 0 0 chr2 105769775 105770043 -147486540 - AluSx SINE Alu -44 268 1 588 169 27 34 chr2 105770233 105770381 -147486202 - L1MA10 LINE L1 0 6334 6188 239 193 18 149 chr2 105770420 105770534 -147486049 + MIR3 SINE MIR 79 177 -31 2108 147 0 0 chr2 105771149 105771461 -147485122 + AluSx SINE Alu 1 312 0 2174 113 17 0 chr2 105771825 105772117 -147484466 + AluSg SINE Alu 1 297 -13 332 119 17 0 chr2 105772132 105772191 -147484392 + (TTCA)n Simple_repeat Simple_repeat 2 61 0 289 340 53 0 chr2 105772198 105772348 -147484235 + L2 LINE L2 2924 3081 -191 749 228 77 38 chr2 105772442 105772888 -147483695 - MLT1H LTR MaLR 0 549 5 21 57 0 0 chr2 105773014 105773049 -147483534 + AT_rich Low_complexity Low_complexity 1 35 0 2315 93 0 3 chr2 105773056 105773347 -147483236 + AluSx SINE Alu 1 290 -22 2607 39 7 7 chr2 105773824 105774132 -147482451 - AluY SINE Alu -3 308 1 304 306 126 10 chr2 105774207 105774406 -147482177 + MIR SINE MIR 22 243 -19 377 271 49 25 chr2 105774923 105775045 -147481538 + MER45A DNA AcHobo 54 178 0 2197 98 38 0 chr2 105775287 105775574 -147481009 + AluSq SINE Alu 1 298 -15 25 65 0 0 chr2 105775613 105775659 -147480924 + AT_rich Low_complexity Low_complexity 1 46 0 752 168 0 0 chr2 105775755 105775886 -147480697 + FLAM_C SINE Alu 1 131 -12 186 133 0 0 chr2 105775886 105775916 -147480667 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 2058 129 44 30 chr2 105775931 105776170 -147480413 + MLT1B LTR MaLR 21 268 -122 2314 105 0 0 chr2 105776170 105776464 -147480119 + AluSx SINE Alu 1 294 -18 2058 129 44 30 chr2 105776464 105776589 -147479994 + MLT1B LTR MaLR 268 390 0 1806 160 7 10 chr2 105777090 105777383 -147479200 + AluJb SINE Alu 3 294 -18 2301 109 3 0 chr2 105777970 105778272 -147478311 + AluSq SINE Alu 1 303 -10 472 226 23 15 chr2 105780121 105780254 -147476329 + MIR SINE MIR 13 146 -116 2393 78 0 0 chr2 105781070 105781354 -147475229 - AluSg SINE Alu -20 290 7 2244 117 0 0 chr2 105782146 105782454 -147474129 + AluSg SINE Alu 1 308 -2 352 270 63 0 chr2 105782771 105782882 -147473701 - L2 LINE L2 -24 3289 3172 1630 143 6 116 chr2 105782890 105783225 -147473358 + AluJo SINE Alu 1 298 -4 371 252 133 29 chr2 105783258 105783468 -147473115 - L2 LINE L2 -258 3055 2824 938 219 94 0 chr2 105783583 105783807 -147472776 + MIR SINE MIR 2 246 -16 2663 181 13 17 chr2 105783842 105784395 -147472188 - L1MDb LINE L1 -4770 1701 848 262 239 60 0 chr2 105784818 105784885 -147471698 - L1MDb LINE L1 -6211 329 259 2508 127 9 94 chr2 105785026 105785601 -147470982 - L1 LINE L1 -1438 4708 4183 329 248 107 16 chr2 105785616 105785737 -147470846 + L2 LINE L2 3182 3313 0 509 270 160 0 chr2 105785771 105785971 -147470612 + MIR SINE MIR 31 262 0 2268 118 0 0 chr2 105786674 105786970 -147469613 - AluSg SINE Alu -14 296 1 2331 109 3 0 chr2 105787147 105787459 -147469124 - AluSp SINE Alu 0 313 1 745 256 64 0 chr2 105788431 105788634 -147467949 + MIR SINE MIR 17 232 -30 525 200 70 92 chr2 105789633 105789818 -147466765 - L1ME3A LINE L1 -219 5951 5771 459 206 39 0 chr2 105789819 105789921 -147466662 - MIR SINE MIR -81 181 76 378 61 0 0 chr2 105789951 105790000 -147466583 + (TA)n Simple_repeat Simple_repeat 1 49 0 1836 138 38 7 chr2 105790000 105790291 -147466292 - AluJb SINE Alu -11 301 2 744 285 63 37 chr2 105790291 105790506 -147466077 - L1ME3A LINE L1 -383 5787 5562 1924 137 0 0 chr2 105790506 105790783 -147465800 - AluSx SINE Alu -9 303 27 744 285 63 37 chr2 105790783 105790837 -147465746 - L1ME3A LINE L1 -608 5562 5511 434 254 8 0 chr2 105790844 105790970 -147465613 - L1ME3A LINE L1 -709 5453 5327 1095 234 58 61 chr2 105791106 105791570 -147465013 + L1MDb LINE L1 353 948 -5595 * 1667 215 49 9 chr2 105791561 105792012 -147464571 + L1MDb LINE L1 1692 2160 -4380 1572 229 22 30 chr2 105792025 105792608 -147463975 + L1MDb LINE L1 2207 2785 -3755 2600 111 54 45 chr2 105792608 105792985 -147463598 - MSTC LTR MaLR 0 428 45 2396 80 0 13 chr2 105792985 105793287 -147463296 + AluY SINE Alu 1 298 -13 2600 111 54 45 chr2 105793287 105793333 -147463250 - MSTC LTR MaLR -383 45 1 1572 229 22 30 chr2 105793333 105793408 -147463175 + L1MDb LINE L1 2785 2859 -3681 193 256 0 0 chr2 105793816 105793855 -147462728 - L2 LINE L2 -80 3192 3154 590 174 104 9 chr2 105794063 105794335 -147462248 - MLT1A1 LTR MaLR 0 374 45 228 180 0 0 chr2 105794332 105794382 -147462201 - AluSq SINE Alu 0 300 251 * 1581 98 5 0 chr2 105794382 105794587 -147461996 - AluSq SINE Alu -107 206 1 2003 200 45 40 chr2 105794949 105795443 -147461140 - MLT1D LTR MaLR -9 496 1 1546 174 6 65 chr2 105796057 105796378 -147460205 - AluJo SINE Alu -6 306 5 1016 237 39 11 chr2 105796416 105796695 -147459888 - L1MA4 LINE L1 -11 6289 6003 6614 45 2 0 chr2 105797573 105798365 -147458218 - L1PA6 LINE L1 -2 6152 5359 2293 116 0 3 chr2 105799320 105799622 -147456961 - AluSq SINE Alu -10 303 3 1903 91 3 45 chr2 105802111 105802397 -147454186 - AluSx SINE Alu 0 312 39 1962 121 4 0 chr2 105802576 105802840 -147453743 - AluSx SINE Alu -39 273 9 650 243 95 18 chr2 105802857 105803079 -147453504 - L1M4 LINE L1 -1164 4982 4744 8059 127 51 19 chr2 105803206 105804117 -147452466 + Tigger1 DNA MER2_type 2 966 -1452 2348 105 7 0 chr2 105804117 105804423 -147452160 - AluSq SINE Alu -5 308 1 8059 127 51 19 chr2 105804423 105804792 -147451791 + Tigger1 DNA MER2_type 966 1322 -1096 426 227 0 0 chr2 105804793 105804868 -147451715 + AluJ/FLAM SINE Alu 1 75 -227 2777 145 7 0 chr2 105804968 105805376 -147451207 + HSMAR2 DNA Mariner 828 1238 -64 760 154 8 0 chr2 105805385 105805508 -147451075 + FLAM_A SINE Alu 10 133 -9 346 113 16 0 chr2 105805509 105805571 -147451012 + HSMAR2 DNA Mariner 1240 1302 0 481 202 0 16 chr2 105805589 105805718 -147450865 + (TATG)n Simple_repeat Simple_repeat 2 128 0 198 382 0 0 chr2 105806330 105806419 -147450164 + MIR3 SINE MIR 78 166 -42 1848 140 6 35 chr2 105807052 105807366 -147449217 + AluJo SINE Alu 1 305 -7 2263 86 21 0 chr2 105807366 105807657 -147448926 + AluY SINE Alu 1 297 -14 949 247 181 13 chr2 105807911 105808308 -147448275 - LTR16B LTR ERVL 0 464 1 348 24 0 0 chr2 105808606 105808647 -147447936 + (TG)n Simple_repeat Simple_repeat 2 42 0 1816 164 10 13 chr2 105809902 105810206 -147446377 + AluJb SINE Alu 1 303 -9 447 161 44 22 chr2 105810206 105810343 -147446240 + GA-rich Low_complexity Low_complexity 1 140 0 235 173 0 58 chr2 105810534 105810586 -147445997 + Alu SINE Alu 251 299 0 655 159 53 0 chr2 105810586 105810756 -147445827 + GA-rich Low_complexity Low_complexity 2 180 0 234 0 0 0 chr2 105811989 105812015 -147444568 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 180 274 27 55 chr2 105812760 105812833 -147443750 - L2 LINE L2 -1389 1925 1855 2079 118 0 56 chr2 105813090 105813413 -147443170 - AluSx SINE Alu -3 309 5 384 216 31 4 chr2 105813946 105814052 -147442531 - L1MEc LINE L1 -3791 2424 2327 * 2433 169 47 109 chr2 105814051 105814289 -147442294 + L1MB4 LINE L1 5519 5770 -410 232 255 0 0 chr2 105814289 105814340 -147442243 - MLT2D LTR ERVL 0 414 364 2433 169 47 109 chr2 105814340 105814756 -147441827 + L1MB4 LINE L1 5770 6179 -1 357 232 11 0 chr2 105814790 105814885 -147441698 + L1M4 LINE L1 3880 3975 -2171 2166 136 0 0 chr2 105814885 105815186 -147441397 + AluSx SINE Alu 1 301 -11 14028 180 29 17 chr2 105815360 105817220 -147439363 - L1 LINE L1 -1088 5760 3925 2289 94 0 0 chr2 105817220 105817507 -147439076 + AluSx SINE Alu 1 287 -25 14028 180 29 17 chr2 105817507 105818129 -147438454 - L1 LINE L1 -2923 3925 3312 2263 150 81 69 chr2 105818129 105818477 -147438106 - MER66B LTR ERV1 0 486 144 2159 109 3 10 chr2 105818477 105818771 -147437812 - AluSx SINE Alu -20 292 1 2263 150 81 69 chr2 105818771 105818818 -147437765 - MER66B LTR ERV1 -342 144 99 2124 133 3 0 chr2 105818818 105819119 -147437464 - AluSq SINE Alu -11 302 1 2263 150 81 69 chr2 105819119 105819202 -147437381 - MER66B LTR ERV1 -387 99 1 14028 180 29 17 chr2 105819202 105819693 -147436890 - L1 LINE L1 -3536 3312 2748 360 192 16 72 chr2 105820120 105820245 -147436338 + LTR41 LTR ERVL 650 767 -6 1257 245 86 48 chr2 105820245 105820344 -147436239 + L1M4 LINE L1 3995 4089 -2057 2363 92 0 10 chr2 105820344 105820648 -147435935 + AluSq SINE Alu 1 301 -12 1257 245 86 48 chr2 105820648 105821152 -147435431 + L1M4 LINE L1 4089 4621 -1525 528 133 0 0 chr2 105821176 105821251 -147435332 - AluSg/x SINE Alu -17 293 219 182 239 22 0 chr2 105821615 105821661 -147434922 + MIR3 SINE MIR 114 160 -48 313 232 29 0 chr2 105821662 105821731 -147434852 - MER2 DNA MER2_type 0 345 275 2034 110 10 40 chr2 105821733 105822033 -147434550 + AluSx SINE Alu 4 294 -18 1635 212 112 37 chr2 105822339 105822532 -147434051 + MLT1C LTR MaLR 6 183 -284 369 0 0 0 chr2 105822532 105822573 -147434010 + (CA)n Simple_repeat Simple_repeat 2 42 0 1635 212 112 37 chr2 105822573 105822809 -147433774 + MLT1C LTR MaLR 183 467 0 357 243 68 40 chr2 105822910 105823058 -147433525 + MIR SINE MIR 104 255 -7 231 214 0 0 chr2 105823420 105823462 -147433121 + (TGAA)n Simple_repeat Simple_repeat 1 42 0 2436 70 3 7 chr2 105823529 105823828 -147432755 + AluSg1 SINE Alu 1 298 -11 289 274 63 47 chr2 105824814 105825004 -147431579 + MER117 DNA MER1_type 3 195 -2 2183 113 0 13 chr2 105825296 105825597 -147430986 - AluSq SINE Alu -12 301 5 697 141 22 0 chr2 105825696 105825831 -147430752 + GA-rich Low_complexity Low_complexity 3 140 0 1824 135 0 49 chr2 105825891 105826195 -147430388 - AluJo SINE Alu -19 293 5 2278 129 0 0 chr2 105827254 105827564 -147429019 + AluSg SINE Alu 1 310 0 4537 132 10 14 chr2 105829093 105829237 -147427346 - MER50 LTR ERV1 -23 711 568 2486 76 0 10 chr2 105829237 105829540 -147427043 + AluSx SINE Alu 1 300 -12 4537 132 10 14 chr2 105829540 105830109 -147426474 - MER50 LTR ERV1 -166 568 1 1322 237 64 5 chr2 105830298 105830690 -147425893 + Charlie2a DNA MER1_type 689 1103 -1759 478 232 20 20 chr2 105830689 105830840 -147425743 + Charlie2a DNA MER1_type 2239 2389 -473 * 784 217 211 3 chr2 105831085 105831417 -147425166 + Charlie2a DNA MER1_type 2457 2857 -5 1960 133 34 7 chr2 105831480 105831773 -147424810 - AluSx SINE Alu 0 312 12 403 203 0 0 chr2 105831955 105832029 -147424554 + MER66B LTR ERV1 1 74 -412 1426 124 0 0 chr2 105832038 105832224 -147424359 + AluSq SINE Alu 1 186 -127 2052 106 7 4 chr2 105832224 105832499 -147424084 - AluSp SINE Alu -32 281 6 1297 101 17 11 chr2 105832565 105832743 -147423840 + AluJb SINE Alu 1 179 -133 4307 131 50 4 chr2 105832743 105833421 -147423162 + MER50 LTR ERV1 3 711 -23 655 169 0 52 chr2 105833422 105833558 -147423025 + AluJb SINE Alu 176 304 -8 186 317 125 0 chr2 105833854 105833958 -147422625 + L2 LINE L2 2439 2555 -759 934 114 0 15 chr2 105835399 105835531 -147421052 - FLAM_C SINE Alu 0 133 4 1737 237 59 0 chr2 105836009 105836418 -147420165 + L1ME3A LINE L1 5717 6149 -21 2127 98 14 0 chr2 105836429 105836705 -147419878 - AluSx SINE Alu -26 286 7 1575 164 58 20 chr2 105838165 105838327 -147418256 - AluJo SINE Alu -8 304 125 2425 80 3 0 chr2 105838327 105838628 -147417955 - AluY SINE Alu -9 302 1 1575 164 58 20 chr2 105838628 105838758 -147417825 - AluJo SINE Alu -187 125 1 606 287 51 13 chr2 105839324 105839561 -147417022 + MIR SINE MIR 8 253 -9 2266 113 0 0 chr2 105839643 105839945 -147416638 - AluSx SINE Alu 0 312 11 359 349 88 4 chr2 105840026 105840264 -147416319 - L3 LINE CR1 -75 1502 1245 341 251 108 66 chr2 105840436 105840603 -147415980 + MLT1K LTR MaLR 67 240 -348 2202 110 10 0 chr2 105840673 105840963 -147415620 - AluSg SINE Alu -17 293 1 354 162 0 40 chr2 105841111 105841185 -147415398 + MLT1K LTR MaLR 518 588 0 2356 91 3 0 chr2 105841646 105841944 -147414639 - AluSp SINE Alu -14 299 1 1134 68 0 0 chr2 105841946 105842078 -147414505 - AluSp SINE Alu -181 132 1 2211 127 57 8 chr2 105842170 105842540 -147414043 - MLT1B LTR MaLR 0 390 3 376 286 24 54 chr2 105843392 105843560 -147413023 + L2 LINE L2 2889 3051 -262 397 192 0 0 chr2 105843593 105843666 -147412917 + MER5A DNA MER1_type 1 73 -116 1358 32 0 0 chr2 105843666 105843824 -147412759 - L1P2 LINE L1 -606 5549 5392 237 65 0 0 chr2 105843824 105843855 -147412728 + (A)n Simple_repeat Simple_repeat 1 31 0 1253 172 128 0 chr2 105843865 105844092 -147412491 + AluSg SINE Alu 1 256 -54 724 30 20 10 chr2 105844095 105844194 -147412389 + (GAAA)n Simple_repeat Simple_repeat 1 100 0 275 206 315 0 chr2 105844194 105844286 -147412297 + MER5A DNA MER1_type 66 186 -3 2164 126 0 0 chr2 105844369 105844662 -147411921 + AluSq SINE Alu 1 293 -20 1171 154 0 0 chr2 105844680 105844855 -147411728 + AluSg/x SINE Alu 133 307 -5 1020 216 0 0 chr2 105844857 105845061 -147411522 - L1MA6 LINE L1 -10 6290 6087 4640 119 6 30 chr2 105845062 105845400 -147411183 - L1MA6 LINE L1 -310 5990 5645 2072 117 0 13 chr2 105845400 105845699 -147410884 - AluSx SINE Alu -17 295 1 4640 119 6 30 chr2 105845699 105846255 -147410328 - L1MA6 LINE L1 -655 5645 5120 1137 204 13 0 chr2 105846250 105846481 -147410102 - L1MA6 LINE L1 -986 5160 4927 * 867 142 0 0 chr2 105846482 105846616 -147409967 - AluSg/x SINE Alu -6 306 173 444 167 0 150 chr2 105846624 105846744 -147409839 - L1MA6 LINE L1 -1234 4912 4811 1277 186 22 32 chr2 105847397 105847741 -147408842 - AluJb SINE Alu 0 312 1 199 330 165 0 chr2 105848428 105848537 -147408046 - L2 LINE L2 -7 3306 3180 330 236 28 28 chr2 105849305 105849411 -147407172 + MIR3 SINE MIR 87 192 -16 2296 110 0 0 chr2 105849498 105849790 -147406793 - AluSq SINE Alu -21 292 1 218 259 35 47 chr2 105850403 105850488 -147406095 - MIR3 SINE MIR -38 170 87 12934 102 39 25 chr2 105850755 105850938 -147405645 - Tigger1 DNA MER2_type 0 2418 2239 1795 179 0 16 chr2 105850938 105851251 -147405332 + AluSx SINE Alu 1 308 -4 12934 102 39 25 chr2 105851251 105852158 -147404425 - Tigger1 DNA MER2_type -179 2239 1346 2282 87 0 0 chr2 105852158 105852435 -147404148 - AluY SINE Alu -19 292 16 12934 102 39 25 chr2 105852435 105853262 -147403321 - Tigger1 DNA MER2_type -1072 1346 469 2524 50 3 3 chr2 105853262 105853560 -147403023 + AluY SINE Alu 1 298 -13 12934 102 39 25 chr2 105853560 105853601 -147402982 - Tigger1 DNA MER2_type -1949 469 430 1534 146 20 12 chr2 105853851 105854105 -147402478 - AluSq SINE Alu -57 256 1 1389 131 5 27 chr2 105854498 105854720 -147401863 + AluJo SINE Alu 85 301 -11 2163 133 0 7 chr2 105854720 105855022 -147401561 + AluSx SINE Alu 1 300 -12 1264 173 28 28 chr2 105855026 105855274 -147401309 + AluJo SINE Alu 39 286 -26 2848 19 0 0 chr2 105855443 105855754 -147400829 + AluYa5 SINE Alu 1 311 0 1942 204 46 24 chr2 105856327 105856497 -147400086 - L1ME2 LINE L1 -10 6154 5985 551 318 43 34 chr2 105856497 105856824 -147399759 - L1MB2 LINE L1 -191 5980 5651 2531 52 0 55 chr2 105856857 105857186 -147399397 - AluY SINE Alu 0 311 1 2236 125 0 6 chr2 105857522 105857835 -147398748 + AluSx SINE Alu 1 311 -1 1158 321 61 6 chr2 105858287 105858813 -147397770 + HAL1 LINE L1 110 664 -1843 479 224 0 10 chr2 105858827 105858925 -147397658 + MLT1B LTR MaLR 294 390 0 2497 81 0 0 chr2 105858950 105859259 -147397324 + AluY SINE Alu 1 309 -2 2155 135 0 6 chr2 105859283 105859595 -147396988 + AluSx SINE Alu 3 312 0 3036 246 125 65 chr2 105859605 105860104 -147396479 + HAL1 LINE L1 673 1141 -1366 1827 180 10 0 chr2 105860104 105860409 -147396174 + AluJb SINE Alu 1 308 -4 3036 246 125 65 chr2 105860409 105861026 -147395557 + HAL1 LINE L1 1141 1720 -787 2505 158 22 26 chr2 105861026 105861489 -147395094 + LOR1b LTR ERV1 1 461 0 3036 246 125 65 chr2 105861489 105862095 -147394488 + HAL1 LINE L1 1720 2499 -8 2129 114 3 10 chr2 105862137 105862435 -147394148 - AluSx SINE Alu -14 298 3 2502 92 0 0 chr2 105862893 105863199 -147393384 - AluSx SINE Alu -6 306 1 2534 146 39 57 chr2 105864151 105864664 -147391919 + MLT1D LTR MaLR 2 505 0 700 189 8 152 chr2 105864766 105864835 -147391748 - MER3 DNA MER1_type 0 209 132 1709 168 11 11 chr2 105864835 105865109 -147391474 + AluJb SINE Alu 13 286 -26 700 189 8 152 chr2 105865109 105865283 -147391300 - MER3 DNA MER1_type -77 132 1 640 115 0 0 chr2 105865424 105865520 -147391063 - AluSg/x SINE Alu 0 310 215 1344 176 74 35 chr2 105865868 105866124 -147390459 - AluJo SINE Alu -44 268 3 448 294 144 62 chr2 105866308 105866854 -147389729 - L1M4 LINE L1 -1375 4771 4272 2211 42 0 0 chr2 105866854 105867119 -147389464 - L1PA4 LINE L1 -3 6152 5888 448 294 144 62 chr2 105867119 105867518 -147389065 - L1M4 LINE L1 -1874 4272 3907 279 0 0 0 chr2 105867518 105867549 -147389034 + (TA)n Simple_repeat Simple_repeat 2 32 0 2487 70 0 0 chr2 105867549 105867850 -147388733 - AluY SINE Alu -10 301 1 448 294 144 62 chr2 105867850 105867989 -147388594 - L1M4 LINE L1 -2238 3908 3595 2373 81 7 3 chr2 105868117 105868415 -147388168 - AluSx SINE Alu -13 299 1 2701 170 17 6 chr2 105868446 105868929 -147387654 + L1MB4 LINE L1 5692 6179 -1 1993 134 10 0 chr2 105869339 105869629 -147386954 - AluSq SINE Alu -20 293 1 2278 94 14 3 chr2 105869629 105869926 -147386657 - AluSq SINE Alu -8 305 6 854 110 24 8 chr2 105870128 105870255 -147386328 - FLAM_C SINE Alu -14 129 1 309 169 0 0 chr2 105870345 105870404 -147386179 + (TATG)n Simple_repeat Simple_repeat 2 60 0 311 238 138 30 chr2 105870421 105870690 -147385893 - L1M4 LINE L1 -3510 2636 2339 1834 143 36 17 chr2 105870700 105871001 -147385582 - AluSc SINE Alu -2 307 1 2007 135 0 14 chr2 105871030 105871360 -147385223 - AluSx SINE Alu 0 326 1 601 252 107 60 chr2 105871406 105871444 -147385139 - HAL1 LINE L1 -24 2483 2448 1826 153 22 29 chr2 105871444 105871758 -147384825 + AluJo SINE Alu 1 312 0 601 252 107 60 chr2 105871758 105871866 -147384717 - HAL1 LINE L1 -59 2448 2347 2049 104 0 53 chr2 105871866 105872165 -147384418 + AluSx SINE Alu 4 286 -26 234 0 0 0 chr2 105872168 105872194 -147384389 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 601 252 107 60 chr2 105872194 105872462 -147384121 - HAL1 LINE L1 -161 2346 2044 1336 226 83 71 chr2 105872523 105872602 -147383981 - HAL1 LINE L1 -867 1640 1563 2316 88 20 3 chr2 105872602 105872908 -147383675 - AluY SINE Alu 0 311 1 1336 226 83 71 chr2 105872908 105873117 -147383466 - HAL1 LINE L1 -944 1563 1358 4155 116 75 63 chr2 105873117 105873893 -147382690 - LTR1 LTR ERV1 0 785 1 1336 226 83 71 chr2 105873893 105874169 -147382414 - HAL1 LINE L1 -1149 1358 1068 971 136 0 14 chr2 105874265 105874412 -147382171 + AluJb SINE Alu 1 145 -167 2188 90 42 3 chr2 105874412 105874700 -147381883 + AluSg SINE Alu 1 299 -11 954 205 11 0 chr2 105874731 105874916 -147381667 + AluJb SINE Alu 120 306 -6 879 252 69 94 chr2 105874927 105875044 -147381539 - HAL1 LINE L1 -1514 993 875 1788 141 59 0 chr2 105875044 105875334 -147381249 - AluJo SINE Alu -5 307 1 879 252 69 94 chr2 105875334 105875767 -147380816 - HAL1 LINE L1 -1632 875 457 541 276 92 62 chr2 105875775 105876112 -147380471 - HAL1 LINE L1 -2114 393 47 1412 128 5 202 chr2 105876150 105876526 -147380057 - AluJo SINE Alu 0 302 1 2211 64 21 0 chr2 105876720 105876756 -147379827 - AluY SINE Alu 0 345 311 186 43 0 0 chr2 105876756 105876779 -147379804 + (TA)n Simple_repeat Simple_repeat 2 24 0 2211 64 21 0 chr2 105876779 105877059 -147379524 - AluY SINE Alu -34 311 1 250 281 7 122 chr2 105877450 105877512 -147379071 + MLT1I LTR MaLR 173 212 -197 2387 83 3 0 chr2 105877512 105877812 -147378771 + AluY SINE Alu 10 310 -1 250 281 7 122 chr2 105877812 105877888 -147378695 + MLT1I LTR MaLR 212 295 -114 2097 123 106 75 chr2 105878133 105878548 -147378035 - MSTA LTR MaLR 0 428 1 306 329 34 27 chr2 105878811 105878957 -147377626 - HAL1 LINE L1 -738 1769 1623 2724 45 0 0 chr2 105879014 105879325 -147377258 + AluY SINE Alu 1 311 0 615 291 71 56 chr2 105879872 105880409 -147376174 - HAL1 LINE L1 -865 1642 1098 898 32 129 8 chr2 105880461 105880585 -147375998 + MER85 DNA T2_type 1 139 0 365 271 45 68 chr2 105880790 105880967 -147375616 - HAL1 LINE L1 -1513 994 822 2270 99 3 3 chr2 105880988 105881282 -147375301 - AluSg SINE Alu -16 294 1 1906 145 3 10 chr2 105881488 105881791 -147374792 - AluSx SINE Alu -11 301 1 2257 97 3 13 chr2 105883778 105884089 -147372494 - AluSp SINE Alu -5 308 1 339 122 24 61 chr2 105885271 105885353 -147371230 - L1MC5 LINE L1 -562 7399 7321 209 336 138 0 chr2 105885465 105885581 -147371002 + MIR3 SINE MIR 37 168 -40 404 232 7 19 chr2 105885693 105885848 -147370735 + (TA)n Simple_repeat Simple_repeat 2 154 0 708 141 209 68 chr2 105885848 105886025 -147370558 - AluJo SINE Alu -25 287 86 425 214 62 9 chr2 105886101 105886213 -147370370 - L1ME3 LINE L1 -2 6160 6043 2091 138 0 3 chr2 105886591 105886896 -147369687 - AluSx SINE Alu -8 304 1 2091 134 10 0 chr2 105888079 105888377 -147368206 + AluSx SINE Alu 1 301 -11 544 345 27 5 chr2 105888395 105888618 -147367965 + MIR SINE MIR 12 239 -23 2130 136 3 0 chr2 105889190 105889500 -147367083 + AluSx SINE Alu 1 311 -1 25 0 0 0 chr2 105889981 105890006 -147366577 + AT_rich Low_complexity Low_complexity 1 25 0 1624 141 68 19 chr2 105890006 105890269 -147366314 - AluJo SINE Alu -26 286 11 2189 119 3 10 chr2 105890321 105890624 -147365959 - AluSx SINE Alu -11 301 1 747 174 8 23 chr2 105890762 105890894 -147365689 + MER44D DNA MER2_type 1 400 -209 688 144 125 46 chr2 105890898 105891049 -147365534 - MSTA LTR MaLR -141 234 83 * 1162 146 30 10 chr2 105891047 105891246 -147365337 + MER44D DNA MER2_type 406 608 -1 2446 95 0 0 chr2 105891419 105891724 -147364859 + AluSg SINE Alu 2 306 -4 622 129 0 69 chr2 105891745 105891861 -147364722 + MLT1C LTR MaLR 1 108 -359 3982 122 11 111 chr2 105891867 105892099 -147364484 - MER50 LTR ERV1 -25 709 456 2253 96 3 3 chr2 105892099 105892400 -147364183 - AluSc SINE Alu -8 301 1 3982 122 11 111 chr2 105892400 105892954 -147363629 - MER50 LTR ERV1 -278 456 1 1465 208 48 12 chr2 105892957 105893294 -147363289 + MLT1C LTR MaLR 119 467 0 2019 103 0 75 chr2 105893330 105893651 -147362932 + AluSx SINE Alu 1 297 -15 2420 67 6 35 chr2 105894269 105894583 -147362000 - AluY SINE Alu -6 305 1 2015 133 65 99 chr2 105894649 105894827 -147361756 + MSTA LTR MaLR 1 183 -245 1696 138 10 69 chr2 105894827 105895132 -147361451 + AluSx SINE Alu 1 287 -25 2015 133 65 99 chr2 105895132 105895396 -147361187 + MSTA LTR MaLR 183 428 0 2302 93 30 0 chr2 105896244 105896546 -147360037 - AluSq SINE Alu -2 311 1 35 24 0 0 chr2 105897454 105897496 -147359087 + AT_rich Low_complexity Low_complexity 1 42 0 1962 143 13 3 chr2 105897578 105897878 -147358705 + AluJb SINE Alu 1 303 -9 1649 161 33 33 chr2 105897920 105898219 -147358364 - AluJo SINE Alu -13 299 1 595 215 80 18 chr2 105898323 105898486 -147358097 + LTR16C LTR ERVL 316 488 -3 270 259 25 0 chr2 105898862 105898943 -147357640 - MIR3 SINE MIR -34 174 92 240 200 0 0 chr2 105899486 105899541 -147357042 + CT-rich Low_complexity Low_complexity 2 56 0 2184 105 0 0 chr2 105899545 105899822 -147356761 - AluSg SINE Alu -33 277 1 2139 110 7 29 chr2 105899838 105900148 -147356435 - AluSx SINE Alu -9 303 1 1295 224 10 85 chr2 105900411 105900800 -147355783 + MLT1A2 LTR MaLR 4 363 -11 194 224 106 47 chr2 105901407 105901492 -147355091 + L2 LINE L2 3197 3286 -27 284 320 49 53 chr2 105901703 105901928 -147354655 + MIR SINE MIR 31 254 -8 2149 103 7 0 chr2 105901933 105902239 -147354344 + AluSx SINE Alu 1 308 0 244 304 48 56 chr2 105902552 105902677 -147353906 + MIR SINE MIR 28 151 -111 381 282 35 14 chr2 105902823 105902965 -147353618 + MER5A DNA MER1_type 6 150 -39 268 263 0 0 chr2 105903908 105903984 -147352599 + C-rich Low_complexity Low_complexity 4 79 0 41 90 0 0 chr2 105904026 105904137 -147352446 + GC_rich Low_complexity Low_complexity 1 111 0 27 0 0 0 chr2 105904229 105904256 -147352327 + GC_rich Low_complexity Low_complexity 1 27 0 266 198 11 55 chr2 105904434 105904525 -147352058 + (CGGG)n Simple_repeat Simple_repeat 4 90 0 24 85 0 0 chr2 105904603 105904662 -147351921 + GC_rich Low_complexity Low_complexity 1 59 0 2089 123 17 13 chr2 105908159 105908460 -147348123 - AluSx SINE Alu -10 302 1 2314 102 0 10 chr2 105908581 105908886 -147347697 + AluSq SINE Alu 3 304 -9 2123 109 0 0 chr2 105909659 105909934 -147346649 + AluSx SINE Alu 29 303 -9 2198 95 10 13 chr2 105910027 105910333 -147346250 + AluSg SINE Alu 1 305 -5 189 0 0 0 chr2 105910817 105910838 -147345745 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 243 0 0 0 chr2 105910837 105910864 -147345719 + (TA)n Simple_repeat Simple_repeat 2 28 0 1670 78 60 0 chr2 105910864 105911081 -147345502 - AluSg/x SINE Alu -8 302 73 249 380 0 0 chr2 105911522 105911601 -147344982 - L2 LINE L2 -36 3277 3199 331 203 163 8 chr2 105911800 105911923 -147344660 - MER5C DNA MER1_type -82 242 101 186 139 28 0 chr2 105912005 105912041 -147344542 - MER5A DNA MER1_type -152 37 1 737 249 140 90 chr2 105912434 105913170 -147343413 - HAL1 LINE L1 -110 2397 1625 239 315 41 55 chr2 105913217 105913363 -147343220 - HAL1 LINE L1 -2044 463 320 1989 146 13 0 chr2 105913496 105913804 -147342779 - AluSx SINE Alu 0 312 1 1238 169 44 64 chr2 105913822 105913976 -147342607 - AluJb SINE Alu -26 286 137 2363 78 0 34 chr2 105913976 105914296 -147342287 - AluY SINE Alu -2 309 1 1238 169 44 64 chr2 105914296 105914390 -147342193 - AluJb SINE Alu -175 137 43 205 183 33 0 chr2 105914605 105914665 -147341918 + (CAA)n Simple_repeat Simple_repeat 2 63 0 1174 259 110 0 chr2 105914893 105915297 -147341286 - L1MB7 LINE L1 0 6184 5735 2244 117 0 0 chr2 105915498 105915798 -147340785 - AluSx SINE Alu -12 300 1 324 328 28 44 chr2 105916768 105916948 -147339635 - L2 LINE L2 -1 3312 3136 1615 133 0 0 chr2 105917625 105917850 -147338733 - AluSx SINE Alu -87 225 1 464 218 256 0 chr2 105918266 105918477 -147338106 - L1MEc LINE L1 -4218 2178 1914 2399 91 0 0 chr2 105918480 105918789 -147337794 - AluY SINE Alu -2 309 1 2084 137 13 0 chr2 105918792 105919091 -147337492 - AluSx SINE Alu -9 303 1 2239 109 0 16 chr2 105919199 105919503 -147337080 - AluSx SINE Alu -13 299 1 2033 127 7 13 chr2 105919609 105919908 -147336675 + AluSx SINE Alu 2 298 -14 2194 110 3 0 chr2 105919909 105920199 -147336384 + AluSx SINE Alu 2 292 -20 1605 226 26 23 chr2 105921312 105921701 -147334882 - MLT1B LTR MaLR 0 390 1 988 181 157 0 chr2 105921778 105921982 -147334601 - MER46A DNA MER2_type 0 236 1 1919 155 46 125 chr2 105922035 105922403 -147334180 + MER1A DNA MER1_type 1 539 0 2483 76 0 0 chr2 105922465 105922767 -147333816 + AluY SINE Alu 9 310 -1 438 228 24 121 chr2 105922879 105923085 -147333498 - MLT1H LTR MaLR 0 549 364 2465 77 3 0 chr2 105924270 105924568 -147332015 + AluSp SINE Alu 1 299 -14 313 300 8 42 chr2 105924642 105924762 -147331821 - MIR SINE MIR -144 118 3 181 85 0 64 chr2 105924857 105924904 -147331679 + (TGGGGG)n Simple_repeat Simple_repeat 5 48 0 207 69 0 0 chr2 105925297 105925326 -147331257 + (T)n Simple_repeat Simple_repeat 1 29 0 1264 173 28 28 chr2 105925496 105925744 -147330839 - AluJo SINE Alu -26 286 39 2027 147 0 0 chr2 105925748 105926041 -147330542 - AluSg SINE Alu -12 298 6 336 305 126 29 chr2 105926553 105926727 -147329856 + MIR SINE MIR 28 218 -44 2348 104 0 0 chr2 105926936 105927233 -147329350 - AluSx SINE Alu -14 298 2 2129 173 30 5 chr2 105927236 105927607 -147328976 + Tigger1 DNA MER2_type 47 426 -1992 1960 132 7 0 chr2 105927607 105927887 -147328696 + AluY SINE Alu 1 282 -29 276 200 308 25 chr2 105928095 105928215 -147328368 - MER5A DNA MER1_type 0 189 36 188 280 11 65 chr2 105928431 105928524 -147328059 - MIR3 SINE MIR -11 197 110 2205 80 3 11 chr2 105929096 105929383 -147327200 + AluSg SINE Alu 1 285 -25 1435 116 46 9 chr2 105929551 105929767 -147326816 - AluSg/x SINE Alu -15 295 72 268 252 29 39 chr2 105929798 105929901 -147326682 - MIR3 SINE MIR -8 200 99 2320 90 0 7 chr2 105930800 105931100 -147325483 - AluSg SINE Alu -12 298 1 184 245 20 0 chr2 105931456 105931505 -147325078 - MER5B DNA MER1_type -1 177 128 206 321 12 0 chr2 105931519 105931603 -147324980 - MER5B DNA MER1_type 0 178 94 1965 138 46 32 chr2 105932254 105932624 -147323959 - THE1C LTR MaLR 0 375 1 252 333 133 31 chr2 105933380 105933605 -147322978 - L3 LINE CR1 -323 1254 1007 214 270 0 16 chr2 105933715 105933778 -147322805 + MIR SINE MIR 86 147 -61 212 239 84 14 chr2 105934118 105934189 -147322394 + MER5B DNA MER1_type 97 172 -6 1395 183 114 19 chr2 105934193 105934510 -147322073 + MER7A DNA MER2_type 2 346 0 419 292 20 41 chr2 105934541 105934736 -147321847 + L1MC5 LINE L1 7723 7913 -48 213 119 0 0 chr2 105934752 105934794 -147321789 + (A)n Simple_repeat Simple_repeat 1 42 0 2418 148 76 2 chr2 105936153 105936546 -147320037 - MSTC LTR MaLR -2 426 5 2261 104 0 0 chr2 105937051 105937340 -147319243 + AluSx SINE Alu 1 289 -23 727 185 20 26 chr2 105937597 105937748 -147318835 - MER5A DNA MER1_type -32 157 8 2053 119 3 26 chr2 105937880 105938182 -147318401 - AluSx SINE Alu -16 296 2 257 0 30 0 chr2 105938434 105938467 -147318116 + (GA)n Simple_repeat Simple_repeat 2 35 0 * 270 0 0 0 chr2 105938466 105938496 -147318087 + (TG)n Simple_repeat Simple_repeat 2 31 0 494 243 72 26 chr2 105938729 105938881 -147317702 - MER112 DNA MER1_type -101 159 1 2230 90 10 0 chr2 105940130 105940418 -147316165 + AluY SINE Alu 1 291 -20 2201 123 3 0 chr2 105940605 105940913 -147315670 - AluSx SINE Alu -3 309 1 21 0 0 0 chr2 105940918 105940939 -147315644 + AT_rich Low_complexity Low_complexity 1 21 0 1703 174 31 3 chr2 105940974 105941267 -147315316 + AluJb SINE Alu 1 301 -11 23 33 0 0 chr2 105941597 105941627 -147314956 + AT_rich Low_complexity Low_complexity 1 30 0 2309 84 3 17 chr2 105942085 105942383 -147314200 - AluSc SINE Alu -15 294 1 302 261 11 23 chr2 105942878 105942966 -147313617 - MIR SINE MIR -85 123 37 274 274 118 10 chr2 105943315 105943417 -147313166 + MIR SINE MIR 18 130 -78 324 0 0 0 chr2 105946923 105946959 -147309624 + (TA)n Simple_repeat Simple_repeat 2 37 0 225 0 0 0 chr2 105946959 105946984 -147309599 + (T)n Simple_repeat Simple_repeat 1 25 0 217 297 27 0 chr2 105947466 105947540 -147309043 - MIR SINE MIR -140 122 47 301 276 62 28 chr2 105948305 105948450 -147308133 + MIR SINE MIR 60 209 -53 2836 3 0 3 chr2 105949648 105949950 -147306633 - AluYa5 SINE Alu -10 301 1 236 304 49 29 chr2 105950459 105950561 -147306022 - MIR SINE MIR -110 152 49 2680 43 0 3 chr2 105950661 105950964 -147305619 - AluY SINE Alu -9 302 1 573 205 55 8 chr2 105951089 105951216 -147305367 + Charlie1 DNA MER1_type 2629 2761 0 364 280 108 27 chr2 105951219 105951405 -147305178 + MIR SINE MIR 12 212 -50 23 54 0 0 chr2 105952477 105952514 -147304069 + AT_rich Low_complexity Low_complexity 1 37 0 2254 120 0 0 chr2 105953153 105953453 -147303130 - AluSx SINE Alu -12 300 1 857 206 118 24 chr2 105953644 105953940 -147302643 - MER33 DNA MER1_type 0 324 1 180 0 0 0 chr2 105954934 105954954 -147301629 + (A)n Simple_repeat Simple_repeat 1 20 0 315 0 0 0 chr2 105955468 105955503 -147301080 + (TG)n Simple_repeat Simple_repeat 2 36 0 1514 204 15 0 chr2 105955512 105955782 -147300801 - AluJo SINE Alu -38 274 1 21 0 0 0 chr2 105955785 105955806 -147300777 + AT_rich Low_complexity Low_complexity 1 21 0 2188 117 3 0 chr2 105956604 105956913 -147299670 - AluSx SINE Alu -2 310 1 1798 165 3 35 chr2 105958022 105958162 -147298421 + AluJb SINE Alu 1 144 -168 10762 25 1 1 chr2 105958162 105960170 -147296413 + L1PA2 LINE L1 4148 6155 0 1798 165 3 35 chr2 105960170 105960345 -147296238 + AluJb SINE Alu 144 306 -6 182 195 58 69 chr2 105960883 105960970 -147295613 + MIR SINE MIR 59 144 -118 196 316 95 11 chr2 105962164 105962259 -147294324 - MIR SINE MIR -114 148 46 570 254 18 55 chr2 105962511 105962728 -147293855 - MIR SINE MIR 0 262 54 2247 131 0 6 chr2 105963837 105964149 -147292434 - AluSx SINE Alu -2 310 1 2409 79 0 16 chr2 105965425 105965740 -147290843 - AluY SINE Alu -1 310 1 1717 177 6 38 chr2 105966045 105966362 -147290221 - AluJb SINE Alu -5 307 1 1789 127 79 16 chr2 105967063 105967233 -147289350 - MER44D DNA MER2_type -1886 605 447 2031 125 10 23 chr2 105967233 105967538 -147289045 + AluSx SINE Alu 1 301 -11 1789 127 79 16 chr2 105967538 105967682 -147288901 - MER44D DNA MER2_type -2044 447 1 1136 195 25 17 chr2 105967868 105968104 -147288479 - MER8 DNA MER2_type -1 238 1 2717 42 0 0 chr2 105968347 105968653 -147287930 + AluY SINE Alu 1 306 -5 772 50 0 109 chr2 105968968 105969169 -147287414 + (TCCCC)n Simple_repeat Simple_repeat 1 179 0 350 204 49 6 chr2 105969802 105969964 -147286619 + C-rich Low_complexity Low_complexity 4 172 0 1715 170 0 7 chr2 105969982 105970259 -147286324 - AluSx SINE Alu -32 280 6 22 0 0 30 chr2 105970313 105970327 -147286256 + AT_rich Low_complexity Low_complexity 1 14 -18 2310 108 0 0 chr2 105970327 105970623 -147285960 + AluSc SINE Alu 1 296 -13 22 0 0 30 chr2 105970623 105970641 -147285942 + AT_rich Low_complexity Low_complexity 14 32 0 282 116 0 0 chr2 105970641 105970684 -147285899 + (TG)n Simple_repeat Simple_repeat 2 44 0 2263 86 3 0 chr2 105970840 105971130 -147285453 + AluSp SINE Alu 1 291 -22 22 35 0 0 chr2 105971422 105971451 -147285132 + AT_rich Low_complexity Low_complexity 1 29 0 2174 110 13 16 chr2 105971666 105971975 -147284608 - AluSq SINE Alu -5 308 1 233 262 65 28 chr2 105972119 105972226 -147284357 + MIR SINE MIR 78 188 -74 257 261 27 36 chr2 105975188 105975299 -147281284 + L1MC4a LINE L1 7425 7519 -289 1619 141 21 0 chr2 105975491 105975732 -147280851 - AluJb SINE Alu -55 257 12 315 281 70 55 chr2 105975739 105975938 -147280645 + L1MC4 LINE L1 7841 8042 0 26 0 0 0 chr2 105976076 105976102 -147280481 + AT_rich Low_complexity Low_complexity 1 26 0 2655 111 3 0 chr2 105976902 105977262 -147279321 - MER51A LTR ERV1 0 634 274 2401 91 7 0 chr2 105979702 105980000 -147276583 - AluSx SINE Alu -12 300 1 2144 84 0 87 chr2 105980359 105980692 -147275891 - AluSq SINE Alu -5 308 5 7092 95 37 7 chr2 105983574 105984736 -147271847 - L1MA2 LINE L1 -7 6297 5101 359 226 76 52 chr2 105984771 105984930 -147271653 - L1MD2 LINE L1 -2 6164 6009 180 0 0 0 chr2 105985154 105985174 -147271409 + (T)n Simple_repeat Simple_repeat 1 20 0 291 169 31 0 chr2 105985664 105985729 -147270854 - L2 LINE L2 -2 3270 3204 307 248 32 16 chr2 105985821 105985946 -147270637 - MER94 DNA DNA -2 132 6 307 254 69 20 chr2 105986242 105986341 -147270242 - MER5A DNA MER1_type -26 163 45 355 269 48 28 chr2 105986481 105986626 -147269957 - Charlie8 DNA MER1_type -2152 265 118 26 0 0 0 chr2 105987036 105987062 -147269521 + AT_rich Low_complexity Low_complexity 1 26 0 273 285 64 112 chr2 105987642 105987937 -147268646 + L2 LINE L2 2996 3276 -37 193 200 89 0 chr2 105987992 105988037 -147268546 - MIR SINE MIR -95 113 65 394 283 7 29 chr2 105988988 105989126 -147267457 + MIR SINE MIR 13 147 -115 1785 179 83 24 chr2 105991481 105991855 -147264728 - MSTD LTR MaLR 0 396 1 346 269 77 39 chr2 105993573 105993703 -147262880 - MER5A DNA MER1_type -1 188 54 393 22 0 0 chr2 105994383 105994429 -147262154 + (TG)n Simple_repeat Simple_repeat 2 47 0 364 225 139 23 chr2 105994968 105995097 -147261486 + MIR SINE MIR 69 212 -50 452 62 16 0 chr2 105995780 105995844 -147260739 + (TC)n Simple_repeat Simple_repeat 2 66 0 2239 113 3 3 chr2 105995850 105996160 -147260423 - AluSx SINE Alu -2 310 1 2360 97 0 0 chr2 105997840 105998139 -147258444 - AluSx SINE Alu -13 299 1 404 267 146 12 chr2 105999405 105999570 -147257013 - MIR SINE MIR -18 244 58 23 54 0 0 chr2 106001456 106001493 -147255090 + AT_rich Low_complexity Low_complexity 1 37 0 354 45 0 0 chr2 106002620 106002664 -147253919 + (TCC)n Simple_repeat Simple_repeat 1 44 0 2047 141 7 0 chr2 106002664 106002969 -147253614 - AluSx SINE Alu -5 307 1 227 302 0 0 chr2 106002983 106003046 -147253537 - L1ME4a LINE L1 -110 6011 5949 180 0 0 0 chr2 106003604 106003624 -147252959 + (T)n Simple_repeat Simple_repeat 1 20 0 434 183 130 26 chr2 106004228 106004343 -147252240 - L1MD2 LINE L1 -16 6343 6217 498 244 88 76 chr2 106004733 106005789 -147250794 - L1MC5 LINE L1 -367 7594 6698 598 227 172 12 chr2 106006247 106006410 -147250173 + MER5A DNA MER1_type 1 189 0 300 325 42 25 chr2 106006436 106006556 -147250027 - MIR3 SINE MIR -52 156 35 27 0 0 0 chr2 106007691 106007718 -147248865 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr2 106007774 106007802 -147248781 + AT_rich Low_complexity Low_complexity 1 28 0 457 152 94 129 chr2 106007856 106007916 -147248667 - MER106B DNA MER1_type 0 1059 998 1469 150 27 93 chr2 106007916 106008249 -147248334 - AluJo SINE Alu -1 311 1 457 152 94 129 chr2 106008249 106008359 -147248224 - MER106B DNA MER1_type -61 998 895 203 286 18 18 chr2 106008547 106008603 -147247980 - MIR SINE MIR -68 140 85 349 226 142 0 chr2 106009241 106009347 -147247236 + MIR SINE MIR 119 239 -23 1657 170 6 22 chr2 106009622 106009939 -147246644 - AluJb SINE Alu 0 312 1 22 0 0 0 chr2 106010155 106010177 -147246406 + AT_rich Low_complexity Low_complexity 1 22 0 1549 168 125 0 chr2 106010177 106010433 -147246150 - AluJo SINE Alu -14 288 1 242 255 0 0 chr2 106010435 106010482 -147246101 - MARNA DNA Mariner -403 183 137 2254 216 93 8 chr2 106011259 106011755 -147244828 - MER68 LTR ERV1 0 562 25 804 276 35 35 chr2 106011765 106012051 -147244532 + L2 LINE L2 2254 2539 -775 745 270 128 58 chr2 106012194 106012828 -147243755 + L2 LINE L2 2531 3233 -80 2302 96 0 0 chr2 106012828 106013121 -147243462 - AluSq SINE Alu -20 293 1 745 270 128 58 chr2 106013121 106013203 -147243380 + L2 LINE L2 3233 3308 -5 444 105 0 0 chr2 106013281 106013357 -147243226 + (TG)n Simple_repeat Simple_repeat 1 76 0 2152 105 24 0 chr2 106014835 106015131 -147241452 + AluSg SINE Alu 1 303 -7 1546 218 46 19 chr2 106015140 106015512 -147241071 - L1ME3A LINE L1 0 6170 5789 2290 92 0 13 chr2 106016410 106016713 -147239870 - AluSg SINE Alu -11 299 1 1613 159 9 71 chr2 106017074 106017400 -147239183 - AluJo SINE Alu -4 308 3 2035 139 43 130 chr2 106017591 106018060 -147238523 - MSTA LTR MaLR 0 428 1 228 209 0 0 chr2 106018612 106018655 -147237928 + L1MB7 LINE L1 6132 6174 -10 265 305 0 47 chr2 106018733 106018861 -147237722 - L1ME4a LINE L1 -58 6063 5942 25 95 0 0 chr2 106020365 106020439 -147236144 + AT_rich Low_complexity Low_complexity 1 74 0 2384 73 3 3 chr2 106021127 106021430 -147235153 + AluSc SINE Alu 1 303 -6 2163 66 36 7 chr2 106022881 106023175 -147233408 + AluY SINE Alu 1 302 0 23 33 0 0 chr2 106025223 106025253 -147231330 + AT_rich Low_complexity Low_complexity 1 30 0 2281 246 96 18 chr2 106025503 106026341 -147230242 - L1MEc LINE L1 -5479 917 15 21 36 0 0 chr2 106028088 106028116 -147228467 + AT_rich Low_complexity Low_complexity 1 28 0 5602 136 145 28 chr2 106031324 106032425 -147224158 - Tigger3b DNA MER2_type -1 1230 1 391 167 99 0 chr2 106033614 106033713 -147222870 - MIR SINE MIR -67 141 42 22 80 0 0 chr2 106036252 106036302 -147220281 + AT_rich Low_complexity Low_complexity 1 50 0 21 36 0 0 chr2 106036385 106036413 -147220170 + AT_rich Low_complexity Low_complexity 1 28 0 343 279 122 69 chr2 106036664 106036911 -147219672 + MIR SINE MIR 2 261 -1 645 326 78 19 chr2 106039791 106040110 -147216473 + L2 LINE L2 2632 2969 -345 285 274 134 43 chr2 106040170 106040356 -147216227 + L2 LINE L2 3097 3299 -14 302 275 90 78 chr2 106042765 106042932 -147213651 - L1MC4 LINE L1 -380 7662 7494 2568 60 0 0 chr2 106043374 106043675 -147212908 + AluY SINE Alu 1 301 -10 256 323 0 43 chr2 106043696 106043789 -147212794 - L2 LINE L2 -38 3275 3187 425 135 9 36 chr2 106044181 106044292 -147212291 + CT-rich Low_complexity Low_complexity 2 109 0 290 128 0 0 chr2 106045087 106045134 -147211449 + L2 LINE L2 3266 3312 -1 330 273 27 27 chr2 106045533 106045643 -147210940 - MIR SINE MIR -22 240 131 2281 84 0 13 chr2 106046337 106046647 -147209936 + AluSp SINE Alu 1 306 -7 23 0 0 0 chr2 106046710 106046733 -147209850 + AT_rich Low_complexity Low_complexity 1 23 0 262 266 193 18 chr2 106048218 106048327 -147208256 - MER5B DNA MER1_type -28 150 23 205 312 108 86 chr2 106048898 106049167 -147207416 - L2 LINE L2 -2 3270 2996 2122 131 0 10 chr2 106051497 106051802 -147204781 - AluSg SINE Alu -8 302 1 770 92 84 0 chr2 106054827 106054993 -147201590 + L1PA10 LINE L1 6006 6182 0 620 219 121 14 chr2 106054993 106055208 -147201375 + MLT1C LTR MaLR 184 421 -46 27 0 0 0 chr2 106055208 106055235 -147201348 + AT_rich Low_complexity Low_complexity 1 27 0 2061 130 34 0 chr2 106055425 106055748 -147200835 - MER7A DNA MER2_type 0 346 15 1307 177 108 22 chr2 106056937 106057062 -147199521 + MER2 DNA MER2_type 2 115 -230 6222 131 85 22 chr2 106057062 106058219 -147198364 + Tigger3b DNA MER2_type 2 1231 0 1307 177 108 22 chr2 106058219 106058409 -147198174 + MER2 DNA MER2_type 115 344 -1 1830 148 0 20 chr2 106059166 106059464 -147197119 - AluJb SINE Alu -20 292 1 279 322 127 17 chr2 106059490 106059782 -147196801 - L3 LINE CR1 -609 968 645 730 173 8 30 chr2 106059785 106059918 -147196665 + FLAM_C SINE Alu 3 132 -1 288 0 0 0 chr2 106061760 106061792 -147194791 + (T)n Simple_repeat Simple_repeat 1 32 0 969 253 126 104 chr2 106062912 106063753 -147192830 + HAL1 LINE L1 532 1410 -1097 195 42 0 0 chr2 106063753 106063777 -147192806 + (CATA)n Simple_repeat Simple_repeat 4 27 0 969 253 126 104 chr2 106063777 106064140 -147192443 + HAL1 LINE L1 1410 1763 -744 250 293 38 25 chr2 106064180 106064337 -147192246 + HAL1 LINE L1 1906 2064 -443 791 207 35 6 chr2 106064901 106065075 -147191508 - MER3 DNA MER1_type -15 194 16 610 228 67 76 chr2 106065262 106065486 -147191097 + MIR SINE MIR 14 235 -27 201 210 0 113 chr2 106065456 106065518 -147191065 + L2 LINE L2 3210 3264 -8 * 211 259 0 47 chr2 106065585 106065670 -147190913 + CT-rich Low_complexity Low_complexity 3 83 0 276 239 12 46 chr2 106066016 106066174 -147190409 + GA-rich Low_complexity Low_complexity 5 246 0 202 255 0 20 chr2 106066250 106066301 -147190282 + (CATATA)n Simple_repeat Simple_repeat 3 52 0 21 57 0 0 chr2 106066510 106066545 -147190038 + AT_rich Low_complexity Low_complexity 1 35 0 217 336 64 9 chr2 106068155 106068265 -147188318 - MIR SINE MIR -63 145 30 346 331 8 25 chr2 106069969 106070090 -147186493 - MIR3 SINE MIR -18 190 72 2129 119 3 22 chr2 106071992 106072304 -147184279 + AluSx SINE Alu 5 310 -2 27 29 0 0 chr2 106074131 106074165 -147182418 + AT_rich Low_complexity Low_complexity 1 34 0 639 198 47 66 chr2 106075521 106075733 -147180850 - MER3 DNA MER1_type 0 209 2 292 224 60 51 chr2 106076791 106076929 -147179654 - MIR SINE MIR -18 244 23 29 90 0 0 chr2 106079066 106079144 -147177439 + AT_rich Low_complexity Low_complexity 1 78 0 210 128 0 0 chr2 106081622 106081661 -147174922 + (TCC)n Simple_repeat Simple_repeat 1 39 0 538 75 0 96 chr2 106084538 106084632 -147171951 - L1PB4 LINE L1 -34 6122 6038 1436 73 0 0 chr2 106087512 106087689 -147168894 - AluSc SINE Alu -12 297 121 2286 92 0 0 chr2 106087773 106088084 -147168499 - AluY SINE Alu 0 311 1 1122 159 0 0 chr2 106089085 106089255 -147167328 + AluJb SINE Alu 138 307 -5 378 226 190 9 chr2 106089353 106089574 -147167009 - L1ME4a LINE L1 -11 6110 5850 506 236 102 37 chr2 106089606 106089852 -147166731 - L1ME3A LINE L1 -12 6158 5897 4391 210 47 52 chr2 106089904 106090547 -147166036 - L1ME3A LINE L1 -753 5393 4748 2211 119 0 0 chr2 106090547 106090840 -147165743 - AluSg SINE Alu -15 295 3 4391 210 47 52 chr2 106090840 106091865 -147164718 - L1ME3A LINE L1 -1398 4748 3849 963 244 135 30 chr2 106091882 106092415 -147164168 - L1ME4a LINE L1 -323 5847 5259 21 0 0 0 chr2 106092560 106092581 -147164002 + AT_rich Low_complexity Low_complexity 1 21 0 1293 92 0 6 chr2 106093373 106093536 -147163047 - AluSq SINE Alu -19 294 133 649 241 39 25 chr2 106094207 106094410 -147162173 - MER3 DNA MER1_type -3 206 1 248 195 0 78 chr2 106095104 106095181 -147161402 + L3 LINE CR1 660 730 -847 2381 49 56 0 chr2 106096795 106097080 -147159503 + AluY SINE Alu 1 301 -10 34 55 0 0 chr2 106098709 106098764 -147157819 + AT_rich Low_complexity Low_complexity 1 55 0 2087 122 0 3 chr2 106100487 106100790 -147155793 - AluSg1 SINE Alu -7 302 1 1729 119 130 0 chr2 106100790 106101059 -147155524 - AluSg SINE Alu -6 304 1 384 77 0 0 chr2 106102023 106102075 -147154508 + (A)n Simple_repeat Simple_repeat 1 52 0 192 111 0 0 chr2 106105628 106105664 -147150919 + (A)n Simple_repeat Simple_repeat 1 36 0 1329 204 21 40 chr2 106106569 106106946 -147149637 - L1MB8 LINE L1 0 6178 5809 1758 168 110 0 chr2 106108462 106108790 -147147793 - THE1B LTR MaLR 0 364 1 23 0 0 0 chr2 106109234 106109257 -147147326 + AT_rich Low_complexity Low_complexity 1 23 0 481 191 112 37 chr2 106109626 106109814 -147146769 - MER33 DNA MER1_type -97 227 26 231 318 122 34 chr2 106109828 106109976 -147146607 - MIR SINE MIR -54 208 48 234 286 57 14 chr2 106111224 106111294 -147145289 - L2 LINE L2 -1 3271 3199 815 191 36 6 chr2 106111480 106111648 -147144935 - MER5A DNA MER1_type -3 186 14 1652 172 36 33 chr2 106112123 106112512 -147144071 + MLT1B LTR MaLR 1 390 0 676 230 125 17 chr2 106112982 106113334 -147143249 - L1MC5 LINE L1 -49 7912 7523 822 226 39 53 chr2 106113359 106113642 -147142941 - L1MC5 LINE L1 -1050 6911 6633 1901 144 3 10 chr2 106113643 106114013 -147142570 - AluJb SINE Alu 0 368 1 229 281 205 23 chr2 106114370 106114672 -147141911 - L1MC4a LINE L1 -1639 6169 5813 302 232 40 40 chr2 106114683 106114782 -147141801 - L1MB8 LINE L1 -16 6162 6064 1215 229 125 12 chr2 106114857 106115258 -147141325 - L1MC4a LINE L1 -1997 5811 5366 4025 98 23 27 chr2 106115558 106115982 -147140601 + MER51C LTR ERV1 1 425 -215 2524 110 8 24 chr2 106115982 106116363 -147140220 - THE1C LTR MaLR 0 375 1 10435 115 28 12 chr2 106116363 106117918 -147138665 - THE1C-int LTR MaLR 0 1580 1 2518 79 71 8 chr2 106117918 106118271 -147138312 - THE1C LTR MaLR 0 375 1 4025 98 23 27 chr2 106118271 106118504 -147138079 + MER51C LTR ERV1 422 640 0 548 315 76 40 chr2 106118524 106118997 -147137586 - L1MC4a LINE L1 -913 5233 4744 25 0 0 0 chr2 106119116 106119141 -147137442 + AT_rich Low_complexity Low_complexity 1 25 0 414 238 25 0 chr2 106119185 106119307 -147137276 - L1MB7 LINE L1 -5 6161 6045 1141 244 36 23 chr2 106119863 106120248 -147136335 - HAL1 LINE L1 -590 1917 1528 338 320 50 28 chr2 106120488 106120669 -147135914 - HAL1 LINE L1 -1265 1242 1058 228 274 97 9 chr2 106121433 106121546 -147135037 + L1MDa LINE L1 790 912 -5484 308 264 11 11 chr2 106121565 106121652 -147134931 + L1MDa LINE L1 921 1007 -5198 1829 114 72 4 chr2 106121669 106121981 -147134602 + AluSg1 SINE Alu 1 330 0 4576 159 27 18 chr2 106121999 106122950 -147133633 + L1MB2 LINE L1 5194 6153 -18 441 263 45 87 chr2 106122950 106123331 -147133252 + L1MDa LINE L1 1002 1402 -4849 2426 166 44 42 chr2 106123341 106123889 -147132694 - L1MC2 LINE L1 -363 5981 5433 1165 290 34 5 chr2 106123883 106124328 -147132255 - L1M4 LINE L1 -1755 4391 3934 * 1048 221 64 65 chr2 106124327 106124861 -147131722 + L1MDa LINE L1 3049 3581 -2634 * 309 229 24 36 chr2 106124861 106124944 -147131639 + L1MD2 LINE L1 2343 2424 -4116 324 213 58 58 chr2 106125027 106125188 -147131395 + L1MD2 LINE L1 2419 2582 -3958 1874 124 4 0 chr2 106125188 106125447 -147131136 + AluSq SINE Alu 1 260 -53 324 213 58 58 chr2 106125447 106125459 -147131124 + L1MD2 LINE L1 2581 2592 -3948 379 111 32 0 chr2 106125525 106125588 -147130995 + Tigger2 DNA MER2_type 1 65 -2653 * 2395 134 48 14 chr2 106125579 106126013 -147130570 + Tigger2 DNA MER2_type 2270 2718 0 2967 247 28 39 chr2 106126027 106127307 -147129276 + L1MD2 LINE L1 2629 3894 -2646 * 3700 214 60 27 chr2 106127305 106129327 -147127256 + L1MD2 LINE L1 4666 6751 -2 1369 254 118 11 chr2 106129322 106130042 -147126541 + L1MDa LINE L1 4385 5181 -1034 * 1902 142 3 16 chr2 106130895 106131204 -147125379 - AluSx SINE Alu -5 307 3 1652 183 0 10 chr2 106131985 106132275 -147124308 + AluJo SINE Alu 5 291 -21 751 151 0 16 chr2 106132281 106132407 -147124176 + FLAM_C SINE Alu 1 124 -19 265 236 97 30 chr2 106133547 106133712 -147122871 + L1ME4a LINE L1 5946 6121 0 895 158 154 5 chr2 106133751 106134064 -147122519 + MSTA LTR MaLR 1 428 0 9078 145 38 12 chr2 106134065 106135671 -147120912 + MSTA-int LTR MaLR 2 1645 -6 2246 134 123 8 chr2 106135676 106136057 -147120526 + MSTA LTR MaLR 1 425 -3 337 260 127 62 chr2 106136079 106136320 -147120263 + MLT1L LTR MaLR 41 265 -350 1814 133 90 31 chr2 106136320 106136674 -147119909 + THE1C LTR MaLR 1 375 0 9373 143 24 36 chr2 106136676 106138274 -147118309 + THE1C-int LTR MaLR 3 1580 0 1765 153 91 26 chr2 106138274 106138626 -147117957 + THE1C LTR MaLR 1 375 0 337 260 127 62 chr2 106138626 106138672 -147117911 + MLT1L LTR MaLR 264 351 -264 253 300 249 39 chr2 106139869 106140206 -147116377 - L3 LINE CR1 -731 846 439 495 123 12 0 chr2 106140554 106140635 -147115948 - L1PA15 LINE L1 0 6165 6084 275 298 118 44 chr2 106140659 106141021 -147115562 - L1M4 LINE L1 -2396 3750 3416 2017 146 23 0 chr2 106141021 106141323 -147115260 - AluSx SINE Alu -3 309 1 275 298 118 44 chr2 106141323 106141604 -147114979 - L1M4 LINE L1 -2730 3416 3157 1701 199 77 25 chr2 106141604 106142046 -147114537 + MLT1C LTR MaLR 1 465 -2 275 298 118 44 chr2 106142046 106142424 -147114159 - L1M4 LINE L1 -2989 3157 2652 21 0 0 0 chr2 106142544 106142565 -147114018 + AT_rich Low_complexity Low_complexity 1 21 0 268 191 0 0 chr2 106142565 106142628 -147113955 - L1MD2 LINE L1 -3 6356 6294 3028 258 62 72 chr2 106142635 106144062 -147112521 + L1M4 LINE L1 2 1413 -5129 849 154 7 0 chr2 106144062 106144178 -147112405 + AluJo SINE Alu 1 120 -192 183 42 0 0 chr2 106144178 106144202 -147112381 + (TAA)n Simple_repeat Simple_repeat 1 24 0 849 154 7 0 chr2 106144202 106144221 -147112362 + AluJo SINE Alu 120 137 -175 2216 240 47 12 chr2 106144221 106144800 -147111783 + L1M4 LINE L1 1390 1988 -4658 2410 228 9 15 chr2 106144802 106145385 -147111198 + L1 LINE L1 3579 4157 -1989 29679 113 17 70 chr2 106145426 106150655 -147105928 + L1P LINE L1 12 4965 -1181 961 103 0 0 chr2 106150657 106150783 -147105800 - THE1A LTR MaLR -229 126 1 1350 271 89 26 chr2 106150793 106151288 -147105295 - L1MDb LINE L1 -5241 1302 777 946 235 36 71 chr2 106151587 106151923 -147104660 - L1MDb LINE L1 -6196 344 21 1369 237 45 32 chr2 106151970 106152357 -147104226 - L1ME3A LINE L1 -9 6161 5771 2348 86 0 3 chr2 106152357 106152659 -147103924 - AluY SINE Alu -10 301 1 1369 237 45 32 chr2 106152659 106152714 -147103869 - L1ME3A LINE L1 -399 5771 5718 2270 234 16 14 chr2 106152778 106153278 -147103305 + MLT1D LTR MaLR 3 503 -2 1023 238 29 4 chr2 106153386 106153626 -147102957 - MER77 LTR ERV1 0 605 360 2360 102 0 0 chr2 106153858 106154161 -147102422 - AluSx SINE Alu -9 303 1 602 242 0 43 chr2 106155077 106155238 -147101345 + MIR SINE MIR 3 156 -106 538 304 162 12 chr2 106155248 106155476 -147101107 + L2 LINE L2 818 1010 -2304 2317 89 7 0 chr2 106155476 106155769 -147100814 - AluY SINE Alu -16 295 1 538 304 162 12 chr2 106155769 106155965 -147100618 + L2 LINE L2 1010 1306 -2008 789 189 7 7 chr2 106156119 106156394 -147100189 + MLT1A1 LTR MaLR 1 365 0 2262 143 19 11 chr2 106158054 106158426 -147098157 - THE1C LTR MaLR 0 375 1 830 207 47 5 chr2 106159356 106159549 -147097034 - MIR SINE MIR -28 234 34 30 0 0 0 chr2 106159687 106159717 -147096866 + AT_rich Low_complexity Low_complexity 1 30 0 304 223 111 45 chr2 106159927 106160214 -147096369 + L1MB8 LINE L1 5282 5609 -553 2684 155 32 50 chr2 106160214 106160553 -147096030 + L1MA8 LINE L1 5725 6069 -222 2038 132 0 0 chr2 106160553 106160833 -147095750 - AluSx SINE Alu -32 280 1 2684 155 32 50 chr2 106160833 106160901 -147095682 + L1MA8 LINE L1 6069 6137 -154 1841 84 4 0 chr2 106160901 106161138 -147095445 + AluSg/x SINE Alu 70 307 -3 2684 155 32 50 chr2 106161138 106161283 -147095300 + L1MA8 LINE L1 6137 6268 -23 316 300 120 20 chr2 106161311 106161511 -147095072 + L1MB8 LINE L1 5600 5819 -302 2097 230 96 12 chr2 106161562 106162135 -147094448 - L1MC4 LINE L1 0 8042 7422 2750 135 13 55 chr2 106162146 106162687 -147093896 - L1MB8 LINE L1 -63 6115 5598 1440 204 76 40 chr2 106162692 106163088 -147093495 - MLT2D LTR ERVL 0 414 5 446 103 0 39 chr2 106163090 106163168 -147093415 + Alu SINE Alu 236 310 0 313 216 21 41 chr2 106164568 106164665 -147091918 + L1MB8 LINE L1 5963 6057 -121 308 261 43 9 chr2 106164800 106164915 -147091668 - HAL1 LINE L1 -394 2113 1995 616 321 85 16 chr2 106165070 106165316 -147091267 + MER115 DNA AcHobo 15 277 -416 395 287 30 48 chr2 106165388 106165542 -147091041 + MER115 DNA AcHobo 290 440 -253 316 128 0 0 chr2 106165542 106165589 -147090994 - MLT2C2 LTR ERVL -1 463 417 609 172 0 0 chr2 106165589 106165711 -147090872 + (TCTCTG)n Simple_repeat Simple_repeat 4 125 0 390 20 20 0 chr2 106165711 106165761 -147090822 + (TCTA)n Simple_repeat Simple_repeat 3 53 0 2284 160 85 11 chr2 106165761 106166198 -147090385 - MLT2B1 LTR ERVL -51 469 1 962 217 72 13 chr2 106166198 106166433 -147090150 + MER115 DNA AcHobo 443 691 -2 1108 199 205 12 chr2 106166505 106166842 -147089741 - MLT1H LTR MaLR -2 547 146 366 162 29 0 chr2 106166842 106166910 -147089673 + L1MB7 LINE L1 6062 6131 -53 770 214 25 0 chr2 106166916 106167075 -147089508 + L1MC4 LINE L1 7422 7584 -458 266 291 35 0 chr2 106167387 106167473 -147089110 - HAL1 LINE L1 -756 1751 1663 1314 259 80 60 chr2 106167478 106167964 -147088619 + MER77 LTR ERV1 127 598 -7 409 264 57 114 chr2 106168098 106168378 -147088205 - HAL1 LINE L1 -1503 1004 741 196 303 56 34 chr2 106170462 106170551 -147086032 - MIR3 SINE MIR -30 178 88 2162 103 13 17 chr2 106170667 106170968 -147085615 + AluSx SINE Alu 1 300 -12 265 316 44 13 chr2 106171722 106171880 -147084703 + MIR SINE MIR 63 225 -37 357 225 0 0 chr2 106172618 106172707 -147083876 + (TG)n Simple_repeat Simple_repeat 1 89 0 3773 145 55 7 chr2 106173722 106174396 -147082187 - MER67C LTR ERV1 -4 706 1 372 22 0 0 chr2 106175207 106175252 -147081331 + (GA)n Simple_repeat Simple_repeat 2 46 0 394 240 41 34 chr2 106175334 106175480 -147081103 + MER5A DNA MER1_type 37 183 -6 2123 117 0 0 chr2 106175814 106176130 -147080453 + AluSx SINE Alu 1 316 0 328 312 48 21 chr2 106176645 106176831 -147079752 - MIR SINE MIR -27 235 45 1311 187 29 0 chr2 106178303 106178544 -147078039 - MER89 LTR ERV1 0 559 312 2600 142 31 5 chr2 106178547 106178962 -147077621 - MSTB LTR MaLR 0 426 1 8591 188 35 5 chr2 106178973 106180560 -147076023 - MSTB-int LTR MaLR -14 1637 3 2843 124 19 5 chr2 106180562 106180982 -147075601 - MSTB LTR MaLR 0 426 1 981 189 108 71 chr2 106180987 106181284 -147075299 - MER89 LTR ERV1 -251 308 1 1004 222 101 36 chr2 106181403 106181790 -147074793 + LTR37A LTR ERV1 14 425 -1 360 0 0 0 chr2 106181790 106181830 -147074753 + (TG)n Simple_repeat Simple_repeat 2 41 0 4528 76 3 5 chr2 106182166 106182748 -147073835 - LTR10C LTR ERV1 0 591 11 628 151 28 0 chr2 106183530 106183636 -147072947 + MER89 LTR ERV1 1 109 -450 2451 189 16 8 chr2 106183698 106183966 -147072617 + MER89 LTR ERV1 69 344 -215 3621 137 45 35 chr2 106183966 106184603 -147071980 - LTR48B LTR ERV1 0 644 1 2451 189 16 8 chr2 106184603 106184821 -147071762 + MER89 LTR ERV1 344 559 0 2025 217 74 39 chr2 106185277 106185415 -147071168 - L1MC4 LINE L1 -3 8039 7907 305 47 23 0 chr2 106185415 106185458 -147071125 + (TG)n Simple_repeat Simple_repeat 2 45 0 2025 217 74 39 chr2 106185458 106185531 -147071052 - L1MC4 LINE L1 -135 7907 7838 2058 145 15 15 chr2 106185531 106185868 -147070715 + MER1B DNA MER1_type 1 337 0 2025 217 74 39 chr2 106185868 106186250 -147070333 - L1MC4 LINE L1 -204 7838 7424 243 214 18 18 chr2 106187134 106187190 -147069393 + MER5B DNA MER1_type 7 62 -116 1943 129 24 3 chr2 106187193 106187526 -147069057 + L1PB4 LINE L1 5342 5681 -475 786 161 8 0 chr2 106187527 106187651 -147068932 + FLAM_C SINE Alu 2 126 -17 2671 131 25 51 chr2 106187655 106187755 -147068828 + L1PB4 LINE L1 5675 5776 -380 432 0 0 0 chr2 106187755 106187803 -147068780 + (TA)n Simple_repeat Simple_repeat 2 49 0 2671 131 25 51 chr2 106187803 106188190 -147068393 + L1PB4 LINE L1 5776 6149 -7 425 214 60 34 chr2 106188193 106188310 -147068273 - MER5B DNA MER1_type -58 120 1 344 248 105 106 chr2 106189839 106190059 -147066524 + MIR SINE MIR 1 218 -44 471 224 182 12 chr2 106190794 106190959 -147065624 - MIR SINE MIR -8 254 62 487 285 70 49 chr2 106191655 106191689 -147064894 + MIR SINE MIR 41 73 -189 1770 216 25 56 chr2 106191689 106192171 -147064412 - MLT1C LTR MaLR 0 467 1 487 285 70 49 chr2 106192171 106192342 -147064241 + MIR SINE MIR 73 253 -9 192 309 64 45 chr2 106192370 106192480 -147064103 - MIR SINE MIR -117 145 34 1538 176 24 54 chr2 106193325 106193695 -147062888 + MLT1A1 LTR MaLR 1 359 -6 184 315 0 19 chr2 106194293 106194347 -147062236 + L2 LINE L2 3245 3297 -16 225 65 0 0 chr2 106194352 106194383 -147062200 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 244 224 284 37 chr2 106194660 106194794 -147061789 - MER5B DNA MER1_type -8 170 4 407 277 36 0 chr2 106194801 106194913 -147061670 - MER5A DNA MER1_type -1 188 73 1377 227 178 11 chr2 106195647 106196114 -147060469 - MER74A LTR ERVL -13 545 1 1660 164 3 23 chr2 106196915 106197225 -147059358 + AluJo SINE Alu 2 305 -7 206 222 0 0 chr2 106197615 106197660 -147058923 + (CA)n Simple_repeat Simple_repeat 2 46 0 225 153 136 0 chr2 106198901 106198960 -147057623 + LTR2 LTR ERV1 14 80 -369 404 123 0 46 chr2 106199131 106199196 -147057387 + MLT1D LTR MaLR 29 90 -415 1421 143 38 34 chr2 106199253 106199519 -147057064 - AluJo SINE Alu -17 295 29 270 284 21 21 chr2 106200769 106200864 -147055719 + MIR3 SINE MIR 113 207 -1 785 171 6 0 chr2 106202082 106202257 -147054326 + GA-rich Low_complexity Low_complexity 1 176 0 678 174 0 0 chr2 106202294 106202567 -147054016 + GA-rich Low_complexity Low_complexity 1 273 0 259 203 72 19 chr2 106202572 106202779 -147053804 + Harlequin LTR ERV1 867 1084 -5812 342 228 20 40 chr2 106202932 106203033 -147053550 + MIR3 SINE MIR 82 180 -28 203 270 209 43 chr2 106203493 106203608 -147052975 - MIR3 SINE MIR -72 136 3 357 189 0 0 chr2 106203616 106203711 -147052872 + CT-rich Low_complexity Low_complexity 2 96 0 885 135 112 24 chr2 106204494 106204664 -147051919 - MER5A DNA MER1_type 0 189 5 241 164 0 0 chr2 106204824 106204873 -147051710 - MER5A DNA MER1_type -135 54 6 1828 190 95 109 chr2 106204998 106205661 -147050922 + MLT1E1 LTR MaLR 1 654 0 320 243 27 72 chr2 106205720 106205831 -147050752 - MLT1I LTR MaLR -51 358 253 180 0 0 0 chr2 106206521 106206541 -147050042 + (T)n Simple_repeat Simple_repeat 1 20 0 184 143 0 41 chr2 106206737 106206786 -147049797 + (TA)n Simple_repeat Simple_repeat 1 47 0 2274 215 31 39 chr2 106208482 106209081 -147047502 - MLT1H1 LTR MaLR -2 553 2 609 272 15 67 chr2 106209615 106209810 -147046773 - MIR3 SINE MIR -6 202 18 197 279 49 0 chr2 106210156 106210217 -147046366 + MIR SINE MIR 77 140 -122 362 314 114 14 chr2 106210222 106210442 -147046141 - MIR SINE MIR -1 261 20 229 299 175 34 chr2 106210467 106210735 -147045848 + L3 LINE CR1 1270 1575 -2 309 310 63 37 chr2 106210737 106210886 -147045697 + MIR SINE MIR 15 156 -52 247 225 84 0 chr2 106212239 106212310 -147044273 + L1MC4 LINE L1 7836 7912 -130 425 189 0 4 chr2 106212328 106212556 -147044027 + (TCTCTG)n Simple_repeat Simple_repeat 1 226 0 429 283 6 0 chr2 106212581 106212758 -147043825 + (TATATG)n Simple_repeat Simple_repeat 1 178 0 300 289 72 0 chr2 106212766 106212849 -147043734 - L1MC4 LINE L1 -1340 6702 6614 465 192 0 0 chr2 106212852 106213073 -147043510 + (TCTCTG)n Simple_repeat Simple_repeat 1 221 0 642 166 0 0 chr2 106213088 106213263 -147043320 + (TCTCTG)n Simple_repeat Simple_repeat 4 178 0 545 212 5 20 chr2 106213274 106213683 -147042900 + (TCTCTG)n Simple_repeat Simple_repeat 1 402 0 283 186 0 29 chr2 106213736 106213908 -147042675 + (TCTCTG)n Simple_repeat Simple_repeat 4 170 0 375 206 0 0 chr2 106213921 106214086 -147042497 + (TCTCTG)n Simple_repeat Simple_repeat 6 170 0 342 228 24 24 chr2 106214117 106214240 -147042343 + L1MC4 LINE L1 7919 8041 -1 1122 269 114 14 chr2 106215520 106215888 -147040695 - MLT1J LTR MaLR -106 405 1 403 303 112 21 chr2 106215903 106216091 -147040492 + MIR SINE MIR 20 224 -38 330 228 0 51 chr2 106217096 106217175 -147039408 + MLT1H LTR MaLR 459 533 -16 281 286 174 47 chr2 106217529 106217567 -147039016 - L2 LINE L2 -60 3253 3221 2902 84 23 46 chr2 106217567 106218043 -147038540 - MER4C LTR ERV1 0 465 1 281 286 174 47 chr2 106218043 106218217 -147038366 - L2 LINE L2 -92 3221 3014 1549 160 6 28 chr2 106218776 106219094 -147037489 + AluJo SINE Alu 1 311 -1 611 265 122 24 chr2 106219983 106220270 -147036313 + L2 LINE L2 2937 3251 -62 403 237 112 65 chr2 106220315 106220357 -147036226 - MIR3 SINE MIR -13 195 156 1975 77 0 11 chr2 106220357 106220630 -147035953 + AluY SINE Alu 31 300 -11 403 237 112 65 chr2 106220630 106220756 -147035827 - MIR3 SINE MIR -52 156 19 4504 163 48 37 chr2 106220778 106222064 -147034519 - L1MB3 LINE L1 -4 6179 4869 237 132 0 0 chr2 106222573 106222611 -147033972 + (TG)n Simple_repeat Simple_repeat 1 38 0 349 314 171 9 chr2 106222864 106223074 -147033509 + MIR SINE MIR 6 249 -13 207 239 60 30 chr2 106223264 106223331 -147033252 + L3 LINE CR1 1507 1575 -2 556 216 0 0 chr2 106223466 106223563 -147033020 + LTR39 LTR ERV1 624 720 -63 477 148 0 0 chr2 106223563 106223644 -147032939 + (A)n Simple_repeat Simple_repeat 1 81 0 850 266 149 40 chr2 106223657 106224007 -147032576 - MLT1I LTR MaLR -20 389 2 359 343 114 0 chr2 106224226 106224401 -147032182 + MIR SINE MIR 33 227 -35 22 0 0 0 chr2 106224819 106224841 -147031742 + AT_rich Low_complexity Low_complexity 1 22 0 314 23 23 0 chr2 106224983 106225026 -147031557 + (TAA)n Simple_repeat Simple_repeat 2 45 0 1691 157 114 15 chr2 106225455 106225787 -147030796 - MER47A DNA MER2_type -1 365 1 198 71 0 0 chr2 106226183 106226211 -147030372 + (CA)n Simple_repeat Simple_repeat 1 28 0 366 186 0 0 chr2 106226217 106226276 -147030307 - MER2 DNA MER2_type -6 339 281 201 153 17 51 chr2 106226276 106226335 -147030248 + (CAAA)n Simple_repeat Simple_repeat 2 58 0 1613 164 13 126 chr2 106226351 106226741 -147029842 + MER7A DNA MER2_type 3 346 0 1005 164 10 36 chr2 106226741 106226936 -147029647 - MER2 DNA MER2_type -155 190 1 2008 130 3 0 chr2 106227151 106227450 -147029133 + AluSx SINE Alu 1 300 -12 1024 256 85 13 chr2 106227594 106227910 -147028673 + MER58B DNA MER1_type 3 341 0 786 177 0 0 chr2 106228146 106228270 -147028313 - AluJb SINE Alu -187 125 2 696 330 36 0 chr2 106228340 106228564 -147028019 + MIR SINE MIR 20 251 -11 467 228 228 26 chr2 106228612 106228801 -147027782 - MIR SINE MIR -1 261 35 559 202 79 17 chr2 106230880 106231058 -147025525 + MER5A DNA MER1_type 1 189 0 2325 83 0 6 chr2 106231337 106231649 -147024934 - AluSg SINE Alu 0 310 1 2064 67 3 11 chr2 106233801 106234115 -147022468 + AluY SINE Alu 1 312 0 318 303 105 12 chr2 106237096 106237258 -147019325 + MER5A DNA MER1_type 7 183 -6 257 327 67 10 chr2 106238731 106238835 -147017748 - L2 LINE L2 -3 3269 3160 669 264 181 28 chr2 106239149 106239437 -147017146 + L2 LINE L2 2981 3312 -1 1198 118 3 17 chr2 106239625 106239900 -147016683 - MLT1A1 LTR MaLR 0 365 1 696 220 54 18 chr2 106240139 106240307 -147016276 - MER63A DNA MER1_type 0 210 37 30 59 0 0 chr2 106240367 106240418 -147016165 + AT_rich Low_complexity Low_complexity 1 51 0 577 278 0 0 chr2 106240604 106240737 -147015846 + MIR SINE MIR 18 150 -112 858 246 79 0 chr2 106240882 106241085 -147015498 + MER58A DNA MER1_type 6 224 0 403 236 142 62 chr2 106241570 106241676 -147014907 + L1MC5 LINE L1 7603 7699 -262 2079 48 44 7 chr2 106241676 106241980 -147014603 - AluY SINE Alu 0 314 1 403 236 142 62 chr2 106241980 106242181 -147014402 + L1MC5 LINE L1 7699 7936 -25 306 220 149 71 chr2 106242230 106242371 -147014212 + L1ME3A LINE L1 5808 5959 -211 192 40 0 0 chr2 106242460 106242485 -147014098 + (TG)n Simple_repeat Simple_repeat 2 26 0 253 321 75 9 chr2 106243075 106243181 -147013402 + L2 LINE L2 3156 3268 -4 207 224 157 90 chr2 106243890 106244024 -147012559 - MIR SINE MIR -6 256 114 2084 179 116 39 chr2 106244635 106245153 -147011430 - MER74A LTR ERVL 0 558 1 1772 165 61 15 chr2 106245155 106245483 -147011100 + MER61A LTR ERV1 1 343 0 4837 98 6 1 chr2 106248402 106249085 -147007498 - L1PA13 LINE L1 -2 6161 5476 987 67 0 98 chr2 106249085 106249249 -147007334 - AluY SINE Alu -29 282 135 9265 137 15 39 chr2 106249249 106250303 -147006280 - L1PA13 LINE L1 -684 5479 4499 1762 183 0 0 chr2 106250303 106250614 -147005969 - AluSx SINE Alu 0 312 2 9265 137 15 39 chr2 106250614 106251421 -147005162 - L1PA13 LINE L1 -1664 4499 3674 225 226 60 71 chr2 106251431 106251515 -147005068 - L2 LINE L2 -5 3308 3226 256 328 50 40 chr2 106251614 106251812 -147004771 - MLT1J LTR MaLR -193 318 119 520 225 18 13 chr2 106252254 106252481 -147004102 + GA-rich Low_complexity Low_complexity 1 228 0 216 0 0 0 chr2 106252656 106252680 -147003903 + (TTCA)n Simple_repeat Simple_repeat 2 25 0 200 286 91 26 chr2 106252713 106252790 -147003793 - L2 LINE L2 -81 3191 3110 271 319 78 26 chr2 106253459 106253575 -147003008 - MIR SINE MIR -64 144 23 2141 255 55 8 chr2 106253850 106254380 -147002203 + MLT1H1 LTR MaLR 1 555 0 1340 111 10 0 chr2 106254840 106255039 -147001544 + L1PB2 LINE L1 5951 6151 0 1617 61 14 5 chr2 106255487 106255699 -147000884 - L1PA8 LINE L1 -18 6154 5941 3270 146 13 9 chr2 106257357 106257885 -146998698 + L1MA8 LINE L1 5593 6122 -169 4749 68 3 7 chr2 106257885 106258490 -146998093 + L1PA8 LINE L1 5501 6103 -69 289 380 44 15 chr2 106260662 106260799 -146995784 + MIR3 SINE MIR 45 185 -23 2063 127 0 0 chr2 106261420 106261720 -146994863 + AluSq SINE Alu 1 300 -13 675 266 55 38 chr2 106262231 106262468 -146994115 + MIR SINE MIR 1 241 -21 1036 224 9 9 chr2 106262511 106262734 -146993849 - MER58A DNA MER1_type 0 224 2 224 302 0 0 chr2 106264131 106264184 -146992399 + (TATG)n Simple_repeat Simple_repeat 4 56 0 257 252 93 93 chr2 106264355 106264506 -146992077 - MIR SINE MIR -65 197 47 1884 214 24 30 chr2 106264739 106265165 -146991418 - MLT1F LTR MaLR -4 538 116 219 298 43 11 chr2 106265195 106265289 -146991294 + MIR3 SINE MIR 110 206 -2 254 263 50 38 chr2 106265415 106265495 -146991088 + MIR SINE MIR 18 98 -110 262 242 19 161 chr2 106266154 106266315 -146990268 - MLT1K LTR MaLR 0 588 451 369 326 23 23 chr2 106266349 106266521 -146990062 - MLT1K LTR MaLR -233 355 184 1416 119 0 0 chr2 106266537 106266775 -146989808 + AluSg/x SINE Alu 81 318 0 283 56 0 0 chr2 106266739 106266807 -146989776 + (TAAAA)n Simple_repeat Simple_repeat 3 70 0 186 283 130 0 chr2 106268594 106268686 -146987897 + MIR SINE MIR 100 203 -59 231 306 41 10 chr2 106268823 106268921 -146987662 - MIR SINE MIR -65 197 97 432 333 50 5 chr2 106269402 106269600 -146986983 + MIR SINE MIR 13 219 -43 212 224 20 0 chr2 106269716 106269765 -146986818 + MIR SINE MIR 89 138 -124 274 243 14 0 chr2 106270090 106270163 -146986420 - MIR SINE MIR -76 132 58 233 266 16 0 chr2 106270597 106270661 -146985922 - MER119 DNA MER1_type -514 69 5 219 188 43 14 chr2 106271789 106271858 -146984725 + (TA)n Simple_repeat Simple_repeat 2 72 0 448 184 169 44 chr2 106271942 106272078 -146984505 - MIR SINE MIR -52 210 58 427 318 14 0 chr2 106272836 106272984 -146983599 + MIR SINE MIR 85 234 -28 216 259 37 49 chr2 106272988 106273069 -146983514 + MER5B DNA MER1_type 28 107 -71 276 174 267 0 chr2 106273380 106273466 -146983117 - MER96 DNA MER1_type? -64 111 3 238 224 69 0 chr2 106273528 106273586 -146982997 + L2 LINE L2 3227 3288 -25 439 184 53 61 chr2 106273610 106273724 -146982859 - MIR SINE MIR -80 182 70 244 337 68 11 chr2 106275511 106275701 -146980882 + L2 LINE L2 2513 2713 -601 364 288 6 19 chr2 106276331 106276357 -146980226 - L1MA10 LINE L1 -2 6332 6307 2534 249 66 16 chr2 106276357 106277056 -146979527 - L1ME2 LINE L1 -18 6146 5413 2019 122 3 3 chr2 106277207 106277511 -146979072 + AluSx SINE Alu 1 304 -8 510 270 9 0 chr2 106277556 106277667 -146978916 + MER81 DNA DNA 1 112 -2 2210 108 18 78 chr2 106277816 106277892 -146978691 + THE1B LTR MaLR 1 80 -284 2435 54 3 0 chr2 106277892 106278189 -146978394 + AluY SINE Alu 1 298 -13 2210 108 18 78 chr2 106278189 106278499 -146978084 + THE1B LTR MaLR 80 364 0 186 306 0 0 chr2 106279802 106279851 -146976732 - L2 LINE L2 0 3313 3265 420 97 0 0 chr2 106280159 106280221 -146976362 + (TG)n Simple_repeat Simple_repeat 2 63 0 325 287 157 43 chr2 106281557 106281787 -146974796 - MLT1L LTR MaLR -15 600 345 2073 119 0 10 chr2 106282008 106282319 -146974264 + AluSx SINE Alu 1 308 -4 413 291 72 84 chr2 106282357 106282904 -146973679 - L1MC/D LINE L1 -580 5662 5091 509 238 69 100 chr2 106283216 106283447 -146973136 - L2 LINE L2 0 3313 3090 745 205 153 90 chr2 106284189 106284711 -146971872 - MLT1H1 LTR MaLR 0 555 1 244 232 107 9 chr2 106284833 106284945 -146971638 + L1ME4a LINE L1 5999 6121 0 26 0 0 0 chr2 106284949 106284975 -146971608 + AT_rich Low_complexity Low_complexity 1 26 0 196 192 19 58 chr2 106285189 106285241 -146971342 + L3 LINE CR1 1510 1559 -18 2533 261 70 36 chr2 106285953 106286211 -146970372 - L1MEc LINE L1 -4343 2053 1805 2005 76 0 0 chr2 106286211 106286462 -146970121 - AluY SINE Alu -12 299 49 2533 261 70 36 chr2 106286462 106287092 -146969491 - L1MEc LINE L1 -4591 1805 1110 2079 144 3 3 chr2 106287092 106287404 -146969179 - AluSx SINE Alu 0 312 1 2533 261 70 36 chr2 106287404 106287749 -146968834 - L1MEc LINE L1 -5286 1110 778 9780 218 37 12 chr2 106287754 106288596 -146967987 + L1MB7 LINE L1 2633 3453 -2731 342 0 0 0 chr2 106288596 106288634 -146967949 + (CA)n Simple_repeat Simple_repeat 1 38 0 9780 218 37 12 chr2 106288634 106289087 -146967496 + L1MB7 LINE L1 3453 3893 -2291 207 0 0 0 chr2 106289087 106289110 -146967473 + (CAA)n Simple_repeat Simple_repeat 2 24 0 9780 218 37 12 chr2 106289110 106291278 -146965305 + L1MB7 LINE L1 3893 6183 -1 359 222 122 0 chr2 106292003 106292093 -146964490 - MER5A DNA MER1_type -3 186 86 2330 96 0 0 chr2 106293697 106293989 -146962594 + AluSg SINE Alu 1 292 -18 235 256 33 22 chr2 106294470 106294560 -146962023 + LTR37B LTR ERV1 209 299 -169 235 238 63 0 chr2 106294564 106294627 -146961956 - L1ME3A LINE L1 -15 6391 6325 2133 285 50 41 chr2 106294632 106295970 -146960613 - L1ME3A LINE L1 -367 6031 4638 235 162 0 0 chr2 106295970 106296007 -146960576 - Tigger1 DNA MER2_type -903 1515 1479 2133 285 50 41 chr2 106296007 106296225 -146960358 - L1ME3A LINE L1 -1760 4638 4423 1098 277 111 30 chr2 106296219 106296877 -146959706 - L1ME3A LINE L1 -4736 1648 938 * 15102 123 39 15 chr2 106296991 106297522 -146959061 - Tigger1 DNA MER2_type -1 2417 1900 1652 151 108 43 chr2 106297522 106297874 -146958709 + THE1C LTR MaLR 1 375 0 15102 123 39 15 chr2 106297874 106299703 -146956880 - Tigger1 DNA MER2_type -518 1900 1 257 258 76 8 chr2 106299704 106299862 -146956721 - L1MCc LINE L1 -4787 2154 2059 2524 72 0 3 chr2 106299862 106300167 -146956416 - AluY SINE Alu -7 304 1 592 313 94 13 chr2 106300353 106300956 -146955627 - L1MCc LINE L1 -4884 1955 1260 3048 147 10 4 chr2 106301532 106302016 -146954567 - L1MA4A LINE L1 -15 6288 5802 310 220 17 85 chr2 106302515 106302633 -146953950 + LTR37B LTR ERV1 285 394 -74 1837 221 17 10 chr2 106303369 106303776 -146952807 - L1ME LINE L1 -503 5663 5254 189 0 0 0 chr2 106304055 106304076 -146952507 + (CCAA)n Simple_repeat Simple_repeat 2 22 0 180 219 0 0 chr2 106304850 106304891 -146951692 + (TA)n Simple_repeat Simple_repeat 2 42 0 665 223 46 35 chr2 106304891 106305088 -146951495 + L1ME1 LINE L1 5905 6103 -63 2391 78 0 0 chr2 106305756 106306051 -146950532 + AluSc SINE Alu 1 295 -14 541 289 104 22 chr2 106306078 106306769 -146949814 - L1ME3 LINE L1 -277 5885 5127 226 289 0 12 chr2 106306920 106307003 -146949580 - L1ME3 LINE L1 -1162 4984 4903 303 281 25 16 chr2 106307045 106307220 -146949363 - MLT1J2 LTR MaLR -1 408 279 424 235 76 0 chr2 106307408 106307540 -146949043 - L1ME3 LINE L1 -1298 4848 4707 * 659 287 80 67 chr2 106307537 106308510 -146948073 + L1M4 LINE L1 3237 4222 -1924 322 405 10 5 chr2 106309833 106310038 -146946545 - L3 LINE CR1 -705 872 667 433 307 145 56 chr2 106310397 106310755 -146945828 - L3 LINE CR1 -939 638 249 293 269 65 0 chr2 106311160 106311253 -146945330 - MER5A DNA MER1_type -80 109 11 422 235 49 26 chr2 106311273 106311414 -146945169 - MIR SINE MIR -67 141 15 219 218 0 0 chr2 106311518 106311573 -146945010 + (CA)n Simple_repeat Simple_repeat 1 55 0 197 139 23 0 chr2 106311998 106312041 -146944542 + (TG)n Simple_repeat Simple_repeat 2 45 0 367 270 135 22 chr2 106312352 106312468 -146944115 + MIR SINE MIR 46 190 -72 5034 126 21 0 chr2 106312468 106313196 -146943387 + L1PA15 LINE L1 5419 6161 -4 367 270 135 22 chr2 106313196 106313257 -146943326 + MIR SINE MIR 190 243 -19 2140 113 20 0 chr2 106313746 106314046 -146942537 + AluSx SINE Alu 1 306 -6 2302 106 0 6 chr2 106315385 106315697 -146940886 - AluY SINE Alu -1 310 1 234 81 0 0 chr2 106316261 106316298 -146940285 + (TG)n Simple_repeat Simple_repeat 1 37 0 237 185 92 108 chr2 106316595 106316725 -146939858 - L1ME4a LINE L1 -12 6109 5982 582 291 20 88 chr2 106316940 106317217 -146939366 - L1ME4a LINE L1 -448 5722 5470 4097 48 0 6 chr2 106317217 106317691 -146938892 + L1PA5 LINE L1 5684 6154 0 582 291 20 88 chr2 106317691 106317744 -146938839 - L1ME4a LINE L1 -700 5470 5415 273 57 0 0 chr2 106318241 106318276 -146938307 + (TG)n Simple_repeat Simple_repeat 1 35 0 279 331 52 35 chr2 106318427 106318599 -146937984 + L2 LINE L2 3098 3272 0 396 0 0 0 chr2 106318979 106319023 -146937560 + (TAA)n Simple_repeat Simple_repeat 2 45 0 425 267 89 22 chr2 106319081 106319216 -146937367 - MIR SINE MIR -94 168 25 403 286 96 32 chr2 106319305 106319525 -146937058 - MIR SINE MIR -4 258 25 779 260 38 73 chr2 106320276 106320645 -146935938 - L1MC/D LINE L1 -2051 5757 5402 242 300 0 0 chr2 106321544 106321604 -146934979 - L2 LINE L2 -9 3304 3245 330 45 0 0 chr2 106322345 106322389 -146934194 + (TG)n Simple_repeat Simple_repeat 2 45 0 1890 161 33 46 chr2 106322805 106323171 -146933412 + MLT1A1 LTR MaLR 5 365 0 242 350 57 41 chr2 106323891 106324014 -146932569 - MIR SINE MIR -76 132 7 733 184 75 52 chr2 106325072 106325246 -146931337 - MER5B DNA MER1_type 0 178 1 223 102 20 20 chr2 106327977 106328026 -146928557 + (TA)n Simple_repeat Simple_repeat 2 50 0 2664 208 138 9 chr2 106328036 106328680 -146927903 + MER21B LTR ERV1 13 739 -124 2374 92 0 3 chr2 106328769 106329074 -146927509 + AluY SINE Alu 1 304 -7 1797 172 56 9 chr2 106329681 106330018 -146926565 - L1MA9 LINE L1 -2 6310 5958 425 251 41 6 chr2 106330216 106330387 -146926196 + (TG)n Simple_repeat Simple_repeat 2 178 0 264 297 0 69 chr2 106330439 106330540 -146926043 - L2 LINE L2 -25 3247 3154 391 229 106 64 chr2 106330726 106330914 -146925669 + L2 LINE L2 3118 3313 0 546 104 38 47 chr2 106331745 106331851 -146924732 + MER104 DNA Tc2 24 128 -52 2028 124 0 7 chr2 106333527 106333851 -146922732 + AluSx SINE Alu 1 322 0 180 171 14 29 chr2 106333949 106334019 -146922564 + GA-rich Low_complexity Low_complexity 4 72 0 273 171 0 0 chr2 106334132 106334173 -146922410 - THE1C LTR MaLR 0 428 388 2078 121 7 0 chr2 106334173 106334453 -146922130 + AluSx SINE Alu 1 282 -30 1831 146 46 43 chr2 106334471 106334669 -146921914 - THE1C LTR MaLR -23 352 151 2247 118 7 0 chr2 106334669 106334965 -146921618 + AluSx SINE Alu 1 298 -14 1831 146 46 43 chr2 106334965 106335116 -146921467 - THE1C LTR MaLR -224 151 2 1974 269 73 29 chr2 106336067 106336722 -146919861 - MER20B DNA MER1_type 0 783 100 670 240 10 36 chr2 106337450 106337646 -146918937 - L2 LINE L2 0 3313 3123 411 38 0 0 chr2 106337677 106337730 -146918853 + (TG)n Simple_repeat Simple_repeat 2 54 0 753 285 28 9 chr2 106338501 106338715 -146917868 - MIR SINE MIR -42 220 3 303 286 41 41 chr2 106338857 106338955 -146917628 + MIR SINE MIR 54 151 -111 1610 179 0 29 chr2 106338959 106339266 -146917317 + AluJo SINE Alu 7 304 -8 360 0 0 0 chr2 106339290 106339330 -146917253 + (CAA)n Simple_repeat Simple_repeat 3 42 0 1564 218 64 34 chr2 106339824 106340292 -146916291 - Charlie1b DNA MER1_type -5 518 37 926 233 52 9 chr2 106340819 106341051 -146915532 + L1MEc LINE L1 35 276 -6120 4170 247 115 13 chr2 106341052 106342483 -146914100 + L1MEc LINE L1 447 2022 -4374 * 4828 228 46 42 chr2 106342465 106343001 -146913582 + L1MEc LINE L1 3051 3583 -2632 2395 81 0 0 chr2 106343001 106343296 -146913287 + AluY SINE Alu 6 300 -11 4828 228 46 42 chr2 106343296 106344230 -146912353 + L1MEc LINE L1 3583 4527 -1688 2395 93 3 3 chr2 106344399 106344711 -146911872 - AluSp SINE Alu -1 312 1 973 175 50 5 chr2 106345775 106345975 -146910608 + MER3 DNA MER1_type 1 209 0 2380 86 0 3 chr2 106346408 106346709 -146909874 - AluSg SINE Alu -10 300 1 1581 231 89 80 chr2 106347288 106347838 -146908745 - MLT1H1 LTR MaLR 0 555 1 2871 143 9 12 chr2 106349530 106349957 -146906626 + MSTB LTR MaLR 1 426 0 430 236 146 7 chr2 106351268 106351412 -146905171 - MER5B DNA MER1_type -10 168 5 214 341 45 0 chr2 106351975 106352063 -146904520 + MIR3 SINE MIR 79 170 -38 435 233 180 53 chr2 106352197 106352386 -146904197 - MIR SINE MIR -29 233 21 35 78 0 0 chr2 106352836 106352913 -146903670 + GC_rich Low_complexity Low_complexity 1 77 0 235 270 35 70 chr2 106353548 106353663 -146902920 - MIR SINE MIR -34 228 118 488 248 0 26 chr2 106354576 106354689 -146901894 - L2 LINE L2 0 3313 3204 305 299 157 0 chr2 106355768 106355915 -146900668 + MER5B DNA MER1_type 4 173 -5 1359 262 163 22 chr2 106356293 106356979 -146899604 - MER20B DNA MER1_type 0 783 1 406 255 116 26 chr2 106357119 106357314 -146899269 + L1ME1 LINE L1 5962 6165 -1 573 156 0 0 chr2 106358902 106359015 -146897568 + AluJb SINE Alu 207 319 0 470 280 14 72 chr2 106359486 106359693 -146896890 + MER115 DNA AcHobo 43 237 -456 231 299 15 15 chr2 106360074 106360141 -146896442 - LTR67 LTR ERVL -452 105 39 225 154 0 0 chr2 106361468 106361507 -146895076 + CT-rich Low_complexity Low_complexity 2 40 0 2627 61 0 0 chr2 106362257 106362568 -146894015 + AluY SINE Alu 1 311 0 184 257 86 43 chr2 106363320 106363390 -146893193 + L2 LINE L2 3228 3300 -13 2285 112 70 20 chr2 106363537 106363894 -146892689 + THE1C LTR MaLR 1 375 0 229 264 138 50 chr2 106364637 106364796 -146891787 + L2 LINE L2 2569 2741 -573 375 269 78 21 chr2 106365231 106365372 -146891211 - MIR SINE MIR -3 259 111 2093 136 0 3 chr2 106366551 106366846 -146889737 - AluSx SINE Alu -18 294 1 365 284 105 25 chr2 106367965 106368127 -146888456 - MIR3 SINE MIR -26 182 8 1787 272 109 35 chr2 106368275 106369319 -146887264 - L2 LINE L2 -40 3273 2150 1711 266 126 25 chr2 106369323 106370091 -146886492 - L1M4 LINE L1 -5683 859 14 768 253 163 6 chr2 106370132 106370452 -146886131 - L1MEc LINE L1 -2670 3545 3176 1479 269 35 20 chr2 106370455 106370965 -146885618 + MER74B LTR ERVL 55 572 -50 5692 236 60 44 chr2 106371018 106371703 -146884880 - L1MEc LINE L1 -3034 3181 2508 1963 128 3 26 chr2 106371703 106372035 -146884548 - AluSx SINE Alu 0 312 1 5692 236 60 44 chr2 106372035 106372135 -146884448 - L1MEc LINE L1 -3707 2508 2411 567 109 99 10 chr2 106372135 106372236 -146884347 - L1MA9 LINE L1 -10 6302 6193 5692 236 60 44 chr2 106372236 106374353 -146882230 - L1MEc LINE L1 -3804 2411 238 713 201 7 7 chr2 106374366 106374520 -146882063 - L1MEc LINE L1 -6199 197 44 335 265 41 48 chr2 106374538 106374685 -146881898 - MIR SINE MIR -112 150 5 221 284 193 0 chr2 106376733 106376842 -146879741 + MIR SINE MIR 59 188 -74 499 274 9 0 chr2 106377098 106377211 -146879372 + MER94 DNA DNA 21 134 0 24 0 0 0 chr2 106377253 106377277 -146879306 + AT_rich Low_complexity Low_complexity 1 24 0 2601 46 0 3 chr2 106377476 106377781 -146878802 - AluY SINE Alu -7 304 1 395 209 78 35 chr2 106377914 106378029 -146878554 - L2 LINE L2 -1 3312 3193 325 303 26 114 chr2 106379286 106379343 -146877240 + HAL1b LINE L1 324 384 -964 972 186 9 63 chr2 106379343 106379564 -146877019 - MER3 DNA MER1_type 0 209 1 325 303 26 114 chr2 106379564 106379777 -146876806 + HAL1b LINE L1 384 570 -778 788 204 46 62 chr2 106379822 106380062 -146876521 - MER106A DNA MER1_type 0 236 1 353 326 82 41 chr2 106380198 106380732 -146875851 + L1ME4a LINE L1 3888 4443 -1703 1961 141 0 3 chr2 106380812 106381096 -146875487 + AluSx SINE Alu 1 283 -29 379 298 179 24 chr2 106381133 106381546 -146875037 + L1ME4a LINE L1 5342 5818 -1990 384 244 75 25 chr2 106381637 106381797 -146874786 + L1ME4a LINE L1 5952 6119 -2 225 0 0 0 chr2 106382065 106382090 -146874493 + (T)n Simple_repeat Simple_repeat 1 25 0 272 370 33 70 chr2 106382936 106383266 -146873317 + L2 LINE L2 2935 3252 -20 1089 239 41 78 chr2 106383473 106383937 -146872646 + L1ME LINE L1 4326 4772 -1374 683 232 0 21 chr2 106386078 106386220 -146870363 + FRAM SINE Alu 8 146 -30 21 0 0 0 chr2 106386220 106386241 -146870342 + AT_rich Low_complexity Low_complexity 1 21 0 2117 111 3 0 chr2 106387017 106387305 -146869278 + AluSx SINE Alu 1 289 -23 318 266 142 55 chr2 106390431 106390660 -146865923 + MIR SINE MIR 8 256 -6 277 235 122 9 chr2 106393046 106393161 -146863422 - L1ME4a LINE L1 -3 6118 5991 347 326 111 4 chr2 106393177 106393438 -146863145 - L1ME4a LINE L1 -191 5930 5642 916 92 0 129 chr2 106393623 106393786 -146862797 + AluSx SINE Alu 49 190 -122 469 267 199 39 chr2 106393839 106394176 -146862407 + L2 LINE L2 2921 3311 -2 318 296 120 25 chr2 106395055 106395330 -146861253 + L1ME LINE L1 5458 5769 -395 2238 203 40 8 chr2 106395915 106396388 -146860195 + Charlie1b DNA MER1_type 2 489 -34 2533 49 0 13 chr2 106398336 106398642 -146857941 + AluY SINE Alu 1 302 -9 1735 116 23 104 chr2 106399639 106399985 -146856598 - AluYb8 SINE Alu 0 318 1 306 236 363 6 chr2 106400144 106400363 -146856220 - MER102b DNA MER1_type -48 293 4 400 239 97 9 chr2 106400365 106400478 -146856105 + MIR SINE MIR 70 192 -70 1755 205 56 132 chr2 106401004 106401822 -146854761 - L1MC4 LINE L1 0 8042 7287 421 310 82 37 chr2 106402823 106403079 -146853504 - L1M4 LINE L1 -2613 3533 3255 240 111 0 0 chr2 106403079 106403115 -146853468 + (CA)n Simple_repeat Simple_repeat 2 37 0 421 310 82 37 chr2 106403115 106403213 -146853370 - L1M4 LINE L1 -2891 3255 3163 277 281 50 72 chr2 106403213 106403434 -146853149 - L1ME LINE L1 -374 5747 5532 186 43 0 0 chr2 106403434 106403457 -146853126 + (TTTTA)n Simple_repeat Simple_repeat 5 27 0 627 110 24 0 chr2 106403457 106403539 -146853044 - AluJo SINE Alu -32 280 197 805 175 7 7 chr2 106403542 106403685 -146852898 - AluJo SINE Alu -169 143 1 356 247 77 16 chr2 106403691 106403950 -146852633 - L1ME LINE L1 -655 5529 5265 1919 265 98 25 chr2 106403994 106404745 -146851838 - L1ME3A LINE L1 -7 6163 5358 808 182 0 8 chr2 106404791 106404923 -146851660 - FRAM SINE Alu -22 154 24 1012 252 10 0 chr2 106404947 106405153 -146851430 - MER58A DNA MER1_type -15 209 2 459 285 109 8 chr2 106405153 106405420 -146851163 - L1ME3A LINE L1 -842 5304 5011 1854 154 3 3 chr2 106405581 106406047 -146850536 - AluSx SINE Alu 0 466 1 264 382 18 18 chr2 106406190 106406355 -146850228 + MER5B DNA MER1_type 11 175 -3 277 156 0 0 chr2 106406459 106406504 -146850079 + MIR3 SINE MIR 110 154 -54 391 340 72 19 chr2 106406564 106406826 -146849757 - L2 LINE L2 -98 3174 2899 194 386 38 8 chr2 106406923 106407055 -146849528 - L2 LINE L2 -582 2732 2597 264 313 130 30 chr2 106407199 106407538 -146849045 - L2 LINE L2 -2086 1228 856 201 283 19 66 chr2 106408110 106408216 -146848367 + MIR SINE MIR 162 262 0 1174 193 9 0 chr2 106409910 106410122 -146846461 + AluJb SINE Alu 1 214 -98 198 0 0 0 chr2 106410151 106410173 -146846410 + (A)n Simple_repeat Simple_repeat 1 22 0 310 318 124 0 chr2 106410519 106410648 -146845935 + L2 LINE L2 3128 3272 0 227 217 17 0 chr2 106411342 106411402 -146845181 + (CATATA)n Simple_repeat Simple_repeat 2 62 0 262 147 29 0 chr2 106411425 106411493 -146845090 + (TCTA)n Simple_repeat Simple_repeat 2 71 0 22 0 0 0 chr2 106412320 106412342 -146844241 + AT_rich Low_complexity Low_complexity 1 22 0 279 73 0 0 chr2 106412342 106412383 -146844200 - L1MA3 LINE L1 0 6305 6265 223 175 88 18 chr2 106412383 106412497 -146844086 + (TA)n Simple_repeat Simple_repeat 2 123 0 20867 158 37 21 chr2 106412497 106418351 -146838232 - L1 LINE L1 -1616 5949 13 236 344 32 0 chr2 106418368 106418461 -146838122 - MIR SINE MIR -83 125 30 308 302 38 9 chr2 106418953 106419059 -146837524 + L2 LINE L2 3203 3311 -2 369 328 42 88 chr2 106419176 106419651 -146836932 - L2 LINE L2 -1 3271 2819 1225 334 89 34 chr2 106419894 106421008 -146835575 - L2 LINE L2 -3 3310 2135 387 255 0 51 chr2 106421506 106421663 -146834920 - L1MC5 LINE L1 -83 7878 7730 * 424 204 41 0 chr2 106421616 106421714 -146834869 + L1MD1 LINE L1 5882 5983 -259 2303 58 11 4 chr2 106422720 106423032 -146833551 + AluY SINE Alu 1 314 0 337 278 80 80 chr2 106423336 106423431 -146833152 + L1M4 LINE L1 2759 2853 -3293 827 109 8 0 chr2 106423431 106423559 -146833024 + L1MA7 LINE L1 6162 6290 -1 337 278 80 80 chr2 106423559 106423863 -146832720 + L1M4 LINE L1 2852 3158 -2988 535 322 48 46 chr2 106424204 106424788 -146831795 + L1M4 LINE L1 4124 4708 -1438 2025 283 45 34 chr2 106424840 106425490 -146831093 + L1 LINE L1 9 665 -6124 2995 211 23 37 chr2 106425607 106426304 -146830279 + L1 LINE L1 1251 1937 -4852 1896 211 47 55 chr2 106426320 106427312 -146829271 - L1 LINE L1 -3738 3827 2835 4762 150 4 28 chr2 106427313 106428114 -146828469 + L1 LINE L1 5153 5933 -855 185 0 40 0 chr2 106428114 106428139 -146828444 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 4762 150 4 28 chr2 106428139 106428182 -146828401 + L1 LINE L1 5933 5976 -812 370 330 67 21 chr2 106428478 106428685 -146827898 + MIR3 SINE MIR 10 218 -44 231 36 0 0 chr2 106430708 106430736 -146825847 + (TG)n Simple_repeat Simple_repeat 2 29 0 259 314 33 39 chr2 106431491 106431644 -146824939 + L2 LINE L2 2371 2522 -792 407 314 52 26 chr2 106431701 106431854 -146824729 + MIR SINE MIR 30 186 -76 619 292 75 81 chr2 106431978 106432516 -146824067 - L1ME3A LINE L1 -81 6081 5549 254 290 14 0 chr2 106433017 106433086 -146823497 + MER117 DNA MER1_type 64 133 -64 5003 126 1 8 chr2 106434166 106434907 -146821676 + L1MA4 LINE L1 5558 6293 -7 32 0 0 0 chr2 106435885 106435917 -146820666 + AT_rich Low_complexity Low_complexity 1 32 0 322 213 21 0 chr2 106436659 106436753 -146819830 + GA-rich Low_complexity Low_complexity 2 97 0 274 202 12 12 chr2 106436771 106436855 -146819728 + GA-rich Low_complexity Low_complexity 2 85 0 240 35 0 0 chr2 106437112 106437141 -146819442 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 366 259 71 9 chr2 106439271 106439383 -146817200 - MLT1G1 LTR MaLR -476 119 1 333 316 59 15 chr2 106439467 106439603 -146816980 + MIR SINE MIR 47 188 -74 200 349 48 40 chr2 106440574 106440700 -146815883 - L2 LINE L2 -1 3312 3186 319 314 0 0 chr2 106440718 106440804 -146815779 + (TG)n Simple_repeat Simple_repeat 2 87 0 1416 112 24 0 chr2 106441325 106441570 -146815013 + AluSq SINE Alu 72 321 0 1063 183 66 52 chr2 106442057 106442147 -146814436 - AluJo SINE Alu -13 299 212 2206 94 3 3 chr2 106442147 106442445 -146814138 - AluSq SINE Alu -15 298 1 1063 183 66 52 chr2 106442445 106442643 -146813940 - AluJo SINE Alu -100 212 7 388 319 34 12 chr2 106443633 106443818 -146812765 + MIR SINE MIR 53 243 -19 447 297 34 0 chr2 106443927 106444045 -146812538 - L2 LINE L2 0 3313 3192 1904 140 25 0 chr2 106444545 106444831 -146811752 + AluSx SINE Alu 1 293 -19 900 161 81 0 chr2 106446602 106446776 -146809807 - L1MB3 LINE L1 -3 6180 5993 332 94 0 0 chr2 106450402 106450455 -146806128 - AluSp SINE Alu 0 303 251 300 155 35 35 chr2 106450445 106450503 -146806080 - AluSp SINE Alu -126 177 120 * 305 267 33 87 chr2 106451359 106451509 -146805074 + MIR SINE MIR 10 151 -111 368 253 133 40 chr2 106451654 106451804 -146804779 - MIR SINE MIR -20 242 79 732 206 18 41 chr2 106451831 106452049 -146804534 + L1MC5 LINE L1 7620 7832 -129 1750 223 76 22 chr2 106452359 106452848 -146803735 - MLT2B2 LTR ERVL 0 515 1 259 227 43 78 chr2 106452893 106453034 -146803549 - L1ME LINE L1 -450 5671 5536 2114 112 0 3 chr2 106453829 106454125 -146802458 - AluSx SINE Alu -17 295 1 188 268 42 70 chr2 106455112 106455183 -146801400 - L2 LINE L2 -66 3206 3138 404 295 122 31 chr2 106457502 106457790 -146798793 + L1MC2 LINE L1 5272 5585 -2223 307 274 115 18 chr2 106457803 106458110 -146798473 + L1MC2 LINE L1 5633 5910 -469 215 236 319 0 chr2 106458856 106458928 -146797655 - MIR SINE MIR -14 248 154 466 236 77 104 chr2 106459367 106459626 -146796957 + MLT1K LTR MaLR 337 588 0 4298 132 50 9 chr2 106461947 106462704 -146793879 - L1PB4 LINE L1 0 6156 5369 182 237 0 0 chr2 106464386 106464424 -146792159 - L2 LINE L2 -208 3064 3027 1232 323 141 42 chr2 106464910 106465762 -146790821 - L1 LINE L1 -1536 4610 3591 1736 126 0 94 chr2 106465762 106466104 -146790479 + AluY SINE Alu 2 311 0 1232 323 141 42 chr2 106466104 106466514 -146790069 - L1 LINE L1 -2555 3591 3223 556 296 69 58 chr2 106466575 106466936 -146789647 - L1 LINE L1 -3005 3141 2777 465 187 28 28 chr2 106468220 106468327 -146788256 + MER20 DNA MER1_type 113 219 0 260 308 0 0 chr2 106469696 106469774 -146786809 + MIR3 SINE MIR 83 160 -48 301 239 0 15 chr2 106469775 106469842 -146786741 - MER5B DNA MER1_type -1 177 112 571 151 0 17 chr2 106470043 106470307 -146786276 + AluJo SINE Alu 1 312 0 637 234 117 0 chr2 106470343 106470582 -146786001 + L1ME4a LINE L1 5617 5883 -238 24 0 0 0 chr2 106470587 106470611 -146785972 + AT_rich Low_complexity Low_complexity 1 24 0 2147 115 0 7 chr2 106470613 106470918 -146785665 + AluSq SINE Alu 1 303 -10 286 252 42 25 chr2 106470918 106471037 -146785546 + L1ME4a LINE L1 5947 6067 -54 541 247 5 121 chr2 106471587 106471777 -146784806 - MER91A DNA MER1_type -11 185 18 293 344 50 50 chr2 106471824 106472126 -146784457 - L2 LINE L2 -526 2788 2487 363 273 174 83 chr2 106472128 106472806 -146783777 - L2 LINE L2 -1048 2266 1527 401 348 17 0 chr2 106473103 106473218 -146783365 + L2 LINE L2 3153 3269 -3 2292 93 0 3 chr2 106474584 106474884 -146781699 + AluSc SINE Alu 1 299 -10 1259 223 12 8 chr2 106475145 106475472 -146781111 - MLT1B LTR MaLR 0 390 8 281 221 15 15 chr2 106475513 106475581 -146781002 + tRNA-Met-i tRNA tRNA 1 68 -7 1889 142 10 7 chr2 106475597 106475907 -146780676 + L1MB3 LINE L1 5855 6165 -18 192 319 121 43 chr2 106475926 106476042 -146780541 + MIR SINE MIR 21 145 -63 4880 282 148 24 chr2 106477530 106479423 -146777160 + L2 LINE L2 40 2420 -893 2165 99 0 16 chr2 106479423 106479726 -146776857 - AluSx SINE Alu -14 298 1 4880 282 148 24 chr2 106479726 106480747 -146775836 + L2 LINE L2 2420 3313 0 300 236 0 0 chr2 106480747 106480836 -146775747 + (TGGA)n Simple_repeat Simple_repeat 2 90 0 546 246 0 0 chr2 106480851 106481018 -146775565 + (TGGA)n Simple_repeat Simple_repeat 2 168 0 428 321 136 53 chr2 106481410 106481712 -146774871 - L2 LINE L2 0 3272 2946 203 353 91 65 chr2 106481921 106482503 -146774080 + L2 LINE L2 1816 2426 -888 1894 138 3 10 chr2 106482503 106482814 -146773769 - AluSx SINE Alu -3 309 1 203 353 91 65 chr2 106482814 106483042 -146773541 + L2 LINE L2 2426 2647 -667 22 35 0 0 chr2 106483644 106483673 -146772910 + AT_rich Low_complexity Low_complexity 1 29 0 451 241 176 10 chr2 106484223 106484422 -146772161 + MIR SINE MIR 19 250 -12 389 253 0 23 chr2 106484456 106484543 -146772040 - LTR34 LTR ERV1 -4 695 611 3470 106 16 44 chr2 106484543 106484859 -146771724 + MER4B LTR ERV1 1 324 -455 3102 163 24 66 chr2 106484859 106485498 -146771085 + LTR9 LTR ERV1 1 612 0 3470 106 16 44 chr2 106485498 106485803 -146770780 + MER4B LTR ERV1 324 779 0 2630 139 14 147 chr2 106485803 106486512 -146770071 - LTR34 LTR ERV1 -85 614 1 1646 181 3 3 chr2 106486577 106486869 -146769714 + AluJo SINE Alu 2 293 -19 183 129 0 0 chr2 106488240 106488271 -146768312 + (TTTTC)n Simple_repeat Simple_repeat 2 32 0 996 134 0 0 chr2 106488347 106488541 -146768042 + AluSg/x SINE Alu 144 310 0 609 253 78 12 chr2 106489733 106489899 -146766684 - MER82 DNA MER2_type -1 652 476 33 85 0 0 chr2 106490813 106490895 -146765688 + AT_rich Low_complexity Low_complexity 1 82 0 496 329 93 18 chr2 106491418 106491643 -146764940 + MIR SINE MIR 3 244 -18 383 287 51 0 chr2 106492661 106492818 -146763765 - MER117 DNA MER1_type -27 170 6 955 314 125 34 chr2 106493735 106494446 -146762137 + L2 LINE L2 1867 2642 -672 1440 274 95 35 chr2 106494447 106494994 -146761589 + MLT1G LTR MaLR 11 590 0 291 337 105 41 chr2 106495039 106495343 -146761240 + L2 LINE L2 2724 3070 -202 226 325 12 108 chr2 106495414 106495580 -146761003 + L2 LINE L2 3122 3271 -1 677 333 19 0 chr2 106495747 106495954 -146760629 - MIR SINE MIR -18 244 34 591 376 61 29 chr2 106496124 106496568 -146760015 + L1MEc LINE L1 26 483 -5913 2596 252 65 57 chr2 106496749 106497451 -146759132 + L1MEc LINE L1 640 1335 -4880 2068 119 11 0 chr2 106497451 106497736 -146758847 + AluSx SINE Alu 1 288 -24 2596 252 65 57 chr2 106497736 106499190 -146757393 + L1MEc LINE L1 1335 2774 -3441 823 234 21 42 chr2 106499285 106499524 -146757059 + MLT1F LTR MaLR 309 542 0 411 236 114 0 chr2 106499535 106499658 -146756925 + L1ME2 LINE L1 6019 6155 -9 1102 50 0 0 chr2 106500096 106500236 -146756347 - L1P1 LINE L1 -427 5728 5589 1232 46 0 0 chr2 106500236 106500382 -146756201 + L1PA5 LINE L1 5997 6147 -7 439 231 151 0 chr2 106500389 106500588 -146755995 - LTR37B LTR ERV1 -4 464 236 60 0 0 0 chr2 106500772 106500832 -146755751 + AT_rich Low_complexity Low_complexity 1 60 0 186 71 0 0 chr2 106500832 106500860 -146755723 + (TAAAAA)n Simple_repeat Simple_repeat 5 32 0 188 324 27 27 chr2 106501808 106501882 -146754701 - MER5A DNA MER1_type -115 74 1 444 37 0 0 chr2 106502063 106502117 -146754466 + (TGG)n Simple_repeat Simple_repeat 3 56 0 2326 61 3 14 chr2 106502290 106502584 -146753999 + AluY SINE Alu 2 292 -19 289 312 186 7 chr2 106502669 106502841 -146753742 - MIR SINE MIR -50 212 15 200 333 10 29 chr2 106503149 106503251 -146753332 + GA-rich Low_complexity Low_complexity 6 105 0 2207 97 0 0 chr2 106503774 106504052 -146752531 - AluSg SINE Alu -32 278 1 398 252 0 61 chr2 106505361 106505508 -146751075 - MLT1J LTR MaLR -43 468 331 346 328 45 15 chr2 106506293 106506427 -146750156 + MIR3 SINE MIR 57 194 -14 2357 91 7 0 chr2 106506928 106507237 -146749346 + AluSq SINE Alu 3 313 0 22 0 0 0 chr2 106507449 106507471 -146749112 + AT_rich Low_complexity Low_complexity 1 22 0 204 67 0 0 chr2 106508110 106508140 -146748443 + (TG)n Simple_repeat Simple_repeat 1 30 0 237 247 12 37 chr2 106508579 106508660 -146747923 + (TATG)n Simple_repeat Simple_repeat 2 80 0 1000 221 23 37 chr2 106508719 106509067 -146747516 - L1ME1 LINE L1 -5 6161 5819 3104 240 30 3 chr2 106509101 106510064 -146746519 - L1MEc LINE L1 -2786 3429 2441 3001 237 31 19 chr2 106510211 106511223 -146745360 - L1MEc LINE L1 -3935 2461 1438 2807 252 121 19 chr2 106511261 106512446 -146744137 - L1MEc LINE L1 -5055 1341 36 33 56 0 0 chr2 106512535 106512589 -146743994 + AT_rich Low_complexity Low_complexity 1 54 0 302 264 165 0 chr2 106512630 106512751 -146743832 - L1ME1 LINE L1 -436 5685 5545 306 245 85 36 chr2 106512780 106512983 -146743600 - L1ME1 LINE L1 -675 5495 5282 260 214 18 0 chr2 106512990 106513046 -146743537 + (TG)n Simple_repeat Simple_repeat 2 58 0 554 306 60 6 chr2 106513723 106513906 -146742677 + MIR SINE MIR 45 237 -25 354 23 0 0 chr2 106514102 106514145 -146742438 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 1542 230 103 34 chr2 106515690 106516195 -146740388 - MLT1F LTR MaLR -2 540 1 198 0 0 0 chr2 106516407 106516429 -146740154 + (GA)n Simple_repeat Simple_repeat 1 22 0 2108 142 0 0 chr2 106517251 106517724 -146738859 - AluSq SINE Alu 0 475 3 205 200 22 0 chr2 106517848 106517893 -146738690 + GA-rich Low_complexity Low_complexity 3 48 0 645 152 107 0 chr2 106519057 106519169 -146737414 - FLAM_C SINE Alu -19 124 1 2208 117 3 0 chr2 106519276 106519576 -146737007 + AluSp SINE Alu 1 301 -12 1318 147 5 0 chr2 106520201 106520423 -146736160 - AluSg/x SINE Alu 0 308 86 198 259 19 0 chr2 106520607 106520661 -146735922 - MIR SINE MIR -148 114 60 554 146 0 0 chr2 106521090 106521179 -146735404 + AluS SINE Alu 221 309 0 223 153 14 56 chr2 106521735 106521826 -146734757 + (TATAA)n Simple_repeat Simple_repeat 1 87 0 541 42 112 4 chr2 106521831 106522095 -146734488 + (TA)n Simple_repeat Simple_repeat 1 292 0 201 96 115 0 chr2 106522105 106522157 -146734426 + (TATAA)n Simple_repeat Simple_repeat 1 58 0 343 61 0 0 chr2 106522168 106522217 -146734366 - MER51-int LTR ERV1 -2742 5074 5026 337 42 0 0 chr2 106522219 106522267 -146734316 - MER57B LTR ERV1 0 434 387 28 61 0 0 chr2 106522297 106522346 -146734237 + AT_rich Low_complexity Low_complexity 1 49 0 364 337 53 58 chr2 106523077 106523320 -146733263 + MIR SINE MIR 13 254 -8 252 309 0 0 chr2 106523833 106523901 -146732682 + (TG)n Simple_repeat Simple_repeat 1 68 0 189 227 45 0 chr2 106524199 106524243 -146732340 - L2 LINE L2 -17 3255 3210 2564 135 62 2 chr2 106524688 106525111 -146731472 - MER83 LTR ERV1 0 448 1 2346 79 0 0 chr2 106527106 106527397 -146729186 + AluY SINE Alu 1 291 -20 22 0 0 0 chr2 106527650 106527672 -146728911 + AT_rich Low_complexity Low_complexity 1 22 0 2286 278 132 17 chr2 106527758 106528906 -146727677 - L2 LINE L2 -150 3163 1880 271 330 36 27 chr2 106529574 106529686 -146726897 - L2 LINE L2 -1 3312 3200 1854 185 0 0 chr2 106529725 106530022 -146726561 - AluJb SINE Alu -15 297 1 1613 269 173 39 chr2 106530435 106531409 -146725174 + L2 LINE L2 2161 3273 -40 224 75 0 25 chr2 106532025 106532065 -146724518 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 1343 145 26 0 chr2 106532074 106532302 -146724281 - MLT2C2 LTR ERVL -56 408 175 463 274 62 45 chr2 106532684 106532972 -146723611 - L1ME2 LINE L1 -10 6154 5862 766 191 135 4 chr2 106533018 106533270 -146723313 - L1ME2 LINE L1 -285 5879 5595 263 172 0 17 chr2 106533281 106533339 -146723244 + (TA)n Simple_repeat Simple_repeat 2 58 0 336 164 0 14 chr2 106533345 106533418 -146723165 - L1ME2 LINE L1 -16 6148 6077 2090 137 52 35 chr2 106533428 106533831 -146722752 - MSTB1 LTR MaLR -12 420 11 1594 219 108 2 chr2 106533871 106534384 -146722199 - L1ME2 LINE L1 -132 6034 5461 41394 47 3 1 chr2 106534405 106540535 -146716048 + L1PA4 LINE L1 7 6153 -2 1448 258 74 16 chr2 106540532 106541284 -146715299 - L1ME2 LINE L1 -711 5451 4641 * 1929 156 0 0 chr2 106541819 106542104 -146714479 + AluJb SINE Alu 1 308 0 187 43 0 0 chr2 106542104 106542127 -146714456 + (TAA)n Simple_repeat Simple_repeat 2 180 0 1193 268 120 74 chr2 106542129 106542352 -146714231 - L2 LINE L2 -15 3298 3087 2420 185 17 8 chr2 106542352 106542870 -146713713 + L1MB5 LINE L1 5655 6174 0 1193 268 120 74 chr2 106542870 106543580 -146713003 - L2 LINE L2 -226 3087 2334 3303 162 48 15 chr2 106543638 106544318 -146712265 - L1PB4 LINE L1 0 6156 5454 240 268 85 65 chr2 106545425 106545578 -146711005 + MIR SINE MIR 20 175 -87 967 239 17 13 chr2 106546234 106546464 -146710119 + MIR SINE MIR 31 261 -1 32 0 0 0 chr2 106548378 106548410 -146708173 + AT_rich Low_complexity Low_complexity 1 32 0 704 278 58 33 chr2 106549609 106549850 -146706733 + MIR SINE MIR 12 258 -4 25 31 0 0 chr2 106549981 106550013 -146706570 + AT_rich Low_complexity Low_complexity 1 32 0 1866 147 4 0 chr2 106550364 106550630 -146705953 + AluSx SINE Alu 1 267 -45 381 22 0 0 chr2 106552080 106552126 -146704457 + (TG)n Simple_repeat Simple_repeat 2 47 0 2435 133 65 0 chr2 106553981 106554379 -146702204 - MSTA LTR MaLR -4 424 1 496 300 66 70 chr2 106554485 106554742 -146701841 + L2 LINE L2 3017 3272 0 608 264 30 0 chr2 106555079 106555246 -146701337 + MER97c DNA MER1_type? 11 182 -908 187 275 311 0 chr2 106556263 106556430 -146700153 - MIR SINE MIR 0 262 44 191 281 209 48 chr2 106557454 106557703 -146698880 + L2 LINE L2 2806 3094 -178 527 196 65 13 chr2 106560606 106560759 -146695824 + LTR33 LTR ERVL 10 170 -351 242 109 95 0 chr2 106562409 106562546 -146694037 + (TA)n Simple_repeat Simple_repeat 1 150 0 375 147 87 13 chr2 106562547 106562697 -146693886 + (TATAA)n Simple_repeat Simple_repeat 4 164 0 371 147 71 18 chr2 106562620 106562790 -146693793 + (TA)n Simple_repeat Simple_repeat 2 180 0 * 37 0 0 0 chr2 106562797 106562834 -146693749 + AT_rich Low_complexity Low_complexity 1 37 0 501 75 90 5 chr2 106562844 106563073 -146693510 + (TA)n Simple_repeat Simple_repeat 1 248 0 383 130 35 30 chr2 106563090 106563259 -146693324 + (TATAA)n Simple_repeat Simple_repeat 5 174 0 2684 233 81 52 chr2 106563293 106564277 -146692306 - L1ME LINE L1 -486 5678 4626 2115 95 7 14 chr2 106564277 106564562 -146692021 + AluSp SINE Alu 1 283 -30 2684 233 81 52 chr2 106564562 106565359 -146691224 - L1ME LINE L1 -1538 4626 3854 192 152 0 0 chr2 106566223 106566256 -146690327 + T-rich Low_complexity Low_complexity 1 33 0 597 288 83 22 chr2 106566676 106566905 -146689678 - MIR SINE MIR 0 262 20 2198 82 4 4 chr2 106567270 106567550 -146689033 + AluSg SINE Alu 27 306 -4 21 0 0 0 chr2 106568027 106568048 -146688535 + AT_rich Low_complexity Low_complexity 1 21 0 192 300 220 10 chr2 106568167 106568267 -146688316 + MIR3 SINE MIR 85 205 -3 336 259 161 0 chr2 106568648 106568760 -146687823 + MER5B DNA MER1_type 1 130 -48 258 288 0 45 chr2 106568927 106569059 -146687524 - L2 LINE L2 -115 3198 3073 205 176 0 0 chr2 106569059 106569093 -146687490 + (TG)n Simple_repeat Simple_repeat 1 34 0 391 274 55 52 chr2 106569491 106569879 -146686704 + L1ME LINE L1 5290 5679 -442 694 277 100 9 chr2 106569880 106570100 -146686483 - MIR SINE MIR 0 262 23 266 229 51 25 chr2 106570168 106570286 -146686297 + L1ME LINE L1 5772 5892 -229 2294 99 0 0 chr2 106570304 106570596 -146685987 - AluY SINE Alu -19 292 1 233 328 117 29 chr2 106571590 106571761 -146684822 - MIR SINE MIR -74 188 3 349 277 0 12 chr2 106572068 106572151 -146684432 - L2 LINE L2 -17 3255 3174 299 276 77 77 chr2 106573169 106573350 -146683233 + MER117 DNA MER1_type 10 190 -7 292 266 53 0 chr2 106573506 106573619 -146682964 + L1MC4a LINE L1 5783 5901 -1907 259 246 101 50 chr2 106574331 106574510 -146682073 + L1ME3A LINE L1 5759 5946 -224 2655 110 8 3 chr2 106574706 106575079 -146681504 - THE1C LTR MaLR 0 375 1 9660 123 39 24 chr2 106575079 106576635 -146679948 - THE1C-int LTR MaLR 0 1580 1 762 78 6 6 chr2 106576637 106576890 -146679693 - THE1C LTR MaLR -2 373 1 339 319 44 31 chr2 106580647 106580807 -146675776 + MIR SINE MIR 3 164 -98 1883 92 122 0 chr2 106581077 106581358 -146675225 - AluSq SINE Alu 0 313 1 181 302 0 0 chr2 106581479 106581522 -146675061 + MIR3 SINE MIR 112 154 -54 201 154 0 0 chr2 106581723 106581762 -146674821 + (TG)n Simple_repeat Simple_repeat 2 40 0 335 289 44 26 chr2 106582807 106583035 -146673548 - L1ME LINE L1 -352 5769 5538 2851 60 0 5 chr2 106583287 106583655 -146672928 + L1PA7 LINE L1 5786 6151 -3 2483 101 34 41 chr2 106583801 106584216 -146672367 + MER1A DNA MER1_type 118 529 0 2100 110 0 7 chr2 106584533 106584824 -146671759 + AluSc SINE Alu 4 292 -17 231 103 0 0 chr2 106585603 106585642 -146670941 + (TC)n Simple_repeat Simple_repeat 2 40 0 727 354 47 3 chr2 106586772 106587094 -146669489 - L3 LINE CR1 -29 1548 1213 1493 184 63 45 chr2 106587274 106587331 -146669252 - MLT1D LTR MaLR -118 387 333 2258 88 3 25 chr2 106587331 106587649 -146668934 - AluY SINE Alu 0 311 1 1493 184 63 45 chr2 106587649 106587971 -146668612 - MLT1D LTR MaLR -172 333 1 298 309 0 0 chr2 106588195 106588292 -146668291 - MIR SINE MIR -3 259 163 409 261 45 32 chr2 106588294 106588451 -146668132 + MIR SINE MIR 84 242 -20 209 363 37 58 chr2 106588596 106588786 -146667797 + L2 LINE L2 3076 3261 -11 318 349 41 12 chr2 106588807 106588979 -146667604 - L3 LINE CR1 -378 1199 1023 3156 127 107 37 chr2 106589060 106589195 -146667388 - MER39 LTR ERV1 0 707 583 2211 128 0 3 chr2 106589195 106589508 -146667075 + AluSx SINE Alu 1 312 0 3156 127 107 37 chr2 106589508 106590028 -146666555 - MER39 LTR ERV1 -124 583 6 2159 120 3 0 chr2 106592024 106592334 -146664249 + AluSx SINE Alu 1 311 0 477 340 91 5 chr2 106592557 106592754 -146663829 - MIR SINE MIR -35 227 14 1621 269 70 17 chr2 106592826 106593746 -146662837 - L1M4 LINE L1 -2973 3984 3017 262 232 98 18 chr2 106593933 106594045 -146662538 - L1M4 LINE L1 -5366 1493 1373 200 217 11 0 chr2 106597758 106597850 -146658733 + GA-rich Low_complexity Low_complexity 2 94 0 404 198 0 8 chr2 106597888 106598014 -146658569 + GA-rich Low_complexity Low_complexity 2 126 0 228 253 20 10 chr2 106598026 106598125 -146658458 + (CAGAGA)n Simple_repeat Simple_repeat 1 100 0 270 318 106 0 chr2 106598367 106598452 -146658131 - MIR SINE MIR -150 112 19 232 267 22 33 chr2 106598922 106599012 -146657571 + L1ME LINE L1 5591 5679 -442 269 261 9 0 chr2 106599028 106599143 -146657440 + (TA)n Simple_repeat Simple_repeat 1 116 0 363 339 37 55 chr2 106599517 106599735 -146656848 - MIR SINE MIR -40 222 9 2507 64 0 6 chr2 106600685 106600996 -146655587 + AluY SINE Alu 1 309 -2 1120 298 88 19 chr2 106601382 106602218 -146654365 - L1MC4a LINE L1 -751 5395 5008 199 179 75 75 chr2 106602581 106602648 -146653935 + MER5C DNA MER1_type 58 124 -200 188 179 0 26 chr2 106602745 106602784 -146653799 + MER5C DNA MER1_type 286 323 -1 23 68 0 0 chr2 106602956 106603000 -146653583 + AT_rich Low_complexity Low_complexity 1 44 0 241 318 85 23 chr2 106605411 106605540 -146651043 - L2 LINE L2 0 3313 3177 923 171 0 0 chr2 106605886 106606044 -146650539 + MER58B DNA MER1_type 184 341 0 922 273 48 0 chr2 106606139 106606388 -146650195 + MIR SINE MIR 2 262 0 779 271 67 17 chr2 106607798 106608038 -146648545 + MIR SINE MIR 2 253 -9 180 0 0 0 chr2 106611267 106611287 -146645296 + (TGAA)n Simple_repeat Simple_repeat 3 22 0 248 287 94 25 chr2 106611935 106612137 -146644446 - L1MC4 LINE L1 -2 8040 7825 739 250 87 57 chr2 106612207 106612575 -146644008 - L1MC4a LINE L1 -899 6909 6531 23 33 0 0 chr2 106612897 106612927 -146643656 + AT_rich Low_complexity Low_complexity 1 30 0 1104 239 81 45 chr2 106612953 106613422 -146643161 - L1MC4a LINE L1 -1808 6000 5515 226 306 45 36 chr2 106613614 106613836 -146642747 - L1MC4a LINE L1 -1134 5012 4789 * 5087 149 25 9 chr2 106613833 106614795 -146641788 - L1MA6 LINE L1 -5 6295 5319 * 6231 168 19 29 chr2 106614789 106616120 -146640463 - L1MA6 LINE L1 -1592 4554 3237 1076 186 24 24 chr2 106616117 106616364 -146640219 + L1 LINE L1 2630 2876 -3270 * 380 313 108 17 chr2 106616373 106616613 -146639970 - L1MC4a LINE L1 -2191 3955 3694 502 269 160 14 chr2 106616640 106616990 -146639593 + HAL1 LINE L1 811 1211 -1296 310 247 0 52 chr2 106617007 106617084 -146639499 + HAL1 LINE L1 1296 1368 -1139 521 244 40 11 chr2 106617092 106617268 -146639315 + HAL1 LINE L1 1546 1726 -781 22 94 0 0 chr2 106617520 106617584 -146638999 + AT_rich Low_complexity Low_complexity 1 64 0 1868 294 116 4 chr2 106617588 106618271 -146638312 - L2 LINE L2 -2254 1060 302 662 139 41 0 chr2 106618518 106618640 -146637943 + LTR23 LTR ERV1 1 127 -310 3956 152 24 19 chr2 106618654 106620390 -146636193 + MER61D-int LTR ERV1 627 2353 -2864 2253 115 0 0 chr2 106620390 106620685 -146635898 - AluSx SINE Alu -17 295 1 3956 152 24 19 chr2 106620685 106621142 -146635441 + MER61D-int LTR ERV1 2353 4825 -392 8249 133 35 14 chr2 106622111 106623760 -146632823 + MER61D-int LTR ERV1 2600 6994 -2 2932 118 98 2 chr2 106623763 106624220 -146632363 + MER61D LTR ERV1 1 501 0 7389 150 16 12 chr2 106624220 106625576 -146631007 + LTR23-int LTR ERV1 4310 5669 -662 352 275 37 0 chr2 106625594 106625703 -146630880 + LTR23-int LTR ERV1 4789 4901 -222 2228 142 25 30 chr2 106625825 106626262 -146630321 + LTR23 LTR ERV1 2 436 -1 518 214 103 112 chr2 106626539 106627074 -146629509 - MLT1H LTR MaLR -2 588 18 2065 165 70 0 chr2 106627179 106627579 -146629004 + MSTA LTR MaLR 1 428 0 193 270 9 108 chr2 106629797 106629908 -146626675 + MIR SINE MIR 47 146 -116 280 330 71 33 chr2 106630282 106630464 -146626119 + MER5A DNA MER1_type 1 189 0 182 270 135 27 chr2 106630642 106630716 -146625867 - MIR3 SINE MIR -4 204 123 * 189 351 0 40 chr2 106630709 106630783 -146625800 - MER5B DNA MER1_type -39 139 69 283 312 0 26 chr2 106630796 106630873 -146625710 - MIR3 SINE MIR -52 156 82 508 287 84 42 chr2 106631099 106631385 -146625198 - L2 LINE L2 -12 3301 3004 26 0 0 0 chr2 106636479 106636505 -146620078 + AT_rich Low_complexity Low_complexity 1 26 0 640 194 39 13 chr2 106636537 106636692 -146619891 + L1 LINE L1 4826 4984 -1162 7926 228 55 21 chr2 106636704 106642350 -146614233 - L1MA8 LINE L1 -51 6444 880 22 0 0 0 chr2 106642818 106642840 -146613743 + AT_rich Low_complexity Low_complexity 1 22 0 1758 202 0 3 chr2 106643255 106643552 -146613031 - AluJo SINE Alu -11 301 6 2003 94 3 62 chr2 106643565 106643874 -146612709 - AluSx SINE Alu -16 296 6 1381 344 73 20 chr2 106644185 106645037 -146611546 - L3 LINE CR1 -498 1079 183 340 228 18 0 chr2 106646761 106646875 -146609708 + (TA)n Simple_repeat Simple_repeat 1 116 0 319 316 134 54 chr2 106648754 106649090 -146607493 - L2 LINE L2 0 3272 2910 501 329 63 16 chr2 106649180 106649499 -146607084 - L2 LINE L2 -556 2758 2425 829 304 147 11 chr2 106649608 106650049 -146606534 - L2 LINE L2 -744 2570 2070 399 308 96 64 chr2 106650156 106650689 -146605894 - L2 LINE L2 -1157 2157 1608 345 283 40 65 chr2 106651465 106651639 -146604944 + MIR3 SINE MIR 8 172 -90 2217 118 0 0 chr2 106651639 106651936 -146604647 + AluSx SINE Alu 1 297 -15 345 283 40 65 chr2 106651936 106651982 -146604601 + MIR3 SINE MIR 172 218 -44 34 0 0 0 chr2 106652321 106652355 -146604228 + AT_rich Low_complexity Low_complexity 1 34 0 512 301 70 70 chr2 106653520 106654008 -146602575 + L3 LINE CR1 916 1403 -174 188 268 0 0 chr2 106654511 106654552 -146602031 + L2 LINE L2 3213 3253 -19 215 337 31 46 chr2 106654729 106654925 -146601658 + MIR SINE MIR 67 259 -3 241 292 15 28 chr2 106655469 106655604 -146600979 - MIR SINE MIR -23 239 25 198 118 0 0 chr2 106655629 106655663 -146600920 + (TTCA)n Simple_repeat Simple_repeat 2 35 0 2421 105 0 82 chr2 106656332 106656632 -146599951 - L1PB2 LINE L1 -3 6148 5886 1703 42 28 9 chr2 106656632 106656846 -146599737 + AluY SINE Alu 82 299 -12 2421 105 0 82 chr2 106656846 106656937 -146599646 - L1PB2 LINE L1 -265 5886 5789 354 268 21 0 chr2 106657609 106657706 -146598877 + MIR SINE MIR 93 191 -71 198 0 0 0 chr2 106657740 106657762 -146598821 + (TATG)n Simple_repeat Simple_repeat 3 24 0 2202 108 0 10 chr2 106657762 106658067 -146598516 - AluSx SINE Alu -10 302 1 192 374 0 11 chr2 106658205 106658296 -146598287 - MIR SINE MIR -142 120 31 199 62 0 47 chr2 106658306 106658341 -146598242 + MIR SINE MIR 113 146 -62 2051 147 3 7 chr2 106658711 106659018 -146597565 + AluJb SINE Alu 1 306 -6 2097 133 3 0 chr2 106659020 106659321 -146597262 + AluSx SINE Alu 1 302 -10 275 206 27 55 chr2 106659672 106659745 -146596838 - MIR3 SINE MIR -1 207 137 314 299 77 0 chr2 106660301 106660418 -146596165 - MIR SINE MIR -11 251 126 2134 114 23 0 chr2 106662606 106662905 -146593678 - AluSx SINE Alu -6 306 1 304 326 62 56 chr2 106663078 106663222 -146593361 - MER91A DNA MER1_type -14 182 38 392 204 222 9 chr2 106664454 106664562 -146592021 - MER94 DNA DNA -3 131 1 252 291 55 47 chr2 106664693 106664820 -146591763 + L1MD2 LINE L1 17 144 -6265 276 260 94 94 chr2 106665474 106665655 -146590928 + L1MD2 LINE L1 772 952 -5457 263 298 56 25 chr2 106665651 106665863 -146590720 + L1MD2 LINE L1 2047 2224 -4182 * 1583 213 67 0 chr2 106665878 106666249 -146590334 + L1MB1 LINE L1 5773 6168 0 597 216 33 0 chr2 106666256 106666438 -146590145 + L1MD2 LINE L1 2273 2460 -3946 326 207 46 17 chr2 106666700 106666874 -146589709 + (TA)n Simple_repeat Simple_repeat 2 180 0 1762 171 3 17 chr2 106666883 106667176 -146589407 - AluJb SINE Alu -23 289 1 8512 252 47 30 chr2 106667176 106667456 -146589127 + L1MD2 LINE L1 2584 2858 -3761 2253 100 3 3 chr2 106667456 106667756 -146588827 + AluSg SINE Alu 1 300 -10 8512 252 47 30 chr2 106667756 106669548 -146587035 + L1MD2 LINE L1 2858 4618 -2001 937 102 23 17 chr2 106669548 106669724 -146586859 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 207 0 0 0 chr2 106669724 106669747 -146586836 + (GGGA)n Simple_repeat Simple_repeat 3 25 0 8512 252 47 30 chr2 106669747 106671052 -146585531 + L1MD2 LINE L1 4617 6020 -599 310 288 0 42 chr2 106671066 106671184 -146585399 - LTR41 LTR ERVL -12 761 649 498 269 97 6 chr2 106671670 106671845 -146584738 - LTR41 LTR ERVL -578 195 5 1006 212 59 0 chr2 106671867 106672103 -146584480 + L1MD2 LINE L1 6017 6266 -353 384 229 86 9 chr2 106673294 106673399 -146583184 + MLT1J2 LTR MaLR 1 113 -337 2308 103 3 3 chr2 106674029 106674339 -146582244 - AluSg SINE Alu 0 310 1 1325 203 7 68 chr2 106675165 106675475 -146581108 - AluJo SINE Alu -17 295 5 1574 188 27 92 chr2 106676390 106676804 -146579779 + MLT1B LTR MaLR 4 390 0 231 36 0 0 chr2 106677730 106677758 -146578825 + (CAT)n Simple_repeat Simple_repeat 1 28 0 257 167 37 19 chr2 106677761 106677815 -146578768 - MIR SINE MIR -129 133 79 2258 220 65 30 chr2 106679116 106679808 -146576775 - L1M4 LINE L1 -1634 5323 4608 773 212 40 44 chr2 106679824 106680050 -146576533 - L1M4 LINE L1 -3704 3253 3029 4501 237 87 52 chr2 106680051 106681391 -146575192 - L1M4 LINE L1 -5472 1387 1 250 323 101 66 chr2 106681718 106681916 -146574667 - MIR3 SINE MIR -3 205 1 432 0 0 0 chr2 106682242 106682290 -146574293 + (TG)n Simple_repeat Simple_repeat 2 49 0 437 273 159 0 chr2 106682484 106682660 -146573923 - MIR SINE MIR 0 262 59 393 244 113 0 chr2 106682984 106683099 -146573484 - MER94 DNA DNA -6 128 1 191 268 0 0 chr2 106685796 106685837 -146570746 - L2 LINE L2 -17 3296 3256 511 214 6 17 chr2 106686696 106686869 -146569714 + GA-rich Low_complexity Low_complexity 4 174 0 665 112 0 0 chr2 106690390 106690479 -146566104 - AluSp/q SINE Alu -7 306 218 396 315 64 56 chr2 106690513 106690748 -146565835 - L1ME LINE L1 -313 5808 5567 2883 202 20 0 chr2 106690748 106691257 -146565326 - LTR53 LTR ERVL 0 519 1 396 315 64 56 chr2 106691257 106691412 -146565171 - L1ME LINE L1 -554 5567 5415 453 126 0 78 chr2 106691490 106691593 -146564990 - MER53 DNA DNA 0 189 95 418 278 89 24 chr2 106692216 106692385 -146564198 + MER5A DNA MER1_type 7 186 -3 333 227 9 45 chr2 106693726 106693836 -146562747 + L1MA9 LINE L1 6133 6238 -74 229 65 0 0 chr2 106693836 106693882 -146562701 - LTR66 LTR ERVL -171 439 394 190 191 15 15 chr2 106693885 106693953 -146562630 + (TA)n Simple_repeat Simple_repeat 2 69 0 284 64 56 19 chr2 106693964 106694025 -146562558 + L1MA9 LINE L1 6224 6291 0 229 286 16 32 chr2 106694171 106694288 -146562295 - MIR SINE MIR -61 147 34 311 289 132 31 chr2 106694425 106694584 -146561999 + MIR SINE MIR 84 258 -4 211 319 0 29 chr2 106694828 106694897 -146561686 - MIR SINE MIR -193 69 3 318 299 29 36 chr2 106695098 106695235 -146561348 + MIR SINE MIR 1 136 -126 662 267 129 5 chr2 106696157 106696367 -146560216 + MIR SINE MIR 3 238 -24 438 268 147 0 chr2 106696685 106696842 -146559741 + MIR SINE MIR 72 251 -11 252 0 0 0 chr2 106697211 106697239 -146559344 + (TG)n Simple_repeat Simple_repeat 2 29 0 2477 67 3 0 chr2 106698581 106698879 -146557704 - AluY SINE Alu -12 299 1 192 77 0 0 chr2 106698956 106698982 -146557601 + (TCCA)n Simple_repeat Simple_repeat 3 28 0 274 340 35 45 chr2 106699308 106699508 -146557075 - L2 LINE L2 -919 2395 2198 1872 189 12 57 chr2 106700274 106700681 -146555902 - MLT1B LTR MaLR 0 390 2 752 291 37 41 chr2 106700798 106701069 -146555514 - MLT1I LTR MaLR -8 401 132 421 252 70 9 chr2 106701132 106701247 -146555336 - MLT1I LTR MaLR -287 122 1 261 0 0 0 chr2 106701350 106701379 -146555204 + (T)n Simple_repeat Simple_repeat 1 29 0 2511 104 6 4 chr2 106701379 106701727 -146554856 - THE1B LTR MaLR -12 445 3 10841 109 30 46 chr2 106701729 106703334 -146553249 - THE1B-int LTR MaLR 0 1580 1 2638 124 6 6 chr2 106703334 106703698 -146552885 - THE1B LTR MaLR 0 364 1 2192 272 46 12 chr2 106704269 106705275 -146551308 + L1ME1 LINE L1 1973 2974 -3241 2899 235 48 49 chr2 106705287 106706450 -146550133 + L1ME1 LINE L1 4447 5609 -626 1856 181 53 99 chr2 106706450 106706924 -146549659 - LTR47A LTR ERVL 0 452 1 2899 235 48 49 chr2 106706924 106706951 -146549632 + L1ME1 LINE L1 5609 5635 -600 1969 140 3 32 chr2 106706951 106707265 -146549318 - AluSx SINE Alu -7 305 1 2899 235 48 49 chr2 106707265 106707862 -146548721 + L1ME1 LINE L1 5635 6230 -5 768 313 56 9 chr2 106708905 106709228 -146547355 - LTR16B LTR ERVL -2 462 125 335 60 20 0 chr2 106709301 106709351 -146547232 + (TAGA)n Simple_repeat Simple_repeat 2 52 0 238 161 54 0 chr2 106709552 106709645 -146546938 + (TG)n Simple_repeat Simple_repeat 2 99 0 1434 265 45 9 chr2 106710036 106710482 -146546101 + MLT1C LTR MaLR 6 467 0 2215 108 3 16 chr2 106710991 106711158 -146545425 - AluSq SINE Alu -12 301 138 1864 142 3 11 chr2 106711158 106711440 -146545143 - AluSx SINE Alu -19 293 14 2215 108 3 16 chr2 106711440 106711577 -146545006 - AluSq SINE Alu -175 138 1 303 284 194 31 chr2 106712438 106712660 -146543923 - LTR41 LTR ERVL -6 767 510 464 189 58 100 chr2 106713034 106713224 -146543359 - LTR41 LTR ERVL -590 183 2 2200 64 0 0 chr2 106714083 106714350 -146542233 - AluY SINE Alu -10 301 35 182 270 0 0 chr2 106716594 106716631 -146539952 + MIR SINE MIR 61 97 -165 278 262 67 67 chr2 106716856 106717005 -146539578 - MIR3 SINE MIR -45 163 15 420 363 24 14 chr2 106717020 106717232 -146539351 - MIR SINE MIR 0 262 49 1817 186 126 45 chr2 106719084 106719551 -146537032 - MLT1D LTR MaLR 0 505 1 837 234 14 116 chr2 106719552 106720009 -146536574 - MLT1D-int LTR MaLR -1 1734 955 252 121 2 84 chr2 106720171 106720246 -146536337 - MLT2C1 LTR ERVL 0 663 452 225 173 39 0 chr2 106720283 106720335 -146536248 + L1MC4 LINE L1 6614 6667 -1375 1229 222 39 51 chr2 106720338 106720694 -146535889 - MLT2C1 LTR ERVL -45 352 1 318 333 127 24 chr2 106720925 106721177 -146535406 + L3 LINE CR1 1298 1575 -2 31 0 0 0 chr2 106721502 106721533 -146535050 + AT_rich Low_complexity Low_complexity 1 31 0 36 40 0 0 chr2 106721860 106721910 -146534673 + AT_rich Low_complexity Low_complexity 1 50 0 385 324 209 22 chr2 106722370 106722734 -146533849 + L3 LINE CR1 1116 1547 -30 21 0 0 0 chr2 106723923 106723944 -146532639 + AT_rich Low_complexity Low_complexity 1 21 0 758 229 16 10 chr2 106725608 106725800 -146530783 - MER96B DNA MER1_type? -182 235 43 35 41 0 0 chr2 106726876 106726925 -146529658 + AT_rich Low_complexity Low_complexity 1 49 0 1493 164 51 10 chr2 106727478 106727771 -146528812 + L1MA4 LINE L1 5991 6295 -5 216 0 0 0 chr2 106728892 106728916 -146527667 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 474 237 213 16 chr2 106729381 106729634 -146526949 + MER5C DNA MER1_type 2 304 -20 314 275 87 36 chr2 106730755 106730893 -146525690 - MIR3 SINE MIR -43 165 21 198 377 164 19 chr2 106732292 106732451 -146524132 - L2 LINE L2 -1 3271 3090 1542 279 140 21 chr2 106732665 106732996 -146523587 - Charlie7 DNA MER1_type -1813 799 509 1534 197 3 37 chr2 106732996 106733296 -146523287 - AluJb SINE Alu -12 300 11 1542 279 140 21 chr2 106733296 106733663 -146522920 - Charlie7 DNA MER1_type -2103 509 18 307 303 131 67 chr2 106733805 106734165 -146522418 + L2 LINE L2 2855 3237 -35 315 85 0 0 chr2 106734589 106734636 -146521947 + (TG)n Simple_repeat Simple_repeat 2 48 0 222 360 51 29 chr2 106734788 106734963 -146521620 + MIR3 SINE MIR 7 185 -23 2237 79 0 14 chr2 106735930 106736220 -146520363 - AluSx SINE Alu -26 286 1 444 219 70 16 chr2 106736408 106736536 -146520047 - MER58 DNA MER1_type -16 2404 2270 * 803 218 18 0 chr2 106736534 106736704 -146519879 - MER58 DNA MER1_type -158 183 11 647 275 65 79 chr2 106737333 106738014 -146518569 - L1MC4a LINE L1 -1883 5925 5255 2219 108 3 0 chr2 106738044 106738340 -146518243 - AluSx SINE Alu -15 297 1 30 27 0 0 chr2 106738437 106738474 -146518109 + AT_rich Low_complexity Low_complexity 1 37 0 745 158 9 0 chr2 106738481 106738595 -146517988 - FLAM_C SINE Alu -16 117 3 229 313 39 0 chr2 106738679 106738807 -146517776 + L1M4 LINE L1 3731 3863 -2283 210 281 31 0 chr2 106739064 106739128 -146517455 + MIR SINE MIR 197 262 0 857 82 6 119 chr2 106740004 106740163 -146516420 + L1MB3 LINE L1 6042 6182 -1 1460 73 0 0 chr2 106741092 106741271 -146515312 - AluY SINE Alu -9 302 124 464 360 54 0 chr2 106741546 106741768 -146514815 + MIR SINE MIR 15 248 -14 233 333 28 0 chr2 106743097 106743169 -146513414 - MIR3 SINE MIR -23 185 112 225 0 0 0 chr2 106743518 106743543 -146513040 + (TTA)n Simple_repeat Simple_repeat 3 27 0 6318 16 0 0 chr2 106743543 106744215 -146512368 - L1PA3 LINE L1 -18 6137 5466 3099 29 0 0 chr2 106744215 106744673 -146511910 + L1PA3 LINE L1 5022 5479 -676 205 341 0 11 chr2 106745256 106745344 -146511239 - MIR3 SINE MIR -14 194 108 182 39 0 96 chr2 106745677 106745729 -146510854 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 1916 124 0 0 chr2 106745731 106745996 -146510587 - AluSx SINE Alu -47 265 1 549 279 19 42 chr2 106747555 106747770 -146508813 + MIR SINE MIR 53 262 0 26 0 0 0 chr2 106748524 106748550 -146508033 + AT_rich Low_complexity Low_complexity 1 26 0 346 231 64 29 chr2 106749015 106749190 -146507393 - MIR SINE MIR 0 262 37 2562 47 0 0 chr2 106749691 106749992 -146506591 - AluY SINE Alu -10 301 1 650 244 87 35 chr2 106750064 106750293 -146506290 - MIR SINE MIR -17 245 5 24 32 0 0 chr2 106750558 106750589 -146505994 + AT_rich Low_complexity Low_complexity 1 31 0 208 289 134 54 chr2 106751865 106752014 -146504569 + MIR SINE MIR 32 192 -70 267 275 73 55 chr2 106752112 106752221 -146504362 + MIR SINE MIR 13 123 -139 214 254 18 18 chr2 106752208 106752263 -146504320 + L2 LINE L2 3205 3259 -13 * 2486 136 67 19 chr2 106752306 106752769 -146503814 - MER31A LTR ERV1 0 485 1 1298 209 48 9 chr2 106752802 106753132 -146503451 - LTR37A LTR ERV1 0 426 84 292 263 0 63 chr2 106753674 106753769 -146502814 + MIR SINE MIR 72 160 -102 234 128 0 0 chr2 106753902 106753941 -146502642 + (GA)n Simple_repeat Simple_repeat 2 40 0 522 259 27 27 chr2 106754639 106754859 -146501724 - L1MC5 LINE L1 -36 7925 7706 419 278 36 26 chr2 106755310 106755504 -146501079 - L1ME3A LINE L1 -223 5947 5752 21 36 0 0 chr2 106755769 106755797 -146500786 + AT_rich Low_complexity Low_complexity 1 28 0 701 280 91 18 chr2 106755824 106756253 -146500330 + L1M4 LINE L1 4562 5019 -1127 2438 49 0 0 chr2 106756389 106756697 -146499886 + AluY SINE Alu 1 308 0 359 320 25 44 chr2 106757368 106757571 -146499012 - LTR67 LTR ERVL -6 551 353 1249 311 28 12 chr2 106757868 106758094 -146498489 - LTR16B LTR ERVL 0 464 226 378 0 0 0 chr2 106758094 106758136 -146498447 + (TG)n Simple_repeat Simple_repeat 2 43 0 1249 311 28 12 chr2 106758136 106758333 -146498250 - LTR16B LTR ERVL -238 226 34 660 345 49 21 chr2 106758670 106758995 -146497588 - ERVL LTR ERVL -927 4837 4504 2668 233 50 32 chr2 106759041 106759708 -146496875 + L1M4c LINE L1 906 1594 -4790 2153 94 24 0 chr2 106759708 106759995 -146496588 + AluSp SINE Alu 1 294 -19 2668 233 50 32 chr2 106759995 106760203 -146496380 + L1M4c LINE L1 1594 1797 -4587 1663 206 118 18 chr2 106761065 106761521 -146495062 + MLT1D LTR MaLR 4 505 0 1910 222 77 26 chr2 106761624 106762115 -146494468 + MLT1E2 LTR MaLR 111 626 0 2181 100 3 3 chr2 106762128 106762418 -146494165 - AluSg1 SINE Alu -17 292 3 407 365 51 3 chr2 106762420 106762858 -146493725 - ERVL LTR ERVL -2015 3470 3026 607 304 83 4 chr2 106763430 106763660 -146492923 - LTR33 LTR ERVL -228 293 46 282 353 54 31 chr2 106763691 106764045 -146492538 + ERVL LTR ERVL 4976 5337 -317 370 336 97 38 chr2 106764152 106764577 -146492006 + LTR16A1 LTR ERVL 1 450 -7 345 284 16 32 chr2 106764585 106764727 -146491856 + ERVL LTR ERVL 2481 2604 -2881 1213 151 52 40 chr2 106764739 106764990 -146491593 - Tigger2 DNA MER2_type -13 2705 2452 4381 151 25 3 chr2 106765045 106765775 -146490808 - Tigger2 DNA MER2_type -1972 746 1 372 326 40 17 chr2 106766049 106766224 -146490359 - LTR33 LTR ERVL -8 513 335 1785 326 73 27 chr2 106766244 106766689 -146489894 - HERV16 LTR ERVL -2198 3566 3143 1381 167 11 7 chr2 106766689 106766958 -146489625 + L1MA4 LINE L1 6022 6291 -9 1785 326 73 27 chr2 106766958 106768236 -146488347 - HERV16 LTR ERVL -2621 3143 1705 1889 113 4 4 chr2 106768291 106768557 -146488026 + AluSx SINE Alu 39 304 -8 2252 185 18 42 chr2 106768557 106769006 -146487577 + MLT1D LTR MaLR 34 471 -34 1047 288 59 25 chr2 106769023 106769464 -146487119 - HERV16 LTR ERVL -4539 457 2 1005 287 60 16 chr2 106769472 106769838 -146486745 - LTR16A LTR ERVL -7 443 62 721 323 53 17 chr2 106769894 106770526 -146486057 - ERVL LTR ERVL -3333 2431 1720 303 317 67 31 chr2 106771050 106771274 -146485309 - ERVL LTR ERVL -4561 1203 972 270 313 69 35 chr2 106771493 106771637 -146484946 - ERVL LTR ERVL -5141 623 475 286 335 67 17 chr2 106772072 106772251 -146484332 - LTR67 LTR ERVL -10 547 360 2616 103 5 13 chr2 106772567 106772944 -146483639 - THE1C LTR MaLR -1 374 1 214 377 31 31 chr2 106773107 106773266 -146483317 + L2 LINE L2 3151 3309 -4 227 290 16 16 chr2 106773338 106773400 -146483183 + L2 LINE L2 3232 3293 -20 672 326 22 13 chr2 106773495 106773719 -146482864 + MIR SINE MIR 17 242 -20 233 319 83 108 chr2 106773781 106773985 -146482598 + L2 LINE L2 3047 3245 -27 395 266 157 65 chr2 106774621 106774670 -146481913 + MIR SINE MIR 3 46 -216 2265 104 3 0 chr2 106774670 106774979 -146481604 - AluSp SINE Alu -3 310 1 395 266 157 65 chr2 106774979 106775158 -146481425 + MIR SINE MIR 46 252 -10 1978 261 29 31 chr2 106775580 106776361 -146480222 - L1MDb LINE L1 -1271 5135 4356 43133 30 21 1 chr2 106776388 106782418 -146474165 - L1HS LINE L1 -1 6154 1 1735 278 31 32 chr2 106782440 106783210 -146473373 - L1MDb LINE L1 -2099 4307 3539 * 6806 239 71 46 chr2 106783196 106786624 -146469959 - L1MA5 LINE L1 0 6886 3546 2013 148 0 0 chr2 106786624 106786915 -146469668 - AluSx SINE Alu -21 291 1 6806 239 71 46 chr2 106786915 106789191 -146467392 - L1MA5 LINE L1 -3340 3546 1422 481 110 30 30 chr2 106789191 106789291 -146467292 - L1MA4A LINE L1 0 6303 6204 6806 239 71 46 chr2 106789291 106790531 -146466052 - L1MA5 LINE L1 -5464 1422 215 6206 54 6 1 chr2 106790543 106791512 -146465071 - L1PA6 LINE L1 -120 6034 5064 962 49 0 0 chr2 106791512 106791633 -146464950 + L1PA5 LINE L1 6032 6153 -1 663 254 31 61 chr2 106791675 106791933 -146464650 - L1MA5 LINE L1 -5805 848 2 387 321 50 21 chr2 106791938 106792178 -146464405 - L1M3d LINE L1 -5643 248 2 2912 249 81 9 chr2 106792187 106793429 -146463154 - L1MDb LINE L1 -2883 3523 2211 192 77 0 0 chr2 106793501 106793527 -146463056 + (CA)n Simple_repeat Simple_repeat 2 27 0 914 270 38 16 chr2 106793593 106794010 -146462573 - L1MDb LINE L1 -4780 1807 1340 21 0 0 0 chr2 106794268 106794289 -146462294 + AT_rich Low_complexity Low_complexity 1 21 0 1690 133 56 12 chr2 106797470 106797655 -146458928 + L1MA3 LINE L1 5954 6129 -176 1978 156 0 0 chr2 106797655 106797975 -146458608 + AluSx SINE Alu 1 320 0 1690 133 56 12 chr2 106797975 106798125 -146458458 + L1MA3 LINE L1 6129 6305 0 270 285 32 81 chr2 106798141 106798264 -146458319 - MER5A DNA MER1_type -28 161 45 210 211 96 128 chr2 106799416 106799572 -146457011 + MIR SINE MIR 112 262 0 * 316 394 148 0 chr2 106799558 106799868 -146456715 + L2 LINE L2 2916 3271 -1 23 33 0 0 chr2 106800793 106800823 -146455760 + AT_rich Low_complexity Low_complexity 1 30 0 461 350 74 28 chr2 106801136 106801419 -146455164 - L1ME LINE L1 -504 5617 5322 521 210 114 54 chr2 106802119 106802286 -146454297 - MER5B DNA MER1_type 0 178 2 299 250 95 12 chr2 106802682 106802766 -146453817 + L2 LINE L2 3182 3272 0 772 169 0 0 chr2 106803170 106803294 -146453289 - FLAM_C SINE Alu -19 124 1 391 130 24 3 chr2 106804678 106804806 -146451777 - MER53 DNA DNA -19 170 2 215 169 70 14 chr2 106805385 106805456 -146451127 + (TTAA)n Simple_repeat Simple_repeat 4 78 0 297 294 46 61 chr2 106805943 106806289 -146450294 - L1ME LINE L1 -340 5781 5440 1960 133 17 3 chr2 106806289 106806582 -146450001 - AluSx SINE Alu -15 297 1 297 294 46 61 chr2 106806582 106806630 -146449953 - L1ME LINE L1 -681 5440 5393 2166 123 3 13 chr2 106807471 106807781 -146448802 + AluSg SINE Alu 1 307 -3 311 103 0 17 chr2 106808392 106808450 -146448133 + (TC)n Simple_repeat Simple_repeat 2 58 0 2856 199 58 41 chr2 106808489 106809409 -146447174 - L1ME2 LINE L1 -11 6153 5217 308 202 124 0 chr2 106809529 106809618 -146446965 - MLT1H LTR MaLR -15 534 435 698 263 23 50 chr2 106809623 106809923 -146446660 - MLT1H LTR MaLR -227 322 31 330 316 20 0 chr2 106810111 106810209 -146446374 - L2 LINE L2 0 3313 3214 377 332 121 0 chr2 106810566 106810789 -146445794 - L2 LINE L2 -667 2647 2398 4677 170 12 22 chr2 106810860 106811234 -146445349 - L1MB1 LINE L1 -1 6167 5791 1291 147 67 101 chr2 106811234 106811621 -146444962 - THE1C LTR MaLR 0 375 2 4677 170 12 22 chr2 106811621 106812476 -146444107 - L1MB1 LINE L1 -377 5791 4948 375 323 101 57 chr2 106812477 106812793 -146443790 - L2 LINE L2 -962 2352 2023 343 352 103 50 chr2 106812797 106813164 -146443419 - L2 LINE L2 -1671 1643 1236 221 53 53 0 chr2 106813164 106813202 -146443381 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 343 352 103 50 chr2 106813202 106813388 -146443195 - L2 LINE L2 -2078 1236 1061 2149 108 0 17 chr2 106815427 106815724 -146440859 - AluSq SINE Alu -21 292 1 2201 94 17 0 chr2 106815943 106816231 -146440352 - AluSx SINE Alu -18 294 2 2125 128 7 0 chr2 106817033 106817329 -146439254 + AluSg SINE Alu 1 298 -12 1801 151 116 40 chr2 106817481 106817879 -146438704 + MSTA LTR MaLR 1 428 0 206 200 44 0 chr2 106818122 106818167 -146438416 - L2 LINE L2 -16 3297 3251 24 32 0 0 chr2 106818737 106818768 -146437815 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr2 106820070 106820098 -146436485 + AT_rich Low_complexity Low_complexity 1 28 0 3349 308 79 7 chr2 106820100 106820879 -146435704 + L2 LINE L2 846 1750 -1564 2117 144 0 0 chr2 106820879 106821178 -146435405 - AluSx SINE Alu -13 299 1 3349 308 79 7 chr2 106821178 106821653 -146434930 + L2 LINE L2 1750 2190 -1124 353 241 101 58 chr2 106821745 106822033 -146434550 + MLT1J1 LTR MaLR 59 393 -53 1865 260 33 57 chr2 106822099 106822730 -146433853 + L2 LINE L2 2196 2811 -503 225 348 58 14 chr2 106822840 106822978 -146433605 + MIR SINE MIR 35 178 -84 390 212 0 0 chr2 106823023 106823122 -146433461 + (CAT)n Simple_repeat Simple_repeat 1 99 0 707 319 68 4 chr2 106823142 106823377 -146433206 + MIR SINE MIR 5 254 -8 1590 233 110 24 chr2 106823387 106823980 -146432603 + LTR48B LTR ERV1 1 644 0 222 37 0 0 chr2 106824133 106824160 -146432423 + (TGGA)n Simple_repeat Simple_repeat 4 30 0 183 265 20 0 chr2 106824803 106824852 -146431731 + L2 LINE L2 3264 3313 0 379 171 11 23 chr2 106824907 106824995 -146431588 + LTR48B LTR ERV1 400 486 -158 663 161 15 77 chr2 106825356 106825486 -146431097 + FLAM_A SINE Alu 1 122 -11 375 328 82 0 chr2 106826943 106827065 -146429518 - L2 LINE L2 0 3272 3141 308 316 48 72 chr2 106827824 106828033 -146428550 + MIR SINE MIR 46 249 -13 328 292 144 78 chr2 106829150 106830057 -146426526 - L1M2 LINE L1 -5472 1377 530 1446 153 22 65 chr2 106830790 106830921 -146425662 + AluJo SINE Alu 1 136 -176 1881 82 67 11 chr2 106830921 106831189 -146425394 + AluSg SINE Alu 1 283 -27 219 69 0 0 chr2 106831189 106831218 -146425365 + (TTAA)n Simple_repeat Simple_repeat 2 30 0 1446 153 22 65 chr2 106831218 106831406 -146425177 + AluJo SINE Alu 134 307 -5 22 35 0 0 chr2 106831519 106831548 -146425035 + AT_rich Low_complexity Low_complexity 1 29 0 309 337 85 52 chr2 106831676 106831946 -146424637 - L2 LINE L2 -77 3195 2917 259 239 28 28 chr2 106832701 106832772 -146423811 + MIR SINE MIR 175 245 -17 23 33 0 0 chr2 106833940 106833970 -146422613 + AT_rich Low_complexity Low_complexity 1 30 0 243 125 0 0 chr2 106834145 106834185 -146422398 + (ATG)n Simple_repeat Simple_repeat 3 42 0 25 31 0 0 chr2 106834806 106834838 -146421745 + AT_rich Low_complexity Low_complexity 1 32 0 6229 39 1 0 chr2 106835358 106836103 -146420480 - L1PA5 LINE L1 -4 6150 5405 5779 42 0 0 chr2 106836103 106836884 -146419699 + L1P LINE L1 4640 5420 -734 1332 202 23 30 chr2 106837036 106837163 -146419420 + AluJo SINE Alu 1 127 -185 294 29 0 0 chr2 106837163 106837198 -146419385 + (CAA)n Simple_repeat Simple_repeat 2 36 0 1332 202 23 30 chr2 106837198 106837372 -146419211 + AluJo SINE Alu 127 300 -12 606 301 173 5 chr2 106837463 106837832 -146418751 - L1MEc LINE L1 -2668 3461 3031 23 33 0 0 chr2 106837894 106837924 -146418659 + AT_rich Low_complexity Low_complexity 1 30 0 898 290 62 77 chr2 106838551 106838760 -146417823 - L1MEc LINE L1 -3119 3010 2799 692 210 0 0 chr2 106838760 106838879 -146417704 - FLAM_A SINE Alu -13 120 2 898 290 62 77 chr2 106838879 106839380 -146417203 - L1MEc LINE L1 -3330 2799 2311 512 275 22 63 chr2 106839798 106840020 -146416563 + MIR SINE MIR 37 249 -13 343 362 96 3 chr2 106840316 106840598 -146415985 - L1MEc LINE L1 -4727 1583 1276 308 270 35 65 chr2 106840601 106841035 -146415548 - L1MEc LINE L1 -5023 1096 676 341 367 69 52 chr2 106841080 106841601 -146414982 - L1MEc LINE L1 -5487 632 103 236 257 59 40 chr2 106841903 106842004 -146414579 + MIR SINE MIR 19 121 -87 1095 139 0 0 chr2 106842029 106842209 -146414374 + (TA)n Simple_repeat Simple_repeat 1 180 0 283 60 40 0 chr2 106842238 106842288 -146414295 + (TA)n Simple_repeat Simple_repeat 2 53 0 676 256 32 37 chr2 106843122 106843344 -146413239 - MIR SINE MIR 0 262 43 201 295 0 16 chr2 106843935 106843996 -146412587 + (CA)n Simple_repeat Simple_repeat 1 60 0 401 261 144 0 chr2 106844003 106844114 -146412469 + L2 LINE L2 3187 3313 0 600 238 50 6 chr2 106844354 106844514 -146412069 + MIR SINE MIR 46 212 -50 189 154 0 0 chr2 106845914 106845953 -146410630 + T-rich Low_complexity Low_complexity 1 39 0 335 294 100 31 chr2 106848057 106848217 -146408366 - Charlie8 DNA MER1_type -2246 171 1 588 158 0 0 chr2 106848747 106848829 -146407754 + AluJ/FLAM SINE Alu 3 84 -228 1774 192 0 0 chr2 106848936 106849228 -146407355 + AluJo SINE Alu 3 294 -18 293 355 46 28 chr2 106849395 106849612 -146406971 + Tigger8 DNA MER2_type 16 236 -430 1344 193 0 0 chr2 106849613 106849856 -146406727 - L1MB3 LINE L1 -56 6127 5885 2567 246 92 8 chr2 106850269 106850993 -146405590 - MER21B LTR ERV1 -60 803 19 461 218 0 0 chr2 106851013 106851091 -146405492 - MER21B LTR ERV1 -774 89 12 377 362 57 74 chr2 106851471 106851822 -146404761 + L2 LINE L2 2915 3259 -13 2128 60 0 0 chr2 106851827 106852100 -146404483 + L1PA6 LINE L1 5889 6161 0 2214 192 49 101 chr2 106852334 106853094 -146403489 - L1M4 LINE L1 -2126 4020 3301 2316 239 78 0 chr2 106853217 106853766 -146402817 - L1MDa LINE L1 -5932 608 17 734 126 0 34 chr2 106853796 106853915 -146402668 - 7SLRNA srpRNA srpRNA -1 319 205 30409 107 18 14 chr2 106854085 106856801 -146399782 + L1PA8 LINE L1 11 2715 -3772 198 0 0 0 chr2 106856801 106856823 -146399760 + (TA)n Simple_repeat Simple_repeat 2 23 0 30409 107 18 14 chr2 106856823 106860533 -146396050 + L1PA8 LINE L1 2715 6483 -4 858 291 138 34 chr2 106860983 106861800 -146394783 + L2 LINE L2 2359 3257 -56 210 37 0 0 chr2 106861963 106861990 -146394593 + (TTG)n Simple_repeat Simple_repeat 2 28 0 256 218 39 26 chr2 106862660 106862738 -146393845 + MER58 DNA MER1_type 2342 2420 0 273 26 0 0 chr2 106864231 106864270 -146392313 - AluY SINE Alu 0 300 262 3523 126 128 69 chr2 106864689 106865264 -146391319 - Tigger3(Golem) DNA MER2_type -1 3028 2402 1724 117 0 0 chr2 106865264 106865486 -146391097 - AluSq SINE Alu -91 222 1 3523 126 128 69 chr2 106865486 106865619 -146390964 - Tigger3(Golem) DNA MER2_type -627 2402 2278 657 173 10 0 chr2 106865613 106865717 -146390866 - Tigger3(Golem) DNA MER2_type -2924 105 1 * 868 171 123 126 chr2 106865747 106866097 -146390486 - MLT1A1 LTR MaLR 0 365 17 269 241 7 92 chr2 106866785 106866926 -146389657 + MIR SINE MIR 88 216 -46 2199 114 0 3 chr2 106866957 106867267 -146389316 + AluSx SINE Alu 3 311 0 457 143 7 204 chr2 106868186 106868333 -146388250 + MER45A DNA AcHobo 58 175 -3 1715 141 0 72 chr2 106869169 106869498 -146387085 + AluSx SINE Alu 1 307 0 203 349 15 0 chr2 106873631 106873697 -146382886 + MIR SINE MIR 35 101 -107 2076 107 27 20 chr2 106874026 106874324 -146382259 + AluSx SINE Alu 1 300 -12 303 28 0 0 chr2 106874478 106874514 -146382069 + (CA)n Simple_repeat Simple_repeat 1 36 0 2548 71 0 0 chr2 106875525 106875834 -146380749 + AluY SINE Alu 1 309 -2 325 280 154 6 chr2 106876031 106876213 -146380370 - MARNA DNA Mariner -108 478 270 2368 73 0 7 chr2 106876227 106876529 -146380054 - AluY SINE Alu -11 300 1 2070 125 3 22 chr2 106877820 106878131 -146378452 + AluSg SINE Alu 1 305 -5 232 244 0 0 chr2 106879466 106879511 -146377072 + (TG)n Simple_repeat Simple_repeat 2 46 0 2218 64 64 14 chr2 106880053 106880348 -146376235 - AluY SINE Alu -1 310 1 207 0 0 0 chr2 106880632 106880655 -146375928 + (A)n Simple_repeat Simple_repeat 1 23 0 189 0 0 0 chr2 106880882 106880903 -146375680 + (T)n Simple_repeat Simple_repeat 1 21 0 1088 202 56 65 chr2 106881765 106881856 -146374727 + MER33 DNA MER1_type 6 96 -2489 2156 125 0 10 chr2 106881856 106882167 -146374416 + AluSx SINE Alu 1 308 -4 1088 202 56 65 chr2 106882167 106882397 -146374186 + MER33 DNA MER1_type 96 324 0 2201 103 0 10 chr2 106883821 106884121 -146372462 - AluY SINE Alu -14 297 1 22 0 0 0 chr2 106884129 106884151 -146372432 + AT_rich Low_complexity Low_complexity 1 22 0 354 304 51 22 chr2 106885921 106886059 -146370524 - MER5A DNA MER1_type -5 184 43 240 325 241 0 chr2 106887715 106887798 -146368785 - L2 LINE L2 -36 3236 3134 433 388 69 20 chr2 106887909 106888316 -146368267 + L2 LINE L2 2836 3262 -10 2348 75 10 0 chr2 106889418 106889710 -146366873 - AluY SINE Alu -16 295 1 2273 174 81 23 chr2 106890681 106891152 -146365431 + MLT1D LTR MaLR 8 505 0 762 151 34 0 chr2 106891284 106891403 -146365180 - FLAM_C SINE Alu -19 124 2 537 332 96 5 chr2 106891405 106891625 -146364958 + MIR SINE MIR 23 262 0 263 231 125 10 chr2 106892588 106892692 -146363891 + MER103 DNA DNA 4 119 -47 342 271 6 11 chr2 106893647 106893828 -146362755 + CT-rich Low_complexity Low_complexity 1 180 0 2252 264 92 34 chr2 106894890 106896106 -146360477 - L2 LINE L2 -4 3309 2019 548 259 11 98 chr2 106896138 106896359 -146360224 - MIR SINE MIR -20 242 37 211 294 88 69 chr2 106896595 106896755 -146359828 - L2 LINE L2 -696 2618 2456 245 259 0 0 chr2 106897316 106897370 -146359213 + (CA)n Simple_repeat Simple_repeat 2 55 0 2039 134 0 10 chr2 106897816 106898114 -146358469 - AluSx SINE Alu -17 295 1 219 143 0 0 chr2 106898325 106898370 -146358213 + MIR SINE MIR 106 142 -66 2254 93 0 0 chr2 106898480 106898760 -146357823 + AluSc SINE Alu 1 311 0 181 97 0 0 chr2 106898760 106898791 -146357792 + (CAAA)n Simple_repeat Simple_repeat 2 168 0 1282 222 125 43 chr2 106899050 106899473 -146357110 - LTR40c LTR ERVL -7 458 1 1552 284 92 59 chr2 106899753 106900670 -146355913 - L2 LINE L2 -823 2491 1545 365 331 97 15 chr2 106902677 106902946 -146353637 - L1M4 LINE L1 -1424 4722 4432 209 263 51 13 chr2 106902958 106903114 -146353469 + (TA)n Simple_repeat Simple_repeat 1 162 0 370 314 46 16 chr2 106903368 106903560 -146353023 - L1M4 LINE L1 -2008 4138 3957 180 333 49 49 chr2 106903837 106903918 -146352665 + L2 LINE L2 3191 3271 -1 213 39 0 0 chr2 106903993 106904019 -146352564 + (TTA)n Simple_repeat Simple_repeat 2 27 0 812 182 0 0 chr2 106904019 106904140 -146352443 - AluSq/x SINE Alu -190 122 2 50 51 0 0 chr2 106904339 106904417 -146352166 + AT_rich Low_complexity Low_complexity 1 78 0 598 306 101 64 chr2 106905268 106905703 -146350880 - MLT1J LTR MaLR -9 502 52 403 0 75 0 chr2 106905791 106905858 -146350725 + (TA)n Simple_repeat Simple_repeat 1 72 0 641 275 93 5 chr2 106906109 106906302 -146350281 - MER63A DNA MER1_type 0 210 1 253 305 131 67 chr2 106908487 106908953 -146347630 - MLT1H LTR MaLR -13 536 41 2624 276 148 13 chr2 106908991 106909687 -146346896 - L2 LINE L2 -47 3266 2665 2088 146 24 78 chr2 106909687 106910098 -146346485 - MLT1B LTR MaLR -1 389 1 2624 276 148 13 chr2 106910098 106910742 -146345841 - L2 LINE L2 -648 2665 1747 242 179 60 15 chr2 106910850 106910917 -146345666 - L1MCa LINE L1 -4362 2064 1995 204 250 19 0 chr2 106910917 106910969 -146345614 + (CATATA)n Simple_repeat Simple_repeat 2 54 0 31 0 0 0 chr2 106911330 106911361 -146345222 + AT_rich Low_complexity Low_complexity 1 31 0 471 95 0 0 chr2 106911361 106911424 -146345159 - Alu SINE Alu -248 63 1 2626 211 31 17 chr2 106911424 106912008 -146344575 + MER82 DNA MER2_type 62 653 0 565 224 84 7 chr2 106913000 106913143 -146343440 - MIR SINE MIR -36 226 73 878 180 31 0 chr2 106914212 106914373 -146342210 + FRAM SINE Alu 1 40 0 1943 112 3 41 chr2 106914945 106915240 -146341343 + AluSx SINE Alu 1 284 -28 2883 22 0 0 chr2 106916070 106916388 -146340195 + AluYb8 SINE Alu 1 318 0 1861 41 0 14 chr2 106916404 106916623 -146339960 + L1PA5 LINE L1 5939 6154 0 1746 150 7 24 chr2 106917006 106917293 -146339290 + L1PA16 LINE L1 5872 6153 -13 21 0 0 0 chr2 106917328 106917349 -146339234 + AT_rich Low_complexity Low_complexity 1 21 0 393 228 323 6 chr2 106917766 106917933 -146338650 + MIR SINE MIR 22 241 -21 25 51 0 0 chr2 106920242 106920281 -146336302 + AT_rich Low_complexity Low_complexity 1 39 0 2171 110 3 0 chr2 106923559 106923849 -146332734 + AluSx SINE Alu 1 291 -21 2190 169 75 27 chr2 106924024 106924438 -146332145 + Tigger2a DNA MER2_type 1 434 0 307 136 0 0 chr2 106925769 106925813 -146330770 + MER116 DNA Mariner 37 80 0 337 245 295 0 chr2 106925941 106926080 -146330503 - MER5A DNA MER1_type 0 189 10 2243 81 10 14 chr2 106927070 106927365 -146329218 - AluY SINE Alu -17 294 1 259 246 88 26 chr2 106927792 106927906 -146328677 + MER5B DNA MER1_type 15 135 -43 203 147 0 0 chr2 106929617 106929651 -146326932 + (TCCA)n Simple_repeat Simple_repeat 1 34 0 244 232 116 0 chr2 106929910 106929979 -146326604 + MER91B DNA MER1_type 1 77 -113 509 250 141 16 chr2 106930605 106930797 -146325786 - MIR SINE MIR -37 225 10 342 123 0 0 chr2 106931690 106931747 -146324836 + (TG)n Simple_repeat Simple_repeat 2 58 0 1783 145 24 28 chr2 106931748 106932038 -146324545 - AluJb SINE Alu -23 289 1 478 289 194 50 chr2 106932051 106932411 -146324172 - L2 LINE L2 -58 3255 2844 33 25 0 0 chr2 106932526 106932566 -146324017 + AT_rich Low_complexity Low_complexity 1 40 0 1384 158 56 130 chr2 106932595 106933221 -146323362 + L1M3 LINE L1 4937 5518 -650 2216 116 7 0 chr2 106933221 106933531 -146323052 + AluSp SINE Alu 1 312 -1 1384 158 56 130 chr2 106933531 106933605 -146322978 + L1M3 LINE L1 5518 5596 -572 184 407 12 0 chr2 106933605 106933691 -146322892 - L2 LINE L2 -600 2714 2628 286 29 0 0 chr2 106934052 106934086 -146322497 - tRNA-Gly-GGA tRNA tRNA -37 38 5 240 304 0 33 chr2 106934312 106934404 -146322179 - L2 LINE L2 0 3313 3225 215 202 143 48 chr2 106934940 106935024 -146321559 + MIR3 SINE MIR 110 201 -7 213 154 0 0 chr2 106936634 106936673 -146319910 + (CA)n Simple_repeat Simple_repeat 2 40 0 521 299 68 36 chr2 106937424 106937862 -146318721 - L1ME4a LINE L1 -179 5942 5491 350 328 69 0 chr2 106938734 106938865 -146317718 + MIR SINE MIR 37 176 -86 191 271 43 0 chr2 106938877 106938947 -146317636 - MIR SINE MIR -41 221 149 * 225 266 177 0 chr2 106938938 106939017 -146317566 + MIR SINE MIR 170 262 0 21 0 0 0 chr2 106939111 106939132 -146317451 + AT_rich Low_complexity Low_complexity 1 21 0 189 231 19 0 chr2 106939309 106939361 -146317222 - MIR SINE MIR 0 262 210 196 338 70 0 chr2 106939766 106939837 -146316746 + MIR SINE MIR 117 192 -70 823 158 0 43 chr2 106940242 106940381 -146316202 - FLAM_A SINE Alu 0 133 1 2496 50 0 23 chr2 106940578 106940881 -146315702 - AluY SINE Alu -15 296 1 30 45 0 0 chr2 106941528 106941572 -146315011 + AT_rich Low_complexity Low_complexity 1 44 0 23 33 0 0 chr2 106942498 106942528 -146314055 + AT_rich Low_complexity Low_complexity 1 30 0 465 328 28 35 chr2 106942921 106943138 -146313445 + MIR SINE MIR 9 221 -41 219 139 0 0 chr2 106945866 106945902 -146310681 + (CA)n Simple_repeat Simple_repeat 2 37 0 224 313 12 12 chr2 106947659 106947742 -146308841 - L2 LINE L2 -481 2833 2751 1127 331 35 60 chr2 106948227 106948345 -146308238 + ERVL LTR ERVL 878 997 -4767 2229 88 10 7 chr2 106948345 106948641 -146307942 + AluSc SINE Alu 1 297 -12 1127 331 35 60 chr2 106948641 106949352 -146307231 + ERVL LTR ERVL 997 1686 -4078 936 188 97 5 chr2 106949362 106949417 -146307166 + LTR40c LTR ERVL 204 253 -212 2941 91 16 21 chr2 106949417 106949847 -146306736 + MSTA LTR MaLR 1 428 0 936 188 97 5 chr2 106949847 106949998 -146306585 + LTR40c LTR ERVL 253 429 -36 229 218 146 45 chr2 106950046 106950156 -146306427 + L1ME1 LINE L1 4443 4563 -1583 1361 249 19 21 chr2 106950215 106950241 -146306342 + L1ME1 LINE L1 5487 5512 -654 2707 92 0 13 chr2 106950241 106950620 -146305963 + THE1C LTR MaLR 1 374 -1 1361 249 19 21 chr2 106950620 106951036 -146305547 + L1ME1 LINE L1 5512 5934 -232 * 3989 204 103 122 chr2 106951024 106953384 -146303199 + L1MCa LINE L1 5 2321 -4105 812 215 12 0 chr2 106953384 106953556 -146303027 + FRAM SINE Alu 1 174 -2 1279 222 51 10 chr2 106953556 106954072 -146302511 + L1MCa LINE L1 2313 2854 -3572 1170 253 52 9 chr2 106954097 106954536 -146302047 + L1MCa LINE L1 2919 3376 -3050 1959 249 123 24 chr2 106954545 106955479 -146301104 - L1MCb LINE L1 -4543 2021 995 3584 196 62 15 chr2 106955508 106956630 -146299953 - L1MB8 LINE L1 -13 6165 4988 2153 104 17 0 chr2 106956630 106956917 -146299666 - AluSg SINE Alu -16 294 3 3584 196 62 15 chr2 106956917 106956948 -146299635 - L1MB8 LINE L1 -1190 4988 4960 812 224 20 10 chr2 106956953 106957149 -146299434 - L1MCa LINE L1 -6658 201 4 301 282 0 0 chr2 106957151 106957222 -146299361 - L1MCb LINE L1 -5056 989 919 236 313 0 0 chr2 106958043 106958110 -146298473 - MLT1J2 LTR MaLR -121 329 263 21 0 0 0 chr2 106959207 106959228 -146297355 + AT_rich Low_complexity Low_complexity 1 21 0 1540 189 20 42 chr2 106959230 106959637 -146296946 + L1MB8 LINE L1 5770 6167 -11 28 61 0 0 chr2 106959835 106959884 -146296699 + AT_rich Low_complexity Low_complexity 1 49 0 320 298 81 8 chr2 106959908 106960032 -146296551 + L1ME4a LINE L1 5943 6075 -46 34 24 0 0 chr2 106960042 106960083 -146296500 + AT_rich Low_complexity Low_complexity 1 41 0 1292 210 58 42 chr2 106960854 106961071 -146295512 - MLT1B LTR MaLR 0 390 178 2903 164 19 55 chr2 106961071 106961705 -146294878 - LTR9 LTR ERV1 0 612 2 1561 175 66 11 chr2 106961714 106962000 -146294583 - AluJo SINE Alu -10 302 1 1292 210 58 42 chr2 106962000 106962153 -146294430 - MLT1B LTR MaLR -219 171 4 419 347 0 0 chr2 106962198 106962345 -146294238 + MIR SINE MIR 116 262 0 25 0 0 0 chr2 106963562 106963587 -146292996 + AT_rich Low_complexity Low_complexity 1 25 0 785 155 0 0 chr2 106963587 106963703 -146292880 - FLAM_C SINE Alu -17 116 1 258 261 62 0 chr2 106963835 106963900 -146292683 - L2 LINE L2 -16 3297 3229 786 208 197 18 chr2 106964208 106964492 -146292091 - MER46C DNA MER2_type -2 336 2 188 271 62 0 chr2 106964532 106964580 -146292003 - L3b LINE CR1 -131 1452 1402 188 265 61 121 chr2 106965515 106965647 -146290936 + L2 LINE L2 3189 3312 -1 208 225 0 0 chr2 106966014 106966054 -146290529 + L2 LINE L2 3233 3272 0 225 210 16 0 chr2 106966253 106966315 -146290268 + T-rich Low_complexity Low_complexity 3 65 0 187 370 31 24 chr2 106966374 106966459 -146290124 - MIR SINE MIR -53 209 121 2069 137 0 3 chr2 106966459 106966758 -146289825 + AluSx SINE Alu 2 299 -13 187 370 31 24 chr2 106966758 106966799 -146289784 - MIR SINE MIR -141 121 82 2215 104 3 0 chr2 106966844 106967142 -146289441 - AluSg1 SINE Alu -10 299 1 1825 132 175 24 chr2 106967726 106968098 -146288485 - MSTA LTR MaLR 0 428 1 260 370 98 33 chr2 106968362 106968730 -146287853 + L3 LINE CR1 65 456 -1121 221 309 0 0 chr2 106968753 106968795 -146287788 - L2 LINE L2 -27 3245 3204 227 329 192 0 chr2 106969469 106969542 -146287041 + L2 LINE L2 3144 3230 -42 1229 223 41 33 chr2 106969641 106970081 -146286502 - MLT1D LTR MaLR 0 505 13 392 349 143 23 chr2 106970312 106970613 -146285970 + L3 LINE CR1 1240 1576 -1 2031 82 79 3 chr2 106970638 106970929 -146285654 - AluSq SINE Alu 0 313 1 22 35 0 0 chr2 106972142 106972171 -146284412 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr2 106972203 106972231 -146284352 + AT_rich Low_complexity Low_complexity 1 28 0 225 212 106 15 chr2 106974001 106974067 -146282516 - L2 LINE L2 -12 3301 3230 25 75 0 0 chr2 106974855 106974908 -146281675 + AT_rich Low_complexity Low_complexity 1 53 0 264 146 0 18 chr2 106975120 106975175 -146281408 - MLT2C2 LTR ERVL -2 513 460 210 224 0 0 chr2 106975176 106975225 -146281358 + (CATATA)n Simple_repeat Simple_repeat 2 50 0 1672 192 69 14 chr2 106975245 106975609 -146280974 - MLT2C2 LTR ERVL -80 384 1 334 284 59 10 chr2 106976983 106977085 -146279498 - MIR SINE MIR -64 144 38 225 308 78 78 chr2 106977911 106978284 -146278299 + L2 LINE L2 2876 3248 -65 1826 139 10 53 chr2 106978438 106978741 -146277842 + AluSx SINE Alu 1 290 -22 988 151 102 39 chr2 106981795 106982001 -146274582 - MER20 DNA MER1_type 0 219 1 400 297 207 4 chr2 106982280 106982512 -146274071 - L2 LINE L2 -21 3292 3014 359 314 88 0 chr2 106982712 106982871 -146273712 + MIR SINE MIR 90 262 0 234 0 0 0 chr2 106982972 106982998 -146273585 + (TG)n Simple_repeat Simple_repeat 2 27 0 1052 295 95 23 chr2 106983159 106983863 -146272720 - L2 LINE L2 -4 3309 2541 23 33 0 0 chr2 106984002 106984032 -146272551 + AT_rich Low_complexity Low_complexity 1 30 0 342 224 82 46 chr2 106984042 106984238 -146272345 - L1MC5 LINE L1 -45 7916 7714 1984 113 0 37 chr2 106984275 106984575 -146272008 - AluY SINE Alu 0 311 23 1527 241 44 44 chr2 106984584 106985178 -146271405 - L1MDa LINE L1 -1074 5466 4873 5895 21 0 0 chr2 106985180 106985891 -146270692 + L1P LINE L1 3749 4459 -1687 439 222 42 12 chr2 106985890 106986057 -146270526 - L1MDa LINE L1 -1662 4878 4707 * 5153 182 52 4 chr2 106986051 106987609 -146268974 - L1MC2 LINE L1 0 6344 4712 614 194 12 120 chr2 106987619 106987861 -146268722 - L1MDa LINE L1 -1817 4723 4508 * 8110 230 72 21 chr2 106987860 106989747 -146266836 - L1MDa LINE L1 -3316 3224 1120 2160 113 0 20 chr2 106989747 106990047 -146266536 + AluSq SINE Alu 1 294 -19 8110 230 72 21 chr2 106990047 106991208 -146265375 - L1MDa LINE L1 -5420 1120 19 1551 251 121 14 chr2 106991216 106991786 -146264797 - L2 LINE L2 -771 2543 1913 1997 118 9 62 chr2 106992056 106992379 -146264204 + AluSq SINE Alu 1 306 -7 41 48 0 0 chr2 106992395 106992457 -146264126 + AT_rich Low_complexity Low_complexity 1 62 0 23 33 0 0 chr2 106992924 106992954 -146263629 + AT_rich Low_complexity Low_complexity 1 30 0 992 190 6 0 chr2 106993668 106993842 -146262741 + FAM SINE Alu 1 175 0 4016 84 15 2 chr2 106994537 106995084 -146261499 - MER41A LTR ERV1 0 554 1 22 0 0 0 chr2 106996073 106996095 -146260488 + AT_rich Low_complexity Low_complexity 1 22 0 2241 116 0 0 chr2 106996243 106996545 -146260038 - AluSg SINE Alu -8 302 1 231 267 139 40 chr2 106996809 106996910 -146259673 - L2 LINE L2 -20 3252 3142 406 244 43 35 chr2 106996974 106997089 -146259494 - MIR SINE MIR -79 183 68 1101 239 48 23 chr2 106997235 106997587 -146258996 - MLT1A2 LTR MaLR -13 361 1 327 275 210 12 chr2 106997805 106997972 -146258611 + MIR SINE MIR 28 227 -35 36 23 0 0 chr2 106998064 106998107 -146258476 + AT_rich Low_complexity Low_complexity 1 43 0 478 183 151 0 chr2 106998133 106998226 -146258357 - FLAM_A SINE Alu -35 107 1 371 265 52 44 chr2 106998232 106998368 -146258215 - MER5B DNA MER1_type -41 137 1 240 258 225 0 chr2 107000150 107000239 -146256344 + L2 LINE L2 3159 3267 -5 206 283 0 0 chr2 107000555 107000615 -146255968 + (CA)n Simple_repeat Simple_repeat 1 60 0 2281 103 0 0 chr2 107000977 107001268 -146255315 - AluSx SINE Alu -21 291 1 26 64 0 0 chr2 107002019 107002066 -146254517 + AT_rich Low_complexity Low_complexity 1 47 0 279 0 0 0 chr2 107002074 107002105 -146254478 + (CA)n Simple_repeat Simple_repeat 2 32 0 180 245 0 0 chr2 107002145 107002198 -146254385 + (TA)n Simple_repeat Simple_repeat 1 53 0 264 253 147 0 chr2 107002305 107002400 -146254183 - MIR SINE MIR 0 262 154 1398 184 72 42 chr2 107003524 107003856 -146252727 + MER2 DNA MER2_type 1 342 -2 875 221 0 0 chr2 107003962 107004125 -146252458 + FRAM SINE Alu 7 169 -7 387 311 179 14 chr2 107004130 107004342 -146252241 - MIR SINE MIR -14 248 2 1657 265 98 28 chr2 107004358 107005394 -146251189 - L1MDa LINE L1 -4399 1681 573 25 31 0 0 chr2 107005457 107005489 -146251094 + AT_rich Low_complexity Low_complexity 1 32 0 284 326 74 19 chr2 107005627 107005842 -146250741 - L1MDa LINE L1 -5573 497 271 256 380 11 5 chr2 107006561 107006745 -146249838 - MER117 DNA MER1_type 0 197 13 265 283 103 97 chr2 107008189 107008334 -146248249 - MIR SINE MIR -9 253 108 2217 109 3 7 chr2 107008590 107008883 -146247700 + AluSx SINE Alu 2 293 -19 3505 122 66 21 chr2 107009415 107010040 -146246543 - MER39B LTR ERV1 0 653 1 1252 187 60 11 chr2 107010171 107010454 -146246129 - L1MB7 LINE L1 -16 6168 5872 405 0 0 0 chr2 107010830 107010875 -146245708 + (TG)n Simple_repeat Simple_repeat 2 46 0 851 252 18 11 chr2 107011271 107011549 -146245034 - LTR4 LTR ERV1 0 596 317 343 267 72 46 chr2 107011738 107011933 -146244650 - LTR4 LTR ERV1 -396 200 1 262 229 0 0 chr2 107014134 107014195 -146242388 + T-rich Low_complexity Low_complexity 1 61 0 2638 127 10 0 chr2 107014204 107014613 -146241970 - L1PB1 LINE L1 -8 6143 5731 1092 119 31 0 chr2 107015795 107015954 -146240629 + FRAM SINE Alu 1 163 -13 195 42 0 0 chr2 107016692 107016716 -146239867 + (TAA)n Simple_repeat Simple_repeat 1 24 0 647 278 57 44 chr2 107016719 107016967 -146239616 - MIR SINE MIR -5 257 7 1402 228 94 9 chr2 107018671 107019097 -146237486 + L1ME2 LINE L1 5695 6156 -8 3765 246 62 12 chr2 107021039 107022259 -146234324 - L1MC4 LINE L1 -302 7740 6460 423 56 0 0 chr2 107022409 107022463 -146234120 + (CA)n Simple_repeat Simple_repeat 2 55 0 308 187 0 13 chr2 107023918 107023993 -146232590 + CT-rich Low_complexity Low_complexity 3 76 0 22 0 0 0 chr2 107024119 107024141 -146232442 + AT_rich Low_complexity Low_complexity 1 22 0 299 292 135 0 chr2 107024457 107024553 -146232030 + L2 LINE L2 3192 3300 -13 342 0 0 0 chr2 107026543 107026581 -146230002 + (TAA)n Simple_repeat Simple_repeat 2 39 0 24 53 0 0 chr2 107027635 107027673 -146228910 + AT_rich Low_complexity Low_complexity 1 38 0 228 231 46 0 chr2 107027758 107027823 -146228760 + (TATG)n Simple_repeat Simple_repeat 1 68 0 342 0 0 0 chr2 107028778 107028816 -146227767 + (TCTA)n Simple_repeat Simple_repeat 2 39 0 180 209 33 22 chr2 107029534 107029625 -146226958 + (TATATG)n Simple_repeat Simple_repeat 2 93 0 206 310 28 35 chr2 107029628 107029770 -146226813 + (CATATA)n Simple_repeat Simple_repeat 4 144 0 615 358 77 35 chr2 107030329 107030810 -146225773 - L2 LINE L2 -5 3308 2808 485 255 136 25 chr2 107030826 107031061 -146225522 - L2 LINE L2 -769 2545 2285 273 283 221 21 chr2 107031065 107031210 -146225373 + L2 LINE L2 2777 2950 -364 2300 164 62 0 chr2 107031286 107031689 -146224894 + MSTA LTR MaLR 1 428 0 347 304 0 0 chr2 107031699 107031778 -146224805 + L2 LINE L2 2991 3069 -244 2136 66 0 0 chr2 107031780 107032036 -146224547 + AluY SINE Alu 42 297 -14 732 133 0 0 chr2 107032048 107032168 -146224415 + L1MA4 LINE L1 6173 6292 -8 502 338 110 24 chr2 107032175 107032847 -146223736 - L2 LINE L2 -1018 2296 1567 198 48 24 48 chr2 107032915 107032957 -146223626 + (GAA)n Simple_repeat Simple_repeat 2 42 0 2203 92 10 10 chr2 107033361 107033665 -146222918 - AluSg SINE Alu -6 304 1 2083 125 127 38 chr2 107034353 107034575 -146222008 + MSTA LTR MaLR 1 202 -226 2106 111 7 20 chr2 107034575 107034881 -146221702 + AluSc SINE Alu 1 302 -7 2083 125 127 38 chr2 107034881 107035051 -146221532 + MSTA LTR MaLR 202 428 0 313 294 67 0 chr2 107035266 107035385 -146221198 - L1ME4a LINE L1 -3 6118 5992 293 284 134 8 chr2 107035834 107035961 -146220622 - MIR SINE MIR -118 144 2 180 0 0 0 chr2 107036334 107036354 -146220229 + (T)n Simple_repeat Simple_repeat 1 20 0 412 277 218 20 chr2 107036398 107036600 -146219983 + MIR SINE MIR 11 252 -10 1924 92 80 0 chr2 107037857 107038148 -146218435 + AluSq SINE Alu 1 312 0 252 77 0 0 chr2 107040553 107040592 -146215991 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 5474 77 28 15 chr2 107040593 107041387 -146215196 - L1MA1 LINE L1 -10 6292 5489 2226 133 0 0 chr2 107041507 107041809 -146214774 + AluSx SINE Alu 1 302 -10 195 314 14 0 chr2 107042940 107043010 -146213573 + L3 LINE CR1 1504 1574 -3 2101 217 30 13 chr2 107043460 107044003 -146212580 - L1MD3 LINE L1 -8 7987 7436 229 316 31 20 chr2 107044614 107044712 -146211871 - MIR SINE MIR -81 127 29 247 243 29 43 chr2 107045008 107045078 -146211505 + MIR SINE MIR 114 182 -80 1893 154 73 18 chr2 107045324 107045707 -146210876 - L1MC1 LINE L1 0 6333 5930 2765 177 21 27 chr2 107045730 107046490 -146210093 - L1MC1 LINE L1 0 6154 5433 550 297 22 22 chr2 107046494 107046676 -146209907 - MIR SINE MIR -21 241 60 885 201 0 11 chr2 107047918 107048097 -146208486 - MER45A DNA AcHobo -1 177 1 380 93 0 130 chr2 107049419 107049480 -146207103 - L1MA7 LINE L1 -1 6290 6247 239 0 32 0 chr2 107049480 107049511 -146207072 + (TA)n Simple_repeat Simple_repeat 1 32 0 380 93 0 130 chr2 107049511 107049557 -146207026 - L1MA7 LINE L1 -44 6247 6197 202 311 85 66 chr2 107051850 107051956 -146204627 + MIR SINE MIR 20 127 -135 601 260 14 0 chr2 107054835 107054981 -146201602 - MIR SINE MIR -36 226 79 2260 96 0 3 chr2 107055410 107055701 -146200882 + AluSx SINE Alu 1 290 -22 456 287 18 42 chr2 107055743 107055910 -146200673 + MIR SINE MIR 87 249 -13 401 322 126 44 chr2 107056111 107056428 -146200155 - L2 LINE L2 -13 3259 2917 184 274 163 37 chr2 107056575 107056710 -146199873 - MIR SINE MIR -37 225 74 212 0 36 0 chr2 107056990 107057018 -146199565 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 595 77 0 0 chr2 107057723 107057801 -146198782 - MADE1 DNA Mariner 0 80 3 340 233 85 75 chr2 107057915 107058246 -146198337 - L1MC5 LINE L1 -89 7872 7539 26 0 0 0 chr2 107058502 107058528 -146198055 + AT_rich Low_complexity Low_complexity 1 26 0 182 293 0 0 chr2 107059188 107059246 -146197337 + MIR SINE MIR 96 153 -109 480 278 17 50 chr2 107061581 107061761 -146194822 + MER5B DNA MER1_type 2 175 -3 934 169 62 0 chr2 107062288 107062466 -146194117 - MER5A DNA MER1_type 0 189 1 236 238 124 57 chr2 107062514 107062619 -146193964 - LTR16A1 LTR ERVL 0 457 346 184 225 0 25 chr2 107062960 107063000 -146193583 - MER5C DNA MER1_type 0 324 286 358 241 54 45 chr2 107063171 107063283 -146193300 - MER5C DNA MER1_type -201 123 11 1969 127 73 48 chr2 107063294 107063507 -146193076 - THE1B LTR MaLR 0 364 137 2138 130 3 3 chr2 107063507 107063815 -146192768 + AluSx SINE Alu 1 308 -4 1969 127 73 48 chr2 107063815 107063956 -146192627 - THE1B LTR MaLR -227 137 1 10690 94 11 57 chr2 107063956 107065612 -146190971 - THE1B-int LTR MaLR 0 1580 1 2225 121 51 25 chr2 107065612 107065967 -146190616 - THE1B LTR MaLR 0 364 1 209 353 39 58 chr2 107066259 107066415 -146190168 + MIR SINE MIR 8 160 -102 1665 195 0 42 chr2 107066927 107067240 -146189343 - AluJb SINE Alu -12 300 1 488 351 34 31 chr2 107067460 107067753 -146188830 + L1ME3A LINE L1 1308 1601 -4941 1267 266 58 43 chr2 107067886 107068440 -146188143 - MLT1F1 LTR MaLR 0 567 1 236 306 39 111 chr2 107068445 107068860 -146187723 - MLT1F1-int LTR MaLR -5 1366 982 308 290 19 26 chr2 107068977 107069132 -146187451 - MLT1F1-int LTR MaLR -493 878 725 670 304 69 18 chr2 107069375 107069818 -146186765 - MLT1F1-int LTR MaLR -784 587 2 1040 277 42 12 chr2 107069819 107070155 -146186428 - MLT1F1 LTR MaLR 0 567 222 533 82 0 0 chr2 107070217 107070290 -146186293 - MSTB LTR MaLR -353 73 1 238 291 12 12 chr2 107070426 107070512 -146186071 - MLT1I LTR MaLR -263 146 61 303 300 0 62 chr2 107070579 107070709 -146185874 + L1MC4 LINE L1 6582 6703 -1339 * 308 266 0 43 chr2 107070647 107070741 -146185842 - L1MC4 LINE L1 -1339 6703 6614 2123 273 70 47 chr2 107070743 107072213 -146184370 + L1ME3A LINE L1 3294 4818 -1826 1428 199 83 47 chr2 107072213 107072574 -146184009 - MLT1A2 LTR MaLR 0 374 1 2123 273 70 47 chr2 107072574 107072986 -146183597 + L1ME3A LINE L1 4818 5219 -1425 652 257 57 112 chr2 107073074 107073855 -146182728 + L1ME3A LINE L1 5648 6381 -287 2298 104 7 3 chr2 107074557 107074864 -146181719 - AluSx SINE Alu -2 310 3 360 221 147 37 chr2 107075935 107076071 -146180512 + MIR3 SINE MIR 9 159 -49 2199 100 0 3 chr2 107076217 107076508 -146180075 + AluSg SINE Alu 1 290 -20 522 253 24 36 chr2 107076682 107076848 -146179735 - MLT1J LTR MaLR 0 511 348 485 146 0 10 chr2 107076964 107077060 -146179523 + (GGAA)n Simple_repeat Simple_repeat 3 97 0 236 315 112 0 chr2 107077105 107077194 -146179389 - MLT1J LTR MaLR -332 179 81 563 239 51 34 chr2 107077195 107077371 -146179212 + MLT1B LTR MaLR 2 180 -210 618 199 85 14 chr2 107077373 107077514 -146179069 + FRAM SINE Alu 22 172 -4 205 138 0 0 chr2 107077516 107077545 -146179038 + (CAG)n Simple_repeat Simple_repeat 1 29 0 492 269 35 0 chr2 107077574 107077719 -146178864 + MLT1B LTR MaLR 199 348 -42 808 218 98 126 chr2 107078125 107078675 -146177908 + MLT1F LTR MaLR 1 535 -7 2516 43 0 7 chr2 107078923 107079222 -146177361 + AluY SINE Alu 1 297 -14 270 0 0 0 chr2 107079222 107079252 -146177331 + (TA)n Simple_repeat Simple_repeat 2 31 0 197 182 0 0 chr2 107081112 107081145 -146175438 - MIR SINE MIR -11 251 219 2424 88 0 0 chr2 107081390 107081686 -146174897 - AluSq SINE Alu -17 296 1 502 275 70 18 chr2 107081694 107081865 -146174718 - MIR SINE MIR -70 192 13 22 56 0 0 chr2 107083908 107083944 -146172639 + AT_rich Low_complexity Low_complexity 1 36 0 42275 39 0 1 chr2 107084053 107090207 -146166376 - L1PA3 LINE L1 0 6155 9 297 114 0 0 chr2 107090250 107090294 -146166289 - MLT2B3 LTR ERVL 0 554 511 1063 150 30 64 chr2 107090299 107090532 -146166051 - MLT2D LTR ERVL -189 225 1 1424 103 84 5 chr2 107090645 107090858 -146165725 - MER30 DNA MER1_type 0 230 1 226 221 36 86 chr2 107090938 107091078 -146165505 + LTR16B LTR ERVL 319 451 -13 283 286 62 52 chr2 107092612 107092804 -146163779 - L1MC4 LINE L1 0 8042 7849 2143 188 40 38 chr2 107092927 107093455 -146163128 - L1MA10 LINE L1 0 6334 5806 249 337 51 35 chr2 107093490 107093885 -146162698 - L1MC4 LINE L1 -364 7678 7278 251 278 42 0 chr2 107094029 107094101 -146162482 - MIR3 SINE MIR -20 188 114 519 166 35 21 chr2 107094352 107094497 -146162086 - MER33 DNA MER1_type -27 297 151 1990 136 0 14 chr2 107094502 107094788 -146161795 + AluSx SINE Alu 1 282 -30 216 86 0 0 chr2 107094788 107094823 -146161760 + (TC)n Simple_repeat Simple_repeat 2 36 0 204 40 0 0 chr2 107094828 107094853 -146161730 + (TG)n Simple_repeat Simple_repeat 2 26 0 250 250 134 27 chr2 107094878 107094990 -146161593 - MER33 DNA MER1_type -180 144 21 465 267 146 0 chr2 107095360 107095525 -146161058 + MER45C DNA AcHobo 72 260 -693 531 245 154 11 chr2 107095594 107095782 -146160801 + MER45C DNA AcHobo 739 953 0 26 30 0 0 chr2 107096174 107096207 -146160376 + AT_rich Low_complexity Low_complexity 1 33 0 980 81 6 19 chr2 107096774 107096934 -146159649 + (TTTC)n Simple_repeat Simple_repeat 3 160 0 809 114 5 49 chr2 107096934 107097118 -146159465 + (TCCCC)n Simple_repeat Simple_repeat 3 178 0 1908 169 10 0 chr2 107097122 107097424 -146159159 - AluSx SINE Alu -7 305 1 23 0 0 0 chr2 107098838 107098861 -146157722 + AT_rich Low_complexity Low_complexity 1 23 0 393 75 0 0 chr2 107100064 107100117 -146156466 + (TG)n Simple_repeat Simple_repeat 2 54 0 1151 36 0 0 chr2 107100530 107100726 -146155857 + L1PA3 LINE L1 6015 6210 0 260 356 0 20 chr2 107100919 107101020 -146155563 + MIR SINE MIR 134 232 -30 3608 149 2 17 chr2 107104018 107104553 -146152030 + MER1A DNA MER1_type 1 527 0 6838 142 65 14 chr2 107105734 107106905 -146149678 + Tigger3b DNA MER2_type 1 1230 -1 262 260 100 30 chr2 107106968 107107068 -146149515 + MIR SINE MIR 113 219 -43 2212 146 52 0 chr2 107107262 107107626 -146148957 - MLT1B LTR MaLR -7 383 1 15197 30 7 0 chr2 107107735 107110200 -146146383 + L1PA4 LINE L1 3681 6154 -1 1148 141 0 0 chr2 107110207 107110370 -146146213 + L1PA16 LINE L1 6004 6166 0 266 170 0 21 chr2 107111201 107111248 -146145335 - U2 snRNA snRNA -142 46 1 22 35 0 0 chr2 107111348 107111377 -146145206 + AT_rich Low_complexity Low_complexity 1 29 0 288 294 100 35 chr2 107111918 107112088 -146144495 - MIR SINE MIR -27 235 55 22 56 0 0 chr2 107112173 107112209 -146144374 + AT_rich Low_complexity Low_complexity 1 36 0 29 70 0 0 chr2 107112477 107112534 -146144049 + AT_rich Low_complexity Low_complexity 1 57 0 21 71 0 0 chr2 107112574 107112616 -146143967 + AT_rich Low_complexity Low_complexity 1 42 0 960 283 79 13 chr2 107113305 107113609 -146142974 - MLT1I LTR MaLR 0 409 86 3115 155 71 42 chr2 107114686 107115274 -146141309 - MER6A DNA MER2_type 0 605 1 289 262 60 83 chr2 107115558 107115726 -146140857 - MIR SINE MIR -2 260 97 2793 241 47 7 chr2 107117117 107117719 -146138864 + MLT1E2 LTR MaLR 1 626 0 293 141 7 0 chr2 107118584 107118653 -146137930 - MLT2A1 LTR ERVL 0 554 451 273 163 0 0 chr2 107118653 107118702 -146137881 + (TA)n Simple_repeat Simple_repeat 2 50 0 2962 61 24 5 chr2 107118755 107119131 -146137452 - MLT2A1 LTR ERVL -60 384 2 4406 54 9 7 chr2 107119132 107119673 -146136910 - HERVL-A1 LTR ERVL 0 5654 5113 38980 80 9 3 chr2 107119673 107124651 -146131932 - HERVL-A1 LTR ERVL -647 5007 1 328 158 0 0 chr2 107124651 107124708 -146131875 - MLT2A1 LTR ERVL 0 520 464 258 77 51 26 chr2 107124710 107124788 -146131795 + (TA)n Simple_repeat Simple_repeat 1 80 0 2963 78 35 8 chr2 107124797 107125197 -146131386 - MLT2A1 LTR ERVL -31 413 3 354 255 99 43 chr2 107125184 107125345 -146131238 - MLT1I LTR MaLR -1 449 280 * 306 306 0 19 chr2 107125382 107125490 -146131093 - MLT1I LTR MaLR -290 119 14 228 67 0 0 chr2 107125498 107125528 -146131055 + (T)n Simple_repeat Simple_repeat 1 30 0 1924 141 63 36 chr2 107126117 107126480 -146130103 - THE1C LTR MaLR 0 375 3 9910 133 43 9 chr2 107126490 107128009 -146128574 - THE1C-int LTR MaLR -8 1572 1 2006 133 69 33 chr2 107128009 107128371 -146128212 - THE1C LTR MaLR 0 375 1 488 279 7 21 chr2 107128800 107128940 -146127643 + L2 LINE L2 3171 3308 -5 331 354 68 13 chr2 107128994 107129231 -146127352 + MIR SINE MIR 12 261 -1 22 35 0 0 chr2 107129464 107129493 -146127090 + AT_rich Low_complexity Low_complexity 1 29 0 2155 123 7 0 chr2 107129776 107130077 -146126506 - AluSq SINE Alu -10 303 1 211 264 0 19 chr2 107130623 107130676 -146125907 + CT-rich Low_complexity Low_complexity 3 54 0 206 211 115 0 chr2 107130791 107130843 -146125740 - MIR3 SINE MIR -29 179 122 309 226 57 75 chr2 107131237 107131343 -146125240 + MIR3 SINE MIR 90 193 -15 237 244 39 51 chr2 107131431 107131509 -146125074 - L2 LINE L2 -16 3297 3221 433 300 136 27 chr2 107131644 107131864 -146124719 - MIR SINE MIR 0 262 19 812 233 98 80 chr2 107133991 107134378 -146122205 - MLT1H LTR MaLR -142 407 14 213 273 0 0 chr2 107135759 107135803 -146120780 + polypurine Low_complexity Low_complexity 1 44 0 906 242 42 61 chr2 107135860 107136339 -146120244 - MLT1F LTR MaLR -3 543 22 190 256 0 0 chr2 107137605 107137648 -146118935 - L2 LINE L2 -89 3224 3182 264 178 0 0 chr2 107137873 107137918 -146118665 - MER5B DNA MER1_type -5 173 129 906 222 45 0 chr2 107137918 107138139 -146118444 + L1PA16 LINE L1 5936 6166 0 451 229 9 29 chr2 107138143 107138248 -146118335 - MER5B DNA MER1_type -49 129 27 274 262 19 39 chr2 107138372 107138475 -146118108 + MER5B DNA MER1_type 3 103 -75 241 267 82 104 chr2 107139077 107139212 -146117371 - MIR SINE MIR -60 148 17 254 369 113 3 chr2 107139932 107140214 -146116369 + L2 LINE L2 2951 3263 -50 234 128 0 0 chr2 107140223 107140262 -146116321 + (TGAA)n Simple_repeat Simple_repeat 4 42 0 198 0 0 0 chr2 107141296 107141318 -146115265 + (CA)n Simple_repeat Simple_repeat 2 23 0 24 0 0 0 chr2 107141832 107141856 -146114727 + AT_rich Low_complexity Low_complexity 1 24 0 262 297 0 0 chr2 107144551 107144625 -146111958 + MIR SINE MIR 63 136 -72 297 135 0 0 chr2 107145268 107145320 -146111263 + (TG)n Simple_repeat Simple_repeat 2 53 0 1506 175 21 35 chr2 107145327 107145613 -146110970 - AluJo SINE Alu -30 282 1 189 0 0 0 chr2 107146176 107146197 -146110386 + (A)n Simple_repeat Simple_repeat 1 21 0 868 199 0 12 chr2 107147281 107147442 -146109141 - FRAM SINE Alu -18 158 1 234 0 0 0 chr2 107147824 107147850 -146108733 + (GA)n Simple_repeat Simple_repeat 1 26 0 3608 257 73 26 chr2 107147865 107149404 -146107179 + L1MEc LINE L1 534 2144 -4252 192 77 0 0 chr2 107149705 107149731 -146106852 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 226 296 193 0 chr2 107149808 107149896 -146106687 + L2 LINE L2 3193 3297 -16 1427 237 32 29 chr2 107150066 107150441 -146106142 + MLT1B LTR MaLR 15 390 0 980 99 0 8 chr2 107151288 107151419 -146105164 - AluSg/x SINE Alu -87 225 96 4716 174 6 8 chr2 107151519 107151588 -146104995 - L1P LINE L1 -769 5377 5309 2585 68 0 0 chr2 107151588 107151899 -146104684 - AluY SINE Alu 0 311 1 4716 174 6 8 chr2 107151899 107152692 -146103891 - L1P LINE L1 -837 5309 4517 745 158 9 0 chr2 107152905 107153019 -146103564 + FLAM_C SINE Alu 3 117 -16 30 27 0 0 chr2 107153026 107153063 -146103520 + AT_rich Low_complexity Low_complexity 1 37 0 2211 105 3 0 chr2 107153160 107153456 -146103127 + AluSx SINE Alu 3 297 -15 569 279 75 59 chr2 107153544 107154167 -146102416 + L1MC4a LINE L1 5293 5925 -1883 781 218 18 0 chr2 107154796 107154966 -146101617 + MER58 DNA MER1_type 11 183 -158 418 219 70 16 chr2 107154964 107155092 -146101491 + MER58 DNA MER1_type 2270 2404 -16 * 2224 103 3 3 chr2 107155280 107155580 -146101003 + AluSg SINE Alu 1 300 -10 6535 264 48 26 chr2 107155611 107157372 -146099211 + L1M4 LINE L1 2633 4353 -1793 937 102 23 17 chr2 107157372 107157548 -146099035 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 207 0 0 0 chr2 107157548 107157571 -146099012 + (GGGA)n Simple_repeat Simple_repeat 3 25 0 6535 264 48 26 chr2 107157571 107158376 -146098207 + L1M4 LINE L1 4352 5258 -888 273 57 0 0 chr2 107160525 107160560 -146096023 + (TG)n Simple_repeat Simple_repeat 2 36 0 801 192 66 25 chr2 107160671 107160869 -146095714 - MER3 DNA MER1_type -2 207 2 693 30 40 0 chr2 107161420 107161519 -146095064 + (TTTTA)n Simple_repeat Simple_repeat 2 104 0 255 307 107 5 chr2 107164599 107164775 -146091808 + MIR SINE MIR 4 196 -66 408 304 38 114 chr2 107166653 107167127 -146089456 - L2 LINE L2 -8 3264 2827 260 181 14 14 chr2 107167539 107167611 -146088972 - L1ME4a LINE L1 -1 6120 6049 494 240 141 80 chr2 107167616 107167848 -146088735 - MLT1J2 LTR MaLR -5 441 184 503 297 117 41 chr2 107167848 107168266 -146088317 + MLT1J2 LTR MaLR 1 450 0 494 240 141 80 chr2 107168266 107168357 -146088226 - MLT1J2 LTR MaLR -262 184 100 507 293 180 23 chr2 107168477 107168733 -146087850 + LTR16A LTR ERVL 162 457 0 218 288 0 0 chr2 107168828 107168894 -146087689 + (TA)n Simple_repeat Simple_repeat 2 67 0 303 266 23 23 chr2 107169455 107169583 -146087000 - L1ME LINE L1 -405 5716 5589 28 99 0 0 chr2 107170084 107170175 -146086408 + AT_rich Low_complexity Low_complexity 1 91 0 470 340 65 22 chr2 107170271 107170595 -146085988 - L1ME LINE L1 -1680 4466 4129 23 33 0 0 chr2 107170754 107170784 -146085799 + AT_rich Low_complexity Low_complexity 1 30 0 295 271 23 23 chr2 107171033 107171166 -146085417 - L1ME LINE L1 -2365 3781 3649 28 48 0 0 chr2 107171324 107171366 -146085217 + AT_rich Low_complexity Low_complexity 1 42 0 533 308 108 29 chr2 107171388 107171842 -146084741 - L1ME LINE L1 -2709 3437 2948 31 26 0 0 chr2 107172035 107172073 -146084510 + AT_rich Low_complexity Low_complexity 1 38 0 315 313 120 36 chr2 107172182 107172758 -146083825 - L1ME LINE L1 -3374 2772 2149 28 0 0 0 chr2 107172935 107172963 -146083620 + AT_rich Low_complexity Low_complexity 1 28 0 647 226 141 11 chr2 107172973 107173150 -146083433 + MIR SINE MIR 33 232 -30 446 146 0 2 chr2 107173150 107173402 -146083181 + AluJb SINE Alu 1 305 -7 2062 124 0 13 chr2 107173480 107173778 -146082805 + AluSx SINE Alu 9 302 -10 2510 37 10 7 chr2 107175216 107175516 -146081067 + AluY SINE Alu 1 301 -10 1940 111 0 8 chr2 107175732 107175994 -146080589 - AluSx SINE Alu -37 275 16 25 51 0 0 chr2 107176689 107176728 -146079855 + AT_rich Low_complexity Low_complexity 1 39 0 1232 182 26 105 chr2 107177508 107177859 -146078724 - MLT1A1 LTR MaLR -42 323 1 1495 141 114 27 chr2 107178071 107178372 -146078211 + AluSq SINE Alu 1 324 0 455 347 138 7 chr2 107178626 107179067 -146077516 - LTR33 LTR ERVL -11 510 12 219 69 0 0 chr2 107179088 107179117 -146077466 + (TG)n Simple_repeat Simple_repeat 1 29 0 2526 57 0 22 chr2 107180630 107180948 -146075635 - AluY SINE Alu 0 311 1 1085 239 144 72 chr2 107181771 107182244 -146074339 - MLT1F LTR MaLR -35 507 1 276 239 48 102 chr2 107182309 107182476 -146074107 - MIR SINE MIR -58 204 47 680 217 8 0 chr2 107183065 107183194 -146073389 - MER20 DNA MER1_type -1 218 89 207 0 0 0 chr2 107183196 107183219 -146073364 + (CA)n Simple_repeat Simple_repeat 1 23 0 320 326 0 0 chr2 107185250 107185336 -146071247 + (TG)n Simple_repeat Simple_repeat 1 86 0 2581 35 3 16 chr2 107188293 107188606 -146067977 + AluY SINE Alu 1 309 -2 197 238 0 95 chr2 107188910 107188973 -146067610 + MER5A DNA MER1_type 1 57 -132 281 259 49 0 chr2 107189511 107189592 -146066991 - MIR SINE MIR -84 124 40 1826 167 106 3 chr2 107189823 107190182 -146066401 - MSTD LTR MaLR 0 396 1 246 62 0 0 chr2 107192389 107192421 -146064162 + (CA)n Simple_repeat Simple_repeat 2 33 0 210 143 0 0 chr2 107192674 107192709 -146063874 + (T)n Simple_repeat Simple_repeat 1 35 0 467 122 0 12 chr2 107193770 107193852 -146062731 + (TCCC)n Simple_repeat Simple_repeat 4 84 0 538 280 98 27 chr2 107194514 107194739 -146061844 - MIR SINE MIR -1 261 21 231 204 0 0 chr2 107195161 107195205 -146061378 + CT-rich Low_complexity Low_complexity 4 47 0 235 266 0 16 chr2 107196416 107196480 -146060103 + CT-rich Low_complexity Low_complexity 2 64 0 718 348 88 26 chr2 107196520 107197341 -146059242 + L2 LINE L2 1528 2399 -915 223 347 129 35 chr2 107197564 107197881 -146058702 + L2 LINE L2 2967 3313 0 441 301 74 40 chr2 107197967 107198143 -146058440 + MIR3 SINE MIR 6 187 -21 561 292 113 59 chr2 107198320 107198745 -146057838 + MLT1J LTR MaLR 28 475 -36 791 278 30 26 chr2 107198849 107199127 -146057456 + MLT1G1 LTR MaLR 1 320 -275 489 307 37 26 chr2 107199139 107199328 -146057255 - MIR SINE MIR -70 192 2 23 33 0 0 chr2 107199481 107199511 -146057072 + AT_rich Low_complexity Low_complexity 1 30 0 272 346 103 21 chr2 107200530 107200764 -146055819 + MIR SINE MIR 9 261 -1 288 254 15 0 chr2 107201111 107201178 -146055405 + Tigger5 DNA MER2_type 2256 2323 0 288 304 71 30 chr2 107201914 107202082 -146054501 + MIR SINE MIR 46 220 -42 2004 110 65 0 chr2 107202124 107202414 -146054169 + AluSg SINE Alu 2 310 0 262 317 92 25 chr2 107205555 107205675 -146050908 + MIR3 SINE MIR 45 172 -36 3063 180 15 11 chr2 107207201 107207817 -146048766 + L1PB4 LINE L1 5535 6152 -4 1686 164 48 0 chr2 107208324 107208636 -146047947 + AluSx SINE Alu 3 327 0 180 380 0 0 chr2 107208951 107209001 -146047582 + MIR SINE MIR 98 147 -61 219 352 130 9 chr2 107209925 107210033 -146046550 - MIR SINE MIR -73 135 15 302 303 69 32 chr2 107210114 107210302 -146046281 - L1ME3A LINE L1 -1 6169 5975 2977 190 38 5 chr2 107210360 107211293 -146045290 - L1MC4 LINE L1 -554 6059 5265 6346 203 91 65 chr2 107211310 107213065 -146043518 - L1MC4 LINE L1 -2556 3870 2162 2068 169 15 0 chr2 107213065 107213402 -146043181 + MER7A DNA MER2_type 4 343 -3 6346 203 91 65 chr2 107213402 107213985 -146042598 - L1MC4 LINE L1 -4264 2162 1596 311 258 0 0 chr2 107213985 107214047 -146042536 - MER7A DNA MER2_type -281 67 6 6346 203 91 65 chr2 107214047 107214936 -146041647 - L1MC4 LINE L1 -4830 1596 478 2249 135 12 0 chr2 107214936 107215269 -146041314 + MER1B DNA MER1_type 1 337 0 6346 203 91 65 chr2 107215269 107215400 -146041183 - L1MC4 LINE L1 -5948 478 352 22 80 0 0 chr2 107215573 107215623 -146040960 + AT_rich Low_complexity Low_complexity 1 50 0 1278 178 58 54 chr2 107215623 107215899 -146040684 - AluJo SINE Alu -30 282 6 1151 204 95 7 chr2 107215905 107216190 -146040393 - L1MC4 LINE L1 -6089 337 28 4679 161 12 16 chr2 107216298 107216522 -146040061 + L1 LINE L1 4102 4325 -1821 2105 104 16 3 chr2 107216522 107216830 -146039753 + AluSx SINE Alu 1 312 0 4679 161 12 16 chr2 107216830 107217538 -146039045 + L1 LINE L1 4325 5030 -1116 831 273 28 50 chr2 107217535 107217894 -146038689 - L1ME LINE L1 -397 5773 5423 * 216 0 0 0 chr2 107218867 107218891 -146037692 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 402 216 31 0 chr2 107219139 107219236 -146037347 + L1PA12 LINE L1 6056 6155 -13 203 173 19 0 chr2 107220601 107220653 -146035930 + GA-rich Low_complexity Low_complexity 2 54 0 26 0 0 0 chr2 107220918 107220944 -146035639 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr2 107221583 107221605 -146034978 + AT_rich Low_complexity Low_complexity 1 22 0 339 233 0 56 chr2 107223246 107223336 -146033247 - L2 LINE L2 -14 3299 3215 677 200 65 32 chr2 107223354 107223509 -146033074 - MER63 DNA MER1_type -275 787 2 194 187 66 99 chr2 107223509 107223600 -146032983 - L2 LINE L2 -113 3200 3113 354 339 96 17 chr2 107223699 107223876 -146032707 + MIR3 SINE MIR 3 193 -15 1751 98 7 65 chr2 107224174 107224450 -146032133 - AluSg SINE Alu -11 299 40 274 259 82 109 chr2 107224722 107224916 -146031667 + MIR SINE MIR 14 190 -72 1585 184 10 20 chr2 107230146 107230439 -146026144 + AluJo SINE Alu 5 294 -18 280 372 109 16 chr2 107231022 107231205 -146025378 + MIR SINE MIR 15 214 -48 207 100 0 0 chr2 107231434 107231464 -146025119 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 319 235 78 10 chr2 107232517 107232619 -146023964 + Charlie7 DNA MER1_type 84 192 -2420 615 307 25 13 chr2 107232876 107233114 -146023469 + Charlie7 DNA MER1_type 215 455 -2157 329 244 87 0 chr2 107233220 107233335 -146023248 + Charlie7 DNA MER1_type 599 723 -1889 226 356 79 0 chr2 107234781 107234882 -146021701 + L2 LINE L2 3155 3263 -9 296 74 0 111 chr2 107235734 107235768 -146020815 - L1MA8 LINE L1 0 6291 6269 2160 112 3 0 chr2 107235768 107236063 -146020520 + AluSp SINE Alu 1 296 -17 296 74 0 111 chr2 107236063 107236109 -146020474 - L1MA8 LINE L1 -22 6269 6220 26 30 0 0 chr2 107236707 107236740 -146019843 + AT_rich Low_complexity Low_complexity 1 33 0 1978 122 34 0 chr2 107236798 107237092 -146019491 - AluSx SINE Alu -8 304 1 196 230 15 0 chr2 107238602 107238737 -146017846 + (TA)n Simple_repeat Simple_repeat 2 138 0 21 0 0 0 chr2 107238746 107238767 -146017816 + AT_rich Low_complexity Low_complexity 1 21 0 395 290 40 0 chr2 107238843 107238943 -146017640 + L2 LINE L2 3210 3313 0 1427 310 121 48 chr2 107239219 107240547 -146016036 + L2 LINE L2 1599 3036 -277 24 0 0 0 chr2 107241210 107241234 -146015349 + AT_rich Low_complexity Low_complexity 1 24 0 245 341 48 36 chr2 107242580 107242747 -146013836 - MIR3 SINE MIR -7 201 33 474 311 88 34 chr2 107243462 107243903 -146012680 + MLT1L LTR MaLR 151 615 0 25 0 0 0 chr2 107244597 107244622 -146011961 + AT_rich Low_complexity Low_complexity 1 25 0 195 42 0 0 chr2 107244879 107244903 -146011680 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 2052 133 0 29 chr2 107245858 107246174 -146010409 - AluSp SINE Alu -5 308 2 598 35 24 35 chr2 107246263 107246348 -146010235 - L1PA5 LINE L1 -5 6149 6066 296 335 78 12 chr2 107246689 107246856 -146009727 + MIR SINE MIR 24 201 -61 440 238 84 14 chr2 107247283 107247426 -146009157 - MLT1D LTR MaLR -48 457 305 287 299 26 34 chr2 107247506 107247623 -146008960 + MLT1K LTR MaLR 391 506 -82 11157 216 42 47 chr2 107248171 107248541 -146008042 - L1MA9 LINE L1 0 7272 6902 216 0 0 0 chr2 107248541 107248565 -146008018 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2229 92 0 0 chr2 107248565 107248847 -146007736 - AluY SINE Alu -29 282 1 11157 216 42 47 chr2 107248847 107252759 -146003824 - L1MA9 LINE L1 -369 6903 3340 2144 129 3 0 chr2 107252759 107253070 -146003513 - AluSx SINE Alu 0 312 1 11157 216 42 47 chr2 107253070 107254911 -146001672 - L1MA9 LINE L1 -3932 3340 1491 775 217 116 0 chr2 107255151 107255340 -146001243 - L1MB5 LINE L1 0 6174 5964 390 267 0 0 chr2 107255342 107255514 -146001069 + (TA)n Simple_repeat Simple_repeat 1 172 0 339 261 0 22 chr2 107255540 107255632 -146000951 - L1MC4 LINE L1 -1339 6703 6614 1744 246 27 6 chr2 107255633 107256109 -146000474 - L1M4 LINE L1 -1019 5127 4642 266 426 42 0 chr2 107256138 107256328 -146000255 - MLT-int LTR MaLR -444 1291 1094 2496 211 15 20 chr2 107256344 107256883 -145999700 - MLT1A1-int LTR MaLR -973 762 227 283 236 0 14 chr2 107256990 107257062 -145999521 + L1ME1 LINE L1 5797 5867 -297 * 8524 185 7 16 chr2 107257041 107259828 -145996755 + L1PB1 LINE L1 3394 6150 -1 1059 233 94 47 chr2 107259878 107260217 -145996366 - MLT1A1 LTR MaLR -5 360 6 498 232 9 0 chr2 107260226 107260338 -145996245 - MLT1A1-int LTR MaLR -4 1731 1619 1987 134 45 31 chr2 107260338 107260697 -145995886 + THE1B LTR MaLR 1 364 0 5247 101 101 2 chr2 107260697 107261487 -145995096 + THE1B-int LTR MaLR 1 868 -712 1296 168 52 41 chr2 107261527 107261795 -145994788 + THE1B LTR MaLR 94 364 0 3724 253 20 112 chr2 107261799 107262964 -145993619 - MLT1A1-int LTR MaLR -75 1576 622 1732 156 48 38 chr2 107262964 107263335 -145993248 - THE1C LTR MaLR 0 375 1 3724 253 20 112 chr2 107263335 107263905 -145992678 - MLT1A1-int LTR MaLR -1029 622 1 988 246 130 20 chr2 107263905 107264259 -145992324 - MSTD LTR MaLR -1 395 3 596 245 14 7 chr2 107264267 107264414 -145992169 + L1ME1 LINE L1 5903 6031 -135 605 184 14 57 chr2 107264420 107264561 -145992022 - AluJo SINE Alu -177 135 1 248 269 23 100 chr2 107264561 107264614 -145991969 + L1ME1 LINE L1 6040 6095 -71 2339 19 0 8 chr2 107264614 107264880 -145991703 - AluY SINE Alu -7 304 41 248 269 23 100 chr2 107264880 107264956 -145991627 + L1ME1 LINE L1 6095 6159 -7 45 34 0 0 chr2 107265066 107265125 -145991458 + AT_rich Low_complexity Low_complexity 1 59 0 14226 178 19 14 chr2 107265125 107269256 -145987327 - L1MA2 LINE L1 0 7723 3571 1108 186 17 59 chr2 107269256 107269493 -145987090 - AluJb SINE Alu 0 312 86 19448 170 35 15 chr2 107269494 107272987 -145983596 - L1MA2 LINE L1 -3984 3581 17 4883 75 11 0 chr2 107274743 107275394 -145981189 - L1P3 LINE L1 -4776 1685 1028 1096 120 6 0 chr2 107275386 107275569 -145981014 - L1P LINE L1 -4599 1547 1364 * 12989 80 1 0 chr2 107275569 107278217 -145978366 + L1PA7 LINE L1 3543 6149 -5 210 195 49 0 chr2 107278784 107278825 -145977758 + polypurine Low_complexity Low_complexity 2 44 0 23 0 0 0 chr2 107279181 107279204 -145977379 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 107279565 107279587 -145976996 + AT_rich Low_complexity Low_complexity 1 22 0 234 0 0 0 chr2 107280190 107280216 -145976367 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 258 32 0 0 chr2 107281022 107281053 -145975530 + (TG)n Simple_repeat Simple_repeat 2 32 0 21 36 0 0 chr2 107282031 107282059 -145974524 + AT_rich Low_complexity Low_complexity 1 28 0 2400 74 10 0 chr2 107282405 107282703 -145973880 - AluY SINE Alu -10 301 1 257 219 0 31 chr2 107283014 107283078 -145973505 + HERVL LTR ERVL 3185 3246 -2408 385 337 24 16 chr2 107283670 107283919 -145972664 + HERVL LTR ERVL 3873 4123 -1531 261 0 0 0 chr2 107284224 107284253 -145972330 + (CA)n Simple_repeat Simple_repeat 1 29 0 602 221 0 5 chr2 107285024 107285240 -145971343 + CT-rich Low_complexity Low_complexity 1 214 0 377 308 62 19 chr2 107286974 107287129 -145969454 + L1M4 LINE L1 2211 2379 -3767 7533 31 0 0 chr2 107287129 107288441 -145968142 + L1PA3 LINE L1 4840 6152 -3 377 308 62 19 chr2 107288441 107288493 -145968090 + L1M4 LINE L1 2379 2427 -3719 8041 201 21 18 chr2 107288845 107291174 -145965409 + L1MA5A LINE L1 3262 5598 -1967 644 202 64 17 chr2 107291532 107291705 -145964878 + MER5A DNA MER1_type 9 189 0 212 299 96 13 chr2 107291705 107291807 -145964776 - MIR SINE MIR -52 156 45 9089 209 22 27 chr2 107292329 107293533 -145963050 - L1 LINE L1 -1283 4863 3654 390 42 0 0 chr2 107293533 107293581 -145963002 + (TCCC)n Simple_repeat Simple_repeat 1 48 0 1045 123 11 6 chr2 107293581 107293760 -145962823 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 9089 209 22 27 chr2 107293760 107294826 -145961757 - L1 LINE L1 -2490 3656 2605 5584 147 44 17 chr2 107294823 107296202 -145960381 + L1MA5A LINE L1 6138 7565 -151 * 2035 157 30 28 chr2 107296202 107296565 -145960018 + THE1B LTR MaLR 1 364 0 5584 147 44 17 chr2 107296565 107296717 -145959866 + L1MA5A LINE L1 7565 7711 -5 208 217 17 17 chr2 107297053 107297113 -145959470 + (TA)n Simple_repeat Simple_repeat 1 60 0 9151 174 86 43 chr2 107297579 107299766 -145956817 + L1MC1 LINE L1 20 2298 -4128 1433 66 0 6 chr2 107299768 107299951 -145956632 + AluY SINE Alu 112 293 -18 3164 241 36 17 chr2 107299966 107301031 -145955552 + L1MC1 LINE L1 2369 3415 -3011 4732 241 99 32 chr2 107301044 107302919 -145953664 + L1MC1 LINE L1 3515 5514 -912 468 222 11 6 chr2 107302928 107303104 -145953479 + (TA)n Simple_repeat Simple_repeat 2 178 0 1506 186 9 68 chr2 107303104 107303128 -145953455 + L1MC1 LINE L1 5602 5626 -987 8477 117 25 6 chr2 107303128 107304387 -145952196 - HSMAR1 DNA Mariner 0 1287 4 1506 186 9 68 chr2 107304387 107304509 -145952074 + L1MC1 LINE L1 5626 5754 -859 254 119 24 0 chr2 107304509 107304551 -145952032 - MADE1 DNA Mariner -36 44 2 1506 186 9 68 chr2 107304551 107304817 -145951766 + L1MC1 LINE L1 5754 5991 -622 16570 213 23 7 chr2 107304822 107309721 -145946862 - L1PA13 LINE L1 -11 7590 2625 6416 261 36 21 chr2 107309733 107311364 -145945219 - L1PA13 LINE L1 -5925 1656 2 1600 154 18 0 chr2 107311367 107311640 -145944943 + L1MC1 LINE L1 5986 6263 -350 965 228 100 36 chr2 107311624 107312063 -145944520 + L1MEc LINE L1 611 1077 -5319 * 1598 251 131 13 chr2 107312071 107312970 -145943613 + L1MEc LINE L1 1754 2732 -3483 * 5598 225 76 73 chr2 107312967 107313774 -145942809 + L1MD1 LINE L1 526 1329 -5211 258 32 0 0 chr2 107313774 107313805 -145942778 + (CA)n Simple_repeat Simple_repeat 2 32 0 5598 225 76 73 chr2 107313805 107314829 -145941754 + L1MD1 LINE L1 1329 2364 -4176 1866 134 0 39 chr2 107314829 107315135 -145941448 + AluSx SINE Alu 1 294 -18 5598 225 76 73 chr2 107315135 107315460 -145941123 + L1MD1 LINE L1 2364 2686 -3854 347 254 33 0 chr2 107315473 107315595 -145940988 + L1MD1 LINE L1 2722 2847 -3693 1010 162 140 35 chr2 107315595 107315823 -145940760 + MER44D DNA MER2_type 1 522 -87 4529 138 39 34 chr2 107315825 107316676 -145939907 - Tigger3b DNA MER2_type -371 860 6 1148 96 6 6 chr2 107316726 107316892 -145939691 + MER30 DNA MER1_type 1 166 -64 756 132 7 25 chr2 107316907 107317060 -145939523 + L1MC/D LINE L1 5378 5523 -637 1078 288 50 11 chr2 107317078 107317553 -145939030 + L1MD1 LINE L1 5047 5540 -1000 3024 201 64 15 chr2 107317561 107318292 -145938291 + L1MD1 LINE L1 5764 6530 -106 292 211 0 0 chr2 107318300 107318357 -145938226 + L1MD2 LINE L1 6290 6346 -13 27 73 0 0 chr2 107318438 107318493 -145938090 + AT_rich Low_complexity Low_complexity 1 55 0 2597 234 50 51 chr2 107318506 107319640 -145936943 + L1ME1 LINE L1 4972 6293 -41 225 268 18 0 chr2 107319677 107319733 -145936850 + CT-rich Low_complexity Low_complexity 1 57 0 2188 105 0 3 chr2 107319901 107320196 -145936387 - AluSg SINE Alu -16 294 1 245 333 62 33 chr2 107320888 107321128 -145935455 + L2 LINE L2 2824 3070 -202 6367 208 51 26 chr2 107321133 107322768 -145933815 - L1MC1 LINE L1 -122 7938 6276 1506 241 172 23 chr2 107322766 107323778 -145932805 - L1MC1 LINE L1 -743 5683 4572 * 647 246 72 33 chr2 107323803 107324164 -145932419 - L1MC1 LINE L1 -5018 1408 1034 548 246 163 48 chr2 107324165 107324417 -145932166 - L1MB8 LINE L1 -13 6165 5885 * 885 241 5 5 chr2 107324413 107324620 -145931963 - L1M4c LINE L1 -4684 1962 1756 2422 212 32 34 chr2 107324631 107325167 -145931416 - L1M4c LINE L1 -5041 1501 965 1977 120 7 3 chr2 107325167 107325459 -145931124 - AluSq SINE Alu -20 293 1 2422 212 32 34 chr2 107325459 107325635 -145930948 - L1M4c LINE L1 -5577 965 790 1085 132 0 6 chr2 107325713 107325872 -145930711 - AluSx SINE Alu -150 162 5 520 232 21 35 chr2 107326348 107326490 -145930093 - MLT1H LTR MaLR -391 158 19 509 300 50 29 chr2 107330626 107330866 -145925717 - MARNA DNA Mariner -126 460 216 336 24 0 0 chr2 107331661 107331702 -145924881 + (CA)n Simple_repeat Simple_repeat 2 42 0 21 82 0 0 chr2 107331869 107331918 -145924665 + AT_rich Low_complexity Low_complexity 1 49 0 2091 127 40 20 chr2 107332029 107332383 -145924200 + MER46B DNA MER2_type 1 236 0 21 57 0 0 chr2 107332514 107332549 -145924034 + AT_rich Low_complexity Low_complexity 1 35 0 30 0 0 0 chr2 107332827 107332857 -145923726 + AT_rich Low_complexity Low_complexity 1 30 0 26 82 0 0 chr2 107333024 107333085 -145923498 + AT_rich Low_complexity Low_complexity 1 61 0 2741 10 0 0 chr2 107333128 107333429 -145923154 - AluYa5 SINE Alu -9 302 2 6469 132 12 7 chr2 107333447 107334522 -145922061 + L1MA3 LINE L1 5209 6289 -16 183 100 0 0 chr2 107334522 107334552 -145922031 + (CATATA)n Simple_repeat Simple_repeat 2 31 0 2005 93 0 18 chr2 107334580 107334858 -145921725 + AluSc SINE Alu 1 273 -36 193 0 94 0 chr2 107334866 107334898 -145921685 + A-rich Low_complexity Low_complexity 1 35 0 186 354 83 0 chr2 107338796 107338940 -145917643 - MIR SINE MIR -70 192 37 206 259 35 35 chr2 107339498 107339583 -145917000 - L2 LINE L2 0 3313 3229 22 35 0 0 chr2 107344442 107344471 -145912112 + AT_rich Low_complexity Low_complexity 1 29 0 243 0 0 0 chr2 107344952 107344979 -145911604 + (A)n Simple_repeat Simple_repeat 1 27 0 24 85 0 0 chr2 107345567 107345626 -145910957 + AT_rich Low_complexity Low_complexity 1 59 0 957 186 5 5 chr2 107347046 107347240 -145909343 + L1MB3 LINE L1 5987 6180 -3 1688 153 33 13 chr2 107347257 107347733 -145908850 + AluSx SINE Alu 5 486 0 441 54 0 0 chr2 107347749 107347805 -145908778 + (GGAA)n Simple_repeat Simple_repeat 3 58 0 1452 142 145 13 chr2 107348413 107348716 -145907867 + MER61A LTR ERV1 1 343 0 29 28 0 0 chr2 107349411 107349447 -145907136 + AT_rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chr2 107349726 107349756 -145906827 + AT_rich Low_complexity Low_complexity 1 30 0 294 299 52 78 chr2 107352247 107352370 -145904213 - MLT1L LTR MaLR -8 607 482 2054 128 42 31 chr2 107352370 107352730 -145903853 - THE1B LTR MaLR 0 364 1 294 299 52 78 chr2 107352730 107353028 -145903555 - MLT1L LTR MaLR -133 482 197 2192 84 0 23 chr2 107353189 107353498 -145903085 - AluY SINE Alu -9 302 1 1904 176 70 28 chr2 107353532 107354046 -145902537 + MLT2A2 LTR ERVL 1 554 0 270 309 97 24 chr2 107355160 107355325 -145901258 - MIR SINE MIR -75 187 11 1953 204 79 30 chr2 107357548 107358081 -145898502 + MER89 LTR ERV1 1 559 0 275 247 143 78 chr2 107358111 107358265 -145898318 - MIR3 SINE MIR -40 168 5 180 319 32 51 chr2 107358511 107358668 -145897915 + MIR SINE MIR 59 212 -50 2510 67 0 10 chr2 107359573 107359887 -145896696 + AluY SINE Alu 1 311 0 1904 151 3 10 chr2 107361859 107362157 -145894426 - AluJb SINE Alu -16 296 1 240 325 98 95 chr2 107362638 107363047 -145893536 - L2 LINE L2 -1 3271 2862 469 318 90 9 chr2 107363470 107363703 -145892880 + MER46C DNA MER2_type 65 316 -22 522 274 154 16 chr2 107365752 107365970 -145890613 - MIR SINE MIR -3 259 17 467 315 38 25 chr2 107366830 107367068 -145889515 - L2 LINE L2 -177 3136 2896 1906 188 84 19 chr2 107367069 107367519 -145889064 + MLT1D LTR MaLR 1 485 -20 2232 124 48 22 chr2 107367519 107367874 -145888709 + THE1B LTR MaLR 1 364 0 1906 188 84 19 chr2 107367874 107367897 -145888686 + MLT1D LTR MaLR 485 505 0 6478 23 5 3 chr2 107370284 107371075 -145885508 + L1PA3 LINE L1 5384 6155 0 216 217 14 58 chr2 107371294 107371363 -145885220 + MIR SINE MIR 24 89 -119 522 153 12 0 chr2 107371667 107371752 -145884831 + AluSg/x SINE Alu 205 290 -19 1856 102 11 22 chr2 107372113 107372387 -145884196 + AluY SINE Alu 23 293 -18 273 308 120 38 chr2 107373491 107373624 -145882959 - MIR SINE MIR -98 164 21 218 309 79 32 chr2 107374423 107374549 -145882034 - L2 LINE L2 -1 3271 3140 213 39 0 0 chr2 107376189 107376215 -145880368 + (TG)n Simple_repeat Simple_repeat 2 27 0 270 81 0 0 chr2 107376215 107376237 -145880346 + (CA)n Simple_repeat Simple_repeat 1 59 0 270 81 0 0 chr2 107376237 107376274 -145880309 + (CA)n Simple_repeat Simple_repeat 2 38 0 258 180 0 0 chr2 107376309 107376370 -145880213 + (TA)n Simple_repeat Simple_repeat 1 61 0 339 261 0 22 chr2 107376396 107376488 -145880095 - L1MC4 LINE L1 -1339 6703 6614 1654 242 27 6 chr2 107376489 107376965 -145879618 - L1M4 LINE L1 -1019 5127 4642 2334 211 15 20 chr2 107377200 107377739 -145878844 - MLT1A1-int LTR MaLR -973 762 227 266 236 0 14 chr2 107377846 107377918 -145878665 + L1ME LINE L1 5797 5867 -297 7655 205 8 15 chr2 107377931 107379956 -145876627 + L1P5 LINE L1 3431 5437 -714 368 333 56 20 chr2 107380568 107380766 -145875817 - MIR SINE MIR 0 262 58 728 246 16 16 chr2 107380820 107381003 -145875580 - MER5A DNA MER1_type -3 186 4 202 129 0 0 chr2 107382262 107382293 -145874290 + MIR SINE MIR 207 237 -25 233 125 0 42 chr2 107382609 107382657 -145873926 + (GGGAA)n Simple_repeat Simple_repeat 5 50 0 243 0 0 0 chr2 107383724 107383751 -145872832 + (TC)n Simple_repeat Simple_repeat 1 27 0 246 170 19 19 chr2 107385212 107385265 -145871318 + (TG)n Simple_repeat Simple_repeat 2 54 0 605 296 122 4 chr2 107389112 107389342 -145867241 - MIR SINE MIR 0 262 6 28 29 0 0 chr2 107389563 107389598 -145866985 + AT_rich Low_complexity Low_complexity 1 35 0 511 231 62 87 chr2 107394419 107394614 -145861969 - MIR SINE MIR -71 191 2 389 309 40 72 chr2 107398809 107399032 -145857551 + MIR SINE MIR 47 262 0 216 163 0 0 chr2 107399748 107399791 -145856792 + A-rich Low_complexity Low_complexity 1 43 0 189 0 0 0 chr2 107400542 107400563 -145856020 + (TC)n Simple_repeat Simple_repeat 2 22 0 585 332 4 18 chr2 107400941 107401080 -145855503 - MIR SINE MIR -27 235 99 2061 174 8 3 chr2 107401080 107401443 -145855140 - MLT1A1 LTR MaLR 0 365 1 585 332 4 18 chr2 107401443 107401529 -145855054 - MIR SINE MIR -163 99 13 30 89 0 0 chr2 107402192 107402271 -145854312 + AT_rich Low_complexity Low_complexity 1 79 0 867 257 50 44 chr2 107402930 107403545 -145853038 + L1MDa LINE L1 2190 2815 -3725 213 115 94 0 chr2 107403553 107403649 -145852934 + (TA)n Simple_repeat Simple_repeat 2 106 0 3309 226 37 109 chr2 107403765 107405124 -145851459 + L1M4 LINE L1 3560 4740 -1406 1404 214 28 62 chr2 107405124 107405166 -145851417 + MLT1A2 LTR MaLR 1 43 -331 2234 112 3 0 chr2 107405166 107405460 -145851123 + AluSx SINE Alu 1 295 -17 1404 214 28 62 chr2 107405460 107405804 -145850779 + MLT1A2 LTR MaLR 43 374 0 3309 226 37 109 chr2 107405804 107406384 -145850199 + L1M4 LINE L1 4740 5360 -786 9789 118 9 4 chr2 107406411 107407879 -145848704 + THE1A-int LTR MaLR 106 1580 0 2356 111 8 0 chr2 107407879 107408231 -145848352 + THE1A LTR MaLR 1 355 0 4615 140 4 0 chr2 107408231 107408983 -145847600 + L1PA15 LINE L1 5404 6158 -7 519 305 28 16 chr2 107408977 107409295 -145847288 + L1MD1 LINE L1 4944 5265 -881 * 17439 192 31 8 chr2 107409319 107411960 -145844623 + L1PA13 LINE L1 1 2579 -4235 1775 173 3 3 chr2 107411960 107412276 -145844307 + AluJb SINE Alu 1 316 0 17439 192 31 8 chr2 107412276 107416250 -145840333 + L1PA13 LINE L1 2579 6779 -35 3984 182 57 18 chr2 107416266 107417218 -145839365 + L1MD1 LINE L1 5254 6242 0 602 296 82 31 chr2 107417224 107417515 -145839068 - L2 LINE L2 -529 2785 2480 205 291 18 0 chr2 107417628 107417683 -145838900 + L2 LINE L2 2965 3020 -252 628 298 29 11 chr2 107418014 107418223 -145838360 - MIR SINE MIR -2 260 50 354 247 0 41 chr2 107418959 107419056 -145837527 + L1MC4 LINE L1 6613 6705 -1337 246 32 0 0 chr2 107419101 107419132 -145837451 + (CA)n Simple_repeat Simple_repeat 1 31 0 821 177 24 6 chr2 107420221 107420404 -145836179 - MER39B LTR ERV1 0 622 451 39979 59 3 1 chr2 107420442 107426571 -145830012 + L1PA4 LINE L1 11 6152 -3 21 36 0 0 chr2 107427007 107427035 -145829548 + AT_rich Low_complexity Low_complexity 1 28 0 225 65 0 0 chr2 107427442 107427473 -145829110 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 30 0 0 0 chr2 107428273 107428303 -145828280 + AT_rich Low_complexity Low_complexity 1 30 0 748 284 31 18 chr2 107428606 107428835 -145827748 + MIR SINE MIR 6 237 -25 558 324 24 19 chr2 107429271 107429478 -145827105 - MIR SINE MIR -26 236 29 197 178 22 0 chr2 107430832 107430877 -145825706 + CT-rich Low_complexity Low_complexity 2 47 0 289 268 141 7 chr2 107431139 107431281 -145825302 - MARNA DNA Mariner -187 399 239 193 338 50 43 chr2 107431524 107431663 -145824920 + L2 LINE L2 3133 3272 0 246 372 97 13 chr2 107432151 107432240 -145824343 + MIR SINE MIR 2 82 -180 188 35 35 0 chr2 107432240 107432269 -145824314 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 246 372 97 13 chr2 107432269 107432405 -145824178 + MIR SINE MIR 82 246 -16 836 242 52 30 chr2 107432954 107433139 -145823444 + MIR SINE MIR 19 211 -51 749 260 77 0 chr2 107433139 107433347 -145823236 + MER58A DNA MER1_type 1 224 0 836 242 52 30 chr2 107433347 107433392 -145823191 + MIR SINE MIR 211 254 -8 551 302 95 9 chr2 107433634 107433866 -145822717 + L2 LINE L2 2185 2436 -878 2218 106 3 0 chr2 107433987 107434280 -145822303 - AluSq SINE Alu -19 294 1 477 34 0 0 chr2 107434374 107434433 -145822150 + (CA)n Simple_repeat Simple_repeat 2 60 0 434 108 12 48 chr2 107434862 107434888 -145821695 - MADE1 DNA Mariner 0 80 55 2406 88 0 0 chr2 107434888 107435194 -145821389 - AluY SINE Alu -5 306 1 434 108 12 48 chr2 107435194 107435250 -145821333 - MADE1 DNA Mariner -25 55 1 2152 118 0 0 chr2 107435405 107435736 -145820847 - L1PA8 LINE L1 -2052 4094 3764 7940 129 14 7 chr2 107435736 107437803 -145818780 + L1PA8 LINE L1 4087 6165 -7 348 374 41 0 chr2 107437913 107438060 -145818523 - MIR SINE MIR -53 209 57 1588 224 39 10 chr2 107439368 107439783 -145816800 + MER90 LTR ERV1 4 430 -145 1552 75 5 0 chr2 107439799 107440013 -145816570 - L1PA13 LINE L1 -20 6143 5929 603 198 0 45 chr2 107440013 107440170 -145816413 + L1P LINE L1 4464 4613 -1533 356 220 106 30 chr2 107440172 107440304 -145816279 + MER90 LTR ERV1 473 614 0 186 347 113 8 chr2 107440433 107440557 -145816026 - MIR SINE MIR -91 171 35 2127 124 26 59 chr2 107442448 107442836 -145813747 + THE1C LTR MaLR 1 375 0 2028 133 0 43 chr2 107443607 107443930 -145812653 + AluSx SINE Alu 1 309 -3 373 271 15 45 chr2 107446491 107446624 -145809959 + L2 LINE L2 3185 3313 0 1622 212 8 57 chr2 107447575 107448051 -145808532 + L1MA9 LINE L1 5823 6275 -37 24 91 0 0 chr2 107451971 107452037 -145804546 + AT_rich Low_complexity Low_complexity 1 66 0 313 253 193 24 chr2 107453056 107453222 -145803361 + MIR3 SINE MIR 9 202 -6 183 279 162 97 chr2 107453593 107453747 -145802836 - MIR3 SINE MIR -35 173 10 989 113 0 0 chr2 107454528 107454661 -145801922 + AluJb SINE Alu 1 133 -179 360 59 0 0 chr2 107454885 107454936 -145801647 + (CA)n Simple_repeat Simple_repeat 1 51 0 1629 224 54 12 chr2 107455958 107456465 -145800118 - MLT1E3 LTR MaLR 0 624 35 272 328 105 56 chr2 107456626 107457035 -145799548 + L2 LINE L2 2176 2604 -710 1085 104 0 0 chr2 107457928 107458082 -145798501 + L1PA8 LINE L1 3982 4135 -2011 6205 112 2 3 chr2 107458075 107459467 -145797116 + L1PA8 LINE L1 4773 6163 -9 270 312 9 55 chr2 107459483 107459592 -145796991 + L2 LINE L2 3197 3300 -13 221 200 0 0 chr2 107459754 107459794 -145796789 - MIR SINE MIR -112 150 111 222 37 0 0 chr2 107461530 107461557 -145795026 + (GA)n Simple_repeat Simple_repeat 2 28 0 184 184 26 0 chr2 107462790 107462828 -145793755 + MER5A DNA MER1_type 149 187 -2 231 304 116 0 chr2 107463961 107464073 -145792510 + MER103 DNA DNA 40 164 -2 242 106 21 0 chr2 107466092 107466139 -145790444 + (CAAAA)n Simple_repeat Simple_repeat 3 50 0 982 307 57 28 chr2 107466714 107467621 -145788962 - L1ME3 LINE L1 -300 5845 4920 1726 269 45 13 chr2 107467628 107468097 -145788486 - LTR40a LTR ERVL -32 487 4 338 300 82 66 chr2 107468194 107469166 -145787417 - L1ME3 LINE L1 -3024 3105 2118 263 209 23 23 chr2 107469166 107469252 -145787331 + T-rich Low_complexity Low_complexity 2 87 0 273 221 19 114 chr2 107469360 107469518 -145787065 + HERV16 LTR ERVL 4574 4716 -280 550 310 83 39 chr2 107469842 107470252 -145786331 + LTR16B LTR ERVL 35 462 -2 1186 290 90 9 chr2 107470269 107470724 -145785859 - MER119 DNA MER1_type -62 521 30 24 0 0 0 chr2 107470787 107470811 -145785772 + AT_rich Low_complexity Low_complexity 1 24 0 3510 156 28 11 chr2 107470812 107471461 -145785122 - L1MC1 LINE L1 -2 6331 5672 288 325 147 0 chr2 107471521 107471684 -145784899 - L1ME3 LINE L1 -5491 628 442 183 80 0 0 chr2 107471975 107472000 -145784583 + (TG)n Simple_repeat Simple_repeat 2 26 0 237 128 0 0 chr2 107472045 107472092 -145784491 + (T)n Simple_repeat Simple_repeat 1 47 0 199 316 31 88 chr2 107472344 107472537 -145784046 + L2 LINE L2 2077 2258 -1056 33 43 0 0 chr2 107473656 107473703 -145782880 + AT_rich Low_complexity Low_complexity 1 47 0 208 328 0 0 chr2 107475008 107475066 -145781517 + MIR SINE MIR 91 148 -114 213 65 0 0 chr2 107475160 107475191 -145781392 + (TG)n Simple_repeat Simple_repeat 1 31 0 339 85 0 0 chr2 107475191 107475238 -145781345 + (GA)n Simple_repeat Simple_repeat 2 48 0 229 321 48 0 chr2 107475575 107475659 -145780924 - MIR SINE MIR -61 147 60 1154 196 78 60 chr2 107476244 107476627 -145779956 - MLT1B LTR MaLR 0 390 1 2824 48 3 6 chr2 107477084 107477437 -145779146 + L1PA7 LINE L1 5751 6102 -52 847 303 93 16 chr2 107477457 107477909 -145778674 + L1MEd LINE L1 78 564 -5555 260 186 41 41 chr2 107477922 107478019 -145778564 + L1MEd LINE L1 742 838 -5281 * 465 199 4 0 chr2 107478006 107478103 -145778480 - L1M4 LINE L1 -567 5607 5508 21 0 0 0 chr2 107478721 107478742 -145777841 + AT_rich Low_complexity Low_complexity 1 21 0 1689 150 0 4 chr2 107478794 107479040 -145777543 + AluSx SINE Alu 39 283 -29 333 185 0 0 chr2 107479040 107479105 -145777478 + (TA)n Simple_repeat Simple_repeat 2 66 0 573 281 168 37 chr2 107479170 107479230 -145777353 - MLT1I LTR MaLR -3 406 355 558 0 0 0 chr2 107479230 107479292 -145777291 + (GAAA)n Simple_repeat Simple_repeat 2 63 0 573 281 168 37 chr2 107479292 107479583 -145777000 - MLT1I LTR MaLR -54 355 9 2467 64 0 43 chr2 107479682 107479983 -145776600 - L1P3 LINE L1 -376 5778 5492 2179 98 13 35 chr2 107479983 107480298 -145776285 - AluSc SINE Alu -1 308 1 2467 64 0 43 chr2 107480298 107480342 -145776241 - L1P3 LINE L1 -662 5492 5448 200 200 0 0 chr2 107480488 107480523 -145776060 + (CAT)n Simple_repeat Simple_repeat 2 36 0 28 29 0 0 chr2 107480649 107480684 -145775899 + AT_rich Low_complexity Low_complexity 1 35 0 690 292 20 20 chr2 107484195 107484397 -145772186 - MIR SINE MIR -38 224 23 1337 174 135 75 chr2 107487420 107487858 -145768725 + MLT1C LTR MaLR 1 464 -3 203 315 27 14 chr2 107488001 107488074 -145768509 - L2 LINE L2 -202 3070 2997 1355 156 0 0 chr2 107488075 107488287 -145768296 + AluSx SINE Alu 1 212 -100 469 91 0 0 chr2 107488287 107488353 -145768230 + AluSq/x SINE Alu 78 143 -169 1250 219 25 6 chr2 107488454 107488779 -145767804 - L1P4 LINE L1 -344 5821 5491 314 369 11 6 chr2 107488802 107488981 -145767602 + CT-rich Low_complexity Low_complexity 1 180 0 186 209 0 0 chr2 107489001 107489044 -145767539 + CT-rich Low_complexity Low_complexity 3 45 0 396 282 3 59 chr2 107489072 107489329 -145767254 + CT-rich Low_complexity Low_complexity 1 242 0 700 138 0 0 chr2 107489512 107489621 -145766962 + AluSp/q SINE Alu 189 297 -16 208 259 19 0 chr2 107490195 107490249 -145766334 + MIR SINE MIR 206 260 -2 2250 91 0 44 chr2 107490375 107490693 -145765890 + AluY SINE Alu 1 304 -7 232 288 174 63 chr2 107491126 107491616 -145764967 + L2 LINE L2 1479 2022 -1292 313 329 35 54 chr2 107491809 107492122 -145764461 + L2 LINE L2 2111 2417 -897 195 314 54 32 chr2 107492340 107492525 -145764058 + L2 LINE L2 3123 3311 -2 383 271 41 29 chr2 107493174 107493344 -145763239 - HAL1 LINE L1 -38 2469 2298 24 32 0 0 chr2 107493449 107493480 -145763103 + AT_rich Low_complexity Low_complexity 1 31 0 490 305 74 55 chr2 107493677 107494518 -145762065 - L1MEd LINE L1 -4331 1979 1095 351 44 0 0 chr2 107494518 107494563 -145762020 + (CA)n Simple_repeat Simple_repeat 2 46 0 490 305 74 55 chr2 107494563 107494691 -145761892 - L1MEd LINE L1 -5215 1095 971 210 91 0 0 chr2 107494863 107494896 -145761687 + (T)n Simple_repeat Simple_repeat 1 33 0 324 417 56 14 chr2 107495145 107495289 -145761294 - MER91A DNA MER1_type -22 174 25 1386 99 9 19 chr2 107496045 107496256 -145760327 - AluY SINE Alu -2 309 101 305 241 11 11 chr2 107496735 107496822 -145759761 - L1MC/D LINE L1 -1986 5822 5736 362 251 40 111 chr2 107497226 107497425 -145759158 - LTR68 LTR ERV1 -292 448 264 444 198 0 0 chr2 107497728 107497809 -145758774 + MLT1D LTR MaLR 250 330 -175 1939 144 171 32 chr2 107497831 107498241 -145758342 + LTR24 LTR ERV1 1 467 0 1051 236 18 4 chr2 107498264 107498493 -145758090 + L1ME1 LINE L1 581 812 -5730 * 4025 260 62 33 chr2 107498492 107499740 -145756843 + L1ME1 LINE L1 3823 5034 -1630 2378 68 0 10 chr2 107499740 107500034 -145756549 - AluY SINE Alu -6 305 15 4025 260 62 33 chr2 107500034 107501447 -145755136 + L1ME1 LINE L1 5034 6574 -90 1012 215 12 27 chr2 107501513 107501769 -145754814 + L1MD3 LINE L1 7734 7985 -10 2325 112 0 0 chr2 107502454 107502766 -145753817 + AluSx SINE Alu 1 312 0 1208 248 147 2 chr2 107503113 107503520 -145753063 + LTR41 LTR ERVL 1 466 -307 1906 132 14 3 chr2 107503622 107503910 -145752673 + AluSx SINE Alu 5 295 -17 230 355 37 0 chr2 107503922 107504029 -145752554 - MER94 DNA DNA 0 134 24 212 0 36 0 chr2 107504134 107504162 -145752421 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2222 126 0 0 chr2 107504623 107504933 -145751650 + AluSx SINE Alu 1 310 -2 635 75 11 0 chr2 107510616 107510710 -145745873 + (TAGA)n Simple_repeat Simple_repeat 2 96 0 1051 182 31 49 chr2 107513405 107513630 -145742953 - MER106A DNA MER1_type -15 221 1 22 0 0 0 chr2 107516948 107516970 -145739613 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 107517487 107517515 -145739068 + AT_rich Low_complexity Low_complexity 1 28 0 317 24 24 0 chr2 107517746 107517788 -145738795 + (CA)n Simple_repeat Simple_repeat 1 43 0 290 304 40 24 chr2 107518913 107519038 -145737545 + L2 LINE L2 3182 3308 -5 7937 97 8 3 chr2 107521050 107523036 -145733547 - L1PA7 LINE L1 -3 6151 4204 1298 126 0 5 chr2 107523036 107523227 -145733356 + L1PA7 LINE L1 4025 4214 -1932 1997 144 3 6 chr2 107523539 107523852 -145732731 - AluSx SINE Alu 0 312 1 231 88 0 0 chr2 107524310 107524344 -145732239 + (T)n Simple_repeat Simple_repeat 1 34 0 243 191 21 0 chr2 107527226 107527273 -145729310 + MER116 DNA Mariner 1 48 -32 2024 120 33 0 chr2 107527477 107527778 -145728805 - AluSq SINE Alu -2 311 1 1553 186 96 44 chr2 107528135 107528614 -145727969 - MLT1D LTR MaLR 0 505 2 451 300 81 24 chr2 107528657 107528904 -145727679 + L2 LINE L2 3001 3261 -52 221 156 67 0 chr2 107529082 107529127 -145727456 - L2 LINE L2 -5 3308 3261 2424 57 0 0 chr2 107530593 107530890 -145725693 + AluY SINE Alu 1 297 -14 23 0 0 0 chr2 107531281 107531304 -145725279 + AT_rich Low_complexity Low_complexity 1 23 0 4928 75 37 0 chr2 107531599 107532275 -145724308 - L1PA8 LINE L1 -4 6168 5468 691 309 27 36 chr2 107532298 107532599 -145723984 - L1ME1 LINE L1 -6 6160 5863 34 0 0 0 chr2 107532611 107532645 -145723938 + AT_rich Low_complexity Low_complexity 1 34 0 28 61 0 0 chr2 107533050 107533099 -145723484 + AT_rich Low_complexity Low_complexity 1 49 0 5241 201 63 11 chr2 107533593 107534867 -145721716 - L1MC2 LINE L1 -16 6608 5244 1771 241 131 16 chr2 107534924 107535319 -145721264 - L1MC2 LINE L1 -1447 4979 4631 198 91 0 0 chr2 107535319 107535352 -145721231 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 1580 128 0 0 chr2 107535355 107535573 -145721010 - AluSg/x SINE Alu -30 282 65 1771 241 131 16 chr2 107535573 107535815 -145720768 - L1MC2 LINE L1 -1796 4630 4264 * 3711 218 57 32 chr2 107535812 107536947 -145719636 - L1MC2 LINE L1 -2937 3489 2383 213 39 0 0 chr2 107536947 107536973 -145719610 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 3711 218 57 32 chr2 107536973 107537526 -145719057 - L1MC2 LINE L1 -4043 2383 1754 834 185 27 0 chr2 107537526 107537672 -145718911 - FRAM SINE Alu -14 152 3 3711 218 57 32 chr2 107537672 107537740 -145718843 - L1MC2 LINE L1 -4672 1754 1689 1823 157 42 3 chr2 107537747 107538062 -145718521 - L1PA15 LINE L1 -24 6141 5820 441 207 23 0 chr2 107538066 107538153 -145718430 - FRAM SINE Alu -24 152 64 319 55 0 109 chr2 107538153 107538208 -145718375 - L1P4 LINE L1 -324 5839 5791 2838 184 10 17 chr2 107538311 107539051 -145717532 - L1PA15 LINE L1 -696 5469 4737 1435 259 90 53 chr2 107539052 107539110 -145717473 - L1MC2 LINE L1 -5737 689 635 1352 205 92 12 chr2 107539110 107539456 -145717127 + MLT1A2 LTR MaLR 1 374 0 1435 259 90 53 chr2 107539456 107539897 -145716686 - L1MC2 LINE L1 -5791 635 158 273 29 0 0 chr2 107539897 107539931 -145716652 + (TC)n Simple_repeat Simple_repeat 1 34 0 1435 259 90 53 chr2 107539931 107540076 -145716507 - L1MC2 LINE L1 -6268 158 20 207 317 22 115 chr2 107541545 107541728 -145714855 + MIR3 SINE MIR 40 205 -3 14228 143 31 4 chr2 107542157 107544511 -145712072 + Tigger1 DNA MER2_type 3 2418 0 207 169 26 39 chr2 107545681 107545758 -145710825 + (TA)n Simple_repeat Simple_repeat 1 76 0 554 267 19 12 chr2 107546944 107547105 -145709478 - MIR SINE MIR -1 261 100 2310 175 84 22 chr2 107548856 107548885 -145707698 - L1MC3 LINE L1 -9 7776 7750 2082 121 3 0 chr2 107548885 107549182 -145707401 - AluSc SINE Alu -11 298 1 2310 175 84 22 chr2 107549182 107549700 -145706883 - L1MC3 LINE L1 -35 7750 7195 270 307 34 0 chr2 107549704 107549792 -145706791 - MLT1F1 LTR MaLR -442 125 35 531 171 0 0 chr2 107549834 107549939 -145706644 - L1MC3 LINE L1 -748 7037 6933 * 3947 257 51 55 chr2 107549915 107550843 -145705740 - L1MCb LINE L1 -1864 4700 3770 1030 115 6 0 chr2 107550843 107550857 -145705726 - L1PA10 LINE L1 -5 6163 6151 225 0 0 0 chr2 107550857 107550882 -145705701 + (TTTAA)n Simple_repeat Simple_repeat 1 25 0 1030 115 6 0 chr2 107550882 107551023 -145705560 - L1PA10 LINE L1 -17 6151 6007 3947 257 51 55 chr2 107551023 107551253 -145705330 - L1MCb LINE L1 -2794 3770 3541 225 0 0 0 chr2 107551253 107551278 -145705305 + (TTTTA)n Simple_repeat Simple_repeat 5 29 0 3947 257 51 55 chr2 107551278 107551473 -145705110 - L1MCb LINE L1 -3023 3541 3347 1729 149 0 33 chr2 107551473 107551774 -145704809 + AluSx SINE Alu 1 291 -21 3947 257 51 55 chr2 107551774 107552268 -145704315 - L1MCb LINE L1 -3217 3347 2858 330 182 78 0 chr2 107552264 107552341 -145704242 + L1M4 LINE L1 2513 2595 -3551 * 309 274 18 18 chr2 107552351 107552464 -145704119 - L1MCb LINE L1 -3700 2864 2752 1750 295 48 15 chr2 107552485 107553157 -145703426 - L1MCb LINE L1 -5297 748 55 28 29 0 0 chr2 107553364 107553399 -145703184 + AT_rich Low_complexity Low_complexity 1 35 0 305 61 20 20 chr2 107553785 107553834 -145702749 - L1PA3 LINE L1 -3 6152 6104 396 20 0 0 chr2 107553834 107553864 -145702719 + L1PA3 LINE L1 6104 6152 -3 284 182 0 0 chr2 107554979 107555034 -145701549 + L1PA16 LINE L1 6107 6161 -5 2277 150 37 3 chr2 107555103 107555477 -145701106 - LTR9B LTR ERV1 0 644 258 5710 156 8 46 chr2 107557278 107559079 -145697504 + L1MA4 LINE L1 4559 6291 -9 294 29 0 0 chr2 107559320 107559355 -145697228 + (CA)n Simple_repeat Simple_repeat 1 35 0 253 246 0 0 chr2 107560720 107560777 -145695806 + MER116 DNA Mariner 4 60 -20 1421 239 93 10 chr2 107560853 107560904 -145695679 - MLT2B1 LTR ERVL -2 518 473 627 51 0 0 chr2 107560904 107560983 -145695600 + (TCTA)n Simple_repeat Simple_repeat 2 80 0 1421 239 93 10 chr2 107560983 107561316 -145695267 - MLT2B1 LTR ERVL -47 473 102 1553 250 22 10 chr2 107562079 107562487 -145694096 - L1MC3 LINE L1 -1102 6683 6271 2374 68 3 7 chr2 107562488 107562798 -145693785 + AluY SINE Alu 1 309 -2 1790 227 56 47 chr2 107562803 107563468 -145693115 - L1MCb LINE L1 -1644 4920 4250 1622 145 0 0 chr2 107563468 107563702 -145692881 - AluSx SINE Alu -75 237 4 2471 246 77 67 chr2 107563712 107563889 -145692694 - L1MCb LINE L1 -2501 4063 3889 2240 103 0 10 chr2 107563889 107564191 -145692392 - AluSg SINE Alu -9 301 3 2471 246 77 67 chr2 107564191 107565221 -145691362 - L1MCb LINE L1 -2675 3889 2871 881 226 50 5 chr2 107565221 107565420 -145691163 + MER6B DNA MER2_type 3 210 0 2471 246 77 67 chr2 107565420 107566706 -145689877 - L1MCb LINE L1 -3693 2871 1399 1283 232 97 51 chr2 107566708 107567428 -145689155 - L1MCb LINE L1 -4851 1194 564 880 297 49 76 chr2 107567547 107568136 -145688447 - L1MCb LINE L1 -5469 576 4 33 25 0 0 chr2 107568243 107568283 -145688300 + AT_rich Low_complexity Low_complexity 1 40 0 228 170 94 0 chr2 107568629 107568682 -145687901 + MER103 DNA DNA 11 68 -98 321 266 101 44 chr2 107568896 107569054 -145687529 - MIR SINE MIR -58 204 38 664 229 243 0 chr2 107569633 107569851 -145686732 - L1MD2 LINE L1 -13 6346 6076 534 197 36 62 chr2 107572171 107572364 -145684219 + MER53 DNA DNA 1 188 -1 1428 262 93 31 chr2 107574200 107574685 -145681898 - MLT1F LTR MaLR -3 539 25 23 0 0 0 chr2 107574976 107574999 -145681584 + AT_rich Low_complexity Low_complexity 1 23 0 1032 96 0 0 chr2 107574999 107575176 -145681407 + (TA)n Simple_repeat Simple_repeat 2 178 0 1861 53 19 1 chr2 107575542 107575842 -145680741 - L1PA7 LINE L1 -731 5441 5139 5302 71 21 0 chr2 107575842 107576532 -145680051 + L1PA7 LINE L1 5436 6153 -1 1715 131 0 34 chr2 107576653 107576920 -145679663 + AluSp SINE Alu 18 275 -38 27 0 0 0 chr2 107578691 107578718 -145677865 + AT_rich Low_complexity Low_complexity 1 27 0 1889 188 11 8 chr2 107579043 107579405 -145677178 + MLT1A1 LTR MaLR 1 363 -2 2571 51 0 3 chr2 107581082 107581394 -145675189 - AluY SINE Alu 0 311 1 1287 70 29 0 chr2 107581725 107581896 -145674687 - AluY SINE Alu -3 308 133 288 0 0 0 chr2 107582666 107582698 -145673885 + (TG)n Simple_repeat Simple_repeat 2 33 0 212 288 0 0 chr2 107583555 107583621 -145672962 + A-rich Low_complexity Low_complexity 2 67 0 2208 93 199 5 chr2 107585476 107585853 -145670730 + LTR7 LTR ERV1 1 450 0 194 79 0 26 chr2 107586285 107586323 -145670260 + (TAAAA)n Simple_repeat Simple_repeat 4 40 0 1756 157 0 17 chr2 107587349 107587636 -145668947 + AluSx SINE Alu 28 309 -3 538 191 8 69 chr2 107587636 107587767 -145668816 + FLAM_A SINE Alu 1 123 -10 716 281 25 5 chr2 107588694 107588893 -145667690 + MIR SINE MIR 41 243 -19 193 167 0 0 chr2 107589048 107589078 -145667505 + L2 LINE L2 3264 3293 -20 190 294 0 0 chr2 107589348 107589399 -145667184 + MIR3 SINE MIR 157 207 -1 22 35 0 0 chr2 107589599 107589628 -145666955 + AT_rich Low_complexity Low_complexity 1 29 0 320 274 133 0 chr2 107590577 107590690 -145665893 - MIR SINE MIR -38 224 97 2151 121 0 0 chr2 107591913 107592210 -145664373 - AluSx SINE Alu -9 303 7 1544 172 69 40 chr2 107593841 107594219 -145662364 + MLT1B LTR MaLR 1 389 -1 369 0 0 0 chr2 107594334 107594375 -145662208 + (CA)n Simple_repeat Simple_repeat 1 41 0 240 86 0 0 chr2 107595345 107595380 -145661203 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1415 194 36 12 chr2 107596761 107597096 -145659487 - L1MB7 LINE L1 0 6184 5842 10543 169 14 11 chr2 107597097 107598248 -145658335 + L1PB1 LINE L1 3008 4154 -1997 2074 151 0 0 chr2 107598248 107598560 -145658023 + AluSq SINE Alu 1 312 -1 10543 169 14 11 chr2 107598560 107599328 -145657255 + L1PB1 LINE L1 4154 4918 -1233 1808 168 7 3 chr2 107599328 107599626 -145656957 + AluSx SINE Alu 1 299 -13 10543 169 14 11 chr2 107599626 107600837 -145655746 + L1PB1 LINE L1 4918 6149 -2 1712 186 40 75 chr2 107600836 107601491 -145655092 - L1MD2 LINE L1 -492 5692 5266 * 1216 252 69 62 chr2 107601814 107602333 -145654250 - MLT1E2 LTR MaLR 0 626 104 408 328 99 0 chr2 107602396 107602567 -145654016 - MLT1-int LTR MaLR -487 884 697 1774 161 0 7 chr2 107602718 107603053 -145653530 + AluJo SINE Alu 1 333 0 1266 256 24 35 chr2 107603062 107603487 -145653096 - MLT1-int LTR MaLR -760 611 192 1362 220 118 24 chr2 107603521 107604002 -145652581 - MER39 LTR ERV1 0 707 5 301 238 48 9 chr2 107604106 107604211 -145652372 - MER117 DNA MER1_type -32 165 57 1367 258 102 70 chr2 107604454 107604797 -145651786 - HAL1b LINE L1 -21 1327 996 770 244 12 6 chr2 107604797 107604969 -145651614 - FAM SINE Alu -2 173 1 1367 258 102 70 chr2 107604969 107605841 -145650742 - HAL1b LINE L1 -352 996 73 2196 228 34 95 chr2 107605969 107606585 -145649998 - L1ME1 LINE L1 0 6166 5514 1015 47 31 0 chr2 107606585 107606713 -145649870 + L1PA3 LINE L1 6021 6152 -3 2196 228 34 95 chr2 107606713 107607385 -145649198 - L1ME1 LINE L1 -652 5514 4963 2170 112 7 0 chr2 107607385 107607688 -145648895 - AluY SINE Alu -6 305 1 2196 228 34 95 chr2 107607688 107607787 -145648796 - L1ME1 LINE L1 -1203 4963 4860 987 215 56 18 chr2 107607801 107608140 -145648443 - L1ME1 LINE L1 -1652 4494 4143 213 39 0 0 chr2 107608213 107608239 -145648344 + (CA)n Simple_repeat Simple_repeat 2 27 0 471 147 83 108 chr2 107608258 107608301 -145648282 + MER53 DNA DNA 37 80 -109 2179 86 14 7 chr2 107608301 107608592 -145647991 - AluSx SINE Alu -19 293 1 471 147 83 108 chr2 107608592 107608705 -145647878 + MER53 DNA DNA 80 189 0 183 215 0 0 chr2 107608959 107609024 -145647559 + CT-rich Low_complexity Low_complexity 2 66 0 647 151 6 17 chr2 107609035 107609207 -145647376 + CT-rich Low_complexity Low_complexity 1 170 0 1885 122 51 0 chr2 107609276 107609572 -145647011 - AluSq SINE Alu -2 311 1 237 65 0 0 chr2 107611687 107611718 -145644865 + (CA)n Simple_repeat Simple_repeat 2 32 0 300 294 49 71 chr2 107612334 107612518 -145644065 - MIR SINE MIR -36 226 47 240 35 0 0 chr2 107612610 107612639 -145643944 + (TAA)n Simple_repeat Simple_repeat 3 31 0 2237 125 0 0 chr2 107612811 107613123 -145643460 - AluSx SINE Alu 0 312 1 274 298 24 0 chr2 107615379 107615463 -145641120 + MIR SINE MIR 88 173 -89 1895 184 8 19 chr2 107615825 107616194 -145640389 - MLT1A1 LTR MaLR 0 365 1 573 209 17 51 chr2 107616839 107617016 -145639567 - MER104 DNA Tc2 -4 176 6 237 159 0 0 chr2 107617353 107617397 -145639186 + (TG)n Simple_repeat Simple_repeat 2 45 0 22 35 0 0 chr2 107618787 107618816 -145637767 + AT_rich Low_complexity Low_complexity 1 29 0 699 244 29 12 chr2 107620400 107620572 -145636011 - MLT1A1 LTR MaLR -190 175 1 297 350 39 0 chr2 107620782 107620885 -145635698 + HERVL LTR ERVL 1950 2056 -3598 4376 179 48 9 chr2 107621158 107622098 -145634485 - L1MB7 LINE L1 -2 6182 5188 2727 142 19 37 chr2 107622105 107622640 -145633943 - L1MA9 LINE L1 -6 6306 5782 200 217 22 0 chr2 107622640 107622686 -145633897 + (TATG)n Simple_repeat Simple_repeat 4 50 0 2537 195 44 45 chr2 107622688 107623184 -145633399 - L1MA9 LINE L1 -524 5788 5293 228 35 0 0 chr2 107623184 107623213 -145633370 + (TTTTG)n Simple_repeat Simple_repeat 1 29 0 2537 195 44 45 chr2 107623213 107623831 -145632752 - L1MA9 LINE L1 -1019 5293 4680 2678 256 56 48 chr2 107623832 107624923 -145631660 - L1M4 LINE L1 -3855 2355 1275 2074 137 0 19 chr2 107624923 107625237 -145631346 - AluSx SINE Alu -3 309 2 2678 256 56 48 chr2 107625237 107626734 -145629849 - L1M4 LINE L1 -4935 1275 2 538 309 101 47 chr2 107626803 107627230 -145629353 + HERVL LTR ERVL 2475 2924 -2840 1484 306 84 52 chr2 107627478 107628005 -145628578 + HERVL LTR ERVL 3285 3856 -1908 2160 135 120 5 chr2 107628005 107628389 -145628194 + MSTA LTR MaLR 1 428 0 1484 306 84 52 chr2 107628389 107628774 -145627809 + HERVL LTR ERVL 3856 4227 -1537 1350 205 0 26 chr2 107628824 107629092 -145627491 - AluJo SINE Alu -17 295 35 2214 175 25 68 chr2 107629156 107629461 -145627122 + MLT2C2 LTR ERVL 1 279 -185 2223 103 0 29 chr2 107629461 107629771 -145626812 - AluSx SINE Alu -11 301 1 2214 175 25 68 chr2 107629771 107629950 -145626633 + MLT2C2 LTR ERVL 279 464 0 2630 270 71 8 chr2 107629978 107631253 -145625330 + ERVL-C2 LTR ERVL 42 1470 -4294 388 300 18 18 chr2 107631296 107631439 -145625144 - ERVL LTR ERVL -370 5284 5163 424 299 40 58 chr2 107631673 107631947 -145624636 - MLT1C LTR MaLR -198 269 1 506 230 32 91 chr2 107631947 107632044 -145624539 - L1MC/D LINE L1 -349 5815 5774 2127 125 0 7 chr2 107632044 107632362 -145624221 - AluSx SINE Alu 0 312 1 506 230 32 91 chr2 107632362 107632499 -145624084 - L1MC/D LINE L1 -390 5774 5630 * 901 260 109 7 chr2 107632490 107632794 -145623789 - L1MEc LINE L1 -5984 412 78 236 310 0 17 chr2 107633622 107633738 -145622845 + (TA)n Simple_repeat Simple_repeat 1 114 0 1105 186 152 14 chr2 107633792 107633846 -145622737 + MER7A DNA MER2_type 31 76 -2953 2245 109 0 3 chr2 107633846 107634150 -145622433 + AluSq SINE Alu 1 303 -10 1105 186 152 14 chr2 107634150 107634390 -145622193 + MER7A DNA MER2_type 76 337 0 22 0 0 0 chr2 107634644 107634666 -145621917 + AT_rich Low_complexity Low_complexity 1 22 0 836 122 0 0 chr2 107634666 107634789 -145621794 + AluSp/q SINE Alu 183 305 -8 1755 177 0 3 chr2 107636572 107636866 -145619717 - AluJb SINE Alu -18 294 2 205 363 53 50 chr2 107637404 107637685 -145618898 + L2 LINE L2 2927 3208 -64 31 44 0 0 chr2 107638189 107638234 -145618349 + AT_rich Low_complexity Low_complexity 1 45 0 23 33 0 0 chr2 107638461 107638491 -145618092 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr2 107638536 107638560 -145618023 + AT_rich Low_complexity Low_complexity 1 24 0 23 33 0 0 chr2 107638632 107638662 -145617921 + AT_rich Low_complexity Low_complexity 1 30 0 2261 88 3 0 chr2 107639053 107639338 -145617245 + AluY SINE Alu 1 286 -25 320 303 0 0 chr2 107639361 107639450 -145617133 + L1MC4 LINE L1 6614 6702 -1340 317 290 0 21 chr2 107639474 107639567 -145617016 + L1MC4 LINE L1 6613 6703 -1339 * 329 241 0 17 chr2 107639519 107639638 -145616945 - L1MCa LINE L1 -1337 6985 1995 963 125 0 0 chr2 107639639 107639885 -145616698 + (TA)n Simple_repeat Simple_repeat 2 247 0 354 181 80 43 chr2 107640009 107640147 -145616436 - L1M4 LINE L1 -789 5357 5215 236 336 88 24 chr2 107640934 107641059 -145615524 - L2 LINE L2 -1 3271 3139 881 286 4 8 chr2 107641397 107641631 -145614952 + MIR SINE MIR 20 252 -10 441 0 0 0 chr2 107641663 107641712 -145614871 + (TG)n Simple_repeat Simple_repeat 2 50 0 364 351 74 10 chr2 107641913 107642115 -145614468 + L2 LINE L2 3095 3309 -4 587 315 93 9 chr2 107642867 107643083 -145613500 - MIR SINE MIR -28 234 1 1821 221 79 14 chr2 107644920 107645490 -145611093 - MER97a DNA MER1_type? -105 789 183 1449 141 14 95 chr2 107645750 107646081 -145610502 + MLT1B LTR MaLR 77 496 -9 2408 35 0 3 chr2 107646580 107646887 -145609696 + AluY SINE Alu 1 306 0 2040 109 14 14 chr2 107646987 107647281 -145609302 + AluSq SINE Alu 1 294 -19 510 73 109 0 chr2 107647281 107647550 -145609033 + (TA)n Simple_repeat Simple_repeat 1 298 0 34 0 0 0 chr2 107647550 107647584 -145608999 + AT_rich Low_complexity Low_complexity 1 34 0 746 54 83 10 chr2 107647584 107648090 -145608493 + (TA)n Simple_repeat Simple_repeat 1 542 0 308 137 39 0 chr2 107648102 107648204 -145608379 + (TA)n Simple_repeat Simple_repeat 2 107 0 486 231 56 121 chr2 107648370 107648708 -145607875 + L1ME3 LINE L1 5761 6076 -86 204 40 0 0 chr2 107649074 107649099 -145607484 + (TC)n Simple_repeat Simple_repeat 1 25 0 343 306 69 81 chr2 107649196 107649369 -145607214 + MER5B DNA MER1_type 1 171 -7 299 303 59 53 chr2 107649497 107649649 -145606934 - MLT1J2 LTR MaLR -24 426 274 186 335 131 18 chr2 107649865 107650086 -145606497 + L2 LINE L2 2232 2477 -837 1530 169 0 4 chr2 107650257 107650500 -145606083 - AluJb SINE Alu -12 300 59 401 222 128 0 chr2 107651035 107651152 -145605431 + MER105 DNA DNA 27 158 -46 228 35 0 0 chr2 107652501 107652530 -145604053 + (CA)n Simple_repeat Simple_repeat 2 30 0 1141 209 43 48 chr2 107652583 107652981 -145603602 + Charlie1 DNA MER1_type 2361 2756 -5 2520 52 3 0 chr2 107653175 107653483 -145603100 + AluY SINE Alu 1 309 -2 207 329 0 14 chr2 107654639 107654712 -145601871 - L2 LINE L2 0 3272 3201 334 212 0 0 chr2 107654785 107654851 -145601732 - MLT1I LTR MaLR 0 409 344 247 167 156 41 chr2 107654856 107654995 -145601588 + MLT1H1 LTR MaLR 1 163 -386 452 167 0 0 chr2 107655299 107655377 -145601206 - AluS SINE Alu -8 304 227 420 278 66 62 chr2 107655410 107655749 -145600834 - MLT1I LTR MaLR -63 346 16 765 235 27 22 chr2 107658026 107658209 -145598374 - MER5A DNA MER1_type -1 188 5 244 213 0 0 chr2 107658403 107658450 -145598133 - MER5A DNA MER1_type 0 189 143 684 272 28 0 chr2 107658567 107658747 -145597836 + MER5A DNA MER1_type 1 185 -4 598 245 90 7 chr2 107659047 107659202 -145597381 + MER5B DNA MER1_type 10 177 -1 934 174 6 29 chr2 107659258 107659430 -145597153 - AluJb SINE Alu -10 302 135 404 319 50 16 chr2 107659591 107659773 -145596810 + L3 LINE CR1 1384 1571 -6 262 289 54 48 chr2 107660038 107660204 -145596379 + L2 LINE L2 2236 2402 -912 339 290 38 46 chr2 107660280 107660487 -145596096 + MLT1H LTR MaLR 103 300 -109 333 0 0 0 chr2 107660840 107660877 -145595706 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 857 196 0 0 chr2 107660881 107661024 -145595559 + FRAM SINE Alu 4 146 -30 198 0 0 0 chr2 107661027 107661049 -145595534 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 24 0 0 0 chr2 107661170 107661194 -145595389 + AT_rich Low_complexity Low_complexity 1 24 0 239 359 6 6 chr2 107661197 107661356 -145595227 - L1MC5 LINE L1 -492 7469 7311 915 269 157 58 chr2 107661539 107662105 -145594478 - L1MC5 LINE L1 -1869 5939 5318 21 36 0 0 chr2 107662157 107662185 -145594398 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 107662352 107662374 -145594209 + AT_rich Low_complexity Low_complexity 1 22 0 * 757 315 115 39 chr2 107662372 107663096 -145593487 - L1MC5 LINE L1 -2527 3619 2841 208 262 0 16 chr2 107663820 107663881 -145592702 + A-rich Low_complexity Low_complexity 1 60 0 1010 267 45 32 chr2 107664066 107664441 -145592142 + L1MDa LINE L1 34 413 -6127 273 119 0 0 chr2 107665960 107666002 -145590581 + (T)n Simple_repeat Simple_repeat 1 42 0 208 148 93 0 chr2 107666602 107666656 -145589927 + A-rich Low_complexity Low_complexity 2 60 0 261 0 0 0 chr2 107670142 107670171 -145586412 + (TG)n Simple_repeat Simple_repeat 2 30 0 795 246 14 29 chr2 107671006 107671213 -145585370 + MER20 DNA MER1_type 16 219 0 22 35 0 0 chr2 107671859 107671888 -145584695 + AT_rich Low_complexity Low_complexity 1 29 0 2078 116 10 14 chr2 107672512 107672806 -145583777 - AluSp SINE Alu -20 293 1 215 296 86 0 chr2 107673021 107673102 -145583481 + MIR SINE MIR 157 244 -18 183 80 0 0 chr2 107673553 107673578 -145583005 + (A)n Simple_repeat Simple_repeat 1 25 0 2340 61 0 0 chr2 107674063 107674356 -145582227 + AluY SINE Alu 1 293 -18 355 256 33 8 chr2 107674541 107674662 -145581921 + (TA)n Simple_repeat Simple_repeat 2 125 0 210 37 0 0 chr2 107674666 107674693 -145581890 + (TG)n Simple_repeat Simple_repeat 2 28 0 24 77 0 0 chr2 107675042 107675094 -145581489 + AT_rich Low_complexity Low_complexity 1 52 0 283 270 122 89 chr2 107676021 107676358 -145580225 + L2 LINE L2 2925 3272 0 2234 215 36 34 chr2 107676793 107677346 -145579237 + MLT2B3 LTR ERVL 1 554 0 404 224 75 19 chr2 107677656 107677817 -145578766 - Charlie7 DNA MER1_type -3 2609 2440 528 265 34 39 chr2 107677819 107678053 -145578530 + L1MC4 LINE L1 7271 7503 -539 * 3597 194 56 60 chr2 107678049 107679392 -145577191 + L1M4 LINE L1 4159 5489 -695 539 282 89 48 chr2 107679446 107679783 -145576800 + L1MC4 LINE L1 7692 8042 0 28 0 0 0 chr2 107680997 107681025 -145575558 + AT_rich Low_complexity Low_complexity 1 28 0 277 333 8 0 chr2 107681077 107681194 -145575389 + L1MC4 LINE L1 7912 8029 -13 1681 192 0 0 chr2 107681217 107681493 -145575090 - AluJo SINE Alu -36 276 1 205 200 186 0 chr2 107681862 107681932 -145574651 - MIR SINE MIR -99 163 81 1511 233 188 0 chr2 107682025 107682446 -145574137 - MLT1D LTR MaLR 0 505 6 229 244 0 0 chr2 107682467 107682508 -145574075 + HAL1 LINE L1 779 819 -1688 428 291 114 61 chr2 107682525 107682964 -145573619 + HAL1 LINE L1 1144 1635 -872 1195 237 41 46 chr2 107682964 107683331 -145573252 + MLT1A1 LTR MaLR 1 365 0 428 291 114 61 chr2 107683331 107683592 -145572991 + HAL1 LINE L1 1635 1881 -626 403 206 0 0 chr2 107683636 107683709 -145572874 - MER5A DNA MER1_type -113 76 4 516 279 85 6 chr2 107683730 107683999 -145572584 + LTR16C LTR ERVL 96 437 -54 2762 3 0 0 chr2 107684442 107684739 -145571844 - AluYa5 SINE Alu -14 297 1 344 363 30 18 chr2 107685407 107685575 -145571008 + MIR3 SINE MIR 23 192 -16 2547 160 7 10 chr2 107685762 107686174 -145570409 + MSTB1 LTR MaLR 9 419 -13 2940 242 78 35 chr2 107686323 107686875 -145569708 + L1MCb LINE L1 1 527 -5705 2394 88 0 19 chr2 107686875 107687192 -145569391 + AluY SINE Alu 1 311 0 2940 242 78 35 chr2 107687192 107687955 -145568628 + L1MCb LINE L1 527 1383 -4849 487 207 112 0 chr2 107687957 107688126 -145568457 + L1MCb LINE L1 2341 2528 -4036 240 224 20 51 chr2 107688148 107688170 -145568413 - MER53 DNA DNA -12 177 156 2345 74 3 0 chr2 107688170 107688467 -145568116 - AluY SINE Alu -13 298 1 240 224 20 51 chr2 107688467 107688542 -145568041 - MER53 DNA DNA -33 156 83 4023 268 56 12 chr2 107688549 107690256 -145566327 + L1MCb LINE L1 2536 4321 -2243 3841 135 18 6 chr2 107690259 107690887 -145565696 - MER41B LTR ERV1 0 635 1 4355 100 24 6 chr2 107690887 107691516 -145565067 - MER41B-int LTR ERV1 -2 5944 5305 33538 84 5 9 chr2 107691518 107697084 -145559499 - L1PA6 LINE L1 -2 6152 611 526 116 70 0 chr2 107697087 107697173 -145559410 - MER41B-int LTR ERV1 -526 4489 4398 1803 83 35 96 chr2 107697212 107697525 -145559058 - MER41B-int LTR ERV1 -698 5248 4955 * 6730 203 100 78 chr2 107697510 107699731 -145556852 - MER41B-int LTR ERV1 -1963 4300 2008 2192 112 0 35 chr2 107699731 107700045 -145556538 - AluY SINE Alu -8 303 1 6730 203 100 78 chr2 107700045 107700539 -145556044 - MER41B-int LTR ERV1 -4255 2008 1526 4701 125 15 3 chr2 107700541 107701223 -145555360 - MER41B-int LTR ERV1 -5256 690 1 4386 107 9 0 chr2 107701223 107701852 -145554731 - MER41B LTR ERV1 0 635 1 2853 282 23 11 chr2 107701858 107702995 -145553588 + L1MCb LINE L1 4328 5516 -1048 677 189 89 0 chr2 107702994 107703163 -145553420 + L1MC3 LINE L1 7598 7781 -4 * 416 204 37 80 chr2 107703163 107703325 -145553258 - MER53 DNA DNA -12 177 23 2495 69 0 0 chr2 107703334 107703638 -145552945 - AluY SINE Alu -7 304 1 783 261 138 40 chr2 107704317 107704746 -145551837 + L2 LINE L2 2843 3313 0 3288 118 9 41 chr2 107705116 107705673 -145550910 + HSMAR2 DNA Mariner 2 540 -762 8101 146 29 8 chr2 107705775 107707094 -145549489 + Tigger2 DNA MER2_type 1373 2718 0 26 50 0 0 chr2 107707128 107707168 -145549415 + AT_rich Low_complexity Low_complexity 1 40 0 318 219 66 49 chr2 107707195 107707378 -145549205 - L1MC5 LINE L1 -178 7783 7598 4306 148 10 15 chr2 107707504 107708226 -145548357 + HSMAR2 DNA Mariner 585 1302 0 22 0 0 0 chr2 107708498 107708520 -145548063 + AT_rich Low_complexity Low_complexity 1 22 0 1241 270 89 44 chr2 107710131 107710650 -145545933 + MLT1F LTR MaLR 1 542 0 1970 159 129 5 chr2 107710722 107711094 -145545489 + MSTA LTR MaLR 11 428 0 6744 145 39 2 chr2 107711135 107712275 -145544308 + Tigger2 DNA MER2_type 1 1182 -1536 508 270 61 42 chr2 107712688 107713083 -145543500 - L1MC5 LINE L1 -745 7216 6814 23 0 0 0 chr2 107713338 107713361 -145543222 + AT_rich Low_complexity Low_complexity 1 23 0 204 40 0 0 chr2 107713550 107713575 -145543008 + (T)n Simple_repeat Simple_repeat 1 25 0 299 262 56 90 chr2 107714571 107714838 -145541745 + L1ME3 LINE L1 3271 3528 -2618 2249 57 0 0 chr2 107715881 107716164 -145540419 + AluY SINE Alu 1 283 -28 24 77 0 0 chr2 107718035 107718087 -145538496 + AT_rich Low_complexity Low_complexity 1 52 0 239 182 18 12 chr2 107718730 107718802 -145537781 + L1MD1 LINE L1 6175 6359 0 1309 223 98 123 chr2 107718982 107719829 -145536754 + L1ME3 LINE L1 5333 6162 0 295 77 0 0 chr2 107719873 107719912 -145536671 - AluSx SINE Alu -8 294 256 1421 139 5 0 chr2 107719913 107720121 -145536462 - AluSx SINE Alu -103 209 1 874 54 0 0 chr2 107720180 107720291 -145536292 - AluY SINE Alu -5 306 196 246 32 0 0 chr2 107720813 107720844 -145535739 + (CA)n Simple_repeat Simple_repeat 2 32 0 2128 127 0 7 chr2 107721796 107722095 -145534488 - AluSx SINE Alu -15 297 1 1875 122 0 62 chr2 107722563 107722867 -145533716 + AluSx SINE Alu 1 285 -27 322 385 26 21 chr2 107722869 107723061 -145533522 - MIR SINE MIR -16 246 54 5286 110 25 1 chr2 107723586 107724389 -145532194 - L1PA13 LINE L1 0 6163 5342 3585 275 14 11 chr2 107724390 107725204 -145531379 + L1P LINE L1 4276 5091 -1055 210 241 83 182 chr2 107725308 107725561 -145531022 + MIR SINE MIR 23 250 -12 192 40 0 0 chr2 107726298 107726323 -145530260 + (CA)n Simple_repeat Simple_repeat 2 26 0 443 371 16 16 chr2 107726443 107726629 -145529954 - MER5A DNA MER1_type 0 189 4 202 311 0 16 chr2 107726727 107726788 -145529795 - MIR3 SINE MIR -48 160 101 370 345 136 5 chr2 107726803 107727009 -145529574 - MIR SINE MIR 0 262 30 731 309 47 8 chr2 107727048 107727284 -145529299 - MIR SINE MIR -6 256 12 1769 144 112 9 chr2 107727423 107727762 -145528821 + THE1C LTR MaLR 1 374 -1 1242 239 74 35 chr2 107728871 107728946 -145527637 - L1ME3A LINE L1 0 6239 6168 228 86 0 0 chr2 107728946 107728981 -145527602 + (TA)n Simple_repeat Simple_repeat 1 35 0 1242 239 74 35 chr2 107728981 107729390 -145527193 - L1ME3A LINE L1 -71 6168 5738 1158 126 11 6 chr2 107729390 107729573 -145527010 + MLT2B1 LTR ERVL 1 184 -336 4644 260 92 37 chr2 107729574 107733866 -145522717 - L1P5 LINE L1 -657 5888 1832 2299 102 5 81 chr2 107733866 107734250 -145522333 - THE1A LTR MaLR 0 355 1 4644 260 92 37 chr2 107734250 107735031 -145521552 - L1P5 LINE L1 -4713 1832 1095 360 0 0 0 chr2 107735031 107735071 -145521512 + (TG)n Simple_repeat Simple_repeat 1 40 0 4644 260 92 37 chr2 107735071 107735146 -145521437 - L1P5 LINE L1 -5450 1095 21 1333 207 40 34 chr2 107735180 107735503 -145521080 + MLT1B LTR MaLR 1 325 -65 234 246 58 0 chr2 107735602 107735671 -145520912 + MLT1B LTR MaLR 302 374 0 1568 259 101 33 chr2 107735674 107736646 -145519937 - L1ME3A LINE L1 -843 5372 4335 301 336 67 22 chr2 107737269 107737403 -145519180 + L1ME LINE L1 5296 5435 -686 3280 35 2 5 chr2 107737726 107738130 -145518453 - L1PA4 LINE L1 -8 6147 5745 4296 42 0 0 chr2 107738131 107738828 -145517755 + L1PA4 LINE L1 5074 5770 -385 3759 253 121 29 chr2 107738859 107739237 -145517346 - L1MEc LINE L1 -1969 4246 3904 216 0 0 0 chr2 107739237 107739261 -145517322 + (TA)n Simple_repeat Simple_repeat 2 25 0 3759 253 121 29 chr2 107739261 107740877 -145515706 - L1MEc LINE L1 -2311 3904 2086 1076 281 90 28 chr2 107740972 107741640 -145514943 - L1MEc LINE L1 -4610 1786 1078 678 184 24 0 chr2 107741652 107741777 -145514806 - FLAM_C SINE Alu -13 130 3 2238 276 53 58 chr2 107741797 107742802 -145513781 - L1MEc LINE L1 -5320 1076 77 385 148 78 0 chr2 107742810 107742952 -145513631 + (TA)n Simple_repeat Simple_repeat 1 153 0 181 393 0 33 chr2 107744604 107744726 -145511857 - MIR SINE MIR -94 168 51 315 348 57 71 chr2 107744826 107745162 -145511421 + L2 LINE L2 2941 3271 -1 191 283 80 26 chr2 107747249 107747362 -145509221 - L2 LINE L2 -559 2755 2637 2341 107 0 3 chr2 107748694 107749002 -145507581 - AluSx SINE Alu -4 308 2 1269 206 69 26 chr2 107750442 107750839 -145505744 + MER54B LTR ERVL 475 792 -1 238 279 77 77 chr2 107751384 107751445 -145505138 - L1ME1 LINE L1 -4 6162 6102 2375 47 7 7 chr2 107751445 107751743 -145504840 - AluY SINE Alu -13 298 1 238 279 77 77 chr2 107751743 107751889 -145504694 - L1ME1 LINE L1 -63 6103 5955 1492 41 20 0 chr2 107751916 107752112 -145504471 - L1P2 LINE L1 -682 5472 5273 4804 185 60 27 chr2 107752114 107754545 -145502038 - L1PB3 LINE L1 -7 6147 3515 1957 177 25 21 chr2 107754545 107754985 -145501598 + MLT2A2 LTR ERVL 1 450 -104 7388 37 8 0 chr2 107754992 107756005 -145500578 - L1PA4 LINE L1 -1 6154 5141 421 20 0 0 chr2 107756005 107756055 -145500528 - L1P LINE L1 -955 5191 5142 * 647 13 0 0 chr2 107756053 107756129 -145500454 + L1P LINE L1 5049 5124 -1022 898 106 0 0 chr2 107756129 107756252 -145500331 + MLT2A2 LTR ERVL 331 453 0 1268 181 46 0 chr2 107756271 107756552 -145500031 - L1PB3 LINE L1 -2647 3499 3206 665 219 14 0 chr2 107756556 107756702 -145499881 - L1PA16 LINE L1 -6 6217 6070 2877 203 24 1 chr2 107756721 107757685 -145498898 - L1PA16 LINE L1 -522 5701 4724 645 149 4 36 chr2 107757686 107757949 -145498634 - AluJb SINE Alu -7 305 3 1904 190 21 64 chr2 107757991 107758500 -145498083 - L1PA16 LINE L1 -5219 985 1 1155 251 80 7 chr2 107758818 107759259 -145497324 - L1ME LINE L1 -473 5625 5149 1192 288 24 27 chr2 107759540 107760161 -145496422 - L1ME LINE L1 -1030 5050 4432 1165 249 39 61 chr2 107760147 107760347 -145496236 - L1ME LINE L1 -1990 4090 3887 * 5731 66 3 1 chr2 107760347 107761088 -145495495 - L1PA7 LINE L1 -5 6149 5408 1165 249 39 61 chr2 107761088 107761348 -145495235 - L1ME LINE L1 -2193 3887 3640 282 322 82 21 chr2 107761366 107761599 -145494984 - L1ME LINE L1 -5767 303 57 436 147 15 0 chr2 107761613 107761681 -145494902 - L1PA16 LINE L1 -419 5747 5679 2138 155 30 0 chr2 107761684 107762046 -145494537 + L1PA16 LINE L1 5760 6132 -34 208 259 0 0 chr2 107762325 107762379 -145494204 + A-rich Low_complexity Low_complexity 1 54 0 26 93 0 0 chr2 107762425 107762500 -145494083 + AT_rich Low_complexity Low_complexity 1 75 0 25 51 0 0 chr2 107762613 107762652 -145493931 + AT_rich Low_complexity Low_complexity 1 39 0 5301 166 16 15 chr2 107762821 107763702 -145492881 - L1MA7 LINE L1 -3 6288 5403 2171 117 3 0 chr2 107763702 107764002 -145492581 - AluSc SINE Alu -8 301 1 5301 166 16 15 chr2 107764002 107764175 -145492408 - L1MA7 LINE L1 -888 5403 5232 331 291 92 26 chr2 107764447 107764674 -145491909 + L1M4 LINE L1 4599 4840 -1306 1355 126 5 0 chr2 107764758 107764964 -145491619 - L1PA8 LINE L1 -3 6169 5963 1256 229 16 33 chr2 107765001 107765307 -145491276 + AluJo SINE Alu 3 303 -9 475 129 9 7 chr2 107766518 107766607 -145489976 - MLT1D LTR MaLR 0 505 378 22 0 0 0 chr2 107766689 107766711 -145489872 + AT_rich Low_complexity Low_complexity 1 22 0 191 233 0 14 chr2 107766803 107766876 -145489707 + A-rich Low_complexity Low_complexity 1 72 0 185 307 161 42 chr2 107766876 107767068 -145489515 - MIR SINE MIR 0 262 48 5602 110 21 8 chr2 107768320 107769147 -145487436 - L1PA10 LINE L1 0 6168 5332 1366 150 83 75 chr2 107769142 107769362 -145487221 + L1P LINE L1 2923 3149 -2997 * 405 0 0 0 chr2 107769362 107769407 -145487176 + (CA)n Simple_repeat Simple_repeat 2 46 0 1366 150 83 75 chr2 107769407 107769546 -145487037 + L1P LINE L1 3149 3285 -2861 37 76 0 0 chr2 107769629 107769708 -145486875 + AT_rich Low_complexity Low_complexity 1 79 0 23 0 0 0 chr2 107769846 107769869 -145486714 + AT_rich Low_complexity Low_complexity 1 23 0 2332 87 0 7 chr2 107769869 107770179 -145486404 - AluY SINE Alu -3 308 1 2075 189 67 57 chr2 107770806 107771313 -145485270 + MER73 LTR ERVL 1 512 -132 189 0 0 0 chr2 107771320 107771341 -145485242 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 755 178 8 0 chr2 107771560 107771689 -145484894 + MSTB1 LTR MaLR 303 432 0 12897 175 29 49 chr2 107771707 107777544 -145479039 - L1 LINE L1 -1128 6437 16 722 197 138 112 chr2 107777710 107778066 -145478517 - MLT1A1 LTR MaLR 0 365 1 29 0 0 0 chr2 107778192 107778221 -145478362 + AT_rich Low_complexity Low_complexity 1 29 0 229 341 0 80 chr2 107778457 107778595 -145477988 + MER5B DNA MER1_type 36 162 -16 1589 143 0 40 chr2 107778731 107779046 -145477537 + AluSx SINE Alu 21 324 0 326 328 58 26 chr2 107779208 107779397 -145477186 + L1MEc LINE L1 919 1113 -5283 226 288 36 55 chr2 107779416 107779635 -145476948 + L1MEc LINE L1 1122 1336 -4879 2188 94 0 7 chr2 107779913 107780220 -145476363 + AluY SINE Alu 1 305 -6 570 243 21 0 chr2 107780244 107780388 -145476195 + L1MB4 LINE L1 13 159 -6383 324 306 63 20 chr2 107780651 107780891 -145475692 + L1MB4 LINE L1 459 936 -5710 1039 136 95 32 chr2 107781180 107781401 -145475182 - THE1C LTR MaLR 0 375 141 8829 130 36 58 chr2 107781416 107783032 -145473551 - THE1C-int LTR MaLR 0 1580 1 2025 131 52 30 chr2 107783032 107783399 -145473184 - THE1C LTR MaLR 0 375 1 368 163 47 23 chr2 107783414 107783500 -145473083 + L1MB4 LINE L1 1016 1103 -5543 661 206 7 7 chr2 107783528 107783664 -145472919 + AluJb SINE Alu 159 294 -18 1853 245 93 80 chr2 107783685 107784076 -145472507 + L1MB4 LINE L1 1141 1525 -5119 1970 151 0 3 chr2 107784076 107784381 -145472202 + AluSc SINE Alu 3 306 -3 1853 245 93 80 chr2 107784381 107784673 -145471910 + L1MB4 LINE L1 1525 1812 -4832 7414 35 1 1 chr2 107784673 107785602 -145470981 + L1PA4 LINE L1 5220 6152 -3 1853 245 93 80 chr2 107785602 107786546 -145470037 + L1MB4 LINE L1 1812 2788 -3856 1838 272 43 18 chr2 107786551 107787291 -145469292 + L1MB4 LINE L1 2725 3483 -3161 * 3686 243 34 16 chr2 107787286 107789281 -145467302 + L1MB4 LINE L1 4622 6661 -17 183 129 0 0 chr2 107789281 107789312 -145467271 + (TATATG)n Simple_repeat Simple_repeat 5 35 0 186 103 0 0 chr2 107789314 107789343 -145467240 + (CA)n Simple_repeat Simple_repeat 2 30 0 1016 205 58 20 chr2 107789891 107790184 -145466399 + L1M4 LINE L1 5100 5403 -743 1091 253 77 16 chr2 107790197 107790509 -145466074 - MLT1C LTR MaLR -2 465 135 467 224 31 0 chr2 107790509 107790607 -145465976 + L1M4 LINE L1 5447 5547 -627 425 168 0 74 chr2 107790607 107790702 -145465881 - MLT1B LTR MaLR -171 219 132 3130 217 14 3 chr2 107790702 107791417 -145465166 + L1MB5 LINE L1 5444 6166 -8 3336 209 88 29 chr2 107791444 107792089 -145464494 + L1MC3 LINE L1 6763 7484 -301 2525 56 0 0 chr2 107792089 107792393 -145464190 - AluY SINE Alu -5 306 3 3336 209 88 29 chr2 107792393 107792706 -145463877 + L1MC3 LINE L1 7484 7777 -8 6152 78 46 0 chr2 107793904 107794970 -145461613 - L1PA10 LINE L1 0 6168 5111 1754 103 36 4 chr2 107794970 107795251 -145461332 + L1P5 LINE L1 5343 5632 -519 3875 97 25 18 chr2 107795371 107795849 -145460734 + L1PB1 LINE L1 5542 6026 -125 2163 122 0 0 chr2 107795849 107796161 -145460422 + AluSq SINE Alu 1 312 -1 3875 97 25 18 chr2 107796161 107796288 -145460295 + L1PB1 LINE L1 6026 6151 0 22 0 0 0 chr2 107796654 107796676 -145459907 + AT_rich Low_complexity Low_complexity 1 22 0 4264 200 19 33 chr2 107796751 107798252 -145458331 - L1MB7 LINE L1 -14 6668 5197 227 267 47 52 chr2 107798253 107798444 -145458139 - L1MB7 LINE L1 -1661 4983 4794 2849 273 87 13 chr2 107798449 107800029 -145456554 - L1MB7 LINE L1 -1933 4711 2955 2364 211 22 4 chr2 107800129 107800580 -145456003 + MER66B LTR ERV1 28 486 0 877 255 167 29 chr2 107800580 107801098 -145455485 - L1MB7 LINE L1 -3805 2839 2394 219 69 0 0 chr2 107801098 107801127 -145455456 + (CA)n Simple_repeat Simple_repeat 1 29 0 877 255 167 29 chr2 107801127 107801470 -145455113 - L1MB7 LINE L1 -4250 2394 1837 2074 246 11 94 chr2 107801479 107802223 -145454360 - L1MB7 LINE L1 -5852 690 9 372 304 94 12 chr2 107802725 107802896 -145453687 + L1MEc LINE L1 798 982 -5414 215 243 0 14 chr2 107803103 107803177 -145453406 + CT-rich Low_complexity Low_complexity 4 76 0 25 0 0 0 chr2 107804621 107804646 -145451937 + AT_rich Low_complexity Low_complexity 1 25 0 1255 195 130 0 chr2 107805121 107805383 -145451200 + AluJb SINE Alu 1 296 -16 202 184 0 41 chr2 107805403 107805418 -145451165 + GA-rich Low_complexity Low_complexity 1 15 -32 2188 112 0 13 chr2 107805418 107805912 -145450671 + AluSg SINE Alu 1 310 0 202 184 0 41 chr2 107805912 107805945 -145450638 + GA-rich Low_complexity Low_complexity 15 47 0 420 143 0 0 chr2 107805946 107806016 -145450567 + AluS SINE Alu 230 299 -1 206 61 0 30 chr2 107806016 107806049 -145450534 + (GGAA)n Simple_repeat Simple_repeat 1 32 0 287 312 135 14 chr2 107806866 107807007 -145449576 + MIR SINE MIR 41 198 -64 207 279 0 13 chr2 107807204 107807283 -145449300 + (TAA)n Simple_repeat Simple_repeat 2 79 0 1057 137 0 0 chr2 107808867 107809013 -145447570 - AluSg SINE Alu -163 147 2 254 223 57 102 chr2 107809015 107809172 -145447411 - L1ME1 LINE L1 -220 5946 5797 355 227 136 81 chr2 107809196 107809469 -145447114 - L1ME1 LINE L1 -578 5586 5299 28 29 0 0 chr2 107809498 107809533 -145447050 + AT_rich Low_complexity Low_complexity 1 35 0 405 163 58 0 chr2 107809609 107809695 -145446888 - L1MC2 LINE L1 -8 6336 6246 246 326 67 48 chr2 107810070 107810340 -145446243 + L3 LINE CR1 740 1014 -563 213 373 119 0 chr2 107810556 107810690 -145445893 + L3 LINE CR1 1409 1558 -19 21 0 0 0 chr2 107810694 107810715 -145445868 + AT_rich Low_complexity Low_complexity 1 21 0 555 161 58 32 chr2 107810715 107810870 -145445713 - Looper DNA T2_type -2 1556 1398 1010 246 55 28 chr2 107810886 107811508 -145445075 - Looper DNA T2_type -598 960 252 5704 63 148 110 chr2 107811557 107812686 -145443897 + MER11A LTR ERVK 1 1266 0 2917 267 27 20 chr2 107812686 107813793 -145442790 + L1PA16 LINE L1 1409 2531 -4266 2027 134 76 17 chr2 107813793 107814137 -145442446 + THE1B LTR MaLR 1 364 0 10398 115 3 12 chr2 107814137 107815728 -145440855 + THE1B-int LTR MaLR 1 1580 0 2021 139 75 20 chr2 107815728 107816073 -145440510 + THE1B LTR MaLR 1 364 0 11689 213 33 46 chr2 107816073 107820411 -145436172 + L1PA16 LINE L1 2527 6801 -16 688 226 35 13 chr2 107820430 107820656 -145435927 - Looper DNA T2_type -1304 254 24 23 33 0 0 chr2 107820755 107820785 -145435798 + AT_rich Low_complexity Low_complexity 1 30 0 226 221 39 52 chr2 107821239 107821316 -145435267 - MLT1F1 LTR MaLR -185 357 282 279 299 120 25 chr2 107821362 107821538 -145435045 - MLT1F1 LTR MaLR -265 289 87 267 314 0 9 chr2 107822737 107822842 -145433741 - MLT1-int LTR MaLR -843 528 425 218 184 0 0 chr2 107823486 107823524 -145433059 + (TTG)n Simple_repeat Simple_repeat 2 39 0 21 0 0 0 chr2 107824538 107824559 -145432024 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 107824708 107824729 -145431854 + AT_rich Low_complexity Low_complexity 1 21 0 2183 283 74 28 chr2 107826134 107828504 -145428079 + L1ME2 LINE L1 1388 3829 -2386 814 296 150 24 chr2 107828528 107829050 -145427533 + MLT1F1 LTR MaLR 1 549 -18 248 256 237 14 chr2 107829065 107829276 -145427307 + L1ME2 LINE L1 3934 4191 -2024 24 85 0 0 chr2 107829280 107829339 -145427244 + AT_rich Low_complexity Low_complexity 1 59 0 2386 257 74 35 chr2 107829347 107830017 -145426566 + L1ME2 LINE L1 4157 4799 -1434 2574 57 0 0 chr2 107830017 107830316 -145426267 + AluY SINE Alu 2 300 -11 2386 257 74 35 chr2 107830316 107831641 -145424942 + L1ME2 LINE L1 4799 6224 -9 244 206 16 16 chr2 107831978 107832041 -145424542 + (TA)n Simple_repeat Simple_repeat 2 64 0 2058 224 18 11 chr2 107833141 107833583 -145423000 - MER74A LTR ERVL 0 558 114 237 317 81 50 chr2 107834402 107834563 -145422020 + MLT1H LTR MaLR 382 547 -2 618 225 53 7 chr2 107835880 107836031 -145420552 + MER5A DNA MER1_type 26 183 -6 582 287 29 29 chr2 107836046 107836220 -145420363 - MER5A DNA MER1_type -1 188 15 598 313 95 7 chr2 107836293 107836597 -145419986 + MLT1E2 LTR MaLR 2 332 -292 240 250 0 0 chr2 107836681 107836733 -145419850 + LTR30 LTR ERV1 1 52 -670 2537 128 16 47 chr2 107836744 107837174 -145419409 + LTR12 LTR ERV1 68 484 -230 800 193 114 6 chr2 107837182 107837358 -145419225 + MLT1E2 LTR MaLR 432 626 0 1420 224 0 22 chr2 107837448 107837760 -145418823 - AluJb SINE Alu -7 305 1 198 0 0 0 chr2 107838102 107838124 -145418459 + (TTA)n Simple_repeat Simple_repeat 2 23 0 2529 53 3 0 chr2 107840057 107840360 -145416223 + AluY SINE Alu 1 304 -7 3343 263 64 20 chr2 107841137 107843724 -145412859 + L1M3b LINE L1 2049 4514 -3051 566 223 27 16 chr2 107844338 107844526 -145412057 + L1M3b LINE L1 4495 4684 -2881 4626 202 39 9 chr2 107844527 107845586 -145410997 + L1M3b LINE L1 5078 6167 -1398 1045 181 146 4 chr2 107846593 107846847 -145409736 - AluJo SINE Alu 0 312 23 644 205 93 7 chr2 107847062 107847213 -145409370 - FAM SINE Alu -7 168 5 2539 138 20 9 chr2 107847600 107848132 -145408451 - L1M1 LINE L1 -596 5704 5174 1717 174 51 11 chr2 107848132 107848502 -145408081 + L1MA4 LINE L1 5907 6294 -6 249 329 14 0 chr2 107849263 107849336 -145407247 + L2 LINE L2 2959 3032 -240 306 317 87 25 chr2 107849541 107849702 -145406881 + MIR SINE MIR 74 244 -18 246 133 147 27 chr2 107850670 107850745 -145405838 + L1ME4a LINE L1 6025 6108 -13 714 211 62 0 chr2 107851213 107851374 -145405209 + MER63A DNA MER1_type 1 171 -39 403 196 0 0 chr2 107851795 107851887 -145404696 + L1MCa LINE L1 1819 1910 -4516 23 33 0 0 chr2 107851890 107851920 -145404663 + AT_rich Low_complexity Low_complexity 1 30 0 1566 116 98 14 chr2 107851924 107852201 -145404382 - L1PA10 LINE L1 -4 6164 5865 4089 168 24 11 chr2 107852204 107852991 -145403592 - L1P LINE L1 -2145 4001 3205 2571 37 0 0 chr2 107853004 107853299 -145403284 + AluY SINE Alu 1 295 -16 2220 109 0 37 chr2 107853906 107854227 -145402356 + AluSx SINE Alu 1 309 -3 264 318 154 30 chr2 107854829 107855128 -145401455 - L2 LINE L2 -16 3256 2921 1644 176 24 7 chr2 107856719 107857009 -145399574 + AluSx SINE Alu 3 297 -15 827 263 126 27 chr2 107858086 107858401 -145398182 + MLT1G LTR MaLR 14 296 -299 1861 132 30 79 chr2 107858401 107858794 -145397789 + THE1C LTR MaLR 1 374 -1 827 263 126 27 chr2 107858794 107858945 -145397638 + MLT1G LTR MaLR 296 595 0 279 301 18 62 chr2 107859315 107859428 -145397155 - L2 LINE L2 -15 3298 3191 30994 109 21 61 chr2 107860081 107866490 -145390093 + L1PA7 LINE L1 13 6154 0 320 300 97 11 chr2 107866744 107866923 -145389660 + L1ME4a LINE L1 5220 5411 -768 1524 183 21 11 chr2 107866984 107867269 -145389314 - AluJo SINE Alu -20 292 5 2935 160 32 4 chr2 107867301 107867864 -145388719 - L1MB2 LINE L1 -6 6165 5587 689 262 76 21 chr2 107867918 107868434 -145388149 + L1ME4a LINE L1 5527 6118 -3 804 272 50 93 chr2 107868496 107869091 -145387492 - L2 LINE L2 -3 3310 2753 391 159 0 0 chr2 107869223 107869286 -145387297 - L2 LINE L2 -1860 1454 1392 1624 170 29 55 chr2 107869583 107869895 -145386688 - AluJo SINE Alu -6 306 3 251 319 147 45 chr2 107870774 107870788 -145385795 + L2 LINE L2 2807 2818 -454 2143 107 10 3 chr2 107870788 107871079 -145385504 - AluSx SINE Alu -19 293 1 251 319 147 45 chr2 107871079 107871487 -145385096 + L2 LINE L2 2818 3272 0 380 40 53 27 chr2 107871642 107871717 -145384866 + (TCTA)n Simple_repeat Simple_repeat 4 80 0 186 420 0 12 chr2 107873203 107873284 -145383299 - MIR SINE MIR -151 111 32 475 156 0 64 chr2 107873450 107873559 -145383024 + Ricksha DNA DNA 14 115 -3131 * 6336 132 25 23 chr2 107873544 107874137 -145382446 + Ricksha DNA DNA 1709 2306 -940 2099 99 26 29 chr2 107874137 107874449 -145382134 + AluSx SINE Alu 1 311 -1 6336 132 25 23 chr2 107874449 107874955 -145381628 + Ricksha DNA DNA 2306 2810 -436 1033 150 14 14 chr2 107874969 107875189 -145381394 + Ricksha DNA DNA 3022 3241 -10 571 225 113 70 chr2 107875237 107875675 -145380908 + MLT1G LTR MaLR 60 537 -5 222 133 67 0 chr2 107875799 107875844 -145380739 + CT-rich Low_complexity Low_complexity 3 50 0 285 75 0 0 chr2 107875848 107875888 -145380695 + (CAA)n Simple_repeat Simple_repeat 2 41 0 1088 251 59 74 chr2 107875971 107876445 -145380138 + LTR40a LTR ERVL 1 467 -52 1111 124 0 0 chr2 107876445 107876623 -145379960 - L1MC/D LINE L1 -821 5932 5755 1426 140 60 19 chr2 107876623 107876886 -145379697 - Tigger3(Golem) DNA MER2_type -1 3028 2755 408 38 0 0 chr2 107876886 107876939 -145379644 + MADE1 DNA Mariner 2 54 -26 350 240 0 0 chr2 107876955 107877030 -145379553 - Tigger3(Golem) DNA MER2_type -2954 75 1 246 216 0 0 chr2 107877030 107877081 -145379502 - L1MC/D LINE L1 -880 5756 5706 930 222 12 4 chr2 107877200 107877452 -145379131 - L1MC/D LINE L1 -896 5644 5391 1340 237 19 9 chr2 107877486 107877803 -145378780 + MLT1B LTR MaLR 66 385 -5 14629 188 73 36 chr2 107877853 107878861 -145377722 - L1P LINE L1 -1610 4536 3566 1483 154 95 39 chr2 107878861 107879146 -145377437 - AluJb SINE Alu -9 303 3 14629 188 73 36 chr2 107879146 107882214 -145374369 - L1P LINE L1 -2580 3566 311 818 264 73 31 chr2 107882359 107882836 -145373747 - L1P LINE L1 -5639 507 11 1542 265 12 45 chr2 107882863 107883591 -145372992 - L1MC/D LINE L1 -3227 3313 2610 498 167 12 0 chr2 107883591 107883675 -145372908 - AluSq/x SINE Alu -197 116 32 800 127 25 0 chr2 107883692 107883850 -145372733 - L1MC/D LINE L1 -4002 2538 2377 261 269 15 0 chr2 107883852 107883919 -145372664 - Tigger1 DNA MER2_type -3 2415 2348 1413 108 5 68 chr2 107884022 107884244 -145372339 - AluSq SINE Alu -105 208 1 9353 152 108 16 chr2 107884245 107884612 -145371971 - Tigger1 DNA MER2_type -331 2087 1755 1978 131 3 0 chr2 107884612 107884923 -145371660 - AluSx SINE Alu 0 314 3 9353 152 108 16 chr2 107884923 107886119 -145370464 - Tigger1 DNA MER2_type -663 1755 314 239 0 32 0 chr2 107886119 107886150 -145370433 + (GA)n Simple_repeat Simple_repeat 1 32 0 9353 152 108 16 chr2 107886150 107886494 -145370089 - Tigger1 DNA MER2_type -2104 314 3 5301 234 74 20 chr2 107886496 107887528 -145369055 - L1MDa LINE L1 -4162 2378 1404 1549 192 0 93 chr2 107887528 107887862 -145368721 + AluJo SINE Alu 1 303 -9 5301 234 74 20 chr2 107887862 107888986 -145367597 - L1MDa LINE L1 -5136 1404 31 192 40 0 0 chr2 107889119 107889144 -145367439 + (TTG)n Simple_repeat Simple_repeat 2 26 0 1439 195 50 34 chr2 107889146 107889444 -145367139 - AluJo SINE Alu -9 303 1 1010 236 109 0 chr2 107889639 107889915 -145366668 + LTR16C LTR ERVL 165 470 -21 592 273 66 11 chr2 107890067 107890250 -145366333 + MIR SINE MIR 53 245 -17 3473 118 27 8 chr2 107890939 107891458 -145365125 + MER1A DNA MER1_type 1 529 0 283 226 38 15 chr2 107891560 107891693 -145364890 + (TA)n Simple_repeat Simple_repeat 2 137 0 2632 225 68 44 chr2 107891695 107892465 -145364118 + MER21B LTR ERV1 16 803 -60 2270 120 0 0 chr2 107892894 107893202 -145363381 + AluSx SINE Alu 1 308 -4 241 282 62 57 chr2 107893633 107893860 -145362723 + HAL1b LINE L1 400 627 -721 2159 170 64 12 chr2 107893949 107894354 -145362229 - MSTB LTR MaLR 0 426 1 642 322 107 55 chr2 107894655 107895217 -145361366 + L1M4 LINE L1 3634 4224 -1922 944 209 0 0 chr2 107895352 107895510 -145361073 - FRAM SINE Alu -22 154 1 311 333 84 53 chr2 107895514 107895907 -145360676 + L1M4 LINE L1 4385 4789 -1357 3359 76 21 0 chr2 107895948 107896336 -145360247 + MLT2A1 LTR ERVL 1 400 -44 186 43 0 0 chr2 107896336 107896359 -145360224 + (TATG)n Simple_repeat Simple_repeat 2 24 0 3359 76 21 0 chr2 107896359 107896405 -145360178 + MLT2A1 LTR ERVL 400 444 0 40670 67 13 3 chr2 107896405 107901794 -145354789 + HERVL-A1 LTR ERVL 1 5445 -209 339 85 0 0 chr2 107901902 107901920 -145354663 + (CA)n Simple_repeat Simple_repeat 1 65 0 339 85 0 0 chr2 107901920 107901967 -145354616 + (CA)n Simple_repeat Simple_repeat 2 48 0 2075 75 0 19 chr2 107902002 107902270 -145354313 - AluY SINE Alu -25 286 24 380 21 0 0 chr2 107902270 107902317 -145354266 + MLT2A1 LTR ERVL 398 444 0 2586 58 0 3 chr2 107903117 107903428 -145353155 - AluY SINE Alu -1 310 1 228 184 0 0 chr2 107906910 107906959 -145349624 + CT-rich Low_complexity Low_complexity 4 52 0 856 177 50 6 chr2 107907391 107907572 -145349011 + MER5A DNA MER1_type 1 189 0 24 0 0 0 chr2 107908050 107908074 -145348509 + AT_rich Low_complexity Low_complexity 1 24 0 232 230 40 20 chr2 107908742 107908842 -145347741 + (TA)n Simple_repeat Simple_repeat 1 102 0 423 206 14 110 chr2 107908849 107909058 -145347525 - MER112 DNA MER1_type -9 251 63 433 261 7 63 chr2 107909309 107909336 -145347247 + MIR SINE MIR 97 124 -138 2398 82 0 25 chr2 107909336 107909652 -145346931 - AluY SINE Alu -3 308 1 433 261 7 63 chr2 107909652 107909766 -145346817 + MIR SINE MIR 124 230 -32 182 122 0 146 chr2 107910139 107910159 -145346424 + L3 LINE CR1 1532 1545 -32 1497 220 40 8 chr2 107910159 107910537 -145346046 + MLT1B LTR MaLR 1 390 0 182 122 0 146 chr2 107910537 107910557 -145346026 + L3 LINE CR1 1545 1566 -11 315 162 117 72 chr2 107910856 107910967 -145345616 + MLT1C LTR MaLR 6 121 -346 * 1162 165 45 103 chr2 107910966 107911370 -145345213 + MLT1C LTR MaLR 74 467 0 248 288 12 50 chr2 107911539 107911619 -145344964 - L2 LINE L2 -2 3311 3235 2098 117 7 0 chr2 107911623 107911913 -145344670 + AluSx SINE Alu 1 292 -20 207 0 0 0 chr2 107912387 107912410 -145344173 + (A)n Simple_repeat Simple_repeat 1 23 0 339 269 17 67 chr2 107913184 107913303 -145343280 + MER5A DNA MER1_type 75 187 -2 184 289 0 0 chr2 107913989 107914034 -145342549 + MIR3 SINE MIR 151 195 -13 255 229 0 0 chr2 107914862 107914923 -145341660 + (TG)n Simple_repeat Simple_repeat 1 61 0 227 275 38 38 chr2 107915468 107915548 -145341035 - MER5B DNA MER1_type -94 84 5 213 205 0 0 chr2 107915578 107915617 -145340966 - MIR SINE MIR -6 256 218 604 293 116 5 chr2 107918080 107918295 -145338288 + MIR SINE MIR 17 255 -7 290 349 68 7 chr2 107918678 107918824 -145337759 - MIR SINE MIR -74 188 34 446 229 9 9 chr2 107918838 107918947 -145337636 - MLT1A1 LTR MaLR -256 109 1 2242 93 0 0 chr2 107919427 107919716 -145336867 - AluSg SINE Alu -17 293 5 202 323 20 40 chr2 107919721 107919820 -145336763 - L2 LINE L2 -10 3303 3207 444 216 41 0 chr2 107919890 107919987 -145336596 + MER81 DNA DNA 4 104 -10 1187 181 101 33 chr2 107920040 107920435 -145336148 + MER31B LTR ERV1 1 438 -28 204 308 162 34 chr2 107921085 107921202 -145335381 + MIR SINE MIR 26 157 -105 639 193 0 29 chr2 107921796 107921936 -145334647 - FLAM_C SINE Alu 0 143 8 239 213 49 16 chr2 107921954 107922015 -145334568 - MIR SINE MIR -74 188 126 473 170 10 20 chr2 107922442 107922542 -145334041 - MER58B DNA MER1_type -2 339 241 566 229 0 0 chr2 107922836 107922954 -145333629 + Tigger1 DNA MER2_type 1 118 -2300 2299 95 40 0 chr2 107923061 107923409 -145333174 - L1MA2 LINE L1 -7 6297 5936 225 159 0 0 chr2 107923409 107923453 -145333130 + CT-rich Low_complexity Low_complexity 4 47 0 2467 93 0 0 chr2 107923453 107923765 -145332818 - AluSx SINE Alu 0 312 1 4173 124 31 34 chr2 107923766 107923960 -145332623 - L1MA2 LINE L1 -354 5951 5758 2451 71 0 10 chr2 107923960 107924270 -145332313 - AluY SINE Alu -4 307 1 4173 124 31 34 chr2 107924270 107925078 -145331505 - L1MA2 LINE L1 -547 5758 4964 797 139 7 7 chr2 107925122 107925259 -145331324 + Tigger1 DNA MER2_type 2282 2418 0 1050 201 62 36 chr2 107925690 107925873 -145330710 + MLT2D LTR ERVL 129 323 -91 1844 174 18 15 chr2 107925873 107926212 -145330371 + MER61A LTR ERV1 1 340 -3 1050 201 62 36 chr2 107926212 107926302 -145330281 + MLT2D LTR ERVL 323 409 -5 183 186 0 0 chr2 107926616 107926659 -145329924 + GA-rich Low_complexity Low_complexity 2 44 0 923 208 23 32 chr2 107928861 107929082 -145327501 - MER20 DNA MER1_type 0 219 1 191 177 165 76 chr2 107930863 107930942 -145325641 - MIR3 SINE MIR -1 207 122 253 322 56 0 chr2 107931662 107931752 -145324831 + MIR SINE MIR 20 114 -94 2135 98 44 7 chr2 107931959 107932255 -145324328 - AluSg SINE Alu -3 307 1 1987 124 0 3 chr2 107936890 107937172 -145319411 - AluSx SINE Alu -30 282 2 227 317 83 17 chr2 107937930 107938050 -145318533 - MIR3 SINE MIR -76 132 5 1574 146 63 30 chr2 107938580 107938882 -145317701 + AluSx SINE Alu 1 312 0 2262 106 0 7 chr2 107939007 107939310 -145317273 - AluSg1 SINE Alu -8 301 1 2346 50 0 4 chr2 107939887 107940166 -145316417 + AluY SINE Alu 1 278 -33 293 216 81 19 chr2 107940941 107941045 -145315538 - MIR SINE MIR -67 141 52 489 278 125 9 chr2 107943629 107943845 -145312738 - MIR SINE MIR 0 262 22 339 136 0 0 chr2 107944222 107944281 -145312302 + (TG)n Simple_repeat Simple_repeat 2 60 0 288 77 0 0 chr2 107944383 107944422 -145312161 + (TG)n Simple_repeat Simple_repeat 2 40 0 376 318 0 0 chr2 107944692 107944821 -145311762 + MLT1I LTR MaLR 1 129 -280 980 155 39 56 chr2 107944877 107945161 -145311422 - MER33 DNA MER1_type -28 296 18 468 253 55 20 chr2 107945187 107945389 -145311194 + MLT1I LTR MaLR 197 405 -4 243 234 11 43 chr2 107945414 107945508 -145311075 - L1MC/D LINE L1 -1989 5819 5729 22 0 0 0 chr2 107946413 107946435 -145310148 + AT_rich Low_complexity Low_complexity 1 22 0 498 236 18 0 chr2 107946696 107946806 -145309777 - MIR SINE MIR -94 168 57 21 36 0 0 chr2 107947768 107947796 -145308787 + AT_rich Low_complexity Low_complexity 1 28 0 218 32 32 0 chr2 107948701 107948732 -145307851 + (TC)n Simple_repeat Simple_repeat 1 32 0 2339 90 0 0 chr2 107948732 107949031 -145307552 - AluSg SINE Alu -11 299 1 203 189 0 0 chr2 107949844 107949881 -145306702 + A-rich Low_complexity Low_complexity 1 37 0 647 139 0 0 chr2 107950692 107950807 -145305776 + FRAM SINE Alu 61 175 -1 363 23 0 0 chr2 107950810 107950854 -145305729 + (CA)n Simple_repeat Simple_repeat 2 45 0 267 152 0 0 chr2 107952811 107952857 -145303726 + T-rich Low_complexity Low_complexity 1 46 0 198 0 0 0 chr2 107953324 107953346 -145303237 + (TC)n Simple_repeat Simple_repeat 2 23 0 225 94 0 0 chr2 107953848 107953880 -145302703 + (TG)n Simple_repeat Simple_repeat 1 32 0 180 0 0 0 chr2 107954865 107954885 -145301698 + (T)n Simple_repeat Simple_repeat 1 20 0 2296 107 3 0 chr2 107956321 107956621 -145299962 + AluSp SINE Alu 1 301 -12 3486 152 28 16 chr2 107958220 107958892 -145297691 - L1MB3 LINE L1 -2 6181 5502 657 93 29 36 chr2 107958893 107959033 -145297550 + CT-rich Low_complexity Low_complexity 4 142 0 836 104 16 44 chr2 107959034 107959217 -145297366 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 275 136 0 0 chr2 107959218 107959262 -145297321 + (TC)n Simple_repeat Simple_repeat 1 44 0 302 171 14 0 chr2 107959272 107959342 -145297241 + C-rich Low_complexity Low_complexity 2 72 0 231 188 0 0 chr2 107959336 107959384 -145297199 + CT-rich Low_complexity Low_complexity 3 50 0 * 324 0 0 0 chr2 107960563 107960599 -145295984 + (CA)n Simple_repeat Simple_repeat 2 37 0 22 35 0 0 chr2 107961794 107961823 -145294760 + AT_rich Low_complexity Low_complexity 1 29 0 234 91 0 0 chr2 107962497 107962530 -145294053 + (TTA)n Simple_repeat Simple_repeat 3 35 0 514 229 0 18 chr2 107963242 107963351 -145293232 + L2 LINE L2 3202 3308 -5 7469 34 0 0 chr2 107963558 107964715 -145291868 - L1PA4 LINE L1 0 6155 5003 2181 110 3 3 chr2 107966948 107967239 -145289344 + AluSx SINE Alu 1 291 -21 408 20 0 0 chr2 107967239 107967288 -145289295 + (CA)n Simple_repeat Simple_repeat 2 50 0 440 278 17 26 chr2 107968573 107968688 -145287895 - MER91A DNA MER1_type -11 185 72 265 258 16 0 chr2 107968852 107968914 -145287669 - MIR SINE MIR -62 146 84 309 343 68 14 chr2 107969007 107969153 -145287430 + L2 LINE L2 3158 3311 -2 1815 105 76 0 chr2 107973475 107973752 -145282831 + AluSx SINE Alu 1 298 -14 729 221 20 7 chr2 107974407 107974556 -145282027 - MLT1A1 LTR MaLR -11 354 204 2174 191 18 13 chr2 107974559 107974951 -145281632 + MSTD LTR MaLR 1 394 -2 2448 224 15 4 chr2 107974951 107975491 -145281092 + MSTD-int LTR MaLR 2 547 -1188 2125 230 137 0 chr2 107975484 107975979 -145280604 + MSTD-int LTR MaLR 1173 1735 0 * 582 148 0 0 chr2 107975979 107976060 -145280523 + MSTD LTR MaLR 1 81 -315 377 127 0 28 chr2 107976110 107976181 -145280402 + (TCC)n Simple_repeat Simple_repeat 1 69 0 1658 186 10 0 chr2 107976181 107976477 -145280106 - AluJb SINE Alu -13 299 1 229 273 53 53 chr2 107976709 107976859 -145279724 + LTR48 LTR ERV1 629 778 -9 854 209 143 0 chr2 107977368 107977564 -145279019 + MER58A DNA MER1_type 1 224 0 2141 121 10 0 chr2 107980456 107980754 -145275829 - AluSx SINE Alu -11 301 1 2303 71 0 3 chr2 107981831 107982114 -145274469 + AluY SINE Alu 1 282 -29 1677 175 7 16 chr2 107982130 107982439 -145274144 - MLT1A1 LTR MaLR -59 306 1 192 125 0 0 chr2 107983024 107983056 -145273527 + (TTC)n Simple_repeat Simple_repeat 1 32 0 5037 226 61 54 chr2 107983677 107985206 -145271377 + L1MDa LINE L1 17 1556 -4984 1277 168 96 3 chr2 107985207 107985499 -145271084 + L1MDa LINE L1 2298 2616 -3924 293 190 60 60 chr2 107985594 107985694 -145270889 + L1ME3 LINE L1 6017 6116 -46 544 191 97 5 chr2 107985694 107985829 -145270754 + L1MD2 LINE L1 6205 7973 -22 186 103 0 0 chr2 107985877 107985906 -145270677 + (TGGA)n Simple_repeat Simple_repeat 3 31 0 267 257 57 0 chr2 107989214 107989354 -145267229 - L1MDa LINE L1 -2952 3177 3030 331 181 223 0 chr2 107989568 107989662 -145266921 + MER69 DNA AcHobo 21 135 -1091 1910 103 44 11 chr2 107989755 107990077 -145266506 - AluSx SINE Alu 0 331 1 260 0 57 0 chr2 107990355 107990390 -145266193 + (TTTC)n Simple_repeat Simple_repeat 4 40 0 2045 147 3 3 chr2 107990396 107990703 -145265880 - AluSq SINE Alu -6 307 1 365 264 113 28 chr2 107990833 107991302 -145265281 - L1MDa LINE L1 -4701 1428 920 1791 126 54 4 chr2 107991699 107991977 -145264606 + AluSq SINE Alu 1 292 -21 369 43 0 0 chr2 107991977 107992024 -145264559 + (GGAA)n Simple_repeat Simple_repeat 1 47 0 250 170 0 0 chr2 107992024 107992077 -145264506 + AluSp/q SINE Alu 251 303 0 1047 216 28 9 chr2 107992518 107992731 -145263852 - U3 snRNA snRNA 0 217 1 278 276 49 92 chr2 107992807 107992970 -145263613 - MIR SINE MIR -11 251 96 704 265 85 14 chr2 107993072 107993283 -145263300 - MIR SINE MIR 0 262 37 267 280 0 0 chr2 107994143 107994218 -145262365 - tRNA-Ile-ATT tRNA tRNA -2 75 1 6756 95 6 3 chr2 107994857 107996557 -145260026 - L1PA10 LINE L1 -5 6163 4462 330 262 63 52 chr2 107997007 107997198 -145259385 - MIR SINE MIR -49 213 21 713 295 0 0 chr2 107997202 107997375 -145259208 + MER58A DNA MER1_type 1 173 -51 849 223 0 6 chr2 107997379 107997536 -145259047 - MER45A DNA AcHobo -22 156 1 263 344 64 16 chr2 107998395 107998520 -145258063 - MIR3 SINE MIR -63 145 15 1085 211 16 0 chr2 107999202 107999387 -145257196 + MER5A DNA MER1_type 1 188 -1 240 333 0 0 chr2 107999424 107999496 -145257087 + MLT1I LTR MaLR 70 141 -268 361 244 67 17 chr2 107999991 108000110 -145256473 - LTR33A LTR ERVL -34 489 365 301 304 18 35 chr2 108000207 108000322 -145256261 + LTR16C LTR ERVL 334 479 -12 324 0 0 0 chr2 108000556 108000592 -145255991 + (TG)n Simple_repeat Simple_repeat 1 36 0 274 320 23 17 chr2 108000997 108001146 -145255437 - MIR SINE MIR -65 143 34 302 247 69 104 chr2 108001207 108001340 -145255243 + MIR SINE MIR 4 129 -133 885 227 6 6 chr2 108001340 108001503 -145255080 + FRAM SINE Alu 1 163 -3 302 247 69 104 chr2 108001503 108001592 -145254991 + MIR SINE MIR 129 220 -42 3100 158 8 0 chr2 108001904 108002392 -145254191 - L1MB3 LINE L1 -7 6176 5685 675 298 38 23 chr2 108003009 108003324 -145253259 + MLT1G LTR MaLR 15 290 -300 379 221 19 123 chr2 108003390 108003544 -145253039 + MLT1G LTR MaLR 425 562 -5 217 333 59 85 chr2 108003544 108003697 -145252886 - L2 LINE L2 -26 3246 3098 1022 87 23 12 chr2 108005804 108005977 -145250606 + (TTTC)n Simple_repeat Simple_repeat 1 175 0 240 35 0 0 chr2 108005979 108006008 -145250575 + (TCCC)n Simple_repeat Simple_repeat 4 32 0 842 146 0 32 chr2 108006028 108006213 -145250370 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 568 197 24 31 chr2 108006361 108006488 -145250095 + FLAM_C SINE Alu 1 126 -7 923 229 16 5 chr2 108006608 108006800 -145249783 - L1PB4 LINE L1 -2 6154 5961 24 0 0 0 chr2 108007333 108007357 -145249226 + AT_rich Low_complexity Low_complexity 1 24 0 449 241 105 8 chr2 108010423 108010556 -145246027 - MER103 DNA DNA -11 155 10 265 215 15 15 chr2 108011719 108011784 -145244799 + GA-rich Low_complexity Low_complexity 1 65 0 353 349 196 18 chr2 108012439 108012780 -145243803 + L2 LINE L2 2870 3271 -1 213 348 0 0 chr2 108013155 108013224 -145243359 + CT-rich Low_complexity Low_complexity 4 72 0 252 282 68 29 chr2 108013969 108014072 -145242511 - L2 LINE L2 -8 3305 3199 2254 100 3 0 chr2 108014232 108014521 -145242062 + AluY SINE Alu 13 302 -9 349 234 13 13 chr2 108014598 108014675 -145241908 - L2 LINE L2 -5 3308 3232 197 33 33 0 chr2 108014702 108014732 -145241851 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 1731 79 39 0 chr2 108014732 108014961 -145241622 - L1PA4 LINE L1 -10 6145 5908 2706 152 7 27 chr2 108014986 108015427 -145241156 + Tigger2a DNA MER2_type 2 433 -1 339 237 0 0 chr2 108015434 108015527 -145241056 + (TA)n Simple_repeat Simple_repeat 2 94 0 386 316 108 33 chr2 108015577 108016006 -145240577 - L2 LINE L2 -165 3148 2669 208 326 96 7 chr2 108016207 108016342 -145240241 + L3 LINE CR1 1428 1574 -3 849 293 87 6 chr2 108016469 108016824 -145239759 + LTR16A LTR ERVL 56 439 -11 2357 100 0 0 chr2 108016850 108017161 -145239422 + AluY SINE Alu 1 311 0 182 296 19 0 chr2 108017336 108017390 -145239193 + L2 LINE L2 3209 3263 -9 807 245 74 28 chr2 108018157 108018373 -145238210 + MIR SINE MIR 13 238 -24 206 207 108 135 chr2 108018568 108018679 -145237904 + MIR SINE MIR 66 173 -89 2327 103 7 0 chr2 108018739 108019049 -145237534 + AluSx SINE Alu 1 312 0 192 40 0 0 chr2 108025323 108025348 -145231235 + (T)n Simple_repeat Simple_repeat 1 25 0 193 273 68 57 chr2 108026797 108026885 -145229698 - MIR SINE MIR -130 132 44 805 216 77 0 chr2 108029918 108030112 -145226471 - MER3 DNA MER1_type 0 209 1 2892 122 25 31 chr2 108030815 108031325 -145225258 - L1MA6 LINE L1 0 6300 5794 624 297 151 0 chr2 108031372 108031591 -145224992 - MIR SINE MIR -1 261 10 1667 201 7 0 chr2 108032234 108032543 -145224040 + AluJb SINE Alu 1 311 -1 385 34 34 0 chr2 108032883 108032942 -145223641 + (TCTA)n Simple_repeat Simple_repeat 3 63 0 344 268 18 6 chr2 108032942 108033106 -145223477 + (TA)n Simple_repeat Simple_repeat 2 167 0 293 309 13 34 chr2 108033112 108033261 -145223322 + L1MEd LINE L1 1090 1235 -4884 300 300 165 39 chr2 108033897 108033983 -145222600 + L1MEd LINE L1 2096 2170 -3959 2122 118 0 3 chr2 108033983 108034279 -145222304 - AluSx SINE Alu -17 295 1 300 300 165 39 chr2 108034279 108034452 -145222131 + L1MEd LINE L1 2170 2388 -3741 22 56 0 0 chr2 108036071 108036107 -145220476 + AT_rich Low_complexity Low_complexity 1 36 0 561 255 55 7 chr2 108037169 108037314 -145219269 - L2 LINE L2 -4 3309 3158 4291 180 30 22 chr2 108037317 108038453 -145218130 - L1MB8 LINE L1 -80 6098 4961 1912 293 109 20 chr2 108038583 108039687 -145216896 - L2 LINE L2 -75 3238 2036 613 336 79 45 chr2 108039768 108040344 -145216239 - L2 LINE L2 -10 3303 2711 1122 158 0 30 chr2 108040393 108040595 -145215988 - AluJo SINE Alu -30 282 87 348 312 89 0 chr2 108040601 108040758 -145215825 - L2 LINE L2 -778 2536 2366 1511 173 76 83 chr2 108041421 108041477 -145215106 - MSTB2 LTR MaLR 0 457 402 2246 78 0 3 chr2 108041477 108041783 -145214800 - AluY SINE Alu 0 305 1 1511 173 76 83 chr2 108041783 108042183 -145214400 - MSTB2 LTR MaLR -55 402 3 292 367 53 6 chr2 108044441 108044610 -145211973 + MIR SINE MIR 46 222 -40 206 281 16 0 chr2 108045210 108045274 -145211309 - MIR SINE MIR 0 262 198 1916 183 14 3 chr2 108045333 108045694 -145210889 - MLT1A1 LTR MaLR 0 365 1 718 161 0 0 chr2 108046901 108047038 -145209545 - AluSp/q SINE Alu 0 313 193 4611 145 48 36 chr2 108047167 108048218 -145208365 + L1PA16 LINE L1 5106 6166 0 3542 165 42 7 chr2 108048219 108049163 -145207420 + L1MA8 LINE L1 4905 5892 -399 251 109 0 0 chr2 108049160 108049206 -145207377 + L1MA7 LINE L1 6240 6285 -6 * 346 332 103 22 chr2 108049571 108049794 -145206789 + MIR SINE MIR 19 259 -3 1628 201 39 25 chr2 108050905 108051263 -145205320 + MLT1A1 LTR MaLR 3 365 0 21 0 0 0 chr2 108051923 108051944 -145204639 + AT_rich Low_complexity Low_complexity 1 21 0 2363 160 34 0 chr2 108052229 108052647 -145203936 - Tigger1 DNA MER2_type 0 2418 1987 2040 247 19 22 chr2 108052647 108053057 -145203526 - L1MC3 LINE L1 -1054 6731 6322 1752 189 29 61 chr2 108053057 108053513 -145203070 + LTR47B LTR ERVL 1 441 -2 2040 247 19 22 chr2 108053513 108053685 -145202898 - L1MC3 LINE L1 -1463 6322 6151 * 3448 73 2 7 chr2 108053680 108054254 -145202329 - L1PA7 LINE L1 -662 5492 4921 5304 55 3 0 chr2 108054254 108054920 -145201663 + L1PA7 LINE L1 5481 6151 -3 3126 234 99 19 chr2 108054935 108056451 -145200132 - L1MC3 LINE L1 -743 5403 4516 748 82 0 0 chr2 108056453 108056550 -145200033 - AluY SINE Alu -214 97 1 22 35 0 0 chr2 108056610 108056639 -145199944 + AT_rich Low_complexity Low_complexity 1 29 0 723 255 113 20 chr2 108057618 108057822 -145198761 + MER58A DNA MER1_type 1 223 -1 279 265 44 73 chr2 108059631 108059767 -145196816 + L2 LINE L2 3182 3313 0 182 298 191 24 chr2 108060631 108060715 -145195868 + MIR SINE MIR 18 115 -93 709 208 15 0 chr2 108061550 108061680 -145194903 + FLAM_C SINE Alu 1 132 -11 1287 186 70 34 chr2 108062032 108062214 -145194369 - MER44D DNA MER2_type -1882 609 435 2147 175 25 25 chr2 108062214 108062648 -145193935 - Tigger2a DNA MER2_type 0 434 1 1287 186 70 34 chr2 108062648 108062678 -145193905 - MER44D DNA MER2_type -2056 435 408 252 0 0 0 chr2 108062678 108062706 -145193877 + (TC)n Simple_repeat Simple_repeat 1 28 0 1287 186 70 34 chr2 108062706 108062819 -145193764 - MER44D DNA MER2_type -2083 408 1 216 289 184 0 chr2 108062870 108062946 -145193637 + MIR SINE MIR 34 123 -85 1665 256 88 42 chr2 108063116 108063705 -145192878 - MLT1E3 LTR MaLR -8 616 1 21 0 0 0 chr2 108065053 108065074 -145191509 + AT_rich Low_complexity Low_complexity 1 21 0 280 382 8 8 chr2 108065223 108065346 -145191237 + MIR SINE MIR 32 154 -108 31 44 0 0 chr2 108065346 108065391 -145191192 + AT_rich Low_complexity Low_complexity 1 45 0 1931 174 3 0 chr2 108065881 108066192 -145190391 + AluSx SINE Alu 1 312 0 1582 229 36 9 chr2 108066284 108066670 -145189913 + MLT2B2 LTR ERVL 1 414 0 27 49 0 0 chr2 108066987 108067028 -145189555 + AT_rich Low_complexity Low_complexity 1 41 0 1451 217 0 7 chr2 108067468 108067740 -145188843 + AluJo SINE Alu 7 276 -36 1104 84 17 11 chr2 108067748 108067927 -145188656 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1396 250 73 25 chr2 108067998 108068456 -145188127 + MLT1D LTR MaLR 1 467 0 433 216 49 74 chr2 108068624 108068786 -145187797 - MIR SINE MIR -2 260 103 3206 16 8 5 chr2 108069209 108069587 -145186996 - L1PA3 LINE L1 -4 6151 5773 13278 144 25 38 chr2 108069605 108071876 -145184707 + Tigger1 DNA MER2_type 1 2299 -119 1784 137 14 7 chr2 108071876 108072160 -145184423 + AluSx SINE Alu 1 286 -26 954 63 0 0 chr2 108072160 108072286 -145184297 + (GGAA)n Simple_repeat Simple_repeat 3 128 0 13278 144 25 38 chr2 108072286 108072459 -145184124 + Tigger1 DNA MER2_type 2297 2415 -3 2401 84 0 0 chr2 108072532 108072840 -145183743 - AluY SINE Alu -3 308 1 23 54 0 0 chr2 108073194 108073231 -145183352 + AT_rich Low_complexity Low_complexity 1 37 0 27 29 0 0 chr2 108073994 108074028 -145182555 + AT_rich Low_complexity Low_complexity 1 34 0 306 302 16 0 chr2 108074810 108074939 -145181644 - MER104 DNA Tc2 -46 134 4 1059 238 139 0 chr2 108075668 108075724 -145180859 - LTR52 LTR ERVL -18 403 356 186 43 0 0 chr2 108075724 108075747 -145180836 + (CA)n Simple_repeat Simple_repeat 1 23 0 1059 238 139 0 chr2 108075747 108076014 -145180569 - LTR52 LTR ERVL -65 356 35 180 77 0 0 chr2 108076014 108076040 -145180543 + (CAA)n Simple_repeat Simple_repeat 2 27 0 508 285 75 81 chr2 108076065 108076437 -145180146 + MLT1J LTR MaLR 142 511 0 1354 227 7 97 chr2 108078167 108078489 -145178094 - MLT1D LTR MaLR -2 503 232 1359 181 67 11 chr2 108078489 108078759 -145177824 - AluJo SINE Alu -27 285 1 1354 227 7 97 chr2 108078759 108078890 -145177693 - MLT1D LTR MaLR -273 232 91 303 224 60 0 chr2 108079071 108079138 -145177445 - MLT1D LTR MaLR -434 71 1 27 0 0 0 chr2 108079567 108079594 -145176989 + AT_rich Low_complexity Low_complexity 1 27 0 2261 108 0 7 chr2 108080000 108080306 -145176277 - AluSg SINE Alu -6 304 1 2420 57 3 0 chr2 108080677 108080976 -145175607 + AluY SINE Alu 1 300 -11 276 170 0 0 chr2 108081341 108081388 -145175195 + MLT1J LTR MaLR 412 458 -53 31 58 0 0 chr2 108081492 108081544 -145175039 + AT_rich Low_complexity Low_complexity 1 52 0 1725 174 51 11 chr2 108082698 108083071 -145173512 - L1MA4 LINE L1 -6 6294 5907 2566 139 21 9 chr2 108083071 108083600 -145172983 + L1M1 LINE L1 5177 5704 -596 22 0 0 0 chr2 108083895 108083917 -145172666 + AT_rich Low_complexity Low_complexity 1 22 0 686 208 91 0 chr2 108083985 108084139 -145172444 + FAM SINE Alu 1 168 -7 1128 132 4 62 chr2 108084435 108084678 -145171905 - L1MA8 LINE L1 -10 6281 6053 259 175 206 0 chr2 108085465 108085528 -145171055 + L2 LINE L2 3238 3313 0 249 270 14 40 chr2 108085540 108085614 -145170969 + MIR SINE MIR 23 94 -168 617 211 113 5 chr2 108087320 108087505 -145169078 + L1M4 LINE L1 4472 4676 -1470 180 0 0 0 chr2 108087510 108087530 -145169053 + (ATG)n Simple_repeat Simple_repeat 2 21 0 2065 137 3 0 chr2 108087828 108088120 -145168463 + AluSx SINE Alu 5 297 -15 198 103 0 0 chr2 108088124 108088153 -145168430 + (TA)n Simple_repeat Simple_repeat 1 29 0 225 256 25 50 chr2 108089553 108089674 -145166909 + (TATATG)n Simple_repeat Simple_repeat 3 120 0 * 439 295 23 0 chr2 108089633 108089859 -145166724 + (TA)n Simple_repeat Simple_repeat 1 231 0 234 190 35 17 chr2 108089864 108089922 -145166661 - L1MCa LINE L1 -4362 2064 2006 233 266 0 43 chr2 108089968 108090062 -145166521 + L1MC4 LINE L1 6614 6703 -1339 369 289 16 0 chr2 108090065 108090186 -145166397 + (TA)n Simple_repeat Simple_repeat 1 123 0 21 36 0 0 chr2 108092625 108092653 -145163930 + AT_rich Low_complexity Low_complexity 1 28 0 2464 148 16 12 chr2 108092848 108093274 -145163309 - MSTA LTR MaLR 0 428 1 2120 108 40 0 chr2 108093681 108093978 -145162605 - AluSg SINE Alu -1 309 1 788 178 0 0 chr2 108093983 108094112 -145162471 - FLAM_C SINE Alu -4 129 1 327 226 88 29 chr2 108094327 108094429 -145162154 + HAL1 LINE L1 1592 1699 -808 229 290 0 0 chr2 108094474 108094536 -145162047 + HAL1 LINE L1 1801 1862 -645 1327 137 3 78 chr2 108094639 108095028 -145161555 + L1MA4 LINE L1 6016 6381 0 243 248 30 20 chr2 108095057 108095158 -145161425 + HAL1 LINE L1 2078 2179 -328 849 242 152 23 chr2 108095400 108095796 -145160787 - LTR16A1 LTR ERVL -7 450 4 259 348 210 23 chr2 108096117 108096465 -145160118 + L3 LINE CR1 1149 1561 -16 1854 121 7 11 chr2 108096620 108096901 -145159682 + AluSg SINE Alu 9 288 -22 218 299 84 9 chr2 108096959 108097066 -145159517 - L2 LINE L2 -6 3307 3193 21 0 0 0 chr2 108097168 108097189 -145159394 + AT_rich Low_complexity Low_complexity 1 21 0 2783 158 21 10 chr2 108098888 108099370 -145157213 - LTR45B LTR ERV1 0 489 3 499 309 52 5 chr2 108099818 108100012 -145156571 + MIR SINE MIR 49 251 -11 260 340 40 0 chr2 108100605 108100705 -145155878 + MER5A DNA MER1_type 9 112 -77 2031 136 131 11 chr2 108101104 108101486 -145155097 + MSTA LTR MaLR 1 428 0 513 221 46 0 chr2 108102113 108102244 -145154339 + MER45 DNA AcHobo 1422 1558 -23 232 288 38 76 chr2 108102588 108102720 -145153863 - MER94 DNA DNA -4 130 4 785 154 7 22 chr2 108103618 108103754 -145152829 - AluJo SINE Alu -178 134 1 718 215 92 129 chr2 108103992 108104617 -145151966 - Charlie2 DNA MER1_type -146 2716 2131 1562 204 4 0 chr2 108104617 108104935 -145151648 - AluJb SINE Alu 0 319 1 718 215 92 129 chr2 108104935 108105196 -145151387 - Charlie2 DNA MER1_type -731 2131 1862 381 259 26 17 chr2 108105286 108105402 -145151181 - Charlie2 DNA MER1_type -2670 192 76 206 193 0 60 chr2 108105537 108105620 -145150963 + (TAAA)n Simple_repeat Simple_repeat 1 78 0 345 322 8 0 chr2 108106013 108106131 -145150452 + MER63 DNA MER1_type 670 788 -273 207 100 0 0 chr2 108106660 108106690 -145149893 + (A)n Simple_repeat Simple_repeat 1 30 0 1139 246 48 0 chr2 108107153 108107401 -145149182 - MLT1E LTR MaLR 0 593 334 1797 128 34 24 chr2 108107527 108107823 -145148760 + AluSp SINE Alu 1 299 -14 257 304 43 16 chr2 108107929 108108113 -145148470 + L1MEc LINE L1 1251 1439 -4957 11661 28 20 0 chr2 108108425 108110560 -145146023 + L1PA4 LINE L1 4000 6153 -2 2160 82 14 0 chr2 108110674 108110997 -145145586 - AluSp SINE Alu 0 327 1 363 291 66 18 chr2 108111216 108111579 -145145004 + L1MEc LINE L1 2122 2472 -3743 1062 291 57 44 chr2 108111738 108112400 -145144183 + L1MEc LINE L1 3634 4304 -1911 21 0 0 0 chr2 108112542 108112563 -145144020 + AT_rich Low_complexity Low_complexity 1 21 0 1735 260 38 103 chr2 108112589 108113982 -145142601 + L1MD3 LINE L1 -135 1184 -4852 454 126 48 0 chr2 108113991 108114094 -145142489 + (TA)n Simple_repeat Simple_repeat 1 108 0 364 235 78 40 chr2 108114145 108114275 -145142308 + L1MD3 LINE L1 1290 1571 -4855 1748 182 3 10 chr2 108114446 108114743 -145141840 - AluJo SINE Alu -17 295 1 748 258 61 9 chr2 108114748 108115047 -145141536 + L1MD3 LINE L1 1682 1910 -4516 23 33 0 0 chr2 108115050 108115080 -145141503 + AT_rich Low_complexity Low_complexity 1 30 0 1552 116 98 14 chr2 108115084 108115361 -145141222 - L1PA10 LINE L1 -4 6164 5865 15099 193 36 32 chr2 108115364 108116168 -145140415 - L1P3 LINE L1 -2145 4316 3517 2306 78 7 7 chr2 108116168 108116463 -145140120 + AluY SINE Alu 1 295 -16 15099 193 36 32 chr2 108116463 108117429 -145139154 - L1P3 LINE L1 -2944 3517 2557 2783 9 0 31 chr2 108117429 108117755 -145138828 - AluYb8 SINE Alu -2 316 1 15099 193 36 32 chr2 108117755 108120225 -145136358 - L1P3 LINE L1 -3904 2557 10 2283 230 90 23 chr2 108120236 108121621 -145134962 + L1MD3 LINE L1 1934 3415 -3011 351 137 77 34 chr2 108121617 108121740 -145134843 + L1M4 LINE L1 4951 5073 -1073 * 293 252 39 10 chr2 108121815 108121918 -145134665 - L1M4 LINE L1 -1426 4720 4615 * 1853 247 84 16 chr2 108121913 108122810 -145133773 + L1MD3 LINE L1 4787 5745 -701 1067 215 130 79 chr2 108122856 108123186 -145133397 - MLT1B LTR MaLR -3 387 41 3051 184 35 5 chr2 108123202 108123854 -145132729 - L1PB4 LINE L1 -3 6153 5482 516 167 31 0 chr2 108124038 108124134 -145132449 - L1P5 LINE L1 -576 5580 5482 2762 238 160 63 chr2 108124164 108124937 -145131646 + L1MD3 LINE L1 5787 6484 -1791 321 93 0 0 chr2 108124937 108124991 -145131592 + (TAGA)n Simple_repeat Simple_repeat 2 55 0 2762 238 160 63 chr2 108124991 108125830 -145130753 + L1MD3 LINE L1 6484 7555 -720 412 270 8 16 chr2 108125833 108125959 -145130624 + MLT1F1 LTR MaLR 1 125 -442 608 241 8 0 chr2 108125959 108126092 -145130491 + L1MD3 LINE L1 7684 7817 -458 337 310 14 0 chr2 108126267 108126409 -145130174 - L1ME3A LINE L1 0 6170 6027 462 131 0 0 chr2 108126409 108126508 -145130075 + (TA)n Simple_repeat Simple_repeat 1 99 0 334 303 21 14 chr2 108126533 108126678 -145129905 - L1ME3A LINE L1 -174 5988 5843 641 309 119 67 chr2 108126774 108127291 -145129292 + L1MC5 LINE L1 4325 4814 -1332 1632 188 3 0 chr2 108127291 108127583 -145129000 + AluJb SINE Alu 13 305 -7 641 309 119 67 chr2 108127583 108127863 -145128720 + L1MC5 LINE L1 4814 5173 -973 1114 203 161 23 chr2 108127863 108128124 -145128459 - AluJo SINE Alu -5 297 1 641 309 119 67 chr2 108128124 108128201 -145128382 + L1MC5 LINE L1 5173 5245 -901 943 269 98 25 chr2 108128316 108128763 -145127820 + L1MC5 LINE L1 5355 5834 -1974 26 64 0 0 chr2 108128764 108128811 -145127772 + AT_rich Low_complexity Low_complexity 1 47 0 35 24 0 0 chr2 108129054 108129096 -145127487 + AT_rich Low_complexity Low_complexity 1 42 0 2125 98 0 14 chr2 108129097 108129444 -145127139 - AluSg SINE Alu 0 343 1 25 31 0 0 chr2 108129545 108129577 -145127006 + AT_rich Low_complexity Low_complexity 1 32 0 1343 237 95 106 chr2 108129930 108130877 -145125706 + L1MC5 LINE L1 6546 7482 -479 8541 145 15 20 chr2 108130877 108133195 -145123388 - L1PA10 LINE L1 -5 6163 3846 1343 237 95 106 chr2 108133195 108133627 -145122956 + L1MC5 LINE L1 7482 7917 -44 9628 183 29 24 chr2 108133713 108136935 -145119648 - L1MA4A LINE L1 -24 6981 3740 16552 232 34 20 chr2 108136937 108143421 -145113162 + L1PA13 LINE L1 1 7097 -502 1894 194 42 34 chr2 108143421 108143961 -145112622 + MLT2A2 LTR ERVL 1 546 -8 3296 123 4 4 chr2 108143964 108144470 -145112113 + L1PA13 LINE L1 7092 7597 -4 3048 236 13 18 chr2 108144495 108145498 -145111085 - L1MA4A LINE L1 -3103 3745 2750 2230 134 100 13 chr2 108145502 108145891 -145110692 + MSTA LTR MaLR 6 428 0 2320 191 47 19 chr2 108145891 108146420 -145110163 - L1MA4A LINE L1 -4115 2734 2191 8654 210 30 13 chr2 108146432 108148173 -145108410 - L1PA15 LINE L1 -2 6814 4990 207 100 0 0 chr2 108148173 108148203 -145108380 + (TG)n Simple_repeat Simple_repeat 2 31 0 8654 210 30 13 chr2 108148203 108149528 -145107055 - L1PA15 LINE L1 -1826 4990 3690 5978 107 8 15 chr2 108149534 108150896 -145105687 - L1PA10 LINE L1 -3 6165 4800 7298 146 15 4 chr2 108150899 108151027 -145105556 + L1P LINE L1 3561 3686 -2460 822 40 16 24 chr2 108151027 108151151 -145105432 + (GAAA)n Simple_repeat Simple_repeat 2 124 0 7298 146 15 4 chr2 108151151 108152252 -145104331 + L1P LINE L1 3686 4804 -1342 4250 265 45 11 chr2 108152250 108154555 -145102028 - L1PA15 LINE L1 -3103 3694 1293 * 3212 259 7 27 chr2 108154655 108155422 -145101161 - L1PA15 LINE L1 -6036 751 1 10281 216 16 17 chr2 108155427 108157506 -145099077 - L1M2 LINE L1 -4652 2197 121 249 329 14 0 chr2 108157882 108157955 -145098628 + L2 LINE L2 2959 3032 -240 306 317 87 25 chr2 108158160 108158321 -145098262 + MIR SINE MIR 74 244 -18 729 249 33 0 chr2 108162125 108162306 -145094277 + MER105 DNA DNA 14 200 -4 372 231 165 80 chr2 108162476 108162688 -145093895 + LTR33 LTR ERVL 3 232 -289 213 65 0 0 chr2 108163922 108163953 -145092630 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 383 372 39 26 chr2 108165405 108165639 -145090944 - MIR SINE MIR 0 262 26 228 338 26 0 chr2 108165706 108165783 -145090800 - MIR SINE MIR -64 144 66 290 304 11 0 chr2 108167098 108167190 -145089393 - LTR33 LTR ERVL -58 463 371 2070 233 77 104 chr2 108167201 108167867 -145088716 + MER21B LTR ERV1 12 653 -210 2639 23 0 3 chr2 108167867 108168175 -145088408 - L1PA3 LINE L1 -3 6152 5846 2070 233 77 104 chr2 108168175 108168328 -145088255 + MER21B LTR ERV1 653 809 -54 233 105 53 0 chr2 108168754 108168792 -145087791 + Tigger5 DNA MER2_type 307 346 -1977 24 53 0 0 chr2 108170014 108170052 -145086531 + AT_rich Low_complexity Low_complexity 1 38 0 27 0 0 0 chr2 108171221 108171248 -145085335 + AT_rich Low_complexity Low_complexity 1 27 0 23 0 0 0 chr2 108172089 108172112 -145084471 + AT_rich Low_complexity Low_complexity 1 23 0 600 300 54 35 chr2 108172247 108172507 -145084076 - L2 LINE L2 -43 3270 3006 250 284 71 64 chr2 108172552 108172693 -145083890 - L2 LINE L2 -514 2800 2659 488 233 128 23 chr2 108172701 108172920 -145083663 + MER33 DNA MER1_type 2 243 -81 401 135 83 0 chr2 108173154 108173250 -145083333 + MER33 DNA MER1_type 230 333 -30 1286 266 24 6 chr2 108173254 108174062 -145082521 + L1MDb LINE L1 11 1004 -5405 1053 221 6 3 chr2 108174059 108174380 -145082203 - L1M4b LINE L1 -6012 847 351 * 568 217 9 0 chr2 108174440 108174555 -145082028 + L1MDb LINE L1 1006 1121 -5288 1238 207 18 42 chr2 108174568 108174853 -145081730 + L1MD2 LINE L1 6009 6286 -73 2013 105 48 0 chr2 108175640 108175935 -145080648 + AluSc SINE Alu 1 309 0 3882 238 45 39 chr2 108175968 108177992 -145078591 + L1M4b LINE L1 5 2257 -4702 195 42 0 0 chr2 108177992 108178016 -145078567 + (TAA)n Simple_repeat Simple_repeat 1 24 0 3882 238 45 39 chr2 108178016 108178153 -145078430 + L1M4b LINE L1 2257 2392 -4567 500 267 53 0 chr2 108178641 108178942 -145077641 + L1M4b LINE L1 2784 3102 -3855 699 245 93 45 chr2 108178947 108179227 -145077356 - MLT1D LTR MaLR 0 505 207 1987 145 0 0 chr2 108179227 108179509 -145077074 + AluSx SINE Alu 1 282 -30 699 245 93 45 chr2 108179509 108179538 -145077045 - MLT1D LTR MaLR -298 207 181 22 0 0 0 chr2 108179559 108179581 -145077002 + AT_rich Low_complexity Low_complexity 1 22 0 681 272 16 11 chr2 108179581 108179772 -145076811 - MLT1D LTR MaLR -311 194 3 875 264 45 120 chr2 108179788 108180280 -145076303 - MLT1D-int LTR MaLR -24 1347 893 180 0 0 0 chr2 108180303 108180323 -145076260 + (TTTC)n Simple_repeat Simple_repeat 4 23 0 3050 236 26 55 chr2 108180410 108181319 -145075264 - MLT1D-int LTR MaLR -487 884 2 1051 266 96 37 chr2 108181320 108181756 -145074827 - MLT1D LTR MaLR 0 505 44 3690 230 55 69 chr2 108181802 108183361 -145073222 + L1M4b LINE L1 3122 4658 -2299 342 298 79 9 chr2 108183420 108183534 -145073049 + L2 LINE L2 3191 3312 -1 21 0 0 0 chr2 108184007 108184028 -145072555 + AT_rich Low_complexity Low_complexity 1 21 0 1399 154 0 18 chr2 108184814 108185041 -145071542 + AluSg/x SINE Alu 65 287 -23 23 68 0 0 chr2 108185086 108185130 -145071453 + AT_rich Low_complexity Low_complexity 1 44 0 941 202 0 0 chr2 108185179 108185347 -145071236 + FRAM SINE Alu 1 167 -9 334 284 131 38 chr2 108186424 108186607 -145069976 - MIR SINE MIR -50 212 13 520 277 40 23 chr2 108186953 108187130 -145069453 + MIR SINE MIR 59 238 -24 2487 41 0 0 chr2 108187644 108187939 -145068644 + AluY SINE Alu 1 295 -16 226 122 0 0 chr2 108187939 108187980 -145068603 - LTR66 LTR ERVL -172 438 398 524 113 75 6 chr2 108187990 108188149 -145068434 + (TA)n Simple_repeat Simple_repeat 1 170 0 209 272 25 37 chr2 108189063 108189144 -145067439 + L2 LINE L2 3234 3313 0 53 17 0 0 chr2 108189789 108189849 -145066734 + AT_rich Low_complexity Low_complexity 1 60 0 189 0 0 0 chr2 108190257 108190278 -145066305 + (TA)n Simple_repeat Simple_repeat 2 22 0 332 320 83 6 chr2 108190824 108190980 -145065603 + MIR SINE MIR 79 246 -16 2346 66 0 7 chr2 108191924 108192226 -145064357 + AluY SINE Alu 1 300 -11 388 315 36 54 chr2 108192904 108193057 -145063526 - LTR16C LTR ERVL -2 489 340 4017 107 12 0 chr2 108193057 108193647 -145062936 + L1PA14 LINE L1 5564 6160 -1 388 315 36 54 chr2 108193647 108193715 -145062868 - LTR16C LTR ERVL -151 340 272 189 0 0 0 chr2 108195939 108195960 -145060623 + (TG)n Simple_repeat Simple_repeat 2 22 0 1922 94 97 62 chr2 108196232 108196584 -145059999 + THE1B LTR MaLR 1 364 0 21 36 0 0 chr2 108197238 108197266 -145059317 + AT_rich Low_complexity Low_complexity 1 28 0 1589 217 50 9 chr2 108197304 108197645 -145058938 + MLT1A1 LTR MaLR 11 365 0 3410 248 82 68 chr2 108197649 108198989 -145057594 + MLT1A1-int LTR MaLR 5 1363 -8 1788 191 11 27 chr2 108198996 108199367 -145057216 + MLT1A1 LTR MaLR 1 365 0 2063 235 67 30 chr2 108199403 108200059 -145056524 + L1MD3 LINE L1 7314 7993 -2 277 316 104 10 chr2 108200402 108200595 -145055988 + HAL1 LINE L1 1530 1740 -767 688 137 72 7 chr2 108200742 108200895 -145055688 + L1MA8 LINE L1 6125 6287 -4 220 271 174 27 chr2 108201638 108201777 -145054806 - MIR SINE MIR -65 143 1 22 21 0 62 chr2 108202417 108202465 -145054118 + AT_rich Low_complexity Low_complexity 1 45 0 228 359 166 11 chr2 108202623 108202804 -145053779 - L2 LINE L2 -25 3247 3039 285 29 0 0 chr2 108203171 108203205 -145053378 + (TG)n Simple_repeat Simple_repeat 2 35 0 393 296 206 39 chr2 108203615 108203950 -145052633 - L2 LINE L2 -106 3207 2817 329 307 70 0 chr2 108204152 108204273 -145052310 + MIR SINE MIR 56 183 -63 266 283 32 88 chr2 108204361 108204644 -145051939 - L2 LINE L2 -1504 1810 1544 591 268 43 6 chr2 108205036 108205200 -145051383 + MER5A DNA MER1_type 2 171 -18 22 35 0 0 chr2 108206774 108206803 -145049780 + AT_rich Low_complexity Low_complexity 1 29 0 378 74 0 0 chr2 108207452 108207506 -145049077 + (TG)n Simple_repeat Simple_repeat 1 54 0 520 336 147 26 chr2 108208487 108208903 -145047680 + L3 LINE CR1 400 865 -712 26 64 0 0 chr2 108212098 108212145 -145044438 + AT_rich Low_complexity Low_complexity 1 47 0 5452 118 25 2 chr2 108212500 108213339 -145043244 + L1MA3 LINE L1 5448 6305 0 2678 217 13 7 chr2 108213345 108213894 -145042689 - MER74A LTR ERVL -6 552 1 320 306 155 26 chr2 108214069 108214262 -145042321 + MIR SINE MIR 31 248 -14 2593 125 2 20 chr2 108214492 108214657 -145041926 + L1PA10 LINE L1 5381 5547 -621 2236 137 31 14 chr2 108214657 108215015 -145041568 - THE1B LTR MaLR 0 364 1 9760 110 43 27 chr2 108215015 108216292 -145040291 - THE1B-int LTR MaLR 0 1580 272 2014 122 0 0 chr2 108216292 108216570 -145040013 + AluSx SINE Alu 5 282 -30 9760 110 43 27 chr2 108216570 108216847 -145039736 - THE1B-int LTR MaLR -1308 272 1 1776 162 93 3 chr2 108216847 108217181 -145039402 - THE1B LTR MaLR 0 364 1 2593 125 2 20 chr2 108217181 108217421 -145039162 + L1PA10 LINE L1 5544 5781 -387 232 116 0 0 chr2 108217421 108217464 -145039119 - LTR66 LTR ERVL -174 436 394 2585 100 10 18 chr2 108217477 108217866 -145038717 + L1PA10 LINE L1 5782 6167 -1 28 91 0 0 chr2 108218154 108218231 -145038352 + AT_rich Low_complexity Low_complexity 1 77 0 234 151 12 116 chr2 108219174 108219260 -145037323 + MLT1J2 LTR MaLR 363 439 -11 207 0 0 0 chr2 108219491 108219514 -145037069 + (A)n Simple_repeat Simple_repeat 1 23 0 552 291 166 36 chr2 108219645 108220750 -145035833 - L1MEc LINE L1 -2579 3803 2555 255 267 70 70 chr2 108220852 108221025 -145035558 - L1MEc LINE L1 -4079 2484 2309 2009 128 0 0 chr2 108221025 108221036 -145035547 - AluSx SINE Alu -15 297 287 183 42 0 0 chr2 108221036 108221060 -145035523 + (GTTTG)n Simple_repeat Simple_repeat 2 25 0 2009 128 0 0 chr2 108221060 108221345 -145035238 - AluSx SINE Alu -24 288 1 255 267 70 70 chr2 108221345 108221512 -145035071 - L1MEc LINE L1 -4253 2310 2144 358 307 33 16 chr2 108221633 108221827 -145034756 - L1MEc LINE L1 -4478 1904 1697 380 275 217 59 chr2 108221843 108222502 -145034081 - L1MEc LINE L1 -4854 1530 768 2090 146 33 28 chr2 108223440 108223802 -145032781 + THE1B LTR MaLR 1 364 0 1599 240 149 29 chr2 108224070 108224625 -145031958 + MLT1E2 LTR MaLR 1 622 -4 284 258 0 0 chr2 108224746 108224808 -145031775 - MLT1B LTR MaLR -85 305 244 475 206 83 72 chr2 108225333 108225513 -145031070 + MLT1B LTR MaLR 58 239 -151 2270 99 0 7 chr2 108226824 108227118 -145029465 + AluSx SINE Alu 1 292 -20 1400 68 0 16 chr2 108227675 108227865 -145028718 - AluY SINE Alu -9 302 116 983 268 93 15 chr2 108229148 108229753 -145026830 + L1M4 LINE L1 2806 3457 -2689 3398 92 10 16 chr2 108229756 108230244 -145026339 - L1PA13 LINE L1 -7 6156 5672 23 0 0 0 chr2 108230479 108230502 -145026081 + AT_rich Low_complexity Low_complexity 1 23 0 1550 200 0 55 chr2 108230552 108230877 -145025706 + AluJo SINE Alu 1 307 -5 1906 181 23 65 chr2 108231294 108231726 -145024857 - MLT2D LTR ERVL 0 414 1 808 273 157 30 chr2 108231726 108232133 -145024450 - MLT1H LTR MaLR -3 546 88 1919 106 133 26 chr2 108232469 108232808 -145023775 + THE1C LTR MaLR 1 375 0 2108 146 118 5 chr2 108233059 108233442 -145023141 + MSTA LTR MaLR 3 428 0 25 0 0 0 chr2 108234240 108234265 -145022318 + AT_rich Low_complexity Low_complexity 1 25 0 279 248 175 7 chr2 108235233 108235370 -145021213 - MER103 DNA DNA -2 164 5 843 130 19 71 chr2 108235371 108235525 -145021058 + FRAM SINE Alu 1 146 -30 304 258 47 23 chr2 108235886 108236014 -145020569 - Charlie8 DNA MER1_type -2213 204 74 218 143 20 0 chr2 108236783 108236832 -145019751 + (CA)n Simple_repeat Simple_repeat 1 50 0 23 0 0 0 chr2 108237171 108237194 -145019389 + AT_rich Low_complexity Low_complexity 1 23 0 203 0 37 0 chr2 108237486 108237513 -145019070 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 23 68 0 0 chr2 108240755 108240799 -145015784 + AT_rich Low_complexity Low_complexity 1 44 0 1710 149 0 62 chr2 108242547 108242856 -145013727 + AluSx SINE Alu 1 290 -22 204 132 26 0 chr2 108242981 108243019 -145013564 + (CA)n Simple_repeat Simple_repeat 2 40 0 284 120 20 0 chr2 108243022 108243072 -145013511 + GA-rich Low_complexity Low_complexity 2 52 0 747 254 28 28 chr2 108243298 108243511 -145013072 - MIR SINE MIR -48 214 2 257 333 0 12 chr2 108243530 108243614 -145012969 + L3 LINE CR1 1155 1237 -340 1039 302 88 38 chr2 108245026 108245518 -145011065 + HAL1 LINE L1 339 890 -1617 2353 64 34 0 chr2 108245518 108245814 -145010769 + AluY SINE Alu 1 306 -5 1039 302 88 38 chr2 108245814 108246142 -145010441 + HAL1 LINE L1 890 1200 -1307 1296 289 68 46 chr2 108246161 108247111 -145009472 + HAL1 LINE L1 1247 2217 -290 285 200 18 0 chr2 108248140 108248195 -145008388 - MLT1K LTR MaLR -16 572 517 21 57 0 0 chr2 108248670 108248705 -145007878 + AT_rich Low_complexity Low_complexity 1 35 0 13762 226 27 20 chr2 108248829 108249463 -145007120 - L1PA16 LINE L1 -47 7557 6929 201 74 0 0 chr2 108249463 108249490 -145007093 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 13762 226 27 20 chr2 108249490 108250539 -145006044 - L1PA16 LINE L1 -675 6929 5889 282 73 0 0 chr2 108250539 108250580 -145006003 + (TG)n Simple_repeat Simple_repeat 2 42 0 13762 226 27 20 chr2 108250580 108254128 -145002455 - L1PA16 LINE L1 -1715 5889 2261 246 32 0 0 chr2 108254164 108254195 -145002388 + (T)n Simple_repeat Simple_repeat 1 31 0 678 351 40 8 chr2 108255144 108255540 -145001043 - L1PA16 LINE L1 -7166 415 7 1415 181 118 18 chr2 108257690 108258022 -144998561 - MLT1A1 LTR MaLR 0 365 1 710 75 0 38 chr2 108258142 108258248 -144998335 - L1PA8 LINE L1 -5 6167 6066 628 291 42 11 chr2 108258321 108258510 -144998073 - MIR SINE MIR -35 227 33 2434 60 0 25 chr2 108259226 108259544 -144997039 + AluY SINE Alu 1 310 -1 298 329 139 6 chr2 108260307 108260465 -144996118 + MIR SINE MIR 54 232 -30 246 62 0 0 chr2 108260845 108260877 -144995706 + (TG)n Simple_repeat Simple_repeat 2 33 0 203 269 0 0 chr2 108261118 108261170 -144995413 - L2 LINE L2 -4 3309 3258 31 0 0 0 chr2 108261893 108261924 -144994659 + AT_rich Low_complexity Low_complexity 1 31 0 220 192 39 0 chr2 108262719 108262771 -144993812 + (TA)n Simple_repeat Simple_repeat 1 54 0 843 169 8 0 chr2 108262956 108263086 -144993497 + AluSq/x SINE Alu 5 135 -178 453 286 85 35 chr2 108263269 108263649 -144992934 + L1ME LINE L1 5276 5669 -501 1817 167 41 0 chr2 108264486 108264605 -144991978 + AluSx SINE Alu 2 115 -197 234 0 0 0 chr2 108264605 108264631 -144991952 + (TAAAA)n Simple_repeat Simple_repeat 4 29 0 1817 167 41 0 chr2 108264631 108264805 -144991778 + AluSx SINE Alu 115 307 -5 203 313 60 0 chr2 108265399 108265466 -144991117 - L2 LINE L2 -75 3197 3127 181 264 0 0 chr2 108265894 108265947 -144990636 + T-rich Low_complexity Low_complexity 1 53 0 23 0 0 0 chr2 108266220 108266243 -144990340 + AT_rich Low_complexity Low_complexity 1 23 0 2160 106 24 0 chr2 108266422 108266715 -144989868 + AluSx SINE Alu 1 300 -12 191 250 42 0 chr2 108267067 108267115 -144989468 - L2 LINE L2 0 3313 3264 24 0 0 0 chr2 108267212 108267236 -144989347 + AT_rich Low_complexity Low_complexity 1 24 0 463 295 76 9 chr2 108267332 108267542 -144989041 - MIR SINE MIR -2 260 37 1240 172 38 0 chr2 108267601 108267810 -144988773 + AluJo SINE Alu 83 299 -13 24 0 0 0 chr2 108268098 108268122 -144988461 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr2 108269367 108269396 -144987187 + AT_rich Low_complexity Low_complexity 1 29 0 1253 302 80 2 chr2 108269967 108270477 -144986106 - L1ME3 LINE L1 0 6162 5613 338 223 10 48 chr2 108270515 108270618 -144985965 + GA-rich Low_complexity Low_complexity 4 102 0 295 282 53 61 chr2 108270815 108271060 -144985523 + L1MEd LINE L1 606 848 -5271 1268 260 37 23 chr2 108271137 108271668 -144984915 + L1ME1 LINE L1 5527 6074 -90 2005 180 16 73 chr2 108271946 108272108 -144984475 + L1MC1 LINE L1 5169 5339 -994 5551 121 36 0 chr2 108272108 108273021 -144983562 + L1PA13 LINE L1 5206 6149 -14 2005 180 16 73 chr2 108273021 108273837 -144982746 + L1MC1 LINE L1 5339 6322 -11 26 0 0 0 chr2 108274021 108274047 -144982536 + AT_rich Low_complexity Low_complexity 1 26 0 440 287 56 27 chr2 108275440 108275692 -144980891 - L2 LINE L2 -15 3298 2775 383 272 94 39 chr2 108276373 108276553 -144980030 + MLT1J LTR MaLR 75 264 -247 528 230 8 0 chr2 108276563 108276689 -144979894 + L1PB4 LINE L1 5954 6080 -76 727 142 0 174 chr2 108276727 108276946 -144979637 - L1MA5A LINE L1 -6 6291 6111 26 50 0 0 chr2 108277033 108277073 -144979510 + AT_rich Low_complexity Low_complexity 1 40 0 352 262 87 64 chr2 108277311 108277483 -144979100 + MLT1J LTR MaLR 304 479 -32 299 316 114 50 chr2 108277797 108278158 -144978425 + L3 LINE CR1 1189 1572 -5 2315 94 17 0 chr2 108278279 108278578 -144978005 - AluSx SINE Alu -4 308 5 1584 116 3 58 chr2 108278607 108278899 -144977684 - L1MA5A LINE L1 -6 6291 6016 2947 169 74 11 chr2 108279048 108279427 -144977156 - MER6A DNA MER2_type -260 605 177 264 77 0 0 chr2 108279427 108279466 -144977117 + (CA)n Simple_repeat Simple_repeat 1 39 0 2947 169 74 11 chr2 108279466 108279654 -144976929 - MER6A DNA MER2_type -688 177 2 22 0 0 0 chr2 108281199 108281221 -144975362 + AT_rich Low_complexity Low_complexity 1 22 0 2130 142 0 0 chr2 108282314 108282625 -144973958 - AluSx SINE Alu -1 311 1 225 83 0 0 chr2 108282828 108282864 -144973719 + (CA)n Simple_repeat Simple_repeat 1 36 0 1224 245 96 25 chr2 108283022 108283458 -144973125 - MLT1C LTR MaLR 0 467 1 220 167 320 0 chr2 108284347 108284425 -144972158 - MIR SINE MIR -70 192 90 545 287 85 35 chr2 108284536 108284853 -144971730 + L1ME3 LINE L1 5558 5890 -272 180 0 0 0 chr2 108284934 108284954 -144971629 + (TAAAAA)n Simple_repeat Simple_repeat 2 21 0 24 53 0 0 chr2 108286190 108286228 -144970355 + AT_rich Low_complexity Low_complexity 1 38 0 44 84 0 0 chr2 108286381 108286488 -144970095 + AT_rich Low_complexity Low_complexity 1 107 0 449 299 125 10 chr2 108286574 108286776 -144969807 - MIR SINE MIR -12 250 22 181 104 83 0 chr2 108286776 108286824 -144969759 + (TTATA)n Simple_repeat Simple_repeat 2 53 0 22 70 0 0 chr2 108287110 108287153 -144969430 + AT_rich Low_complexity Low_complexity 1 43 0 334 283 64 64 chr2 108288639 108288872 -144967711 - MIR SINE MIR -12 250 18 827 189 17 6 chr2 108289270 108289450 -144967133 + MER53 DNA DNA 1 182 -7 220 262 33 0 chr2 108290776 108290837 -144965746 + L2 LINE L2 3210 3272 0 456 67 0 0 chr2 108291047 108291107 -144965476 + (TAGA)n Simple_repeat Simple_repeat 2 61 0 638 352 20 4 chr2 108291253 108291500 -144965083 + L2 LINE L2 1933 2183 -1131 592 239 14 7 chr2 108291500 108291641 -144964942 - MER119 DNA MER1_type 0 583 442 1901 236 49 22 chr2 108291641 108292133 -144964450 + MLT1D LTR MaLR 1 505 0 1126 236 134 8 chr2 108292133 108292482 -144964101 - MER119 DNA MER1_type -137 446 54 635 245 140 112 chr2 108292504 108293099 -144963484 + L2 LINE L2 2177 2754 -559 1061 203 28 0 chr2 108293099 108293311 -144963272 + MER20 DNA MER1_type 2 219 0 635 245 140 112 chr2 108293311 108293450 -144963133 + L2 LINE L2 2754 2888 -425 279 0 0 0 chr2 108293450 108293481 -144963102 + (TTTTG)n Simple_repeat Simple_repeat 5 35 0 2237 72 0 0 chr2 108293481 108293760 -144962823 - AluY SINE Alu -32 279 1 635 245 140 112 chr2 108293760 108293885 -144962698 + L2 LINE L2 2887 3069 -244 1221 238 58 25 chr2 108294048 108294410 -144962173 - MLT1A2 LTR MaLR 0 374 1 210 118 0 0 chr2 108294467 108294501 -144962082 + (TG)n Simple_repeat Simple_repeat 1 34 0 682 249 5 49 chr2 108294887 108295072 -144961511 + MIR SINE MIR 37 213 -49 22 0 0 0 chr2 108295308 108295330 -144961253 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 108297273 108297294 -144959289 + GC_rich Low_complexity Low_complexity 1 21 0 43 20 0 0 chr2 108301883 108301933 -144954650 + AT_rich Low_complexity Low_complexity 1 50 0 22 0 0 0 chr2 108303637 108303659 -144952924 + AT_rich Low_complexity Low_complexity 1 22 0 227 319 203 12 chr2 108304956 108305119 -144951464 + L2 LINE L2 2994 3187 -85 236 354 87 19 chr2 108305185 108305346 -144951237 + MIR SINE MIR 57 228 -34 25 0 0 0 chr2 108307788 108307813 -144948770 + AT_rich Low_complexity Low_complexity 1 25 0 237 65 0 0 chr2 108308330 108308361 -144948222 + (TTCA)n Simple_repeat Simple_repeat 2 32 0 1989 178 151 13 chr2 108308670 108309252 -144947331 - MER39 LTR ERV1 0 707 1 295 380 15 0 chr2 108309298 108309435 -144947148 - L2 LINE L2 -480 2834 2696 180 125 0 0 chr2 108309567 108309599 -144946984 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 686 277 103 31 chr2 108309650 108310503 -144946080 + L1ME3A LINE L1 4943 5875 -287 1882 184 56 62 chr2 108310744 108311229 -144945354 - MER31A LTR ERV1 0 485 4 4251 151 36 21 chr2 108311344 108312182 -144944401 + L1MA4A LINE L1 5261 6121 -182 555 151 0 0 chr2 108312186 108312279 -144944304 + L1MA4A LINE L1 6188 6280 -23 212 301 121 0 chr2 108312822 108312905 -144943678 - MIR SINE MIR -10 252 160 2009 176 14 14 chr2 108312910 108313267 -144943316 + MSTC LTR MaLR 1 357 -71 2005 154 0 0 chr2 108313270 108313568 -144943015 - AluSx SINE Alu -4 308 11 50 31 0 0 chr2 108313579 108313643 -144942940 + AT_rich Low_complexity Low_complexity 1 64 0 310 73 0 0 chr2 108313650 108313691 -144942892 + MSTC LTR MaLR 388 428 0 260 229 96 12 chr2 108313697 108313780 -144942803 - MIR SINE MIR -108 154 65 200 255 20 0 chr2 108314015 108314066 -144942517 + L2 LINE L2 3262 3313 0 234 91 0 0 chr2 108315036 108315069 -144941514 + (A)n Simple_repeat Simple_repeat 1 33 0 203 259 35 0 chr2 108315123 108315181 -144941402 + CT-rich Low_complexity Low_complexity 3 62 0 183 271 0 0 chr2 108316283 108316342 -144940241 + (TA)n Simple_repeat Simple_repeat 2 60 0 193 346 106 10 chr2 108317632 108317736 -144938847 + L2 LINE L2 3177 3290 -23 253 333 23 0 chr2 108317820 108317907 -144938676 - L2 LINE L2 0 3272 3184 22 0 0 0 chr2 108317962 108317984 -144938599 + AT_rich Low_complexity Low_complexity 1 22 0 1218 28 0 0 chr2 108318510 108318655 -144937928 + L1PA4 LINE L1 6008 6152 -3 29 47 0 0 chr2 108318818 108318861 -144937722 + AT_rich Low_complexity Low_complexity 1 43 0 180 152 0 0 chr2 108319892 108319925 -144936658 + CT-rich Low_complexity Low_complexity 1 33 0 21 36 0 0 chr2 108321018 108321046 -144935537 + AT_rich Low_complexity Low_complexity 1 28 0 244 258 99 93 chr2 108321078 108321260 -144935323 + MIR SINE MIR 69 251 -11 23 0 0 0 chr2 108322256 108322279 -144934304 + AT_rich Low_complexity Low_complexity 1 23 0 37 23 0 0 chr2 108322321 108322365 -144934218 + AT_rich Low_complexity Low_complexity 1 44 0 642 196 0 0 chr2 108322497 108322604 -144933979 + FRAM SINE Alu 4 110 -66 2011 137 3 0 chr2 108323559 108323865 -144932718 - AluSx SINE Alu -5 307 1 261 314 27 81 chr2 108324123 108324308 -144932275 - HERV16 LTR ERVL -4360 636 462 394 295 104 59 chr2 108324477 108325138 -144931445 - L1MCc LINE L1 -2797 4144 3406 1849 129 30 0 chr2 108325138 108325409 -144931174 - AluSx SINE Alu -23 289 11 394 295 104 59 chr2 108325409 108325917 -144930666 - L1MCc LINE L1 -3535 3406 2922 287 253 161 5 chr2 108326296 108326482 -144930101 - L1MCc LINE L1 -4444 2497 2283 384 264 99 92 chr2 108326482 108326766 -144929817 - L1MCc LINE L1 -4905 2026 1741 1608 242 116 33 chr2 108326766 108327344 -144929239 - MLT1E2 LTR MaLR 0 626 1 269 214 58 17 chr2 108327408 108327580 -144929003 - L1MCc LINE L1 -4955 1468 1304 23 0 0 0 chr2 108327643 108327666 -144928917 + AT_rich Low_complexity Low_complexity 1 23 0 2288 260 67 16 chr2 108328123 108329342 -144927241 - L1ME1 LINE L1 -5 6161 4891 230 89 22 0 chr2 108329569 108329614 -144926969 + LTR66 LTR ERVL 394 439 -171 1022 221 38 59 chr2 108329621 108329855 -144926728 - L1ME1 LINE L1 -1300 4846 4624 1502 184 42 24 chr2 108329855 108330143 -144926440 + AluJo SINE Alu 5 297 -15 1022 221 38 59 chr2 108330143 108330333 -144926250 - L1ME1 LINE L1 -1522 4624 4431 503 332 73 18 chr2 108330333 108330607 -144925976 + L2 LINE L2 3024 3312 -1 228 241 19 0 chr2 108331100 108331154 -144925429 + (CA)n Simple_repeat Simple_repeat 2 56 0 27 73 0 0 chr2 108331319 108331374 -144925209 + AT_rich Low_complexity Low_complexity 1 55 0 5699 223 20 20 chr2 108331670 108334168 -144922415 - L1MC1 LINE L1 0 6613 4121 6300 73 3 5 chr2 108334182 108335302 -144921281 - L1PA8A LINE L1 -3 6128 5036 8495 170 6 19 chr2 108335307 108336929 -144919654 + L1P LINE L1 1126 2726 -3420 4722 227 56 33 chr2 108336938 108339197 -144917386 - L1MC1 LINE L1 -2303 4123 1812 22 0 0 0 chr2 108342488 108342510 -144914073 + AT_rich Low_complexity Low_complexity 1 22 0 678 249 5 49 chr2 108342746 108342931 -144913652 - MIR SINE MIR -49 213 37 210 118 0 0 chr2 108343317 108343351 -144913232 + (CA)n Simple_repeat Simple_repeat 1 34 0 1205 238 58 25 chr2 108343408 108343770 -144912813 + MLT1A2 LTR MaLR 1 374 0 355 306 105 0 chr2 108343933 108344057 -144912526 - L2 LINE L2 -244 3069 2933 2074 91 0 7 chr2 108344058 108344387 -144912196 + AluY SINE Alu 1 327 0 7361 189 48 39 chr2 108344400 108346120 -144910463 - L1MCa LINE L1 -4245 2182 5 343 327 9 9 chr2 108346558 108346671 -144909912 + L2 LINE L2 3196 3308 -5 22 0 0 0 chr2 108347129 108347151 -144909432 + AT_rich Low_complexity Low_complexity 1 22 0 249 369 131 0 chr2 108347288 108347448 -144909135 + L2 LINE L2 2605 2785 -529 271 319 47 65 chr2 108347451 108347620 -144908963 + L2 LINE L2 2500 2665 -649 668 274 54 34 chr2 108347838 108348134 -144908449 + LTR33A LTR ERVL 222 523 0 393 349 101 23 chr2 108348134 108348568 -144908015 + L2 LINE L2 2748 3263 -9 203 248 136 48 chr2 108348857 108348982 -144907601 + MER5B DNA MER1_type 43 178 0 320 347 80 19 chr2 108349090 108349110 -144907473 - L2 LINE L2 -448 2866 2849 185 0 40 0 chr2 108349110 108349135 -144907448 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 320 347 80 19 chr2 108349135 108349327 -144907256 - L2 LINE L2 -465 2849 2641 23 33 0 0 chr2 108350552 108350582 -144906001 + AT_rich Low_complexity Low_complexity 1 30 0 249 282 0 35 chr2 108350943 108351028 -144905555 - L2 LINE L2 0 3313 3232 261 0 0 0 chr2 108351634 108351663 -144904920 + (CA)n Simple_repeat Simple_repeat 2 30 0 323 294 70 86 chr2 108351817 108352202 -144904381 - L2 LINE L2 -64 3249 2871 316 222 63 90 chr2 108352312 108352501 -144904082 - L1ME4a LINE L1 -11 6110 5927 266 296 61 24 chr2 108352769 108352964 -144903619 - L1M4 LINE L1 -2292 3854 3654 36 53 0 0 chr2 108353121 108353178 -144903405 + AT_rich Low_complexity Low_complexity 1 57 0 509 260 137 0 chr2 108354547 108354693 -144901890 - MIR SINE MIR -55 207 42 21 0 0 0 chr2 108355375 108355396 -144901187 + AT_rich Low_complexity Low_complexity 1 21 0 219 114 0 0 chr2 108355413 108355448 -144901135 + (TG)n Simple_repeat Simple_repeat 2 36 0 23 33 0 0 chr2 108356348 108356378 -144900205 + AT_rich Low_complexity Low_complexity 1 30 0 216 0 0 0 chr2 108359002 108359026 -144897557 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1923 136 4 0 chr2 108359029 108359309 -144897274 - AluSx SINE Alu -31 281 1 1819 165 100 37 chr2 108359527 108359928 -144896655 - MSTA LTR MaLR 0 428 3 236 302 0 0 chr2 108360325 108360388 -144896195 + MER5A DNA MER1_type 79 141 -48 1855 109 3 28 chr2 108361029 108361313 -144895270 + AluSx SINE Alu 23 299 -13 25 0 0 0 chr2 108362177 108362202 -144894381 + AT_rich Low_complexity Low_complexity 1 25 0 257 296 0 34 chr2 108363557 108363645 -144892938 + L1M4 LINE L1 2635 2719 -3427 252 222 32 0 chr2 108363749 108363812 -144892771 + A-rich Low_complexity Low_complexity 3 67 0 26 30 0 0 chr2 108363820 108363853 -144892730 + AT_rich Low_complexity Low_complexity 1 33 0 365 331 51 35 chr2 108363864 108364118 -144892465 + L1M4 LINE L1 2926 3183 -2963 21 0 0 0 chr2 108364597 108364618 -144891965 + AT_rich Low_complexity Low_complexity 1 21 0 462 257 76 41 chr2 108364714 108364993 -144891590 + L1M4 LINE L1 5271 5555 -607 1746 167 10 26 chr2 108365188 108365499 -144891084 + AluJo SINE Alu 7 312 0 186 43 0 0 chr2 108365502 108365525 -144891058 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 22 70 0 0 chr2 108365670 108365713 -144890870 + AT_rich Low_complexity Low_complexity 1 43 0 6402 181 18 24 chr2 108366596 108367571 -144889012 - L1 LINE L1 -993 5153 4186 2060 121 0 0 chr2 108367571 108367882 -144888701 - AluSg SINE Alu 0 311 1 6402 181 18 24 chr2 108367882 108368250 -144888333 - L1 LINE L1 -1960 4186 3817 4320 158 16 4 chr2 108368254 108369052 -144887531 + L1MA4 LINE L1 5485 6292 -8 3528 233 63 59 chr2 108369643 108371887 -144884696 + L1MC/D LINE L1 1469 3713 -2827 902 254 56 22 chr2 108371898 108372253 -144884330 + L1MC/D LINE L1 4082 4448 -2092 2159 237 93 42 chr2 108372262 108373314 -144883269 + L1MC/D LINE L1 4815 5915 -743 303 28 0 0 chr2 108373439 108373475 -144883108 + (TG)n Simple_repeat Simple_repeat 2 37 0 387 183 0 0 chr2 108373513 108373573 -144883010 + L1MC/D LINE L1 5916 5975 -661 342 45 0 0 chr2 108373818 108373862 -144882721 + (TG)n Simple_repeat Simple_repeat 2 45 0 294 106 0 0 chr2 108373977 108374024 -144882559 + (TTA)n Simple_repeat Simple_repeat 2 48 0 205 280 20 0 chr2 108374344 108374394 -144882189 - MIR SINE MIR -110 152 102 330 315 17 73 chr2 108377420 108377598 -144878985 + MIR SINE MIR 9 176 -86 1980 206 28 65 chr2 108377661 108377721 -144878862 + MLT1D LTR MaLR 21 82 -423 6974 22 1 0 chr2 108377721 108378532 -144878051 + L1PA3 LINE L1 5338 6149 -6 1980 206 28 65 chr2 108378532 108378975 -144877608 + MLT1D LTR MaLR 82 505 0 1343 257 57 67 chr2 108379933 108380547 -144876036 + L1MC4 LINE L1 6475 7082 -960 2205 261 47 3 chr2 108380554 108381174 -144875409 + L1MC4 LINE L1 7254 7900 -142 249 214 0 0 chr2 108381179 108381235 -144875348 + L1MC4 LINE L1 7986 8041 -1 281 309 109 24 chr2 108381806 108381971 -144874612 + L2 LINE L2 3133 3311 -2 2308 148 2 35 chr2 108382635 108383069 -144873514 + L1MA7 LINE L1 5868 6287 -4 1976 101 11 14 chr2 108383703 108384002 -144872581 + AluSc SINE Alu 5 302 0 209 97 32 0 chr2 108384276 108384307 -144872276 + MIR SINE MIR 157 188 -74 339 306 122 14 chr2 108384967 108385114 -144871469 + L2 LINE L2 3110 3272 0 181 250 21 0 chr2 108385835 108385883 -144870700 + MIR SINE MIR 90 138 -70 22 35 0 0 chr2 108386372 108386401 -144870182 + AT_rich Low_complexity Low_complexity 1 29 0 23 33 0 0 chr2 108388368 108388398 -144868185 + AT_rich Low_complexity Low_complexity 1 30 0 190 267 0 0 chr2 108388805 108388835 -144867748 + T-rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr2 108388890 108388913 -144867670 + AT_rich Low_complexity Low_complexity 1 23 0 180 152 0 0 chr2 108389104 108389137 -144867446 + T-rich Low_complexity Low_complexity 1 33 0 180 0 0 0 chr2 108392103 108392123 -144864460 + (T)n Simple_repeat Simple_repeat 1 20 0 288 0 0 0 chr2 108392981 108393013 -144863570 + (T)n Simple_repeat Simple_repeat 1 32 0 228 365 11 98 chr2 108393064 108393207 -144863376 + MIR SINE MIR 20 131 -131 1630 187 7 7 chr2 108393207 108393512 -144863071 + AluSc SINE Alu 3 307 -2 228 365 11 98 chr2 108393512 108393634 -144862949 + MIR SINE MIR 131 262 0 435 318 113 49 chr2 108393653 108394385 -144862198 + L1ME4a LINE L1 4075 4853 -1293 465 338 34 23 chr2 108394604 108394953 -144861630 + L1ME4a LINE L1 5502 5854 -267 414 0 0 0 chr2 108394984 108395030 -144861553 + (TTA)n Simple_repeat Simple_repeat 2 47 0 2084 115 0 0 chr2 108395037 108395316 -144861267 - AluSc SINE Alu -30 279 1 2301 236 45 27 chr2 108396344 108398194 -144858389 - L1MC3 LINE L1 -743 5403 4412 566 97 30 37 chr2 108398197 108398331 -144858252 + CT-rich Low_complexity Low_complexity 2 134 0 1443 251 37 50 chr2 108398333 108398868 -144857715 - L1MC3 LINE L1 -1753 4393 3866 294 368 8 0 chr2 108399018 108399151 -144857432 + MIR SINE MIR 125 258 -4 2066 137 0 0 chr2 108399560 108399852 -144856731 - AluSx SINE Alu -20 292 1 528 314 51 34 chr2 108400915 108401151 -144855432 + MIR SINE MIR 13 252 -10 21 36 0 0 chr2 108401799 108401827 -144854756 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 108403822 108403846 -144852737 + AT_rich Low_complexity Low_complexity 1 24 0 2429 232 73 21 chr2 108403909 108404386 -144852197 - L1MA9 LINE L1 -38 6274 5749 326 23 0 23 chr2 108404386 108404430 -144852153 + (CA)n Simple_repeat Simple_repeat 1 43 0 2429 232 73 21 chr2 108404430 108404632 -144851951 - L1MA9 LINE L1 -563 5749 5559 24 0 0 0 chr2 108406509 108406533 -144850050 + AT_rich Low_complexity Low_complexity 1 24 0 239 286 145 20 chr2 108407286 108407534 -144849049 + L1ME4a LINE L1 5788 6066 -55 262 256 23 23 chr2 108407759 108407845 -144848738 - L2 LINE L2 -37 3276 3191 225 119 0 0 chr2 108408010 108408052 -144848531 + (TG)n Simple_repeat Simple_repeat 2 43 0 262 232 29 0 chr2 108410526 108410595 -144845988 - L3 LINE CR1 -725 852 782 292 184 167 44 chr2 108410672 108410786 -144845797 - L1ME4a LINE L1 -56 6065 5938 722 298 70 63 chr2 108410929 108411342 -144845241 - L3 LINE CR1 -813 764 349 2688 236 2 16 chr2 108412142 108412702 -144843881 + MLT2B3 LTR ERVL 3 554 0 1990 122 0 0 chr2 108412771 108413041 -144843542 - AluSg SINE Alu -40 270 1 851 240 58 0 chr2 108413496 108413704 -144842879 + MER58A DNA MER1_type 5 224 0 2548 233 35 30 chr2 108415573 108416189 -144840394 - L1MD2 LINE L1 -405 6214 5603 5274 42 0 0 chr2 108416189 108416858 -144839725 - L1PA4 LINE L1 0 6155 5515 2548 233 35 30 chr2 108416858 108417590 -144838993 - L1MD2 LINE L1 -1016 5603 4860 255 173 0 0 chr2 108417621 108417673 -144838910 + (TG)n Simple_repeat Simple_repeat 1 52 0 28 29 0 0 chr2 108417687 108417722 -144838861 + AT_rich Low_complexity Low_complexity 1 35 0 541 167 185 9 chr2 108417722 108417938 -144838645 - L1MD2 LINE L1 -2832 3574 3321 788 280 37 22 chr2 108417942 108418213 -144838370 - MLT2D LTR ERVL -72 342 68 1175 255 35 3 chr2 108418233 108418578 -144838005 - L1MD2 LINE L1 -3141 3265 2910 * 2851 220 86 63 chr2 108418576 108419864 -144836719 - L1MD2 LINE L1 -4705 1701 369 662 109 34 8 chr2 108422938 108423057 -144833526 - AluY SINE Alu -23 288 167 204 347 13 13 chr2 108423261 108423336 -144833247 - MIR SINE MIR -110 98 24 1768 107 3 83 chr2 108424183 108424472 -144832111 + AluSx SINE Alu 40 305 -7 1618 71 5 0 chr2 108424698 108424936 -144831647 + L1PA7 LINE L1 5931 6169 0 231 342 0 0 chr2 108425254 108425330 -144831253 + L2 LINE L2 3237 3312 -1 22 0 0 0 chr2 108426916 108426938 -144829645 + AT_rich Low_complexity Low_complexity 1 22 0 1949 130 23 0 chr2 108427027 108427326 -144829257 - AluSx SINE Alu 0 312 7 224 313 0 0 chr2 108427427 108427494 -144829089 + CT-rich Low_complexity Low_complexity 6 72 0 1170 134 0 0 chr2 108427905 108428077 -144828506 + AluSq SINE Alu 142 313 0 29 0 0 0 chr2 108428552 108428581 -144828002 + AT_rich Low_complexity Low_complexity 1 29 0 1135 133 0 6 chr2 108430272 108430445 -144826138 - AluSq SINE Alu 0 313 142 224 313 0 0 chr2 108430856 108430923 -144825660 + GA-rich Low_complexity Low_complexity 6 72 0 1780 148 27 0 chr2 108431024 108431322 -144825261 + AluSx SINE Alu 7 312 0 1278 26 7 0 chr2 108431876 108432074 -144824509 + AluY SINE Alu 131 329 0 512 284 101 70 chr2 108432597 108432984 -144823599 - LTR33 LTR ERVL 0 521 123 721 331 112 28 chr2 108432994 108433521 -144823062 + L2 LINE L2 2741 3313 0 856 210 0 0 chr2 108433583 108433920 -144822663 + FRAM SINE Alu 1 337 0 663 13 0 0 chr2 108433920 108433996 -144822587 + (GGAA)n Simple_repeat Simple_repeat 1 76 0 650 137 0 20 chr2 108434036 108434138 -144822445 - AluJb SINE Alu -24 288 189 1090 172 49 25 chr2 108434252 108434455 -144822128 + THE1B LTR MaLR 155 362 -2 24 32 0 0 chr2 108436365 108436396 -144820187 + AT_rich Low_complexity Low_complexity 1 31 0 1151 258 60 92 chr2 108436878 108437441 -144819142 - MER77 LTR ERV1 -7 598 54 471 320 145 66 chr2 108437473 108437906 -144818677 + L2 LINE L2 1356 1753 -1519 512 115 0 0 chr2 108437906 108437993 -144818590 - L1PB1 LINE L1 -1 6150 6064 471 320 145 66 chr2 108437993 108439271 -144817312 + L2 LINE L2 1753 3240 -32 456 136 0 12 chr2 108439854 108439935 -144816648 - MER116 DNA Mariner 0 80 1 880 282 120 39 chr2 108440458 108440941 -144815642 - L1ME3A LINE L1 -4 6166 5645 1606 262 89 102 chr2 108441017 108442333 -144814250 - L1ME3A LINE L1 -661 5509 4178 2327 82 48 0 chr2 108442333 108442627 -144813956 - AluSc SINE Alu 0 309 2 1606 262 89 102 chr2 108442627 108444009 -144812574 - L1ME3A LINE L1 -1992 4178 2845 2422 93 30 33 chr2 108444023 108444388 -144812195 - THE1B LTR MaLR 0 364 1 21 0 0 0 chr2 108444567 108444588 -144811995 + AT_rich Low_complexity Low_complexity 1 21 0 306 87 0 0 chr2 108445346 108445392 -144811191 + (CA)n Simple_repeat Simple_repeat 2 47 0 2460 62 0 3 chr2 108446720 108447029 -144809554 + AluY SINE Alu 1 308 -3 1016 108 0 18 chr2 108447069 108447236 -144809347 - L1MA5A LINE L1 -111 6186 6023 525 141 0 20 chr2 108447236 108447333 -144809250 + L1MA5A LINE L1 6196 6292 -5 29 0 0 0 chr2 108447404 108447433 -144809150 + AT_rich Low_complexity Low_complexity 1 29 0 3305 202 37 24 chr2 108447500 108447774 -144808809 + L1MB4 LINE L1 4767 5036 -1144 1660 96 0 0 chr2 108447774 108448011 -144808572 + AluSg/x SINE Alu 77 313 0 3305 202 37 24 chr2 108448011 108448973 -144807610 + L1MB4 LINE L1 5036 6020 -160 4439 145 30 73 chr2 108448973 108449937 -144806646 - MER49 LTR ERV1 0 923 1 3305 202 37 24 chr2 108449937 108449994 -144806589 + L1MB4 LINE L1 6020 6075 -105 857 11 0 0 chr2 108449992 108450087 -144806496 - L1PA4 LINE L1 -530 5625 5531 * 4170 32 0 0 chr2 108450088 108450586 -144805997 + L1PA4 LINE L1 5655 6152 -3 487 171 43 0 chr2 108450586 108450700 -144805883 + L1MB3 LINE L1 6062 6183 0 1227 185 49 43 chr2 108450712 108451036 -144805547 + L1MC3 LINE L1 7458 7783 -2 815 153 14 14 chr2 108451433 108451577 -144805006 + AluJb SINE Alu 1 144 -168 426 240 55 32 chr2 108451896 108452113 -144804470 - L1MEc LINE L1 -4029 2367 2146 252 167 0 0 chr2 108452175 108452215 -144804368 - Tigger1 DNA MER2_type -2134 284 245 726 235 53 16 chr2 108452215 108452402 -144804181 + Tigger1 DNA MER2_type 1 194 -2224 * 982 153 132 11 chr2 108452369 108452558 -144804025 + Tigger1 DNA MER2_type 2207 2418 0 464 312 5 5 chr2 108452583 108452769 -144803814 - L1MEc LINE L1 -4578 1818 1633 1036 157 57 32 chr2 108452772 108453020 -144803563 - L1MB4 LINE L1 0 6180 5927 3520 251 64 19 chr2 108453023 108453548 -144803035 - L1MB4 LINE L1 -819 5327 4827 1032 72 0 0 chr2 108453548 108453686 -144802897 + (CTATT)n Simple_repeat Simple_repeat 3 140 0 3520 251 64 19 chr2 108453686 108454218 -144802365 - L1MB4 LINE L1 -1319 4827 4236 252 59 0 0 chr2 108454218 108454252 -144802331 + (TG)n Simple_repeat Simple_repeat 2 35 0 3520 251 64 19 chr2 108454252 108454419 -144802164 - L1MB4 LINE L1 -1910 4236 4078 195 69 0 0 chr2 108456506 108456535 -144800048 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2561 231 94 81 chr2 108456789 108457932 -144798651 + L1MCb LINE L1 8 1164 -4881 2724 23 0 0 chr2 108458152 108458456 -144798127 + AluY SINE Alu 1 304 -7 749 110 47 16 chr2 108458469 108458630 -144797953 + FLAM_C SINE Alu 13 177 0 2128 162 22 16 chr2 108458750 108459115 -144797468 - LTR32 LTR ERVL -5 466 100 890 338 18 14 chr2 108459215 108459724 -144796859 + L2 LINE L2 2638 3150 -163 1241 225 83 38 chr2 108459727 108459802 -144796781 - HsTC2 DNA Tc2 -1 1897 1827 3592 108 4 4 chr2 108459802 108460313 -144796270 - MER9 LTR ERVK 0 511 1 1241 225 83 38 chr2 108460313 108460681 -144795902 - HsTC2 DNA Tc2 -71 1827 1258 257 244 51 26 chr2 108460689 108460766 -144795817 - HsTC2 DNA Tc2 -1296 602 524 916 227 195 103 chr2 108460766 108460891 -144795692 + REP3 LTR ERV 1 113 -449 1559 214 4 0 chr2 108460891 108461172 -144795411 + AluJb SINE Alu 1 282 -30 916 227 195 103 chr2 108461172 108461543 -144795040 + REP3 LTR ERV 113 543 -19 * 1360 253 82 30 chr2 108461536 108462034 -144794549 - HsTC2 DNA Tc2 -1370 528 5 393 241 32 63 chr2 108462042 108462185 -144794398 + L2 LINE L2 3161 3300 -13 2345 102 0 9 chr2 108462185 108462500 -144794083 + AluSx SINE Alu 1 312 0 393 241 32 63 chr2 108462500 108462514 -144794069 + L2 LINE L2 3300 3313 0 297 0 0 0 chr2 108464568 108464601 -144791982 + (TG)n Simple_repeat Simple_repeat 1 33 0 39 84 0 0 chr2 108464682 108464777 -144791806 + AT_rich Low_complexity Low_complexity 1 95 0 22 106 0 0 chr2 108465227 108465312 -144791271 + AT_rich Low_complexity Low_complexity 1 85 0 234 328 98 25 chr2 108465324 108465446 -144791137 - L2 LINE L2 -1 3271 3141 227 174 0 0 chr2 108466076 108466122 -144790461 + LTR66 LTR ERVL 394 439 -171 244 202 0 124 chr2 108466159 108466248 -144790335 - L1MC4 LINE L1 -1340 6702 6625 4145 180 21 20 chr2 108466508 108467903 -144788680 + L1MA7 LINE L1 4698 6099 -192 2091 104 14 0 chr2 108467905 108468228 -144788355 + AluSx SINE Alu 1 327 0 606 264 8 53 chr2 108468355 108468601 -144787982 - L1MCa LINE L1 -1425 5001 4767 7511 201 80 24 chr2 108468607 108470269 -144786314 - MER52A LTR ERV1 0 1755 1 6624 232 43 24 chr2 108470272 108472844 -144783739 - L1MCa LINE L1 -1665 4761 2139 1454 201 4 7 chr2 108472844 108473117 -144783466 + AluJb SINE Alu 36 307 -5 2034 190 25 39 chr2 108473120 108473466 -144783117 - L1MCa LINE L1 -5979 447 106 1928 112 22 4 chr2 108473466 108473784 -144782799 + AluSg SINE Alu 1 323 0 2034 190 25 39 chr2 108473784 108473878 -144782705 - L1MCa LINE L1 -6320 106 12 * 4612 202 30 16 chr2 108473875 108475006 -144781577 - L1MC1 LINE L1 -30 6303 5154 1633 235 70 57 chr2 108475045 108475569 -144781014 - L1MC1 LINE L1 -1325 4821 4289 2071 112 0 0 chr2 108475569 108475845 -144780738 - AluSg SINE Alu 0 310 35 1633 235 70 57 chr2 108475845 108476013 -144780570 - L1MC1 LINE L1 -1857 4289 4125 408 198 0 198 chr2 108475994 108476166 -144780417 - L1 LINE L1 -1894 4252 4115 * 854 245 133 7 chr2 108476166 108476465 -144780118 + LTR52 LTR ERVL 1 337 -84 1358 271 78 25 chr2 108476465 108476941 -144779642 + MLT1D LTR MaLR 1 501 -4 226 240 20 0 chr2 108477020 108477070 -144779513 - L1 LINE L1 -2029 4117 4067 752 240 70 31 chr2 108477072 108477359 -144779224 - L1 LINE L1 -2412 3734 3437 * 1755 352 92 27 chr2 108477332 108478355 -144778228 - L1M4 LINE L1 -4961 1581 493 * 4743 248 61 15 chr2 108478354 108480329 -144776254 - L1ME2 LINE L1 -226 6436 4358 1239 246 56 36 chr2 108480335 108480760 -144775823 - MLT1D LTR MaLR -8 497 68 3285 125 35 2 chr2 108480810 108481330 -144775253 + L1PA15 LINE L1 5610 6146 -19 1023 252 8 15 chr2 108481340 108481602 -144774981 - L1MD1 LINE L1 -53 6189 5930 1073 45 0 0 chr2 108481602 108481796 -144774787 + L1PA3 LINE L1 6024 6217 0 2653 231 31 5 chr2 108481796 108482232 -144774351 - L1MD1 LINE L1 -307 5935 5468 225 0 0 0 chr2 108482232 108482257 -144774326 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2653 231 31 5 chr2 108482257 108482622 -144773961 - L1MD1 LINE L1 -774 5468 5114 1292 213 36 36 chr2 108482628 108482985 -144773598 - L1ME2 LINE L1 -2360 4284 3928 * 1372 281 22 48 chr2 108482980 108483518 -144773065 - L1ME2 LINE L1 -6003 539 16 237 216 52 52 chr2 108483819 108483935 -144772648 - L1MC5 LINE L1 -34 7927 7812 265 304 55 99 chr2 108485230 108485359 -144771224 + L2 LINE L2 2217 2336 -978 1800 153 18 0 chr2 108485359 108485696 -144770887 - AluSx SINE Alu 0 342 1 265 304 55 99 chr2 108485696 108485766 -144770817 + L2 LINE L2 2336 2408 -906 1627 238 65 11 chr2 108485871 108486393 -144770190 - L1MD1 LINE L1 -2100 4046 3497 839 201 11 50 chr2 108486436 108486615 -144769968 - MER20 DNA MER1_type -3 216 45 1725 245 129 32 chr2 108486672 108486714 -144769869 - L1MD1 LINE L1 -2694 3452 3415 1742 123 22 0 chr2 108486714 108486982 -144769601 + L1PA11 LINE L1 5894 6167 -7 1725 245 129 32 chr2 108486982 108487840 -144768743 - L1MD1 LINE L1 -2731 3415 2465 1678 183 21 0 chr2 108488085 108488374 -144768209 + AluJb SINE Alu 1 295 -17 3368 117 4 4 chr2 108489115 108489620 -144766963 + L1PA15 LINE L1 5652 6156 -9 21 0 0 0 chr2 108489620 108489641 -144766942 + AT_rich Low_complexity Low_complexity 1 21 0 414 319 136 41 chr2 108489788 108490296 -144766287 - L1M4 LINE L1 -1186 4960 4405 339 307 66 27 chr2 108490355 108490765 -144765818 - L1M4 LINE L1 -1820 4326 3901 183 42 0 0 chr2 108490931 108490955 -144765628 + (CA)n Simple_repeat Simple_repeat 1 24 0 284 291 12 0 chr2 108491236 108491322 -144765261 + CT-rich Low_complexity Low_complexity 2 88 0 316 318 40 26 chr2 108491562 108491713 -144764870 - L2 LINE L2 -5 3267 3115 199 326 0 0 chr2 108492081 108492130 -144764453 - L2 LINE L2 -87 3185 3137 181 299 149 19 chr2 108492253 108492407 -144764176 - L2 LINE L2 -210 3062 2889 226 284 102 0 chr2 108492458 108492546 -144764037 - L2 LINE L2 -509 2805 2709 665 243 40 6 chr2 108492683 108492856 -144763727 - MIR SINE MIR -11 251 73 236 284 14 0 chr2 108496131 108496205 -144760378 + MER116 DNA Mariner 5 79 -1 1913 131 14 7 chr2 108496406 108496727 -144759856 - AluJb SINE Alu 0 323 1 637 252 10 39 chr2 108496970 108497176 -144759407 - MER3 DNA MER1_type -9 200 1 2239 75 20 7 chr2 108497720 108498013 -144758570 + AluSp SINE Alu 3 299 -14 184 203 203 16 chr2 108498252 108498316 -144758267 + L3b LINE CR1 1251 1326 -257 210 37 0 0 chr2 108499256 108499283 -144757300 + (GA)n Simple_repeat Simple_repeat 1 27 0 1564 241 61 46 chr2 108500241 108501654 -144754929 + L1MD2 LINE L1 26 1713 -4827 1387 194 67 30 chr2 108501650 108502052 -144754531 + L1MD2 LINE L1 2227 2643 -3897 * 6592 253 81 23 chr2 108502050 108502522 -144754061 + L1MD2 LINE L1 2918 3361 -3392 1990 135 10 0 chr2 108502522 108502826 -144753757 + AluSx SINE Alu 1 307 -5 6592 253 81 23 chr2 108502826 108504768 -144751815 + L1MD2 LINE L1 3361 5612 -1141 1666 143 34 3 chr2 108504768 108505061 -144751522 + L1MA5 LINE L1 5996 6297 -3 6592 253 81 23 chr2 108505061 108506263 -144750320 + L1MD2 LINE L1 5612 6743 -10 819 186 26 47 chr2 108506351 108506544 -144750039 + MER5A DNA MER1_type 1 189 0 26 50 0 0 chr2 108507024 108507064 -144749519 + AT_rich Low_complexity Low_complexity 1 40 0 7103 43 0 1 chr2 108507819 108508739 -144747844 + L1PA4 LINE L1 5220 6148 -7 243 0 0 0 chr2 108508739 108508766 -144747817 + (TA)n Simple_repeat Simple_repeat 1 27 0 189 0 0 0 chr2 108510030 108510051 -144746532 + (TG)n Simple_repeat Simple_repeat 2 22 0 228 169 34 34 chr2 108510444 108510503 -144746080 + L1MC4 LINE L1 6648 6706 -1336 258 235 15 0 chr2 108510507 108510575 -144746008 + (TA)n Simple_repeat Simple_repeat 2 70 0 1733 130 29 44 chr2 108511293 108511609 -144744974 + MSTB LTR MaLR 1 311 -115 29 0 0 0 chr2 108512111 108512140 -144744443 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 108512150 108512171 -144744412 + AT_rich Low_complexity Low_complexity 1 21 0 261 300 40 47 chr2 108512735 108512988 -144743595 + L1MEd LINE L1 597 847 -5272 1930 182 42 10 chr2 108513057 108513441 -144743142 - MSTD LTR MaLR 0 396 1 22 35 0 0 chr2 108513482 108513511 -144743072 + AT_rich Low_complexity Low_complexity 1 29 0 329 292 6 60 chr2 108513775 108513943 -144742640 + L1MB4 LINE L1 2 160 -6382 334 299 35 7 chr2 108514325 108514469 -144742114 + L1MB4 LINE L1 802 949 -5697 220 196 39 0 chr2 108514525 108514576 -144742007 + (TTTG)n Simple_repeat Simple_repeat 2 54 0 4545 216 91 61 chr2 108514587 108515562 -144741021 + L1MB4 LINE L1 832 1776 -4868 1968 138 3 24 chr2 108515562 108515910 -144740673 + AluSx SINE Alu 1 312 0 4545 216 91 61 chr2 108515910 108517651 -144738932 + L1MB4 LINE L1 1776 3585 -3059 1318 191 46 113 chr2 108517651 108517944 -144738639 + L1MB4 LINE L1 4363 4609 -2035 1757 49 5 0 chr2 108517944 108518168 -144738415 - L1PA5 LINE L1 -6 6148 5924 1318 191 46 113 chr2 108518168 108518378 -144738205 + L1MB4 LINE L1 4609 4832 -1812 192 97 0 0 chr2 108518833 108518864 -144737719 + (GA)n Simple_repeat Simple_repeat 1 31 0 582 126 95 0 chr2 108519125 108519336 -144737247 - L1MA6 LINE L1 -10 6290 6026 4255 208 64 15 chr2 108519369 108521160 -144735423 + L1MB4 LINE L1 4805 6678 0 4666 212 41 80 chr2 108521445 108522956 -144733627 + L1ME1 LINE L1 3892 5302 -864 1693 95 0 0 chr2 108522956 108523177 -144733406 + AluY SINE Alu 86 306 -5 4666 212 41 80 chr2 108523177 108523827 -144732756 + L1ME1 LINE L1 5302 5975 -191 236 127 159 32 chr2 108523827 108523890 -144732693 + L1MB7 LINE L1 6051 6121 -57 1749 170 0 24 chr2 108523955 108524043 -144732540 + AluJb SINE Alu 7 96 -216 1991 153 36 8 chr2 108524043 108524408 -144732175 - THE1C LTR MaLR 0 375 1 1749 170 0 24 chr2 108524408 108524613 -144731970 + AluJb SINE Alu 96 293 -19 1076 103 0 0 chr2 108524644 108524789 -144731794 - AluY SINE Alu -4 307 163 2311 112 36 20 chr2 108525311 108525669 -144730914 - THE1B LTR MaLR 0 364 1 22 0 0 0 chr2 108526455 108526477 -144730106 + AT_rich Low_complexity Low_complexity 1 22 0 267 288 74 89 chr2 108530260 108530517 -144726066 + L1ME LINE L1 5564 5818 -303 2031 113 0 11 chr2 108530648 108530930 -144725653 + AluY SINE Alu 1 279 -32 267 54 0 0 chr2 108530930 108530967 -144725616 + (CAAT)n Simple_repeat Simple_repeat 4 40 0 29 47 0 0 chr2 108531436 108531479 -144725104 + AT_rich Low_complexity Low_complexity 1 43 0 266 180 230 20 chr2 108532193 108532293 -144724290 + LTR54 LTR ERV1 60 180 -330 31 0 0 0 chr2 108532616 108532647 -144723936 + AT_rich Low_complexity Low_complexity 1 31 0 2103 188 56 9 chr2 108532748 108533196 -144723387 - L1MC1 LINE L1 0 6402 5934 773 120 56 7 chr2 108533198 108533340 -144723243 + L1MA4 LINE L1 6146 6294 -6 2117 107 3 3 chr2 108533343 108533633 -144722950 - AluSg SINE Alu -20 290 1 294 191 0 16 chr2 108533651 108533714 -144722869 - L1MC1 LINE L1 -1286 4929 4868 328 351 58 8 chr2 108533818 108534077 -144722506 - L1M4 LINE L1 -3440 2706 2435 384 296 19 6 chr2 108534094 108534253 -144722330 - L1MC1 LINE L1 -2742 3473 3313 258 211 0 0 chr2 108534425 108534529 -144722054 + (TA)n Simple_repeat Simple_repeat 2 105 0 448 204 11 0 chr2 108534563 108534739 -144721844 + (TA)n Simple_repeat Simple_repeat 1 178 0 207 151 41 27 chr2 108534752 108534825 -144721758 + (TTATA)n Simple_repeat Simple_repeat 5 78 0 * 431 172 46 17 chr2 108534800 108534974 -144721609 + (TA)n Simple_repeat Simple_repeat 2 180 0 544 270 170 41 chr2 108535009 108536055 -144720528 - L1MC1 LINE L1 -3663 2552 1407 26 64 0 0 chr2 108536539 108536586 -144719997 + AT_rich Low_complexity Low_complexity 1 47 0 524 303 32 12 chr2 108537374 108537566 -144719017 + MIR SINE MIR 24 216 -46 560 123 115 31 chr2 108537640 108537770 -144718813 + MER53 DNA DNA 48 188 -1 235 263 50 30 chr2 108537970 108538069 -144718514 + Charlie5 DNA MER1_type 2524 2624 0 1897 155 20 0 chr2 108538642 108538668 -144717915 - AluSx SINE Alu -2 310 286 297 0 0 0 chr2 108538668 108538701 -144717882 + (TG)n Simple_repeat Simple_repeat 2 34 0 1897 155 20 0 chr2 108538701 108538978 -144717605 - AluSx SINE Alu -26 286 1 1971 63 0 22 chr2 108541793 108542061 -144714522 + AluY SINE Alu 44 305 -6 293 279 59 94 chr2 108542621 108542875 -144713708 - L2 LINE L2 0 3313 3069 221 275 28 73 chr2 108542978 108543087 -144713496 - MIR SINE MIR -115 147 44 21 0 0 0 chr2 108545291 108545312 -144711271 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 108546492 108546515 -144710068 + AT_rich Low_complexity Low_complexity 1 23 0 28 29 0 0 chr2 108548798 108548833 -144707750 + AT_rich Low_complexity Low_complexity 1 35 0 1577 161 25 21 chr2 108549722 108550001 -144706582 + AluJb SINE Alu 9 288 -24 854 239 0 17 chr2 108554425 108554601 -144701982 + FAM SINE Alu 1 173 -2 3570 137 23 48 chr2 108555311 108556019 -144700564 - L1MA7 LINE L1 -6 6285 5596 518 299 30 99 chr2 108556881 108557275 -144699308 - MLT1I LTR MaLR -3 406 40 23 54 0 0 chr2 108557386 108557423 -144699160 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr2 108557597 108557620 -144698963 + AT_rich Low_complexity Low_complexity 1 23 0 690 281 87 12 chr2 108558182 108558435 -144698148 + MER46C DNA MER2_type 67 338 0 22 0 0 0 chr2 108559266 108559288 -144697295 + AT_rich Low_complexity Low_complexity 1 22 0 612 269 167 27 chr2 108559434 108559805 -144696778 - MLT1H LTR MaLR 0 549 127 573 281 78 37 chr2 108560138 108560355 -144696228 + Charlie2 DNA MER1_type 397 622 -2160 2134 183 54 22 chr2 108560418 108560959 -144695624 + Charlie2 DNA MER1_type 2305 2862 0 592 272 117 10 chr2 108562542 108562748 -144693835 - MIR SINE MIR -3 259 32 613 179 117 37 chr2 108562751 108562913 -144693670 - MER3 DNA MER1_type -81 128 1 21 0 0 0 chr2 108563257 108563278 -144693305 + AT_rich Low_complexity Low_complexity 1 21 0 24 85 0 0 chr2 108565731 108565790 -144690793 + AT_rich Low_complexity Low_complexity 1 59 0 435 145 0 0 chr2 108566213 108566296 -144690287 + (TCCA)n Simple_repeat Simple_repeat 4 86 0 28 48 0 0 chr2 108566420 108566462 -144690121 + AT_rich Low_complexity Low_complexity 1 42 0 324 64 0 0 chr2 108566480 108566527 -144690056 + (TCTA)n Simple_repeat Simple_repeat 3 49 0 217 307 181 16 chr2 108566606 108566733 -144689850 + L2 LINE L2 3124 3271 -1 180 318 74 40 chr2 108566715 108566891 -144689692 - L2 LINE L2 -278 2994 2813 * 405 173 9 18 chr2 108569036 108569146 -144687437 + CT-rich Low_complexity Low_complexity 2 110 0 239 200 0 33 chr2 108569162 108569222 -144687361 + CT-rich Low_complexity Low_complexity 3 60 0 761 148 0 0 chr2 108623945 108624067 -144632516 - MER51-int LTR ERV1 -2582 3364 3243 * 2818 123 57 17 chr2 108624065 108624720 -144631863 - MER51-int LTR ERV1 -3673 4143 3336 344 125 36 0 chr2 108624697 108624753 -144631830 - MER51-int LTR ERV1 -3722 2224 2167 * 1107 80 0 7 chr2 108624752 108624902 -144631681 - MER51-int LTR ERV1 -3932 2014 1866 862 137 77 40 chr2 108624902 108625145 -144631438 - MER51-int LTR ERV1 -4232 3584 648 649 171 12 3 chr2 108625245 108625372 -144631211 - L1P LINE L1 -2534 3612 3485 1267 122 6 0 chr2 108625375 108625547 -144631036 - AluJb SINE Alu -19 293 121 2799 245 14 12 chr2 108625600 108626411 -144630172 - L1P LINE L1 -2653 3493 2682 688 187 128 59 chr2 108626515 108626662 -144629921 - Charlie4 DNA MER1_type -266 242 76 2145 121 3 10 chr2 108626662 108626969 -144629614 - AluSx SINE Alu -7 305 1 688 187 128 59 chr2 108626969 108627024 -144629559 - Charlie4 DNA MER1_type -432 76 26 1755 249 21 14 chr2 108628083 108628646 -144627937 - L1M4 LINE L1 -1487 4659 4093 2053 239 44 24 chr2 108628655 108629359 -144627224 - L1M4 LINE L1 -2099 4047 3330 512 209 36 0 chr2 108629459 108629569 -144627014 - MLT1G LTR MaLR -57 533 420 2609 138 9 14 chr2 108629994 108630436 -144626147 + L1MC1 LINE L1 5889 6328 -5 1001 282 42 18 chr2 108630827 108631160 -144625423 + L3b LINE CR1 1112 1452 -131 421 32 32 0 chr2 108631598 108631661 -144624922 + (TCTA)n Simple_repeat Simple_repeat 3 67 0 344 268 18 6 chr2 108631661 108631825 -144624758 + (TA)n Simple_repeat Simple_repeat 2 167 0 257 309 13 34 chr2 108631831 108631980 -144624603 + L1MEd LINE L1 1090 1235 -4884 325 283 95 82 chr2 108632008 108632312 -144624271 + L1MEd LINE L1 1301 1608 -4521 2139 118 0 3 chr2 108632702 108632998 -144623585 - AluSx SINE Alu -17 295 1 245 255 160 28 chr2 108634520 108634626 -144621957 + MIR SINE MIR 20 139 -69 1133 152 91 54 chr2 108634841 108635138 -144621445 + MER33 DNA MER1_type 17 324 0 783 217 29 6 chr2 108636564 108636739 -144619844 - L1MC3 LINE L1 -588 7197 7019 238 347 58 8 chr2 108636773 108636894 -144619689 - MIR3 SINE MIR -15 193 67 2395 189 33 15 chr2 108637284 108637823 -144618760 - L1MC3 LINE L1 -21 7764 7216 274 239 11 22 chr2 108637844 108637936 -144618647 - MLT1F1 LTR MaLR -442 125 35 206 314 136 14 chr2 108638461 108638601 -144617982 - L2 LINE L2 -1 3271 3115 2383 109 0 0 chr2 108642145 108642457 -144614126 + AluSq SINE Alu 1 312 -1 510 319 75 0 chr2 108643074 108643234 -144613349 + MER91A DNA MER1_type 9 180 -16 564 257 20 0 chr2 108643339 108643491 -144613092 - MER112 DNA MER1_type -102 158 4 2340 80 0 0 chr2 108643847 108644136 -144612447 - AluSg SINE Alu -13 297 9 242 254 97 18 chr2 108644741 108644855 -144611728 - MIR3 SINE MIR -18 190 68 1705 201 7 0 chr2 108645753 108646062 -144610521 - AluJb SINE Alu -1 311 1 626 297 151 0 chr2 108646705 108646924 -144609659 + MIR SINE MIR 10 261 -1 2841 121 26 32 chr2 108646971 108647476 -144609107 + L1MA6 LINE L1 5794 6295 -5 789 216 77 0 chr2 108648184 108648378 -144608205 + MER3 DNA MER1_type 1 209 0 182 308 199 27 chr2 108650018 108650164 -144606419 + MIR3 SINE MIR 33 203 -5 338 283 57 49 chr2 108654856 108655100 -144601483 - LTR16A1 LTR ERVL -2 455 210 510 311 23 62 chr2 108655294 108655551 -144601032 + MIR SINE MIR 9 255 -7 1821 189 17 3 chr2 108656859 108657219 -144599364 + MLT1A1 LTR MaLR 1 365 0 222 303 13 0 chr2 108657266 108657342 -144599241 + MIR SINE MIR 186 262 0 275 373 53 6 chr2 108657942 108658111 -144598472 - MIR SINE MIR -40 222 46 1490 171 79 83 chr2 108660369 108660768 -144595815 + MSTB2 LTR MaLR 3 402 -55 2242 78 0 3 chr2 108660768 108661074 -144595509 + AluY SINE Alu 1 305 0 1490 171 79 83 chr2 108661074 108661130 -144595453 + MSTB2 LTR MaLR 402 457 0 359 312 89 0 chr2 108661793 108661950 -144594633 + L2 LINE L2 2366 2536 -778 1125 158 0 30 chr2 108661956 108662158 -144594425 + AluJo SINE Alu 87 282 -30 627 336 79 45 chr2 108662207 108662783 -144593800 + L2 LINE L2 2711 3303 -10 1965 293 109 20 chr2 108662864 108663968 -144592615 + L2 LINE L2 2036 3238 -75 4041 180 30 22 chr2 108664098 108665234 -144591349 + L1MB8 LINE L1 4961 6098 -80 565 255 55 7 chr2 108665237 108665382 -144591201 + L2 LINE L2 3158 3309 -4 22 56 0 0 chr2 108666444 108666480 -144590103 + AT_rich Low_complexity Low_complexity 1 36 0 1306 128 20 0 chr2 108667438 108667642 -144588941 + Tigger3(Golem) DNA MER2_type 2821 3028 -1 2247 105 0 3 chr2 108668872 108669168 -144587415 + AluSq SINE Alu 1 295 -18 469 249 92 97 chr2 108669206 108669376 -144587207 + L1ME1 LINE L1 2788 2957 -3189 2305 82 0 3 chr2 108669376 108669670 -144586913 + AluY SINE Alu 1 293 -18 469 249 92 97 chr2 108669670 108669869 -144586714 + L1ME1 LINE L1 2957 3155 -2991 598 331 139 26 chr2 108670198 108670859 -144585724 - L1M4 LINE L1 -1388 4758 4023 6884 228 93 17 chr2 108670881 108674555 -144582028 + L1MD2 LINE L1 2388 6349 -10 367 249 99 64 chr2 108674581 108674798 -144581785 - L1M4 LINE L1 -2246 3900 3662 2195 213 26 20 chr2 108675513 108676484 -144580099 + L1ME1 LINE L1 4895 5868 -298 447 297 16 54 chr2 108676910 108677095 -144579488 - MER8 DNA MER2_type -60 179 2 182 330 23 23 chr2 108677173 108677261 -144579322 - L2 LINE L2 0 3313 3226 247 310 58 19 chr2 108677615 108677770 -144578813 + L1MEd LINE L1 3 163 -5956 592 302 51 60 chr2 108678042 108678496 -144578087 + L1M4 LINE L1 4733 5182 -964 186 304 0 0 chr2 108678832 108678878 -144577705 - L2 LINE L2 -1 3271 3226 515 305 0 40 chr2 108678882 108679033 -144577550 - MIR SINE MIR -101 161 17 212 339 0 0 chr2 108679042 108679104 -144577479 + (TATATG)n Simple_repeat Simple_repeat 4 65 0 324 0 0 0 chr2 108679946 108679982 -144576601 + (TG)n Simple_repeat Simple_repeat 2 37 0 699 245 130 5 chr2 108680541 108680757 -144575826 + MIR SINE MIR 5 247 -15 23 33 0 0 chr2 108682230 108682260 -144574323 + AT_rich Low_complexity Low_complexity 1 30 0 725 271 35 31 chr2 108685036 108685265 -144571318 - L3 LINE CR1 -4 1573 1344 729 200 113 0 chr2 108685304 108685464 -144571119 + MER45A DNA AcHobo 1 178 0 349 289 40 12 chr2 108685822 108685950 -144570633 + MIR SINE MIR 5 140 -68 2414 44 0 0 chr2 108687184 108687459 -144569124 - AluY SINE Alu -16 295 21 236 351 0 0 chr2 108687883 108687997 -144568586 + G-rich Low_complexity Low_complexity 5 118 0 261 204 37 46 chr2 108688098 108688206 -144568377 - L1MC3 LINE L1 -883 6902 6796 333 309 127 39 chr2 108688304 108688767 -144567816 + LTR33 LTR ERVL 4 507 -14 1985 119 0 0 chr2 108688849 108689155 -144567428 + AluSc SINE Alu 1 306 0 494 196 28 22 chr2 108689204 108689383 -144567200 + GA-rich Low_complexity Low_complexity 1 180 0 218 283 129 78 chr2 108689943 108690155 -144566428 - MIR SINE MIR -14 248 20 198 291 95 57 chr2 108690999 108691157 -144565426 - MIR3 SINE MIR -21 187 24 198 278 19 111 chr2 108691215 108691323 -144565260 - L2 LINE L2 -1 3271 3174 582 330 25 8 chr2 108691723 108691962 -144564621 - MIR SINE MIR -14 248 6 290 25 0 25 chr2 108692284 108692324 -144564259 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 330 26 0 0 chr2 108694140 108694179 -144562404 + (TG)n Simple_repeat Simple_repeat 2 40 0 26 30 0 0 chr2 108694425 108694458 -144562125 + AT_rich Low_complexity Low_complexity 1 33 0 924 220 37 14 chr2 108695225 108695575 -144561008 - L1M4 LINE L1 -2884 3262 2905 * 1702 272 58 26 chr2 108695564 108696170 -144560413 - L1MDb LINE L1 -5777 632 8 617 147 37 0 chr2 108700067 108700176 -144556407 + FLAM_C SINE Alu 11 123 -20 676 206 186 28 chr2 108700235 108700488 -144556095 + MLT1D LTR MaLR 101 393 -112 301 143 0 0 chr2 108700752 108700808 -144555775 - L1MA10 LINE L1 -464 5827 5772 * 1617 204 13 87 chr2 108700801 108701105 -144555478 + L1MA10 LINE L1 5834 6082 -252 2269 48 45 10 chr2 108701105 108701394 -144555189 + AluY SINE Alu 1 299 -12 1617 204 13 87 chr2 108701394 108701628 -144554955 + L1MA10 LINE L1 6082 6332 -2 301 187 11 110 chr2 108701708 108701799 -144554784 + MLT1H LTR MaLR 42 123 -426 1528 251 73 32 chr2 108702466 108703059 -144553524 - MLT1G LTR MaLR 0 590 1 180 0 0 0 chr2 108703078 108703098 -144553485 + (TTTTA)n Simple_repeat Simple_repeat 4 23 0 3314 35 2 0 chr2 108703098 108703499 -144553084 - L1PA4 LINE L1 -13 6142 5741 2148 108 0 38 chr2 108703949 108704263 -144552320 + AluSq SINE Alu 1 302 -11 306 318 93 93 chr2 108704353 108704749 -144551834 - L2 LINE L2 -24 3248 2853 1774 156 104 0 chr2 108705193 108705519 -144551064 - MER46B DNA MER2_type 0 236 2 189 139 0 0 chr2 108706308 108706351 -144550232 + (A)n Simple_repeat Simple_repeat 1 43 0 763 223 83 73 chr2 108706637 108707019 -144549564 - MLT1A2 LTR MaLR -1 427 1 210 276 35 0 chr2 108709652 108709710 -144546873 + L2 LINE L2 3249 3308 -5 2250 77 23 23 chr2 108710257 108710556 -144546027 - AluSg SINE Alu -11 299 1 336 48 0 0 chr2 108711001 108711043 -144545540 + (TAGA)n Simple_repeat Simple_repeat 2 43 0 2185 92 0 20 chr2 108711207 108711512 -144545071 - AluY SINE Alu -12 299 1 225 0 0 0 chr2 108712926 108712968 -144543615 + (GA)n Simple_repeat Simple_repeat 1 67 0 225 0 0 0 chr2 108712968 108712993 -144543590 + (GA)n Simple_repeat Simple_repeat 1 25 0 341 94 0 0 chr2 108720704 108720757 -144535826 - L1PA6 LINE L1 0 6154 6102 182 62 31 0 chr2 108724030 108724062 -144532521 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 356 235 25 0 chr2 108724991 108725072 -144531511 + MIR SINE MIR 1 83 -179 420 310 0 8 chr2 108725117 108725246 -144531337 - MIR SINE MIR -10 252 125 23 54 0 0 chr2 108725930 108725967 -144530616 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr2 108726082 108726103 -144530480 + AT_rich Low_complexity Low_complexity 1 21 0 310 317 93 38 chr2 108726255 108726438 -144530145 - MIR SINE MIR -64 198 6 828 177 28 17 chr2 108726517 108726698 -144529885 - MER53 DNA DNA -6 183 1 2401 86 7 0 chr2 108727696 108727999 -144528584 + AluSp SINE Alu 1 305 -8 802 260 169 0 chr2 108728170 108728601 -144527982 + L1MD1 LINE L1 4863 5366 -780 * 4882 150 21 53 chr2 108728585 108729783 -144526800 + L1MA7 LINE L1 5126 6287 -4 3341 197 84 5 chr2 108729817 108730638 -144525945 + L1MD1 LINE L1 5354 6239 -3 382 216 108 50 chr2 108731763 108731902 -144524681 - MER5B DNA MER1_type -23 155 9 654 103 0 0 chr2 108733051 108733138 -144523445 - AluSp/q SINE Alu -39 274 188 2265 90 10 7 chr2 108733153 108733454 -144523129 - AluY SINE Alu -9 302 1 2298 94 16 10 chr2 108733675 108733983 -144522600 - AluSx SINE Alu -2 310 1 1004 266 60 41 chr2 108734128 108734534 -144522049 - MLT1L LTR MaLR -153 400 27 621 272 0 30 chr2 108734552 108734721 -144521862 - MIR SINE MIR -98 164 1 9379 97 8 16 chr2 108736220 108736579 -144520004 + HSMAR1 DNA Mariner 7 367 -920 1995 131 16 22 chr2 108736579 108736893 -144519690 + AluSx SINE Alu 1 312 0 9379 97 8 16 chr2 108736893 108737818 -144518765 + HSMAR1 DNA Mariner 367 1281 -6 322 311 106 22 chr2 108737823 108738003 -144518580 + L1ME LINE L1 5592 5786 -335 23 0 0 0 chr2 108738106 108738129 -144518454 + AT_rich Low_complexity Low_complexity 1 23 0 190 358 0 15 chr2 108738408 108738475 -144518108 + L2 LINE L2 3115 3180 -92 208 311 219 8 chr2 108738630 108738749 -144517834 - MIR3 SINE MIR -64 144 1 460 263 106 88 chr2 108738846 108739234 -144517349 + MLT1H LTR MaLR 123 517 -32 390 277 23 8 chr2 108739320 108739450 -144517133 - MER117 DNA MER1_type -65 132 1 235 286 59 17 chr2 108739838 108739957 -144516626 + MIR SINE MIR 89 212 -50 1482 116 36 5 chr2 108744735 108744959 -144511624 + L1PA12 LINE L1 5921 6151 -17 244 277 15 0 chr2 108745472 108745537 -144511046 + (TA)n Simple_repeat Simple_repeat 2 67 0 207 0 0 0 chr2 108746905 108746928 -144509655 + (CA)n Simple_repeat Simple_repeat 2 24 0 340 292 10 10 chr2 108747138 108747234 -144509349 + L2 LINE L2 3212 3307 -6 193 220 43 163 chr2 108747838 108747910 -144508673 - L2 LINE L2 -64 3249 3170 1157 129 138 43 chr2 108747910 108748120 -144508463 - MER30 DNA MER1_type 0 230 1 193 220 43 163 chr2 108748120 108748329 -144508254 - L2 LINE L2 -143 3170 3002 1141 101 38 0 chr2 108748965 108749147 -144507436 - AluSc SINE Alu 0 303 116 22 0 0 0 chr2 108749762 108749784 -144506799 + AT_rich Low_complexity Low_complexity 1 22 0 2257 80 0 7 chr2 108749968 108750267 -144506316 + AluSx SINE Alu 9 305 -7 2807 155 33 31 chr2 108750267 108750733 -144505850 + L1MB3 LINE L1 5664 6136 -47 2089 108 0 60 chr2 108750733 108751065 -144505518 + AluSq SINE Alu 1 312 -1 2807 155 33 31 chr2 108751065 108751107 -144505476 + L1MB3 LINE L1 6136 6176 -7 495 339 92 24 chr2 108754124 108754400 -144502183 + L2 LINE L2 1828 2084 -1230 1425 164 110 41 chr2 108754400 108754486 -144502097 - MER44D DNA MER2_type -1882 609 530 303 28 0 0 chr2 108754486 108754522 -144502061 + (TA)n Simple_repeat Simple_repeat 2 37 0 1425 164 110 41 chr2 108754522 108754752 -144501831 - MER44D DNA MER2_type -1961 530 1 495 339 92 24 chr2 108754752 108754967 -144501616 + L2 LINE L2 2084 2352 -962 2453 147 22 69 chr2 108756019 108756468 -144500115 - MSTA LTR MaLR 0 428 1 2262 214 45 28 chr2 108756695 108757233 -144499350 - MER70B LTR ERVL 0 578 32 269 286 203 39 chr2 108757263 108757445 -144499138 + MIR SINE MIR 50 261 -1 4463 115 60 81 chr2 108758418 108759220 -144497363 - LTR1 LTR ERV1 0 785 1 443 282 90 22 chr2 108759411 108759823 -144496760 + LTR33A LTR ERVL 59 521 0 208 399 27 7 chr2 108760371 108760519 -144496064 + L2 LINE L2 2630 2780 -534 1124 215 53 11 chr2 108760970 108761235 -144495348 - L1ME LINE L1 -613 5551 5276 1713 160 32 7 chr2 108763483 108763764 -144492819 - AluJb SINE Alu -24 288 1 249 119 0 0 chr2 108764231 108764273 -144492310 + (TGAA)n Simple_repeat Simple_repeat 1 42 0 800 194 0 0 chr2 108764445 108764584 -144491999 - FLAM_C SINE Alu -4 139 1 445 259 56 25 chr2 108764866 108765028 -144491555 - MIR SINE MIR -2 260 94 230 338 154 21 chr2 108765027 108765261 -144491322 + L2 LINE L2 2996 3260 -12 * 462 259 25 61 chr2 108765541 108765738 -144490845 + MIR SINE MIR 13 202 -60 1759 234 92 5 chr2 108765828 108766251 -144490332 + MER82 DNA MER2_type 127 586 -67 1877 147 52 78 chr2 108766255 108766663 -144489920 + MER57A LTR ERV1 7 403 0 335 182 61 0 chr2 108766663 108766729 -144489854 + MER82 DNA MER2_type 582 651 -2 1504 187 75 0 chr2 108766826 108767104 -144489479 - AluJo SINE Alu -13 299 1 343 334 70 40 chr2 108767170 108767616 -144488967 + L2 LINE L2 1671 2129 -1185 2493 190 27 0 chr2 108767795 108768243 -144488340 - MER74C LTR ERVL 0 460 1 340 314 67 0 chr2 108768318 108768423 -144488160 + L2 LINE L2 3111 3222 -50 290 333 96 30 chr2 108768953 108769286 -144487297 + L2 LINE L2 1893 2247 -1067 6445 125 10 29 chr2 108769294 108769963 -144486620 + L1MA8 LINE L1 5156 5796 -495 2588 55 0 0 chr2 108769963 108770270 -144486313 + AluY SINE Alu 3 309 -2 6445 125 10 29 chr2 108770270 108770752 -144485831 + L1MA8 LINE L1 5796 6286 -5 26 0 0 0 chr2 108770854 108770880 -144485703 + AT_rich Low_complexity Low_complexity 1 26 0 668 174 9 9 chr2 108771663 108771778 -144484805 + FLAM_C SINE Alu 4 118 -15 333 0 0 0 chr2 108772429 108772466 -144484117 + (A)n Simple_repeat Simple_repeat 1 37 0 320 258 0 0 chr2 108773186 108773252 -144483331 - L2 LINE L2 -8 3264 3199 22 35 0 0 chr2 108774305 108774334 -144482249 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr2 108774890 108774918 -144481665 + AT_rich Low_complexity Low_complexity 1 28 0 197 167 146 0 chr2 108775077 108775125 -144481458 + MIR SINE MIR 133 187 -75 681 294 116 43 chr2 108777059 108777430 -144479153 - MLT1I LTR MaLR -8 401 4 8198 20 1 1 chr2 108777816 108779374 -144477209 + L1PA3 LINE L1 4622 6155 0 21 0 0 0 chr2 108779388 108779409 -144477174 + AT_rich Low_complexity Low_complexity 1 21 0 2328 70 7 3 chr2 108779427 108779725 -144476858 + AluY SINE Alu 1 299 -12 2169 114 3 3 chr2 108780333 108780632 -144475951 + AluY SINE Alu 1 299 -12 212 107 27 71 chr2 108781379 108781491 -144475092 + G-rich Low_complexity Low_complexity 4 110 0 36 0 0 0 chr2 108784765 108784801 -144471782 + AT_rich Low_complexity Low_complexity 1 36 0 222 276 23 11 chr2 108787327 108787414 -144469169 + (TA)n Simple_repeat Simple_repeat 1 88 0 217 194 0 56 chr2 108789048 108789120 -144467463 + A-rich Low_complexity Low_complexity 3 70 0 32 43 0 0 chr2 108789621 108789667 -144466916 + AT_rich Low_complexity Low_complexity 1 46 0 200 179 0 60 chr2 108790328 108790412 -144466171 + A-rich Low_complexity Low_complexity 1 79 0 319 184 31 61 chr2 108790734 108790897 -144465686 + (CACCC)n Simple_repeat Simple_repeat 3 160 0 192 77 0 0 chr2 108792059 108792085 -144464498 + (CA)n Simple_repeat Simple_repeat 2 27 0 183 42 0 0 chr2 108794897 108794921 -144461662 + (CA)n Simple_repeat Simple_repeat 2 25 0 242 342 0 0 chr2 108795061 108795210 -144461373 + G-rich Low_complexity Low_complexity 1 149 0 * 439 201 41 18 chr2 108795189 108795427 -144461156 + (GGGTG)n Simple_repeat Simple_repeat 1 243 0 238 290 29 0 chr2 108797444 108797513 -144459070 + MIR SINE MIR 73 143 -119 39 22 0 0 chr2 108798066 108798112 -144458471 + AT_rich Low_complexity Low_complexity 1 46 0 21 36 0 0 chr2 108798251 108798279 -144458304 + AT_rich Low_complexity Low_complexity 1 28 0 2068 88 14 10 chr2 108798847 108799141 -144457442 + AluSg1 SINE Alu 1 295 -14 43 35 0 0 chr2 108799188 108799245 -144457338 + AT_rich Low_complexity Low_complexity 1 57 0 267 175 0 0 chr2 108801587 108801644 -144454939 + (TA)n Simple_repeat Simple_repeat 1 57 0 217 65 0 81 chr2 108801694 108801756 -144454827 + (TA)n Simple_repeat Simple_repeat 1 57 0 583 72 5 83 chr2 108801768 108801961 -144454622 + (TA)n Simple_repeat Simple_repeat 1 178 0 306 299 102 13 chr2 108902523 108902680 -144353903 + MIR SINE MIR 44 214 -48 994 263 24 14 chr2 108903592 108903889 -144352694 + L1MC4a LINE L1 5528 5827 -1981 325 315 34 7 chr2 108903901 108904047 -144352536 + L1MC4a LINE L1 5914 6063 -1745 461 294 128 38 chr2 108904129 108904802 -144351781 + L1MC4 LINE L1 6221 7066 -976 241 260 70 10 chr2 108904851 108904951 -144351632 + L1MC5 LINE L1 6957 7062 -899 622 266 85 15 chr2 108905179 108905462 -144351121 + MLT1H LTR MaLR 17 285 -305 259 238 60 0 chr2 108906068 108906157 -144350426 + MIR3 SINE MIR 102 197 -11 321 26 0 0 chr2 108906179 108906217 -144350366 + (CACCC)n Simple_repeat Simple_repeat 3 40 0 930 167 14 0 chr2 108908390 108908572 -144348011 - FRAM SINE Alu 0 183 1 655 183 91 74 chr2 108909117 108909292 -144347291 - MER45A DNA AcHobo 0 178 1 754 287 99 7 chr2 108910312 108910615 -144345968 + L1MC2 LINE L1 5272 5602 -2206 1145 202 44 4 chr2 108911018 108911266 -144345317 - ORSL DNA AcHobo -5 270 13 221 323 192 48 chr2 108911708 108911875 -144344708 + MIR SINE MIR 16 206 -56 2012 125 7 3 chr2 108911919 108912215 -144344368 + AluSq SINE Alu 1 297 -16 220 220 40 0 chr2 108912235 108912285 -144344298 + MIR SINE MIR 113 164 -98 553 129 69 43 chr2 108912502 108912618 -144343965 + MLT1A2 LTR MaLR 256 374 0 1643 174 0 39 chr2 108912847 108913158 -144343425 - AluJo SINE Alu -13 299 1 21 57 0 0 chr2 108913822 108913857 -144342726 + AT_rich Low_complexity Low_complexity 1 35 0 273 240 281 0 chr2 108914093 108914189 -144342394 + L2 LINE L2 3137 3259 -13 284 159 14 72 chr2 108918908 108918977 -144337606 + MLT1B LTR MaLR 112 176 -198 856 212 67 0 chr2 108919008 108919201 -144337382 + MLT1B LTR MaLR 181 386 -4 1070 211 49 12 chr2 108919429 108919676 -144336907 + L1MC2 LINE L1 6081 6336 -8 739 197 0 30 chr2 108920404 108920536 -144336047 + FLAM_C SINE Alu 3 130 -13 231 356 0 0 chr2 108920719 108920809 -144335774 + L1MC4a LINE L1 7298 7387 -421 1976 124 4 0 chr2 108920810 108921083 -144335500 + AluSx SINE Alu 33 306 -6 784 239 65 61 chr2 108921146 108921589 -144334994 + L1MC5 LINE L1 7330 7774 -187 1624 158 0 53 chr2 108921785 108922089 -144334494 + AluJo SINE Alu 3 290 -22 432 251 28 132 chr2 108922495 108922629 -144333954 + MIR SINE MIR 24 122 -140 2894 133 70 0 chr2 108922629 108923097 -144333486 + L1MB3 LINE L1 5682 6182 -1 432 251 28 132 chr2 108923097 108923213 -144333370 + MIR SINE MIR 122 248 -14 219 36 0 0 chr2 108923407 108923435 -144333148 + (TC)n Simple_repeat Simple_repeat 1 28 0 6448 213 16 18 chr2 108924088 108924622 -144331961 - L1 LINE L1 -813 5333 4799 360 0 0 0 chr2 108924622 108924662 -144331921 + (TTA)n Simple_repeat Simple_repeat 2 41 0 6448 213 16 18 chr2 108924662 108925604 -144330979 - L1 LINE L1 -1347 4799 3860 180 0 0 0 chr2 108925838 108925858 -144330725 + (T)n Simple_repeat Simple_repeat 1 20 0 26 50 0 0 chr2 108926674 108926714 -144329869 + AT_rich Low_complexity Low_complexity 1 40 0 2201 116 10 0 chr2 108927663 108927973 -144328610 + AluSq SINE Alu 1 313 0 270 272 69 44 chr2 108931835 108931987 -144324596 - MLT1J1 LTR MaLR -289 161 5 2271 104 0 0 chr2 108932019 108932317 -144324266 + AluSx SINE Alu 1 298 -14 2566 214 35 37 chr2 108932806 108933163 -144323420 + L1MB2 LINE L1 4859 5215 -956 2023 96 14 7 chr2 108933163 108933497 -144323086 + AluY SINE Alu 1 311 0 2566 214 35 37 chr2 108933497 108934269 -144322314 + L1MB2 LINE L1 5215 5985 -186 282 29 0 0 chr2 108934439 108934474 -144322109 + (GA)n Simple_repeat Simple_repeat 2 36 0 867 203 0 6 chr2 108934487 108934650 -144321933 - MLT1A2 LTR MaLR -212 162 1 276 204 125 23 chr2 108934772 108934860 -144321723 - MLT1I LTR MaLR -25 384 288 446 261 23 23 chr2 108935071 108935201 -144321382 - MLT1H LTR MaLR -330 219 90 202 300 40 0 chr2 108936147 108936197 -144320386 + MER5A DNA MER1_type 69 120 -69 206 321 58 92 chr2 108936388 108936628 -144319955 + L2 LINE L2 3031 3262 -10 232 170 85 0 chr2 108936867 108936914 -144319669 - LTR50 LTR ERVL 0 795 745 324 0 0 0 chr2 108938345 108938381 -144318202 + (TG)n Simple_repeat Simple_repeat 2 37 0 364 342 48 16 chr2 108938394 108938581 -144318002 + L3b LINE CR1 1261 1453 -130 254 294 164 23 chr2 108938721 108938898 -144317685 + MIR SINE MIR 61 262 0 1592 147 20 0 chr2 108938968 108939220 -144317363 + AluSg SINE Alu 42 298 -12 626 121 0 20 chr2 108939899 108939998 -144316585 + AluSg/x SINE Alu 211 307 -2 1936 115 10 22 chr2 108939998 108940310 -144316273 + L1MA4 LINE L1 5899 6206 -94 1009 295 99 62 chr2 108941808 108942404 -144314179 + HERVL LTR ERVL 3588 4205 -1449 627 310 59 29 chr2 108942419 108943019 -144313564 + HERVL LTR ERVL 4312 4982 -782 298 272 61 0 chr2 108943200 108943314 -144313269 + LTR67 LTR ERVL 420 540 -17 357 219 35 35 chr2 108943329 108943443 -144313140 + L1ME LINE L1 5566 5679 -442 2736 112 3 6 chr2 108944604 108944969 -144311614 + THE1B LTR MaLR 1 364 0 214 204 0 20 chr2 108945349 108945398 -144311185 - L2 LINE L2 -338 2976 2929 286 301 130 0 chr2 108945497 108945620 -144310963 - MIR SINE MIR -32 230 92 291 222 148 0 chr2 108946428 108946509 -144310074 + MER94 DNA DNA 1 93 -41 2379 65 0 0 chr2 108946564 108946843 -144309740 + AluY SINE Alu 16 294 -17 1776 243 89 22 chr2 108947183 108947689 -144308894 - MLT1F LTR MaLR -2 540 1 25 0 0 0 chr2 108947734 108947759 -144308824 + AT_rich Low_complexity Low_complexity 1 25 0 272 290 131 35 chr2 108947883 108948028 -144308555 + L2 LINE L2 3155 3313 0 198 103 0 0 chr2 108950826 108950855 -144305728 + (CACCAT)n Simple_repeat Simple_repeat 5 33 0 590 227 37 6 chr2 108951335 108951498 -144305085 + MLT1A2 LTR MaLR 2 169 -205 674 130 10 0 chr2 108951638 108951738 -144304845 + AluY SINE Alu 204 304 -7 659 298 6 0 chr2 108952041 108952199 -144304384 - MIR SINE MIR -96 166 8 1834 160 3 17 chr2 108952938 108953232 -144303351 + AluJo SINE Alu 1 290 -22 22 0 0 0 chr2 108953232 108953254 -144303329 + AT_rich Low_complexity Low_complexity 1 22 0 243 192 0 0 chr2 108953300 108953378 -144303205 + (CA)n Simple_repeat Simple_repeat 2 79 0 245 254 0 0 chr2 108953657 108953716 -144302867 - MLT1J1 LTR MaLR -284 162 104 254 208 19 0 chr2 108955625 108955678 -144300905 - MIR SINE MIR -61 147 94 666 218 16 62 chr2 108957583 108957776 -144298807 + MLT1J LTR MaLR 127 310 -201 355 301 0 0 chr2 108957918 108958011 -144298572 + MLT1J LTR MaLR 409 501 -10 431 264 70 23 chr2 108959831 108959960 -144296623 + L2 LINE L2 3138 3272 0 197 261 84 34 chr2 108960240 108960359 -144296224 + MIR SINE MIR 91 215 -47 2127 113 0 60 chr2 108960771 108961090 -144295493 - AluSx SINE Alu -12 300 1 417 197 0 0 chr2 108961190 108961261 -144295322 + L2 LINE L2 3237 3307 -6 340 288 194 0 chr2 108961590 108961750 -144294833 - MIR SINE MIR -48 214 24 202 154 26 0 chr2 108961775 108961814 -144294769 + (TAA)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr2 108962247 108962268 -144294315 + AT_rich Low_complexity Low_complexity 1 21 0 2142 98 24 0 chr2 108962586 108962873 -144293710 + AluSg SINE Alu 1 294 -16 6475 80 23 6 chr2 108962954 108963852 -144292731 - L1MA2 LINE L1 0 6304 5391 2803 157 35 14 chr2 108963953 108964130 -144292453 - L1 LINE L1 -1587 5978 5806 2286 101 0 3 chr2 108964130 108964436 -144292147 - AluSg SINE Alu -5 305 1 2803 157 35 14 chr2 108964436 108964768 -144291815 - L1 LINE L1 -1759 5806 5458 * 6464 162 25 21 chr2 108964735 108966067 -144290516 - L1 LINE L1 -2632 4933 3568 2186 107 7 3 chr2 108966067 108966366 -144290217 - AluSq SINE Alu -13 300 1 6464 162 25 21 chr2 108966366 108967372 -144289211 - L1 LINE L1 -3997 3568 2568 10054 181 28 7 chr2 108967477 108969236 -144287347 - L1 LINE L1 -5748 1817 22 259 335 134 10 chr2 108969626 108969837 -144286746 - L2 LINE L2 -219 3053 2826 206 313 149 22 chr2 108969850 108969984 -144286599 - L2 LINE L2 0 3272 3122 2459 131 25 8 chr2 108970256 108970614 -144285969 + THE1B LTR MaLR 1 364 0 1755 100 0 3 chr2 108970614 108970905 -144285678 + THE1B-int LTR MaLR 1 364 0 396 325 44 20 chr2 108970987 108971100 -144285483 - MIR SINE MIR -37 225 103 2491 50 3 3 chr2 108971100 108971398 -144285185 + L1PA5 LINE L1 5853 6150 -4 396 325 44 20 chr2 108971398 108971487 -144285096 - MIR SINE MIR -159 103 18 419 360 81 20 chr2 108971684 108972028 -144284555 + L1ME4a LINE L1 4767 5131 -1015 387 284 14 83 chr2 108972146 108972364 -144284219 + ERVL LTR ERVL 1664 1866 -3898 * 502 283 54 54 chr2 108972352 108972499 -144284084 + ERVL LTR ERVL 1775 1921 -3733 2127 121 0 0 chr2 108972499 108972780 -144283803 + AluSx SINE Alu 1 281 -31 216 0 0 0 chr2 108972784 108972808 -144283775 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 502 283 54 54 chr2 108972808 108972895 -144283688 + ERVL LTR ERVL 1923 2014 -3640 1284 311 84 16 chr2 108972921 108973490 -144283093 + ERVL LTR ERVL 2120 2727 -3037 306 297 42 25 chr2 108974849 108974967 -144281616 + ERVL LTR ERVL 792 911 -4853 234 0 0 0 chr2 108975249 108975275 -144281308 + (A)n Simple_repeat Simple_repeat 1 26 0 181 186 0 85 chr2 108976907 108976966 -144279617 - L2 LINE L2 -102 3211 3158 234 316 196 18 chr2 108977064 108977447 -144279136 + L2 LINE L2 1332 1782 -1532 313 163 0 0 chr2 108977464 108977513 -144279070 - MER45A DNA AcHobo -5 173 125 749 285 147 21 chr2 108977530 108978046 -144278537 - MER45C DNA AcHobo -353 600 20 32 17 0 52 chr2 108979467 108979501 -144277082 + AT_rich Low_complexity Low_complexity 1 32 -23 1569 179 10 21 chr2 108979501 108979791 -144276792 - AluJb SINE Alu -25 287 1 32 17 0 52 chr2 108979791 108979814 -144276769 + AT_rich Low_complexity Low_complexity 32 55 0 229 216 0 0 chr2 108979887 108979938 -144276645 + (TA)n Simple_repeat Simple_repeat 1 51 0 2023 133 0 3 chr2 108981348 108981642 -144274941 + AluJo SINE Alu 9 301 -11 225 296 0 14 chr2 108981885 108981956 -144274627 + CT-rich Low_complexity Low_complexity 3 72 0 1642 277 16 12 chr2 108983202 108983697 -144272886 + L1ME4a LINE L1 5487 5983 -138 454 321 51 5 chr2 108983707 108983903 -144272680 - MIR SINE MIR -17 245 41 256 143 156 26 chr2 108983936 108984013 -144272570 + L1ME4a LINE L1 6027 6113 -8 22 70 0 0 chr2 108985176 108985219 -144271364 + AT_rich Low_complexity Low_complexity 1 43 0 1832 149 69 66 chr2 108985325 108985393 -144271190 - MLT1A1 LTR MaLR 0 365 299 2156 122 26 0 chr2 108985393 108985696 -144270887 + AluSx SINE Alu 1 311 -1 1832 149 69 66 chr2 108985696 108985989 -144270594 - MLT1A1 LTR MaLR -66 299 3 192 77 0 0 chr2 108989074 108989100 -144267483 + (TTTTTG)n Simple_repeat Simple_repeat 2 27 0 1211 193 53 0 chr2 108990680 108990923 -144265660 + L1MB2 LINE L1 5908 6163 -8 231 280 178 0 chr2 108991388 108991495 -144265088 - L2 LINE L2 0 3313 3188 1906 100 73 0 chr2 108991602 108991863 -144264720 + AluSg SINE Alu 1 280 -30 270 151 0 0 chr2 108992375 108992428 -144264155 + Charlie7 DNA MER1_type 53 105 -2507 251 245 49 10 chr2 108992424 108992526 -144264057 + Charlie7 DNA MER1_type 2443 2548 -64 * 287 291 0 0 chr2 108992678 108992757 -144263826 + Charlie7 DNA MER1_type 2532 2610 -2 306 394 0 0 chr2 108993273 108993400 -144263183 + (CA)n Simple_repeat Simple_repeat 1 127 0 2334 101 0 0 chr2 108993516 108993813 -144262770 + AluSx SINE Alu 1 297 -15 301 208 42 14 chr2 108994005 108994077 -144262506 - L1ME LINE L1 -371 5795 5722 316 311 73 36 chr2 108994092 108994340 -144262243 - L1ME LINE L1 -448 5673 5417 881 209 11 28 chr2 108995126 108995308 -144261275 - MER58A DNA MER1_type 0 224 46 1487 146 74 128 chr2 108995316 108995721 -144260862 + L1MB5 LINE L1 5792 6174 0 503 295 36 26 chr2 108995965 108996158 -144260425 - MLT1J2 LTR MaLR 0 450 256 418 223 11 0 chr2 108996209 108996303 -144260280 - MER5A DNA MER1_type -86 103 9 267 272 69 44 chr2 108996392 108996544 -144260039 - MLT1J1 LTR MaLR -289 161 5 2280 107 0 0 chr2 108996576 108996874 -144259709 + AluSx SINE Alu 1 298 -14 5131 146 43 22 chr2 108997363 108997720 -144258863 + L1MB2 LINE L1 4859 5207 -964 2410 77 0 3 chr2 108997720 108998044 -144258539 + AluY SINE Alu 1 311 0 5131 146 43 22 chr2 108998044 108998977 -144257606 + L1MB2 LINE L1 5207 6171 0 1832 175 26 0 chr2 108998984 108999287 -144257296 + AluJo SINE Alu 1 311 -1 521 247 23 23 chr2 108999632 108999806 -144256777 + MER5B DNA MER1_type 5 178 0 279 217 0 72 chr2 108999817 108999886 -144256697 + MER69 DNA AcHobo 3 66 -111 503 239 35 0 chr2 109000012 109000154 -144256429 + MER69 DNA AcHobo 2380 2526 0 392 228 11 0 chr2 109000749 109000841 -144255742 - MER5B DNA MER1_type -85 93 1 403 220 206 0 chr2 109000908 109001049 -144255534 - MER5B DNA MER1_type 0 178 9 202 114 29 0 chr2 109001290 109001325 -144255258 + GA-rich Low_complexity Low_complexity 1 36 0 330 222 231 8 chr2 109002159 109002276 -144254307 + MER5A DNA MER1_type 42 184 -5 316 337 20 0 chr2 109002398 109002496 -144254087 - MIR3 SINE MIR -19 189 90 2063 128 14 0 chr2 109002772 109003105 -144253478 - AluSx SINE Alu 0 312 1 321 26 0 0 chr2 109003984 109004022 -144252561 + (GA)n Simple_repeat Simple_repeat 2 39 0 643 265 6 0 chr2 109004930 109005092 -144251491 + MER5A DNA MER1_type 8 170 -19 367 266 44 0 chr2 109005611 109005724 -144250859 + MLT1I LTR MaLR 280 397 -12 210 240 0 20 chr2 109006256 109006306 -144250277 + CT-rich Low_complexity Low_complexity 3 51 0 221 298 0 0 chr2 109007676 109007733 -144248850 + GA-rich Low_complexity Low_complexity 1 57 0 198 71 0 0 chr2 109007922 109007950 -144248633 + (A)n Simple_repeat Simple_repeat 1 28 0 59 65 0 0 chr2 109008205 109008313 -144248270 + AT_rich Low_complexity Low_complexity 1 108 0 904 279 55 32 chr2 109008970 109009350 -144247233 + L2 LINE L2 2924 3312 -1 2278 126 3 0 chr2 109009501 109009811 -144246772 - AluSx SINE Alu -1 311 1 371 221 194 78 chr2 109009987 109010204 -144246379 - MLT1J LTR MaLR -269 242 1 307 320 47 7 chr2 109010612 109010762 -144245821 + MIR SINE MIR 57 212 -50 1760 164 0 33 chr2 109010784 109011088 -144245495 + AluJo SINE Alu 1 294 -18 192 77 0 0 chr2 109011964 109011990 -144244593 + (T)n Simple_repeat Simple_repeat 1 26 0 373 262 33 0 chr2 109013311 109013433 -144243150 - LTR33 LTR ERVL 0 521 396 272 344 83 19 chr2 109014457 109014614 -144241969 + L2 LINE L2 3146 3312 -1 2123 124 7 3 chr2 109016400 109016699 -144239884 - AluSq SINE Alu -11 302 3 275 281 94 64 chr2 109017708 109017879 -144238704 - MIR SINE MIR -12 250 75 268 182 91 0 chr2 109019571 109019637 -144236946 + MIR SINE MIR 113 184 -78 203 0 37 0 chr2 109020146 109020173 -144236410 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 440 306 92 46 chr2 109020195 109020479 -144236104 + L3 LINE CR1 1023 1325 -252 2211 111 0 0 chr2 109020479 109020768 -144235815 + AluSx SINE Alu 19 307 -5 440 306 92 46 chr2 109020768 109020810 -144235773 + L3 LINE CR1 1325 1364 -213 1741 197 98 40 chr2 109021351 109021828 -144234755 - MLT1D LTR MaLR 0 505 1 2437 125 24 8 chr2 109022765 109023134 -144233449 + THE1C LTR MaLR 1 375 0 251 296 127 0 chr2 109023981 109024102 -144232481 + MIR SINE MIR 18 153 -62 1140 202 32 9 chr2 109024604 109024822 -144231761 - MER58A DNA MER1_type 0 224 2 217 328 74 25 chr2 109026087 109026209 -144230374 - L2 LINE L2 -20 3252 3125 1810 209 43 0 chr2 109026460 109026810 -144229773 + MLT1A1 LTR MaLR 1 365 0 25 0 0 0 chr2 109027078 109027103 -144229480 + AT_rich Low_complexity Low_complexity 1 25 0 802 286 14 3 chr2 109027518 109027805 -144228778 + L1ME3A LINE L1 3619 3908 -2238 1998 249 78 67 chr2 109027817 109028120 -144228463 + L1ME3A LINE L1 4853 5151 -1019 1852 165 0 37 chr2 109028120 109028441 -144228142 + AluJb SINE Alu 1 309 -3 1998 249 78 67 chr2 109028441 109029026 -144227557 + L1ME3A LINE L1 5151 5750 -420 1892 113 26 71 chr2 109029026 109029335 -144227248 + AluJb SINE Alu 3 297 -15 1998 249 78 67 chr2 109029335 109029733 -144226850 + L1ME3A LINE L1 5750 6142 -28 240 86 0 0 chr2 109031130 109031165 -144225418 + (A)n Simple_repeat Simple_repeat 1 35 0 359 278 126 31 chr2 109032098 109032289 -144224294 - MIR SINE MIR -6 256 48 284 301 114 0 chr2 109033856 109033979 -144222604 + L2 LINE L2 3099 3235 -37 432 110 22 11 chr2 109035766 109035857 -144220726 + (CCG)n Simple_repeat Simple_repeat 3 94 0 37 0 0 0 chr2 109036784 109036821 -144219762 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr2 109037834 109037855 -144218728 + AT_rich Low_complexity Low_complexity 1 21 0 261 0 0 0 chr2 109039481 109039510 -144217073 + (T)n Simple_repeat Simple_repeat 1 29 0 38 39 0 0 chr2 109039716 109039768 -144216815 + AT_rich Low_complexity Low_complexity 1 52 0 291 114 0 0 chr2 109040437 109040481 -144216102 + (TTG)n Simple_repeat Simple_repeat 1 44 0 432 0 0 0 chr2 109041886 109041934 -144214649 + (TTA)n Simple_repeat Simple_repeat 2 49 0 2185 119 0 0 chr2 109042799 109043102 -144213481 - AluSx SINE Alu -9 303 1 208 194 51 31 chr2 109043622 109043665 -144212918 + (TA)n Simple_repeat Simple_repeat 2 43 -58 2182 104 3 7 chr2 109043665 109043974 -144212609 + AluSx SINE Alu 1 308 -4 208 194 51 31 chr2 109043974 109044028 -144212555 + (TA)n Simple_repeat Simple_repeat 43 101 0 405 315 71 23 chr2 109044754 109045108 -144211475 + L1ME4a LINE L1 5327 5699 -422 273 284 114 8 chr2 109045182 109045446 -144211137 + L1ME4a LINE L1 5830 6121 0 328 256 37 0 chr2 109045519 109045601 -144210982 - L2 LINE L2 0 3313 3229 226 228 105 0 chr2 109046400 109046457 -144210126 - tRNA-Ile-ATT tRNA tRNA -13 64 2 417 271 53 62 chr2 109047549 109047774 -144208809 + MIR SINE MIR 37 259 -3 22 0 0 0 chr2 109048419 109048441 -144208142 + AT_rich Low_complexity Low_complexity 1 22 0 2057 110 0 28 chr2 109049580 109049898 -144206685 + AluSg SINE Alu 2 310 0 270 116 0 0 chr2 109050098 109050141 -144206442 + (ATGGTG)n Simple_repeat Simple_repeat 1 43 0 1302 78 0 0 chr2 109050183 109050363 -144206220 + (TGG)n Simple_repeat Simple_repeat 1 180 0 687 215 0 0 chr2 109050390 109050562 -144206021 + (ATGGTG)n Simple_repeat Simple_repeat 5 176 0 1295 251 33 21 chr2 109051071 109051405 -144205178 + MLT1I LTR MaLR 72 409 0 279 236 146 27 chr2 109052487 109052597 -144203986 - MIR SINE MIR -77 185 63 1893 127 3 41 chr2 109053127 109053443 -144203140 + AluSg SINE Alu 1 304 -6 2377 70 0 6 chr2 109055011 109055323 -144201260 + AluY SINE Alu 1 310 -1 2003 123 27 0 chr2 109056194 109056495 -144200088 + AluSc SINE Alu 1 309 0 2113 113 7 0 chr2 109056523 109056823 -144199760 - AluSx SINE Alu -10 302 1 434 242 38 23 chr2 109059260 109059392 -144197191 - MIR3 SINE MIR -9 199 66 198 103 0 0 chr2 109059868 109059897 -144196686 + (T)n Simple_repeat Simple_repeat 1 29 0 377 268 109 48 chr2 109061139 109061378 -144195205 + MIR SINE MIR 17 262 0 180 125 0 0 chr2 109062743 109062775 -144193808 + (T)n Simple_repeat Simple_repeat 1 32 0 22 56 0 0 chr2 109063712 109063748 -144192835 + AT_rich Low_complexity Low_complexity 1 36 0 270 165 24 35 chr2 109065016 109065101 -144191482 + GA-rich Low_complexity Low_complexity 1 84 0 214 182 45 57 chr2 109066864 109066952 -144189631 + (TATATG)n Simple_repeat Simple_repeat 2 88 0 204 40 0 0 chr2 109068475 109068500 -144188083 + (CCCTG)n Simple_repeat Simple_repeat 5 29 0 23 33 0 0 chr2 109069029 109069059 -144187524 + GC_rich Low_complexity Low_complexity 1 30 0 183 167 0 0 chr2 109070713 109070755 -144185828 + (CATG)n Simple_repeat Simple_repeat 1 42 0 25 31 0 0 chr2 109072521 109072553 -144184030 + AT_rich Low_complexity Low_complexity 1 32 0 297 0 0 0 chr2 109072886 109072919 -144183664 + (CAT)n Simple_repeat Simple_repeat 2 34 0 216 0 0 0 chr2 109078581 109078605 -144177978 + (CACCC)n Simple_repeat Simple_repeat 3 26 0 333 0 0 0 chr2 109078795 109078832 -144177751 + (CA)n Simple_repeat Simple_repeat 1 37 0 234 91 55 18 chr2 109079054 109079109 -144177474 + GA-rich Low_complexity Low_complexity 2 58 0 217 291 0 24 chr2 109079521 109079598 -144176985 + CT-rich Low_complexity Low_complexity 1 75 0 237 263 0 0 chr2 109079669 109079726 -144176857 + G-rich Low_complexity Low_complexity 1 57 0 294 164 0 0 chr2 109080011 109080066 -144176517 + GA-rich Low_complexity Low_complexity 1 55 0 207 0 0 0 chr2 109080669 109080692 -144175891 + (GGAGA)n Simple_repeat Simple_repeat 4 26 0 186 71 0 0 chr2 109081026 109081054 -144175529 + (CTG)n Simple_repeat Simple_repeat 1 28 0 422 148 8 23 chr2 109081110 109081238 -144175345 + G-rich Low_complexity Low_complexity 1 126 0 274 145 40 40 chr2 109081240 109081316 -144175267 + (CGG)n Simple_repeat Simple_repeat 3 78 0 255 31 0 0 chr2 109089320 109089352 -144167231 + (CA)n Simple_repeat Simple_repeat 2 33 0 4221 160 12 18 chr2 109092072 109092833 -144163750 - L1MB3 LINE L1 -2 6181 5426 2133 95 0 3 chr2 109092949 109093278 -144163305 - AluSx SINE Alu 0 328 1 2340 84 3 0 chr2 109094908 109095216 -144161367 - AluSc SINE Alu 0 309 1 318 104 62 42 chr2 109096109 109096374 -144160209 + (CA)n Simple_repeat Simple_repeat 1 270 0 217 174 58 29 chr2 109096406 109096475 -144160108 + (CA)n Simple_repeat Simple_repeat 2 72 0 1319 203 16 38 chr2 109098356 109098722 -144157861 - AluJo SINE Alu 0 363 5 293 149 15 0 chr2 109098770 109098837 -144157746 + CT-rich Low_complexity Low_complexity 2 69 0 2155 101 0 16 chr2 109099504 109099811 -144156772 - AluSx SINE Alu -9 303 2 185 0 0 39 chr2 109100637 109100663 -144155920 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 203 279 29 29 chr2 109102324 109102392 -144154191 + L3b LINE CR1 1299 1366 -217 4276 123 16 0 chr2 109102548 109103048 -144153535 + MER41B LTR ERV1 1 514 -121 2164 113 3 0 chr2 109103048 109103357 -144153226 - AluSq SINE Alu -3 310 1 4276 123 16 0 chr2 109103357 109103481 -144153102 + MER41B LTR ERV1 514 635 0 1568 210 40 15 chr2 109103481 109103769 -144152814 + MER7A DNA MER2_type 1 297 -2741 4067 88 12 42 chr2 109103769 109103886 -144152697 - MER41A LTR ERV1 0 554 435 2000 119 10 13 chr2 109103886 109104197 -144152386 + AluSp SINE Alu 1 310 -3 4067 88 12 42 chr2 109104197 109104650 -144151933 - MER41A LTR ERV1 -119 435 1 1568 210 40 15 chr2 109104650 109104685 -144151898 + MER7A DNA MER2_type 297 330 -16 334 272 53 65 chr2 109106346 109106436 -144150147 - MIR SINE MIR -19 243 154 1875 162 24 12 chr2 109106436 109106775 -144149808 - MER61A LTR ERV1 0 343 1 334 272 53 65 chr2 109106775 109106853 -144149730 - MIR SINE MIR -108 154 77 1698 143 34 5 chr2 109107363 109107661 -144148922 + MER61B LTR ERV1 2 396 -29 595 280 59 38 chr2 109108197 109108436 -144148147 + MIR SINE MIR 13 256 -6 30 59 0 0 chr2 109108590 109108641 -144147942 + AT_rich Low_complexity Low_complexity 1 51 0 1088 130 0 0 chr2 109109705 109109897 -144146686 - AluJb SINE Alu 0 321 130 249 213 125 0 chr2 109109897 109109977 -144146606 + L1MC4 LINE L1 6614 6703 -1339 523 194 0 57 chr2 109109999 109110123 -144146460 - FLAM_C SINE Alu -16 117 1 2275 85 0 3 chr2 109110860 109111165 -144145418 + AluSq SINE Alu 1 304 -9 332 317 28 21 chr2 109111271 109111413 -144145170 + MIR SINE MIR 3 145 -117 309 26 0 0 chr2 109112319 109112357 -144144226 + (TG)n Simple_repeat Simple_repeat 2 39 0 233 315 18 27 chr2 109114439 109114550 -144142033 - MIR SINE MIR -62 146 37 1435 202 33 44 chr2 109115246 109115607 -144140976 + MLT1A1 LTR MaLR 7 363 -2 221 230 14 0 chr2 109119328 109119402 -144137181 + CT-rich Low_complexity Low_complexity 1 75 0 1917 209 58 9 chr2 109122764 109123209 -144133374 - MLT1C LTR MaLR 0 467 1 292 285 97 65 chr2 109123598 109124043 -144132540 - L1M4 LINE L1 -1310 4836 4378 348 307 41 103 chr2 109124362 109124779 -144131804 + L2 LINE L2 2877 3267 -46 346 299 59 102 chr2 109124937 109125493 -144131090 - L1M4 LINE L1 -1903 4243 3712 225 214 0 0 chr2 109126183 109126225 -144130358 + T-rich Low_complexity Low_complexity 1 42 0 448 294 52 82 chr2 109127711 109127905 -144128678 + MIR SINE MIR 70 257 -5 1232 192 64 64 chr2 109128026 109128370 -144128213 - MER2 DNA MER2_type 0 344 1 2028 96 20 23 chr2 109128392 109128695 -144127888 + AluSx SINE Alu 1 302 -10 260 89 0 22 chr2 109129074 109129119 -144127464 + (GA)n Simple_repeat Simple_repeat 1 44 0 25 0 0 0 chr2 109129175 109129200 -144127383 + AT_rich Low_complexity Low_complexity 1 25 0 259 323 0 0 chr2 109129462 109129524 -144127059 + L2 LINE L2 3210 3271 -1 269 174 0 130 chr2 109130951 109131043 -144125540 - L1ME3A LINE L1 0 6170 6091 273 313 25 0 chr2 109133508 109133588 -144122995 - L2 LINE L2 -2 3270 3189 715 249 92 50 chr2 109133588 109134041 -144122542 - MLT1F LTR MaLR 0 593 3 2549 172 40 46 chr2 109134063 109134581 -144122002 + MLT2B2 LTR ERVL 1 515 0 221 277 102 51 chr2 109134742 109134919 -144121664 - L2 LINE L2 -208 3064 2879 225 281 66 50 chr2 109134938 109135059 -144121524 - MLT1J LTR MaLR -54 457 335 424 269 19 0 chr2 109135207 109135311 -144121272 - MLT1J LTR MaLR -350 161 56 2584 162 40 2 chr2 109135608 109136058 -144120525 + MLT1C LTR MaLR 1 467 0 1692 165 28 3 chr2 109136141 109136432 -144120151 - AluSp SINE Alu -15 298 1 302 239 23 15 chr2 109136993 109137123 -144119460 + CT-rich Low_complexity Low_complexity 2 132 0 270 56 0 0 chr2 109137250 109137286 -144119297 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 2050 116 0 0 chr2 109137290 109137575 -144119008 - AluSx SINE Alu -27 285 1 642 306 148 16 chr2 109138040 109138425 -144118158 - MLT1J LTR MaLR -65 446 11 9783 161 136 22 chr2 109138555 109138976 -144117607 + L1M4c LINE L1 18 389 -5993 2104 133 0 3 chr2 109138976 109139270 -144117313 + AluSg SINE Alu 1 293 -17 9783 161 136 22 chr2 109139270 109141140 -144115443 + L1M4c LINE L1 389 2572 -3810 1577 165 24 0 chr2 109141140 109141431 -144115152 + L1MB3 LINE L1 5879 6176 -7 264 341 62 16 chr2 109141531 109141660 -144114923 - L2 LINE L2 -527 2787 2653 261 312 130 52 chr2 109142834 109143103 -144113480 + L3b LINE CR1 1111 1400 -183 1399 184 67 48 chr2 109143137 109143293 -144113290 - MLT1A1 LTR MaLR 0 365 214 6875 59 10 9 chr2 109143293 109144362 -144112221 + L1PA7 LINE L1 5070 6139 -15 1399 184 67 48 chr2 109144362 109144563 -144112020 - MLT1A1 LTR MaLR -151 214 1 1526 216 33 7 chr2 109144733 109145034 -144111549 + AluJo SINE Alu 1 309 -3 291 247 26 139 chr2 109145117 109145311 -144111272 - MIR SINE MIR -68 194 23 1865 46 5 0 chr2 109146007 109146226 -144110357 - AluY SINE Alu 0 311 92 1791 139 3 28 chr2 109146224 109146512 -144110071 - AluSx SINE Alu -31 281 1 * 652 167 130 0 chr2 109151205 109151343 -144105240 + FRAM SINE Alu 1 153 -23 25 0 0 0 chr2 109151349 109151374 -144105209 + AT_rich Low_complexity Low_complexity 1 25 0 29 28 0 0 chr2 109154713 109154749 -144101834 + AT_rich Low_complexity Low_complexity 1 36 0 1532 181 14 4 chr2 109156199 109156480 -144100103 - AluJo SINE Alu -24 288 5 2154 85 35 0 chr2 109158479 109158761 -144097822 - AluSp SINE Alu -19 294 3 302 239 23 15 chr2 109159324 109159454 -144097129 + CT-rich Low_complexity Low_complexity 2 132 0 270 56 0 0 chr2 109159581 109159617 -144096966 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 2141 116 0 0 chr2 109159621 109159906 -144096677 - AluSx SINE Alu -27 285 1 407 292 162 0 chr2 109160132 109160286 -144096297 - L2 LINE L2 -1035 2279 2101 567 112 0 20 chr2 109160321 109160419 -144096164 - L1MC1 LINE L1 -165 6168 6073 26 0 0 0 chr2 109160419 109160445 -144096138 + AT_rich Low_complexity Low_complexity 1 26 0 925 121 69 82 chr2 109160453 109160539 -144096044 - L1MB1 LINE L1 0 6168 6082 2152 128 3 0 chr2 109160539 109160844 -144095739 + AluSx SINE Alu 1 306 -6 925 121 69 82 chr2 109160844 109160989 -144095594 - L1MB1 LINE L1 -86 6082 5940 1569 142 24 14 chr2 109160999 109161288 -144095295 + L1M3 LINE L1 5484 5775 -393 13981 125 40 13 chr2 109161288 109162789 -144093794 + Tigger1 DNA MER2_type 6 1596 -822 998 84 14 0 chr2 109162789 109162932 -144093651 + L1PA13 LINE L1 6000 6144 -19 13981 125 40 13 chr2 109162932 109163776 -144092807 + Tigger1 DNA MER2_type 1596 2415 -3 237 65 0 0 chr2 109163777 109163808 -144092775 + (TG)n Simple_repeat Simple_repeat 2 32 0 302 188 62 0 chr2 109163842 109163906 -144092677 - MLT1A2 LTR MaLR 0 374 307 718 137 0 0 chr2 109164006 109164108 -144092475 - AluSq/x SINE Alu -209 104 3 3779 181 6 0 chr2 109164109 109164878 -144091705 - L1MEc LINE L1 -3266 2880 2146 23 0 0 0 chr2 109165209 109165232 -144091351 + AT_rich Low_complexity Low_complexity 1 23 0 503 267 47 33 chr2 109166493 109166643 -144089940 + MER5B DNA MER1_type 21 172 -6 597 130 0 20 chr2 109166934 109167034 -144089549 + AluSg/x SINE Alu 212 309 0 6797 140 28 38 chr2 109167047 109167061 -144089522 + L1M4c LINE L1 1082 1095 -5287 2196 136 0 3 chr2 109167061 109167371 -144089212 + AluSx SINE Alu 1 309 -3 6797 140 28 38 chr2 109167371 109168621 -144087962 + L1M4c LINE L1 1095 2334 -4048 2332 112 0 6 chr2 109168621 109168935 -144087648 + AluSx SINE Alu 1 312 0 6797 140 28 38 chr2 109168935 109169151 -144087432 + L1M4c LINE L1 2334 2551 -3831 2743 142 2 19 chr2 109169151 109169636 -144086947 + L1MB3 LINE L1 5700 6176 -7 303 28 0 0 chr2 109169974 109170010 -144086573 + (TG)n Simple_repeat Simple_repeat 1 36 0 332 80 0 0 chr2 109171092 109171142 -144085441 - MADE1 DNA Mariner -3 77 28 429 218 40 10 chr2 109171263 109171364 -144085219 - L2 LINE L2 -2 3311 3208 248 231 44 77 chr2 109171493 109171584 -144084999 - L2 LINE L2 0 3313 3226 243 333 12 12 chr2 109171631 109171712 -144084871 + LTR67 LTR ERVL 120 200 -357 23 0 0 0 chr2 109172131 109172154 -144084429 + AT_rich Low_complexity Low_complexity 1 23 0 349 306 0 0 chr2 109173829 109173937 -144082646 + MIR SINE MIR 115 222 -40 2083 126 7 0 chr2 109173959 109174268 -144082315 - AluSq SINE Alu 0 313 3 2128 108 0 69 chr2 109174478 109174812 -144081771 + AluSx SINE Alu 1 311 -1 2305 107 0 3 chr2 109174834 109175144 -144081439 + AluSq SINE Alu 1 309 -4 446 256 137 0 chr2 109175673 109175790 -144080793 - FLAM_A SINE Alu 0 133 1 21 0 0 0 chr2 109175796 109175817 -144080766 + AT_rich Low_complexity Low_complexity 1 21 0 2080 164 3 15 chr2 109176376 109176717 -144079866 - MER1B DNA MER1_type 0 337 1 2057 144 9 68 chr2 109176832 109177084 -144079499 + L1MB3 LINE L1 5621 5839 -344 5692 118 21 3 chr2 109177084 109178529 -144078054 + L1PA16 LINE L1 4697 6162 -4 2057 144 9 68 chr2 109178529 109178700 -144077883 + L1MB3 LINE L1 5839 6019 -164 27 49 0 0 chr2 109178700 109178741 -144077842 + AT_rich Low_complexity Low_complexity 1 41 0 1821 106 0 0 chr2 109178744 109178981 -144077602 - AluSx SINE Alu -75 237 1 1009 143 6 0 chr2 109178981 109179149 -144077434 + L1MB3 LINE L1 6005 6173 -10 297 253 107 0 chr2 109179313 109179388 -144077195 - MER5A DNA MER1_type -61 128 46 1520 233 148 23 chr2 109179393 109179437 -144077146 - MLT1F1 LTR MaLR -6 561 524 2526 152 29 9 chr2 109179437 109179857 -144076726 + MSTA LTR MaLR 1 428 0 1520 233 148 23 chr2 109179857 109180293 -144076290 - MLT1F1 LTR MaLR -43 524 21 3311 83 34 0 chr2 109180293 109180763 -144075820 - LTR19A LTR ERV1 0 486 1 1371 244 78 12 chr2 109180794 109181217 -144075366 - MLT1C LTR MaLR -9 458 8 323 143 0 0 chr2 109181217 109181266 -144075317 - MER5A DNA MER1_type -140 49 1 265 358 30 30 chr2 109181266 109181415 -144075168 - MIR3 SINE MIR -53 155 7 539 313 138 12 chr2 109182040 109182452 -144074131 - L1ME3A LINE L1 -219 5951 5488 2415 87 0 3 chr2 109182636 109182948 -144073635 - AluSq SINE Alu -2 311 1 519 169 8 65 chr2 109183685 109183809 -144072774 + FLAM_C SINE Alu 1 117 -16 235 213 125 0 chr2 109183831 109183911 -144072672 - L1MC4 LINE L1 -1339 6703 6614 1150 130 0 0 chr2 109183911 109184103 -144072480 + AluJb SINE Alu 130 321 0 30 59 0 0 chr2 109185167 109185218 -144071365 + AT_rich Low_complexity Low_complexity 1 51 0 546 280 59 38 chr2 109185372 109185611 -144070972 - MIR SINE MIR -6 256 13 1522 130 24 5 chr2 109186154 109186441 -144070142 - MER61B LTR ERV1 -36 389 2 403 287 66 0 chr2 109187863 109187999 -144068584 + MIR SINE MIR 118 262 0 1951 126 87 0 chr2 109188031 109188317 -144068266 - AluSx SINE Alu -1 311 1 2181 142 24 0 chr2 109188403 109188776 -144067807 - MLT1B LTR MaLR -8 382 1 2350 153 18 18 chr2 109188864 109188883 -144067700 + L1MA6 LINE L1 5849 6300 0 2380 159 14 19 chr2 109188883 109189316 -144067267 + L1MA6 LINE L1 5870 6300 0 211 132 0 26 chr2 109190485 109190523 -144066060 + (GAAAA)n Simple_repeat Simple_repeat 4 40 0 451 250 74 66 chr2 109191763 109192007 -144064576 + MIR SINE MIR 8 253 -9 2154 77 18 0 chr2 109192565 109192940 -144063643 + AluSc SINE Alu 1 380 0 936 211 54 2 chr2 109194254 109194474 -144062109 - L1MD3 LINE L1 -11 7984 6087 302 193 51 57 chr2 109196993 109197115 -144059468 - L1MC5 LINE L1 0 7995 7822 2458 191 43 18 chr2 109197167 109197539 -144059044 - L1MB2 LINE L1 -1 6406 6014 315 0 0 0 chr2 109197539 109197574 -144059009 + (CA)n Simple_repeat Simple_repeat 1 35 0 2458 191 43 18 chr2 109197574 109197765 -144058818 - L1MB2 LINE L1 -393 6014 5829 260 56 56 0 chr2 109197768 109197804 -144058779 - MER58A DNA MER1_type -28 79 42 2444 214 45 50 chr2 109197816 109198147 -144058436 + L1ME LINE L1 4672 5003 -1163 2135 132 3 7 chr2 109198147 109198457 -144058126 + AluSx SINE Alu 1 309 -3 2444 214 45 50 chr2 109198457 109199239 -144057344 + L1ME LINE L1 5003 5792 -374 39277 83 7 7 chr2 109199306 109205449 -144051134 - L1PA6 LINE L1 0 6154 11 9319 239 40 24 chr2 109205459 109207953 -144048630 - L1MB2 LINE L1 -562 5845 3394 2378 81 0 3 chr2 109207953 109208251 -144048332 - AluY SINE Alu -14 297 1 9319 239 40 24 chr2 109208251 109209051 -144047532 - L1MB2 LINE L1 -3013 3394 2374 2192 116 0 0 chr2 109209051 109209345 -144047238 - AluY SINE Alu -17 294 1 9319 239 40 24 chr2 109209345 109209674 -144046909 - L1MB2 LINE L1 -4033 2374 2052 1140 206 77 82 chr2 109209687 109210027 -144046556 - MER2 DNA MER2_type -7 338 1 3286 232 29 6 chr2 109210113 109210918 -144045665 - L1MB2 LINE L1 -4513 1871 1049 1102 190 5 25 chr2 109210918 109211152 -144045431 - AluJb SINE Alu 0 316 87 694 272 16 107 chr2 109211152 109211360 -144045223 - L1M3c LINE L1 -4841 1300 1151 746 196 8 23 chr2 109211360 109211493 -144045090 - FLAM_A SINE Alu -1 132 2 694 272 16 107 chr2 109211493 109211722 -144044861 - L1M3c LINE L1 -4990 1151 903 965 303 42 32 chr2 109211848 109212248 -144044335 - L1M3c LINE L1 -5487 644 241 1429 215 83 20 chr2 109212254 109212701 -144043882 - L1MC5 LINE L1 -177 7784 7310 371 220 50 64 chr2 109213144 109213285 -144043298 + MLT1L LTR MaLR 180 318 -297 323 287 74 16 chr2 109213362 109213484 -144043099 + MLT1L LTR MaLR 479 607 -8 858 272 107 67 chr2 109215293 109215771 -144040812 + LTR33 LTR ERVL 25 521 0 2290 107 0 0 chr2 109215997 109216296 -144040287 + AluSx SINE Alu 1 299 -13 21 0 0 0 chr2 109217146 109217167 -144039416 + AT_rich Low_complexity Low_complexity 1 21 0 192 158 0 0 chr2 109217413 109217451 -144039132 + (TTCA)n Simple_repeat Simple_repeat 1 38 0 203 327 71 54 chr2 109217638 109217806 -144038777 - L2 LINE L2 -169 3103 2933 551 314 295 7 chr2 109217816 109218422 -144038161 + L2 LINE L2 2052 2832 -482 595 298 90 48 chr2 109218450 109218782 -144037801 + L2 LINE L2 2967 3312 -1 27 0 0 0 chr2 109219390 109219417 -144037166 + AT_rich Low_complexity Low_complexity 1 27 0 2153 102 0 23 chr2 109219584 109219887 -144036696 - AluSx SINE Alu -16 296 1 699 231 63 46 chr2 109220140 109220407 -144036176 + MLT1G1 LTR MaLR 11 321 -274 368 265 139 47 chr2 109220551 109220863 -144035720 - MLT1G LTR MaLR -240 350 13 196 324 90 9 chr2 109220879 109220990 -144035593 - L2 LINE L2 -538 2776 2657 2153 71 4 7 chr2 109221247 109221569 -144035014 + AluY SINE Alu 1 321 0 244 322 111 33 chr2 109221982 109222162 -144034421 - MIR SINE MIR -34 228 35 1734 197 323 2 chr2 109222689 109223289 -144033294 - LTR50 LTR ERVL 0 795 3 222 322 50 8 chr2 109224292 109224413 -144032170 + L2 LINE L2 2511 2636 -678 331 143 0 0 chr2 109224413 109224462 -144032121 - MLT2B1 LTR ERVL 0 464 416 204 135 0 0 chr2 109224476 109224513 -144032070 + (TCTA)n Simple_repeat Simple_repeat 2 38 0 204 40 0 0 chr2 109224536 109224561 -144032022 + (TA)n Simple_repeat Simple_repeat 1 25 0 237 272 14 14 chr2 109224580 109224727 -144031856 + (TA)n Simple_repeat Simple_repeat 1 147 0 315 0 0 0 chr2 109224753 109224788 -144031795 + (TA)n Simple_repeat Simple_repeat 2 36 0 297 0 0 0 chr2 109224787 109224820 -144031763 + (GA)n Simple_repeat Simple_repeat 2 34 0 * 2470 198 22 2 chr2 109224820 109225264 -144031319 - MLT2B1 LTR ERVL -65 455 3 590 359 46 8 chr2 109225266 109225528 -144031055 + L2 LINE L2 2632 2903 -411 1233 38 0 32 chr2 109225613 109225799 -144030784 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 544 300 86 46 chr2 109226562 109226842 -144029741 + L2 LINE L2 3019 3309 -4 1916 173 40 28 chr2 109227709 109228101 -144028482 - MLT1A1 LTR MaLR 0 365 1 2217 106 10 0 chr2 109228495 109228797 -144027786 - AluSq SINE Alu -8 305 1 1474 98 6 0 chr2 109229751 109229934 -144026649 + AluSx SINE Alu 3 186 -126 301 196 11 11 chr2 109230037 109230129 -144026454 + (CCA)n Simple_repeat Simple_repeat 1 92 0 487 287 95 38 chr2 109230259 109230448 -144026135 - MLT1L LTR MaLR -4 611 434 1711 214 11 19 chr2 109230448 109230813 -144025770 + MLT1A1 LTR MaLR 4 365 0 487 287 95 38 chr2 109230813 109230899 -144025684 - MLT1L LTR MaLR -181 434 239 239 224 66 53 chr2 109232418 109232494 -144024089 - L2 LINE L2 0 3272 3196 2384 103 0 0 chr2 109232888 109233189 -144023394 + AluSx SINE Alu 1 301 -11 367 274 52 49 chr2 109233244 109233410 -144023173 + MIR SINE MIR 20 184 -58 24 0 0 0 chr2 109233581 109233605 -144022978 + AT_rich Low_complexity Low_complexity 1 24 0 3701 64 70 10 chr2 109233605 109234090 -144022493 + L1PA8 LINE L1 5657 6170 -2 1426 175 97 15 chr2 109234445 109234714 -144021869 + AluJo SINE Alu 1 291 -21 1392 244 96 90 chr2 109235482 109235776 -144020807 - L2 LINE L2 0 3313 3022 2205 105 10 19 chr2 109235776 109236089 -144020494 - AluSg SINE Alu 0 310 1 1392 244 96 90 chr2 109236089 109236741 -144019842 - L2 LINE L2 -291 3022 2362 484 102 11 91 chr2 109236843 109236931 -144019652 - MLT1A2 LTR MaLR -293 81 1 909 107 27 20 chr2 109236931 109237080 -144019503 + L1MB1 LINE L1 5794 5943 -225 2537 65 8 60 chr2 109237093 109237462 -144019121 - THE1A LTR MaLR -5 350 1 395 159 43 0 chr2 109237465 109237534 -144019049 - L1M3 LINE L1 -611 5560 5489 52 41 0 0 chr2 109237572 109237645 -144018938 + AT_rich Low_complexity Low_complexity 1 73 0 298 196 18 0 chr2 109239847 109239903 -144016680 + MLT1H LTR MaLR 105 161 -388 551 213 178 5 chr2 109239904 109240101 -144016482 + LTR50 LTR ERVL 557 787 -8 1073 160 21 5 chr2 109240417 109240604 -144015979 - L1PB3 LINE L1 -2 6152 5963 2196 147 0 0 chr2 109241215 109241521 -144015062 + AluSx SINE Alu 1 306 -6 253 320 62 22 chr2 109241571 109241749 -144014834 + HAL1b LINE L1 247 431 -917 226 352 52 5 chr2 109242083 109242276 -144014307 + L1 LINE L1 3899 4100 -2046 323 321 81 43 chr2 109242420 109242530 -144014053 + L1 LINE L1 4306 4410 -1736 2229 109 0 3 chr2 109242530 109242823 -144013760 + AluSx SINE Alu 2 293 -19 323 321 81 43 chr2 109242823 109243058 -144013525 + L1 LINE L1 4410 4664 -1482 2810 207 25 44 chr2 109243112 109244049 -144012534 + L1M4 LINE L1 1302 2221 -4816 378 294 11 0 chr2 109244049 109244141 -144012442 + L1MEd LINE L1 561 653 -5466 21 36 0 0 chr2 109244279 109244307 -144012276 + AT_rich Low_complexity Low_complexity 1 28 0 1777 175 3 3 chr2 109245543 109245846 -144010737 + AluJo SINE Alu 1 303 -9 313 242 99 0 chr2 109246088 109246179 -144010404 + HAL1 LINE L1 1437 1536 -971 1636 187 3 10 chr2 109246342 109246642 -144009941 - AluJb SINE Alu -14 298 1 200 184 0 0 chr2 109246992 109247030 -144009553 + (TG)n Simple_repeat Simple_repeat 1 38 0 851 233 55 0 chr2 109247644 109247846 -144008737 - MER58A DNA MER1_type -10 214 2 2141 163 18 23 chr2 109248135 109248527 -144008056 - MLT1B LTR MaLR 0 390 1 1265 256 81 25 chr2 109248768 109249163 -144007420 + MER77 LTR ERV1 206 597 -8 2476 237 98 60 chr2 109249449 109249589 -144006994 + L1M4 LINE L1 4157 4290 -2816 353 43 0 0 chr2 109249589 109249635 -144006948 + MADE1 DNA Mariner 1 46 -34 2476 237 98 60 chr2 109249635 109249723 -144006860 + L1M4 LINE L1 4290 4373 -2733 1348 70 65 5 chr2 109249723 109249763 -144006820 - MER107 DNA MER1_type 0 197 161 195 42 0 0 chr2 109249763 109249787 -144006796 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1348 70 65 5 chr2 109249787 109249932 -144006651 - MER107 DNA MER1_type -36 161 1 2476 237 98 60 chr2 109249932 109250245 -144006338 + L1M4 LINE L1 4373 4673 -2433 189 0 0 0 chr2 109250245 109250266 -144006317 + (TC)n Simple_repeat Simple_repeat 1 21 0 2476 237 98 60 chr2 109250266 109250849 -144005734 + L1M4 LINE L1 4673 5373 -1733 2054 90 0 0 chr2 109250849 109251115 -144005468 + AluY SINE Alu 41 306 -5 429 81 0 0 chr2 109251115 109251177 -144005406 + (TA)n Simple_repeat Simple_repeat 2 63 0 2373 97 0 0 chr2 109251471 109251781 -144004802 - AluSx SINE Alu -2 310 1 5868 130 59 20 chr2 109251973 109253012 -144003571 - Tigger3b DNA MER2_type -26 1205 127 1945 199 61 23 chr2 109253013 109253455 -144003128 - LTR2B LTR ERV1 0 490 32 669 233 0 0 chr2 109253474 109253603 -144002980 - Tigger3b DNA MER2_type -1102 129 1 23 0 0 0 chr2 109253778 109253801 -144002782 + AT_rich Low_complexity Low_complexity 1 23 0 2167 98 0 0 chr2 109253875 109254179 -144002404 + AluSq SINE Alu 9 312 0 2893 109 49 7 chr2 109254211 109254875 -144001708 - MER4E LTR ERV1 -1 765 2 630 266 174 19 chr2 109256661 109257086 -143999497 - L2 LINE L2 -876 2438 1948 295 240 107 9 chr2 109257557 109257685 -143998898 - L1MC/D LINE L1 -351 5815 5677 203 225 0 0 chr2 109257784 109257824 -143998759 - L2 LINE L2 -14 3258 3219 26 0 0 0 chr2 109258141 109258167 -143998416 + AT_rich Low_complexity Low_complexity 1 26 0 323 257 154 7 chr2 109258275 109258411 -143998172 - MER112 DNA MER1_type -104 156 1 21 36 0 0 chr2 109259612 109259640 -143996943 + AT_rich Low_complexity Low_complexity 1 28 0 1397 194 64 42 chr2 109259923 109260283 -143996300 - MLT1E LTR MaLR -1 592 225 247 192 19 0 chr2 109260319 109260371 -143996212 - MLT1E LTR MaLR -489 53 1 208 342 66 13 chr2 109260622 109260698 -143995885 + L2 LINE L2 3188 3267 -5 806 252 57 40 chr2 109260710 109261134 -143995449 - L1MC5 LINE L1 -32 7929 7499 2125 122 0 10 chr2 109261499 109261811 -143994772 - AluSg SINE Alu -1 309 1 2256 101 10 0 chr2 109261815 109262111 -143994472 - AluSx SINE Alu -13 299 1 21 0 0 0 chr2 109262341 109262362 -143994221 + AT_rich Low_complexity Low_complexity 1 21 0 578 71 0 12 chr2 109264022 109264107 -143992476 + (TA)n Simple_repeat Simple_repeat 1 84 0 3554 222 28 53 chr2 109264107 109264841 -143991742 + L1ME1 LINE L1 4408 5159 -1007 695 204 0 8 chr2 109264841 109264973 -143991610 - FLAM_A SINE Alu -2 131 1 3554 222 28 53 chr2 109264973 109266048 -143990535 + L1ME1 LINE L1 5159 6158 -8 10880 184 13 13 chr2 109266375 109268184 -143988399 - L1PB1 LINE L1 0 6151 4313 315 0 0 0 chr2 109268184 109268219 -143988364 + (TG)n Simple_repeat Simple_repeat 2 36 0 10880 184 13 13 chr2 109268219 109269670 -143986913 - L1PB1 LINE L1 -1838 4313 2864 2222 112 0 3 chr2 109269694 109269998 -143986585 - AluSx SINE Alu -7 305 3 181 156 44 22 chr2 109270104 109270149 -143986434 + L2 LINE L2 1371 1416 -1898 286 308 50 19 chr2 109270299 109270458 -143986125 + L2 LINE L2 2226 2389 -925 1402 25 0 0 chr2 109271709 109271869 -143984714 - L1PA3 LINE L1 -496 5659 5500 4074 29 0 8 chr2 109271869 109272353 -143984230 + L1PA3 LINE L1 5673 6155 0 2179 129 0 0 chr2 109273962 109274272 -143982311 - AluSx SINE Alu 0 312 3 1497 164 38 13 chr2 109274623 109274941 -143981642 - L1MB8 LINE L1 -213 5965 5640 4173 240 39 78 chr2 109274942 109276597 -143979986 - L1MB8 LINE L1 -1054 5092 3504 651 172 0 33 chr2 109276777 109276899 -143979684 - FLAM_C SINE Alu -15 118 1 257 254 86 44 chr2 109277905 109278022 -143978561 + MIR SINE MIR 46 166 -64 25 0 0 0 chr2 109280427 109280452 -143976131 + AT_rich Low_complexity Low_complexity 1 25 0 2342 83 0 13 chr2 109282258 109282560 -143974023 - AluSg SINE Alu -11 299 2 198 0 0 0 chr2 109283601 109283623 -143972960 + (A)n Simple_repeat Simple_repeat 1 22 0 1100 231 14 11 chr2 109283883 109284164 -143972419 - AluSx SINE Alu -30 282 1 2554 62 3 0 chr2 109284414 109284720 -143971863 + AluY SINE Alu 2 308 -3 619 213 13 27 chr2 109286307 109286457 -143970126 - MER3 DNA MER1_type -55 154 7 922 167 36 0 chr2 109286710 109286878 -143969705 + FAM SINE Alu 1 174 -1 200 192 19 39 chr2 109286928 109286980 -143969603 + (TATG)n Simple_repeat Simple_repeat 4 54 0 321 265 132 39 chr2 109287097 109287301 -143969282 - L1MC4 LINE L1 -71 7971 7749 233 286 45 90 chr2 109288297 109288430 -143968153 - L2 LINE L2 -214 3058 2932 203 342 214 0 chr2 109288616 109288733 -143967850 + L2 LINE L2 3126 3267 -5 232 282 223 10 chr2 109288884 109288987 -143967596 + MIR SINE MIR 21 145 -117 192 152 0 0 chr2 109289527 109289560 -143967023 + A-rich Low_complexity Low_complexity 1 33 0 692 124 0 0 chr2 109340131 109340228 -143916355 - AluSg/x SINE Alu -29 280 184 237 33 0 0 chr2 109340228 109340258 -143916325 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 2018 90 7 0 chr2 109340258 109340535 -143916048 - AluSc SINE Alu -30 279 1 1989 120 0 0 chr2 109343138 109343404 -143913179 + AluSq SINE Alu 37 302 -11 382 291 74 11 chr2 109343495 109343684 -143912899 + L2 LINE L2 3113 3313 0 200 229 277 0 chr2 109345938 109346021 -143910562 - MIR3 SINE MIR -98 110 5 1863 161 22 54 chr2 109346621 109347031 -143909552 - L1MA7 LINE L1 -10 6281 5885 2124 134 0 0 chr2 109347032 109347352 -143909231 + L1MA7 LINE L1 5544 5863 -428 1198 266 37 29 chr2 109347335 109347718 -143908865 - HAL1 LINE L1 -2114 393 8 * 183 139 0 0 chr2 109350411 109350447 -143906136 + (GTTTG)n Simple_repeat Simple_repeat 4 39 0 22 35 0 0 chr2 109351142 109351171 -143905412 + AT_rich Low_complexity Low_complexity 1 29 0 231 167 0 0 chr2 109352511 109352553 -143904030 + (TATG)n Simple_repeat Simple_repeat 3 44 0 323 239 114 0 chr2 109353013 109353101 -143903482 - MER103 DNA DNA -66 100 3 180 97 0 0 chr2 109353550 109353581 -143903002 + (TG)n Simple_repeat Simple_repeat 2 32 0 326 296 5 58 chr2 109353624 109353813 -143902770 + (TG)n Simple_repeat Simple_repeat 2 180 0 294 125 0 0 chr2 109354227 109354275 -143902308 + (CAT)n Simple_repeat Simple_repeat 2 49 0 228 287 147 37 chr2 109355199 109355335 -143901248 - MIR SINE MIR -38 170 20 24 32 0 0 chr2 109355417 109355448 -143901135 + AT_rich Low_complexity Low_complexity 1 31 0 5647 86 30 19 chr2 109355623 109356479 -143900104 - SVA Other Other -520 866 1 20890 46 3 3 chr2 109356480 109359001 -143897582 - L1P LINE L1 -3624 2522 1 24 32 0 0 chr2 109359042 109359073 -143897510 + AT_rich Low_complexity Low_complexity 1 31 0 1955 152 3 3 chr2 109359073 109359383 -143897200 - AluJb SINE Alu -2 310 1 1549 226 9 16 chr2 109359383 109359825 -143896758 - L1M3 LINE L1 -740 5440 5001 234 241 101 0 chr2 109361188 109361267 -143895316 + L2 LINE L2 3183 3269 -44 2037 181 40 20 chr2 109361513 109361917 -143894666 - MLT2D LTR ERVL -2 412 1 260 303 92 33 chr2 109362809 109362961 -143893622 - MIR SINE MIR -74 188 28 286 320 30 0 chr2 109363577 109363677 -143892906 - L2 LINE L2 -1 3271 3169 326 225 65 95 chr2 109363982 109364151 -143892432 + MER112 DNA MER1_type 2 165 -95 265 320 163 41 chr2 109364201 109364808 -143891775 - L2 LINE L2 -512 2802 2122 816 289 87 37 chr2 109365555 109366181 -143890402 - L2 LINE L2 0 3313 2633 180 307 123 9 chr2 109366460 109366574 -143890009 - MIR SINE MIR -79 183 57 289 301 84 21 chr2 109366603 109366746 -143889837 - L1ME LINE L1 -352 5769 5618 1222 181 34 0 chr2 109367483 109367720 -143888863 + L1MB2 LINE L1 5920 6164 -7 2409 151 63 57 chr2 109368204 109368606 -143887977 - MER74A LTR ERVL 0 558 151 2286 95 3 19 chr2 109368606 109368923 -143887660 + AluSq SINE Alu 1 312 -1 2409 151 63 57 chr2 109368923 109369044 -143887539 - MER74A LTR ERVL -407 151 32 305 346 51 0 chr2 109369160 109369316 -143887267 + MER5B DNA MER1_type 5 168 -10 1709 150 3 60 chr2 109370442 109370756 -143885827 + AluJb SINE Alu 1 296 -16 234 0 0 0 chr2 109371026 109371052 -143885531 + (TTA)n Simple_repeat Simple_repeat 2 27 0 663 110 0 0 chr2 109371054 109371145 -143885438 - AluSg/x SINE Alu -24 288 198 1435 102 23 23 chr2 109371245 109371461 -143885122 - AluSp SINE Alu -97 216 1 1763 203 72 21 chr2 109371874 109372302 -143884281 + MLT1C LTR MaLR 6 455 -12 269 294 75 27 chr2 109372525 109372671 -143883912 - MIR SINE MIR -37 225 73 5775 147 75 22 chr2 109373015 109373886 -143882697 + L1MC1 LINE L1 4847 5671 -662 2147 179 8 6 chr2 109373886 109374250 -143882333 - MLT1A1 LTR MaLR 0 365 1 5775 147 75 22 chr2 109374250 109374416 -143882167 + L1MC1 LINE L1 5671 5827 -506 1841 172 27 9 chr2 109374416 109374754 -143881829 + MER2 DNA MER2_type 1 344 0 5775 147 75 22 chr2 109374754 109375119 -143881464 + L1MC1 LINE L1 5827 6315 -18 465 19 0 0 chr2 109375285 109375339 -143881244 + (TTTA)n Simple_repeat Simple_repeat 3 56 0 749 113 0 0 chr2 109375348 109375454 -143881129 - FLAM_C SINE Alu -36 107 2 248 302 40 32 chr2 109375587 109375713 -143880870 - MER5A DNA MER1_type -56 133 7 2081 125 0 4 chr2 109376345 109376626 -143879957 + AluSx SINE Alu 1 280 -32 355 224 218 0 chr2 109376720 109376867 -143879716 - MIR SINE MIR -69 193 15 2100 120 0 0 chr2 109377171 109377472 -143879111 + AluSx SINE Alu 9 309 -3 594 234 0 14 chr2 109377580 109377725 -143878858 + L1MB8 LINE L1 6035 6177 -1 2278 109 0 0 chr2 109377737 109378040 -143878543 + AluSq SINE Alu 1 303 -10 1738 129 24 50 chr2 109378697 109379085 -143877498 - Charlie3 DNA MER1_type 0 2712 1 195 316 137 0 chr2 109379369 109379486 -143877097 + MIR SINE MIR 51 183 -79 317 244 173 16 chr2 109380223 109380350 -143876233 + MIR SINE MIR 4 150 -112 498 232 46 26 chr2 109380406 109380557 -143876026 - MER5A DNA MER1_type -35 154 1 195 162 0 0 chr2 109381165 109381202 -143875381 + (TA)n Simple_repeat Simple_repeat 2 38 0 578 166 11 11 chr2 109382517 109382693 -143873890 + GA-rich Low_complexity Low_complexity 1 176 0 2663 45 0 0 chr2 109382832 109383143 -143873440 - AluY SINE Alu 0 311 1 245 270 54 0 chr2 109384420 109384494 -143872089 - MIR SINE MIR -88 174 97 236 50 25 0 chr2 109384955 109384995 -143871588 - MER41B LTR ERV1 -87 548 508 1664 162 32 7 chr2 109385009 109385293 -143871290 - AluJo SINE Alu -21 291 1 539 192 0 29 chr2 109385376 109385480 -143871103 + L1MD2 LINE L1 6231 6331 -28 417 196 147 88 chr2 109385556 109385760 -143870823 + L1MA10 LINE L1 6106 6321 -13 280 321 24 0 chr2 109385851 109385935 -143870648 - L2 LINE L2 -26 3287 3202 500 299 24 6 chr2 109388892 109389056 -143867527 + MIR3 SINE MIR 35 201 -7 310 258 108 0 chr2 109389104 109389197 -143867386 - L2 LINE L2 0 3272 3170 22 56 0 0 chr2 109389810 109389846 -143866737 + AT_rich Low_complexity Low_complexity 1 36 0 1646 201 94 0 chr2 109389937 109390265 -143866318 - MLT1A1 LTR MaLR -4 361 3 2062 111 54 0 chr2 109390591 109390870 -143865713 - AluSx SINE Alu -18 294 1 180 0 0 0 chr2 109390877 109390897 -143865686 + (TTA)n Simple_repeat Simple_repeat 2 21 0 260 384 31 0 chr2 109391503 109391662 -143864921 + MIR SINE MIR 81 244 -18 3779 163 73 35 chr2 109391786 109392078 -143864505 - MER21B LTR ERV1 -98 765 486 2476 113 25 0 chr2 109392078 109392433 -143864150 - THE1B LTR MaLR 0 364 1 3779 163 73 35 chr2 109392433 109392877 -143863706 - MER21B LTR ERV1 -377 486 1 451 189 91 30 chr2 109393526 109393618 -143862965 - MLT1J LTR MaLR -369 142 38 1825 138 6 22 chr2 109393618 109393929 -143862654 + AluJo SINE Alu 1 306 -6 451 189 91 30 chr2 109393929 109393968 -143862615 - MLT1J LTR MaLR -473 38 3 277 39 118 0 chr2 109395186 109395237 -143861346 + CT-rich Low_complexity Low_complexity 5 61 0 9985 32 7 109 chr2 109395237 109396791 -143859792 + SVA Other Other 1 1399 0 2290 73 0 7 chr2 109397373 109397675 -143858908 - AluY SINE Alu -11 300 1 2131 99 3 3 chr2 109397751 109398054 -143858529 - AluSx SINE Alu -9 303 1 1722 166 0 13 chr2 109398054 109398356 -143858227 - AluJo SINE Alu -14 298 1 312 303 106 30 chr2 109398472 109398802 -143857781 - L1ME4a LINE L1 -144 5977 5623 22 35 0 0 chr2 109399084 109399113 -143857470 + AT_rich Low_complexity Low_complexity 1 29 0 1003 247 44 34 chr2 109399449 109399833 -143856750 - L1MC5 LINE L1 -62 7899 7512 290 87 22 0 chr2 109400288 109400334 -143856249 + (CA)n Simple_repeat Simple_repeat 2 48 0 2764 80 11 0 chr2 109400438 109400789 -143855794 - THE1A LTR MaLR 0 355 1 12166 91 2 7 chr2 109400790 109401096 -143855487 - THE1A-int LTR MaLR -1 1579 1273 2188 88 0 29 chr2 109401096 109401402 -143855181 - AluY SINE Alu -14 297 1 12166 91 2 7 chr2 109401402 109402681 -143853902 - THE1A-int LTR MaLR -307 1273 2 2699 96 3 0 chr2 109402682 109403036 -143853547 - THE1A LTR MaLR 0 355 1 404 241 207 7 chr2 109403150 109403295 -143853288 - MLT1J LTR MaLR -337 174 1 183 300 92 54 chr2 109403304 109403434 -143853149 - L2 LINE L2 -956 2358 2224 253 298 50 31 chr2 109403562 109403723 -143852860 - L2 LINE L2 -771 2543 2380 527 284 24 0 chr2 109403837 109403964 -143852619 + MIR SINE MIR 23 152 -110 183 303 92 0 chr2 109404056 109404132 -143852451 - L2 LINE L2 -1019 2295 2213 212 234 0 0 chr2 109404375 109404422 -143852161 + L2 LINE L2 3225 3271 -1 1582 224 28 22 chr2 109405045 109405402 -143851181 + MLT1A1 LTR MaLR 7 365 0 250 179 0 104 chr2 109405402 109405469 -143851114 - MIR3 SINE MIR -42 166 107 351 278 138 58 chr2 109405674 109406052 -143850531 - MLT1I LTR MaLR 0 409 2 586 194 11 17 chr2 109406399 109406574 -143850009 + CT-rich Low_complexity Low_complexity 3 176 0 619 288 194 6 chr2 109406738 109407068 -143849515 + MLT1G LTR MaLR 10 401 -189 1012 211 132 18 chr2 109407089 109407416 -143849167 - MLT1A1 LTR MaLR -1 364 1 500 212 38 71 chr2 109407559 109407743 -143848840 - L1MC5 LINE L1 -85 7876 7699 947 215 96 4 chr2 109407807 109408067 -143848516 + MLT1C LTR MaLR 1 284 -183 916 219 6 6 chr2 109408183 109408361 -143848222 + MLT1C LTR MaLR 290 467 0 2201 99 7 0 chr2 109408377 109408680 -143847903 - AluSx SINE Alu -7 305 1 251 298 24 0 chr2 109409695 109409779 -143846804 + MIR3 SINE MIR 93 178 -30 401 219 236 0 chr2 109410963 109411083 -143845500 + MIR SINE MIR 34 181 -61 6802 85 25 3 chr2 109411339 109412297 -143844286 - L1MA2 LINE L1 -2 6302 5324 1309 184 27 12 chr2 109412302 109412558 -143844025 - AluJb SINE Alu -22 290 31 473 232 108 54 chr2 109412688 109412873 -143843710 - L2 LINE L2 -949 2365 2171 1202 171 32 32 chr2 109413080 109413331 -143843252 - MER96B DNA MER1_type? 0 417 167 323 270 128 47 chr2 109413393 109413541 -143843042 - MER5B DNA MER1_type -14 164 5 546 268 225 33 chr2 109414122 109414623 -143841960 - L2 LINE L2 -1 3312 2701 210 265 45 83 chr2 109415352 109415484 -143841099 - L2 LINE L2 -7 3306 3180 2275 91 0 3 chr2 109415652 109415961 -143840622 + AluSc SINE Alu 1 308 -1 220 236 55 0 chr2 109416005 109416060 -143840523 - L2 LINE L2 -4 3268 3211 2654 144 59 2 chr2 109416180 109416639 -143839944 - MER31A LTR ERV1 0 485 1 417 294 104 25 chr2 109418029 109418192 -143838391 - L2 LINE L2 0 3313 3138 477 259 190 71 chr2 109418239 109418675 -143837908 + MLT1H LTR MaLR 49 536 -13 243 284 22 67 chr2 109418699 109418833 -143837750 - L2 LINE L2 -173 3140 3013 518 289 117 6 chr2 109418843 109419023 -143837560 - MIR SINE MIR -7 255 56 1762 222 82 82 chr2 109419035 109419301 -143837282 - MER21B LTR ERV1 -125 738 473 1517 153 6 132 chr2 109419301 109419658 -143836925 - AluJb SINE Alu 0 302 1 1762 222 82 82 chr2 109419658 109420090 -143836493 - MER21B LTR ERV1 -389 474 40 628 284 29 32 chr2 109420116 109420426 -143836157 + L1MEd LINE L1 949 1257 -4862 1025 194 0 6 chr2 109420441 109420606 -143835977 + MER21B LTR ERV1 329 492 -371 588 233 0 53 chr2 109420935 109421085 -143835498 + FLAM_C SINE Alu 2 143 0 271 255 101 67 chr2 109421093 109421301 -143835282 + HAL1 LINE L1 1372 1586 -921 4552 111 9 66 chr2 109421644 109421738 -143834845 + L1PB4 LINE L1 5408 5506 -650 2178 121 0 0 chr2 109421738 109422045 -143834538 + AluSx SINE Alu 1 307 -5 4552 111 9 66 chr2 109422045 109422736 -143833847 + L1PB4 LINE L1 5506 6148 -8 2418 55 3 0 chr2 109422745 109423038 -143833545 + AluY SINE Alu 1 294 -17 1581 176 36 3 chr2 109424243 109424545 -143832038 + AluJo SINE Alu 1 312 0 193 149 419 0 chr2 109424717 109424791 -143831792 + MER5A DNA MER1_type 78 182 -7 1830 172 11 40 chr2 109425399 109425772 -143830811 - MLT1A1 LTR MaLR -1 364 3 2223 99 7 0 chr2 109426200 109426503 -143830080 + AluY SINE Alu 1 305 -6 225 270 22 11 chr2 109426842 109426931 -143829652 - L2 LINE L2 -149 3164 3075 7209 124 17 14 chr2 109426949 109428851 -143827732 + L1MA2 LINE L1 4185 6097 -207 2072 132 82 15 chr2 109428851 109429192 -143827391 + THE1B LTR MaLR 1 364 0 7209 124 17 14 chr2 109429192 109429401 -143827182 + L1MA2 LINE L1 6097 6304 0 2379 258 91 63 chr2 109429416 109430137 -143826446 - L2 LINE L2 -267 3046 2278 1535 173 0 28 chr2 109430137 109430426 -143826157 + AluJo SINE Alu 13 293 -19 2379 258 91 63 chr2 109430426 109430798 -143825785 - L2 LINE L2 -1035 2278 1918 1120 206 87 4 chr2 109430798 109431075 -143825508 + MER97c DNA MER1_type? 4 303 -787 361 311 110 6 chr2 109431104 109431268 -143825315 + MER97b DNA MER1_type? 351 531 -522 947 205 0 43 chr2 109431271 109431457 -143825126 + AluJo SINE Alu 82 260 -52 1558 144 122 88 chr2 109431457 109431867 -143824716 - MSTA LTR MaLR -4 424 1 947 205 0 43 chr2 109431867 109431890 -143824693 + AluJo SINE Alu 260 282 -30 1121 224 138 0 chr2 109431890 109432216 -143824367 + MER97a DNA MER1_type? 520 890 -4 479 262 41 7 chr2 109432221 109432366 -143824217 - L2 LINE L2 -1405 1909 1760 251 226 179 24 chr2 109432388 109432472 -143824111 + AluJo SINE Alu 54 150 -152 1523 179 0 14 chr2 109432476 109432761 -143823822 + AluJo SINE Alu 20 300 -12 397 264 237 40 chr2 109432790 109433191 -143823392 - L2 LINE L2 -1636 1678 1199 372 312 70 21 chr2 109433200 109433386 -143823197 + MIR SINE MIR 47 241 -21 201 236 175 0 chr2 109433702 109433779 -143822804 + MIR SINE MIR 32 124 -109 466 264 47 62 chr2 109433779 109433972 -143822611 + MIR SINE MIR 70 259 -3 3852 172 25 19 chr2 109434001 109434735 -143821848 - L1MB2 LINE L1 -2 6169 5432 1968 131 7 0 chr2 109434735 109435033 -143821550 - AluSx SINE Alu -12 300 1 24103 35 1 0 chr2 109435049 109438698 -143817885 - L1PA3 LINE L1 0 6155 2507 6430 130 6 129 chr2 109438702 109440429 -143816154 - SVA Other Other 0 1386 79 198 103 0 0 chr2 109440449 109440478 -143816105 + (A)n Simple_repeat Simple_repeat 1 29 0 336 179 47 94 chr2 109440534 109440640 -143815943 + L1MC4 LINE L1 6609 6709 -1333 287 146 18 0 chr2 109440663 109440718 -143815865 + (CATA)n Simple_repeat Simple_repeat 3 58 0 2141 100 3 10 chr2 109441915 109442226 -143814357 - AluSq SINE Alu -4 309 1 6201 145 59 30 chr2 109442395 109443591 -143812992 + Tigger3b DNA MER2_type 1 1231 0 1401 225 40 27 chr2 109444693 109445066 -143811517 + L1MD3 LINE L1 7598 7975 -20 315 234 39 0 chr2 109445877 109445954 -143810629 - MIR SINE MIR -181 81 2 264 321 9 38 chr2 109446138 109446244 -143810339 - MIR SINE MIR -141 121 19 434 269 117 51 chr2 109446426 109446682 -143809901 - L3 LINE CR1 -1131 446 174 252 256 8 16 chr2 109446922 109447043 -143809540 + (TA)n Simple_repeat Simple_repeat 2 121 0 1965 166 0 3 chr2 109447194 109447495 -143809088 + AluJb SINE Alu 1 300 -12 1893 141 10 23 chr2 109448040 109448345 -143808238 + AluJo SINE Alu 1 301 -11 210 267 147 0 chr2 109448418 109448493 -143808090 + L3 LINE CR1 1387 1472 -105 437 247 121 16 chr2 109448805 109448987 -143807596 - MIR SINE MIR -13 249 49 311 210 5 91 chr2 109450214 109450449 -143806134 + C-rich Low_complexity Low_complexity 1 214 0 26 0 0 0 chr2 109450540 109450566 -143806017 + GC_rich Low_complexity Low_complexity 1 26 0 218 60 0 120 chr2 109451466 109451516 -143805067 + (A)n Simple_repeat Simple_repeat 1 44 0 26 0 0 0 chr2 109452092 109452118 -143804465 + AT_rich Low_complexity Low_complexity 1 26 0 24 0 0 0 chr2 109452544 109452568 -143804015 + AT_rich Low_complexity Low_complexity 1 24 0 2004 132 20 10 chr2 109452869 109453164 -143803419 - AluSx SINE Alu -14 298 1 276 75 94 19 chr2 109453288 109453341 -143803242 - MIR SINE MIR -24 238 182 300 243 68 39 chr2 109453407 109453510 -143803073 - L2 LINE L2 -9 3304 3199 827 230 16 5 chr2 109453515 109453702 -143802881 + MER5A DNA MER1_type 1 189 0 1912 173 52 0 chr2 109453917 109454264 -143802319 + MLT1A1 LTR MaLR 1 365 0 1997 118 28 7 chr2 109454405 109454692 -143801891 - AluSx SINE Alu -19 293 1 401 227 39 39 chr2 109454817 109454945 -143801638 - L2 LINE L2 0 3272 3145 329 211 0 0 chr2 109455557 109455628 -143800955 + MER5A DNA MER1_type 40 110 -79 198 287 117 11 chr2 109456128 109456222 -143800361 - MIR SINE MIR -50 212 109 194 275 132 33 chr2 109456429 109456520 -143800063 - MIR SINE MIR -65 143 44 331 274 66 19 chr2 109456739 109456845 -143799738 + MIR3 SINE MIR 82 192 -16 1554 189 20 10 chr2 109457066 109457363 -143799220 - AluJo SINE Alu -8 304 5 574 227 131 21 chr2 109457543 109457736 -143798847 + MIR SINE MIR 47 262 0 606 231 16 54 chr2 109458778 109458964 -143797619 - MIR3 SINE MIR -9 199 21 649 216 111 18 chr2 109459173 109459344 -143797239 - MER5A DNA MER1_type -2 187 1 1177 242 193 47 chr2 109460597 109461334 -143795249 - L2 LINE L2 0 3313 2444 368 242 38 53 chr2 109462104 109462236 -143794347 - MIR3 SINE MIR -5 203 74 281 145 36 116 chr2 109462461 109462575 -143794008 - MER5A DNA MER1_type -83 106 4 2121 91 25 3 chr2 109462650 109462936 -143793647 + AluSq SINE Alu 1 292 -21 229 250 19 0 chr2 109464308 109464382 -143792201 - MIR SINE MIR -87 121 45 31 0 0 0 chr2 109464597 109464628 -143791955 + AT_rich Low_complexity Low_complexity 1 31 0 492 338 10 29 chr2 109464798 109465002 -143791581 - MIR SINE MIR -42 220 21 1917 109 46 36 chr2 109465328 109465631 -143790952 - AluSx SINE Alu -6 306 1 396 259 26 95 chr2 109465714 109465903 -143790680 - MER5B DNA MER1_type 0 178 3 205 138 0 0 chr2 109466272 109466301 -143790282 + (TCCC)n Simple_repeat Simple_repeat 4 32 0 2386 85 3 3 chr2 109466435 109466730 -143789853 + AluSp SINE Alu 1 295 -18 23 33 0 0 chr2 109468188 109468218 -143788365 + AT_rich Low_complexity Low_complexity 1 30 0 216 357 0 0 chr2 109468750 109468834 -143787749 + T-rich Low_complexity Low_complexity 5 88 0 276 30 0 0 chr2 109469282 109469315 -143787268 + (TA)n Simple_repeat Simple_repeat 1 33 0 1048 157 12 0 chr2 109469983 109470149 -143786434 - FRAM SINE Alu -9 167 1 259 253 267 32 chr2 109470337 109470558 -143786025 - L2 LINE L2 -18 3295 3023 404 209 13 23 chr2 109470635 109470787 -143785796 + MLT1H LTR MaLR 75 280 -269 466 212 77 88 chr2 109470836 109471006 -143785577 + MLT1H LTR MaLR 424 586 -4 238 281 193 12 chr2 109471006 109471177 -143785406 - L2 LINE L2 -349 2965 2764 6331 163 75 58 chr2 109471488 109472977 -143783606 - L1MC3 LINE L1 -1 7784 6270 2430 77 0 13 chr2 109473185 109473498 -143783085 - AluSc SINE Alu 0 309 1 1681 175 87 45 chr2 109473692 109474070 -143782513 - MSTD LTR MaLR -2 394 1 224 319 110 18 chr2 109474318 109474481 -143782102 + MIR3 SINE MIR 30 207 -1 2084 127 0 10 chr2 109475137 109475444 -143781139 + AluSq SINE Alu 1 304 -9 220 184 41 20 chr2 109475937 109475986 -143780597 + GA-rich Low_complexity Low_complexity 1 50 0 366 355 57 21 chr2 109476016 109476351 -143780232 + L1MEd LINE L1 480 826 -5293 423 0 0 0 chr2 109476525 109476572 -143780011 + (TG)n Simple_repeat Simple_repeat 2 48 0 250 203 0 34 chr2 109476658 109476717 -143779866 - MER58A DNA MER1_type -3 104 48 795 180 0 8 chr2 109476717 109476845 -143779738 + AluJo SINE Alu 1 127 -175 2186 108 0 3 chr2 109476862 109477149 -143779434 + AluSx SINE Alu 1 286 -26 1164 158 0 0 chr2 109477182 109477353 -143779230 + AluJo SINE Alu 136 306 -6 250 229 21 0 chr2 109477353 109477401 -143779182 - MER58A DNA MER1_type -175 49 1 1807 192 36 61 chr2 109477562 109477695 -143778888 - L1ME LINE L1 -4834 1144 1009 1021 181 23 0 chr2 109477695 109477866 -143778717 - FAM SINE Alu 0 175 1 1807 192 36 61 chr2 109477866 109478201 -143778382 - L1ME LINE L1 -4969 1009 688 1286 201 38 38 chr2 109478201 109478544 -143778039 + MER2 DNA MER2_type 2 344 0 1807 192 36 61 chr2 109478544 109478599 -143777984 - L1ME LINE L1 -5290 688 633 311 314 9 9 chr2 109478610 109478715 -143777868 - L1M4 LINE L1 -5674 1181 1077 1013 248 58 48 chr2 109478727 109479470 -143777113 - L1M4 LINE L1 -5636 1223 70 1482 231 124 14 chr2 109479522 109479950 -143776633 - L1ME LINE L1 -5593 477 3 2331 94 14 3 chr2 109480777 109481074 -143775509 + AluSx SINE Alu 1 300 -12 1678 142 97 34 chr2 109481237 109481589 -143774994 + MLT1A2 LTR MaLR 1 374 0 2640 165 22 34 chr2 109481710 109481844 -143774739 + MER74A LTR ERVL 1 135 -423 1854 154 3 16 chr2 109481844 109482149 -143774434 - AluJo SINE Alu -6 306 6 2640 165 22 34 chr2 109482149 109482548 -143774035 + MER74A LTR ERVL 135 528 -30 4309 59 18 0 chr2 109483223 109483767 -143772816 + MER41A LTR ERV1 1 554 0 2137 136 76 0 chr2 109483795 109484162 -143772421 - L1MB3 LINE L1 -1 6182 5788 352 256 11 0 chr2 109484425 109484515 -143772068 + L2 LINE L2 3182 3272 0 1980 165 53 64 chr2 109484791 109485261 -143771322 + MLT2B1 LTR ERVL 1 343 -54 396 0 0 0 chr2 109485261 109485305 -143771278 + (CA)n Simple_repeat Simple_repeat 2 45 0 1980 165 53 64 chr2 109485305 109485360 -143771223 + MLT2B1 LTR ERVL 343 397 0 23 54 0 0 chr2 109486523 109486560 -143770023 + AT_rich Low_complexity Low_complexity 1 37 0 2466 128 8 18 chr2 109486612 109486657 -143769926 + L1MB3 LINE L1 5788 5832 -351 2154 127 3 3 chr2 109486657 109486957 -143769626 + AluSx SINE Alu 1 300 -12 2466 128 8 18 chr2 109486957 109487311 -143769272 + L1MB3 LINE L1 5832 6183 0 2263 108 0 0 chr2 109488000 109488288 -143768295 + AluSx SINE Alu 1 288 -24 180 0 0 0 chr2 109488297 109488317 -143768266 + (CAAGG)n Simple_repeat Simple_repeat 3 22 0 2332 164 44 2 chr2 109488699 109489108 -143767475 + MSTB LTR MaLR 1 426 0 2261 100 0 26 chr2 109490126 109490435 -143766148 + AluSq SINE Alu 1 301 -12 21 0 0 0 chr2 109490955 109490976 -143765607 + AT_rich Low_complexity Low_complexity 1 21 0 2378 61 0 4 chr2 109491719 109491998 -143764585 + AluSc SINE Alu 1 278 -31 260 324 29 22 chr2 109494405 109494541 -143762042 - MIR3 SINE MIR -3 205 69 210 391 138 23 chr2 109494758 109495062 -143761521 - L2 LINE L2 -2 3270 2932 432 284 22 15 chr2 109495382 109495516 -143761067 + MIR SINE MIR 107 241 -21 396 273 8 8 chr2 109498074 109498195 -143758388 + MIR SINE MIR 59 179 -83 1492 209 138 3 chr2 109498247 109498596 -143757987 - MER82 DNA MER2_type -1 652 257 745 164 0 31 chr2 109499117 109499245 -143757338 + FLAM_C SINE Alu 1 124 -9 297 207 0 0 chr2 109500338 109500396 -143756187 + L1MA10 LINE L1 6276 6333 -1 195 129 0 0 chr2 109502244 109502275 -143754308 + (A)n Simple_repeat Simple_repeat 1 31 0 226 336 62 0 chr2 109503660 109503773 -143752810 + MIR SINE MIR 51 170 -92 1701 157 7 25 chr2 109504312 109504592 -143751991 + AluJo SINE Alu 14 288 -24 405 0 0 0 chr2 109504596 109504641 -143751942 + (TG)n Simple_repeat Simple_repeat 2 46 0 283 343 28 0 chr2 109505004 109505131 -143751452 + MIR SINE MIR 20 153 -55 239 227 62 31 chr2 109505570 109505667 -143750916 - MIR3 SINE MIR -1 207 108 1850 168 3 10 chr2 109505790 109506088 -143750495 - AluJo SINE Alu -16 296 1 2468 84 0 25 chr2 109506283 109506603 -143749980 + AluSx SINE Alu 1 312 0 1043 196 27 27 chr2 109508324 109508543 -143748040 + MER20 DNA MER1_type 1 219 0 1817 167 7 10 chr2 109509070 109509375 -143747208 + AluJo SINE Alu 1 304 -8 200 343 29 7 chr2 109511921 109512058 -143744525 - MIR SINE MIR -110 152 13 2073 153 18 20 chr2 109513524 109513916 -143742667 + L1MB3 LINE L1 5793 6183 0 560 315 32 0 chr2 109514018 109514234 -143742349 + MIR SINE MIR 31 253 -9 366 256 0 0 chr2 109515417 109515507 -143741076 - MER103 DNA DNA -34 132 43 565 286 104 39 chr2 109516202 109516586 -143739997 - L1ME LINE L1 -340 5781 5351 1984 137 7 26 chr2 109516586 109516893 -143739690 - AluSx SINE Alu -11 301 1 565 286 104 39 chr2 109516893 109516998 -143739585 - L1ME LINE L1 -770 5351 5254 300 120 0 0 chr2 109517091 109517141 -143739442 + (GA)n Simple_repeat Simple_repeat 1 50 0 387 0 0 0 chr2 109517143 109517186 -143739397 + (TG)n Simple_repeat Simple_repeat 1 43 0 2124 115 0 7 chr2 109517249 109517544 -143739039 + AluSx SINE Alu 1 293 -19 1330 209 72 36 chr2 109517588 109517947 -143738636 + MLT1A2 LTR MaLR 1 372 -2 1827 133 33 3 chr2 109518005 109518306 -143738277 + L1MB3 LINE L1 5697 6006 -177 419 269 81 46 chr2 109518385 109518645 -143737938 + HAL1b LINE L1 345 613 -735 231 262 0 8 chr2 109519084 109519207 -143737376 + GA-rich Low_complexity Low_complexity 1 121 0 351 258 129 42 chr2 109519282 109519499 -143737084 + L1MC4a LINE L1 6091 6326 -1482 295 288 14 48 chr2 109519560 109519706 -143736877 + L1MC5 LINE L1 7607 7747 -214 270 0 0 0 chr2 109520833 109520863 -143735720 + (TG)n Simple_repeat Simple_repeat 2 31 0 2606 56 0 0 chr2 109522056 109522358 -143734225 + AluSc SINE Alu 1 302 -7 187 309 200 23 chr2 109522644 109522819 -143733764 + MIR SINE MIR 52 257 -5 273 98 0 0 chr2 109523268 109523309 -143733274 + (T)n Simple_repeat Simple_repeat 1 41 0 24 0 0 0 chr2 109523448 109523472 -143733111 + AT_rich Low_complexity Low_complexity 1 24 0 198 266 156 28 chr2 109523992 109524101 -143732482 + L2 LINE L2 3145 3267 -5 559 274 33 30 chr2 109524115 109524466 -143732117 + L1MC4 LINE L1 7640 8041 -1 501 340 47 60 chr2 109524658 109524958 -143731625 + L2 LINE L2 2935 3230 -42 2015 160 0 6 chr2 109525522 109525834 -143730749 + AluJb SINE Alu 1 310 -2 783 185 0 0 chr2 109526140 109526270 -143730313 + FLAM_A SINE Alu 2 131 -2 2388 86 7 0 chr2 109526960 109527262 -143729321 - AluSx SINE Alu -8 304 1 338 300 122 52 chr2 109527265 109527467 -143729116 + L1MC4a LINE L1 4746 4933 -1213 1553 191 11 3 chr2 109527467 109527771 -143728812 + AluJb SINE Alu 1 306 0 338 300 122 52 chr2 109527771 109527828 -143728755 + L1MC4a LINE L1 4933 4985 -1161 2136 110 7 7 chr2 109527828 109528127 -143728456 + AluSx SINE Alu 1 299 -13 338 300 122 52 chr2 109528127 109528255 -143728328 + L1MC4a LINE L1 4985 5103 -1043 958 182 24 0 chr2 109528255 109528425 -143728158 - FAM SINE Alu 0 175 2 338 300 122 52 chr2 109528425 109528531 -143728052 + L1MC4a LINE L1 5103 5277 -869 1671 228 108 21 chr2 109528534 109529091 -143727492 + L1MC4a LINE L1 5295 5899 -1909 423 285 162 0 chr2 109529225 109529460 -143727123 + L1MC4a LINE L1 6091 6363 -1445 856 167 0 0 chr2 109529675 109529807 -143726776 + FLAM_A SINE Alu 2 133 0 629 250 180 17 chr2 109529808 109530108 -143726475 + L1MC4 LINE L1 6613 6976 -1000 1166 207 106 96 chr2 109530144 109530897 -143725686 + L1MC5 LINE L1 7166 7926 -35 2011 127 122 86 chr2 109530961 109531026 -143725557 + L1MC1 LINE L1 5814 5875 -458 2334 79 0 0 chr2 109531026 109531305 -143725278 + AluSx SINE Alu 1 279 -33 2011 127 122 86 chr2 109531305 109531734 -143724849 + L1MC1 LINE L1 5875 6328 -5 24 0 0 0 chr2 109532169 109532193 -143724390 + AT_rich Low_complexity Low_complexity 1 24 0 2141 98 35 0 chr2 109532193 109532480 -143724103 - AluSx SINE Alu -15 297 1 2370 91 10 0 chr2 109532580 109532887 -143723696 - AluSp SINE Alu -3 310 1 2208 125 13 54 chr2 109532930 109533041 -143723542 + LTR60 LTR ERV1 1 115 -471 2136 134 0 7 chr2 109533041 109533347 -143723236 + AluSx SINE Alu 1 304 -8 2208 125 13 54 chr2 109533347 109533741 -143722842 + LTR60 LTR ERV1 115 586 0 243 293 12 0 chr2 109533769 109533851 -143722732 + TAR1 Satellite telomeric 197 279 -1832 195 139 0 0 chr2 109535037 109535073 -143721510 + (CA)n Simple_repeat Simple_repeat 1 36 0 501 141 24 0 chr2 109535222 109535307 -143721276 + FLAM_A SINE Alu 47 133 -9 347 303 51 28 chr2 109535924 109536102 -143720481 + L3 LINE CR1 1394 1575 -2 1928 175 40 14 chr2 109536285 109536634 -143719949 + MLT1A1 LTR MaLR 1 358 -7 455 193 123 0 chr2 109536648 109536762 -143719821 + MIR SINE MIR 117 244 -18 213 65 0 0 chr2 109537672 109537703 -143718880 + (A)n Simple_repeat Simple_repeat 1 31 0 1094 182 0 14 chr2 109537932 109538141 -143718442 + AluJo SINE Alu 107 312 0 2193 99 3 33 chr2 109538143 109538447 -143718136 + AluSq SINE Alu 1 295 -18 641 179 16 32 chr2 109538721 109538844 -143717739 + AluJo SINE Alu 14 134 -178 21 82 0 0 chr2 109538844 109538893 -143717690 + AT_rich Low_complexity Low_complexity 1 49 0 2434 91 0 0 chr2 109539356 109539654 -143716929 + AluSq SINE Alu 1 298 -15 300 186 341 72 chr2 109539953 109540356 -143716227 + L1 LINE L1 3504 3797 -2349 277 22 67 0 chr2 109540356 109540401 -143716182 + (TTAAA)n Simple_repeat Simple_repeat 5 52 0 300 186 341 72 chr2 109540401 109540449 -143716134 + L1 LINE L1 3797 3831 -2315 1296 160 129 55 chr2 109540449 109540770 -143715813 + MLT1B LTR MaLR 1 353 -37 2652 49 7 0 chr2 109540770 109541076 -143715507 - AluY SINE Alu -3 308 1 1296 160 129 55 chr2 109541076 109541117 -143715466 + MLT1B LTR MaLR 353 390 0 300 186 341 72 chr2 109541117 109541193 -143715390 + L1 LINE L1 3831 3885 -2261 2394 94 0 3 chr2 109541193 109541500 -143715083 + AluSx SINE Alu 1 306 -6 300 186 341 72 chr2 109541500 109541771 -143714812 + L1 LINE L1 3885 4500 -1646 684 224 86 0 chr2 109541787 109541961 -143714622 + L1ME LINE L1 4615 4803 -1343 * 2995 211 84 24 chr2 109541958 109542871 -143713712 + L1ME2 LINE L1 5203 6164 0 387 0 0 0 chr2 109542947 109542990 -143713593 + (TG)n Simple_repeat Simple_repeat 1 43 0 195 42 0 0 chr2 109542989 109543013 -143713570 + (CG)n Simple_repeat Simple_repeat 2 25 0 * 2247 99 3 26 chr2 109543051 109543355 -143713228 + AluSx SINE Alu 1 297 -15 2275 105 3 0 chr2 109543684 109543980 -143712603 + AluSc SINE Alu 2 298 -11 725 297 54 26 chr2 109543982 109544513 -143712070 + L1ME LINE L1 4955 5500 -664 23 0 0 0 chr2 109544970 109544993 -143711590 + AT_rich Low_complexity Low_complexity 1 23 0 229 360 0 13 chr2 109545586 109545661 -143710922 - AluS SINE Alu -1 301 228 * 266 237 13 0 chr2 109545660 109545736 -143710847 + T-rich Low_complexity Low_complexity 3 79 0 1589 68 5 0 chr2 109545855 109546047 -143710536 - AluY SINE Alu -118 193 1 394 324 0 19 chr2 109549216 109549324 -143707259 + MIR SINE MIR 47 152 -110 2061 104 18 4 chr2 109549367 109549675 -143706908 + AluSx SINE Alu 1 312 0 534 299 8 37 chr2 109550101 109550312 -143706271 - MIR SINE MIR -46 216 10 181 340 86 57 chr2 109550524 109550768 -143705815 + L2 LINE L2 3019 3269 -3 1348 162 8 40 chr2 109551015 109551262 -143705321 + AluSg/x SINE Alu 70 308 -2 2251 103 0 16 chr2 109551314 109551625 -143704958 + AluSx SINE Alu 1 306 -6 2135 101 0 83 chr2 109552128 109552465 -143704118 - AluSx SINE Alu -3 309 1 180 136 68 17 chr2 109552541 109552600 -143703983 + CT-rich Low_complexity Low_complexity 3 64 0 429 242 16 47 chr2 109553260 109553388 -143703195 + L2 LINE L2 3182 3305 -8 1115 137 16 22 chr2 109553726 109553908 -143702675 - AluJo SINE Alu -15 297 117 524 200 16 32 chr2 109554287 109554412 -143702171 + MER58A DNA MER1_type 27 149 0 454 195 35 0 chr2 109554443 109554530 -143702053 + MER58A DNA MER1_type 135 224 0 204 311 33 0 chr2 109555413 109555474 -143701109 + MER91B DNA MER1_type 98 160 -30 1722 155 17 20 chr2 109555483 109555779 -143700804 + AluJb SINE Alu 1 295 -17 1822 138 13 30 chr2 109606386 109606691 -143649892 - AluSx SINE Alu -12 300 1 673 57 0 11 chr2 109606928 109606940 -143649643 + L1P LINE L1 4054 4065 -2081 3352 26 0 0 chr2 109606940 109607326 -143649257 - L1PA2 LINE L1 0 6155 5770 673 57 0 11 chr2 109607326 109607402 -143649181 + L1P LINE L1 4065 4142 -2004 1055 77 8 0 chr2 109607788 109607918 -143648665 - AluSg SINE Alu -179 131 1 225 271 107 21 chr2 109607951 109608091 -143648492 - L2 LINE L2 -798 2516 2365 2570 33 7 13 chr2 109608222 109608527 -143648056 + AluY SINE Alu 1 303 -8 6167 135 20 21 chr2 109608758 109609868 -143646715 - L1MA8 LINE L1 -4 6287 5177 919 222 95 62 chr2 109609891 109610229 -143646354 - L1ME3A LINE L1 -5 6234 5886 289 260 79 84 chr2 109610227 109610276 -143646307 - L1ME3A LINE L1 -590 5643 5595 * 2173 96 11 0 chr2 109610276 109610587 -143645996 - AluSx SINE Alu 0 314 1 289 260 79 84 chr2 109610587 109610763 -143645820 - L1ME3A LINE L1 -638 5595 5418 2023 245 121 47 chr2 109610814 109611124 -143645459 - L1ME3A LINE L1 -913 5302 5016 1614 186 20 24 chr2 109611124 109611420 -143645163 + AluJb SINE Alu 1 295 -17 2023 245 121 47 chr2 109611420 109611705 -143644878 - L1ME3A LINE L1 -1199 5016 4753 180 0 0 0 chr2 109611705 109611725 -143644858 + (CA)n Simple_repeat Simple_repeat 2 21 0 2023 245 121 47 chr2 109611725 109612248 -143644335 - L1ME3A LINE L1 -1462 4753 4101 248 53 26 0 chr2 109612253 109612291 -143644292 + (TG)n Simple_repeat Simple_repeat 2 40 0 5750 64 0 3 chr2 109612415 109613129 -143643454 + L1PA5 LINE L1 5442 6153 -1 927 281 47 17 chr2 109613288 109613694 -143642889 - L1ME3A LINE L1 -3084 3131 2714 344 283 136 49 chr2 109613719 109614557 -143642026 - L1ME3A LINE L1 -4695 1701 791 415 210 28 91 chr2 109615292 109615393 -143641190 + MER94 DNA DNA 1 92 -42 4487 202 91 116 chr2 109615393 109617192 -143639391 - MER52A LTR ERV1 0 1755 1 415 210 28 91 chr2 109617192 109617233 -143639350 + MER94 DNA DNA 92 134 0 2419 60 3 3 chr2 109617406 109617704 -143638879 + AluY SINE Alu 1 298 -13 2272 102 0 19 chr2 109618035 109618349 -143638234 - AluSg SINE Alu -2 308 1 2092 128 0 10 chr2 109618859 109619157 -143637426 - AluSx SINE Alu -17 295 1 2281 101 3 0 chr2 109619566 109619863 -143636720 - AluSp SINE Alu 0 313 16 2087 137 13 0 chr2 109619886 109620192 -143636391 - AluSx SINE Alu -2 310 1 981 206 122 87 chr2 109620192 109620560 -143636023 + MSTD LTR MaLR 16 396 0 212 171 0 0 chr2 109620843 109620884 -143635699 + T-rich Low_complexity Low_complexity 1 41 0 1146 182 116 23 chr2 109622189 109622447 -143634136 + AluJo SINE Alu 1 282 -30 572 295 30 20 chr2 109622734 109622934 -143633649 - MIR SINE MIR 0 262 61 191 296 130 0 chr2 109623539 109623654 -143632929 + MIR SINE MIR 125 254 -8 262 169 14 28 chr2 109624410 109624481 -143632102 + (CATA)n Simple_repeat Simple_repeat 2 71 0 1645 60 0 32 chr2 109624547 109624763 -143631820 + AluY SINE Alu 101 309 -2 228 217 78 62 chr2 109625730 109625827 -143630756 - MLT1I LTR MaLR -33 516 289 300 259 33 75 chr2 109625830 109626042 -143630541 - MLT1H LTR MaLR -221 328 126 1327 147 5 68 chr2 109627723 109628048 -143628535 - Tigger5 DNA MER2_type 0 2323 2033 203 197 33 33 chr2 109628281 109628342 -143628241 + CT-rich Low_complexity Low_complexity 4 64 0 2362 139 15 22 chr2 109629020 109629422 -143627161 + L1PA15 LINE L1 5764 6162 -3 23 0 0 0 chr2 109629513 109629536 -143627047 + AT_rich Low_complexity Low_complexity 1 23 0 251 255 155 37 chr2 109629742 109629903 -143626680 + L1MEc LINE L1 1918 2097 -4299 * 594 251 140 0 chr2 109629893 109630100 -143626483 + L1MA9 LINE L1 6036 6271 -41 22 35 0 0 chr2 109630434 109630463 -143626120 + AT_rich Low_complexity Low_complexity 1 29 0 636 240 172 31 chr2 109631228 109631501 -143625082 - MER57A LTR ERV1 0 403 127 416 237 65 0 chr2 109631519 109631612 -143624971 - LTR54 LTR ERV1 -411 99 1 2366 85 7 7 chr2 109631716 109632021 -143624562 - AluSp SINE Alu -8 305 1 788 257 86 47 chr2 109632190 109632599 -143623984 - LTR16A1 LTR ERVL -13 444 20 3593 149 14 37 chr2 109633491 109633513 -143623070 + MER49 LTR ERV1 1 22 -901 1672 117 4 0 chr2 109633513 109633744 -143622839 + AluSg/x SINE Alu 73 304 -6 3593 149 14 37 chr2 109633744 109634111 -143622472 + MER49 LTR ERV1 22 372 -551 2591 59 3 0 chr2 109634111 109634417 -143622166 + AluY SINE Alu 1 307 -4 3593 149 14 37 chr2 109634417 109634677 -143621906 + MER49 LTR ERV1 372 636 -287 1369 124 89 0 chr2 109634777 109634979 -143621604 + AluSg/x SINE Alu 73 292 -18 1630 138 0 8 chr2 109635212 109635466 -143621117 + L1MB2 LINE L1 5629 5880 -291 237 230 89 4 chr2 109636131 109636208 -143620375 - MIR SINE MIR -76 132 53 1443 192 42 28 chr2 109636639 109636925 -143619658 - AluJo SINE Alu -22 290 1 3959 175 56 45 chr2 109636955 109637685 -143618898 - MER21B LTR ERV1 -49 814 94 219 36 0 0 chr2 109637685 109637713 -143618870 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 2044 148 0 0 chr2 109637713 109637997 -143618586 - AluSx SINE Alu -28 284 1 3959 175 56 45 chr2 109637997 109638069 -143618514 - MER21B LTR ERV1 -768 95 2 478 265 102 29 chr2 109638189 109638434 -143618149 + L1MC4a LINE L1 5668 5930 -1878 21 57 0 0 chr2 109638608 109638643 -143617940 + AT_rich Low_complexity Low_complexity 1 35 0 5453 188 70 52 chr2 109639199 109640246 -143616337 - Charlie1a DNA MER1_type -1337 1424 398 2385 88 0 0 chr2 109640246 109640542 -143616041 + AluSc SINE Alu 1 296 -13 2080 133 10 3 chr2 109640548 109640856 -143615727 + AluSx SINE Alu 2 311 -1 5453 188 70 52 chr2 109640856 109641197 -143615386 - Charlie1a DNA MER1_type -2367 394 3 2030 147 9 6 chr2 109641839 109642166 -143614417 + MER44D DNA MER2_type 8 605 -4 921 240 76 117 chr2 109642301 109642353 -143614230 + MER34 LTR ERV1 11 64 -478 1277 118 5 5 chr2 109642353 109642548 -143614035 - L1PB1 LINE L1 0 6151 5957 921 240 76 117 chr2 109642548 109643050 -143613533 + MER34 LTR ERV1 64 542 0 2587 146 39 20 chr2 109643205 109643663 -143612920 - MLT1C LTR MaLR 0 467 1 2206 140 3 12 chr2 109643771 109644107 -143612476 - MER1B DNA MER1_type -6 333 1 7108 61 7 2 chr2 109646742 109648160 -143608423 + L1PA7 LINE L1 4716 6139 -15 3247 205 19 79 chr2 109648167 109649197 -143607386 + LTR5 LTR ERVK 1 969 0 345 224 0 24 chr2 109650428 109650513 -143606070 + MER112 DNA MER1_type 137 219 -41 343 207 122 0 chr2 109650979 109651061 -143605522 - MER94 DNA DNA -42 92 1 212 329 49 49 chr2 109652353 109652395 -143604188 + MIR SINE MIR 41 82 -180 2457 174 69 17 chr2 109652395 109652873 -143603710 + MLT1D LTR MaLR 3 505 0 212 329 49 49 chr2 109652873 109652973 -143603610 + MIR SINE MIR 81 183 -79 270 295 137 7 chr2 109653060 109653199 -143603384 - MIR SINE MIR -70 192 36 2964 182 104 12 chr2 109653328 109653524 -143603059 + MER39 LTR ERV1 2 179 -528 2179 100 0 3 chr2 109653524 109653814 -143602769 + AluSq SINE Alu 1 289 -24 2964 182 104 12 chr2 109653814 109654264 -143602319 + MER39 LTR ERV1 179 707 0 840 249 140 29 chr2 109654456 109655010 -143601573 - L2 LINE L2 -1 3312 2691 263 315 0 0 chr2 109655905 109655997 -143600586 + (CA)n Simple_repeat Simple_repeat 2 93 0 2235 119 0 3 chr2 109656434 109656745 -143599838 - AluSx SINE Alu -2 310 1 193 277 161 9 chr2 109656825 109656937 -143599646 + MIR SINE MIR 43 171 -91 2306 107 13 0 chr2 109657553 109657861 -143598722 + AluSx SINE Alu 1 312 0 260 143 66 132 chr2 109657918 109658009 -143598574 + MIR SINE MIR 117 201 -61 486 171 23 0 chr2 109658046 109658134 -143598449 - FLAM SINE Alu -16 127 38 242 178 47 108 chr2 109658364 109658493 -143598090 - L1ME LINE L1 -237 5884 5764 2003 102 0 11 chr2 109658834 109659126 -143597457 + AluSx SINE Alu 32 312 0 21 71 0 0 chr2 109659815 109659857 -143596726 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr2 109660437 109660459 -143596124 + AT_rich Low_complexity Low_complexity 1 22 0 537 57 16 186 chr2 109660579 109660703 -143595880 + L1MA4A LINE L1 6194 6296 -7 363 333 0 30 chr2 109662590 109662758 -143593825 + L1ME4a LINE L1 5624 5786 -335 984 171 0 0 chr2 109662783 109662941 -143593642 + FRAM SINE Alu 11 168 -8 1896 98 0 55 chr2 109663043 109663317 -143593266 + AluSq SINE Alu 13 271 -42 257 226 98 15 chr2 109663403 109663536 -143593047 + L1ME4a LINE L1 5974 6117 -4 183 115 0 82 chr2 109663764 109663825 -143592758 + (GAAAA)n Simple_repeat Simple_repeat 4 59 0 1541 197 90 52 chr2 109664673 109665095 -143591488 - MER34C LTR ERV1 0 585 148 3423 178 56 12 chr2 109665140 109665712 -143590871 + MER39 LTR ERV1 1 609 -98 1704 159 10 37 chr2 109665712 109666008 -143590575 - AluJo SINE Alu -19 293 6 3423 178 56 12 chr2 109666008 109666110 -143590473 + MER39 LTR ERV1 609 705 -2 192 250 0 19 chr2 109666438 109666490 -143590093 - L2 LINE L2 -1 3312 3262 313 269 25 42 chr2 109666683 109666802 -143589781 - L2 LINE L2 0 3313 3197 1613 171 6 6 chr2 109667937 109668293 -143588290 - Ricksha DNA DNA -15 2839 2545 * 4609 143 40 37 chr2 109668284 109668366 -143588217 - Ricksha DNA DNA -375 2871 2791 2235 108 0 19 chr2 109668366 109668681 -143587902 + AluSg SINE Alu 2 310 0 4609 143 40 37 chr2 109668681 109669426 -143587157 - Ricksha DNA DNA -455 2791 2042 490 204 10 29 chr2 109669435 109669538 -143587045 - Ricksha DNA DNA -1938 108 8 404 271 45 15 chr2 109670144 109670277 -143586306 + LTR33 LTR ERVL 52 188 -333 2196 157 32 36 chr2 109670362 109670803 -143585780 - L1MB3 LINE L1 -8 6175 5737 256 291 60 8 chr2 109671479 109671596 -143584987 + LTR33A LTR ERVL 389 511 -12 1789 112 97 0 chr2 109671596 109671863 -143584720 - AluSq SINE Alu -20 293 1 2184 105 7 3 chr2 109673350 109673644 -143582939 - AluSq SINE Alu -18 295 1 396 249 53 89 chr2 109674399 109674564 -143582019 + L1ME LINE L1 5255 5409 -712 1924 151 10 0 chr2 109674564 109674862 -143581721 + AluJb SINE Alu 1 301 -11 396 249 53 89 chr2 109674862 109675024 -143581559 + L1ME LINE L1 5409 5575 -546 1124 218 48 82 chr2 109675025 109675402 -143581181 + MLT2D LTR ERVL 1 364 -50 237 143 0 0 chr2 109675489 109675531 -143581052 - LTR66 LTR ERVL -171 439 398 241 302 35 0 chr2 109675551 109675637 -143580946 + L1ME LINE L1 5572 5660 -461 337 74 0 56 chr2 109675716 109675770 -143580813 - MADE1 DNA Mariner 0 80 30 1552 164 0 30 chr2 109675771 109676039 -143580544 + AluJb SINE Alu 41 300 -12 2017 130 0 0 chr2 109676098 109676374 -143580209 + AluSq SINE Alu 1 276 -37 2046 148 3 25 chr2 109676612 109676930 -143579653 - AluJo SINE Alu 0 312 2 1828 87 4 4 chr2 109677443 109677673 -143578910 + AluSx SINE Alu 1 230 -82 833 182 13 13 chr2 109677892 109678046 -143578537 + MER49 LTR ERV1 761 914 -9 2733 87 10 25 chr2 109678050 109678376 -143578207 - L1PA13 LINE L1 -11 6152 5831 2087 135 0 26 chr2 109678376 109678687 -143577896 - AluSx SINE Alu -9 303 1 2733 87 10 25 chr2 109678687 109678752 -143577831 - L1PA13 LINE L1 -332 5831 5767 491 288 7 13 chr2 109679639 109679792 -143576791 + MIR SINE MIR 101 252 -10 189 297 0 31 chr2 109679885 109679949 -143576634 + L3 LINE CR1 1509 1570 -7 181 418 37 30 chr2 109679963 109680097 -143576486 + L2 LINE L2 3125 3259 -13 23 0 0 0 chr2 109680173 109680196 -143576387 + AT_rich Low_complexity Low_complexity 1 23 0 407 279 43 12 chr2 109680237 109680398 -143576185 - MIR SINE MIR -51 211 46 688 185 125 17 chr2 109680970 109681202 -143575381 + Charlie1 DNA MER1_type 2500 2756 -5 260 258 61 0 chr2 109681570 109681636 -143574947 + MIR SINE MIR 51 120 -142 230 254 56 0 chr2 109682476 109682547 -143574036 + L2 LINE L2 3230 3304 -9 452 202 10 10 chr2 109682742 109682846 -143573737 - L1MC/D LINE L1 -669 5967 5864 * 1336 254 8 28 chr2 109682830 109683189 -143573394 - L1MC/D LINE L1 -1767 4773 4422 * 4112 235 42 46 chr2 109683184 109683397 -143573186 - L1MC/D LINE L1 -2465 4075 3863 2392 110 0 0 chr2 109683397 109683705 -143572878 - AluSx SINE Alu -4 308 1 4112 235 42 46 chr2 109683705 109684411 -143572172 - L1MC/D LINE L1 -2677 3863 3156 1821 162 25 4 chr2 109684411 109684716 -143571867 - AluSx SINE Alu 0 311 1 4112 235 42 46 chr2 109684716 109685125 -143571458 - L1MC/D LINE L1 -3384 3156 2747 2208 106 3 3 chr2 109685125 109685447 -143571136 + AluSp SINE Alu 1 322 0 4112 235 42 46 chr2 109685447 109685529 -143571054 - L1MC/D LINE L1 -3793 2747 2666 792 223 46 35 chr2 109685520 109685717 -143570866 - L1MC/D LINE L1 -6192 348 150 * 205 295 141 32 chr2 109686588 109686744 -143569839 - MIR SINE MIR -29 233 61 2255 97 0 7 chr2 109687426 109687725 -143568858 + AluSq SINE Alu 1 297 -16 2001 118 52 0 chr2 109689560 109689878 -143566705 + AluSx SINE Alu 1 332 0 4170 98 44 108 chr2 109690362 109691201 -143565382 + LTR1 LTR ERV1 1 785 0 440 308 62 40 chr2 109691313 109691537 -143565046 + MIR SINE MIR 13 241 -21 2665 243 81 92 chr2 109692019 109692839 -143563744 + HAL1 LINE L1 829 1623 -884 2773 99 5 8 chr2 109692839 109693234 -143563349 + L1PA10 LINE L1 5770 6163 -5 2665 243 81 92 chr2 109693234 109694065 -143562518 + HAL1 LINE L1 1623 2462 -45 211 280 65 11 chr2 109694808 109694901 -143561682 + L2 LINE L2 3148 3245 -27 208 236 55 18 chr2 109695040 109695095 -143561488 + L3 LINE CR1 1500 1556 -21 316 269 39 0 chr2 109695561 109695665 -143560918 - MER91C DNA MER1_type -32 108 1 465 169 8 24 chr2 109695887 109696011 -143560572 + CT-rich Low_complexity Low_complexity 1 122 0 905 78 0 58 chr2 109696012 109696203 -143560380 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 1954 148 0 0 chr2 109696222 109696499 -143560084 - AluSx SINE Alu -35 277 1 738 253 83 32 chr2 109698374 109698627 -143557956 - Charlie8 DNA MER1_type -2141 276 11 327 227 265 0 chr2 109699311 109699443 -143557140 - MER5B DNA MER1_type -6 172 6 682 203 122 0 chr2 109699487 109699635 -143556948 - MER45A DNA AcHobo 0 178 13 1386 194 67 14 chr2 109699925 109700209 -143556374 + AluJb SINE Alu 1 299 -13 393 250 20 0 chr2 109700234 109700334 -143556249 - L1ME3 LINE L1 -148 6014 5913 2186 182 55 11 chr2 109700339 109700772 -143555811 - LTR32 LTR ERVL -5 466 15 249 213 0 0 chr2 109700832 109700879 -143555704 - L1ME3 LINE L1 -1217 4929 4883 * 6538 280 76 37 chr2 109700875 109702216 -143554367 - L1ME3 LINE L1 -318 5913 4626 2139 120 3 10 chr2 109702216 109702517 -143554066 + AluSx SINE Alu 1 299 -13 6538 280 76 37 chr2 109702517 109705859 -143550724 - L1ME3 LINE L1 -1605 4626 1089 2136 146 0 0 chr2 109707075 109707376 -143549207 + AluSx SINE Alu 1 301 -11 259 247 0 67 chr2 109707940 109707994 -143548589 + MER5A DNA MER1_type 22 69 -120 2245 108 10 0 chr2 109707994 109708291 -143548292 + AluSx SINE Alu 1 300 -12 259 247 0 67 chr2 109708291 109708325 -143548258 + MER5A DNA MER1_type 69 104 -85 306 250 0 0 chr2 109708433 109708501 -143548082 - MIR SINE MIR -74 188 121 2255 137 57 8 chr2 109708769 109709141 -143547442 + MLT1B LTR MaLR 1 390 0 227 213 49 0 chr2 109710063 109710124 -143546459 + MIR SINE MIR 82 145 -63 3190 163 99 25 chr2 109710788 109711477 -143545106 + L1MB4 LINE L1 5440 6179 -1 2336 92 3 13 chr2 109712555 109712869 -143543714 + AluY SINE Alu 1 311 0 517 251 76 6 chr2 109713154 109713319 -143543264 + MIR SINE MIR 3 192 -63 386 279 181 18 chr2 109714201 109714427 -143542156 - LTR33 LTR ERVL -5 516 254 1815 135 10 33 chr2 109714448 109714751 -143541832 + AluSx SINE Alu 1 296 -16 198 85 43 21 chr2 109714751 109714798 -143541785 + (TA)n Simple_repeat Simple_repeat 1 48 0 25 51 0 0 chr2 109714814 109714853 -143541730 + AT_rich Low_complexity Low_complexity 1 39 0 194 54 0 54 chr2 109714897 109714934 -143541649 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 260 225 28 14 chr2 109715112 109715183 -143541400 - L1ME LINE L1 -339 5782 5711 243 284 49 0 chr2 109716160 109716262 -143540321 + Charlie8 DNA MER1_type 115 221 -2196 847 280 129 23 chr2 109716658 109716968 -143539615 + L2 LINE L2 1329 1605 -1709 4360 108 11 13 chr2 109716968 109717604 -143538979 - MER41B LTR ERV1 0 635 1 847 280 129 23 chr2 109717604 109717950 -143538633 + L2 LINE L2 1605 2055 -1259 751 239 129 66 chr2 109718185 109718595 -143537988 - MLT1C LTR MaLR -26 441 6 1107 206 17 34 chr2 109719528 109719600 -143536983 - MER119 DNA MER1_type -18 565 493 2461 68 0 0 chr2 109719600 109719895 -143536688 - AluY SINE Alu -16 295 1 1107 206 17 34 chr2 109719895 109720113 -143536470 - MER119 DNA MER1_type -90 493 280 1917 170 28 53 chr2 109720113 109720280 -143536303 + MLT1B LTR MaLR 1 171 -219 2157 116 0 0 chr2 109720280 109720565 -143536018 + AluSx SINE Alu 1 285 -27 186 43 0 0 chr2 109720568 109720591 -143535992 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 1917 170 28 53 chr2 109720591 109720656 -143535927 + MLT1B LTR MaLR 173 238 -152 863 249 132 67 chr2 109720656 109721165 -143535418 - MER34 LTR ERV1 0 542 1 1917 170 28 53 chr2 109721165 109721326 -143535257 + MLT1B LTR MaLR 238 389 -1 2190 126 3 0 chr2 109721339 109721641 -143534942 - AluSx SINE Alu -9 303 1 499 306 64 6 chr2 109721706 109721863 -143534720 - MER119 DNA MER1_type -417 166 1 2939 3 0 0 chr2 109722538 109722848 -143533735 + AluYa5 SINE Alu 1 310 -1 1600 173 180 14 chr2 109722979 109723395 -143533188 - LTR54B LTR ERV1 -13 485 1 236 279 0 0 chr2 109723395 109723463 -143533120 + L1ME4a LINE L1 5977 6044 -77 2029 138 3 13 chr2 109723664 109723969 -143532614 - AluJo SINE Alu -6 306 5 230 250 83 0 chr2 109724578 109724650 -143531933 - Charlie8 DNA MER1_type 0 2417 2340 1499 187 0 73 chr2 109725841 109726141 -143530442 - AluJo SINE Alu -11 301 24 2040 145 38 41 chr2 109726260 109726421 -143530162 + MLT1A1 LTR MaLR 1 161 -204 2459 63 0 7 chr2 109726421 109726721 -143529862 - AluY SINE Alu -13 298 1 2040 145 38 41 chr2 109726721 109726925 -143529658 + MLT1A1 LTR MaLR 161 365 0 246 62 0 0 chr2 109728083 109728115 -143528468 + (TA)n Simple_repeat Simple_repeat 2 33 0 234 259 0 0 chr2 109729175 109729229 -143527354 + (CA)n Simple_repeat Simple_repeat 2 55 0 289 206 29 0 chr2 109729283 109729351 -143527232 + MLT1C LTR MaLR 27 96 -269 933 209 36 51 chr2 109730766 109731115 -143525468 + MLT1C LTR MaLR 68 467 0 2964 122 32 97 chr2 109731337 109731894 -143524689 + LTR26B LTR ERV1 1 521 -10 181 329 14 0 chr2 109732586 109732656 -143523927 - MIR SINE MIR -114 148 78 2042 189 10 5 chr2 109733090 109733481 -143523102 + MLT2C1 LTR ERVL 3 395 -2 1095 265 112 3 chr2 109733998 109734292 -143522291 + MER58B DNA MER1_type 1 326 -15 23 68 0 0 chr2 109735353 109735397 -143521186 + AT_rich Low_complexity Low_complexity 1 44 0 201 121 0 0 chr2 109735804 109735837 -143520746 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 927 257 37 12 chr2 109737113 109737354 -143519229 + MER34 LTR ERV1 13 259 -283 2256 108 0 3 chr2 109737355 109737652 -143518931 + AluSx SINE Alu 1 296 -16 1053 149 58 0 chr2 109737706 109737894 -143518689 + MER34 LTR ERV1 344 542 0 336 216 32 27 chr2 109738096 109738209 -143518374 - MIR SINE MIR -60 148 34 644 282 73 48 chr2 109738392 109738747 -143517836 - LTR33 LTR ERVL -157 364 1 30 27 0 0 chr2 109740770 109740807 -143515776 + AT_rich Low_complexity Low_complexity 1 37 0 2283 87 0 17 chr2 109741868 109742166 -143514417 - AluSq SINE Alu -20 293 1 2276 103 42 17 chr2 109742440 109742981 -143513602 - LTR10E LTR ERV1 -21 612 1 1409 212 4 4 chr2 109743144 109743399 -143513184 - Harlequin LTR ERV1 -2943 3953 3699 325 150 40 35 chr2 109743399 109743500 -143513083 + Alu SINE Alu 245 298 -2 24 0 0 0 chr2 109743500 109743524 -143513059 + AT_rich Low_complexity Low_complexity 1 24 0 412 291 50 6 chr2 109743717 109743899 -143512684 - L1MC4a LINE L1 -1906 5902 5713 188 313 73 0 chr2 109743937 109744033 -143512550 + L2 LINE L2 2594 2696 -618 385 193 82 131 chr2 109744034 109744243 -143512340 - L1M4 LINE L1 -1200 4946 4759 216 67 0 0 chr2 109744243 109744273 -143512310 + (TCCA)n Simple_repeat Simple_repeat 4 33 0 385 193 82 131 chr2 109744273 109744415 -143512168 - L1M4 LINE L1 -1387 4759 4612 715 235 25 84 chr2 109744441 109744764 -143511819 - L1M4 LINE L1 -1526 4620 4317 1364 226 29 100 chr2 109744764 109745178 -143511405 + L1M4 LINE L1 3938 4309 -1837 2356 91 3 3 chr2 109745178 109745485 -143511098 - AluY SINE Alu -4 307 1 1364 226 29 100 chr2 109745485 109745592 -143510991 + L1M4 LINE L1 4309 4422 -1724 473 218 10 20 chr2 109745592 109745693 -143510890 + MLT1A2 LTR MaLR 229 328 -46 915 231 66 53 chr2 109745693 109746238 -143510345 + L1M4 LINE L1 4399 5113 -1033 1931 133 3 35 chr2 109746238 109746554 -143510029 + AluSq SINE Alu 5 310 -3 915 231 66 53 chr2 109746554 109746838 -143509745 + L1M4 LINE L1 5113 5392 -754 350 171 22 18 chr2 109746820 109746932 -143509651 + L1ME LINE L1 5327 5434 -717 * 740 247 0 0 chr2 109746932 109747078 -143509505 - MER45 DNA AcHobo -1432 149 4 2371 110 0 0 chr2 109747555 109747865 -143508718 - AluSg SINE Alu 0 310 1 25 31 0 0 chr2 109748418 109748450 -143508133 + AT_rich Low_complexity Low_complexity 1 32 0 2035 132 0 7 chr2 109748451 109748740 -143507843 - AluSx SINE Alu -25 287 1 392 310 49 0 chr2 109750992 109751134 -143505449 + MER103 DNA DNA 11 159 -7 254 283 100 33 chr2 109751421 109751541 -143505042 + MIR SINE MIR 22 149 -113 183 350 17 0 chr2 109751559 109751619 -143504964 - L2 LINE L2 -16 3297 3237 188 368 21 21 chr2 109752465 109752560 -143504023 - MIR3 SINE MIR -54 154 60 259 197 13 40 chr2 109752608 109752684 -143503899 - LTR33 LTR ERVL -20 501 428 335 241 132 32 chr2 109752761 109752981 -143503602 - LTR33 LTR ERVL -235 286 45 2016 221 82 50 chr2 109753005 109753400 -143503183 + LTR65 LTR ERV1 1 382 -287 2218 119 44 36 chr2 109753400 109753761 -143502822 - THE1B LTR MaLR 0 364 1 2016 221 82 50 chr2 109753761 109753878 -143502705 + LTR65 LTR ERV1 382 494 -175 1986 132 3 7 chr2 109753878 109754166 -143502417 - AluJo SINE Alu -9 303 17 2016 221 82 50 chr2 109754166 109754298 -143502285 + LTR65 LTR ERV1 494 667 -2 2245 200 24 2 chr2 109755626 109756086 -143500497 - L1MB3 LINE L1 -3 6180 5711 757 204 25 60 chr2 109757575 109757736 -143498847 - MER20 DNA MER1_type -3 216 62 2056 141 3 3 chr2 109757736 109758041 -143498542 + AluJb SINE Alu 1 305 -7 757 204 25 60 chr2 109758041 109758080 -143498503 - MER20 DNA MER1_type -157 62 23 781 243 64 18 chr2 109758082 109758300 -143498283 - MIR SINE MIR -11 251 24 353 223 99 50 chr2 109758356 109758477 -143498106 - MIR SINE MIR -118 144 18 267 311 78 0 chr2 109758825 109758928 -143497655 + MIR SINE MIR 34 144 -118 207 0 0 0 chr2 109759107 109759130 -143497453 + (T)n Simple_repeat Simple_repeat 1 23 0 2145 192 65 16 chr2 109760320 109760810 -143495773 + MLT2B1 LTR ERVL 7 520 0 2066 109 25 7 chr2 109761095 109761380 -143495203 - AluSx SINE Alu 0 312 23 372 255 21 0 chr2 109761382 109761476 -143495107 - MER5B DNA MER1_type -74 104 9 * 409 321 89 21 chr2 109761455 109761645 -143494938 + MIR SINE MIR 7 209 -53 325 275 123 14 chr2 109762423 109762561 -143494022 + L2 LINE L2 3161 3313 0 2201 90 7 3 chr2 109762615 109762903 -143493680 + AluSc SINE Alu 7 295 -14 872 200 32 21 chr2 109763759 109763949 -143492634 + MER3 DNA MER1_type 1 192 -17 186 133 0 0 chr2 109764300 109764330 -143492253 + (T)n Simple_repeat Simple_repeat 1 30 0 2135 150 0 0 chr2 109764332 109764638 -143491945 - AluSx SINE Alu 0 312 7 584 278 43 12 chr2 109764749 109764911 -143491672 - MER5B DNA MER1_type -5 173 7 864 293 151 45 chr2 109765073 109766127 -143490456 + L2 LINE L2 2111 3273 -40 2266 169 26 35 chr2 109766218 109766675 -143489908 - L1MB3 LINE L1 0 6183 5731 434 206 29 10 chr2 109767570 109767672 -143488911 + MER5C DNA MER1_type 5 108 -216 303 297 55 23 chr2 109768252 109768380 -143488203 - MIR SINE MIR -3 259 128 1393 190 48 64 chr2 109768451 109768869 -143487714 + MLT1C LTR MaLR 34 349 -25 286 275 63 42 chr2 109768931 109769073 -143487510 + MLT1K LTR MaLR 151 295 -293 246 193 165 28 chr2 109769118 109769227 -143487356 + MLT1K LTR MaLR 452 575 -13 286 254 61 92 chr2 109770168 109770396 -143486187 - MLT1L LTR MaLR -8 607 387 683 250 34 15 chr2 109770773 109770987 -143485596 - MLT1L LTR MaLR -27 561 339 242 161 0 18 chr2 109771030 109771086 -143485497 + GA-rich Low_complexity Low_complexity 2 56 0 340 260 21 0 chr2 109771154 109771250 -143485333 - MER46C DNA MER2_type -8 330 233 234 262 64 58 chr2 109771989 109772161 -143484422 - MIR3 SINE MIR -15 193 21 449 133 33 0 chr2 109772405 109772495 -143484088 - L1MA4A LINE L1 0 6303 6211 2088 75 0 0 chr2 109772526 109772778 -143483805 - AluY SINE Alu 0 311 60 2966 146 4 0 chr2 109772809 109773296 -143483287 - L1PA16 LINE L1 -21 6145 5657 813 146 7 0 chr2 109773295 109773439 -143483144 + L1MA4A LINE L1 6056 6200 -103 * 231 226 0 0 chr2 109774423 109774476 -143482107 + T-rich Low_complexity Low_complexity 1 53 0 628 250 43 16 chr2 109775291 109775475 -143481108 - MER5A DNA MER1_type 0 189 1 1296 218 65 107 chr2 109775605 109776147 -143480436 - LTR40a LTR ERVL 0 519 1 299 111 125 97 chr2 109776205 109776277 -143480306 + MLT1D LTR MaLR 3 76 -429 1568 208 52 50 chr2 109776281 109776575 -143480008 - MLT1C LTR MaLR -2 465 168 1694 178 7 32 chr2 109776575 109776884 -143479699 + AluJo SINE Alu 1 301 -11 1568 208 52 50 chr2 109776884 109777013 -143479570 - MLT1C LTR MaLR -299 168 41 1425 214 47 19 chr2 109777074 109777475 -143479108 + MLT1D LTR MaLR 98 503 -2 201 39 0 0 chr2 109778356 109778382 -143478201 + (CA)n Simple_repeat Simple_repeat 2 27 0 421 210 30 0 chr2 109779493 109779593 -143476990 - MER96B DNA MER1_type? -182 235 133 422 274 118 13 chr2 109779609 109779762 -143476821 + HAL1 LINE L1 101 269 -2238 281 214 83 0 chr2 109779869 109779953 -143476630 + HAL1 LINE L1 433 523 -1984 1384 307 108 74 chr2 109780033 109780553 -143476030 + HAL1 LINE L1 630 1131 -1376 2295 108 13 10 chr2 109780553 109780860 -143475723 + AluSq SINE Alu 1 308 -5 1384 307 108 74 chr2 109780860 109781034 -143475549 + HAL1 LINE L1 1131 1298 -1209 2139 128 3 3 chr2 109781034 109781332 -143475251 + AluJb SINE Alu 1 298 -14 1384 307 108 74 chr2 109781332 109781558 -143475025 + HAL1 LINE L1 1298 1515 -992 8059 7 0 3 chr2 109781558 109782622 -143473961 - L1PA2 LINE L1 -1 6154 5099 1384 307 108 74 chr2 109782622 109783516 -143473067 + HAL1 LINE L1 1515 2507 0 592 235 122 15 chr2 109784599 109784795 -143471788 + LTR33 LTR ERVL 302 518 -3 338 341 81 0 chr2 109784853 109784976 -143471607 + L2 LINE L2 3180 3312 -1 262 233 58 10 chr2 109785273 109785376 -143471207 - MLT1L LTR MaLR -2 613 506 269 252 205 7 chr2 109785429 109785580 -143471003 - MLT1L LTR MaLR -235 380 200 2115 139 7 0 chr2 109785622 109785924 -143470659 - AluSx SINE Alu -8 304 1 1689 161 29 83 chr2 109785972 109786358 -143470225 + MLT1A1 LTR MaLR 1 365 0 209 204 68 0 chr2 109786891 109786935 -143469648 - MIR SINE MIR -124 84 38 450 261 27 11 chr2 109787089 109787342 -143469241 + L1MC4a LINE L1 5591 5905 -1903 562 236 123 10 chr2 109788313 109788634 -143467949 - MER69 DNA AcHobo -62 2464 2083 583 288 11 11 chr2 109788651 109788828 -143467755 - MER69 DNA AcHobo -389 837 661 246 316 13 0 chr2 109788837 109788916 -143467667 - MER69 DNA AcHobo -486 740 661 194 293 211 14 chr2 109791064 109791211 -143465372 + MIR3 SINE MIR 22 197 -11 1110 112 39 0 chr2 109791952 109792131 -143464452 - MSTB LTR MaLR -237 189 4 317 245 273 7 chr2 109792413 109792556 -143464027 - MER5A DNA MER1_type 0 189 9 305 303 13 0 chr2 109792690 109792766 -143463817 + L2 LINE L2 3196 3272 0 219 36 0 0 chr2 109795397 109795425 -143461158 + (T)n Simple_repeat Simple_repeat 1 28 0 24 53 0 0 chr2 109795657 109795695 -143460888 + AT_rich Low_complexity Low_complexity 1 38 0 204 283 0 0 chr2 109795857 109795903 -143460680 + L2 LINE L2 3214 3259 -13 2294 105 3 0 chr2 109796164 109796469 -143460114 - AluSq SINE Alu -7 306 1 2218 161 59 23 chr2 109796983 109797425 -143459158 + L1MA8 LINE L1 5828 6285 -6 2117 112 3 3 chr2 109797540 109797826 -143458757 + AluSx SINE Alu 1 286 -26 234 0 0 0 chr2 109797830 109797856 -143458727 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 35 24 0 0 chr2 109797870 109797912 -143458671 + AT_rich Low_complexity Low_complexity 1 42 0 225 146 0 0 chr2 109800608 109800656 -143455927 + (T)n Simple_repeat Simple_repeat 1 48 0 207 111 0 28 chr2 109800829 109800865 -143455718 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 292 340 33 20 chr2 109800887 109801037 -143455546 + MIR3 SINE MIR 47 198 -10 6067 128 6 16 chr2 109802454 109803386 -143453197 - MER49 LTR ERV1 0 923 1 186 43 0 0 chr2 109803484 109803507 -143453076 + (CATA)n Simple_repeat Simple_repeat 4 26 0 480 274 0 0 chr2 109803621 109803734 -143452849 - MER63B DNA MER1_type 0 434 322 1657 123 31 19 chr2 109803734 109803994 -143452589 + L1MC1 LINE L1 5622 5884 -449 2224 95 10 20 chr2 109804000 109804305 -143452278 + AluSc SINE Alu 1 302 -7 728 154 0 14 chr2 109804314 109804457 -143452126 + GA-rich Low_complexity Low_complexity 4 144 0 2489 158 22 9 chr2 109804457 109804907 -143451676 + L1MC1 LINE L1 5878 6333 0 1037 210 65 34 chr2 109804907 109805198 -143451385 - MER63B DNA MER1_type -111 325 26 1060 220 0 18 chr2 109805223 109805441 -143451142 - AluJo SINE Alu -25 287 74 480 269 0 41 chr2 109806352 109806497 -143450086 - MER5B DNA MER1_type -38 140 2 1933 144 7 0 chr2 109807408 109807699 -143448884 + AluSx SINE Alu 1 293 -19 1777 143 0 67 chr2 109807938 109808253 -143448330 - AluJo SINE Alu -18 294 1 754 309 104 20 chr2 109808270 109808934 -143447649 + L1ME3A LINE L1 5175 5897 -273 21 0 0 0 chr2 109809429 109809450 -143447133 + AT_rich Low_complexity Low_complexity 1 21 0 2209 127 0 3 chr2 109809590 109809898 -143446685 + AluSx SINE Alu 1 307 -5 1824 153 3 17 chr2 109810764 109811059 -143445524 - AluJb SINE Alu 0 312 22 279 0 0 0 chr2 109813181 109813212 -143443371 + (CAA)n Simple_repeat Simple_repeat 2 32 0 186 319 56 0 chr2 109814418 109814490 -143442093 + MIR SINE MIR 150 225 -37 820 293 108 55 chr2 109814565 109814999 -143441584 + LTR16A LTR ERVL 1 450 0 282 282 0 13 chr2 109815194 109815272 -143441311 + HAL1 LINE L1 8 84 -2423 180 0 0 0 chr2 109817485 109817505 -143439078 + (T)n Simple_repeat Simple_repeat 1 20 0 273 269 0 13 chr2 109818191 109818269 -143438314 - MER5B DNA MER1_type 0 178 102 * 774 181 28 0 chr2 109818267 109818411 -143438172 + MER5A DNA MER1_type 38 185 -4 246 221 186 0 chr2 109818414 109818500 -143438083 + MER5B DNA MER1_type 69 170 -8 1632 261 117 27 chr2 109818615 109819135 -143437448 - MER74B LTR ERVL 0 622 56 222 248 144 80 chr2 109819196 109819321 -143437262 + MIR SINE MIR 119 251 -11 2205 119 0 10 chr2 109819420 109819722 -143436861 + AluSx SINE Alu 1 299 -13 2097 138 3 6 chr2 109819726 109820078 -143436505 + AluSx SINE Alu 1 351 0 2178 154 66 88 chr2 109820974 109821487 -143435096 - MLT1D LTR MaLR 0 505 4 186 244 226 35 chr2 109822622 109822737 -143433846 - MIR SINE MIR -12 250 114 183 277 143 45 chr2 109823239 109823351 -143433232 - L3 LINE CR1 -51 1526 1404 2366 179 79 7 chr2 109823465 109823923 -143432660 - MLT1D LTR MaLR 0 505 15 290 111 22 0 chr2 109823911 109823956 -143432627 + THE1B LTR MaLR 281 326 -38 * 328 260 0 0 chr2 109824983 109825060 -143431523 - MSTA LTR MaLR 0 428 352 240 35 0 0 chr2 109825243 109825272 -143431311 + (G)n Simple_repeat Simple_repeat 1 29 0 2834 121 12 2 chr2 109825589 109826019 -143430564 - MER57B LTR ERV1 0 434 1 2919 194 39 32 chr2 109826697 109827346 -143429237 - MER82 DNA MER2_type 0 653 1 358 319 21 0 chr2 109828575 109828719 -143427864 + L1ME4a LINE L1 5690 5836 -285 540 318 60 39 chr2 109828720 109828744 -143427839 + L1ME3A LINE L1 5414 5436 -734 439 155 0 0 chr2 109828744 109828828 -143427755 + L1MA4 LINE L1 6214 6297 -3 540 318 60 39 chr2 109828828 109829319 -143427264 + L1ME3A LINE L1 5436 5940 -230 365 245 158 57 chr2 109831855 109832120 -143424463 + LTR16C LTR ERVL 200 491 0 1499 193 7 27 chr2 109834158 109834491 -143422092 - AluSx SINE Alu 0 312 1 1922 144 4 0 chr2 109834718 109834996 -143421587 + AluSx SINE Alu 1 279 -33 210 37 0 0 chr2 109834997 109835024 -143421559 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 626 298 19 5 chr2 109835279 109835487 -143421096 + L1ME4a LINE L1 5552 5762 -359 240 264 38 0 chr2 109835488 109835594 -143420989 + (TA)n Simple_repeat Simple_repeat 2 111 0 335 260 142 21 chr2 109835594 109835882 -143420701 + L1ME4a LINE L1 5797 6119 -2 360 111 0 0 chr2 109835922 109835976 -143420607 + (CA)n Simple_repeat Simple_repeat 1 54 0 693 304 108 16 chr2 109837023 109837450 -143419133 + L3 LINE CR1 899 1364 -213 1062 118 0 18 chr2 109837644 109837813 -143418770 - L1PA10 LINE L1 0 6168 6003 254 286 83 23 chr2 109837813 109837946 -143418637 - MIR3 SINE MIR -28 180 40 493 206 32 16 chr2 109842601 109842727 -143413856 - MER5A DNA MER1_type -53 136 9 516 253 25 19 chr2 109842753 109842915 -143413668 + MIR SINE MIR 30 192 -70 427 279 84 13 chr2 109843239 109843393 -143413190 + MIR3 SINE MIR 36 200 -8 2070 112 34 3 chr2 109843917 109844211 -143412372 + AluSq SINE Alu 2 304 -9 3290 155 14 0 chr2 109844898 109845459 -143411124 + L1MC1 LINE L1 5764 6332 -1 1945 138 7 24 chr2 109845469 109845765 -143410818 + AluSx SINE Alu 1 291 -21 544 267 47 6 chr2 109845778 109845950 -143410633 - MIR SINE MIR -3 259 81 252 0 0 0 chr2 109845983 109846011 -143410572 + (T)n Simple_repeat Simple_repeat 1 28 0 3770 98 8 19 chr2 109846391 109846924 -143409659 - MER1A DNA MER1_type 0 527 1 1988 156 0 3 chr2 109847293 109847595 -143408988 + AluJb SINE Alu 1 301 -11 1845 125 30 37 chr2 109849232 109849529 -143407054 - AluJo SINE Alu -4 308 14 2134 125 0 24 chr2 109849822 109850119 -143406464 + AluSx SINE Alu 2 291 -21 22 0 0 0 chr2 109850797 109850819 -143405764 + AT_rich Low_complexity Low_complexity 1 22 0 1064 77 26 29 chr2 109851576 109852081 -143404502 + (TTTC)n Simple_repeat Simple_repeat 2 359 0 2201 116 10 13 chr2 109851738 109852392 -143404191 - AluSx SINE Alu -1 814 1 441 329 13 19 chr2 109852392 109852547 -143404036 + MIR3 SINE MIR 42 195 -13 6891 190 18 19 chr2 109852963 109854441 -143402142 + L1MB2 LINE L1 3773 5254 -917 2180 142 35 35 chr2 109854441 109854815 -143401768 - THE1C LTR MaLR -1 374 1 6891 190 18 19 chr2 109854815 109855529 -143401054 + L1MB2 LINE L1 5254 5968 -203 6850 256 88 47 chr2 109856024 109856662 -143399921 - L1ME1 LINE L1 -231 5869 5259 441 0 0 0 chr2 109856662 109856711 -143399872 + (TA)n Simple_repeat Simple_repeat 1 49 0 6850 256 88 47 chr2 109856711 109860080 -143396503 - L1ME1 LINE L1 -841 5259 2030 2269 105 3 0 chr2 109860080 109860375 -143396208 + AluSp SINE Alu 1 296 -17 207 0 0 0 chr2 109860375 109860398 -143396185 + (TA)n Simple_repeat Simple_repeat 1 23 0 6850 256 88 47 chr2 109860398 109861431 -143395152 - L1ME1 LINE L1 -4069 2031 560 711 268 97 86 chr2 109861633 109862136 -143394447 - L1ME1 LINE L1 -5549 521 13 1251 206 50 16 chr2 109862372 109862868 -143393715 - MLT1E3 LTR MaLR 0 624 1 360 219 24 0 chr2 109862869 109862951 -143393632 + L1MC/D LINE L1 5694 5777 -2031 2615 55 0 0 chr2 109863318 109863629 -143392954 - AluY SINE Alu 0 311 1 2350 201 40 28 chr2 109864172 109864658 -143391925 - MER89 LTR ERV1 -9 550 72 297 0 0 0 chr2 109864658 109864691 -143391892 + (TA)n Simple_repeat Simple_repeat 2 34 0 2271 88 10 0 chr2 109864691 109864997 -143391586 - AluY SINE Alu -2 309 1 2350 201 40 28 chr2 109864997 109865052 -143391531 - MER89 LTR ERV1 -486 73 1 288 279 116 39 chr2 109866551 109866680 -143389903 + MER5A DNA MER1_type 45 183 -6 2566 48 0 0 chr2 109867387 109867680 -143388903 - AluY SINE Alu -18 293 1 2427 94 0 0 chr2 109868530 109868828 -143387755 - AluSg SINE Alu -11 299 2 232 280 40 0 chr2 109868968 109869043 -143387540 - MLT1L LTR MaLR -537 78 1 1359 113 29 84 chr2 109869208 109869357 -143387226 + MER30 DNA MER1_type 6 139 -91 2367 97 0 0 chr2 109869357 109869657 -143386926 + AluSc SINE Alu 1 300 -9 1359 113 29 84 chr2 109869657 109869745 -143386838 + MER30 DNA MER1_type 139 230 0 321 68 0 0 chr2 109870510 109870554 -143386029 + (TG)n Simple_repeat Simple_repeat 1 44 0 445 146 118 64 chr2 109872010 109872120 -143384463 + FLAM_A SINE Alu 26 141 -1 722 50 8 34 chr2 109872320 109872439 -143384144 + (TTTC)n Simple_repeat Simple_repeat 3 118 0 1252 171 0 5 chr2 109872439 109872649 -143383934 - AluJo SINE Alu -32 280 72 692 168 0 0 chr2 109872684 109872791 -143383792 - FLAM_C SINE Alu -35 108 2 394 222 151 0 chr2 109873043 109873168 -143383415 - LTR16C LTR ERVL 0 491 348 1600 193 48 31 chr2 109873168 109873521 -143383062 + MLT1A2 LTR MaLR 1 359 -15 378 294 173 22 chr2 109873523 109873836 -143382747 - LTR16C LTR ERVL -128 363 4 233 300 27 0 chr2 109874088 109874198 -143382385 + L2 LINE L2 2947 3059 -213 1009 279 66 13 chr2 109874961 109875338 -143381245 + LTR16C LTR ERVL 85 481 -10 904 249 148 46 chr2 109875836 109876523 -143380060 - L2 LINE L2 -1 3312 2525 297 312 0 88 chr2 109876622 109876792 -143379791 + MIR3 SINE MIR 24 178 -30 738 169 0 32 chr2 109876895 109877049 -143379534 + L1MA4 LINE L1 3355 3503 -2643 1883 144 3 33 chr2 109877054 109877359 -143379224 + AluSx SINE Alu 1 296 -16 1817 143 36 133 chr2 109877902 109878322 -143378261 - MER47B DNA MER2_type -20 398 20 634 277 39 19 chr2 109878375 109878635 -143377948 - MER46C DNA MER2_type -5 333 69 434 234 74 69 chr2 109878828 109879179 -143377404 + LTR31 LTR ERV1 266 489 0 406 271 105 30 chr2 109879208 109879341 -143377242 - MIR SINE MIR -114 148 6 26 0 0 0 chr2 109879579 109879605 -143376978 + AT_rich Low_complexity Low_complexity 1 26 0 2124 141 14 20 chr2 109879832 109880186 -143376397 + L1MA9 LINE L1 5956 6307 -5 6438 149 8 22 chr2 109880223 109880694 -143375889 + L1MA4 LINE L1 4802 5278 -1022 2146 114 0 0 chr2 109880694 109880999 -143375584 + AluSx SINE Alu 1 305 0 6438 149 8 22 chr2 109880999 109882040 -143374543 + L1MA4 LINE L1 5278 6293 -7 464 163 22 0 chr2 109882096 109882188 -143374395 - Charlie2a DNA MER1_type -1921 941 848 3008 51 3 0 chr2 109882473 109882825 -143373758 + L1PA6 LINE L1 5800 6152 -2 2225 118 0 0 chr2 109883355 109883661 -143372922 + AluSx SINE Alu 1 306 -6 2276 97 7 3 chr2 109883700 109884010 -143372573 - AluY SINE Alu 0 311 1 905 203 138 24 chr2 109884013 109884435 -143372148 + Charlie2 DNA MER1_type 2251 2770 -92 234 143 14 29 chr2 109885029 109885099 -143371484 + (TG)n Simple_repeat Simple_repeat 2 70 0 369 239 49 12 chr2 109885114 109885277 -143371306 + (TG)n Simple_repeat Simple_repeat 2 170 0 414 161 27 0 chr2 109885308 109885420 -143371163 + (TG)n Simple_repeat Simple_repeat 2 116 0 854 175 6 0 chr2 109885631 109885808 -143370775 + (TGGA)n Simple_repeat Simple_repeat 1 178 0 318 311 186 27 chr2 109887349 109887384 -143369199 - L1ME4a LINE L1 -98 6023 5995 459 35 0 0 chr2 109887384 109887441 -143369142 + (TTTC)n Simple_repeat Simple_repeat 2 58 0 1790 147 0 8 chr2 109887442 109887707 -143368876 - AluSq SINE Alu -32 281 19 318 311 186 27 chr2 109887707 109887760 -143368823 - L1ME4a LINE L1 -126 5995 5952 1797 166 109 6 chr2 109887760 109888091 -143368492 + MLT1A1 LTR MaLR 1 365 0 318 311 186 27 chr2 109888091 109888369 -143368214 - L1ME4a LINE L1 -169 5952 5595 1143 237 0 25 chr2 109888823 109889068 -143367515 - MER8 DNA MER2_type 0 239 1 2153 116 0 0 chr2 109889083 109889387 -143367196 - AluSq SINE Alu 0 304 1 251 363 71 9 chr2 109890084 109890197 -143366386 + L3b LINE CR1 1441 1560 -23 1795 166 0 14 chr2 109891050 109891346 -143365237 - AluJo SINE Alu -20 292 1 355 241 75 92 chr2 109891602 109891830 -143364753 + MLT1J LTR MaLR 186 409 -102 356 188 188 24 chr2 109891874 109892039 -143364544 + L1MC4a LINE L1 5281 5472 -2336 303 344 131 18 chr2 109892299 109892520 -143364063 + L1MC4a LINE L1 5661 5906 -1902 1174 280 191 17 chr2 109892690 109893560 -143363023 - L2 LINE L2 -5 3308 2285 1989 79 0 8 chr2 109893579 109893833 -143362750 - AluY SINE Alu -15 296 45 224 240 202 55 chr2 109894861 109895044 -143361539 + MIR SINE MIR 47 256 -6 1543 184 4 0 chr2 109896702 109896957 -143359626 + AluJb SINE Alu 1 256 -56 450 0 0 0 chr2 109897006 109897056 -143359527 + (CA)n Simple_repeat Simple_repeat 2 51 0 585 224 30 0 chr2 109897067 109897201 -143359382 - MER5A DNA MER1_type -51 138 1 564 281 30 6 chr2 109897266 109897433 -143359150 + MIR SINE MIR 14 184 -78 2549 157 74 5 chr2 109898110 109898557 -143358026 + L1MB3 LINE L1 5698 6175 -8 317 318 124 35 chr2 109899326 109899394 -143357189 - MIR SINE MIR -10 252 192 2342 89 13 0 chr2 109899394 109899696 -143356887 + AluSx SINE Alu 1 306 -6 317 318 124 35 chr2 109899696 109899828 -143356755 - MIR SINE MIR -70 192 34 206 61 0 30 chr2 109900690 109900723 -143355860 + (TC)n Simple_repeat Simple_repeat 1 32 0 641 275 85 10 chr2 109900865 109901160 -143355423 + L1M4 LINE L1 3410 3726 -2420 727 266 167 9 chr2 109901165 109901709 -143354874 + L1M4 LINE L1 3854 4483 -1663 2907 144 68 2 chr2 109902283 109902798 -143353785 - L1MA4A LINE L1 -5 7000 6452 14503 171 38 28 chr2 109902801 109902839 -143353744 - L1MA4A LINE L1 -743 6105 6069 2334 102 3 3 chr2 109902839 109903152 -143353431 - AluSp SINE Alu 0 313 1 14503 171 38 28 chr2 109903152 109906106 -143350477 - L1MA4A LINE L1 -779 6069 3186 276 30 0 0 chr2 109906106 109906139 -143350444 + (TC)n Simple_repeat Simple_repeat 2 34 0 14503 171 38 28 chr2 109906139 109906712 -143349871 - L1MA4A LINE L1 -3662 3186 2621 330 312 111 31 chr2 109906700 109907178 -143349405 - L1ME LINE L1 -341 5780 5265 * 286 309 10 21 chr2 109907283 109907380 -143349203 - L1MC/D LINE L1 -2133 5675 5580 385 265 153 6 chr2 109907388 109907558 -143349025 - MIR SINE MIR -67 195 1 1761 113 117 0 chr2 109907959 109908215 -143348368 + AluSg SINE Alu 11 296 -14 604 226 0 101 chr2 109908726 109908925 -143347658 + MER104 DNA MER2_type 1 179 -1 285 203 31 0 chr2 109909931 109909995 -143346588 - MER5B DNA MER1_type 0 178 113 292 261 57 10 chr2 109910060 109910172 -143346411 + MER5B DNA MER1_type 65 171 -7 515 296 82 11 chr2 109910451 109910718 -143345865 - LTR33 LTR ERVL -235 286 1 406 374 24 12 chr2 109911484 109911730 -143344853 + L3 LINE CR1 1262 1510 -67 1784 124 130 34 chr2 109911766 109912088 -143344495 + MLT1B LTR MaLR 1 353 -37 284 345 124 0 chr2 109912497 109912772 -143343811 + L3 LINE CR1 1263 1571 -6 598 256 129 50 chr2 109912953 109913394 -143343189 + LTR33 LTR ERVL 24 499 -22 398 135 0 46 chr2 109913577 109913829 -143342754 + AluSx SINE Alu 1 301 -1 225 0 0 0 chr2 109915786 109915811 -143340772 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 354 268 0 27 chr2 109917126 109917238 -143339345 + L2 LINE L2 878 986 -2328 687 227 88 101 chr2 109917253 109917649 -143338934 + L2 LINE L2 2920 3310 -3 1240 70 0 0 chr2 109917886 109918044 -143338539 + L1PB1 LINE L1 5994 6151 0 1768 227 35 62 chr2 109919316 109919835 -143336748 - MLT1D LTR MaLR 0 505 1 457 220 23 23 chr2 109919891 109920023 -143336560 + L1MA10 LINE L1 6201 6332 -2 189 214 0 0 chr2 109920283 109920325 -143336258 + (CA)n Simple_repeat Simple_repeat 2 43 0 2129 132 3 0 chr2 109921138 109921449 -143335134 + AluSx SINE Alu 1 312 0 28 48 0 0 chr2 109921677 109921719 -143334864 + AT_rich Low_complexity Low_complexity 1 42 0 687 97 10 13 chr2 109921997 109922109 -143334474 + L1P5 LINE L1 5677 5786 -365 1408 91 0 0 chr2 109922386 109922562 -143334021 + AluSg/x SINE Alu 132 307 -3 1852 252 27 43 chr2 109922827 109922942 -143333641 + MLT1E LTR MaLR 3 118 -475 1852 129 47 78 chr2 109922942 109923329 -143333254 - THE1C LTR MaLR 0 375 1 1852 252 27 43 chr2 109923329 109923814 -143332769 + MLT1E LTR MaLR 118 593 0 2406 100 0 3 chr2 109924020 109924330 -143332253 - AluSx SINE Alu -1 311 3 2072 252 23 21 chr2 109926167 109926683 -143329900 - LTR40a LTR ERVL -2 517 1 261 206 33 76 chr2 109926809 109926901 -143329682 - MIR3 SINE MIR -36 172 85 977 301 42 13 chr2 109927035 109927457 -143329126 - LTR16C LTR ERVL -3 488 1 279 79 0 0 chr2 109928583 109928621 -143327962 + (TG)n Simple_repeat Simple_repeat 2 39 0 687 269 124 77 chr2 109928649 109928711 -143327872 - LTR16C LTR ERVL 0 491 433 1536 227 48 19 chr2 109928711 109929090 -143327493 + MLT1B LTR MaLR 1 390 0 687 269 124 77 chr2 109929090 109929496 -143327087 - LTR16C LTR ERVL -58 433 1 842 102 94 0 chr2 109929770 109929897 -143326686 - MER85 DNA T2_type 0 139 1 616 192 56 40 chr2 109931150 109931348 -143325235 - L1MC5 LINE L1 -430 7531 7331 1946 104 76 48 chr2 109931422 109931776 -143324807 - THE1B LTR MaLR 0 364 1 1584 230 72 17 chr2 109932056 109932525 -143324058 + MLT1D LTR MaLR 10 504 -1 390 259 43 0 chr2 109932836 109932952 -143323631 + MIR SINE MIR 69 189 -73 2191 104 0 17 chr2 109933180 109933468 -143323115 + AluSx SINE Alu 11 293 -19 2244 105 0 16 chr2 109933900 109934204 -143322379 - AluSx SINE Alu -10 302 4 195 299 42 42 chr2 109935782 109935949 -143320634 + L2 LINE L2 2332 2498 -816 313 239 88 26 chr2 109936324 109936437 -143320146 - LTR67 LTR ERVL 0 557 438 259 266 258 8 chr2 109937117 109937245 -143319338 - MIR SINE MIR -19 243 84 1192 232 123 28 chr2 109937748 109938170 -143318413 + MLT1C LTR MaLR 6 467 0 24 85 0 0 chr2 109940768 109940827 -143315756 + GC_rich Low_complexity Low_complexity 1 59 0 303 28 0 0 chr2 109940888 109940924 -143315659 + (CCG)n Simple_repeat Simple_repeat 3 38 0 35 98 0 0 chr2 109940942 109941054 -143315529 + GC_rich Low_complexity Low_complexity 1 112 0 21 57 0 0 chr2 109941224 109941259 -143315324 + GC_rich Low_complexity Low_complexity 1 35 0 1652 154 0 100 chr2 109944407 109944738 -143311845 - AluJo SINE Alu -14 298 1 213 39 0 0 chr2 109945073 109945099 -143311484 + (CAA)n Simple_repeat Simple_repeat 2 27 0 579 212 116 0 chr2 109945904 109946050 -143310533 + FAM SINE Alu 1 163 -12 282 29 0 0 chr2 109946054 109946089 -143310494 + (CA)n Simple_repeat Simple_repeat 2 36 0 1113 165 74 110 chr2 109946097 109946460 -143310123 - MLT1B LTR MaLR -33 357 8 721 262 65 18 chr2 109947903 109948182 -143308401 - MER33 DNA MER1_type -22 302 11 675 244 37 0 chr2 109948575 109948739 -143307844 - L1PB4 LINE L1 -9 6147 5978 590 63 221 11 chr2 109948746 109948841 -143307742 - L1PB4 LINE L1 -284 5872 5758 350 239 90 8 chr2 109948955 109949089 -143307494 - MIR SINE MIR -41 221 77 2270 98 3 3 chr2 109952832 109953127 -143303456 - AluSp SINE Alu -18 295 1 342 371 33 13 chr2 109953582 109953733 -143302850 - L2 LINE L2 -17 3255 3102 2155 107 3 0 chr2 109954421 109954730 -143301853 - AluSg SINE Alu 0 310 1 2826 171 98 37 chr2 109955512 109956208 -143300375 - L1MC3 LINE L1 0 7785 7048 281 308 108 33 chr2 109956342 109956462 -143300121 + MER5A DNA MER1_type 61 189 0 1764 121 8 8 chr2 109957629 109957893 -143298690 + AluJb SINE Alu 12 275 -37 183 262 82 33 chr2 109958199 109958260 -143298323 + MIR3 SINE MIR 122 185 -23 895 256 121 37 chr2 109958575 109958935 -143297648 + Charlie4a DNA MER1_type 37 436 -1525 2067 108 0 13 chr2 109958935 109959240 -143297343 + AluSx SINE Alu 1 301 -11 895 256 121 37 chr2 109959240 109959285 -143297298 + Charlie4a DNA MER1_type 436 476 -32 24 0 0 0 chr2 109959535 109959559 -143297024 + AT_rich Low_complexity Low_complexity 1 24 0 563 257 138 0 chr2 109959976 109960128 -143296455 - MIR SINE MIR 0 262 90 393 288 73 41 chr2 109960971 109961190 -143295393 - L1ME LINE L1 -387 5734 5509 384 118 0 0 chr2 109961809 109961877 -143294706 + (TG)n Simple_repeat Simple_repeat 2 69 0 366 235 102 31 chr2 109961905 109962003 -143294580 + MLT1E1 LTR MaLR 534 638 -16 1556 194 10 7 chr2 109962341 109962645 -143293938 - AluJo SINE Alu -7 305 1 762 245 99 10 chr2 109963503 109963695 -143292888 + MER58A DNA MER1_type 2 210 -14 197 294 0 0 chr2 109963715 109963766 -143292817 + MIR SINE MIR 25 75 -133 517 262 159 59 chr2 109964041 109964331 -143292252 - MER33 DNA MER1_type 0 324 6 1058 265 30 8 chr2 109964345 109964609 -143291974 - MER21B LTR ERV1 -124 739 470 1177 102 75 21 chr2 109964625 109964811 -143291772 - MER30 DNA MER1_type -34 196 1 537 190 18 86 chr2 109964968 109965131 -143291452 - MER21B LTR ERV1 -614 249 98 397 282 23 35 chr2 109965101 109965256 -143291327 - MER21B LTR ERV1 -399 206 11 * 255 227 206 0 chr2 109965940 109966037 -143290546 + MIR SINE MIR 28 144 -118 195 42 0 0 chr2 109966145 109966169 -143290414 + (A)n Simple_repeat Simple_repeat 1 24 0 2442 58 0 0 chr2 109966931 109967242 -143289341 - AluY SINE Alu 0 311 1 1986 115 7 0 chr2 109967778 109968065 -143288518 + AluSq SINE Alu 6 294 -19 1597 154 7 24 chr2 109969385 109969678 -143286905 - AluJo SINE Alu -14 298 11 349 248 46 18 chr2 109970175 109970284 -143286299 - L2 LINE L2 -2 3311 3200 2197 108 0 0 chr2 109970501 109970798 -143285785 - AluSx SINE Alu -15 297 1 465 188 158 10 chr2 109971403 109971537 -143285046 + FLAM_C SINE Alu 3 151 0 192 211 105 53 chr2 109972326 109972402 -143284181 + MIR3 SINE MIR 120 199 -9 268 219 118 146 chr2 109973400 109973839 -143282744 - LTR33A LTR ERVL -25 498 72 1063 163 0 16 chr2 109975197 109975381 -143281202 - FRAM SINE Alu 0 176 1 2177 116 0 0 chr2 109975514 109975817 -143280766 + AluSx SINE Alu 1 303 -9 351 0 0 0 chr2 109976815 109976854 -143279729 + (CA)n Simple_repeat Simple_repeat 2 40 0 264 296 25 0 chr2 109977001 109977082 -143279501 + MER94 DNA DNA 4 86 -48 1909 168 46 3 chr2 109977106 109977451 -143279132 + MLT1A1 LTR MaLR 1 360 -5 245 341 56 45 chr2 109977696 109977963 -143278620 + L2 LINE L2 2829 3098 -174 453 257 142 26 chr2 109978007 109978233 -143278350 + MIR SINE MIR 2 253 -9 181 195 24 24 chr2 109978320 109978361 -143278222 + L2 LINE L2 3268 3308 -5 877 165 0 0 chr2 109980600 109980758 -143275825 - AluJb SINE Alu -19 293 136 2277 77 0 0 chr2 109981456 109981753 -143274830 - AluY SINE Alu 0 311 15 203 316 71 41 chr2 109982592 109982690 -143273893 - L2 LINE L2 0 3272 3172 197 233 0 100 chr2 109982754 109982814 -143273769 - MIR SINE MIR -2 260 207 1346 215 93 6 chr2 109983783 109984127 -143272456 + MLT1A2 LTR MaLR 1 374 0 2124 118 0 3 chr2 109985673 109985978 -143270605 - AluSx SINE Alu -8 304 1 640 208 46 35 chr2 109986196 109986369 -143270214 - MER5A DNA MER1_type -2 187 13 305 288 67 17 chr2 109987593 109987721 -143268862 + MIR3 SINE MIR 69 201 -7 247 299 158 30 chr2 109988567 109988731 -143267852 + MIR3 SINE MIR 14 198 -10 345 197 111 26 chr2 109988815 109988932 -143267651 - L1MC5 LINE L1 -105 7856 7730 396 216 122 65 chr2 109988942 109989187 -143267396 - L1MC5 LINE L1 -300 7661 7403 309 283 202 19 chr2 109989191 109989449 -143267134 - L1MC5 LINE L1 -595 7366 7062 484 278 73 17 chr2 109989682 109989916 -143266667 - MER41B LTR ERV1 -205 430 184 288 220 134 124 chr2 109990027 109990445 -143266138 - L1MC5 LINE L1 -929 7032 6611 2038 118 3 13 chr2 109990535 109990841 -143265742 - AluSx SINE Alu -9 303 1 24 53 0 0 chr2 109990927 109990965 -143265618 + AT_rich Low_complexity Low_complexity 1 38 0 901 94 0 0 chr2 109991177 109991333 -143265250 - AluSg/x SINE Alu 0 321 166 323 318 26 85 chr2 109991404 109991490 -143265093 - L1MC4a LINE L1 -1738 6070 5999 1220 154 69 12 chr2 109991490 109991736 -143264847 - L1MC1 LINE L1 0 6333 6074 323 318 26 85 chr2 109991736 109991838 -143264745 - L1MC4a LINE L1 -1809 5999 5893 545 211 211 27 chr2 109992071 109992256 -143264327 + MER20 DNA MER1_type 1 219 0 275 219 62 0 chr2 109995325 109995389 -143261194 - L1MD3 LINE L1 -83 7912 7845 254 308 78 62 chr2 109995524 109996073 -143260510 - L1MC4a LINE L1 -813 5333 4776 236 302 52 35 chr2 109997405 109997521 -143259062 + L3 LINE CR1 99 216 -1361 492 344 133 3 chr2 109998434 109998771 -143257812 + L3 LINE CR1 501 881 -696 2508 129 46 10 chr2 109998854 109999271 -143257312 - MSTB1 LTR MaLR 0 432 1 285 276 172 0 chr2 109999364 109999480 -143257103 + L2 LINE L2 3136 3271 -1 233 286 43 0 chr2 109999563 109999633 -143256950 + L3 LINE CR1 1227 1299 -278 200 269 223 15 chr2 109999958 110000088 -143256495 - MIR SINE MIR -58 204 48 207 231 253 11 chr2 110000249 110000340 -143256243 - MER5A DNA MER1_type -1 188 76 274 304 12 93 chr2 110001648 110001809 -143254774 - L2 LINE L2 -227 3045 2898 27 62 0 37 chr2 110001937 110002018 -143254565 + AT_rich Low_complexity Low_complexity 1 78 0 1584 174 35 0 chr2 110002023 110002305 -143254278 - L1MA9 LINE L1 -239 6073 5782 1662 188 31 22 chr2 110002308 110002664 -143253919 - MER46B DNA MER2_type -1 235 2 218 171 0 0 chr2 110002664 110002699 -143253884 + (TG)n Simple_repeat Simple_repeat 2 36 0 2400 62 0 3 chr2 110002718 110003026 -143253557 - AluY SINE Alu -4 307 1 254 186 0 0 chr2 110003034 110003082 -143253501 - L1MA9 LINE L1 -394 5762 5720 841 135 0 28 chr2 110004196 110004374 -143252209 + (TCCC)n Simple_repeat Simple_repeat 4 176 0 262 103 0 0 chr2 110004374 110004413 -143252170 + (TC)n Simple_repeat Simple_repeat 2 40 0 1975 124 15 0 chr2 110004413 110004686 -143251897 - AluSc SINE Alu -32 277 1 390 148 16 0 chr2 110004413 110004474 -143252109 - AluSc SINE Alu 0 316 216 334 276 144 21 chr2 110005164 110005407 -143251176 + L1MC5 LINE L1 7500 7772 -189 1623 173 68 44 chr2 110005797 110006162 -143250421 - MLT1B LTR MaLR -16 374 1 2216 88 39 3 chr2 110007382 110007667 -143248916 + AluSc SINE Alu 1 295 -14 1961 174 64 27 chr2 110008133 110008571 -143248012 + LTR32 LTR ERVL 15 468 -3 977 162 16 5 chr2 110012863 110013048 -143243535 + AluJo SINE Alu 122 308 -4 1196 129 0 0 chr2 110013745 110013908 -143242675 + AluSg/x SINE Alu 133 295 -15 7363 32 5 1 chr2 110014285 110015151 -143241432 + L1PA5 LINE L1 5278 6146 -8 21 0 0 0 chr2 110016041 110016062 -143240521 + AT_rich Low_complexity Low_complexity 1 21 0 230 212 0 45 chr2 110018446 110018512 -143238071 - MIR SINE MIR -108 154 92 369 0 0 0 chr2 110019946 110019987 -143236596 + (TG)n Simple_repeat Simple_repeat 2 42 0 1988 125 44 38 chr2 110022846 110023213 -143233370 - THE1C LTR MaLR 0 375 7 204 179 0 0 chr2 110023608 110023647 -143232936 + (TATATG)n Simple_repeat Simple_repeat 2 40 0 1528 210 71 52 chr2 110023647 110023801 -143232782 + L1M4 LINE L1 2264 2414 -3732 2572 71 0 0 chr2 110023801 110024112 -143232471 - AluY SINE Alu 0 311 1 1528 210 71 52 chr2 110024112 110024475 -143232108 + L1M4 LINE L1 2414 2791 -3355 969 235 38 24 chr2 110024506 110024927 -143231656 + L1MD2 LINE L1 5882 6359 0 191 307 45 23 chr2 110025446 110025534 -143231049 + MIR SINE MIR 25 114 -94 1708 164 108 9 chr2 110026118 110026533 -143230050 - L1MC3 LINE L1 -16 7979 7286 236 238 24 36 chr2 110026577 110026661 -143229922 - MLT1F1 LTR MaLR -450 117 35 3821 116 58 17 chr2 110026795 110027027 -143229556 - L1MA5 LINE L1 -23 6277 6046 1335 190 108 71 chr2 110027027 110027484 -143229099 - L1PA7 LINE L1 -136 6018 5579 414 0 0 0 chr2 110027484 110027530 -143229053 + (TG)n Simple_repeat Simple_repeat 2 47 0 1335 190 108 71 chr2 110027530 110027955 -143228628 - L1PA7 LINE L1 -575 5579 5090 * 1480 152 30 11 chr2 110027952 110028222 -143228361 + L1 LINE L1 4501 4775 -1371 11193 190 63 31 chr2 110028267 110029663 -143226920 - L1 LINE L1 -1055 6153 4804 284 100 0 20 chr2 110029663 110029713 -143226870 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 11193 190 63 31 chr2 110029713 110029895 -143226688 - L1 LINE L1 -2404 4804 4629 2006 142 19 10 chr2 110029895 110030204 -143226379 - AluSx SINE Alu 0 312 1 11193 190 63 31 chr2 110030204 110031465 -143225118 - L1 LINE L1 -2579 4629 3410 1703 175 0 46 chr2 110031465 110031791 -143224792 - AluJo SINE Alu -1 311 1 11193 190 63 31 chr2 110031791 110032177 -143224406 - L1 LINE L1 -3798 3410 3038 423 98 0 0 chr2 110032177 110032238 -143224345 + (TA)n Simple_repeat Simple_repeat 1 61 0 11193 190 63 31 chr2 110032238 110034049 -143222534 - L1 LINE L1 -4170 3038 2 717 303 98 28 chr2 110034119 110034772 -143221811 - L1ME3A LINE L1 -208 5962 5264 21 36 0 0 chr2 110035109 110035137 -143221446 + AT_rich Low_complexity Low_complexity 1 28 0 27 0 0 0 chr2 110035331 110035358 -143221225 + AT_rich Low_complexity Low_complexity 1 27 0 248 290 123 43 chr2 110035604 110035904 -143220679 - L2 LINE L2 -14 3299 2976 462 286 213 45 chr2 110036019 110037142 -143219441 - L2 LINE L2 -508 2806 1495 3774 174 98 19 chr2 110037240 110037564 -143219019 - MER21B LTR ERV1 -52 811 514 3204 135 127 31 chr2 110037564 110038202 -143218381 + LTR34 LTR ERV1 1 699 0 3774 174 98 19 chr2 110038202 110038628 -143217955 - MER21B LTR ERV1 -349 514 1 340 295 217 0 chr2 110038637 110038854 -143217729 - L2 LINE L2 -1930 1384 1121 2182 103 13 7 chr2 110038899 110039199 -143217384 - AluSp SINE Alu -11 302 1 21 36 0 0 chr2 110039284 110039312 -143217271 + AT_rich Low_complexity Low_complexity 1 28 0 1378 134 166 47 chr2 110039864 110040184 -143216399 - MER46B DNA MER2_type -3 233 1 3874 147 79 84 chr2 110040311 110041231 -143215352 + L1MC3 LINE L1 6778 7693 -92 1745 120 17 62 chr2 110041255 110041547 -143215036 + AluSg SINE Alu 1 279 -31 435 148 0 0 chr2 110041561 110041649 -143214934 + (TA)n Simple_repeat Simple_repeat 2 89 0 2050 135 10 3 chr2 110042211 110042507 -143214076 - AluSx SINE Alu -14 298 1 3822 165 30 1 chr2 110043443 110044116 -143212467 + L1MB3 LINE L1 5447 6138 -45 228 290 190 30 chr2 110044943 110045143 -143211440 - MIR SINE MIR 0 262 31 1449 142 31 46 chr2 110045915 110046176 -143210407 + AluJo SINE Alu 1 257 -55 2145 69 24 10 chr2 110048079 110048370 -143208213 - AluSc SINE Alu -14 295 1 302 320 23 23 chr2 110049205 110049333 -143207250 - MER5B DNA MER1_type -29 149 22 25 0 0 0 chr2 110049798 110049823 -143206760 + AT_rich Low_complexity Low_complexity 1 25 0 1169 176 10 0 chr2 110050228 110050433 -143206150 - L1MC1 LINE L1 -208 6125 5919 1898 190 24 54 chr2 110050433 110050897 -143205686 - MER31B LTR ERV1 -2 464 15 1705 132 0 23 chr2 110050903 110051169 -143205414 - L1MC1 LINE L1 -412 5921 5662 856 220 8 51 chr2 110051171 110051426 -143205157 - L1MD3 LINE L1 -23 7972 7729 2531 73 0 0 chr2 110052646 110052947 -143203636 - AluY SINE Alu -10 301 1 375 299 92 37 chr2 110054156 110054373 -143202210 - L3 LINE CR1 -87 1490 1262 204 88 15 73 chr2 110054816 110054884 -143201699 + (TTTTTG)n Simple_repeat Simple_repeat 1 64 0 1249 178 48 0 chr2 110055090 110055298 -143201285 - AluJb SINE Alu -30 282 65 300 333 139 17 chr2 110056527 110056764 -143199819 + L1ME3A LINE L1 5888 6153 -17 1600 173 10 32 chr2 110056816 110057129 -143199454 + AluJo SINE Alu 1 306 -6 2251 110 0 0 chr2 110058319 110058628 -143197955 - AluSx SINE Alu -3 309 1 297 0 0 0 chr2 110058717 110058750 -143197833 + (TCCC)n Simple_repeat Simple_repeat 2 34 0 428 270 161 6 chr2 110059433 110059607 -143196976 + L1MC4 LINE L1 7705 7905 -137 599 268 29 57 chr2 110060546 110060755 -143195828 + MIR SINE MIR 5 207 -55 189 273 125 23 chr2 110061164 110061252 -143195331 - L2 LINE L2 -780 2534 2438 414 0 0 0 chr2 110061642 110061688 -143194895 + (CA)n Simple_repeat Simple_repeat 2 47 0 545 297 63 11 chr2 110062026 110062248 -143194335 - MIR SINE MIR -18 244 11 1996 120 3 0 chr2 110062716 110063027 -143193556 - AluSp SINE Alu 0 312 1 345 229 95 29 chr2 110063041 110063146 -143193437 - L1ME4a LINE L1 -40 6081 5970 2042 113 23 46 chr2 110063232 110063577 -143193006 - MER1B DNA MER1_type 0 337 1 226 282 81 48 chr2 110066178 110066302 -143190281 - MIR SINE MIR -70 192 65 34 42 0 0 chr2 110066607 110066655 -143189928 + AT_rich Low_complexity Low_complexity 1 48 0 1926 129 16 3 chr2 110067286 110067589 -143188994 + AluSx SINE Alu 1 307 -5 2208 89 10 7 chr2 110068304 110068608 -143187975 - AluSx SINE Alu -7 305 1 219 269 10 67 chr2 110071986 110072090 -143184493 + MIR SINE MIR 40 137 -71 1868 158 57 21 chr2 110072301 110072637 -143183946 + MLT1A1 LTR MaLR 18 365 0 180 283 0 0 chr2 110072643 110072689 -143183894 + MIR3 SINE MIR 161 206 -2 340 200 104 44 chr2 110074630 110074765 -143181818 + MIR SINE MIR 65 207 -55 2202 143 15 59 chr2 110075073 110075479 -143181104 + MLT1B LTR MaLR 1 388 -2 209 303 0 79 chr2 110075479 110075555 -143181028 - MIR SINE MIR -114 148 79 231 375 19 19 chr2 110075674 110075778 -143180805 + L2 LINE L2 3152 3255 -17 369 231 54 68 chr2 110076996 110077143 -143179440 + MER112 DNA MER1_type 105 249 -11 244 295 0 0 chr2 110077408 110077469 -143179114 - L3 LINE CR1 -15 1562 1502 1537 142 26 53 chr2 110077594 110077897 -143178686 - AluJo SINE Alu -7 295 1 706 191 60 55 chr2 110082336 110082519 -143174064 - MER5A DNA MER1_type -1 188 5 448 272 95 18 chr2 110083183 110083352 -143173231 + MER5A DNA MER1_type 4 185 -4 1251 220 112 1 chr2 110085373 110085721 -143170862 + MLT1F1 LTR MaLR 1 395 -147 740 128 38 190 chr2 110086248 110086385 -143170198 - MER5A DNA MER1_type -5 184 88 1686 188 0 6 chr2 110086385 110086699 -143169884 - AluJb SINE Alu 0 312 1 740 128 38 190 chr2 110086699 110086772 -143169811 - MER5A DNA MER1_type -101 88 6 228 305 9 9 chr2 110087922 110088027 -143168556 + (CA)n Simple_repeat Simple_repeat 1 105 0 2106 101 23 7 chr2 110088352 110088660 -143167923 - AluSq SINE Alu 0 313 1 944 124 112 6 chr2 110088852 110089021 -143167562 + AluSp SINE Alu 120 306 -7 2087 88 3 32 chr2 110089367 110089675 -143166908 + AluSq SINE Alu 1 299 -14 261 83 0 0 chr2 110090798 110090834 -143165749 + (CA)n Simple_repeat Simple_repeat 2 37 0 21 0 0 0 chr2 110090834 110090855 -143165728 + AT_rich Low_complexity Low_complexity 1 21 0 437 297 168 5 chr2 110091490 110091675 -143164908 - MIR SINE MIR -8 254 40 214 316 40 0 chr2 110093023 110093099 -143163484 + MIR SINE MIR 67 145 -117 20002 157 18 9 chr2 110093909 110097830 -143158753 - L1PA13 LINE L1 0 6814 2848 252 77 0 0 chr2 110097830 110097869 -143158714 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 20002 157 18 9 chr2 110097869 110098497 -143158086 - L1PA13 LINE L1 -3966 2848 2227 4681 188 52 5 chr2 110098496 110099321 -143157262 - L1PA13 LINE L1 -5923 864 1 * 2043 124 68 25 chr2 110099491 110099760 -143156823 + MER1B DNA MER1_type 2 289 -2421 306 0 0 0 chr2 110099760 110099794 -143156789 + (CA)n Simple_repeat Simple_repeat 1 34 0 2043 124 68 25 chr2 110099794 110099846 -143156737 + MER1B DNA MER1_type 289 337 0 2234 103 0 0 chr2 110100810 110101112 -143155471 + AluSx SINE Alu 1 302 -10 808 160 93 0 chr2 110101576 110101726 -143154857 + AluSp SINE Alu 137 300 -13 557 252 137 74 chr2 110101868 110102138 -143154445 + L2 LINE L2 3027 3313 0 281 331 43 7 chr2 110102159 110102298 -143154285 - HAL1b LINE L1 -766 582 439 236 89 107 0 chr2 110103044 110103100 -143153483 - MER116 DNA Mariner -12 68 7 216 195 24 0 chr2 110103144 110103185 -143153398 + L2 LINE L2 3271 3312 -1 4135 150 12 26 chr2 110103593 110104333 -143152250 - L1MB3 LINE L1 -2 6181 5452 23 33 0 0 chr2 110104670 110104700 -143151883 + AT_rich Low_complexity Low_complexity 1 30 0 340 313 39 8 chr2 110104895 110105023 -143151560 - L2 LINE L2 -20 3293 3162 1399 85 18 58 chr2 110105074 110105297 -143151286 + AluSx SINE Alu 1 214 -98 1838 138 3 0 chr2 110105402 110105684 -143150899 - AluJb SINE Alu -19 293 11 228 308 169 31 chr2 110105967 110106227 -143150356 - L2 LINE L2 -960 2354 2059 332 266 65 14 chr2 110106231 110106370 -143150213 - L2 LINE L2 -1357 1957 1812 180 345 241 15 chr2 110108291 110108552 -143148031 - L2 LINE L2 -2266 1048 729 2735 176 62 6 chr2 110108662 110109150 -143147433 + MLT2B2 LTR ERVL 1 515 0 315 308 11 11 chr2 110109164 110109255 -143147328 - MIR3 SINE MIR -11 197 107 1040 256 163 50 chr2 110110516 110111039 -143145544 + MLT1G1 LTR MaLR 2 555 0 365 316 51 84 chr2 110111107 110111522 -143145061 + L2 LINE L2 2866 3266 -6 3149 104 22 11 chr2 110112624 110112857 -143143726 - MER4C LTR ERV1 0 465 236 2122 133 0 0 chr2 110112857 110113166 -143143417 + AluSx SINE Alu 1 309 -3 3149 104 22 11 chr2 110113166 110113392 -143143191 - MER4C LTR ERV1 -229 236 1 1147 199 45 7 chr2 110117035 110117326 -143139257 + MER33 DNA MER1_type 23 324 0 303 226 104 66 chr2 110117562 110117668 -143138915 + HAL1 LINE L1 1176 1285 -1222 1813 152 10 3 chr2 110117923 110118232 -143138351 - AluJo SINE Alu -1 311 1 279 216 94 109 chr2 110118264 110118445 -143138138 - L1ME3 LINE L1 -23 6147 5965 3295 126 17 10 chr2 110118461 110118859 -143137724 + L1PA16 LINE L1 5195 5589 -577 2019 134 46 22 chr2 110118859 110119225 -143137358 + THE1C LTR MaLR 1 375 0 3295 126 17 10 chr2 110119225 110119590 -143136993 + L1PA16 LINE L1 5589 6157 -9 253 280 54 0 chr2 110119647 110119740 -143136843 - L1ME3 LINE L1 -210 5960 5863 231 133 0 0 chr2 110119765 110119810 -143136773 + (TG)n Simple_repeat Simple_repeat 2 46 0 330 132 0 0 chr2 110119959 110120012 -143136571 + (A)n Simple_repeat Simple_repeat 1 53 0 515 246 40 0 chr2 110120146 110120272 -143136311 - MER5A DNA MER1_type -2 187 57 2303 105 0 0 chr2 110120464 110120777 -143135806 + AluSq SINE Alu 1 313 0 227 288 0 0 chr2 110121028 110121087 -143135496 - L1M4 LINE L1 -1870 4276 4218 294 266 125 8 chr2 110121099 110121227 -143135356 - LTR33A LTR ERVL -194 329 187 407 275 286 9 chr2 110121304 110121744 -143134839 - L2 LINE L2 -1110 2204 1643 2619 143 2 32 chr2 110121778 110121902 -143134681 - Tigger2a DNA MER2_type -2276 432 306 3718 182 22 20 chr2 110121902 110122617 -143133966 - LTR62 LTR ERVK -2 717 1 2619 143 2 32 chr2 110122617 110122934 -143133649 - Tigger2a DNA MER2_type -2402 306 4 1751 164 14 0 chr2 110123346 110123639 -143132944 - AluJo SINE Alu -11 301 5 225 351 13 0 chr2 110124406 110124483 -143132100 + LTR67 LTR ERVL 433 510 -47 1845 154 0 3 chr2 110126054 110126359 -143130224 - AluJo SINE Alu -8 304 1 441 0 0 0 chr2 110126841 110126890 -143129693 + (TG)n Simple_repeat Simple_repeat 2 50 0 324 281 52 0 chr2 110127343 110127439 -143129144 - MER103 DNA DNA -48 118 18 2121 125 0 0 chr2 110127744 110128048 -143128535 + AluSx SINE Alu 1 304 -8 662 189 114 4 chr2 110128081 110128154 -143128429 - Charlie5 DNA MER1_type 0 2624 2560 1968 141 3 0 chr2 110128154 110128458 -143128125 + AluSg SINE Alu 1 305 -5 662 189 114 4 chr2 110128458 110128612 -143127971 - Charlie5 DNA MER1_type -64 2560 2372 199 257 40 54 chr2 110128658 110128732 -143127851 + MER5B DNA MER1_type 38 110 -68 2287 72 0 3 chr2 110129124 110129417 -143127166 - AluY SINE Alu -19 292 1 259 325 9 35 chr2 110129962 110130076 -143126507 - L2 LINE L2 -18 3254 3144 3116 163 35 50 chr2 110130683 110131304 -143125279 - LTR9 LTR ERV1 0 612 1 269 195 16 16 chr2 110132565 110132693 -143123890 + (CA)n Simple_repeat Simple_repeat 1 128 0 433 260 23 6 chr2 110132716 110132893 -143123690 + (CA)n Simple_repeat Simple_repeat 1 180 0 503 249 29 0 chr2 110132934 110133107 -143123476 + (CA)n Simple_repeat Simple_repeat 2 179 0 477 244 23 9 chr2 110133132 110133671 -143122912 + (CA)n Simple_repeat Simple_repeat 1 546 0 487 268 12 6 chr2 110133682 110133846 -143122737 + (CA)n Simple_repeat Simple_repeat 1 165 0 222 91 0 0 chr2 110133867 110133900 -143122683 + (CA)n Simple_repeat Simple_repeat 1 33 0 388 265 43 5 chr2 110134478 110134606 -143121977 + MIR SINE MIR 19 144 -64 235 245 0 0 chr2 110134603 110134652 -143121931 - L2 LINE L2 -11 3302 3254 * 2411 141 64 7 chr2 110134824 110135229 -143121354 + MSTA LTR MaLR 1 428 0 302 238 111 24 chr2 110135312 110135438 -143121145 + MLT1J1 LTR MaLR 291 427 -19 2560 147 31 2 chr2 110135447 110135861 -143120722 + MSTB LTR MaLR 1 426 0 615 255 43 15 chr2 110136404 110136694 -143119889 + L1MC5 LINE L1 7230 7415 -393 1257 252 68 25 chr2 110136714 110136894 -143119689 - MLT1A2 LTR MaLR -6 368 197 2239 87 0 26 chr2 110136894 110137203 -143119380 - AluY SINE Alu -10 301 1 1257 252 68 25 chr2 110137203 110137375 -143119208 - MLT1A2 LTR MaLR -177 197 1 358 309 16 32 chr2 110137602 110137725 -143118858 - L2 LINE L2 -2 3311 3191 689 195 16 0 chr2 110137823 110137946 -143118637 - Tigger3b DNA MER2_type 0 1241 1117 * 5952 105 41 11 chr2 110137941 110138852 -143117731 - Tigger3b DNA MER2_type -293 938 1 463 179 39 0 chr2 110139385 110139463 -143117120 - Charlie3 DNA MER1_type -4 2706 2626 * 707 146 0 0 chr2 110139461 110139564 -143117019 - Charlie3 DNA MER1_type -2464 246 144 228 147 0 0 chr2 110139569 110139603 -143116980 - Charlie3 DNA MER1_type -2676 34 1 1893 167 27 30 chr2 110140150 110140516 -143116067 - MLT1A1 LTR MaLR 0 365 1 308 273 56 62 chr2 110140668 110140829 -143115754 + MLT1H LTR MaLR 23 182 -367 282 212 106 44 chr2 110141527 110141640 -143114943 - L2 LINE L2 -1 3312 3193 2002 131 0 0 chr2 110141873 110142164 -143114419 + AluSx SINE Alu 1 291 -21 482 123 0 203 chr2 110142180 110142318 -143114265 + L1MB3 LINE L1 5677 5786 -385 222 191 0 0 chr2 110142323 110142370 -143114213 + (TA)n Simple_repeat Simple_repeat 2 48 0 240 130 43 0 chr2 110142373 110142419 -143114164 - L1M2 LINE L1 -498 5793 5746 202 150 25 0 chr2 110142429 110142469 -143114114 + (TA)n Simple_repeat Simple_repeat 1 41 0 1291 149 4 43 chr2 110142470 110142725 -143113858 + L1MB3 LINE L1 5776 6020 -163 842 153 25 0 chr2 110142886 110143049 -143113534 + L1MB3 LINE L1 6017 6183 0 208 330 58 10 chr2 110143102 110143205 -143113378 + MIR3 SINE MIR 82 189 -19 231 170 0 0 chr2 110143983 110144030 -143112553 + (TA)n Simple_repeat Simple_repeat 1 47 0 222 276 0 0 chr2 110144146 110144204 -143112379 + (TG)n Simple_repeat Simple_repeat 1 58 0 904 280 120 20 chr2 110144309 110144709 -143111874 - LTR16A LTR ERVL -8 442 3 633 145 26 15 chr2 110144724 110144922 -143111661 + GA-rich Low_complexity Low_complexity 1 200 0 239 329 49 0 chr2 110144968 110145050 -143111533 + MIR SINE MIR 104 189 -73 686 211 20 93 chr2 110145168 110145289 -143111294 - MER5A DNA MER1_type 0 189 87 2003 119 0 0 chr2 110145289 110145575 -143111008 - AluY SINE Alu -12 299 14 686 211 20 93 chr2 110145575 110145657 -143110926 - MER5A DNA MER1_type -102 87 1 876 222 67 76 chr2 110145700 110146132 -143110451 + MLT2B1 LTR ERVL 1 480 -40 377 263 12 19 chr2 110146132 110146292 -143110291 + (TA)n Simple_repeat Simple_repeat 1 159 0 231 209 48 19 chr2 110146304 110146409 -143110174 + (TA)n Simple_repeat Simple_repeat 2 109 0 371 96 0 68 chr2 110146409 110146482 -143110101 + MLT2B1 LTR ERVL 448 515 -5 789 239 17 0 chr2 110146563 110146739 -143109844 + AluJb SINE Alu 134 312 0 282 116 0 0 chr2 110146739 110146782 -143109801 + (GGAA)n Simple_repeat Simple_repeat 1 43 0 1060 123 6 6 chr2 110146782 110146961 -143109622 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 447 19 0 0 chr2 110146961 110147013 -143109570 + (GGAA)n Simple_repeat Simple_repeat 1 52 0 2208 94 0 3 chr2 110147055 110147352 -143109231 + AluSq SINE Alu 1 296 -17 273 250 130 20 chr2 110148537 110148637 -143107946 + MLT1J2 LTR MaLR 320 434 -16 182 178 44 0 chr2 110149335 110149380 -143107203 + GA-rich Low_complexity Low_complexity 2 48 0 1564 173 85 15 chr2 110149933 110150274 -143106309 + MLT1A1 LTR MaLR 1 365 0 761 270 68 14 chr2 110150563 110150856 -143105727 - LTR16C LTR ERVL 0 491 183 1163 217 131 36 chr2 110152667 110152712 -143103871 - LTR37B LTR ERV1 -3 465 426 1038 222 111 66 chr2 110152712 110153091 -143103492 + MSTD LTR MaLR 1 396 0 1163 217 131 36 chr2 110153091 110153464 -143103119 - LTR37B LTR ERV1 -42 426 7 242 268 31 71 chr2 110155519 110155646 -143100937 + MLT1J LTR MaLR 353 474 -37 824 196 0 0 chr2 110155694 110155837 -143100746 - FRAM SINE Alu 0 176 34 374 312 166 27 chr2 110156641 110157950 -143098633 + L2 LINE L2 1817 3312 -1 2046 131 44 0 chr2 110157968 110158144 -143098439 - AluJo SINE Alu -2 310 114 195 42 0 0 chr2 110158144 110158168 -143098415 + (TTA)n Simple_repeat Simple_repeat 2 25 0 2046 131 44 0 chr2 110158168 110158288 -143098295 - AluJo SINE Alu -198 114 1 300 293 101 25 chr2 110158310 110158508 -143098075 - MIR SINE MIR -14 248 36 697 259 48 41 chr2 110159075 110159345 -143097238 - L1ME3A LINE L1 -57 6113 5842 258 253 0 81 chr2 110160687 110160774 -143095809 + MER5A DNA MER1_type 30 109 -80 1921 122 167 32 chr2 110160881 110161258 -143095325 - MSTA LTR MaLR 0 428 1 327 274 116 48 chr2 110161258 110161583 -143095000 - L1ME4a LINE L1 -135 5986 5636 389 227 73 93 chr2 110161662 110161812 -143094771 + L1MD2 LINE L1 6096 6242 -117 340 257 0 30 chr2 110161801 110161902 -143094681 - L1ME3A LINE L1 -296 5874 5777 * 465 214 19 0 chr2 110161902 110162005 -143094578 + L1MD2 LINE L1 6242 6346 -13 2383 88 0 0 chr2 110162121 110162445 -143094138 + AluY SINE Alu 1 311 0 207 0 0 0 chr2 110162777 110162800 -143093783 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 291 214 0 0 chr2 110163276 110163346 -143093237 + GA-rich Low_complexity Low_complexity 1 70 0 273 237 13 13 chr2 110164073 110164149 -143092434 - MER5B DNA MER1_type -1 177 102 679 197 213 5 chr2 110164165 110164353 -143092230 - ORSL DNA AcHobo 0 275 49 409 165 0 24 chr2 110164374 110164459 -143092124 - MER5B DNA MER1_type -95 83 1 459 0 0 0 chr2 110165197 110165248 -143091335 + (TG)n Simple_repeat Simple_repeat 2 52 0 2231 103 6 59 chr2 110165248 110165589 -143090994 - MER48 LTR ERV1 -64 323 1 5318 84 32 105 chr2 110165592 110166470 -143090113 - HERVH48 LTR ERV1 -7 6647 5834 270 275 43 0 chr2 110168341 110168410 -143088173 - MIR SINE MIR -81 181 110 697 270 52 16 chr2 110169840 110170088 -143086495 + MER46C DNA MER2_type 82 338 0 326 294 7 22 chr2 110170808 110170944 -143085639 + L1MC/D LINE L1 5687 5820 -1988 926 280 117 56 chr2 110171002 110171678 -143084905 + L2 LINE L2 445 1161 -2153 927 284 86 24 chr2 110171692 110172316 -143084267 + L2 LINE L2 2631 3298 -15 207 0 0 0 chr2 110172787 110172810 -143083773 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1783 142 35 3 chr2 110172813 110173095 -143083488 - AluSx SINE Alu -21 291 1 2283 101 0 7 chr2 110173186 110173483 -143083100 + AluSc SINE Alu 1 295 -14 964 217 187 52 chr2 110173914 110174278 -143082305 + MLT1F LTR MaLR 128 540 -2 354 272 56 24 chr2 110174281 110174406 -143082177 + MLT1F-int LTR MaLR 2 130 -1241 685 283 74 27 chr2 110174407 110174743 -143081840 + MLT1F-int LTR MaLR 249 600 -771 507 333 0 0 chr2 110174991 110175153 -143081430 + MLT1F-int LTR MaLR 700 861 -510 375 208 96 119 chr2 110175349 110175620 -143080963 + MLT1F-int LTR MaLR 1107 1667 -68 231 273 76 0 chr2 110175722 110175788 -143080795 + MLT1F LTR MaLR 69 139 -403 869 116 0 0 chr2 110175791 110175920 -143080663 - AluSx SINE Alu 0 312 184 2029 172 93 41 chr2 110175920 110176380 -143080203 - LTR2B LTR ERV1 0 490 7 39742 67 8 3 chr2 110176381 110181355 -143075228 - Harlequin LTR ERV1 0 6896 1898 9639 78 67 29 chr2 110181339 110182714 -143073869 - Harlequin LTR ERV1 -5469 1427 1 * 1636 171 144 40 chr2 110182714 110182943 -143073640 - LTR2B LTR ERV1 0 490 286 186 43 0 0 chr2 110182943 110182966 -143073617 + (CAGAA)n Simple_repeat Simple_repeat 1 23 0 1636 171 144 40 chr2 110182966 110183180 -143073403 - LTR2B LTR ERV1 -204 286 1 1044 149 0 0 chr2 110183180 110183328 -143073255 - AluSx SINE Alu -130 182 35 494 268 251 53 chr2 110183328 110183627 -143072956 + MLT1F LTR MaLR 124 481 -61 5657 77 13 4 chr2 110183632 110184383 -143072200 + MER4E LTR ERV1 1 758 -8 5241 118 18 4 chr2 110184532 110185292 -143071291 - MER4E LTR ERV1 -8 771 1 424 275 23 88 chr2 110186173 110186435 -143070148 + MER21B LTR ERV1 8 252 -611 3849 101 16 51 chr2 110186456 110187069 -143069514 + LTR14B LTR ERVK 17 608 0 9114 89 2 0 chr2 110187069 110188248 -143068335 + HERVK14 LTR ERVK 1 1181 -4764 5853 91 20 11 chr2 110188234 110189018 -143067565 + HERVK14 LTR ERVK 1649 2439 -3506 * 3247 301 32 29 chr2 110189012 110190989 -143065594 + HERVK14C LTR ERVK 3528 7377 -25 * 3908 112 11 49 chr2 110190992 110191624 -143064959 + LTR14B LTR ERVK 1 608 0 873 276 93 57 chr2 110191626 110192068 -143064515 + MER21B LTR ERV1 271 728 -135 1898 153 17 10 chr2 110192509 110192803 -143063780 + AluSx SINE Alu 1 296 -16 2522 186 30 70 chr2 110194867 110195505 -143061078 + LTR9 LTR ERV1 1 612 0 2040 139 0 0 chr2 110196762 110197079 -143059504 - AluSx SINE Alu 0 319 3 432 211 48 10 chr2 110197082 110197186 -143059397 - L1MB8 LINE L1 -68 6608 6501 922 149 0 0 chr2 110197229 110197363 -143059220 + AluSg/x SINE Alu 164 297 -15 3456 182 36 28 chr2 110197417 110198132 -143058451 - L1MB8 LINE L1 -167 6509 5789 7329 232 36 11 chr2 110198154 110198763 -143057820 - L1MB8 LINE L1 -919 5725 5133 2257 124 0 3 chr2 110198763 110199061 -143057522 - AluSq SINE Alu -16 297 1 7329 232 36 11 chr2 110199061 110200375 -143056208 - L1MB8 LINE L1 -1511 5133 3754 959 216 4 74 chr2 110200388 110200619 -143055964 + MER58C DNA MER1_type 1 215 0 1782 257 86 56 chr2 110200624 110202684 -143053899 - L1MB8 LINE L1 -3439 3205 972 1001 187 46 49 chr2 110203127 110203378 -143053205 - MER31B LTR ERV1 0 661 411 2528 108 14 3 chr2 110203378 110203738 -143052845 + THE1B LTR MaLR 1 364 0 10943 110 31 1 chr2 110203738 110205272 -143051311 + THE1B-int LTR MaLR 1 1580 0 2702 113 3 0 chr2 110205272 110205635 -143050948 + THE1B LTR MaLR 1 364 0 1001 187 46 49 chr2 110205635 110205670 -143050913 - MER31B LTR ERV1 -247 414 182 3356 146 68 39 chr2 110205679 110206295 -143050288 - MER51A LTR ERV1 0 634 1 748 176 37 91 chr2 110206295 110206481 -143050102 - MER31B LTR ERV1 -290 176 1 1966 142 10 7 chr2 110206730 110207032 -143049551 + AluSx SINE Alu 1 303 -9 362 283 20 0 chr2 110207315 110207414 -143049169 - MER5A DNA MER1_type -6 183 83 446 273 40 84 chr2 110207565 110207685 -143048898 + MLT1I LTR MaLR 15 139 -270 2122 128 55 6 chr2 110207685 110208012 -143048571 + MER61A LTR ERV1 1 343 0 446 273 40 84 chr2 110208012 110208296 -143048287 + MLT1I LTR MaLR 139 401 -8 22 35 0 0 chr2 110208801 110208830 -143047753 + AT_rich Low_complexity Low_complexity 1 29 0 280 208 189 0 chr2 110209741 110209847 -143046736 - L1ME4a LINE L1 -30 6091 5966 2621 135 78 59 chr2 110209864 110209937 -143046646 - L1MA9 LINE L1 -80 6232 6162 4151 128 9 19 chr2 110209937 110210442 -143046141 + MER41B LTR ERV1 1 500 -135 1863 150 30 0 chr2 110210442 110210742 -143045841 - AluSx SINE Alu -3 309 1 4151 128 9 19 chr2 110210742 110210877 -143045706 + MER41B LTR ERV1 500 635 0 2621 135 78 59 chr2 110210877 110211223 -143045360 - L1MA9 LINE L1 -150 6162 5798 302 65 0 22 chr2 110211223 110211269 -143045314 + (TA)n Simple_repeat Simple_repeat 2 46 0 2621 135 78 59 chr2 110211269 110211388 -143045195 - L1MA9 LINE L1 -514 5798 5683 3146 106 4 9 chr2 110212228 110212680 -143043903 + LTR7 LTR ERV1 1 450 0 523 228 241 35 chr2 110212891 110213119 -143043464 - MLT1J LTR MaLR 0 511 237 1450 203 16 57 chr2 110213410 110213779 -143042804 + MER47A DNA MER2_type 13 366 0 1138 108 36 0 chr2 110214236 110214403 -143042180 - AluSq SINE Alu -12 301 129 368 275 99 29 chr2 110214526 110214697 -143041886 + MIR SINE MIR 23 205 -57 488 278 65 49 chr2 110215301 110215564 -143041019 + L1MC4a LINE L1 5060 5326 -820 993 249 183 39 chr2 110215573 110215791 -143040792 + L1MC4a LINE L1 5409 5594 -2214 2409 80 0 0 chr2 110215791 110216093 -143040490 + AluY SINE Alu 2 303 -8 993 249 183 39 chr2 110216093 110216296 -143040287 + L1MC4a LINE L1 5594 5767 -2041 1778 160 3 28 chr2 110216296 110216614 -143039969 + AluSx SINE Alu 1 310 -2 993 249 183 39 chr2 110216614 110216673 -143039910 + L1MC4a LINE L1 5767 5959 -1849 2133 126 8 67 chr2 110218598 110218956 -143037627 + MER1B DNA MER1_type 1 337 0 997 240 180 66 chr2 110219266 110219889 -143036694 - L1MC4a LINE L1 -1013 6795 6076 1824 156 0 17 chr2 110219889 110220191 -143036392 + AluJo SINE Alu 1 297 -15 997 240 180 66 chr2 110220191 110220295 -143036288 - L1MC4a LINE L1 -1732 6076 5985 1478 180 98 35 chr2 110220304 110220671 -143035912 - MLT1D LTR MaLR -112 393 4 546 200 6 11 chr2 110221711 110221891 -143034692 + CT-rich Low_complexity Low_complexity 2 180 0 445 295 47 21 chr2 110222251 110222441 -143034142 - MARNA DNA Mariner -163 423 229 498 352 14 9 chr2 110222838 110223057 -143033526 + L3 LINE CR1 1096 1315 -262 3345 145 12 24 chr2 110223978 110224187 -143032396 + L1PB4 LINE L1 5575 5785 -371 2317 103 0 0 chr2 110224187 110224499 -143032084 + AluSx SINE Alu 1 312 0 3345 145 12 24 chr2 110224499 110224875 -143031708 + L1PB4 LINE L1 5785 6153 -3 640 296 33 0 chr2 110225658 110225871 -143030712 - LTR67 LTR ERVL -12 545 326 261 233 0 0 chr2 110226656 110226716 -143029867 + MIR SINE MIR 67 126 -82 1174 186 70 20 chr2 110226808 110226872 -143029711 - L1ME3 LINE L1 -2 6160 6101 279 0 0 0 chr2 110226872 110226903 -143029680 + (CA)n Simple_repeat Simple_repeat 1 31 0 1174 186 70 20 chr2 110226903 110227139 -143029444 - L1ME3 LINE L1 -61 6101 5845 204 314 0 14 chr2 110227348 110227418 -143029165 + GA-rich Low_complexity Low_complexity 3 71 0 1812 154 0 10 chr2 110228101 110228393 -143028190 - AluJb SINE Alu -23 289 1 22 56 0 0 chr2 110228393 110228429 -143028154 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr2 110228597 110228625 -143027958 + AT_rich Low_complexity Low_complexity 1 28 0 1978 105 3 26 chr2 110228628 110228933 -143027650 - AluSx SINE Alu -14 298 1 1906 122 61 3 chr2 110228937 110229248 -143027335 - L1PA16 LINE L1 -9 6157 5829 2065 96 0 16 chr2 110229276 110229579 -143027004 + AluSq SINE Alu 1 298 -15 9138 183 96 53 chr2 110229657 110231013 -143025570 + L1MC3 LINE L1 5430 6726 -1059 1851 117 3 69 chr2 110231013 110231346 -143025237 + AluSx SINE Alu 1 311 -1 9138 183 96 53 chr2 110231346 110231581 -143025002 + L1MC3 LINE L1 6726 6949 -836 252 317 12 0 chr2 110231581 110231663 -143024920 + MLT1F1 LTR MaLR 35 117 -450 9138 183 96 53 chr2 110231663 110232041 -143024542 + L1MC3 LINE L1 6949 7309 -476 2150 113 3 0 chr2 110232041 110232343 -143024240 + AluSx SINE Alu 1 303 -9 9138 183 96 53 chr2 110232343 110232542 -143024041 + L1MC3 LINE L1 7309 7778 -7 1877 62 12 23 chr2 110233618 110233877 -143022706 + L1PA7 LINE L1 5896 6151 -3 756 230 52 0 chr2 110233897 110234071 -143022512 + MER5A DNA MER1_type 7 189 0 400 234 171 51 chr2 110234133 110234291 -143022292 - MER5B DNA MER1_type -1 177 1 737 163 111 58 chr2 110234338 110234510 -143022073 - MER5A DNA MER1_type -8 181 1 911 176 68 31 chr2 110234734 110234956 -143021627 + MLT1D LTR MaLR 4 233 -272 724 216 70 0 chr2 110235001 110235172 -143021411 + MLT1D LTR MaLR 317 499 -6 215 31 31 0 chr2 110235172 110235204 -143021379 + (TC)n Simple_repeat Simple_repeat 1 33 0 * 246 160 0 0 chr2 110235203 110235253 -143021330 + (CA)n Simple_repeat Simple_repeat 1 50 0 216 239 166 92 chr2 110235321 110235484 -143021099 - MIR SINE MIR -67 195 21 2079 125 7 0 chr2 110236261 110236565 -143020018 + AluSg SINE Alu 1 306 -4 586 241 80 19 chr2 110236979 110237096 -143019487 - MIR SINE MIR -25 237 129 2080 104 3 16 chr2 110237096 110237412 -143019171 - AluSx SINE Alu 0 312 1 586 241 80 19 chr2 110237412 110237506 -143019077 - MIR SINE MIR -133 129 13 285 327 173 0 chr2 110237673 110237783 -143018800 - MIR SINE MIR -131 131 3 221 325 58 0 chr2 110237783 110237897 -143018686 + MIR SINE MIR 142 262 0 1576 159 303 25 chr2 110238723 110239107 -143017476 + Charlie1 DNA MER1_type 2131 2407 -354 2136 91 28 0 chr2 110239107 110239394 -143017189 + AluSx SINE Alu 1 295 -17 1576 159 303 25 chr2 110239394 110239498 -143017085 + Charlie1 DNA MER1_type 2407 2755 -6 476 314 201 22 chr2 110239505 110239868 -143016715 - L3 LINE CR1 -45 1532 1105 1941 119 4 0 chr2 110240434 110240745 -143015838 + AluSg SINE Alu 1 312 0 182 378 118 0 chr2 110242182 110242301 -143014282 + MIR SINE MIR 111 243 -19 640 295 118 53 chr2 110243039 110243517 -143013066 + L2 LINE L2 2174 2687 -627 1655 165 7 0 chr2 110243517 110243831 -143012752 + AluJb SINE Alu 3 318 0 640 295 118 53 chr2 110243831 110243843 -143012740 + L2 LINE L2 2687 2697 -617 382 250 136 65 chr2 110243924 110244108 -143012475 - HAL1 LINE L1 -1486 1021 825 1594 243 80 23 chr2 110244526 110245011 -143011572 - L1M4 LINE L1 -922 5224 4695 1886 131 31 0 chr2 110245011 110245301 -143011282 - AluSx SINE Alu -13 299 1 1594 243 80 23 chr2 110245301 110245428 -143011155 - L1M4 LINE L1 -1451 4695 4577 803 278 61 41 chr2 110245430 110245793 -143010790 - L1MEc LINE L1 -4391 2005 1636 * 951 315 41 53 chr2 110245774 110246532 -143010051 - L1MEc LINE L1 -5621 775 27 1846 103 0 46 chr2 110246541 110246822 -143009761 + AluSg SINE Alu 21 288 -22 321 248 0 69 chr2 110246822 110246923 -143009660 - L1MC4 LINE L1 -1340 6702 6609 313 257 0 79 chr2 110246861 110246962 -143009621 + L1MC4 LINE L1 6614 6706 -1336 * 291 28 0 0 chr2 110247274 110247310 -143009273 + (TG)n Simple_repeat Simple_repeat 1 36 0 1885 127 46 0 chr2 110247376 110247660 -143008923 + AluSx SINE Alu 1 297 -15 693 36 0 0 chr2 110247671 110247755 -143008828 + (GGAA)n Simple_repeat Simple_repeat 1 84 0 1220 202 126 0 chr2 110248132 110248394 -143008189 - AluJo SINE Alu -7 295 1 219 330 136 0 chr2 110251002 110251105 -143005478 + L2 LINE L2 3151 3267 -5 352 197 139 41 chr2 110251979 110252200 -143004383 - MLT1H LTR MaLR -7 560 352 517 274 28 22 chr2 110252546 110252725 -143003858 + L1ME1 LINE L1 5594 5773 -393 806 246 182 35 chr2 110252905 110253417 -143003166 - LTR1B LTR ERV1 -207 619 33 1257 190 76 41 chr2 110253418 110253786 -143002797 + L1ME1 LINE L1 5781 6161 -5 1699 58 0 0 chr2 110254647 110254855 -143001728 + L1PA7 LINE L1 5939 6146 -8 238 240 200 48 chr2 110255051 110255176 -143001407 + MIR3 SINE MIR 3 146 -62 227 233 33 0 chr2 110257263 110257323 -142999260 - L2 LINE L2 -213 3059 2998 2067 243 49 11 chr2 110257325 110257859 -142998724 + MLT1H1 LTR MaLR 1 554 -1 2123 146 11 27 chr2 110258239 110258609 -142997974 - MLT1A1 LTR MaLR 0 365 2 384 230 56 24 chr2 110258686 110258812 -142997771 - L1MC5 LINE L1 -171 7790 7661 284 259 301 12 chr2 110259288 110259454 -142997129 - MIR SINE MIR 0 262 49 391 264 141 31 chr2 110259618 110259781 -142996802 + MER5A DNA MER1_type 9 189 0 2103 177 11 0 chr2 110259912 110260273 -142996310 + MLT1A1 LTR MaLR 1 365 0 2127 92 3 0 chr2 110260448 110260731 -142995852 - AluSx SINE Alu -18 294 11 1909 110 11 3 chr2 110261256 110261538 -142995045 + AluSq SINE Alu 1 284 -29 202 304 22 0 chr2 110262089 110262181 -142994402 + GA-rich Low_complexity Low_complexity 4 97 0 21 0 0 0 chr2 110262322 110262343 -142994240 + GC_rich Low_complexity Low_complexity 1 21 0 2143 100 0 42 chr2 110262850 110263160 -142993423 - AluSp SINE Alu -16 297 1 1830 119 7 40 chr2 110263215 110263518 -142993065 - AluJo SINE Alu -15 297 5 804 306 71 55 chr2 110264191 110264491 -142992092 - L3 LINE CR1 -7 1570 1276 959 87 11 33 chr2 110264491 110264675 -142991908 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 804 306 71 55 chr2 110264675 110264707 -142991876 - L3 LINE CR1 -301 1276 1246 2019 138 0 3 chr2 110264707 110265012 -142991571 - AluSx SINE Alu -8 304 1 804 306 71 55 chr2 110265012 110265350 -142991233 - L3 LINE CR1 -331 1246 888 623 229 8 0 chr2 110265505 110265636 -142990947 + MER94 DNA DNA 3 134 0 266 309 0 12 chr2 110266046 110266127 -142990456 - Charlie4a DNA MER1_type 0 508 429 255 215 163 21 chr2 110266529 110266673 -142989910 - MLT1C LTR MaLR -166 224 110 300 233 17 0 chr2 110266706 110266766 -142989817 + L1MEc LINE L1 2153 2213 -4183 351 213 138 11 chr2 110266769 110266872 -142989711 - MLT1C LTR MaLR -353 114 11 195 346 22 73 chr2 110267753 110267889 -142988694 + MIR SINE MIR 18 146 -62 199 273 68 34 chr2 110268318 110268406 -142988177 - L2 LINE L2 -10 3303 3213 318 279 18 45 chr2 110270285 110270396 -142986187 - L1ME LINE L1 -296 5825 5718 328 260 50 0 chr2 110270423 110270523 -142986060 - MIR SINE MIR -10 252 148 2104 107 3 3 chr2 110270816 110271115 -142985468 + AluSx SINE Alu 1 299 -13 2015 124 3 16 chr2 110271410 110271725 -142984858 + AluSq SINE Alu 1 311 -2 332 212 165 82 chr2 110272009 110272179 -142984404 - MER5A DNA MER1_type -5 184 1 301 324 101 7 chr2 110272453 110272592 -142983991 + L2 LINE L2 3121 3272 0 3372 123 58 11 chr2 110274389 110274958 -142981625 - L1MB3 LINE L1 -7 6176 5581 402 115 0 0 chr2 110274958 110275010 -142981573 + AluS SINE Alu 6 57 -243 1328 98 0 0 chr2 110275012 110275196 -142981387 + AluSg/x SINE Alu 123 306 -6 355 105 18 18 chr2 110275196 110275253 -142981330 - L1MB3 LINE L1 -575 5596 5540 2121 273 137 31 chr2 110275260 110277105 -142979478 - L1MEd LINE L1 -1978 4151 2111 527 313 106 18 chr2 110277573 110277903 -142978680 - L1MEd LINE L1 -4779 1531 1125 437 259 120 53 chr2 110277913 110278306 -142978277 - L1MEd LINE L1 -5173 946 528 1608 208 41 8 chr2 110278763 110279152 -142977431 - Charlie4a DNA MER1_type -70 438 37 190 356 76 25 chr2 110279317 110279435 -142977148 + L2 LINE L2 3186 3309 -4 294 252 72 45 chr2 110279479 110279590 -142976993 - MIR3 SINE MIR -48 160 47 1750 145 17 3 chr2 110279851 110280141 -142976442 - AluJo SINE Alu -17 295 2 467 246 42 30 chr2 110280446 110280613 -142975970 + L3 LINE CR1 1197 1365 -212 199 316 0 0 chr2 110280908 110280965 -142975618 - MIR SINE MIR -59 149 93 5607 227 114 35 chr2 110281902 110285528 -142971055 - L1MDa LINE L1 -2221 4319 170 2001 169 26 26 chr2 110285528 110285918 -142970665 - MLT1B LTR MaLR 0 390 1 5607 227 114 35 chr2 110285918 110286093 -142970490 - L1MDa LINE L1 -6370 170 10 1676 201 70 9 chr2 110287063 110287407 -142969176 - MLT1A1 LTR MaLR 0 365 1 23 0 0 0 chr2 110287851 110287874 -142968709 + AT_rich Low_complexity Low_complexity 1 23 0 260 247 169 0 chr2 110287874 110287951 -142968632 + L2 LINE L2 2454 2543 -771 467 283 16 0 chr2 110290161 110290341 -142966242 + L1MA10 LINE L1 5990 6329 -3 22 0 0 0 chr2 110290403 110290425 -142966158 + AT_rich Low_complexity Low_complexity 1 22 0 181 295 82 0 chr2 110290797 110290858 -142965725 + MIR3 SINE MIR 137 202 -6 201 254 64 55 chr2 110290966 110291076 -142965507 - L2 LINE L2 -17 3255 3145 259 242 0 13 chr2 110291557 110291706 -142964877 + (TG)n Simple_repeat Simple_repeat 1 147 0 301 323 0 0 chr2 110291722 110291849 -142964734 + (TG)n Simple_repeat Simple_repeat 1 127 0 421 268 176 13 chr2 110292952 110293105 -142963478 - MER5A DNA MER1_type -1 188 11 610 353 29 8 chr2 110295726 110295964 -142960619 + L3 LINE CR1 1250 1492 -85 239 135 0 77 chr2 110296658 110296710 -142959873 + L1MC5 LINE L1 7723 7770 -191 23 33 0 0 chr2 110300207 110300237 -142956346 + AT_rich Low_complexity Low_complexity 1 30 0 276 222 50 71 chr2 110300817 110300916 -142955667 + MER5B DNA MER1_type 75 171 -7 261 304 77 44 chr2 110300962 110301143 -142955440 + L2 LINE L2 2876 3062 -210 2301 71 3 0 chr2 110301641 110301938 -142954645 + AluSp SINE Alu 3 300 -13 212 274 0 0 chr2 110302401 110302452 -142954131 - MIR SINE MIR -62 146 96 2683 147 35 4 chr2 110304635 110305098 -142951485 + MER31A LTR ERV1 1 477 -8 315 355 120 0 chr2 110306499 110306682 -142949901 - L2 LINE L2 0 3313 3109 264 304 200 22 chr2 110306870 110307100 -142949483 - L2 LINE L2 -579 2735 2465 321 311 25 16 chr2 110307379 110307501 -142949082 + MIR SINE MIR 48 170 -92 243 164 16 16 chr2 110309268 110309329 -142947254 + L1ME4a LINE L1 6057 6117 -4 3884 156 43 3 chr2 110312035 110312726 -142943857 + LTR62 LTR ERVK 1 719 0 2666 171 111 13 chr2 110312777 110313328 -142943255 + MER6A DNA MER2_type 1 605 0 239 233 0 33 chr2 110316974 110317034 -142939549 + MIR SINE MIR 205 262 0 241 250 0 33 chr2 110317037 110317097 -142939486 + MIR SINE MIR 205 262 0 2665 196 59 62 chr2 110322494 110323192 -142933391 - L1MD1 LINE L1 -7 6235 5540 1193 179 117 11 chr2 110324182 110324611 -142931972 + MLT2B1 LTR ERVL 1 519 -1 21 0 0 0 chr2 110326687 110326708 -142929875 + AT_rich Low_complexity Low_complexity 1 21 0 44270 29 21 1 chr2 110326728 110332761 -142923822 + L1PA2 LINE L1 1 6155 0 204 40 0 0 chr2 110332801 110332826 -142923757 + (A)n Simple_repeat Simple_repeat 1 25 0 2130 115 3 23 chr2 110333342 110333647 -142922936 + AluSq SINE Alu 1 299 -14 31 0 0 0 chr2 110333647 110333678 -142922905 + AT_rich Low_complexity Low_complexity 1 31 0 358 318 23 8 chr2 110336462 110336591 -142919992 + MIR SINE MIR 111 241 -21 231 305 49 0 chr2 110336862 110336944 -142919639 + L1MC4a LINE L1 5706 5791 -379 325 250 121 8 chr2 110337008 110337132 -142919451 + L1MC4a LINE L1 5777 5914 -1894 1937 146 41 0 chr2 110337286 110337581 -142919002 - AluJb SINE Alu -5 307 1 1903 170 0 3 chr2 110337698 110338004 -142918579 - AluSx SINE Alu -7 305 1 1058 253 7 3 chr2 110338199 110338484 -142918099 - L1M4 LINE L1 -3204 2942 2657 351 105 0 0 chr2 110338722 110338779 -142917804 + (TG)n Simple_repeat Simple_repeat 2 58 0 2136 77 0 4 chr2 110338999 110339271 -142917312 + AluY SINE Alu 41 311 0 1215 223 102 91 chr2 110339331 110339934 -142916649 - MLT1E2 LTR MaLR -5 621 32 1388 194 15 4 chr2 110340488 110340751 -142915832 - MLT1A1 LTR MaLR -99 266 1 2197 104 24 3 chr2 110342334 110342632 -142913951 + AluSx SINE Alu 6 309 -3 1017 177 39 33 chr2 110342683 110342705 -142913878 + MER49 LTR ERV1 1 21 -902 1731 157 54 0 chr2 110342705 110342985 -142913598 + AluSx SINE Alu 1 295 -17 1017 177 39 33 chr2 110342985 110343208 -142913375 + MER49 LTR ERV1 21 294 -629 372 228 0 0 chr2 110343247 110343326 -142913257 + LTR39 LTR ERV1 392 470 -313 635 160 0 0 chr2 110343326 110343432 -142913151 + AluJb SINE Alu 195 300 -12 1022 226 45 19 chr2 110343435 110343701 -142912882 + MER4D LTR ERV1 631 903 0 1652 174 105 11 chr2 110345160 110345522 -142911061 + MSTD LTR MaLR 1 396 0 4183 230 101 72 chr2 110345522 110347112 -142909471 + MSTD-int LTR MaLR 1 1636 -15 1723 131 157 12 chr2 110347125 110347469 -142909114 + MSTD LTR MaLR 1 394 -2 811 188 25 0 chr2 110347870 110348030 -142908553 + L1M4b LINE L1 12 175 -6684 1834 130 34 0 chr2 110348031 110348300 -142908283 + AluSx SINE Alu 35 312 0 378 219 0 25 chr2 110348300 110348419 -142908164 + GA-rich Low_complexity Low_complexity 1 116 0 331 134 0 62 chr2 110348547 110348644 -142907939 + (GAAA)n Simple_repeat Simple_repeat 4 94 0 303 225 345 7 chr2 110348644 110348786 -142907797 + L1M4b LINE L1 159 348 -6511 3888 206 109 67 chr2 110348801 110349545 -142907038 + L1M4b LINE L1 475 1186 -5771 195 42 0 0 chr2 110349545 110349569 -142907014 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 3888 206 109 67 chr2 110349569 110349794 -142906789 + L1M4b LINE L1 1186 1400 -5557 400 59 0 0 chr2 110349794 110349845 -142906738 - MADE1 DNA Mariner 0 80 30 3888 206 109 67 chr2 110349845 110350334 -142906249 + L1M4b LINE L1 1400 2161 -4796 1596 195 156 20 chr2 110350340 110350745 -142905838 + MLT1C LTR MaLR 6 465 -2 669 261 135 22 chr2 110350747 110350846 -142905737 + L1M4b LINE L1 2050 2136 -4823 2135 154 91 15 chr2 110350846 110351242 -142905341 - MSTB LTR MaLR 0 426 1 669 261 135 22 chr2 110351242 110351460 -142905123 + L1M4b LINE L1 2136 2403 -4556 1453 155 6 23 chr2 110351473 110351778 -142904805 + Tigger3(Golem) DNA MER2_type 2661 3028 -1 2193 173 46 21 chr2 110351779 110352552 -142904031 + L1MB7 LINE L1 4838 5625 -559 1907 154 20 20 chr2 110352565 110352909 -142903674 + MER2 DNA MER2_type 1 344 0 1995 173 46 29 chr2 110352910 110353321 -142903262 + L1MB7 LINE L1 5767 6184 0 2249 216 87 20 chr2 110353493 110354048 -142902535 + L1MB7 LINE L1 5577 6168 -16 307 243 135 75 chr2 110354499 110354771 -142901812 + LTR8 LTR ERV1 1 281 -446 969 205 111 68 chr2 110354828 110355243 -142901340 + LTR8A LTR ERV1 288 720 -7 530 167 0 22 chr2 110357229 110357319 -142899264 - AluJ/FRAM SINE Alu -10 302 215 * 693 144 93 0 chr2 110357316 110357434 -142899149 - AluJo/FLAM SINE Alu -182 130 2 2062 139 75 21 chr2 110362289 110362676 -142893907 - LTR23 LTR ERV1 -27 410 3 508 213 123 0 chr2 110362739 110362861 -142893722 - FLAM_A SINE Alu -5 137 1 233 317 48 29 chr2 110362926 110363030 -142893553 - MIR3 SINE MIR -7 201 96 199 226 49 108 chr2 110363317 110363419 -142893164 - L2 LINE L2 -7 3265 3170 521 273 189 42 chr2 110363740 110363772 -142892811 + L1ME4a LINE L1 5581 5607 -514 4083 89 11 25 chr2 110363772 110363919 -142892664 + MER41A LTR ERV1 1 149 -405 2072 119 3 0 chr2 110363919 110364213 -142892370 + AluSq SINE Alu 1 295 -18 4083 89 11 25 chr2 110364213 110364627 -142891956 + MER41A LTR ERV1 149 554 0 521 273 189 42 chr2 110364627 110365027 -142891556 + L1ME4a LINE L1 5607 6077 -44 1414 169 46 14 chr2 110365459 110365743 -142890840 + AluJb SINE Alu 6 298 -14 33 0 0 0 chr2 110367102 110367135 -142889448 + AT_rich Low_complexity Low_complexity 1 33 0 184 244 0 22 chr2 110368491 110368536 -142888047 - L2 LINE L2 -15 3257 3214 296 287 23 11 chr2 110368685 110368772 -142887811 + MER5A DNA MER1_type 76 163 -26 1041 235 134 13 chr2 110368864 110369251 -142887332 + L2 LINE L2 2871 3304 -9 1756 158 31 3 chr2 110369319 110369610 -142886973 + AluJb SINE Alu 1 299 -13 1249 220 63 7 chr2 110369627 110369927 -142886656 - MER58B DNA MER1_type -24 317 1 183 123 88 105 chr2 110370215 110370272 -142886311 + MER5A DNA MER1_type 134 189 0 185 266 62 31 chr2 110370823 110370887 -142885696 - MIR SINE MIR -65 143 78 188 175 18 105 chr2 110371138 110371195 -142885388 + L2 LINE L2 2399 2450 -864 631 280 165 46 chr2 110371478 110371956 -142884627 + MLT1H1 LTR MaLR 20 554 -1 2177 122 0 0 chr2 110373218 110373530 -142883053 - AluSx SINE Alu 0 312 1 1276 103 6 0 chr2 110373686 110373861 -142882722 + MLT1A1 LTR MaLR 176 351 -14 291 280 43 0 chr2 110373872 110373965 -142882618 + MER5A DNA MER1_type 93 189 0 234 233 0 0 chr2 110374465 110374525 -142882058 + (TATATG)n Simple_repeat Simple_repeat 2 61 0 323 268 0 82 chr2 110374534 110374631 -142881952 + L1MC4 LINE L1 6615 6703 -1339 207 188 0 0 chr2 110374631 110374679 -142881904 + (TG)n Simple_repeat Simple_repeat 2 49 0 2182 89 0 10 chr2 110375855 110376148 -142880435 + AluSg SINE Alu 1 290 -20 1799 129 14 3 chr2 110377466 110377761 -142878822 + AluSx SINE Alu 1 298 -14 893 116 254 0 chr2 110378189 110378370 -142878213 + MER30 DNA MER1_type 4 230 0 241 214 0 0 chr2 110378718 110378760 -142877823 + MIR SINE MIR 110 151 -111 180 0 0 0 chr2 110379270 110379290 -142877293 + (A)n Simple_repeat Simple_repeat 1 20 0 2171 111 0 13 chr2 110379939 110380255 -142876328 + AluSx SINE Alu 1 312 0 1903 167 58 9 chr2 110380471 110380819 -142875764 - MLT1A1 LTR MaLR 0 365 1 305 264 129 36 chr2 110381397 110381537 -142875046 - MER21B LTR ERV1 -53 810 658 328 250 36 0 chr2 110381647 110381731 -142874852 + MLT1D LTR MaLR 20 106 -399 240 303 101 8 chr2 110382038 110382157 -142874426 - MER21B LTR ERV1 -76 787 658 678 247 38 73 chr2 110382253 110382670 -142873913 + MLT1D LTR MaLR 5 390 0 302 268 60 18 chr2 110382677 110382866 -142873717 + L1MC5 LINE L1 7004 7221 -597 300 188 38 12 chr2 110383006 110383086 -142873497 + L1MC4 LINE L1 7470 7551 -491 305 309 21 10 chr2 110383091 110383188 -142873395 - L1MC4 LINE L1 -1344 6698 6601 1077 160 0 0 chr2 110383315 110383490 -142873093 + FRAM SINE Alu 1 170 -6 571 283 45 35 chr2 110383500 110383811 -142872772 + L1MC4 LINE L1 7689 8002 -40 2236 89 3 3 chr2 110384386 110384690 -142871893 - AluSq SINE Alu -9 304 1 511 241 321 32 chr2 110385013 110385515 -142871068 + HAL1 LINE L1 274 920 -1587 837 224 121 49 chr2 110385526 110385932 -142870651 + HAL1 LINE L1 991 1425 -1082 293 279 118 84 chr2 110385932 110386323 -142870260 - MLT1I LTR MaLR 0 409 6 1150 263 217 36 chr2 110386362 110387112 -142869471 + HAL1 LINE L1 1491 2412 -95 2257 87 10 0 chr2 110387112 110387412 -142869171 + AluSp SINE Alu 1 303 -10 1150 263 217 36 chr2 110387412 110387504 -142869079 + HAL1 LINE L1 2412 2486 -21 184 98 24 24 chr2 110388222 110388263 -142868320 + (CCTG)n Simple_repeat Simple_repeat 1 41 0 264 316 48 37 chr2 110388295 110388482 -142868101 + L2 LINE L2 2871 3059 -213 776 177 55 28 chr2 110388584 110388765 -142867818 + MER5A DNA MER1_type 1 186 -3 2461 40 0 7 chr2 110388922 110389220 -142867363 + AluY SINE Alu 2 297 -14 676 251 70 28 chr2 110389340 110389555 -142867028 + MIR SINE MIR 39 262 0 24 0 0 0 chr2 110390661 110390685 -142865898 + GC_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr2 110390726 110390755 -142865828 + GC_rich Low_complexity Low_complexity 1 29 0 186 43 0 0 chr2 110390950 110390973 -142865610 + (CGG)n Simple_repeat Simple_repeat 3 25 0 29 0 0 0 chr2 110390992 110391021 -142865562 + GC_rich Low_complexity Low_complexity 1 29 0 207 239 70 14 chr2 110392264 110392335 -142864248 + L3 LINE CR1 1395 1469 -108 359 248 21 78 chr2 110393314 110393383 -142863200 - MIR SINE MIR -6 256 197 1712 138 79 62 chr2 110393383 110393530 -142863053 + THE1C LTR MaLR 1 144 -231 2286 85 0 0 chr2 110393530 110393823 -142862760 - AluSx SINE Alu -19 293 1 1712 138 79 62 chr2 110393823 110394044 -142862539 + THE1C LTR MaLR 144 375 0 359 248 21 78 chr2 110394044 110394115 -142862468 - MIR SINE MIR -65 197 124 377 158 49 0 chr2 110394135 110394217 -142862366 - L1MA8 LINE L1 -4 6287 6202 1117 179 0 6 chr2 110394223 110394441 -142862142 - L1M3 LINE L1 -432 5739 5526 2228 116 0 0 chr2 110395105 110395416 -142861167 + AluSx SINE Alu 1 311 -1 398 256 51 26 chr2 110395890 110396007 -142860576 + LTR33A LTR ERVL 404 523 0 664 181 14 0 chr2 110396377 110396515 -142860068 - L1MC3 LINE L1 0 7785 7646 614 180 0 55 chr2 110396504 110396632 -142859951 - L1MC3 LINE L1 -464 7321 7201 * 290 308 0 0 chr2 110396641 110396732 -142859851 - MLT1F1 LTR MaLR -442 125 35 3645 144 69 26 chr2 110396732 110397411 -142859172 - L1MC3 LINE L1 -688 7097 6390 333 0 0 0 chr2 110397464 110397501 -142859082 + (CA)n Simple_repeat Simple_repeat 1 37 0 234 282 153 16 chr2 110398128 110398252 -142858331 + MER117 DNA MER1_type 1 141 -56 339 324 54 9 chr2 110398669 110398780 -142857803 - MER91B DNA MER1_type 0 190 75 212 200 18 0 chr2 110398780 110398835 -142857748 + (TA)n Simple_repeat Simple_repeat 2 57 0 259 181 167 0 chr2 110398835 110398907 -142857676 - MER91B DNA MER1_type -98 92 9 228 225 0 0 chr2 110399336 110399376 -142857207 - MARNA DNA Mariner -479 107 68 1845 126 38 7 chr2 110399849 110400142 -142856441 + L1MB2 LINE L1 5735 6036 -135 614 222 24 0 chr2 110400143 110400269 -142856314 + MER4C LTR ERV1 337 465 0 313 279 99 50 chr2 110400487 110400648 -142855935 + MIR SINE MIR 37 205 -57 188 259 0 56 chr2 110402388 110402442 -142854141 - MIR3 SINE MIR -12 196 146 1813 108 4 0 chr2 110402947 110403206 -142853377 - AluSp SINE Alu 0 313 54 277 361 33 0 chr2 110403449 110403571 -142853012 - MIR3 SINE MIR -76 132 7 * 355 146 0 0 chr2 110403559 110403614 -142852969 - L2 LINE L2 0 3272 3218 181 226 0 75 chr2 110403598 110403651 -142852932 + L2 LINE L2 3264 3312 -1 * 183 264 19 0 chr2 110404997 110405050 -142851533 - MIR SINE MIR -20 242 189 971 222 294 14 chr2 110405054 110405539 -142851044 - L2 LINE L2 -5 3308 2714 453 193 23 0 chr2 110405535 110405623 -142850960 - MIR SINE MIR -121 141 52 * 250 266 44 44 chr2 110406099 110406257 -142850326 + MER48 LTR ERV1 227 384 -3 288 0 0 0 chr2 110406285 110406317 -142850266 + (A)n Simple_repeat Simple_repeat 1 32 0 1142 154 0 20 chr2 110406317 110406518 -142850065 - AluJb SINE Alu -31 281 85 1854 133 19 10 chr2 110407097 110407406 -142849177 - AluSq SINE Alu -1 312 1 247 308 44 11 chr2 110408294 110408385 -142848198 - MIR3 SINE MIR -48 160 67 344 272 174 16 chr2 110408548 110408753 -142847830 + MIR SINE MIR 1 229 -33 2140 125 3 0 chr2 110409624 110409935 -142846648 + AluSp SINE Alu 1 312 -1 2628 195 61 0 chr2 110409943 110410533 -142846050 + L1 LINE L1 3165 3790 -2356 1561 108 0 0 chr2 110410533 110410745 -142845838 + AluSq SINE Alu 1 212 -101 215 219 0 0 chr2 110411035 110411076 -142845507 + (CACCAT)n Simple_repeat Simple_repeat 4 44 0 189 313 76 76 chr2 110411184 110411328 -142845255 - L2 LINE L2 -212 3060 2917 634 270 136 58 chr2 110411396 110411778 -142844805 - L1M4 LINE L1 -1145 5001 4590 2186 126 0 3 chr2 110412108 110412409 -142844174 + AluSx SINE Alu 1 300 -12 399 271 93 21 chr2 110412776 110412916 -142843667 - L2 LINE L2 -5 3308 3159 2135 125 29 5 chr2 110413526 110413902 -142842681 - L1 LINE L1 -1637 4509 4125 1026 282 62 60 chr2 110414215 110414665 -142841918 - MER21B LTR ERV1 -151 712 262 2486 41 23 73 chr2 110414815 110415158 -142841425 - LTR17 LTR ERV1 -454 326 1 2308 57 18 0 chr2 110415160 110415443 -142841140 - HERV17 LTR ERV1 -3 8623 8336 296 77 0 0 chr2 110415434 110415473 -142841110 - HERV17 LTR ERV1 -1078 7548 7510 * 9608 50 2 12 chr2 110415466 110415784 -142840799 - HERV17 LTR ERV1 -2607 6019 5699 2391 85 7 3 chr2 110415784 110416090 -142840493 - AluY SINE Alu -4 307 1 9608 50 2 12 chr2 110416090 110416932 -142839651 - HERV17 LTR ERV1 -2927 5699 4871 664 189 28 0 chr2 110417036 110417179 -142839404 + L1 LINE L1 2816 2962 -3184 2058 113 10 42 chr2 110417179 110417325 -142839258 + AluSc SINE Alu 1 150 -159 4079 103 9 46 chr2 110417325 110417954 -142838629 - LTR14B LTR ERVK 0 608 3 2058 113 10 42 chr2 110417954 110418117 -142838466 + AluSc SINE Alu 150 300 -9 2831 185 33 22 chr2 110418117 110418366 -142838217 + L1 LINE L1 2952 3197 -2949 2236 99 36 7 chr2 110418366 110418670 -142837913 + AluSp SINE Alu 1 313 0 2831 185 33 22 chr2 110418670 110419108 -142837475 + L1 LINE L1 3197 3647 -2499 1405 164 34 96 chr2 110419108 110419738 -142836845 - MER4C LTR ERV1 0 465 1 2473 174 58 31 chr2 110419738 110419967 -142836616 + L1 LINE L1 3644 3865 -2281 1636 158 50 20 chr2 110419967 110420264 -142836319 + AluJb SINE Alu 1 306 -6 2473 174 58 31 chr2 110420264 110420585 -142835998 + L1 LINE L1 3865 4209 -1937 2752 160 63 69 chr2 110420585 110421375 -142835208 + MER21A LTR ERV1 24 925 -6 474 211 55 0 chr2 110421395 110421504 -142835079 + L1MA5 LINE L1 3535 3649 -2497 563 148 0 11 chr2 110421504 110421592 -142834991 - MER4C LTR ERV1 -2 463 377 6215 141 12 18 chr2 110421632 110423055 -142833528 + L1MA5 LINE L1 4262 5687 -613 1948 109 84 0 chr2 110423695 110423969 -142832614 + AluSg SINE Alu 1 297 -13 3779 139 15 2 chr2 110425229 110425846 -142830737 + L1MA5 LINE L1 5676 6300 0 3734 222 48 107 chr2 110425852 110426521 -142830062 - L1 LINE L1 -1287 5095 4388 2037 147 3 0 chr2 110426521 110426813 -142829770 - AluSx SINE Alu -19 293 1 953 128 0 0 chr2 110426820 110426953 -142829630 - AluJb SINE Alu -179 133 1 3734 222 48 107 chr2 110426953 110427147 -142829436 - L1 LINE L1 -2000 4382 4178 2060 115 0 7 chr2 110427147 110427474 -142829109 - AluSx SINE Alu 0 325 1 3734 222 48 107 chr2 110427474 110427685 -142828898 - L1 LINE L1 -2204 4178 3956 2431 92 3 0 chr2 110427685 110427991 -142828592 - AluSx SINE Alu -5 307 1 3734 222 48 107 chr2 110427991 110428443 -142828140 - L1 LINE L1 -2426 3956 3525 210 37 0 0 chr2 110428760 110428787 -142827796 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1705 130 10 48 chr2 110429279 110429375 -142827208 - MSTA LTR MaLR -147 281 183 2851 22 0 0 chr2 110429375 110429686 -142826897 - AluYa5 SINE Alu 0 311 1 1705 130 10 48 chr2 110429686 110429881 -142826702 - MSTA LTR MaLR -245 183 1 190 288 45 30 chr2 110429994 110430060 -142826523 - L2 LINE L2 -1 3271 3205 443 290 151 42 chr2 110430590 110431021 -142825562 - MLT1L LTR MaLR -1 614 137 2469 74 0 0 chr2 110431375 110431673 -142824910 + AluY SINE Alu 1 298 -13 245 347 21 0 chr2 110431946 110432041 -142824542 + MLT2E LTR ERVL 77 173 -455 216 67 0 0 chr2 110432394 110432424 -142824159 + (CA)n Simple_repeat Simple_repeat 1 30 0 774 274 81 36 chr2 110432446 110432916 -142823667 - L1ME4a LINE L1 -104 6017 5527 3695 210 50 19 chr2 110433311 110434921 -142821662 - L1 LINE L1 -2847 3535 1770 2067 143 3 0 chr2 110435188 110435495 -142821088 + AluSg SINE Alu 1 308 -2 1823 152 0 46 chr2 110435818 110436141 -142820442 + AluJb SINE Alu 1 308 -4 647 130 0 0 chr2 110436181 110436273 -142820310 + AluSx SINE Alu 2 93 -220 2178 117 7 0 chr2 110436274 110436572 -142820011 + AluSg SINE Alu 1 300 -10 1474 128 5 0 chr2 110436572 110436846 -142819737 + AluSx SINE Alu 80 355 0 1157 108 60 0 chr2 110437243 110437409 -142819174 + AluSg/x SINE Alu 135 310 0 438 319 65 17 chr2 110437457 110437560 -142819023 + L1MC4 LINE L1 5448 5545 -576 225 0 0 0 chr2 110437560 110437585 -142818998 + (TG)n Simple_repeat Simple_repeat 2 26 0 438 319 65 17 chr2 110437585 110437840 -142818743 + L1MC4 LINE L1 5545 5820 -301 2247 70 0 0 chr2 110437849 110438121 -142818462 + AluY SINE Alu 1 272 -39 2211 114 0 7 chr2 110438799 110439098 -142817485 - AluSq SINE Alu -16 297 1 2064 133 0 3 chr2 110439595 110439889 -142816694 - AluSx SINE Alu -19 293 1 255 305 19 39 chr2 110440476 110440630 -142815953 - L2 LINE L2 -168 3104 2954 2301 110 3 3 chr2 110440819 110441157 -142815426 - AluSx SINE Alu 0 338 1 2283 108 0 52 chr2 110441372 110441697 -142814886 - AluSx SINE Alu -4 308 1 860 148 0 0 chr2 110441699 110441850 -142814733 - AluSg/x SINE Alu 0 312 166 332 163 0 0 chr2 110441956 110442005 -142814578 - AluS SINE Alu -22 278 230 2561 54 3 0 chr2 110442015 110442311 -142814272 - AluY SINE Alu -14 297 1 845 197 16 37 chr2 110442799 110442987 -142813596 + MER5A DNA MER1_type 1 184 -5 195 69 0 0 chr2 110443224 110443253 -142813330 + (GTTTG)n Simple_repeat Simple_repeat 2 30 0 1965 110 0 83 chr2 110443256 110443592 -142812991 - AluSc SINE Alu -1 308 1 357 280 169 34 chr2 110443653 110443860 -142812723 - MIR SINE MIR -20 242 8 236 253 129 43 chr2 110444467 110444653 -142811930 + L1MC4 LINE L1 5804 6005 -2037 * 1880 137 30 110 chr2 110444509 110444983 -142811600 + L1MA4 LINE L1 5865 6300 0 321 89 0 0 chr2 110445054 110445099 -142811484 + (TGAA)n Simple_repeat Simple_repeat 4 48 0 1995 172 8 19 chr2 110445874 110446241 -142810342 - MLT1A1 LTR MaLR -2 363 1 2133 105 8 92 chr2 110447096 110447294 -142809289 + Tigger2 DNA MER2_type 2379 2534 -184 2037 119 0 3 chr2 110447294 110447608 -142808975 + AluSx SINE Alu 1 313 0 2133 105 8 92 chr2 110447608 110447778 -142808805 + Tigger2 DNA MER2_type 2534 2717 -1 410 169 70 0 chr2 110448087 110448158 -142808425 - Tigger2 DNA MER2_type -2243 475 400 265 231 123 0 chr2 110448152 110448217 -142808366 + Tigger2 DNA MER2_type 2636 2708 -10 * 1247 242 76 44 chr2 110448221 110448630 -142807953 + L1MC4 LINE L1 6540 6961 -1081 2394 84 0 19 chr2 110449093 110449404 -142807179 + AluSg SINE Alu 1 305 -5 1157 88 0 14 chr2 110449499 110449646 -142806937 + AluSg SINE Alu 1 145 -165 347 68 0 0 chr2 110449647 110449691 -142806892 + AluSc SINE Alu 205 248 -51 1318 142 0 52 chr2 110449691 110449723 -142806860 + AluSg/x SINE Alu 85 117 -195 183 42 0 0 chr2 110449723 110449747 -142806836 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 1318 142 0 52 chr2 110449747 110449947 -142806636 + AluSg/x SINE Alu 117 305 -7 2335 119 0 0 chr2 110449959 110450271 -142806312 + AluSq SINE Alu 1 312 -1 262 330 10 0 chr2 110451483 110451580 -142805003 + (CAGGG)n Simple_repeat Simple_repeat 3 100 0 241 281 157 27 chr2 110452568 110452753 -142803830 + L2 LINE L2 3105 3313 0 1526 219 66 82 chr2 110455076 110455698 -142800885 - LTR9 LTR ERV1 0 612 1 3615 96 56 6 chr2 110456094 110456594 -142799989 + LTR17 LTR ERV1 256 780 0 9584 110 16 38 chr2 110456594 110458101 -142798482 + HERV17 LTR ERV1 1 1474 -7152 * 12305 50 5 1 chr2 110458072 110459530 -142797053 + HERV17 LTR ERV1 2490 3953 -4673 7235 131 9 3 chr2 110459630 110461401 -142795182 + L1MA3 LINE L1 4522 6304 -1 829 259 65 18 chr2 110462419 110462697 -142793886 + MLT1E1 LTR MaLR 3 293 -361 242 308 15 54 chr2 110462838 110462968 -142793615 - L3 LINE CR1 -82 1495 1371 197 241 76 63 chr2 110463057 110463136 -142793447 - MIR3 SINE MIR -15 193 114 2061 75 0 0 chr2 110463513 110463780 -142792803 + AluY SINE Alu 30 296 -15 30 59 0 0 chr2 110464060 110464111 -142792472 + AT_rich Low_complexity Low_complexity 1 51 0 2034 102 0 54 chr2 110464135 110464448 -142792135 - AluSx SINE Alu -5 307 12 1993 123 3 7 chr2 110464467 110464776 -142791807 - AluSc SINE Alu 0 309 2 2262 101 3 0 chr2 110465312 110465619 -142790964 - AluSq SINE Alu -5 308 1 2197 138 85 5 chr2 110466049 110466449 -142790134 - MSTB1 LTR MaLR 0 432 1 5085 158 44 51 chr2 110466855 110467079 -142789504 - L1MC2 LINE L1 -1 6343 6119 2215 107 0 0 chr2 110467079 110467378 -142789205 - AluSx SINE Alu -13 299 1 5085 158 44 51 chr2 110467378 110467691 -142788892 - L1MC2 LINE L1 -225 6119 5805 1537 202 3 0 chr2 110467691 110468002 -142788581 + AluJb SINE Alu 7 312 0 5085 158 44 51 chr2 110468002 110468555 -142788028 - L1MC2 LINE L1 -539 5805 5260 * 5415 124 45 1 chr2 110468553 110469473 -142787110 + L1PA16 LINE L1 5192 6166 0 6199 242 55 34 chr2 110469481 110469817 -142786766 - L1MC2 LINE L1 -864 5282 4955 189 0 0 0 chr2 110469817 110469838 -142786745 + (TA)n Simple_repeat Simple_repeat 2 22 0 2032 115 0 3 chr2 110469838 110470124 -142786459 - AluSg SINE Alu -10 300 16 1634 191 0 3 chr2 110470126 110470424 -142786159 - AluJb SINE Alu -15 297 1 6199 242 55 34 chr2 110470424 110471330 -142785253 - L1MC2 LINE L1 -1191 4955 4070 2097 118 0 3 chr2 110471330 110471634 -142784949 - AluSx SINE Alu -9 303 1 6199 242 55 34 chr2 110471634 110472931 -142783652 - L1MC2 LINE L1 -2076 4070 2272 638 220 93 19 chr2 110472951 110473165 -142783418 - L1MC5 LINE L1 -31 7930 7701 21 57 0 0 chr2 110473183 110473218 -142783365 + AT_rich Low_complexity Low_complexity 1 35 0 27 62 0 0 chr2 110473235 110473283 -142783300 + AT_rich Low_complexity Low_complexity 1 48 0 3000 205 49 35 chr2 110473286 110473322 -142783261 - L1MB4 LINE L1 -1 6179 6145 2076 126 3 0 chr2 110473322 110473631 -142782952 - AluSx SINE Alu 0 312 3 3000 205 49 35 chr2 110473631 110474081 -142782502 - L1MB4 LINE L1 -35 6145 5675 1920 154 3 3 chr2 110474081 110474393 -142782190 - AluSx SINE Alu 0 312 1 3000 205 49 35 chr2 110474393 110474694 -142781889 - L1MB4 LINE L1 -505 5675 5380 2238 92 3 3 chr2 110474717 110475023 -142781560 - AluSp SINE Alu -7 306 1 13281 166 98 13 chr2 110475026 110477486 -142779097 + L1M1 LINE L1 74 2744 -4821 1382 85 0 0 chr2 110477486 110477663 -142778920 + AluY SINE Alu 1 177 -134 3716 123 114 36 chr2 110477663 110478762 -142777821 - MER11A LTR ERVK 0 1236 2 1006 83 0 0 chr2 110478762 110478894 -142777689 + AluY SINE Alu 171 302 -9 2368 118 3 3 chr2 110478894 110479251 -142777332 + L1M1 LINE L1 2734 3090 -4475 1261 186 4 36 chr2 110479351 110479604 -142776979 + AluJo SINE Alu 41 285 -27 219 69 0 0 chr2 110479606 110479635 -142776948 + (TTAA)n Simple_repeat Simple_repeat 3 31 0 2428 148 9 37 chr2 110479635 110480424 -142776159 + L1M1 LINE L1 3346 4109 -3456 2335 91 3 41 chr2 110480529 110480617 -142775966 - MER48 LTR ERV1 -61 326 236 2388 49 3 3 chr2 110480617 110480922 -142775661 - AluY SINE Alu -6 305 1 2335 91 3 41 chr2 110480922 110481172 -142775411 - MER48 LTR ERV1 -151 236 1 525 276 173 7 chr2 110481172 110481444 -142775139 + L1MC4a LINE L1 6291 6607 -1201 800 139 0 0 chr2 110481448 110481563 -142775020 + FLAM_C SINE Alu 3 117 -26 1118 245 49 12 chr2 110481579 110481906 -142774677 + L1MC4 LINE L1 6628 6966 -1076 1465 166 38 4 chr2 110481995 110482260 -142774323 + AluJb SINE Alu 33 306 -6 1064 269 57 49 chr2 110483096 110483443 -142773140 + L1MC4a LINE L1 5462 5545 -788 1484 150 112 0 chr2 110483443 110483710 -142772873 + AluSg SINE Alu 1 297 -13 1064 269 57 49 chr2 110483710 110483818 -142772765 + L1MC4a LINE L1 5545 5651 -682 1973 107 10 3 chr2 110484002 110484293 -142772290 + AluSg SINE Alu 1 293 -17 2429 230 43 63 chr2 110486235 110487017 -142769566 - MER21B LTR ERV1 -99 832 1 1264 230 62 27 chr2 110487157 110487536 -142769047 + LTR10C LTR ERV1 186 591 -42 293 287 35 11 chr2 110487550 110487592 -142768991 + MER5B DNA MER1_type 88 128 -50 231 103 0 0 chr2 110487592 110487631 -142768952 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 293 287 35 11 chr2 110487631 110487675 -142768908 + MER5B DNA MER1_type 128 176 -2 423 284 136 38 chr2 110487698 110487765 -142768818 - MLT1L LTR MaLR -4 611 552 2081 132 0 0 chr2 110487765 110488068 -142768515 + AluSg SINE Alu 1 303 -7 423 284 136 38 chr2 110488068 110488264 -142768319 - MLT1L LTR MaLR -63 552 322 26 39 0 20 chr2 110488575 110488611 -142767972 + AT_rich Low_complexity Low_complexity 1 37 -13 1991 125 0 3 chr2 110488611 110488763 -142767820 - AluSx SINE Alu -24 288 136 2298 94 3 0 chr2 110488763 110489070 -142767513 - AluSp SINE Alu -5 308 1 1991 125 0 3 chr2 110489070 110489206 -142767377 - AluSx SINE Alu -176 136 1 26 39 0 20 chr2 110489206 110489220 -142767363 + AT_rich Low_complexity Low_complexity 37 50 0 728 299 85 30 chr2 110489422 110489857 -142766726 - L1MC4a LINE L1 -1948 5860 5402 2445 64 0 0 chr2 110490027 110490338 -142766245 - AluY SINE Alu 0 311 1 820 155 6 6 chr2 110490340 110490501 -142766082 - FRAM SINE Alu -8 168 8 229 238 24 60 chr2 110490979 110491063 -142765520 + L2 LINE L2 3192 3272 0 183 301 227 6 chr2 110491175 110491338 -142765245 + MIR SINE MIR 25 223 -39 2087 98 0 3 chr2 110491339 110491666 -142764917 + AluSg1 SINE Alu 1 326 0 896 196 52 132 chr2 110491771 110491952 -142764631 - LTR48B LTR ERV1 -13 631 437 2039 125 0 3 chr2 110491952 110492248 -142764335 + AluSx SINE Alu 1 295 -17 896 196 52 132 chr2 110492248 110492489 -142764094 - LTR48B LTR ERV1 -207 437 243 587 223 9 0 chr2 110492517 110492629 -142763954 - FLAM_C SINE Alu -25 118 6 291 213 67 0 chr2 110492733 110492808 -142763775 - MER34 LTR ERV1 -439 103 24 800 164 62 34 chr2 110492889 110493066 -142763517 + MER53 DNA DNA 6 187 -2 275 376 8 8 chr2 110493265 110493382 -142763201 + MER5A DNA MER1_type 73 189 0 2071 85 14 10 chr2 110493815 110494108 -142762475 - AluSg SINE Alu -14 296 3 2096 104 7 3 chr2 110494170 110494467 -142762116 - AluSx SINE Alu -11 301 4 1233 263 175 25 chr2 110494494 110495084 -142761499 - L1ME3A LINE L1 -9 6161 5484 213 318 195 7 chr2 110495277 110495431 -142761152 - MIR SINE MIR -1 261 79 31 0 0 0 chr2 110495468 110495499 -142761084 + AT_rich Low_complexity Low_complexity 1 31 0 232 277 78 85 chr2 110495682 110495823 -142760760 - MER5A DNA MER1_type 0 189 50 180 111 0 0 chr2 110496088 110496115 -142760468 + (CATA)n Simple_repeat Simple_repeat 2 28 0 1726 205 38 54 chr2 110496116 110496167 -142760416 - MER82 DNA MER2_type -1 652 602 2067 106 0 3 chr2 110496167 110496460 -142760123 - AluSg1 SINE Alu -17 292 1 1726 205 38 54 chr2 110496460 110496833 -142759750 - MER82 DNA MER2_type -51 602 235 225 184 0 0 chr2 110496832 110496870 -142759713 - MER82 DNA MER2_type -595 58 21 * 266 300 93 20 chr2 110497894 110498044 -142758539 - L2 LINE L2 0 3313 3153 373 169 133 0 chr2 110500279 110500362 -142756221 + HAL1b LINE L1 514 607 -741 1164 137 5 29 chr2 110500370 110500575 -142756008 + AluJo SINE Alu 96 295 -17 850 246 102 32 chr2 110500580 110500922 -142755661 + HAL1b LINE L1 615 980 -368 283 274 126 14 chr2 110601704 110601927 -142654656 + LTR16C LTR ERVL 152 399 -92 189 0 0 0 chr2 110603019 110603040 -142653543 + (TG)n Simple_repeat Simple_repeat 1 21 0 583 98 0 88 chr2 110603054 110603248 -142653335 + (CAGAGA)n Simple_repeat Simple_repeat 4 180 0 266 103 0 0 chr2 110603833 110603872 -142652711 + (A)n Simple_repeat Simple_repeat 1 39 0 367 286 77 60 chr2 110604403 110604767 -142651816 - L1MC/D LINE L1 -2148 5660 5291 1860 173 60 69 chr2 110605587 110606184 -142650399 + pTR5 LTR ERV1 748 1339 -1099 3801 160 56 81 chr2 110606233 110607076 -142649507 + LTR12 LTR ERV1 5 826 0 342 294 48 24 chr2 110607322 110607448 -142649135 + L1M4 LINE L1 4267 4395 -1751 275 64 0 21 chr2 110607937 110607984 -142648599 + (TATG)n Simple_repeat Simple_repeat 3 48 0 996 197 34 34 chr2 110607993 110608227 -142648356 - AluJo SINE Alu -39 273 40 1861 168 105 5 chr2 110608423 110608823 -142647760 - L1MA6 LINE L1 -9 6291 5852 1996 100 3 38 chr2 110609176 110609495 -142647088 + AluY SINE Alu 1 308 -3 258 214 29 14 chr2 110609644 110609714 -142646869 - Charlie7 DNA MER1_type -37 2575 2505 334 255 261 21 chr2 110609772 110609960 -142646623 - Charlie7 DNA MER1_type -1890 722 490 1000 63 0 0 chr2 110609961 110610088 -142646495 + AluY SINE Alu 169 295 -16 377 271 8 8 chr2 110610119 110610237 -142646346 - Charlie7 DNA MER1_type -2136 476 359 1222 283 97 12 chr2 110610599 110611159 -142645424 - L2 LINE L2 -5 3308 2702 558 185 28 9 chr2 110611165 110611273 -142645310 - FRAM SINE Alu -72 104 1 824 229 188 0 chr2 110611875 110612115 -142644468 + MSTD LTR MaLR 112 396 0 215 275 0 0 chr2 110612171 110612211 -142644372 + MER91B DNA MER1_type 24 63 -127 224 185 0 15 chr2 110612330 110612369 -142644214 + (CCTAT)n Simple_repeat Simple_repeat 3 42 -24 2373 178 29 12 chr2 110612369 110612786 -142643797 - MSTB LTR MaLR -2 424 1 224 185 0 15 chr2 110612786 110612811 -142643772 + (CCTAT)n Simple_repeat Simple_repeat 42 66 0 1975 134 10 0 chr2 110612837 110613144 -142643439 + AluSx SINE Alu 1 310 -2 375 157 0 211 chr2 110613165 110613312 -142643271 - MLT2F LTR ERVL -10 618 503 805 332 97 30 chr2 110613405 110613878 -142642705 - MLT2F LTR ERVL -153 510 6 815 188 62 6 chr2 110613902 110614062 -142642521 - MER63 DNA MER1_type 0 1061 893 428 336 102 31 chr2 110614146 110614566 -142642017 - L1ME LINE L1 -5609 461 12 264 275 11 11 chr2 110614701 110614792 -142641791 - HAL1 LINE L1 -1043 1464 1374 1528 201 110 11 chr2 110614831 110615205 -142641378 - L1MD2 LINE L1 -19 6340 5930 1073 142 9 44 chr2 110615184 110615409 -142641174 - L1MA4 LINE L1 0 6300 6084 * 1100 171 20 12 chr2 110615203 110615449 -142641134 - L1MA4 LINE L1 -11 6289 6042 47 19 0 0 chr2 110615507 110615561 -142641022 + AT_rich Low_complexity Low_complexity 1 54 0 296 291 34 46 chr2 110616457 110616583 -142640000 - L1MEd LINE L1 -4979 1140 1017 2280 129 31 14 chr2 110616583 110616939 -142639644 - THE1B LTR MaLR -2 362 1 296 291 34 46 chr2 110616939 110617049 -142639534 - L1MEd LINE L1 -5102 1017 907 22 35 0 0 chr2 110617069 110617098 -142639485 + AT_rich Low_complexity Low_complexity 1 29 0 380 281 86 23 chr2 110617796 110617924 -142638659 + MIR SINE MIR 83 218 -44 949 272 89 22 chr2 110618054 110618414 -142638169 - MLT1I LTR MaLR 0 409 26 236 242 20 7 chr2 110619557 110619706 -142636877 + (TATG)n Simple_repeat Simple_repeat 1 151 0 182 167 0 24 chr2 110619776 110619818 -142636765 + (TATG)n Simple_repeat Simple_repeat 3 43 0 279 294 29 0 chr2 110619922 110620058 -142636525 - L1M4 LINE L1 -1432 4714 4575 318 220 172 43 chr2 110620062 110620124 -142636459 - L1M4 LINE L1 -2606 3540 3487 2272 103 3 7 chr2 110620124 110620434 -142636149 - AluY SINE Alu -2 309 1 318 220 172 43 chr2 110620434 110620557 -142636026 - L1M4 LINE L1 -2659 3487 3331 * 3514 216 21 43 chr2 110620553 110622217 -142634366 - L1MB8 LINE L1 0 6989 5362 1985 197 62 2 chr2 110622218 110622418 -142634165 - MSTB LTR MaLR -1 425 238 194 0 39 0 chr2 110622418 110622444 -142634139 + (GA)n Simple_repeat Simple_repeat 1 27 0 1985 197 62 2 chr2 110622444 110622644 -142633939 - MSTB LTR MaLR -188 238 1 8058 200 28 3 chr2 110622649 110624254 -142632329 - MSTB-int LTR MaLR -6 1645 1 2258 165 57 7 chr2 110624255 110624660 -142631923 - MSTB LTR MaLR -1 425 1 316 257 48 19 chr2 110624663 110624768 -142631815 - L1MB8 LINE L1 -1597 5360 5253 1056 255 48 50 chr2 110624768 110625188 -142631395 - L1MB8 LINE L1 -6435 424 6 720 316 18 0 chr2 110625275 110625500 -142631083 - L2 LINE L2 -854 2460 2232 201 313 0 75 chr2 110626105 110626143 -142630440 + L2 LINE L2 3239 3270 -43 1855 175 143 8 chr2 110626143 110626520 -142630063 - MSTA LTR MaLR 0 428 1 201 313 0 75 chr2 110626520 110626561 -142630022 + L2 LINE L2 3269 3312 -1 21 0 0 0 chr2 110627011 110627032 -142629551 + AT_rich Low_complexity Low_complexity 1 21 0 1130 184 5 9 chr2 110627810 110628022 -142628561 + MER2 DNA MER2_type 1 211 -134 505 213 71 0 chr2 110628740 110628881 -142627702 - MER58B DNA MER1_type 0 341 191 914 203 18 14 chr2 110629907 110630124 -142626459 - MLT1A1 LTR MaLR 0 365 148 1242 169 84 55 chr2 110630148 110630421 -142626162 - AluJo SINE Alu -23 289 9 876 111 26 7 chr2 110630426 110630579 -142626004 - MLT1A1 LTR MaLR -208 157 2 341 299 98 107 chr2 110630596 110630695 -142625888 - L2 LINE L2 -4 3268 3170 306 0 0 0 chr2 110630695 110630729 -142625854 + (CA)n Simple_repeat Simple_repeat 2 35 0 341 299 98 107 chr2 110630729 110631190 -142625393 - L2 LINE L2 -102 3170 2717 2305 213 63 4 chr2 110631190 110631701 -142624882 + MER87 LTR ERV1 1 541 0 341 299 98 107 chr2 110631701 110631865 -142624718 - L2 LINE L2 -555 2717 2553 351 340 102 10 chr2 110631868 110632065 -142624518 - L2 LINE L2 -973 2341 2127 379 291 7 0 chr2 110632073 110632214 -142624369 - L1M4c LINE L1 -5032 1927 1786 3276 267 37 34 chr2 110632253 110633327 -142623256 - L1M4c LINE L1 -5771 1088 11 271 214 170 44 chr2 110633469 110633628 -142622955 - L2 LINE L2 -1352 1962 1784 23 54 0 0 chr2 110633629 110633666 -142622917 + AT_rich Low_complexity Low_complexity 1 37 0 477 269 58 50 chr2 110634075 110634369 -142622214 - L1MC/D LINE L1 -635 5527 5425 1880 171 3 3 chr2 110634369 110634679 -142621904 - AluJb SINE Alu -2 310 1 477 269 58 50 chr2 110634679 110635005 -142621578 - L1MC/D LINE L1 -737 5425 5103 550 280 117 67 chr2 110635400 110635803 -142620780 - L2 LINE L2 -1758 1556 1134 4791 188 57 18 chr2 110637052 110638890 -142617693 - L1MC2 LINE L1 -6 6618 4708 3072 159 44 35 chr2 110638931 110639095 -142617488 + L1MA7 LINE L1 5616 5777 -514 251 28 28 0 chr2 110639095 110639131 -142617452 + (CA)n Simple_repeat Simple_repeat 2 38 0 3072 159 44 35 chr2 110639131 110639625 -142616958 + L1MA7 LINE L1 5777 6280 -11 1050 179 113 68 chr2 110639677 110640101 -142616482 - LTR7 LTR ERV1 -7 443 1 * 2171 209 48 33 chr2 110640101 110640618 -142615965 - MER74A LTR ERVL -14 544 20 3412 227 28 9 chr2 110640632 110641562 -142615021 - L1MC2 LINE L1 -1699 4727 3780 23 33 0 0 chr2 110641577 110641607 -142614976 + AT_rich Low_complexity Low_complexity 1 30 0 1124 146 21 17 chr2 110641614 110641847 -142614736 - L1M4 LINE L1 -2116 4030 3797 3525 240 54 15 chr2 110641876 110643351 -142613232 - L1MC2 LINE L1 -2685 3741 2207 2221 96 3 0 chr2 110643362 110643685 -142612898 + AluSc SINE Alu 1 324 0 21 36 0 0 chr2 110643741 110643769 -142612814 + AT_rich Low_complexity Low_complexity 1 28 0 456 174 0 0 chr2 110643883 110643975 -142612608 - L1MA4A LINE L1 -24 6279 6188 390 347 61 6 chr2 110644163 110644489 -142612094 - L1ME4a LINE L1 -266 5855 5512 21 0 0 0 chr2 110644675 110644696 -142611887 + AT_rich Low_complexity Low_complexity 1 21 0 4268 232 41 62 chr2 110646940 110648188 -142608395 - L1MC4a LINE L1 -1 7807 6598 555 54 33 0 chr2 110648188 110648280 -142608303 + (TCTA)n Simple_repeat Simple_repeat 2 96 0 4268 232 41 62 chr2 110648280 110648640 -142607943 - L1MC4a LINE L1 -1210 6598 6232 2115 116 3 10 chr2 110648640 110648934 -142607649 - AluSg SINE Alu -1 309 18 3202 98 78 0 chr2 110649556 110650017 -142606566 + LOR1a LTR ERV1 1 497 0 1287 180 19 90 chr2 110650276 110650418 -142606165 + MER2 DNA MER2_type 1 152 -193 2492 76 0 22 chr2 110650418 110650732 -142605851 - AluY SINE Alu -4 307 1 1287 180 19 90 chr2 110650732 110650955 -142605628 + MER2 DNA MER2_type 152 340 -5 1111 228 201 20 chr2 110652687 110653144 -142603439 - MLT1H LTR MaLR -9 540 1 1235 151 9 9 chr2 110653498 110653723 -142602860 + LOR1a LTR ERV1 1 225 -272 1457 175 15 4 chr2 110653813 110654076 -142602507 + LOR1a LTR ERV1 232 497 0 637 93 19 0 chr2 110654336 110654443 -142602140 + (TCTA)n Simple_repeat Simple_repeat 4 112 0 449 325 18 18 chr2 110654477 110654640 -142601943 + MIR SINE MIR 28 190 -72 293 250 0 33 chr2 110655838 110655930 -142600653 + CT-rich Low_complexity Low_complexity 2 90 0 2635 150 47 2 chr2 110656080 110656527 -142600056 + MLT1C LTR MaLR 1 467 0 465 279 36 0 chr2 110656822 110656933 -142599650 + L2 LINE L2 3192 3306 -7 795 250 11 0 chr2 110657488 110657664 -142598919 + MER45A DNA AcHobo 1 178 0 2339 104 0 0 chr2 110658356 110658653 -142597930 + AluSg SINE Alu 1 297 -13 341 346 45 20 chr2 110659051 110659253 -142597330 + MIR3 SINE MIR 2 208 0 313 281 191 34 chr2 110660483 110660661 -142595922 + MIR SINE MIR 30 235 -27 21 71 0 0 chr2 110660746 110660788 -142595795 + AT_rich Low_complexity Low_complexity 1 42 0 818 235 33 5 chr2 110661756 110661969 -142594614 + MER20 DNA MER1_type 1 219 0 199 333 125 10 chr2 110662356 110662452 -142594131 - L2 LINE L2 -56 3216 3110 377 270 72 18 chr2 110664188 110664299 -142592284 + L2 LINE L2 3156 3272 0 2369 68 0 10 chr2 110664481 110664791 -142591792 - AluY SINE Alu -4 307 1 28 48 0 0 chr2 110665165 110665207 -142591376 + AT_rich Low_complexity Low_complexity 1 42 0 612 261 161 31 chr2 110665648 110666317 -142590266 - L2 LINE L2 -99 3214 2448 204 128 64 0 chr2 110666318 110666365 -142590218 + (TA)n Simple_repeat Simple_repeat 1 50 0 1712 171 15 60 chr2 110666385 110666782 -142589801 - MLT1B LTR MaLR -11 379 1 244 194 97 0 chr2 110666957 110667029 -142589554 + GA-rich Low_complexity Low_complexity 2 80 0 218 264 0 11 chr2 110667578 110667669 -142588914 + (TG)n Simple_repeat Simple_repeat 1 90 0 1853 142 40 53 chr2 110669378 110669758 -142586825 + THE1C LTR MaLR 1 375 0 209 250 164 60 chr2 110670118 110670234 -142586349 + MIR3 SINE MIR 15 142 -66 267 304 80 27 chr2 110670511 110670623 -142585960 - L2 LINE L2 0 3272 3155 14673 118 42 3 chr2 110670805 110673130 -142583453 - Tigger1 DNA MER2_type 0 2418 4 273 356 80 21 chr2 110673252 110673440 -142583143 + MIR SINE MIR 15 213 -49 575 249 74 23 chr2 110675233 110675490 -142581093 + L1MEd LINE L1 1044 1313 -4892 315 333 91 0 chr2 110675561 110675759 -142580824 + HAL1 LINE L1 1428 1643 -864 1608 167 30 0 chr2 110675790 110675903 -142580680 + AluJo SINE Alu 6 114 -198 387 0 0 0 chr2 110675903 110675946 -142580637 + (CA)n Simple_repeat Simple_repeat 2 44 0 1608 167 30 0 chr2 110675946 110676101 -142580482 + AluJo SINE Alu 114 282 -30 22 35 0 0 chr2 110676111 110676140 -142580443 + AT_rich Low_complexity Low_complexity 1 29 0 1171 287 145 32 chr2 110676527 110677540 -142579043 + L1MEd LINE L1 2074 3155 -3060 552 299 66 57 chr2 110677559 110678048 -142578535 - L1MEd LINE L1 -4908 1211 713 276 30 0 0 chr2 110678048 110678081 -142578502 + (TG)n Simple_repeat Simple_repeat 2 34 0 552 299 66 57 chr2 110678081 110678276 -142578307 - L1MEd LINE L1 -5406 713 521 300 210 48 0 chr2 110678676 110678738 -142577845 + L2 LINE L2 2288 2352 -962 297 0 0 0 chr2 110678752 110678785 -142577798 + (CA)n Simple_repeat Simple_repeat 1 33 0 * 351 0 0 0 chr2 110678784 110678823 -142577760 + (TC)n Simple_repeat Simple_repeat 1 39 0 1974 112 0 56 chr2 110679212 110679535 -142577048 - AluSg SINE Alu 0 310 1 262 346 70 23 chr2 110679679 110679936 -142576647 + L2 LINE L2 2938 3206 -107 562 73 61 0 chr2 110682833 110682915 -142573668 + L1PA11 LINE L1 6086 6172 -2 556 303 89 8 chr2 110683148 110683214 -142573369 - L1ME3A LINE L1 -200 5970 5911 225 0 0 0 chr2 110683214 110683239 -142573344 + (TTA)n Simple_repeat Simple_repeat 2 26 0 2022 115 28 3 chr2 110683242 110683528 -142573055 - AluSg SINE Alu -17 293 1 556 303 89 8 chr2 110683528 110683817 -142572766 - L1ME3A LINE L1 -260 5910 5582 1728 175 41 25 chr2 110683827 110684193 -142572390 + THE1C LTR MaLR 1 372 -3 8985 118 68 8 chr2 110684198 110685687 -142570896 + THE1C-int LTR MaLR 3 1580 0 1837 152 52 33 chr2 110685687 110686055 -142570528 + THE1C LTR MaLR 1 375 0 365 324 93 45 chr2 110686075 110686387 -142570196 - L1 LINE L1 -2355 3791 3465 1613 173 19 27 chr2 110686442 110686813 -142569770 - L1MB7 LINE L1 -2 6182 5815 2137 189 50 78 chr2 110686831 110687057 -142569526 - L1MB7 LINE L1 -454 5726 5495 203 86 0 29 chr2 110687057 110687092 -142569491 + (TTA)n Simple_repeat Simple_repeat 3 36 0 2137 189 50 78 chr2 110687092 110687412 -142569171 - L1MB7 LINE L1 -685 5495 5168 2100 155 0 0 chr2 110687412 110687722 -142568861 - AluSx SINE Alu -2 310 1 2137 189 50 78 chr2 110687722 110688261 -142568322 - L1MB7 LINE L1 -1012 5168 4664 1699 172 0 72 chr2 110688274 110688594 -142567989 - AluJo SINE Alu -13 299 3 231 276 164 35 chr2 110688729 110688845 -142567738 + MIR SINE MIR 39 169 -93 910 186 70 0 chr2 110689074 110689230 -142567353 - FAM SINE Alu -8 41 1 30 27 0 0 chr2 110690469 110690506 -142566077 + AT_rich Low_complexity Low_complexity 1 37 0 237 261 0 11 chr2 110690834 110690857 -142565726 - L1MA4A LINE L1 -24 6279 6257 542 221 0 95 chr2 110690857 110690975 -142565608 - L1PB4 LINE L1 -29 6127 5999 2381 147 52 17 chr2 110690975 110691383 -142565200 + MSTA LTR MaLR 3 424 -4 8508 168 39 14 chr2 110691387 110692999 -142563584 + MSTA-int LTR MaLR 1 1651 0 2146 140 80 18 chr2 110693001 110693402 -142563181 + MSTA LTR MaLR 3 428 0 542 221 0 95 chr2 110693402 110693433 -142563150 - L1PB4 LINE L1 -161 5995 5985 330 303 113 14 chr2 110693453 110693595 -142562988 - L1MD2 LINE L1 -515 5844 5689 411 263 145 27 chr2 110693726 110694031 -142562552 - L1MD2 LINE L1 -699 5465 5118 228 289 76 51 chr2 110694049 110694364 -142562219 - L1MD2 LINE L1 -1077 5069 4747 266 253 13 0 chr2 110694425 110694504 -142562079 + L1ME3A LINE L1 5903 5982 -188 6221 97 9 4 chr2 110694506 110696012 -142560571 - L1PA10 LINE L1 -2 6166 4649 522 0 55 33 chr2 110696012 110696103 -142560480 + (TTTTA)n Simple_repeat Simple_repeat 4 96 0 359 62 0 0 chr2 110696104 110696152 -142560431 - Alu SINE Alu -17 283 236 2330 116 8 25 chr2 110696152 110696174 -142560409 - L1PA10 LINE L1 -1489 4657 4636 2416 90 0 3 chr2 110696174 110696486 -142560097 - AluY SINE Alu 0 311 1 2330 116 8 25 chr2 110696486 110696861 -142559722 - L1PA10 LINE L1 -1510 4636 4267 1036 92 0 0 chr2 110696861 110697013 -142559570 + L1P LINE L1 3876 4027 -2119 * 12355 136 14 5 chr2 110697012 110699162 -142557421 - L1PA10 LINE L1 -1881 4265 2097 2303 120 0 0 chr2 110699375 110699684 -142556899 + AluSg SINE Alu 1 309 -1 289 195 52 13 chr2 110699684 110699761 -142556822 + L1MC4a LINE L1 7273 7352 -456 412 330 95 39 chr2 110699765 110700050 -142556533 + L2 LINE L2 2632 2932 -382 225 291 192 13 chr2 110700395 110700546 -142556037 - MLT1L LTR MaLR -224 391 214 453 259 55 40 chr2 110700749 110700950 -142555633 - MER3 DNA MER1_type -1 208 5 1642 37 5 28 chr2 110701648 110701864 -142554719 - L1PA4 LINE L1 0 6155 5945 2522 199 45 27 chr2 110701980 110702617 -142553966 - L1MD2 LINE L1 -274 6479 5831 488 126 20 13 chr2 110702617 110702715 -142553868 + MLT1A1 LTR MaLR 1 90 -338 637 248 24 65 chr2 110702889 110703135 -142553448 + MLT1A1 LTR MaLR 130 365 0 3064 250 96 15 chr2 110703135 110704405 -142552178 - L1MD2 LINE L1 -769 5771 4472 1522 262 36 22 chr2 110704399 110705085 -142551498 - L1MD2 LINE L1 -2470 4070 3375 * 1319 216 80 65 chr2 110705098 110705785 -142550798 - L1MD2 LINE L1 -3439 3101 2384 389 175 92 8 chr2 110705794 110705914 -142550669 - L1MD2 LINE L1 -4219 2321 2192 4810 221 58 32 chr2 110706466 110706599 -142549984 - L1MD2 LINE L1 -4358 2182 2054 2267 90 23 0 chr2 110706599 110706898 -142549685 - AluY SINE Alu -5 306 1 4810 221 58 32 chr2 110706898 110707325 -142549258 - L1MD2 LINE L1 -4486 2054 1640 2228 140 22 6 chr2 110707325 110707682 -142548901 - THE1B LTR MaLR 0 364 2 4810 221 58 32 chr2 110707682 110708606 -142547977 - L1MD2 LINE L1 -4900 1640 657 227 271 60 40 chr2 110708930 110709081 -142547502 + L2 LINE L2 3104 3257 -56 1220 267 78 27 chr2 110709147 110709676 -142546907 - L2 LINE L2 -1 3312 2754 776 220 92 32 chr2 110709676 110709926 -142546657 - LTR40b LTR ERVL 0 462 198 1448 277 80 26 chr2 110710148 110710471 -142546112 - L2 LINE L2 -572 2742 2381 1811 122 91 55 chr2 110710471 110710708 -142545875 - THE1C LTR MaLR 0 375 119 2094 124 3 40 chr2 110710708 110711031 -142545552 + AluSx SINE Alu 2 312 0 1811 122 91 55 chr2 110711031 110711155 -142545428 - THE1C LTR MaLR -256 119 1 1448 277 80 26 chr2 110711155 110711333 -142545250 - L2 LINE L2 -933 2381 2214 592 198 5 125 chr2 110711334 110711502 -142545081 - LTR16A1 LTR ERVL 0 457 313 2204 105 0 0 chr2 110711502 110711787 -142544796 + AluSq SINE Alu 1 285 -28 592 198 5 125 chr2 110711787 110711810 -142544773 - LTR16A1 LTR ERVL -144 313 289 420 200 75 8 chr2 110711818 110711938 -142544645 - LTR16A1 LTR ERVL -135 322 195 312 325 20 26 chr2 110711994 110712145 -142544438 - L2 LINE L2 -1093 2221 2072 1052 279 20 62 chr2 110712171 110712669 -142543914 - HsTC2c DNA Tc2 -64 665 189 228 67 0 0 chr2 110712980 110713010 -142543573 + (TTAAA)n Simple_repeat Simple_repeat 3 32 0 5000 173 18 14 chr2 110713137 110714302 -142542281 - L1MA7 LINE L1 0 6291 5124 492 266 136 43 chr2 110714312 110714871 -142541712 + HAL1 LINE L1 926 1536 -971 465 241 52 104 chr2 110715837 110716086 -142540497 + MIR SINE MIR 25 260 -2 639 260 48 37 chr2 110717001 110717270 -142539313 - MER87 LTR ERV1 -101 440 169 1635 219 109 78 chr2 110719209 110720268 -142536315 - L1MC5 LINE L1 -272 7689 6608 213 94 0 0 chr2 110720268 110720300 -142536283 + (CA)n Simple_repeat Simple_repeat 1 32 0 1635 219 109 78 chr2 110720300 110720352 -142536231 - L1MC5 LINE L1 -1353 6608 6559 3460 181 127 30 chr2 110720649 110721553 -142535030 + L1MC3 LINE L1 6764 7755 -30 28 48 0 0 chr2 110721581 110721623 -142534960 + AT_rich Low_complexity Low_complexity 1 42 0 183 42 0 0 chr2 110722118 110722142 -142534441 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 334 295 39 26 chr2 110722398 110722554 -142534029 - LTR33 LTR ERVL -339 182 25 416 271 133 9 chr2 110722690 110722900 -142533683 + L1MC4 LINE L1 6766 7001 -1041 46 45 0 0 chr2 110722927 110722994 -142533589 + AT_rich Low_complexity Low_complexity 1 67 0 684 226 124 75 chr2 110723611 110724054 -142532529 - MLT1C LTR MaLR -2 465 1 737 184 0 37 chr2 110724159 110724322 -142532261 + L1MB1 LINE L1 6011 6167 -1 1453 105 48 20 chr2 110725172 110725420 -142531163 + L1PB2 LINE L1 5897 6151 0 7659 126 49 3 chr2 110725721 110726965 -142529618 - HSMAR2 DNA Mariner -1 1301 1 2235 138 69 12 chr2 110728273 110728694 -142527889 - MER65A LTR ERV1 0 445 1 342 45 0 0 chr2 110731449 110731493 -142525090 + (TG)n Simple_repeat Simple_repeat 2 45 0 1971 198 71 97 chr2 110732198 110732944 -142523639 - LTR8A LTR ERV1 0 727 1 628 235 134 0 chr2 110733352 110733539 -142523044 - MER20 DNA MER1_type -7 212 1 212 301 199 6 chr2 110733565 110733741 -142522842 - L3 LINE CR1 -670 907 698 379 264 172 50 chr2 110733786 110733904 -142522679 - LTR33 LTR ERVL 0 521 419 2115 164 55 14 chr2 110733904 110734344 -142522239 + L1MB2 LINE L1 5712 6169 -2 379 264 172 50 chr2 110734344 110734649 -142521934 - LTR33 LTR ERVL -102 419 46 1592 165 65 30 chr2 110735337 110735707 -142520876 - MLT1B LTR MaLR -7 383 1 230 216 21 93 chr2 110735809 110735906 -142520677 + MIR SINE MIR 162 251 -11 289 227 0 0 chr2 110736031 110736106 -142520477 - L1MA8 LINE L1 0 6291 6217 * 727 160 33 16 chr2 110736088 110736270 -142520313 + L1 LINE L1 4537 4718 -1428 1467 199 19 19 chr2 110736785 110737097 -142519486 + MLT1A1 LTR MaLR 1 312 -53 1796 181 8 3 chr2 110737172 110737532 -142519051 + L1 LINE L1 4721 5082 -1064 917 158 49 5 chr2 110737532 110737716 -142518867 - L1MC2 LINE L1 -14 6330 6139 2029 204 26 7 chr2 110737716 110738132 -142518451 - MLT2B2 LTR ERVL -1 514 91 8917 162 29 96 chr2 110738138 110740581 -142516002 - L1P LINE L1 -1072 5074 2797 2573 177 29 35 chr2 110740579 110740905 -142515678 - L1MC2 LINE L1 -748 5398 5072 * 261 0 0 0 chr2 110740905 110740934 -142515649 + (TG)n Simple_repeat Simple_repeat 2 30 0 2573 177 29 35 chr2 110740934 110741331 -142515252 - L1MC2 LINE L1 -1074 5072 4712 287 319 22 67 chr2 110742568 110742703 -142513880 + MER91B DNA MER1_type 2 130 -60 2891 126 2 2 chr2 110742722 110743168 -142513415 - Tigger2 DNA MER2_type 0 2718 2273 327 200 15 0 chr2 110743173 110743238 -142513345 - Tigger2 DNA MER2_type -2652 66 1 382 181 0 14 chr2 110743238 110743310 -142513273 + MER91B DNA MER1_type 90 160 -30 280 315 224 25 chr2 110743336 110743943 -142512640 - L2 LINE L2 -912 2402 1629 1846 227 58 22 chr2 110743943 110744440 -142512143 + LTR40a LTR ERVL 1 515 -4 280 315 224 25 chr2 110744440 110744550 -142512033 - L2 LINE L2 -1685 1629 1542 457 203 7 21 chr2 110744840 110745125 -142511458 + (TG)n Simple_repeat Simple_repeat 1 280 0 21 36 0 0 chr2 110745423 110745451 -142511132 + AT_rich Low_complexity Low_complexity 1 28 0 28 61 0 0 chr2 110745487 110745536 -142511047 + AT_rich Low_complexity Low_complexity 1 49 0 408 178 39 124 chr2 110746145 110746274 -142510309 - Charlie4a DNA MER1_type 0 508 391 436 284 67 26 chr2 110746480 110746748 -142509835 + LTR16A1 LTR ERVL 179 457 0 541 193 43 72 chr2 110746793 110747015 -142509568 - Charlie4a DNA MER1_type -1621 340 77 1651 204 142 20 chr2 110747015 110747465 -142509118 + MLT1D LTR MaLR 1 505 0 541 193 43 72 chr2 110747465 110747539 -142509044 - Charlie4a DNA MER1_type -1884 77 2 202 245 0 20 chr2 110747563 110747612 -142508971 + MIR3 SINE MIR 116 163 -45 766 261 102 30 chr2 110750126 110750490 -142506093 + MLT1B LTR MaLR 1 390 0 448 266 107 71 chr2 110750682 110751076 -142505507 - MLT1J LTR MaLR 0 511 104 1961 120 52 12 chr2 110751397 110751721 -142504862 + MER1B DNA MER1_type 1 337 -2 1048 85 0 0 chr2 110751743 110751909 -142504674 + AluSp/q SINE Alu 169 334 0 1901 153 0 0 chr2 110751918 110752205 -142504378 + AluSx SINE Alu 1 287 -25 229 128 0 0 chr2 110804011 110804050 -142452533 - MER114 LTR ERV -293 355 317 275 413 67 18 chr2 110804765 110804988 -142451595 + L2 LINE L2 2827 3060 -212 916 118 8 0 chr2 110805301 110805428 -142451155 - AluY SINE Alu -183 128 1 287 148 136 25 chr2 110806438 110806519 -142450064 - MIR SINE MIR -73 189 100 21 0 0 0 chr2 110806986 110807007 -142449576 + AT_rich Low_complexity Low_complexity 1 21 0 305 194 15 0 chr2 110807995 110808062 -142448521 + L1MC4 LINE L1 7700 7767 -275 6451 109 14 26 chr2 110809246 110810454 -142446129 - L1P3 LINE L1 -4459 2002 806 229 340 133 0 chr2 110810968 110811118 -142445465 + MIR SINE MIR 74 243 -19 816 316 57 38 chr2 110811836 110812289 -142444294 + LTR33 LTR ERVL 10 471 -50 2180 97 7 0 chr2 110812575 110812864 -142443719 + AluSp SINE Alu 4 294 -19 366 61 0 0 chr2 110812872 110812921 -142443662 + (CA)n Simple_repeat Simple_repeat 2 50 0 277 286 14 0 chr2 110813113 110813183 -142443400 + MER63 DNA MER1_type 988 1058 -2 668 281 75 34 chr2 110813185 110813889 -142442694 - L1ME LINE L1 -516 5654 4733 1446 269 54 42 chr2 110813949 110814562 -142442021 - L1ME1 LINE L1 -7 6159 5540 357 306 16 46 chr2 110814664 110814968 -142441615 - L1ME1 LINE L1 -3206 2940 2646 25 0 0 0 chr2 110815249 110815274 -142441309 + AT_rich Low_complexity Low_complexity 1 25 0 377 315 51 19 chr2 110815292 110815549 -142441034 - L1ME LINE L1 -378 5743 5479 946 95 0 0 chr2 110815876 110816002 -142440581 + L1PA7 LINE L1 6014 6139 -15 23 0 0 0 chr2 110816064 110816087 -142440496 + AT_rich Low_complexity Low_complexity 1 23 0 769 281 157 17 chr2 110816111 110816519 -142440064 + L1ME3A LINE L1 5483 5948 -214 276 298 1 37 chr2 110816619 110816744 -142439839 + L1ME3A LINE L1 5968 6087 -75 458 357 63 12 chr2 110816880 110817132 -142439451 + L3 LINE CR1 1312 1576 -1 3811 112 3 17 chr2 110817640 110818236 -142438347 - L1P LINE L1 -2265 3881 3294 190 94 0 0 chr2 110818238 110818270 -142438313 + (TTTG)n Simple_repeat Simple_repeat 1 128 0 2236 75 4 0 chr2 110818270 110818549 -142438034 - AluY SINE Alu -31 280 1 402 379 65 41 chr2 110819264 110819945 -142436638 - L2 LINE L2 -4 3268 2580 333 281 94 42 chr2 110820078 110820270 -142436313 - L1ME4a LINE L1 -264 5857 5656 229 256 44 0 chr2 110820349 110820439 -142436144 - L1ME4a LINE L1 -489 5632 5539 234 91 0 0 chr2 110820753 110820786 -142435797 + (TC)n Simple_repeat Simple_repeat 1 33 0 1835 190 123 2 chr2 110821275 110821723 -142434860 - MLT1D LTR MaLR -3 502 1 216 0 0 0 chr2 110822560 110822584 -142433999 + (TC)n Simple_repeat Simple_repeat 1 24 0 333 303 0 0 chr2 110822887 110822976 -142433607 - L1MC4 LINE L1 -1339 6703 6615 297 197 0 0 chr2 110822977 110823038 -142433545 + (TA)n Simple_repeat Simple_repeat 1 61 0 4100 212 63 20 chr2 110824205 110824314 -142432269 - L1MB5 LINE L1 -16 6158 6055 1784 141 42 65 chr2 110824314 110824698 -142431885 + THE1C LTR MaLR 1 375 0 4100 212 63 20 chr2 110824698 110826292 -142430291 - L1MB5 LINE L1 -119 6055 4379 26 0 0 0 chr2 110826493 110826519 -142430064 + AT_rich Low_complexity Low_complexity 1 26 0 2104 132 7 0 chr2 110827143 110827439 -142429144 - AluSx SINE Alu -14 298 1 2440 158 32 26 chr2 110827573 110828040 -142428543 + MER44D DNA MER2_type 1 525 -80 189 171 0 0 chr2 110828062 110828097 -142428486 + (TATATG)n Simple_repeat Simple_repeat 2 36 0 586 143 0 0 chr2 110828118 110828202 -142428381 + MER44D DNA MER2_type 522 605 0 595 254 40 35 chr2 110828987 110829188 -142427395 + MLT1I LTR MaLR 8 209 -200 260 285 8 0 chr2 110829754 110829877 -142426706 + (TA)n Simple_repeat Simple_repeat 2 125 0 22 0 0 0 chr2 110830267 110830289 -142426294 + AT_rich Low_complexity Low_complexity 1 22 0 1806 186 0 16 chr2 110831049 110831355 -142425228 - AluJo SINE Alu -11 301 1 2124 155 8 11 chr2 110831355 110831736 -142424847 + MLT1B LTR MaLR 11 390 0 243 331 76 52 chr2 110831762 110831934 -142424649 + L2 LINE L2 2797 2972 -342 282 287 113 0 chr2 110832382 110832497 -142424086 - LTR67 LTR ERVL -3 554 427 678 353 70 12 chr2 110833544 110834623 -142421960 - ERVL LTR ERVL -821 4943 3726 506 217 22 14 chr2 110836071 110836209 -142420374 - L1MB8 LINE L1 0 6178 6040 226 305 115 10 chr2 110836261 110836461 -142420122 - L1MB8 LINE L1 -273 5848 5628 23 54 0 0 chr2 110837735 110837772 -142418811 + AT_rich Low_complexity Low_complexity 1 37 0 210 229 0 0 chr2 110837779 110837827 -142418756 + (CTTTA)n Simple_repeat Simple_repeat 3 50 0 1460 95 0 0 chr2 110837848 110838048 -142418535 + L1PA13 LINE L1 5958 6157 -6 5454 147 21 52 chr2 110838070 110839250 -142417333 + L1MC1 LINE L1 5186 6327 -6 1700 234 48 85 chr2 110839258 110839449 -142417134 + L1MD3 LINE L1 6618 6814 -1181 1017 213 121 39 chr2 110839449 110839787 -142416796 + MLT1A2 LTR MaLR 5 370 -4 1700 234 48 85 chr2 110839787 110840280 -142416303 + L1MD3 LINE L1 6814 7277 -718 474 128 13 0 chr2 110840389 110840467 -142416116 - MADE1 DNA Mariner -1 79 1 24 0 0 0 chr2 110841128 110841152 -142415431 + AT_rich Low_complexity Low_complexity 1 24 0 231 226 71 36 chr2 110841583 110841667 -142414916 - MIR SINE MIR -174 88 2 2073 116 3 14 chr2 110841771 110842063 -142414520 + AluSq SINE Alu 2 290 -23 357 276 0 0 chr2 110842208 110842295 -142414288 - L1MC4 LINE L1 -1339 6703 6617 337 299 0 0 chr2 110842230 110842317 -142414266 + L1MC4 LINE L1 6614 6700 -1342 * 2079 98 62 0 chr2 110842317 110842592 -142413991 - AluSc SINE Alu -17 292 1 758 172 22 3 chr2 110843336 110843528 -142413055 + LTR54B LTR ERV1 5 251 -247 1765 158 3 7 chr2 110843528 110843813 -142412770 - AluJo SINE Alu -10 302 19 1326 148 13 4 chr2 110843814 110844044 -142412539 - LTR29 LTR ERV1 -4 618 387 1250 158 83 51 chr2 110844011 110844236 -142412347 - LTR49 LTR ERV1 -248 347 106 * 2068 156 24 16 chr2 110844236 110844608 -142411975 + THE1C LTR MaLR 1 375 0 1250 158 83 51 chr2 110844608 110844718 -142411865 - LTR49 LTR ERV1 -489 106 1 1292 137 18 4 chr2 110844749 110844975 -142411608 + LTR54 LTR ERV1 282 510 0 4212 133 54 23 chr2 110845117 110845141 -142411442 + MER4D LTR ERV1 1 23 -442 2177 124 0 3 chr2 110845141 110845440 -142411143 + AluSq SINE Alu 1 298 -15 4212 133 54 23 chr2 110845440 110846275 -142410308 + MER4D LTR ERV1 23 465 0 281 107 36 0 chr2 110846275 110846330 -142410253 + MER41A LTR ERV1 139 195 -359 1826 171 4 0 chr2 110846385 110846666 -142409917 - AluSx SINE Alu -30 282 1 316 179 9 46 chr2 110846667 110846776 -142409807 + MER41B LTR ERV1 403 474 -12 22 0 0 0 chr2 110847585 110847607 -142408976 + AT_rich Low_complexity Low_complexity 1 22 0 2421 81 0 10 chr2 110848113 110848423 -142408160 - AluY SINE Alu -4 307 1 288 326 12 0 chr2 110849439 110849525 -142407058 - MIR SINE MIR -21 241 155 1705 161 133 11 chr2 110849563 110849916 -142406667 - MSTD LTR MaLR 0 396 1 278 265 255 0 chr2 110850084 110850182 -142406401 - MER5A DNA MER1_type -1 188 66 420 267 160 0 chr2 110850358 110850508 -142406075 - MER96 DNA MER1_type -1 174 1 273 235 25 49 chr2 110851100 110851181 -142405402 - MIR SINE MIR -174 88 10 1731 199 0 5 chr2 110852123 110852494 -142404089 + L1 LINE L1 3686 4054 -2092 1622 182 105 3 chr2 110853619 110853970 -142402613 + MLT1B LTR MaLR 1 387 -3 244 174 14 14 chr2 110855386 110855455 -142401128 + (TA)n Simple_repeat Simple_repeat 2 70 0 214 378 185 0 chr2 110855739 110855890 -142400693 - MER5A DNA MER1_type -7 182 4 306 0 0 0 chr2 110856151 110856185 -142400398 + (CA)n Simple_repeat Simple_repeat 2 35 0 1823 102 158 75 chr2 110856721 110857094 -142399489 - MER4A LTR ERV1 0 664 261 558 124 21 10 chr2 110857094 110857191 -142399392 - MER4A LTR ERV1 -566 98 1 923 169 8 87 chr2 110857191 110857307 -142399276 + Charlie5 DNA MER1_type 2341 2426 -159 573 249 85 87 chr2 110857307 110857500 -142399083 - MER34 LTR ERV1 0 542 350 2381 85 3 0 chr2 110857500 110857794 -142398789 - AluSp SINE Alu -16 297 3 573 249 85 87 chr2 110857794 110858143 -142398440 - MER34 LTR ERV1 -192 350 1 923 169 8 87 chr2 110858143 110858292 -142398291 + Charlie5 DNA MER1_type 2426 2585 0 195 42 0 0 chr2 110858951 110858975 -142397608 + (TC)n Simple_repeat Simple_repeat 2 25 0 1848 175 14 0 chr2 110858993 110859290 -142397293 + AluJo SINE Alu 1 301 -11 2061 124 7 16 chr2 110859401 110859708 -142396875 + AluSq SINE Alu 1 304 -9 574 259 100 74 chr2 110859725 110860000 -142396583 + MER34 LTR ERV1 1 294 -248 352 147 67 13 chr2 110860000 110860075 -142396508 - MADE1 DNA Mariner -1 79 1 574 259 100 74 chr2 110860075 110860258 -142396325 + MER34 LTR ERV1 294 471 -71 2206 129 0 0 chr2 110860264 110860575 -142396008 - AluSx SINE Alu -1 311 1 756 150 15 13 chr2 110860619 110860781 -142395802 - L1ME2 LINE L1 -177 5987 5826 1955 174 16 5 chr2 110861082 110861461 -142395122 - L1MB3 LINE L1 -1 6182 5800 2369 141 25 0 chr2 110861461 110861907 -142394676 - L1M4c LINE L1 -4017 2367 1911 740 174 40 7 chr2 110861934 110862083 -142394500 + MLT1B LTR MaLR 187 340 -50 1900 167 16 5 chr2 110862084 110862456 -142394127 - L1M4c LINE L1 -4473 1911 1536 1048 143 25 107 chr2 110862510 110862790 -142393793 - L1MA4 LINE L1 -14 6286 6030 * 6871 163 43 43 chr2 110862788 110864314 -142392269 - L1M4c LINE L1 -4858 1526 1 1092 233 119 60 chr2 110865728 110866191 -142390392 - L2 LINE L2 -644 2670 2181 196 306 41 71 chr2 110866374 110866472 -142390111 + L2 LINE L2 3178 3272 0 192 339 82 38 chr2 110867414 110867597 -142388986 - MIR SINE MIR -11 251 61 208 330 110 37 chr2 110868109 110868218 -142388365 + L2 LINE L2 3129 3245 -27 1391 184 0 4 chr2 110868938 110869183 -142387400 - MLT1A1 LTR MaLR 0 365 122 180 266 16 62 chr2 110869363 110869400 -142387183 - L2 LINE L2 -12 3301 3268 475 268 32 16 chr2 110869400 110869523 -142387060 - MER5A DNA MER1_type -1 188 64 464 240 0 0 chr2 110869685 110869781 -142386802 + L1MEd LINE L1 1 96 -6023 986 240 60 109 chr2 110870542 110871108 -142385475 + MER34 LTR ERV1 1 538 -4 400 234 71 78 chr2 110871440 110871594 -142384989 - MLT1J1 LTR MaLR 0 446 294 * 655 274 0 30 chr2 110871591 110871755 -142384828 - MLT1J2 LTR MaLR -246 204 46 410 200 33 22 chr2 110871850 110871940 -142384643 - MLT1J2 LTR MaLR -307 143 53 198 0 0 0 chr2 110872977 110872999 -142383584 + (T)n Simple_repeat Simple_repeat 1 22 0 662 249 68 27 chr2 110873164 110873385 -142383198 - MLT1J1 LTR MaLR -153 293 64 235 294 47 12 chr2 110873317 110873402 -142383181 - LTR67 LTR ERVL -381 176 89 * 1169 307 119 28 chr2 110874836 110875694 -142380889 - ERVL LTR ERVL -921 4567 3789 1266 14 9 27 chr2 110875694 110875917 -142380666 + (TTC)n Simple_repeat Simple_repeat 1 219 0 1169 307 119 28 chr2 110875917 110876122 -142380461 - ERVL LTR ERVL -1699 3789 3604 2295 149 6 23 chr2 110876122 110876465 -142380118 + MER1B DNA MER1_type 1 337 0 1169 307 119 28 chr2 110876465 110876806 -142379777 - ERVL LTR ERVL -1884 3604 2997 1152 153 108 22 chr2 110876900 110877123 -142379460 - MSTA LTR MaLR 0 428 187 350 39 0 59 chr2 110877117 110877168 -142379415 - MSTA LTR MaLR -380 48 1 * 386 323 72 65 chr2 110877358 110877665 -142378918 - ERVL LTR ERVL -5042 722 414 301 275 203 22 chr2 110878849 110879031 -142377552 + MLT1H1 LTR MaLR 335 549 -6 229 135 39 0 chr2 110879250 110879302 -142377281 + A-rich Low_complexity Low_complexity 2 55 0 597 266 64 10 chr2 110879537 110879740 -142376843 - MIR SINE MIR 0 262 49 2284 88 7 0 chr2 110880135 110880440 -142376143 - AluSx SINE Alu -5 307 1 344 247 42 72 chr2 110880485 110880651 -142375932 - L1ME4a LINE L1 -157 5964 5804 387 291 155 19 chr2 110880850 110881056 -142375527 + MIR SINE MIR 26 259 -3 492 252 178 39 chr2 110881210 110881440 -142375143 + MIR SINE MIR 1 262 0 328 299 81 14 chr2 110881511 110881722 -142374861 + MLT1J2 LTR MaLR 131 355 -95 658 240 46 86 chr2 110882025 110882156 -142374427 + HsTC2 DNA Tc2 1292 1427 -471 2290 113 3 0 chr2 110882156 110882467 -142374116 + AluSq SINE Alu 1 312 -1 658 240 46 86 chr2 110882467 110882639 -142373944 + HsTC2 DNA Tc2 1427 1759 -139 1201 207 59 20 chr2 110882662 110882967 -142373616 - MER33 DNA MER1_type -6 318 2 245 298 64 0 chr2 110882989 110883083 -142373500 + HsTC2 DNA Tc2 1799 1898 0 333 266 147 28 chr2 110883925 110884068 -142372515 + MIR SINE MIR 31 190 -72 994 167 92 0 chr2 110884124 110884298 -142372285 - MER58A DNA MER1_type 0 224 35 21 0 0 0 chr2 110886153 110886174 -142370409 + AT_rich Low_complexity Low_complexity 1 21 0 387 0 0 0 chr2 110887524 110887567 -142369016 + (CAA)n Simple_repeat Simple_repeat 2 44 0 2393 82 0 13 chr2 110888465 110888780 -142367803 + AluY SINE Alu 1 311 0 2276 83 17 3 chr2 110891534 110891835 -142364748 - AluY SINE Alu -6 305 1 1412 143 0 18 chr2 110892724 110892947 -142363636 + AluSg/x SINE Alu 90 308 -4 349 316 103 0 chr2 110893167 110893284 -142363299 + MER91B DNA MER1_type 62 190 0 241 247 11 129 chr2 110893457 110893635 -142362948 + MER5A DNA MER1_type 1 157 -32 356 244 33 3 chr2 110893651 110893852 -142362731 - MER5C DNA MER1_type -50 274 9 1734 145 10 23 chr2 110894585 110894889 -142361694 + AluJb SINE Alu 7 306 -6 953 212 69 9 chr2 110895679 110895910 -142360673 - MER68 LTR ERV1 0 562 318 1359 187 67 38 chr2 110895910 110896253 -142360330 + MLT1A1 LTR MaLR 1 353 -12 1736 190 19 9 chr2 110896265 110896581 -142360002 - MER68 LTR ERV1 -240 322 4 695 71 0 0 chr2 110897026 110897111 -142359472 - AluY SINE Alu -14 297 213 309 282 20 50 chr2 110899110 110899259 -142357324 + L1ME LINE L1 5556 5686 -435 631 267 41 0 chr2 110899581 110899727 -142356856 - MIR SINE MIR -102 160 9 23989 144 23 18 chr2 110900560 110906676 -142349907 + L1M1 LINE L1 11 6162 -1403 288 56 0 0 chr2 110906676 110906712 -142349871 + MADE1 DNA Mariner 2 37 -43 405 0 0 0 chr2 110907353 110907398 -142349185 + (CA)n Simple_repeat Simple_repeat 2 46 0 291 71 0 0 chr2 110907398 110907440 -142349143 + (GA)n Simple_repeat Simple_repeat 1 42 0 2049 189 8 24 chr2 110907570 110907941 -142348642 - MLT1A1 LTR MaLR 0 365 1 1956 145 0 0 chr2 110908261 110908564 -142348019 + AluY SINE Alu 1 303 -8 733 239 61 17 chr2 110908851 110908984 -142347599 + MER5A DNA MER1_type 2 146 -43 1520 219 175 34 chr2 110908984 110909459 -142347124 + MLT1F LTR MaLR 1 542 0 733 239 61 17 chr2 110909459 110909505 -142347078 + MER5A DNA MER1_type 146 189 0 310 276 82 20 chr2 110909514 110909612 -142346971 - L2 LINE L2 0 3272 3169 293 299 172 0 chr2 110909622 110909779 -142346804 + L2 LINE L2 3113 3296 -17 1454 173 20 16 chr2 110910070 110910325 -142346258 - MSTA LTR MaLR 0 428 173 1197 76 0 0 chr2 110910325 110910469 -142346114 + AluSg/x SINE Alu 158 301 -11 754 165 165 0 chr2 110910474 110910632 -142345951 - MSTA LTR MaLR -244 184 1 611 292 31 0 chr2 110911549 110911744 -142344839 + MER3 DNA MER1_type 1 201 -8 419 240 19 0 chr2 110911757 110911861 -142344722 - MIR SINE MIR -108 154 49 1211 255 73 73 chr2 110913057 110913591 -142342992 + MLT1H1 LTR MaLR 2 535 -20 1305 162 34 26 chr2 110913659 110913893 -142342690 + MER46A DNA MER2_type 1 236 0 1044 229 28 0 chr2 110914398 110914616 -142341967 - MER58A DNA MER1_type 0 224 1 516 257 55 50 chr2 110914661 110914879 -142341704 + L1ME1 LINE L1 5945 6163 -3 187 304 116 0 chr2 110915362 110915431 -142341152 - L3 LINE CR1 -2 1575 1499 227 260 55 41 chr2 110915503 110915576 -142341007 - MER5B DNA MER1_type -98 80 7 261 247 44 82 chr2 110917106 110917288 -142339295 + MER104 DNA Tc2 6 180 0 792 236 113 15 chr2 110919495 110919698 -142336885 + MER58A DNA MER1_type 1 223 -1 3100 214 127 45 chr2 110919902 110920557 -142336026 - Charlie1a DNA MER1_type -1342 1419 648 2100 109 9 59 chr2 110920557 110920877 -142335706 + AluSp SINE Alu 1 304 -9 3100 214 127 45 chr2 110920877 110921244 -142335339 - Charlie1a DNA MER1_type -2113 648 313 546 221 44 25 chr2 110921242 110921400 -142335183 - Charlie1a DNA MER1_type -1252 203 43 * 386 198 239 18 chr2 110922496 110922663 -142333920 + MIR SINE MIR 9 212 -50 2246 121 0 6 chr2 110922665 110922979 -142333604 + AluSx SINE Alu 1 312 0 234 250 0 0 chr2 110925387 110925447 -142331136 + L2 LINE L2 3252 3311 -2 1948 193 10 20 chr2 110925789 110926189 -142330394 + MLT2C1 LTR ERVL 2 397 0 247 220 20 0 chr2 110929523 110929573 -142327010 - MARNA DNA Mariner -71 515 465 595 245 62 112 chr2 110929631 110930161 -142326422 + MLT1H1 LTR MaLR 1 528 -39 442 71 86 0 chr2 110930229 110930299 -142326284 - L1PA16 LINE L1 -5 6161 6086 255 313 36 9 chr2 110930445 110930557 -142326026 + MARNA DNA Mariner 414 528 -58 569 285 12 6 chr2 110930717 110930889 -142325694 - MIR SINE MIR -24 238 66 191 147 29 0 chr2 110930994 110931028 -142325555 - MER5C DNA MER1_type -5 319 285 582 183 17 0 chr2 110931090 110931205 -142325378 - MER5C DNA MER1_type -205 119 3 582 280 39 90 chr2 110931359 110931938 -142324645 - MER21B LTR ERV1 -132 799 179 895 121 0 14 chr2 110931941 110932081 -142324502 - AluSg/x SINE Alu -1 309 172 522 282 34 27 chr2 110932081 110932230 -142324353 - MER21B LTR ERV1 -674 189 40 2881 136 26 9 chr2 110932650 110933105 -142323478 + LTR24 LTR ERV1 5 467 0 4455 176 30 33 chr2 110933109 110934015 -142322568 + MER4D LTR ERV1 1 903 0 192 77 0 0 chr2 110935570 110935596 -142320987 + (T)n Simple_repeat Simple_repeat 1 26 0 283 348 54 0 chr2 110936400 110936512 -142320071 + L2 LINE L2 3155 3272 0 204 289 176 7 chr2 110938180 110938322 -142318261 + MIR SINE MIR 81 246 -16 245 229 25 42 chr2 110938390 110938508 -142318075 + (TTATA)n Simple_repeat Simple_repeat 4 119 0 775 164 62 31 chr2 110938648 110938843 -142317740 + Ricksha DNA DNA 2564 2764 -90 24 67 0 0 chr2 110939599 110939644 -142316939 + AT_rich Low_complexity Low_complexity 1 45 0 335 278 113 0 chr2 110939912 110940027 -142316556 + MIR SINE MIR 57 184 -78 220 293 47 36 chr2 110940518 110940647 -142315936 - MIR SINE MIR -63 145 42 2127 120 0 3 chr2 110941230 110941544 -142315039 + AluSx SINE Alu 1 313 0 1382 297 111 15 chr2 110943223 110944206 -142312377 + L2 LINE L2 2216 3290 -23 229 290 60 20 chr2 110945302 110945402 -142311181 - L2 LINE L2 -23 3290 3187 2116 116 0 10 chr2 110945485 110945788 -142310795 - AluSx SINE Alu -2 310 11 259 302 99 47 chr2 110946937 110947109 -142309474 - MIR3 SINE MIR -20 188 8 297 291 8 52 chr2 110947498 110947632 -142308951 + MIR SINE MIR 57 184 -78 268 282 43 26 chr2 110947749 110947866 -142308717 + MER5A DNA MER1_type 7 125 -64 250 261 57 23 chr2 110948465 110948553 -142308030 + MIR SINE MIR 71 161 -101 1327 199 9 60 chr2 110948756 110949072 -142307511 + MER63B DNA MER1_type 1 300 -136 207 283 152 0 chr2 110949571 110949663 -142306920 - MIR SINE MIR -58 150 45 358 312 40 47 chr2 110949906 110950075 -142306508 - MIR SINE MIR -6 256 88 3883 207 87 39 chr2 110950075 110951067 -142305516 + MER45B DNA AcHobo 2 1040 0 358 312 40 47 chr2 110951067 110951150 -142305433 - MIR SINE MIR -174 88 6 6801 117 29 53 chr2 110954811 110956072 -142300511 - Tigger3b DNA MER2_type -1 1230 1 189 0 0 0 chr2 110956460 110956481 -142300102 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 1317 86 46 6 chr2 110956488 110956663 -142299920 - AluSq SINE Alu -26 287 106 1858 162 3 19 chr2 110959028 110959343 -142297240 - AluSx SINE Alu -2 310 1 835 185 6 43 chr2 110959833 110959995 -142296588 - FRAM SINE Alu -19 157 2 772 210 68 6 chr2 110960417 110960593 -142295990 + L1ME3A LINE L1 5943 6129 -41 1204 218 20 59 chr2 110961926 110962052 -142294531 - MER2 DNA MER2_type 0 345 216 1644 176 4 4 chr2 110962052 110962325 -142294258 + AluJo SINE Alu 6 278 -34 1204 218 20 59 chr2 110962325 110962345 -142294238 - MER2 DNA MER2_type -129 216 197 703 216 0 8 chr2 110962345 110962479 -142294104 + FLAM_C SINE Alu 1 133 0 1204 218 20 59 chr2 110962479 110962689 -142293894 - MER2 DNA MER2_type -148 197 2 209 192 48 55 chr2 110963542 110963688 -142292895 + (TTATA)n Simple_repeat Simple_repeat 5 149 0 * 370 173 62 23 chr2 110963602 110963945 -142292638 + (TA)n Simple_repeat Simple_repeat 1 356 0 222 200 0 0 chr2 110964767 110964807 -142291776 + (TG)n Simple_repeat Simple_repeat 2 41 0 1742 171 26 13 chr2 110964842 110965147 -142291436 - AluJo SINE Alu -3 309 1 342 292 218 10 chr2 110966170 110966372 -142290211 + MIR SINE MIR 19 262 0 206 383 46 5 chr2 110968084 110968280 -142288303 - L3b LINE CR1 -209 1374 1171 241 238 36 0 chr2 110968778 110968862 -142287721 - L1MC4 LINE L1 -1339 6703 6617 25 75 0 0 chr2 110970639 110970692 -142285891 + GC_rich Low_complexity Low_complexity 1 53 0 25 40 0 20 chr2 110972129 110972155 -142284428 + AT_rich Low_complexity Low_complexity 1 27 -22 2945 6 0 0 chr2 110972155 110972473 -142284110 + AluYb8 SINE Alu 1 318 0 25 40 0 20 chr2 110972473 110972496 -142284087 + AT_rich Low_complexity Low_complexity 27 49 0 226 248 83 121 chr2 110972647 110972700 -142283883 + MIR SINE MIR 110 163 -99 2350 73 3 0 chr2 110972700 110973001 -142283582 + AluSg SINE Alu 1 302 -8 226 248 83 121 chr2 110973001 110973104 -142283479 + MIR SINE MIR 163 260 -2 192 296 56 0 chr2 110974816 110974870 -142281713 + MIR SINE MIR 19 75 -133 227 196 0 0 chr2 110975184 110975230 -142281353 - MIR SINE MIR -44 218 173 2171 204 50 84 chr2 110975260 110976060 -142280523 - L1MC4 LINE L1 0 8042 7270 2383 96 0 16 chr2 110976203 110976516 -142280067 - AluSx SINE Alu 0 312 5 1482 152 7 15 chr2 110976641 110976911 -142279672 + MER89 LTR ERV1 292 559 0 2228 108 3 13 chr2 110977624 110977931 -142278652 - AluY SINE Alu -7 304 1 2024 180 70 8 chr2 110978220 110978621 -142277962 + MSTB LTR MaLR 1 426 0 1298 223 56 42 chr2 110978816 110979141 -142277442 + Charlie1b DNA MER1_type 9 343 -2418 3359 210 24 11 chr2 110979141 110979865 -142276718 + MER44D DNA MER2_type 1 605 0 1298 223 56 42 chr2 110979865 110979987 -142276596 + Charlie1b DNA MER1_type 343 462 -61 764 136 0 0 chr2 110979987 110980097 -142276486 + AluSq/x SINE Alu 1 110 -203 1994 143 3 13 chr2 110981210 110981518 -142275065 - AluSx SINE Alu -7 305 1 378 0 0 0 chr2 110981685 110981727 -142274856 + (CA)n Simple_repeat Simple_repeat 2 43 0 2215 171 18 16 chr2 110981972 110982410 -142274173 - Tigger2 DNA MER2_type 0 2718 2280 2078 89 59 7 chr2 110982419 110982722 -142273861 - L1PA10 LINE L1 -15 6153 5835 992 61 0 0 chr2 110982722 110982854 -142273729 + L1PA10 LINE L1 5681 5812 -356 383 179 0 0 chr2 110982863 110982930 -142273653 - Tigger2 DNA MER2_type -2649 69 3 1064 275 96 10 chr2 110982973 110983369 -142273214 + MER119 DNA MER1_type 1 430 -153 2393 229 47 15 chr2 110983369 110983964 -142272619 + MER82 DNA MER2_type 1 614 -39 417 228 47 47 chr2 110983980 110984129 -142272454 + MER119 DNA MER1_type 432 580 -3 7755 16 0 0 chr2 110984678 110986168 -142270415 - L1PA2 LINE L1 -3 6152 4665 356 271 76 16 chr2 110986296 110986520 -142270063 + L1ME3A LINE L1 5262 5495 -667 617 242 22 22 chr2 110986557 110986739 -142269844 + L1ME3A LINE L1 5724 5905 -265 4370 246 92 15 chr2 110986753 110988824 -142267759 - L1MC/D LINE L1 -679 5957 3741 1219 273 74 10 chr2 110988820 110989307 -142267276 - L1MC/D LINE L1 -5202 1338 821 * 630 259 140 0 chr2 110989568 110989804 -142266779 - LTR16C LTR ERVL -3 488 220 1649 106 0 9 chr2 110989972 110990199 -142266384 + AluSg1 SINE Alu 1 225 -84 856 260 89 43 chr2 110991850 110992265 -142264318 - MLT1C LTR MaLR -28 439 6 1469 123 32 16 chr2 110993169 110993422 -142263161 + MSTB1 LTR MaLR 174 430 -2 590 133 0 20 chr2 110993571 110993669 -142262914 + L1P LINE L1 1 96 -6050 25831 70 5 3 chr2 110993669 110997261 -142259322 + L1P LINE L1 623 4222 -1924 19965 167 50 11 chr2 110997261 110998708 -142257875 + ERVL-D LTR ERVL 1482 2871 -2893 429 36 0 0 chr2 110998708 110998763 -142257820 + (CA)n Simple_repeat Simple_repeat 2 56 0 19965 167 50 11 chr2 110998763 111001001 -142255582 + ERVL-D LTR ERVL 2871 5311 -453 1400 173 0 0 chr2 111001001 111001215 -142255368 + AluJb SINE Alu 85 298 -14 1304 183 154 38 chr2 111001228 111001349 -142255234 + ERVL-D LTR ERVL 5295 5401 -363 264 30 0 0 chr2 111001349 111001382 -142255201 + (TG)n Simple_repeat Simple_repeat 2 34 0 1531 167 178 0 chr2 111001385 111001678 -142254905 - MER7A DNA MER2_type 0 346 4 1304 183 154 38 chr2 111001678 111001973 -142254610 + ERVL-D LTR ERVL 5402 5764 0 439 169 44 29 chr2 111001859 111001995 -142254588 + Ricksha DNA DNA 237 374 -880 * 978 251 33 36 chr2 111001995 111002326 -142254257 + MLT2D LTR ERVL 83 412 -2 227 235 0 0 chr2 111002435 111002486 -142254097 - MLT1L LTR MaLR -409 206 156 1045 253 9 9 chr2 111002487 111002815 -142253768 + L1M4 LINE L1 5016 5343 -803 501 282 127 34 chr2 111002836 111003127 -142253456 + MLT1L LTR MaLR 246 563 -52 180 0 0 0 chr2 111004456 111004476 -142252107 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 1467 195 105 0 chr2 111004481 111004815 -142251768 - L1MC2 LINE L1 -12 6332 5964 1007 133 53 0 chr2 111004831 111004981 -142251602 + FRAM SINE Alu 1 158 -18 1678 152 26 3 chr2 111004987 111005289 -142251294 - L1MB2 LINE L1 -2 6169 5861 2401 191 14 2 chr2 111005305 111005792 -142250791 - MER34 LTR ERV1 -22 520 28 2717 189 45 10 chr2 111005804 111006166 -142250417 - L1MB2 LINE L1 -307 5864 5516 186 43 0 0 chr2 111006166 111006189 -142250394 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 2717 189 45 10 chr2 111006189 111006646 -142249937 - L1MB2 LINE L1 -655 5516 5013 1109 237 86 33 chr2 111006648 111007007 -142249576 + MSTD LTR MaLR 1 378 -18 4984 232 20 5 chr2 111007020 111008328 -142248255 - L1MB2 LINE L1 -1131 5015 3689 4347 261 43 23 chr2 111008328 111010342 -142246241 - L1MCa LINE L1 -1415 5011 2924 4372 59 24 16 chr2 111010383 111011408 -142245175 - MER11A LTR ERVK 0 1266 1 2989 239 114 24 chr2 111011419 111013746 -142242837 - L1MCa LINE L1 -3549 2877 413 207 0 0 0 chr2 111013746 111013769 -142242814 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2989 239 114 24 chr2 111013769 111013836 -142242747 - L1MCa LINE L1 -6013 413 353 363 308 165 31 chr2 111014478 111014702 -142241881 + MIR SINE MIR 6 259 -3 2155 102 0 0 chr2 111014841 111015150 -142241433 + AluSx SINE Alu 9 317 0 372 226 123 19 chr2 111015210 111015316 -142241267 + MIR SINE MIR 104 220 -42 204 319 25 59 chr2 111015363 111015482 -142241101 + MIR SINE MIR 146 260 -2 215 192 39 26 chr2 111016134 111016212 -142240371 + A-rich Low_complexity Low_complexity 5 83 0 303 28 0 0 chr2 111016839 111016875 -142239708 + (TG)n Simple_repeat Simple_repeat 2 37 0 310 307 101 44 chr2 111017692 111017920 -142238663 + MIR SINE MIR 21 261 -1 323 219 0 0 chr2 111017975 111018048 -142238535 + Charlie4 DNA MER1_type 72 144 -1817 916 218 37 0 chr2 111018165 111018381 -142238202 + MER58A DNA MER1_type 1 224 0 326 313 23 23 chr2 111018478 111018606 -142237977 - L2 LINE L2 -22 3291 3164 1303 253 16 29 chr2 111019325 111019789 -142236794 - MER89 LTR ERV1 0 559 3 1951 177 34 32 chr2 111020119 111020665 -142235918 - MLT2A2 LTR ERVL -4 550 1 320 272 0 0 chr2 111021409 111021490 -142235093 - L1MEc LINE L1 -2931 3284 3204 333 260 0 0 chr2 111021497 111021601 -142234982 - L1MEc LINE L1 -4050 2346 2243 34 42 0 0 chr2 111022239 111022287 -142234296 + AT_rich Low_complexity Low_complexity 1 48 0 22 0 0 0 chr2 111023500 111023522 -142233061 + AT_rich Low_complexity Low_complexity 1 22 0 207 75 25 50 chr2 111024049 111024089 -142232494 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 541 313 78 45 chr2 111025639 111025997 -142230586 - MLT1I LTR MaLR 0 409 40 22 56 0 0 chr2 111026005 111026041 -142230542 + AT_rich Low_complexity Low_complexity 1 36 0 724 189 23 0 chr2 111026041 111026173 -142230410 - AluJb SINE Alu -177 135 1 617 241 0 15 chr2 111026470 111026665 -142229918 + L1MEc LINE L1 2155 2346 -4050 285 183 0 0 chr2 111027217 111027277 -142229306 + (TAG)n Simple_repeat Simple_repeat 1 60 0 485 324 122 9 chr2 111027388 111027724 -142228859 + HsTC2 DNA Tc2 493 866 -1032 14715 31 15 0 chr2 111029178 111031693 -142224890 + L1PA4 LINE L1 3621 6147 -8 1285 244 13 45 chr2 111031959 111032336 -142224247 - MLT1A1 LTR MaLR 0 365 1 3459 133 20 65 chr2 111033471 111034106 -142222477 - L1MA4A LINE L1 -413 6592 6005 2432 132 6 3 chr2 111034106 111034469 -142222114 - THE1B LTR MaLR 0 364 1 3459 133 20 65 chr2 111034469 111034998 -142221585 - L1MA4A LINE L1 -1000 6005 5454 322 221 0 0 chr2 111034998 111035066 -142221517 - L1MA4A LINE L1 -2462 4386 4319 259 210 60 10 chr2 111035088 111035188 -142221395 + L1MEc LINE L1 2963 3067 -3148 1635 204 9 9 chr2 111035198 111035625 -142220958 - L1MA4A LINE L1 -2542 4306 3880 264 213 67 13 chr2 111035626 111035701 -142220882 + L1M4c LINE L1 2401 2479 -3905 1357 96 101 0 chr2 111035705 111035893 -142220690 - AluY SINE Alu -52 259 53 1180 74 0 0 chr2 111035893 111036056 -142220527 - L1PA8A LINE L1 -390 5741 5579 546 69 0 0 chr2 111036056 111036128 -142220455 - AluY SINE Alu -239 72 1 180 0 0 0 chr2 111036136 111036156 -142220427 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1846 141 48 63 chr2 111036158 111036555 -142220028 - L1MA4A LINE L1 -4189 2660 2270 3328 185 121 9 chr2 111036774 111037574 -142219009 + L1MC3 LINE L1 6856 7745 -40 29 0 0 0 chr2 111037580 111037609 -142218974 + AT_rich Low_complexity Low_complexity 1 29 0 226 329 71 0 chr2 111037973 111038058 -142218525 - MIR3 SINE MIR -5 203 113 1067 221 62 42 chr2 111039030 111039387 -142217196 + L1ME3A LINE L1 5798 6161 -9 906 150 14 0 chr2 111039406 111039553 -142217030 + FRAM SINE Alu 20 168 -8 268 192 231 0 chr2 111041321 111041425 -142215158 - L1MC4a LINE L1 0 7808 7681 245 135 58 0 chr2 111041422 111041474 -142215109 - L1MC4a LINE L1 -745 7063 7009 * 217 184 0 46 chr2 111041520 111041607 -142214976 + (TCTA)n Simple_repeat Simple_repeat 2 84 0 1057 240 27 7 chr2 111041616 111041912 -142214671 - L1MC4a LINE L1 -817 6991 6690 283 111 16 16 chr2 111042079 111042142 -142214441 - L1ME4a LINE L1 -5 6116 6054 296 176 15 0 chr2 111042273 111042341 -142214242 - L1ME4a LINE L1 -267 5854 5786 2200 121 7 0 chr2 111042531 111042836 -142213747 - AluSx SINE Alu -3 309 3 230 230 44 16 chr2 111043137 111043224 -142213359 - MIR SINE MIR -77 131 43 594 268 107 46 chr2 111045424 111045771 -142210812 + LTR16A LTR ERVL 83 450 0 1060 207 0 18 chr2 111045886 111046108 -142210475 + MER20 DNA MER1_type 2 219 0 716 169 30 90 chr2 111046186 111046387 -142210196 - MER5A DNA MER1_type 0 189 1 327 85 0 0 chr2 111046850 111046897 -142209686 + L1PA8 LINE L1 6119 6165 -7 1673 160 34 14 chr2 111048089 111048383 -142208200 + AluJo SINE Alu 1 300 -12 320 165 176 24 chr2 111048427 111048512 -142208071 - FLAM_C SINE Alu -30 103 6 767 278 65 12 chr2 111048515 111048763 -142207820 - L2 LINE L2 -529 2785 2525 275 284 12 0 chr2 111048893 111048974 -142207609 - LTR16A1 LTR ERVL -2 455 374 355 234 13 0 chr2 111049018 111049095 -142207488 + MER81 DNA DNA 36 113 -1 279 279 170 74 chr2 111050585 111050897 -142205686 - L2 LINE L2 -17 3255 2914 404 273 32 13 chr2 111051860 111052014 -142204569 - LTR16A LTR ERVL -152 298 142 798 240 120 27 chr2 111052027 111052285 -142204298 + MER21B LTR ERV1 21 302 -561 255 364 22 9 chr2 111052285 111052510 -142204073 - HERVL LTR ERVL -1514 4140 3913 329 355 31 21 chr2 111052741 111053031 -142203552 - HERVL LTR ERVL -1850 3635 3343 2211 128 100 5 chr2 111053066 111053495 -142203088 - MER50 LTR ERV1 -264 470 1 507 278 125 52 chr2 111053521 111053571 -142203012 - HERVL LTR ERVL -2638 3126 3081 1451 206 18 84 chr2 111053571 111054013 -142202570 + MLT2D LTR ERVL 1 413 -1 507 278 125 52 chr2 111054013 111054307 -142202276 - HERVL LTR ERVL -2683 3081 2757 2075 319 54 22 chr2 111054339 111054710 -142201873 - HERVL LTR ERVL -2367 2629 2271 6623 160 26 10 chr2 111054710 111055920 -142200663 - Tigger3b DNA MER2_type -1 1230 1 2075 319 54 22 chr2 111055920 111057661 -142198922 - HERVL LTR ERVL -2725 2271 362 856 311 68 15 chr2 111058036 111058432 -142198151 - LTR16A LTR ERVL -16 434 18 21 0 0 0 chr2 111058696 111058717 -142197866 + AT_rich Low_complexity Low_complexity 1 21 0 493 288 110 46 chr2 111059350 111059832 -142196751 - L1ME4a LINE L1 -208 5913 5401 1554 178 19 68 chr2 111060082 111060492 -142196091 + MLT1B LTR MaLR 1 390 0 221 354 73 12 chr2 111061756 111061920 -142194663 - L2 LINE L2 -173 3099 2926 23 0 0 0 chr2 111062216 111062239 -142194344 + AT_rich Low_complexity Low_complexity 1 23 0 2012 63 66 22 chr2 111062285 111062556 -142194027 - AluY SINE Alu -4 307 25 23 0 0 0 chr2 111063235 111063258 -142193325 + AT_rich Low_complexity Low_complexity 1 23 0 283 203 0 54 chr2 111064387 111064461 -142192122 + (CATG)n Simple_repeat Simple_repeat 2 71 0 719 160 0 0 chr2 111064609 111064728 -142191855 - FLAM_C SINE Alu -2 141 23 565 364 85 24 chr2 111065132 111065462 -142191121 + L3 LINE CR1 288 637 -940 4332 202 35 10 chr2 111065782 111066992 -142189591 - L1MD2 LINE L1 -13 6346 5107 3836 211 74 6 chr2 111067010 111068004 -142188579 - L1MC3 LINE L1 0 7785 6724 485 279 112 10 chr2 111068275 111068472 -142188111 + MLT1L LTR MaLR 351 567 -48 206 253 96 68 chr2 111068713 111068859 -142187724 - L2 LINE L2 -1 3312 3163 217 238 0 0 chr2 111068960 111069002 -142187581 + GA-rich Low_complexity Low_complexity 4 45 0 1990 143 3 3 chr2 111069915 111070202 -142186381 - AluSx SINE Alu -25 287 1 197 225 0 0 chr2 111071071 111071111 -142185472 - MIR3 SINE MIR -50 158 119 335 240 23 93 chr2 111071281 111071320 -142185263 + MIR SINE MIR 117 157 -105 2195 171 15 0 chr2 111071320 111071717 -142184866 + MER57A LTR ERV1 1 403 0 335 240 23 93 chr2 111071717 111071806 -142184777 + MIR SINE MIR 157 236 -26 28 29 0 0 chr2 111073584 111073619 -142182964 + AT_rich Low_complexity Low_complexity 1 35 0 197 351 0 0 chr2 111074472 111074529 -142182054 + L3b LINE CR1 1378 1434 -149 3145 178 70 46 chr2 111074972 111075501 -142181082 + L1MB3 LINE L1 5377 5931 -252 2042 118 0 17 chr2 111075501 111075790 -142180793 + AluSg SINE Alu 1 284 -26 3145 178 70 46 chr2 111075790 111076017 -142180566 + L1MB3 LINE L1 5931 6151 -32 1207 284 95 71 chr2 111076122 111077140 -142179443 + MER69B DNA AcHobo 43 1094 -1432 1102 183 5 5 chr2 111077140 111077337 -142179246 + L1PB4 LINE L1 5960 6156 0 1207 284 95 71 chr2 111077337 111077465 -142179118 + MER69B DNA AcHobo 1094 1217 -9 180 256 0 0 chr2 111077584 111077623 -142178960 + L2 LINE L2 3222 3260 -12 195 294 71 90 chr2 111077709 111077920 -142178663 + L2 LINE L2 2596 2802 -512 1782 172 34 97 chr2 111078275 111078717 -142177866 + MLT2D LTR ERVL 1 414 0 274 331 110 15 chr2 111078846 111078982 -142177601 + L2 LINE L2 3123 3271 -1 489 281 26 8 chr2 111082344 111082499 -142174084 - MIR SINE MIR -61 147 35 452 259 95 0 chr2 111082762 111082920 -142173663 + MER5B DNA MER1_type 5 177 -1 1118 190 28 40 chr2 111083040 111083287 -142173296 + MLT1E1 LTR MaLR 22 265 -389 799 280 49 13 chr2 111083329 111083473 -142173110 + MLT1E1 LTR MaLR 422 578 -76 3375 184 176 82 chr2 111083473 111084405 -142172178 + LTR28 LTR ERV1 1 1020 0 799 280 49 13 chr2 111084405 111084485 -142172098 + MLT1E1 LTR MaLR 578 654 0 25 31 0 0 chr2 111085270 111085302 -142171281 + AT_rich Low_complexity Low_complexity 1 32 0 340 252 50 17 chr2 111085345 111085464 -142171119 - L1MC5 LINE L1 -30 7931 7809 1101 224 74 13 chr2 111086707 111087019 -142169564 - MER58B DNA MER1_type -2 339 9 27 0 0 0 chr2 111087094 111087121 -142169462 + AT_rich Low_complexity Low_complexity 1 27 0 215 250 0 17 chr2 111088315 111088375 -142168208 + CT-rich Low_complexity Low_complexity 3 61 0 335 272 0 0 chr2 111088820 111088912 -142167671 + G-rich Low_complexity Low_complexity 4 95 0 1574 214 101 33 chr2 111088926 111089380 -142167203 - Charlie1b DNA MER1_type 0 523 39 444 287 81 34 chr2 111089880 111090023 -142166560 - MER112 DNA MER1_type -40 220 62 201 39 0 0 chr2 111090023 111090049 -142166534 + (TG)n Simple_repeat Simple_repeat 2 27 0 444 287 81 34 chr2 111090049 111090114 -142166469 - MER112 DNA MER1_type -198 62 2 218 303 34 34 chr2 111090515 111090604 -142165979 + L2 LINE L2 2412 2500 -814 181 318 30 0 chr2 111090957 111091023 -142165560 + L2 LINE L2 3184 3251 -62 1478 241 22 27 chr2 111091132 111091497 -142165086 + MLT2D LTR ERVL 2 364 -50 1931 114 4 0 chr2 111091498 111091752 -142164831 + AluSq SINE Alu 1 255 -58 225 94 0 0 chr2 111091765 111091797 -142164786 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 236 224 0 45 chr2 111091844 111091911 -142164672 + MLT2D LTR ERVL 399 462 -2 212 0 36 0 chr2 111092074 111092102 -142164481 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 2106 36 0 28 chr2 111092303 111092555 -142164028 - L1PA4 LINE L1 0 6155 5911 22 94 0 0 chr2 111093859 111093923 -142162660 + AT_rich Low_complexity Low_complexity 1 64 0 185 108 27 0 chr2 111094883 111094920 -142161663 + (CA)n Simple_repeat Simple_repeat 2 39 0 233 151 19 0 chr2 111095135 111095188 -142161395 + CT-rich Low_complexity Low_complexity 4 57 0 1611 129 105 21 chr2 111095478 111095766 -142160817 + MSTA LTR MaLR 1 331 -44 183 42 0 0 chr2 111095766 111095790 -142160793 + (TA)n Simple_repeat Simple_repeat 1 24 0 1611 129 105 21 chr2 111095790 111095840 -142160743 + MSTA LTR MaLR 331 375 0 198 0 0 0 chr2 111097555 111097577 -142159006 + (TG)n Simple_repeat Simple_repeat 2 23 0 248 339 32 38 chr2 111097590 111097776 -142158807 + MIR SINE MIR 4 188 -74 1876 190 29 16 chr2 111098243 111098387 -142158196 - L1MB4 LINE L1 -17 6163 6022 3101 109 16 9 chr2 111098387 111098774 -142157809 + MLT2A1 LTR ERVL 1 393 -51 348 24 0 0 chr2 111098774 111098815 -142157768 + (CA)n Simple_repeat Simple_repeat 2 42 0 3101 109 16 9 chr2 111098815 111098868 -142157715 + MLT2A1 LTR ERVL 393 444 0 1876 190 29 16 chr2 111098868 111099102 -142157481 - L1MB4 LINE L1 -158 6022 5780 1176 232 113 3 chr2 111099102 111099412 -142157171 + MER2 DNA MER2_type 2 345 0 2314 185 41 53 chr2 111099412 111099598 -142156985 - L1MB4 LINE L1 -398 5782 5595 1538 127 4 49 chr2 111099598 111099866 -142156717 + AluSg SINE Alu 48 304 0 2314 185 41 53 chr2 111099866 111100370 -142156213 - L1MB4 LINE L1 -585 5595 5088 1880 129 187 58 chr2 111100729 111100786 -142155797 - MSTA LTR MaLR 0 428 380 2360 56 0 11 chr2 111100786 111101094 -142155489 - AluY SINE Alu 0 305 1 1880 129 187 58 chr2 111101094 111101414 -142155169 - MSTA LTR MaLR -48 380 1 353 257 119 0 chr2 111102505 111102614 -142153969 - L2 LINE L2 -481 2833 2712 1518 240 26 9 chr2 111103016 111103362 -142153221 - MLT1A1 LTR MaLR -13 352 1 231 231 49 51 chr2 111103396 111103506 -142153077 + MIR SINE MIR 41 139 -69 215 276 40 13 chr2 111103627 111103703 -142152880 + MIR SINE MIR 79 156 -106 180 0 0 0 chr2 111104631 111104651 -142151932 + (TTG)n Simple_repeat Simple_repeat 2 21 0 259 277 129 50 chr2 111104727 111104811 -142151772 + MIR SINE MIR 2 97 -165 2014 185 96 10 chr2 111104811 111105205 -142151378 + MSTA LTR MaLR 1 428 0 259 277 129 50 chr2 111105205 111105221 -142151362 + MIR SINE MIR 97 110 -152 1092 249 158 16 chr2 111105323 111105709 -142150874 - MLT1J1 LTR MaLR -2 444 4 1294 273 104 15 chr2 111106257 111106730 -142149853 + L2 LINE L2 2264 2778 -536 1800 171 7 0 chr2 111106732 111107019 -142149564 + AluJb SINE Alu 1 289 -23 658 299 67 59 chr2 111107113 111107330 -142149253 + L2 LINE L2 2936 3160 -153 1993 71 42 46 chr2 111107330 111107637 -142148946 - AluY SINE Alu 0 306 1 658 299 67 59 chr2 111107637 111107793 -142148790 + L2 LINE L2 3160 3313 0 290 281 163 26 chr2 111108005 111108158 -142148425 + MIR3 SINE MIR 17 190 -18 1045 234 39 13 chr2 111108223 111108802 -142147781 - MLT2F LTR ERVL 0 663 1 307 364 43 22 chr2 111109005 111109189 -142147394 - MIR3 SINE MIR -7 201 14 413 327 98 53 chr2 111110489 111110847 -142145736 + L3 LINE CR1 1077 1450 -127 225 0 0 0 chr2 111110941 111110966 -142145617 + (A)n Simple_repeat Simple_repeat 1 25 0 251 140 140 0 chr2 111111169 111111219 -142145364 - MER91 DNA MER1_type -7 133 77 310 236 66 9 chr2 111112125 111112231 -142144352 - L1MB8 LINE L1 -3 6175 6064 216 0 0 0 chr2 111112238 111112262 -142144321 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 21 0 0 0 chr2 111112394 111112415 -142144168 + AT_rich Low_complexity Low_complexity 1 21 0 282 95 0 0 chr2 111113092 111113134 -142143449 + (TG)n Simple_repeat Simple_repeat 1 42 0 198 0 0 0 chr2 111113262 111113284 -142143299 + (TTTAA)n Simple_repeat Simple_repeat 3 24 0 1991 136 3 7 chr2 111113284 111113569 -142143014 - AluSx SINE Alu -26 286 1 2135 149 146 8 chr2 111113683 111114059 -142142524 - MSTA LTR MaLR 0 428 1 381 322 62 20 chr2 111114059 111114363 -142142220 + L1ME LINE L1 3791 4107 -2039 250 185 98 33 chr2 111114472 111114564 -142142019 + L1ME LINE L1 4279 4376 -1770 421 249 120 34 chr2 111114685 111114918 -142141665 - L2 LINE L2 0 3313 3061 509 285 139 55 chr2 111114980 111115228 -142141355 - L2 LINE L2 -410 2904 2678 188 0 74 0 chr2 111115228 111115255 -142141328 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 2201 46 4 0 chr2 111115261 111115520 -142141063 - L1PA4 LINE L1 -2 6153 5894 509 285 139 55 chr2 111115520 111115759 -142140824 - L2 LINE L2 -640 2674 2368 370 278 60 22 chr2 111115766 111116005 -142140578 + L1ME LINE L1 4545 5081 -1065 21 0 0 0 chr2 111117054 111117075 -142139508 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr2 111117637 111117660 -142138923 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2677 41 3 9 chr2 111118369 111118687 -142137896 - L1PA4 LINE L1 -1 6154 5839 4107 171 11 11 chr2 111118881 111119670 -142136913 + L1MA6 LINE L1 4521 5309 -837 14896 179 44 14 chr2 111119716 111127035 -142129548 + L1PA14 LINE L1 5 7598 -1 4948 151 37 33 chr2 111127080 111127546 -142129037 + L1MA6 LINE L1 5318 5781 -519 207 0 0 0 chr2 111127546 111127569 -142129014 + (CA)n Simple_repeat Simple_repeat 2 24 0 4948 151 37 33 chr2 111127569 111128077 -142128506 + L1MA6 LINE L1 5781 6296 -4 256 313 48 0 chr2 111128092 111128175 -142128408 - MIR SINE MIR 0 262 176 337 333 44 44 chr2 111128268 111128448 -142128135 + L1ME LINE L1 5311 5490 -631 2223 79 0 4 chr2 111128448 111128727 -142127856 + AluY SINE Alu 22 299 -12 337 333 44 44 chr2 111128727 111128909 -142127674 + L1ME LINE L1 5489 5673 -448 266 322 7 7 chr2 111128913 111129056 -142127527 + L1ME LINE L1 5721 5863 -258 344 298 83 29 chr2 111129426 111129631 -142126952 + L1MEd LINE L1 991 1206 -4913 353 270 107 26 chr2 111129930 111130163 -142126420 + L1M4 LINE L1 4497 4748 -1398 31 44 0 0 chr2 111130456 111130501 -142126082 + AT_rich Low_complexity Low_complexity 1 45 0 2927 122 12 21 chr2 111130501 111130983 -142125600 - L1MA2 LINE L1 -104 6200 5723 9841 158 38 27 chr2 111130992 111134214 -142122369 - L1 LINE L1 -2227 5338 2073 2639 226 22 19 chr2 111134212 111134793 -142121790 - L1 LINE L1 -6972 593 11 * 2269 92 0 0 chr2 111134798 111135092 -142121491 - AluY SINE Alu -17 294 1 223 148 16 16 chr2 111135202 111135263 -142121320 + A-rich Low_complexity Low_complexity 6 66 0 432 145 0 0 chr2 111135372 111135448 -142121135 - L1PA8 LINE L1 -2243 3903 3828 9980 105 9 0 chr2 111135448 111137703 -142118880 + L1PA8 LINE L1 3896 6170 -2 269 308 160 26 chr2 111138269 111138737 -142117846 + HAL1 LINE L1 1840 2370 -137 838 165 38 0 chr2 111138748 111138906 -142117677 + L1MA5A LINE L1 6122 6285 -12 23 54 0 0 chr2 111140281 111140318 -142116265 + AT_rich Low_complexity Low_complexity 1 37 0 9062 187 8 15 chr2 111141852 111142256 -142114327 - L1PB1 LINE L1 -16 6158 5753 342 67 0 0 chr2 111142256 111142301 -142114282 + (TG)n Simple_repeat Simple_repeat 2 46 0 9062 187 8 15 chr2 111142301 111144686 -142111897 - L1PB1 LINE L1 -421 5753 3417 190 232 161 0 chr2 111145799 111145855 -142110728 + L2 LINE L2 3247 3311 -2 36 0 0 0 chr2 111146046 111146082 -142110501 + AT_rich Low_complexity Low_complexity 1 36 0 697 269 43 5 chr2 111148972 111149180 -142107403 - MIR SINE MIR -14 248 33 28 29 0 0 chr2 111149777 111149812 -142106771 + AT_rich Low_complexity Low_complexity 1 35 0 24 32 0 0 chr2 111149843 111149874 -142106709 + AT_rich Low_complexity Low_complexity 1 31 0 470 241 17 0 chr2 111150371 111150519 -142106064 + FLAM_A SINE Alu 1 150 0 504 223 9 0 chr2 111150581 111150693 -142105890 + L1ME3A LINE L1 6048 6160 -10 212 333 0 11 chr2 111151288 111151375 -142105208 + CT-rich Low_complexity Low_complexity 2 87 0 182 158 0 79 chr2 111151866 111151904 -142104679 + L2 LINE L2 2880 2914 -358 219 250 231 28 chr2 111151972 111152080 -142104503 + MIR SINE MIR 132 261 -1 622 286 6 92 chr2 111152230 111152576 -142104007 + L2 LINE L2 2997 3312 -1 403 314 120 5 chr2 111152673 111152864 -142103719 + MIR SINE MIR 21 233 -29 348 24 0 0 chr2 111152933 111152974 -142103609 + (CA)n Simple_repeat Simple_repeat 2 42 0 2051 257 48 22 chr2 111153113 111153716 -142102867 + MLT1E2 LTR MaLR 5 623 -3 235 188 72 0 chr2 111153718 111153787 -142102796 + L1MB7 LINE L1 6102 6175 -9 520 92 53 0 chr2 111206104 111206180 -142050403 - MADE1 DNA Mariner 0 80 1 768 321 34 0 chr2 111206773 111207010 -142049573 + MIR SINE MIR 12 256 -6 189 0 0 0 chr2 111207741 111207762 -142048821 + (T)n Simple_repeat Simple_repeat 1 21 0 584 239 96 29 chr2 111209920 111210192 -142046391 + LTR33 LTR ERVL 232 521 0 268 341 80 22 chr2 111210337 111210475 -142046108 - MIR SINE MIR 0 262 117 209 206 0 15 chr2 111210851 111210919 -142045664 + GA-rich Low_complexity Low_complexity 2 68 0 1332 294 117 10 chr2 111211504 111211889 -142044694 + L2 LINE L2 1709 2180 -1134 1409 176 65 17 chr2 111211889 111212179 -142044404 - AluJo SINE Alu -8 304 1 1332 294 117 10 chr2 111212179 111212384 -142044199 + L2 LINE L2 2180 2362 -952 2853 58 3 0 chr2 111212408 111212770 -142043813 + L1PA8 LINE L1 5805 6167 -5 5218 157 30 15 chr2 111212770 111213280 -142043303 - L1MA6 LINE L1 -8 6292 5791 315 0 0 0 chr2 111213280 111213315 -142043268 + (TG)n Simple_repeat Simple_repeat 2 36 0 5218 157 30 15 chr2 111213315 111214515 -142042068 - L1MA6 LINE L1 -509 5791 4562 926 348 93 35 chr2 111214541 111215403 -142041180 + L2 LINE L2 2375 3297 -16 366 23 0 0 chr2 111215483 111215526 -142041057 + (TG)n Simple_repeat Simple_repeat 1 43 0 306 0 0 0 chr2 111215536 111215570 -142041013 + (GA)n Simple_repeat Simple_repeat 2 35 0 877 279 7 33 chr2 111215606 111215878 -142040705 + L1MC4 LINE L1 6738 7002 -1040 202 133 44 22 chr2 111217140 111217185 -142039398 + T-rich Low_complexity Low_complexity 5 50 0 318 297 99 0 chr2 111218676 111218767 -142037816 + L2 LINE L2 3202 3301 -12 517 150 35 26 chr2 111219099 111219212 -142037371 - MER58 DNA MER1_type -1 2419 2306 248 286 16 0 chr2 111219661 111219724 -142036859 - MER58 DNA MER1_type -320 66 3 2484 87 0 0 chr2 111220812 111221122 -142035461 + AluSx SINE Alu 3 312 0 304 296 9 9 chr2 111221918 111222026 -142034557 - MIR SINE MIR -5 257 150 268 210 101 42 chr2 111222020 111222139 -142034444 + L2 LINE L2 3188 3313 0 * 277 292 22 34 chr2 111222148 111222237 -142034346 - MIR SINE MIR -134 128 41 2325 91 17 0 chr2 111223412 111223710 -142032873 - AluSx SINE Alu -9 303 1 2070 167 3 3 chr2 111223760 111224108 -142032475 + MER7A DNA MER2_type 1 346 0 249 221 0 0 chr2 111224108 111224176 -142032407 + (TA)n Simple_repeat Simple_repeat 1 68 0 244 239 45 11 chr2 111225008 111225096 -142031487 - L1ME LINE L1 -5979 91 1 270 56 0 0 chr2 111226108 111226144 -142030439 + (CA)n Simple_repeat Simple_repeat 2 37 0 2156 149 13 28 chr2 111226622 111227018 -142029565 + MLT1B LTR MaLR 1 390 0 5211 196 81 52 chr2 111227495 111227851 -142028732 - L1MC3 LINE L1 0 7785 7441 1832 117 0 8 chr2 111227851 111228278 -142028305 - AluSx SINE Alu 0 453 29 5211 196 81 52 chr2 111228278 111229486 -142027097 - L1MC3 LINE L1 -344 7441 6174 319 274 111 20 chr2 111229502 111229633 -142026950 - MIR SINE MIR -63 145 45 1003 222 23 28 chr2 111230134 111230448 -142026135 - MLT2D LTR ERVL -46 474 66 646 238 51 76 chr2 111231204 111231675 -142024908 - L1MC5 LINE L1 -25 7936 7478 951 244 76 79 chr2 111231989 111232060 -142024523 - L1MC5 LINE L1 -737 7224 7154 2018 106 25 3 chr2 111232060 111232343 -142024240 - AluSx SINE Alu -7 305 17 951 244 76 79 chr2 111232343 111232945 -142023638 - L1MC5 LINE L1 -807 7154 6554 362 250 66 13 chr2 111236224 111236376 -142020207 + L1ME4a LINE L1 5725 5884 -237 373 284 204 5 chr2 111237262 111237463 -142019120 - MIR SINE MIR -2 260 20 294 288 128 0 chr2 111238791 111238916 -142017667 + MIR SINE MIR 51 191 -71 972 151 32 6 chr2 111239068 111239351 -142017232 - THE1B LTR MaLR 0 364 1 1616 144 65 0 chr2 111239982 111240277 -142016306 + AluSx SINE Alu 6 317 0 684 231 99 0 chr2 111240663 111240844 -142015739 - MLT1E1 LTR MaLR -5 649 451 1091 211 44 90 chr2 111240844 111241381 -142015202 - MER39 LTR ERV1 0 687 4 720 209 104 52 chr2 111241394 111241643 -142014940 - MLT1E1 LTR MaLR -211 443 182 4818 198 74 78 chr2 111241650 111243329 -142013254 + L1MCa LINE L1 23 1694 -4732 10784 186 48 12 chr2 111243394 111244661 -142011922 + L1PA13 LINE L1 1 1373 -5414 219 69 0 0 chr2 111244661 111244690 -142011893 + (CTG)n Simple_repeat Simple_repeat 1 29 0 10784 186 48 12 chr2 111244690 111245517 -142011066 + L1PA13 LINE L1 1373 2169 -4618 544 172 26 0 chr2 111245533 111245649 -142010934 - L1P LINE L1 -3528 2618 2500 7628 27 1 0 chr2 111245650 111247022 -142009561 + L1PA4 LINE L1 4783 6155 0 5423 257 17 14 chr2 111247024 111248995 -142007588 + L1MCa LINE L1 2350 4326 -2100 395 260 34 1 chr2 111248996 111249155 -142007428 - MLT1E LTR MaLR -455 199 17 270 0 0 0 chr2 111249166 111249196 -142007387 + (TG)n Simple_repeat Simple_repeat 1 30 0 1825 134 51 45 chr2 111249196 111249570 -142007013 - Tigger2a DNA MER2_type -54 380 5 258 32 0 0 chr2 111249581 111249612 -142006971 + (CA)n Simple_repeat Simple_repeat 2 32 0 526 258 36 37 chr2 111249654 111249881 -142006702 - L1MC4a LINE L1 -302 5819 5675 236 270 46 33 chr2 111250372 111250524 -142006059 - L1MC4a LINE L1 -2400 5408 5255 860 325 94 39 chr2 111250733 111251583 -142005000 - L1MC4a LINE L1 -1038 5108 4212 259 239 142 0 chr2 111251679 111251792 -142004791 - MER20B DNA MER1_type -138 645 517 478 187 11 0 chr2 111251880 111251971 -142004612 - MER45 DNA AcHobo -1 1580 1489 * 1932 328 10 3 chr2 111251969 111252643 -142003940 - MER45C DNA AcHobo -271 682 4 1178 282 51 7 chr2 111252672 111253083 -142003500 + MER20B DNA MER1_type 26 454 -329 427 216 15 60 chr2 111253261 111253460 -142003123 + MER20B DNA MER1_type 526 715 -68 445 246 101 40 chr2 111253481 111253758 -142002825 - L1MC4a LINE L1 -2056 4090 3797 2397 97 3 0 chr2 111254903 111255213 -142001370 + AluSx SINE Alu 1 311 -1 476 246 128 42 chr2 111255343 111255656 -142000927 - L1MC4 LINE L1 -147 7895 7556 21 0 0 0 chr2 111256358 111256379 -142000204 + AT_rich Low_complexity Low_complexity 1 21 0 2169 112 3 0 chr2 111257033 111257319 -141999264 + AluSp SINE Alu 1 287 -26 300 333 39 16 chr2 111257413 111257542 -141999041 - L2 LINE L2 0 3313 3182 208 303 134 42 chr2 111257783 111257925 -141998658 + L2 LINE L2 3159 3313 0 249 270 43 26 chr2 111258085 111258200 -141998383 - MARNA DNA Mariner -94 492 376 234 333 14 0 chr2 111258289 111258358 -141998225 + L2 LINE L2 3239 3308 -5 287 225 56 11 chr2 111258380 111258469 -141998114 - MARNA DNA Mariner -345 241 149 1981 144 94 32 chr2 111258503 111258906 -141997677 - MSTA LTR MaLR 0 428 1 196 203 188 14 chr2 111259374 111259443 -141997140 + L2 LINE L2 2456 2536 -778 23 33 0 0 chr2 111259968 111259998 -141996585 + AT_rich Low_complexity Low_complexity 1 30 0 191 271 17 17 chr2 111260535 111260594 -141995989 + L2 LINE L2 3239 3297 -16 345 194 65 58 chr2 111262434 111262573 -141994010 - LTR16A1 LTR ERVL -160 297 158 689 321 169 44 chr2 111262773 111263442 -141993141 - L3 LINE CR1 -384 1193 402 2165 131 3 0 chr2 111263442 111263747 -141992836 + AluSx SINE Alu 1 306 -6 689 321 169 44 chr2 111263747 111263893 -141992690 - L3 LINE CR1 -1175 402 276 1183 199 84 11 chr2 111263966 111264322 -141992261 - LTR48 LTR ERV1 -57 730 349 350 181 12 24 chr2 111264333 111264416 -141992167 - LTR49 LTR ERV1 -448 147 66 3610 152 67 77 chr2 111264421 111265065 -141991518 - LTR49-int LTR ERV1 -8 6323 5674 938 17 17 0 chr2 111265065 111265180 -141991403 + L1PA4 LINE L1 6037 6153 -2 3610 152 67 77 chr2 111265180 111265313 -141991270 - LTR49-int LTR ERV1 -657 5674 5541 192 77 0 0 chr2 111265313 111265339 -141991244 + (TA)n Simple_repeat Simple_repeat 2 27 0 3610 152 67 77 chr2 111265339 111265516 -141991067 - LTR49-int LTR ERV1 -790 5541 5378 522 233 26 9 chr2 111265516 111265632 -141990951 + FLAM_C SINE Alu 1 118 -25 6070 174 39 53 chr2 111265653 111267068 -141989515 - LTR49-int LTR ERV1 -946 5385 3993 2340 89 3 3 chr2 111267068 111267372 -141989211 + AluSc SINE Alu 1 304 -5 6070 174 39 53 chr2 111267372 111267515 -141989068 - LTR49-int LTR ERV1 -2338 3993 3849 644 159 116 27 chr2 111267515 111267661 -141988922 - LTR49-int LTR ERV1 -271 1515 1358 180 0 0 0 chr2 111267670 111267690 -141988893 + (TATATG)n Simple_repeat Simple_repeat 4 23 0 1256 238 19 3 chr2 111267690 111267997 -141988586 - LTR48-int LTR ERV1 -4228 2103 1792 270 284 30 0 chr2 111268894 111268961 -141987622 - tRNA-Glu-GAG tRNA tRNA 0 75 7 431 228 117 33 chr2 111268980 111269160 -141987423 - LTR48-int LTR ERV1 -5138 1193 999 21 36 0 0 chr2 111269163 111269191 -141987392 + AT_rich Low_complexity Low_complexity 1 28 0 296 272 34 92 chr2 111269232 111269438 -141987145 - LTR48-int LTR ERV1 -6137 194 1 998 212 85 63 chr2 111269459 111270081 -141986502 - LTR48 LTR ERV1 -33 754 1 2089 170 101 24 chr2 111270370 111270452 -141986131 - MER34C LTR ERV1 0 585 511 4242 167 27 48 chr2 111270452 111271374 -141985209 - MER4D LTR ERV1 0 903 1 2089 170 101 24 chr2 111271374 111271797 -141984786 - MER34C LTR ERV1 -74 511 41 1720 219 20 5 chr2 111271888 111272285 -141984298 + MER57A LTR ERV1 1 403 0 2789 207 12 80 chr2 111272287 111272665 -141983918 + MER57A-int LTR ERV1 3 405 -7132 2134 111 3 7 chr2 111272665 111273024 -141983559 + AluSx SINE Alu 1 312 0 2789 207 12 80 chr2 111273024 111273191 -141983392 + MER57A-int LTR ERV1 405 484 -7053 2964 167 9 73 chr2 111273191 111273714 -141982869 + LTR9 LTR ERV1 1 475 -137 2170 140 0 0 chr2 111273714 111274021 -141982562 - AluSx SINE Alu 0 312 6 2964 167 9 73 chr2 111274021 111274151 -141982432 + LTR9 LTR ERV1 475 612 0 2789 207 12 80 chr2 111274151 111274371 -141982212 + MER57A-int LTR ERV1 484 717 -6820 3610 188 0 15 chr2 111274385 111275120 -141981463 + MER57A-int LTR ERV1 5098 5821 -1716 5917 211 17 15 chr2 111275448 111276740 -141979843 + MER57A-int LTR ERV1 5824 7118 -419 564 195 34 27 chr2 111276743 111276892 -141979691 + LTR54B LTR ERV1 1 150 -348 426 175 0 21 chr2 111276931 111277028 -141979555 + MER57A-int LTR ERV1 7443 7537 0 1704 234 15 5 chr2 111277030 111277427 -141979156 + MER57A LTR ERV1 3 403 0 2198 68 7 52 chr2 111277871 111278180 -141978403 - AluY SINE Alu 0 311 17 249 299 13 0 chr2 111278585 111278662 -141977921 + MIR SINE MIR 179 256 -6 22 0 0 0 chr2 111278663 111278685 -141977898 + AT_rich Low_complexity Low_complexity 1 22 0 226 286 0 18 chr2 111279211 111279267 -141977316 - MER5C DNA MER1_type -269 55 1 21 57 0 0 chr2 111279886 111279921 -141976662 + AT_rich Low_complexity Low_complexity 1 35 0 470 298 29 34 chr2 111280436 111280644 -141975939 - L1ME3A LINE L1 -62 6108 5902 1792 202 3 6 chr2 111280647 111281004 -141975579 - MLT1A1 LTR MaLR 0 365 10 294 128 20 69 chr2 111281026 111281128 -141975455 + (TTTA)n Simple_repeat Simple_repeat 3 99 0 425 285 101 21 chr2 111281141 111281429 -141975154 - L1MEc LINE L1 -1818 5123 4813 205 211 0 22 chr2 111281432 111281522 -141975061 + (TA)n Simple_repeat Simple_repeat 1 88 0 314 280 0 43 chr2 111281524 111281617 -141974966 + L1MC4 LINE L1 6615 6703 -1339 * 320 195 46 46 chr2 111281565 111281652 -141974931 - L1MC4 LINE L1 -1339 6703 6617 238 172 0 35 chr2 111281682 111281740 -141974843 + (TA)n Simple_repeat Simple_repeat 2 57 0 995 277 90 64 chr2 111281772 111281925 -141974658 - L1MEc LINE L1 -2222 4719 4571 2194 148 120 5 chr2 111281925 111282309 -141974274 + MSTA LTR MaLR 1 428 0 995 277 90 64 chr2 111282309 111283711 -141972872 - L1MEc LINE L1 -2370 4571 3124 772 261 88 64 chr2 111283713 111284245 -141972338 + MER41C LTR ERV1 1 545 -9 285 29 0 0 chr2 111284371 111284405 -141972178 + (TG)n Simple_repeat Simple_repeat 2 35 0 1439 231 28 32 chr2 111284537 111284990 -141971593 + LTR56 LTR ERV1 12 437 0 488 236 69 7 chr2 111284992 111285136 -141971447 - L1ME3A LINE L1 -34 6136 5984 5353 125 28 2 chr2 111285817 111286861 -141969722 - L1PB2 LINE L1 -2 6149 5069 1780 239 45 10 chr2 111286883 111287394 -141969189 - L1PBa LINE L1 -6328 535 7 382 309 50 22 chr2 111287437 111287618 -141968965 - L1MEc LINE L1 -4159 2963 2778 721 295 50 42 chr2 111287775 111288320 -141968263 - L1MEc LINE L1 -4594 2528 1980 21 36 0 0 chr2 111288438 111288466 -141968117 + AT_rich Low_complexity Low_complexity 1 28 0 272 298 21 11 chr2 111288516 111288704 -141967879 - L1MEc LINE L1 -4954 1469 1280 1106 203 157 35 chr2 111288970 111289231 -141967352 - AluJb SINE Alu -9 293 1 6152 232 58 12 chr2 111289534 111291470 -141965113 + L1MB2 LINE L1 2530 4554 -1592 9052 149 35 6 chr2 111291483 111293069 -141963514 + L1PA8 LINE L1 10 1641 -4820 14194 111 6 3 chr2 111293074 111296028 -141960555 + L1PA8 LINE L1 3520 6487 0 4102 211 24 25 chr2 111296044 111297682 -141958901 + L1MB2 LINE L1 4532 6170 -1 305 307 205 0 chr2 111298303 111298430 -141958153 + MER91A DNA MER1_type 44 196 0 209 224 20 0 chr2 111299066 111299115 -141957468 + (TTCA)n Simple_repeat Simple_repeat 3 52 0 238 152 22 0 chr2 111299122 111299168 -141957415 + MLT1E1 LTR MaLR 1 47 -607 1083 220 55 84 chr2 111299177 111299559 -141957024 + MLT1E1 LTR MaLR 278 648 -6 2106 132 3 0 chr2 111300714 111301018 -141955565 - AluSq SINE Alu -8 305 1 311 325 28 32 chr2 111305113 111305385 -141951198 - L1M3a LINE L1 -5226 729 280 1227 325 4 15 chr2 111305640 111306096 -141950487 - L1M3a LINE L1 -5503 452 2 7758 218 41 12 chr2 111306419 111309794 -141946789 - L1MC1 LINE L1 -52 6281 2804 21 57 0 0 chr2 111310462 111310497 -141946086 + AT_rich Low_complexity Low_complexity 1 35 0 183 100 0 0 chr2 111310556 111310586 -141945997 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 882 253 67 12 chr2 111310761 111311165 -141945418 - MER114 LTR ERV 0 648 223 761 173 93 0 chr2 111311199 111311349 -141945234 + AluJb SINE Alu 136 299 -13 582 203 33 13 chr2 111311375 111311528 -141945055 - MER114 LTR ERV -492 156 1 359 236 75 38 chr2 111313078 111313184 -141943399 - MIR SINE MIR -88 174 65 221 216 20 0 chr2 111313788 111313839 -141942744 + A-rich Low_complexity Low_complexity 4 55 0 213 193 35 18 chr2 111315011 111315068 -141941515 + GA-rich Low_complexity Low_complexity 5 62 0 1977 198 26 67 chr2 111315361 111315942 -141940641 - MER74A LTR ERVL -1 557 1 212 207 190 0 chr2 111316170 111316228 -141940355 - L2 LINE L2 -1 3271 3203 1022 293 137 8 chr2 111316233 111316701 -141939882 + MLT1H LTR MaLR 6 533 -16 3033 108 5 2 chr2 111316969 111317414 -141939169 - MLT2A2 LTR ERVL -7 446 1 372 133 0 0 chr2 111317489 111317549 -141939034 + (TG)n Simple_repeat Simple_repeat 1 60 0 288 270 36 63 chr2 111317574 111317685 -141938898 - L2 LINE L2 -508 2806 2699 433 299 36 36 chr2 111318663 111318830 -141937753 - MIR SINE MIR -76 186 20 775 283 50 17 chr2 111319187 111319487 -141937096 + MLT1J LTR MaLR 28 337 -174 253 372 22 15 chr2 111320294 111320431 -141936152 + MIR SINE MIR 15 152 -110 2284 91 0 3 chr2 111321600 111321897 -141934686 + AluSc SINE Alu 1 296 -13 636 228 14 81 chr2 111322527 111322738 -141933845 - MER20 DNA MER1_type -3 216 20 780 295 56 83 chr2 111323033 111323775 -141932808 - L2 LINE L2 -2 3311 2583 1293 216 19 38 chr2 111324235 111324605 -141931978 - MLT1A1 LTR MaLR 0 365 3 441 99 0 0 chr2 111325052 111325123 -141931460 + L1MA1 LINE L1 6230 6300 -2 313 279 16 8 chr2 111326021 111326150 -141930433 + LTR33 LTR ERVL 380 509 -12 186 244 0 0 chr2 111326612 111326653 -141929930 + MIR3 SINE MIR 157 197 -11 1026 262 56 74 chr2 111326821 111326905 -141929678 - L1MDa LINE L1 -2472 4068 3984 318 50 0 0 chr2 111326912 111326952 -141929631 + (TG)n Simple_repeat Simple_repeat 1 40 0 1980 132 3 3 chr2 111326952 111327232 -141929351 - AluSp SINE Alu -30 283 1 1026 262 56 74 chr2 111327232 111327503 -141929080 - L1MDa LINE L1 -2556 3984 3710 199 0 0 0 chr2 111327503 111327525 -141929058 + (TTTA)n Simple_repeat Simple_repeat 2 172 0 1398 206 0 44 chr2 111327525 111327821 -141928762 - AluJo SINE Alu -1 305 2 1026 262 56 74 chr2 111327821 111328032 -141928551 - L1MDa LINE L1 -2829 3711 3498 1988 134 44 16 chr2 111328032 111328397 -141928186 + THE1C LTR MaLR 1 375 0 1026 262 56 74 chr2 111328397 111329139 -141927444 - L1MDa LINE L1 -3042 3498 2753 439 267 26 67 chr2 111329280 111329475 -141927108 - L1MDa LINE L1 -3961 2579 2393 225 208 0 19 chr2 111329782 111329835 -141926748 + T-rich Low_complexity Low_complexity 3 54 0 1304 242 49 75 chr2 111329841 111330490 -141926093 - L1MC4 LINE L1 0 8042 7411 553 159 28 62 chr2 111330553 111330698 -141925885 - L1MC4a LINE L1 -495 7313 7174 321 331 103 6 chr2 111330719 111330894 -141925689 + L1MEc LINE L1 1510 1701 -4695 34 65 0 0 chr2 111330901 111330963 -141925620 + AT_rich Low_complexity Low_complexity 1 62 0 236 268 18 0 chr2 111331763 111331830 -141924753 + L3 LINE CR1 1514 1581 -2 459 297 31 36 chr2 111334290 111334482 -141922101 + MIR SINE MIR 21 211 -51 258 267 113 60 chr2 111334894 111335044 -141921539 + MIR SINE MIR 92 249 -13 592 245 97 5 chr2 111335177 111335373 -141921210 - LTR33A LTR ERVL -23 500 287 * 886 277 88 16 chr2 111335367 111335732 -141920851 - LTR33A LTR ERVL -131 392 2 347 256 116 39 chr2 111335948 111336077 -141920506 - MIR SINE MIR -104 158 20 724 324 61 25 chr2 111337106 111337433 -141919150 - L2 LINE L2 -15 3298 2960 232 246 229 33 chr2 111338430 111338552 -141918031 + MIR3 SINE MIR 18 163 -45 1476 222 75 45 chr2 111338836 111339367 -141917216 - L1MDa LINE L1 -5851 689 143 547 262 29 29 chr2 111339429 111339601 -141916982 - MER5B DNA MER1_type -6 172 1 976 191 11 0 chr2 111340229 111340417 -141916166 + MER3 DNA MER1_type 20 209 0 1094 234 94 6 chr2 111342275 111342625 -141913958 - MER63 DNA MER1_type -1 1061 681 248 295 8 74 chr2 111344454 111344576 -141912007 + MIR SINE MIR 34 147 -61 213 214 0 54 chr2 111346041 111346097 -141910486 + (CA)n Simple_repeat Simple_repeat 1 53 0 2229 111 3 0 chr2 111346155 111346453 -141910130 + AluSp SINE Alu 3 301 -12 1499 281 118 14 chr2 111346874 111347604 -141908979 - L1ME3A LINE L1 0 6170 5365 473 279 124 39 chr2 111347610 111347764 -141908819 - L1ME3A LINE L1 -845 5301 5162 1492 186 17 34 chr2 111347764 111348060 -141908523 - AluJo SINE Alu -1 311 21 473 279 124 39 chr2 111348060 111348292 -141908291 - L1ME3A LINE L1 -984 5162 4882 306 297 18 9 chr2 111348850 111348961 -141907622 - LTR16A LTR ERVL -207 243 132 239 396 0 10 chr2 111349920 111350021 -141906562 - MIR SINE MIR -162 100 1 483 202 0 0 chr2 111350044 111350173 -141906410 + (CA)n Simple_repeat Simple_repeat 2 130 0 40661 51 3 2 chr2 111350264 111356416 -141900167 - L1PA4 LINE L1 0 6155 1 745 273 25 7 chr2 111356755 111357041 -141899542 - L1ME4a LINE L1 -234 5887 5597 22 35 0 0 chr2 111357475 111357504 -141899079 + AT_rich Low_complexity Low_complexity 1 29 0 913 216 33 0 chr2 111357925 111358138 -141898445 + MER34 LTR ERV1 7 226 -316 1983 85 12 100 chr2 111408323 111408653 -141847930 - AluSq SINE Alu -12 301 1 1409 113 61 39 chr2 111409014 111409245 -141847338 - AluSg/x SINE Alu -6 306 71 1657 141 34 0 chr2 111410119 111410388 -141846195 - MER66B LTR ERV1 0 486 209 2592 64 12 0 chr2 111410490 111410832 -141845751 - L1P LINE L1 -1681 4465 4120 * 6246 33 0 0 chr2 111410828 111411595 -141844988 + L1P LINE L1 2260 3026 -3120 1913 134 3 24 chr2 111411980 111412310 -141844273 - AluSx SINE Alu 0 324 1 293 270 141 31 chr2 111412541 111412704 -141843879 - MER5A DNA MER1_type 0 189 9 26 0 0 0 chr2 111414920 111414946 -141841637 + AT_rich Low_complexity Low_complexity 1 26 0 2259 104 0 3 chr2 111415126 111415423 -141841160 + AluSx SINE Alu 1 296 -16 24 0 0 0 chr2 111415807 111415831 -141840752 + AT_rich Low_complexity Low_complexity 1 24 0 33 0 0 0 chr2 111416137 111416170 -141840413 + AT_rich Low_complexity Low_complexity 1 33 0 649 236 35 0 chr2 111416190 111416364 -141840219 - L1PA16 LINE L1 -1517 4629 4450 5134 139 33 10 chr2 111416364 111417144 -141839439 + L1PA16 LINE L1 4611 5372 -794 2203 121 3 0 chr2 111417144 111417451 -141839132 + AluSq SINE Alu 1 308 -5 5134 139 33 10 chr2 111417451 111418197 -141838386 + L1PA16 LINE L1 5372 6162 -4 2243 85 0 4 chr2 111418273 111418575 -141838008 + AluSg SINE Alu 1 301 0 5427 177 20 16 chr2 111418684 111420663 -141835920 - L1MA6 LINE L1 0 6300 4314 554 243 44 59 chr2 111420781 111421053 -141835530 - L1MC4a LINE L1 -1840 5968 5701 1027 240 19 54 chr2 111421223 111421538 -141835045 + MLT2B1 LTR ERVL 3 405 -115 8655 195 36 24 chr2 111422376 111424303 -141832280 + L1MC3 LINE L1 5553 7503 -282 4172 169 7 30 chr2 111424338 111425068 -141831515 + MER54B LTR ERVL 81 793 0 1408 158 40 4 chr2 111425068 111425346 -141831237 + L1MC3 LINE L1 7498 7785 0 253 205 115 8 chr2 111425365 111425487 -141831096 + L1MC/D LINE L1 5297 5431 -2377 2221 226 102 0 chr2 111425552 111426025 -141830558 + MLT1F1 LTR MaLR 2 522 -45 231 333 0 0 chr2 111426025 111426103 -141830480 + GA-rich Low_complexity Low_complexity 3 80 0 21 36 0 0 chr2 111426691 111426719 -141829864 + AT_rich Low_complexity Low_complexity 1 28 0 29 28 0 0 chr2 111427511 111427547 -141829036 + AT_rich Low_complexity Low_complexity 1 36 0 420 234 63 9 chr2 111428715 111428826 -141827757 - MIR SINE MIR -21 241 125 189 171 0 0 chr2 111429176 111429211 -141827372 + GA-rich Low_complexity Low_complexity 4 38 0 216 288 34 0 chr2 111429224 111429261 -141827322 - L2 LINE L2 -16 3256 3215 3229 120 16 4 chr2 111429261 111429752 -141826831 + LOR1a LTR ERV1 1 497 0 216 288 34 0 chr2 111429752 111429773 -141826810 - L2 LINE L2 -57 3215 3196 * 219 316 71 0 chr2 111429771 111429869 -141826714 - MIR SINE MIR -112 150 46 192 333 194 0 chr2 111430296 111430404 -141826179 + L2 LINE L2 2932 3060 -212 305 281 80 23 chr2 111430612 111430954 -141825629 - LTR16C LTR ERVL -10 481 79 276 315 63 47 chr2 111431095 111431222 -141825361 + L2 LINE L2 3185 3313 0 229 116 105 23 chr2 111431565 111431651 -141824932 + (TCTA)n Simple_repeat Simple_repeat 4 96 0 322 290 42 2 chr2 111431758 111431885 -141824698 - MIR SINE MIR -68 140 6 280 272 8 16 chr2 111433026 111433151 -141823432 - L1M4 LINE L1 -3010 3136 3013 250 360 12 0 chr2 111433418 111433504 -141823079 + MER91B DNA MER1_type 5 91 -99 451 133 41 20 chr2 111433505 111433603 -141822980 + MLT1A1 LTR MaLR 1 100 -265 668 175 0 8 chr2 111433625 111433745 -141822838 + MLT1A1 LTR MaLR 246 364 -1 229 275 29 0 chr2 111433745 111433814 -141822769 + MER91B DNA MER1_type 89 159 -31 279 0 0 0 chr2 111434737 111434768 -141821815 + (CA)n Simple_repeat Simple_repeat 2 32 0 213 175 12 125 chr2 111434956 111435036 -141821547 - MIR SINE MIR -70 192 122 591 223 160 67 chr2 111436201 111436331 -141820252 + MSTD LTR MaLR 1 117 -279 2557 110 3 0 chr2 111436331 111436694 -141819889 + THE1B LTR MaLR 1 364 0 591 223 160 67 chr2 111436694 111436914 -141819669 + MSTD LTR MaLR 117 396 0 1601 182 42 72 chr2 111437697 111438099 -141818484 + MLT1B LTR MaLR 1 390 0 374 248 39 16 chr2 111438223 111438352 -141818231 + MER94 DNA DNA 1 132 -2 301 230 65 88 chr2 111438417 111438634 -141817949 - L1MC5 LINE L1 -490 7471 7260 2098 117 13 16 chr2 111438663 111438971 -141817612 + AluSq SINE Alu 1 307 -6 994 241 69 59 chr2 111439068 111439578 -141817005 - L1MC5 LINE L1 -728 7233 6719 4773 156 25 35 chr2 111439581 111440207 -141816376 + Tigger3b DNA MER2_type 1 615 -2413 2111 119 6 6 chr2 111440207 111440518 -141816065 + AluY SINE Alu 1 311 0 4773 156 25 35 chr2 111440518 111440827 -141815756 + Tigger3b DNA MER2_type 615 926 -305 6014 114 163 34 chr2 111440837 111442212 -141814371 + pTR5 LTR ERV1 276 2295 -143 1593 153 37 14 chr2 111442215 111442509 -141814074 + Tigger3b DNA MER2_type 931 1231 0 300 318 205 13 chr2 111442802 111442953 -141813630 - L1MC5 LINE L1 -2199 5609 5430 356 218 30 10 chr2 111442953 111443054 -141813529 + Charlie4 DNA MER1_type 1822 1924 -37 318 179 54 9 chr2 111443218 111443330 -141813253 - L1MC5 LINE L1 -2401 5407 5291 23 33 0 0 chr2 111443395 111443425 -141813158 + AT_rich Low_complexity Low_complexity 1 30 0 431 292 52 102 chr2 111443496 111443895 -141812688 - L1MC5 LINE L1 -1015 5131 4770 2092 65 0 0 chr2 111443895 111444157 -141812426 - AluY SINE Alu -11 300 39 431 292 52 102 chr2 111444157 111444356 -141812227 - L1MC5 LINE L1 -1376 4770 4563 667 287 82 50 chr2 111444407 111445208 -141811375 - HAL1b LINE L1 -6 1342 516 293 226 12 12 chr2 111445233 111445317 -141811266 - MLT1I LTR MaLR -7 402 319 335 202 0 11 chr2 111445864 111445953 -141810630 - L1MA10 LINE L1 0 6334 6247 280 212 35 0 chr2 111446333 111446418 -141810165 + CT-rich Low_complexity Low_complexity 3 90 0 417 318 37 48 chr2 111447165 111447354 -141809229 + MER5A DNA MER1_type 3 189 0 2010 274 79 28 chr2 111448374 111448501 -141808082 + L1MEc LINE L1 2004 2123 -4092 195 42 0 0 chr2 111448501 111448525 -141808058 + (CCA)n Simple_repeat Simple_repeat 1 24 0 2010 274 79 28 chr2 111448525 111448807 -141807776 + L1MEc LINE L1 2123 2389 -3826 784 121 8 0 chr2 111448807 111448931 -141807652 + L1PB1 LINE L1 6026 6150 -1 2010 274 79 28 chr2 111448931 111450347 -141806236 + L1MEc LINE L1 2389 3954 -2261 1596 208 0 31 chr2 111450545 111450863 -141805720 - AluJo SINE Alu -4 308 1 205 374 97 35 chr2 111453608 111453865 -141802718 - L2 LINE L2 -1 3271 2999 2027 143 7 7 chr2 111453892 111454186 -141802397 + AluSx SINE Alu 3 296 -16 183 80 0 0 chr2 111454683 111454708 -141801875 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 943 177 6 0 chr2 111454709 111454867 -141801716 - FAM SINE Alu -21 164 6 24 32 0 0 chr2 111456137 111456168 -141800415 + AT_rich Low_complexity Low_complexity 1 31 0 319 225 0 28 chr2 111456199 111456270 -141800313 + Tigger2 DNA MER2_type 1 69 -2649 * 2415 161 28 5 chr2 111456260 111456696 -141799887 + Tigger2 DNA MER2_type 2273 2718 0 261 330 54 49 chr2 111456711 111456896 -141799687 - MIR SINE MIR -57 205 20 338 219 35 26 chr2 111458118 111458232 -141798351 + L1MEd LINE L1 895 1009 -5110 211 227 62 136 chr2 111458535 111458711 -141797872 - MER5B DNA MER1_type -9 169 7 242 200 19 19 chr2 111459940 111460045 -141796538 + CT-rich Low_complexity Low_complexity 2 106 0 356 244 81 24 chr2 111460453 111460576 -141796007 - MER94 DNA DNA 0 134 5 22 0 0 0 chr2 111461205 111461227 -141795356 + AT_rich Low_complexity Low_complexity 1 22 0 597 204 234 30 chr2 111462543 111462812 -141793771 + MER5C DNA MER1_type 1 324 0 326 299 52 41 chr2 111463964 111464158 -141792425 - L2 LINE L2 0 3313 3118 276 260 13 52 chr2 111464313 111464390 -141792193 + MER5B DNA MER1_type 46 111 -67 1344 109 0 0 chr2 111464390 111464564 -141792019 + AluSg/x SINE Alu 126 299 -13 259 297 0 0 chr2 111465440 111465504 -141791079 + L2 LINE L2 2986 3049 -223 365 274 94 134 chr2 111465939 111466363 -141790220 - L2 LINE L2 -21 3251 2845 280 302 84 71 chr2 111466374 111466755 -141789828 - L2 LINE L2 -576 2738 2353 23 54 0 0 chr2 111467304 111467341 -141789242 + AT_rich Low_complexity Low_complexity 1 37 0 1411 213 58 22 chr2 111468033 111468394 -141788189 - MLT1A2 LTR MaLR 0 374 1 1209 143 4 29 chr2 111469268 111469496 -141787087 + L1MA7 LINE L1 6052 6275 -16 1533 103 175 103 chr2 111469496 111469845 -141786738 - THE1C LTR MaLR 0 375 2 1209 143 4 29 chr2 111469845 111469861 -141786722 + L1MA7 LINE L1 6275 6290 -1 554 286 132 36 chr2 111469879 111470463 -141786120 - L1MC4 LINE L1 -40 8002 7363 188 245 0 20 chr2 111470905 111470954 -141785629 + MIR SINE MIR 128 175 -87 1792 233 60 5 chr2 111473387 111473804 -141782779 - MLT2B1 LTR ERVL -80 440 1 10156 175 42 10 chr2 111473804 111474672 -141781911 - ERVL-B1 LTR ERVL -7 5757 4918 1580 212 19 56 chr2 111474672 111475083 -141781500 - MSTD LTR MaLR 0 396 1 10156 175 42 10 chr2 111475083 111475492 -141781091 - ERVL-B1 LTR ERVL -846 4918 4523 2805 93 0 0 chr2 111475492 111475856 -141780727 + THE1B LTR MaLR 1 364 0 10156 175 42 10 chr2 111475856 111476589 -141779994 - ERVL-B1 LTR ERVL -1241 4523 3682 248 388 62 0 chr2 111476629 111476789 -141779794 + MLT1K LTR MaLR 184 353 -235 396 287 107 69 chr2 111476970 111477150 -141779433 + HAL1 LINE L1 1390 1562 -945 1979 154 0 0 chr2 111477150 111477442 -141779141 + AluSx SINE Alu 3 294 -18 396 287 107 69 chr2 111477442 111477756 -141778827 + HAL1 LINE L1 1562 1903 -604 1340 89 0 0 chr2 111478334 111478502 -141778081 + AluSg/x SINE Alu 141 308 -4 322 218 30 0 chr2 111478630 111478731 -141777852 + HAL1 LINE L1 2282 2385 -122 340 213 0 0 chr2 111478861 111478922 -141777661 + FRAM/FAM SINE Alu 1 55 -111 247 217 0 0 chr2 111478903 111478949 -141777634 + Alu SINE Alu 70 115 -18 * 216 0 0 0 chr2 111479485 111479509 -141777074 + (TG)n Simple_repeat Simple_repeat 1 24 0 466 135 0 0 chr2 111480061 111480135 -141776448 + MADE1 DNA Mariner 6 79 -1 312 325 65 26 chr2 111480407 111480561 -141776022 - L3 LINE CR1 -1093 484 325 1049 16 0 0 chr2 111481616 111481737 -141774846 + L1PA2 LINE L1 6033 6153 -2 21 0 0 0 chr2 111481926 111481947 -141774636 + AT_rich Low_complexity Low_complexity 1 21 0 2057 123 0 0 chr2 111482071 111482386 -141774197 - AluSx SINE Alu 0 315 1 311 296 8 64 chr2 111482692 111482817 -141773766 - MER103 DNA DNA -48 118 1 25 31 0 0 chr2 111483962 111483994 -141772589 + AT_rich Low_complexity Low_complexity 1 32 0 1418 52 0 0 chr2 111484007 111484180 -141772403 - L1P3 LINE L1 -407 5747 5575 264 53 0 0 chr2 111484179 111484217 -141772366 + L1PA7 LINE L1 6117 6154 0 * 524 238 33 0 chr2 111484214 111484336 -141772247 - L1MB7 LINE L1 -43 6141 6016 * 1723 246 76 31 chr2 111484335 111485287 -141771296 - L1M4 LINE L1 -3839 2543 1542 34 72 0 0 chr2 111486049 111486118 -141770465 + AT_rich Low_complexity Low_complexity 1 69 0 289 191 36 42 chr2 111486122 111486290 -141770293 + (TTATA)n Simple_repeat Simple_repeat 1 167 0 * 318 132 19 75 chr2 111486168 111486327 -141770256 + (TAA)n Simple_repeat Simple_repeat 1 150 0 1000 198 163 92 chr2 111486547 111486915 -141769668 + MSTD LTR MaLR 1 394 -2 3612 246 113 84 chr2 111486923 111488539 -141768044 + MSTD-int LTR MaLR 15 1730 -5 1092 279 133 0 chr2 111488546 111488893 -141767690 + MSTD LTR MaLR 3 395 -1 376 245 77 14 chr2 111490166 111490309 -141766274 - LTR41 LTR ERVL -600 173 22 542 207 0 58 chr2 111490318 111490439 -141766144 - AluJo SINE Alu -124 188 75 236 317 49 0 chr2 111490466 111490548 -141766035 - MIR SINE MIR -113 149 64 1605 196 3 34 chr2 111492305 111492627 -141763956 + AluJo SINE Alu 1 312 0 512 42 0 28 chr2 111493950 111494022 -141762561 + (GGAA)n Simple_repeat Simple_repeat 4 73 0 25 31 0 0 chr2 111494465 111494497 -141762086 + AT_rich Low_complexity Low_complexity 1 32 0 1664 286 62 43 chr2 111494628 111495237 -141761346 + L1MCb LINE L1 3 632 -5413 2223 134 111 3 chr2 111495237 111495626 -141760957 - MSTB1 LTR MaLR -1 431 1 1664 286 62 43 chr2 111495626 111495791 -141760792 + L1MCb LINE L1 632 792 -5253 2225 76 31 10 chr2 111495793 111496084 -141760499 + AluY SINE Alu 1 297 -14 2476 268 30 50 chr2 111496146 111497477 -141759106 + L1MCb LINE L1 2220 3665 -2899 294 29 0 0 chr2 111497477 111497512 -141759071 + (TCTA)n Simple_repeat Simple_repeat 2 36 0 2476 268 30 50 chr2 111497512 111497692 -141758891 + L1MCb LINE L1 3665 3847 -2717 21 100 0 0 chr2 111497746 111497816 -141758767 + AT_rich Low_complexity Low_complexity 1 70 0 3620 103 17 24 chr2 111497902 111498435 -141758148 - MER1A DNA MER1_type 0 529 1 1095 249 27 14 chr2 111498444 111498809 -141757774 + L1MCb LINE L1 4010 4379 -2185 262 171 0 0 chr2 111498816 111498857 -141757726 + Alu SINE Alu 5 45 -258 2077 137 0 37 chr2 111499715 111500037 -141756546 - AluSx SINE Alu 0 312 3 22 56 0 0 chr2 111501495 111501531 -141755052 + AT_rich Low_complexity Low_complexity 1 36 0 1022 261 114 36 chr2 111502713 111503808 -141752775 - L1ME3A LINE L1 0 6170 4957 865 152 55 6 chr2 111503817 111503982 -141752601 - L1MC2 LINE L1 0 6344 6172 1951 292 30 0 chr2 111504203 111504710 -141751873 + L1PA13 LINE L1 53 574 -6265 2870 227 6 0 chr2 111504752 111505398 -141751185 + L1PA13 LINE L1 2314 2963 -3886 7340 155 9 9 chr2 111505402 111506671 -141749912 - Tigger1 DNA MER2_type -98 2320 1052 2508 64 0 0 chr2 111506906 111507204 -141749379 - AluY SINE Alu -13 298 1 288 380 25 8 chr2 111507999 111508120 -141748463 - MIR3 SINE MIR -84 124 2 357 301 12 38 chr2 111509472 111509639 -141746944 + MER21B LTR ERV1 1 201 -404 * 1192 286 85 16 chr2 111509608 111510220 -141746363 + MER21B LTR ERV1 98 800 -63 204 218 90 113 chr2 111511131 111511264 -141745319 + L2 LINE L2 2955 3084 -188 693 193 0 7 chr2 111511499 111511634 -141744949 - FRAM SINE Alu -9 167 34 2152 126 7 0 chr2 111512150 111512460 -141744123 + AluSq SINE Alu 1 312 -1 1631 338 134 36 chr2 111512487 111514055 -141742528 + L2 LINE L2 1417 3133 -180 2148 110 20 3 chr2 111514448 111514747 -141741836 + AluSx SINE Alu 1 304 -8 318 286 76 25 chr2 111516705 111516824 -141739759 + L2 LINE L2 3181 3305 -8 1113 219 9 9 chr2 111516860 111517093 -141739490 + AluJo SINE Alu 1 233 -79 3883 110 18 180 chr2 111517097 111518604 -141737979 - pTR5 LTR ERV1 -4 2602 1524 204 97 0 0 chr2 111518908 111518939 -141737644 + (CA)n Simple_repeat Simple_repeat 2 32 0 1524 302 227 12 chr2 111518953 111519933 -141736650 - L2 LINE L2 -189 3124 1924 243 309 0 0 chr2 111519967 111520048 -141736535 - L1MC4 LINE L1 -60 7982 7902 3392 242 84 19 chr2 111520066 111521146 -141735437 - L1MC4 LINE L1 -120 7922 6773 517 234 152 22 chr2 111521147 111521416 -141735167 - L1MEc LINE L1 -765 5450 5147 3074 257 50 44 chr2 111521441 111522470 -141734113 + L1M4 LINE L1 2 1037 -5505 223 127 18 55 chr2 111522473 111522528 -141734055 + (TTATA)n Simple_repeat Simple_repeat 5 57 0 7532 238 83 56 chr2 111522532 111522964 -141733619 + L1M4 LINE L1 1032 1451 -5193 306 81 0 0 chr2 111522964 111523001 -141733582 - tRNA-Lys-AAG tRNA tRNA -39 37 1 7532 238 83 56 chr2 111523001 111523463 -141733120 + L1M4 LINE L1 1451 1899 -4745 2160 120 10 3 chr2 111523463 111523763 -141732820 + AluSx SINE Alu 1 302 -10 7532 238 83 56 chr2 111523763 111524314 -141732269 + L1M4 LINE L1 1899 2434 -4210 2082 134 10 0 chr2 111524314 111524613 -141731970 + AluSp SINE Alu 1 302 -11 7532 238 83 56 chr2 111524613 111526518 -141730065 + L1M4 LINE L1 2434 4581 -2063 1823 82 68 11 chr2 111526518 111526798 -141729785 + L1PA13 LINE L1 5864 6159 -4 7532 238 83 56 chr2 111526798 111527889 -141728694 + L1M4 LINE L1 4581 5642 -1002 23 0 0 0 chr2 111527889 111527912 -141728671 + AT_rich Low_complexity Low_complexity 1 23 0 2244 95 0 10 chr2 111527934 111528229 -141728354 - AluSc SINE Alu -15 294 3 1493 253 66 17 chr2 111528533 111529121 -141727462 - L1MEc LINE L1 -1163 5052 4436 291 160 64 0 chr2 111529146 111529240 -141727343 + (TA)n Simple_repeat Simple_repeat 1 100 0 1008 264 63 92 chr2 111529399 111529792 -141726791 - L1MEc LINE L1 -2703 3512 3109 269 133 0 0 chr2 111529792 111529837 -141726746 - MADE1 DNA Mariner -34 46 2 1008 264 63 92 chr2 111529837 111530465 -141726118 - L1MEc LINE L1 -3106 3109 2478 316 242 30 0 chr2 111530649 111530748 -141725835 - L1MEc LINE L1 -4309 2087 1986 2209 102 0 3 chr2 111530911 111531204 -141725379 - AluSg SINE Alu -16 294 3 1332 285 58 37 chr2 111531215 111532007 -141724576 - L1MEc LINE L1 -4522 1874 1066 270 176 26 43 chr2 111532039 111532449 -141724134 + (TA)n Simple_repeat Simple_repeat 1 403 0 1011 267 179 67 chr2 111532453 111533364 -141723219 - L1MEc LINE L1 -5335 1061 49 1582 163 25 0 chr2 111533988 111534233 -141722350 + AluSc SINE Alu 1 251 -58 1842 165 95 14 chr2 111534233 111534603 -141721980 + MSTB1 LTR MaLR 30 429 -3 927 240 106 12 chr2 111534604 111534925 -141721658 - L1M4 LINE L1 -1761 4385 4035 1066 216 39 48 chr2 111534925 111535084 -141721499 - L1MDb LINE L1 -4895 1645 1486 1783 131 94 28 chr2 111535084 111535436 -141721147 + THE1C LTR MaLR 1 375 0 1066 216 39 48 chr2 111535436 111535823 -141720760 - L1MDb LINE L1 -5054 1486 1186 2177 119 0 10 chr2 111535823 111536126 -141720457 + AluY SINE Alu 1 300 -11 1310 208 0 25 chr2 111536149 111536385 -141720198 + Tigger7 DNA MER2_type 2 231 -2256 510 198 21 0 chr2 111536404 111536500 -141720083 + Tigger7 DNA MER2_type 2389 2486 -1 405 214 71 0 chr2 111536502 111536600 -141719983 - L1MDb LINE L1 -5366 1177 1073 1953 63 0 0 chr2 111537039 111537277 -141719306 - AluY SINE Alu -10 301 64 828 271 83 37 chr2 111537523 111537933 -141718650 - L1MDb LINE L1 -6078 462 34 801 162 0 0 chr2 111537980 111538128 -141718455 - L1MA4 LINE L1 -7 6293 6146 807 117 0 0 chr2 111538128 111538248 -141718335 + L1MA4 LINE L1 6047 6166 -134 215 375 23 0 chr2 111540116 111540204 -141716379 + MIR SINE MIR 59 148 -114 299 248 46 142 chr2 111540474 111540692 -141715891 - MIR SINE MIR -13 249 53 182 250 79 105 chr2 111540820 111540896 -141715687 - L2 LINE L2 -1 3312 3239 1390 238 25 20 chr2 111541817 111542170 -141714413 - MER4D LTR ERV1 0 903 549 1584 180 10 24 chr2 111542200 111542489 -141714094 - MER49 LTR ERV1 -638 285 1 206 235 25 34 chr2 111543281 111543400 -141713183 + GA-rich Low_complexity Low_complexity 4 121 0 450 263 0 72 chr2 111543413 111543607 -141712976 + GA-rich Low_complexity Low_complexity 1 180 0 747 296 86 10 chr2 111544127 111544431 -141712152 - MER46C DNA MER2_type -11 327 1 634 296 46 11 chr2 111544451 111544711 -141711872 - L1MC/D LINE L1 -2030 5778 5510 1300 227 164 8 chr2 111544727 111545123 -141711460 - MLT1C LTR MaLR -9 458 1 787 235 120 96 chr2 111545243 111545685 -141710898 - L1MD2 LINE L1 -13 6346 5887 2260 117 0 3 chr2 111545685 111545993 -141710590 - AluSx SINE Alu -5 307 1 787 235 120 96 chr2 111545993 111546090 -141710493 - L1MD2 LINE L1 -472 5887 5794 449 344 79 6 chr2 111547293 111547510 -141709073 + MIR SINE MIR 5 235 -27 335 218 28 106 chr2 111548237 111548379 -141708204 + MLT1K LTR MaLR 373 503 -85 397 318 138 23 chr2 111548821 111549038 -141707545 + MIR SINE MIR 18 259 -3 22 35 0 0 chr2 111549099 111549128 -141707455 + AT_rich Low_complexity Low_complexity 1 29 0 481 297 31 26 chr2 111549201 111549393 -141707190 + MIR SINE MIR 5 197 -65 760 253 131 13 chr2 111550607 111550836 -141705747 + MIR SINE MIR 7 262 0 198 103 0 0 chr2 111552239 111552268 -141704315 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 5009 79 5 8 chr2 111552871 111553097 -141703486 + PABL_A LTR ERV1 1 226 -434 2143 109 17 0 chr2 111553097 111553390 -141703193 + AluY SINE Alu 1 298 -13 5009 79 5 8 chr2 111553390 111553823 -141702760 + PABL_A LTR ERV1 226 658 -2 200 128 0 26 chr2 111554123 111554162 -141702421 + (AAATG)n Simple_repeat Simple_repeat 3 40 0 3282 213 33 46 chr2 111554962 111556835 -141699748 - L1MC2 LINE L1 -91 6253 4305 2284 97 3 7 chr2 111557251 111557560 -141699023 - AluSc SINE Alu -1 308 1 180 0 0 0 chr2 111560853 111560873 -141695710 + (CAGCC)n Simple_repeat Simple_repeat 1 20 0 263 259 295 0 chr2 111561633 111561745 -141694838 - MIR SINE MIR -41 221 77 2332 82 7 0 chr2 111561747 111562041 -141694542 + AluSc SINE Alu 4 299 -10 2243 94 17 7 chr2 111562041 111562340 -141694243 + AluY SINE Alu 1 302 -9 1000 270 74 55 chr2 111562370 111562737 -141693846 - MLT1H LTR MaLR -109 440 67 344 299 42 7 chr2 111562974 111563118 -141693465 - L1ME2 LINE L1 -10 6154 6006 2962 152 2 4 chr2 111563125 111563586 -141692997 + MER66B LTR ERV1 27 486 0 854 184 65 83 chr2 111563612 111563687 -141692896 - L1ME2 LINE L1 -174 5990 5915 4049 153 33 31 chr2 111563687 111564470 -141692113 - LTR1 LTR ERV1 0 785 1 854 184 65 83 chr2 111564470 111564672 -141691911 - L1ME2 LINE L1 -249 5915 5718 1619 259 103 44 chr2 111564673 111564792 -141691791 - L1ME3 LINE L1 -24 6207 6096 1778 187 0 16 chr2 111564792 111565108 -141691475 - AluJo SINE Alu -1 311 1 1619 259 103 44 chr2 111565108 111566616 -141689967 - L1ME3 LINE L1 -135 6096 4678 262 45 45 0 chr2 111566616 111566660 -141689923 + (TCTA)n Simple_repeat Simple_repeat 4 49 0 1619 259 103 44 chr2 111566660 111568425 -141688158 - L1ME3 LINE L1 -1553 4678 2602 908 278 45 20 chr2 111568429 111568872 -141687711 - L1ME3 LINE L1 -4590 1806 1353 1246 189 164 34 chr2 111568881 111569204 -141687379 - MLT1A1 LTR MaLR 0 365 1 2068 287 95 39 chr2 111569210 111570435 -141686148 - L1ME3 LINE L1 -5056 1340 48 1656 257 98 35 chr2 111570465 111571682 -141684901 - L1ME2 LINE L1 -549 5613 4329 2047 148 0 0 chr2 111572313 111572610 -141683973 - AluSx SINE Alu -15 297 1 686 300 46 17 chr2 111572683 111572920 -141683663 - MIR SINE MIR 0 262 19 4076 129 28 0 chr2 111573190 111573831 -141682752 - L1PA16 LINE L1 -14 6152 5494 1918 243 28 32 chr2 111574010 111574542 -141682041 - MER99 DNA DNA -1 827 298 21 36 0 0 chr2 111574893 111574921 -141681662 + AT_rich Low_complexity Low_complexity 1 28 0 5491 217 11 3 chr2 111575182 111575998 -141680585 + L1PA16 LINE L1 4037 4845 -1321 2277 111 3 0 chr2 111575998 111576304 -141680279 - AluSq SINE Alu -6 307 1 5491 217 11 3 chr2 111576304 111577600 -141678983 + L1PA16 LINE L1 4845 6165 -1 28 0 0 0 chr2 111577600 111577628 -141678955 + AT_rich Low_complexity Low_complexity 1 28 0 3304 140 70 22 chr2 111577855 111578439 -141678144 - LTR9 LTR ERV1 0 612 1 241 363 86 31 chr2 111578705 111578997 -141677586 - L2 LINE L2 -1295 2019 1712 351 281 136 20 chr2 111579148 111579347 -141677236 - L1MC/D LINE L1 -2331 5477 5256 402 316 33 78 chr2 111579594 111579926 -141676657 - HAL1 LINE L1 -1131 1376 1060 259 259 25 0 chr2 111579971 111580052 -141676531 + CT-rich Low_complexity Low_complexity 2 84 0 342 0 0 0 chr2 111580736 111580774 -141675809 + (GA)n Simple_repeat Simple_repeat 2 39 0 389 158 8 47 chr2 111581289 111581416 -141675167 + (TA)n Simple_repeat Simple_repeat 1 122 0 2513 79 0 0 chr2 111582611 111582916 -141673667 - AluY SINE Alu -6 305 1 1364 284 79 15 chr2 111583154 111583764 -141672819 + L2 LINE L2 1776 2424 -890 5025 123 56 48 chr2 111583925 111585356 -141671227 - pTR5 LTR ERV1 0 2606 1524 904 158 0 13 chr2 111585356 111585508 -141671075 + MER6A DNA MER2_type 84 233 -372 1658 193 17 51 chr2 111586078 111586157 -141670426 - MER6 DNA MER2_type 0 865 785 1749 156 63 4 chr2 111586157 111586457 -141670126 + AluSx SINE Alu 1 316 0 1658 193 17 51 chr2 111586457 111586727 -141669856 - MER6 DNA MER2_type -80 785 266 1955 63 59 37 chr2 111586992 111587312 -141669271 + AluY SINE Alu 6 331 0 221 240 107 91 chr2 111587675 111587796 -141668787 - L3b LINE CR1 -19 1564 1442 25 65 0 0 chr2 111588229 111588275 -141668308 + AT_rich Low_complexity Low_complexity 1 46 0 4399 198 30 40 chr2 111589524 111590421 -141666162 - MER54A LTR ERVL 0 901 14 219 186 0 0 chr2 111590421 111590464 -141666119 + (TA)n Simple_repeat Simple_repeat 2 44 0 404 323 7 19 chr2 111590561 111590716 -141665867 + L2 LINE L2 3159 3311 -2 2096 203 30 32 chr2 111591052 111591519 -141665064 - MER70A LTR ERVL -3 469 4 352 326 70 49 chr2 111591614 111591899 -141664684 + L1ME3A LINE L1 314 604 -5601 546 206 0 0 chr2 111592258 111592350 -141664233 + FLAM_A SINE Alu 1 92 -50 280 122 27 67 chr2 111592350 111592574 -141664009 + AluSx SINE Alu 14 299 -1 726 244 58 29 chr2 111592583 111592788 -141663795 + AluJo SINE Alu 84 294 -18 328 291 207 46 chr2 111593996 111594281 -141662302 + L1ME3A LINE L1 1002 1332 -4873 308 297 65 19 chr2 111594410 111594626 -141661957 + L1ME3A LINE L1 1547 1743 -845 382 253 263 21 chr2 111594688 111594882 -141661701 - MIR SINE MIR -16 246 6 416 278 83 44 chr2 111595061 111595313 -141661270 + L1ME3A LINE L1 2049 2310 -4086 364 301 87 23 chr2 111595334 111595679 -141660904 + L1ME3A LINE L1 2323 2689 -3526 22 70 0 0 chr2 111595967 111596010 -141660573 + AT_rich Low_complexity Low_complexity 1 43 0 372 264 60 55 chr2 111596332 111596514 -141660069 + L1ME3A LINE L1 5067 5249 -966 362 285 104 16 chr2 111596532 111596725 -141659858 + L1ME3A LINE L1 5796 6005 -234 360 283 91 75 chr2 111597006 111597434 -141659149 + MLT1H LTR MaLR 100 534 -15 2819 243 73 18 chr2 111597858 111597943 -141658640 + L1ME LINE L1 4285 4364 -1802 2284 114 0 0 chr2 111597943 111598242 -141658341 + AluSx SINE Alu 1 299 -13 2819 243 73 18 chr2 111598242 111599591 -141656992 + L1ME LINE L1 4364 5789 -377 327 269 58 29 chr2 111599598 111599702 -141656881 + MER63 DNA MER1_type 730 1061 0 429 250 85 38 chr2 111599862 111600074 -141656509 - MLT1L LTR MaLR -2 613 392 186 103 0 0 chr2 111600802 111600831 -141655752 + (TG)n Simple_repeat Simple_repeat 2 30 0 21 0 0 0 chr2 111600831 111600852 -141655731 + AT_rich Low_complexity Low_complexity 1 21 0 258 81 0 0 chr2 111602600 111602637 -141653946 + (CA)n Simple_repeat Simple_repeat 1 37 0 2729 198 67 0 chr2 111603012 111603583 -141653000 + L1MC3 LINE L1 5425 6033 -1752 204 40 0 0 chr2 111603597 111603622 -141652961 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 1242 191 21 0 chr2 111603636 111603871 -141652712 - L1MC3 LINE L1 -24 7761 7522 1873 171 3 9 chr2 111603871 111604204 -141652379 + L1MC3 LINE L1 7232 7562 -223 336 191 15 0 chr2 111604210 111604278 -141652305 + L1MC3 LINE L1 7661 7729 -56 192 77 0 0 chr2 111604440 111604466 -141652117 + (TAGA)n Simple_repeat Simple_repeat 1 26 0 1026 143 6 6 chr2 111604521 111604682 -141651901 + AluSx SINE Alu 1 161 -151 1397 165 8 12 chr2 111604961 111605241 -141651342 + LTR4 LTR ERV1 351 594 -2 1018 122 0 0 chr2 111605241 111605389 -141651194 + AluSx SINE Alu 153 300 -10 268 266 202 9 chr2 111606048 111606157 -141650426 + L2 LINE L2 3138 3267 -5 1833 173 0 13 chr2 111606311 111606611 -141649972 + AluSx SINE Alu 1 296 -16 213 316 13 26 chr2 111607002 111607078 -141649505 - MER5A DNA MER1_type -27 162 88 2189 159 116 0 chr2 111607664 111608042 -141648541 + MSTB LTR MaLR 5 426 0 3150 187 62 14 chr2 111608270 111608852 -141647731 + LTR9 LTR ERV1 3 612 0 242 319 36 29 chr2 111609183 111609321 -141647262 - MER5A DNA MER1_type -1 188 50 1878 168 0 0 chr2 111610214 111610505 -141646078 + AluSx SINE Alu 1 291 -21 328 228 54 11 chr2 111611029 111611121 -141645462 - MER91B DNA MER1_type -5 185 90 272 327 45 18 chr2 111611936 111612046 -141644537 - MER81 DNA DNA -1 113 1 32 26 0 0 chr2 111613317 111613356 -141643227 + AT_rich Low_complexity Low_complexity 1 39 0 247 246 0 88 chr2 111613385 111613499 -141643084 - L1ME4a LINE L1 -52 6069 5966 383 147 40 7 chr2 111613978 111614128 -141642455 + (TA)n Simple_repeat Simple_repeat 2 156 0 1491 199 0 51 chr2 111614140 111614451 -141642132 - AluJo SINE Alu -17 295 1 189 321 86 53 chr2 111614717 111614768 -141641815 - L2 LINE L2 -520 2794 2746 2248 90 10 17 chr2 111614768 111615069 -141641514 + AluSc SINE Alu 1 299 -10 189 321 86 53 chr2 111615069 111615226 -141641357 - L2 LINE L2 -568 2746 2579 344 335 166 22 chr2 111615432 111615895 -141640688 - L2 LINE L2 -1031 2283 1754 180 0 0 0 chr2 111616490 111616510 -141640073 + (TA)n Simple_repeat Simple_repeat 2 21 0 32 86 0 0 chr2 111618754 111618835 -141637748 + AT_rich Low_complexity Low_complexity 1 81 0 1272 240 180 98 chr2 111619252 111619964 -141636619 - MER21B LTR ERV1 -77 786 17 8160 80 4 9 chr2 111621445 111622457 -141634126 + LTR13 LTR ERVK 1 1007 0 356 221 0 0 chr2 111622582 111622650 -141633933 - MER116 DNA Mariner -5 75 8 1264 92 0 0 chr2 111623036 111623209 -141633374 - AluYa5 SINE Alu -14 297 125 2503 58 0 0 chr2 111623216 111623511 -141633072 - AluY SINE Alu -16 295 1 189 0 0 0 chr2 111623514 111623535 -141633048 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 281 266 13 13 chr2 111624179 111624258 -141632325 + MIR SINE MIR 83 161 -101 5118 123 39 19 chr2 111624277 111625047 -141631536 + LTR1 LTR ERV1 1 785 0 205 211 0 0 chr2 111625096 111625134 -141631449 + (TTA)n Simple_repeat Simple_repeat 1 38 0 660 201 73 22 chr2 111626491 111626670 -141629913 + MER53 DNA DNA 1 188 -1 215 228 18 18 chr2 111628911 111628968 -141627615 + L2 LINE L2 3257 3313 0 460 292 43 12 chr2 111629159 111629320 -141627263 - MIR SINE MIR -37 225 60 1333 208 3 32 chr2 111680345 111680653 -141575930 + MER50 LTR ERV1 412 710 -24 1308 196 35 3 chr2 111680689 111680974 -141575609 + L1MC1 LINE L1 5581 5874 -459 232 254 45 15 chr2 111681064 111681131 -141575452 + L2 LINE L2 3245 3313 0 2192 107 0 3 chr2 111682553 111682851 -141573732 - AluSc SINE Alu -9 300 4 258 183 17 35 chr2 111683075 111683190 -141573393 + (CA)n Simple_repeat Simple_repeat 1 113 0 324 224 40 24 chr2 111683203 111683328 -141573255 + (CA)n Simple_repeat Simple_repeat 2 128 0 341 184 37 15 chr2 111683340 111683476 -141573107 + (CA)n Simple_repeat Simple_repeat 1 139 0 372 238 252 21 chr2 111684926 111685069 -141571514 + MIR SINE MIR 81 256 -6 892 251 75 63 chr2 111685199 111685692 -141570891 - MER34 LTR ERV1 -6 536 38 700 275 121 38 chr2 111686735 111687048 -141569535 - L2 LINE L2 -514 2800 2462 1864 166 71 30 chr2 111687321 111687855 -141568728 - MLT2A1 LTR ERVL 0 554 1 2452 102 42 11 chr2 111688531 111688884 -141567699 - THE1B LTR MaLR 0 364 1 323 269 43 57 chr2 111688888 111689029 -141567554 - MIR SINE MIR -109 153 15 35 29 0 44 chr2 111689589 111689618 -141566965 + AT_rich Low_complexity Low_complexity 1 30 -35 7269 42 1 3 chr2 111689618 111690588 -141565995 + L1PA5 LINE L1 5176 6143 -11 35 29 0 44 chr2 111690588 111690626 -141565957 + AT_rich Low_complexity Low_complexity 30 65 0 212 309 110 52 chr2 111690707 111691070 -141565513 + L2 LINE L2 2007 2390 -924 273 359 158 30 chr2 111691184 111691449 -141565134 + L2 LINE L2 2971 3269 -3 2475 51 3 19 chr2 111693330 111693641 -141562942 + AluY SINE Alu 1 306 -5 197 367 85 56 chr2 111694285 111694590 -141561993 + L2 LINE L2 2916 3229 -43 25 51 0 0 chr2 111696136 111696175 -141560408 + AT_rich Low_complexity Low_complexity 1 39 0 1982 115 3 0 chr2 111696276 111696564 -141560019 - L1PA10 LINE L1 -9 6159 5871 3559 97 26 2 chr2 111696564 111697072 -141559511 + L1PA10 LINE L1 5369 5888 -280 430 273 11 102 chr2 111697384 111697571 -141559012 - MER5B DNA MER1_type -3 175 6 370 291 17 8 chr2 111697612 111697729 -141558854 + L2 LINE L2 3196 3313 0 234 256 128 0 chr2 111698759 111698845 -141557738 - MER5A DNA MER1_type -84 105 9 2239 82 7 16 chr2 111700056 111700359 -141556224 + AluY SINE Alu 1 300 -11 1691 172 33 13 chr2 111700610 111700795 -141555788 - AluJb SINE Alu -3 309 114 183 42 0 0 chr2 111700795 111700819 -141555764 + (TTTTG)n Simple_repeat Simple_repeat 5 28 0 1691 172 33 13 chr2 111700819 111700936 -141555647 - AluJb SINE Alu -198 114 1 2424 84 0 0 chr2 111701410 111701709 -141554874 + AluSg SINE Alu 2 300 -10 1828 145 0 43 chr2 111702519 111702822 -141553761 - AluSx SINE Alu -18 294 5 201 74 0 0 chr2 111702827 111702854 -141553729 + (TG)n Simple_repeat Simple_repeat 2 28 0 379 115 0 48 chr2 111702854 111702958 -141553625 + (TA)n Simple_repeat Simple_repeat 1 99 0 559 257 64 37 chr2 111703497 111703987 -141552596 - L1M4b LINE L1 -3867 3090 2619 1552 257 60 77 chr2 111704249 111705265 -141551318 - L1M4b LINE L1 -4606 2353 1355 758 254 54 40 chr2 111705302 111705528 -141551055 - L1M4b LINE L1 -5609 1250 980 1321 243 7 17 chr2 111705528 111705829 -141550754 - AluJo SINE Alu -14 298 1 758 254 54 40 chr2 111705829 111705949 -141550634 - L1M4b LINE L1 -5879 980 863 2318 132 87 0 chr2 111705963 111706378 -141550205 + MER1A DNA MER1_type 34 525 -4 1798 298 60 48 chr2 111706417 111706898 -141549685 - L1M4b LINE L1 -6026 833 336 5644 65 0 59 chr2 111706898 111707716 -141548867 + L1PA8 LINE L1 5398 6167 -5 1798 298 60 48 chr2 111707716 111708045 -141548538 - L1M4b LINE L1 -6523 336 13 336 83 0 0 chr2 111708719 111708767 -141547816 + (A)n Simple_repeat Simple_repeat 1 48 0 429 20 0 0 chr2 111709328 111709378 -141547205 + (A)n Simple_repeat Simple_repeat 1 50 0 412 206 60 0 chr2 111710653 111710753 -141545830 + MLT2D LTR ERVL 1 105 -292 288 143 0 95 chr2 111710781 111710844 -141545739 + MLT2D LTR ERVL 341 414 0 877 95 42 113 chr2 111711222 111711390 -141545193 + MER51B LTR ERV1 1 156 -221 * 1667 177 27 0 chr2 111711367 111711666 -141544917 + MER51B LTR ERV1 71 377 0 569 172 7 0 chr2 111711712 111711817 -141544766 + MER63 DNA MER1_type 681 1644 -44 494 209 46 73 chr2 111713887 111714232 -141542351 + LTR54 LTR ERV1 62 478 -32 1783 180 59 5 chr2 111714235 111714640 -141541943 + MER57B LTR ERV1 8 434 0 434 157 176 0 chr2 111714930 111715038 -141541545 - LTR37A LTR ERV1 0 426 300 2180 204 39 39 chr2 111715122 111715695 -141540888 - MER34B LTR ERV1 0 565 11 229 259 2 112 chr2 111715717 111715859 -141540724 + MIR SINE MIR 32 161 -47 363 23 0 0 chr2 111715942 111715986 -141540597 + (TG)n Simple_repeat Simple_repeat 1 44 0 1826 247 176 39 chr2 111716483 111717545 -141539038 - MER69B DNA AcHobo -18 1208 1 1188 241 35 35 chr2 111717756 111718158 -141538425 + L1ME1 LINE L1 5760 6161 -5 801 301 68 24 chr2 111718182 111718521 -141538062 + HERV16 LTR ERVL 821 1174 -3822 2237 137 19 13 chr2 111718785 111719158 -141537425 + THE1C LTR MaLR 1 375 0 444 62 0 0 chr2 111719308 111719372 -141537211 + (TC)n Simple_repeat Simple_repeat 1 64 0 279 0 0 0 chr2 111719372 111719403 -141537180 + (TG)n Simple_repeat Simple_repeat 2 32 0 1862 182 3 0 chr2 111719590 111719898 -141536685 + AluJb SINE Alu 1 309 -3 370 271 193 0 chr2 111720070 111720210 -141536373 + LTR16A1 LTR ERVL 278 444 -13 923 169 0 0 chr2 111720494 111720648 -141535935 + MER41B LTR ERV1 482 635 0 4258 128 46 19 chr2 111720648 111721320 -141535263 + MER41B-int LTR ERV1 1 690 -5256 1503 93 49 0 chr2 111721321 111721526 -141535057 + MER41B-int LTR ERV1 1392 1606 -4340 1095 127 0 6 chr2 111721515 111721688 -141534895 + MER41B-int LTR ERV1 1846 2017 -3929 * 4706 118 38 29 chr2 111721684 111722457 -141534126 + MER41B-int LTR ERV1 2167 2946 -3000 * 8070 129 45 22 chr2 111722444 111723900 -141532683 + MER41B-int LTR ERV1 2856 4345 -670 2324 107 9 0 chr2 111724000 111724327 -141532256 + MER41B-int LTR ERV1 5617 5946 0 3619 117 26 0 chr2 111724327 111724864 -141531719 + MER41B LTR ERV1 1 551 -84 299 279 37 7 chr2 111725271 111725407 -141531176 + L1ME LINE L1 5714 5853 -268 22 70 0 0 chr2 111725435 111725478 -141531105 + AT_rich Low_complexity Low_complexity 1 43 0 288 159 0 0 chr2 111726229 111726273 -141530310 + MLT2C1 LTR ERVL 44 87 -310 * 1166 243 27 104 chr2 111726265 111726602 -141529981 + MLT1E2 LTR MaLR 75 348 -278 2081 132 3 0 chr2 111726602 111726897 -141529686 + AluSx SINE Alu 1 296 -16 1166 243 27 104 chr2 111726897 111727157 -141529426 + MLT1E2 LTR MaLR 348 626 0 1006 280 66 2 chr2 111727157 111727612 -141528971 + MLT1E2-int LTR MaLR 1 606 -765 1042 200 4 47 chr2 111728003 111728258 -141528325 - AluJo SINE Alu -68 244 1 1275 244 101 26 chr2 111728369 111728755 -141527828 + MLT1E2 LTR MaLR 212 626 0 267 321 61 44 chr2 111728788 111729739 -141526844 + L1MEc LINE L1 839 1643 -4572 7548 205 67 22 chr2 111730164 111732020 -141524563 - L1MC3 LINE L1 -42 7743 5804 460 230 134 52 chr2 111732129 111732349 -141524234 - L1MCa LINE L1 -3995 2569 2310 1387 136 41 0 chr2 111732349 111732570 -141524013 - MER30 DNA MER1_type 0 230 1 460 230 134 52 chr2 111732570 111732692 -141523891 - L1MCa LINE L1 -4254 2310 2199 1067 226 87 55 chr2 111732706 111733355 -141523228 - L1MCa LINE L1 -4425 2139 1310 255 61 0 0 chr2 111733355 111733388 -141523195 + (TTA)n Simple_repeat Simple_repeat 2 34 0 1067 226 87 55 chr2 111733388 111733471 -141523112 - L1MCa LINE L1 -5254 1310 1231 1615 249 22 32 chr2 111733705 111734212 -141522371 - L1MC3 LINE L1 -743 5403 5162 2397 95 0 0 chr2 111734212 111734517 -141522066 - AluY SINE Alu -6 305 1 1615 249 22 32 chr2 111734517 111734808 -141521775 - L1MC3 LINE L1 -984 5162 4870 1240 211 82 75 chr2 111734811 111735275 -141521308 - MLT1C LTR MaLR 0 467 1 2438 274 40 52 chr2 111735291 111735753 -141520830 - L1MC3 LINE L1 -2697 3449 2983 1729 178 7 3 chr2 111735753 111736046 -141520537 + AluSx SINE Alu 1 294 -18 2438 274 40 52 chr2 111736046 111736926 -141519657 - L1MC3 LINE L1 -3163 2983 2175 2772 258 23 66 chr2 111737083 111737198 -141519385 - L1MCa LINE L1 -4862 1183 1065 1425 195 73 153 chr2 111737198 111737988 -141518595 - LTR8A LTR ERV1 0 727 1 2772 258 23 66 chr2 111737988 111738123 -141518460 - L1MCa LINE L1 -4980 1065 926 1543 155 76 57 chr2 111738123 111738491 -141518092 - THE1C LTR MaLR 0 375 1 2772 258 23 66 chr2 111738491 111739302 -141517281 - L1MCa LINE L1 -5119 926 167 1791 216 95 14 chr2 111739423 111739845 -141516738 + MLT2B1 LTR ERVL 1 456 -64 423 56 0 0 chr2 111739845 111739899 -141516684 + (CA)n Simple_repeat Simple_repeat 1 54 0 364 346 47 38 chr2 111740323 111740664 -141515919 - ERVL LTR ERVL -1281 4483 4140 2190 111 13 0 chr2 111740769 111741075 -141515508 - AluSg SINE Alu 0 310 1 8239 192 26 37 chr2 111743013 111744357 -141512226 - L1MB1 LINE L1 -94 7514 6157 2164 129 13 0 chr2 111744357 111744666 -141511917 - AluSp SINE Alu 0 313 1 8239 192 26 37 chr2 111744666 111746171 -141510412 - L1MB1 LINE L1 -1451 6157 4688 1786 235 15 28 chr2 111746171 111746498 -141510085 - MSTD LTR MaLR 0 396 73 2215 138 8 24 chr2 111746498 111746868 -141509715 + THE1B LTR MaLR 1 364 0 1786 235 15 28 chr2 111746868 111746940 -141509643 - MSTD LTR MaLR -323 73 2 2722 255 35 9 chr2 111746943 111748002 -141508581 - L1MB1 LINE L1 -2880 4685 3496 1834 254 55 23 chr2 111748044 111749045 -141507538 - L1MB1 LINE L1 -4531 2965 2089 358 318 33 37 chr2 111749448 111749693 -141506890 - L1MB1 LINE L1 -5897 1599 1356 199 313 71 45 chr2 111749921 111750033 -141506550 - MIR SINE MIR -10 252 138 849 282 30 8 chr2 111750235 111750501 -141506082 - LTR16A1 LTR ERVL 0 457 186 236 185 154 0 chr2 111751363 111751428 -141505155 - LTR33A LTR ERVL -8 515 441 4578 253 94 8 chr2 111751440 111751507 -141505076 + L1PA13 LINE L1 2 62 -6725 2183 114 7 0 chr2 111751507 111751804 -141504779 - AluSq SINE Alu -14 299 1 4578 253 94 8 chr2 111751804 111752893 -141503690 + L1PA13 LINE L1 62 1258 -5529 1388 176 12 0 chr2 111752924 111753180 -141503403 + L1PA13 LINE L1 1407 1665 -5122 2542 93 6 0 chr2 111753180 111753536 -141503047 + L1PA13 LINE L1 5806 6163 0 317 311 81 14 chr2 111753538 111753747 -141502836 - LTR33A LTR ERVL -74 449 227 378 353 103 41 chr2 111754454 111754890 -141501693 + L1ME LINE L1 610 1072 -5562 2079 103 0 10 chr2 111754891 111755191 -141501392 + AluY SINE Alu 1 297 -14 748 273 65 72 chr2 111755345 111756208 -141500375 + L1ME LINE L1 1014 1922 -4903 2434 128 12 5 chr2 111756208 111756634 -141499949 - L1PA13 LINE L1 0 6163 5762 748 273 65 72 chr2 111756634 111756904 -141499679 + L1ME LINE L1 1922 2192 -4633 444 238 68 7 chr2 111756923 111757070 -141499513 + L1ME LINE L1 5810 5965 -699 381 58 0 0 chr2 111757154 111757206 -141499377 + (CA)n Simple_repeat Simple_repeat 1 52 0 1762 193 19 25 chr2 111757567 111757930 -141498653 + THE1C LTR MaLR 15 375 0 1767 116 28 39 chr2 111758277 111758561 -141498022 - AluSq SINE Alu -3 310 30 1584 272 100 38 chr2 111759457 111760015 -141496568 + MLT1E LTR MaLR 1 593 0 446 263 86 13 chr2 111760466 111760618 -141495965 + MER58C DNA MER1_type 53 215 0 302 250 35 0 chr2 111760618 111760734 -141495849 + L1ME2 LINE L1 6045 6164 0 191 218 18 0 chr2 111761263 111761318 -141495265 + A-rich Low_complexity Low_complexity 4 59 0 854 243 10 123 chr2 111761966 111762374 -141494209 + MLT1A1 LTR MaLR 4 365 0 354 176 22 11 chr2 111763216 111763307 -141493276 + GA-rich Low_complexity Low_complexity 3 94 0 3408 251 56 22 chr2 111763496 111764426 -141492157 - L1MCb LINE L1 -4850 1195 539 195 42 0 0 chr2 111764426 111764450 -141492133 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 3408 251 56 22 chr2 111764450 111765006 -141491577 - L1MCb LINE L1 -5506 539 3 2867 216 16 8 chr2 111765037 111765565 -141491018 + L1MC/D LINE L1 4590 5127 -1202 4416 110 47 64 chr2 111765565 111766017 -141490566 - MER4E LTR ERV1 0 779 345 2126 110 0 10 chr2 111766017 111766309 -141490274 + AluSc SINE Alu 1 289 -20 4416 110 47 64 chr2 111766309 111766649 -141489934 - MER4E LTR ERV1 -434 345 1 2867 216 16 8 chr2 111766649 111767113 -141489470 + L1MC/D LINE L1 5127 5586 -743 222 37 0 0 chr2 111767113 111767140 -141489443 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 1000 159 164 56 chr2 111767153 111767385 -141489198 - AluJb SINE Alu -24 288 32 1626 175 64 9 chr2 111767385 111767711 -141488872 + MER50 LTR ERV1 3 346 -388 2147 73 9 73 chr2 111767924 111768252 -141488331 - AluY SINE Alu -4 307 1 313 268 45 38 chr2 111768409 111768590 -141487993 - MLT1J1 LTR MaLR 0 446 263 3537 185 83 5 chr2 111768944 111769691 -141486892 - L1MC2 LINE L1 -96 6666 5862 4730 117 9 11 chr2 111769692 111770992 -141485591 + L1PA11 LINE L1 4747 6173 -1 1056 201 48 58 chr2 111771002 111771457 -141485126 - L1MC2 LINE L1 -743 5821 5411 680 239 97 0 chr2 111771519 111771695 -141484888 + MER20 DNA MER1_type 27 219 0 1309 267 34 19 chr2 111772115 111772587 -141483996 + L1MCb LINE L1 3 481 -5564 1773 237 26 4 chr2 111772643 111773184 -141483399 - L1MC2 LINE L1 -2916 3648 3096 1289 157 5 5 chr2 111773185 111773401 -141483182 + AluJo SINE Alu 87 302 -10 2948 238 68 67 chr2 111773402 111774054 -141482529 - L1MC2 LINE L1 -3458 3106 2456 1997 102 11 28 chr2 111774054 111774338 -141482245 - AluSc SINE Alu -30 279 1 2948 238 68 67 chr2 111774338 111774801 -141481782 - L1MC2 LINE L1 -4108 2456 1995 1972 122 7 18 chr2 111774801 111775107 -141481476 - AluSx SINE Alu 0 303 1 2948 238 68 67 chr2 111775107 111776071 -141480512 - L1MC2 LINE L1 -4569 1995 773 2053 218 55 59 chr2 111776071 111776685 -141479898 - LTR9 LTR ERV1 0 612 1 2948 238 68 67 chr2 111776685 111777119 -141479464 - L1MC2 LINE L1 -5791 773 341 2306 221 63 20 chr2 111777137 111777721 -141478862 - L1MCa LINE L1 -5809 617 9 2350 77 7 7 chr2 111777981 111778278 -141478305 + AluYa5 SINE Alu 1 297 -14 208 234 138 21 chr2 111778743 111778837 -141477746 - L3 LINE CR1 -853 724 620 206 167 0 21 chr2 111778875 111778923 -141477660 + (TA)n Simple_repeat Simple_repeat 1 47 0 29 0 0 0 chr2 111780694 111780723 -141475860 + AT_rich Low_complexity Low_complexity 1 29 0 225 250 278 0 chr2 111781256 111781364 -141475219 - MIR SINE MIR -1 261 124 4013 206 122 9 chr2 111782819 111783797 -141472786 - L1MC3 LINE L1 -6 7779 6692 3313 124 27 8 chr2 111783902 111784419 -141472164 - MER1A DNA MER1_type 0 527 1 865 288 90 80 chr2 111784479 111785105 -141471478 + HAL1 LINE L1 995 1634 -873 2333 52 0 0 chr2 111785105 111785393 -141471190 - L1PA5 LINE L1 -7 6147 5860 865 288 90 80 chr2 111785393 111785680 -141470903 + HAL1 LINE L1 1634 1917 -590 225 324 129 18 chr2 111786290 111786460 -141470123 - L2 LINE L2 -1070 2244 2056 496 286 94 41 chr2 111786467 111786712 -141469871 - MIR SINE MIR -4 258 1 232 333 32 21 chr2 111789051 111789144 -141467439 + L2 LINE L2 3216 3309 -4 217 289 24 36 chr2 111789735 111789818 -141466765 + MIR SINE MIR 48 129 -133 249 343 103 45 chr2 111789823 111790287 -141466296 - MLT1L LTR MaLR -1 614 124 213 291 0 0 chr2 111791358 111791461 -141465122 + (CA)n Simple_repeat Simple_repeat 2 104 0 2281 107 3 3 chr2 111792196 111792504 -141464079 - AluSx SINE Alu -2 310 3 428 268 77 41 chr2 111792516 111792800 -141463783 - L1ME3A LINE L1 -1 6169 5874 418 297 73 30 chr2 111792882 111793047 -141463536 + L2 LINE L2 3142 3313 0 306 297 18 9 chr2 111794587 111794698 -141461885 + MER103 DNA DNA 48 159 -7 1591 190 45 43 chr2 111796912 111797286 -141459297 + MLT1B LTR MaLR 3 377 -13 320 349 73 32 chr2 111797935 111798153 -141458430 + L1MEd LINE L1 229 455 -5664 459 302 60 49 chr2 111798218 111798507 -141458076 + L1MEd LINE L1 516 800 -5319 2016 119 7 10 chr2 111798507 111798802 -141457781 - AluSq SINE Alu -15 298 5 459 302 60 49 chr2 111798802 111799223 -141457360 + L1MEd LINE L1 800 1234 -4885 617 342 30 24 chr2 111799260 111799596 -141456987 + L1MEd LINE L1 1389 1726 -4584 301 240 30 30 chr2 111800044 111800144 -141456439 + L1MEd LINE L1 2257 2356 -3773 330 370 57 31 chr2 111800282 111800633 -141455950 + L1MEd LINE L1 2564 2923 -3206 267 263 61 18 chr2 111800728 111800842 -141455741 + L1P LINE L1 4502 4620 -1526 387 358 39 18 chr2 111800993 111801222 -141455361 - MIR SINE MIR -21 241 8 228 267 100 0 chr2 111802027 111802117 -141454466 + L1MC4 LINE L1 7923 8021 -21 1864 115 59 14 chr2 111802576 111802863 -141453720 - AluSc SINE Alu -6 303 4 2192 98 0 3 chr2 111802873 111803205 -141453378 - AluSq SINE Alu 0 333 3 26 30 0 0 chr2 111803533 111803566 -141453017 + AT_rich Low_complexity Low_complexity 1 33 0 847 144 0 0 chr2 111803738 111803863 -141452720 + AluJb SINE Alu 1 125 -187 355 305 62 0 chr2 111803867 111803995 -141452588 - L1MC4 LINE L1 -1323 6719 6584 263 172 0 17 chr2 111803998 111804056 -141452527 + (CATATA)n Simple_repeat Simple_repeat 5 61 0 303 333 0 0 chr2 111804056 111804146 -141452437 + L1MC4 LINE L1 6614 6703 -1339 378 110 6 80 chr2 111804146 111804309 -141452274 + (TA)n Simple_repeat Simple_repeat 2 152 0 546 135 0 58 chr2 111804323 111804599 -141451984 + (TA)n Simple_repeat Simple_repeat 1 259 0 225 65 0 0 chr2 111804619 111804650 -141451933 + (TC)n Simple_repeat Simple_repeat 2 32 0 1779 166 0 0 chr2 111804673 111804950 -141451633 - AluJb SINE Alu -35 277 1 1647 169 27 7 chr2 111805652 111805948 -141450635 + MER74A LTR ERVL 1 302 -256 1012 276 39 98 chr2 111805962 111806961 -141449622 + L1ME LINE L1 501 1440 -5090 369 224 89 51 chr2 111807096 111807333 -141449250 + L1ME LINE L1 1675 1920 -4620 2593 251 104 31 chr2 111807354 111808268 -141448315 + L1M4 LINE L1 5 985 -5557 1552 243 65 25 chr2 111808267 111808856 -141447727 + L1M4 LINE L1 2772 3383 -3261 * 202 250 0 0 chr2 111809643 111809683 -141446900 + (TATG)n Simple_repeat Simple_repeat 1 40 0 373 227 0 0 chr2 111809712 111809805 -141446778 + L1ME LINE L1 3023 3115 -3425 2271 105 3 0 chr2 111810249 111810544 -141446039 - AluSx SINE Alu -16 296 1 284 48 24 0 chr2 111810742 111810784 -141445799 + (GGAGA)n Simple_repeat Simple_repeat 5 47 0 232 269 26 51 chr2 111812767 111812845 -141443738 - L2 LINE L2 0 3272 3197 1299 253 68 37 chr2 111812877 111813332 -141443251 - L1ME3 LINE L1 -12 6150 5682 2035 117 4 0 chr2 111813485 111813786 -141442797 - AluSx SINE Alu 0 302 1 222 302 0 0 chr2 111813863 111813916 -141442667 + polypyrimidine Low_complexity Low_complexity 4 56 0 973 279 67 48 chr2 111813918 111814459 -141442124 - L1MC4 LINE L1 -145 7897 7347 357 196 157 89 chr2 111814569 111814849 -141441734 - L1ME4a LINE L1 -30 6091 5793 261 0 0 0 chr2 111815238 111815267 -141441316 + (TG)n Simple_repeat Simple_repeat 2 30 0 180 341 100 35 chr2 111816180 111816350 -141440233 + L2 LINE L2 2395 2575 -739 660 335 13 18 chr2 111816436 111816663 -141439920 - MIR SINE MIR -32 230 5 258 349 35 61 chr2 111816851 111817049 -141439534 + L2 LINE L2 2870 3062 -210 3872 150 45 20 chr2 111817071 111817818 -141438765 + LTR1B LTR ERV1 1 785 0 184 365 0 0 chr2 111817857 111817920 -141438663 + L2 LINE L2 3107 3169 -103 480 365 5 20 chr2 111819686 111819883 -141436700 - MIR SINE MIR -28 234 41 1389 231 19 29 chr2 111820609 111820985 -141435598 + MLT1A2 LTR MaLR 3 374 0 644 291 47 111 chr2 111821305 111821491 -141435092 + L1MB8 LINE L1 4119 4315 -1831 207 0 0 0 chr2 111821491 111821514 -141435069 + (TA)n Simple_repeat Simple_repeat 1 23 0 644 291 47 111 chr2 111821514 111821744 -141434839 + L1MB8 LINE L1 4315 4558 -1588 2196 97 7 13 chr2 111821744 111822044 -141434539 + AluSx SINE Alu 1 298 -14 483 0 45 0 chr2 111822044 111822111 -141434472 + (TA)n Simple_repeat Simple_repeat 2 71 0 644 291 47 111 chr2 111822111 111822456 -141434127 + L1MB8 LINE L1 4556 4833 -1313 273 89 0 0 chr2 111822759 111822804 -141433779 + (TG)n Simple_repeat Simple_repeat 1 45 0 222 118 15 59 chr2 111822804 111822872 -141433711 + (CAGAGA)n Simple_repeat Simple_repeat 6 70 0 276 309 68 14 chr2 111823013 111823220 -141433363 + L1MB8 LINE L1 5363 5580 -2228 304 339 57 22 chr2 111823271 111823498 -141433085 + L1MB8 LINE L1 5666 5900 -278 3742 49 6 16 chr2 111823500 111823987 -141432596 + L1PA7 LINE L1 5672 6153 -1 397 276 110 0 chr2 111824017 111824162 -141432421 + L1MD1 LINE L1 4000 4160 -1986 230 219 16 0 chr2 111824196 111824260 -141432323 + GA-rich Low_complexity Low_complexity 1 65 0 1934 244 68 27 chr2 111824277 111825010 -141431573 + L1MD1 LINE L1 4175 4937 -1209 679 239 40 17 chr2 111825011 111825187 -141431396 - MIR SINE MIR -38 224 45 510 266 69 6 chr2 111825461 111825634 -141430949 + L1MD1 LINE L1 3429 3612 -2534 3766 234 50 41 chr2 111825642 111826256 -141430327 + L1MD1 LINE L1 4111 4718 -1524 1802 170 28 0 chr2 111826256 111826538 -141430045 - AluSx SINE Alu -16 296 7 3766 234 50 41 chr2 111826538 111828021 -141428562 + L1MD1 LINE L1 4718 6229 -13 2986 204 39 16 chr2 111828253 111828924 -141427659 + L1MD1 LINE L1 5543 6228 -14 2382 55 14 10 chr2 111828943 111829236 -141427347 - AluSp SINE Alu -8 305 12 216 250 36 0 chr2 111829296 111829352 -141427231 + L2 LINE L2 3215 3272 0 207 100 0 0 chr2 111829438 111829468 -141427115 + (CA)n Simple_repeat Simple_repeat 1 30 0 1635 257 99 30 chr2 111829468 111830163 -141426420 + L1MC4a LINE L1 5355 6101 -1707 518 0 16 0 chr2 111830164 111830226 -141426357 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 3463 263 38 42 chr2 111830297 111831496 -141425087 + L1MC4a LINE L1 6607 7801 -7 716 164 39 144 chr2 111831786 111831920 -141424663 + MLT1A2 LTR MaLR 4 150 -240 216 0 0 0 chr2 111831920 111831944 -141424639 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 716 164 39 144 chr2 111831944 111831964 -141424619 + MLT1A2 LTR MaLR 150 170 -220 2174 106 7 0 chr2 111831964 111832247 -141424336 - AluSx SINE Alu -27 285 1 716 164 39 144 chr2 111832247 111832384 -141424199 + MLT1A2 LTR MaLR 170 269 -121 771 259 11 5 chr2 111832384 111832569 -141424014 - MLT1A1 LTR MaLR -32 333 148 325 297 60 26 chr2 111832965 111833245 -141423338 - MLT1J2 LTR MaLR -35 415 91 32 26 0 0 chr2 111833360 111833399 -141423184 + AT_rich Low_complexity Low_complexity 1 39 0 286 211 33 67 chr2 111833493 111833583 -141423000 - L1ME LINE L1 -421 5741 5655 21 0 0 0 chr2 111833768 111833789 -141422794 + AT_rich Low_complexity Low_complexity 1 21 0 281 289 40 0 chr2 111834767 111834843 -141421740 - MIR SINE MIR -77 185 107 234 0 0 0 chr2 111835583 111835609 -141420974 + (TG)n Simple_repeat Simple_repeat 2 27 0 316 345 63 42 chr2 111836188 111836475 -141420108 + LTR16C LTR ERVL 199 491 0 2492 75 0 0 chr2 111837468 111837776 -141418807 - AluY SINE Alu -3 308 1 304 114 0 86 chr2 111837948 111838018 -141418565 - MLT2C2 LTR ERVL -2 462 407 498 130 16 49 chr2 111838018 111838141 -141418442 + (CAGAGA)n Simple_repeat Simple_repeat 2 120 0 937 226 35 89 chr2 111838142 111838559 -141418024 - MLT2D LTR ERVL -22 498 3 547 267 47 23 chr2 111839504 111839676 -141416907 + MER69A DNA AcHobo 2 177 0 591 188 0 0 chr2 111840221 111840317 -141416266 + FLAM_A SINE Alu 14 109 -33 4140 212 52 43 chr2 111840832 111841104 -141415479 + Charlie1a DNA MER1_type 1 269 -2492 1330 189 29 25 chr2 111841104 111841384 -141415199 + AluJo SINE Alu 1 281 -31 4140 212 52 43 chr2 111841384 111841868 -141414715 + Charlie1a DNA MER1_type 269 747 -2014 2487 115 6 11 chr2 111841868 111842234 -141414349 + THE1B LTR MaLR 1 364 0 4140 212 52 43 chr2 111842234 111842780 -141413803 + Charlie1a DNA MER1_type 747 1316 -139 305 301 0 21 chr2 111842797 111842890 -141413693 + L1MC4 LINE L1 6613 6703 -1339 336 150 0 0 chr2 111842890 111842970 -141413613 + (TA)n Simple_repeat Simple_repeat 2 81 0 562 201 14 51 chr2 111842972 111843186 -141413397 + Charlie1a DNA MER1_type 1249 1454 -1 238 313 13 48 chr2 111843269 111843662 -141412921 + HAL1b LINE L1 947 1300 -48 2078 149 16 2 chr2 111844705 111845082 -141411501 + L1M2 LINE L1 5323 5701 -611 1336 97 5 23 chr2 111845082 111845299 -141411284 - pTR5 LTR ERV1 -2054 384 172 275 265 10 0 chr2 111845302 111845400 -141411183 - LTR30 LTR ERV1 -80 642 544 3923 134 46 26 chr2 111845404 111846345 -141410238 - pTR5 LTR ERV1 -417 2021 745 522 85 37 0 chr2 111846345 111846427 -141410156 + L1M2 LINE L1 5688 5772 -519 258 32 0 0 chr2 111846436 111846467 -141410116 + (CA)n Simple_repeat Simple_repeat 1 31 0 2015 83 0 35 chr2 111846643 111846969 -141409614 - AluY SINE Alu 0 316 1 2018 124 17 7 chr2 111847260 111847558 -141409025 - AluSx SINE Alu -7 305 5 590 309 66 52 chr2 111848518 111849020 -141407563 - LTR33 LTR ERVL 0 521 13 207 0 0 0 chr2 111849603 111849626 -141406957 + (TG)n Simple_repeat Simple_repeat 1 23 0 324 310 6 63 chr2 111850144 111850318 -141406265 + MIR3 SINE MIR 30 193 -15 2148 96 147 182 chr2 111852038 111852642 -141403941 - LTR12 LTR ERV1 -131 583 1 547 213 90 130 chr2 111853849 111854281 -141402302 - MLT1D LTR MaLR -1 504 90 246 128 0 0 chr2 111854283 111854322 -141402261 + (T)n Simple_repeat Simple_repeat 1 39 0 1647 186 35 24 chr2 111854439 111854777 -141401806 - MER2 DNA MER2_type -1 343 2 1628 173 40 10 chr2 111855387 111855687 -141400896 + AluJb SINE Alu 1 309 -3 950 189 133 11 chr2 111856909 111857195 -141399388 + MER33 DNA MER1_type 4 324 0 309 245 50 72 chr2 111857421 111857560 -141399023 - MIR3 SINE MIR -37 171 36 2110 273 42 14 chr2 111857654 111858725 -141397858 - ERVL-C2 LTR ERVL -4326 1438 266 2371 104 0 0 chr2 111858765 111859073 -141397510 - AluY SINE Alu -3 308 1 277 250 0 0 chr2 111859076 111859152 -141397431 - ERVL-C2 LTR ERVL -5515 249 174 212 242 32 0 chr2 111859294 111859365 -141397218 + (TA)n Simple_repeat Simple_repeat 1 73 0 1810 198 31 10 chr2 111859390 111859774 -141396809 - MLT2C2 LTR ERVL -72 392 1 402 141 82 0 chr2 111859833 111859918 -141396665 - MLT2C2 LTR ERVL -372 92 1 572 333 89 4 chr2 111860094 111860319 -141396264 - MIR SINE MIR 0 262 19 1183 193 12 109 chr2 111861768 111862099 -141394484 + AluJo SINE Alu 4 302 0 302 182 61 0 chr2 111862314 111862380 -141394203 - MIR SINE MIR -79 183 114 189 338 0 15 chr2 111862393 111862461 -141394122 + MER5B DNA MER1_type 20 86 -92 295 266 95 105 chr2 111862556 111862748 -141393835 + MLT1J2 LTR MaLR 69 257 -193 942 222 10 0 chr2 111862748 111862951 -141393632 - MER3 DNA MER1_type -4 205 1 295 266 95 105 chr2 111862951 111863138 -141393445 + MLT1J2 LTR MaLR 257 444 -6 319 315 39 11 chr2 111863303 111863484 -141393099 + L1M4 LINE L1 75 260 -6282 270 132 0 0 chr2 111864002 111864055 -141392528 + (TC)n Simple_repeat Simple_repeat 1 53 0 681 211 45 99 chr2 111864058 111864480 -141392103 + L1M4 LINE L1 833 1231 -5311 581 201 67 0 chr2 111864514 111864663 -141391920 + L1MB4 LINE L1 6017 6175 -5 197 220 0 68 chr2 111864786 111864845 -141391738 + L2 LINE L2 3251 3305 -8 200 194 0 0 chr2 111864957 111864993 -141391590 + (CA)n Simple_repeat Simple_repeat 1 36 0 24 0 0 0 chr2 111865478 111865502 -141391081 + AT_rich Low_complexity Low_complexity 1 24 0 2167 114 0 7 chr2 111865854 111866151 -141390432 + AluSx SINE Alu 1 295 -17 841 213 6 0 chr2 111867580 111867754 -141388829 + Tigger4(Zombi) DNA MER2_type 1 175 -2556 3704 134 12 16 chr2 111867756 111868399 -141388184 + Tigger4(Zombi) DNA MER2_type 2091 2731 0 216 200 0 0 chr2 111869649 111869704 -141386879 + GA-rich Low_complexity Low_complexity 1 55 0 364 283 61 32 chr2 111872024 111872212 -141384371 - MIR SINE MIR -41 221 30 306 320 0 10 chr2 111872270 111872373 -141384210 + (TCCA)n Simple_repeat Simple_repeat 4 105 0 189 74 0 0 chr2 111872521 111872548 -141384035 + (CGAT)n Simple_repeat Simple_repeat 3 29 0 213 314 76 48 chr2 111872750 111872855 -141383728 + L2 LINE L2 3204 3311 -2 490 330 70 9 chr2 111872918 111873148 -141383435 + MIR SINE MIR 5 248 -14 201 74 0 0 chr2 111873202 111873229 -141383354 + (T)n Simple_repeat Simple_repeat 1 27 0 348 318 95 58 chr2 111873476 111873835 -141382748 - L2 LINE L2 -10 3303 2932 383 311 42 26 chr2 111874763 111874953 -141381630 - MIR3 SINE MIR -4 204 12 22 0 0 0 chr2 111875539 111875561 -141381022 + AT_rich Low_complexity Low_complexity 1 22 0 496 315 16 85 chr2 111877047 111877233 -141379350 - L2 LINE L2 -16 3256 3098 1235 191 113 30 chr2 111877233 111877568 -141379015 + MLT1A1 LTR MaLR 1 363 -2 496 315 16 85 chr2 111877568 111877686 -141378897 - L2 LINE L2 -174 3098 2973 196 359 57 53 chr2 111877775 111878193 -141378390 - L2 LINE L2 -437 2877 2458 458 203 14 109 chr2 111878415 111878553 -141378030 + FLAM_A SINE Alu 1 125 -8 1520 157 10 10 chr2 111878699 111878992 -141377591 - L1MA4 LINE L1 -172 6128 5836 539 260 40 17 chr2 111879024 111879197 -141377386 - MIR SINE MIR -12 250 74 23 0 0 0 chr2 111879359 111879382 -141377201 + AT_rich Low_complexity Low_complexity 1 23 0 217 277 0 0 chr2 111879674 111879721 -141376862 + polypurine Low_complexity Low_complexity 4 50 0 2294 93 0 0 chr2 111879849 111880138 -141376445 + AluSc SINE Alu 4 292 -17 234 312 13 0 chr2 111880412 111880489 -141376094 - LTR67 LTR ERVL -387 170 93 257 315 73 25 chr2 111880723 111881274 -141375309 + L1ME LINE L1 5255 5837 -333 259 325 191 10 chr2 111882444 111882638 -141373945 + MIR SINE MIR 22 250 -12 284 0 28 0 chr2 111882845 111882881 -141373702 + (TCTA)n Simple_repeat Simple_repeat 2 38 0 195 293 9 112 chr2 111883453 111883569 -141373014 + MIR3 SINE MIR 75 178 -30 582 328 157 23 chr2 111885296 111885902 -141370681 - L2 LINE L2 -601 2713 2027 474 276 111 66 chr2 111886301 111886376 -141370207 + L1MD2 LINE L1 434 504 -6453 2009 148 3 3 chr2 111886376 111886674 -141369909 + AluSx SINE Alu 1 298 -14 474 276 111 66 chr2 111886674 111886978 -141369605 + L1MD2 LINE L1 504 830 -6127 21 0 0 0 chr2 111887609 111887630 -141368953 + AT_rich Low_complexity Low_complexity 1 21 0 299 118 0 0 chr2 111887664 111887715 -141368868 + L1M LINE L1 5254 5304 -938 553 142 170 3 chr2 111887727 111887858 -141368725 + L1MD2 LINE L1 1466 1649 -5311 985 259 60 0 chr2 111887884 111888236 -141368347 + L1MB2 LINE L1 2661 3033 -3113 * 7996 202 35 35 chr2 111888231 111888939 -141367644 + L1MB2 LINE L1 3296 4003 -2168 1864 146 65 42 chr2 111888939 111889295 -141367288 - THE1B LTR MaLR 0 364 1 7996 202 35 35 chr2 111889295 111889507 -141367076 + L1MB2 LINE L1 4003 4214 -1957 207 0 0 0 chr2 111889507 111889530 -141367053 + (CA)n Simple_repeat Simple_repeat 1 23 0 7996 202 35 35 chr2 111889530 111891392 -141365191 + L1MB2 LINE L1 4214 6083 -88 2163 113 0 0 chr2 111891392 111891684 -141364899 + AluSp SINE Alu 1 292 -21 7996 202 35 35 chr2 111891684 111891771 -141364812 + L1MB2 LINE L1 6083 6169 -2 968 194 85 32 chr2 111891895 111892142 -141364441 + L1MD2 LINE L1 1711 1970 -4990 3210 241 67 16 chr2 111892166 111893505 -141363078 + L1MD2 LINE L1 5443 6858 -312 1406 113 27 54 chr2 111893533 111893754 -141362829 + AluSx SINE Alu 22 236 -76 404 206 145 0 chr2 111893799 111893930 -141362653 + L1MD1 LINE L1 6093 6242 0 7621 22 0 0 chr2 111894011 111894847 -141361736 + L1PA2 LINE L1 5320 6155 0 180 0 0 0 chr2 111894886 111894906 -141361677 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 2129 135 22 3 chr2 111894907 111895269 -141361314 - L1MB3 LINE L1 -38 6145 5777 2304 86 0 23 chr2 111895649 111895951 -141360632 + AluSg SINE Alu 1 295 -15 207 0 0 0 chr2 111895954 111895977 -141360606 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1917 133 39 0 chr2 111896219 111896498 -141360085 + AluSx SINE Alu 1 290 -22 184 298 35 0 chr2 111896588 111896645 -141359938 - MIR SINE MIR -116 146 88 197 309 112 51 chr2 111897937 111898115 -141358468 - MIR SINE MIR -52 210 22 224 288 0 96 chr2 111898226 111898351 -141358232 - MIR SINE MIR -61 201 89 1141 92 6 58 chr2 111898899 111899073 -141357510 + AluY SINE Alu 132 296 -15 567 250 55 14 chr2 111900450 111900670 -141355913 - L1MEd LINE L1 -5222 897 669 746 268 11 0 chr2 111901090 111901273 -141355310 - L1MEd LINE L1 -5933 186 2 414 0 0 0 chr2 111901311 111901357 -141355226 + (CA)n Simple_repeat Simple_repeat 2 47 0 279 71 0 0 chr2 111901688 111901730 -141354853 + (TG)n Simple_repeat Simple_repeat 2 43 0 2319 80 0 0 chr2 111902214 111902503 -141354080 - AluY SINE Alu -22 289 1 259 282 14 0 chr2 111902571 111902642 -141353941 - MIR SINE MIR -127 135 64 204 111 0 0 chr2 111902749 111902776 -141353807 - MER5A DNA MER1_type 0 189 163 378 0 0 0 chr2 111902808 111902850 -141353733 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 29 0 0 0 chr2 111902929 111902958 -141353625 + AT_rich Low_complexity Low_complexity 1 29 0 597 283 27 78 chr2 111903474 111903732 -141352851 - MIR SINE MIR -1 261 17 642 247 39 11 chr2 111903761 111903943 -141352640 - MER5A DNA MER1_type -2 187 1 2340 71 24 3 chr2 111904040 111904335 -141352248 - AluY SINE Alu -10 301 1 684 281 55 73 chr2 111904341 111905045 -141351538 - MER77 LTR ERV1 -23 582 24 692 297 71 17 chr2 111905703 111905942 -141350641 - MIR SINE MIR 0 262 11 237 329 0 59 chr2 111906195 111906280 -141350303 + L2 LINE L2 3150 3229 -43 2333 105 0 0 chr2 111906804 111907108 -141349475 - AluSq SINE Alu -9 304 1 31 58 0 0 chr2 111909154 111909206 -141347377 + AT_rich Low_complexity Low_complexity 1 52 0 689 297 42 8 chr2 111910390 111910629 -141345954 - MIR SINE MIR -9 253 7 206 306 46 65 chr2 111911988 111912047 -141344536 + MIR SINE MIR 34 92 -170 693 230 85 18 chr2 111912047 111912212 -141344371 + MER45A DNA AcHobo 3 178 0 206 306 46 65 chr2 111912212 111912260 -141344323 + MIR SINE MIR 92 139 -123 211 281 18 0 chr2 111912327 111912384 -141344199 + (TTG)n Simple_repeat Simple_repeat 3 60 0 2112 57 60 18 chr2 111912387 111912669 -141343914 - AluY SINE Alu -17 294 1 758 295 52 0 chr2 111912683 111912954 -141343629 + L2 LINE L2 1943 2227 -1087 1091 180 13 8 chr2 111912954 111913294 -141343289 + MLT1B LTR MaLR 1 615 -11 1504 309 122 11 chr2 111913300 111913956 -141342627 + L2 LINE L2 2229 2957 -357 455 269 80 33 chr2 111914004 111914216 -141342367 + L2 LINE L2 3091 3312 -1 616 247 114 31 chr2 111914645 111914872 -141341711 - MLT1H LTR MaLR -249 300 55 617 242 66 28 chr2 111915097 111915279 -141341304 + MER5A DNA MER1_type 1 189 0 242 270 54 36 chr2 111915447 111915558 -141341025 - MLT1-int LTR MaLR -826 545 433 668 248 175 52 chr2 111915841 111916321 -141340262 - MLT1H LTR MaLR -3 546 3 1118 250 80 27 chr2 111916547 111916771 -141339812 + MSTD LTR MaLR 1 254 -142 672 30 60 0 chr2 111916771 111916871 -141339712 + (TTCC)n Simple_repeat Simple_repeat 1 106 0 1118 250 80 27 chr2 111916871 111917022 -141339561 + MSTD LTR MaLR 254 396 0 7061 31 75 4 chr2 111917077 111918307 -141338276 - L1PA4 LINE L1 -3 6152 4836 187 279 36 36 chr2 111918326 111918437 -141338146 + L2 LINE L2 3203 3313 0 387 237 0 0 chr2 111918635 111918711 -141337872 + MER99 DNA DNA 18 93 -735 630 232 195 12 chr2 111919302 111919543 -141337040 + MER99 DNA DNA 205 489 -339 654 233 158 18 chr2 111919570 111919798 -141336785 + MER99 DNA DNA 564 823 -5 201 108 0 0 chr2 111920452 111920489 -141336094 + (T)n Simple_repeat Simple_repeat 1 37 0 277 381 63 41 chr2 111922817 111923211 -141333372 + L2 LINE L2 2826 3228 -44 23 33 0 0 chr2 111923217 111923247 -141333336 + AT_rich Low_complexity Low_complexity 1 30 0 2333 105 3 0 chr2 111924938 111925244 -141331339 - AluSx SINE Alu -4 308 2 304 314 115 90 chr2 111925387 111926144 -141330439 - L1M2 LINE L1 -5706 1143 368 239 211 0 0 chr2 111927175 111927213 -141329370 - AluJ/monomer SINE Alu -264 38 1 1702 116 112 0 chr2 111927837 111928095 -141328488 + AluSg SINE Alu 20 306 -4 508 244 78 0 chr2 111928219 111928334 -141328249 - FLAM_A SINE Alu -6 136 13 1263 243 148 54 chr2 111928342 111928451 -141328132 - HAL1 LINE L1 -135 2372 2275 2185 68 26 19 chr2 111928451 111928760 -141327823 - AluY SINE Alu 0 311 1 1263 243 148 54 chr2 111928760 111929077 -141327506 - HAL1 LINE L1 -232 2275 1989 180 0 0 0 chr2 111929077 111929097 -141327486 + (ATTG)n Simple_repeat Simple_repeat 1 20 0 1263 243 148 54 chr2 111929097 111929327 -141327256 - HAL1 LINE L1 -518 1989 1782 1620 110 4 4 chr2 111929327 111929554 -141327029 - AluSg/x SINE Alu -8 302 76 1263 243 148 54 chr2 111929554 111929711 -141326872 - HAL1 LINE L1 -725 1782 1480 360 190 288 27 chr2 111929731 111929915 -141326668 - HAL1 LINE L1 -1163 1344 1113 231 122 0 61 chr2 111930096 111930145 -141326438 + Alu SINE Alu 256 301 0 278 318 59 0 chr2 111930397 111930482 -141326101 + MIR3 SINE MIR 65 154 -54 1687 115 115 0 chr2 111930646 111930907 -141325676 + AluSc SINE Alu 1 291 -18 295 93 0 37 chr2 111930983 111931037 -141325546 - AluSc SINE Alu -6 293 242 595 200 7 0 chr2 111931056 111931191 -141325392 - L1M4 LINE L1 -1673 4473 4338 4449 158 13 4 chr2 111931191 111931887 -141324696 + MER44D DNA MER2_type 1 574 -31 2105 120 30 0 chr2 111931958 111932258 -141324325 - AluSx SINE Alu -3 309 1 1417 217 13 37 chr2 111932671 111932970 -141323613 - AluJo SINE Alu -9 293 2 189 0 0 0 chr2 111932976 111932997 -141323586 + (ATG)n Simple_repeat Simple_repeat 1 21 0 1945 87 17 70 chr2 111933002 111933300 -141323283 - AluSx SINE Alu -30 282 1 1326 203 7 29 chr2 111934075 111934381 -141322202 - AluJo SINE Alu -13 299 1 201 244 0 0 chr2 111935614 111935659 -141320924 + (CATA)n Simple_repeat Simple_repeat 2 46 0 465 203 49 55 chr2 111936569 111936677 -141319906 - L1MD3 LINE L1 -2 7993 7885 1560 127 40 4 chr2 111936677 111936905 -141319678 + MER46A DNA MER2_type 1 236 0 465 203 49 55 chr2 111936905 111936959 -141319624 - L1MD3 LINE L1 -110 7885 7832 * 1270 172 106 52 chr2 111936958 111937190 -141319393 - L1MD2 LINE L1 -214 6145 5884 2242 114 0 0 chr2 111937190 111937498 -141319085 - AluSx SINE Alu -4 308 1 1270 172 106 52 chr2 111937498 111937632 -141318951 - L1MD2 LINE L1 -475 5884 5759 909 183 0 12 chr2 111937632 111937801 -141318782 - AluSg/x SINE Alu -9 301 135 408 182 57 0 chr2 111937802 111937890 -141318693 - L1MD2 LINE L1 -589 5770 5678 348 299 167 36 chr2 111938556 111939216 -141317367 - L2 LINE L2 -1824 1490 727 615 188 0 26 chr2 111939220 111939337 -141317246 + AluJo SINE Alu 86 199 -113 324 295 257 12 chr2 111939338 111939657 -141316926 - L2 LINE L2 -2831 483 87 21 0 0 0 chr2 111940923 111940944 -141315639 + AT_rich Low_complexity Low_complexity 1 21 0 620 259 73 10 chr2 111941191 111941396 -141315187 + MER58A DNA MER1_type 1 218 -6 227 200 143 0 chr2 111941617 111941687 -141314896 - Charlie1b DNA MER1_type -8 515 436 1082 156 10 16 chr2 111941693 111941713 -141314870 - AluSc SINE Alu 0 309 290 1703 75 58 9 chr2 111941713 111941939 -141314644 - AluSc SINE Alu -1 308 72 1082 156 10 16 chr2 111941939 111942110 -141314473 - AluSc SINE Alu -19 290 119 661 83 0 0 chr2 111942110 111942194 -141314389 - AluY SINE Alu -16 295 212 1742 61 0 5 chr2 111942518 111942731 -141313852 - AluY SINE Alu -99 212 1 826 102 0 87 chr2 111942731 111942801 -141313782 - AluSc SINE Alu -165 144 88 2434 65 0 0 chr2 111942801 111943094 -141313489 - AluY SINE Alu -18 293 1 826 102 0 87 chr2 111943094 111943150 -141313433 - AluSc SINE Alu -221 88 29 587 119 0 0 chr2 111943150 111943234 -141313349 - AluSc SINE Alu -225 84 1 1299 205 51 53 chr2 111943235 111943342 -141313241 - Charlie1b DNA MER1_type -2316 445 339 2332 95 0 3 chr2 111943342 111943636 -141312947 - AluSq SINE Alu -20 293 1 1299 205 51 53 chr2 111943636 111943828 -141312755 - Charlie1b DNA MER1_type -2422 339 145 2165 109 0 10 chr2 111943828 111944130 -141312453 + AluSc SINE Alu 1 299 -10 1299 205 51 53 chr2 111944130 111944263 -141312320 - Charlie1b DNA MER1_type -2616 145 13 2157 122 0 13 chr2 111944410 111944713 -141311870 + AluSg SINE Alu 1 299 -11 2313 100 0 3 chr2 111945911 111946220 -141310363 - AluSc SINE Alu 0 309 2 2433 69 0 13 chr2 111946230 111946535 -141310048 - AluY SINE Alu -10 301 1 22 0 0 0 chr2 111946535 111946557 -141310026 + AT_rich Low_complexity Low_complexity 1 22 0 2280 78 7 3 chr2 111946717 111947012 -141309571 - AluSp SINE Alu -17 296 1 2105 125 0 7 chr2 111947023 111947319 -141309264 - AluSc SINE Alu -15 294 1 2389 63 27 3 chr2 111947503 111947804 -141308779 - AluY SINE Alu -3 308 1 425 195 39 0 chr2 111947858 111947935 -141308648 - AluJo/FRAM SINE Alu -35 277 198 279 159 0 0 chr2 111947936 111947980 -141308603 - Alu SINE Alu -256 44 1 1654 136 0 34 chr2 111948016 111948281 -141308302 - AluJo SINE Alu -56 256 1 382 292 42 48 chr2 111948702 111948824 -141307759 + L3 LINE CR1 374 496 -1081 2147 106 3 35 chr2 111948824 111949135 -141307448 + AluSx SINE Alu 1 301 -11 382 292 42 48 chr2 111949135 111949180 -141307403 + L3 LINE CR1 496 540 -1037 549 239 131 71 chr2 111949653 111950005 -141306578 - L1MC4a LINE L1 -1916 5892 5520 419 346 144 12 chr2 111950048 111950305 -141306278 - L3 LINE CR1 -78 1499 1209 1999 137 19 23 chr2 111950608 111950915 -141305668 - AluJb SINE Alu -6 306 1 1967 116 0 42 chr2 111950921 111951231 -141305352 - AluSx SINE Alu -12 300 4 198 348 136 0 chr2 111951804 111951922 -141304661 - L2 LINE L2 -2 3270 3137 1815 165 31 8 chr2 111952492 111952843 -141303740 - L1MB8 LINE L1 0 6178 5820 2183 97 7 26 chr2 111952917 111953226 -141303357 - AluY SINE Alu -8 303 1 237 220 34 0 chr2 111953881 111953940 -141302643 - L1ME4a LINE L1 -83 6038 5978 2227 110 3 7 chr2 111953996 111954304 -141302279 - AluSq SINE Alu -6 307 1 1636 156 0 8 chr2 111954312 111954575 -141302008 - AluJo SINE Alu -26 286 26 2190 103 10 0 chr2 111954575 111954865 -141301718 + AluSx SINE Alu 1 293 -19 227 216 0 0 chr2 111954865 111954902 -141301681 - AluJo SINE Alu -266 37 1 433 297 84 4 chr2 111954984 111955257 -141301326 - L1ME4a LINE L1 -294 5827 5533 1559 117 0 5 chr2 111955263 111955531 -141301052 - AluSg/x SINE Alu 0 336 70 202 164 73 73 chr2 111956850 111956905 -141299678 + MIR SINE MIR 187 241 -21 1572 92 0 88 chr2 111957200 111957450 -141299133 + AluY SINE Alu 1 228 -83 966 171 17 11 chr2 111958221 111958397 -141298186 - AluSg/x SINE Alu -2 310 134 267 263 0 0 chr2 111959317 111959397 -141297186 + A-rich Low_complexity Low_complexity 1 80 0 1671 170 34 14 chr2 111960026 111960320 -141296263 - AluJb SINE Alu -12 300 1 2228 99 0 0 chr2 111960348 111960652 -141295931 - AluSx SINE Alu 0 304 1 393 301 66 15 chr2 111961282 111961418 -141295165 + MIR3 SINE MIR 9 151 -57 1991 137 7 3 chr2 111962650 111962950 -141293633 + AluSx SINE Alu 3 303 -9 23 54 0 0 chr2 111963002 111963039 -141293544 + AT_rich Low_complexity Low_complexity 1 37 0 627 285 42 23 chr2 111963823 111964037 -141292546 - MIR SINE MIR -21 241 24 272 332 25 26 chr2 111964543 111964716 -141291867 - MIR SINE MIR -58 150 24 357 259 121 60 chr2 111964847 111965079 -141291504 - L1ME4a LINE L1 -103 6018 5773 31 0 0 0 chr2 111965749 111965780 -141290803 + AT_rich Low_complexity Low_complexity 1 31 0 180 111 0 0 chr2 111966713 111966740 -141289843 + (T)n Simple_repeat Simple_repeat 1 27 0 969 207 31 51 chr2 111967182 111967438 -141289145 + MIR SINE MIR 2 252 -10 198 143 0 0 chr2 111967438 111967473 -141289110 + (CAT)n Simple_repeat Simple_repeat 2 36 0 2075 145 0 3 chr2 111970150 111970460 -141286123 + AluSx SINE Alu 1 309 -3 331 319 106 0 chr2 111971573 111971714 -141284869 - MIR3 SINE MIR -8 200 45 883 193 0 7 chr2 111971883 111972033 -141284550 + FRAM SINE Alu 5 153 -13 1007 156 53 73 chr2 111972045 111972347 -141284236 - MER33 DNA MER1_type -45 279 1 686 69 0 0 chr2 111973161 111973248 -141283335 - AluY SINE Alu -223 87 1 256 348 54 22 chr2 111973807 111973899 -141282684 + MIR SINE MIR 36 130 -78 1857 165 0 3 chr2 111973951 111974242 -141282341 + AluSx SINE Alu 1 290 -22 2107 122 3 3 chr2 111974667 111974971 -141281612 - AluSg1 SINE Alu -5 304 1 2529 79 114 8 chr2 111975476 111975505 -141281078 - MLT2A1 LTR ERVL -8 436 411 269 26 0 26 chr2 111975505 111975544 -141281039 + (TGGA)n Simple_repeat Simple_repeat 1 38 0 2529 79 114 8 chr2 111975544 111975908 -141280675 - MLT2A1 LTR ERVL -33 411 1 21 57 0 0 chr2 111975920 111975955 -141280628 + AT_rich Low_complexity Low_complexity 1 35 0 253 270 35 43 chr2 111976337 111976452 -141280131 + MIR SINE MIR 69 182 -80 2332 89 10 3 chr2 111977119 111977422 -141279161 - AluY SINE Alu -6 305 1 231 293 93 13 chr2 111977874 111977949 -141278634 - MIR SINE MIR -180 82 2 301 244 87 17 chr2 111978024 111978139 -141278444 - L1MC5 LINE L1 -183 7778 7656 2135 112 7 3 chr2 111978181 111978475 -141278108 - AluSc SINE Alu -14 295 1 2249 109 10 3 chr2 111980208 111980512 -141276071 + AluSc SINE Alu 1 306 -3 340 259 142 70 chr2 111980887 111980958 -141275625 - L1MC5 LINE L1 -373 7588 7524 2061 113 30 3 chr2 111980958 111981259 -141275324 - AluSc SINE Alu 0 309 1 340 259 142 70 chr2 111981259 111981503 -141275080 - L1MC5 LINE L1 -437 7524 7250 518 225 238 0 chr2 111981607 111981758 -141274825 - MER5A DNA MER1_type -1 188 2 303 154 77 0 chr2 111981758 111981823 -141274760 - L1MC5 LINE L1 -623 7338 7269 291 228 123 87 chr2 111982553 111982631 -141273952 + L1MEd LINE L1 936 1010 -5119 2262 100 3 3 chr2 111982631 111982930 -141273653 + AluSq SINE Alu 1 299 -14 291 228 123 87 chr2 111982930 111983265 -141273318 + L1MEd LINE L1 1010 1357 -4772 362 254 36 29 chr2 111983726 111983820 -141272763 - MER112 DNA MER1_type -7 253 156 1421 198 6 53 chr2 111983820 111984138 -141272445 + AluJo SINE Alu 1 303 -9 362 254 36 29 chr2 111984138 111984181 -141272402 - MER112 DNA MER1_type -104 156 115 1054 205 156 19 chr2 111985451 111985856 -141270727 + MLT1E LTR MaLR 67 577 -16 238 196 0 0 chr2 111986034 111986085 -141270498 + L1ME1 LINE L1 5645 5695 -547 * 491 127 0 15 chr2 111986077 111986179 -141270404 + L1MB7 LINE L1 6079 6177 -1 * 1532 235 90 0 chr2 111986174 111986620 -141269963 + L1ME1 LINE L1 5676 6161 -5 1860 156 16 10 chr2 111987128 111987436 -141269147 + AluJb SINE Alu 1 310 -2 690 169 125 7 chr2 111988037 111988173 -141268410 + AluJb SINE Alu 137 288 -24 1979 52 0 0 chr2 111989740 111989971 -141266612 - AluY SINE Alu -11 300 70 2140 107 13 10 chr2 111990182 111990481 -141266102 + AluSc SINE Alu 1 300 -9 1940 141 3 10 chr2 111991083 111991381 -141265202 + AluSx SINE Alu 3 298 -14 278 306 196 10 chr2 111991907 111992088 -141264495 + MIR SINE MIR 3 225 -37 2276 74 10 26 chr2 111992088 111992397 -141264186 + AluY SINE Alu 1 304 -7 278 306 196 10 chr2 111992397 111992414 -141264169 + MIR SINE MIR 225 238 -24 182 205 51 0 chr2 111992615 111992654 -141263929 - MIR SINE MIR -138 70 30 1811 164 0 32 chr2 111992776 111993087 -141263496 - AluJb SINE Alu -11 301 1 2420 73 3 3 chr2 111993096 111993396 -141263187 - AluSc SINE Alu -9 300 1 687 135 8 40 chr2 111993415 111993541 -141263042 - FLAM_C SINE Alu 0 143 22 1980 106 46 3 chr2 111994325 111994607 -141261976 + AluSx SINE Alu 1 294 -18 1207 188 13 0 chr2 111994970 111995245 -141261338 + MER33 DNA MER1_type 1 272 -52 2391 68 0 0 chr2 111995245 111995538 -141261045 + AluY SINE Alu 1 293 -18 1065 169 0 0 chr2 111995954 111996131 -141260452 - AluSg/x SINE Alu -2 308 132 1870 138 24 10 chr2 111996131 111996429 -141260154 - AluSx SINE Alu 0 312 11 318 226 12 60 chr2 111996667 111996751 -141259832 + L1MD3 LINE L1 6483 6562 -1433 567 242 65 5 chr2 111996821 111997007 -141259576 - L1MD3 LINE L1 -53 7942 7746 262 179 0 0 chr2 111997018 111997074 -141259509 - L1MD3 LINE L1 -359 7636 7581 2710 165 12 34 chr2 111997082 111997794 -141258789 + L1MCb LINE L1 721 1447 -4926 2503 84 0 0 chr2 111997794 111998105 -141258478 + AluY SINE Alu 1 311 0 2710 165 12 34 chr2 111998105 111998165 -141258418 + L1MCb LINE L1 1447 1481 -4892 1623 189 55 3 chr2 111998165 111998508 -141258075 + MLT1A1 LTR MaLR 2 362 -3 2710 165 12 34 chr2 111998508 111998550 -141258033 + L1MCb LINE L1 1481 1522 -4851 21 0 0 0 chr2 111999368 111999389 -141257194 + AT_rich Low_complexity Low_complexity 1 21 0 2261 102 7 0 chr2 111999396 111999689 -141256894 + AluSp SINE Alu 2 296 -17 1040 220 64 7 chr2 112000039 112000321 -141256262 - L1M4 LINE L1 -557 5617 5320 1386 237 122 2 chr2 112000327 112000804 -141255779 - L1MD2 LINE L1 -15 6344 5811 189 74 0 0 chr2 112000997 112001024 -141255559 + (T)n Simple_repeat Simple_repeat 1 27 0 2143 81 53 0 chr2 112001464 112001747 -141254836 - AluY SINE Alu -13 298 1 3496 155 28 5 chr2 112001884 112002523 -141254060 + Tigger2 DNA MER2_type 2 655 -2063 4980 201 41 21 chr2 112002523 112003219 -141253364 + L1MCb LINE L1 2891 3626 -2938 2333 116 3 0 chr2 112003219 112003530 -141253053 + AluSp SINE Alu 1 312 -1 4980 201 41 21 chr2 112003530 112004125 -141252458 + L1MCb LINE L1 3626 4208 -2356 2099 123 0 0 chr2 112004125 112004439 -141252144 + AluSx SINE Alu 1 314 0 2314 124 92 5 chr2 112004456 112004867 -141251716 + L1MA2 LINE L1 5851 6297 -7 2095 116 0 10 chr2 112004871 112005163 -141251420 - AluSg SINE Alu -7 303 15 3150 195 20 3 chr2 112005176 112005874 -141250709 + L1 LINE L1 2253 2962 -3184 2131 112 0 42 chr2 112005874 112006020 -141250563 + AluSc SINE Alu 1 129 -180 3928 111 9 46 chr2 112006020 112006649 -141249934 - LTR14B LTR ERVK 0 608 3 2131 112 0 42 chr2 112006649 112006815 -141249768 + AluSc SINE Alu 129 300 -9 2437 190 40 22 chr2 112006815 112007061 -141249522 + L1 LINE L1 2952 3192 -2954 2227 102 36 7 chr2 112007061 112007364 -141249219 + AluSp SINE Alu 1 312 -1 2437 190 40 22 chr2 112007364 112007801 -141248782 + L1 LINE L1 3192 3647 -2499 1299 154 11 113 chr2 112007801 112008431 -141248152 - MER4C LTR ERV1 0 465 1 2271 174 58 31 chr2 112008431 112008660 -141247923 + L1 LINE L1 3644 3865 -2281 1666 155 50 24 chr2 112008660 112008957 -141247626 + AluJb SINE Alu 1 305 -7 2271 174 58 31 chr2 112008957 112009278 -141247305 + L1 LINE L1 3865 4209 -1937 891 112 240 5 chr2 112009278 112009474 -141247109 + MER21A LTR ERV1 24 265 -666 2387 154 26 89 chr2 112009479 112010065 -141246518 + MER21A LTR ERV1 377 925 -6 441 200 52 9 chr2 112010085 112010200 -141246383 + L1MA5 LINE L1 3535 3654 -2492 517 148 0 0 chr2 112010201 112010282 -141246301 - MER4C LTR ERV1 -8 457 377 5591 143 16 18 chr2 112010324 112011739 -141244844 + L1MA5 LINE L1 4264 5687 -613 24 0 0 0 chr2 112012306 112012330 -141244253 + AT_rich Low_complexity Low_complexity 1 24 0 2006 102 84 0 chr2 112012553 112012827 -141243756 + AluSg SINE Alu 1 297 -13 3733 130 16 2 chr2 112014080 112014696 -141241887 + L1MA5 LINE L1 5676 6300 0 3231 223 46 107 chr2 112014701 112015375 -141241208 - L1M4 LINE L1 -1286 5096 4383 2082 143 0 0 chr2 112015375 112015669 -141240914 - AluSx SINE Alu -18 294 1 931 135 0 0 chr2 112015676 112015809 -141240774 - FLAM_C SINE Alu -10 133 1 3231 223 46 107 chr2 112015809 112016005 -141240578 - L1M4 LINE L1 -2005 4377 4171 2047 112 0 7 chr2 112016005 112016332 -141240251 - AluSx SINE Alu 0 325 1 3231 223 46 107 chr2 112016332 112016542 -141240041 - L1M4 LINE L1 -2211 4171 3950 2310 88 3 0 chr2 112016542 112016837 -141239746 - AluSx SINE Alu -16 296 1 3231 223 46 107 chr2 112016837 112017309 -141239274 - L1M4 LINE L1 -2432 3950 3504 180 77 0 0 chr2 112017601 112017627 -141238956 + (T)n Simple_repeat Simple_repeat 1 26 0 3356 211 47 13 chr2 112018225 112019836 -141236747 - L1M4 LINE L1 -2847 3535 1770 2102 134 3 0 chr2 112020103 112020410 -141236173 + AluSg SINE Alu 1 308 -2 1202 143 0 46 chr2 112020735 112020931 -141235652 + AluJb SINE Alu 1 187 -125 648 261 26 49 chr2 112021039 112021384 -141235199 - L1ME4a LINE L1 -248 5873 5537 26 30 0 0 chr2 112021405 112021438 -141235145 + AT_rich Low_complexity Low_complexity 1 33 0 2498 180 63 41 chr2 112021632 112021692 -141234891 - MLT2B3 LTR ERVL 0 554 497 682 32 21 0 chr2 112021692 112021785 -141234798 + (TAGA)n Simple_repeat Simple_repeat 2 96 0 2498 180 63 41 chr2 112021785 112022262 -141234321 - MLT2B3 LTR ERVL -57 497 5 772 215 118 0 chr2 112022664 112022859 -141233724 - MER20 DNA MER1_type -1 218 1 186 356 50 38 chr2 112024120 112024381 -141232202 - L2 LINE L2 -428 2886 2623 1472 239 17 3 chr2 112024561 112024917 -141231666 - MLT1A1 LTR MaLR -2 363 3 248 313 96 35 chr2 112026490 112026605 -141229978 - L2 LINE L2 -13 3300 3179 573 276 70 26 chr2 112026836 112027064 -141229519 + MIR SINE MIR 20 257 -5 231 36 0 0 chr2 112029147 112029175 -141227408 + (GA)n Simple_repeat Simple_repeat 1 28 0 404 332 140 28 chr2 112031516 112032342 -141224241 - L2 LINE L2 -48 3265 2348 2099 94 3 30 chr2 112032617 112032916 -141223667 + AluSc SINE Alu 1 291 -18 2132 70 42 3 chr2 112032980 112033290 -141223293 + AluY SINE Alu 1 311 0 247 281 22 45 chr2 112033314 112033403 -141223180 - MIR3 SINE MIR -38 170 84 32 0 0 0 chr2 112033657 112033689 -141222894 + AT_rich Low_complexity Low_complexity 1 32 0 857 176 103 2 chr2 112034527 112034762 -141221821 + L1MC3 LINE L1 6049 7761 -24 378 206 0 0 chr2 112034915 112034988 -141221595 - MER5A DNA MER1_type -77 112 40 1964 135 7 0 chr2 112035327 112035623 -141220960 + AluSx SINE Alu 1 298 -14 341 284 112 67 chr2 112037651 112037833 -141218750 - MIR SINE MIR -1 261 50 898 261 9 5 chr2 112038290 112038505 -141218078 - MER58A DNA MER1_type -6 218 3 190 250 78 0 chr2 112038530 112038594 -141217989 + MIR SINE MIR 184 252 -10 1937 137 3 15 chr2 112039133 112039470 -141217113 - MER9 LTR ERVK 0 511 179 699 102 0 0 chr2 112039473 112039571 -141217012 + AluY SINE Alu 214 311 0 1299 82 22 0 chr2 112039571 112039754 -141216829 - MER9 LTR ERVK -324 187 1 30106 96 8 3 chr2 112039776 112044389 -141212194 - HERVK9 LTR ERVK -31 8033 1348 3662 100 25 31 chr2 112044390 112045001 -141211582 - HERVK9 LTR ERVK -5305 611 5 427 129 95 17 chr2 112045004 112045120 -141211463 - MER9 LTR ERVK 0 511 387 1704 113 113 0 chr2 112045281 112045537 -141211046 - AluSg SINE Alu -6 304 20 226 211 0 0 chr2 112046163 112046201 -141210382 + AluJ/monomer SINE Alu 1 38 -264 444 272 115 113 chr2 112046776 112049562 -141207021 + L1M2 LINE L1 368 1454 -5395 2333 113 0 0 chr2 112049701 112050012 -141206571 + AluSx SINE Alu 2 312 0 186 283 106 26 chr2 112050196 112050309 -141206274 + L2 LINE L2 2200 2321 -993 2803 151 14 6 chr2 112051020 112051522 -141205061 - MER9 LTR ERVK -5 506 1 2058 183 0 3 chr2 112051734 112052100 -141204483 - MLT1A1 LTR MaLR 0 365 1 201 39 0 0 chr2 112052232 112052258 -141204325 + (TG)n Simple_repeat Simple_repeat 1 26 0 978 217 75 99 chr2 112052400 112052774 -141203809 - MLT1A1 LTR MaLR 0 365 1 3549 175 12 0 chr2 112053574 112054247 -141202336 + L1PB4 LINE L1 5474 6154 -2 23 0 0 0 chr2 112054677 112054700 -141201883 + AT_rich Low_complexity Low_complexity 1 23 0 252 0 0 0 chr2 112054703 112054731 -141201852 + (TC)n Simple_repeat Simple_repeat 2 29 0 189 0 0 0 chr2 112054730 112054751 -141201832 + (TA)n Simple_repeat Simple_repeat 2 22 0 * 28 0 0 0 chr2 112054828 112054856 -141201727 + AT_rich Low_complexity Low_complexity 1 28 0 3332 100 13 0 chr2 112055163 112055641 -141200942 + LTR19A LTR ERV1 1 484 -2 1217 160 19 102 chr2 112056114 112056439 -141200144 + L1MA9 LINE L1 6010 6307 -5 553 248 0 7 chr2 112056727 112056868 -141199715 - LTR33 LTR ERVL -30 491 352 352 152 0 47 chr2 112056941 112057033 -141199550 + L1M4 LINE L1 5662 5746 -434 * 2017 163 30 76 chr2 112057025 112057552 -141199031 + L1MB8 LINE L1 5675 6177 -1 304 335 13 26 chr2 112057617 112057769 -141198814 + L1ME LINE L1 92 241 -6618 1580 252 51 30 chr2 112058395 112059121 -141197462 + L1ME LINE L1 1284 2024 -4831 2648 224 58 32 chr2 112059184 112060343 -141196240 + L1ME LINE L1 5170 6357 -620 24 0 0 0 chr2 112061470 112061494 -141195089 + AT_rich Low_complexity Low_complexity 1 24 0 411 286 32 78 chr2 112062838 112062992 -141193591 + MIR SINE MIR 21 167 -95 2082 159 48 17 chr2 112062992 112063407 -141193176 - MSTA LTR MaLR 0 428 1 449 62 15 0 chr2 112066281 112066346 -141190237 + (TA)n Simple_repeat Simple_repeat 2 67 0 201 175 0 25 chr2 112066574 112066614 -141189969 + L2 LINE L2 3266 3304 -9 643 228 9 10 chr2 112067923 112068236 -141188347 + L1MC4 LINE L1 6351 6621 -1164 22 0 0 0 chr2 112068337 112068359 -141188224 + AT_rich Low_complexity Low_complexity 1 22 0 3249 214 25 61 chr2 112068434 112069465 -141187118 + L1MC3 LINE L1 6612 7605 -180 1347 247 25 25 chr2 112069442 112070008 -141186575 + L1M4 LINE L1 2839 3404 -2742 * 30 0 0 0 chr2 112070008 112070038 -141186545 + AT_rich Low_complexity Low_complexity 1 30 0 7401 28 1 0 chr2 112070038 112071682 -141184901 - L1PA3 LINE L1 0 6155 4511 * 13051 22 0 0 chr2 112071677 112073982 -141182601 + L1PA3 LINE L1 3850 6155 0 1168 280 37 42 chr2 112075746 112076264 -141180319 + L1ME2 LINE L1 329 843 -5529 1800 245 84 21 chr2 112076441 112076643 -141179940 + L1ME LINE L1 1940 2128 -4254 1251 108 65 0 chr2 112076643 112076828 -141179755 - MER107 DNA MER1_type 0 197 1 1800 245 84 21 chr2 112076828 112077825 -141178758 + L1ME LINE L1 2128 3211 -3171 1329 206 36 97 chr2 112078055 112078782 -141177801 + L1M4 LINE L1 831 1527 -5015 * 1400 265 55 23 chr2 112078780 112079477 -141177106 + L1M4 LINE L1 2832 3550 -3094 590 279 101 0 chr2 112079619 112079838 -141176745 - MLT1-int LTR MaLR -641 730 490 360 260 87 7 chr2 112079838 112079988 -141176595 - MLT1B LTR MaLR -228 162 1 216 0 0 0 chr2 112080002 112080026 -141176557 + (CA)n Simple_repeat Simple_repeat 1 24 0 716 219 32 41 chr2 112080036 112080255 -141176328 + L1M4c LINE L1 2277 2493 -3891 1643 221 41 2 chr2 112080307 112080701 -141175882 + L1MB5 LINE L1 5758 6166 -8 663 239 82 19 chr2 112080790 112081057 -141175526 + L1ME2 LINE L1 894 1193 -5179 6672 84 1 0 chr2 112081057 112082488 -141174095 + L1PA7 LINE L1 4724 6154 0 663 239 82 19 chr2 112082488 112082596 -141173987 + L1ME2 LINE L1 1193 1293 -5079 831 267 83 48 chr2 112082737 112083738 -141172845 + L1ME2 LINE L1 5201 6390 -10 252 0 0 0 chr2 112083745 112083773 -141172810 + (TA)n Simple_repeat Simple_repeat 1 28 0 27 73 0 0 chr2 112084455 112084510 -141172073 + AT_rich Low_complexity Low_complexity 1 55 0 242 261 87 0 chr2 112084590 112084659 -141171924 + MIR SINE MIR 34 108 -100 371 320 73 93 chr2 112084828 112085087 -141171496 - L2 LINE L2 -30 3242 2989 1402 209 36 0 chr2 112085604 112085905 -141170678 + MER2 DNA MER2_type 34 345 0 275 317 44 55 chr2 112086072 112086255 -141170328 + MER5A DNA MER1_type 9 189 0 185 263 0 0 chr2 112086476 112086514 -141170069 - MER5A DNA MER1_type -142 47 10 180 0 0 0 chr2 112086606 112086626 -141169957 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2195 102 0 0 chr2 112086628 112086912 -141169671 - AluSx SINE Alu -28 284 1 343 322 63 7 chr2 112087073 112087216 -141169367 + L2 LINE L2 3163 3313 0 264 59 0 0 chr2 112087929 112087963 -141168620 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 262 284 18 0 chr2 112088527 112088636 -141167947 + (TA)n Simple_repeat Simple_repeat 2 112 0 210 250 12 36 chr2 112089476 112089560 -141167023 + (CCCCG)n Simple_repeat Simple_repeat 3 84 0 182 91 30 0 chr2 112090064 112090097 -141166486 + A-rich Low_complexity Low_complexity 2 35 0 186 43 0 0 chr2 112090209 112090232 -141166351 + (CAA)n Simple_repeat Simple_repeat 2 24 0 21 36 0 0 chr2 112090497 112090525 -141166058 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 112091318 112091342 -141165241 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr2 112092698 112092721 -141163862 + AT_rich Low_complexity Low_complexity 1 23 0 759 223 187 0 chr2 112094633 112094906 -141161677 - MER33 DNA MER1_type 0 324 1 24 53 0 0 chr2 112096592 112096630 -141159953 + AT_rich Low_complexity Low_complexity 1 38 0 2474 63 0 10 chr2 112097157 112097460 -141159123 + AluY SINE Alu 1 300 -11 1183 160 15 0 chr2 112097893 112098093 -141158490 - Tigger3(Golem) DNA MER2_type -12 3017 2815 439 282 17 0 chr2 112098085 112098202 -141158381 - Tigger3(Golem) DNA MER2_type -2909 120 2 * 207 0 0 0 chr2 112098300 112098323 -141158260 + (GA)n Simple_repeat Simple_repeat 1 23 0 * 315 0 0 0 chr2 112098322 112098357 -141158226 + (TG)n Simple_repeat Simple_repeat 1 35 0 597 233 0 0 chr2 112098357 112098486 -141158097 + L1PB4 LINE L1 6026 6154 -2 1834 161 9 18 chr2 112100009 112100345 -141156238 + MER7A DNA MER2_type 16 346 0 216 179 15 30 chr2 112101348 112101415 -141155168 + (TTA)n Simple_repeat Simple_repeat 1 66 0 40 37 0 0 chr2 112103272 112103326 -141153257 + AT_rich Low_complexity Low_complexity 1 54 0 734 206 0 0 chr2 112103326 112103452 -141153131 - FLAM_C SINE Alu -16 127 2 1788 176 0 0 chr2 112103454 112103749 -141152834 - AluJb SINE Alu -16 296 2 23 0 0 0 chr2 112103752 112103775 -141152808 + AT_rich Low_complexity Low_complexity 1 23 0 982 127 7 0 chr2 112103778 112103920 -141152663 - AluSg/x SINE Alu -6 304 162 186 43 0 0 chr2 112104061 112104084 -141152499 + (TG)n Simple_repeat Simple_repeat 2 24 0 314 107 18 0 chr2 112104098 112104154 -141152429 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 2662 20 7 0 chr2 112104247 112104552 -141152031 + AluYa5 SINE Alu 1 307 -4 659 202 0 8 chr2 112105589 112105718 -141150865 + FLAM_C SINE Alu 1 128 -5 197 284 34 34 chr2 112106203 112106291 -141150292 + MIR3 SINE MIR 112 199 -9 1363 213 29 14 chr2 112106640 112106987 -141149596 - MLT1A1 LTR MaLR -4 361 10 246 253 172 0 chr2 112107390 112107477 -141149106 - L2 LINE L2 -35 3237 3136 197 180 0 80 chr2 112107527 112107577 -141149006 - L2 LINE L2 0 3313 3268 242 324 90 0 chr2 112108182 112108293 -141148290 + L2 LINE L2 3178 3298 -15 1469 183 103 26 chr2 112108517 112108856 -141147727 - MLT1A1 LTR MaLR 0 365 1 1041 105 0 0 chr2 112109348 112109481 -141147102 - AluSq/x SINE Alu -179 133 1 391 263 62 78 chr2 112109582 112109761 -141146822 - MER5B DNA MER1_type 0 178 3 366 42 0 0 chr2 112110431 112110479 -141146104 + (TG)n Simple_repeat Simple_repeat 2 49 0 21 0 0 0 chr2 112111723 112111744 -141144839 + AT_rich Low_complexity Low_complexity 1 21 0 223 111 0 44 chr2 112112211 112112256 -141144327 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 3217 83 7 15 chr2 112112292 112112751 -141143832 - L1PA8A LINE L1 0 6131 5677 22 0 0 0 chr2 112113901 112113923 -141142660 + AT_rich Low_complexity Low_complexity 1 22 0 264 59 0 0 chr2 112115126 112115160 -141141423 + (TG)n Simple_repeat Simple_repeat 2 35 0 24 53 0 0 chr2 112116922 112116960 -141139623 + AT_rich Low_complexity Low_complexity 1 38 0 243 108 27 0 chr2 112117451 112117488 -141139095 - tRNA-Lys-AAG tRNA tRNA -37 39 2 1086 0 0 0 chr2 112118517 112118645 -141137938 - L1HS LINE L1 0 6155 6028 318 266 21 91 chr2 112118740 112118883 -141137700 + MIR SINE MIR 11 143 -119 23 78 0 0 chr2 112119970 112120021 -141136562 + AT_rich Low_complexity Low_complexity 1 51 0 271 372 55 6 chr2 112120249 112120413 -141136170 + MIR3 SINE MIR 33 204 -4 417 174 165 52 chr2 112120960 112121075 -141135508 + FRAM SINE Alu 30 157 -19 672 265 48 12 chr2 112121353 112121519 -141135064 + MER5B DNA MER1_type 1 172 -6 587 227 45 28 chr2 112121851 112122027 -141134556 + L1MC5 LINE L1 6693 6871 -1090 2081 253 24 20 chr2 112122153 112122913 -141133670 + L1MDb LINE L1 660 1422 -4987 244 188 0 31 chr2 112122942 112123006 -141133577 + MADE1 DNA Mariner 1 62 -18 248 235 73 0 chr2 112123006 112123074 -141133509 + L1MDb LINE L1 1456 1528 -4878 648 235 22 16 chr2 112123081 112123264 -141133319 + L1MDb LINE L1 1630 1813 -4593 677 226 35 75 chr2 112123273 112123474 -141133109 + L1MDb LINE L1 2004 2189 -4217 1535 176 3 27 chr2 112123474 112123775 -141132808 - AluJo SINE Alu -3 309 16 677 226 35 75 chr2 112123775 112123892 -141132691 + L1MDb LINE L1 2189 2309 -4097 386 169 0 13 chr2 112123966 112124043 -141132540 + L1MD2 LINE L1 6057 6132 -227 1198 303 19 9 chr2 112124101 112124520 -141132063 - LTR68 LTR ERV1 -133 607 185 384 322 28 22 chr2 112124524 112124704 -141131879 - HERV16 LTR ERVL -3449 1547 1367 816 246 10 5 chr2 112124852 112125055 -141131528 - HERV16 LTR ERVL -3811 1185 982 317 350 29 29 chr2 112125217 112125626 -141130957 + HERVL LTR ERVL 4930 5338 -316 183 303 48 76 chr2 112125736 112125881 -141130702 - L3 LINE CR1 -96 1481 1341 21 0 0 0 chr2 112125883 112125904 -141130679 + AT_rich Low_complexity Low_complexity 1 21 0 440 192 1 1 chr2 112128964 112129062 -141127521 + L1MB1 LINE L1 5821 5918 -246 21 0 0 0 chr2 112129428 112129449 -141127134 + AT_rich Low_complexity Low_complexity 1 21 0 28 29 0 0 chr2 112130988 112131023 -141125560 + AT_rich Low_complexity Low_complexity 1 35 0 649 181 15 23 chr2 112131039 112131172 -141125411 - FLAM_C SINE Alu 0 143 12 2237 89 3 17 chr2 112131288 112131590 -141124993 + AluSc SINE Alu 1 298 -11 24 0 0 0 chr2 112131935 112131959 -141124624 + AT_rich Low_complexity Low_complexity 1 24 0 394 165 299 0 chr2 112131969 112132066 -141124517 - MER2 DNA MER2_type -219 126 1 365 253 60 29 chr2 112133615 112133811 -141122772 + L1MB8 LINE L1 5895 6098 -80 799 156 179 6 chr2 112133987 112134166 -141122417 + MER2 DNA MER2_type 1 210 -135 27 0 0 0 chr2 112134917 112134944 -141121639 + AT_rich Low_complexity Low_complexity 1 27 0 231 167 0 0 chr2 112136142 112136184 -141120399 + (CA)n Simple_repeat Simple_repeat 2 43 0 241 370 92 35 chr2 112136770 112137054 -141119529 - L2 LINE L2 -2657 657 358 6777 139 104 62 chr2 112137894 112139512 -141117071 + pTR5 LTR ERV1 742 2428 -10 283 325 160 5 chr2 112140215 112140403 -141116180 - MIR SINE MIR -3 259 43 293 98 49 0 chr2 112141404 112141465 -141115118 + T-rich Low_complexity Low_complexity 2 65 0 298 326 234 0 chr2 112142039 112142180 -141114403 + MER5A DNA MER1_type 8 181 -8 266 297 11 33 chr2 112142196 112142287 -141114296 - MER5B DNA MER1_type 0 178 90 4754 122 17 0 chr2 112142467 112143236 -141113347 - L1PA12 LINE L1 0 6168 5387 8020 158 2 3 chr2 112143259 112144708 -141111875 - L1PA12 LINE L1 -877 5269 3822 4956 172 15 23 chr2 112144709 112145602 -141110981 + L1P LINE L1 2780 3665 -2481 456 19 0 0 chr2 112145602 112145655 -141110928 + (CA)n Simple_repeat Simple_repeat 2 54 0 4956 172 15 23 chr2 112145655 112145823 -141110760 + L1P LINE L1 3665 3833 -2313 412 269 54 12 chr2 112146843 112147010 -141109573 + LTR33A LTR ERVL 347 520 -3 225 319 0 44 chr2 112147014 112147105 -141109478 + L2 LINE L2 3186 3272 0 706 249 29 29 chr2 112147350 112147657 -141108926 + L1MDa LINE L1 1685 1994 -4546 482 225 100 17 chr2 112147657 112147777 -141108806 + FLAM_A SINE Alu 1 130 -3 706 249 29 29 chr2 112147777 112147814 -141108769 + L1MDa LINE L1 1993 2029 -4511 2178 138 16 30 chr2 112147814 112148183 -141108400 + THE1B LTR MaLR 1 364 0 4947 149 32 57 chr2 112148196 112149578 -141107005 + THE1B-int LTR MaLR 342 1651 0 2018 134 42 25 chr2 112149578 112149936 -141106647 + THE1B LTR MaLR 1 364 0 427 297 52 26 chr2 112149961 112150707 -141105876 + L1MDa LINE L1 2056 2828 -3712 * 1061 276 75 18 chr2 112150700 112151261 -141105322 + L1MDa LINE L1 4234 4826 -1714 4413 150 4 4 chr2 112151265 112152023 -141104560 - HSMAR2 DNA Mariner 0 1302 545 2376 183 47 30 chr2 112152158 112152694 -141103889 - HSMAR2 DNA Mariner -757 545 1 879 243 140 16 chr2 112152699 112153136 -141103447 + L1MDa LINE L1 4834 5324 -1216 334 319 29 36 chr2 112153146 112153284 -141103299 + L1ME1 LINE L1 6009 6145 -21 26 74 0 0 chr2 112153514 112153568 -141103015 + AT_rich Low_complexity Low_complexity 1 54 0 390 231 104 8 chr2 112153602 112153736 -141102847 - LTR33 LTR ERVL 0 521 375 1560 311 52 30 chr2 112153909 112154038 -141102545 - ERVL LTR ERVL -443 5321 5196 222 62 0 0 chr2 112154038 112154070 -141102513 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1560 311 52 30 chr2 112154070 112154843 -141101740 - ERVL LTR ERVL -568 5196 4399 180 0 0 0 chr2 112157043 112157063 -141099520 + (A)n Simple_repeat Simple_repeat 1 20 0 303 267 78 11 chr2 112157571 112157661 -141098922 - L2 LINE L2 -8 3305 3210 195 308 93 37 chr2 112160793 112160900 -141095683 - L2 LINE L2 -21 3251 3139 743 241 160 11 chr2 112161014 112161296 -141095287 + MER5C DNA MER1_type 1 324 0 408 356 40 0 chr2 112161495 112161644 -141094939 - MIR SINE MIR -24 238 84 686 186 8 0 chr2 112162884 112163002 -141093581 - FLAM_A SINE Alu -14 119 1 620 230 5 84 chr2 112163897 112164088 -141092495 + MER5B DNA MER1_type 1 176 -2 886 211 16 5 chr2 112165782 112165967 -141090616 + MER5A DNA MER1_type 1 187 -2 438 326 55 0 chr2 112167315 112167496 -141089087 + MIR SINE MIR 40 230 -32 180 236 18 36 chr2 112167721 112167776 -141088807 - L3 LINE CR1 -4 1573 1520 279 288 0 0 chr2 112168527 112168593 -141087990 + MER5B DNA MER1_type 1 66 -112 1698 286 82 19 chr2 112168610 112169820 -141086763 + L1M4 LINE L1 2757 4078 -2068 2289 31 0 0 chr2 112169897 112170188 -141086395 - L1PA5 LINE L1 -996 5150 4860 7456 30 7 1 chr2 112170188 112171175 -141085408 + L1PA5 LINE L1 5152 6143 -11 39 22 0 0 chr2 112171175 112171221 -141085362 + AT_rich Low_complexity Low_complexity 1 46 0 279 0 0 0 chr2 112172140 112172171 -141084412 + (CA)n Simple_repeat Simple_repeat 2 32 0 * 306 0 0 0 chr2 112172170 112172204 -141084379 + (GA)n Simple_repeat Simple_repeat 2 35 0 1426 142 43 14 chr2 112172701 112172983 -141083600 + L1MA8 LINE L1 5999 6288 -3 328 296 0 0 chr2 112174600 112174688 -141081895 + MER81 DNA DNA 1 88 -26 263 274 21 42 chr2 112174833 112174928 -141081655 + MIR3 SINE MIR 99 191 -17 244 306 78 78 chr2 112175097 112175339 -141081244 - MIR SINE MIR 0 262 21 * 553 293 78 24 chr2 112175286 112175491 -141081092 + MIR SINE MIR 16 231 -31 180 346 0 0 chr2 112175593 112175645 -141080938 + MIR SINE MIR 43 94 -114 237 282 82 0 chr2 112176097 112176182 -141080401 + L1ME LINE L1 5604 5695 -426 609 290 6 6 chr2 112177045 112177207 -141079376 - MIR SINE MIR -93 169 8 2357 96 0 0 chr2 112177448 112177749 -141078834 - AluSg SINE Alu -9 301 1 22 35 0 0 chr2 112177780 112177809 -141078774 + AT_rich Low_complexity Low_complexity 1 29 0 262 289 19 29 chr2 112179274 112179378 -141077205 - LTR33 LTR ERVL -300 221 119 264 254 201 58 chr2 112180380 112180569 -141076014 - MIR SINE MIR -2 260 45 275 261 27 54 chr2 112181118 112181229 -141075354 + MIR SINE MIR 84 191 -71 332 301 8 16 chr2 112182092 112182215 -141074368 + MIR3 SINE MIR 86 207 -1 317 311 9 19 chr2 112183130 112183162 -141073421 - MER81 DNA DNA 0 114 83 7574 30 0 0 chr2 112183162 112184224 -141072359 - L1PA4 LINE L1 0 6155 5093 317 311 9 19 chr2 112184224 112184297 -141072286 - MER81 DNA DNA -31 83 10 377 238 48 0 chr2 112184298 112184382 -141072201 - MER81 DNA DNA -26 88 1 488 333 79 45 chr2 112184620 112185103 -141071480 - L2 LINE L2 -850 2464 1966 5653 96 24 7 chr2 112185370 112186247 -141070336 - L1PA13 LINE L1 0 6163 5272 1562 167 3 13 chr2 112186241 112186467 -141070116 + L1P LINE L1 4959 5183 -963 * 183 42 0 0 chr2 112186467 112186491 -141070092 + (CAA)n Simple_repeat Simple_repeat 2 25 0 1562 167 3 13 chr2 112186491 112186582 -141070001 + L1P LINE L1 5183 5273 -873 2482 104 31 8 chr2 112186659 112187015 -141069568 + THE1B LTR MaLR 1 364 0 335 310 123 35 chr2 112187239 112187410 -141069173 - MIR3 SINE MIR -3 205 20 1673 277 96 32 chr2 112188832 112191054 -141065529 - L1MEc LINE L1 -2996 3219 897 255 369 42 32 chr2 112191354 112191758 -141064825 - L1MEc LINE L1 -5952 444 37 249 402 9 0 chr2 112191884 112191996 -141064587 + MIR3 SINE MIR 78 190 -18 3774 123 19 12 chr2 112192050 112192695 -141063888 - L1MA1 LINE L1 0 7721 7073 2763 71 8 0 chr2 112192700 112193052 -141063531 + THE1A LTR MaLR 1 355 0 11415 110 2 1 chr2 112193052 112194631 -141061952 + THE1A-int LTR MaLR 1 1580 0 2501 109 14 0 chr2 112194631 112194981 -141061602 + THE1A LTR MaLR 1 355 0 10581 178 14 2 chr2 112194982 112197520 -141059063 - L1MA1 LINE L1 -653 7070 4499 8903 199 75 18 chr2 112197526 112199400 -141057183 - L1MA1 LINE L1 -5571 1994 15 392 338 15 0 chr2 112199823 112199956 -141056627 - L2 LINE L2 0 3313 3179 6706 237 60 11 chr2 112200261 112203286 -141053297 + L1MB5 LINE L1 2699 5877 -297 2269 61 3 79 chr2 112203286 112203615 -141052968 + AluY SINE Alu 1 304 -7 6706 237 60 11 chr2 112203615 112203889 -141052694 + L1MB5 LINE L1 5877 6136 -38 1454 178 110 51 chr2 112205980 112206223 -141050360 - L1MA9 LINE L1 -38 6274 5994 2532 142 54 7 chr2 112206223 112206687 -141049896 - LTR19A LTR ERV1 0 486 1 1454 178 110 51 chr2 112206687 112206871 -141049712 - L1MA9 LINE L1 -318 5994 5822 594 338 48 0 chr2 112207109 112207316 -141049267 - MIR SINE MIR -22 240 24 30 27 0 0 chr2 112208150 112208187 -141048396 + AT_rich Low_complexity Low_complexity 1 37 0 1725 169 3 26 chr2 112208388 112208690 -141047893 + AluJb SINE Alu 1 295 -17 210 259 0 17 chr2 112208823 112208881 -141047702 + GA-rich Low_complexity Low_complexity 2 58 0 650 216 83 70 chr2 112209028 112209426 -141047157 + L1MC5 LINE L1 7524 7926 -35 2313 122 0 0 chr2 112209436 112209748 -141046835 + AluSq SINE Alu 1 312 -1 1905 160 0 0 chr2 112209748 112210041 -141046542 + AluSx SINE Alu 1 293 -19 643 323 85 26 chr2 112210340 112210906 -141045677 - ERVL LTR ERVL -1836 3928 3330 457 233 25 69 chr2 112213888 112214001 -141042582 - MLT1E LTR MaLR -132 461 355 6089 105 4 4 chr2 112214001 112215210 -141041373 - L1PA11 LINE L1 -2 6172 4943 457 233 25 69 chr2 112215210 112215255 -141041328 - MLT1E LTR MaLR -238 355 310 10427 216 29 45 chr2 112215256 112219080 -141037503 - L1PA12 LINE L1 -2715 4869 11 713 279 124 27 chr2 112219081 112219411 -141037172 - MLT1E LTR MaLR -231 362 1 667 299 29 21 chr2 112219840 112220081 -141036502 + MIR SINE MIR 19 261 -1 35 0 0 0 chr2 112220390 112220425 -141036158 + AT_rich Low_complexity Low_complexity 1 35 0 502 376 92 6 chr2 112221046 112221315 -141035268 - L3 LINE CR1 -72 1505 1202 2368 173 24 2 chr2 112221315 112221732 -141034851 - MSTB LTR MaLR 0 426 1 502 376 92 6 chr2 112221732 112221789 -141034794 - L3 LINE CR1 -375 1202 1151 472 289 87 10 chr2 112221882 112222090 -141034493 + MER90 LTR ERV1 143 366 -248 1136 169 17 10 chr2 112222090 112222346 -141034237 + L1MB8 LINE L1 5704 5926 -258 1090 177 8 28 chr2 112222458 112222625 -141033958 + L1MB8 LINE L1 5926 6088 -90 1943 222 126 6 chr2 112222625 112223124 -141033459 - MER89 LTR ERV1 0 559 1 1090 177 8 28 chr2 112223124 112223205 -141033378 + L1MB8 LINE L1 6088 6169 -9 451 304 50 6 chr2 112223235 112223416 -141033167 + MER90 LTR ERV1 369 557 -57 206 287 106 21 chr2 112223505 112223599 -141032984 - L3 LINE CR1 -510 1067 966 1800 145 8 78 chr2 112223719 112224091 -141032492 + MER7A DNA MER2_type 2 345 -1 213 139 0 0 chr2 112224092 112224135 -141032448 + (TG)n Simple_repeat Simple_repeat 2 44 0 968 283 51 65 chr2 112224932 112225183 -141031400 + L1ME LINE L1 20 273 -5797 2312 114 0 6 chr2 112225183 112225498 -141031085 - AluSq SINE Alu 0 313 1 968 283 51 65 chr2 112225498 112226063 -141030520 + L1ME LINE L1 273 825 -5245 361 275 134 43 chr2 112226066 112226557 -141030026 + L1ME LINE L1 926 1461 -4619 1166 242 6 53 chr2 112226573 112226929 -141029654 + L1M4 LINE L1 16 354 -6188 410 197 127 14 chr2 112226925 112227067 -141029516 + L1M4 LINE L1 764 921 -5621 * 2228 81 34 0 chr2 112227071 112227369 -141029214 + AluSg SINE Alu 1 308 -2 207 0 0 0 chr2 112227369 112227392 -141029191 + (TA)n Simple_repeat Simple_repeat 1 23 0 1599 184 38 50 chr2 112227492 112227590 -141028993 + L1M4 LINE L1 824 922 -5620 2231 83 33 0 chr2 112227590 112227890 -141028693 + AluSg SINE Alu 1 310 0 303 28 0 0 chr2 112227893 112227929 -141028654 + (TA)n Simple_repeat Simple_repeat 2 37 0 1599 184 38 50 chr2 112227929 112228304 -141028279 + L1M4 LINE L1 924 1295 -5247 913 231 29 33 chr2 112228409 112228716 -141027867 + L1M4 LINE L1 4317 4622 -2022 423 257 81 7 chr2 112228744 112228880 -141027703 - MER20 DNA MER1_type -73 146 1 565 246 85 55 chr2 112228891 112229257 -141027326 + L1M4 LINE L1 4656 5032 -1612 334 247 31 41 chr2 112229331 112229428 -141027155 + MIR SINE MIR 167 262 0 339 231 66 0 chr2 112231403 112231494 -141025089 - MIR SINE MIR -2 260 164 1749 158 6 31 chr2 112231496 112231813 -141024770 + AluJo SINE Alu 1 309 -3 514 266 44 76 chr2 112232380 112232722 -141023861 - Charlie7 DNA MER1_type -2071 541 211 244 321 25 0 chr2 112232923 112233004 -141023579 + L2 LINE L2 3190 3272 0 1592 173 14 21 chr2 112233042 112233326 -141023257 + AluJo SINE Alu 1 282 -30 308 156 44 0 chr2 112233422 112233512 -141023071 + (TA)n Simple_repeat Simple_repeat 1 94 0 28 0 0 0 chr2 112233603 112233631 -141022952 + AT_rich Low_complexity Low_complexity 1 28 0 241 260 0 156 chr2 112234048 112234144 -141022439 - L2 LINE L2 -17 3255 3175 375 219 94 0 chr2 112234222 112234318 -141022265 + LTR33 LTR ERVL 362 466 -55 286 301 12 0 chr2 112234335 112234418 -141022165 - L2 LINE L2 -342 2930 2847 1134 290 57 43 chr2 112234478 112235036 -141021547 - L2 LINE L2 -462 2852 2287 403 293 153 9 chr2 112235105 112235334 -141021249 - MLT1J1 LTR MaLR -172 274 13 30 0 0 0 chr2 112236257 112236287 -141020296 + AT_rich Low_complexity Low_complexity 1 30 0 2038 98 10 52 chr2 112236414 112236719 -141019864 - AluSx SINE Alu -20 292 1 225 0 0 0 chr2 112237125 112237150 -141019433 + (T)n Simple_repeat Simple_repeat 1 25 0 4709 177 50 29 chr2 112237151 112238368 -141018215 + MER109 Unknown Unknown 1 1415 -1017 1740 216 3 22 chr2 112238368 112238739 -141017844 - LTR10B LTR ERV1 0 547 184 2038 220 2 9 chr2 112238855 112239301 -141017282 - BaEV-int LTR ERV1 -10 6639 6197 737 199 0 7 chr2 112239651 112239787 -141016796 + MER2 DNA MER2_type 2 136 -209 22 35 0 0 chr2 112239787 112239816 -141016767 + AT_rich Low_complexity Low_complexity 1 29 0 1530 190 21 28 chr2 112239819 112240109 -141016474 - AluJo SINE Alu -24 288 1 1228 156 9 9 chr2 112240112 112240337 -141016246 + MER2 DNA MER2_type 121 345 0 2192 85 10 7 chr2 112241091 112241386 -141015197 - AluY SINE Alu -15 296 1 719 241 77 14 chr2 112241386 112241593 -141014990 - MIR SINE MIR -36 226 7 826 311 133 18 chr2 112242000 112242338 -141014245 + L2 LINE L2 549 925 -2389 482 273 343 8 chr2 112242342 112242709 -141013874 + L2 LINE L2 1450 1939 -1375 1994 149 7 3 chr2 112243385 112243693 -141012890 + AluSx SINE Alu 1 309 -3 237 28 56 0 chr2 112243853 112243889 -141012694 + (TTTA)n Simple_repeat Simple_repeat 2 180 0 2119 93 7 0 chr2 112243889 112244169 -141012414 - AluY SINE Alu -1 317 1 644 221 16 134 chr2 112244490 112244744 -141011839 + MIR SINE MIR 39 262 0 528 134 0 0 chr2 112244775 112244857 -141011726 - AluSp/q SINE Alu -16 297 216 2167 115 3 0 chr2 112245037 112245333 -141011250 + AluSx SINE Alu 1 297 -15 779 151 52 0 chr2 112245382 112245554 -141011029 - L1MA4A LINE L1 -2 6301 6121 4095 183 72 30 chr2 112245554 112245869 -141010714 - L1MA4A LINE L1 -399 5904 5604 2096 89 20 14 chr2 112245869 112246161 -141010422 - AluY SINE Alu -17 294 1 4095 183 72 30 chr2 112246161 112246566 -141010017 - L1MA4A LINE L1 -699 5604 5217 1562 186 7 4 chr2 112246566 112246845 -141009738 + AluJo SINE Alu 21 300 -12 4095 183 72 30 chr2 112246845 112247867 -141008716 - L1MA4A LINE L1 -1086 5217 4091 2250 103 0 0 chr2 112248255 112248546 -141008037 - AluSc SINE Alu -18 291 1 1815 167 10 3 chr2 112248549 112248843 -141007740 - AluJo SINE Alu -16 296 1 248 286 0 0 chr2 112248882 112248938 -141007645 - MER58 DNA MER1_type -29 2391 131 35 41 0 0 chr2 112248953 112249002 -141007581 + AT_rich Low_complexity Low_complexity 1 49 0 1057 185 213 131 chr2 112249055 112249482 -141007101 - LTR40a LTR ERVL 0 462 1 404 229 76 9 chr2 112249482 112249587 -141006996 - MIR SINE MIR -134 128 17 598 230 150 27 chr2 112249587 112249774 -141006809 + MER58C DNA MER1_type 1 210 -5 2110 134 0 6 chr2 112249894 112250242 -141006341 + AluSx SINE Alu 1 312 0 806 279 118 17 chr2 112250501 112250848 -141005735 + L2 LINE L2 2414 2795 -519 532 221 89 132 chr2 112250891 112251216 -141005367 + L2 LINE L2 2999 3309 -4 773 161 0 62 chr2 112251993 112252155 -141004428 - MER58B DNA MER1_type -11 330 179 1674 124 113 7 chr2 112252156 112252430 -141004153 - AluSg1 SINE Alu -6 303 1 23 78 0 0 chr2 112252432 112252483 -141004100 + AT_rich Low_complexity Low_complexity 1 51 0 202 194 41 41 chr2 112253100 112253198 -141003385 + (TTATA)n Simple_repeat Simple_repeat 5 102 0 * 222 200 40 0 chr2 112253125 112253200 -141003383 + (TA)n Simple_repeat Simple_repeat 2 79 0 278 226 38 0 chr2 112253746 112253799 -141002784 + MIR SINE MIR 56 110 -152 1293 181 122 11 chr2 112253840 112254111 -141002472 + AluJo SINE Alu 12 312 0 2296 102 0 37 chr2 112254617 112254942 -141001641 + AluSq SINE Alu 1 313 0 2222 115 3 0 chr2 112255965 112256261 -141000322 - AluSx SINE Alu -15 297 1 249 335 86 40 chr2 112256763 112256915 -140999668 + L2 LINE L2 3114 3272 0 234 364 51 25 chr2 112258198 112258316 -140998267 - L2 LINE L2 -30 3242 3122 789 293 0 0 chr2 112258637 112258842 -140997741 + MIR SINE MIR 38 242 -20 29 78 0 0 chr2 112259046 112259110 -140997473 + AT_rich Low_complexity Low_complexity 1 64 0 271 0 0 49 chr2 112259211 112259252 -140997331 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2063 84 7 31 chr2 112259254 112259541 -140997042 - AluY SINE Alu -31 280 1 1870 139 11 0 chr2 112260300 112260573 -140996010 - AluSx SINE Alu -15 297 22 517 288 95 51 chr2 112260689 112261005 -140995578 + MLT1I LTR MaLR 47 376 -33 1288 245 23 13 chr2 112261030 112261404 -140995179 + L1ME LINE L1 5288 5652 -469 2259 111 31 18 chr2 112261512 112261901 -140994682 + MER11C LTR ERVK 678 1071 0 757 182 16 36 chr2 112262151 112262343 -140994240 - MER53 DNA DNA -1 188 1 2162 116 3 0 chr2 112262844 112263137 -140993446 - AluSx SINE Alu -18 294 1 2491 80 0 6 chr2 112263191 112263504 -140993079 - AluY SINE Alu 0 311 1 209 301 75 21 chr2 112263868 112263961 -140992622 - MIR SINE MIR -142 120 23 369 227 53 73 chr2 112264583 112264733 -140991850 - MIR SINE MIR -81 181 35 256 310 89 78 chr2 112264858 112265206 -140991377 - L2 LINE L2 -52 3261 2910 24 32 0 0 chr2 112267892 112267923 -140988660 + AT_rich Low_complexity Low_complexity 1 31 0 1789 174 7 7 chr2 112268050 112268355 -140988228 + AluJo SINE Alu 1 305 -7 1610 150 35 52 chr2 112269175 112269491 -140987092 + AluJb SINE Alu 3 313 0 2016 148 3 0 chr2 112270440 112270738 -140985845 + AluSx SINE Alu 1 299 -13 2303 268 69 45 chr2 112270756 112271925 -140984658 - L1M3b LINE L1 -5201 1687 611 22 0 0 0 chr2 112272398 112272420 -140984163 + AT_rich Low_complexity Low_complexity 1 22 0 2887 132 69 13 chr2 112272809 112273350 -140983233 + LTR10C LTR ERV1 12 505 0 447 236 181 79 chr2 112273618 112273834 -140982749 - MIR SINE MIR -5 257 20 304 346 9 9 chr2 112274032 112274139 -140982444 + MIR3 SINE MIR 75 181 -27 247 289 74 0 chr2 112274913 112275034 -140981549 + L1ME LINE L1 5732 5861 -260 923 224 96 0 chr2 112276506 112276756 -140979827 - L1MB5 LINE L1 -9 6165 5892 * 1015 312 28 20 chr2 112276755 112277146 -140979437 - L1M3b LINE L1 -6462 397 4 197 242 0 76 chr2 112277208 112277274 -140979309 - L3 LINE CR1 -3 1574 1514 2132 160 95 0 chr2 112279291 112279679 -140976904 - MSTA LTR MaLR -3 425 1 7977 194 10 16 chr2 112279679 112281316 -140975267 - MSTA-int LTR MaLR 0 1651 25 649 185 73 7 chr2 112281365 112281523 -140975060 - MSTB LTR MaLR -244 184 1 867 264 59 6 chr2 112281642 112281945 -140974638 - MLT1H LTR MaLR -206 389 42 282 281 21 10 chr2 112282104 112282200 -140974383 + MLT1H LTR MaLR 128 224 -325 4519 141 11 40 chr2 112282217 112283074 -140973509 - L1MA2 LINE L1 0 6304 5473 1223 217 43 8 chr2 112283221 112283618 -140972965 - L1 LINE L1 -2739 3407 2997 234 314 160 0 chr2 112283835 112284010 -140972573 - L2 LINE L2 -63 3250 3048 253 184 13 13 chr2 112284642 112284718 -140971865 + GA-rich Low_complexity Low_complexity 3 78 0 28 0 0 0 chr2 112284897 112284925 -140971658 + AT_rich Low_complexity Low_complexity 1 28 0 1306 128 13 4 chr2 112287166 112287393 -140969190 + L1MA4A LINE L1 6065 6293 -10 305 325 127 0 chr2 112287645 112287771 -140968812 + MIR3 SINE MIR 42 183 -25 414 173 107 0 chr2 112288063 112288138 -140968445 + L1PA13 LINE L1 1 83 -6704 * 8033 163 23 30 chr2 112288132 112289192 -140967391 + L1P LINE L1 3644 4689 -1457 2201 106 7 3 chr2 112289192 112289493 -140967090 + AluY SINE Alu 1 302 -9 8033 163 23 30 chr2 112289493 112290192 -140966391 + L1P LINE L1 4689 5391 -755 1856 185 56 22 chr2 112290190 112290978 -140965605 + L1MCa LINE L1 1711 2479 -3947 * 1885 213 14 2 chr2 112290982 112291395 -140965188 + L1MC1 LINE L1 5911 6328 -5 324 248 126 32 chr2 112294169 112294402 -140962181 + MER115 DNA AcHobo 591 693 0 27 29 0 0 chr2 112294580 112294614 -140961969 + AT_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr2 112295487 112295509 -140961074 + AT_rich Low_complexity Low_complexity 1 22 0 420 292 157 11 chr2 112297278 112297456 -140959127 - MIR SINE MIR -11 251 48 2310 113 0 0 chr2 112298797 112299097 -140957486 - AluSx SINE Alu -12 300 1 380 216 164 17 chr2 112299097 112299213 -140957370 - MIR SINE MIR -71 191 59 1670 166 6 49 chr2 112300104 112300430 -140956153 + AluJb SINE Alu 1 312 0 23 54 0 0 chr2 112300485 112300522 -140956061 + AT_rich Low_complexity Low_complexity 1 37 0 339 245 0 0 chr2 112300844 112300938 -140955645 + (CA)n Simple_repeat Simple_repeat 1 94 0 344 337 111 17 chr2 112300962 112301134 -140955449 - MIR SINE MIR -73 189 2 183 156 0 0 chr2 112303968 112304000 -140952583 + GA-rich Low_complexity Low_complexity 3 34 0 1284 27 0 0 chr2 112304126 112304276 -140952307 + AluY SINE Alu 162 311 0 946 196 18 96 chr2 112304715 112304996 -140951587 + MLT1D-int LTR MaLR 393 651 -720 1425 273 22 99 chr2 112305045 112305839 -140950744 + MLT1D-int LTR MaLR 653 1730 -5 1794 210 126 9 chr2 112305846 112306298 -140950285 + MLT1D LTR MaLR 1 505 0 920 266 50 48 chr2 112306342 112306718 -140949865 - MLT2C1 LTR ERVL -20 377 1 703 260 121 42 chr2 112306720 112307217 -140949366 + L1MC4 LINE L1 7365 7900 -142 237 33 0 0 chr2 112307241 112307271 -140949312 + (TG)n Simple_repeat Simple_repeat 1 30 0 367 175 0 0 chr2 112308432 112308495 -140948088 - MLT1E3 LTR MaLR 0 624 562 21 57 0 0 chr2 112309266 112309301 -140947282 + AT_rich Low_complexity Low_complexity 1 35 0 258 32 0 0 chr2 112312253 112312284 -140944299 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 1870 131 0 31 chr2 112312287 112312577 -140944006 - AluSx SINE Alu -31 281 1 21 36 0 0 chr2 112312640 112312668 -140943915 + AT_rich Low_complexity Low_complexity 1 28 0 267 227 27 27 chr2 112313368 112313443 -140943140 + MIR3 SINE MIR 109 183 -25 241 400 30 17 chr2 112314214 112314449 -140942134 - L2 LINE L2 -2666 648 411 312 284 44 54 chr2 112314786 112315083 -140941500 - MER41E LTR ERV1 -59 453 187 283 267 0 23 chr2 112315533 112315619 -140940964 + MER69 DNA AcHobo 2442 2525 -1 232 345 72 70 chr2 112315644 112316192 -140940391 + L2 LINE L2 2500 3059 -213 235 320 137 33 chr2 112316279 112316432 -140940151 + L2 LINE L2 3104 3272 0 768 188 10 0 chr2 112316870 112317062 -140939521 + Charlie5 DNA MER1_type 2431 2624 0 3636 32 9 0 chr2 112317631 112318065 -140938518 - L1PA3 LINE L1 0 6155 5718 215 255 0 0 chr2 112318687 112318738 -140937845 + A-rich Low_complexity Low_complexity 1 51 0 200 221 0 15 chr2 112318754 112318822 -140937761 + GA-rich Low_complexity Low_complexity 1 67 0 30 45 0 0 chr2 112320028 112320072 -140936511 + AT_rich Low_complexity Low_complexity 1 44 0 250 275 60 36 chr2 112320153 112320320 -140936263 + L1ME4a LINE L1 5938 6108 -13 402 368 62 34 chr2 112321092 112321383 -140935200 + LTR33 LTR ERVL 3 301 -220 213 208 47 19 chr2 112321499 112321605 -140934978 + (TA)n Simple_repeat Simple_repeat 2 110 0 215 238 0 0 chr2 112321652 112321694 -140934889 + (TATATG)n Simple_repeat Simple_repeat 3 44 0 1875 348 59 17 chr2 112321728 112322943 -140933640 + ERVL LTR ERVL 1121 2386 -3378 2193 130 7 0 chr2 112322969 112323277 -140933306 + AluSp SINE Alu 1 310 -3 399 274 55 40 chr2 112323332 112323533 -140933050 + ERVL LTR ERVL 2485 2688 -2966 292 374 32 36 chr2 112323779 112324131 -140932452 - L2 LINE L2 -292 2980 2630 775 301 75 13 chr2 112324205 112324590 -140931993 - Charlie7 DNA MER1_type -1923 689 281 324 267 56 0 chr2 112324684 112324774 -140931809 - Charlie7 DNA MER1_type -2511 101 7 686 288 68 34 chr2 112325902 112326276 -140930307 + MIR SINE MIR 1 256 -6 186 118 0 0 chr2 112326277 112326311 -140930272 + (ATG)n Simple_repeat Simple_repeat 2 35 0 676 268 11 21 chr2 112327307 112327497 -140929086 - MER5A DNA MER1_type -1 188 1 261 371 106 0 chr2 112327522 112327654 -140928929 + MIR3 SINE MIR 32 177 -31 480 374 48 4 chr2 112327985 112328212 -140928371 - MIR SINE MIR -11 251 15 344 97 48 32 chr2 112328239 112328363 -140928220 + (TA)n Simple_repeat Simple_repeat 1 126 0 2222 111 0 10 chr2 112328873 112329171 -140927412 - AluSg SINE Alu -15 295 1 393 271 96 57 chr2 112329468 112329984 -140926599 + MER34C LTR ERV1 5 539 -3 606 298 43 11 chr2 112330318 112330506 -140926077 - MIR SINE MIR -46 216 23 416 240 311 7 chr2 112330530 112330826 -140925757 + L2 LINE L2 2414 2799 -515 694 328 37 4 chr2 112331208 112331452 -140925131 + MIR SINE MIR 11 262 0 1515 210 39 17 chr2 112332003 112332360 -140924223 - MLT1A1 LTR MaLR 0 365 1 1622 150 21 38 chr2 112332399 112332706 -140923877 - AluSx SINE Alu 0 302 1 193 113 210 48 chr2 112333779 112333841 -140922742 - MIR SINE MIR -108 154 83 1929 157 0 3 chr2 112334394 112334688 -140921895 + AluJb SINE Alu 1 293 -19 482 298 109 18 chr2 112334711 112335107 -140921476 + L1MEc LINE L1 1366 1797 -4599 326 282 60 26 chr2 112335335 112335452 -140921131 + L1MEc LINE L1 2135 2255 -4141 1270 272 100 17 chr2 112335495 112336373 -140920210 + L1MEc LINE L1 2530 3480 -2735 3802 88 6 0 chr2 112336420 112336917 -140919666 + LTR3b LTR ERVK 1 500 0 236 276 26 0 chr2 112336922 112336998 -140919585 - L1M4 LINE L1 -1329 4817 4740 455 316 178 8 chr2 112337011 112337436 -140919147 + L1MEc LINE L1 3509 3860 -2355 5568 142 8 2 chr2 112337436 112338695 -140917888 - L1PA16 LINE L1 0 6166 4916 455 316 178 8 chr2 112338695 112339050 -140917533 + L1MEc LINE L1 3860 4422 -1793 1026 294 113 26 chr2 112339271 112339869 -140916714 + L1M2 LINE L1 4819 5466 -813 2218 99 0 0 chr2 112339869 112340180 -140916403 + AluSg SINE Alu 1 311 0 1026 294 113 26 chr2 112340180 112340250 -140916333 + L1M2 LINE L1 5466 5528 -751 309 257 3 0 chr2 112340251 112340335 -140916248 + L1ME3A LINE L1 5522 5607 -563 1313 232 77 35 chr2 112340338 112340769 -140915814 + L1ME3A LINE L1 5721 6169 -1 630 249 51 11 chr2 112342187 112342364 -140914219 - MER58C DNA MER1_type 0 215 32 1222 156 94 27 chr2 112342855 112343111 -140913472 + AluJb SINE Alu 3 275 -37 342 0 0 0 chr2 112343116 112343154 -140913429 + (TAA)n Simple_repeat Simple_repeat 1 38 0 605 312 65 0 chr2 112343391 112343622 -140912961 + MIR SINE MIR 2 247 -15 235 276 94 16 chr2 112343669 112343796 -140912787 - L1ME LINE L1 -303 5818 5682 11393 35 2 1 chr2 112343820 112345670 -140910913 + L1PA4 LINE L1 3989 5841 -314 35 0 0 0 chr2 112345670 112345705 -140910878 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 112346014 112346035 -140910548 + AT_rich Low_complexity Low_complexity 1 21 0 29 78 0 0 chr2 112346360 112346424 -140910159 + AT_rich Low_complexity Low_complexity 1 64 0 1730 191 0 7 chr2 112346467 112346765 -140909818 + AluJb SINE Alu 1 296 -16 2089 190 16 2 chr2 112346908 112347335 -140909248 + MER65C LTR ERV1 29 461 0 488 126 58 0 chr2 112347338 112347441 -140909142 + L1MB7 LINE L1 5766 5874 -310 719 149 14 7 chr2 112347443 112347584 -140908999 + L1MB7 LINE L1 6000 6141 -43 456 217 28 9 chr2 112347692 112347798 -140908785 + LTR25 LTR ERV1 249 356 -438 281 217 0 58 chr2 112347801 112347870 -140908713 + MER61E LTR ERV1 99 163 -406 2775 7 0 0 chr2 112347987 112348286 -140908297 + AluYa5 SINE Alu 1 299 -12 803 178 18 6 chr2 112348286 112348449 -140908134 + MER61E LTR ERV1 354 518 -51 778 254 37 27 chr2 112348642 112349114 -140907469 + L1M4c LINE L1 2056 2539 -3843 347 228 46 78 chr2 112349556 112349775 -140906808 + L1PBb LINE L1 1422 1633 -5217 204 125 0 0 chr2 112349776 112349808 -140906775 + (GGAGAA)n Simple_repeat Simple_repeat 6 37 0 588 247 17 82 chr2 112349813 112350169 -140906414 + L1PBb LINE L1 1720 2052 -4797 40957 49 5 0 chr2 112350174 112356298 -140900285 - L1PA3 LINE L1 -3 6152 1 10929 200 23 49 chr2 112356307 112356501 -140900082 - L1M2 LINE L1 -472 5819 5621 2009 187 45 27 chr2 112356501 112356950 -140899633 + LOR1b LTR ERV1 1 457 -4 10929 200 23 49 chr2 112356950 112359531 -140897052 - L1M2 LINE L1 -670 5621 3056 302 306 111 0 chr2 112359531 112359639 -140896944 - FLAM_A SINE Alu -12 121 2 10929 200 23 49 chr2 112359639 112360388 -140896195 - L1M2 LINE L1 -3235 3056 2288 359 177 25 0 chr2 112360396 112360475 -140896108 - L1PA16 LINE L1 -3 6163 6083 * 3217 58 2 32 chr2 112360472 112360935 -140895648 - L1P LINE L1 -4884 1262 814 1012 195 23 0 chr2 112360936 112361151 -140895432 + L1PBb LINE L1 2549 2768 -4081 1192 27 0 0 chr2 112361186 112361334 -140895249 + L1PA3 LINE L1 4450 4597 -1549 3406 29 0 0 chr2 112361447 112361896 -140894687 + L1PA3 LINE L1 5718 6166 0 678 262 123 3 chr2 112361896 112362205 -140894378 + L1 LINE L1 3290 3635 -2511 1103 160 46 13 chr2 112362206 112362444 -140894139 + L1MB4 LINE L1 5923 6168 -12 270 0 0 0 chr2 112362496 112362526 -140894057 + (CA)n Simple_repeat Simple_repeat 2 31 0 2195 197 108 55 chr2 112362770 112363481 -140893102 + LTR41 LTR ERVL 5 753 -20 1709 301 105 6 chr2 112364044 112364961 -140891622 + L2 LINE L2 2153 3161 -152 1969 183 78 2 chr2 112365196 112365594 -140890989 + MSTB1 LTR MaLR 1 428 -4 459 0 0 0 chr2 112365961 112366012 -140890571 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 223 333 0 13 chr2 112366018 112366096 -140890487 + L2 LINE L2 3236 3312 -1 386 187 0 55 chr2 112367028 112367119 -140889464 + LTR38B LTR ERV1 4 89 -521 390 164 15 0 chr2 112367122 112367189 -140889394 - MLT1D LTR MaLR -437 68 1 347 280 21 63 chr2 112367451 112367643 -140888940 + MIR SINE MIR 19 204 -58 566 219 18 61 chr2 112369048 112369212 -140887371 - MER105 DNA DNA -1 203 47 664 253 16 47 chr2 112369218 112369408 -140887175 + MER5A DNA MER1_type 6 189 0 263 311 50 25 chr2 112369992 112370230 -140886353 - HAL1b LINE L1 -432 916 673 2884 133 16 22 chr2 112370756 112371252 -140885331 - MER61-int LTR ERV1 -802 4415 3923 2183 246 75 52 chr2 112371296 112372233 -140884350 + MER31-int LTR ERV1 3337 4294 -642 984 209 83 56 chr2 112372238 112372481 -140884102 - MLT1C LTR MaLR 0 467 209 309 51 0 0 chr2 112372481 112372520 -140884063 + (TG)n Simple_repeat Simple_repeat 2 40 0 984 209 83 56 chr2 112372520 112372648 -140883935 - MLT1C LTR MaLR -258 209 86 461 243 103 82 chr2 112372648 112372940 -140883643 + MLT1B LTR MaLR 3 300 -90 318 196 43 22 chr2 112373365 112373457 -140883126 + MLT1B LTR MaLR 274 367 -7 309 270 34 0 chr2 112373454 112373543 -140883040 - MLT1C LTR MaLR -375 92 1 * 325 241 11 0 chr2 112373725 112373812 -140882771 + MER31-int LTR ERV1 4375 4462 -474 210 315 0 0 chr2 112374931 112374985 -140881598 - MIR SINE MIR -152 110 57 585 76 0 0 chr2 112375042 112375121 -140881462 + (GGAA)n Simple_repeat Simple_repeat 4 82 0 255 61 0 0 chr2 112375121 112375154 -140881429 + (CAGG)n Simple_repeat Simple_repeat 1 33 0 666 215 143 25 chr2 112375300 112375537 -140881046 - LTR50 LTR ERVL 0 795 531 427 258 96 12 chr2 112375708 112375875 -140880708 - LTR50 LTR ERVL -613 182 2 457 261 133 64 chr2 112375913 112376366 -140880217 - MLT1H LTR MaLR -25 524 41 494 276 111 37 chr2 112376453 112376750 -140879833 + MER92B LTR ERV1 318 636 0 828 306 94 46 chr2 112377037 112378217 -140878366 - HERVL LTR ERVL -2475 3179 1922 938 269 5 0 chr2 112378217 112378440 -140878143 - MER58A DNA MER1_type 0 224 1 828 306 94 46 chr2 112378440 112378514 -140878069 - HERVL LTR ERVL -3732 1922 1853 856 237 16 23 chr2 112378614 112378922 -140877661 + L1MB2 LINE L1 3673 3978 -2168 225 286 0 0 chr2 112378931 112379008 -140877575 + L1M4c LINE L1 1394 1470 -4914 24 0 0 0 chr2 112379026 112379050 -140877533 + AT_rich Low_complexity Low_complexity 1 24 0 956 174 42 42 chr2 112379050 112379309 -140877274 - L1MA8 LINE L1 -1 6290 6032 * 1325 229 24 8 chr2 112379305 112379676 -140876907 + L1M4c LINE L1 1454 1830 -4554 2579 134 5 0 chr2 112379764 112380159 -140876424 + THE1B-int LTR MaLR 1178 1574 -6 1785 197 28 3 chr2 112380164 112380519 -140876064 + THE1B LTR MaLR 1 364 0 1759 154 48 38 chr2 112380519 112380914 -140875669 + L1MA9 LINE L1 5907 6305 -7 1636 227 94 21 chr2 112380921 112381790 -140874793 + L1MB2 LINE L1 5001 6011 -160 670 243 19 24 chr2 112381850 112382060 -140874523 + L1MB5 LINE L1 5609 5817 -357 706 235 108 34 chr2 112382070 112382338 -140874245 + L1MB5 LINE L1 5885 6172 -2 38 61 0 0 chr2 112382338 112382404 -140874179 + AT_rich Low_complexity Low_complexity 1 66 0 249 277 67 28 chr2 112383239 112383492 -140873091 + L1M4c LINE L1 3426 3688 -2694 450 253 13 40 chr2 112383570 112383720 -140872863 + LTR4 LTR ERV1 14 159 -437 792 228 20 68 chr2 112383944 112384238 -140872345 + LTR4 LTR ERV1 317 596 0 390 295 66 12 chr2 112384313 112384479 -140872104 - L1ME LINE L1 -739 5431 5257 22 0 0 0 chr2 112384557 112384579 -140872004 + AT_rich Low_complexity Low_complexity 1 22 0 1975 156 0 0 chr2 112384879 112385167 -140871416 + AluSg SINE Alu 1 288 -22 387 0 0 0 chr2 112386460 112386503 -140870080 + (CA)n Simple_repeat Simple_repeat 2 44 0 7429 112 18 10 chr2 112387418 112388601 -140867982 - HUERS-P3b LTR ERV1 -638 6780 5589 544 54 0 0 chr2 112388601 112388675 -140867908 - HUERS-P3b LTR ERV1 -1969 5449 5376 2232 108 0 0 chr2 112388680 112388976 -140867607 + AluY SINE Alu 5 300 -11 2932 125 25 6 chr2 112388980 112389491 -140867092 - HUERS-P3b LTR ERV1 -2962 4456 3936 * 4395 103 49 14 chr2 112389487 112390185 -140866398 - HUERS-P3b LTR ERV1 -3624 3794 3073 1962 199 29 34 chr2 112390185 112390380 -140866203 + LTR8 LTR ERV1 1 195 -496 2444 74 0 0 chr2 112390380 112390676 -140865907 + AluY SINE Alu 1 296 -15 1962 199 29 34 chr2 112390676 112390923 -140865660 + LTR8 LTR ERV1 195 441 -250 10779 117 15 9 chr2 112390923 112392596 -140863987 - HUERS-P3b LTR ERV1 -4776 2642 960 4778 120 22 1 chr2 112392618 112393343 -140863240 - THE1B-int LTR MaLR -839 741 2 920 136 114 38 chr2 112393344 112393528 -140863055 - THE1B LTR MaLR 0 364 167 408 371 25 5 chr2 112393881 112394078 -140862505 + MIR SINE MIR 7 207 -55 263 280 21 43 chr2 112394491 112394584 -140861999 - MER20B DNA MER1_type -606 177 87 481 193 21 169 chr2 112394903 112395300 -140861283 + L1MC4 LINE L1 6669 7042 -1000 285 367 12 27 chr2 112395476 112395732 -140860851 + L1ME1 LINE L1 271 522 -5874 994 196 79 176 chr2 112395828 112396282 -140860301 + MLT1E3 LTR MaLR 72 601 -23 507 271 93 50 chr2 112396294 112396914 -140859669 + L1ME1 LINE L1 1590 4864 -1351 2098 257 78 33 chr2 112396921 112398074 -140858509 + L1ME1 LINE L1 5026 6230 -5 530 263 87 39 chr2 112398229 112398610 -140857973 + L1MC4a LINE L1 7020 7418 -390 327 261 96 0 chr2 112398596 112398711 -140857872 + L1MC5 LINE L1 7316 7441 -520 * 842 107 18 6 chr2 112399074 112399243 -140857340 + (TAGA)n Simple_repeat Simple_repeat 3 173 0 219 273 98 98 chr2 112401325 112401662 -140854921 + L2 LINE L2 2934 3270 -2 326 131 33 0 chr2 112401716 112401777 -140854806 + (TATG)n Simple_repeat Simple_repeat 2 64 0 310 283 0 22 chr2 112401779 112401871 -140854712 + L1MC4 LINE L1 6614 6703 -1339 276 346 65 5 chr2 112403417 112403631 -140852952 + L3 LINE CR1 1225 1451 -126 1394 209 33 36 chr2 112404060 112404391 -140852192 + MLT2C1 LTR ERVL 13 342 -55 335 243 59 0 chr2 112404391 112404527 -140852056 + (TA)n Simple_repeat Simple_repeat 2 145 0 1244 194 35 62 chr2 112404535 112404875 -140851708 + MER44D DNA MER2_type 9 609 0 598 221 38 6 chr2 112406334 112406492 -140850091 - MER5A DNA MER1_type 0 189 27 4612 110 11 5 chr2 112409803 112410459 -140846124 - PABL_A LTR ERV1 0 660 1 1545 112 0 2 chr2 112410459 112410752 -140845831 - PABL_A-int LTR ERV1 0 5015 4659 182 276 132 26 chr2 112410965 112411041 -140845542 + MIR SINE MIR 126 209 -53 300 234 64 50 chr2 112411605 112411746 -140844837 + L2 LINE L2 3164 3306 -7 26 50 0 0 chr2 112413761 112413801 -140842782 + AT_rich Low_complexity Low_complexity 1 40 0 218 344 23 31 chr2 112414153 112414281 -140842302 - MIR3 SINE MIR 0 208 82 1426 208 113 3 chr2 112414970 112415306 -140841277 + MER93b LTR ERV1 1 373 0 544 210 153 40 chr2 112415500 112415676 -140840907 + MER58C DNA MER1_type 19 214 -1 520 253 35 12 chr2 112418140 112418310 -140838273 - LTR16A1 LTR ERVL -9 448 275 191 35 0 35 chr2 112419059 112419088 -140837495 + (CGAAA)n Simple_repeat Simple_repeat 2 29 0 2229 105 0 20 chr2 112419949 112420254 -140836329 + AluSx SINE Alu 1 299 -13 192 152 0 0 chr2 112420276 112420309 -140836274 + GA-rich Low_complexity Low_complexity 2 34 0 2468 173 61 4 chr2 112420690 112421165 -140835418 - ERVL LTR ERVL -183 5581 5080 * 10502 168 19 7 chr2 112421157 112422287 -140834296 - ERVL LTR ERVL -2167 3597 2482 5971 34 17 0 chr2 112422287 112422990 -140833593 + L1PA4 LINE L1 5438 6152 -3 243 0 0 0 chr2 112422995 112423022 -140833561 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 10502 168 19 7 chr2 112423022 112423616 -140832967 - ERVL LTR ERVL -3285 2479 1846 793 172 33 28 chr2 112423616 112423860 -140832723 + L1MB7 LINE L1 5107 5352 -812 24 32 0 0 chr2 112425446 112425477 -140831106 + AT_rich Low_complexity Low_complexity 1 31 0 3992 173 40 42 chr2 112425631 112426489 -140830094 + L1MB7 LINE L1 5321 6176 -8 862 258 26 0 chr2 112426655 112426849 -140829734 + MER58A DNA MER1_type 24 222 -2 362 74 19 0 chr2 112427262 112427316 -140829267 + (TGAA)n Simple_repeat Simple_repeat 4 58 0 1649 78 26 13 chr2 112428133 112428363 -140828220 - L1PA7 LINE L1 -2 6152 5920 446 284 123 15 chr2 112428847 112429051 -140827532 + MIR SINE MIR 12 237 -25 2024 138 0 7 chr2 112429894 112430184 -140826399 + AluSx SINE Alu 1 288 -24 678 214 63 3 chr2 112430192 112430441 -140826142 - L1P5 LINE L1 -691 5460 5203 1883 137 7 3 chr2 112430441 112430725 -140825858 + THE1B LTR MaLR 80 364 0 3401 43 5 7 chr2 112431407 112431852 -140824731 - L1PA4 LINE L1 0 6155 5740 1747 153 255 3 chr2 112431888 112432261 -140824322 + MLT1C LTR MaLR 1 467 0 434 183 389 0 chr2 112433168 112433294 -140823289 - MER96 DNA MER1_type? 0 175 1 355 291 69 35 chr2 112433444 112433647 -140822936 + L1MD1 LINE L1 5860 6069 -173 * 1270 155 74 37 chr2 112433483 112433754 -140822829 + L1MB8 LINE L1 5898 6178 0 352 164 3 8 chr2 112433867 112433933 -140822650 - FLAM_A SINE Alu -10 123 69 814 159 0 8 chr2 112434101 112434233 -140822350 + FRAM SINE Alu 30 160 -16 2393 92 0 16 chr2 112434695 112435011 -140821572 + AluSq SINE Alu 1 311 -2 1096 161 21 81 chr2 112437252 112437488 -140819095 - MLT1B LTR MaLR -163 227 6 977 206 38 62 chr2 112437499 112437865 -140818718 - MSTB2 LTR MaLR -1 456 1 2175 214 112 25 chr2 112437948 112438513 -140818070 - MLT1E2 LTR MaLR -12 614 1 264 287 98 12 chr2 112438699 112438863 -140817720 + MIR SINE MIR 84 261 -1 197 292 42 0 chr2 112439212 112439284 -140817299 + MIR SINE MIR 186 260 -2 441 0 0 0 chr2 112439424 112439473 -140817110 + (CA)n Simple_repeat Simple_repeat 2 50 0 3829 150 74 76 chr2 112439477 112439927 -140816656 + L1MB3 LINE L1 5318 5767 -416 2288 122 0 0 chr2 112439927 112440239 -140816344 + AluSq SINE Alu 1 312 -1 3829 150 74 76 chr2 112440239 112440654 -140815929 + L1MB3 LINE L1 5767 6181 -2 230 168 64 16 chr2 112441395 112441520 -140815063 + CT-rich Low_complexity Low_complexity 1 131 0 258 32 0 0 chr2 112441797 112441828 -140814755 + (CA)n Simple_repeat Simple_repeat 1 31 0 556 277 78 6 chr2 112442569 112442735 -140813848 + MIR SINE MIR 52 229 -33 1607 205 14 0 chr2 112442827 112443120 -140813463 - AluJo SINE Alu -15 297 1 2141 120 0 3 chr2 112443490 112443781 -140812802 - AluSg SINE Alu -20 290 1 206 222 0 0 chr2 112444080 112444116 -140812467 + (TG)n Simple_repeat Simple_repeat 1 36 0 484 242 92 52 chr2 112445263 112445414 -140811169 - L1MEd LINE L1 -5115 1004 860 2005 138 0 27 chr2 112445414 112445712 -140810871 - AluJb SINE Alu -22 290 1 484 242 92 52 chr2 112445712 112445866 -140810717 - L1MEd LINE L1 -5259 860 687 842 306 59 44 chr2 112445932 112446458 -140810125 - L1MEd LINE L1 -5582 537 4 1291 155 22 26 chr2 112446717 112446943 -140809640 + L1MB3 LINE L1 5607 5831 -352 237 292 54 54 chr2 112446988 112447118 -140809465 + L2 LINE L2 3137 3266 -6 2240 93 0 3 chr2 112447127 112447417 -140809166 + AluSc SINE Alu 1 289 -20 211 313 62 0 chr2 112447605 112447701 -140808882 + MIR3 SINE MIR 101 202 -6 2305 39 43 7 chr2 112448340 112448620 -140807963 + AluY SINE Alu 1 290 -21 215 290 16 0 chr2 112448742 112448804 -140807779 + L2 LINE L2 3247 3309 -4 1785 270 147 38 chr2 112449009 112449915 -140806668 + L1MEd LINE L1 4 1008 -5111 1470 229 16 4 chr2 112450245 112450703 -140805880 - MER74A LTR ERVL -25 533 1 882 172 28 88 chr2 112450703 112450916 -140805667 - MER20 DNA MER1_type -18 201 2 1530 193 14 24 chr2 112453354 112453649 -140802934 + AluJo SINE Alu 1 292 -20 2194 98 7 0 chr2 112453656 112453955 -140802628 + AluSc SINE Alu 1 301 0 22 0 0 0 chr2 112453960 112453982 -140802601 + AT_rich Low_complexity Low_complexity 1 22 0 458 314 26 37 chr2 112454393 112454664 -140801919 - L1MC4a LINE L1 -1930 5878 5611 1697 229 18 5 chr2 112454740 112455124 -140801459 - L1ME2 LINE L1 0 6164 5776 199 296 0 0 chr2 112456406 112456450 -140800133 + L2 LINE L2 3244 3287 -26 237 279 0 16 chr2 112456545 112456606 -140799977 + MER97a DNA MER1_type? 2 61 -833 306 118 39 0 chr2 112456656 112456707 -140799876 - FLAM SINE Alu -5 128 76 2823 184 37 123 chr2 112456709 112457676 -140798907 + MER97b DNA MER1_type? 116 999 -54 1997 139 57 28 chr2 112457682 112458034 -140798549 + THE1B LTR MaLR 1 362 -2 11832 101 1 1 chr2 112458036 112459615 -140796968 + THE1B-int LTR MaLR 1 1580 0 1331 181 16 8 chr2 112459615 112459869 -140796714 + THE1B LTR MaLR 1 256 -99 411 153 0 0 chr2 112459869 112459928 -140796655 - AluJ/FLAM SINE Alu -251 61 3 783 129 9 0 chr2 112459969 112460085 -140796498 + THE1B LTR MaLR 248 364 0 338 42 21 0 chr2 112460165 112460213 -140796370 + (TTGG)n Simple_repeat Simple_repeat 3 51 0 2277 181 51 19 chr2 112460215 112460685 -140795898 - MER31A LTR ERV1 0 485 1 339 274 162 0 chr2 112461170 112461287 -140795296 - L2 LINE L2 0 3272 3137 1674 197 0 17 chr2 112461928 112462218 -140794365 - AluJo SINE Alu -27 285 1 4974 78 14 12 chr2 112462603 112463269 -140793314 + PABL_B LTR ERV1 1 667 0 5010 188 45 2 chr2 112463579 112464555 -140792028 + L1PBa LINE L1 627 1644 -5219 556 174 11 0 chr2 112464522 112464614 -140791969 + L1PBb LINE L1 8 100 -6104 * 1721 172 10 10 chr2 112465015 112465312 -140791271 - AluJo SINE Alu -5 307 11 351 304 106 24 chr2 112466046 112466253 -140790330 + LTR16B LTR ERVL 211 434 -30 287 249 132 37 chr2 112466629 112466818 -140789765 - LTR50 LTR ERVL -585 210 4 293 143 36 0 chr2 112466820 112466876 -140789707 + MER116 DNA Mariner 23 80 0 26 82 0 0 chr2 112466892 112466953 -140789630 + AT_rich Low_complexity Low_complexity 1 61 0 2438 91 3 0 chr2 112466957 112467266 -140789317 + AluSq SINE Alu 1 310 -3 183 189 0 27 chr2 112467889 112467926 -140788657 - L3 LINE CR1 -10 1567 1532 2315 207 13 50 chr2 112467995 112468599 -140787984 + L1ME3 LINE L1 5581 6162 0 204 323 72 40 chr2 112469747 112469970 -140786613 - L2 LINE L2 -1 3312 3083 1584 190 24 75 chr2 112470035 112470446 -140786137 - MLT1B LTR MaLR 0 390 1 234 315 101 13 chr2 112470473 112470622 -140785961 - L2 LINE L2 -784 2530 2369 408 271 145 65 chr2 112470645 112471073 -140785510 - L2 LINE L2 -641 2673 2212 473 262 6 64 chr2 112471077 112471249 -140785334 - LTR16A1 LTR ERVL -2 455 294 416 269 0 35 chr2 112471310 112471451 -140785132 - LTR16A1 LTR ERVL -319 138 3 181 336 72 8 chr2 112471452 112471577 -140785006 - L2 LINE L2 -1096 2218 2086 284 336 31 8 chr2 112472125 112472253 -140784330 + MER94 DNA DNA 4 134 0 957 233 60 26 chr2 112472364 112472729 -140783854 - LTR16A LTR ERVL -15 435 16 33 0 0 0 chr2 112474207 112474240 -140782343 + AT_rich Low_complexity Low_complexity 1 33 0 3377 44 2 5 chr2 112475214 112475627 -140780956 - L1PA7 LINE L1 0 6154 5743 736 253 104 0 chr2 112475635 112475837 -140780746 - MIR SINE MIR -39 223 1 23 33 0 0 chr2 112476394 112476424 -140780159 + AT_rich Low_complexity Low_complexity 1 30 0 200 354 16 8 chr2 112476820 112476947 -140779636 - MIR SINE MIR -131 131 4 423 349 106 41 chr2 112478092 112478696 -140777887 - L2 LINE L2 -564 2750 2108 294 378 45 12 chr2 112478905 112479151 -140777432 - L2 LINE L2 -413 2901 2648 597 272 38 5 chr2 112479652 112479836 -140776747 - MIR SINE MIR -36 226 37 319 234 0 0 chr2 112480167 112480231 -140776352 + L1MC5 LINE L1 7838 7901 -60 387 0 0 0 chr2 112480349 112480392 -140776191 + (CA)n Simple_repeat Simple_repeat 2 44 0 30 27 0 0 chr2 112480787 112480824 -140775759 + AT_rich Low_complexity Low_complexity 1 37 0 252 0 0 0 chr2 112481151 112481179 -140775404 + (CA)n Simple_repeat Simple_repeat 2 29 0 261 368 11 0 chr2 112481384 112481479 -140775104 + MER81 DNA DNA 19 114 0 2321 251 125 59 chr2 112481817 112483352 -140773231 + L2 LINE L2 1674 3300 -13 13975 31 0 3 chr2 112483361 112485764 -140770819 + L1PA4 LINE L1 3755 6154 -1 196 322 0 17 chr2 112486719 112486778 -140769805 + MER5B DNA MER1_type 89 146 -32 5998 105 17 1 chr2 112486781 112487646 -140768937 - L1PA10 LINE L1 -10 6473 5595 20952 176 11 41 chr2 112487668 112492716 -140763867 - L1PA10 LINE L1 -1346 5115 2 4828 130 12 3 chr2 112494201 112494964 -140761619 - L1MA6 LINE L1 0 6300 5531 417 146 33 44 chr2 112495070 112495161 -140761422 - L1MA6 LINE L1 -757 5534 5445 217 281 73 61 chr2 112495238 112495402 -140761181 + MIR3 SINE MIR 37 202 -6 716 178 67 28 chr2 112495534 112495714 -140760869 + L1MA9 LINE L1 6083 6269 -43 218 268 49 37 chr2 112496323 112496405 -140760178 + L2 LINE L2 3138 3220 -52 276 102 0 0 chr2 112496426 112496475 -140760108 + (TGGA)n Simple_repeat Simple_repeat 2 50 0 225 194 151 43 chr2 112497298 112497391 -140759192 + MIR SINE MIR 157 259 -3 1550 130 53 32 chr2 112497420 112497530 -140759053 - AluSx SINE Alu -60 252 146 2439 92 0 0 chr2 112497530 112497833 -140758750 - AluSx SINE Alu -9 303 1 1550 130 53 32 chr2 112497833 112497968 -140758615 - AluSx SINE Alu -166 146 2 297 189 90 99 chr2 112498209 112498320 -140758263 - MLT1J LTR MaLR -13 498 389 2759 106 19 0 chr2 112499755 112500123 -140756460 + THE1C LTR MaLR 1 375 0 220 235 0 25 chr2 112501036 112501117 -140755466 + (TAA)n Simple_repeat Simple_repeat 3 81 0 198 250 132 13 chr2 112501151 112501227 -140755356 - L2 LINE L2 -51 3221 3137 468 254 151 0 chr2 112501760 112501886 -140754697 + Charlie8 DNA MER1_type 1 145 -2272 2382 70 0 3 chr2 112502418 112502716 -140753867 - AluSc SINE Alu -12 297 1 769 219 26 0 chr2 112502732 112502924 -140753659 - L1M4 LINE L1 -1722 4424 4228 699 185 8 0 chr2 112502924 112503043 -140753540 - Tigger3(Golem) DNA MER2_type -1 3028 2909 500 145 40 0 chr2 112503049 112503125 -140753458 - Tigger3(Golem) DNA MER2_type -2948 81 3 1191 226 54 7 chr2 112503126 112503423 -140753160 - L1M4 LINE L1 -1916 4230 3920 1734 216 100 32 chr2 112503436 112503904 -140752679 - MLT1D LTR MaLR 0 505 6 5467 223 68 7 chr2 112503911 112505358 -140751225 - L1M4 LINE L1 -2168 3978 2439 2522 62 0 0 chr2 112505358 112505663 -140750920 - AluY SINE Alu -6 305 1 5467 223 68 7 chr2 112505663 112505676 -140750907 - L1M4 LINE L1 -3707 2439 2428 9232 200 6 22 chr2 112505714 112506738 -140749845 + L1 LINE L1 2276 3255 -2891 2186 132 7 0 chr2 112506738 112507048 -140749535 + AluSq SINE Alu 1 312 -1 9232 200 6 22 chr2 112507048 112508041 -140748542 + L1 LINE L1 3255 4262 -1884 969 290 117 21 chr2 112508064 112508491 -140748092 + L3 LINE CR1 1107 1574 -3 322 297 85 18 chr2 112508555 112508720 -140747863 + L2 LINE L2 2678 2853 -461 1327 259 38 17 chr2 112508753 112509228 -140747355 + L1M4 LINE L1 3064 3548 -2598 303 320 129 49 chr2 112509426 112509586 -140746997 - HAL1 LINE L1 -1313 1194 1048 1899 121 33 39 chr2 112509586 112509893 -140746690 - AluSx SINE Alu -7 305 1 303 320 129 49 chr2 112509893 112510082 -140746501 - HAL1 LINE L1 -1459 1048 817 21 0 0 0 chr2 112510815 112510836 -140745747 + AT_rich Low_complexity Low_complexity 1 21 0 684 329 137 22 chr2 112510841 112511440 -140745143 + L2 LINE L2 1780 2447 -867 421 293 81 45 chr2 112511532 112511778 -140744805 + MLT1L LTR MaLR 8 262 -353 806 167 0 29 chr2 112512735 112512873 -140743710 + AluJo SINE Alu 1 134 -178 2480 91 0 0 chr2 112512874 112513183 -140743400 + AluSq SINE Alu 1 309 -4 354 228 30 40 chr2 112513605 112513706 -140742877 + MIR SINE MIR 57 156 -106 2279 95 3 3 chr2 112513725 112514021 -140742562 + AluSp SINE Alu 1 296 -17 5208 112 21 11 chr2 112514021 112514773 -140741810 + L1PA11 LINE L1 5414 6173 -1 387 226 88 78 chr2 112514803 112515020 -140741563 + L1MC5 LINE L1 7718 7936 -25 1708 187 42 76 chr2 112515382 112515443 -140741140 + MER21A LTR ERV1 511 573 -358 1901 149 14 0 chr2 112515443 112515739 -140740844 + AluSx SINE Alu 3 302 -10 1708 187 42 76 chr2 112515739 112516084 -140740499 + MER21A LTR ERV1 573 903 -28 378 216 11 0 chr2 112516109 112516197 -140740386 + L1MC4a LINE L1 6523 6611 -1197 21 36 0 0 chr2 112516223 112516251 -140740332 + AT_rich Low_complexity Low_complexity 1 28 0 183 80 0 0 chr2 112516264 112516289 -140740294 + (CATATA)n Simple_repeat Simple_repeat 6 30 0 759 98 0 27 chr2 112516303 112516415 -140740168 - MLT1D LTR MaLR -3 502 394 850 163 114 0 chr2 112516428 112516594 -140739989 - MLT1D LTR MaLR -289 216 32 3744 201 90 26 chr2 112516612 112517549 -140739034 + L1MC4 LINE L1 6632 7628 -414 2606 105 0 0 chr2 112517548 112517892 -140738691 + L1P3 LINE L1 1 344 -6117 * 592 201 179 0 chr2 112520028 112520207 -140736376 - L2 LINE L2 0 3313 3103 2453 66 0 16 chr2 112521126 112521431 -140735152 - AluY SINE Alu -11 300 1 348 293 121 96 chr2 112521645 112522085 -140734498 + L2 LINE L2 2448 2898 -416 1031 197 5 5 chr2 112522523 112522726 -140733857 - MER3 DNA MER1_type 0 209 7 1539 161 69 14 chr2 112522729 112523020 -140733563 - AluJb SINE Alu -5 307 1 830 162 7 7 chr2 112523022 112523164 -140733419 - FLAM_C SINE Alu -1 142 1 356 289 7 7 chr2 112523987 112524122 -140732461 + L1M3de LINE L1 826 960 -4995 2676 211 43 75 chr2 112524130 112524879 -140731704 + MER50 LTR ERV1 10 734 0 712 208 24 33 chr2 112524879 112525140 -140731443 + L1M3de LINE L1 935 1199 -4766 577 457 138 10 chr2 112525175 112525580 -140731003 + MER74B LTR ERVL 89 545 -77 247 308 125 0 chr2 112525520 112525624 -140730959 - MER88 LTR ERVL -311 153 37 * 2341 217 38 56 chr2 112525683 112526011 -140730572 + L1M4c LINE L1 1144 1476 -4908 3401 116 2 45 chr2 112526011 112526563 -140730020 - L1MA2 LINE L1 0 6304 5777 2341 217 38 56 chr2 112526563 112526952 -140729631 + L1M4c LINE L1 1476 1848 -4536 4638 111 66 23 chr2 112526990 112527768 -140728815 - MER4-int LTR ERV1 -1951 4647 3837 207 0 0 0 chr2 112527777 112527800 -140728783 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 2002 102 11 14 chr2 112527802 112528086 -140728497 - AluSp SINE Alu -30 283 1 1521 73 55 40 chr2 112528086 112528294 -140728289 - MER4-int LTR ERV1 -3585 3013 2799 2299 90 0 7 chr2 112528294 112528593 -140727990 - AluSc SINE Alu -12 297 1 1521 73 55 40 chr2 112528593 112528657 -140727926 - MER4-int LTR ERV1 -3799 2799 2737 1221 179 75 4 chr2 112528657 112528897 -140727686 + LTR8 LTR ERV1 1 257 -434 10664 119 109 56 chr2 112529015 112529573 -140727010 - MER4-int LTR ERV1 -4289 2309 1782 2181 109 7 3 chr2 112529573 112529876 -140726707 - AluY SINE Alu -7 304 1 10664 119 109 56 chr2 112529876 112530518 -140726065 - MER4-int LTR ERV1 -4816 1782 1176 2194 118 0 3 chr2 112530518 112530814 -140725769 + AluSq SINE Alu 1 295 -18 10664 119 109 56 chr2 112530814 112531599 -140724984 - MER4-int LTR ERV1 -5422 1176 193 261 0 0 0 chr2 112531599 112531628 -140724955 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 10664 119 109 56 chr2 112531628 112531832 -140724751 - MER4-int LTR ERV1 -6405 193 1 973 149 7 13 chr2 112531836 112531990 -140724593 - MER4B LTR ERV1 -1 609 457 10246 182 6 12 chr2 112532090 112533894 -140722689 - LTR1B-int LTR ERV1 -551 6098 4307 1756 119 24 0 chr2 112534258 112534509 -140722074 + AluSx SINE Alu 32 288 -24 686 258 40 106 chr2 112534509 112534904 -140721679 + L1ME3A LINE L1 5547 5915 -255 3243 252 15 22 chr2 112536191 112536977 -140719606 - LTR1B-int LTR ERV1 -2712 3937 3157 9121 188 51 27 chr2 112536981 112538825 -140717758 - LTR1B-int LTR ERV1 -1199 1889 2 1357 237 93 68 chr2 112538826 112539329 -140717254 - LTR1B LTR ERV1 0 826 311 29995 102 22 14 chr2 112539483 112544372 -140712211 + L1PA7 LINE L1 336 5185 -1284 2307 99 0 0 chr2 112544372 112544665 -140711918 + AluY SINE Alu 1 293 -18 29995 102 22 14 chr2 112544665 112545158 -140711425 + L1PA7 LINE L1 5185 5673 -796 2380 92 0 0 chr2 112545158 112545462 -140711121 + AluY SINE Alu 1 304 -7 29995 102 22 14 chr2 112545462 112546128 -140710455 + L1PA7 LINE L1 5673 6469 0 2261 70 10 20 chr2 112546137 112546437 -140710146 + AluY SINE Alu 1 297 -14 1173 178 181 33 chr2 112546437 112546791 -140709792 + L1MC4 LINE L1 7618 8024 -18 2635 138 19 5 chr2 112546918 112547332 -140709251 - LOR1b LTR ERV1 0 461 42 633 114 0 0 chr2 112547368 112547456 -140709127 - LOR1b-int LTR ERV1 -3 8117 8030 * 1976 74 0 19 chr2 112547455 112547726 -140708857 - LOR1b-int LTR ERV1 -2056 6064 5799 * 20975 108 39 28 chr2 112547714 112551250 -140705333 - LOR1b-int LTR ERV1 -2596 5524 2030 2244 104 3 13 chr2 112551250 112551557 -140705026 - AluY SINE Alu -7 304 1 20975 108 39 28 chr2 112551557 112552616 -140703967 - LOR1b-int LTR ERV1 -6090 2030 984 2099 122 11 0 chr2 112552616 112552902 -140703681 + AluSx SINE Alu 1 289 -23 20975 108 39 28 chr2 112552902 112553498 -140703085 - LOR1b-int LTR ERV1 -7136 984 269 2338 84 0 7 chr2 112553498 112553795 -140702788 + AluY SINE Alu 1 295 -16 20975 108 39 28 chr2 112553795 112553865 -140702718 - LOR1b-int LTR ERV1 -7851 269 201 1950 162 28 8 chr2 112553875 112554239 -140702344 - LOR1b-int LTR ERV1 -7749 371 1 2507 158 40 2 chr2 112554239 112554683 -140701900 - LOR1b LTR ERV1 0 461 1 1579 172 25 73 chr2 112554800 112555208 -140701375 + MLT1B LTR MaLR 1 388 -2 2203 125 58 12 chr2 112555282 112555713 -140700870 + MER61C LTR ERV1 1 434 0 22 35 0 0 chr2 112555758 112555787 -140700796 + AT_rich Low_complexity Low_complexity 1 29 0 2430 78 0 0 chr2 112555904 112556200 -140700383 + AluSp SINE Alu 1 296 -17 2267 129 3 0 chr2 112556397 112556708 -140699875 + AluSx SINE Alu 1 312 0 380 149 46 11 chr2 112557103 112557190 -140699393 + L1ME4a LINE L1 6031 6120 -1 219 186 0 0 chr2 112558033 112558076 -140698507 + (TG)n Simple_repeat Simple_repeat 2 44 0 330 250 0 0 chr2 112558076 112558164 -140698419 + (CA)n Simple_repeat Simple_repeat 2 89 0 185 301 65 32 chr2 112560239 112560332 -140696251 + MIR3 SINE MIR 111 206 -2 498 271 71 7 chr2 112560344 112560499 -140696084 - MIR SINE MIR -8 254 90 205 261 14 14 chr2 112560602 112560671 -140695912 - MIR3 SINE MIR -5 203 135 2293 86 3 3 chr2 112560823 112561115 -140695468 + AluSx SINE Alu 1 292 -20 1795 80 0 0 chr2 112562064 112562288 -140694295 - AluSq SINE Alu -11 302 79 372 191 56 105 chr2 112562340 112562502 -140694081 + L1MC5 LINE L1 7732 7885 -76 199 258 258 0 chr2 112562755 112562883 -140693700 + MIR3 SINE MIR 42 202 -6 2392 107 0 0 chr2 112562905 112563214 -140693369 - AluSc SINE Alu 0 309 1 1518 143 0 0 chr2 112563725 112563942 -140692641 + AluSx SINE Alu 1 217 -95 8628 193 47 42 chr2 112564044 112566451 -140690132 - L1 LINE L1 -1353 4793 2376 207 0 0 0 chr2 112566451 112566474 -140690109 + (T)n Simple_repeat Simple_repeat 1 23 0 334 287 98 11 chr2 112566746 112566920 -140689663 + MIR SINE MIR 63 251 -11 472 249 99 44 chr2 112567009 112567190 -140689393 - MIR SINE MIR -70 192 2 1641 138 21 24 chr2 112567233 112567523 -140689060 - AluY SINE Alu -19 292 4 2294 156 66 29 chr2 112567545 112567924 -140688659 - L1M1 LINE L1 -734 5569 5205 1570 186 7 4 chr2 112567924 112568204 -140688379 + AluJo SINE Alu 21 301 -11 2294 156 66 29 chr2 112568204 112568585 -140687998 - L1M1 LINE L1 -1098 5205 4792 355 246 12 12 chr2 112569004 112569121 -140687462 - L1 LINE L1 -3654 3194 3078 225 0 0 0 chr2 112569121 112569146 -140687437 + (T)n Simple_repeat Simple_repeat 1 25 0 530 139 0 0 chr2 112569182 112569261 -140687322 + AluSg/x SINE Alu 168 246 -66 1872 117 12 4 chr2 112569261 112569518 -140687065 - AluSq SINE Alu -54 259 1 11053 189 77 34 chr2 112569550 112570084 -140686499 - L1 LINE L1 -3820 3028 2518 2214 136 101 20 chr2 112570084 112570480 -140686103 + MSTA LTR MaLR 1 428 0 11053 189 77 34 chr2 112570480 112570867 -140685716 - L1 LINE L1 -4330 2518 2149 2102 122 10 3 chr2 112570867 112571171 -140685412 - AluSq SINE Alu -7 306 1 11053 189 77 34 chr2 112571171 112571189 -140685394 - L1 LINE L1 -4699 2149 2133 2438 106 0 0 chr2 112571189 112571501 -140685082 - AluSx SINE Alu 0 312 1 11053 189 77 34 chr2 112571501 112573314 -140683269 - L1 LINE L1 -4715 2133 155 245 163 0 0 chr2 112573315 112573358 -140683225 - MSTB LTR MaLR 0 426 384 200 149 21 0 chr2 112573372 112573419 -140683164 + GA-rich Low_complexity Low_complexity 2 49 0 2238 138 20 20 chr2 112573419 112573810 -140682773 - MSTB LTR MaLR -35 391 1 716 140 40 20 chr2 112573811 112573961 -140682622 - L1 LINE L1 -6696 153 1 2088 138 35 0 chr2 112573995 112574342 -140682241 - L1PB3 LINE L1 -2 6152 5794 989 101 0 7 chr2 112574352 112574501 -140682082 - L1PB3 LINE L1 -522 5632 5485 838 127 16 0 chr2 112574504 112574630 -140681953 - AluSg/x SINE Alu -23 286 159 1104 84 36 10 chr2 112574630 112574863 -140681720 - L1PB3 LINE L1 -704 5450 5213 590 167 0 9 chr2 112574871 112574979 -140681604 - AluY SINE Alu -204 107 1 2232 109 0 3 chr2 112575096 112575411 -140681172 - AluY SINE Alu 0 311 1 437 267 235 34 chr2 112575447 112576120 -140680463 - L1PB3 LINE L1 -1131 5015 4153 480 209 157 0 chr2 112576120 112576235 -140680348 - FLAM_C SINE Alu 0 133 1 437 267 235 34 chr2 112576235 112576309 -140680274 - L1PB3 LINE L1 -1993 4153 4095 430 321 59 5 chr2 112576305 112576694 -140679889 - L1M4 LINE L1 -2388 3758 3349 * 2131 126 0 13 chr2 112576695 112577004 -140679579 - AluSx SINE Alu -7 305 1 280 270 57 62 chr2 112577219 112577589 -140678994 - HAL1 LINE L1 -2132 375 8 21 0 0 0 chr2 112577815 112577836 -140678747 + AT_rich Low_complexity Low_complexity 1 21 0 211 296 184 10 chr2 112581789 112581887 -140674696 - L2 LINE L2 -1 3312 3198 253 260 83 0 chr2 112582179 112582275 -140674308 - MIR SINE MIR -72 190 87 1289 251 130 70 chr2 112582357 112582509 -140674074 - L2 LINE L2 -942 2372 2231 2303 79 3 16 chr2 112582509 112582813 -140673770 + AluY SINE Alu 1 300 -11 1289 251 130 70 chr2 112582813 112583322 -140673261 - L2 LINE L2 -1083 2231 1671 465 287 50 6 chr2 112583407 112583588 -140672995 - L2 LINE L2 -1636 1678 1490 1979 108 4 0 chr2 112584703 112584980 -140671603 - AluSg SINE Alu -32 278 1 212 309 21 41 chr2 112585321 112585418 -140671165 - L2 LINE L2 -14 3299 3205 2294 89 7 7 chr2 112585557 112585861 -140670722 - AluY SINE Alu -7 304 1 303 288 130 45 chr2 112586202 112586379 -140670204 - L2 LINE L2 -14 3299 3108 367 315 113 31 chr2 112586490 112586782 -140669801 + L1M4 LINE L1 4502 4817 -1329 557 232 45 126 chr2 112586809 112587055 -140669528 - MIR SINE MIR -33 229 4 1578 183 0 0 chr2 112587266 112587518 -140669065 + AluSx SINE Alu 1 252 -60 1406 99 142 13 chr2 112588472 112588704 -140667879 + AluSx SINE Alu 36 297 -15 2063 138 0 0 chr2 112588885 112589175 -140667408 + AluSx SINE Alu 1 290 -22 2125 112 14 3 chr2 112589228 112589523 -140667060 + AluSx SINE Alu 1 298 -14 5005 96 21 3 chr2 112589708 112590426 -140666157 + L1PA13 LINE L1 5428 6158 -5 21 0 0 0 chr2 112591396 112591417 -140665166 + AT_rich Low_complexity Low_complexity 1 21 0 207 108 27 0 chr2 112591537 112591574 -140665009 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 2378 85 0 13 chr2 112592187 112592493 -140664090 - AluY SINE Alu -9 302 1 181 30 91 0 chr2 112592723 112592756 -140663827 + (TTCTG)n Simple_repeat Simple_repeat 2 37 0 1880 145 0 4 chr2 112592762 112593038 -140663545 - AluSx SINE Alu -37 275 1 1700 102 11 4 chr2 112594025 112594291 -140662292 + PABL_A LTR ERV1 391 658 -2 628 126 165 0 chr2 112594292 112594395 -140662188 + AluJb SINE Alu 162 281 -31 253 125 36 0 chr2 112594396 112594452 -140662131 + CT-rich Low_complexity Low_complexity 1 58 0 188 286 132 44 chr2 112594655 112594746 -140661837 + MER5A DNA MER1_type 1 99 -90 2036 130 10 3 chr2 112594866 112595165 -140661418 - AluSq SINE Alu -12 301 1 791 201 34 112 chr2 112595242 112595636 -140660947 - L1MC5 LINE L1 -218 7743 7387 1912 82 4 22 chr2 112595636 112595904 -140660679 - AluSq SINE Alu -45 268 6 791 201 34 112 chr2 112595904 112595957 -140660626 - L1MC5 LINE L1 -574 7387 7331 332 138 35 0 chr2 112595959 112596017 -140660566 - Charlie1 DNA MER1_type -1 2760 2701 545 194 9 0 chr2 112596022 112596130 -140660453 + MLT-int LTR MaLR 1492 1600 -135 278 244 37 0 chr2 112596152 112596234 -140660349 - MER58 DNA MER1_type -2330 90 6 248 278 24 32 chr2 112596251 112596377 -140660206 - L1MC5 LINE L1 -765 7196 7072 942 160 0 29 chr2 112596640 112596815 -140659768 - FRAM SINE Alu -5 171 2 297 275 0 0 chr2 112599426 112599495 -140657088 + L2 LINE L2 3245 3313 0 1712 92 0 4 chr2 112599653 112599882 -140656701 - AluSc SINE Alu 0 309 82 305 234 45 45 chr2 112600033 112600187 -140656396 + L1M4 LINE L1 4560 4713 -1433 24 32 0 0 chr2 112600410 112600441 -140656142 + AT_rich Low_complexity Low_complexity 1 31 0 2373 87 0 13 chr2 112600584 112600896 -140655687 + AluY SINE Alu 1 308 -3 2390 75 0 3 chr2 112600906 112601199 -140655384 + AluY SINE Alu 3 294 -17 1889 122 23 43 chr2 112601209 112601513 -140655070 + AluJo SINE Alu 1 298 -14 530 239 54 0 chr2 112601520 112601650 -140654933 - L1MB7 LINE L1 -11 6173 6037 323 146 55 6 chr2 112601662 112601826 -140654757 + (TA)n Simple_repeat Simple_repeat 1 172 0 369 0 0 0 chr2 112601860 112601901 -140654682 + (CA)n Simple_repeat Simple_repeat 1 41 0 1281 160 9 0 chr2 112602053 112602272 -140654311 + AluSg/x SINE Alu 84 304 -8 262 291 154 22 chr2 112602275 112602457 -140654126 - L2 LINE L2 -493 2821 2616 461 325 187 32 chr2 112602466 112603012 -140653571 - L2 LINE L2 -887 2427 1752 2518 65 3 0 chr2 112603012 112603320 -140653263 + AluY SINE Alu 1 309 -2 461 325 187 32 chr2 112603320 112603459 -140653124 - L2 LINE L2 -1562 1752 1636 459 0 0 0 chr2 112604391 112604442 -140652141 + (TG)n Simple_repeat Simple_repeat 2 52 0 756 176 7 29 chr2 112604466 112604602 -140651981 - FLAM_C SINE Alu 0 133 1 1307 163 111 0 chr2 112606313 112606565 -140650018 - L1MA6 LINE L1 0 6300 6021 * 1924 177 92 62 chr2 112606559 112607091 -140649492 - L1 LINE L1 -2941 3205 2658 214 288 17 0 chr2 112607322 112607381 -140649202 + (TATATG)n Simple_repeat Simple_repeat 3 62 0 217 316 111 26 chr2 112607699 112607816 -140648767 - L2 LINE L2 -221 3051 2925 * 396 296 114 27 chr2 112607812 112608061 -140648522 + L2 LINE L2 2713 3271 -1 309 288 38 0 chr2 112608288 112608368 -140648215 - L2 LINE L2 -2 3270 3188 1742 182 0 0 chr2 112608580 112608860 -140647723 - AluJo SINE Alu -32 280 1 2432 103 0 0 chr2 112608883 112609195 -140647388 - AluSx SINE Alu 0 312 1 349 257 118 1 chr2 112609801 112609911 -140646672 + MIR SINE MIR 34 151 -68 1135 180 3 0 chr2 112609990 112610206 -140646377 - L1ME LINE L1 -370 5796 5577 216 282 0 24 chr2 112610408 112610493 -140646090 + T-rich Low_complexity Low_complexity 1 83 0 23 0 0 0 chr2 112611190 112611213 -140645370 + AT_rich Low_complexity Low_complexity 1 23 0 180 265 145 34 chr2 112611465 112611582 -140645001 - MIR SINE MIR -11 251 122 1011 213 129 7 chr2 112611700 112611987 -140644596 - MER33 DNA MER1_type -2 322 1 180 0 0 0 chr2 112612722 112612742 -140643841 + (TTG)n Simple_repeat Simple_repeat 2 21 0 427 125 62 12 chr2 112612908 112612988 -140643595 - L1MB2 LINE L1 0 6171 6088 1315 103 23 0 chr2 112613645 112613820 -140642763 + AluSp SINE Alu 1 179 -134 2246 106 3 0 chr2 112614104 112614396 -140642187 + AluSx SINE Alu 1 293 -19 249 311 16 0 chr2 112615077 112615138 -140641445 - L2 LINE L2 -95 3177 3116 2142 116 0 10 chr2 112616336 112616639 -140639944 - AluSg SINE Alu -10 300 1 837 208 186 25 chr2 112616946 112617225 -140639358 - MER5C DNA MER1_type 0 324 1 237 65 0 0 chr2 112617247 112617278 -140639305 + (TTTTC)n Simple_repeat Simple_repeat 5 35 0 224 326 31 39 chr2 112617375 112617504 -140639079 - MIR SINE MIR -6 256 129 636 325 46 20 chr2 112617527 112617832 -140638751 - L2 LINE L2 -6 3307 2995 391 288 17 17 chr2 112618604 112618755 -140637828 - MIR SINE MIR -67 141 15 675 134 62 0 chr2 112620220 112620345 -140636238 - FLAM_A SINE Alu 0 143 13 2305 100 0 0 chr2 112620363 112620654 -140635929 - AluSg SINE Alu -19 291 1 188 292 31 46 chr2 112620696 112620761 -140635822 - L2 LINE L2 -68 3204 3141 234 273 141 20 chr2 112621072 112621171 -140635412 + L2 LINE L2 3139 3249 -23 2148 94 0 21 chr2 112621848 112622162 -140634421 - AluSg SINE Alu 0 308 1 2438 85 0 3 chr2 112622541 112622847 -140633736 - AluY SINE Alu -6 305 1 240 238 88 0 chr2 112623387 112623467 -140633116 - L1ME3A LINE L1 0 6170 6084 203 247 78 0 chr2 112623628 112623705 -140632878 - L2 LINE L2 -2 3270 3188 352 311 81 43 chr2 112624494 112624816 -140631767 - L2 LINE L2 -657 2657 2324 741 329 26 10 chr2 112625190 112625494 -140631089 + MER93a LTR ERV1 91 399 -3 2336 101 3 0 chr2 112625608 112625915 -140630668 + AluSq SINE Alu 1 308 -5 388 272 13 70 chr2 112626161 112626319 -140630264 + MER20B DNA MER1_type 3 151 -632 1875 164 3 20 chr2 112626439 112626743 -140629840 + AluSx SINE Alu 1 299 -13 262 289 72 0 chr2 112626751 112626848 -140629735 + MER20B DNA MER1_type 280 383 -400 188 33 0 33 chr2 112626977 112627007 -140629576 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1938 101 25 39 chr2 112627009 112627295 -140629288 - AluSq SINE Alu -31 282 1 2168 118 10 0 chr2 112627649 112627946 -140628637 - AluSx SINE Alu -12 300 1 234 337 32 32 chr2 112628156 112628251 -140628332 - L2 LINE L2 -20 3252 3158 185 306 71 24 chr2 112628334 112628419 -140628164 + MIR SINE MIR 82 170 -92 807 129 17 0 chr2 112628823 112628939 -140627644 + AluSq/x SINE Alu 2 119 -194 327 133 0 0 chr2 112629039 112629084 -140627499 - AluJo SINE Alu -30 272 228 972 140 0 73 chr2 112629085 112629264 -140627319 - AluJo SINE Alu -142 170 5 300 296 66 26 chr2 112629267 112629419 -140627164 - L1ME LINE L1 -428 5693 5536 280 268 158 12 chr2 112629419 112629501 -140627082 + AluJo SINE Alu 127 220 -82 21 57 0 0 chr2 112629704 112629739 -140626844 + AT_rich Low_complexity Low_complexity 1 35 0 2178 109 0 7 chr2 112629842 112630144 -140626439 - AluSx SINE Alu -12 300 1 219 36 0 0 chr2 112630261 112630289 -140626294 + (T)n Simple_repeat Simple_repeat 1 28 0 2302 60 30 17 chr2 112630517 112630816 -140625767 - AluSp SINE Alu -10 303 1 210 23 70 23 chr2 112631745 112631788 -140624795 + (CCGGG)n Simple_repeat Simple_repeat 2 46 0 3324 192 136 64 chr2 112632000 112633106 -140623477 - Charlie1a DNA MER1_type 0 1455 271 1116 137 14 38 chr2 112633312 112633523 -140623060 - L1MB3 LINE L1 -78 6105 5900 * 1248 180 51 44 chr2 112633519 112633671 -140622912 - L1MD2 LINE L1 -514 5845 5689 1601 173 16 49 chr2 112633671 112633978 -140622605 - AluJb SINE Alu -15 297 1 1248 180 51 44 chr2 112633978 112634120 -140622463 - L1MD2 LINE L1 -670 5689 5549 988 208 77 39 chr2 112634125 112634385 -140622198 - Charlie1a DNA MER1_type -1185 270 1 1036 156 17 0 chr2 112635795 112635968 -140620615 - L1MB3 LINE L1 -9 6174 5999 343 276 79 0 chr2 112636036 112636163 -140620420 - L1ME4a LINE L1 -295 5826 5690 1771 175 7 3 chr2 112636171 112636474 -140620109 - AluJb SINE Alu -8 304 1 270 163 0 20 chr2 112636694 112636743 -140619840 - Alu SINE Alu -250 49 2 316 297 96 6 chr2 112636764 112636929 -140619654 + MIR SINE MIR 13 189 -64 307 253 63 0 chr2 112637022 112637101 -140619482 + L1MC4a LINE L1 6080 6163 -1645 187 293 0 0 chr2 112637102 112637143 -140619440 + L2 LINE L2 3253 3293 -20 2394 86 3 0 chr2 112637550 112637853 -140618730 - AluY SINE Alu -7 304 1 267 344 62 0 chr2 112638077 112638173 -140618410 - MIR SINE MIR -59 149 48 441 266 103 38 chr2 112639700 112639884 -140616699 - MIR SINE MIR -50 212 17 1163 146 0 0 chr2 112640506 112640670 -140615913 + AluJo SINE Alu 3 166 -146 1365 109 10 10 chr2 112640670 112640871 -140615712 + PABL_A LTR ERV1 1 201 -459 240 35 0 0 chr2 112641015 112641044 -140615539 + (TA)n Simple_repeat Simple_repeat 1 29 0 188 146 49 0 chr2 112641118 112641159 -140615424 + (TATATG)n Simple_repeat Simple_repeat 2 44 0 328 163 18 48 chr2 112641172 112641466 -140615117 + (TA)n Simple_repeat Simple_repeat 1 285 0 31 44 0 0 chr2 112641491 112641536 -140615047 + AT_rich Low_complexity Low_complexity 1 45 0 189 109 55 0 chr2 112641551 112641606 -140614977 + (TA)n Simple_repeat Simple_repeat 1 58 0 252 0 0 0 chr2 112641647 112641675 -140614908 + (TG)n Simple_repeat Simple_repeat 2 29 0 1459 178 91 4 chr2 112641675 112641939 -140614644 - AluJb SINE Alu -25 287 1 224 308 51 0 chr2 112642543 112642621 -140613962 - MIR3 SINE MIR 0 208 127 232 287 72 121 chr2 112642998 112643158 -140613425 - MIR SINE MIR -59 149 18 434 241 184 35 chr2 112643904 112644045 -140612538 + MER5A DNA MER1_type 26 187 -2 663 269 21 33 chr2 112644348 112644590 -140611993 + MLT1L LTR MaLR 368 606 -9 203 133 0 0 chr2 112644924 112644954 -140611629 + MIR SINE MIR 113 142 -66 2846 131 131 40 chr2 112645046 112645602 -140610981 - L1MB4 LINE L1 0 6180 5574 3170 56 56 2 chr2 112645699 112646110 -140610473 + LTR3b LTR ERVK 1 433 -4 1868 148 4 0 chr2 112646161 112646439 -140610144 - AluJo SINE Alu -33 279 1 2048 133 3 0 chr2 112646583 112646876 -140609707 - AluSx SINE Alu -16 296 3 2332 82 27 0 chr2 112647277 112647569 -140609014 - AluY SINE Alu -9 302 3 2339 105 0 6 chr2 112647719 112648033 -140608550 - AluSx SINE Alu 0 312 1 235 203 17 34 chr2 112648934 112648993 -140607590 - L2 LINE L2 -25 3288 3231 1350 275 74 41 chr2 112649212 112649907 -140606676 + L2 LINE L2 2587 3309 -4 875 86 16 15 chr2 112650219 112650359 -140606224 - L1M4 LINE L1 -568 5598 5473 441 291 9 11 chr2 112650375 112650523 -140606060 - MIR SINE MIR -63 145 52 213 216 20 0 chr2 112650529 112650580 -140606003 + (TG)n Simple_repeat Simple_repeat 2 53 0 12228 122 42 18 chr2 112650597 112650799 -140605784 + Tigger1 DNA MER2_type 24 220 -2198 2359 92 0 7 chr2 112650799 112651104 -140605479 - AluSc SINE Alu -6 303 1 12228 122 42 18 chr2 112651104 112652840 -140603743 + Tigger1 DNA MER2_type 220 2044 -374 1793 148 65 3 chr2 112652840 112653131 -140603452 + AluJo SINE Alu 1 309 -3 12228 122 42 18 chr2 112653131 112653516 -140603067 + Tigger1 DNA MER2_type 2044 2418 0 588 215 61 66 chr2 112653516 112653674 -140602909 - MLT2D LTR ERVL -43 477 222 1424 179 55 52 chr2 112654726 112655090 -140601493 - MLT1A1 LTR MaLR 0 365 1 2377 69 0 6 chr2 112655267 112655585 -140600998 - LTR66 LTR ERVL -294 316 1 1108 103 7 0 chr2 112655587 112655732 -140600851 - AluSq/x SINE Alu -167 146 1 8116 164 54 25 chr2 112655732 112656673 -140599910 - L1 LINE L1 -1502 4644 3732 1532 173 6 67 chr2 112656673 112657002 -140599581 - AluJb SINE Alu -3 309 1 8116 164 54 25 chr2 112657002 112657412 -140599171 - L1 LINE L1 -2414 3732 3335 1058 135 262 37 chr2 112657412 112657656 -140598927 - AluSx SINE Alu 0 302 4 8116 164 54 25 chr2 112657656 112658092 -140598491 - L1 LINE L1 -2811 3335 2804 1299 179 75 4 chr2 112658094 112658374 -140598209 + MER58B DNA MER1_type 42 341 0 608 294 88 53 chr2 112658921 112659353 -140597230 + LTR67 LTR ERVL 101 547 -10 29 0 0 0 chr2 112659388 112659417 -140597166 + AT_rich Low_complexity Low_complexity 1 29 0 207 234 21 0 chr2 112660476 112660523 -140596060 - L2 LINE L2 0 3313 3266 1197 146 24 9 chr2 112660896 112661109 -140595474 + MLT1A1 LTR MaLR 1 216 -149 2417 64 0 3 chr2 112662224 112662520 -140594063 - AluSc SINE Alu -14 295 1 224 309 107 0 chr2 112662722 112662806 -140593777 + MIR SINE MIR 119 211 -51 21 36 0 0 chr2 112663749 112663777 -140592806 + AT_rich Low_complexity Low_complexity 1 28 0 2315 76 0 3 chr2 112663777 112664065 -140592518 + AluY SINE Alu 1 287 -24 423 0 0 0 chr2 112664065 112664112 -140592471 + (TG)n Simple_repeat Simple_repeat 2 48 0 800 156 7 30 chr2 112664130 112664265 -140592318 - FLAM_C SINE Alu -11 132 1 358 264 77 77 chr2 112664266 112664683 -140591900 - L1MC5 LINE L1 -48 7913 7497 471 200 17 33 chr2 112664761 112664881 -140591702 - L1MD3 LINE L1 0 7995 7878 605 306 62 19 chr2 112665039 112665248 -140591335 + MIR SINE MIR 32 249 -13 1510 145 8 0 chr2 112665514 112665749 -140590834 + AluJb SINE Alu 1 237 -75 776 128 0 37 chr2 112665754 112665941 -140590642 + (TA)n Simple_repeat Simple_repeat 1 180 0 195 42 0 0 chr2 112665967 112665991 -140590592 + (TA)n Simple_repeat Simple_repeat 2 25 0 349 233 55 20 chr2 112666169 112666315 -140590268 + L1MC4 LINE L1 7093 7243 -799 2185 100 0 0 chr2 112666447 112666727 -140589856 + AluSq SINE Alu 1 280 -33 734 0 0 11 chr2 112666727 112666814 -140589769 + (GAAA)n Simple_repeat Simple_repeat 3 88 0 271 262 54 84 chr2 112666920 112667290 -140589293 + L1MC4 LINE L1 7494 7852 -190 2274 85 0 10 chr2 112667568 112667863 -140588720 - AluY SINE Alu -19 292 1 3002 147 9 29 chr2 112667863 112667955 -140588628 - L1MB2 LINE L1 -262 5909 5817 2361 104 0 0 chr2 112667955 112668262 -140588321 - AluSq SINE Alu -6 307 1 3002 147 9 29 chr2 112668262 112668728 -140587855 - L1MB2 LINE L1 -354 5817 5362 577 68 0 0 chr2 112668855 112668929 -140587654 - AluY SINE Alu -13 299 226 1750 188 68 32 chr2 112668948 112669389 -140587194 + LTR2B LTR ERV1 34 490 0 8860 67 11 117 chr2 112669389 112670969 -140585614 + Harlequin LTR ERV1 1 1412 -5484 * 37542 68 7 6 chr2 112670956 112676035 -140580548 + Harlequin LTR ERV1 1814 6896 0 1734 196 68 25 chr2 112676056 112676494 -140580089 + LTR2B LTR ERV1 34 490 0 1587 104 13 13 chr2 112676494 112676724 -140579859 - AluY SINE Alu -81 230 1 2876 28 0 0 chr2 112677141 112677496 -140579087 - L1P LINE L1 -1064 5082 4728 4284 20 0 0 chr2 112677496 112677984 -140578599 + L1PA2 LINE L1 5662 6155 0 735 149 18 54 chr2 112679997 112680165 -140576418 + L1MA4A LINE L1 6142 6303 0 2338 98 3 3 chr2 112680550 112680856 -140575727 - AluSq SINE Alu -7 306 1 2193 113 3 0 chr2 112681884 112682177 -140574406 + AluSx SINE Alu 2 295 -17 334 287 98 11 chr2 112682692 112682866 -140573717 + MIR SINE MIR 63 251 -11 472 249 99 44 chr2 112682955 112683136 -140573447 - MIR SINE MIR -70 192 2 277 200 0 0 chr2 112684226 112684281 -140572302 - L2 LINE L2 0 3313 3259 219 36 0 0 chr2 112685100 112685128 -140571455 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 250 314 37 99 chr2 112685182 112685373 -140571210 + MER5A DNA MER1_type 4 182 -7 483 254 74 32 chr2 112685666 112685855 -140570728 - MER105 DNA DNA -6 198 2 2374 62 3 0 chr2 112686437 112686725 -140569858 - AluY SINE Alu -22 289 1 256 348 54 22 chr2 112687285 112687377 -140569206 + MIR SINE MIR 36 130 -78 1814 176 3 3 chr2 112687429 112687725 -140568858 + AluSx SINE Alu 1 296 -16 2063 125 3 3 chr2 112688145 112688448 -140568135 - AluSg1 SINE Alu -6 303 1 2580 81 126 8 chr2 112688953 112688986 -140567597 - MLT2A1 LTR ERVL 0 444 416 269 26 0 26 chr2 112688986 112689025 -140567558 + (TGGA)n Simple_repeat Simple_repeat 1 38 0 2580 81 126 8 chr2 112689025 112689388 -140567195 - MLT2A1 LTR ERVL -28 416 1 21 57 0 0 chr2 112689400 112689435 -140567148 + AT_rich Low_complexity Low_complexity 1 35 0 253 270 35 43 chr2 112689817 112689932 -140566651 + MIR SINE MIR 69 182 -80 1895 79 4 4 chr2 112690513 112690753 -140565830 - AluY SINE Alu -71 240 1 308 265 102 36 chr2 112691359 112691521 -140565062 - L1MC5 LINE L1 -183 7778 7599 2365 97 0 3 chr2 112691521 112691831 -140564752 - AluSc SINE Alu 0 309 1 308 265 102 36 chr2 112691831 112691864 -140564719 - L1MC5 LINE L1 -362 7599 7570 2159 124 10 3 chr2 112693569 112693875 -140562708 + AluSc SINE Alu 1 308 -1 2041 102 32 3 chr2 112694338 112694622 -140561961 - AluSc SINE Alu -17 292 1 29 47 0 0 chr2 112694631 112694674 -140561909 + AT_rich Low_complexity Low_complexity 1 43 0 514 225 238 0 chr2 112694966 112695117 -140561466 - MER5A DNA MER1_type -1 188 2 303 154 77 0 chr2 112695117 112695182 -140561401 - L1MC5 LINE L1 -623 7338 7269 282 219 136 87 chr2 112695907 112695985 -140560598 + L1MEd LINE L1 936 1009 -5120 2232 92 24 0 chr2 112695985 112696280 -140560303 + AluSq SINE Alu 1 302 -11 282 219 136 87 chr2 112696280 112696611 -140559972 + L1MEd LINE L1 1009 1357 -4772 494 228 32 32 chr2 112697069 112697164 -140559419 - MER112 DNA MER1_type -6 254 157 1366 213 6 53 chr2 112697164 112697483 -140559100 + AluJo SINE Alu 1 304 -8 494 228 32 32 chr2 112697483 112697545 -140559038 - MER112 DNA MER1_type -102 158 97 437 238 21 70 chr2 112698706 112698849 -140557734 + MLT1E LTR MaLR 1 136 -457 358 76 167 0 chr2 112699068 112699134 -140557449 + MLT1E LTR MaLR 501 577 -16 257 176 0 0 chr2 112699312 112699363 -140557220 + L1ME1 LINE L1 5645 5695 -547 * 473 139 0 15 chr2 112699355 112699457 -140557126 + L1MB7 LINE L1 6079 6177 -1 * 1518 239 95 0 chr2 112699452 112699896 -140556687 + L1ME1 LINE L1 5676 6161 -5 1703 163 14 10 chr2 112700409 112700698 -140555885 + AluJb SINE Alu 5 294 -18 198 118 0 0 chr2 112700807 112700841 -140555742 + (T)n Simple_repeat Simple_repeat 1 34 0 666 169 130 13 chr2 112701310 112701464 -140555119 + AluJb SINE Alu 137 308 -4 2133 30 0 0 chr2 112703026 112703259 -140553324 - AluY SINE Alu -9 302 70 2042 115 14 11 chr2 112703470 112703756 -140552827 + AluSc SINE Alu 1 287 -22 1972 137 3 10 chr2 112704352 112704652 -140551931 + AluSx SINE Alu 1 298 -14 218 295 13 26 chr2 112705244 112705322 -140551261 + MIR SINE MIR 73 149 -113 2340 106 0 0 chr2 112705371 112705674 -140550909 + AluY SINE Alu 1 303 -8 1800 160 0 35 chr2 112706058 112706370 -140550213 - AluJb SINE Alu -11 301 1 2300 82 7 13 chr2 112706379 112706682 -140549901 - AluY SINE Alu -10 301 1 743 146 0 66 chr2 112706682 112706819 -140549764 - AluSq/x SINE Alu -167 146 19 2006 100 50 7 chr2 112707606 112707886 -140548697 + AluSx SINE Alu 6 297 -15 1360 177 13 0 chr2 112708249 112708524 -140548059 + MER33 DNA MER1_type 1 272 -52 2441 68 0 0 chr2 112708524 112708818 -140547765 + AluY SINE Alu 1 294 -17 1055 144 0 0 chr2 112709231 112709414 -140547169 - AluSg/x SINE Alu 0 309 127 2039 139 16 3 chr2 112709419 112709722 -140546861 - AluSx SINE Alu -5 307 1 360 236 11 56 chr2 112709949 112710038 -140546545 + L1MD3 LINE L1 6483 6567 -1428 673 205 121 11 chr2 112710097 112710356 -140546227 - L1MD3 LINE L1 -45 7950 7581 2965 167 10 47 chr2 112710364 112711075 -140545508 + L1MCb LINE L1 721 1457 -5107 2520 87 0 0 chr2 112711075 112711385 -140545198 + AluY SINE Alu 1 310 -1 2965 167 10 47 chr2 112711385 112711460 -140545123 + L1MCb LINE L1 1457 1533 -5031 1774 201 37 3 chr2 112711460 112711809 -140544774 + MLT1A1 LTR MaLR 2 362 -3 2965 167 10 47 chr2 112711809 112711890 -140544693 + L1MCb LINE L1 1533 1713 -4851 2221 111 0 3 chr2 112711890 112712187 -140544396 - AluSq SINE Alu -14 299 4 1296 219 3 3 chr2 112712204 112712491 -140544092 + L1M4 LINE L1 4955 5241 -905 1988 149 21 50 chr2 112712506 112712942 -140543641 + L1MC2 LINE L1 5922 6344 0 311 145 101 14 chr2 112712943 112713012 -140543571 + L1MDb LINE L1 1241 1315 -5114 * 1007 192 18 100 chr2 112712997 112713198 -140543385 + L1MDb LINE L1 2374 2590 -3836 2024 127 0 0 chr2 112713198 112713474 -140543109 + AluY SINE Alu 11 286 -25 1007 192 18 100 chr2 112713474 112713537 -140543046 + L1MDb LINE L1 2590 2657 -3769 1666 178 3 37 chr2 112713537 112713858 -140542725 + AluJo SINE Alu 1 310 -2 1007 192 18 100 chr2 112713858 112713983 -140542600 + L1MDb LINE L1 2657 2733 -3693 636 233 29 136 chr2 112713981 112714712 -140541871 + L1MC5 LINE L1 6709 7517 -525 * 2174 107 0 0 chr2 112714712 112714992 -140541591 + AluSq SINE Alu 1 280 -33 601 12 0 25 chr2 112714992 112715072 -140541511 + (GAAA)n Simple_repeat Simple_repeat 3 80 0 636 233 29 136 chr2 112715072 112715588 -140540995 + L1MC5 LINE L1 7515 7903 -139 2242 92 0 10 chr2 112715823 112716118 -140540465 - AluY SINE Alu -19 292 1 1155 203 10 59 chr2 112716118 112716210 -140540373 - L1MB2 LINE L1 -262 5909 5814 2074 126 10 0 chr2 112716210 112716512 -140540071 - AluSq SINE Alu -8 305 1 1155 203 10 59 chr2 112716512 112716724 -140539859 - L1MB2 LINE L1 -357 5814 5620 2253 94 13 3 chr2 112717208 112717506 -140539077 - AluSq SINE Alu -12 301 1 6496 120 14 23 chr2 112718506 112719545 -140537038 - L1MA2 LINE L1 -102 6202 5154 2090 101 0 17 chr2 112719545 112719865 -140536718 - AluSx SINE Alu 0 315 1 6496 120 14 23 chr2 112719865 112720406 -140536177 - L1MA2 LINE L1 -1150 5154 4634 396 0 0 0 chr2 112720406 112720450 -140536133 + (TTCTC)n Simple_repeat Simple_repeat 4 47 0 990 122 0 7 chr2 112720469 112720608 -140535975 - AluSg/x SINE Alu -33 277 140 2021 69 127 3 chr2 112720608 112720899 -140535684 - LTR66 LTR ERVL 0 610 284 3707 177 39 18 chr2 112721041 112721432 -140535151 + L1MB2 LINE L1 4887 5268 -903 2241 110 0 16 chr2 112721432 112721740 -140534843 + AluSg SINE Alu 1 303 -7 3707 177 39 18 chr2 112721740 112722372 -140534211 + L1MB2 LINE L1 5268 5941 -230 4923 151 40 29 chr2 112722373 112722751 -140533832 - MER6 DNA MER2_type -1 864 491 2178 137 0 6 chr2 112722751 112723065 -140533518 + AluSx SINE Alu 1 312 0 4923 151 40 29 chr2 112723065 112723541 -140533042 - MER6 DNA MER2_type -374 491 1 1158 146 40 53 chr2 112723541 112723726 -140532857 + L1MB2 LINE L1 5940 6123 -48 2338 99 0 0 chr2 112723726 112724020 -140532563 + AluSq SINE Alu 1 294 -19 1158 146 40 53 chr2 112724020 112724060 -140532523 + L1MB2 LINE L1 6123 6162 -9 421 217 100 8 chr2 112724124 112724244 -140532339 + MIR SINE MIR 62 192 -70 2735 26 0 3 chr2 112724557 112724865 -140531718 + AluY SINE Alu 1 307 -4 1002 125 0 7 chr2 112724884 112725020 -140531563 + AluSx SINE Alu 1 135 -177 1144 159 0 0 chr2 112725446 112725635 -140530948 + AluSx SINE Alu 119 307 -2 3820 157 43 60 chr2 112725635 112725895 -140530688 + L1MB2 LINE L1 5392 5655 -516 2664 39 0 3 chr2 112725895 112726206 -140530377 - AluY SINE Alu 0 311 2 3820 157 43 60 chr2 112726206 112726609 -140529974 + L1MB2 LINE L1 5655 6063 -108 1567 201 7 7 chr2 112726609 112726913 -140529670 + AluJo SINE Alu 9 312 0 3820 157 43 60 chr2 112726913 112726988 -140529595 + L1MB2 LINE L1 6063 6138 -33 2354 57 23 20 chr2 112726988 112727289 -140529294 + AluY SINE Alu 1 302 -9 2221 105 7 0 chr2 112727299 112727595 -140528988 + AluSp SINE Alu 1 298 -15 3820 157 43 60 chr2 112727595 112727632 -140528951 + L1MB2 LINE L1 6147 6167 -4 1996 108 0 0 chr2 112727783 112728041 -140528542 - AluSx SINE Alu -54 258 1 670 163 104 0 chr2 112728044 112728179 -140528404 - Tigger1 DNA MER2_type -828 1590 1442 1048 121 25 61 chr2 112728917 112728938 -140527645 - Tigger1 DNA MER2_type -942 1476 1456 1919 69 4 12 chr2 112728938 112729183 -140527400 + AluSq SINE Alu 63 305 -8 1048 121 25 61 chr2 112729183 112729201 -140527382 - Tigger1 DNA MER2_type -962 1456 1439 2945 13 0 0 chr2 112729201 112729519 -140527064 + AluYb8 SINE Alu 1 318 0 1048 121 25 61 chr2 112729519 112729676 -140526907 - Tigger1 DNA MER2_type -979 1439 1286 * 2958 129 11 11 chr2 112729674 112730125 -140526458 - Tigger1 DNA MER2_type -1865 553 103 1674 97 0 14 chr2 112730129 112730345 -140526238 + AluSx SINE Alu 6 218 -94 2683 61 3 0 chr2 112730345 112730671 -140525912 - PABL_A LTR ERV1 0 660 334 635 128 0 43 chr2 112730671 112730788 -140525795 - AluY SINE Alu -17 294 183 2137 92 38 44 chr2 112730788 112730925 -140525658 - PABL_A LTR ERV1 -345 315 179 2235 119 0 0 chr2 112730925 112731220 -140525363 + AluSg SINE Alu 1 295 -15 2137 92 38 44 chr2 112731220 112731399 -140525184 - PABL_A LTR ERV1 -481 179 1 574 125 0 0 chr2 112731399 112731479 -140525104 + AluSx SINE Alu 215 294 -18 596 225 0 0 chr2 112731479 112731590 -140524993 - Tigger1 DNA MER2_type -2307 111 1 480 108 0 0 chr2 112731595 112731669 -140524914 + L1MA9 LINE L1 6239 6312 0 2082 131 3 13 chr2 112731888 112732202 -140524381 + AluSx SINE Alu 2 312 0 405 231 51 82 chr2 112732267 112732317 -140524266 + MIR SINE MIR 74 124 -138 1886 154 3 19 chr2 112732317 112732629 -140523954 - AluJo SINE Alu -5 307 1 405 231 51 82 chr2 112732629 112732773 -140523810 + MIR SINE MIR 124 262 0 40 0 0 0 chr2 112732859 112732899 -140523684 + AT_rich Low_complexity Low_complexity 1 40 0 1908 147 3 3 chr2 112732899 112733185 -140523398 - AluSx SINE Alu -26 286 1 536 246 8 8 chr2 112733186 112733320 -140523263 - FRAM SINE Alu -17 159 26 250 211 100 11 chr2 112733584 112733674 -140522909 - L1ME4a LINE L1 0 6121 6024 894 195 0 6 chr2 112733977 112734141 -140522442 - FRAM SINE Alu -3 163 1 772 136 173 86 chr2 112734162 112734319 -140522264 - MER8 DNA MER2_type 0 239 56 2152 100 17 3 chr2 112734319 112734619 -140521964 - AluSx SINE Alu -7 305 2 772 136 173 86 chr2 112734619 112734681 -140521902 - MER8 DNA MER2_type -183 56 1 2121 83 38 10 chr2 112734750 112735040 -140521543 - AluY SINE Alu -13 298 1 213 292 45 34 chr2 112736511 112736600 -140519983 + MIR SINE MIR 24 113 -149 2339 71 16 10 chr2 112736733 112737041 -140519542 + AluSx SINE Alu 1 310 -2 1729 142 16 26 chr2 112737406 112737715 -140518868 - AluJb SINE Alu -6 306 1 1771 151 25 0 chr2 112737719 112738004 -140518579 - AluJb SINE Alu -20 292 1 1729 109 113 0 chr2 112738628 112738885 -140517698 + AluSg SINE Alu 20 305 -5 538 258 8 0 chr2 112739004 112739132 -140517451 - FLAM_A SINE Alu -1 141 13 2498 56 17 3 chr2 112739243 112739545 -140517038 - AluY SINE Alu -5 306 1 1237 258 145 26 chr2 112739610 112739863 -140516720 - HAL1 LINE L1 -303 2204 1982 252 0 0 0 chr2 112739863 112739891 -140516692 + (ATTG)n Simple_repeat Simple_repeat 1 28 0 1237 258 145 26 chr2 112739891 112740125 -140516458 - HAL1 LINE L1 -525 1982 1777 1689 100 4 4 chr2 112740125 112740356 -140516227 - AluSg/x SINE Alu -4 308 78 1237 258 145 26 chr2 112740356 112740515 -140516068 - HAL1 LINE L1 -730 1777 1480 362 229 268 0 chr2 112740537 112740720 -140515863 - HAL1 LINE L1 -1163 1344 1113 248 125 0 0 chr2 112740909 112740949 -140515634 + Alu SINE Alu 263 302 -6 286 282 59 0 chr2 112741201 112741286 -140515297 + MIR3 SINE MIR 65 154 -54 1902 92 111 0 chr2 112741450 112741711 -140514872 + AluSc SINE Alu 1 290 -19 311 74 0 37 chr2 112741787 112741841 -140514742 - AluSc SINE Alu -6 293 242 607 193 7 0 chr2 112741860 112741995 -140514588 - L1M4 LINE L1 -1673 4473 4338 2297 200 7 2 chr2 112741995 112742400 -140514183 + MER44D DNA MER2_type 1 407 -298 626 156 59 22 chr2 112742423 112742558 -140514025 - MLT1B LTR MaLR -46 344 205 5549 25 0 3 chr2 112742603 112743200 -140513383 - SVA Other Other -2 1384 790 1934 137 23 7 chr2 112743200 112743500 -140513083 + MER44D DNA MER2_type 398 574 -31 2163 117 10 0 chr2 112743574 112743873 -140512710 - AluSx SINE Alu -10 302 1 1358 224 14 3 chr2 112744271 112744561 -140512022 - AluJo SINE Alu -19 293 1 405 0 0 0 chr2 112744566 112744611 -140511972 + (ATG)n Simple_repeat Simple_repeat 1 45 0 2080 91 3 57 chr2 112744616 112744914 -140511669 - AluSx SINE Alu -30 282 1 1430 199 7 17 chr2 112745688 112745989 -140510594 - AluJo SINE Alu -14 298 1 485 196 49 55 chr2 112748164 112748272 -140508311 - L1MD3 LINE L1 -2 7993 7885 1541 118 35 4 chr2 112748272 112748501 -140508082 + MER46A DNA MER2_type 1 236 0 485 196 49 55 chr2 112748501 112748555 -140508028 - L1MD3 LINE L1 -110 7885 7832 * 1291 169 106 57 chr2 112748554 112748788 -140507795 - L1MD2 LINE L1 -214 6145 5885 2274 114 0 0 chr2 112748788 112749094 -140507489 - AluSx SINE Alu -6 306 1 1291 169 106 57 chr2 112749094 112749226 -140507357 - L1MD2 LINE L1 -474 5885 5761 1008 172 0 11 chr2 112749228 112749402 -140507181 - AluSg/x SINE Alu -4 308 137 436 171 57 0 chr2 112749403 112749491 -140507092 - L1MD2 LINE L1 -589 5770 5678 257 250 147 34 chr2 112750210 112750414 -140506169 - L2 LINE L2 -1892 1422 1196 257 203 0 16 chr2 112750759 112750823 -140505760 - L2 LINE L2 -2525 789 727 631 179 0 26 chr2 112750827 112750944 -140505639 + AluJo SINE Alu 86 199 -113 290 255 92 26 chr2 112751111 112751264 -140505319 - L2 LINE L2 -3065 249 87 765 236 84 10 chr2 112752793 112752996 -140503587 + MER58A DNA MER1_type 1 218 -6 232 188 159 0 chr2 112753215 112753284 -140503299 - Charlie1b DNA MER1_type -8 515 436 1749 109 7 82 chr2 112753286 112753298 -140503285 - AluSc SINE Alu -1 308 297 1658 97 58 0 chr2 112753298 112753524 -140503059 - AluSc SINE Alu 0 309 71 1749 109 7 82 chr2 112753524 112753686 -140502897 - AluSc SINE Alu -12 297 124 2439 64 0 3 chr2 112753686 112753984 -140502599 - AluY SINE Alu -14 297 1 1749 109 7 82 chr2 112753984 112754054 -140502529 - AluSc SINE Alu -185 124 88 2436 58 0 0 chr2 112754054 112754345 -140502238 - AluY SINE Alu -20 291 1 1749 109 7 82 chr2 112754345 112754401 -140502182 - AluSc SINE Alu -221 88 29 502 117 0 106 chr2 112754401 112754495 -140502088 - AluSc SINE Alu -225 84 1 1269 209 56 51 chr2 112754496 112754599 -140501984 - Charlie1b DNA MER1_type -2316 445 344 2262 110 0 3 chr2 112754599 112754900 -140501683 - AluSq SINE Alu -13 300 1 1269 209 56 51 chr2 112754900 112755091 -140501492 - Charlie1b DNA MER1_type -2417 344 146 2137 120 0 7 chr2 112755091 112755392 -140501191 + AluSc SINE Alu 1 299 -10 1269 209 56 51 chr2 112755392 112755527 -140501056 - Charlie1b DNA MER1_type -2615 146 13 2022 138 0 14 chr2 112755674 112755970 -140500613 + AluSg SINE Alu 1 292 -18 21 57 0 0 chr2 112756365 112756400 -140500183 + AT_rich Low_complexity Low_complexity 1 35 0 2244 97 7 10 chr2 112757157 112757466 -140499117 - AluSc SINE Alu -1 308 1 2424 76 0 22 chr2 112757466 112757782 -140498801 - AluY SINE Alu -2 309 1 189 0 0 0 chr2 112757782 112757803 -140498780 + (T)n Simple_repeat Simple_repeat 1 21 0 2226 74 7 7 chr2 112757971 112758267 -140498316 - AluSp SINE Alu -17 296 1 2168 112 0 7 chr2 112758278 112758574 -140498009 - AluSc SINE Alu -15 294 1 2422 78 0 3 chr2 112758753 112759059 -140497524 - AluY SINE Alu -6 305 1 462 169 39 0 chr2 112759113 112759190 -140497393 - AluJo/FRAM SINE Alu -35 277 198 239 227 0 0 chr2 112759191 112759235 -140497348 - AluJ/monomer SINE Alu -258 44 1 1754 139 10 31 chr2 112759261 112759549 -140497034 - AluJo SINE Alu -30 282 1 385 298 42 48 chr2 112759970 112760092 -140496491 + L3 LINE CR1 374 496 -1081 2212 106 3 10 chr2 112760092 112760394 -140496189 + AluSx SINE Alu 1 300 -12 385 298 42 48 chr2 112760394 112760439 -140496144 + L3 LINE CR1 496 540 -1037 522 234 133 79 chr2 112760915 112761269 -140495314 - L1MC4a LINE L1 -1916 5892 5520 414 346 144 12 chr2 112761312 112761569 -140495014 - L3 LINE CR1 -78 1499 1209 1951 141 20 23 chr2 112761872 112762178 -140494405 - AluJb SINE Alu -7 305 1 1992 129 0 32 chr2 112762179 112762490 -140494093 - AluSx SINE Alu -8 304 4 204 304 21 139 chr2 112763703 112763767 -140492816 + MER5A DNA MER1_type 2 72 -106 1814 158 33 9 chr2 112763767 112764103 -140492480 - L1MB8 LINE L1 -15 6163 5820 204 304 21 139 chr2 112764103 112764176 -140492407 + MER5A DNA MER1_type 72 112 -66 2216 92 0 44 chr2 112764176 112764491 -140492092 - AluY SINE Alu -10 301 1 204 304 21 139 chr2 112764491 112764546 -140492037 + MER5A DNA MER1_type 112 172 -6 237 220 34 0 chr2 112765146 112765205 -140491378 - L1ME4a LINE L1 -83 6038 5978 2255 108 3 3 chr2 112765261 112765568 -140491015 - AluSq SINE Alu -6 307 1 1573 168 4 8 chr2 112765576 112765838 -140490745 - AluJo SINE Alu -26 286 26 2186 97 14 0 chr2 112765838 112766127 -140490456 + AluSx SINE Alu 1 293 -19 227 216 0 0 chr2 112766127 112766164 -140490419 - AluJo SINE Alu -266 37 1 469 284 92 4 chr2 112766250 112766521 -140490062 - L1ME4a LINE L1 -294 5827 5533 1665 93 0 5 chr2 112766527 112766790 -140489793 - AluSg/x SINE Alu 0 331 70 202 164 73 73 chr2 112768109 112768164 -140488419 + MIR SINE MIR 187 241 -21 2329 57 0 67 chr2 112768461 112768777 -140487806 + AluY SINE Alu 1 295 -16 974 166 17 11 chr2 112769563 112769738 -140486845 - AluSg/x SINE Alu -3 309 134 229 267 0 0 chr2 112770658 112770733 -140485850 + A-rich Low_complexity Low_complexity 1 75 0 1758 177 7 13 chr2 112771364 112771663 -140484920 - AluJb SINE Alu -15 297 1 2129 110 0 0 chr2 112771693 112771994 -140484589 - AluSx SINE Alu 0 301 1 354 328 57 8 chr2 112772642 112772764 -140483819 + MIR SINE MIR 24 151 -57 1964 132 14 10 chr2 112773988 112774284 -140482299 + AluSx SINE Alu 3 299 -13 23 54 0 0 chr2 112774336 112774373 -140482210 + AT_rich Low_complexity Low_complexity 1 37 0 622 284 57 24 chr2 112775157 112775368 -140481215 - MIR SINE MIR -21 241 24 294 322 25 26 chr2 112775872 112776045 -140480538 - MIR SINE MIR -58 150 24 386 246 121 60 chr2 112776176 112776408 -140480175 - L1ME4a LINE L1 -103 6018 5773 30 0 0 0 chr2 112777076 112777106 -140479477 + AT_rich Low_complexity Low_complexity 1 30 0 984 203 31 51 chr2 112778511 112778767 -140477816 + MIR SINE MIR 2 252 -10 297 51 0 0 chr2 112778769 112778808 -140477775 + (CAT)n Simple_repeat Simple_repeat 1 39 0 844 94 86 0 chr2 112778940 112779068 -140477515 - MER85 DNA T2_type 0 139 1 1901 162 0 3 chr2 112784721 112785018 -140471565 + AluSx SINE Alu 1 296 -16 376 305 106 0 chr2 112786139 112786280 -140470303 - MIR3 SINE MIR -8 200 45 827 210 0 7 chr2 112786449 112786592 -140469991 + FRAM SINE Alu 5 146 -30 216 0 0 0 chr2 112786592 112786616 -140469967 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 987 143 64 75 chr2 112786616 112786910 -140469673 - MER33 DNA MER1_type -50 274 1 195 254 36 18 chr2 112788018 112788073 -140468510 - L2 LINE L2 -3 3310 3255 21 0 0 0 chr2 112788076 112788097 -140468486 + AT_rich Low_complexity Low_complexity 1 21 0 1744 128 0 4 chr2 112789086 112789337 -140467246 - AluSq SINE Alu -11 302 53 622 231 39 34 chr2 112789457 112789617 -140466966 + L1M4 LINE L1 4448 4611 -1535 2343 70 0 23 chr2 112789617 112789917 -140466666 - AluSc SINE Alu -16 293 1 622 231 39 34 chr2 112789917 112789964 -140466619 + L1M4 LINE L1 4611 4656 -1490 303 118 59 0 chr2 112789976 112790027 -140466556 - L1MC1 LINE L1 -137 6196 6143 556 251 119 51 chr2 112790035 112790284 -140466299 - L1M4 LINE L1 -2215 3931 3644 956 149 18 30 chr2 112790284 112790452 -140466131 + FAM SINE Alu 1 166 -9 556 251 119 51 chr2 112790452 112790596 -140465987 - L1M4 LINE L1 -2502 3644 3511 991 219 130 16 chr2 112790612 112790661 -140465922 - L1M4 LINE L1 -2992 3154 3112 2008 100 53 17 chr2 112790661 112790962 -140465621 - AluSx SINE Alu 0 312 1 991 219 130 16 chr2 112790962 112791351 -140465232 - L1M4 LINE L1 -3034 3112 2666 380 271 44 70 chr2 112791342 112791615 -140464968 - L1MDa LINE L1 -6256 284 19 * 419 309 105 35 chr2 112793294 112793608 -140462975 - L1M4 LINE L1 -2159 3987 3652 269 241 0 76 chr2 112794526 112794605 -140461978 + MER5B DNA MER1_type 105 177 -1 1980 153 0 10 chr2 112794693 112795000 -140461583 - AluJo SINE Alu -8 304 1 2026 127 16 13 chr2 112795128 112795435 -140461148 - AluSx SINE Alu -4 308 1 1397 145 0 30 chr2 112796150 112796385 -140460198 - AluSg/x SINE Alu 0 312 85 642 183 17 0 chr2 112796385 112796500 -140460083 - AluSq SINE Alu -63 250 134 2059 92 28 21 chr2 112796501 112796669 -140459914 - AluSx SINE Alu -13 299 127 2455 84 3 0 chr2 112796669 112796979 -140459604 - AluSp SINE Alu -2 311 1 2059 92 28 21 chr2 112796979 112797092 -140459491 - AluSx SINE Alu -185 127 16 21 36 0 0 chr2 112797103 112797131 -140459452 + AT_rich Low_complexity Low_complexity 1 28 0 1767 157 33 16 chr2 112799027 112799333 -140457250 + AluJo SINE Alu 1 311 -1 26 64 0 0 chr2 112799516 112799563 -140457020 + AT_rich Low_complexity Low_complexity 1 47 0 641 129 29 72 chr2 112802223 112802362 -140454221 - FLAM_A SINE Alu 0 133 1 1952 203 100 36 chr2 112803196 112803959 -140452624 - L1MD3 LINE L1 0 8039 7262 2384 70 0 3 chr2 112804107 112804405 -140452178 + AluSq SINE Alu 1 297 -16 2523 46 3 10 chr2 112804407 112804713 -140451870 + AluY SINE Alu 1 304 -7 2096 129 10 3 chr2 112805281 112805591 -140450992 + AluSx SINE Alu 1 312 0 287 253 40 0 chr2 112806046 112806121 -140450462 + MIR SINE MIR 184 261 -1 757 172 0 0 chr2 112806389 112806511 -140450072 + MER33 DNA MER1_type 1 122 -202 1304 83 6 0 chr2 112806516 112806685 -140449898 + AluSg/x SINE Alu 127 296 -16 1708 142 0 40 chr2 112806755 112807029 -140449554 - AluJo SINE Alu -46 266 4 528 152 166 7 chr2 112807037 112807188 -140449395 + MER33 DNA MER1_type 188 362 -1 351 65 0 0 chr2 112808428 112808474 -140448109 - MADE1 DNA Mariner -32 48 3 776 214 79 101 chr2 112808727 112808753 -140447830 + L1ME LINE L1 5418 5443 -719 2367 73 7 0 chr2 112808753 112809042 -140447541 + AluY SINE Alu 1 291 -20 1918 66 112 28 chr2 112809046 112809333 -140447250 + AluY SINE Alu 1 311 0 776 214 79 101 chr2 112809333 112809556 -140447027 + L1ME LINE L1 5446 5665 -497 2395 45 0 21 chr2 112809556 112809872 -140446711 - AluY SINE Alu 0 310 1 776 214 79 101 chr2 112809872 112809971 -140446612 + L1ME LINE L1 5665 5765 -397 22 56 0 0 chr2 112810042 112810078 -140446505 + AT_rich Low_complexity Low_complexity 1 36 0 712 167 16 0 chr2 112810263 112810389 -140446194 - L1MC4 LINE L1 -1 8041 7914 2174 111 0 7 chr2 112811121 112811427 -140445156 - AluSx SINE Alu -8 304 1 2527 51 3 19 chr2 112812009 112812324 -140444259 - AluY SINE Alu -1 310 1 3185 148 39 6 chr2 112812367 112812902 -140443681 + L1MA4 LINE L1 5556 6108 -192 282 56 0 0 chr2 112813014 112813050 -140443533 + (CA)n Simple_repeat Simple_repeat 1 36 0 231 36 0 0 chr2 112813049 112813077 -140443506 + (TA)n Simple_repeat Simple_repeat 2 29 0 * 548 296 82 5 chr2 112813964 112814160 -140442423 + MIR SINE MIR 1 211 -51 217 317 67 39 chr2 112814907 112815011 -140441572 + L2 LINE L2 3080 3186 -86 1783 158 6 22 chr2 112817193 112817504 -140439079 - AluJo SINE Alu -6 306 1 223 406 65 6 chr2 112818657 112818827 -140437756 - L2 LINE L2 -212 3060 2881 250 243 27 169 chr2 112819021 112819169 -140437414 + L3 LINE CR1 1418 1544 -33 2391 77 3 3 chr2 112819539 112819839 -140436744 + AluSc SINE Alu 1 300 -9 2129 109 0 0 chr2 112820396 112820704 -140435879 + AluSx SINE Alu 1 308 0 27 29 0 0 chr2 112823818 112823852 -140432731 + AT_rich Low_complexity Low_complexity 1 34 0 201 242 306 0 chr2 112824545 112824607 -140431976 - L2 LINE L2 -21 3251 3171 2128 117 0 0 chr2 112825469 112825774 -140430809 + AluSx SINE Alu 1 305 0 1947 131 10 3 chr2 112825791 112826089 -140430494 + AluSx SINE Alu 1 300 -12 1662 185 55 9 chr2 112826096 112826421 -140430162 + MER58B DNA MER1_type 2 341 0 215 283 0 0 chr2 112826923 112826969 -140429614 - L2 LINE L2 -13 3259 3214 1558 153 20 140 chr2 112827890 112828283 -140428300 + Tigger3(Golem) DNA MER2_type 2 3027 -2 180 0 0 0 chr2 112828395 112828415 -140428168 + (T)n Simple_repeat Simple_repeat 1 20 0 766 277 33 15 chr2 112828885 112829156 -140427427 - MLT1C LTR MaLR 0 467 192 1701 74 14 0 chr2 112829543 112829759 -140426824 - AluSx SINE Alu -93 219 1 638 140 211 0 chr2 112829811 112829925 -140426658 - AluJb SINE Alu -16 296 159 188 239 0 22 chr2 112830640 112830686 -140425897 + MIR SINE MIR 109 153 -55 2132 135 3 3 chr2 112830905 112831217 -140425366 + AluJb SINE Alu 1 312 0 271 192 19 0 chr2 112832497 112832549 -140424034 + LTR47A LTR ERVL 1 53 -399 1113 241 109 35 chr2 112832580 112832957 -140423626 + LTR47B LTR ERVL 39 443 0 2076 125 3 0 chr2 112832969 112833265 -140423318 - AluSq SINE Alu -16 297 1 25 51 0 0 chr2 112834796 112834835 -140421748 + AT_rich Low_complexity Low_complexity 1 39 0 2191 121 10 0 chr2 112836143 112836448 -140420135 + AluSq SINE Alu 1 308 -5 1859 107 55 0 chr2 112836452 112836705 -140419878 + AluSg1 SINE Alu 24 290 -19 1151 226 174 58 chr2 112836950 112837570 -140419013 - LTR41 LTR ERVL -6 767 76 423 0 0 0 chr2 112838094 112838141 -140418442 + (TG)n Simple_repeat Simple_repeat 2 48 0 1748 135 60 3 chr2 112838858 112839140 -140417443 - AluJb SINE Alu -14 298 1 2147 110 3 10 chr2 112839456 112839747 -140416836 + AluSx SINE Alu 1 289 -23 2317 88 0 0 chr2 112839756 112840050 -140416533 + AluY SINE Alu 1 294 -17 210 281 78 0 chr2 112840198 112840262 -140416321 - L2 LINE L2 -208 3064 2996 255 262 92 50 chr2 112840412 112840447 -140416136 + L1ME4a LINE L1 5922 5954 -167 2265 114 0 0 chr2 112840447 112840745 -140415838 - AluSg SINE Alu -12 298 1 255 262 92 50 chr2 112840745 112840850 -140415733 + L1ME4a LINE L1 5954 6068 -53 2734 160 24 8 chr2 112841645 112842140 -140414443 - L1MA5 LINE L1 -4 6296 5794 2809 16 0 0 chr2 112843342 112843653 -140412930 - AluY SINE Alu 0 311 1 32770 97 19 65 chr2 112844201 112847689 -140408894 + L1PA7 LINE L1 12 3060 -3094 2287 41 3 54 chr2 112847689 112848015 -140408568 - AluY SINE Alu 0 311 1 32770 97 19 65 chr2 112848015 112850972 -140405611 + L1PA7 LINE L1 3060 6149 -5 2253 93 3 28 chr2 112851399 112851720 -140404863 - AluSq SINE Alu 0 313 1 225 94 0 0 chr2 112851845 112851877 -140404706 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 1461 189 165 5 chr2 112852740 112853116 -140403467 - MER21B LTR ERV1 -415 448 13 1815 229 96 19 chr2 112853116 112853743 -140402840 + L1MD2 LINE L1 5565 6275 -84 526 262 195 0 chr2 112854211 112854360 -140402223 + MIR SINE MIR 10 187 -75 2906 123 18 13 chr2 112854616 112855203 -140401380 - MER4A LTR ERV1 0 664 1 315 0 0 0 chr2 112857313 112857348 -140399235 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 1577 192 95 31 chr2 112857812 112858202 -140398381 - Charlie1 DNA MER1_type 0 2761 2347 2183 118 3 0 chr2 112859311 112859608 -140396975 - AluSq SINE Alu -7 306 9 340 254 27 45 chr2 112859868 112859978 -140396605 + MIR SINE MIR 37 144 -64 188 120 0 0 chr2 112860307 112860332 -140396251 + L2 LINE L2 3264 3288 -25 1936 153 34 0 chr2 112861423 112861718 -140394865 - AluJo SINE Alu -7 305 1 212 208 0 38 chr2 112862305 112862358 -140394225 + CT-rich Low_complexity Low_complexity 2 52 0 202 340 68 48 chr2 112862891 112862994 -140393589 - MIR SINE MIR -84 124 20 1553 150 16 28 chr2 112864104 112864357 -140392226 - AluJb SINE Alu -3 309 60 2190 117 3 0 chr2 112864739 112865048 -140391535 - AluSp SINE Alu -3 310 1 668 194 241 86 chr2 112865924 112866125 -140390458 + Charlie2a DNA MER1_type 187 356 -2506 1854 158 67 6 chr2 112866125 112866453 -140390130 - MER7A DNA MER2_type 0 346 1 668 194 241 86 chr2 112866453 112866510 -140390073 + Charlie2a DNA MER1_type 356 403 -2459 2299 110 3 0 chr2 112866510 112866818 -140389765 - AluSg SINE Alu -1 309 1 668 194 241 86 chr2 112866818 112866940 -140389643 + Charlie2a DNA MER1_type 403 627 -2235 1595 186 104 14 chr2 112866950 112867304 -140389279 - MER21B LTR ERV1 -4 859 474 933 209 0 0 chr2 112867314 112867477 -140389106 - AluJb SINE Alu -14 298 136 1769 179 13 3 chr2 112867505 112867812 -140388771 + AluJo SINE Alu 1 310 -2 2714 179 36 11 chr2 112867812 112868280 -140388303 - MER21B LTR ERV1 -383 480 1 470 236 38 0 chr2 112868341 112868447 -140388136 - MIR SINE MIR -141 121 12 877 188 94 78 chr2 112868467 112868676 -140387907 + Charlie2a DNA MER1_type 933 1137 -1725 1142 163 72 135 chr2 112868676 112869039 -140387544 + MER2 DNA MER2_type 1 340 -4 877 188 94 78 chr2 112869039 112869058 -140387525 + Charlie2a DNA MER1_type 1137 1154 -1708 4520 114 24 29 chr2 112869058 112869758 -140386825 - L1MA6 LINE L1 0 6300 5604 877 188 94 78 chr2 112869758 112869948 -140386635 + Charlie2a DNA MER1_type 1154 1362 -1500 719 210 16 0 chr2 112869948 112870072 -140386511 + FLAM_A SINE Alu 2 127 -6 877 188 94 78 chr2 112870072 112870087 -140386496 + Charlie2a DNA MER1_type 1362 1375 -1487 535 232 99 7 chr2 112870096 112870119 -140386464 + Charlie2a DNA MER1_type 1481 1500 -1362 2159 109 14 3 chr2 112870119 112870412 -140386171 + AluSx SINE Alu 1 296 -16 535 232 99 7 chr2 112870412 112870539 -140386044 + Charlie2a DNA MER1_type 1500 1645 -1217 * 1351 205 111 77 chr2 112870532 112871198 -140385385 + Charlie2a DNA MER1_type 1945 2719 -143 645 229 15 8 chr2 112871198 112871329 -140385254 + FLAM_C SINE Alu 1 132 -1 1351 205 111 77 chr2 112871329 112871415 -140385168 + Charlie2a DNA MER1_type 2719 2801 -61 2069 111 11 0 chr2 112871883 112872162 -140384421 + AluSq SINE Alu 1 282 -31 2264 69 52 0 chr2 112872892 112873183 -140383400 + AluSp SINE Alu 1 306 -7 319 259 113 85 chr2 112874125 112874372 -140382211 - L1MC4 LINE L1 0 8042 7789 1794 163 3 20 chr2 112874382 112874683 -140381900 - AluJo SINE Alu -16 296 1 2348 76 0 10 chr2 112875040 112875344 -140381239 + AluY SINE Alu 1 301 -10 2411 81 7 0 chr2 112875435 112875743 -140380840 + AluY SINE Alu 1 310 -1 1838 170 97 30 chr2 112876138 112876509 -140380074 - MSTD LTR MaLR 0 396 1 962 250 161 71 chr2 112877812 112878777 -140377806 - L1MC4 LINE L1 0 8042 6954 1197 152 181 74 chr2 112880002 112880191 -140376392 - MER2 DNA MER2_type -1 343 176 2170 116 0 7 chr2 112880191 112880492 -140376091 + AluSq SINE Alu 1 299 -14 1197 152 181 74 chr2 112880492 112880612 -140375971 - MER2 DNA MER2_type -168 176 1 1648 160 49 3 chr2 112880629 112880916 -140375667 + AluJo SINE Alu 1 300 -12 1988 142 0 52 chr2 112880937 112881083 -140375500 + AluJb SINE Alu 1 153 -159 2458 77 7 0 chr2 112881083 112881382 -140375201 + AluSc SINE Alu 1 301 -8 1988 142 0 52 chr2 112881382 112881559 -140375024 + AluJb SINE Alu 153 307 -5 1479 150 120 8 chr2 112882633 112882900 -140373683 + AluJo SINE Alu 1 297 -15 2069 97 45 7 chr2 112883225 112883514 -140373069 + AluSg SINE Alu 1 300 -10 22 0 0 0 chr2 112884184 112884206 -140372377 + AT_rich Low_complexity Low_complexity 1 22 0 1165 164 32 27 chr2 112884335 112884554 -140372029 + AluJo SINE Alu 84 303 -9 23 54 0 0 chr2 112884676 112884713 -140371870 + AT_rich Low_complexity Low_complexity 1 37 0 2221 85 24 0 chr2 112887039 112887333 -140369250 + AluY SINE Alu 1 301 -10 2517 47 0 17 chr2 112887484 112887785 -140368798 + AluY SINE Alu 1 296 -15 24 0 0 0 chr2 112888424 112888448 -140368135 + AT_rich Low_complexity Low_complexity 1 24 0 1701 124 0 0 chr2 112888462 112888687 -140367896 + AluSx SINE Alu 3 227 -85 235 105 0 26 chr2 112888694 112888732 -140367851 - Alu SINE Alu -264 37 1 1852 139 20 26 chr2 112889422 112889725 -140366858 + AluJb SINE Alu 1 301 -11 249 353 0 15 chr2 112891174 112891307 -140365276 + L1MDb LINE L1 765 895 -5514 1836 185 24 60 chr2 112891337 112891683 -140364900 - L1MB7 LINE L1 -68 6116 5788 733 142 10 178 chr2 112891683 112891880 -140364703 - FAM SINE Alu -7 168 5 1836 185 24 60 chr2 112891880 112891986 -140364597 - L1MB7 LINE L1 -396 5788 5680 911 149 0 8 chr2 112891998 112892132 -140364451 - FLAM_C SINE Alu 0 133 1 1841 207 13 30 chr2 112892164 112892623 -140363960 - L1MB7 LINE L1 -1613 4533 4083 2114 100 0 29 chr2 112892632 112892943 -140363640 - AluSg SINE Alu -8 302 1 1015 82 0 15 chr2 112893057 112893191 -140363392 + AluY SINE Alu 1 132 -179 3183 199 66 22 chr2 112893298 112893621 -140362962 + L1MB3 LINE L1 5150 5457 -726 1838 141 4 0 chr2 112893621 112893890 -140362693 + AluSx SINE Alu 11 280 -32 249 108 0 0 chr2 112893891 112893928 -140362655 + (CATA)n Simple_repeat Simple_repeat 2 38 0 3183 199 66 22 chr2 112893928 112894448 -140362135 + L1MB3 LINE L1 5456 6042 -141 252 59 0 0 chr2 112894552 112894586 -140361997 + (TG)n Simple_repeat Simple_repeat 1 34 0 288 0 0 0 chr2 112894655 112894687 -140361896 + (TG)n Simple_repeat Simple_repeat 2 33 0 923 301 205 43 chr2 112895243 112896363 -140360220 + L2 LINE L2 1008 2309 -1005 522 157 34 0 chr2 112896363 112896452 -140360131 - L1MA4 LINE L1 -88 6212 6121 351 65 0 0 chr2 112897266 112897312 -140359271 - MADE1 DNA Mariner -32 48 3 2219 62 38 10 chr2 112897591 112897881 -140358702 + AluY SINE Alu 1 298 -13 363 152 83 129 chr2 112897950 112898012 -140358571 + MER8 DNA MER2_type 1 55 -184 2115 103 13 3 chr2 112898012 112898312 -140358271 + AluSx SINE Alu 2 304 -8 363 152 83 129 chr2 112898312 112898381 -140358202 + MER8 DNA MER2_type 55 126 -113 306 102 0 0 chr2 112898500 112898549 -140358034 + AluSc SINE Alu 251 299 0 1415 230 107 19 chr2 112898604 112899034 -140357549 + L1ME1 LINE L1 5643 6110 -56 2227 107 7 3 chr2 112899034 112899334 -140357249 + AluSx SINE Alu 1 301 -11 2458 94 0 0 chr2 112899355 112899662 -140356921 + AluSc SINE Alu 1 307 -2 6417 147 33 36 chr2 112899845 112900533 -140356050 + L1M1 LINE L1 10 694 -6871 1761 176 13 13 chr2 112900533 112900840 -140355743 - AluJb SINE Alu -5 307 1 6417 147 33 36 chr2 112900840 112901280 -140355303 + L1M1 LINE L1 694 1134 -6431 14282 131 9 63 chr2 112901380 112902319 -140354264 + L1M1 LINE L1 1112 2099 -5466 1903 157 3 13 chr2 112902319 112902631 -140353952 + AluJb SINE Alu 1 309 -3 14282 131 9 63 chr2 112902631 112903253 -140353330 + L1M1 LINE L1 2099 2753 -4812 1770 126 16 4 chr2 112903253 112903507 -140353076 - AluSp SINE Alu -56 257 1 14282 131 9 63 chr2 112903507 112904119 -140352464 + L1M1 LINE L1 2753 3136 -4429 2307 78 10 0 chr2 112904119 112904412 -140352171 + AluSg SINE Alu 1 296 -14 14282 131 9 63 chr2 112904412 112904757 -140351826 + L1M1 LINE L1 3136 3498 -4067 357 93 0 0 chr2 112904758 112904812 -140351771 + (GGGA)n Simple_repeat Simple_repeat 2 55 0 1608 172 12 15 chr2 112904823 112905270 -140351313 + L1M1 LINE L1 3463 3909 -3656 363 96 0 0 chr2 112905273 112905325 -140351258 + (GGGGA)n Simple_repeat Simple_repeat 2 53 0 1272 207 12 4 chr2 112905330 112905581 -140351002 + L1M1 LINE L1 5107 5359 -2206 1014 220 5 20 chr2 112905583 112905783 -140350800 + AluJo SINE Alu 1 197 -115 6767 150 12 18 chr2 112905804 112907132 -140349451 + L1M1 LINE L1 5370 6689 -876 1224 113 0 0 chr2 112907132 112907292 -140349291 + AluSx SINE Alu 1 160 -152 1042 125 0 13 chr2 112907292 112907444 -140349139 - AluSg/x SINE Alu -46 266 117 2198 102 3 7 chr2 112907544 112907837 -140348746 - AluSc SINE Alu -17 292 1 2229 231 147 34 chr2 112907837 112908149 -140348434 - L1ME LINE L1 -986 5094 4819 1954 131 35 3 chr2 112908149 112908432 -140348151 - AluSx SINE Alu -20 292 1 2229 231 147 34 chr2 112908432 112909131 -140347452 - L1ME LINE L1 -1261 4819 3968 740 167 0 70 chr2 112909140 112909296 -140347287 - AluJo SINE Alu -162 150 6 812 169 44 0 chr2 112909347 112909530 -140347053 - L1ME LINE L1 -2133 3947 3757 2395 81 3 0 chr2 112909530 112909828 -140346755 + AluSq SINE Alu 1 299 -14 228 203 17 34 chr2 112909836 112909895 -140346688 - L1ME LINE L1 -2305 3775 3718 1335 153 16 4 chr2 112909902 112910144 -140346439 - L1MB4 LINE L1 -3 6177 5933 1993 168 0 0 chr2 112910146 112910456 -140346127 - AluSx SINE Alu -2 310 1 229 233 41 0 chr2 112910489 112910562 -140346021 - L1ME LINE L1 -2369 3711 3636 * 2018 230 56 20 chr2 112910560 112910897 -140345686 - L1ME LINE L1 -3218 2862 2539 2082 98 22 0 chr2 112910897 112911223 -140345360 - AluY SINE Alu 0 332 1 2018 230 56 20 chr2 112911223 112911504 -140345079 - L1ME LINE L1 -3541 2539 2215 2075 151 3 0 chr2 112911504 112911808 -140344775 - AluSx SINE Alu -7 305 1 2018 230 56 20 chr2 112911808 112911848 -140344735 - L1ME LINE L1 -3865 2215 2178 1631 185 3 38 chr2 112911856 112912148 -140344435 + AluJo SINE Alu 1 282 -30 25 31 0 0 chr2 112912175 112912207 -140344376 + AT_rich Low_complexity Low_complexity 1 32 0 952 250 86 17 chr2 112912207 112912344 -140344239 - L1ME LINE L1 -3896 2184 2058 2067 148 0 0 chr2 112912344 112912642 -140343941 - AluSx SINE Alu -14 298 1 952 250 86 17 chr2 112912642 112912968 -140343615 - L1ME LINE L1 -4022 2058 1689 2326 107 3 0 chr2 112912976 112913286 -140343297 - AluSp SINE Alu -2 311 1 810 197 22 67 chr2 112913324 112913719 -140342864 + L1M4 LINE L1 2561 2917 -3229 2329 77 0 55 chr2 112913719 112914046 -140342537 + AluY SINE Alu 3 311 0 556 273 134 46 chr2 112914243 112914682 -140341901 - L1MC4 LINE L1 -149 7893 7416 850 240 41 4 chr2 112914686 112914932 -140341651 - L1ME1 LINE L1 -4 6162 5908 * 953 247 97 32 chr2 112914931 112915612 -140340971 - L1ME LINE L1 -4815 1265 547 2120 114 7 0 chr2 112915643 112915932 -140340651 - AluSx SINE Alu -4 308 18 13486 27 0 0 chr2 112916011 112918370 -140338213 - L1PA2 LINE L1 0 6155 3797 282 263 48 51 chr2 112918544 112918767 -140337816 - L1ME LINE L1 -5573 497 267 773 185 86 12 chr2 112918826 112918988 -140337595 - FAM SINE Alu -1 174 1 193 305 0 51 chr2 112920689 112920748 -140335835 - L2 LINE L2 -4 3268 3213 2439 44 7 7 chr2 112920828 112921122 -140335461 + AluY SINE Alu 1 294 -17 901 221 31 0 chr2 112921886 112922081 -140334502 - MER58A DNA MER1_type 0 224 24 266 167 71 24 chr2 112922547 112922631 -140333952 + L1MCc LINE L1 1405 1492 -4931 4414 138 33 70 chr2 112922763 112922991 -140333592 - L1MA5 LINE L1 -2 6298 6063 2086 120 33 0 chr2 112922991 112923292 -140333291 - AluSx SINE Alu -1 311 1 4414 138 33 70 chr2 112923292 112924066 -140332517 - L1MA5 LINE L1 -237 6063 5333 568 216 40 85 chr2 112924172 112924243 -140332340 - MER20B DNA MER1_type -126 657 584 2230 107 7 0 chr2 112924243 112924541 -140332042 - AluSg SINE Alu -10 300 1 568 216 40 85 chr2 112924541 112924668 -140331915 - MER20B DNA MER1_type -199 584 468 835 194 25 20 chr2 112924713 112924909 -140331674 + MLT1D LTR MaLR 1 197 -308 2082 274 68 27 chr2 112924910 112925789 -140330794 + L1M3d LINE L1 4 918 -4973 391 230 0 2 chr2 112925811 112925922 -140330661 + L1MC/D LINE L1 5663 5773 -411 25 31 0 0 chr2 112925981 112926013 -140330570 + AT_rich Low_complexity Low_complexity 1 32 0 1620 195 10 13 chr2 112926170 112926332 -140330251 - AluJo SINE Alu -15 297 135 2296 81 7 0 chr2 112926332 112926628 -140329955 - AluSg SINE Alu -12 298 1 1620 195 10 13 chr2 112926628 112926763 -140329820 - AluJo SINE Alu -177 135 1 25 0 0 0 chr2 112926844 112926869 -140329714 + AT_rich Low_complexity Low_complexity 1 25 0 383 336 35 0 chr2 112927584 112927727 -140328856 + L2 LINE L2 2771 2918 -396 931 165 28 28 chr2 112928448 112928666 -140327917 - L1MA8 LINE L1 -4 6287 6070 269 59 0 0 chr2 112928666 112928700 -140327883 + Tigger4(Zombi) DNA MER2_type 3 36 -2695 264 319 0 0 chr2 112929069 112929188 -140327395 + C-rich Low_complexity Low_complexity 1 119 0 1899 194 81 11 chr2 112929455 112929914 -140326669 - L1MC2 LINE L1 -8 6336 5846 467 170 12 259 chr2 112930229 112930305 -140326278 + MER5A DNA MER1_type 1 94 -95 1957 74 4 0 chr2 112930305 112930547 -140326036 + AluSp SINE Alu 69 311 -2 2151 119 10 0 chr2 112930557 112930852 -140325731 + AluSx SINE Alu 1 298 -14 2203 105 0 0 chr2 112930852 112931136 -140325447 + AluSq SINE Alu 1 285 -28 467 170 12 259 chr2 112931136 112931294 -140325289 + MER5A DNA MER1_type 103 186 -3 2076 138 0 13 chr2 112931687 112931991 -140324592 - AluSx SINE Alu -12 300 1 2238 102 0 3 chr2 112932053 112932347 -140324236 - AluSq SINE Alu -8 305 13 2567 184 99 8 chr2 112932475 112933082 -140323501 - L1MB3 LINE L1 -8 6175 5514 7894 155 33 50 chr2 112933187 112933752 -140322831 - L1MB3 LINE L1 -1058 5088 4515 360 0 0 0 chr2 112933752 112933792 -140322791 + (TG)n Simple_repeat Simple_repeat 1 40 0 7894 155 33 50 chr2 112933792 112934100 -140322483 - L1MB3 LINE L1 -1631 4515 4203 195 69 0 0 chr2 112934100 112934129 -140322454 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 1971 135 0 4 chr2 112934129 112934410 -140322173 - AluSx SINE Alu -32 280 1 7894 155 33 50 chr2 112934410 112935403 -140321180 - L1MB3 LINE L1 -1941 4205 3252 206 134 50 17 chr2 112935403 112935511 -140321072 + CT-rich Low_complexity Low_complexity 1 111 0 1623 190 23 16 chr2 112935537 112935847 -140320736 - AluJb SINE Alu 0 312 1 364 192 26 0 chr2 112935847 112935917 -140320666 - L1MB3 LINE L1 -2881 3265 3191 1801 167 16 37 chr2 112935927 112936310 -140320273 - L1PB4 LINE L1 -5 6151 5777 491 169 70 7 chr2 112936345 112936487 -140320096 + L1M4 LINE L1 4398 4548 -1598 227 152 43 0 chr2 112936516 112936562 -140320021 + (CATATA)n Simple_repeat Simple_repeat 1 48 0 2488 74 0 7 chr2 112937275 112937585 -140318998 + AluSc SINE Alu 1 308 -1 2153 198 78 70 chr2 112937919 112938645 -140317938 - L1ME2 LINE L1 -1 6163 5432 1747 115 123 7 chr2 112938902 112939243 -140317340 - AluSx SINE Alu 0 372 1 22 0 0 0 chr2 112939248 112939270 -140317313 + AT_rich Low_complexity Low_complexity 1 22 0 2093 112 16 13 chr2 112939769 112940072 -140316511 - AluSx SINE Alu -7 305 2 2188 131 0 0 chr2 112940476 112940781 -140315802 + AluSx SINE Alu 1 305 -7 1529 122 61 82 chr2 112940782 112941011 -140315572 - MSTC LTR MaLR -106 322 101 1226 241 14 17 chr2 112941011 112941302 -140315281 - AluJo SINE Alu -20 292 3 1529 122 61 82 chr2 112941302 112941401 -140315182 - MSTC LTR MaLR -327 101 1 434 215 265 25 chr2 112941401 112941600 -140314983 + MLT1E2 LTR MaLR 72 318 -308 2223 98 7 0 chr2 112941600 112941896 -140314687 - AluSc SINE Alu -11 298 1 826 148 15 15 chr2 112941896 112942031 -140314552 - AluJo SINE Alu -177 135 1 25 0 0 0 chr2 112942112 112942137 -140314446 + AT_rich Low_complexity Low_complexity 1 25 0 383 336 35 0 chr2 112942852 112942995 -140313588 + L2 LINE L2 2771 2918 -396 931 165 28 28 chr2 112943716 112943934 -140312649 - L1MA8 LINE L1 -4 6287 6070 269 59 0 0 chr2 112943934 112943968 -140312615 + Tigger4(Zombi) DNA MER2_type 3 36 -2695 8217 197 64 55 chr2 112944233 112944568 -140312015 + L1P4 LINE L1 2665 2996 -3170 347 53 0 19 chr2 112944568 112944628 -140311955 + Alu SINE Alu 1 52 -251 2517 81 0 0 chr2 112944632 112944940 -140311643 + AluSx SINE Alu 1 308 -4 8217 197 64 55 chr2 112944940 112947333 -140309250 + L1P4 LINE L1 2998 5478 -688 1268 123 171 0 chr2 112947435 112947663 -140308920 - AluSx SINE Alu -45 267 1 22 0 0 0 chr2 112947668 112947690 -140308893 + AT_rich Low_complexity Low_complexity 1 22 0 2093 112 16 13 chr2 112948189 112948492 -140308091 - AluSx SINE Alu -7 305 2 2160 134 0 0 chr2 112948896 112949201 -140307382 + AluSx SINE Alu 1 305 -7 1529 122 61 82 chr2 112949202 112949431 -140307152 - MSTC LTR MaLR -106 322 101 1226 241 14 17 chr2 112949431 112949722 -140306861 - AluJo SINE Alu -20 292 3 1529 122 61 82 chr2 112949722 112949821 -140306762 - MSTC LTR MaLR -327 101 1 1211 232 162 38 chr2 112949821 112950022 -140306561 + MLT1E2 LTR MaLR 72 247 -379 2364 94 0 0 chr2 112950022 112950320 -140306263 - AluSc SINE Alu -11 298 1 1211 232 162 38 chr2 112950320 112950612 -140305971 + MLT1E2 LTR MaLR 247 626 0 1889 165 0 3 chr2 112950753 112951044 -140305539 + AluJb SINE Alu 1 290 -22 328 176 47 0 chr2 112951702 112951787 -140304796 + Cheshire DNA MER1_type 1079 1167 -1253 331 356 29 41 chr2 112951798 112952211 -140304372 + L1M3d LINE L1 241 648 -5483 792 253 89 47 chr2 112952384 112952855 -140303728 + L1M3d LINE L1 932 1422 -4719 807 154 0 29 chr2 112952855 112952991 -140303592 + AluJb SINE Alu 1 132 -180 3267 224 134 34 chr2 112952996 112953804 -140302779 + L1M4 LINE L1 1161 1887 -4495 2221 121 0 0 chr2 112953804 112954094 -140302489 + AluSx SINE Alu 1 290 -22 3267 224 134 34 chr2 112954094 112954391 -140302192 + L1M4 LINE L1 1887 2153 -4229 2055 120 60 0 chr2 112954391 112954674 -140301909 + AluSq SINE Alu 1 300 -13 3267 224 134 34 chr2 112954674 112956143 -140300440 + L1M4 LINE L1 2153 4006 -2376 5542 138 23 39 chr2 112956143 112956427 -140300156 - Tigger3b DNA MER2_type -1797 1231 944 2187 93 21 0 chr2 112956427 112956716 -140299867 + AluSx SINE Alu 1 295 -17 5542 138 23 39 chr2 112956716 112957665 -140298918 - Tigger3b DNA MER2_type -2084 944 1 312 329 61 31 chr2 112957753 112957981 -140298602 + L1MC4 LINE L1 7437 7671 -371 180 0 0 0 chr2 112958003 112958023 -140298560 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 4071 215 58 20 chr2 112958024 112959801 -140296782 - L1MB8 LINE L1 -5 6173 4321 2404 78 0 7 chr2 112960263 112960570 -140296013 + AluY SINE Alu 1 305 -6 355 273 117 36 chr2 112960661 112960910 -140295673 + L1M4 LINE L1 4983 5251 -1131 2683 202 53 34 chr2 112961080 112961425 -140295158 + L1M3 LINE L1 4635 4972 -1208 2129 126 0 3 chr2 112961425 112961719 -140294864 + AluSg SINE Alu 1 293 -17 2683 202 53 34 chr2 112961719 112962196 -140294387 + L1M3 LINE L1 4972 5481 -699 1125 199 16 19 chr2 112962203 112962459 -140294124 + AluSx SINE Alu 11 265 -47 284 226 43 11 chr2 112962777 112962870 -140293713 + MER20B DNA MER1_type 683 778 -5 255 340 10 29 chr2 112962909 112963012 -140293571 - MIR SINE MIR -66 142 42 183 299 75 0 chr2 112963291 112963358 -140293225 + L2 LINE L2 2951 3022 -250 234 294 82 55 chr2 112964604 112964750 -140291833 + MLT1J LTR MaLR 343 492 -19 419 290 37 53 chr2 112964875 112965120 -140291463 + L1M3e LINE L1 -722 4294966814 -6788 1956 243 47 34 chr2 112965581 112966387 -140290196 + L1M3e LINE L1 927 1797 -4516 1847 150 97 21 chr2 112966388 112966769 -140289814 + L1MB3 LINE L1 5774 6183 0 485 246 54 42 chr2 112966809 112966976 -140289607 - HAL1b LINE L1 -82 1266 1098 1823 139 3 65 chr2 112967028 112967338 -140289245 + AluSx SINE Alu 1 291 -21 305 77 19 0 chr2 112967397 112967449 -140289134 - L1MB4 LINE L1 -1 6179 6127 701 260 79 75 chr2 112967482 112967990 -140288593 - HAL1b LINE L1 -447 901 392 472 146 18 0 chr2 112968024 112968120 -140288463 - MLT-int LTR MaLR 0 1720 1554 918 218 58 2 chr2 112968273 112968586 -140287997 - MSTD LTR MaLR -3 393 1 446 211 89 8 chr2 112968586 112968709 -140287874 - MSTD-int LTR MaLR 0 1735 1603 1595 101 60 0 chr2 112969425 112969642 -140286941 + MER30 DNA MER1_type 1 230 0 217 340 75 19 chr2 112969699 112969805 -140286778 - MIR SINE MIR -65 143 32 203 237 0 26 chr2 112970967 112971030 -140285553 + GA-rich Low_complexity Low_complexity 3 65 -11 642 13 0 0 chr2 112971030 112971107 -140285476 + L1PA2 LINE L1 6079 6155 0 203 237 0 26 chr2 112971107 112971119 -140285464 + GA-rich Low_complexity Low_complexity 65 76 0 1903 166 3 3 chr2 112971350 112971645 -140284938 + AluJb SINE Alu 1 295 -17 2150 119 10 0 chr2 112972960 112973270 -140283313 + AluSq SINE Alu 1 313 0 445 314 143 35 chr2 112973441 112973894 -140282689 + HAL1b LINE L1 153 654 -694 802 216 0 0 chr2 112974920 112975045 -140281538 - FLAM_C SINE Alu -17 126 2 294 248 80 40 chr2 112975385 112975510 -140281073 - MIR SINE MIR -35 227 98 247 192 170 16 chr2 112975833 112976015 -140280568 + L1M4 LINE L1 3096 3305 -2841 572 180 0 9 chr2 112976065 112976176 -140280407 + L1M4 LINE L1 4513 4622 -1524 323 194 75 0 chr2 112976186 112976253 -140280330 - Tigger1 DNA MER2_type -811 1607 1536 * 2772 113 27 36 chr2 112976242 112976685 -140279898 + Tigger1 DNA MER2_type 1017 1455 -963 1162 118 6 0 chr2 112976706 112976876 -140279707 + Tigger1 DNA MER2_type 1584 1754 -664 * 6224 111 56 22 chr2 112976871 112977636 -140278947 - Tigger1 DNA MER2_type -1400 1018 211 1985 134 0 32 chr2 112977636 112977949 -140278634 + AluJo SINE Alu 1 303 -9 6224 111 56 22 chr2 112977949 112978168 -140278415 - Tigger1 DNA MER2_type -2207 211 1 309 279 106 0 chr2 112979556 112979660 -140276923 + LTR33 LTR ERVL 403 517 -4 1544 184 54 0 chr2 112979700 112979977 -140276606 - AluJo SINE Alu -20 292 1 209 263 0 18 chr2 112979982 112980039 -140276544 + MIR SINE MIR 85 140 -68 14189 189 40 26 chr2 112981321 112982191 -140274392 - L1MA4A LINE L1 -23 6979 6123 2221 92 7 0 chr2 112982191 112982486 -140274097 - AluY SINE Alu -14 297 1 14189 189 40 26 chr2 112982486 112986002 -140270581 - L1MA4A LINE L1 -879 6123 2396 1558 186 13 28 chr2 112986002 112986319 -140270264 - AluJb SINE Alu 0 312 1 14189 189 40 26 chr2 112986319 112988738 -140267845 - L1MA4A LINE L1 -4606 2396 13 2411 221 60 19 chr2 112988738 112989326 -140267257 + MER65A-int LTR ERV1 4260 4871 0 2607 136 15 42 chr2 112989326 112989783 -140266800 + MER65A LTR ERV1 1 445 0 400 212 0 117 chr2 112989847 112989984 -140266599 + MLT1H LTR MaLR 429 549 0 22 35 0 0 chr2 112990267 112990296 -140266287 + AT_rich Low_complexity Low_complexity 1 29 0 211 217 225 8 chr2 112991450 112991579 -140265004 - MIR3 SINE MIR -40 168 12 214 260 82 14 chr2 112992280 112992353 -140264230 + L2 LINE L2 3174 3251 -62 44 35 0 0 chr2 112993066 112993124 -140263459 + AT_rich Low_complexity Low_complexity 1 58 0 211 217 22 0 chr2 112993494 112993540 -140263043 + MER5B DNA MER1_type 4 50 -128 8868 201 85 44 chr2 112993540 112995479 -140261104 + L1MD1 LINE L1 9 1868 -4768 2135 118 0 0 chr2 112995479 112995766 -140260817 + AluSx SINE Alu 1 287 -25 8868 201 85 44 chr2 112995766 112996049 -140260534 + L1MD1 LINE L1 1868 2138 -4498 2119 121 23 3 chr2 112996049 112996356 -140260227 + AluSq SINE Alu 1 313 0 8868 201 85 44 chr2 112996356 112997597 -140258986 + L1MD1 LINE L1 2138 3327 -3309 1965 128 3 21 chr2 112997597 112997733 -140258850 + AluSx SINE Alu 1 138 -169 1883 101 112 0 chr2 112997733 112998001 -140258582 + AluSg SINE Alu 1 298 -12 1965 128 3 21 chr2 112998001 112998176 -140258407 + AluSx SINE Alu 138 307 0 8868 201 85 44 chr2 112998176 113000823 -140255760 + L1MD1 LINE L1 3327 6635 -1 185 288 25 76 chr2 113000852 113000970 -140255613 + MER5B DNA MER1_type 59 170 -8 2057 129 3 13 chr2 113003139 113003441 -140253142 + AluSx SINE Alu 1 299 -13 184 317 0 0 chr2 113004093 113004134 -140252449 + L2 LINE L2 3224 3264 -8 383 261 52 15 chr2 113005651 113005785 -140250798 + MIR SINE MIR 46 184 -78 207 214 0 0 chr2 113006775 113006817 -140249766 + (ATG)n Simple_repeat Simple_repeat 1 42 0 2387 87 0 7 chr2 113008733 113009043 -140247540 - AluY SINE Alu -3 308 1 349 128 0 11 chr2 113009300 113009369 -140247214 + AluY SINE Alu 1 44 -258 2142 72 0 4 chr2 113009500 113009762 -140246821 + AluY SINE Alu 39 299 -12 2336 119 3 0 chr2 113009773 113010085 -140246498 + AluSq SINE Alu 1 313 0 1624 143 57 39 chr2 113010709 113010989 -140245594 - AluSx SINE Alu -14 298 14 2347 94 10 0 chr2 113011418 113011726 -140244857 + AluSq SINE Alu 3 313 0 1510 172 114 3 chr2 113013023 113013355 -140243228 + L1MA5 LINE L1 5926 6294 -6 252 213 33 0 chr2 113014785 113014846 -140241737 + MER5A DNA MER1_type 44 106 -83 2196 106 3 0 chr2 113015154 113015456 -140241127 - AluSp SINE Alu 0 303 1 194 281 125 0 chr2 113016002 113016098 -140240485 - MIR SINE MIR -33 229 122 342 206 130 0 chr2 113016792 113016884 -140239699 + MER5A DNA MER1_type 53 156 -33 409 246 88 41 chr2 113018808 113018979 -140237604 - MIR SINE MIR -51 211 33 214 280 121 61 chr2 113020929 113021061 -140235522 + L2 LINE L2 3133 3272 0 1982 150 14 0 chr2 113021421 113021715 -140234868 - AluSx SINE Alu -14 298 1 180 326 61 10 chr2 113021795 113021893 -140234690 - L3b LINE CR1 -132 1451 1349 216 267 17 17 chr2 113023169 113023229 -140233354 - L3 LINE CR1 -96 1481 1422 206 368 0 0 chr2 113024215 113024329 -140232254 + (CCA)n Simple_repeat Simple_repeat 3 116 0 369 279 0 29 chr2 113026604 113026708 -140229875 - MIR SINE MIR -49 213 113 405 235 18 21 chr2 113027333 113027479 -140229104 - MIR3 SINE MIR -52 156 11 2653 58 0 3 chr2 113028046 113028356 -140228227 + AluY SINE Alu 1 309 -2 266 159 0 0 chr2 113028571 113028615 -140227968 - MSTD LTR MaLR -352 44 1 1554 181 89 19 chr2 113030307 113030677 -140225906 - MSTD LTR MaLR 0 396 1 320 222 14 0 chr2 113030871 113030943 -140225640 + MER58B DNA MER1_type 269 341 0 660 169 169 6 chr2 113031116 113031276 -140225307 + MER5A DNA MER1_type 4 189 0 329 252 107 0 chr2 113031507 113031610 -140224973 - L2 LINE L2 0 3313 3200 402 236 100 27 chr2 113032668 113032778 -140223805 + MER45A DNA AcHobo 61 178 0 388 249 12 0 chr2 113033216 113033381 -140223202 + (TG)n Simple_repeat Simple_repeat 2 168 0 659 204 0 6 chr2 113033400 113033581 -140223002 + (TG)n Simple_repeat Simple_repeat 1 180 0 2142 99 15 0 chr2 113034605 113034877 -140221706 - AluSg SINE Alu -34 276 1 1707 113 0 36 chr2 113034977 113035225 -140221358 - AluSx SINE Alu -12 300 62 577 294 137 11 chr2 113036679 113037036 -140219547 - L1ME2 LINE L1 -9 6155 5754 294 265 45 18 chr2 113037971 113038121 -140218462 - MIR SINE MIR -60 148 35 2316 102 0 0 chr2 113039920 113040213 -140216370 - AluSx SINE Alu -19 293 1 1473 145 1 0 chr2 113041456 113041700 -140214883 + L1MB3 LINE L1 5741 5986 -197 1551 164 72 36 chr2 113042307 113042667 -140213916 - THE1C LTR MaLR 0 375 3 9492 118 37 38 chr2 113042667 113044244 -140212339 - THE1C-int LTR MaLR 0 1580 4 1699 155 49 38 chr2 113044247 113044614 -140211969 - THE1C LTR MaLR 0 375 5 731 183 0 7 chr2 113044636 113044773 -140211810 + AluJo SINE Alu 2 137 -175 1720 168 0 17 chr2 113044790 113045081 -140211502 - AluJb SINE Alu -26 286 1 188 151 38 113 chr2 113045652 113045705 -140210878 + L3b LINE CR1 1527 1575 -8 461 84 14 0 chr2 113045984 113046055 -140210528 + (TCCC)n Simple_repeat Simple_repeat 2 73 0 559 244 85 0 chr2 113046056 113046220 -140210363 - FRAM SINE Alu -4 172 1 523 246 99 38 chr2 113046625 113046836 -140209747 - LTR16A LTR ERVL -194 256 33 372 244 43 26 chr2 113047435 113047550 -140209033 + MIR3 SINE MIR 85 201 -7 767 278 100 57 chr2 113048221 113048794 -140207789 - L1MEc LINE L1 -5076 1142 523 1095 101 0 0 chr2 113048794 113048953 -140207630 - L1MA2 LINE L1 -1 6303 6145 767 278 100 57 chr2 113048953 113049412 -140207171 - L1MEc LINE L1 -5695 523 85 2270 98 0 26 chr2 113050478 113050783 -140205800 - AluSx SINE Alu -15 297 1 1973 78 4 0 chr2 113050793 113051035 -140205548 - AluSp SINE Alu -2 311 69 390 200 0 0 chr2 113051036 113051111 -140205472 - MER5A DNA MER1_type -114 75 1 2007 199 81 11 chr2 113051404 113051885 -140204698 + L1MC2 LINE L1 5817 6336 -8 4760 184 73 19 chr2 113052019 113052183 -140204400 - Cheshire DNA MER1_type 0 2420 2266 2519 47 0 60 chr2 113052183 113052502 -140204081 - AluY SINE Alu -11 300 1 4760 184 73 19 chr2 113052502 113052671 -140203912 - Cheshire DNA MER1_type -154 2266 2108 2239 103 10 17 chr2 113052671 113052971 -140203612 - AluSx SINE Alu -14 298 1 4760 184 73 19 chr2 113052971 113053039 -140203544 - Cheshire DNA MER1_type -312 2108 2045 1294 184 15 4 chr2 113053039 113053306 -140203277 - L1MB4 LINE L1 -2 6178 5909 4760 184 73 19 chr2 113053306 113054090 -140202493 - Cheshire DNA MER1_type -375 2045 1168 520 179 93 0 chr2 113054092 113054232 -140202351 - L1MB2 LINE L1 0 6171 6019 1304 226 94 28 chr2 113054235 113054598 -140201985 - MSTD LTR MaLR -8 388 2 2412 178 22 2 chr2 113054599 113055049 -140201534 - L1MB2 LINE L1 -147 6024 5566 3269 215 45 10 chr2 113055055 113055875 -140200708 - L1MB2 LINE L1 -1530 4616 3768 1387 149 56 126 chr2 113055876 113056218 -140200365 + Tigger3(Golem) DNA MER2_type 3 320 -2709 1129 243 76 43 chr2 113056400 113056795 -140199788 - MER74B LTR ERVL -149 473 66 246 262 66 49 chr2 113056847 113056995 -140199588 - L1MB4 LINE L1 -391 5779 5630 322 296 162 17 chr2 113057180 113057359 -140199224 - L1ME4a LINE L1 -123 6392 6188 3366 242 70 26 chr2 113057887 113059251 -140197332 - L1ME4a LINE L1 -1538 5002 3573 1805 139 78 17 chr2 113059253 113059446 -140197137 - AluSq SINE Alu -1 312 93 308 43 22 0 chr2 113059446 113059492 -140197091 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 1805 139 78 17 chr2 113059492 113059592 -140196991 - AluSq SINE Alu -220 93 1 1297 188 85 48 chr2 113059679 113060399 -140196184 - L1MDa LINE L1 -3457 3083 2333 1679 150 7 43 chr2 113060474 113060795 -140195788 - AluJo SINE Alu 0 312 1 1993 228 57 28 chr2 113060795 113061300 -140195283 + MER54A LTR ERVL 174 901 0 4208 167 148 48 chr2 113061300 113061616 -140194967 - L1MDa LINE L1 -4203 2337 2054 2178 124 0 0 chr2 113061616 113061914 -140194669 - AluSx SINE Alu -14 298 1 4208 167 148 48 chr2 113061914 113062301 -140194282 - L1MDa LINE L1 -4486 2054 1707 315 0 0 0 chr2 113062301 113062336 -140194247 + (TG)n Simple_repeat Simple_repeat 2 36 0 1561 161 108 0 chr2 113062336 113062615 -140193968 - AluJo SINE Alu -1 311 3 4208 167 148 48 chr2 113062615 113063088 -140193495 - L1MDa LINE L1 -4832 1708 1041 2290 101 3 0 chr2 113063205 113063501 -140193082 - AluSg SINE Alu -13 297 1 2511 70 0 0 chr2 113064027 113064326 -140192257 - AluY SINE Alu -12 299 1 21 57 0 0 chr2 113064813 113064848 -140191735 + AT_rich Low_complexity Low_complexity 1 35 0 1924 138 14 14 chr2 113064854 113065145 -140191438 + AluJo SINE Alu 1 291 -21 981 180 50 10 chr2 113065706 113065906 -140190677 + MER58A DNA MER1_type 6 213 -11 1160 252 77 20 chr2 113067374 113067815 -140188768 + L1MEc LINE L1 892 1357 -5039 221 0 35 0 chr2 113068898 113068927 -140187656 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2223 89 0 4 chr2 113068929 113069210 -140187373 - AluSg SINE Alu -30 280 1 2930 144 72 50 chr2 113069237 113069751 -140186832 - MER21A LTR ERV1 0 931 403 2293 103 3 3 chr2 113069751 113070061 -140186522 - AluSq SINE Alu -3 310 1 2930 144 72 50 chr2 113070061 113070088 -140186495 - MER21A LTR ERV1 -528 403 378 1008 132 236 9 chr2 113070099 113070311 -140186272 - MER21A LTR ERV1 -671 260 1 546 234 62 0 chr2 113070514 113070659 -140185924 - MIR SINE MIR -6 256 103 4588 89 20 3 chr2 113070726 113071367 -140185216 + L1PA13 LINE L1 5508 6159 -4 271 258 83 30 chr2 113071624 113071756 -140184827 - MIR SINE MIR -6 256 118 1626 199 14 7 chr2 113071982 113072279 -140184304 - AluJo SINE Alu -13 299 1 539 56 90 14 chr2 113072298 113072587 -140183996 + (TA)n Simple_repeat Simple_repeat 1 311 0 264 297 88 0 chr2 113072754 113072845 -140183738 + MIR SINE MIR 2 100 -162 578 218 14 21 chr2 113073030 113073172 -140183411 - MLT1H LTR MaLR -3 546 406 541 243 50 16 chr2 113073229 113073390 -140183193 - MLT1H LTR MaLR -347 202 1 2276 90 27 0 chr2 113075525 113075824 -140180759 - AluSc SINE Alu 0 309 3 2304 114 0 0 chr2 113076519 113076827 -140179756 + AluSx SINE Alu 1 308 -4 8767 189 70 33 chr2 113077154 113079929 -140176654 - L1PA16 LINE L1 0 6166 2996 2093 134 3 10 chr2 113079930 113080236 -140176347 - AluSx SINE Alu -4 308 5 2366 94 3 0 chr2 113080247 113080546 -140176037 - AluSp SINE Alu -13 300 1 280 194 14 14 chr2 113080548 113080620 -140175963 + L1M2 LINE L1 2796 2867 -3982 2094 41 0 4 chr2 113080678 113080924 -140175659 - AluY SINE Alu -65 246 2 2475 172 25 45 chr2 113080925 113081328 -140175255 + L1MB2 LINE L1 5661 6070 -101 1482 202 13 7 chr2 113081328 113081630 -140174953 + AluJo SINE Alu 9 312 0 2475 172 25 45 chr2 113081630 113081705 -140174878 + L1MB2 LINE L1 6070 6131 -40 2236 101 7 0 chr2 113081705 113082001 -140174582 + AluSp SINE Alu 1 298 -15 2475 172 25 45 chr2 113082001 113082038 -140174545 + L1MB2 LINE L1 6131 6167 -4 230 167 0 0 chr2 113082057 113082105 -140174478 + L1M2 LINE L1 3872 3919 -2929 1263 57 6 23 chr2 113082107 113082283 -140174300 - AluY SINE Alu -19 292 120 400 236 100 27 chr2 113083137 113083247 -140173336 + MER45A DNA AcHobo 61 178 0 388 249 12 0 chr2 113083685 113083850 -140172733 + (TG)n Simple_repeat Simple_repeat 2 168 0 683 200 0 6 chr2 113083869 113084049 -140172534 + (TG)n Simple_repeat Simple_repeat 2 180 0 2122 99 15 0 chr2 113085072 113085344 -140171239 - AluSg SINE Alu -34 276 1 1670 113 0 36 chr2 113085444 113085692 -140170891 - AluSx SINE Alu -12 300 62 569 266 157 31 chr2 113087146 113087503 -140169080 - L1ME2 LINE L1 -9 6155 5754 250 265 45 18 chr2 113088438 113088588 -140167995 - MIR SINE MIR -60 148 35 2296 99 0 0 chr2 113090386 113090679 -140165904 - AluSx SINE Alu -19 293 1 1531 145 1 0 chr2 113091922 113092166 -140164417 + L1MB3 LINE L1 5741 5986 -197 1686 162 72 36 chr2 113092773 113093132 -140163451 - THE1C LTR MaLR 0 375 4 9978 114 37 39 chr2 113093132 113094711 -140161872 - THE1C-int LTR MaLR 0 1580 4 1708 172 55 28 chr2 113094714 113095075 -140161508 - THE1C LTR MaLR 0 375 5 762 183 0 7 chr2 113095097 113095234 -140161349 + AluJo SINE Alu 2 137 -175 1688 168 0 17 chr2 113095251 113095542 -140161041 - AluJb SINE Alu -26 286 1 180 151 38 113 chr2 113096113 113096166 -140160417 + L3b LINE CR1 1527 1575 -8 357 125 14 14 chr2 113096447 113096519 -140160064 + CT-rich Low_complexity Low_complexity 2 73 0 590 244 85 0 chr2 113096520 113096684 -140159899 - FRAM SINE Alu -4 172 1 523 223 104 43 chr2 113097089 113097300 -140159283 - LTR16A LTR ERVL -194 256 33 343 245 51 10 chr2 113097899 113097997 -140158586 + MIR3 SINE MIR 85 186 -22 790 250 100 50 chr2 113098708 113099128 -140157455 - L1MEc LINE L1 -5254 1142 702 1165 101 0 0 chr2 113099258 113099417 -140157166 - L1MA2 LINE L1 -1 6303 6145 341 320 124 29 chr2 113099570 113099876 -140156707 - L1MEc LINE L1 -5977 419 85 2269 95 0 26 chr2 113100943 113101248 -140155335 - AluSx SINE Alu -15 297 1 616 260 22 40 chr2 113101340 113101563 -140155020 + MIR SINE MIR 2 220 -42 1564 118 165 0 chr2 113101730 113101984 -140154599 + AluSx SINE Alu 1 296 -6 2340 88 0 10 chr2 113102013 113102319 -140154264 + AluY SINE Alu 5 307 -4 491 275 12 6 chr2 113102364 113102531 -140154052 - L1ME4a LINE L1 -267 5854 5687 2344 92 0 7 chr2 113103049 113103355 -140153228 - AluSp SINE Alu -9 304 1 261 219 41 14 chr2 113106000 113106073 -140150510 - MER52-int LTR ERV1 -5442 1649 1575 883 246 188 19 chr2 113106902 113107333 -140149250 - L1ME4a LINE L1 -3 6118 5615 302 329 7 21 chr2 113108517 113108660 -140147923 - MIR SINE MIR -51 211 71 2558 52 0 7 chr2 113108679 113108984 -140147599 + AluY SINE Alu 1 303 -8 646 221 39 50 chr2 113109715 113109896 -140146687 - L1MD1 LINE L1 -5 6237 6059 553 235 74 0 chr2 113110282 113110431 -140146152 + MER3 DNA MER1_type 50 209 0 230 272 56 64 chr2 113110515 113110640 -140145943 - MIR SINE MIR -68 140 17 183 42 0 0 chr2 113111390 113111414 -140145169 + (TG)n Simple_repeat Simple_repeat 1 24 0 2299 65 54 14 chr2 113111482 113111776 -140144807 + AluY SINE Alu 1 306 -5 2107 145 0 0 chr2 113113225 113113522 -140143061 - AluSx SINE Alu -15 297 1 231 348 56 0 chr2 113114372 113114461 -140142122 - MIR SINE MIR -48 214 121 497 198 31 0 chr2 113114465 113114561 -140142022 + MER5A DNA MER1_type 7 105 -84 643 282 7 18 chr2 113115107 113115410 -140141173 + LTR37B LTR ERV1 114 457 -11 262 254 0 14 chr2 113116441 113116512 -140140071 + MER5A DNA MER1_type 40 109 -80 192 238 71 0 chr2 113116498 113116540 -140140043 - MER5A DNA MER1_type -104 85 41 * 414 269 193 0 chr2 113117573 113117718 -140138865 + MER5A DNA MER1_type 10 182 -7 215 250 0 0 chr2 113117736 113117784 -140138799 - MER5B DNA MER1_type -4 174 127 * 235 200 107 53 chr2 113117760 113117835 -140138748 + MER5B DNA MER1_type 92 170 -8 504 266 92 23 chr2 113117877 113118020 -140138563 - MIR3 SINE MIR -15 193 35 1534 203 174 16 chr2 113118020 113118509 -140138074 + MLT1F1 LTR MaLR 1 566 -1 504 266 92 23 chr2 113118509 113118538 -140138045 - MIR3 SINE MIR -173 35 9 2095 129 0 19 chr2 113119257 113119575 -140137008 - AluSq SINE Alu -1 312 1 2586 65 0 3 chr2 113120335 113120645 -140135938 + AluY SINE Alu 1 309 -2 323 320 96 34 chr2 113120652 113120736 -140135847 - MIR SINE MIR -16 246 169 2309 100 0 0 chr2 113120736 113121027 -140135556 + AluSg SINE Alu 1 291 -19 323 320 96 34 chr2 113121027 113121120 -140135463 - MIR SINE MIR -93 169 58 249 257 147 9 chr2 113121594 113121703 -140134880 - LTR33 LTR ERVL -364 157 34 4709 192 36 22 chr2 113122212 113123255 -140133328 - L1MC3 LINE L1 -16 7769 6712 2526 44 0 7 chr2 113123560 113123856 -140132727 - AluY SINE Alu -17 294 1 24 67 0 0 chr2 113124883 113124928 -140131655 + AT_rich Low_complexity Low_complexity 1 45 0 402 57 0 0 chr2 113125709 113125762 -140130821 + (TC)n Simple_repeat Simple_repeat 2 54 0 249 33 0 0 chr2 113125762 113125792 -140130791 + (CA)n Simple_repeat Simple_repeat 1 30 0 249 57 0 0 chr2 113126380 113126415 -140130168 + (GGGTG)n Simple_repeat Simple_repeat 3 37 0 256 180 30 20 chr2 113126753 113126853 -140129730 + (TA)n Simple_repeat Simple_repeat 1 101 0 505 273 52 13 chr2 113126900 113127054 -140129529 - L2 LINE L2 -227 3086 2927 189 307 116 71 chr2 113127339 113127564 -140129019 - MIR SINE MIR -19 243 9 211 302 0 0 chr2 113128076 113128129 -140128454 + MIR SINE MIR 88 140 -68 400 259 95 35 chr2 113128224 113128340 -140128243 - L2 LINE L2 -16 3256 3134 181 278 41 41 chr2 113129600 113129697 -140126886 - MIR3 SINE MIR -31 177 81 568 297 158 39 chr2 113130854 113131164 -140125419 + L2 LINE L2 2967 3313 0 180 0 0 0 chr2 113132154 113132174 -140124409 + (TTCA)n Simple_repeat Simple_repeat 3 22 0 374 233 0 0 chr2 113132881 113132954 -140123629 + MIR SINE MIR 74 146 -116 1711 106 84 51 chr2 113136308 113136441 -140120142 + AluSx SINE Alu 3 130 -178 2953 10 0 0 chr2 113136441 113136753 -140119830 + AluYb8 SINE Alu 1 312 -6 1711 106 84 51 chr2 113136753 113136916 -140119667 + AluSx SINE Alu 130 308 0 2051 128 24 0 chr2 113138096 113138385 -140118198 - AluSx SINE Alu -7 305 10 440 315 23 0 chr2 113138503 113138633 -140117950 - L2 LINE L2 -1 3312 3180 1568 141 150 34 chr2 113140091 113140418 -140116165 - MLT1A1 LTR MaLR 0 365 1 225 0 0 0 chr2 113141090 113141115 -140115468 + (TA)n Simple_repeat Simple_repeat 2 26 0 2633 47 0 3 chr2 113141116 113141416 -140115167 - AluY SINE Alu -12 299 1 786 227 0 0 chr2 113141455 113141596 -140114987 - FRAM SINE Alu -20 156 16 314 297 38 54 chr2 113141921 113142106 -140114477 + MLT1J LTR MaLR 99 280 -231 594 256 86 27 chr2 113143001 113143363 -140113220 - MLT1J2 LTR MaLR -25 425 6 2556 81 0 0 chr2 113143446 113143756 -140112827 + AluY SINE Alu 1 310 -1 2284 104 0 3 chr2 113143902 113144211 -140112372 + AluSg SINE Alu 1 308 -2 365 301 42 35 chr2 113144377 113144520 -140112063 + L2 LINE L2 1859 2002 -1312 244 233 172 52 chr2 113145048 113145164 -140111419 - Charlie8 DNA MER1_type -2286 131 2 554 275 0 14 chr2 113145459 113145601 -140110982 + MIR SINE MIR 97 236 -26 2077 134 3 31 chr2 113146536 113146857 -140109726 + AluJo SINE Alu 1 312 0 683 258 93 5 chr2 113146992 113147186 -140109397 - MIR SINE MIR 0 262 52 2286 67 11 3 chr2 113148003 113148321 -140108262 - AluY SINE Alu 0 320 1 208 283 128 94 chr2 113148646 113148943 -140107640 + L2 LINE L2 2573 2879 -435 3400 151 27 59 chr2 113149165 113149517 -140107066 - MER4D LTR ERV1 -179 724 407 2498 82 0 3 chr2 113149517 113149823 -140106760 - AluY SINE Alu -1 310 6 3400 151 27 59 chr2 113149823 113150217 -140106366 - MER4D LTR ERV1 -496 407 2 2448 54 3 7 chr2 113150225 113150522 -140106061 - AluY SINE Alu -15 296 1 415 311 33 0 chr2 113150579 113150701 -140105882 - MIR SINE MIR -16 246 121 3478 156 3 10 chr2 113150709 113151287 -140105296 + MER50 LTR ERV1 1 574 -160 2368 105 0 7 chr2 113151288 113151594 -140104989 - AluSg SINE Alu -6 304 1 2060 94 59 14 chr2 113151594 113151880 -140104703 - AluSx SINE Alu -13 299 1 2139 87 13 61 chr2 113152395 113152572 -140104011 - AluSc SINE Alu -12 297 140 2365 73 0 0 chr2 113152572 113152860 -140103723 - AluY SINE Alu -23 288 1 2139 87 13 61 chr2 113152860 113152992 -140103591 - AluSc SINE Alu -169 140 3 331 325 25 0 chr2 113153091 113153211 -140103372 - MLT2F LTR ERVL -2 661 539 427 198 48 48 chr2 113153241 113153367 -140103216 - MLT2E LTR ERVL -499 129 3 473 98 0 0 chr2 113153559 113153620 -140102963 - Alu SINE Alu -256 62 2 1846 176 3 10 chr2 113154130 113154437 -140102146 + AluJo SINE Alu 1 305 -7 1145 191 85 4 chr2 113154448 113154694 -140101889 - LOR1b LTR ERV1 -195 266 1 22 35 0 0 chr2 113154785 113154814 -140101769 + AT_rich Low_complexity Low_complexity 1 29 0 311 299 121 25 chr2 113154849 113155006 -140101577 + HAL1 LINE L1 1187 1358 -1149 423 0 0 0 chr2 113155117 113155164 -140101419 + (CA)n Simple_repeat Simple_repeat 1 47 0 27 29 0 0 chr2 113155569 113155603 -140100980 + AT_rich Low_complexity Low_complexity 1 34 0 380 111 28 14 chr2 113155769 113155841 -140100742 - MER96B DNA MER1_type? -236 181 109 1171 157 5 26 chr2 113155843 113156034 -140100549 + AluJo SINE Alu 96 282 -30 227 0 0 83 chr2 113156039 113156075 -140100508 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 1068 90 0 7 chr2 113156260 113156404 -140100179 + LTR8 LTR ERV1 547 689 -2 15328 126 33 45 chr2 113156407 113159352 -140097231 + HUERS-P1 LTR ERV1 1 2734 -3212 2040 153 0 0 chr2 113159352 113159665 -140096918 + AluSq SINE Alu 1 313 0 15328 126 33 45 chr2 113159665 113161592 -140094991 + HUERS-P1 LTR ERV1 2734 4682 -1264 1646 115 0 82 chr2 113161612 113161827 -140094756 + LTR8 LTR ERV1 332 521 -170 2208 75 0 0 chr2 113161827 113162169 -140094414 + AluSc SINE Alu 1 342 0 1646 115 0 82 chr2 113162169 113162231 -140094352 + LTR8 LTR ERV1 521 587 -104 306 279 144 0 chr2 113162261 113162372 -140094211 - L1M4 LINE L1 -1053 5093 4967 2241 85 0 3 chr2 113164321 113164616 -140091967 + AluY SINE Alu 1 294 -17 627 85 0 0 chr2 113165166 113165248 -140091335 + AluSg/x SINE Alu 217 298 -11 227 227 118 67 chr2 113165911 113166030 -140090553 - L1ME4a LINE L1 -24 6097 5973 505 220 156 0 chr2 113167487 113167628 -140088955 - L1ME3 LINE L1 -29 6133 5971 278 258 30 0 chr2 113168952 113169018 -140087565 - MLT1L LTR MaLR -201 414 347 491 276 146 5 chr2 113169092 113169215 -140087368 - MIR SINE MIR -33 229 125 2206 68 44 0 chr2 113169215 113169509 -140087074 + AluY SINE Alu 1 307 -4 491 276 146 5 chr2 113169509 113169570 -140087013 - MIR SINE MIR -137 125 19 897 309 62 21 chr2 113169815 113170187 -140086396 + L3 LINE CR1 590 976 -601 391 221 11 11 chr2 113170206 113170301 -140086282 - L1M4 LINE L1 -5618 924 830 333 296 15 22 chr2 113170329 113170464 -140086119 - L1M4 LINE L1 -6400 142 9 229 278 145 77 chr2 113170609 113170843 -140085740 + L3 LINE CR1 1196 1445 -132 1216 82 13 0 chr2 113170976 113171134 -140085449 - AluSp SINE Alu -22 291 132 2181 93 0 0 chr2 113171139 113171428 -140085155 - AluSg SINE Alu -15 295 7 295 357 14 21 chr2 113172540 113172683 -140083900 + MIR SINE MIR 90 231 -31 506 276 87 0 chr2 113172718 113172914 -140083669 + L2 LINE L2 2379 2591 -723 407 301 95 32 chr2 113172906 113173252 -140083331 + L2 LINE L2 2831 3198 -115 * 343 278 142 0 chr2 113173263 113173425 -140083158 + MER20 DNA MER1_type 33 217 -2 384 276 19 29 chr2 113173429 113173534 -140083049 + L2 LINE L2 3191 3294 -19 223 224 0 0 chr2 113173541 113173590 -140082993 + MIR SINE MIR 214 262 0 454 294 38 38 chr2 113173663 113173874 -140082709 + MIR SINE MIR 2 212 -50 566 310 139 18 chr2 113174823 113175410 -140081173 - L2 LINE L2 -1 3312 2656 1953 151 110 34 chr2 113175410 113175605 -140080978 + MSTB LTR MaLR 1 180 -246 1859 137 3 3 chr2 113175605 113175904 -140080679 + AluJb SINE Alu 1 299 -13 1953 151 110 34 chr2 113175904 113176091 -140080492 + MSTB LTR MaLR 180 412 -14 1318 278 125 45 chr2 113176091 113176419 -140080164 - L2 LINE L2 -655 2659 2359 2074 126 0 0 chr2 113176419 113176712 -140079871 + AluSx SINE Alu 1 293 -19 1318 278 125 45 chr2 113176712 113177030 -140079553 - L2 LINE L2 -955 2359 1961 4300 225 59 18 chr2 113177501 113178414 -140078169 + L1M4c LINE L1 986 1945 -4708 2210 109 0 6 chr2 113178414 113178726 -140077857 + AluSg SINE Alu 1 310 0 4300 225 59 18 chr2 113178726 113178805 -140077778 + L1M4c LINE L1 1945 2019 -4634 478 191 79 118 chr2 113178816 113179122 -140077461 + L1M4c LINE L1 2403 2695 -4039 1868 134 3 7 chr2 113179122 113179405 -140077178 + AluSx SINE Alu 11 292 -20 478 191 79 118 chr2 113179405 113179454 -140077129 + L1M4c LINE L1 2695 2744 -3990 1759 137 4 4 chr2 113179458 113179755 -140076828 + AluSx SINE Alu 14 310 0 2142 99 0 17 chr2 113179781 113180083 -140076500 + AluSg SINE Alu 14 310 0 8657 173 41 89 chr2 113180084 113180247 -140076336 + L1MA9 LINE L1 3031 3200 -3112 2084 99 0 3 chr2 113180247 113180553 -140076030 - AluSq SINE Alu 0 305 1 8657 173 41 89 chr2 113180553 113182367 -140074216 + L1MA9 LINE L1 3200 5099 -1213 284 191 24 60 chr2 113182367 113182451 -140074132 + Tigger2 DNA MER2_type 2410 2490 -228 8657 173 41 89 chr2 113182451 113183090 -140073493 + L1MA9 LINE L1 5099 5767 -545 232 140 0 0 chr2 113183090 113183147 -140073436 + LTR66 LTR ERVL 383 439 -171 8657 173 41 89 chr2 113183147 113183298 -140073285 + L1MA9 LINE L1 5767 5924 -388 320 62 0 21 chr2 113183298 113183346 -140073237 + (TA)n Simple_repeat Simple_repeat 1 47 0 8657 173 41 89 chr2 113183346 113183730 -140072853 + L1MA9 LINE L1 5924 6325 13 2025 100 0 30 chr2 113183730 113184029 -140072554 + AluY SINE Alu 1 290 -21 8657 173 41 89 chr2 113184029 113184096 -140072487 + L1MA9 LINE L1 6325 6233 -79 2321 148 88 0 chr2 113184096 113184182 -140072401 + Tigger2a DNA MER2_type 1 78 -2630 204 40 0 0 chr2 113184182 113184207 -140072376 + (TCC)n Simple_repeat Simple_repeat 2 26 0 2321 148 88 0 chr2 113184207 113184519 -140072064 + Tigger2a DNA MER2_type 78 434 0 8657 173 41 89 chr2 113184519 113184567 -140072016 + L1MA9 LINE L1 6232 6281 -31 265 295 93 0 chr2 113184756 113184885 -140071698 - L2 LINE L2 -184 3088 2948 229 337 43 54 chr2 113185082 113185266 -140071317 - L2 LINE L2 -693 2621 2440 688 213 38 19 chr2 113185852 113186012 -140070571 - LTR67 LTR ERVL 0 557 395 951 203 117 36 chr2 113186019 113186300 -140070283 + MER33 DNA MER1_type 1 304 -20 266 330 19 9 chr2 113186283 113186389 -140070194 - MLT1H LTR MaLR -363 186 80 * 2032 109 0 0 chr2 113187316 113187631 -140068952 - AluSg SINE Alu 0 315 1 255 109 0 0 chr2 113187656 113187702 -140068881 - L1MB4 LINE L1 -1 6179 6134 740 232 7 7 chr2 113187703 113187858 -140068725 + FAM SINE Alu 3 157 -18 2294 84 0 3 chr2 113187858 113188157 -140068426 - AluY SINE Alu -13 298 1 3507 161 6 25 chr2 113188176 113188811 -140067772 - L1MB3 LINE L1 -33 6150 5528 590 150 15 32 chr2 113190289 113190338 -140066245 - L1MB3 LINE L1 -1 6182 6134 2237 88 0 0 chr2 113190338 113190634 -140065949 - AluY SINE Alu -15 296 1 2219 102 0 13 chr2 113190634 113190936 -140065647 - AluSq SINE Alu -14 299 1 590 150 15 32 chr2 113190936 113191291 -140065292 - L1MB3 LINE L1 -47 6136 5670 268 301 73 32 chr2 113191382 113191505 -140065078 - MIR SINE MIR -8 254 127 216 195 158 49 chr2 113191652 113191734 -140064849 - MER5A DNA MER1_type -84 105 15 227 286 161 25 chr2 113192365 113192526 -140064057 - MIR3 SINE MIR -11 197 15 199 261 87 33 chr2 113192560 113192572 -140064011 - MIR SINE MIR -160 102 86 510 241 69 14 chr2 113192572 113192717 -140063866 + MIR SINE MIR 2 154 -108 278 325 88 9 chr2 113192901 113193015 -140063568 + MIR SINE MIR 8 130 -132 1051 82 0 0 chr2 113193015 113193149 -140063434 + AluSg SINE Alu 1 134 -176 2308 77 0 3 chr2 113193149 113193447 -140063136 + AluSc SINE Alu 1 297 -12 2103 199 42 50 chr2 113194021 113194524 -140062059 + LTR54 LTR ERV1 9 507 -3 355 285 13 20 chr2 113194581 113194732 -140061851 - L1MCc LINE L1 -6193 230 81 2444 209 77 51 chr2 113194738 113195442 -140061141 - MER72 LTR ERV1 0 722 1 420 209 181 60 chr2 113195875 113195966 -140060617 + HAL1 LINE L1 1610 1689 -818 2273 141 3 18 chr2 113195966 113196307 -140060276 + MER1B DNA MER1_type 1 336 -1 420 209 181 60 chr2 113196307 113196397 -140060186 + HAL1 LINE L1 1689 1813 -694 2149 94 0 7 chr2 113197044 113197352 -140059231 + AluY SINE Alu 1 306 -5 1385 381 10 0 chr2 113197894 113198196 -140058387 - AluY SINE Alu -6 305 1 212 175 0 0 chr2 113198228 113198268 -140058315 + A-rich Low_complexity Low_complexity 1 40 0 213 167 48 0 chr2 113198845 113198887 -140057696 - L2 LINE L2 -16 3256 3213 589 149 11 0 chr2 113199023 113199117 -140057466 - MER4E LTR ERV1 0 779 685 180 0 0 0 chr2 113199525 113199545 -140057038 + (CCCTG)n Simple_repeat Simple_repeat 5 24 0 229 277 6 145 chr2 113199963 113200026 -140056557 - MIR SINE MIR -69 139 69 243 0 0 0 chr2 113200026 113200053 -140056530 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2101 113 3 3 chr2 113200056 113200356 -140056227 + AluSx SINE Alu 1 300 -12 229 277 6 145 chr2 113200356 113200432 -140056151 - MIR SINE MIR -141 67 45 1367 152 58 26 chr2 113202543 113202780 -140053803 + MER33 DNA MER1_type 2 253 -2332 1836 158 3 7 chr2 113202780 113203084 -140053499 - AluJo SINE Alu -9 303 1 1367 152 58 26 chr2 113203084 113203155 -140053428 + MER33 DNA MER1_type 253 320 -4 25 0 0 0 chr2 113203336 113203361 -140053222 + AT_rich Low_complexity Low_complexity 1 25 0 2389 61 0 0 chr2 113204279 113204575 -140052008 - AluY SINE Alu -13 298 3 1134 70 0 0 chr2 113205186 113205329 -140051254 - AluSq/x SINE Alu -170 143 1 1924 201 65 17 chr2 113205851 113206263 -140050320 + MER70A LTR ERVL 38 469 -3 1266 208 117 40 chr2 113206889 113206954 -140049629 - L1ME2 LINE L1 0 6164 6105 2105 93 24 0 chr2 113206954 113207244 -140049339 + AluSc SINE Alu 1 297 -12 1266 208 117 40 chr2 113207244 113207847 -140048736 - L1ME2 LINE L1 -59 6105 5213 1979 123 20 0 chr2 113207884 113208058 -140048525 - AluSg SINE Alu -2 308 124 261 0 0 0 chr2 113208058 113208087 -140048496 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 1979 123 20 0 chr2 113208087 113208213 -140048370 - AluSg SINE Alu -186 124 2 2255 88 3 0 chr2 113208290 113208586 -140047997 - AluSg1 SINE Alu -12 297 1 1420 174 0 57 chr2 113208699 113208997 -140047586 - AluJo SINE Alu -31 281 1 249 253 103 69 chr2 113209241 113209328 -140047255 + L2 LINE L2 3196 3285 -28 198 0 0 0 chr2 113209973 113209995 -140046588 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 1467 188 3 24 chr2 113210074 113210390 -140046193 - AluJo SINE Alu 0 312 3 320 134 85 0 chr2 113210475 113210557 -140046026 + L1ME4a LINE L1 6032 6120 -1 2350 83 0 0 chr2 113210842 113211144 -140045439 - AluSx SINE Alu -10 302 1 1662 129 12 0 chr2 113211163 113211411 -140045172 - L1PB4 LINE L1 -13 6143 5893 2563 44 0 0 chr2 113212371 113212668 -140043915 - AluY SINE Alu -11 300 4 220 229 0 0 chr2 113214144 113214192 -140042391 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 384 313 128 5 chr2 113214641 113214836 -140041747 - MIR SINE MIR -40 222 4 598 294 127 55 chr2 113214938 113215546 -140041037 - L2 LINE L2 -1 3271 2623 466 244 53 49 chr2 113217258 113217483 -140039100 - MLT1H LTR MaLR -258 291 66 2384 71 3 22 chr2 113217528 113217839 -140038744 + AluY SINE Alu 3 307 -4 728 204 22 0 chr2 113217942 113218079 -140038504 - Tigger2 DNA MER2_type -4 2714 2575 241 214 71 0 chr2 113218181 113218237 -140038346 + L2 LINE L2 3254 3313 0 2280 128 0 0 chr2 113218267 113218579 -140038004 - AluSq SINE Alu -1 312 1 623 258 50 11 chr2 113219205 113219387 -140037196 + MER5A DNA MER1_type 1 189 0 2419 73 3 13 chr2 113221046 113221359 -140035224 - AluSg SINE Alu 0 310 1 25 31 0 0 chr2 113221763 113221795 -140034788 + AT_rich Low_complexity Low_complexity 1 32 0 192 391 0 0 chr2 113223046 113223115 -140033468 + L2 LINE L2 3108 3176 -96 213 39 0 0 chr2 113223185 113223211 -140033372 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 180 0 0 0 chr2 113223457 113223477 -140033106 + (A)n Simple_repeat Simple_repeat 1 20 0 2443 101 10 0 chr2 113223487 113223795 -140032788 + AluY SINE Alu 1 311 0 2250 84 7 3 chr2 113223924 113224209 -140032374 + AluY SINE Alu 1 286 -25 28 29 0 0 chr2 113224209 113224244 -140032339 + AT_rich Low_complexity Low_complexity 1 35 0 284 193 118 42 chr2 113224250 113224369 -140032214 - L1ME4a LINE L1 0 6121 5994 1260 166 0 90 chr2 113224374 113224675 -140031908 - AluJo SINE Alu 0 312 39 429 306 28 17 chr2 113224749 113224929 -140031654 - L1ME4a LINE L1 -196 5925 5744 852 244 75 53 chr2 113225017 113225304 -140031279 - HAL1 LINE L1 -82 2425 2127 1325 171 238 7 chr2 113225304 113225603 -140030980 - MLT1A2 LTR MaLR -2 372 5 852 244 75 53 chr2 113225603 113225675 -140030908 - HAL1 LINE L1 -380 2127 2058 575 255 133 23 chr2 113225676 113225939 -140030644 - MLT2F LTR ERVL -333 330 39 2050 251 123 89 chr2 113225943 113227279 -140029304 - HAL1 LINE L1 -652 1855 474 2494 66 0 0 chr2 113227499 113227804 -140028779 + AluY SINE Alu 1 305 -6 2099 103 46 0 chr2 113228462 113228743 -140027840 - AluSg SINE Alu -16 294 1 306 246 84 108 chr2 113229599 113229706 -140026877 + MIR SINE MIR 36 139 -123 2427 97 0 0 chr2 113229706 113230015 -140026568 + AluSc SINE Alu 1 309 0 306 246 84 108 chr2 113230015 113230074 -140026509 + MIR SINE MIR 139 198 -64 1653 97 3 91 chr2 113230074 113230342 -140026241 + Tigger2a DNA MER2_type 1 240 -2468 2301 126 0 0 chr2 113230342 113230652 -140025931 + AluSx SINE Alu 1 310 -2 1653 97 3 91 chr2 113230652 113230692 -140025891 + Tigger2a DNA MER2_type 240 282 -152 996 89 0 0 chr2 113230792 113230915 -140025668 - AluSp SINE Alu -190 123 1 587 175 0 0 chr2 113231159 113231256 -140025327 + LTR8A LTR ERV1 1 97 -630 2116 194 54 22 chr2 113231530 113232067 -140024516 - L1MB4 LINE L1 -2 6178 5625 2492 54 30 0 chr2 113232216 113232513 -140024070 + AluY SINE Alu 1 306 -5 315 264 46 0 chr2 113232595 113232682 -140023901 - MER94 DNA DNA -2 132 42 1611 178 27 20 chr2 113232830 113233128 -140023455 - AluJo SINE Alu -10 302 3 1112 89 82 0 chr2 113233486 113233632 -140022951 + AluY SINE Alu 1 158 -153 2117 139 7 3 chr2 113233663 113233965 -140022618 + AluSx SINE Alu 1 303 -9 1915 170 0 3 chr2 113234689 113234995 -140021588 + AluJb SINE Alu 1 305 -7 189 315 0 37 chr2 113235477 113235531 -140021052 - L3b LINE CR1 -26 1557 1506 324 70 0 0 chr2 113235624 113235667 -140020916 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 916 126 0 0 chr2 113235667 113235786 -140020797 - FLAM_C SINE Alu -24 119 1 230 0 0 32 chr2 113235833 113235864 -140020719 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 235 162 0 0 chr2 113236685 113236722 -140019861 - L2 LINE L2 0 3272 3236 272 274 0 0 chr2 113237162 113237224 -140019359 + L2 LINE L2 3210 3271 -1 183 42 0 0 chr2 113237443 113237467 -140019116 + (TTG)n Simple_repeat Simple_repeat 2 25 0 704 126 48 0 chr2 113237480 113237583 -140019000 - FLAM_A SINE Alu -34 108 1 446 225 56 7 chr2 113237830 113237977 -140018606 - MLT1A1 LTR MaLR -3 362 247 270 306 121 8 chr2 113238058 113238182 -140018401 - MLT1A1 LTR MaLR -186 179 42 1819 195 131 10 chr2 113240064 113240380 -140016203 - LOR1b LTR ERV1 0 461 185 2230 89 3 10 chr2 113240380 113240672 -140015911 + AluSx SINE Alu 9 298 -14 2210 85 3 38 chr2 113240682 113240998 -140015585 + AluSc SINE Alu 1 305 -4 1819 195 131 10 chr2 113240998 113241081 -140015502 - LOR1b LTR ERV1 -283 178 1 718 284 35 46 chr2 113241995 113242365 -140014218 + L1MDa LINE L1 18 383 -6157 915 192 93 27 chr2 113242502 113242835 -140013748 + L1MDa LINE L1 1644 1998 -4542 * 4763 261 53 14 chr2 113242809 113243428 -140013155 + L1M4 LINE L1 3771 4364 -2176 2047 151 6 19 chr2 113243428 113243564 -140013019 + AluJo SINE Alu 1 137 -175 1943 140 0 18 chr2 113243564 113243878 -140012705 + AluSx SINE Alu 1 309 0 2047 151 6 19 chr2 113243878 113244052 -140012531 + AluJo SINE Alu 137 308 -4 4763 261 53 14 chr2 113244052 113245017 -140011566 + L1M4 LINE L1 4364 5417 -1123 842 173 14 0 chr2 113245056 113245195 -140011388 + AluJb SINE Alu 1 141 -171 30 0 0 0 chr2 113245210 113245240 -140011343 + AT_rich Low_complexity Low_complexity 1 30 0 481 226 27 41 chr2 113245240 113245386 -140011197 + L1M4 LINE L1 5547 5690 -850 557 247 65 23 chr2 113245397 113245636 -140010947 - L1MC/D LINE L1 -576 5659 5461 2131 184 15 7 chr2 113245637 113246040 -140010543 + MLT2D LTR ERVL 1 406 -8 2407 75 0 3 chr2 113246060 113246352 -140010231 - AluSc SINE Alu -18 291 1 33 56 0 0 chr2 113246428 113246482 -140010101 + AT_rich Low_complexity Low_complexity 1 54 0 3006 265 44 61 chr2 113246510 113247477 -140009106 - L1MC/D LINE L1 -824 5391 4409 2507 71 0 3 chr2 113247477 113247786 -140008797 + AluY SINE Alu 1 308 -3 3006 265 44 61 chr2 113247786 113248229 -140008354 - L1MC/D LINE L1 -1806 4409 4013 2019 104 3 60 chr2 113248229 113248545 -140008038 - AluSx SINE Alu -14 298 1 3006 265 44 61 chr2 113248545 113248856 -140007727 - L1MC/D LINE L1 -2202 4013 3698 371 281 163 20 chr2 113248896 113249092 -140007491 - L1MC/D LINE L1 -4807 1589 1366 2146 104 28 0 chr2 113250052 113250339 -140006244 - AluSx SINE Alu -17 295 1 2262 81 0 11 chr2 113250945 113251253 -140005330 + AluY SINE Alu 3 307 0 26 0 0 0 chr2 113252698 113252724 -140003859 + AT_rich Low_complexity Low_complexity 1 26 0 2529 78 0 0 chr2 113252728 113253037 -140003546 + AluY SINE Alu 1 309 -2 264 159 0 0 chr2 113253252 113253296 -140003287 - MSTD LTR MaLR -352 44 1 1673 178 92 22 chr2 113254988 113255358 -140001225 - MSTD LTR MaLR 0 396 1 311 222 14 0 chr2 113255552 113255624 -140000959 + MER58 DNA MER1_type 2348 2420 0 710 169 169 6 chr2 113255797 113255957 -140000626 + MER5A DNA MER1_type 4 189 0 196 204 23 0 chr2 113256187 113256231 -140000352 - L2 LINE L2 0 3313 3269 22 35 0 0 chr2 113306873 113306902 -139949681 + AT_rich Low_complexity Low_complexity 1 29 0 210 37 0 0 chr2 113309226 113309253 -139947330 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 279 226 113 48 chr2 113309590 113309714 -139946869 - MER20 DNA MER1_type -82 137 6 289 239 53 86 chr2 113309722 113309897 -139946686 - L1MC4 LINE L1 -447 7595 7326 1575 211 3 19 chr2 113309955 113310268 -139946315 + AluJb SINE Alu 5 312 0 1678 122 94 49 chr2 113310287 113310573 -139946010 - AluSx SINE Alu -13 299 1 2433 87 0 3 chr2 113311234 113311544 -139945039 + AluY SINE Alu 1 309 -2 1587 174 7 35 chr2 113311552 113311839 -139944744 + AluJo SINE Alu 1 279 -33 234 253 263 0 chr2 113313069 113313164 -139943419 - L2 LINE L2 0 3272 3153 966 232 201 38 chr2 113313260 113313713 -139942870 + MLT1G1 LTR MaLR 1 595 0 664 231 137 0 chr2 113314356 113314538 -139942045 + MER63A DNA MER1_type 1 207 -3 2206 204 79 0 chr2 113314845 113315365 -139941218 - L1MB3 LINE L1 -2 6181 5621 212 304 11 43 chr2 113316327 113316419 -139940164 + L3 LINE CR1 630 718 -859 2197 113 10 3 chr2 113316666 113316968 -139939615 - AluSx SINE Alu -8 304 1 22 35 0 0 chr2 113318624 113318653 -139937930 + GC_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr2 113318891 113318933 -139937650 + GC_rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr2 113318966 113318990 -139937593 + GC_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr2 113319735 113319760 -139936823 + AT_rich Low_complexity Low_complexity 1 25 0 28 29 0 0 chr2 113322374 113322409 -139934174 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 113322697 113322718 -139933865 + AT_rich Low_complexity Low_complexity 1 21 0 406 277 193 6 chr2 113323057 113323223 -139933360 - MIR SINE MIR -10 252 56 197 322 200 0 chr2 113323533 113323648 -139932935 - MIR SINE MIR -52 210 73 229 355 171 7 chr2 113324335 113324487 -139932096 + MIR SINE MIR 51 227 -35 262 219 16 0 chr2 113324609 113324673 -139931910 + (TG)n Simple_repeat Simple_repeat 1 65 0 233 305 51 0 chr2 113325953 113326012 -139930571 - L2 LINE L2 -5 3267 3206 2062 98 7 43 chr2 113327003 113327308 -139929275 - AluSg SINE Alu -16 294 1 407 316 47 16 chr2 113327786 113327976 -139928607 - L2 LINE L2 0 3313 3118 22 0 0 0 chr2 113328535 113328557 -139928026 + AT_rich Low_complexity Low_complexity 1 22 0 2303 87 13 3 chr2 113329359 113329658 -139926925 - AluY SINE Alu -9 302 1 278 219 61 0 chr2 113332217 113332299 -139924284 - MER113 DNA MER1_type? -359 162 76 2766 150 51 87 chr2 113332352 113332478 -139924105 + L1MA9 LINE L1 5656 5785 -527 1904 149 0 36 chr2 113332478 113332804 -139923779 + AluJo SINE Alu 1 315 0 2766 150 51 87 chr2 113332804 113333355 -139923228 + L1MA9 LINE L1 5785 6312 0 229 250 25 38 chr2 113334928 113335008 -139921575 + MIR SINE MIR 24 102 -160 707 293 162 25 chr2 113337966 113338647 -139917936 + L2 LINE L2 2501 3276 -37 1977 120 72 0 chr2 113339456 113339732 -139916851 - AluSx SINE Alu -12 300 5 288 122 41 20 chr2 113340532 113340630 -139915953 + (TG)n Simple_repeat Simple_repeat 1 100 0 2265 109 3 0 chr2 113342129 113342432 -139914151 - AluSx SINE Alu -8 304 1 2043 188 34 74 chr2 113342954 113343181 -139913402 - L1MA10 LINE L1 -1 6333 6098 1471 114 5 0 chr2 113343181 113343374 -139913209 + AluSp SINE Alu 106 299 -14 2043 188 34 74 chr2 113343374 113343698 -139912885 - L1MA10 LINE L1 -236 6098 5804 343 151 12 70 chr2 113343876 113343962 -139912621 - Charlie5 DNA MER1_type -2487 125 45 9722 30 0 1 chr2 113346679 113348592 -139907991 - L1PA2 LINE L1 0 6155 4244 15387 30 6 0 chr2 113348592 113350524 -139906059 + L1P LINE L1 1970 3912 -2234 1676 176 126 25 chr2 113351247 113351605 -139904978 - MSTD LTR MaLR 0 396 3 24 53 0 0 chr2 113351872 113351910 -139904673 + AT_rich Low_complexity Low_complexity 1 38 0 214 265 0 0 chr2 113352570 113352619 -139903964 - MIR3 SINE MIR -51 157 109 356 233 92 33 chr2 113352837 113352957 -139903626 - MIR SINE MIR -47 215 89 204 228 79 119 chr2 113353020 113353121 -139903462 + MIR SINE MIR 49 145 -117 842 297 13 0 chr2 113355356 113355588 -139900995 - MIR SINE MIR -20 242 8 1278 217 112 0 chr2 113356558 113356871 -139899712 + MER7A DNA MER2_type 1 346 0 2046 102 15 0 chr2 113358494 113358759 -139897824 - AluSg SINE Alu -7 303 35 2366 98 0 0 chr2 113359304 113359600 -139896983 - AluSq SINE Alu -17 296 1 202 286 0 20 chr2 113359957 113360006 -139896577 - L2 LINE L2 -8 3264 3217 396 215 108 1 chr2 113360112 113360238 -139896345 - MER58B DNA MER1_type -1 340 204 994 214 85 16 chr2 113362413 113362839 -139893744 - L1MB7 LINE L1 -4 6158 5686 213 198 33 110 chr2 113363003 113363094 -139893489 + MER91A DNA MER1_type 9 92 -104 681 259 40 5 chr2 113365971 113366172 -139890411 - MIR SINE MIR -32 230 23 398 261 52 30 chr2 113366340 113366474 -139890109 + MIR SINE MIR 13 149 -113 415 162 81 9 chr2 113366596 113366707 -139889876 + MER45C DNA AcHobo 59 177 -776 * 527 274 186 24 chr2 113366686 113366938 -139889645 + MER45C DNA AcHobo 659 951 -2 1131 199 42 62 chr2 113367481 113367788 -139888795 - MLT1A1 LTR MaLR 0 365 65 937 228 94 0 chr2 113367786 113368019 -139888564 - MER7A DNA MER2_type -93 253 1 * 1452 74 11 0 chr2 113368092 113368268 -139888315 + AluY SINE Alu 3 180 -131 592 71 0 0 chr2 113368269 113368339 -139888244 + AluY SINE Alu 217 286 -25 1620 0 0 0 chr2 113368343 113368770 -139887813 + (GAATG)n Satellite Satellite 1 427 0 238 237 17 0 chr2 113368784 113368843 -139887740 - MLT1A1 LTR MaLR -314 60 1 310 172 126 16 chr2 113368862 113368997 -139887586 + MER20 DNA MER1_type 31 216 -3 324 240 25 16 chr2 113369773 113369894 -139886689 - MER45C DNA AcHobo -130 823 702 221 294 59 12 chr2 113373167 113373252 -139883331 + MIR SINE MIR 56 144 -118 246 270 110 0 chr2 113374062 113374162 -139882421 - L2 LINE L2 -23 3290 3180 191 319 121 11 chr2 113374624 113374715 -139881868 - L2 LINE L2 -23 3290 3190 402 241 120 0 chr2 113374933 113375091 -139881492 - MER5B DNA MER1_type -1 177 1 210 299 48 64 chr2 113375176 113375363 -139881220 - L2 LINE L2 -260 3012 2829 662 217 56 67 chr2 113375492 113375672 -139880911 - MIR SINE MIR -64 198 21 188 203 145 0 chr2 113375707 113375776 -139880807 - L2 LINE L2 -1836 1478 1400 1047 226 75 16 chr2 113376417 113376723 -139879860 - MER33 DNA MER1_type 0 324 1 351 204 112 0 chr2 113378871 113378969 -139877614 - MER45A DNA AcHobo 0 178 70 2360 76 3 7 chr2 113380288 113380589 -139875994 - AluY SINE Alu -11 300 1 2366 96 10 0 chr2 113381438 113381731 -139874852 - AluSq SINE Alu -17 296 1 190 269 77 19 chr2 113382579 113382631 -139873952 - MIR3 SINE MIR -145 63 9 290 314 191 10 chr2 113382965 113383159 -139873424 - MIR SINE MIR -2 260 32 193 356 14 0 chr2 113383781 113383854 -139872729 - MIR SINE MIR -20 242 169 1949 111 0 4 chr2 113383861 113384123 -139872460 + AluSx SINE Alu 40 300 -12 3503 137 27 0 chr2 113384566 113385079 -139871504 + MER1A DNA MER1_type 1 527 0 377 276 68 73 chr2 113385537 113385721 -139870862 - MIR SINE MIR -66 196 5 1635 163 123 8 chr2 113386535 113386892 -139869691 - MSTB1 LTR MaLR -33 399 2 21 0 0 0 chr2 113387379 113387400 -139869183 + AT_rich Low_complexity Low_complexity 1 21 0 2217 28 3 5 chr2 113387400 113387787 -139868796 - L1PA4 LINE L1 0 6155 5582 2896 6 0 3 chr2 113388375 113388686 -139867897 - AluYa5 SINE Alu -1 310 1 1558 201 3 29 chr2 113389157 113389471 -139867112 - AluJo SINE Alu -6 306 1 608 276 38 38 chr2 113389588 113389798 -139866785 + MER63A DNA MER1_type 1 210 0 2142 112 49 0 chr2 113391185 113391471 -139865112 + AluSc SINE Alu 1 300 -9 2128 114 7 0 chr2 113392542 113392859 -139863724 - AluY SINE Alu 0 319 1 226 242 65 0 chr2 113392871 113392933 -139863650 + L2 LINE L2 3182 3247 -66 866 46 15 15 chr2 113395200 113395330 -139861253 + (TTCTC)n Simple_repeat Simple_repeat 5 134 0 2185 117 7 13 chr2 113395331 113395638 -139860945 - AluSx SINE Alu -7 305 1 269 231 0 0 chr2 113395688 113395740 -139860843 - L2 LINE L2 0 3313 3262 269 158 86 52 chr2 113398013 113398111 -139858472 + L1ME4a LINE L1 1243 6094 -5 261 294 9 46 chr2 113398504 113398613 -139857970 + MER58B DNA MER1_type 213 317 -24 189 350 0 41 chr2 113401078 113401175 -139855408 - L2 LINE L2 -2 3270 3178 1779 182 0 17 chr2 113401436 113401733 -139854850 + AluJo SINE Alu 1 292 -20 229 220 41 29 chr2 113401969 113402052 -139854531 + MIR SINE MIR 21 107 -104 297 0 0 0 chr2 113403990 113404023 -139852560 + (TG)n Simple_repeat Simple_repeat 2 34 0 249 242 128 94 chr2 113404321 113404446 -139852137 - MIR3 SINE MIR -52 156 24 1020 198 185 40 chr2 113404446 113404819 -139851764 - MSTC LTR MaLR 0 428 2 249 242 128 94 chr2 113404819 113404842 -139851741 - MIR3 SINE MIR -184 24 3 2292 126 19 22 chr2 113405449 113405814 -139850769 + THE1B LTR MaLR 1 364 0 1118 223 23 0 chr2 113406162 113406422 -139850161 - L1MD3 LINE L1 0 7995 7730 251 304 87 0 chr2 113406803 113406895 -139849688 - L2 LINE L2 -36 3236 3137 258 310 45 45 chr2 113407065 113407265 -139849318 - MLT1L LTR MaLR 0 615 416 264 235 44 0 chr2 113407374 113407442 -139849141 - MLT1L LTR MaLR -328 287 217 188 290 87 14 chr2 113407676 113407745 -139848838 - L2 LINE L2 -530 2784 2711 258 81 0 0 chr2 113407745 113407782 -139848801 + (GTGTG)n Simple_repeat Simple_repeat 3 39 0 234 321 137 15 chr2 113408104 113408235 -139848348 - L2 LINE L2 -996 2318 2172 435 94 31 0 chr2 113408361 113408425 -139848158 + L1PA6 LINE L1 6087 6152 -2 326 265 34 60 chr2 113408651 113408768 -139847815 + MIR SINE MIR 27 140 -68 318 295 29 0 chr2 113410181 113410286 -139846297 - MLT2E LTR ERVL -490 138 31 223 300 75 8 chr2 113410302 113410422 -139846161 - MIR SINE MIR -39 223 96 2404 137 43 9 chr2 113410731 113411168 -139845415 - L1MB3 LINE L1 0 6183 5732 4971 218 50 14 chr2 113413382 113415107 -139841476 + L1MB4 LINE L1 4102 5884 -296 997 123 18 68 chr2 113415165 113415267 -139841316 - L1MB3 LINE L1 -789 5514 5427 2275 116 3 0 chr2 113415267 113415569 -139841014 + AluSx SINE Alu 1 303 -9 997 123 18 68 chr2 113415569 113415685 -139840898 - L1MB3 LINE L1 -876 5427 5307 4445 139 38 1 chr2 113415685 113416449 -139840134 + L1MA4A LINE L1 5505 6296 -7 991 161 0 31 chr2 113417815 113417977 -139838606 + AluJb SINE Alu 135 291 -21 323 259 25 12 chr2 113418015 113418096 -139838487 - MIR3 SINE MIR -13 195 114 729 188 5 109 chr2 113418422 113418543 -139838040 + MER3 DNA MER1_type 25 118 -91 2165 115 3 0 chr2 113418543 113418830 -139837753 + AluSx SINE Alu 2 289 -23 729 188 5 109 chr2 113418830 113418910 -139837673 + MER3 DNA MER1_type 118 205 -4 318 226 179 19 chr2 113419055 113419161 -139837422 + MIR3 SINE MIR 73 195 -13 886 179 6 23 chr2 113419725 113419898 -139836685 - AluJb SINE Alu -9 303 134 289 280 30 0 chr2 113420869 113420969 -139835614 - MLT1K LTR MaLR -77 511 409 714 241 67 31 chr2 113422381 113422605 -139833978 - MER21B LTR ERV1 -44 819 588 1351 259 88 36 chr2 113422623 113423067 -139833516 - MER21B LTR ERV1 -378 485 19 471 165 9 87 chr2 113423065 113423180 -139833403 - MER21B LTR ERV1 -757 106 1 * 579 216 216 5 chr2 113423236 113423444 -139833139 - L1MC3 LINE L1 -61 7724 7473 961 182 100 0 chr2 113423444 113423664 -139832919 - MER74A LTR ERVL -316 242 1 740 140 43 81 chr2 113423664 113423777 -139832806 - L1MB4 LINE L1 -243 5937 5832 2580 77 0 0 chr2 113423777 113424088 -139832495 - AluY SINE Alu 0 311 1 740 140 43 81 chr2 113424088 113424160 -139832423 - L1MB4 LINE L1 -348 5832 5759 406 235 0 0 chr2 113424164 113424249 -139832334 + Tigger5 DNA MER2_type 1 85 -2238 1901 164 6 13 chr2 113424258 113424570 -139832013 + AluSx SINE Alu 1 310 -2 353 188 0 0 chr2 113424592 113424656 -139831927 - Tigger5 DNA MER2_type -7 2316 2253 387 227 0 11 chr2 113424678 113424766 -139831817 + Tigger5 DNA MER2_type 2237 2323 0 672 163 16 8 chr2 113425821 113425944 -139830639 - L1MB8 LINE L1 -6 6172 6049 1284 221 103 3 chr2 113425945 113426275 -139830308 - L1MB8 LINE L1 -357 5821 5459 391 300 71 24 chr2 113426352 113426522 -139830061 + MIR SINE MIR 74 251 -11 1997 235 61 25 chr2 113426801 113426897 -139829686 - L1ME1 LINE L1 -4 6162 6071 3189 174 153 31 chr2 113426897 113427633 -139828950 - LTR1B LTR ERV1 0 826 1 1997 235 61 25 chr2 113427633 113428127 -139828456 - L1ME1 LINE L1 -95 6071 5551 236 313 118 0 chr2 113428248 113428392 -139828191 + MER103 DNA DNA 3 163 -3 394 301 14 7 chr2 113428496 113428639 -139827944 - MLT1I LTR MaLR 0 409 266 255 303 101 0 chr2 113428719 113428838 -139827745 - MLT1I LTR MaLR -278 131 1 297 216 165 0 chr2 113429393 113429490 -139827093 + MER94 DNA DNA 19 131 -3 227 298 119 67 chr2 113431267 113431457 -139825126 + L1ME LINE L1 5378 5557 -564 1517 112 31 9 chr2 113431457 113431681 -139824902 - MER30 DNA MER1_type 0 230 2 227 298 119 67 chr2 113431681 113431909 -139824674 + L1ME LINE L1 5557 5818 -303 1274 193 128 0 chr2 113431924 113432189 -139824394 + AluJo SINE Alu 8 306 -6 450 0 0 0 chr2 113432416 113432466 -139824117 + (TG)n Simple_repeat Simple_repeat 1 50 0 366 143 0 0 chr2 113432470 113432526 -139824057 - AluS SINE Alu -19 282 227 332 274 10 20 chr2 113434079 113434181 -139822402 + MIR SINE MIR 47 147 -61 1730 116 60 12 chr2 113434185 113434435 -139822148 + AluSx SINE Alu 1 262 -50 209 57 29 0 chr2 113434435 113434470 -139822113 + (CAAA)n Simple_repeat Simple_repeat 4 39 0 205 265 15 15 chr2 113434846 113434914 -139821669 + CT-rich Low_complexity Low_complexity 1 68 0 1316 46 0 0 chr2 113435736 113435888 -139820695 - AluY SINE Alu -15 296 145 417 266 95 25 chr2 113436174 113436332 -139820251 - MER5B DNA MER1_type -5 173 5 272 313 118 32 chr2 113437425 113437836 -139818747 - L2 LINE L2 -101 3212 2693 219 154 26 0 chr2 113437837 113437876 -139818707 + (TGAG)n Simple_repeat Simple_repeat 1 40 0 451 290 125 16 chr2 113439959 113440124 -139816459 + MIR SINE MIR 5 182 -58 2017 195 6 3 chr2 113440135 113440499 -139816084 - MLT1A1 LTR MaLR 0 365 1 367 213 72 65 chr2 113441681 113441982 -139814601 - MLT1H LTR MaLR 0 575 132 409 279 26 63 chr2 113442183 113442373 -139814210 - L1M4 LINE L1 -972 5174 4992 628 179 11 33 chr2 113442657 113442841 -139813742 + CT-rich Low_complexity Low_complexity 1 180 0 462 65 0 0 chr2 113442844 113442906 -139813677 + (TCCTG)n Simple_repeat Simple_repeat 4 65 0 1263 192 13 13 chr2 113442919 113443143 -139813440 - AluJo SINE Alu -88 224 1 2225 87 13 29 chr2 113443417 113443793 -139812790 - AluY SINE Alu 0 311 122 180 97 0 0 chr2 113443793 113443824 -139812759 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2225 87 13 29 chr2 113443824 113443945 -139812638 - AluY SINE Alu -189 122 1 32 0 0 0 chr2 113444430 113444462 -139812121 + AT_rich Low_complexity Low_complexity 1 32 0 210 71 0 0 chr2 113444551 113444579 -139812004 + (TAA)n Simple_repeat Simple_repeat 2 29 0 21 57 0 0 chr2 113444867 113444902 -139811681 + AT_rich Low_complexity Low_complexity 1 35 0 2263 104 0 16 chr2 113444959 113445268 -139811315 - AluSx SINE Alu -8 304 1 21 0 0 0 chr2 113445768 113445789 -139810794 + AT_rich Low_complexity Low_complexity 1 21 0 1663 186 10 26 chr2 113445924 113446230 -139810353 + AluJb SINE Alu 3 303 -9 520 238 0 0 chr2 113446435 113446536 -139810047 + MER81 DNA DNA 1 101 -13 1629 153 39 53 chr2 113446542 113446901 -139809682 - MER47A DNA MER2_type -12 354 1 2178 116 30 7 chr2 113446977 113447280 -139809303 - AluSx SINE Alu -2 310 1 335 225 0 42 chr2 113447944 113448015 -139808568 + MER91B DNA MER1_type 17 84 -106 774 210 195 0 chr2 113448241 113448446 -139808137 + MIR SINE MIR 8 252 -10 195 186 0 0 chr2 113449078 113449121 -139807462 + (TG)n Simple_repeat Simple_repeat 1 43 0 403 146 28 35 chr2 113451280 113451424 -139805159 + GA-rich Low_complexity Low_complexity 3 145 0 189 259 71 35 chr2 113455744 113455829 -139800754 - MIR3 SINE MIR -3 205 118 23 0 0 0 chr2 113455834 113455857 -139800726 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 113456774 113456795 -139799788 + AT_rich Low_complexity Low_complexity 1 21 0 2154 122 0 41 chr2 113456805 113457125 -139799458 - AluSx SINE Alu -5 307 1 359 332 20 25 chr2 113457173 113457417 -139799166 - L1M4c LINE L1 -4543 1841 1599 2269 91 0 10 chr2 113457664 113457961 -139798622 + AluY SINE Alu 1 294 -17 506 130 58 29 chr2 113459981 113460327 -139796256 + (TG)n Simple_repeat Simple_repeat 1 355 0 1680 189 6 18 chr2 113462609 113462947 -139793636 + MER47A DNA MER2_type 33 366 0 1903 127 8 0 chr2 113463504 113463771 -139792812 + AluSx SINE Alu 1 269 -43 185 267 67 0 chr2 113465013 113465058 -139791525 - MIR SINE MIR -15 247 200 2714 179 23 6 chr2 113468282 113468806 -139787777 + L1MB5 LINE L1 5634 6166 -8 698 105 53 0 chr2 113468880 113468994 -139787589 + L1MB5 LINE L1 6047 6166 -8 203 306 16 0 chr2 113471011 113471073 -139785510 - L2 LINE L2 -10 3262 3200 1861 155 7 14 chr2 113471898 113472195 -139784388 + AluJb SINE Alu 1 295 -17 308 206 245 0 chr2 113474256 113474358 -139782225 - MIR3 SINE MIR -14 194 68 299 303 101 50 chr2 113474804 113475042 -139781541 - MIR SINE MIR -12 250 1 197 343 22 37 chr2 113477688 113477822 -139778761 - MIR3 SINE MIR -62 146 15 247 320 31 0 chr2 113480621 113480718 -139775865 + MER46C DNA MER2_type 12 111 -227 184 306 14 42 chr2 113481075 113481147 -139775436 + MIR SINE MIR 109 178 -84 390 307 96 24 chr2 113481693 113481944 -139774639 + LTR33 LTR ERVL 248 516 -5 274 299 0 52 chr2 113484163 113484260 -139772323 + MIR3 SINE MIR 95 186 -22 369 266 0 18 chr2 113484362 113484471 -139772112 - MER5A DNA MER1_type -80 109 3 195 304 104 52 chr2 113485204 113485339 -139771244 + L2 LINE L2 3153 3294 -19 2419 87 3 0 chr2 113486210 113486508 -139770075 - AluY SINE Alu -12 299 1 445 297 126 40 chr2 113486528 113486908 -139769675 - L1ME4a LINE L1 -1 6120 5708 2299 107 3 0 chr2 113487073 113487373 -139769210 - AluSq SINE Alu -8 305 5 2111 128 3 28 chr2 113488626 113488945 -139767638 + AluSx SINE Alu 2 312 0 325 300 83 33 chr2 113489304 113489484 -139767099 - MIR SINE MIR -6 256 68 459 302 47 6 chr2 113489579 113489751 -139766832 - MIR SINE MIR -55 207 29 185 297 129 34 chr2 113490450 113490571 -139766012 + L2 LINE L2 2545 2653 -661 1954 143 0 44 chr2 113490571 113490886 -139765697 - AluSq SINE Alu -12 301 1 185 297 129 34 chr2 113490886 113490973 -139765610 + L2 LINE L2 2653 2773 -541 2336 201 41 38 chr2 113491763 113492374 -139764209 - L1MB5 LINE L1 0 6174 5562 289 318 0 0 chr2 113494432 113494517 -139762066 - MER3 DNA MER1_type -124 85 1 2576 193 123 5 chr2 113495953 113496554 -139760029 - L1MC2 LINE L1 -13 6331 5660 312 274 211 10 chr2 113500224 113500421 -139756162 + MIR SINE MIR 3 233 -29 333 313 10 0 chr2 113501472 113501568 -139755015 + GA-rich Low_complexity Low_complexity 6 102 0 3207 186 56 3 chr2 113503256 113503935 -139752648 - L1MB7 LINE L1 -47 6137 5423 222 37 0 0 chr2 113504723 113504750 -139751833 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 990 176 6 0 chr2 113504751 113504916 -139751667 - FRAM SINE Alu 0 166 1 397 269 37 22 chr2 113504960 113505094 -139751489 - L3 LINE CR1 -76 1501 1366 343 353 73 34 chr2 113505560 113505764 -139750819 - L1ME3 LINE L1 -216 5946 5735 815 238 31 27 chr2 113505853 113506116 -139750467 - L1MB5 LINE L1 -608 5556 5298 237 354 79 22 chr2 113506153 113506331 -139750252 - MIR SINE MIR -41 221 34 783 292 150 30 chr2 113506355 113507222 -139749361 - L1MB5 LINE L1 -866 5280 4310 1152 289 44 39 chr2 113507301 113507962 -139748621 - L1MC5 LINE L1 -30 7931 7268 395 195 35 6 chr2 113509989 113510158 -139746425 + (TGGA)n Simple_repeat Simple_repeat 4 177 0 183 286 79 0 chr2 113510315 113510378 -139746205 + L2 LINE L2 3200 3267 -5 494 260 46 78 chr2 113510911 113511192 -139745391 + L2 LINE L2 3042 3313 0 647 219 89 12 chr2 113512919 113513088 -139743495 + MER58A DNA MER1_type 43 224 0 686 254 13 45 chr2 113513088 113513312 -139743271 + MIR SINE MIR 9 225 -37 1626 157 42 51 chr2 113513490 113513802 -139742781 + AluJb SINE Alu 3 311 -1 536 293 28 36 chr2 113514939 113515192 -139741391 + L2 LINE L2 3063 3313 0 221 338 211 23 chr2 113717848 113718722 -139537861 + L2 LINE L2 1931 2968 -346 1160 150 7 1 chr2 113718965 113719965 -139536618 + ALR/Alpha Satellite centromeric 1 1006 -21 1164 147 9 0 chr2 113720351 113721423 -139535160 + ALR/Alpha Satellite centromeric 1 1082 -19 1132 179 5 0 chr2 113721691 113722567 -139534016 + ALR/Alpha Satellite centromeric 1 879 0 8074 32 1 1 chr2 113722725 113724209 -139532374 + L1PA4 LINE L1 4435 5919 -236 2597 110 5 3 chr2 113724209 113724581 -139532002 + L1PA11 LINE L1 5793 6167 -7 295 226 175 22 chr2 113724906 113725043 -139531540 + MLT1L LTR MaLR 378 535 -80 378 229 83 131 chr2 113726087 113726424 -139530159 + HAL1 LINE L1 763 1083 -1424 1909 104 96 4 chr2 113726432 113726702 -139529881 + AluSx SINE Alu 1 295 -17 459 204 0 10 chr2 113726796 113726894 -139529689 + AluJb SINE Alu 180 276 -36 466 254 91 46 chr2 113726926 113727123 -139529460 + HAL1 LINE L1 1156 1361 -1146 2367 79 7 0 chr2 113727253 113727545 -139529038 + AluY SINE Alu 1 294 -17 2053 134 3 0 chr2 113727559 113727851 -139528732 + AluSx SINE Alu 1 293 -19 240 260 13 0 chr2 113728850 113728927 -139527656 - L1MC4a LINE L1 -1 7807 7730 1634 185 33 31 chr2 113729061 113729451 -139527132 - L1ME2 LINE L1 -8 6156 5766 1522 132 0 5 chr2 113729650 113729863 -139526720 - AluSx SINE Alu -100 212 1 673 259 29 6 chr2 113731453 113731627 -139524956 - MER5B DNA MER1_type 0 178 1 1299 96 0 6 chr2 113731818 113731996 -139524587 - AluSg/x SINE Alu -2 308 132 2459 103 0 0 chr2 113732691 113733003 -139523580 - AluSx SINE Alu 0 312 1 436 172 178 70 chr2 113733445 113733602 -139522981 - MER5A DNA MER1_type 0 189 16 1498 218 149 68 chr2 113734046 113734725 -139521858 + L1ME3A LINE L1 5429 6162 -8 21 0 0 0 chr2 113735396 113735417 -139521166 + GC_rich Low_complexity Low_complexity 1 21 0 479 273 92 38 chr2 113736192 113736430 -139520153 + L1ME LINE L1 5468 5718 -403 822 164 0 0 chr2 113736546 113736674 -139519909 + FLAM_A SINE Alu 1 128 -5 3948 117 30 5 chr2 113737056 113737652 -139518931 - L1PA16 LINE L1 -9 6157 5547 5795 83 3 4 chr2 113737753 113738521 -139518062 + L1PA8 LINE L1 5405 6171 -1 189 161 11 54 chr2 113738596 113738689 -139517894 + (TA)n Simple_repeat Simple_repeat 2 90 0 42 20 0 0 chr2 113739416 113739465 -139517118 + AT_rich Low_complexity Low_complexity 1 49 0 2777 211 120 25 chr2 113740073 113740879 -139515704 + L1M4 LINE L1 4045 4927 -1219 2091 129 0 32 chr2 113741515 113741825 -139514758 - AluSx SINE Alu -12 300 1 309 221 58 0 chr2 113741994 113742098 -139514485 + MER69 DNA AcHobo 2311 2420 -106 274 255 166 41 chr2 113742118 113742263 -139514320 - L2 LINE L2 -5 3308 3146 810 303 33 10 chr2 113742299 113742603 -139513980 + L1MEc LINE L1 240 550 -6013 671 300 131 14 chr2 113742598 113742965 -139513618 + L1MEc LINE L1 1203 1612 -4772 * 1150 198 32 0 chr2 113742969 113743186 -139513397 - LTR47A LTR ERVL 0 452 229 674 156 0 0 chr2 113743222 113743331 -139513252 - LTR47A LTR ERVL -343 109 1 3938 81 47 57 chr2 113743333 113743777 -139512806 + LTR66 LTR ERVL 1 439 -171 258 32 0 0 chr2 113743777 113743808 -139512775 + (TA)n Simple_repeat Simple_repeat 2 32 0 3938 81 47 57 chr2 113743808 113743979 -139512604 + LTR66 LTR ERVL 439 610 0 564 314 74 34 chr2 113743992 113744288 -139512295 + L2 LINE L2 2566 2873 -441 1676 201 7 0 chr2 113744305 113744593 -139511990 - AluJb SINE Alu -22 290 1 182 258 0 91 chr2 113744893 113744959 -139511624 + L2 LINE L2 3213 3272 0 4891 113 19 32 chr2 113745455 113746317 -139510266 - HERVH LTR ERV1 -6939 774 1 3226 125 5 2 chr2 113746319 113746766 -139509817 - LTR7 LTR ERV1 -2 448 1 218 239 16 0 chr2 113747652 113747713 -139508870 - MIR SINE MIR -55 153 91 981 281 49 32 chr2 113747789 113748194 -139508389 - L2 LINE L2 -11 3302 2891 993 227 29 29 chr2 113748264 113748291 -139508292 - L2 LINE L2 -564 2750 2724 2450 167 26 15 chr2 113748291 113748747 -139507836 - MER65C LTR ERV1 0 461 1 993 227 29 29 chr2 113748747 113748996 -139507587 - L2 LINE L2 -589 2725 2474 263 216 233 9 chr2 113749119 113749235 -139507348 + L2 LINE L2 3171 3312 -1 4066 189 62 23 chr2 113749413 113749431 -139507152 + MER21B LTR ERV1 1 17 -846 285 29 0 0 chr2 113749431 113749465 -139507118 + (TG)n Simple_repeat Simple_repeat 1 34 0 4066 189 62 23 chr2 113749465 113750243 -139506340 + MER21B LTR ERV1 17 828 -35 2577 191 76 12 chr2 113750311 113750687 -139505896 - MLT1E LTR MaLR -22 571 152 2791 84 14 0 chr2 113750687 113751046 -139505537 + THE1B LTR MaLR 1 364 0 2577 191 76 12 chr2 113751046 113751183 -139505400 - MLT1E LTR MaLR -441 152 25 458 162 191 9 chr2 113751283 113751388 -139505195 + MER3 DNA MER1_type 46 122 -87 * 1554 204 24 8 chr2 113751387 113751759 -139504824 + MER3 DNA MER1_type 2233 2610 0 272 248 157 8 chr2 113752751 113752872 -139503711 + MIR3 SINE MIR 2 140 -68 29 0 0 0 chr2 113753026 113753055 -139503528 + AT_rich Low_complexity Low_complexity 1 29 0 1182 140 5 39 chr2 113753349 113753556 -139503027 + AluJb SINE Alu 15 214 -98 33815 56 2 0 chr2 113753661 113757836 -139498747 - L1P LINE L1 -1960 4186 2 891 149 170 9 chr2 113757836 113758109 -139498474 - L1P5 LINE L1 -627 6967 6620 5578 139 58 49 chr2 113758109 113759245 -139497338 + pTR5 LTR ERV1 118 277 -437 354 163 64 82 chr2 113759245 113759356 -139497227 + LTR30 LTR ERV1 375 642 -80 2428 86 0 0 chr2 113759356 113759670 -139496913 + pTR5 LTR ERV1 79 392 -2046 13597 149 16 4 chr2 113759671 113761994 -139494589 - L1P5 LINE L1 -961 6623 4273 222 37 0 0 chr2 113761996 113762023 -139494560 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 8890 218 31 35 chr2 113764870 113765226 -139491357 - L1P5 LINE L1 -3310 4274 3918 3547 104 12 8 chr2 113765226 113765735 -139490848 - MER9 LTR ERVK 0 511 1 8890 218 31 35 chr2 113765735 113767253 -139489330 - L1P5 LINE L1 -3666 3918 2396 183 100 0 0 chr2 113767253 113767283 -139489300 + (TTG)n Simple_repeat Simple_repeat 2 31 0 8890 218 31 35 chr2 113767283 113768337 -139488246 - L1P5 LINE L1 -5188 2396 9 207 0 0 0 chr2 113768394 113768417 -139488166 + (A)n Simple_repeat Simple_repeat 1 23 0 326 176 44 0 chr2 113768760 113768828 -139487755 + MIR SINE MIR 168 238 -24 292 255 61 20 chr2 113768865 113768963 -139487620 - MIR3 SINE MIR -3 205 104 222 328 99 23 chr2 113769754 113769885 -139486698 - L3 LINE CR1 -3 1574 1434 264 267 77 23 chr2 113769912 113770042 -139486541 - MIR SINE MIR -67 141 13 1878 138 17 17 chr2 113770825 113771121 -139485462 + AluJo SINE Alu 1 296 -16 1396 157 4 4 chr2 113771204 113771440 -139485143 - MER46A DNA MER2_type 0 236 1 363 299 76 70 chr2 113771595 113772596 -139483987 + L1ME LINE L1 59 1057 -5339 2011 262 72 27 chr2 113772693 113773667 -139482916 + L1MCa LINE L1 895 2131 -4476 3182 200 25 16 chr2 113773667 113774313 -139482270 + MER82 DNA MER2_type 1 652 -1 2011 262 72 27 chr2 113774313 113774475 -139482108 + L1MCa LINE L1 2131 2284 -4323 1876 241 110 43 chr2 113774579 113774686 -139481897 + L1MCa LINE L1 3035 3133 -3293 2098 93 69 0 chr2 113774686 113774975 -139481608 + AluSc SINE Alu 1 309 0 1876 241 110 43 chr2 113774975 113775118 -139481465 + L1MCa LINE L1 3133 3265 -3161 1653 180 16 10 chr2 113775118 113775424 -139481159 - AluJb SINE Alu -4 308 1 1876 241 110 43 chr2 113775424 113776236 -139480347 + L1MCa LINE L1 3265 4169 -2257 430 176 76 84 chr2 113776573 113776692 -139479891 + L2 LINE L2 3196 3313 0 438 269 156 14 chr2 113777316 113777457 -139479126 - MIR SINE MIR -89 173 13 306 313 0 0 chr2 113777779 113777875 -139478708 + GA-rich Low_complexity Low_complexity 1 96 0 445 307 32 43 chr2 113778643 113778920 -139477663 - MARNA DNA Mariner -202 384 111 376 141 16 0 chr2 113779758 113779822 -139476761 - MER33 DNA MER1_type 0 324 260 2558 208 65 66 chr2 113779846 113780650 -139475933 - MER21B LTR ERV1 -60 803 1 884 174 82 14 chr2 113780657 113780924 -139475659 - MER33 DNA MER1_type -69 255 1 488 323 116 29 chr2 113781000 113781449 -139475134 - MLT1J LTR MaLR -11 500 13 683 271 42 28 chr2 113781471 113781827 -139474756 - L1ME LINE L1 -434 5687 5326 560 166 102 6 chr2 113781817 113781974 -139474609 - L1MA4A LINE L1 -3 6300 6129 * 22 35 0 0 chr2 113782751 113782780 -139473803 + AT_rich Low_complexity Low_complexity 1 29 0 1914 162 3 10 chr2 113783425 113783721 -139472862 + AluJb SINE Alu 1 294 -18 2149 120 0 0 chr2 113783805 113784097 -139472486 + AluSx SINE Alu 5 296 -16 488 335 49 34 chr2 113784833 113785182 -139471401 + L2 LINE L2 1476 1829 -1485 534 268 136 51 chr2 113785291 113785645 -139470938 + L2 LINE L2 2930 3313 0 563 253 73 7 chr2 113786407 113786557 -139470026 + MIR SINE MIR 103 262 0 213 39 0 0 chr2 113786565 113786591 -139469992 + (TAG)n Simple_repeat Simple_repeat 1 26 0 1821 171 3 0 chr2 113786591 113786877 -139469706 - AluJo SINE Alu -25 287 1 3348 244 22 36 chr2 113787794 113788933 -139467650 + L1M3 LINE L1 2971 4093 -2053 382 216 28 17 chr2 113788938 113789084 -139467499 + L1M3 LINE L1 5293 5442 -726 257 277 0 21 chr2 113789084 113789178 -139467405 + L1MEc LINE L1 2319 2410 -3986 1886 250 14 32 chr2 113789193 113789846 -139466737 + L1MEc LINE L1 2462 3102 -3113 571 314 49 4 chr2 113789995 113790259 -139466324 - L2 LINE L2 -703 2611 2336 2389 87 0 0 chr2 113790687 113790987 -139465596 + AluSc SINE Alu 1 300 -9 607 217 14 0 chr2 113791051 113791189 -139465394 + L1ME LINE L1 11 150 -5920 337 253 0 12 chr2 113791189 113791272 -139465311 - L1MDa LINE L1 -4017 2523 2442 1423 138 47 24 chr2 113791272 113791526 -139465057 - THE1B LTR MaLR 0 364 105 1137 108 0 42 chr2 113791526 113791692 -139464891 + AluSg/x SINE Alu 143 301 -11 746 149 0 0 chr2 113791692 113791806 -139464777 - THE1B LTR MaLR -250 114 1 11843 87 4 4 chr2 113791806 113793385 -139463198 - THE1B-int LTR MaLR 0 1580 1 2221 137 34 17 chr2 113793385 113793743 -139462840 - THE1B LTR MaLR 0 364 1 3256 172 88 23 chr2 113793743 113793765 -139462818 - L1MDa LINE L1 -4094 2446 2427 2163 128 0 3 chr2 113793765 113794062 -139462521 - AluSq SINE Alu -17 296 1 3256 172 88 23 chr2 113794062 113794869 -139461714 - L1MDa LINE L1 -4113 2427 1563 662 198 9 0 chr2 113795472 113795588 -139460995 - FLAM_A SINE Alu -16 117 1 281 250 152 11 chr2 113795685 113795777 -139460806 + MIR3 SINE MIR 81 185 -23 22 56 0 0 chr2 113796260 113796296 -139460287 + AT_rich Low_complexity Low_complexity 1 36 0 2041 156 0 7 chr2 113796573 113796880 -139459703 - AluSx SINE Alu -7 305 1 717 128 0 0 chr2 113796992 113797101 -139459482 + AluSg/x SINE Alu 193 301 -9 329 270 36 27 chr2 113798492 113798603 -139457980 - MIR SINE MIR 0 262 151 2311 146 62 0 chr2 113799162 113799565 -139457018 - MSTA LTR MaLR 0 428 1 494 299 71 22 chr2 113801518 113801702 -139454881 + MIR SINE MIR 7 199 -63 394 217 35 0 chr2 113801822 113801937 -139454646 - L1MDa LINE L1 -6421 119 1 1943 151 3 10 chr2 113802055 113802367 -139454216 + AluJb SINE Alu 1 310 -2 24 0 0 0 chr2 113802671 113802695 -139453888 + AT_rich Low_complexity Low_complexity 1 24 0 234 229 71 14 chr2 113803444 113803514 -139453069 - L1ME LINE L1 -491 5630 5557 300 257 54 0 chr2 113803538 113803612 -139452971 - L2 LINE L2 -42 3230 3153 811 159 13 0 chr2 113804410 113804567 -139452016 - L1ME1 LINE L1 -5 6397 6239 2504 186 20 47 chr2 113804673 113804864 -139451719 - L1ME1 LINE L1 -177 6225 6030 1436 119 151 90 chr2 113804864 113805095 -139451488 + MER47A DNA MER2_type 1 261 -2062 1863 145 3 36 chr2 113805095 113805399 -139451184 + AluJo SINE Alu 1 294 -18 1436 119 151 90 chr2 113805399 113805512 -139451071 + MER47A DNA MER2_type 261 366 0 2504 186 20 47 chr2 113805512 113805741 -139450842 - L1ME1 LINE L1 -372 6030 5823 2349 76 0 13 chr2 113805741 113806056 -139450527 - AluY SINE Alu 0 311 1 2504 186 20 47 chr2 113806056 113806230 -139450353 - L1ME1 LINE L1 -579 5823 5646 498 292 5 64 chr2 113806252 113806471 -139450112 + MIR SINE MIR 57 262 0 258 32 0 0 chr2 113808512 113808543 -139448040 + (TG)n Simple_repeat Simple_repeat 2 32 0 13548 31 0 0 chr2 113809421 113811794 -139444789 - L1PA4 LINE L1 0 6155 3771 25 51 0 0 chr2 113812098 113812137 -139444446 + AT_rich Low_complexity Low_complexity 1 39 0 1929 53 0 0 chr2 113812243 113812470 -139444113 - AluY SINE Alu -2 309 83 6921 220 65 12 chr2 113812531 113814934 -139441649 - L1ME1 LINE L1 -1724 4658 2121 258 242 0 0 chr2 113814934 113815000 -139441583 - L1ME1 LINE L1 -4202 2182 2117 568 288 28 71 chr2 113815015 113815072 -139441511 - MIR SINE MIR -13 249 191 2004 155 3 0 chr2 113815072 113815375 -139441208 - AluSx SINE Alu -8 304 1 568 288 28 71 chr2 113815375 113815529 -139441054 - MIR SINE MIR -71 191 47 274 226 0 65 chr2 113816481 113816574 -139440009 + L1MC4 LINE L1 7955 8041 -1 576 321 77 52 chr2 113816710 113817112 -139439471 - L2 LINE L2 -6 3266 2855 1211 183 99 70 chr2 113817512 113817867 -139438716 + MLT1A1 LTR MaLR 1 365 0 365 197 53 0 chr2 113818965 113819041 -139437542 + MER116 DNA Mariner 1 80 0 233 214 29 86 chr2 113819825 113819895 -139436688 - L2 LINE L2 -4 3309 3244 286 281 58 41 chr2 113819933 113820054 -139436529 - MIR3 SINE MIR -28 180 58 358 250 20 92 chr2 113820172 113820324 -139436259 + L1ME4a LINE L1 5941 6081 -40 616 259 61 96 chr2 113820421 113820734 -139435849 - MLT1I LTR MaLR -69 340 39 522 81 27 0 chr2 113820933 113821007 -139435576 - MADE1 DNA Mariner 0 80 5 898 256 37 9 chr2 113822585 113822800 -139433783 - MER58A DNA MER1_type 0 224 4 33 73 0 0 chr2 113824087 113824155 -139432428 + AT_rich Low_complexity Low_complexity 1 68 0 403 167 0 11 chr2 113824272 113824362 -139432221 + L1M4 LINE L1 5186 5274 -872 659 246 131 0 chr2 113824666 113824849 -139431734 - MIR SINE MIR 0 262 56 2311 100 36 0 chr2 113825146 113825447 -139431136 + AluSq SINE Alu 1 312 -1 188 89 89 0 chr2 113825878 113825934 -139430649 + (TTTA)n Simple_repeat Simple_repeat 4 64 0 1560 181 72 14 chr2 113825953 113826292 -139430291 - AluJb SINE Alu 0 356 1 395 298 113 7 chr2 113827519 113827660 -139428923 - L2 LINE L2 -2 3311 3156 1487 160 103 4 chr2 113827985 113828248 -139428335 + AluJb SINE Alu 1 289 -23 227 269 15 0 chr2 113828922 113828989 -139427594 + MLT1K LTR MaLR 2 69 -519 449 313 28 61 chr2 113829337 113829551 -139427032 - L2 LINE L2 -1 3312 3106 426 347 51 48 chr2 113829565 113829899 -139426684 + L1MDa LINE L1 28 362 -6178 182 37 37 0 chr2 113829902 113829929 -139426654 + (TTTG)n Simple_repeat Simple_repeat 3 30 0 288 0 0 0 chr2 113830090 113830122 -139426461 + (TC)n Simple_repeat Simple_repeat 1 32 0 * 342 0 0 0 chr2 113830121 113830159 -139426424 + (CA)n Simple_repeat Simple_repeat 1 38 0 318 248 119 20 chr2 113831401 113831502 -139425081 + MIR SINE MIR 31 141 -67 1045 263 110 0 chr2 113833813 113834132 -139422451 - L1MD3 LINE L1 -13 7982 7629 15163 191 27 11 chr2 113834155 113834280 -139422303 - L1PB1 LINE L1 -2 6865 6743 2517 46 16 13 chr2 113834280 113834585 -139421998 - AluY SINE Alu -5 306 1 15163 191 27 11 chr2 113834585 113834827 -139421756 - L1PB1 LINE L1 -124 6743 6506 303 71 0 0 chr2 113834827 113834869 -139421714 + (TA)n Simple_repeat Simple_repeat 2 43 0 15163 191 27 11 chr2 113834869 113840469 -139416114 - L1PB1 LINE L1 -361 6506 650 249 288 0 0 chr2 113840465 113840538 -139416045 - L1MD2 LINE L1 -90 6269 6197 * 2051 231 42 37 chr2 113840548 113841141 -139415442 - L1MD2 LINE L1 -236 6123 5528 410 319 48 29 chr2 113842530 113842740 -139413843 + MIR SINE MIR 34 247 -15 328 263 102 51 chr2 113843205 113843342 -139413241 - L2 LINE L2 -8 3305 3162 379 225 70 14 chr2 113843354 113843496 -139413087 - LTR33A LTR ERVL 0 523 374 391 312 127 9 chr2 113845235 113845456 -139411127 - L2 LINE L2 -17 3255 3009 347 303 13 78 chr2 113847088 113847238 -139409345 + MER112 DNA MER1_type 29 160 -100 1541 175 34 38 chr2 113847238 113847529 -139409054 - AluJo SINE Alu -18 294 5 347 303 13 78 chr2 113847529 113847609 -139408974 + MER112 DNA MER1_type 160 244 -16 286 280 37 0 chr2 113848169 113848276 -139408307 + L1MC/D LINE L1 5687 5797 -2011 1172 187 36 32 chr2 113848298 113848549 -139408034 - MER82 DNA MER2_type 0 653 402 1882 149 40 0 chr2 113848711 113849007 -139407576 - AluJb SINE Alu -4 308 1 3005 137 35 4 chr2 113849032 113849521 -139407062 + L1MB3 LINE L1 5673 6176 -7 602 299 131 17 chr2 113850487 113850622 -139405961 - L1MC4a LINE L1 -1834 5974 5856 186 71 0 0 chr2 113850622 113850650 -139405933 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 602 299 131 17 chr2 113850650 113850872 -139405711 - L1MC4a LINE L1 -1952 5856 5576 297 0 0 0 chr2 113850987 113851020 -139405563 + (TG)n Simple_repeat Simple_repeat 2 34 0 273 266 122 65 chr2 113851273 113851412 -139405171 - MIR SINE MIR -69 193 47 681 208 102 78 chr2 113851690 113851974 -139404609 - L1MC5 LINE L1 -924 7037 6747 241 297 27 0 chr2 113853098 113853172 -139403411 + MIR SINE MIR 152 227 -35 182 254 68 17 chr2 113853412 113853471 -139403112 - MIR SINE MIR -2 260 199 1911 166 7 10 chr2 113854068 113854364 -139402219 + AluJo SINE Alu 1 295 -17 257 322 28 14 chr2 113854429 113854572 -139402011 + L1MEc LINE L1 769 913 -5292 * 307 288 41 46 chr2 113854540 113854762 -139401821 + L1MEc LINE L1 1362 1613 -963 333 0 0 0 chr2 113854991 113855028 -139401555 + (TTA)n Simple_repeat Simple_repeat 3 39 0 624 27 0 0 chr2 113855028 113855102 -139401481 - L1PA4 LINE L1 -18 6137 6064 625 315 89 17 chr2 113855107 113855415 -139401168 + L1M4 LINE L1 5083 5418 -751 571 294 40 51 chr2 113855480 113855756 -139400827 - Charlie8 DNA MER1_type -2144 273 1 306 213 40 27 chr2 113856509 113856584 -139399999 + L1MEc LINE L1 1771 1846 -4369 * 339 303 41 33 chr2 113856541 113856663 -139399920 - L1ME4a LINE L1 -157 5964 5842 384 267 83 11 chr2 113856708 113856888 -139399695 - L1MC5 LINE L1 -60 7901 7709 402 214 34 0 chr2 113856960 113857049 -139399534 - Tigger7 DNA MER2_type 0 2587 2496 * 2572 178 36 0 chr2 113857048 113857515 -139399068 - Tigger7 DNA MER2_type -1965 522 39 1814 152 70 14 chr2 113857575 113857930 -139398653 - THE1C LTR MaLR 0 375 1 9057 146 17 32 chr2 113857935 113859532 -139397051 - THE1C-int LTR MaLR -5 1575 3 1982 121 84 31 chr2 113859534 113859890 -139396693 - THE1C LTR MaLR 0 375 1 198 333 48 32 chr2 113860331 113860457 -139396126 + L2 LINE L2 2624 2751 -563 454 287 55 33 chr2 113860859 113861040 -139395543 + L2 LINE L2 3127 3311 -2 2502 64 0 3 chr2 113862433 113862745 -139393838 - AluY SINE Alu 0 311 1 206 214 0 0 chr2 113862885 113862927 -139393656 + C-rich Low_complexity Low_complexity 5 46 0 198 0 0 0 chr2 113863706 113863728 -139392855 + (T)n Simple_repeat Simple_repeat 1 22 0 244 185 19 0 chr2 113864079 113864133 -139392450 - MLT1K LTR MaLR -18 570 516 8436 63 9 10 chr2 113864463 113865535 -139391048 - MER11C LTR ERVK 0 1071 1 394 307 82 17 chr2 113867057 113867288 -139389295 - LTR16A LTR ERVL -6 444 199 279 0 0 0 chr2 113868223 113868254 -139388329 + (CTGTG)n Simple_repeat Simple_repeat 3 33 0 1533 200 83 21 chr2 113868787 113869005 -139387578 - LTR56 LTR ERV1 0 445 242 2178 114 13 3 chr2 113869005 113869311 -139387272 + AluSx SINE Alu 1 309 -3 1533 200 83 21 chr2 113869311 113869525 -139387058 - LTR56 LTR ERV1 -203 242 9 2207 192 24 161 chr2 113869829 113870700 -139385883 + MER21B LTR ERV1 52 803 -60 1634 209 46 35 chr2 113871191 113871559 -139385024 + MLT1A2 LTR MaLR 2 373 -1 10918 25 0 0 chr2 113871777 113873805 -139382778 - L1PA3 LINE L1 -3 6152 4124 13116 31 2 5 chr2 113873805 113875461 -139381122 + L1PA3 LINE L1 2473 4124 -2022 182 311 54 0 chr2 113876150 113876224 -139380359 + MIR3 SINE MIR 107 184 -24 1649 167 34 0 chr2 113876323 113876617 -139379966 - AluJo SINE Alu -4 308 5 23783 95 9 11 chr2 113877462 113881008 -139375575 - L1P LINE L1 -2597 3549 11 260 241 19 0 chr2 113881028 113881082 -139375501 + MER5B DNA MER1_type 124 178 0 1813 171 27 0 chr2 113881124 113881423 -139375160 - AluJb SINE Alu -1 311 5 2593 68 0 0 chr2 113881838 113882149 -139374434 + AluY SINE Alu 1 311 0 558 182 0 0 chr2 113882334 113882433 -139374150 - Tigger7 DNA MER2_type 0 2491 2393 * 1410 165 11 37 chr2 113882431 113882704 -139373879 - Tigger7 DNA MER2_type -284 266 1 366 330 39 6 chr2 113883294 113883476 -139373107 + Charlie8 DNA MER1_type 4 191 -2226 815 217 75 75 chr2 113883541 113883928 -139372655 - MLT1H LTR MaLR -154 395 9 372 249 71 47 chr2 113884281 113884450 -139372133 + MER5B DNA MER1_type 5 177 -1 970 184 0 0 chr2 113884954 113885117 -139371466 - FRAM SINE Alu 0 166 4 193 77 0 0 chr2 113885355 113885381 -139371202 - L2 LINE L2 -38 3234 3209 206 298 155 54 chr2 113886479 113886647 -139369936 + MIR SINE MIR 16 200 -62 366 260 0 19 chr2 113886827 113886931 -139369652 - Charlie8 DNA MER1_type -2244 173 72 363 123 18 0 chr2 113887129 113887186 -139369397 + AluJo SINE Alu 1 58 -244 1518 177 126 64 chr2 113887186 113887638 -139368945 + LTR12 LTR ERV1 1 480 -234 814 222 68 4 chr2 113887640 113887874 -139368709 + AluJo SINE Alu 56 304 -8 647 242 55 36 chr2 113887920 113888358 -139368225 + MLT1E2 LTR MaLR 3 624 0 212 299 61 100 chr2 113888494 113888725 -139367858 + L2 LINE L2 3019 3240 -32 4505 131 7 27 chr2 113888812 113889552 -139367031 - L1PB2 LINE L1 -9 6142 5418 405 338 28 0 chr2 113889698 113889840 -139366743 + MIR3 SINE MIR 60 205 -3 207 0 0 0 chr2 113890199 113890222 -139366361 + (TG)n Simple_repeat Simple_repeat 2 24 0 5370 66 9 0 chr2 113891647 113892331 -139364252 - L1PA8 LINE L1 0 6172 5483 2280 133 0 0 chr2 113892332 113892663 -139363920 - L1P3 LINE L1 -6125 336 6 242 268 14 92 chr2 113892908 113893050 -139363533 + MLT1K LTR MaLR 401 531 -57 665 174 16 0 chr2 113894191 113894312 -139362271 - LTR19B LTR ERV1 0 580 458 241 297 27 0 chr2 113894901 113894975 -139361608 + MIR SINE MIR 152 227 -35 182 254 68 17 chr2 113895215 113895274 -139361309 - MIR SINE MIR -2 260 199 1937 162 7 10 chr2 113895871 113896167 -139360416 + AluJo SINE Alu 1 295 -17 257 322 28 14 chr2 113896232 113896375 -139360208 + L1MEc LINE L1 769 913 -5292 * 290 293 41 46 chr2 113896343 113896565 -139360018 + L1MEc LINE L1 1362 1613 -963 306 0 0 0 chr2 113896794 113896828 -139359755 + (TTA)n Simple_repeat Simple_repeat 3 36 0 624 27 0 0 chr2 113896828 113896902 -139359681 - L1PA4 LINE L1 -18 6137 6064 625 315 89 17 chr2 113896907 113897215 -139359368 + L1M4 LINE L1 5083 5418 -751 571 294 40 51 chr2 113897280 113897556 -139359027 - Charlie8 DNA MER1_type -2144 273 1 321 247 25 25 chr2 113898313 113898394 -139358189 + L1MC4 LINE L1 6640 6720 -1322 * 331 277 8 62 chr2 113898329 113898459 -139358124 - L1ME4a LINE L1 -157 5964 5842 384 267 83 11 chr2 113898504 113898684 -139357899 - L1MC5 LINE L1 -60 7901 7709 389 225 34 0 chr2 113898756 113898845 -139357738 - Tigger7 DNA MER2_type 0 2491 2400 * 2547 180 36 0 chr2 113898844 113899310 -139357273 - Tigger7 DNA MER2_type -212 521 39 1869 143 70 17 chr2 113899370 113899726 -139356857 - THE1C LTR MaLR 0 375 1 9058 145 17 32 chr2 113899731 113901328 -139355255 - THE1C-int LTR MaLR -5 1575 3 1982 121 84 31 chr2 113901330 113901686 -139354897 - THE1C LTR MaLR 0 375 1 198 333 48 32 chr2 113902129 113902255 -139354328 + L2 LINE L2 2624 2751 -563 432 293 55 33 chr2 113902657 113902838 -139353745 + L2 LINE L2 3127 3311 -2 2517 64 0 3 chr2 113904231 113904543 -139352040 - AluY SINE Alu 0 311 1 206 214 0 0 chr2 113904683 113904725 -139351858 + C-rich Low_complexity Low_complexity 5 46 0 207 0 0 0 chr2 113905508 113905531 -139351052 + (T)n Simple_repeat Simple_repeat 1 23 0 244 185 19 0 chr2 113905882 113905936 -139350647 - MLT1K LTR MaLR -18 570 516 8420 64 9 10 chr2 113906266 113907338 -139349245 - MER11C LTR ERVK 0 1071 1 394 307 82 17 chr2 113908861 113909092 -139347491 - LTR16A LTR ERVL -6 444 199 324 0 0 0 chr2 113910027 113910063 -139346520 + (CTGTG)n Simple_repeat Simple_repeat 3 38 0 1533 200 83 21 chr2 113910597 113910815 -139345768 - LTR56 LTR ERV1 0 445 242 2195 112 13 3 chr2 113910815 113911120 -139345463 + AluSx SINE Alu 1 308 -4 1533 200 83 21 chr2 113911120 113911334 -139345249 - LTR56 LTR ERV1 -203 242 9 2670 223 27 58 chr2 113911638 113912079 -139344504 + MER21B LTR ERV1 52 460 -403 414 219 10 0 chr2 113912079 113912175 -139344408 - L1PB2 LINE L1 -2 6149 6053 2670 223 27 58 chr2 113912175 113912509 -139344074 + MER21B LTR ERV1 460 803 -60 1634 209 46 35 chr2 113913000 113913368 -139343215 + MLT1A2 LTR MaLR 2 373 -1 10894 26 0 0 chr2 113913586 113915614 -139340969 - L1PA3 LINE L1 -3 6152 4124 13156 29 2 5 chr2 113915614 113917270 -139339313 + L1PA3 LINE L1 2473 4124 -2022 182 311 54 0 chr2 113917961 113918035 -139338548 + MIR3 SINE MIR 107 184 -24 1613 174 34 0 chr2 113918134 113918428 -139338155 - AluJo SINE Alu -4 308 5 231 352 74 0 chr2 113919692 113919800 -139336783 - L2 LINE L2 -21 3251 3136 333 0 0 0 chr2 113920910 113920947 -139335636 + (A)n Simple_repeat Simple_repeat 1 37 0 22 0 0 0 chr2 113921506 113921528 -139335055 + AT_rich Low_complexity Low_complexity 1 22 0 1652 191 7 3 chr2 113922246 113922545 -139334038 + AluJo SINE Alu 1 300 -12 2139 193 27 66 chr2 113922582 113923125 -139333458 + L1MD1 LINE L1 4333 4896 -1346 1922 135 81 35 chr2 113923125 113923473 -139333110 - THE1B LTR MaLR 0 364 1 2139 193 27 66 chr2 113923473 113923510 -139333073 + L1MD1 LINE L1 4896 4933 -1309 2442 66 0 0 chr2 113923510 113923812 -139332771 + AluY SINE Alu 1 302 -9 2139 193 27 66 chr2 113923812 113924708 -139331875 + L1MD1 LINE L1 4933 5884 -358 1915 106 0 84 chr2 113924708 113924858 -139331725 + AluSg SINE Alu 1 112 -198 9336 59 80 2 chr2 113924858 113926155 -139330428 + SVA Other Other 17 1410 0 1915 106 0 84 chr2 113926155 113926325 -139330258 + AluSg SINE Alu 112 295 -15 2139 193 27 66 chr2 113926325 113926510 -139330073 + L1MD1 LINE L1 5884 6075 -167 408 138 0 50 chr2 113926510 113926590 -139329993 - FAM SINE Alu 0 185 110 2135 126 0 0 chr2 113928394 113928704 -139327879 + AluSx SINE Alu 1 310 -2 265 351 33 7 chr2 113929398 113929549 -139327034 - HERV3 LTR ERV1 -3864 4562 4408 1851 224 131 72 chr2 113929611 113930304 -139326279 + MER50 LTR ERV1 1 734 0 3212 133 11 7 chr2 113931328 113932164 -139324419 + LTR17 LTR ERV1 1 731 -49 2298 149 29 49 chr2 113932336 113932495 -139324088 + LTR56 LTR ERV1 3 164 -281 5875 128 17 21 chr2 113932495 113933454 -139323129 - LTR5 LTR ERVK -14 955 1 2298 149 29 49 chr2 113933454 113933744 -139322839 + LTR56 LTR ERV1 164 443 -2 216 0 0 0 chr2 113933814 113933838 -139322745 + (T)n Simple_repeat Simple_repeat 1 24 0 3649 58 41 0 chr2 113933943 113934428 -139322155 - LTR10D LTR ERV1 0 513 9 238 341 22 0 chr2 113934488 113934579 -139322004 - LTR23 LTR ERV1 -13 424 332 1619 214 60 8 chr2 113935005 113935402 -139321181 + MER63C DNA MER1_type 1 418 -512 189 0 0 0 chr2 113935840 113935861 -139320722 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 240 253 11 46 chr2 113936034 113936121 -139320462 - MER5B DNA MER1_type -90 88 5 1992 163 58 3 chr2 113936344 113936669 -139319914 + MER61A LTR ERV1 1 343 0 623 190 11 11 chr2 113936679 113936858 -139319725 + (CAT)n Simple_repeat Simple_repeat 1 179 0 207 0 0 0 chr2 113936952 113936975 -139319608 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 288 266 38 0 chr2 113937836 113937915 -139318668 + MIR3 SINE MIR 78 159 -49 474 269 60 50 chr2 113938139 113938340 -139318243 - L2 LINE L2 -2 3311 3109 247 345 68 7 chr2 113939107 113939255 -139317328 - MIR SINE MIR -70 192 36 423 0 0 0 chr2 113940076 113940123 -139316460 + (TG)n Simple_repeat Simple_repeat 2 48 0 465 243 61 27 chr2 113940158 113940306 -139316277 - MIR SINE MIR -97 165 13 233 293 94 28 chr2 113940562 113940668 -139315915 + MIR3 SINE MIR 86 198 -10 3281 260 71 24 chr2 113943207 113943463 -139313120 - L1M4 LINE L1 -1680 4466 4223 2122 120 6 16 chr2 113943463 113943779 -139312804 - AluSp SINE Alu 0 313 1 3281 260 71 24 chr2 113943779 113945129 -139311454 - L1M4 LINE L1 -1923 4223 2735 294 276 217 26 chr2 113945130 113945282 -139311301 + MIR SINE MIR 79 259 -3 190 296 0 62 chr2 113947565 113947646 -139308937 + L3b LINE CR1 1163 1238 -345 272 315 36 18 chr2 113947747 113947858 -139308725 + MIR3 SINE MIR 15 127 -81 1426 167 29 0 chr2 113950315 113950560 -139306023 + AluJo SINE Alu 46 297 -15 322 39 0 0 chr2 113950985 113951036 -139305547 + AluSp/q SINE Alu 253 303 0 3258 161 46 25 chr2 113951038 113951673 -139304910 - LTR39 LTR ERV1 -135 648 1 221 219 0 0 chr2 113952312 113952353 -139304230 + G-rich Low_complexity Low_complexity 2 42 0 206 224 20 0 chr2 113953977 113954026 -139302557 + G-rich Low_complexity Low_complexity 1 50 0 221 204 68 0 chr2 113955082 113955170 -139301413 + (ATTG)n Simple_repeat Simple_repeat 3 96 0 385 130 2 103 chr2 113962795 113963284 -139293299 + (CAGCT)n Simple_repeat Simple_repeat 1 439 0 720 223 32 27 chr2 113965617 113965805 -139290778 + MER53 DNA DNA 1 189 0 927 260 21 13 chr2 113967727 113967962 -139288621 - MIR SINE MIR -20 242 6 1952 211 2 37 chr2 113968330 113968733 -139287850 - MLT1B LTR MaLR 0 390 2 916 280 96 18 chr2 113968867 113969431 -139287152 - L1M4 LINE L1 -1150 4996 4389 14715 22 1 0 chr2 113969498 113971958 -139284625 - L1PA3 LINE L1 0 6155 3695 664 148 148 85 chr2 113971959 113972195 -139284388 + LTR49-int LTR ERV1 2226 2476 -4282 398 243 72 40 chr2 113972286 113972438 -139284145 + LTR49-int LTR ERV1 4181 4337 -2339 508 172 0 82 chr2 113972537 113972653 -139283930 + LTR49-int LTR ERV1 3730 3835 -2763 2355 156 38 19 chr2 113972653 113973071 -139283512 - MSTB LTR MaLR 0 426 1 508 172 0 82 chr2 113973071 113973088 -139283495 + LTR49-int LTR ERV1 3835 3852 -2746 635 263 92 59 chr2 113973109 113973866 -139282717 + LTR49-int LTR ERV1 2482 3212 -3073 1585 188 3 10 chr2 113973866 113974164 -139282419 + AluJo SINE Alu 7 302 -10 635 263 92 59 chr2 113974164 113974197 -139282386 + LTR49-int LTR ERV1 3212 4611 -1674 8318 228 32 29 chr2 113974418 113976806 -139279777 + L1 LINE L1 2568 4961 -1185 13912 194 18 35 chr2 113981857 113981996 -139274587 + L1P LINE L1 1861 2001 -4145 1837 167 3 0 chr2 113981996 113982307 -139274276 + AluJb SINE Alu 1 312 0 13912 194 18 35 chr2 113982307 113982534 -139274049 + L1P LINE L1 2001 2230 -3916 1445 213 7 0 chr2 113982534 113982816 -139273767 + AluJb SINE Alu 5 288 -24 198 0 0 0 chr2 113982820 113982842 -139273741 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 13912 194 18 35 chr2 113982842 113985061 -139271522 + L1P LINE L1 2233 4387 -1759 405 0 0 0 chr2 113985061 113985106 -139271477 + (CA)n Simple_repeat Simple_repeat 2 46 0 13912 194 18 35 chr2 113985106 113985745 -139270838 + L1P LINE L1 4387 5036 -1110 1489 164 4 22 chr2 113985745 113986019 -139270564 + AluJb SINE Alu 29 297 -15 342 200 209 0 chr2 113986019 113986115 -139270468 + L1MB5 LINE L1 6052 6173 -1 241 172 16 31 chr2 113986148 113986212 -139270371 + (TA)n Simple_repeat Simple_repeat 2 64 0 405 287 18 0 chr2 113986269 113986436 -139270147 + (TA)n Simple_repeat Simple_repeat 1 170 0 287 313 0 0 chr2 113986482 113986581 -139270002 + (TA)n Simple_repeat Simple_repeat 2 100 0 538 234 56 114 chr2 113986608 113987036 -139269547 + MER57A LTR ERV1 1 403 0 804 251 36 27 chr2 113987041 113987260 -139269323 + MER57A-int LTR ERV1 5 225 -7312 410 103 0 0 chr2 113987260 113987328 -139269255 + LTR54 LTR ERV1 441 508 -2 332 278 28 19 chr2 113987592 113987700 -139268883 + MER57A-int LTR ERV1 221 329 -7208 371 194 32 11 chr2 113988036 113988129 -139268454 + MER57A-int LTR ERV1 284 378 -4558 892 265 21 25 chr2 113989428 113989707 -139266876 + MER34C LTR ERV1 159 436 -149 2199 119 0 0 chr2 113990617 113990929 -139265654 - AluSq SINE Alu -1 312 1 428 226 89 16 chr2 113991705 113991829 -139264754 - MIR3 SINE MIR -41 167 35 196 292 101 0 chr2 113992407 113992496 -139264087 + L2 LINE L2 2960 3057 -215 1206 195 67 10 chr2 113993927 113994213 -139262370 - MLT1D LTR MaLR 0 505 216 252 352 28 14 chr2 113994464 113994609 -139261974 - MIR SINE MIR -113 149 3 265 321 84 38 chr2 113995390 113995521 -139261062 + MIR SINE MIR 48 184 -78 384 219 25 59 chr2 113995834 113995953 -139260630 + MLT2C1 LTR ERVL 2 116 -281 233 333 30 0 chr2 113995970 113996069 -139260514 + MLT2C1 LTR ERVL 237 338 -59 5031 163 23 29 chr2 113996085 113997008 -139259575 + MER49 LTR ERV1 5 921 -2 297 0 0 0 chr2 113997020 113997053 -139259530 + (CA)n Simple_repeat Simple_repeat 2 34 0 881 238 0 0 chr2 113997053 113997240 -139259343 + HERVL LTR ERVL 1003 1189 -4575 389 167 10 0 chr2 113997241 113997343 -139259240 + (CTTG)n Simple_repeat Simple_repeat 2 104 0 4401 246 56 3 chr2 113997349 113998432 -139258151 + HERVL LTR ERVL 1180 2320 -3444 1575 118 9 0 chr2 113998438 113998658 -139257925 + HERVL LTR ERVL 3983 4204 -1450 340 134 60 0 chr2 113998787 113998854 -139257729 + HERVL LTR ERVL 4455 4525 -1239 * 3291 162 17 12 chr2 113998849 113999424 -139257159 + HERVL LTR ERVL 4813 5390 -374 3707 217 37 7 chr2 113999425 113999836 -139256747 + L1MB8 LINE L1 4858 5255 -923 2283 87 0 3 chr2 113999836 114000136 -139256447 + AluSc SINE Alu 1 299 -10 213 39 0 0 chr2 114000136 114000162 -139256421 + (TA)n Simple_repeat Simple_repeat 2 27 0 3707 217 37 7 chr2 114000162 114001032 -139255551 + L1MB8 LINE L1 5254 6177 -1 237 65 0 0 chr2 114003214 114003245 -139253338 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 407 237 69 8 chr2 114003253 114003384 -139253199 + MLT1J1 LTR MaLR 72 210 -236 2055 116 0 3 chr2 114003608 114003909 -139252674 + AluSx SINE Alu 1 300 -12 2057 128 3 0 chr2 114003914 114004220 -139252363 + AluSq SINE Alu 1 307 -6 1599 135 95 4 chr2 114005527 114005801 -139250782 - AluSx SINE Alu -13 299 1 309 317 49 24 chr2 114007110 114007233 -139249350 + MLT1K LTR MaLR 21 146 -442 235 181 83 0 chr2 114007495 114007567 -139249016 - MIR3 SINE MIR -49 159 82 385 297 140 33 chr2 114008731 114009189 -139247394 - L2 LINE L2 0 3313 2807 568 253 124 91 chr2 114009273 114009756 -139246827 - MLT1E LTR MaLR -94 499 1 1538 68 10 5 chr2 114010268 114010473 -139246110 + AluY SINE Alu 105 310 -1 2301 259 50 22 chr2 114011201 114011895 -139244688 - MER21B LTR ERV1 -149 714 1 1234 170 9 19 chr2 114011970 114012182 -139244401 + MER2 DNA MER2_type 1 210 -135 26 0 0 0 chr2 114012182 114012208 -139244375 + AT_rich Low_complexity Low_complexity 1 26 0 1643 186 6 10 chr2 114012464 114012775 -139243808 + AluJb SINE Alu 3 312 0 189 0 0 0 chr2 114015381 114015402 -139241181 + (CA)n Simple_repeat Simple_repeat 2 22 0 403 338 28 0 chr2 114015761 114015903 -139240680 - MIR3 SINE MIR -3 205 60 4537 61 41 3 chr2 114016480 114017066 -139239517 + LTR14B LTR ERVK 1 608 0 676 227 124 18 chr2 114018245 114018470 -139238113 - MIR SINE MIR 0 262 14 6544 110 46 12 chr2 114018787 114019761 -139236822 - LTR13 LTR ERVK 0 1007 1 516 306 47 36 chr2 114020173 114020451 -139236132 - L1ME LINE L1 -328 5793 5513 2984 112 7 7 chr2 114020452 114020898 -139235685 + L1PA16 LINE L1 5719 6164 -2 397 277 93 56 chr2 114020903 114021269 -139235314 - L1ME LINE L1 -743 5403 5097 290 262 186 6 chr2 114022936 114023119 -139233464 + MLT1K LTR MaLR 159 374 -156 1150 225 42 21 chr2 114023185 114023440 -139233143 - MER58B DNA MER1_type -1 340 80 2050 143 53 18 chr2 114023440 114023782 -139232801 - MLT1A1 LTR MaLR 0 365 12 457 237 21 10 chr2 114023773 114023870 -139232713 - MER58B DNA MER1_type -243 98 1 * 628 289 50 29 chr2 114023955 114024197 -139232386 + MIR SINE MIR 14 260 -2 283 265 39 0 chr2 114025055 114025157 -139231426 + MIR SINE MIR 156 261 -1 921 160 65 6 chr2 114025630 114025799 -139230784 + AluJo SINE Alu 120 298 -14 218 222 0 12 chr2 114026336 114026398 -139230185 + (TA)n Simple_repeat Simple_repeat 1 63 -17 6858 124 86 0 chr2 114026398 114027532 -139229051 + Tigger3b DNA MER2_type 1 1231 0 218 222 0 12 chr2 114027532 114027550 -139229033 + (TA)n Simple_repeat Simple_repeat 63 80 0 1417 193 32 127 chr2 114027651 114028210 -139228373 + L1MC4 LINE L1 5493 5998 -2044 2373 111 0 0 chr2 114028212 114028518 -139228065 + AluSx SINE Alu 1 306 -6 465 322 3 0 chr2 114028536 114028717 -139227866 + L1MA10 LINE L1 5989 6330 -2 2213 128 0 0 chr2 114028911 114029216 -139227367 - AluSx SINE Alu -7 305 1 392 256 16 47 chr2 114030274 114030403 -139226180 + MER5B DNA MER1_type 3 127 -51 40374 75 6 6 chr2 114030405 114036536 -139220047 - L1PA6 LINE L1 -11 6143 11 243 241 19 0 chr2 114036556 114036610 -139219973 + MER5B DNA MER1_type 124 178 0 1786 168 27 0 chr2 114036651 114036949 -139219634 - AluJb SINE Alu -2 310 5 2470 80 0 0 chr2 114037364 114037675 -139218908 + AluY SINE Alu 1 311 0 594 182 0 0 chr2 114037860 114037959 -139218624 - Tigger7 DNA MER2_type 0 2487 2389 * 1510 165 11 37 chr2 114037957 114038230 -139218353 - Tigger7 DNA MER2_type -284 266 1 470 326 27 5 chr2 114038820 114039004 -139217579 + Charlie8 DNA MER1_type 4 191 -2226 906 209 80 80 chr2 114039069 114039456 -139217127 - MLT1H LTR MaLR -154 395 9 353 249 71 47 chr2 114039809 114039978 -139216605 + MER5B DNA MER1_type 5 177 -1 946 184 0 0 chr2 114040483 114040646 -139215937 - FRAM SINE Alu 0 166 4 382 260 0 19 chr2 114042344 114042448 -139214135 - Charlie8 DNA MER1_type -2244 173 72 382 171 19 17 chr2 114042646 114042742 -139213841 + AluJo SINE Alu 1 58 -244 1444 167 138 70 chr2 114042742 114043155 -139213428 + LTR12 LTR ERV1 40 480 -234 840 219 63 13 chr2 114043157 114043394 -139213189 + AluJo SINE Alu 56 304 -8 701 238 57 38 chr2 114043438 114043876 -139212707 + MLT1D LTR MaLR 3 624 0 16173 167 38 13 chr2 114044329 114045494 -139211089 - L1PB2 LINE L1 -9 6858 5723 1911 139 36 3 chr2 114045494 114045795 -139210788 - AluSx SINE Alu -1 311 1 16173 167 38 13 chr2 114045795 114049493 -139207090 - L1PB2 LINE L1 -1144 5723 2118 242 71 0 24 chr2 114049493 114049535 -139207048 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 2146 93 4 0 chr2 114049539 114049808 -139206775 - AluY SINE Alu -41 270 1 16173 167 38 13 chr2 114049808 114051623 -139204960 - L1PB2 LINE L1 -4751 2116 1 999 135 0 0 chr2 114052631 114052787 -139203796 - AluY SINE Alu 0 311 156 363 272 6 61 chr2 114053059 114053087 -139203496 - MIR SINE MIR -56 152 124 2084 164 49 3 chr2 114053087 114053454 -139203129 - MLT1B LTR MaLR -4 386 3 363 272 6 61 chr2 114053454 114053613 -139202970 - MIR SINE MIR -84 124 8 788 272 102 42 chr2 114053780 114054294 -139202289 + L2 LINE L2 2766 3307 -6 593 279 92 4 chr2 114054322 114054562 -139202021 + L1MC5 LINE L1 5746 6006 -1802 3109 226 68 70 chr2 114054602 114055463 -139201120 + L1MC5 LINE L1 6683 7542 -419 1889 143 0 11 chr2 114055463 114055742 -139200841 - AluJo SINE Alu -24 288 13 3109 226 68 70 chr2 114055742 114056120 -139200463 + L1MC5 LINE L1 7542 7919 -42 291 326 27 20 chr2 114056550 114056697 -139199886 - MER5B DNA MER1_type 0 178 31 251 315 40 34 chr2 114056578 114056727 -139199856 + MER5A DNA MER1_type 40 189 0 * 955 147 70 0 chr2 114056911 114057068 -139199515 + MER82 DNA MER2_type 1 168 -485 357 211 73 113 chr2 114057162 114057366 -139199217 - LTR33 LTR ERVL 0 521 326 588 161 15 205 chr2 114057414 114057687 -139198896 - MER45C DNA AcHobo -23 930 710 764 127 63 0 chr2 114057736 114057862 -139198721 + AluSg/x SINE Alu 162 295 -17 1640 204 7 0 chr2 114057911 114058218 -139198365 + AluJo SINE Alu 1 309 0 6503 121 0 0 chr2 114058312 114059257 -139197326 + L1P LINE L1 3164 4108 -2038 979 89 8 0 chr2 114059733 114059857 -139196726 - AluSg SINE Alu -181 129 5 402 190 90 0 chr2 114059861 114059961 -139196622 - L1 LINE L1 -876 5270 5162 206 228 35 35 chr2 114060280 114060337 -139196246 - L2 LINE L2 -3 3269 3213 342 115 0 0 chr2 114060631 114060683 -139195900 + (TA)n Simple_repeat Simple_repeat 2 53 0 2117 128 0 0 chr2 114060683 114060991 -139195592 - AluSx SINE Alu 0 308 1 2019 152 3 3 chr2 114061040 114061350 -139195233 - AluJo SINE Alu -2 310 1 2511 129 17 101 chr2 114061390 114061864 -139194719 - MER1A DNA MER1_type -2 527 94 2391 93 3 0 chr2 114061885 114062185 -139194398 - AluSp SINE Alu -12 301 1 1111 94 54 179 chr2 114062680 114062977 -139193606 - AluJo SINE Alu -9 303 44 2305 116 0 13 chr2 114063346 114063657 -139192926 - AluSx SINE Alu -5 307 1 2112 72 11 18 chr2 114064333 114064611 -139191972 - AluY SINE Alu -12 299 24 1793 148 3 65 chr2 114065285 114065448 -139191135 - AluJb SINE Alu -21 291 154 2438 84 7 0 chr2 114065448 114065745 -139190838 - AluSc SINE Alu -10 299 1 1793 148 3 65 chr2 114065745 114065891 -139190692 - AluJb SINE Alu -158 154 1 1690 157 41 17 chr2 114065912 114066205 -139190378 - AluJo SINE Alu -12 300 1 1062 174 174 68 chr2 114066222 114066342 -139190241 + MER2 DNA MER2_type 1 107 -237 2229 110 3 3 chr2 114066342 114066642 -139189941 - AluSq SINE Alu -13 300 1 1062 174 174 68 chr2 114066642 114066831 -139189752 + MER2 DNA MER2_type 107 343 -1 1034 259 132 73 chr2 114068087 114069035 -139187548 + L1MC4 LINE L1 7039 8042 0 1777 164 97 30 chr2 114070372 114070743 -139185840 + MSTD LTR MaLR 1 396 0 2472 75 7 0 chr2 114071138 114071445 -139185138 - AluY SINE Alu -2 309 1 2449 53 0 17 chr2 114071536 114071838 -139184745 - AluY SINE Alu -14 297 1 1874 150 17 7 chr2 114072195 114072488 -139184095 + AluJo SINE Alu 1 296 -16 391 247 112 84 chr2 114072494 114072745 -139183838 + L1MC4 LINE L1 7785 8042 0 2193 78 50 0 chr2 114073687 114073970 -139182613 - AluSp SINE Alu -16 297 1 2053 111 11 0 chr2 114074705 114074984 -139181599 - AluSq SINE Alu -31 282 1 1293 212 107 72 chr2 114075452 114075538 -139181045 - Charlie2a DNA MER1_type -61 2801 2719 697 220 8 8 chr2 114075538 114075670 -139180913 - FLAM_C SINE Alu -1 132 1 1293 212 107 72 chr2 114075670 114076335 -139180248 - Charlie2a DNA MER1_type -143 2719 1945 539 243 128 24 chr2 114076328 114076454 -139180129 - Charlie2a DNA MER1_type -1217 1645 1534 * 2087 118 14 3 chr2 114076454 114076743 -139179840 - AluSx SINE Alu -20 292 1 539 243 128 24 chr2 114076743 114076790 -139179793 - Charlie2a DNA MER1_type -1328 1534 1493 710 218 16 0 chr2 114076790 114076914 -139179669 - FLAM_A SINE Alu -6 127 2 539 243 128 24 chr2 114076914 114077094 -139179489 - Charlie2a DNA MER1_type -1369 1493 1333 4437 118 27 29 chr2 114077094 114077792 -139178791 + L1MA6 LINE L1 5604 6300 0 267 311 0 0 chr2 114077811 114077885 -139178698 - MER2 DNA MER2_type -4 341 268 1126 126 4 118 chr2 114077934 114078172 -139178411 - MER2 DNA MER2_type -134 211 1 517 184 48 44 chr2 114078172 114078376 -139178207 - Charlie2a DNA MER1_type -1725 1137 933 439 238 48 0 chr2 114078396 114078501 -139178082 + MIR SINE MIR 12 121 -141 2738 177 36 11 chr2 114078562 114079030 -139177553 + MER21B LTR ERV1 1 480 -383 1811 169 14 3 chr2 114079048 114079344 -139177239 - AluJo SINE Alu -13 299 1 933 209 0 0 chr2 114079372 114079535 -139177048 + AluJb SINE Alu 136 298 -14 1688 182 95 17 chr2 114079545 114079903 -139176680 + MER21B LTR ERV1 474 859 -4 690 186 241 86 chr2 114079913 114080035 -139176548 - Charlie2a DNA MER1_type -2235 627 525 2285 114 3 0 chr2 114080035 114080343 -139176240 + AluSg SINE Alu 1 309 -1 690 186 241 86 chr2 114080343 114080400 -139176183 - Charlie2a DNA MER1_type -2337 525 478 1766 171 67 6 chr2 114080400 114080728 -139175855 + MER7A DNA MER2_type 1 346 0 690 186 241 86 chr2 114080728 114080929 -139175654 - Charlie2a DNA MER1_type -2384 478 187 2319 100 3 0 chr2 114081794 114082103 -139174480 + AluSp SINE Alu 1 310 -3 1562 150 16 28 chr2 114082483 114082737 -139173846 + AluJb SINE Alu 60 310 -2 229 320 68 48 chr2 114083851 114083954 -139172629 + MIR SINE MIR 20 124 -84 235 246 0 0 chr2 114084487 114084544 -139172039 + A-rich Low_complexity Low_complexity 1 57 0 1856 155 34 3 chr2 114085130 114085426 -139171157 + AluJo SINE Alu 1 305 -7 1046 148 11 21 chr2 114085950 114085966 -139170617 - AluSc SINE Alu -4 305 290 1705 78 60 0 chr2 114085966 114086183 -139170400 - AluSc SINE Alu -8 301 72 1046 148 11 21 chr2 114086183 114086355 -139170228 - AluSc SINE Alu -19 290 119 595 120 0 0 chr2 114086355 114086430 -139170153 - AluY SINE Alu -25 286 212 1711 55 0 28 chr2 114086757 114086975 -139169608 - AluY SINE Alu -99 212 1 587 86 0 0 chr2 114086975 114087045 -139169538 - AluSc SINE Alu -165 144 75 1842 58 5 0 chr2 114087045 114087269 -139169314 - AluY SINE Alu -17 294 70 2016 121 14 10 chr2 114087480 114087769 -139168814 + AluSc SINE Alu 1 290 -19 1935 106 67 7 chr2 114088286 114088570 -139168013 + AluSx SINE Alu 1 301 -11 830 117 25 8 chr2 114088786 114088906 -139167677 - AluSp SINE Alu -191 122 1 1379 157 71 4 chr2 114089560 114089827 -139166756 - MLT1D LTR MaLR -220 285 1 1508 210 241 48 chr2 114089827 114090404 -139166179 - L1MC4a LINE L1 -950 6858 6180 2290 89 7 3 chr2 114090404 114090707 -139165876 - AluSx SINE Alu -8 304 1 1508 210 241 48 chr2 114090707 114090783 -139165800 - L1MC4a LINE L1 -1628 6180 6120 306 255 63 49 chr2 114090768 114091038 -139165545 - L1M4 LINE L1 -1300 4846 4575 * 188 120 0 0 chr2 114092983 114093008 -139163575 - L2 LINE L2 -25 3288 3264 353 236 27 45 chr2 114093337 114093447 -139163136 - MIR SINE MIR -64 144 37 2197 114 3 0 chr2 114093707 114094004 -139162579 + AluSq SINE Alu 9 306 -7 781 182 110 7 chr2 114096124 114096278 -139160305 - AluJb SINE Alu -6 306 137 1679 169 20 10 chr2 114096884 114097185 -139159398 - AluJb SINE Alu -8 304 1 11982 193 28 15 chr2 114097553 114097695 -139158888 + L1MB7 LINE L1 2589 2728 -3418 2415 95 0 0 chr2 114097695 114098000 -139158583 - AluSq SINE Alu -8 305 1 11982 193 28 15 chr2 114098000 114098176 -139158407 + L1MB7 LINE L1 2728 2900 -3246 1950 141 7 7 chr2 114098176 114098474 -139158109 - AluSp SINE Alu -15 298 1 11982 193 28 15 chr2 114098474 114099957 -139156626 + L1MB7 LINE L1 2900 4438 -1708 189 0 0 0 chr2 114099957 114099978 -139156605 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 11982 193 28 15 chr2 114099978 114100785 -139155798 + L1MB7 LINE L1 4438 5233 -913 1742 154 42 33 chr2 114100903 114101133 -139155450 + L1MB7 LINE L1 5842 6077 -107 2153 116 0 7 chr2 114101133 114101450 -139155133 + AluSg SINE Alu 1 310 0 1742 154 42 33 chr2 114101450 114101550 -139155033 + L1MB7 LINE L1 6077 6175 -9 1916 85 57 18 chr2 114102426 114102707 -139153876 + AluY SINE Alu 1 292 -19 727 240 41 95 chr2 114102980 114103456 -139153127 - L1MC4 LINE L1 -188 7854 7354 569 52 13 0 chr2 114103456 114103533 -139153050 + (TTTC)n Simple_repeat Simple_repeat 3 80 0 2164 98 0 0 chr2 114103537 114103813 -139152770 - AluSq SINE Alu -37 276 1 727 240 41 95 chr2 114103813 114104544 -139152039 - L1MC4 LINE L1 -691 7351 6709 * 1093 212 17 56 chr2 114104542 114104667 -139151916 - L1MDb LINE L1 -3693 2713 2585 1676 183 0 37 chr2 114104667 114104989 -139151594 - AluJo SINE Alu -2 310 1 1093 212 17 56 chr2 114104989 114105050 -139151533 - L1MDb LINE L1 -3821 2585 2523 2119 122 0 0 chr2 114105050 114105336 -139151247 - AluY SINE Alu -25 286 1 1093 212 17 56 chr2 114105336 114105506 -139151077 - L1MDb LINE L1 -3883 2523 2370 331 169 52 13 chr2 114105506 114105583 -139151000 - L1MDb LINE L1 -5114 1295 1216 * 1628 179 39 39 chr2 114105579 114105993 -139150590 - L1MC2 LINE L1 0 6344 5931 252 192 58 75 chr2 114106438 114106558 -139150025 + AluYb8 SINE Alu 152 241 -67 323 242 32 11 chr2 114107142 114107237 -139149346 + L2 LINE L2 2515 2611 -703 300 324 27 65 chr2 114107288 114107346 -139149237 - L1MC2 LINE L1 -388 5733 5674 1693 139 0 107 chr2 114107346 114107384 -139149199 - AluJb SINE Alu -3 309 269 333 47 0 0 chr2 114107384 114107427 -139149156 + (TG)n Simple_repeat Simple_repeat 2 44 0 1693 139 0 107 chr2 114107427 114107534 -139149049 - AluJb SINE Alu -43 269 152 2328 83 0 0 chr2 114107534 114107822 -139148761 - AluY SINE Alu -21 290 3 1693 139 0 107 chr2 114107822 114108021 -139148562 - AluJb SINE Alu -160 152 1 300 324 27 65 chr2 114108021 114108147 -139148436 - L1MC2 LINE L1 -447 5674 5556 22 35 0 0 chr2 114108232 114108261 -139148322 + AT_rich Low_complexity Low_complexity 1 29 0 379 205 0 26 chr2 114108556 114108634 -139147949 + L1MC/D LINE L1 5421 5496 -746 * 1077 266 16 139 chr2 114108628 114108746 -139147837 + L1M4 LINE L1 4269 4400 -1746 2087 104 7 17 chr2 114108746 114109044 -139147539 + AluSq SINE Alu 1 295 -18 1077 266 16 139 chr2 114109044 114109326 -139147257 + L1M4 LINE L1 4400 4715 -1431 2421 84 0 0 chr2 114109326 114109623 -139146960 + AluY SINE Alu 1 297 -14 1543 120 0 0 chr2 114109633 114109842 -139146741 + AluSq SINE Alu 1 209 -104 1077 266 16 139 chr2 114109842 114110047 -139146536 + L1M4 LINE L1 4725 4775 -1371 1795 121 68 11 chr2 114110047 114110327 -139146256 + AluSx SINE Alu 1 296 -16 1077 266 16 139 chr2 114110327 114110482 -139146101 + L1M4 LINE L1 4775 4947 -1199 790 263 0 0 chr2 114110583 114110777 -139145806 - L1MC2 LINE L1 -975 5171 4978 2253 108 0 3 chr2 114110817 114111113 -139145470 + AluSq SINE Alu 4 298 -15 3034 163 19 33 chr2 114111132 114111194 -139145389 - L1MCb LINE L1 -4851 1194 1133 1927 194 40 3 chr2 114111194 114111540 -139145043 - MLT1A1 LTR MaLR -3 362 4 3034 163 19 33 chr2 114111540 114111601 -139144982 - L1MCb LINE L1 -4912 1133 1073 2514 80 0 0 chr2 114111601 114111912 -139144671 - AluY SINE Alu 0 311 1 3034 163 19 33 chr2 114111912 114112619 -139143964 - L1MCb LINE L1 -4972 1073 721 705 206 123 23 chr2 114112627 114112886 -139143697 + L1MD3 LINE L1 7581 7950 -45 315 244 47 58 chr2 114112945 114113031 -139143552 - L1MD3 LINE L1 -1428 6567 6483 1943 141 23 3 chr2 114113266 114113572 -139143011 + AluSx SINE Alu 1 312 0 1080 133 0 24 chr2 114113585 114113776 -139142807 + AluSg/x SINE Alu 129 312 0 2318 79 0 0 chr2 114114180 114114472 -139142111 - AluY SINE Alu -19 292 1 1362 184 23 0 chr2 114114472 114114747 -139141836 - MER33 DNA MER1_type -52 272 1 1962 101 0 4 chr2 114115129 114115387 -139141196 - AluSx SINE Alu -51 261 5 798 134 0 39 chr2 114116176 114116303 -139140280 + FLAM_C SINE Alu 22 143 0 2290 97 3 10 chr2 114116317 114116628 -139139955 + AluSc SINE Alu 1 309 0 877 238 35 32 chr2 114116656 114116938 -139139645 + AluSx SINE Alu 17 299 -13 1577 192 95 31 chr2 114117722 114118112 -139138471 + Charlie1 DNA MER1_type 2347 2761 0 315 0 0 0 chr2 114118578 114118613 -139137970 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 2970 109 6 14 chr2 114120714 114121301 -139135282 + MER4A LTR ERV1 1 664 0 526 262 195 0 chr2 114121557 114121706 -139134877 - MIR SINE MIR -75 187 10 1765 237 103 17 chr2 114122174 114122794 -139133789 - L1MD2 LINE L1 -84 6275 5565 1461 189 165 5 chr2 114122794 114123170 -139133413 + MER21B LTR ERV1 13 448 -415 267 31 0 0 chr2 114124029 114124061 -139132522 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 1093 65 0 58 chr2 114124185 114124340 -139132243 + AluSq/x SINE Alu 1 146 -166 2987 72 5 5 chr2 114124342 114124746 -139131837 + LTR66 LTR ERVL 1 404 -206 6057 114 15 22 chr2 114124876 114125361 -139131222 + L1MA2 LINE L1 4687 5174 -1130 2087 97 0 17 chr2 114125361 114125681 -139130902 + AluSx SINE Alu 1 315 0 6057 114 15 22 chr2 114125681 114126720 -139129863 + L1MA2 LINE L1 5174 6202 -102 2249 103 13 3 chr2 114127721 114128031 -139128552 + AluSq SINE Alu 1 313 0 1843 136 0 0 chr2 114128518 114128769 -139127814 + AluSx SINE Alu 1 251 -61 1846 146 16 42 chr2 114128890 114128915 -139127668 + L1PB4 LINE L1 5712 5736 -420 1967 125 10 30 chr2 114128915 114129219 -139127364 + AluSx SINE Alu 1 298 -14 1846 146 16 42 chr2 114129219 114129577 -139127006 + L1PB4 LINE L1 5736 6085 -71 974 211 70 0 chr2 114129572 114129885 -139126698 + L1MDb LINE L1 1189 1523 -5020 * 433 164 58 0 chr2 114129867 114129971 -139126612 + L1MDb LINE L1 1827 1936 -4604 * 569 354 51 19 chr2 114129988 114130398 -139126185 + L1 LINE L1 3425 3847 -2299 1528 179 74 24 chr2 114130401 114130781 -139125802 + L1MC3 LINE L1 6755 7153 -632 1156 133 5 10 chr2 114130791 114130986 -139125597 - MER41C LTR ERV1 -12 542 349 253 228 0 22 chr2 114130986 114131078 -139125505 + (CATA)n Simple_repeat Simple_repeat 2 91 0 1929 126 68 0 chr2 114131079 114131404 -139125179 - MER41C LTR ERV1 -207 347 1 1648 187 8 4 chr2 114131408 114131886 -139124697 + L1MC3 LINE L1 7162 7785 0 2388 78 0 16 chr2 114132163 114132469 -139124114 + AluSx SINE Alu 1 301 -11 2466 79 0 0 chr2 114132541 114132844 -139123739 + AluY SINE Alu 1 303 -8 2186 113 7 3 chr2 114134993 114135294 -139121289 + AluSc SINE Alu 1 302 -7 301 244 87 17 chr2 114135336 114135451 -139121132 + L1MC5 LINE L1 7656 7778 -183 2411 73 10 3 chr2 114136053 114136355 -139120228 + AluY SINE Alu 1 304 -7 289 252 35 43 chr2 114137021 114137136 -139119447 - MIR SINE MIR -80 182 69 21 57 0 0 chr2 114137518 114137553 -139119030 + AT_rich Low_complexity Low_complexity 1 35 0 2637 73 126 8 chr2 114137565 114137928 -139118655 + MLT2A1 LTR ERVL 1 416 -28 269 26 0 26 chr2 114137928 114137967 -139118616 + (TCCA)n Simple_repeat Simple_repeat 1 38 0 2637 73 126 8 chr2 114137967 114138000 -139118583 + MLT2A1 LTR ERVL 416 444 0 2110 115 3 3 chr2 114138500 114138804 -139117779 + AluSg1 SINE Alu 1 304 -5 1737 176 3 3 chr2 114139228 114139518 -139117065 - AluSx SINE Alu -22 290 1 259 313 60 24 chr2 114139570 114139653 -139116930 - MIR SINE MIR -78 130 45 686 69 0 0 chr2 114140225 114140312 -139116271 + AluY SINE Alu 1 87 -224 1003 155 54 75 chr2 114141125 114141422 -139115161 + MER33 DNA MER1_type 1 274 -50 183 42 0 0 chr2 114141422 114141446 -139115137 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 793 186 0 8 chr2 114141469 114141598 -139114985 - FRAM SINE Alu -44 132 5 356 317 103 0 chr2 114141763 114141908 -139114675 + MIR3 SINE MIR 41 200 -8 2048 141 0 16 chr2 114143023 114143336 -139113247 - AluSx SINE Alu -4 308 1 198 143 0 0 chr2 114146013 114146048 -139110535 + (ATG)n Simple_repeat Simple_repeat 2 36 0 984 203 31 51 chr2 114146048 114146304 -139110279 - MIR SINE MIR -10 252 2 24 53 0 0 chr2 114146601 114146639 -139109944 + AT_rich Low_complexity Low_complexity 1 38 0 29 0 0 0 chr2 114147703 114147732 -139108851 + AT_rich Low_complexity Low_complexity 1 29 0 309 254 114 72 chr2 114149083 114149319 -139107264 + L1ME4a LINE L1 5773 6018 -103 272 332 25 26 chr2 114149450 114149623 -139106960 + MIR SINE MIR 24 197 -58 596 290 42 23 chr2 114150126 114150340 -139106243 + MIR SINE MIR 24 241 -21 24 53 0 0 chr2 114151124 114151162 -139105421 + AT_rich Low_complexity Low_complexity 1 38 0 2112 117 7 3 chr2 114151214 114151514 -139105069 - AluSx SINE Alu -9 303 3 379 309 66 15 chr2 114152746 114152882 -139103701 - MIR3 SINE MIR -57 151 9 2294 108 0 0 chr2 114153516 114153812 -139102771 + AluSx SINE Alu 1 296 -16 1587 179 7 29 chr2 114153847 114154154 -139102429 + AluJb SINE Alu 1 300 -12 301 241 0 0 chr2 114154788 114154871 -139101712 + T-rich Low_complexity Low_complexity 1 83 0 971 158 18 12 chr2 114155791 114155962 -139100621 + AluSg/x SINE Alu 134 305 -7 1518 100 0 92 chr2 114156735 114156986 -139099597 - AluY SINE Alu -83 228 1 202 164 73 73 chr2 114157282 114157337 -139099246 - MIR SINE MIR -21 241 187 1394 109 84 5 chr2 114158657 114158888 -139097695 + AluSg/x SINE Alu 68 314 0 503 285 86 4 chr2 114158900 114159167 -139097416 + L1ME4a LINE L1 5539 5827 -294 227 216 0 0 chr2 114159253 114159290 -139097293 + AluJo SINE Alu 1 37 -265 2160 97 14 0 chr2 114159290 114159579 -139097004 - AluSx SINE Alu -19 293 1 1508 176 4 8 chr2 114159579 114159841 -139096742 + AluJo SINE Alu 26 286 -26 2158 98 3 3 chr2 114159849 114160159 -139096424 + AluSq SINE Alu 1 313 0 237 220 34 0 chr2 114160215 114160274 -139096309 + L1ME4a LINE L1 5978 6038 -83 188 308 20 144 chr2 114160874 114160929 -139095654 - MER5B DNA MER1_type -6 172 112 2154 76 9 44 chr2 114160929 114161245 -139095338 + AluY SINE Alu 1 305 -6 188 308 20 144 chr2 114161245 114161319 -139095264 - MER5B DNA MER1_type -66 112 72 1751 161 36 9 chr2 114161319 114161654 -139094929 + L1MB8 LINE L1 5820 6163 -15 188 308 20 144 chr2 114161654 114161718 -139094865 - MER5B DNA MER1_type -106 72 2 4096 234 49 42 chr2 114162187 114162424 -139094159 + L1M4 LINE L1 3784 4018 -2128 2074 129 3 3 chr2 114162424 114162727 -139093856 + AluSx SINE Alu 1 303 -9 4096 234 49 42 chr2 114162727 114163127 -139093456 + L1M4 LINE L1 4018 4414 -1732 2074 107 4 0 chr2 114163127 114163453 -139093130 + AluSq SINE Alu 1 327 0 4096 234 49 42 chr2 114163453 114163976 -139092607 + L1M4 LINE L1 4414 4961 -1185 1821 179 0 0 chr2 114163976 114164273 -139092310 + AluJb SINE Alu 1 297 -15 4096 234 49 42 chr2 114164273 114164598 -139091985 + L1M4 LINE L1 4961 5282 -864 4802 136 16 1 chr2 114164606 114165416 -139091167 - L1PA16 LINE L1 0 6166 5345 194 62 31 0 chr2 114166133 114166165 -139090418 + (CCCCCA)n Simple_repeat Simple_repeat 4 36 0 1965 114 11 0 chr2 114166814 114167076 -139089507 + AluSg SINE Alu 35 299 -11 727 227 23 54 chr2 114167421 114167689 -139088894 - MER4C LTR ERV1 -2 695 273 537 143 17 34 chr2 114167704 114167823 -139088760 - MER4A LTR ERV1 -547 117 1 320 292 139 34 chr2 114170033 114170242 -139086341 + L2 LINE L2 3083 3313 0 1692 240 59 60 chr2 114170727 114171390 -139085193 + MER21B LTR ERV1 52 713 -150 201 74 0 0 chr2 114171484 114171511 -139085072 + (A)n Simple_repeat Simple_repeat 1 27 0 6700 134 9 3 chr2 114171738 114173794 -139082789 + L1MA3 LINE L1 4125 6195 -110 802 236 55 58 chr2 114174382 114174674 -139081909 + MLT1E1 LTR MaLR 3 293 -361 247 281 12 37 chr2 114174807 114174889 -139081694 - L3 LINE CR1 -82 1495 1416 2162 113 0 0 chr2 114174932 114175223 -139081360 + AluSg SINE Alu 1 291 -19 288 0 0 0 chr2 114175223 114175255 -139081328 + (TTA)n Simple_repeat Simple_repeat 3 34 0 225 178 164 27 chr2 114175386 114175459 -139081124 - MIR3 SINE MIR -45 163 81 2112 116 0 53 chr2 114176178 114176498 -139080085 - AluSx SINE Alu -6 306 4 2195 99 0 0 chr2 114177043 114177363 -139079220 - AluSx SINE Alu 0 320 1 2083 100 82 0 chr2 114177662 114177942 -139078641 + AluSc SINE Alu 1 303 -6 1783 106 55 18 chr2 114178197 114178470 -139078113 - AluSq SINE Alu -17 296 14 2517 132 66 12 chr2 114178894 114179304 -139077279 - MSTB1 LTR MaLR 0 432 1 5074 159 48 61 chr2 114179717 114179933 -139076650 - L1MC2 LINE L1 -1 6343 6126 2125 122 3 0 chr2 114179933 114180227 -139076356 - AluSx SINE Alu -17 295 1 5074 159 48 61 chr2 114180227 114180540 -139076043 - L1MC2 LINE L1 -218 6126 5811 1606 218 0 7 chr2 114180540 114180848 -139075735 + AluJb SINE Alu 7 312 0 5074 159 48 61 chr2 114180848 114181415 -139075168 - L1MC2 LINE L1 -533 5811 5260 451 187 57 8 chr2 114181413 114181536 -139075047 + L1P LINE L1 5192 5320 -826 * 294 315 101 17 chr2 114183662 114183840 -139072743 - MIR SINE MIR -3 259 67 784 276 92 5 chr2 114183852 114184069 -139072514 - MIR SINE MIR -6 256 21 222 329 0 35 chr2 114185072 114185157 -139071426 - L2 LINE L2 -1 3312 3231 643 236 140 31 chr2 114185845 114186074 -139070509 + MER112 DNA MER1_type 1 254 -6 22 0 0 0 chr2 114187424 114187446 -139069137 + AT_rich Low_complexity Low_complexity 1 22 0 249 279 93 50 chr2 114188211 114188351 -139068232 + L3 LINE CR1 1191 1336 -241 261 337 0 24 chr2 114188410 114188493 -139068090 + L3 LINE CR1 1491 1571 -6 344 268 297 0 chr2 114189108 114189246 -139067337 - MER5A DNA MER1_type -1 188 10 3550 123 18 0 chr2 114191186 114191691 -139064892 + MER1A DNA MER1_type 15 528 -1 1802 153 25 0 chr2 114192421 114192695 -139063888 + AluJb SINE Alu 17 297 -15 463 302 73 16 chr2 114192964 114193156 -139063427 - L2 LINE L2 -193 3079 2877 195 335 173 26 chr2 114193185 114193908 -139062675 - L2 LINE L2 -458 2856 2028 849 214 78 19 chr2 114194535 114194741 -139061842 - MIR SINE MIR -44 218 1 1957 106 7 43 chr2 114194813 114195115 -139061468 + AluSx SINE Alu 1 291 -21 307 67 90 0 chr2 114195229 114195318 -139061265 + (TA)n Simple_repeat Simple_repeat 2 98 0 478 276 98 6 chr2 114196133 114196296 -139060287 + MIR SINE MIR 20 197 -65 2164 208 29 69 chr2 114197621 114198284 -139058299 - L1 LINE L1 -1826 4320 3685 229 267 17 0 chr2 114198718 114198778 -139057805 - Charlie8 DNA MER1_type 0 2417 2357 289 263 17 51 chr2 114199001 114199119 -139057464 + MIR SINE MIR 93 206 -56 2231 120 0 0 chr2 114199428 114199736 -139056847 - AluSc SINE Alu -1 308 1 244 274 85 19 chr2 114200084 114200190 -139056393 - L2 LINE L2 -20 3293 3181 326 156 11 89 chr2 114200222 114200312 -139056271 - MIR3 SINE MIR -11 197 115 462 160 0 53 chr2 114201310 114201404 -139055179 - L1MA4A LINE L1 -5 6298 6210 612 225 139 11 chr2 114201500 114201687 -139054896 + MIR SINE MIR 10 220 -42 251 300 0 0 chr2 114201737 114201797 -139054786 + L2 LINE L2 3211 3270 -2 210 284 0 15 chr2 114202115 114202182 -139054401 + CT-rich Low_complexity Low_complexity 4 69 0 213 39 0 0 chr2 114202853 114202879 -139053704 + (TTTTA)n Simple_repeat Simple_repeat 5 30 0 2138 104 3 33 chr2 114202881 114203180 -139053403 - AluSp SINE Alu -23 290 1 317 262 74 41 chr2 114204139 114204261 -139052322 + MIR SINE MIR 124 249 -13 587 244 1 24 chr2 114204701 114204865 -139051718 - L1PB4 LINE L1 0 6156 6002 180 0 0 0 chr2 114205367 114205387 -139051196 + (TA)n Simple_repeat Simple_repeat 2 21 0 2115 247 102 10 chr2 114205549 114206583 -139050000 + L1MC3 LINE L1 4304 5444 -743 1499 203 121 22 chr2 114206586 114206929 -139049654 + MLT2B2 LTR ERVL 76 458 -57 1626 166 53 0 chr2 114206929 114207213 -139049370 - AluJb SINE Alu -12 300 2 1499 203 121 22 chr2 114207213 114207233 -139049350 + MLT2B2 LTR ERVL 458 475 -40 201 178 0 0 chr2 114207237 114207282 -139049301 + (TA)n Simple_repeat Simple_repeat 1 45 0 1630 219 75 39 chr2 114207297 114207840 -139048743 + L1MC3 LINE L1 5456 6018 -1767 519 235 0 0 chr2 114210836 114210938 -139045645 + AluJb SINE Alu 121 222 -90 972 119 0 0 chr2 114210942 114211068 -139045515 + AluSg/x SINE Alu 164 289 -23 1826 142 20 26 chr2 114211867 114212170 -139044413 + AluJb SINE Alu 1 301 -11 261 346 0 15 chr2 114213621 114213754 -139042829 + L1MDb LINE L1 765 895 -5514 1870 202 16 43 chr2 114213801 114214133 -139042450 - L1MB7 LINE L1 -77 6107 5788 684 152 10 177 chr2 114214133 114214331 -139042252 - FAM SINE Alu -7 168 4 1870 202 16 43 chr2 114214331 114214438 -139042145 - L1MB7 LINE L1 -396 5788 5680 935 143 0 8 chr2 114214450 114214583 -139042000 - FLAM_C SINE Alu -1 132 1 1152 206 21 43 chr2 114214615 114214941 -139041642 - L1MB7 LINE L1 -1613 4533 4215 400 213 0 13 chr2 114215195 114215270 -139041313 - FLAM_A SINE Alu -68 74 1 719 91 0 0 chr2 114215273 114215361 -139041222 - AluY SINE Alu -12 299 212 1612 70 9 14 chr2 114215688 114215901 -139040682 - AluY SINE Alu -99 212 1 811 102 0 87 chr2 114215901 114215971 -139040612 - AluSc SINE Alu -165 144 88 2457 65 0 0 chr2 114215971 114216263 -139040320 - AluY SINE Alu -19 292 1 811 102 0 87 chr2 114216263 114216319 -139040264 - AluSc SINE Alu -221 88 29 627 121 0 0 chr2 114216319 114216402 -139040181 - AluSc SINE Alu -225 84 2 245 208 19 0 chr2 114216404 114216457 -139040126 - Charlie1 DNA MER1_type -78 2683 2630 2113 83 8 4 chr2 114216507 114216773 -139039810 - AluSq SINE Alu -10 303 37 2218 81 3 3 chr2 114217500 114217807 -139038776 - AluSg SINE Alu 0 307 1 1110 139 12 0 chr2 114217873 114218046 -139038537 + MER2 DNA MER2_type 37 211 -134 27 73 0 0 chr2 114218549 114218604 -139037979 + AT_rich Low_complexity Low_complexity 1 55 0 2664 26 7 3 chr2 114219732 114220039 -139036544 - AluY SINE Alu -3 308 1 21 36 0 0 chr2 114220501 114220529 -139036054 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr2 114221039 114221068 -139035515 + AT_rich Low_complexity Low_complexity 1 29 0 195 340 128 33 chr2 114222149 114222455 -139034128 - L2 LINE L2 -647 2667 2333 188 306 255 10 chr2 114223847 114223945 -139032638 + MIR3 SINE MIR 33 154 -54 2401 85 7 0 chr2 114225800 114226107 -139030476 + AluSp SINE Alu 1 309 -4 2482 235 76 18 chr2 114226908 114227726 -139028857 - L1ME2 LINE L1 -21 6143 5279 200 250 18 0 chr2 114227726 114227782 -139028801 + (TA)n Simple_repeat Simple_repeat 1 57 0 1395 247 141 11 chr2 114227888 114228634 -139027949 - L1ME2 LINE L1 -946 5200 4358 1510 230 45 67 chr2 114228670 114229377 -139027206 + L1MC4 LINE L1 7363 8042 0 183 42 0 0 chr2 114229529 114229553 -139027030 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 563 211 39 16 chr2 114230419 114230547 -139026036 - L2 LINE L2 0 3313 3183 2741 151 22 8 chr2 114231535 114232039 -139024544 + MER34B LTR ERV1 26 536 -29 238 346 120 0 chr2 114232177 114232310 -139024273 + L3 LINE CR1 564 712 -865 223 328 0 0 chr2 114232369 114232436 -139024147 + MIR SINE MIR 196 262 0 267 299 134 35 chr2 114232649 114232850 -139023733 + L3 LINE CR1 750 970 -607 1933 110 4 4 chr2 114233134 114233406 -139023177 + AluSx SINE Alu 38 309 -3 222 276 17 0 chr2 114233497 114233555 -139023028 + L3 LINE CR1 1399 1457 -120 1684 127 104 10 chr2 114234256 114234563 -139022020 - MER44D DNA MER2_type -3 606 1 2011 99 4 0 chr2 114234649 114234911 -139021672 + AluSp SINE Alu 37 299 -14 2289 113 0 3 chr2 114234916 114235218 -139021365 - AluSx SINE Alu -11 301 1 327 274 15 132 chr2 114235994 114236191 -139020392 + L1MC4 LINE L1 7594 7767 -275 2432 111 12 0 chr2 114236536 114236869 -139019714 + MER1B DNA MER1_type 1 337 0 2200 121 3 0 chr2 114237867 114238164 -139018419 + AluSx SINE Alu 1 298 -14 2384 84 0 3 chr2 114238175 114238473 -139018110 + AluSx SINE Alu 1 297 -15 4823 142 44 14 chr2 114238499 114239335 -139017248 - MER6 DNA MER2_type -4 861 1 293 335 90 60 chr2 114239497 114239996 -139016587 + L2 LINE L2 2447 2960 -354 1984 163 32 55 chr2 114240079 114240516 -139016067 + LTR3 LTR ERVK 1 427 -2 25 83 0 0 chr2 114240935 114240995 -139015588 + AT_rich Low_complexity Low_complexity 1 60 0 3180 41 3 3 chr2 114241392 114241783 -139014800 + L1PA5 LINE L1 5760 6150 -4 24 0 0 0 chr2 114241783 114241807 -139014776 + AT_rich Low_complexity Low_complexity 1 24 0 636 330 99 0 chr2 114241915 114242136 -139014447 - MIR SINE MIR -8 254 12 22 0 0 0 chr2 114242373 114242395 -139014188 + AT_rich Low_complexity Low_complexity 1 22 0 286 82 41 0 chr2 114242450 114242499 -139014084 - AluJb SINE Alu 0 302 252 1148 194 5 0 chr2 114242499 114242695 -139013888 - AluJb SINE Alu -115 197 1 2313 105 0 0 chr2 114243493 114243789 -139012794 - AluSx SINE Alu -16 296 1 2533 75 0 0 chr2 114244515 114244823 -139011760 - AluY SINE Alu -3 308 1 610 325 115 61 chr2 114244916 114245948 -139010635 + L2 LINE L2 1950 3080 -192 745 267 36 66 chr2 114246136 114246469 -139010114 + L2 LINE L2 2218 2540 -774 257 242 48 0 chr2 114246472 114246534 -139010049 + AluSx SINE Alu 2 66 -236 1611 121 0 9 chr2 114246595 114246839 -139009744 + AluSx SINE Alu 64 305 0 274 250 23 38 chr2 114246873 114247005 -139009578 + L2 LINE L2 2553 2682 -632 183 340 78 19 chr2 114247033 114247136 -139009447 + L2 LINE L2 3203 3311 -2 2210 123 0 3 chr2 114247515 114247815 -139008768 - AluSx SINE Alu -13 299 1 842 171 0 0 chr2 114248447 114248576 -139008007 + AluJo SINE Alu 6 134 -178 28 61 0 0 chr2 114249731 114249780 -139006803 + AT_rich Low_complexity Low_complexity 1 49 0 21 0 0 0 chr2 114250018 114250039 -139006544 + AT_rich Low_complexity Low_complexity 1 21 0 2057 116 0 64 chr2 114250717 114251045 -139005538 - AluSx SINE Alu -5 307 1 24 53 0 0 chr2 114251462 114251500 -139005083 + AT_rich Low_complexity Low_complexity 1 38 0 363 246 104 8 chr2 114251716 114251850 -139004733 - MIR SINE MIR -38 224 78 672 280 63 5 chr2 114252695 114252902 -139003681 + MER58A DNA MER1_type 3 221 -3 1069 117 14 0 chr2 114252976 114253121 -139003462 - AluSg/x SINE Alu -12 300 154 2243 101 3 28 chr2 114253749 114254066 -139002517 + AluSp SINE Alu 1 309 -4 696 149 116 100 chr2 114254963 114255130 -139001453 - MER2 DNA MER2_type 0 345 171 2197 102 10 7 chr2 114255130 114255424 -139001159 - AluSg SINE Alu -15 295 1 696 149 116 100 chr2 114255424 114255497 -139001086 - MER2 DNA MER2_type -174 171 101 * 1377 162 10 142 chr2 114255495 114255520 -139001063 - MER7A DNA MER2_type -2692 346 319 2173 120 142 5 chr2 114255520 114255894 -139000689 + MSTA LTR MaLR 2 426 -2 1377 162 10 142 chr2 114255894 114256269 -139000314 - MER7A DNA MER2_type -2719 319 1 331 182 234 0 chr2 114256271 114256348 -139000235 - MER2 DNA MER2_type -249 96 2 471 269 73 65 chr2 114256612 114256735 -138999848 - MIR SINE MIR -3 259 139 2224 93 0 10 chr2 114256735 114257035 -138999548 - AluY SINE Alu -14 297 1 471 269 73 65 chr2 114257035 114257156 -138999427 - MIR SINE MIR -123 139 13 2444 98 0 0 chr2 114257212 114257517 -138999066 - AluSg SINE Alu -5 305 1 385 255 49 76 chr2 114257693 114257904 -138998679 - MIR SINE MIR -29 233 36 1673 176 16 38 chr2 114258760 114259078 -138997505 + AluJo SINE Alu 2 312 0 21 57 0 0 chr2 114259116 114259151 -138997432 + AT_rich Low_complexity Low_complexity 1 35 0 416 171 45 23 chr2 114259544 114259632 -138996951 - Tigger5 DNA MER2_type 0 2323 2234 24 0 0 0 chr2 114260021 114260045 -138996538 + AT_rich Low_complexity Low_complexity 1 24 0 1524 192 14 21 chr2 114260577 114260864 -138995719 + AluJo SINE Alu 1 285 -27 816 142 0 0 chr2 114260881 114261001 -138995582 - FLAM_C SINE Alu -23 120 1 24 53 0 0 chr2 114261003 114261041 -138995542 + AT_rich Low_complexity Low_complexity 1 38 0 413 295 52 34 chr2 114261388 114261845 -138994738 + L1MEd LINE L1 1137 1576 -4639 2071 120 16 10 chr2 114261917 114262225 -138994358 + AluSx SINE Alu 1 310 -2 1970 157 0 0 chr2 114262244 114262537 -138994046 + AluSx SINE Alu 12 304 -8 374 273 89 10 chr2 114262745 114263057 -138993526 + L1MEd LINE L1 2179 2510 -3705 265 230 16 56 chr2 114263047 114263084 -138993499 + L1MEd LINE L1 2972 3009 -3206 * 2116 118 3 7 chr2 114263084 114263390 -138993193 + AluSq SINE Alu 1 305 -8 265 230 16 56 chr2 114263390 114263478 -138993105 + L1MEd LINE L1 3009 3092 -3123 657 266 47 36 chr2 114263527 114263970 -138992613 + L1MEd LINE L1 3206 3653 -2562 1743 98 20 4 chr2 114263987 114264242 -138992341 - AluSq SINE Alu -15 298 40 581 289 67 105 chr2 114264350 114264362 -138992221 + L1MEd LINE L1 3734 3745 -2470 2328 97 0 0 chr2 114264362 114264652 -138991931 + AluSq SINE Alu 1 290 -23 581 289 67 105 chr2 114264652 114265162 -138991421 + L1MEd LINE L1 3745 4236 -1979 649 269 84 30 chr2 114265169 114265575 -138991008 + L1MEc LINE L1 41 468 -5928 2091 111 17 0 chr2 114265667 114265964 -138990619 + AluSx SINE Alu 1 302 -10 5162 157 48 16 chr2 114266234 114266579 -138990004 + L1PA16 LINE L1 4039 4372 -1794 348 43 0 0 chr2 114266579 114266625 -138989958 + (CA)n Simple_repeat Simple_repeat 2 47 0 5162 157 48 16 chr2 114266625 114266827 -138989756 + L1PA16 LINE L1 4372 4566 -1600 1715 163 13 17 chr2 114266827 114267128 -138989455 - AluJb SINE Alu -12 300 1 5162 157 48 16 chr2 114267128 114268658 -138987925 + L1PA16 LINE L1 4566 6157 -9 2205 96 16 10 chr2 114268702 114269005 -138987578 + AluSx SINE Alu 1 305 -7 24 32 0 0 chr2 114269480 114269511 -138987072 + AT_rich Low_complexity Low_complexity 1 31 0 192 135 0 0 chr2 114270353 114270390 -138986193 + (CAAAAA)n Simple_repeat Simple_repeat 3 39 0 381 338 129 17 chr2 114270746 114271149 -138985434 + L1ME LINE L1 6 453 -5617 551 269 103 49 chr2 114271354 114272135 -138984448 + L1ME LINE L1 525 1313 -4948 2363 92 0 0 chr2 114272140 114272443 -138984140 + AluY SINE Alu 1 303 -8 627 150 40 0 chr2 114272448 114272548 -138984035 + AluSg/x SINE Alu 125 228 -82 1279 230 110 58 chr2 114272567 114273011 -138983572 + L1ME LINE L1 1396 1886 -4375 2169 111 10 0 chr2 114273011 114273299 -138983284 - AluSx SINE Alu -21 291 1 1279 230 110 58 chr2 114273299 114273497 -138983086 + L1ME LINE L1 1886 2072 -4189 523 149 46 0 chr2 114273522 114273609 -138982974 - AluSp SINE Alu -86 217 127 652 137 0 0 chr2 114273610 114273755 -138982828 - AluSg/x SINE Alu 0 341 197 1930 164 10 6 chr2 114273759 114274070 -138982513 + AluSx SINE Alu 1 312 0 1116 228 141 6 chr2 114274081 114274436 -138982147 + L1ME1 LINE L1 5449 5851 -315 316 277 24 0 chr2 114274518 114274601 -138981982 - L1MC4 LINE L1 -1343 6699 6615 183 204 0 0 chr2 114274606 114274650 -138981933 + (TA)n Simple_repeat Simple_repeat 2 45 0 2033 185 161 29 chr2 114274739 114274933 -138981650 + MLT1E3 LTR MaLR 1 168 -456 2105 141 13 3 chr2 114274933 114275237 -138981346 - AluSq SINE Alu -6 307 1 2033 185 161 29 chr2 114275237 114275593 -138980990 + MLT1E3 LTR MaLR 168 624 0 263 338 29 44 chr2 114275668 114275804 -138980779 + L3 LINE CR1 1420 1553 -24 214 255 64 0 chr2 114275772 114275819 -138980764 + MIR3 SINE MIR 149 198 -10 * 1960 147 3 16 chr2 114276123 114276430 -138980153 + AluSx SINE Alu 1 303 -9 2245 121 0 0 chr2 114276690 114276988 -138979595 + AluSx SINE Alu 1 298 -14 2169 105 26 7 chr2 114277011 114277315 -138979268 + AluSx SINE Alu 1 310 -2 2357 99 0 0 chr2 114277917 114278211 -138978372 - AluSg SINE Alu -16 294 1 260 271 86 28 chr2 114278372 114278598 -138977985 - MIR SINE MIR -3 259 16 258 264 116 23 chr2 114278923 114279052 -138977531 - L1MC4 LINE L1 -1873 5935 5795 222 118 0 0 chr2 114279230 114279264 -138977319 + (CA)n Simple_repeat Simple_repeat 1 34 0 2046 130 3 0 chr2 114279396 114279689 -138976894 - AluSx SINE Alu -18 294 1 925 205 0 0 chr2 114280538 114280699 -138975884 - AluJb SINE Alu -16 296 136 2427 75 7 7 chr2 114280836 114281144 -138975439 + AluY SINE Alu 1 308 -3 27 0 0 0 chr2 114281428 114281455 -138975128 + AT_rich Low_complexity Low_complexity 1 27 0 1572 183 25 14 chr2 114281459 114281743 -138974840 - AluJb SINE Alu -25 287 1 2311 108 0 16 chr2 114282556 114282870 -138973713 - AluSp SINE Alu -4 309 1 2126 93 0 107 chr2 114283063 114283408 -138973175 + AluSx SINE Alu 1 308 -4 2417 98 0 0 chr2 114283678 114283983 -138972600 + AluSx SINE Alu 1 305 -7 203 272 173 35 chr2 114284140 114284313 -138972270 + L3 LINE CR1 790 986 -591 362 271 12 60 chr2 114284639 114284805 -138971778 + LTR16B LTR ERVL 233 390 -74 3541 183 86 46 chr2 114285051 114285873 -138970710 - MER21B LTR ERV1 -3 860 6 338 330 135 13 chr2 114285879 114286109 -138970474 - L1MC4 LINE L1 -2275 5533 5276 463 319 85 27 chr2 114286454 114286714 -138969869 + L3 LINE CR1 1301 1575 -2 2343 88 3 7 chr2 114286896 114287201 -138969382 + AluSq SINE Alu 1 304 -9 1032 210 0 15 chr2 114287374 114287602 -138968981 + AluJb SINE Alu 87 311 0 2200 78 7 20 chr2 114287719 114288042 -138968541 - AluY SINE Alu 0 319 1 1442 147 36 4 chr2 114288306 114288383 -138968200 + AluSx SINE Alu 51 124 -188 2620 54 0 10 chr2 114288383 114288697 -138967886 + AluY SINE Alu 1 311 0 1442 147 36 4 chr2 114288697 114288870 -138967713 + AluSx SINE Alu 124 309 -3 180 125 0 0 chr2 114288877 114288909 -138967674 + (GGGGA)n Simple_repeat Simple_repeat 5 36 0 230 0 33 0 chr2 114288910 114288940 -138967643 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 2030 88 22 4 chr2 114288948 114289220 -138967363 + AluY SINE Alu 1 277 -34 1880 127 0 0 chr2 114289742 114290001 -138966582 + AluSq SINE Alu 53 311 -2 241 211 0 0 chr2 114291528 114291566 -138965017 - AluJ/monomer SINE Alu -270 38 1 1738 106 113 0 chr2 114292190 114292446 -138964137 + AluSg SINE Alu 20 304 -6 474 242 75 0 chr2 114292565 114292685 -138963898 - FLAM_A SINE Alu -1 141 13 1106 238 135 69 chr2 114292693 114292796 -138963787 - HAL1 LINE L1 -135 2372 2277 2173 62 29 4 chr2 114292796 114293101 -138963482 - AluY SINE Alu 0 312 1 1106 238 135 69 chr2 114293101 114293282 -138963301 - HAL1 LINE L1 -230 2277 2109 811 50 0 0 chr2 114293282 114293383 -138963200 - L1PA2 LINE L1 0 6155 6055 1106 238 135 69 chr2 114293383 114293776 -138962807 - HAL1 LINE L1 -398 2109 1625 1604 114 4 4 chr2 114293776 114294003 -138962580 - AluSg/x SINE Alu -8 302 76 1106 238 135 69 chr2 114294003 114294160 -138962423 - HAL1 LINE L1 -882 1625 1480 348 190 288 27 chr2 114294182 114294366 -138962217 - HAL1 LINE L1 -1163 1344 1113 258 306 59 0 chr2 114294848 114294933 -138961650 + MIR3 SINE MIR 65 154 -54 1708 110 118 0 chr2 114295150 114295405 -138961178 + AluSc SINE Alu 4 288 -21 273 157 0 20 chr2 114295491 114295542 -138961041 - AluSc SINE Alu -5 294 245 396 212 22 29 chr2 114295565 114295702 -138960881 - L1M4 LINE L1 -1673 4473 4338 4226 169 13 6 chr2 114295702 114296399 -138960184 + MER44D DNA MER2_type 1 574 -31 2079 126 14 0 chr2 114296471 114296764 -138959819 - AluSx SINE Alu -15 297 1 1262 220 13 37 chr2 114297167 114297467 -138959116 - AluJo SINE Alu -19 293 1 378 0 0 0 chr2 114297472 114297514 -138959069 + (ATG)n Simple_repeat Simple_repeat 1 42 0 1990 95 17 58 chr2 114297519 114297813 -138958770 - AluSx SINE Alu -30 282 1 1387 191 7 30 chr2 114298530 114298833 -138957750 - AluJo SINE Alu -16 296 1 452 203 49 55 chr2 114301010 114301118 -138955465 - L1MD3 LINE L1 -2 7993 7885 1473 127 40 4 chr2 114301118 114301346 -138955237 + MER46A DNA MER2_type 1 236 0 452 203 49 55 chr2 114301346 114301400 -138955183 - L1MD3 LINE L1 -110 7885 7832 * 634 229 102 34 chr2 114301399 114301635 -138954948 - L1MD2 LINE L1 -214 6145 5894 405 170 137 20 chr2 114301653 114301806 -138954777 - AluSp SINE Alu -28 285 115 1440 132 9 9 chr2 114301965 114302184 -138954399 + AluSg/x SINE Alu 72 290 -22 209 33 33 0 chr2 114302193 114302223 -138954360 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 232 224 103 19 chr2 114302829 114302936 -138953647 + MER113 DNA MER1_type? 3 118 -403 418 254 61 24 chr2 114303094 114303259 -138953324 - MIR SINE MIR -78 184 14 1912 276 72 2 chr2 114303640 114304169 -138952414 + MLT1G1 LTR MaLR 25 590 -5 23 33 0 0 chr2 114304191 114304221 -138952362 + AT_rich Low_complexity Low_complexity 1 30 0 2301 94 7 0 chr2 114304221 114304518 -138952065 - AluSg SINE Alu -10 300 2 521 162 162 29 chr2 114304545 114304650 -138951933 + MER63 DNA MER1_type 1 745 -91 330 171 200 0 chr2 114304657 114304727 -138951856 + MER63 DNA MER1_type 979 1062 0 2123 125 0 16 chr2 114305132 114305443 -138951140 + AluSx SINE Alu 1 306 -6 1909 113 55 71 chr2 114305536 114305917 -138950666 - THE1C LTR MaLR 0 375 1 1304 204 74 24 chr2 114306330 114306544 -138950039 - MLT1A1 LTR MaLR 0 365 126 2461 90 3 0 chr2 114306544 114306855 -138949728 - AluSp SINE Alu -1 312 1 1304 204 74 24 chr2 114306855 114306979 -138949604 - MLT1A1 LTR MaLR -239 126 10 2339 100 0 6 chr2 114307149 114307460 -138949123 - AluSg SINE Alu -1 309 1 657 86 0 11 chr2 114307461 114307554 -138949029 - AluS SINE Alu -220 93 2 1905 146 0 52 chr2 114307596 114307925 -138948658 - AluJb SINE Alu 0 312 1 1709 112 42 4 chr2 114308248 114308489 -138948094 - AluSg SINE Alu -14 296 47 3440 247 64 11 chr2 114308979 114309345 -138947238 + L1M4 LINE L1 3771 4116 -2030 1636 169 13 62 chr2 114309345 114309653 -138946930 + AluJb SINE Alu 8 300 -12 2123 118 0 23 chr2 114309657 114309961 -138946622 + AluSx SINE Alu 1 297 -15 3440 247 64 11 chr2 114309961 114310624 -138945959 + L1M4 LINE L1 4118 4860 -1286 3880 137 6 2 chr2 114310632 114311253 -138945330 - L1MA5 LINE L1 0 6300 5677 21 0 0 0 chr2 114311394 114311415 -138945168 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 114312589 114312610 -138943973 + AT_rich Low_complexity Low_complexity 1 21 0 2525 145 14 17 chr2 114313311 114314082 -138942501 - L1MA5 LINE L1 -613 5687 4913 2430 82 16 0 chr2 114314082 114314387 -138942196 - AluSp SINE Alu -3 310 1 355 161 0 32 chr2 114314388 114314481 -138942102 - L1MA5 LINE L1 -2808 3338 3249 * 6401 169 38 8 chr2 114314463 114315705 -138940878 - L1 LINE L1 -942 5204 3926 2470 81 0 7 chr2 114315747 114316054 -138940529 - AluSc SINE Alu -4 305 1 747 240 65 63 chr2 114316057 114316621 -138939962 + L1MD1 LINE L1 2429 3412 -2734 21 0 0 0 chr2 114316796 114316817 -138939766 + AT_rich Low_complexity Low_complexity 1 21 0 2228 125 0 0 chr2 114317451 114317755 -138938828 + AluSc SINE Alu 1 304 -5 2015 104 101 0 chr2 114317989 114318267 -138938316 - AluSx SINE Alu -5 307 2 584 171 12 104 chr2 114318725 114318889 -138937694 + MER106B DNA MER1_type 1 149 -910 28 71 0 0 chr2 114318917 114318973 -138937610 + AT_rich Low_complexity Low_complexity 1 56 0 262 98 24 0 chr2 114318973 114319014 -138937569 + MER106A DNA MER1_type 195 236 0 21 36 0 0 chr2 114320087 114320115 -138936468 + AT_rich Low_complexity Low_complexity 1 28 0 186 43 0 0 chr2 114320363 114320386 -138936197 + (CAAT)n Simple_repeat Simple_repeat 3 25 0 558 81 0 23 chr2 114320878 114320964 -138935619 + Alu SINE Alu 228 311 0 2241 110 0 3 chr2 114321412 114321704 -138934879 - AluSc SINE Alu -18 291 1 2170 116 3 7 chr2 114321749 114322050 -138934533 + AluSp SINE Alu 1 300 -13 2755 216 70 5 chr2 114322050 114322823 -138933760 + L1MD1 LINE L1 4504 5326 -820 1538 132 0 36 chr2 114322823 114323074 -138933509 + AluJb SINE Alu 32 273 -39 3864 159 64 25 chr2 114323074 114323868 -138932715 + L1MD1 LINE L1 5418 6242 0 321 177 283 35 chr2 114324272 114324385 -138932198 - Charlie1 DNA MER1_type -1 2760 2620 256 213 113 25 chr2 114324378 114324458 -138932125 - Charlie1 DNA MER1_type -2541 220 134 * 21 36 0 0 chr2 114324983 114325011 -138931572 + GC_rich Low_complexity Low_complexity 1 28 0 26 64 0 0 chr2 114325589 114325636 -138930947 + GC_rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr2 114325935 114325956 -138930627 + GC_rich Low_complexity Low_complexity 1 21 0 2155 101 14 3 chr2 114329037 114329334 -138927249 + AluSx SINE Alu 1 300 -12 22 0 0 0 chr2 114329782 114329804 -138926779 + AT_rich Low_complexity Low_complexity 1 22 0 237 226 19 0 chr2 114331427 114331480 -138925103 + L2 LINE L2 3214 3267 -5 2165 102 7 0 chr2 114331721 114332024 -138924559 + AluSx SINE Alu 2 306 -6 498 317 154 13 chr2 114332050 114332277 -138924306 + L3 LINE CR1 1223 1481 -96 2046 92 3 7 chr2 114332449 114332741 -138923842 - AluSc SINE Alu -7 302 12 1936 127 0 3 chr2 114332932 114333246 -138923337 + AluSg SINE Alu 1 313 0 449 307 66 57 chr2 114333385 114333597 -138922986 - MIR SINE MIR -24 238 25 2030 117 3 0 chr2 114334145 114334455 -138922128 + AluSx SINE Alu 1 311 0 199 325 125 38 chr2 114335489 114335649 -138920934 - L2 LINE L2 -455 2859 2686 294 301 59 26 chr2 114335874 114336027 -138920556 + L1MC4a LINE L1 5482 5639 -482 1972 107 16 35 chr2 114336095 114336414 -138920169 + AluSq SINE Alu 1 313 0 209 204 61 0 chr2 114336428 114336477 -138920106 + MER5A DNA MER1_type 61 112 -77 363 284 51 51 chr2 114336523 114336669 -138919914 + L1MC4a LINE L1 5679 5824 -1984 2144 90 0 43 chr2 114336669 114336991 -138919592 + AluSc SINE Alu 1 308 -1 363 284 51 51 chr2 114336991 114337136 -138919447 + L1MC4a LINE L1 5823 5970 -1838 1873 117 43 3 chr2 114337494 114337801 -138918782 + AluSx SINE Alu 1 318 0 750 222 60 12 chr2 114338318 114338485 -138918098 + FAM SINE Alu 1 175 0 2016 123 0 0 chr2 114338508 114338792 -138917791 - AluSx SINE Alu -27 285 2 1308 252 90 21 chr2 114338799 114339275 -138917308 - L1ME3A LINE L1 -5 6165 5657 1946 142 0 0 chr2 114339508 114339840 -138916743 + AluSx SINE Alu 1 332 0 1980 113 7 0 chr2 114340218 114340535 -138916048 + AluSx SINE Alu 1 319 0 486 0 0 0 chr2 114340599 114340653 -138915930 + (TA)n Simple_repeat Simple_repeat 2 55 0 2103 125 0 0 chr2 114340827 114341122 -138915461 + AluSg SINE Alu 1 295 -15 183 184 0 0 chr2 114341466 114341504 -138915079 + (TA)n Simple_repeat Simple_repeat 2 39 0 1194 257 48 36 chr2 114341529 114341986 -138914597 + MER74B LTR ERVL 78 540 -20 2016 101 29 10 chr2 114342080 114342387 -138914196 + AluSq SINE Alu 1 313 0 2232 105 0 0 chr2 114342770 114343076 -138913507 + AluSq SINE Alu 1 306 -7 914 261 59 64 chr2 114343099 114343489 -138913094 + MER21B LTR ERV1 13 400 -463 751 215 50 69 chr2 114343511 114343772 -138912811 + MER21A LTR ERV1 550 805 -126 2060 80 3 28 chr2 114343828 114344151 -138912432 + AluSg SINE Alu 1 316 0 1941 109 3 7 chr2 114344406 114344725 -138911858 + AluSx SINE Alu 1 318 0 2222 116 0 0 chr2 114345136 114345446 -138911137 + AluSg SINE Alu 1 310 0 493 260 72 69 chr2 114345477 114345866 -138910717 + L1MEc LINE L1 1290 1679 -4717 2176 112 0 10 chr2 114346465 114346779 -138909804 - AluSx SINE Alu -1 311 1 2234 158 14 0 chr2 114347183 114347543 -138909040 + MLT1A1 LTR MaLR 1 365 0 1797 222 98 42 chr2 114347625 114347952 -138908631 + L1MC4 LINE L1 7406 7780 -262 2039 115 0 22 chr2 114347952 114348134 -138908449 + AluSx SINE Alu 1 175 -137 3296 195 20 64 chr2 114348134 114349148 -138907435 - LTR5 LTR ERVK 0 969 1 2039 115 0 22 chr2 114349148 114349278 -138907305 + AluSx SINE Alu 175 306 -6 1797 222 98 42 chr2 114349278 114349522 -138907061 + L1MC4 LINE L1 7780 8009 -33 2196 104 7 0 chr2 114350635 114350942 -138905641 + AluSc SINE Alu 1 309 0 2104 113 7 0 chr2 114351013 114351305 -138905278 - AluSx SINE Alu -18 294 1 1999 111 4 0 chr2 114351465 114351765 -138904818 + AluSx SINE Alu 1 301 0 246 108 27 0 chr2 114352359 114352396 -138904187 + L1MB3 LINE L1 5638 5675 -508 985 134 0 0 chr2 114352420 114352594 -138903989 - AluSg SINE Alu 0 311 138 2125 153 25 8 chr2 114352595 114352962 -138903621 + L1MB3 LINE L1 5698 6070 -113 295 184 10 112 chr2 114352961 114353059 -138903524 - L1MC5 LINE L1 -398 7563 7476 * 1964 117 7 0 chr2 114353103 114353386 -138903197 - AluSq SINE Alu -16 297 13 827 126 31 0 chr2 114353390 114353517 -138903066 - AluSg SINE Alu -179 131 1 225 63 0 5 chr2 114353762 114353967 -138902616 + AluY SINE Alu 1 301 0 1749 150 3 48 chr2 114354187 114354501 -138902082 + AluJo SINE Alu 1 300 -12 1522 52 5 0 chr2 114354581 114354772 -138901811 + MER41B LTR ERV1 1 192 -443 2080 113 0 16 chr2 114354772 114355083 -138901500 + AluSx SINE Alu 1 306 -6 350 154 0 0 chr2 114355083 114355135 -138901448 + LTR8 LTR ERV1 526 577 -114 2248 100 0 0 chr2 114355135 114355445 -138901138 + AluY SINE Alu 1 310 -1 1160 98 6 0 chr2 114355448 114355611 -138900972 + AluSg/x SINE Alu 129 292 -20 758 172 0 0 chr2 114355613 114355735 -138900848 + LTR8 LTR ERV1 570 691 0 220 303 0 0 chr2 114355735 114355801 -138900782 - L2 LINE L2 -1098 2216 2151 393 287 140 12 chr2 114356924 114357088 -138899495 + MIR SINE MIR 24 208 -54 796 206 64 36 chr2 114357519 114357738 -138898845 - MER96B DNA MER1_type? -3 414 190 1985 107 0 45 chr2 114357785 114358093 -138898490 - AluSx SINE Alu -18 294 1 2353 92 0 0 chr2 114358443 114358749 -138897834 - AluSc SINE Alu -3 306 1 2163 97 0 3 chr2 114358759 114359057 -138897526 - AluSx SINE Alu -15 297 1 225 312 110 68 chr2 114359419 114359650 -138896933 - L2 LINE L2 -355 2959 2739 1887 114 39 0 chr2 114359650 114359930 -138896653 - AluSq SINE Alu -22 291 1 1861 118 0 0 chr2 114359940 114360211 -138896372 - AluSg SINE Alu -11 299 29 225 312 110 68 chr2 114360211 114360333 -138896250 - L2 LINE L2 -583 2731 2580 2345 88 0 0 chr2 114360678 114360985 -138895598 - AluSx SINE Alu -5 307 1 411 270 124 13 chr2 114361513 114361746 -138894837 - LTR33A LTR ERVL -44 479 221 265 281 50 65 chr2 114361782 114361835 -138894748 - LTR33 LTR ERVL -336 185 133 2144 131 36 28 chr2 114361835 114362195 -138894388 + THE1B LTR MaLR 1 363 -1 265 281 50 65 chr2 114362195 114362280 -138894303 - LTR33 LTR ERVL -388 133 49 487 212 40 23 chr2 114362452 114362571 -138894012 - ERVL LTR ERVL -699 4786 4681 1465 312 104 35 chr2 114362682 114363506 -138893077 + MERVL LTR ERVL 3544 4437 -1048 2251 56 0 11 chr2 114363506 114363792 -138892791 - AluY SINE Alu -7 304 22 1465 312 104 35 chr2 114363792 114363871 -138892712 + MERVL LTR ERVL 4437 4509 -976 570 277 21 10 chr2 114363892 114364089 -138892494 - ERVL LTR ERVL -2206 3487 3251 383 302 24 8 chr2 114364084 114364210 -138892373 - ERVL LTR ERVL -3707 2057 1930 * 1989 129 0 0 chr2 114364403 114364697 -138891886 + AluSg SINE Alu 1 294 -16 657 325 11 45 chr2 114364857 114365143 -138891440 - ERVL LTR ERVL -4342 1422 1147 257 321 36 9 chr2 114365383 114365495 -138891088 - ERVL LTR ERVL -5064 700 586 188 309 88 0 chr2 114366105 114366173 -138890410 + MIR SINE MIR 72 145 -117 2237 104 0 0 chr2 114366181 114366489 -138890094 - AluSg SINE Alu -2 308 1 212 152 0 43 chr2 114366931 114366977 -138889606 + A-rich Low_complexity Low_complexity 3 46 0 521 222 52 12 chr2 114367138 114367289 -138889294 + MIR SINE MIR 36 199 -9 2063 125 0 7 chr2 114367625 114367928 -138888655 - AluSx SINE Alu -11 301 1 1564 162 0 8 chr2 114368486 114368751 -138887832 + AluJb SINE Alu 35 297 -15 1939 125 3 0 chr2 114369093 114369381 -138887202 - AluSx SINE Alu -23 289 1 2127 95 7 3 chr2 114369528 114369822 -138886761 + AluSg1 SINE Alu 1 295 -14 819 109 0 44 chr2 114370006 114370143 -138886440 + AluSg SINE Alu 1 131 -179 1986 122 0 17 chr2 114370146 114370441 -138886142 + AluSg SINE Alu 1 290 -20 1849 143 19 13 chr2 114370455 114370763 -138885820 + AluSx SINE Alu 1 310 -2 2705 141 200 28 chr2 114371361 114371902 -138884681 + MER51A LTR ERV1 1 634 0 205 272 198 0 chr2 114372053 114372134 -138884449 + MIR SINE MIR 56 152 -110 1026 264 66 34 chr2 114372355 114372606 -138883977 - MLT1J1 LTR MaLR -4 442 173 2235 94 0 3 chr2 114372606 114372905 -138883678 - AluSg SINE Alu -12 298 1 1026 264 66 34 chr2 114372905 114373080 -138883503 - MLT1J1 LTR MaLR -273 173 5 409 308 111 10 chr2 114373094 114373302 -138883281 + L2 LINE L2 2286 2514 -800 1081 247 119 3 chr2 114373304 114373632 -138882951 + LTR16B LTR ERVL 2 367 -97 1318 118 0 0 chr2 114373642 114373828 -138882755 - AluSq SINE Alu -9 304 119 924 127 63 0 chr2 114373928 114374070 -138882513 - AluSq/x SINE Alu -161 151 1 381 219 0 52 chr2 114374070 114374166 -138882417 + LTR16B LTR ERVL 370 460 -4 327 290 151 88 chr2 114374488 114374726 -138881857 + L2 LINE L2 2934 3186 -86 278 280 68 34 chr2 114374738 114374856 -138881727 - L2 LINE L2 -3 3310 3189 316 307 0 40 chr2 114375581 114375682 -138880901 - HAL1b LINE L1 -46 1302 1206 1706 143 0 0 chr2 114375683 114375948 -138880635 + AluSg SINE Alu 1 265 -45 186 43 0 0 chr2 114375964 114375987 -138880596 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2015 136 0 13 chr2 114376007 114376324 -138880259 + AluSq SINE Alu 1 313 0 2218 108 14 0 chr2 114376703 114377000 -138879583 - AluSp SINE Alu -12 301 1 2005 115 11 4 chr2 114377192 114377471 -138879112 + AluSq SINE Alu 1 281 -32 189 0 0 0 chr2 114377471 114377492 -138879091 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 21 57 0 0 chr2 114379631 114379666 -138876917 + AT_rich Low_complexity Low_complexity 1 35 0 1960 240 75 29 chr2 114380270 114380921 -138875662 + L1 LINE L1 4684 5364 -782 586 215 114 14 chr2 114381160 114381379 -138875204 - HSREP522 Satellite telomeric -262 242 2 375 301 98 15 chr2 114381635 114381675 -138874908 + HSREP522 Satellite telomeric 38 73 -431 180 0 0 0 chr2 114381675 114381695 -138874888 + (TGGGGG)n Simple_repeat Simple_repeat 6 25 0 375 301 98 15 chr2 114381695 114381920 -138874663 + HSREP522 Satellite telomeric 73 325 -179 269 297 8 23 chr2 114383273 114383401 -138873182 + CT-rich Low_complexity Low_complexity 1 126 0 310 339 0 32 chr2 114383903 114384027 -138872556 - L1M4 LINE L1 -2826 3320 3201 220 223 129 41 chr2 114384499 114384660 -138871923 + MIR SINE MIR 9 187 -21 1347 176 9 0 chr2 114384676 114384909 -138871674 + MER41-int LTR ERV1 2120 2354 -3592 1211 105 0 0 chr2 114384945 114385098 -138871485 + AluSq SINE Alu 1 153 -160 894 228 29 52 chr2 114385143 114385450 -138871133 - L1ME LINE L1 -582 5582 5283 1213 266 70 27 chr2 114385552 114385683 -138870900 - HAL1b LINE L1 -224 1124 1000 1484 174 14 44 chr2 114385683 114385976 -138870607 + AluJo SINE Alu 29 312 0 1213 266 70 27 chr2 114385976 114386333 -138870250 - HAL1b LINE L1 -348 1000 615 1255 128 15 30 chr2 114386338 114386541 -138870042 - AluJo SINE Alu -17 295 96 339 266 73 9 chr2 114386549 114386658 -138869925 - HAL1b LINE L1 -741 607 492 2415 105 0 6 chr2 114386763 114387078 -138869505 + AluSq SINE Alu 1 313 0 276 274 78 39 chr2 114389582 114389735 -138866848 + L2 LINE L2 3155 3313 0 1741 212 45 5 chr2 114390785 114391182 -138865401 + MER82 DNA MER2_type 235 647 -6 234 235 85 105 chr2 114391466 114391619 -138864964 + MER5A DNA MER1_type 40 189 0 222 36 0 109 chr2 114391803 114391832 -138864751 + (TAAAA)n Simple_repeat Simple_repeat 2 24 -26 2319 62 6 91 chr2 114391832 114392171 -138864412 + AluY SINE Alu 1 310 -1 222 36 0 109 chr2 114392171 114392196 -138864387 + (TAAAA)n Simple_repeat Simple_repeat 24 50 0 239 309 134 0 chr2 114392233 114392330 -138864253 + MIR SINE MIR 79 188 -74 1154 272 166 22 chr2 114392549 114393186 -138863397 + L1ME3A LINE L1 5431 6161 -9 258 373 9 9 chr2 114393694 114393804 -138862779 - MER5A DNA MER1_type -7 182 73 660 209 61 0 chr2 114394011 114394159 -138862424 + MER53 DNA DNA 20 176 -13 256 227 67 0 chr2 114394252 114394327 -138862256 + MER34 LTR ERV1 24 103 -439 614 223 9 0 chr2 114394431 114394543 -138862040 + FLAM_C SINE Alu 6 118 -25 880 220 118 73 chr2 114394571 114394778 -138861805 + LTR48B LTR ERV1 243 476 -168 2250 112 0 0 chr2 114394778 114395074 -138861509 - AluSx SINE Alu -16 296 1 880 220 118 73 chr2 114395074 114395238 -138861345 + LTR48B LTR ERV1 476 631 -13 2131 113 7 3 chr2 114395720 114396011 -138860572 - AluSx SINE Alu -20 292 1 2280 103 0 0 chr2 114396015 114396306 -138860277 - AluSg1 SINE Alu -16 293 3 2208 108 3 3 chr2 114396308 114396603 -138859980 - AluSx SINE Alu -17 295 1 180 0 0 0 chr2 114396622 114396642 -138859941 + (TTAAA)n Simple_repeat Simple_repeat 5 24 0 2170 108 3 3 chr2 114396654 114396942 -138859641 - AluSx SINE Alu -24 288 1 767 284 94 31 chr2 114396942 114397262 -138859321 - L1MC/D LINE L1 -1984 5824 5485 2321 89 0 0 chr2 114398089 114398382 -138858201 - AluSg SINE Alu -17 293 1 1736 177 35 3 chr2 114398390 114398672 -138857911 - AluJb SINE Alu -21 291 1 812 196 39 0 chr2 114399061 114399240 -138857343 - L1MD3 LINE L1 -1060 6935 6750 430 293 184 0 chr2 114399251 114399507 -138857076 - L1MC4a LINE L1 -1220 6588 6286 1422 140 0 18 chr2 114399511 114399732 -138856851 - AluJb SINE Alu -11 301 85 2402 87 0 16 chr2 114400265 114400577 -138856006 + AluSc SINE Alu 2 308 -1 393 22 0 0 chr2 114400646 114400692 -138855891 + (TTCC)n Simple_repeat Simple_repeat 3 48 0 2154 103 10 0 chr2 114400692 114400976 -138855607 - AluSq SINE Alu -23 290 1 1745 99 11 82 chr2 114401851 114402223 -138854360 - MER4A LTR ERV1 0 664 261 625 131 0 10 chr2 114402223 114402322 -138854261 - MER4A LTR ERV1 -566 98 1 2385 90 0 3 chr2 114403551 114403851 -138852732 - AluSg SINE Alu -11 299 1 913 241 24 21 chr2 114403951 114404241 -138852342 + L1MB7 LINE L1 5878 6168 -16 1278 96 0 0 chr2 114404575 114404742 -138851841 - AluSq SINE Alu 0 313 147 1075 85 0 125 chr2 114404742 114404942 -138851641 + MER4B LTR ERV1 115 289 -321 1862 119 73 7 chr2 114404942 114405228 -138851355 - AluSx SINE Alu -7 305 1 1426 148 49 46 chr2 114405235 114405519 -138851064 + THE1B LTR MaLR 80 364 0 1055 133 77 11 chr2 114405519 114405699 -138850884 + MER4A LTR ERV1 473 664 0 533 171 0 0 chr2 114405699 114405787 -138850796 - Tigger1 DNA MER2_type -2330 88 1 2046 130 49 0 chr2 114405829 114406176 -138850407 + MSTA LTR MaLR 1 364 -64 922 97 0 0 chr2 114406176 114406289 -138850294 - AluSc SINE Alu -14 295 183 374 132 171 0 chr2 114406290 114406362 -138850221 + MER46A DNA MER2_type 139 223 -13 237 167 0 0 chr2 114406362 114406404 -138850179 - MSTA LTR MaLR 0 428 387 871 135 0 0 chr2 114406418 114406551 -138850032 - MER46A DNA MER2_type -103 133 1 351 0 0 0 chr2 114406571 114406610 -138849973 + (TG)n Simple_repeat Simple_repeat 2 40 0 1993 224 57 7 chr2 114406614 114407248 -138849335 - L1MDb LINE L1 -4938 1602 951 257 349 64 6 chr2 114407505 114407677 -138848906 - L1MDb LINE L1 -6082 458 277 220 273 18 0 chr2 114407678 114407733 -138848850 + CT-rich Low_complexity Low_complexity 2 57 0 2132 125 0 3 chr2 114407735 114408031 -138848552 - AluSg SINE Alu -15 295 1 2919 231 71 35 chr2 114408031 114408555 -138848028 - L1M4 LINE L1 -1073 5073 4570 2126 144 0 0 chr2 114408555 114408840 -138847743 - AluJo SINE Alu -21 291 7 2919 231 71 35 chr2 114408840 114408976 -138847607 - L1M4 LINE L1 -1576 4570 4440 2398 88 17 0 chr2 114408976 114409270 -138847313 + AluSp SINE Alu 1 299 -14 2919 231 71 35 chr2 114409270 114409621 -138846962 - L1M4 LINE L1 -1706 4440 4024 2340 104 7 0 chr2 114409627 114409926 -138846657 - AluSx SINE Alu -11 301 1 492 195 44 9 chr2 114409926 114410039 -138846544 - L1MEc LINE L1 -5234 1162 1046 1265 115 0 27 chr2 114410085 114410268 -138846315 + AluSg/x SINE Alu 132 309 -1 456 252 23 39 chr2 114410279 114410537 -138846046 - L1MEc LINE L1 -5398 998 745 1052 100 62 38 chr2 114410544 114410704 -138845879 + AluSg/x SINE Alu 132 295 -17 620 271 114 83 chr2 114410709 114411085 -138845498 - L1MEc LINE L1 -5657 739 333 2454 152 13 42 chr2 114411085 114411532 -138845051 - Tigger2a DNA MER2_type 0 434 1 620 271 114 83 chr2 114411532 114411805 -138844778 - L1MEc LINE L1 -6063 333 70 1404 123 36 89 chr2 114412000 114412365 -138844218 - MER4A LTR ERV1 0 664 261 539 144 21 10 chr2 114412365 114412462 -138844121 - MER4A LTR ERV1 -566 98 1 4000 92 63 7 chr2 114413036 114413604 -138842979 - MER4A LTR ERV1 0 600 1 2413 95 0 9 chr2 114415181 114415496 -138841087 - AluSx SINE Alu 0 312 1 1820 137 72 10 chr2 114416035 114416327 -138840256 + AluJb SINE Alu 1 310 -2 2296 102 0 3 chr2 114416335 114416628 -138839955 + AluSq SINE Alu 1 292 -21 274 136 0 0 chr2 114416798 114416885 -138839698 + Alu SINE Alu 239 325 0 2204 128 0 3 chr2 114416890 114417196 -138839387 + AluSp SINE Alu 1 305 -8 845 307 133 35 chr2 114417609 114418502 -138838081 + L2 LINE L2 2313 3300 -13 213 39 0 0 chr2 114418511 114418537 -138838046 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 1555 123 90 97 chr2 114419842 114420142 -138836441 + AluJb SINE Alu 1 298 -14 1783 157 28 3 chr2 114420142 114420429 -138836154 + AluJb SINE Alu 1 294 -18 2091 124 3 10 chr2 114420461 114420784 -138835799 + AluSx SINE Alu 1 312 0 1478 108 0 16 chr2 114420787 114420981 -138835602 + AluSp SINE Alu 1 191 -122 1713 132 8 8 chr2 114420981 114421238 -138835345 - AluSx SINE Alu -55 257 1 381 22 0 0 chr2 114421260 114421306 -138835277 + (CA)n Simple_repeat Simple_repeat 2 47 0 2222 119 7 0 chr2 114421332 114421634 -138834949 + AluSx SINE Alu 1 304 -8 435 214 40 40 chr2 114422178 114422304 -138834279 + L2 LINE L2 3173 3298 -15 6147 121 38 5 chr2 114422885 114423913 -138832670 + L1PA11 LINE L1 4434 5524 -650 2163 127 13 7 chr2 114423913 114424220 -138832363 + AluSx SINE Alu 1 309 -3 6147 121 38 5 chr2 114424220 114424894 -138831689 + L1PA11 LINE L1 5524 6174 0 234 282 94 0 chr2 114426593 114426678 -138829905 + MIR3 SINE MIR 86 178 -30 594 259 16 54 chr2 114426809 114426994 -138829589 - MER5B DNA MER1_type 0 178 1 243 61 0 0 chr2 114427054 114427066 -138829517 + (TG)n Simple_repeat Simple_repeat 1 45 0 243 61 0 0 chr2 114427066 114427099 -138829484 + (TG)n Simple_repeat Simple_repeat 2 34 0 2222 115 0 0 chr2 114427657 114427952 -138828631 + AluSc SINE Alu 1 295 -14 2382 89 0 10 chr2 114427962 114428264 -138828319 + AluSp SINE Alu 1 299 -14 3286 158 34 64 chr2 114428264 114428323 -138828260 - L1MB8 LINE L1 -20 6158 6099 2133 88 9 94 chr2 114428323 114428664 -138827919 - AluSx SINE Alu 0 312 1 3286 158 34 64 chr2 114428664 114429311 -138827272 - L1MB8 LINE L1 -79 6099 5473 1325 265 33 339 chr2 114429294 114429422 -138827161 - L1MB8 LINE L1 -1637 4509 4344 * 2239 123 3 0 chr2 114429422 114429730 -138826853 - AluSq SINE Alu -4 309 1 1325 265 33 339 chr2 114429730 114429741 -138826842 - L1MB8 LINE L1 -1802 4344 4331 2326 85 0 0 chr2 114429741 114430058 -138826525 - AluSq SINE Alu 0 321 5 1325 265 33 339 chr2 114430058 114430326 -138826257 - L1MB8 LINE L1 -1815 4331 3983 2635 77 92 96 chr2 114430326 114430513 -138826070 + MER4C LTR ERV1 1 187 -278 1910 155 0 10 chr2 114430513 114430809 -138825774 + AluJb SINE Alu 1 293 -19 2281 96 3 25 chr2 114430812 114431126 -138825457 + AluSg SINE Alu 1 307 -3 2635 77 92 96 chr2 114431126 114431401 -138825182 + MER4C LTR ERV1 189 465 0 1325 265 33 339 chr2 114431401 114431472 -138825111 - L1MB8 LINE L1 -2162 3984 4078 2304 193 27 9 chr2 114431483 114431972 -138824611 + MER21B LTR ERV1 1 556 -307 722 135 0 0 chr2 114431986 114432090 -138824493 + AluJb SINE Alu 33 136 -176 2032 120 11 0 chr2 114432095 114432370 -138824213 + AluSq SINE Alu 1 278 -35 1985 140 13 3 chr2 114432452 114432759 -138823824 + AluSx SINE Alu 3 312 0 2275 110 0 0 chr2 114432762 114433061 -138823522 + AluSc SINE Alu 4 302 -7 913 198 0 36 chr2 114433066 114433079 -138823504 + AluJb SINE Alu 120 132 -180 225 0 0 0 chr2 114433079 114433104 -138823479 + (CA)n Simple_repeat Simple_repeat 2 26 0 913 198 0 36 chr2 114433104 114433282 -138823301 + AluJb SINE Alu 132 304 -8 1109 186 121 0 chr2 114433301 114433516 -138823067 + MER21B LTR ERV1 604 844 -19 448 203 7 128 chr2 114433520 114433668 -138822915 - L1MB8 LINE L1 -2073 4073 3944 223 282 118 9 chr2 114434034 114434144 -138822439 - MER5A DNA MER1_type -6 183 62 834 184 70 66 chr2 114434456 114434627 -138821956 - ORSL DNA AcHobo -30 245 71 2214 106 0 7 chr2 114434627 114434930 -138821653 + AluSg SINE Alu 1 301 -9 834 184 70 66 chr2 114434930 114435002 -138821581 - ORSL DNA AcHobo -204 71 1 326 302 155 37 chr2 114435672 114436367 -138820216 - L2 LINE L2 -373 2941 2165 2164 119 3 0 chr2 114436961 114437256 -138819327 - AluSx SINE Alu -16 296 1 2254 112 3 0 chr2 114437256 114437549 -138819034 - AluSx SINE Alu -16 296 2 534 256 72 14 chr2 114437677 114437884 -138818699 - MIR SINE MIR -14 248 30 2223 109 0 16 chr2 114437962 114438335 -138818248 - AluSp SINE Alu 0 313 1 2066 124 3 10 chr2 114438338 114438661 -138817922 - AluSx SINE Alu 0 312 1 1758 157 28 3 chr2 114438693 114438980 -138817603 - AluJb SINE Alu -18 294 1 1532 121 91 98 chr2 114438983 114439280 -138817303 - AluJb SINE Alu -17 295 1 213 39 0 0 chr2 114440585 114440611 -138815972 + (TTCA)n Simple_repeat Simple_repeat 2 27 0 697 297 136 32 chr2 114440620 114441511 -138815072 - L2 LINE L2 -13 3300 2313 2174 128 0 3 chr2 114441925 114442231 -138814352 - AluSp SINE Alu -8 305 1 287 136 0 0 chr2 114442236 114442323 -138814260 - Alu SINE Alu 0 325 239 2277 102 0 3 chr2 114442493 114442786 -138813797 - AluSq SINE Alu -21 292 1 1784 130 72 17 chr2 114442794 114443086 -138813497 - AluJb SINE Alu -4 308 1 2391 95 0 9 chr2 114443625 114443940 -138812643 + AluSx SINE Alu 1 312 0 3984 92 63 7 chr2 114445518 114446086 -138810497 + MER4A LTR ERV1 1 600 0 573 144 21 10 chr2 114446660 114446757 -138809826 + MER4A LTR ERV1 1 98 -566 1497 123 36 89 chr2 114446757 114447122 -138809461 + MER4A LTR ERV1 261 664 0 722 259 123 83 chr2 114447317 114447590 -138808993 + L1MEc LINE L1 64 325 -6071 2443 152 13 42 chr2 114447590 114448037 -138808546 + Tigger2a DNA MER2_type 1 434 0 722 259 123 83 chr2 114448037 114448413 -138808170 + L1MEc LINE L1 325 739 -5657 1040 94 62 38 chr2 114448418 114448578 -138808005 - AluSg/x SINE Alu -17 295 132 515 248 23 39 chr2 114448585 114448843 -138807740 + L1MEc LINE L1 745 998 -5398 2230 106 16 16 chr2 114448854 114449165 -138807418 - AluSx SINE Alu -1 311 1 2299 76 6 38 chr2 114449850 114450165 -138806418 + AluY SINE Alu 1 305 -6 1846 156 39 9 chr2 114450239 114450573 -138806010 + L1MB8 LINE L1 5820 6163 -15 2064 112 0 35 chr2 114451851 114452163 -138804420 + AluSx SINE Alu 4 304 -8 2004 136 19 26 chr2 114452167 114452475 -138804108 + AluJb SINE Alu 1 306 -6 333 345 150 12 chr2 114452780 114453026 -138803557 + L3 LINE CR1 1209 1488 -89 654 266 139 51 chr2 114453080 114453553 -138803030 + L1MC4a LINE L1 5520 6034 -1774 331 298 42 48 chr2 114453903 114453948 -138802635 - L3 LINE CR1 -1037 540 496 2229 109 3 10 chr2 114453948 114454251 -138802332 - AluSx SINE Alu -11 301 1 331 298 42 48 chr2 114454251 114454373 -138802210 - L3 LINE CR1 -1081 496 374 1747 145 7 31 chr2 114454794 114455083 -138801500 + AluJo SINE Alu 1 282 -30 299 159 0 0 chr2 114455109 114455153 -138801430 + Alu SINE Alu 1 44 -257 434 182 39 0 chr2 114455154 114455231 -138801352 + AluJo/FRAM SINE Alu 198 277 -35 2500 77 0 3 chr2 114455285 114455597 -138800986 + AluY SINE Alu 1 311 0 2130 122 0 7 chr2 114455775 114456071 -138800512 + AluSc SINE Alu 1 294 -15 2296 78 7 3 chr2 114456082 114456377 -138800206 + AluSp SINE Alu 1 296 -17 189 0 0 0 chr2 114456543 114456564 -138800019 + (A)n Simple_repeat Simple_repeat 1 21 0 2507 68 0 13 chr2 114456564 114456875 -138799708 + AluY SINE Alu 1 307 -4 2282 107 0 3 chr2 114456884 114457193 -138799390 + AluSc SINE Alu 2 309 0 2159 113 7 13 chr2 114458395 114458695 -138797888 - AluSx SINE Alu -14 298 1 1227 201 34 46 chr2 114458842 114458976 -138797607 + Charlie1b DNA MER1_type 13 147 -2614 2215 110 0 7 chr2 114458976 114459277 -138797306 - AluSc SINE Alu -10 299 1 1227 201 34 46 chr2 114459277 114459470 -138797113 + Charlie1b DNA MER1_type 147 336 -187 1833 232 83 12 chr2 114459532 114459973 -138796610 - L1ME1 LINE L1 -5 6161 5680 496 157 0 29 chr2 114459973 114460075 -138796508 - L1MB8 LINE L1 -1 6177 6079 1833 232 83 12 chr2 114460075 114460124 -138796459 - L1ME1 LINE L1 -486 5680 5636 1228 213 141 32 chr2 114460283 114460773 -138795810 - MLT1E LTR MaLR -7 577 1 438 259 31 43 chr2 114461931 114461995 -138794588 + MER112 DNA MER1_type 95 158 -102 1384 185 12 66 chr2 114461995 114462314 -138794269 - AluJo SINE Alu -10 302 1 438 259 31 43 chr2 114462314 114462411 -138794172 + MER112 DNA MER1_type 158 254 -6 371 233 112 80 chr2 114462845 114463205 -138793378 - L1MEd LINE L1 -4860 1271 1010 2330 94 3 3 chr2 114463205 114463513 -138793070 - AluSq SINE Alu -5 308 1 371 233 112 80 chr2 114463513 114463591 -138792992 - L1MEd LINE L1 -5121 1010 936 332 154 77 0 chr2 114464321 114464386 -138792197 + L1MC5 LINE L1 7269 7338 -623 484 209 243 0 chr2 114464389 114464537 -138792046 + MER5A DNA MER1_type 5 188 -1 22 70 0 0 chr2 114464833 114464876 -138791707 + AT_rich Low_complexity Low_complexity 1 43 0 2117 110 30 3 chr2 114464885 114465186 -138791397 + AluSc SINE Alu 1 309 0 2156 105 14 3 chr2 114465632 114465926 -138790657 - AluSc SINE Alu -12 297 1 850 83 0 30 chr2 114466258 114466391 -138790192 + AluSc SINE Alu 181 309 0 266 186 143 0 chr2 114466397 114466467 -138790116 + Charlie1b DNA MER1_type 436 515 -8 734 253 79 0 chr2 114466688 114466890 -138789693 - MER58A DNA MER1_type -6 218 1 21 0 0 0 chr2 114467137 114467158 -138789425 + AT_rich Low_complexity Low_complexity 1 21 0 285 261 92 26 chr2 114468420 114468573 -138788010 + L2 LINE L2 87 249 -3065 601 197 0 26 chr2 114468740 114468857 -138787726 - AluJo SINE Alu -113 199 86 248 203 0 16 chr2 114468861 114468925 -138787658 + L2 LINE L2 727 789 -2525 291 275 104 28 chr2 114469271 114469482 -138787101 + L2 LINE L2 1196 1422 -1892 427 171 57 0 chr2 114470200 114470288 -138786295 + L1MD2 LINE L1 5678 5770 -589 996 171 0 12 chr2 114470289 114470459 -138786124 + AluSg/x SINE Alu 137 304 -8 1347 166 106 54 chr2 114470459 114470593 -138785990 + L1MD2 LINE L1 5759 5885 -474 1881 128 69 0 chr2 114470593 114470881 -138785702 + AluSx SINE Alu 1 308 -4 1347 166 106 54 chr2 114470881 114471114 -138785469 + L1MD2 LINE L1 5885 6145 -214 452 203 49 55 chr2 114471113 114471167 -138785416 + L1MD3 LINE L1 7832 7885 -110 * 1491 123 40 4 chr2 114471167 114471395 -138785188 - MER46A DNA MER2_type 0 236 1 452 203 49 55 chr2 114471395 114471503 -138785080 + L1MD3 LINE L1 7885 7993 -2 1387 191 7 30 chr2 114473680 114473983 -138782600 + AluJo SINE Alu 1 296 -16 1990 95 17 58 chr2 114474700 114474994 -138781589 + AluSx SINE Alu 1 282 -30 378 0 0 0 chr2 114474999 114475041 -138781542 + (CAT)n Simple_repeat Simple_repeat 1 42 0 1278 217 13 37 chr2 114475046 114475346 -138781237 + AluJo SINE Alu 1 293 -19 2115 126 10 0 chr2 114475749 114476042 -138780541 + AluSx SINE Alu 1 296 -16 4389 158 13 6 chr2 114476114 114476811 -138779772 - MER44D DNA MER2_type -31 574 1 626 185 7 0 chr2 114476811 114476946 -138779637 + L1M4 LINE L1 4338 4473 -1673 334 56 0 37 chr2 114476965 114477019 -138779564 + AluSc SINE Alu 242 293 -6 632 204 56 13 chr2 114477079 114477095 -138779488 + LTR49 LTR ERV1 422 436 -208 2266 101 7 0 chr2 114477095 114477393 -138779190 - AluSx SINE Alu -12 300 1 632 204 56 13 chr2 114477393 114477557 -138779026 + LTR49 LTR ERV1 436 632 -12 1697 104 115 0 chr2 114678042 114678302 -138578281 - AluSc SINE Alu -19 290 1 260 296 62 0 chr2 114678468 114678549 -138578034 - MIR SINE MIR -114 148 63 241 289 89 52 chr2 114678742 114678877 -138577706 + L2 LINE L2 2670 2809 -505 195 236 90 67 chr2 114678901 114678990 -138577593 + L3 LINE CR1 399 489 -1088 25 31 0 0 chr2 114679312 114679344 -138577239 + AT_rich Low_complexity Low_complexity 1 32 0 2143 71 0 18 chr2 114679983 114680263 -138576320 + AluY SINE Alu 1 275 -36 979 185 5 11 chr2 114680387 114680571 -138576012 + FRAM SINE Alu 1 175 -1 1913 148 3 33 chr2 114680583 114680886 -138575697 + AluSx SINE Alu 1 294 -18 1592 203 54 54 chr2 114680887 114681237 -138575346 + L1ME2 LINE L1 5667 6019 -145 2158 107 31 0 chr2 114681237 114681526 -138575057 + AluSg SINE Alu 1 298 -12 1592 203 54 54 chr2 114681526 114681673 -138574910 + L1ME2 LINE L1 6018 6164 0 2292 95 10 3 chr2 114681706 114682010 -138574573 + AluSq SINE Alu 1 306 -7 235 259 56 56 chr2 114682540 114682648 -138573935 + MIR SINE MIR 119 226 -36 7869 11 0 2 chr2 114683043 114684244 -138572339 - L1PA2 LINE L1 0 6155 4953 21 0 0 0 chr2 114684346 114684367 -138572216 + AT_rich Low_complexity Low_complexity 1 21 0 518 219 238 0 chr2 114684662 114684813 -138571770 - MER5A DNA MER1_type -1 188 2 303 154 77 0 chr2 114684813 114684878 -138571705 - L1MC5 LINE L1 -623 7338 7269 356 237 111 80 chr2 114685608 114685686 -138570897 + L1MEd LINE L1 936 1010 -5248 2355 94 3 3 chr2 114685686 114685993 -138570590 + AluSq SINE Alu 1 307 -6 356 237 111 80 chr2 114685993 114686353 -138570230 + L1MEd LINE L1 1010 1398 -4860 453 241 32 32 chr2 114686782 114686877 -138569706 - MER112 DNA MER1_type -6 254 157 1293 222 3 50 chr2 114686877 114687197 -138569386 + AluJo SINE Alu 1 305 -7 453 241 32 32 chr2 114687197 114687259 -138569324 - MER112 DNA MER1_type -102 158 97 1114 202 135 43 chr2 114687840 114688294 -138568289 + MLT1E LTR MaLR 35 549 -6 473 139 0 15 chr2 114688403 114688505 -138568078 + L1MB7 LINE L1 6079 6177 -1 * 1491 233 99 0 chr2 114688500 114688942 -138567641 + L1ME1 LINE L1 5676 6161 -5 575 186 21 0 chr2 114689450 114689547 -138567036 + AluJ/FLAM SINE Alu 1 99 -213 726 133 7 74 chr2 114689559 114689694 -138566889 - AluJb SINE Alu -165 147 22 423 143 0 0 chr2 114690478 114690541 -138566042 + AluS SINE Alu 1 63 -255 3695 153 13 5 chr2 114690643 114691263 -138565320 + MER44D DNA MER2_type 78 574 -31 2092 117 30 0 chr2 114691336 114691634 -138564949 - AluSx SINE Alu -5 307 1 1322 213 13 37 chr2 114692047 114692347 -138564236 - AluJo SINE Alu -19 293 1 1888 87 17 74 chr2 114692378 114692677 -138563906 - AluSx SINE Alu -30 282 1 1436 201 7 16 chr2 114693445 114693753 -138562830 - AluJo SINE Alu -7 305 1 201 244 0 0 chr2 114694985 114695030 -138561553 + (CATA)n Simple_repeat Simple_repeat 2 46 0 183 333 37 37 chr2 114695530 114695638 -138560945 + L3 LINE CR1 1327 1434 -143 22 56 0 0 chr2 114695811 114695847 -138560736 + AT_rich Low_complexity Low_complexity 1 36 0 402 191 74 49 chr2 114695945 114696048 -138560535 - L1MD2 LINE L1 -12 6347 6248 1444 127 40 4 chr2 114696048 114696276 -138560307 + MER46A DNA MER2_type 1 236 0 402 191 74 49 chr2 114696276 114696564 -138560019 - L1MD2 LINE L1 -111 6248 5888 2145 123 3 0 chr2 114696564 114696872 -138559711 - AluSx SINE Alu -3 309 1 402 191 74 49 chr2 114696872 114697006 -138559577 - L1MD2 LINE L1 -471 5888 5759 975 172 0 12 chr2 114697006 114697175 -138559408 - AluSg/x SINE Alu -9 301 135 348 204 57 0 chr2 114697176 114697264 -138559319 - L1MD2 LINE L1 -589 5770 5678 197 309 178 52 chr2 114697973 114698604 -138557979 - L2 LINE L2 -1878 1436 727 615 188 0 26 chr2 114698608 114698725 -138557858 + AluJo SINE Alu 86 199 -113 336 291 257 12 chr2 114698726 114699045 -138557538 - L2 LINE L2 -2831 483 87 660 246 84 10 chr2 114700578 114700781 -138555802 + MER58A DNA MER1_type 1 218 -6 242 186 143 0 chr2 114701002 114701072 -138555511 - Charlie1 DNA MER1_type -8 2753 2674 1153 168 23 14 chr2 114701076 114701094 -138555489 - AluSc SINE Alu 0 309 293 1728 80 58 0 chr2 114701094 114701318 -138555265 - AluSc SINE Alu -1 308 72 1153 168 23 14 chr2 114701318 114701519 -138555064 - AluSc SINE Alu -16 293 88 291 128 0 89 chr2 114701520 114701608 -138554975 - AluY SINE Alu -48 253 212 872 48 10 0 chr2 114701890 114701993 -138554590 - AluY SINE Alu -99 212 109 2385 76 3 3 chr2 114702256 114702557 -138554026 - AluY SINE Alu -10 301 1 585 130 137 41 chr2 114702600 114702746 -138553837 - MER3 DNA MER1_type -21 188 29 2104 134 0 31 chr2 114702882 114703203 -138553380 - AluSx SINE Alu -1 311 1 1971 117 48 14 chr2 114703368 114703658 -138552925 - AluSg SINE Alu -10 300 1 414 214 31 10 chr2 114704016 114704114 -138552469 - L1ME1 LINE L1 -50 6116 6017 * 1784 220 37 4 chr2 114704110 114704570 -138552013 - L1MD1 LINE L1 -371 5871 5397 1379 226 94 17 chr2 114704577 114705107 -138551476 - L1MD1 LINE L1 -880 5266 4696 2242 115 0 3 chr2 114705125 114705430 -138551153 - AluSx SINE Alu -8 304 1 28 0 0 0 chr2 114705506 114705534 -138551049 + AT_rich Low_complexity Low_complexity 1 28 0 3861 163 42 50 chr2 114705936 114705999 -138550584 - L1MB4 LINE L1 0 6180 6118 2206 91 11 0 chr2 114705999 114706284 -138550299 - AluSx SINE Alu -24 288 1 3861 163 42 50 chr2 114706284 114707211 -138549372 - L1MB4 LINE L1 -62 6118 5200 35 24 0 0 chr2 114707320 114707362 -138549221 + AT_rich Low_complexity Low_complexity 1 42 0 1733 136 0 4 chr2 114707429 114707679 -138548904 - AluJb SINE Alu -4 308 60 2713 200 35 12 chr2 114708065 114708286 -138548297 + L1ME1 LINE L1 5478 5692 -474 2273 87 27 0 chr2 114708286 114708584 -138547999 + AluSc SINE Alu 1 306 -3 2713 200 35 12 chr2 114708584 114709013 -138547570 + L1ME1 LINE L1 5692 6143 -23 1811 173 0 36 chr2 114709046 114709353 -138547230 + AluJo SINE Alu 1 296 -16 909 200 138 14 chr2 114709706 114709916 -138546667 - MER8 DNA MER2_type -3 236 1 670 255 84 47 chr2 114711561 114711928 -138544655 - L1ME1 LINE L1 -280 5884 5483 2442 70 0 22 chr2 114711928 114712243 -138544340 + AluY SINE Alu 1 308 -3 670 255 84 47 chr2 114712243 114712464 -138544119 - L1ME1 LINE L1 -681 5483 5272 21 36 0 0 chr2 114714120 114714148 -138542435 + AT_rich Low_complexity Low_complexity 1 28 0 586 214 8 30 chr2 114714500 114714517 -138542066 + AluJb SINE Alu 120 136 -176 1392 155 116 32 chr2 114714517 114714794 -138541789 + AluJo SINE Alu 1 300 -12 586 214 8 30 chr2 114714794 114714907 -138541676 + AluJb SINE Alu 136 247 -65 620 240 175 20 chr2 114715962 114716202 -138540381 + MIR SINE MIR 5 262 0 650 172 45 13 chr2 114716212 114716369 -138540214 + MER104 DNA Tc2 7 168 -12 22 80 0 0 chr2 114717862 114717912 -138538671 + AT_rich Low_complexity Low_complexity 1 50 0 35 71 0 0 chr2 114718063 114718133 -138538450 + AT_rich Low_complexity Low_complexity 1 70 0 310 233 182 5 chr2 114718221 114718428 -138538155 - L1MC/D LINE L1 -299 5822 5567 23 33 0 0 chr2 114719730 114719760 -138536823 + AT_rich Low_complexity Low_complexity 1 30 0 690 177 0 0 chr2 114720121 114720245 -138536338 - AluSg/x SINE Alu -1 311 188 267 268 0 56 chr2 114720263 114720334 -138536249 + L2 LINE L2 2692 2758 -556 189 0 0 0 chr2 114720337 114720358 -138536225 + (T)n Simple_repeat Simple_repeat 1 21 0 410 241 161 20 chr2 114720361 114720560 -138536023 - LTR27 LTR ERV1 -197 439 213 307 119 119 0 chr2 114720560 114720619 -138535964 - AluJb SINE Alu -115 187 122 233 240 50 66 chr2 114721016 114721137 -138535446 - L1ME1 LINE L1 -974 5172 5054 186 317 135 10 chr2 114721210 114721314 -138535269 + MIR3 SINE MIR 62 178 -30 285 29 0 0 chr2 114721809 114721843 -138534740 + (CA)n Simple_repeat Simple_repeat 2 35 0 779 186 81 51 chr2 114722277 114722352 -138534231 + MLT2D LTR ERVL 6 77 -337 2208 106 0 0 chr2 114722352 114722634 -138533949 + AluSg SINE Alu 1 282 -28 252 0 0 0 chr2 114722634 114722662 -138533921 + (TTAA)n Simple_repeat Simple_repeat 4 31 0 779 186 81 51 chr2 114722662 114722821 -138533762 + MLT2D LTR ERVL 76 248 -166 4035 154 18 18 chr2 114724544 114725316 -138531267 + L1MB4 LINE L1 5358 6129 -51 1586 149 36 26 chr2 114725865 114725989 -138530594 + AluJo SINE Alu 1 122 -190 207 0 0 0 chr2 114725989 114726012 -138530571 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1586 149 36 26 chr2 114726012 114726196 -138530387 + AluJo SINE Alu 122 312 0 315 318 23 11 chr2 114726922 114727098 -138529485 + (CA)n Simple_repeat Simple_repeat 1 178 0 240 35 0 0 chr2 114728048 114728077 -138528506 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 2235 94 3 3 chr2 114728079 114728366 -138528217 - AluSg SINE Alu -23 287 1 221 350 75 30 chr2 114728679 114728879 -138527704 + MIR SINE MIR 8 216 -46 837 379 61 13 chr2 114729713 114730185 -138526398 + L3 LINE CR1 60 554 -1023 228 245 19 0 chr2 114730435 114730488 -138526095 + L3 LINE CR1 595 648 -929 859 83 0 0 chr2 114730503 114730611 -138525972 + AluSc SINE Alu 1 108 -201 275 176 0 88 chr2 114730613 114730681 -138525902 + L3 LINE CR1 659 720 -857 1714 143 13 127 chr2 114731365 114731758 -138524825 - MER7A DNA MER2_type 0 346 1 468 242 10 0 chr2 114731976 114732020 -138524563 + MER3 DNA MER1_type 4 48 -161 608 211 62 0 chr2 114732020 114732148 -138524435 - MER3 DNA MER1_type 0 209 74 604 256 34 23 chr2 114732276 114732452 -138524131 - MER5B DNA MER1_type 0 178 1 209 376 0 11 chr2 114732907 114733000 -138523583 - MIR3 SINE MIR -6 202 111 408 283 84 40 chr2 114733335 114733586 -138522997 - L2 LINE L2 -44 3269 3008 225 364 131 0 chr2 114734030 114734129 -138522454 + L2 LINE L2 3161 3272 0 249 236 130 41 chr2 114735984 114736107 -138520476 - MER103 DNA DNA -18 148 15 425 259 54 48 chr2 114736868 114737034 -138519549 - MIR3 SINE MIR -7 201 35 3832 141 45 73 chr2 114738733 114739472 -138517111 - LTR62 LTR ERVK -1 718 1 637 236 43 0 chr2 114739874 114740035 -138516548 + MER5A DNA MER1_type 3 170 -19 486 228 89 15 chr2 114740623 114740777 -138515806 + MLT2B3 LTR ERVL 220 554 0 2453 179 69 27 chr2 114741575 114742124 -138514459 - L1MB1 LINE L1 -1 6167 5596 1260 237 44 48 chr2 114742384 114742516 -138514067 + MLT1C LTR MaLR 54 185 -282 1267 189 36 29 chr2 114742516 114742819 -138513764 + AluJo SINE Alu 1 305 0 1260 237 44 48 chr2 114742819 114742840 -138513743 + MLT1C LTR MaLR 185 205 -262 275 0 29 0 chr2 114742840 114742875 -138513708 + (TC)n Simple_repeat Simple_repeat 1 36 0 * 387 0 0 0 chr2 114742874 114742917 -138513666 + (CA)n Simple_repeat Simple_repeat 1 43 0 1260 237 44 48 chr2 114742875 114743173 -138513410 + MLT1C LTR MaLR 205 464 -3 323 317 67 36 chr2 114743496 114743720 -138512863 + MIR SINE MIR 20 250 -12 247 133 0 5 chr2 114744107 114744159 -138512424 + Alu SINE Alu 33 77 -89 1886 175 33 41 chr2 114746547 114746851 -138509732 - MER89 LTR ERV1 0 559 160 1972 121 0 3 chr2 114746851 114747159 -138509424 + AluSx SINE Alu 1 307 0 1886 175 33 41 chr2 114747159 114747318 -138509265 - MER89 LTR ERV1 -399 160 1 648 237 45 96 chr2 114747999 114748299 -138508284 + MER102a DNA MER1_type 1 284 -1133 1632 211 37 8 chr2 114748299 114748650 -138507933 + MLT1A1 LTR MaLR 2 362 -3 648 237 45 96 chr2 114748650 114748682 -138507901 + MER102a DNA MER1_type 284 316 -14 266 254 28 51 chr2 114749065 114749145 -138507438 + MIR3 SINE MIR 95 175 -33 891 314 41 9 chr2 114749195 114749514 -138507069 - MLT1I LTR MaLR 0 409 81 2261 172 8 0 chr2 114749547 114749908 -138506675 - MLT1A1 LTR MaLR -1 364 1 184 213 106 21 chr2 114750776 114750823 -138505760 + L2 LINE L2 3246 3296 -17 430 322 8 0 chr2 114751074 114751195 -138505388 - MIR SINE MIR -15 247 126 279 138 17 0 chr2 114752763 114752821 -138503762 + L1ME4a LINE L1 6060 6118 -3 2514 39 3 3 chr2 114752832 114753138 -138503445 + AluY SINE Alu 1 306 -5 841 76 35 48 chr2 114754091 114754236 -138502347 + FLAM_C SINE Alu 1 143 0 2798 79 0 3 chr2 114754314 114754670 -138501913 - THE1A LTR MaLR 0 355 1 490 289 72 53 chr2 114754920 114755297 -138501286 - L2 LINE L2 -94 3219 2836 575 202 98 20 chr2 114755789 114755965 -138500618 - MIR SINE MIR -60 202 3 346 148 49 0 chr2 114756311 114756392 -138500191 + L1MB4 LINE L1 6096 6180 0 751 242 28 19 chr2 114756396 114756631 -138499952 - L1M2 LINE L1 -4264 2163 1734 1556 175 0 32 chr2 114756655 114756969 -138499614 - AluJo SINE Alu -8 304 1 1726 215 168 17 chr2 114756970 114757487 -138499096 - L1MD2 LINE L1 -7 6352 5758 210 118 0 0 chr2 114757736 114757770 -138498813 + (CA)n Simple_repeat Simple_repeat 1 34 0 267 253 13 0 chr2 114758832 114758911 -138497672 + L1ME2 LINE L1 49 128 -6268 * 1867 220 40 17 chr2 114758902 114759544 -138497039 + L1ME2 LINE L1 4315 5898 -337 2010 108 13 16 chr2 114759545 114759850 -138496733 + AluSx SINE Alu 9 312 0 216 0 0 0 chr2 114759856 114759880 -138496703 + (GAAAA)n Simple_repeat Simple_repeat 3 26 0 944 199 0 0 chr2 114759880 114760051 -138496532 + AluJb SINE Alu 130 300 -12 575 255 7 0 chr2 114760052 114760205 -138496378 + L1ME2 LINE L1 5895 6048 -185 * 6664 231 50 44 chr2 114760190 114760829 -138495754 + L1MC3 LINE L1 2983 3617 -2529 1904 187 3 55 chr2 114760829 114761214 -138495369 - MLT1A1 LTR MaLR 0 365 1 6664 231 50 44 chr2 114761214 114764305 -138492278 + L1MC3 LINE L1 3617 5363 -783 3262 153 138 102 chr2 114766014 114766390 -138490193 + L1MC3 LINE L1 6726 7087 -698 325 286 11 0 chr2 114766390 114766481 -138490102 + MLT1F1 LTR MaLR 34 125 -442 3262 153 138 102 chr2 114766481 114767037 -138489546 + L1MC3 LINE L1 7087 7785 0 317 237 21 32 chr2 114767046 114767139 -138489444 + CT-rich Low_complexity Low_complexity 5 96 0 1556 196 163 5 chr2 114767154 114767522 -138489061 - MSTB LTR MaLR 0 426 1 184 342 54 18 chr2 114767639 114767750 -138488833 - MIR3 SINE MIR -88 120 6 263 280 42 42 chr2 114767958 114768076 -138488507 - MIR SINE MIR -40 222 105 220 300 215 8 chr2 114769005 114769135 -138487448 + MIR3 SINE MIR 41 197 -11 186 244 0 0 chr2 114769300 114769341 -138487242 - L2 LINE L2 -9 3304 3264 2207 197 45 7 chr2 114770508 114770949 -138485634 - MLT1C LTR MaLR -8 459 2 192 300 11 56 chr2 114771365 114771455 -138485128 + MIR SINE MIR 113 198 -64 357 265 8 30 chr2 114772449 114772581 -138484002 + CT-rich Low_complexity Low_complexity 2 130 0 2179 104 0 0 chr2 114774204 114774502 -138482081 + AluSx SINE Alu 1 298 -14 464 250 58 0 chr2 114775909 114776029 -138480554 + L2 LINE L2 3145 3271 -1 2653 131 36 0 chr2 114776045 114776458 -138480125 + MSTA LTR MaLR 1 428 0 1026 164 29 0 chr2 114777467 114777638 -138478945 - MER5A DNA MER1_type 0 189 14 240 216 20 0 chr2 114778546 114778597 -138477986 - MER5B DNA MER1_type -61 117 66 393 283 10 0 chr2 114778683 114778782 -138477801 - MIR SINE MIR -70 138 39 183 240 307 0 chr2 114779686 114779761 -138476822 + MIR SINE MIR 117 214 -48 192 179 0 0 chr2 114780204 114780243 -138476340 + (TTCA)n Simple_repeat Simple_repeat 4 42 0 213 250 88 0 chr2 114780786 114780854 -138475729 + MIR SINE MIR 119 192 -70 1061 158 40 0 chr2 114781096 114781298 -138475285 - L1MA5 LINE L1 0 6300 6091 1196 146 25 0 chr2 114781298 114781497 -138475086 - Tigger1 DNA MER2_type -6 2412 2209 3504 185 20 29 chr2 114781510 114782721 -138473862 - L1MDb LINE L1 -3178 3670 2473 294 288 118 29 chr2 114783272 114783386 -138473197 - MIR SINE MIR -73 189 54 2310 93 17 3 chr2 114783386 114783686 -138472897 + AluY SINE Alu 1 304 -7 294 288 118 29 chr2 114783686 114783741 -138472842 - MIR SINE MIR -208 54 5 180 0 0 0 chr2 114784462 114784482 -138472101 + (A)n Simple_repeat Simple_repeat 1 20 0 2199 243 167 13 chr2 114784922 114785836 -138470747 - L1ME3A LINE L1 -5 6867 5816 826 200 260 5 chr2 114785837 114786037 -138470546 - AluJo SINE Alu -59 253 3 1248 260 75 35 chr2 114786037 114786786 -138469797 - L1ME3A LINE L1 -977 5871 5048 3152 216 80 26 chr2 114786889 114787940 -138468643 - L1MDb LINE L1 -5074 1777 443 236 213 213 11 chr2 114788938 114789032 -138467551 + MIR SINE MIR 33 145 -63 256 318 32 3 chr2 114789191 114789348 -138467235 - MIR SINE MIR -50 212 11 296 321 30 15 chr2 114789610 114789741 -138466842 - MIR SINE MIR -70 192 60 5749 249 23 23 chr2 114789877 114791685 -138464898 - L1MDa LINE L1 -1887 4653 2846 341 159 95 0 chr2 114791693 114791756 -138464827 - MER21A LTR ERV1 -6 925 857 409 147 59 0 chr2 114792096 114792164 -138464419 + MER21A LTR ERV1 854 925 -6 275 250 69 76 chr2 114792172 114792316 -138464267 + L1M4 LINE L1 2452 2594 -3552 2723 137 72 32 chr2 114792325 114792999 -138463584 - MER21A LTR ERV1 -116 815 1 1186 208 19 30 chr2 114793009 114793501 -138463082 - L1MDa LINE L1 -3710 2830 2347 218 171 0 0 chr2 114793687 114793722 -138462861 + (CTG)n Simple_repeat Simple_repeat 1 35 0 838 268 35 31 chr2 114793796 114794113 -138462470 - L1MDa LINE L1 -6205 335 18 225 292 0 15 chr2 114795987 114796052 -138460531 + G-rich Low_complexity Low_complexity 2 65 0 243 88 0 0 chr2 114796152 114796186 -138460397 + (GAAA)n Simple_repeat Simple_repeat 3 36 0 295 252 48 19 chr2 114797223 114797326 -138459257 + MIR SINE MIR 36 141 -67 321 239 192 0 chr2 114797350 114797480 -138459103 - MER117 DNA MER1_type -7 190 36 194 256 0 0 chr2 114797504 114797547 -138459036 + MIR3 SINE MIR 158 200 -8 180 0 0 0 chr2 114798156 114798176 -138458407 + (CAGCT)n Simple_repeat Simple_repeat 4 23 0 348 162 0 29 chr2 114799123 114799191 -138457392 + MLT1K LTR MaLR 510 575 -13 281 233 0 35 chr2 114799235 114799321 -138457262 - MIR SINE MIR -63 199 117 181 336 77 7 chr2 114800354 114800497 -138456086 + MIR SINE MIR 109 261 -1 195 26 103 0 chr2 114800677 114800716 -138455867 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 281 323 23 8 chr2 114803593 114803723 -138452860 - MIR SINE MIR -78 184 53 342 0 0 0 chr2 114805603 114805641 -138450942 + (CA)n Simple_repeat Simple_repeat 2 39 0 1156 191 14 5 chr2 114805805 114806025 -138450558 - MER58A DNA MER1_type 0 224 3 250 265 26 60 chr2 114806266 114806383 -138450200 + MER103 DNA DNA 1 113 -53 297 51 0 0 chr2 114807661 114807700 -138448883 + (TG)n Simple_repeat Simple_repeat 2 40 0 494 256 61 15 chr2 114808411 114808585 -138447998 + MIR SINE MIR 3 183 -65 194 240 0 0 chr2 114808984 114809034 -138447549 + MIR SINE MIR 89 138 -124 297 294 86 12 chr2 114809084 114809247 -138447336 - MIR SINE MIR -71 191 17 2023 177 110 11 chr2 114811151 114811598 -138444985 - MLT1D LTR MaLR -8 497 7 285 29 0 0 chr2 114812516 114812550 -138444033 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 439 219 9 38 chr2 114813191 114813296 -138443287 + MER81 DNA DNA 11 112 -2 310 42 21 21 chr2 114813759 114813807 -138442776 + L1PA3 LINE L1 6103 6150 -5 2574 106 19 6 chr2 114814022 114814381 -138442202 - THE1B LTR MaLR 0 364 1 507 153 0 0 chr2 114814740 114814825 -138441758 - L1ME LINE L1 -354 5879 5795 506 135 22 22 chr2 114814831 114814920 -138441663 - Tigger7 DNA MER2_type 0 2491 2403 1446 209 4 4 chr2 114814946 114815214 -138441369 - Tigger7 DNA MER2_type -2219 268 1 1347 218 71 66 chr2 114815214 114815913 -138440670 - L1ME LINE L1 -443 5790 5070 227 286 92 0 chr2 114815923 114816021 -138440562 - L1ME LINE L1 -3266 2949 2843 1349 289 85 59 chr2 114816046 114817137 -138439446 - L1ME LINE L1 -4529 1867 748 714 253 182 24 chr2 114817436 114817732 -138438851 - L1ME LINE L1 -5722 483 141 198 128 0 0 chr2 114819080 114819119 -138437464 + (TG)n Simple_repeat Simple_repeat 2 40 0 1760 178 158 22 chr2 114819451 114819817 -138436766 + MSTC LTR MaLR 1 416 -12 1851 193 35 3 chr2 114820381 114820729 -138435854 - MLT1A1 LTR MaLR 0 365 7 453 260 66 84 chr2 114821038 114821155 -138435428 + MIR SINE MIR 28 146 -116 2167 82 65 3 chr2 114821155 114821446 -138435137 + AluSx SINE Alu 1 309 -3 3251 88 5 2 chr2 114821455 114821899 -138434684 + L1PA13 LINE L1 5716 6160 -3 453 260 66 84 chr2 114821899 114821998 -138434585 + MIR SINE MIR 154 250 -12 190 402 43 4 chr2 114822596 114822830 -138433753 - MIR SINE MIR 0 262 20 375 301 18 72 chr2 114824193 114824359 -138432224 + L2 LINE L2 2602 2758 -556 1370 225 114 12 chr2 114824384 114824776 -138431807 - LTR28 LTR ERV1 -197 439 1 1934 103 30 36 chr2 114824776 114825077 -138431506 - LTR28-int LTR ERV1 0 7091 6793 11584 238 25 33 chr2 114825234 114827998 -138428585 - MER52-int LTR ERV1 -2858 4233 1492 283 330 28 18 chr2 114828012 114828121 -138428462 - MER52-int LTR ERV1 -5928 1163 1054 1206 191 55 5 chr2 114828316 114828536 -138428047 - MER52-int LTR ERV1 -6663 428 198 2200 138 0 0 chr2 114828615 114828920 -138427663 - AluSx SINE Alu -7 305 1 3429 166 39 50 chr2 114829042 114829912 -138426671 - L1MB7 LINE L1 -25 6159 4784 23 54 0 0 chr2 114830129 114830166 -138426417 + AT_rich Low_complexity Low_complexity 1 37 0 354 346 0 10 chr2 114830168 114830272 -138426311 + L2 LINE L2 3138 3240 -32 212 128 64 0 chr2 114834940 114834987 -138421596 + (TTTG)n Simple_repeat Simple_repeat 3 52 0 224 0 65 0 chr2 114836903 114836934 -138419649 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 449 331 24 0 chr2 114838191 114838357 -138418226 + MIR SINE MIR 81 250 -12 362 235 12 12 chr2 114839463 114839548 -138417035 - L2 LINE L2 -3 3310 3226 306 336 24 16 chr2 114839848 114839973 -138416610 + L3 LINE CR1 439 564 -1013 375 282 39 0 chr2 114840213 114840316 -138416267 + MIR SINE MIR 34 140 -68 360 352 5 51 chr2 114840295 114840491 -138416092 + L3 LINE CR1 639 825 -752 * 1839 108 3 69 chr2 114840513 114840850 -138415733 + AluSq SINE Alu 1 317 0 250 346 77 0 chr2 114841213 114841317 -138415266 + L3 LINE CR1 901 1012 -565 1629 163 60 3 chr2 114841475 114841757 -138414826 - AluJb SINE Alu -14 298 1 362 242 35 13 chr2 114842073 114842231 -138414352 + L1ME4a LINE L1 5310 5480 -879 308 350 12 43 chr2 114842273 114842436 -138414147 + MIR SINE MIR 35 192 -70 366 218 129 75 chr2 114842599 114842746 -138413837 + L1ME4a LINE L1 5894 6048 -73 304 328 9 9 chr2 114842869 114842985 -138413598 + L3 LINE CR1 1161 1276 -301 731 125 0 16 chr2 114843224 114843352 -138413231 + (TTCC)n Simple_repeat Simple_repeat 4 129 0 315 298 145 0 chr2 114843836 114843967 -138412616 - MIR SINE MIR -62 200 51 245 226 83 48 chr2 114844316 114844400 -138412183 + MLT1K LTR MaLR 467 553 -35 285 109 0 0 chr2 114845825 114845871 -138410712 + (GA)n Simple_repeat Simple_repeat 1 46 0 781 299 23 30 chr2 114846552 114846816 -138409767 - MIR SINE MIR 0 262 1 492 277 53 48 chr2 114846993 114847199 -138409384 + MIR SINE MIR 5 211 -51 204 279 38 51 chr2 114847571 114847650 -138408933 + MIR SINE MIR 55 132 -76 2537 108 88 10 chr2 114847802 114848199 -138408384 - MSTA LTR MaLR 0 428 1 10077 154 18 4 chr2 114848199 114849827 -138406756 - MSTA-int LTR MaLR 0 1651 1 2330 134 86 10 chr2 114849827 114850223 -138406360 - MSTA LTR MaLR 0 428 3 300 271 159 54 chr2 114850239 114850497 -138406086 + L2 LINE L2 3029 3313 0 1392 202 87 48 chr2 114850663 114851098 -138405485 + L1ME2 LINE L1 5707 6158 -6 3034 99 7 7 chr2 114851109 114851555 -138405028 - L1PA10 LINE L1 0 6168 5723 1926 204 35 0 chr2 114851878 114852274 -138404309 + L1ME LINE L1 3 412 -6128 1823 176 29 41 chr2 114852283 114852697 -138403886 + L1ME LINE L1 1905 2313 -4227 2912 206 69 55 chr2 114852701 114853561 -138403022 + L1ME LINE L1 4293 5164 -1376 773 256 53 108 chr2 114853635 114854124 -138402459 + MLT1H1 LTR MaLR 45 506 -49 1749 222 84 24 chr2 114854148 114854321 -138402262 + L1ME LINE L1 5193 5354 -1210 2004 112 3 3 chr2 114854321 114854631 -138401952 + AluSx SINE Alu 1 310 0 1749 222 84 24 chr2 114854631 114855159 -138401424 + L1ME LINE L1 5354 5939 -625 211 250 0 69 chr2 114856977 114857049 -138399534 + MIR SINE MIR 118 184 -78 21 0 0 0 chr2 114857161 114857182 -138399401 + AT_rich Low_complexity Low_complexity 1 21 0 234 269 0 45 chr2 114859485 114859552 -138397031 - MIR SINE MIR -91 117 54 4419 174 26 14 chr2 114860096 114860245 -138396338 - L1MB2 LINE L1 -39 6132 5986 2001 116 18 0 chr2 114860245 114860530 -138396053 - AluSx SINE Alu -21 291 2 4419 174 26 14 chr2 114860530 114861233 -138395350 - L1MB2 LINE L1 -185 5986 5270 343 274 44 9 chr2 114862227 114862340 -138394243 - MIR SINE MIR -73 189 73 717 89 0 0 chr2 114862388 114862478 -138394105 + FRAM SINE Alu 52 141 -35 241 226 108 39 chr2 114862617 114862719 -138393864 - Charlie8 DNA MER1_type -2236 181 73 1815 108 4 0 chr2 114868029 114868278 -138388305 + AluSp SINE Alu 44 293 -20 2328 82 0 3 chr2 114868406 114868712 -138387871 + AluY SINE Alu 1 305 -6 610 259 111 37 chr2 114868771 114869014 -138387569 + MIR SINE MIR 1 261 -1 307 297 68 62 chr2 114870406 114870598 -138385985 - L2 LINE L2 -12 3301 3109 562 257 113 4 chr2 114870677 114870946 -138385637 + MLT1G3 LTR MaLR 197 589 -6 1273 242 141 6 chr2 114870950 114871305 -138385278 + MER69 DNA AcHobo 59 461 -2065 2495 81 3 3 chr2 114871317 114871652 -138384931 + L1PA13 LINE L1 5829 6163 0 1031 211 110 13 chr2 114871708 114872026 -138384557 + MER69 DNA AcHobo 2010 2358 -168 821 309 146 31 chr2 114872060 114872429 -138384154 + L2 LINE L2 1870 2195 -1119 916 206 70 23 chr2 114872429 114872643 -138383940 - MER58A DNA MER1_type 0 224 1 821 309 146 31 chr2 114872643 114872959 -138383624 + L2 LINE L2 2195 2634 -680 439 334 80 60 chr2 114873120 114873172 -138383411 + L2 LINE L2 2914 2964 -308 2949 122 20 7 chr2 114873172 114873614 -138382969 - MER83 LTR ERV1 0 448 1 439 334 80 60 chr2 114873614 114873875 -138382708 + L2 LINE L2 2964 3233 -39 634 263 32 18 chr2 114874449 114874666 -138381917 - L1MD3 LINE L1 -4 7991 7772 1414 214 0 37 chr2 114875103 114875426 -138381157 + AluJb SINE Alu 2 312 0 2281 88 0 3 chr2 114876220 114876527 -138380056 - AluSg SINE Alu -4 306 1 4368 146 27 12 chr2 114876664 114877409 -138379174 + Tigger2 DNA MER2_type 2 757 -1961 1137 141 168 0 chr2 114877464 114877684 -138378899 + Tigger2 DNA MER2_type 2452 2708 -10 28 0 0 0 chr2 114879862 114879890 -138376693 + AT_rich Low_complexity Low_complexity 1 28 0 247 319 76 51 chr2 114880517 114880674 -138375909 - MIR SINE MIR -55 207 47 907 214 76 0 chr2 114880774 114881036 -138375547 - L1MB7 LINE L1 0 6184 5903 1160 119 37 41 chr2 114883507 114883725 -138372858 - L1PA16 LINE L1 -9 6157 5941 245 192 19 0 chr2 114885294 114885346 -138371237 + CT-rich Low_complexity Low_complexity 2 54 0 251 295 114 38 chr2 114885431 114885536 -138371047 + MIR3 SINE MIR 73 185 -23 28 29 0 0 chr2 114885545 114885580 -138371003 + AT_rich Low_complexity Low_complexity 1 35 0 270 267 92 33 chr2 114886948 114887068 -138369515 + L2 LINE L2 2938 3064 -208 410 279 76 62 chr2 114888013 114888289 -138368294 + L2 LINE L2 3034 3313 0 996 178 191 31 chr2 114888625 114888918 -138367665 + MER2 DNA MER2_type 6 345 0 191 340 150 0 chr2 114889571 114889671 -138366912 - MIR SINE MIR -63 145 31 549 279 83 29 chr2 114889779 114889857 -138366726 + MIR SINE MIR 20 92 -170 180 0 0 0 chr2 114889857 114889877 -138366706 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 549 279 83 29 chr2 114889877 114890002 -138366581 + MIR SINE MIR 92 234 -28 2297 104 7 0 chr2 114890664 114890961 -138365622 - AluSp SINE Alu -13 300 2 2682 167 17 31 chr2 114891806 114891848 -138364735 - L1MCb LINE L1 -4851 1194 1153 1767 193 40 3 chr2 114891848 114892196 -138364387 - MLT1A1 LTR MaLR -3 362 2 2682 167 17 31 chr2 114892196 114892255 -138364328 - L1MCb LINE L1 -4892 1153 1095 2478 81 0 0 chr2 114892255 114892564 -138364019 - AluY SINE Alu -2 309 1 2682 167 17 31 chr2 114892564 114893271 -138363312 - L1MCb LINE L1 -4950 1095 721 262 179 0 0 chr2 114893279 114893335 -138363248 + L1MD3 LINE L1 7581 7636 -359 580 242 65 5 chr2 114893346 114893532 -138363051 + L1MD3 LINE L1 7746 7942 -53 348 231 26 0 chr2 114893602 114893680 -138362903 - L1MD3 LINE L1 -1433 6562 6483 1973 133 23 10 chr2 114893908 114894216 -138362367 + AluSx SINE Alu 1 312 0 1012 143 0 25 chr2 114894216 114894408 -138362175 + AluSg/x SINE Alu 134 312 0 2405 65 0 0 chr2 114894812 114895104 -138361479 - AluY SINE Alu -19 292 1 1246 180 13 0 chr2 114895104 114895379 -138361204 - MER33 DNA MER1_type -52 272 1 1884 172 10 7 chr2 114896253 114896561 -138360022 - AluSc SINE Alu 0 309 1 2180 110 7 3 chr2 114898283 114898582 -138358001 + AluSc SINE Alu 1 300 -9 2426 72 10 3 chr2 114899341 114899646 -138356937 + AluY SINE Alu 1 307 -4 263 270 35 43 chr2 114900324 114900439 -138356144 - MIR SINE MIR -80 182 69 21 57 0 0 chr2 114900821 114900856 -138355727 + AT_rich Low_complexity Low_complexity 1 35 0 2687 73 123 8 chr2 114900868 114901232 -138355351 + MLT2A1 LTR ERVL 1 416 -28 269 26 0 26 chr2 114901232 114901271 -138355312 + (TCCA)n Simple_repeat Simple_repeat 1 38 0 2687 73 123 8 chr2 114901271 114901304 -138355279 + MLT2A1 LTR ERVL 416 444 0 1982 109 4 4 chr2 114901805 114902079 -138354504 + AluSg1 SINE Alu 1 274 -35 186 71 0 0 chr2 114902083 114902111 -138354472 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 1870 161 0 3 chr2 114902529 114902820 -138353763 - AluSx SINE Alu -22 290 1 256 348 54 22 chr2 114902872 114902964 -138353619 - MIR SINE MIR -78 130 36 686 69 0 0 chr2 114903523 114903610 -138352973 + AluY SINE Alu 1 87 -223 997 152 54 75 chr2 114904424 114904721 -138351862 + MER33 DNA MER1_type 1 274 -50 183 42 0 0 chr2 114904721 114904745 -138351838 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 875 189 0 7 chr2 114904745 114904888 -138351695 - FRAM SINE Alu -30 146 5 354 277 121 14 chr2 114905057 114905198 -138351385 + MIR3 SINE MIR 45 200 -8 2032 142 13 3 chr2 114906318 114906627 -138349956 - AluSx SINE Alu 0 312 1 198 143 0 0 chr2 114909304 114909339 -138347244 + (ATG)n Simple_repeat Simple_repeat 2 36 0 941 215 31 51 chr2 114909339 114909595 -138346988 - MIR SINE MIR -10 252 2 30 0 0 0 chr2 114910497 114910527 -138346056 + AT_rich Low_complexity Low_complexity 1 30 0 343 263 121 60 chr2 114911197 114911429 -138345154 + L1ME4a LINE L1 5773 6018 -103 290 315 30 25 chr2 114911560 114911733 -138344850 + MIR SINE MIR 24 197 -65 617 285 42 23 chr2 114911936 114912150 -138344433 + MIR SINE MIR 24 241 -21 23 54 0 0 chr2 114912916 114912953 -138343630 + AT_rich Low_complexity Low_complexity 1 37 0 2053 130 7 3 chr2 114913005 114913305 -138343278 - AluSx SINE Alu -9 303 3 363 296 98 15 chr2 114914535 114914667 -138341916 - MIR3 SINE MIR -57 151 9 2171 110 0 0 chr2 114915295 114915596 -138340987 + AluSx SINE Alu 1 301 0 1628 177 34 14 chr2 114915626 114915920 -138340663 + AluJb SINE Alu 1 300 -12 21 0 0 0 chr2 114916139 114916160 -138340423 + AT_rich Low_complexity Low_complexity 1 21 0 285 253 0 0 chr2 114916551 114916634 -138339949 + T-rich Low_complexity Low_complexity 1 83 0 1002 159 17 11 chr2 114917490 114917666 -138338917 + AluSg/x SINE Alu 132 308 -2 1542 100 0 92 chr2 114918434 114918685 -138337898 - AluY SINE Alu -83 228 1 202 164 73 73 chr2 114918982 114919037 -138337546 - MIR SINE MIR -21 241 187 1619 108 0 5 chr2 114920356 114920599 -138335984 + AluSg/x SINE Alu 70 311 0 1243 156 5 9 chr2 114920707 114920918 -138335665 + AluJo SINE Alu 77 286 -26 2286 96 3 3 chr2 114920926 114921227 -138335356 + AluSq SINE Alu 1 301 -12 237 220 34 0 chr2 114921283 114921342 -138335241 + L1ME4a LINE L1 5978 6038 -83 190 313 20 144 chr2 114921942 114921997 -138334586 - MER5B DNA MER1_type -6 172 112 1409 243 6 118 chr2 114921997 114922335 -138334248 + AluY SINE Alu 1 300 -1 190 313 20 144 chr2 114922335 114922409 -138334174 - MER5B DNA MER1_type -66 112 72 1633 179 14 23 chr2 114922409 114922537 -138334046 + L1MB8 LINE L1 5820 5948 -230 2739 13 0 0 chr2 114922537 114922836 -138333747 + AluYa5 SINE Alu 1 299 -12 1633 179 14 23 chr2 114922836 114923054 -138333529 + L1MB8 LINE L1 5948 6163 -15 190 313 20 144 chr2 114923054 114923118 -138333465 - MER5B DNA MER1_type -106 72 2 187 339 136 0 chr2 114923642 114923760 -138332823 + L2 LINE L2 3137 3270 -2 1897 125 0 36 chr2 114924334 114924639 -138331944 + AluSx SINE Alu 4 297 -15 1980 137 23 23 chr2 114924643 114924949 -138331634 + AluJb SINE Alu 1 306 -6 404 350 144 12 chr2 114925253 114925510 -138331073 + L3 LINE CR1 1209 1499 -78 566 234 134 69 chr2 114925553 114925903 -138330680 + L1MC4a LINE L1 5520 5892 -1916 385 298 42 48 chr2 114926376 114926421 -138330162 - L3 LINE CR1 -1037 540 496 2152 116 3 10 chr2 114926421 114926722 -138329861 - AluSx SINE Alu -13 299 1 385 298 42 48 chr2 114926722 114926844 -138329739 - L3 LINE CR1 -1081 496 374 1757 142 7 31 chr2 114927265 114927554 -138329029 + AluJo SINE Alu 1 282 -30 257 182 0 0 chr2 114927580 114927624 -138328959 + Alu SINE Alu 1 44 -258 435 182 39 0 chr2 114927625 114927702 -138328881 + AluJo/FRAM SINE Alu 198 277 -35 2434 73 0 10 chr2 114927756 114928070 -138328513 + AluY SINE Alu 1 311 0 2146 118 0 7 chr2 114928248 114928544 -138328039 + AluSc SINE Alu 1 294 -15 2190 95 7 3 chr2 114928555 114928850 -138327733 + AluSp SINE Alu 1 296 -17 2396 68 0 7 chr2 114929029 114929323 -138327260 + AluY SINE Alu 3 294 -17 2226 113 0 3 chr2 114929333 114929642 -138326941 + AluSc SINE Alu 2 309 0 2103 119 0 13 chr2 114930828 114931139 -138325444 - AluSg SINE Alu -3 307 1 1010 246 7 40 chr2 114931286 114931421 -138325162 + Charlie1b DNA MER1_type 13 136 -2625 2035 116 0 7 chr2 114931421 114931722 -138324861 - AluSc SINE Alu -10 299 1 1010 246 7 40 chr2 114931722 114931863 -138324720 + Charlie1b DNA MER1_type 136 280 -243 1103 120 0 0 chr2 114933234 114933392 -138323191 + AluJo SINE Alu 1 158 -154 234 200 22 0 chr2 114933392 114933437 -138323146 + Alu SINE Alu 107 152 -14 226 333 56 19 chr2 114933981 114934089 -138322494 - MIR SINE MIR -59 149 38 267 267 31 47 chr2 114935262 114935453 -138321130 + L1M4 LINE L1 5042 5229 -917 225 314 0 58 chr2 114935547 114935668 -138320915 + L1P LINE L1 5258 5371 -785 210 294 15 15 chr2 114936723 114936791 -138319792 - MIR SINE MIR -10 252 185 1378 140 36 0 chr2 114938179 114938401 -138318182 + MER30 DNA MER1_type 1 230 0 533 234 32 110 chr2 114940196 114940364 -138316219 - Charlie8 DNA MER1_type -2008 409 270 581 248 87 0 chr2 114940364 114940525 -138316058 + MER96 DNA MER1_type 1 175 0 533 234 32 110 chr2 114940525 114940638 -138315945 - Charlie8 DNA MER1_type -2147 270 150 198 0 0 0 chr2 114940807 114940829 -138315754 + (A)n Simple_repeat Simple_repeat 1 22 0 2031 125 0 0 chr2 114941100 114941387 -138315196 + AluSx SINE Alu 3 289 -23 240 236 89 41 chr2 114941487 114941610 -138314973 + L1ME3A LINE L1 2178 2306 -3840 277 274 96 73 chr2 114941637 114942158 -138314425 + L1ME3A LINE L1 2387 2919 -3227 1194 168 42 0 chr2 114942160 114942374 -138314209 + AluJb SINE Alu 73 295 -17 831 306 27 1 chr2 114942448 114942827 -138313756 + L1ME3A LINE L1 3964 4361 -1785 306 246 5 144 chr2 114942949 114943056 -138313527 + L1ME3A LINE L1 4456 4520 -1626 2343 79 0 0 chr2 114943056 114943359 -138313224 + AluSg SINE Alu 1 303 -7 306 246 5 144 chr2 114943359 114943466 -138313117 + L1ME3A LINE L1 4520 4640 -1506 491 299 62 51 chr2 114943471 114944039 -138312544 + L1ME3A LINE L1 4733 5306 -840 1168 149 19 212 chr2 114944151 114944575 -138312008 - MLT2D LTR ERVL 0 414 73 300 335 58 10 chr2 114944741 114944947 -138311636 + L1ME3A LINE L1 5683 5898 -272 745 199 8 0 chr2 114946961 114947092 -138309491 - FRAM SINE Alu -44 132 1 1433 231 115 62 chr2 114947258 114947773 -138308810 - MLT1F LTR MaLR 0 542 1 2047 186 17 3 chr2 114948124 114948484 -138308099 - MLT1A1 LTR MaLR 0 365 1 1012 85 0 0 chr2 114948620 114948750 -138307833 + AluSg SINE Alu 2 131 -179 2007 108 10 7 chr2 114948753 114949048 -138307535 + AluSg SINE Alu 1 296 -14 260 240 67 13 chr2 114949052 114949127 -138307456 + MIR SINE MIR 51 129 -79 4057 140 17 3 chr2 114949529 114950163 -138306420 - L1PA15 LINE L1 0 6165 5523 201 330 131 29 chr2 114950746 114950952 -138305631 - L2 LINE L2 -2 3270 3044 429 186 58 138 chr2 114951990 114952178 -138304405 + MER104 DNA Tc2 3 175 -5 584 165 92 9 chr2 114952766 114952875 -138303708 - MER103 DNA DNA -46 120 3 364 278 231 28 chr2 114954338 114954554 -138302029 + Charlie8 DNA MER1_type 17 276 -2141 291 247 141 106 chr2 114954642 114954812 -138301771 + MER91A DNA MER1_type 21 196 0 378 307 9 9 chr2 114955088 114955202 -138301381 - MIR SINE MIR -74 188 75 298 302 25 8 chr2 114955658 114955791 -138300792 + MIR SINE MIR 37 169 -72 1815 112 7 34 chr2 114956533 114956827 -138299756 + AluSx SINE Alu 20 305 -7 209 206 15 59 chr2 114957296 114957364 -138299219 + GA-rich Low_complexity Low_complexity 3 67 0 238 300 142 17 chr2 114957569 114957689 -138298894 - MIR SINE MIR -123 139 5 221 231 19 0 chr2 114958313 114958365 -138298218 - MIR3 SINE MIR -51 157 105 263 201 72 86 chr2 114958590 114958729 -138297854 - L1ME4a LINE L1 -21 6100 5964 1914 147 127 19 chr2 114958744 114959105 -138297478 + MER21A LTR ERV1 1 400 -531 1554 148 49 11 chr2 114959107 114959370 -138297213 + AluJb SINE Alu 1 273 -39 674 145 22 28 chr2 114959396 114959575 -138297008 + GA-rich Low_complexity Low_complexity 2 179 0 2668 149 51 61 chr2 114959602 114960147 -138296436 + MER21A LTR ERV1 390 929 -2 184 261 0 0 chr2 114961433 114961479 -138295104 - L2 LINE L2 -18 3254 3209 460 115 0 115 chr2 114961509 114961613 -138294970 + MER53 DNA DNA 4 95 -94 * 479 136 0 11 chr2 114961535 114961623 -138294960 - MER53 DNA DNA -8 181 95 384 221 183 0 chr2 114961659 114961790 -138294793 - MIR SINE MIR -80 182 28 184 266 13 101 chr2 114963484 114963563 -138293020 - L2 LINE L2 -32 3240 3169 393 289 25 33 chr2 114964403 114964524 -138292059 - L3b LINE CR1 -284 1299 1180 1093 127 0 0 chr2 114965207 114965373 -138291210 - FRAM SINE Alu 0 166 1 1810 168 40 72 chr2 114965375 114965451 -138291132 - MSTB LTR MaLR -35 391 314 1916 128 16 3 chr2 114965451 114965755 -138290828 + AluSg1 SINE Alu 2 309 0 1810 168 40 72 chr2 114965755 114966082 -138290501 - MSTB LTR MaLR -112 314 1 2348 91 0 0 chr2 114966470 114966777 -138289806 - AluSg SINE Alu -3 307 1 246 242 32 0 chr2 114967074 114967136 -138289447 + L2 LINE L2 3235 3298 -15 1606 177 34 12 chr2 114967555 114967883 -138288700 - L1MB8 LINE L1 -11 6167 5833 2058 154 5 46 chr2 114967887 114968276 -138288307 - L1MB8 LINE L1 -424 5754 5382 301 284 34 0 chr2 114968279 114968367 -138288216 + MER103 DNA DNA 75 165 -1 180 0 0 0 chr2 114968540 114968560 -138288023 + (TAA)n Simple_repeat Simple_repeat 3 22 0 351 240 0 0 chr2 114968563 114968638 -138287945 + MER34 LTR ERV1 22 96 -446 639 226 153 45 chr2 114968647 114968897 -138287686 + LTR29 LTR ERV1 142 604 -183 3621 148 78 11 chr2 114969499 114970127 -138286456 - LTR51 LTR ERV1 -1 670 1 2539 236 42 44 chr2 114970203 114971476 -138285107 + L1ME1 LINE L1 4737 5998 -168 518 263 33 0 chr2 114971543 114971695 -138284888 + L1MA10 LINE L1 6169 6325 -9 306 228 10 50 chr2 114971709 114971810 -138284773 + L1MC5 LINE L1 7704 7800 -161 22 35 0 0 chr2 114972747 114972776 -138283807 + AT_rich Low_complexity Low_complexity 1 29 0 1545 238 77 41 chr2 114972807 114973545 -138283038 + L1M4 LINE L1 30 815 -5727 3240 139 39 14 chr2 114973545 114974145 -138282438 + MER4B LTR ERV1 1 779 0 2705 194 39 22 chr2 114974145 114974820 -138281763 + L1M4 LINE L1 812 1497 -5045 8073 27 0 0 chr2 114974827 114975761 -138280822 - L1P LINE L1 -1263 4883 3950 654 236 204 39 chr2 114976093 114976373 -138280210 - MLT1I LTR MaLR -2 407 82 238 299 41 62 chr2 114976675 114976772 -138279811 + MIR SINE MIR 20 114 -94 202 143 102 41 chr2 114977270 114977319 -138279264 - L2 LINE L2 -1384 1930 1879 2177 100 7 0 chr2 114977659 114977949 -138278634 - AluSq SINE Alu -21 292 1 328 293 183 46 chr2 114978155 114978548 -138278035 + L2 LINE L2 2824 3270 -2 350 185 0 15 chr2 114979545 114979610 -138276973 - MER20 DNA MER1_type -24 195 132 187 235 98 69 chr2 114979611 114979713 -138276870 + MIR SINE MIR 60 164 -98 245 208 0 21 chr2 114980259 114980307 -138276276 + MER20 DNA MER1_type 1 47 -172 2393 83 0 3 chr2 114980349 114980649 -138275934 - AluSx SINE Alu -13 299 1 337 142 198 66 chr2 114981119 114981225 -138275358 + MER21B LTR ERV1 696 815 -48 21 0 0 0 chr2 114981626 114981647 -138274936 + AT_rich Low_complexity Low_complexity 1 21 0 1660 70 0 19 chr2 114982256 114982469 -138274114 + AluY SINE Alu 103 311 0 1262 245 122 50 chr2 114982470 114983566 -138273017 - L1ME LINE L1 -4386 2335 553 384 59 0 0 chr2 114983568 114983619 -138272964 + (TG)n Simple_repeat Simple_repeat 2 52 0 1667 181 53 15 chr2 114984427 114984765 -138271818 - MLT2D LTR ERVL -63 351 1 284 0 28 0 chr2 114985132 114985168 -138271415 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 2137 130 7 0 chr2 114985427 114985726 -138270857 + AluSx SINE Alu 1 301 -11 840 180 38 22 chr2 114986059 114986242 -138270341 + L1ME3 LINE L1 5321 5506 -658 1236 242 26 16 chr2 114986355 114987166 -138269417 - L1ME LINE L1 -2721 3819 2866 276 222 117 62 chr2 114987163 114987325 -138269258 - L1ME LINE L1 -5894 646 476 * 883 129 86 0 chr2 114987324 114987463 -138269120 - L1ME LINE L1 -6374 166 16 1804 112 0 4 chr2 114987932 114988173 -138268410 - AluSx SINE Alu -9 303 64 1850 167 13 3 chr2 114995373 114995673 -138260910 + AluSx SINE Alu 1 303 -9 1994 122 7 11 chr2 114995675 114996013 -138260570 + AluSx SINE Alu 1 337 0 1354 205 67 77 chr2 114997803 114997977 -138258606 + L1ME3 LINE L1 5722 5896 -266 2386 96 3 6 chr2 114997977 114998289 -138258294 + AluSx SINE Alu 1 311 -1 1354 205 67 77 chr2 114998289 114998534 -138258049 + L1ME3 LINE L1 5896 6137 -25 2451 145 26 17 chr2 114998534 114998954 -138257629 + MSTB LTR MaLR 1 424 -2 1354 205 67 77 chr2 114998954 114998978 -138257605 + L1ME3 LINE L1 6137 6160 -2 1108 210 52 58 chr2 114999766 115000109 -138256474 + L1MDa LINE L1 1485 1825 -4715 1839 114 4 15 chr2 115000109 115000381 -138256202 + AluSx SINE Alu 1 269 -43 368 280 0 11 chr2 115000448 115000541 -138256042 - L1MD2 LINE L1 -74 6565 6474 3914 232 56 29 chr2 115000546 115001097 -138255486 - L1MD2 LINE L1 -208 6431 5897 1989 187 14 11 chr2 115001097 115001461 -138255122 + MLT1A1 LTR MaLR 1 365 0 3914 232 56 29 chr2 115001461 115002826 -138253757 - L1MD2 LINE L1 -742 5897 4467 781 226 17 0 chr2 115002932 115003120 -138253463 + L1M4c LINE L1 1379 1649 -4733 243 296 129 23 chr2 115003983 115004115 -138252468 + MIR SINE MIR 110 255 -7 725 189 6 0 chr2 115004115 115004274 -138252309 + (TGG)n Simple_repeat Simple_repeat 2 161 0 1853 155 3 29 chr2 115006017 115006333 -138250250 + AluJb SINE Alu 5 312 0 503 234 56 0 chr2 115007149 115007256 -138249327 + MER81 DNA DNA 1 113 -1 291 132 19 0 chr2 115007992 115008045 -138248538 + MIR SINE MIR 90 143 -119 264 233 11 33 chr2 115008381 115008471 -138248112 + T-rich Low_complexity Low_complexity 3 90 0 3918 225 142 15 chr2 115009578 115009594 -138246989 - L1P5 LINE L1 -317 5837 5824 1540 117 0 0 chr2 115009594 115009799 -138246784 + AluSx SINE Alu 1 205 -107 3918 225 142 15 chr2 115009799 115010978 -138245605 - L1P5 LINE L1 -330 5824 4436 387 0 0 0 chr2 115010978 115011021 -138245562 + (TG)n Simple_repeat Simple_repeat 2 44 0 3918 225 142 15 chr2 115011021 115011379 -138245204 - L1P5 LINE L1 -1718 4436 4125 747 252 87 30 chr2 115011379 115011536 -138245047 - L1MD2 LINE L1 -2508 3918 3771 1724 166 21 7 chr2 115011536 115011819 -138244764 + AluJb SINE Alu 1 287 -25 747 252 87 30 chr2 115011819 115012120 -138244463 - L1MD2 LINE L1 -2655 3771 3421 181 219 31 31 chr2 115013936 115014000 -138242583 - L3b LINE CR1 -242 1341 1278 279 86 0 0 chr2 115014083 115014118 -138242465 + U2 snRNA snRNA 1 35 -153 1441 234 130 37 chr2 115014118 115014771 -138241812 + L1ME1 LINE L1 1195 1908 -4632 827 168 13 13 chr2 115014775 115014930 -138241653 - L1MD2 LINE L1 -5534 892 738 4517 148 46 158 chr2 115014930 115016478 -138240105 + MER52C LTR ERV1 1 1278 0 3466 169 42 84 chr2 115016478 115017231 -138239352 - L1MD2 LINE L1 -5685 741 20 * 10244 229 46 23 chr2 115017227 115019916 -138236667 + L1ME1 LINE L1 1895 4520 -2040 2247 129 25 25 chr2 115019916 115020280 -138236303 - THE1B LTR MaLR 0 364 1 10244 229 46 23 chr2 115020280 115020397 -138236186 + L1ME1 LINE L1 4520 4633 -1927 1762 176 3 10 chr2 115020397 115020698 -138235885 + AluSx SINE Alu 1 299 -13 10244 229 46 23 chr2 115020698 115022402 -138234181 + L1ME1 LINE L1 4633 6554 -6 183 151 27 123 chr2 115023423 115023496 -138233087 - MIR SINE MIR -191 71 6 961 299 113 16 chr2 115023889 115024517 -138232066 - L2 LINE L2 -659 2655 1967 335 304 72 16 chr2 115024614 115024739 -138231844 - L2 LINE L2 -5 3267 3136 311 271 12 0 chr2 115024778 115024863 -138231720 - MIR SINE MIR -81 181 96 1600 213 42 18 chr2 115025059 115025510 -138231073 + L1ME2 LINE L1 4824 5285 -861 242 108 27 0 chr2 115025847 115025884 -138230699 - MLT2C1 LTR ERVL -11 386 349 2649 144 126 8 chr2 115025888 115026373 -138230210 - Tigger3(Golem) DNA MER2_type -1 3028 2487 265 196 20 0 chr2 115026578 115026629 -138229954 + Tigger3(Golem) DNA MER2_type 49 100 -2929 * 2775 122 19 2 chr2 115026625 115027036 -138229547 + Tigger3(Golem) DNA MER2_type 2591 3008 -21 1283 240 69 22 chr2 115027052 115027415 -138229168 + L1ME2 LINE L1 5783 6162 -2 277 217 194 16 chr2 115028185 115028314 -138228269 - MLT1K LTR MaLR -297 291 140 237 297 18 36 chr2 115029204 115029315 -138227268 - L2 LINE L2 -221 3051 2943 279 146 36 0 chr2 115029556 115029611 -138226972 + MER113 DNA MER1_type? 152 208 -313 220 324 0 0 chr2 115029713 115029781 -138226802 - L2 LINE L2 -560 2754 2687 1700 167 103 88 chr2 115030340 115030748 -138225835 + MLT2C2 LTR ERVL 1 414 0 515 239 133 93 chr2 115030808 115030840 -138225743 - MLT1G1 LTR MaLR -32 523 494 2395 78 0 28 chr2 115030840 115031160 -138225423 + AluY SINE Alu 1 311 0 515 239 133 93 chr2 115031160 115031645 -138224938 - MLT1G1 LTR MaLR -61 494 16 351 299 51 8 chr2 115032273 115032390 -138224193 + MER5B DNA MER1_type 57 178 0 1440 205 112 9 chr2 115033501 115033832 -138222751 - MLT1A1 LTR MaLR 0 365 1 432 241 43 43 chr2 115034799 115034915 -138221668 + L2 LINE L2 3198 3313 0 198 0 0 0 chr2 115035002 115035024 -138221559 + (A)n Simple_repeat Simple_repeat 1 22 0 242 319 121 13 chr2 115035115 115035272 -138221311 + L1ME LINE L1 5531 5704 -417 671 250 50 6 chr2 115036162 115036322 -138220261 - MER5B DNA MER1_type -2 176 10 387 296 25 31 chr2 115036443 115036602 -138219981 + MIR SINE MIR 35 192 -70 1967 153 46 14 chr2 115036887 115037234 -138219349 - MLT1A1 LTR MaLR 0 365 8 581 306 10 10 chr2 115038251 115038450 -138218133 - MIR SINE MIR -62 200 2 247 271 103 37 chr2 115038481 115038588 -138217995 + MER5A DNA MER1_type 19 132 -57 2207 109 26 0 chr2 115038877 115039181 -138217402 - AluSx SINE Alu 0 312 1 1369 211 187 48 chr2 115039938 115040440 -138216143 + MLT1G1 LTR MaLR 22 593 -2 235 208 0 0 chr2 115040728 115040776 -138215807 + (TG)n Simple_repeat Simple_repeat 2 49 0 201 321 12 0 chr2 115041100 115041184 -138215399 + CT-rich Low_complexity Low_complexity 1 85 0 337 248 147 8 chr2 115042088 115042217 -138214366 - MIR SINE MIR -112 150 4 233 324 0 0 chr2 115042312 115042380 -138214203 - L2 LINE L2 -249 3023 2956 458 248 71 7 chr2 115042801 115042942 -138213641 + MIR SINE MIR 1 150 -112 822 294 45 88 chr2 115044084 115044503 -138212080 + MLT1I LTR MaLR 1 401 -8 194 339 46 0 chr2 115045075 115045140 -138211443 - L2 LINE L2 -1 3271 3204 1695 316 158 17 chr2 115045583 115047137 -138209446 - L2 LINE L2 -768 2546 775 595 250 87 16 chr2 115047307 115047491 -138209092 + MIR SINE MIR 27 223 -39 984 228 100 48 chr2 115047513 115047600 -138208983 + MLT1C LTR MaLR 1 82 -385 1706 150 0 0 chr2 115047600 115047866 -138208717 - AluSx SINE Alu -17 295 30 984 228 100 48 chr2 115047866 115048249 -138208334 + MLT1C LTR MaLR 82 463 -4 1461 178 0 11 chr2 115048849 115049125 -138207458 + AluJb SINE Alu 33 305 -7 195 42 0 0 chr2 115050043 115050067 -138206516 + (TCTG)n Simple_repeat Simple_repeat 2 25 0 347 280 170 0 chr2 115050480 115050580 -138206003 - L2 LINE L2 -6 3266 3150 395 282 83 6 chr2 115050733 115050889 -138205694 - L2 LINE L2 -253 3060 2893 2209 108 16 0 chr2 115051337 115051642 -138204941 + AluSg SINE Alu 1 310 0 233 234 0 0 chr2 115051747 115051794 -138204789 - L2 LINE L2 -3 3310 3264 410 325 108 0 chr2 115052849 115053006 -138203577 + MER5B DNA MER1_type 1 174 -4 1582 167 78 82 chr2 115053621 115054070 -138202513 - L1MC4 LINE L1 0 8042 7596 183 237 0 0 chr2 115054071 115054109 -138202474 + L2 LINE L2 2712 2749 -565 298 280 236 35 chr2 115054252 115054570 -138202013 + L2 LINE L2 2932 3313 0 661 318 41 25 chr2 115056296 115056541 -138200042 + MIR SINE MIR 14 262 0 237 238 32 0 chr2 115057365 115057428 -138199155 - LTR67 LTR ERVL -3 554 490 371 311 171 33 chr2 115058034 115058397 -138198186 + L1M4 LINE L1 4733 5145 -1001 1286 60 0 6 chr2 115058397 115058565 -138198018 - AluY SINE Alu 0 311 145 1607 204 57 57 chr2 115058621 115059115 -138197468 + L1ME2 LINE L1 5658 6151 -13 361 265 82 31 chr2 115059158 115059354 -138197229 + L1MC4 LINE L1 7836 8041 -1 370 226 239 18 chr2 115059360 115059561 -138197022 + L1M4 LINE L1 5196 5435 -749 203 0 37 0 chr2 115059887 115059914 -138196669 + (CA)n Simple_repeat Simple_repeat 2 29 0 22 35 0 0 chr2 115063198 115063227 -138193356 + AT_rich Low_complexity Low_complexity 1 29 0 207 0 0 0 chr2 115065243 115065266 -138191317 + (A)n Simple_repeat Simple_repeat 1 23 0 1600 156 106 25 chr2 115067873 115068232 -138188351 + MLT1B LTR MaLR 3 390 0 187 281 116 33 chr2 115069750 115069871 -138186712 - MIR SINE MIR -74 188 58 37 62 0 0 chr2 115070538 115070603 -138185980 + AT_rich Low_complexity Low_complexity 1 65 0 2306 213 89 45 chr2 115074221 115075090 -138181493 + L1MC4 LINE L1 6879 8040 -2 2062 107 10 3 chr2 115075741 115076032 -138180551 - AluSq SINE Alu -20 293 1 1971 118 4 0 chr2 115077926 115078245 -138178338 + AluSc SINE Alu 1 320 0 197 246 82 16 chr2 115078454 115078515 -138178068 + L3 LINE CR1 1378 1442 -135 306 274 115 26 chr2 115081126 115081239 -138175344 - L2 LINE L2 -4 3309 3187 405 0 0 0 chr2 115081732 115081777 -138174806 + (TG)n Simple_repeat Simple_repeat 1 45 0 180 0 0 0 chr2 115081776 115081796 -138174787 + (GA)n Simple_repeat Simple_repeat 1 20 0 * 233 204 20 0 chr2 115082490 115082539 -138174044 + LTR26B LTR ERV1 251 300 -231 195 42 0 0 chr2 115083183 115083207 -138173376 + (A)n Simple_repeat Simple_repeat 1 24 0 243 341 78 11 chr2 115085486 115085665 -138170918 - L3 LINE CR1 -107 1470 1280 2261 107 0 7 chr2 115087125 115087425 -138169158 + AluSq SINE Alu 1 298 -15 4099 17 2 0 chr2 115087456 115087919 -138168664 - L1PA2 LINE L1 -7 6148 5685 2250 117 7 3 chr2 115090816 115091125 -138165458 + AluSx SINE Alu 1 310 -2 180 0 0 0 chr2 115091472 115091492 -138165091 + (A)n Simple_repeat Simple_repeat 1 20 0 1181 209 177 3 chr2 115092306 115092617 -138163966 + MLT1A1 LTR MaLR 1 365 0 468 283 52 83 chr2 115092637 115093156 -138163427 + L1MDa LINE L1 5 507 -6033 4007 214 79 32 chr2 115093826 115095787 -138160796 + L1M2c LINE L1 1394 3427 -3113 4383 106 84 99 chr2 115095824 115096080 -138160503 + MER4B-int LTR ERV1 4841 5099 -1309 454 202 0 0 chr2 115096080 115096164 -138160419 + L1M4 LINE L1 2708 2791 -3355 4383 106 84 99 chr2 115096164 115096811 -138159772 + MER4B-int LTR ERV1 5099 5776 -632 927 204 14 80 chr2 115096810 115097072 -138159511 + MER4B-int LTR ERV1 4755 6064 -257 * 1887 171 64 6 chr2 115097083 115097429 -138159154 + LTR47A LTR ERVL 1 366 -86 2905 253 92 43 chr2 115097440 115098704 -138157879 + L1M2c LINE L1 3422 4746 -1794 2348 95 10 0 chr2 115098722 115099027 -138157556 + AluSx SINE Alu 1 308 -4 2929 182 51 11 chr2 115099081 115099692 -138156891 + L1MD2 LINE L1 5722 6356 -3 435 195 23 31 chr2 115100186 115100314 -138156269 - MER33 DNA MER1_type 0 363 237 580 196 29 0 chr2 115100337 115100439 -138156144 + L1MD2 LINE L1 6002 6106 -253 4307 158 16 8 chr2 115100446 115101187 -138155396 + L1MB2 LINE L1 5417 6163 -8 695 184 103 6 chr2 115101194 115101368 -138155215 - MER33 DNA MER1_type -107 217 27 186 43 0 0 chr2 115101687 115101710 -138154873 + (A)n Simple_repeat Simple_repeat 1 23 0 588 313 111 10 chr2 115103793 115104100 -138152483 + MER102b DNA MER1_type 4 341 0 2363 88 3 0 chr2 115104497 115104793 -138151790 + AluY SINE Alu 1 297 -14 239 244 18 36 chr2 115106346 115106514 -138150069 + (CCG)n Simple_repeat Simple_repeat 1 165 0 453 36 0 0 chr2 115108065 115108120 -138148463 + (CGG)n Simple_repeat Simple_repeat 2 56 0 25 31 0 0 chr2 115108285 115108317 -138148266 + GC_rich Low_complexity Low_complexity 1 32 0 265 231 0 15 chr2 115111806 115111871 -138144712 + C-rich Low_complexity Low_complexity 4 67 0 210 250 125 9 chr2 115113073 115113185 -138143398 + L3 LINE CR1 1258 1382 -195 24 0 0 0 chr2 115113669 115113693 -138142890 + AT_rich Low_complexity Low_complexity 1 24 0 776 242 58 82 chr2 115114622 115114986 -138141597 + MLT1H LTR MaLR 95 449 -100 398 308 148 6 chr2 115115694 115115876 -138140707 - MIR SINE MIR -8 254 47 1957 156 0 7 chr2 115117694 115118001 -138138582 + AluJb SINE Alu 8 312 0 691 254 68 63 chr2 115118847 115119045 -138137538 + L1MEc LINE L1 775 971 -5234 2341 118 3 0 chr2 115119045 115119351 -138137232 + AluSx SINE Alu 1 307 -5 691 254 68 63 chr2 115119351 115119710 -138136873 + L1MEc LINE L1 971 1221 -4984 844 210 93 68 chr2 115120026 115120346 -138136237 + L1ME2 LINE L1 5789 6121 -43 2409 82 10 3 chr2 115120346 115120651 -138135932 + AluSp SINE Alu 1 307 -6 844 210 93 68 chr2 115120651 115120696 -138135887 + L1ME2 LINE L1 6121 6163 -1 2250 102 3 3 chr2 115121235 115121573 -138135010 + AluSp SINE Alu 1 313 0 5226 231 84 24 chr2 115121586 115123211 -138133372 + L1MD1 LINE L1 24 1883 -4657 4623 209 53 39 chr2 115123212 115125254 -138131329 + L1MD1 LINE L1 4585 6636 0 2173 111 0 19 chr2 115125699 115126014 -138130569 - AluSx SINE Alu -3 309 1 275 259 18 36 chr2 115130005 115130117 -138126466 + MIR SINE MIR 88 197 -65 2393 184 95 78 chr2 115130249 115130587 -138125996 - L1MD3 LINE L1 0 7995 7664 1505 128 22 4 chr2 115130587 115130813 -138125770 - MER30 DNA MER1_type 0 230 1 2393 184 95 78 chr2 115130813 115131048 -138125535 - L1MD3 LINE L1 -331 7664 7435 467 186 0 62 chr2 115131048 115131145 -138125438 - MLT1F1 LTR MaLR -442 125 35 2393 184 95 78 chr2 115131145 115131570 -138125013 - L1MD3 LINE L1 -560 7435 6686 355 240 67 19 chr2 115131625 115131729 -138124854 + MIR SINE MIR 74 182 -80 235 236 0 0 chr2 115131791 115131846 -138124737 + L1ME LINE L1 93 147 -5972 412 313 72 34 chr2 115132296 115132503 -138124080 + L1ME LINE L1 710 934 -5185 2024 87 0 23 chr2 115132503 115132814 -138123769 + AluSg SINE Alu 21 325 0 412 313 72 34 chr2 115132814 115132896 -138123687 + L1ME LINE L1 934 1011 -5108 2076 133 3 0 chr2 115133335 115133644 -138122939 + AluSx SINE Alu 3 312 0 800 238 191 65 chr2 115133847 115134298 -138122285 + MLT1H1 LTR MaLR 1 493 -62 1962 171 80 24 chr2 115134298 115134673 -138121910 + MSTD LTR MaLR 1 396 0 800 238 191 65 chr2 115134673 115134745 -138121838 + MLT1H1 LTR MaLR 493 555 0 2005 138 6 3 chr2 115135130 115135441 -138121142 - AluSx SINE Alu 0 312 1 484 263 5 52 chr2 115136319 115136513 -138120070 - L1MC5 LINE L1 -25 7936 7752 552 237 103 16 chr2 115136779 115136973 -138119610 - L1MC5 LINE L1 -49 7912 7702 23 54 0 0 chr2 115137438 115137475 -138119108 + AT_rich Low_complexity Low_complexity 1 37 0 233 310 28 0 chr2 115137606 115137677 -138118906 - L3 LINE CR1 -5 1572 1500 817 263 72 107 chr2 115137677 115138217 -138118366 - LTR33 LTR ERVL 0 521 1 183 256 0 0 chr2 115138217 115138260 -138118323 - L3 LINE CR1 -73 1504 1462 645 315 70 41 chr2 115138860 115139273 -138117310 - L3 LINE CR1 -208 1369 945 25 0 0 0 chr2 115139411 115139436 -138117147 + AT_rich Low_complexity Low_complexity 1 25 0 191 331 44 87 chr2 115139645 115139694 -138116889 - L3 LINE CR1 -1118 459 409 2251 68 7 4 chr2 115139694 115140003 -138116580 - AluSc SINE Alu 0 312 3 191 331 44 87 chr2 115140003 115140227 -138116356 - L3 LINE CR1 -1168 409 197 16285 165 19 29 chr2 115140229 115144345 -138112238 - L1PA13 LINE L1 -1 6162 2096 459 0 0 0 chr2 115144714 115144765 -138111818 + (TG)n Simple_repeat Simple_repeat 2 52 0 909 128 0 23 chr2 115144846 115144979 -138111604 - FLAM_C SINE Alu -3 130 1 297 287 58 0 chr2 115145080 115145167 -138111416 - MIR SINE MIR -2 260 169 2385 201 95 28 chr2 115145189 115145756 -138110827 + MER77 LTR ERV1 1 605 0 14318 93 4 3 chr2 115145829 115148511 -138108072 - L1PA7 LINE L1 -1 6153 3481 4272 74 29 0 chr2 115148515 115149112 -138107471 + L1PA7 LINE L1 2849 3462 -2684 233 370 0 0 chr2 115149264 115149356 -138107227 + L1MD2 LINE L1 370 461 -5935 1165 153 32 103 chr2 115149650 115149932 -138106651 + L1PB4 LINE L1 5887 6148 -8 7558 221 59 43 chr2 115150041 115150460 -138106123 + L1MD2 LINE L1 765 1176 -5230 2130 140 3 0 chr2 115150460 115150768 -138105815 + AluSx SINE Alu 1 309 -3 7558 221 59 43 chr2 115150768 115151877 -138104706 + L1MD2 LINE L1 1176 2266 -4140 1905 224 85 35 chr2 115151877 115152358 -138104225 + MLT1D LTR MaLR 1 505 0 7558 221 59 43 chr2 115152358 115154139 -138102444 + L1MD2 LINE L1 2266 4086 -2320 1657 195 0 0 chr2 115154139 115154421 -138102162 + AluJb SINE Alu 11 292 -20 7558 221 59 43 chr2 115154421 115155386 -138101197 + L1MD2 LINE L1 4086 5034 -1372 898 220 63 0 chr2 115155501 115155779 -138100804 + L1MD2 LINE L1 5588 5914 -743 745 172 141 42 chr2 115155781 115155973 -138100610 + MER20 DNA MER1_type 1 211 -8 1600 211 7 16 chr2 115155986 115156397 -138100186 + L1MD2 LINE L1 5909 6311 -115 195 308 179 31 chr2 115156557 115156752 -138099831 + L2 LINE L2 3044 3267 -5 3640 114 34 19 chr2 115157764 115158301 -138098282 - L1PA13 LINE L1 -18 6145 5601 1054 154 86 64 chr2 115158798 115158958 -138097625 + MLT1B LTR MaLR 1 169 -221 2275 115 0 6 chr2 115158958 115159270 -138097313 + AluSx SINE Alu 1 310 -2 1054 154 86 64 chr2 115159270 115159343 -138097240 + MLT1B LTR MaLR 169 239 -151 264 267 171 9 chr2 115160527 115160632 -138095951 + L2 LINE L2 3144 3265 -7 458 295 70 38 chr2 115161090 115161432 -138095151 - L1M4 LINE L1 -3190 2956 2604 9383 209 72 48 chr2 115161779 115163700 -138092883 - L1MD1 LINE L1 -3 6633 4759 1741 166 31 54 chr2 115163700 115163951 -138092632 - MER2 DNA MER2_type -1 343 101 2477 66 0 0 chr2 115163951 115164253 -138092330 - AluY SINE Alu -9 302 1 1741 166 31 54 chr2 115164253 115164351 -138092232 - MER2 DNA MER2_type -243 101 2 9383 209 72 48 chr2 115164351 115168890 -138087693 - L1MD1 LINE L1 -1877 4759 27 1517 194 33 20 chr2 115169145 115169449 -138087134 - AluJo SINE Alu -4 308 1 625 309 32 52 chr2 115171257 115171509 -138085074 + L2 LINE L2 3011 3257 -15 2432 86 0 0 chr2 115171599 115171901 -138084682 - AluY SINE Alu -9 302 1 21 0 0 0 chr2 115171901 115171922 -138084661 + AT_rich Low_complexity Low_complexity 1 21 0 789 174 0 0 chr2 115172193 115172314 -138084269 - FRAM SINE Alu -15 161 41 239 234 0 0 chr2 115172379 115172426 -138084157 + L2 LINE L2 3258 3304 -9 503 221 21 64 chr2 115174930 115175070 -138081513 - MER94 DNA DNA 0 134 1 422 283 46 17 chr2 115175256 115175429 -138081154 - MIR3 SINE MIR -15 193 16 22 0 0 0 chr2 115176615 115176637 -138079946 + AT_rich Low_complexity Low_complexity 1 22 0 2127 121 0 3 chr2 115176638 115176928 -138079655 + AluSx SINE Alu 1 289 -23 188 175 158 18 chr2 115179357 115179414 -138077169 + L2 LINE L2 2740 2804 -510 2907 91 11 8 chr2 115181643 115182017 -138074566 + THE1C LTR MaLR 1 375 0 426 271 25 8 chr2 115182053 115182175 -138074408 + MIR SINE MIR 23 146 -116 1579 60 51 5 chr2 115182784 115183001 -138073582 - THE1C LTR MaLR -26 349 123 972 280 186 7 chr2 115183974 115184403 -138072180 + MER115 DNA AcHobo 110 615 -78 287 297 100 60 chr2 115187640 115187940 -138068643 + L2 LINE L2 2944 3255 -17 21 36 0 0 chr2 115189662 115189690 -138066893 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 115190035 115190059 -138066524 + AT_rich Low_complexity Low_complexity 1 24 0 550 290 58 10 chr2 115190135 115190342 -138066241 + MIR SINE MIR 40 256 -6 234 282 39 13 chr2 115190339 115190417 -138066166 - MIR SINE MIR -24 238 159 * 352 330 162 11 chr2 115190630 115190821 -138065762 + MIR SINE MIR 31 250 -12 276 77 0 0 chr2 115192045 115192084 -138064499 + (TCCC)n Simple_repeat Simple_repeat 3 41 0 1290 67 6 0 chr2 115193242 115193407 -138063176 + AluY SINE Alu 1 166 -145 535 79 26 0 chr2 115193411 115193487 -138063096 + AluSg/x SINE Alu 219 296 -13 793 311 15 23 chr2 115194115 115194379 -138062204 - MIR SINE MIR 0 262 1 1055 180 33 14 chr2 115196005 115196216 -138060367 - MER20 DNA MER1_type -4 215 1 613 260 120 0 chr2 115199277 115199477 -138057106 - MIR SINE MIR -37 225 2 779 220 43 0 chr2 115199766 115199952 -138056631 + L1MC3 LINE L1 4001 4194 -1952 336 154 0 0 chr2 115199952 115200004 -138056579 + Alu SINE Alu 1 52 -250 641 168 80 32 chr2 115200006 115200131 -138056452 + AluJb SINE Alu 173 303 -9 3253 217 70 55 chr2 115200131 115200195 -138056388 + L1MC3 LINE L1 4185 4247 -1919 1460 183 0 17 chr2 115200195 115200505 -138056078 - AluJo SINE Alu 0 305 1 3253 217 70 55 chr2 115200505 115200525 -138056058 + L1MC3 LINE L1 4247 4265 -1901 3033 157 8 60 chr2 115200525 115200788 -138055795 + MER41D LTR ERV1 1 276 -281 2221 104 0 0 chr2 115200788 115201085 -138055498 + AluSg SINE Alu 1 297 -13 3033 157 8 60 chr2 115201085 115201214 -138055369 + MER41D LTR ERV1 276 410 -147 1925 128 14 3 chr2 115201214 115201510 -138055073 + AluJb SINE Alu 3 301 -11 3033 157 8 60 chr2 115201510 115201703 -138054880 + MER41D LTR ERV1 410 557 0 3253 217 70 55 chr2 115201703 115203486 -138053097 + L1MC3 LINE L1 4265 6151 -15 45 19 0 0 chr2 115203488 115203540 -138053043 + AT_rich Low_complexity Low_complexity 1 52 0 1646 215 99 0 chr2 115203777 115204201 -138052382 - MLT1C LTR MaLR 0 467 2 219 204 23 0 chr2 115205524 115205568 -138051015 + T-rich Low_complexity Low_complexity 3 47 0 273 75 0 0 chr2 115205944 115205984 -138050599 + (TG)n Simple_repeat Simple_repeat 1 40 0 2098 98 0 38 chr2 115206020 115206335 -138050248 - AluSq SINE Alu -10 303 1 221 289 205 0 chr2 115207455 115207538 -138049045 - L2 LINE L2 -11 3261 3162 216 285 111 77 chr2 115207830 115208037 -138048546 + L2 LINE L2 2878 3091 -181 2043 125 7 0 chr2 115208246 115208549 -138048034 + AluSx SINE Alu 3 307 -5 246 304 0 0 chr2 115210148 115210217 -138046366 + C-rich Low_complexity Low_complexity 4 72 0 5617 247 79 38 chr2 115211957 115212167 -138044416 - L1ME2 LINE L1 -9 6155 5955 1730 174 0 10 chr2 115212167 115212478 -138044105 + AluJo SINE Alu 1 308 -4 5617 247 79 38 chr2 115212478 115214853 -138041730 - L1ME2 LINE L1 -209 5955 3401 2172 108 7 0 chr2 115214853 115215159 -138041424 - AluSx SINE Alu -4 308 1 5617 247 79 38 chr2 115215159 115215856 -138040727 - L1ME2 LINE L1 -2763 3401 2734 1153 150 53 5 chr2 115215946 115216153 -138040430 - Tigger1 DNA MER2_type 0 2418 2202 796 186 14 7 chr2 115216151 115216296 -138040287 - Tigger1 DNA MER2_type -2271 147 2 * 3097 190 82 77 chr2 115217194 115218096 -138038487 - L1ME1 LINE L1 -5 6161 5255 389 298 87 12 chr2 115218453 115218614 -138037969 + Charlie8 DNA MER1_type 4 176 -2241 29 70 0 0 chr2 115218988 115219045 -138037538 + AT_rich Low_complexity Low_complexity 1 57 0 331 288 55 14 chr2 115219627 115219773 -138036810 + (CATG)n Simple_repeat Simple_repeat 3 154 0 286 268 0 14 chr2 115219786 115219928 -138036655 + (TG)n Simple_repeat Simple_repeat 1 140 0 251 27 0 27 chr2 115221533 115221570 -138035013 + (TTG)n Simple_repeat Simple_repeat 1 36 0 1496 96 5 9 chr2 115221570 115221788 -138034795 - AluSg SINE Alu -33 277 61 313 256 33 0 chr2 115222036 115222126 -138034457 - MIR SINE MIR -75 187 95 1174 190 58 82 chr2 115223771 115224228 -138032355 - MER39 LTR ERV1 0 707 67 674 178 0 0 chr2 115224609 115224716 -138031867 - FLAM_C SINE Alu -35 108 2 192 281 37 61 chr2 115225453 115225535 -138031048 - L2 LINE L2 -648 2666 2587 2249 109 3 0 chr2 115225933 115226244 -138030339 - AluSx SINE Alu 0 312 1 1538 153 22 104 chr2 115226452 115226818 -138029765 - MLT1A1 LTR MaLR 0 365 30 1966 233 29 42 chr2 115226922 115227439 -138029144 - L1ME1 LINE L1 -962 5184 4662 284 0 28 0 chr2 115227439 115227475 -138029108 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2056 99 0 0 chr2 115227476 115227749 -138028834 - AluSx SINE Alu -39 273 1 1966 233 29 42 chr2 115227749 115227855 -138028728 - L1ME1 LINE L1 -1483 4663 4567 202 267 0 0 chr2 115230390 115230450 -138026133 + (CA)n Simple_repeat Simple_repeat 2 61 0 336 48 0 0 chr2 115230549 115230591 -138025992 + (TG)n Simple_repeat Simple_repeat 1 42 0 2654 177 18 6 chr2 115231191 115231688 -138024895 + L1MB3 LINE L1 5551 6053 -130 239 211 0 26 chr2 115232652 115232728 -138023855 + CT-rich Low_complexity Low_complexity 2 75 0 413 279 44 32 chr2 115233410 115233568 -138023015 - MIR SINE MIR -32 230 71 2465 44 0 0 chr2 115236172 115236447 -138020136 - AluY SINE Alu -14 297 23 767 156 59 7 chr2 115237420 115237555 -138019028 - MLT1B LTR MaLR -5 462 321 1215 137 22 112 chr2 115237555 115237842 -138018741 + LTR12 LTR ERV1 7 1683 -484 403 177 211 57 chr2 115237818 115237993 -138018590 + LTR12 LTR ERV1 76 277 -437 * 242 177 145 0 chr2 115237993 115238055 -138018528 + LTR30 LTR ERV1 544 614 -108 847 147 23 0 chr2 115238055 115238184 -138018399 + LTR12 LTR ERV1 349 480 -234 976 210 44 59 chr2 115238195 115238466 -138018117 - MLT1B LTR MaLR -121 269 3 216 259 0 19 chr2 115238533 115238587 -138017996 + GA-rich Low_complexity Low_complexity 3 55 0 333 322 34 43 chr2 115239801 115240127 -138016456 - L1ME4a LINE L1 -67 6054 5732 689 84 0 0 chr2 115240498 115240593 -138015990 + L1PA13 LINE L1 6067 6161 -2 2015 125 36 9 chr2 115240605 115240942 -138015641 + L1MA6 LINE L1 5954 6299 -1 4389 165 44 28 chr2 115241097 115241899 -138014684 + L1MB7 LINE L1 4647 5482 -702 2113 141 0 0 chr2 115241899 115242196 -138014387 - AluSx SINE Alu -11 301 5 4389 165 44 28 chr2 115242196 115242911 -138013672 + L1MB7 LINE L1 5482 6184 0 252 305 19 19 chr2 115245085 115245190 -138011393 + MIR SINE MIR 41 145 -63 186 167 0 0 chr2 115245283 115245319 -138011264 + (TTG)n Simple_repeat Simple_repeat 2 37 0 187 385 45 32 chr2 115245704 115245925 -138010658 - L3b LINE CR1 -236 1347 1124 357 208 52 0 chr2 115246231 115246327 -138010256 - MER5A DNA MER1_type -54 135 35 354 341 7 0 chr2 115246764 115246899 -138009684 + L2 LINE L2 3137 3272 0 680 119 60 0 chr2 115248405 115248573 -138008010 + (TCCA)n Simple_repeat Simple_repeat 3 180 0 2607 105 11 5 chr2 115248676 115249049 -138007534 - THE1C LTR MaLR 0 375 1 510 17 0 0 chr2 115249641 115249700 -138006883 + (CA)n Simple_repeat Simple_repeat 1 59 0 2299 74 6 3 chr2 115250224 115250536 -138006047 - L1PA14 LINE L1 -2 6159 5847 478 324 17 12 chr2 115251684 115251857 -138004726 - MIR SINE MIR 0 262 89 2745 101 8 11 chr2 115252876 115253252 -138003331 - THE1C LTR MaLR 0 375 1 301 232 137 11 chr2 115253784 115253879 -138002704 + L2 LINE L2 3148 3254 -18 1043 166 6 3 chr2 115253883 115254208 -138002375 + (TGGA)n Simple_repeat Simple_repeat 3 327 0 230 287 33 49 chr2 115254717 115254839 -138001744 + L2 LINE L2 2867 2986 -286 180 0 0 0 chr2 115255867 115255887 -138000696 + (T)n Simple_repeat Simple_repeat 1 20 0 2267 94 10 7 chr2 115256027 115256324 -138000259 + AluSx SINE Alu 1 298 -14 752 201 11 0 chr2 115256328 115256502 -138000081 + (TATATG)n Simple_repeat Simple_repeat 5 180 0 415 274 131 30 chr2 115256847 115257084 -137999499 + L3 LINE CR1 986 1246 -331 253 318 45 8 chr2 115257132 115257264 -137999319 - L2 LINE L2 -494 2820 2684 335 286 35 47 chr2 115257791 115257962 -137998621 + MIR SINE MIR 61 229 -33 226 303 0 13 chr2 115258001 115258077 -137998506 - MIR SINE MIR -164 98 24 270 122 41 0 chr2 115259521 115259570 -137997013 - L1MC3 LINE L1 -552 7167 7117 283 214 0 0 chr2 115259573 115259629 -137996954 - MLT1F1 LTR MaLR -477 90 35 8925 192 70 34 chr2 115259629 115260885 -137995698 - L1MC3 LINE L1 -688 7031 5822 2317 98 7 0 chr2 115260885 115261181 -137995402 + AluSx SINE Alu 1 298 -14 8925 192 70 34 chr2 115261181 115262418 -137994165 - L1MC3 LINE L1 -1897 5822 4417 2792 254 35 42 chr2 115262423 115263440 -137993143 - L1MC3 LINE L1 -5058 1012 3 310 308 138 6 chr2 115264257 115264416 -137992167 + MIR SINE MIR 66 245 -17 222 174 0 0 chr2 115264653 115264699 -137991884 + T-rich Low_complexity Low_complexity 1 46 0 346 277 109 74 chr2 115265775 115265900 -137990683 - L1ME4a LINE L1 -249 5872 5753 1826 175 0 3 chr2 115265900 115266186 -137990397 - AluJb SINE Alu -27 285 1 346 277 109 74 chr2 115266186 115266410 -137990173 - L1ME4a LINE L1 -368 5753 5511 506 282 63 6 chr2 115266493 115266667 -137989916 - MIR SINE MIR -19 243 60 2336 102 3 0 chr2 115266731 115267025 -137989558 - AluSp SINE Alu -18 295 1 200 206 0 0 chr2 115268272 115268306 -137988277 + polypyrimidine Low_complexity Low_complexity 3 36 0 2401 75 0 0 chr2 115268453 115268747 -137987836 - AluY SINE Alu -17 294 1 3742 231 72 15 chr2 115268827 115269901 -137986682 + L1ME LINE L1 3918 5052 -1094 550 200 282 6 chr2 115269901 115269937 -137986646 + AluJo SINE Alu 81 106 -206 183 42 0 0 chr2 115269937 115269961 -137986622 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 550 200 282 6 chr2 115269961 115270094 -137986489 + AluJo SINE Alu 106 297 -15 493 271 42 42 chr2 115270095 115270171 -137986412 + L1ME LINE L1 5061 5136 -1010 2906 22 0 0 chr2 115270171 115270487 -137986096 + AluYb8 SINE Alu 1 316 -2 493 271 42 42 chr2 115270487 115270602 -137985981 + L1ME LINE L1 5135 5252 -894 1611 282 88 48 chr2 115270711 115271920 -137984663 - L1MEc LINE L1 -4480 1916 660 2353 107 7 0 chr2 115272294 115272604 -137983979 - AluSx SINE Alu 0 312 1 4158 230 66 31 chr2 115272713 115274603 -137981980 + L1MC4a LINE L1 5116 7203 -605 348 321 30 0 chr2 115274603 115274734 -137981849 + MIR3 SINE MIR 58 192 -16 234 232 36 0 chr2 115274779 115274835 -137981748 + CT-rich Low_complexity Low_complexity 1 58 0 2305 120 0 0 chr2 115274978 115275279 -137981304 + AluSx SINE Alu 1 301 -11 2442 87 0 10 chr2 115278257 115278569 -137978014 - AluSg SINE Alu -1 309 1 1215 169 29 0 chr2 115278846 115279053 -137977530 + MER46A DNA MER2_type 1 213 -23 21 0 0 0 chr2 115279060 115279081 -137977502 + AT_rich Low_complexity Low_complexity 1 21 0 251 261 9 87 chr2 115279189 115279304 -137977279 + L1ME LINE L1 5507 5612 -509 931 219 328 22 chr2 115279513 115279928 -137976655 - MLT1F LTR MaLR 0 542 1 600 286 39 60 chr2 115279985 115280268 -137976315 - MLT1F-int LTR MaLR -72 1299 1023 261 0 0 0 chr2 115280420 115280449 -137976134 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 340 335 19 26 chr2 115280489 115280644 -137975939 - MLT1F-int LTR MaLR -493 878 725 1667 218 53 31 chr2 115280914 115281364 -137975219 + MLT1C LTR MaLR 8 467 0 612 254 40 36 chr2 115281423 115281675 -137974908 - MLT1F-int LTR MaLR -828 543 291 1431 211 132 57 chr2 115281829 115282322 -137974261 - MLT1F LTR MaLR 0 542 13 1785 203 24 13 chr2 115282421 115282800 -137973783 + MLT1B LTR MaLR 8 390 0 1782 151 21 7 chr2 115283779 115284063 -137972520 - AluJo SINE Alu -24 288 1 244 307 57 49 chr2 115284110 115284354 -137972229 - HAL1b LINE L1 -651 697 452 2369 109 0 0 chr2 115286312 115286616 -137969967 - AluSx SINE Alu -8 304 1 27 81 0 0 chr2 115286707 115286769 -137969814 + AT_rich Low_complexity Low_complexity 1 62 0 431 301 145 0 chr2 115286770 115286956 -137969627 - MIR SINE MIR -3 259 47 292 155 0 0 chr2 115287079 115287132 -137969451 - MIR SINE MIR -55 153 101 28 29 0 0 chr2 115287914 115287949 -137968634 + AT_rich Low_complexity Low_complexity 1 35 0 3238 214 42 10 chr2 115287951 115288674 -137967909 + L1ME2 LINE L1 5400 6145 -19 273 283 121 10 chr2 115289398 115289497 -137967086 + L2 LINE L2 3194 3303 -10 23 0 0 0 chr2 115290327 115290350 -137966233 + AT_rich Low_complexity Low_complexity 1 23 0 566 273 137 36 chr2 115290354 115291134 -137965449 + L1ME3 LINE L1 3083 3955 -2191 240 204 0 0 chr2 115291191 115291245 -137965338 + AluJ/monomer SINE Alu 246 299 -3 246 275 146 10 chr2 115291281 115291576 -137965007 + L1ME3 LINE L1 4106 4440 -1706 1568 142 7 33 chr2 115291746 115291773 -137964810 - L1MB3 LINE L1 -22 6161 6135 2166 120 13 0 chr2 115291773 115292072 -137964511 - AluSq SINE Alu -10 303 1 1568 142 7 33 chr2 115292072 115292318 -137964265 - L1MB3 LINE L1 -48 6135 5895 * 1583 261 95 32 chr2 115292291 115292939 -137963644 + L1ME3 LINE L1 4585 5191 -971 333 0 0 0 chr2 115292939 115292976 -137963607 + (CA)n Simple_repeat Simple_repeat 2 38 0 1583 261 95 32 chr2 115292976 115293314 -137963269 + L1ME3 LINE L1 5191 5506 -656 433 209 57 167 chr2 115293314 115293384 -137963199 - MER112 DNA MER1_type -1 255 179 1920 140 7 10 chr2 115293384 115293677 -137962906 - AluJb SINE Alu -20 292 1 433 209 57 167 chr2 115293677 115293888 -137962695 - MER112 DNA MER1_type -77 179 5 1583 261 95 32 chr2 115293888 115294186 -137962397 + L1ME3 LINE L1 5506 5951 -211 1036 183 91 10 chr2 115294205 115294413 -137962170 + MIR SINE MIR 20 244 -18 677 208 117 54 chr2 115295271 115295520 -137961063 + MLT1H LTR MaLR 282 549 0 338 296 78 56 chr2 115295579 115295849 -137960734 - L1ME4a LINE L1 -207 5914 5639 234 295 166 16 chr2 115295864 115296057 -137960526 + MER20B DNA MER1_type 1 222 -561 243 338 0 0 chr2 115296082 115296159 -137960424 + MLT1I LTR MaLR 23 99 -310 745 208 160 11 chr2 115296257 115296526 -137960057 + MER20B DNA MER1_type 475 783 0 327 182 34 122 chr2 115297583 115297686 -137958897 - L1MD3 LINE L1 -15 7980 7892 2164 108 20 7 chr2 115297686 115297982 -137958601 + AluSx SINE Alu 1 300 -12 327 182 34 122 chr2 115297982 115298026 -137958557 - L1MD3 LINE L1 -103 7892 7846 1071 164 23 0 chr2 115298843 115299014 -137957569 - MER45A DNA AcHobo -3 175 1 501 155 10 29 chr2 115299080 115299183 -137957400 - MER53 DNA DNA -88 101 1 254 174 10 61 chr2 115299389 115299487 -137957096 + GA-rich Low_complexity Low_complexity 5 97 0 813 75 9 0 chr2 115299574 115299681 -137956902 + AluSg/x SINE Alu 196 303 -6 339 329 40 101 chr2 115299910 115300187 -137956396 - L2 LINE L2 -17 3255 2996 596 276 39 20 chr2 115300287 115300471 -137956112 - MIR SINE MIR -38 224 34 2156 96 18 0 chr2 115300471 115300751 -137955832 - AluSx SINE Alu -27 285 1 596 276 39 20 chr2 115300751 115300769 -137955814 - MIR SINE MIR -228 34 18 284 149 40 81 chr2 115300756 115300830 -137955753 - L2 LINE L2 -1 3271 3201 * 384 248 29 73 chr2 115301209 115301346 -137955237 + MLT1G LTR MaLR 460 590 0 359 281 12 87 chr2 115301887 115302129 -137954454 + MER102a DNA MER1_type 107 330 0 272 222 32 0 chr2 115302363 115302426 -137954157 + MLT1L LTR MaLR 210 274 -341 233 222 32 0 chr2 115302587 115302650 -137953933 + MLT1L LTR MaLR 546 610 -5 1215 209 90 59 chr2 115303387 115303741 -137952842 + MLT1A1 LTR MaLR 1 365 0 2563 62 7 0 chr2 115304416 115304723 -137951860 - AluY SINE Alu -2 309 1 423 323 58 14 chr2 115305150 115305441 -137951142 - HAL1 LINE L1 -677 1830 1527 296 243 68 14 chr2 115305462 115305536 -137951047 + MER5A DNA MER1_type 14 91 -98 397 292 120 59 chr2 115305599 115306225 -137950358 - HAL1 LINE L1 -981 1526 863 667 278 56 28 chr2 115306235 115306391 -137950192 + L1MC4 LINE L1 7742 7911 -131 222 62 0 0 chr2 115306391 115306423 -137950160 + (CA)n Simple_repeat Simple_repeat 1 32 0 667 278 56 28 chr2 115306423 115306554 -137950029 + L1MC4 LINE L1 7911 8037 -5 2095 168 55 0 chr2 115308181 115308527 -137948056 - MLT1A1 LTR MaLR 0 365 1 2999 142 65 79 chr2 115308736 115309150 -137947433 + MER68 LTR ERV1 1 406 -156 360 111 0 0 chr2 115309150 115309204 -137947379 + (TG)n Simple_repeat Simple_repeat 1 54 0 2999 142 65 79 chr2 115309204 115309359 -137947224 + MER68 LTR ERV1 406 562 0 503 258 15 8 chr2 115310378 115310510 -137946073 - L1MD2 LINE L1 -55 6304 6172 * 2169 199 21 7 chr2 115310506 115311139 -137945444 - L1MC/D LINE L1 -743 5797 5250 * 5284 235 30 27 chr2 115311136 115311992 -137944591 - L1MC/D LINE L1 -1941 4599 3734 2243 128 0 0 chr2 115311992 115312296 -137944287 - AluSx SINE Alu -7 305 2 5284 235 30 27 chr2 115312296 115313044 -137943539 - L1MC/D LINE L1 -2806 3734 2990 513 227 0 0 chr2 115314051 115314183 -137942400 - L1MC/D LINE L1 -3526 3014 2883 621 199 46 0 chr2 115314243 115314374 -137942209 - L1MC/D LINE L1 -4214 2326 2190 1713 207 69 21 chr2 115314385 115314864 -137941719 - L1MC/D LINE L1 -4992 1551 1050 912 273 71 72 chr2 115315544 115316152 -137940431 - L1MC/D LINE L1 -5900 640 34 298 261 0 0 chr2 115316228 115316293 -137940290 + Tigger3(Golem) DNA MER2_type 78 142 -2887 * 1408 174 0 48 chr2 115316291 115316346 -137940237 + Tigger3(Golem) DNA MER2_type 2782 2838 -200 5389 104 4 32 chr2 115316346 115317147 -137939436 + L1MA4A LINE L1 5526 6303 0 1408 174 0 48 chr2 115317147 115317361 -137939222 + Tigger3(Golem) DNA MER2_type 2838 3038 0 351 0 0 0 chr2 115318220 115318259 -137938324 + (CA)n Simple_repeat Simple_repeat 2 40 0 417 188 55 109 chr2 115319609 115319737 -137936846 - MIR SINE MIR -29 233 113 2715 103 19 8 chr2 115319810 115320170 -137936413 + THE1B LTR MaLR 1 364 0 194 298 0 0 chr2 115321535 115321582 -137935001 - MIR SINE MIR -110 152 106 320 251 65 69 chr2 115321590 115321821 -137934762 + L2 LINE L2 2890 3119 -194 219 186 0 0 chr2 115323666 115323709 -137932874 + (TG)n Simple_repeat Simple_repeat 1 43 0 2070 92 31 7 chr2 115323756 115324050 -137932533 - AluSx SINE Alu -11 301 1 1841 174 39 3 chr2 115324050 115324407 -137932176 + MLT1B LTR MaLR 21 390 0 1990 100 47 0 chr2 115325612 115325891 -137930692 + AluSg SINE Alu 12 303 -7 482 341 72 23 chr2 115325954 115326382 -137930201 - L2 LINE L2 -191 3081 2636 225 291 42 36 chr2 115326608 115326773 -137929810 + L1M4 LINE L1 1536 1701 -4841 1084 288 98 23 chr2 115327451 115327823 -137928760 + L1M4 LINE L1 2608 2950 -3694 1936 141 173 16 chr2 115327823 115328193 -137928390 + MSTA LTR MaLR 1 428 0 1084 288 98 23 chr2 115328193 115328480 -137928103 + L1M4 LINE L1 2950 3317 -3327 888 261 22 9 chr2 115328572 115328798 -137927785 + MIR SINE MIR 30 258 -4 2206 289 63 42 chr2 115328810 115329078 -137927505 + L1M4 LINE L1 3346 3607 -3037 1535 176 68 20 chr2 115329078 115329374 -137927209 + AluJo SINE Alu 1 310 -2 2206 289 63 42 chr2 115329374 115330620 -137925963 + L1M4 LINE L1 3607 4891 -1753 231 36 0 0 chr2 115330987 115331015 -137925568 + (TC)n Simple_repeat Simple_repeat 1 28 0 563 31 0 0 chr2 115331625 115331690 -137924893 - L1PA4 LINE L1 -79 6076 6012 767 12 0 0 chr2 115331690 115331772 -137924811 + L1PA3 LINE L1 6069 6152 -3 198 0 0 0 chr2 115331778 115331800 -137924783 + (TAAAAA)n Simple_repeat Simple_repeat 3 24 0 184 201 132 101 chr2 115331995 115332154 -137924429 + MIR SINE MIR 91 254 -8 225 0 0 0 chr2 115333095 115333120 -137923463 + (T)n Simple_repeat Simple_repeat 1 25 0 186 188 146 0 chr2 115334321 115334369 -137922214 - MIR SINE MIR -73 135 81 184 338 56 0 chr2 115335106 115335177 -137921406 - MIR SINE MIR -79 129 55 467 231 62 120 chr2 115335254 115335315 -137921268 + MIR SINE MIR 5 68 -194 6833 183 22 1 chr2 115335315 115337475 -137919108 + L1PA15 LINE L1 4026 6164 -1 1746 129 82 20 chr2 115337481 115337775 -137918808 + AluSx SINE Alu 1 312 0 467 231 62 120 chr2 115337775 115337948 -137918635 + MIR SINE MIR 73 232 -30 854 171 17 11 chr2 115338475 115338841 -137917742 + CT-rich Low_complexity Low_complexity 1 368 0 255 229 0 0 chr2 115338845 115338906 -137917677 + T-rich Low_complexity Low_complexity 1 61 0 1729 137 42 21 chr2 115338933 115339218 -137917365 - AluSx SINE Alu -21 291 1 293 214 0 0 chr2 115339221 115339277 -137917306 + MIR SINE MIR 120 175 -87 1503 232 32 5 chr2 115339278 115340237 -137916346 - L1MEc LINE L1 -3683 2532 1481 803 179 39 34 chr2 115340237 115340416 -137916167 + LTR9 LTR ERV1 1 180 -432 432 213 9 19 chr2 115340424 115340532 -137916051 - L1MEc LINE L1 -6246 150 44 751 242 43 59 chr2 115341572 115341828 -137914755 - MER112 DNA MER1_type -8 252 1 1646 85 45 18 chr2 115341921 115342144 -137914439 + MER30 DNA MER1_type 2 230 0 343 248 88 7 chr2 115342430 115342567 -137914016 + L1ME4a LINE L1 5973 6120 -1 447 52 0 0 chr2 115343086 115343144 -137913439 + (TTCA)n Simple_repeat Simple_repeat 1 58 0 182 250 62 0 chr2 115343247 115343295 -137913288 - L2 LINE L2 -72 3200 3150 * 227 143 11 33 chr2 115343275 115343327 -137913256 + MIR SINE MIR 101 162 -46 345 299 109 7 chr2 115343888 115344025 -137912558 - MIR SINE MIR -29 233 83 361 227 11 23 chr2 115344353 115344441 -137912142 + MER21B LTR ERV1 1 87 -776 2258 214 71 98 chr2 115344462 115344749 -137911834 + MER21B LTR ERV1 18 311 -552 1699 104 5 0 chr2 115344749 115344970 -137911613 + AluSg/x SINE Alu 76 297 -15 2258 214 71 98 chr2 115344970 115345259 -137911324 + MER21B LTR ERV1 311 606 -257 1779 151 25 4 chr2 115345259 115345537 -137911046 + AluJo SINE Alu 1 284 -28 2258 214 71 98 chr2 115345537 115345686 -137910897 + MER21B LTR ERV1 606 722 -141 2077 140 20 60 chr2 115345686 115346037 -137910546 + MER1B DNA MER1_type 1 337 0 2258 214 71 98 chr2 115346037 115346123 -137910460 + MER21B LTR ERV1 722 809 -54 830 282 59 21 chr2 115348386 115348812 -137907771 + L1MC3 LINE L1 1989 2430 -3966 2644 233 59 20 chr2 115349421 115350115 -137906468 - L1ME2 LINE L1 -27 6137 5417 221 143 57 100 chr2 115350115 115350185 -137906398 + MIR SINE MIR 135 201 -61 * 312 307 22 66 chr2 115350130 115350267 -137906316 - MIR SINE MIR -57 151 21 2000 146 59 36 chr2 115350858 115351214 -137905369 - THE1B LTR MaLR 0 364 1 11804 102 22 8 chr2 115351214 115352772 -137903811 - THE1B-int LTR MaLR 0 1580 1 2316 122 36 31 chr2 115352774 115353134 -137903449 - THE1B LTR MaLR -2 362 1 310 269 19 29 chr2 115353413 115353517 -137903066 - L2 LINE L2 0 3313 3211 * 339 284 10 20 chr2 115353511 115353613 -137902970 + MIR SINE MIR 159 259 -3 2151 144 123 26 chr2 115354471 115354861 -137901722 + MSTA LTR MaLR 1 428 0 793 329 24 0 chr2 115355135 115355384 -137901199 - MIR SINE MIR 0 262 8 332 262 48 0 chr2 115355385 115355469 -137901114 - MIR SINE MIR -20 242 155 15460 120 33 19 chr2 115355476 115357837 -137898746 + Tigger1 DNA MER2_type 24 2418 0 2171 125 0 7 chr2 115357856 115358160 -137898423 - AluSq SINE Alu -11 302 1 246 246 88 29 chr2 115358176 115358284 -137898299 - MIR SINE MIR -75 133 24 1377 232 166 77 chr2 115359569 115360119 -137896464 + L1MC3 LINE L1 2516 3016 -3199 2251 96 0 3 chr2 115360119 115360411 -137896172 + AluY SINE Alu 1 291 -20 1377 232 166 77 chr2 115360411 115360807 -137895776 + L1MC3 LINE L1 3016 3546 -2669 1173 221 58 0 chr2 115360879 115361204 -137895379 + L1MC3 LINE L1 4465 4808 -1407 2925 226 28 55 chr2 115361235 115362245 -137894338 + L1MC3 LINE L1 5221 5472 -743 18892 85 6 2 chr2 115362245 115365510 -137891073 - L1PA7 LINE L1 -3 6151 2881 2662 242 108 65 chr2 115365510 115366084 -137890499 + L1ME2 LINE L1 3208 3756 -2390 2171 113 3 13 chr2 115366084 115366384 -137890199 + AluSx SINE Alu 1 297 -15 2662 242 108 65 chr2 115366384 115366409 -137890174 + L1ME2 LINE L1 3756 3778 -2368 417 39 0 0 chr2 115366409 115366460 -137890123 + (CA)n Simple_repeat Simple_repeat 2 52 0 2662 242 108 65 chr2 115366460 115366690 -137889893 + L1ME2 LINE L1 3778 3997 -2149 1798 62 0 103 chr2 115366690 115366980 -137889603 + L1MA1 LINE L1 6043 6302 0 2662 242 108 65 chr2 115366980 115367609 -137888974 + L1ME2 LINE L1 3997 4734 -1412 8115 197 57 14 chr2 115367634 115367810 -137888773 - L1MB7 LINE L1 -10 6174 6007 2113 169 101 5 chr2 115367810 115368195 -137888388 + MSTB LTR MaLR 1 422 -4 8115 197 57 14 chr2 115368195 115370755 -137885828 - L1MB7 LINE L1 -177 6007 3316 3143 220 60 23 chr2 115370795 115371844 -137884739 + L1ME2 LINE L1 5076 6332 -2 246 252 193 25 chr2 115372233 115372352 -137884231 + MIR SINE MIR 20 158 -104 1386 199 67 73 chr2 115374412 115374784 -137881799 + MLT1A2 LTR MaLR 1 370 -4 220 290 65 47 chr2 115374940 115375047 -137881536 - L2 LINE L2 -24 3248 3140 232 186 0 17 chr2 115375164 115375223 -137881360 + T-rich Low_complexity Low_complexity 2 59 0 2326 90 3 3 chr2 115375254 115375555 -137881028 - AluSx SINE Alu -11 301 1 380 247 132 37 chr2 115375974 115376164 -137880419 + MER102a DNA MER1_type 95 302 -28 185 329 48 27 chr2 115376442 115376588 -137879995 + L2 LINE L2 2911 3059 -213 2721 183 31 8 chr2 115376755 115377268 -137879315 + MER74A LTR ERVL 34 558 0 1963 162 3 0 chr2 115379309 115379617 -137876966 - AluSx SINE Alu -3 309 1 2039 127 6 38 chr2 115379741 115380056 -137876527 - AluSx SINE Alu -1 311 7 357 93 0 0 chr2 115380107 115380161 -137876422 + (TG)n Simple_repeat Simple_repeat 1 54 0 477 276 20 20 chr2 115381190 115381342 -137875241 + MIR SINE MIR 2 153 -109 447 19 0 0 chr2 115381673 115381725 -137874858 + (TG)n Simple_repeat Simple_repeat 2 53 0 9639 220 72 22 chr2 115382668 115384114 -137872469 - L1MDa LINE L1 -1607 4933 3560 1268 161 203 75 chr2 115384114 115384463 -137872120 + MSTD LTR MaLR 1 394 -2 9639 220 72 22 chr2 115384463 115387675 -137868908 - L1MDa LINE L1 -2980 3560 26 553 311 56 30 chr2 115388162 115388557 -137868026 - L1ME LINE L1 -452 5669 5265 847 165 129 46 chr2 115390095 115390289 -137866294 + L1MB7 LINE L1 68 277 -6582 533 265 34 5 chr2 115390282 115390486 -137866097 + L1MB7 LINE L1 2963 3172 -3785 * 4842 199 58 18 chr2 115390554 115392479 -137864104 + L1MB7 LINE L1 4988 6995 0 1811 168 0 17 chr2 115394041 115394338 -137862245 + AluJo SINE Alu 7 298 -14 2092 130 10 7 chr2 115395116 115395423 -137861160 + AluSx SINE Alu 1 308 -4 5813 132 46 18 chr2 115395711 115397056 -137859527 - Ricksha DNA DNA -58 3196 1710 604 182 25 25 chr2 115397045 115397166 -137859417 - Ricksha DNA DNA -1126 128 8 * 280 287 0 11 chr2 115397195 115397282 -137859301 - L1ME3A LINE L1 -240 5930 5845 1133 246 29 3 chr2 115397298 115397783 -137858800 + MER34 LTR ERV1 11 542 0 334 338 68 30 chr2 115397802 115398036 -137858547 - L1ME3A LINE L1 -1985 5823 5581 208 359 43 0 chr2 115398135 115398227 -137858356 - L2 LINE L2 -420 2894 2799 287 272 68 10 chr2 115398239 115398342 -137858241 + MER94 DNA DNA 17 125 -9 2099 149 7 0 chr2 115398385 115398687 -137857896 + AluSx SINE Alu 1 304 -8 3128 222 35 36 chr2 115399261 115400560 -137856023 + L1ME1 LINE L1 4864 6161 -5 336 159 11 23 chr2 115400808 115400896 -137855687 + (TA)n Simple_repeat Simple_repeat 2 88 0 226 184 0 20 chr2 115400899 115400948 -137855635 + L1 LINE L1 4900 4947 -1199 840 223 0 0 chr2 115401212 115401360 -137855223 - AluJb SINE Alu -28 284 137 410 283 169 42 chr2 115401369 115401677 -137854906 + L1MC4a LINE L1 5562 5908 -1900 2316 95 3 19 chr2 115401849 115402164 -137854419 - AluSx SINE Alu -2 310 1 552 288 89 69 chr2 115402567 115402939 -137853644 - L1MEd LINE L1 -4733 1577 1214 2271 92 7 10 chr2 115402939 115403244 -137853339 - AluSg1 SINE Alu 0 309 6 552 288 89 69 chr2 115403244 115403256 -137853327 - L1MEd LINE L1 -5096 1214 1204 2102 134 0 7 chr2 115403256 115403546 -137853037 - AluSx SINE Alu -24 288 1 552 288 89 69 chr2 115403546 115403839 -137852744 - L1MEd LINE L1 -5106 1204 865 554 250 11 45 chr2 115405089 115405265 -137851318 + L2 LINE L2 3143 3312 -1 261 250 23 45 chr2 115406241 115406329 -137850254 - MIR SINE MIR -62 146 61 280 247 0 45 chr2 115407132 115407221 -137849362 - MER5A DNA MER1_type -35 154 70 194 311 22 11 chr2 115408484 115408574 -137848009 + MIR SINE MIR 138 228 -34 500 275 57 69 chr2 115409651 115409973 -137846610 + MLT1H1 LTR MaLR 2 364 -231 307 239 49 2 chr2 115410001 115410102 -137846481 + MLT1G1 LTR MaLR 486 595 0 266 274 29 39 chr2 115411498 115411600 -137844983 - MER5A DNA MER1_type -9 180 80 229 264 110 0 chr2 115411757 115411848 -137844735 + MER3 DNA MER1_type 1 101 -108 189 211 19 19 chr2 115412281 115412333 -137844250 + MIR SINE MIR 8 59 -203 492 293 50 6 chr2 115412848 115413029 -137843554 + MIR SINE MIR 68 256 -6 1900 163 0 7 chr2 115413137 115413437 -137843146 + AluJb SINE Alu 1 298 -14 2254 107 0 0 chr2 115413967 115414257 -137842326 + AluSg SINE Alu 1 290 -20 287 301 0 0 chr2 115415218 115415301 -137841282 + (TGAG)n Simple_repeat Simple_repeat 3 85 0 24 53 0 0 chr2 115416419 115416457 -137840126 + AT_rich Low_complexity Low_complexity 1 38 0 289 290 20 30 chr2 115418376 115418476 -137838107 + MIR SINE MIR 33 131 -77 1028 254 110 33 chr2 115418488 115418941 -137837642 - L1ME4a LINE L1 0 6121 5634 250 304 69 39 chr2 115418997 115419201 -137837382 - MER102a DNA MER1_type -6 324 115 643 169 0 108 chr2 115419545 115419693 -137836890 - FLAM_C SINE Alu 0 133 2 883 111 0 111 chr2 115420892 115421045 -137835538 - AluSg/x SINE Alu -28 282 147 2211 111 0 26 chr2 115421609 115421915 -137834668 + AluSx SINE Alu 1 298 -14 1895 153 0 22 chr2 115424004 115424282 -137832301 + AluJb SINE Alu 3 275 -37 231 36 0 0 chr2 115424282 115424310 -137832273 + (CAAT)n Simple_repeat Simple_repeat 4 31 0 1895 153 0 22 chr2 115424310 115424345 -137832238 + AluJb SINE Alu 275 309 -3 21 0 0 0 chr2 115424473 115424494 -137832089 + AT_rich Low_complexity Low_complexity 1 21 0 862 267 111 39 chr2 115424601 115425035 -137831548 + MLT1L LTR MaLR 150 614 -1 3355 160 55 2 chr2 115425208 115425772 -137830811 - MER44D DNA MER2_type 0 605 140 263 231 0 0 chr2 115425775 115425827 -137830756 + LTR30 LTR ERV1 1 52 -670 902 144 11 193 chr2 115425827 115426112 -137830471 + LTR12 LTR ERV1 53 285 -429 336 216 31 21 chr2 115426112 115426209 -137830374 + LTR30 LTR ERV1 552 649 -73 698 104 0 0 chr2 115426209 115426305 -137830278 + LTR12 LTR ERV1 619 714 0 730 213 29 0 chr2 115426305 115426441 -137830142 - MER44D DNA MER2_type -565 140 1 342 287 65 0 chr2 115426629 115426737 -137829846 + MIR SINE MIR 78 192 -70 258 179 0 0 chr2 115427876 115427932 -137828651 + (CA)n Simple_repeat Simple_repeat 1 56 0 189 225 0 0 chr2 115428036 115428076 -137828507 + L2 LINE L2 3233 3272 0 21 0 0 0 chr2 115428093 115428114 -137828469 + AT_rich Low_complexity Low_complexity 1 21 0 800 194 75 15 chr2 115428674 115428875 -137827708 - MER20 DNA MER1_type -4 215 3 265 184 92 26 chr2 115430609 115430685 -137825898 + MIR SINE MIR 107 187 -75 499 136 11 0 chr2 115430703 115430791 -137825792 + MER5A DNA MER1_type 26 114 -75 4776 153 29 27 chr2 115432923 115433813 -137822770 - L1MD1 LINE L1 0 6242 5351 877 66 0 59 chr2 115633816 115634110 -137622473 + (GCTG)n Simple_repeat Simple_repeat 1 276 0 807 65 0 68 chr2 115634121 115634656 -137621927 + (GCTG)n Simple_repeat Simple_repeat 2 674 0 849 48 11 58 chr2 115634677 115634865 -137621718 + (GCTG)n Simple_repeat Simple_repeat 2 180 0 520 84 0 74 chr2 115634896 115635086 -137621497 + (GCTG)n Simple_repeat Simple_repeat 2 177 0 692 45 0 104 chr2 115635136 115635337 -137621246 + (GCTG)n Simple_repeat Simple_repeat 1 180 0 868 64 1 71 chr2 115635348 115636243 -137620340 + (GCTG)n Simple_repeat Simple_repeat 1 1010 0 806 47 0 68 chr2 115636243 115636435 -137620148 + (GCTG)n Simple_repeat Simple_repeat 2 180 0 840 50 0 76 chr2 115636612 115637341 -137619242 + (GCTG)n Simple_repeat Simple_repeat 2 851 0 266 254 164 0 chr2 115637636 115637746 -137618837 + MLT1A2 LTR MaLR 31 158 -216 355 156 0 58 chr2 115637922 115638102 -137618481 + (GCTG)n Simple_repeat Simple_repeat 1 169 0 1088 157 0 11 chr2 115638109 115638287 -137618296 - AluSg/x SINE Alu -53 259 84 1438 140 0 9 chr2 115638288 115638517 -137618066 - AluSg/x SINE Alu -4 306 80 280 157 0 0 chr2 115638517 115638568 -137618015 - Alu SINE Alu -3 297 247 1339 157 0 9 chr2 115638568 115638785 -137617798 - AluSg/x SINE Alu -16 294 80 350 91 0 0 chr2 115638785 115638840 -137617743 - Alu SINE Alu -2 299 245 1501 118 0 9 chr2 115638840 115639051 -137617532 - AluSg/x SINE Alu -22 288 80 332 94 0 0 chr2 115639058 115639111 -137617472 - Alu SINE Alu -3 297 245 1487 134 0 9 chr2 115639111 115639327 -137617256 - AluSg/x SINE Alu -17 293 80 401 83 0 0 chr2 115639327 115639387 -137617196 - Alu SINE Alu -7 303 244 1416 144 0 14 chr2 115639387 115639602 -137616981 - AluSg/x SINE Alu -19 291 80 418 60 0 0 chr2 115639603 115639670 -137616913 - Alu SINE Alu 0 310 244 1292 167 0 9 chr2 115639670 115639880 -137616703 - AluSg/x SINE Alu -19 291 84 1362 138 0 9 chr2 115639880 115640121 -137616462 - AluSg/x SINE Alu 0 310 80 1362 159 4 9 chr2 115640120 115640346 -137616237 - AluSg/x SINE Alu -4 308 84 236 148 0 0 chr2 115640353 115640407 -137616176 - Alu SINE Alu 0 301 248 1308 138 44 10 chr2 115640407 115640610 -137615973 - AluSg/x SINE Alu -20 290 81 1498 139 0 9 chr2 115640610 115640840 -137615743 - AluSg/x SINE Alu -3 307 80 1412 139 5 14 chr2 115640840 115641055 -137615528 - AluSg/x SINE Alu -16 296 84 1644 91 0 14 chr2 115641056 115641275 -137615308 - AluSg/x SINE Alu -15 297 82 332 93 0 0 chr2 115641279 115641333 -137615250 - Alu SINE Alu 0 301 248 1744 180 0 3 chr2 115641333 115641628 -137614955 - AluSg SINE Alu -16 294 1 349 60 0 0 chr2 115641634 115641684 -137614899 - AluSq/x SINE Alu -169 133 84 404 79 0 0 chr2 115641685 115641748 -137614835 - Alu SINE Alu -4 305 243 1453 126 0 9 chr2 115641748 115641962 -137614621 - AluSg/x SINE Alu -19 293 82 1445 140 0 9 chr2 115641963 115642184 -137614399 - AluSg/x SINE Alu -12 298 80 1422 148 0 5 chr2 115642183 115642400 -137614183 - AluSg/x SINE Alu -11 299 84 * 747 69 0 64 chr2 115642435 115642623 -137613960 + (GCTG)n Simple_repeat Simple_repeat 4 179 0 623 105 0 62 chr2 115642684 115643127 -137613456 + (GCTG)n Simple_repeat Simple_repeat 1 415 0 566 90 0 60 chr2 115643611 115643778 -137612805 + (GCTG)n Simple_repeat Simple_repeat 2 158 0 875 88 0 59 chr2 115643796 115644277 -137612306 + (GCTG)n Simple_repeat Simple_repeat 1 452 0 316 83 0 73 chr2 115644291 115644400 -137612183 + (GCTG)n Simple_repeat Simple_repeat 3 103 0 700 62 0 72 chr2 115644412 115644606 -137611977 + (GCTG)n Simple_repeat Simple_repeat 1 180 0 957 45 0 58 chr2 115644623 115645010 -137611573 + (GCTG)n Simple_repeat Simple_repeat 1 364 0 663 98 0 69 chr2 115645022 115645408 -137611175 + (GCTG)n Simple_repeat Simple_repeat 1 359 0 862 67 0 65 chr2 115645434 115646274 -137610309 + (GCTG)n Simple_repeat Simple_repeat 2 960 0 252 0 0 0 chr2 115652524 115652552 -137604031 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 2464 76 0 3 chr2 115653194 115653497 -137603086 - AluSx SINE Alu -10 302 1 278 229 57 0 chr2 115656491 115656561 -137600022 - MER2 DNA MER2_type -8 337 264 1173 178 0 0 chr2 115656590 115656787 -137599796 - MER2 DNA MER2_type -147 198 2 275 339 25 8 chr2 115657034 115657152 -137599431 + L2 LINE L2 3138 3257 -15 2394 100 0 0 chr2 115658878 115659177 -137597406 - AluSg SINE Alu -11 299 1 215 224 0 20 chr2 115659286 115659335 -137597248 + GA-rich Low_complexity Low_complexity 6 53 0 2080 132 0 33 chr2 115659586 115659890 -137596693 + AluSx SINE Alu 1 294 -18 1527 151 7 18 chr2 115662416 115662700 -137593883 - L1MB3 LINE L1 -1 6182 5902 207 0 0 0 chr2 115665574 115665597 -137590986 + (T)n Simple_repeat Simple_repeat 1 23 0 36 23 0 0 chr2 115667239 115667282 -137589301 + AT_rich Low_complexity Low_complexity 1 43 0 2678 139 68 21 chr2 115668521 115669053 -137587530 - L1MA8 LINE L1 -3 6288 5732 2392 86 0 13 chr2 115669176 115669491 -137587092 + AluY SINE Alu 1 311 0 449 304 62 18 chr2 115670209 115670436 -137586147 + MLT1K LTR MaLR 340 576 -12 2655 52 0 0 chr2 115670436 115670744 -137585839 - AluY SINE Alu -3 308 1 199 195 73 0 chr2 115671981 115672022 -137584561 - MIR3 SINE MIR -37 171 128 2048 138 30 53 chr2 115672470 115672689 -137583894 - MLT1B LTR MaLR -2 388 180 725 54 0 0 chr2 115672689 115672782 -137583801 - L1PA5 LINE L1 0 6154 6062 2048 138 30 53 chr2 115672782 115672959 -137583624 - MLT1B LTR MaLR -210 180 1 2379 100 0 3 chr2 115673745 115674046 -137582537 + AluSx SINE Alu 1 300 -12 430 223 134 18 chr2 115674271 115674383 -137582200 + MIR SINE MIR 7 131 -131 224 301 301 0 chr2 115674537 115674640 -137581943 + L2 LINE L2 3138 3271 -1 1541 146 15 131 chr2 115675872 115676208 -137580375 - AluJo SINE Alu -4 298 2 239 227 93 40 chr2 115677942 115678017 -137578566 - MIR SINE MIR -93 169 91 1629 180 73 32 chr2 115680060 115680335 -137576248 - MLT2D LTR ERVL 0 464 184 2610 74 0 0 chr2 115680335 115680645 -137575938 - AluY SINE Alu -1 310 1 1629 180 73 32 chr2 115680645 115680837 -137575746 - MLT2D LTR ERVL -280 184 1 2436 95 3 0 chr2 115681132 115681436 -137575147 + AluSx SINE Alu 1 305 -7 292 41 61 0 chr2 115681468 115681517 -137575066 + A-rich Low_complexity Low_complexity 5 56 0 348 24 0 0 chr2 115681554 115681595 -137574988 + (TG)n Simple_repeat Simple_repeat 2 42 0 981 189 6 17 chr2 115681596 115681807 -137574776 - AluSg/x SINE Alu 0 321 113 402 303 118 26 chr2 115681847 115682075 -137574508 + L3 LINE CR1 949 1197 -380 542 284 32 13 chr2 115682454 115682609 -137573974 - MIR SINE MIR -72 190 33 2439 97 0 3 chr2 115682801 115683111 -137573472 + AluSx SINE Alu 1 309 -3 366 23 0 0 chr2 115683111 115683154 -137573429 + (TA)n Simple_repeat Simple_repeat 2 44 0 1714 162 43 40 chr2 115683805 115684108 -137572475 - AluJo SINE Alu -8 304 1 1956 167 50 19 chr2 115684146 115684524 -137572059 + MLT1B LTR MaLR 1 390 0 1952 152 62 8 chr2 115686102 115686471 -137570112 + L1MB5 LINE L1 5773 6161 -13 1891 163 3 3 chr2 115686479 115686779 -137569804 - AluJo SINE Alu -8 304 5 370 261 28 49 chr2 115687288 115687430 -137569153 + MLT1J LTR MaLR 4 142 -369 264 285 67 47 chr2 115687426 115687619 -137568964 + MLT1J LTR MaLR 315 511 0 * 242 243 45 65 chr2 115688290 115688360 -137568223 - L1ME4a LINE L1 -1 6120 6050 2368 91 10 0 chr2 115688360 115688656 -137567927 - AluSg SINE Alu -11 299 1 242 243 45 65 chr2 115688656 115688827 -137567756 - L1ME4a LINE L1 -71 6050 5838 392 212 50 20 chr2 115689478 115689577 -137567006 + L2 LINE L2 3210 3311 -2 1084 126 7 0 chr2 115689911 115690062 -137566521 - AluSg/x SINE Alu 0 312 161 1183 58 7 0 chr2 115690298 115690435 -137566148 - AluSq/x SINE Alu -172 140 3 309 186 0 0 chr2 115690869 115690939 -137565644 + (CAT)n Simple_repeat Simple_repeat 2 71 0 529 300 170 0 chr2 115690953 115691153 -137565430 - MIR SINE MIR -16 246 13 184 329 105 0 chr2 115691286 115691362 -137565221 + L2 LINE L2 3184 3267 -5 329 238 25 0 chr2 115691823 115691903 -137564680 - MLT1F LTR MaLR -47 495 414 275 220 28 128 chr2 115692085 115692194 -137564389 + MLT1J LTR MaLR 223 320 -191 1338 218 122 64 chr2 115692358 115692826 -137563757 + MLT1F LTR MaLR 1 495 -47 284 228 53 0 chr2 115692959 115693016 -137563567 + L2 LINE L2 3213 3272 0 2387 90 7 7 chr2 115693120 115693430 -137563153 + AluY SINE Alu 1 310 -1 985 80 0 57 chr2 115695658 115696266 -137560317 + (GCTG)n Simple_repeat Simple_repeat 1 573 0 752 78 0 72 chr2 115696299 115696659 -137559924 + (GCTG)n Simple_repeat Simple_repeat 1 334 0 662 89 0 72 chr2 115696685 115697170 -137559413 + (GCTG)n Simple_repeat Simple_repeat 1 450 0 721 95 0 68 chr2 115697192 115697810 -137558773 + (GCTG)n Simple_repeat Simple_repeat 1 575 0 618 58 0 85 chr2 115697823 115698011 -137558572 + (GCTG)n Simple_repeat Simple_repeat 3 174 0 447 103 0 77 chr2 115698030 115698224 -137558359 + (GCTG)n Simple_repeat Simple_repeat 2 180 0 830 74 0 73 chr2 115698292 115699430 -137557153 + (GCTG)n Simple_repeat Simple_repeat 1 1054 0 809 73 0 70 chr2 115699498 115699881 -137556702 + (GCTG)n Simple_repeat Simple_repeat 1 356 0 644 80 0 69 chr2 115699929 115700117 -137556466 + (GCTG)n Simple_repeat Simple_repeat 4 178 0 684 64 0 76 chr2 115700184 115700532 -137556051 + (GCTG)n Simple_repeat Simple_repeat 1 321 0 492 98 0 77 chr2 115700585 115700779 -137555804 + (GCTG)n Simple_repeat Simple_repeat 2 180 0 787 65 0 59 chr2 115700819 115701005 -137555578 + (GCTG)n Simple_repeat Simple_repeat 4 178 0 656 82 0 71 chr2 115701037 115701221 -137555362 + (GCTG)n Simple_repeat Simple_repeat 4 174 0 776 69 4 65 chr2 115701264 115701542 -137555041 + (GCTG)n Simple_repeat Simple_repeat 1 260 0 772 47 0 73 chr2 115701554 115701745 -137554838 + (GCTG)n Simple_repeat Simple_repeat 2 178 0 755 68 3 68 chr2 115701773 115702098 -137554485 + (GCTG)n Simple_repeat Simple_repeat 1 303 0 727 100 0 66 chr2 115702200 115703477 -137553106 + (GCTG)n Simple_repeat Simple_repeat 1 1192 0 793 47 0 73 chr2 115703488 115703680 -137552903 + (GCTG)n Simple_repeat Simple_repeat 3 180 0 650 98 0 73 chr2 115703692 115704139 -137552444 + (GCTG)n Simple_repeat Simple_repeat 1 414 0 676 80 0 75 chr2 115704154 115704840 -137551743 + (GCTG)n Simple_repeat Simple_repeat 1 634 0 720 57 0 77 chr2 115704857 115705051 -137551532 + (GCTG)n Simple_repeat Simple_repeat 1 179 0 598 78 0 73 chr2 115705063 115705254 -137551329 + (GCTG)n Simple_repeat Simple_repeat 2 178 0 407 109 0 55 chr2 115705290 115705418 -137551165 + (GCTG)n Simple_repeat Simple_repeat 2 122 0 830 38 0 70 chr2 115705438 115705624 -137550959 + (GCTG)n Simple_repeat Simple_repeat 4 176 0 774 75 3 72 chr2 115705656 115706361 -137550222 + (GCTG)n Simple_repeat Simple_repeat 1 656 0 209 230 58 14 chr2 115706600 115706739 -137549844 + (TA)n Simple_repeat Simple_repeat 2 146 0 316 203 43 14 chr2 115706821 115706959 -137549624 + (TA)n Simple_repeat Simple_repeat 2 143 0 24 0 0 0 chr2 115707018 115707042 -137549541 + AT_rich Low_complexity Low_complexity 1 24 0 1954 130 3 3 chr2 115707466 115707751 -137548832 + AluSq SINE Alu 24 308 -5 235 245 33 20 chr2 115708238 115708389 -137548194 + (TA)n Simple_repeat Simple_repeat 1 153 0 262 110 92 28 chr2 115708461 115708570 -137548013 + (TA)n Simple_repeat Simple_repeat 1 116 0 345 227 55 53 chr2 115708570 115708745 -137547838 - L1MC4 LINE L1 -1339 6983 1912 311 214 22 56 chr2 115708891 115708980 -137547603 - L1MC4 LINE L1 -1339 6703 6618 321 247 31 12 chr2 115709176 115709338 -137547245 + (TA)n Simple_repeat Simple_repeat 2 166 0 26 0 0 0 chr2 115709412 115709438 -137547145 + AT_rich Low_complexity Low_complexity 1 26 0 2250 102 0 0 chr2 115709454 115709737 -137546846 + AluSx SINE Alu 12 294 -18 225 276 8 24 chr2 115709818 115709945 -137546638 + (TATAA)n Simple_repeat Simple_repeat 5 129 0 239 284 6 25 chr2 115710048 115710210 -137546373 + (TATAA)n Simple_repeat Simple_repeat 1 159 0 35 41 0 0 chr2 115710219 115710268 -137546315 + AT_rich Low_complexity Low_complexity 1 49 0 261 259 40 11 chr2 115710273 115710447 -137546136 + (TA)n Simple_repeat Simple_repeat 2 180 0 33 94 0 0 chr2 115710453 115710549 -137546034 + AT_rich Low_complexity Low_complexity 1 96 0 27 0 0 0 chr2 115711186 115711213 -137545370 + AT_rich Low_complexity Low_complexity 1 27 0 22 56 0 0 chr2 115711437 115711473 -137545110 + AT_rich Low_complexity Low_complexity 1 36 0 183 188 0 0 chr2 115711576 115711624 -137544959 + (CA)n Simple_repeat Simple_repeat 2 49 0 283 275 31 6 chr2 115711652 115711812 -137544771 + (TA)n Simple_repeat Simple_repeat 2 165 0 235 237 14 36 chr2 115711878 115712017 -137544566 + (TA)n Simple_repeat Simple_repeat 1 136 0 23 0 0 0 chr2 115712017 115712040 -137544543 + AT_rich Low_complexity Low_complexity 1 23 0 388 275 7 0 chr2 115712359 115712497 -137544086 + (CA)n Simple_repeat Simple_repeat 2 140 0 416 288 0 6 chr2 115712638 115712801 -137543782 + (CA)n Simple_repeat Simple_repeat 2 163 0 2295 98 0 3 chr2 115712804 115713099 -137543484 + AluSx SINE Alu 1 294 -18 1190 137 0 0 chr2 115713099 115713267 -137543316 + AluSg/x SINE Alu 132 299 -11 304 326 6 6 chr2 115713279 115713451 -137543132 + (CA)n Simple_repeat Simple_repeat 1 172 0 260 188 0 12 chr2 115713467 115713552 -137543031 + (CA)n Simple_repeat Simple_repeat 1 84 0 266 0 0 29 chr2 115714605 115714640 -137541943 + (TTA)n Simple_repeat Simple_repeat 3 36 0 542 186 0 0 chr2 115714640 115714742 -137541841 - L1PA16 LINE L1 -25 6141 6040 2444 99 0 0 chr2 115714875 115715178 -137541405 + AluSx SINE Alu 1 303 -9 1383 184 0 11 chr2 115715287 115715565 -137541018 - L1PA16 LINE L1 -133 6033 5759 839 150 12 12 chr2 115715559 115715719 -137540864 - L1PA16 LINE L1 -245 5921 5762 * 881 170 0 6 chr2 115715719 115715878 -137540705 - L1PA16 LINE L1 -247 5919 5762 846 160 6 6 chr2 115715879 115716035 -137540548 - L1PA16 LINE L1 -248 5918 5763 1590 149 0 67 chr2 115716038 115716275 -137540308 - L1PA16 LINE L1 -249 5917 5707 2163 101 7 0 chr2 115716275 115716552 -137540031 + AluSx SINE Alu 23 301 -11 1590 149 0 67 chr2 115716552 115716643 -137539940 - L1PA16 LINE L1 -459 5707 5611 1704 163 7 92 chr2 115716648 115716920 -137539663 - L1PA16 LINE L1 -22 6144 5917 3184 107 2 2 chr2 115716920 115717367 -137539216 + L1PA7 LINE L1 5708 6154 0 1704 163 7 92 chr2 115717367 115717505 -137539078 - L1PA16 LINE L1 -249 5917 5769 297 188 0 0 chr2 115717505 115717545 -137539038 + L1PA12 LINE L1 5999 6041 -127 2034 167 0 0 chr2 115717545 115717857 -137538726 + AluSx SINE Alu 1 312 0 297 188 0 0 chr2 115717857 115717880 -137538703 + L1PA12 LINE L1 6040 6062 -106 216 0 0 0 chr2 115717894 115717918 -137538665 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2123 100 22 59 chr2 115718340 115718482 -137538101 + AluSg SINE Alu 1 147 -163 2341 93 0 22 chr2 115718482 115718793 -137537790 + AluY SINE Alu 1 304 -7 2123 100 22 59 chr2 115718793 115718971 -137537612 + AluSg SINE Alu 147 309 -1 660 192 0 0 chr2 115719055 115719159 -137537424 + FLAM_C SINE Alu 2 105 -38 2935 266 35 1 chr2 115719160 115719968 -137536615 - ERVL LTR ERVL -3750 2014 1180 361 152 19 0 chr2 115719977 115720082 -137536501 + (CCAA)n Simple_repeat Simple_repeat 1 107 0 837 244 0 0 chr2 115720084 115720271 -137536312 - ERVL LTR ERVL -4575 1189 1002 276 30 0 0 chr2 115720271 115720304 -137536279 + (TG)n Simple_repeat Simple_repeat 2 34 0 4916 175 22 29 chr2 115720316 115721244 -137535339 - MER49 LTR ERV1 -2 921 1 274 293 30 0 chr2 115721256 115721355 -137535228 - MLT2C1 LTR ERVL -59 338 237 352 265 29 0 chr2 115721389 115721491 -137535092 - MLT2C1 LTR ERVL -291 106 2 252 358 114 0 chr2 115721807 115721930 -137534653 - MIR SINE MIR -78 184 48 283 326 30 15 chr2 115722715 115722847 -137533736 + MIR SINE MIR 3 136 -126 1122 186 62 4 chr2 115723140 115723382 -137533201 + MLT1D LTR MaLR 250 505 0 276 30 0 0 chr2 115723743 115723776 -137532807 + (TA)n Simple_repeat Simple_repeat 1 33 0 191 303 101 0 chr2 115724590 115724679 -137531904 - L2 LINE L2 -215 3057 2960 362 239 82 44 chr2 115725220 115725379 -137531204 + MIR3 SINE MIR 3 167 -41 2290 116 0 3 chr2 115726156 115726466 -137530117 + AluSq SINE Alu 1 309 -4 741 272 15 20 chr2 115727384 115727710 -137528873 - MER34C LTR ERV1 -155 430 63 6297 41 0 4 chr2 115728456 115729206 -137527377 + L1PA5 LINE L1 5408 6154 0 279 295 21 0 chr2 115729964 115730059 -137526524 - L2 LINE L2 -1 3312 3216 24 77 0 0 chr2 115731361 115731413 -137525170 + AT_rich Low_complexity Low_complexity 1 52 0 1821 168 10 26 chr2 115731882 115732185 -137524398 - AluSp SINE Alu -15 298 1 2063 146 0 3 chr2 115732554 115732849 -137523734 + AluSx SINE Alu 1 294 -18 208 314 0 0 chr2 115733016 115733086 -137523497 - MIR SINE MIR -8 254 185 1543 192 3 7 chr2 115733401 115733709 -137522874 - L1MA5 LINE L1 -7 6293 5987 1848 162 14 22 chr2 115733809 115734174 -137522409 - L1MA5 LINE L1 -297 6003 5642 2657 205 28 24 chr2 115734176 115734887 -137521696 + L1 LINE L1 3884 4597 -1549 31 26 0 0 chr2 115735529 115735567 -137521016 + AT_rich Low_complexity Low_complexity 1 38 0 568 129 71 12 chr2 115735647 115735817 -137520766 + (CATTT)n Simple_repeat Simple_repeat 1 180 0 368 288 93 74 chr2 115735927 115736461 -137520122 - L1ME LINE L1 -4903 1167 864 278 122 73 12 chr2 115736461 115736543 -137520040 + (CATTT)n Simple_repeat Simple_repeat 1 87 0 368 288 93 74 chr2 115736543 115736776 -137519807 - L1ME LINE L1 -5206 864 637 220 187 38 9 chr2 115736812 115736923 -137519660 + (CATCT)n Simple_repeat Simple_repeat 1 114 0 304 365 94 19 chr2 115736945 115737211 -137519372 - L1MEd LINE L1 -5045 1074 789 528 133 40 29 chr2 115737213 115737386 -137519197 + (CATCT)n Simple_repeat Simple_repeat 5 179 0 1483 206 50 17 chr2 115737485 115737841 -137518742 - AluJo SINE Alu 0 366 1 712 182 23 15 chr2 115737843 115737975 -137518608 - AluJo/FLAM SINE Alu -169 133 1 244 312 48 0 chr2 115738408 115738533 -137518050 + (CTAGGG)n Simple_repeat Simple_repeat 3 133 0 287 127 0 85 chr2 115738535 115738700 -137517883 + (CAGGG)n Simple_repeat Simple_repeat 5 155 0 384 144 0 69 chr2 115738829 115739002 -137517581 + (CAGGG)n Simple_repeat Simple_repeat 1 161 0 301 176 0 84 chr2 115739053 115739362 -137517221 + (CAGGG)n Simple_repeat Simple_repeat 1 283 0 288 127 0 75 chr2 115739495 115739629 -137516954 + (CAGGG)n Simple_repeat Simple_repeat 1 124 0 256 213 5 80 chr2 115739735 115739923 -137516660 + (CAGAG)n Simple_repeat Simple_repeat 5 178 0 * 389 207 0 67 chr2 115739895 115740074 -137516509 + (CAGGG)n Simple_repeat Simple_repeat 1 167 0 203 119 0 90 chr2 115740092 115740159 -137516424 + (CCCTG)n Simple_repeat Simple_repeat 1 61 0 735 134 0 17 chr2 115740213 115740332 -137516251 - AluJb SINE Alu -179 133 17 341 275 16 77 chr2 115740334 115740516 -137516067 + MIR SINE MIR 92 262 0 385 281 54 0 chr2 115740633 115740800 -137515783 + (CCCTAG)n Simple_repeat Simple_repeat 2 177 0 296 192 0 96 chr2 115740984 115741182 -137515401 + (CAGGG)n Simple_repeat Simple_repeat 1 179 0 231 144 0 90 chr2 115741246 115741413 -137515170 + (CAGGG)n Simple_repeat Simple_repeat 5 156 0 410 283 40 0 chr2 115741453 115741605 -137514978 + (CTAGGG)n Simple_repeat Simple_repeat 3 160 0 343 290 47 0 chr2 115741636 115741805 -137514778 + (CTAGGG)n Simple_repeat Simple_repeat 3 179 0 314 278 59 6 chr2 115741891 115742060 -137514523 + (CTAGGG)n Simple_repeat Simple_repeat 1 178 0 213 103 0 69 chr2 115742061 115742119 -137514464 + (CAGGG)n Simple_repeat Simple_repeat 1 54 0 270 314 29 29 chr2 115742231 115742406 -137514177 + (CTAGGG)n Simple_repeat Simple_repeat 4 178 0 214 145 7 76 chr2 115742463 115742608 -137513975 + (CAGGG)n Simple_repeat Simple_repeat 2 136 0 334 254 48 24 chr2 115742684 115742849 -137513734 + (CTAGGG)n Simple_repeat Simple_repeat 1 169 0 * 396 147 0 123 chr2 115742796 115743000 -137513583 + (CAGGG)n Simple_repeat Simple_repeat 1 179 0 * 409 271 47 0 chr2 115742878 115743048 -137513535 + (CTAGGG)n Simple_repeat Simple_repeat 1 178 0 221 125 0 21 chr2 115743065 115743113 -137513470 + (CAGGG)n Simple_repeat Simple_repeat 1 47 0 374 184 0 72 chr2 115743196 115743348 -137513235 + (CAGGG)n Simple_repeat Simple_repeat 1 141 0 395 263 53 0 chr2 115743387 115743539 -137513044 + (CTAGGG)n Simple_repeat Simple_repeat 1 160 0 274 194 0 92 chr2 115743514 115743710 -137512873 + (CAGGG)n Simple_repeat Simple_repeat 2 179 0 * 190 143 41 0 chr2 115743771 115743820 -137512763 + (CTAGGG)n Simple_repeat Simple_repeat 2 52 0 350 193 6 65 chr2 115743916 115744330 -137512253 + (CAGGG)n Simple_repeat Simple_repeat 1 389 0 841 261 105 33 chr2 115745167 115745519 -137511064 - HSREP522 Satellite telomeric -171 377 1 4662 226 67 9 chr2 115745654 115746944 -137509639 + L1 LINE L1 2785 4148 -1998 2556 111 83 11 chr2 115746944 115747412 -137509171 - HSREP522 Satellite telomeric 0 504 3 1412 191 131 33 chr2 115747433 115748194 -137508389 - TAR1 Satellite telomeric -244 1867 1032 207 129 0 0 chr2 115748625 115748656 -137507927 - SUBTEL_sa Satellite Satellite -129 45 15 329 293 56 37 chr2 115748669 115748841 -137507742 - L1MEc LINE L1 -3385 3155 2977 1452 213 22 0 chr2 115748841 115749109 -137507474 - AluJo SINE Alu -38 274 1 329 293 56 37 chr2 115749109 115749151 -137507432 - L1MEc LINE L1 -3563 2977 2937 1334 264 42 50 chr2 115749193 115749697 -137506886 - LTR53 LTR ERVL 0 519 20 669 238 81 84 chr2 115749708 115750564 -137506019 - L1MEc LINE L1 -3753 2787 1883 28 86 0 0 chr2 115750756 115750826 -137505757 + AT_rich Low_complexity Low_complexity 1 70 0 1927 78 0 11 chr2 115750899 115751167 -137505416 + L1PA8 LINE L1 5906 6170 -2 21 0 0 0 chr2 115751167 115751188 -137505395 + AT_rich Low_complexity Low_complexity 1 21 0 348 333 85 79 chr2 115751612 115751954 -137504629 - L1M4 LINE L1 -2683 3463 3120 281 322 8 0 chr2 115752032 115752153 -137504430 - L1M4 LINE L1 -3135 3011 2890 456 339 88 45 chr2 115752197 115752334 -137504249 - L1M4 LINE L1 -3128 3018 2888 2011 151 0 3 chr2 115752334 115752632 -137503951 - AluSx SINE Alu -15 297 1 456 339 88 45 chr2 115752632 115752858 -137503725 - L1M4 LINE L1 -3258 2888 2634 195 47 23 47 chr2 115752858 115752901 -137503682 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 456 339 88 45 chr2 115752901 115752934 -137503649 - L1M4 LINE L1 -3512 2634 2604 767 232 6 0 chr2 115753499 115753667 -137502916 + L1MB3 LINE L1 5659 5827 -344 866 133 16 0 chr2 115753667 115753795 -137502788 - BC200 scRNA scRNA -57 143 14 1178 212 106 0 chr2 115753798 115754081 -137502502 + L1MB3 LINE L1 5798 6110 -73 200 396 0 0 chr2 115754850 115754941 -137501642 + (CGTG)n Simple_repeat Simple_repeat 4 94 0 186 43 0 0 chr2 115755367 115755390 -137501193 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 1035 254 85 0 chr2 115755437 115755767 -137500816 - MER47A DNA MER2_type 0 366 9 192 261 159 0 chr2 115755788 115755857 -137500726 + MIR SINE MIR 64 143 -119 233 268 0 9 chr2 115755929 115756041 -137500542 + (TATG)n Simple_repeat Simple_repeat 4 114 0 1273 267 32 24 chr2 115756649 115757144 -137499439 - L1MC4a LINE L1 -9 7799 7301 610 135 0 69 chr2 115757876 115758172 -137498411 + (CAGC)n Simple_repeat Simple_repeat 1 275 0 771 46 0 77 chr2 115758193 115758388 -137498195 + (CAGC)n Simple_repeat Simple_repeat 1 180 0 640 67 3 79 chr2 115758402 115758706 -137497877 + (CAGC)n Simple_repeat Simple_repeat 1 280 0 472 61 0 70 chr2 115758749 115758864 -137497719 + (CAGC)n Simple_repeat Simple_repeat 4 110 0 810 58 0 63 chr2 115758883 115759072 -137497511 + (CAGC)n Simple_repeat Simple_repeat 4 180 0 416 66 0 66 chr2 115759115 115759221 -137497362 + (CAGC)n Simple_repeat Simple_repeat 4 102 0 697 85 0 69 chr2 115759254 115759974 -137496609 + (CAGC)n Simple_repeat Simple_repeat 1 670 0 534 66 0 96 chr2 115760005 115760203 -137496380 + (CAGC)n Simple_repeat Simple_repeat 2 180 0 769 89 0 64 chr2 115760240 115760605 -137495978 + (CAGC)n Simple_repeat Simple_repeat 1 341 0 775 42 0 74 chr2 115760637 115760826 -137495757 + (CAGC)n Simple_repeat Simple_repeat 4 178 0 2568 57 0 0 chr2 115762134 115762433 -137494150 - AluY SINE Alu -12 299 1 412 350 25 15 chr2 115762567 115762764 -137493819 + MIR SINE MIR 64 262 0 2252 133 0 0 chr2 115764047 115764349 -137492234 - AluSx SINE Alu -10 302 1 1817 115 42 4 chr2 115764681 115764941 -137491642 + AluY SINE Alu 38 307 -4 293 295 18 0 chr2 115764942 115765054 -137491529 + L1M4 LINE L1 3270 3383 -2763 1459 211 151 10 chr2 115765064 115765448 -137491135 - MER66A LTR ERV1 -40 438 1 1481 164 39 14 chr2 115765448 115765728 -137490855 - MER66A-int LTR ERV1 0 6676 6390 931 253 55 23 chr2 115765704 115766012 -137490571 - MER4B-int LTR ERV1 -1722 4954 4637 * 1650 158 8 19 chr2 115766012 115766307 -137490276 - AluSx SINE Alu 0 319 28 368 276 23 58 chr2 115766308 115766482 -137490101 - MER4B-int LTR ERV1 -4201 2557 2390 2176 146 0 0 chr2 115766483 115766791 -137489792 - AluSx SINE Alu -4 308 1 1996 155 7 7 chr2 115766946 115767250 -137489333 - AluJb SINE Alu -8 304 1 198 0 0 0 chr2 115768287 115768309 -137488274 + (TTA)n Simple_repeat Simple_repeat 2 23 0 2094 113 7 0 chr2 115768315 115768589 -137487994 - AluSx SINE Alu -36 276 1 396 252 13 26 chr2 115768611 115768766 -137487817 - L1M4 LINE L1 -1014 5132 4980 23 0 0 0 chr2 115768799 115768822 -137487761 + AT_rich Low_complexity Low_complexity 1 23 0 32 57 0 0 chr2 115769131 115769184 -137487399 + AT_rich Low_complexity Low_complexity 1 53 0 195 42 0 0 chr2 115771005 115771029 -137485554 + (A)n Simple_repeat Simple_repeat 1 24 0 193 311 108 0 chr2 115772358 115772432 -137484151 - L2 LINE L2 -3 3269 3188 36 0 0 0 chr2 115772713 115772749 -137483834 + AT_rich Low_complexity Low_complexity 1 36 0 602 126 107 0 chr2 115772749 115772852 -137483731 - AluSq/x SINE Alu -197 115 2 673 210 48 40 chr2 115776065 115776317 -137480266 + L1MC5 LINE L1 7672 7925 -36 893 104 0 0 chr2 115776511 115776626 -137479957 - AluSc SINE Alu -194 115 1 650 257 45 41 chr2 115777768 115778013 -137478570 + MIR SINE MIR 17 262 0 33 25 0 0 chr2 115778426 115778466 -137478117 + AT_rich Low_complexity Low_complexity 1 40 0 417 95 0 0 chr2 115779813 115779876 -137476707 + (CA)n Simple_repeat Simple_repeat 1 63 0 317 193 64 92 chr2 115780274 115780383 -137476200 - MER103 DNA DNA -51 115 10 747 178 20 14 chr2 115781653 115781799 -137474784 - MER45A DNA AcHobo -28 150 4 180 0 0 0 chr2 115782212 115782232 -137474351 + (GCCTG)n Simple_repeat Simple_repeat 1 20 0 549 335 103 11 chr2 115782594 115782979 -137473604 + L1M4 LINE L1 4886 5302 -844 217 241 11 11 chr2 115782979 115783066 -137473517 + GA-rich Low_complexity Low_complexity 4 90 0 304 229 46 37 chr2 115783454 115783563 -137473020 + L1ME4a LINE L1 5956 6065 -56 1347 186 22 82 chr2 115785017 115785432 -137471151 - MLT1B LTR MaLR 0 390 1 34 0 0 0 chr2 115786143 115786177 -137470406 + AT_rich Low_complexity Low_complexity 1 34 0 1427 170 0 4 chr2 115786713 115786954 -137469629 + AluJb SINE Alu 43 306 0 184 42 0 0 chr2 115786954 115786978 -137469605 + (CAAAA)n Simple_repeat Simple_repeat 3 175 0 229 222 202 20 chr2 115787524 115787623 -137468960 + MIR SINE MIR 56 172 -90 318 326 91 8 chr2 115788796 115788928 -137467655 + L3 LINE CR1 570 712 -865 1492 143 8 26 chr2 115789052 115789317 -137467266 + AluJo SINE Alu 28 287 -25 212 319 17 42 chr2 115789337 115789456 -137467127 + L3 LINE CR1 855 970 -607 2508 17 0 3 chr2 115789625 115789917 -137466666 + AluYa5 SINE Alu 20 310 -1 185 360 44 22 chr2 115790072 115790208 -137466375 + L3 LINE CR1 1299 1437 -140 200 258 65 0 chr2 115790395 115790457 -137466126 - MIR SINE MIR -163 99 34 700 278 51 5 chr2 115790870 115791086 -137465497 - MIR SINE MIR -3 259 34 1003 214 10 0 chr2 115791936 115792142 -137464441 - MER3 DNA MER1_type -1 208 1 672 235 115 65 chr2 115793100 115793360 -137463223 - ORSL DNA AcHobo -2 273 1 549 257 65 101 chr2 115793545 115793883 -137462700 - MLT1J LTR MaLR -163 348 23 663 293 29 15 chr2 115794220 115794425 -137462158 - MIR SINE MIR -19 243 36 503 208 19 88 chr2 115795118 115795277 -137461306 + MLT1J LTR MaLR 224 371 -140 276 130 0 0 chr2 115796764 115796810 -137459773 + (ATG)n Simple_repeat Simple_repeat 2 47 0 397 274 28 0 chr2 115797060 115797166 -137459417 - MIR SINE MIR -60 202 94 436 330 128 0 chr2 115802285 115802488 -137454095 - MIR SINE MIR -27 235 7 1902 178 80 10 chr2 115803395 115803795 -137452788 + MSTC LTR MaLR 1 428 0 257 261 21 0 chr2 115803843 115803916 -137452667 + MER91B DNA MER1_type 4 81 -59 1901 111 31 3 chr2 115804163 115804451 -137452132 + AluSg SINE Alu 1 296 -14 413 165 0 24 chr2 115804463 115804548 -137452035 + HsTC2 DNA Tc2 1807 1889 -9 1600 240 159 18 chr2 115804554 115805182 -137451401 - L2 LINE L2 -1099 2215 1499 2548 220 70 29 chr2 115805349 115806274 -137450309 - L1MD2 LINE L1 -533 5826 4831 1872 159 0 0 chr2 115806274 115806569 -137450014 + AluSx SINE Alu 1 295 -17 2548 220 70 29 chr2 115806569 115806921 -137449662 - L1MD2 LINE L1 -1528 4831 4495 196 29 29 29 chr2 115807487 115807508 -137449075 + (TCCA)n Simple_repeat Simple_repeat 3 26 -10 665 269 19 28 chr2 115807508 115807720 -137448863 + MER63A DNA MER1_type 1 210 0 196 29 29 29 chr2 115807720 115807732 -137448851 + (TCCA)n Simple_repeat Simple_repeat 25 36 0 447 283 33 8 chr2 115808138 115808258 -137448325 + MIR SINE MIR 1 123 -139 1722 234 103 54 chr2 115808262 115808450 -137448133 + MLT1E3 LTR MaLR 5 182 -442 1444 171 148 0 chr2 115808450 115808713 -137447870 + AluJb SINE Alu 1 302 0 1722 234 103 54 chr2 115808713 115809114 -137447469 + MLT1E3 LTR MaLR 182 623 -1 200 276 164 26 chr2 115809123 115809239 -137447344 + MIR SINE MIR 131 262 0 1076 291 248 23 chr2 115809499 115810026 -137446557 - L2 LINE L2 0 3313 2906 1887 153 10 0 chr2 115810026 115810334 -137446249 - AluJb SINE Alu -1 311 1 1076 291 248 23 chr2 115810334 115811094 -137445489 - L2 LINE L2 -407 2906 1733 224 246 97 66 chr2 115812211 115812377 -137444206 + MIR SINE MIR 85 250 -12 727 294 62 64 chr2 115812510 115813007 -137443576 - MLT1J LTR MaLR -13 498 3 203 296 0 42 chr2 115813821 115813892 -137442691 + MIR SINE MIR 106 173 -89 1968 152 62 5 chr2 115814511 115814879 -137441704 + L1MB5 LINE L1 5773 6161 -13 1803 156 3 7 chr2 115814887 115815188 -137441395 - AluJo SINE Alu -8 304 5 395 246 35 56 chr2 115815698 115815840 -137440743 + MLT1J LTR MaLR 4 142 -369 294 281 80 45 chr2 115815830 115816029 -137440554 + MLT1J LTR MaLR 306 511 0 * 202 163 47 0 chr2 115816447 115816490 -137440093 + T-rich Low_complexity Low_complexity 4 48 0 264 243 45 65 chr2 115816699 115816769 -137439814 - L1ME4a LINE L1 -1 6120 6050 2273 94 3 0 chr2 115816769 115817068 -137439515 - AluSg SINE Alu -10 300 1 264 243 45 65 chr2 115817068 115817239 -137439344 - L1ME4a LINE L1 -71 6050 5838 403 212 50 20 chr2 115817890 115817989 -137438594 + L2 LINE L2 3210 3311 -2 965 131 7 0 chr2 115818318 115818463 -137438120 - AluSg/x SINE Alu -6 304 159 1115 79 0 0 chr2 115818699 115818839 -137437744 - AluSq/x SINE Alu -172 140 1 330 171 0 0 chr2 115819271 115819341 -137437242 + (CAT)n Simple_repeat Simple_repeat 2 71 0 539 295 170 0 chr2 115819355 115819555 -137437028 - MIR SINE MIR -16 246 13 373 225 25 0 chr2 115820225 115820305 -137436278 - MLT1F LTR MaLR -47 495 414 341 292 101 57 chr2 115820383 115820592 -137435991 + MLT1J LTR MaLR 103 320 -191 1487 218 122 64 chr2 115820756 115821224 -137435359 + MLT1F LTR MaLR 1 495 -47 286 228 53 0 chr2 115821357 115821414 -137435169 + L2 LINE L2 3213 3272 0 2234 93 6 6 chr2 115821518 115821829 -137434754 + AluY SINE Alu 1 311 0 379 225 85 31 chr2 115826777 115826906 -137429677 - MIR SINE MIR -80 182 47 430 278 190 10 chr2 115827768 115827973 -137428610 + MLT1J2 LTR MaLR 206 447 -3 432 200 24 0 chr2 115829381 115829466 -137427117 - MER5A DNA MER1_type -77 112 26 198 0 0 0 chr2 115829655 115829677 -137426906 + (CA)n Simple_repeat Simple_repeat 1 22 0 1843 152 7 7 chr2 115829901 115830204 -137426379 - AluJb SINE Alu -9 303 1 225 0 0 0 chr2 115831241 115831266 -137425317 + (TTA)n Simple_repeat Simple_repeat 2 26 0 1975 106 7 0 chr2 115831272 115831546 -137425037 - AluSx SINE Alu -36 276 1 422 248 21 14 chr2 115831578 115831723 -137424860 - L1M4 LINE L1 -1021 5125 4980 23 0 0 0 chr2 115831756 115831779 -137424804 + AT_rich Low_complexity Low_complexity 1 23 0 32 57 0 0 chr2 115832088 115832141 -137424442 + AT_rich Low_complexity Low_complexity 1 53 0 198 0 0 0 chr2 115833964 115833986 -137422597 + (A)n Simple_repeat Simple_repeat 1 22 0 210 311 108 0 chr2 115835315 115835389 -137421194 - L2 LINE L2 -3 3269 3188 36 0 0 0 chr2 115835670 115835706 -137420877 + AT_rich Low_complexity Low_complexity 1 36 0 685 124 86 0 chr2 115835706 115835811 -137420772 - AluSq/x SINE Alu -198 115 2 731 214 48 40 chr2 115839017 115839269 -137417314 + L1MC5 LINE L1 7672 7925 -36 2425 157 24 12 chr2 115840266 115840499 -137416084 - MSTB1 LTR MaLR 0 432 190 1877 96 0 42 chr2 115840499 115840760 -137415823 - AluSx SINE Alu -9 303 54 2425 157 24 12 chr2 115840760 115840952 -137415631 - MSTB1 LTR MaLR -242 190 2 566 230 14 34 chr2 115841099 115841247 -137415336 + MIR SINE MIR 67 211 -51 2360 103 0 10 chr2 115842290 115842602 -137413981 - AluSc SINE Alu 0 309 1 605 253 45 41 chr2 115843745 115843990 -137412593 + MIR SINE MIR 17 262 0 183 42 0 0 chr2 115844409 115844433 -137412150 + (TAA)n Simple_repeat Simple_repeat 2 25 0 295 331 25 38 chr2 115846952 115847112 -137409471 + MIR3 SINE MIR 19 176 -32 251 339 8 16 chr2 115847139 115847263 -137409320 - MIR SINE MIR 0 262 140 2107 103 0 55 chr2 115847387 115847698 -137408885 - AluSx SINE Alu -16 296 3 974 187 0 0 chr2 115847746 115847922 -137408661 + FRAM SINE Alu 1 174 0 1265 281 72 38 chr2 115847934 115848561 -137408022 + L1ME3A LINE L1 4418 5022 -1148 1953 111 201 8 chr2 115848561 115848920 -137407663 + MSTA LTR MaLR 1 428 0 1265 281 72 38 chr2 115848920 115849228 -137407355 + L1ME3A LINE L1 5022 5318 -852 1767 85 16 8 chr2 115849228 115849486 -137407097 + L1MA2 LINE L1 6045 6304 0 1265 281 72 38 chr2 115849486 115849970 -137406613 + L1ME3A LINE L1 5318 5898 -272 464 261 0 0 chr2 115850348 115850459 -137406124 - MIR SINE MIR -92 170 60 1605 158 71 63 chr2 115852168 115852535 -137404048 + MLT1A2 LTR MaLR 5 374 0 26 50 0 0 chr2 115852782 115852822 -137403761 + AT_rich Low_complexity Low_complexity 1 40 0 2386 158 116 0 chr2 115854336 115854760 -137401823 + MER101 LTR ERV1 1 473 -1 283 226 155 0 chr2 115855129 115855213 -137401370 + MIR SINE MIR 51 147 -61 701 135 115 20 chr2 115855323 115855471 -137401112 - MIR SINE MIR -41 221 60 1391 202 6 47 chr2 115856236 115856558 -137400025 + AluJo SINE Alu 1 309 -3 21 0 0 0 chr2 115856584 115856605 -137399978 + AT_rich Low_complexity Low_complexity 1 21 0 912 213 170 13 chr2 115856628 115856991 -137399592 + MER63 DNA MER1_type 6 1053 -7 522 192 85 15 chr2 115858204 115858334 -137398249 + LTR54 LTR ERV1 37 175 -335 2056 146 143 11 chr2 115858334 115858712 -137397871 + MSTA LTR MaLR 1 428 0 635 120 0 0 chr2 115858733 115858825 -137397758 - AluS SINE Alu -220 93 2 4358 195 47 40 chr2 115859174 115859338 -137397245 - L1MD1 LINE L1 0 6636 6475 2238 108 3 10 chr2 115859338 115859652 -137396931 + AluSx SINE Alu 1 312 0 4358 195 47 40 chr2 115859652 115860472 -137396111 - L1MD1 LINE L1 -161 6475 5639 2267 71 50 0 chr2 115860472 115860754 -137395829 + AluSc SINE Alu 1 296 -13 4358 195 47 40 chr2 115860754 115860993 -137395590 - L1MD1 LINE L1 -997 5639 5403 1672 151 8 4 chr2 115861002 115861260 -137395323 - AluSx SINE Alu -21 291 33 5221 199 55 18 chr2 115861270 115862416 -137394167 - L1MC3 LINE L1 -8 7777 6589 824 215 68 32 chr2 115862391 115862670 -137393913 - L1MD1 LINE L1 -4141 2399 2111 * 871 160 67 5 chr2 115862686 115862880 -137393703 - L1MD1 LINE L1 -4471 2069 1864 286 316 23 35 chr2 115864587 115864761 -137391822 + L2 LINE L2 2851 3022 -291 243 242 0 0 chr2 115864770 115864832 -137391751 + (CA)n Simple_repeat Simple_repeat 2 63 0 855 219 12 0 chr2 115865217 115865476 -137391107 + FRAM SINE Alu 2 262 0 297 100 0 0 chr2 115865528 115865578 -137391005 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 1626 182 0 7 chr2 115865592 115865861 -137390722 - AluJb SINE Alu -45 267 1 261 0 0 0 chr2 115866331 115866360 -137390223 + (ATG)n Simple_repeat Simple_repeat 1 29 0 403 304 98 10 chr2 115866371 115866575 -137390008 - MIR SINE MIR 0 262 41 202 139 0 23 chr2 115866881 115866924 -137389659 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 2578 76 35 3 chr2 115868008 115868352 -137388231 + THE1A LTR MaLR 1 355 0 11672 97 11 2 chr2 115868352 115869917 -137386666 + THE1A-int LTR MaLR 1 1580 0 2845 68 3 3 chr2 115869917 115870272 -137386311 + THE1A LTR MaLR 1 355 0 180 0 0 0 chr2 115870517 115870537 -137386046 + (T)n Simple_repeat Simple_repeat 1 20 0 309 293 210 0 chr2 115871354 115871521 -137385062 + MIR SINE MIR 60 261 -1 204 143 0 48 chr2 115871765 115871807 -137384776 - MIR SINE MIR -14 248 209 1641 206 79 3 chr2 115872232 115872600 -137383983 + MSTD LTR MaLR 1 396 0 2277 93 0 40 chr2 115872995 115873316 -137383267 + AluSx SINE Alu 1 308 -4 180 111 0 0 chr2 115873380 115873407 -137383176 + (A)n Simple_repeat Simple_repeat 1 27 0 282 264 172 17 chr2 115873496 115873670 -137382913 + L1MC4a LINE L1 5266 5466 -2342 1616 224 49 30 chr2 115873676 115874065 -137382518 - MER63B DNA MER1_type -626 436 37 216 0 0 0 chr2 115874065 115874089 -137382494 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 1616 224 49 30 chr2 115874089 115874127 -137382456 - MER63B DNA MER1_type -1025 37 1 263 135 0 33 chr2 115874149 115874204 -137382379 - Alu SINE Alu -259 41 2 1043 279 90 32 chr2 115874204 115874727 -137381856 + L1MC4a LINE L1 5486 6038 -1770 3481 189 33 10 chr2 115875258 115875931 -137380652 - L1MB7 LINE L1 -16 6168 5481 736 211 50 107 chr2 115876713 115876906 -137379677 - L1MC4 LINE L1 -89 7953 7786 2064 125 31 0 chr2 115876906 115877195 -137379388 - AluSx SINE Alu -14 298 1 736 211 50 107 chr2 115877195 115877338 -137379245 - L1MC4 LINE L1 -256 7786 7636 1035 115 0 16 chr2 115877357 115877417 -137379166 + (GGGA)n Simple_repeat Simple_repeat 1 239 0 1035 115 0 16 chr2 115877417 115877600 -137378983 + (GGGA)n Simple_repeat Simple_repeat 1 180 0 242 254 140 0 chr2 115877707 115877821 -137378762 + L2 LINE L2 678 807 -2507 1650 245 42 53 chr2 115877830 115878175 -137378408 + L1MEc LINE L1 606 942 -5454 2232 119 0 3 chr2 115878175 115878477 -137378106 - AluSq SINE Alu -2 311 11 1650 245 42 53 chr2 115878477 115878751 -137377832 + L1MEc LINE L1 942 1218 -5178 1716 77 5 5 chr2 115879004 115879226 -137377357 - AluSp SINE Alu -7 306 85 1767 268 103 13 chr2 115879512 115880521 -137376062 + L2 LINE L2 2172 3275 -38 364 214 205 0 chr2 115880613 115880725 -137375858 + MIR SINE MIR 62 196 -66 943 279 22 9 chr2 115881196 115881522 -137375061 + L1ME2 LINE L1 5712 6026 -140 244 133 0 0 chr2 115882437 115882482 -137374101 - L1MA5 LINE L1 0 6300 6256 2260 105 3 7 chr2 115882508 115882812 -137373771 + AluSx SINE Alu 1 303 -9 33 43 0 0 chr2 115883720 115883767 -137372816 + AT_rich Low_complexity Low_complexity 1 47 0 3361 172 89 22 chr2 115884303 115884977 -137371606 + LTR62 LTR ERVK 1 719 0 285 326 108 16 chr2 115885082 115885273 -137371310 - MIR SINE MIR -35 227 21 2375 122 42 28 chr2 115885349 115885775 -137370808 + L1MA8 LINE L1 5860 6291 0 461 231 31 31 chr2 115885852 115885982 -137370601 - MER103 DNA DNA -12 154 25 533 241 72 6 chr2 115887168 115887334 -137369249 - MER45A DNA AcHobo 0 178 2 2129 104 4 0 chr2 115887370 115887649 -137368934 - AluSx SINE Alu -24 288 9 470 280 37 26 chr2 115888410 115888599 -137367984 - MARNA DNA Mariner -108 478 288 310 0 43 22 chr2 115889142 115889188 -137367395 + (GAAA)n Simple_repeat Simple_repeat 2 48 0 426 272 82 57 chr2 115890018 115890176 -137366407 + MER91B DNA MER1_type 29 190 0 713 265 101 48 chr2 115890380 115890738 -137365845 - MLT1J LTR MaLR -49 462 86 6989 118 54 12 chr2 115891420 115892242 -137364341 + Tigger1 DNA MER2_type 24 906 -1512 2038 106 16 16 chr2 115892242 115892545 -137364038 + AluSq SINE Alu 1 303 -10 6989 118 54 12 chr2 115892545 115892825 -137363758 + Tigger1 DNA MER2_type 906 1173 -1245 4524 28 0 5 chr2 115892832 115893397 -137363186 - L1PA4 LINE L1 -2787 3359 2798 16973 26 0 0 chr2 115893397 115896182 -137360401 + L1PA4 LINE L1 3357 6172 0 8163 125 10 10 chr2 115896190 115897426 -137359157 + Tigger1 DNA MER2_type 1183 2418 0 226 380 50 8 chr2 115898224 115898345 -137358238 + MIR SINE MIR 96 221 -41 186 323 121 0 chr2 115898402 115898501 -137358082 - L2 LINE L2 -963 2351 2241 2778 139 59 49 chr2 115898564 115898778 -137357805 - MLT2B1 LTR ERVL -3 517 307 2518 124 6 3 chr2 115898778 115899141 -137357442 - THE1B LTR MaLR 0 364 1 2778 139 59 49 chr2 115899141 115899438 -137357145 - MLT2B1 LTR ERVL -213 307 1 523 280 241 21 chr2 115899450 115899935 -137356648 + L2 LINE L2 2380 2971 -343 1322 237 37 59 chr2 115900068 115900443 -137356140 + MLT1A2 LTR MaLR 8 374 0 255 250 15 15 chr2 115900566 115900634 -137355949 + L2 LINE L2 3246 3313 0 2404 86 0 3 chr2 115901031 115901345 -137355238 - AluSp SINE Alu 0 313 1 793 223 12 8 chr2 115902645 115902814 -137353769 + MIR SINE MIR 10 175 -67 499 289 60 0 chr2 115902903 115903069 -137353514 + MLT1I LTR MaLR 232 407 -2 276 215 0 51 chr2 115903169 115903248 -137353335 + L2 LINE L2 3192 3266 -6 207 189 0 0 chr2 115903396 115903449 -137353134 + (CA)n Simple_repeat Simple_repeat 2 54 0 677 129 0 7 chr2 115903513 115903653 -137352930 + (CA)n Simple_repeat Simple_repeat 2 140 0 1893 197 60 26 chr2 115906993 115907445 -137349138 - MLT1C LTR MaLR 0 467 1 7880 120 35 25 chr2 115907929 115908866 -137347717 - HSMAR2 DNA Mariner 0 1302 347 2053 107 3 39 chr2 115908866 115909176 -137347407 - AluSx SINE Alu -13 299 1 7880 120 35 25 chr2 115909176 115909526 -137347057 - HSMAR2 DNA Mariner -955 347 2 1893 198 25 14 chr2 115909564 115909932 -137346651 - MLT1C LTR MaLR -95 372 1 186 318 30 0 chr2 115910043 115910109 -137346474 + MER5B DNA MER1_type 6 73 -105 341 283 24 8 chr2 115912511 115912645 -137343938 + MLT1J LTR MaLR 389 506 -5 3059 148 30 4 chr2 115913884 115914358 -137342225 + MER66B LTR ERV1 1 486 0 278 345 104 32 chr2 115915348 115915541 -137341042 + L2 LINE L2 2933 3159 -113 1997 207 97 7 chr2 115915541 115916004 -137340579 - MLT1D LTR MaLR 0 505 1 278 345 104 32 chr2 115916004 115916126 -137340457 + L2 LINE L2 3159 3271 -1 1580 77 5 0 chr2 115916187 115916396 -137340187 - AluY SINE Alu 0 311 102 1004 163 5 5 chr2 115916936 115917120 -137339463 + LTR37A LTR ERV1 222 405 -21 1138 243 43 82 chr2 115917785 115917936 -137338647 - MER39 LTR ERV1 0 707 552 1958 151 3 0 chr2 115917936 115918247 -137338336 + AluSx SINE Alu 1 312 0 1138 243 43 82 chr2 115918247 115918561 -137338022 - MER39 LTR ERV1 -155 552 260 329 231 46 65 chr2 115918528 115918636 -137337947 - LTR48B LTR ERV1 -538 106 1 * 1897 150 3 0 chr2 115919202 115919495 -137337088 - AluSx SINE Alu -18 294 1 187 167 28 0 chr2 115919577 115919613 -137336970 - L2 LINE L2 -246 3067 3031 1195 221 17 13 chr2 115919624 115919923 -137336660 - L1M4 LINE L1 -2077 4069 3770 3021 105 12 0 chr2 115919978 115920398 -137336185 + MSTA LTR MaLR 2 426 -2 1672 178 9 52 chr2 115920868 115921211 -137335372 - MLT1B LTR MaLR 0 390 63 222 206 0 0 chr2 115921841 115921904 -137334679 + T-rich Low_complexity Low_complexity 1 63 0 227 330 56 39 chr2 115922157 115922390 -137334193 + L1ME3A LINE L1 5540 5776 -345 285 279 13 25 chr2 115922744 115922823 -137333760 - MIR SINE MIR -165 97 20 480 202 0 20 chr2 115923553 115923652 -137332931 + Tigger3(Golem) DNA MER2_type 21 117 -2912 448 131 0 0 chr2 115923641 115923702 -137332881 + Tigger3(Golem) DNA MER2_type 2927 2987 -42 * 6493 126 54 8 chr2 115923984 115925055 -137331528 + Tigger3b DNA MER2_type 111 1231 0 394 175 0 21 chr2 115925212 115925309 -137331274 + CT-rich Low_complexity Low_complexity 1 95 0 277 204 148 0 chr2 115925854 115925942 -137330641 - MER63 DNA MER1_type -310 752 44 396 219 97 18 chr2 115925989 115926103 -137330480 + L1ME3A LINE L1 5848 5970 -192 269 250 0 0 chr2 115926119 115926191 -137330392 + L1ME3A LINE L1 6028 6099 -71 * 549 14 0 29 chr2 115926182 115926252 -137330331 - L1P4 LINE L1 -450 5718 5651 373 259 141 53 chr2 115926450 115926535 -137330048 + MIR SINE MIR 77 153 -109 2315 87 3 0 chr2 115926535 115926834 -137329749 + AluSp SINE Alu 1 300 -13 373 259 141 53 chr2 115926834 115926918 -137329665 + MIR SINE MIR 153 261 -1 352 313 68 82 chr2 115927446 115927884 -137328699 - L3 LINE CR1 -4 1573 1142 443 176 33 0 chr2 115928386 115928477 -137328106 - FAM SINE Alu -6 179 86 6202 94 9 12 chr2 115928479 115929344 -137327239 - L1PA11 LINE L1 -2 6172 5310 2132 79 0 0 chr2 115929788 115930068 -137326515 - AluY SINE Alu -8 303 24 6352 209 64 28 chr2 115930117 115931834 -137324749 + L1MDa LINE L1 35 1690 -4850 1820 155 57 35 chr2 115931834 115932201 -137324382 - THE1C LTR MaLR 0 375 1 6352 209 64 28 chr2 115932201 115932460 -137324123 + L1MDa LINE L1 1690 1938 -4602 2401 111 43 6 chr2 115932460 115932811 -137323772 + THE1B LTR MaLR 1 364 0 6352 209 64 28 chr2 115932811 115933869 -137322714 + L1MDa LINE L1 1938 3494 -3046 2115 105 0 3 chr2 115933869 115934165 -137322418 + AluSx SINE Alu 3 297 -15 6352 209 64 28 chr2 115934165 115934264 -137322319 + L1MDa LINE L1 3494 3588 -2952 2380 194 51 59 chr2 115934264 115934813 -137321770 - L1MDa LINE L1 -4263 2277 1734 2099 109 0 13 chr2 115934813 115935115 -137321468 - AluSx SINE Alu -14 298 1 2380 194 51 59 chr2 115935115 115935296 -137321287 - L1MDa LINE L1 -4806 1734 1553 816 283 75 19 chr2 115935474 115935782 -137320801 - L1MDa LINE L1 -6196 344 20 230 267 33 0 chr2 115938021 115938081 -137318502 + L2 LINE L2 3210 3271 -1 1982 194 29 3 chr2 115938719 115939105 -137317478 - MSTD LTR MaLR 0 396 1 334 221 13 13 chr2 115939511 115939588 -137316995 + HAL1 LINE L1 1578 1654 -853 340 169 0 42 chr2 115939651 115939722 -137316861 + MLT1I LTR MaLR 80 147 -262 1040 318 85 29 chr2 115940572 115941455 -137315128 + L1 LINE L1 2232 3163 -2983 1732 150 3 51 chr2 115941622 115941936 -137314647 + AluJo SINE Alu 5 303 -9 524 283 151 40 chr2 115941954 115942357 -137314226 + L1 LINE L1 4931 5378 -768 2791 153 17 4 chr2 115943105 115943570 -137313013 - L1MB3 LINE L1 0 6183 5713 433 254 108 49 chr2 115943733 115943918 -137312665 + MIR SINE MIR 60 255 -7 288 0 0 0 chr2 115944033 115944065 -137312518 + (TG)n Simple_repeat Simple_repeat 2 33 0 486 197 14 170 chr2 115944422 115944640 -137311943 + MLT1E2 LTR MaLR 1 184 -442 741 196 0 21 chr2 115944648 115944791 -137311792 + FLAM_C SINE Alu 4 143 0 1573 245 83 13 chr2 115944799 115945183 -137311400 + MLT1E2 LTR MaLR 215 625 -1 271 327 9 28 chr2 115945204 115945311 -137311272 - MIR SINE MIR -32 230 126 247 191 0 0 chr2 115945312 115945354 -137311229 - MLT1B LTR MaLR 0 390 349 * 699 98 11 0 chr2 115945350 115945442 -137311141 - MLT1B LTR MaLR -297 93 1 270 297 16 55 chr2 115945443 115945571 -137311012 - MIR SINE MIR -134 128 6 2801 10 0 10 chr2 115946459 115946771 -137309812 + AluYa5 SINE Alu 1 309 -2 225 354 21 0 chr2 115947303 115947399 -137309184 - MIR SINE MIR -124 138 41 2521 57 0 0 chr2 115947980 115948278 -137308305 + AluY SINE Alu 1 298 -13 367 302 12 29 chr2 115949149 115949321 -137307262 + L1MEc LINE L1 1370 1538 -4858 2268 124 0 0 chr2 115949923 115950222 -137306361 + AluSx SINE Alu 9 307 -5 198 0 0 0 chr2 115950222 115950244 -137306339 + (TA)n Simple_repeat Simple_repeat 2 23 0 5611 229 61 36 chr2 115950303 115952606 -137303977 + L1MB4 LINE L1 8 2484 -4160 420 182 23 0 chr2 115952616 115952748 -137303835 + (TA)n Simple_repeat Simple_repeat 1 135 0 1476 233 52 11 chr2 115952805 115953372 -137303211 + L1MB4 LINE L1 2475 3059 -3585 366 248 36 29 chr2 115953477 115953614 -137302969 + L1MB4 LINE L1 3043 3180 -3464 * 3427 196 76 34 chr2 115953594 115953621 -137302962 + L1MB4 LINE L1 5377 5401 -1277 2232 118 0 0 chr2 115953621 115953917 -137302666 + AluSx SINE Alu 1 296 -16 3427 196 76 34 chr2 115953917 115954896 -137301687 + L1MB4 LINE L1 5401 6449 -229 2381 101 3 0 chr2 115954896 115955203 -137301380 + AluSp SINE Alu 1 308 -5 3427 196 76 34 chr2 115955203 115955431 -137301152 + L1MB4 LINE L1 6449 6666 -12 230 322 23 11 chr2 115956157 115956244 -137300339 - L2 LINE L2 0 3272 3185 2243 129 79 15 chr2 115957202 115957542 -137299041 - THE1B LTR MaLR -2 362 1 419 250 173 6 chr2 115957724 115957892 -137298691 - L2 LINE L2 -773 2541 2346 194 302 48 0 chr2 115958015 115958078 -137298505 - MIR SINE MIR 0 262 197 325 172 0 78 chr2 115958718 115958782 -137297801 - L1M4 LINE L1 -2593 3553 3495 * 6846 67 3 0 chr2 115958776 115959645 -137296938 - L1PA5 LINE L1 -2 6152 5281 775 307 89 50 chr2 115960391 115960955 -137295628 - L2 LINE L2 -4 3309 2743 1019 293 43 14 chr2 115961471 115961822 -137294761 - L1MEc LINE L1 -5725 671 311 1285 236 25 39 chr2 115961822 115961853 -137294730 + L1MEc LINE L1 737 767 -5629 851 139 0 0 chr2 115961853 115961999 -137294584 + FLAM_C SINE Alu 2 147 0 1285 236 25 39 chr2 115961999 115962401 -137294182 + L1MEc LINE L1 767 1166 -5230 355 280 112 0 chr2 115962504 115962611 -137293972 - MIR SINE MIR -21 241 123 746 208 143 0 chr2 115962654 115962808 -137293775 - MER45A DNA AcHobo -1 177 2 180 0 0 0 chr2 115963270 115963290 -137293293 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1589 247 52 46 chr2 115963979 115964542 -137292041 - L1ME1 LINE L1 -5 6161 5596 202 336 36 43 chr2 115966001 115966141 -137290442 + L2 LINE L2 3163 3301 -12 26 30 0 0 chr2 115967322 115967355 -137289228 + AT_rich Low_complexity Low_complexity 1 33 0 2574 263 63 29 chr2 115967597 115967730 -137288853 + L1ME3A LINE L1 4493 4620 -1550 324 0 0 0 chr2 115967730 115967766 -137288817 + (TG)n Simple_repeat Simple_repeat 2 37 0 2574 263 63 29 chr2 115967766 115969232 -137287351 + L1ME3A LINE L1 4620 6148 -22 634 251 17 17 chr2 115969769 115969944 -137286639 - MIR SINE MIR -33 229 55 368 356 56 7 chr2 115971615 115971833 -137284750 + MIR SINE MIR 13 235 -27 309 82 0 0 chr2 115973760 115973809 -137282774 + (TC)n Simple_repeat Simple_repeat 2 50 0 371 315 80 10 chr2 115973956 115974156 -137282427 + MIR SINE MIR 34 247 -15 470 252 50 14 chr2 115974232 115974371 -137282212 - MIR3 SINE MIR -47 161 18 1765 163 0 4 chr2 115974656 115974932 -137281651 + AluJb SINE Alu 36 310 -2 2069 126 3 3 chr2 115975199 115975493 -137281090 + AluSx SINE Alu 1 294 -18 235 272 154 22 chr2 115976184 115976320 -137280263 - MIR SINE MIR -69 193 40 1766 234 47 103 chr2 115976351 115977121 -137279462 + MER21B LTR ERV1 13 739 -124 917 183 24 0 chr2 115977677 115977846 -137278737 - FRAM SINE Alu -10 166 1 548 279 20 0 chr2 115978337 115978484 -137278099 - MIR SINE MIR -57 205 56 493 315 36 6 chr2 115979144 115979309 -137277274 - MIR SINE MIR -69 193 24 252 259 76 69 chr2 115979308 115979439 -137277144 + MIR3 SINE MIR 62 193 -15 * 195 42 0 0 chr2 115979480 115979504 -137277079 + (A)n Simple_repeat Simple_repeat 1 24 0 223 205 301 32 chr2 115980491 115980647 -137275936 + MIR SINE MIR 11 208 -54 685 236 51 88 chr2 115981842 115982194 -137274389 + MER102b DNA MER1_type 1 339 -2 335 250 0 7 chr2 115983256 115983400 -137273183 + (ATGGTG)n Simple_repeat Simple_repeat 4 146 0 327 309 0 0 chr2 115983464 115983642 -137272941 + (TGG)n Simple_repeat Simple_repeat 1 178 0 2487 112 19 27 chr2 115983770 115984137 -137272446 - THE1B LTR MaLR 0 364 1 3224 149 2 0 chr2 115984815 115985291 -137271292 + MER66A LTR ERV1 1 477 -1 333 68 0 0 chr2 115985406 115985450 -137271133 + (TG)n Simple_repeat Simple_repeat 1 44 0 1381 185 180 28 chr2 115985450 115985844 -137270739 - MLT2B1 LTR ERVL -64 456 3 243 294 88 37 chr2 115986169 115986305 -137270278 - L1ME4a LINE L1 -14 6107 5965 322 232 144 16 chr2 115986478 115986603 -137269980 - L2 LINE L2 0 3313 3173 10256 61 9 53 chr2 115988809 115990259 -137266324 + SVA Other Other 1 1386 0 394 191 119 40 chr2 115990605 115990731 -137265852 - Charlie8 DNA MER1_type -2260 157 22 554 327 43 25 chr2 115990829 115991131 -137265452 + L1MC4a LINE L1 5522 5743 -378 2347 107 0 7 chr2 115991131 115991440 -137265143 + AluSx SINE Alu 1 307 -5 554 327 43 25 chr2 115991440 115991517 -137265066 + L1MC4a LINE L1 5743 5817 -304 27 0 0 0 chr2 115992104 115992131 -137264452 + AT_rich Low_complexity Low_complexity 1 27 0 2208 176 8 6 chr2 115992467 115992831 -137263752 + MLT1A1 LTR MaLR 1 365 0 202 314 0 0 chr2 115994160 115994211 -137262372 - L2 LINE L2 0 3272 3222 369 0 0 0 chr2 115994779 115994820 -137261763 + (TG)n Simple_repeat Simple_repeat 2 42 0 268 167 33 17 chr2 115995977 115996037 -137260546 + L2 LINE L2 3197 3257 -56 1943 134 7 17 chr2 115996396 115996686 -137259897 - AluJo SINE Alu -12 300 14 306 300 93 14 chr2 115996907 115997047 -137259536 - MLT1J2 LTR MaLR -24 426 276 1649 193 94 15 chr2 115997641 115998035 -137258548 + MLT1C LTR MaLR 6 430 -37 216 343 91 12 chr2 115998154 115998408 -137258175 + L2 LINE L2 2257 2530 -784 6290 195 60 79 chr2 115998424 116000154 -137256429 + pTR5 LTR ERV1 741 2438 0 2293 120 0 0 chr2 116000739 116001048 -137255535 + AluSx SINE Alu 1 309 -3 2202 236 74 24 chr2 116001651 116002245 -137254338 - MLT1E3 LTR MaLR 0 624 1 3062 101 22 28 chr2 116002608 116002729 -137253854 - L1PB1 LINE L1 -1 6150 6030 2588 51 0 0 chr2 116002729 116003024 -137253559 - AluY SINE Alu -16 295 1 3062 101 22 28 chr2 116003024 116003366 -137253217 - L1PB1 LINE L1 -121 6030 5690 1834 177 53 28 chr2 116003562 116003918 -137252665 + MLT1A1 LTR MaLR 1 365 0 260 262 48 24 chr2 116004400 116004484 -137252099 + MIR SINE MIR 30 115 -147 302 266 47 89 chr2 116005193 116005362 -137251221 + MIR SINE MIR 27 188 -74 1285 242 44 19 chr2 116006712 116007076 -137249507 + MER20B DNA MER1_type 146 518 -265 207 374 137 15 chr2 116007571 116007702 -137248881 + MIR SINE MIR 35 181 -81 347 287 139 9 chr2 116008046 116008161 -137248422 + L2 LINE L2 3143 3272 0 889 158 11 0 chr2 116008164 116008341 -137248242 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 1470 239 62 52 chr2 116009443 116011116 -137245467 + L1MD2 LINE L1 3139 5026 -1120 2118 124 0 17 chr2 116011116 116011445 -137245138 + AluSx SINE Alu 1 324 0 1470 239 62 52 chr2 116011445 116011637 -137244946 + L1MD2 LINE L1 5026 5215 -931 1467 227 105 41 chr2 116011638 116012171 -137244412 - MLT1E3 LTR MaLR 0 624 58 2250 192 53 26 chr2 116012201 116012380 -137244203 + L1MD2 LINE L1 5208 5381 -978 2283 149 95 3 chr2 116012380 116012770 -137243813 + MSTB LTR MaLR 1 426 0 2250 192 53 26 chr2 116012770 116013171 -137243412 + L1MD2 LINE L1 5381 5798 -561 1886 96 27 109 chr2 116013171 116013537 -137243046 - MLT2D LTR ERVL 0 414 79 1137 97 0 7 chr2 116013538 116013683 -137242900 + AluYa5 SINE Alu 1 144 -167 2402 68 14 3 chr2 116013684 116013979 -137242604 + AluY SINE Alu 1 298 -13 518 159 0 0 chr2 116013979 116014067 -137242516 - MLT2D LTR ERVL -325 89 2 1752 189 149 79 chr2 116014067 116014186 -137242397 + L1MD2 LINE L1 5793 5902 -457 2110 128 0 17 chr2 116014186 116014484 -137242099 + AluSx SINE Alu 1 293 -19 1752 189 149 79 chr2 116014484 116014894 -137241689 + L1MD2 LINE L1 5902 6359 0 26 30 0 0 chr2 116015400 116015433 -137241150 + AT_rich Low_complexity Low_complexity 1 33 0 425 224 43 9 chr2 116015988 116016104 -137240479 - L1ME4a LINE L1 -204 5917 5798 279 0 0 0 chr2 116016289 116016320 -137240263 + (CA)n Simple_repeat Simple_repeat 2 32 0 1471 121 213 4 chr2 116016555 116016826 -137239757 + AluYa5 SINE Alu 1 301 0 2270 95 7 7 chr2 116017003 116017307 -137239276 + AluSx SINE Alu 1 304 -8 238 279 16 0 chr2 116017380 116017441 -137239142 - MIR SINE MIR 0 262 201 2201 136 0 0 chr2 116017677 116017985 -137238598 - AluSx SINE Alu -4 308 1 746 260 104 83 chr2 116018074 116018545 -137238038 + MLT1G LTR MaLR 1 480 -115 534 221 28 7 chr2 116018558 116018703 -137237880 + MER69 DNA AcHobo 1896 2043 -483 254 95 24 0 chr2 116019027 116019069 -137237514 + (GA)n Simple_repeat Simple_repeat 1 43 0 2235 127 0 9 chr2 116019946 116020261 -137236322 + AluJo SINE Alu 1 312 0 194 372 0 13 chr2 116020398 116020476 -137236107 + L2 LINE L2 3236 3312 -1 37 23 0 0 chr2 116021680 116021724 -137234859 + AT_rich Low_complexity Low_complexity 1 44 0 1824 152 30 14 chr2 116021729 116022025 -137234558 + AluJb SINE Alu 1 301 -11 2288 108 3 0 chr2 116024258 116024554 -137232029 - AluSx SINE Alu -15 297 1 206 297 144 27 chr2 116024635 116024746 -137231837 - MIR SINE MIR -118 144 21 1185 271 51 25 chr2 116025688 116026197 -137230386 + L1ME4a LINE L1 5551 6072 -49 353 230 105 26 chr2 116028121 116028273 -137228310 + MER103 DNA DNA 2 165 -1 3538 129 103 47 chr2 116028478 116029166 -137227417 + LTR8A LTR ERV1 1 727 0 653 246 66 0 chr2 116030357 116030540 -137226043 - MIR SINE MIR -67 195 1 2000 45 8 0 chr2 116030560 116030807 -137225776 + L1PA5 LINE L1 5906 6154 0 2483 87 0 3 chr2 116030951 116031262 -137225321 + AluSg SINE Alu 1 310 0 321 26 0 0 chr2 116032349 116032387 -137224196 + (TGAA)n Simple_repeat Simple_repeat 1 38 0 1161 103 5 65 chr2 116032483 116032668 -137223915 - AluSg/x SINE Alu -9 301 128 585 309 19 29 chr2 116032811 116033021 -137223562 - MIR SINE MIR -21 241 34 2294 105 0 10 chr2 116035194 116035507 -137221076 - AluY SINE Alu -1 310 1 1904 144 10 7 chr2 116035623 116035921 -137220662 + AluJo SINE Alu 1 299 -13 888 158 0 33 chr2 116036118 116036270 -137220313 - AluJo SINE Alu -165 147 1 306 153 0 0 chr2 116037736 116037795 -137218788 + (TG)n Simple_repeat Simple_repeat 2 60 0 2162 103 0 14 chr2 116038523 116038814 -137217769 - AluSc SINE Alu -22 287 1 249 171 57 29 chr2 116039033 116039103 -137217480 - LTR37B LTR ERV1 -393 75 4 833 236 54 8 chr2 116039843 116040101 -137216482 - LTR37B LTR ERV1 -2 466 197 1968 169 26 0 chr2 116040135 116040437 -137216146 + AluSx SINE Alu 1 310 -2 589 177 0 15 chr2 116040439 116040569 -137216014 + GA-rich Low_complexity Low_complexity 3 130 0 * 692 132 0 8 chr2 116040539 116040660 -137215923 + (GGGGA)n Simple_repeat Simple_repeat 4 123 0 659 199 7 7 chr2 116040731 116040877 -137215706 - LTR37B LTR ERV1 -316 152 7 1380 307 97 30 chr2 116041615 116042568 -137214015 - L2 LINE L2 -1 3312 2290 271 300 0 0 chr2 116043207 116043267 -137213316 + L2 LINE L2 3202 3261 -11 198 0 0 0 chr2 116043424 116043446 -137213137 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 2125 217 76 16 chr2 116045199 116045740 -137210843 + L1ME1 LINE L1 5549 6129 -37 2134 116 23 13 chr2 116045740 116046050 -137210533 - AluSp SINE Alu 0 313 1 2125 217 76 16 chr2 116046050 116046084 -137210499 + L1ME1 LINE L1 6129 6159 -7 187 158 105 0 chr2 116047720 116047758 -137208825 + MIR SINE MIR 103 144 -118 2277 103 0 0 chr2 116048100 116048391 -137208192 + AluSx SINE Alu 1 291 -21 1662 184 21 37 chr2 116048857 116049237 -137207346 - MSTD LTR MaLR -22 374 1 590 274 84 0 chr2 116049253 116049443 -137207140 - MIR SINE MIR -20 242 37 219 36 0 0 chr2 116050148 116050176 -137206407 + (TTGG)n Simple_repeat Simple_repeat 2 29 0 983 178 0 0 chr2 116050178 116050335 -137206248 - FAM SINE Alu -18 157 1 2629 137 26 42 chr2 116050439 116050797 -137205786 + L1MB2 LINE L1 5442 5791 -392 2479 154 19 106 chr2 116050797 116051153 -137205430 - MLT2B1 LTR ERVL -2 518 228 2451 58 3 7 chr2 116051153 116051444 -137205139 - AluY SINE Alu -21 290 1 2479 154 19 106 chr2 116051444 116051653 -137204930 - MLT2B1 LTR ERVL -292 228 2 2629 137 26 42 chr2 116051653 116051799 -137204784 + L1MB2 LINE L1 5791 5938 -245 2880 118 16 36 chr2 116051799 116052415 -137204168 + MER4E LTR ERV1 2 766 0 1452 150 9 0 chr2 116052415 116052648 -137203935 + L1MB2 LINE L1 5934 6168 -3 453 192 48 56 chr2 116053689 116053814 -137202769 - MIR SINE MIR -41 221 98 2503 69 10 0 chr2 116054552 116054855 -137201728 + AluY SINE Alu 1 306 -5 222 261 194 56 chr2 116054951 116055131 -137201452 - MIR SINE MIR 0 262 58 248 350 10 10 chr2 116055544 116055647 -137200936 - MIR3 SINE MIR -17 191 89 491 322 174 35 chr2 116056147 116057098 -137199485 - L2 LINE L2 -10 3262 2121 2229 114 0 3 chr2 116057098 116057395 -137199188 + AluSx SINE Alu 1 296 -16 491 322 174 35 chr2 116057395 116057522 -137199061 - L2 LINE L2 -1151 2121 2013 578 224 126 79 chr2 116057877 116058131 -137198452 - L2 LINE L2 0 3313 3048 2363 121 0 10 chr2 116058975 116059289 -137197294 - AluSx SINE Alu -1 311 1 1926 157 13 0 chr2 116059499 116059776 -137196807 + AluJb SINE Alu 1 273 -39 693 0 0 0 chr2 116059776 116059853 -137196730 + (GAAAA)n Simple_repeat Simple_repeat 3 79 0 1926 157 13 0 chr2 116059853 116059865 -137196718 + AluJb SINE Alu 273 283 -29 225 65 0 0 chr2 116059865 116059896 -137196687 + (CAGG)n Simple_repeat Simple_repeat 4 34 0 1926 157 13 0 chr2 116059896 116059910 -137196673 + AluJb SINE Alu 283 309 -3 408 130 0 0 chr2 116059913 116059982 -137196601 + (GA)n Simple_repeat Simple_repeat 2 70 0 1097 84 11 11 chr2 116059991 116060169 -137196414 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 2264 116 3 6 chr2 116060462 116060773 -137195810 + AluSg SINE Alu 1 310 0 209 137 39 0 chr2 116060912 116060963 -137195620 + CT-rich Low_complexity Low_complexity 4 56 0 2525 84 3 0 chr2 116062089 116062398 -137194185 - AluSp SINE Alu -3 310 1 504 276 37 51 chr2 116063133 116063350 -137193233 - L1MEc LINE L1 -6144 252 39 2416 92 68 0 chr2 116064254 116064592 -137191991 + THE1B LTR MaLR 1 361 -3 22 56 0 0 chr2 116115308 116115344 -137141239 + AT_rich Low_complexity Low_complexity 1 36 0 877 171 5 43 chr2 116115350 116115537 -137141046 + AluJo SINE Alu 17 196 -116 303 272 58 13 chr2 116115537 116115679 -137140904 - L1M4 LINE L1 -747 5399 5249 242 202 39 67 chr2 116115706 116115762 -137140821 - L1M4 LINE L1 -957 5189 5135 2068 80 0 14 chr2 116115762 116116072 -137140511 - AluY SINE Alu 0 306 1 242 202 39 67 chr2 116116072 116116118 -137140465 - L1M4 LINE L1 -1011 5135 5089 319 237 224 39 chr2 116116980 116117136 -137139447 + LTR26B LTR ERV1 1 185 -346 1211 212 61 27 chr2 116117136 116117278 -137139305 + LTR26E LTR ERV1 316 452 -170 2330 91 0 0 chr2 116117278 116117587 -137138996 + AluY SINE Alu 1 309 -2 1211 212 61 27 chr2 116117587 116117741 -137138842 + LTR26E LTR ERV1 452 622 0 2124 95 0 10 chr2 116118086 116118382 -137138201 + AluSx SINE Alu 1 293 -19 2309 70 0 16 chr2 116119728 116120041 -137136542 + AluY SINE Alu 1 308 -3 1034 161 72 0 chr2 116120340 116120520 -137136063 - L1M4 LINE L1 -572 5606 5414 2193 89 0 22 chr2 116120675 116120991 -137135592 + AluSg1 SINE Alu 1 309 0 702 182 0 0 chr2 116121905 116122015 -137134568 - FLAM_C SINE Alu -32 111 2 418 294 136 15 chr2 116122059 116122331 -137134252 - HAL1 LINE L1 -487 2020 1716 231 231 8 60 chr2 116123469 116123586 -137132997 + (CCCCG)n Simple_repeat Simple_repeat 2 112 0 2272 64 0 3 chr2 116124498 116124795 -137131788 - AluSc SINE Alu -13 296 1 1268 126 0 0 chr2 116125500 116125682 -137130901 - AluJb SINE Alu -3 309 128 1950 134 0 0 chr2 116125779 116126069 -137130514 - AluSx SINE Alu -22 290 1 997 96 0 0 chr2 116128130 116128265 -137128318 + AluSc SINE Alu 160 294 -15 824 276 114 13 chr2 116128565 116128880 -137127703 - L2 LINE L2 -2561 753 407 1970 108 42 7 chr2 116128967 116129253 -137127330 - AluSx SINE Alu -16 296 1 1377 203 122 29 chr2 116129973 116130318 -137126265 + MLT1G LTR MaLR 7 383 -207 380 179 115 0 chr2 116130319 116130397 -137126186 - MER58B DNA MER1_type -2 339 253 594 250 51 34 chr2 116130479 116130655 -137125928 + MLT1G LTR MaLR 409 587 -3 549 272 51 6 chr2 116130665 116130823 -137125760 - L2 LINE L2 -260 3053 2889 738 253 59 114 chr2 116130826 116131197 -137125386 + REP3 LTR ERV 1 334 -228 270 0 0 0 chr2 116131197 116131227 -137125356 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 738 253 59 114 chr2 116131227 116131400 -137125183 + REP3 LTR ERV 334 515 -47 546 187 49 86 chr2 116131429 116131638 -137124945 - L2 LINE L2 -379 2893 2691 1645 167 38 7 chr2 116132402 116132690 -137123893 + L1MC3 LINE L1 7127 7423 -362 840 183 14 0 chr2 116132695 116132837 -137123746 + FRAM SINE Alu 11 154 -22 822 123 29 71 chr2 116132837 116133007 -137123576 + L1MC3 LINE L1 7590 7752 -33 7444 23 7 1 chr2 116133009 116133864 -137122719 - L1PA3 LINE L1 -8 6147 5288 2183 80 0 0 chr2 116133879 116134166 -137122417 + AluSg SINE Alu 1 287 -23 354 23 0 0 chr2 116134166 116134209 -137122374 + (CA)n Simple_repeat Simple_repeat 2 44 0 1654 118 37 40 chr2 116134289 116134586 -137121997 - AluJo SINE Alu -8 304 9 419 352 47 10 chr2 116135123 116135316 -137121267 - MIR SINE MIR -12 250 51 2163 78 10 7 chr2 116135322 116135618 -137120965 - AluSq SINE Alu -16 297 1 423 136 284 0 chr2 116135721 116135809 -137120774 - MER46A DNA MER2_type 0 236 124 5385 166 46 12 chr2 116135810 116137383 -137119200 - L1PB3 LINE L1 -18 6136 4523 252 167 0 0 chr2 116137643 116137691 -137118892 + CT-rich Low_complexity Low_complexity 3 50 0 687 35 12 0 chr2 116137748 116137833 -137118750 + AluY SINE Alu 214 299 -12 1977 108 14 3 chr2 116137849 116138135 -137118448 + AluSx SINE Alu 7 295 -17 3286 121 22 10 chr2 116138559 116139062 -137117521 + MER9 LTR ERVK 3 511 0 2058 130 3 0 chr2 116139076 116139375 -137117208 - AluJb SINE Alu -12 300 1 2004 119 3 13 chr2 116139977 116140279 -137116304 - AluSx SINE Alu -13 299 1 1974 126 0 13 chr2 116140289 116140590 -137115993 - AluSc SINE Alu -12 297 1 1788 86 4 8 chr2 116141535 116141778 -137114805 - AluSx SINE Alu -70 242 1 1646 174 33 0 chr2 116141778 116142077 -137114506 - AluJo SINE Alu -3 309 1 225 0 0 0 chr2 116142086 116142111 -137114472 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 1958 113 0 21 chr2 116142111 116142395 -137114188 - AluSg SINE Alu -32 278 1 321 203 29 0 chr2 116142395 116142464 -137114119 - L1MC/D LINE L1 -2044 5764 5694 287 306 41 0 chr2 116142480 116142578 -137114005 - L1ME2 LINE L1 -11 6153 6052 315 317 0 29 chr2 116143000 116143104 -137113479 + MIR SINE MIR 73 173 -89 260 217 0 0 chr2 116143233 116143279 -137113304 - MER21B LTR ERV1 -805 58 13 3087 210 96 128 chr2 116143279 116143623 -137112960 - L1M4 LINE L1 -1550 4596 4243 2211 121 0 16 chr2 116143623 116143937 -137112646 - AluSx SINE Alu -3 309 1 3087 210 96 128 chr2 116143937 116144182 -137112401 - L1M4 LINE L1 -1903 4243 3992 1331 116 10 5 chr2 116144182 116144359 -137112224 - AluSg/x SINE Alu 0 312 132 2168 120 0 3 chr2 116144359 116144667 -137111916 - AluSx SINE Alu -5 307 1 1331 116 10 5 chr2 116144667 116144687 -137111896 - AluSg/x SINE Alu -180 132 114 3087 210 96 128 chr2 116144687 116145726 -137110857 - L1M4 LINE L1 -2154 3992 2838 1976 120 7 7 chr2 116145726 116146002 -137110581 + AluSq SINE Alu 25 300 -13 3087 210 96 128 chr2 116146002 116146196 -137110387 - L1M4 LINE L1 -3308 2838 2639 927 159 0 66 chr2 116146198 116146380 -137110203 - AluSg/x SINE Alu -6 304 135 313 202 128 11 chr2 116146407 116146501 -137110082 - L1MDa LINE L1 -4983 1557 1453 365 346 0 10 chr2 116147139 116147243 -137109340 - L2 LINE L2 -32 3240 3138 23 54 0 0 chr2 116147245 116147282 -137109301 + AT_rich Low_complexity Low_complexity 1 37 0 421 215 54 0 chr2 116147533 116147663 -137108920 + L1MB7 LINE L1 4822 4958 -1188 3088 156 24 62 chr2 116147674 116148371 -137108212 + L1MB7 LINE L1 5489 6159 -25 2262 130 0 0 chr2 116148493 116148801 -137107782 + AluSx SINE Alu 1 308 -4 1047 204 55 5 chr2 116148873 116149093 -137107490 + LTR28-int LTR ERV1 198 428 -6663 2556 308 41 49 chr2 116149411 116150691 -137105892 + LTR28-int LTR ERV1 1492 2760 -4331 7572 195 9 23 chr2 116150804 116152310 -137104273 + LTR28-int LTR ERV1 2748 4233 -2858 1798 100 30 36 chr2 116152467 116152768 -137103815 + LTR28-int LTR ERV1 6793 7091 0 1210 228 114 12 chr2 116152768 116153160 -137103423 + LTR28 LTR ERV1 1 439 -197 180 0 0 0 chr2 116153163 116153183 -137103400 + (A)n Simple_repeat Simple_repeat 1 20 0 430 301 18 72 chr2 116153186 116153352 -137103231 - L2 LINE L2 -556 2758 2602 1085 152 38 0 chr2 116154126 116154310 -137102273 + AluSg/x SINE Alu 120 310 0 180 111 0 0 chr2 116154352 116154379 -137102204 + (TC)n Simple_repeat Simple_repeat 2 28 0 23 33 0 0 chr2 116154671 116154701 -137101882 + AT_rich Low_complexity Low_complexity 1 30 0 304 236 166 9 chr2 116155991 116156200 -137100383 + L1MC/D LINE L1 5567 5822 -299 35 71 0 0 chr2 116156286 116156356 -137100227 + AT_rich Low_complexity Low_complexity 1 70 0 22 80 0 0 chr2 116156507 116156557 -137100026 + AT_rich Low_complexity Low_complexity 1 50 0 667 191 32 0 chr2 116158049 116158206 -137098377 - MER104 DNA Tc2 -12 168 7 599 245 175 20 chr2 116158216 116158456 -137098127 - MIR SINE MIR 0 262 5 747 75 0 9 chr2 116159660 116159766 -137096817 + AluSq/x SINE Alu 1 105 -207 636 250 110 83 chr2 116160773 116161003 -137095580 + L1ME1 LINE L1 5272 5494 -668 2527 50 0 25 chr2 116161003 116161322 -137095261 - AluY SINE Alu 0 311 1 636 250 110 83 chr2 116161322 116161686 -137094897 + L1ME1 LINE L1 5494 5884 -278 926 195 138 14 chr2 116163323 116163533 -137093050 + MER8 DNA MER2_type 1 236 -3 1856 163 0 36 chr2 116163886 116164193 -137092390 - AluJo SINE Alu -16 296 1 777 229 30 0 chr2 116164226 116164427 -137092156 - L1ME1 LINE L1 -23 6143 5937 1535 146 8 24 chr2 116164950 116165204 -137091379 + AluJb SINE Alu 60 309 -3 36 23 0 0 chr2 116165271 116165314 -137091269 + AT_rich Low_complexity Low_complexity 1 43 0 3892 165 29 51 chr2 116165423 116166354 -137090229 + L1MB4 LINE L1 5200 6117 -63 2203 88 11 0 chr2 116166354 116166639 -137089944 + AluSx SINE Alu 1 288 -24 3892 165 29 51 chr2 116166639 116166702 -137089881 + L1MB4 LINE L1 6117 6180 0 23 0 0 0 chr2 116167111 116167134 -137089449 + AT_rich Low_complexity Low_complexity 1 23 0 2189 118 3 3 chr2 116167209 116167513 -137089070 + AluSx SINE Alu 1 304 -8 1331 225 98 19 chr2 116167531 116168060 -137088523 + L1MD1 LINE L1 4696 5266 -880 1747 224 31 4 chr2 116168067 116168518 -137088065 + L1MD1 LINE L1 5397 5859 -383 414 214 31 10 chr2 116168523 116168621 -137087962 + L1ME1 LINE L1 6017 6116 -50 332 293 107 14 chr2 116169464 116169604 -137086979 + MIR SINE MIR 54 206 -56 2008 106 35 3 chr2 116170384 116170668 -137085915 + AluSg SINE Alu 1 293 -17 410 239 63 0 chr2 116170671 116170813 -137085770 + L1ME2 LINE L1 6014 6164 0 2155 115 0 3 chr2 116170846 116171141 -137085442 + AluSq SINE Alu 1 294 -19 272 250 56 56 chr2 116171676 116171784 -137084799 + MIR SINE MIR 119 226 -36 687 249 129 42 chr2 116171991 116172401 -137084182 + MLT1J1 LTR MaLR 1 446 0 225 300 118 27 chr2 116173016 116173126 -137083457 + L2 LINE L2 3172 3291 -22 1954 168 0 0 chr2 116173805 116174108 -137082475 + AluSx SINE Alu 1 303 -9 1058 274 104 30 chr2 116174222 116174838 -137081745 - L2 LINE L2 -3 3310 2650 2487 77 0 0 chr2 116175406 116175706 -137080877 + AluY SINE Alu 1 300 -11 916 113 8 0 chr2 116176866 116176999 -137079584 - AluSg/x SINE Alu -10 302 169 2336 110 0 0 chr2 116177163 116177462 -137079121 + AluSq SINE Alu 1 299 -14 1574 194 3 11 chr2 116177741 116178025 -137078558 - AluJo SINE Alu -30 282 1 22 70 0 0 chr2 116178469 116178512 -137078071 + AT_rich Low_complexity Low_complexity 1 43 0 2594 33 0 7 chr2 116178569 116178872 -137077711 + AluY SINE Alu 1 301 -10 22 0 0 0 chr2 116179270 116179292 -137077291 + AT_rich Low_complexity Low_complexity 1 22 0 2068 163 0 0 chr2 116179432 116179738 -137076845 - AluSx SINE Alu -5 307 2 807 200 71 13 chr2 116180869 116181024 -137075559 + FAM SINE Alu 1 164 -21 2251 107 0 10 chr2 116181361 116181660 -137074923 + AluSx SINE Alu 1 296 -16 1329 99 0 6 chr2 116182712 116182884 -137073699 + AluSp SINE Alu 122 292 -21 2828 183 30 2 chr2 116182884 116183479 -137073104 - L1 LINE L1 -1764 4382 3771 757 161 54 0 chr2 116183481 116183611 -137072972 - MER46A DNA MER2_type -99 137 1 33 0 0 0 chr2 116185023 116185056 -137071527 + AT_rich Low_complexity Low_complexity 1 33 0 2720 164 24 29 chr2 116185362 116185952 -137070631 - L1MB4 LINE L1 0 6180 5594 758 216 7 7 chr2 116185959 116186107 -137070476 - FRAM SINE Alu -30 146 1 1559 145 77 7 chr2 116186110 116186420 -137070163 - L1MB4 LINE L1 -576 5604 5273 200 309 157 54 chr2 116186606 116186995 -137069588 + L2 LINE L2 2549 2977 -337 180 327 218 0 chr2 116187122 116187232 -137069351 + L2 LINE L2 3171 3304 -9 851 143 8 8 chr2 116187232 116187365 -137069218 + FLAM_C SINE Alu 1 133 -10 519 218 113 90 chr2 116188031 116188508 -137068075 - L1MC4 LINE L1 0 8042 7555 294 153 118 12 chr2 116188530 116188615 -137067968 - L1MC5 LINE L1 -36 7925 7832 2237 97 0 26 chr2 116188619 116188930 -137067653 + AluY SINE Alu 1 303 -8 335 370 19 0 chr2 116189055 116189271 -137067312 - L1MC4a LINE L1 -412 7396 7177 239 280 60 20 chr2 116189424 116189524 -137067059 - L1MC5 LINE L1 -897 7064 6961 29 0 0 0 chr2 116189725 116189754 -137066829 + AT_rich Low_complexity Low_complexity 1 29 0 2333 98 0 3 chr2 116190693 116190990 -137065593 + AluSp SINE Alu 2 297 -16 2199 93 6 13 chr2 116191195 116191507 -137065076 + AluSp SINE Alu 1 310 -3 3467 191 166 63 chr2 116191622 116192738 -137063845 - L1MDa LINE L1 -5173 1367 368 2429 75 0 0 chr2 116192738 116193032 -137063551 + AluSc SINE Alu 1 294 -15 1102 139 57 30 chr2 116193036 116193266 -137063317 - L1MB3 LINE L1 -16 6167 5932 3467 191 166 63 chr2 116193266 116193353 -137063230 - L1MDa LINE L1 -6174 366 34 180 273 76 30 chr2 116193883 116193949 -137062634 - MIR SINE MIR 0 262 194 298 323 15 15 chr2 116194141 116194271 -137062312 - MIR SINE MIR -57 151 22 470 280 25 25 chr2 116194456 116194613 -137061970 + MER5B DNA MER1_type 13 169 -9 255 140 0 0 chr2 116194900 116194950 -137061633 + (T)n Simple_repeat Simple_repeat 1 50 0 326 277 107 0 chr2 116195101 116195213 -137061370 + LTR33 LTR ERVL 16 139 -382 279 213 0 0 chr2 116195262 116195323 -137061260 + MER53 DNA DNA 129 189 0 207 0 0 0 chr2 116195779 116195802 -137060781 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2171 92 0 7 chr2 116195805 116196089 -137060494 - AluSx SINE Alu -30 282 1 1855 124 0 11 chr2 116196386 116196651 -137059932 + AluSx SINE Alu 36 297 -15 724 133 102 0 chr2 116196885 116197013 -137059570 - FLAM_C SINE Alu -1 142 2 304 276 16 24 chr2 116197582 116197705 -137058878 - MER117 DNA MER1_type 0 197 76 279 214 34 79 chr2 116199135 116199224 -137057359 - MER91C DNA MER1_type -24 116 32 274 261 210 0 chr2 116199338 116199457 -137057126 - MIR SINE MIR 0 262 119 201 324 15 0 chr2 116199998 116200066 -137056517 - L2 LINE L2 0 3272 3204 1970 114 0 47 chr2 116200508 116200806 -137055777 - AluSx SINE Alu -28 284 1 1515 110 57 64 chr2 116201132 116201396 -137055187 + 7SLRNA srpRNA srpRNA 59 320 0 2081 89 0 0 chr2 116202355 116202613 -137053970 + AluSc SINE Alu 45 302 -7 2517 62 0 0 chr2 116203095 116203386 -137053197 - AluY SINE Alu -20 291 1 3072 115 38 2 chr2 116203520 116203989 -137052594 - LTR19A LTR ERV1 0 486 1 7041 65 15 0 chr2 116204628 116205770 -137050813 - L1PA7 LINE L1 -2 6152 5007 432 0 0 0 chr2 116206544 116206592 -137049991 + (TG)n Simple_repeat Simple_repeat 2 49 0 241 219 0 0 chr2 116206599 116206663 -137049920 - L1ME4a LINE L1 -11 6110 6047 23 0 0 0 chr2 116206701 116206724 -137049859 + AT_rich Low_complexity Low_complexity 1 23 0 2262 109 0 0 chr2 116206826 116207120 -137049463 - AluY SINE Alu -16 295 2 35 54 0 0 chr2 116207299 116207355 -137049228 + AT_rich Low_complexity Low_complexity 1 56 0 1560 169 40 25 chr2 116208068 116208371 -137048212 + AluJo SINE Alu 1 307 0 562 131 77 77 chr2 116208808 116208938 -137047645 - L1MB3 LINE L1 0 6183 6054 1672 151 45 0 chr2 116208970 116209146 -137047437 - AluJb SINE Alu 0 312 119 184 30 61 0 chr2 116209146 116209179 -137047404 + (TTTG)n Simple_repeat Simple_repeat 4 38 0 1672 151 45 0 chr2 116209179 116209267 -137047316 - AluJb SINE Alu -193 119 36 391 154 0 0 chr2 116209267 116209332 -137047251 - L1MB3 LINE L1 -204 5967 5903 328 225 34 22 chr2 116209468 116209557 -137047026 - MER20B DNA MER1_type -401 382 293 500 200 26 0 chr2 116209615 116209730 -137046853 - MER20B DNA MER1_type -665 118 1 2251 116 0 16 chr2 116209762 116210072 -137046511 + AluSx SINE Alu 1 305 -7 281 92 0 255 chr2 116210092 116210190 -137046393 - MLT2D LTR ERVL 0 464 392 1978 182 20 3 chr2 116210670 116211021 -137045562 - MLT2D LTR ERVL -57 357 1 2148 89 14 7 chr2 116213146 116213426 -137043157 + AluSx SINE Alu 1 282 -30 1003 308 134 43 chr2 116214207 116215519 -137041064 + L2 LINE L2 1852 3300 -13 384 241 0 0 chr2 116215739 116215826 -137040757 - L1ME3 LINE L1 -2 6160 6074 235 222 74 0 chr2 116215826 116215880 -137040703 - MER3 DNA MER1_type -137 72 15 2666 178 30 79 chr2 116215880 116216089 -137040494 - L1ME2 LINE L1 -146 6018 5800 2050 133 7 0 chr2 116216089 116216389 -137040194 - AluSx SINE Alu -10 302 1 2666 178 30 79 chr2 116216389 116216916 -137039667 - L1ME2 LINE L1 -364 5800 5318 2459 59 23 3 chr2 116217130 116217435 -137039148 - AluY SINE Alu 0 311 1 1886 139 31 10 chr2 116218206 116218494 -137038089 + AluSx SINE Alu 1 294 -18 3305 144 119 143 chr2 116218500 116218823 -137037760 - L1MC3 LINE L1 -20 7765 7436 7861 75 3 1 chr2 116218823 116219790 -137036793 - LTR5 LTR ERVK 0 969 1 3305 144 119 143 chr2 116219790 116220043 -137036540 - L1MC3 LINE L1 -349 7436 7178 351 247 43 0 chr2 116220043 116220136 -137036447 - MLT1F1 LTR MaLR -442 125 29 3305 144 119 143 chr2 116220136 116220542 -137036041 - L1MC3 LINE L1 -607 7178 6716 23 33 0 0 chr2 116220556 116220586 -137035997 + AT_rich Low_complexity Low_complexity 1 30 0 613 239 78 23 chr2 116221311 116221529 -137035054 + MIR SINE MIR 23 252 -10 296 265 15 68 chr2 116222940 116223072 -137033511 - MIR SINE MIR -72 190 66 482 279 105 18 chr2 116223143 116223362 -137033221 + MIR SINE MIR 17 254 -8 203 262 0 0 chr2 116223606 116223648 -137032935 + (CA)n Simple_repeat Simple_repeat 2 43 0 239 222 51 86 chr2 116223706 116223823 -137032760 + L2 LINE L2 3140 3252 -20 225 65 0 0 chr2 116224072 116224103 -137032480 + (TG)n Simple_repeat Simple_repeat 2 32 0 2192 97 16 42 chr2 116224616 116224927 -137031656 - AluSp SINE Alu -10 303 1 206 235 98 0 chr2 116225349 116225400 -137031183 - MIR SINE MIR -174 88 33 2642 49 0 0 chr2 116225784 116226089 -137030494 - AluY SINE Alu -6 305 1 305 120 0 0 chr2 116226255 116226305 -137030278 - AluSq SINE Alu -2 298 249 2037 156 10 0 chr2 116227203 116227511 -137029072 - AluJb SINE Alu -1 311 1 32 44 0 29 chr2 116227517 116227545 -137029038 + AT_rich Low_complexity Low_complexity 1 28 -38 2308 101 3 3 chr2 116227545 116227841 -137028742 - AluSp SINE Alu -17 296 1 32 44 0 29 chr2 116227841 116227880 -137028703 + AT_rich Low_complexity Low_complexity 28 66 0 472 235 206 18 chr2 116228016 116228344 -137028239 + L2 LINE L2 2664 3060 -253 285 98 0 0 chr2 116228423 116228464 -137028119 + (TTCC)n Simple_repeat Simple_repeat 4 44 0 1928 105 0 0 chr2 116228487 116228735 -137027848 - AluSq SINE Alu -65 248 1 26 0 0 0 chr2 116229962 116229988 -137026595 + AT_rich Low_complexity Low_complexity 1 26 0 2268 91 3 3 chr2 116230033 116230330 -137026253 - AluSg SINE Alu -13 297 1 2124 98 0 89 chr2 116231087 116231425 -137025158 - AluSx SINE Alu -4 308 1 217 367 36 7 chr2 116232454 116232593 -137023990 + MIR3 SINE MIR 35 177 -31 2267 93 7 3 chr2 116232789 116233079 -137023504 + AluSq SINE Alu 1 291 -22 392 309 82 35 chr2 116234260 116234516 -137022067 - MLT1J LTR MaLR -14 497 230 3177 123 12 19 chr2 116234563 116234854 -137021729 + L1MA5A LINE L1 5277 5564 -733 4855 88 18 5 chr2 116234854 116235505 -137021078 + PABL_A LTR ERV1 1 660 0 3177 123 12 19 chr2 116235505 116235726 -137020857 + L1MA5A LINE L1 5564 5785 -512 1160 199 0 0 chr2 116235726 116235922 -137020661 + AluJo SINE Alu 87 282 -30 2310 106 0 0 chr2 116235924 116236227 -137020356 - AluSq SINE Alu -10 303 1 180 0 0 0 chr2 116236249 116236269 -137020314 + (TG)n Simple_repeat Simple_repeat 2 21 0 1995 125 14 36 chr2 116236269 116236622 -137019961 + L1MA5A LINE L1 5775 6121 -176 318 106 0 0 chr2 116237132 116237179 -137019404 + (TCC)n Simple_repeat Simple_repeat 1 47 0 3413 239 53 9 chr2 116237179 116238290 -137018293 - L1M4 LINE L1 -2528 3618 2459 1370 147 0 0 chr2 116238324 116238549 -137018034 - AluSq SINE Alu 0 310 86 417 168 0 25 chr2 116238991 116239136 -137017447 + MER53 DNA DNA 1 189 0 180 0 0 0 chr2 116240295 116240315 -137016268 + (A)n Simple_repeat Simple_repeat 1 20 0 1668 134 57 50 chr2 116240414 116240697 -137015886 + AluSx SINE Alu 5 289 -23 22 35 0 0 chr2 116240701 116240730 -137015853 + AT_rich Low_complexity Low_complexity 1 29 0 219 176 0 39 chr2 116240772 116240792 -137015791 + GA-rich Low_complexity Low_complexity 4 23 -29 2293 116 3 0 chr2 116240792 116241103 -137015480 + AluSq SINE Alu 2 313 0 219 176 0 39 chr2 116241103 116241133 -137015450 + GA-rich Low_complexity Low_complexity 23 52 0 273 263 0 13 chr2 116241148 116241224 -137015359 - MER58 DNA MER1_type 0 2420 2346 2377 152 65 77 chr2 116242074 116242581 -137014002 - MER21A LTR ERV1 -55 876 376 1543 123 11 45 chr2 116242586 116242826 -137013757 - MER21A LTR ERV1 -667 264 32 441 0 0 0 chr2 116242826 116242875 -137013708 + (TG)n Simple_repeat Simple_repeat 2 50 0 1543 123 11 45 chr2 116242875 116242903 -137013680 - MER21A LTR ERV1 -899 32 5 3112 243 72 64 chr2 116242930 116244250 -137012333 - L1MEc LINE L1 -4125 2271 963 1346 140 54 128 chr2 116244250 116244441 -137012142 - AluJo SINE Alu -2 310 106 2255 114 16 0 chr2 116244441 116244747 -137011836 - AluSp SINE Alu -1 312 2 248 0 31 0 chr2 116244748 116244780 -137011803 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1346 140 54 128 chr2 116244780 116244921 -137011662 - AluJo SINE Alu -205 107 1 3112 243 72 64 chr2 116244921 116245392 -137011191 - L1MEc LINE L1 -5433 963 467 2098 264 131 56 chr2 116245444 116246715 -137009868 - HAL1 LINE L1 -767 1740 354 2613 49 0 0 chr2 116246715 116247021 -137009562 - AluY SINE Alu -4 307 2 2098 264 131 56 chr2 116247021 116247144 -137009439 - HAL1 LINE L1 -2153 354 242 652 178 0 0 chr2 116247589 116247690 -137008893 - AluSg/x SINE Alu -9 303 203 230 340 21 31 chr2 116247762 116247859 -137008724 - L1MC/D LINE L1 -2153 5655 5560 252 0 0 0 chr2 116247916 116247944 -137008639 + (CA)n Simple_repeat Simple_repeat 2 29 0 1762 172 17 7 chr2 116248232 116248534 -137008049 - AluJb SINE Alu -7 305 1 857 185 86 59 chr2 116248557 116248779 -137007804 - AluJo SINE Alu -1 311 84 201 175 0 0 chr2 116249377 116249417 -137007166 + (TTCA)n Simple_repeat Simple_repeat 4 43 0 2257 181 108 29 chr2 116250107 116250589 -137005994 - MLT2B1 LTR ERVL 0 520 1 2490 91 71 3 chr2 116251693 116252032 -137004551 - THE1B LTR MaLR 0 364 3 433 281 58 0 chr2 116253863 116254002 -137002581 - MER103 DNA DNA 0 166 20 759 105 0 0 chr2 116254167 116254262 -137002321 - AluSg/x SINE Alu -12 298 204 432 297 117 22 chr2 116254753 116254841 -137001742 - MIR SINE MIR 0 262 184 2185 103 0 10 chr2 116254841 116255131 -137001452 + AluSx SINE Alu 1 287 -25 432 297 117 22 chr2 116255131 116255264 -137001319 - MIR SINE MIR -78 184 20 472 262 169 6 chr2 116255444 116255627 -137000956 + MIR SINE MIR 50 262 0 1545 179 4 4 chr2 116256601 116256858 -136999725 - AluJb SINE Alu -16 296 40 2269 73 3 20 chr2 116257019 116257320 -136999263 + AluY SINE Alu 1 296 -15 922 292 29 36 chr2 116257605 116258019 -136998564 + L1MDa LINE L1 27 437 -6103 419 239 9 0 chr2 116258029 116258138 -136998445 - L1MEc LINE L1 -2139 4007 3898 778 233 55 0 chr2 116258142 116258305 -136998278 + MER58C DNA MER1_type 5 176 -39 844 170 16 44 chr2 116258322 116258504 -136998079 + AluJb SINE Alu 129 305 -7 256 224 0 0 chr2 116258517 116258575 -136998008 + L1M4 LINE L1 2604 2661 -3485 * 592 252 117 18 chr2 116258558 116258879 -136997704 - L1MEc LINE L1 -3696 2450 2110 11408 114 38 32 chr2 116258879 116259213 -136997370 - Tigger1 DNA MER2_type -587 1831 1501 2453 71 0 0 chr2 116259213 116259509 -136997074 - AluY SINE Alu -15 296 1 11408 114 38 32 chr2 116259509 116260990 -136995593 - Tigger1 DNA MER2_type -917 1501 5 354 210 89 51 chr2 116260995 116261152 -136995431 + L1ME3A LINE L1 5789 5951 -219 2472 56 0 0 chr2 116261448 116261736 -136994847 + AluY SINE Alu 1 288 -23 1612 230 122 4 chr2 116262392 116262875 -136993708 + L1MD2 LINE L1 5811 6350 -9 * 2877 224 50 31 chr2 116262870 116263710 -136992873 + L1MB7 LINE L1 5316 6171 -13 183 156 0 0 chr2 116263719 116263751 -136992832 + A-rich Low_complexity Low_complexity 1 32 0 2461 71 0 7 chr2 116263973 116264281 -136992302 + AluY SINE Alu 1 306 -5 2167 66 44 0 chr2 116264695 116264994 -136991589 + AluSp SINE Alu 1 311 0 1800 182 0 16 chr2 116265510 116265817 -136990766 + AluJb SINE Alu 1 302 -10 320 311 143 26 chr2 116265862 116266289 -136990294 + L2 LINE L2 1699 2175 -1139 1875 153 11 0 chr2 116266577 116266864 -136989719 - AluSx SINE Alu -17 295 6 2110 122 17 0 chr2 116267410 116267698 -136988885 - AluSx SINE Alu -19 293 1 2093 116 14 7 chr2 116268667 116268959 -136987624 - AluSx SINE Alu -18 294 1 364 241 187 5 chr2 116269764 116269967 -136986616 - L1ME4a LINE L1 -77 6044 5805 2279 81 7 0 chr2 116270121 116270416 -136986167 + AluY SINE Alu 1 297 -14 2195 108 10 3 chr2 116270640 116270945 -136985638 + AluSx SINE Alu 1 307 -5 651 197 104 83 chr2 116271090 116271210 -136985373 - MER58C DNA MER1_type -2217 203 76 2282 104 7 0 chr2 116271210 116271509 -136985074 + AluSq SINE Alu 5 305 -8 651 197 104 83 chr2 116271509 116271581 -136985002 - MER58C DNA MER1_type -2344 76 7 2177 112 3 3 chr2 116271605 116271901 -136984682 + AluSx SINE Alu 1 296 -16 2529 159 26 15 chr2 116272014 116272222 -136984361 - L1MA9 LINE L1 -314 5998 5794 234 0 0 0 chr2 116272222 116272248 -136984335 + (TA)n Simple_repeat Simple_repeat 2 27 0 2529 159 26 15 chr2 116272248 116272504 -136984079 - L1MA9 LINE L1 -518 5794 5529 210 430 54 0 chr2 116272611 116272760 -136983823 - L3 LINE CR1 -1384 193 37 394 133 0 17 chr2 116273372 116273432 -136983151 - U6 snRNA snRNA -48 59 1 238 220 132 11 chr2 116273438 116273529 -136983054 - L1ME4a LINE L1 -460 5661 5560 191 324 62 98 chr2 116274191 116274271 -136982312 + L2 LINE L2 2435 2516 -798 2145 122 3 3 chr2 116274271 116274575 -136982008 - AluSx SINE Alu -8 304 1 191 324 62 98 chr2 116274575 116274800 -136981783 + L2 LINE L2 2516 2729 -585 261 274 119 0 chr2 116275160 116275244 -136981339 + L2 LINE L2 3178 3271 -1 21 36 0 0 chr2 116275334 116275362 -136981221 + AT_rich Low_complexity Low_complexity 1 28 0 29 0 0 0 chr2 116275606 116275635 -136980948 + AT_rich Low_complexity Low_complexity 1 29 0 1508 201 99 56 chr2 116275977 116276468 -136980115 + L1MD2 LINE L1 5835 6347 -12 2123 41 8 0 chr2 116276584 116276826 -136979757 + L1PA5 LINE L1 5909 6152 -2 410 265 144 8 chr2 116276865 116276997 -136979586 + MIR SINE MIR 68 217 -45 842 207 62 10 chr2 116277358 116277566 -136979017 - AluJo SINE Alu -10 302 84 2170 76 69 0 chr2 116277629 116277919 -136978664 - AluY SINE Alu 0 311 2 841 271 63 72 chr2 116277923 116278433 -136978150 + L2 LINE L2 2652 3312 -1 249 289 21 82 chr2 116279926 116280120 -136976463 + Charlie2 DNA MER1_type 80 261 -2521 274 61 41 0 chr2 116280149 116280198 -136976385 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 1480 156 59 76 chr2 116280207 116280495 -136976088 - AluJb SINE Alu -19 283 1 531 167 65 0 chr2 116280495 116280603 -136975980 - Charlie1 DNA MER1_type -24 2737 2623 * 859 236 17 79 chr2 116280600 116280841 -136975742 - Charlie1 DNA MER1_type -2535 226 1 2418 89 0 9 chr2 116280898 116281213 -136975370 + AluSx SINE Alu 1 312 0 413 194 352 5 chr2 116281233 116281449 -136975134 + Charlie2 DNA MER1_type 2246 2536 -326 399 262 40 13 chr2 116281502 116281651 -136974932 + Charlie2 DNA MER1_type 2706 2858 -4 1000 187 150 0 chr2 116331714 116332082 -136924501 + L1ME LINE L1 5089 5498 -668 232 300 60 45 chr2 116332081 116332281 -136924302 + L1M4 LINE L1 4750 4952 -1194 * 363 214 165 91 chr2 116332405 116332690 -136923893 + MLT1H LTR MaLR 77 382 -167 477 276 65 29 chr2 116333166 116333336 -136923247 + MIR SINE MIR 87 262 0 2333 88 0 3 chr2 116333429 116333737 -136922846 + AluSc SINE Alu 1 307 -2 599 241 42 0 chr2 116334914 116335070 -136921513 - MIR SINE MIR -52 210 50 2050 128 10 3 chr2 116335205 116335501 -136921082 - AluSx SINE Alu -14 298 1 4608 210 80 28 chr2 116335502 116336185 -136920398 - L1M4 LINE L1 -1226 4920 4274 2199 92 0 3 chr2 116336185 116336479 -136920104 - AluSq SINE Alu -20 293 1 4608 210 80 28 chr2 116336479 116337116 -136919467 - L1M4 LINE L1 -1872 4274 3508 2441 70 0 7 chr2 116337116 116337415 -136919168 - AluY SINE Alu -14 297 1 4608 210 80 28 chr2 116337415 116337610 -136918973 - L1M4 LINE L1 -2638 3508 3325 2297 113 0 0 chr2 116337625 116337918 -136918665 - AluSx SINE Alu -15 297 5 2032 122 4 0 chr2 116337918 116338187 -136918396 - AluSq SINE Alu -41 272 1 1152 152 0 0 chr2 116338236 116338400 -136918183 - AluJo SINE Alu -22 290 127 793 176 120 0 chr2 116338552 116338785 -136917798 + L1M4 LINE L1 4256 4516 -1630 * 1296 196 111 32 chr2 116338778 116339182 -136917401 - L1ME2 LINE L1 -50 6114 5679 309 318 143 0 chr2 116339355 116339509 -136917074 - L1M4 LINE L1 -2166 3980 3805 1926 122 14 17 chr2 116339575 116339862 -136916721 - AluSx SINE Alu -26 286 1 1333 192 27 47 chr2 116339988 116340490 -136916093 - L1M4 LINE L1 -430 6016 1424 520 162 20 20 chr2 116340539 116340638 -136915945 - Tigger6 DNA MER2_type -983 100 2 950 267 98 35 chr2 116340643 116341168 -136915415 - L1M4c LINE L1 -4490 2073 1367 240 179 0 95 chr2 116341178 116341205 -136915378 - L1M4 LINE L1 -5947 469 441 2274 98 3 16 chr2 116341205 116341511 -136915072 - AluSx SINE Alu -10 302 1 240 179 0 95 chr2 116341511 116341567 -136915016 - L1M4 LINE L1 -5975 441 394 390 278 12 43 chr2 116343894 116344056 -136912527 - L1ME3A LINE L1 -83 6087 5931 520 256 117 22 chr2 116344070 116344293 -136912290 - L1ME3A LINE L1 -341 5829 5586 867 176 0 0 chr2 116347245 116347381 -136909202 - AluJo SINE Alu -176 136 1 484 273 194 49 chr2 116350602 116351031 -136905552 + L1ME4a LINE L1 5374 5864 -257 208 173 19 0 chr2 116351151 116351203 -136905380 + (TTAA)n Simple_repeat Simple_repeat 2 54 0 2584 42 0 16 chr2 116351237 116351544 -136905039 + AluY SINE Alu 1 302 -9 400 259 59 41 chr2 116351636 116351806 -136904777 - MLT1J2 LTR MaLR -47 403 231 2186 83 0 4 chr2 116351849 116352125 -136904458 + AluY SINE Alu 1 275 -36 360 0 0 0 chr2 116352127 116352167 -136904416 + (TAA)n Simple_repeat Simple_repeat 2 41 0 297 274 133 9 chr2 116352435 116352548 -136904035 - MIR SINE MIR -78 184 58 223 257 257 0 chr2 116353212 116353282 -136903301 - MIR3 SINE MIR -14 194 107 4834 220 101 19 chr2 116353572 116355078 -136901505 + L1MB7 LINE L1 389 1769 -4877 2107 132 6 0 chr2 116355078 116355389 -136901194 + AluSq SINE Alu 1 313 0 4834 220 101 19 chr2 116355389 116355726 -136900857 + L1MB7 LINE L1 1769 2077 -4569 2256 86 0 0 chr2 116355726 116356033 -136900550 + AluSg SINE Alu 1 307 0 4834 220 101 19 chr2 116356033 116356206 -136900377 + L1MB7 LINE L1 2077 2608 -4038 875 222 30 17 chr2 116356216 116356450 -136900133 + L1MB7 LINE L1 3837 4073 -2571 2032 126 3 20 chr2 116356450 116356743 -136899840 + AluJb SINE Alu 3 290 -22 403 231 6 25 chr2 116356750 116356910 -136899673 + GA-rich Low_complexity Low_complexity 1 157 0 1953 207 40 26 chr2 116356912 116357410 -136899173 + L1MB7 LINE L1 4060 4564 -2080 2056 178 0 35 chr2 116357411 116357494 -136899089 + MLT1A1 LTR MaLR 2 86 -279 495 29 29 0 chr2 116357494 116357562 -136899021 + L1PA7 LINE L1 6085 6154 0 2056 178 0 35 chr2 116357562 116357855 -136898728 + MLT1A1 LTR MaLR 86 365 0 5586 190 25 15 chr2 116357856 116358210 -136898373 + L1MB7 LINE L1 4561 4910 -1772 1554 185 24 27 chr2 116358210 116358332 -136898251 + AluJo SINE Alu 10 131 -181 1855 132 15 0 chr2 116358332 116358597 -136897986 + AluSx SINE Alu 30 298 -14 1554 185 24 27 chr2 116358597 116358772 -136897811 + AluJo SINE Alu 131 306 -6 5586 190 25 15 chr2 116358772 116360502 -136896081 + L1MB7 LINE L1 4910 6663 -19 1696 293 54 41 chr2 116360558 116360960 -136895623 + L1MEc LINE L1 786 1181 -5215 2135 53 103 4 chr2 116360960 116361241 -136895342 + AluY SINE Alu 1 309 -2 1696 293 54 41 chr2 116361241 116361989 -136894594 + L1MEc LINE L1 1181 1951 -4445 1956 141 0 32 chr2 116362049 116362362 -136894221 - AluJb SINE Alu -8 304 2 307 198 58 47 chr2 116362510 116362596 -136893987 + L1MEc LINE L1 2075 2161 -4054 1961 84 0 0 chr2 116362597 116362836 -136893747 + AluSq SINE Alu 1 239 -74 343 178 110 0 chr2 116362868 116362941 -136893642 + AluSg/x SINE Alu 218 298 -2 573 226 26 7 chr2 116362942 116363097 -136893486 + L1MEc LINE L1 2189 2346 -4050 250 178 0 0 chr2 116363103 116363148 -136893435 + Alu SINE Alu 262 306 -2 189 0 0 0 chr2 116363148 116363169 -136893414 + (GGAA)n Simple_repeat Simple_repeat 3 23 0 468 150 0 0 chr2 116363185 116363265 -136893318 + (GA)n Simple_repeat Simple_repeat 1 80 0 1233 221 33 28 chr2 116363269 116363631 -136892952 + L1MEc LINE L1 2839 3202 -3013 1504 260 34 77 chr2 116363826 116364383 -136892200 + MER74A LTR ERVL 14 546 -12 697 278 47 9 chr2 116364398 116364740 -136891843 + L1MEc LINE L1 3198 3552 -2663 552 247 118 24 chr2 116364802 116364972 -136891611 + MIR SINE MIR 71 256 -6 467 302 114 5 chr2 116365024 116365226 -136891357 - MIR SINE MIR -14 248 25 2021 262 146 48 chr2 116365662 116365892 -136890691 - L2 LINE L2 -2 3311 3105 2372 48 35 0 chr2 116365892 116366181 -136890402 - AluY SINE Alu -12 299 1 2021 262 146 48 chr2 116366181 116367209 -136889374 - L2 LINE L2 -208 3105 1929 583 250 112 30 chr2 116367258 116367490 -136889093 + MIR SINE MIR 6 256 -6 379 339 132 28 chr2 116368210 116368499 -136888084 + L2 LINE L2 2953 3271 -1 26 0 0 0 chr2 116369036 116369062 -136887521 + AT_rich Low_complexity Low_complexity 1 26 0 2582 132 34 45 chr2 116369234 116369299 -136887284 - MLT1C LTR MaLR -1 466 402 2232 101 3 10 chr2 116369299 116369606 -136886977 + AluSg SINE Alu 1 305 -5 2582 132 34 45 chr2 116369606 116369835 -136886748 - MLT1C LTR MaLR -65 402 176 1885 115 34 37 chr2 116369835 116370130 -136886453 - AluJb SINE Alu -18 294 1 2582 132 34 45 chr2 116370130 116370305 -136886278 - MLT1C LTR MaLR -291 176 1 1503 96 5 0 chr2 116370348 116370545 -136886038 + AluSp SINE Alu 96 293 -20 273 183 0 0 chr2 116370635 116370695 -136885888 + CT-rich Low_complexity Low_complexity 2 61 0 1892 156 30 0 chr2 116370698 116370999 -136885584 - AluSx SINE Alu -2 310 1 2015 129 0 14 chr2 116371455 116371750 -136884833 - AluSx SINE Alu -21 291 1 14705 114 44 25 chr2 116371807 116373115 -136883468 - Tigger1 DNA MER2_type -6 2412 1132 414 110 27 0 chr2 116373115 116373188 -136883395 - L1PB4 LINE L1 -3 6153 6079 14705 114 44 25 chr2 116373188 116373384 -136883199 - Tigger1 DNA MER2_type -1286 1132 941 2144 118 0 0 chr2 116373384 116373671 -136882912 - AluSx SINE Alu -25 287 1 14705 114 44 25 chr2 116373671 116374529 -136882054 - Tigger1 DNA MER2_type -1477 941 2 713 201 201 25 chr2 116374674 116374957 -136881626 - HAL1 LINE L1 -824 1683 1351 3287 152 86 13 chr2 116375252 116375924 -136880659 - Cheshire DNA MER1_type 0 2420 1700 * 3298 191 96 63 chr2 116375915 116376874 -136879709 - Cheshire DNA MER1_type -1427 993 3 1752 170 50 70 chr2 116377072 116377554 -136879029 - Charlie4a DNA MER1_type -6 502 31 532 62 25 0 chr2 116378009 116378090 -136878493 + (CA)n Simple_repeat Simple_repeat 1 83 0 409 207 7 9 chr2 116378692 116378842 -136877741 - MER58B DNA MER1_type 0 341 41 2251 115 3 0 chr2 116379159 116379463 -136877120 + AluSx SINE Alu 2 306 -6 519 168 48 16 chr2 116380333 116380458 -136876125 - L1MC5 LINE L1 -30 7931 7803 2002 108 38 3 chr2 116381176 116381463 -136875120 + AluSx SINE Alu 1 297 -15 370 167 0 0 chr2 116381519 116381573 -136875010 + FRAM SINE Alu 59 112 -54 1475 155 29 73 chr2 116381962 116382278 -136874305 - AluJo SINE Alu -10 302 1 1994 78 38 55 chr2 116382782 116383075 -136873508 - AluSq SINE Alu -23 290 3 180 0 0 0 chr2 116383086 116383106 -136873477 + (T)n Simple_repeat Simple_repeat 1 20 0 362 308 100 0 chr2 116383524 116383644 -136872939 - MIR SINE MIR -59 149 18 485 235 57 85 chr2 116384088 116384224 -136872359 - Tigger8 DNA MER2_type -254 412 285 2240 113 3 0 chr2 116384224 116384524 -136872059 - AluSx SINE Alu -11 301 1 485 235 57 85 chr2 116384524 116384634 -136871949 - Tigger8 DNA MER2_type -381 285 173 379 82 33 0 chr2 116385080 116385141 -136871442 + AluS SINE Alu 12 74 -229 2152 90 3 7 chr2 116385159 116385448 -136871135 - AluY SINE Alu -14 297 10 1823 119 51 20 chr2 116386709 116387002 -136869581 - AluSx SINE Alu -10 302 1 703 276 128 9 chr2 116388402 116388996 -136867587 - L1ME3A LINE L1 -208 5962 5297 1949 52 4 8 chr2 116389140 116389390 -136867193 - L1PA5 LINE L1 0 6154 5906 1213 184 31 31 chr2 116389454 116389742 -136866841 - L1MB3 LINE L1 -2 6181 5894 275 80 100 0 chr2 116389744 116389794 -136866789 - L1MB3 LINE L1 -251 5932 5878 937 151 18 6 chr2 116389798 116389964 -136866619 - L1MB3 LINE L1 -207 5976 5809 4720 212 61 23 chr2 116390299 116390857 -136865726 + L1PA13 LINE L1 1532 2068 -4729 2570 97 77 12 chr2 116390857 116391259 -136865324 - MSTA LTR MaLR 0 428 1 4720 212 61 23 chr2 116391259 116391575 -136865008 + L1PA13 LINE L1 2068 2371 -4426 2219 114 3 0 chr2 116391575 116391873 -136864710 - AluSp SINE Alu -14 299 1 4720 212 61 23 chr2 116391873 116392890 -136863693 + L1PA13 LINE L1 2371 3553 -3244 2560 216 44 6 chr2 116392898 116393537 -136863046 - L1 LINE L1 -1073 5073 4411 831 136 0 119 chr2 116393537 116393713 -136862870 - Tigger2 DNA MER2_type 0 2718 2564 620 179 38 0 chr2 116393736 116393842 -136862741 - Tigger2 DNA MER2_type -2608 110 1 392 198 50 0 chr2 116393842 116393943 -136862640 - L1 LINE L1 -1734 4412 4307 2378 181 61 105 chr2 116394140 116394360 -136862223 + Charlie1 DNA MER1_type 1567 1795 -966 442 250 108 0 chr2 116394360 116394480 -136862103 + FLAM_A SINE Alu 1 133 0 2378 181 61 105 chr2 116394480 116394981 -136861602 + Charlie1 DNA MER1_type 1795 2256 -505 1951 122 35 14 chr2 116395036 116395324 -136861259 - AluSx SINE Alu -16 296 3 227 230 50 80 chr2 116395359 116395559 -136861024 - L1MDa LINE L1 -3904 2636 2443 693 248 92 4 chr2 116396083 116396321 -136860262 - L2 LINE L2 -1727 1587 1329 337 154 77 105 chr2 116396373 116396516 -136860067 - L1ME4a LINE L1 -273 5848 5710 192 318 79 0 chr2 116397149 116397212 -136859371 - MIR SINE MIR -70 192 125 21 82 0 0 chr2 116397343 116397392 -136859191 + AT_rich Low_complexity Low_complexity 1 49 0 24 0 0 0 chr2 116397917 116397941 -136858642 + AT_rich Low_complexity Low_complexity 1 24 0 340 45 23 0 chr2 116398168 116398212 -136858371 + AluY SINE Alu 2 46 -257 1800 168 16 0 chr2 116398314 116398618 -136857965 + AluJo SINE Alu 1 309 -3 224 271 106 12 chr2 116398756 116398841 -136857742 - MIR SINE MIR -18 244 152 704 212 10 78 chr2 116398886 116399079 -136857504 + MLT1L LTR MaLR 420 599 -16 1729 183 37 23 chr2 116399237 116399586 -136856997 + MLT1A1 LTR MaLR 10 363 -2 513 170 50 28 chr2 116399866 116400007 -136856576 + MER104 DNA Tc2 35 178 -2 1667 197 64 59 chr2 116400155 116400611 -136855972 + MLT1E1 LTR MaLR 5 462 -192 1236 238 127 5 chr2 116400611 116400899 -136855684 - L1MC4 LINE L1 -1160 6882 6538 2245 113 0 0 chr2 116400899 116401210 -136855373 - AluSx SINE Alu -1 311 1 1236 238 127 5 chr2 116401210 116401291 -136855292 - L1MC4 LINE L1 -1504 6538 6468 377 281 169 6 chr2 116402102 116402262 -136854321 - MIR SINE MIR -64 198 13 412 303 29 57 chr2 116402361 116402536 -136854047 + MIR SINE MIR 47 216 -46 817 274 5 22 chr2 116402797 116403020 -136853563 - L2 LINE L2 -1052 2262 2044 315 233 81 0 chr2 116403026 116403112 -136853471 + L1MEc LINE L1 2190 2282 -4114 2026 112 0 3 chr2 116403150 116403466 -136853117 - AluSx SINE Alu 0 315 1 942 193 28 0 chr2 116403466 116403642 -136852941 + MER58A DNA MER1_type 36 216 -8 1425 218 85 38 chr2 116403642 116404098 -136852485 + L1MEc LINE L1 2262 2749 -3466 2119 110 7 0 chr2 116404098 116404399 -136852184 - AluSx SINE Alu -9 303 1 1425 218 85 38 chr2 116404399 116404483 -136852100 + L1MEc LINE L1 2749 2828 -3387 1582 200 0 0 chr2 116404631 116404921 -136851662 + AluJb SINE Alu 10 299 -13 1173 151 65 5 chr2 116404947 116405146 -136851437 + AluJo SINE Alu 3 213 -99 1072 256 20 79 chr2 116405174 116405718 -136850865 + L1MEc LINE L1 3146 3657 -2558 1238 217 22 9 chr2 116405721 116406039 -136850544 + L1MEc LINE L1 4606 4927 -1288 1162 125 55 16 chr2 116406036 116406292 -136850291 - L1MDa LINE L1 -3968 2572 2307 * 6231 231 64 28 chr2 116406294 116407648 -136848935 - L1M4c LINE L1 -4133 2692 1389 2606 91 8 3 chr2 116407648 116408001 -136848582 + THE1A LTR MaLR 1 355 0 6231 231 64 28 chr2 116408001 116408589 -136847994 - L1M4c LINE L1 -5436 1389 824 186 71 0 0 chr2 116408589 116408617 -136847966 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 6231 231 64 28 chr2 116408617 116409130 -136847453 - L1M4c LINE L1 -6001 824 16 308 204 11 11 chr2 116409208 116409296 -136847287 + (TA)n Simple_repeat Simple_repeat 2 89 0 1931 117 13 28 chr2 116410815 116411132 -136845451 + AluSx SINE Alu 1 312 0 390 331 0 46 chr2 116411502 116411599 -136844984 - MER90 LTR ERV1 -1 613 522 1735 179 45 45 chr2 116411599 116411995 -136844588 - MSTD LTR MaLR 0 396 1 390 331 0 46 chr2 116411995 116412027 -136844556 - MER90 LTR ERV1 -92 522 490 1975 183 5 42 chr2 116412772 116412984 -136843599 - MLT1A1 LTR MaLR 0 365 171 1880 121 14 4 chr2 116412984 116413300 -136843283 - AluSx SINE Alu 0 319 1 1975 183 5 42 chr2 116413300 116413463 -136843120 - MLT1A1 LTR MaLR -194 171 3 1153 248 105 60 chr2 116414090 116414379 -136842204 - MLT1C LTR MaLR 0 467 192 369 0 0 0 chr2 116414379 116414420 -136842163 + (TG)n Simple_repeat Simple_repeat 2 42 0 1153 248 105 60 chr2 116414420 116414532 -136842051 - MLT1C LTR MaLR -275 192 42 2697 112 0 8 chr2 116414532 116414899 -136841684 + THE1B LTR MaLR 1 364 0 1153 248 105 60 chr2 116414899 116414943 -136841640 - MLT1C LTR MaLR -425 42 1 806 155 5 125 chr2 116415085 116415285 -136841298 + AluJb SINE Alu 137 312 0 547 242 124 7 chr2 116415424 116415577 -136841006 - MLT1I LTR MaLR -4 405 235 210 273 18 0 chr2 116415842 116415897 -136840686 - L2 LINE L2 -57 3256 3201 720 226 60 71 chr2 116416950 116417216 -136839367 + MLT1G LTR MaLR 2 264 -326 185 245 20 41 chr2 116417397 116417446 -136839137 - L2 LINE L2 -13 3259 3212 1065 201 158 26 chr2 116417446 116417719 -136838864 + MLT1G LTR MaLR 269 577 -13 1176 181 150 54 chr2 116417991 116418207 -136838376 - MER2 DNA MER2_type 0 344 87 2097 111 3 0 chr2 116418207 116418496 -136838087 - AluSx SINE Alu -22 290 1 1176 181 150 54 chr2 116418496 116418593 -136837990 - MER2 DNA MER2_type -257 87 1 462 335 43 5 chr2 116418638 116418826 -136837757 + L2 LINE L2 3103 3297 -16 348 356 0 0 chr2 116419459 116419563 -136837020 - HAL1b LINE L1 -964 384 281 2222 107 3 3 chr2 116419592 116419902 -136836681 - AluSx SINE Alu -2 310 1 315 311 105 70 chr2 116420255 116420541 -136836042 + HAL1 LINE L1 905 1200 -1307 1242 86 0 43 chr2 116421658 116421845 -136834738 - AluSg/x SINE Alu 0 312 134 319 219 35 26 chr2 116421874 116421988 -136834595 - L1ME4a LINE L1 0 6121 6007 215 213 64 0 chr2 116422339 116422386 -136834197 - MER91 DNA MER1_type -3 187 138 2093 103 0 10 chr2 116423903 116424204 -136832379 - AluSx SINE Alu -14 298 1 1587 138 14 30 chr2 116424484 116424780 -136831803 - L1MB3 LINE L1 -2 6181 5891 1869 156 3 19 chr2 116424849 116425163 -136831420 + AluSx SINE Alu 1 309 -3 225 194 14 14 chr2 116425224 116425259 -136831324 + (CAAA)n Simple_repeat Simple_repeat 4 38 -37 10457 161 20 43 chr2 116425259 116427607 -136828976 + L1PA14 LINE L1 3432 5763 -398 2371 66 0 19 chr2 116427607 116427924 -136828659 + AluY SINE Alu 1 311 0 10457 161 20 43 chr2 116427924 116428313 -136828270 + L1PA14 LINE L1 5763 6159 -2 225 194 14 14 chr2 116428313 116428349 -136828234 + (CAAA)n Simple_repeat Simple_repeat 37 75 0 342 286 36 14 chr2 116430658 116430798 -136825785 + MER117 DNA MER1_type 15 157 -40 210 149 23 46 chr2 116431599 116431686 -136824897 + (TATATG)n Simple_repeat Simple_repeat 1 85 0 355 202 22 34 chr2 116431686 116431775 -136824808 - L1MC4 LINE L1 -1340 6702 6615 344 205 84 12 chr2 116431703 116431786 -136824797 + L1MC4 LINE L1 6615 6703 -1339 * 319 254 0 14 chr2 116431756 116431827 -136824756 - L1MCa LINE L1 -4362 2064 1995 * 301 299 58 0 chr2 116431757 116431844 -136824739 + L1MCa LINE L1 1995 2086 -4340 * 2066 124 0 0 chr2 116433326 116433625 -136822958 + AluSx SINE Alu 1 299 -13 216 125 0 50 chr2 116435493 116435533 -136821050 + (GGGTG)n Simple_repeat Simple_repeat 3 40 0 2803 185 133 87 chr2 116436600 116437926 -136818657 - L1MC5 LINE L1 -28 7933 6548 801 199 6 12 chr2 116437966 116438112 -136818471 - AluJo SINE Alu -32 280 134 2070 109 3 20 chr2 116438112 116438443 -136818140 - AluSx SINE Alu 0 312 1 801 199 6 12 chr2 116438443 116438457 -136818126 - AluJo SINE Alu -178 134 121 389 178 78 31 chr2 116438992 116439121 -136817462 + L1MC5 LINE L1 7518 7652 -309 255 230 54 0 chr2 116439135 116439209 -136817374 + L1MC5 LINE L1 7848 7925 -36 1863 77 0 16 chr2 116439229 116439477 -136817106 + AluY SINE Alu 1 244 -67 229 200 0 0 chr2 116439610 116439655 -136816928 + L1ME4a LINE L1 5946 5990 -131 199 231 0 0 chr2 116439697 116439736 -136816847 - L2 LINE L2 -2 3311 3273 849 255 134 67 chr2 116439908 116440504 -136816079 + L2 LINE L2 2051 2686 -628 1816 117 0 11 chr2 116440720 116440985 -136815598 - AluSx SINE Alu -1 311 50 2264 105 0 3 chr2 116441006 116441320 -136815263 - AluSq SINE Alu 0 313 1 311 348 36 0 chr2 116441540 116441678 -136814905 + L2 LINE L2 3171 3313 0 187 54 54 0 chr2 116441963 116442000 -136814583 + T-rich Low_complexity Low_complexity 2 40 0 2021 95 3 7 chr2 116442006 116442289 -136814294 - AluSx SINE Alu -30 282 1 477 0 0 0 chr2 116443356 116443409 -136813174 + (CATAA)n Simple_repeat Simple_repeat 4 56 0 396 256 125 54 chr2 116443564 116443732 -136812851 + MER5A DNA MER1_type 3 182 -7 2059 130 0 0 chr2 116444928 116445235 -136811348 + AluSx SINE Alu 1 307 -5 612 239 128 69 chr2 116445746 116445964 -136810619 + MIR SINE MIR 13 243 -19 193 405 24 18 chr2 116446372 116446540 -136810043 - MIR SINE MIR -14 248 80 675 274 99 50 chr2 116446567 116447023 -136809560 + L2 LINE L2 2836 3313 0 236 265 0 0 chr2 116447034 116447083 -136809500 - L2 LINE L2 -18 3295 3247 897 268 162 10 chr2 116447083 116447552 -136809031 - L2 LINE L2 -43 3270 2741 224 211 0 0 chr2 116448504 116448542 -136808041 + MIR SINE MIR 214 251 -11 205 291 0 0 chr2 116448542 116448559 -136808024 + L2 LINE L2 3259 3313 0 1546 173 41 0 chr2 116448969 116449240 -136807343 + AluJo SINE Alu 1 282 -30 912 175 0 0 chr2 116450412 116450630 -136805953 + (TG)n Simple_repeat Simple_repeat 1 218 0 391 250 24 0 chr2 116450633 116450717 -136805866 + L1MC1 LINE L1 6232 6317 -16 2413 18 0 0 chr2 116450989 116451304 -136805279 + AluY SINE Alu 1 315 0 547 168 56 0 chr2 116452244 116452351 -136804232 - MLT1B LTR MaLR -48 342 230 1636 188 13 13 chr2 116452404 116452540 -136804043 + AluJb SINE Alu 1 136 -176 2062 107 0 23 chr2 116452540 116452869 -136803714 + AluSx SINE Alu 1 312 0 1636 188 13 13 chr2 116452869 116453036 -136803547 + AluJb SINE Alu 135 304 -8 2370 59 7 3 chr2 116453082 116453387 -136803196 + AluY SINE Alu 1 306 -5 1434 129 165 0 chr2 116453395 116453643 -136802940 + AluJb SINE Alu 1 289 -23 396 237 82 37 chr2 116453826 116453897 -136802686 + L1ME4a LINE L1 5979 6045 -76 2107 119 0 0 chr2 116453897 116454191 -136802392 - AluSx SINE Alu -18 294 1 396 237 82 37 chr2 116454191 116454254 -136802329 + L1ME4a LINE L1 6045 6119 -2 186 71 0 0 chr2 116454339 116454367 -136802216 + (CCA)n Simple_repeat Simple_repeat 2 29 0 272 336 106 0 chr2 116454890 116454994 -136801589 - MIR SINE MIR -113 149 35 248 224 136 24 chr2 116456136 116456261 -136800322 - L1ME4a LINE L1 -2 6119 5981 343 309 94 0 chr2 116456847 116456996 -136799587 + MER69A DNA AcHobo 1 163 -14 206 190 69 0 chr2 116458304 116458362 -136798221 + (TA)n Simple_repeat Simple_repeat 2 63 0 1569 165 95 43 chr2 116458362 116458785 -136797798 - MLT2D LTR ERVL -25 439 1 219 200 22 0 chr2 116459229 116459274 -136797309 + (TGAA)n Simple_repeat Simple_repeat 1 46 0 270 280 86 40 chr2 116460134 116460309 -136796274 + L2 LINE L2 2885 3067 -246 460 265 185 5 chr2 116460463 116460674 -136795909 - MIR SINE MIR -12 250 2 1271 261 73 19 chr2 116462274 116462493 -136794090 + MLT1H LTR MaLR 14 220 -329 198 71 0 0 chr2 116462493 116462521 -136794062 + (CCA)n Simple_repeat Simple_repeat 1 28 0 1271 261 73 19 chr2 116462521 116462727 -136793856 + MLT1H LTR MaLR 220 462 -87 183 186 93 0 chr2 116462794 116462837 -136793746 + L2 LINE L2 3262 3308 -5 309 270 198 33 chr2 116463517 116463880 -136792703 + HAL1 LINE L1 1701 2123 -384 709 233 64 20 chr2 116463987 116464189 -136792394 + L1ME1 LINE L1 3401 3611 -2535 * 2997 237 81 36 chr2 116464187 116464940 -136791643 + L1ME1 LINE L1 3855 4678 -1468 2040 100 3 23 chr2 116464940 116465240 -136791343 - AluSq SINE Alu -19 294 1 2997 237 81 36 chr2 116465240 116465622 -136790961 + L1ME1 LINE L1 4678 5041 -1105 2000 242 71 60 chr2 116465727 116466178 -136790405 + L1ME1 LINE L1 5317 5761 -405 2375 64 0 10 chr2 116466178 116466489 -136790094 + AluSc SINE Alu 1 308 -1 2000 242 71 60 chr2 116466489 116466565 -136790018 + L1ME1 LINE L1 5761 5835 -331 3395 115 18 6 chr2 116466565 116467068 -136789515 - MER75 DNA T2_type -3 511 3 2000 242 71 60 chr2 116467068 116467120 -136789463 + L1ME1 LINE L1 5835 5885 -281 917 145 0 0 chr2 116467120 116467251 -136789332 + FLAM_C SINE Alu 1 131 -2 2000 242 71 60 chr2 116467251 116467459 -136789124 + L1ME1 LINE L1 5885 6115 -51 25 0 0 0 chr2 116467467 116467492 -136789091 + AT_rich Low_complexity Low_complexity 1 25 0 425 274 0 7 chr2 116468013 116468159 -136788424 + (CA)n Simple_repeat Simple_repeat 2 146 0 207 203 0 0 chr2 116468183 116468247 -136788336 + (CA)n Simple_repeat Simple_repeat 2 65 0 313 289 67 44 chr2 116468575 116468800 -136787783 - L2 LINE L2 -93 3220 2991 474 227 87 33 chr2 116469669 116469819 -136786764 + MIR SINE MIR 34 191 -71 217 252 56 0 chr2 116471987 116472130 -136784453 + GA-rich Low_complexity Low_complexity 2 152 0 33 94 0 0 chr2 116472306 116472402 -136784181 + GC_rich Low_complexity Low_complexity 1 96 0 1983 163 80 3 chr2 116473337 116473675 -136782908 - MLT1A1 LTR MaLR 0 365 2 2019 122 3 0 chr2 116473800 116474087 -136782496 - AluSx SINE Alu -16 296 9 235 293 0 0 chr2 116474539 116474597 -136781986 - MIR SINE MIR -116 146 89 186 111 16 79 chr2 116474758 116474821 -136781762 + (TTTTTG)n Simple_repeat Simple_repeat 2 60 0 2068 110 7 10 chr2 116475143 116475442 -136781141 - AluSg SINE Alu -12 298 1 2061 136 3 0 chr2 116475690 116475991 -136780592 + AluSx SINE Alu 1 302 -10 2124 117 10 0 chr2 116475991 116476298 -136780285 + AluY SINE Alu 1 311 0 1818 121 64 0 chr2 116526334 116526614 -136729969 - AluSx SINE Alu 0 312 15 322 278 107 18 chr2 116526839 116527008 -136729575 + MIR SINE MIR 18 201 -61 421 312 45 0 chr2 116527009 116527166 -136729417 + L1M4 LINE L1 5465 5628 -536 1710 161 7 7 chr2 116527206 116527510 -136729073 - AluJb SINE Alu -8 304 1 241 217 14 43 chr2 116527522 116527591 -136728992 + L1M4 LINE L1 5610 5676 -498 224 225 45 0 chr2 116527755 116527844 -136728739 + (TA)n Simple_repeat Simple_repeat 2 94 0 2135 88 10 3 chr2 116527905 116528201 -136728382 - AluSq SINE Alu -11 302 5 2341 87 0 0 chr2 116528298 116528609 -136727974 - AluY SINE Alu 0 311 1 480 229 99 45 chr2 116528881 116529104 -136727479 - L1M4 LINE L1 -3221 2925 2691 416 143 214 20 chr2 116529130 116529228 -136727355 - LTR16C LTR ERVL -1 490 374 198 319 181 35 chr2 116529400 116529632 -136726951 + L2 LINE L2 2127 2392 -922 1678 159 22 0 chr2 116529803 116530108 -136726475 - AluSx SINE Alu 0 311 1 1877 143 6 13 chr2 116530386 116530700 -136725883 - AluSx SINE Alu 0 312 1 1270 89 6 0 chr2 116530914 116531082 -136725501 - AluSg/x SINE Alu -16 296 128 197 260 20 0 chr2 116533238 116533288 -136723295 - MIR3 SINE MIR -49 159 109 675 37 0 0 chr2 116533762 116533844 -136722739 + (TAGA)n Simple_repeat Simple_repeat 4 85 0 2357 65 16 3 chr2 116534162 116534469 -136722114 - AluY SINE Alu 0 311 1 1173 260 143 26 chr2 116534534 116534650 -136721933 - HAL1 LINE L1 -303 2204 2103 851 20 0 0 chr2 116534650 116534749 -136721834 - L1PA2 LINE L1 -2 6153 6055 1173 260 143 26 chr2 116534749 116534888 -136721695 - HAL1 LINE L1 -404 2103 1982 180 0 0 0 chr2 116534888 116534908 -136721675 + (ATTG)n Simple_repeat Simple_repeat 1 20 0 1173 260 143 26 chr2 116534908 116535142 -136721441 - HAL1 LINE L1 -525 1982 1777 1545 110 4 4 chr2 116535142 116535369 -136721214 - AluSg/x SINE Alu -8 304 78 1173 260 143 26 chr2 116535369 116535526 -136721057 - HAL1 LINE L1 -730 1777 1480 354 185 288 27 chr2 116535548 116535732 -136720851 - HAL1 LINE L1 -1163 1344 1113 275 318 59 0 chr2 116536213 116536298 -136720285 + MIR3 SINE MIR 65 154 -54 1776 97 109 0 chr2 116536513 116536780 -136719803 + AluSc SINE Alu 1 296 -13 1692 187 170 98 chr2 116536909 116536985 -136719598 + L1M4 LINE L1 2201 2270 -3876 198 0 0 0 chr2 116536985 116537007 -136719576 + (AATAG)n Simple_repeat Simple_repeat 3 24 0 1692 187 170 98 chr2 116537007 116537119 -136719464 + L1M4 LINE L1 2270 2373 -3773 1884 146 6 19 chr2 116537119 116537434 -136719149 + AluJb SINE Alu 1 311 -1 1692 187 170 98 chr2 116537434 116537624 -136718959 + L1M4 LINE L1 2373 2548 -3598 318 53 0 0 chr2 116537624 116537662 -136718921 + U2 snRNA snRNA 1 38 -150 1692 187 170 98 chr2 116537662 116537681 -136718902 + L1M4 LINE L1 2548 2564 -3582 1618 182 37 7 chr2 116537681 116537978 -136718605 + AluJb SINE Alu 1 306 -6 1692 187 170 98 chr2 116537978 116538302 -136718281 + L1M4 LINE L1 2564 2863 -3283 1557 98 5 0 chr2 116538302 116538516 -136718067 + AluSp SINE Alu 84 298 -15 1692 187 170 98 chr2 116538516 116538561 -136718022 + L1M4 LINE L1 2863 2903 -3243 1601 199 10 0 chr2 116538561 116538858 -136717725 + AluJo SINE Alu 1 300 -12 1692 187 170 98 chr2 116538858 116539055 -136717528 + L1M4 LINE L1 2903 3278 -2868 655 114 0 0 chr2 116539056 116539144 -136717439 + AluS SINE Alu 1 88 -224 43876 37 22 2 chr2 116539144 116545173 -136711410 + L1PA5 LINE L1 2 6151 -3 306 67 0 0 chr2 116545597 116545642 -136710941 + (CA)n Simple_repeat Simple_repeat 2 46 0 201 74 0 0 chr2 116545787 116545814 -136710769 + (TGG)n Simple_repeat Simple_repeat 1 27 0 717 321 222 18 chr2 116545838 116546985 -136709598 - L2 LINE L2 -417 2897 1517 301 345 72 52 chr2 116547034 116547324 -136709259 + L2 LINE L2 2966 3261 -11 1777 135 7 40 chr2 116548043 116548347 -136708236 - AluJb SINE Alu -18 294 1 2364 81 3 0 chr2 116548815 116549122 -136707461 - AluSp SINE Alu -5 308 1 189 0 0 0 chr2 116549399 116549420 -136707163 + (A)n Simple_repeat Simple_repeat 1 21 0 1342 81 0 0 chr2 116549788 116549949 -136706634 - AluSp SINE Alu -152 161 1 1929 163 36 0 chr2 116549958 116550259 -136706324 - AluSx SINE Alu 0 312 1 277 273 211 0 chr2 116550262 116550414 -136706169 - L1ME LINE L1 -652 5514 5332 720 259 32 33 chr2 116550414 116550743 -136705840 - MLT1I LTR MaLR 0 549 69 1388 135 54 9 chr2 116550852 116551074 -136705509 - AluSp SINE Alu -9 304 73 342 0 0 0 chr2 116551074 116551112 -136705471 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 2156 101 0 14 chr2 116551112 116551398 -136705185 - AluSx SINE Alu -30 282 1 790 228 69 72 chr2 116551409 116552261 -136704322 - L1MDa LINE L1 -3938 2488 1631 376 259 9 0 chr2 116552261 116552377 -136704206 + (TA)n Simple_repeat Simple_repeat 1 117 0 580 292 68 54 chr2 116552693 116552803 -136703780 - L1MEc LINE L1 -4576 1820 1713 1977 143 10 3 chr2 116552803 116553096 -136703487 + AluSx SINE Alu 1 295 -17 580 292 68 54 chr2 116553096 116553784 -136702799 - L1MEc LINE L1 -4683 1713 1011 494 241 12 1 chr2 116553926 116554094 -136702489 + MER58 DNA MER1_type 26 2420 0 360 322 50 0 chr2 116554226 116554347 -136702236 - L1ME3 LINE L1 -29 6133 6007 2036 103 4 4 chr2 116554367 116554638 -136701945 + AluY SINE Alu 1 271 -40 279 208 115 0 chr2 116554739 116554835 -136701748 + HAL1 LINE L1 118 224 -2283 236 265 122 0 chr2 116554837 116554935 -136701648 + HAL1 LINE L1 268 377 -2130 2288 100 3 0 chr2 116554970 116555270 -136701313 + AluSq SINE Alu 1 301 -12 498 131 50 0 chr2 116555270 116555369 -136701214 - Tigger6 DNA MER2_type -151 1446 1343 * 1048 249 55 0 chr2 116555367 116555624 -136700959 - Tigger6 DNA MER2_type -383 1214 944 2083 131 10 3 chr2 116555736 116556042 -136700541 + AluSx SINE Alu 1 308 -4 2047 90 0 8 chr2 116556042 116556309 -136700274 + AluSc SINE Alu 39 303 -6 644 133 0 0 chr2 116556386 116556476 -136700107 + AluS SINE Alu 2 91 -221 1531 123 4 87 chr2 116556476 116556587 -136699996 + AluSx SINE Alu 45 164 -148 2291 117 0 7 chr2 116556587 116556896 -136699687 + AluSg SINE Alu 1 307 -3 1531 123 4 87 chr2 116556896 116557060 -136699523 + AluSx SINE Alu 164 297 -15 1438 217 35 6 chr2 116557206 116557520 -136699063 - Tigger6 DNA MER2_type -1273 324 2 701 179 172 13 chr2 116557660 116557811 -136698772 - MER20 DNA MER1_type 0 219 45 445 234 212 0 chr2 116557948 116558085 -136698498 + HAL1 LINE L1 2308 2473 -34 2270 90 3 3 chr2 116558144 116558432 -136698151 + AluSq SINE Alu 8 295 -18 304 109 65 0 chr2 116558603 116558649 -136697934 + MER30B DNA MER1_type 6 54 -136 192 301 126 0 chr2 116558953 116559056 -136697527 + MIR SINE MIR 75 190 -72 2120 142 91 18 chr2 116559403 116559798 -136696785 + Tigger2a DNA MER2_type 5 428 -6 2159 105 29 16 chr2 116559894 116560200 -136696383 + AluSx SINE Alu 1 310 -2 2094 124 3 3 chr2 116561702 116562001 -136694582 - AluSg SINE Alu -11 299 1 2097 137 0 0 chr2 116562454 116562754 -136693829 + AluSx SINE Alu 1 300 -12 23 0 0 0 chr2 116562786 116562809 -136693774 + AT_rich Low_complexity Low_complexity 1 23 0 373 165 304 0 chr2 116565686 116565801 -136690782 - MER58C DNA MER1_type 0 215 66 2321 99 0 16 chr2 116567802 116568114 -136688469 + AluSx SINE Alu 1 307 -5 2083 126 3 7 chr2 116568302 116568603 -136687980 + AluSx SINE Alu 1 300 -12 1758 114 0 39 chr2 116569149 116569403 -136687180 - AluSx SINE Alu -14 298 55 845 140 28 14 chr2 116569403 116569546 -136687037 - AluSq/x SINE Alu -168 145 1 1298 150 56 38 chr2 116570157 116570423 -136686160 + AluJb SINE Alu 6 276 -36 2273 99 13 0 chr2 116571140 116571443 -136685140 + AluSp SINE Alu 1 307 -6 340 252 156 64 chr2 116571498 116571716 -136684867 - MER112 DNA MER1_type -22 238 1 591 273 139 49 chr2 116573073 116573439 -136683144 - L2 LINE L2 -34 3279 2881 2022 130 0 10 chr2 116573523 116573822 -136682761 + AluY SINE Alu 1 296 -15 1663 174 14 14 chr2 116574311 116574599 -136681984 + AluJo SINE Alu 9 296 -16 2267 85 17 7 chr2 116574599 116574893 -136681690 + AluSx SINE Alu 1 298 -14 35 0 0 0 chr2 116578483 116578518 -136678065 + AT_rich Low_complexity Low_complexity 1 35 0 1511 136 8 27 chr2 116578949 116579206 -136677377 + L1P4 LINE L1 5449 5700 -466 489 240 0 23 chr2 116579459 116579588 -136676995 - FLAM_C SINE Alu -7 126 1 1040 172 88 15 chr2 116579629 116579833 -136676750 - AluSp SINE Alu -22 291 73 342 0 0 0 chr2 116579833 116579871 -136676712 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 2103 110 3 7 chr2 116579871 116580153 -136676430 - AluSx SINE Alu -30 282 2 1880 140 0 11 chr2 116580471 116580750 -136675833 - AluSx SINE Alu -36 276 1 2175 109 3 16 chr2 116580910 116581223 -136675360 + AluSc SINE Alu 1 309 0 630 88 0 0 chr2 116581498 116581578 -136675005 - MADE1 DNA Mariner 0 80 1 2495 94 0 0 chr2 116582206 116582514 -136674069 - AluSg SINE Alu -2 308 1 1761 181 0 10 chr2 116583429 116583728 -136672855 - AluJb SINE Alu -15 297 2 571 316 48 5 chr2 116583801 116584010 -136672573 + MIR SINE MIR 40 257 -5 679 210 138 31 chr2 116584192 116584387 -136672196 - MLT1J LTR MaLR 0 511 296 306 122 112 102 chr2 116584530 116584628 -136671955 - LTR50 LTR ERVL -8 787 689 522 194 276 35 chr2 116584684 116584871 -136671712 - LTR50 LTR ERVL -283 512 371 2300 90 30 0 chr2 116584871 116585170 -136671413 + AluSx SINE Alu 1 308 -4 522 194 276 35 chr2 116585170 116585384 -136671199 - LTR50 LTR ERVL -424 371 14 941 221 33 44 chr2 116585395 116585666 -136670917 - L1MC4 LINE L1 -683 7359 7092 314 261 43 26 chr2 116585678 116585793 -136670790 - MLT1J LTR MaLR -394 117 1 184 0 0 0 chr2 116585974 116585997 -136670586 - MER5B DNA MER1_type 0 178 156 1096 168 26 0 chr2 116585997 116586188 -136670395 + MSTB LTR MaLR 1 196 -230 2465 99 0 0 chr2 116586189 116586493 -136670090 + AluSx SINE Alu 1 304 -8 2302 116 3 0 chr2 116586493 116586802 -136669781 + AluSp SINE Alu 1 311 -2 917 140 0 15 chr2 116586808 116586944 -136669639 + FLAM_C SINE Alu 1 134 -9 1505 143 22 0 chr2 116586947 116587177 -136669406 + MSTB LTR MaLR 192 426 0 472 269 92 0 chr2 116587177 116587318 -136669265 - MER5B DNA MER1_type -18 160 7 2156 125 6 3 chr2 116587848 116588159 -136668424 + AluSq SINE Alu 1 312 -1 2258 105 0 10 chr2 116588206 116588511 -136668072 + AluSp SINE Alu 1 302 -11 274 202 45 0 chr2 116588572 116588661 -136667922 + (TA)n Simple_repeat Simple_repeat 2 94 0 247 217 14 43 chr2 116588825 116588894 -136667689 - L1M4 LINE L1 -498 5676 5610 2003 154 0 3 chr2 116588906 116589211 -136667372 + AluJb SINE Alu 1 304 -8 430 312 45 0 chr2 116589251 116589408 -136667175 - L1M4 LINE L1 -536 5628 5465 257 278 107 18 chr2 116589409 116589578 -136667005 - MIR SINE MIR -61 201 18 1988 123 65 0 chr2 116589791 116590084 -136666499 + AluSx SINE Alu 1 312 0 919 156 13 19 chr2 116590114 116590268 -136666315 - FRAM SINE Alu -13 153 1 1247 216 87 94 chr2 116590272 116590822 -136665761 + MLT1H1 LTR MaLR 1 546 -9 2217 115 3 0 chr2 116591195 116591499 -136665084 - AluSq SINE Alu -8 305 1 267 278 120 9 chr2 116591524 116591632 -136664951 - MIR SINE MIR -66 196 77 2047 100 50 0 chr2 116592163 116592468 -136664115 + AluSq SINE Alu 1 319 0 951 174 6 0 chr2 116592484 116592645 -136663938 + AluJb SINE Alu 142 303 -9 779 105 24 24 chr2 116593488 116593612 -136662971 - LTR15 LTR ERV1 -7 486 363 604 286 101 34 chr2 116593753 116593843 -136662740 + MLT1K LTR MaLR 208 291 -297 2495 52 0 0 chr2 116593843 116594133 -136662450 - AluY SINE Alu -21 290 1 604 286 101 34 chr2 116594133 116594398 -136662185 + MLT1K LTR MaLR 291 587 -1 393 250 12 38 chr2 116595095 116595255 -136661328 + L1ME LINE L1 4693 4848 -1298 1107 189 48 5 chr2 116595311 116595517 -136661066 + MER20B DNA MER1_type 5 219 0 361 225 56 49 chr2 116596008 116596150 -136660433 + L1ME LINE L1 5456 5598 -523 1155 188 33 66 chr2 116596370 116596453 -136660130 - MER33 DNA MER1_type -2261 324 240 1760 153 36 0 chr2 116596453 116596750 -136659833 + AluJo SINE Alu 1 307 0 1155 188 33 66 chr2 116596750 116596776 -136659807 - MER33 DNA MER1_type -2345 240 215 2236 99 3 0 chr2 116596776 116597060 -136659523 - AluSp SINE Alu -27 286 2 1155 188 33 66 chr2 116597060 116597283 -136659300 - MER33 DNA MER1_type -2370 215 1 200 226 48 16 chr2 116597288 116597350 -136659233 - MIR SINE MIR -89 173 110 277 130 0 0 chr2 116597712 116597758 -136658825 - AluJo SINE Alu -2 300 255 1263 142 19 33 chr2 116597758 116597970 -136658613 - AluJo SINE Alu -103 209 1 1506 197 11 0 chr2 116599046 116599330 -136657253 - AluJb SINE Alu -25 287 1 234 254 0 32 chr2 116600197 116600260 -136656323 + AluYb8 SINE Alu 123 183 -125 511 181 0 32 chr2 116600279 116600373 -136656210 + FLAM_A SINE Alu 20 110 -32 297 0 0 0 chr2 116600380 116600413 -136656170 + (CA)n Simple_repeat Simple_repeat 2 34 0 1679 167 22 41 chr2 116600477 116600795 -136655788 + AluJo SINE Alu 1 312 0 20546 117 21 73 chr2 116600999 116602727 -136653856 - L1P LINE L1 -2264 3882 2066 2106 116 30 0 chr2 116602727 116603028 -136653555 - AluSg SINE Alu 0 310 1 20546 117 21 73 chr2 116603028 116605381 -136651202 - L1P LINE L1 -4080 2066 12 1011 133 6 12 chr2 116605391 116605556 -136651027 + LTR8 LTR ERV1 528 691 0 299 202 73 55 chr2 116605563 116605672 -136650911 - REP3 LTR ERV -433 129 19 1958 128 10 3 chr2 116605735 116606024 -136650559 - AluSx SINE Alu -7 305 15 1792 180 10 3 chr2 116606044 116606344 -136650239 - AluSq SINE Alu -11 302 1 2033 143 7 3 chr2 116606934 116607228 -136649355 - AluSx SINE Alu -15 297 3 186 43 0 0 chr2 116607720 116607743 -136648840 + (TG)n Simple_repeat Simple_repeat 2 24 0 1990 106 6 48 chr2 116607906 116608217 -136648366 + AluSc SINE Alu 1 298 -11 2234 88 11 0 chr2 116608218 116608502 -136648081 + AluSx SINE Alu 2 288 -24 516 99 0 0 chr2 116609910 116609981 -136646602 + AluSp/q SINE Alu 229 299 -14 1650 200 3 7 chr2 116609981 116610276 -136646307 + AluJo SINE Alu 1 294 -18 1470 158 0 9 chr2 116610506 116610728 -136645855 - AluJo SINE Alu -22 290 71 22 35 0 0 chr2 116610822 116610851 -136645732 + AT_rich Low_complexity Low_complexity 1 29 0 262 169 31 15 chr2 116611520 116611585 -136644998 - MIR3 SINE MIR -14 194 129 3287 207 87 23 chr2 116612329 116612717 -136643866 + L1MA9 LINE L1 5270 5632 -680 2212 113 27 0 chr2 116612717 116613010 -136643573 + AluSx SINE Alu 1 301 -11 3287 207 87 23 chr2 116613010 116613566 -136643017 + L1MA9 LINE L1 5632 6274 -38 212 269 45 15 chr2 116614512 116614579 -136642004 - MIR SINE MIR -1 261 193 2306 125 0 0 chr2 116614592 116614897 -136641686 + AluSx SINE Alu 1 305 -7 1090 278 94 40 chr2 116614897 116614946 -136641637 + MLT1K LTR MaLR 14 59 -529 2115 138 7 0 chr2 116614946 116615235 -136641348 + AluSx SINE Alu 1 291 -21 1090 278 94 40 chr2 116615235 116615728 -136640855 + MLT1K LTR MaLR 59 585 -3 297 0 0 0 chr2 116615729 116615762 -136640821 + (CA)n Simple_repeat Simple_repeat 2 34 0 237 270 110 28 chr2 116615781 116615956 -136640627 - MIR SINE MIR -10 252 3 531 290 83 25 chr2 116616276 116616552 -136640031 - MLT1J LTR MaLR -151 360 69 205 286 114 0 chr2 116616931 116617001 -136639582 - L2 LINE L2 -55 3258 3181 2183 126 3 0 chr2 116617722 116618023 -136638560 + AluSx SINE Alu 2 303 -9 1254 104 0 12 chr2 116618976 116619140 -136637443 + AluSq SINE Alu 83 244 -69 288 0 0 0 chr2 116619140 116619172 -136637411 + (TG)n Simple_repeat Simple_repeat 1 32 0 625 147 133 0 chr2 116619690 116619833 -136636750 + MER112 DNA MER1_type 34 195 -65 1088 118 0 79 chr2 116620514 116620692 -136635891 - AluSg/x SINE Alu -11 299 136 205 286 114 0 chr2 116620905 116620975 -136635608 - L2 LINE L2 -55 3258 3181 2187 111 40 0 chr2 116621696 116621993 -136634590 + AluSx SINE Alu 2 310 -2 266 284 147 9 chr2 116623066 116623175 -136633408 + L2 LINE L2 3148 3271 -1 2250 110 10 0 chr2 116623574 116623875 -136632708 - AluSq SINE Alu -9 304 1 477 221 101 10 chr2 116623875 116624074 -136632509 - MER20B DNA MER1_type -24 759 543 1041 106 33 0 chr2 116624488 116624639 -136631944 + AluJb SINE Alu 7 162 -150 21 71 0 0 chr2 116624918 116624960 -136631623 + GC_rich Low_complexity Low_complexity 1 42 0 343 250 158 43 chr2 116625634 116625798 -136630785 + MIR SINE MIR 43 225 -37 205 83 0 28 chr2 116626520 116626556 -136630027 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 724 264 112 0 chr2 116627171 116627368 -136629215 + MIR SINE MIR 4 222 -40 2313 106 3 0 chr2 116628194 116628495 -136628088 + AluSp SINE Alu 1 302 -11 535 270 32 0 chr2 116628509 116628649 -136627934 - MIR SINE MIR -18 244 100 295 226 274 0 chr2 116630552 116630636 -136625947 + MER5A DNA MER1_type 80 186 -3 216 169 65 91 chr2 116630574 116630651 -136625932 - MER5A DNA MER1_type -113 76 2 * 590 275 161 14 chr2 116630783 116630994 -136625589 + MIR SINE MIR 15 256 -6 2096 152 0 0 chr2 116631021 116631331 -136625252 - AluSx SINE Alu -2 310 1 1809 161 0 0 chr2 116631346 116631655 -136624928 - AluJb SINE Alu 0 309 1 313 238 0 0 chr2 116632004 116632067 -136624516 - L1MC4 LINE L1 -1339 6703 6641 28 0 0 0 chr2 116632557 116632585 -136623998 + AT_rich Low_complexity Low_complexity 1 28 0 2230 114 0 7 chr2 116632592 116632891 -136623692 + AluSp SINE Alu 2 298 -15 993 146 61 18 chr2 116632891 116633056 -136623527 + AluSg/x SINE Alu 134 305 -7 279 0 0 0 chr2 116633172 116633203 -136623380 + (CA)n Simple_repeat Simple_repeat 2 32 0 238 254 15 30 chr2 116635724 116635791 -136620792 - Charlie8 DNA MER1_type -2347 70 5 269 355 65 7 chr2 116636668 116636823 -136619760 - MIR SINE MIR -79 183 20 1109 171 25 5 chr2 116636911 116637110 -136619473 - MLT1A1 LTR MaLR 0 365 163 738 253 74 0 chr2 116637211 116637413 -136619170 - Tigger6 DNA MER2_type -437 1160 944 2112 131 10 3 chr2 116637525 116637831 -136618752 + AluSx SINE Alu 1 308 -4 2212 84 0 0 chr2 116637831 116638104 -136618479 + AluY SINE Alu 39 311 0 399 301 88 7 chr2 116638105 116638196 -136618387 + L1M4 LINE L1 3035 3117 -3029 2089 104 4 0 chr2 116638196 116638466 -136618117 + AluSg SINE Alu 1 271 -39 399 301 88 7 chr2 116638466 116638670 -136617913 + L1M4 LINE L1 3117 3354 -2792 441 271 114 7 chr2 116639208 116639348 -136617235 + L1ME4a LINE L1 5955 6109 -12 204 40 0 0 chr2 116639391 116639416 -136617167 + (A)n Simple_repeat Simple_repeat 1 25 0 1530 189 17 14 chr2 116639606 116639897 -136616686 + AluJb SINE Alu 2 293 -19 205 364 7 7 chr2 116641334 116641485 -136615098 + (TG)n Simple_repeat Simple_repeat 2 152 0 252 291 146 41 chr2 116643008 116643228 -136613355 - L2 LINE L2 -466 2848 2606 258 182 52 65 chr2 116643487 116643541 -136613042 - MER46C DNA MER2_type 0 338 283 2279 95 0 7 chr2 116643541 116643850 -136612733 - AluSq SINE Alu 0 307 1 258 182 52 65 chr2 116643850 116643871 -136612712 - MER46C DNA MER2_type -55 283 263 682 176 42 8 chr2 116643874 116643993 -136612590 - FLAM_A SINE Alu -10 123 1 561 209 38 51 chr2 116644052 116644210 -136612373 - MER46C DNA MER2_type -105 233 78 2009 154 3 0 chr2 116644769 116645075 -136611508 + AluSx SINE Alu 1 307 -5 573 243 63 16 chr2 116645080 116645269 -136611314 + L1ME3 LINE L1 5668 5865 -297 2336 92 0 3 chr2 116646049 116646343 -136610240 - AluSx SINE Alu -19 293 1 611 203 128 134 chr2 116646683 116647175 -136609408 - L1ME4a LINE L1 -3 6118 5630 2017 133 4 0 chr2 116647316 116647594 -136608989 - AluSq SINE Alu -12 301 23 514 284 65 39 chr2 116647731 116647963 -136608620 - MLT1I LTR MaLR -18 391 154 2183 122 0 0 chr2 116648444 116648752 -136607831 - AluSx SINE Alu 0 308 1 500 250 74 0 chr2 116650119 116650267 -136606316 + MER103 DNA DNA 6 164 -2 388 300 27 0 chr2 116650691 116650801 -136605782 + L2 LINE L2 3200 3312 -1 2022 133 0 37 chr2 116650912 116651235 -136605348 + AluSq SINE Alu 1 311 -2 2249 119 0 0 chr2 116651259 116651561 -136605022 + AluSx SINE Alu 1 302 -10 449 224 0 0 chr2 116651619 116651726 -136604857 + L1MC1 LINE L1 5176 5282 -864 1361 186 115 4 chr2 116651726 116651978 -136604605 + AluJo SINE Alu 1 280 -32 363 180 0 0 chr2 116651995 116652056 -136604527 + L1MC1 LINE L1 5272 5332 -2453 701 141 8 16 chr2 116652056 116652177 -136604406 + FLAM_C SINE Alu 2 121 -22 1196 177 0 41 chr2 116652303 116652546 -136604037 + AluJo SINE Alu 65 297 -15 5960 145 20 27 chr2 116652549 116652947 -136603636 + L1MC1 LINE L1 5312 5711 -2074 1700 183 0 0 chr2 116652947 116653242 -136603341 + AluJo SINE Alu 1 295 -17 5960 145 20 27 chr2 116653242 116653876 -136602707 + L1MC1 LINE L1 5711 7784 -1 261 111 0 0 chr2 116653891 116653927 -136602656 + Alu SINE Alu 5 40 -263 * 277 224 0 0 chr2 116653916 116653965 -136602618 + MER45 DNA AcHobo 1531 1579 -2 2143 170 79 54 chr2 116654020 116654212 -136602371 + MER66A LTR ERV1 27 213 -265 1853 101 65 4 chr2 116654212 116654488 -136602095 + AluSx SINE Alu 1 293 -19 2143 170 79 54 chr2 116654488 116654736 -136601847 + MER66A LTR ERV1 213 478 0 1983 240 81 11 chr2 116654737 116655345 -136601238 + L1MD3 LINE L1 7161 7982 0 1512 223 105 65 chr2 116655462 116655783 -136600800 + L1MC4a LINE L1 5256 5563 -2245 1484 189 37 17 chr2 116655783 116656079 -136600504 + AluJo SINE Alu 1 302 -10 1512 223 105 65 chr2 116656079 116656287 -136600296 + L1MC4a LINE L1 5563 5818 -1990 1564 211 25 11 chr2 116656287 116656643 -136599940 + L1MA10 LINE L1 5974 6334 0 1512 223 105 65 chr2 116656643 116656768 -136599815 + L1MC4a LINE L1 5818 5937 -1871 5148 129 21 25 chr2 116656772 116657645 -136598938 + L1PA16 LINE L1 5289 6157 -9 408 285 140 13 chr2 116657648 116657876 -136598707 + L1MC4a LINE L1 5918 6174 -1634 2027 109 0 3 chr2 116658131 116658425 -136598158 - AluSx SINE Alu -19 293 1 200 83 0 28 chr2 116658476 116658512 -136598071 + (GGGA)n Simple_repeat Simple_repeat 4 38 0 756 292 68 32 chr2 116658542 116658922 -136597661 + L1MC4a LINE L1 5536 5929 -1879 3369 153 18 37 chr2 116659067 116659118 -136597465 - L1MB3 LINE L1 -2 6181 6131 2354 66 3 0 chr2 116659118 116659419 -136597164 - AluY SINE Alu -9 302 1 3369 153 18 37 chr2 116659419 116659725 -136596858 - L1MB3 LINE L1 -52 6131 5839 1864 106 79 7 chr2 116659725 116660017 -136596566 - AluSq SINE Alu 0 313 1 3369 153 18 37 chr2 116660017 116660310 -136596273 - L1MB3 LINE L1 -344 5839 5542 646 218 20 14 chr2 116660314 116660461 -136596122 + FRAM SINE Alu 13 160 -16 337 139 115 0 chr2 116660465 116660533 -136596050 - L1PA8A LINE L1 -572 5559 5485 1942 69 4 0 chr2 116660656 116660903 -136595680 + AluSx SINE Alu 54 301 -11 979 127 0 20 chr2 116660907 116661057 -136595526 + AluSg/x SINE Alu 136 282 -28 231 36 0 0 chr2 116661071 116661099 -136595484 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 1984 124 3 0 chr2 116661521 116661819 -136594764 + AluSx SINE Alu 1 299 -13 262 368 21 0 chr2 116662194 116662289 -136594294 - MIR SINE MIR -129 133 37 332 291 108 13 chr2 116663818 116663976 -136592607 + L1ME4a LINE L1 5657 5829 -1979 460 268 63 63 chr2 116664349 116664554 -136592029 + LTR67 LTR ERVL 5 209 -348 983 116 0 7 chr2 116664557 116664704 -136591879 + AluJb SINE Alu 87 232 -80 410 259 139 73 chr2 116664748 116665065 -136591518 + LTR67 LTR ERVL 220 557 0 2469 53 0 3 chr2 116665110 116665413 -136591170 - AluY SINE Alu -9 302 1 322 239 35 99 chr2 116665563 116665705 -136590878 + L1ME4a LINE L1 5976 6108 -13 24 32 0 0 chr2 116665705 116665736 -136590847 + AT_rich Low_complexity Low_complexity 1 31 0 303 109 65 0 chr2 116665859 116665905 -136590678 - MER30B DNA MER1_type -136 54 6 2147 90 3 3 chr2 116666076 116666364 -136590219 - AluSq SINE Alu -18 295 8 441 234 212 0 chr2 116666423 116666560 -136590023 - HAL1 LINE L1 -34 2473 2308 704 179 172 13 chr2 116666697 116666848 -136589735 + MER20 DNA MER1_type 45 219 0 1445 217 35 6 chr2 116666987 116667301 -136589282 + Tigger6 DNA MER2_type 2 324 -1273 1407 130 4 87 chr2 116667447 116667611 -136588972 - AluSx SINE Alu -15 297 164 2172 123 0 0 chr2 116667611 116667920 -136588663 - AluSg SINE Alu -1 309 1 1407 130 4 87 chr2 116667920 116668031 -136588552 - AluSx SINE Alu -148 164 45 651 133 0 0 chr2 116668031 116668121 -136588462 - AluS SINE Alu -222 91 2 2071 106 7 3 chr2 116668198 116668501 -136588082 - AluSg SINE Alu -6 304 1 1908 143 0 0 chr2 116668951 116669251 -136587332 + AluSx SINE Alu 1 300 -12 23 0 0 0 chr2 116669283 116669306 -136587277 + AT_rich Low_complexity Low_complexity 1 23 0 321 78 22 11 chr2 116670227 116670280 -136586303 - Alu SINE Alu -257 44 1 21 36 0 0 chr2 116670538 116670566 -136586017 + AT_rich Low_complexity Low_complexity 1 28 0 792 192 245 0 chr2 116670965 116671173 -136585410 - MIR SINE MIR -2 260 2 216 217 22 0 chr2 116671665 116671711 -136584872 + (TATATG)n Simple_repeat Simple_repeat 1 47 0 498 217 113 0 chr2 116672168 116672283 -136584300 + MER94 DNA DNA 6 133 -1 248 122 82 0 chr2 116672311 116672360 -136584223 + L1MC1 LINE L1 6281 6333 0 * 2029 156 0 33 chr2 116672355 116672715 -136583868 + L1MB7 LINE L1 5813 6160 -24 1611 175 7 7 chr2 116673763 116674055 -136582528 + AluSx SINE Alu 1 292 -20 1191 102 0 12 chr2 116674838 116675004 -136581579 - AluSq SINE Alu -67 246 83 2006 129 0 3 chr2 116675957 116676259 -136580324 - AluSg SINE Alu -9 301 1 247 297 0 0 chr2 116676520 116676584 -136579999 + MIR SINE MIR 125 188 -74 376 172 17 60 chr2 116676669 116676785 -136579798 - L1MC4a LINE L1 -1587 6221 6111 788 142 7 21 chr2 116676790 116676931 -136579652 + FLAM_C SINE Alu 4 142 -1 241 264 92 52 chr2 116676947 116677071 -136579512 - L1MC4a LINE L1 -1736 6072 5938 2323 72 7 0 chr2 116677071 116677375 -136579208 + AluY SINE Alu 1 306 -5 241 264 92 52 chr2 116677375 116677424 -136579159 - L1MC4a LINE L1 -1870 5938 5892 675 37 0 0 chr2 116677849 116677931 -136578652 + (TCTA)n Simple_repeat Simple_repeat 4 85 0 197 260 20 0 chr2 116678402 116678452 -136578131 + MIR3 SINE MIR 109 159 -49 2082 132 0 0 chr2 116679263 116679567 -136577016 - AluSx SINE Alu -8 304 1 214 291 18 0 chr2 116679581 116679636 -136576947 + L2 LINE L2 3215 3270 -2 2057 94 0 75 chr2 116680392 116680723 -136575860 + AluSg SINE Alu 1 306 -4 333 303 20 41 chr2 116680863 116681064 -136575519 - L2 LINE L2 -3 3310 3094 687 147 5 211 chr2 116681312 116681460 -136575123 + MER5A DNA MER1_type 17 107 -82 1023 182 0 0 chr2 116681460 116681625 -136574958 - FAM SINE Alu -10 165 1 687 147 5 211 chr2 116681625 116681694 -136574889 + MER5A DNA MER1_type 107 189 0 28 0 0 0 chr2 116681974 116682002 -136574581 + AT_rich Low_complexity Low_complexity 1 28 0 2038 106 0 11 chr2 116682016 116682299 -136574284 - AluSg SINE Alu -30 280 1 918 171 8 111 chr2 116682333 116682392 -136574191 + AluJo SINE Alu 87 150 -162 1959 106 61 3 chr2 116682392 116682685 -136573898 + AluSg SINE Alu 1 310 0 918 171 8 111 chr2 116682685 116682877 -136573706 + AluJo SINE Alu 150 312 0 246 353 25 8 chr2 116683007 116683126 -136573457 - MIR SINE MIR -34 228 108 246 304 157 17 chr2 116683097 116683212 -136573371 - MIR3 SINE MIR -69 139 9 344 266 28 9 chr2 116683262 116683371 -136573212 + HERVL LTR ERVL 2047 2157 -3607 554 259 48 0 chr2 116683987 116684153 -136572430 + HERVL LTR ERVL 2299 2472 -3292 388 298 50 37 chr2 116684156 116684398 -136572185 + HERVL LTR ERVL 4378 4622 -1032 252 282 46 22 chr2 116684498 116684607 -136571976 + LTR16A1 LTR ERVL 64 172 -278 2229 98 0 0 chr2 116684842 116685139 -136571444 + AluSc SINE Alu 1 297 -12 1656 114 0 39 chr2 116685685 116685939 -136570644 - AluSx SINE Alu -14 298 55 811 133 28 14 chr2 116685939 116686082 -136570501 - AluSq/x SINE Alu -168 145 1 1694 149 48 10 chr2 116686690 116686985 -136569598 + AluJb SINE Alu 1 306 -6 2341 79 3 0 chr2 116687269 116687572 -136569011 - AluSx SINE Alu -7 305 2 1927 103 3 48 chr2 116687573 116687885 -136568698 - AluSc SINE Alu -11 298 1 186 43 0 0 chr2 116688048 116688071 -136568512 + (CA)n Simple_repeat Simple_repeat 2 24 0 1940 139 3 3 chr2 116688563 116688858 -136567725 + AluSx SINE Alu 3 297 -15 1733 180 3 0 chr2 116689448 116689748 -136566835 + AluSx SINE Alu 1 301 -11 1972 130 3 3 chr2 116689760 116690059 -136566524 + AluSx SINE Alu 7 305 -7 340 196 84 47 chr2 116690122 116690229 -136566354 + REP3 LTR ERV 19 129 -433 1145 135 6 0 chr2 116690236 116690399 -136566184 - LTR8 LTR ERV1 0 691 528 33849 98 14 47 chr2 116690399 116692767 -136563816 + L1PA7 LINE L1 1 2445 -3709 1986 113 30 0 chr2 116692767 116693068 -136563515 + AluSg SINE Alu 1 310 0 33849 98 14 47 chr2 116693068 116696395 -136560188 + L1PA7 LINE L1 2445 5460 -694 2129 82 0 3 chr2 116696395 116696703 -136559880 + AluY SINE Alu 1 307 0 33849 98 14 47 chr2 116696703 116697376 -136559207 + L1PA7 LINE L1 5460 6154 0 2328 194 86 22 chr2 116697388 116697944 -136558639 - LTR8A LTR ERV1 -135 592 1 428 238 19 9 chr2 116697966 116698071 -136558512 + REP3 LTR ERV 201 306 -256 1294 124 135 77 chr2 116698071 116698345 -136558238 + AluSx SINE Alu 1 290 -22 282 180 0 0 chr2 116698347 116698408 -136558175 + GA-rich Low_complexity Low_complexity 2 62 0 824 172 6 0 chr2 116698414 116698588 -136557995 + G-rich Low_complexity Low_complexity 4 178 0 271 221 0 13 chr2 116698589 116698666 -136557917 + GA-rich Low_complexity Low_complexity 3 78 0 463 167 24 0 chr2 116698721 116698805 -136557778 - MLT1E1 LTR MaLR -565 89 4 702 238 117 29 chr2 116698826 116699066 -136557517 + REP3 LTR ERV 279 539 -23 1282 320 64 45 chr2 116699134 116699825 -136556758 + HERV16 LTR ERVL 799 1507 -3489 2076 105 0 14 chr2 116699825 116700120 -136556463 + AluSx SINE Alu 1 291 -21 1282 320 64 45 chr2 116700120 116700175 -136556408 + HERV16 LTR ERVL 1507 1559 -3437 1159 254 136 3 chr2 116700215 116700554 -136556029 + HERV16 LTR ERVL 1691 2074 -2922 2043 171 79 8 chr2 116700555 116700923 -136555660 - MER68 LTR ERV1 -168 394 1 338 268 56 6 chr2 116700925 116701108 -136555475 + L1MDa LINE L1 1871 2069 -4471 1015 83 0 0 chr2 116701296 116701428 -136555155 + AluSq/x SINE Alu 1 132 -180 915 309 45 18 chr2 116701428 116702202 -136554381 - HERVL LTR ERVL -1736 3918 3091 1243 317 52 5 chr2 116702431 116702876 -136553707 - HERVL LTR ERVL -3007 2757 2292 871 341 54 10 chr2 116702909 116703319 -136553264 - HERVL LTR ERVL -3539 2225 1798 2214 117 3 0 chr2 116703325 116703624 -136552959 - AluSx SINE Alu -12 300 1 408 348 19 19 chr2 116703762 116703972 -136552611 - HERVL LTR ERVL -4122 1642 1433 407 232 24 8 chr2 116704036 116704109 -136552474 + L1MC4 LINE L1 7848 7925 -117 1513 174 49 30 chr2 116704109 116704414 -136552169 + AluJo SINE Alu 1 311 -1 407 232 24 8 chr2 116704414 116704465 -136552118 + L1MC4 LINE L1 7925 7974 -68 1999 112 50 0 chr2 116704501 116704779 -136551804 + AluSg SINE Alu 1 292 -18 2413 81 0 0 chr2 116705857 116706153 -136550430 + AluSg SINE Alu 1 296 -14 2392 91 0 0 chr2 116706541 116706838 -136549745 + AluSq SINE Alu 1 297 -16 877 141 0 0 chr2 116707087 116707215 -136549368 - FLAM_C SINE Alu -5 128 1 2382 87 19 7 chr2 116707236 116707545 -136549038 - AluSp SINE Alu 0 313 1 1929 163 36 0 chr2 116707554 116707855 -136548728 - AluSx SINE Alu 0 312 1 283 306 99 0 chr2 116707869 116707980 -136548603 - L1MC/D LINE L1 -2305 5503 5382 720 259 32 33 chr2 116708010 116708339 -136548244 - MLT1I LTR MaLR 0 549 69 1388 135 54 9 chr2 116708448 116708670 -136547913 - AluSp SINE Alu -9 304 73 342 0 0 0 chr2 116708670 116708708 -136547875 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 2183 110 0 3 chr2 116708708 116708990 -136547593 - AluSx SINE Alu -30 282 2 1880 140 0 11 chr2 116709307 116709586 -136546997 - AluSx SINE Alu -36 276 1 2417 82 0 3 chr2 116709746 116710040 -136546543 + AluSc SINE Alu 1 293 -16 1998 143 6 13 chr2 116710254 116710568 -136546015 + AluSx SINE Alu 1 312 0 1819 156 22 0 chr2 116710845 116711150 -136545433 + AluSx SINE Alu 1 311 0 442 144 216 10 chr2 116711725 116711822 -136544761 + LTR16C LTR ERVL 374 490 -1 479 225 104 45 chr2 116711848 116712070 -136544513 + L1M4 LINE L1 2691 2925 -3221 565 278 94 14 chr2 116712321 116712342 -136544241 + L1M4 LINE L1 3012 3030 -3116 2529 80 0 0 chr2 116712342 116712653 -136543930 + AluY SINE Alu 1 311 0 565 278 94 14 chr2 116712653 116712745 -136543838 + L1M4 LINE L1 3030 3113 -3033 2185 96 0 0 chr2 116712745 116713016 -136543567 + AluSg SINE Alu 1 271 -39 565 278 94 14 chr2 116713016 116713253 -136543330 + L1M4 LINE L1 3113 3391 -2755 1183 183 92 20 chr2 116713255 116713559 -136543024 - MSTC LTR MaLR 0 428 66 480 236 60 18 chr2 116713592 116713809 -136542774 + MLT1H LTR MaLR 1 300 -249 2211 165 51 14 chr2 116714004 116714417 -136542166 + LTR3 LTR ERVK 5 432 0 1363 256 82 6 chr2 116714942 116715306 -136541277 + LTR16C LTR ERVL 98 489 -2 1075 96 0 0 chr2 116715324 116715459 -136541124 + AluSq/x SINE Alu 1 135 -178 2437 105 0 0 chr2 116715459 116715772 -136540811 + AluSq SINE Alu 1 313 0 881 162 7 19 chr2 116715967 116716121 -136540462 + FRAM SINE Alu 1 151 -25 2316 76 6 22 chr2 116716131 116716447 -136540136 + AluY SINE Alu 1 311 0 25 0 0 0 chr2 116716447 116716472 -136540111 + AT_rich Low_complexity Low_complexity 1 25 0 204 254 82 52 chr2 116717430 116717453 -136539130 - L2 LINE L2 -578 2736 2715 2406 87 0 7 chr2 116717453 116717753 -136538830 - AluSx SINE Alu -14 298 1 204 254 82 52 chr2 116717753 116717863 -136538720 - L2 LINE L2 -599 2715 2599 308 261 176 5 chr2 116718218 116718406 -136538177 - L2 LINE L2 -212 3060 2841 495 189 57 25 chr2 116718755 116718877 -136537706 - MER106A DNA MER1_type -1 235 110 468 313 135 19 chr2 116718934 116719350 -136537233 - L2 LINE L2 -431 2883 2420 2025 145 10 0 chr2 116719841 116720144 -136536439 - AluJo SINE Alu -5 307 2 568 178 248 62 chr2 116722517 116722756 -136533827 + LTR48 LTR ERV1 1 287 -500 1114 155 29 19 chr2 116722756 116722963 -136533620 - MER4D LTR ERV1 0 903 695 2022 111 42 10 chr2 116722963 116723252 -136533331 + AluSx SINE Alu 1 298 -14 2492 125 35 5 chr2 116723336 116723712 -136532871 + Tigger2a DNA MER2_type 1 387 -47 2229 106 0 0 chr2 116723921 116724233 -136532350 - AluSg SINE Alu 0 312 1 927 187 0 7 chr2 116724313 116724463 -136532120 + AluJo SINE Alu 1 149 -163 823 251 167 8 chr2 116724465 116724967 -136531616 + L1MD2 LINE L1 61 679 -5717 560 244 69 14 chr2 116725048 116725265 -136531318 + L1MD2 LINE L1 1924 2152 -4244 1679 151 27 0 chr2 116725294 116725553 -136531030 - AluJo SINE Alu -46 266 1 4569 170 64 44 chr2 116725553 116726177 -136530406 + L1MD2 LINE L1 4912 5522 -906 733 81 10 0 chr2 116726177 116726276 -136530307 + HY3 scRNA scRNA 1 100 -1 4569 170 64 44 chr2 116726276 116726489 -136530094 + L1MD2 LINE L1 5522 5729 -699 839 150 201 127 chr2 116726489 116726523 -136530060 + MER44D DNA MER2_type 2 32 -2459 2295 112 0 3 chr2 116726523 116726836 -136529747 - AluSx SINE Alu 0 312 1 839 150 201 127 chr2 116726836 116727115 -136529468 + MER44D DNA MER2_type 32 608 -1 4569 170 64 44 chr2 116727115 116727639 -136528944 + L1MD2 LINE L1 5729 6292 -136 1722 158 63 0 chr2 116727909 116728194 -136528389 - AluJb SINE Alu -9 303 1 1660 145 28 46 chr2 116728213 116728496 -136528087 - AluJb SINE Alu -30 282 5 537 122 0 0 chr2 116728902 116728976 -136527607 + AluS SINE Alu 2 75 -237 623 228 0 0 chr2 116728983 116729097 -136527486 - FLAM_A SINE Alu -19 114 1 2371 130 65 73 chr2 116729100 116729594 -136526989 + L1MA10 LINE L1 5843 6332 -2 334 164 68 0 chr2 116729600 116729673 -136526910 + Charlie5 DNA MER1_type 2535 2612 0 1876 188 0 7 chr2 116731016 116731324 -136525259 - AluJb SINE Alu -6 306 1 1929 143 10 3 chr2 116731617 116731924 -136524659 + AluJb SINE Alu 1 309 -3 2352 96 0 0 chr2 116732359 116732688 -136523895 + AluSx SINE Alu 1 329 0 260 269 81 45 chr2 116733265 116733488 -136523095 + L1ME2 LINE L1 5726 5956 -208 1061 228 120 153 chr2 116733777 116734682 -136521901 + L1ME LINE L1 147 1080 -5033 2357 115 0 3 chr2 116734682 116734994 -136521589 + AluSx SINE Alu 1 311 -1 1061 228 120 153 chr2 116734994 116735022 -136521561 + L1ME LINE L1 1080 1107 -5006 1693 156 94 6 chr2 116735022 116735342 -136521241 + MER7A DNA MER2_type 1 346 0 1061 228 120 153 chr2 116735342 116735414 -136521169 + L1ME LINE L1 1107 1010 -5103 2109 138 3 0 chr2 116735414 116735711 -136520872 + AluSx SINE Alu 1 298 -14 1061 228 120 153 chr2 116735711 116735882 -136520701 + L1ME LINE L1 1009 1184 -4929 2344 97 3 0 chr2 116735903 116736203 -136520380 + AluSx SINE Alu 1 301 -11 938 259 20 23 chr2 116736223 116736528 -136520055 + L1ME LINE L1 1513 1816 -4580 680 223 98 59 chr2 116736547 116736834 -136519749 + L1MC4 LINE L1 7486 7783 -259 2152 112 20 0 chr2 116738086 116738380 -136518203 + AluJb SINE Alu 1 300 -12 261 0 0 0 chr2 116738437 116738466 -136518117 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1044 165 15 20 chr2 116738478 116738697 -136517886 + L1MA9 LINE L1 5952 6152 -158 1829 121 0 0 chr2 116738777 116739026 -136517557 + AluSx SINE Alu 49 297 -15 593 144 99 0 chr2 116739026 116739137 -136517446 + L1MB3 LINE L1 6004 6125 -58 * 1197 228 79 50 chr2 116739133 116739577 -136517006 + L1MC4 LINE L1 6968 7424 -618 1033 140 35 12 chr2 116739629 116739800 -136516783 + AluSx SINE Alu 23 197 -115 1367 130 19 0 chr2 116739824 116740032 -136516551 + MER21B LTR ERV1 112 323 -540 921 190 11 17 chr2 116740037 116740216 -136516367 + AluJb SINE Alu 135 312 0 814 278 75 12 chr2 116740217 116740537 -136516046 + L1MC4 LINE L1 7696 8035 -7 724 193 10 46 chr2 116740516 116740713 -136515870 + L1M3 LINE L1 5600 5789 -391 * 924 147 19 6 chr2 116741563 116741720 -136514863 + Tigger1 DNA MER2_type 93 251 -2167 * 3657 110 106 65 chr2 116741717 116741851 -136514732 + Tigger1 DNA MER2_type 1699 1826 -592 1975 136 17 14 chr2 116741851 116742145 -136514438 - AluJo SINE Alu -16 296 2 3657 110 106 65 chr2 116742145 116742407 -136514176 + Tigger1 DNA MER2_type 1826 2076 -342 2658 48 0 3 chr2 116742407 116742717 -136513866 + AluY SINE Alu 1 309 -2 3657 110 106 65 chr2 116742717 116742733 -136513850 + Tigger1 DNA MER2_type 2076 2090 -328 2310 96 10 10 chr2 116742733 116743046 -136513537 + AluSp SINE Alu 1 313 0 3657 110 106 65 chr2 116743046 116743323 -136513260 + Tigger1 DNA MER2_type 2090 2418 0 1040 221 101 16 chr2 116743494 116743752 -136512831 - MER82 DNA MER2_type 0 653 374 856 123 0 0 chr2 116743796 116743910 -136512673 + FLAM_C SINE Alu 7 120 -23 242 28 0 28 chr2 116743910 116743946 -136512637 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1553 188 94 9 chr2 116743947 116744276 -136512307 - MER82 DNA MER2_type -296 357 1 2095 126 0 27 chr2 116744686 116744987 -136511596 - AluSx SINE Alu -19 293 1 605 198 0 25 chr2 116745493 116745614 -136510969 - FRAM SINE Alu -4 172 55 2536 71 0 0 chr2 116745832 116746143 -136510440 + AluY SINE Alu 1 311 0 1906 163 3 0 chr2 116746844 116747144 -136509439 + AluJb SINE Alu 1 301 -11 966 189 6 0 chr2 116747185 116747344 -136509239 - AluJb SINE Alu -16 296 137 21 0 0 0 chr2 116747863 116747884 -136508699 + AT_rich Low_complexity Low_complexity 1 21 0 1308 152 80 62 chr2 116747891 116748180 -136508403 + AluJb SINE Alu 1 294 -18 1481 132 0 54 chr2 116748441 116748530 -136508053 + L1MA5 LINE L1 6036 6128 -172 1524 143 4 13 chr2 116748530 116748760 -136507823 - AluJo SINE Alu -84 228 1 1481 132 0 54 chr2 116748760 116748950 -136507633 + L1MA5 LINE L1 6128 6300 0 1755 150 0 36 chr2 116750095 116750401 -136506182 - AluJb SINE Alu -15 297 3 1499 170 29 56 chr2 116750403 116750572 -136506011 - AluJb SINE Alu -10 302 143 1910 165 0 0 chr2 116750572 116750863 -136505720 - AluSx SINE Alu -21 291 1 1499 170 29 56 chr2 116750863 116750999 -136505584 - AluJb SINE Alu -169 143 5 2344 100 0 0 chr2 116751329 116751629 -136504954 + AluSx SINE Alu 1 300 -12 1031 101 0 0 chr2 116751634 116751763 -136504820 + AluSq/x SINE Alu 1 129 -184 1031 211 37 11 chr2 116751879 116752145 -136504438 + MER82 DNA MER2_type 1 372 -281 1421 170 0 5 chr2 116752148 116752371 -136504212 + AluJb SINE Alu 1 222 -90 1324 243 21 0 chr2 116752389 116752673 -136503910 + MER82 DNA MER2_type 362 651 -2 470 234 63 0 chr2 116753209 116753320 -136503263 - MER3 DNA MER1_type -53 156 39 441 191 232 36 chr2 116753327 116753547 -136503036 + L1MC4 LINE L1 7779 8041 -1 1879 206 98 54 chr2 116754144 116754663 -136501920 + MLT1F LTR MaLR 1 542 0 321 257 0 0 chr2 116755021 116755095 -136501488 - MER20 DNA MER1_type -144 75 2 341 342 125 16 chr2 116755385 116755569 -136501014 + L3 LINE CR1 1356 1559 -18 1104 142 102 64 chr2 116755772 116756067 -136500516 - L1MA9 LINE L1 -20 6292 5987 928 148 0 15 chr2 116756124 116756259 -136500324 + FLAM_C SINE Alu 1 133 0 2495 71 0 0 chr2 116756849 116757157 -136499426 + AluY SINE Alu 1 308 -3 587 272 88 18 chr2 116757304 116757521 -136499062 - MIR SINE MIR -3 259 28 827 176 18 29 chr2 116757691 116757861 -136498722 - AluJb SINE Alu -11 301 134 2686 42 0 6 chr2 116758898 116759211 -136497372 + AluY SINE Alu 1 311 0 363 211 66 0 chr2 116759286 116759362 -136497221 - L2 LINE L2 -24 3289 3209 279 206 265 22 chr2 116759746 116759816 -136496767 + Charlie1 DNA MER1_type 476 528 -2233 1838 164 3 20 chr2 116759816 116760114 -136496469 + AluJo SINE Alu 1 293 -19 279 206 265 22 chr2 116760114 116760179 -136496404 + Charlie1 DNA MER1_type 528 644 -2117 1255 174 140 0 chr2 116760189 116760424 -136496159 + MER82 DNA MER2_type 1 268 -385 1847 198 151 40 chr2 116760426 116760897 -136495686 + MER82 DNA MER2_type 131 653 0 767 161 75 70 chr2 116760923 116761109 -136495474 + Charlie1 DNA MER1_type 691 877 -1884 * 982 140 155 5 chr2 116761108 116761315 -136495268 + Charlie1 DNA MER1_type 2365 2602 -159 2194 103 7 3 chr2 116761320 116761612 -136494971 - AluSx SINE Alu -19 293 1 1779 154 10 20 chr2 116761660 116761958 -136494625 - AluJo SINE Alu -17 295 1 443 264 47 0 chr2 116764048 116764196 -136492387 - L1MA10 LINE L1 -5 6329 6175 632 109 10 40 chr2 116764295 116764396 -136492187 - AluJ/FLAM SINE Alu -213 99 2 6542 192 54 62 chr2 116764405 116764622 -136491961 - L1M4 LINE L1 -858 5786 5569 1345 155 40 28 chr2 116764622 116764873 -136491710 - L1MA3 LINE L1 -9 6296 6043 6542 192 54 62 chr2 116764873 116765312 -136491271 - L1M4 LINE L1 -1075 5569 5128 2025 126 68 0 chr2 116765312 116765605 -136490978 - AluSq SINE Alu 0 313 1 6542 192 54 62 chr2 116765605 116766416 -136490167 - L1M4 LINE L1 -1516 5128 4313 1543 118 10 94 chr2 116766416 116766625 -136489958 - L1PA16 LINE L1 0 6166 5941 2336 87 13 0 chr2 116766625 116766925 -136489658 - AluY SINE Alu -7 304 1 1543 118 10 94 chr2 116766925 116766970 -136489613 - L1PA16 LINE L1 -225 5941 5936 1736 169 3 10 chr2 116766970 116767266 -136489317 - AluSx SINE Alu -18 294 1 1543 118 10 94 chr2 116767266 116767298 -136489285 - L1PA16 LINE L1 -230 5936 5903 6542 192 54 62 chr2 116767298 116767632 -136488951 - L1M4 LINE L1 -2331 4313 3996 2043 215 28 0 chr2 116767699 116768127 -136488456 - L1M4 LINE L1 -3317 3327 2888 4976 127 27 22 chr2 116768127 116768380 -136488203 + L1PA16 LINE L1 5359 5609 -557 2158 101 0 0 chr2 116768380 116768657 -136487926 + AluSx SINE Alu 1 277 -35 216 0 0 0 chr2 116768659 116768683 -136487900 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 4976 127 27 22 chr2 116768683 116769229 -136487354 + L1PA16 LINE L1 5609 6165 -1 777 215 0 0 chr2 116769225 116769388 -136487195 - L1M4 LINE L1 -3747 2897 2735 * 735 206 0 15 chr2 116769389 116769520 -136487063 + FLAM_A SINE Alu 1 129 -4 1557 111 14 0 chr2 116769526 116769743 -136486840 + L1MA3 LINE L1 5673 5892 -413 982 232 0 5 chr2 116769755 116769962 -136486621 + AluJo SINE Alu 101 306 -6 860 197 52 31 chr2 116769962 116770252 -136486331 - L1M4 LINE L1 -3900 2746 2451 * 1268 232 24 40 chr2 116770251 116770674 -136485909 - L1M4 LINE L1 -4850 1692 1277 294 199 23 38 chr2 116770676 116770807 -136485776 + CT-rich Low_complexity Low_complexity 4 132 0 201 143 0 29 chr2 116770808 116770843 -136485740 + (TCCC)n Simple_repeat Simple_repeat 2 35 0 2757 228 80 17 chr2 116770844 116771410 -136485173 - L1M4 LINE L1 -5802 740 122 2323 62 3 14 chr2 116771410 116771701 -136484882 - AluY SINE Alu -3 308 21 2757 228 80 17 chr2 116771701 116771824 -136484759 - L1M4 LINE L1 -6420 122 8 1795 169 126 14 chr2 116771929 116772285 -136484298 + MSTD LTR MaLR 1 396 0 555 190 348 0 chr2 116772939 116773097 -136483486 + MER58C DNA MER1_type 3 215 0 804 178 125 0 chr2 116773125 116773277 -136483306 - AluJb SINE Alu -10 302 132 324 248 10 69 chr2 116774168 116774269 -136482314 - MER5B DNA MER1_type -79 99 5 252 319 50 53 chr2 116774301 116774452 -136482131 - MIR SINE MIR -63 145 43 1067 177 0 6 chr2 116774617 116774781 -136481802 + FAM SINE Alu 1 163 -12 73 23 0 0 chr2 116774781 116774868 -136481715 + AT_rich Low_complexity Low_complexity 1 87 0 2005 135 0 14 chr2 116777145 116777442 -136479141 - AluJo SINE Alu -18 294 2 29571 46 3 6 chr2 116777524 116781963 -136474620 + L1PA5 LINE L1 1727 6151 -3 306 67 0 0 chr2 116782387 116782432 -136474151 + (CA)n Simple_repeat Simple_repeat 2 46 0 201 74 0 0 chr2 116782577 116782604 -136473979 + (TGG)n Simple_repeat Simple_repeat 1 27 0 558 319 222 18 chr2 116782628 116783775 -136472808 - L2 LINE L2 -417 2897 1517 276 321 86 52 chr2 116783824 116784092 -136472491 + L2 LINE L2 2966 3242 -30 1872 135 7 40 chr2 116784833 116785137 -136471446 - AluJb SINE Alu -18 294 1 2470 81 3 0 chr2 116785605 116785912 -136470671 - AluSp SINE Alu -5 308 1 189 0 0 0 chr2 116786189 116786210 -136470373 + (A)n Simple_repeat Simple_repeat 1 21 0 198 298 12 36 chr2 116786443 116786527 -136470056 + MIR SINE MIR 177 258 -4 2177 128 3 0 chr2 116786786 116787098 -136469485 + AluSq SINE Alu 1 313 0 21 36 0 0 chr2 116787342 116787370 -136469213 + AT_rich Low_complexity Low_complexity 1 28 0 1811 111 0 102 chr2 116787482 116787807 -136468776 + AluSx SINE Alu 1 292 -20 1736 138 7 31 chr2 116787811 116788100 -136468483 - AluJb SINE Alu -30 282 1 22 56 0 0 chr2 116788102 116788138 -136468445 + AT_rich Low_complexity Low_complexity 1 36 0 2059 141 0 3 chr2 116788212 116788517 -136468066 + AluSx SINE Alu 1 304 -8 207 0 0 0 chr2 116788581 116788604 -136467979 + (T)n Simple_repeat Simple_repeat 1 23 0 394 240 146 94 chr2 116788966 116789082 -136467501 + L1ME3 LINE L1 4747 4855 -1291 2282 109 0 0 chr2 116789082 116789367 -136467216 - AluSg SINE Alu -25 285 1 394 240 146 94 chr2 116789367 116789517 -136467066 + L1ME3 LINE L1 4855 5027 -1119 * 1319 254 79 32 chr2 116789514 116789761 -136466822 + L1ME3 LINE L1 5738 6015 -147 2145 92 3 3 chr2 116789761 116790095 -136466488 - AluY SINE Alu 0 334 1 1319 254 79 32 chr2 116790095 116790251 -136466332 + L1ME3 LINE L1 6015 6162 0 498 241 12 1 chr2 116790368 116790536 -136466047 - MER58 DNA MER1_type 0 2420 26 637 292 68 54 chr2 116790678 116791366 -136465217 + L1MEc LINE L1 1011 1713 -4683 1958 143 10 3 chr2 116791366 116791659 -136464924 - AluSx SINE Alu -17 295 1 637 292 68 54 chr2 116791659 116791769 -136464814 + L1MEc LINE L1 1713 1820 -4576 376 259 9 0 chr2 116792085 116792201 -136464382 + (TA)n Simple_repeat Simple_repeat 2 118 0 2027 206 103 100 chr2 116792201 116793064 -136463519 + L1MDa LINE L1 1631 2490 -3936 2154 104 0 11 chr2 116793064 116793199 -136463384 + AluSp SINE Alu 1 136 -174 2494 69 0 0 chr2 116793199 116793502 -136463081 + AluY SINE Alu 1 303 -8 2154 104 0 11 chr2 116793502 116793679 -136462904 + AluSp SINE Alu 136 310 0 2027 206 103 100 chr2 116793679 116793756 -136462827 + L1MDa LINE L1 2490 2565 -3861 198 0 0 0 chr2 116793756 116793778 -136462805 + (AATAG)n Simple_repeat Simple_repeat 3 24 0 2027 206 103 100 chr2 116793778 116793890 -136462693 + L1MDa LINE L1 2565 2675 -3751 1983 146 6 19 chr2 116793890 116794205 -136462378 + AluJb SINE Alu 1 311 -1 2027 206 103 100 chr2 116794205 116794395 -136462188 + L1MDa LINE L1 2675 2863 -3563 319 53 0 0 chr2 116794395 116794433 -136462150 + U2 snRNA snRNA 1 38 -150 2027 206 103 100 chr2 116794433 116794452 -136462131 + L1MDa LINE L1 2863 2880 -3546 1720 180 37 7 chr2 116794452 116794746 -136461837 + AluJb SINE Alu 1 303 -9 2027 206 103 100 chr2 116794746 116795073 -136461510 + L1MDa LINE L1 2880 3205 -3221 1638 98 5 0 chr2 116795073 116795287 -136461296 + AluSp SINE Alu 84 298 -15 2027 206 103 100 chr2 116795287 116795332 -136461251 + L1MDa LINE L1 3205 3248 -3178 1695 192 10 7 chr2 116795332 116795629 -136460954 + AluJo SINE Alu 1 298 -14 2027 206 103 100 chr2 116795629 116795826 -136460757 + L1MDa LINE L1 3248 3558 -2868 686 114 0 0 chr2 116795827 116795915 -136460668 + AluSp SINE Alu 1 88 -224 43921 29 21 2 chr2 116795915 116801948 -136454635 + L1HS LINE L1 2 6155 0 180 0 0 0 chr2 116802082 116802102 -136454481 + (A)n Simple_repeat Simple_repeat 1 20 0 1729 84 5 0 chr2 116802102 116802316 -136454267 + AluSp SINE Alu 75 289 -24 240 35 0 0 chr2 116802354 116802383 -136454200 + (CA)n Simple_repeat Simple_repeat 2 30 0 504 274 43 0 chr2 116802384 116802548 -136454035 + L1MDa LINE L1 3557 3727 -2699 2341 100 0 0 chr2 116803105 116803404 -136453179 - AluSq SINE Alu -14 299 1 2285 93 7 3 chr2 116803873 116804173 -136452410 - AluSx SINE Alu -11 301 1 2374 157 75 38 chr2 116805049 116805151 -136451432 - L1MB7 LINE L1 -9 6175 6078 2250 99 0 7 chr2 116805151 116805468 -136451115 - AluSg SINE Alu 0 310 1 2374 157 75 38 chr2 116805468 116805868 -136450715 - L1MB7 LINE L1 -106 6078 5654 298 197 28 28 chr2 116805882 116805953 -136450630 - AluJo SINE Alu -140 162 92 2594 243 48 88 chr2 116805954 116806443 -136450140 - L1MB7 LINE L1 -824 5322 4815 1810 118 68 7 chr2 116806443 116806722 -136449861 - AluSx SINE Alu -16 296 1 2594 243 48 88 chr2 116806722 116806927 -136449656 - L1MB7 LINE L1 -1331 4815 4604 1593 100 0 5 chr2 116806927 116807137 -136449446 - AluSq SINE Alu -104 209 1 2594 243 48 88 chr2 116807137 116807419 -136449164 - L1MB7 LINE L1 -1542 4604 4390 2095 121 7 3 chr2 116807419 116807717 -136448866 - AluSq SINE Alu -14 299 1 2594 243 48 88 chr2 116807717 116807835 -136448748 - L1MB7 LINE L1 -1756 4390 4269 347 218 0 26 chr2 116807829 116807907 -136448676 - L1MC/D LINE L1 -746 5496 5421 * 22 35 0 0 chr2 116808202 116808231 -136448352 + AT_rich Low_complexity Low_complexity 1 29 0 1787 149 0 72 chr2 116808442 116808641 -136447942 + AluJb SINE Alu 1 170 -142 2404 73 0 0 chr2 116808641 116808928 -136447655 + AluY SINE Alu 3 289 -22 1787 149 0 72 chr2 116808928 116809049 -136447534 + AluJb SINE Alu 170 298 -14 408 20 0 0 chr2 116809050 116809099 -136447484 + (CA)n Simple_repeat Simple_repeat 2 50 0 34 0 0 0 chr2 116809099 116809133 -136447450 + AT_rich Low_complexity Low_complexity 1 34 0 278 263 32 11 chr2 116809246 116809341 -136447242 - L2 LINE L2 -703 2611 2515 2281 79 24 10 chr2 116809902 116810194 -136446389 - AluY SINE Alu -15 296 1 208 297 234 0 chr2 116810316 116810427 -136446156 - L2 LINE L2 0 3272 3136 1182 303 112 25 chr2 116810599 116811276 -136445307 - L2 LINE L2 -388 2926 2191 186 234 94 0 chr2 116812291 116812355 -136444228 - MIR SINE MIR -120 142 73 8939 166 105 73 chr2 116812740 116812838 -136443745 + Charlie5 DNA MER1_type 1 94 -2530 2031 123 3 43 chr2 116812838 116813017 -136443566 - AluSx SINE Alu 0 312 150 2523 44 3 3 chr2 116813017 116813310 -136443273 - AluY SINE Alu -18 293 1 2031 123 3 43 chr2 116813310 116813455 -136443128 - AluSx SINE Alu -162 150 1 8939 166 105 73 chr2 116813455 116814468 -136442115 + Charlie5 DNA MER1_type 94 1073 -1551 2202 94 0 0 chr2 116814468 116814744 -136441839 + AluY SINE Alu 1 276 -35 8939 166 105 73 chr2 116814744 116814886 -136441697 + Charlie5 DNA MER1_type 1073 1209 -1415 2339 99 3 3 chr2 116814886 116815190 -136441393 + AluSx SINE Alu 1 304 -8 8939 166 105 73 chr2 116815190 116815316 -136441267 + Charlie5 DNA MER1_type 1209 1329 -1295 1987 146 7 13 chr2 116815316 116815625 -136440958 - AluSx SINE Alu -5 307 1 8939 166 105 73 chr2 116815625 116816658 -136439925 + Charlie5 DNA MER1_type 1329 2327 -297 2340 89 0 3 chr2 116816658 116816951 -136439632 - AluSc SINE Alu -16 293 2 8939 166 105 73 chr2 116816951 116816982 -136439601 + Charlie5 DNA MER1_type 2327 2356 -268 2296 116 0 0 chr2 116816982 116817283 -136439300 - AluSx SINE Alu -11 301 1 8939 166 105 73 chr2 116817283 116817376 -136439207 + Charlie5 DNA MER1_type 2356 2624 0 388 229 48 0 chr2 116818810 116818915 -136437668 - MIR SINE MIR -37 225 116 357 230 0 35 chr2 116818925 116819012 -136437571 - MIR SINE MIR -25 237 154 1013 254 107 5 chr2 116819168 116819581 -136437002 + LTR16A1 LTR ERVL 1 455 -2 21 0 0 0 chr2 116820480 116820501 -136436082 + AT_rich Low_complexity Low_complexity 1 21 0 2190 135 0 0 chr2 116820509 116820813 -136435770 + AluSx SINE Alu 1 304 -8 2299 113 0 3 chr2 116821194 116821505 -136435078 + AluSx SINE Alu 1 310 -2 460 284 51 57 chr2 116822247 116822543 -136434040 + MLT1J LTR MaLR 22 315 -196 27 29 0 0 chr2 116823420 116823454 -136433129 + GC_rich Low_complexity Low_complexity 1 34 0 62 52 0 0 chr2 116823490 116823587 -136432996 + GC_rich Low_complexity Low_complexity 1 97 0 28 0 0 0 chr2 116823613 116823641 -136432942 + GC_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 116823655 116823679 -136432904 + GC_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr2 116823725 116823747 -136432836 + GC_rich Low_complexity Low_complexity 1 22 0 671 304 68 37 chr2 116824557 116824938 -136431645 + LTR16C LTR ERVL 98 490 -1 844 130 0 0 chr2 116825217 116825340 -136431243 - FLAM_C SINE Alu -9 124 2 327 25 0 0 chr2 116825386 116825426 -136431157 + (TG)n Simple_repeat Simple_repeat 2 41 0 1953 133 0 4 chr2 116825429 116825707 -136430876 - AluSx SINE Alu -35 277 1 309 303 17 50 chr2 116825968 116826087 -136430496 + MLT1J1 LTR MaLR 82 196 -250 1013 253 97 80 chr2 116826137 116826414 -136430169 + L1 LINE L1 2709 2980 -3166 2281 31 0 62 chr2 116826414 116826728 -136429855 - AluY SINE Alu 0 308 13 1013 253 97 80 chr2 116826728 116827079 -136429504 + L1 LINE L1 2980 3356 -2790 2384 69 7 10 chr2 116827079 116827385 -136429198 + AluSp SINE Alu 1 305 -8 1013 253 97 80 chr2 116827385 116827518 -136429065 + L1 LINE L1 3356 3485 -2661 308 194 121 151 chr2 116827520 116827726 -136428857 + L1 LINE L1 4204 4403 -1743 1415 249 50 9 chr2 116827748 116828213 -136428370 + L1M4 LINE L1 4185 4668 -1478 1043 112 0 14 chr2 116828215 116828358 -136428225 + AluSx SINE Alu 1 141 -171 1205 123 0 6 chr2 116828444 116828615 -136427968 + AluSx SINE Alu 141 310 0 246 190 63 146 chr2 116828643 116828801 -136427782 + L1M4 LINE L1 4673 4817 -1329 848 291 31 25 chr2 116828947 116829266 -136427317 + MER115 DNA AcHobo 52 372 -321 922 243 64 62 chr2 116829323 116829531 -136427052 + L1M4 LINE L1 4843 5049 -1097 871 199 7 0 chr2 116829531 116829682 -136426901 + FRAM SINE Alu 4 155 -11 922 243 64 62 chr2 116829682 116829869 -136426714 + L1M4 LINE L1 5049 5242 -904 384 22 0 0 chr2 116829869 116829914 -136426669 + (TG)n Simple_repeat Simple_repeat 2 46 0 922 243 64 62 chr2 116829914 116830031 -136426552 + L1M4 LINE L1 5242 5357 -789 1887 274 29 39 chr2 116830171 116830763 -136425820 - MER115 DNA AcHobo -57 636 51 184 355 0 24 chr2 116830902 116831026 -136425557 + L2 LINE L2 2589 2709 -605 2310 107 0 0 chr2 116831110 116831409 -136425174 - AluSx SINE Alu -13 299 1 2195 119 0 0 chr2 116831702 116831996 -136424587 - AluSx SINE Alu -18 294 1 376 286 143 0 chr2 116832723 116832891 -136423692 + MIR SINE MIR 58 249 -13 474 108 0 0 chr2 116833065 116833139 -136423444 + (CA)n Simple_repeat Simple_repeat 2 75 0 1834 139 44 24 chr2 116833143 116833437 -136423146 - AluJb SINE Alu -12 300 1 290 210 240 10 chr2 116834135 116834235 -136422348 - L2 LINE L2 -2 3311 3189 2251 114 0 0 chr2 116834252 116834551 -136422032 - AluSx SINE Alu -13 299 1 2299 40 48 0 chr2 116835135 116835408 -136421175 - AluY SINE Alu -25 286 1 11360 155 22 26 chr2 116835453 116838453 -136418130 - L1MA4 LINE L1 -95 6205 3226 300 53 0 0 chr2 116838463 116838501 -136418082 + (TG)n Simple_repeat Simple_repeat 2 39 0 1599 187 22 0 chr2 116838501 116838779 -136417804 - AluJb SINE Alu -28 284 1 613 209 32 128 chr2 116838961 116839214 -136417369 + MLT1F LTR MaLR 1 238 -329 531 264 149 19 chr2 116839236 116839444 -136417139 - MIR SINE MIR -15 247 13 480 171 23 52 chr2 116839820 116839988 -136416595 + L1MD1 LINE L1 6086 7990 -5 313 257 55 112 chr2 116840035 116840196 -136416387 + LTR33A LTR ERVL 1 129 -394 2207 93 13 7 chr2 116840389 116840689 -136415894 - AluSp SINE Alu -11 302 1 3654 201 47 19 chr2 116840710 116841964 -136414619 - L1ME1 LINE L1 -9 6655 5361 408 185 0 0 chr2 116841969 116842034 -136414549 - FRAM/FAM SINE Alu -110 65 1 1533 248 101 20 chr2 116842040 116842592 -136413991 - L1ME1 LINE L1 -4731 1915 1319 1204 198 0 13 chr2 116842598 116842835 -136413748 - AluJo SINE Alu -6 306 73 246 262 0 16 chr2 116842840 116842901 -136413682 - L1ME1 LINE L1 -5667 875 816 1919 130 4 0 chr2 116842970 116843247 -136413336 + AluSx SINE Alu 18 295 -17 311 192 26 39 chr2 116843871 116843949 -136412634 + LTR33A LTR ERVL 434 510 -13 257 322 16 33 chr2 116844088 116844209 -136412374 + MIR SINE MIR 27 145 -117 491 155 49 120 chr2 116844211 116844288 -136412295 + L1MA8 LINE L1 6160 6224 -67 2268 116 3 0 chr2 116844288 116844598 -136411985 + AluSp SINE Alu 1 311 -2 491 155 49 120 chr2 116844598 116844662 -136411921 + L1MA8 LINE L1 6224 6291 0 419 280 33 27 chr2 116845903 116846053 -136410530 - MLT1K LTR MaLR -116 472 322 1333 245 60 18 chr2 116846147 116846584 -136409999 - LTR16A1 LTR ERVL -1 456 2 4446 336 57 26 chr2 116846588 116847658 -136408925 - ERVL LTR ERVL -808 4956 3920 2696 93 25 0 chr2 116847658 116848024 -136408559 + THE1C LTR MaLR 1 375 0 4446 336 57 26 chr2 116848024 116849157 -136407426 - ERVL LTR ERVL -1844 3920 2823 2223 61 0 4 chr2 116849157 116849419 -136407164 + AluY SINE Alu 1 261 -50 186 43 0 0 chr2 116849419 116849442 -136407141 + (CAAA)n Simple_repeat Simple_repeat 4 26 0 4446 336 57 26 chr2 116849442 116849735 -136406848 - ERVL LTR ERVL -2941 2823 2372 2436 76 0 3 chr2 116849735 116850039 -136406544 - AluY SINE Alu -8 303 1 4446 336 57 26 chr2 116850039 116850150 -136406433 - ERVL LTR ERVL -3392 2372 2266 277 296 124 35 chr2 116850855 116851024 -136405559 + MLT1K LTR MaLR 10 193 -395 375 242 30 10 chr2 116851039 116851138 -136405445 + LTR16A1 LTR ERVL 21 121 -336 546 152 0 0 chr2 116851150 116851229 -136405354 + AluJ/FLAM SINE Alu 15 93 -219 1677 224 105 22 chr2 116851435 116851894 -136404689 + MLT2B3 LTR ERVL 8 504 -50 204 67 0 0 chr2 116851896 116851926 -136404657 + (TAGA)n Simple_repeat Simple_repeat 1 30 0 297 142 0 86 chr2 116851937 116852134 -136404449 + (TA)n Simple_repeat Simple_repeat 1 180 0 460 259 44 19 chr2 116852289 116852447 -136404136 + HERV16 LTR ERVL 982 1143 -3853 350 301 140 42 chr2 116852926 116853282 -136403301 - MLT1J LTR MaLR -50 461 71 2108 207 88 19 chr2 116853315 116853802 -136402781 + MLT1F LTR MaLR 3 523 -19 1871 258 68 32 chr2 116853803 116854221 -136402362 - MLT1E LTR MaLR -11 582 137 4206 135 13 3 chr2 116854221 116854850 -136401733 + MER41B LTR ERV1 1 635 0 1871 258 68 32 chr2 116854850 116854993 -136401590 - MLT1E LTR MaLR -456 137 1 809 258 53 98 chr2 116854993 116855247 -136401336 - MLT1E-int LTR MaLR 0 1371 1142 2217 136 8 35 chr2 116855247 116855621 -136400962 - THE1B LTR MaLR 0 364 1 809 258 53 98 chr2 116855621 116855796 -136400787 - MLT1E-int LTR MaLR -229 1142 961 2188 107 0 3 chr2 116855821 116856112 -136400471 - AluSx SINE Alu -20 292 3 269 143 114 14 chr2 116856299 116856369 -136400214 - MLT1E-int LTR MaLR -603 768 692 2497 82 0 0 chr2 116856967 116857271 -136399312 - AluY SINE Alu -7 304 1 2472 80 0 16 chr2 116857337 116857651 -136398932 - AluSx SINE Alu -3 309 1 1893 167 21 12 chr2 116857931 116858407 -136398176 - L1MC3 LINE L1 0 7785 7162 2118 127 60 0 chr2 116858411 116858742 -136397841 + MER41C LTR ERV1 1 351 -203 600 168 0 32 chr2 116858752 116858937 -136397646 + (TA)n Simple_repeat Simple_repeat 1 179 0 188 182 0 18 chr2 116858948 116859003 -136397580 + (TA)n Simple_repeat Simple_repeat 2 55 0 360 0 0 0 chr2 116859004 116859044 -136397539 + (TG)n Simple_repeat Simple_repeat 2 41 0 1229 138 5 10 chr2 116859046 116859241 -136397342 + MER41C LTR ERV1 349 542 -12 227 246 16 33 chr2 116859249 116859310 -136397273 - MLT1F1 LTR MaLR -475 92 33 1344 174 87 25 chr2 116859310 116859631 -136396952 - L1MC3 LINE L1 -690 7095 6755 1075 245 68 26 chr2 116859633 116860460 -136396123 - L1MDb LINE L1 -2298 4108 1055 * 9463 169 20 22 chr2 116860455 116860813 -136395770 - L1PB4 LINE L1 -71 6085 5728 1989 123 10 36 chr2 116860813 116861121 -136395462 - AluSx SINE Alu -12 300 1 9463 169 20 22 chr2 116861121 116862432 -136394151 - L1PB4 LINE L1 -428 5728 4413 189 0 0 0 chr2 116862432 116862453 -136394130 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 9463 169 20 22 chr2 116862453 116863521 -136393062 - L1PB4 LINE L1 -1743 4413 3344 840 176 18 29 chr2 116863791 116863961 -136392622 - AluJb SINE Alu -11 301 134 2711 42 0 6 chr2 116864998 116865311 -136391272 + AluY SINE Alu 1 311 0 313 237 66 0 chr2 116865386 116865462 -136391121 - L2 LINE L2 -24 3289 3209 261 206 265 22 chr2 116865846 116865916 -136390667 + Charlie1 DNA MER1_type 476 528 -2233 1850 164 3 20 chr2 116865916 116866214 -136390369 + AluJo SINE Alu 1 293 -19 261 206 265 22 chr2 116866214 116866279 -136390304 + Charlie1 DNA MER1_type 528 644 -2117 1245 174 140 0 chr2 116866289 116866524 -136390059 + MER82 DNA MER2_type 1 268 -385 1819 198 151 40 chr2 116866526 116866997 -136389586 + MER82 DNA MER2_type 131 653 0 749 161 75 70 chr2 116867023 116867209 -136389374 + Charlie1 DNA MER1_type 691 877 -1884 * 962 140 155 5 chr2 116867208 116867415 -136389168 + Charlie1 DNA MER1_type 2365 2602 -159 2215 103 7 3 chr2 116867420 116867712 -136388871 - AluSx SINE Alu -19 293 1 1790 154 10 20 chr2 116867760 116868058 -136388525 - AluJo SINE Alu -17 295 1 438 264 47 0 chr2 116870150 116870298 -136386285 - L1MA10 LINE L1 -5 6329 6175 599 126 11 0 chr2 116870397 116870492 -136386091 - AluJ/FLAM SINE Alu -213 99 4 909 144 115 5 chr2 116870507 116870715 -136385868 - L1M4 LINE L1 -858 5288 5058 365 173 80 0 chr2 116870724 116870799 -136385784 - L1MA2 LINE L1 -8 6296 6216 4015 210 32 14 chr2 116870901 116871580 -136385003 - L1M4 LINE L1 -2542 3604 2939 1962 138 7 7 chr2 116871580 116871877 -136384706 + AluSp SINE Alu 1 297 -16 4015 210 32 14 chr2 116871877 116872052 -136384531 - L1M4 LINE L1 -3207 2939 2769 2451 92 0 0 chr2 116872052 116872357 -136384226 + AluSq SINE Alu 1 305 -8 4015 210 32 14 chr2 116872357 116872499 -136384084 - L1M4 LINE L1 -3377 2769 2589 297 224 0 26 chr2 116873791 116873867 -136382716 + L1M4 LINE L1 4768 4841 -1305 * 1550 198 239 52 chr2 116873861 116873928 -136382655 + L1MC4a LINE L1 6136 6189 -1619 2300 92 7 3 chr2 116873928 116874234 -136382349 + AluSx SINE Alu 1 307 -5 1550 198 239 52 chr2 116874234 116874813 -136381770 + L1MC4a LINE L1 6189 6858 -950 1359 154 75 4 chr2 116874813 116875079 -136381504 + MLT1D LTR MaLR 1 285 -220 1650 186 113 5 chr2 116876961 116877386 -136379197 - MER31A LTR ERV1 -14 471 1 800 202 21 67 chr2 116879405 116879687 -136376896 - L1M4 LINE L1 -1663 4483 4215 29 47 0 0 chr2 116880057 116880100 -136376483 + GC_rich Low_complexity Low_complexity 1 43 0 2333 70 17 10 chr2 116881466 116881764 -136374819 + AluSx SINE Alu 1 300 -12 1774 139 16 26 chr2 116882126 116882435 -136374148 - AluJb SINE Alu -6 306 1 1582 164 25 3 chr2 116882439 116882725 -136373858 - AluJb SINE Alu -20 292 1 1595 129 114 0 chr2 116883349 116883604 -136372979 + AluSg SINE Alu 20 303 -7 334 56 0 37 chr2 116883869 116883923 -136372660 - AluSc SINE Alu -6 293 242 626 185 7 0 chr2 116883942 116884077 -136372506 - L1M4 LINE L1 -1673 4473 4338 4374 162 13 4 chr2 116884077 116884773 -136371810 + MER44D DNA MER2_type 1 574 -31 2125 128 10 0 chr2 116884845 116885143 -136371440 - AluSx SINE Alu -11 301 1 1278 217 13 37 chr2 116885546 116885846 -136370737 - AluJo SINE Alu -19 293 1 297 0 0 0 chr2 116885851 116885884 -136370699 + (ATG)n Simple_repeat Simple_repeat 1 33 0 2005 92 17 58 chr2 116885889 116886183 -136370400 - AluSx SINE Alu -30 282 1 1379 192 7 30 chr2 116886901 116887203 -136369380 - AluJo SINE Alu -17 295 1 2486 80 0 3 chr2 116889117 116889429 -136367154 - AluY SINE Alu 0 311 1 424 195 39 0 chr2 116889483 116889560 -136367023 - AluJo/FRAM SINE Alu -35 277 198 275 182 0 0 chr2 116889561 116889605 -136366978 - Alu SINE Alu -258 44 1 1731 149 7 31 chr2 116889631 116889920 -136366663 - AluJo SINE Alu -30 282 1 331 298 42 48 chr2 116890341 116890463 -136366120 + L3 LINE CR1 374 496 -1081 2245 106 3 10 chr2 116890463 116890766 -136365817 + AluSx SINE Alu 1 301 -11 331 298 42 48 chr2 116890766 116890811 -136365772 + L3 LINE CR1 496 540 -1037 432 273 72 58 chr2 116891161 116891506 -136365077 - L1MC4a LINE L1 -1774 6034 5685 452 203 49 55 chr2 116891802 116891910 -136364673 - L1MD3 LINE L1 -2 7993 7885 1491 123 40 4 chr2 116891910 116892138 -136364445 + MER46A DNA MER2_type 1 236 0 452 203 49 55 chr2 116892138 116892192 -136364391 - L1MD3 LINE L1 -110 7885 7832 * 1347 166 106 54 chr2 116892191 116892424 -136364159 - L1MD2 LINE L1 -214 6145 5885 1920 122 69 0 chr2 116892424 116892712 -136363871 - AluSx SINE Alu -4 308 1 1347 166 106 54 chr2 116892712 116892846 -136363737 - L1MD2 LINE L1 -474 5885 5759 1027 171 0 11 chr2 116892846 116893022 -136363561 - AluSg/x SINE Alu -2 308 135 427 171 57 0 chr2 116893023 116893111 -136363472 - L1MD2 LINE L1 -589 5770 5678 291 275 104 28 chr2 116893829 116894040 -136362543 - L2 LINE L2 -1892 1422 1196 248 203 0 16 chr2 116894386 116894450 -136362133 - L2 LINE L2 -2525 789 727 621 188 0 26 chr2 116894454 116894571 -136362012 + AluJo SINE Alu 86 199 -113 279 268 92 26 chr2 116894738 116894891 -136361692 - L2 LINE L2 -3065 249 87 21 0 0 0 chr2 116896153 116896174 -136360409 + AT_rich Low_complexity Low_complexity 1 21 0 708 257 79 0 chr2 116896421 116896623 -136359960 + MER58A DNA MER1_type 1 218 -6 266 186 143 0 chr2 116896844 116896914 -136359669 - Charlie1 DNA MER1_type -8 2753 2674 1750 84 58 0 chr2 116896925 116897150 -136359433 - AluSc SINE Alu 0 309 72 1074 142 11 11 chr2 116897150 116897323 -136359260 - AluSc SINE Alu -15 294 119 602 103 0 0 chr2 116897323 116897401 -136359182 - AluY SINE Alu -22 289 212 1747 65 0 9 chr2 116897728 116897942 -136358641 - AluY SINE Alu -99 212 1 815 102 0 87 chr2 116897942 116898012 -136358571 - AluSc SINE Alu -165 144 88 2490 65 0 0 chr2 116898012 116898305 -136358278 - AluY SINE Alu -18 293 1 815 102 0 87 chr2 116898305 116898361 -136358222 - AluSc SINE Alu -221 88 29 592 121 0 0 chr2 116898361 116898444 -136358139 - AluSc SINE Alu -225 84 2 521 136 124 68 chr2 116898446 116898549 -136358034 - Charlie1 DNA MER1_type -78 2683 2564 2409 90 0 3 chr2 116898549 116898850 -136357733 - AluSq SINE Alu -13 300 1 521 136 124 68 chr2 116898850 116898923 -136357660 - Charlie1 DNA MER1_type -197 2564 2497 2146 123 0 13 chr2 116899179 116899480 -136357103 + AluSg SINE Alu 1 297 -13 2282 107 0 3 chr2 116900682 116900991 -136355592 - AluSc SINE Alu 0 309 2 2525 70 0 13 chr2 116901001 116901316 -136355267 - AluY SINE Alu 0 311 1 198 0 0 0 chr2 116901316 116901338 -136355245 + (T)n Simple_repeat Simple_repeat 1 22 0 1217 68 7 0 chr2 116903511 116903657 -136352926 + AluSp SINE Alu 1 147 -166 260 315 126 0 chr2 116904271 116904382 -136352201 - L2 LINE L2 0 3272 3148 870 233 46 14 chr2 116904677 116904896 -136351687 + L1ME1 LINE L1 5918 6143 -23 429 204 194 0 chr2 116904896 116904999 -136351584 - L2 LINE L2 -22 3291 3169 336 340 15 30 chr2 116905061 116905123 -136351460 - L2 LINE L2 -358 2956 2895 2253 126 7 0 chr2 116905123 116905433 -136351150 + AluSx SINE Alu 1 312 0 336 340 15 30 chr2 116905433 116905567 -136351016 - L2 LINE L2 -419 2895 2763 623 287 89 24 chr2 116905575 116905822 -136350761 - L2 LINE L2 -861 2453 2191 258 336 153 0 chr2 116906842 116906973 -136349610 - MIR SINE MIR -21 241 91 21 0 0 0 chr2 116907203 116907224 -136349359 + AT_rich Low_complexity Low_complexity 1 21 0 584 294 86 61 chr2 116907668 116908251 -136348332 - L1M4 LINE L1 -2445 3701 2936 589 278 160 3 chr2 116908301 116908589 -136347994 - LTR16C LTR ERVL 0 491 159 286 261 130 31 chr2 116908717 116908878 -136347705 - LTR50 LTR ERVL -138 657 481 800 177 266 0 chr2 116908989 116909226 -136347357 - LTR50 LTR ERVL -495 300 1 435 295 50 38 chr2 116909231 116909902 -136346681 - L1M4 LINE L1 -3201 2945 2110 1760 165 9 32 chr2 116910060 116910375 -136346208 - AluJo SINE Alu -4 308 1 399 306 128 43 chr2 116910449 116911216 -136345367 - HAL1 LINE L1 -838 1669 838 1103 171 0 0 chr2 116911695 116911859 -136344724 + AluJb SINE Alu 136 299 -13 2298 97 0 7 chr2 116911862 116912161 -136344422 + AluY SINE Alu 1 297 -14 25 65 0 0 chr2 116912739 116912785 -136343798 + AT_rich Low_complexity Low_complexity 1 46 0 1632 222 64 84 chr2 116912887 116913270 -136343313 - HAL1 LINE L1 -10 2497 2137 2390 68 7 7 chr2 116913270 116913566 -136343017 + AluY SINE Alu 1 296 -15 1632 222 64 84 chr2 116913566 116913975 -136342608 - HAL1 LINE L1 -370 2137 1721 * 1802 246 167 27 chr2 116913968 116914778 -136341805 - HAL1 LINE L1 -1555 952 30 2068 130 14 0 chr2 116915213 116915497 -136341086 + AluSx SINE Alu 1 288 -24 2354 77 7 0 chr2 116915509 116915795 -136340788 + AluY SINE Alu 1 288 -23 1856 119 0 93 chr2 116916870 116917182 -136339401 + AluSq SINE Alu 10 292 -21 21 36 0 0 chr2 116918517 116918545 -136338038 + AT_rich Low_complexity Low_complexity 1 28 0 643 276 100 14 chr2 116918750 116918960 -136337623 + MIR SINE MIR 23 250 -12 218 333 44 0 chr2 116919344 116919434 -136337149 + L3b LINE CR1 1290 1383 -200 363 216 0 68 chr2 116920260 116920348 -136336235 + MIR SINE MIR 109 190 -72 423 254 16 25 chr2 116921803 116921925 -136334658 + MIR SINE MIR 17 137 -71 327 49 0 0 chr2 116924225 116924266 -136332317 + (TG)n Simple_repeat Simple_repeat 2 42 0 212 333 0 0 chr2 116925970 116926048 -136330535 + (TG)n Simple_repeat Simple_repeat 1 78 0 1477 136 34 89 chr2 116927257 116927753 -136328830 + AluSg SINE Alu 1 310 0 294 95 0 0 chr2 116927753 116927795 -136328788 + (GGGA)n Simple_repeat Simple_repeat 2 43 0 245 71 71 0 chr2 116927795 116927837 -136328746 + GA-rich Low_complexity Low_complexity 2 46 0 2222 123 0 0 chr2 116927837 116928139 -136328444 + AluSg SINE Alu 1 302 -8 676 219 65 0 chr2 116928301 116928456 -136328127 + Tigger3(Golem) DNA MER2_type 1 165 -2864 906 169 7 0 chr2 116928456 116928610 -136327973 + Tigger3(Golem) DNA MER2_type 2874 3028 -1 266 215 13 0 chr2 116928664 116928743 -136327840 + (TGGA)n Simple_repeat Simple_repeat 2 81 0 562 300 33 11 chr2 116929530 116929710 -136326873 - MIR SINE MIR -77 185 2 878 302 17 14 chr2 116929748 116930099 -136326484 + L1MC4 LINE L1 7567 7918 -124 334 37 74 0 chr2 116930114 116930168 -136326415 + (CATA)n Simple_repeat Simple_repeat 4 61 0 258 270 7 101 chr2 116930170 116930318 -136326265 + L1MC4 LINE L1 7904 8037 -5 7294 17 1 0 chr2 116930347 116931235 -136325348 + L1PA4 LINE L1 5228 6116 -39 671 150 1 1 chr2 116931335 116932542 -136324041 - CER Satellite Satellite 0 1207 1 1026 105 5 0 chr2 116932645 116933474 -136323109 - ACRO1 Satellite acromeric 0 832 1 556 214 0 0 chr2 116933806 116934062 -136322521 - ACRO1 Satellite acromeric 0 256 1 284 218 0 0 chr2 116934923 116934978 -136321605 - Tigger5 DNA MER2_type -2268 55 1 1783 118 66 0 chr2 116935367 116935654 -136320929 + L1PA10 LINE L1 5863 6168 0 851 263 42 29 chr2 116935827 116936139 -136320444 - MER21A LTR ERV1 -132 799 484 841 175 84 0 chr2 116936122 116936288 -136320295 - MER21B LTR ERV1 -485 378 199 * 203 250 132 13 chr2 116936540 116936616 -136319967 - MER5A DNA MER1_type -6 183 99 216 0 0 0 chr2 116937033 116937057 -136319526 + (TCTG)n Simple_repeat Simple_repeat 1 24 0 321 140 0 0 chr2 116937113 116937170 -136319413 + (CA)n Simple_repeat Simple_repeat 2 58 0 553 210 0 0 chr2 116937656 116937912 -136318671 - ACRO1 Satellite acromeric 0 256 1 452 86 14 0 chr2 116938333 116938403 -136318180 + (TG)n Simple_repeat Simple_repeat 1 71 0 342 0 0 0 chr2 116938446 116938484 -136318099 + (CAGA)n Simple_repeat Simple_repeat 3 40 0 210 237 132 13 chr2 116938901 116938977 -136317606 + MER5A DNA MER1_type 99 183 -6 841 175 84 0 chr2 116939229 116939395 -136317188 + MER21B LTR ERV1 199 378 -485 857 244 68 11 chr2 116939424 116939690 -136316893 + MER21B LTR ERV1 450 730 -133 606 149 61 9 chr2 116939839 116939853 -136316730 - L1PA7 LINE L1 -6 6148 6136 186 103 0 0 chr2 116939853 116939882 -136316701 + (TTTCG)n Simple_repeat Simple_repeat 2 30 0 606 149 61 9 chr2 116939882 116939981 -136316602 - L1PA7 LINE L1 -18 6136 6029 1852 179 0 22 chr2 116940091 116940454 -136316129 - AluJo SINE Alu 0 356 1 414 314 0 8 chr2 116940465 116940589 -136315994 - L1ME LINE L1 -514 5607 5485 486 310 124 48 chr2 116940995 116941285 -136315298 - L3 LINE CR1 -46 1531 1220 3589 131 100 29 chr2 116941607 116941757 -136314826 - MER44D DNA MER2_type -1882 705 567 2282 81 23 19 chr2 116941757 116942065 -136314518 + AluSp SINE Alu 1 309 -4 3589 131 100 29 chr2 116942065 116942153 -136314430 - MER44D DNA MER2_type -2020 567 487 1850 164 0 20 chr2 116942153 116942451 -136314132 - AluJo SINE Alu -20 292 1 3589 131 100 29 chr2 116942451 116942869 -136313714 - MER44D DNA MER2_type -2100 487 1 4895 191 51 11 chr2 116943014 116943999 -136312584 + MSTB-int LTR MaLR 390 1413 -238 1375 115 10 0 chr2 116944002 116944211 -136312372 + MER41B LTR ERV1 2 212 -423 1868 139 33 38 chr2 116944211 116944577 -136312006 + THE1C LTR MaLR 1 364 -11 2366 118 18 85 chr2 116944580 116945037 -136311546 + MER41B LTR ERV1 210 635 0 1534 130 4 11 chr2 116945037 116945299 -136311284 + MSTB-int LTR MaLR 1392 1651 0 2351 180 54 5 chr2 116945299 116945705 -136310878 + MSTB LTR MaLR 1 426 0 272 227 129 37 chr2 116945983 116946146 -136310437 - L1ME4a LINE L1 -2 6119 5942 249 247 12 25 chr2 116946278 116946359 -136310224 + MLT1J2 LTR MaLR 71 150 -300 1801 150 7 30 chr2 116946714 116947014 -136309569 - AluJo SINE Alu -19 293 1 271 309 191 38 chr2 116947391 116947835 -136308748 + L2 LINE L2 2344 2855 -459 974 187 0 0 chr2 116947947 116948124 -136308459 - FRAM SINE Alu 0 173 1 508 303 123 31 chr2 116948912 116949402 -136307181 + L2 LINE L2 2600 3170 -143 1888 190 71 0 chr2 116949402 116949739 -136306844 + MLT1A1 LTR MaLR 1 361 -4 508 303 123 31 chr2 116949739 116949898 -136306685 + L2 LINE L2 3170 3313 0 2411 93 10 6 chr2 116950288 116950599 -136305984 + AluSx SINE Alu 1 312 0 252 245 0 0 chr2 116950615 116950668 -136305915 - MIR SINE MIR -109 153 101 239 283 120 90 chr2 116950698 116950998 -136305585 + L2 LINE L2 2932 3240 -32 576 292 47 12 chr2 116951684 116951855 -136304728 - MIR3 SINE MIR -1 207 31 520 261 42 14 chr2 116952009 116952151 -136304432 + L2 LINE L2 3168 3313 0 336 259 176 78 chr2 116953058 116953097 -136303486 - MIR SINE MIR -30 232 198 1798 184 3 10 chr2 116953097 116953401 -136303182 - AluJb SINE Alu -10 302 1 336 259 176 78 chr2 116953401 116953566 -136303017 - MIR SINE MIR -64 198 8 202 299 32 39 chr2 116953793 116953947 -136302636 - L2 LINE L2 -86 3227 3075 184 339 62 0 chr2 116954582 116954647 -136301936 + MIR SINE MIR 117 185 -77 21 0 0 0 chr2 116955150 116955171 -136301412 + GC_rich Low_complexity Low_complexity 1 21 0 3297 146 26 30 chr2 116955461 116956066 -136300517 - L1MB3 LINE L1 -4 6179 5577 338 351 181 4 chr2 116956677 116956936 -136299647 - L3 LINE CR1 -36 1541 1237 1771 164 0 45 chr2 116956989 116957299 -136299284 + AluJo SINE Alu 3 298 -14 1394 164 137 4 chr2 116957355 116957611 -136298972 - AluJb SINE Alu -10 292 3 4300 147 43 8 chr2 116957853 116958090 -136298493 - L1MB8 LINE L1 -9 6169 5942 2606 169 45 9 chr2 116958090 116958535 -136298048 - LOR1b LTR ERV1 0 461 1 4300 147 43 8 chr2 116958535 116959093 -136297490 - L1MB8 LINE L1 -236 5942 5302 1405 134 5 27 chr2 116959094 116959317 -136297266 - AluSg/x SINE Alu -14 298 81 324 314 0 51 chr2 116959544 116959662 -136296921 - L3 LINE CR1 -1039 538 427 827 174 0 0 chr2 116959663 116959784 -136296799 + FLAM_C SINE Alu 2 122 -21 374 278 122 22 chr2 116960062 116960242 -136296341 - MIR SINE MIR -36 226 29 875 167 0 0 chr2 116960411 116960543 -136296040 + FLAM_C SINE Alu 1 132 -1 427 358 36 5 chr2 116960680 116960901 -136295682 - L3 LINE CR1 -1186 391 164 382 294 66 22 chr2 116961420 116961556 -136295027 + MER5B DNA MER1_type 1 142 -36 24 32 0 0 chr2 116961927 116961958 -136294625 + AT_rich Low_complexity Low_complexity 1 31 0 31 26 0 0 chr2 116962518 116962556 -136294027 + AT_rich Low_complexity Low_complexity 1 38 0 697 265 160 23 chr2 116962697 116963214 -136293369 - MLT1L LTR MaLR 0 615 1 256 272 108 69 chr2 116963224 116963584 -136292999 + L2 LINE L2 2174 2547 -767 22 35 0 0 chr2 116963620 116963649 -136292934 + AT_rich Low_complexity Low_complexity 1 29 0 1864 141 3 43 chr2 116963649 116963953 -136292630 - AluJb SINE Alu -20 292 1 50 42 0 0 chr2 116964718 116964789 -136291794 + AT_rich Low_complexity Low_complexity 1 71 0 204 275 77 71 chr2 116964858 116965025 -136291558 - MIR3 SINE MIR -6 202 25 183 337 11 22 chr2 116965010 116965099 -136291484 + MIR SINE MIR 57 144 -118 * 400 314 192 13 chr2 116965407 116965636 -136290947 + L2 LINE L2 2511 2780 -534 368 298 125 45 chr2 116966082 116966418 -136290165 + L2 LINE L2 2951 3313 0 211 235 104 61 chr2 116966643 116966758 -136289825 + MIR SINE MIR 17 136 -72 386 39 19 0 chr2 116967305 116967357 -136289226 + (TG)n Simple_repeat Simple_repeat 2 54 0 234 343 55 17 chr2 116967609 116967790 -136288793 + L1ME LINE L1 5512 5699 -422 199 270 63 16 chr2 116968265 116968328 -136288255 + MIR SINE MIR 82 147 -61 489 277 98 15 chr2 116969185 116969573 -136287010 + L1ME4a LINE L1 5572 6102 -19 335 287 26 9 chr2 116969669 116969784 -136286799 + MIR3 SINE MIR 40 156 -52 2072 71 63 0 chr2 116969877 116970181 -136286402 + AluY SINE Alu 1 321 0 340 248 19 57 chr2 116970181 116970277 -136286306 - MIR SINE MIR -6 256 162 307 98 0 0 chr2 116970277 116970318 -136286265 + tRNA-Lys-AAG tRNA tRNA 1 41 -35 447 255 0 0 chr2 116970318 116970424 -136286159 - MIR SINE MIR -82 180 75 241 222 19 19 chr2 116971276 116971330 -136285253 + MARNA DNA Mariner 140 193 -393 729 209 0 8 chr2 116974770 116974899 -136281684 + FLAM_A SINE Alu 2 129 -4 389 265 147 29 chr2 116976231 116976435 -136280148 - MIR SINE MIR -22 240 13 523 309 30 6 chr2 116977050 116977218 -136279365 - MIR SINE MIR -44 218 47 377 314 54 49 chr2 116977341 116977526 -136279057 - MIR3 SINE MIR -18 190 5 2230 99 10 3 chr2 116977599 116977893 -136278690 + AluSq SINE Alu 1 296 -17 265 278 67 61 chr2 116978179 116978359 -136278224 - L2 LINE L2 -443 2871 2691 2699 147 49 2 chr2 116978731 116979138 -136277445 + MSTB LTR MaLR 1 426 0 2462 78 7 0 chr2 116979138 116979447 -136277136 + AluY SINE Alu 1 311 0 2366 152 2 18 chr2 116979459 116979853 -136276730 + MSTB-int LTR MaLR 1 388 -1263 1010 219 63 19 chr2 117079872 117080142 -136176441 - L1ME1 LINE L1 -144 6022 5741 890 284 85 15 chr2 117080144 117080602 -136175981 - L1MEc LINE L1 -4582 1814 1325 675 256 6 12 chr2 117080610 117080774 -136175809 - MER41E LTR ERV1 -3 509 347 3260 83 9 5 chr2 117080783 117081228 -136175355 - L1PA10 LINE L1 -10 6158 5712 3150 99 11 7 chr2 117081228 117081681 -136174902 + L1PA10 LINE L1 5268 5722 -446 290 308 9 28 chr2 117081704 117081811 -136174772 - MER41E LTR ERV1 -171 341 237 1993 192 71 85 chr2 117082127 117082454 -136174129 - L1MEc LINE L1 -5223 1173 843 2174 120 0 3 chr2 117082454 117082745 -136173838 - AluSq SINE Alu -23 290 1 1993 192 71 85 chr2 117082745 117083111 -136173472 - L1MEc LINE L1 -5553 843 490 * 2604 255 52 52 chr2 117083091 117084062 -136172521 - L1MEc LINE L1 -5390 1006 36 206 97 0 0 chr2 117084107 117084138 -136172445 + MIR SINE MIR 6 36 -226 248 350 14 21 chr2 117084177 117084317 -136172266 + MIR SINE MIR 124 262 0 208 338 88 29 chr2 117084688 117084824 -136171759 + MER5B DNA MER1_type 3 146 -32 908 177 38 21 chr2 117085018 117085204 -136171379 - MER5A DNA MER1_type 0 189 1 3505 289 107 23 chr2 117085984 117087768 -136168815 + L2 LINE L2 50 1983 -1331 255 304 94 27 chr2 117087874 117088011 -136168572 + L2 LINE L2 1968 2127 -1187 973 182 96 5 chr2 117088011 117088209 -136168374 + MER20 DNA MER1_type 4 219 0 255 304 94 27 chr2 117088209 117088295 -136168288 + L2 LINE L2 2127 2206 -1108 658 228 18 12 chr2 117088526 117088693 -136167890 - MER83C LTR ERV1 0 373 206 933 269 45 48 chr2 117089031 117089429 -136167154 + L2 LINE L2 2907 3303 -10 185 247 0 123 chr2 117090050 117090131 -136166452 - MIR SINE MIR -136 126 56 194 143 20 0 chr2 117090937 117090986 -136165597 + (CTG)n Simple_repeat Simple_repeat 2 51 0 192 40 0 0 chr2 117091450 117091475 -136165108 + (TG)n Simple_repeat Simple_repeat 2 26 0 381 286 56 24 chr2 117091514 117091748 -136164835 + MLT1H LTR MaLR 40 282 -127 276 372 70 0 chr2 117092061 117092217 -136164366 - MIR3 SINE MIR -6 202 36 333 175 168 10 chr2 117092441 117092578 -136164005 - MER5A DNA MER1_type 0 189 1 2244 95 3 44 chr2 117093401 117093717 -136162866 + AluSx SINE Alu 1 303 -9 1099 304 81 42 chr2 117093846 117094777 -136161806 + L1M4 LINE L1 3543 4509 -1637 3278 205 62 20 chr2 117095199 117096056 -136160527 - L1MC4a LINE L1 -2 7806 6914 2671 30 0 0 chr2 117096745 117097042 -136159541 + AluY SINE Alu 5 301 -10 23 0 0 0 chr2 117097286 117097309 -136159274 + AT_rich Low_complexity Low_complexity 1 23 0 432 287 8 0 chr2 117098583 117098712 -136157871 - MER5B DNA MER1_type -40 138 9 1555 333 67 32 chr2 117098822 117099302 -136157281 + ERVL LTR ERVL 1377 1839 -3925 1699 162 85 14 chr2 117099302 117099666 -136156917 + MLT1B LTR MaLR 1 390 0 1555 333 67 32 chr2 117099666 117100239 -136156344 + ERVL LTR ERVL 1839 2467 -3297 1260 213 11 15 chr2 117100262 117100525 -136156058 - L1PB4 LINE L1 -3 6153 5892 843 271 21 64 chr2 117100533 117100910 -136155673 + ERVL LTR ERVL 5017 5336 -318 610 213 63 75 chr2 117101124 117101298 -136155285 + LTR33 LTR ERVL 1 172 -349 588 95 191 19 chr2 117101751 117101856 -136154727 + Tigger3(Golem) DNA MER2_type 2841 2963 -66 767 297 74 16 chr2 117101886 117102196 -136154387 + LTR33 LTR ERVL 194 521 0 535 296 55 19 chr2 117102567 117103071 -136153512 - L1ME LINE L1 -546 5624 5098 335 290 46 0 chr2 117105019 117105150 -136151433 + LTR33A LTR ERVL 364 500 -23 521 302 45 21 chr2 117107961 117108203 -136148380 + L3 LINE CR1 1220 1467 -110 234 0 0 0 chr2 117108285 117108311 -136148272 + (TGAA)n Simple_repeat Simple_repeat 4 29 0 231 167 0 0 chr2 117110357 117110399 -136146184 + (CAATT)n Simple_repeat Simple_repeat 4 45 0 799 270 114 54 chr2 117110430 117111090 -136145493 - L2 LINE L2 -46 3267 2509 1357 246 174 8 chr2 117111180 117111709 -136144874 - L2 LINE L2 -1367 1947 1331 1008 308 80 48 chr2 117111837 117112576 -136144007 - L2 LINE L2 -167 3146 2383 2054 141 0 3 chr2 117113423 117113720 -136142863 - AluSx SINE Alu -16 296 1 586 332 28 5 chr2 117113871 117114085 -136142498 + MIR SINE MIR 34 252 -10 1636 230 86 6 chr2 117115105 117115571 -136141012 - MLT1F LTR MaLR 0 542 52 2762 124 0 0 chr2 117115571 117115935 -136140648 - THE1B LTR MaLR 0 364 1 10763 102 8 27 chr2 117115935 117117490 -136139093 - THE1B-int LTR MaLR 0 1580 56 1818 206 102 2 chr2 117117541 117117963 -136138620 - MLT1F LTR MaLR 0 542 49 2801 117 0 8 chr2 117117963 117118330 -136138253 - THE1B LTR MaLR 0 364 1 1818 206 102 2 chr2 117118330 117118385 -136138198 - MLT1F LTR MaLR -493 49 1 958 256 36 56 chr2 117118421 117118870 -136137713 - LTR37B LTR ERV1 0 468 29 1351 151 5 18 chr2 117118874 117119093 -136137490 - AluSg/x SINE Alu -16 296 81 562 65 0 0 chr2 117119332 117119409 -136137174 + L1PA3 LINE L1 6079 6155 0 555 289 103 31 chr2 117119668 117120087 -136136496 + L1ME4a LINE L1 5649 6097 -24 543 211 0 27 chr2 117120185 117120370 -136136213 + GA-rich Low_complexity Low_complexity 1 180 0 351 312 14 7 chr2 117121526 117121664 -136134919 - MER103 DNA DNA 0 166 28 321 293 43 12 chr2 117121901 117122065 -136134518 - MIR3 SINE MIR -28 180 12 256 241 0 0 chr2 117123011 117123065 -136133518 + MER4-int LTR ERV1 1111 1164 -5434 311 216 0 10 chr2 117123075 117123172 -136133411 + (TATG)n Simple_repeat Simple_repeat 4 99 0 512 230 123 28 chr2 117124819 117125071 -136131512 + L1ME4a LINE L1 5846 6121 0 1864 211 61 16 chr2 117125362 117125802 -136130781 + MLT1C LTR MaLR 8 467 0 841 165 46 107 chr2 117125810 117126093 -136130490 + MLT1F1 LTR MaLR 30 304 -263 505 128 0 23 chr2 117126111 117126197 -136130386 + MLT1F1 LTR MaLR 482 565 -2 371 307 130 59 chr2 117126670 117127009 -136129574 + L2 LINE L2 2893 3255 -17 186 385 82 0 chr2 117127013 117127148 -136129435 + L2 LINE L2 2937 3082 -190 772 319 51 22 chr2 117127477 117127764 -136128819 + L3 LINE CR1 1244 1542 -35 1972 132 7 0 chr2 117127764 117128045 -136128538 - AluSx SINE Alu -29 283 1 772 319 51 22 chr2 117128045 117128071 -136128512 + L3 LINE CR1 1542 1566 -11 934 126 6 22 chr2 117128562 117128744 -136127839 + (TGGA)n Simple_repeat Simple_repeat 2 180 0 241 307 40 0 chr2 117130047 117130122 -136126461 - MIR SINE MIR -115 93 16 248 309 11 103 chr2 117130334 117130509 -136126074 - MIR3 SINE MIR 0 208 50 434 152 189 45 chr2 117132148 117132280 -136124303 + MER5A DNA MER1_type 9 159 -30 236 297 79 20 chr2 117132356 117132457 -136124126 + MER5B DNA MER1_type 72 178 0 2679 137 43 17 chr2 117134041 117134458 -136122125 + MSTA LTR MaLR 1 428 0 29 28 0 0 chr2 117134719 117134755 -136121828 + AT_rich Low_complexity Low_complexity 1 36 0 9275 212 51 59 chr2 117134771 117136902 -136119681 - L1MA8 LINE L1 -2 7708 5561 3293 71 57 0 chr2 117136902 117137325 -136119258 + L1PA8 LINE L1 5721 6167 -5 9275 212 51 59 chr2 117137325 117141114 -136115469 - L1MA8 LINE L1 -2149 5561 1885 1592 252 50 30 chr2 117141119 117141704 -136114879 - L1MA8 LINE L1 -6627 862 10 21 0 0 0 chr2 117141878 117141899 -136114684 + AT_rich Low_complexity Low_complexity 1 21 0 189 256 0 0 chr2 117142990 117143029 -136113554 - MER5A DNA MER1_type -2 187 149 218 389 9 9 chr2 117143085 117143193 -136113390 - MER5B DNA MER1_type -69 109 2 481 192 91 19 chr2 117143354 117143516 -136113067 + L1ME LINE L1 5660 5823 -342 1451 174 61 44 chr2 117144423 117144596 -136111987 - AluJo SINE Alu -13 299 117 189 0 0 0 chr2 117144596 117144617 -136111966 + (TTTTA)n Simple_repeat Simple_repeat 1 21 0 1451 174 61 44 chr2 117144617 117144737 -136111846 - AluJo SINE Alu -195 117 1 1821 202 67 15 chr2 117144741 117145132 -136111451 - L1PA12 LINE L1 -7170 411 1 977 257 61 20 chr2 117145134 117145296 -136111287 + HAL1 LINE L1 2039 2193 -314 306 0 0 0 chr2 117145296 117145330 -136111253 + (TG)n Simple_repeat Simple_repeat 2 35 0 977 257 61 20 chr2 117145330 117145513 -136111070 + HAL1 LINE L1 2193 2398 -109 21 0 0 0 chr2 117146116 117146137 -136110446 + AT_rich Low_complexity Low_complexity 1 21 0 287 152 174 22 chr2 117146620 117146712 -136109871 - L1ME3 LINE L1 -214 5956 5851 987 228 67 111 chr2 117146749 117146873 -136109710 - LTR16B LTR ERVL -45 419 291 2120 116 7 16 chr2 117146873 117147176 -136109407 + AluSx SINE Alu 1 300 -12 987 228 67 111 chr2 117147176 117147485 -136109098 - LTR16B LTR ERVL -173 291 5 304 248 36 104 chr2 117147654 117147917 -136108666 - MERVL LTR ERVL -203 5282 4576 668 297 47 39 chr2 117147932 117148036 -136108547 - MERVL LTR ERVL -995 4659 4557 767 259 66 5 chr2 117148036 117148233 -136108350 - MER63A DNA MER1_type 0 210 2 668 297 47 39 chr2 117148233 117148492 -136108091 - MERVL LTR ERVL -1097 4557 4293 686 287 64 48 chr2 117148498 117149291 -136107292 - L1MEc LINE L1 -4706 1829 849 392 313 20 0 chr2 117149787 117149886 -136106697 - MER5A DNA MER1_type -80 109 9 188 355 108 5 chr2 117150995 117151181 -136105402 - MIR SINE MIR -51 211 7 243 236 181 0 chr2 117151182 117151254 -136105329 - LTR16C LTR ERVL 0 491 407 300 167 0 0 chr2 117151581 117151629 -136104954 - MLT2D LTR ERVL 0 414 367 849 124 0 0 chr2 117151777 117151890 -136104693 - AluSq/x SINE Alu -193 119 7 3650 100 11 4 chr2 117151891 117152412 -136104171 - HSMAR2 DNA Mariner -777 525 1 2483 215 41 4 chr2 117152416 117152905 -136103678 - MLT2B3 LTR ERVL -46 508 2 222 325 128 35 chr2 117154298 117154501 -136102082 + L3 LINE CR1 1214 1435 -142 27 29 0 0 chr2 117154947 117154981 -136101602 + AT_rich Low_complexity Low_complexity 1 34 0 1140 175 18 23 chr2 117155278 117155495 -136101088 + MER20 DNA MER1_type 1 216 -3 1944 18 5 5 chr2 117156385 117156606 -136099977 - AluY SINE Alu -9 302 82 3633 48 0 0 chr2 117156850 117157268 -136099315 - L1PA4 LINE L1 -3 6152 5735 1328 47 0 12 chr2 117157389 117157558 -136099025 + L1P1 LINE L1 5612 5778 -377 2578 151 21 26 chr2 117158839 117159308 -136097275 - L1MB1 LINE L1 -20 6148 5682 2323 150 83 9 chr2 117159301 117159603 -136096980 + L1M3 LINE L1 4991 5269 -899 * 378 0 0 0 chr2 117159603 117159645 -136096938 + (CAAA)n Simple_repeat Simple_repeat 1 42 0 2323 150 83 9 chr2 117159645 117160013 -136096570 + L1M3 LINE L1 5269 5696 -472 335 241 38 6 chr2 117160293 117160451 -136096132 + (TA)n Simple_repeat Simple_repeat 2 164 0 1957 259 68 28 chr2 117160778 117161244 -136095339 + HsTC2a DNA Tc2 29 533 -1367 2158 134 0 3 chr2 117161244 117161551 -136095032 + AluSx SINE Alu 1 306 -6 1957 259 68 28 chr2 117161551 117161771 -136094812 + HsTC2a DNA Tc2 533 743 -1 346 269 27 63 chr2 117161783 117162006 -136094577 - L1M4 LINE L1 -3822 2324 2110 337 263 56 94 chr2 117162330 117162581 -136094002 - L1M4 LINE L1 -770 5376 5134 2365 75 7 0 chr2 117162581 117162876 -136093707 - AluY SINE Alu -14 297 1 337 263 56 94 chr2 117162876 117162890 -136093693 - L1M4 LINE L1 -1012 5134 5121 195 343 20 20 chr2 117163450 117163552 -136093031 - MIR SINE MIR -112 150 49 2916 195 69 3 chr2 117164349 117164975 -136091608 + LTR65 LTR ERV1 3 669 0 662 191 9 0 chr2 117165479 117165594 -136090989 + FLAM_C SINE Alu 2 117 -26 267 31 0 0 chr2 117165595 117165627 -136090956 + (GGAGAA)n Simple_repeat Simple_repeat 1 32 0 1009 123 12 0 chr2 117165719 117165889 -136090694 + (GAA)n Simple_repeat Simple_repeat 1 172 0 223 89 0 44 chr2 117165891 117165936 -136090647 + (GGA)n Simple_repeat Simple_repeat 1 43 0 265 279 117 18 chr2 117166476 117166587 -136089996 - L2 LINE L2 -8 3264 3143 739 309 110 43 chr2 117166783 117167454 -136089129 - L2 LINE L2 -362 2952 2237 392 136 200 14 chr2 117167469 117167609 -136088974 + THE1C LTR MaLR 12 177 -198 1817 102 8 0 chr2 117167788 117168032 -136088551 + THE1B LTR MaLR 118 363 -1 368 304 88 32 chr2 117168049 117168391 -136088192 - L2 LINE L2 -1112 2202 1842 1684 173 65 25 chr2 117168461 117168785 -136087798 - MER1B DNA MER1_type 0 337 1 23 54 0 0 chr2 117168798 117168835 -136087748 + AT_rich Low_complexity Low_complexity 1 37 0 368 269 41 97 chr2 117169125 117169381 -136087202 + L1MC4a LINE L1 5641 5879 -299 2282 110 0 10 chr2 117169381 117169681 -136086902 + AluSx SINE Alu 1 297 -15 368 269 41 97 chr2 117169681 117169756 -136086827 + L1MC4a LINE L1 5879 5957 -221 292 268 0 0 chr2 117170650 117170721 -136085862 - Charlie8 DNA MER1_type -2201 216 146 365 233 117 19 chr2 117171503 117171606 -136084977 + L2 LINE L2 3195 3307 -6 693 290 50 37 chr2 117174159 117174456 -136082127 - LTR16C LTR ERVL 0 491 191 853 251 85 40 chr2 117174874 117175235 -136081348 + Charlie7 DNA MER1_type 278 655 -1957 2536 127 71 5 chr2 117175235 117175659 -136080924 - Tigger2 DNA MER2_type 0 2718 2267 455 130 0 0 chr2 117175643 117175712 -136080871 - Tigger2 DNA MER2_type -2649 69 1 * 414 322 23 12 chr2 117177507 117177678 -136078905 + MLT1J LTR MaLR 1 173 -338 419 330 197 30 chr2 117177735 117178275 -136078308 - L2 LINE L2 -706 2608 2160 2239 110 0 3 chr2 117178275 117178567 -136078016 + AluSg SINE Alu 1 291 -19 419 330 197 30 chr2 117178567 117179037 -136077546 - L2 LINE L2 -1154 2160 1429 414 39 0 0 chr2 117180441 117180493 -136076090 + (TG)n Simple_repeat Simple_repeat 2 53 0 299 272 110 70 chr2 117181478 117181557 -136075026 - MIR SINE MIR -16 246 172 1898 128 3 40 chr2 117181557 117181861 -136074722 - AluSq SINE Alu -20 293 1 299 272 110 70 chr2 117181861 117182009 -136074574 - MIR SINE MIR -90 172 10 187 262 115 0 chr2 117182025 117182086 -136074497 + L3 LINE CR1 1025 1092 -485 520 316 115 21 chr2 117182270 117182775 -136073808 + L2 LINE L2 2587 3136 -177 189 107 0 0 chr2 117182797 117182825 -136073758 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 191 343 22 37 chr2 117182826 117182960 -136073623 + L2 LINE L2 3182 3313 0 1892 122 51 14 chr2 117184271 117184567 -136072016 - AluSx SINE Alu -5 307 1 2356 101 3 0 chr2 117185690 117185987 -136070596 + AluSp SINE Alu 1 298 -15 307 295 138 59 chr2 117188127 117188381 -136068202 + L1MEc LINE L1 161 434 -5771 1818 274 102 79 chr2 117188458 117189314 -136067269 + L1M4 LINE L1 3860 4764 -1382 1771 179 3 6 chr2 117189314 117189626 -136066957 + AluJb SINE Alu 1 311 -1 1818 274 102 79 chr2 117189626 117190191 -136066392 + L1M4 LINE L1 4764 5314 -832 943 114 0 8 chr2 117190191 117190322 -136066261 - FAM SINE Alu -20 165 36 1801 236 43 42 chr2 117190764 117192002 -136064581 - L1ME1 LINE L1 -5 6230 4952 2066 127 27 0 chr2 117192002 117192294 -136064289 - AluSx SINE Alu -12 300 1 1801 236 43 42 chr2 117192294 117192410 -136064173 - L1ME1 LINE L1 -1283 4952 4838 734 265 0 15 chr2 117192416 117192616 -136063967 - L1ME1 LINE L1 -1505 4710 4514 432 0 0 0 chr2 117192701 117192749 -136063834 + (TG)n Simple_repeat Simple_repeat 1 48 0 1219 167 0 5 chr2 117192761 117192947 -136063636 - AluJo SINE Alu -41 271 87 2232 253 92 19 chr2 117192947 117194479 -136062104 - L1ME1 LINE L1 -3932 2464 755 3996 196 112 9 chr2 117194494 117194642 -136061941 - L1MC3 LINE L1 -15 7770 7639 2494 72 3 0 chr2 117194642 117194948 -136061635 - AluY SINE Alu -4 307 1 3996 196 112 9 chr2 117194948 117195728 -136060855 - L1MC3 LINE L1 -146 7639 6746 816 163 0 81 chr2 117195729 117195889 -136060694 - MER46A DNA MER2_type -89 147 1 931 264 0 0 chr2 117195891 117196107 -136060476 - L1ME1 LINE L1 -5645 751 536 1474 263 43 0 chr2 117196150 117196617 -136059966 + L1MEc LINE L1 1925 2411 -3985 1355 109 0 128 chr2 117196642 117196899 -136059684 + AluSc SINE Alu 73 296 -13 1010 264 129 4 chr2 117196912 117197394 -136059189 + L1MEc LINE L1 3027 3568 -2647 5465 153 22 31 chr2 117197505 117198117 -136058466 + L1MB3 LINE L1 4912 5528 -655 2304 105 0 0 chr2 117198117 117198412 -136058171 + AluSq SINE Alu 5 299 -14 5465 153 22 31 chr2 117198412 117199078 -136057505 + L1MB3 LINE L1 5528 6181 -2 230 234 14 28 chr2 117200356 117200437 -136056146 + CT-rich Low_complexity Low_complexity 2 139 0 479 217 2 19 chr2 117201583 117201730 -136054853 - MIR SINE MIR -63 145 21 2462 171 81 0 chr2 117204022 117204489 -136052094 + MLT1D LTR MaLR 1 505 0 399 272 48 20 chr2 117205115 117205262 -136051321 - MIR SINE MIR -78 184 34 298 292 93 26 chr2 117205502 117205728 -136050855 - L2 LINE L2 -229 3043 2793 225 278 10 10 chr2 117205988 117206104 -136050479 + CT-rich Low_complexity Low_complexity 1 116 0 318 98 0 0 chr2 117206106 117206157 -136050426 + (TCC)n Simple_repeat Simple_repeat 2 52 0 1800 157 7 11 chr2 117206159 117206440 -136050143 - AluJb SINE Alu -32 280 1 201 370 60 27 chr2 117206535 117206719 -136049864 - L2 LINE L2 -213 3059 2870 1591 184 103 32 chr2 117207057 117207405 -136049178 - MER93b LTR ERV1 0 373 1 190 172 0 35 chr2 117208091 117208149 -136048434 + (TG)n Simple_repeat Simple_repeat 1 56 0 180 356 0 0 chr2 117209088 117209147 -136047436 - L2 LINE L2 -80 3192 3134 510 287 162 46 chr2 117209584 117209998 -136046585 + L2 LINE L2 2851 3312 -1 611 254 118 68 chr2 117210205 117210560 -136046023 - MLT1H LTR MaLR 0 549 177 448 235 36 60 chr2 117210655 117210823 -136045760 - MLT1H LTR MaLR -376 173 20 220 369 0 0 chr2 117210827 117210911 -136045672 - MIR SINE MIR -177 85 2 261 282 26 0 chr2 117210957 117211035 -136045548 - L2 LINE L2 0 3272 3193 321 301 66 55 chr2 117211569 117211752 -136044831 + MER5A DNA MER1_type 1 185 -4 2016 178 12 0 chr2 117212644 117212987 -136043596 - MER7A DNA MER2_type -1 345 1 559 260 8 0 chr2 117213013 117213140 -136043443 + MER91B DNA MER1_type 3 130 -60 1269 314 92 47 chr2 117213264 117214400 -136042183 - L2 LINE L2 -497 2817 1631 237 308 0 0 chr2 117214434 117214486 -136042097 + MIR SINE MIR 24 75 -187 2087 118 3 0 chr2 117214608 117214913 -136041670 + AluSx SINE Alu 1 306 -6 2040 119 3 0 chr2 117214913 117215206 -136041377 + AluSp SINE Alu 1 294 -19 398 214 22 0 chr2 117215328 117215417 -136041166 - MLT1G1 LTR MaLR 0 595 505 * 765 108 0 0 chr2 117215402 117215504 -136041079 + U6 snRNA snRNA 1 102 -5 1163 257 117 44 chr2 117215553 117215989 -136040594 - MLT1G1 LTR MaLR -82 513 6 1936 133 20 0 chr2 117216200 117216502 -136040081 + AluSg SINE Alu 1 308 -2 223 379 49 23 chr2 117216999 117217263 -136039320 - L2 LINE L2 -1701 1613 1343 378 334 91 63 chr2 117217463 117218067 -136038516 - L2 LINE L2 -2380 934 314 495 255 90 48 chr2 117218083 117218271 -136038312 - L2 LINE L2 -1 3312 3117 556 311 56 77 chr2 117219459 117219902 -136036681 + L2 LINE L2 2227 2660 -654 360 165 35 35 chr2 117219923 117220008 -136036575 - LTR9 LTR ERV1 -85 527 443 391 331 116 50 chr2 117220258 117220578 -136036005 + L2 LINE L2 2932 3272 0 329 264 9 0 chr2 117220578 117220688 -136035895 + GA-rich Low_complexity Low_complexity 2 112 0 2127 117 0 3 chr2 117221275 117221584 -136034999 + AluSq SINE Alu 1 308 -5 267 276 26 13 chr2 117221634 117221710 -136034873 - LTR67 LTR ERVL -382 175 99 193 301 101 53 chr2 117222106 117222278 -136034305 + MIR SINE MIR 23 205 -57 253 245 0 19 chr2 117222708 117222761 -136033822 + MER113 DNA MER1_type? 464 515 -6 9976 179 14 24 chr2 117223139 117223167 -136033416 - L1PB1 LINE L1 -319 6548 6521 1632 95 4 9 chr2 117223167 117223399 -136033184 - L1PB1 LINE L1 -4 6147 5917 9976 179 14 24 chr2 117223399 117224464 -136032119 - L1PB1 LINE L1 -346 6521 5447 5786 36 0 1 chr2 117224464 117225138 -136031445 - SVA Other Other -5 1381 709 9976 179 14 24 chr2 117225138 117226774 -136029809 - L1PB1 LINE L1 -1420 5447 3849 3350 193 184 75 chr2 117226766 117228304 -136028279 - L1PB1 LINE L1 -5158 1705 1 * 1315 62 0 42 chr2 117228316 117228509 -136028074 - AluY SINE Alu -2 309 125 2070 59 7 21 chr2 117228635 117228924 -136027659 + AluY SINE Alu 13 297 -14 423 277 102 15 chr2 117229171 117229308 -136027275 - MIR SINE MIR -102 160 12 2566 116 52 7 chr2 117229437 117229841 -136026742 - MER34B LTR ERV1 0 565 144 2306 93 3 0 chr2 117230334 117230646 -136025937 - AluSp SINE Alu 0 313 1 1024 184 144 68 chr2 117230670 117231023 -136025560 - MLT1B LTR MaLR 0 390 11 2351 120 55 16 chr2 117231107 117231540 -136025043 - LTR7 LTR ERV1 0 450 1 371 254 56 24 chr2 117231592 117231718 -136024865 - MER117 DNA MER1_type -42 155 26 1908 229 81 2 chr2 117231821 117232289 -136024294 + MLT1D LTR MaLR 1 505 0 181 253 67 40 chr2 117233231 117233306 -136023277 + L2 LINE L2 3173 3249 -23 * 457 255 5 69 chr2 117233279 117233475 -136023108 - MIR SINE MIR -4 258 28 215 366 104 57 chr2 117233503 117233820 -136022763 - L2 LINE L2 -86 3186 2855 292 310 99 26 chr2 117234240 117234543 -136022040 - L1ME4a LINE L1 -246 5875 5551 754 239 75 57 chr2 117235319 117235809 -136020774 + L1MEd LINE L1 826 1324 -4881 324 261 39 94 chr2 117235902 117236023 -136020560 + L1MEd LINE L1 1316 1442 -4954 1887 120 0 32 chr2 117236023 117236307 -136020276 + AluSx SINE Alu 1 275 -37 243 0 0 0 chr2 117236313 117236340 -136020243 + (CAAAC)n Simple_repeat Simple_repeat 2 28 0 324 261 39 94 chr2 117236340 117236392 -136020191 + L1MEd LINE L1 1447 1675 -4721 244 149 0 21 chr2 117236439 117236486 -136020097 - L1MA3 LINE L1 -100 6205 6160 1545 174 45 137 chr2 117236543 117236844 -136019739 - MLT1D LTR MaLR 0 505 277 1481 46 10 10 chr2 117236844 117237040 -136019543 - L1PA4 LINE L1 0 6155 5960 1545 174 45 137 chr2 117237040 117237294 -136019289 - MLT1D LTR MaLR -228 277 1 303 328 8 17 chr2 117237524 117237643 -136018940 + L1MEd LINE L1 2023 2140 -4256 2002 99 11 0 chr2 117237728 117238010 -136018573 + AluSp SINE Alu 17 301 -12 392 297 75 20 chr2 117238025 117238372 -136018211 + L1MEd LINE L1 2190 2555 -3660 261 234 0 16 chr2 117238441 117238505 -136018078 - MIR SINE MIR -90 172 110 292 288 147 40 chr2 117239206 117239383 -136017200 + MIR SINE MIR 57 252 -10 323 249 41 130 chr2 117239751 117239920 -136016663 - MIR SINE MIR -75 187 34 281 233 61 0 chr2 117239970 117240070 -136016513 + MIR SINE MIR 99 205 -57 539 259 155 42 chr2 117240145 117240384 -136016199 + LTR16A LTR ERVL 148 413 -37 283 318 57 89 chr2 117241197 117241477 -136015106 + L2 LINE L2 2989 3259 -13 2934 175 22 34 chr2 117241722 117242361 -136014222 + L1MA10 LINE L1 5702 6332 -2 199 70 23 23 chr2 117243233 117243276 -136013307 + (TG)n Simple_repeat Simple_repeat 1 43 0 305 286 78 0 chr2 117243315 117243392 -136013191 - L2 LINE L2 -18 3254 3172 272 242 129 45 chr2 117243445 117243577 -136013006 - L2 LINE L2 -248 3024 2882 340 245 270 37 chr2 117244607 117244770 -136011813 - MIR SINE MIR -34 228 28 304 310 17 22 chr2 117245451 117245589 -136010994 - MIR SINE MIR -65 143 43 898 223 177 48 chr2 117245845 117246218 -136010365 + L2 LINE L2 2890 3310 -3 317 271 47 19 chr2 117247084 117247191 -136009392 - Charlie8 DNA MER1_type -2210 207 98 1905 154 0 0 chr2 117247347 117247639 -136008944 + AluSx SINE Alu 1 292 -20 708 245 101 10 chr2 117247827 117248035 -136008548 - MIR SINE MIR -35 227 1 200 209 0 23 chr2 117248301 117248344 -136008239 + L2 LINE L2 3268 3309 -4 273 183 50 0 chr2 117248575 117248635 -136007948 + MIR SINE MIR 83 145 -63 200 176 0 0 chr2 117248666 117248700 -136007883 + GA-rich Low_complexity Low_complexity 1 34 0 300 70 0 0 chr2 117248930 117248973 -136007610 + (TATG)n Simple_repeat Simple_repeat 2 44 0 470 272 9 9 chr2 117249111 117249225 -136007358 + MER81 DNA DNA 1 114 0 190 267 217 0 chr2 117249482 117249542 -136007041 + MIR SINE MIR 48 120 -142 1083 139 0 0 chr2 117249550 117249730 -136006853 + (TTC)n Simple_repeat Simple_repeat 1 180 0 550 29 0 0 chr2 117249762 117249830 -136006753 - MER41B LTR ERV1 -87 548 481 736 212 109 0 chr2 117251005 117251170 -136005413 - MER63A DNA MER1_type -27 183 1 2193 105 3 0 chr2 117251436 117251741 -136004842 + AluSp SINE Alu 1 306 -7 304 236 0 47 chr2 117252384 117252504 -136004079 + L1ME LINE L1 782 893 -5190 303 200 46 15 chr2 117252504 117252569 -136004014 - MIR SINE MIR -4 258 192 206 268 14 56 chr2 117252674 117252745 -136003838 + L2 LINE L2 3236 3303 -10 323 350 106 6 chr2 117253210 117253390 -136003193 - MIR SINE MIR -19 243 46 181 349 16 0 chr2 117254002 117254065 -136002518 - MIR SINE MIR -147 115 52 2124 116 3 0 chr2 117254391 117254694 -136001889 - AluSx SINE Alu -8 304 1 467 241 48 109 chr2 117254875 117255056 -136001527 + MIR3 SINE MIR 8 187 -21 243 146 0 0 chr2 117255266 117255307 -136001276 + (TCCC)n Simple_repeat Simple_repeat 1 41 0 304 246 45 73 chr2 117255333 117255443 -136001140 - MIR SINE MIR -61 147 41 759 221 133 5 chr2 117255551 117255746 -136000837 + MER58A DNA MER1_type 1 220 -4 268 282 97 58 chr2 117256761 117256864 -135999719 + MIR SINE MIR 130 236 -26 207 209 75 15 chr2 117257310 117257377 -135999206 - MIR SINE MIR -79 183 113 1015 184 5 30 chr2 117257665 117257866 -135998717 - MER3 DNA MER1_type -13 196 1 279 322 27 64 chr2 117257926 117258129 -135998454 + MIR SINE MIR 38 234 -28 229 353 81 15 chr2 117258673 117258809 -135997774 + MIR3 SINE MIR 54 198 -10 494 254 149 54 chr2 117259596 117260038 -135996545 - MLT1H LTR MaLR -26 523 1 2186 90 0 3 chr2 117260584 117260872 -135995711 + AluSg SINE Alu 1 287 -23 326 300 36 21 chr2 117262223 117262363 -135994220 + L2 LINE L2 3123 3264 -8 678 246 60 17 chr2 117262621 117262853 -135993730 + L1ME3A LINE L1 5704 5945 -225 220 295 54 31 chr2 117263276 117263405 -135993178 + MIR3 SINE MIR 30 161 -47 185 385 0 0 chr2 117263674 117263739 -135992844 + MIR SINE MIR 84 148 -114 288 358 75 0 chr2 117263936 117264070 -135992513 + MIR SINE MIR 8 151 -111 394 218 282 7 chr2 117264200 117264342 -135992241 + MER5A DNA MER1_type 9 189 0 2309 128 3 0 chr2 117264356 117264668 -135991915 + AluSq SINE Alu 1 313 0 2010 159 7 7 chr2 117264808 117265110 -135991473 + AluSx SINE Alu 1 302 -10 418 252 8 46 chr2 117265181 117265312 -135991271 + L2 LINE L2 3188 3313 0 1621 229 31 39 chr2 117265429 117265948 -135990635 - LTR55 LTR ERV -1 547 33 379 265 61 10 chr2 117266220 117266318 -135990265 + MIR3 SINE MIR 58 160 -48 283 265 29 39 chr2 117266327 117266429 -135990154 - MER5B DNA MER1_type -24 154 54 773 150 8 23 chr2 117267041 117267174 -135989409 - FLAM_C SINE Alu -2 131 1 218 79 0 26 chr2 117268431 117268469 -135988114 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 3615 107 35 4 chr2 117268469 117268827 -135987756 - L1PB1 LINE L1 -9 6142 5760 222 58 0 58 chr2 117268827 117268879 -135987704 + (TA)n Simple_repeat Simple_repeat 1 49 0 3615 107 35 4 chr2 117268879 117269060 -135987523 - L1PB1 LINE L1 -391 5760 5586 517 248 42 113 chr2 117269078 117269301 -135987282 + L2 LINE L2 2935 3131 -182 2182 86 24 0 chr2 117269301 117269591 -135986992 + AluSp SINE Alu 5 301 -12 517 248 42 113 chr2 117269591 117269678 -135986905 + L2 LINE L2 3131 3223 -90 1582 136 115 14 chr2 117270706 117270985 -135985598 + AluJo SINE Alu 1 307 -5 2830 213 51 43 chr2 117271184 117271777 -135984806 - L1ME2 LINE L1 -36 6128 5524 2121 104 0 80 chr2 117271777 117272115 -135984468 + AluSx SINE Alu 1 311 -1 2830 213 51 43 chr2 117272115 117272362 -135984221 - L1ME2 LINE L1 -640 5524 5281 6831 184 16 15 chr2 117272378 117275124 -135981459 - L1MA2 LINE L1 0 7723 3342 463 185 0 0 chr2 117275128 117275209 -135981374 - AluS SINE Alu -12 300 220 19336 133 28 26 chr2 117275209 117275377 -135981206 - L1M1 LINE L1 -4220 3345 3179 1990 160 0 0 chr2 117275377 117275671 -135980912 + AluJb SINE Alu 1 294 -18 19336 133 28 26 chr2 117275671 117276484 -135980099 - L1M1 LINE L1 -4386 3179 2369 1958 165 3 0 chr2 117276484 117276781 -135979802 + AluSx SINE Alu 1 298 -14 19336 133 28 26 chr2 117276781 117279004 -135977579 - L1M1 LINE L1 -5196 2369 132 2294 74 40 0 chr2 117279004 117279300 -135977283 - AluSp SINE Alu -5 308 1 19336 133 28 26 chr2 117279300 117279419 -135977164 - L1M1 LINE L1 -7433 132 15 1622 192 69 0 chr2 117279422 117279786 -135976797 - L1M4 LINE L1 -542 5576 5188 506 213 92 18 chr2 117279794 117279958 -135976625 - L1M4 LINE L1 -1194 4886 4711 * 1407 232 116 66 chr2 117279931 117280465 -135976118 - L1M4 LINE L1 -3182 2898 2310 2244 142 0 0 chr2 117280465 117280776 -135975807 - AluSx SINE Alu -1 311 1 1407 232 116 66 chr2 117280776 117281034 -135975549 - L1M4 LINE L1 -3770 2310 2066 308 287 74 8 chr2 117281035 117281157 -135975426 - L1M4 LINE L1 -4169 2092 1963 740 261 109 45 chr2 117281161 117281594 -135974989 - L1M4 LINE L1 -4379 1882 1404 1937 143 4 0 chr2 117281594 117281894 -135974689 + AluSx SINE Alu 1 301 0 740 261 109 45 chr2 117281894 117282008 -135974575 - L1M4 LINE L1 -4857 1404 1299 492 187 138 16 chr2 117282012 117282135 -135974448 - LTR40b LTR ERVL -1 461 324 1345 78 0 0 chr2 117282159 117282326 -135974257 - AluY SINE Alu -9 302 136 2461 80 0 0 chr2 117282412 117282713 -135973870 + AluY SINE Alu 1 301 -10 550 312 33 15 chr2 117282919 117283252 -135973331 - L1M4 LINE L1 -5398 863 525 312 344 38 25 chr2 117283414 117283571 -135973012 - L1M4 LINE L1 -5584 486 328 2979 138 63 28 chr2 117283829 117284338 -135972245 + MER1A DNA MER1_type 1 527 0 529 217 211 12 chr2 117284357 117284523 -135972060 + MIR SINE MIR 63 261 -1 1968 128 76 173 chr2 117284639 117285164 -135971419 + MER101 LTR ERV1 1 474 0 236 198 37 49 chr2 117285703 117285784 -135970799 + C-rich Low_complexity Low_complexity 1 80 0 302 285 207 47 chr2 117286965 117287158 -135969425 - L2 LINE L2 0 3313 3090 1469 230 67 37 chr2 117287463 117287893 -135968690 - L2 LINE L2 -4 3309 2867 1451 137 5 0 chr2 117288148 117288359 -135968224 + AluSg/x SINE Alu 86 297 -15 596 100 0 0 chr2 117288445 117288525 -135968058 + MADE1 DNA Mariner 1 80 0 766 270 36 24 chr2 117288676 117288928 -135967655 - MIR SINE MIR -3 259 5 2028 131 20 7 chr2 117289065 117289182 -135967401 + AluSx SINE Alu 1 115 -197 279 0 0 0 chr2 117289182 117289213 -135967370 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 2028 131 20 7 chr2 117289213 117289400 -135967183 + AluSx SINE Alu 115 309 -3 2487 93 3 0 chr2 117289687 117289997 -135966586 + AluSp SINE Alu 1 311 -2 344 303 141 88 chr2 117290024 117290330 -135966253 - L1MC4a LINE L1 -1641 6167 5879 2316 106 3 0 chr2 117290330 117290633 -135965950 - AluSc SINE Alu -5 304 1 1747 134 3 75 chr2 117290633 117290953 -135965630 - AluJo SINE Alu -11 301 4 344 303 141 88 chr2 117290953 117291157 -135965426 - L1MC4a LINE L1 -1928 5880 5629 455 247 105 23 chr2 117291208 117291427 -135965156 - L1MC4a LINE L1 -2279 5529 5293 1445 183 0 82 chr2 117291630 117291936 -135964647 + AluJo SINE Alu 1 281 -31 487 98 244 0 chr2 117292003 117292085 -135964498 - AluSc SINE Alu -14 295 194 1074 110 7 0 chr2 117292086 117292231 -135964352 - AluSq/x SINE Alu -167 146 1 2187 119 0 7 chr2 117292244 117292546 -135964037 - AluSg SINE Alu -10 300 1 40 21 0 0 chr2 117294184 117294231 -135962352 + AT_rich Low_complexity Low_complexity 1 47 0 376 193 76 72 chr2 117294493 117294694 -135961889 - MER34 LTR ERV1 -1 541 450 305 268 88 78 chr2 117294714 117294899 -135961684 - L1ME4a LINE L1 -2 6119 5937 2384 102 0 6 chr2 117294899 117295212 -135961371 + AluSx SINE Alu 1 311 -1 305 268 88 78 chr2 117295212 117295447 -135961136 - L1ME4a LINE L1 -184 5937 5695 231 313 194 25 chr2 117296467 117296627 -135959956 + MIR3 SINE MIR 2 188 -20 432 0 0 0 chr2 117297006 117297054 -135959529 + (CA)n Simple_repeat Simple_repeat 2 49 0 257 309 228 0 chr2 117297146 117297295 -135959288 - L2 LINE L2 -1 3271 3089 300 315 44 39 chr2 117297455 117297658 -135958925 + L2 LINE L2 1900 2103 -1211 647 301 113 79 chr2 117297672 117297773 -135958810 + L2 LINE L2 2240 2336 -977 2133 91 33 0 chr2 117297773 117298094 -135958489 + AluSp SINE Alu 1 330 0 647 301 113 79 chr2 117298094 117298521 -135958062 + L2 LINE L2 2336 2747 -566 2169 129 0 3 chr2 117298521 117298824 -135957759 + AluSx SINE Alu 1 302 -10 2303 106 0 0 chr2 117298824 117299125 -135957458 + AluY SINE Alu 1 301 -10 2185 131 7 0 chr2 117299134 117299425 -135957158 + AluSx SINE Alu 1 293 -19 647 301 113 79 chr2 117299425 117299815 -135956768 + L2 LINE L2 2754 3223 -90 1958 162 137 29 chr2 117299815 117300223 -135956360 - LTR47A LTR ERVL 0 452 1 647 301 113 79 chr2 117300223 117300290 -135956293 + L2 LINE L2 3223 3286 -27 516 241 62 76 chr2 117300507 117300626 -135955957 - MER115 DNA AcHobo -1 692 573 2357 78 7 0 chr2 117300626 117300919 -135955664 + AluSp SINE Alu 2 296 -17 516 241 62 76 chr2 117300919 117301089 -135955494 - MER115 DNA AcHobo -120 573 407 293 278 56 68 chr2 117301233 117301395 -135955188 - MER115 DNA AcHobo -481 212 53 445 268 65 26 chr2 117301692 117301845 -135954738 + MIR SINE MIR 40 198 -64 189 0 0 0 chr2 117303737 117303758 -135952825 + (TC)n Simple_repeat Simple_repeat 2 22 0 334 300 162 38 chr2 117304252 117304436 -135952147 - MIR SINE MIR -13 249 45 239 271 0 0 chr2 117306150 117306209 -135950374 - L2 LINE L2 -64 3249 3191 2155 134 0 0 chr2 117306331 117306621 -135949962 + AluSx SINE Alu 1 290 -22 1007 129 37 0 chr2 117307813 117307976 -135948607 - MER41B LTR ERV1 0 635 467 957 107 7 0 chr2 117307985 117308125 -135948458 - MER41B LTR ERV1 -492 143 3 181 281 22 56 chr2 117308662 117308751 -135947832 - MIR SINE MIR -140 122 37 227 281 132 18 chr2 117308947 117309061 -135947522 + MIR3 SINE MIR 15 141 -67 2183 121 0 33 chr2 117309332 117309639 -135946944 + AluSx SINE Alu 2 298 -14 2035 113 34 0 chr2 117312769 117313061 -135943522 - AluSx SINE Alu -7 305 4 465 318 45 11 chr2 117313388 117313567 -135943016 + MIR3 SINE MIR 14 198 -10 210 259 35 0 chr2 117313658 117313716 -135942867 + C-rich Low_complexity Low_complexity 4 63 0 1833 132 6 50 chr2 117316635 117316953 -135939630 - AluSq SINE Alu -9 304 1 2008 77 44 0 chr2 117316961 117317263 -135939320 - AluYa5 SINE Alu 0 314 1 2593 114 0 3 chr2 117317309 117317678 -135938905 - L1PB1 LINE L1 -2 6149 5782 230 232 12 24 chr2 117317687 117317769 -135938814 + (TA)n Simple_repeat Simple_repeat 2 82 0 3583 133 8 11 chr2 117317770 117318672 -135937911 - L1PB1 LINE L1 -361 5790 4892 465 226 9 0 chr2 117318668 117318783 -135937800 - L1PB1 LINE L1 -1201 4945 4830 * 371 150 0 0 chr2 117318783 117318829 -135937754 + L1MB8 LINE L1 6110 6169 -9 1630 166 3 62 chr2 117318830 117319150 -135937433 - AluJb SINE Alu -11 301 1 1761 157 20 0 chr2 117319669 117319963 -135936620 - AluSx SINE Alu -10 302 3 204 258 0 30 chr2 117321065 117321131 -135935452 + CT-rich Low_complexity Low_complexity 5 68 0 455 316 36 12 chr2 117322484 117322652 -135933931 + MER5A DNA MER1_type 12 183 -6 249 291 250 36 chr2 117322665 117322861 -135933722 + MIR SINE MIR 10 247 -15 1692 179 50 0 chr2 117322889 117323207 -135933376 - Tigger3(Golem) DNA MER2_type 0 3029 2696 374 222 0 89 chr2 117323182 117323272 -135933311 - Tigger3(Golem) DNA MER2_type -2947 82 1 * 306 273 0 39 chr2 117323278 117323355 -135933228 - L2 LINE L2 -13 3259 3186 256 265 20 108 chr2 117323528 117323558 -135933025 + L2 LINE L2 3169 3200 -72 2097 88 20 20 chr2 117323558 117323855 -135932728 - AluSx SINE Alu -14 298 2 256 265 20 108 chr2 117323855 117323926 -135932657 + L2 LINE L2 3200 3261 -11 405 0 0 0 chr2 117323929 117323974 -135932609 + (TGGA)n Simple_repeat Simple_repeat 2 46 0 253 349 28 0 chr2 117325083 117325189 -135931394 - L2 LINE L2 -221 3051 2943 1827 89 0 4 chr2 117326660 117326918 -135929665 - AluSx SINE Alu -5 307 51 476 198 104 0 chr2 117328040 117328146 -135928437 - MIR SINE MIR -55 207 91 2189 105 3 0 chr2 117328210 117328516 -135928067 - AluSx SINE Alu -5 307 1 212 128 0 21 chr2 117331394 117331441 -135925142 + (TG)n Simple_repeat Simple_repeat 2 47 0 241 282 14 28 chr2 117331455 117331526 -135925057 - MIR3 SINE MIR 0 208 139 245 245 186 0 chr2 117331530 117331632 -135924951 - L2 LINE L2 0 3313 3193 292 275 58 42 chr2 117331679 117331799 -135924784 - MER5B DNA MER1_type -36 142 21 2244 101 16 0 chr2 117331943 117332251 -135924332 - AluSq SINE Alu 0 313 1 2174 101 3 3 chr2 117333363 117333659 -135922924 - AluSx SINE Alu -16 296 1 2187 109 0 0 chr2 117333739 117334041 -135922542 + AluSx SINE Alu 1 302 -10 266 122 0 0 chr2 117334089 117334146 -135922437 + L1MD3 LINE L1 7930 8040 -2 655 295 78 0 chr2 117334901 117335118 -135921465 + MIR SINE MIR 27 260 -2 565 319 120 39 chr2 117335247 117335689 -135920894 - MLT1K LTR MaLR -24 564 87 209 305 86 37 chr2 117335751 117335841 -135920742 + L2 LINE L2 3021 3105 -167 2435 62 0 7 chr2 117335841 117336149 -135920434 - AluY SINE Alu -5 306 1 209 305 86 37 chr2 117336149 117336245 -135920338 + L2 LINE L2 3105 3216 -56 1685 98 4 0 chr2 117336321 117336546 -135920037 - AluSg SINE Alu -54 256 31 181 369 0 0 chr2 117336669 117336734 -135919849 + L2 LINE L2 2234 2298 -1016 28 0 0 0 chr2 117337744 117337772 -135918811 + AT_rich Low_complexity Low_complexity 1 28 0 215 277 265 0 chr2 117337777 117337860 -135918723 + L2 LINE L2 3123 3227 -45 183 80 0 0 chr2 117339594 117339619 -135916964 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 228 194 0 65 chr2 117340942 117341004 -135915579 + G-rich Low_complexity Low_complexity 5 62 0 255 136 39 39 chr2 117341685 117341788 -135914795 + GA-rich Low_complexity Low_complexity 1 103 0 358 292 21 0 chr2 117342467 117342563 -135914020 + MIR SINE MIR 52 149 -59 2319 98 0 0 chr2 117342879 117343185 -135913398 - AluSg SINE Alu -4 306 1 271 280 142 24 chr2 117345179 117345374 -135911209 + MIR SINE MIR 15 245 -17 313 293 86 17 chr2 117348816 117348932 -135907651 - MIR SINE MIR -80 182 59 454 336 19 33 chr2 117349429 117349640 -135906943 - MIR SINE MIR -50 212 5 729 253 8 83 chr2 117349785 117350038 -135906545 + MIR SINE MIR 29 262 0 368 303 55 7 chr2 117350411 117350556 -135906027 - MIR3 SINE MIR -38 170 19 180 152 0 0 chr2 117350741 117350774 -135905809 + (CTCA)n Simple_repeat Simple_repeat 3 35 0 1184 282 230 17 chr2 117350890 117351893 -135904690 + L2 LINE L2 1490 2706 -608 742 261 165 23 chr2 117351922 117352274 -135904309 + L2 LINE L2 2907 3308 -5 304 243 14 0 chr2 117352284 117352432 -135904151 + (TGGA)n Simple_repeat Simple_repeat 4 153 0 308 269 94 60 chr2 117352495 117352644 -135903939 + L1MEd LINE L1 958 1111 -5008 227 250 26 0 chr2 117352644 117352653 -135903930 + (TGGA)n Simple_repeat Simple_repeat 2 9 -152 2141 127 0 0 chr2 117352653 117352961 -135903622 + AluSx SINE Alu 1 308 -4 227 250 26 0 chr2 117352961 117353107 -135903476 + (TGGA)n Simple_repeat Simple_repeat 9 161 0 745 10 50 0 chr2 117353180 117353279 -135903304 + (TAAAA)n Simple_repeat Simple_repeat 2 105 0 349 328 60 30 chr2 117353372 117353607 -135902976 + MIR SINE MIR 2 243 -19 186 43 0 0 chr2 117354329 117354352 -135902231 + (GGGA)n Simple_repeat Simple_repeat 3 25 0 208 216 0 0 chr2 117354478 117354515 -135902068 + polypyrimidine Low_complexity Low_complexity 1 37 0 363 44 0 0 chr2 117355037 117355082 -135901501 + (CAT)n Simple_repeat Simple_repeat 3 47 0 229 250 0 0 chr2 117356161 117356209 -135900374 - MER117 DNA MER1_type -48 149 102 358 308 31 8 chr2 117356656 117356786 -135899797 - MER94 DNA DNA -1 133 1 1176 173 18 49 chr2 117356803 117357029 -135899554 - MER20 DNA MER1_type 0 219 1 282 250 0 14 chr2 117357341 117357413 -135899170 - L2 LINE L2 -5 3308 3238 314 298 47 83 chr2 117357545 117357715 -135898868 + MIR SINE MIR 21 182 -65 261 197 0 61 chr2 117358471 117358537 -135898046 + MER117 DNA MER1_type 38 99 -98 2422 77 3 0 chr2 117360103 117360413 -135896170 - AluSp SINE Alu 0 313 3 404 122 0 14 chr2 117361408 117361482 -135895101 + (TCCCC)n Simple_repeat Simple_repeat 2 74 0 2188 109 7 3 chr2 117361787 117362090 -135894493 + AluSc SINE Alu 1 304 -5 266 311 115 27 chr2 117362418 117362601 -135893982 - L3 LINE CR1 -131 1446 1248 281 231 77 0 chr2 117362802 117362893 -135893690 + MIR3 SINE MIR 88 185 -23 2016 127 3 0 chr2 117362898 117363205 -135893378 - AluSg SINE Alu -2 308 1 270 277 161 0 chr2 117365482 117365612 -135890971 - MIR SINE MIR -110 152 2 183 374 70 12 chr2 117365631 117365802 -135890781 - MIR SINE MIR -25 237 57 2148 119 7 10 chr2 117366442 117366745 -135889838 - AluSq SINE Alu -11 302 1 396 301 56 70 chr2 117367036 117367249 -135889334 + MIR SINE MIR 53 262 0 2301 114 0 0 chr2 117367446 117367743 -135888840 - AluSx SINE Alu -15 297 1 232 125 25 0 chr2 117368043 117368083 -135888500 + MIR3 SINE MIR 114 154 -54 194 357 0 0 chr2 117368264 117368334 -135888249 + MIR3 SINE MIR 139 208 0 300 333 53 60 chr2 117369117 117369586 -135886997 - L2 LINE L2 -1 3271 2806 228 220 0 0 chr2 117370959 117371009 -135885574 + (TG)n Simple_repeat Simple_repeat 1 50 0 540 353 118 8 chr2 117371218 117371742 -135884841 + L2 LINE L2 2285 2866 -448 2338 128 0 0 chr2 117371754 117372066 -135884517 - AluSq SINE Alu -1 312 1 188 264 57 0 chr2 117372284 117372337 -135884246 + L2 LINE L2 3134 3189 -83 209 261 9 0 chr2 117372353 117372468 -135884115 + (TGAA)n Simple_repeat Simple_repeat 3 118 0 2165 139 3 0 chr2 117373412 117373721 -135882862 - AluSx SINE Alu -2 310 1 337 184 50 164 chr2 117374472 117374673 -135881910 - MER5B DNA MER1_type 0 178 1 233 272 97 10 chr2 117375618 117375721 -135880862 + MIR SINE MIR 36 147 -61 720 291 36 80 chr2 117376098 117376487 -135880096 - L2 LINE L2 0 3272 2901 204 271 19 84 chr2 117376548 117376655 -135879928 - MIR SINE MIR -115 147 48 2318 92 7 23 chr2 117377052 117377357 -135879226 + AluSp SINE Alu 1 300 -13 2548 76 0 0 chr2 117378361 117378663 -135877920 + AluY SINE Alu 1 302 -9 896 195 16 27 chr2 117378803 117378988 -135877595 - MER5A DNA MER1_type -6 183 1 323 299 60 37 chr2 117379092 117379226 -135877357 - L2 LINE L2 -1 3312 3176 312 314 67 25 chr2 117381846 117382085 -135874498 + L2 LINE L2 2825 3073 -199 248 291 150 82 chr2 117382560 117382866 -135873717 - L2 LINE L2 0 3313 2987 352 369 51 13 chr2 117382875 117383296 -135873287 + L2 LINE L2 2628 3059 -213 871 160 11 0 chr2 117383380 117383555 -135873028 + GA-rich Low_complexity Low_complexity 3 179 0 595 139 17 0 chr2 117383587 117383702 -135872881 + GA-rich Low_complexity Low_complexity 2 118 0 855 260 200 0 chr2 117384486 117384829 -135871754 - LTR50 LTR ERVL -1 794 296 357 248 0 69 chr2 117384944 117385045 -135871538 + L1MC4 LINE L1 6609 6702 -1340 181 395 0 0 chr2 117385253 117385329 -135871254 + MIR SINE MIR 185 260 -2 245 279 23 12 chr2 117385360 117385446 -135871137 - L2 LINE L2 -43 3270 3184 434 332 54 17 chr2 117386157 117386398 -135870185 - MIR SINE MIR 0 262 13 341 284 121 9 chr2 117387913 117388029 -135868554 + MER5B DNA MER1_type 19 147 -31 197 384 0 45 chr2 117388461 117388573 -135868010 - L2 LINE L2 -19 3253 3147 237 226 0 0 chr2 117388672 117388756 -135867827 + (TG)n Simple_repeat Simple_repeat 2 85 0 234 231 0 0 chr2 117389193 117389245 -135867338 + L3 LINE CR1 1523 1574 -3 291 71 0 0 chr2 117389364 117389406 -135867177 + (TG)n Simple_repeat Simple_repeat 1 42 0 203 360 22 0 chr2 117390099 117390188 -135866395 - MIR SINE MIR -91 117 27 2119 111 3 36 chr2 117390308 117390615 -135865968 - AluSq SINE Alu -16 297 1 897 123 0 0 chr2 117390669 117390791 -135865792 - FLAM_C SINE Alu -11 132 11 1772 170 84 0 chr2 117391094 117391453 -135865130 + MLT1C LTR MaLR 79 467 0 237 33 0 0 chr2 117391730 117391760 -135864823 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 307 290 89 32 chr2 117392001 117392125 -135864458 - MIR SINE MIR -75 187 57 196 239 56 28 chr2 117392268 117392339 -135864244 - MER5A DNA MER1_type 0 189 117 * 202 318 111 0 chr2 117392301 117392364 -135864219 + MER5A DNA MER1_type 47 116 -73 263 191 16 0 chr2 117392406 117392469 -135864114 + GA-rich Low_complexity Low_complexity 3 66 0 233 342 96 57 chr2 117393036 117393454 -135863129 - L2 LINE L2 -14 3258 2825 266 321 76 8 chr2 117394165 117394296 -135862287 + L2 LINE L2 3174 3313 0 213 291 19 10 chr2 117396302 117396405 -135860178 + (TG)n Simple_repeat Simple_repeat 2 105 0 655 236 81 0 chr2 117396419 117396567 -135860016 - MER96 DNA MER1_type? -8 167 8 192 216 0 0 chr2 117396609 117396660 -135859923 + (TG)n Simple_repeat Simple_repeat 2 52 0 307 298 74 0 chr2 117396848 117396969 -135859614 + MIR3 SINE MIR 58 187 -21 26 0 0 0 chr2 117398226 117398252 -135858331 + AT_rich Low_complexity Low_complexity 1 26 0 189 284 60 0 chr2 117398539 117398606 -135857977 - MIR SINE MIR -51 211 141 220 285 36 15 chr2 117398840 117398952 -135857631 - MIR SINE MIR -58 150 35 188 214 95 0 chr2 117399979 117400021 -135856562 - MIR SINE MIR -98 164 119 246 204 68 117 chr2 117400268 117400371 -135856212 + MIR SINE MIR 104 201 -61 191 236 55 0 chr2 117400417 117400472 -135856111 - MIR SINE MIR 0 262 205 21 36 0 0 chr2 117402335 117402363 -135854220 + AT_rich Low_complexity Low_complexity 1 28 0 192 77 0 0 chr2 117402507 117402533 -135854050 + (TG)n Simple_repeat Simple_repeat 2 27 0 208 294 0 35 chr2 117402991 117403076 -135853507 + CT-rich Low_complexity Low_complexity 4 85 0 22 0 0 0 chr2 117406281 117406303 -135850280 + GC_rich Low_complexity Low_complexity 1 22 0 285 29 0 0 chr2 117408637 117408671 -135847912 + (TG)n Simple_repeat Simple_repeat 1 34 0 233 296 14 14 chr2 117409719 117409790 -135846793 + MIR3 SINE MIR 103 173 -35 2132 128 3 3 chr2 117409938 117410234 -135846349 - AluSx SINE Alu -16 296 1 319 227 100 64 chr2 117410660 117410770 -135845813 + MER81 DNA DNA 1 114 0 203 269 97 97 chr2 117411135 117411321 -135845262 + MIR SINE MIR 77 262 0 180 0 0 0 chr2 117412129 117412149 -135844434 + (T)n Simple_repeat Simple_repeat 1 20 0 258 323 31 0 chr2 117412161 117412257 -135844326 - MIR SINE MIR -95 167 69 332 311 199 15 chr2 117413156 117413362 -135843221 - MIR SINE MIR -13 249 6 522 299 107 0 chr2 117413996 117414201 -135842382 + MIR SINE MIR 30 255 -7 285 106 128 0 chr2 117414660 117414707 -135841876 + AluSc SINE Alu 199 251 -48 214 169 70 70 chr2 117415237 117415308 -135841275 + MIR SINE MIR 22 92 -116 453 323 98 54 chr2 117415520 117415908 -135840675 - L2 LINE L2 -13 3259 2832 387 89 0 0 chr2 117415908 117415964 -135840619 + (TG)n Simple_repeat Simple_repeat 2 57 0 453 323 98 54 chr2 117415964 117416260 -135840323 - L2 LINE L2 -440 2832 2550 1016 283 26 16 chr2 117416552 117416860 -135839723 + L2 LINE L2 2990 3300 -13 217 244 0 0 chr2 117416929 117416970 -135839613 - L2 LINE L2 -51 3221 3181 1724 157 3 40 chr2 117418044 117418343 -135838240 - AluJo SINE Alu -22 290 3 532 271 114 14 chr2 117418933 117419143 -135837440 + MIR SINE MIR 28 258 -4 234 369 51 45 chr2 117419988 117420145 -135836438 - L2 LINE L2 -13 3259 3102 239 364 16 16 chr2 117420250 117420371 -135836212 - MIR SINE MIR -122 140 20 238 355 104 56 chr2 117420709 117420940 -135835643 + L2 LINE L2 3031 3272 0 464 276 52 35 chr2 117421529 117421703 -135834880 - MIR SINE MIR -65 197 21 294 263 42 11 chr2 117422158 117422253 -135834330 + L2 LINE L2 3200 3297 -16 723 24 0 0 chr2 117422910 117422916 -135833667 + (TTCC)n Simple_repeat Simple_repeat 1 91 0 723 24 0 0 chr2 117422916 117423001 -135833582 + (TTCC)n Simple_repeat Simple_repeat 4 88 0 504 369 55 12 chr2 117423401 117423726 -135832857 + L3 LINE CR1 948 1286 -291 2886 49 11 8 chr2 117423891 117424259 -135832324 - L1PB1 LINE L1 -10 6141 5773 186 280 0 20 chr2 117424403 117424453 -135832130 - MER5B DNA MER1_type -129 49 1 901 236 6 0 chr2 117424511 117424685 -135831898 + MER5A DNA MER1_type 13 187 -2 21 57 0 0 chr2 117424695 117424730 -135831853 + AT_rich Low_complexity Low_complexity 1 35 0 1921 221 36 58 chr2 117424770 117425318 -135831265 + MLT1F LTR MaLR 6 541 -1 753 12 0 0 chr2 117425428 117425514 -135831069 + (TTC)n Simple_repeat Simple_repeat 2 87 0 537 30 0 0 chr2 117426280 117426347 -135830236 + (CA)n Simple_repeat Simple_repeat 2 68 0 361 238 33 29 chr2 117426385 117426490 -135830093 + MIR3 SINE MIR 98 206 -2 2051 165 108 25 chr2 117427064 117427500 -135829083 + MLT2B1 LTR ERVL 1 472 -48 284 137 0 110 chr2 117427580 117427653 -135828930 + MLT2B1 LTR ERVL 456 520 0 225 0 0 0 chr2 117427976 117428001 -135828582 + (TC)n Simple_repeat Simple_repeat 2 26 0 1504 228 87 27 chr2 117428128 117428567 -135828016 - MLT1C LTR MaLR 0 467 3 252 0 0 0 chr2 117429092 117429120 -135827463 + (CA)n Simple_repeat Simple_repeat 2 29 0 1078 198 69 88 chr2 117429424 117429787 -135826796 + MLT1A1 LTR MaLR 4 359 -6 326 286 123 19 chr2 117431382 117431536 -135825047 - MIR SINE MIR -12 250 81 22 0 0 0 chr2 117432441 117432463 -135824120 + AT_rich Low_complexity Low_complexity 1 22 0 222 309 118 15 chr2 117433675 117433811 -135822772 + MIR3 SINE MIR 55 204 -4 531 247 17 9 chr2 117434856 117434990 -135821593 + MIR SINE MIR 20 154 -54 385 200 222 0 chr2 117435537 117435627 -135820956 - MER5B DNA MER1_type -1 177 68 646 229 14 0 chr2 117435823 117435967 -135820616 - L1ME1 LINE L1 -4 6162 6017 267 186 34 0 chr2 117435967 117436026 -135820557 - MER5B DNA MER1_type -114 64 4 209 304 38 25 chr2 117436138 117436217 -135820366 - MER5A DNA MER1_type -99 90 11 * 213 217 0 72 chr2 117436194 117436263 -135820320 - MIR3 SINE MIR -49 159 96 198 343 14 14 chr2 117436678 117436748 -135819835 - MIR3 SINE MIR -9 199 130 320 267 171 86 chr2 117437060 117437352 -135819231 + L3 LINE CR1 1158 1474 -103 247 325 133 0 chr2 117437863 117437983 -135818600 + MIR3 SINE MIR 64 199 -9 305 179 202 0 chr2 117438813 117438897 -135817686 - MER117 DNA MER1_type -78 119 19 523 309 30 20 chr2 117440187 117440388 -135816195 - MIR3 SINE MIR -2 206 4 355 239 42 92 chr2 117440583 117440725 -135815858 - MIR SINE MIR -59 203 69 431 232 11 11 chr2 117441015 117441110 -135815473 + MIR SINE MIR 38 132 -130 745 256 159 7 chr2 117441112 117441389 -135815194 - LTR16A LTR ERVL -39 411 93 374 320 13 24 chr2 117442019 117442183 -135814400 - MIR SINE MIR -67 141 24 241 243 27 14 chr2 117444163 117444237 -135812346 + GA-rich Low_complexity Low_complexity 4 78 0 363 340 76 65 chr2 117444677 117445033 -135811550 - L2 LINE L2 -5 3267 2908 300 289 61 18 chr2 117445106 117445220 -135811363 - MIR SINE MIR -125 137 19 743 206 0 8 chr2 117445776 117445902 -135810681 - FLAM_A SINE Alu -8 125 1 273 308 11 0 chr2 117446411 117446502 -135810081 + CT-rich Low_complexity Low_complexity 4 95 0 197 128 0 26 chr2 117446504 117446543 -135810040 + (TTTC)n Simple_repeat Simple_repeat 3 40 0 628 229 119 25 chr2 117446769 117446970 -135809613 + MIR SINE MIR 20 239 -23 451 227 21 0 chr2 117447614 117447711 -135808872 - MIR3 SINE MIR -1 207 109 186 275 0 0 chr2 117447910 117447950 -135808633 + L3b LINE CR1 1532 1571 -12 236 240 167 60 chr2 117447981 117448131 -135808452 + L2 LINE L2 3148 3313 0 244 227 23 23 chr2 117449115 117449247 -135807336 + CT-rich Low_complexity Low_complexity 4 135 0 201 298 88 0 chr2 117449247 117449304 -135807279 - L2 LINE L2 -14 3258 3197 202 295 16 0 chr2 117449492 117449553 -135807030 - L2 LINE L2 -212 3060 2999 265 300 67 0 chr2 117450102 117450192 -135806391 + L2 LINE L2 3146 3241 -31 546 249 59 41 chr2 117450853 117451022 -135805561 - MIR SINE MIR -90 172 1 469 272 56 20 chr2 117451219 117451414 -135805169 - MIR SINE MIR -50 212 16 294 282 262 27 chr2 117451819 117451968 -135804615 + MIR SINE MIR 20 203 -59 288 226 140 0 chr2 117451991 117452084 -135804499 - L2 LINE L2 -19 3294 3189 387 287 52 29 chr2 117452608 117452744 -135803839 - MIR SINE MIR -40 222 84 441 0 0 0 chr2 117452792 117452841 -135803742 + (CA)n Simple_repeat Simple_repeat 1 49 0 315 339 0 40 chr2 117453072 117453303 -135803280 + CT-rich Low_complexity Low_complexity 1 221 0 274 294 0 43 chr2 117453292 117453455 -135803128 + C-rich Low_complexity Low_complexity 3 158 0 * 273 236 46 68 chr2 117454533 117454616 -135801967 - L1ME4a LINE L1 -177 5944 5861 2736 33 0 0 chr2 117454616 117454922 -135801661 - AluY SINE Alu -5 306 1 273 236 46 68 chr2 117454922 117455075 -135801508 - L1ME4a LINE L1 -260 5861 5713 2453 82 0 0 chr2 117455102 117455406 -135801177 - AluY SINE Alu -7 304 1 1775 181 63 26 chr2 117455434 117455816 -135800767 - MSTD LTR MaLR 0 396 1 316 313 17 26 chr2 117458217 117458332 -135798251 - L2 LINE L2 -17 3255 3142 195 326 98 33 chr2 117458660 117458752 -135797831 - MIR SINE MIR -88 120 23 357 285 117 0 chr2 117458766 117458903 -135797680 + Charlie1 DNA MER1_type 1 153 -2608 576 146 10 0 chr2 117458908 117459004 -135797579 + Charlie1 DNA MER1_type 2081 2177 -584 267 103 0 0 chr2 117459005 117459044 -135797539 + (TC)n Simple_repeat Simple_repeat 1 39 0 414 343 120 5 chr2 117459520 117459736 -135796847 + MIR SINE MIR 22 262 0 282 320 131 8 chr2 117459835 117459957 -135796626 - MER5A DNA MER1_type 0 189 53 198 71 0 0 chr2 117460095 117460123 -135796460 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 190 370 76 11 chr2 117460248 117460340 -135796243 + MIR SINE MIR 87 184 -78 195 133 0 89 chr2 117460432 117460477 -135796106 + L3 LINE CR1 1271 1311 -266 377 261 0 43 chr2 117462570 117462662 -135793921 - L2 LINE L2 0 3313 3226 452 244 67 0 chr2 117463827 117463946 -135792637 - MIR SINE MIR -11 251 125 566 304 30 0 chr2 117464276 117464444 -135792139 + MIR SINE MIR 84 256 -6 195 39 0 0 chr2 117464457 117464483 -135792100 - MIR SINE MIR -123 139 114 181 247 14 110 chr2 117465213 117465286 -135791297 - L2 LINE L2 -2864 450 385 270 230 23 35 chr2 117467496 117467583 -135789000 + CT-rich Low_complexity Low_complexity 2 87 0 271 319 22 102 chr2 117467586 117467900 -135788683 - L2 LINE L2 -35 3237 2949 240 308 147 47 chr2 117468471 117468831 -135787752 - L3 LINE CR1 -3 1574 1179 21 0 0 0 chr2 117470660 117470681 -135785902 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr2 117470878 117470906 -135785677 + AT_rich Low_complexity Low_complexity 1 28 0 234 277 15 0 chr2 117471476 117471541 -135785042 + L2 LINE L2 3186 3251 -21 229 267 0 0 chr2 117471541 117471586 -135784997 + polypurine Low_complexity Low_complexity 1 45 0 181 362 40 13 chr2 117471894 117472043 -135784540 + MIR SINE MIR 97 249 -13 2253 123 0 0 chr2 117473263 117473565 -135783018 - AluSq SINE Alu -11 302 1 1036 288 62 22 chr2 117473768 117473867 -135782716 - L1M LINE L1 -743 5403 5309 186 43 0 0 chr2 117473867 117473890 -135782693 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1036 288 62 22 chr2 117473890 117474400 -135782183 - L1M LINE L1 -837 5309 4786 387 286 55 16 chr2 117474548 117474730 -135781853 + MIR SINE MIR 50 238 -24 648 0 0 0 chr2 117475847 117475919 -135780664 + (CA)n Simple_repeat Simple_repeat 1 72 0 377 360 71 29 chr2 117477974 117478285 -135778298 + L3 LINE CR1 1033 1356 -221 840 256 31 18 chr2 117478324 117478551 -135778032 + MIR SINE MIR 29 258 -4 528 16 0 0 chr2 117478574 117478635 -135777948 + (CAT)n Simple_repeat Simple_repeat 2 62 0 232 331 97 19 chr2 117478639 117478793 -135777790 + L3 LINE CR1 1387 1552 -25 2220 126 0 0 chr2 117479386 117479696 -135776887 + AluY SINE Alu 1 310 -1 1727 221 79 25 chr2 117479848 117480318 -135776265 - L1ME1 LINE L1 -5 6161 5667 214 320 50 30 chr2 117481752 117481885 -135774698 + MIR SINE MIR 17 152 -81 2079 224 53 32 chr2 117481967 117482498 -135774085 - MLT1F LTR MaLR 0 542 1 251 257 0 9 chr2 117485246 117485359 -135771224 + (TA)n Simple_repeat Simple_repeat 2 113 0 206 128 26 0 chr2 117485398 117485437 -135771146 + (CATATA)n Simple_repeat Simple_repeat 5 44 0 226 132 0 38 chr2 117485440 117485493 -135771090 - L1MC4 LINE L1 -1339 6703 6653 269 247 75 0 chr2 117485651 117485744 -135770839 - MIR SINE MIR -147 115 16 882 239 52 0 chr2 117486243 117486456 -135770127 - MER58A DNA MER1_type 0 224 1 330 277 98 0 chr2 117486481 117486593 -135769990 - MIR3 SINE MIR -8 200 78 336 24 0 0 chr2 117487177 117487218 -135769365 + (TG)n Simple_repeat Simple_repeat 1 41 0 197 342 0 13 chr2 117487997 117488073 -135768510 + MIR SINE MIR 31 105 -157 1306 264 92 31 chr2 117488331 117488873 -135767710 - L1ME4a LINE L1 -2 6119 5545 371 341 143 26 chr2 117488949 117489412 -135767171 - L3 LINE CR1 -295 1282 766 419 291 43 0 chr2 117490081 117490222 -135766361 - MER115 DNA AcHobo -519 174 28 224 111 22 0 chr2 117491229 117491274 -135765309 + CT-rich Low_complexity Low_complexity 1 46 0 1674 163 17 20 chr2 117491274 117491568 -135765015 - AluJo SINE Alu -19 293 1 205 304 57 88 chr2 117491636 117491687 -135764896 - MIR3 SINE MIR -5 203 152 903 165 43 37 chr2 117491687 117491875 -135764708 + MER5A DNA MER1_type 1 189 0 205 304 57 88 chr2 117491875 117492017 -135764566 - MIR3 SINE MIR -56 152 16 246 316 10 0 chr2 117493383 117493481 -135763102 - MIR SINE MIR -72 136 38 230 246 14 14 chr2 117494686 117494755 -135761828 + MIR SINE MIR 81 149 -113 399 89 0 0 chr2 117494785 117494841 -135761742 + (CCA)n Simple_repeat Simple_repeat 3 58 0 679 313 44 4 chr2 117494858 117495085 -135761498 - MIR SINE MIR -19 243 8 443 289 139 12 chr2 117495691 117495864 -135760719 - MIR SINE MIR -67 195 1 1832 183 77 0 chr2 117496531 117496854 -135759729 - MLT1A1 LTR MaLR -17 348 1 354 333 60 4 chr2 117496912 117497146 -135759437 - L2 LINE L2 -556 2758 2512 222 37 0 0 chr2 117497320 117497347 -135759236 + (T)n Simple_repeat Simple_repeat 1 27 0 1848 125 38 21 chr2 117498308 117498597 -135757986 - AluSg1 SINE Alu -15 294 1 256 246 71 135 chr2 117499189 117499470 -135757113 - L2 LINE L2 -3 3310 3048 189 324 18 45 chr2 117499806 117499917 -135756666 - MER5A DNA MER1_type -8 181 74 * 490 272 0 87 chr2 117499820 117499927 -135756656 + MER5B DNA MER1_type 20 108 -70 2542 71 0 0 chr2 117499927 117500238 -135756345 - AluY SINE Alu 0 311 1 490 272 0 87 chr2 117500238 117500303 -135756280 + MER5B DNA MER1_type 108 177 -1 349 234 47 19 chr2 117500850 117500957 -135755626 - MLT1K LTR MaLR -21 567 458 411 228 24 41 chr2 117500959 117501082 -135755501 - MLT1K LTR MaLR -378 210 90 2378 106 17 28 chr2 117501303 117501662 -135754921 - THE1A LTR MaLR 0 355 1 11983 90 8 2 chr2 117501662 117503232 -135753351 - THE1A-int LTR MaLR 0 1580 1 2603 83 6 25 chr2 117503232 117503594 -135752989 - THE1A LTR MaLR 0 355 1 1254 165 49 15 chr2 117503801 117504802 -135751781 - L1MC1 LINE L1 0 6333 5184 2145 181 28 0 chr2 117504972 117505364 -135751219 - MER57A LTR ERV1 0 403 1 840 137 105 49 chr2 117505398 117505624 -135750959 - LTR54B LTR ERV1 -263 247 2 219 188 12 35 chr2 117505924 117506009 -135750574 + GA-rich Low_complexity Low_complexity 2 84 0 2340 102 0 0 chr2 117506721 117507024 -135749559 - AluSx SINE Alu -9 303 1 199 243 279 29 chr2 117507131 117507267 -135749316 + MER5A DNA MER1_type 4 173 -5 21 0 0 0 chr2 117507703 117507724 -135748859 + AT_rich Low_complexity Low_complexity 1 21 0 1830 75 51 28 chr2 117509037 117509340 -135747243 + AluY SINE Alu 23 331 0 1978 162 73 13 chr2 117509445 117509827 -135746756 + MSTA LTR MaLR 1 385 -41 2525 83 0 6 chr2 117509827 117510139 -135746444 - AluSg SINE Alu 0 310 1 1978 162 73 13 chr2 117510139 117510182 -135746401 + MSTA LTR MaLR 385 424 -2 474 273 50 54 chr2 117510676 117511121 -135745462 - L1MEc LINE L1 -5143 1065 660 326 278 9 28 chr2 117511358 117511466 -135745117 - L1MEc LINE L1 -6213 183 78 455 340 42 0 chr2 117511699 117511890 -135744693 + L3 LINE CR1 1015 1213 -364 843 187 132 62 chr2 117512203 117512460 -135744123 - ORSL DNA AcHobo 0 275 1 423 261 48 61 chr2 117512460 117512839 -135743744 - L1MC5 LINE L1 -285 7676 7303 782 231 26 93 chr2 117513187 117513498 -135743085 + L1MC5 LINE L1 6624 6913 -1048 2198 131 0 0 chr2 117513522 117513834 -135742749 + AluSx SINE Alu 1 312 0 255 146 0 0 chr2 117513850 117513905 -135742678 + (A)n Simple_repeat Simple_repeat 1 55 0 210 258 0 0 chr2 117513942 117514031 -135742552 + GA-rich Low_complexity Low_complexity 2 90 0 951 277 45 38 chr2 117514039 117514526 -135742057 - L1MC/D LINE L1 -745 5401 5127 2624 199 19 65 chr2 117514629 117515273 -135741310 + MER90 LTR ERV1 1 614 0 1363 170 43 119 chr2 117516277 117516671 -135739912 - MLT1A1 LTR MaLR -1 364 1 285 276 90 83 chr2 117517023 117517168 -135739415 - L2 LINE L2 -2 3270 3125 237 327 78 26 chr2 117517604 117517757 -135738826 + L3 LINE CR1 1300 1460 -117 2142 105 7 3 chr2 117517783 117518078 -135738505 + AluSg SINE Alu 1 296 -14 555 288 17 28 chr2 117518994 117519171 -135737412 - MIR3 SINE MIR -23 185 11 2303 74 3 7 chr2 117519292 117519588 -135736995 + AluSc SINE Alu 1 295 -14 9290 30 1 1 chr2 117519909 117521721 -135734862 - L1PA3 LINE L1 -4 6151 4340 536 16 0 0 chr2 117522249 117522312 -135734271 + SVA Other Other 393 455 -931 7443 100 36 0 chr2 117522413 117523442 -135733141 - THE1B-int LTR MaLR -514 1066 1 2332 119 76 15 chr2 117523442 117523785 -135732798 - THE1B LTR MaLR 0 364 1 203 86 0 29 chr2 117524047 117524082 -135732501 + (TA)n Simple_repeat Simple_repeat 2 35 0 26 0 0 0 chr2 117524244 117524270 -135732313 + AT_rich Low_complexity Low_complexity 1 26 0 445 245 110 38 chr2 117524270 117524507 -135732076 + L1ME LINE L1 5546 5799 -322 2638 201 80 11 chr2 117525479 117526115 -135730468 - L1MC4a LINE L1 -3 7805 7126 590 303 91 5 chr2 117526130 117526328 -135730255 - L1ME1 LINE L1 -5 6161 5947 186 121 35 35 chr2 117526707 117526765 -135729818 + T-rich Low_complexity Low_complexity 4 61 0 438 252 67 118 chr2 117526914 117527152 -135729431 + MER102b DNA MER1_type 107 332 -9 34 0 0 0 chr2 117527158 117527192 -135729391 + AT_rich Low_complexity Low_complexity 1 34 0 1703 241 61 51 chr2 117527496 117528105 -135728478 - HAL1 LINE L1 -296 2211 1597 344 260 26 12 chr2 117528112 117528215 -135728368 - MLT1I LTR MaLR -5 445 324 2285 116 0 0 chr2 117528491 117528801 -135727782 - AluSg SINE Alu 0 310 1 1015 91 8 0 chr2 117528801 117528933 -135727650 - AluSg SINE Alu -177 133 1 3604 255 72 65 chr2 117528933 117529094 -135727489 - HAL1 LINE L1 -935 1572 1414 2200 163 10 52 chr2 117529094 117529499 -135727084 + MLT1B LTR MaLR 3 390 0 3604 255 72 65 chr2 117529499 117529981 -135726602 - HAL1 LINE L1 -1093 1414 937 4960 105 24 15 chr2 117529981 117530034 -135726549 - L1MA3 LINE L1 -1 6304 6253 2416 70 10 0 chr2 117530034 117530332 -135726251 - AluSp SINE Alu -11 302 2 4960 105 24 15 chr2 117530332 117531021 -135725562 - L1MA3 LINE L1 -52 6253 5555 3604 255 72 65 chr2 117531021 117531936 -135724647 - HAL1 LINE L1 -1570 937 1 612 266 42 77 chr2 117532298 117532390 -135724193 - MIR SINE MIR -12 250 156 2338 74 0 0 chr2 117532390 117532694 -135723889 + AluSx SINE Alu 1 304 0 612 266 42 77 chr2 117532694 117532859 -135723724 - MIR SINE MIR -106 156 1 557 257 40 14 chr2 117533194 117533342 -135723241 + L2 LINE L2 3121 3272 0 2447 182 24 2 chr2 117533371 117533788 -135722795 + MSTB LTR MaLR 1 426 0 2257 84 125 12 chr2 117533796 117534131 -135722452 - THE1C LTR MaLR -2 373 1 1099 230 149 9 chr2 117534942 117535264 -135721319 + L1ME3A LINE L1 5781 6147 -23 1034 217 39 60 chr2 117536701 117536982 -135719601 - LTR16C LTR ERVL -1 490 216 232 26 26 26 chr2 117537449 117537487 -135719096 + (TAGA)n Simple_repeat Simple_repeat 1 38 0 233 362 38 79 chr2 117538440 117538705 -135717878 + L2 LINE L2 2994 3247 -25 2885 117 45 12 chr2 117538954 117539372 -135717211 - MSTB1 LTR MaLR 0 432 1 765 316 49 11 chr2 117539655 117540127 -135716456 - L1MEc LINE L1 -4598 1798 1309 437 292 117 47 chr2 117541949 117542440 -135714143 - L2 LINE L2 -25 3288 2764 817 220 84 16 chr2 117545003 117545272 -135711311 - LTR48B LTR ERV1 -5 782 360 2438 62 7 0 chr2 117545360 117545665 -135710918 - AluY SINE Alu -4 307 1 568 226 16 8 chr2 117546063 117546187 -135710396 + MSTD LTR MaLR 15 139 -257 26 30 0 0 chr2 117546506 117546539 -135710044 + AT_rich Low_complexity Low_complexity 1 33 0 7922 35 3 0 chr2 117546539 117547894 -135708689 - L1PA5 LINE L1 -8 6146 4788 6852 38 0 0 chr2 117547894 117548695 -135707888 + L1PA5 LINE L1 3977 4777 -1369 2161 153 93 0 chr2 117548696 117549095 -135707488 + Tigger1 DNA MER2_type 1983 2418 0 7578 254 47 21 chr2 117549095 117549732 -135706851 + L1M3b LINE L1 2273 2892 -4673 180 111 0 0 chr2 117549732 117549759 -135706824 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7578 254 47 21 chr2 117549759 117549784 -135706799 + L1M3b LINE L1 2892 2915 -4650 1989 117 0 58 chr2 117549784 117550093 -135706490 + AluSg SINE Alu 1 291 -19 7578 254 47 21 chr2 117550093 117552029 -135704554 + L1M3b LINE L1 2915 4977 -2588 2279 111 0 3 chr2 117552029 117552327 -135704256 - AluSq SINE Alu -16 297 1 7578 254 47 21 chr2 117552327 117553895 -135702688 + L1M3b LINE L1 4977 6503 -1062 5703 44 0 11 chr2 117553912 117554577 -135702006 - SVA Other Other 0 1386 729 9476 91 28 18 chr2 117554689 117555993 -135700590 + THE1B-int LTR MaLR 264 1580 0 2190 108 142 16 chr2 117555993 117556316 -135700267 + THE1B LTR MaLR 1 364 0 24 32 0 0 chr2 117556417 117556448 -135700135 + AT_rich Low_complexity Low_complexity 1 31 0 2071 152 0 3 chr2 117556632 117556941 -135699642 - AluSx SINE Alu -4 308 1 22 35 0 0 chr2 117557226 117557255 -135699328 + AT_rich Low_complexity Low_complexity 1 29 0 2083 131 0 3 chr2 117557535 117557832 -135698751 + AluSq SINE Alu 1 296 -17 1425 130 10 0 chr2 117558096 117558303 -135698280 + AluSq SINE Alu 86 294 -19 254 177 0 16 chr2 117558770 117558832 -135697751 + (TA)n Simple_repeat Simple_repeat 2 62 0 1761 177 0 0 chr2 117558840 117559122 -135697461 - AluJo SINE Alu -30 282 1 810 211 28 22 chr2 117559261 117559441 -135697142 + MLT1A1 LTR MaLR 185 365 0 24 0 0 0 chr2 117560308 117560332 -135696251 + AT_rich Low_complexity Low_complexity 1 24 0 412 208 67 60 chr2 117561005 117561117 -135695466 + MER58 DNA MER1_type 32 144 -2276 1012 152 55 92 chr2 117561117 117561428 -135695155 - MER57A LTR ERV1 0 403 1 432 172 0 133 chr2 117561429 117561557 -135695026 - MER57A-int LTR ERV1 -2 7535 7425 885 198 102 63 chr2 117561557 117561649 -135694934 - LTR54B LTR ERV1 -121 377 290 1917 139 4 0 chr2 117561649 117561915 -135694668 - AluSx SINE Alu -45 267 1 885 198 102 63 chr2 117561915 117562185 -135694398 - LTR54B LTR ERV1 -208 290 1 603 189 25 16 chr2 117562206 117562328 -135694255 + MER58 DNA MER1_type 2294 2416 -4 741 269 54 22 chr2 117562331 117562554 -135694029 + MIR SINE MIR 15 244 -18 2284 111 3 0 chr2 117562766 117563073 -135693510 + AluSg SINE Alu 1 308 -2 2304 146 53 44 chr2 117563336 117563787 -135692796 - L1MB8 LINE L1 -9 6169 5715 1231 172 0 19 chr2 117563902 117564111 -135692472 + AluJo SINE Alu 82 286 -26 191 106 21 106 chr2 117564768 117564815 -135691768 + MIR SINE MIR 84 126 -136 1050 258 111 12 chr2 117564847 117565265 -135691318 + L1ME LINE L1 5357 5815 -347 21 57 0 0 chr2 117565700 117565735 -135690848 + AT_rich Low_complexity Low_complexity 1 35 0 189 284 25 12 chr2 117566688 117566769 -135689814 + MIR SINE MIR 70 151 -111 339 314 133 43 chr2 117567805 117568060 -135688523 + L2 LINE L2 2562 2839 -475 2866 3 0 0 chr2 117568274 117568583 -135688000 - AluYa5 SINE Alu -2 309 1 233 288 137 0 chr2 117568596 117568669 -135687914 + L2 LINE L2 3199 3281 -32 360 214 92 77 chr2 117568985 117569181 -135687402 + L1ME LINE L1 5611 5809 -361 21 0 0 0 chr2 117569542 117569563 -135687020 + AT_rich Low_complexity Low_complexity 1 21 0 26 64 0 0 chr2 117569702 117569749 -135686834 + AT_rich Low_complexity Low_complexity 1 47 0 2278 104 0 3 chr2 117570129 117570438 -135686145 - AluSc SINE Alu -1 308 1 2027 78 0 0 chr2 117571372 117571627 -135684956 - AluY SINE Alu -16 295 41 299 189 68 14 chr2 117572670 117572744 -135683839 + L2 LINE L2 3232 3309 -4 1505 140 4 0 chr2 117573770 117573998 -135682585 + MER2 DNA MER2_type 1 229 -116 21 0 0 0 chr2 117574192 117574213 -135682370 + AT_rich Low_complexity Low_complexity 1 21 0 1898 131 4 4 chr2 117574864 117575139 -135681444 + AluSx SINE Alu 1 275 -37 531 118 0 0 chr2 117575143 117575228 -135681355 + (CA)n Simple_repeat Simple_repeat 2 86 0 469 103 0 15 chr2 117575385 117575453 -135681130 - LTR59 LTR ERV1 -530 67 1 510 266 21 16 chr2 117575662 117575850 -135680733 - L1MC/D LINE L1 -2020 5765 5577 2651 171 60 11 chr2 117575855 117576405 -135680178 - MER34C LTR ERV1 -2 583 7 1163 229 82 20 chr2 117576416 117577027 -135679556 - L1MC/D LINE L1 -745 5401 4898 512 217 9 0 chr2 117577043 117577149 -135679434 + LTR60 LTR ERV1 1 107 -479 2550 46 0 3 chr2 117577260 117577562 -135679021 + AluY SINE Alu 5 305 -6 243 0 0 0 chr2 117578799 117578826 -135677757 + (T)n Simple_repeat Simple_repeat 1 27 0 2602 55 0 0 chr2 117579835 117580143 -135676440 + AluY SINE Alu 1 308 -3 23 33 0 0 chr2 117580193 117580223 -135676360 + AT_rich Low_complexity Low_complexity 1 30 0 206 262 206 40 chr2 117580521 117580647 -135675936 - L2 LINE L2 -4 3268 3122 230 320 39 62 chr2 117580734 117580862 -135675721 - L2 LINE L2 -200 3072 2948 2622 133 88 11 chr2 117582500 117582953 -135673630 + MER50 LTR ERV1 7 494 -240 1902 132 0 0 chr2 117582957 117583215 -135673368 + AluSq SINE Alu 1 258 -55 709 257 47 20 chr2 117583402 117583633 -135672950 - MIR SINE MIR -17 245 13 988 139 0 0 chr2 117584650 117584787 -135671796 - AluSq SINE Alu -93 220 84 210 37 0 0 chr2 117584868 117584895 -135671688 + (TTG)n Simple_repeat Simple_repeat 1 27 0 1825 136 11 0 chr2 117584899 117585171 -135671412 - AluSx SINE Alu -37 275 1 1181 215 160 0 chr2 117585173 117585480 -135671103 - MSTD LTR MaLR -6 390 35 276 73 98 0 chr2 117585513 117585554 -135671029 - MSTD LTR MaLR -383 45 1 612 162 35 131 chr2 117585556 117585693 -135670890 - MSTD-int LTR MaLR -5 1730 1616 1698 164 7 3 chr2 117585693 117585980 -135670603 + AluJb SINE Alu 1 288 -24 612 162 35 131 chr2 117585980 117586040 -135670543 - MSTD-int LTR MaLR -119 1616 1552 2246 79 3 3 chr2 117586174 117586464 -135670119 + AluY SINE Alu 1 290 -21 334 304 108 42 chr2 117586481 117586721 -135669862 + HAL1 LINE L1 1198 1453 -1054 * 2898 128 51 98 chr2 117586712 117587345 -135669238 + L1MB2 LINE L1 5565 6167 -4 740 228 99 47 chr2 117588080 117588313 -135668270 - MIR SINE MIR -13 249 5 209 257 20 40 chr2 117589495 117589596 -135666987 + (TATG)n Simple_repeat Simple_repeat 1 99 0 11465 95 36 17 chr2 117590230 117591383 -135665200 - Tigger1 DNA MER2_type -286 2132 934 2002 110 4 4 chr2 117591383 117591693 -135664890 + AluSg SINE Alu 1 310 0 11465 95 36 17 chr2 117591693 117592251 -135664332 - Tigger1 DNA MER2_type -1484 934 388 775 234 101 54 chr2 117592254 117592570 -135664013 - HAL1b LINE L1 -579 769 439 713 247 144 78 chr2 117592569 117593096 -135663487 - HAL1b LINE L1 -710 638 77 * 189 132 0 0 chr2 117594125 117594163 -135662420 + (TTTTTA)n Simple_repeat Simple_repeat 5 42 0 1246 164 28 5 chr2 117594197 117594411 -135662172 - MER20 DNA MER1_type 0 219 1 2230 107 0 28 chr2 117595993 117596312 -135660271 - AluSx SINE Alu -2 310 1 31 44 0 0 chr2 117597226 117597271 -135659312 + AT_rich Low_complexity Low_complexity 1 45 0 809 56 47 0 chr2 117597956 117598063 -135658520 + L1PA10 LINE L1 6054 6165 -3 287 57 0 0 chr2 117598136 117598171 -135658412 + U2 snRNA snRNA 1 35 -153 2260 98 10 0 chr2 117598482 117598777 -135657806 - AluSx SINE Alu -14 298 1 202 151 0 75 chr2 117600250 117600303 -135656280 + CT-rich Low_complexity Low_complexity 4 52 0 1357 115 126 11 chr2 117600392 117600662 -135655921 - L1MA9 LINE L1 -5 6307 6007 27 0 0 0 chr2 117600837 117600864 -135655719 + AT_rich Low_complexity Low_complexity 1 27 0 290 164 91 0 chr2 117601728 117601783 -135654800 - L2 LINE L2 -4 3309 3250 41 21 0 0 chr2 117603783 117603831 -135652752 + AT_rich Low_complexity Low_complexity 1 48 0 1939 64 42 116 chr2 117603831 117604142 -135652441 - AluSx SINE Alu -24 288 1 793 176 0 0 chr2 117604532 117604657 -135651926 - FLAM_A SINE Alu -8 125 1 26 0 0 0 chr2 117605661 117605687 -135650896 + AT_rich Low_complexity Low_complexity 1 26 0 588 246 181 0 chr2 117606357 117606572 -135650011 + MIR SINE MIR 9 262 0 234 0 0 0 chr2 117608504 117608530 -135648053 + (T)n Simple_repeat Simple_repeat 1 26 0 2602 55 0 0 chr2 117609542 117609850 -135646733 + AluY SINE Alu 1 308 -3 23 33 0 0 chr2 117609900 117609930 -135646653 + AT_rich Low_complexity Low_complexity 1 30 0 206 262 206 40 chr2 117610228 117610354 -135646229 - L2 LINE L2 -4 3268 3122 230 320 39 62 chr2 117610441 117610569 -135646014 - L2 LINE L2 -200 3072 2948 181 336 144 8 chr2 117610635 117610760 -135645823 - L2 LINE L2 -456 2858 2717 1761 124 65 10 chr2 117611892 117612183 -135644400 - AluSx SINE Alu -1 311 5 2235 85 10 20 chr2 117612750 117613055 -135643528 - AluSc SINE Alu -7 302 1 25 0 0 0 chr2 117614197 117614222 -135642361 + AT_rich Low_complexity Low_complexity 1 25 0 29402 32 14 4 chr2 117614243 117620307 -135636276 - L1PA3 LINE L1 0 6155 1 2784 143 17 2 chr2 117620417 117620884 -135635699 - L1MB1 LINE L1 0 6168 5695 1870 169 10 16 chr2 117621028 117621342 -135635241 - AluJo SINE Alu 0 312 1 182 91 30 0 chr2 117621551 117621584 -135634999 + GA-rich Low_complexity Low_complexity 3 36 0 1680 199 7 3 chr2 117622575 117622882 -135633701 - AluJb SINE Alu -4 308 1 1673 157 16 38 chr2 117622887 117623205 -135633378 - AluJo SINE Alu 0 312 2 180 0 0 0 chr2 117623847 117623867 -135632716 + (T)n Simple_repeat Simple_repeat 1 20 0 381 250 30 54 chr2 117626328 117626496 -135630087 - L1MC5 LINE L1 -25 7936 7773 1018 222 117 69 chr2 117626787 117627224 -135629359 - MER39 LTR ERV1 0 707 250 247 273 34 34 chr2 117627201 117627289 -135629294 - LTR48B LTR ERV1 -556 88 1 * 2039 109 28 62 chr2 117627404 117627726 -135628857 - AluSx SINE Alu -1 311 1 361 297 72 0 chr2 117627783 117627894 -135628689 - L1ME3 LINE L1 -79 6083 5965 1829 179 0 7 chr2 117629232 117629523 -135627060 + AluJb SINE Alu 1 289 -23 21 82 0 0 chr2 117629786 117629835 -135626748 + AT_rich Low_complexity Low_complexity 1 49 0 331 153 333 0 chr2 117629839 117629911 -135626672 + Tigger3(Golem) DNA MER2_type 2 97 -2932 * 1272 130 10 24 chr2 117629909 117630116 -135626467 + Tigger3(Golem) DNA MER2_type 2801 3004 -25 2563 143 22 9 chr2 117630128 117630577 -135626006 - L1MB1 LINE L1 0 6168 5714 9380 165 49 5 chr2 117630754 117633935 -135622648 + L1PB1 LINE L1 1093 4557 -2305 6539 124 18 6 chr2 117633941 117635404 -135621179 + L1PB1 LINE L1 5392 6867 0 235 324 73 29 chr2 117636029 117636165 -135620418 + MIR SINE MIR 86 227 -35 600 150 107 43 chr2 117638876 117639016 -135617567 - L1MC3 LINE L1 -448 7337 7189 237 279 0 0 chr2 117639016 117639077 -135617506 - MLT1F1 LTR MaLR -443 124 64 1156 166 87 8 chr2 117639084 117639325 -135617258 - L1MC3 LINE L1 -666 7119 6860 237 128 0 43 chr2 117639327 117639374 -135617209 - L1MC3 LINE L1 -881 6904 6860 22 35 0 0 chr2 117640120 117640149 -135616434 + AT_rich Low_complexity Low_complexity 1 29 0 2555 55 7 3 chr2 117640396 117640706 -135615877 + AluY SINE Alu 1 311 0 757 122 52 0 chr2 117640723 117640838 -135615745 + FLAM_A SINE Alu 1 121 -12 370 219 219 28 chr2 117640939 117641154 -135615429 - MER112 DNA MER1_type 0 256 1 192 163 0 0 chr2 117642110 117642153 -135614430 + GA-rich Low_complexity Low_complexity 2 44 0 237 108 0 0 chr2 117644262 117644299 -135612284 + (TA)n Simple_repeat Simple_repeat 2 38 0 21 0 0 0 chr2 117646542 117646563 -135610020 + GC_rich Low_complexity Low_complexity 1 21 0 695 245 67 62 chr2 117647976 117648108 -135608475 - L1MC5 LINE L1 -135 7826 7696 763 175 0 0 chr2 117648108 117648234 -135608349 + FLAM_C SINE Alu 1 126 -7 695 245 67 62 chr2 117648234 117648517 -135608066 - L1MC5 LINE L1 -265 7696 7409 28 29 0 0 chr2 117649746 117649781 -135606802 + AT_rich Low_complexity Low_complexity 1 35 0 894 269 0 0 chr2 117649902 117650114 -135606469 + MIR SINE MIR 51 262 0 419 316 54 34 chr2 117650568 117650865 -135605718 - L2 LINE L2 -1 3271 2969 2405 176 98 15 chr2 117651069 117652685 -135603898 - SATR1 Satellite Satellite 0 1750 1 2254 182 119 1 chr2 117652718 117653459 -135603124 - SATR1 Satellite Satellite 0 828 1 21 71 0 0 chr2 117653459 117653501 -135603082 + AT_rich Low_complexity Low_complexity 1 42 0 237 254 6 50 chr2 117653553 117653734 -135602849 + (TAA)n Simple_repeat Simple_repeat 1 173 0 1902 208 112 50 chr2 117653853 117654950 -135601633 + SATR1 Satellite Satellite 1 1164 -131 1923 133 30 3 chr2 117654994 117655295 -135601288 - AluSc SINE Alu 0 309 1 1477 258 9 58 chr2 117655296 117655745 -135600838 - L1MEc LINE L1 -5932 464 38 653 218 13 77 chr2 117655746 117655980 -135600603 + MER20B DNA MER1_type 563 781 -2 658 197 16 0 chr2 117655992 117656114 -135600469 + MER94 DNA DNA 1 124 -10 954 238 5 0 chr2 117656591 117656805 -135599778 - MIR SINE MIR 0 262 48 375 304 75 53 chr2 117657125 117657523 -135599060 - L2 LINE L2 -841 2473 2067 1783 194 81 42 chr2 117657670 117658104 -135598479 - MLT1C LTR MaLR -9 458 8 1034 161 16 115 chr2 117659483 117659564 -135597019 + MER20 DNA MER1_type 1 88 -131 1664 137 7 4 chr2 117659564 117659834 -135596749 - L1MB3 LINE L1 -7 6176 5906 1034 161 16 115 chr2 117659834 117659995 -135596588 + MER20 DNA MER1_type 88 219 0 559 253 47 25 chr2 117660032 117660339 -135596244 - MLT1I LTR MaLR -1 408 61 207 88 0 0 chr2 117660458 117660492 -135596091 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1790 146 4 8 chr2 117660515 117660783 -135595800 - AluJb SINE Alu -45 267 1 331 255 80 43 chr2 117661209 117661397 -135595186 + MER117 DNA MER1_type 2 196 -1 613 120 0 2 chr2 117661588 117661847 -135594736 + AluSx SINE Alu 1 307 0 451 263 8 0 chr2 117661853 117661971 -135594612 - L2 LINE L2 -15 3298 3180 1050 241 119 24 chr2 117662214 117662591 -135593992 + L2 LINE L2 2896 3308 -5 1434 131 68 0 chr2 117663059 117663280 -135593303 + AluJb SINE Alu 67 302 -10 256 268 0 14 chr2 117663283 117663354 -135593229 - MIR3 SINE MIR -27 181 112 299 261 134 15 chr2 117664041 117664175 -135592408 + MIR SINE MIR 110 259 -3 1859 140 23 32 chr2 117665123 117665431 -135591152 - AluJb SINE Alu -7 305 1 2438 150 25 10 chr2 117666049 117666448 -135590135 + MER65A LTR ERV1 41 445 0 848 228 22 0 chr2 117666608 117666788 -135589795 + MER5A DNA MER1_type 5 188 -1 207 0 0 0 chr2 117666852 117666875 -135589708 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1148 158 62 34 chr2 117666908 117667117 -135589466 - AluJb SINE Alu -97 215 1 593 239 7 7 chr2 117667135 117667277 -135589306 + MER5B DNA MER1_type 37 178 0 513 207 173 0 chr2 117667291 117667441 -135589142 - MER5A DNA MER1_type -6 183 8 605 228 49 5 chr2 117667722 117667906 -135588677 - MER113 DNA MER1_type? -329 192 1 287 276 62 41 chr2 117668753 117668898 -135587685 + MIR3 SINE MIR 60 207 -1 2078 125 0 0 chr2 117669317 117669605 -135586978 - AluSx SINE Alu -24 288 1 252 0 0 0 chr2 117670740 117670768 -135585815 + (A)n Simple_repeat Simple_repeat 1 28 0 285 29 0 0 chr2 117670902 117670936 -135585647 + (TATG)n Simple_repeat Simple_repeat 1 34 0 4688 170 57 48 chr2 117672388 117672472 -135584111 - L1 LINE L1 -1828 4318 4236 1186 134 5 58 chr2 117672472 117672696 -135583887 - L1PA16 LINE L1 0 6166 5955 4688 170 57 48 chr2 117672696 117673634 -135582949 - L1 LINE L1 -1910 4236 3287 394 301 21 49 chr2 117674348 117674456 -135582127 + MIR SINE MIR 43 148 -114 2278 140 54 11 chr2 117674456 117674807 -135581776 + MER47A DNA MER2_type 1 366 0 394 301 21 49 chr2 117674807 117674841 -135581742 + MIR SINE MIR 148 181 -81 198 325 26 0 chr2 117675124 117675201 -135581382 - MIR SINE MIR -26 236 158 438 304 8 0 chr2 117675370 117675495 -135581088 + MER94 DNA DNA 3 128 -6 292 232 105 32 chr2 117675803 117675898 -135580685 - LTR67 LTR ERVL 0 557 456 2563 194 93 0 chr2 117676327 117676842 -135579741 - MER99 DNA DNA 0 828 266 514 250 18 0 chr2 117677180 117677292 -135579291 - MER99 DNA DNA -714 114 1 883 125 0 29 chr2 117678641 117678777 -135577806 + FLAM_C SINE Alu 1 132 -1 218 268 0 0 chr2 117679008 117679079 -135577504 + (TAA)n Simple_repeat Simple_repeat 3 73 0 739 265 30 10 chr2 117679085 117679285 -135577298 - MIR SINE MIR 0 262 59 322 234 0 0 chr2 117679849 117679913 -135576670 + MIR SINE MIR 80 143 -119 229 244 47 0 chr2 117679913 117679999 -135576584 + L1MC4 LINE L1 6614 6703 -1339 573 138 145 14 chr2 117680273 117680411 -135576172 + MER103 DNA DNA 3 158 -8 444 117 0 0 chr2 117680860 117680920 -135575663 + Alu SINE Alu 239 298 -13 336 258 75 0 chr2 117680941 117681034 -135575549 + MER103 DNA DNA 67 166 0 479 171 163 8 chr2 117681433 117681556 -135575027 - MIR SINE MIR -3 259 118 1429 153 99 0 chr2 117682342 117682584 -135573999 + AluJb SINE Alu 1 266 -46 189 0 0 0 chr2 117682631 117682652 -135573931 + (A)n Simple_repeat Simple_repeat 1 21 0 1746 147 29 13 chr2 117682692 117683005 -135573578 - L1MA7 LINE L1 -8 6283 5966 237 33 0 0 chr2 117684027 117684057 -135572526 + (CA)n Simple_repeat Simple_repeat 2 31 0 23 0 0 0 chr2 117685004 117685027 -135571556 + GC_rich Low_complexity Low_complexity 1 23 0 234 0 0 0 chr2 117685497 117685523 -135571060 + (CA)n Simple_repeat Simple_repeat 2 27 0 1479 189 42 23 chr2 117687382 117687688 -135568895 - AluJb SINE Alu 0 312 1 72 58 0 0 chr2 117687839 117687960 -135568623 + AT_rich Low_complexity Low_complexity 1 121 0 25 0 0 0 chr2 117688128 117688153 -135568430 + AT_rich Low_complexity Low_complexity 1 25 0 415 261 90 68 chr2 117688255 117688485 -135568098 - L1MC4 LINE L1 -89 7953 7730 1617 155 12 8 chr2 117688485 117688737 -135567846 - AluJo SINE Alu -19 293 41 415 261 90 68 chr2 117688737 117689004 -135567579 - L1MC4 LINE L1 -312 7730 7333 1947 201 3 3 chr2 117689005 117689364 -135567219 - MLT1A1 LTR MaLR -6 359 1 256 264 42 0 chr2 117689364 117689436 -135567147 - L1MC5 LINE L1 -630 7331 7257 * 571 267 50 34 chr2 117689413 117689869 -135566714 - L1MC4 LINE L1 -626 7416 6960 2271 119 0 3 chr2 117690411 117690722 -135565861 - AluSx SINE Alu -2 310 1 1163 142 34 39 chr2 117690773 117690978 -135565605 + MER3 DNA MER1_type 2 205 -4 328 167 0 45 chr2 117691241 117691307 -135565276 - MER4B LTR ERV1 -547 63 1 30 0 0 0 chr2 117693239 117693269 -135563314 + AT_rich Low_complexity Low_complexity 1 30 0 730 251 145 43 chr2 117693499 117694098 -135562485 + L1ME4a LINE L1 5362 6024 -97 490 257 13 59 chr2 117694220 117694372 -135562211 + MIR SINE MIR 46 190 -72 207 184 0 0 chr2 117694648 117694686 -135561897 + (CA)n Simple_repeat Simple_repeat 2 39 0 1771 174 7 7 chr2 117696195 117696500 -135560083 - AluJo SINE Alu -7 305 1 338 200 38 0 chr2 117696601 117696681 -135559902 + L1ME4a LINE L1 5774 5856 -265 183 374 60 0 chr2 117699215 117699298 -135557285 - MIR3 SINE MIR -34 174 87 859 267 68 11 chr2 117699479 117699745 -135556838 + MLT1C LTR MaLR 187 467 0 937 239 42 11 chr2 117699769 117700029 -135556554 - MLT1C LTR MaLR 0 467 200 1521 156 8 0 chr2 117700029 117700266 -135556317 - ERVL LTR ERVL -1363 4401 4163 2557 167 15 0 chr2 117700268 117700687 -135555896 - MSTB LTR MaLR -1 413 1 883 156 56 12 chr2 117700687 117700847 -135555736 - ERVL LTR ERVL -1598 4166 4000 578 281 64 100 chr2 117701310 117701701 -135554882 - MLT1J2 LTR MaLR -15 435 59 207 316 53 0 chr2 117701882 117701977 -135554606 + L2 LINE L2 3208 3307 -6 247 313 48 0 chr2 117702059 117702142 -135554441 + L2 LINE L2 2395 2481 -833 331 135 0 0 chr2 117702151 117702203 -135554380 - MLT1F LTR MaLR -1 541 490 457 107 13 0 chr2 117702208 117702283 -135554300 - MLT1F LTR MaLR -185 357 282 418 239 187 0 chr2 117702371 117702526 -135554057 - L2 LINE L2 0 3313 3130 1796 232 60 0 chr2 117702531 117702978 -135553605 - MLT1F LTR MaLR -58 509 1 368 318 75 30 chr2 117702982 117703183 -135553400 + L2 LINE L2 2479 2688 -626 1050 264 94 39 chr2 117703207 117703800 -135552783 - L2 LINE L2 0 3313 2681 270 292 0 14 chr2 117703824 117703896 -135552687 + L2 LINE L2 2716 2786 -528 27 0 0 0 chr2 117703900 117703927 -135552656 + AT_rich Low_complexity Low_complexity 1 27 0 441 0 0 0 chr2 117704106 117704155 -135552428 + (TG)n Simple_repeat Simple_repeat 2 50 0 237 184 0 0 chr2 117704352 117704401 -135552182 - MER5A DNA MER1_type -80 109 61 847 86 40 23 chr2 117704408 117704583 -135552000 + CT-rich Low_complexity Low_complexity 1 178 0 1939 145 3 0 chr2 117704583 117704916 -135551667 - AluSx SINE Alu 0 334 1 243 196 0 0 chr2 117704921 117704967 -135551616 - MER5A DNA MER1_type -118 71 26 735 255 12 0 chr2 117704997 117705158 -135551425 - MER5B DNA MER1_type -14 164 2 217 243 61 89 chr2 117706166 117706280 -135550303 - MIR SINE MIR -89 119 6 240 325 12 0 chr2 117706367 117706447 -135550136 - MIR SINE MIR -61 147 67 478 273 74 42 chr2 117706666 117706977 -135549606 - L1MC5 LINE L1 -140 7821 7501 5457 219 19 12 chr2 117707155 117708572 -135548011 + L1PBa LINE L1 2713 4134 -2728 1905 169 13 0 chr2 117708902 117709203 -135547380 - AluJb SINE Alu -7 305 1 291 386 31 8 chr2 117709366 117709493 -135547090 - L2 LINE L2 -2 3270 3141 196 154 154 19 chr2 117709783 117709835 -135546748 - L2 LINE L2 0 3272 3214 1739 240 91 14 chr2 117709835 117710340 -135546243 + MER45B DNA AcHobo 1 544 -496 416 198 62 0 chr2 117710340 117710421 -135546162 + 5S rRNA rRNA 3 88 -33 2385 194 25 21 chr2 117710422 117710737 -135545846 + MER45B DNA AcHobo 528 840 -741 200 35 35 0 chr2 117710737 117710766 -135545817 + (TTTTA)n Simple_repeat Simple_repeat 1 30 0 2049 111 0 4 chr2 117710766 117711045 -135545538 - AluSg SINE Alu -32 278 1 2385 194 25 21 chr2 117711045 117711239 -135545344 + MER45B DNA AcHobo 839 1040 0 668 303 91 29 chr2 117711264 117711571 -135545012 - L2 LINE L2 -78 3194 2869 565 310 57 63 chr2 117711621 117711749 -135544834 - L2 LINE L2 -556 2758 2631 2166 128 13 0 chr2 117711749 117712055 -135544528 + AluSx SINE Alu 1 310 -2 565 310 57 63 chr2 117712055 117712433 -135544150 - L2 LINE L2 -683 2631 2255 3037 219 77 22 chr2 117712434 117713269 -135543314 + L1ME1 LINE L1 5293 6164 -2 530 246 22 22 chr2 117713340 117713474 -135543109 - MIR SINE MIR -109 153 20 1131 159 5 0 chr2 117714021 117714216 -135542367 + L1P LINE L1 4962 5157 -989 772 97 19 0 chr2 117714216 117714317 -135542266 + L1PA10 LINE L1 6064 6168 0 203 276 60 26 chr2 117714794 117714910 -135541673 + MIR SINE MIR 30 149 -59 244 216 257 0 chr2 117715213 117715287 -135541296 - L2 LINE L2 0 3313 3221 1281 204 0 29 chr2 117715309 117715589 -135540994 + AluJb SINE Alu 40 311 -1 625 315 34 29 chr2 117715595 117715907 -135540676 - L2 LINE L2 -208 3105 2793 1559 232 127 29 chr2 117715920 117716290 -135540293 - MLT1E LTR MaLR -14 579 140 2173 133 0 0 chr2 117716290 117716591 -135539992 - AluSx SINE Alu -11 301 1 1559 232 127 29 chr2 117716591 117716746 -135539837 - MLT1E LTR MaLR -453 140 2 497 276 136 94 chr2 117716750 117717399 -135539184 - MLT1E-int LTR MaLR 0 1371 696 1259 240 31 31 chr2 117717600 117717959 -135538624 - MLT1E-int LTR MaLR -765 606 248 564 173 75 8 chr2 117718023 117718156 -135538427 - L2 LINE L2 -573 2741 2600 226 341 54 16 chr2 117718352 117718481 -135538102 - L2 LINE L2 0 3272 3139 1701 192 36 26 chr2 117718782 117719168 -135537415 - Charlie5 DNA MER1_type 0 2623 2234 947 161 0 0 chr2 117720714 117720857 -135535726 - FLAM_C SINE Alu 0 143 1 282 296 43 17 chr2 117720857 117720972 -135535611 + MIR SINE MIR 87 204 -58 903 268 145 3 chr2 117721286 117721659 -135534924 + MLT1J2 LTR MaLR 25 450 0 260 264 18 36 chr2 117721663 117721773 -135534810 + L2 LINE L2 2943 3050 -222 459 147 0 0 chr2 117722117 117722192 -135534391 - L1P LINE L1 -3116 3030 2956 3835 72 4 0 chr2 117722192 117722697 -135533886 + L1PA6 LINE L1 5640 6154 0 233 273 0 0 chr2 117722715 117722759 -135533824 - AluJ/monomer SINE Alu -258 44 1 2003 179 49 0 chr2 117722767 117723176 -135533407 - L1MB5 LINE L1 0 6174 5746 600 234 122 30 chr2 117723186 117723383 -135533200 - MIR SINE MIR -46 216 2 1987 149 3 3 chr2 117724490 117724786 -135531797 - AluJo SINE Alu -16 296 1 250 275 110 0 chr2 117724838 117724929 -135531654 - MIR SINE MIR -99 163 63 786 240 0 11 chr2 117725090 117725269 -135531314 - MLT1A2 LTR MaLR -25 349 173 577 81 0 20 chr2 117725269 117725368 -135531215 + (GA)n Simple_repeat Simple_repeat 2 98 0 780 181 45 0 chr2 117725374 117725529 -135531054 - MLT1A2 LTR MaLR -212 162 1 837 167 32 16 chr2 117725692 117725878 -135530705 + MER53 DNA DNA 1 189 0 1276 189 27 20 chr2 117726024 117726321 -135530262 - L1MB3 LINE L1 -2 6181 5883 291 316 59 33 chr2 117727912 117728064 -135528519 + MIR SINE MIR 99 254 -8 255 349 131 20 chr2 117728196 117728394 -135528189 + MIR SINE MIR 1 220 -42 1313 137 69 1 chr2 117728683 117728933 -135527650 - MER33 DNA MER1_type -70 254 1 2149 92 4 0 chr2 117729139 117729411 -135527172 - AluSp SINE Alu -40 273 1 180 162 81 0 chr2 117729809 117729846 -135526737 - MIR SINE MIR -121 141 102 296 319 49 38 chr2 117731753 117731938 -135524645 - L2 LINE L2 -1 3312 3126 393 239 307 6 chr2 117731951 117732114 -135524469 - MIR SINE MIR -2 260 49 270 280 231 11 chr2 117732195 117732377 -135524206 - L2 LINE L2 -200 3072 2851 771 274 37 0 chr2 117732861 117733076 -135523507 + MIR SINE MIR 30 252 -10 232 319 44 18 chr2 117734141 117734254 -135522329 - MLT1K LTR MaLR -461 127 12 1144 314 161 17 chr2 117735476 117736173 -135520410 - L3 LINE CR1 -589 988 192 251 322 147 0 chr2 117737140 117737283 -135519300 - L2 LINE L2 -314 2999 2836 203 162 0 0 chr2 117739447 117739484 -135517099 + (CCA)n Simple_repeat Simple_repeat 1 37 0 207 196 0 20 chr2 117740352 117740403 -135516180 + GA-rich Low_complexity Low_complexity 4 53 0 297 230 38 0 chr2 117740841 117740932 -135515651 + MIR SINE MIR 49 143 -65 289 291 19 10 chr2 117744418 117744521 -135512062 + MER5B DNA MER1_type 1 104 -74 450 239 174 31 chr2 117744523 117744714 -135511869 + L1ME LINE L1 5449 5668 -498 3173 106 3 8 chr2 117744737 117745441 -135511142 + TAR1 Satellite telomeric 1 700 -123 344 71 18 0 chr2 117745449 117745505 -135511078 + (TTGGGG)n Simple_repeat Simple_repeat 1 57 0 953 103 0 33 chr2 117745505 117745689 -135510894 + (TTAGGG)n Simple_repeat Simple_repeat 3 180 0 954 69 17 17 chr2 117745689 117745862 -135510721 + (CCCTAA)n Simple_repeat Simple_repeat 3 175 0 956 75 11 33 chr2 117745876 117746238 -135510345 + (CCCTAA)n Simple_repeat Simple_repeat 1 354 0 8964 31 4 4 chr2 117746238 117747601 -135508982 - TAR1 Satellite telomeric -980 1363 1 935 168 89 157 chr2 117747447 117747846 -135508737 - LTR60 LTR ERV1 -37 549 183 * 2788 23 3 0 chr2 117747846 117748150 -135508433 - AluYb8 SINE Alu -9 309 5 935 168 89 157 chr2 117748150 117748209 -135508374 - LTR60 LTR ERV1 -403 183 122 518 217 9 0 chr2 117748261 117748367 -135508216 - LTR60 LTR ERV1 -479 107 1 1120 230 82 20 chr2 117748383 117748994 -135507589 + L1MC/D LINE L1 4898 5546 -745 2531 171 60 11 chr2 117749005 117749555 -135507028 + MER34C LTR ERV1 7 583 -2 482 266 21 16 chr2 117749560 117749748 -135506835 + L1MC/D LINE L1 5577 5765 -2020 3757 135 72 45 chr2 117749957 117750597 -135505986 + MER72 LTR ERV1 1 663 -59 2318 100 3 3 chr2 117750597 117750896 -135505687 + AluSq SINE Alu 3 301 -12 3757 135 72 45 chr2 117750896 117750958 -135505625 + MER72 LTR ERV1 663 722 0 948 247 53 44 chr2 117751358 117751698 -135504885 + MER72-int LTR ERV1 173 515 -4421 666 261 23 25 chr2 117751673 117752037 -135504546 + MER72-int LTR ERV1 620 1063 -3873 * 2108 181 165 35 chr2 117752043 117752394 -135504189 - MLT2B3 LTR ERVL -3 551 118 2073 149 41 6 chr2 117752394 117752756 -135503827 - THE1C LTR MaLR 0 375 1 2108 181 165 35 chr2 117752756 117752890 -135503693 - MLT2B3 LTR ERVL -436 118 3 356 176 29 0 chr2 117752915 117752983 -135503600 - MLT2B3 LTR ERVL -482 72 3 327 206 29 0 chr2 117753008 117753076 -135503507 - MLT2B3 LTR ERVL -482 72 3 327 206 29 0 chr2 117753101 117753169 -135503414 - MLT2B3 LTR ERVL -482 72 3 335 206 29 0 chr2 117753194 117753262 -135503321 - MLT2B3 LTR ERVL -482 72 3 349 191 29 0 chr2 117753287 117753355 -135503228 - MLT2B3 LTR ERVL -482 72 3 335 206 29 0 chr2 117753380 117753448 -135503135 - MLT2B3 LTR ERVL -482 72 3 349 191 29 0 chr2 117753473 117753541 -135503042 - MLT2B3 LTR ERVL -482 72 3 331 191 29 0 chr2 117753566 117753634 -135502949 - MLT2B3 LTR ERVL -482 72 3 321 221 29 0 chr2 117753659 117753727 -135502856 - MLT2B3 LTR ERVL -482 72 3 343 176 29 0 chr2 117753752 117753820 -135502763 - MLT2B3 LTR ERVL -482 72 3 385 147 29 0 chr2 117753845 117753913 -135502670 - MLT2B3 LTR ERVL -482 72 3 280 224 45 0 chr2 117753938 117754005 -135502578 - MLT2B3 LTR ERVL -482 72 3 1462 210 20 27 chr2 117754008 117754455 -135502128 + MER72-int LTR ERV1 1063 1506 -3430 1139 205 82 63 chr2 117755061 117755549 -135501034 + MER72-int LTR ERV1 1699 2195 -2741 2902 221 47 73 chr2 117755558 117755758 -135500825 + MER72-int LTR ERV1 2907 3111 -1825 2259 97 0 0 chr2 117755758 117756057 -135500526 + AluY SINE Alu 4 302 0 2902 221 47 73 chr2 117756057 117756848 -135499735 + MER72-int LTR ERV1 3111 3873 -1063 348 24 0 0 chr2 117756906 117756947 -135499636 + (TG)n Simple_repeat Simple_repeat 2 42 0 1310 262 44 8 chr2 117756967 117757329 -135499254 + LTR10C LTR ERV1 188 562 -29 1772 204 14 5 chr2 117757367 117757734 -135498849 + MER72-int LTR ERV1 3859 4228 -708 273 281 24 37 chr2 117757754 117757836 -135498747 + AluSp SINE Alu 97 177 -126 1553 139 0 0 chr2 117757837 117758060 -135498523 + AluJb SINE Alu 68 290 -22 273 182 9 91 chr2 117758063 117758173 -135498410 + MER72-int LTR ERV1 4275 4375 -561 4790 228 168 20 chr2 117758300 117758705 -135497878 + L1MC3 LINE L1 5762 6106 -1679 1721 176 34 61 chr2 117758705 117759149 -135497434 + MSTB1 LTR MaLR 1 432 0 4790 228 168 20 chr2 117759149 117760505 -135496078 + L1MC3 LINE L1 6106 7784 -1 616 131 0 10 chr2 117761373 117761472 -135495111 + MER4A LTR ERV1 1 98 -566 1721 153 6 7 chr2 117761472 117761818 -135494765 + MER4A LTR ERV1 261 664 0 213 293 0 17 chr2 117762505 117762686 -135493897 + (CCCTAA)n Simple_repeat Simple_repeat 2 179 0 512 294 55 88 chr2 117762925 117763346 -135493237 + MLT1I LTR MaLR 3 409 0 21 36 0 0 chr2 117764490 117764518 -135492065 + AT_rich Low_complexity Low_complexity 1 28 0 203 108 54 0 chr2 117765713 117765750 -135490833 + (TCTA)n Simple_repeat Simple_repeat 2 40 0 818 286 18 0 chr2 117765878 117766098 -135490485 + MER58A DNA MER1_type 1 224 0 274 297 22 0 chr2 117766818 117766909 -135489674 + MIR SINE MIR 54 146 -116 889 86 12 39 chr2 117767279 117767527 -135489056 + (CCCTAA)n Simple_repeat Simple_repeat 6 242 0 185 182 30 0 chr2 117768012 117768045 -135488538 + L3b LINE CR1 1524 1557 -26 267 282 129 18 chr2 117768289 117768452 -135488131 + L2 LINE L2 2448 2628 -686 574 75 54 11 chr2 117768491 117768584 -135487999 + MER4A LTR ERV1 3 99 -565 1401 113 128 26 chr2 117768635 117768901 -135487682 + MER4A LTR ERV1 372 664 0 579 135 21 0 chr2 117769039 117769135 -135487448 + MER4A LTR ERV1 1 98 -566 1772 120 26 22 chr2 117769135 117769479 -135487104 + MER4A LTR ERV1 261 664 0 969 122 54 0 chr2 117770412 117770559 -135486024 + FRAM SINE Alu 8 162 -14 187 254 15 75 chr2 117771184 117771251 -135485332 - L2 LINE L2 -1011 2303 2241 192 40 0 0 chr2 117772232 117772257 -135484326 + (TC)n Simple_repeat Simple_repeat 2 26 0 2345 60 0 13 chr2 117772297 117772598 -135483985 - AluY SINE Alu -14 297 1 558 107 13 0 chr2 117773170 117773245 -135483338 + AluJ/FRAM SINE Alu 217 292 -20 2105 112 16 7 chr2 117773650 117773955 -135482628 - AluSx SINE Alu -4 308 1 410 279 39 39 chr2 117774839 117774993 -135481590 - L2 LINE L2 -220 3093 2940 349 260 52 0 chr2 117775033 117775129 -135481454 - L2 LINE L2 -547 2767 2667 1037 86 172 17 chr2 117775152 117775326 -135481257 - AluSg SINE Alu -109 201 1 318 304 36 9 chr2 117775945 117776057 -135480526 + MIR SINE MIR 8 122 -140 251 218 28 113 chr2 117776100 117776242 -135480341 - MER5B DNA MER1_type -41 137 8 2255 82 0 3 chr2 117778585 117778876 -135477707 + AluSq SINE Alu 1 290 -23 287 234 160 11 chr2 117779076 117779170 -135477413 - MLT1G1 LTR MaLR -141 449 342 376 281 197 40 chr2 117779216 117779465 -135477118 - MLT1G1 LTR MaLR -305 290 3 2600 32 0 3 chr2 117779467 117779777 -135476806 + AluY SINE Alu 1 309 -2 2034 90 3 75 chr2 117781346 117781679 -135474904 + AluSx SINE Alu 1 309 -3 25 51 0 0 chr2 117781720 117781759 -135474824 + AT_rich Low_complexity Low_complexity 1 39 0 1705 169 3 13 chr2 117781761 117782075 -135474508 + AluJb SINE Alu 1 311 -1 1931 119 0 21 chr2 117782100 117782385 -135474198 + AluSx SINE Alu 1 279 -33 1572 143 0 0 chr2 117782392 117782630 -135473953 + AluSx SINE Alu 59 296 -16 1298 180 61 44 chr2 117782631 117782925 -135473658 + AluJo SINE Alu 4 302 0 2062 120 0 3 chr2 117783138 117783437 -135473146 - AluSq SINE Alu -15 298 1 2069 79 45 0 chr2 117785396 117785686 -135470897 - AluSc SINE Alu -6 303 1 599 233 151 27 chr2 117786601 117786820 -135469763 - LTR16A1 LTR ERVL -12 445 200 1056 315 83 35 chr2 117787796 117788576 -135468007 + L1ME1 LINE L1 2 1440 -5128 2421 185 48 46 chr2 117788590 117788674 -135467909 + L1MA10 LINE L1 5748 5830 -504 2064 61 10 51 chr2 117788674 117788996 -135467587 + AluY SINE Alu 1 310 0 2421 185 48 46 chr2 117788996 117789451 -135467132 + L1MA10 LINE L1 5830 6289 -45 3091 171 68 5 chr2 117789484 117790074 -135466509 + L1MB8 LINE L1 5338 5964 -214 1671 186 0 0 chr2 117790229 117790520 -135466063 + AluJo SINE Alu 5 295 -17 306 253 11 11 chr2 117790539 117790634 -135465949 + L1ME1 LINE L1 4257 4351 -2293 2423 43 0 10 chr2 117790635 117790934 -135465649 + AluY SINE Alu 1 296 -15 2126 84 0 14 chr2 117790940 117791237 -135465346 + AluSg SINE Alu 1 293 -17 1295 258 19 19 chr2 117791244 117791616 -135464967 + L1MC3 LINE L1 6490 6861 -924 724 162 0 56 chr2 117791641 117791783 -135464800 + AluJo SINE Alu 4 137 -175 21 0 0 0 chr2 117791783 117791804 -135464779 + AT_rich Low_complexity Low_complexity 1 21 0 2070 212 80 31 chr2 117791804 117792407 -135464176 + L1MC3 LINE L1 6868 7499 -286 1718 218 111 64 chr2 117792449 117792815 -135463768 + L1ME1 LINE L1 4334 4681 -1963 2031 130 0 0 chr2 117792815 117793114 -135463469 + AluSx SINE Alu 1 299 -13 1718 218 111 64 chr2 117793114 117793423 -135463160 + L1ME1 LINE L1 4681 5041 -1603 2146 238 38 55 chr2 117796403 117796538 -135460045 + L1ME LINE L1 4785 4921 -1723 3601 143 28 30 chr2 117796538 117797208 -135459375 - L1MA8 LINE L1 -3 6288 5620 2232 84 3 0 chr2 117797217 117797513 -135459070 - AluY SINE Alu -14 297 1 2146 238 38 55 chr2 117797513 117797853 -135458730 + L1ME LINE L1 4929 5273 -1371 2168 105 0 10 chr2 117797853 117798159 -135458424 + AluSq SINE Alu 1 303 -10 2146 238 38 55 chr2 117798159 117798533 -135458050 + L1ME LINE L1 5273 5802 -842 1063 211 21 5 chr2 117798522 117798909 -135457674 + L1ME1 LINE L1 5591 5982 -682 * 13506 45 82 2 chr2 117798912 117800632 -135455951 + L1PA4 LINE L1 1 1858 -4288 29866 31 3 0 chr2 117801658 117805964 -135450619 + L1PA4 LINE L1 1843 6155 0 2138 246 53 23 chr2 117805962 117806580 -135450003 + L1ME1 LINE L1 5965 6601 -63 * 461 188 0 0 chr2 117806573 117806658 -135449925 + L1ME LINE L1 6096 6180 -484 * 299 281 12 0 chr2 117807403 117807485 -135449098 + L1MC/D LINE L1 5450 5532 -2276 193 344 54 0 chr2 117808468 117808561 -135448022 - MIR SINE MIR 0 262 165 1589 71 5 9 chr2 117809001 117809212 -135447371 - AluSg/x SINE Alu -18 294 85 279 265 0 0 chr2 117810110 117810178 -135446405 + (TA)n Simple_repeat Simple_repeat 2 69 0 555 122 0 0 chr2 117810386 117810476 -135446107 + (TGGGGG)n Simple_repeat Simple_repeat 1 90 0 2299 54 0 0 chr2 117812111 117812407 -135444176 + AluYa5 SINE Alu 1 296 -15 184 308 0 0 chr2 117812677 117812729 -135443854 + L2 LINE L2 3218 3269 -3 2412 61 0 0 chr2 117812881 117813176 -135443407 - AluY SINE Alu -16 295 1 2079 101 0 14 chr2 117813294 117813590 -135442993 - AluSq SINE Alu -21 292 1 718 245 12 130 chr2 117815878 117816286 -135440297 + MER34 LTR ERV1 182 541 -1 2083 91 44 0 chr2 117816612 117816909 -135439674 - AluY SINE Alu -1 310 1 360 272 105 19 chr2 117818382 117818544 -135438039 - MLT1K LTR MaLR -18 570 395 2406 177 14 30 chr2 117818544 117818745 -135437838 + MSTA LTR MaLR 1 204 -224 1887 164 14 29 chr2 117818745 117819092 -135437491 + MER61A LTR ERV1 2 343 0 2406 177 14 30 chr2 117819092 117819325 -135437258 + MSTA LTR MaLR 204 428 0 858 300 58 40 chr2 117819325 117819705 -135436878 - MLT1K LTR MaLR -189 399 13 311 321 119 0 chr2 117819793 117819927 -135436656 + MIR SINE MIR 49 198 -64 205 327 18 55 chr2 117820002 117820112 -135436471 + L2 LINE L2 3208 3313 0 344 229 48 0 chr2 117820336 117820419 -135436164 - MIR3 SINE MIR -41 167 81 195 42 0 0 chr2 117820669 117820693 -135435890 + (TTTTTG)n Simple_repeat Simple_repeat 1 24 0 249 207 0 52 chr2 117821072 117821130 -135435453 - L2 LINE L2 0 3272 3218 329 303 147 0 chr2 117821812 117821921 -135434662 - MIR3 SINE MIR -46 162 38 195 283 141 11 chr2 117821980 117822072 -135434511 - MIR SINE MIR -1 261 158 368 308 80 9 chr2 117822129 117822288 -135434295 - MIR SINE MIR -44 218 44 1010 199 107 14 chr2 117822951 117823167 -135433416 - MLT1A1 LTR MaLR 0 365 130 391 236 28 38 chr2 117823163 117823269 -135433314 - MLT1A1 LTR MaLR -151 214 110 * 769 117 0 0 chr2 117823868 117823971 -135432612 + U6 snRNA snRNA 2 104 -3 286 275 28 9 chr2 117823983 117824092 -135432491 + L1M4 LINE L1 77 187 -6355 2059 107 18 4 chr2 117824172 117824479 -135432104 + AluSq SINE Alu 1 311 0 9053 225 53 88 chr2 117824489 117824934 -135431649 + L1M4 LINE L1 1434 1893 -4771 12925 44 6 2 chr2 117824934 117827215 -135429368 + L1PA5 LINE L1 3855 6147 -7 9053 225 53 88 chr2 117827215 117827271 -135429312 + L1M4 LINE L1 1893 1949 -4715 1723 153 52 0 chr2 117827271 117827558 -135429025 + AluSx SINE Alu 1 302 -10 9053 225 53 88 chr2 117827558 117828312 -135428271 + L1M4 LINE L1 1949 2728 -3936 7002 133 62 21 chr2 117828312 117829015 -135427568 + Tigger3b DNA MER2_type 1 773 -2255 2204 117 0 0 chr2 117829015 117829306 -135427277 + AluSc SINE Alu 1 291 -18 7002 133 62 21 chr2 117829306 117829784 -135426799 + Tigger3b DNA MER2_type 773 1230 -1 9053 225 53 88 chr2 117829784 117829862 -135426721 + L1M4 LINE L1 2728 2807 -3857 2252 96 0 23 chr2 117829862 117830164 -135426419 + AluSx SINE Alu 13 307 -5 9053 225 53 88 chr2 117830164 117830761 -135425822 + L1M4 LINE L1 2807 3424 -3240 1874 143 7 0 chr2 117830761 117831040 -135425543 + AluSx SINE Alu 1 281 -31 1230 146 5 15 chr2 117831042 117831248 -135425335 + AluSp SINE Alu 104 307 -6 9053 225 53 88 chr2 117831248 117831946 -135424637 + L1M4 LINE L1 3425 4146 -2518 1710 175 42 81 chr2 117831946 117832352 -135424231 - MLT1B LTR MaLR 0 390 1 9053 225 53 88 chr2 117832352 117833626 -135422957 + L1M4 LINE L1 4146 5464 -1200 3034 89 8 0 chr2 117833626 117833998 -135422585 + THE1C LTR MaLR 1 375 0 9053 225 53 88 chr2 117833998 117834097 -135422486 + L1M4 LINE L1 5464 5565 -1099 4348 126 8 2 chr2 117834097 117834718 -135421865 - L1PB3 LINE L1 -1 6153 5529 9053 225 53 88 chr2 117834718 117835519 -135421064 + L1M4 LINE L1 5565 6295 -369 2090 137 0 31 chr2 117835886 117836208 -135420375 - AluSx SINE Alu 0 312 1 2256 117 3 0 chr2 117836603 117836912 -135419671 - AluSg SINE Alu 0 310 1 2220 173 16 3 chr2 117837795 117838182 -135418401 + L1MA6 LINE L1 5902 6293 -7 2021 123 0 45 chr2 117838198 117838508 -135418075 + AluSx SINE Alu 1 296 -16 779 238 148 45 chr2 117838522 117838900 -135417683 - L1MC4a LINE L1 -1847 5961 5545 709 221 88 88 chr2 117838923 117839208 -135417375 + L1M4 LINE L1 4958 5242 -904 2148 97 0 49 chr2 117839251 117839559 -135417024 - AluSx SINE Alu -19 293 1 203 265 0 20 chr2 117840003 117840052 -135416531 + MIR SINE MIR 76 123 -139 1278 120 0 0 chr2 117840052 117840235 -135416348 - AluSg/x SINE Alu -2 308 126 21 0 0 0 chr2 117840262 117840283 -135416300 + AT_rich Low_complexity Low_complexity 1 21 0 2022 115 4 4 chr2 117840634 117840913 -135415670 + AluSx SINE Alu 1 279 -33 1048 72 7 7 chr2 117840913 117841065 -135415518 + (GGAA)n Simple_repeat Simple_repeat 1 152 0 429 176 102 0 chr2 117841168 117841276 -135415307 + L1MA8 LINE L1 6171 6289 -2 684 239 40 10 chr2 117841286 117841487 -135415096 + L1MC4 LINE L1 7686 7892 -150 246 274 26 51 chr2 117841570 117841657 -135414926 + L1MD3 LINE L1 7879 7964 -31 2133 132 0 23 chr2 117841657 117841967 -135414616 - AluSx SINE Alu -9 303 1 246 274 26 51 chr2 117841967 117841996 -135414587 + L1MD3 LINE L1 7964 7992 -3 242 175 16 48 chr2 117842015 117842078 -135414505 - FRAM SINE Alu -68 98 38 199 308 84 9 chr2 117842248 117842355 -135414228 + L2 LINE L2 2377 2491 -823 695 134 110 0 chr2 117842458 117842549 -135414034 + L1MB5 LINE L1 6033 6143 -31 2343 68 3 26 chr2 117842549 117842857 -135413726 - AluY SINE Alu -10 301 1 695 134 110 0 chr2 117842857 117842892 -135413691 + L1MB5 LINE L1 6143 6173 -1 22 35 0 0 chr2 117842892 117842921 -135413662 + AT_rich Low_complexity Low_complexity 1 29 0 2384 82 23 0 chr2 117843384 117843688 -135412895 - AluY SINE Alu 0 311 1 1740 147 3 61 chr2 117844026 117844338 -135412245 + AluSx SINE Alu 1 294 -18 196 279 107 7 chr2 117844647 117844766 -135411817 - L2 LINE L2 0 3313 3220 2215 130 0 0 chr2 117844766 117845067 -135411516 + AluSx SINE Alu 1 301 -11 196 279 107 7 chr2 117845067 117845108 -135411475 - L2 LINE L2 -93 3220 3184 286 170 19 0 chr2 117845114 117845167 -135411416 + AluSp SINE Alu 117 170 -133 243 0 0 0 chr2 117845196 117845223 -135411360 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 811 153 23 0 chr2 117845236 117845367 -135411216 + L1MC1 LINE L1 6200 6333 0 2390 62 24 0 chr2 117845771 117846059 -135410524 + AluY SINE Alu 1 295 -16 1786 104 48 41 chr2 117846219 117846416 -135410167 + LTR56 LTR ERV1 128 329 -116 2127 110 10 0 chr2 117846416 117846716 -135409867 + AluSg SINE Alu 1 303 -7 1786 104 48 41 chr2 117846716 117846834 -135409749 + LTR56 LTR ERV1 329 445 0 2075 160 52 4 chr2 117847244 117847678 -135408905 - MER89 LTR ERV1 -4 555 1 194 268 54 18 chr2 117847704 117847760 -135408823 + L2 LINE L2 3205 3262 -10 2304 115 0 3 chr2 117847860 117848173 -135408410 - AluSx SINE Alu 0 312 1 706 132 19 0 chr2 117848393 117848499 -135408084 + LTR23 LTR ERV1 310 417 -20 2384 71 7 0 chr2 117848898 117849193 -135407390 + AluSp SINE Alu 1 297 -16 2226 115 22 6 chr2 117849367 117849689 -135406894 - MER4D LTR ERV1 -576 327 1 339 326 15 8 chr2 117850085 117850217 -135406366 - MLT1H LTR MaLR -246 303 171 504 85 264 78 chr2 117850226 117850355 -135406228 - MER53 DNA DNA 0 189 37 802 256 10 88 chr2 117850385 117850481 -135406102 - MER21B LTR ERV1 -52 811 709 2159 119 3 0 chr2 117850481 117850783 -135405800 - AluSq SINE Alu -10 303 1 802 256 10 88 chr2 117850783 117850983 -135405600 - MER21B LTR ERV1 -154 709 538 2210 175 115 60 chr2 117851000 117851372 -135405211 + LTR8A LTR ERV1 34 450 -277 2145 120 0 0 chr2 117851372 117851691 -135404892 - AluSx SINE Alu 0 320 2 2210 175 115 60 chr2 117851691 117851882 -135404701 + LTR8A LTR ERV1 450 629 -98 1669 239 56 61 chr2 117851936 117852042 -135404541 - MER21B LTR ERV1 -326 537 432 5060 139 3 7 chr2 117852042 117852767 -135403816 + MER72 LTR ERV1 1 722 0 1669 239 56 61 chr2 117852767 117853200 -135403383 - MER21B LTR ERV1 -431 432 1 626 262 46 34 chr2 117853362 117853599 -135402984 + L1ME4a LINE L1 5586 5825 -296 2202 130 0 0 chr2 117853619 117853920 -135402663 - AluSx SINE Alu -1 311 11 304 292 53 0 chr2 117853950 117854063 -135402520 - L2 LINE L2 -11 3302 3184 261 305 12 0 chr2 117854297 117854379 -135402204 - L2 LINE L2 -972 2342 2260 1176 108 0 12 chr2 117854393 117854560 -135402023 + MSTA LTR MaLR 1 165 -263 1283 150 103 9 chr2 117854751 117854984 -135401599 - MSTA LTR MaLR 0 428 174 1873 148 0 24 chr2 117854984 117855154 -135401429 + AluJb SINE Alu 1 162 -155 2347 139 11 8 chr2 117855154 117855507 -135401076 - THE1A LTR MaLR -1 354 1 1873 148 0 24 chr2 117855507 117855660 -135400923 + AluJb SINE Alu 162 317 0 829 149 156 0 chr2 117855660 117855814 -135400769 - MSTA LTR MaLR -250 178 1 9072 178 44 18 chr2 117855817 117857421 -135399162 - MSTA-int LTR MaLR -4 1647 1 1950 153 148 21 chr2 117857421 117857800 -135398783 - MSTA LTR MaLR 0 428 2 2866 144 43 86 chr2 117857876 117858482 -135398101 + LTR49 LTR ERV1 1 580 -15 1672 140 9 4 chr2 117858712 117859165 -135397418 + LTR45 LTR ERV1 1 523 -2 1129 201 44 136 chr2 117859915 117860276 -135396307 + MER63B DNA MER1_type 4 312 -750 1805 146 40 20 chr2 117860276 117860578 -135396005 - AluJb SINE Alu -4 308 1 1129 201 44 136 chr2 117860578 117860693 -135395890 + MER63B DNA MER1_type 312 436 0 1537 221 225 16 chr2 117861144 117861386 -135395197 - MLT1F1 LTR MaLR 0 567 377 1680 185 20 3 chr2 117861386 117861558 -135395025 - AluJo SINE Alu -15 297 116 195 114 0 0 chr2 117861558 117861593 -135394990 + (TG)n Simple_repeat Simple_repeat 2 36 0 1680 185 20 3 chr2 117861593 117861712 -135394871 - AluJo SINE Alu -196 116 1 1537 221 225 16 chr2 117861712 117861922 -135394661 - MLT1F1 LTR MaLR -190 377 20 2250 92 0 7 chr2 117861922 117862217 -135394366 - AluSg SINE Alu -1 309 17 1385 163 86 52 chr2 117862241 117862309 -135394274 - MSTB1 LTR MaLR 0 432 368 1931 160 7 3 chr2 117862309 117862615 -135393968 + AluJb SINE Alu 1 307 -5 1385 163 86 52 chr2 117862615 117862920 -135393663 - MSTB1 LTR MaLR -64 368 5 201 121 0 0 chr2 117864312 117864345 -135392238 + (CA)n Simple_repeat Simple_repeat 2 34 0 2505 46 0 0 chr2 117864362 117864673 -135391910 + AluY SINE Alu 1 311 0 993 304 42 9 chr2 117864835 117865171 -135391412 + MLT1I LTR MaLR 63 409 0 207 329 24 12 chr2 117865185 117865270 -135391313 + L2 LINE L2 2825 2910 -404 845 131 369 0 chr2 117865386 117865554 -135391029 + MER30 DNA MER1_type 1 230 0 2003 136 7 7 chr2 117865682 117865977 -135390606 + AluSx SINE Alu 1 295 -17 1817 182 3 7 chr2 117866206 117866514 -135390069 + AluSx SINE Alu 1 307 -5 240 35 0 0 chr2 117866536 117866565 -135390018 + (TC)n Simple_repeat Simple_repeat 2 30 0 2590 145 61 46 chr2 117867247 117868347 -135388236 - pTR5 LTR ERV1 -132 1440 118 705 212 8 0 chr2 117868492 117868624 -135387959 + MER94 DNA DNA 2 134 0 2404 68 0 3 chr2 117868649 117868941 -135387642 + AluSc SINE Alu 1 291 -18 316 262 175 0 chr2 117869592 117869695 -135386888 + LTR33A LTR ERVL 70 190 -333 295 250 90 0 chr2 117869742 117869842 -135386741 + LTR33A LTR ERVL 277 385 -138 26 50 0 0 chr2 117870383 117870423 -135386160 + AT_rich Low_complexity Low_complexity 1 40 0 2246 116 0 3 chr2 117870935 117871238 -135385345 - AluSx SINE Alu -10 302 1 2299 116 0 3 chr2 117871800 117872110 -135384473 + AluSx SINE Alu 1 309 -3 237 313 24 12 chr2 117872739 117872822 -135383761 - MIR3 SINE MIR -6 202 119 623 119 38 186 chr2 117873054 117873186 -135383397 + MER5A DNA MER1_type 11 102 -87 1730 160 0 20 chr2 117873186 117873480 -135383103 - AluJo SINE Alu -11 301 14 623 119 38 186 chr2 117873480 117873557 -135383026 + MER5A DNA MER1_type 102 189 0 1603 125 18 137 chr2 117873826 117874163 -135382420 + AluSx SINE Alu 2 298 -4 24 0 0 0 chr2 117875600 117875624 -135380959 + AT_rich Low_complexity Low_complexity 1 24 0 2453 34 10 0 chr2 117875701 117875992 -135380591 - AluY SINE Alu -17 294 1 189 0 0 0 chr2 117877127 117877148 -135379435 + (A)n Simple_repeat Simple_repeat 1 21 0 866 153 164 0 chr2 117879046 117879223 -135377360 + MER6B DNA MER2_type 5 210 0 821 177 0 8 chr2 117879329 117879459 -135377124 - FLAM_C SINE Alu -14 129 1 730 294 9 14 chr2 117879555 117879769 -135376814 + HAL1 LINE L1 289 501 -2006 676 239 34 106 chr2 117879776 117880212 -135376371 + HAL1 LINE L1 2100 2504 -3 690 296 25 7 chr2 117880826 117881044 -135375539 - MIR SINE MIR -32 230 19 180 318 32 16 chr2 117881263 117881326 -135375257 - L3b LINE CR1 -17 1566 1503 1491 160 4 42 chr2 117881461 117881724 -135374859 - AluJo SINE Alu -18 294 42 1659 130 4 0 chr2 117881940 117882170 -135374413 + AluSx SINE Alu 50 280 -32 1069 67 22 22 chr2 117882170 117882348 -135374235 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 22 56 0 0 chr2 117883245 117883281 -135373302 + AT_rich Low_complexity Low_complexity 1 36 0 192 185 0 0 chr2 117883423 117883477 -135373106 + A-rich Low_complexity Low_complexity 1 54 0 21 57 0 0 chr2 117884425 117884460 -135372123 + AT_rich Low_complexity Low_complexity 1 35 0 2492 81 3 0 chr2 117885342 117885651 -135370932 - AluSx SINE Alu -2 310 1 243 88 0 0 chr2 117885754 117885788 -135370795 + (CA)n Simple_repeat Simple_repeat 2 35 0 21 71 0 0 chr2 117886573 117886615 -135369968 + AT_rich Low_complexity Low_complexity 1 42 0 311 309 128 0 chr2 117887369 117887518 -135369065 + L3 LINE CR1 1335 1502 -75 470 217 66 0 chr2 117888517 117888623 -135367960 - L2 LINE L2 0 3313 3201 668 248 115 43 chr2 117889480 117889714 -135366869 + MIR SINE MIR 12 262 0 295 242 118 91 chr2 117889983 117890347 -135366236 + LTR16A1 LTR ERVL 76 449 -8 1912 108 66 39 chr2 117890350 117890712 -135365871 + THE1C LTR MaLR 4 375 0 940 193 0 12 chr2 117891374 117891535 -135365048 - AluJo SINE Alu -19 293 135 27 81 0 0 chr2 117891637 117891699 -135364884 + AT_rich Low_complexity Low_complexity 1 62 0 719 178 0 0 chr2 117891699 117891817 -135364766 - FLAM_C SINE Alu -25 118 1 198 139 0 93 chr2 117891981 117892024 -135364559 - MIR3 SINE MIR -39 169 131 27 49 0 0 chr2 117893726 117893767 -135362816 + AT_rich Low_complexity Low_complexity 1 41 0 771 159 32 0 chr2 117893985 117894111 -135362472 - AluJo SINE Alu -172 130 1 2496 223 69 9 chr2 117894174 117894842 -135361741 + L1MC4a LINE L1 7101 7808 0 734 186 93 83 chr2 117895193 117895397 -135361186 - MIR SINE MIR -51 211 6 327 270 130 0 chr2 117895633 117895733 -135360850 - L2 LINE L2 0 3313 3201 961 245 34 13 chr2 117896078 117896315 -135360268 - MIR SINE MIR -1 261 20 806 203 128 0 chr2 117896502 117896689 -135359894 - MER58A DNA MER1_type -13 211 1 233 370 87 7 chr2 117897298 117897436 -135359147 - L2 LINE L2 -1 3271 3123 2168 130 17 12 chr2 117898654 117899000 -135357583 - MER7A DNA MER2_type 0 346 1 1875 142 24 20 chr2 117899539 117899834 -135356749 + AluJb SINE Alu 1 296 -16 225 219 29 114 chr2 117900334 117900439 -135356144 - L1ME LINE L1 -456 5714 5619 2825 160 54 41 chr2 117901357 117901987 -135354596 - L1MA9 LINE L1 -32 6280 5643 1408 168 18 45 chr2 117902116 117902449 -135354134 + MER33 DNA MER1_type 1 324 0 1124 173 129 50 chr2 117902503 117902821 -135353762 + MER2 DNA MER2_type 2 344 0 2282 164 33 16 chr2 117903096 117903522 -135353061 - Tigger2a DNA MER2_type -1 433 1 675 136 23 57 chr2 117903869 117904002 -135352581 - L1MB5 LINE L1 0 6174 6061 2179 110 0 3 chr2 117904002 117904302 -135352281 - AluSc SINE Alu -10 299 1 675 136 23 57 chr2 117904302 117904337 -135352246 - L1MB5 LINE L1 -113 6061 6026 2427 142 29 20 chr2 117904392 117904796 -135351787 + L1MB3 LINE L1 5729 6139 -44 2243 91 10 3 chr2 117904796 117905092 -135351491 + AluSp SINE Alu 1 298 -15 2427 142 29 20 chr2 117905092 117905138 -135351445 + L1MB3 LINE L1 6139 6183 0 208 250 0 19 chr2 117906806 117906858 -135349725 + (TATG)n Simple_repeat Simple_repeat 4 54 0 472 250 54 60 chr2 117907496 117907664 -135348919 - L2 LINE L2 -1 3312 3146 254 369 25 19 chr2 117907742 117907843 -135348740 - MIR SINE MIR -3 259 155 2013 107 7 24 chr2 117907843 117908134 -135348449 + AluSx SINE Alu 1 286 -26 254 369 25 19 chr2 117908134 117908192 -135348391 - MIR SINE MIR -107 155 99 743 224 81 40 chr2 117908857 117909080 -135347503 + AluJo SINE Alu 81 312 0 253 278 28 0 chr2 117909233 117909305 -135347278 + L2 LINE L2 3240 3313 0 234 233 82 27 chr2 117909857 117909930 -135346653 - MIR SINE MIR -76 186 110 357 234 31 109 chr2 117910044 117910063 -135346520 - Charlie1 DNA MER1_type -405 118 99 1729 135 23 8 chr2 117910063 117910322 -135346261 + AluSq SINE Alu 44 306 -7 357 234 31 109 chr2 117910322 117910384 -135346199 - Charlie1 DNA MER1_type -424 99 48 2146 113 7 3 chr2 117910384 117910676 -135345907 + AluSx SINE Alu 3 295 -17 357 234 31 109 chr2 117910676 117910721 -135345862 - Charlie1 DNA MER1_type -475 48 1 234 237 34 0 chr2 117910794 117910853 -135345730 - MIR SINE MIR -150 112 52 240 337 0 0 chr2 117911094 117911177 -135345406 + L1ME LINE L1 5525 5607 -514 2160 110 3 0 chr2 117911186 117911485 -135345098 + AluSx SINE Alu 1 300 -12 241 93 47 0 chr2 117911486 117911529 -135345054 + L1ME4a LINE L1 5820 5864 -314 1911 161 7 3 chr2 117911537 117911842 -135344741 - AluSx SINE Alu -6 306 1 354 227 126 8 chr2 117911880 117911999 -135344584 + L1ME4a LINE L1 5968 6100 -21 2058 102 11 3 chr2 117912181 117912466 -135344117 - AluSc SINE Alu -11 298 12 565 135 0 10 chr2 117912470 117912566 -135344017 - AluJ/FLAM SINE Alu -217 95 1 1572 188 17 7 chr2 117912596 117912884 -135343699 + AluJo SINE Alu 2 292 -20 835 215 67 14 chr2 117912974 117913197 -135343386 + L1MB4 LINE L1 5946 6180 0 184 359 47 31 chr2 117914177 117914238 -135342345 - L2 LINE L2 -18 3254 3195 1648 177 3 10 chr2 117914238 117914543 -135342040 + AluJb SINE Alu 1 303 -9 184 359 47 31 chr2 117914543 117914609 -135341974 - L2 LINE L2 -77 3195 3125 192 40 0 0 chr2 117914713 117914738 -135341845 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 585 251 35 64 chr2 117914786 117914903 -135341680 + L1MC5 LINE L1 6619 6738 -1070 1907 149 0 10 chr2 117914903 117915199 -135341384 + AluSx SINE Alu 1 293 -19 585 251 35 64 chr2 117915199 117915306 -135341277 + L1MC5 LINE L1 6738 6790 -1018 2295 99 0 16 chr2 117915306 117915609 -135340974 + AluSq SINE Alu 2 299 -14 585 251 35 64 chr2 117915609 117915635 -135340948 + L1MC5 LINE L1 6790 6815 -993 342 161 23 35 chr2 117915638 117915725 -135340858 + L1MC5 LINE L1 7123 7208 -753 841 228 85 80 chr2 117915877 117916478 -135340105 + L1MC5 LINE L1 7304 7907 -54 2281 103 10 0 chr2 117916541 117916851 -135339732 - AluSq SINE Alu 0 313 1 492 184 39 0 chr2 117916988 117917091 -135339492 - L1MA9 LINE L1 -4 6308 6202 35 63 0 0 chr2 117917162 117917225 -135339358 + AT_rich Low_complexity Low_complexity 1 63 0 2412 77 0 16 chr2 117917384 117917695 -135338888 + AluSg SINE Alu 1 306 -4 581 265 51 46 chr2 117919611 117919807 -135336776 + MIR SINE MIR 58 254 -8 1891 136 0 7 chr2 117919810 117920104 -135336479 - AluJb SINE Alu -7 305 14 2402 35 0 7 chr2 117920478 117920786 -135335797 + AluY SINE Alu 1 306 0 319 261 54 36 chr2 117920984 117921095 -135335488 + MIR SINE MIR 33 145 -63 241 309 49 37 chr2 117921574 117921655 -135334928 + L3 LINE CR1 1429 1510 -67 199 191 0 43 chr2 117922138 117922185 -135334398 + MER5B DNA MER1_type 7 51 -127 28 29 0 0 chr2 117922516 117922551 -135334032 + AT_rich Low_complexity Low_complexity 1 35 0 359 288 56 16 chr2 117922643 117922768 -135333815 + MIR SINE MIR 50 179 -83 188 246 197 0 chr2 117922780 117922841 -135333742 + L2 LINE L2 3235 3307 -6 21 0 0 0 chr2 117922930 117922951 -135333632 + AT_rich Low_complexity Low_complexity 1 21 0 1914 134 17 3 chr2 117923174 117923464 -135333119 + AluSg SINE Alu 1 294 -16 2227 134 0 0 chr2 117923685 117923991 -135332592 - AluSg SINE Alu -4 306 1 1038 208 37 28 chr2 117924334 117924550 -135332033 + MER20 DNA MER1_type 2 219 0 2048 144 0 0 chr2 117924763 117925061 -135331522 + AluJb SINE Alu 4 301 -11 4787 144 8 79 chr2 117925062 117925655 -135330928 + L1MA8 LINE L1 4482 5115 -1176 1558 182 72 14 chr2 117925655 117925946 -135330637 + AluJo SINE Alu 3 310 -2 4787 144 8 79 chr2 117925946 117926222 -135330361 + L1MA8 LINE L1 5115 5267 -1024 2111 110 7 0 chr2 117926222 117926526 -135330057 + AluSq SINE Alu 1 306 0 4787 144 8 79 chr2 117926526 117926904 -135329679 + L1MA8 LINE L1 5267 5670 -621 1145 203 170 27 chr2 117926905 117927044 -135329539 + MER2 DNA MER2_type 2 120 -225 2141 154 21 24 chr2 117927044 117927420 -135329163 - THE1C LTR MaLR 0 375 1 1145 203 170 27 chr2 117927420 117927580 -135329003 + MER2 DNA MER2_type 120 344 -1 2765 152 20 28 chr2 117927581 117928035 -135328548 + L1MA8 LINE L1 5669 6120 -171 2216 102 0 3 chr2 117928035 117928329 -135328254 + AluY SINE Alu 1 293 -18 2765 152 20 28 chr2 117928329 117928380 -135328203 + L1MA8 LINE L1 6120 6170 -121 1786 110 0 30 chr2 117929425 117929688 -135326895 + AluSx SINE Alu 14 268 -44 212 318 78 32 chr2 117929866 117930020 -135326563 + L2 LINE L2 2768 2928 -386 291 254 15 0 chr2 117930230 117930297 -135326286 + L2 LINE L2 3246 3313 0 371 266 124 40 chr2 117930492 117930669 -135325914 + L1ME LINE L1 5471 5662 -459 285 299 51 26 chr2 117930716 117930833 -135325750 - MLT1J LTR MaLR -389 122 3 614 261 22 0 chr2 117930880 117931018 -135325565 + MLT1J LTR MaLR 40 180 -331 1763 162 0 53 chr2 117931023 117931344 -135325239 + AluJo SINE Alu 1 304 -8 2402 77 3 3 chr2 117931767 117932066 -135324517 - AluSq SINE Alu -14 299 1 192 77 0 0 chr2 117932074 117932100 -135324483 + (T)n Simple_repeat Simple_repeat 1 26 0 917 163 77 34 chr2 117932389 117932598 -135323985 + L1MB7 LINE L1 5951 6168 -16 2097 122 0 3 chr2 117932739 117933035 -135323548 - AluSx SINE Alu -16 296 2 888 238 65 16 chr2 117933037 117933285 -135323298 - L1ME1 LINE L1 -96 6070 5811 1977 107 4 4 chr2 117933285 117933556 -135323027 + AluSx SINE Alu 1 271 -41 1489 81 0 0 chr2 117933689 117933874 -135322709 - AluSg SINE Alu -125 185 1 204 243 0 0 chr2 117934117 117934191 -135322392 + (TA)n Simple_repeat Simple_repeat 2 75 0 25 0 0 0 chr2 117934354 117934379 -135322204 + AT_rich Low_complexity Low_complexity 1 25 0 237 167 0 0 chr2 117934661 117934709 -135321874 + L1MB5 LINE L1 6127 6174 0 1198 108 0 0 chr2 117934760 117934926 -135321657 + AluSg/x SINE Alu 133 298 -14 4574 176 55 8 chr2 117934927 117936387 -135320196 - L1MB3 LINE L1 0 6183 4663 248 136 0 0 chr2 117936506 117936556 -135320027 - Alu SINE Alu -255 47 12 183 139 0 0 chr2 117936639 117936675 -135319908 + (TG)n Simple_repeat Simple_repeat 2 37 0 256 236 27 45 chr2 117937287 117937397 -135319186 - MIR SINE MIR -55 207 100 2271 112 0 7 chr2 117937398 117937703 -135318880 + AluSg SINE Alu 1 303 -7 2144 93 0 55 chr2 117937810 117938121 -135318462 + AluSq SINE Alu 1 294 -19 273 57 0 0 chr2 117938121 117938156 -135318427 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 312 27 0 0 chr2 117938183 117938220 -135318363 + (TG)n Simple_repeat Simple_repeat 2 38 0 534 221 0 73 chr2 117938224 117938331 -135318252 + L2 LINE L2 3188 3285 -28 1783 150 22 29 chr2 117938331 117938645 -135317938 - AluJo SINE Alu 0 312 1 534 221 0 73 chr2 117938645 117938673 -135317910 + L2 LINE L2 3285 3313 0 288 206 63 0 chr2 117939115 117939178 -135317405 + L2 LINE L2 3246 3312 -1 183 328 148 27 chr2 117939485 117939668 -135316915 + L2 LINE L2 2866 3070 -202 887 284 94 23 chr2 117939860 117940359 -135316224 + L2 LINE L2 2501 3073 -240 2009 124 3 3 chr2 117940366 117940672 -135315911 + AluSx SINE Alu 1 306 0 2247 90 0 23 chr2 117940778 117941079 -135315504 + AluSq SINE Alu 1 294 -19 273 57 0 0 chr2 117941079 117941114 -135315469 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 492 18 0 0 chr2 117941141 117941198 -135315385 + (TG)n Simple_repeat Simple_repeat 2 58 0 547 213 0 73 chr2 117941202 117941309 -135315274 + L2 LINE L2 3188 3285 -28 1783 150 22 29 chr2 117941309 117941623 -135314960 - AluJo SINE Alu 0 312 1 547 213 0 73 chr2 117941623 117941651 -135314932 + L2 LINE L2 3285 3313 0 288 206 63 0 chr2 117942093 117942156 -135314427 + L2 LINE L2 3246 3312 -1 199 322 148 27 chr2 117942463 117942646 -135313937 + L2 LINE L2 2866 3070 -202 445 184 14 161 chr2 117943316 117943539 -135313044 + L1MC5 LINE L1 6794 6983 -978 6556 34 0 4 chr2 117943572 117944309 -135312274 - L1PA5 LINE L1 -7 6147 5414 2008 150 0 10 chr2 117944360 117944667 -135311916 - AluSx SINE Alu -8 304 1 1890 150 0 29 chr2 117944839 117945203 -135311380 - AluSx SINE Alu 0 356 2 2329 207 82 26 chr2 117945247 117945870 -135310713 - MER76 LTR ERV -30 658 1 265 295 32 21 chr2 117945870 117945965 -135310618 + MLT1H LTR MaLR 82 177 -372 1329 174 64 86 chr2 117946048 117946289 -135310294 + L1MC5 LINE L1 7166 7411 -550 1611 148 83 18 chr2 117946289 117946566 -135310017 + AluSx SINE Alu 5 299 -13 1329 174 64 86 chr2 117946566 117946684 -135309899 + L1MC5 LINE L1 7411 7517 -444 1942 155 0 3 chr2 117946684 117946974 -135309609 + AluSx SINE Alu 1 289 -23 1329 174 64 86 chr2 117946974 117947033 -135309550 + L1MC5 LINE L1 7517 7576 -385 735 210 0 8 chr2 117947071 117947195 -135309388 + FLAM_C SINE Alu 1 123 -20 907 166 61 64 chr2 117947234 117947307 -135309276 + L1MC5 LINE L1 7613 7685 -276 2112 255 94 8 chr2 117947307 117947817 -135308766 - MLT1H1 LTR MaLR 0 555 2 907 166 61 64 chr2 117947817 117948056 -135308527 + L1MC5 LINE L1 7685 7924 -37 1973 134 0 38 chr2 117948066 117948386 -135308197 + AluSc SINE Alu 1 308 -1 237 271 0 139 chr2 117949455 117949503 -135307080 + MIR SINE MIR 76 98 -164 2166 129 0 0 chr2 117949503 117949813 -135306770 - AluSx SINE Alu -2 310 1 237 271 0 139 chr2 117949813 117949886 -135306697 + MIR SINE MIR 98 180 -82 2120 92 34 7 chr2 117950117 117950409 -135306174 + AluSx SINE Alu 1 300 -12 1060 122 0 0 chr2 117950450 117950598 -135305985 - AluSg/x SINE Alu -10 302 155 193 306 28 56 chr2 117950719 117950791 -135305792 - MIR SINE MIR -95 113 44 31 26 0 0 chr2 117951270 117951308 -135305275 + AT_rich Low_complexity Low_complexity 1 38 0 649 266 46 46 chr2 117951322 117951710 -135304873 - L1ME4a LINE L1 -30 6091 5703 2189 111 7 0 chr2 117951710 117952007 -135304576 + AluSq SINE Alu 1 299 -14 349 273 9 133 chr2 117952094 117952416 -135304167 - HAL1 LINE L1 -5 2502 2221 2154 138 0 0 chr2 117952979 117953275 -135303308 + AluSx SINE Alu 1 296 -16 23 0 0 0 chr2 117953289 117953312 -135303271 + AT_rich Low_complexity Low_complexity 1 23 0 421 186 13 98 chr2 117953554 117953708 -135302875 - MLT1H LTR MaLR -369 180 1 339 326 15 8 chr2 117954015 117954147 -135302436 - MLT1H LTR MaLR -246 303 171 504 85 264 78 chr2 117954156 117954285 -135302298 - MER53 DNA DNA 0 189 37 838 242 10 91 chr2 117954315 117954411 -135302172 - MER21B LTR ERV1 -52 811 709 2176 116 3 0 chr2 117954411 117954713 -135301870 - AluSq SINE Alu -10 303 1 838 242 10 91 chr2 117954713 117954914 -135301669 - MER21B LTR ERV1 -154 709 538 1784 171 16 50 chr2 117954931 117955310 -135301273 + LTR8A LTR ERV1 34 399 -328 2183 93 4 4 chr2 117955340 117955620 -135300963 - AluSc SINE Alu -29 280 1 868 185 19 6 chr2 117955620 117955782 -135300801 - FRAM SINE Alu -12 164 1 2199 95 0 3 chr2 117957122 117957407 -135299176 + AluSx SINE Alu 1 284 -28 387 0 0 0 chr2 117957426 117957469 -135299114 + (CA)n Simple_repeat Simple_repeat 2 44 0 474 256 16 8 chr2 117957469 117957584 -135298999 - MIR SINE MIR -132 130 15 649 268 43 43 chr2 117959011 117959246 -135297337 - MIR SINE MIR 0 262 28 2164 131 3 0 chr2 117959742 117960047 -135296536 + AluSx SINE Alu 1 306 -6 453 268 9 9 chr2 117960204 117960316 -135296267 + L2 LINE L2 3202 3313 0 240 265 15 0 chr2 117960488 117960556 -135296027 + L1 LINE L1 4764 4832 -1314 204 111 0 0 chr2 117960564 117960600 -135295983 + (CA)n Simple_repeat Simple_repeat 2 37 0 1938 152 0 10 chr2 117960758 117961060 -135295523 + AluSx SINE Alu 1 299 -13 467 175 76 99 chr2 117961067 117961178 -135295405 + L1MC5 LINE L1 7410 7517 -444 1942 155 0 3 chr2 117961178 117961468 -135295115 + AluSx SINE Alu 1 289 -23 467 175 76 99 chr2 117961468 117961527 -135295056 + L1MC5 LINE L1 7517 7576 -385 735 210 0 8 chr2 117961565 117961689 -135294894 + FLAM_C SINE Alu 1 123 -20 907 166 61 64 chr2 117961728 117961801 -135294782 + L1MC5 LINE L1 7613 7685 -276 2095 257 94 8 chr2 117961801 117962311 -135294272 - MLT1H1 LTR MaLR 0 555 2 907 166 61 64 chr2 117962311 117962550 -135294033 + L1MC5 LINE L1 7685 7924 -37 1973 125 0 37 chr2 117962560 117962857 -135293726 + AluSc SINE Alu 1 286 -23 449 292 162 7 chr2 117963097 117963251 -135293332 + HAL1 LINE L1 1662 1839 -668 757 235 195 53 chr2 117963266 117963661 -135292922 - MLT1H LTR MaLR 0 549 99 720 200 0 24 chr2 117963731 117963856 -135292727 - FLAM_C SINE Alu -12 131 10 238 228 0 18 chr2 117963889 117963946 -135292637 + L2 LINE L2 3161 3216 -97 621 192 0 0 chr2 117964261 117964365 -135292218 - U13 snRNA snRNA 0 104 1 229 230 115 11 chr2 117964433 117964520 -135292063 + Charlie7 DNA MER1_type 2508 2603 -9 309 233 158 75 chr2 117964534 117964654 -135291929 + Charlie8 DNA MER1_type 6 135 -2282 2279 67 0 3 chr2 117964656 117964971 -135291612 - AluY SINE Alu 0 314 1 212 353 15 0 chr2 117965006 117965074 -135291509 + L2 LINE L2 3001 3069 -203 353 188 0 0 chr2 117965099 117965163 -135291420 + Tigger2 DNA MER2_type 10 73 -2645 579 187 25 153 chr2 117965196 117965399 -135291184 - MER8 DNA MER2_type -62 177 1 214 263 0 71 chr2 117965466 117965565 -135291018 + MIR SINE MIR 114 205 -57 2245 82 7 0 chr2 117965568 117965884 -135290699 + AluY SINE Alu 1 318 0 211 346 29 0 chr2 117966222 117966326 -135290257 + L2 LINE L2 794 900 -2414 981 209 0 0 chr2 117967037 117967214 -135289369 + AluJo SINE Alu 121 297 -15 2089 158 0 0 chr2 117967263 117967574 -135289009 - AluSx SINE Alu -1 311 1 207 0 0 0 chr2 117967616 117967639 -135288944 + (TG)n Simple_repeat Simple_repeat 2 24 0 2095 103 0 39 chr2 117967767 117968078 -135288505 + AluSp SINE Alu 1 299 -14 245 339 113 0 chr2 117968134 117968249 -135288334 - L2 LINE L2 -633 2681 2554 502 282 43 16 chr2 117968336 117968524 -135288059 + MIR SINE MIR 68 260 -2 2195 101 10 10 chr2 117969332 117969638 -135286945 - AluSx SINE Alu -6 306 1 2676 262 65 54 chr2 117969867 117970925 -135285658 + HAL1 LINE L1 11 1085 -1422 1640 197 3 3 chr2 117970925 117971224 -135285359 - AluJo SINE Alu -1 311 13 2676 262 65 54 chr2 117971224 117971355 -135285228 + HAL1 LINE L1 1085 1213 -1294 2136 134 23 29 chr2 117971365 117971716 -135284867 + THE1B LTR MaLR 14 362 -2 451 152 19 57 chr2 117971800 117971905 -135284678 + HAL1 LINE L1 1388 1488 -1019 780 200 7 0 chr2 117972912 117973067 -135283516 + L1M3 LINE L1 5334 5489 -691 252 180 0 66 chr2 117973077 117973138 -135283445 - MER81 DNA DNA -55 59 3 21 0 0 0 chr2 117973491 117973512 -135283071 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 117973675 117973698 -135282885 + AT_rich Low_complexity Low_complexity 1 23 0 1015 174 67 0 chr2 117973921 117974099 -135282484 + AluJo SINE Alu 87 276 -36 988 55 7 14 chr2 117974576 117974721 -135281862 + (TCTA)n Simple_repeat Simple_repeat 3 146 0 1962 140 0 0 chr2 117975245 117975517 -135281066 - AluSx SINE Alu -40 272 1 438 212 13 1 chr2 117976201 117976297 -135280286 - MLT1I LTR MaLR -28 420 296 2301 102 3 0 chr2 117976336 117976639 -135279944 - AluSx SINE Alu -8 304 1 269 253 36 12 chr2 117977526 117977609 -135278974 + LTR33A LTR ERVL 45 129 -394 28 0 0 0 chr2 117977811 117977839 -135278744 + AT_rich Low_complexity Low_complexity 1 28 0 2262 97 0 3 chr2 117977839 117978129 -135278454 - AluSq SINE Alu -24 289 1 2918 181 39 13 chr2 117978314 117978856 -135277727 - MER21A LTR ERV1 0 931 376 1351 164 43 12 chr2 117978861 117979100 -135277483 - MER21A LTR ERV1 -667 264 15 441 0 0 0 chr2 117979100 117979149 -135277434 + (TG)n Simple_repeat Simple_repeat 2 50 0 1351 164 43 12 chr2 117979149 117979165 -135277418 - MER21A LTR ERV1 -916 15 1 1334 157 43 70 chr2 117979707 117980007 -135276576 + AluJb SINE Alu 4 295 -17 741 234 41 6 chr2 117980272 117980443 -135276140 + MER69A DNA AcHobo 1 177 0 355 262 18 73 chr2 117980553 117980717 -135275866 + MIR SINE MIR 2 156 -106 1005 193 115 8 chr2 117980723 117980966 -135275617 + ORSL DNA AcHobo 7 275 0 340 287 21 70 chr2 117981312 117981455 -135275128 - MER5B DNA MER1_type -41 137 2 389 307 16 79 chr2 117981982 117982113 -135274470 + L1M4 LINE L1 2269 2378 -3768 2231 89 48 0 chr2 117982113 117982406 -135274177 + AluY SINE Alu 1 307 -4 389 307 16 79 chr2 117982406 117982528 -135274055 + L1M4 LINE L1 2378 2506 -3640 200 235 148 25 chr2 117982769 117982850 -135273733 - L3 LINE CR1 -176 1401 1311 797 144 104 12 chr2 117982855 117983028 -135273555 + MER5A DNA MER1_type 1 189 0 1100 220 78 123 chr2 117983510 117983597 -135272986 + MLT1E3 LTR MaLR 165 254 -370 1911 158 3 10 chr2 117983597 117983907 -135272676 + AluJo SINE Alu 1 308 -4 1100 220 78 123 chr2 117983907 117984089 -135272494 + MLT1E3 LTR MaLR 254 373 -251 1806 169 76 14 chr2 117984089 117984433 -135272150 - MLT1A1 LTR MaLR 0 365 1 1100 220 78 123 chr2 117984433 117984672 -135271911 + MLT1E3 LTR MaLR 373 621 -3 605 236 0 24 chr2 117985952 117986079 -135270504 - FLAM_A SINE Alu -8 125 2 406 143 13 39 chr2 117986115 117986192 -135270391 + MLT1A2 LTR MaLR 1 75 -315 583 218 90 46 chr2 117986222 117986493 -135270090 + MLT1A1 LTR MaLR 1 269 -157 * 707 126 39 204 chr2 117986481 117986711 -135269872 + MLT1A2 LTR MaLR 183 374 0 * 1643 171 30 7 chr2 117986711 117987005 -135269578 + MLT1B LTR MaLR 88 388 -2 2264 88 25 0 chr2 117987627 117987912 -135268671 + AluSg SINE Alu 1 292 -18 459 117 0 104 chr2 117987973 117988050 -135268533 + AluS SINE Alu 2 70 -248 278 243 301 0 chr2 117988079 117988182 -135268401 - L2 LINE L2 0 3313 3180 1596 136 101 12 chr2 117989173 117989453 -135267130 + AluSx SINE Alu 13 315 0 286 244 58 64 chr2 117989453 117989609 -135266974 + MIR SINE MIR 100 254 -8 822 324 66 22 chr2 117990168 117990622 -135265961 - L2 LINE L2 -524 2790 2317 340 279 116 23 chr2 117990671 117990843 -135265740 + MIR SINE MIR 2 189 -73 1920 149 87 55 chr2 117991022 117991424 -135265159 - MLT1D LTR MaLR 0 505 91 2555 142 56 7 chr2 117991445 117991853 -135264730 - MSTA LTR MaLR 0 428 1 261 305 12 0 chr2 117991867 117991949 -135264634 + L2 LINE L2 2260 2342 -972 304 292 53 0 chr2 117992183 117992296 -135264287 + L2 LINE L2 3184 3302 -11 2090 127 0 20 chr2 117992326 117992625 -135263958 + AluSx SINE Alu 11 303 -9 626 262 46 34 chr2 117992649 117992886 -135263697 - L1ME4a LINE L1 -296 5825 5586 1661 242 56 56 chr2 117993048 117993480 -135263103 + MER21B LTR ERV1 1 435 -428 5055 139 3 7 chr2 117993480 117994205 -135262378 - MER72 LTR ERV1 0 722 1 1661 242 56 56 chr2 117994205 117994309 -135262274 + MER21B LTR ERV1 434 537 -326 368 254 119 0 chr2 117994363 117994497 -135262086 - LTR8A LTR ERV1 -98 629 480 2334 109 0 0 chr2 117994554 117994858 -135261725 + AluSx SINE Alu 2 305 -7 1898 169 72 0 chr2 117994944 117995276 -135261307 + MER46B DNA MER2_type 4 234 -2 2177 107 3 0 chr2 117995340 117995631 -135260952 + AluSx SINE Alu 1 292 -20 1633 184 13 38 chr2 117995640 117995956 -135260627 - MLT1A1 LTR MaLR -56 309 2 1255 245 96 26 chr2 117995958 117996374 -135260209 + MARNA DNA Mariner 127 571 -15 248 263 60 11 chr2 117996436 117996563 -135260020 - MIR SINE MIR -73 189 17 2381 61 0 45 chr2 117996934 117997246 -135259337 + AluY SINE Alu 1 298 -13 1671 181 135 11 chr2 117997990 117998339 -135258244 - MSTD LTR MaLR 0 396 5 525 231 128 31 chr2 117998353 117998548 -135258035 + MER102a DNA MER1_type 114 327 -3 386 156 13 115 chr2 117999102 117999223 -135257360 + MLT1H LTR MaLR 34 171 -378 855 200 0 51 chr2 117999254 117999429 -135257154 + MER63A DNA MER1_type 44 209 -1 320 229 183 53 chr2 117999595 117999726 -135256857 + MLT1H1 LTR MaLR 378 525 -30 2214 106 3 10 chr2 117999726 118000028 -135256555 - AluSg SINE Alu -10 300 1 427 279 127 30 chr2 118000060 118000327 -135256256 - L1ME4a LINE L1 -531 5590 5281 1036 194 20 63 chr2 118000824 118001076 -135255507 + L1MD3 LINE L1 7750 7990 -5 2020 91 3 62 chr2 118001341 118001648 -135254935 - AluSx SINE Alu -23 289 1 273 245 58 65 chr2 118002637 118002792 -135253791 - MIR SINE MIR -9 253 100 189 0 0 0 chr2 118002792 118002813 -135253770 + (TTC)n Simple_repeat Simple_repeat 2 22 0 1595 136 101 12 chr2 118002815 118003072 -135253511 - AluSx SINE Alu -20 292 13 278 243 301 0 chr2 118004062 118004165 -135252418 + L2 LINE L2 3180 3313 0 459 117 0 104 chr2 118004194 118004271 -135252312 - AluS SINE Alu -248 70 2 2241 96 3 0 chr2 118004332 118004625 -135251958 - AluSx SINE Alu -18 294 1 1660 216 8 55 chr2 118004836 118005137 -135251446 + L1M4 LINE L1 4902 5175 -971 2337 91 7 7 chr2 118005137 118005444 -135251139 + AluSp SINE Alu 1 307 -6 1660 216 8 55 chr2 118005444 118005614 -135250969 + L1M4 LINE L1 5175 5351 -795 413 157 0 12 chr2 118005635 118005718 -135250865 + GA-rich Low_complexity Low_complexity 2 83 0 285 291 142 39 chr2 118005862 118005989 -135250594 - MIR3 SINE MIR -25 183 44 31 26 0 0 chr2 118006468 118006506 -135250077 + AT_rich Low_complexity Low_complexity 1 38 0 936 267 31 80 chr2 118006520 118006909 -135249674 - L1ME4a LINE L1 -30 6091 5739 2205 123 0 0 chr2 118006909 118007218 -135249365 + AluSg SINE Alu 1 309 -1 936 267 31 80 chr2 118007218 118007413 -135249170 - L1ME4a LINE L1 -382 5739 5536 2366 100 0 0 chr2 118007427 118007727 -135248856 + AluSg SINE Alu 1 300 -10 245 194 0 15 chr2 118007727 118007794 -135248789 + (TG)n Simple_repeat Simple_repeat 2 67 0 580 287 37 18 chr2 118007837 118008001 -135248582 - MLT1J2 LTR MaLR -8 442 276 434 162 72 10 chr2 118008073 118008180 -135248403 - MLT1J2 LTR MaLR -300 147 38 1939 149 114 63 chr2 118008582 118009012 -135247571 - LTR47A LTR ERVL 0 452 1 1981 81 12 0 chr2 118009209 118009457 -135247126 + AluSp SINE Alu 1 251 -62 774 268 114 58 chr2 118010241 118010618 -135245965 - LTR16A LTR ERVL -1 449 52 1043 93 0 39 chr2 118010998 118011217 -135245366 + (TTTC)n Simple_repeat Simple_repeat 1 390 0 2295 124 0 0 chr2 118011909 118012216 -135244367 + AluSx SINE Alu 1 307 -5 194 0 39 0 chr2 118012216 118012242 -135244341 + (TA)n Simple_repeat Simple_repeat 1 27 0 1836 160 3 32 chr2 118012664 118012884 -135243699 - AluJo SINE Alu -8 304 94 2312 199 50 21 chr2 118012884 118013362 -135243221 + LTR22B LTR ERVK 1 492 0 1836 160 3 32 chr2 118013362 118013454 -135243129 - AluJo SINE Alu -218 94 1 806 161 0 0 chr2 118013464 118013588 -135242995 - FLAM_C SINE Alu -17 126 3 2242 94 0 7 chr2 118014173 118014472 -135242111 - AluSx SINE Alu -15 297 1 2469 97 0 0 chr2 118014786 118015096 -135241487 + AluSx SINE Alu 1 310 -2 365 89 0 9 chr2 118016494 118016707 -135239876 + AluSp SINE Alu 1 302 -1 257 362 107 5 chr2 118017019 118017138 -135239445 + MIR SINE MIR 34 139 -123 444 152 13 0 chr2 118017138 118017217 -135239366 - MER116 DNA Mariner 0 80 1 257 362 107 5 chr2 118017217 118017293 -135239290 + MIR SINE MIR 139 249 -13 182 170 0 21 chr2 118017480 118017527 -135239056 + CT-rich Low_complexity Low_complexity 3 48 0 1999 144 0 0 chr2 118017545 118017829 -135238754 + AluSx SINE Alu 1 284 -28 189 0 0 0 chr2 118017833 118017854 -135238729 + (TAA)n Simple_repeat Simple_repeat 2 22 0 276 77 0 0 chr2 118018037 118018076 -135238507 + (TG)n Simple_repeat Simple_repeat 2 40 0 221 343 10 10 chr2 118018080 118018179 -135238404 - MIR3 SINE MIR -51 157 59 24 0 0 0 chr2 118018277 118018301 -135238282 + AT_rich Low_complexity Low_complexity 1 24 0 3569 210 17 3 chr2 118018333 118018976 -135237607 - MER82 DNA MER2_type 0 653 2 1555 193 32 3 chr2 118019327 118019612 -135236971 - AluJb SINE Alu -17 295 3 2314 169 28 37 chr2 118020068 118020530 -135236053 + MLT1C LTR MaLR 2 459 -8 2354 69 0 10 chr2 118020800 118021124 -135235459 - AluY SINE Alu 0 321 1 434 246 49 28 chr2 118021655 118021797 -135234786 - LTR33A LTR ERVL -41 482 338 289 143 10 184 chr2 118021976 118022074 -135234509 - LTR33A LTR ERVL -442 81 1 868 185 19 6 chr2 118022565 118022727 -135233856 + FRAM SINE Alu 1 164 -12 2272 88 31 0 chr2 118022727 118023021 -135233562 + AluSc SINE Alu 1 303 -6 2249 122 0 3 chr2 118023402 118023713 -135232870 - AluSp SINE Alu -3 310 1 209 274 132 19 chr2 118024110 118024216 -135232367 - L2 LINE L2 0 3313 3196 1946 133 10 19 chr2 118024243 118024552 -135232031 + AluSx SINE Alu 1 306 -6 2291 82 7 7 chr2 118025058 118025351 -135231232 - AluSx SINE Alu -19 293 1 237 265 0 0 chr2 118025415 118025464 -135231119 + MER5B DNA MER1_type 1 49 -129 640 193 34 0 chr2 118025466 118025585 -135230998 - FLAM_A SINE Alu -19 123 1 294 288 180 18 chr2 118025585 118025696 -135230887 - MER5A DNA MER1_type -37 152 24 880 256 63 51 chr2 118026824 118027219 -135229364 + MLT1K LTR MaLR 187 586 -2 284 269 51 13 chr2 118027340 118027418 -135229165 + MIR SINE MIR 71 151 -57 2270 109 0 7 chr2 118028079 118028383 -135228200 + AluSg SINE Alu 4 305 -5 663 281 271 16 chr2 118028552 118029057 -135227526 - L2 LINE L2 -1324 1990 1357 540 152 22 0 chr2 118029071 118029163 -135227420 + AluSc SINE Alu 190 283 -26 2199 91 14 0 chr2 118029418 118029714 -135226869 + AluSp SINE Alu 1 300 -13 820 145 0 0 chr2 118029953 118030070 -135226513 - FLAM_C SINE Alu -26 117 1 400 109 0 0 chr2 118030122 118030186 -135226397 - L1MA9 LINE L1 -86 6226 6163 1292 187 4 4 chr2 118030186 118030421 -135226162 - AluJb SINE Alu -77 235 1 2315 96 6 6 chr2 118030472 118030784 -135225799 - AluSx SINE Alu 0 312 1 237 265 0 0 chr2 118030848 118030897 -135225686 + MER5B DNA MER1_type 1 49 -129 640 193 34 0 chr2 118030899 118031018 -135225565 - FLAM_A SINE Alu -19 123 1 294 288 180 18 chr2 118031018 118031129 -135225454 - MER5A DNA MER1_type -37 152 24 880 256 63 51 chr2 118032257 118032652 -135223931 + MLT1K LTR MaLR 187 586 -2 284 269 51 13 chr2 118032773 118032851 -135223732 + MIR SINE MIR 71 151 -57 2150 128 0 7 chr2 118033512 118033816 -135222767 + AluSg SINE Alu 4 305 -5 2114 101 0 0 chr2 118033915 118034182 -135222401 - AluSg SINE Alu -13 297 31 224 278 0 0 chr2 118034182 118034236 -135222347 + CT-rich Low_complexity Low_complexity 2 55 0 1038 258 39 85 chr2 118034559 118034721 -135221862 - MLT1J LTR MaLR -2 509 341 2476 58 0 10 chr2 118034721 118035029 -135221554 - AluY SINE Alu -6 305 1 1038 258 39 85 chr2 118035029 118035215 -135221368 - MLT1J LTR MaLR -170 341 188 1733 162 0 57 chr2 118035215 118035530 -135221053 - AluJb SINE Alu -15 297 1 1038 258 39 85 chr2 118035530 118035673 -135220910 - MLT1J LTR MaLR -323 188 40 240 299 51 26 chr2 118035720 118035837 -135220746 + MLT1J LTR MaLR 3 122 -389 330 298 73 7 chr2 118035885 118036107 -135220476 - L1MC/D LINE L1 -484 5637 5421 427 317 165 10 chr2 118036256 118036687 -135219896 - L2 LINE L2 0 3272 2768 2406 98 0 0 chr2 118036942 118037247 -135219336 + AluSx SINE Alu 1 305 -7 1734 169 72 0 chr2 118037333 118037665 -135218918 + MER46B DNA MER2_type 4 234 -2 2171 107 3 0 chr2 118037729 118038020 -135218563 + AluSx SINE Alu 1 292 -20 1496 184 13 38 chr2 118038029 118038345 -135218238 - MLT1A1 LTR MaLR -56 309 2 1082 249 37 16 chr2 118038377 118038698 -135217885 + MARNA DNA Mariner 172 499 -87 275 266 95 59 chr2 118038594 118038763 -135217820 - MARNA DNA Mariner -396 190 16 * 253 263 60 11 chr2 118038825 118038952 -135217631 - MIR SINE MIR -73 189 17 2367 61 0 45 chr2 118039323 118039635 -135216948 + AluY SINE Alu 1 298 -13 1511 181 135 11 chr2 118040378 118040727 -135215856 - MSTD LTR MaLR 0 396 5 475 253 119 16 chr2 118040741 118040935 -135215648 + MER102b DNA MER1_type 125 338 -3 535 320 144 39 chr2 118041606 118042071 -135214512 + L2 LINE L2 2764 3272 0 688 196 30 15 chr2 118042256 118042389 -135214194 + MER5A DNA MER1_type 48 182 -7 662 152 0 83 chr2 118042410 118042555 -135214028 - FLAM_C SINE Alu 0 133 1 233 273 10 30 chr2 118043311 118043410 -135213173 + G-rich Low_complexity Low_complexity 3 99 0 21 0 0 0 chr2 118043855 118043876 -135212707 + GC_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr2 118044955 118044984 -135211599 + AT_rich Low_complexity Low_complexity 1 29 0 2209 93 0 0 chr2 118046613 118046931 -135209652 - AluSc SINE Alu 0 318 1 2173 109 7 13 chr2 118047429 118047731 -135208852 - AluSq SINE Alu -13 300 1 196 399 43 14 chr2 118048094 118048232 -135208351 - MIR3 SINE MIR -62 146 5 615 250 104 17 chr2 118048512 118048711 -135207872 - MIR SINE MIR 0 262 43 217 200 60 0 chr2 118048734 118048784 -135207799 + L2 LINE L2 3261 3313 0 279 239 88 44 chr2 118048804 118048917 -135207666 + MER5B DNA MER1_type 44 161 -17 195 278 102 37 chr2 118048833 118048941 -135207642 - MER5A DNA MER1_type -68 121 7 * 489 283 142 14 chr2 118049065 118049202 -135207381 + MIR SINE MIR 23 141 -121 1671 181 17 7 chr2 118049202 118049495 -135207088 - AluJo SINE Alu -12 300 5 204 40 0 0 chr2 118049496 118049521 -135207062 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 489 283 142 14 chr2 118049521 118049593 -135206990 + MIR SINE MIR 140 261 -1 1918 122 0 0 chr2 118050858 118051121 -135205462 - AluSx SINE Alu -5 307 45 323 221 63 21 chr2 118051636 118051731 -135204852 - MIR3 SINE MIR -12 196 98 229 270 0 87 chr2 118052130 118052245 -135204338 - MIR SINE MIR -30 232 128 264 317 39 0 chr2 118053032 118053136 -135203447 + L2 LINE L2 3191 3298 -15 596 159 26 0 chr2 118053413 118053526 -135203057 - L1MB7 LINE L1 -11 6173 6058 1070 141 22 0 chr2 118053567 118053751 -135202832 - L1MB7 LINE L1 -120 6064 5877 197 320 205 6 chr2 118053944 118054100 -135202483 - MIR SINE MIR -64 198 12 1636 71 9 36 chr2 118054376 118054600 -135201983 + AluSp SINE Alu 1 218 -95 711 124 0 0 chr2 118054601 118054698 -135201885 + AluSp/q SINE Alu 188 284 -29 726 111 48 8 chr2 118055076 118055202 -135201381 - Tigger1 DNA MER2_type -1206 1212 1082 2169 114 3 0 chr2 118055938 118056237 -135200346 - AluSx SINE Alu -12 300 1 1138 209 59 12 chr2 118056237 118056558 -135200025 - L1MA9 LINE L1 -58 6254 5919 402 231 98 7 chr2 118056561 118056704 -135199879 - L1MDb LINE L1 -4813 2128 1973 1057 160 6 0 chr2 118056704 118056873 -135199710 - AluSg/x SINE Alu -11 301 132 1454 117 168 12 chr2 118056876 118057132 -135199451 - AluSg1 SINE Alu -13 296 1 413 273 68 52 chr2 118057133 118057200 -135199383 - L1MDb LINE L1 -4954 1954 1890 2190 101 0 13 chr2 118057200 118057498 -135199085 - AluY SINE Alu -17 294 1 413 273 68 52 chr2 118057498 118057644 -135198939 - L1MDb LINE L1 -5018 1890 1698 269 308 8 0 chr2 118057664 118057797 -135198786 - L1MDb LINE L1 -4968 1455 1322 638 229 106 33 chr2 118057800 118058045 -135198538 - L1ME LINE L1 -375 5791 5529 370 309 147 39 chr2 118058145 118058559 -135198024 - L1ME LINE L1 -747 5399 4941 1930 100 0 0 chr2 118058568 118058818 -135197765 + AluSg SINE Alu 46 295 -15 4349 173 50 6 chr2 118058840 118060371 -135196212 - L1MB3 LINE L1 -29 6154 4564 21 36 0 0 chr2 118060592 118060620 -135195963 + AT_rich Low_complexity Low_complexity 1 28 0 1307 196 74 4 chr2 118060620 118060890 -135195693 - AluJo SINE Alu -23 289 1 2288 103 3 6 chr2 118061028 118061340 -135195243 + AluSp SINE Alu 1 311 -2 28 48 0 0 chr2 118061793 118061835 -135194748 + AT_rich Low_complexity Low_complexity 1 42 0 255 200 50 38 chr2 118062509 118062589 -135193994 + L1ME LINE L1 5760 5840 -281 3940 188 66 1 chr2 118063294 118064065 -135192518 + MER21B LTR ERV1 3 823 -40 1803 133 4 0 chr2 118064757 118065013 -135191570 - AluSx SINE Alu -12 300 44 2123 111 3 19 chr2 118065070 118065377 -135191206 - AluSg SINE Alu -8 302 1 928 147 0 0 chr2 118065377 118065513 -135191070 - AluSq/x SINE Alu -177 136 1 829 267 64 19 chr2 118066002 118066362 -135190221 - L1MC4a LINE L1 -1857 5951 5576 735 290 116 36 chr2 118067225 118067668 -135188915 + Tigger8 DNA MER2_type 14 519 -147 2419 77 0 13 chr2 118067668 118067981 -135188602 + AluSg SINE Alu 1 309 -1 735 290 116 36 chr2 118067981 118068140 -135188443 + Tigger8 DNA MER2_type 519 664 -2 1174 174 70 110 chr2 118068468 118068877 -135187706 - MLT1B LTR MaLR -2 465 1 28 0 0 0 chr2 118069941 118069969 -135186614 + AT_rich Low_complexity Low_complexity 1 28 0 209 250 54 0 chr2 118070721 118070777 -135185806 + CT-rich Low_complexity Low_complexity 2 60 0 302 231 159 39 chr2 118070779 118070961 -135185622 - L1ME3 LINE L1 -2 6160 5957 407 348 96 76 chr2 118071027 118071446 -135185137 - L2 LINE L2 -4 3268 2842 567 316 20 41 chr2 118071563 118071709 -135184874 + MIR SINE MIR 21 162 -100 1921 177 3 6 chr2 118071709 118072020 -135184563 - AluJb SINE Alu 0 312 3 567 316 20 41 chr2 118072020 118072117 -135184466 + MIR SINE MIR 162 259 -3 273 332 24 72 chr2 118072069 118072277 -135184306 - L2 LINE L2 -566 2748 2551 * 898 243 90 66 chr2 118072310 118072912 -135183671 - L1MC5 LINE L1 -48 7913 7298 1657 176 3 33 chr2 118073084 118073253 -135183330 - AluJo SINE Alu -15 297 139 2249 111 3 0 chr2 118073253 118073560 -135183023 - AluSx SINE Alu -4 308 1 1657 176 3 33 chr2 118073560 118073696 -135182887 - AluJo SINE Alu -173 139 1 4878 164 45 18 chr2 118073706 118075013 -135181570 - L1MA5 LINE L1 -6 6294 4948 320 336 250 19 chr2 118075016 118076375 -135180208 - L2 LINE L2 -912 2402 717 2231 78 7 0 chr2 118076656 118076972 -135179611 - AluY SINE Alu 0 318 1 1844 136 0 70 chr2 118077383 118077714 -135178869 - AluJo SINE Alu -4 308 1 261 0 0 0 chr2 118078225 118078254 -135178329 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1969 134 4 0 chr2 118078254 118078529 -135178054 - AluSq SINE Alu -32 281 6 2447 87 0 0 chr2 118078532 118078831 -135177752 - AluSx SINE Alu -11 301 3 201 273 106 30 chr2 118078921 118078987 -135177596 + L2 LINE L2 3200 3270 -2 1973 209 116 37 chr2 118079248 118079757 -135176826 - MER119 DNA MER1_type 0 583 29 1003 218 87 72 chr2 118079757 118080147 -135176436 - MSTD LTR MaLR 0 396 1 1973 209 116 37 chr2 118080147 118080172 -135176411 - MER119 DNA MER1_type -554 29 7 24 53 0 0 chr2 118080620 118080658 -135175925 + AT_rich Low_complexity Low_complexity 1 38 0 690 262 33 65 chr2 118081174 118081541 -135175042 - HAL1 LINE L1 -5 2502 2148 360 303 21 37 chr2 118081565 118081753 -135174830 - L1MC4 LINE L1 -32 8010 7826 728 217 20 14 chr2 118081848 118082089 -135174494 - MER58A DNA MER1_type 0 224 21 2031 231 38 81 chr2 118082113 118082468 -135174115 - L1ME2 LINE L1 -69 6095 5726 1460 172 21 14 chr2 118082468 118082747 -135173836 - AluJb SINE Alu 0 312 32 2031 231 38 81 chr2 118082747 118083025 -135173558 - L1ME2 LINE L1 -438 5726 5438 2039 126 7 7 chr2 118083025 118083310 -135173273 - AluSx SINE Alu -21 291 7 2031 231 38 81 chr2 118083310 118083635 -135172948 - L1ME2 LINE L1 -726 5438 1927 225 243 105 40 chr2 118083710 118083862 -135172721 - L1M4 LINE L1 -979 5167 5006 239 303 11 0 chr2 118084896 118084985 -135171598 + L3 LINE CR1 1193 1282 -295 451 352 107 0 chr2 118085439 118085655 -135170928 + L3 LINE CR1 1283 1521 -56 183 235 20 20 chr2 118086220 118086271 -135170312 + MIR3 SINE MIR 144 194 -14 2192 124 0 0 chr2 118086566 118086865 -135169718 + AluSg1 SINE Alu 1 299 -10 2313 60 0 3 chr2 118087015 118087297 -135169286 - AluY SINE Alu -10 301 21 207 225 0 0 chr2 118087536 118087607 -135168976 + T-rich Low_complexity Low_complexity 1 71 0 1992 168 33 10 chr2 118088538 118088936 -135167647 - L1MB8 LINE L1 -7 6171 5765 384 220 0 10 chr2 118088960 118089060 -135167523 + MER104 DNA Tc2 52 150 -30 233 271 82 24 chr2 118089144 118089229 -135167354 - MIR SINE MIR -156 106 17 1834 155 3 32 chr2 118089353 118089662 -135166921 + AluJb SINE Alu 6 305 -7 4524 250 88 39 chr2 118089678 118089999 -135166584 - L1MEc LINE L1 -4206 2190 1886 1554 156 30 121 chr2 118089999 118090428 -135166155 - MLT1B LTR MaLR 0 390 1 4524 250 88 39 chr2 118090428 118090451 -135166132 - L1MEc LINE L1 -4510 1886 1866 2132 113 0 7 chr2 118090451 118090742 -135165841 - AluSx SINE Alu -23 289 1 4524 250 88 39 chr2 118090742 118092354 -135164229 - L1MEc LINE L1 -4530 1866 125 2617 33 3 0 chr2 118092354 118092658 -135163925 - AluY SINE Alu -6 305 1 4524 250 88 39 chr2 118092658 118092743 -135163840 - L1MEc LINE L1 -6271 125 46 24 0 0 0 chr2 118093715 118093739 -135162844 + AT_rich Low_complexity Low_complexity 1 24 0 29 70 0 0 chr2 118094098 118094155 -135162428 + AT_rich Low_complexity Low_complexity 1 57 0 1583 177 57 3 chr2 118094157 118094440 -135162143 - AluJo SINE Alu -12 300 3 300 343 177 30 chr2 118096319 118097667 -135158916 - L2 LINE L2 -1 3271 1696 1973 58 0 54 chr2 118097845 118098106 -135158477 + AluY SINE Alu 43 289 -22 352 271 154 62 chr2 118098541 118098983 -135157600 - HAL1 LINE L1 -10 2497 2011 4073 111 48 12 chr2 118098983 118099647 -135156936 - L1PA13 LINE L1 -2 6161 5474 352 271 154 62 chr2 118099647 118099658 -135156925 - HAL1 LINE L1 -496 2011 2002 1639 101 58 0 chr2 118099711 118100118 -135156465 - L1PA13 LINE L1 -677 5491 5057 1792 164 3 10 chr2 118100706 118100999 -135155584 + AluJb SINE Alu 1 291 -21 1394 251 84 44 chr2 118101388 118101498 -135155085 - HAL1 LINE L1 -113 2394 2290 1687 177 42 0 chr2 118101498 118101786 -135154797 - AluJb SINE Alu -12 300 1 1394 251 84 44 chr2 118101786 118102305 -135154278 - HAL1 LINE L1 -217 2290 1740 2545 71 0 0 chr2 118102432 118102742 -135153841 + AluSx SINE Alu 1 310 -2 1867 168 0 3 chr2 118102908 118103199 -135153384 - AluJo SINE Alu -22 290 1 631 283 95 54 chr2 118103293 118103318 -135153265 - L1MC/D LINE L1 -2005 5803 5780 2440 212 70 15 chr2 118103318 118103935 -135152648 + MER82 DNA MER2_type 2 652 -1 631 283 95 54 chr2 118103935 118104105 -135152478 - L1MC/D LINE L1 -2028 5780 5618 2114 120 19 45 chr2 118104105 118104479 -135152104 - THE1B LTR MaLR 0 364 1 631 283 95 54 chr2 118104479 118104671 -135151912 - L1MC/D LINE L1 -2190 5618 5399 23 0 0 0 chr2 118105022 118105045 -135151538 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr2 118105682 118105711 -135150872 + AT_rich Low_complexity Low_complexity 1 29 0 224 333 20 10 chr2 118106167 118106266 -135150317 + (CCCA)n Simple_repeat Simple_repeat 1 100 0 1090 171 99 5 chr2 118106610 118106821 -135149762 - MER46A DNA MER2_type 0 236 6 4573 211 99 64 chr2 118107040 118108674 -135147909 - L1MC4 LINE L1 -165 7877 6186 433 289 36 36 chr2 118108674 118108840 -135147743 - L1MC4a LINE L1 -1650 6158 5993 21 26 0 26 chr2 118109063 118109087 -135147496 + AT_rich Low_complexity Low_complexity 1 25 -13 1900 141 3 20 chr2 118109087 118109386 -135147197 - AluSg SINE Alu -16 294 1 21 26 0 26 chr2 118109386 118109400 -135147183 + AT_rich Low_complexity Low_complexity 25 38 0 758 161 0 23 chr2 118109400 118109530 -135147053 - FLAM_C SINE Alu -16 127 1 25 0 0 0 chr2 118109540 118109565 -135147018 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr2 118109707 118109731 -135146852 + AT_rich Low_complexity Low_complexity 1 24 0 268 190 0 17 chr2 118112581 118112639 -135143944 - L1MC4a LINE L1 -1873 5935 5879 243 386 10 10 chr2 118113245 118113346 -135143237 + MIR3 SINE MIR 83 183 -25 324 278 44 22 chr2 118115292 118115382 -135141201 + L2 LINE L2 3181 3272 0 21 36 0 0 chr2 118116429 118116457 -135140126 + AT_rich Low_complexity Low_complexity 1 28 0 236 250 62 0 chr2 118116957 118117005 -135139578 + L2 LINE L2 3217 3267 -5 252 349 66 0 chr2 118117710 118117816 -135138767 - L2 LINE L2 0 3272 3160 200 329 0 41 chr2 118120209 118120282 -135136301 - L2 LINE L2 -5 3267 3198 2052 158 172 3 chr2 118120396 118120912 -135135671 + LTR65 LTR ERV1 1 636 -33 2106 134 13 0 chr2 118121079 118121384 -135135199 - AluSx SINE Alu -3 309 1 433 296 132 0 chr2 118123587 118123739 -135132844 - MIR SINE MIR -16 246 75 552 309 51 17 chr2 118123750 118123986 -135132597 - MLT1L LTR MaLR -16 599 356 1058 276 39 12 chr2 118125236 118125573 -135131010 - L1ME2 LINE L1 -23 6141 5796 180 305 76 9 chr2 118126937 118127042 -135129541 - L2 LINE L2 -2757 557 446 429 200 24 48 chr2 118128534 118128659 -135127924 - MIR3 SINE MIR 0 208 87 508 250 28 21 chr2 118128772 118128916 -135127667 - MIR SINE MIR -113 149 5 1101 276 25 0 chr2 118129657 118129979 -135126604 + LTR16A LTR ERVL 121 450 0 22 0 0 0 chr2 118130269 118130291 -135126292 + AT_rich Low_complexity Low_complexity 1 22 0 186 71 0 0 chr2 118130348 118130376 -135126207 + (TG)n Simple_repeat Simple_repeat 2 29 0 911 138 0 0 chr2 118132117 118132247 -135124336 + AluSg/x SINE Alu 99 228 -84 2084 152 12 111 chr2 118133589 118134018 -135122565 - MER65A LTR ERV1 0 445 70 2373 84 16 7 chr2 118134018 118134327 -135122256 - AluSx SINE Alu 0 312 1 2084 152 12 111 chr2 118134327 118134391 -135122192 - MER65A LTR ERV1 -375 70 1 279 104 0 0 chr2 118134645 118134693 -135121890 + (T)n Simple_repeat Simple_repeat 1 48 0 1086 253 66 43 chr2 118134890 118135002 -135121581 - MLT1I LTR MaLR -6 403 295 776 152 139 0 chr2 118135002 118135167 -135121416 + MER53 DNA DNA 1 188 -1 1086 253 66 43 chr2 118135167 118135446 -135121137 - MLT1I LTR MaLR -114 295 3 217 269 101 82 chr2 118135556 118135775 -135120808 - L3 LINE CR1 -206 1371 1149 1982 238 103 0 chr2 118136097 118136563 -135120020 + MLT1H1 LTR MaLR 1 514 -41 261 238 254 8 chr2 118136899 118137025 -135119558 - MIR SINE MIR -60 202 46 223 217 0 0 chr2 118137081 118137127 -135119456 - MIR SINE MIR -120 142 97 288 340 0 9 chr2 118138455 118138561 -135118022 - MIR3 SINE MIR -3 205 101 242 146 0 0 chr2 118138727 118138768 -135117815 + MER117 DNA MER1_type 42 82 -115 622 274 55 31 chr2 118138788 118139080 -135117503 + L2 LINE L2 3012 3310 -3 276 200 0 0 chr2 118139084 118139134 -135117449 + MER117 DNA MER1_type 115 164 -33 262 333 0 0 chr2 118139347 118139428 -135117155 + L2 LINE L2 3186 3266 -6 1727 186 18 66 chr2 118142237 118142630 -135113953 + MLT1A2 LTR MaLR 1 374 0 2328 80 0 3 chr2 118142664 118142973 -135113610 + AluSq SINE Alu 1 308 0 609 100 0 0 chr2 118143352 118143432 -135113151 + MADE1 DNA Mariner 1 80 0 492 266 101 13 chr2 118143636 118143794 -135112789 - L1ME LINE L1 -352 5769 5598 478 332 90 12 chr2 118144469 118145042 -135111541 - L2 LINE L2 0 3313 2696 399 344 0 0 chr2 118145126 118145283 -135111300 - L2 LINE L2 -1335 1979 1823 1435 257 81 42 chr2 118145312 118146000 -135110583 + HAL1 LINE L1 480 1194 -1313 2519 68 0 7 chr2 118146155 118146463 -135110120 + AluY SINE Alu 1 306 -5 1184 206 29 18 chr2 118146673 118146950 -135109633 - L1MB8 LINE L1 0 6178 5899 1315 176 115 10 chr2 118146950 118147246 -135109337 - MSTC LTR MaLR 0 428 102 408 217 170 0 chr2 118147271 118147377 -135109206 - MSTC LTR MaLR -203 225 102 1041 172 108 0 chr2 118147402 118147605 -135108978 - MSTC LTR MaLR -203 225 1 2158 167 31 31 chr2 118147605 118148055 -135108528 - L1MB8 LINE L1 -281 5903 5454 297 146 0 0 chr2 118148056 118148104 -135108479 - MLT2B3 LTR ERVL -8 512 465 2833 189 24 12 chr2 118148145 118148426 -135108157 - MLT2B3 LTR ERVL -46 508 217 312 48 0 0 chr2 118148426 118148468 -135108115 + (GA)n Simple_repeat Simple_repeat 2 43 0 2833 189 24 12 chr2 118148468 118148688 -135107895 - MLT2B3 LTR ERVL -337 217 1 7521 142 32 12 chr2 118148688 118149010 -135107573 - ERVL-B3 LTR ERVL -7 5757 5443 2154 63 0 0 chr2 118149010 118149278 -135107305 - L1PA5 LINE L1 -8 6146 5879 7521 142 32 12 chr2 118149278 118150163 -135106420 - ERVL-B3 LTR ERVL -321 5443 4526 380 284 112 44 chr2 118150332 118150703 -135105880 - L1M2a LINE L1 -5902 1196 1 * 2377 278 41 14 chr2 118150698 118151495 -135105088 - L1M4b LINE L1 -5878 981 110 402 324 40 12 chr2 118151495 118151668 -135104915 - MLT1J1 LTR MaLR -141 305 128 193 321 214 6 chr2 118151879 118152047 -135104536 - L2 LINE L2 -1480 1834 1632 445 264 85 0 chr2 118154038 118154214 -135102369 + MIR SINE MIR 37 228 -34 1674 174 7 13 chr2 118154740 118155044 -135101539 - AluJb SINE Alu -10 302 1 467 214 0 0 chr2 118155960 118156049 -135100534 - MER5A DNA MER1_type -84 105 17 1955 161 108 20 chr2 118156204 118156400 -135100183 - MSTB1 LTR MaLR 0 432 255 300 70 0 0 chr2 118156400 118156443 -135100140 + (TG)n Simple_repeat Simple_repeat 2 44 0 231 36 0 0 chr2 118156444 118156472 -135100111 + (GA)n Simple_repeat Simple_repeat 2 29 0 1955 161 108 20 chr2 118156472 118156670 -135099913 - MSTB1 LTR MaLR -176 256 1 242 358 157 0 chr2 118156812 118156946 -135099637 - L2 LINE L2 -1 3271 3117 490 166 0 116 chr2 118157019 118157141 -135099442 - MER33 DNA MER1_type -2297 327 231 2180 86 17 36 chr2 118157141 118157442 -135099141 - AluSq SINE Alu -18 295 1 490 166 0 116 chr2 118157442 118157500 -135099083 - MER33 DNA MER1_type -2393 231 168 2247 189 32 0 chr2 118157519 118157921 -135098662 + MSTB LTR MaLR 12 426 0 420 247 0 0 chr2 118157921 118158007 -135098576 - MER33 DNA MER1_type -205 119 34 1053 199 9 5 chr2 118158775 118158991 -135097592 - U3 snRNA snRNA 0 217 1 182 232 71 0 chr2 118158994 118159050 -135097533 - MIR SINE MIR -73 189 130 5009 100 14 11 chr2 118159052 118159773 -135096810 + L1PB1 LINE L1 5428 6150 -1 23 0 0 0 chr2 118159773 118159796 -135096787 + AT_rich Low_complexity Low_complexity 1 23 0 217 318 23 39 chr2 118159799 118159928 -135096655 - MIR SINE MIR -78 130 4 277 296 119 28 chr2 118160455 118160631 -135095952 + MIR SINE MIR 11 202 -60 806 252 93 33 chr2 118161029 118161059 -135095524 - L2 LINE L2 -125 3188 3161 2142 149 9 11 chr2 118161059 118161407 -135095176 + MER7A DNA MER2_type 1 345 -1 806 252 93 33 chr2 118161407 118161958 -135094625 - L2 LINE L2 -152 3161 2562 1432 184 0 60 chr2 118163904 118163999 -135092584 + AluJo SINE Alu 42 141 -171 1858 152 0 20 chr2 118163999 118164295 -135092288 + AluJb SINE Alu 1 290 -22 1432 184 0 60 chr2 118164295 118164482 -135092101 + AluJo SINE Alu 141 307 -5 2060 113 7 14 chr2 118164519 118164812 -135091771 - AluSg SINE Alu -19 291 1 516 309 20 15 chr2 118164818 118165019 -135091564 - MIR SINE MIR -19 243 42 2819 173 72 2 chr2 118165269 118165783 -135090800 - MER44D DNA MER2_type 0 605 1 220 26 0 51 chr2 118166287 118166326 -135090257 + (TTTTA)n Simple_repeat Simple_repeat 4 40 0 44717 42 2 2 chr2 118166326 118172460 -135084123 - L1PA3 LINE L1 -16 6139 3 344 132 0 0 chr2 118172708 118172761 -135083822 - MLT1E1 LTR MaLR -3 651 599 2398 77 0 13 chr2 118172768 118173078 -135083505 + AluY SINE Alu 1 306 -5 265 264 8 72 chr2 118173110 118173235 -135083348 + MIR3 SINE MIR 77 193 -15 2059 131 3 0 chr2 118173549 118173863 -135082720 + AluSx SINE Alu 1 315 0 588 231 61 29 chr2 118173919 118174243 -135082340 + MLT1I LTR MaLR 28 409 0 745 259 104 36 chr2 118175190 118175526 -135081057 - L1MC4a LINE L1 -1831 5977 5619 261 284 12 0 chr2 118175669 118175750 -135080833 - L2 LINE L2 -3 3310 3229 2362 177 38 13 chr2 118175797 118176250 -135080333 + MLT2C2 LTR ERVL 1 464 0 195 42 0 0 chr2 118176513 118176537 -135080046 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 2878 70 3 11 chr2 118176537 118176907 -135079676 - L1PA8 LINE L1 -24 6148 5782 212 265 0 0 chr2 118177772 118177821 -135078762 + CT-rich Low_complexity Low_complexity 1 49 0 1901 195 42 2 chr2 118178019 118178419 -135078164 - L1MB8 LINE L1 -16 6162 5747 339 286 151 8 chr2 118178613 118178739 -135077844 + MIR SINE MIR 17 160 -102 614 271 33 73 chr2 118178742 118179015 -135077568 + MLT1J LTR MaLR 1 262 -249 2349 140 0 11 chr2 118179184 118179307 -135077276 + L1PA13 LINE L1 5814 5937 -226 557 113 0 12 chr2 118179307 118179387 -135077196 - MADE1 DNA Mariner -1 79 1 2349 140 0 11 chr2 118179387 118179613 -135076970 + L1PA13 LINE L1 5937 6159 -4 2318 106 0 0 chr2 118180041 118180352 -135076231 + AluY SINE Alu 1 311 0 240 267 40 67 chr2 118180483 118180558 -135076025 + MER58 DNA MER1_type 3 75 -311 948 114 0 0 chr2 118180566 118180698 -135075885 + MER58 DNA MER1_type 2287 2418 -2 454 266 73 34 chr2 118182061 118182238 -135074345 - MLT1G LTR MaLR -5 562 379 915 246 103 25 chr2 118182269 118182550 -135074033 - MLT1G LTR MaLR -287 303 1 301 328 115 26 chr2 118182550 118182968 -135073615 - L1ME LINE L1 -337 5784 5330 24 0 0 0 chr2 118183296 118183320 -135073263 + AT_rich Low_complexity Low_complexity 1 24 0 224 151 0 19 chr2 118183861 118183914 -135072669 + CT-rich Low_complexity Low_complexity 2 53 0 1810 137 3 52 chr2 118184054 118184386 -135072197 + AluJo SINE Alu 1 312 0 234 295 13 13 chr2 118185128 118185206 -135071377 + GA-rich Low_complexity Low_complexity 2 79 0 2622 178 43 41 chr2 118185882 118186439 -135070144 + MER74A LTR ERVL 1 558 0 4869 94 31 11 chr2 118186903 118187550 -135069033 + PABL_A LTR ERV1 1 660 0 3119 144 65 7 chr2 118187875 118188425 -135068158 - L1MB2 LINE L1 -2 6169 5588 6574 131 12 33 chr2 118188543 118189111 -135067472 - L1PB1 LINE L1 0 6151 5572 1974 129 0 0 chr2 118189111 118189374 -135067209 - AluSx SINE Alu -47 265 3 6574 131 12 33 chr2 118189374 118190897 -135065686 - L1PB1 LINE L1 -579 5572 4106 1774 181 0 17 chr2 118191571 118191863 -135064720 - AluJo SINE Alu -25 287 1 859 194 114 30 chr2 118192209 118192410 -135064173 + MER20 DNA MER1_type 2 219 0 459 247 126 32 chr2 118193159 118193349 -135063234 + MIR SINE MIR 48 255 -7 1690 216 56 22 chr2 118193372 118193817 -135062766 - MLT1C LTR MaLR -1 466 7 496 234 184 7 chr2 118194607 118194748 -135061835 - MER5A DNA MER1_type -2 187 22 267 291 15 96 chr2 118194935 118195147 -135061436 + MIR SINE MIR 32 229 -33 187 328 69 35 chr2 118195357 118195473 -135061110 - L2 LINE L2 -16 3256 3137 491 273 79 0 chr2 118195642 118195781 -135060802 + MIR SINE MIR 2 151 -111 1543 188 74 25 chr2 118195794 118196118 -135060465 - MER2 DNA MER2_type -5 340 1 187 205 96 60 chr2 118196118 118196201 -135060382 + MIR SINE MIR 156 241 -21 1494 274 22 43 chr2 118196554 118197000 -135059583 + MER70A LTR ERVL 4 440 -32 440 280 11 0 chr2 118197839 118197932 -135058651 + MIR SINE MIR 63 156 -106 1222 238 94 12 chr2 118197932 118198273 -135058310 - MLT1A2 LTR MaLR 0 374 6 1356 106 11 0 chr2 118198891 118199070 -135057513 - AluSq SINE Alu -128 185 5 241 62 0 225 chr2 118199081 118199161 -135057422 - L1MA9 LINE L1 -1 6311 6250 803 172 33 26 chr2 118199165 118199316 -135057267 - FRAM SINE Alu -24 152 1 596 116 0 0 chr2 118199318 118199404 -135057179 - L1MA9 LINE L1 -64 6248 6163 494 119 12 0 chr2 118201198 118201282 -135055301 + (TCCA)n Simple_repeat Simple_repeat 1 85 0 940 247 27 9 chr2 118201995 118202214 -135054369 - MIR SINE MIR -27 235 13 197 347 0 0 chr2 118203413 118203485 -135053098 - MIR SINE MIR -118 90 19 1626 167 3 53 chr2 118203686 118204009 -135052574 + AluJo SINE Alu 1 307 -5 740 316 27 9 chr2 118204671 118204896 -135051687 - MIR SINE MIR -9 253 25 199 379 48 29 chr2 118205426 118205632 -135050951 + L2 LINE L2 2529 2738 -576 2058 188 11 5 chr2 118208791 118209169 -135047414 + MLT1B LTR MaLR 1 380 -10 255 344 64 25 chr2 118209165 118209322 -135047261 + MLT1H LTR MaLR 256 418 -131 * 961 101 6 22 chr2 118210463 118210642 -135045941 + (TTCC)n Simple_repeat Simple_repeat 3 178 0 732 201 47 24 chr2 118211029 118211198 -135045385 + MER5B DNA MER1_type 5 177 -1 399 211 174 68 chr2 118211631 118211792 -135044791 + MER5A DNA MER1_type 12 189 0 7485 35 1 0 chr2 118211792 118212929 -135043654 + L1PA4 LINE L1 5036 6173 0 2153 246 98 17 chr2 118213754 118214381 -135042202 + L2 LINE L2 2122 2812 -502 2398 87 13 0 chr2 118214381 118214681 -135041902 + AluSx SINE Alu 1 304 -8 2153 246 98 17 chr2 118214681 118214745 -135041838 + L2 LINE L2 2812 2869 -445 577 296 104 28 chr2 118214750 118215105 -135041478 - LTR16A LTR ERVL -4 446 65 706 248 77 61 chr2 118215134 118215445 -135041138 + L2 LINE L2 2898 3213 -100 27 0 0 0 chr2 118215804 118215831 -135040752 + AT_rich Low_complexity Low_complexity 1 27 0 690 171 0 49 chr2 118216210 118216231 -135040352 + FLAM_C SINE Alu 2 22 -290 3640 158 52 19 chr2 118216231 118216846 -135039737 - MER41B LTR ERV1 0 635 1 690 171 0 49 chr2 118216846 118216947 -135039636 + FLAM_C SINE Alu 22 118 -194 22 0 0 0 chr2 118216949 118216971 -135039612 + AT_rich Low_complexity Low_complexity 1 22 0 441 36 0 0 chr2 118217392 118217447 -135039136 + (CA)n Simple_repeat Simple_repeat 2 56 0 1952 127 0 77 chr2 118217462 118217801 -135038782 + AluSq SINE Alu 1 313 0 220 281 78 0 chr2 118217863 118217927 -135038656 + L2 LINE L2 3187 3255 -17 30 45 0 0 chr2 118218232 118218276 -135038307 + AT_rich Low_complexity Low_complexity 1 44 0 34 24 0 0 chr2 118218824 118218865 -135037718 + AT_rich Low_complexity Low_complexity 1 41 0 183 346 31 55 chr2 118219025 118219152 -135037431 - MIR SINE MIR -111 151 28 192 97 0 0 chr2 118219567 118219598 -135036985 + (CA)n Simple_repeat Simple_repeat 1 31 0 238 257 38 76 chr2 118220450 118220555 -135036028 - MIR SINE MIR -105 157 57 624 333 129 19 chr2 118220725 118221190 -135035393 - L3 LINE CR1 -13 1564 1049 280 304 59 0 chr2 118221974 118222076 -135034507 + MIR SINE MIR 136 243 -19 342 316 89 6 chr2 118222583 118222751 -135033832 - L1ME4a LINE L1 -157 5964 5783 197 288 56 48 chr2 118224652 118224777 -135031806 - L2 LINE L2 0 3313 3188 1815 213 17 50 chr2 118225807 118226267 -135030316 + MER65A LTR ERV1 1 445 0 2512 56 0 0 chr2 118226939 118227241 -135029342 - AluY SINE Alu -9 302 1 264 328 39 16 chr2 118228738 118228866 -135027717 - LTR16A1 LTR ERVL -326 131 1 1812 246 15 32 chr2 118228975 118229266 -135027317 - MER92C LTR ERV1 -15 539 259 1614 199 76 31 chr2 118229266 118229389 -135027194 + MLT1C LTR MaLR 1 117 -350 2271 120 3 0 chr2 118229389 118229688 -135026895 + AluSg SINE Alu 1 300 -10 1614 199 76 31 chr2 118229688 118230011 -135026572 + MLT1C LTR MaLR 117 467 0 1812 246 15 32 chr2 118230011 118230247 -135026336 - MER92C LTR ERV1 -295 259 21 217 311 86 88 chr2 118230334 118230777 -135025806 + L2 LINE L2 2826 3267 -5 320 200 7 129 chr2 118231031 118231171 -135025412 - L1ME4a LINE L1 -2 6119 5997 270 183 39 19 chr2 118231609 118231713 -135024870 + (CACCAT)n Simple_repeat Simple_repeat 3 108 0 220 286 0 0 chr2 118231713 118231769 -135024814 + CT-rich Low_complexity Low_complexity 2 57 0 2016 150 7 3 chr2 118232571 118232877 -135023706 - AluSx SINE Alu -5 307 1 529 262 113 7 chr2 118233227 118233368 -135023215 + MIR SINE MIR 107 262 0 1817 169 6 0 chr2 118233501 118233815 -135022768 - MLT1A1 LTR MaLR -1 364 49 674 281 112 53 chr2 118233822 118234314 -135022269 - L1ME4a LINE L1 -59 6062 5542 2199 180 120 2 chr2 118234869 118235320 -135021263 + MLT1D LTR MaLR 1 504 -1 1953 101 0 40 chr2 118235634 118235912 -135020671 + AluSx SINE Alu 1 267 -45 264 303 92 53 chr2 118236704 118236856 -135019727 + MIR SINE MIR 62 219 -43 368 232 141 28 chr2 118236958 118237100 -135019483 - L1ME4a LINE L1 -2 6119 5962 328 274 67 73 chr2 118239403 118239582 -135017001 + MIR SINE MIR 85 262 0 807 313 32 26 chr2 118239865 118240242 -135016341 - MLT1I LTR MaLR -10 399 21 274 341 85 8 chr2 118240901 118241030 -135015553 - MIR SINE MIR -13 249 111 2120 111 0 0 chr2 118241522 118241793 -135014790 - AluSx SINE Alu -21 291 21 213 213 0 0 chr2 118241839 118241886 -135014697 + (CA)n Simple_repeat Simple_repeat 2 48 0 181 328 60 0 chr2 118242227 118242294 -135014289 - L3b LINE CR1 -19 1564 1494 974 222 32 5 chr2 118242344 118242560 -135014023 + MER58A DNA MER1_type 1 222 -2 378 199 26 64 chr2 118242575 118242731 -135013852 + Charlie7 DNA MER1_type 2461 2610 -2 314 98 20 0 chr2 118242907 118242958 -135013625 + (TA)n Simple_repeat Simple_repeat 2 53 0 259 200 14 29 chr2 118242959 118243029 -135013554 + GA-rich Low_complexity Low_complexity 5 73 0 195 184 0 0 chr2 118244301 118244339 -135012244 + (CCA)n Simple_repeat Simple_repeat 1 38 0 4260 191 33 11 chr2 118244458 118245405 -135011178 - L1MB7 LINE L1 -19 6165 5163 1573 110 0 9 chr2 118245405 118245623 -135010960 - AluSc SINE Alu 0 309 94 4260 191 33 11 chr2 118245623 118246333 -135010250 - L1MB7 LINE L1 -1021 5163 4470 * 5548 154 33 9 chr2 118246321 118247390 -135009193 - L1MC1 LINE L1 0 6613 5519 3532 160 30 63 chr2 118247393 118248181 -135008402 - L1MC1 LINE L1 -5664 762 1 1973 221 36 10 chr2 118248158 118248452 -135008131 - L1MB7 LINE L1 -1650 4776 4462 * 2337 113 0 0 chr2 118248452 118248761 -135007822 - AluY SINE Alu -2 309 1 1973 221 36 10 chr2 118248761 118248969 -135007614 - L1MB7 LINE L1 -1964 4462 4261 1297 263 92 5 chr2 118248974 118249354 -135007229 - MLT1D LTR MaLR 0 505 93 768 219 14 5 chr2 118249367 118249586 -135006997 - L1MB7 LINE L1 -3579 2567 2347 349 177 63 0 chr2 118249586 118249665 -135006918 - MLT1D LTR MaLR -417 88 5 1025 201 56 7 chr2 118249669 118249972 -135006611 - L1M4c LINE L1 -2166 4478 4161 41646 40 1 1 chr2 118249987 118256091 -135000492 - L1PA3 LINE L1 -3 6152 51 4147 253 55 21 chr2 118256089 118258975 -134997608 - L1M4c LINE L1 -2467 4177 1101 * 4998 160 38 24 chr2 118259011 118260884 -134995699 - L1MA7 LINE L1 0 6291 4389 3748 229 47 35 chr2 118260866 118261982 -134994601 - L1M4c LINE L1 -5413 1129 1 * 390 271 83 56 chr2 118261984 118262128 -134994455 - MIR SINE MIR -111 151 4 3286 269 17 28 chr2 118262424 118263502 -134993081 + L1PA15-16 LINE L1 9 1302 -5547 726 103 81 22 chr2 118263525 118263661 -134992922 + L1PB4 LINE L1 5715 5858 -298 * 978 85 30 12 chr2 118263659 118263823 -134992760 - L1P5 LINE L1 -429 5727 5561 1179 117 0 0 chr2 118264014 118264194 -134992389 + (TA)n Simple_repeat Simple_repeat 1 180 0 216 97 0 0 chr2 118264195 118264226 -134992357 + (CATATA)n Simple_repeat Simple_repeat 2 32 0 253 269 0 0 chr2 118264597 118264675 -134991908 - L1M LINE L1 -932 5368 5291 351 268 55 0 chr2 118264808 118264935 -134991648 + MER94 DNA DNA 1 134 0 1722 203 45 43 chr2 118265725 118266214 -134990369 - MLT1D LTR MaLR -8 497 8 214 277 96 21 chr2 118268669 118268763 -134987820 - MIR SINE MIR -56 206 106 1841 161 7 4 chr2 118269460 118269740 -134986843 - AluJb SINE Alu -23 289 9 335 22 22 0 chr2 118270016 118270062 -134986521 + MADE1 DNA Mariner 27 73 -7 202 317 106 39 chr2 118270213 118270317 -134986266 + MIR SINE MIR 31 141 -67 216 67 0 0 chr2 118271150 118271180 -134985403 + (TTA)n Simple_repeat Simple_repeat 3 32 0 368 294 57 57 chr2 118272184 118272378 -134984205 + MIR3 SINE MIR 13 206 -2 369 256 100 50 chr2 118272723 118272883 -134983700 + MIR SINE MIR 59 226 -36 1609 159 16 9 chr2 118273172 118273487 -134983096 + L1MA6 LINE L1 5983 6299 -1 1864 125 10 30 chr2 118274494 118274797 -134981786 + AluJb SINE Alu 1 297 -15 415 318 53 53 chr2 118275364 118275609 -134980974 - L2 LINE L2 -1 3271 3027 201 307 156 34 chr2 118276173 118276411 -134980172 - L2 LINE L2 -1338 1976 1710 742 247 27 38 chr2 118277625 118277888 -134978695 + MER74A LTR ERVL 22 240 -318 2031 133 3 3 chr2 118277965 118278274 -134978309 - AluSx SINE Alu -3 309 1 409 238 38 0 chr2 118278275 118278380 -134978203 + MER74B LTR ERVL 447 555 -67 4076 75 2 6 chr2 118278585 118279121 -134977462 + L1PA13 LINE L1 5611 6144 -19 2227 105 3 13 chr2 118279833 118280146 -134976437 + AluSx SINE Alu 1 310 -2 308 231 22 22 chr2 118280315 118280406 -134976177 - MARNA DNA Mariner -180 406 316 2337 92 3 3 chr2 118280639 118280944 -134975639 - AluY SINE Alu -6 305 1 1898 136 3 7 chr2 118281335 118281622 -134974961 - AluJo SINE Alu -14 298 13 564 318 147 28 chr2 118282340 118283010 -134973573 + L2 LINE L2 2555 3313 0 190 284 123 12 chr2 118284760 118284841 -134971742 + L3 LINE CR1 1408 1497 -80 6647 59 24 0 chr2 118285490 118286289 -134970294 + L1PA8 LINE L1 5354 6171 -1 378 261 65 0 chr2 118287205 118287297 -134969286 - MIR SINE MIR -79 183 86 289 297 36 27 chr2 118288084 118288195 -134968388 - MIR3 SINE MIR -11 197 86 423 363 36 10 chr2 118289268 118289571 -134967012 - MLT1I LTR MaLR -83 326 16 8655 26 0 0 chr2 118290132 118291127 -134965456 - L1P1 LINE L1 -1216 4930 3936 3873 16 0 0 chr2 118291128 118291640 -134964943 + L1P1 LINE L1 4942 5453 -702 269 310 35 9 chr2 118292134 118292247 -134964336 - LTR67 LTR ERVL -14 543 428 881 239 6 22 chr2 118293402 118293582 -134963001 + MER45A DNA AcHobo 2 178 0 1492 224 8 55 chr2 118293947 118294339 -134962244 - MLT1A1 LTR MaLR 0 365 8 286 308 115 28 chr2 118294938 118295120 -134961463 - LTR33 LTR ERVL 0 521 324 463 274 89 24 chr2 118295211 118295379 -134961204 - LTR33 LTR ERVL -323 198 20 2102 113 3 10 chr2 118295779 118296088 -134960495 + AluSq SINE Alu 1 307 -6 182 235 39 0 chr2 118296235 118296286 -134960297 + L3 LINE CR1 210 262 -1315 230 341 63 67 chr2 118296418 118296673 -134959910 + L2 LINE L2 2974 3227 -45 356 336 40 8 chr2 118297430 118297555 -134959028 + L2 LINE L2 3134 3262 -10 295 288 0 0 chr2 118298255 118298328 -134958255 + (TCTA)n Simple_repeat Simple_repeat 2 74 0 287 282 14 0 chr2 118298328 118298399 -134958184 - L2 LINE L2 0 3272 3201 981 121 55 22 chr2 118298815 118298997 -134957586 - L1MA8 LINE L1 -4 6287 6100 1130 152 90 1 chr2 118299009 118299088 -134957495 - L1MA7 LINE L1 -187 6002 5931 1599 147 27 62 chr2 118299088 118299437 -134957146 + AluJo SINE Alu 1 339 0 1130 152 90 1 chr2 118299437 118299615 -134956968 - L1MA7 LINE L1 -258 5931 5691 2109 169 79 39 chr2 118299615 118300107 -134956476 - Charlie1a DNA MER1_type -26 1429 918 * 2739 223 60 16 chr2 118300103 118300775 -134955808 - Charlie1a DNA MER1_type -749 706 6 543 143 9 2 chr2 118301584 118301823 -134954760 + AluJo SINE Alu 14 308 -4 1995 120 3 3 chr2 118302363 118302692 -134953891 + AluSx SINE Alu 1 329 0 247 269 32 32 chr2 118302863 118302956 -134953627 - L1MC4 LINE L1 -36 8006 7914 2204 137 64 19 chr2 118303737 118304096 -134952487 + THE1C LTR MaLR 1 375 0 2634 184 8 8 chr2 118305275 118305790 -134950793 - L1MA9 LINE L1 -36 6276 5762 4052 150 88 14 chr2 118305861 118305910 -134950673 - MER72 LTR ERV1 0 722 678 2322 113 7 0 chr2 118305910 118306219 -134950364 - AluSq SINE Alu -2 311 1 4052 150 88 14 chr2 118306219 118306837 -134949746 - MER72 LTR ERV1 -44 678 5 4054 145 19 62 chr2 118307104 118307826 -134948757 + LTR8 LTR ERV1 1 691 0 372 318 171 0 chr2 118308482 118308652 -134947931 + MIR SINE MIR 11 209 -53 3199 172 14 58 chr2 118308653 118309293 -134947290 + LTR9 LTR ERV1 1 612 0 1883 57 0 0 chr2 118309306 118309536 -134947047 + L1PA10 LINE L1 5674 5903 -265 1730 140 30 4 chr2 118309735 118310006 -134946577 + L1PA10 LINE L1 5887 6164 -4 235 368 105 18 chr2 118310330 118310501 -134946082 + MIR3 SINE MIR 16 201 -7 246 272 76 11 chr2 118311471 118311563 -134945020 - MLT1J LTR MaLR -12 499 402 445 266 175 7 chr2 118312002 118312145 -134944438 + MER5A DNA MER1_type 13 179 -10 227 254 0 63 chr2 118312238 118312301 -134944282 + MER103 DNA DNA 61 119 -47 1025 219 84 92 chr2 118312302 118312610 -134943973 - MLT1C LTR MaLR 0 390 83 2085 117 0 7 chr2 118312610 118312935 -134943648 - AluSx SINE Alu 0 312 1 1025 219 84 92 chr2 118312935 118313013 -134943570 - MLT1C LTR MaLR -307 83 6 1570 210 10 7 chr2 118313723 118314028 -134942555 - L1MD2 LINE L1 -24 6335 6030 273 214 0 0 chr2 118314210 118314266 -134942317 - tRNA-Ile-ATT tRNA tRNA -21 56 1 200 35 35 0 chr2 118314579 118314608 -134941975 + (TTTTC)n Simple_repeat Simple_repeat 3 32 0 226 164 36 0 chr2 118314691 118314746 -134941837 + CT-rich Low_complexity Low_complexity 2 58 0 207 0 0 0 chr2 118314750 118314773 -134941810 + (CA)n Simple_repeat Simple_repeat 1 23 0 1592 311 70 9 chr2 118314897 118315536 -134941047 + MER20B DNA MER1_type 106 783 0 710 153 53 0 chr2 118315771 118315902 -134940681 + Charlie4 DNA MER1_type 1818 1955 -6 354 300 58 0 chr2 118316240 118316360 -134940223 + L2 LINE L2 3180 3306 -7 289 274 20 65 chr2 118317166 118317367 -134939216 - MLT1J2 LTR MaLR 0 450 259 2513 160 89 19 chr2 118317853 118318334 -134938249 + MLT2B2 LTR ERVL 1 515 0 246 306 35 0 chr2 118318359 118318444 -134938139 - L2 LINE L2 0 3313 3226 * 475 238 133 7 chr2 118318427 118318593 -134937990 + MIR SINE MIR 25 201 -61 271 267 99 30 chr2 118321033 118321134 -134935449 + MIR SINE MIR 81 188 -74 899 257 70 82 chr2 118321306 118321719 -134934864 + MLT1I LTR MaLR 2 409 0 665 295 98 30 chr2 118322146 118322380 -134934203 - MIR SINE MIR -10 252 3 336 292 112 37 chr2 118323550 118323711 -134932872 - MIR3 SINE MIR -21 187 15 420 294 31 21 chr2 118324650 118324795 -134931788 - MIR SINE MIR -67 141 19 606 102 45 0 chr2 118325262 118325350 -134931233 + L1PA8 LINE L1 6077 6168 -4 345 47 0 0 chr2 118325540 118325583 -134931000 + (TG)n Simple_repeat Simple_repeat 2 44 0 1750 194 121 32 chr2 118325705 118326143 -134930440 + MLT2B1 LTR ERVL 3 479 -41 379 177 21 10 chr2 118326148 118326244 -134930339 + (TATG)n Simple_repeat Simple_repeat 4 100 0 281 120 16 0 chr2 118326244 118326299 -134930284 + MLT2D LTR ERVL 376 414 0 215 61 30 0 chr2 118326630 118326663 -134929920 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 819 221 125 5 chr2 118327549 118327757 -134928826 + MIR SINE MIR 29 261 -1 2272 107 0 10 chr2 118328054 118328363 -134928220 - AluSx SINE Alu -6 306 1 235 259 19 0 chr2 118328682 118328736 -134927847 - L2 LINE L2 -337 2977 2923 1998 128 4 0 chr2 118328849 118329130 -134927453 + AluSc SINE Alu 1 282 -27 189 0 111 0 chr2 118329139 118329175 -134927408 + A-rich Low_complexity Low_complexity 2 41 0 237 163 0 0 chr2 118329201 118329244 -134927339 - L2 LINE L2 -7 3306 3264 1109 206 161 34 chr2 118329684 118329976 -134926607 + MSTD LTR MaLR 29 357 -39 913 199 6 28 chr2 118329980 118330156 -134926427 + FAM SINE Alu 1 172 -3 2653 109 22 6 chr2 118330179 118330537 -134926046 - THE1B LTR MaLR 0 364 1 291 133 44 0 chr2 118330537 118330582 -134926001 + MSTD LTR MaLR 411 457 0 1181 106 6 0 chr2 118330622 118330782 -134925801 - AluSg/x SINE Alu -9 303 143 2602 33 3 0 chr2 118330791 118331095 -134925488 - AluY SINE Alu -6 305 1 24 0 0 0 chr2 118332152 118332176 -134924407 + AT_rich Low_complexity Low_complexity 1 24 0 24 67 0 0 chr2 118332539 118332584 -134923999 + AT_rich Low_complexity Low_complexity 1 45 0 1612 181 55 3 chr2 118332588 118332881 -134923702 - AluJo SINE Alu -2 310 3 1686 93 0 13 chr2 118333675 118333900 -134922683 - AluSg SINE Alu -88 222 1 570 249 28 61 chr2 118333900 118334113 -134922470 - LTR2 LTR ERV1 -243 206 1 1704 102 4 0 chr2 118334185 118334410 -134922173 - AluSg SINE Alu -84 226 1 225 0 0 0 chr2 118334415 118334440 -134922143 + (TA)n Simple_repeat Simple_repeat 1 25 0 1747 97 18 61 chr2 118334440 118334718 -134921865 - AluSq SINE Alu -10 303 38 3506 230 28 3 chr2 118334841 118335697 -134920886 - ERVL LTR ERVL -362 5402 4526 374 291 108 49 chr2 118335861 118336155 -134920428 - L1M2a LINE L1 -5863 1235 304 1691 182 7 13 chr2 118336256 118336564 -134920019 + AluJb SINE Alu 7 312 0 356 374 7 0 chr2 118336571 118336710 -134919873 - MIR SINE MIR -102 160 21 338 331 47 14 chr2 118336905 118337053 -134919530 + L2 LINE L2 2932 3084 -188 1121 173 32 40 chr2 118337425 118337703 -134918880 + MER65A LTR ERV1 170 445 0 897 146 42 0 chr2 118339086 118339251 -134917332 + MSTC LTR MaLR 257 428 0 1073 206 29 18 chr2 118339251 118339528 -134917055 + L1MB8 LINE L1 5899 6178 0 2093 73 0 35 chr2 118339746 118340060 -134916523 - AluY SINE Alu -8 303 1 515 193 129 42 chr2 118340224 118340488 -134916095 - HAL1 LINE L1 -1313 1194 908 6133 26 1 0 chr2 118340920 118342034 -134914549 + L1PA3 LINE L1 4889 6003 -152 1433 158 16 0 chr2 118342036 118342283 -134914300 + L1P LINE L1 4208 4458 -1688 706 269 17 39 chr2 118342639 118342873 -134913710 - MER92C LTR ERV1 -305 249 21 217 311 86 88 chr2 118342960 118343403 -134913180 + L2 LINE L2 2826 3267 -5 313 216 7 122 chr2 118343657 118343796 -134912787 - L1ME4a LINE L1 -2 6119 5997 270 183 39 19 chr2 118344234 118344338 -134912245 + (CACCAT)n Simple_repeat Simple_repeat 3 108 0 220 286 0 0 chr2 118344338 118344394 -134912189 + CT-rich Low_complexity Low_complexity 2 57 0 1989 154 7 3 chr2 118345196 118345502 -134911081 - AluSx SINE Alu -5 307 1 529 262 113 7 chr2 118345852 118345993 -134910590 + MIR SINE MIR 107 262 0 1817 169 6 0 chr2 118346126 118346440 -134910143 - MLT1A1 LTR MaLR -1 364 49 674 281 112 53 chr2 118346447 118346939 -134909644 - L1ME4a LINE L1 -59 6062 5542 2199 180 120 2 chr2 118347494 118347945 -134908638 + MLT1D LTR MaLR 1 504 -1 1953 101 0 40 chr2 118348259 118348537 -134908046 + AluSx SINE Alu 1 267 -45 264 303 92 53 chr2 118349329 118349481 -134907102 + MIR SINE MIR 62 219 -43 368 232 141 28 chr2 118349583 118349725 -134906858 - L1ME4a LINE L1 -2 6119 5962 328 274 67 73 chr2 118351816 118351995 -134904588 + MIR SINE MIR 85 262 0 807 313 32 26 chr2 118352278 118352655 -134903928 - MLT1I LTR MaLR -10 399 21 274 341 85 8 chr2 118353314 118353443 -134903140 - MIR SINE MIR -13 249 111 2120 111 0 0 chr2 118353935 118354206 -134902377 - AluSx SINE Alu -21 291 21 213 213 0 0 chr2 118354252 118354299 -134902284 + (CA)n Simple_repeat Simple_repeat 2 48 0 181 328 60 0 chr2 118354640 118354707 -134901876 - L3b LINE CR1 -19 1564 1494 974 222 32 5 chr2 118354757 118354973 -134901610 + MER58A DNA MER1_type 1 222 -2 378 199 26 64 chr2 118354988 118355144 -134901439 + Charlie7 DNA MER1_type 2461 2610 -2 314 98 20 0 chr2 118355320 118355371 -134901212 + (TA)n Simple_repeat Simple_repeat 2 53 0 259 200 14 29 chr2 118355372 118355442 -134901141 + GA-rich Low_complexity Low_complexity 5 73 0 195 184 0 0 chr2 118356714 118356752 -134899831 + (CCA)n Simple_repeat Simple_repeat 1 38 0 4181 190 33 15 chr2 118356871 118357825 -134898758 - L1MB7 LINE L1 -19 6165 5165 1560 118 0 0 chr2 118357825 118358037 -134898546 - AluSc SINE Alu -4 305 94 4181 190 33 15 chr2 118358037 118358747 -134897836 - L1MB7 LINE L1 -1019 5165 4470 * 5501 156 33 9 chr2 118358735 118359804 -134896779 - L1MC1 LINE L1 0 6613 5519 3496 158 30 66 chr2 118359807 118360597 -134895986 - L1MC1 LINE L1 -5664 762 1 1973 221 36 10 chr2 118360574 118360868 -134895715 - L1MB7 LINE L1 -1650 4776 4462 * 2337 113 0 0 chr2 118360868 118361177 -134895406 - AluY SINE Alu -2 309 1 1973 221 36 10 chr2 118361177 118361385 -134895198 - L1MB7 LINE L1 -1964 4462 4261 1337 264 84 5 chr2 118361390 118361773 -134894810 - MLT1D LTR MaLR 0 505 93 768 219 14 5 chr2 118361786 118362005 -134894578 - L1MB7 LINE L1 -3579 2567 2347 349 177 63 0 chr2 118362005 118362084 -134894499 - MLT1D LTR MaLR -417 88 5 1025 201 56 7 chr2 118362088 118362391 -134894192 - L1M4c LINE L1 -2166 4478 4161 41728 39 1 2 chr2 118362406 118368516 -134888067 - L1PA3 LINE L1 -3 6152 51 4165 252 56 21 chr2 118368514 118371400 -134885183 - L1M4c LINE L1 -2467 4177 1101 * 4650 163 39 28 chr2 118371436 118373314 -134883269 - L1MA7 LINE L1 0 6291 4389 3748 229 47 35 chr2 118373296 118374412 -134882171 - L1M4c LINE L1 -5413 1129 1 * 390 271 83 56 chr2 118374414 118374558 -134882025 - MIR SINE MIR -111 151 4 3286 269 17 28 chr2 118374854 118375932 -134880651 + L1PA15-16 LINE L1 9 1302 -5547 726 103 81 22 chr2 118375955 118376091 -134880492 + L1PB4 LINE L1 5715 5858 -298 * 978 85 30 12 chr2 118376089 118376253 -134880330 - L1P5 LINE L1 -429 5727 5561 1146 122 0 0 chr2 118376448 118376628 -134879955 + (TA)n Simple_repeat Simple_repeat 1 180 0 192 77 0 0 chr2 118376630 118376656 -134879927 + (CATATA)n Simple_repeat Simple_repeat 1 26 0 253 269 0 0 chr2 118377027 118377105 -134879478 - L1M LINE L1 -932 5368 5291 351 268 55 0 chr2 118377238 118377365 -134879218 + MER94 DNA DNA 1 134 0 1722 203 45 43 chr2 118378156 118378645 -134877938 - MLT1D LTR MaLR -8 497 8 1631 177 38 30 chr2 118378968 118379364 -134877219 - L1MA7 LINE L1 -155 6136 5738 2206 79 0 0 chr2 118380410 118380690 -134875893 + AluY SINE Alu 1 280 -31 251 245 19 57 chr2 118380853 118381012 -134875571 - AluYa5 SINE Alu -1 300 148 17505 34 6 3 chr2 118381117 118383379 -134873204 - L1P LINE L1 -898 5248 2982 2231 92 0 0 chr2 118383422 118383738 -134872845 + AluY SINE Alu 1 316 0 7451 33 3 0 chr2 118383951 118385487 -134871096 + L1PA4 LINE L1 4617 6155 0 2186 93 0 45 chr2 118385636 118385947 -134870636 - AluY SINE Alu -14 297 1 352 257 75 102 chr2 118387409 118387674 -134868909 + HAL1 LINE L1 2249 2506 -1 293 274 0 0 chr2 118387789 118387851 -134868732 + L2 LINE L2 3210 3271 -1 313 274 40 32 chr2 118388079 118388203 -134868380 - HAL1 LINE L1 -800 1707 1583 329 357 63 16 chr2 118389764 118390016 -134866567 + L2 LINE L2 1565 1828 -1486 1057 303 64 51 chr2 118390305 118391117 -134865466 - L1ME3A LINE L1 -220 5950 5150 1675 180 18 7 chr2 118391117 118391432 -134865151 - AluJb SINE Alu 0 318 1 1057 303 64 51 chr2 118391432 118392648 -134863935 - L1ME3A LINE L1 -1020 5150 3893 661 318 64 61 chr2 118392717 118393452 -134863131 - L1ME3A LINE L1 -2358 3788 3052 517 329 35 31 chr2 118393492 118393811 -134862772 - LTR16A LTR ERVL -106 344 25 1691 181 23 13 chr2 118394758 118395068 -134861515 - AluSq SINE Alu 0 313 1 1116 326 80 17 chr2 118395093 118396283 -134860300 - L1M4 LINE L1 -989 5157 3893 676 318 62 61 chr2 118396352 118397088 -134859495 - L1M4 LINE L1 -2358 3788 3052 502 333 19 30 chr2 118397128 118397392 -134859191 - LTR16A LTR ERVL -106 344 84 344 250 86 0 chr2 118397560 118397700 -134858883 - L1M4 LINE L1 -3332 2814 2663 222 62 0 0 chr2 118397896 118397928 -134858655 + (CA)n Simple_repeat Simple_repeat 2 33 0 421 270 227 14 chr2 118397933 118398143 -134858440 - MIR SINE MIR -14 248 10 206 266 188 57 chr2 118398321 118398513 -134858070 - L2 LINE L2 -34 3238 3022 197 83 28 0 chr2 118399313 118399349 -134857234 + (TTTTC)n Simple_repeat Simple_repeat 2 38 0 283 299 29 52 chr2 118399556 118399730 -134856853 + MLT1K LTR MaLR 156 325 -263 534 187 8 49 chr2 118399942 118400065 -134856518 + L2 LINE L2 3192 3309 -4 325 245 73 83 chr2 118400222 118400426 -134856157 - L1ME3A LINE L1 0 6170 5961 312 267 111 15 chr2 118400492 118400627 -134855956 - L1ME3A LINE L1 -219 5951 5804 415 259 147 17 chr2 118400664 118401165 -134855418 - L1ME3A LINE L1 -434 5736 5154 496 244 16 0 chr2 118401215 118401342 -134855241 - MLT1F1 LTR MaLR -397 170 42 205 346 19 19 chr2 118401617 118401724 -134854859 - L2 LINE L2 -778 2536 2430 195 315 0 0 chr2 118401824 118401878 -134854705 + MIR SINE MIR 202 255 -7 805 251 16 31 chr2 118403684 118403875 -134852708 - MER5A DNA MER1_type 0 189 2 584 240 11 17 chr2 118403885 118404060 -134852523 + MER5B DNA MER1_type 2 175 -3 224 190 300 40 chr2 118404074 118404174 -134852409 - MER5A DNA MER1_type -3 186 61 1039 198 14 56 chr2 118404191 118404479 -134852104 - L1ME1 LINE L1 -14 6152 5877 2036 150 40 72 chr2 118406251 118406697 -134849886 + MSTB1 LTR MaLR 1 432 0 2194 128 8 3 chr2 118406754 118407114 -134849469 - L1M2 LINE L1 -497 5794 5433 352 143 29 0 chr2 118407115 118407185 -134849398 + L1MA7 LINE L1 6215 6286 -5 412 321 49 11 chr2 118407250 118407434 -134849149 - MIR SINE MIR -52 210 20 23 0 0 0 chr2 118407670 118407693 -134848890 + AT_rich Low_complexity Low_complexity 1 23 0 597 286 58 27 chr2 118407697 118407956 -134848627 + L1ME3A LINE L1 5626 5892 -278 338 258 65 0 chr2 118408622 118408715 -134847868 + MER94 DNA DNA 15 113 -21 1461 213 95 39 chr2 118408919 118409361 -134847222 - MLT1C LTR MaLR 0 467 1 22 0 0 0 chr2 118410078 118410100 -134846483 + AT_rich Low_complexity Low_complexity 1 22 0 589 199 37 14 chr2 118410636 118410803 -134845780 + L1MD3 LINE L1 7737 7982 -13 279 310 26 26 chr2 118411391 118411504 -134845079 - MIR SINE MIR -63 145 33 1864 152 37 45 chr2 118412121 118412497 -134844086 + THE1C LTR MaLR 3 375 0 230 150 0 25 chr2 118413626 118413666 -134842917 + L2 LINE L2 3222 3260 -12 342 129 0 0 chr2 118414410 118414472 -134842111 + (TG)n Simple_repeat Simple_repeat 1 62 0 2096 106 0 3 chr2 118414513 118414899 -134841684 - AluSg SINE Alu 0 385 1 190 400 131 0 chr2 118415067 118415197 -134841386 + L2 LINE L2 3125 3271 -1 219 272 19 68 chr2 118415341 118415444 -134841139 + MER5A DNA MER1_type 92 189 0 949 67 0 15 chr2 118415716 118415850 -134840733 + L1PA5 LINE L1 6023 6154 0 2175 119 0 0 chr2 118415876 118416169 -134840414 + AluSc SINE Alu 1 293 -16 298 345 73 29 chr2 118416379 118416762 -134839821 - MLT1L LTR MaLR -2 613 214 211 322 0 0 chr2 118417024 118417083 -134839500 + (TG)n Simple_repeat Simple_repeat 1 59 0 1045 162 11 0 chr2 118417550 118417741 -134838842 + L1PA16 LINE L1 5937 6129 -37 2147 130 0 16 chr2 118417963 118418279 -134838304 - AluSx SINE Alu -1 311 1 495 309 21 27 chr2 118419023 118419211 -134837372 - MIR3 SINE MIR -3 205 19 226 211 63 74 chr2 118419421 118419516 -134837067 - MER20B DNA MER1_type -606 177 84 421 202 22 0 chr2 118420551 118420640 -134835943 - L1MC3 LINE L1 -645 7140 7050 30 77 0 0 chr2 118420650 118420715 -134835868 + AT_rich Low_complexity Low_complexity 1 65 0 7252 178 41 19 chr2 118420754 118422366 -134834217 - L1MC3 LINE L1 -759 7026 5380 343 273 23 0 chr2 118422688 118422776 -134833807 - L1MC4 LINE L1 -1339 6703 6614 2152 241 53 38 chr2 118422790 118423604 -134832979 - L1ME1 LINE L1 -76 6090 5236 2304 106 0 3 chr2 118423604 118423907 -134832676 - AluSp SINE Alu -11 302 1 2152 241 53 38 chr2 118423907 118424460 -134832123 - L1ME1 LINE L1 -930 5236 4693 715 324 81 42 chr2 118424569 118425146 -134831437 + L2 LINE L2 2698 3299 -14 2211 165 31 33 chr2 118425191 118425547 -134831036 + MER68 LTR ERV1 7 363 -199 2967 163 8 4 chr2 118425547 118426031 -134830552 - MER66B LTR ERV1 0 486 1 2211 165 31 33 chr2 118426031 118426129 -134830454 + MER68 LTR ERV1 363 460 -102 514 268 47 0 chr2 118426155 118426282 -134830301 + MIR SINE MIR 65 197 -65 2300 70 3 10 chr2 118427294 118427596 -134828987 + AluY SINE Alu 1 300 -11 207 305 0 119 chr2 118428330 118428448 -134828135 + L3b LINE CR1 1465 1568 -15 235 226 186 20 chr2 118428572 118428674 -134827909 - L2 LINE L2 -5 3308 3190 299 262 57 33 chr2 118428920 118429042 -134827541 - MIR SINE MIR -110 152 28 251 170 21 0 chr2 118429148 118429195 -134827388 + MLT1I LTR MaLR 362 409 0 1755 207 48 18 chr2 118430104 118430389 -134826194 - L1ME1 LINE L1 -46 6120 5816 198 0 0 0 chr2 118430389 118430411 -134826172 + (TA)n Simple_repeat Simple_repeat 2 23 0 1755 207 48 18 chr2 118430411 118430564 -134826019 - L1ME1 LINE L1 -350 5816 5669 338 270 129 11 chr2 118430645 118430862 -134825721 - MLT1J1 LTR MaLR -133 317 62 232 284 148 0 chr2 118430929 118431010 -134825573 - L2 LINE L2 0 3313 3221 21 36 0 0 chr2 118431590 118431618 -134824965 + AT_rich Low_complexity Low_complexity 1 28 0 193 40 0 0 chr2 118432097 118432122 -134824461 + (TTTG)n Simple_repeat Simple_repeat 1 52 0 2212 101 0 0 chr2 118432122 118432400 -134824183 - AluSg1 SINE Alu -31 278 1 24 53 0 0 chr2 118432718 118432756 -134823827 + AT_rich Low_complexity Low_complexity 1 38 0 252 169 60 36 chr2 118432756 118432839 -134823744 - L1PB4 LINE L1 0 6156 6072 2326 101 146 214 chr2 118432843 118433715 -134822868 + pTR5 LTR ERV1 31 581 -133 808 211 6 6 chr2 118433716 118433882 -134822701 - L1PB4 LINE L1 -52 6104 5939 5671 152 20 2 chr2 118434304 118435530 -134821053 + L1MA4 LINE L1 5049 6294 -6 2188 118 6 59 chr2 118436171 118436526 -134820057 - MER1B DNA MER1_type 0 337 2 693 213 69 0 chr2 118436718 118436878 -134819705 - MER45A DNA AcHobo -7 171 1 205 307 114 11 chr2 118436888 118436976 -134819607 - L2 LINE L2 -36 3236 3140 576 293 21 32 chr2 118436982 118437262 -134819321 - MARNA DNA Mariner -160 426 150 182 250 12 62 chr2 118439172 118439252 -134817331 - L2 LINE L2 -2 3270 3195 2043 180 33 19 chr2 118439341 118439769 -134816814 - Tigger2a DNA MER2_type 0 434 1 817 203 58 21 chr2 118441991 118442526 -134814057 - MLT1E1 LTR MaLR 0 654 3 273 364 131 5 chr2 118442536 118442734 -134813849 + MIR SINE MIR 20 242 -20 236 102 20 20 chr2 118443148 118443197 -134813386 - L1ME4a LINE L1 -109 6012 5964 602 237 13 40 chr2 118443373 118443525 -134813058 + L2 LINE L2 3165 3312 -1 1914 212 52 23 chr2 118444164 118444640 -134811943 + MLT1E2 LTR MaLR 137 626 0 396 272 105 9 chr2 118444962 118445076 -134811507 + L1ME LINE L1 45 169 -5901 415 309 109 66 chr2 118445499 118445849 -134810734 + L1ME LINE L1 281 645 -5425 919 199 34 51 chr2 118445854 118446090 -134810493 - MLT1F1 LTR MaLR -12 555 324 211 225 0 0 chr2 118446323 118446363 -134810220 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 33 35 0 17 chr2 118446410 118446435 -134810148 + AT_rich Low_complexity Low_complexity 1 25 -32 2280 89 0 7 chr2 118446435 118446727 -134809856 + AluSx SINE Alu 1 290 -22 33 35 0 17 chr2 118446727 118446759 -134809824 + AT_rich Low_complexity Low_complexity 25 57 0 250 280 115 66 chr2 118446933 118447115 -134809468 + MIR SINE MIR 65 255 -7 278 280 34 91 chr2 118448579 118448843 -134807740 + HAL1b LINE L1 359 607 -741 26 0 0 0 chr2 118448844 118448870 -134807713 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr2 118449204 118449226 -134807357 + AT_rich Low_complexity Low_complexity 1 22 0 575 290 51 45 chr2 118449435 118450038 -134806545 + L1M4 LINE L1 3624 4223 -1923 297 330 134 5 chr2 118450256 118450450 -134806133 + MIR SINE MIR 14 232 -30 202 321 14 64 chr2 118451244 118451384 -134805199 - L2 LINE L2 -3 3269 3137 21 0 0 0 chr2 118451880 118451901 -134804682 + AT_rich Low_complexity Low_complexity 1 21 0 2569 114 8 0 chr2 118451912 118452271 -134804312 + THE1B LTR MaLR 3 364 0 483 258 8 0 chr2 118452919 118453051 -134803532 - MER94 DNA DNA -1 133 1 2477 108 3 0 chr2 118453597 118453959 -134802624 - L1PB1 LINE L1 -2 6149 5787 283 113 32 0 chr2 118453967 118454029 -134802554 + (TA)n Simple_repeat Simple_repeat 2 65 0 5682 110 11 32 chr2 118454042 118454401 -134802182 - L1PA11 LINE L1 0 6174 5809 221 0 0 33 chr2 118454401 118454431 -134802152 + (TTG)n Simple_repeat Simple_repeat 2 30 0 5682 110 11 32 chr2 118454431 118455480 -134801103 - L1PA11 LINE L1 -365 5809 4793 737 106 65 0 chr2 118455480 118455603 -134800980 - L1PB1 LINE L1 -369 5782 5652 210 143 0 0 chr2 118455610 118455645 -134800938 + (TCTCC)n Simple_repeat Simple_repeat 4 38 0 2041 112 10 10 chr2 118455645 118455940 -134800643 - AluSp SINE Alu -18 295 1 4819 176 23 185 chr2 118455941 118456575 -134800008 - L1P5 LINE L1 -464 6403 5668 263 135 0 0 chr2 118456575 118456612 -134799971 + tRNA-Tyr-TAC tRNA tRNA 1 37 -39 4819 176 23 185 chr2 118456612 118457102 -134799481 - L1P5 LINE L1 -1199 5668 5100 383 143 41 41 chr2 118457102 118457200 -134799383 + MER4A LTR ERV1 1 98 -566 4819 176 23 185 chr2 118457200 118457253 -134799330 - L1P5 LINE L1 -1767 5100 5040 1720 139 0 33 chr2 118457253 118457556 -134799027 + MER4A LTR ERV1 372 664 0 4819 176 23 185 chr2 118457556 118458651 -134797932 - L1P5 LINE L1 -1827 5040 4163 * 12011 130 9 7 chr2 118458638 118458689 -134797894 - L1P5 LINE L1 -4886 1977 1928 2478 48 0 22 chr2 118458689 118459000 -134797583 - AluY SINE Alu -7 304 1 12011 130 9 7 chr2 118459000 118460919 -134795664 - L1P5 LINE L1 -4935 1928 3 345 121 20 152 chr2 118461294 118461393 -134795190 + MER63 DNA MER1_type 2 713 -123 989 250 30 5 chr2 118461401 118461790 -134794793 - L1M4 LINE L1 -1029 5117 4638 263 191 0 0 chr2 118463478 118463525 -134793058 - MIR SINE MIR -15 247 201 566 230 63 86 chr2 118463529 118463751 -134792832 + L2 LINE L2 3097 3313 0 361 343 60 0 chr2 118463774 118463908 -134792675 - MIR SINE MIR -108 154 13 514 304 60 16 chr2 118463927 118464111 -134792472 - MIR SINE MIR -70 192 1 30 77 0 0 chr2 118466225 118466290 -134790293 + AT_rich Low_complexity Low_complexity 1 65 0 456 341 154 26 chr2 118466376 118466766 -134789817 + L2 LINE L2 2493 2932 -382 304 299 104 21 chr2 118466857 118467001 -134789582 + L2 LINE L2 3119 3274 -39 29 0 0 0 chr2 118468275 118468304 -134788279 + AT_rich Low_complexity Low_complexity 1 29 0 2849 130 14 0 chr2 118468338 118468760 -134787823 - MSTA LTR MaLR 0 428 1 255 221 25 63 chr2 118469158 118469316 -134787267 + L1ME LINE L1 5250 5401 -745 2354 85 17 0 chr2 118469418 118469712 -134786871 + AluY SINE Alu 1 299 -12 200 302 35 12 chr2 118471365 118471451 -134785132 + MIR SINE MIR 77 164 -98 223 306 28 0 chr2 118471526 118471598 -134784985 + MIR3 SINE MIR 124 197 -11 1809 167 11 42 chr2 118472337 118472714 -134783869 + MLT1A1 LTR MaLR 1 365 0 226 170 38 19 chr2 118472742 118472795 -134783788 + CT-rich Low_complexity Low_complexity 3 56 0 309 297 20 10 chr2 118473125 118473226 -134783357 - L1MC/D LINE L1 -2028 5780 5679 24 100 0 0 chr2 118473779 118473859 -134782724 + AT_rich Low_complexity Low_complexity 1 80 0 1790 130 85 23 chr2 118475677 118476030 -134780553 + THE1C LTR MaLR 1 375 0 213 108 0 0 chr2 118476076 118476113 -134780470 + (TG)n Simple_repeat Simple_repeat 2 38 0 787 278 88 56 chr2 118476114 118476581 -134780002 + MLT1G1 LTR MaLR 96 577 -18 555 298 43 39 chr2 118476591 118476846 -134779737 + MIR SINE MIR 7 262 0 189 286 204 0 chr2 118477309 118477407 -134779176 - L2 LINE L2 -5 3308 3191 327 309 161 43 chr2 118477746 118477908 -134778675 - MER5A DNA MER1_type 0 189 9 2071 144 72 65 chr2 118478033 118478462 -134778121 + MSTB1 LTR MaLR 1 432 0 22 35 0 0 chr2 118478782 118478811 -134777772 + AT_rich Low_complexity Low_complexity 1 29 0 315 269 96 13 chr2 118479262 118479418 -134777165 + L1MC5 LINE L1 7060 7228 -733 624 233 76 36 chr2 118479600 118479849 -134776734 + L1MC5 LINE L1 7318 7576 -385 253 286 101 28 chr2 118479940 118480118 -134776465 + L1ME LINE L1 5386 5576 -588 9385 205 50 29 chr2 118480316 118481210 -134775373 - L1MC2 LINE L1 0 7757 6883 252 0 0 0 chr2 118481210 118481238 -134775345 + (TG)n Simple_repeat Simple_repeat 1 28 0 9385 205 50 29 chr2 118481238 118482896 -134773687 - L1MC2 LINE L1 -874 6883 5186 258 216 112 52 chr2 118483423 118483539 -134773044 - HAL1b LINE L1 -561 787 665 22 35 0 0 chr2 118485020 118485049 -134771534 + AT_rich Low_complexity Low_complexity 1 29 0 347 294 109 33 chr2 118486664 118486848 -134769735 - HAL1b LINE L1 -1096 252 55 208 143 29 0 chr2 118487450 118487485 -134769098 + CT-rich Low_complexity Low_complexity 2 37 0 578 193 64 0 chr2 118487967 118488076 -134768507 + FLAM_A SINE Alu 1 116 -17 198 143 0 0 chr2 118488175 118488210 -134768373 + (TAAA)n Simple_repeat Simple_repeat 1 35 0 361 266 53 39 chr2 118488404 118488611 -134767972 + HAL1 LINE L1 2294 2503 -4 23 33 0 0 chr2 118488616 118488646 -134767937 + AT_rich Low_complexity Low_complexity 1 30 0 392 303 29 57 chr2 118489927 118490138 -134766445 - MIR3 SINE MIR -54 208 4 513 280 47 0 chr2 118491327 118491477 -134765106 - MIR SINE MIR -17 245 89 736 331 85 43 chr2 118492724 118493428 -134763155 + L2 LINE L2 2530 3271 -1 2258 201 65 2 chr2 118494145 118494653 -134761930 - L1MB1 LINE L1 -1 6167 5628 2322 112 0 3 chr2 118494969 118495274 -134761309 + AluSx SINE Alu 1 304 -8 216 0 0 0 chr2 118495899 118495923 -134760660 + (T)n Simple_repeat Simple_repeat 1 24 0 22 0 0 0 chr2 118497208 118497230 -134759353 + AT_rich Low_complexity Low_complexity 1 22 0 188 402 19 0 chr2 118497618 118497725 -134758858 + L2 LINE L2 3205 3313 0 311 274 34 14 chr2 118497916 118498062 -134758521 - MER103 DNA DNA -1 165 17 594 295 81 0 chr2 118498083 118498293 -134758290 - L2 LINE L2 -5 3308 3082 907 200 7 0 chr2 118498309 118498459 -134758124 - FRAM SINE Alu -25 151 1 656 275 90 8 chr2 118498459 118498703 -134757880 - L2 LINE L2 -233 3080 2817 295 275 100 8 chr2 118498880 118499000 -134757583 + MIR SINE MIR 124 254 -8 1828 120 3 65 chr2 118499102 118499410 -134757173 + AluSg SINE Alu 1 289 -21 417 292 24 12 chr2 118500049 118500217 -134756366 - L1MC/D LINE L1 -2052 5756 5587 1206 282 153 21 chr2 118500701 118501143 -134755440 - HAL1 LINE L1 -627 1880 1498 1980 147 13 3 chr2 118501143 118501442 -134755141 - AluSx SINE Alu -10 302 1 1206 282 153 21 chr2 118501442 118501769 -134754814 - HAL1 LINE L1 -1009 1498 1009 657 318 97 27 chr2 118501789 118502183 -134754400 - HAL1 LINE L1 -2028 479 49 1261 220 65 49 chr2 118502183 118502551 -134754032 + MLT1A2 LTR MaLR 1 374 0 657 318 97 27 chr2 118502551 118502600 -134753983 - HAL1 LINE L1 -2458 49 5 2572 45 0 7 chr2 118502752 118503060 -134753523 - AluY SINE Alu -5 306 1 621 200 48 35 chr2 118504112 118504257 -134752326 - MER58B DNA MER1_type 0 341 195 21 57 0 0 chr2 118505790 118505825 -134750758 + AT_rich Low_complexity Low_complexity 1 35 0 367 155 14 0 chr2 118505943 118506014 -134750569 - MER116 DNA Mariner -8 72 1 237 333 94 25 chr2 118506296 118506455 -134750128 - MIR SINE MIR -92 170 1 230 342 33 33 chr2 118506637 118506757 -134749826 - MER5A DNA MER1_type -26 163 44 25 65 0 0 chr2 118506813 118506859 -134749724 + AT_rich Low_complexity Low_complexity 1 46 0 499 121 143 11 chr2 118506865 118506956 -134749627 - U13 snRNA snRNA -1 103 1 242 303 101 37 chr2 118506962 118507071 -134749512 - MIR SINE MIR -62 146 31 1807 172 3 7 chr2 118508418 118508721 -134747862 - AluSq SINE Alu -11 302 1 1487 129 5 0 chr2 118510327 118510529 -134746054 - AluSp SINE Alu -110 203 1 256 307 25 55 chr2 118511229 118511392 -134745191 - L3 LINE CR1 -103 1474 1317 288 314 21 50 chr2 118511586 118511726 -134744857 - L3 LINE CR1 -270 1307 1172 2472 159 17 0 chr2 118512132 118512552 -134744031 - MSTA LTR MaLR -1 427 1 513 68 0 0 chr2 118512559 118512633 -134743950 + L1P LINE L1 3179 3252 -2894 2004 125 0 0 chr2 118512796 118513077 -134743506 + AluY SINE Alu 1 281 -30 819 201 11 17 chr2 118513297 118513476 -134743107 + MER5B DNA MER1_type 1 178 0 308 288 120 8 chr2 118513476 118513601 -134742982 - L3 LINE CR1 -793 784 646 665 237 63 93 chr2 118514606 118514639 -134741944 - MER20B DNA MER1_type -7 776 744 1487 103 29 46 chr2 118514639 118514920 -134741663 - L1MA5A LINE L1 0 6297 6022 665 237 63 93 chr2 118514920 118515359 -134741224 - MER20B DNA MER1_type -39 744 318 1282 267 120 22 chr2 118515430 118516056 -134740527 + L1ME3A LINE L1 5453 6139 -31 29 0 0 0 chr2 118516328 118516357 -134740226 + AT_rich Low_complexity Low_complexity 1 29 0 263 176 118 0 chr2 118516540 118516608 -134739975 + MER113 DNA MER1_type? 351 426 -95 2220 159 64 17 chr2 118517240 118517649 -134738934 + MSTA LTR MaLR 1 428 0 260 267 0 0 chr2 118517682 118517757 -134738826 - MER116 DNA Mariner 0 80 6 214 258 97 0 chr2 118517860 118517922 -134738661 + MIR SINE MIR 64 131 -77 25 65 0 0 chr2 118518126 118518172 -134738411 + AT_rich Low_complexity Low_complexity 1 46 0 23 0 0 0 chr2 118518853 118518876 -134737707 + AT_rich Low_complexity Low_complexity 1 23 0 616 51 0 0 chr2 118519955 118520033 -134736550 - L1P3 LINE L1 -401 5771 5694 1617 77 0 0 chr2 118520033 118520241 -134736342 + L1PA8 LINE L1 5965 6172 0 249 383 0 21 chr2 118521326 118521420 -134735163 + MIR SINE MIR 22 113 -95 253 241 13 13 chr2 118522647 118522726 -134733857 + MIR3 SINE MIR 99 177 -31 703 304 73 53 chr2 118522964 118523513 -134733070 - L1MEc LINE L1 -4581 1729 1170 304 193 0 79 chr2 118523541 118523655 -134732928 - L1MEc LINE L1 -5010 1109 1005 249 57 0 0 chr2 118524079 118524114 -134732469 + (TG)n Simple_repeat Simple_repeat 2 36 0 211 374 78 17 chr2 118524739 118524918 -134731665 - L2 LINE L2 -468 2846 2657 2488 197 38 16 chr2 118525477 118525990 -134730593 - L1MD1 LINE L1 -124 6118 5591 180 0 0 0 chr2 118525990 118526010 -134730573 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2488 197 38 16 chr2 118526010 118526045 -134730538 - L1MD1 LINE L1 -651 5591 5558 5089 70 4 42 chr2 118526058 118526791 -134729792 - L1PA7 LINE L1 -1 6153 5449 14378 119 5 10 chr2 118526791 118529221 -134727362 - L1P LINE L1 -2604 3542 1126 14062 34 5 3 chr2 118529484 118531965 -134724618 - L1PA4 LINE L1 0 6155 3673 8795 41 4 14 chr2 118531968 118533168 -134723415 + L1PA4 LINE L1 2500 3687 -2459 2384 113 0 0 chr2 118533269 118533579 -134723004 - AluSg SINE Alu 0 310 1 509 333 33 25 chr2 118534054 118534297 -134722286 - L3 LINE CR1 -1050 527 283 227 238 0 83 chr2 118534570 118534654 -134721929 - L2 LINE L2 -11 3261 3185 473 188 39 0 chr2 118534872 118535000 -134721583 - L1MA4 LINE L1 -6 6294 6162 22 70 0 0 chr2 118535460 118535503 -134721080 + AT_rich Low_complexity Low_complexity 1 43 0 217 196 20 20 chr2 118535773 118535824 -134720759 + (CATATA)n Simple_repeat Simple_repeat 4 54 0 797 257 127 67 chr2 118537119 118537434 -134719149 + L2 LINE L2 1997 2330 -984 1786 195 16 21 chr2 118537434 118537814 -134718769 + MER68 LTR ERV1 1 378 -184 2080 115 3 7 chr2 118537831 118538126 -134718457 - AluY SINE Alu -17 294 1 325 275 32 93 chr2 118538980 118539172 -134717411 - MER102b DNA MER1_type -1095 333 158 2740 148 31 22 chr2 118539172 118539721 -134716862 + L1MA7 LINE L1 5738 6291 0 325 275 32 93 chr2 118539721 118539775 -134716808 - MER102b DNA MER1_type -1270 158 102 317 234 109 106 chr2 118540500 118540564 -134716019 + MER112 DNA MER1_type 3 65 -195 216 0 0 0 chr2 118540564 118540588 -134715995 + (CA)n Simple_repeat Simple_repeat 2 25 0 317 234 109 106 chr2 118540588 118540779 -134715804 + MER112 DNA MER1_type 65 259 -1 372 234 0 0 chr2 118540910 118541004 -134715579 + GA-rich Low_complexity Low_complexity 1 94 0 709 259 135 71 chr2 118541930 118542227 -134714356 + L2 LINE L2 1997 2312 -1002 1226 273 13 13 chr2 118542245 118542623 -134713960 + MER68 LTR ERV1 1 378 -184 684 258 0 0 chr2 118542804 118542959 -134713624 + MER68 LTR ERV1 408 562 0 185 195 24 0 chr2 118542961 118543002 -134713581 + L2 LINE L2 2328 2369 -945 313 253 84 12 chr2 118543076 118543159 -134713424 + L2 LINE L2 2379 2467 -847 1791 198 55 23 chr2 118543162 118543546 -134713037 - MSTD LTR MaLR 0 396 1 6520 229 65 28 chr2 118543547 118543799 -134712784 - MSTD-int LTR MaLR -1 1734 1493 1835 150 0 46 chr2 118543799 118544105 -134712478 + AluJb SINE Alu 1 292 -20 6520 229 65 28 chr2 118544105 118545524 -134711059 - MSTD-int LTR MaLR -242 1493 2 864 202 29 4 chr2 118545526 118545873 -134710710 - MSTD LTR MaLR 0 396 1 690 272 168 55 chr2 118545876 118546442 -134710141 + L2 LINE L2 2472 3163 -150 1689 156 63 40 chr2 118546442 118546820 -134709763 + MLT1B LTR MaLR 4 390 0 690 272 168 55 chr2 118546820 118546990 -134709593 + L2 LINE L2 3163 3312 -1 1215 267 88 73 chr2 118547039 118547141 -134709442 + MLT1H LTR MaLR 1 100 -449 2275 117 0 7 chr2 118547141 118547450 -134709133 - AluSq SINE Alu -6 307 1 1215 267 88 73 chr2 118547450 118547883 -134708700 + MLT1H LTR MaLR 100 544 -5 531 270 89 21 chr2 118547941 118548145 -134708438 + MIR SINE MIR 2 218 -44 24 32 0 0 chr2 118548815 118548846 -134707737 + AT_rich Low_complexity Low_complexity 1 31 0 300 313 31 21 chr2 118549822 118549918 -134706665 - MIR3 SINE MIR -97 111 15 491 90 13 0 chr2 118550702 118550780 -134705803 + (TCTA)n Simple_repeat Simple_repeat 3 81 0 1894 133 3 72 chr2 118550783 118551115 -134705468 - AluSx SINE Alu -3 309 1 226 276 48 38 chr2 118551147 118551252 -134705331 - MLT1J LTR MaLR -321 190 85 18928 112 9 49 chr2 118552226 118555666 -134700917 + L1P LINE L1 386 3687 -2459 2384 113 0 0 chr2 118555767 118556077 -134700506 - AluSg SINE Alu 0 310 1 509 333 33 25 chr2 118556552 118556795 -134699788 - L3 LINE CR1 -1050 527 283 227 238 0 83 chr2 118557068 118557152 -134699431 - L2 LINE L2 -11 3261 3185 473 188 39 0 chr2 118557370 118557498 -134699085 - L1MA4 LINE L1 -6 6294 6162 22 70 0 0 chr2 118557958 118558001 -134698582 + AT_rich Low_complexity Low_complexity 1 43 0 217 196 20 20 chr2 118558271 118558322 -134698261 + (CATATA)n Simple_repeat Simple_repeat 4 54 0 215 317 204 32 chr2 118559428 118559649 -134696934 - L3 LINE CR1 -16 1561 1303 692 265 16 0 chr2 118559688 118559873 -134696710 + MER5A DNA MER1_type 2 189 0 239 337 20 87 chr2 118560303 118560499 -134696084 - MIR3 SINE MIR -6 202 20 2225 112 0 10 chr2 118560669 118560972 -134695611 + AluSq SINE Alu 1 300 -13 240 250 0 16 chr2 118561012 118561076 -134695507 + (TTTA)n Simple_repeat Simple_repeat 2 64 0 2419 67 0 0 chr2 118561113 118561410 -134695173 - AluY SINE Alu -14 297 1 621 200 48 35 chr2 118562462 118562607 -134693976 - MER58B DNA MER1_type 0 341 195 21 57 0 0 chr2 118564141 118564176 -134692407 + AT_rich Low_complexity Low_complexity 1 35 0 367 155 14 0 chr2 118564294 118564365 -134692218 - MER116 DNA Mariner -8 72 1 237 333 94 25 chr2 118564647 118564806 -134691777 - MIR SINE MIR -92 170 1 230 342 33 33 chr2 118564988 118565108 -134691475 - MER5A DNA MER1_type -26 163 44 25 65 0 0 chr2 118565164 118565210 -134691373 + AT_rich Low_complexity Low_complexity 1 46 0 499 121 143 11 chr2 118565216 118565307 -134691276 - U13 snRNA snRNA -1 103 1 242 303 101 37 chr2 118565313 118565422 -134691161 - MIR SINE MIR -62 146 31 38 75 0 0 chr2 118566722 118566802 -134689781 + AT_rich Low_complexity Low_complexity 1 80 0 4399 168 25 25 chr2 118568728 118569620 -134686963 - MER4D LTR ERV1 -11 892 1 7026 65 2 0 chr2 118570436 118571516 -134685067 + L1PA8 LINE L1 5090 6171 -1 381 261 65 0 chr2 118572433 118572525 -134684058 - MIR SINE MIR -79 183 86 294 297 36 27 chr2 118573312 118573423 -134683160 - MIR3 SINE MIR -11 197 86 323 326 26 11 chr2 118574496 118574686 -134681897 - MLT1I LTR MaLR -83 326 134 8090 26 0 0 chr2 118575360 118576355 -134680228 - L1PA4 LINE L1 -1216 4930 3936 6833 42 3 0 chr2 118576356 118577586 -134678997 + L1PA4 LINE L1 4942 6173 0 240 35 0 0 chr2 118578269 118578298 -134678285 + (CA)n Simple_repeat Simple_repeat 2 30 0 1037 155 26 5 chr2 118578301 118578494 -134678089 + MSTB1 LTR MaLR 236 432 0 496 214 0 0 chr2 118578649 118578738 -134677845 + MER5A DNA MER1_type 17 105 -84 1664 184 7 3 chr2 118579654 118579958 -134676625 + AluJb SINE Alu 1 305 -7 495 264 85 0 chr2 118580484 118580660 -134675923 - MIR SINE MIR -34 228 37 214 330 112 34 chr2 118581871 118582192 -134674391 + L2 LINE L2 2827 3172 -100 244 321 214 6 chr2 118582651 118582819 -134673764 + L2 LINE L2 1632 1834 -1480 347 183 0 24 chr2 118583016 118583098 -134673485 + GA-rich Low_complexity Low_complexity 4 83 0 1862 186 13 5 chr2 118584373 118584750 -134671833 - MLT1B LTR MaLR -10 380 1 211 379 48 29 chr2 118587910 118588116 -134668467 - L2 LINE L2 -576 2738 2529 744 316 27 9 chr2 118588646 118588871 -134667712 + MIR SINE MIR 25 253 -9 1936 137 3 26 chr2 118589533 118589846 -134666737 - AluY SINE Alu -5 306 1 325 132 0 0 chr2 118589853 118589906 -134666677 + MLT1E1 LTR MaLR 599 651 -3 16583 64 0 11 chr2 118590154 118592415 -134664168 + L1P LINE L1 3 2240 -3906 2234 148 10 8 chr2 118592516 118592901 -134663682 - L1P3 LINE L1 -6061 400 15 3943 232 33 34 chr2 118592903 118594633 -134661950 - L1MC/D LINE L1 -679 5957 4229 11870 158 24 12 chr2 118594666 118595070 -134661513 - L1 LINE L1 -1426 6139 5741 1977 157 0 0 chr2 118595070 118595351 -134661232 - AluSx SINE Alu -16 296 16 11870 158 24 12 chr2 118595351 118596638 -134659945 - L1 LINE L1 -1824 5741 4471 2386 66 30 7 chr2 118596638 118596941 -134659642 - AluY SINE Alu 0 311 2 198 0 0 0 chr2 118596941 118596963 -134659620 + (TTTTC)n Simple_repeat Simple_repeat 5 26 0 11870 158 24 12 chr2 118596963 118599389 -134657194 - L1 LINE L1 -3093 4472 1967 1655 200 37 50 chr2 118599389 118599945 -134656638 + MLT2A2 LTR ERVL 1 554 0 7209 109 45 11 chr2 118599945 118601096 -134655487 + HERVL-A2 LTR ERVL 1 1190 -4464 * 20847 104 10 2 chr2 118601089 118604092 -134652491 + HERVL-A2 LTR ERVL 1517 4542 -1112 25146 105 8 2 chr2 118604277 118607900 -134648683 + HERVL LTR ERVL 1976 5616 -38 2822 203 27 25 chr2 118607900 118608531 -134648052 - L1 LINE L1 -6921 644 13 282 95 0 0 chr2 118608581 118608623 -134647960 - 5S rRNA rRNA -79 42 1 446 275 58 0 chr2 118608623 118608794 -134647789 - L1MC/D LINE L1 -2678 3862 3682 2095 248 55 39 chr2 118608798 118609624 -134646959 - L1MDa LINE L1 -5370 1170 24 28 29 0 0 chr2 118610386 118610421 -134646162 + AT_rich Low_complexity Low_complexity 1 35 0 308 217 70 49 chr2 118610428 118610571 -134646012 - L1ME4a LINE L1 -24 6097 5952 455 294 130 57 chr2 118610738 118611177 -134645406 - L1ME4a LINE L1 -394 5727 5255 190 132 38 38 chr2 118611737 118611790 -134644793 + A-rich Low_complexity Low_complexity 2 54 0 246 283 17 25 chr2 118611821 118611941 -134644642 - L1ME4a LINE L1 -1563 4583 4465 21 0 0 0 chr2 118612517 118612538 -134644045 + AT_rich Low_complexity Low_complexity 1 21 0 352 257 75 102 chr2 118613137 118613402 -134643181 + HAL1 LINE L1 2249 2506 -1 293 274 0 0 chr2 118613517 118613579 -134643004 + L2 LINE L2 3210 3271 -1 339 297 0 0 chr2 118613835 118613946 -134642637 + C-rich Low_complexity Low_complexity 1 111 0 4916 167 42 14 chr2 118614090 118615839 -134640744 + L1MA7 LINE L1 4487 6291 0 2306 258 53 27 chr2 118615875 118617697 -134638886 + L1MC/D LINE L1 1414 3378 -3579 1297 263 92 5 chr2 118617710 118618090 -134638493 + MLT1D LTR MaLR 93 505 0 1973 221 36 10 chr2 118618095 118618303 -134638280 + L1MC/D LINE L1 4792 4993 -1964 2314 117 0 0 chr2 118618303 118618612 -134637971 + AluY SINE Alu 1 309 -2 1973 221 36 10 chr2 118618612 118618906 -134637677 + L1MC/D LINE L1 4993 5307 -1650 * 3519 163 30 62 chr2 118618883 118619670 -134636913 + L1MCa LINE L1 1 762 -5664 3007 116 45 13 chr2 118619673 118620225 -134636358 + L1MC/D LINE L1 5519 6088 -525 276 335 134 5 chr2 118620557 118620751 -134635832 - MIR SINE MIR -30 232 14 575 290 50 44 chr2 118620969 118621572 -134635011 - L1 LINE L1 -1923 4223 3624 22 0 0 0 chr2 118621781 118621803 -134634780 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr2 118622137 118622163 -134634420 + AT_rich Low_complexity Low_complexity 1 26 0 296 269 38 95 chr2 118622164 118622428 -134634155 - HAL1b LINE L1 -741 607 359 24 0 0 0 chr2 118623609 118623633 -134632950 + AT_rich Low_complexity Low_complexity 1 24 0 250 280 115 66 chr2 118623898 118624080 -134632503 - MIR SINE MIR -7 255 65 24 0 0 0 chr2 118624254 118624278 -134632305 + AT_rich Low_complexity Low_complexity 1 24 0 2183 110 0 7 chr2 118624286 118624578 -134632005 - AluSx SINE Alu -22 290 1 1487 129 5 0 chr2 118626184 118626386 -134630197 - AluSp SINE Alu -110 203 1 245 313 25 55 chr2 118627086 118627249 -134629334 - L3 LINE CR1 -103 1474 1317 303 307 21 50 chr2 118627443 118627583 -134629000 - L3 LINE CR1 -270 1307 1172 2723 138 14 0 chr2 118627989 118628410 -134628173 - MSTA LTR MaLR -1 427 1 17202 39 2 1 chr2 118628417 118630851 -134625732 + L1P2 LINE L1 3179 5616 -539 7177 30 19 7 chr2 118630966 118632584 -134623999 + L1PA4 LINE L1 4527 6155 0 903 90 0 23 chr2 118632733 118632866 -134623717 - Alu SINE Alu -12 298 169 1858 101 8 0 chr2 118633389 118633626 -134622957 - AluSq SINE Alu -74 239 1 226 276 48 38 chr2 118633658 118633763 -134622820 - MLT1J LTR MaLR -321 190 85 187 188 0 0 chr2 118635736 118635768 -134620815 + MIR SINE MIR 222 253 -9 529 262 113 7 chr2 118636309 118636450 -134620133 + MIR SINE MIR 107 262 0 1817 169 6 0 chr2 118636583 118636897 -134619686 - MLT1A1 LTR MaLR -1 364 49 651 283 112 53 chr2 118636904 118637396 -134619187 - L1ME4a LINE L1 -59 6062 5542 2215 177 120 2 chr2 118637951 118638402 -134618181 + MLT1D LTR MaLR 1 504 -1 2318 117 7 0 chr2 118638716 118639025 -134617558 + AluSq SINE Alu 1 311 -2 315 104 0 0 chr2 118639026 118639074 -134617509 + MER72 LTR ERV1 675 722 0 2398 184 8 6 chr2 118639154 118639660 -134616923 + L1MA9 LINE L1 5770 6276 -36 2038 137 64 19 chr2 118640839 118641198 -134615385 - THE1C LTR MaLR 0 375 1 312 280 37 28 chr2 118641978 118642085 -134614498 + L1MC4 LINE L1 7914 8021 -21 803 142 8 0 chr2 118642242 118642407 -134614176 - AluSg/x SINE Alu 0 329 164 5010 96 1 7 chr2 118642550 118643365 -134613218 + L1P LINE L1 2733 3543 -2598 5489 45 8 10 chr2 118643365 118644072 -134612511 + L1PA4 LINE L1 5449 6155 0 985 75 0 22 chr2 118644221 118644355 -134612228 - Alu SINE Alu -11 299 169 1870 97 8 0 chr2 118644873 118645110 -134611473 - AluSq SINE Alu -74 239 1 226 276 48 38 chr2 118645142 118645247 -134611336 - MLT1J LTR MaLR -321 190 85 599 207 48 35 chr2 118646834 118646979 -134609604 + MER58B DNA MER1_type 195 341 0 2605 48 0 6 chr2 118648030 118648343 -134608240 + AluY SINE Alu 1 311 0 558 297 94 28 chr2 118648505 118648555 -134608028 + HAL1 LINE L1 4 49 -2458 1266 215 68 49 chr2 118648555 118648922 -134607661 - MLT1A2 LTR MaLR 0 374 1 558 297 94 28 chr2 118648922 118649191 -134607392 + HAL1 LINE L1 49 344 -2163 628 295 55 9 chr2 118649336 118649661 -134606922 + HAL1 LINE L1 1009 1348 -1159 2184 129 17 0 chr2 118649663 118649957 -134606626 + AluSx SINE Alu 1 299 -13 200 302 35 12 chr2 118651606 118651692 -134604891 + MIR SINE MIR 77 164 -98 223 306 28 0 chr2 118651767 118651839 -134604744 + MIR3 SINE MIR 124 197 -11 1852 162 11 42 chr2 118652578 118652955 -134603628 + MLT1A1 LTR MaLR 1 365 0 226 170 38 19 chr2 118652983 118653036 -134603547 + CT-rich Low_complexity Low_complexity 3 56 0 628 183 83 0 chr2 118703359 118703479 -134553104 - MSTB LTR MaLR -296 130 1 305 205 51 0 chr2 118703479 118703556 -134553027 + Charlie2a DNA MER1_type 574 654 -2208 487 190 10 0 chr2 118703824 118703924 -134552659 + Charlie2a DNA MER1_type 976 1076 -1786 779 204 114 90 chr2 118703934 118704321 -134552262 + Charlie2a DNA MER1_type 1403 1798 -1064 272 301 64 35 chr2 118704652 118704825 -134551758 - L2 LINE L2 -2 3311 3134 205 229 29 29 chr2 118705327 118705432 -134551151 + A-rich Low_complexity Low_complexity 2 106 0 434 61 15 0 chr2 118705591 118705657 -134550926 + (TCTA)n Simple_repeat Simple_repeat 3 69 0 449 88 0 29 chr2 118705684 118705741 -134550842 + U2 snRNA snRNA 1 57 -131 228 67 0 0 chr2 118705741 118705771 -134550812 + (CCTA)n Simple_repeat Simple_repeat 1 30 0 2258 73 13 32 chr2 118707987 118708300 -134548283 + AluY SINE Alu 1 307 -4 2310 105 0 0 chr2 118709120 118709424 -134547159 + AluSc SINE Alu 1 304 -5 774 124 0 0 chr2 118709460 118709581 -134547002 + (TCC)n Simple_repeat Simple_repeat 3 123 0 213 250 59 0 chr2 118709996 118710064 -134546519 + (TATATG)n Simple_repeat Simple_repeat 4 75 0 1430 93 0 0 chr2 118711049 118711242 -134545341 + AluY SINE Alu 119 311 0 1302 223 68 47 chr2 118712114 118712496 -134544087 - MLT1B LTR MaLR 0 390 1 24 0 0 0 chr2 118712864 118712888 -134543695 + AT_rich Low_complexity Low_complexity 1 24 0 328 336 26 26 chr2 118713156 118713272 -134543311 + MIR SINE MIR 33 148 -114 182 328 133 16 chr2 118716272 118716400 -134540183 + MIR3 SINE MIR 16 158 -50 3630 208 97 29 chr2 118716488 118717504 -134539079 - Charlie1 DNA MER1_type -1 2760 1676 3202 247 87 82 chr2 118717538 118719220 -134537363 - HAL1 LINE L1 -805 1702 12 288 386 50 0 chr2 118719940 118720041 -134536542 + L2 LINE L2 3142 3247 -25 309 354 43 6 chr2 118720577 118720738 -134535845 + L2 LINE L2 1760 1926 -1388 205 225 163 50 chr2 118723096 118723176 -134533407 + MIR SINE MIR 4 92 -170 763 244 36 107 chr2 118723532 118723871 -134532712 + MLT1I LTR MaLR 45 356 -53 1880 167 3 3 chr2 118723871 118724177 -134532406 - AluSx SINE Alu -6 306 1 763 244 36 107 chr2 118724177 118724222 -134532361 + MLT1I LTR MaLR 356 403 -6 521 263 20 32 chr2 118726018 118726265 -134530318 - L1M4 LINE L1 -2980 3166 2923 22 35 0 0 chr2 118727030 118727059 -134529524 + AT_rich Low_complexity Low_complexity 1 29 0 363 127 0 0 chr2 118727881 118727944 -134528639 + (CAG)n Simple_repeat Simple_repeat 2 64 0 423 0 0 0 chr2 118730787 118730834 -134525749 + (TG)n Simple_repeat Simple_repeat 2 48 0 23 0 0 0 chr2 118732282 118732305 -134524278 + AT_rich Low_complexity Low_complexity 1 23 0 1865 77 0 0 chr2 118732314 118732547 -134524036 - AluSc SINE Alu -76 233 1 23 0 0 0 chr2 118732654 118732677 -134523906 + AT_rich Low_complexity Low_complexity 1 23 0 902 191 87 0 chr2 118733724 118733897 -134522686 + MER5A DNA MER1_type 2 189 0 292 309 0 11 chr2 118735672 118735766 -134520817 + L2 LINE L2 3220 3312 -1 256 313 15 0 chr2 118737720 118737787 -134518796 - MIR3 SINE MIR -38 170 103 316 265 40 80 chr2 118737887 118738087 -134518496 - MLT1L LTR MaLR -2 613 422 180 377 113 19 chr2 118739105 118739211 -134517372 - L2 LINE L2 -5 3267 3152 235 317 195 8 chr2 118739616 118739739 -134516844 - MIR SINE MIR -109 153 8 324 376 40 0 chr2 118740107 118740232 -134516351 + L2 LINE L2 3143 3272 0 279 0 0 0 chr2 118740410 118740441 -134516142 + (TG)n Simple_repeat Simple_repeat 2 32 0 2109 125 0 0 chr2 118740516 118740813 -134515770 + AluSx SINE Alu 1 297 -15 788 162 95 6 chr2 118742482 118742661 -134513922 - MER20 DNA MER1_type -2 217 23 496 337 50 5 chr2 118743789 118743991 -134512592 + MIR SINE MIR 2 212 -50 495 0 0 0 chr2 118745423 118745478 -134511105 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 183 305 12 12 chr2 118746954 118747036 -134509547 + MIR SINE MIR 66 147 -115 2684 203 58 19 chr2 118747429 118748148 -134508435 - L1MC3 LINE L1 -23 7762 7016 6357 215 41 15 chr2 118748152 118749853 -134506730 - L1MC3 LINE L1 -743 5403 5154 1075 166 0 0 chr2 118749968 118750143 -134506440 + AluSg/x SINE Alu 131 305 -5 568 343 74 5 chr2 118750340 118750556 -134506027 + MIR SINE MIR 25 255 -7 1810 169 26 0 chr2 118750956 118751306 -134505277 - L1MA5 LINE L1 -2 6298 5940 245 253 0 23 chr2 118751307 118751394 -134505189 + L1M4 LINE L1 4531 4615 -1531 298 239 22 11 chr2 118751545 118751637 -134504946 + (TATATG)n Simple_repeat Simple_repeat 3 95 0 750 236 35 81 chr2 118751683 118751942 -134504641 + MIR SINE MIR 5 251 -11 1631 166 37 14 chr2 118752015 118752311 -134504272 + AluSx SINE Alu 1 303 -9 306 292 71 30 chr2 118752488 118752743 -134503840 - MER102a DNA MER1_type -1 329 35 1336 186 44 11 chr2 118752971 118753087 -134503496 + AluJo SINE Alu 1 112 -199 213 65 0 0 chr2 118753087 118753118 -134503465 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 1336 186 44 11 chr2 118753118 118753303 -134503280 + AluJo SINE Alu 112 311 0 278 292 185 0 chr2 118753339 118753469 -134503114 - MIR SINE MIR -34 228 75 216 0 0 0 chr2 118753651 118753675 -134502908 + (A)n Simple_repeat Simple_repeat 1 24 0 23 0 0 0 chr2 118754676 118754699 -134501884 + AT_rich Low_complexity Low_complexity 1 23 0 2011 133 10 0 chr2 118754702 118754995 -134501588 + AluSx SINE Alu 1 296 -16 328 249 75 7 chr2 118757208 118757412 -134499171 - MER67D LTR ERV1 0 543 285 * 1066 216 41 18 chr2 118757393 118757775 -134498808 - MER67B LTR ERV1 -254 407 121 410 300 33 78 chr2 118758755 118759063 -134497520 + L1ME4a LINE L1 5614 5907 -214 257 156 0 31 chr2 118759089 118759153 -134497430 + (CATA)n Simple_repeat Simple_repeat 2 63 0 2070 123 7 7 chr2 118759200 118759508 -134497075 - AluSg SINE Alu -2 308 1 403 269 88 38 chr2 118760770 118760930 -134495653 + MER5A DNA MER1_type 21 188 -1 1005 221 69 33 chr2 118761977 118762217 -134494366 - L1ME3A LINE L1 0 6170 5909 1981 139 7 3 chr2 118762217 118762512 -134494071 - AluSx SINE Alu -16 296 1 1005 221 69 33 chr2 118762512 118762664 -134493919 - L1ME3A LINE L1 -261 5909 5764 225 318 0 0 chr2 118762712 118762800 -134493783 - L1MC4 LINE L1 -1342 6700 6613 1040 96 7 0 chr2 118762815 118762951 -134493632 + AluSx SINE Alu 58 194 -118 236 253 0 22 chr2 118762969 118763060 -134493523 - L1MC4 LINE L1 -1339 6703 6615 343 273 23 0 chr2 118763083 118763171 -134493412 + L1MC4 LINE L1 6614 6703 -1339 441 198 0 0 chr2 118763174 118763265 -134493318 + (TA)n Simple_repeat Simple_repeat 2 92 0 1711 274 58 39 chr2 118763324 118764200 -134492383 + L1M4 LINE L1 3622 4514 -1632 346 256 67 0 chr2 118764212 118764302 -134492281 + L1M4 LINE L1 4419 4514 -1632 935 254 117 5 chr2 118764314 118764759 -134491824 + L1M4 LINE L1 4419 4913 -1233 772 144 43 5 chr2 118764765 118764953 -134491630 + L1P LINE L1 4788 4982 -1164 973 201 42 9 chr2 118765653 118765867 -134490716 - MIR SINE MIR -26 236 16 290 350 17 17 chr2 118765902 118766022 -134490561 + L2 LINE L2 2911 3030 -242 418 343 93 5 chr2 118767424 118767628 -134488955 + MIR SINE MIR 1 222 -40 2074 129 0 13 chr2 118767878 118768189 -134488394 - AluSq SINE Alu -2 311 5 335 270 157 29 chr2 118769184 118769388 -134487195 - L2 LINE L2 -4 3309 3080 275 300 57 36 chr2 118769676 118769816 -134486767 + MIR3 SINE MIR 33 175 -33 570 330 52 8 chr2 118770625 118770892 -134485691 - L2 LINE L2 -15 3298 3020 386 300 36 7 chr2 118770892 118771032 -134485551 - L2 LINE L2 -1 3312 3169 1078 284 115 83 chr2 118771250 118771573 -134485010 - L2 LINE L2 -427 2887 2576 330 26 0 0 chr2 118771573 118771612 -134484971 + (TA)n Simple_repeat Simple_repeat 1 39 0 1078 284 115 83 chr2 118771612 118772425 -134484158 - L2 LINE L2 -738 2576 1714 645 339 160 15 chr2 118773636 118774037 -134482546 + L2 LINE L2 2850 3308 -5 226 303 30 0 chr2 118774168 118774234 -134482349 + L2 LINE L2 3246 3313 0 2224 203 72 6 chr2 118774439 118774913 -134481670 + MLT1D LTR MaLR 1 505 0 243 217 0 0 chr2 118775219 118775279 -134481304 + A-rich Low_complexity Low_complexity 1 60 0 26 0 0 0 chr2 118775656 118775682 -134480901 + AT_rich Low_complexity Low_complexity 1 26 0 316 217 31 8 chr2 118776715 118776844 -134479739 + (CA)n Simple_repeat Simple_repeat 1 132 0 2288 108 0 0 chr2 118778433 118778728 -134477855 + AluSc SINE Alu 1 295 -14 235 287 17 43 chr2 118780000 118780115 -134476468 + GA-rich Low_complexity Low_complexity 3 114 0 21 0 0 0 chr2 118780278 118780299 -134476284 + AT_rich Low_complexity Low_complexity 1 21 0 200 382 0 0 chr2 118780617 118780672 -134475911 + L2 LINE L2 3210 3264 -8 255 288 36 54 chr2 118781040 118781151 -134475432 + MIR SINE MIR 39 147 -115 238 244 0 0 chr2 118781147 118781192 -134475391 - L2 LINE L2 -17 3255 3211 * 261 0 0 0 chr2 118781218 118781247 -134475336 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 352 286 93 77 chr2 118781254 118781436 -134475147 - L2 LINE L2 -21 3292 3108 190 296 42 0 chr2 118781534 118781605 -134474978 - L2 LINE L2 -316 2997 2924 492 250 28 0 chr2 118781702 118781846 -134474737 - L1MD3 LINE L1 -5 7990 7843 300 206 0 0 chr2 118781864 118781927 -134474656 - L1MD3 LINE L1 -203 7792 7730 447 293 58 35 chr2 118782066 118782240 -134474343 + MIR3 SINE MIR 16 193 -15 201 212 167 0 chr2 118782478 118782544 -134474039 - MIR SINE MIR -38 224 148 1233 157 83 113 chr2 118782559 118782922 -134473661 + MLT1D LTR MaLR 3 354 -151 2016 107 16 7 chr2 118783064 118783373 -134473210 + L1PA10 LINE L1 5854 6165 -3 181 406 0 0 chr2 118783410 118783474 -134473109 - MIR SINE MIR -165 97 34 900 177 49 5 chr2 118783505 118783708 -134472875 - L1MA4A LINE L1 0 6303 6092 333 47 0 0 chr2 118783709 118783752 -134472831 + L1MA4 LINE L1 5848 5890 -410 291 221 44 9 chr2 118785185 118785298 -134471285 + (TCTA)n Simple_repeat Simple_repeat 3 119 0 198 260 0 20 chr2 118785603 118785653 -134470930 + MIR3 SINE MIR 13 61 -147 320 242 86 108 chr2 118785816 118785886 -134470697 + L3 LINE CR1 1120 1190 -387 2471 66 0 25 chr2 118785886 118786203 -134470380 + AluY SINE Alu 1 309 -2 320 242 86 108 chr2 118786203 118786318 -134470265 + L3 LINE CR1 1190 1301 -276 2437 132 41 19 chr2 118786444 118786862 -134469721 + MSTA LTR MaLR 1 427 -1 393 322 25 55 chr2 118786894 118787093 -134469490 + L3 LINE CR1 1292 1484 -93 22 35 0 0 chr2 118787114 118787143 -134469440 + AT_rich Low_complexity Low_complexity 1 29 0 270 131 62 40 chr2 118787157 118787333 -134469250 + (TA)n Simple_repeat Simple_repeat 1 180 0 330 283 139 17 chr2 118788036 118788209 -134468374 - MIR SINE MIR -6 256 63 1498 229 3 7 chr2 118788322 118788624 -134467959 - AluJo SINE Alu -9 303 3 590 282 84 102 chr2 118791486 118791986 -134464597 - LTR33 LTR ERVL -8 513 23 195 42 0 0 chr2 118791986 118792010 -134464573 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 416 254 203 0 chr2 118792534 118792652 -134463931 - MIR SINE MIR -62 200 59 180 0 0 0 chr2 118792664 118792684 -134463899 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2215 183 71 7 chr2 118792959 118793396 -134463187 - MLT1C LTR MaLR 0 467 3 192 295 0 64 chr2 118794387 118794465 -134462118 - L2 LINE L2 -1 3312 3240 240 368 44 59 chr2 118795944 118796148 -134460435 + L2 LINE L2 2606 2806 -508 2432 62 10 13 chr2 118796514 118796823 -134459760 - AluY SINE Alu -3 308 1 766 238 45 31 chr2 118796825 118797115 -134459468 + LTR37A LTR ERV1 133 426 0 5311 161 30 6 chr2 118797144 118798153 -134458430 - L1MC1 LINE L1 -18 6315 5283 262 143 20 20 chr2 118798179 118798228 -134458355 - MER5B DNA MER1_type -8 170 122 429 223 117 0 chr2 118798271 118798374 -134458209 - MER5A DNA MER1_type -31 158 44 202 224 118 40 chr2 118798317 118798393 -134458190 + MER5A DNA MER1_type 103 184 -5 * 213 39 0 0 chr2 118799719 118799745 -134456838 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 2094 47 0 0 chr2 118799745 118800003 -134456580 - L1PA4 LINE L1 -10 6145 5888 1924 228 90 31 chr2 118800342 118800930 -134455653 - MLT1E3 LTR MaLR 0 624 2 1757 172 3 14 chr2 118801306 118801596 -134454987 + AluJb SINE Alu 1 287 -25 417 265 132 21 chr2 118801718 118801907 -134454676 + MIR SINE MIR 40 249 -13 2142 149 32 61 chr2 118801957 118802356 -134454227 + MSTB1 LTR MaLR 1 410 -22 2414 72 7 16 chr2 118802356 118802662 -134453921 + AluSp SINE Alu 1 303 -10 237 108 0 0 chr2 118802663 118802700 -134453883 + (CA)n Simple_repeat Simple_repeat 2 38 0 2142 149 32 61 chr2 118802700 118802740 -134453843 + MSTB1 LTR MaLR 409 429 -3 246 288 62 58 chr2 118803531 118803774 -134452809 + L1MD1 LINE L1 5648 5891 -230 1277 115 53 0 chr2 118803777 118803986 -134452597 + L1MA5A LINE L1 6074 6293 -4 3496 224 19 15 chr2 118805372 118806297 -134450286 + MER63C DNA MER1_type 2 930 0 7385 32 10 1 chr2 118807171 118808507 -134448076 + L1PA4 LINE L1 4800 6155 0 1176 249 122 3 chr2 118808532 118809341 -134447242 + L1MB5 LINE L1 4906 5903 -271 739 164 67 46 chr2 118809341 118809536 -134447047 - THE1C LTR MaLR 0 375 177 291 110 49 24 chr2 118809545 118809627 -134446956 + GA-rich Low_complexity Low_complexity 1 84 0 674 167 180 16 chr2 118809630 118809813 -134446770 - THE1C LTR MaLR -147 208 1 478 189 63 8 chr2 118809813 118809940 -134446643 + L1MD1 LINE L1 5899 6032 -210 276 197 61 0 chr2 118810070 118810136 -134446447 - MLT1H LTR MaLR -1 548 479 311 239 90 95 chr2 118811429 118811651 -134444932 + MER102a DNA MER1_type 109 329 -1 292 326 0 0 chr2 118812250 118812342 -134444241 + MER5A DNA MER1_type 19 110 -79 877 173 166 95 chr2 118812822 118813285 -134443298 - LTR54B LTR ERV1 -2 496 1 225 217 14 29 chr2 118813318 118813387 -134443196 + CT-rich Low_complexity Low_complexity 3 70 0 28 0 0 0 chr2 118814041 118814069 -134442514 + AT_rich Low_complexity Low_complexity 1 28 0 554 304 76 13 chr2 118815853 118816077 -134440506 + MIR SINE MIR 7 244 -18 289 261 70 56 chr2 118816140 118816282 -134440301 + MER103 DNA DNA 8 151 -15 405 272 200 0 chr2 118817458 118817638 -134438945 + MIR SINE MIR 47 262 0 209 268 0 28 chr2 118818353 118818424 -134438159 + MIR SINE MIR 77 145 -117 30 27 0 0 chr2 118819793 118819830 -134436753 + AT_rich Low_complexity Low_complexity 1 37 0 24 0 0 0 chr2 118820253 118820277 -134436306 + AT_rich Low_complexity Low_complexity 1 24 0 420 299 49 21 chr2 118820483 118820627 -134435956 - L2 LINE L2 -5 3308 3161 276 263 91 40 chr2 118820796 118820895 -134435688 + MIR SINE MIR 2 105 -157 278 239 239 26 chr2 118821468 118821581 -134435002 + MIR3 SINE MIR 2 138 -70 180 0 0 0 chr2 118821736 118821756 -134434827 + (A)n Simple_repeat Simple_repeat 1 20 0 1084 205 49 5 chr2 118821777 118822001 -134434582 + MIR SINE MIR 11 244 -18 497 276 134 49 chr2 118823629 118823973 -134432610 - LTR50 LTR ERVL 0 795 423 1787 161 28 44 chr2 118823978 118824348 -134432235 - MLT1A1 LTR MaLR -3 454 1 315 227 173 27 chr2 118824425 118824535 -134432048 - LTR50 LTR ERVL -505 290 165 231 225 14 0 chr2 118824626 118824697 -134431886 + L1MC4 LINE L1 6632 6703 -1339 295 173 25 25 chr2 118824697 118824778 -134431805 + (CATATA)n Simple_repeat Simple_repeat 6 86 0 377 257 35 12 chr2 118824794 118824965 -134431618 + (TATATG)n Simple_repeat Simple_repeat 2 176 0 296 100 0 0 chr2 118824965 118825005 -134431578 + (CATATA)n Simple_repeat Simple_repeat 6 45 0 228 304 36 0 chr2 118825006 118825118 -134431465 + L1MC4 LINE L1 6615 6730 -1312 312 331 89 6 chr2 118825249 118825406 -134431177 - MIR SINE MIR -70 192 23 1752 152 32 35 chr2 118825673 118826047 -134430536 - L1MA7 LINE L1 -6 6285 5913 1276 157 15 27 chr2 118826048 118826086 -134430497 + L1MA7 LINE L1 5651 5688 -603 1437 231 46 31 chr2 118826086 118826476 -134430107 - MSTD LTR MaLR 0 396 1 1276 157 15 27 chr2 118826476 118826698 -134429885 + L1MA7 LINE L1 5688 5908 -383 275 340 73 73 chr2 118827585 118827844 -134428739 + L2 LINE L2 2989 3247 -25 216 0 0 0 chr2 118828298 118828322 -134428261 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 471 328 69 28 chr2 118828730 118828977 -134427606 + MIR SINE MIR 3 259 -3 29 0 0 0 chr2 118829040 118829069 -134427514 + AT_rich Low_complexity Low_complexity 1 29 0 2155 103 3 63 chr2 118829567 118829886 -134426697 - AluSg SINE Alu -10 300 1 213 219 0 0 chr2 118830606 118830647 -134425936 + (TG)n Simple_repeat Simple_repeat 1 41 0 1404 218 20 126 chr2 118832339 118832405 -134424178 - MER34 LTR ERV1 -9 533 462 2377 104 0 0 chr2 118832405 118832713 -134423870 + AluSg SINE Alu 1 308 -2 1404 218 20 126 chr2 118832713 118833242 -134423341 - MER34 LTR ERV1 -80 462 1 324 314 85 0 chr2 118833242 118833395 -134423188 - MIR SINE MIR -89 173 8 896 194 74 105 chr2 118833652 118834348 -134422235 + LTR1 LTR ERV1 1 745 -81 1972 169 0 3 chr2 118834669 118834982 -134421601 - AluJb SINE Alu 0 312 1 676 304 37 12 chr2 118835285 118835528 -134421055 + MIR SINE MIR 12 260 -2 350 241 9 0 chr2 118835614 118835722 -134420861 + CT-rich Low_complexity Low_complexity 3 111 0 1661 266 29 2 chr2 118835723 118836207 -134420376 - L1ME1 LINE L1 -2 6164 5668 333 109 0 0 chr2 118836626 118836681 -134419902 + (GA)n Simple_repeat Simple_repeat 1 55 0 185 373 124 0 chr2 118837803 118837956 -134418627 + MIR SINE MIR 23 194 -68 2256 112 3 0 chr2 118837958 118838262 -134418321 + AluSg SINE Alu 3 307 -3 229 232 58 14 chr2 118838275 118838344 -134418239 + MIR SINE MIR 185 256 -6 245 260 0 0 chr2 118838743 118838816 -134417767 + (TA)n Simple_repeat Simple_repeat 2 74 0 180 216 0 27 chr2 118840137 118840174 -134416409 + MIR SINE MIR 117 152 -56 186 276 0 0 chr2 118840634 118840692 -134415891 + GA-rich Low_complexity Low_complexity 1 58 0 2447 85 7 0 chr2 118840873 118841180 -134415403 + AluSq SINE Alu 1 309 -4 287 104 21 0 chr2 118841234 118841282 -134415301 + (GAAA)n Simple_repeat Simple_repeat 3 51 0 339 286 19 0 chr2 118841863 118841968 -134414615 - MIR SINE MIR -58 204 98 212 179 0 0 chr2 118842389 118842428 -134414155 + T-rich Low_complexity Low_complexity 1 39 0 189 290 80 60 chr2 118842899 118842999 -134413584 - L3 LINE CR1 -11 1566 1465 185 150 0 25 chr2 118843337 118843377 -134413206 + (TTC)n Simple_repeat Simple_repeat 3 41 0 900 191 56 6 chr2 118843624 118843802 -134412781 - MER5A DNA MER1_type -2 187 1 2302 97 3 7 chr2 118844871 118845171 -134411412 + AluSx SINE Alu 1 299 -13 2112 149 3 0 chr2 118845702 118846010 -134410573 - AluSx SINE Alu -3 309 1 403 252 200 0 chr2 118846245 118846400 -134410183 + MER5A DNA MER1_type 4 189 0 239 240 0 68 chr2 118846437 118846510 -134410073 + MIR SINE MIR 56 122 -95 224 175 0 0 chr2 118847910 118847950 -134408633 + L2 LINE L2 3272 3311 -2 357 62 0 0 chr2 118848873 118848921 -134407662 + (CA)n Simple_repeat Simple_repeat 1 48 0 448 275 96 32 chr2 118849044 118849295 -134407288 + HAL1b LINE L1 21 287 -1061 392 244 144 75 chr2 118849343 118849437 -134407146 + HAL1b LINE L1 397 483 -865 1509 24 0 0 chr2 118849437 118849607 -134406976 - AluY SINE Alu -9 302 133 2701 16 0 16 chr2 118849607 118849916 -134406667 - AluYa5 SINE Alu -7 304 1 392 244 144 75 chr2 118849916 118850180 -134406403 + HAL1b LINE L1 482 781 -567 24 32 0 0 chr2 118850194 118850225 -134406358 + AT_rich Low_complexity Low_complexity 1 31 0 2016 129 53 36 chr2 118850296 118850652 -134405931 - THE1B LTR MaLR 0 364 3 1249 245 65 45 chr2 118850658 118851103 -134405480 - LTR16A1 LTR ERVL 0 457 4 210 359 75 25 chr2 118851788 118851947 -134404636 - L2 LINE L2 -567 2747 2581 * 315 301 182 13 chr2 118851925 118852161 -134404422 - L3 LINE CR1 -11 1566 1291 247 365 48 10 chr2 118852185 118852289 -134404294 - L2 LINE L2 -36 3236 3129 267 317 43 37 chr2 118852470 118852634 -134403949 - L3 LINE CR1 -376 1201 1037 477 294 137 15 chr2 118853068 118853272 -134403311 - MIR SINE MIR -1 261 33 340 329 105 13 chr2 118853253 118853405 -134403178 + MIR3 SINE MIR 40 205 -3 * 1731 181 12 18 chr2 118854162 118854504 -134402079 - MLT1A1 LTR MaLR -16 349 10 2170 152 12 0 chr2 118855279 118855622 -134400961 - MER7A DNA MER2_type -1 345 1 449 323 102 33 chr2 118856952 118857255 -134399328 + L2 LINE L2 2653 2976 -338 2668 75 8 6 chr2 118857317 118857678 -134398905 - L1PA12 LINE L1 -7 6161 5800 22 35 0 0 chr2 118858422 118858451 -134398132 + AT_rich Low_complexity Low_complexity 1 29 0 203 306 0 0 chr2 118858778 118858827 -134397756 - L2 LINE L2 -18 3254 3206 204 91 61 0 chr2 118859035 118859068 -134397515 + GA-rich Low_complexity Low_complexity 1 35 0 324 184 18 9 chr2 118859100 118859214 -134397369 + (TA)n Simple_repeat Simple_repeat 2 116 0 322 63 0 79 chr2 118859241 118859304 -134397279 + MLT2C1 LTR ERVL 349 397 0 2312 205 28 2 chr2 118859441 118859909 -134396674 + MLT2B1 LTR ERVL 1 480 -40 239 211 0 63 chr2 118859913 118860008 -134396575 - L1MC4 LINE L1 -1339 6703 6615 777 234 97 40 chr2 118860910 118860961 -134395622 - HAL1 LINE L1 -719 1788 1741 185 62 0 31 chr2 118860961 118860993 -134395590 + (TTA)n Simple_repeat Simple_repeat 3 33 0 777 234 97 40 chr2 118860993 118861033 -134395550 - HAL1 LINE L1 -766 1741 1705 1760 72 8 0 chr2 118861033 118861270 -134395313 + L1PA10 LINE L1 5930 6168 0 777 234 97 40 chr2 118861270 118861476 -134395107 - HAL1 LINE L1 -802 1705 1473 1523 274 117 72 chr2 118861506 118862811 -134393772 - HAL1 LINE L1 -1139 1368 6 274 339 71 63 chr2 118863164 118863732 -134392851 + L2 LINE L2 2521 3089 -183 2387 100 0 0 chr2 118864026 118864337 -134392246 - AluY SINE Alu 0 311 1 356 322 0 65 chr2 118865251 118865450 -134391133 - MIR SINE MIR -29 233 48 434 273 68 8 chr2 118865977 118866109 -134390474 - MIR3 SINE MIR -15 193 54 244 280 0 20 chr2 118866245 118866345 -134390238 - MLT1I LTR MaLR 0 409 312 227 305 134 0 chr2 118866668 118866750 -134389833 + L2 LINE L2 2620 2712 -602 375 221 51 0 chr2 118866757 118866915 -134389668 + (TA)n Simple_repeat Simple_repeat 1 166 0 192 152 0 0 chr2 118866938 118866971 -134389612 + (CATATA)n Simple_repeat Simple_repeat 2 34 0 312 339 0 9 chr2 118867267 118867382 -134389201 + L2 LINE L2 3199 3312 -1 184 167 93 19 chr2 118867601 118867655 -134388928 + L2 LINE L2 1631 1688 -1626 2244 129 0 0 chr2 118869667 118869978 -134386605 - AluSx SINE Alu -1 311 1 214 303 114 53 chr2 118870201 118870333 -134386250 + MIR SINE MIR 8 147 -115 646 321 28 52 chr2 118871575 118871939 -134384644 - L2 LINE L2 0 3313 2959 26 50 0 0 chr2 118872274 118872314 -134384269 + AT_rich Low_complexity Low_complexity 1 40 0 23 0 0 0 chr2 118872376 118872399 -134384184 + AT_rich Low_complexity Low_complexity 1 23 0 2215 107 0 0 chr2 118872490 118872780 -134383803 - AluSc SINE Alu -19 290 1 32 106 0 0 chr2 118872783 118872906 -134383677 + AT_rich Low_complexity Low_complexity 1 123 0 450 154 29 10 chr2 118872906 118873010 -134383573 + Charlie5 DNA MER1_type 2519 2624 0 23 0 0 0 chr2 118873392 118873415 -134383168 + AT_rich Low_complexity Low_complexity 1 23 0 2333 151 48 10 chr2 118873739 118874151 -134382432 - MSTA LTR MaLR 0 428 1 239 284 90 0 chr2 118874628 118874695 -134381888 + MIR SINE MIR 14 86 -176 587 257 106 18 chr2 118874715 118874933 -134381650 + MER45C DNA AcHobo 29 265 -688 466 197 17 13 chr2 118875005 118875162 -134381421 + MER45C DNA AcHobo 770 952 -1 217 269 30 0 chr2 118875250 118875317 -134381266 + (TATG)n Simple_repeat Simple_repeat 4 72 0 456 316 36 8 chr2 118875483 118875733 -134380850 - LTR33 LTR ERVL -264 257 1 2129 132 0 0 chr2 118877012 118877315 -134379268 + AluSg SINE Alu 3 305 -5 2229 103 20 0 chr2 118877700 118877992 -134378591 - AluSg SINE Alu -12 298 1 25 0 0 0 chr2 118879720 118879745 -134376838 + AT_rich Low_complexity Low_complexity 1 25 0 432 42 0 14 chr2 118879745 118879816 -134376767 - L1MA7 LINE L1 0 6291 6222 2824 62 21 8 chr2 118880128 118880512 -134376071 + MLT2A1 LTR ERVL 1 389 -55 189 107 0 0 chr2 118880512 118880540 -134376043 + (TA)n Simple_repeat Simple_repeat 1 28 0 223 140 40 0 chr2 118880623 118880673 -134375910 + (TA)n Simple_repeat Simple_repeat 1 52 0 325 218 10 69 chr2 118880675 118880776 -134375807 - L1MC4 LINE L1 -1334 6708 6614 455 274 101 21 chr2 118882746 118882983 -134373600 - MIR SINE MIR 0 262 4 345 257 96 37 chr2 118883035 118883171 -134373412 - L2 LINE L2 -8 3305 3162 200 320 86 23 chr2 118883414 118883542 -134373041 - L2 LINE L2 -457 2857 2722 360 370 43 30 chr2 118884586 118884886 -134371697 - L2 LINE L2 -1124 2190 1887 927 249 51 60 chr2 118885390 118885859 -134370724 - L1ME2 LINE L1 -19 6079 5615 438 277 49 62 chr2 118885866 118886090 -134370493 - L1ME2 LINE L1 -1052 5028 4808 820 254 49 49 chr2 118886106 118886698 -134369885 - L1ME2 LINE L1 -4821 1259 678 222 128 0 0 chr2 118888462 118888501 -134368082 + (TG)n Simple_repeat Simple_repeat 2 40 0 202 293 80 0 chr2 118889324 118889399 -134367184 - MIR SINE MIR -26 236 156 346 369 86 9 chr2 118889453 118889686 -134366897 + MIR SINE MIR 5 255 -7 2641 189 55 13 chr2 118889980 118890508 -134366075 - MER68 LTR ERV1 -1 561 12 2345 174 16 23 chr2 118891397 118891834 -134364749 + Tigger2a DNA MER2_type 1 434 0 185 189 94 0 chr2 118894641 118894694 -134361889 - MIR SINE MIR -56 206 149 2754 154 35 6 chr2 118894719 118895207 -134361376 + L1PA16 LINE L1 5663 6164 -2 285 304 19 53 chr2 118895701 118895862 -134360721 - MIR SINE MIR -41 167 12 257 239 42 0 chr2 118896226 118896297 -134360286 - MIR SINE MIR -86 176 103 300 285 3 13 chr2 118896398 118896489 -134360094 + MER5B DNA MER1_type 5 105 -84 329 315 7 62 chr2 118896583 118896729 -134359854 + L3 LINE CR1 966 1103 -474 290 232 0 62 chr2 118897533 118897645 -134358938 - L1ME4a LINE L1 -50 6071 5967 193 277 0 0 chr2 118898863 118898910 -134357673 + MIR SINE MIR 47 93 -169 194 342 13 13 chr2 118899208 118899284 -134357299 + L2 LINE L2 3193 3268 -4 244 337 21 0 chr2 118899467 118899562 -134357021 - MIR SINE MIR -62 146 50 5534 61 3 7 chr2 118899568 118900296 -134356287 + L1PA8 LINE L1 5448 6172 0 22 0 0 0 chr2 118900420 118900442 -134356141 + AT_rich Low_complexity Low_complexity 1 22 0 278 350 0 44 chr2 118901744 118901881 -134354702 + MIR3 SINE MIR 26 156 -52 223 316 0 18 chr2 118901974 118902031 -134354552 - L2 LINE L2 -17 3255 3200 299 296 0 62 chr2 118902352 118902528 -134354055 + MLT1H LTR MaLR 59 223 -326 345 289 98 36 chr2 118902826 118903506 -134353077 + L1MC5 LINE L1 7190 7740 -221 21 36 0 0 chr2 118904752 118904780 -134351803 + AT_rich Low_complexity Low_complexity 1 28 0 309 151 0 0 chr2 118905506 118905559 -134351024 + (TG)n Simple_repeat Simple_repeat 2 54 0 188 33 0 33 chr2 118905759 118905789 -134350794 + (TAAAA)n Simple_repeat Simple_repeat 5 33 0 284 350 31 0 chr2 118907587 118907684 -134348899 - MIR SINE MIR -152 110 11 210 361 10 0 chr2 118907909 118908006 -134348577 - L3b LINE CR1 -150 1433 1336 219 286 123 64 chr2 118908314 118908485 -134348098 - MIR SINE MIR -6 256 76 194 108 54 0 chr2 118908516 118908553 -134348030 + (TCCA)n Simple_repeat Simple_repeat 3 41 0 253 408 13 6 chr2 118908830 118908987 -134347596 + MLT1K LTR MaLR 275 432 -156 475 277 43 7 chr2 118910090 118910231 -134346352 + MIR SINE MIR 117 262 0 302 369 50 25 chr2 118910254 118910452 -134346131 - L2 LINE L2 -173 3099 2897 2592 241 94 48 chr2 118910980 118912485 -134344098 - L1MC5 LINE L1 -104 7857 6275 328 271 47 42 chr2 118913009 118913201 -134343382 - L1ME4a LINE L1 -233 5888 5696 26 30 0 0 chr2 118914591 118914624 -134341959 + AT_rich Low_complexity Low_complexity 1 33 0 246 204 0 19 chr2 118915219 118915273 -134341310 - MER5B DNA MER1_type -125 53 1 551 311 100 44 chr2 118915642 118916339 -134340244 + L1ME4a LINE L1 5354 6100 -21 296 254 62 18 chr2 118918054 118918230 -134338353 - L1MC4 LINE L1 -408 7634 7350 1244 276 66 38 chr2 118918381 118918650 -134337933 - L1MC4 LINE L1 -724 7318 7058 2514 75 0 0 chr2 118918650 118918958 -134337625 - AluY SINE Alu -3 308 1 1244 276 66 38 chr2 118918958 118919292 -134337291 - L1MC4 LINE L1 -984 7058 6698 2214 118 3 10 chr2 118919386 118919700 -134336883 - AluSx SINE Alu 0 312 1 1919 155 7 7 chr2 118919751 118920061 -134336522 - AluSx SINE Alu -2 310 1 329 254 76 0 chr2 118920382 118920500 -134336083 - L1MC4a LINE L1 -1632 6176 6050 268 255 104 28 chr2 118920568 118920674 -134335909 - MIR SINE MIR -140 122 9 560 330 47 9 chr2 118920686 118920919 -134335664 + MIR SINE MIR 21 262 0 791 203 45 9 chr2 118921809 118922031 -134334552 - Charlie1a DNA MER1_type 0 1455 1226 * 2746 231 77 12 chr2 118922015 118922759 -134333824 - Charlie1a DNA MER1_type -663 792 1 22 0 0 0 chr2 118923353 118923375 -134333208 + AT_rich Low_complexity Low_complexity 1 22 0 3984 209 11 2 chr2 118923609 118924467 -134332116 - L1PA16 LINE L1 -971 5175 4311 * 5054 142 30 22 chr2 118924458 118925216 -134331367 + L1PA16 LINE L1 5164 5931 -235 2626 111 8 0 chr2 118925216 118925577 -134331006 - THE1B LTR MaLR 0 364 1 5054 142 30 22 chr2 118925577 118925806 -134330777 + L1PA16 LINE L1 5931 6157 -9 390 322 59 7 chr2 118927188 118927340 -134329243 - MIR SINE MIR -31 231 72 293 311 81 12 chr2 118928394 118928555 -134328028 - MIR SINE MIR -71 191 20 183 225 0 0 chr2 118928963 118929003 -134327580 - MIR SINE MIR -137 71 32 378 129 0 0 chr2 118930006 118930068 -134326515 + (TG)n Simple_repeat Simple_repeat 2 63 0 2245 92 0 29 chr2 118930083 118930389 -134326194 - AluSg SINE Alu -13 297 1 357 43 0 0 chr2 118930480 118930527 -134326056 + (TG)n Simple_repeat Simple_repeat 2 48 0 284 231 26 13 chr2 118930709 118930787 -134325796 + MER5B DNA MER1_type 89 167 -11 2128 94 4 0 chr2 118932040 118932346 -134324237 + AluSg SINE Alu 13 319 0 261 331 120 23 chr2 118933065 118933198 -134323385 - MIR3 SINE MIR -59 149 4 1264 203 22 89 chr2 118934102 118934516 -134322067 + LTR40b LTR ERVL 77 462 0 517 292 6 39 chr2 118935382 118935493 -134321090 - MER5B DNA MER1_type -5 173 69 2277 50 0 14 chr2 118935493 118935772 -134320811 - AluY SINE Alu -9 302 28 517 292 6 39 chr2 118935772 118935838 -134320745 - MER5B DNA MER1_type -109 69 2 293 287 10 10 chr2 118936010 118936111 -134320472 - L1M4 LINE L1 -1303 4843 4743 214 322 81 0 chr2 118936843 118936930 -134319653 - L3b LINE CR1 -15 1568 1475 229 310 35 69 chr2 118936930 118937104 -134319479 + L2 LINE L2 2843 3010 -262 537 249 31 57 chr2 118937538 118937731 -134318852 - MER5A DNA MER1_type 0 189 2 244 292 26 138 chr2 118937744 118937939 -134318644 + MER5B DNA MER1_type 6 178 0 224 244 141 13 chr2 118938091 118938169 -134318414 - MER5A DNA MER1_type -92 97 10 306 50 0 0 chr2 118939135 118939175 -134317408 + (GA)n Simple_repeat Simple_repeat 2 41 0 288 0 0 0 chr2 118939174 118939206 -134317377 + (TG)n Simple_repeat Simple_repeat 2 33 0 * 956 219 136 61 chr2 118939215 118939652 -134316931 + MLT1C LTR MaLR 1 467 0 292 268 18 18 chr2 118940753 118940865 -134315718 + Charlie8 DNA MER1_type 86 197 -2220 461 313 48 6 chr2 118941162 118941328 -134315255 + MIR SINE MIR 90 262 0 187 403 32 48 chr2 118943505 118943629 -134312954 - L2 LINE L2 0 3272 3151 1840 143 31 55 chr2 118944530 118944914 -134311669 + THE1C LTR MaLR 1 375 0 1731 204 47 31 chr2 118945337 118945790 -134310793 + MLT1C LTR MaLR 6 626 0 204 250 0 59 chr2 118946325 118946393 -134310190 + L3 LINE CR1 1509 1572 -5 21 36 0 0 chr2 118946521 118946549 -134310034 + AT_rich Low_complexity Low_complexity 1 28 0 485 73 0 0 chr2 118947645 118947713 -134308870 + AluSp/q SINE Alu 230 297 -16 245 130 0 37 chr2 118948921 118948975 -134307608 + LTR66 LTR ERVL 388 439 -171 201 147 0 0 chr2 118948976 118949010 -134307573 + (CATATA)n Simple_repeat Simple_repeat 3 36 0 497 146 0 10 chr2 118949268 118949364 -134307219 + (TA)n Simple_repeat Simple_repeat 1 95 0 207 0 0 0 chr2 118949364 118949387 -134307196 + (GA)n Simple_repeat Simple_repeat 2 24 0 652 278 83 9 chr2 118949406 118949622 -134306961 + MIR SINE MIR 31 262 0 2428 87 7 0 chr2 118950036 118950346 -134306237 + AluSx SINE Alu 1 312 0 232 305 73 12 chr2 118951838 118951920 -134304663 + L2 LINE L2 3186 3272 0 224 349 24 54 chr2 118952329 118952495 -134304088 - MIR3 SINE MIR -4 204 44 446 269 75 24 chr2 118952640 118952852 -134303731 - MER58A DNA MER1_type -1 223 1 258 287 11 46 chr2 118952853 118952940 -134303643 - L2 LINE L2 -1 3312 3229 2179 199 52 58 chr2 118953753 118954270 -134302313 - MLT2B2 LTR ERVL -1 514 1 4527 20 0 20 chr2 118955582 118956127 -134300456 + L1PA3 LINE L1 5363 5896 -259 1609 98 5 88 chr2 118956244 118956621 -134299962 + L1PA3 LINE L1 5810 6155 0 628 214 0 0 chr2 118957144 118957261 -134299322 + Tigger3(Golem) DNA MER2_type 2911 3027 -2 574 156 11 0 chr2 118957276 118957366 -134299217 + MSTB LTR MaLR 2 92 -334 988 70 0 0 chr2 118957378 118957507 -134299076 + MSTB1 LTR MaLR 300 428 -4 462 173 12 12 chr2 118957511 118957592 -134298991 + Tigger7 DNA MER2_type 2406 2486 -1 22 0 0 0 chr2 118957752 118957774 -134298809 + AT_rich Low_complexity Low_complexity 1 22 0 239 286 22 66 chr2 118958036 118958127 -134298456 + MER5B DNA MER1_type 4 90 -88 1887 131 0 37 chr2 118959360 118959657 -134296926 - AluSx SINE Alu 0 312 27 274 247 133 48 chr2 118959980 118960372 -134296211 - L1ME4a LINE L1 -5 6116 5692 611 235 45 8 chr2 118961543 118961675 -134294908 + MER5B DNA MER1_type 1 137 -41 2211 106 10 0 chr2 118961735 118962027 -134294556 - AluSx SINE Alu -17 295 1 223 363 18 35 chr2 118962027 118962140 -134294443 - MER5A DNA MER1_type -71 118 8 389 319 153 0 chr2 118962493 118962650 -134293933 - MER5A DNA MER1_type 0 189 9 198 191 0 0 chr2 118962671 118962718 -134293865 + (TA)n Simple_repeat Simple_repeat 2 48 0 299 360 27 9 chr2 118962909 118963020 -134293563 - MIR SINE MIR -149 113 1 522 290 57 31 chr2 118963393 118963586 -134292997 - MIR SINE MIR 0 262 65 260 311 76 0 chr2 118964523 118964642 -134291941 + L2 LINE L2 3184 3311 -2 180 0 0 0 chr2 118968074 118968094 -134288489 + (TCTCTG)n Simple_repeat Simple_repeat 2 21 0 258 24 71 48 chr2 118968166 118968208 -134288375 + L1M1 LINE L1 5846 5888 -414 194 222 0 0 chr2 118968283 118968319 -134288264 + L3 LINE CR1 1537 1572 -5 252 0 0 0 chr2 118968497 118968525 -134288058 + (TTA)n Simple_repeat Simple_repeat 1 28 0 588 29 0 0 chr2 118968672 118968742 -134287841 + (TCTA)n Simple_repeat Simple_repeat 1 70 0 303 306 22 56 chr2 118968961 118969141 -134287442 - MIR SINE MIR -1 261 88 397 296 0 0 chr2 118969187 118969275 -134287308 - L2 LINE L2 -1 3312 3225 527 208 11 22 chr2 118969364 118969542 -134287041 + CT-rich Low_complexity Low_complexity 3 178 0 384 357 105 35 chr2 118971394 118971851 -134284732 + L2 LINE L2 2224 2712 -602 406 281 76 52 chr2 118972053 118972255 -134284328 + MIR SINE MIR 3 207 -55 235 401 0 22 chr2 118972508 118972645 -134283938 - MLT1K LTR MaLR -314 274 141 300 75 30 90 chr2 118974170 118974237 -134282346 + L1PA16 LINE L1 6098 6160 -6 255 114 0 0 chr2 118974842 118974886 -134281697 + (TG)n Simple_repeat Simple_repeat 2 45 0 22166 152 9 8 chr2 118974992 118979802 -134276781 - L1PA11 LINE L1 0 6356 1127 569 293 46 0 chr2 118980030 118980204 -134276379 + MIR SINE MIR 68 249 -13 247 277 21 32 chr2 118980206 118980300 -134276283 + HsTC2 DNA Tc2 4 96 -1802 242 345 118 64 chr2 118980483 118981224 -134275359 - L2 LINE L2 0 3272 2463 180 228 0 114 chr2 118982151 118982230 -134274353 + MIR SINE MIR 96 165 -97 2232 113 0 3 chr2 118983395 118983695 -134272888 + AluSg SINE Alu 1 299 -11 1121 241 179 8 chr2 118984109 118984462 -134272121 + MLT1F1 LTR MaLR 155 567 0 258 299 26 0 chr2 118985159 118985236 -134271347 + (TATG)n Simple_repeat Simple_repeat 4 82 0 183 80 0 0 chr2 118986936 118986961 -134269622 + (TTA)n Simple_repeat Simple_repeat 2 26 0 651 302 14 31 chr2 118987117 118987339 -134269244 - MIR SINE MIR -8 254 37 372 315 68 54 chr2 118987380 118987602 -134268981 - MIR SINE MIR -22 240 16 220 416 49 16 chr2 118987970 118988155 -134268428 + L2 LINE L2 3078 3268 -4 1715 181 50 16 chr2 118990796 118991172 -134265411 + MLT1B LTR MaLR 2 390 0 268 222 28 0 chr2 118991444 118991516 -134265067 + (TA)n Simple_repeat Simple_repeat 2 75 0 1308 226 30 36 chr2 118992360 118992783 -134263800 - MLT1C LTR MaLR -17 450 25 1098 280 65 24 chr2 118992938 118993534 -134263049 + Charlie7 DNA MER1_type 69 689 -1923 1287 245 43 11 chr2 118994160 118994536 -134262047 - MER70A LTR ERVL -84 388 1 2040 145 3 3 chr2 118994795 118995105 -134261478 - AluSx SINE Alu -2 310 1 486 201 108 89 chr2 118995105 118995319 -134261264 + LTR33A LTR ERVL 20 237 -286 494 262 77 0 chr2 118995357 118995540 -134261043 + LTR33A LTR ERVL 320 516 -7 810 267 9 18 chr2 118996167 118996388 -134260195 + MER58A DNA MER1_type 6 224 0 246 234 21 0 chr2 118996447 118996494 -134260089 - L2 LINE L2 -15 3257 3210 2131 135 0 0 chr2 118996512 118996809 -134259774 + AluSx SINE Alu 1 297 -15 276 333 30 0 chr2 118997208 118997307 -134259276 - L2 LINE L2 -24 3289 3188 683 244 43 48 chr2 118997441 118997671 -134258912 + MIR SINE MIR 13 241 -21 181 213 85 0 chr2 118997646 118997693 -134258890 + L2 LINE L2 3221 3271 -1 * 284 278 75 108 chr2 118998031 118998087 -134258496 - MIR SINE MIR -10 252 196 2249 116 0 0 chr2 118998087 118998390 -134258193 + AluSx SINE Alu 1 303 -9 284 278 75 108 chr2 118998390 118998574 -134258009 - MIR SINE MIR -66 196 20 26 50 0 0 chr2 118998801 118998841 -134257742 + AT_rich Low_complexity Low_complexity 1 40 0 435 311 115 25 chr2 118998925 118999039 -134257544 - L1ME4a LINE L1 -295 5826 5724 2199 104 20 3 chr2 118999039 118999337 -134257246 - AluSq SINE Alu -10 303 1 435 311 115 25 chr2 118999337 118999466 -134257117 - L1ME4a LINE L1 -397 5724 5561 2108 107 27 0 chr2 118999758 119000057 -134256526 + AluSx SINE Alu 1 307 -5 24 32 0 0 chr2 119000057 119000088 -134256495 + AT_rich Low_complexity Low_complexity 1 31 0 399 152 0 0 chr2 119000115 119000194 -134256389 + (TG)n Simple_repeat Simple_repeat 2 80 0 21 57 0 0 chr2 119002236 119002271 -134254312 + AT_rich Low_complexity Low_complexity 1 35 0 421 309 55 44 chr2 119003270 119003542 -134253041 + HsTC2 DNA Tc2 500 774 -1124 285 152 61 0 chr2 119004277 119004343 -134252240 - MER3 DNA MER1_type -8 201 132 949 87 0 0 chr2 119004348 119004475 -134252108 + AluSg/x SINE Alu 179 305 -5 504 215 47 0 chr2 119004475 119004582 -134252001 - MER3 DNA MER1_type -81 128 17 360 305 15 15 chr2 119004811 119004942 -134251641 - MIR3 SINE MIR -9 199 69 1520 237 94 28 chr2 119005678 119006104 -134250479 - LTR48B LTR ERV1 0 644 173 207 0 0 0 chr2 119006104 119006127 -134250456 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 1520 237 94 28 chr2 119006127 119006241 -134250342 - LTR48B LTR ERV1 -471 173 68 226 279 112 50 chr2 119006729 119006890 -134249693 + MLT1I LTR MaLR 1 171 -238 189 306 74 46 chr2 119007160 119007268 -134249315 + MIR3 SINE MIR 98 208 0 584 330 41 9 chr2 119007886 119008107 -134248476 + MIR SINE MIR 32 259 -3 2492 69 0 0 chr2 119008544 119008850 -134247733 + AluY SINE Alu 1 306 -5 1106 192 43 98 chr2 119010142 119010421 -134246162 + LTR56 LTR ERV1 1 214 -223 3819 148 32 17 chr2 119010421 119011082 -134245501 - LTR51 LTR ERV1 0 671 1 1106 192 43 98 chr2 119011082 119011295 -134245288 + LTR56 LTR ERV1 214 437 0 310 263 113 88 chr2 119011659 119011899 -134244684 - MIR SINE MIR -14 248 3 2482 56 0 13 chr2 119012000 119012303 -134244280 + AluY SINE Alu 1 299 -12 353 298 93 39 chr2 119012729 119013008 -134243575 + Tigger8 DNA MER2_type 343 636 -30 346 273 98 15 chr2 119013897 119014029 -134242554 - MIR SINE MIR -9 253 111 243 261 96 70 chr2 119014364 119014479 -134242104 + MIR SINE MIR 6 123 -139 738 294 6 0 chr2 119015584 119015761 -134240822 + MER5A DNA MER1_type 9 186 -3 266 98 20 0 chr2 119016613 119016664 -134239919 + (TTTG)n Simple_repeat Simple_repeat 1 52 0 1875 137 15 0 chr2 119016668 119016939 -134239644 - AluSx SINE Alu -37 275 1 204 40 0 0 chr2 119016943 119016968 -134239615 + (T)n Simple_repeat Simple_repeat 1 25 0 2195 198 46 15 chr2 119017420 119018212 -134238371 + MER54A LTR ERVL 1 901 0 186 296 139 17 chr2 119018266 119018438 -134238145 - L2 LINE L2 -92 3221 3029 549 268 68 34 chr2 119018794 119019045 -134237538 - MIR SINE MIR 0 262 3 5451 81 13 9 chr2 119019983 119020746 -134235837 + MER4E LTR ERV1 1 766 0 2119 165 18 18 chr2 119020856 119021243 -134235340 - MLT1B LTR MaLR -1 389 3 235 355 91 9 chr2 119022367 119022477 -134234106 + L2 LINE L2 3154 3272 0 403 293 93 26 chr2 119023739 119023937 -134232646 + MIR3 SINE MIR 2 210 -52 2012 154 128 13 chr2 119023937 119024321 -134232262 - MSTA LTR MaLR 0 428 1 403 293 93 26 chr2 119024321 119024352 -134232231 + MIR3 SINE MIR 210 237 -25 310 291 45 52 chr2 119024604 119024738 -134231845 + MIR3 SINE MIR 22 154 -54 2020 142 0 0 chr2 119025446 119025741 -134230842 + AluSx SINE Alu 10 304 -8 5014 27 2 2 chr2 119025992 119026579 -134230004 + L1PA3 LINE L1 5567 6153 -2 1365 239 70 28 chr2 119027599 119028030 -134228553 + MLT1C LTR MaLR 1 449 -18 6090 132 17 21 chr2 119028064 119029150 -134227433 - Ricksha DNA DNA -475 2771 1691 681 196 5 10 chr2 119029151 119029343 -134227240 - Ricksha DNA DNA -1762 284 1 411 261 98 90 chr2 119029636 119029881 -134226702 + MIR SINE MIR 13 259 -3 408 200 15 92 chr2 119030755 119030828 -134225755 + MER58B DNA MER1_type 222 282 -2138 2199 116 0 0 chr2 119030828 119031120 -134225463 - AluSg SINE Alu -18 292 1 408 200 15 92 chr2 119031120 119031176 -134225407 + MER58B DNA MER1_type 282 341 0 22 35 0 0 chr2 119031642 119031671 -134224912 + AT_rich Low_complexity Low_complexity 1 29 0 252 271 0 0 chr2 119031788 119031873 -134224710 + Charlie8 DNA MER1_type 92 176 -2241 185 209 23 23 chr2 119032543 119032586 -134223997 - MIR SINE MIR -73 135 93 959 205 61 73 chr2 119033964 119034291 -134222292 + MER5C DNA MER1_type 1 323 -1 363 32 32 16 chr2 119034400 119034462 -134222121 + (TTTA)n Simple_repeat Simple_repeat 2 64 0 7564 9 1 0 chr2 119034466 119035364 -134221219 - L1PA2 LINE L1 -3 6152 5254 752 184 81 0 chr2 119035608 119035798 -134220785 - AluSg/x SINE Alu 0 336 136 299 276 8 98 chr2 119036338 119036398 -134220185 + MER5B DNA MER1_type 67 112 -66 2424 71 0 0 chr2 119036398 119036692 -134219891 - AluY SINE Alu -17 294 1 299 276 8 98 chr2 119036692 119036754 -134219829 + MER5B DNA MER1_type 112 178 0 464 252 166 13 chr2 119037918 119038069 -134218514 - MER5A DNA MER1_type 0 189 16 555 195 81 0 chr2 119038087 119038210 -134218373 - MER5A DNA MER1_type -56 133 1 358 211 296 7 chr2 119038675 119038817 -134217766 - MER5A DNA MER1_type -5 184 2 285 308 29 10 chr2 119039422 119039526 -134217057 + MIR SINE MIR 90 195 -67 2467 74 0 0 chr2 119039687 119039997 -134216586 + AluY SINE Alu 1 310 -1 491 289 40 13 chr2 119040601 119040753 -134215830 + MER5B DNA MER1_type 17 172 -6 220 262 0 49 chr2 119041268 119041329 -134215254 - L2 LINE L2 0 3313 3256 912 196 6 6 chr2 119041344 119041517 -134215066 - AluJb SINE Alu -3 309 137 25 31 0 0 chr2 119042006 119042038 -134214545 + AT_rich Low_complexity Low_complexity 1 32 0 340 327 26 9 chr2 119042606 119042719 -134213864 + MER5B DNA MER1_type 1 115 -63 444 213 29 11 chr2 119043091 119043265 -134213318 + GA-rich Low_complexity Low_complexity 4 180 0 218 308 0 0 chr2 119043268 119043320 -134213263 + polypurine Low_complexity Low_complexity 1 52 0 563 189 22 22 chr2 119043320 119043500 -134213083 + GA-rich Low_complexity Low_complexity 1 180 0 769 198 66 6 chr2 119043731 119043898 -134212685 + MER5A DNA MER1_type 13 189 0 264 250 10 62 chr2 119046074 119046170 -134210413 + L2 LINE L2 2550 2640 -674 524 239 54 140 chr2 119046180 119046515 -134210068 + LTR16A1 LTR ERVL 8 313 -144 31 26 0 0 chr2 119046581 119046619 -134209964 + AT_rich Low_complexity Low_complexity 1 38 0 238 336 70 16 chr2 119047102 119047230 -134209353 - MIR SINE MIR -108 154 20 671 282 79 61 chr2 119047360 119047754 -134208829 + LTR40a LTR ERVL 1 401 -118 235 242 16 0 chr2 119047740 119047802 -134208781 + REP3 LTR ERV 456 518 -44 * 271 361 50 14 chr2 119049160 119049379 -134207204 - L2 LINE L2 -343 2971 2745 28 71 0 0 chr2 119050684 119050740 -134205843 + AT_rich Low_complexity Low_complexity 1 56 0 526 294 63 29 chr2 119051901 119052248 -134204335 + L1MEd LINE L1 977 1335 -5195 2475 248 105 21 chr2 119052281 119052954 -134203629 + L1MD2 LINE L1 5423 6183 -176 240 86 0 0 chr2 119052954 119052989 -134203594 + (CA)n Simple_repeat Simple_repeat 1 35 0 2475 248 105 21 chr2 119052989 119053165 -134203418 + L1MD2 LINE L1 6183 6343 -16 207 0 0 0 chr2 119053266 119053289 -134203294 + (A)n Simple_repeat Simple_repeat 1 23 0 234 216 216 17 chr2 119053306 119053343 -134203240 + L1MEd LINE L1 1419 1447 -5083 208 70 47 0 chr2 119053343 119053386 -134203197 + (TA)n Simple_repeat Simple_repeat 2 46 0 234 216 216 17 chr2 119053386 119053464 -134203119 + L1MEd LINE L1 1447 1557 -4973 384 255 142 7 chr2 119053679 119053820 -134202763 + MER5B DNA MER1_type 18 177 -1 2081 127 0 23 chr2 119053897 119054205 -134202378 + AluSx SINE Alu 1 301 -11 229 277 142 0 chr2 119054214 119054362 -134202221 + L1MEd LINE L1 1859 2027 -4513 754 223 74 11 chr2 119054592 119054767 -134201816 - MLT1E2 LTR MaLR -440 186 1 225 288 17 0 chr2 119055348 119055407 -134201176 - MER63 DNA MER1_type -311 750 691 197 65 32 0 chr2 119055819 119055850 -134200733 + (CA)n Simple_repeat Simple_repeat 1 32 0 1956 132 3 7 chr2 119058201 119058517 -134198066 - AluSx SINE Alu 0 315 1 250 274 0 0 chr2 119059052 119059103 -134197480 + MIR SINE MIR 94 144 -64 855 271 18 0 chr2 119059156 119059385 -134197198 + L1ME1 LINE L1 5873 6105 -61 191 137 0 59 chr2 119060054 119060105 -134196478 + (TATATG)n Simple_repeat Simple_repeat 4 51 0 260 273 182 0 chr2 119060166 119060265 -134196318 - L2 LINE L2 0 3272 3156 697 306 68 0 chr2 119060941 119061163 -134195420 - MIR SINE MIR -25 237 1 214 310 88 35 chr2 119061858 119061971 -134194612 - L2 LINE L2 -13 3300 3182 226 296 25 0 chr2 119062603 119062684 -134193899 - MER63 DNA MER1_type 0 1060 978 221 341 133 7 chr2 119063981 119064116 -134192467 + MIR SINE MIR 5 156 -106 1153 342 37 7 chr2 119064465 119064898 -134191685 - MLT1J2 LTR MaLR -4 446 1 2415 65 0 0 chr2 119065916 119066207 -134190376 + AluY SINE Alu 1 291 -20 221 119 24 0 chr2 119068390 119068432 -134188151 + (TA)n Simple_repeat Simple_repeat 1 43 0 1751 173 11 0 chr2 119069615 119069893 -134186690 + AluJb SINE Alu 2 282 -30 241 267 40 27 chr2 119070296 119070371 -134186212 - MIR SINE MIR -114 148 73 811 292 136 30 chr2 119073014 119073514 -134183069 - L2 LINE L2 -22 3291 2722 24 32 0 0 chr2 119074310 119074341 -134182242 + AT_rich Low_complexity Low_complexity 1 31 0 1741 65 0 14 chr2 119074477 119074691 -134181892 - AluSc SINE Alu -13 296 86 228 244 441 0 chr2 119075548 119075675 -134180908 + MER5A DNA MER1_type 7 189 0 203 375 0 0 chr2 119075973 119076053 -134180530 + MIR SINE MIR 183 262 0 3340 62 0 9 chr2 119076655 119077107 -134179476 - LTR7 LTR ERV1 -2 448 1 220 379 40 8 chr2 119077282 119077406 -134179177 + MIR3 SINE MIR 33 160 -48 180 266 89 38 chr2 119077460 119077539 -134179044 + MIR SINE MIR 24 106 -156 25 51 0 0 chr2 119078326 119078365 -134178218 + AT_rich Low_complexity Low_complexity 1 39 0 2405 193 35 15 chr2 119078648 119079129 -134177454 + MER68 LTR ERV1 3 493 -69 369 0 0 0 chr2 119079174 119079215 -134177368 + (TG)n Simple_repeat Simple_repeat 2 42 0 439 234 19 0 chr2 119079216 119079323 -134177260 - L1MC4 LINE L1 -1020 7022 6914 2716 67 0 0 chr2 119079335 119079679 -134176904 - L1PA7 LINE L1 -4 6150 5807 407 233 11 11 chr2 119079701 119079791 -134176792 - L2 LINE L2 -12 3301 3212 1876 107 62 45 chr2 119081402 119081693 -134174890 + AluSq SINE Alu 1 296 -17 4760 125 8 11 chr2 119081771 119082517 -134174066 + Tigger2 DNA MER2_type 1 744 -1974 349 87 87 0 chr2 119082579 119082648 -134173935 + Tigger2 DNA MER2_type 2461 2535 -183 898 187 0 13 chr2 119082749 119082904 -134173679 + Tigger2 DNA MER2_type 2555 2707 -11 273 349 0 0 chr2 119083614 119083700 -134172883 + MIR SINE MIR 40 125 -137 2143 244 82 56 chr2 119083752 119084685 -134171898 + L1MC3 LINE L1 6820 7777 -8 677 305 7 34 chr2 119084804 119085096 -134171487 + L1ME3A LINE L1 5887 6170 0 2265 105 0 0 chr2 119085110 119085406 -134171177 + AluSq SINE Alu 1 296 -17 215 331 123 19 chr2 119086929 119087083 -134169500 - MIR SINE MIR -73 189 20 2571 61 0 0 chr2 119087246 119087556 -134169027 + AluY SINE Alu 1 310 -1 481 316 92 14 chr2 119087702 119087920 -134168663 + MIR SINE MIR 22 256 -6 2513 100 6 17 chr2 119089243 119089602 -134166981 + THE1A LTR MaLR 1 355 0 11197 93 14 9 chr2 119089602 119091175 -134165408 + THE1A-int LTR MaLR 1 1580 0 2682 90 3 0 chr2 119091175 119091529 -134165054 + THE1A LTR MaLR 1 355 0 701 313 99 25 chr2 119091830 119091895 -134164688 - MLT1I LTR MaLR 0 409 350 207 0 0 0 chr2 119091895 119091918 -134164665 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 701 313 99 25 chr2 119091918 119092216 -134164367 - MLT1I LTR MaLR -59 350 19 252 313 12 94 chr2 119092518 119092678 -134163905 - MIR SINE MIR -70 192 46 590 285 55 65 chr2 119093018 119093327 -134163256 + L2 LINE L2 2403 2708 -606 257 357 0 9 chr2 119093344 119093456 -134163127 - L1ME3A LINE L1 -21 6149 6039 1497 118 16 4 chr2 119093531 119093786 -134162797 - L1MA4 LINE L1 -7 6293 6036 21 100 0 0 chr2 119093825 119093895 -134162688 + AT_rich Low_complexity Low_complexity 1 70 0 1463 294 82 25 chr2 119093967 119094480 -134162103 - MLT1G LTR MaLR 0 590 49 1018 280 15 3 chr2 119094487 119094784 -134161799 - L1M3 LINE L1 -366 5804 5496 454 315 152 21 chr2 119094819 119095242 -134161341 + L2 LINE L2 2726 3200 -113 622 215 46 0 chr2 119096002 119096132 -134160451 - MER5A DNA MER1_type -53 136 1 212 287 0 87 chr2 119096626 119096742 -134159841 + MER5A DNA MER1_type 37 149 -40 236 188 14 0 chr2 119097712 119097781 -134158802 + (CCA)n Simple_repeat Simple_repeat 1 70 0 195 102 41 20 chr2 119097850 119097899 -134158684 + (CACCAT)n Simple_repeat Simple_repeat 3 52 0 212 197 15 30 chr2 119097907 119097973 -134158610 + (CCA)n Simple_repeat Simple_repeat 1 65 0 1550 169 62 8 chr2 119098584 119098844 -134157739 + AluJo SINE Alu 1 274 -38 315 0 0 0 chr2 119098848 119098883 -134157700 + (CA)n Simple_repeat Simple_repeat 2 36 0 290 44 0 44 chr2 119098979 119099024 -134157559 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 21 0 0 0 chr2 119100026 119100047 -134156536 + AT_rich Low_complexity Low_complexity 1 21 0 414 0 0 0 chr2 119100258 119100304 -134156279 + (CA)n Simple_repeat Simple_repeat 2 47 0 194 158 0 26 chr2 119100443 119100481 -134156102 - L3b LINE CR1 -150 1433 1397 429 218 0 16 chr2 119100750 119100874 -134155709 - Charlie5 DNA MER1_type -22 2590 2469 283 242 16 0 chr2 119100873 119100935 -134155648 - Charlie5 DNA MER1_type -2543 69 7 * 202 310 135 53 chr2 119102439 119102540 -134154043 + L2 LINE L2 2849 2940 -332 1067 202 4 47 chr2 119102540 119102773 -134153810 - MER58A DNA MER1_type 0 224 2 202 310 135 53 chr2 119102773 119103065 -134153518 + L2 LINE L2 2940 3272 0 528 300 46 46 chr2 119103600 119103883 -134152700 - LTR33 LTR ERVL -2 519 237 319 289 11 11 chr2 119103928 119104018 -134152565 - LTR33 LTR ERVL -385 136 47 537 296 25 0 chr2 119105604 119105763 -134150820 + MIR3 SINE MIR 46 208 0 372 254 51 8 chr2 119106467 119106585 -134149998 - MIR SINE MIR -26 236 114 1978 146 44 14 chr2 119106796 119107160 -134149423 - THE1C LTR MaLR 0 375 1 9870 120 44 16 chr2 119107160 119107206 -134149377 - THE1C-int LTR MaLR 0 1580 1537 3852 144 35 6 chr2 119107206 119107832 -134148751 - LTR9B LTR ERV1 0 644 1 9870 120 44 16 chr2 119107832 119108927 -134147656 - THE1C-int LTR MaLR -43 1537 381 555 110 33 0 chr2 119108927 119109018 -134147565 - L1PA5 LINE L1 -1 6153 6060 9870 120 44 16 chr2 119109018 119109411 -134147172 - THE1C-int LTR MaLR -1199 381 1 1955 140 67 9 chr2 119109419 119109761 -134146822 - THE1C LTR MaLR -12 363 2 246 314 47 65 chr2 119109911 119110080 -134146503 - LTR33 LTR ERVL -94 427 262 26 50 0 0 chr2 119110925 119110965 -134145618 + AT_rich Low_complexity Low_complexity 1 40 0 1074 246 44 52 chr2 119112676 119112849 -134143734 - MER39 LTR ERV1 -4 703 530 1948 137 7 0 chr2 119112849 119113142 -134143441 - AluSg SINE Alu -15 295 1 1074 246 44 52 chr2 119113142 119113334 -134143249 - MER39 LTR ERV1 -177 530 341 309 127 20 95 chr2 119113353 119113452 -134143131 - MER39 LTR ERV1 -436 263 127 246 156 0 0 chr2 119113928 119113973 -134142610 + (TG)n Simple_repeat Simple_repeat 2 46 0 289 93 0 0 chr2 119114517 119114560 -134142023 + 5S rRNA rRNA 1 43 -78 194 305 0 0 chr2 119114875 119114934 -134141649 + L2 LINE L2 3255 3313 0 1933 123 0 11 chr2 119115321 119115627 -134140956 + AluSg SINE Alu 1 303 0 1955 104 52 36 chr2 119115683 119115991 -134140592 - AluSq SINE Alu 0 313 1 199 241 130 0 chr2 119116882 119116936 -134139647 + L2 LINE L2 3248 3308 -5 315 0 0 0 chr2 119117337 119117372 -134139211 + (T)n Simple_repeat Simple_repeat 1 35 0 324 0 0 0 chr2 119118331 119118367 -134138216 + (T)n Simple_repeat Simple_repeat 1 36 0 245 29 29 0 chr2 119119166 119119200 -134137383 + (TA)n Simple_repeat Simple_repeat 1 35 0 2052 88 3 7 chr2 119119560 119119879 -134136704 + AluY SINE Alu 1 318 0 305 319 30 7 chr2 119120973 119121108 -134135475 + MIR SINE MIR 111 248 -14 195 254 0 0 chr2 119121297 119121360 -134135223 + (TA)n Simple_repeat Simple_repeat 1 63 0 394 245 5 80 chr2 119121406 119121594 -134134989 + (TA)n Simple_repeat Simple_repeat 1 174 0 345 274 11 54 chr2 119121669 119121855 -134134728 + (TA)n Simple_repeat Simple_repeat 1 178 0 465 259 10 52 chr2 119121872 119122678 -134133905 + (TA)n Simple_repeat Simple_repeat 1 771 0 7431 84 11 17 chr2 119123517 119124580 -134132003 - MER11C LTR ERVK -14 1057 1 306 167 92 18 chr2 119125027 119125103 -134131480 - MLT1I LTR MaLR -6 428 348 301 308 23 23 chr2 119125287 119125420 -134131163 - MLT1I LTR MaLR 0 409 277 234 281 126 15 chr2 119125458 119125593 -134130990 - MLT1J2 LTR MaLR -229 221 72 1510 179 72 7 chr2 119125683 119125974 -134130609 - AluSg SINE Alu 0 310 1 33 25 0 0 chr2 119125975 119126015 -134130568 + AT_rich Low_complexity Low_complexity 1 40 0 234 310 95 35 chr2 119128339 119128455 -134128128 + L2 LINE L2 3142 3264 -8 355 326 16 0 chr2 119129368 119129497 -134127086 + MER94 DNA DNA 1 131 -3 394 196 45 27 chr2 119130149 119130261 -134126322 + L1MEd LINE L1 65 178 -5941 453 338 48 45 chr2 119130282 119130637 -134125946 + L1MEd LINE L1 277 632 -5487 23 0 0 0 chr2 119132125 119132148 -134124435 + AT_rich Low_complexity Low_complexity 1 23 0 222 329 155 31 chr2 119132320 119132481 -134124102 - MIR SINE MIR -80 182 2 593 158 20 0 chr2 119132698 119132799 -134123784 + L1MC1 LINE L1 6231 6333 0 200 316 26 13 chr2 119134265 119134341 -134122242 + L2 LINE L2 2678 2754 -560 261 0 0 0 chr2 119134431 119134460 -134122123 + (CATAT)n Simple_repeat Simple_repeat 3 31 0 450 195 0 0 chr2 119134462 119134549 -134122034 - FRAM/FAM SINE Alu -88 88 2 275 355 0 47 chr2 119134828 119134935 -134121648 + L2 LINE L2 3197 3298 -15 360 324 70 28 chr2 119135586 119135913 -134120670 + L1MEd LINE L1 443 783 -5336 1361 169 55 0 chr2 119136180 119136417 -134120166 - MLT1A1 LTR MaLR -6 359 110 25 0 0 0 chr2 119136709 119136734 -134119849 + AT_rich Low_complexity Low_complexity 1 25 0 1589 156 45 52 chr2 119136734 119137022 -134119561 - AluJb SINE Alu -19 293 8 436 223 8 8 chr2 119137291 119137421 -134119162 + CT-rich Low_complexity Low_complexity 1 130 0 1293 194 111 29 chr2 119137421 119137700 -134118883 - AluJo SINE Alu -6 306 5 202 279 49 0 chr2 119138857 119138918 -134117665 - L2 LINE L2 -1 3271 3208 226 385 47 21 chr2 119139312 119139504 -134117079 + L2 LINE L2 2709 2905 -409 225 0 0 0 chr2 119139529 119139554 -134117029 + (T)n Simple_repeat Simple_repeat 1 25 0 1976 156 8 31 chr2 119139701 119140053 -134116530 - MER2 DNA MER2_type 0 344 1 915 199 34 17 chr2 119140510 119140746 -134115837 + L1ME3 LINE L1 5868 6107 -55 355 231 87 48 chr2 119140972 119140984 -134115599 - MIR SINE MIR -67 141 131 1547 238 54 68 chr2 119140984 119141559 -134115024 + MLT1F1 LTR MaLR 1 567 0 355 231 87 48 chr2 119141559 119141650 -134114933 - MIR SINE MIR -77 131 34 238 314 38 0 chr2 119141649 119141754 -134114829 + MIR SINE MIR 152 260 -2 * 213 233 0 67 chr2 119142570 119142630 -134113953 + polypurine Low_complexity Low_complexity 5 60 0 21 36 0 0 chr2 119142885 119142913 -134113670 + AT_rich Low_complexity Low_complexity 1 28 0 1128 311 99 39 chr2 119143470 119144314 -134112269 + L1ME3A LINE L1 5255 6139 -31 236 300 80 93 chr2 119144358 119144595 -134111988 - MIR SINE MIR -1 261 28 329 120 0 0 chr2 119145129 119145179 -134111404 + MADE1 DNA Mariner 26 75 -5 267 192 0 192 chr2 119145392 119145445 -134111138 + MIR SINE MIR 66 91 -171 2054 126 7 3 chr2 119145445 119145754 -134110829 - AluSx SINE Alu -2 310 1 267 192 0 192 chr2 119145754 119145804 -134110779 + MIR SINE MIR 91 149 -113 289 262 110 58 chr2 119146195 119146386 -134110197 - MIR SINE MIR -26 236 36 1716 122 0 119 chr2 119146510 119146854 -134109729 + AluSq SINE Alu 1 303 0 455 293 146 12 chr2 119147337 119147501 -134109082 - MER5A DNA MER1_type 0 189 4 254 396 66 16 chr2 119147746 119147928 -134108655 - MIR SINE MIR -15 247 57 22 35 0 0 chr2 119147953 119147982 -134108601 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 119148955 119148976 -134107607 + AT_rich Low_complexity Low_complexity 1 21 0 1040 309 27 41 chr2 119150746 119151115 -134105468 + MLT2E LTR ERVL 3 366 -262 246 272 111 12 chr2 119151740 119151821 -134104762 - L2 LINE L2 -13 3259 3171 2006 124 7 0 chr2 119153296 119153617 -134102966 + AluSx SINE Alu 1 323 0 198 0 0 0 chr2 119153729 119153751 -134102832 + (GAAAA)n Simple_repeat Simple_repeat 4 25 0 637 221 40 7 chr2 119153986 119154135 -134102448 - MIR SINE MIR -44 218 65 421 332 94 8 chr2 119156285 119156520 -134100063 + MIR SINE MIR 8 262 0 227 173 19 0 chr2 119156661 119156713 -134099870 + (TA)n Simple_repeat Simple_repeat 2 54 0 2384 215 9 7 chr2 119156795 119157251 -134099332 - MER70A LTR ERVL -10 462 6 237 379 0 0 chr2 119157284 119157387 -134099196 + MIR SINE MIR 13 115 -147 519 332 51 23 chr2 119157630 119157847 -134098736 + MIR SINE MIR 40 262 0 440 71 0 192 chr2 119158854 119158953 -134097630 - MADE1 DNA Mariner 0 80 1 23 0 0 0 chr2 119159081 119159104 -134097479 + AT_rich Low_complexity Low_complexity 1 23 0 254 89 0 22 chr2 119159104 119159149 -134097434 - L1PA16 LINE L1 -9 6157 6114 18556 110 22 9 chr2 119159179 119159564 -134097019 + Charlie3 DNA MER1_type 2 381 -2325 2228 145 8 19 chr2 119159564 119159943 -134096640 - THE1C LTR MaLR 0 375 1 18556 110 22 9 chr2 119159943 119162228 -134094355 + Charlie3 DNA MER1_type 381 2706 0 263 347 88 7 chr2 119162231 119162378 -134094205 - MIR SINE MIR -101 161 3 210 367 70 32 chr2 119162675 119162833 -134093750 - L2 LINE L2 -3 3269 3106 304 341 101 12 chr2 119163872 119164056 -134092527 + MIR SINE MIR 3 202 -60 254 348 32 19 chr2 119164072 119164227 -134092356 + L2 LINE L2 2420 2576 -738 633 172 8 60 chr2 119164235 119164273 -134092310 - MER20 DNA MER1_type 0 219 181 3747 219 81 16 chr2 119164273 119165250 -134091333 - MER45B DNA AcHobo 0 1040 1 633 172 8 60 chr2 119165250 119165345 -134091238 - MER20 DNA MER1_type -38 181 93 3442 140 16 13 chr2 119165760 119166369 -134090214 - L1MA4 LINE L1 -7 6293 5683 209 243 0 0 chr2 119166713 119166750 -134089833 - L2 LINE L2 -86 3186 3150 1170 81 9 18 chr2 119168866 119169115 -134087468 + (TCTA)n Simple_repeat Simple_repeat 1 424 0 27 29 0 0 chr2 119169555 119169589 -134086994 + AT_rich Low_complexity Low_complexity 1 34 0 3302 104 11 47 chr2 119169594 119170152 -134086431 + L1PB2 LINE L1 5614 6151 0 1081 215 69 4 chr2 119171753 119172013 -134084570 - MLT1D LTR MaLR -49 456 180 2150 83 0 17 chr2 119172024 119172325 -134084258 - L1PB1 LINE L1 0 6151 5856 2191 188 31 5 chr2 119172519 119172935 -134083648 - MSTA LTR MaLR -1 427 1 424 346 74 4 chr2 119173230 119173461 -134083122 + MIR SINE MIR 1 247 -15 24 32 0 0 chr2 119174109 119174140 -134082443 + AT_rich Low_complexity Low_complexity 1 31 0 248 321 28 23 chr2 119175187 119175319 -134081264 + MIR SINE MIR 21 150 -63 2455 65 0 13 chr2 119175325 119175634 -134080949 + AluY SINE Alu 6 310 -1 2017 161 51 5 chr2 119176347 119176720 -134079863 + MLT1B LTR MaLR 1 390 0 210 161 54 0 chr2 119176852 119176908 -134079675 + (TA)n Simple_repeat Simple_repeat 2 60 0 228 302 70 47 chr2 119177437 119177566 -134079017 - L2 LINE L2 -8 3264 3133 208 234 0 0 chr2 119178104 119178151 -134078432 - L2 LINE L2 -2 3311 3265 249 33 0 0 chr2 119179396 119179426 -134077157 + (TCTG)n Simple_repeat Simple_repeat 1 30 0 25 31 0 0 chr2 119181987 119182019 -134074564 + AT_rich Low_complexity Low_complexity 1 32 0 475 296 26 21 chr2 119182434 119182623 -134073960 + MIR SINE MIR 73 262 0 640 311 85 29 chr2 119182780 119183195 -134073388 + MLT1J2 LTR MaLR 1 448 -2 207 381 40 32 chr2 119183195 119183321 -134073262 + MIR3 SINE MIR 15 141 -67 12402 32 1 1 chr2 119183339 119184830 -134071753 - L1PA3 LINE L1 -1136 5010 3520 7573 31 1 0 chr2 119184830 119185969 -134070614 + L1PA3 LINE L1 5012 6152 -3 299 249 48 85 chr2 119186745 119186984 -134069599 - L1ME3A LINE L1 0 6170 5940 759 199 39 67 chr2 119187019 119187136 -134069447 - L1ME3A LINE L1 -208 5962 5843 2517 49 0 10 chr2 119187136 119187442 -134069141 + AluY SINE Alu 1 303 -8 759 199 39 67 chr2 119187442 119187606 -134068977 - L1ME3A LINE L1 -327 5843 5689 255 192 128 13 chr2 119187602 119187680 -134068903 + L1MB1 LINE L1 6079 6165 -3 * 400 302 123 10 chr2 119187799 119188221 -134068362 - L1ME3A LINE L1 -606 5556 5087 6183 143 25 22 chr2 119188316 119188640 -134067943 + HSMAR2 DNA Mariner 2 323 -979 2157 96 3 0 chr2 119188640 119188956 -134067627 - AluY SINE Alu 0 317 1 6183 143 25 22 chr2 119188956 119189690 -134066893 + HSMAR2 DNA Mariner 323 1065 -237 712 297 43 9 chr2 119189732 119190059 -134066524 - L1ME3A LINE L1 -1188 4958 4621 5252 163 41 4 chr2 119190089 119191058 -134065525 - L1MC1 LINE L1 0 6402 5398 1054 260 53 29 chr2 119191110 119191452 -134065131 + MLT1B LTR MaLR 18 367 -23 2707 215 68 14 chr2 119191473 119192101 -134064482 + MLT1B-int LTR MaLR 1 662 -709 305 227 0 0 chr2 119192113 119192179 -134064404 + MLT1B-int LTR MaLR 819 884 -487 507 248 65 48 chr2 119192628 119192938 -134063645 - L1MC1 LINE L1 -1482 4733 4419 1122 101 6 0 chr2 119192939 119193107 -134063476 - L1PA13 LINE L1 -6 6157 5989 477 79 0 0 chr2 119193111 119193174 -134063409 + L1P4 LINE L1 5609 5671 -497 842 179 0 0 chr2 119193174 119193308 -134063275 - AluJo SINE Alu -178 134 1 3973 259 63 36 chr2 119193309 119193557 -134063026 - L1MC1 LINE L1 -1806 4409 4169 1954 137 7 19 chr2 119193557 119193864 -134062719 + AluSx SINE Alu 1 303 -9 3973 259 63 36 chr2 119193864 119196063 -134060520 - L1MC1 LINE L1 -2046 4169 1929 675 255 26 13 chr2 119196158 119196389 -134060194 - L1M4 LINE L1 -2201 3945 3712 22 56 0 0 chr2 119196449 119196485 -134060098 + AT_rich Low_complexity Low_complexity 1 36 0 365 318 23 8 chr2 119196599 119196728 -134059855 + MIR SINE MIR 37 167 -95 366 356 62 29 chr2 119197192 119197400 -134059183 + L1MEd LINE L1 561 775 -5344 264 188 0 0 chr2 119197445 119197509 -134059074 + (TA)n Simple_repeat Simple_repeat 1 64 0 732 186 161 21 chr2 119197550 119197595 -134058988 + ORSL DNA AcHobo 6 43 -232 194 0 0 37 chr2 119197595 119197622 -134058961 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 732 186 161 21 chr2 119197622 119197812 -134058771 + ORSL DNA AcHobo 43 274 -1 248 285 24 41 chr2 119197851 119197974 -134058609 + L1MEd LINE L1 895 1015 -5104 443 330 129 24 chr2 119198801 119199401 -134057182 - L2 LINE L2 0 3313 2579 226 274 0 0 chr2 119199580 119199631 -134056952 + (CA)n Simple_repeat Simple_repeat 2 52 0 7930 242 44 19 chr2 119199964 119202309 -134054274 + L1PA15 LINE L1 1 3022 -3775 2678 32 0 0 chr2 119202309 119202618 -134053965 + AluYa5 SINE Alu 1 309 -2 7930 242 44 19 chr2 119202618 119204159 -134052424 + L1PA15 LINE L1 3022 4524 -2273 7000 196 13 9 chr2 119204261 119206595 -134049988 + L1PA15 LINE L1 4455 6816 0 395 266 198 24 chr2 119206673 119206880 -134049703 - L2 LINE L2 -797 2517 2275 187 313 47 0 chr2 119207056 119207120 -134049463 + L3 LINE CR1 1509 1575 -2 541 314 162 38 chr2 119207423 119207738 -134048845 - MLT1G LTR MaLR -196 394 41 558 287 128 29 chr2 119208494 119208908 -134047675 + Charlie2a DNA MER1_type 22 476 -2386 * 712 260 55 0 chr2 119208895 119209130 -134047453 + Charlie2a DNA MER1_type 725 972 -1890 340 219 21 10 chr2 119209162 119209258 -134047325 + Charlie2a DNA MER1_type 2749 2845 -17 265 341 43 49 chr2 119209298 119209462 -134047121 + L2 LINE L2 3110 3272 0 2380 179 50 74 chr2 119209675 119209940 -134046643 - L1MB7 LINE L1 0 6184 5914 1955 144 11 0 chr2 119209940 119210224 -134046359 - AluSx SINE Alu -25 287 1 2380 179 50 74 chr2 119210224 119210596 -134045987 - L1MB7 LINE L1 -270 5914 5562 954 219 42 33 chr2 119210604 119210787 -134045796 - L1MB7 LINE L1 -749 5397 5217 2017 110 59 0 chr2 119210787 119211077 -134045506 - AluSg SINE Alu -3 307 1 2335 65 48 0 chr2 119211085 119211378 -134045205 - AluY SINE Alu -4 307 1 954 219 42 33 chr2 119211378 119211491 -134045092 - L1MB7 LINE L1 -935 5211 5089 739 200 0 0 chr2 119211505 119211635 -134044948 - FLAM_C SINE Alu -2 131 2 1910 145 3 3 chr2 119211870 119212166 -134044417 + AluSx SINE Alu 15 310 -2 221 0 0 33 chr2 119212405 119212435 -134044148 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 2266 99 0 3 chr2 119212542 119212845 -134043738 + AluSg SINE Alu 1 302 -8 425 223 21 21 chr2 119212857 119212951 -134043632 - MER5A DNA MER1_type -86 103 10 2270 81 10 0 chr2 119214578 119214874 -134041709 - AluY SINE Alu -12 299 1 1247 170 75 77 chr2 119214998 119215344 -134041239 - MER4A LTR ERV1 0 664 261 284 67 22 22 chr2 119215344 119215389 -134041194 - MER4A LTR ERV1 -566 98 54 2318 138 57 31 chr2 119215417 119215838 -134040745 - MSTB1 LTR MaLR 0 432 1 4894 255 47 52 chr2 119215838 119216653 -134039930 - MSTB1-int LTR MaLR 0 1580 762 5481 157 24 31 chr2 119216653 119217732 -134038851 - MER11C LTR ERVK 0 1071 1 4894 255 47 52 chr2 119217732 119218340 -134038243 - MSTB1-int LTR MaLR -818 762 163 2064 193 40 12 chr2 119218340 119218760 -134037823 - MSTB1 LTR MaLR 0 432 1 4894 255 47 52 chr2 119218760 119218921 -134037662 - MSTB1-int LTR MaLR -1417 163 3 2132 178 24 19 chr2 119218935 119219352 -134037231 - MSTB1 LTR MaLR -13 419 1 250 316 68 8 chr2 119219403 119219520 -134037063 + MIR SINE MIR 28 151 -111 670 197 55 33 chr2 119219534 119219717 -134036866 - MER53 DNA DNA -1 188 2 642 216 120 0 chr2 119219800 119219967 -134036616 + MER5A DNA MER1_type 3 189 0 1690 235 53 31 chr2 119219988 119220536 -134036047 + L1ME3 LINE L1 5595 6154 -8 211 376 65 0 chr2 119220827 119220920 -134035663 - L2 LINE L2 -35 3237 3139 698 250 68 0 chr2 119221447 119221623 -134034960 - MER5A DNA MER1_type -1 188 1 2368 159 2 44 chr2 119221889 119222341 -134034242 - Tigger2a DNA MER2_type 0 434 2 237 65 0 0 chr2 119222342 119222373 -134034210 + (TG)n Simple_repeat Simple_repeat 2 32 0 309 346 10 0 chr2 119222692 119222793 -134033790 - L2 LINE L2 -2 3270 3169 180 250 0 23 chr2 119223420 119223464 -134033119 + MER5B DNA MER1_type 61 103 -75 * 194 290 9 112 chr2 119223449 119223556 -134033027 - MER5A DNA MER1_type -75 114 19 191 296 83 83 chr2 119223552 119223660 -134032923 + MER5B DNA MER1_type 12 119 -59 * 199 27 27 54 chr2 119223693 119223730 -134032853 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 2578 84 8 3 chr2 119223730 119224087 -134032496 - L1PB1 LINE L1 -11 6140 5782 278 210 99 0 chr2 119224088 119224169 -134032414 - L1MC4 LINE L1 -1339 6703 6615 3305 171 11 14 chr2 119224174 119225147 -134031436 - L1P5 LINE L1 -361 5790 4818 692 110 0 0 chr2 119225440 119225531 -134031052 + 5S rRNA rRNA 2 92 -29 181 255 59 0 chr2 119225541 119225592 -134030991 - MER5B DNA MER1_type -124 54 1 1058 148 16 0 chr2 119226812 119226995 -134029588 - Tigger2 DNA MER2_type -166 2552 2367 22 0 0 0 chr2 119229100 119229122 -134027461 + AT_rich Low_complexity Low_complexity 1 22 0 2230 103 0 0 chr2 119229557 119229849 -134026734 + AluY SINE Alu 1 292 -19 317 318 0 0 chr2 119229849 119229937 -134026646 + L1MC4 LINE L1 6615 6702 -1340 * 359 289 0 0 chr2 119229858 119229948 -134026635 - L1MC4 LINE L1 -1339 6703 6614 234 150 0 0 chr2 119229948 119229988 -134026595 + (TA)n Simple_repeat Simple_repeat 2 41 0 3750 77 0 25 chr2 119230464 119230844 -134025739 - L1PA7 LINE L1 0 6154 5789 2283 109 0 0 chr2 119230844 119231137 -134025446 - AluSg SINE Alu -17 293 1 3750 77 0 25 chr2 119231137 119231279 -134025304 - L1PA7 LINE L1 -365 5789 5645 414 270 258 32 chr2 119231282 119231682 -134024901 - L1ME4a LINE L1 -3 6118 5629 1749 222 47 24 chr2 119232448 119233087 -134023496 + L1MC/D LINE L1 4783 5433 -743 2198 111 0 3 chr2 119233098 119233404 -134023179 + AluSq SINE Alu 1 305 -8 2200 173 151 2 chr2 119233412 119233914 -134022669 + L1MC3 LINE L1 7206 7782 -3 597 144 93 7 chr2 119233922 119234061 -134022522 + L1MB2 LINE L1 6018 6168 -3 21 0 0 0 chr2 119234062 119234083 -134022500 + AT_rich Low_complexity Low_complexity 1 21 0 907 286 54 27 chr2 119234119 119234636 -134021947 - L1M4 LINE L1 -2251 3895 3365 603 349 52 39 chr2 119235380 119235923 -134020660 - L1MEd LINE L1 -1031 1459 820 24 0 0 0 chr2 119236108 119236132 -134020451 + AT_rich Low_complexity Low_complexity 1 24 0 1720 155 45 58 chr2 119236287 119236492 -134020091 - THE1C LTR MaLR 0 375 176 2298 91 0 0 chr2 119236492 119236788 -134019795 - AluSg SINE Alu -14 296 1 1720 155 45 58 chr2 119236788 119236962 -134019621 - THE1C LTR MaLR -199 176 1 663 242 28 34 chr2 119237039 119237217 -134019366 - MER5A DNA MER1_type -6 183 7 453 202 0 0 chr2 119287950 119288044 -133968539 - L1MA9 LINE L1 -3 6309 6216 578 165 9 184 chr2 119289247 119289392 -133967191 - MER5A DNA MER1_type 0 189 20 2228 77 9 52 chr2 119289392 119289717 -133966866 - AluSp SINE Alu -2 311 1 578 165 9 184 chr2 119289717 119289767 -133966816 - MER5A DNA MER1_type -169 20 32 2064 171 3 27 chr2 119289767 119290141 -133966442 - MLT1A1 LTR MaLR 0 365 1 578 165 9 184 chr2 119290141 119290162 -133966421 - MER5A DNA MER1_type -156 33 10 30 27 0 0 chr2 119290327 119290364 -133966219 + AT_rich Low_complexity Low_complexity 1 37 0 2061 128 0 3 chr2 119290982 119291280 -133965303 - AluSg SINE Alu -13 297 1 1478 192 19 35 chr2 119291521 119291834 -133964749 - AluJo SINE Alu -1 311 4 225 83 0 0 chr2 119291836 119291872 -133964711 + (A)n Simple_repeat Simple_repeat 1 36 0 32 26 0 0 chr2 119291886 119291925 -133964658 + AT_rich Low_complexity Low_complexity 1 39 0 200 241 76 76 chr2 119293032 119293111 -133963472 + L2 LINE L2 3179 3257 -15 951 87 0 22 chr2 119293676 119293814 -133962769 - LTR19A LTR ERV1 0 486 352 1262 213 73 14 chr2 119294596 119294883 -133961700 - AluJo SINE Alu -6 306 3 256 317 0 0 chr2 119295987 119296047 -133960536 - L3 LINE CR1 -3 1574 1515 234 0 0 0 chr2 119296503 119296529 -133960054 + (A)n Simple_repeat Simple_repeat 1 26 0 216 0 0 0 chr2 119296631 119296655 -133959928 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1909 118 0 4 chr2 119296655 119296927 -133959656 - AluSx SINE Alu -41 271 1 24 0 0 0 chr2 119296974 119296998 -133959585 + AT_rich Low_complexity Low_complexity 1 24 0 2123 88 44 7 chr2 119297275 119297572 -133959011 + AluYa5 SINE Alu 4 311 0 959 309 90 73 chr2 119297581 119297793 -133958790 - L2 LINE L2 -1209 2105 1898 1512 176 57 69 chr2 119297793 119298230 -133958353 + MSTB1 LTR MaLR 1 432 0 959 309 90 73 chr2 119298230 119298337 -133958246 - L2 LINE L2 -1416 1898 1794 2088 145 0 0 chr2 119298337 119298648 -133957935 + AluSq SINE Alu 1 311 -2 959 309 90 73 chr2 119298648 119299036 -133957547 - L2 LINE L2 -1520 1794 1385 216 327 59 30 chr2 119299051 119299253 -133957330 - L2 LINE L2 -2175 1139 932 240 111 0 0 chr2 119299361 119299397 -133957186 + (TTA)n Simple_repeat Simple_repeat 2 37 0 530 259 36 0 chr2 119299434 119299546 -133957037 + MER5A DNA MER1_type 11 126 -63 215 282 155 14 chr2 119299965 119300107 -133956476 + L2 LINE L2 3150 3311 -2 517 241 17 0 chr2 119301180 119301296 -133955287 + MLT1J2 LTR MaLR 45 162 -288 1747 182 55 0 chr2 119304628 119304957 -133951626 + Tigger3(Golem) DNA MER2_type 2 348 -2681 560 84 12 0 chr2 119304957 119305040 -133951543 + AluY SINE Alu 1 84 -226 2700 132 105 77 chr2 119305141 119305617 -133950966 + Tigger3(Golem) DNA MER2_type 2385 2885 -144 2005 121 37 0 chr2 119305617 119305915 -133950668 - AluSx SINE Alu -3 309 1 2700 132 105 77 chr2 119305915 119306065 -133950518 + Tigger3(Golem) DNA MER2_type 2885 3029 0 24 32 0 0 chr2 119306080 119306111 -133950472 + AT_rich Low_complexity Low_complexity 1 31 0 2152 100 7 20 chr2 119306251 119306552 -133950031 - AluSq SINE Alu -16 297 1 258 32 0 0 chr2 119306846 119306877 -133949706 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2042 139 0 0 chr2 119306879 119307159 -133949424 - AluSx SINE Alu -32 280 1 275 266 186 0 chr2 119307215 119307467 -133949116 - HAL1b LINE L1 -231 1117 819 1608 248 65 53 chr2 119307482 119308184 -133948399 - HAL1b LINE L1 -567 781 71 775 206 30 0 chr2 119309355 119309520 -133947063 + MER3 DNA MER1_type 1 123 -86 197 195 0 24 chr2 119309569 119309610 -133946973 - MER5A DNA MER1_type -148 41 2 256 295 0 0 chr2 119309948 119310009 -133946574 - MIR3 SINE MIR -7 201 141 243 0 0 0 chr2 119310465 119310492 -133946091 + (A)n Simple_repeat Simple_repeat 1 27 0 216 0 0 0 chr2 119310593 119310617 -133945966 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1922 114 0 4 chr2 119310617 119310889 -133945694 - AluSx SINE Alu -41 271 1 24 0 0 0 chr2 119310936 119310960 -133945623 + AT_rich Low_complexity Low_complexity 1 24 0 338 239 43 8 chr2 119311289 119311406 -133945177 + GA-rich Low_complexity Low_complexity 2 122 0 181 294 88 59 chr2 119311416 119311518 -133945065 - L3 LINE CR1 -1197 380 276 490 333 122 61 chr2 119311549 119312090 -133944493 + MLT1K LTR MaLR 13 586 -2 252 321 83 18 chr2 119312243 119312352 -133944231 + L2 LINE L2 3142 3257 -15 243 86 17 35 chr2 119312390 119312448 -133944135 + (TA)n Simple_repeat Simple_repeat 1 57 0 1650 191 3 0 chr2 119312501 119312783 -133943800 + AluJb SINE Alu 3 285 -27 300 280 0 0 chr2 119313857 119313932 -133942651 - MIR SINE MIR -32 230 156 195 273 40 71 chr2 119313940 119314039 -133942544 - L2 LINE L2 -340 2974 2879 44 35 0 0 chr2 119314214 119314272 -133942311 + AT_rich Low_complexity Low_complexity 1 58 0 429 20 0 0 chr2 119314317 119314367 -133942216 + (TG)n Simple_repeat Simple_repeat 1 50 0 6799 77 14 3 chr2 119314562 119315622 -133940961 - L1PA10 LINE L1 -2 6166 5109 2849 124 5 0 chr2 119315622 119316058 -133940525 + L1PA10 LINE L1 4658 5095 -1051 226 163 23 0 chr2 119316307 119316350 -133940233 + T-rich Low_complexity Low_complexity 5 48 0 200 108 0 27 chr2 119317801 119317838 -133938745 + (TG)n Simple_repeat Simple_repeat 2 37 0 21 0 0 0 chr2 119318717 119318738 -133937845 + AT_rich Low_complexity Low_complexity 1 21 0 2085 192 44 6 chr2 119318953 119319433 -133937150 - L1MA9 LINE L1 0 6312 5815 180 0 0 0 chr2 119319438 119319458 -133937125 + (TTTTTG)n Simple_repeat Simple_repeat 3 22 0 264 59 0 0 chr2 119319481 119319515 -133937068 + (A)n Simple_repeat Simple_repeat 1 34 0 19816 97 2 12 chr2 119319633 119323021 -133933562 + L1PA3 LINE L1 2474 6152 -3 21 0 0 0 chr2 119323021 119323042 -133933541 + AT_rich Low_complexity Low_complexity 1 21 0 6089 58 1 1 chr2 119323050 119323819 -133932764 + L1PA5 LINE L1 5386 6154 0 6433 69 6 8 chr2 119323819 119324667 -133931916 + L1PA7 LINE L1 5293 6143 -11 23 33 0 0 chr2 119325051 119325081 -133931502 + AT_rich Low_complexity Low_complexity 1 30 0 13717 193 19 13 chr2 119325089 119329962 -133926621 + L1PB1 LINE L1 1882 6859 -8 887 222 106 7 chr2 119329992 119330294 -133926289 - L1MEc LINE L1 -4017 2379 2048 591 189 0 0 chr2 119330307 119330434 -133926149 - L1MA4 LINE L1 0 6300 6174 26 30 0 0 chr2 119330611 119330644 -133925939 + AT_rich Low_complexity Low_complexity 1 33 0 545 297 42 48 chr2 119330689 119331028 -133925555 + L1ME LINE L1 5487 5822 -299 1208 198 35 86 chr2 119331262 119331576 -133925007 - AluJo SINE Alu -4 298 1 1642 124 0 8 chr2 119331576 119331818 -133924765 - AluSx SINE Alu -15 297 58 23 0 0 0 chr2 119331830 119331853 -133924730 + AT_rich Low_complexity Low_complexity 1 23 0 1909 141 0 26 chr2 119332274 119332586 -133923997 - AluJb SINE Alu -8 304 1 838 300 30 17 chr2 119333401 119333638 -133922945 - MIR SINE MIR -10 252 13 589 239 0 0 chr2 119334190 119334323 -133922260 + FLAM_A SINE Alu 1 133 0 952 317 61 50 chr2 119334369 119335254 -133921329 + L2 LINE L2 2430 3312 -1 2166 109 0 29 chr2 119336446 119336759 -133919824 - AluSx SINE Alu -8 304 1 229 231 15 0 chr2 119336814 119336879 -133919704 + L1ME1 LINE L1 6096 6161 -5 261 317 0 0 chr2 119337134 119337216 -133919367 + CT-rich Low_complexity Low_complexity 4 85 0 2558 33 0 3 chr2 119337484 119337783 -133918800 - AluY SINE Alu -13 298 1 213 311 81 0 chr2 119339226 119339300 -133917283 - L2 LINE L2 -565 2749 2670 321 73 15 44 chr2 119340060 119340128 -133916455 + (TCTA)n Simple_repeat Simple_repeat 4 69 0 5862 160 22 32 chr2 119340336 119341540 -133915043 - L1MA4 LINE L1 -461 7258 6075 1916 157 3 3 chr2 119341540 119341852 -133914731 - AluSx SINE Alu 0 312 1 5862 160 22 32 chr2 119341852 119342401 -133914182 - L1MA4 LINE L1 -1644 6075 5522 5873 227 49 21 chr2 119342405 119344641 -133911942 - L1MA4 LINE L1 -2272 5293 2847 247 147 73 0 chr2 119344640 119344708 -133911875 - L1MA4 LINE L1 -4552 2013 1941 * 783 222 32 18 chr2 119344701 119344922 -133911661 - L1MEc LINE L1 -5610 786 563 896 267 81 86 chr2 119344925 119345367 -133911216 - L1MEc LINE L1 -5917 479 40 2067 102 17 0 chr2 119345489 119345783 -133910800 - L1PA11 LINE L1 0 6174 5876 1045 74 61 31 chr2 119345783 119345946 -133910637 + L1P4 LINE L1 5496 5663 -511 21 0 0 0 chr2 119346713 119346734 -133909849 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 119347559 119347580 -133909003 + AT_rich Low_complexity Low_complexity 1 21 0 2212 103 6 13 chr2 119347615 119347927 -133908656 + AluSx SINE Alu 1 310 -2 413 304 55 32 chr2 119348057 119348277 -133908306 - MIR SINE MIR -1 261 37 227 305 164 53 chr2 119348381 119348715 -133907868 + L2 LINE L2 1608 1903 -1411 899 207 0 0 chr2 119348715 119348879 -133907704 - FRAM SINE Alu 0 166 3 227 305 164 53 chr2 119348879 119348904 -133907679 + L2 LINE L2 1903 1924 -1390 2307 108 3 0 chr2 119348904 119349211 -133907372 - AluSc SINE Alu -1 308 1 227 305 164 53 chr2 119349211 119349569 -133907014 + L2 LINE L2 1924 2406 -908 263 227 15 0 chr2 119349631 119349697 -133906886 + MIR SINE MIR 191 257 -5 307 340 88 0 chr2 119350712 119350859 -133905724 + MIR SINE MIR 103 262 0 2025 125 35 35 chr2 119351008 119351383 -133905200 - THE1C LTR MaLR 0 375 1 348 354 63 13 chr2 119352560 119352718 -133903865 + MER5A DNA MER1_type 1 166 -23 2201 76 0 24 chr2 119353257 119353593 -133902990 - AluY SINE Alu 0 329 1 600 315 39 27 chr2 119353654 119353911 -133902672 - MIR SINE MIR 0 262 3 2235 144 77 12 chr2 119354846 119355115 -133901468 + MSTA LTR MaLR 1 306 -122 2208 106 20 0 chr2 119355115 119355416 -133901167 + AluSx SINE Alu 2 308 -4 2235 144 77 12 chr2 119355416 119355548 -133901035 + MSTA LTR MaLR 306 428 0 204 135 0 0 chr2 119356272 119356309 -133900274 + (T)n Simple_repeat Simple_repeat 1 37 0 280 318 206 12 chr2 119356361 119356531 -133900052 + MIR SINE MIR 49 251 -11 1733 170 10 0 chr2 119356555 119356844 -133899739 - AluSx SINE Alu -20 292 1 1375 116 5 0 chr2 119358176 119358391 -133898192 - L1MA3 LINE L1 0 6305 6090 2117 123 42 107 chr2 119358391 119358634 -133897949 - MSTA LTR MaLR -1 427 226 462 133 0 95 chr2 119358634 119358739 -133897844 - L1PA11 LINE L1 -4 6170 6076 2117 123 42 107 chr2 119358739 119358952 -133897631 - MSTA LTR MaLR -202 226 1 3220 117 10 18 chr2 119358953 119359465 -133897118 - L1MA3 LINE L1 -211 6094 5587 1563 162 27 27 chr2 119359465 119359793 -133896790 - L1M1 LINE L1 -4689 2876 2549 * 1997 182 17 6 chr2 119359792 119360143 -133896440 - L1M1 LINE L1 -7191 374 20 336 24 0 0 chr2 119360275 119360316 -133896267 + (TG)n Simple_repeat Simple_repeat 2 42 0 32 26 0 0 chr2 119361132 119361171 -133895412 + AT_rich Low_complexity Low_complexity 1 39 0 21 36 0 0 chr2 119361209 119361237 -133895346 + AT_rich Low_complexity Low_complexity 1 28 0 627 356 61 11 chr2 119362663 119363025 -133893558 + L2 LINE L2 2487 2866 -448 23 33 0 0 chr2 119363390 119363420 -133893163 + AT_rich Low_complexity Low_complexity 1 30 0 193 245 0 20 chr2 119363643 119363692 -133892891 - MIR SINE MIR -15 247 200 4112 243 45 39 chr2 119364422 119365741 -133890842 + L1MB5 LINE L1 11 1337 -5205 699 185 56 60 chr2 119365775 119366024 -133890559 + L1MB5 LINE L1 1916 2163 -4483 1217 169 73 22 chr2 119366092 119366365 -133890218 + L1MA9 LINE L1 6026 6312 0 4021 224 26 6 chr2 119366385 119367048 -133889535 + L1MB5 LINE L1 5316 5964 -708 2274 108 0 0 chr2 119367048 119367353 -133889230 + AluSx SINE Alu 1 305 -7 4021 224 26 6 chr2 119367353 119367984 -133888599 + L1MB5 LINE L1 5964 6636 -36 28 29 0 0 chr2 119369179 119369214 -133887369 + AT_rich Low_complexity Low_complexity 1 35 0 196 347 57 32 chr2 119369411 119369535 -133887048 + MIR3 SINE MIR 50 176 -32 193 298 86 66 chr2 119369778 119369929 -133886654 - L2 LINE L2 -245 3068 2915 22 0 0 0 chr2 119370046 119370068 -133886515 + AT_rich Low_complexity Low_complexity 1 22 0 237 65 0 0 chr2 119370423 119370454 -133886129 + (TG)n Simple_repeat Simple_repeat 2 32 0 2193 221 23 30 chr2 119370963 119371031 -133885552 + L1M4 LINE L1 3347 3414 -3230 2399 63 0 10 chr2 119371031 119371333 -133885250 - AluY SINE Alu -12 299 1 2193 221 23 30 chr2 119371333 119371957 -133884626 + L1M4 LINE L1 3414 4034 -2610 3127 83 153 4 chr2 119371957 119372439 -133884144 - MER41A LTR ERV1 0 554 1 8589 181 21 21 chr2 119372439 119374934 -133881649 + L1MA7 LINE L1 4031 6525 -264 3059 109 5 0 chr2 119374934 119375365 -133881218 - MER57B LTR ERV1 0 434 2 8589 181 21 21 chr2 119375365 119375630 -133880953 + L1MA7 LINE L1 6525 6789 0 820 114 8 0 chr2 119376002 119376125 -133880458 - AluSg/x SINE Alu -5 305 182 2992 209 26 4 chr2 119376133 119376895 -133879688 - L1MB8 LINE L1 -9 6169 5279 180 0 0 0 chr2 119377317 119377337 -133879246 + (TA)n Simple_repeat Simple_repeat 1 20 0 2384 102 3 9 chr2 119377989 119378304 -133878279 - AluSp SINE Alu 0 313 1 273 109 0 0 chr2 119378376 119378422 -133878161 + (TG)n Simple_repeat Simple_repeat 1 46 0 203 158 0 0 chr2 119378525 119378563 -133878020 + (TG)n Simple_repeat Simple_repeat 1 38 0 221 319 97 0 chr2 119378591 119378663 -133877920 + L2 LINE L2 3169 3247 -25 1904 116 0 0 chr2 119378663 119378931 -133877652 + AluSx SINE Alu 42 309 -3 1150 293 126 15 chr2 119381211 119382077 -133874506 - L2 LINE L2 -1 3312 2346 231 36 0 0 chr2 119382077 119382105 -133874478 + (TTTC)n Simple_repeat Simple_repeat 2 29 0 1972 115 7 0 chr2 119382107 119382386 -133874197 - AluSq SINE Alu -32 281 1 22 0 0 0 chr2 119382936 119382958 -133873625 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr2 119382995 119383020 -133873563 + AT_rich Low_complexity Low_complexity 1 25 0 243 0 0 0 chr2 119385489 119385516 -133871067 + (TA)n Simple_repeat Simple_repeat 1 27 0 184 98 24 24 chr2 119386238 119386279 -133870304 + (TAGA)n Simple_repeat Simple_repeat 1 41 0 476 243 73 69 chr2 119386911 119387129 -133869454 + MLT1H LTR MaLR 118 336 -213 22 0 0 0 chr2 119387508 119387530 -133869053 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr2 119388415 119388438 -133868145 + AT_rich Low_complexity Low_complexity 1 23 0 2334 87 3 3 chr2 119388611 119388909 -133867674 + AluSc SINE Alu 2 299 -10 2070 119 0 14 chr2 119389133 119389428 -133867155 + AluSc SINE Alu 18 308 -1 2123 158 45 3 chr2 119389681 119390060 -133866523 - Tigger4(Zombi) DNA MER2_type -2 2729 2335 396 289 56 50 chr2 119390723 119390903 -133865680 - MLT1E2 LTR MaLR -335 291 111 479 226 16 40 chr2 119390996 119391120 -133865463 + L2 LINE L2 3193 3313 0 190 336 159 24 chr2 119391214 119391553 -133865030 + L2 LINE L2 2590 2974 -340 6466 199 15 19 chr2 119393187 119395450 -133861133 + L1PA15 LINE L1 3865 6165 0 23 33 0 0 chr2 119395757 119395787 -133860796 + AT_rich Low_complexity Low_complexity 1 30 0 1024 216 94 0 chr2 119396015 119396269 -133860314 + L1MA4 LINE L1 5913 6190 -110 * 19894 45 29 2 chr2 119396263 119399055 -133857528 + L1PA3 LINE L1 1 2915 -3231 14103 29 2 1 chr2 119399055 119401504 -133855079 + L1PA3 LINE L1 3708 6155 0 1152 67 0 0 chr2 119401547 119401697 -133854886 + L1PA7 LINE L1 6001 6150 -4 292 192 0 27 chr2 119401697 119401770 -133854813 + L1MA4 LINE L1 6187 6257 -43 24 67 0 0 chr2 119401781 119401826 -133854757 + AT_rich Low_complexity Low_complexity 1 45 0 198 103 0 0 chr2 119402444 119402473 -133854110 + (TA)n Simple_repeat Simple_repeat 2 30 0 1899 238 79 18 chr2 119402926 119403547 -133853036 - L1M4 LINE L1 -3227 2919 2261 1005 176 0 6 chr2 119403560 119403742 -133852841 + L1PBa LINE L1 3 183 -6680 5969 131 159 16 chr2 119403742 119404850 -133851733 + L1PBa LINE L1 625 1890 -4973 4139 112 3 0 chr2 119404854 119405462 -133851121 - L1PBa LINE L1 -3942 2920 2311 732 120 17 0 chr2 119405461 119405578 -133851005 + L1PBa LINE L1 2919 3037 -3825 * 2468 74 94 12 chr2 119405702 119406105 -133850478 - LTR19A LTR ERV1 -50 436 1 360 284 99 70 chr2 119407035 119407278 -133849305 - MIR SINE MIR -2 260 11 231 255 0 0 chr2 119408627 119408678 -133847905 + L2 LINE L2 3263 3313 0 433 267 0 0 chr2 119409840 119409945 -133846638 - MER58 DNA MER1_type 0 2420 2316 359 273 20 20 chr2 119409955 119410054 -133846529 - MER58 DNA MER1_type -242 99 1 711 130 0 0 chr2 119410635 119410743 -133845840 - AluSg/x SINE Alu -7 302 195 525 259 53 0 chr2 119411219 119411350 -133845233 - MER58A DNA MER1_type -45 179 42 213 39 0 0 chr2 119411606 119411632 -133844951 + (CATATA)n Simple_repeat Simple_repeat 1 26 0 317 191 0 16 chr2 119411634 119411697 -133844886 - Tigger5 DNA MER2_type 0 2323 2262 282 237 0 0 chr2 119411682 119411741 -133844842 + Tigger5 DNA MER2_type 2262 2320 -3 * 273 239 30 0 chr2 119411741 119411807 -133844776 - Tigger5 DNA MER2_type -2245 78 11 870 108 0 0 chr2 119412149 119412269 -133844314 + AluSg/x SINE Alu 172 291 -19 292 319 0 0 chr2 119412269 119412360 -133844223 - L1MC4 LINE L1 -164 7878 7788 1468 205 7 4 chr2 119412728 119413006 -133843577 - AluJb SINE Alu -31 281 3 218 250 0 0 chr2 119414006 119414050 -133842533 + (TG)n Simple_repeat Simple_repeat 2 45 0 266 219 146 0 chr2 119414371 119414453 -133842130 + MIR SINE MIR 109 202 -60 21 0 0 0 chr2 119415599 119415620 -133840963 + AT_rich Low_complexity Low_complexity 1 21 0 405 211 0 13 chr2 119415814 119415890 -133840693 - L1MC/D LINE L1 -2203 5605 5531 372 243 14 28 chr2 119415909 119416053 -133840530 - L1MC/D LINE L1 -2329 5479 5338 411 83 0 0 chr2 119416501 119416561 -133840022 + (TC)n Simple_repeat Simple_repeat 2 61 0 1486 161 10 62 chr2 119416562 119416867 -133839716 - AluJb SINE Alu -23 289 1 550 256 95 68 chr2 119417867 119418278 -133838305 + Charlie8 DNA MER1_type 96 517 -1900 181 325 26 39 chr2 119418793 119418870 -133837713 + L2 LINE L2 3004 3079 -193 198 298 12 60 chr2 119418950 119419034 -133837549 + L2 LINE L2 3234 3313 0 2723 99 5 12 chr2 119419543 119419955 -133836628 - L1PB1 LINE L1 -445 5706 5298 2399 167 2 0 chr2 119419952 119420348 -133836235 + L1PB1 LINE L1 5713 6109 -42 * 636 174 33 0 chr2 119420455 119420576 -133836007 + Tigger1 DNA MER2_type 1345 1469 -949 * 3692 155 35 11 chr2 119420572 119420861 -133835722 + Tigger1 DNA MER2_type 1635 1916 -502 3192 92 22 11 chr2 119420861 119421309 -133835274 - MLT2A2 LTR ERVL 0 453 1 3692 155 35 11 chr2 119421309 119421682 -133834901 + Tigger1 DNA MER2_type 1916 2313 -105 281 98 0 0 chr2 119421684 119421725 -133834858 - L1PA7 LINE L1 -11 6143 6103 1438 79 0 0 chr2 119421838 119422016 -133834567 + AluSg/x SINE Alu 110 287 -25 1873 117 0 89 chr2 119422194 119422520 -133834063 + AluSx SINE Alu 1 297 -15 252 0 0 0 chr2 119423534 119423562 -133833021 + (CA)n Simple_repeat Simple_repeat 2 29 0 329 377 45 20 chr2 119423781 119423980 -133832603 + MIR SINE MIR 59 262 0 1552 170 67 7 chr2 119426154 119426437 -133830146 + AluJb SINE Alu 1 300 -12 2057 109 0 38 chr2 119426674 119426987 -133829596 + AluY SINE Alu 1 301 -10 573 180 31 8 chr2 119429401 119429538 -133827045 + L1P5 LINE L1 5457 5586 -570 458 178 30 10 chr2 119429528 119429629 -133826954 + L1P5 LINE L1 5485 5587 -569 * 1743 189 16 32 chr2 119429729 119430100 -133826483 - MER4D LTR ERV1 -507 365 1 384 200 0 0 chr2 119430411 119430491 -133826092 + (TATATG)n Simple_repeat Simple_repeat 3 82 0 485 141 0 0 chr2 119430492 119430563 -133826020 - Alu SINE Alu -12 298 228 346 156 0 0 chr2 119430567 119430631 -133825952 + AluSp/q SINE Alu 240 303 0 195 300 44 33 chr2 119430699 119430789 -133825794 - MIR SINE MIR -6 256 166 275 352 21 7 chr2 119430881 119431026 -133825557 - MIR SINE MIR -96 166 20 2394 67 0 3 chr2 119431644 119431942 -133824641 - AluY SINE Alu -14 297 1 997 230 14 0 chr2 119431944 119432157 -133824426 + MER92B LTR ERV1 4 219 -417 351 329 71 68 chr2 119432596 119432936 -133823647 + MER102b DNA MER1_type 1 341 0 188 333 0 16 chr2 119433629 119433692 -133822891 + MER5A DNA MER1_type 128 189 0 254 281 0 16 chr2 119433988 119434052 -133822531 + MIR3 SINE MIR 123 185 -23 26 50 0 0 chr2 119434316 119434356 -133822227 + AT_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr2 119434924 119434945 -133821638 + AT_rich Low_complexity Low_complexity 1 21 0 225 361 46 19 chr2 119435158 119435266 -133821317 - MLT1L LTR MaLR -150 465 355 2090 121 0 0 chr2 119435409 119435722 -133820861 + AluSg SINE Alu 1 313 0 1637 201 56 17 chr2 119435736 119436095 -133820488 + MLT1A2 LTR MaLR 1 373 -1 788 292 10 5 chr2 119436226 119436435 -133820148 + HERV16 LTR ERVL 2712 2921 -2075 1772 184 7 0 chr2 119438189 119438488 -133818095 + AluJb SINE Alu 3 303 -9 657 140 30 135 chr2 119438631 119438761 -133817822 - MER4D LTR ERV1 -7 896 754 1786 134 35 32 chr2 119438761 119439065 -133817518 + AluSx SINE Alu 1 305 0 657 140 30 135 chr2 119439065 119439216 -133817367 - MER4D LTR ERV1 -149 754 502 666 330 107 20 chr2 119439963 119440466 -133816117 + MLT1H1 LTR MaLR 1 547 -8 836 112 11 117 chr2 119440760 119440897 -133815686 + L1MA3 LINE L1 6135 6248 -57 1320 202 3 77 chr2 119440897 119441233 -133815350 + AluJb SINE Alu 1 311 -1 836 112 11 117 chr2 119441233 119441283 -133815300 + L1MA3 LINE L1 6248 6302 -3 21 0 0 0 chr2 119441283 119441304 -133815279 + AT_rich Low_complexity Low_complexity 1 21 0 1156 263 76 16 chr2 119441332 119441712 -133814871 + L1ME1 LINE L1 5759 6161 -5 204 302 0 32 chr2 119442814 119442877 -133813706 + GA-rich Low_complexity Low_complexity 5 65 0 424 69 23 103 chr2 119443534 119443583 -133813000 - MADE1 DNA Mariner 0 80 39 1810 115 3 59 chr2 119443583 119443869 -133812714 + AluSx SINE Alu 30 299 -13 424 69 23 103 chr2 119443869 119443906 -133812677 - MADE1 DNA Mariner -41 39 1 21 36 0 0 chr2 119444552 119444580 -133812003 + AT_rich Low_complexity Low_complexity 1 28 0 233 218 90 26 chr2 119445903 119445981 -133810602 + MER103 DNA DNA 2 84 -82 3785 149 8 0 chr2 119446383 119447006 -133809577 - L1PA16 LINE L1 -2 6164 5537 596 274 0 0 chr2 119447016 119447169 -133809414 + L1P LINE L1 4834 4986 -1160 23 33 0 0 chr2 119447945 119447975 -133808608 + AT_rich Low_complexity Low_complexity 1 30 0 247 276 28 18 chr2 119448201 119448278 -133808305 - MIR SINE MIR -67 141 69 334 312 57 13 chr2 119448449 119448606 -133807977 - MIR SINE MIR -34 228 65 661 268 47 19 chr2 119448645 119448858 -133807725 - MER20 DNA MER1_type 0 219 1 2127 114 3 3 chr2 119448995 119449292 -133807291 - AluSx SINE Alu -10 302 6 387 264 126 46 chr2 119449294 119449468 -133807115 + L2 LINE L2 3109 3296 -17 239 156 0 31 chr2 119449848 119449912 -133806671 - AluS SINE Alu -246 62 1 1154 214 18 28 chr2 119449944 119450260 -133806323 + AluJb SINE Alu 1 313 0 2070 177 81 5 chr2 119451043 119451248 -133805335 + MSTB LTR MaLR 1 189 -237 315 0 0 0 chr2 119451248 119451283 -133805300 + (TC)n Simple_repeat Simple_repeat 1 35 0 2070 177 81 5 chr2 119451283 119451473 -133805110 + MSTB LTR MaLR 189 426 0 727 333 101 22 chr2 119451591 119452484 -133804099 + HERVL LTR ERVL 3165 4103 -1551 305 143 0 32 chr2 119452523 119452586 -133803997 + (CATA)n Simple_repeat Simple_repeat 2 62 0 189 0 0 0 chr2 119452640 119452661 -133803922 + (TG)n Simple_repeat Simple_repeat 2 22 0 1536 182 10 37 chr2 119452661 119452958 -133803625 - AluJo SINE Alu -23 289 1 423 366 5 10 chr2 119452958 119453185 -133803398 + HERVL LTR ERVL 4231 4432 -1222 435 324 62 89 chr2 119456010 119456346 -133800237 - L2 LINE L2 -11 3261 2935 315 259 65 53 chr2 119456413 119456583 -133800000 - L2 LINE L2 -461 2853 2682 2264 91 3 0 chr2 119456740 119457047 -133799536 - AluY SINE Alu -3 308 1 440 331 75 7 chr2 119457709 119457891 -133798692 - MIR SINE MIR -65 143 3 180 0 0 0 chr2 119458528 119458548 -133798035 + (TA)n Simple_repeat Simple_repeat 2 21 0 270 0 0 0 chr2 119459484 119459514 -133797069 + (A)n Simple_repeat Simple_repeat 1 30 0 1361 293 99 37 chr2 119459719 119460664 -133795919 - L2 LINE L2 -13 3300 2299 207 318 19 93 chr2 119460664 119460771 -133795812 - L2 LINE L2 -1987 1327 1229 375 358 64 5 chr2 119461078 119461265 -133795318 - MIR SINE MIR -10 252 55 1822 165 0 0 chr2 119461523 119461826 -133794757 - AluSx SINE Alu -2 310 8 2542 67 0 9 chr2 119462075 119462404 -133794179 + L1PA5 LINE L1 5829 6154 0 492 160 113 9 chr2 119462411 119462517 -133794066 - FLAM_C SINE Alu -26 117 1 213 283 0 30 chr2 119462784 119462883 -133793700 + A-rich Low_complexity Low_complexity 3 98 0 214 241 37 0 chr2 119462978 119463032 -133793551 + (TATG)n Simple_repeat Simple_repeat 2 57 0 1360 107 0 0 chr2 119464052 119464230 -133792353 + AluSg/x SINE Alu 131 308 -4 253 363 96 14 chr2 119464259 119464405 -133792178 + MIR3 SINE MIR 44 201 -7 1245 172 88 12 chr2 119464876 119465126 -133791457 - AluJo SINE Alu -9 303 35 30 59 0 0 chr2 119465255 119465306 -133791277 + AT_rich Low_complexity Low_complexity 1 51 0 230 301 203 0 chr2 119465385 119465508 -133791075 + MIR SINE MIR 98 245 -17 9825 215 33 62 chr2 119466197 119468923 -133787660 - BaEV-int LTR ERV1 -71 6578 3932 302 162 15 44 chr2 119469111 119469179 -133787404 + Tigger5 DNA MER2_type 20 85 -2238 331 244 0 13 chr2 119469225 119469303 -133787280 + Tigger5 DNA MER2_type 2244 2320 -3 228 204 0 37 chr2 119469304 119469358 -133787225 + (CATA)n Simple_repeat Simple_repeat 3 54 0 264 286 48 0 chr2 119469386 119469470 -133787113 - MIR SINE MIR -108 154 67 700 286 5 0 chr2 119469633 119469818 -133786765 - MIR SINE MIR -76 186 1 184 206 0 0 chr2 119469828 119469862 -133786721 - L2 LINE L2 -20 3252 3219 2107 84 0 0 chr2 119470063 119470337 -133786246 + AluY SINE Alu 35 308 -3 459 302 0 88 chr2 119471239 119471421 -133785162 + MIR SINE MIR 21 186 -76 277 229 33 0 chr2 119475565 119475626 -133780957 - L1ME LINE L1 -5622 448 386 2005 34 0 0 chr2 119475676 119475912 -133780671 + L1PA3 LINE L1 5917 6152 -3 3680 184 8 1 chr2 119476019 119476726 -133779857 - L1MC2 LINE L1 -242 6102 5391 405 269 192 34 chr2 119476775 119476983 -133779600 - MIR SINE MIR -10 252 12 23 0 0 0 chr2 119477253 119477276 -133779307 + AT_rich Low_complexity Low_complexity 1 23 0 1662 183 32 48 chr2 119477451 119477822 -133778761 + MLT1A1 LTR MaLR 1 365 0 200 105 18 53 chr2 119477960 119478017 -133778566 + (TA)n Simple_repeat Simple_repeat 2 56 0 423 288 131 20 chr2 119478197 119478395 -133778188 + MIR SINE MIR 43 262 0 1160 133 25 5 chr2 119479023 119479226 -133777357 + THE1C LTR MaLR 169 375 0 3625 191 47 3 chr2 119479226 119479957 -133776626 + MSTB-int LTR MaLR 869 1631 -20 1960 172 130 3 chr2 119479974 119480352 -133776231 + MSTB LTR MaLR 1 426 0 204 333 44 56 chr2 119481493 119481583 -133775000 + L2 LINE L2 3183 3271 -42 245 238 124 57 chr2 119485998 119486103 -133770480 - MIR SINE MIR -77 185 74 2248 92 0 0 chr2 119486586 119486892 -133769691 - AluSg SINE Alu 0 306 1 606 215 8 0 chr2 119487132 119487253 -133769330 - Tigger1 DNA MER2_type -2 2416 2295 704 89 0 167 chr2 119487253 119487421 -133769162 + L1P LINE L1 5158 5297 -849 1384 82 58 5 chr2 119487522 119487728 -133768855 - MER4E LTR ERV1 -562 217 1 213 154 0 0 chr2 119488246 119488285 -133768298 + (CA)n Simple_repeat Simple_repeat 2 40 0 230 376 99 0 chr2 119489343 119489444 -133767139 - L2 LINE L2 -40 3232 3122 461 205 1 4 chr2 119489616 119489718 -133766865 + MER67A LTR ERV1 453 543 0 208 436 8 0 chr2 119489927 119490044 -133766539 - L2 LINE L2 -624 2690 2573 252 365 76 38 chr2 119490164 119490666 -133765917 - L2 LINE L2 -930 2384 1864 509 329 108 19 chr2 119490686 119491112 -133765471 - MLT1H LTR MaLR -15 534 71 195 314 113 57 chr2 119491250 119491374 -133765209 - L2 LINE L2 -2835 479 349 392 289 63 54 chr2 119492140 119492886 -133763697 + L1MEd LINE L1 923 1729 -4581 2054 141 0 0 chr2 119493270 119493561 -133763022 + AluSq SINE Alu 1 291 -22 2287 64 47 0 chr2 119494193 119494489 -133762094 - AluY SINE Alu -1 310 1 188 262 24 0 chr2 119495948 119495990 -133760593 + MIR SINE MIR 81 123 -85 30 69 0 0 chr2 119496241 119496299 -133760284 + AT_rich Low_complexity Low_complexity 1 58 0 415 275 87 47 chr2 119496557 119496965 -133759618 + L1ME3A LINE L1 5466 5890 -280 24 32 0 0 chr2 119497378 119497409 -133759174 + AT_rich Low_complexity Low_complexity 1 31 0 487 286 86 82 chr2 119498446 119498959 -133757624 + L2 LINE L2 2154 2668 -646 192 342 40 13 chr2 119499010 119499086 -133757497 + L2 LINE L2 3180 3257 -56 252 333 21 14 chr2 119499128 119499269 -133757314 - MARNA DNA Mariner -402 184 43 1464 198 35 14 chr2 119499290 119499573 -133757010 + AluJo SINE Alu 11 299 -13 403 276 98 44 chr2 119499745 119499970 -133756613 - MIR SINE MIR -6 256 20 233 371 11 0 chr2 119500253 119500342 -133756241 + MER5B DNA MER1_type 87 176 -2 239 261 31 0 chr2 119500488 119500505 -133756078 + AluJo SINE Alu 117 135 -167 2201 118 0 0 chr2 119500505 119500801 -133755782 + AluSx SINE Alu 1 296 -16 1407 199 205 10 chr2 119501858 119502244 -133754339 + LOR1b LTR ERV1 1 461 0 212 149 21 0 chr2 119503688 119503735 -133752848 + (TA)n Simple_repeat Simple_repeat 1 48 0 357 302 32 16 chr2 119503804 119503930 -133752653 - MIR SINE MIR -133 129 2 5590 156 35 12 chr2 119504085 119505603 -133750980 + L1M2 LINE L1 4186 5740 -551 1254 150 34 1 chr2 119505714 119506059 -133750524 + L1P4 LINE L1 5130 5483 -683 234 248 128 9 chr2 119506228 119506337 -133750246 + MIR SINE MIR 107 228 -34 235 208 0 0 chr2 119507155 119507203 -133749380 + (TG)n Simple_repeat Simple_repeat 1 48 0 185 0 40 0 chr2 119507861 119507886 -133748697 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 716 177 114 0 chr2 119508006 119508164 -133748419 - MER3 DNA MER1_type -80 129 1 553 268 0 0 chr2 119508603 119508730 -133747853 + FLAM_A SINE Alu 1 127 -6 898 166 0 0 chr2 119509340 119509507 -133747076 - AluSg/x SINE Alu 0 310 144 2075 120 3 0 chr2 119509678 119510021 -133746562 - AluSp SINE Alu 0 344 1 762 325 30 10 chr2 119514116 119514414 -133742169 + HERVI LTR ERV1 3592 3895 -3890 284 132 94 0 chr2 119514414 119514467 -133742116 + AluY SINE Alu 85 142 -159 180 111 0 0 chr2 119514742 119514769 -133741814 + (TTA)n Simple_repeat Simple_repeat 3 29 0 243 273 107 58 chr2 119514987 119515108 -133741475 - L2 LINE L2 -1 3271 3145 286 350 31 26 chr2 119515136 119515330 -133741253 - L2 LINE L2 -208 3105 2911 367 268 170 13 chr2 119515477 119515630 -133740953 - L2 LINE L2 -437 2877 2701 1948 73 0 0 chr2 119516410 119516644 -133739939 - AluSg SINE Alu -15 295 62 279 375 24 40 chr2 119516986 119517237 -133739346 - L2 LINE L2 -353 2961 2715 1516 197 24 7 chr2 119517238 119517528 -133739055 + AluJb SINE Alu 1 295 -17 208 343 40 10 chr2 119517592 119517691 -133738892 - MIR SINE MIR 0 262 161 3745 186 20 17 chr2 119517691 119518399 -133738184 + MER50 LTR ERV1 1 710 -24 2521 162 33 9 chr2 119518401 119518963 -133737620 + MER50-int LTR ERV1 1 713 -6492 922 165 90 52 chr2 119518963 119519175 -133737408 + MER50-int LTR ERV1 1302 1521 -5684 1313 194 23 99 chr2 119519252 119519597 -133736986 + MER50-int LTR ERV1 1532 1850 -5355 2691 169 10 12 chr2 119519628 119520108 -133736475 + MER50-int LTR ERV1 1003 1481 -3399 3263 157 74 19 chr2 119520110 119520976 -133735607 + MER50-int LTR ERV1 3383 4106 -804 762 203 14 0 chr2 119521016 119521164 -133735419 + MER50-int LTR ERV1 6201 6350 -855 4414 176 55 2 chr2 119521284 119522106 -133734477 + MER50-int LTR ERV1 6333 7197 -8 3815 157 38 39 chr2 119522106 119522702 -133733881 + MER50 LTR ERV1 1 597 -137 1936 154 30 7 chr2 119522702 119522824 -133733759 + AluSx SINE Alu 1 119 -193 405 0 0 0 chr2 119522824 119522869 -133733714 + (CA)n Simple_repeat Simple_repeat 2 46 0 1936 154 30 7 chr2 119522869 119523051 -133733532 + AluSx SINE Alu 119 312 0 3815 157 38 39 chr2 119523051 119523166 -133733417 + MER50 LTR ERV1 597 711 -23 513 376 8 16 chr2 119523321 119523576 -133733007 - L2 LINE L2 -698 2616 2364 811 230 0 0 chr2 119523997 119524158 -133732425 - FRAM SINE Alu -18 158 1 308 306 0 0 chr2 119524802 119524887 -133731696 + MIR3 SINE MIR 109 193 -15 261 343 20 0 chr2 119524992 119525091 -133731492 + MIR SINE MIR 51 151 -111 213 141 42 0 chr2 119526032 119526103 -133730480 + (TA)n Simple_repeat Simple_repeat 2 75 0 37 39 0 0 chr2 119526103 119526154 -133730429 + AT_rich Low_complexity Low_complexity 1 51 0 451 264 221 0 chr2 119526358 119526498 -133730085 + MER5A DNA MER1_type 7 177 -12 235 247 60 93 chr2 119526498 119526680 -133729903 + MER3 DNA MER1_type 32 207 -2 * 910 209 10 30 chr2 119526680 119526729 -133729854 - MER3 DNA MER1_type -164 45 1 915 219 90 68 chr2 119527668 119528124 -133728459 + LTR37B LTR ERV1 1 466 -2 290 258 108 21 chr2 119529690 119529783 -133726800 - MIR SINE MIR -71 191 91 1333 56 0 0 chr2 119529990 119530150 -133726433 - AluY SINE Alu -15 296 137 340 308 28 9 chr2 119530767 119530874 -133725709 + MIR SINE MIR 42 150 -58 2162 132 7 0 chr2 119531000 119531310 -133725273 - AluSx SINE Alu 0 312 1 483 336 113 13 chr2 119583536 119583765 -133672818 + MIR SINE MIR 11 262 0 198 0 0 0 chr2 119585231 119585253 -133671330 + (T)n Simple_repeat Simple_repeat 1 22 0 569 275 43 33 chr2 119587661 119587872 -133668711 + MIR SINE MIR 17 229 -33 1663 167 43 10 chr2 119588294 119588593 -133667990 - AluJo SINE Alu -3 309 1 21 36 0 0 chr2 119588687 119588715 -133667868 + AT_rich Low_complexity Low_complexity 1 28 0 187 273 36 18 chr2 119588995 119589050 -133667533 - MIR3 SINE MIR -27 181 126 2215 92 0 3 chr2 119589479 119589772 -133666811 + AluSc SINE Alu 1 292 -17 366 80 0 0 chr2 119591787 119591837 -133664746 + (CA)n Simple_repeat Simple_repeat 1 50 0 358 266 90 28 chr2 119592629 119592806 -133663777 - MIR SINE MIR -10 252 65 1317 180 75 19 chr2 119593367 119593634 -133662949 + AluJb SINE Alu 5 286 -26 5429 241 63 19 chr2 119593638 119596188 -133660395 - L1MB5 LINE L1 -100 6572 3883 1223 208 25 113 chr2 119596188 119596588 -133659995 - MLT1A1 LTR MaLR 0 365 1 3093 258 46 29 chr2 119596588 119597555 -133659028 - L1MB5 LINE L1 -3664 2980 2031 2049 127 0 3 chr2 119597555 119597855 -133658728 + AluSq SINE Alu 1 299 -14 3093 258 46 29 chr2 119597855 119598860 -133657723 - L1MB5 LINE L1 -4613 2031 858 299 164 0 0 chr2 119599020 119599075 -133657508 - L1MB5 LINE L1 -5773 769 715 13451 159 27 7 chr2 119599213 119600606 -133655977 - Tigger1 DNA MER2_type 0 2418 956 1508 128 0 5 chr2 119600606 119600825 -133655758 + AluSc SINE Alu 74 291 -18 13451 159 27 7 chr2 119600825 119601801 -133654782 - Tigger1 DNA MER2_type -1462 956 1 4166 247 54 25 chr2 119602071 119602714 -133653869 - Charlie1a DNA MER1_type -1345 1416 793 5848 167 58 7 chr2 119602714 119603885 -133652698 + Tigger3b DNA MER2_type 1 1231 0 4166 247 54 25 chr2 119603885 119604563 -133652020 - Charlie1a DNA MER1_type -1968 793 57 202 375 10 0 chr2 119604919 119605023 -133651560 + L3b LINE CR1 1161 1265 -318 312 387 8 8 chr2 119605341 119605465 -133651118 - MIR3 SINE MIR -48 160 37 22 35 0 0 chr2 119605788 119605817 -133650766 + AT_rich Low_complexity Low_complexity 1 29 0 5243 52 1 1 chr2 119605975 119606630 -133649953 - L1PA5 LINE L1 0 6154 5500 27439 47 4 0 chr2 119606732 119610195 -133646388 - L1PA5 LINE L1 -1018 5128 1652 1920 80 0 4 chr2 119610192 119610454 -133646129 + L1PA5 LINE L1 1414 1674 -4472 * 2046 165 8 22 chr2 119611212 119611581 -133645002 - THE1B LTR MaLR 0 364 1 23 33 0 0 chr2 119611591 119611621 -133644962 + AT_rich Low_complexity Low_complexity 1 30 0 345 24 0 0 chr2 119612831 119612873 -133643710 + (TC)n Simple_repeat Simple_repeat 2 43 0 24 0 0 0 chr2 119613044 119613068 -133643515 + AT_rich Low_complexity Low_complexity 1 24 0 379 236 222 21 chr2 119613706 119613850 -133642733 + MIR SINE MIR 1 173 -89 234 0 0 0 chr2 119613934 119613960 -133642623 + (A)n Simple_repeat Simple_repeat 1 26 0 212 175 35 18 chr2 119614094 119614151 -133642432 + GA-rich Low_complexity Low_complexity 2 59 0 27 0 0 0 chr2 119614308 119614335 -133642248 + AT_rich Low_complexity Low_complexity 1 27 0 762 195 0 69 chr2 119614724 119614898 -133641685 - FRAM SINE Alu -15 161 1 4181 223 46 43 chr2 119614905 119616380 -133640203 + L1MD2 LINE L1 4855 6332 -27 26 50 0 0 chr2 119616856 119616896 -133639687 + AT_rich Low_complexity Low_complexity 1 40 0 29 60 0 0 chr2 119617014 119617064 -133639519 + AT_rich Low_complexity Low_complexity 1 50 0 4123 145 32 33 chr2 119617539 119618351 -133638232 - L1MC1 LINE L1 0 6333 5523 1591 156 0 49 chr2 119618479 119618786 -133637797 - AluSx SINE Alu -20 292 1 22 0 0 0 chr2 119620229 119620251 -133636332 + AT_rich Low_complexity Low_complexity 1 22 0 1169 124 0 0 chr2 119620261 119620430 -133636153 + AluSg/x SINE Alu 136 304 -8 21 0 0 0 chr2 119622217 119622238 -133634345 + AT_rich Low_complexity Low_complexity 1 21 0 3660 163 21 42 chr2 119623267 119623754 -133632829 - MER39 LTR ERV1 -5 702 233 3743 79 0 0 chr2 119623754 119624247 -133632336 - L1PA7 LINE L1 0 6154 5662 3660 163 21 42 chr2 119624247 119624476 -133632107 - MER39 LTR ERV1 -474 233 1 382 80 0 67 chr2 119624757 119624832 -133631751 - L1PA16 LINE L1 0 6166 6097 250 330 61 0 chr2 119625149 119625264 -133631319 - MER5C DNA MER1_type -200 124 3 200 308 83 17 chr2 119625583 119625703 -133630880 + MIR SINE MIR 79 206 -56 389 372 29 0 chr2 119626327 119626534 -133630049 + L1MC4a LINE L1 5701 5913 -1895 269 268 92 7 chr2 119626543 119626685 -133629898 + L1ME4a LINE L1 5933 6086 -35 252 192 19 0 chr2 119627055 119627107 -133629476 + L1PA15 LINE L1 6080 6132 -33 3761 169 10 3 chr2 119627126 119627805 -133628778 + L1PA16 LINE L1 5474 6157 -9 21 71 0 0 chr2 119628502 119628544 -133628039 + AT_rich Low_complexity Low_complexity 1 42 0 189 240 20 0 chr2 119628578 119628628 -133627955 - L2 LINE L2 -5 3267 3217 204 163 0 0 chr2 119628794 119628837 -133627746 + (TCTA)n Simple_repeat Simple_repeat 3 45 0 181 289 115 0 chr2 119628865 119628917 -133627666 - L2 LINE L2 -41 3231 3174 182 316 9 61 chr2 119629914 119630028 -133626555 - MIR SINE MIR -42 220 113 21 0 0 0 chr2 119630174 119630195 -133626388 + AT_rich Low_complexity Low_complexity 1 21 0 3214 135 30 78 chr2 119630424 119630723 -133625860 - L1PA16 LINE L1 -1 6165 5867 1612 182 23 71 chr2 119630723 119630855 -133625728 - L1MA4A LINE L1 -402 5901 5764 9066 122 6 0 chr2 119630855 119633076 -133623507 - L1PA8A LINE L1 0 6131 3951 1612 182 23 71 chr2 119633076 119633378 -133623205 - L1MA4A LINE L1 -539 5764 5488 765 204 17 0 chr2 119633312 119633484 -133623099 - L1PA16 LINE L1 -131 6035 5488 * 8514 134 48 38 chr2 119633525 119634985 -133621598 - THE1C-int LTR MaLR -106 1474 1 2408 124 11 8 chr2 119634985 119635341 -133621242 - THE1C LTR MaLR 0 375 19 4699 252 51 16 chr2 119635346 119636888 -133619695 - L1PA12 LINE L1 -3891 2906 1394 307 373 6 19 chr2 119637551 119637712 -133618871 - L1PA12 LINE L1 -5266 1521 1363 * 905 327 36 34 chr2 119637710 119638233 -133618350 - L1PA12 LINE L1 -6177 610 1 301 171 23 0 chr2 119638291 119638379 -133618204 + (TG)n Simple_repeat Simple_repeat 1 90 0 199 302 32 16 chr2 119638688 119638751 -133617832 - MIR SINE MIR -63 145 82 365 340 27 20 chr2 119638870 119639017 -133617566 + L3 LINE CR1 1430 1577 0 208 283 13 118 chr2 119639877 119640029 -133616554 + MIR SINE MIR 92 227 -35 208 294 0 0 chr2 119640071 119640122 -133616461 + MIR SINE MIR 82 132 -76 356 288 69 23 chr2 119640131 119640334 -133616249 - MIR SINE MIR 0 262 46 216 323 77 0 chr2 119641031 119641096 -133615487 + L2 LINE L2 3210 3279 -34 28 29 0 0 chr2 119642436 119642471 -133614112 + AT_rich Low_complexity Low_complexity 1 35 0 260 35 0 69 chr2 119645083 119645141 -133611442 + (TTTAA)n Simple_repeat Simple_repeat 4 57 0 718 283 40 0 chr2 119647042 119647215 -133609368 - MER5A DNA MER1_type -9 180 1 199 311 27 0 chr2 119648089 119648163 -133608420 + L3 LINE CR1 1321 1396 -181 288 307 53 9 chr2 119649357 119649471 -133607112 - L2 LINE L2 -160 3112 2994 1595 195 144 3 chr2 119650017 119650204 -133606379 - MSTA LTR MaLR 0 428 269 180 0 0 0 chr2 119650204 119650224 -133606359 + (GA)n Simple_repeat Simple_repeat 2 21 0 1595 195 144 3 chr2 119650224 119650410 -133606173 - MSTA LTR MaLR -159 269 2 7722 152 83 35 chr2 119650411 119651916 -133604667 - MSTA-int LTR MaLR 0 1580 3 1482 172 183 14 chr2 119651918 119652284 -133604299 - MSTA LTR MaLR 0 428 1 41802 40 21 2 chr2 119652864 119658886 -133597697 - L1PA3 LINE L1 0 6155 13 2078 134 73 15 chr2 119659464 119659806 -133596777 + THE1B LTR MaLR 1 362 -2 28 91 0 0 chr2 119659989 119660066 -133596517 + AT_rich Low_complexity Low_complexity 1 77 0 2706 179 109 66 chr2 119660334 119660541 -133596042 + MER39 LTR ERV1 1 198 -509 789 219 7 7 chr2 119660541 119660692 -133595891 + FRAM SINE Alu 2 152 -14 2706 179 109 66 chr2 119660692 119660707 -133595876 + MER39 LTR ERV1 198 211 -496 1142 57 8 41 chr2 119660707 119661076 -133595507 + (GAA)n Simple_repeat Simple_repeat 1 357 0 2706 179 109 66 chr2 119661076 119661125 -133595458 + MER39 LTR ERV1 211 256 -451 2147 139 11 6 chr2 119661125 119661478 -133595105 + THE1A LTR MaLR 1 355 0 2706 179 109 66 chr2 119661478 119661652 -133594931 + MER39 LTR ERV1 256 421 -286 2200 120 0 13 chr2 119661652 119661969 -133594614 - AluSq SINE Alu 0 313 1 2706 179 109 66 chr2 119661969 119662197 -133594386 + MER39 LTR ERV1 421 707 0 21 0 0 0 chr2 119662328 119662349 -133594234 + AT_rich Low_complexity Low_complexity 1 21 0 1552 213 60 67 chr2 119662568 119663132 -133593451 - MER34B LTR ERV1 0 585 10 290 264 38 0 chr2 119663912 119664018 -133592565 - MER53 DNA DNA -73 116 7 293 270 195 38 chr2 119664138 119664297 -133592286 - L2 LINE L2 -106 3207 3024 517 301 107 29 chr2 119664535 119664844 -133591739 - L2 LINE L2 -444 2870 2538 204 241 35 46 chr2 119664941 119665028 -133591555 + L2 LINE L2 3134 3219 -94 309 26 0 0 chr2 119665575 119665613 -133590970 + (CA)n Simple_repeat Simple_repeat 2 39 0 32 0 0 0 chr2 119667989 119668021 -133588562 + AT_rich Low_complexity Low_complexity 1 32 0 222 311 176 0 chr2 119668288 119668407 -133588176 + MIR3 SINE MIR 42 181 -27 21 36 0 0 chr2 119669303 119669331 -133587252 + AT_rich Low_complexity Low_complexity 1 28 0 2015 139 7 0 chr2 119669344 119669639 -133586944 + AluSx SINE Alu 1 297 -15 189 344 60 73 chr2 119670074 119670225 -133586358 - L2 LINE L2 -204 3068 2920 210 71 0 0 chr2 119670783 119670811 -133585772 + (A)n Simple_repeat Simple_repeat 1 28 0 1522 208 20 52 chr2 119671373 119671773 -133584810 - MLT1B LTR MaLR -3 387 1 2225 156 46 17 chr2 119676148 119676564 -133580019 - MSTA LTR MaLR 0 428 1 370 222 14 0 chr2 119676881 119676953 -133579630 - Tigger5 DNA MER2_type 0 2323 2251 1226 227 18 28 chr2 119677624 119677906 -133578677 + AluJo SINE Alu 14 292 -20 659 268 0 15 chr2 119678057 119678262 -133578321 + L1M3b LINE L1 1332 1533 -5326 * 946 287 57 37 chr2 119678260 119678664 -133577919 + L1 LINE L1 1 412 -5869 3891 199 29 120 chr2 119678685 119679700 -133576883 + L1 LINE L1 3423 4529 -1821 2069 140 3 13 chr2 119679700 119680015 -133576568 - AluSx SINE Alu 0 312 1 3891 199 29 120 chr2 119680015 119680360 -133576223 + L1 LINE L1 4529 4640 -1710 2381 153 57 0 chr2 119680360 119680764 -133575819 - MSTA LTR MaLR -1 427 1 3891 199 29 120 chr2 119680764 119680884 -133575699 + L1 LINE L1 4640 4769 -1581 1137 228 139 43 chr2 119680884 119681301 -133575282 - MSTB2 LTR MaLR 0 457 1 4616 243 129 25 chr2 119681301 119682708 -133573875 - MSTB2-int LTR MaLR 0 1651 99 226 128 21 0 chr2 119682771 119682818 -133573765 + L1MA7 LINE L1 6159 6206 -85 * 1055 241 38 26 chr2 119682815 119683234 -133573349 + L1M3b LINE L1 3012 3435 -3522 2291 155 15 23 chr2 119683244 119683643 -133572940 - MER61B LTR ERV1 -29 396 1 5332 134 48 12 chr2 119683643 119684525 -133572058 - MER61B-int LTR ERV1 -1 5216 4304 1393 156 0 4 chr2 119684546 119684771 -133571812 - MER61B LTR ERV1 -201 224 1 1537 275 45 33 chr2 119684771 119685625 -133570958 + L1M3b LINE L1 3432 4295 -2662 3818 134 11 3 chr2 119685694 119686312 -133570271 + L1PB2 LINE L1 5360 5982 -169 926 119 0 0 chr2 119686304 119686438 -133570145 - L1P LINE L1 -1119 5027 4894 * 3316 105 42 0 chr2 119686438 119686931 -133569652 + L1PA10 LINE L1 5638 6152 -16 1161 105 37 5 chr2 119686941 119687131 -133569452 + L1PB2 LINE L1 5951 6146 -5 2257 109 0 13 chr2 119687359 119687671 -133568912 + AluSg SINE Alu 1 308 -2 1167 214 74 63 chr2 119687766 119688197 -133568386 - MER110A LTR ERV1 -32 436 1 206 306 0 42 chr2 119688315 119688387 -133568196 - L2 LINE L2 0 3272 3204 344 366 20 20 chr2 119690500 119690653 -133565930 - MIR3 SINE MIR -25 183 31 223 299 113 0 chr2 119690684 119690781 -133565802 + L2 LINE L2 3202 3309 -4 369 0 0 0 chr2 119692147 119692188 -133564395 + (TA)n Simple_repeat Simple_repeat 2 42 0 197 368 26 17 chr2 119693004 119693121 -133563462 - L2 LINE L2 -19 3253 3136 575 282 61 42 chr2 119693780 119694040 -133562543 - MIR SINE MIR -1 261 3 674 259 17 65 chr2 119694383 119694615 -133561968 - L2 LINE L2 -743 2571 2351 308 169 0 34 chr2 119694624 119694683 -133561900 - MLT2D LTR ERVL 0 414 358 223 192 19 0 chr2 119694686 119694738 -133561845 + GA-rich Low_complexity Low_complexity 2 54 0 1628 165 28 35 chr2 119694798 119695083 -133561500 + AluJo SINE Alu 1 283 -29 41 58 0 0 chr2 119695092 119695161 -133561422 + AT_rich Low_complexity Low_complexity 1 69 0 1522 199 44 0 chr2 119695161 119695457 -133561126 - MLT2D LTR ERVL -105 309 1 469 308 0 8 chr2 119695458 119695591 -133560992 - L2 LINE L2 -969 2345 2214 1651 159 80 38 chr2 119695602 119695941 -133560642 - MSTB LTR MaLR -73 353 1 21 0 0 0 chr2 119696105 119696126 -133560457 + AT_rich Low_complexity Low_complexity 1 21 0 815 231 91 0 chr2 119697476 119697684 -133558899 - Zaphod DNA AcHobo -3345 686 460 2326 105 0 0 chr2 119697900 119698205 -133558378 + AluSc SINE Alu 1 305 -4 308 174 65 65 chr2 119699289 119699427 -133557156 - MER33 DNA MER1_type -3 321 184 465 232 134 10 chr2 119699434 119699628 -133556955 - MER33 DNA MER1_type -82 242 25 23 54 0 0 chr2 119700696 119700733 -133555850 + AT_rich Low_complexity Low_complexity 1 37 0 24 67 0 0 chr2 119700939 119700984 -133555599 + AT_rich Low_complexity Low_complexity 1 45 0 1949 196 64 0 chr2 119702006 119702379 -133554204 - MSTB LTR MaLR 0 426 30 335 140 0 0 chr2 119702379 119702429 -133554154 - MSTB LTR MaLR -347 79 30 335 140 0 0 chr2 119702428 119702478 -133554105 - MSTB LTR MaLR -346 80 31 345 137 0 0 chr2 119702478 119702529 -133554054 - MSTB LTR MaLR -346 80 30 324 143 0 0 chr2 119702529 119702578 -133554005 - MSTB LTR MaLR -347 79 31 345 137 0 0 chr2 119702578 119702629 -133553954 - MSTB LTR MaLR -346 80 30 312 146 0 0 chr2 119702629 119702677 -133553906 - MSTB LTR MaLR -347 79 32 305 140 20 0 chr2 119702677 119702727 -133553856 - MSTB LTR MaLR -345 81 31 345 137 0 0 chr2 119702727 119702778 -133553805 - MSTB LTR MaLR -346 80 30 324 143 0 0 chr2 119702778 119702827 -133553756 - MSTB LTR MaLR -347 79 31 345 137 0 0 chr2 119702827 119702878 -133553705 - MSTB LTR MaLR -346 80 30 315 163 0 0 chr2 119702878 119702927 -133553656 - MSTB LTR MaLR -347 79 31 355 135 0 0 chr2 119702927 119702979 -133553604 - MSTB LTR MaLR -346 80 29 450 118 26 13 chr2 119702980 119703056 -133553527 - MSTB LTR MaLR -349 77 1 8411 173 50 11 chr2 119703056 119704644 -133551939 - MSTA-int LTR MaLR 0 1651 1 1539 176 127 12 chr2 119704644 119704983 -133551600 - MSTA LTR MaLR 0 428 51 1604 113 5 0 chr2 119704983 119705204 -133551379 - LTR10C LTR ERV1 0 591 370 411 19 0 38 chr2 119705203 119705256 -133551327 - LTR10C LTR ERV1 -540 51 1 * 260 244 0 33 chr2 119705321 119705411 -133551172 + A-rich Low_complexity Low_complexity 4 90 0 21 0 0 0 chr2 119705435 119705456 -133551127 + AT_rich Low_complexity Low_complexity 1 21 0 31 0 0 0 chr2 119705525 119705556 -133551027 + AT_rich Low_complexity Low_complexity 1 31 0 238 358 121 33 chr2 119706169 119706476 -133550107 + L3 LINE CR1 1061 1394 -183 286 280 53 67 chr2 119708712 119708862 -133547721 + MIR3 SINE MIR 52 199 -9 369 0 0 0 chr2 119708967 119709008 -133547575 + (TG)n Simple_repeat Simple_repeat 2 42 0 808 233 68 5 chr2 119709017 119709223 -133547360 + MER20 DNA MER1_type 1 219 0 263 316 0 0 chr2 119709711 119709787 -133546796 + (TATATG)n Simple_repeat Simple_repeat 3 78 0 181 391 73 0 chr2 119710641 119710751 -133545832 - L2 LINE L2 -5 3267 3150 21 0 0 0 chr2 119710830 119710851 -133545732 + AT_rich Low_complexity Low_complexity 1 21 0 5096 153 33 38 chr2 119710853 119712287 -133544296 - L1MA4 LINE L1 -4 6296 4866 183 368 18 0 chr2 119713390 119713447 -133543136 - L3 LINE CR1 -4 1573 1516 2531 177 51 62 chr2 119714424 119715033 -133541550 + L1MB4 LINE L1 5376 5977 -203 937 239 9 0 chr2 119715579 119715809 -133540774 + L1MB4 LINE L1 5948 6179 -1 216 67 0 0 chr2 119716453 119716483 -133540100 + (TG)n Simple_repeat Simple_repeat 1 30 0 2075 183 39 90 chr2 119716792 119717441 -133539142 - LTR6A LTR ERV1 0 564 1 340 138 17 35 chr2 119717902 119717960 -133538623 + MER33 DNA MER1_type 7 63 -261 2192 117 7 0 chr2 119718112 119718419 -133538164 - AluSc SINE Alu 0 309 1 351 44 0 0 chr2 119718657 119718702 -133537881 + (TG)n Simple_repeat Simple_repeat 2 46 0 816 239 33 0 chr2 119719931 119720111 -133536472 + MER5A DNA MER1_type 4 189 0 1078 174 42 0 chr2 119720119 119720309 -133536274 - MER20 DNA MER1_type 0 219 22 1882 148 61 17 chr2 119721213 119721572 -133535011 + THE1C LTR MaLR 1 375 0 8872 125 39 82 chr2 119721574 119722730 -133533853 + THE1C-int LTR MaLR 3 1068 -512 3210 145 39 2 chr2 119722730 119723289 -133533294 - LTR19B LTR ERV1 0 580 1 8872 125 39 82 chr2 119723289 119723781 -133532802 + THE1C-int LTR MaLR 1068 1580 0 1805 167 49 25 chr2 119723781 119724147 -133532436 + THE1C LTR MaLR 1 375 0 21 82 0 0 chr2 119724948 119724997 -133531586 + AT_rich Low_complexity Low_complexity 1 49 0 555 265 239 8 chr2 119725065 119725325 -133531258 + L2 LINE L2 2994 3313 0 181 379 30 61 chr2 119726224 119726356 -133530227 - MIR SINE MIR -60 148 21 1438 199 81 26 chr2 119726360 119726707 -133529876 - MER47A DNA MER2_type 0 366 1 285 312 88 8 chr2 119727275 119727400 -133529183 - MIR SINE MIR -105 157 23 23 54 0 0 chr2 119728040 119728077 -133528506 + AT_rich Low_complexity Low_complexity 1 37 0 192 135 0 0 chr2 119728176 119728213 -133528370 + (TG)n Simple_repeat Simple_repeat 2 38 0 394 349 74 0 chr2 119728247 119728422 -133528161 - MIR3 SINE MIR -15 193 6 2947 280 88 48 chr2 119729743 119731665 -133524918 + L1ME1 LINE L1 2782 4879 -1299 6615 72 9 10 chr2 119731665 119733273 -133523310 + L1PA7 LINE L1 4548 6154 0 2947 280 88 48 chr2 119733273 119734424 -133522159 + L1ME1 LINE L1 4879 5983 -195 2097 125 0 0 chr2 119735453 119735749 -133520834 - AluSx SINE Alu -16 296 1 234 0 0 0 chr2 119736218 119736244 -133520339 + (TA)n Simple_repeat Simple_repeat 1 26 0 414 245 14 29 chr2 119737551 119737690 -133518893 + L1ME1 LINE L1 6021 6157 -9 1443 151 34 24 chr2 119737698 119737990 -133518593 + L1MA9 LINE L1 6009 6303 -9 333 397 38 3 chr2 119738374 119738664 -133517919 + L2 LINE L2 2319 2618 -696 1721 179 13 7 chr2 119739030 119739338 -133517245 - AluSx SINE Alu -2 310 1 24 0 0 0 chr2 119739338 119739362 -133517221 + AT_rich Low_complexity Low_complexity 1 24 0 1240 321 110 31 chr2 119740509 119740715 -133515868 - MER115 DNA AcHobo 0 693 505 194 23 68 23 chr2 119740715 119740759 -133515824 + A-rich Low_complexity Low_complexity 2 47 0 1240 321 110 31 chr2 119740759 119741159 -133515424 - MER115 DNA AcHobo -188 505 39 23 54 0 0 chr2 119741607 119741644 -133514939 + AT_rich Low_complexity Low_complexity 1 37 0 2172 128 3 0 chr2 119741850 119742156 -133514427 + AluSx SINE Alu 1 307 -5 312 345 47 0 chr2 119743068 119743216 -133513367 + MIR SINE MIR 63 217 -45 205 293 35 0 chr2 119743490 119743548 -133513035 + (CATG)n Simple_repeat Simple_repeat 4 63 0 2142 102 0 72 chr2 119743590 119743924 -133512659 + AluSg SINE Alu 1 310 0 497 111 16 7 chr2 119745268 119745458 -133511125 - AluSg/x SINE Alu -10 299 77 2101 102 51 0 chr2 119745926 119746220 -133510363 + AluSp SINE Alu 1 309 -4 1656 177 3 34 chr2 119747882 119748086 -133508497 - AluJb SINE Alu 0 312 120 234 0 0 0 chr2 119748086 119748112 -133508471 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1656 177 3 34 chr2 119748112 119748229 -133508354 - AluJb SINE Alu -192 120 1 22 0 0 0 chr2 119748351 119748373 -133508210 + AT_rich Low_complexity Low_complexity 1 22 0 414 273 33 47 chr2 119748457 119748607 -133507976 - MIR SINE MIR -51 211 64 736 186 165 32 chr2 119748628 119748913 -133507670 - MER33 DNA MER1_type 0 324 2 196 314 105 65 chr2 119748965 119749089 -133507494 + L2 LINE L2 3136 3264 -8 2861 186 35 13 chr2 119750770 119751307 -133505276 + MSTA-int LTR MaLR 255 803 -848 6205 193 38 2 chr2 119751308 119752422 -133504161 + MSTA-int LTR MaLR 498 1651 0 1980 186 97 5 chr2 119752422 119752814 -133503769 + MSTA LTR MaLR 1 428 0 1117 245 33 0 chr2 119752814 119753059 -133503524 - MSTA LTR MaLR -175 253 1 4831 234 23 17 chr2 119753066 119754099 -133502484 + L1MB3 LINE L1 3726 4751 -1432 2175 139 82 30 chr2 119754099 119754503 -133502080 - MSTB LTR MaLR 0 426 2 4831 234 23 17 chr2 119754503 119755909 -133500674 + L1MB3 LINE L1 4751 6182 -1 21 0 0 0 chr2 119755951 119755972 -133500611 + AT_rich Low_complexity Low_complexity 1 21 0 300 359 111 5 chr2 119756447 119756645 -133499938 + MIR SINE MIR 32 250 -12 260 233 0 55 chr2 119757856 119757929 -133498654 + MIR3 SINE MIR 125 193 -15 492 224 16 0 chr2 119757996 119758130 -133498453 - L1MB8 LINE L1 -269 5911 5777 22 35 0 0 chr2 119758476 119758505 -133498078 + AT_rich Low_complexity Low_complexity 1 29 0 27 0 0 0 chr2 119758526 119758553 -133498030 + AT_rich Low_complexity Low_complexity 1 27 0 1491 213 54 35 chr2 119758605 119759110 -133497473 - L1MB7 LINE L1 -39 6145 5732 280 326 42 43 chr2 119759492 119759725 -133496858 - MIR SINE MIR -14 248 17 453 36 0 0 chr2 119759733 119759788 -133496795 + (TCTA)n Simple_repeat Simple_repeat 2 56 0 216 167 0 0 chr2 119759788 119759824 -133496759 + (TG)n Simple_repeat Simple_repeat 2 37 0 399 336 79 31 chr2 119760726 119761044 -133495539 + MLT1K LTR MaLR 141 473 -115 1094 115 0 0 chr2 119761241 119761389 -133495194 + AluSc SINE Alu 145 292 -17 186 71 0 0 chr2 119761545 119761573 -133495010 + (A)n Simple_repeat Simple_repeat 1 28 0 21 0 0 75 chr2 119762415 119762455 -133494128 + AT_rich Low_complexity Low_complexity 1 37 0 8737 20 0 0 chr2 119763386 119765199 -133491384 + L1HS LINE L1 4342 6155 0 884 203 117 15 chr2 119765407 119765604 -133490979 - MER58A DNA MER1_type -7 217 1 3554 175 24 122 chr2 119765615 119766439 -133490144 + MER4D LTR ERV1 1 711 -192 2149 111 61 19 chr2 119766439 119766799 -133489784 - THE1C LTR MaLR 0 375 1 3554 175 24 122 chr2 119766799 119766975 -133489608 + MER4D LTR ERV1 711 903 0 23 78 0 0 chr2 119766983 119767034 -133489549 + AT_rich Low_complexity Low_complexity 1 51 0 1195 211 97 92 chr2 119767084 119767142 -133489441 - MER31B LTR ERV1 -9 457 401 1816 162 3 23 chr2 119767142 119767450 -133489133 + AluSx SINE Alu 1 302 -10 1195 211 97 92 chr2 119767450 119767634 -133488949 - MER31B LTR ERV1 -65 401 219 2042 154 47 59 chr2 119767634 119768126 -133488457 - LTR19A LTR ERV1 0 486 1 1195 211 97 92 chr2 119768126 119768337 -133488246 - MER31B LTR ERV1 -247 219 1 691 209 74 115 chr2 119768549 119769036 -133487547 - MER110A LTR ERV1 -1 467 1 38 22 0 0 chr2 119769373 119769418 -133487165 + AT_rich Low_complexity Low_complexity 1 45 0 1996 123 17 0 chr2 119770249 119770541 -133486042 - AluSc SINE Alu -6 303 7 22 35 0 0 chr2 119771184 119771213 -133485370 + AT_rich Low_complexity Low_complexity 1 29 0 752 292 55 10 chr2 119771326 119771617 -133484966 - MER110 LTR ERV1 0 491 188 180 0 0 0 chr2 119771671 119771691 -133484892 + (A)n Simple_repeat Simple_repeat 1 20 0 1924 209 72 112 chr2 119773017 119773740 -133482843 - LTR8A LTR ERV1 0 727 34 21 0 0 0 chr2 119774630 119774651 -133481932 + AT_rich Low_complexity Low_complexity 1 21 0 246 125 0 0 chr2 119774993 119775041 -133481542 + (TA)n Simple_repeat Simple_repeat 2 49 0 22 0 0 0 chr2 119778401 119778423 -133478160 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 119778558 119778586 -133477997 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr2 119778734 119778769 -133477814 + AT_rich Low_complexity Low_complexity 1 35 0 1442 189 7 46 chr2 119779166 119779473 -133477110 - AluJo SINE Alu -17 295 1 570 211 195 11 chr2 119780224 119780409 -133476174 + MER20 DNA MER1_type 1 219 0 35 54 0 0 chr2 119781689 119781745 -133474838 + AT_rich Low_complexity Low_complexity 1 56 0 1274 153 44 29 chr2 119782180 119782454 -133474129 + L1MA7 LINE L1 6008 6285 -6 294 247 135 22 chr2 119782874 119782963 -133473620 - MIR SINE MIR -82 126 28 269 275 18 0 chr2 119783117 119783252 -133473331 + (TA)n Simple_repeat Simple_repeat 1 137 0 354 80 0 0 chr2 119783488 119783538 -133473045 + (CA)n Simple_repeat Simple_repeat 2 51 0 303 345 0 0 chr2 119783736 119783823 -133472760 - L2 LINE L2 0 3272 3186 606 372 82 20 chr2 119783985 119784482 -133472101 - L2 LINE L2 -341 2973 2446 22 35 0 0 chr2 119784643 119784672 -133471911 + AT_rich Low_complexity Low_complexity 1 29 0 2176 123 0 0 chr2 119785093 119785395 -133471188 + AluSc SINE Alu 1 302 -7 7915 51 17 4 chr2 119786148 119787604 -133468979 - L1P2 LINE L1 -350 5804 4341 2000 180 77 79 chr2 119787664 119788078 -133468505 - LTR49 LTR ERV1 -16 565 180 1997 102 0 84 chr2 119788078 119788413 -133468170 + AluSc SINE Alu 1 307 -2 2000 180 77 79 chr2 119788413 119788591 -133467992 - LTR49 LTR ERV1 -401 180 3 11804 165 48 39 chr2 119788593 119792322 -133464261 - LTR49-int LTR ERV1 0 6331 1820 366 131 16 0 chr2 119792463 119792524 -133464059 - MER34C LTR ERV1 -369 216 155 884 276 117 17 chr2 119792525 119792867 -133463716 - LTR49-int LTR ERV1 -3716 2615 751 497 188 21 10 chr2 119792884 119792980 -133463603 - MER83B-int LTR ERV1 -4169 2162 2066 404 147 11 32 chr2 119793045 119793140 -133463443 - MER83B-int LTR ERV1 -4565 1766 1674 248 172 32 11 chr2 119793153 119793246 -133463337 + (TA)n Simple_repeat Simple_repeat 1 95 0 567 168 35 56 chr2 119793386 119793529 -133463054 - MER83B-int LTR ERV1 -2686 2194 2055 1320 282 77 62 chr2 119793602 119796061 -133460522 - L1ME LINE L1 -3571 2509 26 204 333 125 14 chr2 119796923 119797067 -133459516 - L3 LINE CR1 -452 1125 966 1920 116 3 40 chr2 119797434 119797737 -133458846 - AluSc SINE Alu -17 292 1 186 388 19 0 chr2 119797740 119797843 -133458740 + MIR3 SINE MIR 83 187 -21 22 0 0 0 chr2 119798255 119798277 -133458306 + AT_rich Low_complexity Low_complexity 1 22 0 28 48 0 0 chr2 119798664 119798706 -133457877 + AT_rich Low_complexity Low_complexity 1 42 0 423 0 0 0 chr2 119798879 119798926 -133457657 + (TG)n Simple_repeat Simple_repeat 2 48 0 183 42 0 0 chr2 119799317 119799341 -133457242 + (T)n Simple_repeat Simple_repeat 1 24 0 243 0 0 0 chr2 119799837 119799864 -133456719 + (T)n Simple_repeat Simple_repeat 1 27 0 567 326 69 64 chr2 119802824 119803343 -133453240 + L3 LINE CR1 525 1046 -531 195 266 98 56 chr2 119803356 119803499 -133453084 + L2 LINE L2 3127 3275 -38 1769 181 0 7 chr2 119803864 119804195 -133452388 + AluSx SINE Alu 1 312 0 396 314 51 7 chr2 119804344 119804481 -133452102 + HAL1 LINE L1 742 884 -1623 1130 256 114 92 chr2 119804812 119805717 -133450866 + HAL1 LINE L1 1388 2312 -195 1544 255 70 25 chr2 119805727 119806240 -133450343 - MLT1F LTR MaLR -6 536 1 216 0 0 0 chr2 119806250 119806274 -133450309 + (TG)n Simple_repeat Simple_repeat 2 25 0 257 298 63 89 chr2 119807265 119807423 -133449160 + MIR3 SINE MIR 23 176 -32 553 264 26 26 chr2 119808141 119808296 -133448287 + MIR SINE MIR 21 175 -87 761 306 153 16 chr2 119809258 119809690 -133446893 - LTR16C LTR ERVL 0 491 1 1796 128 75 0 chr2 119809963 119810245 -133446338 - AluSx SINE Alu -9 303 1 25 0 0 0 chr2 119810508 119810533 -133446050 + AT_rich Low_complexity Low_complexity 1 25 0 27 0 0 0 chr2 119811132 119811159 -133445424 + AT_rich Low_complexity Low_complexity 1 27 0 353 279 34 34 chr2 119811796 119811943 -133444640 - MIR SINE MIR -44 218 72 294 312 11 79 chr2 119812121 119812310 -133444273 + L2 LINE L2 1922 2097 -1217 37 23 0 0 chr2 119812602 119812646 -133443937 + AT_rich Low_complexity Low_complexity 1 44 0 514 172 11 21 chr2 119812703 119812796 -133443787 - Tigger7 DNA MER2_type 0 2487 2396 302 198 9 26 chr2 119812798 119812914 -133443669 + (TA)n Simple_repeat Simple_repeat 1 114 0 27 0 0 0 chr2 119812952 119812979 -133443604 + AT_rich Low_complexity Low_complexity 1 27 0 1883 165 28 3 chr2 119813011 119813338 -133443245 + MER7A DNA MER2_type 14 346 0 1434 158 24 0 chr2 119813341 119813595 -133442988 - Tigger7 DNA MER2_type -90 2397 2138 577 156 83 0 chr2 119813592 119813701 -133442882 - Tigger7 DNA MER2_type -615 118 1 * 181 328 78 8 chr2 119813896 119814024 -133442559 - L2 LINE L2 -251 3062 2926 267 276 149 0 chr2 119814228 119814315 -133442268 + MER91C DNA MER1_type 4 103 -37 1629 94 153 0 chr2 119814659 119814914 -133441669 - AluY SINE Alu -7 294 1 320 283 11 11 chr2 119816334 119816426 -133440157 + MER94 DNA DNA 2 93 -41 2066 104 7 3 chr2 119817210 119817517 -133439066 - AluSq SINE Alu 0 313 1 1811 192 35 50 chr2 119817529 119818013 -133438570 - L1MB8 LINE L1 -1 6246 5770 201 94 0 0 chr2 119818040 119818072 -133438511 + (T)n Simple_repeat Simple_repeat 1 32 0 2884 250 73 11 chr2 119818200 119819282 -133437301 - L1MB8 LINE L1 -743 5472 4336 947 303 87 25 chr2 119819288 119819932 -133436651 - L1MB8 LINE L1 -2421 3794 3111 1609 181 7 19 chr2 119819977 119820286 -133436297 - AluJb SINE Alu -1 311 7 246 207 0 0 chr2 119820290 119820348 -133436235 + CT-rich Low_complexity Low_complexity 4 61 0 1419 221 16 0 chr2 119820351 119820658 -133435925 - AluJo SINE Alu 0 312 1 293 138 0 17 chr2 119820699 119820757 -133435826 + (TTTC)n Simple_repeat Simple_repeat 4 60 0 2576 282 47 35 chr2 119820769 119822641 -133433942 - L1MB8 LINE L1 -3114 3101 1259 23 0 0 0 chr2 119822726 119822749 -133433834 + AT_rich Low_complexity Low_complexity 1 23 0 821 269 0 0 chr2 119822843 119823051 -133433532 - MER3 DNA MER1_type -1 208 1 219 188 0 0 chr2 119823208 119823256 -133433327 + (TATATG)n Simple_repeat Simple_repeat 6 53 0 366 296 99 43 chr2 119823467 119823791 -133432792 - L1MC/D LINE L1 -2139 5669 5328 436 338 78 14 chr2 119825073 119825434 -133431149 + L1ME LINE L1 5319 5702 -468 2462 170 26 2 chr2 119826095 119826512 -133430071 - MSTB1 LTR MaLR -5 427 1 28 48 0 0 chr2 119826902 119826944 -133429639 + AT_rich Low_complexity Low_complexity 1 42 0 2058 97 0 4 chr2 119828297 119828576 -133428007 + AluSg SINE Alu 1 278 -32 189 0 0 0 chr2 119828578 119828599 -133427984 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 205 298 68 77 chr2 119829615 119829863 -133426720 + L2 LINE L2 2256 2501 -813 22 56 0 0 chr2 119830328 119830364 -133426219 + AT_rich Low_complexity Low_complexity 1 36 0 225 0 0 0 chr2 119831659 119831684 -133424899 + (A)n Simple_repeat Simple_repeat 1 25 0 1424 267 58 50 chr2 119832371 119832970 -133423613 - MER21B LTR ERV1 -124 739 136 529 213 11 0 chr2 119833065 119833159 -133423424 - MER21B LTR ERV1 -767 96 2 212 77 26 0 chr2 119833228 119833267 -133423316 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 23 0 0 0 chr2 119833880 119833903 -133422680 + AT_rich Low_complexity Low_complexity 1 23 0 1529 180 79 75 chr2 119835397 119836235 -133420348 + L1MD1 LINE L1 4749 5606 -636 1651 66 19 0 chr2 119836235 119836447 -133420136 - L1P2 LINE L1 -406 5748 5533 255 0 0 0 chr2 119836436 119836466 -133420117 + L1P1 LINE L1 5747 5776 -379 * 1301 35 6 12 chr2 119836466 119836661 -133419922 + L1PA5 LINE L1 5987 6154 0 2496 193 33 70 chr2 119836712 119837387 -133419196 + L1MD1 LINE L1 5593 6242 0 1626 144 70 0 chr2 119837455 119837712 -133418871 - AluSq SINE Alu -36 277 3 22 70 0 0 chr2 119837721 119837764 -133418819 + AT_rich Low_complexity Low_complexity 1 43 0 22 56 0 0 chr2 119838256 119838292 -133418291 + AT_rich Low_complexity Low_complexity 1 36 0 24 67 0 0 chr2 119838419 119838464 -133418119 + AT_rich Low_complexity Low_complexity 1 45 0 1444 140 9 9 chr2 119838730 119838984 -133417599 + AluSg/x SINE Alu 72 325 0 696 233 28 17 chr2 119838990 119839166 -133417417 - MER5B DNA MER1_type 0 178 1 648 216 105 0 chr2 119839432 119839603 -133416980 + MER5A DNA MER1_type 1 189 0 810 237 154 35 chr2 119839923 119840294 -133416289 - L1ME3A LINE L1 -5 6165 5751 298 271 78 23 chr2 119840523 119840652 -133415931 - MIR SINE MIR -121 141 6 25 51 0 0 chr2 119841285 119841324 -133415259 + AT_rich Low_complexity Low_complexity 1 39 0 24 0 0 0 chr2 119842348 119842372 -133414211 + AT_rich Low_complexity Low_complexity 1 24 0 9767 28 0 0 chr2 119842372 119844305 -133412278 - L1PA3 LINE L1 -1 6154 4223 503 270 107 50 chr2 119844338 119844878 -133411705 - L1ME4a LINE L1 -18 6103 5533 1178 299 58 9 chr2 119845967 119846429 -133410154 - MLT1F LTR MaLR -39 503 19 387 344 63 52 chr2 119846511 119847031 -133409552 + L3 LINE CR1 493 1018 -559 1077 179 91 27 chr2 119847037 119847333 -133409250 + MER33 DNA MER1_type 10 324 0 518 314 75 48 chr2 119847459 119847793 -133408790 + L3 LINE CR1 1189 1531 -46 180 302 48 16 chr2 119848635 119848698 -133407885 + L2 LINE L2 3208 3272 0 371 274 0 9 chr2 119849513 119849619 -133406964 - L1ME3A LINE L1 -355 5766 5662 227 182 0 0 chr2 119849716 119849760 -133406823 + (TG)n Simple_repeat Simple_repeat 1 44 0 265 337 74 0 chr2 119849807 119849902 -133406681 - MIR SINE MIR -67 141 40 513 255 76 49 chr2 119849962 119850146 -133406437 - L2 LINE L2 -4 3309 3121 1259 254 77 56 chr2 119850183 119850702 -133405881 - L1MD2 LINE L1 -30 6329 5800 430 318 195 14 chr2 119850714 119851011 -133405572 - L2 LINE L2 -197 3116 2778 191 347 42 0 chr2 119853794 119853866 -133402717 - L2 LINE L2 -327 2945 2871 1691 175 31 0 chr2 119855753 119856044 -133400539 + AluJb SINE Alu 1 300 -12 483 359 74 36 chr2 119857633 119858104 -133398479 + L2 LINE L2 2369 2857 -457 515 267 24 115 chr2 119859144 119859474 -133397109 + MER102b DNA MER1_type 33 332 -9 253 258 0 15 chr2 119860433 119860499 -133396084 - MLT1L LTR MaLR -425 190 126 22 0 0 0 chr2 119860895 119860917 -133395666 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 119860984 119861006 -133395577 + AT_rich Low_complexity Low_complexity 1 22 0 369 0 0 0 chr2 119862263 119862304 -133394279 + (CA)n Simple_repeat Simple_repeat 1 41 0 571 277 113 45 chr2 119863560 119863983 -133392600 - MER34 LTR ERV1 -90 452 1 1462 126 13 17 chr2 119864511 119864742 -133391841 - MER30 DNA MER1_type 0 230 1 186 43 0 0 chr2 119865415 119865438 -133391145 + (TC)n Simple_repeat Simple_repeat 2 24 0 191 355 116 17 chr2 119866682 119866854 -133389729 - MER5A DNA MER1_type 0 189 1 26 0 0 0 chr2 119867818 119867844 -133388739 + AT_rich Low_complexity Low_complexity 1 26 0 2301 54 0 4 chr2 119868384 119868661 -133387922 + AluY SINE Alu 36 311 0 24 0 0 0 chr2 119868681 119868705 -133387878 + AT_rich Low_complexity Low_complexity 1 24 0 641 140 0 0 chr2 119868957 119869057 -133387526 - AluJb SINE Alu -15 297 198 2240 94 3 35 chr2 119869406 119869724 -133386859 + AluSx SINE Alu 1 308 -4 1071 362 90 15 chr2 119870211 119871010 -133385573 + L2 LINE L2 253 1111 -2203 218 299 0 30 chr2 119871884 119871951 -133384632 + MIR SINE MIR 50 114 -148 223 140 18 53 chr2 119872572 119872629 -133383954 + T-rich Low_complexity Low_complexity 6 60 0 227 295 0 0 chr2 119872865 119872926 -133383657 - L1ME LINE L1 -299 5822 5762 205 189 0 0 chr2 119873469 119873506 -133383077 + (TATG)n Simple_repeat Simple_repeat 2 38 0 2840 257 140 36 chr2 119873544 119874113 -133382470 - L1MD3 LINE L1 -7 8035 7527 2126 128 0 6 chr2 119874113 119874425 -133382158 - AluSx SINE Alu 0 312 3 2840 257 140 36 chr2 119874425 119874756 -133381827 - L1MD3 LINE L1 -515 7527 7232 210 118 0 0 chr2 119874756 119874790 -133381793 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 2840 257 140 36 chr2 119874790 119875398 -133381185 - L1MD3 LINE L1 -810 7232 6373 2038 269 49 32 chr2 119875506 119876242 -133380341 - L1MC4a LINE L1 -1612 6196 5474 2223 87 0 10 chr2 119876242 119876542 -133380041 + AluSx SINE Alu 10 306 -6 2124 118 0 0 chr2 119876544 119876840 -133379743 + AluSc SINE Alu 3 298 -11 2038 269 49 32 chr2 119876840 119876981 -133379602 - L1MC4a LINE L1 -2334 5474 5301 398 346 43 6 chr2 119877412 119877574 -133379009 - MIR SINE MIR -80 182 15 23 68 0 0 chr2 119877781 119877825 -133378758 + AT_rich Low_complexity Low_complexity 1 44 0 1847 141 13 3 chr2 119879566 119879871 -133376712 - L1PA16 LINE L1 -3 6163 5856 308 250 69 35 chr2 119880040 119880184 -133376399 - L1ME4a LINE L1 0 6121 5973 207 0 0 0 chr2 119880188 119880211 -133376372 + (TG)n Simple_repeat Simple_repeat 2 24 0 274 272 18 35 chr2 119880799 119880913 -133375670 + (TATATG)n Simple_repeat Simple_repeat 2 113 0 2296 44 0 0 chr2 119881666 119881936 -133374647 - AluY SINE Alu -41 270 1 1688 139 121 0 chr2 119881936 119882209 -133374374 - AluSx SINE Alu -6 306 1 343 358 76 62 chr2 119882764 119883119 -133373464 + L2 LINE L2 2909 3268 -4 1119 215 80 118 chr2 119884000 119884525 -133372058 + MLT1D LTR MaLR 1 505 0 284 341 7 43 chr2 119885667 119885805 -133370778 + MIR SINE MIR 37 169 -93 1843 183 10 70 chr2 119885904 119886319 -133370264 - MLT1B LTR MaLR 0 390 1 204 216 0 0 chr2 119886702 119886739 -133369844 + (CA)n Simple_repeat Simple_repeat 2 38 0 355 257 133 35 chr2 119887197 119887310 -133369273 - MER5A DNA MER1_type 0 189 66 751 231 129 18 chr2 119887354 119887579 -133369004 - MIR SINE MIR -5 257 8 185 268 0 0 chr2 119887697 119887738 -133368845 - L2 LINE L2 -19 3294 3254 310 263 0 61 chr2 119887977 119888091 -133368492 - L1MC4 LINE L1 -2 8040 7934 2287 116 52 6 chr2 119888168 119888530 -133368053 - L1PA10 LINE L1 -4 6164 5786 22 0 0 0 chr2 119888875 119888897 -133367686 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 119889106 119889128 -133367455 + AT_rich Low_complexity Low_complexity 1 22 0 715 337 107 13 chr2 119889128 119889576 -133367007 + L2 LINE L2 2819 3308 -5 236 284 12 12 chr2 119889578 119889659 -133366924 - MIR SINE MIR -118 144 64 258 331 24 65 chr2 119889951 119890164 -133366419 - MIR SINE MIR -56 206 2 3990 154 21 18 chr2 119890520 119891229 -133365354 - MER50 LTR ERV1 -23 711 1 1348 277 72 63 chr2 119891874 119892416 -133364167 - MLT1H1 LTR MaLR 0 555 9 397 279 76 10 chr2 119892720 119892917 -133363666 + MER113 DNA MER1_type? 4 213 -308 250 309 18 9 chr2 119892997 119893107 -133363476 + GA-rich Low_complexity Low_complexity 3 113 0 482 198 52 0 chr2 119893107 119893203 -133363380 + MER58C DNA MER1_type 114 214 -1 281 265 72 72 chr2 119893373 119893539 -133363044 + MLT1J1 LTR MaLR 63 228 -218 223 191 43 0 chr2 119894182 119894229 -133362354 + CT-rich Low_complexity Low_complexity 4 52 0 580 289 22 69 chr2 119894302 119894666 -133361917 - L1MC4a LINE L1 -1755 6053 5707 2076 119 0 14 chr2 119894672 119894958 -133361625 + AluSx SINE Alu 1 282 -30 518 302 0 19 chr2 119895076 119895235 -133361348 - L1MC4a LINE L1 -2155 5653 5498 212 0 36 0 chr2 119895299 119895327 -133361256 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 21 57 0 0 chr2 119895480 119895515 -133361068 + AT_rich Low_complexity Low_complexity 1 35 0 379 228 50 0 chr2 119895515 119895616 -133360967 - L1MA9 LINE L1 -22 6290 6185 1174 111 29 143 chr2 119895623 119895725 -133360858 - L1MA9 LINE L1 -231 6081 5969 2068 78 0 4 chr2 119895725 119895995 -133360588 - AluY SINE Alu -8 303 35 1174 111 29 143 chr2 119895995 119896171 -133360412 - L1MA9 LINE L1 -343 5969 5835 934 133 0 105 chr2 119896167 119896377 -133360206 + L1MA9 LINE L1 5657 5844 -468 * 262 290 23 8 chr2 119896368 119896499 -133360084 - L1MC4a LINE L1 -2421 5387 5255 * 21 0 0 0 chr2 119897024 119897045 -133359538 + AT_rich Low_complexity Low_complexity 1 21 0 418 368 82 26 chr2 119897908 119898286 -133358297 + L3 LINE CR1 417 815 -762 306 0 0 0 chr2 119898783 119898817 -133357766 + (TTA)n Simple_repeat Simple_repeat 3 36 0 1214 59 0 0 chr2 119898817 119898969 -133357614 - L1PA5 LINE L1 -18 6136 5985 189 171 0 0 chr2 119949090 119949125 -133307458 + (TTG)n Simple_repeat Simple_repeat 2 36 0 266 298 44 9 chr2 119949209 119949323 -133307260 + L1MC1 LINE L1 5538 5655 -466 660 156 11 39 chr2 119949777 119949957 -133306626 + CT-rich Low_complexity Low_complexity 3 177 0 2848 192 9 6 chr2 119951223 119951764 -133304819 + L1MC1 LINE L1 5771 6313 -20 24 32 0 0 chr2 119951770 119951801 -133304782 + AT_rich Low_complexity Low_complexity 1 31 0 206 320 58 0 chr2 119953350 119953453 -133303130 + MIR SINE MIR 154 262 0 223 398 9 9 chr2 119953667 119953780 -133302803 + L2 LINE L2 3179 3291 -22 22 80 0 0 chr2 119953857 119953907 -133302676 + AT_rich Low_complexity Low_complexity 1 50 0 2890 219 19 34 chr2 119954114 119954761 -133301822 - MER82 DNA MER2_type -10 643 7 441 54 0 0 chr2 119955684 119955740 -133300843 + (TAGA)n Simple_repeat Simple_repeat 3 58 0 181 258 169 65 chr2 119956853 119956977 -133299606 - L2 LINE L2 -6 3307 3171 186 43 0 0 chr2 119958220 119958243 -133298340 + (TTTTTA)n Simple_repeat Simple_repeat 3 25 0 1726 163 28 3 chr2 119958321 119958603 -133297980 - AluSx SINE Alu -23 289 1 826 260 82 41 chr2 119958612 119959198 -133297385 - L1ME LINE L1 -472 5698 5081 236 240 170 53 chr2 119959532 119959874 -133296709 - L1ME LINE L1 -1463 4683 4302 239 250 142 25 chr2 119960537 119960657 -133295926 + MIR SINE MIR 53 186 -76 30 69 0 0 chr2 119961553 119961611 -133294972 + AT_rich Low_complexity Low_complexity 1 58 0 541 319 61 24 chr2 119961620 119961833 -133294750 + MIR SINE MIR 32 252 -10 10166 204 65 26 chr2 119962500 119963225 -133293358 + L1MB8 LINE L1 14 710 -5672 2510 114 17 6 chr2 119963225 119963585 -133292998 - THE1B LTR MaLR 0 364 1 10166 204 65 26 chr2 119963585 119965593 -133290990 + L1MB8 LINE L1 710 2891 -3491 2282 79 13 0 chr2 119965593 119965897 -133290686 + AluY SINE Alu 1 308 -3 10166 204 65 26 chr2 119965897 119966282 -133290301 + L1MB8 LINE L1 2891 3260 -3122 492 253 54 12 chr2 119966282 119966448 -133290135 + MLT1A2 LTR MaLR 1 173 -217 265 229 0 0 chr2 119966451 119966512 -133290071 + CT-rich Low_complexity Low_complexity 2 62 0 717 224 62 22 chr2 119966531 119966710 -133289873 + MLT1A2 LTR MaLR 189 374 0 6100 245 47 47 chr2 119966727 119967252 -133289331 + L1MB8 LINE L1 3272 3796 -2586 1868 109 0 26 chr2 119967252 119967517 -133289066 + AluSx SINE Alu 44 301 -11 6100 245 47 47 chr2 119967517 119967784 -133288799 + L1MB8 LINE L1 3796 4062 -2320 2259 155 72 2 chr2 119967784 119968184 -133288399 - MSTA LTR MaLR 0 428 1 6100 245 47 47 chr2 119968184 119969744 -133286839 + L1MB8 LINE L1 4061 5625 -757 2648 193 45 42 chr2 119970119 119970746 -133285837 + L1MB8 LINE L1 5759 6387 -27 34 0 0 0 chr2 119971085 119971119 -133285464 + AT_rich Low_complexity Low_complexity 1 34 0 2078 189 41 43 chr2 119971234 119971699 -133284884 - MLT2C2 LTR ERVL 0 464 1 814 236 104 14 chr2 119975018 119975306 -133281277 + L1M4 LINE L1 2512 2825 -3321 378 0 0 0 chr2 119975311 119975353 -133281230 + (CA)n Simple_repeat Simple_repeat 2 43 0 305 232 57 88 chr2 119975431 119975627 -133280956 + L1MC/D LINE L1 5639 5824 -297 22 35 0 0 chr2 119975733 119975762 -133280821 + AT_rich Low_complexity Low_complexity 1 29 0 297 286 46 110 chr2 119976875 119977221 -133279362 + L1ME LINE L1 43 366 -5704 259 250 35 35 chr2 119977273 119977389 -133279194 + L1ME LINE L1 716 831 -5239 568 263 101 61 chr2 119977456 119978255 -133278328 + L1ME LINE L1 828 1694 -4386 189 0 0 0 chr2 119979806 119979827 -133276756 + (T)n Simple_repeat Simple_repeat 1 21 0 1811 151 39 6 chr2 119979854 119980165 -133276418 - MER1A DNA MER1_type 0 529 209 1164 241 114 3 chr2 119980308 119980649 -133275934 - MER58D DNA MER1_type -1 385 7 27 0 0 0 chr2 119980815 119980842 -133275741 + AT_rich Low_complexity Low_complexity 1 27 0 195 357 71 49 chr2 119980866 119981191 -133275392 - L2 LINE L2 -2881 433 102 1973 121 3 7 chr2 119982436 119982734 -133273849 + AluSg SINE Alu 5 301 -9 2384 90 3 0 chr2 119982742 119983052 -133273531 + AluSp SINE Alu 1 311 -2 649 24 47 12 chr2 119984409 119984529 -133272054 + L1PA4 LINE L1 6052 6174 0 632 189 65 20 chr2 119984529 119984682 -133271901 + MIR SINE MIR 22 181 -81 336 222 89 44 chr2 119985372 119985507 -133271076 - MIR SINE MIR -73 189 49 216 272 0 12 chr2 119985608 119985689 -133270894 + T-rich Low_complexity Low_complexity 5 84 0 300 318 23 0 chr2 119985821 119985909 -133270674 + L2 LINE L2 3218 3307 -6 232 346 38 38 chr2 119986938 119987071 -133269512 - L1ME3A LINE L1 -83 6087 5955 1028 226 25 51 chr2 119987075 119987349 -133269234 - L1ME3A LINE L1 -446 5724 5458 27 49 0 0 chr2 119987570 119987611 -133268972 + AT_rich Low_complexity Low_complexity 1 41 0 3945 179 35 4 chr2 119988644 119989380 -133267203 + L1MB1 LINE L1 5403 6161 -7 1692 206 21 0 chr2 119989532 119989871 -133266712 - MER7A DNA MER2_type -1 345 2 327 244 17 35 chr2 119989908 119990023 -133266560 - LTR33A LTR ERVL 0 523 411 180 0 0 0 chr2 119990715 119990735 -133265848 + (TTG)n Simple_repeat Simple_repeat 2 21 0 531 284 58 58 chr2 119991251 119991512 -133265071 - MLT1I LTR MaLR 0 409 149 2051 176 65 5 chr2 119991800 119992197 -133264386 - MSTA LTR MaLR -7 421 1 181 279 49 33 chr2 119993041 119993102 -133263481 - L3 LINE CR1 -15 1562 1501 229 222 19 0 chr2 119993263 119993317 -133263266 + (CTA)n Simple_repeat Simple_repeat 3 57 0 460 350 107 0 chr2 119993487 119993684 -133262899 - MIR SINE MIR -41 221 4 3583 94 17 4 chr2 119994653 119994814 -133261769 + L1PB1 LINE L1 5625 5782 -369 357 24 0 0 chr2 119994814 119994856 -133261727 + (CA)n Simple_repeat Simple_repeat 2 43 0 3583 94 17 4 chr2 119994856 119995214 -133261369 + L1PB1 LINE L1 5782 6151 0 2279 86 3 3 chr2 119995636 119995939 -133260644 - AluSp SINE Alu -10 303 1 294 283 123 57 chr2 119996221 119996627 -133259956 + L1M4 LINE L1 3268 3700 -2446 546 218 55 7 chr2 119997292 119997450 -133259133 - L1MB2 LINE L1 -1 6170 6030 925 244 0 14 chr2 119997683 119997896 -133258687 - L1MB2 LINE L1 -143 6028 5819 339 336 25 10 chr2 119998371 119998546 -133258037 + CT-rich Low_complexity Low_complexity 4 286 0 217 289 83 33 chr2 119999733 119999854 -133256729 - L2 LINE L2 0 3313 3187 215 241 17 0 chr2 119999908 119999966 -133256617 + (TATATG)n Simple_repeat Simple_repeat 1 59 0 1074 241 0 36 chr2 120000457 120000735 -133255848 + AluJo SINE Alu 10 277 -35 284 70 23 0 chr2 120000749 120000792 -133255791 + (GA)n Simple_repeat Simple_repeat 2 45 0 285 289 14 99 chr2 120001890 120001909 -133254674 - MIR SINE MIR -130 132 113 1623 161 3 51 chr2 120001909 120002042 -133254541 + AluJb SINE Alu 3 141 -171 2239 100 7 0 chr2 120002042 120002333 -133254250 + AluSc SINE Alu 1 293 -16 1623 161 3 51 chr2 120002333 120002515 -133254068 + AluJb SINE Alu 141 303 -9 285 289 14 99 chr2 120002515 120002637 -133253946 - MIR SINE MIR -149 113 3 257 163 0 0 chr2 120004252 120004295 -133252288 - L2 LINE L2 -2 3311 3269 375 342 77 4 chr2 120004321 120004555 -133252028 - L2 LINE L2 -1316 1998 1748 24 53 0 0 chr2 120004869 120004907 -133251676 + AT_rich Low_complexity Low_complexity 1 38 0 2235 110 7 0 chr2 120005340 120005650 -133250933 + AluSx SINE Alu 1 312 0 232 229 16 0 chr2 120005679 120005740 -133250843 - L1MC4 LINE L1 -1356 6686 6625 860 329 90 35 chr2 120006327 120006480 -133250103 - ERVL LTR ERVL -402 5362 5219 1873 121 16 48 chr2 120006480 120006794 -133249789 - AluSx SINE Alu -8 304 1 860 329 90 35 chr2 120006794 120007589 -133248994 - ERVL LTR ERVL -545 5219 4318 1442 340 65 15 chr2 120007824 120008874 -133247709 - ERVL LTR ERVL -1556 3929 2808 637 298 168 18 chr2 120009862 120010255 -133246328 - LTR33 LTR ERVL -69 452 1 281 202 116 70 chr2 120011217 120011346 -133245237 + MER103 DNA DNA 1 135 -31 225 303 126 17 chr2 120013083 120013202 -133243381 - MIR SINE MIR -56 152 21 184 217 0 106 chr2 120014827 120014970 -133241613 + MER5A DNA MER1_type 6 189 0 425 218 53 76 chr2 120015037 120015209 -133241374 - MER5A DNA MER1_type -20 158 1 229 143 0 41 chr2 120016600 120016649 -133239934 + (TTTC)n Simple_repeat Simple_repeat 4 50 0 270 0 0 0 chr2 120016715 120016745 -133239838 + (TTTG)n Simple_repeat Simple_repeat 4 33 0 245 321 132 9 chr2 120018448 120018554 -133238029 + MIR SINE MIR 16 134 -74 2285 104 0 0 chr2 120018554 120018852 -133237731 - AluY SINE Alu -13 298 1 23 54 0 0 chr2 120018987 120019024 -133237559 + AT_rich Low_complexity Low_complexity 1 37 0 25 31 0 0 chr2 120019145 120019177 -133237406 + AT_rich Low_complexity Low_complexity 1 32 0 2183 117 0 3 chr2 120022749 120023057 -133233526 - AluSg SINE Alu -3 307 1 370 140 35 0 chr2 120023119 120023176 -133233407 - 5S rRNA rRNA -62 59 1 204 253 0 0 chr2 120023889 120023964 -133232619 + (TA)n Simple_repeat Simple_repeat 2 76 0 186 43 0 0 chr2 120023977 120024000 -133232583 + (TCTA)n Simple_repeat Simple_repeat 4 26 0 406 363 44 32 chr2 120024898 120025303 -133231280 + L1ME2 LINE L1 35 444 -5952 231 284 72 58 chr2 120025550 120025758 -133230825 + L1ME2 LINE L1 661 871 -5334 771 118 7 15 chr2 120025776 120025911 -133230672 + L1MA4 LINE L1 6167 6300 0 1015 252 21 0 chr2 120025914 120026156 -133230427 - L1ME2 LINE L1 -13 6151 5905 326 217 97 0 chr2 120026160 120026304 -133230279 + L1ME2 LINE L1 885 1044 -5161 * 1472 206 13 0 chr2 120026296 120026606 -133229977 + L1MA5 LINE L1 4811 5124 -1022 1198 196 4 4 chr2 120026607 120026832 -133229751 + L1MA5 LINE L1 5544 5768 -535 2576 177 14 6 chr2 120026931 120027444 -133229139 + L1MA5 LINE L1 5784 6300 0 26 104 0 0 chr2 120027482 120027578 -133229005 + AT_rich Low_complexity Low_complexity 1 96 0 1905 194 33 13 chr2 120027665 120028061 -133228522 - MSTD LTR MaLR 0 396 8 2506 257 86 61 chr2 120028103 120028233 -133228350 + L1ME2 LINE L1 3660 3785 -2446 2006 151 19 40 chr2 120028233 120028605 -133227978 - THE1B LTR MaLR 0 364 1 2506 257 86 61 chr2 120028605 120030236 -133226347 + L1ME2 LINE L1 3785 5461 -770 654 242 8 0 chr2 120030236 120030368 -133226215 + FLAM_C SINE Alu 1 133 0 2506 257 86 61 chr2 120030368 120030592 -133225991 + L1ME2 LINE L1 5461 5678 -553 204 200 0 0 chr2 120030630 120030675 -133225908 + (CATATA)n Simple_repeat Simple_repeat 4 48 0 2236 99 6 10 chr2 120030688 120031002 -133225581 + AluSp SINE Alu 1 313 0 1428 219 96 41 chr2 120031014 120031503 -133225080 + L1ME2 LINE L1 5697 6212 -21 2298 103 0 0 chr2 120031776 120032076 -133224507 + AluSx SINE Alu 4 303 -9 589 193 18 9 chr2 120032082 120032196 -133224387 + FLAM_C SINE Alu 1 115 -18 26 50 0 0 chr2 120032196 120032236 -133224347 + AT_rich Low_complexity Low_complexity 1 40 0 25 31 0 0 chr2 120032728 120032760 -133223823 + AT_rich Low_complexity Low_complexity 1 32 0 356 335 176 22 chr2 120034180 120034679 -133221904 + L2 LINE L2 2133 2708 -606 473 254 42 0 chr2 120036978 120037096 -133219487 - L2 LINE L2 -4 3309 3187 198 0 0 0 chr2 120037097 120037119 -133219464 + (CATA)n Simple_repeat Simple_repeat 3 24 0 280 81 0 0 chr2 120037133 120037170 -133219413 + MADE1 DNA Mariner 3 39 -41 225 0 0 0 chr2 120037245 120037270 -133219313 + (TG)n Simple_repeat Simple_repeat 2 26 0 250 132 59 29 chr2 120037272 120037340 -133219243 - LTR66 LTR ERVL -171 439 370 305 87 0 0 chr2 120037340 120037386 -133219197 - MADE1 DNA Mariner -32 48 3 228 245 19 0 chr2 120037386 120037439 -133219144 + (CATA)n Simple_repeat Simple_repeat 1 54 0 378 98 0 0 chr2 120037439 120037490 -133219093 - MADE1 DNA Mariner -27 53 3 341 257 239 59 chr2 120037507 120037561 -133219022 - L2 LINE L2 -134 3179 3136 2181 154 59 10 chr2 120037561 120037969 -133218614 - MSTA LTR MaLR 0 428 1 341 257 239 59 chr2 120037969 120038271 -133218312 - L2 LINE L2 -177 3136 2787 384 231 0 22 chr2 120038420 120038554 -133218029 + (TA)n Simple_repeat Simple_repeat 1 131 0 356 227 8 42 chr2 120039745 120039864 -133216719 + L1MC4a LINE L1 5723 5837 -1971 485 158 0 5 chr2 120041028 120041120 -133215463 - L1MA3 LINE L1 -187 6113 6023 539 283 69 96 chr2 120041681 120042015 -133214568 - L1ME4a LINE L1 -18 6103 5789 2075 102 7 0 chr2 120042015 120042332 -133214251 - AluSq SINE Alu 0 319 1 539 283 69 96 chr2 120042332 120042590 -133213993 - L1ME4a LINE L1 -332 5789 5526 303 306 25 0 chr2 120043272 120043393 -133213190 - L1ME LINE L1 -430 5691 5568 339 25 0 0 chr2 120045160 120045200 -133211383 + (CA)n Simple_repeat Simple_repeat 2 41 0 364 252 188 28 chr2 120045898 120046116 -133210467 + L1M4 LINE L1 2778 3030 -3116 554 345 117 10 chr2 120046171 120046693 -133209890 + L1M4 LINE L1 3115 3692 -2454 341 277 81 55 chr2 120046781 120047052 -133209531 + L1M4 LINE L1 3812 4089 -2057 2839 47 100 3 chr2 120047124 120047504 -133209079 - L1PA7 LINE L1 -14 6140 5724 210 118 0 0 chr2 120048446 120048480 -133208103 + (CA)n Simple_repeat Simple_repeat 1 34 0 469 200 0 0 chr2 120050631 120050731 -133205852 + L1MB4 LINE L1 6070 6169 -11 26 74 0 0 chr2 120051114 120051168 -133205415 + AT_rich Low_complexity Low_complexity 1 54 0 23 33 0 0 chr2 120051602 120051632 -133204951 + AT_rich Low_complexity Low_complexity 1 30 0 213 262 16 0 chr2 120053991 120054052 -133202531 + CT-rich Low_complexity Low_complexity 3 64 0 636 261 40 50 chr2 120054097 120054319 -133202264 - MIR SINE MIR -38 224 5 255 240 13 0 chr2 120055296 120055371 -133201212 + L1M LINE L1 5347 5422 -699 910 201 6 6 chr2 120055768 120055942 -133200641 - AluSp SINE Alu -138 175 2 2223 243 32 11 chr2 120056398 120057019 -133199564 - L1P LINE L1 -2446 3700 3067 21 0 0 0 chr2 120057613 120057634 -133198949 + AT_rich Low_complexity Low_complexity 1 21 0 1030 304 106 34 chr2 120057642 120059082 -133197501 + L1MEc LINE L1 100 1453 -4764 346 233 90 23 chr2 120059185 120059318 -133197265 + L1MEc LINE L1 2944 3085 -3130 2142 278 123 35 chr2 120059326 120059946 -133196637 + L1MEc LINE L1 3008 3572 -2643 2466 62 0 7 chr2 120059946 120060252 -133196331 + AluY SINE Alu 1 304 -7 2142 278 123 35 chr2 120060252 120061058 -133195525 + L1MEc LINE L1 3572 4559 -1656 310 283 20 0 chr2 120061068 120061167 -133195416 + (TA)n Simple_repeat Simple_repeat 1 101 0 234 167 31 146 chr2 120061167 120061183 -133195400 + L1MEc LINE L1 4593 4609 -1606 2772 3 3 0 chr2 120061183 120061489 -133195094 - AluYb8 SINE Alu -11 307 1 234 167 31 146 chr2 120061489 120061568 -133195015 + L1MEc LINE L1 4609 4677 -1538 417 234 0 8 chr2 120061611 120061735 -133194848 - L1MEc LINE L1 -5236 1160 1038 268 245 38 38 chr2 120061833 120061939 -133194644 - L1MEc LINE L1 -5557 839 734 222 360 58 0 chr2 120062027 120062113 -133194470 - L2 LINE L2 -674 2640 2550 773 319 4 9 chr2 120063211 120063437 -133193146 + MIR SINE MIR 8 232 -30 23 33 0 0 chr2 120063484 120063514 -133193069 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr2 120063556 120063578 -133193005 + AT_rich Low_complexity Low_complexity 1 22 0 263 125 0 231 chr2 120064533 120064637 -133191946 + MADE1 DNA Mariner 1 80 0 22 0 0 0 chr2 120065182 120065204 -133191379 + AT_rich Low_complexity Low_complexity 1 22 0 201 196 0 0 chr2 120067523 120067574 -133189009 + (TAAA)n Simple_repeat Simple_repeat 3 53 0 250 337 128 31 chr2 120067828 120068024 -133188559 - MIR SINE MIR -1 261 47 270 207 0 0 chr2 120069033 120069091 -133187492 + (TA)n Simple_repeat Simple_repeat 2 59 0 22 0 0 0 chr2 120070453 120070475 -133186108 + AT_rich Low_complexity Low_complexity 1 22 0 43652 40 1 0 chr2 120070542 120076684 -133179899 - L1PA4 LINE L1 0 6155 7 2174 111 0 0 chr2 120076686 120076984 -133179599 - AluSq SINE Alu -14 299 2 218 298 0 24 chr2 120077044 120077128 -133179455 - MIR SINE MIR -108 154 73 317 271 45 45 chr2 120079589 120079722 -133176861 - MIR SINE MIR -16 246 114 2420 52 3 0 chr2 120080996 120081287 -133175296 + AluY SINE Alu 5 296 -15 248 0 31 0 chr2 120083571 120083603 -133172980 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 21 57 0 0 chr2 120083709 120083744 -133172839 + AT_rich Low_complexity Low_complexity 1 35 0 1742 173 10 74 chr2 120084024 120084074 -133172509 - MLT1B LTR MaLR 0 390 338 2506 4 0 0 chr2 120084074 120084348 -133172235 - AluYb8 SINE Alu -1 317 44 1742 173 10 74 chr2 120084348 120084714 -133171869 - MLT1B LTR MaLR -52 338 1 403 227 80 0 chr2 120086533 120086621 -133169962 - MER5A DNA MER1_type -86 103 9 253 164 75 0 chr2 120087006 120087073 -133169510 + LTR66 LTR ERVL 371 442 -168 554 310 87 45 chr2 120087173 120087531 -133169052 - L2 LINE L2 0 3313 2941 842 76 0 61 chr2 120087838 120087970 -133168613 - L1P5 LINE L1 -505 5646 5523 562 320 66 19 chr2 120088050 120088562 -133168021 - L1M4 LINE L1 -3586 2796 2258 1223 280 50 11 chr2 120088573 120089012 -133167571 - L1ME1 LINE L1 -340 5809 5354 266 81 0 0 chr2 120089157 120089194 -133167389 - L1MB7 LINE L1 -19 6165 6129 673 231 13 49 chr2 120089217 120089442 -133167141 - L1ME1 LINE L1 -1400 4729 4513 759 311 117 28 chr2 120089520 120090083 -133166500 - L1ME1 LINE L1 -4867 1252 640 21 0 0 0 chr2 120090178 120090199 -133166384 + AT_rich Low_complexity Low_complexity 1 21 0 3218 82 0 11 chr2 120091162 120091615 -133164968 - L1PA8 LINE L1 -1 6171 5724 1603 233 30 130 chr2 120092515 120092644 -133163939 - L1MEc LINE L1 -3483 2732 2592 2384 157 48 40 chr2 120092644 120093148 -133163435 - LTR54 LTR ERV1 0 510 3 1603 233 30 130 chr2 120093148 120093302 -133163281 - L1MEc LINE L1 -3623 2592 2424 1968 107 4 0 chr2 120093302 120093565 -133163018 + AluSx SINE Alu 1 264 -48 1603 233 30 130 chr2 120093565 120094264 -133162319 - L1MEc LINE L1 -3791 2424 1657 300 111 0 0 chr2 120094264 120094309 -133162274 + (TA)n Simple_repeat Simple_repeat 1 45 0 1603 233 30 130 chr2 120094309 120094447 -133162136 - L1MEc LINE L1 -4558 1657 1507 2227 109 0 3 chr2 120094447 120094758 -133161825 - AluSx SINE Alu -2 310 1 1603 233 30 130 chr2 120094758 120095474 -133161109 - L1MEc LINE L1 -4708 1507 1116 599 314 6 6 chr2 120095476 120095651 -133160932 - L1MEc LINE L1 -6167 229 55 24 32 0 0 chr2 120095668 120095699 -133160884 + AT_rich Low_complexity Low_complexity 1 31 0 443 323 108 62 chr2 120096082 120096682 -133159901 - L1M4 LINE L1 -1175 4971 4344 32 0 0 0 chr2 120096819 120096851 -133159732 + AT_rich Low_complexity Low_complexity 1 32 0 2265 98 0 7 chr2 120096935 120097240 -133159343 + AluSq SINE Alu 1 303 -10 648 254 42 73 chr2 120097328 120097683 -133158900 - L2 LINE L2 0 3313 2970 2053 92 33 0 chr2 120098097 120098399 -133158184 - AluSg SINE Alu 0 311 1 1530 176 10 7 chr2 120099073 120099362 -133157221 + AluJb SINE Alu 5 294 -18 183 341 111 16 chr2 120099559 120099685 -133156898 - MER5B DNA MER1_type 0 178 41 413 309 173 0 chr2 120099781 120099920 -133156663 + MER5A DNA MER1_type 27 189 0 1854 169 14 17 chr2 120100384 120100745 -133155838 + MER46B DNA MER2_type 1 235 -1 380 331 96 7 chr2 120101162 120101298 -133155285 + MER5B DNA MER1_type 12 159 -19 2075 208 32 72 chr2 120101582 120101666 -133154917 - MER34C LTR ERV1 -10 575 489 1991 48 8 146 chr2 120101666 120102023 -133154560 + AluY SINE Alu 1 308 -3 2075 208 32 72 chr2 120102023 120102535 -133154048 - MER34C LTR ERV1 -96 489 3 249 33 0 0 chr2 120102948 120102978 -133153605 + (TG)n Simple_repeat Simple_repeat 1 30 0 216 0 0 0 chr2 120102980 120103004 -133153579 + (TA)n Simple_repeat Simple_repeat 2 25 0 655 196 161 0 chr2 120103804 120103972 -133152611 + MER3 DNA MER1_type 1 195 -14 185 391 18 18 chr2 120104273 120104383 -133152200 - MIR SINE MIR -62 146 37 2203 204 66 57 chr2 120104385 120105036 -133151547 + L1MC3 LINE L1 7121 7777 -8 294 336 67 35 chr2 120105163 120105398 -133151185 - MIR SINE MIR 0 262 23 266 132 19 0 chr2 120105643 120105696 -133150887 + (CA)n Simple_repeat Simple_repeat 1 54 0 2334 88 3 0 chr2 120106252 120106549 -133150034 + AluSg SINE Alu 1 298 -12 43 0 0 0 chr2 120106950 120106993 -133149590 + AT_rich Low_complexity Low_complexity 1 43 0 1955 142 3 6 chr2 120107170 120107481 -133149102 - AluY SINE Alu -1 310 1 246 322 11 0 chr2 120107958 120108048 -133148535 + CT-rich Low_complexity Low_complexity 3 93 0 33 25 0 0 chr2 120108062 120108102 -133148481 + AT_rich Low_complexity Low_complexity 1 40 0 299 181 24 24 chr2 120108598 120108681 -133147902 - MER67D LTR ERV1 0 514 432 542 157 17 43 chr2 120108712 120108827 -133147756 - MER67D LTR ERV1 -402 112 1 648 294 63 13 chr2 120112629 120112867 -133143716 - MIR SINE MIR -5 257 8 433 347 63 17 chr2 120113830 120114009 -133142574 - MIR SINE MIR -48 214 30 392 233 217 8 chr2 120114223 120114352 -133142231 + MER5A DNA MER1_type 33 188 -1 3471 171 38 27 chr2 120114911 120115620 -133140963 + MER50 LTR ERV1 4 720 -14 2150 118 0 0 chr2 120116326 120116623 -133139960 - AluSq SINE Alu -16 297 1 354 23 0 0 chr2 120116895 120116938 -133139645 + (TTTTG)n Simple_repeat Simple_repeat 4 46 0 290 308 75 23 chr2 120117525 120117709 -133138874 - MIR SINE MIR -8 254 59 2219 186 21 5 chr2 120118408 120118827 -133137756 + MSTB LTR MaLR 1 426 0 1558 194 55 40 chr2 120118971 120119393 -133137190 - MSTC LTR MaLR 0 428 1 3253 196 46 42 chr2 120119692 120120556 -133136027 - L1MB8 LINE L1 -17 6161 5293 3657 161 36 7 chr2 120120567 120121270 -133135313 - L1MA4 LINE L1 -5 7357 6635 9501 214 102 17 chr2 120121291 120122315 -133134268 - L1MA4 LINE L1 -743 6465 5529 1839 138 53 0 chr2 120122315 120122598 -133133985 - AluSx SINE Alu -14 298 1 9501 214 102 17 chr2 120122598 120123532 -133133051 - L1MA4 LINE L1 -1679 5529 4675 944 133 26 0 chr2 120123532 120123683 -133132900 - L1PA10 LINE L1 0 6168 6014 9501 214 102 17 chr2 120123683 120126476 -133130107 - L1MA4 LINE L1 -2533 4675 1329 4902 240 55 44 chr2 120126514 120128278 -133128305 - L1MB8 LINE L1 -860 5286 3503 1379 372 30 8 chr2 120128288 120129014 -133127569 - L2 LINE L2 -628 2686 1945 1418 258 29 15 chr2 120129097 120129551 -133127032 - L1M4 LINE L1 -1989 4157 3698 234 238 36 24 chr2 120130229 120130313 -133126270 - L1MC/D LINE L1 -1911 5897 5813 621 319 114 19 chr2 120130366 120130796 -133125787 - L1M4 LINE L1 -1542 4604 4134 24 0 0 0 chr2 120131168 120131192 -133125391 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 120131228 120131249 -133125334 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr2 120131378 120131409 -133125174 + AT_rich Low_complexity Low_complexity 1 31 0 2795 227 31 30 chr2 120131605 120131787 -133124796 + Charlie1 DNA MER1_type 1399 1579 -1182 2067 116 3 3 chr2 120131787 120132089 -133124494 - AluSg SINE Alu -8 302 1 2795 227 31 30 chr2 120132089 120132686 -133123897 + Charlie1 DNA MER1_type 1579 2179 -582 1771 150 48 46 chr2 120132959 120133332 -133123251 - THE1C LTR MaLR 0 375 2 943 76 35 7 chr2 120133695 120133840 -133122743 - L1PA13 LINE L1 0 6163 6015 215 181 14 56 chr2 120134861 120134933 -133121650 + GA-rich Low_complexity Low_complexity 1 69 0 1012 126 0 0 chr2 120135471 120135622 -133120961 + L1PA7 LINE L1 6000 6150 -4 194 303 0 45 chr2 120137225 120137291 -133119292 + MIR3 SINE MIR 144 206 -2 587 349 52 64 chr2 120138225 120138614 -133117969 - MLT1K LTR MaLR -131 457 72 2241 112 3 0 chr2 120138614 120138926 -133117657 + AluSq SINE Alu 1 313 0 587 349 52 64 chr2 120138926 120138975 -133117608 - MLT1K LTR MaLR -516 72 24 26 0 0 0 chr2 120139529 120139555 -133117028 + AT_rich Low_complexity Low_complexity 1 26 0 457 293 0 0 chr2 120139555 120139661 -133116922 - MER21B LTR ERV1 -453 410 305 684 311 92 25 chr2 120140068 120140425 -133116158 + L2 LINE L2 2190 2570 -744 2023 129 0 16 chr2 120140588 120140898 -133115685 - AluSc SINE Alu -4 305 1 245 231 31 0 chr2 120141087 120141152 -133115431 + (TATG)n Simple_repeat Simple_repeat 1 67 0 2188 98 30 0 chr2 120142424 120142721 -133113862 + AluSc SINE Alu 1 306 -3 1420 160 58 22 chr2 120143677 120143952 -133112631 - AluJb SINE Alu -27 285 1 1108 53 0 0 chr2 120144291 120144461 -133112122 + L1PA8 LINE L1 6019 6188 0 361 139 38 0 chr2 120144855 120144934 -133111649 + CT-rich Low_complexity Low_complexity 3 84 0 1273 210 38 74 chr2 120145884 120146046 -133110537 + MLT1B LTR MaLR 14 180 -210 2017 157 0 0 chr2 120146046 120146352 -133110231 - AluSx SINE Alu -6 306 1 1273 210 38 74 chr2 120146352 120146580 -133110003 + MLT1B LTR MaLR 180 390 0 2045 281 88 37 chr2 120146980 120148074 -133108509 - L2 LINE L2 -8 3305 2142 870 293 57 35 chr2 120148945 120149314 -133107269 - L2 LINE L2 0 3313 2937 3179 196 81 15 chr2 120149886 120150555 -133106028 - L1MC3 LINE L1 -20 7765 7043 546 119 0 0 chr2 120150555 120150639 -133105944 + (TCTG)n Simple_repeat Simple_repeat 3 86 0 3179 196 81 15 chr2 120150639 120150694 -133105889 - L1MC3 LINE L1 -742 7043 6993 241 250 0 0 chr2 120151192 120151244 -133105339 + L1MC3 LINE L1 5445 5496 -2312 2014 123 7 3 chr2 120151403 120151695 -133104888 + AluSx SINE Alu 16 308 -4 194 0 0 37 chr2 120151972 120151999 -133104584 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 1894 127 0 34 chr2 120152002 120152293 -133104290 - AluSx SINE Alu -31 281 1 2829 224 11 33 chr2 120152542 120153247 -133103336 + L1MC3 LINE L1 7088 7777 -8 450 184 8 80 chr2 120153416 120153541 -133103042 + L1MC4a LINE L1 6443 6558 -1250 343 255 12 81 chr2 120153535 120153696 -133102887 + L1MC4 LINE L1 7505 7654 -388 * 234 0 0 0 chr2 120153821 120153847 -133102736 + (CA)n Simple_repeat Simple_repeat 2 27 0 221 171 0 0 chr2 120154029 120154070 -133102513 + T-rich Low_complexity Low_complexity 1 41 0 841 160 0 21 chr2 120154281 120154524 -133102059 + CT-rich Low_complexity Low_complexity 1 237 0 21 0 0 0 chr2 120154623 120154644 -133101939 + AT_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr2 120154853 120154880 -133101703 + AT_rich Low_complexity Low_complexity 1 27 0 488 258 8 0 chr2 120155757 120155881 -133100702 + L1MC1 LINE L1 2669 2793 -3353 28853 111 14 37 chr2 120155899 120162400 -133094183 - L1PA7 LINE L1 -4 6465 6 2992 261 38 26 chr2 120162408 120163626 -133092957 + L1MC1 LINE L1 2778 4009 -2137 2820 189 40 72 chr2 120163757 120164551 -133092032 + L1MC3 LINE L1 7009 7777 -8 2322 83 3 20 chr2 120165413 120165715 -133090868 + AluSp SINE Alu 4 300 -13 582 323 145 19 chr2 120165844 120166216 -133090367 - L2 LINE L2 -4 3309 2891 2253 108 0 13 chr2 120166348 120166662 -133089921 - AluSg SINE Alu 0 310 1 288 303 162 0 chr2 120166756 120166855 -133089728 + L1ME3A LINE L1 6029 6143 -27 275 302 9 19 chr2 120167577 120167683 -133088900 + CT-rich Low_complexity Low_complexity 4 108 0 1505 217 13 7 chr2 120169252 120169282 -133087301 - AluJo SINE Alu 0 438 410 642 26 0 0 chr2 120169282 120169358 -133087225 + (TTCC)n Simple_repeat Simple_repeat 1 76 0 1505 217 13 7 chr2 120169358 120169688 -133086895 - AluJo SINE Alu -28 410 1 25 0 0 0 chr2 120169929 120169954 -133086629 + AT_rich Low_complexity Low_complexity 1 25 0 256 276 43 52 chr2 120170171 120170287 -133086296 + MER89-int LTR ERV1 3614 3728 -3073 1217 241 20 55 chr2 120170352 120170696 -133085887 + MLT1B LTR MaLR 59 390 0 296 265 108 10 chr2 120170715 120170817 -133085766 + MER89-int LTR ERV1 6402 6513 -288 2328 89 0 13 chr2 120172911 120173224 -133083359 - AluSc SINE Alu 0 309 1 560 169 176 0 chr2 120173577 120173725 -133082858 - MER3 DNA MER1_type -19 190 17 1085 67 0 8 chr2 120173903 120174037 -133082546 + AluSq/x SINE Alu 1 133 -180 2383 62 0 20 chr2 120174041 120174346 -133082237 + AluY SINE Alu 1 299 -12 500 241 52 90 chr2 120174799 120175144 -133081439 + L1MC1 LINE L1 4485 4816 -1330 366 23 0 0 chr2 120175600 120175643 -133080940 + (TG)n Simple_repeat Simple_repeat 2 44 0 821 144 34 27 chr2 120175645 120175791 -133080792 - LTR40b LTR ERVL -9 453 307 1104 44 0 0 chr2 120175891 120176028 -133080555 + L1PA6 LINE L1 6011 6147 -7 5277 206 45 7 chr2 120176032 120177844 -133078739 + L1MC1 LINE L1 4379 6255 -78 1889 243 30 30 chr2 120177844 120178281 -133078302 - MLT2B3 LTR ERVL 0 554 118 1035 97 0 0 chr2 120178286 120178420 -133078163 - AluSp/q SINE Alu -13 300 167 814 184 8 127 chr2 120178934 120179178 -133077405 + MER20 DNA MER1_type 1 215 -4 274 250 68 0 chr2 120179326 120179414 -133077169 + L1ME3A LINE L1 5858 5951 -219 321 341 108 6 chr2 120180116 120180292 -133076291 + MIR SINE MIR 56 249 -13 846 130 8 0 chr2 120180607 120180730 -133075853 + FLAM_C SINE Alu 1 124 -19 2245 112 0 6 chr2 120180751 120181063 -133075520 + AluSg SINE Alu 1 310 0 4747 191 26 30 chr2 120181075 120182091 -133074492 + L1MC1 LINE L1 5314 6325 -8 551 261 40 17 chr2 120182760 120182936 -133073647 + LTR41 LTR ERVL 11 190 -583 2962 123 51 6 chr2 120183172 120183660 -133072923 + MER9 LTR ERVK 2 511 0 229 262 48 0 chr2 120183778 120183862 -133072721 + LTR50 LTR ERVL 705 792 -3 1912 123 15 0 chr2 120184015 120184284 -133072299 - AluSx SINE Alu -18 294 22 1869 131 21 3 chr2 120185125 120185415 -133071168 + AluY SINE Alu 1 295 -16 522 289 104 41 chr2 120186538 120187041 -133069542 + L1MC4a LINE L1 5406 5591 -651 3650 187 14 25 chr2 120187483 120188193 -133068390 - MER4D LTR ERV1 0 903 202 2593 189 16 86 chr2 120188211 120188767 -133067816 - LTR9 LTR ERV1 -13 599 92 2293 93 7 3 chr2 120188767 120189077 -133067506 - AluSp SINE Alu 0 313 3 2593 189 16 86 chr2 120189077 120189162 -133067421 - LTR9 LTR ERV1 -520 92 3 1046 178 15 15 chr2 120189166 120189363 -133067220 - MER49 LTR ERV1 -726 197 1 805 219 19 48 chr2 120189371 120189581 -133067002 + MIR SINE MIR 59 262 0 1896 198 97 63 chr2 120190342 120190681 -133065902 - MER92B LTR ERV1 -9 627 256 2356 200 46 13 chr2 120190681 120191222 -133065361 - MER89 LTR ERV1 0 559 1 1896 198 97 63 chr2 120191222 120191488 -133065095 - MER92B LTR ERV1 -380 256 1 214 165 33 55 chr2 120191580 120191671 -133064912 + (TA)n Simple_repeat Simple_repeat 2 90 0 247 121 55 44 chr2 120191718 120191809 -133064774 + (TA)n Simple_repeat Simple_repeat 1 92 0 2565 86 5 19 chr2 120191829 120192203 -133064380 - L1PB1 LINE L1 -1 6150 5782 555 162 0 0 chr2 120192210 120192309 -133064274 + (CA)n Simple_repeat Simple_repeat 2 100 0 2141 121 3 3 chr2 120192325 120192623 -133063960 - AluSq SINE Alu -15 298 1 857 98 0 0 chr2 120192629 120192741 -133063842 - AluSg/x SINE Alu -17 295 184 5192 176 33 34 chr2 120192741 120193962 -133062621 - L1PB1 LINE L1 -364 5787 4575 2625 96 3 0 chr2 120193962 120194316 -133062267 + THE1A LTR MaLR 1 355 0 5192 176 33 34 chr2 120194316 120194875 -133061708 - L1PB1 LINE L1 -1576 4575 4017 5435 170 23 22 chr2 120194882 120195944 -133060639 - L1MC1 LINE L1 -17 6596 5534 550 172 198 72 chr2 120195946 120196237 -133060346 + MSTD LTR MaLR 1 396 0 1848 258 22 4 chr2 120196379 120196933 -133059650 - L1MC1 LINE L1 -1221 5205 4642 306 134 0 65 chr2 120197034 120197108 -133059475 - Alu SINE Alu -2 300 243 2862 255 24 20 chr2 120197112 120197683 -133058900 - L1MC1 LINE L1 -2962 3464 2884 1334 202 26 80 chr2 120197683 120198069 -133058514 - MLT1A1 LTR MaLR 0 365 1 2862 255 24 20 chr2 120198069 120198588 -133057995 - L1MC1 LINE L1 -3542 2884 2369 4891 195 36 72 chr2 120198666 120199071 -133057512 - L1MC1 LINE L1 -5138 1288 870 182 62 31 0 chr2 120199071 120199103 -133057480 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 4891 195 36 72 chr2 120199103 120200004 -133056579 - L1MC1 LINE L1 -5556 870 29 387 0 0 0 chr2 120200067 120200110 -133056473 + (TG)n Simple_repeat Simple_repeat 2 44 0 2191 113 3 0 chr2 120200919 120201219 -133055364 + AluSq SINE Alu 1 301 -12 209 203 47 0 chr2 120201407 120201471 -133055112 + (TA)n Simple_repeat Simple_repeat 2 68 0 730 294 102 53 chr2 120202048 120202460 -133054123 + LTR16C LTR ERVL 42 473 -18 198 0 0 0 chr2 120203538 120203560 -133053023 + (TTA)n Simple_repeat Simple_repeat 3 24 0 7542 20 14 0 chr2 120203560 120204582 -133052001 - L1PA4 LINE L1 -18 6137 5118 999 201 13 27 chr2 120205401 120205620 -133050963 - MER31A LTR ERV1 0 485 270 1611 182 27 0 chr2 120205620 120205917 -133050666 - MER84 LTR ERVI -2 505 201 872 211 6 0 chr2 120206764 120206925 -133049658 + FAM SINE Alu 1 162 -13 45 19 0 0 chr2 120211456 120211508 -133045075 + AT_rich Low_complexity Low_complexity 1 52 0 2026 139 33 14 chr2 120211867 120212235 -133044348 + THE1C LTR MaLR 1 375 0 858 249 97 61 chr2 120212765 120213126 -133043457 - MLT1A2 LTR MaLR 0 374 1 240 211 39 0 chr2 120213320 120213372 -133043211 - L2 LINE L2 0 3272 3219 274 349 102 12 chr2 120213406 120213572 -133043011 + MIR SINE MIR 46 226 -36 242 243 14 14 chr2 120215261 120215335 -133041248 - MLT1K LTR MaLR -4 584 511 4792 101 8 1 chr2 120215445 120216147 -133040436 - L1P LINE L1 -773 5373 4667 727 82 0 0 chr2 120216163 120216261 -133040322 + L1PA8 LINE L1 5665 5762 -392 995 132 6 0 chr2 120216363 120216522 -133040061 + L1PA8 LINE L1 5740 5899 -273 5045 89 8 1 chr2 120216523 120217229 -133039354 - L1P LINE L1 -1478 4668 3958 4341 65 3 3 chr2 120217229 120217797 -133038786 + L1PA7 LINE L1 5583 6151 -3 991 202 6 0 chr2 120217962 120218135 -133038448 - AluSg/x SINE Alu -8 302 129 452 286 54 39 chr2 120218692 120218895 -133037688 - MIR SINE MIR -10 252 47 4684 177 23 46 chr2 120219610 120221140 -133035443 - L1MA4 LINE L1 -3 6297 4810 10025 221 25 10 chr2 120221147 120223186 -133033397 + ERVL-C1 LTR ERVL 2299 4368 -1396 1963 143 3 26 chr2 120223256 120223564 -133033019 - AluSg SINE Alu -9 301 1 8695 117 12 12 chr2 120223604 120224818 -133031765 - HSMAR1 DNA Mariner 0 1287 71 2381 75 0 3 chr2 120224818 120225125 -133031458 - AluY SINE Alu -5 306 1 8695 117 12 12 chr2 120225125 120225166 -133031417 - HSMAR1 DNA Mariner -1215 72 32 36243 96 16 10 chr2 120225278 120230921 -133025662 - L1P2 LINE L1 -470 5684 11 1093 249 40 45 chr2 120230961 120231358 -133025225 - L1M4 LINE L1 -1789 4357 3963 3050 228 108 14 chr2 120231362 120231754 -133024829 + ERVL-C1 LTR ERVL 4841 5195 -569 195 42 0 0 chr2 120231754 120231778 -133024805 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3050 228 108 14 chr2 120231778 120232217 -133024366 + ERVL-C1 LTR ERVL 5195 5750 -14 245 241 17 0 chr2 120232222 120232280 -133024303 + MLT2C1 LTR ERVL 1 59 -405 471 163 0 0 chr2 120232287 120232367 -133024216 + MADE1 DNA Mariner 1 80 0 1056 227 52 16 chr2 120232373 120232624 -133023959 + MLT2C1 LTR ERVL 71 330 -67 206 333 0 0 chr2 120232647 120232716 -133023867 + (CA)n Simple_repeat Simple_repeat 2 70 0 2435 263 33 63 chr2 120232724 120233178 -133023405 - L1MDb LINE L1 -1804 4602 4136 1679 154 33 0 chr2 120233178 120233451 -133023132 - AluSx SINE Alu -30 282 1 2435 263 33 63 chr2 120233451 120234356 -133022227 - L1MDb LINE L1 -2270 4136 3284 4187 196 36 27 chr2 120234419 120234757 -133021826 - L1MA9 LINE L1 -40 6988 6655 2280 152 83 2 chr2 120234757 120235153 -133021430 - MSTA LTR MaLR 0 428 1 4187 196 36 27 chr2 120235153 120235999 -133020584 - L1MA9 LINE L1 -373 6655 5786 1482 199 23 19 chr2 120235999 120236306 -133020277 + AluJb SINE Alu 1 308 -4 4187 196 36 27 chr2 120236306 120236847 -133019736 - L1MA9 LINE L1 -1242 5786 5252 4280 240 96 27 chr2 120236875 120237552 -133019031 - L1MDb LINE L1 -3243 3163 2534 1766 143 54 51 chr2 120237552 120237888 -133018695 - MER1B DNA MER1_type 0 337 1 4280 240 96 27 chr2 120237888 120239352 -133017231 - L1MDb LINE L1 -3872 2534 744 423 0 0 0 chr2 120239352 120239399 -133017184 + (TG)n Simple_repeat Simple_repeat 2 48 0 4280 240 96 27 chr2 120239399 120240189 -133016394 - L1MDb LINE L1 -5662 744 10 202 267 17 17 chr2 120241223 120241283 -133015300 + GA-rich Low_complexity Low_complexity 6 65 0 556 291 106 4 chr2 120241552 120241827 -133014756 - LTR33A LTR ERVL -8 515 213 304 137 0 0 chr2 120243399 120243450 -133013133 - L1PB3 LINE L1 -5 6149 6099 * 8115 198 19 15 chr2 120243448 120245439 -133011144 - L1P5 LINE L1 -425 5729 3729 186 71 0 0 chr2 120245439 120245467 -133011116 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 8115 198 19 15 chr2 120245467 120245852 -133010731 - L1P5 LINE L1 -2425 3729 3347 6330 221 58 33 chr2 120245959 120250817 -133005766 - L1MA9 LINE L1 -2261 4601 551 4078 46 4 2 chr2 120250817 120251320 -133005263 - L1PA4 LINE L1 0 6155 5652 6330 221 58 33 chr2 120251320 120251874 -133004709 - L1MA9 LINE L1 -6311 551 12 485 262 101 6 chr2 120251973 120252145 -133004438 - MLT1A2 LTR MaLR -2 465 201 563 269 66 22 chr2 120252200 120252382 -133004201 - MLT1A2 LTR MaLR -184 190 1 233 347 93 27 chr2 120252481 120252631 -133003952 + L2 LINE L2 2879 3038 -275 4174 128 58 73 chr2 120254417 120255295 -133001288 - L1MA2 LINE L1 0 7723 6859 5803 173 19 4 chr2 120255489 120256630 -132999953 - L1MA2 LINE L1 -1235 6330 5173 2962 224 29 3 chr2 120256627 120257360 -132999223 - L1MA2 LINE L1 -3067 4498 3747 * 2062 193 70 0 chr2 120257360 120257760 -132998823 + MSTA LTR MaLR 1 428 0 8098 181 14 67 chr2 120257760 120258108 -132998475 + MSTA-int LTR MaLR 1 366 -1285 3996 38 0 0 chr2 120258108 120258585 -132997998 + L1PA5 LINE L1 5665 6141 -13 8098 181 14 67 chr2 120258585 120259765 -132996818 + MSTA-int LTR MaLR 366 1428 -223 5097 71 7 0 chr2 120259765 120260439 -132996144 - L1PA6 LINE L1 0 6154 5476 8098 181 14 67 chr2 120260439 120260652 -132995931 + MSTA-int LTR MaLR 1428 1651 0 1862 193 73 18 chr2 120260659 120261058 -132995525 + MSTA LTR MaLR 8 428 0 10769 136 17 17 chr2 120261058 120261469 -132995114 - L1MA2 LINE L1 -3814 3751 3342 2666 84 22 3 chr2 120261469 120261840 -132994743 - L1PA8A LINE L1 -4 6127 5750 10769 136 17 17 chr2 120261840 120263454 -132993129 - L1MA2 LINE L1 -4223 3342 1725 1319 158 31 12 chr2 120263434 120263682 -132992901 + AluJb SINE Alu 81 312 0 * 313 238 33 156 chr2 120263683 120263719 -132992864 + MER5A DNA MER1_type 61 100 -89 1088 195 121 85 chr2 120263719 120264166 -132992417 - MLT1C LTR MaLR 0 467 5 313 238 33 156 chr2 120264166 120264251 -132992332 + MER5A DNA MER1_type 100 167 -22 293 115 0 19 chr2 120265168 120265220 -132991363 + (GGGA)n Simple_repeat Simple_repeat 1 51 0 478 295 77 90 chr2 120265220 120266000 -132990583 + L1 LINE L1 3075 3844 -2302 5540 120 8 26 chr2 120266115 120266794 -132989789 - L1PA14 LINE L1 -3 6158 5468 1583 203 3 3 chr2 120266794 120267085 -132989498 - AluJb SINE Alu -14 298 8 5540 120 8 26 chr2 120267085 120267185 -132989398 - L1PA14 LINE L1 -693 5468 5394 1973 127 0 0 chr2 120267185 120267452 -132989131 - AluSg SINE Alu -14 296 30 5540 120 8 26 chr2 120267452 120267557 -132989026 - L1PA14 LINE L1 -767 5394 5289 388 200 0 0 chr2 120267582 120267662 -132988921 - MADE1 DNA Mariner 0 80 1 771 276 64 48 chr2 120267699 120267985 -132988598 - LTR38 LTR ERV1 -22 534 237 2438 94 0 0 chr2 120267985 120268294 -132988289 - AluSc SINE Alu 0 309 1 771 276 64 48 chr2 120268294 120268446 -132988137 - LTR38 LTR ERV1 -319 237 89 221 200 0 22 chr2 120268481 120268526 -132988057 + A-rich Low_complexity Low_complexity 2 45 0 22 35 0 0 chr2 120268899 120268928 -132987655 + AT_rich Low_complexity Low_complexity 1 29 0 560 201 117 109 chr2 120268959 120269307 -132987276 - MLT1H LTR MaLR -5 590 73 23 0 0 0 chr2 120269314 120269337 -132987246 + AT_rich Low_complexity Low_complexity 1 23 0 228 178 0 55 chr2 120269507 120269580 -132987003 + A-rich Low_complexity Low_complexity 6 74 0 2195 91 3 11 chr2 120269590 120269916 -132986667 + AluSx SINE Alu 1 324 0 1158 199 57 71 chr2 120270554 120270851 -132985732 + AluJb SINE Alu 2 294 -8 418 344 80 5 chr2 120270882 120271094 -132985489 - MLT1K LTR MaLR -165 423 196 273 309 114 29 chr2 120271321 120271496 -132985087 + MIR SINE MIR 1 190 -72 1292 258 109 16 chr2 120272178 120272620 -132983963 + MER110 LTR ERV1 2 484 -7 378 0 0 0 chr2 120272946 120272988 -132983595 + (TCTA)n Simple_repeat Simple_repeat 4 45 0 547 262 61 12 chr2 120273354 120273518 -132983065 + MER5B DNA MER1_type 4 175 -3 479 209 11 0 chr2 120273574 120273665 -132982918 - MER5A DNA MER1_type -83 106 15 504 228 16 16 chr2 120273689 120273816 -132982767 + MER5A DNA MER1_type 1 127 -62 223 358 58 25 chr2 120273985 120274105 -132982478 + MIR SINE MIR 18 141 -67 4496 79 7 10 chr2 120275374 120275985 -132980598 + L1PA8 LINE L1 5564 6172 0 180 0 0 0 chr2 120277198 120277218 -132979365 + (ATTG)n Simple_repeat Simple_repeat 4 23 0 1928 137 11 0 chr2 120277218 120277495 -132979088 - AluSx SINE Alu -32 280 1 907 143 0 0 chr2 120277503 120277636 -132978947 - AluSq/x SINE Alu -179 133 1 250 287 163 31 chr2 120279080 120279209 -132977374 + L2 LINE L2 3158 3303 -10 2643 39 0 0 chr2 120279235 120279546 -132977037 - AluY SINE Alu 0 311 1 1570 219 81 18 chr2 120279571 120280014 -132976569 - L1MD3 LINE L1 -29 7966 7496 809 326 104 15 chr2 120280036 120280624 -132975959 - L1MCc LINE L1 -4963 1460 821 267 361 58 7 chr2 120283263 120283418 -132973165 + MIR3 SINE MIR 19 181 -27 24 32 0 0 chr2 120283929 120283960 -132972623 + AT_rich Low_complexity Low_complexity 1 31 0 904 300 101 28 chr2 120284219 120284765 -132971818 - L1ME3A LINE L1 -52 6118 5533 28 0 0 0 chr2 120284798 120284826 -132971757 + AT_rich Low_complexity Low_complexity 1 28 0 357 306 146 36 chr2 120284941 120285242 -132971341 - L1M4 LINE L1 -5301 1241 1039 268 224 0 24 chr2 120285376 120285461 -132971122 + CT-rich Low_complexity Low_complexity 3 85 0 2099 123 13 3 chr2 120285461 120285770 -132970813 - AluSx SINE Alu 0 312 1 918 235 166 22 chr2 120288827 120289146 -132967437 + MLT1A1 LTR MaLR 1 365 0 22 0 0 0 chr2 120289653 120289675 -132966908 + AT_rich Low_complexity Low_complexity 1 22 0 413 0 39 0 chr2 120289983 120290035 -132966548 + (TTTA)n Simple_repeat Simple_repeat 4 57 0 2305 74 0 0 chr2 120290040 120290324 -132966259 - AluY SINE Alu -27 284 1 279 227 0 0 chr2 120290325 120290391 -132966192 + (TA)n Simple_repeat Simple_repeat 2 67 0 259 324 32 82 chr2 120291146 120291427 -132965156 - L2 LINE L2 -179 3093 2827 353 337 123 0 chr2 120292345 120292532 -132964051 + L1MEc LINE L1 36 245 -6151 3013 73 0 0 chr2 120292587 120292969 -132963614 + LTR8 LTR ERV1 203 584 -107 355 145 0 26 chr2 120292971 120293047 -132963536 + (GGAA)n Simple_repeat Simple_repeat 4 77 0 434 271 8 8 chr2 120293108 120293226 -132963357 + L1MEc LINE L1 390 507 -5889 272 0 0 77 chr2 120293230 120293282 -132963301 + (TTC)n Simple_repeat Simple_repeat 1 48 0 297 0 0 0 chr2 120293282 120293315 -132963268 + (TTA)n Simple_repeat Simple_repeat 2 34 0 2732 177 35 11 chr2 120293315 120293862 -132962721 - L1MB5 LINE L1 -11 6163 5604 1780 156 10 3 chr2 120293865 120294166 -132962417 - AluY SINE Alu -2 309 7 812 260 25 32 chr2 120294177 120294458 -132962125 - AluJo SINE Alu -12 300 22 297 0 0 0 chr2 120294564 120294597 -132961986 + (TTA)n Simple_repeat Simple_repeat 2 34 0 3007 184 30 34 chr2 120294597 120295151 -132961432 - L1MB5 LINE L1 -11 6163 5608 2434 57 10 0 chr2 120295151 120295447 -132961136 - AluY SINE Alu -6 305 7 1747 174 7 19 chr2 120295452 120295762 -132960821 - AluJo SINE Alu -6 306 1 3007 184 30 34 chr2 120295762 120295871 -132960712 - L1MB5 LINE L1 -570 5604 5497 661 146 0 15 chr2 120295873 120296003 -132960580 + (TTCC)n Simple_repeat Simple_repeat 2 129 0 1836 120 14 4 chr2 120296052 120296328 -132960255 - AluSc SINE Alu -1 308 30 1414 226 49 7 chr2 120296328 120296812 -132959771 - L1MB5 LINE L1 -688 5486 4977 1301 261 106 12 chr2 120296852 120297426 -132959157 + L1MEc LINE L1 537 1164 -5232 2385 263 93 31 chr2 120297455 120298180 -132958403 - L1M4 LINE L1 -1034 5112 4277 1442 204 90 49 chr2 120298180 120298646 -132957937 + MER31A LTR ERV1 1 485 0 2385 263 93 31 chr2 120298646 120299151 -132957432 - L1M4 LINE L1 -1869 4277 3805 2161 117 0 3 chr2 120299257 120299547 -132957036 + AluSg SINE Alu 1 289 -21 1896 176 0 0 chr2 120299781 120300093 -132956490 - AluSx SINE Alu 0 312 1 22 0 0 0 chr2 120300349 120300371 -132956212 + AT_rich Low_complexity Low_complexity 1 22 0 277 348 22 11 chr2 120300392 120300484 -132956099 - MIR SINE MIR -153 109 17 1874 188 127 0 chr2 120300498 120300907 -132955676 - LTR54B LTR ERV1 -21 477 17 489 208 47 0 chr2 120301331 120301437 -132955146 - MER5A DNA MER1_type 0 189 79 21884 32 5 0 chr2 120301440 120304866 -132951717 + L1PA4 LINE L1 2716 6152 -3 447 92 0 0 chr2 120305022 120305087 -132951496 + (CTG)n Simple_repeat Simple_repeat 1 65 0 291 345 47 23 chr2 120305144 120305315 -132951268 + MIR3 SINE MIR 27 201 -7 22 35 0 0 chr2 120305386 120305415 -132951168 + AT_rich Low_complexity Low_complexity 1 29 0 245 323 95 38 chr2 120305502 120305660 -132950923 - MER5A DNA MER1_type -5 184 18 344 384 7 0 chr2 120305852 120305998 -132950585 + MIR3 SINE MIR 43 189 -19 181 368 0 0 chr2 120307032 120307100 -132949483 - MIR SINE MIR -109 153 86 213 311 38 30 chr2 120308070 120308202 -132948381 + L2 LINE L2 2674 2806 -508 791 272 5 18 chr2 120308573 120308797 -132947786 + MER58A DNA MER1_type 1 221 -3 23 0 0 0 chr2 120309069 120309092 -132947491 + AT_rich Low_complexity Low_complexity 1 23 0 289 352 23 17 chr2 120309264 120309440 -132947143 - L2 LINE L2 -450 2864 2688 24 67 0 0 chr2 120309554 120309599 -132946984 + AT_rich Low_complexity Low_complexity 1 45 0 4754 129 1 20 chr2 120309903 120310662 -132945921 + L1PA15 LINE L1 4024 4768 -1378 207 0 0 0 chr2 120310792 120310815 -132945768 + (CA)n Simple_repeat Simple_repeat 1 23 0 414 236 75 70 chr2 120310835 120311034 -132945549 + L2 LINE L2 3109 3308 -5 22 0 0 0 chr2 120311380 120311402 -132945181 + AT_rich Low_complexity Low_complexity 1 22 0 3004 186 30 39 chr2 120312084 120312807 -132943776 + L1M LINE L1 4700 5420 -744 3268 136 0 4 chr2 120312809 120313331 -132943252 + L1PA15 LINE L1 5646 6165 0 430 292 103 71 chr2 120313378 120313785 -132942798 - L1ME4a LINE L1 -254 5867 5448 490 321 107 5 chr2 120314487 120314711 -132941872 + MIR SINE MIR 11 257 -5 22 35 0 0 chr2 120314759 120314788 -132941795 + AT_rich Low_complexity Low_complexity 1 29 0 2359 153 20 0 chr2 120314985 120315391 -132941192 - L1PA13 LINE L1 -6 6157 5744 335 253 0 40 chr2 120315491 120315590 -132940993 + L1MC4 LINE L1 6609 6703 -1339 270 116 0 0 chr2 120315593 120315636 -132940947 + (TA)n Simple_repeat Simple_repeat 2 44 0 1955 138 3 16 chr2 120315638 120315943 -132940640 - AluSx SINE Alu -11 301 1 193 337 11 22 chr2 120316206 120316295 -132940288 - MIR3 SINE MIR -12 196 109 536 216 0 27 chr2 120316782 120316893 -132939690 + AluSq/x SINE Alu 1 108 -205 219 191 0 0 chr2 120316904 120316972 -132939611 + CT-rich Low_complexity Low_complexity 1 68 0 357 290 65 35 chr2 120317399 120317630 -132938953 - MER112 DNA MER1_type 0 260 23 2181 94 7 3 chr2 120317670 120317958 -132938625 - AluSq SINE Alu -24 289 1 675 91 218 0 chr2 120317958 120318068 -132938515 - AluSc SINE Alu -175 134 1 333 261 176 11 chr2 120318142 120318318 -132938265 - LTR50 LTR ERVL -298 497 293 964 119 0 8 chr2 120318585 120318719 -132937864 + AluSx SINE Alu 1 133 -180 1172 53 0 13 chr2 120318722 120318874 -132937709 + L1PA5 LINE L1 5999 6148 -6 1334 86 11 16 chr2 120318898 120319084 -132937499 + AluSx SINE Alu 121 305 -7 3176 84 9 9 chr2 120320115 120320565 -132936018 - LTR7 LTR ERV1 0 450 1 1789 111 8 0 chr2 120320722 120320983 -132935600 - L1P LINE L1 -1688 4458 4196 679 275 178 34 chr2 120321797 120322618 -132933965 - HAL1 LINE L1 -865 1642 704 1625 208 62 6 chr2 120323187 120323524 -132933059 - MLT1A1 LTR MaLR 0 365 10 22 0 0 0 chr2 120324066 120324088 -132932495 + AT_rich Low_complexity Low_complexity 1 22 0 2716 198 32 6 chr2 120324282 120324813 -132931770 - MER44D DNA MER2_type 0 605 6 1943 116 7 0 chr2 120324832 120325107 -132931476 + AluSq SINE Alu 30 306 -7 2016 132 14 0 chr2 120325260 120325548 -132931035 - AluSx SINE Alu -20 292 1 269 276 13 13 chr2 120325574 120325650 -132930933 + MIR3 SINE MIR 85 160 -48 182 320 0 0 chr2 120327814 120327864 -132928719 - L3 LINE CR1 -1379 198 149 1213 220 93 19 chr2 120327986 120328309 -132928274 - MLT1C LTR MaLR 0 467 121 1511 282 15 12 chr2 120328619 120329023 -132927560 - L1M4b LINE L1 -6452 407 3 2043 66 92 4 chr2 120329430 120329702 -132926881 + AluY SINE Alu 1 296 -15 21 0 0 0 chr2 120330306 120330327 -132926256 + AT_rich Low_complexity Low_complexity 1 21 0 282 284 26 17 chr2 120331167 120331283 -132925300 - HAL1 LINE L1 -887 1620 1504 5278 90 14 14 chr2 120331395 120332161 -132924422 - MER4E LTR ERV1 0 766 1 289 273 58 36 chr2 120332190 120332329 -132924254 - HAL1 LINE L1 -1067 1440 1299 21 0 0 0 chr2 120332690 120332711 -132923872 + AT_rich Low_complexity Low_complexity 1 21 0 240 250 0 0 chr2 120332744 120332804 -132923779 + MLT1I LTR MaLR 7 66 -343 185 362 153 53 chr2 120334718 120335135 -132921448 + L2 LINE L2 2812 3270 -2 22 35 0 0 chr2 120335223 120335252 -132921331 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 120335489 120335511 -132921072 + AT_rich Low_complexity Low_complexity 1 22 0 1809 174 124 16 chr2 120335647 120336033 -132920550 - MSTA LTR MaLR 0 428 1 1674 138 3 14 chr2 120336033 120336315 -132920268 - MSTA-int LTR MaLR 0 1580 1302 2197 125 20 8 chr2 120336315 120336666 -132919917 + THE1A LTR MaLR 1 355 0 11063 102 6 22 chr2 120336668 120337053 -132919530 + THE1A-int LTR MaLR 3 392 -1188 25610 28 2 0 chr2 120337053 120340911 -132915672 - L1PA3 LINE L1 0 6155 2291 11063 102 6 22 chr2 120340911 120342128 -132914455 + THE1A-int LTR MaLR 392 1580 0 2155 135 14 14 chr2 120342128 120342483 -132914100 + THE1A LTR MaLR 1 355 0 6958 173 12 44 chr2 120342483 120343827 -132912756 - MSTA-int LTR MaLR -276 1304 3 1345 156 114 70 chr2 120343829 120344188 -132912395 - THE1C LTR MaLR 0 375 1 411 21 0 0 chr2 120344215 120344263 -132912320 + (CA)n Simple_repeat Simple_repeat 1 48 0 232 316 60 17 chr2 120344379 120344496 -132912087 + MIR SINE MIR 71 192 -70 354 342 91 16 chr2 120345755 120345942 -132910641 - L3b LINE CR1 -8 1575 1375 258 212 71 0 chr2 120346721 120346820 -132909763 + L1ME4a LINE L1 6016 6121 0 1384 261 122 2 chr2 120346845 120347278 -132909305 + MER90 LTR ERV1 1 485 -90 413 233 88 6 chr2 120347612 120347771 -132908812 - MER20B DNA MER1_type -62 721 550 801 317 32 32 chr2 120347938 120348380 -132908203 - MER20B DNA MER1_type -308 475 34 1567 246 27 19 chr2 120348457 120348933 -132907650 + L1MD3 LINE L1 7515 7994 -1 876 130 61 0 chr2 120348938 120349069 -132907514 + AluSg/x SINE Alu 150 288 -24 292 271 0 47 chr2 120349512 120349619 -132906964 - L1ME LINE L1 -481 5640 5539 2057 132 10 3 chr2 120350130 120350440 -132906143 - AluSx SINE Alu 0 312 1 331 400 68 39 chr2 120351376 120351686 -132904897 - L2 LINE L2 -22 3250 2932 1674 114 23 171 chr2 120351835 120352186 -132904397 - L1PB4 LINE L1 -1 6155 5890 1906 161 0 0 chr2 120352186 120352478 -132904105 + AluSx SINE Alu 2 293 -19 1674 114 23 171 chr2 120352478 120352600 -132903983 - L1PB4 LINE L1 -266 5890 5752 229 365 50 25 chr2 120352600 120352759 -132903824 - MIR SINE MIR -98 164 2 23 0 0 0 chr2 120353063 120353086 -132903497 + AT_rich Low_complexity Low_complexity 1 23 0 2742 253 9 5 chr2 120353531 120354168 -132902415 - MER82 DNA MER2_type -6 647 8 222 37 0 0 chr2 120354175 120354202 -132902381 + (TC)n Simple_repeat Simple_repeat 2 28 0 271 250 0 22 chr2 120354228 120354320 -132902263 + L1MC4 LINE L1 6614 6703 -1339 474 235 20 0 chr2 120354343 120354445 -132902138 + MER82 DNA MER2_type 71 174 -479 201 74 0 0 chr2 120354447 120354474 -132902109 + (TA)n Simple_repeat Simple_repeat 2 28 0 6325 97 10 1 chr2 120354674 120355598 -132900985 + L1PA7 LINE L1 4472 5403 -743 3017 79 9 2 chr2 120355593 120356026 -132900557 + L1PA7 LINE L1 5633 6069 -85 * 305 268 52 88 chr2 120356318 120356512 -132900071 + MIR SINE MIR 53 239 -23 340 271 33 40 chr2 120356649 120356800 -132899783 - MIR SINE MIR -96 166 17 325 43 22 0 chr2 120358045 120358091 -132898492 + MADE1 DNA Mariner 1 47 -33 337 58 39 0 chr2 120358126 120358178 -132898405 - MADE1 DNA Mariner -26 54 1 556 351 52 0 chr2 120358314 120358565 -132898018 - ERVL LTR ERVL -739 5025 4762 603 325 48 6 chr2 120358634 120359362 -132897221 - ERVL LTR ERVL -852 4633 3849 225 221 88 15 chr2 120359548 120359616 -132896967 - LTR16A LTR ERVL -377 73 1 365 206 10 39 chr2 120359943 120360045 -132896538 + LTR67 LTR ERVL 457 555 -2 247 150 0 0 chr2 120360163 120360203 -132896380 - MER91 DNA MER1_type -17 173 134 2734 188 94 3 chr2 120361856 120362432 -132894151 - MER73 LTR ERVL -1 643 16 7017 197 139 100 chr2 120362448 120365876 -132890707 + L1MA4A LINE L1 13 3577 -3271 * 7652 169 56 37 chr2 120365875 120367295 -132889288 + L1MA4A LINE L1 4013 5405 -1600 2074 112 30 0 chr2 120367295 120367423 -132889160 + AluY SINE Alu 1 124 -187 273 29 0 0 chr2 120367423 120367457 -132889126 + (CAA)n Simple_repeat Simple_repeat 2 35 0 2074 112 30 0 chr2 120367457 120367623 -132888960 + AluY SINE Alu 124 304 -7 7652 169 56 37 chr2 120367623 120368014 -132888569 + L1MA4A LINE L1 5405 5787 -1218 2620 10 16 7 chr2 120368014 120368322 -132888261 + AluYa5 SINE Alu 1 311 0 7652 169 56 37 chr2 120368322 120369423 -132887160 + L1MA4A LINE L1 5787 7004 -1 1458 194 86 43 chr2 120370080 120370476 -132886107 + LTR52 LTR ERVL 1 413 -8 2159 62 4 0 chr2 120370869 120371143 -132885440 - AluY SINE Alu -8 303 29 255 365 45 20 chr2 120371523 120371723 -132884860 + MLT1K LTR MaLR 204 408 -180 303 349 169 26 chr2 120372046 120372502 -132884081 + L2 LINE L2 2269 2789 -525 220 319 97 28 chr2 120372809 120372953 -132883630 + L2 LINE L2 3160 3313 0 1805 196 14 8 chr2 120373236 120373599 -132882984 - MLT1A1 LTR MaLR 0 365 1 562 224 130 73 chr2 120375376 120375622 -132880961 + MLT1C LTR MaLR 10 269 -198 415 245 25 82 chr2 120375614 120375773 -132880810 + MER21B LTR ERV1 562 711 -152 * 481 238 48 0 chr2 120375768 120375873 -132880710 + MER21B LTR ERV1 645 754 -109 2450 232 33 103 chr2 120375901 120376723 -132879860 + MLT1C-int LTR MaLR 607 1370 -1 1158 240 77 43 chr2 120376729 120377168 -132879415 + MLT1C LTR MaLR 6 453 -14 26 0 0 0 chr2 120377795 120377821 -132878762 + AT_rich Low_complexity Low_complexity 1 26 0 315 0 0 0 chr2 120377886 120377921 -132878662 + (CA)n Simple_repeat Simple_repeat 2 36 0 1609 190 3 18 chr2 120378921 120379205 -132877378 + AluJo SINE Alu 1 280 -32 1257 220 131 11 chr2 120379402 120379752 -132876831 + MSTD LTR MaLR 5 396 0 779 196 103 36 chr2 120380048 120380272 -132876311 + MLT2B1 LTR ERVL 1 239 -175 3320 125 9 7 chr2 120380447 120380990 -132875593 + L1PA10 LINE L1 4827 5370 -776 1274 96 74 135 chr2 120380987 120381295 -132875288 + L1PA10 LINE L1 5876 6157 -9 * 425 303 58 13 chr2 120381474 120381629 -132874954 + MIR SINE MIR 3 164 -98 2080 127 0 0 chr2 120382030 120382337 -132874246 + AluSx SINE Alu 1 307 0 1966 118 4 0 chr2 120382741 120383059 -132873524 - AluSg SINE Alu 0 319 1 248 315 9 9 chr2 120383334 120383442 -132873141 - MER33 DNA MER1_type -211 113 6 313 306 126 16 chr2 120384173 120384356 -132872227 + MIR SINE MIR 1 203 -59 371 192 173 6 chr2 120385043 120385199 -132871384 - MER5C DNA MER1_type -9 315 134 22 35 0 0 chr2 120385642 120385671 -132870912 + AT_rich Low_complexity Low_complexity 1 29 0 5620 128 12 9 chr2 120385883 120386785 -132869798 - L1PA14 LINE L1 -1 6160 5257 3969 122 21 11 chr2 120386785 120387343 -132869240 + L1MA3 LINE L1 5636 6213 -92 2338 90 3 0 chr2 120387343 120387643 -132868940 - AluSq SINE Alu -12 301 1 3969 122 21 11 chr2 120387643 120387737 -132868846 + L1MA3 LINE L1 6213 6305 0 5620 128 12 9 chr2 120387737 120387760 -132868823 - L1PA14 LINE L1 -904 5257 5236 3590 131 62 5 chr2 120387767 120388369 -132868214 - L1PA16 LINE L1 -6 6160 5525 410 237 41 0 chr2 120388746 120388843 -132867740 - MER5C DNA MER1_type -210 114 14 297 397 0 0 chr2 120389201 120389380 -132867203 - L1MEd LINE L1 -5354 765 587 1215 219 106 100 chr2 120389409 120389901 -132866682 + MLT1D LTR MaLR 5 499 -6 276 314 29 29 chr2 120389948 120390050 -132866533 - MER5A DNA MER1_type -84 105 4 21 0 0 0 chr2 120390159 120390180 -132866403 + AT_rich Low_complexity Low_complexity 1 21 0 46 45 0 0 chr2 120390618 120390685 -132865898 + AT_rich Low_complexity Low_complexity 1 67 0 183 100 0 0 chr2 120390718 120390748 -132865835 + (TA)n Simple_repeat Simple_repeat 1 30 0 273 243 81 0 chr2 120390751 120390825 -132865758 - MIR SINE MIR -71 191 112 189 347 0 13 chr2 120390945 120391020 -132865563 - MIR SINE MIR -169 93 20 306 354 153 27 chr2 120391261 120392218 -132864365 + L2 LINE L2 1352 2428 -886 257 316 107 37 chr2 120392281 120392525 -132864058 - LTR41 LTR ERVL -10 763 503 372 202 11 22 chr2 120393034 120393123 -132863460 - LTR41 LTR ERVL -668 105 18 240 200 0 0 chr2 120395511 120395561 -132861022 + (CATATA)n Simple_repeat Simple_repeat 2 51 0 24 77 0 0 chr2 120395947 120395999 -132860584 + AT_rich Low_complexity Low_complexity 1 52 0 231 337 12 0 chr2 120396828 120396914 -132859669 + L1M4 LINE L1 3969 4055 -2091 226 246 15 15 chr2 120396934 120396999 -132859584 + LTR16A1 LTR ERVL 387 451 -6 24 106 0 0 chr2 120397006 120397100 -132859483 + AT_rich Low_complexity Low_complexity 1 94 0 22 70 0 0 chr2 120397333 120397376 -132859207 + AT_rich Low_complexity Low_complexity 1 43 0 951 245 64 70 chr2 120397693 120398162 -132858421 + LTR53 LTR ERVL 43 508 -11 305 333 24 18 chr2 120398173 120398338 -132858245 + L1M4 LINE L1 3712 3877 -2269 221 140 60 0 chr2 120398568 120398618 -132857965 + A-rich Low_complexity Low_complexity 5 57 0 22 70 0 0 chr2 120399203 120399246 -132857337 + AT_rich Low_complexity Low_complexity 1 43 0 4627 180 13 0 chr2 120399672 120400511 -132856072 + L1P4 LINE L1 3794 4643 -1503 42685 33 22 1 chr2 120400511 120406537 -132850046 + L1PA2 LINE L1 2 6155 0 4027 144 20 1 chr2 120406533 120407387 -132849196 + L1P4 LINE L1 4630 5496 -665 * 2947 192 19 36 chr2 120407965 120408637 -132847946 - MER67B LTR ERV1 0 661 1 225 83 0 0 chr2 120409213 120409249 -132847334 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 874 39 0 0 chr2 120409250 120409353 -132847230 - L1PA5 LINE L1 -14 6140 6038 2153 122 7 0 chr2 120409623 120409927 -132846656 + AluSq SINE Alu 1 306 -7 1343 111 0 0 chr2 120410176 120410357 -132846226 + AluSg SINE Alu 5 185 -125 270 272 0 25 chr2 120411656 120411737 -132844846 + MER103 DNA DNA 43 121 -45 243 347 102 34 chr2 120411995 120412171 -132844412 - MIR SINE MIR -10 252 65 2533 66 0 0 chr2 120412366 120412669 -132843914 - AluY SINE Alu -7 304 2 23 54 0 0 chr2 120413682 120413719 -132842864 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr2 120414133 120414155 -132842428 + AT_rich Low_complexity Low_complexity 1 22 0 392 288 118 6 chr2 120414642 120414812 -132841771 + MIR SINE MIR 34 222 -40 483 228 63 70 chr2 120415266 120415424 -132841159 - Ricksha DNA DNA -2350 896 740 1504 175 35 124 chr2 120415424 120415917 -132840666 - MLT2B3 LTR ERVL -8 546 3 5481 172 42 11 chr2 120416100 120418176 -132838407 - L1MA8 LINE L1 -5 6286 4162 59 15 0 0 chr2 120418546 120418612 -132837971 + AT_rich Low_complexity Low_complexity 1 66 0 417 103 0 0 chr2 120420418 120420486 -132836097 + (TA)n Simple_repeat Simple_repeat 2 69 0 5162 141 33 6 chr2 120421005 120422017 -132834566 - L1PA15 LINE L1 -7 6158 5123 616 247 43 31 chr2 120422022 120422277 -132834306 + ORSL DNA AcHobo 2 259 -16 639 175 17 0 chr2 120422331 120422451 -132834132 - LTR49 LTR ERV1 0 595 474 3062 136 26 14 chr2 120422452 120422958 -132833625 - MER41E LTR ERV1 0 512 1 1182 227 54 86 chr2 120423072 120423628 -132832955 - MER41E-int LTR ERV1 -4 6672 6135 1538 111 0 0 chr2 120423859 120424057 -132832526 - AluSc SINE Alu -111 198 1 737 329 26 23 chr2 120424057 120424526 -132832057 - PRIMA41-int LTR ERV1 -3926 3830 3357 456 152 13 0 chr2 120424526 120424605 -132831978 + MADE1 DNA Mariner 1 80 0 737 329 26 23 chr2 120424605 120424749 -132831834 - PRIMA41-int LTR ERV1 -4399 3357 3215 394 301 47 35 chr2 120425051 120425295 -132831288 - PRIMA41-int LTR ERV1 -1784 3014 2640 531 374 30 13 chr2 120425581 120426276 -132830307 - PRIMA41-int LTR ERV1 -5358 2398 1692 294 288 60 43 chr2 120426523 120426707 -132829876 - PRIMA41-int LTR ERV1 -4959 1717 1531 314 281 22 0 chr2 120427404 120427493 -132829090 - PRIMA41-int LTR ERV1 -2774 1511 1421 923 201 13 27 chr2 120427728 120427952 -132828631 - MER41E LTR ERV1 -1 511 291 1486 183 21 0 chr2 120428091 120428376 -132828207 - MER41E LTR ERV1 -221 291 1 1243 134 113 8 chr2 120428493 120428732 -132827851 - LTR49 LTR ERV1 -118 477 214 2496 106 17 0 chr2 120428733 120429082 -132827501 + THE1A LTR MaLR 1 355 0 10979 109 8 8 chr2 120429082 120430338 -132826245 + THE1A-int LTR MaLR 1 1257 -323 1857 107 8 0 chr2 120430338 120430590 -132825993 - AluSq SINE Alu -21 292 39 10979 109 8 8 chr2 120430590 120430914 -132825669 + THE1A-int LTR MaLR 1257 1580 0 2233 99 20 12 chr2 120430916 120431258 -132825325 + THE1A LTR MaLR 3 347 -8 879 172 23 50 chr2 120431269 120431490 -132825093 - LTR49 LTR ERV1 -380 215 1 2239 102 3 0 chr2 120431732 120432027 -132824556 - AluSp SINE Alu -17 296 1 21 57 0 0 chr2 120432064 120432099 -132824484 + AT_rich Low_complexity Low_complexity 1 35 0 246 326 28 64 chr2 120432915 120433056 -132823527 - MIR SINE MIR -121 141 6 310 207 46 46 chr2 120433300 120433387 -132823196 - MLT1J2 LTR MaLR 0 450 364 292 277 47 61 chr2 120433730 120433878 -132822705 - MER97a DNA MER1_type? -748 146 1 1384 206 17 21 chr2 120434624 120434915 -132821668 + AluJo SINE Alu 3 292 -10 2882 83 0 2 chr2 120435792 120436189 -132820394 - L1PA13 LINE L1 -2 6161 5766 259 250 0 0 chr2 120436258 120436322 -132820261 + MER89 LTR ERV1 2 65 -494 643 282 98 7 chr2 120436361 120436648 -132819935 + MER89 LTR ERV1 238 550 -9 228 173 19 19 chr2 120437242 120437294 -132819289 + (TG)n Simple_repeat Simple_repeat 1 52 0 406 266 53 49 chr2 120437643 120437869 -132818714 - L1MC4 LINE L1 -980 7062 6836 26 64 0 0 chr2 120438642 120438689 -132817894 + AT_rich Low_complexity Low_complexity 1 47 0 1744 168 7 0 chr2 120439579 120439859 -132816724 + AluSx SINE Alu 1 282 -30 248 247 75 0 chr2 120440822 120440915 -132815668 + MER53 DNA DNA 2 101 -88 505 105 0 42 chr2 120440977 120441072 -132815511 - MER53 DNA DNA -76 113 23 203 161 0 0 chr2 120441229 120441260 -132815323 + (TG)n Simple_repeat Simple_repeat 2 32 0 181 119 34 153 chr2 120442379 120442438 -132814145 + L2 LINE L2 2735 2786 -528 551 261 127 42 chr2 120442747 120443603 -132812980 + L1MCa LINE L1 857 1986 -4621 830 265 70 26 chr2 120443737 120444134 -132812449 + L1MCa LINE L1 2253 2663 -3763 3351 56 16 11 chr2 120444134 120444580 -132812003 - LTR7 LTR ERV1 -2 448 1 830 265 70 26 chr2 120444580 120444909 -132811674 + L1MCa LINE L1 2663 2976 -3450 502 245 43 40 chr2 120444931 120445233 -132811350 + L1MCa LINE L1 3175 3477 -2949 1860 229 52 10 chr2 120445312 120446326 -132810257 + L1MB4 LINE L1 5106 6180 0 746 220 190 12 chr2 120446479 120446811 -132809772 - L1ME2 LINE L1 -14 6150 5760 6584 155 17 9 chr2 120446831 120449081 -132807502 - L1MA1 LINE L1 -4 7717 5449 2704 90 92 5 chr2 120449086 120449498 -132807085 - LTR7 LTR ERV1 -2 448 1 2097 117 48 13 chr2 120449498 120449875 -132806708 - HERVH LTR ERV1 0 7713 7324 1194 153 23 0 chr2 120449875 120450090 -132806493 - HERVH LTR ERV1 -1894 5819 5600 7358 126 16 5 chr2 120450091 120451794 -132804789 - HERVH LTR ERV1 -1858 5233 3492 906 133 7 0 chr2 120451784 120451934 -132804649 - HERVH LTR ERV1 -4423 3290 3140 * 14025 100 11 7 chr2 120451928 120454108 -132802475 - HERVH LTR ERV1 -4726 2987 800 2931 90 11 26 chr2 120454166 120454632 -132801951 - HERVH LTR ERV1 -7254 459 1 2744 85 95 5 chr2 120454634 120455045 -132801538 - LTR7 LTR ERV1 -2 448 1 3594 190 8 57 chr2 120455045 120455877 -132800706 - L1MA1 LINE L1 -2115 5450 4670 2667 81 103 2 chr2 120455877 120456284 -132800299 - LTR7 LTR ERV1 -2 448 1 3594 190 8 57 chr2 120456284 120456409 -132800174 - L1MA1 LINE L1 -2895 4670 4540 9602 160 41 12 chr2 120456416 120458595 -132797988 - L1MA1 LINE L1 -3594 3971 1728 1760 150 60 44 chr2 120458597 120458964 -132797619 - THE1C LTR MaLR 0 375 3 8180 144 62 17 chr2 120458967 120460478 -132796105 - THE1C-int LTR MaLR -1 1579 1 1847 138 48 50 chr2 120460478 120460854 -132795729 - THE1C LTR MaLR 0 375 1 3254 215 37 12 chr2 120460855 120462431 -132794152 - L1MA1 LINE L1 -5836 1729 12 5434 251 63 40 chr2 120462531 120463205 -132793378 - L1MC1 LINE L1 -17 7111 6454 2025 93 4 0 chr2 120463205 120463463 -132793120 - AluSp SINE Alu -15 298 40 5434 251 63 40 chr2 120463463 120466158 -132790425 - L1MC1 LINE L1 -674 6454 3462 2116 229 59 38 chr2 120466158 120466765 -132789818 - L1MC1 LINE L1 -5791 1150 531 7172 252 73 29 chr2 120466781 120470479 -132786104 - L1PA13 LINE L1 -2907 3890 1 741 286 145 9 chr2 120470486 120471323 -132785260 - L1ME LINE L1 -676 5488 4532 776 267 31 48 chr2 120471766 120472118 -132784465 - L1MC1 LINE L1 -5957 466 121 332 340 69 15 chr2 120472486 120472689 -132783894 + MIR SINE MIR 20 233 -29 661 240 69 21 chr2 120474102 120474167 -132782416 - L1ME1 LINE L1 -103 6063 6003 1946 101 56 21 chr2 120474167 120474454 -132782129 - AluSg SINE Alu -13 297 1 661 240 69 21 chr2 120474454 120474621 -132781962 - L1ME1 LINE L1 -163 6003 5820 * 2227 256 166 30 chr2 120474620 120475961 -132780622 - L1ME1 LINE L1 -1414 4732 3210 478 253 25 13 chr2 120476132 120476290 -132780293 - L1ME1 LINE L1 -3325 2821 2662 239 225 0 70 chr2 120476679 120476750 -132779833 - MLT2D LTR ERVL -348 66 1 833 197 208 10 chr2 120478190 120478537 -132778046 + Tigger2a DNA MER2_type 2 444 0 36 23 0 0 chr2 120478882 120478925 -132777658 + AT_rich Low_complexity Low_complexity 1 43 0 1097 153 123 20 chr2 120479691 120479894 -132776689 + AluJb SINE Alu 72 295 -17 2009 125 3 0 chr2 120479929 120480216 -132776367 + AluSx SINE Alu 1 288 -24 745 247 65 75 chr2 120480367 120480646 -132775937 - MLT1B LTR MaLR 0 390 99 1811 132 37 4 chr2 120480853 120481125 -132775458 - AluSx SINE Alu -31 281 1 333 174 93 12 chr2 120481155 120481241 -132775342 - Charlie4 DNA MER1_type -1107 854 762 1522 170 24 44 chr2 120481499 120481793 -132774790 + AluJo SINE Alu 1 288 -24 350 242 8 31 chr2 120482388 120482516 -132774067 - Charlie4 DNA MER1_type -1667 294 170 300 360 42 38 chr2 120483551 120483790 -132772793 + L1M3e LINE L1 464 703 -6301 4822 235 91 85 chr2 120483988 120488928 -132767655 + L1MA4 LINE L1 452 6106 -572 1982 243 48 58 chr2 120488934 120489772 -132766811 + L1M3e LINE L1 3 831 -6199 330 313 39 0 chr2 120489780 120489908 -132766675 + L1M3e LINE L1 600 732 -6298 1401 104 0 5 chr2 120490021 120490214 -132766369 + AluSp SINE Alu 117 308 -5 3196 222 27 23 chr2 120490334 120491621 -132764962 - L1MB2 LINE L1 -265 6142 4840 1954 129 35 0 chr2 120491621 120491907 -132764676 + AluSc SINE Alu 1 296 -13 3196 222 27 23 chr2 120491907 120492053 -132764530 - L1MB2 LINE L1 -1567 4840 4696 815 205 39 4 chr2 120492080 120492309 -132764274 - L1MB2 LINE L1 -3997 2387 2151 407 323 206 6 chr2 120492758 120493083 -132763500 - L2 LINE L2 0 3313 2924 1039 179 66 160 chr2 120493112 120493569 -132763014 + L1MA4 LINE L1 6386 6796 -2 293 327 148 14 chr2 120493622 120493845 -132762738 - L2 LINE L2 -456 2858 2606 3606 264 30 28 chr2 120494061 120494959 -132761624 + L1P4 LINE L1 2294 3197 -2949 2074 109 7 7 chr2 120494959 120495252 -132761331 - AluSq SINE Alu -20 293 1 3606 264 30 28 chr2 120495252 120495613 -132760970 + L1P4 LINE L1 3197 3556 -2590 466 214 10 0 chr2 120495616 120495719 -132760864 + L1 LINE L1 4553 4656 -1490 1085 214 5 0 chr2 120495727 120495928 -132760655 + AluJb SINE Alu 7 208 -104 2938 175 27 38 chr2 120496007 120496945 -132759638 + L1P4 LINE L1 4649 5588 -580 6654 151 222 20 chr2 120496945 120498413 -132758170 + Tigger1 DNA MER2_type 655 2418 0 12953 85 17 9 chr2 120498456 120501255 -132755328 + L1PA7 LINE L1 3322 6153 -1 22 0 0 0 chr2 120501303 120501325 -132755258 + AT_rich Low_complexity Low_complexity 1 22 0 315 350 43 31 chr2 120502550 120502713 -132753870 - MIR SINE MIR -24 238 74 413 244 0 0 chr2 120503116 120503194 -132753389 - Tigger7 DNA MER2_type -2409 78 1 285 29 0 0 chr2 120503433 120503467 -132753116 + (CA)n Simple_repeat Simple_repeat 2 35 0 21 0 0 0 chr2 120503502 120503523 -132753060 + AT_rich Low_complexity Low_complexity 1 21 0 415 378 82 7 chr2 120503964 120504234 -132752349 - L2 LINE L2 -2796 518 229 1688 256 115 66 chr2 120504298 120505268 -132751315 + L1 LINE L1 3595 4655 -1491 2083 125 0 10 chr2 120505268 120505573 -132751010 - AluY SINE Alu -9 302 1 1688 256 115 66 chr2 120505573 120505990 -132750593 + L1 LINE L1 4655 5050 -1096 370 234 57 40 chr2 120506143 120506267 -132750316 + L1 LINE L1 5025 5150 -996 648 217 60 31 chr2 120506414 120506581 -132750002 + MLT1F1 LTR MaLR 10 189 -371 1993 238 40 12 chr2 120506583 120507011 -132749572 - MER68 LTR ERV1 0 562 123 278 293 52 17 chr2 120507026 120507142 -132749441 + MLT1K LTR MaLR 69 188 -400 * 287 53 0 0 chr2 120507125 120507163 -132749420 + 5S rRNA rRNA 3 40 -81 491 149 23 11 chr2 120507221 120507308 -132749275 - MER68 LTR ERV1 -472 90 3 839 227 227 7 chr2 120507316 120507611 -132748972 + MLT1F1 LTR MaLR 190 549 -18 1718 236 26 44 chr2 120507623 120507712 -132748871 + MLT1D LTR MaLR 13 102 -403 1962 111 21 4 chr2 120507712 120507991 -132748592 - AluSq SINE Alu -10 303 20 1718 236 26 44 chr2 120507991 120508402 -132748181 + MLT1D LTR MaLR 102 504 -1 784 326 111 21 chr2 120508426 120508803 -132747780 - L2 LINE L2 -62 3251 2841 2047 210 26 21 chr2 120508826 120509250 -132747333 - Tigger7 DNA MER2_type -212 521 96 348 327 9 9 chr2 120509285 120509395 -132747188 - Tigger7 DNA MER2_type -2377 110 1 1771 236 184 13 chr2 120510520 120511134 -132745449 + L1MC4 LINE L1 7113 7831 -211 261 243 29 0 chr2 120511710 120511780 -132744803 + (TA)n Simple_repeat Simple_repeat 1 72 0 281 210 0 62 chr2 120512826 120512907 -132743676 - MER5C DNA MER1_type -1 323 248 22 0 0 0 chr2 120513366 120513388 -132743195 + AT_rich Low_complexity Low_complexity 1 22 0 28 0 0 0 chr2 120513546 120513574 -132743009 + AT_rich Low_complexity Low_complexity 1 28 0 238 355 65 9 chr2 120514190 120514297 -132742286 + MLT1L LTR MaLR 409 521 -94 3792 88 0 6 chr2 120515736 120516250 -132740333 + MER9 LTR ERVK 1 511 0 4347 86 5 3 chr2 120516250 120516841 -132739742 + HERVK9 LTR ERVK 1 592 -5324 11974 63 4 0 chr2 120516841 120518354 -132738229 + HERVK9 LTR ERVK 1268 2786 -3130 1911 43 0 0 chr2 120518354 120518585 -132737998 + HERVK9 LTR ERVK 3711 3941 -1975 * 7709 96 3 6 chr2 120518584 120519640 -132736943 + HERVK9 LTR ERVK 4582 5634 -282 2238 112 14 0 chr2 120519674 120520013 -132736570 + HERVK9 LTR ERVK 4916 5916 0 3703 81 14 8 chr2 120520013 120520521 -132736062 + MER9 LTR ERVK 1 511 0 1704 159 51 46 chr2 120521239 120521611 -132734972 - THE1C LTR MaLR -1 374 1 8793 152 49 17 chr2 120521615 120523141 -132733442 - THE1C-int LTR MaLR -4 1576 2 1849 167 38 30 chr2 120523142 120523514 -132733069 - THE1C LTR MaLR 0 375 1 1470 165 4 8 chr2 120523514 120523774 -132732809 - THE1C-int LTR MaLR 0 1580 1322 820 275 36 29 chr2 120524436 120524712 -132731871 + LTR16A LTR ERVL 1 278 -172 531 269 138 59 chr2 120524730 120525173 -132731410 - L1MC4 LINE L1 -69 7973 7496 23 33 0 0 chr2 120525903 120525933 -132730650 + AT_rich Low_complexity Low_complexity 1 30 0 2986 100 0 35 chr2 120526490 120526970 -132729613 + HERVH LTR ERV1 2533 2995 -4718 805 136 79 0 chr2 120526949 120527089 -132729494 + HERVH LTR ERV1 3140 3290 -4423 * 1492 155 4 4 chr2 120527079 120527324 -132729259 + HERVH LTR ERV1 3492 3736 -3977 1886 147 5 5 chr2 120527334 120527642 -132728941 + HERVH LTR ERV1 3995 4290 -3423 * 2393 114 22 3 chr2 120527640 120528008 -132728575 + HERVH LTR ERV1 4221 4595 -3118 504 343 131 11 chr2 120528260 120528793 -132727790 - MLT1L LTR MaLR -18 597 1 311 258 30 68 chr2 120529007 120529139 -132727444 + MIR SINE MIR 80 206 -56 6063 25 6 0 chr2 120529374 120530084 -132726499 - L1P LINE L1 -1400 4746 4033 1218 266 27 0 chr2 120530603 120530971 -132725612 + L1 LINE L1 4483 4860 -1286 * 4072 164 92 27 chr2 120530968 120531795 -132724788 - L1PA6 LINE L1 -2 6152 5272 293 130 0 0 chr2 120531795 120531849 -132724734 + L1 LINE L1 4981 5034 -1112 348 127 0 0 chr2 120532743 120532798 -132723785 + (CA)n Simple_repeat Simple_repeat 2 56 0 13394 118 1 5 chr2 120533321 120535258 -132721325 - HERV9 LTR ERV1 -2270 6129 4200 1025 195 36 0 chr2 120535630 120535825 -132720758 - MER2 DNA MER2_type -136 209 8 2112 113 0 7 chr2 120535994 120536307 -132720276 + AluSx SINE Alu 1 311 0 1423 162 60 75 chr2 120536884 120537289 -132719294 - L1MA7 LINE L1 -10 6281 5886 430 225 29 13 chr2 120537877 120537976 -132718607 + MER5A DNA MER1_type 4 103 -86 34224 87 10 19 chr2 120540715 120544145 -132712438 - L1PA8 LINE L1 -3 6169 2816 197 33 33 0 chr2 120544145 120544175 -132712408 + (TTTTG)n Simple_repeat Simple_repeat 5 35 0 34224 87 10 19 chr2 120544175 120546350 -132710233 - L1PA8 LINE L1 -3356 2816 623 392 254 76 49 chr2 120546557 120546742 -132709841 - MIR SINE MIR -25 237 48 21 71 0 0 chr2 120549159 120549201 -132707382 + AT_rich Low_complexity Low_complexity 1 42 0 2481 271 55 28 chr2 120549434 120549460 -132707123 + L1MD1 LINE L1 438 462 -6078 6795 65 34 0 chr2 120549460 120550326 -132706257 + MER11D LTR ERVK 3 897 0 2481 271 55 28 chr2 120550326 120550598 -132705985 + L1MD1 LINE L1 462 725 -5815 2064 129 28 33 chr2 120550598 120550962 -132705621 + THE1B LTR MaLR 3 364 0 2481 271 55 28 chr2 120550962 120551412 -132705171 + L1MD1 LINE L1 725 1207 -5333 2128 255 74 21 chr2 120551403 120552579 -132704004 + L1MD1 LINE L1 2378 3624 -2916 * 207 0 0 0 chr2 120552628 120552651 -132703932 + (A)n Simple_repeat Simple_repeat 1 23 0 3695 226 54 9 chr2 120552698 120553832 -132702751 + L1MD1 LINE L1 5419 6600 -36 889 208 39 24 chr2 120554075 120554282 -132702301 - L1MD1 LINE L1 -182 6060 5851 906 128 109 0 chr2 120557062 120557218 -132699365 + MER51A LTR ERV1 1 173 -461 2441 106 0 0 chr2 120557320 120557679 -132698904 + HERV9 LTR ERV1 6398 6756 -1643 * 6899 115 10 20 chr2 120557678 120558666 -132697917 + HERV9 LTR ERV1 7353 8332 -67 7776 35 0 0 chr2 120558666 120559563 -132697020 + MER11D LTR ERVK 1 897 0 6899 115 10 20 chr2 120559563 120559631 -132696952 + HERV9 LTR ERV1 8332 8399 0 229 167 0 0 chr2 120559631 120559673 -132696910 + LTR30 LTR ERV1 1 42 -680 548 159 60 40 chr2 120559674 120559836 -132696747 + LTR12 LTR ERV1 142 1983 -455 329 247 0 0 chr2 120559906 120559983 -132696600 + LTR30 LTR ERV1 544 620 -102 792 154 24 0 chr2 120559983 120560106 -132696477 + LTR12 LTR ERV1 355 480 -234 4747 195 15 31 chr2 120560107 120561940 -132694643 + L1PA16 LINE L1 4364 6162 -4 2270 271 76 38 chr2 120561946 120564484 -132692099 - L1 LINE L1 -2978 3232 774 275 351 13 46 chr2 120564672 120564823 -132691760 - L1 LINE L1 -5499 632 487 1943 48 0 0 chr2 120564877 120565107 -132691476 - AluY SINE Alu -5 306 77 246 322 90 43 chr2 120565143 120565398 -132691185 - L1 LINE L1 -5710 431 165 361 323 33 34 chr2 120565656 120565826 -132690757 + MIR SINE MIR 22 196 -66 11647 211 47 34 chr2 120566107 120570545 -132686038 + L1MA4 LINE L1 6 4711 -1771 2213 88 0 20 chr2 120570545 120570840 -132685743 + AluSg SINE Alu 1 289 -21 11647 211 47 34 chr2 120570840 120572630 -132683953 + L1MA4 LINE L1 4711 6476 -6 289 178 0 0 chr2 120572638 120572683 -132683900 + Alu SINE Alu 243 287 -15 27 29 0 0 chr2 120572689 120572723 -132683860 + AT_rich Low_complexity Low_complexity 1 34 0 1886 204 42 82 chr2 120573321 120573896 -132682687 + LTR6A LTR ERV1 13 564 0 1196 172 42 10 chr2 120573899 120573974 -132682609 + MER51A LTR ERV1 379 450 -190 2279 52 21 0 chr2 120573974 120574261 -132682322 - AluY SINE Alu -18 293 1 1196 172 42 10 chr2 120574261 120574435 -132682148 + MER51A LTR ERV1 450 629 -11 1111 238 133 33 chr2 120574486 120574945 -132681638 - MLT1D LTR MaLR 0 505 1 22 56 0 0 chr2 120575467 120575503 -132681080 + AT_rich Low_complexity Low_complexity 1 36 0 395 322 100 35 chr2 120576166 120576396 -132680187 - MIR SINE MIR -2 260 16 350 392 50 26 chr2 120577131 120577442 -132679141 + L2 LINE L2 2716 3038 -275 1596 175 7 30 chr2 120577518 120577815 -132678768 + AluJo SINE Alu 1 290 -22 189 214 36 18 chr2 120577816 120577872 -132678711 - L2 LINE L2 -28 3285 3229 23 0 0 0 chr2 120578656 120578679 -132677904 + AT_rich Low_complexity Low_complexity 1 23 0 201 353 0 0 chr2 120578828 120578879 -132677704 - L2 LINE L2 0 3272 3222 271 379 21 7 chr2 120579035 120579180 -132677403 - L2 LINE L2 -203 3069 2923 27 49 0 0 chr2 120580143 120580184 -132676399 + AT_rich Low_complexity Low_complexity 1 41 0 200 169 11 62 chr2 120580423 120580600 -132675983 + (TA)n Simple_repeat Simple_repeat 1 168 0 204 125 0 0 chr2 120580644 120580676 -132675907 + (TG)n Simple_repeat Simple_repeat 1 32 0 6755 229 61 23 chr2 120580730 120583633 -132672950 - L1MB1 LINE L1 -1 6167 3180 1879 184 3 0 chr2 120583629 120583934 -132672649 + L1PA15-16 LINE L1 1 306 -6543 * 7563 153 29 8 chr2 120583932 120585329 -132671254 + L1PA15-16 LINE L1 1456 2882 -3967 5211 260 31 17 chr2 120585443 120587211 -132669372 + L1 LINE L1 3257 5049 -1800 729 122 8 8 chr2 120587232 120587352 -132669231 + LTR12 LTR ERV1 1 234 -480 1744 123 4 4 chr2 120587401 120587654 -132668929 + HERV9 LTR ERV1 1677 1929 -6470 6605 104 1 7 chr2 120587660 120588588 -132667995 + HERV9 LTR ERV1 2435 3357 -5042 344 360 24 20 chr2 120588965 120589236 -132667347 + L2 LINE L2 2774 3044 -228 31 68 0 0 chr2 120589731 120589790 -132666793 + AT_rich Low_complexity Low_complexity 1 59 0 224 305 91 43 chr2 120589863 120590073 -132666510 - L2 LINE L2 -9 3304 3085 344 320 136 7 chr2 120591229 120591376 -132665207 + MIR SINE MIR 53 218 -44 244 155 17 17 chr2 120591501 120591559 -132665024 + (CATATA)n Simple_repeat Simple_repeat 3 60 0 2054 123 0 0 chr2 120592506 120592817 -132663766 + AluSx SINE Alu 1 311 0 22 35 0 0 chr2 120593181 120593210 -132663373 + AT_rich Low_complexity Low_complexity 1 29 0 5306 167 30 16 chr2 120594094 120595461 -132661122 - L1MA6 LINE L1 0 6300 4906 4553 209 30 9 chr2 120595448 120596484 -132660099 + L1MA6 LINE L1 3850 4907 -1239 * 222 325 39 0 chr2 120596729 120596806 -132659777 + MIR SINE MIR 75 154 -108 208 333 130 0 chr2 120597143 120597212 -132659371 - MIR SINE MIR -165 97 20 * 624 243 165 19 chr2 120597157 120597363 -132659220 + MIR SINE MIR 15 250 -12 23 0 0 0 chr2 120597753 120597776 -132658807 + AT_rich Low_complexity Low_complexity 1 23 0 421 240 0 19 chr2 120597780 120597884 -132658699 - L1MC5 LINE L1 -52 7909 7808 364 299 34 54 chr2 120598803 120598950 -132657633 - L2 LINE L2 -927 2387 2244 334 374 87 15 chr2 120598953 120599357 -132657226 - L2 LINE L2 -1369 1945 1513 306 0 0 0 chr2 120599449 120599483 -132657100 + (TG)n Simple_repeat Simple_repeat 2 35 0 237 305 0 0 chr2 120599848 120599930 -132656653 - L1MC4 LINE L1 -1347 6695 6614 310 208 14 0 chr2 120599948 120600020 -132656563 + L1MCa LINE L1 1995 2067 -4359 * 353 292 0 0 chr2 120599957 120600046 -132656537 - L1MC4 LINE L1 -1340 6702 6614 327 278 0 22 chr2 120600053 120600143 -132656440 - L1MC4 LINE L1 -1340 6702 6615 * 337 303 0 0 chr2 120600069 120600158 -132656425 + L1MC4 LINE L1 6615 6703 -1339 * 347 264 0 22 chr2 120600119 120600210 -132656373 - L1MC4 LINE L1 -1340 6702 6614 246 181 56 14 chr2 120600272 120600344 -132656239 + (CATATA)n Simple_repeat Simple_repeat 3 77 0 26 30 0 0 chr2 120600994 120601027 -132655556 + AT_rich Low_complexity Low_complexity 1 33 0 1365 297 75 29 chr2 120603936 120604565 -132652018 - MLT2F LTR ERVL -3 660 3 386 294 59 24 chr2 120604726 120604896 -132651687 - MLT2E LTR ERVL -420 208 33 269 384 30 35 chr2 120605562 120605765 -132650818 - L2 LINE L2 -904 2410 2209 214 338 138 40 chr2 120605866 120606263 -132650320 - L2 LINE L2 -68 3245 2810 858 199 0 59 chr2 120606364 120606550 -132650033 - MER5A DNA MER1_type -2 187 13 560 321 153 31 chr2 120607736 120608153 -132648430 - L2 LINE L2 -18 3295 2828 383 234 162 0 chr2 120608694 120608848 -132647735 - L1MEc LINE L1 -3789 2426 2248 * 1060 284 98 22 chr2 120608843 120609669 -132646914 - L1MEc LINE L1 -4482 1914 1026 1229 212 8 4 chr2 120609671 120609878 -132646705 + LTR57 LTR ERVL 129 339 -72 207 0 0 0 chr2 120609878 120609901 -132646682 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1229 212 8 4 chr2 120609901 120609929 -132646654 + LTR57 LTR ERVL 339 365 -46 2390 281 37 7 chr2 120609930 120610693 -132645890 - L1MEc LINE L1 -5575 821 36 251 338 0 0 chr2 120611064 120611132 -132645451 - L3 LINE CR1 -212 1365 1298 251 302 22 115 chr2 120611156 120611338 -132645245 + L3 LINE CR1 1410 1574 -3 223 238 0 0 chr2 120611467 120611509 -132645074 + (TG)n Simple_repeat Simple_repeat 2 43 0 247 130 0 0 chr2 120611509 120611555 -132645028 + LTR66 LTR ERVL 394 439 -171 503 312 72 81 chr2 120613588 120614431 -132642152 + L1MC/D LINE L1 4405 5240 -906 455 351 68 8 chr2 120614462 120614832 -132641751 + L1MC/D LINE L1 5292 5683 -2125 369 268 36 72 chr2 120615214 120615352 -132641231 + L2 LINE L2 3139 3271 -1 27 0 0 0 chr2 120616280 120616307 -132640276 + AT_rich Low_complexity Low_complexity 1 27 0 23 0 0 0 chr2 120616816 120616839 -132639744 + AT_rich Low_complexity Low_complexity 1 23 0 501 277 79 30 chr2 120617389 120617669 -132638914 - L1ME3A LINE L1 -250 5920 5635 21 0 0 0 chr2 120617908 120617929 -132638654 + AT_rich Low_complexity Low_complexity 1 21 0 360 241 14 106 chr2 120618164 120618305 -132638278 + L1MCa LINE L1 199 326 -6100 255 152 0 0 chr2 120618335 120618381 -132638202 + (TG)n Simple_repeat Simple_repeat 1 46 0 3760 255 39 29 chr2 120618381 120619584 -132636999 + L1MCa LINE L1 1996 3186 -3240 606 120 0 0 chr2 120619584 120619684 -132636899 + L1MA4 LINE L1 6195 6294 -6 3760 255 39 29 chr2 120619684 120619696 -132636887 + L1MCa LINE L1 3186 3196 -3230 348 110 0 110 chr2 120619696 120619778 -132636805 + L1MA4 LINE L1 6221 6293 -7 3760 255 39 29 chr2 120619778 120620171 -132636412 + L1MCa LINE L1 3196 3629 -2797 2147 124 0 7 chr2 120620171 120620478 -132636105 - AluSx SINE Alu -3 309 5 3760 255 39 29 chr2 120620478 120620796 -132635787 + L1MCa LINE L1 3629 3942 -2484 1645 105 17 0 chr2 120620910 120621148 -132635435 + L1PA7 LINE L1 5 246 -6215 * 29589 102 16 10 chr2 120621147 120626457 -132630126 + L1PA7 LINE L1 1144 6462 -7 834 236 60 0 chr2 120626452 120626702 -132629881 + L1M4 LINE L1 5127 5391 -755 * 757 240 0 6 chr2 120626714 120626893 -132629690 + L1MC1 LINE L1 6139 6316 -17 572 224 9 0 chr2 120627996 120628112 -132628471 + FLAM_A SINE Alu 5 121 -12 208 111 56 0 chr2 120628769 120628805 -132627778 + A-rich Low_complexity Low_complexity 3 40 0 6700 68 25 0 chr2 120629769 120630978 -132625605 - L1PA7 LINE L1 -13 6141 4922 208 135 0 0 chr2 120631487 120631524 -132625059 + (T)n Simple_repeat Simple_repeat 1 37 0 23 0 0 0 chr2 120631864 120631887 -132624696 + AT_rich Low_complexity Low_complexity 1 23 0 1242 246 88 41 chr2 120633658 120634097 -132622486 + MLT1C LTR MaLR 1 467 0 185 313 104 9 chr2 120635217 120635332 -132621251 + MIR SINE MIR 2 127 -135 456 235 82 95 chr2 120635334 120635628 -132620955 - MLT1J LTR MaLR -2 509 220 189 0 0 0 chr2 120635995 120636016 -132620567 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 285 266 229 18 chr2 120636016 120636125 -132620458 - L2 LINE L2 -17 3255 3124 993 255 70 82 chr2 120636222 120636770 -132619813 - L1ME3A LINE L1 -130 6034 5497 339 340 133 38 chr2 120636801 120637148 -132619435 + L2 LINE L2 2367 2746 -568 709 203 40 6 chr2 120637168 120637345 -132619238 - L1MB5 LINE L1 -305 5869 5687 * 1131 243 17 1 chr2 120637328 120637651 -132618932 + L1MB5 LINE L1 5849 6179 -1 455 200 61 0 chr2 120637649 120637764 -132618819 + L1MB7 LINE L1 6061 6182 -2 * 327 348 137 45 chr2 120637847 120638272 -132618311 + L2 LINE L2 2837 3300 -13 244 344 49 0 chr2 120640391 120640513 -132616070 - MIR SINE MIR -72 190 63 212 179 0 0 chr2 120641146 120641185 -132615398 + A-rich Low_complexity Low_complexity 1 39 0 23 0 0 0 chr2 120641374 120641397 -132615186 + AT_rich Low_complexity Low_complexity 1 23 0 248 232 497 0 chr2 120642153 120642304 -132614279 + MIR SINE MIR 15 240 -22 684 172 55 2 chr2 120642504 120642642 -132613941 + MLT2C1 LTR ERVL 1 124 -273 663 288 42 0 chr2 120642673 120642885 -132613698 + ERVL LTR ERVL 3794 4014 -1750 2876 237 113 37 chr2 120642885 120643446 -132613137 - L1M4 LINE L1 -1329 4817 4300 2645 104 68 43 chr2 120643446 120643916 -132612667 - L1MA2 LINE L1 0 6304 5823 2876 237 113 37 chr2 120643916 120644642 -132611941 - L1M4 LINE L1 -1846 4300 3433 1371 238 148 23 chr2 120644636 120645297 -132611286 - L1MCb LINE L1 -3990 2574 1831 * 763 184 75 9 chr2 120645271 120645483 -132611100 - L1MCb LINE L1 -4999 1565 1340 * 2653 257 45 85 chr2 120645512 120646053 -132610530 - L1MCb LINE L1 -4889 1156 595 1902 108 199 36 chr2 120646053 120646440 -132610143 + LTR47A LTR ERVL 1 450 -2 2653 257 45 85 chr2 120646440 120646648 -132609935 - L1MCb LINE L1 -5450 595 380 209 57 29 0 chr2 120646648 120646683 -132609900 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 2653 257 45 85 chr2 120646683 120647233 -132609350 - L1MCb LINE L1 -5665 380 3 1177 156 0 0 chr2 120647495 120647681 -132608902 + AluSq SINE Alu 2 187 -126 335 209 0 0 chr2 120647683 120647750 -132608833 + AluS SINE Alu 228 294 -7 228 242 81 0 chr2 120647814 120647876 -132608707 - LTR33 LTR ERVL -454 67 1 222 233 33 0 chr2 120648752 120648812 -132607771 - MIR SINE MIR -81 127 66 22 0 0 0 chr2 120649156 120649178 -132607405 + AT_rich Low_complexity Low_complexity 1 22 0 738 209 50 1 chr2 120649313 120649591 -132606992 - MER119 DNA MER1_type -2 581 262 201 78 0 133 chr2 120649621 120649711 -132606872 + (CAATT)n Simple_repeat Simple_repeat 2 79 0 23 0 0 0 chr2 120650074 120650097 -132606486 + AT_rich Low_complexity Low_complexity 1 23 0 1035 294 90 48 chr2 120650210 120650710 -132605873 + LTR33 LTR ERVL 1 521 0 315 344 49 54 chr2 120650741 120651166 -132605417 - L1MC/D LINE L1 -2062 5746 5324 3107 324 117 35 chr2 120651449 120653399 -132603184 + L2 LINE L2 311 2421 -893 286 290 101 45 chr2 120654206 120654582 -132602001 - HAL1 LINE L1 -737 1770 1374 23 54 0 0 chr2 120656058 120656095 -132600488 + AT_rich Low_complexity Low_complexity 1 37 0 2186 85 0 7 chr2 120656796 120657079 -132599504 + AluSc SINE Alu 13 293 -16 324 0 0 0 chr2 120657856 120657892 -132598691 + (TG)n Simple_repeat Simple_repeat 2 37 0 22 56 0 0 chr2 120658395 120658431 -132598152 + AT_rich Low_complexity Low_complexity 1 36 0 232 345 24 0 chr2 120658531 120658615 -132597968 + MER20B DNA MER1_type 43 128 -655 303 315 22 6 chr2 120658727 120658908 -132597675 - L1MEd LINE L1 -4971 1583 1400 309 312 76 76 chr2 120659065 120659304 -132597279 - L1MEd LINE L1 -5272 1282 1041 2189 108 7 0 chr2 120659304 120659610 -132596973 - AluY SINE Alu -3 308 1 28 48 0 0 chr2 120660161 120660203 -132596380 + AT_rich Low_complexity Low_complexity 1 42 0 291 254 64 52 chr2 120661798 120661971 -132594612 - L1M4 LINE L1 -2713 3433 3259 10031 165 26 13 chr2 120662062 120664003 -132592580 + L1P LINE L1 1730 3695 -2451 669 215 6 6 chr2 120664019 120664196 -132592387 - L1M4 LINE L1 -2957 3189 3013 689 305 67 44 chr2 120664217 120664558 -132592025 - L1MEd LINE L1 -5596 449 101 228 182 0 0 chr2 120664671 120664715 -132591868 + (TA)n Simple_repeat Simple_repeat 2 45 0 50 51 0 0 chr2 120664921 120664999 -132591584 + AT_rich Low_complexity Low_complexity 1 78 0 300 378 37 0 chr2 120666863 120666998 -132589585 - MIR SINE MIR -72 190 51 181 279 177 0 chr2 120667017 120667096 -132589487 - MIR SINE MIR -116 146 54 443 235 34 8 chr2 120668088 120668207 -132588376 + L1MC4a LINE L1 6338 6459 -1349 878 283 230 14 chr2 120668237 120668810 -132587773 + L1MC4 LINE L1 6704 7400 -642 2348 101 48 25 chr2 120668815 120669171 -132587412 + THE1B LTR MaLR 1 364 0 9109 120 2 18 chr2 120669171 120670772 -132585811 + THE1B-int LTR MaLR 1 1580 0 2145 128 57 25 chr2 120670772 120671125 -132585458 + THE1B LTR MaLR 1 364 0 871 278 42 35 chr2 120671129 120671554 -132585029 + L1MC4 LINE L1 7403 7830 -212 227 190 17 0 chr2 120671583 120671641 -132584942 + L1MD3 LINE L1 7927 7985 -10 317 297 65 32 chr2 120672081 120672236 -132584347 - MIR SINE MIR -13 249 90 475 229 69 23 chr2 120674688 120674819 -132581764 - MER69A DNA AcHobo -3 174 38 645 229 56 125 chr2 120674935 120675310 -132581273 - MLT1G1 LTR MaLR -126 416 68 4277 253 52 44 chr2 120675332 120677353 -132579230 + L1PA13 LINE L1 839 2993 -4581 12571 239 21 20 chr2 120677559 120681152 -132575431 + L1PA13 LINE L1 2799 6403 -1181 546 175 21 56 chr2 120681152 120681241 -132575342 - LTR19C LTR ERV1 0 779 695 2487 60 0 0 chr2 120681241 120681542 -132575041 + AluY SINE Alu 1 301 -10 546 175 21 56 chr2 120681542 120681595 -132574988 - LTR19C LTR ERV1 -84 695 642 185 313 36 48 chr2 120681709 120681792 -132574791 - MIR SINE MIR -124 138 57 2169 100 3 3 chr2 120681799 120682090 -132574493 + AluSq SINE Alu 1 291 -22 34 24 0 0 chr2 120682104 120682145 -132574438 + AT_rich Low_complexity Low_complexity 1 41 0 389 317 8 33 chr2 120682302 120682422 -132574161 + L2 LINE L2 3156 3272 0 201 161 36 18 chr2 120682750 120682806 -132573777 + (TTTG)n Simple_repeat Simple_repeat 3 59 0 33 56 0 0 chr2 120683560 120683614 -132572969 + AT_rich Low_complexity Low_complexity 1 54 0 1356 346 39 15 chr2 120683971 120684621 -132571962 + HERV16 LTR ERVL 739 1403 -3593 557 351 60 18 chr2 120684721 120685335 -132571248 + HERV16 LTR ERVL 2901 3646 -2118 308 338 94 0 chr2 120686049 120686209 -132570374 + HERV16 LTR ERVL 4164 4338 -1147 1958 145 0 14 chr2 120686236 120686533 -132570050 - AluSx SINE Alu -19 293 1 202 411 8 16 chr2 120687099 120687228 -132569355 - MIR3 SINE MIR -6 202 75 25 51 0 0 chr2 120687396 120687435 -132569148 + AT_rich Low_complexity Low_complexity 1 39 0 243 186 39 29 chr2 120688626 120688728 -132567855 + (TA)n Simple_repeat Simple_repeat 2 104 0 24 67 0 0 chr2 120689506 120689551 -132567032 + AT_rich Low_complexity Low_complexity 1 45 0 368 275 15 46 chr2 120689659 120689790 -132566793 + L2 LINE L2 3186 3312 -1 1060 171 10 20 chr2 120690035 120690234 -132566349 + AluJo SINE Alu 102 298 -14 7293 41 8 0 chr2 120690347 120691768 -132564815 - L1PA5 LINE L1 0 6154 4730 320 303 62 94 chr2 120692695 120693131 -132563452 + HAL1 LINE L1 827 1248 -1259 184 172 0 0 chr2 120693137 120693166 -132563417 - MIR SINE MIR -185 77 49 27 62 0 0 chr2 120693628 120693676 -132562907 + AT_rich Low_complexity Low_complexity 1 48 0 306 288 98 20 chr2 120693951 120694104 -132562479 + L1M4 LINE L1 2199 2363 -3783 552 326 52 38 chr2 120694334 120694903 -132561680 - L2 LINE L2 -3 3310 2492 2260 143 11 11 chr2 120695072 120695436 -132561147 - THE1B LTR MaLR 0 364 1 10942 122 1 8 chr2 120695440 120697025 -132559558 - THE1B-int LTR MaLR -6 1574 1 1723 178 63 20 chr2 120697025 120697374 -132559209 - THE1B LTR MaLR 0 364 1 27 29 0 0 chr2 120697379 120697413 -132559170 + AT_rich Low_complexity Low_complexity 1 34 0 374 294 130 24 chr2 120697572 120697865 -132558718 + L1M4 LINE L1 2911 3234 -2912 771 217 79 111 chr2 120698115 120698473 -132558110 + MLT1D LTR MaLR 1 346 -159 2609 119 0 8 chr2 120698473 120698851 -132557732 + THE1C LTR MaLR 1 375 0 771 217 79 111 chr2 120698851 120698897 -132557686 + MLT1D LTR MaLR 346 392 -113 262 237 17 0 chr2 120698899 120698958 -132557625 + MLT1D LTR MaLR 446 505 0 2359 82 3 16 chr2 120699496 120699811 -132556772 + AluY SINE Alu 1 311 0 2240 118 7 0 chr2 120699872 120700176 -132556407 + AluSx SINE Alu 1 306 -6 26 74 0 0 chr2 120700262 120700316 -132556267 + AT_rich Low_complexity Low_complexity 1 54 0 591 296 101 49 chr2 120700798 120700973 -132555610 - LTR33A LTR ERVL -8 515 350 243 0 0 0 chr2 120700973 120701000 -132555583 + (GA)n Simple_repeat Simple_repeat 2 28 0 591 296 101 49 chr2 120701000 120701339 -132555244 - LTR33A LTR ERVL -173 350 3 24 0 0 0 chr2 120702573 120702597 -132553986 + AT_rich Low_complexity Low_complexity 1 24 0 352 224 20 102 chr2 120703813 120703960 -132552623 - HAL1 LINE L1 -998 1509 1375 423 279 61 21 chr2 120704103 120704383 -132552200 - HAL1 LINE L1 -1321 1186 896 1282 242 11 36 chr2 120704393 120704689 -132551894 + L1MC3 LINE L1 5460 5747 -2038 2032 194 19 37 chr2 120704689 120705080 -132551503 + MSTB LTR MaLR 3 387 -39 1802 107 0 0 chr2 120705080 120705314 -132551269 - AluY SINE Alu -77 234 1 2032 194 19 37 chr2 120705314 120705354 -132551229 + MSTB LTR MaLR 387 426 0 1282 242 11 36 chr2 120705354 120705416 -132551167 + L1MC3 LINE L1 5747 5809 -1976 359 133 17 0 chr2 120705419 120705479 -132551104 - MLT1A1 LTR MaLR 0 457 397 573 239 116 54 chr2 120705593 120705852 -132550731 - MLT1A1 LTR MaLR -90 275 1 3868 226 52 16 chr2 120705852 120706867 -132549716 + L1MC3 LINE L1 5808 6785 -1000 1621 187 152 8 chr2 120706867 120707241 -132549342 - MSTA LTR MaLR 0 428 1 9220 149 10 36 chr2 120707241 120708861 -132547722 - MSTA-int LTR MaLR 0 1580 3 1464 171 222 8 chr2 120708863 120709214 -132547369 - MSTA LTR MaLR 0 428 3 393 58 0 0 chr2 120709216 120709268 -132547315 + (CA)n Simple_repeat Simple_repeat 1 52 0 3868 226 52 16 chr2 120709268 120709298 -132547285 + L1MC3 LINE L1 6785 6898 -887 2662 196 133 10 chr2 120709303 120709990 -132546593 + L1MC3 LINE L1 6995 7765 -20 940 263 101 23 chr2 120710004 120710399 -132546184 + L1MC4a LINE L1 5428 5853 -1955 290 324 99 42 chr2 120710905 120711288 -132545295 - L2 LINE L2 -600 2714 2310 2175 146 8 3 chr2 120714297 120714653 -132541930 - L1PB3 LINE L1 -3 6151 5794 927 104 7 57 chr2 120714659 120714845 -132541738 - THE1C LTR MaLR 0 375 194 1896 139 12 13 chr2 120714846 120715303 -132541280 + L1P5 LINE L1 5104 5563 -591 6029 217 99 15 chr2 120715306 120718407 -132538176 - L1PA15-16 LINE L1 -2300 4562 1808 234 0 0 0 chr2 120718407 120718433 -132538150 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 6029 217 99 15 chr2 120718433 120720403 -132536180 - L1PA15-16 LINE L1 -5054 1808 6 300 299 23 52 chr2 120720422 120720596 -132535987 - MER90 LTR ERV1 -206 369 201 22 35 0 0 chr2 120721033 120721062 -132535521 + AT_rich Low_complexity Low_complexity 1 29 0 181 370 86 19 chr2 120721220 120721382 -132535201 - L2 LINE L2 -168 3104 2932 2243 86 10 0 chr2 120722069 120722372 -132534211 + AluY SINE Alu 1 306 -5 293 364 42 0 chr2 120723034 120723152 -132533431 - L2 LINE L2 -24 3289 3167 5295 169 43 20 chr2 120723191 120723920 -132532663 + L1MA5A LINE L1 4280 4991 -1306 1808 169 0 25 chr2 120723920 120724234 -132532349 + AluSx SINE Alu 1 306 -6 5295 169 43 20 chr2 120724234 120725476 -132531107 + L1MA5A LINE L1 4991 6293 -4 180 0 0 0 chr2 120725745 120725765 -132530818 + (TTG)n Simple_repeat Simple_repeat 2 21 0 402 257 46 6 chr2 120725962 120726137 -132530446 - L1ME1 LINE L1 -3 6163 5982 346 319 30 41 chr2 120726412 120726581 -132530002 - L1ME LINE L1 -5632 438 272 2274 117 0 0 chr2 120726585 120726894 -132529689 - AluSx SINE Alu -1 311 3 322 298 85 91 chr2 120727017 120727382 -132529201 - L1ME LINE L1 -5602 468 105 2097 207 26 2 chr2 120727382 120727798 -132528785 - MSTB LTR MaLR 0 426 1 322 298 85 91 chr2 120727798 120727892 -132528691 - L1ME LINE L1 -5965 105 12 615 307 42 21 chr2 120728260 120728501 -132528082 - MIR SINE MIR -3 259 14 2049 112 7 10 chr2 120728991 120729287 -132527296 - AluSq SINE Alu -18 295 1 3273 177 41 44 chr2 120730888 120731662 -132524921 + MER70-int LTR ERVL 303 1074 -4269 302 307 40 58 chr2 120732066 120732340 -132524243 + MER66-int LTR ERV1 953 1221 -5901 4558 70 39 6 chr2 120732507 120733592 -132522991 - MER11A LTR ERVK 0 1266 1 256 313 35 26 chr2 120733794 120733909 -132522674 + MER66-int LTR ERV1 1616 1731 -5391 748 319 31 32 chr2 120734466 120735022 -132521561 + MER66-int LTR ERV1 3817 4755 -2758 2017 129 14 0 chr2 120735238 120735525 -132521058 + AluSq SINE Alu 1 291 -22 556 334 35 25 chr2 120735571 120736028 -132520555 + MER66-int LTR ERV1 4754 5059 -2063 514 326 43 48 chr2 120735996 120736435 -132520148 + MER66-int LTR ERV1 7169 7605 -515 * 421 365 5 5 chr2 120737389 120737413 -132519170 + MER70-int LTR ERVL 4520 4543 -480 427 219 55 55 chr2 120737413 120737541 -132519042 + MER66-int LTR ERV1 6079 6206 -470 421 365 5 5 chr2 120737541 120737592 -132518991 + MER70-int LTR ERVL 4542 4722 -301 1297 92 0 0 chr2 120737739 120737902 -132518681 - AluSq SINE Alu -24 289 127 2006 107 3 33 chr2 120737921 120738221 -132518362 - AluSx SINE Alu -21 291 1 587 161 8 0 chr2 120739053 120739171 -132517412 + GA-rich Low_complexity Low_complexity 3 121 0 2274 61 0 64 chr2 120739263 120739593 -132516990 - AluY SINE Alu -2 309 1 240 292 14 0 chr2 120740153 120740225 -132516358 + MER117 DNA MER1_type 76 148 -49 318 266 73 0 chr2 120740426 120740535 -132516048 + MER112 DNA MER1_type 138 254 -6 2411 68 0 31 chr2 120740805 120741126 -132515457 - AluY SINE Alu 0 311 1 300 223 27 164 chr2 120742971 120742989 -132513594 + MER112 DNA MER1_type 3 22 -238 2158 130 0 3 chr2 120742989 120743297 -132513286 + AluSx SINE Alu 1 307 -5 300 223 27 164 chr2 120743297 120743570 -132513013 + MER112 DNA MER1_type 22 254 -6 403 335 95 16 chr2 120743610 120743852 -132512731 + L1ME3A LINE L1 5691 5951 -219 24 0 0 0 chr2 120744100 120744124 -132512459 + AT_rich Low_complexity Low_complexity 1 24 0 328 271 76 28 chr2 120744153 120744297 -132512286 + L1M4 LINE L1 3345 3495 -2651 627 219 45 39 chr2 120744675 120744853 -132511730 - MER58A DNA MER1_type -4 220 42 500 299 64 55 chr2 120744965 120745497 -132511086 - L1ME LINE L1 -375 5795 5259 2302 271 66 20 chr2 120745555 120746601 -132509982 - L1ME LINE L1 -1058 5088 3995 244 274 19 9 chr2 120746655 120746761 -132509822 - L1ME LINE L1 -2157 3989 3883 11171 191 51 18 chr2 120746762 120746801 -132509782 + L1MA4A LINE L1 8 44 -6805 414 0 0 0 chr2 120746801 120746847 -132509736 + (CA)n Simple_repeat Simple_repeat 1 46 0 11171 191 51 18 chr2 120746847 120749033 -132507550 + L1MA4A LINE L1 44 2306 -4543 3840 184 19 3 chr2 120749021 120750018 -132506565 + L1MA4A LINE L1 5647 6666 -339 * 6908 179 24 34 chr2 120750128 120751469 -132505114 + HERVL68 LTR ERVL 3243 4569 -1195 307 202 0 91 chr2 120751480 120751579 -132505004 + MLT2B2 LTR ERVL 362 451 -64 398 290 0 0 chr2 120751585 120751678 -132504905 + HERVL68 LTR ERVL 4027 4119 -1535 200 35 35 0 chr2 120751786 120751815 -132504768 + (TA)n Simple_repeat Simple_repeat 1 30 0 323 91 0 0 chr2 120751819 120751863 -132504720 + MLT2C1 LTR ERVL 354 397 0 1669 180 46 61 chr2 120752094 120752488 -132504095 + MLT1B LTR MaLR 1 388 -2 225 281 37 24 chr2 120752760 120752842 -132503741 + MLT1E-int LTR MaLR 760 842 -529 253 269 0 124 chr2 120753011 120753156 -132503427 + MLT1E-int LTR MaLR 1074 1200 -171 1473 279 62 47 chr2 120753312 120753890 -132502693 + MLT1E LTR MaLR 7 593 0 1135 297 65 35 chr2 120753904 120754007 -132502576 + MLT1G LTR MaLR 105 203 -387 1778 103 0 0 chr2 120754007 120754240 -132502343 + AluSg/x SINE Alu 71 303 -9 1135 297 65 35 chr2 120754240 120754570 -132502013 + MLT1G LTR MaLR 203 551 -39 2496 304 99 24 chr2 120754573 120755612 -132500971 + HERVL68 LTR ERVL 2527 3643 -2121 704 248 35 0 chr2 120755634 120755779 -132500804 + HERVL68 LTR ERVL 4190 4339 -1315 228 318 204 25 chr2 120756015 120756216 -132500367 + L2 LINE L2 1861 2097 -1217 518 355 48 12 chr2 120756276 120756524 -132500059 + MIR SINE MIR 2 258 -4 425 361 75 43 chr2 120756623 120757158 -132499425 + L2 LINE L2 2425 2976 -338 328 295 9 0 chr2 120757652 120757764 -132498819 + (TA)n Simple_repeat Simple_repeat 2 114 0 483 247 37 32 chr2 120758477 120758667 -132497916 - L1ME3A LINE L1 -222 5948 5758 315 283 40 40 chr2 120758668 120758841 -132497742 - L1ME3A LINE L1 -580 5582 5410 389 244 67 26 chr2 120758852 120759045 -132497538 - L1ME3A LINE L1 -3200 2946 2746 2644 224 26 6 chr2 120759056 120759600 -132496983 + MER68 LTR ERV1 1 555 -7 565 250 39 73 chr2 120759610 120759842 -132496741 + MER68-int LTR ERV1 4 227 -3964 * 8593 244 64 30 chr2 120759716 120760152 -132496431 + HERVL68 LTR ERVL 60 480 -2557 3774 102 5 11 chr2 120760152 120760709 -132495874 + MER41A LTR ERV1 1 554 0 8593 244 64 30 chr2 120760709 120763066 -132493517 + HERVL68 LTR ERVL 480 3032 -5 760 220 0 42 chr2 120763068 120763149 -132493434 + MER68 LTR ERV1 376 448 -114 1817 197 7 61 chr2 120763149 120763561 -132493022 - MLT1B LTR MaLR 0 390 1 760 220 0 42 chr2 120763561 120763647 -132492936 + MER68 LTR ERV1 448 536 -26 1934 154 18 6 chr2 120764344 120764687 -132491896 + MER47A DNA MER2_type 6 352 -14 207 0 0 0 chr2 120766318 120766341 -132490242 + (A)n Simple_repeat Simple_repeat 1 23 0 197 164 98 49 chr2 120766491 120766552 -132490031 - MER5A DNA MER1_type 0 189 126 306 244 37 0 chr2 120766654 120766736 -132489847 - MLT2B2 LTR ERVL -430 85 1 12679 209 19 23 chr2 120767051 120770966 -132485617 - L1PA16 LINE L1 0 6869 2941 2168 104 0 3 chr2 120770966 120771291 -132485292 - AluY SINE Alu 0 311 1 12679 209 19 23 chr2 120771291 120771636 -132484947 - L1PA16 LINE L1 -3928 2941 2596 1905 158 3 25 chr2 120771636 120771952 -132484631 - AluSx SINE Alu -3 309 1 12679 209 19 23 chr2 120771952 120774655 -132481928 - L1PA16 LINE L1 -4273 2596 1 356 272 58 10 chr2 120774685 120774788 -132481795 - HAL1 LINE L1 -670 1837 1730 488 254 71 115 chr2 120774856 120775593 -132480990 - HAL1 LINE L1 -957 1550 847 499 157 59 49 chr2 120775595 120775697 -132480886 - MLT1F1 LTR MaLR -5 562 460 233 111 0 19 chr2 120776034 120776088 -132480495 + LTR66 LTR ERVL 387 439 -171 354 194 0 0 chr2 120776088 120776160 -132480423 + (CATATA)n Simple_repeat Simple_repeat 4 75 0 2058 136 10 0 chr2 120776188 120776483 -132480100 - AluSx SINE Alu -14 298 1 1723 179 0 4 chr2 120777008 120777288 -132479295 + AluJo SINE Alu 1 279 -33 233 239 60 0 chr2 120778471 120778538 -132478045 - MER103 DNA DNA -68 98 28 7935 215 39 41 chr2 120780350 120781174 -132475409 + L1MCa LINE L1 7 831 -5776 2113 189 28 21 chr2 120781174 120781603 -132474980 + MSTB1 LTR MaLR 1 432 0 7935 215 39 41 chr2 120781603 120783257 -132473326 + L1MCa LINE L1 831 2692 -3915 1819 126 61 16 chr2 120783620 120783997 -132472586 + LTR7 LTR ERV1 1 450 0 8571 167 8 10 chr2 120784249 120786705 -132469878 - L1PA13 LINE L1 -20 6143 3697 1047 162 37 58 chr2 120786700 120786941 -132469642 + L1PA13 LINE L1 3454 3689 -2457 * 290 354 111 25 chr2 120787328 120787723 -132468860 + L2 LINE L2 2520 2948 -366 191 239 193 0 chr2 120787714 120787802 -132468781 + MIR SINE MIR 155 259 -3 * 35 24 0 0 chr2 120788497 120788539 -132468044 + AT_rich Low_complexity Low_complexity 1 42 0 252 261 170 48 chr2 120789854 120790031 -132466552 + MLT1L LTR MaLR 347 546 -69 2176 182 0 18 chr2 120790031 120790416 -132466167 - MLT1C LTR MaLR 0 467 90 303 203 0 0 chr2 120790411 120790475 -132466108 - MLT1C LTR MaLR -157 310 247 * 923 238 92 66 chr2 120790486 120790865 -132465718 - MLT1C LTR MaLR -18 449 61 292 294 73 0 chr2 120792086 120792195 -132464388 - MIR SINE MIR -48 214 98 279 0 0 0 chr2 120792259 120792290 -132464293 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 1133 104 141 5 chr2 120792326 120792518 -132464065 + MER41B LTR ERV1 416 633 -2 8435 192 19 3 chr2 120792518 120794051 -132462532 + MSTB1-int LTR MaLR 94 1651 0 723 146 0 0 chr2 120794051 120794161 -132462422 + MSTB1 LTR MaLR 1 110 -318 495 138 25 5 chr2 120794152 120794254 -132462329 + THE1B LTR MaLR 270 364 0 * 271 167 0 39 chr2 120795535 120795613 -132460970 + GA-rich Low_complexity Low_complexity 2 76 0 1727 155 96 56 chr2 120795960 120796335 -132460248 - MLT1B LTR MaLR 0 390 1 374 302 124 37 chr2 120796502 120796850 -132459733 - L1ME4a LINE L1 -83 6038 5661 647 315 68 19 chr2 120797938 120798468 -132458115 + MLT2E LTR ERVL 19 609 -19 181 285 179 16 chr2 120798635 120798758 -132457825 + MIR SINE MIR 119 261 -1 817 292 64 19 chr2 120799553 120800087 -132456496 + MLT2E LTR ERVL 19 614 -14 313 319 222 5 chr2 120800411 120800596 -132455987 + MIR SINE MIR 8 232 -30 1396 165 39 93 chr2 120801375 120801762 -132454821 - L1MA7 LINE L1 -24 6267 5902 246 263 38 12 chr2 120801766 120801846 -132454737 + MIR SINE MIR 119 200 -62 1952 256 103 40 chr2 120801868 120802665 -132453918 + L1ME1 LINE L1 5319 6165 -1 230 302 176 25 chr2 120804217 120804376 -132452207 + MER5A DNA MER1_type 4 186 -3 401 217 0 0 chr2 120804549 120804618 -132451965 + L2 LINE L2 3221 3289 -24 1215 238 127 23 chr2 120804665 120805105 -132451478 + MLT2B1 LTR ERVL 1 534 -20 557 309 17 11 chr2 120805176 120805354 -132451229 - MER8 DNA MER2_type -60 179 1 6702 57 17 2 chr2 120805515 120806415 -132450168 + L1PA5 LINE L1 3036 3948 -2198 5475 54 1 3 chr2 120806415 120807617 -132448966 + L1PA5 LINE L1 4852 6154 0 561 321 46 5 chr2 120809871 120810067 -132446516 + MIR SINE MIR 35 238 -24 1549 271 22 24 chr2 120810592 120811043 -132445540 + MLT1E2 LTR MaLR 50 499 -127 487 212 0 0 chr2 120811156 120811255 -132445328 + MLT1D LTR MaLR 404 502 -3 416 280 109 50 chr2 120811855 120811965 -132444618 + L2 LINE L2 3038 3140 -173 1342 208 112 18 chr2 120811965 120812350 -132444233 + LTR52 LTR ERVL 1 421 0 416 280 109 50 chr2 120812350 120812478 -132444105 + L2 LINE L2 3140 3290 -23 260 358 32 49 chr2 120812732 120812855 -132443728 - L2 LINE L2 -2 3311 3191 342 280 23 7 chr2 120813242 120813385 -132443198 + MLT1J2 LTR MaLR 294 395 -14 202 225 0 0 chr2 120815161 120815201 -132441382 + A-rich Low_complexity Low_complexity 1 40 0 861 141 0 0 chr2 120815367 120815495 -132441088 - FLAM_C SINE Alu -5 128 1 12683 184 25 29 chr2 120816112 120820068 -132436515 - L1MA1 LINE L1 -6 7715 3706 5790 113 19 33 chr2 120820078 120820943 -132435640 - L1PA8 LINE L1 -1 6171 5296 2169 132 0 3 chr2 120820943 120821253 -132435330 - AluSg SINE Alu -1 309 1 5790 113 19 33 chr2 120821253 120822197 -132434386 - L1PA8 LINE L1 -876 5296 4375 4043 119 3 7 chr2 120822191 120822807 -132433776 + L1PA8 LINE L1 3758 4371 -1775 1777 166 30 13 chr2 120822803 120823247 -132433336 - L1MA1 LINE L1 -3844 3721 3268 * 231 114 0 0 chr2 120823630 120823665 -132432918 - MLT2C2 LTR ERVL -2 462 428 306 0 0 0 chr2 120823666 120823700 -132432883 + (TG)n Simple_repeat Simple_repeat 2 35 0 1827 173 38 27 chr2 120824197 120824568 -132432015 - THE1C LTR MaLR 0 375 1 9180 146 38 10 chr2 120824568 120826105 -132430478 - THE1C-int LTR MaLR 0 1580 1 1710 186 32 24 chr2 120826105 120826477 -132430106 - THE1C LTR MaLR 0 375 1 303 323 85 44 chr2 120826592 120826840 -132429743 - L1MC4a LINE L1 -1855 5953 5696 244 273 11 11 chr2 120827014 120827102 -132429481 - L1M2 LINE L1 -837 5454 5367 232 398 62 0 chr2 120829264 120829392 -132427191 - L2 LINE L2 -10 3262 3127 1903 250 102 32 chr2 120829889 120831055 -132425528 - L1MDb LINE L1 -2750 4815 3549 938 247 109 40 chr2 120831412 120832130 -132424453 - L1MDb LINE L1 -4582 2983 2221 291 316 38 63 chr2 120832492 120832808 -132423775 - L1MDb LINE L1 -5313 2255 1948 24 0 0 0 chr2 120832954 120832978 -132423605 + AT_rich Low_complexity Low_complexity 1 24 0 297 289 79 7 chr2 120833121 120833273 -132423310 - MLT1D LTR MaLR -342 163 1 903 293 36 100 chr2 120833273 120834000 -132422583 - MLT1D-int LTR MaLR 0 1371 692 2109 248 20 5 chr2 120834198 120834792 -132421791 - MLT1D-int LTR MaLR -768 603 1 1484 198 104 58 chr2 120834794 120835149 -132421434 - MLT1D LTR MaLR -2 503 119 1848 156 3 10 chr2 120835149 120835463 -132421120 - AluSx SINE Alu 0 312 1 1484 198 104 58 chr2 120835463 120835588 -132420995 - MLT1D LTR MaLR -386 119 1 20258 87 14 6 chr2 120835848 120838806 -132417777 + L1PA7 LINE L1 1 2983 -3163 4798 95 8 12 chr2 120838960 120839678 -132416905 + L1PA7 LINE L1 5439 6153 -1 974 106 0 0 chr2 120839680 120839821 -132416762 + THE1B-int LTR MaLR 850 990 -590 * 2778 90 15 2 chr2 120839812 120840214 -132416369 + THE1B-int LTR MaLR 1174 1580 0 953 116 24 18 chr2 120840214 120840406 -132416177 + THE1B LTR MaLR 1 194 -161 11187 197 45 21 chr2 120840572 120841558 -132415025 - L1M4 LINE L1 -5002 2563 1602 2018 146 27 29 chr2 120841558 120841934 -132414649 - THE1C LTR MaLR 0 375 1 11187 197 45 21 chr2 120841934 120843301 -132413282 - L1M4 LINE L1 -5963 1602 145 2772 16 0 3 chr2 120843301 120843613 -132412970 + AluYa5 SINE Alu 1 311 0 11187 197 45 21 chr2 120843613 120843746 -132412837 - L1M4 LINE L1 -7420 145 17 667 285 6 6 chr2 120843793 120843972 -132412611 + LTR28 LTR ERV1 1 179 -841 261 0 0 0 chr2 120844212 120844241 -132412342 + (TG)n Simple_repeat Simple_repeat 2 30 0 198 0 0 0 chr2 120844240 120844262 -132412321 + (TA)n Simple_repeat Simple_repeat 1 22 0 * 282 56 0 0 chr2 120844262 120844298 -132412285 + (GA)n Simple_repeat Simple_repeat 1 36 0 202 261 43 123 chr2 120845208 120845346 -132411237 - MIR SINE MIR -12 250 124 22 35 0 0 chr2 120845835 120845864 -132410719 + AT_rich Low_complexity Low_complexity 1 29 0 831 177 68 4 chr2 120845865 120846146 -132410437 + L1MB2 LINE L1 5164 5466 -717 406 189 0 0 chr2 120846147 120846221 -132410362 + MSTC LTR MaLR 1 74 -354 7562 28 0 2 chr2 120846282 120847337 -132409246 + L1PA4 LINE L1 5101 6153 -2 530 116 0 0 chr2 120847337 120847423 -132409160 + L1P5 LINE L1 5596 5681 -475 1148 204 42 15 chr2 120847431 120847696 -132408887 + MSTC LTR MaLR 157 428 0 2729 184 27 42 chr2 120847727 120848394 -132408189 + L1MB2 LINE L1 5476 6132 -39 1016 196 74 29 chr2 120848566 120848878 -132407705 + L1MB8 LINE L1 5843 6168 -10 449 34 17 0 chr2 120848878 120848937 -132407646 + (TCTA)n Simple_repeat Simple_repeat 1 60 0 22 70 0 0 chr2 120850846 120850889 -132405694 + AT_rich Low_complexity Low_complexity 1 43 0 231 329 43 0 chr2 120851734 120851804 -132404779 + MIR SINE MIR 34 106 -102 621 187 54 0 chr2 120852100 120852266 -132404317 - MER63 DNA MER1_type -35 1027 853 231 226 0 0 chr2 120852269 120852322 -132404261 - MER63 DNA MER1_type -336 726 674 264 293 121 10 chr2 120852416 120852515 -132404068 - MIR SINE MIR -69 139 30 2117 132 8 102 chr2 120852542 120853012 -132403571 - MSTC LTR MaLR -2 426 1 22 56 0 0 chr2 120853270 120853306 -132403277 + AT_rich Low_complexity Low_complexity 1 36 0 3272 173 12 17 chr2 120853480 120854348 -132402235 + L1PA16 LINE L1 5008 5872 -294 731 78 0 17 chr2 120854350 120854465 -132402118 - AluY SINE Alu 0 311 199 1915 34 0 8 chr2 120854532 120854767 -132401816 - AluY SINE Alu -78 233 1 1277 201 40 7 chr2 120854767 120855065 -132401518 + L1PA16 LINE L1 5858 6165 -1 2546 55 0 0 chr2 120855529 120855836 -132400747 - AluY SINE Alu -4 307 1 363 92 69 0 chr2 120855901 120855988 -132400595 + (TA)n Simple_repeat Simple_repeat 1 93 0 545 177 77 131 chr2 120856003 120856113 -132400470 + Charlie1 DNA MER1_type 2416 2530 -231 1378 218 21 14 chr2 120856113 120856393 -132400190 + AluJb SINE Alu 1 282 -30 545 177 77 131 chr2 120856393 120856632 -132399951 + Charlie1 DNA MER1_type 2530 2746 -15 270 0 0 0 chr2 120858379 120858409 -132398174 + (CA)n Simple_repeat Simple_repeat 2 31 0 2765 217 53 18 chr2 120858809 120859453 -132397130 - L1MB5 LINE L1 -1 6173 5487 2134 128 0 3 chr2 120859453 120859750 -132396833 - AluSx SINE Alu -16 296 1 2765 217 53 18 chr2 120859750 120859935 -132396648 - L1MB5 LINE L1 -687 5487 5310 1947 172 23 10 chr2 120859943 120860332 -132396251 - L1PA16 LINE L1 -3 6163 5770 305 307 78 19 chr2 120861193 120861398 -132395185 - MIR SINE MIR -26 236 20 2170 141 17 0 chr2 120862507 120862862 -132393721 + MER46B DNA MER2_type 1 236 0 2385 80 0 10 chr2 120863292 120863605 -132392978 - AluSg SINE Alu 0 310 1 202 364 13 0 chr2 120863653 120863730 -132392853 + MER5A DNA MER1_type 86 163 -26 21 0 0 0 chr2 120863855 120863876 -132392707 + AT_rich Low_complexity Low_complexity 1 21 0 251 302 132 22 chr2 120863895 120864077 -132392506 - MIR SINE MIR -5 257 56 703 266 36 36 chr2 120864086 120864338 -132392245 + LTR16A LTR ERVL 1 252 -198 247 265 29 0 chr2 120864362 120864430 -132392153 + LTR16A LTR ERVL 381 450 0 535 291 104 50 chr2 120864536 120864950 -132391633 - LTR16A LTR ERVL -20 430 3 21 0 0 0 chr2 120865107 120865128 -132391455 + AT_rich Low_complexity Low_complexity 1 21 0 495 379 31 21 chr2 120865344 120865829 -132390754 - MERVL LTR ERVL -607 5157 4668 332 325 143 16 chr2 120865874 120866267 -132390316 - MERVL LTR ERVL -1173 4591 4109 225 0 0 0 chr2 120866271 120866296 -132390287 + (T)n Simple_repeat Simple_repeat 1 25 0 2155 134 35 10 chr2 120866586 120866980 -132389603 - Tigger1 DNA MER2_type 0 2418 2015 244 176 81 27 chr2 120866954 120867018 -132389565 - Tigger1 DNA MER2_type -1934 484 414 * 2421 107 8 8 chr2 120867018 120867373 -132389210 + THE1A LTR MaLR 1 355 0 5316 129 170 16 chr2 120867382 120868129 -132388454 + THE1A-int LTR MaLR 10 641 -1010 6630 72 15 0 chr2 120868129 120869402 -132387181 + L1PA7 LINE L1 4868 6153 -1 5316 129 170 16 chr2 120869402 120869882 -132386701 + THE1A-int LTR MaLR 641 1593 -58 1726 154 43 31 chr2 120869991 120870342 -132386241 + THE1A LTR MaLR 1 355 0 2325 157 14 7 chr2 120870342 120870757 -132385826 - Tigger1 DNA MER2_type -2000 418 1 1785 136 81 24 chr2 120871164 120871459 -132385124 - AluSx SINE Alu 0 312 1 306 354 28 0 chr2 120871486 120871698 -132384885 - MERVL LTR ERVL -2986 2499 2282 192 409 31 19 chr2 120872511 120872670 -132383913 - L2 LINE L2 -1 3271 3111 355 247 0 0 chr2 120873008 120873085 -132383498 + L2 LINE L2 3191 3267 -5 181 290 11 86 chr2 120873459 120873552 -132383031 + L2 LINE L2 2988 3073 -199 23 0 0 0 chr2 120874279 120874302 -132382281 + AT_rich Low_complexity Low_complexity 1 23 0 242 372 0 23 chr2 120874552 120874638 -132381945 + MIR SINE MIR 26 109 -153 2515 50 0 0 chr2 120875528 120875827 -132380756 - AluY SINE Alu -12 299 1 1857 164 3 7 chr2 120875996 120876295 -132380288 - AluJo SINE Alu -14 298 1 21 36 0 0 chr2 120876362 120876390 -132380193 + AT_rich Low_complexity Low_complexity 1 28 0 386 266 93 10 chr2 120876668 120876831 -132379752 - MLT1G LTR MaLR 0 590 426 344 260 154 0 chr2 120877592 120877761 -132378822 + L1MB5 LINE L1 65 259 -6283 549 125 0 0 chr2 120877810 120877890 -132378693 + MER84 LTR ERVI 1 80 -427 2210 152 101 58 chr2 120877893 120878015 -132378568 + MER84 LTR ERVI 1 116 -391 1513 50 55 27 chr2 120878015 120878235 -132378348 - L1PA7 LINE L1 -2 6152 5927 2210 152 101 58 chr2 120878235 120878598 -132377985 + MER84 LTR ERVI 116 507 0 4179 270 71 33 chr2 120878822 120882712 -132373871 + L1MB5 LINE L1 516 4543 -2101 256 219 0 31 chr2 120882705 120882769 -132373814 + L1MA9 LINE L1 959 1020 -6078 * 262 318 11 57 chr2 120882972 120883148 -132373435 + L1MA9 LINE L1 1546 1713 -5455 8939 202 44 22 chr2 120883594 120886898 -132369685 + L1MA9 LINE L1 3954 7333 0 3855 206 32 33 chr2 120886894 120888570 -132368013 + L1MB5 LINE L1 4985 6660 -12 * 30 45 0 0 chr2 120888758 120888802 -132367781 + AT_rich Low_complexity Low_complexity 1 44 0 6612 74 10 1 chr2 120889182 120890854 -132365729 + L1PA7 LINE L1 4469 6150 -4 1549 101 46 81 chr2 120890938 120891286 -132365297 - L1MA8 LINE L1 -13 6278 5943 213 395 27 20 chr2 120891474 120891621 -132364962 - MIR3 SINE MIR -23 185 38 1532 173 36 33 chr2 120892641 120892948 -132363635 - AluJo SINE Alu -4 308 1 29 28 0 0 chr2 120892970 120893006 -132363577 + AT_rich Low_complexity Low_complexity 1 36 0 1787 138 6 63 chr2 120893055 120893403 -132363180 - L1MA6 LINE L1 -617 5683 5356 3076 144 39 33 chr2 120893403 120894011 -132362572 + L1MA6 LINE L1 5684 6300 0 28 22 0 22 chr2 120894238 120894257 -132362326 + AT_rich Low_complexity Low_complexity 1 19 -26 735 196 38 6 chr2 120894257 120894415 -132362168 + L1MC1 LINE L1 6158 6320 -13 28 22 0 22 chr2 120894415 120894441 -132362142 + AT_rich Low_complexity Low_complexity 19 45 0 21 57 0 0 chr2 120894493 120894528 -132362055 + AT_rich Low_complexity Low_complexity 1 35 0 614 323 68 4 chr2 120896011 120896246 -132360337 - MIR SINE MIR -3 259 10 305 329 110 7 chr2 120896867 120897022 -132359561 - MER5B DNA MER1_type 0 178 8 1909 125 5 69 chr2 120897549 120897926 -132358657 - THE1A LTR MaLR 0 355 3 21 0 0 0 chr2 120898184 120898205 -132358378 + AT_rich Low_complexity Low_complexity 1 21 0 571 268 43 0 chr2 120898494 120898632 -132357951 + MER45A DNA AcHobo 28 171 -7 1367 142 0 0 chr2 120900380 120900599 -132355984 - L1MA5 LINE L1 -4 6296 6078 6420 234 113 16 chr2 120900607 120902015 -132354568 + L1MA5 LINE L1 2647 3917 -3085 1740 126 4 15 chr2 120902015 120902276 -132354307 + AluSq SINE Alu 51 308 -5 6420 234 113 16 chr2 120902276 120902904 -132353679 + L1MA5 LINE L1 3917 4483 -2519 2023 118 21 0 chr2 120902904 120903192 -132353391 + AluSx SINE Alu 1 294 -18 6420 234 113 16 chr2 120903192 120903312 -132353271 + L1MA5 LINE L1 4483 4590 -2412 315 0 0 0 chr2 120903312 120903347 -132353236 + (CA)n Simple_repeat Simple_repeat 2 36 0 6420 234 113 16 chr2 120903347 120904506 -132352077 + L1MA5 LINE L1 4590 6493 -509 2453 60 0 3 chr2 120904506 120904805 -132351778 + AluY SINE Alu 1 298 -13 6420 234 113 16 chr2 120904805 120904939 -132351644 + L1MA5 LINE L1 6493 6613 -389 313 77 49 87 chr2 120905490 120905673 -132350910 + (TTATA)n Simple_repeat Simple_repeat 4 179 0 1019 119 21 36 chr2 120905673 120905867 -132350716 + L1MA5 LINE L1 6811 7001 -1 11307 28 1 0 chr2 120906732 120908076 -132348507 - L1PA3 LINE L1 -914 5232 3888 7192 35 3 7 chr2 120908083 120908987 -132347596 + L1PA3 LINE L1 5254 6154 -1 15284 145 20 28 chr2 120909168 120911921 -132344662 - Tigger4(Zombi) DNA MER2_type 0 2731 1 204 260 20 0 chr2 120912280 120912330 -132344253 + L2 LINE L2 3262 3312 -1 205 314 83 50 chr2 120912561 120912682 -132343901 - L2 LINE L2 -940 2374 2250 24 32 0 0 chr2 120912752 120912783 -132343800 + AT_rich Low_complexity Low_complexity 1 31 0 41 21 0 0 chr2 120912871 120912919 -132343664 + AT_rich Low_complexity Low_complexity 1 48 0 1108 282 70 17 chr2 120913726 120913990 -132342593 + L1MCc LINE L1 1042 1291 -5574 2187 80 0 7 chr2 120913990 120914276 -132342307 + AluY SINE Alu 1 284 -27 1108 282 70 17 chr2 120914276 120914828 -132341755 + L1MCc LINE L1 1291 1915 -4950 431 271 73 88 chr2 120914914 120915273 -132341310 + LTR33A LTR ERVL 53 378 -145 546 82 0 0 chr2 120915466 120915551 -132341032 + (TA)n Simple_repeat Simple_repeat 1 85 0 230 0 33 0 chr2 120915621 120915651 -132340932 + (TAGA)n Simple_repeat Simple_repeat 4 34 0 1780 176 46 0 chr2 120915675 120916004 -132340579 - Tigger2 DNA MER2_type -5 2713 2370 792 203 59 25 chr2 120916627 120916829 -132339754 - MER3 DNA MER1_type 0 209 1 309 227 0 0 chr2 120917559 120917634 -132338949 - MER70B LTR ERVL -17 561 487 18642 179 32 23 chr2 120918376 120920497 -132336086 + L1M1 LINE L1 11 2112 -5453 2003 136 13 43 chr2 120920497 120920872 -132335711 - THE1B LTR MaLR 0 364 1 11352 107 6 0 chr2 120920872 120922443 -132334140 - THE1B-int LTR MaLR 0 1580 1 1912 144 16 45 chr2 120922443 120922818 -132333765 - THE1B LTR MaLR 0 364 1 18642 179 32 23 chr2 120922818 120923157 -132333426 + L1M1 LINE L1 2112 2447 -5118 216 0 0 0 chr2 120923157 120923181 -132333402 + (TAAAA)n Simple_repeat Simple_repeat 1 24 0 18642 179 32 23 chr2 120923181 120924621 -132331962 + L1M1 LINE L1 2447 3952 -3613 1057 163 54 14 chr2 120924621 120924888 -132331695 - MER61C LTR ERV1 0 434 84 9610 200 16 46 chr2 120924901 120925149 -132331434 + L1M1 LINE L1 3947 4201 -3364 2066 136 7 3 chr2 120925149 120925457 -132331126 + AluSq SINE Alu 1 309 -4 9610 200 16 46 chr2 120925457 120927005 -132329578 + L1M1 LINE L1 4201 5651 -1914 384 22 0 0 chr2 120927005 120927050 -132329533 + (CA)n Simple_repeat Simple_repeat 2 46 0 9610 200 16 46 chr2 120927050 120927745 -132328838 + L1M1 LINE L1 5651 6365 -1200 1314 144 35 8 chr2 120927749 120928005 -132328578 + L1MA3 LINE L1 6043 6305 0 22 70 0 0 chr2 120928005 120928048 -132328535 + AT_rich Low_complexity Low_complexity 1 43 0 194 370 105 17 chr2 120928427 120928608 -132327975 - MIR SINE MIR 0 262 66 5407 102 28 7 chr2 120929140 120929972 -132326611 + L1PA11 LINE L1 5328 6173 -1 428 274 9 88 chr2 120929973 120930188 -132326395 + L1ME3A LINE L1 5813 6010 -160 452 297 20 0 chr2 120930374 120930522 -132326061 + L1ME3A LINE L1 6015 6165 -5 246 292 125 0 chr2 120930556 120930652 -132325931 - MER90 LTR ERV1 -64 550 443 3992 196 50 4 chr2 120930657 120931742 -132324841 - L1MB7 LINE L1 -10 6672 5540 318 115 0 0 chr2 120931786 120931838 -132324745 + (TG)n Simple_repeat Simple_repeat 2 53 0 2405 257 35 20 chr2 120931840 120932561 -132324022 - L1MB7 LINE L1 -1907 4737 4003 1579 173 6 38 chr2 120932561 120932874 -132323709 - AluJb SINE Alu -9 303 1 2405 257 35 20 chr2 120932874 120932906 -132323677 - L1MB7 LINE L1 -2641 4003 3973 3874 138 30 36 chr2 120932972 120933837 -132322746 - L1PA14 LINE L1 -195 5966 5109 * 5662 169 13 19 chr2 120933835 120934915 -132321668 + L1P LINE L1 3509 4581 -1565 264 30 0 0 chr2 120934967 120935000 -132321583 + (TG)n Simple_repeat Simple_repeat 2 34 0 1213 236 14 27 chr2 120935012 120935308 -132321275 - L1MB7 LINE L1 -5789 753 462 350 233 0 19 chr2 120935321 120935424 -132321159 + CT-rich Low_complexity Low_complexity 3 103 0 1256 249 29 55 chr2 120935429 120935883 -132320700 - L1MB7 LINE L1 -6077 465 24 564 303 35 44 chr2 120935921 120936238 -132320345 - MER90 LTR ERV1 -185 390 77 2248 105 0 0 chr2 120937226 120937520 -132319063 + AluSq SINE Alu 1 294 -19 386 330 80 14 chr2 120937584 120937796 -132318787 - MIR SINE MIR -8 254 29 30 59 0 0 chr2 120938428 120938479 -132318104 + AT_rich Low_complexity Low_complexity 1 51 0 235 265 41 88 chr2 120939426 120939573 -132317010 - MIR3 SINE MIR 0 208 69 221 351 0 0 chr2 120940075 120940149 -132316434 - L2 LINE L2 -619 2695 2622 666 291 69 9 chr2 120940620 120940967 -132315616 + L1ME4a LINE L1 5535 5902 -219 1876 124 0 0 chr2 120941747 120942006 -132314577 - AluSc SINE Alu -12 297 39 431 257 71 0 chr2 120942027 120942140 -132314443 + MIR SINE MIR 68 188 -74 195 294 66 59 chr2 120943487 120943623 -132312960 + L2 LINE L2 2971 3107 -165 255 306 113 45 chr2 120944316 120944538 -132312045 + MIR SINE MIR 10 246 -16 2005 144 0 3 chr2 120944866 120945165 -132311418 + AluSx SINE Alu 1 298 -14 439 317 118 21 chr2 120945552 120945883 -132310700 - L2 LINE L2 -1 3312 2950 566 232 31 36 chr2 120945935 120946129 -132310454 + LTR33 LTR ERVL 327 519 -2 28 29 0 0 chr2 120946448 120946483 -132310100 + AT_rich Low_complexity Low_complexity 1 35 0 2941 41 15 0 chr2 120946922 120947503 -132309080 - L1P2 LINE L1 -538 5616 5030 1713 71 0 0 chr2 120947503 120947725 -132308858 + L1PA6 LINE L1 5924 6147 -7 22 35 0 0 chr2 120947727 120947756 -132308827 + AT_rich Low_complexity Low_complexity 1 29 0 635 180 0 0 chr2 120947864 120947975 -132308608 + Tigger3(Golem) DNA MER2_type 143 253 -2776 4117 152 84 10 chr2 120947980 120948781 -132307802 + Tigger3(Golem) DNA MER2_type 2169 3028 -1 502 344 11 16 chr2 120948783 120948969 -132307614 + ERVL LTR ERVL 3330 3514 -2250 968 227 66 45 chr2 120948972 120949324 -132307259 - MLT1C LTR MaLR -85 382 6 379 305 25 0 chr2 120949341 120949459 -132307124 + ERVL LTR ERVL 4525 4645 -1119 1110 271 84 30 chr2 120950564 120951426 -132305157 + L1ME3A LINE L1 4805 5734 -428 1480 230 93 16 chr2 120951426 120951857 -132304726 + MLT1C LTR MaLR 1 464 -3 1110 271 84 30 chr2 120951857 120951992 -132304591 + L1ME3A LINE L1 5734 5860 -302 320 277 113 7 chr2 120952029 120952170 -132304413 + L1ME3A LINE L1 6011 6166 -4 824 237 47 9 chr2 120952553 120952768 -132303815 + L1ME1 LINE L1 5898 6120 -46 279 365 19 9 chr2 120953134 120953241 -132303342 + MIR SINE MIR 14 121 -141 1774 162 82 22 chr2 120954569 120954981 -132301602 - MER61D LTR ERV1 -65 504 1 5295 133 74 103 chr2 120955022 120955348 -132301235 - Tigger3b DNA MER2_type -1798 1230 896 245 50 0 50 chr2 120955348 120955388 -132301195 + (TGAG)n Simple_repeat Simple_repeat 1 38 0 5295 133 74 103 chr2 120955388 120956327 -132300256 - Tigger3b DNA MER2_type -2132 896 1 23 0 0 0 chr2 120956468 120956491 -132300092 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 120957136 120957157 -132299426 + AT_rich Low_complexity Low_complexity 1 21 0 211 233 33 0 chr2 120957388 120957448 -132299135 + (TTG)n Simple_repeat Simple_repeat 2 63 0 430 307 20 27 chr2 120958178 120958328 -132298255 + MIR3 SINE MIR 54 202 -6 392 294 70 28 chr2 120958856 120959129 -132297454 + L1ME3A LINE L1 5625 5907 -286 2252 100 0 3 chr2 120959262 120959572 -132297011 + AluSg SINE Alu 1 309 -1 262 98 39 0 chr2 120959758 120959809 -132296774 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 25 0 0 0 chr2 120960319 120960344 -132296239 + AT_rich Low_complexity Low_complexity 1 25 0 1470 183 29 18 chr2 120960355 120960658 -132295925 + AluJo SINE Alu 1 306 0 408 20 0 0 chr2 120960661 120960710 -132295873 + (CA)n Simple_repeat Simple_repeat 2 50 0 1476 144 30 0 chr2 120960710 120960946 -132295637 - THE1-int LTR MaLR -1191 389 147 23 0 0 0 chr2 120961165 120961188 -132295395 + AT_rich Low_complexity Low_complexity 1 23 0 415 336 195 41 chr2 120961695 120962136 -132294447 + L3 LINE CR1 857 1365 -212 324 317 104 12 chr2 120962166 120962330 -132294253 + MLT1H LTR MaLR 29 207 -342 21 0 0 0 chr2 120962873 120962894 -132293689 + AT_rich Low_complexity Low_complexity 1 21 0 665 212 0 0 chr2 120962948 120963085 -132293498 + FLAM_C SINE Alu 1 137 -6 588 264 51 28 chr2 120963172 120963388 -132293195 - MIR SINE MIR -40 222 2 22 56 0 0 chr2 120963577 120963613 -132292970 + AT_rich Low_complexity Low_complexity 1 36 0 278 320 98 49 chr2 120963907 120964110 -132292473 - MIR SINE MIR -49 213 1 1875 177 11 20 chr2 120965278 120965634 -132290949 + MER47B DNA MER2_type 7 359 -59 846 204 0 12 chr2 120966560 120966732 -132289851 - Tigger1 DNA MER2_type 0 2418 2249 1528 162 0 0 chr2 120966766 120967019 -132289564 - Tigger1 DNA MER2_type -2165 253 1 204 111 0 0 chr2 120967684 120967720 -132288863 + (CA)n Simple_repeat Simple_repeat 1 36 0 194 125 0 25 chr2 120968892 120968932 -132287651 + (TC)n Simple_repeat Simple_repeat 2 40 0 583 273 102 0 chr2 120969653 120969840 -132286743 + MIR SINE MIR 54 259 -3 236 435 32 0 chr2 120970341 120970465 -132286118 - L2 LINE L2 -11 3261 3134 1141 151 0 0 chr2 120970468 120970647 -132285936 + AluSq SINE Alu 129 307 -6 999 240 98 48 chr2 120970764 120971143 -132285440 + MLT1C LTR MaLR 69 466 -1 2258 95 3 0 chr2 120971681 120971977 -132284606 + AluSx SINE Alu 1 297 -15 1504 218 38 9 chr2 120973272 120973611 -132282972 - LTR48B LTR ERV1 0 644 296 229 237 26 13 chr2 120973638 120973714 -132282869 - LTR48B LTR ERV1 -417 227 151 293 235 41 61 chr2 120973719 120973768 -132282815 - MER34 LTR ERV1 -446 96 48 1982 140 0 3 chr2 120973768 120974068 -132282515 + AluSx SINE Alu 3 301 -11 293 235 41 61 chr2 120974068 120974116 -132282467 - MER34 LTR ERV1 -494 48 1 371 194 118 47 chr2 120975337 120975540 -132281043 - LTR48 LTR ERV1 0 782 397 992 190 113 36 chr2 120975549 120975605 -132280978 - MER34C LTR ERV1 -264 321 271 2024 181 36 29 chr2 120975605 120976026 -132280557 - MSTB LTR MaLR 0 426 3 992 190 113 36 chr2 120976026 120976306 -132280277 - MER34C LTR ERV1 -314 271 4 6073 50 0 1 chr2 120977042 120977790 -132278793 - L1PA5 LINE L1 0 6154 5408 234 257 76 19 chr2 120979594 120979699 -132276884 - MIR SINE MIR -81 181 71 21 0 0 0 chr2 120980251 120980272 -132276311 + AT_rich Low_complexity Low_complexity 1 21 0 3812 162 41 83 chr2 120980412 120981092 -132275491 + L1PB4 LINE L1 5154 5779 -377 282 116 0 0 chr2 120981092 120981135 -132275448 + (CA)n Simple_repeat Simple_repeat 2 44 0 3812 162 41 83 chr2 120981135 120981497 -132275086 + L1PB4 LINE L1 5779 6155 -1 24 32 0 0 chr2 120981497 120981528 -132275055 + AT_rich Low_complexity Low_complexity 1 31 0 3804 87 5 89 chr2 120982653 120983319 -132273264 + LTR66 LTR ERVL 1 610 0 12937 91 19 6 chr2 120983319 120985081 -132271502 + HERVL66 LTR ERVL 1 1786 -2543 4847 133 4 1 chr2 120985071 120985768 -132270815 + HERVL66 LTR ERVL 2654 3352 -977 * 3859 103 4 7 chr2 120985757 120986439 -132270144 + HERVL66 LTR ERVL 3565 4328 -1 * 3598 92 6 118 chr2 120986440 120987126 -132269457 + LTR66 LTR ERVL 1 609 -1 440 95 0 0 chr2 120987154 120987217 -132269366 + L1MA9 LINE L1 6192 6254 -58 1510 185 0 56 chr2 120987320 120987432 -132269151 + AluJb SINE Alu 1 118 -194 1557 177 171 8 chr2 120987432 120987800 -132268783 - MSTA LTR MaLR 0 428 1 9233 146 13 26 chr2 120987800 120989398 -132267185 - MSTA-int LTR MaLR 0 1580 3 1512 145 160 74 chr2 120989400 120989794 -132266789 - MSTA LTR MaLR 0 428 1 1510 185 0 56 chr2 120989794 120989980 -132266603 + AluJb SINE Alu 118 286 -26 21 0 0 0 chr2 120990585 120990606 -132265977 + AT_rich Low_complexity Low_complexity 1 21 0 333 350 99 11 chr2 120990868 120991131 -132265452 - MLT1J2 LTR MaLR -162 288 3 27 29 0 0 chr2 120991174 120991208 -132265375 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr2 120991366 120991387 -132265196 + AT_rich Low_complexity Low_complexity 1 21 0 29 28 0 0 chr2 120991537 120991573 -132265010 + AT_rich Low_complexity Low_complexity 1 36 0 425 292 67 38 chr2 120991588 120991855 -132264728 + L1ME3A LINE L1 5847 6121 -49 23 33 0 0 chr2 120991873 120991903 -132264680 + AT_rich Low_complexity Low_complexity 1 30 0 321 270 31 31 chr2 120992534 120992693 -132263890 + GA-rich Low_complexity Low_complexity 4 162 0 2140 98 3 76 chr2 120993044 120993372 -132263211 - AluSq SINE Alu -7 306 3 4047 168 17 6 chr2 120993479 120994182 -132262401 + MER50 LTR ERV1 1 711 -23 2598 201 38 6 chr2 120994400 120994933 -132261650 - MER44D DNA MER2_type 0 605 1 220 343 114 19 chr2 120995480 120995585 -132260998 - L3 LINE CR1 -89 1488 1374 334 293 61 25 chr2 120996401 120996599 -132259984 + MER102b DNA MER1_type 135 339 -2 246 324 0 0 chr2 120996685 120996759 -132259824 + MIR3 SINE MIR 114 187 -21 455 327 41 38 chr2 120996940 120997279 -132259304 - MER102b DNA MER1_type 0 341 2 765 239 12 0 chr2 120997397 120997560 -132259023 + MER5A DNA MER1_type 20 184 -5 345 224 167 39 chr2 120997588 120997744 -132258839 - MER5B DNA MER1_type -2 176 1 259 321 139 24 chr2 120998479 120998644 -132257939 - MIR SINE MIR 0 262 79 290 182 15 0 chr2 120998700 120998766 -132257817 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 35 0 0 0 chr2 120998907 120998942 -132257641 + AT_rich Low_complexity Low_complexity 1 35 0 24 77 0 0 chr2 120999035 120999087 -132257496 + AT_rich Low_complexity Low_complexity 1 52 0 306 0 0 0 chr2 120999718 120999752 -132256831 + (GA)n Simple_repeat Simple_repeat 1 34 0 234 206 16 63 chr2 120999896 121000022 -132256561 + A-rich Low_complexity Low_complexity 2 121 0 10949 207 22 15 chr2 121000158 121002800 -132253783 + L1 LINE L1 2584 5242 -904 1291 231 36 13 chr2 121002818 121003204 -132253379 - L1M4 LINE L1 -1348 4798 4404 27 29 0 0 chr2 121004696 121004730 -132251853 + AT_rich Low_complexity Low_complexity 1 34 0 230 320 78 66 chr2 121005668 121005912 -132250671 + HAL1 LINE L1 222 468 -2039 269 248 120 64 chr2 121005982 121006107 -132250476 + HAL1 LINE L1 480 611 -1896 719 303 125 35 chr2 121006346 121007088 -132249495 + HAL1 LINE L1 1699 2507 0 2201 121 0 0 chr2 121007233 121007546 -132249037 - AluSq SINE Alu 0 313 1 335 287 98 8 chr2 121007547 121007669 -132248914 + MIR SINE MIR 94 226 -36 264 30 0 0 chr2 121007791 121007824 -132248759 + (TC)n Simple_repeat Simple_repeat 2 34 0 * 381 43 0 0 chr2 121007823 121007870 -132248713 + (TA)n Simple_repeat Simple_repeat 2 48 0 794 233 9 45 chr2 121007877 121008100 -132248483 - MER20 DNA MER1_type -4 215 1 22 0 0 0 chr2 121009324 121009346 -132247237 + AT_rich Low_complexity Low_complexity 1 22 0 382 305 62 42 chr2 121009897 121010401 -132246182 - L1MC4 LINE L1 -555 7487 6981 333 155 0 0 chr2 121010420 121010478 -132246105 + CT-rich Low_complexity Low_complexity 3 60 0 2104 227 30 33 chr2 121010598 121011259 -132245324 + L1M4 LINE L1 4404 5062 -1084 23 0 0 0 chr2 121012561 121012584 -132243999 + AT_rich Low_complexity Low_complexity 1 23 0 360 230 65 91 chr2 121013254 121013484 -132243099 - L1ME LINE L1 -335 5786 5563 2145 30 52 0 chr2 121014056 121014325 -132242258 - L1PA4 LINE L1 -2 6153 5871 1362 19 0 0 chr2 121014325 121014483 -132242100 + L1PA4 LINE L1 5720 5877 -277 292 238 85 30 chr2 121014497 121014661 -132241922 - L1ME LINE L1 -2381 5427 5255 1503 152 108 19 chr2 121019555 121019870 -132236713 + MER61A LTR ERV1 1 343 0 2118 207 43 19 chr2 121019870 121020406 -132236177 + MER61A-int LTR ERV1 1 549 -4668 22340 108 24 9 chr2 121020491 121024234 -132232349 + MER61A-int LTR ERV1 1320 5217 0 1531 156 112 19 chr2 121024234 121024548 -132232035 + MER61A LTR ERV1 1 343 0 185 392 0 0 chr2 121025209 121025283 -132231300 - MIR SINE MIR -115 147 74 * 222 283 0 17 chr2 121025278 121025338 -132231245 - MIR SINE MIR 0 262 204 396 0 0 0 chr2 121025357 121025401 -132231182 + (TG)n Simple_repeat Simple_repeat 2 45 0 416 315 52 56 chr2 121026590 121026803 -132229780 + MIR SINE MIR 1 212 -50 506 333 15 10 chr2 121027745 121027943 -132228640 + MIR SINE MIR 7 205 -57 1105 52 0 0 chr2 121028231 121028365 -132228218 + AluY SINE Alu 160 293 -18 338 271 93 0 chr2 121028380 121028498 -132228085 - MIR SINE MIR -100 162 34 1410 215 22 41 chr2 121028890 121029326 -132227257 + MLT2B2 LTR ERVL 8 481 -34 231 328 60 17 chr2 121029355 121029471 -132227112 - MIR SINE MIR -77 185 65 27 0 0 0 chr2 121029471 121029498 -132227085 + AT_rich Low_complexity Low_complexity 1 27 0 2113 221 47 21 chr2 121029557 121030072 -132226511 - MER50 LTR ERV1 0 734 207 796 218 38 35 chr2 121030089 121030350 -132226233 - AluSq SINE Alu -25 288 27 277 75 25 0 chr2 121030571 121030611 -132225972 - AluSq SINE Alu -259 41 1 * 1157 158 51 5 chr2 121030611 121030824 -132225759 - MER50 LTR ERV1 -511 223 1 221 361 49 49 chr2 121030860 121031004 -132225579 + MIR3 SINE MIR 4 147 -61 246 206 48 32 chr2 121031349 121031412 -132225171 - MIR SINE MIR -98 110 47 362 21 21 0 chr2 121032292 121032339 -132224244 + (CA)n Simple_repeat Simple_repeat 1 48 0 521 229 172 59 chr2 121032855 121033347 -132223236 + LTR48 LTR ERV1 7 642 -2 21 0 0 0 chr2 121033518 121033539 -132223044 + AT_rich Low_complexity Low_complexity 1 21 0 2056 274 88 7 chr2 121036381 121037053 -132219530 + L1ME3 LINE L1 5400 6125 -37 2014 179 18 48 chr2 121037359 121037799 -132218784 - MSTC LTR MaLR 0 428 2 22 0 0 0 chr2 121037992 121038014 -132218569 + AT_rich Low_complexity Low_complexity 1 22 0 383 265 65 35 chr2 121038872 121039072 -132217511 + L2 LINE L2 3028 3233 -80 1069 189 20 10 chr2 121039177 121039378 -132217205 - MER20 DNA MER1_type 0 219 17 1058 103 0 0 chr2 121039903 121040049 -132216534 + AluY SINE Alu 154 299 -12 768 327 72 9 chr2 121040057 121040403 -132216180 + LTR33 LTR ERVL 100 467 -54 409 236 96 82 chr2 121040595 121040815 -132215768 - L1MC4 LINE L1 -191 7851 7629 257 307 22 44 chr2 121041248 121041385 -132215198 - MER117 DNA MER1_type -28 169 36 2108 119 0 7 chr2 121041890 121042183 -132214400 + AluSx SINE Alu 1 291 -21 225 0 0 0 chr2 121042400 121042425 -132214158 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 238 117 39 26 chr2 121042766 121042843 -132213740 + (TA)n Simple_repeat Simple_repeat 1 78 0 186 43 0 0 chr2 121043163 121043186 -132213397 + (TA)n Simple_repeat Simple_repeat 2 24 0 219 289 0 0 chr2 121043498 121043550 -132213033 + CT-rich Low_complexity Low_complexity 3 54 0 755 224 53 137 chr2 121043653 121044010 -132212573 - MER58B DNA MER1_type -14 327 1 423 266 47 116 chr2 121044015 121044178 -132212405 + MIR SINE MIR 46 190 -72 2204 86 0 0 chr2 121044178 121044457 -132212126 + AluSc SINE Alu 9 287 -22 423 266 47 116 chr2 121044457 121044526 -132212057 + MIR SINE MIR 190 262 0 2195 101 0 3 chr2 121044662 121044958 -132211625 + AluY SINE Alu 1 295 -16 2466 167 15 30 chr2 121045229 121045645 -132210938 + MER65C LTR ERV1 1 411 -50 532 237 23 15 chr2 121045645 121045776 -132210807 - FLAM_A SINE Alu -1 132 1 2466 167 15 30 chr2 121045776 121045827 -132210756 + MER65C LTR ERV1 411 461 0 285 154 0 58 chr2 121046277 121046329 -132210254 + LTR33-int LTR ERVL 303 351 -4992 742 253 53 17 chr2 121046617 121046928 -132209655 + MER34 LTR ERV1 34 380 -162 2667 229 81 13 chr2 121046928 121047793 -132208790 + MER65C-int LTR ERV1 1570 2493 -2378 25 31 0 0 chr2 121047879 121047911 -132208672 + AT_rich Low_complexity Low_complexity 1 32 0 499 305 30 15 chr2 121047962 121048165 -132208418 + MER65C-int LTR ERV1 2364 2569 -2554 1704 209 109 80 chr2 121048381 121049918 -132206665 + MER65C-int LTR ERV1 3499 5103 -1228 264 200 0 94 chr2 121049918 121050003 -132206580 + MER65C-int LTR ERV1 5459 5535 -728 1080 248 34 85 chr2 121050089 121050604 -132205979 + MER65C-int LTR ERV1 3608 4173 -698 828 296 72 30 chr2 121050669 121051169 -132205414 + MER65C-int LTR ERV1 4351 4871 0 2135 193 31 20 chr2 121051169 121051625 -132204958 + MER65C LTR ERV1 1 461 0 26 50 0 0 chr2 121051899 121051939 -132204644 + AT_rich Low_complexity Low_complexity 1 40 0 346 320 0 0 chr2 121052454 121052551 -132204032 - MER5A DNA MER1_type -91 98 2 23 33 0 0 chr2 121053331 121053361 -132203222 + AT_rich Low_complexity Low_complexity 1 30 0 806 211 80 50 chr2 121054943 121054989 -132201594 + MER63A DNA MER1_type 1 44 -1644 2199 115 3 0 chr2 121054989 121055293 -132201290 + AluSg1 SINE Alu 1 305 -4 806 211 80 50 chr2 121055293 121055445 -132201138 + MER63A DNA MER1_type 44 205 -5 200 291 18 0 chr2 121056604 121056659 -132199924 - MIR SINE MIR -80 128 73 820 261 187 43 chr2 121056694 121057154 -132199429 + MLT1H1 LTR MaLR 16 541 -14 1521 246 62 14 chr2 121057382 121057805 -132198778 + LTR40b LTR ERVL 20 462 0 21 0 0 0 chr2 121057977 121057998 -132198585 + AT_rich Low_complexity Low_complexity 1 21 0 452 330 32 37 chr2 121059834 121060022 -132196561 - MIR3 SINE MIR -18 190 4 651 297 58 66 chr2 121061643 121061719 -132194864 + MLT1I LTR MaLR 2 77 -332 2512 68 0 0 chr2 121061719 121062028 -132194555 + AluY SINE Alu 1 309 -2 651 297 58 66 chr2 121062028 121062298 -132194285 + MLT1I LTR MaLR 77 345 -64 455 307 209 0 chr2 121062655 121062870 -132193713 - MIR SINE MIR -2 260 1 180 0 0 0 chr2 121063205 121063225 -132193358 + (CA)n Simple_repeat Simple_repeat 1 20 0 907 282 43 23 chr2 121063449 121063797 -132192786 + L1ME LINE L1 273 627 -5443 1481 293 16 96 chr2 121063798 121064835 -132191748 + L1ME LINE L1 2292 3246 -2834 2697 141 10 50 chr2 121064835 121065316 -132191267 + MER4C LTR ERV1 1 462 -3 1798 165 26 0 chr2 121065327 121065630 -132190953 - AluSx SINE Alu -1 311 1 427 325 48 0 chr2 121065651 121065860 -132190723 + L1ME LINE L1 3243 3461 -2619 566 216 0 0 chr2 121066031 121066133 -132190450 + AluJ/FLAM SINE Alu 1 102 -210 432 0 0 0 chr2 121066144 121066192 -132190391 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 21 0 0 0 chr2 121066791 121066812 -132189771 + AT_rich Low_complexity Low_complexity 1 21 0 1272 227 20 35 chr2 121067181 121067524 -132189059 + L1ME LINE L1 5485 5822 -344 1730 157 83 21 chr2 121067524 121067862 -132188721 - THE1B LTR MaLR -3 361 3 8631 116 9 2 chr2 121067864 121069083 -132187500 - THE1B-int LTR MaLR 0 1580 354 1574 115 79 4 chr2 121069089 121069342 -132187241 - L1P5 LINE L1 -361 5790 5519 943 78 0 0 chr2 121069345 121069461 -132187122 - AluSq/x SINE Alu -164 149 34 257 62 0 0 chr2 121069512 121069544 -132187039 + THE1B LTR MaLR 1 32 -332 3228 109 13 71 chr2 121069890 121070496 -132186087 - L1PB1 LINE L1 -323 5828 5258 262 73 98 0 chr2 121070479 121070520 -132186063 - L1PA8A LINE L1 -411 5720 5676 * 1173 165 25 12 chr2 121070522 121070765 -132185818 - L1PBa LINE L1 -4970 1893 1648 625 285 24 0 chr2 121070745 121070952 -132185631 - L1PBa LINE L1 -6646 217 6 * 2415 145 76 15 chr2 121070970 121071513 -132185070 + MER4E LTR ERV1 27 766 0 397 328 66 8 chr2 121072081 121072203 -132184380 + MIR3 SINE MIR 5 133 -75 193 286 118 42 chr2 121072199 121072318 -132184265 - L2 LINE L2 -2 3270 3143 * 4414 27 0 0 chr2 121072648 121073184 -132183399 + L1PA3 LINE L1 5624 6159 0 199 0 0 0 chr2 121073162 121073240 -132183343 + (TAA)n Simple_repeat Simple_repeat 3 80 0 1061 158 98 0 chr2 121073356 121073540 -132183043 - LTR28 LTR ERV1 -509 511 310 343 395 43 0 chr2 121076214 121076376 -132180207 - L2 LINE L2 0 3272 3104 279 0 0 0 chr2 121076482 121076513 -132180070 + (TG)n Simple_repeat Simple_repeat 2 32 0 751 302 24 31 chr2 121078370 121078625 -132177958 - MIR SINE MIR 0 262 10 2132 124 3 3 chr2 121079037 121079343 -132177240 + AluSg SINE Alu 1 306 -4 186 103 0 0 chr2 121079902 121079931 -132176652 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 198 361 42 0 chr2 121081343 121081415 -132175168 + MIR SINE MIR 109 183 -79 254 210 32 0 chr2 121081416 121081478 -132175105 + (TATATG)n Simple_repeat Simple_repeat 4 67 0 368 211 0 35 chr2 121082388 121082530 -132174053 + GA-rich Low_complexity Low_complexity 4 140 0 850 217 6 29 chr2 121086413 121086588 -132169995 - AluJo SINE Alu -55 257 87 1211 186 32 0 chr2 121086652 121086932 -132169651 - L1MA4 LINE L1 -11 6289 6001 323 176 0 0 chr2 121087022 121087073 -132169510 - MLT2C2 LTR ERVL 0 464 414 229 173 77 0 chr2 121087084 121087136 -132169447 + L1MC4 LINE L1 6648 6703 -1339 1702 219 52 96 chr2 121087184 121087734 -132168849 - MLT2B3 LTR ERVL -40 504 1 2118 169 37 39 chr2 121087871 121088304 -132168279 - MSTB1 LTR MaLR 0 432 1 422 269 9 9 chr2 121088483 121088591 -132167992 + LTR40b LTR ERVL 354 461 -1 1126 230 8 103 chr2 121089213 121089592 -132166991 - L1M4 LINE L1 -6192 350 8 235 396 78 7 chr2 121089688 121089842 -132166741 - L2 LINE L2 -1 3271 3107 342 0 0 0 chr2 121089925 121089963 -132166620 + (TG)n Simple_repeat Simple_repeat 2 39 0 664 289 78 9 chr2 121090042 121090260 -132166323 + MIR SINE MIR 2 234 -28 7467 26 4 2 chr2 121090628 121091541 -132165042 + L1PA4 LINE L1 5233 6155 0 1721 166 28 11 chr2 121093404 121093838 -132162745 - L1MA9 LINE L1 0 6312 5786 242 260 21 10 chr2 121093840 121093936 -132162647 + (TAAA)n Simple_repeat Simple_repeat 3 99 0 3590 201 47 18 chr2 121094036 121095174 -132161409 - L1MA9 LINE L1 -523 5789 4603 2107 95 42 0 chr2 121095174 121095457 -132161126 - AluY SINE Alu -16 295 1 3590 201 47 18 chr2 121095457 121095640 -132160943 - L1MA9 LINE L1 -1709 4603 4427 1339 209 50 3 chr2 121095637 121095977 -132160606 - L1MA9 LINE L1 -1924 4222 3867 * 246 109 22 0 chr2 121095979 121096025 -132160558 + LTR66 LTR ERVL 394 440 -170 330 159 0 0 chr2 121096028 121096097 -132160486 + (TA)n Simple_repeat Simple_repeat 2 70 0 368 188 12 12 chr2 121096205 121096365 -132160218 + (TA)n Simple_repeat Simple_repeat 1 160 0 196 313 111 10 chr2 121096368 121096467 -132160116 + L2 LINE L2 3200 3308 -5 2803 70 3 0 chr2 121097011 121097385 -132159198 + L1PA4 LINE L1 5781 6155 0 2942 222 70 56 chr2 121097566 121098516 -132158067 - L1MB7 LINE L1 0 6184 5212 827 351 32 11 chr2 121098602 121098881 -132157702 - L1M4b LINE L1 -6286 573 289 304 229 0 0 chr2 121098882 121098952 -132157631 - MLT1B LTR MaLR -127 263 194 513 273 61 30 chr2 121099011 121099176 -132157407 - L1M4b LINE L1 -6688 171 2 332 183 56 14 chr2 121099508 121099579 -132157004 - Tigger2a DNA MER2_type -346 88 15 486 0 0 0 chr2 121099583 121099637 -132156946 + (TAGA)n Simple_repeat Simple_repeat 3 56 0 260 354 0 0 chr2 121100060 121100139 -132156444 + L2 LINE L2 3186 3264 -8 362 220 53 0 chr2 121100174 121100306 -132156277 + (TA)n Simple_repeat Simple_repeat 2 140 0 32 0 0 0 chr2 121100477 121100509 -132156074 + AT_rich Low_complexity Low_complexity 1 32 0 1274 204 14 0 chr2 121100516 121100737 -132155846 + MER8 DNA MER2_type 2 225 -14 444 37 0 0 chr2 121100741 121100795 -132155788 + (TAGA)n Simple_repeat Simple_repeat 3 56 0 549 279 35 0 chr2 121101983 121102155 -132154428 - L1ME1 LINE L1 -6 6160 5983 464 184 3 73 chr2 121102759 121103214 -132153369 + (CATA)n Simple_repeat Simple_repeat 1 423 0 338 104 39 66 chr2 121103217 121103399 -132153184 + (CATATA)n Simple_repeat Simple_repeat 4 180 0 539 73 87 0 chr2 121103472 121103622 -132152961 + (TA)n Simple_repeat Simple_repeat 1 163 0 2077 133 0 0 chr2 121103671 121103965 -132152618 - AluSx SINE Alu -16 296 3 524 318 113 38 chr2 121104278 121104677 -132151906 - L2 LINE L2 -4 3309 2881 315 278 91 11 chr2 121104869 121105045 -132151538 - L1ME1 LINE L1 -281 5840 5651 527 182 21 25 chr2 121105489 121105750 -132150833 + GA-rich Low_complexity Low_complexity 1 260 0 4746 163 130 18 chr2 121107183 121108099 -132148484 + LTR28 LTR ERV1 2 1020 0 223 321 35 11 chr2 121108107 121108202 -132148381 - MER5A DNA MER1_type -62 116 25 2026 137 50 36 chr2 121108535 121108611 -132147972 - THE1B LTR MaLR 0 364 291 2227 74 23 23 chr2 121108611 121108910 -132147673 + AluY SINE Alu 1 299 -12 2026 137 50 36 chr2 121108910 121109192 -132147391 - THE1B LTR MaLR -73 291 1 338 288 9 27 chr2 121109793 121109904 -132146679 + CT-rich Low_complexity Low_complexity 4 112 0 1694 131 69 48 chr2 121109987 121110277 -132146306 - AluSx SINE Alu -16 296 1 21 82 0 0 chr2 121110633 121110682 -132145901 + AT_rich Low_complexity Low_complexity 1 49 0 1004 302 57 11 chr2 121111362 121111822 -132144761 + L1ME3 LINE L1 3217 3697 -2449 1303 174 11 41 chr2 121111838 121112108 -132144475 + AluJo SINE Alu 35 296 -16 458 33 17 0 chr2 121112113 121112173 -132144410 + (GA)n Simple_repeat Simple_repeat 1 61 0 1660 306 109 23 chr2 121112173 121113870 -132142713 + L1ME3 LINE L1 3685 5525 -637 1061 280 34 25 chr2 121113924 121114395 -132142188 + L1ME3 LINE L1 5657 6131 -31 877 315 93 17 chr2 121115388 121116528 -132140055 + L1ME3 LINE L1 4302 5525 -639 877 287 40 30 chr2 121116585 121117013 -132139570 + L1ME3 LINE L1 5660 6091 -71 367 327 10 10 chr2 121118384 121118485 -132138098 + MER5B DNA MER1_type 57 157 -21 537 240 16 0 chr2 121118489 121118610 -132137973 - MER5B DNA MER1_type -53 125 3 1559 188 55 36 chr2 121118801 121118997 -132137586 + MLT1A2 LTR MaLR 7 215 -159 198 0 0 0 chr2 121118997 121119019 -132137564 + (CAA)n Simple_repeat Simple_repeat 3 24 0 1559 188 55 36 chr2 121119019 121119183 -132137400 + MLT1A2 LTR MaLR 215 374 0 991 285 174 38 chr2 121119896 121120681 -132135902 - HAL1 LINE L1 -2 2505 1614 471 311 31 33 chr2 121120665 121120920 -132135663 + L1PA13 LINE L1 1081 1467 -5320 * 350 243 83 42 chr2 121120936 121121080 -132135503 - HAL1 LINE L1 -898 1609 1460 1758 188 3 0 chr2 121121110 121121418 -132135165 - AluJb SINE Alu -3 309 1 294 208 0 0 chr2 121121604 121121652 -132134931 - AluJ/monomer SINE Alu -252 48 1 475 204 121 24 chr2 121121668 121121874 -132134709 + L1ME2 LINE L1 4482 4707 -1439 1697 211 36 12 chr2 121121879 121122215 -132134368 + L1PA13 LINE L1 2 345 -6442 1532 316 144 7 chr2 121122224 121122816 -132133767 + L1PA13 LINE L1 586 1258 -5529 2446 188 0 0 chr2 121122819 121123255 -132133328 + L1PA13 LINE L1 1396 1831 -4956 13559 186 28 12 chr2 121123263 121123917 -132132666 + L1PA13 LINE L1 3151 3793 -3021 216 0 0 0 chr2 121123917 121123941 -132132642 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 13559 186 28 12 chr2 121123941 121126229 -132130354 + L1PA13 LINE L1 3793 6160 -654 1772 156 14 7 chr2 121126229 121126518 -132130065 + AluSc SINE Alu 1 291 -18 13559 186 28 12 chr2 121126518 121127184 -132129399 + L1PA13 LINE L1 6160 6814 0 2379 242 72 12 chr2 121127186 121128463 -132128120 + L1ME2 LINE L1 4694 6048 -116 266 149 122 27 chr2 121128460 121128534 -132128049 - L1MC4 LINE L1 -1317 6725 6645 * 333 221 93 0 chr2 121129234 121129320 -132127263 - L1MC4 LINE L1 -1338 6704 6611 21 36 0 0 chr2 121131328 121131356 -132125227 + AT_rich Low_complexity Low_complexity 1 28 0 3318 46 0 2 chr2 121132287 121132698 -132123885 - L1PA3 LINE L1 -3 6152 5743 23 108 0 0 chr2 121133129 121133222 -132123361 + AT_rich Low_complexity Low_complexity 1 93 0 553 229 71 75 chr2 121133277 121133544 -132123039 + HsTC2 DNA Tc2 1248 1689 -209 210 246 0 58 chr2 121133620 121133689 -132122894 - MIR SINE MIR -3 259 195 2384 322 80 26 chr2 121133985 121135496 -132121087 - L2 LINE L2 -10 3303 1713 20895 135 17 6 chr2 121135580 121139827 -132116756 - L1PA8A LINE L1 -5 6441 2158 7456 25 9 0 chr2 121139845 121140728 -132115855 - L1PA3 LINE L1 -3 6152 5262 7887 171 7 18 chr2 121140729 121141628 -132114955 - L1PA8A LINE L1 -4296 2165 1257 183 100 0 0 chr2 121141628 121141658 -132114925 + (TTG)n Simple_repeat Simple_repeat 1 30 0 7887 171 7 18 chr2 121141658 121142822 -132113761 - L1PA8A LINE L1 -5204 1257 66 477 157 0 36 chr2 121142844 121142927 -132113656 - L1PA8A LINE L1 -5793 82 3 25 0 0 0 chr2 121143004 121143029 -132113554 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr2 121144398 121144421 -132112162 + AT_rich Low_complexity Low_complexity 1 23 0 261 42 42 21 chr2 121145542 121145590 -132110993 + (GAAA)n Simple_repeat Simple_repeat 4 52 0 1585 257 119 16 chr2 121145656 121146142 -132110441 - REP3 LTR ERV -18 544 9 225 298 0 85 chr2 121146244 121146338 -132110245 - L2 LINE L2 -1 3271 3186 25 0 0 0 chr2 121149263 121149288 -132107295 + AT_rich Low_complexity Low_complexity 1 25 0 2786 152 58 19 chr2 121149595 121150074 -132106509 - MLT2B2 LTR ERVL 0 515 18 182 130 22 43 chr2 121150115 121150161 -132106422 + L2 LINE L2 2224 2268 -1046 256 333 7 14 chr2 121150899 121151046 -132105537 - HAL1b LINE L1 -7 1341 1196 186 103 0 0 chr2 121151078 121151107 -132105476 + (CA)n Simple_repeat Simple_repeat 2 30 0 425 175 0 12 chr2 121151148 121151228 -132105355 - LTR40a LTR ERVL -12 507 429 1474 284 37 27 chr2 121151684 121152195 -132104388 - LTR40a LTR ERVL -3 516 1 887 173 0 0 chr2 121152740 121152873 -132103710 + FLAM_A SINE Alu 1 133 0 2245 100 3 3 chr2 121152890 121153199 -132103384 + AluSp SINE Alu 3 311 -2 2129 145 94 12 chr2 121153206 121153633 -132102950 + L1MB4 LINE L1 5679 6140 -40 360 287 0 9 chr2 121153738 121153853 -132102730 + L1M4 LINE L1 2651 2764 -3382 1660 178 18 0 chr2 121154359 121154635 -132101948 + AluJo SINE Alu 1 281 -31 1813 84 8 12 chr2 121154674 121154924 -132101659 + AluSc SINE Alu 30 278 -31 405 0 0 0 chr2 121154928 121154973 -132101610 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 1937 93 10 21 chr2 121155897 121156187 -132100396 - AluY SINE Alu -24 287 1 427 147 0 39 chr2 121156192 121156294 -132100289 + Tigger1 DNA MER2_type 2210 2307 -111 577 206 12 91 chr2 121156297 121156462 -132100121 - FRAM SINE Alu -13 163 12 1757 100 25 0 chr2 121157982 121158222 -132098361 + AluSq SINE Alu 1 246 -67 254 281 47 0 chr2 121159644 121159708 -132096875 + MER110 LTR ERV1 425 491 0 453 289 175 6 chr2 121159823 121159989 -132096594 - MIR SINE MIR -63 199 6 1398 261 114 14 chr2 121160054 121160544 -132096039 - LTR26 LTR ERV1 0 603 65 266 329 49 12 chr2 121160913 121161077 -132095506 + L1ME2 LINE L1 5419 5588 -578 * 1893 131 40 0 chr2 121161072 121161370 -132095213 - L1P3 LINE L1 -1513 4633 4324 * 4285 97 26 37 chr2 121161367 121161496 -132095087 + L1P3 LINE L1 4653 4782 -1390 276 100 0 0 chr2 121161496 121161536 -132095047 + (TA)n Simple_repeat Simple_repeat 2 41 0 4285 97 26 37 chr2 121161536 121162494 -132094089 + L1P3 LINE L1 4782 5731 -441 4156 95 0 0 chr2 121162539 121163106 -132093477 + L1PA8 LINE L1 5589 6155 -17 1416 231 22 63 chr2 121163128 121163622 -132092961 + L1ME2 LINE L1 5583 6056 -110 329 248 77 26 chr2 121163623 121163740 -132092843 - L1MC4 LINE L1 -1305 6737 6615 489 162 0 0 chr2 121163888 121163999 -132092584 + (TA)n Simple_repeat Simple_repeat 1 111 0 414 0 0 0 chr2 121164013 121164059 -132092524 + (TG)n Simple_repeat Simple_repeat 2 47 0 4973 165 50 16 chr2 121164812 121165851 -132090732 - L1MA7 LINE L1 0 6291 5219 9925 195 32 13 chr2 121166033 121169369 -132087214 - L1PA15 LINE L1 -6 6810 3280 389 247 0 0 chr2 121169385 121169466 -132087117 - L1PA15 LINE L1 -6666 121 41 239 378 47 25 chr2 121170179 121170457 -132086126 + L2 LINE L2 2504 2787 -527 258 366 130 14 chr2 121170522 121170738 -132085845 + L2 LINE L2 3032 3272 0 50 51 0 0 chr2 121170811 121170889 -132085694 + AT_rich Low_complexity Low_complexity 1 78 0 327 224 59 12 chr2 121171119 121171204 -132085379 + L1MC4 LINE L1 6622 6710 -1332 199 0 65 0 chr2 121171206 121171237 -132085346 + (TA)n Simple_repeat Simple_repeat 2 34 0 364 327 77 15 chr2 121171476 121171748 -132084835 - L1ME LINE L1 -343 5778 5490 200 222 74 37 chr2 121173153 121173207 -132083376 - L2 LINE L2 -8 3305 3250 15544 138 35 21 chr2 121173431 121176110 -132080473 + L1PBa LINE L1 1 2718 -4145 11311 118 1 20 chr2 121176106 121177844 -132078739 + L1PB1 LINE L1 450 2154 -3992 * 7744 56 14 8 chr2 121177841 121179649 -132076934 + L1PA6 LINE L1 4327 6144 -10 * 3021 154 38 37 chr2 121179668 121180631 -132075952 + L1PB1 LINE L1 4838 5791 -360 208 154 39 0 chr2 121180633 121180685 -132075898 + (TATATG)n Simple_repeat Simple_repeat 1 54 0 2622 97 3 0 chr2 121180685 121181047 -132075536 + L1PB1 LINE L1 5784 6146 -5 2150 195 224 91 chr2 121181165 121182063 -132074520 + LTR28 LTR ERV1 4 1020 0 4550 17 0 0 chr2 121183424 121183974 -132072609 + L1PA3 LINE L1 5623 6172 0 21 0 0 0 chr2 121185249 121185270 -132071313 + AT_rich Low_complexity Low_complexity 1 21 0 613 211 23 0 chr2 121185270 121185398 -132071185 - FLAM_C SINE Alu -2 131 1 190 320 67 0 chr2 121185414 121185489 -132071094 - MER5A DNA MER1_type -63 126 47 258 286 79 40 chr2 121186048 121186174 -132070409 + MIR SINE MIR 22 152 -110 2439 191 56 26 chr2 121187629 121188126 -132068457 + MLT2B2 LTR ERVL 2 513 -2 2951 216 109 34 chr2 121188327 121189103 -132067480 - MER21B LTR ERV1 -23 840 6 419 268 167 36 chr2 121189771 121189939 -132066644 + L2 LINE L2 3108 3297 -16 373 297 10 56 chr2 121190039 121190234 -132066349 + L2 LINE L2 3096 3281 -32 3894 214 41 24 chr2 121190426 121191580 -132065003 + L1MD1 LINE L1 5069 6236 -6 1676 126 24 0 chr2 121192090 121192336 -132064247 + AluSq SINE Alu 61 312 -1 1858 134 12 25 chr2 121192337 121192587 -132063996 + L1PA12 LINE L1 5432 5679 -495 1940 169 0 0 chr2 121192587 121192882 -132063701 + AluSx SINE Alu 1 295 -17 1858 134 12 25 chr2 121192882 121192952 -132063631 + L1PA12 LINE L1 5679 5748 -426 1064 164 43 26 chr2 121192943 121193175 -132063408 - L1P LINE L1 -1257 4889 4654 * 2468 144 17 0 chr2 121193185 121193594 -132062989 + L1PA12 LINE L1 5753 6168 0 1245 258 125 18 chr2 121193604 121194268 -132062315 + L1M4 LINE L1 4247 4981 -1165 10712 167 34 5 chr2 121194372 121196473 -132060110 - L1P LINE L1 -734 5429 3282 338 354 46 6 chr2 121196885 121197060 -132059523 - MIR SINE MIR -26 236 55 30 27 0 0 chr2 121198923 121198960 -132057623 + AT_rich Low_complexity Low_complexity 1 37 0 364 256 40 34 chr2 121200060 121200236 -132056347 - MER104 DNA Tc2 -3 177 1 1320 198 13 113 chr2 121200671 121201141 -132055442 + L1ME LINE L1 4902 5324 -822 2274 150 49 5 chr2 121201141 121201545 -132055038 + L1PB4 LINE L1 5730 6154 -2 38253 79 12 9 chr2 121201566 121207732 -132048851 + L1PA6 LINE L1 11 6194 0 342 108 11 86 chr2 121207947 121208133 -132048450 + (TA)n Simple_repeat Simple_repeat 1 172 0 298 117 0 102 chr2 121208185 121208382 -132048201 + (TA)n Simple_repeat Simple_repeat 2 178 0 417 126 15 116 chr2 121208385 121208583 -132048000 + (CATATA)n Simple_repeat Simple_repeat 2 179 0 423 82 7 75 chr2 121208624 121208770 -132047813 + (TA)n Simple_repeat Simple_repeat 2 137 0 853 249 20 44 chr2 121208816 121209109 -132047474 + L1ME1 LINE L1 5837 6122 -44 467 239 29 7 chr2 121209010 121209148 -132047435 + L1MA10 LINE L1 6180 6320 -14 * 24 0 0 0 chr2 121209849 121209873 -132046710 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr2 121210934 121210957 -132045626 + AT_rich Low_complexity Low_complexity 1 23 0 1371 218 3 21 chr2 121211258 121211543 -132045040 + AluJo SINE Alu 3 282 -30 27 49 0 0 chr2 121213494 121213535 -132043048 + AT_rich Low_complexity Low_complexity 1 41 0 332 199 90 64 chr2 121213784 121213940 -132042643 + L1ME LINE L1 5338 5497 -665 1916 213 59 38 chr2 121214222 121214700 -132041883 - MLT1D LTR MaLR 0 505 18 206 356 27 40 chr2 121214747 121214896 -132041687 + MIR SINE MIR 6 152 -110 212 57 0 29 chr2 121216506 121216541 -132040042 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 201 176 0 0 chr2 121216860 121216894 -132039689 + A-rich Low_complexity Low_complexity 1 34 0 642 120 0 0 chr2 121216949 121217049 -132039534 + AluSg/x SINE Alu 213 312 0 739 300 46 54 chr2 121217543 121217893 -132038690 - L2 LINE L2 -4 3309 2963 302 0 26 0 chr2 121218007 121218045 -132038538 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1498 137 22 112 chr2 121218047 121218368 -132038215 - AluYb8 SINE Alu -26 292 1 21 0 0 0 chr2 121218410 121218431 -132038152 + AT_rich Low_complexity Low_complexity 1 21 0 807 58 48 0 chr2 121218553 121218657 -132037926 - L1PA7 LINE L1 -1 6153 6045 240 248 85 71 chr2 121219222 121219363 -132037220 - MIR SINE MIR -108 154 12 2656 186 47 31 chr2 121219382 121220154 -132036429 - LTR1 LTR ERV1 -1 784 1 473 151 16 24 chr2 121221263 121221389 -132035194 + CT-rich Low_complexity Low_complexity 4 128 0 894 137 0 28 chr2 121221389 121221571 -132035012 + (TTTC)n Simple_repeat Simple_repeat 4 180 0 966 89 6 19 chr2 121221689 121221847 -132034736 + (TTTC)n Simple_repeat Simple_repeat 3 158 0 1816 153 0 7 chr2 121221847 121222129 -132034454 - AluSx SINE Alu -32 280 1 2817 175 79 40 chr2 121222129 121222188 -132034395 + MER73 LTR ERVL 16 71 -573 2193 122 0 0 chr2 121222188 121222491 -132034092 + AluSq SINE Alu 1 303 -10 2817 175 79 40 chr2 121222491 121223036 -132033547 + MER73 LTR ERVL 71 644 0 387 0 0 0 chr2 121223042 121223085 -132033498 + (TG)n Simple_repeat Simple_repeat 2 44 0 575 295 80 5 chr2 121223087 121223311 -132033272 + LTR16A LTR ERVL 208 448 -2 371 289 71 98 chr2 121223408 121223674 -132032909 - L2 LINE L2 0 3272 3014 374 74 53 32 chr2 121224380 121224475 -132032108 + (TAGA)n Simple_repeat Simple_repeat 4 100 0 324 336 83 40 chr2 121225206 121225543 -132031040 + L1MC4a LINE L1 5326 5698 -2110 1731 142 10 30 chr2 121225543 121225845 -132030738 + AluJb SINE Alu 1 296 -16 324 336 83 40 chr2 121225845 121226064 -132030519 + L1MC4a LINE L1 5698 5906 -1902 272 235 24 24 chr2 121226314 121226399 -132030184 + (TATATG)n Simple_repeat Simple_repeat 5 89 0 24 32 0 0 chr2 121227628 121227659 -132028924 + AT_rich Low_complexity Low_complexity 1 31 0 2243 117 0 0 chr2 121227667 121227965 -132028618 + AluSx SINE Alu 3 300 -12 1290 241 142 12 chr2 121228066 121228497 -132028086 - MER97c DNA MER1_type? -522 568 82 228 310 35 0 chr2 121228525 121228612 -132027971 - MER97a DNA MER1_type? -800 94 5 292 264 17 92 chr2 121228795 121228969 -132027614 - MER117 DNA MER1_type -36 161 1 704 157 15 37 chr2 121229143 121229277 -132027306 + AluSx SINE Alu 40 170 -142 239 102 0 20 chr2 121229283 121229332 -132027251 + (CAAAAA)n Simple_repeat Simple_repeat 1 48 0 212 313 10 50 chr2 121229871 121229970 -132026613 - L2 LINE L2 -4 3268 3174 925 205 18 40 chr2 121230623 121230847 -132025736 + MER20 DNA MER1_type 1 219 0 181 263 0 25 chr2 121231227 121231307 -132025276 + A-rich Low_complexity Low_complexity 5 82 0 285 253 32 32 chr2 121231664 121231759 -132024824 + MIR SINE MIR 153 247 -15 1758 249 67 41 chr2 121231792 121232402 -132024181 + MLT1E2 LTR MaLR 1 626 0 640 271 128 30 chr2 121232474 121232803 -132023780 - MER57A LTR ERV1 0 403 74 2126 316 111 4 chr2 121232992 121233940 -132022643 + MER69 DNA AcHobo 1 1049 -1477 291 277 92 8 chr2 121234036 121234166 -132022417 + MER69 DNA AcHobo 1071 1211 -1315 25 65 0 0 chr2 121234216 121234262 -132022321 + AT_rich Low_complexity Low_complexity 1 46 0 369 136 0 30 chr2 121234501 121234567 -132022016 - AluJo SINE Alu 0 302 239 7819 149 85 40 chr2 121234571 121236193 -132020390 - pTR5 LTR ERV1 0 2438 743 805 232 0 0 chr2 121236193 121236348 -132020235 - AluJo SINE Alu -71 241 87 309 261 0 17 chr2 121236348 121236463 -132020120 + MER69 DNA AcHobo 2394 2506 -20 354 292 0 11 chr2 121236978 121237067 -132019516 + LTR28 LTR ERV1 929 1016 -4 253 298 161 16 chr2 121237081 121237205 -132019378 + L2 LINE L2 3168 3309 -4 287 216 128 65 chr2 121237467 121237620 -132018963 - L1ME LINE L1 -279 5842 5679 255 61 0 0 chr2 121237680 121237713 -132018870 + (CA)n Simple_repeat Simple_repeat 2 34 0 2127 226 10 30 chr2 121237949 121238444 -132018139 + MER74A LTR ERVL 74 558 0 214 240 40 0 chr2 121238720 121238770 -132017813 + L2 LINE L2 3262 3313 0 213 208 42 0 chr2 121239787 121239835 -132016748 + L2 LINE L2 3264 3313 0 32 57 0 0 chr2 121240194 121240247 -132016336 + AT_rich Low_complexity Low_complexity 1 53 0 399 127 0 0 chr2 121240296 121240359 -132016224 + (T)n Simple_repeat Simple_repeat 1 63 0 8784 212 49 28 chr2 121240466 121241517 -132015066 - L1PA12 LINE L1 -2931 4653 3625 2097 150 11 8 chr2 121241517 121241870 -132014713 + THE1A LTR MaLR 1 354 -1 11258 105 11 9 chr2 121241872 121243447 -132013136 + THE1A-int LTR MaLR 2 1580 0 2216 135 8 8 chr2 121243447 121243802 -132012781 + THE1A LTR MaLR 1 355 0 8784 212 49 28 chr2 121243802 121246484 -132010099 - L1PA12 LINE L1 -3958 3626 24 2013 103 3 3 chr2 121246506 121246812 -132009771 - AluY SINE Alu 0 306 1 3976 225 97 41 chr2 121246850 121246969 -132009614 - L1MDa LINE L1 -5200 1340 1229 2336 143 29 70 chr2 121246969 121247415 -132009168 - MSTA LTR MaLR 0 428 1 3976 225 97 41 chr2 121247415 121248319 -132008264 - L1MDa LINE L1 -5311 1229 236 207 0 0 0 chr2 121248319 121248342 -132008241 + (TTG)n Simple_repeat Simple_repeat 2 24 0 3976 225 97 41 chr2 121248342 121248539 -132008044 - L1MDa LINE L1 -6304 236 51 212 179 0 0 chr2 121248539 121248578 -132008005 + A-rich Low_complexity Low_complexity 1 39 0 488 75 21 32 chr2 121254444 121254537 -132002046 + (GAAA)n Simple_repeat Simple_repeat 4 95 0 22 0 0 0 chr2 121256215 121256237 -132000346 + AT_rich Low_complexity Low_complexity 1 22 0 423 321 67 67 chr2 121256316 121256674 -131999909 + MLT1I LTR MaLR 26 383 -26 23 33 0 0 chr2 121257036 121257066 -131999517 + AT_rich Low_complexity Low_complexity 1 30 0 438 221 144 0 chr2 121257925 121258029 -131998554 + Tigger1 DNA MER2_type 33 151 -2267 * 1200 158 5 23 chr2 121258025 121258246 -131998337 + Tigger1 DNA MER2_type 2202 2418 0 223 187 107 53 chr2 121258313 121258388 -131998195 + MIR SINE MIR 108 186 -76 269 306 14 0 chr2 121258451 121258523 -131998060 + L2 LINE L2 3184 3256 -16 412 300 79 18 chr2 121259166 121259393 -131997190 + L3b LINE CR1 1102 1342 -241 430 244 55 40 chr2 121259715 121259916 -131996667 + L1MB8 LINE L1 5174 5377 -769 1368 269 52 18 chr2 121259975 121260230 -131996353 + L1MB8 LINE L1 5616 5861 -317 718 280 33 9 chr2 121260230 121260441 -131996142 - MER20 DNA MER1_type -2 217 2 1368 269 52 18 chr2 121260441 121260728 -131995855 + L1MB8 LINE L1 5861 6176 -2 23 33 0 0 chr2 121260831 121260861 -131995722 + AT_rich Low_complexity Low_complexity 1 30 0 491 254 8 133 chr2 121260886 121261126 -131995457 + MER58C DNA MER1_type 5 214 -1 345 317 168 10 chr2 121261131 121261333 -131995250 + L1M2 LINE L1 2370 2603 -4246 1272 277 63 31 chr2 121261338 121261857 -131994726 + L1ME2 LINE L1 1730 2259 -3956 5190 160 13 12 chr2 121261857 121262759 -131993824 + MER4D LTR ERV1 1 903 0 1272 277 63 31 chr2 121262759 121263108 -131993475 + L1ME2 LINE L1 2259 2595 -3620 3055 20 0 0 chr2 121263155 121263510 -131993073 + L1PA2 LINE L1 5801 6155 0 248 283 135 17 chr2 121263510 121263747 -131992836 + L1ME2 LINE L1 2575 2839 -3376 2075 254 121 34 chr2 121263867 121265628 -131990955 + L1ME2 LINE L1 4052 5966 -267 268 252 34 109 chr2 121265658 121265909 -131990674 + L1P2 LINE L1 5322 5561 -593 265 312 24 8 chr2 121266088 121266213 -131990370 + L1ME LINE L1 5730 5856 -314 2812 164 47 2 chr2 121267147 121267678 -131988905 - L1MC1 LINE L1 0 6333 5779 258 128 0 0 chr2 121267742 121267781 -131988802 - L1MC/D LINE L1 -508 5825 5787 844 171 67 80 chr2 121268867 121269160 -131987423 - MER34B LTR ERV1 -20 545 257 1545 158 45 2 chr2 121269160 121269608 -131986975 - MER34B LTR ERV1 0 565 3 776 219 88 22 chr2 121269610 121269849 -131986734 - MER34B LTR ERV1 -306 259 10 751 245 43 0 chr2 121270972 121271156 -131985427 + MER58B DNA MER1_type 131 322 -19 210 211 19 106 chr2 121271208 121271312 -131985271 - MIR SINE MIR -67 195 101 1480 162 195 12 chr2 121271972 121272306 -131984277 + MER31B LTR ERV1 17 411 -55 203 152 0 91 chr2 121273203 121273269 -131983314 - MER5C DNA MER1_type -16 308 249 255 142 104 194 chr2 121273378 121273512 -131983071 - MER5C DNA MER1_type -201 123 2 336 272 88 18 chr2 121273527 121273641 -131982942 + MER5B DNA MER1_type 7 128 -50 32 75 0 0 chr2 121274304 121274371 -131982212 + AT_rich Low_complexity Low_complexity 1 67 0 249 139 0 0 chr2 121274561 121274604 -131981979 + (ATG)n Simple_repeat Simple_repeat 2 44 0 1574 189 35 59 chr2 121276330 121276701 -131979882 + MER57A LTR ERV1 42 403 0 397 233 25 138 chr2 121278523 121278763 -131977820 + MER34C LTR ERV1 40 252 -333 1682 162 165 28 chr2 121278799 121279163 -131977420 + MSTB LTR MaLR 1 414 -12 293 229 120 62 chr2 121279187 121279443 -131977140 + MER34 LTR ERV1 281 530 -12 617 296 30 26 chr2 121280189 121280419 -131976164 + MIR SINE MIR 3 233 -29 2977 156 4 8 chr2 121280652 121281151 -131975432 - LOR1a LTR ERV1 0 497 1 301 330 10 0 chr2 121281813 121281910 -131974673 - MER94 DNA DNA -19 115 18 189 250 42 14 chr2 121282466 121282538 -131974045 - L2 LINE L2 -81 3232 3159 372 277 157 13 chr2 121282612 121282771 -131973812 + L2 LINE L2 3128 3309 -4 * 1147 307 110 27 chr2 121282764 121283132 -131973451 - L2 LINE L2 -141 3172 2836 1078 189 13 53 chr2 121283132 121283360 -131973223 + MER20 DNA MER1_type 1 219 0 1147 307 110 27 chr2 121283360 121283726 -131972857 - L2 LINE L2 -477 2836 2351 1486 132 180 6 chr2 121283728 121284077 -131972506 + MSTB LTR MaLR 1 426 0 223 154 0 0 chr2 121284077 121284116 -131972467 - L2 LINE L2 -961 2353 2315 631 258 60 22 chr2 121284117 121284299 -131972284 + MER39 LTR ERV1 3 191 -516 * 1858 193 25 18 chr2 121284293 121284692 -131971891 + MER39 LTR ERV1 306 707 0 455 342 77 13 chr2 121284692 121284926 -131971657 - L2 LINE L2 -995 2319 2071 211 289 0 0 chr2 121285285 121285330 -131971253 + (TG)n Simple_repeat Simple_repeat 2 46 0 322 416 42 51 chr2 121285375 121285731 -131970852 + L2 LINE L2 2886 3238 -34 42 0 0 0 chr2 121285732 121285774 -131970809 + AT_rich Low_complexity Low_complexity 1 42 0 204 97 0 0 chr2 121286420 121286451 -131970132 + (CA)n Simple_repeat Simple_repeat 2 32 0 374 164 0 0 chr2 121286523 121286584 -131969999 + L1MA4A LINE L1 4706 4766 -1380 3451 141 32 11 chr2 121286624 121287247 -131969336 + L1MA4A LINE L1 5665 6300 -3 1836 137 7 40 chr2 121287247 121287547 -131969036 - AluSx SINE Alu -22 290 1 345 301 18 9 chr2 121287831 121287944 -131968639 + MIR SINE MIR 149 262 0 351 227 0 0 chr2 121288740 121288837 -131967746 + CT-rich Low_complexity Low_complexity 3 99 0 1767 174 124 64 chr2 121288875 121289237 -131967346 - LTR44 LTR ERV1 -8 511 111 2049 142 3 0 chr2 121289237 121289540 -131967043 - AluSp SINE Alu -9 304 1 1767 174 124 64 chr2 121289540 121289659 -131966924 - LTR44 LTR ERV1 -408 111 1 204 97 0 0 chr2 121289985 121290016 -131966567 + (CA)n Simple_repeat Simple_repeat 2 32 0 310 264 109 0 chr2 121290387 121290497 -131966086 + MIR SINE MIR 78 199 -63 602 313 65 4 chr2 121291327 121291573 -131965010 + MLT1I LTR MaLR 59 319 -90 340 317 31 6 chr2 121291575 121291736 -131964847 - L1ME3A LINE L1 -43 6127 5963 1481 287 43 26 chr2 121291746 121292172 -131964411 - L1ME3A LINE L1 -250 5920 5503 2092 147 94 10 chr2 121292172 121292567 -131964016 + MSTA LTR MaLR 1 428 0 1481 287 43 26 chr2 121292567 121293078 -131963505 - L1ME3A LINE L1 -667 5503 4960 353 308 53 18 chr2 121293228 121293455 -131963128 - L1ME3A LINE L1 -2360 3786 3552 239 336 39 19 chr2 121294127 121294231 -131962352 + MIR SINE MIR 34 139 -123 235 331 41 33 chr2 121294240 121294361 -131962222 + L2 LINE L2 2658 2779 -535 443 335 44 38 chr2 121294453 121294793 -131961790 + L2 LINE L2 2929 3270 -43 291 54 0 0 chr2 121294816 121294853 -131961730 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 186 353 15 0 chr2 121295994 121296062 -131960521 + MIR SINE MIR 194 262 0 278 321 12 24 chr2 121296558 121296726 -131959857 + (TATG)n Simple_repeat Simple_repeat 2 167 0 191 146 24 49 chr2 121296949 121296990 -131959593 + MIR SINE MIR 211 250 -12 256 302 9 28 chr2 121297328 121297434 -131959149 - LTR16B LTR ERVL 0 464 361 246 186 0 0 chr2 121297538 121297581 -131959002 - LTR16B LTR ERVL -355 109 67 375 331 73 11 chr2 121297861 121298039 -131958544 + MIR SINE MIR 1 189 -73 1453 125 22 3 chr2 121298041 121298371 -131958212 - L1P4 LINE L1 -685 5483 5150 3112 99 17 4 chr2 121298381 121298845 -131957738 + L1PA10 LINE L1 5688 6157 -11 380 296 52 101 chr2 121298882 121299149 -131957434 - MIR SINE MIR -6 256 3 246 213 49 0 chr2 121300653 121300714 -131955869 + MER103 DNA DNA 101 164 -2 224 231 19 0 chr2 121302121 121302173 -131954410 - L2 LINE L2 -54 3259 3207 472 293 153 27 chr2 121302224 121302446 -131954137 - MIR SINE MIR -10 252 3 24 0 0 0 chr2 121302628 121302652 -131953931 + AT_rich Low_complexity Low_complexity 1 24 0 2175 125 0 0 chr2 121302661 121302956 -131953627 + AluSq SINE Alu 1 295 -18 1863 156 3 86 chr2 121303052 121303437 -131953146 - MLT1B LTR MaLR 0 390 38 192 369 19 10 chr2 121303450 121303553 -131953030 + MIR SINE MIR 92 195 -67 443 267 46 46 chr2 121303687 121303882 -131952701 + L2 LINE L2 3119 3313 0 7587 28 0 0 chr2 121304571 121305980 -131950603 - L1PA3 LINE L1 0 6155 4748 15420 31 2 1 chr2 121305980 121307855 -131948728 + L1PA3 LINE L1 2874 4750 -1396 6275 220 110 31 chr2 121308216 121310234 -131946349 - L1MC3 LINE L1 -12 7773 5597 307 330 40 23 chr2 121310251 121310427 -131946156 + L2 LINE L2 2893 3071 -201 183 42 0 0 chr2 121311028 121311052 -131945531 + (CA)n Simple_repeat Simple_repeat 1 24 0 353 290 69 0 chr2 121311918 121312049 -131944534 + MIR SINE MIR 106 245 -17 373 328 38 0 chr2 121313267 121313393 -131943190 + MIR SINE MIR 20 153 -62 391 330 18 0 chr2 121313560 121313669 -131942914 + MER5A DNA MER1_type 69 179 -10 1402 206 47 27 chr2 121315352 121315648 -131940935 + AluJo SINE Alu 6 307 -5 209 184 58 115 chr2 121317297 121317384 -131939199 + MIR SINE MIR 110 191 -71 384 250 47 94 chr2 121318155 121318347 -131938236 - MIR SINE MIR -49 213 31 340 313 86 0 chr2 121319049 121319177 -131937406 - MIR3 SINE MIR -6 202 64 400 145 0 0 chr2 121319401 121319470 -131937113 - L1PB3 LINE L1 -2 6152 6084 21 0 0 0 chr2 121323271 121323292 -131933291 + AT_rich Low_complexity Low_complexity 1 21 0 477 298 119 14 chr2 121324208 121324493 -131932090 + L2 LINE L2 2362 2676 -638 926 347 77 19 chr2 121324510 121324989 -131931594 + L2 LINE L2 2805 3311 -2 24 32 0 0 chr2 121325157 121325188 -131931395 + AT_rich Low_complexity Low_complexity 1 31 0 1847 327 88 21 chr2 121326286 121326870 -131929713 - L1M4 LINE L1 -863 5283 4607 7530 31 0 0 chr2 121326870 121328023 -131928560 - L1PA4 LINE L1 -5 6150 4998 1847 327 88 21 chr2 121328023 121328401 -131928182 - L1M4 LINE L1 -1539 4607 4256 1327 215 129 50 chr2 121328401 121328681 -131927902 + L1ME2 LINE L1 5309 5565 -599 1667 213 35 49 chr2 121328681 121329109 -131927474 - MSTB LTR MaLR -4 422 1 1327 215 129 50 chr2 121329109 121329385 -131927198 + L1ME2 LINE L1 5565 5986 -178 518 328 72 49 chr2 121329556 121330066 -131926517 + L1ME3A LINE L1 1025 1460 -4924 1892 160 0 0 chr2 121330111 121330398 -131926185 + AluSc SINE Alu 1 287 -22 405 332 93 8 chr2 121330632 121330891 -131925692 + L1ME3A LINE L1 4076 4356 -2026 1331 260 61 13 chr2 121330949 121331406 -131925177 + L1ME3A LINE L1 5731 6209 -197 4919 231 39 23 chr2 121331421 121334462 -131922121 + L1M3f LINE L1 14 3090 -3238 1341 162 5 0 chr2 121334468 121334672 -131921911 + AluJo SINE Alu 6 210 -102 875 219 0 9 chr2 121334682 121334910 -131921673 + L1M3f LINE L1 3093 3318 -3010 733 233 15 25 chr2 121335388 121335590 -131920993 + L1MA4 LINE L1 2709 2908 -3238 1234 176 5 0 chr2 121335596 121335800 -131920783 + AluJo SINE Alu 6 210 -102 3068 241 68 20 chr2 121335810 121336483 -131920100 + L1MA4 LINE L1 2911 3649 -2497 1258 7 0 13 chr2 121336483 121336636 -131919947 + (GAA)n Simple_repeat Simple_repeat 1 151 0 3068 241 68 20 chr2 121336636 121336962 -131919621 + L1MA4 LINE L1 3649 3958 -2188 3314 92 17 52 chr2 121336964 121337223 -131919360 + L1PB1 LINE L1 5227 5493 -658 2163 123 10 0 chr2 121337223 121337532 -131919051 + AluSx SINE Alu 1 312 0 3314 92 17 52 chr2 121337532 121337543 -131919040 + L1PB1 LINE L1 5493 5503 -648 2370 91 7 0 chr2 121337543 121337851 -131918732 + AluY SINE Alu 1 310 -1 3314 92 17 52 chr2 121337851 121338164 -131918419 + L1PB1 LINE L1 5503 5791 -360 306 73 0 0 chr2 121338166 121338207 -131918376 + (TG)n Simple_repeat Simple_repeat 2 42 0 2428 99 25 3 chr2 121338212 121338574 -131918009 + L1PB1 LINE L1 5782 6151 0 730 169 31 0 chr2 121338603 121338733 -131917850 + AluJo SINE Alu 1 134 -178 5813 193 9 19 chr2 121338765 121339001 -131917582 + L1MA4 LINE L1 3965 4202 -2098 838 143 0 23 chr2 121339001 121339134 -131917449 + FLAM_C SINE Alu 1 130 -3 5813 193 9 19 chr2 121339134 121341258 -131915325 + L1MA4 LINE L1 4202 6300 0 329 277 109 0 chr2 121341248 121341385 -131915198 + L1M4 LINE L1 4699 4850 -1296 * 1978 139 52 27 chr2 121341387 121341753 -131914830 + THE1C LTR MaLR 1 375 0 8765 159 12 34 chr2 121341755 121343306 -131913277 + THE1C-int LTR MaLR 3 1520 -60 303 177 0 0 chr2 121343309 121343371 -131913212 - MST-int LTR MaLR -1142 509 448 * 433 152 50 61 chr2 121343336 121343435 -131913148 - L1PBa LINE L1 -6132 731 634 968 186 10 15 chr2 121343435 121343634 -131912949 - L1PBa LINE L1 -6663 200 3 544 220 8 8 chr2 121343668 121343800 -131912783 + L1M4 LINE L1 4966 5097 -1049 1712 169 8 28 chr2 121343817 121344179 -131912404 + L1MA5 LINE L1 5940 6294 -6 295 250 62 39 chr2 121344259 121344387 -131912196 + L1ME3A LINE L1 6031 6161 -9 259 211 79 0 chr2 121344853 121344929 -131911654 - MER102a DNA MER1_type -1 329 248 477 306 117 45 chr2 121344959 121345250 -131911333 - MER102a DNA MER1_type -18 312 1 231 271 0 0 chr2 121345435 121345494 -131911089 + (TG)n Simple_repeat Simple_repeat 2 60 0 228 35 0 0 chr2 121346370 121346399 -131910184 + (CA)n Simple_repeat Simple_repeat 2 30 0 246 326 41 10 chr2 121346407 121346505 -131910078 - MIR SINE MIR -121 141 41 4976 197 51 50 chr2 121347352 121348699 -131907884 + L1MB1 LINE L1 3871 5219 -927 1251 99 0 0 chr2 121348870 121349510 -131907073 + (CCTAT)n Simple_repeat Simple_repeat 1 640 0 302 169 15 0 chr2 121350004 121350069 -131906514 + (TA)n Simple_repeat Simple_repeat 2 67 0 4392 47 0 0 chr2 121351265 121351801 -131904782 + L1PA5 LINE L1 5618 6153 -1 1159 190 13 22 chr2 121352151 121352377 -131904206 + MER58A DNA MER1_type 1 224 0 1851 175 0 3 chr2 121352796 121353088 -131903495 - AluJb SINE Alu -21 291 1 2213 119 38 24 chr2 121353302 121353672 -131902911 - THE1C LTR MaLR 0 375 1 2129 180 18 42 chr2 121354262 121354763 -131901820 - L1MA10 LINE L1 -2 6332 5844 1528 166 14 10 chr2 121354769 121355064 -131901519 + L1MA10 LINE L1 5540 5835 -354 265 309 24 8 chr2 121355358 121355481 -131901102 - LTR33 LTR ERVL -4 517 393 456 287 138 10 chr2 121356016 121356211 -131900372 - LTR33 LTR ERVL -253 268 49 1877 174 19 29 chr2 121356721 121357100 -131899483 - THE1C LTR MaLR 0 375 1 180 0 0 0 chr2 121358050 121358070 -131898513 + (A)n Simple_repeat Simple_repeat 1 20 0 399 316 60 6 chr2 121358792 121358960 -131897623 - LTR16C LTR ERVL -30 461 285 3574 120 41 0 chr2 121359044 121359601 -131896982 + LTR19B LTR ERV1 1 580 0 1381 209 36 4 chr2 121360102 121360380 -131896203 - AluJo SINE Alu -25 287 1 405 295 44 61 chr2 121360669 121361126 -131895457 - HAL1b LINE L1 -750 598 150 2436 74 0 0 chr2 121361421 121361719 -131894864 - AluY SINE Alu -13 298 1 1249 235 96 16 chr2 121361981 121362355 -131894228 - L1ME2 LINE L1 -62 6102 5699 585 225 71 28 chr2 121362901 121363083 -131893500 - MIR SINE MIR -22 240 51 2110 145 3 0 chr2 121363493 121363804 -131892779 - AluSq SINE Alu -1 312 1 536 111 0 12 chr2 121364255 121364336 -131892247 + MADE1 DNA Mariner 1 80 0 494 328 73 32 chr2 121365845 121366092 -131890491 - MIR SINE MIR 0 262 6 2324 36 57 0 chr2 121367015 121367295 -131889288 - AluY SINE Alu -15 296 1 258 350 122 9 chr2 121367787 121368001 -131888582 - MIR SINE MIR -5 257 20 1218 154 13 21 chr2 121369965 121370199 -131886384 + MLT2D LTR ERVL 1 232 -182 334 176 29 15 chr2 121370206 121370274 -131886309 + MLT2D LTR ERVL 347 415 -49 443 116 64 23 chr2 121370294 121370467 -131886116 + (TA)n Simple_repeat Simple_repeat 1 180 0 1726 185 17 6 chr2 121370783 121371139 -131885444 - MER46B DNA MER2_type -1 235 1 25 0 0 0 chr2 121373245 121373270 -131883313 + AT_rich Low_complexity Low_complexity 1 25 0 17206 188 25 7 chr2 121373843 121374663 -131881920 - L1PA14 LINE L1 -1 6811 6007 1688 173 21 11 chr2 121374663 121374946 -131881637 - AluJb SINE Alu -21 291 6 17206 188 25 7 chr2 121374946 121378616 -131877967 - L1PA14 LINE L1 -805 6007 2230 1375 228 95 110 chr2 121378617 121379575 -131877008 + LTR1B LTR ERV1 1 1020 0 10490 218 61 7 chr2 121379575 121380770 -131875813 - L1PA14 LINE L1 -4576 2211 852 5924 72 29 3 chr2 121380770 121381530 -131875053 + LTR17 LTR ERV1 1 780 0 10490 218 61 7 chr2 121381530 121382431 -131874152 - L1PA14 LINE L1 -5935 852 1 3530 182 94 6 chr2 121382534 121383325 -131873258 - L1MC3 LINE L1 0 7785 6926 365 186 70 0 chr2 121383591 121383677 -131872906 - L1ME4a LINE L1 -67 6054 5963 32 43 0 0 chr2 121383711 121383757 -131872826 + AT_rich Low_complexity Low_complexity 1 46 0 638 219 78 16 chr2 121384097 121384339 -131872244 + L1MDa LINE L1 1087 1343 -5197 * 3107 271 57 16 chr2 121384320 121385640 -131870943 + L1M4 LINE L1 2856 4229 -1917 1337 188 48 7 chr2 121385640 121385911 -131870672 + L1MD1 LINE L1 5949 6230 -12 741 274 33 0 chr2 121385911 121386123 -131870460 - L1ME1 LINE L1 -82 6084 5866 258 313 70 40 chr2 121386941 121387142 -131869441 - L2 LINE L2 0 3313 3107 21 36 0 0 chr2 121389497 121389525 -131867058 + AT_rich Low_complexity Low_complexity 1 28 0 6476 150 16 6 chr2 121389733 121391888 -131864695 - L1MA3 LINE L1 -5 6300 4124 222 222 37 0 chr2 121392252 121392306 -131864277 - L2 LINE L2 -2 3311 3256 1315 231 10 17 chr2 121392733 121393027 -131863556 + AluJo SINE Alu 3 294 -18 298 167 46 19 chr2 121393220 121393328 -131863255 + (CATATA)n Simple_repeat Simple_repeat 3 113 0 29 47 0 0 chr2 121394301 121394344 -131862239 + AT_rich Low_complexity Low_complexity 1 43 0 549 265 87 30 chr2 121394350 121394614 -131861969 - L1MC5 LINE L1 -384 7577 7299 334 315 221 30 chr2 121395104 121395434 -131861149 - L2 LINE L2 0 3313 2921 610 253 16 53 chr2 121395460 121395650 -131860933 - L2 LINE L2 -867 2447 2265 223 435 82 0 chr2 121396591 121396761 -131859822 + L2 LINE L2 2869 3052 -220 2086 164 3 3 chr2 121396969 121397340 -131859243 - L1M2 LINE L1 -532 5780 5410 618 261 123 50 chr2 121397343 121397428 -131859155 - LTR38 LTR ERV1 -19 537 460 4490 113 6 27 chr2 121397428 121398134 -131858449 - LTR8 LTR ERV1 0 691 1 618 261 123 50 chr2 121398134 121398469 -131858114 - LTR38 LTR ERV1 -96 460 86 1210 198 28 3 chr2 121398571 121398859 -131857724 + L1MA9 LINE L1 5996 6290 -22 362 171 132 0 chr2 121399887 121399963 -131856620 + MER39 LTR ERV1 4 89 -618 1839 211 52 63 chr2 121399972 121400544 -131856039 + LTR8A LTR ERV1 34 599 -128 310 208 50 75 chr2 121400595 121400715 -131855868 + LTR48 LTR ERV1 523 639 -148 592 186 0 0 chr2 121400715 121400958 -131855625 - FLAM_A SINE Alu 0 272 30 387 214 44 50 chr2 121400967 121401126 -131855457 + MER39 LTR ERV1 550 707 0 941 167 35 0 chr2 121401657 121401831 -131854752 + MLT-int LTR MaLR 1401 1580 -155 2779 10 0 0 chr2 121401884 121402185 -131854398 + AluY SINE Alu 1 301 -10 430 178 0 0 chr2 121402186 121402259 -131854324 - LTR29 LTR ERV1 -71 551 479 1999 119 68 7 chr2 121402259 121402627 -131853956 + LTR7 LTR ERV1 1 450 0 1116 187 26 45 chr2 121402627 121403063 -131853520 + HERVH LTR ERV1 1 459 -7254 9505 152 6 28 chr2 121403121 121404777 -131851806 + HERVH LTR ERV1 800 2419 -5294 2359 187 19 16 chr2 121404773 121405561 -131851022 + HERVH LTR ERV1 3608 4336 -2287 * 1139 143 11 0 chr2 121405549 121405738 -131850845 + HERVH LTR ERV1 6758 6948 -765 * 328 110 110 68 chr2 121405715 121405788 -131850795 + HERVH LTR ERV1 7638 7713 0 * 3360 113 7 32 chr2 121405789 121406344 -131850239 + HERVH LTR ERV1 7173 7713 0 1950 110 82 11 chr2 121406344 121406710 -131849873 + LTR7 LTR ERV1 1 450 0 2312 173 45 15 chr2 121406710 121406911 -131849672 - LTR29 LTR ERV1 -139 483 290 3943 132 72 56 chr2 121406911 121407678 -131848905 - MER4E LTR ERV1 0 779 1 2312 173 45 15 chr2 121407678 121407939 -131848644 - LTR29 LTR ERV1 -332 290 7 207 0 0 0 chr2 121407967 121407990 -131848593 + (TTTA)n Simple_repeat Simple_repeat 4 26 0 2153 108 0 0 chr2 121407992 121408270 -131848313 - AluSg SINE Alu -32 278 1 702 221 0 0 chr2 121408271 121408411 -131848172 + MLT1A1-int LTR MaLR 1596 1735 0 2309 27 10 24 chr2 121408451 121408746 -131847837 - L1PA4 LINE L1 -3 6152 5862 1551 220 11 25 chr2 121408747 121409101 -131847482 + MLT1A1 LTR MaLR 17 365 0 2364 61 3 3 chr2 121409332 121409628 -131846955 - AluY SINE Alu -15 296 1 26 0 0 0 chr2 121409636 121409662 -131846921 + AT_rich Low_complexity Low_complexity 1 26 0 354 23 0 0 chr2 121409715 121409758 -131846825 + (TTA)n Simple_repeat Simple_repeat 2 44 0 34 55 0 0 chr2 121410937 121410992 -131845591 + AT_rich Low_complexity Low_complexity 1 55 0 330 131 33 0 chr2 121410992 121411053 -131845530 - U7 snRNA snRNA 0 63 1 630 210 167 19 chr2 121411126 121411383 -131845200 + MER5C DNA MER1_type 6 300 -24 1571 212 0 7 chr2 121411383 121411671 -131844912 + AluJo SINE Alu 1 286 -26 453 62 0 0 chr2 121411671 121411736 -131844847 + (TA)n Simple_repeat Simple_repeat 2 66 0 23 0 0 0 chr2 121412140 121412163 -131844420 + AT_rich Low_complexity Low_complexity 1 23 0 1691 176 0 29 chr2 121412569 121412875 -131843708 - AluJb SINE Alu -15 297 1 1355 275 130 30 chr2 121412909 121413448 -131843135 - MLT1E LTR MaLR 0 593 1 932 270 93 27 chr2 121414173 121414699 -131841884 - L1MEc LINE L1 -2642 4315 3755 539 285 90 66 chr2 121414716 121415123 -131841460 - L1MEc LINE L1 -4139 2999 2568 2197 105 0 3 chr2 121415123 121415418 -131841165 + AluSg SINE Alu 6 299 -11 539 285 90 66 chr2 121415418 121415674 -131840909 - L1MEc LINE L1 -4570 2568 2320 32 26 0 0 chr2 121415699 121415738 -131840845 + AT_rich Low_complexity Low_complexity 1 39 0 605 294 93 10 chr2 121415800 121416198 -131840385 - L1MEc LINE L1 -4837 2122 1692 2491 117 3 6 chr2 121416203 121416553 -131840030 - THE1B LTR MaLR -15 349 1 10037 117 46 9 chr2 121416557 121417755 -131838828 - THE1B-int LTR MaLR -4 1576 309 2223 105 3 0 chr2 121417755 121418049 -131838534 + AluSp SINE Alu 1 295 -18 10037 117 46 9 chr2 121418049 121418370 -131838213 - THE1B-int LTR MaLR -1271 309 1 2434 109 3 55 chr2 121418370 121418585 -131837998 - THE1B LTR MaLR 0 364 176 2163 77 13 26 chr2 121418585 121418896 -131837687 + AluSc SINE Alu 3 309 0 2434 109 3 55 chr2 121418896 121419064 -131837519 - THE1B LTR MaLR -188 176 1 266 269 94 61 chr2 121419118 121419415 -131837168 - L1MEc LINE L1 -5196 1663 1357 2380 148 0 39 chr2 121419424 121419884 -131836699 - L1MA4 LINE L1 -6 6294 5853 521 88 12 0 chr2 121419884 121419964 -131836619 + (TTCC)n Simple_repeat Simple_repeat 1 81 0 2249 79 0 3 chr2 121419964 121420255 -131836328 - AluY SINE Alu -21 290 1 2326 168 65 53 chr2 121420255 121420856 -131835727 - L1MA4 LINE L1 -439 5861 5254 312 254 18 26 chr2 121421553 121421667 -131834916 - L1MEc LINE L1 -6656 203 91 386 297 74 40 chr2 121422338 121422513 -131834070 + MIR SINE MIR 13 193 -69 22 56 0 0 chr2 121423159 121423195 -131833388 + AT_rich Low_complexity Low_complexity 1 36 0 1180 217 77 12 chr2 121423311 121423634 -131832949 + MER2 DNA MER2_type 1 344 0 239 355 53 13 chr2 121424445 121424521 -131832062 + MIR SINE MIR 20 98 -164 330 339 54 0 chr2 121424608 121424738 -131831845 + MIR3 SINE MIR 64 200 -8 662 230 21 0 chr2 121424883 121425074 -131831509 - L1MA7 LINE L1 -11 6280 6086 245 340 107 60 chr2 121425177 121425562 -131831021 + L2 LINE L2 2910 3312 -1 23 0 0 0 chr2 121427164 121427187 -131829396 + AT_rich Low_complexity Low_complexity 1 23 0 41974 40 24 2 chr2 121427314 121433332 -131823251 + L1PA2 LINE L1 1 6155 0 1549 128 30 131 chr2 121433400 121433736 -131822847 - AluSx SINE Alu 0 302 1 489 17 0 0 chr2 121434176 121434234 -131822349 + (TA)n Simple_repeat Simple_repeat 2 59 0 3416 84 4 2 chr2 121434592 121435044 -131821539 - MLT2A2 LTR ERVL 0 453 1 2230 103 0 31 chr2 121435084 121435404 -131821179 - AluSq SINE Alu 0 313 4 192 40 0 0 chr2 121435430 121435455 -131821128 + (A)n Simple_repeat Simple_repeat 1 25 0 461 269 47 57 chr2 121436074 121436286 -131820297 - MLT1J LTR MaLR -2 509 300 2470 134 31 54 chr2 121436289 121436768 -131819815 - LTR44 LTR ERV1 -2 517 50 325 128 0 0 chr2 121436839 121436886 -131819697 - LTR44 LTR ERV1 -472 47 1 2063 157 80 52 chr2 121438027 121438406 -131818177 - L1MA7 LINE L1 -3 6288 5890 2398 124 22 6 chr2 121438406 121438761 -131817822 + THE1B LTR MaLR 2 362 -2 2063 157 80 52 chr2 121438761 121438896 -131817687 - L1MA7 LINE L1 -401 5890 5760 2062 123 3 0 chr2 121438896 121438913 -131817670 - AluSp SINE Alu -13 300 285 408 40 0 0 chr2 121438913 121438963 -131817620 + (TG)n Simple_repeat Simple_repeat 1 50 0 2062 123 3 0 chr2 121438963 121439230 -131817353 - AluSp SINE Alu -28 285 15 6758 87 19 4 chr2 121439242 121440206 -131816377 - MER11B LTR ERVK -119 1147 1 4561 192 38 3 chr2 121440207 121441196 -131815387 - L1 LINE L1 -1553 4593 3570 309 315 13 40 chr2 121441713 121441862 -131814721 + MLT1H LTR MaLR 108 252 -297 26 0 0 0 chr2 121442136 121442162 -131814421 + AT_rich Low_complexity Low_complexity 1 26 0 1350 165 19 0 chr2 121442291 121442503 -131814080 + MSTA LTR MaLR 213 428 0 8837 179 32 8 chr2 121442503 121443953 -131812630 + MSTA-int LTR MaLR 1 1494 -157 236 71 48 0 chr2 121443953 121443995 -131812588 + T-rich Low_complexity Low_complexity 1 44 0 8837 179 32 8 chr2 121443995 121444157 -131812426 + MSTA-int LTR MaLR 1494 1651 0 2032 171 33 3 chr2 121444157 121444520 -131812063 + MSTA LTR MaLR 1 374 -54 21 0 0 31 chr2 121444522 121444533 -131812050 + AT_rich Low_complexity Low_complexity 1 11 -20 1894 147 3 17 chr2 121444533 121444833 -131811750 - AluSx SINE Alu -16 296 1 21 0 0 31 chr2 121444833 121444853 -131811730 + AT_rich Low_complexity Low_complexity 11 31 0 316 307 90 12 chr2 121444891 121445057 -131811526 - MIR SINE MIR -37 225 47 269 292 11 22 chr2 121445416 121445505 -131811078 - MER113 DNA MER1_type? -22 499 412 454 274 35 50 chr2 121445567 121445768 -131810815 - L1ME3A LINE L1 -109 6061 5864 25 51 0 0 chr2 121446228 121446267 -131810316 + AT_rich Low_complexity Low_complexity 1 39 0 195 129 0 0 chr2 121446281 121446312 -131810271 + (CA)n Simple_repeat Simple_repeat 2 32 0 2063 148 0 0 chr2 121446622 121446920 -131809663 + AluSx SINE Alu 1 298 -14 1951 158 0 0 chr2 121448041 121448339 -131808244 - AluSx SINE Alu -14 298 1 311 294 151 31 chr2 121448442 121448734 -131807849 - L1ME4a LINE L1 -7 6114 5746 763 283 54 52 chr2 121448734 121449179 -131807404 + MLT1J1 LTR MaLR 1 446 0 311 294 151 31 chr2 121449179 121449342 -131807241 - L1ME4a LINE L1 -375 5746 5604 859 245 35 56 chr2 121450212 121450498 -131806085 - MER92C LTR ERV1 0 554 275 327 214 0 52 chr2 121450496 121450591 -131805992 - MER92C LTR ERV1 -245 309 148 * 449 330 42 53 chr2 121450641 121450905 -131805678 - L2 LINE L2 -480 2834 2574 2227 104 7 0 chr2 121451533 121451832 -131804751 + AluSx SINE Alu 1 301 -11 2474 35 0 0 chr2 121452498 121452781 -131803802 - AluY SINE Alu -9 302 20 35 88 0 0 chr2 121452987 121453078 -131803505 + AT_rich Low_complexity Low_complexity 1 91 0 22 70 0 0 chr2 121453142 121453185 -131803398 + AT_rich Low_complexity Low_complexity 1 43 0 554 333 0 12 chr2 121453276 121453444 -131803139 - MIR SINE MIR -85 177 12 196 273 91 91 chr2 121454066 121454187 -131802396 - L2 LINE L2 -11 3261 3141 1080 306 62 35 chr2 121454618 121455297 -131801286 - ERVL LTR ERVL -4096 1668 972 2075 123 33 0 chr2 121455325 121455626 -131800957 - AluSx SINE Alu 0 312 2 1847 27 0 0 chr2 121455719 121455939 -131800644 + L1PA2 LINE L1 5936 6155 0 2145 122 0 0 chr2 121456462 121456774 -131799809 + AluSx SINE Alu 1 312 0 923 278 78 23 chr2 121456938 121457283 -131799300 + ERVL LTR ERVL 4622 4985 -779 712 323 16 8 chr2 121457356 121457610 -131798973 + ERVL LTR ERVL 5113 5368 -396 2162 28 0 0 chr2 121457875 121458129 -131798454 + L1PA4 LINE L1 5897 6150 -5 643 254 291 14 chr2 121458249 121458599 -131797984 + LTR50 LTR ERVL 20 466 -329 365 227 189 0 chr2 121458615 121458747 -131797836 + LTR50 LTR ERVL 613 769 -26 685 321 46 0 chr2 121459132 121459372 -131797211 + MIR SINE MIR 6 256 -6 404 295 82 41 chr2 121460162 121460673 -131795910 + L1MC4a LINE L1 5413 5645 -476 737 285 60 35 chr2 121463873 121464442 -131792141 - L1MC5 LINE L1 -86 7875 7293 296 64 21 0 chr2 121465147 121465194 -131791389 + (TTG)n Simple_repeat Simple_repeat 1 48 0 1674 160 47 0 chr2 121465203 121465478 -131791105 - AluJb SINE Alu -19 293 6 845 195 51 81 chr2 121465911 121466147 -131790436 + MER106A DNA MER1_type 8 236 0 225 180 0 0 chr2 121466646 121466696 -131789887 + GA-rich Low_complexity Low_complexity 1 50 0 857 98 8 8 chr2 121467205 121467338 -131789245 - L1PA10 LINE L1 -1 6167 6035 304 273 50 33 chr2 121467647 121467768 -131788815 + MIR SINE MIR 113 235 -27 214 280 0 0 chr2 121468299 121468349 -131788234 - MIR SINE MIR -7 255 206 327 323 59 36 chr2 121468904 121469124 -131787459 - MIR SINE MIR -27 235 11 187 279 0 0 chr2 121469933 121469976 -131786607 - L2 LINE L2 0 3272 3230 2394 63 0 7 chr2 121470597 121470899 -131785684 - AluY SINE Alu -11 300 1 226 241 205 0 chr2 121471069 121471152 -131785431 - MIR SINE MIR -50 212 113 315 323 21 0 chr2 121471362 121471458 -131785125 + L2 LINE L2 3210 3307 -6 360 208 0 0 chr2 121474705 121474801 -131781782 + CT-rich Low_complexity Low_complexity 2 97 0 207 114 0 0 chr2 121475545 121475580 -131781003 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 215 173 19 0 chr2 121475608 121475660 -131780923 + (TA)n Simple_repeat Simple_repeat 1 53 0 254 244 0 44 chr2 121475660 121475750 -131780833 + L1MC4 LINE L1 6614 6699 -1343 270 96 39 0 chr2 121476344 121476396 -131780187 + (TA)n Simple_repeat Simple_repeat 1 54 0 246 178 55 0 chr2 121476465 121476538 -131780045 + (TA)n Simple_repeat Simple_repeat 2 78 0 512 155 97 77 chr2 121477225 121477380 -131779203 + L1ME2 LINE L1 6006 6163 -1 351 321 47 35 chr2 121477392 121477682 -131778901 + L1M4 LINE L1 4616 4914 -1232 1339 219 50 0 chr2 121477682 121477965 -131778618 + AluJo SINE Alu 1 297 -15 351 321 47 35 chr2 121477965 121478104 -131778479 + L1M4 LINE L1 4914 5050 -1096 245 297 56 39 chr2 121478148 121478562 -131778021 + L1ME3A LINE L1 3026 3446 -2700 421 303 35 104 chr2 121478563 121478986 -131777597 + L1ME3A LINE L1 3522 3915 -2231 371 356 205 10 chr2 121479098 121479410 -131777173 + MLT1J2 LTR MaLR 78 450 0 988 127 20 0 chr2 121479618 121479933 -131776650 + L1M3 LINE L1 5351 5699 -469 10258 147 2 25 chr2 121479937 121481732 -131774851 + L1P LINE L1 3076 4829 -1317 192 77 0 0 chr2 121482088 121482114 -131774469 + (CA)n Simple_repeat Simple_repeat 1 26 0 280 282 81 28 chr2 121482206 121482454 -131774129 + L1ME3A LINE L1 5100 5360 -786 338 291 182 18 chr2 121482648 121482978 -131773605 + L1ME3A LINE L1 5567 5950 -220 22 35 0 0 chr2 121483142 121483171 -131773412 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 121483194 121483216 -131773367 + AT_rich Low_complexity Low_complexity 1 22 0 659 246 29 12 chr2 121483985 121484156 -131772427 + MER5A DNA MER1_type 10 183 -6 1861 220 105 22 chr2 121484674 121485228 -131771355 + MER50 LTR ERV1 135 734 0 280 325 56 24 chr2 121485667 121485793 -131770790 - L2 LINE L2 -1 3271 3142 475 297 105 75 chr2 121486039 121486305 -131770278 - L2 LINE L2 0 3272 2999 208 109 73 55 chr2 121487308 121487363 -131769220 + GA-rich Low_complexity Low_complexity 2 57 0 240 86 0 0 chr2 121487715 121487750 -131768833 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 2001 103 7 0 chr2 121488194 121488528 -131768055 - AluSq SINE Alu 0 336 1 3501 181 93 11 chr2 121490326 121491309 -131765274 - L1MA9 LINE L1 -4 6308 5155 635 214 28 0 chr2 121491305 121491450 -131765133 + L1MA9 LINE L1 5008 5156 -990 * 795 297 165 32 chr2 121491482 121491583 -131765000 - L2 LINE L2 -90 3223 3137 2064 139 0 0 chr2 121491583 121491877 -131764706 + AluSx SINE Alu 1 294 -18 795 297 165 32 chr2 121491877 121492481 -131764102 - L2 LINE L2 -176 3137 2418 305 305 157 33 chr2 121492971 121493302 -131763281 - MARNA DNA Mariner -197 389 18 484 316 89 6 chr2 121494098 121494256 -131762327 + MIR3 SINE MIR 30 200 -8 4619 191 22 35 chr2 121494736 121495118 -131761465 - L1PB2 LINE L1 -7 6860 6475 2356 82 0 0 chr2 121495118 121495424 -131761159 - AluY SINE Alu 0 311 6 4619 191 22 35 chr2 121495424 121496702 -131759881 - L1PB2 LINE L1 -392 6475 5214 627 218 26 0 chr2 121496704 121496860 -131759723 - L1PB2 LINE L1 -1569 5293 5134 7416 36 0 0 chr2 121496860 121497933 -131758650 - L1PA4 LINE L1 -2 6153 5078 8465 35 4 0 chr2 121497933 121498953 -131757630 + L1PA4 LINE L1 4054 5077 -1069 9145 247 25 27 chr2 121498957 121504789 -131751794 - L1PB2 LINE L1 -1724 5138 41 * 11465 224 26 36 chr2 121504788 121504905 -131751678 + L1PA16 LINE L1 1764 1881 -4285 11409 82 17 0 chr2 121504905 121507237 -131749346 + L1PA7 LINE L1 3804 6161 0 11465 224 26 36 chr2 121507237 121511556 -131745027 + L1PA16 LINE L1 1881 6157 -9 397 79 0 63 chr2 121511922 121511985 -131744598 + L1MC1 LINE L1 6265 6323 -10 3343 29 2 14 chr2 121512064 121512483 -131744100 + L1PA4 LINE L1 5741 6154 -1 21 0 0 0 chr2 121512784 121512805 -131743778 + AT_rich Low_complexity Low_complexity 1 21 0 203 372 62 0 chr2 121513140 121513285 -131743298 + MIR SINE MIR 104 257 -5 309 169 217 24 chr2 121513502 121513585 -131742998 + MER58 DNA MER1_type 1 99 -2321 451 179 84 0 chr2 121513597 121513692 -131742891 + MER58 DNA MER1_type 2318 2420 0 6723 30 0 1 chr2 121513959 121514753 -131741830 - L1PA4 LINE L1 -8 6147 5355 1585 48 5 5 chr2 121514750 121514958 -131741625 + L1PA4 LINE L1 5145 5352 -794 * 700 286 102 19 chr2 121515077 121515402 -131741181 - MLT1I LTR MaLR -51 358 7 1781 314 63 15 chr2 121515408 121516133 -131740450 + L2 LINE L2 552 1311 -2003 296 306 131 11 chr2 121516136 121516289 -131740294 + MER5A DNA MER1_type 4 178 -11 1425 286 46 56 chr2 121516319 121516931 -131739652 + L2 LINE L2 2057 2662 -652 651 275 12 23 chr2 121516950 121517121 -131739462 - MER8 DNA MER2_type -70 169 1 22 0 0 0 chr2 121517279 121517301 -131739282 + AT_rich Low_complexity Low_complexity 1 22 0 497 303 58 21 chr2 121517345 121517586 -131738997 - L1ME LINE L1 -340 5781 5532 189 0 0 0 chr2 121517809 121517830 -131738753 + (A)n Simple_repeat Simple_repeat 1 21 0 694 222 82 6 chr2 121518719 121518890 -131737693 - MER5A DNA MER1_type -5 184 1 266 167 0 0 chr2 121519164 121519212 -131737371 + MER53 DNA DNA 136 183 -6 1425 309 76 30 chr2 121520368 121521201 -131735382 - ERVL LTR ERVL -328 5436 4566 696 299 54 4 chr2 121521759 121522000 -131734583 - MIR SINE MIR -8 254 2 2011 129 4 0 chr2 121522390 121522668 -131733915 + AluSx SINE Alu 1 279 -33 220 355 57 8 chr2 121524333 121524457 -131732126 + MIR3 SINE MIR 74 203 -5 23 0 0 0 chr2 121525067 121525090 -131731493 + AT_rich Low_complexity Low_complexity 1 23 0 423 305 30 71 chr2 121525335 121525532 -131731051 + MLT1L LTR MaLR 3 191 -424 307 309 103 18 chr2 121525554 121525719 -131730864 - MLT1L LTR MaLR -65 550 372 399 309 19 49 chr2 121526199 121526229 -131730354 - MIR3 SINE MIR -28 180 151 1080 196 9 14 chr2 121526229 121526449 -131730134 - MER20 DNA MER1_type 0 219 1 399 309 19 49 chr2 121526449 121526580 -131730003 - MIR3 SINE MIR -57 151 24 804 309 142 23 chr2 121526669 121527112 -131729471 - MLT1J LTR MaLR -8 503 8 193 156 0 0 chr2 121527199 121527231 -131729352 + L2 LINE L2 3265 3296 -17 216 67 0 0 chr2 121527463 121527493 -131729090 + (TTA)n Simple_repeat Simple_repeat 2 31 0 2320 163 128 0 chr2 121528937 121529428 -131727155 + L1P LINE L1 4337 4890 -1256 273 160 40 0 chr2 121529428 121529478 -131727105 - HSMAR1 DNA Mariner -695 592 541 21 36 0 0 chr2 121529715 121529743 -131726840 + AT_rich Low_complexity Low_complexity 1 28 0 357 280 72 57 chr2 121529814 121530078 -131726505 - L1MC4a LINE L1 -1779 6029 5762 1769 223 41 9 chr2 121531287 121531723 -131724860 + L1MD3 LINE L1 7527 7976 -19 787 228 33 11 chr2 121531997 121532177 -131724406 - MER5A DNA MER1_type -1 188 5 490 305 49 32 chr2 121532295 121532794 -131723789 + L1MEd LINE L1 1028 1579 -4731 956 208 42 23 chr2 121533229 121533445 -131723138 - L1MA9 LINE L1 -213 6099 5880 358 145 13 40 chr2 121533462 121533538 -131723045 - L1M3a LINE L1 -5109 846 773 1223 144 0 0 chr2 121533540 121533714 -131722869 + AluSg/x SINE Alu 133 306 -6 355 321 137 43 chr2 121533714 121533991 -131722592 - L1M3a LINE L1 -5176 779 477 2345 257 68 25 chr2 121534079 121535939 -131720644 - L1 LINE L1 -3785 2597 979 338 294 109 91 chr2 121536184 121536449 -131720134 - L1 LINE L1 -5224 1089 820 184 250 42 0 chr2 121537016 121537064 -131719519 - L2 LINE L2 0 3272 3223 22 56 0 0 chr2 121537311 121537347 -131719236 + AT_rich Low_complexity Low_complexity 1 36 0 1041 224 109 37 chr2 121537352 121537492 -131719091 - MER2 DNA MER2_type 0 344 215 2446 84 0 3 chr2 121537492 121537803 -131718780 + AluY SINE Alu 1 310 -1 1041 224 109 37 chr2 121537803 121537983 -131718600 - MER2 DNA MER2_type -129 215 1 453 251 92 41 chr2 121538316 121538511 -131718072 - L2 LINE L2 0 3313 3109 233 320 78 16 chr2 121540150 121540278 -131716305 - L2 LINE L2 -202 3070 2935 338 346 96 4 chr2 121540321 121540601 -131715982 + L1ME LINE L1 5496 5801 -320 756 269 74 81 chr2 121540669 121541127 -131715456 + LTR16A1 LTR ERVL 1 455 -2 23 0 0 0 chr2 121541133 121541156 -131715427 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 121542321 121542342 -131714241 + AT_rich Low_complexity Low_complexity 1 21 0 288 0 0 0 chr2 121542433 121542465 -131714118 + (CA)n Simple_repeat Simple_repeat 1 32 0 214 177 16 16 chr2 121542519 121542581 -131714002 + GA-rich Low_complexity Low_complexity 1 62 0 219 326 33 11 chr2 121542691 121542783 -131713800 + MIR3 SINE MIR 109 202 -6 275 289 56 63 chr2 121543920 121544062 -131712521 - L2 LINE L2 -8 3305 3165 945 283 69 65 chr2 121544117 121544969 -131711614 + L1MEc LINE L1 57 912 -5484 2076 131 7 0 chr2 121544988 121545286 -131711297 - AluSx SINE Alu -12 300 1 2931 237 51 34 chr2 121545352 121547389 -131709194 - L1M4 LINE L1 -917 5229 3027 25 0 0 0 chr2 121549108 121549133 -131707450 + AT_rich Low_complexity Low_complexity 1 25 0 12871 88 32 4 chr2 121549460 121551428 -131705155 - HERVH LTR ERV1 -5689 2024 1 3532 51 0 7 chr2 121551430 121551881 -131704702 - LTR7 LTR ERV1 -2 448 1 291 54 0 0 chr2 121552232 121552269 -131704314 + (TA)n Simple_repeat Simple_repeat 1 37 0 381 264 146 66 chr2 121552414 121552702 -131703881 + L1MA4 LINE L1 1512 1822 -5744 528 250 18 18 chr2 121552845 121553073 -131703510 - L1 LINE L1 -1419 4727 4500 330 190 0 0 chr2 121553084 121553142 -131703441 - L1P LINE L1 -1576 4570 4513 7393 34 0 0 chr2 121553249 121554308 -131702275 - L1PA4 LINE L1 -18 6137 5078 4910 40 15 0 chr2 121554308 121554965 -131701618 + L1P LINE L1 4054 4720 -1426 6846 96 23 17 chr2 121555067 121556187 -131700396 + HERVH LTR ERV1 1869 2995 -4718 819 136 27 0 chr2 121556166 121556313 -131700270 + HERVH LTR ERV1 3140 3290 -4423 * 3119 119 2 6 chr2 121556303 121556807 -131699776 + HERVH LTR ERV1 3492 3993 -3720 3803 154 6 6 chr2 121556809 121557471 -131699112 + HERVH LTR ERV1 4488 5149 -2564 1356 125 19 0 chr2 121557472 121557688 -131698895 + HERVH LTR ERV1 5600 5819 -1894 2324 95 46 0 chr2 121557691 121558061 -131698522 + HERVH LTR ERV1 7327 7713 0 3273 52 0 69 chr2 121558061 121558542 -131698041 + LTR7 LTR ERV1 1 448 -2 24 32 0 0 chr2 121558869 121558900 -131697683 + AT_rich Low_complexity Low_complexity 1 31 0 10921 206 29 35 chr2 121559033 121560425 -131696158 + L1MA4 LINE L1 2914 4312 -3253 2401 57 3 20 chr2 121560425 121560724 -131695859 + AluY SINE Alu 1 294 -17 10921 206 29 35 chr2 121560724 121561555 -131695028 + L1MA4 LINE L1 4312 5146 -2419 2320 88 7 7 chr2 121561555 121561861 -131694722 + AluSx SINE Alu 5 310 -2 10921 206 29 35 chr2 121561861 121562412 -131694171 + L1MA4 LINE L1 5146 5699 -1866 2272 89 7 7 chr2 121562412 121562714 -131693869 + AluY SINE Alu 2 303 -8 10921 206 29 35 chr2 121562714 121563333 -131693250 + L1MA4 LINE L1 5699 6291 -1274 2358 167 39 7 chr2 121563333 121563746 -131692837 - MSTB LTR MaLR 0 426 1 10921 206 29 35 chr2 121563746 121564057 -131692526 + L1MA4 LINE L1 6291 6602 -963 625 217 38 11 chr2 121564064 121564287 -131692296 + L1MA4 LINE L1 5952 6170 -130 452 209 0 16 chr2 121564275 121564404 -131692179 + L1MA4 LINE L1 6601 6727 -838 * 823 182 34 14 chr2 121564404 121564613 -131691970 + Tigger2 DNA MER2_type 1 213 -2505 1733 163 0 0 chr2 121564614 121564896 -131691687 + Tigger2 DNA MER2_type 464 745 -1973 1304 183 20 0 chr2 121564958 121565210 -131691373 + Tigger2 DNA MER2_type 2462 2718 0 4844 168 14 7 chr2 121565218 121566184 -131690399 + L1MA4 LINE L1 6742 7714 -5 541 341 77 26 chr2 121566733 121567149 -131689434 + HERV16 LTR ERVL 2401 2837 -2159 896 312 82 24 chr2 121567395 121567809 -131688774 + HERV16 LTR ERVL 2401 2838 -2158 316 310 18 9 chr2 121567827 121567940 -131688643 + HERV16 LTR ERVL 2978 3091 -1905 489 317 18 72 chr2 121568187 121568630 -131687953 + HERV16 LTR ERVL 3988 4377 -619 398 330 58 5 chr2 121569274 121569480 -131687103 + LTR16A LTR ERVL 1 217 -233 335 270 16 63 chr2 121570989 121571115 -131685468 - MER5A DNA MER1_type -53 136 17 323 194 31 31 chr2 121571474 121571572 -131685011 + MER103 DNA DNA 2 99 -67 1422 82 4 98 chr2 121571793 121572048 -131684535 - L1PB1 LINE L1 0 6151 5921 5717 230 24 16 chr2 121572048 121572302 -131684281 - L1MCa LINE L1 -2374 4052 3802 351 0 0 0 chr2 121572302 121572341 -131684242 + (TTG)n Simple_repeat Simple_repeat 1 39 0 5717 230 24 16 chr2 121572341 121573973 -131682610 - L1MCa LINE L1 -2624 3802 1614 17420 209 57 13 chr2 121573977 121574056 -131682527 + L1MA2 LINE L1 17 91 -7632 210 37 0 0 chr2 121574056 121574083 -131682500 + (CA)n Simple_repeat Simple_repeat 2 28 0 17420 209 57 13 chr2 121574083 121581371 -131675212 + L1MA2 LINE L1 91 7722 -1 5348 215 29 16 chr2 121581388 121581715 -131674868 - L1PBa LINE L1 -4334 2529 2208 1527 181 7 14 chr2 121581715 121582007 -131674576 + AluJb SINE Alu 1 290 -22 5348 215 29 16 chr2 121582007 121584520 -131672063 - L1PBa LINE L1 -4655 2208 601 1015 293 44 16 chr2 121584541 121585046 -131671537 - L1PBa LINE L1 -6342 521 3 3159 259 64 51 chr2 121585057 121585086 -131671497 + L1ME LINE L1 1976 2003 -4212 3485 168 67 29 chr2 121585086 121585882 -131670701 - LTR1B LTR ERV1 0 826 1 3159 259 64 51 chr2 121585882 121585905 -131670678 + L1ME LINE L1 2003 2024 -4191 4983 106 14 9 chr2 121585905 121586667 -131669916 + MER4E LTR ERV1 1 766 0 3159 259 64 51 chr2 121586667 121588600 -131667983 + L1ME LINE L1 2024 3947 -2268 763 254 157 25 chr2 121588616 121588935 -131667648 + L1ME LINE L1 5371 5731 -504 526 220 50 13 chr2 121588946 121589105 -131667478 + L1MA10 LINE L1 6170 6334 0 510 279 64 43 chr2 121589127 121589900 -131666683 + L1MEd LINE L1 433 1257 -4862 32 43 0 0 chr2 121589948 121589994 -131666589 + AT_rich Low_complexity Low_complexity 1 46 0 397 303 101 66 chr2 121590598 121590796 -131665787 - L3 LINE CR1 -5 1572 1368 475 266 120 19 chr2 121590852 121591062 -131665521 - MIR SINE MIR 0 262 29 465 213 0 0 chr2 121591493 121591568 -131665015 + FRAM/FAM SINE Alu 10 84 -92 1211 143 52 81 chr2 121592126 121592398 -131664185 - L1PA10 LINE L1 0 6168 5905 507 77 0 0 chr2 121592391 121592456 -131664127 + L1PA10 LINE L1 5838 5902 -266 * 364 333 57 68 chr2 121592460 121592739 -131663844 - L2 LINE L2 -5 3267 2992 1660 222 52 34 chr2 121592834 121593330 -131663253 - MLT1D LTR MaLR 0 505 1 442 287 116 8 chr2 121593528 121593779 -131662804 + LTR16A LTR ERVL 152 429 -21 2319 78 0 0 chr2 121594027 121594355 -131662228 - AluY SINE Alu 0 328 1 494 287 65 5 chr2 121594359 121594578 -131662005 - L1M4c LINE L1 -884 1859 1556 399 113 0 0 chr2 121594648 121594710 -131661873 + (GGAA)n Simple_repeat Simple_repeat 3 64 0 204 40 0 0 chr2 121596299 121596324 -131660259 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 365 318 115 7 chr2 121596524 121596672 -131659911 + MIR SINE MIR 22 185 -77 269 299 131 23 chr2 121597009 121597223 -131659360 + L2 LINE L2 2979 3215 -98 298 280 62 99 chr2 121597341 121597552 -131659031 + MIR3 SINE MIR 5 207 -1 194 299 10 93 chr2 121598667 121598764 -131657819 - MIR3 SINE MIR -31 177 89 267 282 13 60 chr2 121599248 121599397 -131657186 - L1MC4a LINE L1 -1910 5898 5757 460 344 70 36 chr2 121600019 121600321 -131656262 - HAL1 LINE L1 -738 1769 1458 192 77 0 0 chr2 121600585 121600611 -131655972 + (CATATA)n Simple_repeat Simple_repeat 2 27 0 644 332 85 11 chr2 121600666 121601042 -131655541 + L1ME LINE L1 139 542 -5663 388 270 7 15 chr2 121601292 121601429 -131655154 + L1ME LINE L1 1844 1979 -4417 651 297 172 44 chr2 121601511 121602219 -131654364 - L1M4 LINE L1 -2440 3706 2908 707 217 64 64 chr2 121602385 121602588 -131653995 + MER63A DNA MER1_type 5 207 -3 292 283 37 65 chr2 121602677 121603034 -131653549 - L1M4 LINE L1 -3597 2549 2204 22 0 0 0 chr2 121603103 121603125 -131653458 + AT_rich Low_complexity Low_complexity 1 22 0 304 293 101 30 chr2 121603439 121603736 -131652847 - HAL1b LINE L1 -510 838 521 244 369 0 0 chr2 121603750 121603853 -131652730 + L2 LINE L2 3211 3313 0 625 308 14 29 chr2 121604636 121604844 -131651739 - MIR SINE MIR -10 252 48 710 258 86 47 chr2 121605251 121605484 -131651099 + MIR SINE MIR 2 243 -19 349 325 26 8 chr2 121605584 121605701 -131650882 - MIR3 SINE MIR -54 154 36 1446 161 3 102 chr2 121605722 121606045 -131650538 - AluJo SINE Alu -21 291 1 243 141 16 62 chr2 121606108 121606172 -131650411 + (TATATG)n Simple_repeat Simple_repeat 1 61 0 24 32 0 0 chr2 121606206 121606237 -131650346 + AT_rich Low_complexity Low_complexity 1 31 0 206 203 13 25 chr2 121606625 121606704 -131649879 + (TTA)n Simple_repeat Simple_repeat 3 80 0 672 282 68 49 chr2 121606920 121607349 -131649234 + L1M4 LINE L1 3859 4295 -1851 2127 114 26 10 chr2 121607546 121607854 -131648729 + AluSq SINE Alu 1 313 0 1931 153 8 33 chr2 121608249 121608615 -131647968 + L1PA13 LINE L1 5807 6163 0 2229 53 43 17 chr2 121610127 121610429 -131646154 - AluY SINE Alu -1 310 1 21 82 0 0 chr2 121610446 121610495 -131646088 + AT_rich Low_complexity Low_complexity 1 49 0 2567 129 86 36 chr2 121611777 121612351 -131644232 + MER4B LTR ERV1 10 779 0 2028 21 0 0 chr2 121612634 121612867 -131643716 - L1PA3 LINE L1 -5 6150 5918 183 42 0 0 chr2 121613633 121613657 -131642926 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 665 100 0 36 chr2 121613657 121613767 -131642816 - AluY SINE Alu -33 278 173 416 256 143 8 chr2 121614422 121614555 -131642028 - MLT1H LTR MaLR -376 173 23 208 123 15 62 chr2 121614875 121614940 -131641643 + T-rich Low_complexity Low_complexity 5 66 0 196 98 0 39 chr2 121614953 121615004 -131641579 + (TTTTTA)n Simple_repeat Simple_repeat 2 50 0 487 67 0 124 chr2 121615067 121615121 -131641462 - MADE1 DNA Mariner -2 78 38 2029 90 0 8 chr2 121615121 121615388 -131641195 + AluSg SINE Alu 34 298 -12 487 67 0 124 chr2 121615388 121615422 -131641161 - MADE1 DNA Mariner -42 38 1 315 320 85 20 chr2 121615436 121615589 -131640994 - L3 LINE CR1 -38 1539 1377 1437 225 61 59 chr2 121615668 121616126 -131640457 - MLT1C LTR MaLR 0 467 9 301 292 50 17 chr2 121616142 121616262 -131640321 - L3 LINE CR1 -313 1264 1141 455 289 20 33 chr2 121617045 121617197 -131639386 + MIR SINE MIR 3 152 -110 292 107 36 0 chr2 121617210 121617266 -131639317 - L1MA4A LINE L1 -12 6291 6234 3815 81 15 20 chr2 121617267 121617811 -131638772 + L1PA7 LINE L1 5613 6153 -1 400 194 0 0 chr2 121617812 121617894 -131638689 + L1ME LINE L1 5588 5672 -492 * 312 27 0 0 chr2 121617896 121617933 -131638650 + (CA)n Simple_repeat Simple_repeat 2 38 0 598 165 0 9 chr2 121617933 121618035 -131638548 - L1MA4A LINE L1 -69 6234 6132 189 94 0 0 chr2 121618035 121618067 -131638516 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 751 212 75 0 chr2 121618069 121618215 -131638368 - AluJb SINE Alu -26 286 130 636 117 10 0 chr2 121618216 121618319 -131638264 - L1MA4A LINE L1 -162 6141 6038 269 269 0 15 chr2 121618319 121618386 -131638197 + MIR SINE MIR 169 234 -28 2899 234 29 38 chr2 121618423 121618535 -131638048 + L1ME1 LINE L1 4680 4792 -1374 1944 127 99 70 chr2 121618535 121618951 -131637632 + MSTA LTR MaLR 1 428 0 2899 234 29 38 chr2 121618951 121619571 -131637012 + L1ME1 LINE L1 4792 5417 -749 1459 212 11 4 chr2 121619571 121619849 -131636734 + AluJb SINE Alu 1 280 -32 2899 234 29 38 chr2 121619849 121620567 -131636016 + L1ME1 LINE L1 5417 6092 -74 776 120 0 70 chr2 121622180 121622322 -131634261 + AluJo SINE Alu 6 137 -175 1012 200 65 22 chr2 121622560 121622853 -131633730 + L1PA16 LINE L1 5905 6207 0 2784 22 0 0 chr2 121623528 121623839 -131632744 + AluY SINE Alu 1 311 0 457 257 203 14 chr2 121624371 121624519 -131632064 - MER5A DNA MER1_type 0 189 14 397 345 85 34 chr2 121624960 121625253 -131631330 + L3 LINE CR1 1180 1487 -90 2171 110 19 3 chr2 121625706 121626014 -131630569 + AluSq SINE Alu 1 313 0 317 266 72 18 chr2 121626035 121626287 -131630296 - LTR33 LTR ERVL 0 521 225 393 237 32 0 chr2 121626653 121626746 -131629837 + MER117 DNA MER1_type 42 137 -60 212 309 12 0 chr2 121627360 121627444 -131629139 - MIR SINE MIR -2 260 176 224 159 43 14 chr2 121627482 121627551 -131629032 + (TA)n Simple_repeat Simple_repeat 2 72 0 349 289 61 6 chr2 121627555 121627701 -131628882 + MER63 DNA MER1_type 672 1060 0 468 278 146 35 chr2 121627724 121628071 -131628512 - MLT1J1 LTR MaLR -21 425 68 288 303 81 0 chr2 121630216 121630315 -131626268 - L2 LINE L2 -11 3261 3155 445 335 62 4 chr2 121630486 121630713 -131625870 - MIR SINE MIR -3 259 20 186 301 80 53 chr2 121631279 121631392 -131625191 + MIR SINE MIR 20 135 -127 4504 181 31 9 chr2 121631531 121632395 -131624188 - L1MB3 LINE L1 -3 6180 5267 198 0 0 0 chr2 121632395 121632417 -131624166 + (TTG)n Simple_repeat Simple_repeat 3 24 0 4504 181 31 9 chr2 121632417 121633032 -131623551 - L1MB3 LINE L1 -916 5267 4667 1968 176 93 3 chr2 121633043 121633429 -131623154 + MSTA LTR MaLR 8 428 0 237 200 0 0 chr2 121633429 121633479 -131623104 - L1MB3 LINE L1 -1475 4671 4622 12441 229 26 19 chr2 121634048 121638711 -131617872 + L1PB3 LINE L1 599 5229 -1641 198 0 0 0 chr2 121638711 121638733 -131617850 + (CAA)n Simple_repeat Simple_repeat 3 24 0 12441 229 26 19 chr2 121638733 121640087 -131616496 + L1PB3 LINE L1 5229 6572 -298 2450 102 22 19 chr2 121640087 121640448 -131616135 - THE1B LTR MaLR 0 364 3 11124 110 10 2 chr2 121640450 121642018 -131614565 - THE1B-int LTR MaLR 0 1580 1 2248 136 11 19 chr2 121642018 121642385 -131614198 - THE1B LTR MaLR 0 364 1 12441 229 26 19 chr2 121642385 121643515 -131613068 + L1PB3 LINE L1 6571 6865 -5 1079 102 6 0 chr2 121643527 121643693 -131612890 + LOR1-int LTR ERV1 1537 1703 -6417 1620 206 75 67 chr2 121643716 121644477 -131612106 + LOR1-int LTR ERV1 1971 3730 -2868 1258 173 17 21 chr2 121644514 121644853 -131611730 + LOR1-int LTR ERV1 3731 4091 -2240 320 125 0 0 chr2 121645026 121645074 -131611509 + LOR1-int LTR ERV1 3786 3833 -4287 3283 149 88 58 chr2 121645074 121645745 -131610838 - LTR8 LTR ERV1 0 691 1 256 140 18 18 chr2 121646032 121646089 -131610494 + LOR1-int LTR ERV1 4783 4839 -1492 * 428 195 138 0 chr2 121646082 121646214 -131610369 + LOR1-int LTR ERV1 3950 6134 -624 1673 195 17 23 chr2 121646219 121646618 -131609965 + LOR1-int LTR ERV1 6384 7137 -4 733 166 0 0 chr2 121646637 121646772 -131609811 + MER49 LTR ERV1 145 281 -642 * 807 164 27 0 chr2 121646760 121646906 -131609677 + MER49 LTR ERV1 611 760 -163 349 219 24 24 chr2 121646906 121646988 -131609595 + LTR38-int LTR ERV1 1995 2076 -5046 333 315 14 14 chr2 121647103 121647246 -131609337 + LTR38-int LTR ERV1 2209 2351 -4771 848 311 19 22 chr2 121647415 121647778 -131608805 + LTR38-int LTR ERV1 7145 7506 -250 2974 169 24 9 chr2 121647978 121648524 -131608059 + LTR38 LTR ERV1 3 556 0 183 42 0 0 chr2 121649264 121649288 -131607295 + (TAA)n Simple_repeat Simple_repeat 1 24 0 868 272 69 75 chr2 121649405 121649942 -131606641 - L1ME3A LINE L1 -1 6169 5636 525 185 35 0 chr2 121649981 121650154 -131606429 + (TA)n Simple_repeat Simple_repeat 2 180 0 191 181 56 0 chr2 121650198 121650270 -131606313 + (TA)n Simple_repeat Simple_repeat 1 76 0 455 166 54 4 chr2 121650298 121650528 -131606055 + (TA)n Simple_repeat Simple_repeat 1 241 0 353 230 40 0 chr2 121650693 121650793 -131605790 + L1ME1 LINE L1 6046 6149 -17 * 3062 236 40 40 chr2 121650788 121651414 -131605169 - L1ME LINE L1 -392 5774 5149 2159 125 3 0 chr2 121651414 121651725 -131604858 - AluSx SINE Alu 0 312 1 3062 236 40 40 chr2 121651725 121652602 -131603981 - L1ME LINE L1 -1017 5149 4274 215 339 0 0 chr2 121653059 121653124 -131603459 - L2 LINE L2 -5 3267 3203 3048 126 57 29 chr2 121653476 121654024 -131602559 + LTR24B LTR ERV1 14 576 0 274 245 0 85 chr2 121654334 121654428 -131602155 - MIR3 SINE MIR -11 197 112 23 68 0 0 chr2 121655240 121655284 -131601299 + AT_rich Low_complexity Low_complexity 1 44 0 467 362 31 9 chr2 121655339 121655563 -131601020 - MIR SINE MIR -28 234 6 4131 136 25 3 chr2 121655781 121656492 -131600091 - L1MA5A LINE L1 -2 6295 5569 3000 173 20 100 chr2 121657322 121657944 -131598639 - L1MA4A LINE L1 0 6305 5635 263 78 20 0 chr2 121657944 121657995 -131598588 + LTR66 LTR ERVL 389 440 -170 3000 173 20 100 chr2 121657995 121658157 -131598426 - L1MA4A LINE L1 -670 5635 5462 1396 219 9 22 chr2 121658157 121658472 -131598111 - AluJo SINE Alu -1 311 1 3000 173 20 100 chr2 121658472 121658717 -131597866 - L1MA4A LINE L1 -843 5462 5424 2223 98 3 3 chr2 121658717 121659023 -131597560 - AluSc SINE Alu -3 306 1 3000 173 20 100 chr2 121659023 121659399 -131597184 - L1MA4A LINE L1 -881 5424 5020 1615 99 5 0 chr2 121659560 121659772 -131596811 + AluSc SINE Alu 1 213 -96 306 89 0 0 chr2 121659773 121659818 -131596765 + AluSc SINE Alu 254 298 -3 32 43 0 0 chr2 121660197 121660243 -131596340 + AT_rich Low_complexity Low_complexity 1 46 0 308 314 92 7 chr2 121660545 121660698 -131595885 - MIR SINE MIR -34 228 63 23 78 0 0 chr2 121660856 121660907 -131595676 + AT_rich Low_complexity Low_complexity 1 51 0 27 29 0 0 chr2 121661157 121661191 -131595392 + AT_rich Low_complexity Low_complexity 1 34 0 1052 274 91 47 chr2 121661798 121662181 -131594402 - MLT1I LTR MaLR -5 404 5 3193 185 43 21 chr2 121663641 121663962 -131592621 - L1MB3 LINE L1 -10 6889 6577 2013 105 65 0 chr2 121663962 121664239 -131592344 - AluSg SINE Alu -15 295 1 3193 185 43 21 chr2 121664239 121664630 -131591953 - L1MB3 LINE L1 -322 6577 6161 2317 98 3 3 chr2 121665280 121665587 -131590996 + AluSc SINE Alu 1 307 -2 231 245 3 0 chr2 121665785 121665837 -131590746 - MIR SINE MIR -58 150 106 218 320 165 0 chr2 121666913 121667010 -131589573 + L2 LINE L2 3158 3270 -2 424 338 91 54 chr2 121667229 121667670 -131588913 + L2 LINE L2 2807 3263 -9 20111 24 0 0 chr2 121668258 121670729 -131585854 - L1P1 LINE L1 -693 5462 2993 9169 163 20 14 chr2 121670725 121674898 -131581685 - L1MB3 LINE L1 -1819 5043 625 * 270 183 50 0 chr2 121674886 121674946 -131581637 - L1MB3 LINE L1 -6666 197 135 * 4043 122 16 2 chr2 121674956 121675529 -131581054 - LTR9 LTR ERV1 0 612 32 7749 143 4 10 chr2 121675534 121676230 -131580353 - HUERS-P3 LTR ERV1 -4 8915 8227 2333 90 7 3 chr2 121676230 121676540 -131580043 - AluY SINE Alu 0 311 1 7749 143 4 10 chr2 121676540 121677023 -131579560 - HUERS-P3 LTR ERV1 -692 8227 7743 2770 153 9 9 chr2 121677020 121677471 -131579112 - HUERS-P3 LTR ERV1 -2372 6547 6097 * 186 43 0 0 chr2 121677644 121677667 -131578916 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 266 298 149 25 chr2 121677777 121677898 -131578685 + MIR3 SINE MIR 31 166 -42 284 330 20 0 chr2 121678209 121678309 -131578274 + L3 LINE CR1 1064 1165 -412 546 300 24 36 chr2 121679787 121679997 -131576586 + MIR SINE MIR 5 213 -49 2036 180 11 0 chr2 121679997 121680358 -131576225 + MLT1A1 LTR MaLR 1 365 0 546 300 24 36 chr2 121680358 121680397 -131576186 + MIR SINE MIR 213 251 -11 261 347 11 0 chr2 121681122 121681217 -131575366 - MIR3 SINE MIR -7 201 106 186 118 0 0 chr2 121681502 121681536 -131575047 + (TTA)n Simple_repeat Simple_repeat 3 36 0 269 347 91 16 chr2 121682179 121682369 -131574214 - MIR SINE MIR -38 224 20 260 270 102 77 chr2 121683351 121683547 -131573036 - L2 LINE L2 0 3313 3113 200 244 0 0 chr2 121683553 121683598 -131572985 + MIR SINE MIR 99 143 -119 194 308 0 0 chr2 121683635 121683687 -131572896 + L2 LINE L2 3209 3260 -12 188 239 113 28 chr2 121684069 121684140 -131572443 - MIR SINE MIR -8 254 178 1644 176 85 0 chr2 121684184 121684536 -131572047 - L1MC1 LINE L1 -16 6317 5936 520 226 20 68 chr2 121684847 121684993 -131571590 - MER102b DNA MER1_type -8 333 195 248 120 20 0 chr2 121685035 121685085 -131571498 + (TA)n Simple_repeat Simple_repeat 2 52 0 296 275 55 9 chr2 121685258 121685367 -131571216 - MIR3 SINE MIR -93 115 2 1493 206 56 0 chr2 121686971 121687277 -131569306 - MLT1B LTR MaLR 0 390 68 2353 125 19 8 chr2 121687624 121687984 -131568599 + THE1B LTR MaLR 1 364 0 10486 117 33 1 chr2 121687984 121689515 -131567068 + THE1B-int LTR MaLR 1 1580 0 1744 111 25 63 chr2 121689515 121689831 -131566752 + THE1B LTR MaLR 1 304 -60 2115 112 45 0 chr2 121689832 121690145 -131566438 - L1PA8A LINE L1 -3 6128 5802 3766 86 6 4 chr2 121690145 121690994 -131565589 + L1PA8A LINE L1 4951 5799 -332 394 123 14 14 chr2 121690994 121691067 -131565516 + THE1B LTR MaLR 292 364 0 21 0 0 0 chr2 121691264 121691285 -131565298 + AT_rich Low_complexity Low_complexity 1 21 0 765 299 8 35 chr2 121691589 121691843 -131564740 - MLT1I LTR MaLR 0 409 163 258 350 49 24 chr2 121692223 121692387 -131564196 + MIR SINE MIR 46 212 -50 262 336 8 61 chr2 121693004 121693135 -131563448 - MER5A DNA MER1_type -1 188 65 495 303 11 23 chr2 121693167 121693342 -131563241 + MER5B DNA MER1_type 2 174 -4 24 0 0 0 chr2 121693634 121693658 -131562925 + AT_rich Low_complexity Low_complexity 1 24 0 296 295 155 8 chr2 121693710 121693839 -131562744 - MIR SINE MIR -95 167 20 455 340 77 13 chr2 121694039 121694274 -131562309 - LTR16A LTR ERVL -176 274 25 648 325 77 35 chr2 121694557 121694900 -131561683 - L1MEd LINE L1 -2982 3147 2767 2414 159 33 7 chr2 121694900 121695321 -131561262 + MSTB1 LTR MaLR 1 432 0 648 325 77 35 chr2 121695321 121695578 -131561005 - L1MEd LINE L1 -3362 2767 2522 246 276 64 51 chr2 121695647 121695803 -131560780 - L1MEd LINE L1 -3674 2455 2298 1393 12 0 0 chr2 121696305 121696470 -131560113 - L1PA4 LINE L1 -254 5901 5737 1348 36 6 0 chr2 121696470 121696633 -131559950 + L1PA4 LINE L1 5988 6155 0 391 207 0 0 chr2 121696705 121696792 -131559791 + MSTB LTR MaLR 340 426 0 7709 217 24 26 chr2 121696794 121698442 -131558141 + MSTB-int LTR MaLR 3 1646 -5 1051 156 16 5 chr2 121698447 121698633 -131557950 + MSTB LTR MaLR 1 188 -238 322 258 16 16 chr2 121698840 121698968 -131557615 + (TTA)n Simple_repeat Simple_repeat 3 130 0 261 337 57 24 chr2 121699055 121699352 -131557231 - HAL1 LINE L1 -803 1704 1398 239 265 260 10 chr2 121699378 121699578 -131557005 - L1MEd LINE L1 -4883 1236 987 4362 110 20 13 chr2 121699595 121700296 -131556287 - L1MA3 LINE L1 -1 6304 5599 4131 195 20 10 chr2 121700310 121702011 -131554572 - L1PB3 LINE L1 -127 6084 4371 5121 30 0 0 chr2 121702018 121702621 -131553962 - L1PA2 LINE L1 -4 6151 5549 2535 89 11 0 chr2 121702724 121703083 -131553500 - HUERS-P3 LTR ERV1 -3258 5661 5299 749 62 44 18 chr2 121703092 121703205 -131553378 - L1PA8A LINE L1 -425 5706 5591 315 0 0 0 chr2 121703227 121703262 -131553321 + (CA)n Simple_repeat Simple_repeat 2 36 0 3458 137 6 23 chr2 121703262 121704033 -131552550 - HUERS-P3 LTR ERV1 -6625 793 575 1879 98 39 19 chr2 121704040 121704477 -131552106 - LTR9 LTR ERV1 -129 483 1 824 86 0 0 chr2 121704477 121704593 -131551990 - L1PBa LINE L1 -6745 118 3 2814 235 65 1 chr2 121704605 121705483 -131551100 - L1PB3 LINE L1 -2969 3234 2301 26797 124 13 68 chr2 121705489 121705872 -131550711 + L1PA8 LINE L1 12 415 -5757 207 114 0 0 chr2 121705872 121705907 -131550676 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 26797 124 13 68 chr2 121705907 121712058 -131544525 + L1PA8 LINE L1 415 6171 -1 4784 211 27 34 chr2 121712097 121712992 -131543591 - L1PB3 LINE L1 -3893 2310 1410 2157 63 41 4 chr2 121712992 121713261 -131543322 + AluY SINE Alu 23 301 -10 4784 211 27 34 chr2 121713261 121714627 -131541956 - L1PB3 LINE L1 -4793 1410 1 1208 289 30 15 chr2 121714594 121714992 -131541591 - L1PBa LINE L1 -5226 978 575 * 1307 314 45 23 chr2 121715211 121716084 -131540499 - L1PBa LINE L1 -5966 897 6 1926 165 33 0 chr2 121716100 121716683 -131539900 - L1M1 LINE L1 -696 7027 6423 * 14929 154 11 16 chr2 121716680 121719240 -131537343 - L1M1 LINE L1 -5005 2560 15 2999 94 7 0 chr2 121719282 121719709 -131536874 + LTR3 LTR ERVK 1 430 -2 3000 213 12 23 chr2 121720662 121721084 -131535499 - L1 LINE L1 -780 5366 4956 2128 119 3 7 chr2 121721084 121721379 -131535204 + AluSx SINE Alu 1 294 -18 3000 213 12 23 chr2 121721379 121721726 -131534857 - L1 LINE L1 -1190 4956 4606 1857 186 53 0 chr2 121721723 121722122 -131534461 + L1M2 LINE L1 5384 5803 -509 * 1527 158 11 77 chr2 121722155 121722521 -131534062 + L1MA9 LINE L1 5742 6083 -229 2422 200 15 11 chr2 121722521 121722995 -131533588 + MER70B LTR ERVL 1 476 -102 235 94 0 0 chr2 121722993 121723025 -131533558 + MER70A LTR ERVL 441 472 0 * 301 148 86 0 chr2 121723031 121723112 -131533471 + L1MA9 LINE L1 6203 6290 -22 526 205 47 24 chr2 121726005 121726132 -131530451 + MLT1E2 LTR MaLR 1 130 -375 1266 222 58 19 chr2 121726133 121726494 -131530089 - MLT1B LTR MaLR 0 390 16 1144 280 33 17 chr2 121726595 121726956 -131529627 + MLT1E2 LTR MaLR 260 626 0 594 327 93 30 chr2 121726963 121727436 -131529147 - L2 LINE L2 -94 3219 2723 1029 218 4 0 chr2 121727442 121727676 -131528907 + L1MD3 LINE L1 7751 7985 -10 345 348 160 28 chr2 121727685 121728116 -131528467 - L2 LINE L2 -583 2731 2244 230 205 12 0 chr2 121728543 121728626 -131527957 + (TA)n Simple_repeat Simple_repeat 1 84 0 565 330 58 49 chr2 121730863 121731315 -131525268 - L1MC4a LINE L1 -1732 6076 5621 244 297 105 37 chr2 121731318 121731641 -131524942 - L1MC4a LINE L1 -2138 5670 5326 522 291 85 64 chr2 121731825 121732340 -131524243 - L1MC4a LINE L1 -1440 4706 4181 354 195 0 0 chr2 121732414 121732491 -131524092 + (TA)n Simple_repeat Simple_repeat 2 78 0 383 212 41 54 chr2 121732603 121732805 -131523778 - L1MC4a LINE L1 -2255 3891 3692 244 405 68 0 chr2 121733370 121733518 -131523065 - MIR3 SINE MIR -11 197 40 310 280 53 47 chr2 121736319 121736469 -131520114 + MIR SINE MIR 33 183 -79 956 324 90 24 chr2 121736543 121737286 -131519297 - L2 LINE L2 -1 3312 2518 1074 286 164 16 chr2 121737604 121738166 -131518417 - L2 LINE L2 -1903 1411 767 248 155 0 35 chr2 121738497 121738555 -131518028 + CT-rich Low_complexity Low_complexity 2 57 0 237 224 60 0 chr2 121738578 121738645 -131517938 + (TAAA)n Simple_repeat Simple_repeat 2 72 0 893 228 0 51 chr2 121738911 121739126 -131517457 + AluJo SINE Alu 86 289 -23 676 308 75 40 chr2 121739130 121739607 -131516976 - MARNA DNA Mariner -19 567 74 507 222 34 17 chr2 121740816 121740933 -131515650 - MIR SINE MIR -121 141 23 300 413 65 0 chr2 121741153 121741308 -131515275 + L2 LINE L2 3108 3272 0 326 244 22 11 chr2 121741499 121741589 -131514994 + L1MC4 LINE L1 6613 6703 -1339 181 167 37 0 chr2 121741602 121741656 -131514927 + (TA)n Simple_repeat Simple_repeat 1 56 0 2130 102 57 28 chr2 121741665 121742017 -131514566 - THE1B LTR MaLR -2 362 1 508 62 25 0 chr2 121742037 121742118 -131514465 + (TAGA)n Simple_repeat Simple_repeat 4 86 0 5511 134 28 19 chr2 121742165 121743019 -131513564 + L1PB2 LINE L1 4840 5707 -444 309 68 0 0 chr2 121743019 121743063 -131513520 + (CA)n Simple_repeat Simple_repeat 2 45 0 5511 134 28 19 chr2 121743063 121743511 -131513072 + L1PB2 LINE L1 5707 6149 -2 189 0 0 0 chr2 121743515 121743536 -131513047 + (TAAAAA)n Simple_repeat Simple_repeat 2 22 0 2080 113 10 13 chr2 121743542 121743844 -131512739 - AluSq SINE Alu -12 301 1 1307 122 18 18 chr2 121743871 121744093 -131512490 - L1PA13 LINE L1 0 6163 5942 791 257 11 0 chr2 121745099 121745286 -131511297 + MER5A DNA MER1_type 1 189 0 288 0 0 0 chr2 121745408 121745440 -131511143 + (TTG)n Simple_repeat Simple_repeat 3 34 0 180 219 0 0 chr2 121748080 121748121 -131508462 - MIR3 SINE MIR -1 207 167 346 305 76 57 chr2 121748156 121748366 -131508217 + MIR SINE MIR 36 249 -13 2145 135 14 0 chr2 121749081 121749378 -131507205 + AluSg SINE Alu 1 301 -9 1662 163 68 39 chr2 121749676 121749935 -131506648 - MER7A DNA MER2_type -2692 346 75 2445 66 0 0 chr2 121749935 121750236 -131506347 - AluY SINE Alu -10 301 1 1662 163 68 39 chr2 121750236 121750313 -131506270 - MER7A DNA MER2_type -2963 75 2 237 282 30 61 chr2 121750850 121750981 -131505602 - LTR67 LTR ERVL -16 541 415 190 286 77 11 chr2 121751401 121751492 -131505091 - MIR SINE MIR -62 200 104 783 210 32 0 chr2 121751651 121751808 -131504775 - MER5A DNA MER1_type -6 183 22 29 78 0 0 chr2 121752025 121752089 -131504494 + AT_rich Low_complexity Low_complexity 1 64 0 673 293 64 66 chr2 121752703 121753187 -131503396 - LTR16C LTR ERVL -8 483 1 528 282 17 39 chr2 121753227 121753408 -131503175 + LTR41 LTR ERVL 14 190 -583 410 251 0 96 chr2 121753677 121753916 -131502667 + LTR41 LTR ERVL 552 767 -6 367 274 144 0 chr2 121754197 121754350 -131502233 - LTR16B LTR ERVL -23 441 267 1386 288 88 4 chr2 121754424 121754967 -131501616 + L2 LINE L2 2727 3310 -3 1103 326 194 12 chr2 121754983 121755888 -131500695 - L2 LINE L2 -471 2843 1774 378 294 20 14 chr2 121755909 121756055 -131500528 + L1MDa LINE L1 35 181 -6359 1300 206 18 0 chr2 121756057 121756333 -131500250 + L1ME LINE L1 5322 5602 -564 297 0 0 0 chr2 121756690 121756723 -131499860 + (CA)n Simple_repeat Simple_repeat 2 34 0 697 239 132 0 chr2 121757658 121757825 -131498758 + MER5A DNA MER1_type 1 189 0 1009 299 89 59 chr2 121757831 121758390 -131498193 + MER115 DNA AcHobo 59 634 -59 486 214 34 8 chr2 121758395 121758512 -131498071 - MER93b LTR ERV1 -2 371 252 23215 42 52 3 chr2 121758513 121761638 -131494945 + L1P LINE L1 2 3280 -2866 494 288 27 18 chr2 121761821 121762151 -131494432 + L1PA12 LINE L1 5814 6146 -22 234 0 0 0 chr2 121762165 121762191 -131494392 + (T)n Simple_repeat Simple_repeat 1 26 0 305 207 128 11 chr2 121762198 121762372 -131494211 - L1MEc LINE L1 -956 1620 1362 1108 190 79 0 chr2 121762675 121762891 -131493692 - MER46A DNA MER2_type 0 236 4 273 343 42 10 chr2 121762893 121763182 -131493401 - L1MEc LINE L1 -5226 979 682 249 285 108 8 chr2 121763382 121763512 -131493071 - L1MEc LINE L1 -5970 235 93 182 361 65 46 chr2 121763793 121764053 -131492530 + L2 LINE L2 3008 3272 0 1127 179 42 134 chr2 121764466 121764875 -131491708 + MLT1A2 LTR MaLR 3 373 -1 22 0 0 0 chr2 121765356 121765378 -131491205 + AT_rich Low_complexity Low_complexity 1 22 0 304 303 162 5 chr2 121766610 121766795 -131489788 - HAL1 LINE L1 -1220 1287 1074 1968 94 0 4 chr2 121767205 121767460 -131489123 + AluSx SINE Alu 1 254 -58 222 277 68 0 chr2 121767509 121767620 -131488963 - MIR SINE MIR -46 162 40 377 246 178 34 chr2 121768933 121769197 -131487386 + L2 LINE L2 3011 3312 -1 452 281 202 6 chr2 121770427 121770605 -131485978 + MIR SINE MIR 34 246 -16 3516 124 21 79 chr2 121772177 121772643 -131483940 - L1MA7 LINE L1 -3 6288 5879 2250 99 3 37 chr2 121772643 121772965 -131483618 + AluY SINE Alu 1 311 0 3516 124 21 79 chr2 121772965 121773241 -131483342 - L1MA7 LINE L1 -412 5879 5589 215 239 33 7 chr2 121773546 121773620 -131482963 - MIR SINE MIR -93 115 38 225 295 82 0 chr2 121775179 121775240 -131481343 - L2 LINE L2 -3 3310 3245 215 211 0 0 chr2 121775314 121775352 -131481231 + (TG)n Simple_repeat Simple_repeat 1 38 0 180 0 0 0 chr2 121775987 121776007 -131480576 + (T)n Simple_repeat Simple_repeat 1 20 0 217 226 0 38 chr2 121776216 121776269 -131480314 + CT-rich Low_complexity Low_complexity 1 51 0 192 256 0 90 chr2 121776269 121776347 -131480236 + L2 LINE L2 2599 2669 -645 194 265 0 84 chr2 121776946 121777029 -131479554 + L2 LINE L2 2896 2971 -301 3178 150 19 30 chr2 121777114 121777749 -131478834 - L1MA7 LINE L1 -9 6282 5655 600 93 0 21 chr2 121777751 121777848 -131478735 - MSTA-int LTR MaLR -1556 95 1 2471 126 69 10 chr2 121777848 121778252 -131478331 - MSTA LTR MaLR 0 428 1 4228 26 6 0 chr2 121778770 121779270 -131477313 - L1PA3 LINE L1 -1 6154 5652 225 292 91 34 chr2 121780384 121780648 -131475935 + L1ME3A LINE L1 3918 4196 -1950 507 324 75 20 chr2 121780887 121780983 -131475600 + L1ME3A LINE L1 4484 4573 -1605 1668 158 63 28 chr2 121780983 121781345 -131475238 - THE1C LTR MaLR 0 375 1 507 324 75 20 chr2 121781345 121782341 -131474242 + L1ME3A LINE L1 4573 5638 -540 309 357 54 42 chr2 121782352 121782688 -131473895 + L1ME3A LINE L1 5663 6002 -164 32 26 0 0 chr2 121782688 121782727 -131473856 + AT_rich Low_complexity Low_complexity 1 39 0 1809 171 0 13 chr2 121782854 121783159 -131473424 - AluJb SINE Alu -11 301 1 642 168 44 0 chr2 121783316 121783429 -131473154 - Tigger3(Golem) DNA MER2_type -20 3009 2892 600 256 71 8 chr2 121783438 121783692 -131472891 + MER114 LTR ERV 1 270 -378 496 247 126 31 chr2 121783723 121783978 -131472605 + MER114 LTR ERV 370 648 0 1810 191 52 0 chr2 121786314 121786697 -131469886 - MER57A LTR ERV1 0 403 1 478 301 52 0 chr2 121788251 121788404 -131468179 - MIR SINE MIR 0 262 102 322 336 36 64 chr2 121788457 121788691 -131467892 + MIR SINE MIR 34 261 -1 231 381 34 25 chr2 121789184 121789302 -131467281 + L2 LINE L2 3154 3272 0 381 335 24 29 chr2 121789318 121789488 -131467095 - MIR SINE MIR -82 180 12 10659 192 15 50 chr2 121789923 121792284 -131464299 + L1M2a LINE L1 2 2299 -4799 2058 175 75 8 chr2 121792511 121792910 -131463673 - MSTA LTR MaLR 0 428 3 8918 168 38 4 chr2 121792912 121794508 -131462075 - MSTA-int LTR MaLR 0 1651 3 1994 163 65 38 chr2 121794510 121794909 -131461674 - MSTA LTR MaLR 0 428 19 326 219 49 12 chr2 121794917 121794999 -131461584 + MIR SINE MIR 119 203 -59 190 305 116 129 chr2 121795125 121795358 -131461225 - L2 LINE L2 -36 3236 3007 631 294 25 10 chr2 121795569 121795770 -131460813 + MER93a LTR ERV1 91 294 -108 35 54 0 0 chr2 121795770 121795826 -131460757 + AT_rich Low_complexity Low_complexity 1 56 0 4040 150 9 7 chr2 121795826 121796507 -131460076 - L1PA16 LINE L1 -10 6156 5475 6319 26 1 0 chr2 121796525 121797268 -131459315 - L1PA2 LINE L1 0 6155 5412 13543 35 0 1 chr2 121797268 121798970 -131457613 - L1PA2 LINE L1 -1051 5095 3395 1531 201 42 7 chr2 121800030 121800319 -131456264 - AluJb SINE Alu -13 299 1 288 283 62 28 chr2 121800326 121800471 -131456112 - MIR3 SINE MIR -43 165 16 1103 169 100 113 chr2 121801032 121801422 -131455161 + MLT1B LTR MaLR 6 390 0 224 293 0 17 chr2 121803419 121803477 -131453106 - MIR3 SINE MIR -8 200 144 1984 211 45 32 chr2 121803759 121804252 -131452331 + MLT1D LTR MaLR 1 499 -6 1685 138 99 42 chr2 121804302 121804657 -131451926 + THE1C LTR MaLR 1 375 0 221 287 93 16 chr2 121805539 121805668 -131450915 - MIR3 SINE MIR -67 141 3 693 307 9 14 chr2 121806448 121806663 -131449920 + MIR SINE MIR 31 244 -18 24 0 0 0 chr2 121807319 121807343 -131449240 + AT_rich Low_complexity Low_complexity 1 24 0 3546 94 25 2 chr2 121807343 121807864 -131448719 - L1PB1 LINE L1 0 6151 5619 7924 190 22 11 chr2 121807868 121808138 -131448445 + L1P5 LINE L1 3412 3677 -2474 207 0 0 0 chr2 121808138 121808161 -131448422 + (CAA)n Simple_repeat Simple_repeat 2 24 0 7924 190 22 11 chr2 121808161 121810053 -131446530 + L1P5 LINE L1 3677 5596 -555 355 350 14 35 chr2 121811428 121811571 -131445012 + L2 LINE L2 3133 3272 0 352 207 49 0 chr2 121812590 121812672 -131443911 + L1MC4 LINE L1 6620 6705 -1337 265 272 76 22 chr2 121812903 121812995 -131443588 + MIR SINE MIR 47 143 -119 23 0 0 0 chr2 121813288 121813311 -131443272 + AT_rich Low_complexity Low_complexity 1 23 0 254 346 28 0 chr2 121815034 121815141 -131441442 - MIR SINE MIR -79 183 74 910 88 4 51 chr2 121816264 121816537 -131440046 + (GGAA)n Simple_repeat Simple_repeat 1 260 0 270 0 0 0 chr2 121816538 121816568 -131440015 + (GAAA)n Simple_repeat Simple_repeat 1 30 0 2238 108 3 25 chr2 121818290 121818605 -131437978 - AluSx SINE Alu -4 308 1 239 259 93 19 chr2 121819855 121819963 -131436620 - L2 LINE L2 -4 3309 3194 599 285 72 9 chr2 121820025 121820246 -131436337 + MIR SINE MIR 28 262 0 499 421 97 45 chr2 121820407 121820892 -131435691 + L2 LINE L2 2804 3313 0 486 314 35 12 chr2 121821319 121821491 -131435092 - MIR3 SINE MIR -14 194 19 235 113 132 0 chr2 121822784 121822837 -131433746 + MER89 LTR ERV1 1 60 -499 908 222 14 5 chr2 121822970 121823177 -131433406 - MER58A DNA MER1_type -15 209 1 459 286 123 75 chr2 121823271 121823862 -131432721 - L2 LINE L2 -1 3312 2639 1176 204 82 35 chr2 121823876 121824195 -131432388 - MER44D DNA MER2_type -5 604 1 922 239 69 27 chr2 121824318 121824927 -131431656 - L1MCa LINE L1 -4323 2422 1769 4546 181 48 4 chr2 121824934 121826213 -131430370 - L1PA16 LINE L1 -8 6158 4844 1308 219 97 4 chr2 121826263 121826715 -131429868 - L1MCa LINE L1 -5011 1553 1060 1567 238 23 59 chr2 121826897 121827544 -131429039 - L1MCa LINE L1 -4868 1177 554 1526 304 14 12 chr2 121827606 121828168 -131428415 - L1MCa LINE L1 -5482 563 1 353 280 9 19 chr2 121828185 121828292 -131428291 - MLT1H LTR MaLR -335 214 109 361 240 10 0 chr2 121828428 121828532 -131428051 + LTR33A LTR ERVL 414 518 -5 854 222 54 5 chr2 121829125 121829328 -131427255 + MER20 DNA MER1_type 4 216 -3 415 304 16 0 chr2 121830079 121830204 -131426379 + MER58A DNA MER1_type 24 150 0 340 225 135 10 chr2 121830577 121830745 -131425838 + MIR SINE MIR 18 205 -57 889 282 0 36 chr2 121830864 121831116 -131425467 - MIR SINE MIR 0 262 20 1646 158 80 45 chr2 121831469 121831845 -131424738 + MLT1B LTR MaLR 1 390 0 371 236 0 19 chr2 121833034 121833140 -131423443 + MLT1J2 LTR MaLR 345 448 -2 262 255 99 50 chr2 121833956 121834097 -131422486 + MIR SINE MIR 69 216 -46 787 199 12 0 chr2 121834793 121834959 -131421624 + L1M2 LINE L1 1 168 -6681 * 10045 198 47 45 chr2 121834940 121837519 -131419064 + L1M2 LINE L1 692 3461 -3387 465 176 33 0 chr2 121837519 121837610 -131418973 - AluSg/x SINE Alu -16 296 203 10045 198 47 45 chr2 121837610 121839912 -131416671 + L1M2 LINE L1 3461 5756 -1092 3870 105 7 35 chr2 121840053 121840651 -131415932 - L1PA13 LINE L1 -126 6037 5457 * 4687 96 1 0 chr2 121840643 121841289 -131415294 - L1PA13 LINE L1 -3071 3075 2429 610 165 0 0 chr2 121841285 121841388 -131415195 + L1P LINE L1 1944 2046 -4100 * 4453 79 5 9 chr2 121841386 121842017 -131414566 + L1PA7 LINE L1 4747 5374 -772 4055 34 4 0 chr2 121842009 121842486 -131414097 - L1P LINE L1 -1586 4560 4082 * 7616 40 4 30 chr2 121842486 121843577 -131413006 + L1PA5 LINE L1 5078 6146 -8 6569 76 0 0 chr2 121843588 121844391 -131412192 + L1PA7 LINE L1 5352 6154 0 1685 91 0 4 chr2 121844481 121844829 -131411754 - L1P4 LINE L1 -687 5476 5132 * 11987 215 53 6 chr2 121844819 121848058 -131408525 - L1PA13 LINE L1 -3387 3410 1 180 217 0 0 chr2 121849191 121849237 -131407346 + (TG)n Simple_repeat Simple_repeat 2 47 0 2515 110 65 11 chr2 121849281 121849637 -131406946 - THE1C LTR MaLR 0 375 1 9605 114 52 49 chr2 121849642 121851211 -131405372 - THE1C-int LTR MaLR -6 1574 1 1379 104 62 14 chr2 121851211 121851422 -131405161 - THE1C LTR MaLR -2 373 153 * 1600 108 4 17 chr2 121851420 121851651 -131404932 - THE1C LTR MaLR -147 228 1 2865 260 42 41 chr2 121852267 121853442 -131403141 + L1MA7 LINE L1 830 1797 -4516 3596 243 19 16 chr2 121853458 121854481 -131402102 + L1MA7 LINE L1 2352 3377 -3005 33029 90 8 90 chr2 121854488 121859950 -131396633 + L1P LINE L1 11 5025 -1121 938 19 0 0 chr2 121859950 121860054 -131396529 + L1PA6 LINE L1 6050 6153 -1 33029 90 8 90 chr2 121860054 121860065 -131396518 + L1P LINE L1 5025 5035 -1111 9291 189 39 23 chr2 121860060 121861510 -131395073 + L1MA7 LINE L1 3354 4862 -1595 * 1531 134 166 4 chr2 121861510 121861763 -131394820 + AluSx SINE Alu 5 298 -4 9291 189 39 23 chr2 121861763 121862631 -131393952 + L1MA7 LINE L1 4862 5714 -743 1378 150 136 0 chr2 121862612 121862892 -131393691 + L1MA7 LINE L1 6201 6518 -9 * 22 0 0 0 chr2 121862923 121862945 -131393638 + AT_rich Low_complexity Low_complexity 1 22 0 220 321 12 12 chr2 121863192 121863276 -131393307 + MIR SINE MIR 133 216 -46 203 379 0 10 chr2 121864317 121864420 -131392163 - MIR SINE MIR -147 115 14 227 308 210 20 chr2 121864442 121864637 -131391946 + L2 LINE L2 293 524 -2790 23 0 0 0 chr2 121864658 121864681 -131391902 + AT_rich Low_complexity Low_complexity 1 23 0 16055 138 35 9 chr2 121864688 121873021 -131383562 - L1PB1 LINE L1 0 6867 1 422 351 64 55 chr2 121873612 121874287 -131382296 + L2 LINE L2 1137 1817 -1497 486 304 119 35 chr2 121874419 121874976 -131381607 - L2 LINE L2 0 3313 2452 7536 52 1 19 chr2 121875422 121876503 -131380080 + L1PA6 LINE L1 5088 6152 -2 1074 284 258 25 chr2 121876520 121877337 -131379246 - L2 LINE L2 -892 2422 1415 1042 285 131 50 chr2 121877337 121878205 -131378378 + L2 LINE L2 2001 2939 -375 320 244 42 76 chr2 121878311 121878430 -131378153 + L2 LINE L2 3199 3313 0 418 353 24 18 chr2 121878635 121878802 -131377781 + MIR3 SINE MIR 6 173 -35 318 256 32 109 chr2 121880154 121880310 -131376273 - L2 LINE L2 -47 3266 3123 339 295 11 11 chr2 121880562 121880657 -131375926 + MIR3 SINE MIR 104 198 -10 205 286 0 0 chr2 121881231 121881280 -131375303 + MIR SINE MIR 102 150 -112 220 271 121 29 chr2 121882234 121882374 -131374209 + L2 LINE L2 2932 3084 -188 447 280 70 55 chr2 121882639 121883151 -131373432 - MLT1G1 LTR MaLR -12 583 1 454 263 52 43 chr2 121883933 121884112 -131372471 + MIR SINE MIR 4 180 -55 1855 142 0 55 chr2 121884122 121884431 -131372152 - AluJb SINE Alu -19 293 2 202 353 39 20 chr2 121884752 121884854 -131371729 + MIR SINE MIR 48 151 -111 1587 168 6 53 chr2 121884891 121885213 -131371370 + AluJo SINE Alu 2 308 -4 827 90 66 0 chr2 121885227 121885393 -131371190 + GA-rich Low_complexity Low_complexity 4 180 0 309 118 0 0 chr2 121885394 121885445 -131371138 + (GGGA)n Simple_repeat Simple_repeat 4 54 0 1313 71 11 11 chr2 121885553 121885821 -131370762 + (GAAA)n Simple_repeat Simple_repeat 2 269 0 230 179 18 0 chr2 121886037 121886093 -131370490 + (CA)n Simple_repeat Simple_repeat 2 58 0 383 332 25 19 chr2 121886292 121886465 -131370118 + MER5A DNA MER1_type 5 188 -1 2529 49 7 3 chr2 121886468 121886774 -131369809 + AluY SINE Alu 1 307 -4 254 273 125 29 chr2 121886776 121886956 -131369627 - MIR3 SINE MIR -65 143 10 * 304 344 57 0 chr2 121886890 121887012 -131369571 + MIR SINE MIR 13 141 -121 191 171 0 0 chr2 121888420 121888455 -131368128 - MIR SINE MIR -12 250 216 705 224 100 12 chr2 121888725 121888895 -131367688 - MER5A DNA MER1_type -4 185 1 222 254 218 67 chr2 121889475 121889668 -131366915 + MIR SINE MIR 26 247 -15 363 254 0 0 chr2 121890165 121890330 -131366253 + (CA)n Simple_repeat Simple_repeat 2 166 0 1555 246 51 2 chr2 121890617 121891028 -131365555 - LTR16A LTR ERVL -2 448 18 370 284 111 24 chr2 121891339 121891569 -131365014 - MIR3 SINE MIR 0 262 13 932 247 71 0 chr2 121891812 121892051 -131364532 + MIR SINE MIR 1 256 -6 1486 269 124 29 chr2 121892107 121892832 -131363751 - L2 LINE L2 -1079 2235 1442 196 256 93 23 chr2 121892863 121892949 -131363634 - MIR SINE MIR -108 154 63 218 32 32 0 chr2 121893055 121893086 -131363497 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 514 258 97 7 chr2 121894294 121894449 -131362134 + MIR SINE MIR 57 225 -37 760 263 31 22 chr2 121895410 121895638 -131360945 + MIR SINE MIR 33 262 0 226 381 70 49 chr2 121896027 121896415 -131360168 + L2 LINE L2 2845 3240 -32 1697 161 7 7 chr2 121898172 121898445 -131358138 + AluJo SINE Alu 10 282 -30 892 118 0 13 chr2 121898448 121898600 -131357983 + (GAAA)n Simple_repeat Simple_repeat 2 151 0 42931 39 22 2 chr2 121898910 121904935 -131351648 + L1PA3 LINE L1 3 6155 0 1477 305 93 23 chr2 121905124 121905874 -131350709 - L2 LINE L2 -385 2929 2127 432 264 184 17 chr2 121906004 121906178 -131350405 + MIR SINE MIR 1 203 -59 193 360 45 0 chr2 121906959 121907070 -131349513 + L2 LINE L2 2925 3040 -232 275 342 110 7 chr2 121907654 121907809 -131348774 + MIR SINE MIR 75 245 -17 261 362 61 31 chr2 121908151 121908314 -131348269 + MIR SINE MIR 21 188 -74 233 200 132 90 chr2 121908394 121908568 -131348015 - Charlie8 DNA MER1_type -1015 1402 117 705 224 100 12 chr2 121909093 121909263 -131347320 - MER5A DNA MER1_type -4 185 1 222 254 218 67 chr2 121909843 121910036 -131346547 + MIR SINE MIR 26 247 -15 363 254 0 0 chr2 121910533 121910698 -131345885 + (CA)n Simple_repeat Simple_repeat 2 166 0 1555 246 51 2 chr2 121910985 121911396 -131345187 - LTR16A LTR ERVL -2 448 18 370 284 111 24 chr2 121911707 121911937 -131344646 - MIR3 SINE MIR 0 262 13 932 247 71 0 chr2 121912180 121912419 -131344164 + MIR SINE MIR 1 256 -6 1487 270 123 29 chr2 121912475 121913201 -131343382 - L2 LINE L2 -1079 2235 1442 196 256 93 23 chr2 121913232 121913318 -131343265 - MIR SINE MIR -108 154 63 514 258 97 7 chr2 121914658 121914813 -131341770 + MIR SINE MIR 57 225 -37 760 263 31 22 chr2 121915774 121916002 -131340581 + MIR SINE MIR 33 262 0 222 392 64 44 chr2 121916391 121916779 -131339804 + L2 LINE L2 2845 3240 -32 1757 153 7 14 chr2 121918536 121918998 -131337585 + AluJo SINE Alu 10 469 0 43313 37 22 1 chr2 121919270 121925295 -131331288 + L1PA3 LINE L1 3 6155 0 201 226 0 38 chr2 121925353 121925406 -131331177 + (CAT)n Simple_repeat Simple_repeat 3 53 0 244 184 71 113 chr2 121925629 121925770 -131330813 - L1ME4a LINE L1 -1 6120 5986 198 111 0 89 chr2 121926356 121926401 -131330182 + L2 LINE L2 3020 3060 -253 222 37 0 0 chr2 121926636 121926663 -131329920 + (CA)n Simple_repeat Simple_repeat 2 28 0 308 259 89 74 chr2 121928241 121928376 -131328207 + L2 LINE L2 3125 3261 -11 1664 170 0 4 chr2 121928815 121929091 -131327492 - AluJo SINE Alu -37 275 1 928 287 103 17 chr2 121929227 121929645 -131326938 - LTR16A LTR ERVL 0 457 2 714 360 51 15 chr2 121929812 121930337 -131326246 - ERVL LTR ERVL -441 5323 4780 1263 299 27 18 chr2 121930409 121930853 -131325730 - ERVL LTR ERVL -1047 4607 4160 3445 345 66 24 chr2 121930982 121931062 -131325521 - ERVL LTR ERVL -1808 3956 3881 561 88 0 0 chr2 121931062 121931142 -131325441 + (TA)n Simple_repeat Simple_repeat 2 81 0 3445 345 66 24 chr2 121931142 121932324 -131324259 - ERVL LTR ERVL -1883 3881 2750 2319 123 47 33 chr2 121932324 121932683 -131323900 + THE1B LTR MaLR 1 364 0 12467 96 8 1 chr2 121932683 121934253 -131322330 + THE1B-int LTR MaLR 1 1580 0 2288 110 51 37 chr2 121934255 121934610 -131321973 + THE1B LTR MaLR 5 364 0 3445 345 66 24 chr2 121934610 121936392 -131320191 - ERVL LTR ERVL -3014 2750 644 325 305 29 0 chr2 121936874 121936979 -131319604 - ERVL LTR ERVL -4888 108 1 788 262 50 80 chr2 121936991 121937414 -131319169 - LTR16A LTR ERVL -40 410 1 205 245 38 0 chr2 121937691 121937744 -131318839 + A-rich Low_complexity Low_complexity 3 57 0 231 207 69 0 chr2 121938934 121938992 -131317591 - MLT1J LTR MaLR -213 298 237 699 39 53 24 chr2 121939429 121939640 -131316943 + (TA)n Simple_repeat Simple_repeat 1 217 0 1141 265 59 39 chr2 121939640 121940081 -131316502 + MER74A LTR ERVL 24 473 -85 259 303 97 23 chr2 121939935 121940110 -131316473 - MER88 LTR ERVL -198 266 79 * 208 268 84 0 chr2 121940939 121941010 -131315573 - MER5C DNA MER1_type 0 324 248 258 290 60 40 chr2 121941126 121941226 -131315357 - MER5C DNA MER1_type -202 122 21 493 278 68 26 chr2 121942957 121943148 -131313435 - MIR SINE MIR -44 218 20 295 285 55 19 chr2 121943152 121943271 -131313312 + MIR3 SINE MIR 34 156 -52 884 291 118 41 chr2 121943273 121943740 -131312843 + MLT1J LTR MaLR 2 504 -7 203 0 0 36 chr2 121944814 121944842 -131311741 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 803 304 27 14 chr2 121944843 121945136 -131311447 - L2 LINE L2 -14 3299 3003 42886 39 23 3 chr2 121945201 121951232 -131305351 + L1PA3 LINE L1 1 6155 0 1477 305 93 23 chr2 121951421 121952171 -131304412 - L2 LINE L2 -385 2929 2127 447 259 184 17 chr2 121952301 121952475 -131304108 + MIR SINE MIR 1 203 -59 193 360 45 0 chr2 121953256 121953367 -131303216 + L2 LINE L2 2925 3040 -232 275 342 110 7 chr2 121953951 121954106 -131302477 + MIR SINE MIR 75 245 -17 261 362 61 31 chr2 121954448 121954611 -131301972 + MIR SINE MIR 21 188 -74 233 200 132 90 chr2 121954691 121954865 -131301718 - Charlie8 DNA MER1_type -1026 1391 117 1962 149 10 0 chr2 121955267 121955569 -131301014 - AluJb SINE Alu -3 309 5 733 204 0 36 chr2 121955575 121955742 -131300841 + MER5B DNA MER1_type 17 177 -1 2126 160 56 48 chr2 121956136 121956598 -131299985 + L1MA9 LINE L1 5847 6312 0 185 399 89 6 chr2 121956766 121956924 -131299659 + MIR3 SINE MIR 30 200 -8 260 309 83 42 chr2 121958195 121958363 -131298220 - MIR SINE MIR -65 197 23 180 348 0 0 chr2 121958405 121958451 -131298132 + L2 LINE L2 3211 3256 -16 2537 50 3 10 chr2 121958834 121959137 -131297446 + AluY SINE Alu 1 301 -10 1065 229 23 0 chr2 121959181 121959395 -131297188 + MER20 DNA MER1_type 1 219 0 887 174 96 0 chr2 121960209 121960376 -131296207 + MER5A DNA MER1_type 1 183 -6 396 255 160 11 chr2 121960988 121961176 -131295407 - MLT1K LTR MaLR -246 342 127 2181 103 3 3 chr2 121961428 121961718 -131294865 + AluSc SINE Alu 1 290 -19 231 240 0 0 chr2 121961857 121961907 -131294676 + (TAA)n Simple_repeat Simple_repeat 2 51 0 587 233 244 10 chr2 121961920 121962113 -131294470 - MIR SINE MIR -22 240 3 666 282 50 30 chr2 121962289 121963054 -131293529 + L1MC4a LINE L1 5086 5620 -544 33 43 0 0 chr2 121963256 121963303 -131293280 + AT_rich Low_complexity Low_complexity 1 47 0 346 286 20 0 chr2 121964112 121964210 -131292373 + MIR3 SINE MIR 85 184 -24 307 337 70 6 chr2 121964526 121964698 -131291885 + MIR SINE MIR 64 246 -16 25 0 0 0 chr2 121965300 121965325 -131291258 + AT_rich Low_complexity Low_complexity 1 25 0 441 157 174 17 chr2 121965539 121965654 -131290929 + LTR16A1 LTR ERVL 325 457 0 437 295 31 16 chr2 121966089 121966218 -131290365 - L2 LINE L2 0 3272 3142 585 174 97 14 chr2 121966711 121966855 -131289728 - LTR16A1 LTR ERVL 0 457 302 3303 134 12 6 chr2 121966988 121967479 -131289104 - LOR1a LTR ERV1 -3 494 1 1806 152 13 10 chr2 121967830 121968139 -131288444 + L1MC1 LINE L1 5319 5628 -705 1271 172 32 9 chr2 121968139 121968348 -131288235 + L1MC1 LINE L1 6107 6332 -1 275 191 248 9 chr2 121969400 121969505 -131287078 - L2 LINE L2 -257 3056 2927 2977 161 71 17 chr2 121969507 121970102 -131286481 + L1MB8 LINE L1 5552 6178 0 180 0 0 0 chr2 121970878 121970898 -131285685 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 550 251 205 5 chr2 121971812 121972007 -131284576 + MIR SINE MIR 23 256 -6 469 270 80 31 chr2 121972507 121972670 -131283913 - MIR SINE MIR -82 180 10 2322 78 3 0 chr2 121972727 121973010 -131283573 + AluY SINE Alu 1 284 -27 229 324 143 19 chr2 121973362 121973467 -131283116 - L2 LINE L2 -9 3263 3146 183 320 64 13 chr2 121973629 121973707 -131282876 - L2 LINE L2 -257 3015 2934 1027 185 19 33 chr2 121973722 121973933 -131282650 + AluJo SINE Alu 89 296 -16 222 288 14 14 chr2 121974165 121974238 -131282345 + MIR SINE MIR 19 91 -171 1642 240 3 6 chr2 121974774 121975112 -131281471 - MER58B DNA MER1_type -1 340 4 187 323 43 21 chr2 121975148 121975241 -131281342 - MIR3 SINE MIR -27 181 87 225 0 0 0 chr2 121976226 121976251 -131280332 + (GA)n Simple_repeat Simple_repeat 2 26 0 14782 128 38 31 chr2 121976255 121977545 -131279038 + Tigger1 DNA MER2_type 1 1314 -1104 2400 140 16 24 chr2 121977545 121977923 -131278660 + THE1C LTR MaLR 1 375 0 14782 128 38 31 chr2 121977923 121979027 -131277556 + Tigger1 DNA MER2_type 1314 2410 -8 180 0 0 0 chr2 121979027 121979047 -131277536 + (TA)n Simple_repeat Simple_repeat 1 20 0 1078 166 49 40 chr2 121979514 121979761 -131276822 + L1PA16 LINE L1 5914 6162 -4 410 272 18 18 chr2 121980133 121980247 -131276336 - L2 LINE L2 -3 3310 3197 471 267 69 59 chr2 121980532 121980734 -131275849 - MIR SINE MIR -22 240 37 234 263 13 90 chr2 121982122 121982278 -131274305 + L2 LINE L2 2917 3060 -212 4141 224 136 25 chr2 121983221 121983414 -131273169 + L1MDa LINE L1 11 181 -6359 195 100 0 0 chr2 121983414 121983444 -131273139 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 4141 224 136 25 chr2 121983444 121984556 -131272027 + L1MDa LINE L1 181 1462 -5078 287 83 0 21 chr2 121984599 121984647 -131271936 + (TG)n Simple_repeat Simple_repeat 2 48 0 369 138 0 164 chr2 121984653 121984769 -131271814 + L1MD1 LINE L1 6146 6242 0 614 329 24 0 chr2 121984986 121985196 -131271387 - MIR SINE MIR -6 256 42 6551 101 6 6 chr2 121985201 121986351 -131270232 + L1PA13 LINE L1 5012 6161 -2 308 356 83 17 chr2 121987066 121987246 -131269337 + L1ME4a LINE L1 5400 5591 -530 599 256 205 19 chr2 121987264 121987639 -131268944 + L1ME4a LINE L1 5675 6119 -2 219 130 0 43 chr2 121988086 121988132 -131268451 + (CAAAAA)n Simple_repeat Simple_repeat 2 45 0 23 33 0 0 chr2 121988897 121988927 -131267656 + AT_rich Low_complexity Low_complexity 1 30 0 271 390 76 5 chr2 121989008 121989218 -131267365 - MIR SINE MIR -34 228 4 264 200 0 0 chr2 121990038 121990093 -131266490 - L1PB4 LINE L1 0 6156 6102 228 222 32 0 chr2 121990275 121990338 -131266245 + (TA)n Simple_repeat Simple_repeat 1 65 0 220 282 64 13 chr2 121991622 121991700 -131264883 - L2 LINE L2 -5 3267 3186 1357 153 5 14 chr2 121991705 121991927 -131264656 - AluSg/x SINE Alu -12 298 79 687 322 85 31 chr2 121992249 121992555 -131264028 + MLT1L LTR MaLR 128 469 -146 1220 116 156 0 chr2 121992555 121992754 -131263829 - MER30 DNA MER1_type 0 230 1 687 322 85 31 chr2 121992754 121992904 -131263679 + MLT1L LTR MaLR 469 609 -6 691 255 22 27 chr2 121993637 121993821 -131262762 - MIR SINE MIR -70 192 10 253 204 0 0 chr2 121993935 121993984 -131262599 - L2 LINE L2 -8 3264 3216 180 89 44 22 chr2 121994888 121994933 -131261650 + CT-rich Low_complexity Low_complexity 2 47 0 222 315 102 31 chr2 121995004 121995131 -131261452 + L3 LINE CR1 631 766 -811 647 165 17 108 chr2 121995138 121995314 -131261269 - MER6B DNA MER2_type -48 162 3 221 244 0 0 chr2 121995959 121996004 -131260579 - L3 LINE CR1 -7 1570 1526 1909 205 71 53 chr2 121996045 121996538 -131260045 + MLT1D LTR MaLR 4 505 0 495 272 94 47 chr2 121996554 121996745 -131259838 - MIR SINE MIR -58 204 5 303 302 47 17 chr2 121996839 121997011 -131259572 - MER112 DNA MER1_type -83 177 1 464 292 146 60 chr2 121998074 121998540 -131258043 + L2 LINE L2 2273 2778 -536 296 281 55 60 chr2 121998789 121998988 -131257595 + L2 LINE L2 3116 3313 0 528 217 105 21 chr2 121999224 121999367 -131257216 + L1ME1 LINE L1 5991 6145 -21 1150 171 57 19 chr2 121999988 122000199 -131256384 - MER20 DNA MER1_type 0 219 1 34 0 0 0 chr2 122000232 122000266 -131256317 + AT_rich Low_complexity Low_complexity 1 34 0 420 309 137 11 chr2 122000536 122000711 -131255872 - L3 LINE CR1 -65 1512 1316 716 191 21 28 chr2 122000737 122000878 -131255705 - LTR12 LTR ERV1 -216 498 359 327 208 0 0 chr2 122000878 122000950 -131255633 - LTR30 LTR ERV1 -98 624 553 1442 150 13 23 chr2 122000954 122001227 -131255356 - LTR12 LTR ERV1 -408 2030 55 258 231 0 0 chr2 122001229 122001281 -131255302 - LTR30 LTR ERV1 -670 52 1 274 330 0 0 chr2 122001745 122001848 -131254735 + GA-rich Low_complexity Low_complexity 2 104 0 2089 114 6 25 chr2 122003365 122003680 -131252903 + AluSx SINE Alu 1 309 -3 226 212 30 61 chr2 122003735 122003801 -131252782 - L2 LINE L2 0 3313 3250 254 227 91 0 chr2 122004899 122004965 -131251618 - MIR SINE MIR -107 155 84 1740 232 47 45 chr2 122005168 122005677 -131250906 + MER74A LTR ERVL 5 514 -44 935 312 56 33 chr2 122006268 122006694 -131249889 + MLT1J LTR MaLR 35 470 -41 445 327 19 13 chr2 122007277 122007433 -131249150 + MIR SINE MIR 17 173 -89 356 165 19 29 chr2 122007872 122007975 -131248608 + GA-rich Low_complexity Low_complexity 2 103 0 231 152 0 0 chr2 122007974 122008020 -131248563 + (TAG)n Simple_repeat Simple_repeat 2 47 0 * 801 237 125 18 chr2 122008100 122008485 -131248098 - LTR33 LTR ERVL 0 521 1 2136 157 91 140 chr2 122008649 122009031 -131247552 - MLT1F1 LTR MaLR 0 567 223 2302 88 14 0 chr2 122009031 122009326 -131247257 - AluSx SINE Alu 0 312 14 2136 157 91 140 chr2 122009326 122009537 -131247046 - MLT1F1 LTR MaLR -344 223 3 183 100 0 0 chr2 122009946 122009976 -131246607 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 509 267 58 23 chr2 122011313 122011485 -131245098 + LTR16A1 LTR ERVL 280 457 0 2204 123 0 0 chr2 122011603 122011905 -131244678 + AluSc SINE Alu 1 302 -7 1011 268 48 69 chr2 122012037 122012455 -131244128 - MLT1I LTR MaLR 0 409 1 447 315 61 20 chr2 122012634 122012831 -131243752 + MIR SINE MIR 2 206 -56 247 409 63 0 chr2 122012931 122013073 -131243510 - L2 LINE L2 -1 3271 3121 242 261 225 18 chr2 122015476 122015587 -131240996 - MIR SINE MIR -8 254 121 216 135 0 0 chr2 122015736 122015773 -131240810 + (CA)n Simple_repeat Simple_repeat 1 37 0 510 173 55 80 chr2 122015811 122016048 -131240535 + L1MC5 LINE L1 5752 5982 -1826 25 0 0 0 chr2 122016173 122016198 -131240385 + AT_rich Low_complexity Low_complexity 1 25 0 1149 253 61 30 chr2 122016853 122017216 -131239367 + L1MC5 LINE L1 7158 7531 -430 2172 186 46 78 chr2 122017564 122017758 -131238825 + MLT1D LTR MaLR 1 200 -305 2080 117 0 0 chr2 122017758 122018070 -131238513 - AluSx SINE Alu 0 312 1 2172 186 46 78 chr2 122018070 122018396 -131238187 + MLT1D LTR MaLR 200 505 0 1278 221 4 24 chr2 122018908 122019104 -131237479 - MLT1A1 LTR MaLR -1 364 173 2488 127 8 27 chr2 122019104 122019475 -131237108 - THE1B LTR MaLR 0 364 1 1278 221 4 24 chr2 122019475 122019532 -131237051 - MLT1A1 LTR MaLR -192 173 116 513 152 8 37 chr2 122020561 122020692 -131235891 - MER20 DNA MER1_type -1 218 1 2681 175 42 12 chr2 122020733 122021230 -131235353 - MER34 LTR ERV1 -4 538 27 827 235 33 0 chr2 122021776 122021959 -131234624 + MER5A DNA MER1_type 1 189 0 349 269 337 0 chr2 122022682 122022857 -131233726 + MIR SINE MIR 26 259 -3 930 204 0 0 chr2 122023077 122023253 -131233330 + L1MB1 LINE L1 5990 6165 -3 340 307 0 10 chr2 122023293 122023394 -131233189 - MIR SINE MIR -160 102 3 366 259 215 0 chr2 122023679 122023814 -131232769 + MIR SINE MIR 92 255 -7 196 133 0 0 chr2 122023856 122023886 -131232697 + L2 LINE L2 3261 3290 -23 218 125 0 0 chr2 122024656 122024688 -131231895 + L2 LINE L2 3227 3258 -14 2497 89 0 0 chr2 122025533 122025837 -131230746 + AluSg SINE Alu 2 305 -5 18505 139 38 14 chr2 122026090 122029039 -131227544 + L1M1 LINE L1 13 3030 -4535 4504 119 30 4 chr2 122029041 122029720 -131226863 + L1MA3 LINE L1 5609 6304 -1 263 273 30 40 chr2 122030043 122030142 -131226441 + MIR3 SINE MIR 63 160 -48 937 195 82 10 chr2 122030142 122030337 -131226246 + MER58A DNA MER1_type 1 209 -15 2269 112 0 7 chr2 122030352 122030657 -131225926 + AluSg SINE Alu 1 303 -7 604 254 190 57 chr2 122030747 122031184 -131225399 - MLT1K LTR MaLR -6 582 88 1202 144 52 0 chr2 122031294 122031488 -131225095 + L1PA16 LINE L1 5963 6166 0 293 258 56 0 chr2 122032308 122032397 -131224186 - MIR SINE MIR -43 219 126 952 146 12 2 chr2 122032724 122032892 -131223691 + MLT1B LTR MaLR 255 390 0 355 278 16 40 chr2 122034610 122034764 -131221819 + MIR SINE MIR 2 150 -65 296 272 75 54 chr2 122035174 122035321 -131221262 + MER89 LTR ERV1 383 532 -27 2468 155 46 17 chr2 122036280 122036694 -131219889 + MSTB LTR MaLR 1 426 0 464 135 4 256 chr2 122036747 122036977 -131219606 - MER91B DNA MER1_type -11 179 8 226 283 46 123 chr2 122038389 122038608 -131217975 - MIR SINE MIR -59 203 2 293 228 24 16 chr2 122038635 122038762 -131217821 + GA-rich Low_complexity Low_complexity 5 132 0 261 230 19 0 chr2 122038945 122039054 -131217529 + GA-rich Low_complexity Low_complexity 1 111 0 7275 40 1 1 chr2 122040006 122040864 -131215719 - L1PA5 LINE L1 0 6154 5297 2188 50 4 0 chr2 122040861 122041140 -131215443 + L1PA5 LINE L1 5015 5294 -852 * 204 40 0 0 chr2 122041270 122041295 -131215288 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 213 39 0 0 chr2 122041373 122041399 -131215184 + (TC)n Simple_repeat Simple_repeat 1 26 0 274 294 82 38 chr2 122042429 122042613 -131213970 - L1MC4a LINE L1 -1882 5926 5735 295 290 90 20 chr2 122043483 122043583 -131213000 + L2 LINE L2 3156 3262 -10 217 308 28 37 chr2 122044074 122044181 -131212402 + MIR SINE MIR 59 164 -98 1066 215 4 0 chr2 122044291 122044552 -131212031 + L1MA4 LINE L1 6028 6289 -11 529 284 74 47 chr2 122044586 122044905 -131211678 + MLT1G LTR MaLR 2 295 -300 2353 111 19 8 chr2 122044999 122045367 -131211216 - LTR57 LTR ERVL -39 372 1 332 192 74 9 chr2 122045372 122045581 -131211002 + MLT1F1 LTR MaLR 313 555 0 14403 27 1 0 chr2 122045676 122048198 -131208385 + L1PA2 LINE L1 3680 6202 0 261 163 0 0 chr2 122048323 122048372 -131208211 + (TGGA)n Simple_repeat Simple_repeat 1 49 0 252 320 82 0 chr2 122048612 122048709 -131207874 + L2 LINE L2 3161 3265 -48 714 239 148 13 chr2 122049198 122049428 -131207155 - MIR SINE MIR 0 262 2 584 244 92 39 chr2 122049807 122050090 -131206493 + MLT1I LTR MaLR 9 306 -103 247 250 62 9 chr2 122050131 122050243 -131206340 - L1MC4 LINE L1 -1 8041 7924 427 143 13 0 chr2 122050449 122050526 -131206057 + MLT1I LTR MaLR 332 409 0 2767 262 58 47 chr2 122050876 122051827 -131204756 + L2 LINE L2 1969 2929 -385 330 208 117 0 chr2 122052377 122052454 -131204129 + MIR3 SINE MIR 122 207 -1 217 305 37 0 chr2 122053049 122053131 -131203452 + L2 LINE L2 3227 3311 -2 2277 96 0 37 chr2 122054137 122054459 -131202124 + AluSx SINE Alu 1 310 -2 2404 99 0 0 chr2 122054476 122054779 -131201804 + AluSq SINE Alu 1 303 -10 489 295 18 30 chr2 122056586 122056752 -131199831 + MER5B DNA MER1_type 15 178 0 1372 250 113 19 chr2 122056776 122057275 -131199308 + MLT1G1 LTR MaLR 11 595 0 1050 191 52 20 chr2 122057788 122058040 -131198543 - MLT1B LTR MaLR -130 260 1 207 145 101 72 chr2 122058198 122058267 -131198316 - MIR SINE MIR -55 207 137 303 304 105 21 chr2 122058277 122058300 -131198283 - MIR SINE MIR -19 189 169 1527 135 10 66 chr2 122058300 122058604 -131197979 - L1PA16 LINE L1 -7 6159 5873 303 304 105 21 chr2 122058604 122058739 -131197844 - MIR SINE MIR -39 169 7 3426 70 2 2 chr2 122058799 122059253 -131197330 + L1PA8 LINE L1 5719 6172 0 1336 225 152 8 chr2 122059398 122059793 -131196790 - MER31B LTR ERV1 -14 452 1 3110 139 9 42 chr2 122060576 122060943 -131195640 + L1PA16 LINE L1 5607 5950 -216 1889 137 13 48 chr2 122060943 122061256 -131195327 + AluSx SINE Alu 1 302 -10 3110 139 9 42 chr2 122061256 122061462 -131195121 + L1PA16 LINE L1 5950 6161 -5 27 0 0 0 chr2 122061989 122062016 -131194567 + AT_rich Low_complexity Low_complexity 1 27 0 23937 36 3 1 chr2 122062033 122065742 -131190841 - L1PA3 LINE L1 0 6155 2440 207 204 0 23 chr2 122065890 122065934 -131190649 + GA-rich Low_complexity Low_complexity 2 44 0 1209 239 94 35 chr2 122066441 122066820 -131189763 + MLT2B1 LTR ERVL 1 522 -32 420 82 0 0 chr2 122066820 122066881 -131189702 + (CA)n Simple_repeat Simple_repeat 1 61 0 1209 239 94 35 chr2 122066881 122066914 -131189669 + MLT2B1 LTR ERVL 522 552 -2 280 221 43 36 chr2 122066953 122067093 -131189490 + (CAGA)n Simple_repeat Simple_repeat 2 142 0 183 218 0 0 chr2 122067103 122067158 -131189425 + (CAGAGA)n Simple_repeat Simple_repeat 4 58 0 381 178 263 8 chr2 122067485 122067603 -131188980 + MER5B DNA MER1_type 19 166 -12 533 308 59 0 chr2 122067808 122067977 -131188606 - MIR SINE MIR -48 214 36 21 36 0 0 chr2 122068315 122068343 -131188240 + AT_rich Low_complexity Low_complexity 1 28 0 352 237 27 73 chr2 122068810 122068961 -131187622 + L1ME3A LINE L1 4396 4542 -1604 270 165 55 142 chr2 122069077 122069204 -131187379 + MER106B DNA MER1_type 944 1059 0 428 299 97 29 chr2 122069217 122069330 -131187253 + L1ME3A LINE L1 4533 4637 -1509 216 0 0 0 chr2 122069330 122069354 -131187229 + (TG)n Simple_repeat Simple_repeat 1 24 0 428 299 97 29 chr2 122069354 122069651 -131186932 + L1ME3A LINE L1 4637 4971 -1175 863 170 28 0 chr2 122069707 122069848 -131186735 + MER5A DNA MER1_type 1 145 -44 622 269 30 23 chr2 122069895 122070257 -131186326 + L1ME3A LINE L1 5149 5514 -650 494 193 9 35 chr2 122070258 122070372 -131186211 - MER58 DNA MER1_type 0 2420 2310 714 288 94 23 chr2 122070788 122071181 -131185402 + L1ME3A LINE L1 5507 5927 -243 254 320 29 10 chr2 122071428 122071531 -131185052 + MER58 DNA MER1_type 175 279 -2141 193 200 0 0 chr2 122072147 122072187 -131184396 - L2 LINE L2 0 3272 3233 738 181 49 14 chr2 122073062 122073206 -131183377 - FRAM SINE Alu -26 150 2 2239 116 0 0 chr2 122073282 122073592 -131182991 + AluSx SINE Alu 1 310 -2 194 341 68 30 chr2 122073999 122074131 -131182452 - L3 LINE CR1 -11 1566 1430 41798 38 3 2 chr2 122074195 122080333 -131176250 + L1PA3 LINE L1 1 6148 -7 21 36 0 0 chr2 122080603 122080631 -131175952 + AT_rich Low_complexity Low_complexity 1 28 0 1895 192 19 3 chr2 122080722 122081081 -131175502 + MLT1A1 LTR MaLR 1 365 0 1747 193 0 7 chr2 122081387 122081692 -131174891 + AluJo SINE Alu 1 303 -9 235 301 38 65 chr2 122082570 122082582 -131174001 + MER5A DNA MER1_type 9 20 -169 2225 143 21 13 chr2 122082582 122082954 -131173629 - THE1C LTR MaLR 0 375 1 235 301 38 65 chr2 122082954 122083127 -131173456 + MER5A DNA MER1_type 20 189 0 581 283 121 49 chr2 122083528 122083621 -131172962 + L2 LINE L2 1992 2077 -1237 736 147 98 71 chr2 122083621 122083728 -131172855 - MER5A DNA MER1_type 0 189 73 2302 122 0 0 chr2 122083728 122084031 -131172552 - AluSx SINE Alu -9 303 1 736 147 98 71 chr2 122084031 122084107 -131172476 - MER5A DNA MER1_type -116 73 1 581 283 121 49 chr2 122084107 122084444 -131172139 + L2 LINE L2 2077 2453 -861 6246 34 0 3 chr2 122084453 122085237 -131171346 - L1PA4 LINE L1 -3 6152 5371 29 0 0 0 chr2 122085330 122085359 -131171224 + AT_rich Low_complexity Low_complexity 1 29 0 762 102 8 8 chr2 122085374 122085492 -131171091 - L1MA2 LINE L1 -11 6293 6176 206 338 15 0 chr2 122085533 122085601 -131170982 + L2 LINE L2 2543 2611 -703 2455 161 20 14 chr2 122085602 122086048 -131170535 - MSTB2 LTR MaLR 0 457 9 185 390 26 0 chr2 122086413 122086490 -131170093 + L2 LINE L2 2974 3052 -220 1447 261 21 14 chr2 122086504 122086940 -131169643 - MER20B DNA MER1_type -6 777 339 720 236 114 54 chr2 122087189 122087469 -131169114 - MER20B DNA MER1_type -474 309 13 285 363 32 16 chr2 122087581 122087705 -131168878 + L2 LINE L2 3145 3270 -2 528 137 32 16 chr2 122087956 122088080 -131168503 + CT-rich Low_complexity Low_complexity 1 126 0 1733 159 4 0 chr2 122088081 122088338 -131168245 - AluJo SINE Alu -54 258 1 349 309 230 29 chr2 122088948 122089369 -131167214 + HAL1 LINE L1 1994 2499 -8 1753 157 6 55 chr2 122089370 122089682 -131166901 - AluJo SINE Alu -15 297 1 2196 117 3 0 chr2 122089802 122090111 -131166472 + AluSx SINE Alu 2 311 -1 215 364 10 10 chr2 122090971 122091070 -131165513 - L2 LINE L2 -1 3312 3214 733 241 17 11 chr2 122091195 122091369 -131165214 - MIR SINE MIR -8 254 80 7217 68 0 1 chr2 122092030 122093753 -131162830 + L1PA6 LINE L1 4434 6154 0 2090 97 3 42 chr2 122094679 122094989 -131161594 - AluSq SINE Alu -3 310 13 2379 84 3 3 chr2 122095014 122095324 -131161259 - AluY SINE Alu -1 310 1 24 32 0 0 chr2 122095401 122095432 -131161151 + AT_rich Low_complexity Low_complexity 1 31 0 568 321 42 5 chr2 122096587 122096777 -131159806 - MIR SINE MIR -52 210 14 200 130 22 0 chr2 122096966 122097012 -131159571 + (TA)n Simple_repeat Simple_repeat 1 47 0 187 318 110 97 chr2 122097198 122097497 -131159086 - L2 LINE L2 0 3272 2970 230 339 113 50 chr2 122098235 122098474 -131158109 + L2 LINE L2 2437 2690 -624 224 314 0 0 chr2 122098470 122098521 -131158062 - L2 LINE L2 -14 3258 3208 * 184 324 73 37 chr2 122098542 122098678 -131157905 + L2 LINE L2 3173 3313 0 318 167 0 17 chr2 122099188 122099248 -131157335 + L1MD3 LINE L1 7730 7788 -207 282 143 0 0 chr2 122099237 122099279 -131157304 - L1PA8A LINE L1 -1169 4977 4936 * 2862 86 0 8 chr2 122099276 122099796 -131156787 + L1PA8A LINE L1 4975 5491 -640 43134 35 22 6 chr2 122099797 122105831 -131150752 + L1PA2 LINE L1 22 6155 0 5254 85 0 3 chr2 122105831 122106485 -131150098 + L1PA8A LINE L1 5476 6131 0 1086 162 95 0 chr2 122106495 122106705 -131149878 + L1MD3 LINE L1 7765 7994 -1 327 326 30 37 chr2 122107152 122107287 -131149296 + L2 LINE L2 3138 3271 -1 2173 126 7 0 chr2 122107902 122108212 -131148371 + AluSp SINE Alu 1 312 -1 316 324 46 73 chr2 122108300 122108519 -131148064 + L2 LINE L2 3054 3266 -6 236 198 148 0 chr2 122109210 122109291 -131147292 + L1MC4 LINE L1 6613 6705 -1337 21 0 0 0 chr2 122109707 122109728 -131146855 + AT_rich Low_complexity Low_complexity 1 21 0 264 250 103 60 chr2 122109853 122110085 -131146498 - MER112 DNA MER1_type -11 249 8 1124 227 0 5 chr2 122110125 122110418 -131146165 + MER2 DNA MER2_type 1 344 -1 6162 128 116 18 chr2 122111822 122112943 -131143640 - Tigger3b DNA MER2_type 0 1231 1 704 171 360 0 chr2 122114287 122114451 -131142132 + MER58A DNA MER1_type 2 224 0 243 0 0 0 chr2 122114689 122114716 -131141867 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 880 138 0 0 chr2 122114722 122114838 -131141745 - FLAM_C SINE Alu -17 116 1 202 326 0 0 chr2 122115933 122116022 -131140561 + T-rich Low_complexity Low_complexity 1 89 0 533 272 0 0 chr2 122116349 122116463 -131140120 - MER81 DNA DNA 0 114 1 672 258 40 0 chr2 122116469 122116620 -131139963 + MER20 DNA MER1_type 56 212 -7 21 0 0 0 chr2 122116901 122116922 -131139661 + AT_rich Low_complexity Low_complexity 1 21 0 294 180 8 117 chr2 122118661 122118676 -131137907 - L1MA7 LINE L1 -1 6290 6276 1060 214 77 19 chr2 122118676 122119109 -131137474 - L1ME1 LINE L1 -5 6161 5509 3654 220 98 47 chr2 122119109 122120501 -131136082 - L1ME1 LINE L1 -1401 4745 3284 252 0 0 0 chr2 122122050 122122078 -131134505 + (T)n Simple_repeat Simple_repeat 1 28 0 186 43 0 0 chr2 122123337 122123360 -131133223 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 6994 60 15 0 chr2 122123361 122124241 -131132342 - L1PA5 LINE L1 -8 6146 5254 1184 35 35 0 chr2 122124245 122124389 -131132194 + L1PA5 LINE L1 5124 5272 -874 248 303 45 0 chr2 122124409 122124498 -131132085 + L2 LINE L2 3137 3229 -43 22 0 0 0 chr2 122126989 122127011 -131129572 + AT_rich Low_complexity Low_complexity 1 22 0 1116 136 173 0 chr2 122128662 122128876 -131127707 + Tigger7 DNA MER2_type 2237 2487 0 334 282 0 0 chr2 122129275 122129346 -131127237 + MIR SINE MIR 11 81 -181 220 175 214 68 chr2 122129937 122130040 -131126543 - MER5A DNA MER1_type -67 122 5 1234 96 0 0 chr2 122130506 122130662 -131125921 - AluSg/x SINE Alu -23 289 134 2390 54 13 10 chr2 122130662 122130960 -131125623 - AluY SINE Alu -12 299 1 350 257 195 62 chr2 122131043 122131413 -131125170 + LTR67 LTR ERVL 121 539 -18 317 212 0 15 chr2 122131795 122131861 -131124722 + MIR3 SINE MIR 90 154 -54 1138 218 33 0 chr2 122133675 122133886 -131122697 + MER20 DNA MER1_type 1 218 -1 476 333 139 22 chr2 122134123 122134525 -131122058 - L2 LINE L2 0 3272 2824 1923 167 6 3 chr2 122135003 122135314 -131121269 + AluJb SINE Alu 1 312 0 971 270 45 84 chr2 122135433 122135918 -131120665 + MLT1J LTR MaLR 44 509 -2 1374 150 16 57 chr2 122136441 122136687 -131119896 + MER46A DNA MER2_type 1 236 0 1351 186 20 68 chr2 122136886 122137181 -131119402 + MLT1D LTR MaLR 1 281 -224 428 119 0 0 chr2 122137185 122137244 -131119339 + MLT1D LTR MaLR 445 503 -2 5766 198 39 43 chr2 122138220 122139863 -131116720 - L1M4 LINE L1 -542 5636 3997 2145 115 27 0 chr2 122139863 122140159 -131116424 - AluSx SINE Alu 0 312 9 5766 198 39 43 chr2 122140159 122140249 -131116334 - L1M4 LINE L1 -2181 3997 3908 2266 110 0 3 chr2 122140263 122140573 -131116010 - AluSx SINE Alu -3 309 1 3256 181 55 23 chr2 122141314 122142017 -131114566 + L1MB4 LINE L1 5430 6155 -25 261 139 0 0 chr2 122142028 122142071 -131114512 + (TA)n Simple_repeat Simple_repeat 2 44 0 21 0 0 0 chr2 122142078 122142099 -131114484 + AT_rich Low_complexity Low_complexity 1 21 0 354 67 300 0 chr2 122142941 122143001 -131113582 - MADE1 DNA Mariner 0 80 3 561 276 107 11 chr2 122143677 122143938 -131112645 - LTR16A LTR ERVL -101 349 64 2813 56 53 0 chr2 122143950 122144287 -131112296 + THE1A LTR MaLR 1 355 0 224 203 17 34 chr2 122144354 122144413 -131112170 + GA-rich Low_complexity Low_complexity 3 60 0 2308 100 0 3 chr2 122144819 122145119 -131111464 + AluSq SINE Alu 1 299 -14 418 132 0 88 chr2 122147090 122147181 -131109402 - L1MC/D LINE L1 -588 5745 5663 700 197 176 42 chr2 122148179 122148372 -131108211 + MER20 DNA MER1_type 1 219 0 254 310 115 35 chr2 122148491 122148604 -131107979 - L2 LINE L2 -11 3302 3181 527 164 100 0 chr2 122148656 122148766 -131107817 - MIR SINE MIR -62 200 80 476 313 50 0 chr2 122148835 122148995 -131107588 + MIR SINE MIR 76 243 -19 863 167 69 17 chr2 122149055 122149142 -131107441 + MER5A DNA MER1_type 3 84 -105 2625 149 27 5 chr2 122149142 122149544 -131107039 - LTR57 LTR ERVL 0 411 1 863 167 69 17 chr2 122149544 122149630 -131106953 + MER5A DNA MER1_type 84 185 -4 2082 154 0 0 chr2 122151374 122151680 -131104903 + AluSq SINE Alu 1 306 -7 1975 141 0 0 chr2 122151933 122152223 -131104360 + AluSx SINE Alu 20 309 -3 1535 257 26 13 chr2 122152305 122152761 -131103822 - LTR40c LTR ERVL -3 462 1 444 235 84 80 chr2 122152768 122153006 -131103577 - L2 LINE L2 0 3313 3075 1386 226 99 14 chr2 122153034 122153379 -131103204 - MLT1A2 LTR MaLR 0 374 1 357 258 214 6 chr2 122153588 122153747 -131102836 - MIR SINE MIR -3 259 68 2418 65 0 0 chr2 122153855 122154146 -131102437 + AluY SINE Alu 5 295 -16 411 262 186 9 chr2 122156940 122157115 -131099468 + MIR SINE MIR 42 239 -23 205 295 133 0 chr2 122157903 122158008 -131098575 + MIR3 SINE MIR 10 128 -80 263 219 203 62 chr2 122158616 122158744 -131097839 - MLT1I LTR MaLR -2 407 303 216 39 0 0 chr2 122158964 122158990 -131097593 - MIR SINE MIR -61 147 122 2347 95 0 0 chr2 122159096 122159392 -131097191 + AluSc SINE Alu 1 296 -13 772 227 76 42 chr2 122159884 122160148 -131096435 - ORSL DNA AcHobo -2 273 1 23 0 0 0 chr2 122160195 122160218 -131096365 + AT_rich Low_complexity Low_complexity 1 23 0 1984 131 0 5 chr2 122160218 122160390 -131096193 - L1PB3 LINE L1 -8 6146 5975 633 346 4 4 chr2 122160390 122160656 -131095927 - L1ME3 LINE L1 -237 5925 5660 378 293 96 30 chr2 122160656 122160823 -131095760 + MIR SINE MIR 14 191 -71 1844 211 67 8 chr2 122160965 122161441 -131095142 - MLT1F LTR MaLR -8 534 36 339 103 0 0 chr2 122161902 122161960 -131094623 - L1MA7 LINE L1 -1 6290 6233 13244 162 28 61 chr2 122161972 122162125 -131094458 - L1MA3 LINE L1 0 7724 7568 2332 93 0 3 chr2 122162125 122162416 -131094167 + AluSc SINE Alu 1 290 -19 13244 162 28 61 chr2 122162416 122164072 -131092511 - L1MA3 LINE L1 -156 7568 5860 1118 91 0 0 chr2 122164072 122164215 -131092368 - AluSg/x SINE Alu -10 302 160 13244 162 28 61 chr2 122164215 122165790 -131090793 - L1MA3 LINE L1 -1864 5860 4360 2139 124 0 0 chr2 122165790 122166080 -131090503 - AluSc SINE Alu -19 290 1 13244 162 28 61 chr2 122166080 122166687 -131089896 - L1MA3 LINE L1 -3364 4360 3735 2124 120 10 3 chr2 122166687 122166995 -131089588 - AluSg SINE Alu 0 310 1 700 121 14 0 chr2 122167017 122167158 -131089425 + (TCC)n Simple_repeat Simple_repeat 1 143 0 496 195 20 38 chr2 122167163 122167303 -131089280 - L1MA3 LINE L1 -3814 3751 3612 26533 47 12 6 chr2 122167327 122171841 -131084742 - L1PA4 LINE L1 0 7574 3020 760 194 43 0 chr2 122171885 122172024 -131084559 - AluSx SINE Alu -2 310 166 527 133 0 12 chr2 122172034 122172117 -131084466 + MER4A LTR ERV1 17 98 -566 1875 137 9 22 chr2 122172117 122172467 -131084116 + MER4A LTR ERV1 261 664 0 1036 183 0 0 chr2 122172467 122172636 -131083947 - AluSx SINE Alu -143 169 1 19379 132 16 4 chr2 122172636 122175487 -131081096 - L1MA3 LINE L1 -4546 3019 134 2077 181 34 31 chr2 122175487 122176038 -131080545 + MLT2A2 LTR ERVL 1 554 0 741 134 34 8 chr2 122176038 122176157 -131080426 - L1MA3 LINE L1 -7427 138 17 4906 170 22 36 chr2 122176164 122176184 -131080399 - L1MA7 LINE L1 -45 6246 6227 255 61 0 0 chr2 122176184 122176217 -131080366 + (CATA)n Simple_repeat Simple_repeat 2 34 0 4906 170 22 36 chr2 122176217 122176655 -131079928 - L1MA7 LINE L1 -64 6227 5784 195 42 0 0 chr2 122176655 122176679 -131079904 + (TA)n Simple_repeat Simple_repeat 1 24 0 4906 170 22 36 chr2 122176679 122177720 -131078863 - L1MA7 LINE L1 -507 5784 4768 2416 124 47 11 chr2 122177720 122178082 -131078501 + THE1C LTR MaLR 1 375 0 9977 111 41 42 chr2 122178082 122179655 -131076928 + THE1C-int LTR MaLR 1 1572 -8 2185 133 80 17 chr2 122179664 122180016 -131076567 + THE1C LTR MaLR 2 375 0 6135 130 28 44 chr2 122180016 122180551 -131076032 - L1MA7 LINE L1 -1374 4772 4230 2051 127 0 3 chr2 122180551 122180835 -131075748 + AluSc SINE Alu 3 285 -24 6135 130 28 44 chr2 122180835 122181421 -131075162 - L1MA7 LINE L1 -1916 4230 3669 1195 284 54 65 chr2 122183557 122184078 -131072505 - LTR40a LTR ERVL 0 519 5 430 321 18 0 chr2 122184084 122184193 -131072390 - L2 LINE L2 0 3313 3203 459 311 55 25 chr2 122184935 122185170 -131071413 + MIR SINE MIR 2 243 -19 270 0 0 0 chr2 122185264 122185294 -131071289 + (TAA)n Simple_repeat Simple_repeat 2 31 0 1945 136 30 24 chr2 122186139 122186469 -131070114 + LTR32 LTR ERVL 10 341 -130 933 155 0 7 chr2 122186480 122186635 -131069948 + LTR32 LTR ERVL 318 471 0 319 338 129 37 chr2 122187002 122187274 -131069309 - L2 LINE L2 -13 3259 2963 271 158 0 0 chr2 122187964 122188002 -131068581 + 5S rRNA rRNA 1 38 -83 10663 203 47 28 chr2 122188033 122190990 -131065593 - L1MC1 LINE L1 -6 6607 3590 2266 108 0 0 chr2 122190990 122191285 -131065298 - AluSg SINE Alu -15 295 1 10663 203 47 28 chr2 122191285 122192537 -131064046 - L1MC1 LINE L1 -3023 3590 2363 622 214 71 8 chr2 122192548 122192674 -131063909 - FLAM_A SINE Alu -8 134 1 3343 150 66 12 chr2 122192674 122193923 -131062660 - L1MC1 LINE L1 -4101 2325 912 * 20735 34 5 0 chr2 122193922 122198134 -131058449 + L1PA3 LINE L1 1928 6154 -1 4184 186 30 24 chr2 122198131 122198978 -131057605 - L1MC1 LINE L1 -5500 926 75 * 424 383 0 5 chr2 122199520 122199713 -131056870 - MER117 DNA MER1_type -4 193 2 408 258 0 21 chr2 122200045 122200142 -131056441 + MER5B DNA MER1_type 55 149 -29 993 196 54 80 chr2 122200513 122200849 -131055734 - MER46C DNA MER2_type 0 338 12 275 186 7 103 chr2 122201041 122201164 -131055419 - L1MC4 LINE L1 -1315 6727 6594 14790 39 7 8 chr2 122201164 122202317 -131054266 - L1PA5 LINE L1 -15 6139 4987 189 0 0 0 chr2 122202317 122202338 -131054245 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2241 99 0 0 chr2 122202338 122202621 -131053962 - AluY SINE Alu -28 283 1 14790 39 7 8 chr2 122202621 122204017 -131052566 - L1PA5 LINE L1 -1165 4989 3590 275 186 7 103 chr2 122204017 122204038 -131052545 - L1MC4 LINE L1 -1447 6595 6597 297 314 134 16 chr2 122204595 122204789 -131051794 - MIR SINE MIR -14 248 32 3420 0 0 0 chr2 122205634 122206005 -131050578 - L1HS LINE L1 0 6155 5785 525 0 0 0 chr2 122206001 122206059 -131050524 + L1P1 LINE L1 5442 5499 -656 * 28 29 0 0 chr2 122206089 122206124 -131050459 + AT_rich Low_complexity Low_complexity 1 35 0 7647 34 9 17 chr2 122206124 122207411 -131049172 - L1PA3 LINE L1 0 6155 4874 11191 28 5 0 chr2 122207411 122208721 -131047862 + L1P LINE L1 3638 4953 -1193 756 163 0 31 chr2 122208721 122208850 -131047733 - FLAM_C SINE Alu -16 127 3 266 209 60 0 chr2 122209431 122209498 -131047085 - MER112 DNA MER1_type -109 151 81 279 195 146 12 chr2 122209504 122209586 -131046997 + L2 LINE L2 2607 2699 -615 2007 130 7 3 chr2 122209587 122209886 -131046697 - AluJb SINE Alu -7 305 6 2191 106 3 0 chr2 122209920 122210230 -131046353 + AluSp SINE Alu 1 311 0 832 240 153 31 chr2 122210276 122210668 -131045915 + L2 LINE L2 2871 3310 -3 554 279 110 45 chr2 122210669 122211128 -131045455 - MLT1L LTR MaLR -62 538 39 609 278 124 39 chr2 122211850 122212206 -131044377 - L1MC4a LINE L1 -1924 5884 5499 198 229 33 16 chr2 122215367 122215428 -131041155 + L2 LINE L2 2991 3052 -220 2367 75 20 0 chr2 122216917 122217211 -131039372 + AluY SINE Alu 1 300 -11 43308 50 7 1 chr2 122219145 122219671 -131036912 + L1PA4 LINE L1 1 522 -5633 252 0 0 0 chr2 122219671 122219699 -131036884 + (CCTG)n Simple_repeat Simple_repeat 2 29 0 43308 50 7 1 chr2 122219699 122225288 -131031295 + L1PA4 LINE L1 522 6154 -1 372 236 55 36 chr2 122226550 122226660 -131029923 - MIR SINE MIR -123 139 28 1240 168 14 0 chr2 122227426 122227640 -131028943 + MER20 DNA MER1_type 3 219 0 284 268 181 60 chr2 122227879 122228144 -131028439 - L2 LINE L2 -2 3311 3015 347 297 70 14 chr2 122229046 122229184 -131027399 + MIR SINE MIR 6 148 -63 228 207 0 35 chr2 122229730 122229788 -131026795 + MARNA DNA Mariner 43 98 -488 266 265 49 29 chr2 122229861 122229963 -131026620 - L2 LINE L2 0 3313 3210 197 235 0 0 chr2 122231245 122231279 -131025304 + L2 LINE L2 3258 3291 -22 23 33 0 0 chr2 122232350 122232380 -131024203 + AT_rich Low_complexity Low_complexity 1 30 0 239 293 73 0 chr2 122233812 122233894 -131022689 - L2 LINE L2 0 3272 3185 193 171 0 0 chr2 122234196 122234231 -131022352 - MIR SINE MIR -111 151 117 1111 15 8 0 chr2 122234432 122234562 -131022021 + L1PA2 LINE L1 6025 6155 0 227 195 247 0 chr2 122235261 122235338 -131021245 + MER5B DNA MER1_type 21 116 -62 411 306 136 32 chr2 122238235 122238735 -131017848 + L2 LINE L2 1603 2154 -1160 195 261 46 31 chr2 122238989 122239054 -131017529 + L2 LINE L2 2442 2507 -807 227 182 0 0 chr2 122240479 122240512 -131016071 + Charlie5 DNA MER1_type 1 33 -2579 * 340 198 58 35 chr2 122240485 122240571 -131016012 - MER3 DNA MER1_type -121 88 1 676 219 207 0 chr2 122240995 122241164 -131015419 + MER58A DNA MER1_type 15 218 -6 2606 50 0 3 chr2 122243709 122244009 -131012574 - AluY SINE Alu -12 299 1 261 216 124 31 chr2 122245550 122245647 -131010936 + L1MC/D LINE L1 5780 5885 -1923 22 35 0 0 chr2 122245714 122245743 -131010840 + AT_rich Low_complexity Low_complexity 1 29 0 215 233 349 0 chr2 122246844 122246930 -131009653 + MIR SINE MIR 28 143 -119 188 273 273 0 chr2 122248471 122248548 -131008035 - MIR SINE MIR -59 203 106 459 361 43 10 chr2 122248610 122248818 -131007765 - MIR SINE MIR -11 251 37 885 191 0 0 chr2 122249556 122249708 -131006875 + MLT1A1 LTR MaLR 1 152 -213 1012 206 9 23 chr2 122249709 122249927 -131006656 + AluJo SINE Alu 86 300 -12 806 204 177 5 chr2 122249927 122250113 -131006470 + MLT1A1 LTR MaLR 148 365 0 2649 92 24 16 chr2 122250722 122251092 -131005491 + THE1C LTR MaLR 1 373 -2 406 159 57 23 chr2 122251092 122251180 -131005403 + MIR SINE MIR 124 214 -48 289 279 0 0 chr2 122251499 122251578 -131005005 + L1MC/D LINE L1 5754 5832 -1976 652 265 19 12 chr2 122251582 122251744 -131004839 + MIR SINE MIR 52 214 -48 2275 97 3 3 chr2 122252907 122253206 -131003377 - AluSp SINE Alu -14 299 1 402 314 13 26 chr2 122253476 122253629 -131002954 + L2 LINE L2 2604 2754 -560 335 354 101 35 chr2 122253714 122254059 -131002524 + L2 LINE L2 2902 3269 -3 1216 201 27 5 chr2 122254093 122254312 -131002271 - MER58A DNA MER1_type 0 224 1 196 156 0 0 chr2 122254695 122254727 -131001856 - L2 LINE L2 -306 2966 2935 636 188 91 13 chr2 122256737 122256891 -130999692 + Charlie1 DNA MER1_type 40 205 -2556 248 232 41 67 chr2 122256874 122257068 -130999515 + Charlie1 DNA MER1_type 2572 2760 -1 * 198 309 125 79 chr2 122258154 122258306 -130998277 - L3 LINE CR1 -2 1575 1417 2102 135 3 0 chr2 122258377 122258673 -130997910 + AluSx SINE Alu 1 297 -15 21 36 0 0 chr2 122258694 122258722 -130997861 + AT_rich Low_complexity Low_complexity 1 28 0 701 334 31 16 chr2 122258914 122259234 -130997349 + L1MEd LINE L1 446 770 -5349 230 324 182 14 chr2 122259306 122259561 -130997022 - L3 LINE CR1 -262 1315 966 257 233 136 29 chr2 122260180 122260283 -130996300 - L2 LINE L2 -9 3263 3150 220 256 275 19 chr2 122260414 122260574 -130996009 - L2 LINE L2 -1 3312 3112 1879 152 7 14 chr2 122260621 122260918 -130995665 - AluJo SINE Alu -17 295 1 27 49 0 0 chr2 122261918 122261959 -130994624 + AT_rich Low_complexity Low_complexity 1 41 0 240 281 0 37 chr2 122262455 122262537 -130994046 + MLT1K LTR MaLR 494 572 -16 2210 106 3 3 chr2 122263016 122263308 -130993275 - AluSx SINE Alu -20 292 1 308 284 143 10 chr2 122263641 122263778 -130992805 + MIR SINE MIR 18 171 -65 2022 213 125 32 chr2 122265005 122265541 -130991042 + MLT1E LTR MaLR 3 588 -5 2783 171 119 28 chr2 122265552 122266115 -130990468 + MER90 LTR ERV1 1 614 0 1741 183 0 3 chr2 122267096 122267385 -130989198 + AluJb SINE Alu 1 288 -24 689 284 67 0 chr2 122267538 122267746 -130988837 - MIR SINE MIR -33 229 8 1406 193 26 9 chr2 122267991 122268224 -130988359 + MER8 DNA MER2_type 1 237 -2 749 210 97 25 chr2 122271624 122271862 -130984721 - MER112 DNA MER1_type -1 255 1 255 380 37 6 chr2 122271979 122272142 -130984441 + MIR3 SINE MIR 38 205 -3 825 263 92 4 chr2 122272558 122272786 -130983797 - MIR SINE MIR -2 260 13 1983 42 0 13 chr2 122272950 122273186 -130983397 - AluY SINE Alu -11 300 68 604 317 50 5 chr2 122273248 122273469 -130983114 + MIR SINE MIR 13 243 -19 2064 126 0 31 chr2 122274731 122275049 -130981534 + AluSx SINE Alu 1 308 -4 269 335 40 29 chr2 122275858 122276031 -130980552 + LTR67 LTR ERVL 114 288 -269 2406 186 24 4 chr2 122276688 122276998 -130979585 - L1MB7 LINE L1 -2 6182 5873 356 172 163 69 chr2 122276998 122277201 -130979382 - L1PA3 LINE L1 -280 5875 5654 449 182 0 34 chr2 122277221 122277309 -130979274 + L2 LINE L2 3228 3312 -1 264 200 77 0 chr2 122277684 122277749 -130978834 - MER3 DNA MER1_type 0 2301 2232 661 151 92 0 chr2 122277756 122277875 -130978708 - MER3 DNA MER1_type -87 122 40 310 272 40 9 chr2 122278948 122279059 -130977524 + MER34 LTR ERV1 1 117 -466 * 2088 152 152 2 chr2 122279048 122279468 -130977115 + LTR48B LTR ERV1 151 633 -11 432 0 0 0 chr2 122279646 122279694 -130976889 + (TA)n Simple_repeat Simple_repeat 1 48 0 493 231 96 0 chr2 122280848 122280952 -130975631 + MER45 DNA AcHobo 1 114 -64 197 33 33 0 chr2 122281147 122281177 -130975406 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 21 36 0 0 chr2 122281527 122281555 -130975028 + AT_rich Low_complexity Low_complexity 1 28 0 755 58 0 29 chr2 122282171 122282274 -130974309 - AluY SINE Alu -3 308 209 23 0 0 0 chr2 122283046 122283069 -130973514 + AT_rich Low_complexity Low_complexity 1 23 0 195 303 127 79 chr2 122283185 122283350 -130973233 - MIR SINE MIR -55 207 35 605 265 18 18 chr2 122283536 122283702 -130972881 + MIR3 SINE MIR 37 202 -6 520 276 115 5 chr2 122283850 122284042 -130972541 - MIR SINE MIR -2 260 48 226 83 0 42 chr2 122284112 122284160 -130972423 + (TA)n Simple_repeat Simple_repeat 2 47 0 1750 222 67 50 chr2 122285000 122285523 -130971060 + LTR55 LTR ERV 2 533 -15 352 244 13 0 chr2 122285537 122285615 -130970968 + L2 LINE L2 3235 3313 0 * 366 267 204 23 chr2 122285614 122285790 -130970793 + MIR SINE MIR 34 241 -21 469 250 158 60 chr2 122286499 122287011 -130969572 + L1ME4a LINE L1 5560 6121 0 545 271 47 26 chr2 122287512 122287704 -130968879 + MIR SINE MIR 54 249 -13 1969 153 0 3 chr2 122288259 122288554 -130968029 - AluJb SINE Alu -13 299 6 637 256 84 30 chr2 122288642 122288845 -130967738 + MIR SINE MIR 48 261 -1 2372 61 7 0 chr2 122289130 122289426 -130967157 + AluY SINE Alu 1 298 -13 2196 123 0 0 chr2 122289745 122290047 -130966536 - AluSg SINE Alu -8 302 1 241 316 137 8 chr2 122290519 122290636 -130965947 + MARNA DNA Mariner 74 205 -381 447 265 141 5 chr2 122291760 122291950 -130964633 + MIR SINE MIR 45 260 -2 199 53 26 26 chr2 122291952 122291990 -130964593 + (TTA)n Simple_repeat Simple_repeat 1 38 0 261 263 66 51 chr2 122292609 122292746 -130963837 + MIR SINE MIR 100 238 -24 268 329 0 12 chr2 122293017 122293099 -130963484 - MIR SINE MIR -135 127 47 618 208 203 19 chr2 122295033 122295240 -130961343 - MIR SINE MIR -10 252 8 268 354 79 8 chr2 122295308 122295435 -130961148 + MIR3 SINE MIR 4 139 -69 1265 122 39 10 chr2 122295608 122295813 -130960770 + MER2 DNA MER2_type 1 211 -134 501 308 68 69 chr2 122296070 122296604 -130959979 - L2 LINE L2 -23 3290 2748 1541 206 10 10 chr2 122298771 122299072 -130957511 + AluJo SINE Alu 1 301 -11 313 287 188 11 chr2 122300107 122300288 -130956295 + MIR SINE MIR 47 259 -3 1022 216 65 46 chr2 122300839 122301163 -130955420 - MER46C DNA MER2_type 0 338 9 1680 161 45 7 chr2 122301497 122301783 -130954800 + AluJb SINE Alu 1 297 -15 312 267 40 0 chr2 122302208 122302309 -130954274 - MIR SINE MIR -61 147 43 352 236 293 7 chr2 122302557 122302697 -130953886 + MIR SINE MIR 77 256 -6 651 208 31 8 chr2 122303021 122303151 -130953432 + MER3 DNA MER1_type 15 147 -62 2187 108 10 0 chr2 122303405 122303712 -130952871 + AluSg SINE Alu 1 310 0 305 300 35 21 chr2 122303712 122303885 -130952698 + MER5A DNA MER1_type 1 174 -4 2058 126 3 0 chr2 122305105 122305391 -130951192 + AluSx SINE Alu 1 287 -25 1906 155 0 13 chr2 122305401 122305710 -130950873 + AluSx SINE Alu 1 305 -7 1989 99 28 68 chr2 122305923 122306118 -130950465 - AluY SINE Alu 0 311 133 183 42 0 0 chr2 122306118 122306142 -130950441 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1989 99 28 68 chr2 122306142 122306270 -130950313 - AluY SINE Alu -178 133 1 22 0 0 0 chr2 122306286 122306308 -130950275 + AT_rich Low_complexity Low_complexity 1 22 0 1026 155 12 0 chr2 122308145 122308306 -130948277 + AluSg/x SINE Alu 135 297 -13 21 0 0 0 chr2 122308480 122308501 -130948082 + AT_rich Low_complexity Low_complexity 1 21 0 243 0 0 0 chr2 122310122 122310149 -130946434 + (CCG)n Simple_repeat Simple_repeat 2 28 0 1672 144 48 4 chr2 122311028 122311299 -130945284 + AluJb SINE Alu 4 286 -26 321 289 0 0 chr2 122311300 122311383 -130945200 + L1MC4 LINE L1 6621 6703 -1339 2346 91 3 0 chr2 122311988 122312284 -130944299 + AluSp SINE Alu 3 299 -14 1893 159 36 0 chr2 122312400 122312702 -130943881 + 7SLRNA srpRNA srpRNA 4 316 -4 2813 137 31 0 chr2 122312990 122313405 -130943178 + MSTA LTR MaLR 1 428 0 2647 45 0 0 chr2 122313456 122313765 -130942818 - AluY SINE Alu -2 309 1 280 344 46 23 chr2 122313809 122313940 -130942643 - MIR SINE MIR -59 149 16 288 53 0 0 chr2 122313940 122313978 -130942605 + (TCCA)n Simple_repeat Simple_repeat 1 38 0 438 216 265 0 chr2 122314005 122314107 -130942476 - MER5B DNA MER1_type 0 178 50 279 188 130 0 chr2 122314670 122314739 -130941844 - MER5B DNA MER1_type -94 84 7 236 263 0 0 chr2 122314745 122314802 -130941781 - L2 LINE L2 -35 3278 3222 859 128 0 0 chr2 122314893 122315010 -130941573 + FLAM_C SINE Alu 5 121 -22 256 108 0 46 chr2 122315012 122315077 -130941506 + (CAA)n Simple_repeat Simple_repeat 2 63 0 359 296 0 0 chr2 122315531 122315629 -130940954 + L1ME LINE L1 5693 5790 -331 186 219 0 0 chr2 122316035 122316076 -130940507 - L2 LINE L2 -9 3304 3264 1647 184 82 15 chr2 122316156 122316498 -130940085 - MLT1A1 LTR MaLR 0 365 1 326 276 90 83 chr2 122316541 122316853 -130939730 + MLT1I LTR MaLR 71 384 -25 1126 196 87 55 chr2 122317835 122318146 -130938437 - MER21B LTR ERV1 -1 862 542 2598 236 80 65 chr2 122318147 122318575 -130938008 - LTR49-int LTR ERV1 -975 3896 3476 2481 51 0 35 chr2 122318575 122318890 -130937693 - AluY SINE Alu -7 304 1 2598 236 80 65 chr2 122318890 122319246 -130937337 - LTR49-int LTR ERV1 -1395 3476 3089 2591 55 0 0 chr2 122319246 122319556 -130937027 + AluY SINE Alu 2 311 0 2598 236 80 65 chr2 122319556 122319846 -130936737 - LTR49-int LTR ERV1 -1782 3089 2805 1135 187 24 66 chr2 122319847 122320136 -130936447 - LTR49-int LTR ERV1 -2015 4316 4040 1605 162 0 64 chr2 122320144 122320256 -130936327 + AluJb SINE Alu 1 119 -193 2338 114 76 18 chr2 122320256 122320599 -130935984 + THE1B LTR MaLR 1 363 -1 1605 162 0 64 chr2 122320599 122320800 -130935783 + AluJb SINE Alu 119 294 -18 377 183 63 18 chr2 122320815 122320916 -130935667 - LTR49-int LTR ERV1 -2339 2597 2509 * 416 216 35 0 chr2 122320907 122321023 -130935560 - LTR49-int LTR ERV1 -6267 1853 1734 259 218 41 109 chr2 122321023 122321170 -130935413 - LTR49-int LTR ERV1 -3474 4063 3927 635 161 161 0 chr2 122321238 122321350 -130935233 - FLAM_A SINE Alu -3 139 10 1179 209 118 61 chr2 122321393 122321708 -130934875 - LTR49-int LTR ERV1 -3021 2818 2523 2313 67 0 0 chr2 122321708 122322015 -130934568 - AluY SINE Alu 0 307 1 1179 209 118 61 chr2 122322015 122322325 -130934258 - LTR49-int LTR ERV1 -3316 2523 1415 2087 115 5 12 chr2 122322360 122322899 -130933684 - MER4A LTR ERV1 0 664 12 1673 181 7 0 chr2 122322906 122323183 -130933400 + AluJo SINE Alu 17 295 -17 422 214 12 144 chr2 122323187 122323341 -130933242 - LTR49-int LTR ERV1 -3682 1189 1097 499 237 19 25 chr2 122323341 122323559 -130933024 - MER34C LTR ERV1 -175 410 161 653 195 20 48 chr2 122323563 122323861 -130932722 - LTR49-int LTR ERV1 -4134 989 666 1756 238 38 78 chr2 122323944 122324582 -130932001 - LTR9 LTR ERV1 0 612 1 3883 145 75 6 chr2 122324847 122325515 -130931068 + MER50 LTR ERV1 1 714 -20 891 160 0 0 chr2 122325522 122325653 -130930930 + FLAM_A SINE Alu 1 131 -2 625 218 19 68 chr2 122326072 122326322 -130930261 - LTR49-int LTR ERV1 -4187 2144 1327 2681 149 34 63 chr2 122326336 122326861 -130929722 - LTR54 LTR ERV1 0 510 1 2124 117 0 3 chr2 122327053 122327351 -130929232 - AluSx SINE Alu -12 300 4 396 281 35 18 chr2 122327421 122327613 -130928970 + L1M4 LINE L1 5665 5867 -311 30 27 0 0 chr2 122327945 122327982 -130928601 + AT_rich Low_complexity Low_complexity 1 37 0 226 308 33 44 chr2 122328283 122328374 -130928209 + L2 LINE L2 3133 3222 -50 474 168 17 8 chr2 122328420 122328539 -130928044 + (TGGA)n Simple_repeat Simple_repeat 3 122 0 763 196 152 19 chr2 122328703 122328861 -130927722 - AluJb SINE Alu 0 312 134 1222 77 0 16 chr2 122329010 122329192 -130927391 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 24 32 0 0 chr2 122330708 122330739 -130925844 + AT_rich Low_complexity Low_complexity 1 31 0 2806 105 16 8 chr2 122330744 122331116 -130925467 - THE1C LTR MaLR 0 375 1 358 184 28 37 chr2 122331118 122331227 -130925356 + HAL1 LINE L1 1039 1146 -1361 917 260 55 12 chr2 122331255 122331582 -130925001 + HAL1 LINE L1 1297 1637 -870 1674 198 7 3 chr2 122331583 122331886 -130924697 - AluJo SINE Alu -8 304 1 3794 126 11 204 chr2 122331903 122332319 -130924264 - L1P LINE L1 -2814 3332 3278 195 42 0 0 chr2 122332319 122332343 -130924240 + (TTTAA)n Simple_repeat Simple_repeat 1 24 0 3794 126 11 204 chr2 122332343 122333077 -130923506 - L1P LINE L1 -2868 3278 2404 427 254 109 72 chr2 122333088 122333364 -130923219 + MLT1J LTR MaLR 13 298 -213 229 344 58 13 chr2 122333613 122333767 -130922816 + L2 LINE L2 583 743 -2571 181 280 53 40 chr2 122334356 122334431 -130922152 + L2 LINE L2 3197 3272 0 666 208 19 7 chr2 122335539 122335693 -130920890 - MER103 DNA DNA -1 165 10 2160 131 120 21 chr2 122335922 122336305 -130920278 - MSTA LTR MaLR -6 422 2 247 119 169 51 chr2 122336795 122336854 -130919729 + MLT1C LTR MaLR 372 437 -30 422 305 89 29 chr2 122336997 122337243 -130919340 - MLT2F LTR ERVL -402 261 1 490 286 73 105 chr2 122337253 122337937 -130918646 - HAL1 LINE L1 -1837 670 9 252 193 0 0 chr2 122337950 122337960 -130918623 + (TA)n Simple_repeat Simple_repeat 1 10 -47 2590 111 6 0 chr2 122337960 122338320 -130918263 - L1PB1 LINE L1 -8 6143 5782 252 193 0 0 chr2 122338320 122338366 -130918217 + (TA)n Simple_repeat Simple_repeat 9 57 0 4182 171 8 1 chr2 122338366 122339682 -130916901 - L1PB1 LINE L1 -360 5791 4467 911 181 208 5 chr2 122340114 122340335 -130916248 + MER45B DNA AcHobo 393 658 -382 506 275 138 56 chr2 122340330 122340599 -130915984 - MLT1K LTR MaLR -26 562 272 * 197 292 90 22 chr2 122340860 122340949 -130915634 + MIR3 SINE MIR 111 205 -3 390 335 195 14 chr2 122341006 122341076 -130915507 + MIR SINE MIR 2 58 -204 4505 191 95 28 chr2 122341076 122342049 -130914534 + MER45B DNA AcHobo 1 1038 -2 390 335 195 14 chr2 122342049 122342199 -130914384 + MIR SINE MIR 58 262 0 1088 127 4 127 chr2 122342250 122342502 -130914081 - AluJb SINE Alu -8 304 84 361 301 183 14 chr2 122344739 122344952 -130911631 + MIR SINE MIR 14 262 0 752 279 41 20 chr2 122345187 122345431 -130911152 - MIR SINE MIR 0 262 14 246 219 177 31 chr2 122345843 122345939 -130910644 - MIR3 SINE MIR -94 114 5 309 279 29 66 chr2 122352428 122352564 -130904019 - MIR SINE MIR -119 143 13 344 331 58 0 chr2 122354571 122354692 -130901891 - L2 LINE L2 0 3313 3186 21 57 0 0 chr2 122354949 122354984 -130901599 + AT_rich Low_complexity Low_complexity 1 35 0 540 68 0 0 chr2 122356293 122356366 -130900217 + (TG)n Simple_repeat Simple_repeat 1 73 0 392 283 72 12 chr2 122356587 122356753 -130899830 - MIR SINE MIR 0 262 87 1074 251 117 0 chr2 122356923 122357274 -130899309 - MLT1H1 LTR MaLR -51 504 113 313 300 58 45 chr2 122357308 122357531 -130899052 + L2 LINE L2 1815 2040 -1274 1001 155 55 6 chr2 122357546 122357727 -130898856 + MER20 DNA MER1_type 30 219 0 238 151 0 57 chr2 122358062 122358115 -130898468 + L2 LINE L2 3264 3313 0 320 313 62 14 chr2 122358902 122359046 -130897537 + L2 LINE L2 3122 3272 0 1252 162 0 21 chr2 122359120 122359354 -130897229 - L1PA15 LINE L1 0 6165 5937 29 28 0 0 chr2 122359476 122359512 -130897071 + AT_rich Low_complexity Low_complexity 1 36 0 552 242 44 124 chr2 122359525 122359798 -130896785 - MIR SINE MIR -7 255 5 417 231 85 23 chr2 122359893 122360023 -130896560 - MIR SINE MIR -17 245 108 304 250 0 0 chr2 122360180 122360240 -130896343 - MIR3 SINE MIR -8 200 141 6444 140 67 9 chr2 122362958 122364122 -130892461 + Tigger3b DNA MER2_type 1 1231 0 869 248 32 5 chr2 122364508 122364726 -130891857 - MER58A DNA MER1_type 0 224 1 367 256 47 8 chr2 122365398 122365527 -130891056 - MER103 DNA DNA -31 135 2 321 348 65 75 chr2 122366352 122366631 -130889952 - L2 LINE L2 -4 3268 2993 429 205 68 12 chr2 122366870 122367031 -130889552 + Charlie7 DNA MER1_type 2440 2609 -3 1716 188 3 3 chr2 122367150 122367437 -130889146 - AluJo SINE Alu -25 287 1 454 235 83 26 chr2 122367448 122367699 -130888884 + HAL1b LINE L1 1191 1348 0 2148 130 0 0 chr2 122368246 122368538 -130888045 + AluSx SINE Alu 1 292 -20 186 343 82 0 chr2 122368873 122368946 -130887637 + L2 LINE L2 3143 3221 -51 2251 147 37 41 chr2 122369024 122369460 -130887123 + Tigger2a DNA MER2_type 1 434 0 412 279 86 7 chr2 122372133 122372273 -130884310 + MIR3 SINE MIR 58 208 0 1867 115 43 0 chr2 122373071 122373349 -130883234 - AluSx SINE Alu -10 302 13 283 256 12 12 chr2 122374283 122374365 -130882218 - MIR SINE MIR -73 135 54 2150 129 0 0 chr2 122375215 122375517 -130881066 + AluSc SINE Alu 1 302 -7 371 261 49 42 chr2 122375736 122375882 -130880701 - MIR3 SINE MIR -82 126 4 411 271 96 18 chr2 122376331 122376497 -130880086 + MLT1G LTR MaLR 11 189 -401 313 336 106 51 chr2 122376962 122377254 -130879329 + L3 LINE CR1 1 308 -1269 990 311 147 67 chr2 122377378 122378249 -130878334 + L3 LINE CR1 562 1502 -75 256 234 99 4 chr2 122378328 122378430 -130878153 - MIR SINE MIR -74 134 26 346 302 156 28 chr2 122380298 122380586 -130875997 + L2 LINE L2 2199 2523 -791 262 381 52 22 chr2 122380756 122380890 -130875693 + L2 LINE L2 3128 3265 -7 269 277 32 75 chr2 122380907 122381001 -130875582 + MIR SINE MIR 13 102 -160 400 279 0 0 chr2 122381025 122381104 -130875479 - MER5B DNA MER1_type -99 79 1 247 184 252 19 chr2 122381110 122381213 -130875370 + MIR SINE MIR 117 243 -19 232 344 76 6 chr2 122381439 122381596 -130874987 + L2 LINE L2 3121 3288 -25 341 303 53 15 chr2 122382073 122382205 -130874378 - MIR3 SINE MIR -28 180 44 2068 107 0 0 chr2 122383383 122383682 -130872901 + AluSg SINE Alu 11 309 0 317 275 94 58 chr2 122386791 122386962 -130869621 + MIR SINE MIR 8 184 -78 22 56 0 0 chr2 122387042 122387078 -130869505 + AT_rich Low_complexity Low_complexity 1 36 0 586 184 84 0 chr2 122387898 122388033 -130868550 + MER20B DNA MER1_type 52 202 -17 562 273 158 0 chr2 122388589 122388798 -130867785 + MIR SINE MIR 9 250 -12 234 0 0 0 chr2 122388875 122388901 -130867682 + (ATG)n Simple_repeat Simple_repeat 3 28 0 189 0 0 0 chr2 122388962 122388983 -130867600 + (GGA)n Simple_repeat Simple_repeat 2 22 0 243 0 0 0 chr2 122389031 122389058 -130867525 + (GGA)n Simple_repeat Simple_repeat 2 28 0 234 0 0 0 chr2 122389094 122389120 -130867463 + (ATG)n Simple_repeat Simple_repeat 3 28 0 207 0 0 0 chr2 122389161 122389184 -130867399 + (ATG)n Simple_repeat Simple_repeat 3 25 0 360 0 0 0 chr2 122389225 122389265 -130867318 + (ATG)n Simple_repeat Simple_repeat 1 40 0 243 0 0 0 chr2 122389316 122389343 -130867240 + (GGA)n Simple_repeat Simple_repeat 2 28 0 261 0 0 0 chr2 122389379 122389408 -130867175 + (ATG)n Simple_repeat Simple_repeat 3 31 0 207 0 0 0 chr2 122389449 122389472 -130867111 + (ATG)n Simple_repeat Simple_repeat 3 25 0 360 0 0 0 chr2 122389513 122389553 -130867030 + (ATG)n Simple_repeat Simple_repeat 1 40 0 216 0 0 0 chr2 122389607 122389631 -130866952 + (GGA)n Simple_repeat Simple_repeat 2 25 0 243 0 0 0 chr2 122389679 122389706 -130866877 + (GGA)n Simple_repeat Simple_repeat 2 28 0 216 0 0 0 chr2 122389879 122389903 -130866680 + (GGA)n Simple_repeat Simple_repeat 2 25 0 297 0 0 0 chr2 122389957 122389990 -130866593 + (GGA)n Simple_repeat Simple_repeat 2 34 0 360 0 0 0 chr2 122390026 122390066 -130866517 + (ATG)n Simple_repeat Simple_repeat 1 40 0 216 0 0 0 chr2 122390120 122390144 -130866439 + (GGA)n Simple_repeat Simple_repeat 2 25 0 315 0 0 0 chr2 122390249 122390284 -130866299 + (ATG)n Simple_repeat Simple_repeat 3 37 0 198 0 0 0 chr2 122390383 122390405 -130866178 + (ATG)n Simple_repeat Simple_repeat 1 22 0 998 225 48 4 chr2 122391344 122391571 -130865012 + MIR SINE MIR 8 244 -18 905 242 33 18 chr2 122392913 122393186 -130863397 - L1ME1 LINE L1 -5 6161 5885 192 343 75 15 chr2 122394911 122394978 -130861605 + MIR3 SINE MIR 9 79 -129 212 236 0 18 chr2 122395147 122395202 -130861381 + (TG)n Simple_repeat Simple_repeat 2 55 0 2312 95 0 3 chr2 122396389 122396693 -130859890 - AluSg SINE Alu -7 303 1 183 42 0 0 chr2 122399085 122399109 -130857474 + (T)n Simple_repeat Simple_repeat 1 24 0 362 321 24 24 chr2 122400565 122400730 -130855853 - MIR3 SINE MIR -6 202 38 2425 84 0 3 chr2 122401060 122401356 -130855227 - AluY SINE Alu -16 295 1 25 0 0 0 chr2 122404614 122404639 -130851944 + AT_rich Low_complexity Low_complexity 1 25 0 2080 145 113 30 chr2 122406161 122406561 -130850022 - Tigger2a DNA MER2_type -1 433 1 615 287 61 32 chr2 122407058 122407445 -130849138 - L1M4c LINE L1 -854 1889 1406 918 179 0 0 chr2 122407446 122407608 -130848975 - MER5B DNA MER1_type -16 162 1 541 284 156 15 chr2 122407638 122408043 -130848540 - L2 LINE L2 -703 2611 2150 2206 85 0 7 chr2 122408064 122408371 -130848212 + AluSc SINE Alu 15 309 0 2302 98 0 0 chr2 122409404 122409699 -130846884 - AluSx SINE Alu -2 310 16 444 296 102 65 chr2 122409724 122410096 -130846487 - HAL1 LINE L1 -1079 1428 1043 406 258 102 16 chr2 122412235 122412440 -130844143 - MLT1J2 LTR MaLR -191 218 1 1633 128 31 78 chr2 122413209 122413528 -130843055 - AluJo SINE Alu -8 304 1 2396 89 3 0 chr2 122414130 122414433 -130842150 + AluSp SINE Alu 1 304 -9 248 294 52 15 chr2 122414537 122414673 -130841910 + MIR SINE MIR 74 214 -48 210 179 0 0 chr2 122415675 122415731 -130840852 + (CA)n Simple_repeat Simple_repeat 1 56 0 315 326 23 39 chr2 122416804 122416933 -130839650 - MIR3 SINE MIR -15 193 67 310 251 34 89 chr2 122417140 122417319 -130839264 - MIR SINE MIR -48 214 46 522 293 160 13 chr2 122418193 122418493 -130838090 - MLT1K LTR MaLR -51 537 194 229 301 14 0 chr2 122418639 122418712 -130837871 + GA-rich Low_complexity Low_complexity 6 79 0 182 364 0 0 chr2 122419301 122419367 -130837216 - L3b LINE CR1 -134 1449 1384 456 307 71 9 chr2 122420729 122420941 -130835642 + MIR SINE MIR 36 260 -2 297 271 59 0 chr2 122422225 122422310 -130834273 + L2 LINE L2 3183 3272 0 239 313 133 30 chr2 122422654 122422820 -130833763 + MIR SINE MIR 68 250 -12 204 163 0 23 chr2 122423034 122423077 -130833506 + A-rich Low_complexity Low_complexity 2 43 0 1253 177 0 9 chr2 122423359 122423574 -130833009 - AluJo SINE Alu -13 299 87 189 292 140 64 chr2 122424113 122424284 -130832299 + L2 LINE L2 2871 3054 -218 808 271 16 12 chr2 122424416 122424674 -130831909 + MIR SINE MIR 4 262 0 308 216 59 39 chr2 122424826 122424928 -130831655 - MIR SINE MIR -50 212 109 588 115 29 144 chr2 122429033 122429102 -130827481 + MLT1B LTR MaLR 268 343 -47 462 18 0 0 chr2 122429102 122429157 -130827426 + (GA)n Simple_repeat Simple_repeat 2 56 0 2228 93 0 4 chr2 122429157 122429436 -130827147 - AluSx SINE Alu -34 278 1 588 115 29 144 chr2 122429436 122429504 -130827079 + MLT1B LTR MaLR 341 390 0 1739 208 14 14 chr2 122429505 122429865 -130826718 + L1ME3A LINE L1 4519 4878 -1268 2029 210 63 9 chr2 122429865 122430326 -130826257 + L1ME3A LINE L1 5674 6159 -11 1072 144 0 0 chr2 122430526 122430686 -130825897 + AluSg/x SINE Alu 138 297 -13 285 51 103 0 chr2 122430688 122430727 -130825856 - MSTC LTR MaLR -385 43 1 2038 112 39 0 chr2 122430867 122431153 -130825430 + AluSx SINE Alu 1 297 -15 2096 119 3 31 chr2 122431155 122431475 -130825108 + AluSx SINE Alu 1 311 -1 1240 106 0 0 chr2 122432727 122432888 -130823695 - AluSp SINE Alu -19 294 134 340 264 182 54 chr2 122433052 122433530 -130823053 - LTR67 LTR ERVL -7 550 12 1355 151 95 0 chr2 122434115 122434367 -130822216 - L1MCa LINE L1 -6105 321 46 652 160 0 42 chr2 122435690 122435809 -130820774 + L1MA4 LINE L1 3924 4037 -2109 3691 146 27 5 chr2 122435809 122436458 -130820125 + L1MA4 LINE L1 5629 6300 0 508 261 142 0 chr2 122436796 122437007 -130819576 - L1ME LINE L1 -343 5778 5538 521 267 13 7 chr2 122438076 122438226 -130818357 - MIR SINE MIR -4 258 108 387 294 17 0 chr2 122439285 122439404 -130817179 + MIR3 SINE MIR 61 181 -27 378 261 0 0 chr2 122442093 122442185 -130814398 - MER5B DNA MER1_type -60 118 27 2278 111 3 0 chr2 122442524 122442831 -130813752 - AluSx SINE Alu -4 308 1 1322 239 100 0 chr2 122442950 122443281 -130813302 + MLT1A1 LTR MaLR 1 364 -1 254 83 0 0 chr2 122443481 122443529 -130813054 - LTR66 LTR ERVL -169 441 394 333 185 0 0 chr2 122443533 122443598 -130812985 + (CATATA)n Simple_repeat Simple_repeat 2 66 0 241 300 0 0 chr2 122443603 122443693 -130812890 + L1MC4 LINE L1 6614 6703 -1339 207 162 0 0 chr2 122443693 122443730 -130812853 + (TATATG)n Simple_repeat Simple_repeat 3 39 0 234 185 148 49 chr2 122443746 122443827 -130812756 + L1MC4 LINE L1 6615 6703 -1339 227 155 0 103 chr2 122443799 122443857 -130812726 - L1MC4 LINE L1 -1339 6703 6652 * 249 239 22 43 chr2 122443865 122443957 -130812626 - L1MC4 LINE L1 -1339 6703 6614 * 262 287 23 0 chr2 122443887 122443974 -130812609 + L1MC4 LINE L1 6614 6702 -1340 257 322 0 0 chr2 122444011 122444101 -130812482 + L1MC4 LINE L1 6614 6703 -1339 267 258 0 43 chr2 122444105 122444198 -130812385 - L1MC4 LINE L1 -1339 6703 6615 228 184 41 0 chr2 122444201 122444250 -130812333 - L1MC4 LINE L1 -1339 6703 6653 241 307 23 0 chr2 122444265 122444353 -130812230 - L1MC4 LINE L1 -1339 6703 6614 228 313 12 0 chr2 122444661 122444744 -130811839 + MIR3 SINE MIR 111 194 -14 215 278 205 26 chr2 122445113 122445264 -130811319 + L2 LINE L2 2245 2422 -892 1418 205 92 55 chr2 122445303 122445683 -130810900 + MSTD LTR MaLR 1 394 -2 290 302 78 9 chr2 122445754 122445870 -130810713 + MIR SINE MIR 30 153 -109 1951 60 0 13 chr2 122446014 122446248 -130810335 - AluY SINE Alu -80 231 1 356 250 70 0 chr2 122446253 122446353 -130810230 + MIR SINE MIR 143 249 -13 506 203 78 0 chr2 122447127 122447280 -130809303 - Charlie5 DNA MER1_type -27 2585 2421 1968 122 34 7 chr2 122447857 122448152 -130808431 - AluSx SINE Alu -3 309 7 624 139 62 62 chr2 122448505 122448649 -130807934 + L2 LINE L2 3170 3313 0 545 208 35 81 chr2 122449595 122449768 -130806815 + MER104 DNA Tc2 13 177 -3 907 111 0 15 chr2 122449955 122450090 -130806493 - MLT1A1 LTR MaLR -231 134 2 214 289 82 0 chr2 122450091 122450188 -130806395 - L2 LINE L2 -241 3031 2927 223 220 0 0 chr2 122450805 122450855 -130805728 - L2 LINE L2 -35 3237 3188 434 267 26 56 chr2 122451373 122451568 -130805015 - MIR SINE MIR -23 239 51 284 296 31 0 chr2 122451584 122451682 -130804901 + MIR SINE MIR 100 200 -62 206 232 0 18 chr2 122451759 122451815 -130804768 - MIR3 SINE MIR -45 163 109 2444 81 3 0 chr2 122452929 122453227 -130803356 - AluSp SINE Alu -2 311 13 1794 116 4 23 chr2 122453866 122454125 -130802458 + AluSx SINE Alu 36 289 -23 21 36 0 0 chr2 122454261 122454289 -130802294 + AT_rich Low_complexity Low_complexity 1 28 0 244 228 13 13 chr2 122454454 122454533 -130802050 + GA-rich Low_complexity Low_complexity 4 82 0 1070 298 161 19 chr2 122454661 122455301 -130801282 + L3 LINE CR1 117 847 -730 1587 137 67 16 chr2 122455457 122455712 -130800871 - AluJo SINE Alu -16 296 29 2238 82 36 0 chr2 122459334 122459615 -130796968 - AluSg SINE Alu -19 291 1 1426 183 4 57 chr2 122460577 122460856 -130795727 - AluSx SINE Alu -48 264 1 801 276 35 8 chr2 122460857 122461111 -130795472 - L1ME LINE L1 -341 5780 5520 861 272 32 0 chr2 122461404 122461621 -130794962 - MER58A DNA MER1_type 0 224 1 793 125 100 0 chr2 122461743 122461863 -130794720 - FLAM_C SINE Alu -1 132 1 388 306 78 57 chr2 122462173 122462418 -130794165 - MIR SINE MIR -1 261 12 766 225 128 69 chr2 122462431 122462797 -130793786 + MLT1J LTR MaLR 1 458 -53 284 244 70 0 chr2 122463224 122463310 -130793273 - MIR SINE MIR -62 200 109 187 367 92 0 chr2 122463593 122463691 -130792892 + L2 LINE L2 3139 3245 -27 892 259 177 42 chr2 122464600 122465052 -130791531 + MLT1H LTR MaLR 33 545 -4 2259 93 0 0 chr2 122465674 122465954 -130790629 - AluSx SINE Alu -14 298 19 291 286 180 6 chr2 122466436 122466614 -130789969 + MIR SINE MIR 46 254 -8 1113 176 9 14 chr2 122466820 122467030 -130789553 - MER2 DNA MER2_type -136 209 1 187 254 111 0 chr2 122467090 122467153 -130789430 - L2 LINE L2 0 3272 3203 2313 103 6 3 chr2 122467181 122467492 -130789091 + AluSx SINE Alu 1 312 0 1333 211 84 34 chr2 122467637 122468054 -130788529 + MER113 DNA MER1_type? 35 472 -49 1100 269 89 14 chr2 122468856 122469284 -130787299 - LTR16B LTR ERVL 0 464 5 1179 263 78 48 chr2 122469737 122469852 -130786731 + LTR33 LTR ERVL 3 113 -408 746 214 169 0 chr2 122469852 122470030 -130786553 + MER3 DNA MER1_type 2 209 0 1179 263 78 48 chr2 122470030 122470412 -130786171 + LTR33 LTR ERVL 113 515 -6 288 246 98 76 chr2 122470487 122470764 -130785819 - HAL1 LINE L1 -56 2451 2169 601 188 36 7 chr2 122471261 122471399 -130785184 - L1PA16 LINE L1 -1 6165 6024 43661 33 22 2 chr2 122471399 122477420 -130779163 - L1PA2 LINE L1 -8 6147 2 2174 153 23 26 chr2 122477423 122477488 -130779095 - L1PB4 LINE L1 -117 6039 5975 2035 103 18 0 chr2 122477488 122477761 -130778822 - AluSx SINE Alu -13 299 22 2174 153 23 26 chr2 122477761 122478086 -130778497 - L1PB4 LINE L1 -181 5975 5650 254 187 11 0 chr2 122478444 122478535 -130778048 + (TA)n Simple_repeat Simple_repeat 1 92 0 1909 179 0 3 chr2 122478537 122478833 -130777750 - AluJb SINE Alu -17 295 1 228 182 26 78 chr2 122478836 122478913 -130777670 - HAL1 LINE L1 -810 1697 1625 376 118 40 0 chr2 122478923 122478999 -130777584 + CT-rich Low_complexity Low_complexity 1 79 0 437 259 102 10 chr2 122478999 122479196 -130777387 - HAL1 LINE L1 -844 1663 1449 2350 48 0 7 chr2 122479451 122479741 -130776842 - L1PA8 LINE L1 0 6172 5885 254 269 222 19 chr2 122479768 122479876 -130776707 - MARNA DNA Mariner -438 148 19 251 282 52 6 chr2 122480002 122480136 -130776447 - MIR SINE MIR -57 151 16 2001 126 0 0 chr2 122481543 122481814 -130774769 + AluSg SINE Alu 28 298 -12 1932 200 66 16 chr2 122482137 122482577 -130774006 - MLT1C LTR MaLR 0 467 6 1311 7 0 0 chr2 122482962 122483105 -130773478 + AluYa5/8 SINE Alu 169 311 0 1819 250 97 10 chr2 122485329 122485930 -130770653 - L1ME3A LINE L1 -155 6015 5363 1087 202 0 14 chr2 122486317 122486535 -130770048 - AluJo SINE Alu -11 301 87 4405 211 51 34 chr2 122487318 122488435 -130768148 + L1MD1 LINE L1 3936 5032 -1210 1876 157 16 3 chr2 122488435 122488740 -130767843 + AluSg SINE Alu 1 309 -1 1503 177 34 4 chr2 122488745 122488827 -130767756 + AluSx SINE Alu 39 117 -195 459 0 0 0 chr2 122488827 122488878 -130767705 + (TAAAA)n Simple_repeat Simple_repeat 4 54 0 1503 177 34 4 chr2 122488878 122489061 -130767522 + AluSx SINE Alu 117 312 0 4405 211 51 34 chr2 122489061 122489863 -130766720 + L1MD1 LINE L1 5035 5884 -358 636 184 84 0 chr2 122490133 122490268 -130766315 + MER20B DNA MER1_type 52 202 -17 482 275 76 0 chr2 122490834 122491005 -130765578 + MIR SINE MIR 20 203 -59 234 0 0 0 chr2 122491110 122491136 -130765447 + (ATG)n Simple_repeat Simple_repeat 3 28 0 189 0 0 0 chr2 122491197 122491218 -130765365 + (GGA)n Simple_repeat Simple_repeat 2 22 0 243 0 0 0 chr2 122491266 122491293 -130765290 + (GGA)n Simple_repeat Simple_repeat 2 28 0 234 0 0 0 chr2 122491329 122491355 -130765228 + (ATG)n Simple_repeat Simple_repeat 3 28 0 207 0 0 0 chr2 122491396 122491419 -130765164 + (ATG)n Simple_repeat Simple_repeat 3 25 0 252 77 0 0 chr2 122491461 122491500 -130765083 + (ATG)n Simple_repeat Simple_repeat 1 39 0 216 0 0 0 chr2 122491554 122491578 -130765005 + (GGA)n Simple_repeat Simple_repeat 2 25 0 243 0 0 0 chr2 122491626 122491653 -130764930 + (GGA)n Simple_repeat Simple_repeat 2 28 0 216 0 0 0 chr2 122491826 122491850 -130764733 + (GGA)n Simple_repeat Simple_repeat 2 25 0 180 0 0 0 chr2 122491886 122491906 -130764677 + (ATG)n Simple_repeat Simple_repeat 3 22 0 * 282 56 0 0 chr2 122491904 122491940 -130764643 + (GGA)n Simple_repeat Simple_repeat 2 37 0 360 0 0 0 chr2 122491974 122492014 -130764569 + (ATG)n Simple_repeat Simple_repeat 1 40 0 216 0 0 0 chr2 122492068 122492092 -130764491 + (GGA)n Simple_repeat Simple_repeat 2 25 0 315 0 0 0 chr2 122492197 122492232 -130764351 + (ATG)n Simple_repeat Simple_repeat 3 37 0 198 0 0 0 chr2 122492331 122492353 -130764230 + (ATG)n Simple_repeat Simple_repeat 1 22 0 243 272 0 0 chr2 122494128 122494209 -130762374 + (TG)n Simple_repeat Simple_repeat 1 81 0 290 329 107 25 chr2 122495834 122496114 -130760469 - L3 LINE CR1 -213 1364 1062 1649 138 32 50 chr2 122496316 122496429 -130760154 - LTR49 LTR ERV1 -260 335 222 1733 168 0 55 chr2 122496429 122496757 -130759826 - AluJo SINE Alu 0 312 3 1649 138 32 50 chr2 122496757 122496984 -130759599 - LTR49 LTR ERV1 -373 222 1 4710 202 28 18 chr2 122496984 122497512 -130759071 + L1MB1 LINE L1 4108 4629 -1517 2326 99 55 0 chr2 122497512 122497855 -130758728 + L1PA14 LINE L1 5800 6161 0 4710 202 28 18 chr2 122497855 122498433 -130758150 + L1MB1 LINE L1 4629 5225 -921 2130 138 31 15 chr2 122498435 122498761 -130757822 + THE1B LTR MaLR 3 333 -31 668 71 0 0 chr2 122498761 122498846 -130757737 - AluY SINE Alu -10 301 217 2065 83 0 11 chr2 122498846 122499111 -130757472 - AluY SINE Alu -49 262 1 356 25 0 0 chr2 122499111 122499151 -130757432 + THE1B LTR MaLR 316 355 0 11980 94 2 1 chr2 122499151 122500729 -130755854 + THE1B-int LTR MaLR 1 1580 0 2206 137 30 35 chr2 122500729 122501095 -130755488 + THE1B LTR MaLR 1 364 0 3879 184 25 0 chr2 122501097 122501821 -130754762 + L1MB1 LINE L1 5222 5982 -186 361 169 42 0 chr2 122501921 122501992 -130754591 + MLT1D LTR MaLR 421 494 -11 255 363 69 0 chr2 122502179 122502281 -130754302 - L2 LINE L2 0 3272 3164 433 228 33 0 chr2 122502622 122502714 -130753869 - MER112 DNA MER1_type -4 256 162 6832 87 2 7 chr2 122502726 122503644 -130752939 + L1PA10 LINE L1 5254 6167 -1 238 230 81 23 chr2 122503650 122503737 -130752846 - MER112 DNA MER1_type -82 178 87 204 40 0 0 chr2 122503746 122503771 -130752812 + (TG)n Simple_repeat Simple_repeat 2 26 0 335 342 45 0 chr2 122504010 122504121 -130752462 + MER91A DNA MER1_type 1 116 -80 260 273 91 0 chr2 122504146 122504234 -130752349 + MER91A DNA MER1_type 90 185 -11 2167 121 0 10 chr2 122504331 122504638 -130751945 - AluSq SINE Alu -9 304 1 4466 120 55 163 chr2 122505893 122507227 -130749356 + L1MA4 LINE L1 5108 6296 -4 207 0 0 0 chr2 122507509 122507532 -130749051 + (T)n Simple_repeat Simple_repeat 1 23 0 787 191 20 0 chr2 122507633 122507785 -130748798 + L1MB1 LINE L1 6013 6167 -1 894 231 85 35 chr2 122507799 122508246 -130748337 + L1ME3A LINE L1 5152 5654 -508 850 211 37 0 chr2 122508277 122508438 -130748145 + AluSg/x SINE Alu 134 300 -10 1436 256 28 28 chr2 122508439 122508838 -130747745 + L1ME3A LINE L1 5694 6092 -78 297 280 120 10 chr2 122508843 122508943 -130747640 + MIR SINE MIR 42 152 -110 1853 138 16 44 chr2 122509145 122509464 -130747119 - AluSx SINE Alu 0 312 3 189 107 0 0 chr2 122510247 122510275 -130746308 + (T)n Simple_repeat Simple_repeat 1 28 0 236 225 150 0 chr2 122510495 122510575 -130746008 + MIR SINE MIR 20 111 -151 1120 174 23 28 chr2 122510635 122510853 -130745730 + MER20 DNA MER1_type 3 219 0 204 311 104 42 chr2 122510985 122511178 -130745405 + L2 LINE L2 1276 1480 -1834 540 231 32 75 chr2 122511306 122511492 -130745091 + MLT1L LTR MaLR 214 391 -224 928 317 103 47 chr2 122511702 122512594 -130743989 + L2 LINE L2 1560 2501 -813 275 301 58 68 chr2 122512912 122513118 -130743465 + L2 LINE L2 2966 3169 -103 311 232 42 42 chr2 122513155 122513250 -130743333 + L2 LINE L2 3111 3205 -67 242 269 179 39 chr2 122513458 122513614 -130742969 - MIR SINE MIR -71 191 14 2281 140 24 0 chr2 122515332 122515668 -130740915 - MER2 DNA MER2_type 0 344 1 607 281 133 28 chr2 122516278 122516708 -130739875 + L1ME1 LINE L1 5437 5911 -255 21 0 0 0 chr2 122517037 122517058 -130739525 + AT_rich Low_complexity Low_complexity 1 21 0 1470 171 4 42 chr2 122517259 122517523 -130739060 + AluJo SINE Alu 34 287 -25 254 179 18 0 chr2 122517523 122517579 -130739004 + (CATATA)n Simple_repeat Simple_repeat 3 59 0 2305 81 0 10 chr2 122517627 122517925 -130738658 + AluY SINE Alu 1 295 -16 313 234 9 28 chr2 122517938 122518045 -130738538 + L1M LINE L1 5302 5406 -756 908 136 0 0 chr2 122518084 122518202 -130738381 - FLAM_C SINE Alu -15 118 1 478 261 56 21 chr2 122518373 122518515 -130738068 - MIR SINE MIR 0 262 116 321 194 20 41 chr2 122518884 122518982 -130737601 + L1ME LINE L1 186 281 -5924 1339 292 49 60 chr2 122519715 122520966 -130735617 + L1ME LINE L1 709 1945 -4451 1098 254 131 11 chr2 122521062 122521582 -130735001 + L1M4 LINE L1 4577 5158 -988 * 8498 232 38 18 chr2 122521573 122524841 -130731742 + L1ME LINE L1 809 4180 -2035 2898 151 92 39 chr2 122524841 122525181 -130731402 - LTR49 LTR ERV1 0 595 212 1489 201 0 55 chr2 122525181 122525509 -130731074 - AluJo SINE Alu 0 312 3 2898 151 92 39 chr2 122525509 122525732 -130730851 - LTR49 LTR ERV1 -383 212 2 972 216 91 100 chr2 122525921 122526373 -130730210 - MLT1D LTR MaLR -9 496 5 359 305 26 19 chr2 122526392 122526546 -130730037 - MIR3 SINE MIR -20 188 34 293 264 22 22 chr2 122527278 122527369 -130729214 - L1MC4 LINE L1 -1338 6704 6614 326 235 110 22 chr2 122527944 122528080 -130728503 - Charlie8 DNA MER1_type -2143 274 127 413 284 174 13 chr2 122528504 122528659 -130727924 - MER5A DNA MER1_type 0 189 10 580 316 104 7 chr2 122528674 122528971 -130727612 + MER115 DNA AcHobo 60 385 -308 262 224 60 0 chr2 122528971 122529038 -130727545 + MER5A DNA MER1_type 117 187 -2 226 308 99 22 chr2 122529175 122529266 -130727317 + MIR3 SINE MIR 60 157 -51 443 189 21 0 chr2 122529515 122529610 -130726973 - MER5A DNA MER1_type -83 106 10 456 305 75 5 chr2 122529791 122529978 -130726605 - Charlie8 DNA MER1_type -2132 285 86 489 313 79 14 chr2 122530765 122530979 -130725604 + MIR SINE MIR 35 262 0 7304 222 78 19 chr2 122531287 122534842 -130721741 + L1MDa LINE L1 20 4003 -2537 2480 54 0 7 chr2 122535312 122535608 -130720975 + AluY SINE Alu 1 294 -17 343 221 15 0 chr2 122536107 122536175 -130720408 + L3 LINE CR1 1425 1493 -84 258 138 17 35 chr2 122536707 122536765 -130719818 + L1ME4a LINE L1 6050 6106 -15 354 342 123 5 chr2 122538810 122538997 -130717586 - MIR SINE MIR -13 249 41 392 219 0 0 chr2 122539642 122539724 -130716859 + MIR SINE MIR 48 129 -133 317 297 91 30 chr2 122540046 122540211 -130716372 - MER20B DNA MER1_type -607 176 2 499 328 56 16 chr2 122540821 122541071 -130715512 + MIR SINE MIR 3 262 0 2101 127 0 0 chr2 122541103 122541413 -130715170 + AluSq SINE Alu 1 310 0 379 332 173 9 chr2 122542809 122543029 -130713554 + L3 LINE CR1 1320 1575 -2 451 262 78 24 chr2 122543171 122543384 -130713199 - MIR SINE MIR -32 230 3 214 263 12 25 chr2 122543824 122543904 -130712679 + (TATG)n Simple_repeat Simple_repeat 4 82 0 528 277 27 20 chr2 122544205 122544353 -130712230 + MIR SINE MIR 28 176 -86 496 316 7 0 chr2 122545980 122546119 -130710464 - MARNA DNA Mariner -348 238 99 359 335 72 24 chr2 122546183 122546350 -130710233 + L2 LINE L2 3080 3254 -18 872 168 19 12 chr2 122546551 122546712 -130709871 + MIR SINE MIR 1 162 -100 2046 119 16 32 chr2 122546814 122547125 -130709458 - AluSx SINE Alu -6 306 1 476 242 61 76 chr2 122547218 122547319 -130709264 - MIR SINE MIR -8 254 156 2909 167 9 11 chr2 122547319 122547785 -130708798 + MLT1C LTR MaLR 3 467 0 476 242 61 76 chr2 122547785 122547881 -130708702 - MIR SINE MIR -106 156 60 1105 231 99 60 chr2 122548754 122549239 -130707344 + MLT1J LTR MaLR 1 504 -7 232 279 205 8 chr2 122549288 122549410 -130707173 - MIR SINE MIR -110 152 7 338 250 29 37 chr2 122550361 122550497 -130706086 - MER117 DNA MER1_type -31 166 32 1839 172 3 7 chr2 122550522 122550824 -130705759 + AluJb SINE Alu 1 301 -11 480 35 0 0 chr2 122550825 122550883 -130705700 + (GGAA)n Simple_repeat Simple_repeat 2 59 0 211 425 43 0 chr2 122550900 122550994 -130705589 + L2 LINE L2 3161 3258 -14 6088 162 39 12 chr2 122551201 122552415 -130704168 - L1MC1 LINE L1 0 6333 5079 2004 124 3 3 chr2 122552415 122552722 -130703861 + AluSx SINE Alu 1 307 -5 6088 162 39 12 chr2 122552722 122552880 -130703703 - L1MC1 LINE L1 -1254 5079 4927 350 331 42 12 chr2 122552902 122553068 -130703515 + MIR3 SINE MIR 9 179 -29 182 118 29 0 chr2 122553378 122553412 -130703171 + (TAA)n Simple_repeat Simple_repeat 1 35 0 444 325 108 10 chr2 122553428 122553622 -130702961 - MIR SINE MIR -43 219 7 596 204 174 0 chr2 122554315 122554447 -130702136 - MER5A DNA MER1_type -31 158 4 323 293 24 92 chr2 122554726 122554890 -130701693 + L2 LINE L2 3034 3186 -86 463 78 26 0 chr2 122555325 122555402 -130701181 + (TAGA)n Simple_repeat Simple_repeat 2 80 0 432 358 30 10 chr2 122555440 122555641 -130700942 - MIR SINE MIR 0 262 58 412 297 135 10 chr2 122556036 122556237 -130700346 - MIR SINE MIR -5 257 41 299 268 211 0 chr2 122556926 122557049 -130699534 + MIR SINE MIR 100 248 -14 207 194 97 48 chr2 122557510 122557572 -130699011 + MER91A DNA MER1_type 129 193 -3 214 211 39 0 chr2 122557674 122557726 -130698857 - L2 LINE L2 -86 3186 3133 257 311 15 15 chr2 122557848 122557980 -130698603 + GA-rich Low_complexity Low_complexity 2 133 0 318 87 0 0 chr2 122558002 122558048 -130698535 + (TG)n Simple_repeat Simple_repeat 1 46 0 367 294 78 0 chr2 122558085 122558187 -130698396 - MIR SINE MIR -28 234 125 329 272 18 61 chr2 122559273 122559387 -130697196 + L2 LINE L2 3205 3313 0 22 0 0 0 chr2 122560329 122560351 -130696232 + GC_rich Low_complexity Low_complexity 1 22 0 246 296 0 0 chr2 122560762 122560833 -130695750 + C-rich Low_complexity Low_complexity 1 71 0 533 279 27 14 chr2 122613072 122613219 -130643364 - MIR SINE MIR -86 176 28 214 263 12 25 chr2 122613520 122613600 -130642983 + (CATA)n Simple_repeat Simple_repeat 4 82 0 346 286 180 6 chr2 122614599 122614777 -130641806 + MIR SINE MIR 46 254 -8 1183 176 5 9 chr2 122614983 122615193 -130641390 - MER2 DNA MER2_type -136 209 1 208 254 111 0 chr2 122615253 122615316 -130641267 - L2 LINE L2 0 3272 3203 2271 103 6 6 chr2 122615344 122615656 -130640927 + AluSx SINE Alu 1 312 0 1211 108 0 0 chr2 122615768 122615926 -130640657 + AluSg/x SINE Alu 141 298 -14 865 261 177 42 chr2 122616548 122617000 -130639583 - MLT1H LTR MaLR -4 545 33 496 316 7 0 chr2 122618723 122618862 -130637721 - MARNA DNA Mariner -348 238 99 359 335 72 24 chr2 122618926 122619093 -130637490 + L2 LINE L2 3080 3254 -18 1077 185 92 8 chr2 122619294 122619532 -130637051 + MIR SINE MIR 1 258 -4 245 342 77 0 chr2 122620525 122620642 -130635941 - L2 LINE L2 -2 3311 3186 423 275 150 24 chr2 122620643 122620810 -130635773 - MLT1J2 LTR MaLR 0 450 263 273 317 124 32 chr2 122621153 122621557 -130635026 - L2 LINE L2 -353 2961 2521 335 330 142 18 chr2 122621693 122622187 -130634396 - LTR67 LTR ERVL -2 555 1 241 385 29 0 chr2 122622829 122622933 -130633650 - L1MC/D LINE L1 -2231 5577 5471 379 269 74 9 chr2 122623169 122623277 -130633306 + MIR SINE MIR 78 192 -70 438 282 55 0 chr2 122623378 122623541 -130633042 - MIR SINE MIR 0 262 91 288 277 40 20 chr2 122623549 122623650 -130632933 - MIR SINE MIR -111 151 49 272 284 100 63 chr2 122623665 122623904 -130632679 + L2 LINE L2 2809 3056 -216 304 313 12 0 chr2 122623952 122624032 -130632551 + (TG)n Simple_repeat Simple_repeat 2 82 0 226 362 0 0 chr2 122624122 122624191 -130632392 + L2 LINE L2 3244 3312 -1 1272 125 0 0 chr2 122624325 122624520 -130632063 + AluSp SINE Alu 116 310 0 379 332 173 9 chr2 122625916 122626136 -130630447 + L3 LINE CR1 1320 1575 -2 211 308 171 0 chr2 122626446 122626563 -130630020 + MIR SINE MIR 124 260 -2 322 271 59 0 chr2 122627848 122627933 -130628650 + L2 LINE L2 3183 3272 0 280 313 133 30 chr2 122628277 122628443 -130628140 + MIR SINE MIR 68 250 -12 1247 177 0 9 chr2 122628953 122629168 -130627415 - AluJo SINE Alu -13 299 87 235 292 140 64 chr2 122629707 122629878 -130626705 + L2 LINE L2 2871 3054 -218 881 271 16 12 chr2 122630010 122630268 -130626315 + MIR SINE MIR 4 262 0 201 338 44 0 chr2 122630265 122630333 -130626250 + L2 LINE L2 3149 3219 -53 * 1337 210 85 34 chr2 122630626 122631036 -130625547 + MER113 DNA MER1_type? 42 472 -49 1074 269 89 14 chr2 122631838 122632266 -130624317 - LTR16B LTR ERVL 0 464 5 289 120 0 0 chr2 122632719 122632769 -130623814 + LTR33 LTR ERVL 3 52 -469 997 182 0 0 chr2 122632871 122633036 -130623547 - AluSx SINE Alu -146 166 2 499 328 56 16 chr2 122633069 122633319 -130623264 - MIR SINE MIR 0 262 3 317 297 91 30 chr2 122633928 122634093 -130622490 + MER20B DNA MER1_type 2 176 -607 392 219 0 0 chr2 122634415 122634497 -130622086 - MIR SINE MIR -133 129 48 354 342 123 5 chr2 122635142 122635329 -130621254 + MIR SINE MIR 41 249 -13 243 272 0 0 chr2 122637405 122637486 -130619097 + (CA)n Simple_repeat Simple_repeat 1 81 0 195 328 33 0 chr2 122638524 122638585 -130617998 - L2 LINE L2 -273 2999 2937 189 319 0 0 chr2 122638614 122638661 -130617922 - MER5B DNA MER1_type -6 172 126 411 257 28 35 chr2 122638671 122638815 -130617768 + L1ME LINE L1 139 281 -5924 1339 292 49 60 chr2 122639547 122640798 -130615785 + L1ME LINE L1 709 1945 -4451 1098 254 131 11 chr2 122640894 122641414 -130615169 + L1MB1 LINE L1 4813 5394 -988 * 13182 225 36 20 chr2 122641405 122644673 -130611910 + L1ME LINE L1 809 4024 -2191 3055 148 86 37 chr2 122644673 122645012 -130611571 - LTR49 LTR ERV1 0 595 215 1724 168 0 55 chr2 122645012 122645340 -130611243 - AluJo SINE Alu 0 312 3 3055 148 86 37 chr2 122645340 122645567 -130611016 - LTR49 LTR ERV1 -380 215 1 13182 225 36 20 chr2 122645567 122646095 -130610488 + L1ME LINE L1 4024 4542 -1673 2454 97 56 0 chr2 122646095 122646436 -130610147 + L1PA14 LINE L1 5800 6159 -2 13182 225 36 20 chr2 122646436 122647016 -130609567 + L1ME LINE L1 4542 5294 -921 2120 138 31 15 chr2 122647018 122647344 -130609239 + THE1B LTR MaLR 3 333 -31 703 71 0 0 chr2 122647344 122647429 -130609154 - AluY SINE Alu -10 301 217 2039 83 0 11 chr2 122647429 122647694 -130608889 - AluY SINE Alu -49 262 1 355 25 0 0 chr2 122647694 122647734 -130608849 + THE1B LTR MaLR 316 355 0 12622 94 2 1 chr2 122647734 122649312 -130607271 + THE1B-int LTR MaLR 1 1580 0 2206 137 30 35 chr2 122649312 122649678 -130606905 + THE1B LTR MaLR 1 364 0 4860 172 22 27 chr2 122649680 122650612 -130605971 + L1MB1 LINE L1 5458 6403 -1 894 226 187 19 chr2 122650626 122651073 -130605510 + L1ME3A LINE L1 5152 5654 -508 850 211 37 0 chr2 122651104 122651265 -130605318 + AluSg/x SINE Alu 136 302 -10 1436 256 28 28 chr2 122651266 122651665 -130604918 + L1ME3A LINE L1 5694 6092 -78 297 280 120 10 chr2 122651670 122651770 -130604813 + MIR SINE MIR 42 152 -110 1853 138 16 44 chr2 122651972 122652291 -130604292 - AluSx SINE Alu 0 312 3 189 107 0 0 chr2 122653074 122653102 -130603481 + (T)n Simple_repeat Simple_repeat 1 28 0 236 225 150 0 chr2 122653322 122653402 -130603181 + MIR SINE MIR 20 111 -151 1120 174 23 28 chr2 122653462 122653680 -130602903 + MER20 DNA MER1_type 3 219 0 204 311 104 42 chr2 122653812 122654005 -130602578 + L2 LINE L2 1276 1480 -1834 533 226 32 75 chr2 122654133 122654319 -130602264 + MLT1L LTR MaLR 214 391 -224 730 315 96 49 chr2 122654529 122655402 -130601181 + L2 LINE L2 1560 2473 -841 215 301 58 68 chr2 122655739 122655945 -130600638 + L2 LINE L2 2966 3169 -103 282 235 47 12 chr2 122655992 122656077 -130600506 + L2 LINE L2 3118 3205 -67 206 281 114 26 chr2 122656285 122656399 -130600184 - MIR SINE MIR -71 191 68 2505 54 0 7 chr2 122657066 122657362 -130599221 + AluY SINE Alu 1 294 -17 319 221 15 0 chr2 122657861 122657929 -130598654 + L3 LINE CR1 1425 1493 -84 252 138 17 35 chr2 122658461 122658519 -130598064 + L1ME4a LINE L1 6050 6106 -15 431 228 33 0 chr2 122659455 122659547 -130597036 - MER112 DNA MER1_type -4 256 162 6852 86 2 7 chr2 122659559 122660478 -130596105 + L1PA10 LINE L1 5254 6168 0 239 259 82 0 chr2 122660483 122660568 -130596015 - MER112 DNA MER1_type -82 178 87 204 40 0 0 chr2 122660577 122660602 -130595981 + (TG)n Simple_repeat Simple_repeat 2 26 0 298 342 45 0 chr2 122660841 122660952 -130595631 + MER91A DNA MER1_type 1 116 -80 229 273 91 0 chr2 122660977 122661065 -130595518 + MER91A DNA MER1_type 90 185 -11 2187 121 0 10 chr2 122661162 122661469 -130595114 - AluSq SINE Alu -9 304 1 4492 117 55 163 chr2 122662724 122664058 -130592525 + L1MA4 LINE L1 5108 6296 -4 2057 119 16 32 chr2 122664340 122664651 -130591932 - AluSx SINE Alu -6 306 1 423 242 61 76 chr2 122664744 122664845 -130591738 - MIR SINE MIR -8 254 156 2757 167 9 11 chr2 122664845 122665311 -130591272 + MLT1C LTR MaLR 3 467 0 423 242 61 76 chr2 122665311 122665407 -130591176 - MIR SINE MIR -106 156 60 769 207 75 6 chr2 122666280 122666454 -130590129 + MLT1J LTR MaLR 1 186 -325 1010 186 123 30 chr2 122666732 122666968 -130589615 + L1MD1 LINE L1 5984 6241 -1 275 286 84 11 chr2 122667065 122667243 -130589340 - L1ME LINE L1 -330 5791 5601 440 261 56 21 chr2 122667444 122667586 -130588997 + MIR SINE MIR 116 262 0 857 136 0 0 chr2 122667757 122667875 -130588708 + FLAM_C SINE Alu 1 118 -15 307 234 9 28 chr2 122667914 122668021 -130588562 - L1ME LINE L1 -758 5406 5302 2377 74 0 10 chr2 122668034 122668332 -130588251 - AluY SINE Alu -16 295 1 254 179 18 0 chr2 122668380 122668436 -130588147 + (TA)n Simple_repeat Simple_repeat 2 58 0 1486 171 4 42 chr2 122668436 122668700 -130587883 - AluJo SINE Alu -25 287 34 21 0 0 0 chr2 122668901 122668922 -130587661 + AT_rich Low_complexity Low_complexity 1 21 0 588 279 130 26 chr2 122669251 122669681 -130586902 - L1ME1 LINE L1 -255 5911 5437 2155 140 24 0 chr2 122670291 122670627 -130585956 + MER2 DNA MER2_type 1 344 0 205 77 77 0 chr2 122672527 122672566 -130584017 + A-rich Low_complexity Low_complexity 2 43 0 243 146 0 0 chr2 122673834 122673875 -130582708 + (T)n Simple_repeat Simple_repeat 1 41 0 22 0 0 0 chr2 122674321 122674343 -130582240 + GC_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 122674561 122674589 -130581994 + GC_rich Low_complexity Low_complexity 1 28 0 2113 118 0 26 chr2 122676983 122677287 -130579296 + AluY SINE Alu 1 296 -15 290 171 49 12 chr2 122677979 122678143 -130578440 + (TA)n Simple_repeat Simple_repeat 1 170 0 27 62 0 0 chr2 122678143 122678191 -130578392 + AT_rich Low_complexity Low_complexity 1 48 0 366 115 0 0 chr2 122678207 122678259 -130578324 + Charlie1 DNA MER1_type 2708 2759 -2 246 265 96 0 chr2 122679006 122679089 -130577494 - MIR SINE MIR -106 156 66 216 233 22 11 chr2 122679279 122679369 -130577214 + CT-rich Low_complexity Low_complexity 2 92 0 242 226 179 24 chr2 122680818 122680902 -130575681 + MIR SINE MIR 31 127 -135 673 269 137 38 chr2 122680920 122681421 -130575162 + L2 LINE L2 2730 3292 -21 656 249 239 0 chr2 122681704 122681901 -130574682 - MER102a DNA MER1_type 0 330 87 2383 181 42 0 chr2 122681906 122682315 -130574268 + MSTB LTR MaLR 1 426 0 1913 219 57 46 chr2 122682320 122682868 -130573715 - MER68 LTR ERV1 0 562 9 584 226 95 32 chr2 122682897 122683118 -130573465 - L1MC5 LINE L1 -36 7925 7691 261 304 13 0 chr2 122683661 122683740 -130572843 + MIR SINE MIR 74 153 -55 414 260 88 17 chr2 122683747 122683928 -130572655 - L2 LINE L2 -1 3312 3119 241 280 51 122 chr2 122683960 122684174 -130572409 - MIR SINE MIR -16 246 48 999 199 52 39 chr2 122684296 122684582 -130572001 - LTR16A1 LTR ERVL 0 457 168 2859 13 0 0 chr2 122685286 122685593 -130570990 + AluY SINE Alu 1 307 -4 465 19 0 0 chr2 122685653 122685707 -130570876 + (TG)n Simple_repeat Simple_repeat 1 54 0 1666 198 11 0 chr2 122685707 122685985 -130570598 - AluJo SINE Alu -31 281 1 1214 262 102 35 chr2 122686017 122686440 -130570143 - MER77 LTR ERV1 -6 599 149 373 225 34 11 chr2 122686700 122686789 -130569794 + MIR SINE MIR 31 121 -141 203 265 20 0 chr2 122687147 122687196 -130569387 - L2 LINE L2 -213 3059 3010 335 215 35 40 chr2 122687212 122687335 -130569248 + MER5A DNA MER1_type 7 137 -52 209 284 45 23 chr2 122687847 122687935 -130568648 - MIR3 SINE MIR -48 160 71 337 331 41 0 chr2 122689386 122689507 -130567076 + MER91A DNA MER1_type 1 126 -70 183 219 171 61 chr2 122690275 122690357 -130566226 - L2 LINE L2 -841 2473 2383 302 263 77 58 chr2 122690371 122690527 -130566056 - MIR SINE MIR -1 261 103 2059 232 124 11 chr2 122690615 122691170 -130565413 + MLT2F LTR ERVL 1 618 -45 258 242 0 32 chr2 122691176 122691320 -130565263 + (TATATG)n Simple_repeat Simple_repeat 1 139 0 531 45 0 0 chr2 122691322 122691388 -130565195 + (TCTA)n Simple_repeat Simple_repeat 3 68 0 240 132 0 0 chr2 122691389 122691427 -130565156 + MLT2F LTR ERVL 623 660 -3 2419 80 0 13 chr2 122692381 122692694 -130563889 + AluY SINE Alu 1 309 -2 201 282 14 28 chr2 122694014 122694085 -130562498 + MIR SINE MIR 85 154 -108 23 33 0 0 chr2 122694193 122694223 -130562360 + AT_rich Low_complexity Low_complexity 1 30 0 391 191 16 71 chr2 122694653 122694836 -130561747 + (TTATA)n Simple_repeat Simple_repeat 1 173 0 413 278 89 22 chr2 122694884 122695064 -130561519 - MIR SINE MIR -70 192 1 186 143 0 0 chr2 122695156 122695191 -130561392 + (TG)n Simple_repeat Simple_repeat 2 36 0 314 346 39 7 chr2 122698713 122698866 -130557717 + MIR SINE MIR 32 189 -73 2287 90 0 3 chr2 122699627 122699915 -130556668 - AluSg SINE Alu -11 299 13 307 241 120 19 chr2 122700377 122700485 -130556098 - L2 LINE L2 0 3313 3195 340 250 29 37 chr2 122701958 122702094 -130554489 - MER117 DNA MER1_type -31 166 32 1861 172 3 7 chr2 122702119 122702421 -130554162 + AluJb SINE Alu 1 301 -11 480 35 0 0 chr2 122702422 122702480 -130554103 + (GGAA)n Simple_repeat Simple_repeat 2 59 0 184 425 43 0 chr2 122702497 122702591 -130553992 + L2 LINE L2 3161 3258 -14 6054 161 39 12 chr2 122702798 122704012 -130552571 - L1MC1 LINE L1 0 6333 5079 2131 124 3 3 chr2 122704012 122704319 -130552264 + AluSx SINE Alu 1 307 -5 6054 161 39 12 chr2 122704319 122704477 -130552106 - L1MC1 LINE L1 -1254 5079 4927 335 331 42 12 chr2 122704499 122704665 -130551918 + MIR3 SINE MIR 9 179 -29 182 118 29 0 chr2 122704975 122705009 -130551574 + (TAA)n Simple_repeat Simple_repeat 1 35 0 447 320 108 10 chr2 122705025 122705219 -130551364 - MIR SINE MIR -43 219 7 585 204 174 0 chr2 122705916 122706048 -130550535 - MER5A DNA MER1_type -31 158 4 199 239 22 0 chr2 122706445 122706491 -130550092 + L2 LINE L2 3181 3227 -86 463 78 26 0 chr2 122706926 122707003 -130549580 + (TAGA)n Simple_repeat Simple_repeat 2 80 0 393 358 30 10 chr2 122707041 122707242 -130549341 - MIR SINE MIR 0 262 58 377 297 135 10 chr2 122707637 122707838 -130548745 - MIR SINE MIR -5 257 41 281 268 211 0 chr2 122708527 122708650 -130547933 + MIR SINE MIR 100 248 -14 207 194 97 48 chr2 122709111 122709173 -130547410 + MER91A DNA MER1_type 129 193 -3 214 211 39 0 chr2 122709275 122709327 -130547256 - L2 LINE L2 -86 3186 3133 257 311 15 15 chr2 122709449 122709581 -130547002 + GA-rich Low_complexity Low_complexity 2 133 0 318 87 0 0 chr2 122709603 122709649 -130546934 + (TG)n Simple_repeat Simple_repeat 1 46 0 346 294 78 0 chr2 122709686 122709788 -130546795 - MIR SINE MIR -28 234 125 317 272 18 61 chr2 122710874 122710988 -130545595 + L2 LINE L2 3205 3313 0 22 0 0 0 chr2 122711930 122711952 -130544631 + GC_rich Low_complexity Low_complexity 1 22 0 563 197 21 1 chr2 122712717 122712845 -130543738 - MLT1B LTR MaLR -1 379 242 1360 284 105 27 chr2 122712849 122713715 -130542868 - L1M4 LINE L1 -979 5167 4234 268 250 97 35 chr2 122713747 122713764 -130542819 - L1MA10 LINE L1 -2 6332 6316 2269 222 103 34 chr2 122713764 122714417 -130542166 - L1ME2 LINE L1 -10 6154 5457 912 229 32 28 chr2 122714414 122714632 -130541951 - L1ME1 LINE L1 -14 6152 5934 * 800 226 21 0 chr2 122714630 122714820 -130541763 - L1ME2 LINE L1 -685 5489 5296 * 1382 249 111 31 chr2 122714813 122715427 -130541156 - L1ME2 LINE L1 -1444 4702 4040 277 327 115 43 chr2 122715434 122715853 -130540730 - L1ME2 LINE L1 -2369 3777 3329 315 0 0 0 chr2 122716048 122716083 -130540500 + (TG)n Simple_repeat Simple_repeat 1 35 0 231 36 0 0 chr2 122716228 122716256 -130540327 + (GA)n Simple_repeat Simple_repeat 1 28 0 421 345 122 13 chr2 122716264 122716502 -130540081 + L3 LINE CR1 1229 1492 -85 300 309 0 0 chr2 122716500 122716568 -130540015 - L2 LINE L2 -1 3271 3204 * 299 293 172 0 chr2 122716854 122716953 -130539630 + MIR SINE MIR 30 145 -63 444 251 65 22 chr2 122717464 122717608 -130538975 + MIR SINE MIR 33 184 -64 185 185 86 86 chr2 122718377 122718458 -130538125 + L3 LINE CR1 1080 1160 -417 448 274 186 25 chr2 122718768 122718966 -130537617 + MIR SINE MIR 2 221 -41 2385 177 24 22 chr2 122719065 122719528 -130537055 + MLT1C LTR MaLR 1 464 -3 234 333 68 7 chr2 122720644 122720791 -130535792 + MIR3 SINE MIR 20 175 -33 364 314 107 37 chr2 122721076 122721305 -130535278 + MIR SINE MIR 19 259 -3 26 0 0 0 chr2 122722325 122722351 -130534232 + AT_rich Low_complexity Low_complexity 1 26 0 694 292 34 21 chr2 122722932 122723168 -130533415 + MIR SINE MIR 23 261 -1 597 288 62 11 chr2 122723436 122723613 -130532970 + MIR3 SINE MIR 16 201 -7 332 352 96 23 chr2 122724413 122724632 -130531951 + MIR SINE MIR 6 240 -22 2024 200 75 45 chr2 122725948 122726132 -130530451 - MLT1D LTR MaLR 0 505 328 1825 95 109 18 chr2 122726132 122726415 -130530168 - AluSc SINE Alu 0 309 1 2024 200 75 45 chr2 122726415 122726720 -130529863 - MLT1D LTR MaLR -177 328 1 186 103 0 0 chr2 122726768 122726797 -130529786 + (TTCC)n Simple_repeat Simple_repeat 3 31 0 3939 142 31 23 chr2 122727688 122727946 -130528637 + MER39B LTR ERV1 1 255 -398 2208 110 3 10 chr2 122727946 122728254 -130528329 + AluY SINE Alu 1 306 -5 3939 142 31 23 chr2 122728254 122728643 -130527940 + MER39B LTR ERV1 255 653 0 186 43 0 0 chr2 122729531 122729554 -130527029 + (TC)n Simple_repeat Simple_repeat 2 24 0 1332 187 8 12 chr2 122730222 122730463 -130526120 + AluJb SINE Alu 28 267 -45 201 74 0 0 chr2 122731851 122731878 -130524705 + (TTTTC)n Simple_repeat Simple_repeat 2 28 0 228 111 0 0 chr2 122732820 122732856 -130523727 + (GGAA)n Simple_repeat Simple_repeat 3 38 0 396 346 56 22 chr2 122733670 122733901 -130522682 - L2 LINE L2 -18 3295 3057 738 232 185 21 chr2 122734468 122734799 -130521784 + LTR16A LTR ERVL 17 437 -13 21 0 0 0 chr2 122735404 122735425 -130521158 + AT_rich Low_complexity Low_complexity 1 21 0 388 370 20 14 chr2 122736366 122736512 -130520071 + MIR SINE MIR 3 149 -113 522 107 10 97 chr2 122737128 122737231 -130519352 + MER53 DNA DNA 95 188 -1 1165 283 142 15 chr2 122737257 122738058 -130518525 - L2 LINE L2 -94 3219 2309 290 368 41 32 chr2 122738059 122738279 -130518304 - L2 LINE L2 -437 2877 2656 255 363 69 0 chr2 122738506 122738608 -130517975 + L2 LINE L2 3164 3272 0 335 211 0 43 chr2 122738664 122738761 -130517822 - Charlie8 DNA MER1_type -989 1428 1358 972 216 91 100 chr2 122738793 122739245 -130517338 - MLT1D LTR MaLR -9 496 5 359 305 26 19 chr2 122739264 122739418 -130517165 - MIR3 SINE MIR -20 188 34 293 264 22 22 chr2 122740150 122740241 -130516342 - L1MC4 LINE L1 -1338 6704 6614 326 235 110 22 chr2 122740816 122740952 -130515631 - Charlie8 DNA MER1_type -2132 285 138 440 271 174 13 chr2 122741376 122741531 -130515052 - MER5A DNA MER1_type 0 189 10 629 308 106 7 chr2 122741541 122741843 -130514740 + MER115 DNA AcHobo 54 385 -308 262 224 60 0 chr2 122741843 122741910 -130514673 + MER5A DNA MER1_type 117 187 -2 226 308 99 22 chr2 122742047 122742138 -130514445 + MIR3 SINE MIR 60 157 -51 443 189 21 0 chr2 122742387 122742482 -130514101 - MER5A DNA MER1_type -83 106 10 456 305 75 5 chr2 122742663 122742850 -130513733 - Charlie8 DNA MER1_type -2143 274 75 489 313 79 14 chr2 122743637 122743851 -130512732 + MIR SINE MIR 35 262 0 10170 218 62 27 chr2 122744159 122744432 -130512151 + L1MD1 LINE L1 20 282 -6354 267 103 0 0 chr2 122744432 122744471 -130512112 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 10170 218 62 27 chr2 122744471 122749139 -130507444 + L1MD1 LINE L1 282 4783 -1853 1863 157 16 3 chr2 122749139 122749444 -130507139 + AluSg SINE Alu 1 309 -1 1781 127 49 22 chr2 122749449 122749533 -130507050 + AluSx SINE Alu 39 119 -193 441 0 0 0 chr2 122749533 122749582 -130507001 + (TTAAA)n Simple_repeat Simple_repeat 1 49 0 1781 127 49 22 chr2 122749582 122749764 -130506819 + AluSx SINE Alu 119 312 0 10170 218 62 27 chr2 122749764 122750675 -130505908 + L1MD1 LINE L1 4786 6374 -262 391 203 76 0 chr2 122750777 122750856 -130505727 + MER3 DNA MER1_type 125 209 0 842 278 89 34 chr2 122750857 122751238 -130505345 + LTR33 LTR ERVL 114 515 -6 290 246 98 76 chr2 122751313 122751590 -130504993 - HAL1 LINE L1 -56 2451 2169 277 323 32 26 chr2 122751659 122751814 -130504769 - HAL1b LINE L1 -442 906 751 650 188 36 7 chr2 122752086 122752224 -130504359 - L1PA16 LINE L1 -1 6165 6024 27126 28 15 2 chr2 122752224 122758244 -130498339 - L1PA2 LINE L1 -8 6147 2 2174 153 23 26 chr2 122758247 122758312 -130498271 - L1PB4 LINE L1 -117 6039 5975 2035 103 18 0 chr2 122758312 122758585 -130497998 - AluSx SINE Alu -13 299 22 2174 153 23 26 chr2 122758585 122758910 -130497673 - L1PB4 LINE L1 -181 5975 5650 254 187 11 0 chr2 122759269 122759360 -130497223 + (TA)n Simple_repeat Simple_repeat 1 92 0 1909 179 0 3 chr2 122759362 122759658 -130496925 - AluJb SINE Alu -17 295 1 228 182 26 78 chr2 122759661 122759738 -130496845 - HAL1 LINE L1 -810 1697 1625 376 118 40 0 chr2 122759748 122759824 -130496759 + CT-rich Low_complexity Low_complexity 1 79 0 437 259 102 10 chr2 122759824 122760021 -130496562 - HAL1 LINE L1 -844 1663 1449 2350 48 0 7 chr2 122760276 122760566 -130496017 - L1PA8 LINE L1 0 6172 5885 254 269 222 19 chr2 122760593 122760701 -130495882 - MARNA DNA Mariner -438 148 19 251 282 52 6 chr2 122760827 122760961 -130495622 - MIR SINE MIR -57 151 16 1953 121 0 0 chr2 122762368 122762644 -130493939 + AluSg SINE Alu 28 303 0 1932 200 66 16 chr2 122762962 122763402 -130493181 - MLT1C LTR MaLR 0 467 6 1311 7 0 0 chr2 122763787 122763930 -130492653 + AluYa5/8 SINE Alu 168 310 0 204 67 0 0 chr2 122764489 122764519 -130492064 + (T)n Simple_repeat Simple_repeat 1 30 0 1819 250 97 10 chr2 122766154 122766755 -130489828 - L1ME3A LINE L1 -155 6015 5363 290 329 107 25 chr2 122766917 122767197 -130489386 + L3 LINE CR1 1062 1364 -213 351 195 97 16 chr2 122767599 122767748 -130488835 + MLT1J2 LTR MaLR 63 218 -191 444 296 102 65 chr2 122769887 122770259 -130486324 + HAL1 LINE L1 1043 1428 -1079 2302 98 0 0 chr2 122770284 122770579 -130486004 + AluSx SINE Alu 16 310 -2 1598 128 31 81 chr2 122771625 122771945 -130484638 - AluJo SINE Alu -8 304 1 2354 96 3 0 chr2 122772546 122772849 -130483734 + AluSp SINE Alu 1 304 -9 241 306 57 0 chr2 122772966 122773090 -130483493 + MIR SINE MIR 84 214 -48 210 179 0 0 chr2 122774092 122774148 -130482435 + (CA)n Simple_repeat Simple_repeat 1 56 0 315 326 23 39 chr2 122775221 122775350 -130481233 - MIR3 SINE MIR -15 193 67 310 251 34 89 chr2 122775557 122775736 -130480847 - MIR SINE MIR -48 214 46 522 293 160 13 chr2 122776417 122776717 -130479866 - MLT1K LTR MaLR -51 537 194 229 301 14 0 chr2 122776863 122776936 -130479647 + GA-rich Low_complexity Low_complexity 6 79 0 182 364 0 0 chr2 122777525 122777591 -130478992 - L3b LINE CR1 -134 1449 1384 7511 61 1 0 chr2 122828535 122829826 -130426757 + L1PA6 LINE L1 4867 6158 0 455 252 104 2 chr2 122830038 122830202 -130426381 + MIR SINE MIR 38 214 -48 21 36 0 0 chr2 122832322 122832350 -130424233 + AT_rich Low_complexity Low_complexity 1 28 0 206 167 24 0 chr2 122832418 122832460 -130424123 + (TGAA)n Simple_repeat Simple_repeat 3 45 0 33382 94 15 11 chr2 122832483 122833053 -130423530 + L1P LINE L1 1 567 -5579 1947 117 7 42 chr2 122833053 122833362 -130423221 + AluY SINE Alu 1 298 -13 33382 94 15 11 chr2 122833362 122837504 -130419079 + L1P LINE L1 567 4735 -1411 237 302 86 29 chr2 122838297 122838436 -130418147 + L2 LINE L2 3167 3313 0 315 336 81 51 chr2 122839233 122839704 -130416879 + L2 LINE L2 2717 3205 -108 1956 272 96 54 chr2 122839776 122841531 -130415052 + L1MCc LINE L1 30 2169 -4953 201 94 0 0 chr2 122841531 122841563 -130415020 + (CA)n Simple_repeat Simple_repeat 1 32 0 1956 272 96 54 chr2 122841563 122842001 -130414582 + L1MCc LINE L1 2169 2587 -4535 2131 226 37 2 chr2 122842006 122842466 -130414117 + L1MB8 LINE L1 5381 5856 -322 1137 265 63 16 chr2 122842471 122842917 -130413666 + L1M4 LINE L1 3636 4102 -2044 453 256 58 7 chr2 122842918 122843055 -130413528 + L1M4 LINE L1 4025 4168 -1978 567 213 57 16 chr2 122843067 122843189 -130413394 - MLT1C LTR MaLR 0 467 341 302 392 8 0 chr2 122843455 122843580 -130413003 - MIR3 SINE MIR -36 172 47 336 330 26 44 chr2 122845554 122845716 -130410867 + MIR SINE MIR 3 159 -49 27 51 0 17 chr2 122847710 122847732 -130408851 + AT_rich Low_complexity Low_complexity 1 22 -36 306 106 0 0 chr2 122847732 122847779 -130408804 + L1MA4A LINE L1 6251 6297 -6 27 51 0 17 chr2 122847779 122847815 -130408768 + AT_rich Low_complexity Low_complexity 22 58 0 1537 286 129 19 chr2 122847919 122848483 -130408100 - MLT1E2 LTR MaLR 0 626 1 372 197 13 26 chr2 122848483 122848558 -130408025 - MLT1J1 LTR MaLR -40 406 333 554 246 162 0 chr2 122848605 122848784 -130407799 - L2 LINE L2 -1341 1973 1766 27 81 0 0 chr2 122849019 122849081 -130407502 + AT_rich Low_complexity Low_complexity 1 62 0 385 364 71 15 chr2 122849295 122849493 -130407090 + MIR SINE MIR 33 241 -21 1246 192 9 9 chr2 122850024 122850238 -130406345 - MER20 DNA MER1_type -1 218 5 186 167 0 0 chr2 122852990 122853026 -130403557 + GA-rich Low_complexity Low_complexity 1 36 0 414 0 0 0 chr2 122853346 122853392 -130403191 + (CA)n Simple_repeat Simple_repeat 1 46 0 1803 171 46 51 chr2 122854153 122854503 -130402080 + MER7A DNA MER2_type 1 346 0 303 296 114 0 chr2 122855171 122855303 -130401280 - MIR SINE MIR -9 253 107 399 259 123 25 chr2 122855328 122855490 -130401093 + MER96B DNA MER1_type? 2 179 -238 1373 158 91 44 chr2 122856146 122856444 -130400139 - AluJo SINE Alu 0 312 1 402 216 31 10 chr2 122856677 122856774 -130399809 + MIR SINE MIR 102 200 -62 198 265 182 38 chr2 122856920 122857052 -130399531 - MIR SINE MIR 0 262 112 617 244 29 17 chr2 122858023 122858195 -130398388 - MER117 DNA MER1_type -17 180 7 282 308 37 0 chr2 122858291 122858398 -130398185 + MIR SINE MIR 75 185 -77 23 0 0 0 chr2 122858404 122858427 -130398156 + AT_rich Low_complexity Low_complexity 1 23 0 818 188 0 0 chr2 122858427 122858555 -130398028 - FLAM_C SINE Alu -5 128 1 1588 183 0 18 chr2 122859050 122859323 -130397260 - AluJo SINE Alu -44 268 1 309 193 237 9 chr2 122859392 122859506 -130397077 - LTR33 LTR ERVL 0 521 382 289 246 158 60 chr2 122859547 122859762 -130396821 + MER106A DNA MER1_type 1 236 0 619 281 112 30 chr2 122859765 122860032 -130396551 - LTR33 LTR ERVL -227 294 6 585 313 162 26 chr2 122860059 122860528 -130396055 + L2 LINE L2 2771 3313 0 783 244 57 39 chr2 122860548 122860777 -130395806 + MIR SINE MIR 18 250 -12 315 227 69 152 chr2 122863216 122863493 -130393090 + MER112 DNA MER1_type 1 254 -6 203 169 17 85 chr2 122863524 122863583 -130393000 + CT-rich Low_complexity Low_complexity 3 57 0 616 266 70 30 chr2 122863694 122864084 -130392499 - L1ME LINE L1 -536 5626 5218 370 296 99 25 chr2 122864213 122864689 -130391894 - L1ME LINE L1 -1319 4827 4317 1402 230 36 50 chr2 122864807 122865906 -130390677 - L1ME LINE L1 -438 5711 4554 1364 176 69 31 chr2 122865903 122866221 -130390362 + L1ME1 LINE L1 5696 6025 -141 * 410 229 21 36 chr2 122866432 122866572 -130390011 + L1MA9 LINE L1 6175 6312 0 297 233 0 0 chr2 122866735 122866825 -130389758 + CT-rich Low_complexity Low_complexity 3 92 0 1004 80 0 0 chr2 122866873 122867011 -130389572 - AluY SINE Alu 0 311 174 835 58 0 108 chr2 122867027 122867166 -130389417 - AluYb8 SINE Alu -115 203 80 436 363 49 21 chr2 122867173 122867639 -130388944 - L1ME LINE L1 -2191 3938 3457 318 237 21 0 chr2 122867881 122867978 -130388605 + (TA)n Simple_repeat Simple_repeat 1 99 0 473 287 120 43 chr2 122868015 122868273 -130388310 - L1ME LINE L1 -2817 3312 3035 313 251 60 55 chr2 122868316 122868499 -130388084 - L1ME LINE L1 -5035 1084 901 * 540 319 76 30 chr2 122868494 122869019 -130387564 - L1MEc LINE L1 -4635 1625 1109 27 49 0 0 chr2 122870030 122870071 -130386512 + AT_rich Low_complexity Low_complexity 1 41 0 32801 110 14 55 chr2 122871394 122877805 -130378778 - L1PA7 LINE L1 -1 6153 9 483 297 55 0 chr2 122878492 122878620 -130377963 - L2 LINE L2 -1 3271 3137 451 332 96 8 chr2 122879268 122879508 -130377075 - MIR SINE MIR -6 256 2 21 57 0 0 chr2 122879860 122879895 -130376688 + AT_rich Low_complexity Low_complexity 1 35 0 188 341 12 47 chr2 122879910 122879995 -130376588 - L2 LINE L2 -70 3202 3121 255 340 56 19 chr2 122880133 122880295 -130376288 - L2 LINE L2 -301 2971 2804 464 197 33 33 chr2 122881139 122881261 -130375322 + MER53 DNA DNA 1 122 -67 309 378 47 0 chr2 122881298 122881425 -130375158 - L2 LINE L2 -14 3258 3126 400 347 50 40 chr2 122881497 122881820 -130374763 + L1MC4a LINE L1 3693 4018 -2128 360 0 0 0 chr2 122881883 122881923 -130374660 + (TG)n Simple_repeat Simple_repeat 2 41 0 252 336 89 0 chr2 122881928 122882074 -130374509 + L1MC4a LINE L1 4015 4173 -1973 34 24 0 0 chr2 122882088 122882129 -130374454 + AT_rich Low_complexity Low_complexity 1 41 0 932 240 0 0 chr2 122882898 122883069 -130373514 + FAM SINE Alu 1 171 -4 703 281 107 77 chr2 122883152 122883725 -130372858 + L1MC4a LINE L1 5264 5853 -1955 324 325 156 14 chr2 122885071 122885283 -130371300 + MIR SINE MIR 21 262 0 912 242 22 9 chr2 122885318 122885541 -130371042 + MIR SINE MIR 28 253 -9 4367 144 77 4 chr2 122885570 122885903 -130370680 - L1PA16 LINE L1 0 6166 5859 216 0 0 0 chr2 122885903 122885927 -130370656 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4367 144 77 4 chr2 122885927 122886357 -130370226 - L1PA16 LINE L1 -307 5859 5347 291 28 0 0 chr2 122886557 122886593 -130369990 + (CA)n Simple_repeat Simple_repeat 1 36 0 212 0 0 35 chr2 122887101 122887130 -130369453 + (TTTTG)n Simple_repeat Simple_repeat 5 32 0 1641 203 35 9 chr2 122887130 122887445 -130369138 + MER2 DNA MER2_type 16 338 -7 426 266 18 0 chr2 122887872 122887985 -130368598 - MIR SINE MIR -47 215 101 1388 136 5 5 chr2 122887995 122888209 -130368374 - AluSg/x SINE Alu -13 299 86 347 25 0 0 chr2 122888209 122888249 -130368334 + AluY SINE Alu 13 52 -248 366 246 154 0 chr2 122888330 122888440 -130368143 + MIR SINE MIR 117 243 -19 191 233 23 0 chr2 122888835 122888878 -130367705 + MIR SINE MIR 111 154 -108 279 197 165 71 chr2 122889026 122889153 -130367430 + L2 LINE L2 3174 3312 -1 209 359 60 34 chr2 122889430 122889547 -130367036 + L2 LINE L2 3193 3312 -1 343 283 59 27 chr2 122889610 122889829 -130366754 + L1ME4a LINE L1 5717 5942 -179 222 317 10 19 chr2 122890434 122890538 -130366045 + CT-rich Low_complexity Low_complexity 2 104 0 2488 35 7 0 chr2 122891364 122891651 -130364932 + AluY SINE Alu 18 306 -5 26 30 0 0 chr2 122891838 122891871 -130364712 + AT_rich Low_complexity Low_complexity 1 33 0 242 319 134 49 chr2 122891923 122892115 -130364468 - MIR3 SINE MIR -49 213 9 2204 101 10 0 chr2 122892291 122892588 -130363995 - AluSq SINE Alu -13 300 1 323 288 67 9 chr2 122893070 122893232 -130363351 - MIR3 SINE MIR -7 201 28 401 204 45 11 chr2 122893308 122893396 -130363187 + MIR SINE MIR 153 243 -19 379 299 31 8 chr2 122894397 122894524 -130362059 - MIR SINE MIR 0 262 133 402 21 0 0 chr2 122896955 122897002 -130359581 + (TG)n Simple_repeat Simple_repeat 2 48 0 2102 90 14 0 chr2 122897964 122898242 -130358341 - AluSp SINE Alu -11 302 21 1023 195 31 20 chr2 122898370 122898565 -130358018 + MER2 DNA MER2_type 4 200 -145 718 196 36 0 chr2 122898692 122898830 -130357753 + MER2 DNA MER2_type 203 345 0 194 284 49 59 chr2 122898830 122898932 -130357651 - MIR SINE MIR -58 204 104 181 292 69 0 chr2 122899054 122899126 -130357457 - MIR SINE MIR -68 194 118 22 0 0 0 chr2 122899130 122899152 -130357431 + AT_rich Low_complexity Low_complexity 1 22 0 591 226 32 0 chr2 122900154 122900278 -130356305 + L2 LINE L2 3186 3313 0 25 0 0 0 chr2 122900763 122900788 -130355795 + AT_rich Low_complexity Low_complexity 1 25 0 234 175 28 63 chr2 122901086 122901229 -130355354 + (TAA)n Simple_repeat Simple_repeat 3 140 0 22 0 0 0 chr2 122902237 122902259 -130354324 + AT_rich Low_complexity Low_complexity 1 22 0 1573 163 16 8 chr2 122902584 122902878 -130353705 - AluJo SINE Alu 0 317 22 1251 277 92 48 chr2 122903653 122904217 -130352366 + MLT1G1 LTR MaLR 1 589 -6 182 214 18 54 chr2 122904226 122904282 -130352301 + MIR SINE MIR 89 142 -66 297 313 153 0 chr2 122904851 122904995 -130351588 + L2 LINE L2 3087 3252 -20 2191 89 18 0 chr2 122905179 122905461 -130351122 + AluSc SINE Alu 1 287 -22 1000 242 40 55 chr2 122905461 122905745 -130350838 - MER93a LTR ERV1 -8 394 114 185 0 0 39 chr2 122905745 122905771 -130350812 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1000 242 40 55 chr2 122905771 122905812 -130350771 - MER93a LTR ERV1 -288 114 74 5576 16 0 0 chr2 122906032 122906661 -130349922 - L1P1 LINE L1 -1444 4702 4074 * 6069 28 0 1 chr2 122906657 122907762 -130348821 + L1P1 LINE L1 4678 5781 -374 231 114 0 0 chr2 122907875 122907910 -130348673 + (A)n Simple_repeat Simple_repeat 1 35 0 653 266 137 17 chr2 122907942 122908175 -130348408 - MIR SINE MIR -1 261 1 2160 112 20 0 chr2 122908435 122908729 -130347854 + AluSx SINE Alu 1 300 -12 186 302 19 0 chr2 122909183 122909236 -130347347 + MIR SINE MIR 42 95 -113 188 235 20 39 chr2 122909250 122909301 -130347282 + L3 LINE CR1 1512 1561 -16 260 103 0 0 chr2 122909506 122909545 -130347038 - L1MA8 LINE L1 -33 6258 6220 * 1274 164 18 0 chr2 122909538 122909758 -130346825 + L1MA8 LINE L1 5932 6155 -136 932 203 0 0 chr2 122909759 122909917 -130346666 + AluJo SINE Alu 125 282 -30 188 83 0 28 chr2 122909920 122909956 -130346627 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 405 56 19 0 chr2 122909957 122910011 -130346572 + L1MA8 LINE L1 6163 6217 -74 496 234 102 15 chr2 122912302 122912439 -130344144 + MER5B DNA MER1_type 27 175 -3 21 0 0 0 chr2 122912715 122912736 -130343847 + AT_rich Low_complexity Low_complexity 1 21 0 3480 183 16 10 chr2 122913433 122914051 -130342532 - LTR26E LTR ERV1 0 622 1 21 0 0 0 chr2 122914802 122914823 -130341760 + AT_rich Low_complexity Low_complexity 1 21 0 249 289 218 21 chr2 122915844 122915986 -130340597 + MER5B DNA MER1_type 4 173 -5 192 282 167 0 chr2 122916272 122916350 -130340233 - MIR SINE MIR -76 186 96 509 286 75 25 chr2 122916851 122917050 -130339533 + MIR SINE MIR 47 255 -7 187 311 68 40 chr2 122917221 122917443 -130339140 + L2 LINE L2 2552 2779 -535 555 212 134 51 chr2 122917794 122918011 -130338572 - MIR SINE MIR 0 262 28 193 246 15 77 chr2 122917978 122918043 -130338540 + L2 LINE L2 3203 3263 -9 * 590 231 160 0 chr2 122919632 122919788 -130336795 - MER5A DNA MER1_type -6 183 3 231 309 29 33 chr2 122920309 122920453 -130336130 - MIR SINE MIR -57 151 7 192 300 43 14 chr2 122920856 122920926 -130335657 - MER5A DNA MER1_type -5 184 113 1942 100 53 37 chr2 122921554 122921897 -130334686 + AluSp SINE Alu 6 353 0 827 98 22 49 chr2 122921900 122922084 -130334499 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 332 283 17 25 chr2 122922822 122922942 -130333641 - L1ME1 LINE L1 -94 6072 5954 702 197 8 0 chr2 122923002 122923134 -130333449 + L1PA16 LINE L1 6034 6166 0 328 347 111 17 chr2 122923489 122923786 -130332797 - L2 LINE L2 -478 2836 2512 182 308 15 0 chr2 122923783 122923848 -130332735 - MIR SINE MIR -152 110 45 * 464 286 54 36 chr2 122923841 122923924 -130332659 + MIR SINE MIR 77 157 -105 1816 227 41 41 chr2 122923924 122924386 -130332197 + LTR40b LTR ERVL 1 462 0 464 286 54 36 chr2 122924386 122924470 -130332113 + MIR SINE MIR 157 247 -15 420 198 42 0 chr2 122924520 122924616 -130331967 + MIR SINE MIR 32 131 -131 390 91 0 0 chr2 122924906 122924961 -130331622 + (ATG)n Simple_repeat Simple_repeat 2 56 0 211 329 12 0 chr2 122924961 122925046 -130331537 - MIR SINE MIR -10 252 167 269 150 0 0 chr2 122925050 122925090 -130331493 + tRNA-Met-e tRNA tRNA 1 40 -35 1615 183 42 0 chr2 122925660 122925837 -130330746 - AluJo SINE Alu -16 296 101 342 80 0 0 chr2 122925837 122925887 -130330696 + (TG)n Simple_repeat Simple_repeat 2 51 0 1615 183 42 0 chr2 122925887 122925993 -130330590 - AluJo SINE Alu -211 101 1 569 282 71 47 chr2 122926031 122926286 -130330297 - MLT1L LTR MaLR -354 261 1 281 315 120 0 chr2 122926607 122926715 -130329868 - MIR SINE MIR -132 130 10 254 313 88 0 chr2 122926826 122926906 -130329677 - MIR SINE MIR -71 137 51 1814 69 0 0 chr2 122927504 122927722 -130328861 + L1PA8 LINE L1 5953 6170 -2 189 0 0 0 chr2 122928208 122928229 -130328354 + (CAA)n Simple_repeat Simple_repeat 1 21 0 282 345 9 17 chr2 122928250 122928366 -130328217 - MIR3 SINE MIR -4 204 90 4226 175 26 33 chr2 122928367 122929218 -130327365 + L1MB8 LINE L1 5334 6178 0 207 267 0 0 chr2 122929353 122929439 -130327144 + (CA)n Simple_repeat Simple_repeat 1 86 0 277 309 114 30 chr2 122930159 122930360 -130326223 + MLT1L LTR MaLR 335 552 -36 408 271 44 74 chr2 122931223 122931562 -130325021 + L1M4 LINE L1 3868 4196 -1950 273 231 26 13 chr2 122931868 122931946 -130324637 + HsTC2 DNA Tc2 1 79 -1819 26 64 0 0 chr2 122932959 122933006 -130323577 + AT_rich Low_complexity Low_complexity 1 47 0 617 228 29 0 chr2 122933006 122933142 -130323441 - MIR SINE MIR -5 257 118 2356 89 0 0 chr2 122933144 122933437 -130323146 - AluSc SINE Alu -16 293 1 306 255 43 96 chr2 122933739 122933947 -130322636 + L1ME LINE L1 1028 1224 -5160 234 172 58 11 chr2 122934002 122934089 -130322494 + (TA)n Simple_repeat Simple_repeat 2 92 0 482 250 101 19 chr2 122934094 122934302 -130322281 + L1ME LINE L1 1410 1634 -4929 679 194 124 84 chr2 122934360 122934581 -130322002 + L1MC3 LINE L1 6822 7058 -727 387 113 0 0 chr2 122934581 122934643 -130321940 + (TAGA)n Simple_repeat Simple_repeat 1 62 0 679 194 124 84 chr2 122934643 122934694 -130321889 + L1MC3 LINE L1 7058 7105 -680 305 294 0 12 chr2 122934698 122934783 -130321800 + MLT1F1 LTR MaLR 48 131 -436 2748 177 56 14 chr2 122934783 122935341 -130321242 + L1MC3 LINE L1 7205 7785 0 1047 275 107 45 chr2 122935333 122935705 -130320878 + L1ME LINE L1 1618 1965 -4598 * 2455 50 7 0 chr2 122935705 122936003 -130320580 + AluY SINE Alu 1 300 -11 1047 275 107 45 chr2 122936003 122936058 -130320525 + L1ME LINE L1 1965 2015 -4548 1569 194 6 19 chr2 122936058 122936372 -130320211 + AluJo SINE Alu 3 312 0 1047 275 107 45 chr2 122936372 122936904 -130319679 + L1ME LINE L1 2015 2638 -3925 3312 270 65 39 chr2 122936905 122939266 -130317317 + L1ME LINE L1 3013 5584 -798 244 236 0 0 chr2 122939270 122939325 -130317258 + L1ME LINE L1 5819 5873 -533 690 273 94 91 chr2 122939456 122940006 -130316577 - MLT1K LTR MaLR -36 552 1 1933 128 4 0 chr2 122940719 122941026 -130315557 - AluSx SINE Alu 0 317 10 323 295 32 0 chr2 122942039 122942134 -130314449 + L3 LINE CR1 1477 1574 -3 3564 258 35 16 chr2 122943021 122943927 -130312656 + ERVL LTR ERVL 1138 2061 -3703 1497 208 8 64 chr2 122943927 122944302 -130312281 + MLT1A1 LTR MaLR 1 354 -11 11405 203 41 10 chr2 122944302 122946486 -130310097 + ERVL LTR ERVL 2062 4313 -1451 198 237 172 11 chr2 122946487 122946580 -130310003 + MIR SINE MIR 85 192 -70 936 241 39 13 chr2 122947014 122947246 -130309337 - MIR SINE MIR -24 238 1 440 231 170 0 chr2 122947964 122948111 -130308472 + MER5B DNA MER1_type 7 178 0 470 228 97 28 chr2 122949150 122949347 -130307236 - MIR SINE MIR -30 232 28 571 224 56 50 chr2 122950551 122950712 -130305871 - MIR3 SINE MIR -24 184 23 541 326 25 41 chr2 122952012 122952377 -130304206 + L1ME LINE L1 4472 4830 -1316 309 344 40 18 chr2 122952455 122952682 -130303901 + L1ME LINE L1 4932 5163 -983 327 326 66 41 chr2 122952756 122953195 -130303388 + L1ME LINE L1 5313 5762 -359 251 296 11 0 chr2 122953194 122953282 -130303301 + L1ME LINE L1 5925 6013 -344 * 231 323 0 0 chr2 122953373 122953438 -130303145 + (TA)n Simple_repeat Simple_repeat 1 65 0 198 0 0 0 chr2 122953829 122953851 -130302732 + (TTCA)n Simple_repeat Simple_repeat 1 22 0 1086 258 62 21 chr2 122954701 122955073 -130301510 + MER113 DNA MER1_type? 88 474 -47 236 337 40 0 chr2 122956535 122956636 -130299947 + L2 LINE L2 3208 3312 -1 23 0 0 0 chr2 122956964 122956987 -130299596 + AT_rich Low_complexity Low_complexity 1 23 0 819 265 130 56 chr2 122957183 122957813 -130298770 - L1MC4a LINE L1 -1876 5932 5256 968 213 133 9 chr2 122958205 122958416 -130298167 + Charlie1 DNA MER1_type 2 238 -2523 786 134 30 0 chr2 122958403 122958537 -130298046 + Charlie1 DNA MER1_type 2623 2760 -1 * 2191 106 0 0 chr2 122958570 122958854 -130297729 - AluSg SINE Alu -26 284 1 238 297 40 0 chr2 122959600 122959674 -130296909 - L3 LINE CR1 -117 1460 1384 1433 221 164 11 chr2 122959829 122960263 -130296320 - MLT1D LTR MaLR -1 504 5 502 231 55 50 chr2 122960353 122960552 -130296031 + Charlie8 DNA MER1_type 103 1400 -1017 565 261 31 12 chr2 122960694 122960855 -130295728 - MIR3 SINE MIR -21 187 24 248 260 31 31 chr2 122961095 122961191 -130295392 + L2 LINE L2 3218 3313 0 355 272 87 51 chr2 122961379 122961574 -130295009 - MLT1J LTR MaLR 0 511 310 303 292 83 55 chr2 122961629 122962170 -130294413 - L1ME LINE L1 -4985 1085 530 2067 129 74 34 chr2 122962889 122963239 -130293344 + THE1B LTR MaLR 1 364 0 12004 88 1 14 chr2 122963239 122964840 -130291743 + THE1B-int LTR MaLR 1 1580 0 2282 114 50 34 chr2 122964840 122965198 -130291385 + THE1B LTR MaLR 1 364 0 597 328 40 17 chr2 122965306 122965608 -130290975 - MLT1J LTR MaLR -200 311 3 23 68 0 0 chr2 122965716 122965760 -130290823 + AT_rich Low_complexity Low_complexity 1 44 0 370 295 36 22 chr2 122966114 122966253 -130290330 + MIR SINE MIR 52 192 -70 195 100 0 0 chr2 122966699 122966729 -130289854 + (TG)n Simple_repeat Simple_repeat 1 30 0 183 42 0 0 chr2 122968533 122968557 -130288026 + (TTA)n Simple_repeat Simple_repeat 1 24 0 25 0 0 0 chr2 122972599 122972624 -130283959 + AT_rich Low_complexity Low_complexity 1 25 0 180 125 0 0 chr2 122972687 122972719 -130283864 + (TCC)n Simple_repeat Simple_repeat 3 34 0 203 156 0 0 chr2 122973531 122973563 -130283020 + GA-rich Low_complexity Low_complexity 5 36 0 412 383 11 6 chr2 122973641 122973816 -130282767 + MER91A DNA MER1_type 3 178 -18 1966 98 102 149 chr2 122975767 122976216 -130280367 + MSTA LTR MaLR 1 428 0 388 264 0 31 chr2 122976716 122976845 -130279738 - L2 LINE L2 0 3313 3189 419 337 21 16 chr2 122976935 122977128 -130279455 - L3 LINE CR1 -248 1329 1136 255 273 0 57 chr2 122978040 122978128 -130278455 + MIR SINE MIR 60 143 -65 3143 171 76 42 chr2 122978712 122979383 -130277200 - LTR8A LTR ERV1 0 727 34 1129 284 61 14 chr2 122979645 122980088 -130276495 + LTR16B LTR ERVL 1 464 0 417 300 17 33 chr2 122980713 122980836 -130275747 + L1MC4 LINE L1 6467 6588 -1454 3462 116 65 39 chr2 122980836 122981432 -130275151 + LTR9 LTR ERV1 1 612 0 417 300 17 33 chr2 122981432 122981488 -130275095 + L1MC4 LINE L1 6588 6643 -1399 231 88 0 0 chr2 122981496 122981530 -130275053 + (TG)n Simple_repeat Simple_repeat 2 35 0 1474 246 75 29 chr2 122981530 122981627 -130274956 + L1MC4 LINE L1 6758 6849 -1193 2251 68 0 0 chr2 122981627 122981906 -130274677 + AluY SINE Alu 1 279 -32 200 59 29 0 chr2 122981906 122981940 -130274643 + (CAAA)n Simple_repeat Simple_repeat 4 38 0 1474 246 75 29 chr2 122981940 122982560 -130274023 + L1MC4 LINE L1 6848 7708 -334 486 95 0 0 chr2 122982571 122982634 -130273949 + AluJ/FLAM SINE Alu 7 69 -243 364 319 15 0 chr2 122982952 122983087 -130273496 - MER117 DNA MER1_type -27 170 34 310 247 41 10 chr2 122983446 122983543 -130273040 - MER5A DNA MER1_type -80 109 10 788 166 38 6 chr2 122983570 122983727 -130272856 - MER5A DNA MER1_type -5 184 23 666 95 0 0 chr2 122983815 122983910 -130272673 + (GAAA)n Simple_repeat Simple_repeat 2 96 0 4528 92 0 84 chr2 122984060 122984784 -130271799 + MER4A LTR ERV1 2 664 0 299 317 55 18 chr2 122986460 122986624 -130269959 - MIR3 SINE MIR -27 181 12 202 242 141 50 chr2 122986881 122986980 -130269603 - MIR SINE MIR -81 127 20 1152 123 0 12 chr2 122987427 122987597 -130268986 + AluSg/x SINE Alu 145 312 0 503 269 42 30 chr2 122988119 122988295 -130268288 + MIR SINE MIR 9 183 -27 342 0 0 0 chr2 122988326 122988364 -130268219 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 588 315 60 51 chr2 122989634 122990164 -130266419 + MARNA DNA Mariner 43 577 -9 22 56 0 0 chr2 122990407 122990443 -130266140 + AT_rich Low_complexity Low_complexity 1 36 0 246 329 23 0 chr2 122991571 122991680 -130264903 - MIR SINE MIR -63 145 31 785 131 22 0 chr2 122992656 122992793 -130263790 + CT-rich Low_complexity Low_complexity 1 140 0 1486 128 5 0 chr2 122992793 122993004 -130263579 - AluSq SINE Alu -18 295 84 2123 121 14 0 chr2 122993030 122993327 -130263256 + AluSg SINE Alu 1 301 -9 214 304 54 0 chr2 122995803 122995895 -130260688 - L2 LINE L2 -252 3020 2924 236 282 45 64 chr2 122996753 122996955 -130259628 + MIR SINE MIR 9 206 -56 202 219 24 0 chr2 122997663 122997704 -130258879 + GA-rich Low_complexity Low_complexity 3 44 0 313 280 133 0 chr2 122997722 122997872 -130258711 - MIR SINE MIR -32 230 61 844 171 0 0 chr2 122998125 122998254 -130258329 - FLAM_C SINE Alu -14 129 1 354 294 128 11 chr2 122998541 122998728 -130257855 + L2 LINE L2 3097 3305 -8 271 230 170 0 chr2 122998764 122998864 -130257719 + L2 LINE L2 3197 3313 0 265 287 139 0 chr2 123000464 123000586 -130255997 + L2 LINE L2 3129 3267 -5 332 268 18 36 chr2 123000736 123000848 -130255735 + MIR SINE MIR 40 149 -113 222 328 26 35 chr2 123001260 123001376 -130255207 + MIR SINE MIR 6 120 -142 429 252 46 38 chr2 123001846 123001977 -130254606 + L2 LINE L2 3141 3272 0 201 156 0 0 chr2 123001979 123002011 -130254572 + (TGAA)n Simple_repeat Simple_repeat 4 35 0 342 305 70 27 chr2 123002037 123002528 -130254055 + L2 LINE L2 2674 3184 -88 347 287 70 0 chr2 123002964 123003093 -130253490 - L2 LINE L2 -245 3068 2931 306 0 0 0 chr2 123003165 123003199 -130253384 + (CA)n Simple_repeat Simple_repeat 2 35 0 1739 186 5 70 chr2 123003295 123003532 -130253051 - MLT1A1 LTR MaLR 0 365 164 2015 148 0 7 chr2 123003532 123003836 -130252747 - AluSx SINE Alu -9 303 2 1739 186 5 70 chr2 123003836 123003991 -130252592 - MLT1A1 LTR MaLR -201 164 1 311 281 11 0 chr2 123005098 123005187 -130251396 + L3b LINE CR1 1168 1257 -326 2339 111 3 0 chr2 123005442 123005748 -130250835 - AluSx SINE Alu -5 307 1 382 252 171 0 chr2 123006174 123006296 -130250287 - MER117 DNA MER1_type -48 149 7 298 43 22 22 chr2 123006296 123006342 -130250241 + MADE1 DNA Mariner 1 46 -34 424 289 63 31 chr2 123006531 123006818 -130249765 - L2 LINE L2 -12 3301 3006 651 275 56 61 chr2 123007076 123007224 -130249359 - L2 LINE L2 -580 2734 2587 2657 138 0 5 chr2 123007224 123007614 -130248969 + MLT1B LTR MaLR 3 390 0 651 275 56 61 chr2 123007614 123007807 -130248776 - L2 LINE L2 -727 2587 2395 286 281 90 30 chr2 123007972 123008139 -130248444 - L3 LINE CR1 -134 1443 1267 3439 143 6 17 chr2 123008537 123009006 -130247577 - MER1A DNA MER1_type -2173 527 63 2077 101 10 17 chr2 123009006 123009302 -130247281 - AluSq SINE Alu -17 296 3 3439 143 6 17 chr2 123009302 123009365 -130247218 - MER1A DNA MER1_type -2637 63 1 467 307 44 38 chr2 123009382 123009701 -130246882 + L1MEd LINE L1 538 858 -5261 23 54 0 0 chr2 123010419 123010456 -130246127 + AT_rich Low_complexity Low_complexity 1 37 0 251 289 0 58 chr2 123010456 123010560 -130246023 + L1ME LINE L1 5726 5823 -298 4434 198 55 27 chr2 123012905 123013956 -130242627 - Tigger6a DNA MER2_type 0 1083 3 31 0 0 0 chr2 123014184 123014215 -130242368 + AT_rich Low_complexity Low_complexity 1 31 0 197 269 23 115 chr2 123014331 123014461 -130242122 - L3 LINE CR1 -1107 470 353 254 339 165 0 chr2 123014841 123014956 -130241627 + MIR SINE MIR 58 191 -71 2006 176 45 8 chr2 123017051 123017427 -130239156 - MLT1B LTR MaLR 0 390 1 225 333 29 10 chr2 123017815 123017917 -130238666 + MIR SINE MIR 89 192 -70 671 220 65 0 chr2 123018009 123018195 -130238388 - L1MA8 LINE L1 -102 6189 5992 1254 248 97 29 chr2 123018660 123019043 -130237540 - MER77 LTR ERV1 -4 601 193 1060 176 106 29 chr2 123019171 123019304 -130237279 + L1MA8 LINE L1 5992 6113 -178 2205 105 10 7 chr2 123019304 123019600 -130236983 - AluSq SINE Alu -16 297 1 1060 176 106 29 chr2 123019600 123019739 -130236844 + L1MA8 LINE L1 6113 6285 -6 1796 147 13 61 chr2 123019868 123020181 -130236402 - AluJb SINE Alu -14 298 1 2646 199 75 75 chr2 123020450 123020745 -130235838 - MER21-int LTR ERV1 -55 4136 3842 198 71 0 0 chr2 123020745 123020773 -130235810 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 2646 199 75 75 chr2 123020773 123020786 -130235797 - MER21-int LTR ERV1 -349 3842 3830 720 155 0 17 chr2 123020786 123020902 -130235681 - FLAM_C SINE Alu -19 114 1 2646 199 75 75 chr2 123020902 123021365 -130235218 - MER21-int LTR ERV1 -360 3831 3364 2268 179 65 43 chr2 123021754 123022247 -130234336 + MLT1D LTR MaLR 1 504 -1 477 260 20 7 chr2 123023833 123023983 -130232600 + L2 LINE L2 2926 3077 -236 184 283 0 0 chr2 123023992 123024038 -130232545 + L2 LINE L2 3259 3304 -9 374 259 45 14 chr2 123024533 123024695 -130231888 + LTR43 LTR ERV1 183 472 -207 213 313 10 31 chr2 123025246 123025342 -130231241 - L2 LINE L2 0 3313 3220 494 161 23 0 chr2 123025639 123025726 -130230857 + L1MD3 LINE L1 7883 7971 -24 244 170 64 0 chr2 123025903 123025950 -130230633 + Charlie7 DNA MER1_type 52 101 -2511 * 430 255 60 38 chr2 123025932 123026116 -130230467 + Charlie7 DNA MER1_type 2425 2612 0 299 370 17 17 chr2 123026845 123027018 -130229565 - MIR3 SINE MIR -13 195 23 195 345 82 9 chr2 123028023 123028133 -130228450 + MIR3 SINE MIR 43 160 -48 821 270 120 74 chr2 123029255 123029805 -130226778 + MLT1H1 LTR MaLR 2 550 -5 1002 228 21 4 chr2 123030340 123030578 -130226005 - L1ME1 LINE L1 -223 5943 5709 613 264 97 9 chr2 123031874 123032090 -130224493 + MIR SINE MIR 2 236 -26 372 192 26 0 chr2 123032855 123032933 -130223650 + MER116 DNA Mariner 1 80 0 190 315 41 14 chr2 123033057 123033130 -130223453 - MIR SINE MIR -102 160 86 693 281 10 10 chr2 123035398 123035594 -130220989 + MIR SINE MIR 56 251 -11 207 271 0 0 chr2 123036087 123036146 -130220437 + MIR SINE MIR 95 153 -109 302 248 139 0 chr2 123037384 123037513 -130219070 + L3 LINE CR1 1345 1491 -86 22 0 0 0 chr2 123037800 123037822 -130218761 + AT_rich Low_complexity Low_complexity 1 22 0 295 189 176 0 chr2 123038933 123039007 -130217576 + L2 LINE L2 3227 3313 0 2090 115 0 28 chr2 123040560 123040881 -130215702 + AluSx SINE Alu 1 312 0 199 214 0 0 chr2 123041036 123041078 -130215505 - MIR SINE MIR -106 156 115 180 179 0 0 chr2 123041667 123041706 -130214877 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 216 0 0 0 chr2 123042793 123042817 -130213766 + (A)n Simple_repeat Simple_repeat 1 24 0 683 210 14 14 chr2 123043469 123043607 -130212976 - MLT1C LTR MaLR 0 467 330 3357 113 11 0 chr2 123043628 123044089 -130212494 + Charlie3 DNA MER1_type 35 500 -2210 1947 87 20 0 chr2 123044083 123044335 -130212248 + Charlie3 DNA MER1_type 2242 2498 -212 * 503 143 20 51 chr2 123044332 123044430 -130212153 + Charlie3 DNA MER1_type 2612 2706 -4 * 845 214 107 36 chr2 123044404 123044685 -130211898 - MLT1C LTR MaLR -106 361 61 305 260 92 58 chr2 123045221 123045394 -130211189 - MLT1J LTR MaLR -45 466 288 1785 235 23 3 chr2 123045497 123046061 -130210522 - L1ME2 LINE L1 -179 5987 5220 1597 252 32 7 chr2 123046063 123046527 -130210056 - L1ME2 LINE L1 -1071 5075 4600 811 192 97 100 chr2 123046507 123046856 -130209727 + L1ME LINE L1 4600 4947 -1199 * 377 162 29 0 chr2 123046880 123046948 -130209635 + L1ME LINE L1 5330 5399 -767 853 194 56 11 chr2 123046948 123047128 -130209455 + MLT1B LTR MaLR 1 188 -186 1053 220 0 0 chr2 123047165 123047374 -130209209 + MLT1B LTR MaLR 182 390 0 787 159 40 13 chr2 123047376 123047527 -130209056 + L1ME LINE L1 5397 5551 -615 908 233 73 5 chr2 123047669 123047875 -130208708 - MER58A DNA MER1_type -4 220 1 396 222 46 9 chr2 123047875 123047983 -130208600 + L1MA10 LINE L1 6213 6324 -10 213 65 0 0 chr2 123047984 123048015 -130208568 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 1895 149 4 0 chr2 123048017 123048293 -130208290 - AluSx SINE Alu -30 282 6 2338 85 7 0 chr2 123048323 123048616 -130207967 - AluY SINE Alu -15 296 2 236 333 89 0 chr2 123048968 123049058 -130207525 + MLT1I LTR MaLR 283 380 -29 348 312 63 113 chr2 123049147 123049509 -130207074 - L2 LINE L2 -19 3253 2910 2226 98 14 7 chr2 123050315 123050612 -130205971 + AluSx SINE Alu 1 299 -13 228 35 0 0 chr2 123050967 123050996 -130205587 + (TG)n Simple_repeat Simple_repeat 2 30 0 217 167 78 0 chr2 123050998 123051100 -130205483 + (TA)n Simple_repeat Simple_repeat 1 110 0 1707 127 8 0 chr2 123051450 123051710 -130204873 + Tigger5 DNA MER2_type 2062 2323 0 267 281 37 0 chr2 123052701 123052783 -130203800 - MIR3 SINE MIR -39 169 85 289 0 0 47 chr2 123052983 123053026 -130203557 + (CCCCG)n Simple_repeat Simple_repeat 4 44 0 279 54 0 0 chr2 123053406 123053443 -130203140 + (TC)n Simple_repeat Simple_repeat 1 37 0 510 360 62 30 chr2 123053812 123054148 -130202435 + L2 LINE L2 2910 3256 -16 364 271 34 62 chr2 123054487 123054685 -130201898 + MIR SINE MIR 11 194 -66 596 296 56 0 chr2 123055761 123055957 -130200626 + MIR SINE MIR 16 222 -40 190 316 0 0 chr2 123056176 123056233 -130200350 + MER5A DNA MER1_type 9 65 -124 5927 74 11 0 chr2 123056438 123057196 -130199387 - L1PA8A LINE L1 0 6131 5366 4876 100 3 4 chr2 123057195 123057906 -130198677 + L1PA8A LINE L1 4648 5357 -789 * 3401 160 52 17 chr2 123058279 123058907 -130197676 + MER51A LTR ERV1 1 640 0 191 260 60 0 chr2 123058922 123058972 -130197611 + MER5A DNA MER1_type 90 142 -47 523 287 153 5 chr2 123059068 123059277 -130197306 + MIR SINE MIR 20 259 -3 574 136 28 193 chr2 123059526 123059739 -130196844 - MER5B DNA MER1_type 0 178 1 258 294 120 22 chr2 123060736 123060920 -130195663 + MLT1L LTR MaLR 4 205 -410 1653 179 0 49 chr2 123061122 123061429 -130195154 + AluJo SINE Alu 1 292 -20 2098 237 118 6 chr2 123061760 123062270 -130194313 - MLT1F1 LTR MaLR 0 567 1 305 253 39 151 chr2 123062274 123062559 -130194024 + L2 LINE L2 3001 3253 -19 193 315 0 14 chr2 123062577 123062650 -130193933 + MIR SINE MIR 61 132 -76 2230 168 62 33 chr2 123062654 123063076 -130193507 - Tigger2a DNA MER2_type 0 434 1 546 279 177 29 chr2 123063176 123063589 -130192994 - MLT1H LTR MaLR 0 549 76 397 236 50 62 chr2 123063648 123063809 -130192774 + MER103 DNA DNA 8 166 0 424 220 61 23 chr2 123064665 123064797 -130191786 - L1ME4a LINE L1 -30 6091 5955 1370 178 23 23 chr2 123064846 123065105 -130191478 + Tigger7 DNA MER2_type 2232 2490 -1 315 0 0 0 chr2 123065109 123065144 -130191439 + (CA)n Simple_repeat Simple_repeat 2 36 0 439 330 85 10 chr2 123065289 123065595 -130190988 - L1ME4a LINE L1 -414 5707 5379 1622 169 27 20 chr2 123065638 123065807 -130190776 - AluJo SINE Alu -15 297 124 263 49 24 0 chr2 123065807 123065848 -130190735 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 1622 169 27 20 chr2 123065848 123065973 -130190610 - AluJo SINE Alu -188 124 1 1493 157 58 29 chr2 123065992 123066266 -130190317 - AluJo SINE Alu -9 303 22 320 333 37 0 chr2 123066838 123067027 -130189556 - L1ME4a LINE L1 -1813 4333 4138 310 371 24 14 chr2 123067031 123067241 -130189342 - L1ME4a LINE L1 -2044 4102 3891 25 75 0 0 chr2 123068175 123068228 -130188355 + AT_rich Low_complexity Low_complexity 1 53 0 310 284 21 7 chr2 123068716 123068857 -130187726 - L1ME4a LINE L1 -3732 2414 2272 23 86 0 0 chr2 123069042 123069100 -130187483 + AT_rich Low_complexity Low_complexity 1 58 0 476 149 0 0 chr2 123069159 123069226 -130187357 + Tigger5 DNA MER2_type 2 68 -2255 395 195 26 0 chr2 123069336 123069413 -130187170 - Tigger5 DNA MER2_type -3 2320 2242 674 287 110 56 chr2 123069639 123070085 -130186498 - L2 LINE L2 0 3313 2844 3212 208 82 22 chr2 123070314 123071326 -130185257 + L1MB5 LINE L1 854 1917 -4729 878 169 89 0 chr2 123071324 123071549 -130185034 + L1MA8 LINE L1 6044 6288 -3 * 876 208 78 4 chr2 123071558 123071789 -130184794 + L1MB5 LINE L1 1912 2159 -4487 * 2914 243 49 8 chr2 123071780 123072705 -130183878 + L1MB5 LINE L1 3035 3997 -2647 4465 225 48 22 chr2 123072726 123072860 -130183723 + L1MB5 LINE L1 4220 4349 -2295 1376 201 36 59 chr2 123072860 123073163 -130183420 + AluJo SINE Alu 2 297 -5 4465 225 48 22 chr2 123073163 123074272 -130182311 + L1MB5 LINE L1 4349 5496 -1148 516 216 14 58 chr2 123074283 123074422 -130182161 + MER70B LTR ERVL 30 162 -416 300 208 14 42 chr2 123074470 123074542 -130182041 + MER70B LTR ERVL 149 218 -360 4056 185 47 48 chr2 123074547 123075697 -130180886 + L1MB5 LINE L1 5517 6654 -18 1802 191 104 36 chr2 123075697 123076141 -130180442 - MLT1D LTR MaLR -31 474 1 232 322 8 16 chr2 123076330 123076451 -130180132 - HAL1b LINE L1 -841 507 388 216 301 116 29 chr2 123076652 123076825 -130179758 - L2 LINE L2 -68 3245 3058 809 258 44 22 chr2 123077051 123077280 -130179303 - MIR SINE MIR -21 241 8 334 306 19 9 chr2 123078382 123078490 -130178093 - L2 LINE L2 -1 3271 3163 608 282 33 6 chr2 123078620 123078801 -130177782 + MIR3 SINE MIR 21 206 -2 251 327 49 49 chr2 123079380 123079585 -130176998 + L2 LINE L2 2925 3129 -143 198 143 48 0 chr2 123079603 123079666 -130176917 + (TA)n Simple_repeat Simple_repeat 2 67 0 1363 189 38 35 chr2 123080234 123080552 -130176031 + MER33 DNA MER1_type 4 322 -2 234 241 17 0 chr2 123080893 123080951 -130175632 - Charlie8 DNA MER1_type -999 1418 1360 * 1385 239 38 109 chr2 123080949 123081501 -130175082 - Charlie8 DNA MER1_type -1900 517 5 203 200 0 0 chr2 123081539 123081574 -130175009 + A-rich Low_complexity Low_complexity 1 35 0 277 220 180 20 chr2 123081625 123081725 -130174858 - MIR SINE MIR -70 192 77 340 312 0 32 chr2 123082666 123082791 -130173792 - MIR SINE MIR -50 212 92 482 267 89 69 chr2 123082880 123083124 -130173459 - L1ME4a LINE L1 0 6121 5862 1694 175 7 17 chr2 123083124 123083421 -130173162 - AluSx SINE Alu -18 294 1 482 267 89 69 chr2 123083421 123083626 -130172957 - L1ME4a LINE L1 -259 5862 5663 214 103 0 0 chr2 123083909 123083938 -130172645 + MIR SINE MIR 223 251 -11 279 340 31 19 chr2 123084737 123084899 -130171684 - MIR SINE MIR -56 206 43 347 286 10 10 chr2 123085890 123085988 -130170595 + MIR3 SINE MIR 88 185 -23 320 396 0 0 chr2 123087148 123087254 -130169329 - MIR SINE MIR -62 146 41 436 283 71 0 chr2 123087589 123087702 -130168881 + MIR SINE MIR 47 167 -95 410 231 154 0 chr2 123087891 123087995 -130168588 - L2 LINE L2 0 3313 3194 249 33 0 0 chr2 123091283 123091313 -130165270 + (CTG)n Simple_repeat Simple_repeat 1 30 0 558 325 5 16 chr2 123092587 123092778 -130163805 - MIR3 SINE MIR 0 208 20 6166 74 21 7 chr2 123093855 123094680 -130161903 + L1PA13 LINE L1 5326 6161 -2 310 197 21 112 chr2 123095347 123095409 -130161174 - MIR3 SINE MIR -5 203 137 2318 179 70 11 chr2 123095409 123095850 -130160733 + MLT1C LTR MaLR 1 467 0 310 197 21 112 chr2 123095850 123095960 -130160623 - MIR3 SINE MIR -71 137 56 1752 187 3 10 chr2 123097261 123097561 -130159022 - AluJo SINE Alu -14 298 1 453 247 69 76 chr2 123100376 123100810 -130155773 + LTR33 LTR ERVL 8 519 -2 2124 110 0 3 chr2 123101299 123101623 -130154960 - AluSx SINE Alu 0 323 1 546 283 112 36 chr2 123101932 123102065 -130154518 + MLT1G LTR MaLR 1 123 -467 2263 125 0 0 chr2 123102065 123102368 -130154215 - AluSx SINE Alu -9 303 1 546 283 112 36 chr2 123102368 123102591 -130153992 + MLT1G LTR MaLR 123 384 -206 189 0 0 0 chr2 123102796 123102817 -130153766 + (CTG)n Simple_repeat Simple_repeat 3 23 0 185 185 0 26 chr2 123103001 123103045 -130153538 + MIR SINE MIR 77 120 -88 428 265 34 34 chr2 123103730 123103877 -130152706 - MIR SINE MIR -115 147 1 2384 72 0 19 chr2 123103976 123104283 -130152300 + AluY SINE Alu 1 301 -10 661 247 18 18 chr2 123104618 123104784 -130151799 + MIR SINE MIR 96 261 -1 282 254 158 45 chr2 123105788 123105965 -130150618 + MIR SINE MIR 8 204 -58 516 303 46 52 chr2 123107196 123107523 -130149060 - MER102b DNA MER1_type -16 325 1 188 274 88 29 chr2 123107847 123107949 -130148634 - MER5C DNA MER1_type -204 120 13 1720 130 0 0 chr2 123108061 123108300 -130148283 + AluJb SINE Alu 60 298 -14 276 127 18 18 chr2 123108308 123108363 -130148220 - MER5A DNA MER1_type -56 133 79 360 273 14 77 chr2 123108462 123108605 -130147978 + MER5A DNA MER1_type 11 144 -45 212 306 0 0 chr2 123108712 123108774 -130147809 + MIR3 SINE MIR 147 208 0 618 290 42 0 chr2 123108866 123109059 -130147524 + MIR SINE MIR 56 256 -6 439 196 0 49 chr2 123109722 123109824 -130146759 - MER103 DNA DNA -69 97 1 335 265 204 0 chr2 123109944 123110091 -130146492 + MIR SINE MIR 80 256 -6 309 281 66 25 chr2 123110202 123110323 -130146260 + L2 LINE L2 3146 3271 -1 200 200 18 0 chr2 123110324 123110379 -130146204 + GA-rich Low_complexity Low_complexity 1 56 0 441 156 0 0 chr2 123110430 123110507 -130146076 + GA-rich Low_complexity Low_complexity 1 77 0 284 227 76 0 chr2 123111019 123111085 -130145498 + MLT1K LTR MaLR 517 587 -1 305 224 0 12 chr2 123111101 123111186 -130145397 + (TG)n Simple_repeat Simple_repeat 1 84 0 185 299 75 0 chr2 123111183 123111250 -130145333 - L2 LINE L2 -75 3197 3126 * 508 343 88 29 chr2 123111327 123111919 -130144664 - L2 LINE L2 -340 2974 2348 309 26 0 0 chr2 123112036 123112074 -130144509 + (CA)n Simple_repeat Simple_repeat 2 39 0 2518 143 24 17 chr2 123113832 123114294 -130142289 - L1MB7 LINE L1 -19 6165 5701 2161 94 0 0 chr2 123114305 123114605 -130141978 - AluSc SINE Alu 0 316 17 274 374 0 19 chr2 123114869 123114976 -130141607 + MIR SINE MIR 34 138 -70 229 170 43 0 chr2 123115090 123115137 -130141446 + (CATA)n Simple_repeat Simple_repeat 2 50 0 1638 202 0 10 chr2 123115204 123115490 -130141093 + AluJb SINE Alu 4 288 -24 941 100 47 0 chr2 123115490 123115660 -130140923 + GA-rich Low_complexity Low_complexity 3 180 0 1638 202 0 10 chr2 123115660 123115680 -130140903 + AluJb SINE Alu 288 307 -5 721 140 5 38 chr2 123115700 123115886 -130140697 + GA-rich Low_complexity Low_complexity 1 180 0 618 173 7 13 chr2 123115986 123116136 -130140447 + GA-rich Low_complexity Low_complexity 3 151 0 1094 93 6 16 chr2 123116146 123116328 -130140255 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 708 89 0 0 chr2 123116329 123116430 -130140153 + (GGAA)n Simple_repeat Simple_repeat 1 101 0 271 320 48 16 chr2 123117438 123117563 -130139020 - MIR SINE MIR -25 237 109 203 189 189 0 chr2 123117668 123117721 -130138862 + L2 LINE L2 3251 3313 0 1802 274 93 11 chr2 123117754 123118546 -130138037 - L1ME4a LINE L1 -25 6096 5241 212 250 0 17 chr2 123119384 123119444 -130137139 - L2 LINE L2 -300 2972 2914 244 226 204 0 chr2 123120715 123120808 -130135775 - HAL1 LINE L1 -1012 1495 1384 367 129 52 17 chr2 123120812 123120928 -130135655 + (TG)n Simple_repeat Simple_repeat 1 120 0 1055 215 96 34 chr2 123120928 123121346 -130135237 - HAL1 LINE L1 -1144 1363 920 758 291 126 43 chr2 123121349 123121840 -130134743 - HAL1 LINE L1 -1625 882 351 7287 41 46 0 chr2 123121874 123122923 -130133660 - L1PA5 LINE L1 -12 6142 5083 9622 40 0 0 chr2 123122923 123124065 -130132518 + L1PA5 LINE L1 3956 5097 -1049 467 257 67 109 chr2 123124079 123124410 -130132173 - HAL1 LINE L1 -2180 327 11 635 216 0 9 chr2 123124528 123124644 -130131939 - FLAM_C SINE Alu -24 119 5 318 26 0 0 chr2 123125334 123125373 -130131210 + (CA)n Simple_repeat Simple_repeat 2 40 0 502 241 10 6 chr2 123126195 123126310 -130130273 - MIR SINE MIR -76 132 22 2643 149 26 0 chr2 123126542 123126959 -130129624 - MSTA LTR MaLR 0 428 1 540 227 22 18 chr2 123127144 123127296 -130129287 + MIR SINE MIR 25 170 -62 6113 114 9 1 chr2 123127981 123128912 -130127671 + L1PA15 LINE L1 5207 6144 -21 301 148 19 0 chr2 123128975 123129029 -130127554 - L2 LINE L2 0 3313 3259 882 241 18 9 chr2 123129430 123129650 -130126933 + MIR SINE MIR 30 251 -11 343 278 17 17 chr2 123129658 123129773 -130126810 - MLT1H1 LTR MaLR -1 554 440 * 1011 288 11 4 chr2 123129772 123130036 -130126547 - MLT1H1 LTR MaLR -280 275 10 2639 185 39 4 chr2 123130208 123130716 -130125867 - MER74A LTR ERVL -32 526 1 363 330 123 17 chr2 123131400 123131749 -130124834 + L2 LINE L2 2432 2817 -497 275 278 222 0 chr2 123132031 123132157 -130124426 + L2 LINE L2 3114 3267 -5 581 138 0 9 chr2 123132454 123132563 -130124020 + (GGGGA)n Simple_repeat Simple_repeat 5 112 0 322 332 50 30 chr2 123133294 123133496 -130123087 - MIR SINE MIR -6 256 51 712 273 71 16 chr2 123133809 123134117 -130122466 + HsTC2 DNA Tc2 49 373 -1525 533 321 56 8 chr2 123134317 123134585 -130121998 + MER102b DNA MER1_type 59 339 -2 860 203 18 79 chr2 123135049 123135276 -130121307 - MER20 DNA MER1_type -1 218 6 2224 214 91 63 chr2 123135394 123136030 -130120553 + MLT1E1 LTR MaLR 1 654 0 214 239 11 11 chr2 123136079 123136167 -130120416 + GA-rich Low_complexity Low_complexity 2 89 0 192 300 0 0 chr2 123136206 123136266 -130120317 - MIR SINE MIR -128 134 75 2501 57 7 0 chr2 123137629 123137928 -130118655 - AluY SINE Alu -10 301 1 216 67 0 0 chr2 123140322 123140352 -130116231 + (GA)n Simple_repeat Simple_repeat 1 30 0 324 70 0 0 chr2 123140751 123140794 -130115789 + (CA)n Simple_repeat Simple_repeat 2 44 0 397 286 59 62 chr2 123141801 123142177 -130114406 + MLT1K LTR MaLR 127 570 -18 491 264 120 24 chr2 123145001 123145206 -130111377 + MIR SINE MIR 34 256 -6 294 29 0 0 chr2 123145813 123145848 -130110735 + (TTG)n Simple_repeat Simple_repeat 2 36 0 200 222 0 0 chr2 123146221 123146257 -130110326 + (TGAA)n Simple_repeat Simple_repeat 2 37 0 222 118 0 0 chr2 123146760 123146794 -130109789 + (GA)n Simple_repeat Simple_repeat 2 35 0 225 330 93 0 chr2 123147179 123147276 -130109307 + MIR SINE MIR 36 141 -121 2081 203 66 33 chr2 123147384 123147868 -130108715 + MLT1D LTR MaLR 3 502 -3 1440 219 286 17 chr2 123148153 123148424 -130108159 + L1MC4 LINE L1 6550 6747 -1061 1871 177 64 3 chr2 123148424 123148768 -130107815 + MLT1A1 LTR MaLR 1 365 0 1440 219 286 17 chr2 123148768 123149400 -130107183 + L1MC4 LINE L1 6747 7563 -245 436 232 168 19 chr2 123149406 123149561 -130107022 - LTR16B LTR ERVL -286 178 1 201 289 0 0 chr2 123149684 123149736 -130106847 + (TA)n Simple_repeat Simple_repeat 1 52 0 384 361 6 24 chr2 123150097 123150266 -130106317 + L2 LINE L2 2593 2758 -556 417 373 48 56 chr2 123150460 123150873 -130105710 + L2 LINE L2 2850 3259 -13 388 220 121 64 chr2 123153536 123153709 -130102874 + MIR SINE MIR 46 228 -34 270 0 0 0 chr2 123153785 123153815 -130102768 + (CA)n Simple_repeat Simple_repeat 2 31 0 2143 203 49 69 chr2 123153842 123154477 -130102106 - MLT1E3 LTR MaLR 0 624 3 189 107 0 0 chr2 123154511 123154539 -130102044 + (GGAA)n Simple_repeat Simple_repeat 3 30 0 428 271 26 117 chr2 123154560 123155050 -130101533 + L1ME4a LINE L1 5585 6029 -92 1893 153 0 37 chr2 123155050 123155371 -130101212 - AluJo SINE Alu -3 309 1 428 271 26 117 chr2 123155371 123155385 -130101198 + L1ME4a LINE L1 6029 6043 -78 2125 123 17 20 chr2 123155398 123155441 -130101142 - L1MB3 LINE L1 0 6183 6141 2020 127 21 52 chr2 123155441 123155828 -130100755 - THE1C LTR MaLR 0 375 1 2125 123 17 20 chr2 123155828 123156142 -130100441 - L1MB3 LINE L1 -42 6141 5827 1317 163 105 23 chr2 123156151 123156408 -130100175 + AluJb SINE Alu 17 294 -18 3038 182 8 6 chr2 123156411 123157026 -130099557 - L1MB3 LINE L1 -393 5790 5175 192 246 53 18 chr2 123158137 123158194 -130098389 + MIR SINE MIR 70 128 -80 388 239 170 32 chr2 123158308 123158496 -130098087 + L2 LINE L2 3094 3307 -6 221 263 92 0 chr2 123158611 123158687 -130097896 + L2 LINE L2 3190 3272 0 379 280 80 0 chr2 123159304 123159454 -130097129 - MIR SINE MIR -52 210 49 874 295 92 25 chr2 123159683 123160131 -130096452 - L2 LINE L2 -3 3310 2833 241 254 15 0 chr2 123160145 123160212 -130096371 + Charlie4 DNA MER1_type 18 85 -1876 799 226 51 45 chr2 123160249 123160441 -130096142 + Charlie4 DNA MER1_type 1645 1841 -120 1331 214 106 18 chr2 123160441 123160782 -130095801 + MLT1A2 LTR MaLR 2 372 -2 799 226 51 45 chr2 123160782 123160903 -130095680 + Charlie4 DNA MER1_type 1841 1960 -1 604 311 58 9 chr2 123160906 123161131 -130095452 - L2 LINE L2 -505 2809 2574 438 199 76 53 chr2 123161852 123162023 -130094560 + MER58B DNA MER1_type 15 189 -152 630 269 0 0 chr2 123162029 123162163 -130094420 - FRAM SINE Alu -23 153 20 806 180 81 12 chr2 123162182 123162343 -130094240 + MER58B DNA MER1_type 170 341 0 366 206 0 0 chr2 123162348 123162411 -130094172 - MER91 DNA MER1_type -77 63 1 502 338 70 38 chr2 123162426 123162825 -130093758 + L2 LINE L2 2857 3268 -4 21 82 0 0 chr2 123162882 123162931 -130093652 + AT_rich Low_complexity Low_complexity 1 49 0 2079 100 0 0 chr2 123162999 123163269 -130093314 + AluSc SINE Alu 15 284 -25 611 281 224 14 chr2 123163442 123163794 -130092789 - MLT1K LTR MaLR -10 578 153 2619 95 3 11 chr2 123163892 123164259 -130092324 - THE1B LTR MaLR 0 364 1 10350 104 11 79 chr2 123164259 123165955 -130090628 - THE1B-int LTR MaLR 0 1580 1 2834 90 0 8 chr2 123165955 123166322 -130090261 - THE1B LTR MaLR 0 364 1 564 280 35 0 chr2 123167014 123167157 -130089426 + MIR SINE MIR 112 259 -3 21 0 0 0 chr2 123168500 123168521 -130088062 + AT_rich Low_complexity Low_complexity 1 21 0 231 208 0 0 chr2 123168676 123168729 -130087854 - MER116 DNA Mariner -27 53 1 453 288 92 28 chr2 123169409 123169735 -130086848 - L1ME4a LINE L1 -158 5963 5617 2320 205 42 13 chr2 123169811 123170353 -130086230 + MER74A LTR ERVL 1 558 0 533 314 82 0 chr2 123170803 123170997 -130085586 + MIR SINE MIR 2 211 -51 712 302 167 15 chr2 123170998 123171399 -130085184 - MLT1K LTR MaLR -2 586 125 1153 270 77 52 chr2 123171607 123172218 -130084365 + L1MC4a LINE L1 5549 6174 -1634 2242 109 0 3 chr2 123172384 123172696 -130083887 + AluSx SINE Alu 1 311 -1 210 311 92 48 chr2 123172731 123172959 -130083624 - L2 LINE L2 -217 3055 2818 311 295 27 54 chr2 123173868 123174017 -130082566 - L1ME4a LINE L1 -11 6110 5966 622 269 58 48 chr2 123174023 123174335 -130082248 - L1ME4a LINE L1 -197 5924 5610 204 40 0 0 chr2 123175578 123175603 -130080980 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 250 336 19 10 chr2 123176835 123176939 -130079644 - L2 LINE L2 -252 3020 2916 320 287 62 29 chr2 123177152 123177297 -130079286 + MIR SINE MIR 56 205 -3 339 261 0 0 chr2 123177994 123178063 -130078520 - MER81 DNA DNA -44 70 2 446 189 135 0 chr2 123178087 123178198 -130078385 + MIR SINE MIR 55 180 -82 202 182 0 0 chr2 123178197 123178230 -130078353 + L2 LINE L2 3263 3295 -18 * 636 249 35 12 chr2 123178505 123178678 -130077905 - LTR33 LTR ERVL -4 517 341 268 238 33 106 chr2 123178721 123178872 -130077711 - LTR33 LTR ERVL -381 140 1 594 273 64 6 chr2 123179075 123179247 -130077336 - MIR SINE MIR -4 258 77 7421 165 14 11 chr2 123179727 123181102 -130075481 + L1 LINE L1 3410 4789 -1357 3149 93 2 19 chr2 123181107 123181571 -130075012 + L1MA3 LINE L1 5841 6296 -9 2168 101 0 0 chr2 123181596 123181894 -130074689 + AluSc SINE Alu 1 298 -11 412 258 61 30 chr2 123182291 123182423 -130074160 - L3b LINE CR1 -204 1379 1244 250 183 0 127 chr2 123185162 123185233 -130071350 + Cheshire DNA MER1_type 825 886 -1534 328 292 157 6 chr2 123188949 123189127 -130067456 + L2 LINE L2 2584 2788 -526 1940 151 0 10 chr2 123189130 123189435 -130067148 + AluSx SINE Alu 1 302 -10 438 263 110 92 chr2 123189516 123189907 -130066676 + L2 LINE L2 2916 3313 0 429 203 16 16 chr2 123189963 123190086 -130066497 + GA-rich Low_complexity Low_complexity 3 125 0 228 182 212 15 chr2 123190280 123190346 -130066237 - L2 LINE L2 0 3313 3235 370 273 73 9 chr2 123190387 123190497 -130066086 + MIR3 SINE MIR 79 195 -13 21 36 0 0 chr2 123190510 123190538 -130066045 + AT_rich Low_complexity Low_complexity 1 28 0 270 328 17 26 chr2 123190834 123190950 -130065633 - MIR SINE MIR -96 166 52 549 279 144 0 chr2 123191398 123191613 -130064970 + MER102b DNA MER1_type 94 339 -2 380 229 149 11 chr2 123191945 123192096 -130064487 + MER5A DNA MER1_type 4 178 -11 277 246 139 33 chr2 123192644 123192766 -130063817 - L2 LINE L2 -2 3270 3136 1310 224 114 67 chr2 123192966 123193192 -130063391 + MLT1F1 LTR MaLR 2 216 -351 204 40 0 0 chr2 123193192 123193217 -130063366 + (CG)n Simple_repeat Simple_repeat 1 25 0 1310 224 114 67 chr2 123193217 123193514 -130063069 + MLT1F1 LTR MaLR 216 551 -16 1857 144 3 7 chr2 123193523 123193822 -130062761 + AluJo SINE Alu 1 298 -14 661 216 20 14 chr2 123193837 123193985 -130062598 - MIR SINE MIR -90 172 24 284 311 22 0 chr2 123194047 123194137 -130062446 + L2 LINE L2 3176 3267 -5 4977 152 36 47 chr2 123195337 123196302 -130060281 - L1MC2 LINE L1 0 6344 5390 221 274 44 71 chr2 123197125 123197238 -130059345 - MIR SINE MIR -57 205 96 282 197 127 0 chr2 123197439 123197510 -130059073 + MLT1C LTR MaLR 1 80 -387 2022 130 0 10 chr2 123197637 123197944 -130058639 - AluSg SINE Alu -6 304 1 2333 53 30 7 chr2 123197959 123198263 -130058320 - AluY SINE Alu 0 311 1 2511 45 0 3 chr2 123198360 123198672 -130057911 - AluY SINE Alu 0 311 1 2291 166 8 20 chr2 123198722 123199120 -130057463 + MLT1C LTR MaLR 63 455 -12 699 266 144 38 chr2 123199122 123199468 -130057115 - MLT1J1 LTR MaLR -6 440 58 1249 255 39 9 chr2 123200074 123200411 -130056172 + MLT1A1 LTR MaLR 19 365 0 509 273 23 0 chr2 123200816 123200948 -130055635 + L2 LINE L2 3175 3309 -4 261 280 91 38 chr2 123201003 123201135 -130055448 - L2 LINE L2 0 3272 3134 1633 156 0 33 chr2 123201273 123201575 -130055008 - AluJo SINE Alu -10 302 11 640 106 0 0 chr2 123201774 123201859 -130054724 + AluS SINE Alu 2 86 -226 582 329 120 38 chr2 123203258 123203675 -130052908 + L3b LINE CR1 1104 1554 -29 211 414 39 0 chr2 123204053 123204157 -130052426 + MIR SINE MIR 38 145 -63 312 281 144 14 chr2 123205019 123205158 -130051425 + MIR3 SINE MIR 4 160 -48 574 268 35 0 chr2 123205207 123205349 -130051234 + MER117 DNA MER1_type 51 197 0 381 270 0 119 chr2 123205728 123205887 -130050696 + MIR3 SINE MIR 37 176 -32 256 313 153 0 chr2 123206568 123206699 -130049884 - MIR SINE MIR -22 240 90 589 264 104 6 chr2 123208062 123208225 -130048358 - MIR SINE MIR -71 191 13 991 232 42 108 chr2 123208444 123208739 -130047844 - MLT1C LTR MaLR 0 467 154 2001 99 43 0 chr2 123208739 123209021 -130047562 - AluSc SINE Alu -15 294 1 991 232 42 108 chr2 123209021 123209181 -130047402 - MLT1C LTR MaLR -313 154 45 1719 109 98 0 chr2 123209181 123209447 -130047136 + AluSx SINE Alu 17 308 -4 991 232 42 108 chr2 123209447 123209490 -130047093 - MLT1C LTR MaLR -422 45 1 630 312 134 4 chr2 123209735 123209966 -130046617 + MIR SINE MIR 2 262 0 1576 217 67 12 chr2 123210612 123210958 -130045625 + MLT1A1 LTR MaLR 1 365 0 792 259 9 4 chr2 123210985 123211217 -130045366 - L1M4 LINE L1 -1333 4813 4581 234 231 15 62 chr2 123212198 123212263 -130044320 - MER5A DNA MER1_type 0 189 128 362 286 80 10 chr2 123212572 123212771 -130043812 - L2 LINE L2 -233 3039 2827 324 300 55 18 chr2 123213341 123213451 -130043132 - L2 LINE L2 -214 3058 2945 302 298 99 14 chr2 123214901 123215042 -130041541 - MIR3 SINE MIR -31 177 25 199 328 123 16 chr2 123215110 123215232 -130041351 - MIR SINE MIR 0 262 128 331 299 42 28 chr2 123215270 123215414 -130041169 - MIR SINE MIR -53 209 64 189 214 0 0 chr2 123215964 123216006 -130040577 + (CA)n Simple_repeat Simple_repeat 2 43 0 850 215 52 0 chr2 123216408 123216599 -130039984 + MER63A DNA MER1_type 4 204 -6 512 295 122 53 chr2 123216695 123217394 -130039189 + L2 LINE L2 2554 3313 0 295 191 0 29 chr2 123218092 123218160 -130038423 + Charlie7 DNA MER1_type 1479 1544 -1068 1753 186 130 90 chr2 123218169 123218411 -130038172 + Charlie7 DNA MER1_type 1658 1889 -723 2438 48 55 0 chr2 123218411 123218704 -130037879 + AluY SINE Alu 1 309 -2 1753 186 130 90 chr2 123218704 123219248 -130037335 + Charlie7 DNA MER1_type 1889 2475 -137 264 241 60 30 chr2 123219290 123219423 -130037160 + Charlie7 DNA MER1_type 2415 2551 -61 196 276 40 66 chr2 123220482 123220558 -130036025 + MIR SINE MIR 33 106 -102 243 410 0 17 chr2 123221055 123221172 -130035411 + MIR3 SINE MIR 78 192 -16 182 341 0 0 chr2 123221382 123221426 -130035157 - L2 LINE L2 -16 3256 3213 553 186 138 135 chr2 123221580 123221891 -130034692 + MER102b DNA MER1_type 1 312 -29 200 261 0 72 chr2 123222137 123222206 -130034377 - MIR SINE MIR -61 147 84 283 314 59 0 chr2 123222855 123222957 -130033626 + MIR SINE MIR 76 183 -79 444 323 50 17 chr2 123226167 123226365 -130030218 - MIR SINE MIR -38 170 16 267 275 0 50 chr2 123226524 123226604 -130029979 - MIR3 SINE MIR -19 189 114 201 163 0 47 chr2 123228048 123228091 -130028492 + G-rich Low_complexity Low_complexity 2 42 0 1237 111 16 5 chr2 123229487 123229677 -130026906 - AluSx SINE Alu 0 312 121 202 111 44 22 chr2 123229677 123229722 -130026861 + T-rich Low_complexity Low_complexity 2 47 0 1165 60 0 0 chr2 123229722 123229855 -130026728 - AluSx SINE Alu -180 133 1 207 69 0 0 chr2 123229966 123229995 -130026588 + (TTTTTA)n Simple_repeat Simple_repeat 2 30 0 897 229 43 17 chr2 123230447 123230678 -130025905 - MIR SINE MIR 0 262 26 191 186 34 51 chr2 123231083 123231142 -130025441 - L2 LINE L2 -95 3218 3161 213 196 0 0 chr2 123231626 123231672 -130024911 + (TA)n Simple_repeat Simple_repeat 2 47 0 332 290 123 0 chr2 123231678 123231840 -130024743 - L1MC4a LINE L1 -1875 5933 5752 25 75 0 0 chr2 123231858 123231911 -130024672 + AT_rich Low_complexity Low_complexity 1 53 0 831 312 63 6 chr2 123232170 123232614 -130023969 - L1MC4a LINE L1 -743 5403 5174 469 277 138 0 chr2 123235324 123235483 -130021100 + MIR SINE MIR 76 256 -6 219 279 148 0 chr2 123235625 123235686 -130020897 - L2 LINE L2 -2 3270 3201 421 277 0 0 chr2 123236803 123236915 -130019668 - MIR SINE MIR -69 193 82 449 220 161 8 chr2 123236964 123237082 -130019501 + MIR3 SINE MIR 33 155 -53 192 246 66 132 chr2 123237395 123237562 -130019021 + L2 LINE L2 2936 3091 -181 198 333 51 79 chr2 123237645 123237822 -130018761 - MER5A DNA MER1_type 0 189 18 207 294 67 25 chr2 123238229 123238348 -130018235 - MIR3 SINE MIR -11 197 74 330 294 153 24 chr2 123239347 123239517 -130017066 + L2 LINE L2 3122 3313 0 403 236 54 14 chr2 123239741 123239887 -130016696 - MIR SINE MIR -62 146 1 222 37 0 0 chr2 123240066 123240093 -130016490 + (CA)n Simple_repeat Simple_repeat 2 28 0 939 97 105 0 chr2 123240637 123240761 -130015822 + AluSq/x SINE Alu 1 137 -175 595 316 47 26 chr2 123241122 123241356 -130015227 + MIR SINE MIR 24 262 0 193 218 35 92 chr2 123241904 123241991 -130014592 - MIR SINE MIR 0 262 181 220 325 13 0 chr2 123242255 123242332 -130014251 - MIR3 SINE MIR -50 158 81 1513 255 8 64 chr2 123243340 123243842 -130012741 - MARNA DNA Mariner -58 528 55 243 175 0 0 chr2 123244981 123245038 -130011545 + L1MD3 LINE L1 7939 7995 0 205 75 25 50 chr2 123245563 123245603 -130010980 + (CAAAAA)n Simple_repeat Simple_repeat 5 43 0 279 0 0 0 chr2 123246517 123246548 -130010035 + (TC)n Simple_repeat Simple_repeat 2 32 0 43 20 0 0 chr2 123247704 123247754 -130008829 + AT_rich Low_complexity Low_complexity 1 50 0 255 276 110 43 chr2 123256816 123256979 -129999604 + MIR SINE MIR 83 256 -6 229 365 10 0 chr2 123258334 123258430 -129998153 + (TG)n Simple_repeat Simple_repeat 2 98 0 187 133 0 0 chr2 123258558 123258588 -129997995 + MIR3 SINE MIR 162 191 -17 240 100 0 0 chr2 123262693 123262733 -129993850 + (TAA)n Simple_repeat Simple_repeat 3 42 0 27 49 0 0 chr2 123263058 123263099 -129993484 + GC_rich Low_complexity Low_complexity 1 41 0 252 103 52 0 chr2 123266685 123266743 -129989840 + (CCG)n Simple_repeat Simple_repeat 1 61 0 230 295 11 11 chr2 123267267 123267362 -129989221 + (CCG)n Simple_repeat Simple_repeat 1 95 0 212 212 15 30 chr2 123267415 123267481 -129989102 + (CCCCG)n Simple_repeat Simple_repeat 3 67 0 210 222 0 0 chr2 123267723 123267777 -129988806 + A-rich Low_complexity Low_complexity 1 54 0 279 0 0 0 chr2 123267966 123267997 -129988586 + (T)n Simple_repeat Simple_repeat 1 31 0 27 0 0 0 chr2 123270265 123270292 -129986291 + GC_rich Low_complexity Low_complexity 1 27 0 345 62 0 0 chr2 123271712 123271760 -129984823 + (TG)n Simple_repeat Simple_repeat 1 48 0 233 278 46 28 chr2 123274845 123274953 -129981630 - MIR3 SINE MIR -17 191 82 413 247 96 14 chr2 123276369 123276515 -129980068 + MIR3 SINE MIR 34 191 -17 217 244 13 39 chr2 123278324 123278402 -129978181 + (CAGAGA)n Simple_repeat Simple_repeat 3 78 0 278 241 51 13 chr2 123278557 123278636 -129977947 - MIR SINE MIR -92 170 89 210 91 0 0 chr2 123280397 123280430 -129976153 + (T)n Simple_repeat Simple_repeat 1 33 0 395 243 164 14 chr2 123280990 123281130 -129975453 + MIR SINE MIR 77 237 -25 225 65 0 0 chr2 123282714 123282745 -129973838 + (CA)n Simple_repeat Simple_repeat 2 32 0 256 297 138 35 chr2 123282854 123282999 -129973584 - MIR3 SINE MIR -46 162 3 217 238 0 60 chr2 123283515 123283599 -129972984 + GA-rich Low_complexity Low_complexity 2 80 0 2417 90 0 13 chr2 123283606 123283917 -129972666 - AluSx SINE Alu -1 311 5 682 203 0 22 chr2 123285078 123285216 -129971367 + MER33 DNA MER1_type 15 149 -175 245 310 172 0 chr2 123285807 123285894 -129970689 + MIR3 SINE MIR 82 183 -25 251 232 0 0 chr2 123286150 123286206 -129970377 - MIR SINE MIR -57 205 150 375 194 0 0 chr2 123286420 123286487 -129970096 + AluS SINE Alu 1 67 -236 1962 148 0 49 chr2 123286548 123286872 -129969711 - AluJb SINE Alu -4 308 1 421 309 94 11 chr2 123286910 123287175 -129969408 - L1MC2 LINE L1 -211 5951 5665 488 180 85 8 chr2 123287183 123287340 -129969243 + L1MC2 LINE L1 5948 6053 -291 347 76 108 13 chr2 123287360 123287517 -129969066 + (TA)n Simple_repeat Simple_repeat 1 172 0 236 143 54 36 chr2 123287544 123287712 -129968871 + (TATAA)n Simple_repeat Simple_repeat 5 175 0 262 101 127 0 chr2 123287827 123287985 -129968598 + (TA)n Simple_repeat Simple_repeat 2 179 0 * 418 132 69 0 chr2 123287980 123288139 -129968444 + (TTATA)n Simple_repeat Simple_repeat 5 174 0 306 225 80 65 chr2 123288149 123288287 -129968296 + L1MCa LINE L1 1941 2080 -4346 26 0 0 0 chr2 123288287 123288313 -129968270 + AT_rich Low_complexity Low_complexity 1 26 0 411 56 124 6 chr2 123288320 123288481 -129968102 + (TA)n Simple_repeat Simple_repeat 1 180 0 229 176 68 0 chr2 123288483 123288557 -129968026 + (TATAA)n Simple_repeat Simple_repeat 5 83 0 2721 172 111 20 chr2 123288562 123289195 -129967388 + L1MC3 LINE L1 7079 7768 -17 828 200 125 20 chr2 123289270 123289470 -129967113 - MER58A DNA MER1_type -3 221 1 943 265 48 45 chr2 123289665 123290106 -129966477 - L1ME3 LINE L1 -787 5359 4918 1690 253 35 24 chr2 123290840 123291390 -129965193 - L1ME3 LINE L1 0 6162 5607 660 231 74 9 chr2 123291429 123291645 -129964938 - L1ME1 LINE L1 -5 6161 5932 607 335 96 22 chr2 123291657 123292155 -129964428 + L2 LINE L2 2221 2755 -559 221 305 34 0 chr2 123292416 123292475 -129964108 + L2 LINE L2 3137 3197 -75 249 271 10 10 chr2 123292640 123292736 -129963847 + L1M4 LINE L1 5187 5282 -864 1017 32 0 0 chr2 123292747 123292872 -129963711 - L1PA4 LINE L1 -3 6152 6028 247 293 96 27 chr2 123292899 123293087 -129963496 - L1ME1 LINE L1 -316 5805 5605 258 338 0 15 chr2 123294125 123294193 -129962390 + MIR SINE MIR 18 84 -124 415 318 7 0 chr2 123295382 123295530 -129961053 + MER46C DNA MER2_type 189 337 -1 367 262 19 19 chr2 123296132 123296239 -129960344 + L2 LINE L2 3203 3309 -4 264 316 60 38 chr2 123296329 123296462 -129960121 - MIR SINE MIR -13 249 114 261 250 15 0 chr2 123297015 123297083 -129959500 + MLT1E1 LTR MaLR 9 77 -577 181 170 0 128 chr2 123297545 123297592 -129958991 - MIR SINE MIR -190 72 32 2290 219 18 31 chr2 123297663 123297917 -129958666 - L1ME2 LINE L1 -15 6149 5893 1447 204 77 12 chr2 123297917 123298240 -129958343 - MER2 DNA MER2_type 0 344 1 2290 219 18 31 chr2 123298240 123298593 -129957990 - L1ME2 LINE L1 -271 5893 5550 2139 149 0 0 chr2 123299666 123299974 -129956609 + AluSq SINE Alu 1 308 -5 241 295 63 0 chr2 123299996 123300091 -129956492 - MER91A DNA MER1_type -93 103 3 510 333 61 5 chr2 123300423 123300621 -129955962 + MIR SINE MIR 2 210 -52 1121 152 22 78 chr2 123301631 123301862 -129954721 + MER20 DNA MER1_type 2 219 0 219 147 0 0 chr2 123302666 123302700 -129953883 + MIR3 SINE MIR 123 156 -52 252 268 41 21 chr2 123302716 123302813 -129953770 + MER94 DNA DNA 2 100 -34 598 243 22 11 chr2 123303043 123303228 -129953355 + LTR41 LTR ERVL 1 187 -586 335 192 105 87 chr2 123303612 123303784 -129952799 + LTR41 LTR ERVL 584 758 -15 227 200 0 0 chr2 123304068 123304113 -129952470 + MIR SINE MIR 93 137 -71 687 182 25 0 chr2 123304113 123304234 -129952349 - LTR12 LTR ERV1 -236 478 355 255 250 0 0 chr2 123304234 123304302 -129952281 - LTR30 LTR ERV1 -102 620 553 1028 103 259 0 chr2 123304303 123304488 -129952095 - LTR12 LTR ERV1 -429 285 53 240 250 0 0 chr2 123304488 123304540 -129952043 - LTR30 LTR ERV1 -670 52 1 3736 113 2 0 chr2 123304540 123305078 -129951505 - HERV9 LTR ERV1 0 8399 7861 429 365 7 0 chr2 123305414 123305559 -129951024 - MIR3 SINE MIR -41 167 22 1308 172 23 5 chr2 123305889 123306104 -129950479 + MER20 DNA MER1_type 1 219 0 222 254 191 56 chr2 123306124 123306250 -129950333 - L3 LINE CR1 -2 1575 1433 1742 39 0 0 chr2 123306529 123306734 -129949849 - L1PA4 LINE L1 -2 6153 5949 437 272 65 43 chr2 123307326 123307510 -129949073 - MER5A DNA MER1_type 0 189 2 396 235 47 40 chr2 123307789 123307938 -129948645 + L1ME3A LINE L1 6021 6170 0 941 169 77 0 chr2 123307978 123308185 -129948398 + L1MA4 LINE L1 6075 6297 -3 244 227 15 30 chr2 123308283 123308349 -129948234 + (TATATG)n Simple_repeat Simple_repeat 2 66 0 304 224 0 45 chr2 123308821 123308888 -129947695 + L1MCa LINE L1 2001 2064 -4362 * 349 299 23 0 chr2 123308848 123308935 -129947648 - L1MC4 LINE L1 -1340 6702 6614 340 344 0 0 chr2 123308859 123308952 -129947631 + L1MC4 LINE L1 6614 6706 -1336 * 473 224 15 66 chr2 123308974 123309170 -129947413 + L1ME4a LINE L1 5935 6120 -1 340 294 29 52 chr2 123310377 123310724 -129945859 + HAL1b LINE L1 100 438 -910 346 354 121 18 chr2 123310734 123311065 -129945518 + HAL1b LINE L1 506 870 -478 1382 292 118 49 chr2 123311394 123312325 -129944258 + L1MCa LINE L1 2464 3458 -2968 2105 148 3 0 chr2 123312329 123312633 -129943950 - AluSx SINE Alu -7 305 1 2200 138 0 0 chr2 123312643 123312940 -129943643 - AluSx SINE Alu -15 297 1 339 254 135 70 chr2 123312950 123313135 -129943448 + L1MC5 LINE L1 7711 7907 -54 390 288 131 7 chr2 123313459 123313612 -129942971 + MIR3 SINE MIR 15 186 -22 1982 184 37 0 chr2 123314980 123315354 -129941229 - MLT1B LTR MaLR -2 388 1 345 19 56 0 chr2 123315423 123315477 -129941106 + (TA)n Simple_repeat Simple_repeat 1 57 0 1867 87 4 0 chr2 123315477 123315733 -129940850 - AluSc SINE Alu 0 303 47 43836 32 21 1 chr2 123315969 123322000 -129934583 - L1PA2 LINE L1 0 6155 1 241 246 18 0 chr2 123322224 123322281 -129934302 + CT-rich Low_complexity Low_complexity 4 61 0 1661 201 12 60 chr2 123322349 123322752 -129933831 + MLT1B LTR MaLR 1 384 -6 434 286 49 13 chr2 123323267 123323548 -129933035 + MLT1I LTR MaLR 82 409 0 * 1107 275 122 27 chr2 123323548 123323809 -129932774 - MLT1L LTR MaLR -7 608 373 252 0 0 0 chr2 123323809 123323837 -129932746 + (GA)n Simple_repeat Simple_repeat 2 29 0 1107 275 122 27 chr2 123323837 123324057 -129932526 - MLT1L LTR MaLR -242 373 81 188 280 80 10 chr2 123324355 123324455 -129932128 - MIR SINE MIR -70 138 32 193 267 17 0 chr2 123324884 123325000 -129931583 + (TG)n Simple_repeat Simple_repeat 1 118 0 232 211 58 0 chr2 123325487 123325539 -129931044 - MLT1I LTR MaLR -245 164 110 518 308 88 30 chr2 123325740 123326301 -129930282 - L2 LINE L2 -21 3292 2664 335 245 164 14 chr2 123326874 123327082 -129929501 - MLT1L LTR MaLR 0 615 273 1386 263 55 17 chr2 123327093 123327264 -129929319 - L2 LINE L2 0 3313 3150 2322 159 76 2 chr2 123327264 123327661 -129928922 + MSTB LTR MaLR 1 426 0 1386 263 55 17 chr2 123327661 123327965 -129928618 - L2 LINE L2 -163 3150 2820 212 279 35 23 chr2 123329870 123329956 -129926627 - L2 LINE L2 -5 3267 3181 629 163 7 64 chr2 123329966 123330107 -129926476 - LTR37B LTR ERV1 0 468 336 231 114 0 0 chr2 123330161 123330196 -129926387 + (GGAA)n Simple_repeat Simple_repeat 4 38 0 922 233 52 49 chr2 123330196 123330483 -129926100 - LTR37B LTR ERV1 -180 288 1 392 326 52 17 chr2 123330557 123330729 -129925854 + MIR3 SINE MIR 20 197 -11 673 254 122 54 chr2 123330970 123331324 -129925259 - MLT1I LTR MaLR -6 403 26 422 243 45 0 chr2 123332485 123332596 -129923987 + MIR SINE MIR 68 183 -79 1972 192 23 33 chr2 123332656 123332920 -129923663 - LTR39 LTR ERV1 0 783 518 635 13 25 0 chr2 123332920 123332999 -129923584 + (TTTC)n Simple_repeat Simple_repeat 2 82 0 2172 117 0 0 chr2 123333001 123333284 -129923299 - AluSx SINE Alu -29 283 1 1972 192 23 33 chr2 123333284 123333412 -129923171 - LTR39 LTR ERV1 -266 517 392 2073 181 15 52 chr2 123333449 123333946 -129922637 - LTR39 LTR ERV1 -388 395 1 471 186 0 106 chr2 123334372 123334485 -129922098 + MER94 DNA DNA 5 105 -29 414 303 119 54 chr2 123335832 123336218 -129920365 - L1ME4a LINE L1 -285 5836 5426 2338 98 0 13 chr2 123336351 123336658 -129919925 - AluSg1 SINE Alu -5 304 2 396 303 46 83 chr2 123336868 123337301 -129919282 - L1ME4a LINE L1 -1194 4952 4536 1555 217 0 10 chr2 123337389 123337693 -129918890 - AluJo SINE Alu -11 301 1 279 272 65 35 chr2 123337708 123337940 -129918643 - L1ME4a LINE L1 -1713 4433 4195 292 325 92 44 chr2 123338031 123338237 -129918346 + MLT1K LTR MaLR 21 236 -352 317 309 97 23 chr2 123338339 123338514 -129918069 + MLT1L LTR MaLR 428 615 0 1320 202 24 11 chr2 123338606 123338965 -129917618 + L1M4 LINE L1 4989 5355 -805 1793 244 74 13 chr2 123338970 123339568 -129917015 - L1M4 LINE L1 -1369 4777 4144 636 238 37 11 chr2 123339570 123339759 -129916824 - L1M4 LINE L1 -2078 4068 3875 1041 204 42 0 chr2 123339809 123340000 -129916583 + AluSx SINE Alu 1 199 -113 3423 199 41 21 chr2 123340017 123340876 -129915707 + L1ME1 LINE L1 5188 6161 -5 838 256 69 69 chr2 123340957 123341477 -129915106 + HAL1 LINE L1 1883 2402 -105 17463 119 28 12 chr2 123341551 123343502 -129913081 + Tigger4(Zombi) DNA MER2_type 1 2010 -721 3409 84 23 4 chr2 123343502 123343979 -129912604 + LTR19A LTR ERV1 1 486 0 17463 119 28 12 chr2 123343979 123344714 -129911869 + Tigger4(Zombi) DNA MER2_type 2010 2731 0 702 248 7 0 chr2 123344754 123344907 -129911676 + MIR SINE MIR 36 189 -73 1719 160 14 31 chr2 123344924 123345217 -129911366 - AluJo SINE Alu -24 288 1 25 0 0 0 chr2 123345386 123345411 -129911172 + AT_rich Low_complexity Low_complexity 1 25 0 299 251 159 15 chr2 123345464 123345726 -129910857 - L1MC4a LINE L1 -296 5825 5621 332 230 9 62 chr2 123346019 123346132 -129910451 + MIR SINE MIR 77 183 -79 221 182 55 18 chr2 123347180 123347235 -129909348 - L2 LINE L2 -92 3221 3165 398 223 27 87 chr2 123347631 123347815 -129908768 - LTR67 LTR ERVL -25 532 360 6281 28 0 0 chr2 123348188 123348910 -129907673 - L1PA4 LINE L1 0 6155 5434 660 135 24 16 chr2 123348936 123349062 -129907521 - MSTB LTR MaLR -269 157 31 314 138 0 15 chr2 123349672 123349737 -129906846 - L1MB4 LINE L1 0 6180 6117 672 204 23 0 chr2 123349746 123349878 -129906705 + MSTA LTR MaLR 210 344 -84 903 178 63 71 chr2 123350084 123350337 -129906246 + MLT1C LTR MaLR 169 419 -48 8098 181 93 89 chr2 123350379 123350858 -129905725 - L1M4 LINE L1 -3177 3205 2729 779 185 117 133 chr2 123350858 123351225 -129905358 - MLT1A1 LTR MaLR -4 361 1 8098 181 93 89 chr2 123351225 123351671 -129904912 - L1M4 LINE L1 -3653 2729 2286 2384 222 48 20 chr2 123351671 123352208 -129904375 + MLT2B3 LTR ERVL 1 552 -2 8098 181 93 89 chr2 123352208 123352226 -129904357 - L1M4 LINE L1 -4096 2286 2270 226 0 0 67 chr2 123352226 123352256 -129904327 - MSTB LTR MaLR -368 28 1 8098 181 93 89 chr2 123352256 123353010 -129903573 - L1M4 LINE L1 -4112 2270 1521 746 187 8 0 chr2 123353010 123353133 -129903450 - FLAM_A SINE Alu -9 124 1 8098 181 93 89 chr2 123353133 123354572 -129902011 - L1M4 LINE L1 -4861 1521 29 4626 255 124 22 chr2 123354583 123355200 -129901383 - L2 LINE L2 -599 2715 2162 2303 103 3 0 chr2 123355200 123355502 -129901081 - AluSp SINE Alu -10 303 1 4626 255 124 22 chr2 123355502 123356668 -129899915 - L2 LINE L2 -1152 2162 751 332 155 0 0 chr2 123356697 123356755 -129899828 + L2 LINE L2 3256 3313 0 859 245 56 59 chr2 123357382 123357774 -129898809 - PABL_B LTR ERV1 0 667 277 297 273 144 7 chr2 123358265 123358279 -129898304 - L1MA10 LINE L1 -3 6331 6318 1194 235 125 28 chr2 123358279 123358671 -129897912 - L1ME2 LINE L1 -9 6155 5726 233 274 21 53 chr2 123359568 123359663 -129896920 - MIR SINE MIR -60 202 111 684 160 115 13 chr2 123359724 123359880 -129896703 - MER96B DNA MER1_type? -238 179 8 263 272 0 12 chr2 123359909 123359990 -129896593 - MER116 DNA Mariner 0 80 1 287 284 57 11 chr2 123360379 123360467 -129896116 - MIR SINE MIR -86 122 31 483 264 103 37 chr2 123361380 123361622 -129894961 - MIR SINE MIR -1 261 4 542 215 65 45 chr2 123361826 123362002 -129894581 - MER5A DNA MER1_type -6 183 4 195 309 83 0 chr2 123363567 123363651 -129892932 - L2 LINE L2 -14 3258 3168 504 185 0 11 chr2 123364299 123364391 -129892192 + AluJo SINE Alu 44 134 -178 321 129 32 0 chr2 123365123 123365185 -129891398 - L1MA8 LINE L1 -11 6280 6217 2357 100 3 0 chr2 123365551 123365862 -129890721 - AluSx SINE Alu 0 312 1 3971 225 28 26 chr2 123366229 123367447 -129889136 - L1MD1 LINE L1 -11 6231 5005 1099 165 0 34 chr2 123367447 123367623 -129888960 - FAM SINE Alu -3 172 3 3971 225 28 26 chr2 123367623 123368234 -129888349 - L1MD1 LINE L1 -1237 5005 4397 3035 125 146 16 chr2 123368235 123368795 -129887788 - LTR10E LTR ERV1 0 633 1 225 0 0 0 chr2 123368952 123368977 -129887606 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2973 237 19 35 chr2 123368979 123369718 -129886865 - BaEV-int LTR ERV1 -758 5891 5165 8056 107 22 2 chr2 123369781 123370961 -129885622 - BaEV-int LTR ERV1 -3887 3009 1806 322 250 167 0 chr2 123370963 123371047 -129885536 + LTR8 LTR ERV1 156 253 -438 5238 105 17 78 chr2 123371049 123372181 -129884402 - LTR10E-int LTR ERV1 -3313 4472 712 527 234 65 93 chr2 123372245 123372648 -129883935 - LTR10E-int LTR ERV1 -5987 662 288 947 220 68 47 chr2 123372656 123372988 -129883595 - LTR10E-int LTR ERV1 -6330 319 3 3033 125 146 16 chr2 123372990 123373550 -129883033 - LTR10E LTR ERV1 0 633 1 410 250 48 0 chr2 123373550 123373695 -129882888 - L1MD1 LINE L1 -1746 4400 4250 14973 199 40 13 chr2 123373706 123377662 -129878921 + L1PB1 LINE L1 6 4354 -2547 189 0 0 0 chr2 123377662 123377683 -129878900 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 14973 199 40 13 chr2 123377683 123380302 -129876281 + L1PB1 LINE L1 4354 6901 0 1873 207 17 94 chr2 123380303 123380879 -129875704 - L1MD1 LINE L1 -1886 4260 3729 5682 73 38 1 chr2 123380885 123381628 -129874955 - L1PA10 LINE L1 -4 6164 5395 11979 72 6 4 chr2 123381742 123383348 -129873235 - L1PA10 LINE L1 -3187 2959 1350 10911 215 92 21 chr2 123383527 123389492 -129867091 + L1PB1 LINE L1 65 6507 -360 384 126 39 19 chr2 123389492 123389595 -129866988 + (TA)n Simple_repeat Simple_repeat 1 105 0 542 209 9 0 chr2 123389601 123389716 -129866867 - L1 LINE L1 -1797 4349 4234 2470 122 11 8 chr2 123389723 123390091 -129866492 + L1PB1 LINE L1 6499 6867 0 22 35 0 0 chr2 123390094 123390123 -129866460 + AT_rich Low_complexity Low_complexity 1 29 0 5307 209 33 17 chr2 123390123 123390593 -129865990 + L1MA9 LINE L1 4182 4643 -1669 396 0 0 0 chr2 123390593 123390637 -129865946 + (CA)n Simple_repeat Simple_repeat 2 45 0 5307 209 33 17 chr2 123390637 123391752 -129864831 + L1MA9 LINE L1 4643 5739 -573 285 29 0 0 chr2 123391752 123391786 -129864797 + (CA)n Simple_repeat Simple_repeat 2 35 0 5307 209 33 17 chr2 123391786 123391926 -129864657 + L1MA9 LINE L1 5739 5875 -437 222 37 0 0 chr2 123391926 123391953 -129864630 + (TA)n Simple_repeat Simple_repeat 2 28 0 * 279 0 0 0 chr2 123391952 123391983 -129864600 + (CA)n Simple_repeat Simple_repeat 2 32 0 5307 209 33 17 chr2 123391953 123392322 -129864261 + L1MA9 LINE L1 5875 6282 -30 1419 129 21 21 chr2 123392361 123392602 -129863981 + L1MA4 LINE L1 6039 6279 -21 26 30 0 0 chr2 123392605 123392638 -129863945 + AT_rich Low_complexity Low_complexity 1 33 0 207 105 26 0 chr2 123392897 123392935 -129863648 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2148 176 117 12 chr2 123392938 123393432 -129863151 + L1MD2 LINE L1 5812 6357 -2 1339 218 14 17 chr2 123393555 123393713 -129862870 - AluJo SINE Alu -24 288 130 471 95 0 0 chr2 123393713 123393787 -129862796 + (CGAA)n Simple_repeat Simple_repeat 3 76 0 1339 218 14 17 chr2 123393787 123393917 -129862666 - AluJo SINE Alu -182 130 1 185 155 14 42 chr2 123395366 123395437 -129861146 + (CATA)n Simple_repeat Simple_repeat 3 71 0 324 0 0 0 chr2 123396571 123396607 -129859976 + (TC)n Simple_repeat Simple_repeat 1 36 0 240 35 0 0 chr2 123396632 123396661 -129859922 + (TC)n Simple_repeat Simple_repeat 2 30 0 * 317 24 24 0 chr2 123396660 123396702 -129859881 + (TG)n Simple_repeat Simple_repeat 2 44 0 1567 234 101 118 chr2 123397116 123397711 -129858872 - L1MC4 LINE L1 -140 7902 7337 396 0 0 0 chr2 123397711 123397755 -129858828 + (TG)n Simple_repeat Simple_repeat 1 44 0 1567 234 101 118 chr2 123397755 123398349 -129858234 - L1MC4 LINE L1 -705 7337 6734 270 0 0 0 chr2 123398391 123398421 -129858162 + (CA)n Simple_repeat Simple_repeat 2 31 0 212 254 58 87 chr2 123398571 123398643 -129857940 - L2 LINE L2 -3 3269 3201 656 102 242 38 chr2 123398643 123398800 -129857783 - MER53 DNA DNA 0 189 1 212 254 58 87 chr2 123398800 123398865 -129857718 - L2 LINE L2 -71 3201 3136 192 285 49 73 chr2 123399058 123399181 -129857402 - L2 LINE L2 -430 2884 2765 229 244 98 24 chr2 123399186 123399309 -129857274 - Charlie7 DNA MER1_type 0 2612 2481 320 310 10 0 chr2 123399344 123399444 -129857139 - Charlie7 DNA MER1_type -2511 101 1 341 250 86 59 chr2 123399695 123399847 -129856736 + L2 LINE L2 2584 2739 -575 21039 38 6 3 chr2 123399949 123402856 -129853727 - L1P2 LINE L1 -404 5751 2840 7751 30 1 0 chr2 123402855 123403756 -129852827 - L1PA2 LINE L1 0 6155 5254 * 7580 53 17 1 chr2 123403762 123404754 -129851829 + L1P LINE L1 3151 4158 -1988 239 276 159 45 chr2 123404855 123405145 -129851438 + L2 LINE L2 2941 3263 -9 308 288 72 22 chr2 123405503 123405642 -129850941 - MIR3 SINE MIR -43 165 20 494 256 119 32 chr2 123405764 123405983 -129850600 + MIR SINE MIR 9 246 -16 197 330 76 62 chr2 123406797 123407021 -129849562 + L2 LINE L2 3038 3264 -8 347 237 303 0 chr2 123407327 123407479 -129849104 + MIR SINE MIR 47 244 -18 954 218 85 62 chr2 123407551 123407973 -129848610 + L2 LINE L2 1329 1760 -1554 300 217 181 7 chr2 123408153 123408291 -129848292 - L1ME4a LINE L1 -1 6120 5959 260 330 138 0 chr2 123408324 123408418 -129848165 - L2 LINE L2 -5 3267 3161 418 269 83 73 chr2 123408558 123408967 -129847616 - L2 LINE L2 -434 2880 2468 387 230 164 13 chr2 123409522 123409674 -129846909 + MLT1H LTR MaLR 32 206 -343 301 273 45 91 chr2 123409807 123409939 -129846644 + MLT1H LTR MaLR 424 549 0 347 281 111 37 chr2 123409975 123410230 -129846353 - L1ME4a LINE L1 -521 5600 5332 180 194 0 0 chr2 123410340 123410371 -129846212 - MIR SINE MIR -81 181 151 286 287 21 21 chr2 123410514 123410608 -129845975 + MIR SINE MIR 87 180 -82 378 285 60 0 chr2 123410823 123410953 -129845630 - MIR SINE MIR -63 145 12 252 258 50 17 chr2 123411250 123411370 -129845213 + LTR16B LTR ERVL 327 450 -14 644 319 12 48 chr2 123411519 123411770 -129844813 - MIR SINE MIR -19 243 2 311 103 17 17 chr2 123412205 123412263 -129844320 + MIR SINE MIR 34 91 -171 1279 257 102 16 chr2 123412284 123412735 -129843848 - MLT1H LTR MaLR -15 534 45 231 236 0 0 chr2 123412763 123412818 -129843765 + MIR SINE MIR 100 154 -108 2031 142 15 127 chr2 123412840 123413242 -129843341 + LTR18A LTR ERVL 1 357 0 21041 69 2 3 chr2 123413252 123415920 -129840663 + L1P LINE L1 7 2671 -3475 3011 211 36 54 chr2 123416035 123416408 -129840175 - L1MDb LINE L1 -4384 2022 1644 2172 134 0 0 chr2 123416408 123416706 -129839877 + AluSx SINE Alu 1 298 -14 3011 211 36 54 chr2 123416706 123417670 -129838913 - L1MDb LINE L1 -4762 1644 708 375 307 142 74 chr2 123418809 123419105 -129837478 - L2 LINE L2 0 3272 2957 252 222 83 9 chr2 123419256 123419364 -129837219 - L2 LINE L2 -564 2750 2635 357 320 218 5 chr2 123419737 123419943 -129836640 + MIR SINE MIR 2 251 -11 229 328 157 0 chr2 123420488 123420622 -129835961 + MIR SINE MIR 47 201 -61 227 239 113 0 chr2 123420623 123420694 -129835889 - L2 LINE L2 -4 3309 3231 454 287 29 52 chr2 123423783 123423957 -129832626 + MIR SINE MIR 24 193 -69 669 251 75 51 chr2 123424212 123424467 -129832116 + MIR SINE MIR 2 262 0 186 118 0 0 chr2 123424798 123424832 -129831751 + (TC)n Simple_repeat Simple_repeat 2 35 0 186 118 0 0 chr2 123424867 123424901 -129831682 + (TC)n Simple_repeat Simple_repeat 2 35 0 186 118 0 0 chr2 123425001 123425035 -129831548 + (TC)n Simple_repeat Simple_repeat 2 35 0 247 174 23 0 chr2 123425139 123425225 -129831358 + CT-rich Low_complexity Low_complexity 2 89 0 299 295 36 27 chr2 123425639 123425751 -129830832 - L2 LINE L2 -1 3312 3200 473 304 58 0 chr2 123425796 123425967 -129830616 - MIR SINE MIR -76 186 6 228 293 138 53 chr2 123426693 123426881 -129829702 + MIR SINE MIR 23 226 -36 219 276 0 0 chr2 123427513 123427600 -129828983 + (CA)n Simple_repeat Simple_repeat 1 87 0 486 284 18 20 chr2 123428462 123428616 -129827967 - MIR SINE MIR -62 146 10 927 226 149 55 chr2 123428663 123429025 -129827558 - MSTD LTR MaLR 0 396 1 285 109 0 0 chr2 123429112 123429158 -129827425 + (GA)n Simple_repeat Simple_repeat 1 46 0 214 272 74 12 chr2 123430196 123430277 -129826306 - MER5A DNA MER1_type -103 86 1 370 301 44 7 chr2 123430359 123430495 -129826088 + MIR SINE MIR 13 153 -109 23 33 0 0 chr2 123430499 123430529 -129826054 + AT_rich Low_complexity Low_complexity 1 30 0 249 139 0 0 chr2 123430631 123430674 -129825909 + (TAG)n Simple_repeat Simple_repeat 1 43 0 583 229 85 37 chr2 123430715 123430903 -129825680 + MIR SINE MIR 40 236 -26 457 363 44 27 chr2 123430912 123431278 -129825305 + L3 LINE CR1 1191 1562 -15 180 250 71 18 chr2 123436141 123436197 -129820386 - MIR SINE MIR -161 101 43 380 354 23 0 chr2 123437204 123437334 -129819249 - MIR SINE MIR -110 152 20 1243 161 9 31 chr2 123438410 123438633 -129817950 + AluJo SINE Alu 85 302 -10 1248 41 18 6 chr2 123438642 123438673 -129817910 + (GAAA)n Simple_repeat Simple_repeat 1 204 0 1248 41 18 6 chr2 123438673 123438844 -129817739 + (GAAA)n Simple_repeat Simple_repeat 1 173 0 249 330 29 10 chr2 123438945 123439048 -129817535 + MIR SINE MIR 33 137 -71 219 345 25 42 chr2 123439636 123439755 -129816828 - L2 LINE L2 -171 3101 2985 870 217 17 17 chr2 123439756 123439936 -129816647 + MER5A DNA MER1_type 1 180 -9 495 313 37 8 chr2 123440069 123440258 -129816325 + MIR SINE MIR 32 227 -35 189 222 93 37 chr2 123440231 123440339 -129816244 - L2 LINE L2 -372 2941 2828 * 484 313 166 5 chr2 123440986 123441203 -129815380 - MIR SINE MIR -9 253 2 240 291 27 74 chr2 123441218 123441366 -129815217 - L2 LINE L2 -202 3070 2930 673 207 24 53 chr2 123443354 123443523 -129813060 - FRAM SINE Alu -2 164 1 226 259 0 0 chr2 123444308 123444362 -129812221 - L3b LINE CR1 -216 1367 1314 416 191 25 32 chr2 123444761 123444918 -129811665 + CT-rich Low_complexity Low_complexity 2 157 0 325 200 0 0 chr2 123445546 123445606 -129810977 - MLT1K LTR MaLR -252 336 277 282 29 0 0 chr2 123446293 123446328 -129810255 + (CAA)n Simple_repeat Simple_repeat 2 36 0 533 221 70 19 chr2 123446974 123447132 -129809451 - MER88 LTR ERVL -123 341 176 289 225 38 0 chr2 123447302 123447382 -129809201 - MER88 LTR ERVL -303 161 79 2957 33 3 0 chr2 123447461 123447824 -129808759 - L1PA4 LINE L1 -20 6135 5772 2209 122 3 0 chr2 123448321 123448625 -129807958 + AluSq SINE Alu 1 305 -8 305 232 0 0 chr2 123448628 123448684 -129807899 - L1MC4 LINE L1 -1339 6703 6648 418 351 100 20 chr2 123448791 123449090 -129807493 + L3 LINE CR1 531 853 -724 254 282 0 35 chr2 123449130 123449215 -129807368 + L2 LINE L2 3198 3279 -34 219 262 49 0 chr2 123449358 123449419 -129807164 - MIR SINE MIR -81 181 118 197 293 78 43 chr2 123449743 123449859 -129806724 - MIR SINE MIR -62 146 27 5348 121 87 27 chr2 123450844 123451950 -129804633 - MER11A LTR ERVK 0 1266 1 612 228 34 17 chr2 123451950 123452211 -129804372 - MLT1G LTR MaLR -132 410 178 254 263 0 0 chr2 123453454 123453511 -129803072 + MIR3 SINE MIR 110 166 -42 1080 177 10 0 chr2 123454430 123454628 -129801955 + MER3 DNA MER1_type 10 209 0 2138 181 80 8 chr2 123454674 123455149 -129801434 + L1MB5 LINE L1 5658 6166 -8 236 157 39 0 chr2 123455244 123455295 -129801288 + CT-rich Low_complexity Low_complexity 3 55 0 318 302 43 9 chr2 123455299 123455415 -129801168 - L1M4 LINE L1 -2954 3192 3073 887 222 30 65 chr2 123455422 123455652 -129800931 - AluJb SINE Alu -4 308 87 617 305 33 9 chr2 123456545 123456758 -129799825 + MIR SINE MIR 20 237 -25 1440 83 0 0 chr2 123457007 123457199 -129799384 + L1PA6 LINE L1 5963 6154 0 1146 206 63 112 chr2 123457568 123457951 -129798632 + MLT1A1 LTR MaLR 2 365 0 349 309 0 0 chr2 123457973 123458054 -129798529 + MIR3 SINE MIR 121 201 -7 683 238 16 11 chr2 123458526 123458711 -129797872 - MER3 DNA MER1_type 0 209 24 213 330 68 11 chr2 123459037 123459125 -129797458 - MIR SINE MIR -14 248 156 200 294 0 15 chr2 123459167 123459235 -129797348 + MIR SINE MIR 189 255 -7 205 230 95 68 chr2 123459273 123459347 -129797236 - MIR3 SINE MIR -125 83 8 388 242 25 8 chr2 123459690 123459810 -129796773 + LTR67 LTR ERVL 432 553 -4 485 215 58 0 chr2 123459995 123460116 -129796467 + MLT1H LTR MaLR 20 147 -402 395 203 0 119 chr2 123460261 123460404 -129796179 + MLT1H LTR MaLR 424 549 0 446 307 47 33 chr2 123460452 123460664 -129795919 - MIR SINE MIR 0 262 48 1331 296 94 50 chr2 123460958 123462162 -129794421 + L2 LINE L2 2309 3272 0 378 259 44 37 chr2 123462361 123462496 -129794087 + L2 LINE L2 2838 2973 -340 471 329 45 18 chr2 123463349 123463571 -129793012 - L2 LINE L2 0 3272 3045 258 355 8 24 chr2 123463695 123463819 -129792764 - MIR SINE MIR -65 143 22 2234 104 3 0 chr2 123463987 123464276 -129792307 + AluSx SINE Alu 1 290 -22 407 311 60 13 chr2 123464304 123464455 -129792128 - MIR3 SINE MIR -49 159 2 333 0 0 0 chr2 123464463 123464500 -129792083 + (CA)n Simple_repeat Simple_repeat 2 38 0 22 35 0 0 chr2 123464843 123464872 -129791711 + AT_rich Low_complexity Low_complexity 1 29 0 1402 108 10 0 chr2 123464947 123465151 -129791432 - L1PA10 LINE L1 -3 6165 5960 21 36 0 0 chr2 123465293 123465321 -129791262 + AT_rich Low_complexity Low_complexity 1 28 0 603 292 117 21 chr2 123465600 123465973 -129790610 - L1ME LINE L1 -430 5740 5319 332 274 110 20 chr2 123466001 123466147 -129790436 - L1ME LINE L1 -874 5272 5114 634 19 19 39 chr2 123466288 123466391 -129790192 + (TAGA)n Simple_repeat Simple_repeat 2 102 0 387 325 42 24 chr2 123467183 123467395 -129789188 - L1MC4a LINE L1 -1910 5898 5683 1112 177 74 4 chr2 123467428 123467848 -129788735 + MLT1D LTR MaLR 1 505 0 337 238 0 48 chr2 123467854 123467938 -129788645 + L2 LINE L2 3228 3307 -6 696 292 53 34 chr2 123468036 123468387 -129788196 - L1MC4a LINE L1 -749 5397 5237 2291 103 0 10 chr2 123468778 123469089 -129787494 + AluSx SINE Alu 1 308 -4 31 0 0 0 chr2 123469089 123469120 -129787463 + AT_rich Low_complexity Low_complexity 1 31 0 408 282 57 0 chr2 123469129 123469253 -129787330 - MIR SINE MIR -66 196 66 465 276 79 13 chr2 123469295 123469447 -129787136 - MIR SINE MIR -81 181 20 194 259 200 0 chr2 123469488 123469573 -129787010 - MER5B DNA MER1_type -76 102 1 466 307 25 25 chr2 123471547 123471749 -129784834 - MIR SINE MIR -13 249 48 1518 215 0 7 chr2 123472608 123472731 -129783852 + AluJo SINE Alu 1 123 -189 180 0 0 0 chr2 123472731 123472751 -129783832 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1518 215 0 7 chr2 123472751 123472911 -129783672 + AluJo SINE Alu 123 282 -30 219 336 82 9 chr2 123474687 123474797 -129781786 + L2 LINE L2 3155 3272 0 477 247 19 32 chr2 123474967 123475121 -129781462 - MER5A DNA MER1_type -35 154 3 192 156 22 22 chr2 123476209 123476254 -129780329 + MIR SINE MIR 107 151 -111 330 225 29 18 chr2 123477080 123477354 -129779229 + (TA)n Simple_repeat Simple_repeat 1 277 0 397 315 68 27 chr2 123477366 123477512 -129779071 - MIR SINE MIR -97 165 14 205 316 32 42 chr2 123477532 123477627 -129778956 - L3 LINE CR1 -934 643 550 698 271 49 39 chr2 123479846 123480130 -129776453 + LTR16A LTR ERVL 164 450 0 353 339 51 4 chr2 123480201 123480458 -129776125 - L1M4 LINE L1 -2580 3566 3298 456 260 85 66 chr2 123481340 123481425 -129775158 + L1M4 LINE L1 2130 2212 -3934 1597 202 13 10 chr2 123481425 123481732 -129774851 + AluJo SINE Alu 1 308 -4 456 260 85 66 chr2 123481732 123482012 -129774571 + L1M4 LINE L1 2212 2502 -3644 4780 43 0 2 chr2 123482021 123482597 -129773986 - L1PA6 LINE L1 -1362 4784 4210 7136 62 2 0 chr2 123482597 123483980 -129772603 + L1PA6 LINE L1 4763 6153 -1 565 88 35 80 chr2 123483980 123484093 -129772490 + L1M4 LINE L1 716 823 -4505 3346 223 35 119 chr2 123484102 123485107 -129771476 + L1M4 LINE L1 984 1865 -4463 381 141 0 42 chr2 123485107 123485178 -129771405 - MER41B LTR ERV1 -88 547 480 3346 223 35 119 chr2 123485178 123485808 -129770775 + L1M4 LINE L1 1865 2547 -3781 * 4450 160 20 25 chr2 123485792 123486754 -129769829 + L1MA4 LINE L1 5128 6057 -243 3124 97 32 5 chr2 123486779 123487213 -129769370 + MLT2A2 LTR ERVL 1 446 -7 775 184 82 10 chr2 123487217 123487424 -129769159 + L1MA4 LINE L1 6068 6289 -11 2011 123 0 34 chr2 123487501 123487841 -129768742 - AluSx SINE Alu 0 330 1 356 323 67 14 chr2 123487932 123488214 -129768369 + L1M4 LINE L1 3811 4107 -2221 231 307 61 64 chr2 123488471 123488813 -129767770 + L1M4 LINE L1 4191 4531 -1797 7653 87 43 14 chr2 123489022 123489821 -129766762 - PABL_A-int LTR ERV1 -247 4768 3925 2144 91 3 7 chr2 123489821 123490108 -129766475 + AluY SINE Alu 16 301 -10 7653 87 43 14 chr2 123490108 123490444 -129766139 - PABL_A-int LTR ERV1 -1090 3925 3600 1474 43 61 4 chr2 123490544 123490791 -129765792 - MER11A LTR ERVK -911 355 1 16031 57 8 4 chr2 123490791 123492733 -129763850 - HERVK11 LTR ERVK 0 7953 6004 204 222 111 28 chr2 123492904 123492976 -129763607 + MIR SINE MIR 97 174 -88 202 271 0 0 chr2 123493290 123493349 -129763234 + MIR SINE MIR 87 139 -69 2849 149 65 34 chr2 123494021 123494585 -129761998 - LTR59 LTR ERV1 -6 591 10 1139 170 106 50 chr2 123494585 123494947 -129761636 + MSTB LTR MaLR 1 424 -2 3237 207 67 28 chr2 123494959 123495746 -129760837 - LTR59-int LTR ERV1 0 6758 5941 1991 123 3 25 chr2 123495746 123496087 -129760496 - MER4A LTR ERV1 0 664 273 2141 113 3 3 chr2 123496281 123496592 -129759991 - AluSx SINE Alu -1 311 1 1093 289 62 25 chr2 123496623 123497190 -129759393 - L1ME3 LINE L1 -222 5940 5353 321 263 90 58 chr2 123497434 123497590 -129758993 + MIR SINE MIR 81 241 -21 809 168 0 0 chr2 123497613 123497744 -129758839 + FLAM_C SINE Alu 2 132 -1 423 0 0 0 chr2 123498118 123498165 -129758418 + (TG)n Simple_repeat Simple_repeat 2 48 0 389 325 43 0 chr2 123498170 123498287 -129758296 + MIR SINE MIR 21 142 -120 23 0 0 0 chr2 123499329 123499352 -129757231 + AT_rich Low_complexity Low_complexity 1 23 0 262 247 27 0 chr2 123499709 123499782 -129756801 - L1ME2 LINE L1 -8 6156 6082 610 200 17 0 chr2 123499803 123499918 -129756665 - L1MC4 LINE L1 0 8042 7926 2522 143 76 2 chr2 123499921 123500342 -129756241 + LTR47A LTR ERVL 1 452 0 200 185 56 0 chr2 123500346 123500400 -129756183 + CT-rich Low_complexity Low_complexity 1 57 0 2140 121 41 49 chr2 123500400 123500787 -129755796 - MER34B LTR ERV1 -181 384 1 570 243 58 91 chr2 123501417 123501557 -129755026 - MIR SINE MIR -26 236 105 1683 147 3 55 chr2 123501557 123501880 -129754703 + AluJo SINE Alu 9 316 0 570 243 58 91 chr2 123501880 123501981 -129754602 - MIR SINE MIR -157 105 2 23 0 0 0 chr2 123502221 123502244 -129754339 + AT_rich Low_complexity Low_complexity 1 23 0 204 196 36 0 chr2 123502441 123502497 -129754086 + (TA)n Simple_repeat Simple_repeat 2 59 0 2072 126 17 0 chr2 123502514 123502807 -129753776 - AluSx SINE Alu -14 298 1 1294 218 55 15 chr2 123503059 123503646 -129752937 - L1MC3 LINE L1 -393 7392 6677 306 228 0 0 chr2 123503691 123503748 -129752835 - L1MC3 LINE L1 -1107 6678 6622 1474 92 10 10 chr2 123503850 123504046 -129752537 + MER1B DNA MER1_type 143 338 -1 2152 259 31 32 chr2 123504051 123504355 -129752228 + L1MD1 LINE L1 2615 2918 -3228 2056 132 20 0 chr2 123504355 123504659 -129751924 + AluSx SINE Alu 1 310 -2 2152 259 31 32 chr2 123504659 123505263 -129751320 + L1MD1 LINE L1 2918 3522 -2624 201 74 0 0 chr2 123505284 123505311 -129751272 + (GGAA)n Simple_repeat Simple_repeat 1 27 0 3307 214 23 54 chr2 123505318 123506276 -129750307 + L1MD1 LINE L1 3510 4437 -1709 12868 119 20 25 chr2 123506277 123506539 -129750044 + Tigger1 DNA MER2_type 386 648 -1770 2210 109 0 3 chr2 123506539 123506832 -129749751 + AluSx SINE Alu 11 302 -10 12868 119 20 25 chr2 123506832 123508433 -129748150 + Tigger1 DNA MER2_type 648 2241 -177 2340 96 13 0 chr2 123508433 123508735 -129747848 + AluSq SINE Alu 1 306 -7 12868 119 20 25 chr2 123508735 123508913 -129747670 + Tigger1 DNA MER2_type 2241 2418 0 1954 183 57 21 chr2 123508916 123509388 -129747195 + L1MD1 LINE L1 5687 6177 -65 711 190 141 0 chr2 123509445 123509626 -129746957 + MER44D DNA MER2_type 31 507 -102 1484 198 91 13 chr2 123509626 123509944 -129746639 - MER2 DNA MER2_type 0 345 3 357 122 281 24 chr2 123509946 123510028 -129746555 + MER44D DNA MER2_type 502 604 -1 496 161 0 0 chr2 123510133 123510214 -129746369 - AluJ/FRAM SINE Alu -17 295 215 2221 115 81 3 chr2 123510268 123510625 -129745958 + Tigger2 DNA MER2_type 2334 2718 0 2539 65 0 0 chr2 123511377 123511685 -129744898 + AluY SINE Alu 1 308 -3 1892 157 29 0 chr2 123511978 123512259 -129744324 + AluJb SINE Alu 1 289 -23 493 127 32 8 chr2 123512260 123512386 -129744197 + GA-rich Low_complexity Low_complexity 2 130 0 30 0 0 0 chr2 123512455 123512485 -129744098 + AT_rich Low_complexity Low_complexity 1 30 0 330 198 141 41 chr2 123512762 123512883 -129743700 - L2 LINE L2 -1 3312 3180 30 27 0 0 chr2 123512910 123512947 -129743636 + AT_rich Low_complexity Low_complexity 1 37 0 1486 168 22 56 chr2 123513031 123513352 -129743231 + AluJo SINE Alu 1 310 -2 265 273 49 63 chr2 123514076 123514219 -129742364 + L2 LINE L2 2726 2866 -448 352 258 21 0 chr2 123514400 123514497 -129742086 + L2 LINE L2 3197 3295 -18 188 161 0 0 chr2 123514499 123514530 -129742053 - L2 LINE L2 -3 3269 3239 574 179 15 133 chr2 123517843 123517893 -129738690 - MER3 DNA MER1_type -7 202 148 2278 116 0 0 chr2 123517893 123518185 -129738398 + AluSg SINE Alu 1 292 -18 574 179 15 133 chr2 123518185 123518329 -129738254 - MER3 DNA MER1_type -61 148 31 27 49 0 0 chr2 123518820 123518861 -129737722 + AT_rich Low_complexity Low_complexity 1 41 0 5288 51 169 82 chr2 123522142 123523010 -129733573 - MER11A LTR ERVK 0 1266 323 1629 83 8 38 chr2 123523110 123523350 -129733233 - AluSx SINE Alu -44 268 36 21 0 0 0 chr2 123523598 123523619 -129732964 + AT_rich Low_complexity Low_complexity 1 21 0 405 141 0 0 chr2 123523760 123523831 -129732752 + (CA)n Simple_repeat Simple_repeat 1 71 0 1096 92 118 0 chr2 123523964 123524117 -129732466 + AluSg/x SINE Alu 132 302 -8 279 277 29 53 chr2 123524728 123524934 -129731649 + L1ME4a LINE L1 4458 4658 -1488 333 283 78 30 chr2 123525225 123525391 -129731192 + L1ME4a LINE L1 4883 5056 -1090 525 300 104 43 chr2 123525478 123525825 -129730758 + L1ME4a LINE L1 5282 5649 -2159 490 207 25 130 chr2 123525836 123526095 -129730488 + L1MC5 LINE L1 6925 7153 -808 2371 70 23 0 chr2 123526095 123526394 -129730189 + AluY SINE Alu 1 306 -5 490 207 25 130 chr2 123526394 123526419 -129730164 + L1MC5 LINE L1 7153 7179 -782 * 4291 182 36 33 chr2 123526415 123527322 -129729261 + L1MD2 LINE L1 5449 6358 -1 881 216 200 31 chr2 123527470 123527895 -129728688 + L1MC5 LINE L1 7323 7819 -142 1623 150 15 80 chr2 123527905 123528064 -129728519 + AluJo SINE Alu 1 130 -182 771 162 26 7 chr2 123528064 123528218 -129728365 - L1MD2 LINE L1 -8 6351 6195 1623 150 15 80 chr2 123528218 123528385 -129728198 + AluJo SINE Alu 130 306 -6 566 318 19 55 chr2 123528498 123528719 -129727864 + L1ME4a LINE L1 5671 5898 -223 2292 106 3 0 chr2 123528719 123529020 -129727563 + AluSq SINE Alu 1 302 -11 1652 168 34 10 chr2 123529027 123529325 -129727258 + AluJb SINE Alu 1 305 -7 566 318 19 55 chr2 123529325 123529516 -129727067 + L1ME4a LINE L1 5904 6076 -45 695 180 47 0 chr2 123530248 123530376 -129726207 - AluJo SINE Alu -177 135 2 34 24 0 0 chr2 123530540 123530581 -129726002 + AT_rich Low_complexity Low_complexity 1 41 0 3137 198 23 30 chr2 123531310 123531783 -129724800 + MER82 DNA MER2_type 1 469 -184 2030 132 0 30 chr2 123531783 123532086 -129724497 + AluJb SINE Alu 1 294 -18 3137 198 23 30 chr2 123532086 123532270 -129724313 + MER82 DNA MER2_type 469 653 0 1022 230 55 57 chr2 123532678 123533082 -129723501 + MER57A LTR ERV1 1 403 0 2227 109 3 22 chr2 123533866 123534177 -129722406 - AluSx SINE Alu -7 305 1 1186 191 151 0 chr2 123534199 123534471 -129722112 + L1MA6 LINE L1 5983 6295 -5 2025 94 7 49 chr2 123534542 123534849 -129721734 + AluSx SINE Alu 1 294 -18 561 103 0 35 chr2 123535103 123535190 -129721393 - MER4-int LTR ERV1 -1859 4404 4321 * 1210 148 17 39 chr2 123535189 123535503 -129721080 - MER4-int LTR ERV1 -5797 801 355 2153 100 7 0 chr2 123535851 123536132 -129720451 - AluSg SINE Alu -27 283 1 232 267 124 29 chr2 123536470 123536575 -129720008 + MLT1I LTR MaLR 98 212 -197 252 250 152 37 chr2 123536625 123536789 -129719794 + MLT1H LTR MaLR 354 536 -13 385 233 171 71 chr2 123536954 123537015 -129719568 - MLT1J LTR MaLR -247 264 210 2024 206 56 16 chr2 123537015 123537501 -129719082 + MLT1D LTR MaLR 1 505 0 385 233 171 71 chr2 123537501 123537679 -129718904 - MLT1J LTR MaLR -300 211 1 347 319 131 8 chr2 123537679 123537899 -129718684 + MLT1K LTR MaLR 172 427 -161 1624 203 178 37 chr2 123537899 123538417 -129718166 - MLT1G1 LTR MaLR 0 595 5 1762 116 106 3 chr2 123539095 123539379 -129717204 + AluSp SINE Alu 1 313 0 240 219 27 14 chr2 123539652 123539725 -129716858 - L1ME4a LINE L1 -189 5932 5859 274 251 162 86 chr2 123539727 123539828 -129716755 - L1ME4a LINE L1 -307 5814 5722 2356 35 0 39 chr2 123539828 123540114 -129716469 - AluY SINE Alu -10 301 27 274 251 162 86 chr2 123540114 123540327 -129716256 - L1ME4a LINE L1 -399 5722 5476 189 121 0 0 chr2 123540457 123540490 -129716093 + (TC)n Simple_repeat Simple_repeat 2 34 0 883 117 7 35 chr2 123541225 123541370 -129715213 - FLAM_C SINE Alu -2 141 1 943 222 35 34 chr2 123541553 123541830 -129714753 - L1ME2 LINE L1 -18 6144 5867 5742 203 37 59 chr2 123541957 123542136 -129714447 + L1M4 LINE L1 3611 3792 -2354 1635 157 0 4 chr2 123542136 123542416 -129714167 + AluJb SINE Alu 36 314 0 3707 145 37 45 chr2 123542422 123543118 -129713465 - LTR8 LTR ERV1 0 691 1 5742 203 37 59 chr2 123543118 123544482 -129712101 + L1M4 LINE L1 3797 5128 -1018 444 19 0 0 chr2 123544482 123544535 -129712048 + (TG)n Simple_repeat Simple_repeat 2 54 0 952 113 0 0 chr2 123544536 123544660 -129711923 - FLAM_C SINE Alu -19 124 1 244 250 355 7 chr2 123544971 123545123 -129711460 + MIR SINE MIR 46 250 -12 2128 145 0 0 chr2 123545716 123546027 -129710556 - AluSx SINE Alu -1 311 1 230 290 229 30 chr2 123546036 123546167 -129710416 + L2 LINE L2 3115 3271 -1 1316 118 63 4 chr2 123546295 123546533 -129710050 + MER44D DNA MER2_type 8 529 -80 25 31 0 0 chr2 123546540 123546572 -129710011 + AT_rich Low_complexity Low_complexity 1 32 0 954 235 92 11 chr2 123546616 123546702 -129709881 - MLT1J2 LTR MaLR -156 294 216 2164 120 7 0 chr2 123546702 123547001 -129709582 - AluSx SINE Alu -11 301 1 954 235 92 11 chr2 123547001 123547186 -129709397 - MLT1J2 LTR MaLR -234 216 1 904 207 17 0 chr2 123547489 123547663 -129708920 + MER58A DNA MER1_type 37 213 -11 2334 100 10 6 chr2 123547754 123548065 -129708518 - AluSx SINE Alu 0 312 1 2218 84 39 0 chr2 123548072 123548357 -129708226 - AluSc SINE Alu -13 296 1 183 250 0 0 chr2 123548484 123548536 -129708047 + GA-rich Low_complexity Low_complexity 3 54 0 363 193 9 44 chr2 123548562 123548676 -129707907 - L1PB3 LINE L1 -2 6152 6043 241 280 73 56 chr2 123549074 123549306 -129707277 - L1MC4 LINE L1 -1039 7003 6768 1693 201 10 0 chr2 123549343 123549637 -129706946 - AluJo SINE Alu -15 297 1 194 126 69 35 chr2 123550344 123550431 -129706152 + (CAGGC)n Simple_repeat Simple_repeat 5 94 0 2039 130 9 32 chr2 123551101 123551417 -129705166 - AluSq SINE Alu -4 309 1 207 114 0 0 chr2 123551508 123551543 -129705040 + (CA)n Simple_repeat Simple_repeat 1 35 0 525 226 36 15 chr2 123552071 123552208 -129704375 - MIR SINE MIR -95 167 28 240 154 77 46 chr2 123552647 123552712 -129703871 + L1MC3 LINE L1 7309 7375 -410 * 441 233 164 35 chr2 123552680 123552912 -129703671 + L1MC5 LINE L1 7292 7553 -408 1717 122 97 0 chr2 123552940 123553187 -129703396 - AluSx SINE Alu -18 294 24 1316 221 71 7 chr2 123553187 123553468 -129703115 - MER21B LTR ERV1 -109 754 456 2346 100 0 3 chr2 123553481 123553782 -129702801 - AluSq SINE Alu -9 304 5 1741 214 33 32 chr2 123553787 123554200 -129702383 + LTR56 LTR ERV1 10 383 -54 2030 157 3 0 chr2 123554200 123554506 -129702077 - AluJb SINE Alu -5 307 1 1741 214 33 32 chr2 123554506 123554562 -129702021 + LTR56 LTR ERV1 383 437 0 1535 205 15 9 chr2 123554562 123554959 -129701624 - MER21B LTR ERV1 -401 462 9 1714 169 30 27 chr2 123554963 123555259 -129701324 + AluJo SINE Alu 1 297 -15 531 271 40 0 chr2 123555295 123555446 -129701137 - MIR SINE MIR -21 241 85 1023 174 22 0 chr2 123555500 123555684 -129700899 + MER5A DNA MER1_type 1 188 -1 1850 145 44 27 chr2 123556512 123556808 -129699775 - AluSx SINE Alu -10 302 2 301 250 14 0 chr2 123556829 123556901 -129699682 - L2 LINE L2 0 3272 3200 276 277 230 0 chr2 123557246 123557394 -129699189 - MIR SINE MIR -7 255 74 347 209 105 0 chr2 123558033 123558119 -129698464 - MER45 DNA AcHobo -945 95 1 415 230 63 48 chr2 123558629 123558755 -129697828 + MLT1G LTR MaLR 169 296 -294 248 305 29 6 chr2 123558889 123559034 -129697549 - MER69 DNA AcHobo -4 2522 31 1469 214 36 33 chr2 123559082 123559446 -129697137 - MLT1A1 LTR MaLR 0 365 1 1471 135 8 37 chr2 123560967 123561211 -129695372 + Tigger4(Zombi) DNA MER2_type 2495 2731 0 509 238 29 64 chr2 123561526 123561617 -129694966 + MIR SINE MIR 87 171 -91 2616 27 7 10 chr2 123561617 123561917 -129694666 + AluSc SINE Alu 1 299 -10 509 238 29 64 chr2 123561917 123561997 -129694586 + MIR SINE MIR 171 252 -10 10344 135 18 6 chr2 123562238 123564978 -129691605 - L1MA3 LINE L1 -1 6304 3531 2208 73 56 3 chr2 123565042 123565330 -129691253 - AluY SINE Alu -8 303 1 17081 125 29 13 chr2 123565331 123565847 -129690736 - Tigger4(Zombi) DNA MER2_type -7 2724 2218 1283 170 19 48 chr2 123565847 123566158 -129690425 - AluJo SINE Alu -10 302 1 17081 125 29 13 chr2 123566158 123566631 -129689952 - Tigger4(Zombi) DNA MER2_type -513 2218 1754 183 42 0 0 chr2 123566631 123566655 -129689928 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 17081 125 29 13 chr2 123566655 123568307 -129688276 - Tigger4(Zombi) DNA MER2_type -977 1754 41 967 153 6 25 chr2 123568309 123568466 -129688117 + FRAM SINE Alu 6 159 -17 432 145 0 0 chr2 123568479 123568541 -129688042 - Tigger4(Zombi) DNA MER2_type -2669 62 1 520 208 62 84 chr2 123568917 123569053 -129687530 - MER5B DNA MER1_type 0 178 45 1493 154 44 66 chr2 123569053 123569372 -129687211 + AluJo SINE Alu 1 312 0 520 208 62 84 chr2 123569372 123569413 -129687170 - MER5B DNA MER1_type -133 45 5 1178 205 40 24 chr2 123569815 123569976 -129686607 - AluJo SINE Alu -23 289 121 363 44 0 0 chr2 123569976 123570021 -129686562 + (CA)n Simple_repeat Simple_repeat 2 46 0 1178 205 40 24 chr2 123570021 123570108 -129686475 - AluJo SINE Alu -191 121 37 321 164 0 0 chr2 123570121 123570182 -129686401 + MER5B DNA MER1_type 116 176 -2 2694 198 93 26 chr2 123570258 123570585 -129685998 + LTR48 LTR ERV1 1 305 -482 2296 107 7 7 chr2 123570585 123570597 -129685986 - AluSp SINE Alu -1 312 301 288 0 0 0 chr2 123570597 123570629 -129685954 + (TG)n Simple_repeat Simple_repeat 1 32 0 2296 107 7 7 chr2 123570629 123570926 -129685657 - AluSp SINE Alu -11 302 3 2694 198 93 26 chr2 123570926 123571284 -129685299 + LTR48 LTR ERV1 305 732 -55 325 236 110 16 chr2 123571313 123571440 -129685143 - MER34 LTR ERV1 -4 538 400 1644 206 3 20 chr2 123571665 123571971 -129684612 + AluJo SINE Alu 3 303 -9 1518 190 31 57 chr2 123572030 123572418 -129684165 + MER34B LTR ERV1 10 374 -191 1974 177 32 42 chr2 123572418 123572455 -129684128 - MSTB1 LTR MaLR -2 430 394 2361 91 0 3 chr2 123572455 123572752 -129683831 + AluY SINE Alu 3 298 -13 1974 177 32 42 chr2 123572752 123573148 -129683435 - MSTB1 LTR MaLR -38 394 1 8465 181 42 8 chr2 123573148 123573487 -129683096 - MSTB1-int LTR MaLR 0 1651 1325 2075 117 91 45 chr2 123573487 123573905 -129682678 - LTR23 LTR ERV1 0 437 1 8465 181 42 8 chr2 123573905 123575159 -129681424 - MSTB1-int LTR MaLR -326 1325 3 2212 137 69 17 chr2 123575159 123575567 -129681016 - MSTB1 LTR MaLR -2 430 2 442 136 48 96 chr2 123575622 123575747 -129680836 + MER34B LTR ERV1 445 563 -2 375 239 91 126 chr2 123576451 123576714 -129679869 + MER112 DNA MER1_type 2 255 -5 403 274 59 11 chr2 123577775 123577961 -129678622 - MER102b DNA MER1_type -6 335 141 1759 243 125 10 chr2 123577962 123578539 -129678044 + LTR48B LTR ERV1 2 644 0 1038 172 0 17 chr2 123578606 123578780 -129677803 + AluJb SINE Alu 137 307 -5 235 211 200 21 chr2 123580497 123580592 -129675991 - MIR SINE MIR -59 203 92 255 284 121 33 chr2 123580641 123580856 -129675727 - L2 LINE L2 -49 3264 3031 250 263 61 30 chr2 123581198 123581297 -129675286 + L2 LINE L2 3212 3313 0 * 980 247 180 12 chr2 123581278 123581622 -129674961 - L2 LINE L2 0 3313 2912 712 207 50 11 chr2 123582060 123582254 -129674329 - LTR49 LTR ERV1 0 595 416 351 148 216 0 chr2 123582228 123582316 -129674267 - LTR29 LTR ERV1 -198 424 318 * 988 142 98 0 chr2 123582342 123582525 -129674058 - LTR29 LTR ERV1 -421 201 1 463 160 336 0 chr2 123583196 123583316 -129673267 + MER5A DNA MER1_type 1 162 -27 203 266 86 62 chr2 123583316 123583487 -129673096 + MIR SINE MIR 4 177 -31 2079 85 7 46 chr2 123583812 123584119 -129672464 + AluSx SINE Alu 1 295 -17 459 186 72 0 chr2 123586238 123586335 -129670248 + MIR SINE MIR 88 191 -71 218 324 0 0 chr2 123586375 123586443 -129670140 + CT-rich Low_complexity Low_complexity 4 71 0 378 261 112 31 chr2 123587877 123588038 -129668545 + L3 LINE CR1 1388 1561 -16 331 236 236 0 chr2 123588398 123588508 -129668075 + MIR SINE MIR 81 216 -46 1649 204 8 8 chr2 123588706 123589058 -129667525 + L1MB5 LINE L1 5823 6174 0 333 296 28 14 chr2 123589150 123589292 -129667291 - MIR3 SINE MIR -62 146 3 301 340 42 7 chr2 123590485 123590629 -129665954 - MIR SINE MIR -46 216 68 318 241 143 30 chr2 123592189 123592322 -129664261 - MIR SINE MIR -83 179 32 242 293 0 13 chr2 123592491 123592566 -129664017 - L2 LINE L2 -73 3199 3126 299 246 51 4 chr2 123593770 123593898 -129662685 - MIR SINE MIR -62 146 19 222 270 90 54 chr2 123594487 123594598 -129661985 + MIR SINE MIR 78 192 -70 233 260 41 0 chr2 123595247 123595320 -129661263 - L2 LINE L2 -243 3070 2995 223 321 66 19 chr2 123600572 123600678 -129655905 - MIR SINE MIR -63 145 35 278 186 81 137 chr2 123600700 123600824 -129655759 + MER5A DNA MER1_type 33 149 -40 251 256 256 7 chr2 123601413 123601550 -129655033 - MER102b DNA MER1_type -158 183 13 324 231 218 34 chr2 123602146 123602293 -129654290 + MER5B DNA MER1_type 5 178 0 255 294 47 0 chr2 123602392 123602477 -129654106 - MIR SINE MIR -71 191 103 742 244 74 51 chr2 123602680 123602991 -129653592 + L1ME4a LINE L1 5801 6118 -3 632 242 96 30 chr2 123602971 123603002 -129653581 + L1MC5 LINE L1 7596 7624 -337 * 2291 89 3 3 chr2 123603002 123603294 -129653289 - AluSx SINE Alu -20 292 1 632 242 96 30 chr2 123603294 123603564 -129653019 + L1MC5 LINE L1 7624 7917 -44 301 167 28 69 chr2 123603571 123603643 -129652940 - L1MCa LINE L1 -4362 2064 1996 * 364 274 22 29 chr2 123603581 123603746 -129652837 + L1MC4 LINE L1 6548 6645 -1140 355 307 0 0 chr2 123603708 123603796 -129652787 - L1MC4 LINE L1 -1341 6701 6614 * 313 209 45 0 chr2 123603779 123603846 -129652737 - L1MCa LINE L1 -4362 2064 1995 * 351 330 0 0 chr2 123603803 123603894 -129652689 + L1MC4 LINE L1 6613 6703 -1339 489 285 204 31 chr2 123604868 123605289 -129651294 - HAL1 LINE L1 0 2507 2014 742 139 184 0 chr2 123606022 123606180 -129650403 + MER53 DNA DNA 1 187 -2 2330 114 0 0 chr2 123606289 123606596 -129649987 - AluSx SINE Alu -3 309 3 1594 136 90 69 chr2 123606620 123606996 -129649587 + MLT1B LTR MaLR 3 386 -4 198 216 0 0 chr2 123607461 123607498 -129649085 + L2 LINE L2 3230 3266 -6 342 172 56 16 chr2 123607907 123608003 -129648580 - MER5A DNA MER1_type -73 105 5 632 190 25 0 chr2 123608026 123608147 -129648436 - MER5A DNA MER1_type -48 141 18 191 293 123 0 chr2 123608509 123608615 -129647968 - MIR3 SINE MIR -32 176 58 907 122 11 17 chr2 123608783 123608917 -129647666 + (GGAA)n Simple_repeat Simple_repeat 2 136 -44 252 0 0 0 chr2 123608917 123608945 -129647638 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 907 122 11 17 chr2 123608945 123608990 -129647593 + (GGAA)n Simple_repeat Simple_repeat 136 180 0 249 254 56 21 chr2 123609234 123609376 -129647207 + L1ME LINE L1 5751 5897 -224 1841 169 27 3 chr2 123609527 123609822 -129646761 + AluJb SINE Alu 2 303 -9 336 245 223 14 chr2 123610174 123610313 -129646270 + MER5B DNA MER1_type 9 176 -2 527 277 37 37 chr2 123611280 123611468 -129645115 - Charlie8 DNA MER1_type -2131 286 99 434 284 96 52 chr2 123612775 123613141 -129643442 + HAL1 LINE L1 1 382 -2125 1072 221 7 37 chr2 123613300 123613407 -129643176 + MER33 DNA MER1_type 35 144 -2441 2306 112 0 0 chr2 123613407 123613703 -129642880 + AluSq SINE Alu 1 296 -17 1072 221 7 37 chr2 123613703 123613889 -129642694 + MER33 DNA MER1_type 144 319 -5 2304 268 128 15 chr2 123614037 123614896 -129641687 + HAL1 LINE L1 634 1655 -852 2191 115 20 0 chr2 123614896 123615192 -129641391 - AluSx SINE Alu -8 304 3 2304 268 128 15 chr2 123615192 123615473 -129641110 + HAL1 LINE L1 1655 1903 -604 2238 181 33 18 chr2 123615491 123615944 -129640639 + MLT1C LTR MaLR 8 467 0 613 309 52 116 chr2 123615952 123616264 -129640319 + HAL1 LINE L1 1910 2162 -345 1717 172 0 4 chr2 123616264 123616526 -129640057 + AluJo SINE Alu 1 261 -51 613 309 52 116 chr2 123616526 123616850 -129639733 + HAL1 LINE L1 2162 2505 -2 1977 146 0 39 chr2 123616868 123617177 -129639406 + AluJb SINE Alu 1 297 -15 2469 78 0 0 chr2 123617177 123617472 -129639111 + AluY SINE Alu 1 296 -15 587 180 65 0 chr2 123617597 123617736 -129638847 + MER5A DNA MER1_type 3 150 -39 500 273 198 10 chr2 123617882 123618271 -129638312 + L1ME4a LINE L1 5584 6045 -76 291 355 9 0 chr2 123618465 123618572 -129638011 + L2 LINE L2 3205 3312 -1 597 136 0 0 chr2 123619231 123619334 -129637249 + (TGGA)n Simple_repeat Simple_repeat 4 106 0 376 296 164 19 chr2 123619343 123619556 -129637027 + MIR SINE MIR 16 259 -3 529 327 107 28 chr2 123619697 123620088 -129636495 + MLT1K LTR MaLR 167 588 0 302 236 10 156 chr2 123620215 123620289 -129636294 - MIR SINE MIR -63 145 102 2365 109 3 0 chr2 123620289 123620592 -129635991 + AluSp SINE Alu 1 304 -9 302 236 10 156 chr2 123620592 123620679 -129635904 - MIR SINE MIR -106 102 4 318 155 17 17 chr2 123621186 123621244 -129635339 - MIR3 SINE MIR -53 155 98 220 318 30 0 chr2 123621784 123621850 -129634733 - MIR SINE MIR -118 90 23 225 0 0 0 chr2 123621922 123621947 -129634636 + (CA)n Simple_repeat Simple_repeat 2 26 0 681 261 129 55 chr2 123622067 123622486 -129634097 + MLT1L LTR MaLR 64 615 0 1158 173 144 61 chr2 123623329 123623606 -129632977 + AluJo SINE Alu 1 300 -2 396 227 102 55 chr2 123623705 123623833 -129632750 + MIR3 SINE MIR 3 136 -72 1346 222 84 30 chr2 123623952 123624358 -129632225 + MLT1K LTR MaLR 160 587 -1 279 164 202 39 chr2 123624360 123624464 -129632119 + MIR SINE MIR 133 253 -9 204 304 36 0 chr2 123624889 123624945 -129631638 - L3b LINE CR1 -2 1581 1524 835 278 73 99 chr2 123624973 123625329 -129631254 - L3 LINE CR1 -46 1531 1167 1801 166 3 0 chr2 123625329 123625612 -129630971 + AluJb SINE Alu 1 284 -28 300 70 0 0 chr2 123625612 123625655 -129630928 + (CATA)n Simple_repeat Simple_repeat 2 44 0 835 278 73 99 chr2 123625655 123625912 -129630671 - L3 LINE CR1 -408 1169 933 2015 121 28 3 chr2 123625957 123626247 -129630336 + AluSx SINE Alu 1 297 -15 885 259 90 19 chr2 123626380 123626759 -129629824 + L1ME4a LINE L1 5536 5941 -180 28 0 0 0 chr2 123626791 123626819 -129629764 + AT_rich Low_complexity Low_complexity 1 28 0 255 191 0 0 chr2 123626824 123626871 -129629712 - MER116 DNA Mariner -12 68 22 362 290 49 12 chr2 123626927 123627089 -129629494 + L1ME4a LINE L1 5953 6120 -1 263 289 39 10 chr2 123627111 123627201 -129629382 + L3 LINE CR1 854 946 -631 938 257 43 8 chr2 123627201 123627454 -129629129 + MIR SINE MIR 1 262 0 284 254 0 0 chr2 123627604 123627663 -129628920 + L3 LINE CR1 1085 1143 -434 460 195 0 12 chr2 123627823 123627905 -129628678 - MER58A DNA MER1_type -24 83 3 306 323 24 16 chr2 123628227 123628351 -129628232 - L3 LINE CR1 -669 908 784 2176 128 0 0 chr2 123628452 123628749 -129627834 - AluSx SINE Alu -15 297 1 245 273 156 19 chr2 123628971 123629125 -129627458 - L3 LINE CR1 -820 757 583 445 227 184 61 chr2 123629522 123629723 -129626860 + MIR SINE MIR 16 244 -18 353 233 14 0 chr2 123629730 123629803 -129626780 - L2 LINE L2 -12 3301 3228 300 219 98 12 chr2 123629805 123629887 -129626696 + L2 LINE L2 3184 3272 0 1460 164 63 39 chr2 123630388 123630674 -129625909 - AluJb SINE Alu -19 293 1 211 189 27 0 chr2 123630677 123630714 -129625869 - L2 LINE L2 -12 3260 3223 * 679 243 108 0 chr2 123630681 123630903 -129625680 - MIR SINE MIR -10 252 7 474 258 16 0 chr2 123631395 123631523 -129625060 - MIR SINE MIR -119 143 14 225 271 104 10 chr2 123632426 123632522 -129624061 - MIR SINE MIR -74 188 84 242 292 83 31 chr2 123632652 123632748 -129623835 + MIR SINE MIR 22 122 -140 528 132 40 0 chr2 123633351 123633503 -129623080 + (TA)n Simple_repeat Simple_repeat 2 159 0 2901 168 50 67 chr2 123634877 123635269 -129621314 - L1MC3 LINE L1 -1238 6547 6171 1623 177 7 20 chr2 123635269 123635569 -129621014 - AluJb SINE Alu -16 296 1 2901 168 50 67 chr2 123635569 123635879 -129620704 - L1MC3 LINE L1 -1614 6171 5857 799 211 0 0 chr2 123635880 123636013 -129620570 + FLAM_C SINE Alu 1 133 0 691 208 39 31 chr2 123636048 123636252 -129620331 - L1MC4 LINE L1 -231 7635 7377 356 230 8 103 chr2 123636292 123636418 -129620165 + MER58A DNA MER1_type 107 220 -4 928 248 112 22 chr2 123636419 123636733 -129619850 - L1MC4 LINE L1 -592 7450 7109 1873 146 7 10 chr2 123636941 123637242 -129619341 + AluJb SINE Alu 1 300 -12 294 205 47 71 chr2 123637408 123637535 -129619048 + L1MC4 LINE L1 7918 8041 -1 4484 237 82 37 chr2 123638112 123639584 -129616999 + L1MEc LINE L1 9 1546 -4850 2001 101 83 11 chr2 123639603 123639881 -129616702 - AluSx SINE Alu -14 298 1 10038 230 80 28 chr2 123639909 123641813 -129614770 + L1MEc LINE L1 1630 3435 -2800 721 231 0 0 chr2 123641813 123641943 -129614640 + FLAM_A SINE Alu 1 130 -3 10038 230 80 28 chr2 123641943 123642134 -129614449 + L1MEc LINE L1 3435 3615 -2620 2278 176 25 42 chr2 123642134 123642565 -129614018 - MSTB LTR MaLR -2 424 1 10038 230 80 28 chr2 123642565 123644339 -129612244 + L1MEc LINE L1 3615 5661 -574 1630 153 37 24 chr2 123644339 123644492 -129612091 - AluJo SINE Alu -13 299 139 2217 91 7 0 chr2 123644492 123644778 -129611805 - AluSx SINE Alu -7 305 18 1630 153 37 24 chr2 123644778 123644919 -129611664 - AluJo SINE Alu -173 139 1 10038 230 80 28 chr2 123644919 123645074 -129611509 + L1MEc LINE L1 5661 5807 -428 270 297 144 0 chr2 123645242 123645353 -129611230 + MIR3 SINE MIR 35 161 -47 * 418 238 57 9 chr2 123645350 123645455 -129611128 - L2 LINE L2 0 3313 3204 416 310 36 27 chr2 123646001 123646297 -129610286 + MER102b DNA MER1_type 1 329 -12 239 0 32 0 chr2 123646312 123646343 -129610240 + (TTTTG)n Simple_repeat Simple_repeat 5 36 0 1637 149 24 28 chr2 123646654 123646942 -129609641 + AluJo SINE Alu 1 287 -25 713 232 28 131 chr2 123647154 123647465 -129609118 - L1MC4a LINE L1 -1862 5946 5683 1802 179 0 3 chr2 123647465 123647750 -129608833 + AluJb SINE Alu 1 284 -28 713 232 28 131 chr2 123647750 123647835 -129608748 - L1MC4a LINE L1 -2125 5683 5591 183 80 0 0 chr2 123647837 123647862 -129608721 + (TA)n Simple_repeat Simple_repeat 1 25 0 2243 140 64 0 chr2 123648268 123648610 -129607973 + THE1B LTR MaLR 1 364 0 25 31 0 0 chr2 123648825 123648857 -129607726 + AT_rich Low_complexity Low_complexity 1 32 0 2036 130 17 0 chr2 123651148 123651440 -129605143 + AluSx SINE Alu 1 297 -15 218 231 58 0 chr2 123652520 123652572 -129604011 + L2 LINE L2 3218 3272 0 285 235 29 0 chr2 123653245 123653313 -129603270 + L2 LINE L2 3239 3308 -5 23 33 0 0 chr2 123653458 123653488 -129603095 + AT_rich Low_complexity Low_complexity 1 30 0 662 200 8 0 chr2 123653488 123653608 -129602975 - MLT1D LTR MaLR -42 463 343 240 35 0 0 chr2 123654764 123654793 -129601790 + (TG)n Simple_repeat Simple_repeat 2 30 0 246 197 23 28 chr2 123655014 123655092 -129601491 + L1ME2 LINE L1 6086 6161 -1 359 308 95 44 chr2 123655121 123655573 -129601010 + L1ME4a LINE L1 4487 4961 -1185 409 227 31 49 chr2 123655628 123655791 -129600792 + L1MC5 LINE L1 7795 7954 -7 189 0 0 0 chr2 123655937 123655958 -129600625 + (A)n Simple_repeat Simple_repeat 1 21 0 464 185 104 30 chr2 123656100 123656235 -129600348 + L1ME4a LINE L1 5383 5527 -2281 1652 172 0 28 chr2 123656356 123656647 -129599936 - AluJo SINE Alu -9 303 21 2321 94 3 3 chr2 123656928 123657227 -129599356 - AluY SINE Alu -12 299 1 1871 168 0 7 chr2 123657423 123657726 -129598857 + AluJb SINE Alu 1 301 -11 394 319 63 5 chr2 123657854 123658061 -129598522 - MIR SINE MIR -20 242 24 1852 124 0 8 chr2 123659085 123659344 -129597239 - AluSx SINE Alu -16 296 40 245 311 77 52 chr2 123659806 123660172 -129596411 + L1M4 LINE L1 4790 5164 -982 2162 123 0 43 chr2 123660252 123660578 -129596005 + AluSx SINE Alu 1 312 0 619 205 25 16 chr2 123660782 123660904 -129595679 + FLAM_C SINE Alu 2 124 -19 353 264 0 0 chr2 123660906 123660978 -129595605 + MIR SINE MIR 26 97 -165 2175 114 3 7 chr2 123661307 123661614 -129594969 - AluSx SINE Alu -6 306 1 270 219 81 94 chr2 123661661 123661821 -129594762 + L1ME4a LINE L1 5949 6106 -15 233 373 70 6 chr2 123661840 123661998 -129594585 + MIR SINE MIR 18 185 -77 2443 84 3 0 chr2 123662514 123662812 -129593771 - AluSx SINE Alu -13 299 1 246 95 0 0 chr2 123664003 123664045 -129592538 + (T)n Simple_repeat Simple_repeat 1 42 0 261 0 0 0 chr2 123668864 123668893 -129587690 + (TG)n Simple_repeat Simple_repeat 2 30 0 316 299 29 22 chr2 123668897 123669034 -129587549 - L2 LINE L2 -237 3035 2898 2131 143 22 17 chr2 123669052 123669409 -129587174 + MER47A DNA MER2_type 7 365 -1 381 215 88 79 chr2 123669751 123669929 -129586654 - MIR SINE MIR -56 206 25 21 0 0 0 chr2 123670161 123670182 -129586401 + AT_rich Low_complexity Low_complexity 1 21 0 583 205 29 10 chr2 123670330 123670470 -129586113 + MLT1C LTR MaLR 247 315 -50 398 296 94 53 chr2 123670487 123670751 -129585832 + L1M4 LINE L1 3792 4081 -2065 1710 152 0 8 chr2 123670751 123671008 -129585575 + AluJb SINE Alu 1 255 -57 398 296 94 53 chr2 123671008 123671159 -129585424 + L1M4 LINE L1 4081 4224 -1922 487 261 158 25 chr2 123671216 123671817 -129584766 + L1M4 LINE L1 4447 5122 -1024 830 154 0 8 chr2 123671861 123671984 -129584599 + FLAM_A SINE Alu 1 122 -11 1839 150 38 0 chr2 123672174 123672461 -129584122 + AluJb SINE Alu 3 300 -12 182 243 95 40 chr2 123672656 123672730 -129583853 - MIR SINE MIR -12 250 173 387 333 30 8 chr2 123672752 123672884 -129583699 + MIR SINE MIR 117 251 -11 205 252 210 25 chr2 123672924 123673043 -129583540 - MIR SINE MIR -62 146 6 210 237 0 0 chr2 123673540 123673578 -129583005 + (CATG)n Simple_repeat Simple_repeat 1 38 0 2474 254 226 51 chr2 123674562 123676491 -129580092 + L2 LINE L2 477 2743 -571 566 310 43 30 chr2 123676568 123676875 -129579708 + L2 LINE L2 2913 3313 0 2272 116 0 3 chr2 123676890 123677214 -129579369 - AluSx SINE Alu 0 312 1 370 232 43 92 chr2 123677907 123678071 -129578512 + MIR SINE MIR 8 163 -99 2351 107 0 0 chr2 123679110 123679419 -129577164 - AluSx SINE Alu -3 309 1 2492 71 0 0 chr2 123680266 123680561 -129576022 - AluSc SINE Alu -14 295 1 282 255 68 75 chr2 123681293 123681454 -129575129 - HAL1 LINE L1 -2298 209 50 2161 57 46 0 chr2 123681545 123681808 -129574775 + AluY SINE Alu 23 297 -14 524 216 44 119 chr2 123681808 123682035 -129574548 - L1ME2 LINE L1 -10 6154 5945 750 218 74 15 chr2 123682751 123682947 -129573636 - MIR SINE MIR -3 259 52 385 352 41 41 chr2 123683120 123683535 -129573048 + L2 LINE L2 2541 2955 -359 2472 89 0 0 chr2 123683717 123684019 -129572564 - AluSc SINE Alu -7 302 1 382 278 74 0 chr2 123684936 123685044 -129571539 - MIR SINE MIR -65 197 82 2362 109 0 0 chr2 123686190 123686502 -129570081 + AluSx SINE Alu 1 312 0 1320 117 0 16 chr2 123687789 123687977 -129568606 - AluSg/x SINE Alu -6 304 120 570 228 95 61 chr2 123688055 123688318 -129568265 - MER113 DNA MER1_type? -96 425 154 711 185 0 7 chr2 123688420 123688555 -129568028 - AluJb SINE Alu 0 312 179 1626 117 66 0 chr2 123688568 123688824 -129567759 + L1PA14 LINE L1 5889 6161 0 547 193 112 91 chr2 123688853 123689005 -129567578 - MIR SINE MIR -70 192 34 1557 177 30 30 chr2 123689005 123689310 -129567273 - AluJb SINE Alu -7 305 1 547 193 112 91 chr2 123689310 123689344 -129567239 - MIR SINE MIR -228 34 2 2303 85 0 0 chr2 123689380 123689696 -129566887 + AluSx SINE Alu 1 316 0 2419 105 0 3 chr2 123690198 123690512 -129566071 + AluSq SINE Alu 1 313 0 3536 72 13 0 chr2 123691045 123691501 -129565082 - L1PA8 LINE L1 -5 6167 5706 422 298 50 0 chr2 123691561 123691682 -129564901 + L2 LINE L2 3146 3272 0 396 278 148 17 chr2 123692129 123692359 -129564224 - L1ME2 LINE L1 -223 5947 5688 2138 125 24 0 chr2 123692392 123692688 -129563895 + AluSx SINE Alu 1 303 -9 2575 144 18 26 chr2 123693566 123694018 -129562565 - MER83 LTR ERV1 0 448 1 2320 105 10 0 chr2 123694298 123694593 -129561990 - AluSx SINE Alu -14 298 1 1418 236 45 11 chr2 123694714 123695181 -129561402 - L1M4 LINE L1 -2987 3159 2677 3813 68 101 0 chr2 123695181 123695697 -129560886 + L1PA6 LINE L1 5587 6154 0 846 149 8 0 chr2 123695716 123695837 -129560746 + FLAM_C SINE Alu 2 123 -20 1366 160 9 0 chr2 123695855 123696067 -129560516 + AluJo SINE Alu 89 302 -10 643 212 7 0 chr2 123696067 123696204 -129560379 - L1M4 LINE L1 -3461 2685 2548 421 175 0 0 chr2 123696220 123696300 -129560283 + FLAM_A SINE Alu 63 142 0 1018 126 0 0 chr2 123696326 123696461 -129560122 + AluYb8 SINE Alu 1 135 -183 505 204 276 19 chr2 123696463 123696656 -129559927 - L1M4 LINE L1 -3615 2531 2389 2089 147 0 3 chr2 123696656 123696962 -129559621 - AluY SINE Alu -6 305 1 505 204 276 19 chr2 123696962 123696995 -129559588 - L1M4 LINE L1 -3757 2389 2366 791 187 0 15 chr2 123696995 123697129 -129559454 - FLAM_A SINE Alu 0 133 2 505 204 276 19 chr2 123697129 123697224 -129559359 - L1M4 LINE L1 -3780 2366 2126 1749 144 46 33 chr2 123697277 123697583 -129559000 - AluJo SINE Alu -2 310 1 1459 267 144 90 chr2 123697594 123698143 -129558440 - L1MDa LINE L1 -2695 3520 3002 1886 145 14 27 chr2 123698143 123698440 -129558143 + AluJo SINE Alu 1 293 -19 1459 267 144 90 chr2 123698440 123699053 -129557530 - L1MDa LINE L1 -3213 3002 2296 279 224 0 0 chr2 123699061 123699128 -129557455 - L1MDa LINE L1 -3947 2270 2204 1619 271 59 2 chr2 123699132 123699541 -129557042 + MER70B LTR ERVL 4 435 -143 313 289 153 11 chr2 123699730 123699920 -129556663 - L1MDa LINE L1 -4004 2211 1995 2312 105 3 0 chr2 123700037 123700333 -129556250 - AluSp SINE Alu -16 297 1 331 300 139 25 chr2 123700383 123701110 -129555473 - L1MDa LINE L1 -4566 1830 1021 303 237 0 0 chr2 123701304 123701363 -129555220 - L1MDa LINE L1 -5469 736 678 807 313 99 33 chr2 123701996 123702664 -129553919 + L2 LINE L2 1276 1987 -1327 303 28 0 0 chr2 123702678 123702714 -129553869 + (CA)n Simple_repeat Simple_repeat 2 37 0 24 53 0 0 chr2 123702801 123702839 -129553744 + AT_rich Low_complexity Low_complexity 1 38 0 504 213 43 24 chr2 123702852 123703016 -129553567 + MER20B DNA MER1_type 617 783 0 355 268 189 7 chr2 123703841 123703994 -129552589 + MER5A DNA MER1_type 9 189 0 204 328 114 15 chr2 123704131 123704262 -129552321 + L2 LINE L2 3128 3271 -1 203 229 21 0 chr2 123706409 123706457 -129550126 + (TA)n Simple_repeat Simple_repeat 1 49 0 396 229 48 19 chr2 123707014 123707119 -129549464 + MIR SINE MIR 43 150 -112 1800 132 7 38 chr2 123707288 123707577 -129549006 + AluJo SINE Alu 7 286 -26 204 217 0 0 chr2 123707579 123707625 -129548958 + (TATATG)n Simple_repeat Simple_repeat 3 48 0 2184 76 79 21 chr2 123709483 123709774 -129546809 + AluSp SINE Alu 1 308 -5 475 271 53 24 chr2 123709940 123710110 -129546473 + MER5B DNA MER1_type 3 177 -1 2505 68 0 46 chr2 123711156 123711480 -129545103 + AluY SINE Alu 1 309 -2 4132 114 27 5 chr2 123711609 123712230 -129544353 + MER41B LTR ERV1 1 635 0 200 390 112 0 chr2 123712428 123712597 -129543986 - MIR SINE MIR -52 210 23 552 274 39 51 chr2 123712747 123713002 -129543581 + MER112 DNA MER1_type 4 255 -5 260 359 25 0 chr2 123713180 123713309 -129543274 - MIR SINE MIR -62 146 43 474 223 21 0 chr2 123714169 123714263 -129542320 + L2 LINE L2 3177 3272 0 583 157 0 150 chr2 123714318 123714471 -129542112 - FLAM_A SINE Alu -3 130 1 260 274 85 0 chr2 123714547 123714653 -129541930 + MER103 DNA DNA 52 166 0 790 235 25 15 chr2 123715510 123715710 -129540873 - MIR SINE MIR -34 228 27 225 283 163 22 chr2 123716151 123716243 -129540340 - L2 LINE L2 -9 3263 3159 298 258 172 16 chr2 123716810 123716938 -129539645 + MIR3 SINE MIR 30 177 -31 250 290 32 0 chr2 123719108 123719170 -129537413 - L3 LINE CR1 -252 1325 1262 204 278 0 0 chr2 123719655 123719709 -129536874 - MIR SINE MIR -68 140 87 275 196 185 43 chr2 123719794 123719886 -129536697 + L2 LINE L2 3166 3270 -2 1003 236 29 16 chr2 123719936 123720178 -129536405 + MIR SINE MIR 8 252 -10 180 0 0 0 chr2 123720913 123720933 -129535650 + (CAA)n Simple_repeat Simple_repeat 2 21 0 934 272 158 16 chr2 123720947 123721695 -129534888 + L2 LINE L2 2381 3240 -73 294 260 71 39 chr2 123722456 123722583 -129534000 - MIR SINE MIR -62 146 16 302 262 68 29 chr2 123723061 123723164 -129533419 - MIR SINE MIR -43 219 113 229 243 43 0 chr2 123723172 123723242 -129533341 + L2 LINE L2 2918 2990 -282 384 305 70 0 chr2 123723839 123723967 -129532616 + MIR SINE MIR 7 143 -119 180 0 0 0 chr2 123725185 123725205 -129531378 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 926 219 126 60 chr2 123725349 123725539 -129531044 + Charlie4a DNA MER1_type 46 222 -1739 1571 159 36 11 chr2 123725539 123725872 -129530711 + AluJo SINE Alu 1 340 0 926 219 126 60 chr2 123725872 123726078 -129530505 + Charlie4a DNA MER1_type 222 469 -39 319 291 78 0 chr2 123726252 123726355 -129530228 + MIR SINE MIR 35 145 -63 511 332 13 16 chr2 123726457 123726689 -129529894 - MIR SINE MIR -15 247 18 922 241 69 0 chr2 123727214 123727430 -129529153 + MIR SINE MIR 20 250 -12 193 280 194 0 chr2 123727911 123728004 -129528579 - L2 LINE L2 -18 3254 3144 253 303 92 0 chr2 123728385 123728527 -129528056 + MIR3 SINE MIR 51 205 -3 724 273 30 0 chr2 123728747 123728945 -129527638 + MIR SINE MIR 14 217 -45 245 213 16 16 chr2 123728987 123729048 -129527535 + (TG)n Simple_repeat Simple_repeat 2 62 0 1071 132 0 42 chr2 123729844 123730034 -129526549 - AluSc SINE Alu -1 308 127 191 315 126 28 chr2 123730335 123730478 -129526105 - L2 LINE L2 -187 3085 2929 1734 72 0 0 chr2 123730595 123730817 -129525766 + AluSg/x SINE Alu 86 307 -5 241 299 65 0 chr2 123731101 123731208 -129525375 + L2 LINE L2 3144 3257 -15 3450 170 73 4 chr2 123731463 123732267 -129524316 + L1MB7 LINE L1 5173 6026 -158 246 190 0 17 chr2 123732283 123732341 -129524242 + L1MB8 LINE L1 6122 6178 0 1105 146 61 92 chr2 123732491 123732752 -129523831 + MSTB1 LTR MaLR 1 253 -179 342 200 78 0 chr2 123732756 123732846 -129523737 - MIR SINE MIR -70 138 42 366 123 0 3 chr2 123732936 123733012 -129523571 + MSTB1 LTR MaLR 358 426 0 413 274 89 0 chr2 123733674 123733820 -129522763 + MIR SINE MIR 53 211 -51 436 204 32 0 chr2 123734457 123734550 -129522033 - MER5A DNA MER1_type -9 180 85 390 300 40 0 chr2 123735289 123735389 -129521194 + MER91C DNA MER1_type 35 138 -2 183 318 102 23 chr2 123735427 123735515 -129521068 - L2 LINE L2 -18 3295 3201 300 267 27 0 chr2 123736424 123736499 -129520084 + L2 LINE L2 3235 3311 -2 233 250 0 0 chr2 123737718 123737770 -129518813 - MIR SINE MIR -107 155 104 384 22 0 0 chr2 123738693 123738738 -129517845 + (CA)n Simple_repeat Simple_repeat 2 46 0 246 116 0 0 chr2 123739691 123739734 -129516849 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 282 235 0 0 chr2 123740472 123740540 -129516043 + MIR SINE MIR 49 116 -146 1012 124 0 0 chr2 123740752 123740897 -129515686 + AluSg/x SINE Alu 116 260 -50 251 319 44 52 chr2 123740925 123741060 -129515523 - MER5A DNA MER1_type 0 189 56 2068 119 0 0 chr2 123741948 123742267 -129514316 + AluSx SINE Alu 1 319 0 266 184 0 0 chr2 123743028 123743077 -129513506 + L2 LINE L2 3222 3270 -2 226 352 74 0 chr2 123743194 123743302 -129513281 + MIR SINE MIR 143 258 -4 224 305 109 8 chr2 123743961 123744089 -129512494 + MIR3 SINE MIR 30 170 -38 202 284 224 9 chr2 123744246 123744362 -129512221 - MIR3 SINE MIR -67 141 1 266 339 55 0 chr2 123744788 123744897 -129511686 - L2 LINE L2 -3 3269 3155 * 279 220 100 70 chr2 123744863 123744963 -129511620 - MER5A DNA MER1_type -49 140 38 235 276 41 41 chr2 123744892 123744990 -129511593 + MER5A DNA MER1_type 92 189 0 * 596 274 93 5 chr2 123745086 123745301 -129511282 + MIR SINE MIR 28 261 -1 204 292 156 0 chr2 123747617 123747713 -129508870 - L2 LINE L2 -1 3312 3202 189 310 0 17 chr2 123748394 123748452 -129508131 - L2 LINE L2 -20 3293 3237 * 852 275 161 19 chr2 123748442 123748992 -129507591 + L2 LINE L2 2677 3310 -3 304 244 213 8 chr2 123750419 123750546 -129506037 + MER5A DNA MER1_type 37 189 0 304 321 179 8 chr2 123751699 123751833 -129504750 - MIR SINE MIR -74 188 32 259 278 218 0 chr2 123752400 123752533 -129504050 + MIR SINE MIR 87 248 -14 624 219 130 26 chr2 123753170 123753362 -129503221 - MIR SINE MIR -1 261 50 188 209 0 23 chr2 123753814 123753857 -129502726 + MIR SINE MIR 114 155 -107 1256 181 4 16 chr2 123754394 123754637 -129501946 + AluJo SINE Alu 10 249 -63 1068 145 13 53 chr2 123754668 123754895 -129501688 - L1MA4 LINE L1 -8 6292 6075 370 338 64 6 chr2 123755511 123755668 -129500915 - MIR3 SINE MIR -35 173 8 2112 110 0 13 chr2 123755758 123756066 -129500517 - AluSx SINE Alu -7 305 2 2144 123 3 0 chr2 123756545 123756853 -129499730 - AluSq SINE Alu -4 309 1 3364 182 82 20 chr2 123758192 123758933 -129497650 + LTR48 LTR ERV1 1 787 0 2169 99 36 0 chr2 123759245 123759547 -129497036 + AluSq SINE Alu 1 313 0 303 268 0 10 chr2 123759813 123759910 -129496673 + MER112 DNA MER1_type 74 169 -91 210 282 60 26 chr2 123760202 123760319 -129496264 + MIR3 SINE MIR 82 202 -6 397 295 33 49 chr2 123760698 123760881 -129495702 - LTR16C LTR ERVL 0 491 312 314 179 12 119 chr2 123761335 123761419 -129495164 - MIR3 SINE MIR -15 193 119 210 172 138 0 chr2 123761439 123761497 -129495086 - MIR SINE MIR -109 153 88 222 292 32 52 chr2 123761957 123762111 -129494472 - MIR3 SINE MIR -11 197 47 221 0 35 0 chr2 123762562 123762591 -129493992 + (TTATA)n Simple_repeat Simple_repeat 2 31 0 270 289 0 10 chr2 123762724 123762821 -129493762 - MER112 DNA MER1_type -91 169 74 1237 204 0 34 chr2 123762863 123763127 -129493456 - AluJo SINE Alu -57 255 1 377 260 227 7 chr2 123763739 123763889 -129492694 - MER5A DNA MER1_type 0 189 7 2025 128 0 0 chr2 123763901 123764198 -129492385 + AluSx SINE Alu 1 297 -15 484 179 0 0 chr2 123764205 123764283 -129492300 - FLAM SINE Alu -16 127 50 1337 310 50 20 chr2 123764616 123765119 -129491464 + MER115 DNA AcHobo 5 522 -171 239 278 22 33 chr2 123765502 123765592 -129490991 + L2 LINE L2 3177 3265 -7 33 0 0 0 chr2 123765775 123765808 -129490775 + AT_rich Low_complexity Low_complexity 1 33 0 2079 126 3 0 chr2 123765957 123766259 -129490324 - AluSp SINE Alu -10 303 1 981 271 119 24 chr2 123766315 123766684 -129489899 - L1MC4a LINE L1 -1885 5923 5520 588 101 0 0 chr2 123767096 123767185 -129489398 + (TCCA)n Simple_repeat Simple_repeat 2 90 0 192 383 35 0 chr2 123767338 123767453 -129489130 - L2 LINE L2 -18 3254 3136 270 0 0 0 chr2 123768174 123768204 -129488379 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 2060 102 0 0 chr2 123768208 123768483 -129488100 - AluY SINE Alu -36 275 1 255 289 36 24 chr2 123768542 123768707 -129487876 + LTR16A1 LTR ERVL 83 232 -225 318 227 73 36 chr2 123768765 123768875 -129487708 + LTR16A1 LTR ERVL 344 457 0 489 321 45 35 chr2 123769027 123769314 -129487269 + L3 LINE CR1 881 1170 -407 527 258 45 56 chr2 123769468 123769559 -129487024 + MIR SINE MIR 64 154 -108 261 57 0 0 chr2 123769559 123769594 -129486989 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 2068 115 0 0 chr2 123769594 123769874 -129486709 - AluSx SINE Alu -32 280 1 1699 186 0 3 chr2 123769877 123770178 -129486405 - AluJb SINE Alu -12 300 1 527 258 45 56 chr2 123770178 123770285 -129486298 + MIR SINE MIR 155 259 -3 857 284 65 18 chr2 123770455 123770793 -129485790 + LTR16A LTR ERVL 1 354 -96 236 247 75 32 chr2 123770843 123770936 -129485647 + L2 LINE L2 3161 3257 -56 201 286 13 0 chr2 123771480 123771557 -129485026 + GA-rich Low_complexity Low_complexity 2 79 0 871 193 7 0 chr2 123774130 123774402 -129482181 + CT-rich Low_complexity Low_complexity 1 274 0 1025 96 22 11 chr2 123774417 123774595 -129481988 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 652 211 122 0 chr2 123774605 123774761 -129481822 - FRAM SINE Alu -1 175 1 180 268 54 18 chr2 123774766 123774822 -129481761 + MER5A DNA MER1_type 128 185 -4 1795 190 80 25 chr2 123775071 123775544 -129481039 - L1ME1 LINE L1 -19 6147 5649 455 277 8 15 chr2 123775558 123775688 -129480895 - L1M4 LINE L1 -2035 4111 3983 235 158 0 0 chr2 123775849 123775887 -129480696 - L2 LINE L2 -837 2477 2440 810 81 0 0 chr2 123775913 123776024 -129480559 + (TTCC)n Simple_repeat Simple_repeat 4 114 0 198 0 0 0 chr2 123776144 123776166 -129480417 + (TC)n Simple_repeat Simple_repeat 2 23 0 2095 138 0 0 chr2 123776166 123776455 -129480128 - AluJo SINE Alu -19 293 5 319 287 132 0 chr2 123776484 123776620 -129479963 - MIR SINE MIR -44 218 65 846 158 0 0 chr2 123777231 123777351 -129479232 + FLAM_C SINE Alu 1 120 -23 189 0 0 0 chr2 123777351 123777372 -129479211 + (TAA)n Simple_repeat Simple_repeat 2 22 0 1470 189 59 39 chr2 123777424 123777689 -129478894 - Charlie1b DNA MER1_type -2247 514 196 1423 186 69 22 chr2 123777689 123778111 -129478472 - AluJo SINE Alu 0 312 2 1470 189 59 39 chr2 123778111 123778311 -129478272 - Charlie1b DNA MER1_type -2565 196 2 275 226 75 68 chr2 123778368 123778501 -129478082 - LTR16C LTR ERVL 0 491 358 396 58 0 0 chr2 123778539 123778591 -129477992 + Alu SINE Alu 1 52 -248 391 58 0 0 chr2 123778597 123778649 -129477934 + Alu SINE Alu 1 52 -249 2348 92 0 3 chr2 123778655 123778984 -129477599 + AluSq SINE Alu 1 328 0 2276 144 42 0 chr2 123778984 123779365 -129477218 + MER57A LTR ERV1 7 403 0 357 289 84 54 chr2 123779375 123779541 -129477042 - LTR16C LTR ERVL -162 329 159 309 259 0 25 chr2 123779908 123779989 -129476594 - L1MC4 LINE L1 -1369 6673 6595 1290 190 29 81 chr2 123780243 123780627 -129475956 - MLT1A1 LTR MaLR -1 364 1 2082 154 0 19 chr2 123780710 123781028 -129475555 + AluSx SINE Alu 1 312 0 734 170 0 22 chr2 123781162 123781297 -129475286 - AluJo SINE Alu -177 135 4 3861 127 20 82 chr2 123781366 123782168 -129474415 + Tigger2 DNA MER2_type 3 754 -1964 1291 110 46 68 chr2 123782226 123782489 -129474094 + Tigger2 DNA MER2_type 2462 2718 0 3121 210 98 34 chr2 123782615 123782881 -129473702 + MER21B LTR ERV1 19 266 -597 2144 117 0 0 chr2 123782881 123783164 -129473419 + AluSx SINE Alu 18 300 -12 3121 210 98 34 chr2 123783164 123783691 -129472892 + MER21B LTR ERV1 266 863 0 1621 153 107 4 chr2 123784415 123784696 -129471887 - AluJb SINE Alu -2 310 1 2047 271 57 28 chr2 123784911 123785666 -129470917 + MER20B DNA MER1_type 1 777 -6 685 259 112 19 chr2 123785696 123786009 -129470574 + MLT1L LTR MaLR 168 509 -106 189 107 0 0 chr2 123786396 123786424 -129470159 + (TTTTC)n Simple_repeat Simple_repeat 4 31 0 2268 109 0 7 chr2 123786489 123786791 -129469792 + AluSx SINE Alu 1 300 -12 740 178 0 0 chr2 123787090 123787219 -129469364 - FLAM_C SINE Alu -2 131 3 251 208 8 192 chr2 123789346 123789415 -129467168 + L2 LINE L2 3187 3227 -86 2454 102 0 0 chr2 123789415 123789728 -129466855 - AluSq SINE Alu 0 313 1 251 208 8 192 chr2 123789728 123789778 -129466805 + L2 LINE L2 3227 3284 -29 1190 223 181 3 chr2 123789884 123790220 -129466363 - MSTD LTR MaLR 0 396 1 198 306 0 0 chr2 123790234 123790283 -129466300 - MIR SINE MIR -108 100 52 181 244 0 24 chr2 123791540 123791581 -129465002 + MIR SINE MIR 25 64 -198 525 274 29 65 chr2 123792541 123792786 -129463797 - LTR16C LTR ERVL -214 277 42 257 247 48 92 chr2 123792804 123792948 -129463635 - MIR SINE MIR -63 145 19 2529 79 0 0 chr2 123793193 123793497 -129463086 - AluSx SINE Alu -8 304 1 2246 118 20 23 chr2 123793536 123793927 -129462656 + MLT1B LTR MaLR 1 390 0 230 345 64 0 chr2 123793963 123794073 -129462510 - MIR3 SINE MIR -35 173 57 623 190 42 21 chr2 123794526 123794668 -129461915 + MIR SINE MIR 48 192 -70 2403 78 13 0 chr2 123795919 123796225 -129460358 - AluSx SINE Alu -2 310 1 201 339 127 0 chr2 123796252 123796370 -129460213 + L2 LINE L2 3122 3254 -18 589 183 8 48 chr2 123796652 123796751 -129459832 + MLT2C1 LTR ERVL 3 98 -299 1532 158 153 42 chr2 123796751 123797136 -129459447 - MSTC LTR MaLR 0 428 1 589 183 8 48 chr2 123797136 123797162 -129459421 + MLT2C1 LTR ERVL 98 123 -274 709 194 0 7 chr2 123797165 123797309 -129459274 - AluJo/FRAM SINE Alu -9 303 161 1206 184 47 5 chr2 123797310 123797522 -129459061 - AluJo SINE Alu -91 221 1 857 199 70 101 chr2 123797523 123797743 -129458840 + MLT2C1 LTR ERVL 120 330 -67 2157 88 3 75 chr2 123797743 123798061 -129458522 - AluSp SINE Alu -18 295 1 857 199 70 101 chr2 123798061 123798127 -129458456 + MLT2C1 LTR ERVL 330 397 0 478 231 170 6 chr2 123798199 123798381 -129458202 - MIR SINE MIR -20 242 31 636 230 47 5 chr2 123798388 123798579 -129458004 - Charlie4 DNA MER1_type -7 1954 1756 2123 46 0 0 chr2 123798672 123798969 -129457614 + L1PA8 LINE L1 5887 6183 0 377 205 260 8 chr2 123798970 123799097 -129457486 - Charlie4 DNA MER1_type -1770 191 33 322 251 143 87 chr2 123799903 123799957 -129456626 - MIR SINE MIR -6 256 206 1668 177 33 17 chr2 123799957 123800256 -129456327 - 7SLRNA srpRNA srpRNA -16 304 1 322 251 143 87 chr2 123800256 123800432 -129456151 - MIR SINE MIR -56 206 13 390 184 0 0 chr2 123801093 123801169 -129455414 + CT-rich Low_complexity Low_complexity 2 77 0 831 266 12 20 chr2 123801526 123801770 -129454813 - MIR SINE MIR 0 262 21 882 202 16 27 chr2 123801870 123802053 -129454530 - AluJb SINE Alu -19 293 113 414 0 0 0 chr2 123802487 123802533 -129454050 + (TG)n Simple_repeat Simple_repeat 2 47 0 238 221 233 0 chr2 123803714 123803800 -129452783 + L2 LINE L2 3208 3313 0 207 0 0 0 chr2 123803957 123803980 -129452603 + (TC)n Simple_repeat Simple_repeat 2 24 0 190 343 95 7 chr2 123805003 123805140 -129451443 + L2 LINE L2 3163 3311 -2 592 214 6 6 chr2 123805158 123805317 -129451266 + GA-rich Low_complexity Low_complexity 3 161 0 27 29 0 0 chr2 123805479 123805513 -129451070 + AT_rich Low_complexity Low_complexity 1 34 0 458 242 136 0 chr2 123805724 123805856 -129450727 + MIR SINE MIR 113 262 0 594 244 70 33 chr2 123805862 123806075 -129450508 - MLT1J2 LTR MaLR -227 223 3 971 109 0 16 chr2 123806389 123806517 -129450066 - AluJb SINE Alu -186 126 1 1128 290 58 61 chr2 123806518 123807142 -129449441 + L2 LINE L2 2242 2863 -451 319 313 31 0 chr2 123807340 123807436 -129449147 + L2 LINE L2 3174 3272 0 306 304 8 95 chr2 123807466 123807729 -129448854 - L2 LINE L2 -87 3185 2946 2314 128 0 0 chr2 123808071 123808383 -129448200 + AluSx SINE Alu 1 312 0 734 256 29 21 chr2 123809022 123809260 -129447323 - MIR SINE MIR -3 259 20 227 304 143 0 chr2 123809461 123809573 -129447010 + MIR SINE MIR 124 251 -11 241 307 26 18 chr2 123809709 123809823 -129446760 + MARNA DNA Mariner 41 155 -431 207 368 23 0 chr2 123809905 123809992 -129446591 - MIR SINE MIR -76 132 44 2323 103 3 0 chr2 123810360 123810662 -129445921 - AluSp SINE Alu -10 303 1 24 91 0 0 chr2 123811635 123811701 -129444882 + GC_rich Low_complexity Low_complexity 1 66 0 371 309 14 0 chr2 123816263 123816402 -129440181 - MIR SINE MIR -65 143 13 584 214 117 7 chr2 123817939 123818093 -129438490 - MIR SINE MIR -72 190 20 502 273 58 103 chr2 123818313 123818661 -129437922 + L2 LINE L2 2941 3272 0 346 238 57 29 chr2 123820551 123820656 -129435927 - MIR SINE MIR -136 126 19 677 229 0 0 chr2 123820744 123820866 -129435717 - FLAM_C SINE Alu -19 124 3 206 290 174 0 chr2 123820872 123820941 -129435642 + MIR SINE MIR 123 203 -59 359 298 126 11 chr2 123821093 123821284 -129435299 + MIR SINE MIR 49 261 -1 250 268 70 63 chr2 123821401 123821543 -129435040 - MIR SINE MIR -3 259 117 389 310 50 45 chr2 123822299 123822541 -129434042 - MIR SINE MIR 0 262 20 222 294 15 15 chr2 123822807 123822875 -129433708 - L2 LINE L2 -4 3309 3242 202 139 23 0 chr2 123823261 123823304 -129433279 + (TG)n Simple_repeat Simple_repeat 1 44 0 323 293 110 19 chr2 123823875 123824012 -129432571 - MIR3 SINE MIR -77 131 13 555 149 0 0 chr2 123824185 123824292 -129432291 + (TCCA)n Simple_repeat Simple_repeat 4 110 0 187 281 31 16 chr2 123824298 123824362 -129432221 - L2 LINE L2 -4 3268 3204 422 174 70 9 chr2 123825606 123825721 -129430862 - MER96B DNA MER1_type? -42 375 254 1653 122 11 21 chr2 123825727 123826006 -129430577 - L1PB3 LINE L1 -2 6152 5877 558 299 95 9 chr2 123826247 123826468 -129430115 - MIR SINE MIR -3 259 20 820 231 48 35 chr2 123826546 123826789 -129429794 - MIR SINE MIR 0 262 12 413 319 31 123 chr2 123827588 123827971 -129428612 - L2 LINE L2 -1 3271 2924 436 279 93 11 chr2 123828499 123828663 -129427920 - MIR SINE MIR -63 145 20 437 231 168 14 chr2 123828670 123828813 -129427770 - MIR SINE MIR -76 186 22 796 285 97 41 chr2 123828829 123829295 -129427288 + L2 LINE L2 2822 3313 0 217 274 74 74 chr2 123830769 123830864 -129425719 + L2 LINE L2 3200 3294 -19 871 182 62 95 chr2 123830873 123831293 -129425290 + MLT1D LTR MaLR 3 497 -8 459 0 0 0 chr2 123831297 123831348 -129425235 + (CA)n Simple_repeat Simple_repeat 1 51 0 2015 135 3 33 chr2 123831579 123831883 -129424700 - AluJo SINE Alu -11 301 7 184 285 75 83 chr2 123831987 123832215 -129424368 + L2 LINE L2 2925 3150 -122 205 335 11 28 chr2 123833215 123833394 -129423189 + C-rich Low_complexity Low_complexity 4 179 0 406 275 128 7 chr2 123834002 123834151 -129422432 - MIR SINE MIR -50 212 46 241 232 18 0 chr2 123834562 123834618 -129421965 + MIR3 SINE MIR 133 189 -19 201 283 94 28 chr2 123834648 123834754 -129421829 + L2 LINE L2 3201 3313 0 1255 209 20 80 chr2 123835810 123836208 -129420375 + MLT1A2 LTR MaLR 1 374 0 391 258 106 8 chr2 123837272 123837404 -129419179 + MIR3 SINE MIR 33 177 -31 402 317 61 11 chr2 123837684 123837864 -129418719 + MIR SINE MIR 2 190 -72 2420 103 0 6 chr2 123838291 123838602 -129417981 - AluSc SINE Alu 0 309 1 279 217 13 77 chr2 123838946 123839048 -129417535 - L1MD2 LINE L1 -24 6142 6046 198 267 67 4 chr2 123839060 123839137 -129417446 + MIR SINE MIR 86 145 -63 474 327 45 14 chr2 123839200 123839420 -129417163 + MIR SINE MIR 36 262 0 186 174 217 0 chr2 123841001 123841047 -129415536 + MIR SINE MIR 85 140 -68 2107 119 0 31 chr2 123841096 123841415 -129415168 - AluSx SINE Alu -3 309 1 219 267 0 0 chr2 123841422 123841467 -129415116 + MIR3 SINE MIR 158 202 -6 541 220 107 7 chr2 123841470 123841620 -129414963 - MER5B DNA MER1_type 0 178 14 213 196 39 0 chr2 123842290 123842341 -129414242 + MIR SINE MIR 97 149 -59 252 333 36 0 chr2 123842388 123842472 -129414111 - MIR SINE MIR -106 156 70 2340 107 3 0 chr2 123842625 123842935 -129413648 + AluSx SINE Alu 1 311 -1 1808 186 68 22 chr2 123843615 123844029 -129412554 - MER31B LTR ERV1 0 466 34 308 209 67 48 chr2 123844127 123844232 -129412351 + MER5A DNA MER1_type 7 113 -76 * 362 165 21 7 chr2 123844165 123844255 -129412328 - MER5A DNA MER1_type -34 155 1 188 355 121 12 chr2 123844310 123844476 -129412107 + MIR SINE MIR 20 203 -59 254 221 106 58 chr2 123844555 123844659 -129411924 - MIR3 SINE MIR -41 167 59 202 280 0 0 chr2 123845266 123845316 -129411267 + MIR SINE MIR 94 143 -65 183 263 59 91 chr2 123845609 123845795 -129410788 + L2 LINE L2 3070 3249 -23 466 247 137 50 chr2 123846813 123846995 -129409588 + MIR SINE MIR 52 249 -13 347 288 27 18 chr2 123847056 123847167 -129409416 + MER5B DNA MER1_type 62 173 -5 820 223 88 5 chr2 123847199 123847392 -129409191 - MER3 DNA MER1_type 0 209 1 637 242 26 31 chr2 123847398 123847573 -129409010 - Charlie5 DNA MER1_type 0 2624 2449 2506 67 6 22 chr2 123847573 123847886 -129408697 - AluSp SINE Alu -5 308 1 637 242 26 31 chr2 123847886 123847937 -129408646 - Charlie5 DNA MER1_type -175 2449 2399 197 32 0 32 chr2 123849017 123849048 -129407535 + (CAGG)n Simple_repeat Simple_repeat 3 32 0 441 245 29 0 chr2 123850763 123850865 -129405718 + MIR SINE MIR 69 173 -89 237 310 14 0 chr2 123851577 123851648 -129404935 - MIR SINE MIR -61 147 76 537 310 58 7 chr2 123852022 123852235 -129404348 - MIR SINE MIR -15 247 30 243 333 0 30 chr2 123853727 123853859 -129402724 + MLT1K LTR MaLR 458 585 -3 387 345 41 29 chr2 123854148 123854319 -129402264 - MIR SINE MIR -29 233 61 202 382 59 24 chr2 123854443 123854613 -129401970 - L2 LINE L2 -8 3264 3089 188 333 0 0 chr2 123854870 123854921 -129401662 - MIR SINE MIR -9 253 203 2065 100 33 33 chr2 123855089 123855390 -129401193 - AluSx SINE Alu -11 301 1 213 94 0 0 chr2 123856021 123856053 -129400530 + (T)n Simple_repeat Simple_repeat 1 32 0 212 330 44 0 chr2 123857572 123857663 -129398920 - MIR SINE MIR -115 147 53 2635 135 84 18 chr2 123858043 123858554 -129398029 + LTR10A LTR ERV1 1 545 -64 427 296 65 18 chr2 123858966 123859135 -129397448 + MIR SINE MIR 27 203 -59 414 271 49 53 chr2 123859157 123859382 -129397201 - L1MC4a LINE L1 -1920 5888 5665 481 290 30 108 chr2 123859388 123859757 -129396826 + L2 LINE L2 2932 3271 -1 323 303 30 10 chr2 123859745 123859844 -129396739 - L2 LINE L2 -76 3196 3096 * 565 224 47 24 chr2 123859883 123860053 -129396530 - MER5B DNA MER1_type -2 176 3 325 157 16 207 chr2 123860135 123860187 -129396396 - MER5A DNA MER1_type -83 106 46 1096 124 0 21 chr2 123860187 123860373 -129396210 - L1MA9 LINE L1 0 6312 6131 2192 123 0 0 chr2 123860374 123860666 -129395917 - AluSx SINE Alu -20 292 1 325 157 16 207 chr2 123860666 123860732 -129395851 - MER5A DNA MER1_type -142 47 9 532 194 10 19 chr2 123860781 123860884 -129395699 + MER5B DNA MER1_type 55 156 -22 197 358 0 0 chr2 123861042 123861109 -129395474 + MIR SINE MIR 32 98 -110 264 59 0 0 chr2 123861110 123861144 -129395439 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 305 296 42 42 chr2 123861151 123861293 -129395290 - L2 LINE L2 -40 3273 3132 242 362 87 28 chr2 123862117 123862371 -129394212 + L2 LINE L2 2564 2832 -482 333 0 0 0 chr2 123862468 123862505 -129394078 + (CA)n Simple_repeat Simple_repeat 2 38 0 530 283 129 38 chr2 123863281 123863521 -129393062 + MIR SINE MIR 1 262 0 787 274 19 14 chr2 123863670 123863878 -129392705 - MIR SINE MIR -50 212 4 362 108 15 0 chr2 123864235 123864300 -129392283 + (GA)n Simple_repeat Simple_repeat 1 66 0 226 322 6 44 chr2 123864360 123864540 -129392043 + GA-rich Low_complexity Low_complexity 2 174 0 1905 138 144 6 chr2 123865045 123865406 -129391177 - MSTA LTR MaLR -17 411 1 739 277 62 22 chr2 123865603 123865827 -129390756 - MIR SINE MIR -10 252 20 957 305 72 55 chr2 123866267 123867302 -129389281 + L1MEc LINE L1 133 1185 -5211 1949 33 0 0 chr2 123867309 123867550 -129389033 + L1P LINE L1 4393 4633 -1513 1809 215 200 3 chr2 123867596 123868004 -129388579 - L1 LINE L1 -1472 4674 4348 213 94 0 0 chr2 123868004 123868036 -129388547 + (TG)n Simple_repeat Simple_repeat 1 32 0 1809 215 200 3 chr2 123868036 123868236 -129388347 - L1 LINE L1 -1798 4348 3946 * 38684 68 12 2 chr2 123868226 123874312 -129382271 - L1PA5 LINE L1 -8 6146 1 1478 184 16 57 chr2 123874321 123874636 -129381947 - AluJb SINE Alu -1 311 10 1152 190 25 25 chr2 123874664 123874948 -129381635 - L1 LINE L1 -2191 3955 3672 1077 274 117 22 chr2 123874957 123875639 -129380944 + L1MEc LINE L1 1601 2347 -4049 861 159 0 0 chr2 123875670 123875796 -129380787 - FLAM_C SINE Alu -16 127 2 1423 241 40 30 chr2 123875812 123876340 -129380243 + L1MEc LINE L1 2304 2836 -3379 4649 241 46 58 chr2 123876369 123877455 -129379128 + L1MEc LINE L1 3495 4549 -1666 2275 113 0 0 chr2 123877455 123877746 -129378837 + AluSx SINE Alu 1 291 -21 4649 241 46 58 chr2 123877746 123878613 -129377970 + L1MEc LINE L1 4549 5425 -790 225 154 0 0 chr2 123878634 123878673 -129377910 + CT-rich Low_complexity Low_complexity 2 40 0 188 135 27 0 chr2 123878753 123878790 -129377793 + (CCCA)n Simple_repeat Simple_repeat 2 39 0 2225 73 0 4 chr2 123880418 123880692 -129375891 + AluYa5 SINE Alu 39 311 0 309 279 35 114 chr2 123881397 123881598 -129374985 - L2 LINE L2 -53 3219 3035 603 103 0 0 chr2 123881853 123881950 -129374633 + (TCCA)n Simple_repeat Simple_repeat 3 99 0 239 266 177 35 chr2 123882282 123882395 -129374188 + L2 LINE L2 3144 3272 0 396 347 48 12 chr2 123882827 123882994 -129373589 - MER5B DNA MER1_type -3 175 3 548 241 79 88 chr2 123884095 123884189 -129372394 - MIR SINE MIR 0 262 169 2091 126 3 3 chr2 123884189 123884510 -129372073 + AluSp SINE Alu 1 321 0 548 241 79 88 chr2 123884510 123884642 -129371941 - MIR SINE MIR -93 169 37 603 237 29 5 chr2 123885505 123885712 -129370871 - MER113 DNA MER1_type? -287 234 23 2335 103 0 3 chr2 123885946 123886247 -129370336 - AluSx SINE Alu -12 300 1 728 285 98 42 chr2 123887014 123887463 -129369120 + MLT1L LTR MaLR 142 615 0 208 333 43 0 chr2 123887465 123887534 -129369049 - MIR SINE MIR -62 146 75 4249 169 39 26 chr2 123888150 123889122 -129367461 + L1MB8 LINE L1 5191 6177 -1 357 283 9 0 chr2 123889145 123889258 -129367325 - L1ME4a LINE L1 -276 5845 5732 42 20 0 0 chr2 123889293 123889342 -129367241 + AT_rich Low_complexity Low_complexity 1 49 0 547 282 106 74 chr2 123889565 123890292 -129366291 - L1ME4a LINE L1 -718 5403 4633 22 0 0 0 chr2 123890584 123890606 -129365977 + AT_rich Low_complexity Low_complexity 1 22 0 415 299 24 8 chr2 123891706 123891833 -129364750 + L3 LINE CR1 518 646 -931 180 77 0 0 chr2 123891847 123891873 -129364710 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 721 261 16 11 chr2 123892116 123892304 -129364279 - L1PB4 LINE L1 0 6156 5968 513 320 76 84 chr2 123892355 123892971 -129363612 + L3 LINE CR1 703 1313 -264 237 313 12 38 chr2 123893848 123894008 -129362575 - LTR16C LTR ERVL 0 491 336 665 280 181 0 chr2 123895589 123895860 -129360723 + L1ME3 LINE L1 5842 6161 -1 303 331 60 8 chr2 123895918 123896051 -129360532 - MIR SINE MIR -33 229 90 259 255 4 24 chr2 123896783 123896859 -129359724 - MIR SINE MIR -38 170 97 601 200 39 13 chr2 123896875 123897030 -129359553 + MLT1J2 LTR MaLR 53 211 -239 297 0 0 0 chr2 123897147 123897180 -129359403 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 2203 100 0 0 chr2 123897180 123897460 -129359123 - AluSx SINE Alu -32 280 1 266 182 0 18 chr2 123897485 123897540 -129359043 + MLT1J2 LTR MaLR 385 438 -12 282 143 0 0 chr2 123898843 123898892 -129357691 + (GGAA)n Simple_repeat Simple_repeat 2 50 0 493 307 28 17 chr2 123898989 123899165 -129357418 - MER5B DNA MER1_type 0 178 1 1007 108 177 0 chr2 123899170 123899328 -129357255 - MER5A DNA MER1_type -3 186 1 1268 215 53 50 chr2 123899607 123899889 -129356694 + LTR37A LTR ERV1 8 293 -133 2638 124 6 0 chr2 123899889 123900251 -129356332 - THE1B LTR MaLR 0 364 1 1268 215 53 50 chr2 123900251 123900386 -129356197 + LTR37A LTR ERV1 293 426 0 325 283 132 38 chr2 123901071 123901230 -129355353 - MER5A DNA MER1_type -14 175 2 181 224 17 52 chr2 123901435 123901493 -129355090 - L2 LINE L2 -28 3285 3230 295 308 156 55 chr2 123903177 123903593 -129352990 - L2 LINE L2 -6 3266 2809 279 264 198 0 chr2 123904259 123904426 -129352157 + L2 LINE L2 2303 2502 -812 457 291 91 18 chr2 123904517 123904834 -129351749 + LTR16C LTR ERVL 35 422 -69 334 351 89 18 chr2 123904866 123905091 -129351492 + L2 LINE L2 2580 2820 -494 233 271 57 0 chr2 123905137 123905207 -129351376 + L2 LINE L2 3008 3081 -191 2312 86 10 0 chr2 123905289 123905579 -129351004 - AluSq SINE Alu -19 294 2 239 294 77 42 chr2 123905656 123905799 -129350784 + MLT1J LTR MaLR 33 180 -331 1071 190 32 43 chr2 123906305 123906599 -129349984 - L1MB5 LINE L1 -1 6173 5880 27 0 0 0 chr2 123906616 123906643 -129349940 + AT_rich Low_complexity Low_complexity 1 27 0 1834 142 33 4 chr2 123906650 123906925 -129349658 - AluSq SINE Alu -30 283 1 1209 190 8 0 chr2 123906925 123907162 -129349421 - L1MB5 LINE L1 -264 5910 5672 444 239 114 54 chr2 123907297 123907401 -129349182 - MIR SINE MIR 0 262 166 2426 101 3 0 chr2 123907401 123907709 -129348874 - AluSq SINE Alu -4 309 1 444 239 114 54 chr2 123907709 123907788 -129348795 - MIR SINE MIR -96 166 68 998 132 5 68 chr2 123908684 123908874 -129347709 - FRAM SINE Alu 0 176 1 270 164 0 0 chr2 123908881 123908936 -129347647 + (CA)n Simple_repeat Simple_repeat 2 56 0 295 95 0 0 chr2 123908949 123908991 -129347592 - FLAM SINE Alu -22 111 70 240 195 0 0 chr2 123908979 123909020 -129347563 - Alu SINE Alu -92 41 1 * 284 283 103 33 chr2 123910037 123910221 -129346362 + L1ME LINE L1 5533 5729 -392 * 1043 198 92 0 chr2 123910214 123910452 -129346131 + L1MDa LINE L1 3 262 -6278 295 149 69 69 chr2 123910559 123910620 -129345963 + L1MA9 LINE L1 6201 6264 -48 1981 135 3 3 chr2 123910620 123910908 -129345675 - AluJo SINE Alu -18 294 7 295 149 69 69 chr2 123910908 123910933 -129345650 + L1MA9 LINE L1 6263 6287 -25 1284 193 77 75 chr2 123911294 123911683 -129344900 + MLT1B LTR MaLR 1 390 0 2155 87 20 43 chr2 123912430 123912729 -129343854 - AluSp SINE Alu -21 292 1 2381 88 0 19 chr2 123912987 123913332 -129343251 + AluSg SINE Alu 9 347 0 330 269 156 20 chr2 123913332 123913514 -129343069 + MIR SINE MIR 42 248 -14 1644 178 8 0 chr2 123913673 123913937 -129342646 + AluJb SINE Alu 1 266 -46 930 184 55 46 chr2 123914362 123914579 -129342004 + MER20 DNA MER1_type 1 219 0 353 277 115 61 chr2 123914794 123914942 -129341641 - L2 LINE L2 0 3272 3117 2233 110 0 7 chr2 123915468 123915768 -129340815 + AluSp SINE Alu 2 299 -14 453 228 88 22 chr2 123915871 123916007 -129340576 + MIR3 SINE MIR 36 180 -28 441 0 0 0 chr2 123916848 123916897 -129339686 + (TTA)n Simple_repeat Simple_repeat 2 50 0 259 317 75 70 chr2 123917101 123917287 -129339296 + MIR SINE MIR 32 218 -44 216 313 0 3 chr2 123918133 123918214 -129338369 + MIR SINE MIR 76 154 -69 858 101 0 0 chr2 123918620 123918729 -129337854 - AluJb SINE Alu -202 110 2 265 296 93 19 chr2 123918818 123918926 -129337657 - MIR SINE MIR -46 216 101 321 216 84 33 chr2 123920302 123920409 -129336174 - MIR SINE MIR -73 135 26 2522 144 104 36 chr2 123920409 123920964 -129335619 + LTR49 LTR ERV1 1 593 -2 321 216 84 33 chr2 123920964 123920975 -129335608 - MIR SINE MIR -182 26 17 327 207 95 35 chr2 123921093 123921209 -129335374 - LTR33 LTR ERVL -5 516 394 1965 188 44 61 chr2 123921240 123921714 -129334869 + MER31B LTR ERV1 1 466 0 2516 127 31 20 chr2 123921789 123922245 -129334338 + LTR29 LTR ERV1 1 461 -161 1805 135 25 18 chr2 123922243 123922351 -129334232 + LTR56 LTR ERV1 6 112 -333 * 2038 142 0 26 chr2 123922351 123922662 -129333921 - AluSx SINE Alu -9 303 1 1805 135 25 18 chr2 123922662 123922879 -129333704 + LTR56 LTR ERV1 112 333 -112 1367 7 0 0 chr2 123922880 123923029 -129333554 + AluYb8 SINE Alu 166 314 -4 327 200 38 38 chr2 123923739 123923819 -129332764 + LTR49-int LTR ERV1 1120 1199 -3672 2311 102 7 7 chr2 123923967 123924270 -129332313 + AluSp SINE Alu 1 303 -10 40 0 0 0 chr2 123924277 123924317 -129332266 + AT_rich Low_complexity Low_complexity 1 40 0 305 158 0 92 chr2 123924406 123924482 -129332101 + tRNA-Glu-GAG tRNA tRNA 7 75 0 258 87 0 22 chr2 123924482 123924528 -129332055 + LTR49-int LTR ERV1 1283 1327 -5004 * 648 176 87 49 chr2 123924504 123924666 -129331917 + LTR49-int LTR ERV1 935 1100 -4117 285 51 0 0 chr2 123924666 123924705 -129331878 + (CA)n Simple_repeat Simple_repeat 2 40 0 648 176 87 49 chr2 123924705 123924774 -129331809 + LTR49-int LTR ERV1 1100 1165 -4052 887 250 34 0 chr2 123924804 123925008 -129331575 + LTR49-int LTR ERV1 1838 2048 -4283 7970 194 63 30 chr2 123925227 123925879 -129330704 + L1MC2 LINE L1 569 1198 -5342 267 104 0 0 chr2 123925879 123925927 -129330656 + (CAGG)n Simple_repeat Simple_repeat 2 49 0 7970 194 63 30 chr2 123925927 123927906 -129328677 + L1MC2 LINE L1 1198 3288 -3252 1519 174 83 9 chr2 123927904 123928243 -129328340 + L1MC2 LINE L1 4222 4585 -1955 * 5944 137 8 32 chr2 123928252 123929309 -129327274 + L1MA4 LINE L1 5266 6297 -3 2196 168 16 28 chr2 123929337 123929410 -129327173 + L1MA4 LINE L1 5878 5950 -350 2350 95 0 0 chr2 123929410 123929704 -129326879 + AluY SINE Alu 1 294 -17 2196 168 16 28 chr2 123929704 123930054 -129326529 + L1MA4 LINE L1 5950 6296 -4 1567 227 54 22 chr2 123930054 123930256 -129326327 + L1MC2 LINE L1 4566 4760 -1780 1793 172 14 0 chr2 123930256 123930547 -129326036 + AluJb SINE Alu 1 295 -17 1567 227 54 22 chr2 123930547 123930841 -129325742 + L1MC2 LINE L1 4760 5078 -1462 684 165 0 198 chr2 123930871 123930993 -129325590 + L1MC2 LINE L1 6104 6248 -490 828 165 24 0 chr2 123930993 123931120 -129325463 + FLAM_C SINE Alu 2 131 -2 684 165 0 198 chr2 123931120 123931143 -129325440 + L1MC2 LINE L1 6248 6186 -552 2171 110 0 52 chr2 123931143 123931471 -129325112 + AluY SINE Alu 1 311 0 684 165 0 198 chr2 123931471 123931566 -129325017 + L1MC2 LINE L1 6185 6297 -441 890 192 154 33 chr2 123931567 123931807 -129324776 + AluSg SINE Alu 1 269 -41 2289 157 51 35 chr2 123931807 123932260 -129324323 + L1MC2 LINE L1 6272 6731 -7 3236 137 48 15 chr2 123932260 123932601 -129323982 + L1P2 LINE L1 5093 5421 -1128 2042 130 7 0 chr2 123932601 123932885 -129323698 + AluSx SINE Alu 9 294 -18 207 0 0 0 chr2 123932889 123932912 -129323671 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 3236 137 48 15 chr2 123932912 123933601 -129322982 + L1P2 LINE L1 5423 6174 -375 1353 71 0 0 chr2 123933601 123933768 -129322815 + L1PA4 LINE L1 5987 6155 0 3392 31 3 0 chr2 123933768 123934148 -129322435 + L1PA4 LINE L1 5770 6152 -3 4743 155 13 56 chr2 123934155 123934753 -129321830 + L1MD1 LINE L1 5354 5901 -341 1550 181 29 7 chr2 123934753 123935058 -129321525 - AluJo SINE Alu 0 311 1 4743 155 13 56 chr2 123935058 123935386 -129321197 + L1MD1 LINE L1 5901 6242 0 392 342 87 30 chr2 123935388 123935654 -129320929 + L1ME4a LINE L1 5734 6014 -107 2065 102 0 14 chr2 123935946 123936229 -129320354 - AluSc SINE Alu 0 309 31 565 290 92 14 chr2 123936259 123936476 -129320107 + MLT1J LTR MaLR 3 236 -275 2055 134 16 10 chr2 123936628 123936971 -129319612 - AluJb SINE Alu 0 345 1 1078 143 62 19 chr2 123936979 123937189 -129319394 - L1MA8 LINE L1 -3 6288 6070 1970 161 48 11 chr2 123937922 123938277 -129318306 - L1MB4 LINE L1 0 6180 5813 1618 126 15 26 chr2 123938277 123938537 -129318046 - L1PA5 LINE L1 -2 6152 5887 336 264 72 0 chr2 123938887 123939012 -129317571 - HAL1b LINE L1 -238 1110 977 896 231 92 60 chr2 123939066 123939197 -129317386 - HAL1 LINE L1 -47 2460 2335 2162 84 0 52 chr2 123939197 123939506 -129317077 + AluY SINE Alu 1 293 -18 896 231 92 60 chr2 123939506 123939842 -129316741 - HAL1 LINE L1 -172 2335 1978 1767 272 106 36 chr2 123939961 123940571 -129316012 - HAL1 LINE L1 -712 1795 1229 801 103 0 0 chr2 123940571 123940688 -129315895 + (TTCTCC)n Simple_repeat Simple_repeat 3 119 0 2245 97 0 0 chr2 123940688 123940978 -129315605 - AluSx SINE Alu -22 290 1 1767 272 106 36 chr2 123940978 123941355 -129315228 - HAL1 LINE L1 -1277 1230 738 512 190 82 87 chr2 123941485 123941669 -129314914 - HAL1 LINE L1 -2320 187 5 25 0 0 0 chr2 123941748 123941773 -129314810 + AT_rich Low_complexity Low_complexity 1 25 0 2202 104 3 7 chr2 123942874 123943172 -129313411 + AluSx SINE Alu 1 297 -15 370 328 52 17 chr2 123943354 123943470 -129313113 - L2 LINE L2 -9 3263 3144 1738 172 61 85 chr2 123943645 123944069 -129312514 + MLT2B3 LTR ERVL 5 418 -136 4088 178 18 3 chr2 123944222 123944958 -129311625 + L1MA9 LINE L1 5361 6107 -205 310 114 0 0 chr2 123944958 123945002 -129311581 + Alu SINE Alu 1 44 -258 2245 214 118 110 chr2 123945102 123945646 -129310937 + LTR49-int LTR ERV1 2069 2607 -3724 248 213 0 0 chr2 123945646 123945693 -129310890 - MER54A LTR ERVL 0 901 855 2245 214 118 110 chr2 123945693 123946235 -129310348 + LTR49-int LTR ERV1 2607 3210 -3121 1076 164 0 20 chr2 123946422 123946617 -129309966 + LTR49-int LTR ERV1 1445 1635 -4696 283 143 0 0 chr2 123946623 123946665 -129309918 + LTR49 LTR ERV1 554 595 0 364 174 87 0 chr2 123946666 123946735 -129309848 + LTR49-int LTR ERV1 1 75 -6256 1739 138 34 10 chr2 123946735 123947032 -129309551 - LTR49 LTR ERV1 -26 569 266 313 130 0 58 chr2 123947033 123947102 -129309481 - MER4-int LTR ERV1 -303 6028 5964 300 292 11 0 chr2 123947103 123947192 -129309391 - MER4-int LTR ERV1 -1935 2945 2856 1370 153 38 89 chr2 123947193 123947569 -129309014 - MER4-int LTR ERV1 -174 1612 1358 332 256 23 39 chr2 123947567 123947696 -129308887 - MER4-int LTR ERV1 -5077 1521 1395 * 838 78 0 0 chr2 123947698 123947801 -129308782 - AluSc SINE Alu -206 103 1 1615 141 59 4 chr2 123947802 123948058 -129308525 - MER39B LTR ERV1 -381 272 3 1183 140 0 0 chr2 123948062 123948248 -129308335 + L1MA4A LINE L1 6118 6303 0 915 231 58 19 chr2 123948268 123948528 -129308055 + MER67C LTR ERV1 118 387 -323 828 238 25 5 chr2 123948527 123948729 -129307854 + MER67C LTR ERV1 499 704 -6 * 262 278 0 0 chr2 123948792 123948846 -129307737 - L2 LINE L2 -5 3267 3214 830 228 99 43 chr2 123949194 123949427 -129307156 + MLT1K LTR MaLR 3 248 -340 486 286 71 29 chr2 123949477 123949715 -129306868 + MLT1K LTR MaLR 340 587 -1 27 0 0 0 chr2 123950184 123950211 -129306372 + AT_rich Low_complexity Low_complexity 1 27 0 2105 114 17 7 chr2 123950671 123950969 -129305614 + AluSx SINE Alu 1 301 -11 1188 231 174 37 chr2 123950973 123951249 -129305334 + MLT1G LTR MaLR 34 271 -355 1276 245 121 61 chr2 123951249 123951805 -129304778 + LTR49 LTR ERV1 5 593 -2 1188 231 174 37 chr2 123951805 123952011 -129304572 + MLT1G LTR MaLR 271 626 0 1871 242 76 47 chr2 123952029 123952736 -129303847 + L1MC4a LINE L1 5175 5403 -743 1626 136 42 42 chr2 123952767 123953054 -129303529 + AluJb SINE Alu 1 287 -25 291 329 100 58 chr2 123953326 123953458 -129303125 - L2 LINE L2 -9 3263 3115 1943 166 16 55 chr2 123953458 123953837 -129302746 + MLT1A1 LTR MaLR 2 365 0 291 329 100 58 chr2 123953837 123953944 -129302639 - L2 LINE L2 -157 3115 3014 560 192 17 33 chr2 123953960 123954080 -129302503 - MLT1H1 LTR MaLR -2 553 436 516 160 32 0 chr2 123954082 123954176 -129302407 - MLT1H1 LTR MaLR -447 108 12 1538 167 59 19 chr2 123954299 123954569 -129302014 + AluJo SINE Alu 2 282 -30 189 375 0 0 chr2 123954593 123954657 -129301926 - L2 LINE L2 -527 2787 2724 370 242 125 17 chr2 123954909 123955029 -129301554 - MER5A DNA MER1_type -6 183 51 498 304 88 29 chr2 123955144 123955450 -129301133 - MLT1L LTR MaLR -143 472 149 1771 163 14 7 chr2 123955458 123955752 -129300831 - AluJo SINE Alu -16 296 1 417 237 11 11 chr2 123956006 123956099 -129300484 + AluJo SINE Alu 42 134 -178 2276 87 7 3 chr2 123956311 123956610 -129299973 + AluSq SINE Alu 1 300 -13 1138 201 201 21 chr2 123957226 123957615 -129298968 + L1MC5 LINE L1 7452 7910 -51 358 269 83 113 chr2 123957978 123958375 -129298208 - L1M2 LINE L1 -5708 1141 757 255 61 0 0 chr2 123958562 123958595 -129297988 + (GGGGA)n Simple_repeat Simple_repeat 4 36 0 237 325 90 26 chr2 123960139 123960373 -129296210 + L2 LINE L2 2720 2968 -346 398 260 66 66 chr2 123960427 123960608 -129295975 - MIR SINE MIR -70 192 12 2119 103 3 14 chr2 123960803 123961095 -129295488 + AluSx SINE Alu 1 289 -23 33 0 0 0 chr2 123961106 123961139 -129295444 + AT_rich Low_complexity Low_complexity 1 33 0 552 254 148 19 chr2 123961433 123961479 -129295104 + MIR SINE MIR 14 53 -209 1923 164 7 0 chr2 123961479 123961784 -129294799 - AluJo SINE Alu 0 312 6 552 254 148 19 chr2 123961784 123961954 -129294629 + MIR SINE MIR 53 256 -6 548 327 23 14 chr2 123962941 123963155 -129293428 - MIR SINE MIR -15 247 32 278 219 143 29 chr2 123963178 123963283 -129293300 - MLT1K LTR MaLR -286 302 186 2518 191 29 28 chr2 123964254 123964842 -129291741 - L1MB7 LINE L1 -11 6173 5578 2614 200 48 0 chr2 123964869 123965390 -129291193 - L1MB7 LINE L1 -1066 5080 4535 180 0 0 0 chr2 123965682 123965702 -129290881 + (T)n Simple_repeat Simple_repeat 1 20 0 51 118 0 0 chr2 123965795 123966084 -129290499 + AT_rich Low_complexity Low_complexity 1 289 0 51 118 0 0 chr2 123966057 123966389 -129290194 + AT_rich Low_complexity Low_complexity 1 300 0 817 182 7 39 chr2 123967087 123967241 -129289342 - MER106B DNA MER1_type -910 149 1 344 327 10 0 chr2 123967309 123967410 -129289173 + L2 LINE L2 3210 3311 -2 231 278 166 13 chr2 123969212 123969363 -129287220 + MIR3 SINE MIR 16 189 -19 722 129 0 0 chr2 123969683 123969784 -129286799 - FRAM SINE Alu -75 101 1 2415 89 7 0 chr2 123970071 123970375 -129286208 - AluSq SINE Alu -7 306 1 1770 73 166 15 chr2 123971242 123971501 -129285082 + AluSg1 SINE Alu 1 298 -11 1866 161 3 16 chr2 123972059 123972364 -129284219 + AluJo SINE Alu 1 301 -11 180 0 0 0 chr2 123973569 123973589 -129282994 + (T)n Simple_repeat Simple_repeat 1 20 0 2355 106 0 3 chr2 123974530 123974841 -129281742 + AluSx SINE Alu 1 310 -2 254 331 38 8 chr2 123974974 123975107 -129281476 - MIR SINE MIR -40 222 86 712 237 58 40 chr2 123975797 123976021 -129280562 - MLT1K LTR MaLR -33 555 328 1941 150 29 49 chr2 123976302 123976397 -129280186 + MER2 DNA MER2_type 2 97 -248 1839 154 7 13 chr2 123976397 123976696 -129279887 + AluJo SINE Alu 5 301 -11 1941 150 29 49 chr2 123976696 123976946 -129279637 + MER2 DNA MER2_type 97 340 -5 29 60 0 0 chr2 123977899 123977949 -129278634 + AT_rich Low_complexity Low_complexity 1 50 0 1242 261 68 26 chr2 123978103 123978321 -129278262 - L1ME3A LINE L1 -213 5957 5750 216 0 0 0 chr2 123978321 123978345 -129278238 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1242 261 68 26 chr2 123978345 123978594 -129277989 - L1ME3A LINE L1 -420 5750 5470 428 286 128 40 chr2 123979451 123979724 -129276859 - L2 LINE L2 0 3272 2976 448 223 36 18 chr2 123979767 123979879 -129276704 + MER97a DNA MER1_type? 70 183 -711 301 148 0 0 chr2 123980396 123980450 -129276133 - L1MB4 LINE L1 -2 6178 6125 4769 128 36 12 chr2 123980484 123981239 -129275344 - L1MC1 LINE L1 0 6613 5841 9383 129 89 34 chr2 123981247 123981849 -129274734 - L1MC1 LINE L1 -3947 2479 1912 3935 62 0 2 chr2 123981849 123982320 -129274263 - L1PA10 LINE L1 0 6168 5699 9383 129 89 34 chr2 123982320 123982649 -129273934 - L1MC1 LINE L1 -4514 1912 1603 2052 90 60 0 chr2 123982649 123982940 -129273643 - AluY SINE Alu 0 307 1 9383 129 89 34 chr2 123982940 123983816 -129272767 - L1MC1 LINE L1 -4823 1603 570 375 196 130 0 chr2 123983895 123983987 -129272596 - L1MB7 LINE L1 -10 6174 6071 1718 136 23 7 chr2 123984120 123984422 -129272161 - L1MB7 LINE L1 -344 5834 5528 658 113 0 31 chr2 123984423 123984520 -129272063 + AluJ SINE Alu 55 148 -164 2244 114 3 0 chr2 123984549 123984855 -129271728 - AluSq SINE Alu -6 307 1 1949 149 0 26 chr2 123984864 123985173 -129271410 - AluSx SINE Alu -11 301 1 918 118 16 0 chr2 123986980 123987107 -129269476 + AluJ SINE Alu 152 280 -32 207 186 0 0 chr2 123988106 123988149 -129268434 + (CA)n Simple_repeat Simple_repeat 1 43 0 25 31 0 0 chr2 123988236 123988268 -129268315 + AT_rich Low_complexity Low_complexity 1 32 0 1558 181 15 0 chr2 123988917 123989183 -129267400 + L1MB3 LINE L1 5904 6173 -10 1873 136 3 24 chr2 123989607 123989901 -129266682 - L1PA13 LINE L1 -2 6161 5874 1103 172 166 25 chr2 123990451 123990770 -129265813 - MLT1A2 LTR MaLR -8 366 3 776 231 171 0 chr2 123990949 123991148 -129265435 + MIR SINE MIR 5 237 -25 959 240 152 68 chr2 123991252 123991764 -129264819 - MLT1G1 LTR MaLR 0 555 1 195 42 0 0 chr2 123992710 123992734 -129263849 + (TA)n Simple_repeat Simple_repeat 2 25 0 242 263 75 65 chr2 123994731 123994917 -129261666 + L1MEd LINE L1 830 1017 -5102 241 125 50 0 chr2 124045830 124045870 -129210713 + LTR33 LTR ERVL 480 521 0 928 158 25 0 chr2 124046105 124046263 -129210320 + FRAM SINE Alu 1 162 -4 203 366 113 38 chr2 124046286 124046499 -129210084 - MIR SINE MIR -14 248 20 381 243 223 7 chr2 124047599 124047747 -129208836 - MIR SINE MIR -16 246 67 2258 173 8 18 chr2 124047747 124048141 -129208442 + MLT1B LTR MaLR 1 390 0 393 271 15 8 chr2 124048230 124048363 -129208220 - L1MC5 LINE L1 -104 7857 7724 1148 70 0 13 chr2 124049143 124049301 -129207282 + AluSg/x SINE Alu 124 279 -33 225 0 0 0 chr2 124049301 124049326 -129207257 + (CA)n Simple_repeat Simple_repeat 1 25 0 222 37 0 0 chr2 124049388 124049415 -129207168 + (CA)n Simple_repeat Simple_repeat 1 27 0 183 42 0 0 chr2 124049434 124049458 -129207125 + (CA)n Simple_repeat Simple_repeat 2 25 0 270 0 0 0 chr2 124049476 124049506 -129207077 + (CA)n Simple_repeat Simple_repeat 1 30 0 469 169 0 0 chr2 124049807 124049884 -129206699 + MER58A DNA MER1_type 22 98 -9 313 219 42 73 chr2 124049890 124049986 -129206597 + MIR SINE MIR 34 126 -136 900 238 50 84 chr2 124050093 124050283 -129206300 + L1MC5 LINE L1 7405 7600 -361 1983 121 4 0 chr2 124050283 124050595 -129205988 + AluSx SINE Alu 1 313 0 900 238 50 84 chr2 124050595 124050962 -129205621 + L1MC5 LINE L1 7600 7944 -17 4298 146 37 73 chr2 124050973 124051456 -129205127 + L1MB5 LINE L1 5138 5637 -537 725 164 33 8 chr2 124051456 124051578 -129205005 + FLAM_A SINE Alu 1 125 -8 4298 146 37 73 chr2 124051578 124052174 -129204409 + L1MB5 LINE L1 5637 6174 0 2163 118 0 0 chr2 124053455 124053752 -129202831 - AluSx SINE Alu -14 298 2 441 322 67 21 chr2 124053775 124054106 -129202477 - L2 LINE L2 -203 3110 2764 1306 258 142 86 chr2 124054111 124055220 -129201363 - L2 LINE L2 -1404 1910 740 2432 183 24 41 chr2 124055220 124055729 -129200854 + MER74B LTR ERVL 56 555 -67 566 300 176 16 chr2 124055790 124056153 -129200430 - L2 LINE L2 -2691 623 203 2005 203 74 34 chr2 124056562 124056622 -129199961 - MLT2B1 LTR ERVL 0 520 464 225 65 0 0 chr2 124056622 124056653 -129199930 + (TG)n Simple_repeat Simple_repeat 1 31 0 2005 203 74 34 chr2 124056653 124057090 -129199493 - MLT2B1 LTR ERVL -56 464 3 1634 136 68 4 chr2 124057226 124057381 -129199202 - AluJb SINE Alu -15 297 153 201 74 0 0 chr2 124057381 124057408 -129199175 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1634 136 68 4 chr2 124057408 124057531 -129199052 - AluJb SINE Alu -159 153 1 438 275 30 65 chr2 124058208 124058408 -129198175 - L1MC4 LINE L1 -1073 6969 6777 264 191 28 135 chr2 124058408 124058549 -129198034 - L1MC4a LINE L1 -1081 6727 6602 2126 126 0 3 chr2 124058551 124058861 -129197722 - AluSg SINE Alu -1 309 1 318 312 247 0 chr2 124059662 124059832 -129196751 - MIR SINE MIR -11 251 40 1864 155 124 16 chr2 124060087 124060580 -129196003 - MER51A LTR ERV1 0 634 1 30 0 0 0 chr2 124060659 124060689 -129195894 + AT_rich Low_complexity Low_complexity 1 30 0 517 206 55 48 chr2 124062282 124062428 -129194155 + L2 LINE L2 3149 3295 -18 215 174 0 22 chr2 124062661 124062707 -129193876 - L2 LINE L2 -109 3204 3160 181 254 127 28 chr2 124062740 124062811 -129193772 - L2 LINE L2 -17 3255 3178 424 188 0 0 chr2 124063199 124063268 -129193315 + Tigger2 DNA MER2_type 1 69 -2649 * 2490 132 87 2 chr2 124063266 124063669 -129192914 + Tigger2 DNA MER2_type 2280 2716 -2 1798 131 18 0 chr2 124064630 124064925 -129191658 + AluSx SINE Alu 2 301 0 2032 98 0 11 chr2 124066708 124066993 -129189590 + AluSc SINE Alu 24 305 -4 294 152 0 0 chr2 124068361 124068407 -129188176 - AluJb SINE Alu -10 292 247 723 179 4 1 chr2 124068416 124068563 -129188020 + L1ME LINE L1 5662 5811 -359 1097 206 21 0 chr2 124068589 124068827 -129187756 - AluJb SINE Alu -66 246 4 645 253 34 61 chr2 124069363 124069659 -129186924 - L1MC4 LINE L1 -64 7978 7691 28 29 0 0 chr2 124069666 124069701 -129186882 + AT_rich Low_complexity Low_complexity 1 35 0 725 178 8 0 chr2 124069703 124069821 -129186762 - AluSq/x SINE Alu -193 120 2 355 253 0 24 chr2 124069862 124069945 -129186638 - L1MC4 LINE L1 -369 7673 7593 4111 174 25 10 chr2 124070036 124070805 -129185778 - L1MB7 LINE L1 -15 6169 5390 2146 151 17 66 chr2 124071854 124072264 -129184319 - MLT1B LTR MaLR 0 390 1 1014 46 15 0 chr2 124073840 124073971 -129182612 + AluY SINE Alu 169 301 -10 297 298 83 16 chr2 124074619 124074740 -129181843 + MIR SINE MIR 17 145 -63 1708 132 17 24 chr2 124074779 124075067 -129181516 - THE1C LTR MaLR -2 373 88 633 94 24 0 chr2 124075172 124075257 -129181326 - THE1C LTR MaLR -288 87 1 390 125 0 16 chr2 124075257 124075321 -129181262 - THE1C-int LTR MaLR 0 1580 1518 474 83 0 0 chr2 124075336 124075396 -129181187 - THE1C LTR MaLR -315 60 1 11133 99 14 29 chr2 124075396 124076999 -129179584 - THE1C-int LTR MaLR 0 1580 2 2444 116 11 19 chr2 124077000 124077378 -129179205 - THE1C LTR MaLR 0 375 1 1823 125 11 0 chr2 124078417 124078697 -129177886 - L1MB7 LINE L1 -8 6176 5894 790 138 0 0 chr2 124078714 124078837 -129177746 - L1MA6 LINE L1 -4 6296 6174 1036 161 26 0 chr2 124078837 124079030 -129177553 - L1MB7 LINE L1 -277 5907 5710 706 248 35 5 chr2 124079582 124079780 -129176803 + MIR SINE MIR 13 216 -46 538 310 103 40 chr2 124080225 124080914 -129175669 + L2 LINE L2 2505 3311 -2 33061 103 12 57 chr2 124080928 124083576 -129173007 + L1PA7 LINE L1 12 2778 -3376 2277 101 7 0 chr2 124083576 124083872 -129172711 + AluSp SINE Alu 1 298 -15 33061 103 12 57 chr2 124083872 124087665 -129168918 + L1PA7 LINE L1 2778 6154 0 1736 212 145 2 chr2 124088580 124088986 -129167597 - MLT1D LTR MaLR -38 467 4 1675 161 29 14 chr2 124089297 124089577 -129167006 + AluJo SINE Alu 18 301 -11 243 0 0 0 chr2 124090147 124090174 -129166409 + (TA)n Simple_repeat Simple_repeat 2 28 0 360 0 0 0 chr2 124090920 124090960 -129165623 + (TG)n Simple_repeat Simple_repeat 2 41 0 369 241 93 62 chr2 124091060 124091222 -129165361 - MIR SINE MIR -22 240 74 21 0 0 0 chr2 124091670 124091691 -129164892 + AT_rich Low_complexity Low_complexity 1 21 0 277 155 52 0 chr2 124091691 124091749 -129164834 + HsTC2 DNA Tc2 1 61 -1837 572 282 107 36 chr2 124091874 124092211 -129164372 - LTR16A LTR ERVL -31 419 59 5115 242 53 19 chr2 124093761 124094016 -129162567 + L1M4 LINE L1 2877 3122 -3024 2155 116 3 7 chr2 124094016 124094308 -129162275 + AluSx SINE Alu 1 291 -21 5115 242 53 19 chr2 124094308 124095649 -129160934 + L1M4 LINE L1 3122 4528 -1618 1993 204 39 28 chr2 124095626 124096160 -129160423 + L1M4 LINE L1 4785 5324 -822 * 1962 153 27 22 chr2 124096129 124096585 -129159998 + L1MB1 LINE L1 5174 5631 -537 * 1017 158 0 0 chr2 124096586 124096766 -129159817 + FRAM SINE Alu 1 180 0 2884 169 24 11 chr2 124096767 124096817 -129159766 + L1MB1 LINE L1 5619 5667 -501 1785 187 27 0 chr2 124096817 124097116 -129159467 + AluJo SINE Alu 1 307 -5 2884 169 24 11 chr2 124097116 124097604 -129158979 + L1MB1 LINE L1 5667 6164 -4 1392 184 201 19 chr2 124097620 124097994 -129158589 + L1ME1 LINE L1 5272 5713 -631 552 248 43 96 chr2 124098019 124098322 -129158261 + L1ME1 LINE L1 5873 6159 -7 495 278 38 42 chr2 124099154 124099417 -129157166 + HAL1 LINE L1 2246 2507 0 326 83 0 0 chr2 124102801 124102849 -129153734 + Alu SINE Alu 258 305 -3 304 272 61 26 chr2 124103473 124103587 -129152996 + MIR3 SINE MIR 85 202 -6 1945 128 53 113 chr2 124104949 124105159 -129151424 - MLT1A1 LTR MaLR 0 365 144 1816 176 7 7 chr2 124105159 124105466 -129151117 - AluJo SINE Alu -5 307 1 1945 128 53 113 chr2 124105466 124105598 -129150985 - MLT1A1 LTR MaLR -221 144 57 854 127 0 0 chr2 124105598 124105716 -129150867 - FLAM_C SINE Alu -15 118 1 1945 128 53 113 chr2 124105716 124105770 -129150813 - MLT1A1 LTR MaLR -308 57 1 2292 87 3 3 chr2 124106182 124106469 -129150114 - AluSx SINE Alu -25 287 1 2011 139 3 10 chr2 124106507 124106809 -129149774 + AluSq SINE Alu 13 312 -1 1190 239 79 83 chr2 124107152 124108184 -129148399 - L1MC4 LINE L1 -1188 6620 5814 2817 102 26 9 chr2 124108855 124109276 -129147307 - MSTA LTR MaLR 0 428 1 195 42 0 0 chr2 124110580 124110604 -129145979 + (CCA)n Simple_repeat Simple_repeat 3 26 0 536 268 19 0 chr2 124110617 124110774 -129145809 + MIR SINE MIR 88 247 -15 432 215 0 0 chr2 124111819 124111898 -129144685 + Tigger5 DNA MER2_type 1 79 -2244 443 197 0 0 chr2 124111900 124111976 -129144607 - Tigger5 DNA MER2_type -6 2317 2242 * 506 175 0 0 chr2 124111966 124112046 -129144537 + Tigger5 DNA MER2_type 2242 2321 -2 1524 260 82 2 chr2 124112098 124112498 -129144085 - MER70B LTR ERVL -143 435 4 316 178 55 0 chr2 124113130 124113203 -129143380 + MIR SINE MIR 116 192 -70 339 229 195 0 chr2 124113230 124113348 -129143235 - MIR SINE MIR -1 261 121 234 196 22 0 chr2 124113372 124113418 -129143165 + L2 LINE L2 3210 3256 -16 403 181 32 58 chr2 124113604 124113736 -129142847 + MLT1J LTR MaLR 1 177 -308 841 198 108 52 chr2 124113875 124114087 -129142496 + MER58A DNA MER1_type 1 224 0 942 219 5 5 chr2 124114135 124114350 -129142233 - L1M4 LINE L1 -3257 2889 2675 401 276 80 49 chr2 124114987 124115212 -129141371 + MIR SINE MIR 21 252 -10 234 164 36 0 chr2 124115289 124115344 -129141239 + L1M LINE L1 5373 5429 -2379 32 57 0 0 chr2 124115455 124115508 -129141075 + AT_rich Low_complexity Low_complexity 1 53 0 209 151 19 0 chr2 124115563 124115616 -129140967 + (TA)n Simple_repeat Simple_repeat 2 55 0 22 35 0 0 chr2 124115654 124115683 -129140900 + AT_rich Low_complexity Low_complexity 1 29 0 2287 103 3 0 chr2 124115726 124116026 -129140557 + AluSq SINE Alu 3 303 -10 494 289 117 37 chr2 124116155 124116564 -129140019 - L1ME LINE L1 -332 5789 5348 249 108 0 0 chr2 124116879 124116916 -129139667 + (TTAA)n Simple_repeat Simple_repeat 4 40 0 25 31 0 0 chr2 124119239 124119271 -129137312 + AT_rich Low_complexity Low_complexity 1 32 0 344 242 217 12 chr2 124119910 124120071 -129136512 + MIR SINE MIR 51 244 -18 5533 195 116 74 chr2 124120131 124121240 -129135343 - L1MC4a LINE L1 0 7808 6747 258 32 0 0 chr2 124121240 124121271 -129135312 + (CA)n Simple_repeat Simple_repeat 2 32 0 5533 195 116 74 chr2 124121271 124121324 -129135259 - L1MC4a LINE L1 -1061 6747 6698 2096 140 0 31 chr2 124121324 124121646 -129134937 + AluJb SINE Alu 1 312 0 5533 195 116 74 chr2 124121646 124122233 -129134350 - L1MC4a LINE L1 -1110 6698 5984 219 276 0 35 chr2 124122295 124122382 -129134201 + L2 LINE L2 2873 2956 -316 2311 105 0 0 chr2 124123296 124123592 -129132991 - AluSx SINE Alu -16 296 1 212 267 57 19 chr2 124123654 124123759 -129132824 - MIR SINE MIR -63 199 91 565 204 0 0 chr2 124123816 124123919 -129132664 + AluJb SINE Alu 135 237 -75 351 247 0 0 chr2 124124170 124124247 -129132336 + L2 LINE L2 3186 3262 -10 1838 149 29 0 chr2 124124247 124124523 -129132060 + AluJb SINE Alu 1 284 -28 1890 163 0 10 chr2 124124536 124124825 -129131758 + AluJb SINE Alu 1 286 -26 287 233 139 39 chr2 124125070 124125199 -129131384 + MIR SINE MIR 121 262 0 1711 163 10 21 chr2 124125386 124125674 -129130909 + AluJo SINE Alu 1 285 -27 333 0 0 0 chr2 124125674 124125711 -129130872 + (CA)n Simple_repeat Simple_repeat 2 38 0 324 102 0 0 chr2 124126741 124126790 -129129793 + (CA)n Simple_repeat Simple_repeat 2 50 0 12458 96 17 12 chr2 124127066 124128720 -129127863 + L1PA8A LINE L1 2420 4065 -2066 2323 119 3 3 chr2 124128720 124129032 -129127551 + AluSp SINE Alu 1 312 -1 12458 96 17 12 chr2 124129032 124131071 -129125512 + L1PA8A LINE L1 4065 6131 0 273 29 0 0 chr2 124132285 124132319 -129124264 + (CA)n Simple_repeat Simple_repeat 1 34 0 728 271 45 12 chr2 124132595 124132839 -129123744 - MIR SINE MIR -10 252 1 492 296 82 9 chr2 124133118 124133338 -129123245 + MIR SINE MIR 21 256 -6 231 204 0 0 chr2 124133633 124133682 -129122901 + T-rich Low_complexity Low_complexity 1 49 0 1281 170 13 13 chr2 124133691 124133920 -129122663 - AluJb SINE Alu -83 229 1 1612 230 112 47 chr2 124134006 124134393 -129122190 + MLT1E LTR MaLR 1 436 -157 2109 120 67 22 chr2 124134393 124134752 -129121831 - THE1C LTR MaLR 0 375 1 1612 230 112 47 chr2 124134752 124134920 -129121663 + MLT1E LTR MaLR 436 592 -1 278 302 97 26 chr2 124134924 124135235 -129121348 + L1ME LINE L1 5545 5877 -244 1729 180 64 3 chr2 124135396 124135724 -129120859 - MER7A DNA MER2_type 0 346 1 1390 234 134 5 chr2 124135858 124136268 -129120315 + LTR16B LTR ERVL 1 463 -1 327 302 6 89 chr2 124136324 124136503 -129120080 - L2 LINE L2 -98 3174 3011 784 225 201 5 chr2 124136533 124136742 -129119841 - MIR SINE MIR 0 262 13 340 158 50 16 chr2 124136821 124136917 -129119666 - LTR50 LTR ERVL -5 787 676 2759 90 80 8 chr2 124137111 124137510 -129119073 + MSTA LTR MaLR 1 428 0 746 198 115 16 chr2 124138222 124138414 -129118169 + MIR SINE MIR 28 238 -24 2489 88 10 0 chr2 124139742 124140049 -129116534 + AluSx SINE Alu 1 310 -2 185 338 70 32 chr2 124140516 124140673 -129115910 + MER5A DNA MER1_type 26 188 -1 418 118 54 35 chr2 124140846 124141163 -129115420 + (CA)n Simple_repeat Simple_repeat 1 323 0 203 105 79 13 chr2 124141215 124141291 -129115292 + (CA)n Simple_repeat Simple_repeat 1 81 0 320 99 37 12 chr2 124141331 124141412 -129115171 + (CA)n Simple_repeat Simple_repeat 1 83 0 325 183 115 48 chr2 124141636 124141740 -129114843 + MLT1I LTR MaLR 72 182 -227 341 239 104 0 chr2 124141778 124141912 -129114671 + MLT1I LTR MaLR 253 400 -9 193 278 67 98 chr2 124142375 124142569 -129114014 + L2 LINE L2 3067 3254 -18 247 203 0 62 chr2 124142653 124142717 -129113866 - L2 LINE L2 -8 3264 3205 180 291 18 0 chr2 124142892 124142947 -129113636 + MIR SINE MIR 47 102 -106 1105 248 149 20 chr2 124143478 124143929 -129112654 - L2 LINE L2 -1 3312 2804 1782 156 50 0 chr2 124144322 124144604 -129111979 + AluSx SINE Alu 1 296 -16 276 217 0 50 chr2 124144610 124144670 -129111913 + L2 LINE L2 2910 2966 -306 2630 147 108 16 chr2 124144812 124145498 -129111085 - LTR48 LTR ERV1 -14 773 1 2302 105 0 0 chr2 124145758 124146054 -129110529 + AluSx SINE Alu 1 296 -16 1891 132 32 40 chr2 124146150 124146435 -129110148 - THE1C LTR MaLR 0 375 92 1636 133 174 7 chr2 124146435 124146729 -129109854 - MER61A LTR ERV1 0 343 1 1891 132 32 40 chr2 124146729 124146821 -129109762 - THE1C LTR MaLR -283 92 1 404 269 119 52 chr2 124147511 124147704 -129108879 - MIR SINE MIR -37 225 20 3045 155 60 77 chr2 124148653 124149356 -129107227 - LTR8 LTR ERV1 0 691 1 365 302 95 11 chr2 124150439 124150628 -129105955 + L1ME4a LINE L1 5667 5871 -250 448 282 79 10 chr2 124150628 124150824 -129105759 + LTR33 LTR ERVL 6 190 -333 613 222 83 17 chr2 124150862 124151042 -129105541 + LTR33 LTR ERVL 330 521 0 2059 95 66 0 chr2 124151355 124151629 -129104954 + AluSc SINE Alu 1 292 -17 184 263 113 75 chr2 124151764 124151844 -129104739 + MIR3 SINE MIR 13 95 -113 * 307 288 34 17 chr2 124151826 124151944 -129104639 + MIR SINE MIR 107 226 -36 1659 189 67 120 chr2 124152222 124152656 -129103927 - MLT1E LTR MaLR -11 582 189 324 0 0 0 chr2 124152656 124152692 -129103891 + (TG)n Simple_repeat Simple_repeat 2 37 0 1659 189 67 120 chr2 124152692 124152872 -129103711 - MLT1E LTR MaLR -404 189 1 315 19 58 0 chr2 124153021 124153073 -129103510 + (TA)n Simple_repeat Simple_repeat 2 56 0 2207 93 3 7 chr2 124153073 124153362 -129103221 - AluSx SINE Alu -24 288 1 610 272 84 47 chr2 124153675 124153923 -129102660 - MLT1J LTR MaLR -24 487 213 1855 100 85 4 chr2 124153923 124154225 -129102358 - AluSg SINE Alu 0 323 1 610 272 84 47 chr2 124154225 124154431 -129102152 - MLT1J LTR MaLR -298 213 16 205 350 136 0 chr2 124154461 124154564 -129102019 - L3 LINE CR1 -1441 136 20 607 278 126 30 chr2 124154784 124155259 -129101324 + LTR33A LTR ERVL 3 523 0 708 211 78 94 chr2 124155264 124155647 -129100936 - L1MC5 LINE L1 -83 7878 7502 411 56 0 0 chr2 124155672 124155726 -129100857 + (CA)n Simple_repeat Simple_repeat 1 54 0 380 300 2 2 chr2 124156051 124156157 -129100426 - MIR SINE MIR -63 145 56 921 146 0 0 chr2 124156430 124156560 -129100023 + FLAM_C SINE Alu 1 130 -13 2195 88 3 18 chr2 124156576 124156888 -129099695 + AluY SINE Alu 1 308 0 1339 150 22 0 chr2 124156976 124157203 -129099380 + L1MB5 LINE L1 5943 6174 0 2395 73 3 7 chr2 124157644 124157946 -129098637 - AluY SINE Alu -10 301 1 320 260 244 0 chr2 124158380 124158507 -129098076 + MIR SINE MIR 91 248 -14 1889 162 21 44 chr2 124159360 124159743 -129096840 + MLT1B LTR MaLR 1 374 -16 465 136 0 49 chr2 124159747 124159828 -129096755 + MER97a DNA MER1_type? 103 179 -715 2361 90 7 0 chr2 124160105 124160404 -129096179 - AluSp SINE Alu -12 301 1 1598 201 20 0 chr2 124160594 124160887 -129095696 + AluJo SINE Alu 1 299 -13 230 333 83 11 chr2 124160987 124161167 -129095416 - L2 LINE L2 -378 2936 2744 1784 176 7 17 chr2 124162137 124162439 -129094144 + AluJo SINE Alu 1 299 -13 225 303 72 72 chr2 124162520 124162771 -129093812 + L2 LINE L2 2970 3220 -52 250 309 149 15 chr2 124163047 124163248 -129093335 - L2 LINE L2 -54 3259 3032 459 99 0 28 chr2 124164197 124164268 -129092315 - MER45 DNA AcHobo 0 1581 1513 820 141 0 0 chr2 124164272 124164393 -129092190 + AluSg/x SINE Alu 190 310 -2 320 209 0 0 chr2 124164425 124164492 -129092091 - MER45 DNA AcHobo -886 67 1 2426 83 0 35 chr2 124164641 124164955 -129091628 - AluSx SINE Alu -9 303 1 568 212 185 0 chr2 124165948 124166099 -129090484 - MER5A DNA MER1_type -2 187 9 538 227 87 58 chr2 124166104 124166311 -129090272 - L1ME3A LINE L1 -23 6147 5935 245 118 0 0 chr2 124166311 124166345 -129090238 - U2 snRNA snRNA -153 35 2 654 268 144 20 chr2 124166457 124166763 -129089820 + MLT1L LTR MaLR 117 460 -155 * 1133 151 50 91 chr2 124166746 124166844 -129089739 - MER96B DNA MER1_type? -7 410 309 1725 181 0 10 chr2 124166844 124167132 -129089451 - AluJo SINE Alu -27 285 1 1133 151 50 91 chr2 124167132 124167315 -129089268 - MER96B DNA MER1_type? -108 309 147 2395 76 17 0 chr2 124167315 124167606 -129088977 - AluSp SINE Alu -17 296 1 1133 151 50 91 chr2 124167606 124167707 -129088876 - MER96B DNA MER1_type? -270 147 43 427 219 48 0 chr2 124167739 124167844 -129088739 + MLT1L LTR MaLR 493 602 -13 237 217 50 0 chr2 124167869 124167929 -129088654 - MLT1K LTR MaLR -24 564 502 1465 267 82 60 chr2 124168028 124168746 -129087837 + MER21B LTR ERV1 6 739 -124 1553 196 16 19 chr2 124169132 124169443 -129087140 + AluJo SINE Alu 1 310 -2 290 248 152 116 chr2 124169522 124169720 -129086863 + MIR SINE MIR 46 250 -12 259 310 0 0 chr2 124169812 124169870 -129086713 + L2 LINE L2 3254 3311 -2 659 286 24 0 chr2 124170806 124170989 -129085594 - MIR3 SINE MIR -11 197 8 332 298 184 0 chr2 124171559 124171700 -129084883 + MIR SINE MIR 65 231 -31 588 225 0 0 chr2 124172499 124172610 -129083973 + MER81 DNA DNA 1 111 -3 531 247 111 21 chr2 124172951 124173141 -129083442 + MIR SINE MIR 46 252 -10 1231 239 66 11 chr2 124173266 124173630 -129082953 + L1ME4a LINE L1 5485 5868 -253 404 231 58 102 chr2 124173711 124173904 -129082679 - L1ME3A LINE L1 -199 5922 5753 2246 91 27 7 chr2 124173904 124174201 -129082382 + AluSx SINE Alu 1 303 -9 404 231 58 102 chr2 124174201 124174401 -129082182 - L1ME3A LINE L1 -368 5753 5546 1016 278 37 41 chr2 124174527 124175016 -129081567 + MER69 DNA AcHobo 855 1341 -1185 651 159 138 20 chr2 124174993 124175188 -129081395 + MER69 DNA AcHobo 1679 1896 -630 * 932 219 65 8 chr2 124175275 124175535 -129081048 + MER69 DNA AcHobo 2249 2523 -3 1822 130 13 62 chr2 124175760 124176067 -129080516 + AluJo SINE Alu 1 292 -20 195 175 0 50 chr2 124176073 124176113 -129080470 - L2 LINE L2 -14 3299 3262 708 157 60 38 chr2 124176652 124176837 -129079746 - MER53 DNA DNA 0 189 1 338 194 15 0 chr2 124177615 124177682 -129078901 - MER5A DNA MER1_type -80 109 42 1557 226 118 55 chr2 124178273 124178463 -129078120 + MLT1E2 LTR MaLR 2 179 -447 2034 106 24 3 chr2 124178463 124178756 -129077827 + AluSx SINE Alu 1 299 -13 1557 226 118 55 chr2 124178756 124179150 -129077433 + MLT1E2 LTR MaLR 179 623 -3 338 272 0 12 chr2 124179570 124179651 -129076932 - MIR3 SINE MIR -3 205 126 249 263 29 117 chr2 124181731 124181868 -129074715 + MIR SINE MIR 79 203 -59 528 234 7 7 chr2 124182430 124182567 -129074016 - L1ME3A LINE L1 -1088 5058 4922 246 281 37 12 chr2 124182872 124182954 -129073629 + LTR67 LTR ERVL 457 540 -17 226 256 12 61 chr2 124183352 124183434 -129073149 - MIR3 SINE MIR -1 207 130 266 336 19 0 chr2 124183434 124183541 -129073042 - MIR3 SINE MIR -43 165 57 339 273 34 23 chr2 124184630 124184718 -129071865 + MER5B DNA MER1_type 90 178 0 2333 56 3 7 chr2 124185556 124185844 -129070739 + AluY SINE Alu 1 287 -24 234 245 57 0 chr2 124186211 124186264 -129070319 - MIR SINE MIR -88 174 119 257 254 48 0 chr2 124186359 124186422 -129070161 - MIR SINE MIR -88 174 109 * 522 228 88 47 chr2 124186414 124186629 -129069954 + MIR SINE MIR 39 262 0 2345 94 3 7 chr2 124187362 124187661 -129068922 + AluSx SINE Alu 1 298 -14 472 250 55 8 chr2 124187695 124187823 -129068760 - MIR SINE MIR -43 219 86 374 327 26 6 chr2 124188098 124188254 -129068329 - MLT1L LTR MaLR -347 268 110 1654 163 0 27 chr2 124188509 124188803 -129067780 - AluJb SINE Alu -26 286 1 454 332 146 44 chr2 124188848 124189405 -129067178 + L2 LINE L2 1721 2219 -1095 1264 207 69 0 chr2 124189405 124189680 -129066903 - AluJo SINE Alu -18 294 1 454 332 146 44 chr2 124189680 124190058 -129066525 + L2 LINE L2 2219 2752 -562 325 239 142 0 chr2 124190344 124190457 -129066126 + MIR SINE MIR 122 250 -12 795 292 38 13 chr2 124190457 124190693 -129065890 - MIR SINE MIR -1 261 20 2209 117 0 0 chr2 124190697 124190995 -129065588 - AluSx SINE Alu -14 298 1 352 290 40 0 chr2 124191719 124191819 -129064764 + L2 LINE L2 3144 3247 -25 268 234 297 23 chr2 124192637 124192765 -129063818 - MIR SINE MIR -28 234 72 227 289 0 0 chr2 124192863 124192946 -129063637 + MIR SINE MIR 171 253 -9 1160 256 41 57 chr2 124193633 124194121 -129062462 + MLT1J LTR MaLR 1 480 -31 239 170 0 19 chr2 124194750 124194803 -129061780 + GA-rich Low_complexity Low_complexity 3 54 0 265 273 8 47 chr2 124194920 124194991 -129061592 + (CATATA)n Simple_repeat Simple_repeat 6 71 -57 2105 186 142 25 chr2 124194991 124195476 -129061107 + MLT1F LTR MaLR 1 542 0 265 273 8 47 chr2 124195476 124195532 -129061051 + (CATATA)n Simple_repeat Simple_repeat 71 128 0 435 266 81 16 chr2 124195576 124195700 -129060883 - MIR SINE MIR -94 168 37 427 242 154 42 chr2 124195730 124195774 -129060809 - L1ME4a LINE L1 -120 6001 5963 1899 154 58 9 chr2 124195774 124196104 -129060479 - L1MC2 LINE L1 -1 6343 5998 427 242 154 42 chr2 124196104 124196299 -129060284 - L1ME4a LINE L1 -158 5963 5735 270 56 0 0 chr2 124197078 124197114 -129059469 + (TC)n Simple_repeat Simple_repeat 2 37 0 2375 75 3 3 chr2 124197148 124197443 -129059140 + AluY SINE Alu 1 295 -16 851 155 250 30 chr2 124199658 124199922 -129056661 + MER5C DNA MER1_type 1 322 -2 352 238 5 150 chr2 124199988 124200181 -129056402 - MER5B DNA MER1_type -9 169 5 242 333 41 32 chr2 124200764 124200887 -129055696 - L2 LINE L2 0 3272 3149 925 247 12 27 chr2 124200950 124201209 -129055374 + MER112 DNA MER1_type 1 255 -1 193 208 21 0 chr2 124201235 124201283 -129055300 + L2 LINE L2 3264 3312 -1 2189 167 100 12 chr2 124201651 124202081 -129054502 + MLT1D LTR MaLR 10 477 -28 1996 102 9 74 chr2 124202097 124202422 -129054161 - AluSx SINE Alu -8 304 1 259 111 0 0 chr2 124202422 124202458 -129054125 + MLT1D LTR MaLR 462 497 -8 285 75 0 0 chr2 124202564 124202604 -129053979 + (TG)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr2 124202639 124202660 -129053923 + AT_rich Low_complexity Low_complexity 1 21 0 779 262 29 0 chr2 124202885 124203091 -129053492 + L1MB5 LINE L1 5570 5781 -340 912 130 0 36 chr2 124204979 124205117 -129051466 + FLAM_C SINE Alu 1 133 0 304 242 232 0 chr2 124205120 124205219 -129051364 + MER5A DNA MER1_type 61 182 -7 709 184 9 0 chr2 124205497 124205611 -129050972 + FLAM_A SINE Alu 11 125 -17 249 86 0 0 chr2 124205613 124205648 -129050935 + L1MB5 LINE L1 5902 5936 -238 217 341 47 47 chr2 124205649 124205863 -129050720 - L2 LINE L2 -230 3042 2829 318 153 0 0 chr2 124206846 124206905 -129049678 + GA-rich Low_complexity Low_complexity 1 59 0 219 36 0 0 chr2 124207556 124207584 -129048999 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 189 0 0 0 chr2 124207759 124207780 -129048803 + (T)n Simple_repeat Simple_repeat 1 21 0 189 0 0 0 chr2 124207896 124207917 -129048666 + (A)n Simple_repeat Simple_repeat 1 21 0 337 263 134 64 chr2 124210428 124210599 -129045984 - MIR SINE MIR -10 252 70 282 105 0 0 chr2 124210630 124210668 -129045915 + MER3 DNA MER1_type 6 43 -166 870 204 34 0 chr2 124210705 124210881 -129045702 + MER3 DNA MER1_type 28 209 0 420 263 50 50 chr2 124210897 124211057 -129045526 + MIR3 SINE MIR 40 199 -9 325 293 79 40 chr2 124212617 124212874 -129043709 - L2 LINE L2 -40 3232 2890 207 204 0 0 chr2 124212927 124212976 -129043607 + (TG)n Simple_repeat Simple_repeat 2 50 0 549 99 0 0 chr2 124213454 124213535 -129043048 + (TG)n Simple_repeat Simple_repeat 1 81 0 246 267 82 97 chr2 124213627 124213822 -129042761 - L2 LINE L2 -568 2746 2555 184 275 0 0 chr2 124213953 124213993 -129042590 - L2 LINE L2 -20 3252 3213 257 214 0 43 chr2 124214022 124214092 -129042491 - L1MC4 LINE L1 -5 8037 7971 3754 230 98 35 chr2 124214365 124215687 -129040896 - L1MC4 LINE L1 -122 7686 6442 342 221 0 0 chr2 124217125 124217193 -129039390 - L2 LINE L2 -19 3253 3186 389 255 172 43 chr2 124217424 124217749 -129038834 - L1MC4a LINE L1 -1666 6142 5776 1160 68 0 0 chr2 124217903 124218049 -129038534 - AluSg/x SINE Alu -11 301 156 491 269 79 76 chr2 124218092 124218382 -129038201 + MLT1H1 LTR MaLR 215 505 -50 222 323 171 19 chr2 124218849 124219007 -129037576 + L2 LINE L2 2593 2774 -540 648 254 88 68 chr2 124219400 124219558 -129037025 + MER46C DNA MER2_type 8 161 -177 2208 118 0 3 chr2 124219558 124219863 -129036720 - AluSx SINE Alu -8 304 1 648 254 88 68 chr2 124219863 124220011 -129036572 + MER46C DNA MER2_type 161 320 -18 307 259 170 14 chr2 124220070 124220217 -129036366 - L1MC4a LINE L1 -713 5451 5282 16949 120 30 56 chr2 124220307 124220480 -129036103 + Tigger2 DNA MER2_type 1 177 -2541 2415 93 0 6 chr2 124220480 124220791 -129035792 + AluSg SINE Alu 1 309 -1 16949 120 30 56 chr2 124220791 124221768 -129034815 + Tigger2 DNA MER2_type 177 1177 -1541 2027 104 42 0 chr2 124221768 124222057 -129034526 + AluSg SINE Alu 1 301 -9 16949 120 30 56 chr2 124222057 124223210 -129033373 + Tigger2 DNA MER2_type 1177 2224 -494 2307 77 3 0 chr2 124223210 124223497 -129033086 - AluY SINE Alu -23 288 1 16949 120 30 56 chr2 124223497 124223980 -129032603 + Tigger2 DNA MER2_type 2224 2718 0 1069 259 97 49 chr2 124223997 124224562 -129032021 + L2 LINE L2 2714 3304 -9 1523 201 10 14 chr2 124224687 124224975 -129031608 - AluJo SINE Alu -21 291 5 312 293 71 10 chr2 124225419 124225518 -129031065 + L2 LINE L2 3143 3247 -25 2526 67 0 0 chr2 124226359 124226658 -129029925 + AluY SINE Alu 1 299 -12 1743 182 3 3 chr2 124226767 124227069 -129029514 - AluJb SINE Alu -10 302 1 3205 249 105 35 chr2 124227103 124228346 -129028237 - L1MC4 LINE L1 0 8042 6714 455 255 93 45 chr2 124228351 124228598 -129027985 - L1MC4a LINE L1 -1273 6535 6330 1457 214 74 3 chr2 124228605 124228914 -129027669 + MER58B DNA MER1_type 5 335 -6 505 227 203 12 chr2 124229095 124229158 -129027425 - MER3 DNA MER1_type -3 206 156 2347 92 0 7 chr2 124229158 124229463 -129027120 + AluSx SINE Alu 1 303 -9 505 227 203 12 chr2 124229463 124229562 -129027021 - MER3 DNA MER1_type -53 156 13 342 263 25 0 chr2 124229562 124229642 -129026941 - MIR SINE MIR -65 143 62 1385 166 90 32 chr2 124229738 124230015 -129026568 - AluJb SINE Alu -19 293 1 263 345 24 12 chr2 124230645 124230729 -129025854 + MIR SINE MIR 31 115 -147 1365 253 114 15 chr2 124230785 124231239 -129025344 - MLT1G LTR MaLR 0 590 92 1173 155 0 95 chr2 124231326 124231408 -129025175 - AluJo SINE Alu -100 212 124 2513 56 0 7 chr2 124231408 124231711 -129024872 - AluY SINE Alu -10 301 1 1173 155 0 95 chr2 124231711 124231860 -129024723 - AluJo SINE Alu -188 124 3 977 217 33 5 chr2 124232041 124232253 -129024330 - MER20 DNA MER1_type -1 218 1 426 242 193 31 chr2 124232263 124232424 -129024159 + MER5A DNA MER1_type 3 189 0 21 0 0 0 chr2 124232538 124232559 -129024024 + AT_rich Low_complexity Low_complexity 1 21 0 258 265 26 43 chr2 124232645 124232762 -129023821 - L1MC4 LINE L1 -2 8040 7926 469 211 181 44 chr2 124233130 124233357 -129023226 + MER5C DNA MER1_type 1 258 -66 950 268 105 12 chr2 124233357 124233866 -129022717 - MLT1G1 LTR MaLR 0 595 1 240 191 127 32 chr2 124233866 124233929 -129022654 + MER5C DNA MER1_type 254 322 -2 319 283 90 52 chr2 124234059 124234292 -129022291 - HAL1 LINE L1 -1688 819 578 237 348 0 14 chr2 124234596 124234665 -129021918 + L2 LINE L2 3205 3272 0 435 106 212 0 chr2 124235274 124235387 -129021196 - MER69 DNA AcHobo -102 2424 2288 4416 159 53 30 chr2 124235444 124236574 -129020009 - L1MB3 LINE L1 -2 6417 5264 2070 226 80 47 chr2 124236589 124236749 -129019834 - L1MB3 LINE L1 -3166 3216 3063 2083 125 13 16 chr2 124236749 124237052 -129019531 - AluSx SINE Alu -10 302 1 2070 226 80 47 chr2 124237052 124238113 -129018470 - L1MB3 LINE L1 -3319 3063 1943 2178 99 0 17 chr2 124238153 124238446 -129018137 - AluSc SINE Alu -11 298 11 1788 270 32 8 chr2 124238482 124238998 -129017585 - L1MB3 LINE L1 -4660 1724 1189 216 0 0 0 chr2 124238998 124239022 -129017561 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1788 270 32 8 chr2 124239022 124239123 -129017460 - L1MB3 LINE L1 -5195 1189 1092 336 222 91 20 chr2 124239355 124239454 -129017129 - MIR SINE MIR -81 181 76 5479 153 23 47 chr2 124239699 124240796 -129015787 - MER11C LTR ERVK 0 1071 1 1741 150 47 13 chr2 124240871 124241171 -129015412 - AluJo SINE Alu -2 310 1 7457 179 61 44 chr2 124241252 124242845 -129013738 - MER52A LTR ERV1 0 1755 136 241 242 84 21 chr2 124243171 124243266 -129013317 - MER52A LTR ERV1 -1654 101 1 2588 205 70 33 chr2 124243269 124243884 -129012699 - L1ME1 LINE L1 -67 6099 5439 333 0 0 0 chr2 124243884 124243921 -129012662 + (TG)n Simple_repeat Simple_repeat 2 38 0 2588 205 70 33 chr2 124243921 124244233 -129012350 - L1ME1 LINE L1 -727 5439 5140 674 221 40 18 chr2 124244244 124244466 -129012117 - L1ME1 LINE L1 -1241 4905 4679 498 220 17 34 chr2 124244463 124244581 -129012002 - L1ME1 LINE L1 -2036 4110 3995 * 2312 101 0 0 chr2 124245192 124245490 -129011093 - AluSq SINE Alu -15 298 1 8621 217 57 43 chr2 124247249 124248109 -129008474 - L1MDa LINE L1 -714 5922 5076 2043 133 3 10 chr2 124248109 124248411 -129008172 - AluSx SINE Alu -12 300 1 8621 217 57 43 chr2 124248411 124248924 -129007659 - L1MDa LINE L1 -1560 5076 4572 2112 92 27 10 chr2 124248924 124249219 -129007364 - AluY SINE Alu -10 301 2 8621 217 57 43 chr2 124249219 124251105 -129005478 - L1MDa LINE L1 -2064 4572 2604 1007 173 0 0 chr2 124251147 124251303 -129005280 - AluJo SINE Alu -23 289 134 7191 50 12 6 chr2 124251303 124252974 -129003609 - L1PA6 LINE L1 0 6154 4484 20108 58 4 1 chr2 124252975 124255598 -129000985 + L1PA6 LINE L1 1861 4491 -1655 656 182 42 42 chr2 124255598 124255741 -129000842 - AluJo SINE Alu -169 143 1 21 0 0 0 chr2 124255818 124255839 -129000744 + AT_rich Low_complexity Low_complexity 1 21 0 319 290 85 35 chr2 124256076 124256276 -129000307 - HAL1 LINE L1 -847 1660 1451 754 183 22 104 chr2 124257383 124257638 -128998945 - L1ME3A LINE L1 -274 5896 5654 560 198 36 18 chr2 124257644 124257811 -128998772 - L1MC4 LINE L1 0 8042 7873 1336 82 0 0 chr2 124258010 124258192 -128998391 + L1PA6 LINE L1 5971 6152 -2 31 68 0 0 chr2 124258818 124258877 -128997706 + AT_rich Low_complexity Low_complexity 1 59 0 953 255 170 16 chr2 124259903 124260192 -128996391 - MLT1G LTR MaLR 0 590 347 2398 89 3 0 chr2 124260192 124260496 -128996087 - AluSp SINE Alu -6 307 3 953 255 170 16 chr2 124260496 124260733 -128995850 - MLT1G LTR MaLR -243 347 3 509 280 131 97 chr2 124261109 124261606 -128994977 - HAL1 LINE L1 -1866 641 128 223 312 104 16 chr2 124262150 124262275 -128994308 + MIR SINE MIR 77 212 -50 450 255 47 13 chr2 124262799 124262948 -128993635 - L1ME3 LINE L1 0 6162 6009 1601 142 67 4 chr2 124262956 124263223 -128993360 - MER7A DNA MER2_type -1 345 64 682 240 0 0 chr2 124263227 124263356 -128993227 + FLAM_A SINE Alu 5 133 0 4197 85 61 7 chr2 124263384 124263970 -128992613 - Charlie3 DNA MER1_type -4 2706 2089 265 167 0 0 chr2 124263987 124264029 -128992554 - Charlie3 DNA MER1_type -1029 1681 1640 5550 134 3 92 chr2 124264029 124265187 -128991396 - L1P LINE L1 -1010 5136 4081 306 360 26 0 chr2 124265195 124265309 -128991274 - L1MEc LINE L1 -5494 902 786 441 194 32 11 chr2 124265324 124265417 -128991166 + MER58 DNA MER1_type 5 99 -242 667 178 0 0 chr2 124265422 124265529 -128991054 - FLAM_C SINE Alu -36 107 1 392 171 61 12 chr2 124265546 124265628 -128990955 + MER58 DNA MER1_type 129 2419 -1 225 406 65 8 chr2 124266006 124266252 -128990331 - L1MEc LINE L1 -6026 370 111 1589 203 3 3 chr2 124266814 124267114 -128989469 - AluJo SINE Alu -12 300 1 341 301 8 32 chr2 124267780 124267903 -128988680 + (CATATA)n Simple_repeat Simple_repeat 5 124 0 2281 101 7 0 chr2 124268047 124268344 -128988239 - AluSc SINE Alu -10 299 1 656 198 119 6 chr2 124268727 124268904 -128987679 - HAL1 LINE L1 -854 1653 1457 321 313 167 42 chr2 124269076 124269316 -128987267 - HAL1 LINE L1 -2112 395 126 2255 103 0 0 chr2 124269318 124269610 -128986973 - AluSg SINE Alu -18 292 1 231 257 62 83 chr2 124269630 124269774 -128986809 - HAL1 LINE L1 -2365 142 2 2424 63 3 0 chr2 124270185 124270486 -128986097 - AluY SINE Alu -9 302 1 669 314 118 35 chr2 124270645 124270900 -128985683 + MLT1H1 LTR MaLR 2 277 -290 1374 221 16 39 chr2 124270918 124271302 -128985281 - L1MEd LINE L1 -3158 2971 2597 21 0 0 0 chr2 124271303 124271324 -128985259 + AT_rich Low_complexity Low_complexity 1 21 0 498 195 0 0 chr2 124271332 124271419 -128985164 - FLAM_A SINE Alu -41 101 15 577 238 45 15 chr2 124271426 124271628 -128984955 - L1M4 LINE L1 -3539 2607 2400 2226 109 0 0 chr2 124271648 124271941 -128984642 - AluSx SINE Alu -19 293 1 266 311 147 11 chr2 124272271 124272448 -128984135 - MIR SINE MIR -16 246 46 2276 110 0 0 chr2 124272449 124272750 -128983833 - AluSx SINE Alu -11 301 1 200 327 91 27 chr2 124272961 124273071 -128983512 - MER5A DNA MER1_type -38 151 35 928 184 8 114 chr2 124273396 124273641 -128982942 + MER20 DNA MER1_type 1 219 0 1757 175 7 14 chr2 124273702 124273993 -128982590 + AluJo SINE Alu 5 293 -19 598 266 42 37 chr2 124274490 124274731 -128981852 - L1ME3A LINE L1 -4 6166 5925 627 235 106 83 chr2 124274839 124275310 -128981273 + MLT1H1 LTR MaLR 1 510 -57 1005 251 118 16 chr2 124275356 124275750 -128980833 - L1ME3A LINE L1 -356 5814 5377 275 82 197 16 chr2 124275763 124275824 -128980759 - Tigger3(Golem) DNA MER2_type -2684 345 274 * 609 167 0 10 chr2 124275823 124275925 -128980658 - Tigger3(Golem) DNA MER2_type -2928 101 1 269 212 15 30 chr2 124275926 124275992 -128980591 + L1M4 LINE L1 4050 4114 -2032 279 197 40 13 chr2 124276092 124276168 -128980415 - L1MEd LINE L1 -3594 2535 2458 285 135 90 90 chr2 124276173 124276262 -128980321 - L1MB7 LINE L1 -10 6174 6086 2998 197 37 7 chr2 124276273 124276983 -128979600 - L1MB4 LINE L1 -6 6174 5444 1169 219 59 46 chr2 124277055 124277236 -128979347 - L1MB4 LINE L1 -1071 5075 4898 2603 114 42 47 chr2 124277236 124277440 -128979143 + MSTA LTR MaLR 1 204 -224 1941 98 43 0 chr2 124277440 124277716 -128978867 - AluSx SINE Alu -24 288 1 2603 114 42 47 chr2 124277716 124277941 -128978642 + MSTA LTR MaLR 204 428 0 1816 154 17 60 chr2 124277947 124278298 -128978285 - MER1B DNA MER1_type 0 337 2 1169 219 59 46 chr2 124278298 124278501 -128978082 - L1MB4 LINE L1 -1252 4894 4679 764 257 56 7 chr2 124278499 124278787 -128977796 - L1MEd LINE L1 -3687 2442 2141 * 316 320 32 8 chr2 124278762 124278887 -128977696 - L1MEd LINE L1 -5466 653 526 * 422 353 16 5 chr2 124279329 124279516 -128977067 - L1M4 LINE L1 -949 5197 5009 485 292 134 36 chr2 124279601 124280065 -128976518 - L1M4 LINE L1 -2244 3902 3390 333 277 64 37 chr2 124280113 124280400 -128976183 - L1 LINE L1 -1140 5006 4713 * 619 234 123 98 chr2 124280396 124280984 -128975599 - L1MEd LINE L1 -5264 855 248 1405 107 33 25 chr2 124280984 124281228 -128975355 - L1MA4A LINE L1 -4 6299 6054 619 234 123 98 chr2 124281228 124281480 -128975103 - L1MEd LINE L1 -5871 248 4 789 247 53 8 chr2 124281611 124281858 -128974725 + MIR SINE MIR 3 260 -2 2116 109 7 0 chr2 124282150 124282435 -128974148 - AluSg SINE Alu -23 287 1 2491 80 0 0 chr2 124282742 124283044 -128973539 + AluY SINE Alu 1 302 -9 6083 164 111 72 chr2 124283402 124284976 -128971607 + MER52A LTR ERV1 1 1634 -121 373 75 0 0 chr2 124285165 124285218 -128971365 - L1PA11 LINE L1 -1 6173 6121 615 194 0 8 chr2 124285235 124285359 -128971224 + MER52A LTR ERV1 1633 1755 0 296 387 28 80 chr2 124285923 124286287 -128970296 + L2 LINE L2 2920 3264 -8 5884 80 56 14 chr2 124287060 124288099 -128968484 - L1PA11 LINE L1 -2 6172 5098 27 29 0 0 chr2 124288125 124288159 -128968424 + AT_rich Low_complexity Low_complexity 1 34 0 255 301 14 0 chr2 124288266 124288339 -128968244 + (TATATG)n Simple_repeat Simple_repeat 2 75 0 300 291 84 62 chr2 124288502 124288681 -128967902 - L1ME LINE L1 -442 6490 6308 197 314 190 8 chr2 124289008 124289129 -128967454 - MIR SINE MIR -56 206 64 304 200 86 38 chr2 124289339 124289444 -128967139 - L1MC5 LINE L1 -31 7930 7821 730 232 28 63 chr2 124289608 124289892 -128966691 - L1MD2 LINE L1 -15 6344 6071 550 222 56 6 chr2 124289900 124290080 -128966503 - L1ME LINE L1 -2105 4852 4664 4122 68 59 35 chr2 124290189 124290880 -128965703 - SVA Other Other -246 1140 433 1094 186 0 23 chr2 124290999 124291263 -128965320 - SVA Other Other -520 866 609 5325 86 29 59 chr2 124291523 124293052 -128963531 - SVA Other Other -518 868 1 2800 242 78 30 chr2 124293055 124294872 -128961711 - L1M4b LINE L1 -2575 4382 2478 284 162 0 15 chr2 124294904 124294972 -128961611 + (TA)n Simple_repeat Simple_repeat 2 68 0 351 0 0 0 chr2 124295035 124295074 -128961509 + (CA)n Simple_repeat Simple_repeat 2 40 0 2420 84 7 0 chr2 124295088 124295387 -128961196 - AluSp SINE Alu -12 301 1 4578 249 97 40 chr2 124295399 124295919 -128960664 - L1M4b LINE L1 -4551 2408 1919 2540 67 0 13 chr2 124295919 124296234 -128960349 - AluY SINE Alu 0 311 1 4578 249 97 40 chr2 124296234 124296353 -128960230 - L1M4b LINE L1 -5040 1919 1808 2332 114 0 0 chr2 124296353 124296660 -128959923 - AluSg SINE Alu -3 307 1 4578 249 97 40 chr2 124296660 124297056 -128959527 - L1M4b LINE L1 -5151 1808 1436 1752 168 7 13 chr2 124297056 124297360 -128959223 - AluJb SINE Alu -6 306 5 4578 249 97 40 chr2 124297360 124298581 -128958002 - L1M4b LINE L1 -5523 1436 31 1116 213 30 36 chr2 124298592 124298954 -128957629 - L1MDa LINE L1 -2289 4251 3892 2406 196 60 53 chr2 124298967 124299687 -128956896 - MER50 LTR ERV1 0 734 10 243 203 38 38 chr2 124299736 124299815 -128956768 - L1MDa LINE L1 -2697 3843 3765 1132 213 25 11 chr2 124299966 124300261 -128956322 + LTR10B LTR ERV1 307 547 0 1632 211 111 30 chr2 124300282 124300603 -128955980 - L1MDa LINE L1 -2868 3672 3378 266 0 29 0 chr2 124300603 124300637 -128955946 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 1632 211 111 30 chr2 124300637 124301012 -128955571 - L1MDa LINE L1 -3162 3378 2920 660 221 68 93 chr2 124301073 124301589 -128954994 - L1MDa LINE L1 -4037 2503 2001 2983 164 64 21 chr2 124301589 124302200 -128954383 - LTR9B LTR ERV1 0 644 8 13374 144 12 8 chr2 124302207 124303559 -128953024 - HUERS-P3 LTR ERV1 -1 8918 7573 2344 98 0 3 chr2 124303559 124303865 -128952718 - AluY SINE Alu -6 305 1 13374 144 12 8 chr2 124303865 124304833 -128951750 - HUERS-P3 LTR ERV1 -1346 7573 4825 27 0 0 0 chr2 124304838 124304865 -128951718 + AT_rich Low_complexity Low_complexity 1 27 0 2034 87 0 11 chr2 124304980 124305246 -128951337 + AluSx SINE Alu 39 301 -11 386 139 40 89 chr2 124305246 124305347 -128951236 - LTR9B LTR ERV1 -548 96 1 2098 199 53 75 chr2 124305357 124305531 -128951052 - L1MDa LINE L1 -4547 1993 1817 2373 168 41 5 chr2 124305531 124305942 -128950641 + MSTB LTR MaLR 1 426 0 2098 199 53 75 chr2 124305942 124306335 -128950248 - L1MDa LINE L1 -4723 1817 1417 2035 110 55 7 chr2 124306335 124306627 -128949956 - AluY SINE Alu -5 306 1 2098 199 53 75 chr2 124306627 124307065 -128949518 - L1MDa LINE L1 -5123 1417 1010 369 322 38 90 chr2 124307277 124307488 -128949095 - L1MDa LINE L1 -5913 627 428 547 289 108 17 chr2 124307512 124307744 -128948839 - L1MDa LINE L1 -6093 447 195 352 273 43 68 chr2 124307806 124307967 -128948616 + MER5B DNA MER1_type 22 178 0 314 306 122 9 chr2 124308068 124308290 -128948293 + MLT1L LTR MaLR 317 563 -52 1046 216 102 46 chr2 124308387 124308452 -128948131 - MSTB2 LTR MaLR -8 449 389 2305 102 0 16 chr2 124308452 124308756 -128947827 + AluSq SINE Alu 1 299 -14 1046 216 102 46 chr2 124308756 124309101 -128947482 - MSTB2 LTR MaLR -68 389 16 23 54 0 0 chr2 124309679 124309716 -128946867 + AT_rich Low_complexity Low_complexity 1 37 0 802 108 69 0 chr2 124310007 124310137 -128946446 - MER85 DNA T2_type 0 139 1 965 192 70 34 chr2 124311638 124312082 -128944501 - LTR56 LTR ERV1 -11 565 1 349 295 211 12 chr2 124312611 124312777 -128943806 - MIR3 SINE MIR -6 202 4 476 280 44 50 chr2 124313058 124313240 -128943343 - MIR SINE MIR -72 190 10 200 200 18 0 chr2 124313432 124313487 -128943096 + (TATATG)n Simple_repeat Simple_repeat 4 59 0 190 329 79 0 chr2 124313728 124313804 -128942779 + L2 LINE L2 3189 3270 -2 839 255 0 11 chr2 124314108 124314296 -128942287 - MER5A DNA MER1_type -2 187 2 445 229 41 24 chr2 124315198 124315368 -128941215 - L1M4 LINE L1 -1757 4389 4217 255 222 63 0 chr2 124315372 124315435 -128941148 - L1M4 LINE L1 -2280 3866 3800 958 240 13 28 chr2 124315444 124315748 -128940835 - L1 LINE L1 -1821 4325 4027 293 214 24 12 chr2 124315794 124315878 -128940705 + L1ME1 LINE L1 3926 4010 -2136 230 163 0 0 chr2 124315895 124315938 -128940645 + L1ME1 LINE L1 5409 5451 -711 677 223 62 39 chr2 124315983 124316147 -128940436 + L1ME1 LINE L1 5449 5608 -558 3860 88 0 6 chr2 124316147 124316661 -128939922 + MER9 LTR ERVK 1 511 0 677 223 62 39 chr2 124316661 124317058 -128939525 + L1ME1 LINE L1 5608 6128 -38 252 245 132 97 chr2 124317057 124317314 -128939269 - L1ME LINE L1 -5534 536 271 * 282 271 35 0 chr2 124317374 124317459 -128939124 - L1ME LINE L1 -5887 183 96 638 339 124 16 chr2 124317952 124318507 -128938076 + L1M4 LINE L1 4405 5019 -1127 446 287 107 23 chr2 124318703 124319003 -128937580 + L1M4 LINE L1 5273 5597 -2211 826 178 0 0 chr2 124319116 124319245 -128937338 + 7SLRNA srpRNA srpRNA 1 129 -191 212 294 82 24 chr2 124319500 124319585 -128936998 - MER5B DNA MER1_type -11 167 78 237 173 27 27 chr2 124319769 124319844 -128936739 + T-rich Low_complexity Low_complexity 3 77 0 233 253 176 22 chr2 124320413 124320504 -128936079 + L2 LINE L2 3208 3312 -1 798 182 31 50 chr2 124320700 124320859 -128935724 - AluJb SINE Alu -28 284 129 233 242 0 0 chr2 124320928 124320994 -128935589 + L1M4c LINE L1 1336 1401 -4983 351 211 0 63 chr2 124321001 124321096 -128935487 + L1M4c LINE L1 1460 1548 -4836 1109 152 15 0 chr2 124321631 124321828 -128934755 + L1M4 LINE L1 5625 5824 -360 * 1357 201 40 7 chr2 124321824 124322122 -128934461 + L1MB7 LINE L1 5436 5743 -441 1558 225 8 0 chr2 124322125 124322485 -128934098 + L1MB7 LINE L1 5806 6168 -16 783 268 60 17 chr2 124322499 124322846 -128933737 - L1MC/D LINE L1 -2183 5625 5264 236 128 0 21 chr2 124323351 124323398 -128933185 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 613 305 180 18 chr2 124323437 124324139 -128932444 - L2 LINE L2 -16 3297 2476 393 22 0 0 chr2 124324593 124324639 -128931944 + (TG)n Simple_repeat Simple_repeat 1 46 0 21 0 0 0 chr2 124326183 124326204 -128930379 + AT_rich Low_complexity Low_complexity 1 21 0 2536 62 0 0 chr2 124326305 124326613 -128929970 + AluY SINE Alu 1 308 -3 658 253 12 29 chr2 124326980 124327150 -128929433 - MER5B DNA MER1_type 0 178 12 322 266 72 20 chr2 124327638 124327753 -128928830 - MIR SINE MIR -61 147 44 2075 62 0 40 chr2 124327920 124328193 -128928390 - AluY SINE Alu -10 301 40 24 32 0 0 chr2 124329939 124329970 -128926613 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr2 124330512 124330534 -128926049 + AT_rich Low_complexity Low_complexity 1 22 0 1980 172 17 0 chr2 124330548 124330902 -128925681 + MER46B DNA MER2_type 1 235 -1 23 0 0 0 chr2 124330956 124330979 -128925604 + AT_rich Low_complexity Low_complexity 1 23 0 727 285 31 12 chr2 124331082 124331338 -128925245 + MIR SINE MIR 2 262 0 2388 57 3 0 chr2 124331408 124331690 -128924893 - AluY SINE Alu -28 283 1 1249 207 52 7 chr2 124331690 124331980 -128924603 + MER58B DNA MER1_type 39 341 0 23 0 0 0 chr2 124332253 124332276 -128924307 + AT_rich Low_complexity Low_complexity 1 23 0 235 279 105 12 chr2 124332502 124332588 -128923995 - MER5A DNA MER1_type 0 189 96 616 237 78 78 chr2 124332603 124332848 -128923735 - MER5C DNA MER1_type -5 319 75 23 0 0 0 chr2 124333633 124333656 -128922927 + AT_rich Low_complexity Low_complexity 1 23 0 1449 203 14 0 chr2 124334696 124334972 -128921611 + AluJo SINE Alu 1 280 -32 11801 192 88 20 chr2 124334973 124336630 -128919953 - L1 LINE L1 -1099 5749 4206 2402 61 0 3 chr2 124336630 124336927 -128919656 + AluY SINE Alu 1 296 -15 11801 192 88 20 chr2 124336927 124338812 -128917771 - L1 LINE L1 -2642 4206 1887 1970 100 4 7 chr2 124338812 124339104 -128917479 - AluSx SINE Alu 0 307 17 11801 192 88 20 chr2 124339104 124339516 -128917067 - L1 LINE L1 -4961 1887 1504 261 291 73 36 chr2 124339521 124339631 -128916952 - L2 LINE L2 -55 3258 3145 774 191 40 83 chr2 124339631 124339883 -128916700 + L1ME3 LINE L1 5897 6137 -25 2583 277 152 30 chr2 124339919 124340206 -128916377 - L2 LINE L2 -163 3150 2899 1639 180 3 26 chr2 124340206 124340517 -128916066 - AluJo SINE Alu 0 312 9 2583 277 152 30 chr2 124340517 124341464 -128915119 - L2 LINE L2 -414 2899 1751 810 228 6 6 chr2 124341465 124341636 -128914947 - MIR SINE MIR 0 262 92 395 298 69 0 chr2 124342340 124342471 -128914112 + L1ME4a LINE L1 5436 5575 -2233 245 140 20 40 chr2 124342553 124342603 -128913980 + L1ME4a LINE L1 5969 6017 -104 1758 86 66 0 chr2 124342892 124343136 -128913447 + AluSq SINE Alu 39 298 -15 2370 51 14 0 chr2 124343136 124343428 -128913155 + AluY SINE Alu 1 296 -15 239 286 13 0 chr2 124343445 124343522 -128913061 + Charlie7 DNA MER1_type 25 102 -2510 26 0 0 0 chr2 124343703 124343729 -128912854 + AT_rich Low_complexity Low_complexity 1 26 0 2043 219 115 52 chr2 124343809 124344426 -128912157 - L1MC5 LINE L1 -447 7514 6829 1885 145 3 43 chr2 124344426 124344730 -128911853 - AluSx SINE Alu -20 292 1 2043 219 115 52 chr2 124344730 124344944 -128911639 - L1MC5 LINE L1 -1132 6829 6630 451 233 60 17 chr2 124345413 124345529 -128911054 + MER5C DNA MER1_type 4 124 -200 419 189 0 21 chr2 124345538 124345633 -128910950 + MER5C DNA MER1_type 230 322 -2 183 80 0 0 chr2 124345772 124345797 -128910786 + (GTTTG)n Simple_repeat Simple_repeat 5 29 0 223 245 75 0 chr2 124347625 124347678 -128908905 + L2 LINE L2 2992 3048 -224 23 0 0 0 chr2 124348346 124348369 -128908214 + AT_rich Low_complexity Low_complexity 1 23 0 3088 212 91 24 chr2 124348528 124349989 -128906594 + L1ME1 LINE L1 474 2129 -4616 8397 214 157 51 chr2 124349994 124351053 -128905530 + L1M2 LINE L1 1 946 -5902 234 0 0 0 chr2 124351053 124351079 -128905504 + (CA)n Simple_repeat Simple_repeat 2 27 0 8397 214 157 51 chr2 124351079 124353718 -128902865 + L1M2 LINE L1 946 3303 -3545 594 212 68 0 chr2 124353718 124353850 -128902733 + FLAM_A SINE Alu 2 142 0 8397 214 157 51 chr2 124353850 124354823 -128901760 + L1M2 LINE L1 3303 4171 -2677 1625 187 0 31 chr2 124354823 124355117 -128901466 + AluJo SINE Alu 12 296 -16 8397 214 157 51 chr2 124355117 124355799 -128900784 + L1M2 LINE L1 4171 6073 -775 10761 131 69 9 chr2 124355800 124357633 -128898950 + Tigger1 DNA MER2_type 62 2004 -414 1160 186 65 8 chr2 124357652 124357915 -128898668 + Tigger1 DNA MER2_type 2141 2418 0 2512 247 60 37 chr2 124357916 124358013 -128898570 + L1M4 LINE L1 3280 3373 -2773 1970 126 16 49 chr2 124358013 124358401 -128898182 + THE1C LTR MaLR 1 375 0 2512 247 60 37 chr2 124358401 124359238 -128897345 + L1M4 LINE L1 3373 4235 -1911 255 280 11 11 chr2 124359225 124359318 -128897265 + L1ME1 LINE L1 2670 2762 -3802 * 1925 243 26 37 chr2 124359321 124359947 -128896636 + L1ME1 LINE L1 5962 6580 -4 245 158 0 0 chr2 124359972 124360010 -128896573 + tRNA-Gly-GGA tRNA tRNA 1 38 -37 2760 200 112 31 chr2 124360214 124360979 -128895604 - L1MB7 LINE L1 -24 6160 5334 763 161 0 0 chr2 124361003 124361121 -128895462 + FLAM_A SINE Alu 1 118 -15 282 267 112 0 chr2 124361234 124361395 -128895188 + L1M4 LINE L1 2179 2357 -3789 261 0 0 0 chr2 124361743 124361772 -128894811 + (T)n Simple_repeat Simple_repeat 1 29 0 23 54 0 0 chr2 124362291 124362328 -128894255 + AT_rich Low_complexity Low_complexity 1 37 0 1816 146 0 30 chr2 124363414 124363715 -128892868 + AluJo SINE Alu 10 301 -11 750 192 13 32 chr2 124363728 124363884 -128892699 + FRAM SINE Alu 8 160 -16 233 196 43 43 chr2 124363968 124363983 -128892600 - L1MA10 LINE L1 0 6334 6320 1350 233 44 76 chr2 124363983 124364482 -128892101 - L1ME3A LINE L1 -8 6162 5680 258 294 78 10 chr2 124364636 124364738 -128891845 - MIR SINE MIR -1 261 153 442 191 21 21 chr2 124364814 124364908 -128891675 + U13 snRNA snRNA 1 94 -10 1799 169 16 0 chr2 124364948 124365255 -128891328 + AluSx SINE Alu 1 312 0 338 260 47 40 chr2 124365744 124365894 -128890689 + L1ME3A LINE L1 5049 5199 -947 1894 236 110 28 chr2 124365952 124366725 -128889858 + L1ME3A LINE L1 5318 6161 -9 2028 128 3 3 chr2 124367044 124367341 -128889242 + AluSx SINE Alu 7 303 -9 189 291 19 58 chr2 124367835 124367938 -128888645 + MER5A DNA MER1_type 88 186 -3 2096 111 3 19 chr2 124368495 124368810 -128887773 + AluSx SINE Alu 1 310 -2 23 0 0 0 chr2 124369709 124369732 -128886851 + AT_rich Low_complexity Low_complexity 1 23 0 270 203 14 0 chr2 124369889 124369958 -128886625 - L1MA10 LINE L1 -4 6330 6261 * 1715 269 67 6 chr2 124369956 124370585 -128885998 - L1M4 LINE L1 -2275 3871 3205 1491 177 31 3 chr2 124370589 124370877 -128885706 + AluJo SINE Alu 1 296 -16 739 243 14 129 chr2 124370937 124371352 -128885231 + HAL1b LINE L1 462 825 -523 2360 67 0 7 chr2 124371352 124371650 -128884933 + AluY SINE Alu 5 300 -11 739 243 14 129 chr2 124371650 124371675 -128884908 + HAL1b LINE L1 825 851 -497 260 305 85 35 chr2 124371770 124372029 -128884554 + HAL1b LINE L1 1064 1335 -13 516 231 0 48 chr2 124372302 124372449 -128884134 - LTR33A LTR ERVL -1 522 383 306 89 22 0 chr2 124372523 124372568 -128884015 + MLT2E LTR ERVL 583 628 0 2088 104 17 10 chr2 124374605 124374903 -128881680 - AluSx SINE Alu -12 300 1 471 349 38 15 chr2 124374916 124375177 -128881406 - L2 LINE L2 -575 2739 2473 219 313 0 15 chr2 124376012 124376079 -128880504 + MIR3 SINE MIR 134 199 -9 842 205 25 5 chr2 124377856 124378056 -128878527 + L1PA7 LINE L1 509 712 -5749 21009 91 24 15 chr2 124378058 124378288 -128878295 + L1PA7 LINE L1 2419 2645 -3824 1662 192 0 0 chr2 124378288 124378601 -128877982 + AluSp SINE Alu 1 313 0 21009 91 24 15 chr2 124378601 124382385 -128874198 + L1PA7 LINE L1 2645 6469 0 486 180 32 106 chr2 124383777 124383966 -128872617 - L1MC5 LINE L1 -909 7052 6878 1764 153 4 4 chr2 124384296 124384570 -128872013 - AluSx SINE Alu -38 274 1 948 209 18 0 chr2 124384588 124384813 -128871770 + L1MA4 LINE L1 6062 6290 -10 1242 146 105 71 chr2 124385748 124386042 -128870541 - AluJo SINE Alu -8 304 1 198 0 0 0 chr2 124387001 124387023 -128869560 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 1875 149 171 8 chr2 124387234 124387602 -128868981 - MSTA LTR MaLR 0 428 1 309 221 44 66 chr2 124388082 124388218 -128868365 - HAL1 LINE L1 -13 2494 2362 24 0 0 0 chr2 124388259 124388283 -128868300 + AT_rich Low_complexity Low_complexity 1 24 0 1410 219 45 52 chr2 124388611 124389058 -128867525 + LTR55 LTR ERV 42 485 -63 459 259 161 35 chr2 124389244 124389561 -128867022 - HAL1 LINE L1 -622 1885 1529 * 36343 56 6 6 chr2 124389551 124395070 -128861513 - L1PA5 LINE L1 0 6154 632 262 341 22 11 chr2 124395201 124395292 -128861291 - LTR16C LTR ERVL -310 181 90 253 224 86 0 chr2 124395312 124395370 -128861213 + MIR SINE MIR 164 226 -36 1806 102 49 19 chr2 124395379 124395643 -128860940 + AluSx SINE Alu 11 282 -30 1378 187 81 0 chr2 124395923 124396196 -128860387 + AluJo SINE Alu 1 295 -17 1434 189 0 26 chr2 124396959 124397223 -128859360 - AluJo SINE Alu -48 264 8 465 225 54 0 chr2 124397328 124397439 -128859144 + L1ME1 LINE L1 5826 5942 -224 238 281 0 12 chr2 124397476 124397558 -128859025 + L1MC4 LINE L1 7908 7988 -54 2477 94 11 14 chr2 124397672 124398043 -128858540 + L1PA14 LINE L1 5789 6158 -3 990 248 57 31 chr2 124398068 124398472 -128858111 - L1ME LINE L1 -552 5618 5197 754 88 0 0 chr2 124398472 124398585 -128857998 - L1MA5 LINE L1 0 6300 6188 990 248 57 31 chr2 124398585 124398608 -128857975 - L1ME LINE L1 -973 5197 5176 188 67 33 0 chr2 124398985 124399015 -128857568 + (TTCA)n Simple_repeat Simple_repeat 4 34 0 286 234 78 47 chr2 124399019 124399147 -128857436 - L1ME LINE L1 -312 5809 5678 603 214 54 42 chr2 124399178 124399346 -128857237 + MIR SINE MIR 2 171 -91 262 301 14 14 chr2 124400007 124400080 -128856503 - MIR3 SINE MIR -48 160 88 271 316 13 0 chr2 124400273 124400352 -128856231 + L3 LINE CR1 1495 1574 -3 1771 139 11 11 chr2 124401448 124401753 -128854830 - AluSx SINE Alu 0 322 18 25 65 0 0 chr2 124401779 124401825 -128854758 + AT_rich Low_complexity Low_complexity 1 46 0 726 97 0 146 chr2 124402397 124402541 -128854042 + FLAM_C SINE Alu 1 123 -20 2643 221 94 58 chr2 124403031 124403442 -128853141 - L1M4 LINE L1 -2297 3849 3454 1598 166 0 18 chr2 124403442 124403725 -128852858 - AluJo SINE Alu -34 278 1 2643 221 94 58 chr2 124403725 124404581 -128852002 - L1M4 LINE L1 -2692 3454 2536 1953 101 58 4 chr2 124404928 124405204 -128851379 + AluSc SINE Alu 1 291 -18 871 212 27 11 chr2 124405375 124405559 -128851024 + MER5A DNA MER1_type 3 189 0 2310 100 0 3 chr2 124405670 124405979 -128850604 - AluSx SINE Alu -3 309 2 2092 144 18 6 chr2 124406028 124406367 -128850216 - MER2 DNA MER2_type 0 344 2 22 35 0 0 chr2 124406441 124406470 -128850113 + AT_rich Low_complexity Low_complexity 1 29 0 726 97 0 146 chr2 124407191 124407335 -128849248 + FLAM_C SINE Alu 1 123 -20 3301 218 107 48 chr2 124407825 124408236 -128848347 - L1M4 LINE L1 -2297 4347 3962 1585 170 0 18 chr2 124408236 124408519 -128848064 - AluJo SINE Alu -34 278 1 3301 218 107 48 chr2 124408519 124409587 -128846996 - L1M4 LINE L1 -2682 3962 2781 887 190 46 9 chr2 124409580 124409796 -128846787 - L1M4 LINE L1 -4928 1614 1391 * 188 0 0 69 chr2 124409883 124409912 -128846671 + (TTAA)n Simple_repeat Simple_repeat 4 30 0 2288 93 0 3 chr2 124409912 124410201 -128846382 - AluSx SINE Alu -24 288 1 201 306 83 14 chr2 124410270 124410342 -128846241 - MER5A DNA MER1_type -16 173 97 21 0 0 0 chr2 124410572 124410593 -128845990 + AT_rich Low_complexity Low_complexity 1 21 0 2185 128 0 0 chr2 124410739 124411045 -128845538 + AluSx SINE Alu 1 306 -6 208 0 30 30 chr2 124412388 124412421 -128844162 + (TG)n Simple_repeat Simple_repeat 2 34 0 1574 175 7 16 chr2 124412436 124412739 -128843844 - AluJo SINE Alu -7 305 6 181 182 55 91 chr2 124412852 124412907 -128843676 - MIR SINE MIR -167 95 43 363 235 102 60 chr2 124412971 124413469 -128843114 - HAL1b LINE L1 -634 714 137 2452 62 3 0 chr2 124413665 124413957 -128842626 - AluY SINE Alu -18 293 1 22 35 0 0 chr2 124414369 124414398 -128842185 + AT_rich Low_complexity Low_complexity 1 29 0 200 135 27 0 chr2 124414967 124415004 -128841579 - L3b LINE CR1 -250 1333 1296 26 0 0 0 chr2 124418983 124419009 -128837574 + AT_rich Low_complexity Low_complexity 1 26 0 2002 264 108 26 chr2 124423337 124424103 -128832480 + L2 LINE L2 1040 1868 -1446 291 281 140 9 chr2 124424105 124424219 -128832364 + MER91B DNA MER1_type 2 130 -60 813 273 113 45 chr2 124424327 124424770 -128831813 + L2 LINE L2 1862 2334 -980 1067 188 153 99 chr2 124424770 124424867 -128831716 - L1MD3 LINE L1 -1 7994 7904 2060 114 7 23 chr2 124424867 124425173 -128831410 - AluSx SINE Alu -11 301 1 1067 188 153 99 chr2 124425173 124425507 -128831076 - L1MD3 LINE L1 -91 7904 7540 213 325 24 63 chr2 124425507 124425633 -128830950 + L2 LINE L2 2321 2441 -873 679 175 26 0 chr2 124425637 124425751 -128830832 + MER5A DNA MER1_type 73 189 0 974 279 159 29 chr2 124425752 124426364 -128830219 + L2 LINE L2 2437 3126 -187 240 146 146 0 chr2 124426404 124426452 -128830131 + Tigger5 DNA MER2_type 1 55 -2268 293 183 33 33 chr2 124426473 124426533 -128830050 + Tigger5 DNA MER2_type 2264 2323 0 237 292 62 0 chr2 124426533 124426598 -128829985 + L2 LINE L2 3184 3252 -61 213 309 66 33 chr2 124426599 124426751 -128829832 - L2 LINE L2 -7 3306 3150 199 268 249 29 chr2 124426981 124427190 -128829393 - MIR SINE MIR 0 262 8 3245 165 114 4 chr2 124427781 124428489 -128828094 - L1MB7 LINE L1 -59 6361 5576 469 203 86 8 chr2 124428489 124428617 -128827966 + Tigger5 DNA MER2_type 1 138 -2185 * 1118 151 111 0 chr2 124428613 124428812 -128827771 + Tigger5 DNA MER2_type 2103 2323 0 475 176 32 16 chr2 124428818 124428943 -128827640 - L1MB7 LINE L1 -812 5570 5444 * 1479 217 84 19 chr2 124428918 124429635 -128826948 - L1MB7 LINE L1 -3380 3002 2218 2016 91 66 21 chr2 124429635 124429921 -128826662 - AluSg SINE Alu -11 299 1 1479 217 84 19 chr2 124429921 124429982 -128826601 - L1MB7 LINE L1 -4164 2218 2162 331 100 29 29 chr2 124429982 124430052 -128826531 + (TTATG)n Simple_repeat Simple_repeat 3 72 0 1923 152 0 7 chr2 124430052 124430342 -128826241 - AluSx SINE Alu -24 288 1 343 257 22 77 chr2 124430342 124430525 -128826058 - L1MB7 LINE L1 -4207 2177 2005 1690 153 14 35 chr2 124430760 124431048 -128825535 - AluJo SINE Alu -19 293 12 21 57 0 0 chr2 124431253 124431288 -128825295 + AT_rich Low_complexity Low_complexity 1 35 0 270 219 57 19 chr2 124431393 124431498 -128825085 - L1MD3 LINE L1 -1405 6590 6482 514 238 111 12 chr2 124431513 124431685 -128824898 - L1MC4a LINE L1 -1380 6497 6309 497 286 62 11 chr2 124431688 124431866 -128824717 - L1MC4a LINE L1 -2197 5680 5494 339 160 181 0 chr2 124431875 124431969 -128824614 - L1MA10 LINE L1 -11 6323 6213 275 223 91 74 chr2 124431989 124432164 -128824419 - L1MC4a LINE L1 -2376 5501 5324 315 222 0 86 chr2 124432478 124432559 -128824024 + L1 LINE L1 4900 4973 -1173 180 0 0 0 chr2 124432562 124432582 -128824001 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 5994 79 22 55 chr2 124432582 124433861 -128822722 - L1PA11 LINE L1 -6 6168 4879 623 265 65 19 chr2 124433875 124434184 -128822399 - LTR37A LTR ERV1 -58 368 46 2165 114 0 10 chr2 124434383 124434682 -128821901 + AluSx SINE Alu 5 300 -12 1855 139 0 3 chr2 124435066 124435353 -128821230 + AluSq SINE Alu 1 286 -27 8550 50 19 1 chr2 124435444 124437298 -128819285 - L1PA6 LINE L1 -7 6147 4248 2127 131 0 3 chr2 124437880 124438192 -128818391 - AluJb SINE Alu -1 311 1 1087 231 128 45 chr2 124438603 124439132 -128817451 - L1MC4 LINE L1 0 8042 7470 792 281 75 15 chr2 124439140 124439538 -128817045 - L1MC4 LINE L1 -677 7365 6944 1818 171 78 3 chr2 124440018 124440362 -128816221 - MLT1C LTR MaLR 0 467 98 3049 203 87 24 chr2 124440417 124441367 -128815216 - L1MC4a LINE L1 -865 5350 4341 310 169 17 0 chr2 124441417 124441476 -128815107 - L1MC4a LINE L1 -6302 94 35 1281 157 0 0 chr2 124441563 124441767 -128814816 + MER2 DNA MER2_type 6 209 -136 24 32 0 0 chr2 124441772 124441803 -128814780 + AT_rich Low_complexity Low_complexity 1 31 0 315 0 0 0 chr2 124442491 124442526 -128814057 + (CA)n Simple_repeat Simple_repeat 2 36 0 1208 150 80 9 chr2 124443196 124443422 -128813161 + L1PA16 LINE L1 5912 6153 -13 1231 136 0 0 chr2 124443424 124443600 -128812983 + AluSg/x SINE Alu 137 312 0 619 347 99 32 chr2 124443860 124444098 -128812485 + L3 LINE CR1 1160 1433 -144 2155 98 17 0 chr2 124444098 124444394 -128812189 + AluSq SINE Alu 1 301 -12 619 347 99 32 chr2 124444394 124444527 -128812056 + L3 LINE CR1 1433 1556 -21 1895 155 13 7 chr2 124445825 124446129 -128810454 - AluJo SINE Alu 0 312 7 25 51 0 0 chr2 124446774 124446813 -128809770 + AT_rich Low_complexity Low_complexity 1 39 0 1660 164 59 3 chr2 124447793 124448079 -128808504 + AluSx SINE Alu 1 302 -10 495 247 309 5 chr2 124448527 124448721 -128807862 + MIR SINE MIR 1 253 -9 271 279 13 142 chr2 124448829 124449062 -128807521 - MIR3 SINE MIR -3 205 3 2401 58 0 0 chr2 124450409 124450702 -128805881 - AluY SINE Alu -18 293 1 1903 124 82 25 chr2 124450746 124451101 -128805482 + THE1C LTR MaLR 1 375 0 964 178 0 28 chr2 124452185 124452365 -128804218 + FAM SINE Alu 1 175 0 2530 73 0 0 chr2 124452525 124452827 -128803756 - AluY SINE Alu -9 302 1 672 253 51 17 chr2 124453320 124453498 -128803085 + MIR SINE MIR 1 184 -78 1948 153 0 13 chr2 124453697 124454005 -128802578 - AluJb SINE Alu -8 304 1 1060 192 9 36 chr2 124454859 124455078 -128801505 - AluJo SINE Alu -15 297 85 234 0 0 0 chr2 124455813 124455839 -128800744 + (TG)n Simple_repeat Simple_repeat 2 27 0 402 291 81 29 chr2 124456278 124456488 -128800095 - Charlie8 DNA MER1_type -2152 265 45 940 266 10 65 chr2 124457802 124457975 -128798608 - MLT1I LTR MaLR -67 342 190 2481 66 0 22 chr2 124457975 124458293 -128798290 - AluY SINE Alu 0 311 1 940 266 10 65 chr2 124458293 124458409 -128798174 - MLT1I LTR MaLR -219 190 69 28 29 0 0 chr2 124459264 124459299 -128797284 + AT_rich Low_complexity Low_complexity 1 35 0 460 73 0 0 chr2 124459944 124460012 -128796571 + L1PA4 LINE L1 6087 6154 -1 1340 195 19 28 chr2 124460032 124460350 -128796233 + L1MB7 LINE L1 5869 6183 -1 208 274 143 36 chr2 124460434 124460518 -128796065 - L2 LINE L2 -30 3242 3150 288 0 0 0 chr2 124462159 124462191 -128794392 + (CA)n Simple_repeat Simple_repeat 1 32 0 25 0 0 0 chr2 124462523 124462548 -128794035 + AT_rich Low_complexity Low_complexity 1 25 0 434 311 77 14 chr2 124462548 124462834 -128793749 + HAL1 LINE L1 2204 2507 0 226 141 0 125 chr2 124463296 124463360 -128793223 + L1ME4a LINE L1 6062 6117 -4 1678 182 14 18 chr2 124463958 124464244 -128792339 + AluJo SINE Alu 1 285 -27 2282 184 80 12 chr2 124465198 124466103 -128790480 - Tigger6a DNA MER2_type -7 1076 1 549 299 168 25 chr2 124466570 124466943 -128789640 + L2 LINE L2 2662 3088 -225 189 150 0 50 chr2 124466957 124466997 -128789586 + L2 LINE L2 3276 3313 0 542 329 161 18 chr2 124467144 124467530 -128789053 - L3 LINE CR1 -5 1572 1132 430 299 134 5 chr2 124468061 124468248 -128788335 - MIR SINE MIR 0 262 52 1155 322 61 18 chr2 124468818 124469262 -128787321 + MER115 DNA AcHobo 227 689 -4 2460 59 0 0 chr2 124470054 124470381 -128786202 + AluY SINE Alu 1 327 0 724 207 0 15 chr2 124470634 124470769 -128785814 - FLAM_A SINE Alu 0 133 1 1033 81 0 75 chr2 124472083 124472244 -128784339 + MER1B DNA MER1_type 190 338 -1 495 234 144 0 chr2 124472325 124472492 -128784091 - L1MC5 LINE L1 -44 7917 7727 1020 159 36 73 chr2 124472785 124473005 -128783578 + AluJb SINE Alu 87 298 -14 396 202 0 32 chr2 124473085 124473179 -128783404 - L1MC5 LINE L1 -54 7907 7817 2796 222 36 9 chr2 124473240 124473874 -128782709 + MER82 DNA MER2_type 2 652 -1 651 171 16 16 chr2 124474117 124474246 -128782337 + BC200 scRNA scRNA 1 129 -71 750 258 28 9 chr2 124474270 124474487 -128782096 - MER46C DNA MER2_type -36 302 82 512 96 41 0 chr2 124475156 124475229 -128781354 + AluJ/FLAM SINE Alu 1 76 -236 182 303 0 30 chr2 124475751 124475817 -128780766 + MIR SINE MIR 199 262 0 3866 186 72 19 chr2 124475842 124476741 -128779842 + L1MB8 LINE L1 5237 6178 0 2337 88 3 0 chr2 124476832 124477126 -128779457 + AluSq SINE Alu 1 295 -18 26 88 0 0 chr2 124477148 124477216 -128779367 + AT_rich Low_complexity Low_complexity 1 68 0 30 0 0 0 chr2 124477236 124477266 -128779317 + AT_rich Low_complexity Low_complexity 1 30 0 201 314 173 44 chr2 124478815 124479041 -128777542 - MIR SINE MIR -4 258 4 3603 115 37 14 chr2 124479524 124480113 -128776470 - LTR26 LTR ERV1 0 603 1 265 208 0 39 chr2 124480505 124480582 -128776001 + HsTC2 DNA Tc2 5 78 -1820 1140 175 47 140 chr2 124480606 124480923 -128775660 - MLT1A1 LTR MaLR 0 365 91 1835 156 7 3 chr2 124480923 124481212 -128775371 - AluJb SINE Alu -17 295 6 1140 175 47 140 chr2 124481212 124481295 -128775288 - MLT1A1 LTR MaLR -274 91 2 2216 89 7 10 chr2 124481825 124482118 -128774465 + AluSx SINE Alu 3 294 -18 23 0 0 0 chr2 124482371 124482394 -128774189 + AT_rich Low_complexity Low_complexity 1 23 0 251 209 0 0 chr2 124482764 124482807 -128773776 + MER58A DNA MER1_type 1 43 -181 1008 205 57 14 chr2 124483033 124483243 -128773340 + MER58A DNA MER1_type 1 219 -5 2407 50 0 17 chr2 124483434 124483732 -128772851 + AluY SINE Alu 1 293 -18 1721 168 41 7 chr2 124483949 124484241 -128772342 - AluJo SINE Alu -10 302 1 603 163 136 63 chr2 124484244 124484477 -128772106 - L1MC5 LINE L1 -36 7925 7647 2553 68 0 0 chr2 124484477 124484786 -128771797 - AluY SINE Alu -2 309 1 603 163 136 63 chr2 124484786 124484839 -128771744 - L1MC5 LINE L1 -314 7647 7599 3820 242 85 48 chr2 124484850 124484975 -128771608 - L1MB7 LINE L1 0 6184 6065 2355 93 6 0 chr2 124484975 124485286 -128771297 - AluSp SINE Alu 0 313 1 3820 242 85 48 chr2 124485286 124485970 -128770613 - L1MB7 LINE L1 -119 6065 5408 2051 155 139 16 chr2 124485970 124486351 -128770232 - MSTA LTR MaLR 0 428 1 3820 242 85 48 chr2 124486351 124487909 -128768674 - L1MB7 LINE L1 -776 5408 3717 3147 151 66 0 chr2 124487934 124488452 -128768131 - L1MB2 LINE L1 -3 6168 5617 2263 213 90 75 chr2 124488473 124489122 -128767461 - L1MC5 LINE L1 -368 7593 6901 2136 97 11 0 chr2 124489122 124489437 -128767146 - AluSp SINE Alu 0 318 1 2263 213 90 75 chr2 124489437 124489814 -128766769 - L1MC5 LINE L1 -1060 6901 6531 213 39 0 0 chr2 124490025 124490051 -128766532 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 503 167 13 0 chr2 124490056 124490134 -128766449 - AluJb SINE Alu -25 287 209 1369 259 66 33 chr2 124490260 124490774 -128765809 - L1MC5 LINE L1 -1866 5942 5412 25 51 0 0 chr2 124492809 124492848 -128763735 + AT_rich Low_complexity Low_complexity 1 39 0 22 35 0 0 chr2 124497490 124497519 -128759064 + AT_rich Low_complexity Low_complexity 1 29 0 2390 80 0 13 chr2 124498999 124499300 -128757283 + AluSc SINE Alu 1 297 -12 982 261 144 27 chr2 124499752 124500231 -128756352 - L1MC4a LINE L1 -1890 5918 5384 1568 155 45 58 chr2 124500818 124501022 -128755561 - AluJb SINE Alu 0 312 131 194 0 39 0 chr2 124501022 124501048 -128755535 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1568 155 45 58 chr2 124501048 124501178 -128755405 - AluJb SINE Alu -181 131 1 896 174 72 47 chr2 124501585 124501821 -128754762 - AluJo SINE Alu 0 312 71 351 172 31 0 chr2 124501826 124501890 -128754693 + AluJ/FRAM SINE Alu 233 298 -4 637 214 129 25 chr2 124501890 124502091 -128754492 + L1ME1 LINE L1 1369 1590 -4794 1613 184 0 33 chr2 124502106 124502405 -128754178 + AluJo SINE Alu 1 289 -23 8388 182 82 42 chr2 124502406 124503722 -128752861 + L1ME1 LINE L1 3536 4798 -1750 2419 87 3 0 chr2 124503722 124504022 -128752561 + AluSp SINE Alu 1 301 -12 8388 182 82 42 chr2 124504022 124504524 -128752059 + L1ME1 LINE L1 4798 5278 -1270 2161 111 3 10 chr2 124504524 124504822 -128751761 - AluSx SINE Alu -3 309 14 8388 182 82 42 chr2 124504822 124505322 -128751261 + L1ME1 LINE L1 5278 5984 -564 2129 123 3 16 chr2 124505322 124505638 -128750945 + AluSx SINE Alu 1 312 0 8388 182 82 42 chr2 124505638 124505839 -128750744 + L1ME1 LINE L1 5984 6175 -373 1736 185 0 7 chr2 124505849 124506141 -128750442 + AluJb SINE Alu 3 292 -20 2838 175 74 16 chr2 124506183 124506573 -128750010 + L1MC2 LINE L1 5254 5691 -653 2073 119 34 0 chr2 124506573 124506867 -128749716 + AluSc SINE Alu 1 304 -5 2838 175 74 16 chr2 124506867 124507058 -128749525 + L1MC2 LINE L1 5691 5869 -475 2059 149 65 67 chr2 124507535 124507793 -128748790 + L1MC2 LINE L1 5858 6116 -228 2247 89 13 10 chr2 124507793 124508097 -128748486 + AluSx SINE Alu 1 305 -7 2059 149 65 67 chr2 124508097 124508314 -128748269 + L1MC2 LINE L1 6116 6332 -12 544 235 118 32 chr2 124508329 124508516 -128748067 + L2 LINE L2 3075 3277 -36 954 157 6 13 chr2 124508756 124508915 -128747668 - AluJo SINE Alu -22 290 133 297 0 0 0 chr2 124508926 124508959 -128747624 + (CA)n Simple_repeat Simple_repeat 1 66 0 297 0 0 0 chr2 124508959 124508992 -128747591 + (CA)n Simple_repeat Simple_repeat 2 34 0 854 150 8 8 chr2 124509014 124509147 -128747436 - AluJo SINE Alu -169 133 1 258 32 0 0 chr2 124509149 124509180 -128747403 + (TTTC)n Simple_repeat Simple_repeat 3 33 0 1856 136 0 31 chr2 124509182 124509468 -128747115 - AluSx SINE Alu -35 277 1 2098 104 49 0 chr2 124509479 124509767 -128746816 - AluSg SINE Alu -8 302 1 593 54 0 3 chr2 124509837 124510070 -128746513 - AluY SINE Alu 0 309 2 360 269 127 0 chr2 124510378 124510512 -128746071 + L1MEc LINE L1 2121 2271 -4125 364 267 74 0 chr2 124510515 124510650 -128745933 + L1ME1 LINE L1 6191 6335 -67 261 81 111 0 chr2 124510657 124510702 -128745881 + AluSg SINE Alu 1 46 -257 4720 119 16 32 chr2 124510702 124512099 -128744484 + pTR5 LTR ERV1 750 2438 0 2080 88 0 4 chr2 124512102 124512364 -128744219 + AluSg SINE Alu 31 291 -19 1373 257 107 8 chr2 124512430 124512909 -128743674 - L1M4 LINE L1 -1702 4942 4417 667 186 142 11 chr2 124512905 124513088 -128743495 + L1M4 LINE L1 4936 5142 -1502 * 1148 141 0 37 chr2 124513109 124513300 -128743283 + AluSg/x SINE Alu 127 310 0 2230 113 0 0 chr2 124513431 124513737 -128742846 + AluSx SINE Alu 1 306 0 22 0 0 0 chr2 124513766 124513788 -128742795 + AT_rich Low_complexity Low_complexity 1 22 0 1397 170 0 89 chr2 124513792 124514116 -128742467 + AluJo SINE Alu 1 295 -17 24 0 0 0 chr2 124514124 124514148 -128742435 + AT_rich Low_complexity Low_complexity 1 24 0 271 252 84 32 chr2 124514297 124514452 -128742131 - L1 LINE L1 -1527 4619 4457 1922 129 3 20 chr2 124514599 124514902 -128741681 - AluSq SINE Alu -15 298 1 2241 209 24 20 chr2 124514902 124515255 -128741328 - L1M4 LINE L1 -4788 1858 1494 1264 212 35 128 chr2 124515255 124515770 -128740813 - MLT1C LTR MaLR 0 467 1 2241 209 24 20 chr2 124515770 124516066 -128740517 - L1M4 LINE L1 -5152 1494 1201 508 200 0 0 chr2 124516076 124516166 -128740417 - AluJ SINE Alu -13 299 210 835 167 13 13 chr2 124516166 124516316 -128740267 - AluJ SINE Alu -162 150 1 4280 217 76 50 chr2 124516317 124516489 -128740094 - L1M4 LINE L1 -5327 1215 1049 3176 53 15 20 chr2 124516489 124516887 -128739696 + L1PA8 LINE L1 5775 6170 -2 4280 217 76 50 chr2 124516887 124517158 -128739425 - L1M4 LINE L1 -5493 1049 787 1804 125 32 21 chr2 124517158 124517476 -128739107 - AluSx SINE Alu 0 321 1 4280 217 76 50 chr2 124517476 124517806 -128738777 - L1M4 LINE L1 -5755 787 467 2003 138 3 0 chr2 124517806 124518110 -128738473 - AluSx SINE Alu 0 305 1 4280 217 76 50 chr2 124518110 124518504 -128738079 - L1M4 LINE L1 -6075 467 13 295 172 0 17 chr2 124518568 124518626 -128737957 + MARNA DNA Mariner 303 359 -227 2259 119 0 0 chr2 124518787 124519097 -128737486 - AluSx SINE Alu -2 310 1 396 314 8 8 chr2 124519111 124519232 -128737351 - MIR SINE MIR -113 149 29 338 230 89 89 chr2 124519508 124519568 -128737015 - MIR3 SINE MIR -6 202 143 2216 102 7 7 chr2 124519568 124519872 -128736711 - AluSx SINE Alu -8 304 1 338 230 89 89 chr2 124519872 124519946 -128736637 - MIR3 SINE MIR -64 144 68 267 282 24 0 chr2 124520052 124520137 -128736446 + MER5A DNA MER1_type 9 95 -94 2257 111 7 0 chr2 124521021 124521327 -128735256 - AluSp SINE Alu -5 308 1 2090 77 0 25 chr2 124521347 124521658 -128734925 - AluSc SINE Alu 0 315 12 338 212 13 133 chr2 124522012 124522118 -128734465 + L3 LINE CR1 1209 1293 -284 512 209 68 79 chr2 124522118 124522295 -128734288 + MER69A DNA AcHobo 2 176 -1 338 212 13 133 chr2 124522295 124522339 -128734244 + L3 LINE CR1 1293 1341 -236 2255 74 10 7 chr2 124522443 124522740 -128733843 - AluSg SINE Alu -12 298 1 477 243 158 25 chr2 124522763 124522965 -128733618 + MLT1L LTR MaLR 10 238 -377 460 271 63 78 chr2 124523016 124523300 -128733283 + MLT1L LTR MaLR 232 605 0 2206 115 0 0 chr2 124523590 124523885 -128732698 - AluSx SINE Alu -17 295 1 186 71 0 0 chr2 124524207 124524235 -128732348 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 801 144 0 16 chr2 124524235 124524355 -128732228 - AluSp/q SINE Alu -32 281 164 526 191 43 0 chr2 124524351 124524445 -128732138 - AluJb SINE Alu -196 116 19 * 2246 110 14 0 chr2 124524470 124524762 -128731821 - AluSx SINE Alu -16 296 1 262 162 242 30 chr2 124524787 124524886 -128731697 - L1MC5 LINE L1 -71 7890 7771 550 167 143 8 chr2 124524967 124525093 -128731490 + L1MB7 LINE L1 6041 6183 -1 437 264 29 7 chr2 124525141 124525281 -128731302 + MLT1H LTR MaLR 91 233 -316 934 225 136 45 chr2 124525548 124525813 -128730770 + L2 LINE L2 2726 2965 -348 2329 78 0 0 chr2 124525813 124526108 -128730475 - AluSc SINE Alu -14 295 1 934 225 136 45 chr2 124526108 124526389 -128730194 + L2 LINE L2 2965 3312 -1 292 269 194 21 chr2 124526392 124526578 -128730005 + L2 LINE L2 3024 3241 -72 311 313 96 66 chr2 124528261 124528752 -128727831 - L2 LINE L2 -14 3258 2776 2309 58 20 14 chr2 124528940 124529235 -128727348 + AluY SINE Alu 1 297 -14 685 189 27 0 chr2 124529237 124529348 -128727235 - AluJo/FLAM SINE Alu -197 115 2 920 198 158 43 chr2 124529555 124529833 -128726750 + AluSx SINE Alu 1 310 -2 236 309 85 49 chr2 124529836 124530046 -128726537 - L1ME LINE L1 -307 5814 5592 2122 112 7 7 chr2 124530046 124530350 -128726233 + AluSq SINE Alu 1 304 -9 236 309 85 49 chr2 124530350 124530385 -128726198 - L1ME LINE L1 -529 5592 5560 273 231 31 0 chr2 124530556 124530621 -128725962 - Alu SINE Alu -4 296 230 419 255 221 26 chr2 124530968 124531199 -128725384 - HAL1 LINE L1 -6 2501 2226 461 195 134 27 chr2 124531236 124531385 -128725198 - HAL1 LINE L1 -340 2167 2003 1122 96 6 0 chr2 124531706 124531862 -128724721 - AluY SINE Alu -22 289 133 2387 53 3 23 chr2 124531862 124532165 -128724418 - AluY SINE Alu -14 297 1 23 33 0 0 chr2 124532404 124532434 -128724149 + AT_rich Low_complexity Low_complexity 1 30 0 1775 175 10 7 chr2 124532536 124532844 -128723739 - AluJo SINE Alu -3 309 1 2227 96 14 0 chr2 124534956 124535249 -128721334 + AluSx SINE Alu 1 297 -15 2228 91 7 0 chr2 124535259 124535545 -128721038 + AluSg SINE Alu 1 288 -22 14690 83 12 18 chr2 124536084 124538356 -128718227 - L1PA7 LINE L1 -3 6151 3890 2326 77 3 13 chr2 124538356 124538655 -128717928 - AluY SINE Alu -15 296 1 14690 83 12 18 chr2 124538655 124539282 -128717301 - L1PA7 LINE L1 -2264 3890 3261 1209 91 0 16 chr2 124539282 124539459 -128717124 - L1P LINE L1 -3833 2313 2138 3474 191 58 36 chr2 124539540 124540087 -128716496 + L1MB8 LINE L1 4496 5030 -1148 767 89 0 16 chr2 124540087 124540210 -128716373 - L1MA4 LINE L1 -5 6295 6175 3474 191 58 36 chr2 124540210 124540248 -128716335 + L1MB8 LINE L1 5030 5066 -1112 1987 123 3 3 chr2 124540248 124540561 -128716022 - AluSx SINE Alu 0 313 1 3474 191 58 36 chr2 124540561 124541468 -128715115 + L1MB8 LINE L1 5066 6034 -144 763 176 0 23 chr2 124541468 124541599 -128714984 - FLAM_A SINE Alu -5 128 1 3474 191 58 36 chr2 124541599 124541740 -128714843 + L1MB8 LINE L1 6034 6170 -8 2338 67 13 29 chr2 124541740 124542056 -128714527 - AluSq SINE Alu -2 311 1 1366 208 7 11 chr2 124542145 124542414 -128714169 + AluJo SINE Alu 1 268 -44 212 129 0 0 chr2 124542860 124542891 -128713692 + L2 LINE L2 3261 3291 -22 1559 152 3 102 chr2 124543052 124543367 -128713216 - AluSx SINE Alu -7 305 22 2285 162 26 9 chr2 124543474 124543894 -128712689 + HUERS-P1 LTR ERV1 5837 6263 0 1974 170 25 92 chr2 124543894 124544448 -128712135 + LTR8 LTR ERV1 1 517 -174 2153 127 0 3 chr2 124544448 124544747 -128711836 - AluSx SINE Alu -14 298 1 22 35 0 0 chr2 124544749 124544778 -128711805 + AT_rich Low_complexity Low_complexity 1 29 0 2211 88 28 0 chr2 124544778 124545061 -128711522 - AluSq SINE Alu -22 291 1 1194 118 27 0 chr2 124545061 124545247 -128711336 + LTR8 LTR ERV1 501 691 0 693 158 0 47 chr2 124545745 124545872 -128710711 + FLAM_C SINE Alu 5 125 -18 225 231 0 19 chr2 124545901 124545953 -128710630 - L2 LINE L2 -302 2970 2920 2104 109 17 0 chr2 124545993 124546287 -128710296 + AluSq SINE Alu 1 299 -14 464 91 0 114 chr2 124547294 124547317 -128709266 + MADE1 DNA Mariner 3 27 -53 2358 95 3 3 chr2 124547317 124547622 -128708961 + AluSq SINE Alu 1 305 -8 464 91 0 114 chr2 124547622 124547686 -128708897 + MADE1 DNA Mariner 27 80 0 1781 175 7 7 chr2 124547706 124547997 -128708586 + AluJb SINE Alu 3 293 -19 1143 202 112 8 chr2 124548473 124548563 -128708020 + AluJb SINE Alu 2 81 -221 228 35 0 0 chr2 124548563 124548592 -128707991 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1143 202 112 8 chr2 124548592 124548759 -128707824 + AluJb SINE Alu 81 286 -16 216 398 93 0 chr2 124548941 124549059 -128707524 + L2 LINE L2 2931 3059 -254 838 158 0 8 chr2 124549164 124549291 -128707292 - FLAM_C SINE Alu -17 126 1 512 226 57 8 chr2 124549292 124549416 -128707167 + L2 LINE L2 3179 3308 -5 957 148 13 7 chr2 124549433 124549582 -128707001 + FAM SINE Alu 18 167 -18 4158 196 66 26 chr2 124550798 124551426 -128705157 + L1MB4 LINE L1 4060 4661 -1519 848 165 0 0 chr2 124551426 124551559 -128705024 + FLAM_C SINE Alu 1 133 0 4158 196 66 26 chr2 124551559 124552383 -128704200 + L1MB4 LINE L1 4661 5609 -571 1722 148 72 0 chr2 124552383 124552660 -128703923 + AluSx SINE Alu 1 297 -15 4158 196 66 26 chr2 124552660 124553042 -128703541 + L1MB4 LINE L1 5609 5974 -206 1149 181 17 31 chr2 124553045 124553333 -128703250 + L1MB4 LINE L1 5874 6157 -23 2450 89 3 0 chr2 124553436 124553740 -128702843 + AluSp SINE Alu 1 305 -8 24 32 0 0 chr2 124553960 124553991 -128702592 + AT_rich Low_complexity Low_complexity 1 31 0 288 283 20 56 chr2 124554205 124554403 -128702180 + HAL1b LINE L1 378 568 -780 1247 134 32 76 chr2 124554868 124555211 -128701372 - Charlie1 DNA MER1_type -52 2709 2382 344 286 0 0 chr2 124555216 124555286 -128701297 - Charlie1 DNA MER1_type -2690 71 2 346 256 37 92 chr2 124556146 124556310 -128700273 + MER5A DNA MER1_type 35 189 0 241 225 62 25 chr2 124556366 124556446 -128700137 + MIR3 SINE MIR 123 205 -3 477 0 0 0 chr2 124556887 124556940 -128699643 + (TG)n Simple_repeat Simple_repeat 2 54 0 238 243 14 14 chr2 124557076 124557150 -128699433 + L1ME LINE L1 5757 5830 -291 2122 118 0 55 chr2 124557150 124557480 -128699103 + AluSx SINE Alu 1 312 0 856 166 0 59 chr2 124557480 124557649 -128698934 + AluJo/FRAM SINE Alu 134 292 -20 1948 137 24 7 chr2 124557756 124558049 -128698534 + AluJo SINE Alu 1 298 -14 192 258 333 0 chr2 124558176 124558269 -128698314 + L2 LINE L2 3182 3305 -8 540 249 106 21 chr2 124559311 124559548 -128697035 - L1MC4 LINE L1 -146 7896 7640 38234 66 9 11 chr2 124559564 124565716 -128690867 - L1PA5 LINE L1 -5 6149 4 2128 136 0 0 chr2 124565723 124566018 -128690565 - AluSg SINE Alu -15 295 1 1432 203 52 14 chr2 124566018 124566670 -128689913 - L1MC4 LINE L1 -390 7652 6815 321 246 84 52 chr2 124566686 124566877 -128689706 - L1MC4 LINE L1 -1377 6665 6469 25 0 0 0 chr2 124566966 124566991 -128689592 + AT_rich Low_complexity Low_complexity 1 25 0 2050 172 65 0 chr2 124567249 124567679 -128688904 - L1MB7 LINE L1 -29 6155 5698 1177 161 40 5 chr2 124567679 124567878 -128688705 + AluJo SINE Alu 1 206 -106 1669 150 42 8 chr2 124567882 124568392 -128688191 - L1MB7 LINE L1 -609 5575 5035 983 101 14 0 chr2 124568392 124568530 -128688053 - AluSc SINE Alu -16 293 154 3976 184 55 123 chr2 124568533 124568749 -128687834 - L1MB7 LINE L1 -1144 5002 4773 2090 121 14 0 chr2 124568749 124569046 -128687537 - AluSp SINE Alu -12 301 1 3976 184 55 123 chr2 124569046 124569365 -128687218 - L1MB7 LINE L1 -1373 4773 4434 1055 73 0 0 chr2 124569365 124569501 -128687082 - AluY SINE Alu -4 307 172 3976 184 55 123 chr2 124569501 124570190 -128686393 - L1MB7 LINE L1 -1712 4434 3700 2046 140 3 0 chr2 124570190 124570483 -128686100 - AluSx SINE Alu -18 294 1 3976 184 55 123 chr2 124570483 124570780 -128685803 - L1MB7 LINE L1 -2446 3700 3455 1805 156 27 3 chr2 124570780 124571075 -128685508 - AluJb SINE Alu -10 302 1 236 218 50 69 chr2 124571089 124571190 -128685393 + MER94 DNA DNA 33 131 -3 1469 164 52 61 chr2 124572051 124572361 -128684222 - AluJb SINE Alu -5 307 1 368 294 16 0 chr2 124572521 124572647 -128683936 - Charlie8 DNA MER1_type -2198 219 92 3731 203 48 46 chr2 124572681 124573506 -128683077 + L1MD2 LINE L1 4472 5293 -1066 1497 140 86 7 chr2 124573506 124573785 -128682798 + AluJb SINE Alu 1 301 -11 3731 203 48 46 chr2 124573785 124574771 -128681812 + L1MD2 LINE L1 5293 6342 -17 2188 127 0 19 chr2 124574910 124575095 -128681488 - AluSx SINE Alu -3 309 131 2772 7 0 3 chr2 124575095 124575402 -128681181 - AluYa5 SINE Alu -5 306 1 2188 127 0 19 chr2 124575402 124575531 -128681052 - AluSx SINE Alu -181 131 1 316 254 127 0 chr2 124575930 124576056 -128680527 + L1M4 LINE L1 4076 4217 -1929 338 231 113 62 chr2 124576282 124576442 -128680141 - L1ME LINE L1 -380 5741 5574 2087 139 3 7 chr2 124576937 124577240 -128679343 + AluSx SINE Alu 1 302 -10 919 91 0 15 chr2 124577406 124577538 -128679045 + L1PA15 LINE L1 6032 6161 -4 2361 81 16 3 chr2 124577543 124577850 -128678733 + AluSq SINE Alu 1 311 -2 1249 206 35 43 chr2 124579011 124579293 -128677290 - AluJo SINE Alu -25 287 8 2359 79 3 13 chr2 124579392 124579697 -128676886 - AluSx SINE Alu -10 302 1 287 193 64 46 chr2 124580088 124580197 -128676386 - L1ME4a LINE L1 -18 6103 5993 300 306 189 21 chr2 124580307 124580598 -128675985 - L1ME4a LINE L1 -260 5861 5522 317 25 0 0 chr2 124580897 124580937 -128675646 - L1P3 LINE L1 -6418 43 4 2869 88 0 2 chr2 124581860 124582496 -128674087 + L1P3 LINE L1 1 713 -5748 2279 193 39 41 chr2 124582490 124582727 -128673856 + L1P LINE L1 2097 2333 -3813 * 2324 115 0 0 chr2 124582727 124583040 -128673543 + AluSp SINE Alu 1 313 0 2279 193 39 41 chr2 124583040 124583439 -128673144 + L1P LINE L1 2333 2732 -3414 415 287 82 0 chr2 124583542 124583664 -128672919 + L3 LINE CR1 1425 1556 -21 676 264 6 12 chr2 124583995 124584158 -128672425 - MER5B DNA MER1_type -3 175 14 201 191 24 0 chr2 124586499 124586541 -128670042 - MIR SINE MIR 0 262 220 15096 155 34 39 chr2 124586555 124593942 -128662641 + L1MA3 LINE L1 13 7724 0 1361 190 13 0 chr2 124594033 124594265 -128662318 + MER46A DNA MER2_type 2 236 0 304 355 48 0 chr2 124594824 124594948 -128661635 + L3 LINE CR1 681 810 -767 742 281 172 29 chr2 124595092 124595534 -128661049 + L3 LINE CR1 1071 1575 -2 180 0 0 0 chr2 124595604 124595624 -128660959 + (A)n Simple_repeat Simple_repeat 1 20 0 465 136 37 0 chr2 124595627 124595708 -128660875 - L1MB3 LINE L1 -13 6170 6087 723 244 78 6 chr2 124596092 124596272 -128660311 - MER58A DNA MER1_type -22 202 10 23 33 0 0 chr2 124597355 124597385 -128659198 + AT_rich Low_complexity Low_complexity 1 30 0 790 228 59 10 chr2 124597394 124597596 -128658987 + MIR SINE MIR 42 253 -9 1847 189 77 6 chr2 124597639 124597978 -128658605 + MLT1A1 LTR MaLR 1 363 -2 1972 215 92 19 chr2 124598026 124598593 -128657990 + L1MB7 LINE L1 3441 4048 -2098 973 271 148 9 chr2 124598595 124599026 -128657557 + L1MB7 LINE L1 5451 5941 -243 2070 131 3 7 chr2 124599207 124599505 -128657078 + AluSx SINE Alu 2 298 -14 1631 173 7 11 chr2 124600609 124600887 -128655696 + AluJo SINE Alu 2 278 -34 2119 95 61 3 chr2 124600902 124601197 -128655386 + AluSx SINE Alu 1 312 0 318 274 76 25 chr2 124601395 124601552 -128655031 - L1M4 LINE L1 -1233 4913 4749 466 157 111 19 chr2 124601701 124601809 -128654774 - L1MB7 LINE L1 -16 6168 6051 3471 178 51 16 chr2 124602240 124602932 -128653651 - L1MB7 LINE L1 -151 6033 5318 3397 200 54 69 chr2 124602927 124603645 -128652938 - L1MB7 LINE L1 0 6995 6268 * 1891 158 7 13 chr2 124603645 124603949 -128652634 - AluJo SINE Alu -10 302 1 3397 200 54 69 chr2 124603949 124604067 -128652516 - L1MB7 LINE L1 -727 6268 6150 1610 177 9 64 chr2 124604067 124604394 -128652189 - AluJo SINE Alu -3 309 1 3397 200 54 69 chr2 124604394 124604791 -128651792 - L1MB7 LINE L1 -845 6150 5791 1770 95 95 18 chr2 124604793 124605086 -128651497 + AluY SINE Alu 1 311 0 821 197 66 5 chr2 124605087 124605285 -128651298 + L1 LINE L1 4261 4470 -1676 571 84 0 0 chr2 124605288 124605359 -128651224 - Alu SINE Alu -246 72 2 2343 114 0 0 chr2 124605361 124605667 -128650916 - AluSq SINE Alu -7 306 1 5457 216 94 51 chr2 124605669 124606219 -128650364 - L1MB7 LINE L1 -1887 5070 4545 470 200 0 12 chr2 124606219 124606304 -128650279 - AluJ/FLAM SINE Alu -228 84 1 5457 216 94 51 chr2 124606304 124607898 -128648685 - L1MB7 LINE L1 -2412 4545 3021 2290 82 0 20 chr2 124607898 124608215 -128648368 - AluSp SINE Alu 0 311 1 5457 216 94 51 chr2 124608215 124608395 -128648188 - L1MB7 LINE L1 -3936 3021 2850 2490 64 0 0 chr2 124608395 124608691 -128647892 + AluY SINE Alu 1 296 -15 5457 216 94 51 chr2 124608691 124609551 -128647032 - L1MB7 LINE L1 -4107 2850 1653 4370 204 79 0 chr2 124609573 124610447 -128646136 + L1PA13 LINE L1 150 1092 -5695 14102 168 12 11 chr2 124610448 124611237 -128645346 + L1PA13 LINE L1 3047 3834 -2963 1841 161 3 13 chr2 124611237 124611548 -128645035 + AluSx SINE Alu 1 308 -4 14102 168 12 11 chr2 124611548 124612893 -128643690 + L1PA13 LINE L1 3834 5185 -1612 2311 83 3 3 chr2 124612893 124613194 -128643389 + AluY SINE Alu 1 301 -10 14102 168 12 11 chr2 124613194 124613591 -128642992 + L1PA13 LINE L1 5185 5580 -1217 2447 139 30 25 chr2 124613591 124613976 -128642607 + L1PA13 LINE L1 6407 6804 -10 285 264 124 0 chr2 124613976 124614105 -128642478 - L1MB7 LINE L1 -5207 1652 1508 2136 158 25 5 chr2 124614157 124614525 -128642058 - L1M1 LINE L1 -549 5751 5377 1869 158 10 3 chr2 124614846 124615143 -128641440 + AluJb SINE Alu 1 299 -13 2373 133 12 18 chr2 124615393 124615732 -128640851 + MER1B DNA MER1_type 1 337 0 503 202 34 0 chr2 124615775 124615864 -128640719 - FLAM_C SINE Alu -38 105 14 229 189 94 19 chr2 124615866 124615919 -128640664 + L2 LINE L2 3251 3307 -6 261 367 23 16 chr2 124616403 124616531 -128640052 - L2 LINE L2 -7 3306 3178 1407 204 14 11 chr2 124616724 124617003 -128639580 + AluJo SINE Alu 1 280 -32 1661 167 32 4 chr2 124617423 124617704 -128638879 + AluJo SINE Alu 1 289 -23 21 0 0 0 chr2 124617705 124617726 -128638857 + AT_rich Low_complexity Low_complexity 1 21 0 629 183 38 70 chr2 124618196 124618382 -128638201 - MER5A DNA MER1_type -7 182 3 1828 109 67 0 chr2 124618553 124618820 -128637763 - AluSc SINE Alu -18 291 7 397 305 23 38 chr2 124620856 124620987 -128635596 - L2 LINE L2 -2 3311 3183 926 305 34 25 chr2 124621217 124621663 -128634920 + L1ME3A LINE L1 4781 5230 -916 271 250 0 0 chr2 124621665 124621721 -128634862 + CT-rich Low_complexity Low_complexity 2 57 0 1643 259 98 10 chr2 124621747 124622312 -128634271 + L1ME3A LINE L1 5244 5870 -300 1982 251 75 23 chr2 124622312 124622869 -128633714 - MLT1E LTR MaLR 0 593 8 682 256 17 6 chr2 124622918 124623094 -128633489 + L1ME3A LINE L1 5973 6150 -20 221 98 78 78 chr2 124623100 124623151 -128633432 - MER5B DNA MER1_type -45 133 83 3605 260 90 66 chr2 124623181 124625065 -128631518 + HAL1 LINE L1 94 2022 -485 634 178 0 0 chr2 124625068 124625169 -128631414 + FLAM_A SINE Alu 35 135 -7 562 254 141 5 chr2 124625193 124625413 -128631170 + HAL1 LINE L1 2029 2278 -229 556 183 197 28 chr2 124625456 124625598 -128630985 - MER5A DNA MER1_type -20 169 4 273 255 108 57 chr2 124625605 124625762 -128630821 + HAL1 LINE L1 2334 2498 -9 1353 200 25 11 chr2 124625781 124626066 -128630517 - AluJo SINE Alu -22 290 2 1967 137 0 29 chr2 124626262 124626568 -128630015 + AluJb SINE Alu 1 297 -15 238 170 0 43 chr2 124630143 124630190 -128626393 - MER58 DNA MER1_type -1 2419 2375 351 273 109 0 chr2 124632467 124632577 -128624006 - MIR3 SINE MIR -9 199 78 1857 142 31 7 chr2 124633092 124633381 -128623202 + AluJb SINE Alu 1 296 -16 357 161 161 11 chr2 124633698 124633791 -128622792 + MIR SINE MIR 110 216 -46 6846 58 15 2 chr2 124634745 124636008 -128620575 + L1PA5 LINE L1 4856 6132 -22 434 298 26 20 chr2 124636661 124636812 -128619771 + MIR3 SINE MIR 20 171 -37 305 234 104 0 chr2 124637418 124637495 -128619088 + MIR SINE MIR 121 205 -57 1639 215 43 43 chr2 124639584 124640045 -128616538 + MLT1C LTR MaLR 7 467 0 912 103 0 29 chr2 124641036 124641172 -128615411 + FLAM_C SINE Alu 1 132 -11 232 203 14 0 chr2 124641559 124641628 -128614955 - L1ME4a LINE L1 -6 6115 6046 276 295 0 13 chr2 124642092 124642170 -128614413 - MER113 DNA MER1_type? 0 521 445 2128 91 10 10 chr2 124642292 124642599 -128613984 + AluY SINE Alu 1 307 -4 228 191 167 95 chr2 124642603 124642652 -128613931 - MER113 DNA MER1_type? -431 90 46 466 212 9 35 chr2 124642652 124642765 -128613818 - MER81 DNA DNA 0 114 5 228 191 167 95 chr2 124642765 124642799 -128613784 - MER113 DNA MER1_type? -475 46 1 236 329 53 0 chr2 124642981 124643057 -128613526 - L2 LINE L2 -3 3310 3231 332 318 188 35 chr2 124643210 124643556 -128613027 - L2 LINE L2 -463 2851 2453 9691 25 6 3 chr2 124643784 124645677 -128610906 + L1PA3 LINE L1 4253 6147 -8 926 178 19 161 chr2 124645894 124646073 -128610510 + L1 LINE L1 2430 2534 -3612 2045 98 13 16 chr2 124646073 124646379 -128610204 + AluSx SINE Alu 1 305 -7 926 178 19 161 chr2 124646379 124646559 -128610024 + L1 LINE L1 2534 2738 -3408 1601 156 54 45 chr2 124646568 124646921 -128609662 + MLT1A1 LTR MaLR 10 365 0 875 122 0 0 chr2 124646982 124647105 -128609478 + FRAM SINE Alu 24 146 -30 2700 222 106 29 chr2 124647125 124647444 -128609139 + L1 LINE L1 2769 3062 -3084 2364 87 0 3 chr2 124647444 124647756 -128608827 + AluY SINE Alu 1 311 0 2700 222 106 29 chr2 124647756 124648342 -128608241 + L1 LINE L1 3062 3748 -2398 2159 88 7 10 chr2 124648342 124648639 -128607944 + AluSc SINE Alu 1 296 -13 2700 222 106 29 chr2 124648639 124648796 -128607787 + L1 LINE L1 3748 3892 -2254 257 146 73 18 chr2 124648957 124649012 -128607571 + Charlie1 DNA MER1_type 1466 1523 -1238 2308 180 35 2 chr2 124649504 124649959 -128606624 + L1MB5 LINE L1 5697 6166 -8 3258 242 48 19 chr2 124649983 124651013 -128605570 + L1M4 LINE L1 2366 3425 -2721 2730 192 74 61 chr2 124651110 124652109 -128604474 + L1MB4 LINE L1 484 1514 -5028 791 116 0 0 chr2 124652109 124652221 -128604362 + HY1 scRNA scRNA 1 112 0 2730 192 74 61 chr2 124652221 124652415 -128604168 + L1MB4 LINE L1 1514 1704 -4838 2636 31 3 0 chr2 124652408 124652726 -128603857 + L1P LINE L1 4945 5263 -883 * 3764 192 65 47 chr2 124652828 124653312 -128603271 + L1MB4 LINE L1 4704 5178 -1500 351 0 0 0 chr2 124653312 124653351 -128603232 + (CA)n Simple_repeat Simple_repeat 2 40 0 3764 192 65 47 chr2 124653351 124654131 -128602452 + L1MB4 LINE L1 5178 6011 -667 1811 111 0 11 chr2 124654131 124654450 -128602133 - AluSc SINE Alu 0 328 13 3764 192 65 47 chr2 124654450 124655113 -128601470 + L1MB4 LINE L1 6011 6661 -17 198 103 0 0 chr2 124655113 124655142 -128601441 + (CA)n Simple_repeat Simple_repeat 2 30 0 2162 103 0 7 chr2 124655175 124655476 -128601107 + AluSx SINE Alu 1 299 -13 280 281 242 13 chr2 124655502 124655733 -128600850 + MLT1L LTR MaLR 203 486 -129 1148 168 23 9 chr2 124655733 124655947 -128600636 + AluJb SINE Alu 86 302 -10 1658 107 15 101 chr2 124656063 124656399 -128600184 + AluSq SINE Alu 1 307 -6 1970 105 0 0 chr2 124656594 124656860 -128599723 + AluSx SINE Alu 34 299 -13 2301 57 7 10 chr2 124657077 124657373 -128599210 + AluY SINE Alu 1 295 -16 2150 47 7 20 chr2 124659273 124659573 -128597010 + AluY SINE Alu 1 296 -15 2300 82 0 3 chr2 124662506 124662811 -128593772 + AluY SINE Alu 1 304 -7 274 299 121 31 chr2 124664410 124664634 -128591949 - ERVL LTR ERVL -466 5298 5055 264 86 0 0 chr2 124664665 124664700 -128591883 + ERVL LTR ERVL 5036 5070 -694 22 35 0 0 chr2 124665238 124665267 -128591316 + GC_rich Low_complexity Low_complexity 1 29 0 2165 95 6 19 chr2 124667697 124668013 -128588570 - AluSp SINE Alu 0 313 2 355 319 67 0 chr2 124668526 124668645 -128587938 - L2 LINE L2 0 3272 3146 265 195 0 0 chr2 124671097 124671138 -128585445 + Charlie1 DNA MER1_type 14 54 -2707 1372 205 72 9 chr2 124671160 124671506 -128585077 + Charlie1 DNA MER1_type 2394 2761 0 1304 71 0 36 chr2 124672966 124673162 -128583421 + AluY SINE Alu 1 189 -122 188 263 303 10 chr2 124674673 124674772 -128581811 + MIR SINE MIR 22 149 -113 200 308 145 34 chr2 124674901 124675018 -128581565 + L2 LINE L2 3114 3243 -29 194 67 67 0 chr2 124675306 124675336 -128581247 - MIR SINE MIR -62 146 115 231 286 39 39 chr2 124675534 124675611 -128580972 - L2 LINE L2 -4 3309 3233 327 235 92 34 chr2 124675736 124675855 -128580728 - L1ME4a LINE L1 -24 6097 5972 264 256 110 0 chr2 124675919 124676001 -128580582 + HsTC2 DNA Tc2 11 101 -1797 405 279 95 68 chr2 124676018 124676312 -128580271 - L1MEd LINE L1 -5488 631 330 313 284 0 0 chr2 124676348 124676422 -128580161 + HsTC2 DNA Tc2 1825 1898 0 1303 224 132 0 chr2 124676659 124676963 -128579620 + Tigger7 DNA MER2_type 1 344 -2143 997 141 0 7 chr2 124676958 124677107 -128579476 + Tigger7 DNA MER2_type 2339 2486 -1 * 2025 123 13 3 chr2 124677149 124677458 -128579125 - AluSx SINE Alu 0 312 1 22 0 0 0 chr2 124677780 124677802 -128578781 + AT_rich Low_complexity Low_complexity 1 22 0 304 273 127 34 chr2 124678298 124678503 -128578080 + L2 LINE L2 2715 2938 -376 647 244 154 15 chr2 124678919 124679120 -128577463 + MIR SINE MIR 14 242 -20 362 217 62 137 chr2 124679316 124679485 -128577098 + MER5B DNA MER1_type 19 164 -14 1988 121 4 0 chr2 124680198 124680498 -128576085 + AluSx SINE Alu 1 301 0 229 154 26 0 chr2 124680965 124681004 -128575579 + L2 LINE L2 3255 3294 -19 191 246 87 29 chr2 124681020 124681089 -128575494 + MIR SINE MIR 12 84 -178 530 156 18 46 chr2 124681199 124681308 -128575275 + MLT1B LTR MaLR 269 385 0 2356 54 0 13 chr2 124681336 124681634 -128574949 - AluY SINE Alu -17 294 1 7084 61 4 7 chr2 124681904 124683021 -128573562 + L1PA7 LINE L1 5040 6154 0 229 154 26 0 chr2 124683572 124683611 -128572972 - L2 LINE L2 -19 3294 3255 2175 103 48 30 chr2 124685415 124685746 -128570837 + MER1B DNA MER1_type 1 337 0 300 224 15 0 chr2 124686122 124686189 -128570394 - AluSp SINE Alu -118 185 118 974 191 0 6 chr2 124686239 124686412 -128570171 - AluJo SINE Alu -136 176 5 551 202 19 46 chr2 124686414 124686706 -128569877 - L1 LINE L1 -2863 3283 3041 570 141 0 30 chr2 124686706 124686805 -128569778 - FLAM_A SINE Alu -3 139 44 1719 232 40 20 chr2 124686809 124687352 -128569231 - L1 LINE L1 -3110 3036 2483 1711 134 58 0 chr2 124687490 124687767 -128568816 - AluJb SINE Alu -18 294 2 325 363 92 17 chr2 124688732 124688972 -128567611 - MIR SINE MIR 0 262 5 441 286 87 69 chr2 124689406 124689682 -128566901 + L2 LINE L2 2992 3272 0 34 24 0 0 chr2 124691071 124691112 -128565471 + GC_rich Low_complexity Low_complexity 1 41 0 202 305 19 67 chr2 124691936 124692041 -128564542 - MIR SINE MIR -77 131 32 554 301 0 13 chr2 124692118 124692271 -128564312 + MIR3 SINE MIR 21 171 -37 296 234 104 0 chr2 124692883 124692960 -128563623 + MIR SINE MIR 121 205 -57 933 103 0 29 chr2 124694349 124694485 -128562098 + FLAM_C SINE Alu 1 132 -11 680 307 141 29 chr2 124695485 124695931 -128560652 - MLT1E3 LTR MaLR -23 601 106 436 117 0 0 chr2 124696087 124696147 -128560436 + AluSp/q SINE Alu 233 292 -21 280 301 59 43 chr2 124697026 124697212 -128559371 - L2 LINE L2 -227 3045 2857 984 84 15 0 chr2 124698115 124698246 -128558337 + AluSq/x SINE Alu 5 137 -176 252 354 117 36 chr2 124698367 124698590 -128557993 + L2 LINE L2 2985 3225 -47 198 0 0 0 chr2 124700094 124700116 -128556467 + (A)n Simple_repeat Simple_repeat 1 22 0 265 299 142 22 chr2 124701748 124701882 -128554701 - MLT1L LTR MaLR -44 571 422 250 206 41 0 chr2 124702216 124702289 -128554294 + L1ME4a LINE L1 5724 5799 -322 1619 161 15 4 chr2 124702289 124702562 -128554021 - AluJo SINE Alu -10 302 27 832 149 54 40 chr2 124702565 124702713 -128553870 - AluJo SINE Alu -162 150 1 235 214 0 0 chr2 124702939 124703009 -128553574 + L1ME4a LINE L1 6046 6115 -6 431 221 10 19 chr2 124703633 124703737 -128552846 - MIR3 SINE MIR -45 163 61 427 262 19 0 chr2 124703750 124703857 -128552726 - L2 LINE L2 -11 3261 3153 343 207 9 60 chr2 124704611 124704727 -128551856 + L1PA16 LINE L1 5949 6058 -108 211 267 56 0 chr2 124705026 124705116 -128551467 - L2 LINE L2 -256 3016 2922 208 196 0 59 chr2 124707427 124707478 -128549105 - L2 LINE L2 0 3272 3225 * 382 314 101 32 chr2 124707455 124707643 -128548940 - MIR SINE MIR -33 229 29 29 47 0 0 chr2 124708046 124708089 -128548494 + GC_rich Low_complexity Low_complexity 1 43 0 264 77 0 0 chr2 124709029 124709068 -128547515 + (TG)n Simple_repeat Simple_repeat 1 39 0 234 91 0 0 chr2 124710177 124710210 -128546373 + (A)n Simple_repeat Simple_repeat 1 33 0 189 0 0 0 chr2 124710611 124710632 -128545951 + (A)n Simple_repeat Simple_repeat 1 21 0 237 83 67 17 chr2 124712507 124712567 -128544016 + AluSp/q SINE Alu 241 303 0 180 343 59 20 chr2 124712950 124713052 -128543531 - MIR SINE MIR -85 123 18 321 318 110 7 chr2 124713895 124714049 -128542534 - MIR SINE MIR -73 189 20 193 0 94 0 chr2 124714796 124714828 -128541755 + T-rich Low_complexity Low_complexity 2 36 0 1645 175 6 32 chr2 124714988 124715302 -128541281 - AluJo SINE Alu -6 306 1 670 258 52 14 chr2 124715494 124715879 -128540704 - MLT1J2 LTR MaLR 0 450 2 207 162 0 0 chr2 124716384 124716421 -128540162 + (CCCG)n Simple_repeat Simple_repeat 4 40 0 236 253 71 50 chr2 124717733 124717832 -128538751 - MIR SINE MIR -113 149 49 206 230 106 53 chr2 124717935 124718048 -128538535 - MIR3 SINE MIR -22 186 68 406 321 36 30 chr2 124720203 124720371 -128536212 + MIR SINE MIR 61 229 -33 1506 63 5 0 chr2 124721921 124722110 -128534473 + AluSq SINE Alu 1 190 -123 811 212 88 0 chr2 124722447 124722640 -128533943 + MER58A DNA MER1_type 12 221 -3 335 130 0 54 chr2 124723682 124723774 -128532809 + (T)n Simple_repeat Simple_repeat 1 87 0 192 40 0 0 chr2 124723782 124723807 -128532776 + (G)n Simple_repeat Simple_repeat 1 25 0 29 0 0 100 chr2 124723817 124723877 -128532706 + AT_rich Low_complexity Low_complexity 1 54 0 607 286 72 65 chr2 124725258 124725367 -128531216 + L2 LINE L2 2574 2681 -632 1442 186 6 61 chr2 124725367 124725679 -128530904 - AluSx SINE Alu -17 295 1 607 286 72 65 chr2 124725679 124725742 -128530841 + L2 LINE L2 2681 2742 -571 2220 97 7 7 chr2 124725742 124726042 -128530541 - AluSg SINE Alu -10 300 1 2679 133 28 21 chr2 124726042 124726464 -128530119 - MSTB LTR MaLR -1 425 1 607 286 72 65 chr2 124726464 124726797 -128529786 + L2 LINE L2 2741 3070 -243 1334 263 70 16 chr2 124726883 124727271 -128529312 - MLT1I LTR MaLR 0 409 1 322 367 127 7 chr2 124728597 124728747 -128527836 - L3b LINE CR1 -10 1573 1406 2285 132 3 21 chr2 124729587 124729974 -128526609 + MLT1B LTR MaLR 11 390 0 365 223 149 0 chr2 124730051 124730145 -128526438 + MIR SINE MIR 93 200 -62 301 279 133 49 chr2 124731829 124732055 -128524528 + L2 LINE L2 1731 1975 -1339 451 258 0 0 chr2 124732755 124732852 -128523731 + MER81 DNA DNA 1 97 -17 2281 85 0 0 chr2 124733099 124733394 -128523189 + AluSx SINE Alu 1 295 -17 484 335 125 24 chr2 124733836 124734008 -128522575 - L2 LINE L2 -3 3310 3157 2333 72 3 0 chr2 124734008 124734301 -128522282 - AluY SINE Alu -17 294 1 484 335 125 24 chr2 124734301 124734567 -128522016 - L2 LINE L2 -156 3157 2794 572 263 107 76 chr2 124734603 124735025 -128521558 - MLT1J LTR MaLR -51 460 26 1512 106 0 0 chr2 124735029 124735237 -128521346 + AluSg/x SINE Alu 105 312 0 1234 307 136 1 chr2 124735263 124735917 -128520666 - L2 LINE L2 -528 2786 2045 1625 115 0 0 chr2 124736124 124736342 -128520241 - AluSx SINE Alu -94 218 1 360 243 72 86 chr2 124737146 124737187 -128519396 + MIR SINE MIR 30 70 -192 2029 115 3 46 chr2 124737187 124737510 -128519073 + AluJb SINE Alu 2 310 -2 360 243 72 86 chr2 124737510 124737620 -128518963 + MIR SINE MIR 70 179 -83 227 303 92 0 chr2 124738307 124738383 -128518200 - L2 LINE L2 -7 3306 3224 292 272 167 9 chr2 124739322 124739436 -128517147 - MIR SINE MIR -14 248 117 2849 16 7 0 chr2 124739735 124740044 -128516539 - AluYa5 SINE Alu 0 311 1 181 333 60 30 chr2 124740342 124740510 -128516073 + L2 LINE L2 2898 3070 -202 250 364 68 0 chr2 124740598 124740716 -128515867 + L2 LINE L2 3116 3241 -31 388 304 34 20 chr2 124743176 124743324 -128513259 - MLT1J LTR MaLR -4 507 358 2315 110 7 0 chr2 124743786 124744095 -128512488 + AluSx SINE Alu 1 311 -1 1942 81 24 0 chr2 124745499 124745764 -128510819 + AluSc SINE Alu 41 309 0 954 132 7 0 chr2 124746289 124746425 -128510158 + AluJb SINE Alu 1 137 -175 2347 98 0 7 chr2 124746439 124746736 -128509847 - AluSg1 SINE Alu -14 295 1 2290 114 0 16 chr2 124747122 124747437 -128509146 - AluSq SINE Alu -1 312 3 307 253 0 0 chr2 124750797 124750872 -128505711 - MIR SINE MIR -64 144 70 603 218 0 0 chr2 124751634 124751781 -128504802 + (TG)n Simple_repeat Simple_repeat 2 148 0 225 178 0 0 chr2 124752544 124752589 -128503994 + CT-rich Low_complexity Low_complexity 2 46 0 231 157 0 0 chr2 124753006 124753057 -128503526 + (TCTG)n Simple_repeat Simple_repeat 2 52 0 859 255 50 17 chr2 124753447 124753686 -128502897 + MIR SINE MIR 8 254 -8 220 288 0 0 chr2 124753696 124753755 -128502828 + (CAT)n Simple_repeat Simple_repeat 1 59 0 4589 199 50 15 chr2 124754117 124755247 -128501336 - L1MB7 LINE L1 0 6184 4947 2079 118 45 0 chr2 124755247 124755536 -128501047 - AluY SINE Alu -9 302 1 4589 199 50 15 chr2 124755536 124756395 -128500188 - L1MB7 LINE L1 -1237 4947 4119 22 0 0 0 chr2 124757389 124757411 -128499172 + AT_rich Low_complexity Low_complexity 1 22 0 300 222 130 28 chr2 124757947 124758055 -128498528 - MIR3 SINE MIR -11 197 79 515 254 21 4 chr2 124758335 124758485 -128498098 + MIR SINE MIR 45 198 -62 * 593 278 58 40 chr2 124758481 124758704 -128497879 - MIR SINE MIR 0 262 36 690 184 30 15 chr2 124759223 124759462 -128497121 + MER58 DNA MER1_type 60 2420 0 2385 67 0 0 chr2 124759788 124760093 -128496490 + AluY SINE Alu 1 305 0 3603 163 17 27 chr2 124760101 124760848 -128495735 + L1MB3 LINE L1 5442 6181 -2 374 279 22 37 chr2 124761925 124762061 -128494522 - L2 LINE L2 -213 3059 2926 392 219 57 8 chr2 124762325 124762448 -128494135 - L1ME4a LINE L1 -11 6110 5982 334 188 12 14 chr2 124762587 124762668 -128493915 - L1ME4a LINE L1 -361 5760 5689 338 201 236 7 chr2 124762754 124762898 -128493685 - MER5A DNA MER1_type -4 185 9 247 292 14 0 chr2 124763324 124763396 -128493187 + MIR SINE MIR 115 187 -75 666 284 166 31 chr2 124763565 124764153 -128492430 - L2 LINE L2 -5 3267 2597 2157 101 14 0 chr2 124764902 124765216 -128491367 + AluSx SINE Alu 1 318 0 301 170 0 0 chr2 124765684 124765737 -128490846 - MIR SINE MIR -55 153 101 1682 133 34 77 chr2 124765737 124765782 -128490801 + AluJo SINE Alu 1 46 -266 2114 102 7 36 chr2 124765782 124766086 -128490497 - AluSx SINE Alu -17 295 1 1682 133 34 77 chr2 124766086 124766363 -128490220 + AluJo SINE Alu 46 309 -3 2446 71 7 0 chr2 124766566 124766860 -128489723 + AluSp SINE Alu 1 296 -17 1396 225 138 63 chr2 124767282 124767586 -128488997 + MLT1E LTR MaLR 1 281 -312 2103 99 41 7 chr2 124767586 124767879 -128488704 - AluSx SINE Alu -9 303 1 1396 225 138 63 chr2 124767879 124768126 -128488457 + MLT1E LTR MaLR 281 593 0 2048 127 10 3 chr2 124768492 124768814 -128487769 + AluSq SINE Alu 1 313 0 3317 169 58 5 chr2 124768815 124769471 -128487112 + L1MB3 LINE L1 5491 6181 -2 2137 77 0 77 chr2 124769479 124769790 -128486793 + AluY SINE Alu 1 287 -24 31 44 0 0 chr2 124769793 124769838 -128486745 + AT_rich Low_complexity Low_complexity 1 45 0 784 111 0 76 chr2 124769840 124769984 -128486599 + FLAM_C SINE Alu 1 133 0 247 308 104 8 chr2 124770950 124771096 -128485487 + MIR SINE MIR 37 195 -67 1894 151 7 3 chr2 124771498 124771796 -128484787 - AluJb SINE Alu -12 300 2 1374 176 178 92 chr2 124772826 124773196 -128483387 - MLT1F LTR MaLR 0 542 117 2173 97 61 19 chr2 124773196 124773556 -128483027 + THE1C LTR MaLR 1 375 0 1374 176 178 92 chr2 124773556 124773684 -128482899 - MLT1F LTR MaLR -425 117 1 299 188 38 38 chr2 124774250 124774330 -128482253 + L3 LINE CR1 1495 1574 -3 449 367 78 35 chr2 124774755 124775177 -128481406 + L2 LINE L2 2499 2938 -376 310 327 166 0 chr2 124775400 124775623 -128480960 - L2 LINE L2 -631 2683 2424 2876 116 157 145 chr2 124775631 124776491 -128480092 - pTR5 LTR ERV1 0 2438 1368 1119 104 45 0 chr2 124777888 124778042 -128478541 - AluSg/x SINE Alu -8 304 144 2458 49 0 11 chr2 124778973 124779297 -128477286 - AluY SINE Alu 0 321 1 1854 176 3 3 chr2 124780263 124780564 -128476019 + AluJo SINE Alu 1 301 -11 676 264 112 106 chr2 124781153 124782204 -128474379 + HAL1 LINE L1 706 1763 -744 309 259 54 61 chr2 124782680 124782827 -128473756 + HAL1b LINE L1 745 890 -458 228 291 112 43 chr2 124782944 124783202 -128473381 + HAL1 LINE L1 2224 2499 -8 2320 109 3 0 chr2 124783212 124783514 -128473069 + AluSq SINE Alu 1 303 -10 2300 78 0 27 chr2 124783518 124783813 -128472770 + AluY SINE Alu 1 287 -24 576 301 153 36 chr2 124784203 124784621 -128471962 + L2 LINE L2 2843 3309 -4 2205 88 48 7 chr2 124784876 124785171 -128471412 - AluSq SINE Alu -6 307 1 729 130 23 30 chr2 124787397 124787528 -128469055 - FLAM_C SINE Alu -3 130 1 198 170 21 21 chr2 124787737 124787784 -128468799 - MIR SINE MIR -70 192 146 26 0 0 0 chr2 124788812 124788838 -128467745 + AT_rich Low_complexity Low_complexity 1 26 0 4193 204 34 14 chr2 124989457 124990671 -128265912 - L1MEc LINE L1 -2986 4579 3344 2658 57 0 0 chr2 124990934 124991235 -128265348 - AluY SINE Alu -10 301 1 1072 236 94 44 chr2 124991240 124991676 -128264907 - L1MC5 LINE L1 -543 7418 6961 298 271 86 21 chr2 124992097 124992237 -128264346 + L2 LINE L2 2920 3068 -204 709 304 49 41 chr2 124993737 124993793 -128262790 + L1MC/D LINE L1 5255 5309 -2499 1814 211 42 38 chr2 124993793 124994296 -128262287 - MLT1D LTR MaLR 0 505 1 709 304 49 41 chr2 124994296 124994627 -128261956 + L1MC/D LINE L1 5309 5645 -2163 273 300 7 43 chr2 124994679 124994819 -128261764 - L2 LINE L2 -56 3257 3123 1785 216 60 9 chr2 124994825 124995260 -128261323 - MLT1C LTR MaLR -10 457 1 512 310 37 31 chr2 124995285 124995612 -128260971 - L2 LINE L2 -223 3090 2759 2070 97 3 33 chr2 124996127 124996426 -128260157 + AluY SINE Alu 22 311 0 1404 214 70 3 chr2 124996435 124996825 -128259758 - L1MC4 LINE L1 -1012 7030 6513 2294 119 0 0 chr2 124996865 124997167 -128259416 + AluSx SINE Alu 1 302 -10 826 290 69 33 chr2 124997468 124998196 -128258387 - L1MEc LINE L1 -4756 2990 2237 1433 206 69 34 chr2 124998197 124998258 -128258325 - LTR52 LTR ERVL -17 404 347 333 47 0 0 chr2 124998258 124998301 -128258282 + (CA)n Simple_repeat Simple_repeat 1 43 0 1433 206 69 34 chr2 124998301 124998618 -128257965 - LTR52 LTR ERVL -74 347 13 566 158 0 0 chr2 124998619 124998714 -128257869 + HY3 scRNA scRNA 4 98 -3 512 173 0 31 chr2 124998740 124998867 -128257716 + GA-rich Low_complexity Low_complexity 2 124 0 1580 214 19 27 chr2 124998928 124999302 -128257281 + MLT1A2 LTR MaLR 4 374 0 249 138 190 17 chr2 124999326 124999363 -128257220 - LTR52 LTR ERVL -41 380 351 273 57 0 0 chr2 124999363 124999398 -128257185 + (CA)n Simple_repeat Simple_repeat 1 35 0 249 138 190 17 chr2 124999398 124999418 -128257165 - LTR52 LTR ERVL -70 351 313 341 251 52 88 chr2 124999420 124999671 -128256912 - L1MEc LINE L1 -5016 2031 1790 189 213 149 0 chr2 125000946 125000993 -128255590 + MIR SINE MIR 154 207 -55 410 329 21 0 chr2 125001500 125001640 -128254943 + MIR SINE MIR 54 196 -66 376 252 168 0 chr2 125002662 125002793 -128253790 + L2 LINE L2 3160 3312 -1 297 284 35 0 chr2 125003177 125003276 -128253307 - MIR SINE MIR -64 144 79 281 317 185 19 chr2 125003466 125003731 -128252852 - L2 LINE L2 0 3313 3005 1059 219 108 118 chr2 125005376 125005920 -128250663 + MLT1H1 LTR MaLR 4 555 0 1583 196 0 40 chr2 125007589 125007885 -128248698 + AluJb SINE Alu 6 289 -23 249 279 70 41 chr2 125008014 125008131 -128248452 - MIR SINE MIR -86 122 3 566 265 65 0 chr2 125009174 125009374 -128247209 + LTR33 LTR ERVL 1 213 -308 193 233 22 0 chr2 125009759 125009849 -128246734 + (CA)n Simple_repeat Simple_repeat 2 93 0 2529 99 0 0 chr2 125010743 125011056 -128245527 - AluSq SINE Alu 0 313 1 190 330 54 36 chr2 125011114 125011226 -128245357 - MIR SINE MIR -67 141 28 444 308 115 24 chr2 125011741 125012235 -128244348 + L1MEc LINE L1 782 1320 -5076 348 64 0 0 chr2 125012636 125012683 -128243900 + (CA)n Simple_repeat Simple_repeat 2 48 0 281 217 0 0 chr2 125012712 125012772 -128243811 + MLT1K LTR MaLR 529 588 0 360 283 80 66 chr2 125012786 125013012 -128243571 - L1ME LINE L1 -543 5578 5350 268 309 74 19 chr2 125013834 125013996 -128242587 - HAL1b LINE L1 -786 562 392 409 302 75 51 chr2 125014101 125014468 -128242115 - L1MEd LINE L1 -2851 3278 841 822 271 55 81 chr2 125014493 125014795 -128241788 - MLT1K LTR MaLR -5 583 294 2409 82 3 28 chr2 125014795 125015114 -128241469 - AluY SINE Alu 0 311 1 822 271 55 81 chr2 125015114 125015246 -128241337 - MLT1K LTR MaLR -294 294 160 456 290 47 12 chr2 125015531 125015700 -128240883 - MLT1K LTR MaLR -410 178 4 422 274 0 24 chr2 125016157 125016281 -128240302 + MIR SINE MIR 33 153 -109 218 261 0 0 chr2 125017595 125017641 -128238942 + MIR SINE MIR 108 153 -109 491 239 22 0 chr2 125017781 125017915 -128238668 - MIR SINE MIR -65 197 61 227 154 0 19 chr2 125019173 125019225 -128237358 + GA-rich Low_complexity Low_complexity 1 51 0 1766 65 5 5 chr2 125019318 125019532 -128237051 + AluSp SINE Alu 1 214 -99 704 151 16 0 chr2 125019641 125019767 -128236816 - FLAM_C SINE Alu -5 128 1 1574 184 44 0 chr2 125019768 125020084 -128236499 - L1MB3 LINE L1 -45 6138 5809 691 258 195 3 chr2 125021088 125021375 -128235208 + MER63 DNA MER1_type 719 1060 0 492 318 25 21 chr2 125023177 125023416 -128233167 + L1MC5 LINE L1 7278 7517 -444 3419 240 88 84 chr2 125023421 125024136 -128232447 + L1MC4a LINE L1 5846 6556 -1252 396 0 0 0 chr2 125024136 125024180 -128232403 + (TG)n Simple_repeat Simple_repeat 2 45 0 3419 240 88 84 chr2 125024180 125025418 -128231165 + L1MC4a LINE L1 6556 7808 0 428 280 40 53 chr2 125025582 125025807 -128230776 + L1MC5 LINE L1 7710 7931 -30 907 166 0 14 chr2 125025813 125025958 -128230625 + FLAM_C SINE Alu 1 143 0 522 83 0 0 chr2 125027604 125027676 -128228907 + (TG)n Simple_repeat Simple_repeat 2 73 0 449 259 17 0 chr2 125027752 125027868 -128228715 + MIR SINE MIR 47 164 -98 1616 199 10 0 chr2 125027870 125028166 -128228417 + AluJo SINE Alu 1 299 -13 578 281 85 31 chr2 125029481 125029541 -128227042 + MER46C DNA MER2_type 3 58 -280 2353 118 0 0 chr2 125029541 125029854 -128226729 - AluSq SINE Alu 0 313 1 578 281 85 31 chr2 125029854 125030110 -128226473 + MER46C DNA MER2_type 58 336 -2 407 309 69 0 chr2 125030470 125030645 -128225938 - Charlie4 DNA MER1_type -3 1958 1772 1626 181 77 13 chr2 125030933 125031304 -128225279 - MLT1E1 LTR MaLR -263 370 4 242 36 0 0 chr2 125031586 125031614 -128224969 + (A)n Simple_repeat Simple_repeat 1 28 0 219 229 0 16 chr2 125032620 125032681 -128223902 + (CCCCAG)n Simple_repeat Simple_repeat 3 62 0 217 337 11 0 chr2 125033067 125033162 -128223421 - MIR SINE MIR -80 182 87 2371 97 0 0 chr2 125033340 125033640 -128222943 + AluSg1 SINE Alu 1 300 -9 275 325 41 18 chr2 125033814 125033983 -128222600 - L1ME LINE L1 -239 5882 5710 279 325 17 8 chr2 125034157 125034277 -128222306 + L1ME LINE L1 5674 5794 -368 1259 264 50 29 chr2 125034280 125034701 -128221882 - MLT1J LTR MaLR -3 508 79 245 377 97 0 chr2 125034903 125035057 -128221526 - L3 LINE CR1 -122 1455 1287 2569 81 0 0 chr2 125035547 125035855 -128220728 + AluY SINE Alu 1 308 -3 320 213 53 0 chr2 125035869 125035944 -128220639 - MER116 DNA Mariner -1 79 1 226 331 41 50 chr2 125036527 125036648 -128219935 + L2 LINE L2 3149 3268 -4 775 278 16 28 chr2 125036742 125036997 -128219586 - MLT1K LTR MaLR -77 511 260 816 150 0 0 chr2 125037158 125037291 -128219292 + FLAM_A SINE Alu 1 133 0 685 306 82 40 chr2 125038857 125039210 -128217373 + L1MC4 LINE L1 5513 5880 -1928 2335 118 0 6 chr2 125039395 125039709 -128216874 - AluSx SINE Alu 0 312 1 774 281 34 8 chr2 125040203 125040470 -128216113 + L1MC4 LINE L1 6747 7020 -1022 703 318 47 80 chr2 125040478 125040755 -128215828 + L1MC4 LINE L1 7341 7626 -416 2099 123 10 0 chr2 125040755 125041064 -128215519 - AluSx SINE Alu 0 312 1 703 318 47 80 chr2 125041064 125041383 -128215200 + L1MC4 LINE L1 7626 7917 -125 831 39 0 0 chr2 125042402 125042550 -128214033 - AluY SINE Alu 0 355 208 304 303 125 17 chr2 125043059 125043284 -128213299 - MIR SINE MIR -3 259 5 182 326 78 64 chr2 125043532 125043673 -128212910 - MIR SINE MIR -118 144 2 182 359 0 0 chr2 125043873 125043926 -128212657 + MIR SINE MIR 31 83 -125 4190 146 21 27 chr2 125044005 125044197 -128212386 + L1MB3 LINE L1 5417 5609 -574 1700 186 0 3 chr2 125044197 125044505 -128212078 + AluJb SINE Alu 2 308 0 4190 146 21 27 chr2 125044505 125045036 -128211547 + L1MB3 LINE L1 5609 6138 -45 2121 109 0 10 chr2 125045036 125045339 -128211244 + AluSx SINE Alu 1 300 -12 4190 146 21 27 chr2 125045339 125045383 -128211200 + L1MB3 LINE L1 6138 6181 -2 914 251 215 46 chr2 125045535 125045973 -128210610 + MLT1G LTR MaLR 79 590 0 316 287 97 85 chr2 125046696 125046938 -128209645 - L2 LINE L2 -77 3236 2989 2466 179 38 4 chr2 125046938 125047407 -128209176 + MER31A LTR ERV1 1 485 0 316 287 97 85 chr2 125047407 125047422 -128209161 - L2 LINE L2 -324 2989 2976 1294 163 0 97 chr2 125047439 125047645 -128208938 - AluJo SINE Alu 0 310 141 1721 167 30 0 chr2 125047645 125047944 -128208639 + AluJb SINE Alu 5 312 0 1294 163 0 97 chr2 125047944 125048053 -128208530 - AluJo SINE Alu -169 141 23 21 0 0 0 chr2 125048068 125048089 -128208494 + AT_rich Low_complexity Low_complexity 1 21 0 721 224 97 31 chr2 125048863 125049059 -128207524 - MER3 DNA MER1_type 0 209 1 857 200 32 5 chr2 125049224 125049409 -128207174 - MER20 DNA MER1_type -1 218 29 270 228 0 63 chr2 125050618 125050697 -128205886 + L2 LINE L2 2986 3059 -213 584 239 147 11 chr2 125051690 125051874 -128204709 - MIR SINE MIR -41 221 13 2168 90 3 0 chr2 125052350 125052651 -128203932 - AluSc SINE Alu -7 302 1 182 329 13 38 chr2 125053191 125053270 -128203313 + L2 LINE L2 2681 2757 -557 235 286 29 0 chr2 125053412 125053482 -128203101 + L2 LINE L2 3200 3271 -1 467 322 46 31 chr2 125053940 125054201 -128202382 + L1ME LINE L1 5500 5764 -357 1786 161 6 19 chr2 125055532 125055848 -128200735 + AluJb SINE Alu 1 312 0 476 255 19 38 chr2 125056179 125056336 -128200247 - MIR SINE MIR -4 258 105 631 193 0 0 chr2 125056359 125056468 -128200115 - AluSx SINE Alu -10 302 194 913 149 0 0 chr2 125056469 125056610 -128199973 - AluSx SINE Alu -172 141 1 762 171 51 40 chr2 125056759 125056934 -128199649 + MER5A DNA MER1_type 1 177 -12 636 239 62 23 chr2 125057062 125057238 -128199345 - MER5A DNA MER1_type 0 189 7 2298 85 3 10 chr2 125057787 125058093 -128198490 + AluSx SINE Alu 1 304 -8 254 314 131 42 chr2 125058860 125059051 -128197532 - L2 LINE L2 -80 3233 3026 360 225 45 18 chr2 125059128 125059239 -128197344 - L2 LINE L2 -926 2388 2275 214 320 20 80 chr2 125059225 125059325 -128197258 - MIR SINE MIR -144 118 25 * 1007 258 152 12 chr2 125060594 125060673 -128195910 - LTR16C LTR ERVL -15 476 409 2433 179 44 24 chr2 125060673 125061131 -128195452 - MLT1C LTR MaLR 0 467 1 1007 258 152 12 chr2 125061131 125061458 -128195125 - LTR16C LTR ERVL -82 409 13 348 349 26 0 chr2 125061802 125061954 -128194629 - L1MC4a LINE L1 -1959 5849 5694 323 330 9 9 chr2 125062394 125062503 -128194080 - MIR SINE MIR -37 225 117 244 340 14 50 chr2 125062709 125062850 -128193733 - L2 LINE L2 0 3272 3137 329 338 36 22 chr2 125063478 125063617 -128192966 - MIR3 SINE MIR -14 194 54 343 267 20 67 chr2 125063626 125063776 -128192807 - MIR SINE MIR -2 260 118 60 105 0 0 chr2 125064698 125064774 -128191809 + AT_rich Low_complexity Low_complexity 1 76 0 318 349 173 42 chr2 125064774 125065076 -128191507 - L1M4c LINE L1 -4169 2215 1811 384 272 118 15 chr2 125068026 125068162 -128188421 - MIR SINE MIR -91 171 22 2137 99 30 0 chr2 125068968 125069270 -128187313 - AluSx SINE Alu -1 311 1 180 317 38 81 chr2 125069298 125069484 -128187099 + L2 LINE L2 2885 3062 -210 291 303 18 28 chr2 125069703 125069812 -128186771 + MIR SINE MIR 20 127 -81 198 269 118 11 chr2 125070932 125071025 -128185558 - MIR SINE MIR -69 139 81 338 335 0 22 chr2 125071559 125071741 -128184842 + (TG)n Simple_repeat Simple_repeat 1 178 0 188 255 21 7 chr2 125071770 125071911 -128184672 + (TG)n Simple_repeat Simple_repeat 1 143 0 653 276 72 9 chr2 125072184 125072405 -128184178 - Charlie4a DNA MER1_type -3 505 271 1939 115 4 4 chr2 125072565 125072866 -128183717 - AluSc SINE Alu 0 301 1 218 303 10 40 chr2 125072939 125073038 -128183545 + MER5A DNA MER1_type 35 130 -59 199 241 37 0 chr2 125073834 125073888 -128182695 + MIR SINE MIR 86 141 -67 315 320 58 0 chr2 125074103 125074259 -128182324 - L2 LINE L2 -194 3078 2914 917 122 98 18 chr2 125075015 125075179 -128181404 + AluJo SINE Alu 120 296 -16 2186 122 0 3 chr2 125075184 125075496 -128181087 + AluSx SINE Alu 1 311 -1 2134 75 21 0 chr2 125075712 125076033 -128180550 + AluSp SINE Alu 1 327 0 563 250 184 38 chr2 125076164 125076484 -128180099 + L2 LINE L2 2475 2841 -473 241 301 209 36 chr2 125076536 125076732 -128179851 + L2 LINE L2 3081 3310 -3 219 231 0 0 chr2 125077658 125077697 -128178886 + polypurine Low_complexity Low_complexity 1 39 0 308 310 0 30 chr2 125078256 125078356 -128178227 - MER5A DNA MER1_type -79 110 14 180 0 0 0 chr2 125080408 125080428 -128176155 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2236 74 10 10 chr2 125080431 125080740 -128175843 - AluY SINE Alu -2 309 1 2264 94 0 0 chr2 125081066 125081363 -128175220 - AluSx SINE Alu -5 307 11 305 290 41 16 chr2 125081370 125081555 -128175028 + L1ME LINE L1 5696 5888 -233 237 309 81 13 chr2 125081683 125081832 -128174751 - MIR3 SINE MIR -16 192 34 978 179 16 0 chr2 125082769 125082953 -128173630 + MER5A DNA MER1_type 1 187 -2 523 216 273 17 chr2 125083127 125083303 -128173280 + MIR SINE MIR 13 233 -29 216 180 0 20 chr2 125083719 125083769 -128172814 - MER5B DNA MER1_type -99 79 31 286 323 150 14 chr2 125084799 125085019 -128171564 + MIR SINE MIR 2 251 -11 411 279 101 8 chr2 125085461 125085590 -128170993 - MIR3 SINE MIR -22 186 46 252 360 123 4 chr2 125087114 125087342 -128169241 + MIR SINE MIR 2 256 -6 220 303 20 40 chr2 125087450 125087602 -128168981 - L2 LINE L2 -251 3021 2873 2774 193 9 2 chr2 125088919 125089458 -128167125 + L1MB7 LINE L1 5620 6162 -22 224 185 19 0 chr2 125089466 125089520 -128167063 + GA-rich Low_complexity Low_complexity 3 57 0 438 314 132 29 chr2 125090616 125091071 -128165512 - MLT1K LTR MaLR -6 582 81 228 111 0 0 chr2 125091759 125091795 -128164788 + (TCCC)n Simple_repeat Simple_repeat 3 38 0 448 243 58 52 chr2 125091797 125091970 -128164613 - L2 LINE L2 -1 3312 3139 526 285 147 13 chr2 125093793 125094209 -128162374 - LTR16C LTR ERVL 0 491 1 1965 138 11 62 chr2 125094438 125094793 -128161790 + MER1B DNA MER1_type 1 337 0 207 0 0 0 chr2 125094895 125094918 -128161665 + (TCCTG)n Simple_repeat Simple_repeat 5 27 0 587 258 53 49 chr2 125095609 125095853 -128160730 - MLT2F LTR ERVL -2 661 417 2230 168 112 34 chr2 125096047 125096114 -128160469 - Charlie1 DNA MER1_type -1 2760 2700 2229 80 3 17 chr2 125096114 125096416 -128160167 - AluSx SINE Alu -14 298 1 2230 168 112 34 chr2 125096416 125096944 -128159639 - Charlie1 DNA MER1_type -61 2700 2118 272 271 62 0 chr2 125096985 125097081 -128159502 - Charlie1 DNA MER1_type -2611 150 49 * 327 242 102 39 chr2 125097080 125097208 -128159375 - MLT2F LTR ERVL -524 139 4 218 182 0 23 chr2 125098737 125098781 -128157802 - MIR SINE MIR -168 94 52 2159 105 10 0 chr2 125099161 125099457 -128157126 - AluSq SINE Alu -10 303 5 319 340 54 71 chr2 125099602 125099896 -128156687 - L2 LINE L2 -13 3259 2971 200 196 137 0 chr2 125101694 125101745 -128154838 - MIR SINE MIR -88 174 117 285 360 91 11 chr2 125101983 125102169 -128154414 + MIR SINE MIR 48 248 -14 236 294 103 20 chr2 125102490 125102636 -128153947 - L1ME4a LINE L1 -3 6118 5961 183 346 0 0 chr2 125104076 125104128 -128152455 - MIR SINE MIR -80 128 77 1762 152 34 0 chr2 125104732 125105028 -128151555 - AluJb SINE Alu -6 306 1 270 250 142 42 chr2 125106532 125106652 -128149931 - MIR SINE MIR -115 147 16 246 209 90 0 chr2 125106935 125107002 -128149581 + L2 LINE L2 3196 3268 -4 4315 151 18 17 chr2 125107250 125107972 -128148611 + L1MB3 LINE L1 5460 6182 -1 438 304 6 11 chr2 125108958 125109139 -128147444 + (CA)n Simple_repeat Simple_repeat 1 180 0 462 330 17 6 chr2 125109293 125109472 -128147111 + MIR SINE MIR 8 188 -74 195 204 0 0 chr2 125109856 125109900 -128146683 + (TG)n Simple_repeat Simple_repeat 2 45 0 209 132 38 57 chr2 125110215 125110268 -128146315 + L2 LINE L2 3198 3249 -23 203 161 63 35 chr2 125110711 125110885 -128145698 + (TCTCTG)n Simple_repeat Simple_repeat 2 180 0 222 193 0 0 chr2 125110968 125111025 -128145558 + CT-rich Low_complexity Low_complexity 2 58 0 188 273 0 0 chr2 125111707 125111751 -128144832 + MIR SINE MIR 169 212 -50 202 203 108 27 chr2 125112607 125112681 -128143902 + MIR SINE MIR 45 124 -84 211 261 0 45 chr2 125113001 125113089 -128143494 + CT-rich Low_complexity Low_complexity 5 88 0 296 222 52 25 chr2 125113319 125113457 -128143126 + MIR SINE MIR 40 181 -73 2351 227 41 11 chr2 125114008 125114549 -128142034 - MER74A LTR ERVL 0 558 2 2077 113 3 0 chr2 125115286 125115577 -128141006 - AluSx SINE Alu -12 300 9 276 77 0 0 chr2 125115682 125115721 -128140862 + (TG)n Simple_repeat Simple_repeat 2 40 0 28 0 0 0 chr2 125115725 125115753 -128140830 + AT_rich Low_complexity Low_complexity 1 28 0 637 238 26 13 chr2 125115835 125115986 -128140597 + MER97a DNA MER1_type? 24 176 -718 299 342 21 21 chr2 125116192 125116432 -128140151 - L1ME3A LINE L1 -231 5922 5683 303 304 11 0 chr2 125116692 125116780 -128139803 - L1ME3A LINE L1 -531 5622 5531 823 319 61 46 chr2 125116886 125117012 -128139571 - L1ME3A LINE L1 -769 5360 5237 2604 33 0 0 chr2 125117012 125117314 -128139269 + AluY SINE Alu 1 302 -9 823 319 61 46 chr2 125117314 125118416 -128138167 - L1ME3A LINE L1 -892 5237 4114 330 141 31 0 chr2 125118418 125118481 -128138102 - Charlie5 DNA MER1_type -28 2584 2520 450 65 78 13 chr2 125118481 125118550 -128138033 - MSTB2 LTR MaLR 0 457 384 1342 156 47 24 chr2 125118550 125118862 -128137721 + MER7A DNA MER2_type 1 337 0 556 165 22 0 chr2 125118862 125118945 -128137638 - MSTD LTR MaLR -69 327 243 462 318 55 20 chr2 125119342 125119456 -128137127 - L1ME3A LINE L1 -2787 3342 3233 2168 114 0 3 chr2 125119456 125119762 -128136821 - AluSx SINE Alu -7 305 1 462 318 55 20 chr2 125119762 125120050 -128136533 - L1ME3A LINE L1 -2896 3233 2926 1073 318 99 37 chr2 125120052 125120988 -128135595 - L1MEd LINE L1 -4888 1231 3 250 194 32 16 chr2 125121487 125121549 -128135034 - L2 LINE L2 -1 3312 3250 369 0 0 0 chr2 125121747 125121788 -128134795 + (TG)n Simple_repeat Simple_repeat 1 41 0 25 0 0 0 chr2 125121881 125121906 -128134677 + AT_rich Low_complexity Low_complexity 1 25 0 790 275 22 25 chr2 125122164 125122447 -128134136 - L1MC4a LINE L1 -164 5957 5688 186 232 107 0 chr2 125123152 125123208 -128133375 - MIR SINE MIR -65 143 82 2203 112 0 0 chr2 125123560 125123865 -128132718 - AluSx SINE Alu -7 305 1 761 241 92 19 chr2 125124033 125124240 -128132343 - MER58A DNA MER1_type -1 223 2 423 268 41 24 chr2 125124409 125124532 -128132051 + MIR3 SINE MIR 78 202 -6 2125 135 0 0 chr2 125124893 125125204 -128131379 + AluSx SINE Alu 1 311 -1 442 252 220 6 chr2 125125743 125125902 -128130681 - MIR SINE MIR -15 247 55 223 344 54 0 chr2 125126646 125126739 -128129844 + MIR SINE MIR 91 188 -74 255 245 0 0 chr2 125127001 125127050 -128129533 + MER81 DNA DNA 2 50 -64 439 267 17 0 chr2 125127221 125127337 -128129246 - ORSL DNA AcHobo -157 118 1 2439 144 51 5 chr2 125128839 125129250 -128127333 + L1MB3 LINE L1 5754 6183 0 309 26 0 0 chr2 125129337 125129375 -128127208 + (ATG)n Simple_repeat Simple_repeat 1 38 0 1622 315 74 24 chr2 125129506 125130192 -128126391 + HAL1 LINE L1 755 1504 -1003 282 95 0 0 chr2 125130192 125130234 -128126349 + (CAGAA)n Simple_repeat Simple_repeat 2 43 0 1622 315 74 24 chr2 125130234 125130506 -128126077 + HAL1 LINE L1 1504 1761 -746 227 291 98 75 chr2 125130698 125130952 -128125631 + HAL1 LINE L1 2215 2474 -33 251 86 0 0 chr2 125130965 125131000 -128125583 + U2 snRNA snRNA 1 35 -153 316 326 107 40 chr2 125131603 125131827 -128124756 - L2 LINE L2 -76 3237 2999 625 282 195 14 chr2 125133895 125134182 -128122401 - L2 LINE L2 -2 3270 2932 804 189 56 28 chr2 125134626 125134806 -128121777 - MER5A DNA MER1_type -4 185 1 237 322 0 44 chr2 125135204 125135294 -128121289 + MARNA DNA Mariner 171 256 -330 551 297 62 0 chr2 125135554 125135763 -128120820 - MIR SINE MIR -33 229 8 301 286 133 6 chr2 125135883 125136047 -128120536 - MIR SINE MIR -59 203 16 473 255 6 0 chr2 125137163 125137320 -128119263 + (CCCA)n Simple_repeat Simple_repeat 2 159 0 937 165 6 35 chr2 125137543 125137713 -128118870 - MSTA LTR MaLR -263 165 1 898 199 29 0 chr2 125137714 125137885 -128118698 - L1MDa LINE L1 -6242 298 123 507 318 50 5 chr2 125138497 125138698 -128117885 - MIR SINE MIR -43 219 10 229 246 0 49 chr2 125139411 125139472 -128117111 - MIR SINE MIR -94 168 111 819 305 25 21 chr2 125139651 125139887 -128116696 - L3 LINE CR1 -32 1545 1309 355 299 75 8 chr2 125140158 125140292 -128116291 - MIR SINE MIR 0 262 120 180 0 0 0 chr2 125140637 125140657 -128115926 + (GGGTG)n Simple_repeat Simple_repeat 4 23 0 358 237 111 74 chr2 125141377 125141570 -128115013 + MIR SINE MIR 5 198 -62 366 292 101 30 chr2 125141702 125141870 -128114713 - MIR SINE MIR -7 255 76 206 294 0 0 chr2 125142529 125142580 -128114003 - MIR SINE MIR -145 117 67 301 267 153 30 chr2 125142812 125142943 -128113640 - MIR3 SINE MIR -29 179 33 182 250 77 0 chr2 125143204 125143256 -128113327 + MIR3 SINE MIR 126 181 -27 370 287 47 16 chr2 125144032 125144161 -128112422 + MIR SINE MIR 48 180 -82 400 288 34 0 chr2 125144404 125144522 -128112061 + MIR SINE MIR 70 191 -71 1964 114 0 4 chr2 125144581 125144853 -128111730 + AluSx SINE Alu 29 299 -13 379 301 127 13 chr2 125145353 125145582 -128111001 - MLT1L LTR MaLR -1 614 360 304 242 0 0 chr2 125145613 125145679 -128110904 - MLT1J LTR MaLR -335 176 111 248 360 104 0 chr2 125145988 125146152 -128110431 - MIR SINE MIR -1 261 81 351 317 82 49 chr2 125146490 125146733 -128109850 + L1ME LINE L1 5444 5694 -427 225 0 0 0 chr2 125146925 125146950 -128109633 + (A)n Simple_repeat Simple_repeat 1 25 0 276 196 0 0 chr2 125147590 125147641 -128108942 + L2 LINE L2 3186 3236 -36 192 77 0 0 chr2 125147674 125147700 -128108883 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 193 304 43 0 chr2 125147700 125147769 -128108814 - L2 LINE L2 -3173 141 70 452 298 66 0 chr2 125148067 125148218 -128108365 - MIR3 SINE MIR -7 201 41 298 295 139 24 chr2 125148259 125148425 -128108158 + MIR SINE MIR 57 241 -21 774 194 48 68 chr2 125148878 125148913 -128107670 + MLT1D LTR MaLR 1 35 -470 1538 205 33 35 chr2 125148913 125149279 -128107304 - MLT1A1 LTR MaLR 0 365 1 774 194 48 68 chr2 125149279 125149585 -128106998 + MLT1D LTR MaLR 35 413 -92 402 247 84 53 chr2 125149601 125149838 -128106745 + MLT1J2 LTR MaLR 56 298 -111 227 254 34 0 chr2 125149844 125149903 -128106680 + MLT1I LTR MaLR 346 406 -3 225 333 23 11 chr2 125150850 125150937 -128105646 - Charlie6 DNA MER1_type -1165 2335 2248 2146 107 7 10 chr2 125152231 125152541 -128104042 - AluSc SINE Alu 0 309 1 345 244 118 8 chr2 125152742 125152861 -128103722 - MIR SINE MIR -85 177 46 568 230 58 0 chr2 125153334 125153473 -128103110 - MIR SINE MIR -70 192 46 294 338 79 22 chr2 125154460 125154599 -128101984 - L1MC/D LINE L1 -2059 5749 5603 217 229 0 0 chr2 125154798 125154846 -128101737 - MIR SINE MIR -80 128 81 282 306 116 0 chr2 125155062 125155209 -128101374 + L2 LINE L2 2593 2756 -558 220 309 202 6 chr2 125155335 125155513 -128101070 + L2 LINE L2 2764 2976 -338 1877 93 8 0 chr2 125155744 125156002 -128100581 + AluSg SINE Alu 37 296 -14 2114 104 0 23 chr2 125156180 125156488 -128100095 + AluSx SINE Alu 1 301 -11 2074 107 3 19 chr2 125156665 125156974 -128099609 + AluSx SINE Alu 1 304 -8 2129 120 0 7 chr2 125156977 125157285 -128099298 + AluSq SINE Alu 1 306 -7 482 202 6 0 chr2 125158122 125158300 -128098283 + (TG)n Simple_repeat Simple_repeat 1 179 0 453 199 0 0 chr2 125158368 125158529 -128098054 + (TG)n Simple_repeat Simple_repeat 1 161 0 186 268 89 0 chr2 125158613 125158669 -128097914 + L2 LINE L2 3240 3300 -13 196 256 0 0 chr2 125159038 125159081 -128097502 - L2 LINE L2 -1 3312 3270 297 323 52 0 chr2 125159521 125159617 -128096966 - L3 LINE CR1 -57 1520 1420 334 333 56 39 chr2 125160630 125160810 -128095773 + MIR SINE MIR 23 205 -57 331 239 131 39 chr2 125162291 125162421 -128094162 - MIR SINE MIR -71 191 50 194 242 273 0 chr2 125162816 125162915 -128093668 - MIR3 SINE MIR -72 136 11 180 393 57 8 chr2 125163213 125163335 -128093248 + MIR SINE MIR 16 143 -119 209 81 0 27 chr2 125163842 125163879 -128092704 + (TG)n Simple_repeat Simple_repeat 1 36 0 939 284 91 23 chr2 125166305 125166735 -128089848 - LTR33 LTR ERVL -18 503 45 311 249 72 77 chr2 125167193 125167374 -128089209 - MER113 DNA MER1_type? -336 185 6 1879 231 23 25 chr2 125167374 125167894 -128088689 + L1ME LINE L1 3568 4086 -2060 701 175 29 0 chr2 125167892 125168029 -128088554 + L1ME LINE L1 5314 5454 -712 * 1817 94 4 8 chr2 125168061 125168315 -128088268 + AluSg SINE Alu 44 296 -14 193 248 86 38 chr2 125168835 125168940 -128087643 + L2 LINE L2 2950 3059 -213 7573 42 0 1 chr2 125169236 125170406 -128086177 + L1PA5 LINE L1 4986 6151 -3 797 295 35 59 chr2 125170410 125170975 -128085608 - L1MC5 LINE L1 -274 7687 7260 22 56 0 0 chr2 125171007 125171043 -128085540 + AT_rich Low_complexity Low_complexity 1 36 0 1225 244 138 26 chr2 125171049 125171264 -128085319 - L1MC5 LINE L1 -764 7197 7008 1794 119 0 110 chr2 125171264 125171640 -128084943 - AluSx SINE Alu 0 339 1 1225 244 138 26 chr2 125171640 125171688 -128084895 - L1MC5 LINE L1 -953 7008 6967 1849 161 0 3 chr2 125171688 125171992 -128084591 - AluJo SINE Alu -1 311 9 1225 244 138 26 chr2 125171992 125172369 -128084214 - L1MC5 LINE L1 -994 6967 6479 2258 61 0 0 chr2 125172654 125172957 -128083626 + AluSc SINE Alu 2 304 0 2418 153 63 20 chr2 125173068 125173513 -128083070 - MLT1C LTR MaLR 0 467 4 326 340 10 0 chr2 125173691 125173794 -128082789 + MIR SINE MIR 132 235 -27 188 343 67 0 chr2 125173994 125174099 -128082484 - MIR SINE MIR -33 229 118 189 339 0 0 chr2 125175019 125175081 -128081502 + L2 LINE L2 3234 3295 -18 360 325 17 0 chr2 125175183 125175303 -128081280 - MIR SINE MIR 0 262 141 1305 241 85 31 chr2 125175304 125175782 -128080801 - L1MD3 LINE L1 0 7808 7310 195 243 71 29 chr2 125176762 125176832 -128079751 - MIR SINE MIR -73 189 117 215 278 0 0 chr2 125178088 125178142 -128078441 - MIR SINE MIR -76 132 79 227 200 120 27 chr2 125178197 125178272 -128078311 + MIR SINE MIR 181 262 0 428 200 0 0 chr2 125178289 125178364 -128078219 - MER116 DNA Mariner 0 80 6 550 287 120 23 chr2 125178367 125178667 -128077916 + MER113 DNA MER1_type? 85 413 -108 2213 76 0 10 chr2 125178672 125178991 -128077592 + AluSc SINE Alu 1 316 0 374 331 38 33 chr2 125179244 125179428 -128077155 - MIR3 SINE MIR -22 186 2 966 203 14 39 chr2 125179537 125179767 -128076816 - AluJo SINE Alu 0 308 84 492 281 41 14 chr2 125179899 125180045 -128076538 - MIR SINE MIR -93 169 20 290 298 191 22 chr2 125180313 125180632 -128075951 + L2 LINE L2 2593 2965 -349 232 331 66 16 chr2 125181830 125181951 -128074632 - MIR SINE MIR -8 254 128 431 136 0 0 chr2 125182183 125182249 -128074334 + L1PA16 LINE L1 6092 6157 -9 317 319 100 62 chr2 125182654 125183179 -128073404 - L2 LINE L2 0 3272 2725 319 297 40 10 chr2 125184511 125184612 -128071971 - MIR SINE MIR -71 191 88 2231 245 37 6 chr2 125184748 125185369 -128071214 - L1M4 LINE L1 -960 5186 4547 2106 105 0 0 chr2 125185380 125185666 -128070917 - AluSx SINE Alu -6 306 21 423 254 17 18 chr2 125186009 125186145 -128070438 + MIR SINE MIR 4 138 -70 186 43 0 0 chr2 125186226 125186249 -128070334 + (TTA)n Simple_repeat Simple_repeat 2 24 0 237 264 42 0 chr2 125187116 125187188 -128069395 + MIR3 SINE MIR 119 193 -15 324 310 18 9 chr2 125187422 125187535 -128069048 - MIR3 SINE MIR -85 123 10 238 336 39 0 chr2 125187995 125188123 -128068460 - MIR SINE MIR -55 153 21 189 231 0 39 chr2 125188421 125188473 -128068110 + MIR SINE MIR 46 95 -167 192 200 0 0 chr2 125189345 125189385 -128067198 + A-rich Low_complexity Low_complexity 1 40 0 1873 120 46 3 chr2 125190253 125190377 -128066206 + AluSx SINE Alu 1 118 -194 495 0 0 0 chr2 125190377 125190432 -128066151 + (CA)n Simple_repeat Simple_repeat 2 56 0 1873 120 46 3 chr2 125190432 125190591 -128065992 + AluSx SINE Alu 118 296 -16 517 252 14 14 chr2 125190877 125191016 -128065567 - L1MD3 LINE L1 -13 7982 7844 252 0 0 0 chr2 125191229 125191257 -128065326 + (T)n Simple_repeat Simple_repeat 1 28 0 338 330 80 36 chr2 125191493 125191769 -128064814 + L2 LINE L2 2978 3265 -7 315 259 245 0 chr2 125191787 125191926 -128064657 - L3 LINE CR1 -99 1478 1306 247 250 8 48 chr2 125192300 125192424 -128064159 + CT-rich Low_complexity Low_complexity 5 123 0 458 196 24 70 chr2 125192497 125193286 -128063297 + CT-rich Low_complexity Low_complexity 1 753 0 619 245 41 7 chr2 125193417 125193564 -128063019 + MIR SINE MIR 84 235 -27 242 309 10 93 chr2 125193577 125193771 -128062812 + L2 LINE L2 3134 3311 -2 441 290 54 29 chr2 125193881 125194044 -128062539 + MIR SINE MIR 49 208 -54 519 365 8 25 chr2 125194074 125194315 -128062268 - L3 LINE CR1 -867 710 474 226 289 188 8 chr2 125194651 125194779 -128061804 - MIR SINE MIR -110 152 2 217 402 0 0 chr2 125194855 125194952 -128061631 - L3 LINE CR1 -1433 144 48 213 211 0 0 chr2 125195567 125195624 -128060959 + (CA)n Simple_repeat Simple_repeat 2 58 0 289 350 38 50 chr2 125195775 125195935 -128060648 - MIR3 SINE MIR -21 187 30 408 307 54 30 chr2 125196082 125196248 -128060335 - MIR SINE MIR -38 224 55 210 321 112 30 chr2 125196556 125196690 -128059893 + MIR SINE MIR 48 192 -70 305 279 111 49 chr2 125196883 125197109 -128059474 + L2 LINE L2 2948 3187 -85 184 304 63 25 chr2 125197371 125197450 -128059133 - MIR SINE MIR -24 238 157 636 230 42 12 chr2 125197458 125197665 -128058918 - MLT1A2 LTR MaLR -7 379 155 979 168 0 6 chr2 125197675 125197836 -128058747 + FRAM SINE Alu 1 159 -17 648 220 21 0 chr2 125197855 125197996 -128058587 - MLT1A2 LTR MaLR -230 144 1 409 283 71 0 chr2 125198006 125198119 -128058464 - MLT1I LTR MaLR -1 408 288 229 230 81 0 chr2 125198323 125198397 -128058186 - MLT1I LTR MaLR -323 86 7 598 225 8 8 chr2 125198408 125198537 -128058046 - MIR SINE MIR -113 149 21 204 125 0 0 chr2 125199404 125199436 -128057147 + (TGGA)n Simple_repeat Simple_repeat 4 35 0 227 159 68 0 chr2 125199497 125199541 -128057042 + L2 LINE L2 3226 3272 0 198 0 0 0 chr2 125200303 125200325 -128056258 + (CTGGGG)n Simple_repeat Simple_repeat 2 23 0 241 261 91 0 chr2 125200341 125200429 -128056154 + MIR SINE MIR 34 129 -79 669 225 69 6 chr2 125200839 125200999 -128055584 + MIR SINE MIR 69 238 -24 1547 239 63 14 chr2 125201071 125201514 -128055069 + MLT1C LTR MaLR 1 465 -2 466 319 32 16 chr2 125202119 125202307 -128054276 - MIR SINE MIR -56 206 16 234 234 32 53 chr2 125202849 125202943 -128053640 - MLT1E1 LTR MaLR -555 99 8 350 308 108 49 chr2 125205362 125205932 -128050651 - L2 LINE L2 -21 3292 2646 455 252 34 0 chr2 125206115 125206234 -128050349 - MIR SINE MIR -59 203 81 215 289 0 7 chr2 125206987 125207122 -128049461 + (CA)n Simple_repeat Simple_repeat 1 134 0 499 301 145 37 chr2 125207225 125207920 -128048663 - L1MEd LINE L1 -5101 1018 249 4875 171 28 1 chr2 125208052 125209048 -128047535 + L1MB3 LINE L1 5148 6181 -2 261 386 47 0 chr2 125209317 125209444 -128047139 - MIR SINE MIR -118 144 12 365 260 118 0 chr2 125210069 125210196 -128046387 + MIR SINE MIR 104 245 -17 273 186 85 0 chr2 125210390 125210449 -128046134 + L1MC3 LINE L1 7706 7769 -16 256 284 37 0 chr2 125211367 125211448 -128045135 + MIR3 SINE MIR 105 188 -20 253 426 40 5 chr2 125212950 125213173 -128043410 + MIR SINE MIR 20 250 -12 223 299 75 9 chr2 125213623 125213730 -128042853 - MIR SINE MIR -129 133 20 1796 168 50 31 chr2 125213836 125214194 -128042389 + MLT1A1 LTR MaLR 1 365 0 657 299 109 30 chr2 125214824 125215255 -128041328 + L1ME LINE L1 5354 5818 -303 304 272 175 41 chr2 125215387 125215655 -128040928 - MLT1L LTR MaLR -163 452 149 300 250 14 14 chr2 125215746 125215818 -128040765 + L1MC4 LINE L1 7971 8042 0 385 311 31 37 chr2 125216097 125216258 -128040325 - LTR16C LTR ERVL -34 457 298 238 303 29 17 chr2 125217036 125217161 -128039422 + MIR SINE MIR 11 140 -68 361 240 66 41 chr2 125217652 125217773 -128038810 - MIR SINE MIR -133 129 6 329 248 116 0 chr2 125218143 125218264 -128038319 - MIR SINE MIR -39 223 89 218 200 200 0 chr2 125219611 125219686 -128036897 + MIR SINE MIR 27 116 -92 547 356 75 42 chr2 125219687 125220181 -128036402 - MLT1K LTR MaLR 0 588 79 182 360 27 0 chr2 125220212 125220287 -128036296 + MIR3 SINE MIR 83 159 -49 5397 197 21 17 chr2 125220860 125221896 -128034687 - MER45B DNA AcHobo 0 1040 1 182 340 42 21 chr2 125221897 125222041 -128034542 - L2 LINE L2 -261 3011 2865 2209 108 3 0 chr2 125222581 125222886 -128033697 + AluSg SINE Alu 1 306 -4 302 271 77 77 chr2 125224571 125224741 -128031842 + MIR SINE MIR 36 205 -57 183 42 0 0 chr2 125224944 125224968 -128031615 + (GA)n Simple_repeat Simple_repeat 1 24 0 2156 114 13 0 chr2 125225569 125225875 -128030708 + AluSx SINE Alu 3 312 0 1972 144 0 7 chr2 125226651 125226949 -128029634 - AluJo SINE Alu -14 298 3 262 344 16 0 chr2 125227269 125227391 -128029192 - L2 LINE L2 -508 2806 2683 266 222 18 64 chr2 125227539 125227638 -128028945 - MIR3 SINE MIR -47 161 65 492 284 95 6 chr2 125228377 125228546 -128028037 + MIR SINE MIR 23 206 -56 220 311 36 21 chr2 125228661 125228827 -128027756 + MIR SINE MIR 15 180 -63 265 281 42 21 chr2 125229953 125230049 -128026534 - MIR SINE MIR -60 148 51 188 88 59 0 chr2 125230582 125230616 -128025967 + (AAGTG)n Simple_repeat Simple_repeat 5 40 0 307 282 153 0 chr2 125230996 125231127 -128025456 - L2 LINE L2 0 3272 3122 1226 154 90 112 chr2 125231154 125231466 -128025117 + AluJo SINE Alu 1 305 -7 488 314 83 48 chr2 125231936 125232248 -128024335 - L2 LINE L2 -86 3186 2864 314 323 32 32 chr2 125232251 125232375 -128024208 - L2 LINE L2 -194 3078 2955 1574 211 117 21 chr2 125232389 125232825 -128023758 - MLT1F LTR MaLR 0 542 65 528 198 93 31 chr2 125232818 125232980 -128023603 + MER96B DNA MER1_type? 8 179 -238 * 345 209 0 0 chr2 125233040 125233107 -128023476 - MLT1F LTR MaLR -475 67 1 560 238 0 16 chr2 125233299 125233425 -128023158 - MLT1C LTR MaLR 0 467 344 240 179 51 13 chr2 125233452 125233530 -128023053 + (TTA)n Simple_repeat Simple_repeat 3 83 0 1059 225 36 8 chr2 125233531 125233780 -128022803 - MLT1C LTR MaLR -126 341 86 331 230 207 15 chr2 125234375 125234510 -128022073 + MER117 DNA MER1_type 1 161 -36 226 346 77 31 chr2 125234558 125234688 -128021895 - MIR3 SINE MIR -67 141 6 1086 198 24 0 chr2 125234856 125235063 -128021520 + MER20 DNA MER1_type 5 216 -3 523 324 125 25 chr2 125235065 125235689 -128020894 + L2 LINE L2 2578 3268 -45 2160 98 0 26 chr2 125235689 125235994 -128020589 + AluSx SINE Alu 2 298 -14 523 324 125 25 chr2 125235994 125236031 -128020552 + L2 LINE L2 3268 3300 -13 216 0 0 0 chr2 125236031 125236055 -128020528 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 513 193 0 0 chr2 125236517 125236600 -128019983 - AluJ/FLAM SINE Alu -228 84 2 333 244 23 0 chr2 125236603 125236689 -128019894 + L2 LINE L2 2989 3076 -237 351 321 9 9 chr2 125236818 125236924 -128019659 + MLT1L LTR MaLR 510 615 0 2149 152 10 70 chr2 125236940 125237355 -128019228 - MLT1B LTR MaLR 0 390 1 199 260 135 0 chr2 125237648 125237744 -128018839 - MIR SINE MIR -87 175 67 298 330 115 40 chr2 125237827 125238148 -128018435 + LTR16A LTR ERVL 102 446 -4 191 281 24 24 chr2 125238360 125238442 -128018141 - MIR SINE MIR -91 117 36 369 266 62 0 chr2 125239568 125239681 -128016902 + MIR SINE MIR 104 223 -39 254 319 9 18 chr2 125239996 125240109 -128016474 + (CA)n Simple_repeat Simple_repeat 1 112 0 2101 107 0 16 chr2 125240154 125240472 -128016111 + AluSq SINE Alu 1 313 0 274 206 15 0 chr2 125241172 125241240 -128015343 + L1MA10 LINE L1 6260 6328 -6 314 277 84 25 chr2 125241503 125241622 -128014961 - MER5A DNA MER1_type -2 187 62 392 357 21 0 chr2 125244509 125244652 -128011931 - MIR SINE MIR -86 176 31 229 361 0 21 chr2 125244782 125244879 -128011704 - MER5A DNA MER1_type -19 170 76 365 289 208 10 chr2 125245298 125245495 -128011088 - MIR SINE MIR -15 247 12 230 231 154 0 chr2 125246266 125246357 -128010226 + LTR33 LTR ERVL 54 158 -363 402 179 51 17 chr2 125246501 125246618 -128009965 + LTR33 LTR ERVL 401 521 0 214 319 96 7 chr2 125246650 125246785 -128009798 - MIR3 SINE MIR -57 151 5 510 210 0 0 chr2 125248217 125248317 -128008266 + MER3 DNA MER1_type 79 131 -78 230 311 68 10 chr2 125248512 125248615 -128007968 + L2 LINE L2 3158 3266 -6 364 328 37 0 chr2 125249107 125249241 -128007342 + MIR3 SINE MIR 38 176 -32 494 276 53 0 chr2 125249580 125249750 -128006833 + MER63A DNA MER1_type 30 208 -2 208 358 25 0 chr2 125249762 125249843 -128006740 + L2 LINE L2 3187 3269 -3 280 250 260 0 chr2 125250561 125250657 -128005926 - MLT1H1 LTR MaLR -98 457 337 273 129 86 14 chr2 125250721 125250791 -128005792 - MLT1G1 LTR MaLR -338 229 155 365 236 57 8 chr2 125250818 125250941 -128005642 - MLT1G1 LTR MaLR -466 129 1 573 302 74 21 chr2 125251049 125251291 -128005292 - MIR SINE MIR 0 262 8 356 396 75 0 chr2 125251361 125251548 -128005035 + MIR SINE MIR 44 244 -18 194 282 0 0 chr2 125251716 125251755 -128004828 - MIR SINE MIR -3 259 221 928 310 120 14 chr2 125252037 125252546 -128004037 + L2 LINE L2 2751 3292 -21 669 221 22 0 chr2 125252550 125252686 -128003897 + AluJb SINE Alu 171 309 -3 665 214 126 19 chr2 125252975 125253134 -128003449 + MER45A DNA AcHobo 2 177 -1 209 311 100 11 chr2 125253247 125253337 -128003246 - L2 LINE L2 -29 3243 3146 229 246 139 66 chr2 125253855 125254052 -128002531 - MIR SINE MIR -3 259 33 387 332 110 16 chr2 125255182 125255450 -128001133 + L1MC/D LINE L1 5194 5484 -747 264 270 124 0 chr2 125255527 125255616 -128000967 + MIR SINE MIR 46 145 -117 286 277 43 21 chr2 125257136 125257230 -127999353 + MIR SINE MIR 103 198 -64 184 284 95 43 chr2 125257409 125257566 -127999017 + MIR3 SINE MIR 40 208 0 444 213 28 0 chr2 125258787 125258895 -127997688 + MLT1I LTR MaLR 49 159 -250 255 296 57 0 chr2 125258983 125259151 -127997432 + MLT1J2 LTR MaLR 276 407 -2 279 301 105 7 chr2 125259300 125259443 -127997140 - MIR SINE MIR -4 258 102 736 276 80 5 chr2 125259587 125259818 -127996765 - MIR SINE MIR -1 261 13 2345 249 133 18 chr2 125259880 125260873 -127995710 - HAL1 LINE L1 0 2507 1401 361 304 36 8 chr2 125261059 125261309 -127995274 + L1M4 LINE L1 4164 4420 -1726 529 287 94 27 chr2 125261342 125261864 -127994719 + L1M4 LINE L1 4499 5055 -1091 2186 105 0 13 chr2 125262073 125262387 -127994196 + AluSg SINE Alu 1 310 0 1262 92 0 0 chr2 125262387 125262550 -127994033 + AluSc SINE Alu 129 291 -18 1566 142 80 75 chr2 125262550 125262924 -127993659 - MSTB1 LTR MaLR -33 399 24 414 273 37 6 chr2 125262967 125263128 -127993455 + Charlie8 DNA MER1_type 46 211 -2206 441 0 0 0 chr2 125263412 125263461 -127993122 + (TG)n Simple_repeat Simple_repeat 2 50 0 506 295 115 35 chr2 125263545 125263868 -127992715 + L2 LINE L2 2702 3047 -266 24 32 0 0 chr2 125264787 125264818 -127991765 + GC_rich Low_complexity Low_complexity 1 31 0 27 29 0 0 chr2 125265031 125265065 -127991518 + GC_rich Low_complexity Low_complexity 1 34 0 370 248 95 0 chr2 125265293 125265398 -127991185 - MIR SINE MIR -45 217 103 188 358 49 0 chr2 125265573 125265654 -127990929 - L2 LINE L2 -27 3286 3202 297 197 15 0 chr2 125265685 125265751 -127990832 - L2 LINE L2 -252 3061 2995 192 274 16 16 chr2 125265896 125265958 -127990625 - MER5B DNA MER1_type -76 102 41 215 374 84 22 chr2 125266480 125266753 -127989830 + L2 LINE L2 2451 2740 -574 935 120 71 6 chr2 125266753 125266936 -127989647 + L1M3 LINE L1 5278 5472 -711 494 189 110 31 chr2 125266948 125267033 -127989550 - L1ME LINE L1 -366 5798 5698 2420 181 64 5 chr2 125267033 125267469 -127989114 + LTR40b LTR ERVL 1 462 0 494 189 110 31 chr2 125267469 125267510 -127989073 - L1ME LINE L1 -466 5698 5662 353 266 206 37 chr2 125267510 125267724 -127988859 + MLT1J LTR MaLR 226 475 -36 264 208 13 65 chr2 125267868 125267945 -127988638 + L2 LINE L2 3241 3313 0 411 366 24 0 chr2 125268669 125268833 -127987750 + MIR3 SINE MIR 35 202 -6 319 294 105 58 chr2 125269100 125269492 -127987091 + L2 LINE L2 2788 3199 -73 610 273 6 12 chr2 125269499 125269660 -127986923 + MLT1J LTR MaLR 6 165 -346 2281 100 0 3 chr2 125270274 125270585 -127985998 - AluSg SINE Alu 0 310 1 210 286 55 11 chr2 125271698 125271789 -127984794 + MIR SINE MIR 45 139 -69 538 313 7 0 chr2 125271810 125271957 -127984626 + MIR SINE MIR 69 216 -46 388 299 0 19 chr2 125272222 125272376 -127984207 + Charlie8 DNA MER1_type 111 261 -2156 180 0 0 0 chr2 125272426 125272446 -127984137 + (CCCCG)n Simple_repeat Simple_repeat 5 24 0 180 312 64 28 chr2 125275142 125275251 -127981332 + MIR SINE MIR 96 208 -54 392 266 150 12 chr2 125275341 125275514 -127981069 + MLT1J LTR MaLR 113 309 -202 878 288 46 13 chr2 125276398 125276704 -127979879 + MLT1J LTR MaLR 23 338 -173 282 287 43 11 chr2 125277674 125277768 -127978815 - MIR SINE MIR -56 206 110 489 296 111 0 chr2 125277866 125278038 -127978545 + MIR SINE MIR 16 206 -56 217 370 144 10 chr2 125278778 125278986 -127977597 + L2 LINE L2 2120 2355 -959 417 329 41 63 chr2 125279502 125280366 -127976217 - L1ME4a LINE L1 -12 6109 5228 2020 99 3 3 chr2 125280366 125280648 -127975935 - AluSp SINE Alu -1 312 31 1867 164 0 13 chr2 125280658 125280957 -127975626 - AluSx SINE Alu -17 295 1 417 329 41 63 chr2 125280957 125281142 -127975441 - L1ME4a LINE L1 -902 5219 4982 289 328 159 20 chr2 125281237 125281357 -127975226 - L2 LINE L2 0 3313 3211 189 0 0 0 chr2 125281357 125281378 -127975205 + (CAAA)n Simple_repeat Simple_repeat 1 21 0 2223 163 51 22 chr2 125281380 125281561 -127975022 + MSTB LTR MaLR 1 175 -251 2342 76 10 0 chr2 125281561 125281864 -127974719 + AluY SINE Alu 1 306 -5 2223 163 51 22 chr2 125281864 125282094 -127974489 + MSTB LTR MaLR 175 424 -2 289 328 159 20 chr2 125282094 125282315 -127974268 - L2 LINE L2 -102 3211 2921 294 29 0 0 chr2 125282449 125282484 -127974099 + (TG)n Simple_repeat Simple_repeat 1 35 0 185 294 20 0 chr2 125282615 125282666 -127973917 + L2 LINE L2 3215 3266 -6 318 26 0 0 chr2 125283101 125283140 -127973443 + (CA)n Simple_repeat Simple_repeat 1 39 0 326 314 0 0 chr2 125283185 125283271 -127973312 + G-rich Low_complexity Low_complexity 2 87 0 261 270 14 0 chr2 125283871 125283945 -127972638 - MIR SINE MIR -96 112 38 347 311 52 10 chr2 125284760 125284930 -127971653 - MIR SINE MIR -22 240 62 1229 246 120 14 chr2 125286520 125286954 -127969629 - MLT1L LTR MaLR -5 610 131 303 276 131 48 chr2 125287919 125288064 -127968519 - MIR SINE MIR -56 206 50 200 162 54 0 chr2 125289098 125289135 -127967448 + CT-rich Low_complexity Low_complexity 3 41 0 251 278 66 104 chr2 125289808 125290067 -127966516 + L2 LINE L2 2934 3182 -90 266 288 0 0 chr2 125290212 125290278 -127966305 + MIR SINE MIR 70 135 -73 192 77 0 0 chr2 125290952 125290978 -127965605 + (CCCCCA)n Simple_repeat Simple_repeat 3 28 0 360 251 114 18 chr2 125292513 125292680 -127963903 + LTR16A LTR ERVL 29 211 -239 234 164 91 0 chr2 125292689 125292744 -127963839 + LTR16A LTR ERVL 391 450 0 320 306 177 34 chr2 125293793 125293940 -127962643 + MER91A DNA MER1_type 22 189 -7 359 200 47 47 chr2 125293972 125294057 -127962526 - MIR SINE MIR -119 143 59 2947 201 69 66 chr2 125294679 125294748 -127961835 + Zaphod DNA AcHobo 6 73 -3958 303 28 0 0 chr2 125294748 125294784 -127961799 + (CA)n Simple_repeat Simple_repeat 2 37 0 2380 92 3 3 chr2 125294785 125295089 -127961494 - AluSp SINE Alu -9 304 1 2947 201 69 66 chr2 125295089 125295627 -127960956 + Zaphod DNA AcHobo 73 622 -3409 2396 95 7 0 chr2 125295627 125295932 -127960651 + AluSc SINE Alu 1 307 -2 2947 201 69 66 chr2 125295932 125296293 -127960290 + Zaphod DNA AcHobo 622 980 -3051 720 228 52 1 chr2 125296302 125296515 -127960068 - MER58B DNA MER1_type -2 339 110 388 215 77 119 chr2 125296663 125296974 -127959609 + MER97c DNA MER1_type? 767 1064 -26 742 249 111 0 chr2 125296974 125297163 -127959420 - MER63A DNA MER1_type 0 210 1 1132 316 76 21 chr2 125297223 125297852 -127958731 - ERVL LTR ERVL -2275 3489 2826 1608 283 77 30 chr2 125298101 125298734 -127957849 - ERVL LTR ERVL -3212 2552 1890 263 256 103 0 chr2 125299443 125299521 -127957062 - L2 LINE L2 -783 2531 2446 357 351 20 13 chr2 125299632 125299783 -127956800 - MIR SINE MIR -97 165 14 238 337 23 0 chr2 125299916 125300002 -127956581 - MIR SINE MIR -77 185 98 749 159 27 24 chr2 125303022 125303189 -127953394 - MIR SINE MIR -26 236 67 573 226 168 0 chr2 125304310 125304465 -127952118 - MER5A DNA MER1_type 0 189 9 1152 217 70 79 chr2 125304476 125304905 -127951678 - MLT1J LTR MaLR -59 452 28 811 198 37 12 chr2 125305161 125305323 -127951260 + MIR SINE MIR 27 192 -70 690 204 152 34 chr2 125305648 125306093 -127950490 + MLT2F LTR ERVL 36 622 -41 583 88 67 12 chr2 125306093 125306340 -127950243 + (TCTA)n Simple_repeat Simple_repeat 1 260 0 558 314 35 6 chr2 125306402 125306574 -127950009 - MIR3 SINE MIR -12 196 20 219 367 58 0 chr2 125306658 125306797 -127949786 - L2 LINE L2 -24 3248 3102 349 259 83 17 chr2 125307920 125308070 -127948513 + MIR SINE MIR 24 186 -76 192 360 36 45 chr2 125309401 125309512 -127947071 + L2 LINE L2 3162 3271 -1 574 189 35 0 chr2 125309726 125309895 -127946688 + (TGGA)n Simple_repeat Simple_repeat 3 177 0 183 333 89 33 chr2 125310074 125310164 -127946419 + MIR SINE MIR 99 193 -69 449 287 76 17 chr2 125311720 125311908 -127944675 - L1ME3 LINE L1 -202 5960 5754 200 35 35 0 chr2 125311908 125311937 -127944646 + (CATTC)n Simple_repeat Simple_repeat 4 33 0 449 287 76 17 chr2 125311937 125311985 -127944598 - L1ME3 LINE L1 -408 5754 5710 1513 252 100 23 chr2 125312317 125312916 -127943667 - HAL1 LINE L1 -287 2220 1576 1857 190 140 25 chr2 125312923 125313402 -127943181 + MLT1F LTR MaLR 6 539 -3 1363 243 99 85 chr2 125313405 125314241 -127942342 - HAL1 LINE L1 -927 1580 733 1228 220 170 72 chr2 125314251 125314793 -127941790 - MLT1G1 LTR MaLR 0 595 1 1740 206 147 5 chr2 125314827 125315268 -127941315 - MLT1D LTR MaLR -1 504 1 191 288 30 0 chr2 125315624 125315690 -127940893 + MIR3 SINE MIR 88 155 -53 1782 214 45 73 chr2 125316021 125316220 -127940363 + L1M4 LINE L1 4565 4768 -1378 2359 101 0 19 chr2 125316220 125316536 -127940047 + AluSg SINE Alu 1 310 0 1782 214 45 73 chr2 125316536 125316646 -127939937 + L1M4 LINE L1 4768 4880 -1266 1858 163 17 0 chr2 125316646 125316946 -127939637 - AluJo SINE Alu -7 305 1 1782 214 45 73 chr2 125316946 125317241 -127939342 + L1M4 LINE L1 4880 5153 -993 1923 173 13 0 chr2 125317271 125317578 -127939005 - AluJb SINE Alu -1 311 1 2702 255 63 3 chr2 125317632 125318671 -127937912 - L1MEc LINE L1 -2809 3406 2306 1039 158 16 33 chr2 125318675 125318858 -127937725 + AluJo SINE Alu 3 182 -130 411 231 19 0 chr2 125318866 125318970 -127937613 - L1MEc LINE L1 -4668 1728 1623 1683 268 68 8 chr2 125319037 125319623 -127936960 - L1MC4 LINE L1 -139 7903 7283 2242 103 17 0 chr2 125319626 125319917 -127936666 - AluSg SINE Alu -10 300 5 1933 133 7 0 chr2 125319966 125320251 -127936332 - AluSq SINE Alu -9 304 18 1422 210 81 42 chr2 125320465 125320588 -127935995 - MLT1E2 LTR MaLR -175 451 334 1756 178 0 16 chr2 125320588 125320897 -127935686 - AluJo SINE Alu -3 309 6 1422 210 81 42 chr2 125320897 125321207 -127935376 - MLT1E2 LTR MaLR -292 334 1 521 262 111 34 chr2 125321383 125321734 -127934849 - L1ME4a LINE L1 -2 6119 5742 1979 130 0 4 chr2 125321734 125322010 -127934573 - AluJo SINE Alu -37 275 1 262 326 35 7 chr2 125323223 125323367 -127933216 - Charlie8 DNA MER1_type -2183 234 87 821 183 55 12 chr2 125323368 125323532 -127933051 + AluJo SINE Alu 119 289 -23 228 235 0 0 chr2 125323568 125323619 -127932964 - Charlie8 DNA MER1_type -2353 64 14 242 258 41 52 chr2 125323652 125323749 -127932834 - MIR SINE MIR -69 139 44 223 333 86 5 chr2 125323985 125324171 -127932412 - L3 LINE CR1 -377 1200 1000 2188 97 32 0 chr2 125324354 125324671 -127931912 + AluSq SINE Alu 1 326 0 680 284 122 43 chr2 125324851 125325196 -127931387 - L3 LINE CR1 -686 891 520 434 289 19 48 chr2 125326194 125326402 -127930181 - L2 LINE L2 -188 3084 2883 36 23 0 0 chr2 125326444 125326487 -127930096 + AT_rich Low_complexity Low_complexity 1 43 0 320 222 37 25 chr2 125326487 125326568 -127930015 + L1MCa LINE L1 1983 2064 -4362 * 384 227 16 36 chr2 125326538 125326663 -127929920 - L1MC4 LINE L1 -1339 6983 1980 682 241 33 21 chr2 125326729 125326970 -127929613 - L1MC5 LINE L1 -34 7927 7684 1924 144 84 19 chr2 125326984 125327351 -127929232 - MSTB1 LTR MaLR 0 432 42 195 204 0 0 chr2 125327351 125327395 -127929188 + T-rich Low_complexity Low_complexity 2 45 0 289 167 19 0 chr2 125327423 125327477 -127929106 - MSTB1 LTR MaLR -377 55 1 1336 235 144 43 chr2 125327483 125328087 -127928496 - L1MC5 LINE L1 -291 7670 7006 1542 168 78 6 chr2 125328102 125328448 -127928135 - MER3 DNA MER1_type 0 2624 2254 338 264 55 0 chr2 125328457 125328548 -127928035 - MER3 DNA MER1_type -68 141 46 421 160 73 93 chr2 125328596 125328746 -127927837 - L1MC5 LINE L1 -1012 6949 6803 1011 155 54 155 chr2 125328753 125329107 -127927476 - MLT1A2 LTR MaLR 0 374 57 1582 251 120 83 chr2 125329133 125329984 -127926599 - L1MC4a LINE L1 -1016 6792 5974 1767 181 7 7 chr2 125329984 125330272 -127926311 + AluJo SINE Alu 1 288 -24 1582 251 120 83 chr2 125330272 125330689 -127925894 - L1MC4a LINE L1 -1834 5974 5462 2391 117 0 0 chr2 125330689 125330996 -127925587 - AluSq SINE Alu -6 307 1 1582 251 120 83 chr2 125330996 125331180 -127925403 - L1MC4a LINE L1 -2346 5462 5286 1223 301 48 98 chr2 125331208 125332214 -127924369 - L1MC4a LINE L1 -908 5238 4284 2357 83 6 22 chr2 125333160 125333473 -127923110 - AluSq SINE Alu -5 308 1 200 167 0 56 chr2 125333490 125333544 -127923039 + L2 LINE L2 3263 3313 0 1967 152 32 56 chr2 125334371 125334745 -127921838 + MLT1A1 LTR MaLR 1 365 0 990 238 112 83 chr2 125334825 125334922 -127921661 + MLT1G1 LTR MaLR 1 94 -501 2316 94 3 3 chr2 125334922 125335220 -127921363 + AluSx SINE Alu 1 298 -14 990 238 112 83 chr2 125335220 125335677 -127920906 + MLT1G1 LTR MaLR 94 571 -24 325 256 128 92 chr2 125335784 125336089 -127920494 + L2 LINE L2 2959 3274 -39 291 281 52 10 chr2 125336104 125336200 -127920383 - MIR3 SINE MIR -106 102 3 27 0 0 0 chr2 125337139 125337166 -127919417 + AT_rich Low_complexity Low_complexity 1 27 0 2233 94 0 14 chr2 125337166 125337463 -127919120 - AluSx SINE Alu -19 293 1 380 310 97 7 chr2 125337531 125337686 -127918897 + MIR SINE MIR 86 254 -8 249 310 0 47 chr2 125339584 125339713 -127916870 + C-rich Low_complexity Low_complexity 2 124 0 257 292 17 25 chr2 125344134 125344254 -127912329 + CT-rich Low_complexity Low_complexity 4 122 0 207 247 30 12 chr2 125344268 125344447 -127912136 + CT-rich Low_complexity Low_complexity 1 182 0 183 205 0 0 chr2 125345466 125345505 -127911078 + A-rich Low_complexity Low_complexity 1 39 0 806 141 0 0 chr2 125346139 125346260 -127910323 + FLAM_C SINE Alu 23 143 0 257 235 179 34 chr2 125346488 125346605 -127909978 + MIR3 SINE MIR 63 197 -11 342 282 21 49 chr2 125347554 125347696 -127908887 + MER5A DNA MER1_type 8 145 -44 777 287 66 24 chr2 125349567 125349992 -127906591 - L1ME4a LINE L1 -126 5995 5553 227 306 40 16 chr2 125350120 125350244 -127906339 - MIR SINE MIR -62 146 20 994 168 87 0 chr2 125350313 125350509 -127906074 + MER20 DNA MER1_type 7 219 0 220 259 17 17 chr2 125350727 125350785 -127905798 - L2 LINE L2 -2 3270 3213 772 79 8 16 chr2 125351647 125351774 -127904809 + (TCCA)n Simple_repeat Simple_repeat 3 128 0 203 331 115 23 chr2 125352314 125352444 -127904139 + MIR3 SINE MIR 51 192 -16 481 201 142 8 chr2 125353246 125353380 -127903203 + MIR SINE MIR 111 262 0 312 312 13 70 chr2 125354064 125354221 -127902362 - L1ME4a LINE L1 -121 6000 5853 271 267 23 0 chr2 125354599 125354685 -127901898 - L1ME4a LINE L1 -452 5669 5582 2218 97 3 0 chr2 125355059 125355358 -127901225 - AluY SINE Alu -11 300 1 572 262 164 42 chr2 125355505 125355864 -127900719 - L1MC4a LINE L1 -1801 6007 5605 2127 102 3 34 chr2 125355866 125356188 -127900395 - AluSx SINE Alu 0 312 1 432 324 92 24 chr2 125356198 125356405 -127900178 - L1MC4a LINE L1 -2332 5476 5256 2213 68 0 59 chr2 125356409 125356730 -127899853 + AluSx SINE Alu 1 302 -10 776 116 23 0 chr2 125356795 125356924 -127899659 - L1PB4 LINE L1 -4 6152 6021 735 258 48 21 chr2 125356924 125357110 -127899473 - L1ME4a LINE L1 -2193 5615 5425 3712 215 64 30 chr2 125357112 125357642 -127898941 - L1ME1 LINE L1 -43 6192 5681 2183 112 7 0 chr2 125357642 125357945 -127898638 - AluSq SINE Alu -8 305 1 3712 215 64 30 chr2 125357945 125359389 -127897194 - L1ME1 LINE L1 -554 5681 4135 249 219 73 10 chr2 125359436 125359532 -127897051 - L1ME1 LINE L1 -3641 2574 2473 3527 221 122 28 chr2 125359571 125360769 -127895814 - L1ME1 LINE L1 -5047 1349 40 197 330 92 0 chr2 125361611 125361720 -127894863 - MIR3 SINE MIR -34 174 56 4226 171 53 28 chr2 125361917 125362744 -127893839 - MER21B LTR ERV1 -11 852 5 190 343 27 0 chr2 125362959 125363032 -127893551 + MIR3 SINE MIR 109 183 -25 267 366 26 26 chr2 125365057 125365251 -127891332 - MIR SINE MIR -48 214 21 225 263 77 58 chr2 125365711 125365867 -127890716 - L2 LINE L2 -221 3051 2893 260 151 0 19 chr2 125366104 125366157 -127890426 + (TGGA)n Simple_repeat Simple_repeat 1 52 0 327 300 100 20 chr2 125367460 125367610 -127888973 - MER103 DNA DNA -3 163 2 305 265 41 0 chr2 125369449 125369547 -127887036 + MIR SINE MIR 101 202 -60 274 214 80 36 chr2 125370510 125370622 -127885961 + MIR SINE MIR 24 141 -67 244 274 88 18 chr2 125370984 125371097 -127885486 - MIR SINE MIR -34 228 108 339 25 0 0 chr2 125371585 125371625 -127884958 + (TG)n Simple_repeat Simple_repeat 1 40 0 403 313 6 0 chr2 125372448 125372627 -127883956 + (TG)n Simple_repeat Simple_repeat 1 180 0 260 332 92 20 chr2 125373398 125373594 -127882989 + MIR SINE MIR 49 258 -4 422 266 22 29 chr2 125374126 125374265 -127882318 + MIR3 SINE MIR 65 202 -6 201 319 215 0 chr2 125374705 125374840 -127881743 + L2 LINE L2 2605 2768 -546 379 240 107 20 chr2 125374852 125375002 -127881581 + MER117 DNA MER1_type 1 163 -34 493 312 80 11 chr2 125375733 125376009 -127880574 - L1ME4a LINE L1 -245 5876 5582 767 152 0 7 chr2 125376651 125376802 -127879781 + CT-rich Low_complexity Low_complexity 1 150 0 891 143 74 95 chr2 125377060 125377291 -127879292 - L1MB7 LINE L1 0 6184 5959 472 307 78 0 chr2 125377393 125377546 -127879037 + Charlie8 DNA MER1_type 112 276 -2141 335 247 181 20 chr2 125378963 125379116 -127877467 - MIR SINE MIR -55 207 28 301 286 0 48 chr2 125379875 125380064 -127876519 + (TG)n Simple_repeat Simple_repeat 1 180 0 311 309 95 30 chr2 125381862 125382030 -127874553 - MIR SINE MIR 0 262 84 518 250 27 9 chr2 125382390 125382588 -127873995 - MIR SINE MIR 0 262 2 207 167 0 0 chr2 125382675 125382717 -127873866 + (TG)n Simple_repeat Simple_repeat 2 43 0 219 232 0 0 chr2 125383181 125383237 -127873346 + GA-rich Low_complexity Low_complexity 2 57 0 283 303 37 28 chr2 125383397 125383506 -127873077 - MIR SINE MIR -92 170 61 203 298 124 16 chr2 125383802 125383923 -127872660 + MIR SINE MIR 65 198 -64 2257 98 3 0 chr2 125384373 125384670 -127871913 + AluSx SINE Alu 1 298 -14 477 347 58 29 chr2 125384716 125384993 -127871590 - L1ME4a LINE L1 -145 5976 5692 348 357 88 6 chr2 125385147 125385329 -127871254 - MIR SINE MIR -18 244 48 263 235 30 91 chr2 125385356 125385430 -127871153 + L3 LINE CR1 1426 1490 -87 1001 204 68 10 chr2 125385430 125385636 -127870947 - MER20 DNA MER1_type -1 218 1 263 235 30 91 chr2 125385636 125385693 -127870890 + L3 LINE CR1 1490 1549 -28 337 275 72 95 chr2 125387513 125387775 -127868808 + L2 LINE L2 2997 3252 -20 774 192 0 8 chr2 125388258 125388507 -127868076 + (CCCA)n Simple_repeat Simple_repeat 1 246 0 183 42 0 0 chr2 125388606 125388630 -127867953 + (CCCCCA)n Simple_repeat Simple_repeat 1 24 0 272 343 40 3 chr2 125388970 125389105 -127867478 + MIR SINE MIR 2 140 -68 224 257 326 21 chr2 125390011 125390155 -127866428 - MIR3 SINE MIR -15 193 6 2142 100 7 7 chr2 125390291 125390592 -127865991 - AluSc SINE Alu -8 301 1 722 113 0 0 chr2 125390592 125390689 -127865894 - AluSp/q SINE Alu -11 302 206 677 115 0 0 chr2 125390693 125390789 -127865794 - AluS SINE Alu -215 97 2 195 236 56 42 chr2 125391703 125391775 -127864808 + MIR SINE MIR 116 188 -74 215 325 122 32 chr2 125391973 125392096 -127864487 - MIR SINE MIR -114 148 15 249 208 0 0 chr2 125393181 125393229 -127863354 - L2 LINE L2 -28 3285 3238 203 178 256 44 chr2 125393239 125393329 -127863254 + MIR SINE MIR 33 141 -67 1918 73 91 18 chr2 125395301 125395576 -127861007 - AluY SINE Alu -16 295 1 242 297 20 20 chr2 125397882 125397983 -127858600 + MIR3 SINE MIR 83 183 -25 191 122 0 49 chr2 125398628 125398669 -127857914 + (GGGA)n Simple_repeat Simple_repeat 2 40 0 332 85 85 0 chr2 125399875 125399934 -127856649 - L1 LINE L1 -1323 4823 4760 339 264 23 31 chr2 125401227 125401356 -127855227 - MIR3 SINE MIR -24 184 57 265 311 39 10 chr2 125401528 125401631 -127854952 + MIR SINE MIR 39 144 -118 22 0 0 0 chr2 125402606 125402628 -127853955 + AT_rich Low_complexity Low_complexity 1 22 0 668 311 62 12 chr2 125403424 125403665 -127852918 + MIR SINE MIR 7 259 -3 239 270 14 101 chr2 125403790 125403938 -127852645 - L1ME4a LINE L1 -100 6021 5887 1867 207 73 15 chr2 125404003 125404481 -127852102 - Charlie1b DNA MER1_type -7 516 11 344 308 127 51 chr2 125406513 125406828 -127849755 + L1MD2 LINE L1 4595 4933 -1213 2394 64 0 3 chr2 125406879 125407191 -127849392 + AluY SINE Alu 1 311 0 521 256 58 0 chr2 125407640 125407796 -127848787 + MER69A DNA AcHobo 2 166 -11 2312 229 42 29 chr2 125408191 125408785 -127847798 - L1ME3A LINE L1 -17 6153 5552 252 266 147 0 chr2 125409246 125409389 -127847194 + L1ME4a LINE L1 5751 5914 -207 2187 79 21 0 chr2 125409470 125409760 -127846823 + AluY SINE Alu 1 296 -15 335 315 47 8 chr2 125411821 125411948 -127844635 + MIR SINE MIR 102 233 -29 379 274 17 33 chr2 125412199 125412560 -127844023 + G-rich Low_complexity Low_complexity 1 354 0 185 308 29 58 chr2 125412992 125413096 -127843487 + L3 LINE CR1 797 897 -680 1103 235 20 20 chr2 125413798 125414097 -127842486 - L1ME1 LINE L1 -5 6161 5899 1648 163 11 11 chr2 125414211 125414518 -127842065 + AluJo SINE Alu 1 307 0 415 289 47 13 chr2 125414565 125414714 -127841869 - MIR SINE MIR -30 232 79 233 326 163 0 chr2 125416969 125417067 -127839516 - MIR SINE MIR -12 250 137 192 40 0 0 chr2 125417080 125417105 -127839478 + (TG)n Simple_repeat Simple_repeat 2 26 0 270 0 0 0 chr2 125417166 125417196 -127839387 + (TG)n Simple_repeat Simple_repeat 2 31 0 1670 161 3 7 chr2 125417213 125417527 -127839056 - AluJb SINE Alu 0 313 1 4456 198 47 48 chr2 125420367 125421661 -127834922 + L1MD2 LINE L1 5062 6351 -8 183 80 0 0 chr2 125421955 125421980 -127834603 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 347 263 325 5 chr2 125422284 125422478 -127834105 + MIR SINE MIR 2 257 -5 181 281 18 18 chr2 125423004 125423061 -127833522 + L2 LINE L2 3237 3293 -20 801 268 153 17 chr2 125423536 125423890 -127832693 + LTR16C LTR ERVL 83 484 -7 243 204 0 0 chr2 125424586 125424640 -127831943 + A-rich Low_complexity Low_complexity 1 54 0 2225 101 7 0 chr2 125425647 125425954 -127830629 - AluSq SINE Alu -4 309 1 2179 125 0 0 chr2 125426378 125426690 -127829893 + AluSx SINE Alu 1 312 0 217 368 9 19 chr2 125426871 125426977 -127829606 - MIR SINE MIR -50 212 108 527 98 11 0 chr2 125427588 125427680 -127828903 + (CA)n Simple_repeat Simple_repeat 2 94 0 251 239 120 33 chr2 125428639 125428731 -127827852 + MIR3 SINE MIR 65 164 -44 369 0 0 0 chr2 125429119 125429160 -127827423 + (CA)n Simple_repeat Simple_repeat 2 42 0 185 298 0 0 chr2 125429463 125429510 -127827073 - L2 LINE L2 -12 3301 3255 309 198 8 0 chr2 125429708 125429782 -127826801 - MIR SINE MIR -71 137 61 306 73 0 0 chr2 125430340 125430381 -127826202 + (CA)n Simple_repeat Simple_repeat 2 42 0 181 279 39 96 chr2 125430610 125430714 -127825869 + MIR SINE MIR 119 216 -46 423 244 57 0 chr2 125430873 125430996 -127825587 - MER5A DNA MER1_type -59 130 1 377 258 166 26 chr2 125431200 125431351 -127825232 - MER5A DNA MER1_type 0 189 18 726 215 0 61 chr2 125432945 125433108 -127823475 - MER63A DNA MER1_type 0 210 58 238 184 41 0 chr2 125433145 125433194 -127823389 - MER63A DNA MER1_type -159 51 1 1667 128 109 0 chr2 125434036 125434301 -127822282 + AluSx SINE Alu 1 294 -18 324 282 86 6 chr2 125435568 125435731 -127820852 - MER5B DNA MER1_type 0 178 3 207 162 0 0 chr2 125436142 125436179 -127820404 + GA-rich Low_complexity Low_complexity 3 39 0 379 232 0 8 chr2 125436391 125436493 -127820090 - MIR SINE MIR -77 131 33 341 317 59 30 chr2 125438544 125438771 -127817812 + MIR SINE MIR 3 225 -37 2271 52 14 0 chr2 125440514 125440800 -127815783 + AluY SINE Alu 1 290 -21 640 247 21 40 chr2 125442105 125442293 -127814290 + MIR SINE MIR 33 216 -46 201 121 0 0 chr2 125442521 125442554 -127814029 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 1684 176 22 6 chr2 125444144 125444463 -127812120 + MER33 DNA MER1_type 1 324 0 401 307 0 0 chr2 125445675 125445776 -127810807 - MIR SINE MIR -62 200 100 182 258 73 73 chr2 125446993 125447117 -127809466 + MIR3 SINE MIR 84 207 -1 * 259 321 24 0 chr2 125447060 125447144 -127809439 - MIR SINE MIR -10 252 167 497 254 37 8 chr2 125447441 125447575 -127809008 + MIR SINE MIR 40 177 -85 210 37 0 0 chr2 125448036 125448063 -127808520 + (CA)n Simple_repeat Simple_repeat 1 27 0 306 0 0 0 chr2 125448711 125448745 -127807838 + (CA)n Simple_repeat Simple_repeat 1 34 0 508 290 121 31 chr2 125448754 125448978 -127807605 + L2 LINE L2 2920 3163 -109 323 279 0 0 chr2 125449620 125449706 -127806877 - MER94 DNA DNA -48 86 1 3231 233 53 12 chr2 125450579 125451505 -127805078 - L1MC4a LINE L1 -1 7807 6844 424 279 21 58 chr2 125452061 125452289 -127804294 - MIR SINE MIR -25 237 19 513 306 44 17 chr2 125452387 125452567 -127804016 + MER5A DNA MER1_type 1 185 -4 1528 230 64 39 chr2 125452866 125453348 -127803235 - MLT1D LTR MaLR -6 499 6 312 325 81 16 chr2 125453437 125453560 -127803023 - MIR SINE MIR -35 227 97 396 345 68 10 chr2 125454892 125455098 -127801485 + MIR SINE MIR 24 241 -21 206 312 26 0 chr2 125456623 125456700 -127799883 - L3 LINE CR1 -201 1376 1298 215 344 140 25 chr2 125457039 125457353 -127799230 - L2 LINE L2 -2 3270 2921 551 233 191 3 chr2 125457736 125457927 -127798656 - MIR SINE MIR -14 248 12 258 132 0 0 chr2 125460494 125460532 -127796051 - Alu SINE Alu -264 38 1 1120 193 116 110 chr2 125460710 125461193 -127795390 + MLT1D LTR MaLR 20 505 0 913 155 25 25 chr2 125461374 125461535 -127795048 + FRAM SINE Alu 1 161 -5 252 0 0 0 chr2 125462819 125462847 -127793736 + (T)n Simple_repeat Simple_repeat 1 28 0 211 376 41 24 chr2 125463326 125463496 -127793087 - L2 LINE L2 -106 3207 3035 401 181 202 0 chr2 125463749 125463843 -127792740 + MER5A DNA MER1_type 17 129 -60 2054 109 10 0 chr2 125466109 125466411 -127790172 - AluSx SINE Alu -7 305 1 317 311 126 22 chr2 125466444 125466579 -127790004 - MIR SINE MIR -111 151 3 189 0 0 0 chr2 125468979 125469000 -127787583 + (CTGGGG)n Simple_repeat Simple_repeat 3 23 0 375 295 82 0 chr2 125469192 125469339 -127787244 - MIR3 SINE MIR -16 192 34 448 315 166 11 chr2 125469374 125469865 -127786718 + L2 LINE L2 2698 3272 0 180 313 0 0 chr2 125470203 125470251 -127786332 + MIR SINE MIR 107 154 -108 491 202 31 28 chr2 125470735 125471096 -127785487 + (CA)n Simple_repeat Simple_repeat 1 362 0 403 303 29 11 chr2 125471031 125471206 -127785377 + (CATATA)n Simple_repeat Simple_repeat 1 178 0 * 283 129 48 40 chr2 125471209 125471333 -127785250 + (CA)n Simple_repeat Simple_repeat 2 126 0 410 178 22 33 chr2 125471364 125471544 -127785039 + (CA)n Simple_repeat Simple_repeat 2 179 0 341 351 0 0 chr2 125472053 125472184 -127784399 + MIR SINE MIR 47 177 -85 258 32 0 0 chr2 125472209 125472240 -127784343 + (CA)n Simple_repeat Simple_repeat 2 32 0 466 317 75 3 chr2 125472524 125472728 -127783855 - MIR SINE MIR -11 251 33 2156 174 53 16 chr2 125473069 125473456 -127783127 + L1MB3 LINE L1 5737 6143 -40 2626 39 0 3 chr2 125473456 125473767 -127782816 + AluY SINE Alu 1 310 -1 2156 174 53 16 chr2 125473767 125473810 -127782773 + L1MB3 LINE L1 6143 6183 0 734 82 61 0 chr2 125473941 125474039 -127782544 + AluSg SINE Alu 21 124 -186 459 0 0 0 chr2 125476749 125476800 -127779783 + (CCCTG)n Simple_repeat Simple_repeat 1 51 0 274 301 102 30 chr2 125476864 125477030 -127779553 + MER5B DNA MER1_type 1 178 0 309 318 11 0 chr2 125478508 125478596 -127777987 - MIR SINE MIR -109 153 65 496 339 60 0 chr2 125479039 125479222 -127777361 + MIR SINE MIR 46 239 -23 349 309 37 37 chr2 125479319 125479481 -127777102 - MIR SINE MIR -70 192 31 354 231 8 17 chr2 125480144 125480159 -127776424 - L1MA4A LINE L1 -6 6297 6283 670 201 27 0 chr2 125480159 125480308 -127776275 - L1PB4 LINE L1 -2 6154 6002 272 272 22 22 chr2 125480695 125480787 -127775796 - L3b LINE CR1 -117 1466 1375 2313 89 10 0 chr2 125481908 125482212 -127774371 + AluSq SINE Alu 1 307 -6 629 303 52 39 chr2 125482406 125483170 -127773413 - L1ME3A LINE L1 -199 5971 5161 251 336 28 37 chr2 125483380 125483487 -127773096 + L2 LINE L2 3008 3113 -159 1372 229 93 18 chr2 125485077 125485526 -127771057 - MLT1D LTR MaLR -4 501 19 741 165 0 0 chr2 125485699 125485898 -127770685 + (TTCA)n Simple_repeat Simple_repeat 1 199 0 271 281 91 94 chr2 125485898 125486282 -127770301 - L2 LINE L2 0 3272 2890 675 273 63 26 chr2 125486737 125487104 -127769479 - L2 LINE L2 -565 2749 2310 187 340 0 0 chr2 125487614 125487664 -127768919 + L2 LINE L2 3004 3053 -219 194 308 66 11 chr2 125488489 125488580 -127768003 - MIR SINE MIR -43 219 124 234 239 34 102 chr2 125488902 125488990 -127767593 + MIR SINE MIR 174 255 -7 312 319 25 17 chr2 125490783 125490902 -127765681 - L2 LINE L2 -5 3267 3148 391 277 14 7 chr2 125491161 125491309 -127765274 + MER113 DNA MER1_type? 24 172 -349 185 259 49 37 chr2 125492853 125492934 -127763649 - MIR SINE MIR -158 104 23 219 384 72 16 chr2 125493069 125493194 -127763389 + L2 LINE L2 3141 3272 0 410 305 134 12 chr2 125493939 125494103 -127762480 - MIR SINE MIR -12 250 67 339 248 28 0 chr2 125494223 125494332 -127762251 + (TG)n Simple_repeat Simple_repeat 2 113 0 426 253 104 26 chr2 125494469 125494623 -127761960 + MIR SINE MIR 88 253 -9 225 271 90 9 chr2 125494856 125495023 -127761560 - L2 LINE L2 -183 3089 2865 206 340 229 5 chr2 125495074 125495450 -127761133 - L2 LINE L2 -568 2746 2287 305 245 92 31 chr2 125495571 125495669 -127760914 + MIR SINE MIR 10 113 -149 218 342 133 17 chr2 125496940 125497060 -127759523 - MIR3 SINE MIR -4 204 71 277 242 164 8 chr2 125497961 125498089 -127758494 - MIR SINE MIR -8 254 107 259 369 9 9 chr2 125498355 125498466 -127758117 + (CGTG)n Simple_repeat Simple_repeat 4 114 0 970 252 90 16 chr2 125498774 125499095 -127757488 + L1ME3A LINE L1 5794 6138 -32 392 270 128 7 chr2 125499172 125499320 -127757263 - MIR SINE MIR -41 221 56 689 211 76 11 chr2 125500226 125500411 -127756172 - MLT1F1 LTR MaLR 0 567 371 490 224 35 50 chr2 125500445 125500646 -127755937 - MLT1F1 LTR MaLR -267 287 75 249 192 39 0 chr2 125501733 125501785 -127754798 + L2 LINE L2 3255 3308 -5 231 36 0 0 chr2 125502980 125503008 -127753575 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 192 338 49 49 chr2 125503189 125503331 -127753252 + L2 LINE L2 3042 3183 -89 257 109 22 0 chr2 125505476 125505522 -127751061 + (TG)n Simple_repeat Simple_repeat 1 47 0 345 309 68 8 chr2 125506484 125506622 -127749961 + MIR SINE MIR 21 152 -56 210 191 0 0 chr2 125506861 125506903 -127749680 + (CA)n Simple_repeat Simple_repeat 2 43 0 249 257 0 0 chr2 125508174 125508244 -127748339 + LOR1a LTR ERV1 238 307 -190 712 219 126 17 chr2 125508267 125508343 -127748240 + LOR1a LTR ERV1 234 300 -197 2050 102 3 3 chr2 125508343 125508628 -127747955 - AluSx SINE Alu -5 307 23 712 219 126 17 chr2 125508628 125508789 -127747794 + LOR1a LTR ERV1 300 497 0 1088 278 96 8 chr2 125509267 125509641 -127746942 + MLT1I LTR MaLR 3 409 0 1687 196 50 110 chr2 125509984 125510106 -127746477 + MLT1D LTR MaLR 2 130 -375 1770 162 3 31 chr2 125510106 125510427 -127746156 + AluJo SINE Alu 1 312 0 1687 196 50 110 chr2 125510427 125510454 -127746129 + MLT1D LTR MaLR 130 157 -348 946 107 28 11 chr2 125510454 125510631 -127745952 + GA-rich Low_complexity Low_complexity 1 180 0 1687 196 50 110 chr2 125510631 125511015 -127745568 + MLT1D LTR MaLR 157 504 -1 914 220 10 34 chr2 125511465 125511674 -127744909 - MER3 DNA MER1_type -1 208 5 247 274 0 14 chr2 125512348 125512421 -127744162 + LTR33A LTR ERVL 446 517 -6 299 328 25 34 chr2 125513208 125513238 -127743345 - L2 LINE L2 -2 3270 3241 2211 180 37 22 chr2 125513238 125513698 -127742885 + MLT1C LTR MaLR 1 467 0 299 328 25 34 chr2 125513698 125513786 -127742797 - L2 LINE L2 -31 3241 3153 335 320 33 52 chr2 125514009 125514162 -127742421 - MIR3 SINE MIR -49 159 10 379 271 20 53 chr2 125514844 125514995 -127741588 + MIR SINE MIR 3 148 -114 21 0 0 0 chr2 125515246 125515267 -127741316 + AT_rich Low_complexity Low_complexity 1 21 0 2474 157 52 0 chr2 125515393 125515800 -127740783 + MSTA LTR MaLR 1 428 0 2164 114 10 0 chr2 125516354 125516662 -127739921 + AluSx SINE Alu 1 311 -1 597 255 133 38 chr2 125516939 125517202 -127739381 - MLT1I LTR MaLR -4 405 118 1769 243 61 17 chr2 125517513 125518040 -127738543 + L1MB7 LINE L1 5620 6169 -15 207 204 0 0 chr2 125518338 125518392 -127738191 + (TTCA)n Simple_repeat Simple_repeat 1 54 0 403 276 37 22 chr2 125518477 125518611 -127737972 - L2 LINE L2 -3 3310 3175 800 246 96 0 chr2 125519172 125519359 -127737224 + MER3 DNA MER1_type 1 205 -4 2214 99 7 0 chr2 125519409 125519713 -127736870 + AluSg SINE Alu 1 306 -4 180 0 0 0 chr2 125519748 125519768 -127736815 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 238 254 0 45 chr2 125519768 125519824 -127736759 - L2 LINE L2 -11 3302 3248 508 271 0 0 chr2 125521227 125521345 -127735238 - MIR SINE MIR -74 188 71 222 290 14 14 chr2 125521644 125521713 -127734870 + MIR SINE MIR 109 177 -85 323 296 8 56 chr2 125521857 125521982 -127734601 + L2 LINE L2 2669 2787 -527 449 219 46 9 chr2 125522091 125522211 -127734372 - MIR SINE MIR -68 140 18 475 207 0 180 chr2 125522560 125522622 -127733961 - MER5A DNA MER1_type -2 187 116 2040 198 16 0 chr2 125522622 125523005 -127733578 + L1MB5 LINE L1 5777 6165 -9 2267 89 3 13 chr2 125523005 125523309 -127733274 - AluSp SINE Alu -12 301 1 475 207 0 180 chr2 125523309 125523467 -127733116 - MER5A DNA MER1_type -71 118 6 378 350 99 32 chr2 125524253 125524718 -127731865 + L2 LINE L2 2818 3313 0 204 217 0 0 chr2 125524808 125524854 -127731729 + (TG)n Simple_repeat Simple_repeat 1 46 0 314 284 134 62 chr2 125525561 125525882 -127730701 - L2 LINE L2 -2 3270 2927 291 327 59 55 chr2 125526673 125526927 -127729656 + L2 LINE L2 3010 3264 -8 194 287 81 29 chr2 125527632 125527768 -127728815 - L2 LINE L2 -226 3046 2904 240 275 138 0 chr2 125527907 125528016 -127728567 + LTR33 LTR ERVL 101 224 -297 340 259 82 20 chr2 125528080 125528227 -127728356 + LTR33 LTR ERVL 335 490 -31 340 311 30 7 chr2 125528314 125528449 -127728134 + MER117 DNA MER1_type 31 168 -29 308 261 52 20 chr2 125529265 125529418 -127727165 - L1ME4a LINE L1 0 6121 5964 1182 179 40 17 chr2 125531469 125531771 -127724812 - MER33 DNA MER1_type -22 302 1 208 314 194 8 chr2 125532015 125532139 -127724444 + MIR SINE MIR 57 203 -59 1432 151 126 4 chr2 125533223 125533494 -127723089 - AluJo SINE Alu -8 304 1 267 250 25 12 chr2 125533682 125533762 -127722821 + HsTC2 DNA Tc2 4 84 -1814 4012 189 31 97 chr2 125533806 125535112 -127721471 - L1MB7 LINE L1 -16 6168 5011 2212 88 3 3 chr2 125535112 125535406 -127721177 - AluSx SINE Alu -16 296 3 4012 189 31 97 chr2 125535406 125535735 -127720848 - L1MB7 LINE L1 -1173 5011 4662 319 277 9 27 chr2 125535744 125535856 -127720727 - MARNA DNA Mariner -199 387 278 327 203 0 0 chr2 125536003 125536077 -127720506 + CT-rich Low_complexity Low_complexity 2 75 0 451 332 176 15 chr2 125536078 125536470 -127720113 - L2 LINE L2 -1 3312 2858 310 347 78 41 chr2 125536575 125536820 -127719763 + L1ME4a LINE L1 5857 6110 -11 289 244 51 0 chr2 125537340 125537418 -127719165 + MIR SINE MIR 101 182 -80 277 211 35 0 chr2 125537519 125537576 -127719007 - MIR SINE MIR -59 149 91 373 183 19 0 chr2 125538108 125538212 -127718371 + (TG)n Simple_repeat Simple_repeat 2 107 0 249 327 112 0 chr2 125538223 125538330 -127718253 + MIR SINE MIR 30 148 -60 188 391 0 0 chr2 125540357 125540421 -127716162 - L2 LINE L2 -72 3241 3178 234 260 0 0 chr2 125540902 125540952 -127715631 - MIR SINE MIR -65 143 94 320 231 289 0 chr2 125541586 125541690 -127714893 - MIR3 SINE MIR -70 138 5 194 309 106 8 chr2 125541901 125542024 -127714559 - L2 LINE L2 -155 3117 2983 188 352 88 11 chr2 125542041 125542132 -127714451 - L2 LINE L2 -9 3263 3166 719 246 105 58 chr2 125542134 125542496 -127714087 + LTR16A LTR ERVL 42 420 -30 275 302 119 0 chr2 125542593 125542713 -127713870 - MIR SINE MIR -68 140 35 599 185 109 0 chr2 125542799 125542918 -127713665 + FLAM_A SINE Alu 2 133 0 22 0 0 0 chr2 125543085 125543107 -127713476 + GC_rich Low_complexity Low_complexity 1 22 0 357 239 186 12 chr2 125544921 125545088 -127711495 + LTR16A LTR ERVL 225 420 -30 275 302 119 0 chr2 125545185 125545305 -127711278 - MIR SINE MIR -68 140 35 599 185 109 0 chr2 125545391 125545510 -127711073 + FLAM_A SINE Alu 2 133 0 402 21 0 0 chr2 125549421 125549468 -127707115 + (CA)n Simple_repeat Simple_repeat 1 47 0 1882 116 78 0 chr2 125552942 125553210 -127703373 + AluSg SINE Alu 1 289 -21 1669 175 38 7 chr2 125553516 125553808 -127702775 + AluJb SINE Alu 1 301 -11 921 166 51 0 chr2 125553916 125554073 -127702510 + FRAM SINE Alu 1 164 -12 596 196 6 17 chr2 125554106 125554279 -127702304 + CT-rich Low_complexity Low_complexity 2 172 0 207 156 0 0 chr2 125554292 125554324 -127702259 + CT-rich Low_complexity Low_complexity 1 32 0 1133 75 19 0 chr2 125554394 125554554 -127702029 + L1PA13 LINE L1 6001 6163 0 2076 227 74 36 chr2 125554602 125555360 -127701223 + L1ME LINE L1 1791 2577 -3963 377 231 51 8 chr2 125555352 125555469 -127701114 + L1ME LINE L1 5091 5212 -1328 * 810 186 83 36 chr2 125555480 125555506 -127701077 + MER58C DNA MER1_type 14 37 -2383 2448 101 2 99 chr2 125555506 125555921 -127700662 + THE1C LTR MaLR 1 375 0 810 186 83 36 chr2 125555921 125556087 -127700496 + MER58C DNA MER1_type 37 215 0 2064 213 34 14 chr2 125556087 125556706 -127699877 + L1ME LINE L1 5205 5834 -726 244 326 33 0 chr2 125556812 125556904 -127699679 + MIR SINE MIR 111 205 -57 1558 248 152 9 chr2 125557107 125557648 -127698935 + MLT2F LTR ERVL 5 622 -41 730 114 19 13 chr2 125557648 125557806 -127698777 + (TCTA)n Simple_repeat Simple_repeat 3 161 0 384 77 0 0 chr2 125557823 125557875 -127698708 + (TCCA)n Simple_repeat Simple_repeat 3 54 0 531 264 66 57 chr2 125558063 125558455 -127698128 - MLT1H LTR MaLR -20 389 40 505 256 200 26 chr2 125558501 125558696 -127697887 - MIR SINE MIR -26 236 8 403 301 136 24 chr2 125558832 125559263 -127697320 - L2 LINE L2 -213 3059 2575 911 197 49 0 chr2 125559282 125559465 -127697118 + MSTB LTR MaLR 211 402 -24 8564 174 36 14 chr2 125559509 125561120 -127695463 + MSTB-int LTR MaLR 1 1646 -5 2189 146 36 0 chr2 125561125 125561489 -127695094 + MSTB LTR MaLR 1 377 -49 232 349 61 50 chr2 125561521 125562043 -127694540 - L2 LINE L2 -796 2518 1991 472 270 106 82 chr2 125562085 125562792 -127693791 + L2 LINE L2 2448 3162 -151 327 177 0 0 chr2 125563808 125563870 -127692713 + (TG)n Simple_repeat Simple_repeat 2 63 0 242 297 94 29 chr2 125564175 125564313 -127692270 + L2 LINE L2 3123 3269 -3 2139 98 198 6 chr2 125564512 125564871 -127691712 - MSTA LTR MaLR 0 428 1 863 255 168 9 chr2 125564960 125565305 -127691278 + L2 LINE L2 2061 2460 -854 1942 186 80 40 chr2 125565317 125565768 -127690815 + MLT2B1 LTR ERVL 12 480 -40 808 120 13 76 chr2 125565768 125565926 -127690657 - Tigger7 DNA MER2_type -1 2586 2439 * 1681 236 3 3 chr2 125565921 125566265 -127690318 - Tigger7 DNA MER2_type -2143 344 1 385 352 188 8 chr2 125566308 125566680 -127689903 + L2 LINE L2 2459 2897 -417 2387 209 107 5 chr2 125566684 125567319 -127689264 - L1MC4a LINE L1 0 7808 7109 1784 226 40 6 chr2 125567332 125567828 -127688755 + L1MB5 LINE L1 817 1329 -5213 3592 207 84 62 chr2 125568241 125569240 -127687343 + L1MB5 LINE L1 1274 2249 -4395 2180 122 3 0 chr2 125569240 125569534 -127687049 + AluSp SINE Alu 1 295 -18 3592 207 84 62 chr2 125569534 125569620 -127686963 + L1MB5 LINE L1 2249 2332 -4312 1584 172 0 39 chr2 125569620 125569899 -127686684 + AluJo SINE Alu 43 310 -2 3592 207 84 62 chr2 125569899 125571272 -127685311 + L1MB5 LINE L1 2332 3788 -2856 4221 176 36 75 chr2 125571286 125571957 -127684626 + L1MB5 LINE L1 5121 5817 -855 1938 163 10 0 chr2 125571957 125572263 -127684320 - AluJb SINE Alu 0 312 4 4221 176 36 75 chr2 125572263 125573159 -127683424 + L1MB5 LINE L1 5817 6671 -1 231 299 93 19 chr2 125573160 125573267 -127683316 + MER5B DNA MER1_type 56 170 -8 521 276 105 10 chr2 125573557 125573750 -127682833 - MIR SINE MIR -36 172 2 222 265 0 0 chr2 125573845 125573894 -127682689 - MIR SINE MIR -82 126 78 1800 176 21 0 chr2 125573986 125574275 -127682308 + AluJo SINE Alu 1 295 -17 305 186 39 31 chr2 125574333 125574462 -127682121 + (TTATA)n Simple_repeat Simple_repeat 4 133 0 1971 234 132 21 chr2 125574666 125575345 -127681238 - MER97c DNA MER1_type? -191 862 86 2221 69 3 96 chr2 125575345 125575678 -127680905 - AluSx SINE Alu -10 302 1 1971 234 132 21 chr2 125575678 125575765 -127680818 - MER97c DNA MER1_type? -967 86 10 236 235 53 131 chr2 125576858 125577038 -127679545 - MIR3 SINE MIR -41 167 2 184 320 80 0 chr2 125577406 125577456 -127679127 - L2 LINE L2 -58 3214 3161 767 270 87 36 chr2 125577510 125577899 -127678684 + L1MC4 LINE L1 7602 8010 -32 1842 131 0 93 chr2 125577899 125578243 -127678340 - AluJb SINE Alu 0 312 1 1203 245 75 77 chr2 125579274 125579500 -127677083 + L1MC4 LINE L1 6818 7043 -999 1256 172 14 0 chr2 125579500 125579715 -127676868 + MER20 DNA MER1_type 1 218 -1 1203 245 75 77 chr2 125579715 125579842 -127676741 + L1MC4 LINE L1 7043 7169 -873 2124 125 0 16 chr2 125579842 125580155 -127676428 + AluSq SINE Alu 5 312 -1 1203 245 75 77 chr2 125580155 125580465 -127676118 + L1MC4 LINE L1 7169 7481 -561 1005 248 30 14 chr2 125580535 125580830 -127675753 + AluJo SINE Alu 2 301 -1 1178 174 24 0 chr2 125580970 125581183 -127675400 + MER20 DNA MER1_type 1 218 -1 2148 82 0 0 chr2 125581310 125581566 -127675017 + AluSq SINE Alu 5 260 -53 1358 259 82 54 chr2 125581610 125582007 -127674576 + L1MC4 LINE L1 7141 7570 -472 1971 156 3 10 chr2 125582007 125582321 -127674262 + AluJb SINE Alu 1 312 0 1358 259 82 54 chr2 125582321 125582664 -127673919 + L1MC4 LINE L1 7570 7902 -140 448 226 0 15 chr2 125582670 125582807 -127673776 + (TG)n Simple_repeat Simple_repeat 2 136 0 1936 188 72 28 chr2 125582812 125583269 -127673314 + MLT1D LTR MaLR 28 504 -1 276 30 0 0 chr2 125583270 125583282 -127673301 + (TG)n Simple_repeat Simple_repeat 1 45 0 276 30 0 0 chr2 125583282 125583315 -127673268 + (TG)n Simple_repeat Simple_repeat 2 34 0 258 262 64 0 chr2 125583359 125583500 -127673083 + (TATATG)n Simple_repeat Simple_repeat 5 154 0 302 313 94 0 chr2 125583565 125583725 -127672858 + (TATATG)n Simple_repeat Simple_repeat 5 179 0 207 0 0 0 chr2 125583748 125583771 -127672812 + (TG)n Simple_repeat Simple_repeat 2 24 0 2818 218 23 32 chr2 125583836 125584488 -127672095 - MER82 DNA MER2_type -1 652 7 364 244 52 0 chr2 125584490 125584625 -127671958 + L1MC4 LINE L1 7904 7995 0 2776 26 0 0 chr2 125585011 125585317 -127671266 - AluY SINE Alu -5 306 1 431 320 55 11 chr2 125585442 125585623 -127670960 + L2 LINE L2 2288 2476 -838 192 77 0 0 chr2 125585636 125585662 -127670921 + (TGG)n Simple_repeat Simple_repeat 3 28 0 348 310 28 14 chr2 125585696 125585841 -127670742 - L1ME3 LINE L1 -13 6149 6003 1352 250 15 73 chr2 125585845 125585991 -127670592 - L1M4 LINE L1 -2295 3851 3698 1691 211 94 40 chr2 125585991 125586470 -127670113 + MLT1D LTR MaLR 1 505 0 1352 250 15 73 chr2 125586470 125586924 -127669659 - L1M4 LINE L1 -2448 3698 3286 560 259 107 42 chr2 125586933 125587196 -127669387 - L1M4 LINE L1 -3193 2953 2674 570 286 7 26 chr2 125587196 125587350 -127669233 + MIR SINE MIR 41 191 -71 425 314 19 6 chr2 125587778 125587937 -127668646 + L1M4 LINE L1 3441 3601 -2545 387 200 8 80 chr2 125588134 125588259 -127668324 - HAL1b LINE L1 -890 458 343 1340 161 0 52 chr2 125588293 125588542 -127668041 - MER46A DNA MER2_type 0 236 1 488 239 108 50 chr2 125588655 125588877 -127667706 - L2 LINE L2 -1 3312 3078 289 277 29 66 chr2 125591836 125591973 -127664610 + L3 LINE CR1 1432 1563 -14 434 286 72 21 chr2 125592129 125592283 -127664300 - MIR SINE MIR -62 146 35 1326 186 35 56 chr2 125593022 125593360 -127663223 - MLT1A1 LTR MaLR -34 331 1 256 123 246 0 chr2 125593360 125593417 -127663166 - MLT1C LTR MaLR -385 82 12 289 214 0 0 chr2 125593770 125593826 -127662757 + LTR16A1 LTR ERVL 377 432 -25 21 0 0 0 chr2 125593876 125593897 -127662686 + AT_rich Low_complexity Low_complexity 1 21 0 672 149 37 31 chr2 125593897 125594058 -127662525 + MER53 DNA DNA 18 179 -10 * 776 139 21 0 chr2 125593915 125594059 -127662524 - MER53 DNA DNA -24 165 19 2472 225 86 5 chr2 125594338 125594718 -127661865 + MER82 DNA MER2_type 1 447 -206 387 0 0 0 chr2 125594718 125594761 -127661822 + (CA)n Simple_repeat Simple_repeat 2 44 0 2472 225 86 5 chr2 125594761 125594970 -127661613 + MER82 DNA MER2_type 447 638 -15 1812 166 3 3 chr2 125595910 125596206 -127660377 - AluJo SINE Alu -16 296 1 338 263 46 7 chr2 125596221 125596373 -127660210 - HAL1 LINE L1 -125 2382 2225 618 281 106 43 chr2 125596420 125596912 -127659671 + L2 LINE L2 2763 3271 -1 239 302 142 36 chr2 125597268 125597493 -127659090 - LTR16A1 LTR ERVL 0 457 209 1901 134 7 3 chr2 125598872 125599155 -127657428 - AluSx SINE Alu -26 286 3 767 71 10 0 chr2 125599449 125599547 -127657036 - HY3 scRNA scRNA -2 99 1 2345 95 0 0 chr2 125599589 125599893 -127656690 + AluSx SINE Alu 1 304 -8 1778 251 107 0 chr2 125599897 125600384 -127656199 + L1MC4 LINE L1 7310 7848 -194 507 222 16 0 chr2 125600400 125600526 -127656057 + L1MC4 LINE L1 7914 8041 -1 378 284 232 14 chr2 125600544 125600755 -127655828 + L2 LINE L2 3015 3271 -1 272 279 48 75 chr2 125602099 125602171 -127654412 + MER91B DNA MER1_type 20 88 -102 1733 168 53 85 chr2 125602171 125602570 -127654013 + MLT1B LTR MaLR 5 390 0 272 279 48 75 chr2 125602570 125602644 -127653939 + MER91B DNA MER1_type 88 162 -28 225 195 0 0 chr2 125602795 125602836 -127653747 - MER91B DNA MER1_type -150 46 6 647 278 106 51 chr2 125605417 125605984 -127650599 - L2 LINE L2 0 3313 2726 910 164 42 0 chr2 125606056 125606221 -127650362 - MER20 DNA MER1_type -47 172 1 285 329 32 32 chr2 125606228 125606383 -127650200 - L2 LINE L2 -655 2659 2505 559 255 33 32 chr2 125606539 125606753 -127649830 - MLT2D LTR ERVL -123 291 77 2220 126 16 65 chr2 125606774 125607145 -127649438 - L1M3 LINE L1 -498 5682 5334 2097 109 0 0 chr2 125607145 125607453 -127649130 - AluSx SINE Alu 0 308 1 2220 126 16 65 chr2 125607453 125607523 -127649060 - L1M3 LINE L1 -846 5334 5262 627 167 0 0 chr2 125607634 125607772 -127648811 + (CA)n Simple_repeat Simple_repeat 2 139 0 783 291 119 48 chr2 125607772 125608319 -127648264 - MLT2F LTR ERVL -58 605 20 419 266 0 104 chr2 125610352 125610525 -127646058 - MIR SINE MIR -27 235 81 473 232 16 32 chr2 125612422 125612547 -127644036 - MIR SINE MIR -15 247 125 275 269 130 0 chr2 125613121 125613229 -127643354 + L1MC4 LINE L1 7921 8042 0 378 303 114 11 chr2 125613259 125613434 -127643149 - MLT1K LTR MaLR -61 527 335 4372 129 20 35 chr2 125613768 125613921 -127642662 + L1MC1 LINE L1 5186 5340 -993 590 256 0 24 chr2 125613921 125614046 -127642537 + FLAM_A SINE Alu 1 122 -11 4372 129 20 35 chr2 125614046 125614753 -127641830 + L1MC1 LINE L1 5340 6035 -298 1998 146 96 24 chr2 125614753 125615171 -127641412 + LTR45B LTR ERV1 2 449 -40 1594 151 43 11 chr2 125615182 125615193 -127641390 + L1MC1 LINE L1 6039 6048 -285 2174 78 34 3 chr2 125615193 125615489 -127641094 - AluY SINE Alu -6 305 1 1594 151 43 11 chr2 125615489 125615756 -127640827 + L1MC1 LINE L1 6048 6326 -7 2150 95 10 0 chr2 125615756 125616050 -127640533 + AluSp SINE Alu 1 297 -16 344 244 13 13 chr2 125616051 125616129 -127640454 + L1MC4 LINE L1 6626 6703 -1339 * 345 378 28 6 chr2 125616113 125616293 -127640290 + L1M4 LINE L1 3458 3641 -2505 356 282 50 35 chr2 125616391 125616710 -127639873 + L1M4 LINE L1 4430 4753 -1393 1105 191 10 0 chr2 125616718 125616917 -127639666 + AluJb SINE Alu 1 201 -111 203 266 71 97 chr2 125617353 125617507 -127639076 + MIR3 SINE MIR 5 154 -54 315 250 14 0 chr2 125617560 125617632 -127638951 - MIR SINE MIR -71 191 119 2243 92 0 0 chr2 125618296 125618589 -127637994 + AluSx SINE Alu 1 293 -19 1254 154 85 31 chr2 125618765 125619025 -127637558 + AluJo SINE Alu 17 290 -22 201 74 0 0 chr2 125619099 125619126 -127637457 + (GAAAA)n Simple_repeat Simple_repeat 1 27 0 776 319 78 23 chr2 125619732 125620167 -127636416 + L2 LINE L2 2855 3313 0 311 299 47 0 chr2 125620453 125620560 -127636023 + MIR SINE MIR 36 147 -61 208 191 0 64 chr2 125621070 125621148 -127635435 + L2 LINE L2 2913 2983 -289 918 148 0 0 chr2 125621291 125621553 -127635030 + (CA)n Simple_repeat Simple_repeat 1 262 0 258 306 112 53 chr2 125621829 125622205 -127634378 + L2 LINE L2 2868 3265 -7 25 0 0 0 chr2 125622686 125622711 -127633872 + GC_rich Low_complexity Low_complexity 1 25 0 579 282 104 44 chr2 125623464 125623850 -127632733 - L2 LINE L2 -917 2397 1989 243 271 65 19 chr2 125623910 125624017 -127632566 - L2 LINE L2 -1890 1424 1313 216 299 77 34 chr2 125624380 125624497 -127632086 + MIR3 SINE MIR 76 197 -11 336 319 31 49 chr2 125625137 125625300 -127631283 + L3 LINE CR1 586 745 -832 255 344 49 8 chr2 125625404 125625526 -127631057 + MIR SINE MIR 24 150 -58 265 375 42 0 chr2 125626399 125626495 -127630088 + L2 LINE L2 3212 3311 -2 224 277 15 0 chr2 125626617 125626682 -127629901 - MIR SINE MIR -80 182 117 833 250 161 4 chr2 125626735 125627015 -127629568 + MER33 DNA MER1_type 1 324 0 522 275 26 58 chr2 125628194 125628272 -127628311 - MIR SINE MIR -1 261 182 2172 122 0 0 chr2 125628272 125628584 -127627999 + AluSx SINE Alu 1 312 0 522 275 26 58 chr2 125628584 125628694 -127627889 - MIR SINE MIR -80 182 79 839 135 0 0 chr2 125629074 125629200 -127627383 + FLAM_C SINE Alu 1 126 -17 263 305 35 14 chr2 125629554 125629695 -127626888 - L2 LINE L2 -214 3058 2915 683 257 65 46 chr2 125629816 125630077 -127626506 + L2 LINE L2 3047 3312 -1 183 252 112 9 chr2 125630438 125630545 -127626038 - MIR SINE MIR -72 136 19 300 342 53 20 chr2 125630781 125630933 -127625650 + MIR SINE MIR 105 261 -1 337 249 22 50 chr2 125631193 125631374 -127625209 + (CAGAGA)n Simple_repeat Simple_repeat 3 178 0 1193 184 14 9 chr2 125633042 125633259 -127623324 + AluJb SINE Alu 1 218 -94 247 128 0 0 chr2 125633259 125633298 -127623285 + THE1C-int LTR MaLR 1542 1580 0 2384 120 27 14 chr2 125633300 125633668 -127622915 + THE1C LTR MaLR 3 375 0 2471 202 92 20 chr2 125633863 125634572 -127622011 - L1MDa LINE L1 -4779 1761 1002 1663 238 93 4 chr2 125634571 125635042 -127621541 - L1MDa LINE L1 -5979 561 49 * 381 310 28 14 chr2 125635721 125635863 -127620720 + MIR SINE MIR 40 183 -79 1921 118 0 4 chr2 125636054 125636325 -127620258 - AluSx SINE Alu -42 270 1 297 216 114 11 chr2 125636338 125636426 -127620157 - MIR SINE MIR -138 124 28 1637 111 0 0 chr2 125636597 125636823 -127619760 + AluSg/x SINE Alu 85 310 -2 1273 181 40 53 chr2 125637380 125637683 -127618900 + AluJo SINE Alu 1 299 -13 2516 55 0 3 chr2 125638038 125638346 -127618237 - AluY SINE Alu -4 307 1 415 252 0 58 chr2 125638389 125638528 -127618055 - MIR3 SINE MIR -75 133 3 321 271 31 31 chr2 125639298 125639394 -127617189 - MIR SINE MIR -111 151 56 264 209 245 43 chr2 125640627 125640790 -127615793 + ORSL DNA AcHobo 9 204 -71 2038 128 0 0 chr2 125640791 125641095 -127615488 + AluSg SINE Alu 1 304 -6 2231 205 157 30 chr2 125642607 125642778 -127613805 - MER50 LTR ERV1 0 734 586 2031 122 3 7 chr2 125642778 125643081 -127613502 + AluSq SINE Alu 1 302 -11 2231 205 157 30 chr2 125643081 125643552 -127613031 - MER50 LTR ERV1 -148 586 10 1847 139 0 24 chr2 125643885 125644205 -127612378 + AluJb SINE Alu 1 313 0 1265 176 34 22 chr2 125644486 125644753 -127611830 + AluJo SINE Alu 13 282 -30 302 203 68 0 chr2 125644769 125644828 -127611755 + HAL1b LINE L1 624 686 -662 1609 129 61 27 chr2 125644840 125645134 -127611449 + AluJb SINE Alu 9 312 0 1079 283 74 69 chr2 125645176 125645639 -127610944 + MER77 LTR ERV1 22 480 -166 2264 97 0 7 chr2 125645639 125645937 -127610646 + AluSg SINE Alu 2 297 -13 1079 283 74 69 chr2 125645937 125646095 -127610488 + MER77 LTR ERV1 480 636 -10 1603 264 66 94 chr2 125646189 125647287 -127609296 + L1MC4 LINE L1 299 1365 -5051 1185 233 0 12 chr2 125647536 125647794 -127608789 + AluSg SINE Alu 1 255 -55 1552 316 46 19 chr2 125647903 125648605 -127607978 - L1MC4 LINE L1 -295 7747 7027 811 240 115 7 chr2 125648625 125648904 -127607679 - L1MC4 LINE L1 -1274 6768 6460 2387 43 6 71 chr2 125649098 125649423 -127607160 - AluY SINE Alu -7 304 1 2428 79 0 10 chr2 125649688 125649991 -127606592 - AluSc SINE Alu -9 300 1 361 286 42 8 chr2 125650432 125650551 -127606032 - MER58B DNA MER1_type -13 328 206 378 260 87 38 chr2 125650850 125651087 -127605496 - L1MC5 LINE L1 -202 7759 6588 434 234 30 84 chr2 125650917 125651064 -127605519 + L1MC4 LINE L1 1958 6985 -1337 373 259 42 65 chr2 125651052 125651513 -127605070 + L1MC4 LINE L1 1991 6928 -155 * 386 225 36 40 chr2 125651408 125651521 -127605062 - L1MC4 LINE L1 -1337 6985 6873 2207 112 7 0 chr2 125651521 125651808 -127604775 - AluSx SINE Alu -23 289 1 386 225 36 40 chr2 125651808 125651840 -127604743 - L1MC4 LINE L1 -1449 6873 1963 306 211 21 21 chr2 125651845 125651940 -127604643 - L1MC5 LINE L1 -50 7911 7817 1983 112 76 22 chr2 125652186 125652542 -127604041 + THE1C LTR MaLR 1 375 0 1323 147 0 5 chr2 125652661 125652851 -127603732 + AluSg SINE Alu 1 189 -121 216 316 0 0 chr2 125653602 125653659 -127602924 - L3 LINE CR1 -5 1572 1516 231 65 65 0 chr2 125655083 125655129 -127601454 + GA-rich Low_complexity Low_complexity 1 49 0 317 309 105 0 chr2 125655273 125655425 -127601158 + MIR SINE MIR 81 248 -14 330 325 63 8 chr2 125656301 125656427 -127600156 - MIR SINE MIR -124 138 6 351 274 45 9 chr2 125657045 125657196 -127599387 - MIR SINE MIR -62 146 40 2124 169 85 38 chr2 125657280 125657396 -127599187 - MLT1D LTR MaLR -2 503 394 3289 147 5 30 chr2 125657396 125657904 -127598679 - MER41D LTR ERV1 0 557 63 2225 127 0 3 chr2 125657904 125658211 -127598372 - AluSx SINE Alu -6 306 1 3289 147 5 30 chr2 125658211 125658273 -127598310 - MER41D LTR ERV1 -494 63 1 2124 169 85 38 chr2 125658273 125658636 -127597947 - MLT1D LTR MaLR -111 394 1 519 214 15 15 chr2 125660593 125660724 -127595859 + AluJb SINE Alu 182 312 0 2153 114 7 0 chr2 125660849 125661130 -127595453 - AluSg SINE Alu -27 283 1 621 250 39 22 chr2 125661130 125661301 -127595282 - L2 LINE L2 -8 3305 3129 * 1050 287 36 13 chr2 125661268 125661658 -127594925 - L2 LINE L2 -692 2622 2224 2428 116 15 114 chr2 125661658 125662133 -127594450 - MSTA LTR MaLR 0 428 1 767 266 68 0 chr2 125662134 125662386 -127594197 - L2 LINE L2 -1087 2227 1959 382 230 101 78 chr2 125662778 125662930 -127593653 + ORSL DNA AcHobo 7 167 -108 2084 116 6 28 chr2 125662930 125663249 -127593334 - AluSx SINE Alu 0 312 1 382 230 101 78 chr2 125663249 125663313 -127593270 + ORSL DNA AcHobo 167 228 -47 676 165 0 0 chr2 125663443 125663552 -127593031 + FLAM_C SINE Alu 2 110 -33 525 344 89 18 chr2 125663636 125664197 -127592386 + L1MC4a LINE L1 5307 5907 -1901 2269 126 0 7 chr2 125664317 125664627 -127591956 - AluSx SINE Alu -4 308 1 1337 219 75 55 chr2 125665615 125665957 -127590626 + MLT1C LTR MaLR 6 361 -106 2135 143 31 14 chr2 125665957 125666315 -127590268 - THE1B LTR MaLR 0 364 1 1337 219 75 55 chr2 125666315 125666423 -127590160 + MLT1C LTR MaLR 361 465 -2 438 212 20 10 chr2 125666529 125666628 -127589955 + MER67A LTR ERV1 1 100 -443 352 167 15 0 chr2 125667558 125667624 -127588959 + MIR SINE MIR 82 148 -114 187 220 34 17 chr2 125667830 125667889 -127588694 - MIR SINE MIR -119 89 30 265 284 48 67 chr2 125667926 125668134 -127588449 + L1MC5 LINE L1 7710 7913 -48 267 54 0 0 chr2 125668227 125668264 -127588319 + (TG)n Simple_repeat Simple_repeat 2 38 0 238 194 87 29 chr2 125668300 125668403 -127588180 + L1ME4a LINE L1 5995 6103 -18 1908 162 0 25 chr2 125668403 125668718 -127587865 - AluJo SINE Alu 0 312 6 1799 151 7 0 chr2 125668757 125669035 -127587548 - AluJb SINE Alu -32 280 1 207 332 22 66 chr2 125669847 125670073 -127586510 + L2 LINE L2 2970 3185 -87 289 262 16 0 chr2 125670146 125670207 -127586376 - MER91A DNA MER1_type -134 62 1 249 33 0 0 chr2 125670254 125670284 -127586299 + (TGAA)n Simple_repeat Simple_repeat 2 31 0 282 321 75 0 chr2 125670714 125670820 -127585763 - L2 LINE L2 -8 3264 3151 1657 145 9 110 chr2 125671007 125671455 -127585128 + AluJb SINE Alu 1 413 0 454 214 0 0 chr2 125671352 125671635 -127584948 + GA-rich Low_complexity Low_complexity 1 283 0 2403 74 10 0 chr2 125671716 125672015 -127584568 + AluY SINE Alu 1 302 -9 278 323 79 16 chr2 125672019 125672146 -127584437 + MIR SINE MIR 26 160 -102 625 264 20 12 chr2 125672348 125672573 -127584010 + L1MA10 LINE L1 5955 6334 0 195 277 134 25 chr2 125672741 125672860 -127583723 - L2 LINE L2 0 3313 3182 195 331 86 29 chr2 125673508 125673683 -127582900 + L2 LINE L2 2572 2756 -558 250 271 12 35 chr2 125674106 125674191 -127582392 + L2 LINE L2 3231 3313 0 269 304 96 9 chr2 125675071 125675186 -127581397 + MIR SINE MIR 56 180 -82 389 223 62 36 chr2 125676112 125676224 -127580359 - MER3 DNA MER1_type -94 115 1 603 206 0 0 chr2 125676812 125676967 -127579616 + (TG)n Simple_repeat Simple_repeat 2 156 0 1768 164 39 0 chr2 125677108 125677230 -127579353 + AluJb SINE Alu 1 117 -195 295 20 20 41 chr2 125677230 125677279 -127579304 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 1768 164 39 0 chr2 125677279 125677436 -127579147 + AluJb SINE Alu 117 291 -21 229 284 255 0 chr2 125677505 125677607 -127578976 + MIR SINE MIR 135 262 0 382 260 0 0 chr2 125679495 125679591 -127576992 + MIR SINE MIR 50 145 -117 368 217 11 0 chr2 125679796 125679888 -127576695 + MER96 DNA MER1_type? 1 93 -82 192 313 50 10 chr2 125680048 125680147 -127576436 + L2 LINE L2 3150 3252 -20 263 219 104 52 chr2 125680246 125680342 -127576241 - L2 LINE L2 -31 3241 3141 222 167 25 31 chr2 125680342 125680504 -127576079 + (TG)n Simple_repeat Simple_repeat 1 161 0 591 134 46 6 chr2 125680532 125680836 -127575747 + (TG)n Simple_repeat Simple_repeat 1 316 0 680 110 35 18 chr2 125680853 125681082 -127575501 + (TG)n Simple_repeat Simple_repeat 1 233 0 479 250 32 39 chr2 125681539 125681695 -127574888 - MIR SINE MIR 0 262 108 291 374 37 0 chr2 125681750 125681857 -127574726 + MIR SINE MIR 76 186 -76 515 254 22 0 chr2 125681966 125682100 -127574483 - MIR SINE MIR -77 185 49 1088 216 39 30 chr2 125682138 125682362 -127574221 + MLT1A1 LTR MaLR 1 164 -201 2415 153 10 82 chr2 125682362 125682885 -127573698 - MER66B LTR ERV1 0 486 2 1088 216 39 30 chr2 125682885 125683089 -127573494 + MLT1A1 LTR MaLR 164 365 0 398 275 74 38 chr2 125683104 125683295 -127573288 + MIR SINE MIR 2 198 -62 303 259 75 55 chr2 125683317 125683518 -127573065 - MLT1J LTR MaLR -3 508 304 278 265 24 0 chr2 125684118 125684201 -127572382 - MIR SINE MIR -131 131 47 227 221 0 65 chr2 125684246 125684323 -127572260 - MIR3 SINE MIR -44 164 93 571 309 23 73 chr2 125684486 125684871 -127571712 + L2 LINE L2 2942 3307 -6 254 315 0 0 chr2 125685047 125685136 -127571447 - L1MC4 LINE L1 -1340 6702 6614 351 60 0 0 chr2 125685144 125685194 -127571389 + (GA)n Simple_repeat Simple_repeat 2 51 0 830 182 97 0 chr2 125685325 125685490 -127571093 + MER20 DNA MER1_type 36 216 -3 293 317 20 0 chr2 125685568 125685669 -127570914 - L2 LINE L2 -13 3259 3157 659 276 197 18 chr2 125685901 125686343 -127570240 + MLT1H LTR MaLR 13 533 -16 204 279 98 49 chr2 125686499 125686621 -127569962 - MIR SINE MIR -56 206 79 1707 246 44 48 chr2 125686719 125687263 -127569320 - MLT1H LTR MaLR -1 548 7 371 303 44 34 chr2 125687455 125687642 -127568941 + MIR SINE MIR 1 188 -54 233 287 58 11 chr2 125687799 125687886 -127568697 - MIR SINE MIR -170 92 2 2596 205 73 18 chr2 125687963 125688631 -127567952 + L1ME1 LINE L1 5460 6164 -2 2539 204 24 8 chr2 125689778 125690394 -127566189 - L1M4 LINE L1 -852 5294 4669 24 0 0 0 chr2 125690406 125690430 -127566153 + AT_rich Low_complexity Low_complexity 1 24 0 2705 224 46 49 chr2 125690705 125690843 -127565740 + L1MD2 LINE L1 4548 4685 -1557 1643 181 52 0 chr2 125690843 125691136 -127565447 - AluJb SINE Alu 0 307 1 2705 224 46 49 chr2 125691136 125691757 -127564826 + L1MD2 LINE L1 4685 5319 -923 2250 123 3 0 chr2 125691757 125692067 -127564516 + AluY SINE Alu 1 311 0 2705 224 46 49 chr2 125692067 125692606 -127563977 + L1MD2 LINE L1 5319 5858 -384 2053 145 16 52 chr2 125692606 125692743 -127563840 + MLT2D LTR ERVL 1 141 -273 2083 121 6 19 chr2 125692743 125693057 -127563526 + AluSq SINE Alu 1 310 -3 2053 145 16 52 chr2 125693057 125693305 -127563278 + MLT2D LTR ERVL 141 372 -42 269 262 0 0 chr2 125693309 125693370 -127563213 + (CATA)n Simple_repeat Simple_repeat 2 62 0 225 143 0 24 chr2 125693371 125693413 -127563170 + MLT2D LTR ERVL 367 407 -7 711 227 31 0 chr2 125693417 125693580 -127563003 + L1MD2 LINE L1 5855 6022 -337 1049 231 64 0 chr2 125693591 125693873 -127562710 + L1MD2 LINE L1 6056 6355 -4 228 319 45 51 chr2 125694936 125695185 -127561398 - MIR SINE MIR -14 248 4 199 298 71 0 chr2 125695291 125695375 -127561208 + L2 LINE L2 2990 3079 -193 215 200 0 18 chr2 125695594 125695649 -127560934 + (CATATA)n Simple_repeat Simple_repeat 5 58 0 1809 167 6 13 chr2 125695819 125696131 -127560452 + AluJb SINE Alu 1 310 -2 288 77 0 0 chr2 125696152 125696191 -127560392 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 227 200 127 0 chr2 125746323 125746378 -127510205 - MLT1L LTR MaLR -516 99 38 220 109 18 18 chr2 125747058 125747113 -127509470 + (TTTTG)n Simple_repeat Simple_repeat 1 55 0 251 299 67 8 chr2 125747375 125747509 -127509074 - L1ME3A LINE L1 -221 5949 5808 2255 70 35 3 chr2 125747559 125747845 -127508738 - AluY SINE Alu -16 295 1 2001 148 8 77 chr2 125747934 125748172 -127508411 - MER47A DNA MER2_type -1957 366 162 1867 113 56 0 chr2 125748172 125748438 -127508145 - AluSx SINE Alu -31 281 1 2001 148 8 77 chr2 125748438 125748577 -127508006 - MER47A DNA MER2_type -2161 162 15 721 277 82 20 chr2 125748598 125748988 -127507595 - L1ME3A LINE L1 -520 5644 5210 267 31 0 0 chr2 125749124 125749156 -127507427 + (TTCC)n Simple_repeat Simple_repeat 4 35 0 459 0 0 0 chr2 125749158 125749209 -127507374 + (TTTCC)n Simple_repeat Simple_repeat 4 54 0 307 226 0 0 chr2 125749309 125749371 -127507212 - L1MB8 LINE L1 -84 6094 6033 985 285 97 50 chr2 125749559 125749581 -127507002 + ERVL LTR ERVL 3247 3267 -2497 2225 115 7 3 chr2 125749581 125749885 -127506698 - AluSg SINE Alu -5 305 1 985 285 97 50 chr2 125749885 125750268 -127506315 + ERVL LTR ERVL 3267 3631 -2133 1696 141 47 34 chr2 125750268 125750566 -127506017 + AluJb SINE Alu 1 302 -10 2247 114 0 13 chr2 125750568 125750874 -127505709 + AluSx SINE Alu 2 303 -9 985 285 97 50 chr2 125750874 125751482 -127505101 + ERVL LTR ERVL 3631 4413 -1351 1110 62 0 0 chr2 125751489 125751619 -127504964 + AluSq/x SINE Alu 1 130 -182 271 216 45 11 chr2 125751692 125751780 -127504803 + MLT1E1 LTR MaLR 6 96 -558 * 1444 175 14 169 chr2 125751768 125751880 -127504703 + MLT1E1 LTR MaLR 221 349 -305 1558 201 45 17 chr2 125751880 125752233 -127504350 + MLT1A1 LTR MaLR 1 363 -2 1444 175 14 169 chr2 125752233 125752466 -127504117 + MLT1E1 LTR MaLR 349 466 -188 2296 107 10 0 chr2 125752466 125752774 -127503809 - AluSq SINE Alu -2 311 1 1444 175 14 169 chr2 125752774 125752930 -127503653 + MLT1E1 LTR MaLR 466 645 -9 505 163 0 0 chr2 125753004 125753084 -127503499 + AluJ/FLAM SINE Alu 1 80 -232 341 113 0 0 chr2 125753184 125753237 -127503346 + Alu SINE Alu 242 294 -8 1899 106 74 80 chr2 125753684 125753914 -127502669 - THE1C LTR MaLR 0 375 146 2198 85 3 41 chr2 125753914 125754232 -127502351 + AluSp SINE Alu 5 310 -3 1899 106 74 80 chr2 125754232 125754378 -127502205 - THE1C LTR MaLR -229 146 1 1226 182 17 17 chr2 125754389 125754592 -127501991 - MLT1B LTR MaLR 0 390 188 1031 191 58 35 chr2 125754592 125754791 -127501792 - MSTD LTR MaLR 0 396 203 1840 166 20 10 chr2 125754791 125755093 -127501490 - AluJo SINE Alu -7 305 1 1031 191 58 35 chr2 125755093 125755167 -127501416 - MSTD LTR MaLR -193 203 132 1839 188 0 3 chr2 125755167 125755471 -127501112 + AluSx SINE Alu 1 303 -9 2173 100 3 13 chr2 125755472 125755809 -127500774 + AluSc SINE Alu 2 309 0 1031 191 58 35 chr2 125755809 125755834 -127500749 - MSTD LTR MaLR -263 133 49 3968 91 13 0 chr2 125755974 125756523 -127500060 - L1PA11 LINE L1 -2 6172 5617 334 182 0 0 chr2 125756627 125756682 -127499901 - FLAM_A SINE Alu -74 59 5 215 310 0 0 chr2 125757230 125757301 -127499282 + T-rich Low_complexity Low_complexity 1 71 0 2134 123 0 3 chr2 125760246 125760539 -127496044 - AluSx SINE Alu -20 292 1 2416 92 7 0 chr2 125760552 125760858 -127495725 - AluSx SINE Alu -4 308 1 2832 25 0 3 chr2 125760926 125761243 -127495340 + AluYb8 SINE Alu 1 316 -2 28 0 0 0 chr2 125761283 125761311 -127495272 + AT_rich Low_complexity Low_complexity 1 28 0 887 259 116 48 chr2 125761470 125761913 -127494670 - L1ME4a LINE L1 -219 5902 5410 663 206 0 8 chr2 125761913 125762044 -127494539 - FLAM_A SINE Alu -3 130 1 887 259 116 48 chr2 125762044 125762167 -127494416 - L1ME4a LINE L1 -711 5410 5297 1801 150 0 11 chr2 125762597 125762884 -127493699 - AluJb SINE Alu 0 312 29 2209 69 10 0 chr2 125762903 125763193 -127493390 + L1PA7 LINE L1 5861 6153 -1 2314 110 0 0 chr2 125763394 125763694 -127492889 + AluSx SINE Alu 3 302 -10 310 267 23 12 chr2 125764026 125764112 -127492471 + MLT1J LTR MaLR 223 309 -202 2338 92 7 0 chr2 125764114 125764417 -127492166 - AluSp SINE Alu -8 305 1 1152 194 76 98 chr2 125764439 125764835 -127491748 + MLT1B LTR MaLR 4 390 0 1430 182 69 3 chr2 125764905 125765196 -127491387 + L1M4 LINE L1 2512 2821 -3325 976 142 0 0 chr2 125765196 125765337 -127491246 + AluJo SINE Alu 1 141 -171 26 0 0 0 chr2 125765354 125765380 -127491203 + AT_rich Low_complexity Low_complexity 1 26 0 490 208 52 46 chr2 125765380 125765553 -127491030 + L1M4 LINE L1 2800 2973 -3173 1698 182 3 17 chr2 125765556 125765847 -127490736 + AluJo SINE Alu 1 287 -25 230 315 18 27 chr2 125765877 125765988 -127490595 + L1M4 LINE L1 -723 4294966682 -6920 610 217 0 0 chr2 125766392 125766498 -127490085 + FAM SINE Alu 10 115 -70 4231 233 40 32 chr2 125766507 125767913 -127488670 + L1M4 LINE L1 778 2212 -4170 1827 71 4 55 chr2 125768014 125768268 -127488315 - AluY SINE Alu -70 241 1 1662 160 42 10 chr2 125768414 125768702 -127487881 - AluJo SINE Alu -15 297 1 1649 156 45 7 chr2 125768728 125769063 -127487520 - Tigger4(Zombi) DNA MER2_type -6 2725 1 191 281 0 35 chr2 125769063 125769120 -127487463 + L2 LINE L2 3203 3257 -15 2069 89 0 4 chr2 125769250 125769521 -127487062 - AluSx SINE Alu -4 308 39 527 271 48 6 chr2 125770498 125770664 -127485919 + MIR SINE MIR 90 262 0 189 343 111 19 chr2 125771549 125771657 -127484926 + MIR SINE MIR 33 150 -112 2389 109 0 0 chr2 125772149 125772461 -127484122 - AluSx SINE Alu 0 312 1 832 205 0 7 chr2 125772496 125772647 -127483936 - AluJo SINE Alu -16 286 137 357 255 154 63 chr2 125772649 125773050 -127483533 - L1MC4a LINE L1 -293 5828 5465 262 186 186 0 chr2 125773057 125773127 -127483456 + L2 LINE L2 3195 3277 -36 2087 121 14 0 chr2 125773449 125773738 -127482845 - AluSx SINE Alu -19 293 1 607 200 15 15 chr2 125773759 125773889 -127482694 - AluJo SINE Alu -181 131 2 641 171 27 34 chr2 125773902 125774048 -127482535 - AluJb SINE Alu -9 303 159 1713 220 71 9 chr2 125774161 125774844 -127481739 + L1M4 LINE L1 2201 2938 -3444 1727 166 7 30 chr2 125774846 125775148 -127481435 + AluJb SINE Alu 1 295 -17 400 212 9 9 chr2 125775150 125775263 -127481320 + GA-rich Low_complexity Low_complexity 3 115 0 895 118 0 32 chr2 125775279 125775465 -127481118 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1185 205 0 0 chr2 125775465 125775714 -127480869 + L1M4 LINE L1 2941 3189 -3193 279 0 0 0 chr2 125775962 125775993 -127480590 + (TG)n Simple_repeat Simple_repeat 1 31 0 8392 232 64 21 chr2 125776350 125776735 -127479848 + L1M4c LINE L1 1257 1624 -4916 2158 131 3 0 chr2 125776735 125777033 -127479550 + AluSx SINE Alu 1 299 -13 8392 232 64 21 chr2 125777033 125778307 -127478276 + L1M4c LINE L1 1624 2843 -3697 2350 116 0 0 chr2 125778307 125778609 -127477974 + AluSx SINE Alu 1 302 -10 8392 232 64 21 chr2 125778609 125779691 -127476892 + L1M4c LINE L1 2843 3878 -2662 2271 92 3 0 chr2 125779691 125779974 -127476609 + AluSp SINE Alu 1 284 -29 8392 232 64 21 chr2 125779974 125780146 -127476437 + L1M4c LINE L1 3878 5577 -963 1990 129 31 3 chr2 125780153 125780440 -127476143 + AluSq SINE Alu 1 295 -18 234 0 0 0 chr2 125780469 125780495 -127476088 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 723 125 10 0 chr2 125780615 125780719 -127475864 - AluSq/x SINE Alu -207 105 1 1325 172 10 0 chr2 125780722 125780931 -127475652 - AluJb SINE Alu -19 293 83 260 294 68 37 chr2 125780931 125781094 -127475489 + L1MDa LINE L1 2116 2283 -4257 372 203 0 152 chr2 125781109 125781198 -127475385 - L1M4 LINE L1 -3318 2828 2766 2035 114 7 30 chr2 125781198 125781497 -127475086 + AluSx SINE Alu 1 292 -20 372 203 0 152 chr2 125781497 125781545 -127475038 - L1M4 LINE L1 -3380 2766 2712 449 231 210 52 chr2 125781561 125781668 -127474915 + L1M4 LINE L1 4296 4385 -1997 1558 174 72 0 chr2 125781668 125781944 -127474639 + AluJb SINE Alu 1 296 -16 449 231 210 52 chr2 125781944 125782065 -127474518 + L1M4 LINE L1 4385 4560 -1822 404 237 113 0 chr2 125782135 125782232 -127474351 - FRAM SINE Alu -5 161 54 637 167 10 0 chr2 125782353 125782449 -127474134 - AluJ/FLAM SINE Alu -214 98 2 2415 90 3 0 chr2 125782635 125782935 -127473648 - AluSx SINE Alu -11 301 1 292 205 13 64 chr2 125783472 125783550 -127473033 - Tigger2a DNA MER2_type 0 444 371 337 172 0 16 chr2 125784149 125784213 -127472370 - AluS SINE Alu -245 63 1 * 691 174 6 96 chr2 125784213 125784307 -127472276 - Tigger2a DNA MER2_type -2329 379 304 2645 34 0 3 chr2 125784307 125784604 -127471979 + AluY SINE Alu 1 296 -15 691 174 6 96 chr2 125784604 125784651 -127471932 - Tigger2a DNA MER2_type -2404 304 254 389 148 55 0 chr2 125784651 125784779 -127471804 + (TA)n Simple_repeat Simple_repeat 2 136 0 1380 153 81 8 chr2 125784781 125785029 -127471554 - Tigger2a DNA MER2_type -165 269 4 434 276 17 0 chr2 125785043 125785159 -127471424 + L2 LINE L2 2421 2538 -776 1885 179 7 0 chr2 125785162 125785470 -127471113 + AluJb SINE Alu 1 310 -2 1098 311 113 40 chr2 125785544 125785941 -127470642 + HERVL LTR ERVL 1537 1904 -3750 1288 180 92 32 chr2 125785941 125786225 -127470358 - AluJo SINE Alu -11 301 1 1098 311 113 40 chr2 125786225 125786757 -127469826 + HERVL LTR ERVL 1904 2534 -3120 1659 139 0 4 chr2 125786781 125787019 -127469564 - AluJb SINE Alu -12 300 64 21 0 0 0 chr2 125787306 125787327 -127469256 + AT_rich Low_complexity Low_complexity 1 21 0 264 288 88 8 chr2 125787425 125787550 -127469033 + L1MC/D LINE L1 5744 5878 -1930 1028 119 13 19 chr2 125787813 125787972 -127468611 + AluJb SINE Alu 122 279 -33 189 0 0 0 chr2 125787975 125787996 -127468587 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 22 35 0 0 chr2 125788020 125788049 -127468534 + AT_rich Low_complexity Low_complexity 1 29 0 547 197 0 33 chr2 125788207 125788329 -127468254 - AluJo SINE Alu -3 309 192 567 178 195 0 chr2 125788331 125788449 -127468134 - AluJo SINE Alu -169 143 3 2305 95 0 7 chr2 125788554 125788850 -127467733 + AluSx SINE Alu 1 294 -18 625 230 8 0 chr2 125789000 125789126 -127467457 + FLAM_A SINE Alu 1 127 -6 1906 138 3 21 chr2 125789132 125789479 -127467104 + AluSx SINE Alu 1 342 0 1834 153 0 0 chr2 125790210 125790484 -127466099 + AluJb SINE Alu 27 300 -12 2276 114 0 0 chr2 125790566 125790863 -127465720 + AluSx SINE Alu 1 297 -15 3094 170 60 6 chr2 125790863 125791509 -127465074 - L1MB8 LINE L1 -10 6168 5488 433 307 54 63 chr2 125792615 125792931 -127463652 - L1MC/D LINE L1 -2196 5612 5300 322 219 14 0 chr2 125792954 125793027 -127463556 - MER116 DNA Mariner 0 80 7 2224 96 4 4 chr2 125793111 125793392 -127463191 + AluSp SINE Alu 1 281 -32 207 0 0 0 chr2 125793395 125793418 -127463165 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1055 235 86 3 chr2 125793548 125793850 -127462733 - L1MD3 LINE L1 -23 7972 7646 2245 85 3 0 chr2 125793851 125794162 -127462421 - AluSg SINE Alu 0 312 1 21 57 0 0 chr2 125794162 125794197 -127462386 + AT_rich Low_complexity Low_complexity 1 35 0 707 174 9 0 chr2 125794197 125794312 -127462271 - FLAM_C SINE Alu -26 117 2 2688 226 45 18 chr2 125794322 125795033 -127461550 - L1MC4a LINE L1 -347 7461 6732 184 289 205 0 chr2 125795931 125796014 -127460569 - MIR SINE MIR -65 197 98 417 178 36 0 chr2 125796096 125796203 -127460380 + MIR SINE MIR 31 145 -63 239 179 18 18 chr2 125796841 125796897 -127459686 - L1MC4 LINE L1 -62 7980 7925 205 309 0 0 chr2 125796897 125796981 -127459602 + (TA)n Simple_repeat Simple_repeat 1 84 0 1438 225 63 55 chr2 125797003 125797066 -127459517 - L1MC4 LINE L1 -120 7922 7861 1588 119 27 119 chr2 125797066 125797394 -127459189 - AluYb8 SINE Alu -17 301 4 1438 225 63 55 chr2 125797394 125797841 -127458742 - L1MC4 LINE L1 -181 7861 7408 442 246 103 60 chr2 125797911 125798281 -127458302 - L1MC4 LINE L1 -2054 5754 5369 558 280 86 5 chr2 125798559 125798745 -127457838 + MER58B DNA MER1_type 141 341 0 652 82 0 0 chr2 125799472 125799557 -127457026 - AluSq SINE Alu -95 218 134 2295 106 6 0 chr2 125799557 125799868 -127456715 - AluSq SINE Alu 0 313 1 1461 151 0 21 chr2 125800483 125800767 -127455816 - L1P LINE L1 -797 5349 5072 1495 187 0 62 chr2 125800932 125801237 -127455346 - AluJb SINE Alu -26 286 1 287 308 19 0 chr2 125801240 125801347 -127455236 - LTR67 LTR ERVL -41 516 408 305 296 58 63 chr2 125802229 125802435 -127454148 - L1ME3A LINE L1 -1 6169 5965 2481 78 3 0 chr2 125802540 125802847 -127453736 + AluSq SINE Alu 1 308 -5 912 148 0 7 chr2 125803326 125803468 -127453115 - FLAM_C SINE Alu -2 141 1 2201 128 0 3 chr2 125803471 125803776 -127452807 - AluSx SINE Alu -8 304 1 525 253 93 37 chr2 125803799 125803961 -127452622 - MIR SINE MIR -82 180 10 336 102 0 0 chr2 125804047 125804096 -127452487 + (TCCA)n Simple_repeat Simple_repeat 2 50 0 272 321 128 35 chr2 125804097 125804440 -127452143 - L2 LINE L2 -28 3285 2911 811 137 0 5 chr2 125804629 125804811 -127451772 + AluJb SINE Alu 21 297 -15 2336 90 0 7 chr2 125804815 125805153 -127451430 + AluY SINE Alu 1 311 0 234 253 0 67 chr2 125805798 125805873 -127450710 - MIR3 SINE MIR -54 154 85 767 246 31 69 chr2 125806094 125806326 -127450257 + MIR SINE MIR 3 221 -41 1332 189 118 7 chr2 125806326 125806596 -127449987 - AluJb SINE Alu -2 300 1 767 246 31 69 chr2 125806596 125806637 -127449946 + MIR SINE MIR 221 262 0 360 283 97 0 chr2 125807384 125807529 -127449054 + MER5A DNA MER1_type 13 171 -18 266 237 186 10 chr2 125808218 125808315 -127448268 - MIR SINE MIR -118 144 31 1545 142 40 144 chr2 125808449 125808901 -127447682 + L1MB3 LINE L1 5772 6176 -7 23 33 0 0 chr2 125809315 125809345 -127447238 + AT_rich Low_complexity Low_complexity 1 30 0 1854 145 8 0 chr2 125809345 125809607 -127446976 - AluSx SINE Alu -25 287 24 415 33 33 0 chr2 125811095 125811156 -127445427 + (CA)n Simple_repeat Simple_repeat 1 63 0 21 0 0 0 chr2 125811753 125811774 -127444809 + AT_rich Low_complexity Low_complexity 1 21 0 228 290 21 21 chr2 125813055 125813148 -127443435 - L2 LINE L2 -4 3268 3176 323 184 0 5 chr2 125813369 125813438 -127443145 - AluSp SINE Alu -116 187 137 1106 202 62 99 chr2 125813438 125814111 -127442472 + L1MB3 LINE L1 2148 2934 -3212 1899 158 14 0 chr2 125814111 125814403 -127442180 - AluJb SINE Alu -16 296 1 1106 202 62 99 chr2 125814403 125814647 -127441936 + L1MB3 LINE L1 2934 3185 -2961 1388 176 47 16 chr2 125814648 125814904 -127441679 + AluJo SINE Alu 1 264 -48 511 151 189 0 chr2 125814919 125815025 -127441558 - AluJo SINE Alu -176 136 11 307 242 0 0 chr2 125815038 125815104 -127441479 + L1MB3 LINE L1 4847 4912 -1234 2397 165 95 21 chr2 125815141 125815780 -127440803 + L1MB3 LINE L1 5389 6146 -36 2138 119 21 0 chr2 125815780 125816065 -127440518 + AluSx SINE Alu 1 291 -21 2397 165 95 21 chr2 125816065 125816105 -127440478 + L1MB3 LINE L1 6146 6182 0 240 306 69 0 chr2 125816132 125816204 -127440379 - MIR SINE MIR -163 99 23 954 76 25 0 chr2 125816464 125816582 -127440001 - AluSq/x SINE Alu -192 121 1 1963 113 45 7 chr2 125816830 125817121 -127439462 + AluSx SINE Alu 1 302 -10 688 178 137 46 chr2 125817741 125817938 -127438645 + MER20 DNA MER1_type 5 219 0 180 0 0 0 chr2 125818326 125818346 -127438237 + (TTG)n Simple_repeat Simple_repeat 2 21 0 295 327 55 0 chr2 125820086 125820196 -127436387 + L2 LINE L2 3156 3271 -1 2377 67 0 0 chr2 125820912 125821225 -127435358 + AluY SINE Alu 1 313 0 521 235 44 49 chr2 125821225 125821408 -127435175 + MER5A DNA MER1_type 4 185 -4 182 240 157 66 chr2 125821881 125822002 -127434581 + MIR SINE MIR 119 250 -12 237 301 65 0 chr2 125822742 125822835 -127433748 + L1ME4a LINE L1 5967 6065 -56 257 128 0 0 chr2 125822862 125822901 -127433682 + MADE1 DNA Mariner 1 39 -41 207 381 9 0 chr2 125823879 125823984 -127432599 - L2 LINE L2 -3 3269 3164 1241 136 6 0 chr2 125824608 125824785 -127431798 - AluSg/x SINE Alu -12 298 121 320 258 97 11 chr2 125825350 125825443 -127431140 - MIR SINE MIR -70 192 92 184 273 222 0 chr2 125826157 125826256 -127430327 + L2 LINE L2 3146 3266 -6 26 50 0 0 chr2 125826741 125826781 -127429802 + AT_rich Low_complexity Low_complexity 1 40 0 25 0 0 0 chr2 125827247 125827272 -127429311 + AT_rich Low_complexity Low_complexity 1 25 0 280 332 100 40 chr2 125829121 125829371 -127427212 + L2 LINE L2 2992 3256 -16 209 301 151 14 chr2 125830074 125830147 -127426436 + L2 LINE L2 3229 3311 -2 278 286 32 71 chr2 125830930 125831084 -127425499 - L3 LINE CR1 -42 1535 1388 21 36 0 0 chr2 125831553 125831581 -127425002 + AT_rich Low_complexity Low_complexity 1 28 0 364 305 109 91 chr2 125831762 125832211 -127424372 - L1MC4a LINE L1 -1980 5828 5372 2178 120 7 7 chr2 125832433 125832734 -127423849 - AluSp SINE Alu -12 301 1 260 216 108 27 chr2 125833179 125833290 -127423293 + L1ME4a LINE L1 5941 6060 -61 180 0 0 0 chr2 125833311 125833331 -127423252 + (TG)n Simple_repeat Simple_repeat 2 21 0 1812 145 0 35 chr2 125833350 125833639 -127422944 - AluJo SINE Alu -23 289 11 199 298 87 31 chr2 125833791 125833952 -127422631 + L2 LINE L2 1482 1651 -1663 370 321 193 20 chr2 125834289 125834787 -127421796 + L2 LINE L2 1918 2501 -813 392 318 89 28 chr2 125834789 125835003 -127421580 + L2 LINE L2 2656 2882 -432 2227 135 124 16 chr2 125835148 125835534 -127421049 + MSTA LTR MaLR 1 428 0 10155 121 19 34 chr2 125835536 125837138 -127419445 + MSTA-int LTR MaLR 3 1580 0 1903 152 160 16 chr2 125837138 125837473 -127419110 + MSTA LTR MaLR 1 397 -31 2484 90 0 0 chr2 125837473 125837773 -127418810 - AluSc SINE Alu -9 300 1 1903 152 160 16 chr2 125837773 125837811 -127418772 + MSTA LTR MaLR 397 428 0 187 313 15 30 chr2 125837900 125837967 -127418616 + L2 LINE L2 3136 3201 -71 4678 152 19 17 chr2 125838115 125838724 -127417859 + L1MA5 LINE L1 5464 6077 -223 3636 134 8 15 chr2 125838724 125839255 -127417328 + MER1A DNA MER1_type 1 527 0 4678 152 19 17 chr2 125839255 125839480 -127417103 + L1MA5 LINE L1 6077 6300 0 21 0 0 0 chr2 125841077 125841098 -127415485 + AT_rich Low_complexity Low_complexity 1 21 0 1415 113 28 20 chr2 125845001 125845249 -127411334 - AluSq SINE Alu -63 250 1 514 264 57 25 chr2 125845249 125845408 -127411175 + L2 LINE L2 3145 3308 -5 409 235 135 56 chr2 125845438 125845808 -127410775 - L2 LINE L2 -252 3061 2624 973 289 56 14 chr2 125846104 125846461 -127410122 + LTR16A LTR ERVL 41 412 -38 435 243 19 75 chr2 125846840 125847013 -127409570 + MLT1H LTR MaLR 46 206 -343 2142 103 14 7 chr2 125847013 125847303 -127409280 - AluSq SINE Alu -5 308 17 435 243 19 75 chr2 125847303 125847343 -127409240 + MLT1H LTR MaLR 206 247 -302 405 265 30 8 chr2 125847450 125847582 -127409001 + MLT1G1 LTR MaLR 456 590 -5 537 242 170 25 chr2 125848492 125848769 -127407814 - LTR16A LTR ERVL -75 375 59 216 324 99 27 chr2 125848826 125848937 -127407646 + MIR SINE MIR 109 227 -35 434 200 19 29 chr2 125849032 125849137 -127407446 - MLT1J LTR MaLR 0 511 408 672 212 117 46 chr2 125849151 125849352 -127407231 + MER33 DNA MER1_type 14 199 -2386 2323 91 0 10 chr2 125849352 125849661 -127406922 - AluSx SINE Alu -5 307 2 362 112 3 18 chr2 125849608 125849677 -127406906 - Alu SINE Alu -249 53 2 * 672 212 117 46 chr2 125849677 125849718 -127406865 + MER33 DNA MER1_type 215 251 -2334 2310 110 7 13 chr2 125849718 125850028 -127406555 - AluSq SINE Alu -5 308 1 672 212 117 46 chr2 125850028 125850051 -127406532 + MER33 DNA MER1_type 251 316 -8 885 174 158 5 chr2 125850068 125850258 -127406325 + MER20 DNA MER1_type 1 219 0 1066 206 71 28 chr2 125850347 125850629 -127405954 - MLT1J LTR MaLR -205 306 13 367 248 95 0 chr2 125850664 125850801 -127405782 - MIR SINE MIR -111 151 2 616 259 21 21 chr2 125850938 125851131 -127405452 + L1MD3 LINE L1 7798 7990 -5 573 28 0 0 chr2 125851349 125851420 -127405163 + (TC)n Simple_repeat Simple_repeat 2 72 0 243 0 0 0 chr2 125851419 125851446 -127405137 + (TA)n Simple_repeat Simple_repeat 1 27 0 * 2252 107 0 26 chr2 125851447 125851756 -127404827 - AluSx SINE Alu -11 301 1 525 16 0 0 chr2 125851837 125851899 -127404684 + (TAGA)n Simple_repeat Simple_repeat 2 63 0 216 67 0 0 chr2 125851937 125851967 -127404616 + (GA)n Simple_repeat Simple_repeat 2 31 0 1338 204 16 4 chr2 125851981 125852231 -127404352 - AluJb SINE Alu -59 253 1 396 156 10 104 chr2 125852252 125852277 -127404306 - FLAM SINE Alu -174 128 102 2106 131 91 35 chr2 125852277 125852682 -127403901 - MSTA LTR MaLR 0 428 1 396 156 10 104 chr2 125852682 125852752 -127403831 - FLAM SINE Alu -200 102 42 450 350 44 5 chr2 125853150 125853353 -127403230 - MIR SINE MIR -50 212 2 536 249 244 9 chr2 125853364 125853577 -127403006 + HAL1 LINE L1 637 899 -1608 2149 128 3 10 chr2 125853666 125853971 -127402612 + AluSx SINE Alu 1 303 -9 771 158 8 15 chr2 125853986 125854119 -127402464 + FLAM_C SINE Alu 1 132 -1 417 278 32 16 chr2 125854256 125854382 -127402201 + MER91A DNA MER1_type 14 141 -55 289 239 93 83 chr2 125854441 125854646 -127401937 + L2 LINE L2 2876 3082 -190 3835 184 57 51 chr2 125854713 125856237 -127400346 - MER52A LTR ERV1 0 1755 1 197 303 15 15 chr2 125856277 125856343 -127400240 + MIR SINE MIR 28 93 -169 1963 143 13 16 chr2 125856377 125856684 -127399899 - AluJb SINE Alu -1 311 6 265 391 93 0 chr2 125856685 125856836 -127399747 + MIR SINE MIR 88 252 -10 1016 236 104 32 chr2 125857108 125857254 -127399329 - HsTC2 DNA Tc2 -1 1897 1763 1842 136 3 55 chr2 125857254 125857562 -127399021 + AluJo SINE Alu 1 292 -20 1016 236 104 32 chr2 125857562 125857608 -127398975 - HsTC2 DNA Tc2 -135 1763 1722 2415 88 0 0 chr2 125857608 125857903 -127398680 - AluSq SINE Alu -18 295 1 1016 236 104 32 chr2 125857903 125858149 -127398434 - HsTC2 DNA Tc2 -176 1722 1250 479 257 88 22 chr2 125858145 125858281 -127398302 - HsTC2 DNA Tc2 -1751 147 3 * 394 261 116 36 chr2 125858297 125858435 -127398148 + LTR67 LTR ERVL 74 222 -335 2285 114 0 0 chr2 125858624 125858922 -127397661 - AluSx SINE Alu -14 298 1 446 266 32 62 chr2 125858924 125859124 -127397459 + MLT1J LTR MaLR 25 180 -229 2449 91 3 0 chr2 125859527 125859834 -127396749 - AluSx SINE Alu -4 308 1 548 254 81 12 chr2 125860321 125860494 -127396089 + MLT1J LTR MaLR 224 408 -103 228 194 0 0 chr2 125860744 125860809 -127395774 + Alu SINE Alu 247 311 0 825 129 0 0 chr2 125860811 125860927 -127395656 + FLAM_C SINE Alu 1 116 -17 35 0 0 0 chr2 125860932 125860967 -127395616 + AT_rich Low_complexity Low_complexity 1 35 0 596 287 41 0 chr2 125861000 125861195 -127395388 + MIR SINE MIR 16 218 -44 384 59 0 0 chr2 125862125 125862176 -127394407 + (TTTTG)n Simple_repeat Simple_repeat 5 55 0 2295 100 0 0 chr2 125862176 125862456 -127394127 - AluSx SINE Alu -32 280 1 901 195 0 7 chr2 125863057 125863211 -127393372 + AluJo SINE Alu 5 157 -155 1606 89 163 56 chr2 125863211 125863481 -127393102 - AluSx SINE Alu -13 299 1 608 184 53 0 chr2 125863494 125863608 -127392975 - FLAM_C SINE Alu -13 120 1 609 296 62 0 chr2 125864442 125864668 -127391915 - MIR SINE MIR 0 262 23 431 210 100 0 chr2 125864670 125864770 -127391813 - MER3 DNA MER1_type -28 181 72 782 159 0 36 chr2 125865572 125865735 -127390848 - FLAM_C SINE Alu 0 158 1 1402 276 68 16 chr2 125865823 125866385 -127390198 - L1ME3A LINE L1 -53 6117 5527 320 231 113 25 chr2 125866620 125866780 -127389803 + L2 LINE L2 2745 2918 -396 599 159 80 0 chr2 125868473 125868586 -127387997 + L1MB3 LINE L1 6062 6183 0 249 253 126 0 chr2 125868675 125868762 -127387821 - MIR SINE MIR -72 190 93 187 307 102 34 chr2 125870218 125870306 -127386277 - L2 LINE L2 -43 3229 3136 2252 111 0 10 chr2 125871227 125871533 -127385050 + AluSx SINE Alu 1 303 -9 281 303 56 12 chr2 125871633 125871795 -127384788 + L1MC4a LINE L1 5589 5757 -2051 341 276 138 13 chr2 125872007 125872159 -127384424 + L1MC4a LINE L1 6061 6231 -1577 228 137 20 39 chr2 125873024 125873075 -127383508 - MIR SINE MIR -107 155 106 3076 133 7 65 chr2 125873424 125873979 -127382604 + MER1A DNA MER1_type 1 523 -4 1535 219 73 35 chr2 125874977 125875456 -127381127 + MLT1D LTR MaLR 2 498 -7 239 223 41 50 chr2 125877597 125877755 -127378828 - MIR SINE MIR -14 248 52 554 252 206 14 chr2 125878360 125878642 -127377941 + MER46C DNA MER2_type 1 336 -2 213 234 0 0 chr2 125879333 125879380 -127377203 - MIR SINE MIR -110 152 106 306 226 16 0 chr2 125880362 125880424 -127376159 - L1MC4 LINE L1 -1342 6700 6638 21 36 0 0 chr2 125880582 125880610 -127375973 + AT_rich Low_complexity Low_complexity 1 28 0 2460 88 0 0 chr2 125880624 125880920 -127375663 - AluSg SINE Alu -14 296 1 366 244 91 34 chr2 125880942 125880997 -127375586 - L1MD3 LINE L1 0 7995 7945 1932 144 34 3 chr2 125880997 125881288 -127375295 + AluSx SINE Alu 1 300 -12 366 244 91 34 chr2 125881288 125881469 -127375114 - L1MD3 LINE L1 -50 7945 6101 1384 159 40 0 chr2 125881546 125881823 -127374760 + L1MA8 LINE L1 5993 6280 -11 435 52 0 0 chr2 125882021 125882079 -127374504 + (CTATT)n Simple_repeat Simple_repeat 3 60 0 1920 146 11 0 chr2 125882079 125882359 -127374224 - AluJb SINE Alu -27 285 3 780 241 123 61 chr2 125882411 125882851 -127373732 + MLT1C LTR MaLR 1 467 0 355 220 136 42 chr2 125882921 125883039 -127373544 + AluJo SINE Alu 15 143 -159 234 262 226 0 chr2 125884104 125884188 -127372395 + L2 LINE L2 3152 3254 -18 2038 127 0 56 chr2 125884517 125884839 -127371744 + AluSx SINE Alu 1 304 -8 295 290 30 0 chr2 125885011 125885111 -127371472 - MIR SINE MIR -132 130 28 486 311 28 11 chr2 125885432 125885609 -127370974 - MIR SINE MIR 0 262 83 2528 57 3 0 chr2 125885756 125886054 -127370529 - AluY SINE Alu -12 299 1 609 209 7 7 chr2 125886257 125886396 -127370187 + AluJb SINE Alu 12 150 -162 377 347 48 0 chr2 125886836 125886960 -127369623 + L2 LINE L2 3139 3268 -4 189 107 0 0 chr2 125886980 125887008 -127369575 + (CA)n Simple_repeat Simple_repeat 1 28 0 1455 141 104 63 chr2 125887008 125887277 -127369306 - AluJo SINE Alu -32 280 1 2052 87 79 7 chr2 125888347 125888624 -127367959 - AluSx SINE Alu -13 299 3 450 326 16 37 chr2 125889653 125889843 -127366740 + MIR3 SINE MIR 15 200 -8 292 341 101 0 chr2 125889967 125890096 -127366487 + L3 LINE CR1 1210 1351 -226 183 349 47 9 chr2 125890651 125890757 -127365826 - MIR SINE MIR -147 115 6 334 292 17 25 chr2 125891523 125891643 -127364940 - MIR SINE MIR -109 153 35 1842 169 10 19 chr2 125891848 125892161 -127364422 + AluJb SINE Alu 3 312 0 180 0 0 0 chr2 125892173 125892193 -127364390 + (GGGA)n Simple_repeat Simple_repeat 1 20 0 190 200 317 0 chr2 125892281 125892341 -127364242 - MIR SINE MIR -114 148 70 2227 96 0 3 chr2 125893318 125893600 -127362983 - AluSq SINE Alu -32 281 1 225 0 0 0 chr2 125893687 125893712 -127362871 + (A)n Simple_repeat Simple_repeat 1 25 0 780 158 0 23 chr2 125893767 125893900 -127362683 + FLAM_C SINE Alu 2 131 -2 185 139 0 56 chr2 125895573 125895609 -127360974 + L3 LINE CR1 1524 1557 -20 407 302 0 0 chr2 125895848 125895944 -127360639 - L1MC4 LINE L1 -1333 6709 6614 * 414 289 0 0 chr2 125895914 125896004 -127360579 + L1MC4 LINE L1 6614 6703 -1339 342 288 19 45 chr2 125895948 125896055 -127360528 - L1MC4 LINE L1 -1339 6983 6875 * 1895 178 3 0 chr2 125896055 125896348 -127360235 - AluJo SINE Alu -18 294 1 342 288 19 45 chr2 125896348 125896394 -127360189 - L1MC4 LINE L1 -1447 6875 1942 1734 143 89 0 chr2 125896482 125896741 -127359842 + AluSx SINE Alu 1 282 -30 183 42 0 0 chr2 125896743 125896767 -127359816 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 259 328 86 43 chr2 125896940 125897126 -127359457 - L3 LINE CR1 -33 1544 1351 182 372 85 0 chr2 125898794 125898888 -127357695 - MIR SINE MIR -91 117 16 908 161 29 40 chr2 125901725 125901899 -127354684 - FAM SINE Alu -3 172 1 951 159 55 6 chr2 125902679 125902842 -127353741 - FAM SINE Alu -4 171 1 22 0 0 0 chr2 125902978 125903000 -127353583 + AT_rich Low_complexity Low_complexity 1 22 0 2216 84 7 14 chr2 125903480 125903777 -127352806 + AluSx SINE Alu 3 297 -15 431 154 0 26 chr2 125904358 125904436 -127352147 - FRAM/FAM SINE Alu -101 75 1 340 290 122 0 chr2 125904436 125904567 -127352016 - MIR SINE MIR -96 166 20 1115 157 96 37 chr2 125905911 125906185 -127350398 + MLT1E1 LTR MaLR 3 252 -372 1081 226 54 20 chr2 125906197 125906460 -127350123 - L1MC4 LINE L1 -4718 1710 1430 2481 66 0 0 chr2 125906460 125906764 -127349819 + AluSg SINE Alu 1 304 -6 1081 226 54 20 chr2 125906764 125906854 -127349729 - L1MC4 LINE L1 -4998 1430 1345 1089 216 55 3 chr2 125906880 125907172 -127349411 + MLT1E1 LTR MaLR 316 622 -2 306 220 110 40 chr2 125907272 125907372 -127349211 - L2 LINE L2 0 3313 3207 252 326 194 0 chr2 125907909 125908007 -127348576 + MER5B DNA MER1_type 61 177 -1 861 224 68 4 chr2 125909865 125910102 -127346481 + L1ME LINE L1 5476 5727 -437 236 274 110 0 chr2 125911785 125911858 -127344725 + Charlie8 DNA MER1_type 118 198 -2219 27 29 0 0 chr2 125912063 125912097 -127344486 + AT_rich Low_complexity Low_complexity 1 34 0 198 169 237 0 chr2 125912523 125912582 -127344001 + MIR3 SINE MIR 126 198 -10 23 0 0 0 chr2 125914133 125914156 -127342427 + AT_rich Low_complexity Low_complexity 1 23 0 2052 119 40 0 chr2 125914713 125914990 -127341593 - AluSx SINE Alu -22 290 3 216 238 276 19 chr2 125915123 125915228 -127341355 + L2 LINE L2 3141 3272 0 203 308 15 0 chr2 125915916 125915981 -127340602 + L2 LINE L2 3247 3312 -1 290 132 0 73 chr2 125916334 125916402 -127340181 - AluJ/FRAM SINE Alu -7 295 233 2089 120 3 3 chr2 125916853 125917145 -127339438 - AluSx SINE Alu -20 292 1 26 0 0 0 chr2 125917424 125917450 -127339133 + AT_rich Low_complexity Low_complexity 1 26 0 1911 67 8 0 chr2 125917956 125918196 -127338387 + AluY SINE Alu 64 305 -6 2585 176 53 16 chr2 125918197 125918760 -127337823 + L1MB3 LINE L1 5598 6181 -2 619 167 0 17 chr2 125918776 125918896 -127337687 + L1MB7 LINE L1 6015 6132 -52 313 200 62 52 chr2 125918888 125918903 -127337680 + L1ME3A LINE L1 1545 1558 -4982 * 1988 148 0 3 chr2 125918903 125919201 -127337382 + AluJb SINE Alu 1 297 -15 313 200 62 52 chr2 125919201 125919347 -127337236 + L1ME3A LINE L1 1558 1690 -4850 312 241 129 14 chr2 125919410 125919536 -127337047 + L1ME3A LINE L1 1703 1929 -4611 1554 262 106 37 chr2 125919649 125919927 -127336656 + L1ME3A LINE L1 4287 4544 -2020 2142 98 11 0 chr2 125919927 125920213 -127336370 + AluSp SINE Alu 1 289 -24 1554 262 106 37 chr2 125920213 125920301 -127336282 + L1ME3A LINE L1 4544 4625 -1939 2130 120 0 0 chr2 125920301 125920592 -127335991 + AluSg1 SINE Alu 2 292 -17 1554 262 106 37 chr2 125920592 125922152 -127334431 + L1ME3A LINE L1 4625 6340 -224 717 149 35 0 chr2 125922158 125922272 -127334311 + FLAM_A SINE Alu 4 121 -12 2200 99 7 3 chr2 125922301 125922593 -127333990 + AluSg SINE Alu 1 293 -17 356 322 100 28 chr2 125923115 125923295 -127333288 - MIR SINE MIR -41 221 29 436 275 22 22 chr2 125924367 125924505 -127332078 + MARNA DNA Mariner 83 220 -366 825 221 26 5 chr2 125924741 125924936 -127331647 + MER3 DNA MER1_type 9 207 -2 378 262 31 7 chr2 125925022 125925200 -127331383 - Charlie8 DNA MER1_type -2196 221 2 389 231 28 70 chr2 125925693 125925836 -127330747 - MIR SINE MIR -57 205 69 23 33 0 0 chr2 125926220 125926250 -127330333 + AT_rich Low_complexity Low_complexity 1 30 0 576 243 45 60 chr2 125926398 125926666 -127329917 + HAL1 LINE L1 1582 1845 -662 2408 105 0 6 chr2 125926693 125927007 -127329576 - AluSx SINE Alu 0 312 1 284 273 91 0 chr2 125927390 125927500 -127329083 - L1MC5 LINE L1 -569 7392 7273 434 192 61 0 chr2 125927999 125928098 -127328485 + L1MB7 LINE L1 5557 5661 -505 17594 159 23 12 chr2 125928117 125931517 -127325066 + L1PA14 LINE L1 1 3359 -4240 2499 66 0 3 chr2 125931517 125931821 -127324762 + AluY SINE Alu 1 303 -8 17594 159 23 12 chr2 125931821 125935149 -127321434 + L1PA14 LINE L1 3359 7595 -4 33 0 0 0 chr2 125935150 125935183 -127321400 + AT_rich Low_complexity Low_complexity 1 33 0 1980 111 7 4 chr2 125935215 125935525 -127321058 + AluSc SINE Alu 1 311 0 1597 201 46 62 chr2 125935614 125935734 -127320849 + L1MB7 LINE L1 5701 5821 -363 1642 194 3 13 chr2 125935734 125936033 -127320550 + AluJb SINE Alu 10 305 -7 1597 201 46 62 chr2 125936033 125936122 -127320461 + L1MB7 LINE L1 5821 5910 -274 1552 149 47 64 chr2 125936122 125936418 -127320165 + AluJo SINE Alu 1 291 -21 1597 201 46 62 chr2 125936418 125936689 -127319894 + L1MB7 LINE L1 5910 6174 -10 748 220 107 70 chr2 125937417 125937486 -127319097 + L2 LINE L2 2626 2691 -622 1958 120 53 11 chr2 125937486 125937770 -127318813 - AluSg SINE Alu -14 296 1 748 220 107 70 chr2 125937770 125937785 -127318798 + L2 LINE L2 2691 2704 -609 1926 129 71 10 chr2 125937785 125938079 -127318504 - AluSx SINE Alu 0 312 1 748 220 107 70 chr2 125938079 125938391 -127318192 + L2 LINE L2 2704 3030 -283 2241 89 0 0 chr2 125939097 125939397 -127317186 + AluSg SINE Alu 1 300 0 651 182 0 0 chr2 125939469 125939579 -127317004 + AluSg/x SINE Alu 202 311 -1 2408 92 0 0 chr2 125939594 125939897 -127316686 + AluSg1 SINE Alu 1 303 -6 2096 171 69 10 chr2 125940162 125940566 -127316017 + MSTC LTR MaLR 1 428 0 2887 188 41 33 chr2 125940960 125941662 -127314921 + L1MB7 LINE L1 5459 6166 -18 246 62 0 0 chr2 125941670 125941702 -127314881 + (CAT)n Simple_repeat Simple_repeat 2 33 0 1068 134 10 35 chr2 125941712 125941914 -127314669 + L1MD3 LINE L1 7733 7929 -66 324 284 40 67 chr2 125941937 125942135 -127314448 + L1MC4a LINE L1 5743 5939 -182 269 227 30 0 chr2 125942475 125942541 -127314042 + L1MC5 LINE L1 7833 7900 -61 1004 145 0 20 chr2 125942549 125942701 -127313882 - AluSq SINE Alu -37 276 128 2174 107 43 0 chr2 125942701 125943000 -127313583 - AluSx SINE Alu 0 312 1 1240 138 95 0 chr2 125943291 125943501 -127313082 + MER30 DNA MER1_type 1 230 0 301 308 146 8 chr2 125944478 125944608 -127311975 - MIR SINE MIR -113 149 2 310 338 96 18 chr2 125944689 125944759 -127311824 + MIR SINE MIR 20 83 -179 2254 121 0 0 chr2 125944759 125945064 -127311519 + AluSq SINE Alu 1 305 -8 310 338 96 18 chr2 125945064 125945212 -127311371 + MIR SINE MIR 83 255 -7 279 225 127 63 chr2 125945806 125945948 -127310635 + MER104 DNA Tc2 30 180 0 243 250 156 16 chr2 125945974 125946102 -127310481 - L1ME4a LINE L1 -20 6101 5956 1873 173 3 3 chr2 125946312 125946619 -127309964 - AluJo SINE Alu -1 311 5 2233 117 3 0 chr2 125946668 125946975 -127309608 + AluSg SINE Alu 1 308 -2 483 332 50 14 chr2 125947664 125947884 -127308699 + MIR SINE MIR 3 230 -32 419 248 46 9 chr2 125948303 125948412 -127308171 - MER94 DNA DNA -17 117 5 28 48 0 0 chr2 125951238 125951280 -127305303 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr2 125952322 125952345 -127304238 + AT_rich Low_complexity Low_complexity 1 23 0 1915 156 3 10 chr2 125952709 125953023 -127303560 + AluJb SINE Alu 1 312 0 1751 153 21 7 chr2 125954530 125954812 -127301771 - AluJo SINE Alu -26 286 1 507 259 76 62 chr2 125954886 125955110 -127301473 + MIR SINE MIR 2 228 -34 297 307 80 0 chr2 125956480 125956568 -127300015 + MIR SINE MIR 27 121 -141 186 313 31 0 chr2 125960221 125960285 -127296298 + MIR SINE MIR 81 146 -62 22 35 0 0 chr2 125960966 125960995 -127295588 + AT_rich Low_complexity Low_complexity 1 29 0 1910 133 32 3 chr2 125960995 125961280 -127295303 - AluSx SINE Alu -19 293 1 2042 140 3 0 chr2 125961282 125961575 -127295008 - AluSx SINE Alu -18 294 1 410 307 114 76 chr2 125963641 125964090 -127292493 + L2 LINE L2 2807 3272 0 28 0 0 0 chr2 125965143 125965171 -127291412 + AT_rich Low_complexity Low_complexity 1 28 0 1796 171 10 10 chr2 125965599 125965909 -127290674 + AluJo SINE Alu 3 312 0 271 316 13 0 chr2 125966009 125966161 -127290422 + L1 LINE L1 2380 2533 -3613 366 281 36 54 chr2 125966296 125966463 -127290120 + L1 LINE L1 2664 2827 -3319 37 23 0 0 chr2 125966741 125966785 -127289798 + AT_rich Low_complexity Low_complexity 1 44 0 313 327 36 0 chr2 125967425 125967535 -127289048 + L2 LINE L2 3199 3312 -1 35 0 0 0 chr2 125967707 125967742 -127288841 + AT_rich Low_complexity Low_complexity 1 35 0 472 288 85 17 chr2 125968583 125968760 -127287823 - MIR SINE MIR -70 192 4 422 244 113 17 chr2 125971065 125971180 -127285403 - MIR SINE MIR -61 201 76 457 310 198 34 chr2 125971704 125971864 -127284719 - L1M4 LINE L1 -1251 4895 4763 1889 132 0 14 chr2 125971864 125972151 -127284432 - AluSx SINE Alu -29 283 1 457 310 198 34 chr2 125972151 125972772 -127283811 - L1M4 LINE L1 -1383 4763 3954 2210 121 7 0 chr2 125972772 125973078 -127283505 + AluSx SINE Alu 1 308 -4 457 310 198 34 chr2 125973078 125973169 -127283414 - L1M4 LINE L1 -2192 3954 3879 2001 148 0 3 chr2 125973210 125973507 -127283076 + AluSx SINE Alu 6 301 -11 233 284 45 11 chr2 125973567 125973655 -127282928 - L1M4 LINE L1 -2484 3662 3572 21 0 0 0 chr2 125973662 125973683 -127282900 + AT_rich Low_complexity Low_complexity 1 21 0 1681 179 3 33 chr2 125973997 125974298 -127282285 - AluJb SINE Alu -20 292 1 1061 147 12 0 chr2 125974441 125974604 -127281979 + AluSx SINE Alu 2 166 -146 776 154 0 29 chr2 125974771 125974907 -127281676 + FLAM_C SINE Alu 1 132 -1 2338 99 3 0 chr2 125974994 125975306 -127281277 - AluSp SINE Alu 0 313 1 653 229 64 2 chr2 125975490 125975682 -127280901 - L1MD2 LINE L1 -2 7925 6176 717 255 60 53 chr2 125975736 125975759 -127280824 - L1MEd LINE L1 -4867 1252 1231 2032 164 3 0 chr2 125975759 125976063 -127280520 - AluSx SINE Alu -7 305 1 717 255 60 53 chr2 125976063 125976147 -127280436 - L1MEd LINE L1 -4888 1231 1149 2175 125 0 0 chr2 125976147 125976443 -127280140 - AluSx SINE Alu -16 296 1 717 255 60 53 chr2 125976443 125976695 -127279888 - L1MEd LINE L1 -4970 1149 953 1664 160 30 33 chr2 125976695 125976995 -127279588 - AluJo SINE Alu -13 299 1 717 255 60 53 chr2 125976995 125977055 -127279528 - L1MEd LINE L1 -5166 953 895 339 380 55 21 chr2 125977157 125977394 -127279189 - L1MEd LINE L1 -5450 669 425 448 324 112 35 chr2 125977718 125978085 -127278498 - L1MEd LINE L1 -5283 836 442 8383 29 7 1 chr2 125978291 125979373 -127277210 - L1P LINE L1 -2223 3923 2836 3934 20 2 0 chr2 125979373 125979827 -127276756 + L1PA2 LINE L1 5697 6153 -2 230 323 93 6 chr2 125979850 125980011 -127276572 - L1MEd LINE L1 -5900 219 45 1845 166 30 0 chr2 125980150 125980446 -127276137 + AluJb SINE Alu 1 305 -7 1853 121 3 64 chr2 125981052 125981366 -127275217 + AluJb SINE Alu 2 296 -16 2158 123 3 10 chr2 125982081 125982382 -127274201 - AluSx SINE Alu -9 303 5 356 288 74 43 chr2 125983259 125983422 -127273161 + MER5A DNA MER1_type 11 189 0 301 320 0 0 chr2 125983872 125983950 -127272633 + L2 LINE L2 3195 3272 0 23 33 0 0 chr2 125984035 125984065 -127272518 + AT_rich Low_complexity Low_complexity 1 30 0 290 290 119 6 chr2 125985864 125986031 -127270552 - MIR SINE MIR -55 207 16 403 328 64 10 chr2 125988877 125989081 -127267502 + MIR SINE MIR 47 261 -1 2320 101 0 0 chr2 125989657 125989953 -127266630 + AluY SINE Alu 1 296 -15 2332 72 0 0 chr2 125992116 125992395 -127264188 + AluSx SINE Alu 1 279 -33 246 62 0 0 chr2 125992395 125992427 -127264156 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 1706 191 0 26 chr2 125992612 125992921 -127263662 + AluJo SINE Alu 1 301 -11 194 263 0 0 chr2 125992944 125992982 -127263601 - L2 LINE L2 -49 3223 3186 285 247 52 0 chr2 125993655 125993732 -127262851 + MER20B DNA MER1_type 54 134 -649 1268 190 19 91 chr2 125993765 125994058 -127262525 + MLT1A2 LTR MaLR 24 288 -86 1170 74 211 0 chr2 125994058 125994248 -127262335 + MER30 DNA MER1_type 1 230 0 1268 190 19 91 chr2 125994248 125994318 -127262265 + MLT1A2 LTR MaLR 288 361 -13 3416 147 23 27 chr2 125994896 125995218 -127261365 + L1MA8 LINE L1 5631 5953 -338 1332 189 124 8 chr2 125995218 125995483 -127261100 + AluJo SINE Alu 1 296 -6 3416 147 23 27 chr2 125995483 125995821 -127260762 + L1MA8 LINE L1 5953 6288 -3 1046 156 156 74 chr2 125995829 125996072 -127260511 + AluJo SINE Alu 5 267 -45 450 118 83 14 chr2 125996074 125996218 -127260365 + GA-rich Low_complexity Low_complexity 2 155 0 27 0 0 0 chr2 125996248 125996275 -127260308 + AT_rich Low_complexity Low_complexity 1 27 0 324 48 0 0 chr2 125997055 125997097 -127259486 + (CA)n Simple_repeat Simple_repeat 1 42 0 626 246 0 0 chr2 125998802 125998932 -127257651 - FLAM_A SINE Alu -1 132 3 1072 202 20 10 chr2 126001294 126001497 -127255086 - AluJb SINE Alu -20 292 88 200 83 0 28 chr2 126003440 126003476 -127253107 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 7272 21 2 1 chr2 126003476 126004565 -127252018 - L1PA3 LINE L1 -24 6131 5041 8925 25 0 1 chr2 126004566 126005665 -127250918 + L1PA3 LINE L1 3929 5026 -1120 315 178 0 14 chr2 126005735 126005808 -127250775 + L1MB5 LINE L1 5796 5867 -307 238 98 0 0 chr2 126005811 126005852 -127250731 + L1MB5 LINE L1 6124 6164 -10 6713 142 29 3 chr2 126006419 126008371 -127248212 - L1PA11 LINE L1 -2 6487 4481 1084 222 95 0 chr2 126008400 126008706 -127247877 - L1PA11 LINE L1 -4933 1528 1194 536 263 16 38 chr2 126009075 126009261 -127247322 - MLT1K LTR MaLR -109 479 298 243 0 0 0 chr2 126009902 126009929 -127246654 + (T)n Simple_repeat Simple_repeat 1 27 0 358 206 0 0 chr2 126009952 126010015 -127246568 - AluJ/FLAM SINE Alu -239 63 1 524 314 101 33 chr2 126010095 126010550 -127246033 - L1ME4a LINE L1 -266 5855 5370 1668 177 7 4 chr2 126010626 126010903 -127245680 + AluJo SINE Alu 18 295 -17 238 250 14 0 chr2 126011917 126011989 -127244594 + L1ME LINE L1 177 249 -5956 1584 275 86 75 chr2 126012053 126013746 -127242837 + L1ME LINE L1 169 1880 -4516 2299 84 0 0 chr2 126014063 126014359 -127242224 + AluY SINE Alu 1 296 -15 210 277 64 53 chr2 126016737 126016831 -127239752 + L2 LINE L2 3204 3298 -15 551 224 182 8 chr2 126017663 126017927 -127238656 + L1M4 LINE L1 3703 4012 -2134 2032 120 0 0 chr2 126017927 126018210 -127238373 + AluSx SINE Alu 1 283 -29 310 57 38 0 chr2 126018212 126018265 -127238318 + (CA)n Simple_repeat Simple_repeat 2 56 0 780 51 74 12 chr2 126018315 126018656 -127237927 + (CA)n Simple_repeat Simple_repeat 1 362 0 1250 222 147 9 chr2 126018694 126019131 -127237452 + L1M4 LINE L1 4040 4536 -1610 319 224 79 0 chr2 126023082 126023158 -127233425 + L1MC4 LINE L1 6614 6695 -1347 225 152 0 0 chr2 126023164 126023210 -127233373 - LTR66 LTR ERVL -171 439 394 308 361 33 0 chr2 126024480 126024602 -127231981 - L2 LINE L2 -25 3247 3122 1129 106 17 45 chr2 126025189 126025368 -127231215 + AluSq SINE Alu 1 174 -139 233 321 272 17 chr2 126025425 126025712 -127230871 - L2 LINE L2 -25 3247 2888 311 275 55 138 chr2 126026602 126027002 -127229581 + L2 LINE L2 2344 2710 -604 1451 181 59 0 chr2 126027028 126027331 -127229252 - L1MC3 LINE L1 -170 7615 7295 1531 195 87 45 chr2 126027334 126027760 -127228823 - L1MC3 LINE L1 -636 7149 6706 193 316 68 17 chr2 126027991 126028108 -127228475 - MIR SINE MIR -109 153 31 2242 167 59 20 chr2 126031641 126031727 -127224856 + L1MB8 LINE L1 5111 5192 -982 2444 61 0 0 chr2 126031727 126032022 -127224561 + AluY SINE Alu 13 307 -4 2242 167 59 20 chr2 126032022 126032551 -127224032 + L1MB8 LINE L1 5192 5761 -413 378 165 24 12 chr2 126032565 126032650 -127223933 + L1MB8 LINE L1 6087 6172 -6 6287 119 51 12 chr2 126032665 126034339 -127222244 + L1MA3 LINE L1 4553 6305 0 2104 127 0 7 chr2 126034344 126034644 -127221939 + AluY SINE Alu 1 298 -13 2199 102 0 3 chr2 126034646 126034949 -127221634 + AluY SINE Alu 1 302 -9 2324 96 0 0 chr2 126034984 126035285 -127221298 + AluSq SINE Alu 1 301 -12 23 54 0 0 chr2 126035285 126035322 -127221261 + AT_rich Low_complexity Low_complexity 1 37 0 535 247 70 36 chr2 126035439 126035635 -127220948 - MIR SINE MIR -19 243 40 1538 149 4 4 chr2 126036438 126036706 -127219877 + L1MA4 LINE L1 5753 6020 -280 356 172 35 0 chr2 126036711 126036798 -127219785 + L1MB4 LINE L1 6091 6180 0 222 360 70 68 chr2 126036801 126037301 -127219282 - L2 LINE L2 -778 2536 2036 2007 108 0 21 chr2 126037317 126037630 -127218953 - AluY SINE Alu 0 307 1 953 114 8 0 chr2 126037633 126037765 -127218818 - AluSq/x SINE Alu -180 133 1 1879 142 23 32 chr2 126037803 126038112 -127218471 - AluSx SINE Alu -6 306 1 3719 173 39 30 chr2 126038117 126039159 -127217424 + L1MB7 LINE L1 5078 6137 -47 22 56 0 0 chr2 126039170 126039206 -127217377 + AT_rich Low_complexity Low_complexity 1 36 0 277 210 49 25 chr2 126039335 126039416 -127217167 + MER50 LTR ERV1 518 600 -134 1005 203 105 3 chr2 126039437 126039723 -127216860 + L1M4 LINE L1 3962 4276 -1870 872 131 23 11 chr2 126039889 126040064 -127216519 + GA-rich Low_complexity Low_complexity 1 177 0 299 192 13 39 chr2 126040065 126040143 -127216440 + A-rich Low_complexity Low_complexity 5 80 0 223 341 31 23 chr2 126041320 126041449 -127215134 + MIR3 SINE MIR 29 158 -50 * 264 345 43 9 chr2 126041428 126041544 -127215039 - L2 LINE L2 -713 2601 2482 1537 326 64 32 chr2 126041795 126042652 -127213931 - L2 LINE L2 -1 3312 2420 218 325 12 0 chr2 126042995 126043078 -127213505 - MIR SINE MIR 0 262 179 2403 94 0 3 chr2 126043554 126043862 -127212721 + AluSq SINE Alu 1 307 -6 234 208 75 0 chr2 126044204 126044257 -127212326 - L2 LINE L2 -1 3312 3256 411 239 43 6 chr2 126044341 126044504 -127212079 - MER117 DNA MER1_type -26 171 3 30 0 0 0 chr2 126045458 126045488 -127211095 + AT_rich Low_complexity Low_complexity 1 30 0 409 234 13 51 chr2 126045548 126045706 -127210877 + HAL1 LINE L1 868 1019 -1488 4130 226 64 67 chr2 126045718 126048222 -127208361 + L1M4 LINE L1 14 2524 -4120 553 229 66 0 chr2 126048222 126048344 -127208239 - FLAM_A SINE Alu -2 131 2 4130 226 64 67 chr2 126048344 126048787 -127207796 + L1M4 LINE L1 2524 2967 -3677 1828 152 14 7 chr2 126048787 126049076 -127207507 - AluJb SINE Alu -18 294 4 4130 226 64 67 chr2 126049076 126049161 -127207422 + L1M4 LINE L1 2967 3051 -3593 1878 173 0 0 chr2 126049161 126049450 -127207133 + AluSx SINE Alu 1 289 -23 4130 226 64 67 chr2 126049450 126050150 -127206433 + L1M4 LINE L1 3051 3989 -2655 1350 159 9 4 chr2 126050201 126050427 -127206156 + AluJb SINE Alu 81 307 -5 243 88 0 0 chr2 126050442 126050476 -127206107 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 294 301 42 0 chr2 126050476 126050619 -127205964 + HAL1 LINE L1 1732 1880 -627 787 245 70 70 chr2 126050625 126050911 -127205672 + HAL1 LINE L1 1961 2249 -258 2298 95 3 0 chr2 126050911 126051207 -127205376 + AluSp SINE Alu 1 297 -16 787 245 70 70 chr2 126051207 126051467 -127205116 + HAL1 LINE L1 2248 2507 0 27 0 0 0 chr2 126053025 126053052 -127203531 + AT_rich Low_complexity Low_complexity 1 27 0 3132 166 22 9 chr2 126053158 126053712 -127202871 - MER68 LTR ERV1 0 562 2 355 324 20 20 chr2 126054437 126054585 -127201998 + MIR3 SINE MIR 38 185 -23 188 309 61 50 chr2 126055996 126056177 -127200406 - L2 LINE L2 -271 3001 2819 496 216 26 125 chr2 126056195 126056350 -127200233 + L1MC4 LINE L1 7715 7835 -207 2275 75 24 14 chr2 126056350 126056643 -127199940 + AluSg SINE Alu 1 296 -14 496 216 26 125 chr2 126056643 126056751 -127199832 + L1MC4 LINE L1 7835 7952 -90 364 200 95 21 chr2 126057081 126057176 -127199407 + MLT1A2 LTR MaLR 1 102 -272 1378 194 14 39 chr2 126057176 126057459 -127199124 + AluJo SINE Alu 1 276 -36 288 0 0 0 chr2 126057464 126057496 -127199087 + (T)n Simple_repeat Simple_repeat 1 32 0 426 217 36 0 chr2 126057511 126057594 -127198989 + AluS SINE Alu 3 88 -225 1946 74 0 8 chr2 126057617 126057861 -127198722 + AluSg SINE Alu 64 305 -5 847 215 138 42 chr2 126057861 126058121 -127198462 + MLT1A2 LTR MaLR 90 374 0 2230 99 0 32 chr2 126058190 126058504 -127198079 + AluSx SINE Alu 1 304 -8 323 233 3 5 chr2 126058739 126058827 -127197756 + MIR SINE MIR 61 147 -61 212 59 88 0 chr2 126058855 126058889 -127197694 - L2 LINE L2 -5 3308 3272 262 249 85 129 chr2 126058895 126059237 -127197346 - MER102b DNA MER1_type -11 330 4 409 291 55 16 chr2 126060466 126060648 -127195935 + MLT1L LTR MaLR 115 303 -312 384 191 130 119 chr2 126060649 126060942 -127195641 + L1MC5 LINE L1 7616 7911 -50 311 276 9 38 chr2 126061108 126061213 -127195370 + MLT1L LTR MaLR 514 615 0 224 289 0 0 chr2 126061715 126061767 -127194816 + (TG)n Simple_repeat Simple_repeat 1 52 0 181 174 159 0 chr2 126062673 126062742 -127193841 - MIR SINE MIR -125 137 58 189 74 0 0 chr2 126063887 126063914 -127192669 + (CAAAAA)n Simple_repeat Simple_repeat 3 29 0 21 57 0 0 chr2 126063959 126063994 -127192589 + AT_rich Low_complexity Low_complexity 1 35 0 2048 144 0 7 chr2 126064058 126064363 -127192220 - AluSx SINE Alu -9 303 1 546 236 45 19 chr2 126064932 126065089 -127191494 - L1ME2 LINE L1 -18 6146 5986 256 204 38 121 chr2 126066075 126066207 -127190376 - L1ME2 LINE L1 -427 5694 5574 3631 207 113 9 chr2 126066470 126067364 -127189219 + L1MD2 LINE L1 5372 6358 -1 386 233 78 0 chr2 126067703 126067819 -127188764 - MIR SINE MIR -56 206 82 24 53 0 0 chr2 126070207 126070245 -127186338 + GC_rich Low_complexity Low_complexity 1 38 0 2431 51 7 3 chr2 126070916 126071212 -127185371 + AluY SINE Alu 1 297 -14 2247 69 0 0 chr2 126071214 126071490 -127185093 + AluSc SINE Alu 25 300 -9 22 0 0 0 chr2 126071882 126071904 -127184679 + AT_rich Low_complexity Low_complexity 1 22 0 2430 164 90 14 chr2 126071952 126072451 -127184132 + L1MC3 LINE L1 7147 7683 -102 511 185 109 0 chr2 126072992 126073111 -127183472 + MIR SINE MIR 106 237 -25 845 165 41 24 chr2 126073113 126073283 -127183300 + LTR54 LTR ERV1 327 499 -11 206 281 78 60 chr2 126073320 126073487 -127183096 + L2 LINE L2 3142 3311 -2 1972 127 37 3 chr2 126074130 126074430 -127182153 - AluSx SINE Alu -2 310 1 1727 149 0 52 chr2 126074588 126074896 -127181687 + AluJb SINE Alu 1 292 -20 1668 165 3 42 chr2 126075254 126075563 -127181020 - AluJb SINE Alu -15 297 1 2258 126 45 25 chr2 126075749 126076106 -127180477 - THE1B LTR MaLR 0 364 1 195 250 62 115 chr2 126077021 126077056 -127179527 + L2 LINE L2 3128 3163 -109 448 192 88 16 chr2 126077056 126077181 -127179402 + MER94 DNA DNA 1 134 0 195 250 62 115 chr2 126077181 126077241 -127179342 + L2 LINE L2 3163 3218 -54 636 132 99 0 chr2 126078378 126078499 -127178084 - L1M4 LINE L1 -2430 3716 3584 1647 109 25 109 chr2 126078521 126078702 -127177881 - AluSx SINE Alu -19 293 149 1951 119 7 34 chr2 126078702 126078996 -127177587 - AluSg SINE Alu -24 286 1 1647 109 25 109 chr2 126078996 126079134 -127177449 - AluSx SINE Alu -163 149 1 239 299 108 30 chr2 126079272 126079439 -127177144 - L1ME LINE L1 -354 5767 5588 1919 126 3 11 chr2 126079884 126080169 -127176414 - AluSx SINE Alu -29 283 1 825 225 45 112 chr2 126080810 126081196 -127175387 + MSTC LTR MaLR 1 355 -73 803 126 7 37 chr2 126081196 126081331 -127175252 - FLAM_C SINE Alu -2 131 1 825 225 45 112 chr2 126081331 126081389 -127175194 + MSTC LTR MaLR 355 415 -13 2193 121 10 0 chr2 126082281 126082579 -127174004 + AluSq SINE Alu 1 301 -12 366 191 11 80 chr2 126083125 126083313 -127173270 + C-rich Low_complexity Low_complexity 4 178 0 361 281 72 61 chr2 126083413 126083676 -127172907 - MLT1L LTR MaLR -327 288 23 190 275 87 0 chr2 126083705 126083774 -127172809 - L2 LINE L2 -90 3223 3149 291 257 184 0 chr2 126083997 126084106 -127172477 + MIR3 SINE MIR 67 195 -13 1871 120 17 17 chr2 126084492 126084783 -127171800 - AluSx SINE Alu -9 303 13 244 323 30 22 chr2 126085929 126086130 -127170453 + MIR SINE MIR 8 259 -3 303 213 83 37 chr2 126086149 126086257 -127170326 - L2 LINE L2 -1 3312 3200 1996 194 84 76 chr2 126086864 126086948 -127169635 - L1MC4 LINE L1 -280 7762 7680 2289 61 10 10 chr2 126086948 126087242 -127169341 - AluY SINE Alu -17 294 1 2279 80 10 0 chr2 126087242 126087530 -127169053 - AluSp SINE Alu -22 291 1 1996 194 84 76 chr2 126087530 126087608 -127168975 - L1MC4 LINE L1 -362 7680 7604 2232 96 3 22 chr2 126087608 126087921 -127168662 - AluSq SINE Alu -6 307 1 1996 194 84 76 chr2 126087921 126088313 -127168270 - L1MC4 LINE L1 -438 7604 7198 2254 70 30 3 chr2 126088313 126088611 -127167972 + AluY SINE Alu 1 306 -5 1996 194 84 76 chr2 126088611 126088686 -127167897 - L1MC4 LINE L1 -844 7198 7125 5594 140 21 21 chr2 126089002 126089652 -127166931 - L1 LINE L1 -1112 5034 4385 2163 136 0 0 chr2 126089652 126089960 -127166623 - AluSx SINE Alu -4 308 1 5594 140 21 21 chr2 126089960 126090285 -127166298 - L1 LINE L1 -1761 4385 4056 2291 95 7 3 chr2 126090285 126090580 -127166003 + AluSg SINE Alu 3 298 -12 5594 140 21 21 chr2 126090580 126090630 -127165953 - L1 LINE L1 -2089 4057 4008 2326 114 0 3 chr2 126091316 126091623 -127164960 - AluSx SINE Alu -6 306 1 2137 123 10 3 chr2 126091655 126091963 -127164620 - AluSx SINE Alu -2 310 1 2249 122 0 0 chr2 126092247 126092550 -127164033 - AluSg SINE Alu -7 303 1 484 202 194 0 chr2 126093048 126093172 -127163411 + MIR SINE MIR 1 148 -114 26 0 0 0 chr2 126094276 126094302 -127162281 + AT_rich Low_complexity Low_complexity 1 26 0 1142 182 59 0 chr2 126094303 126094472 -127162111 - AluSg/x SINE Alu -11 301 117 216 67 0 0 chr2 126094472 126094502 -127162081 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1142 182 59 0 chr2 126094502 126094535 -127162048 - AluSg/x SINE Alu -195 117 87 354 225 21 120 chr2 126096010 126096152 -127160431 - L2 LINE L2 -1 3312 3185 212 351 36 18 chr2 126096182 126096293 -127160290 - L2 LINE L2 -232 3081 2969 269 339 41 41 chr2 126096337 126096532 -127160051 - L2 LINE L2 -423 2891 2697 1957 123 46 3 chr2 126096541 126096826 -127159757 + AluSx SINE Alu 1 297 -15 407 179 0 0 chr2 126096826 126096904 -127159679 + L1 LINE L1 2531 2608 -3538 1685 125 0 12 chr2 126096904 126097144 -127159439 + AluSx SINE Alu 1 237 -75 2317 77 0 0 chr2 126097275 126097560 -127159023 + AluY SINE Alu 10 294 -17 862 137 0 15 chr2 126097731 126097862 -127158721 + AluSq/x SINE Alu 1 129 -184 2084 132 7 0 chr2 126098082 126098377 -127158206 - AluSx SINE Alu -15 297 1 841 232 19 0 chr2 126098733 126098940 -127157643 + L1MD2 LINE L1 6134 6344 -15 799 116 136 39 chr2 126099052 126099207 -127157376 + L1MA8 LINE L1 5957 6126 -165 2049 80 4 0 chr2 126099211 126099462 -127157121 + AluY SINE Alu 47 298 -13 2394 97 0 0 chr2 126099470 126099770 -127156813 + AluSx SINE Alu 1 300 -12 249 315 169 11 chr2 126100129 126100307 -127156276 - MIR SINE MIR -14 248 43 488 283 78 0 chr2 126101395 126101575 -127155008 + MIR SINE MIR 47 240 -22 923 221 83 86 chr2 126101618 126101957 -127154626 - MER46C DNA MER2_type 0 338 1 661 203 37 37 chr2 126102644 126102807 -127153776 + MER58B DNA MER1_type 179 341 0 6720 108 22 28 chr2 126103032 126103207 -127153376 + L1MA5A LINE L1 5084 5259 -1038 620 101 45 0 chr2 126103207 126103296 -127153287 - HY4 scRNA scRNA 0 93 1 6720 108 22 28 chr2 126103296 126104331 -127152252 + L1MA5A LINE L1 5259 6287 -10 309 129 14 29 chr2 126104519 126104589 -127151994 + AluJ/FLAM SINE Alu 1 69 -233 2440 74 0 0 chr2 126105516 126105814 -127150769 - AluSg SINE Alu -12 298 1 250 182 20 30 chr2 126107186 126107285 -127149298 + A-rich Low_complexity Low_complexity 3 100 0 2148 103 24 0 chr2 126107571 126107863 -127148720 - AluSx SINE Alu -13 299 1 254 289 0 12 chr2 126108040 126108123 -127148460 - MIR SINE MIR -99 163 82 229 288 14 14 chr2 126108575 126108648 -127147935 - L2 LINE L2 -1 3271 3199 495 192 17 50 chr2 126108913 126109033 -127147550 - L1MC5 LINE L1 -1131 6830 6715 601 197 72 64 chr2 126109126 126109375 -127147208 + L1MC5 LINE L1 6926 7176 -785 965 234 40 36 chr2 126109379 126109683 -127146900 + L1MC5 LINE L1 7603 7907 -54 299 263 43 6 chr2 126109729 126109862 -127146721 + L1MC/D LINE L1 5685 5821 -344 1496 182 39 39 chr2 126110249 126110376 -127146207 + AluJo SINE Alu 1 127 -185 234 91 0 0 chr2 126110376 126110409 -127146174 + (ATTG)n Simple_repeat Simple_repeat 4 36 0 1640 188 0 7 chr2 126110409 126110691 -127145892 - AluJb SINE Alu -32 280 1 1496 182 39 39 chr2 126110691 126110706 -127145877 + AluJo SINE Alu 126 140 -172 249 57 0 0 chr2 126110706 126110741 -127145842 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1496 182 39 39 chr2 126110741 126110903 -127145680 + AluJo SINE Alu 139 307 -5 2382 82 7 0 chr2 126110904 126111198 -127145385 + AluSc SINE Alu 1 296 -13 304 80 100 0 chr2 126111371 126111421 -127145162 - L1MB7 LINE L1 -25 6159 6105 921 167 46 0 chr2 126111797 126111971 -127144612 - L1MB7 LINE L1 -35 6149 5968 356 261 144 52 chr2 126112880 126113171 -127143412 - L1ME4a LINE L1 -77 6044 5727 2529 47 6 9 chr2 126113712 126114029 -127142554 - AluYb8 SINE Alu -2 316 1 1598 190 14 3 chr2 126114058 126114353 -127142230 + AluJb SINE Alu 1 298 -14 1338 174 87 0 chr2 126114355 126114597 -127141986 + AluSq SINE Alu 3 265 -48 322 320 0 33 chr2 126114653 126114775 -127141808 + C-rich Low_complexity Low_complexity 2 119 0 2313 90 0 7 chr2 126115183 126115482 -127141101 - AluY SINE Alu -14 297 1 1597 199 15 32 chr2 126115486 126115828 -127140755 - L1MB3 LINE L1 -144 6039 5704 363 211 0 0 chr2 126116081 126116242 -127140341 + (TG)n Simple_repeat Simple_repeat 1 161 0 201 74 0 0 chr2 126116241 126116268 -127140315 + (GA)n Simple_repeat Simple_repeat 1 27 0 * 204 135 0 0 chr2 126116267 126116304 -127140279 + (TG)n Simple_repeat Simple_repeat 1 37 0 762 143 0 8 chr2 126116898 126117017 -127139566 - Tigger1 DNA MER2_type -1 2417 2300 1752 177 3 23 chr2 126117018 126117188 -127139395 + AluJo SINE Alu 1 164 -148 3196 109 25 0 chr2 126117188 126117637 -127138946 + LTR46 LTR ERV1 1 460 0 1752 177 3 23 chr2 126117637 126117776 -127138807 + AluJo SINE Alu 164 304 -8 302 312 119 0 chr2 126117914 126118023 -127138560 + LTR33 LTR ERVL 25 146 -375 548 325 71 12 chr2 126118058 126118313 -127138270 + LTR33 LTR ERVL 250 519 -2 249 250 86 21 chr2 126118594 126118734 -127137849 - L1ME4a LINE L1 -11 6110 5962 634 246 17 79 chr2 126118771 126118880 -127137703 - L1MB3 LINE L1 -385 5736 5622 2267 130 0 0 chr2 126118880 126119187 -127137396 - AluSx SINE Alu -5 307 1 634 246 17 79 chr2 126119187 126119211 -127137372 - L1MB3 LINE L1 -499 5622 5598 1788 177 38 35 chr2 126119211 126119584 -127136999 - MLT1A2 LTR MaLR 0 374 1 634 246 17 79 chr2 126119584 126119689 -127136894 - L1MB3 LINE L1 -523 5598 5512 2010 65 4 8 chr2 126119690 126119950 -127136633 + L1PA5 LINE L1 5896 6154 0 1461 189 24 21 chr2 126120090 126120381 -127136202 + AluJo SINE Alu 3 294 -18 335 70 0 0 chr2 126120852 126120895 -127135688 - L1PB2 LINE L1 -171 5980 5938 652 197 16 0 chr2 126121046 126121168 -127135415 - L1MC5 LINE L1 -875 7086 6963 25 0 0 0 chr2 126121227 126121252 -127135331 + AT_rich Low_complexity Low_complexity 1 25 0 4197 72 7 12 chr2 126121258 126121827 -127134756 - L1PB1 LINE L1 -1 6150 5585 2420 165 68 96 chr2 126121828 126122109 -127134474 - L1ME1 LINE L1 -6 6160 5873 832 148 0 15 chr2 126122109 126122244 -127134339 - FLAM_C SINE Alu 0 133 1 2420 165 68 96 chr2 126122244 126122579 -127134004 - L1ME1 LINE L1 -293 5873 5561 3325 132 34 6 chr2 126122668 126123200 -127133383 + L1MB2 LINE L1 5590 6136 -35 209 150 17 50 chr2 126123202 126123262 -127133321 + A-rich Low_complexity Low_complexity 5 62 0 464 232 110 26 chr2 126123262 126123417 -127133166 - L1ME3 LINE L1 -75 6087 5920 737 238 55 35 chr2 126123437 126123665 -127132918 - L1MC5 LINE L1 -986 6822 6600 195 42 0 0 chr2 126123665 126123689 -127132894 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1605 182 36 14 chr2 126123692 126123967 -127132616 - AluJo SINE Alu -31 281 1 2400 102 0 3 chr2 126123973 126124287 -127132296 - AluSq SINE Alu 0 313 1 737 238 55 35 chr2 126124287 126124385 -127132198 - L1MC5 LINE L1 -1213 6595 6516 854 179 0 0 chr2 126124529 126124669 -127131914 + FLAM_C SINE Alu 1 140 -3 251 339 0 0 chr2 126124989 126125051 -127131532 + MER119 DNA MER1_type 2 63 -520 976 95 0 0 chr2 126125845 126125971 -127130612 + FLAM_C SINE Alu 1 126 -7 194 0 39 0 chr2 126125974 126126000 -127130583 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2008 154 0 0 chr2 126126249 126126542 -127130041 - AluSx SINE Alu -18 294 2 234 273 0 0 chr2 126126630 126126685 -127129898 + (CATA)n Simple_repeat Simple_repeat 2 56 0 1348 197 52 0 chr2 126126685 126126934 -127129649 - MER82 DNA MER2_type 0 653 392 2189 107 3 17 chr2 126126952 126127115 -127129468 - AluSq SINE Alu -17 296 137 2242 114 0 7 chr2 126127115 126127423 -127129160 - AluSp SINE Alu -7 306 1 2189 107 3 17 chr2 126127423 126127559 -127129024 - AluSq SINE Alu -176 137 1 960 168 0 40 chr2 126127567 126127740 -127128843 - AluJo SINE Alu -24 288 123 2198 165 5 18 chr2 126127741 126128136 -127128447 - MER82 DNA MER2_type -263 390 1 272 295 116 17 chr2 126128166 126128339 -127128244 + L1ME LINE L1 5519 5708 -413 291 103 0 51 chr2 126128929 126129007 -127127576 + (TCCCC)n Simple_repeat Simple_repeat 4 77 0 353 67 0 0 chr2 126129392 126129437 -127127146 - MER82 DNA MER2_type -345 308 264 774 232 6 33 chr2 126129847 126130028 -127126555 - MER45A DNA AcHobo -2 176 1 292 119 34 0 chr2 126130268 126130327 -127126256 + CT-rich Low_complexity Low_complexity 1 61 0 283 269 39 0 chr2 126130328 126130406 -127126177 + MIR3 SINE MIR 107 187 -21 1848 171 0 29 chr2 126131426 126131736 -127124847 + AluJo SINE Alu 1 301 -11 2014 124 7 3 chr2 126131997 126132303 -127124280 - AluSx SINE Alu 0 307 1 791 133 7 22 chr2 126132325 126132460 -127124123 - AluJo SINE Alu -169 133 1 318 250 59 52 chr2 126132961 126133097 -127123486 + MLT1H LTR MaLR 90 226 -323 1684 182 30 3 chr2 126133116 126133413 -127123170 - AluJo SINE Alu -7 305 1 436 206 128 0 chr2 126133447 126133549 -127123034 + MLT1H1 LTR MaLR 439 553 -2 461 251 118 35 chr2 126134817 126135020 -127121563 - L2 LINE L2 0 3313 3094 2315 91 0 26 chr2 126135221 126135529 -127121054 + AluSq SINE Alu 1 300 -13 1806 203 30 0 chr2 126135801 126136165 -127120418 - MLT1B LTR MaLR -12 378 4 2114 108 22 0 chr2 126136681 126136994 -127119589 + AluSg SINE Alu 1 319 0 2159 112 0 10 chr2 126137008 126137303 -127119280 + AluSc SINE Alu 1 292 -17 337 281 111 77 chr2 126137310 126137698 -127118885 + MLT1J LTR MaLR 111 511 0 307 346 124 0 chr2 126138161 126138346 -127118237 - MIR SINE MIR -2 260 53 220 182 18 18 chr2 126138431 126138486 -127118097 + (TA)n Simple_repeat Simple_repeat 2 56 0 1795 124 0 4 chr2 126138845 126139087 -127117496 - AluSx SINE Alu -71 241 1 817 200 36 0 chr2 126139087 126139273 -127117310 + L1MB8 LINE L1 5045 5240 -906 295 163 0 0 chr2 126139273 126139316 -127117267 - 5S rRNA rRNA -78 43 1 1851 175 46 3 chr2 126139316 126139686 -127116897 + L1MB8 LINE L1 5229 5613 -571 1914 172 63 19 chr2 126139690 126140103 -127116480 + L1MB8 LINE L1 5748 6178 0 1019 216 57 90 chr2 126140347 126140410 -127116173 + L1MDa LINE L1 144 208 -6332 2185 40 4 18 chr2 126140410 126140685 -127115898 - L1PA7 LINE L1 -1 6153 5883 1019 216 57 90 chr2 126140685 126140954 -127115629 + L1MDa LINE L1 208 465 -6075 2475 184 118 29 chr2 126141110 126141824 -127114759 + L1MDa LINE L1 998 1774 -4766 405 102 0 0 chr2 126141837 126141896 -127114687 + Alu SINE Alu 2 60 -258 280 177 81 0 chr2 126141897 126141959 -127114624 + L1MDa LINE L1 1789 1855 -4685 2104 113 0 3 chr2 126142012 126142294 -127114289 - AluSq SINE Alu -12 301 21 306 339 49 13 chr2 126142455 126142679 -127113904 - L1M4 LINE L1 -1785 4361 4130 26 0 0 0 chr2 126142838 126142864 -127113719 + AT_rich Low_complexity Low_complexity 1 26 0 2268 186 39 5 chr2 126142989 126143398 -127113185 + MSTB1 LTR MaLR 10 432 0 276 177 25 13 chr2 126144214 126144293 -127112290 + CT-rich Low_complexity Low_complexity 4 83 0 705 212 120 11 chr2 126144443 126144627 -127111956 - MIR SINE MIR -14 248 45 274 313 40 13 chr2 126144833 126144983 -127111600 - MIR3 SINE MIR -54 154 1 201 295 21 32 chr2 126145511 126145606 -127110977 - MIR SINE MIR -1 261 168 1791 158 158 64 chr2 126145609 126145720 -127110863 + MLT1D LTR MaLR 7 106 -399 851 141 0 8 chr2 126145720 126145848 -127110735 - FLAM_C SINE Alu -5 128 2 1791 158 158 64 chr2 126145848 126146128 -127110455 + MLT1D LTR MaLR 106 448 -57 2922 7 0 0 chr2 126146128 126146436 -127110147 - AluYa5 SINE Alu -3 308 1 1791 158 158 64 chr2 126146436 126146493 -127110090 + MLT1D LTR MaLR 448 498 -7 422 252 122 7 chr2 126146499 126146638 -127109945 - MIR SINE MIR -98 164 10 241 200 18 0 chr2 126146639 126146694 -127109889 + MIR SINE MIR 82 137 -125 2187 122 0 0 chr2 126147030 126147325 -127109258 - AluSx SINE Alu -17 295 1 397 262 225 19 chr2 126147660 126147931 -127108652 - L1ME4a LINE L1 -2 6119 5793 2362 79 3 3 chr2 126148364 126148656 -127107927 - AluSq SINE Alu -21 292 1 916 200 195 71 chr2 126148831 126149315 -127107268 + MLT1F LTR MaLR 1 403 -6 628 219 151 79 chr2 126149870 126150148 -127106435 - L1MC4a LINE L1 -1894 5914 5617 463 37 0 0 chr2 126151604 126151658 -127104925 + THE1A LTR MaLR 1 54 -301 1475 109 0 5 chr2 126151758 126151959 -127104624 + AluSc SINE Alu 101 300 -9 268 326 82 0 chr2 126152276 126152411 -127104172 - MIR SINE MIR -58 204 59 186 118 0 0 chr2 126152411 126152445 -127104138 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 775 162 0 0 chr2 126152447 126152564 -127104019 - FLAM_C SINE Alu -16 117 1 562 163 10 0 chr2 126153033 126153131 -127103452 + L1MD2 LINE L1 6248 6346 -13 189 238 48 0 chr2 126153202 126153244 -127103339 - L2 LINE L2 -20 3252 3209 2107 137 7 0 chr2 126154233 126154532 -127102051 + AluSx SINE Alu 1 301 -11 225 271 86 0 chr2 126154549 126154619 -127101964 + L1ME4a LINE L1 5513 5588 -2220 258 27 0 0 chr2 126154705 126154742 -127101841 + AluY SINE Alu 260 296 -4 361 233 31 106 chr2 126154841 126154950 -127101633 + L1ME4a LINE L1 5733 5849 -272 2414 91 3 0 chr2 126154950 126155258 -127101325 + AluY SINE Alu 2 310 -1 361 233 31 106 chr2 126155258 126155348 -127101235 + L1ME4a LINE L1 5849 5906 -215 2316 104 0 13 chr2 126155348 126155665 -127100918 + AluSq SINE Alu 1 313 0 361 233 31 106 chr2 126155665 126155756 -127100827 + L1ME4a LINE L1 5906 6002 -119 2087 121 10 3 chr2 126155761 126156058 -127100525 - AluSx SINE Alu -13 299 1 402 21 0 0 chr2 126156220 126156267 -127100316 + (CA)n Simple_repeat Simple_repeat 2 48 0 2263 105 14 0 chr2 126156420 126156714 -127099869 + AluSq SINE Alu 1 298 -15 1869 143 16 46 chr2 126156716 126156852 -127099731 + AluJb SINE Alu 1 139 -173 2174 112 0 0 chr2 126156852 126157174 -127099409 + AluSx SINE Alu 1 322 0 1869 143 16 46 chr2 126157174 126157342 -127099241 + AluJb SINE Alu 139 298 -14 756 243 80 75 chr2 126157390 126157703 -127098880 + L1MC4a LINE L1 5574 5891 -1917 2231 123 3 0 chr2 126157703 126158004 -127098579 + AluSp SINE Alu 2 303 -10 756 243 80 75 chr2 126158004 126158052 -127098531 + L1MC4a LINE L1 5891 5937 -1871 264 122 0 0 chr2 126158053 126158094 -127098489 + (TG)n Simple_repeat Simple_repeat 1 41 0 21 0 0 0 chr2 126158095 126158116 -127098467 + AT_rich Low_complexity Low_complexity 1 21 0 2346 62 31 3 chr2 126158812 126159101 -127097482 + AluY SINE Alu 1 297 -14 782 201 0 46 chr2 126160143 126160317 -127096266 + FRAM SINE Alu 1 166 0 754 192 0 0 chr2 126161008 126161138 -127095445 + FLAM_C SINE Alu 2 131 -12 1999 135 3 0 chr2 126161144 126161464 -127095119 + AluSg SINE Alu 1 321 0 2151 101 0 3 chr2 126161474 126161760 -127094823 + AluSq SINE Alu 6 290 -23 30 0 0 0 chr2 126161764 126161794 -127094789 + AT_rich Low_complexity Low_complexity 1 30 0 2730 166 8 64 chr2 126162456 126162692 -127093891 + L1ME4a LINE L1 4901 5149 -1025 2007 146 0 14 chr2 126162692 126162987 -127093596 + AluSx SINE Alu 6 296 -16 2730 166 8 64 chr2 126162987 126163745 -127092838 + L1ME4a LINE L1 5149 5824 -350 21 0 0 0 chr2 126163751 126163772 -127092811 + AT_rich Low_complexity Low_complexity 1 21 0 208 167 0 71 chr2 126164103 126164187 -127092396 + GA-rich Low_complexity Low_complexity 1 78 0 368 299 8 0 chr2 126164202 126164319 -127092264 + GA-rich Low_complexity Low_complexity 2 119 0 23 0 0 0 chr2 126165331 126165354 -127091229 + AT_rich Low_complexity Low_complexity 1 23 0 926 255 56 81 chr2 126165527 126165924 -127090659 - MLT1H LTR MaLR -40 509 80 2291 122 0 0 chr2 126165924 126166235 -127090348 + AluSx SINE Alu 1 311 -1 926 255 56 81 chr2 126166235 126166313 -127090270 - MLT1H LTR MaLR -469 80 2 2270 96 3 3 chr2 126166768 126167069 -127089514 + AluSx SINE Alu 1 301 -11 252 227 30 15 chr2 126167146 126167212 -127089371 - MIR SINE MIR -92 170 104 1936 147 39 0 chr2 126167225 126167511 -127089072 + AluSg SINE Alu 1 297 -13 279 302 21 10 chr2 126167554 126167650 -127088933 - MIR SINE MIR -161 101 5 2418 79 3 3 chr2 126167875 126168178 -127088405 + AluSq SINE Alu 1 303 -10 714 301 136 14 chr2 126169019 126169607 -127086976 + L2 LINE L2 1626 2285 -1029 515 327 93 46 chr2 126169587 126169975 -127086608 + L2 LINE L2 2866 3271 -1 * 324 226 45 53 chr2 126170928 126171061 -127085522 + L1ME4a LINE L1 5990 6121 0 344 230 40 20 chr2 126171544 126171644 -127084939 + L1MC5 LINE L1 7808 7909 -52 2000 134 13 7 chr2 126171650 126171948 -127084635 + AluSx SINE Alu 1 300 -12 4890 206 59 27 chr2 126172012 126172069 -127084514 - L1M4 LINE L1 -728 5450 5396 2067 122 7 0 chr2 126172069 126172355 -127084228 - AluSc SINE Alu -21 288 1 4890 206 59 27 chr2 126172355 126172653 -127083930 - L1M4 LINE L1 -782 5396 5109 1665 171 37 13 chr2 126172653 126172952 -127083631 + AluJb SINE Alu 1 306 -6 4890 206 59 27 chr2 126172952 126173008 -127083575 - L1M4 LINE L1 -1069 5109 5056 857 135 8 15 chr2 126173008 126173141 -127083442 - FLAM_C SINE Alu -1 132 1 4890 206 59 27 chr2 126173141 126173545 -127083038 - L1M4 LINE L1 -1122 5056 4666 2102 124 23 10 chr2 126173545 126173851 -127082732 - AluSx SINE Alu -2 310 1 4890 206 59 27 chr2 126173851 126173996 -127082587 - L1M4 LINE L1 -1512 4666 4527 1994 145 10 0 chr2 126173996 126174292 -127082291 + AluJb SINE Alu 1 299 -13 4890 206 59 27 chr2 126174292 126174619 -127081964 - L1M4 LINE L1 -1651 4527 4111 910 142 0 0 chr2 126174649 126174776 -127081807 + AluJb SINE Alu 1 127 -185 29 0 0 0 chr2 126174778 126174807 -127081776 + AT_rich Low_complexity Low_complexity 1 29 0 3113 216 40 126 chr2 126174814 126175446 -127081137 - L1M4 LINE L1 -2061 4085 3400 721 184 0 0 chr2 126175446 126175571 -127081012 + AluSg/x SINE Alu 172 296 -14 3113 216 40 126 chr2 126175571 126176109 -127080474 - L1M4 LINE L1 -2746 3400 2817 2159 111 3 25 chr2 126176109 126176424 -127080159 - AluSx SINE Alu -4 308 1 3113 216 40 126 chr2 126176424 126176448 -127080135 - L1M4 LINE L1 -3329 2817 2793 578 123 53 35 chr2 126176448 126176562 -127080021 - L1MB3 LINE L1 0 6183 6068 3113 216 40 126 chr2 126176562 126176870 -127079713 - L1M4 LINE L1 -3353 2793 2641 1539 92 0 0 chr2 126177135 126177330 -127079253 - AluSg/x SINE Alu -5 305 111 2189 70 3 23 chr2 126177771 126178070 -127078513 + AluSp SINE Alu 5 297 -16 1855 227 100 19 chr2 126178071 126178135 -127078448 + L1ME1 LINE L1 5603 5660 -674 2806 22 6 0 chr2 126178135 126178448 -127078135 + AluYb8 SINE Alu 1 315 -3 1855 227 100 19 chr2 126178448 126178913 -127077670 + L1ME1 LINE L1 5660 6333 -1 2261 66 3 18 chr2 126178919 126179246 -127077337 + AluY SINE Alu 1 323 0 1903 130 25 0 chr2 126179246 126179555 -127077028 + AluSx SINE Alu 1 316 0 226 260 27 14 chr2 126179718 126179791 -127076792 + MER5B DNA MER1_type 3 76 -102 201 347 20 73 chr2 126179939 126180089 -127076494 + L2 LINE L2 3044 3185 -87 375 167 28 0 chr2 126180355 126180427 -127076156 - U13 snRNA snRNA -2 102 29 1772 197 190 0 chr2 126180615 126181051 -127075532 + L1ME1 LINE L1 5420 5938 -228 1279 109 0 6 chr2 126181052 126181226 -127075357 + AluSg/x SINE Alu 134 306 -6 905 199 17 0 chr2 126181229 126181405 -127075178 + L1ME1 LINE L1 5931 6109 -57 2058 120 17 3 chr2 126181407 126181698 -127074885 + AluSx SINE Alu 3 297 -15 198 143 0 0 chr2 126182534 126182569 -127074014 + (T)n Simple_repeat Simple_repeat 1 35 0 204 122 0 0 chr2 126183123 126183164 -127073419 + (CAT)n Simple_repeat Simple_repeat 1 41 0 2322 112 3 0 chr2 126183537 126183842 -127072741 - AluSp SINE Alu -7 306 1 752 175 56 0 chr2 126183850 126183976 -127072607 - FLAM_A SINE Alu 0 133 1 1074 281 80 9 chr2 126184030 126184368 -127072215 - MLT1K LTR MaLR -17 571 210 435 181 9 38 chr2 126185601 126185706 -127070877 - HsTC2 DNA Tc2 -1 1897 1796 2184 90 42 14 chr2 126185766 126186054 -127070529 + AluSx SINE Alu 1 296 -16 2216 97 3 13 chr2 126186420 126186730 -127069853 - AluY SINE Alu -4 307 1 2006 110 27 13 chr2 126187107 126187408 -127069175 + AluSx SINE Alu 1 305 -7 1650 249 201 21 chr2 126187471 126188001 -127068582 + L2 LINE L2 1907 2340 -974 1915 130 34 10 chr2 126188001 126188294 -127068289 - AluJo SINE Alu -12 300 1 1650 249 201 21 chr2 126188294 126188613 -127067970 + L2 LINE L2 2340 2909 -405 916 172 7 0 chr2 126188615 126188766 -127067817 + FRAM SINE Alu 17 168 -8 904 191 105 67 chr2 126188782 126189013 -127067570 + L2 LINE L2 2925 3177 -136 2164 128 0 6 chr2 126189013 126189325 -127067258 - AluSx SINE Alu -2 310 1 904 191 105 67 chr2 126189325 126189464 -127067119 + L2 LINE L2 3177 3309 -4 2132 121 3 0 chr2 126189897 126190194 -127066389 + AluSp SINE Alu 3 300 -13 1958 119 25 0 chr2 126191121 126191452 -127065131 - AluSx SINE Alu 0 338 1 23 0 0 0 chr2 126191514 126191537 -127065046 + AT_rich Low_complexity Low_complexity 1 23 0 1590 186 7 0 chr2 126191540 126191671 -127064912 + AluJo SINE Alu 1 130 -182 2089 103 20 27 chr2 126191671 126191972 -127064611 + AluSq SINE Alu 1 299 -14 1590 186 7 0 chr2 126191972 126192120 -127064463 + AluJo SINE Alu 130 282 -30 186 71 0 0 chr2 126192123 126192151 -127064432 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 731 159 0 9 chr2 126192165 126192278 -127064305 + FLAM_C SINE Alu 9 120 -23 198 0 0 0 chr2 126192280 126192302 -127064281 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 2132 94 7 0 chr2 126192552 126192828 -127063755 + AluSq SINE Alu 1 278 -35 2273 109 0 0 chr2 126192828 126193122 -127063461 + AluSx SINE Alu 1 294 -18 244 283 0 0 chr2 126193209 126193269 -127063314 - FRAM/FAM SINE Alu -111 55 1 2144 128 7 0 chr2 126193479 126193785 -127062798 + AluSx SINE Alu 1 308 -4 611 209 0 44 chr2 126193816 126193974 -127062609 - FRAM SINE Alu -9 167 17 260 180 0 0 chr2 126194096 126194146 -127062437 + MIR SINE MIR 92 141 -121 2226 102 0 10 chr2 126194209 126194512 -127062071 - AluSg SINE Alu -10 300 1 1139 126 13 0 chr2 126194628 126194787 -127061796 - AluSg/x SINE Alu -16 296 136 2222 115 0 0 chr2 126194789 126195085 -127061498 - AluSp SINE Alu -13 300 5 2116 133 0 10 chr2 126195180 126195480 -127061103 - AluSx SINE Alu -15 297 1 2321 106 3 6 chr2 126195483 126195794 -127060789 - AluSp SINE Alu -2 311 2 267 122 49 0 chr2 126195809 126195850 -127060733 - MER57A LTR ERV1 -66 337 295 922 138 36 10 chr2 126195859 126196055 -127060528 - L1M4 LINE L1 -981 5165 4965 360 0 0 0 chr2 126196092 126196132 -127060451 + (TA)n Simple_repeat Simple_repeat 2 41 0 2199 82 11 0 chr2 126196133 126196412 -127060171 - AluSx SINE Alu -30 282 1 4706 211 67 28 chr2 126196415 126197384 -127059199 - Cheshire DNA MER1_type -400 2020 998 455 272 18 26 chr2 126197384 126197498 -127059085 + MER81 DNA DNA 2 114 0 4706 211 67 28 chr2 126197498 126197676 -127058907 - Cheshire DNA MER1_type -1422 998 828 1409 195 42 0 chr2 126197676 126197967 -127058616 + AluJb SINE Alu 11 312 0 695 155 70 0 chr2 126197967 126198096 -127058487 - Cheshire DNA MER1_type -1584 836 699 1426 147 6 108 chr2 126198125 126198458 -127058125 - AluSp SINE Alu -14 299 1 2270 112 0 3 chr2 126198460 126198772 -127057811 - AluY SINE Alu 0 311 1 1022 104 0 8 chr2 126198776 126198910 -127057673 - AluSq/x SINE Alu -180 133 1 274 200 62 50 chr2 126198910 126198990 -127057593 - Cheshire DNA MER1_type -1758 662 582 * 678 250 91 0 chr2 126198983 126199159 -127057424 - Cheshire DNA MER1_type -2094 326 135 736 167 8 15 chr2 126199568 126199700 -127056883 + FLAM_C SINE Alu 6 136 -7 2043 123 10 7 chr2 126199790 126200083 -127056500 + AluSx SINE Alu 1 294 -18 181 260 40 0 chr2 126200286 126200336 -127056247 - L2 LINE L2 -6 3307 3256 1634 96 5 0 chr2 126200493 126200711 -127055872 - AluSp SINE Alu -10 303 85 1639 172 3 28 chr2 126200740 126200902 -127055681 - AluJo SINE Alu -18 294 141 2304 98 3 0 chr2 126200902 126201197 -127055386 - AluSc SINE Alu -13 296 1 1639 172 3 28 chr2 126201197 126201324 -127055259 - AluJo SINE Alu -171 141 12 21 57 0 0 chr2 126202063 126202098 -127054485 + AT_rich Low_complexity Low_complexity 1 35 0 2297 89 0 25 chr2 126203463 126203777 -127052806 + AluSg SINE Alu 1 306 -4 897 215 0 0 chr2 126203953 126204116 -127052467 - FRAM SINE Alu -17 159 1 2088 121 0 17 chr2 126204314 126204603 -127051980 + AluSx SINE Alu 1 313 0 262 0 0 0 chr2 126204603 126204632 -127051951 + (CAAAA)n Simple_repeat Simple_repeat 2 70 0 2273 65 7 0 chr2 126204638 126204930 -127051653 + AluSp SINE Alu 5 298 -15 1640 125 4 4 chr2 126204946 126205186 -127051397 + AluSx SINE Alu 1 240 -72 258 159 0 19 chr2 126205564 126205616 -127050967 + AluSg SINE Alu 1 35 -264 330 269 31 88 chr2 126206085 126206278 -127050305 + L2 LINE L2 2935 3116 -156 194 344 86 33 chr2 126206920 126207071 -127049512 + MIR3 SINE MIR 34 192 -16 938 93 23 0 chr2 126207085 126207214 -127049369 + AluSq/x SINE Alu 1 132 -180 1847 116 0 4 chr2 126207218 126207477 -127049106 + AluSg SINE Alu 35 292 -18 1877 112 0 21 chr2 126207480 126207616 -127048967 + AluSx SINE Alu 1 138 -174 2085 131 0 0 chr2 126207616 126207913 -127048670 + AluSx SINE Alu 1 297 -15 1877 112 0 21 chr2 126207913 126208062 -127048521 + AluSx SINE Alu 138 280 -32 224 29 0 29 chr2 126208064 126208098 -127048485 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 362 244 34 50 chr2 126208101 126208220 -127048363 - MER112 DNA MER1_type -96 164 48 1515 130 0 47 chr2 126208385 126208639 -127047944 + AluSq SINE Alu 1 242 -71 21 0 0 0 chr2 126208783 126208804 -127047779 + AT_rich Low_complexity Low_complexity 1 21 0 236 191 15 29 chr2 126208806 126208874 -127047709 + (TA)n Simple_repeat Simple_repeat 1 67 0 2041 95 0 10 chr2 126208894 126209190 -127047393 + AluSg SINE Alu 1 293 -17 445 308 156 5 chr2 126209461 126209685 -127046898 - MIR SINE MIR 0 262 5 188 75 0 75 chr2 126211321 126211361 -127045222 + (CGAGG)n Simple_repeat Simple_repeat 4 40 0 214 242 33 66 chr2 126211418 126211600 -127044983 + (CGGGG)n Simple_repeat Simple_repeat 4 179 0 * 285 306 0 32 chr2 126211468 126211654 -127044929 + G-rich Low_complexity Low_complexity 1 180 0 2075 50 6 99 chr2 126211822 126212144 -127044439 - AluSq SINE Alu -21 292 1 2231 91 0 13 chr2 126212578 126212886 -127043697 - AluSx SINE Alu -8 304 1 312 27 0 0 chr2 126214018 126214055 -127042528 + (TG)n Simple_repeat Simple_repeat 1 37 0 384 206 93 21 chr2 126214281 126214378 -127042205 - MER5A DNA MER1_type -76 113 10 521 232 41 61 chr2 126214432 126214550 -127042033 + MLT1C LTR MaLR 11 130 -375 2208 104 3 0 chr2 126214550 126214849 -127041734 + AluSx SINE Alu 1 300 -12 521 232 41 61 chr2 126214849 126215064 -127041519 + MLT1C LTR MaLR 130 497 -8 260 151 0 19 chr2 126215200 126215253 -127041330 + CT-rich Low_complexity Low_complexity 4 55 0 238 258 47 0 chr2 126215318 126215403 -127041180 - MER20B DNA MER1_type -21 198 106 1736 169 37 11 chr2 126215813 126216162 -127040421 - MLT1A1 LTR MaLR -2 363 6 281 273 101 7 chr2 126216972 126217111 -127039472 + L1ME LINE L1 5639 5790 -331 22 0 0 0 chr2 126217145 126217167 -127039416 + AT_rich Low_complexity Low_complexity 1 22 0 1523 215 19 3 chr2 126217167 126217479 -127039104 + L1PB4 LINE L1 5801 6117 -39 724 229 11 21 chr2 126217590 126217778 -127038805 - AluJb SINE Alu -7 305 120 22 0 0 0 chr2 126217778 126217800 -127038783 + AT_rich Low_complexity Low_complexity 1 22 0 242 49 0 49 chr2 126218033 126218074 -127038509 + (TTTCC)n Simple_repeat Simple_repeat 5 43 0 1292 112 0 0 chr2 126218074 126218261 -127038322 - AluSq SINE Alu 0 313 127 278 264 38 63 chr2 126218438 126218597 -127037986 + L1M4 LINE L1 3521 3675 -2471 6769 70 59 0 chr2 126218676 126220118 -127036465 - L1PA7 LINE L1 0 6154 4672 1021 117 0 0 chr2 126220118 126220263 -127036320 - AluSq SINE Alu -168 145 1 266 300 100 0 chr2 126220591 126220721 -127035862 + MER20B DNA MER1_type 15 157 -626 242 0 0 0 chr2 126221027 126221055 -127035528 + MLT1J2 LTR MaLR 396 423 -27 1712 150 11 14 chr2 126221342 126221473 -127035110 + AluJb SINE Alu 6 136 -176 2141 114 0 0 chr2 126221473 126221771 -127034812 + AluSq SINE Alu 1 298 -15 1712 150 11 14 chr2 126221771 126221926 -127034657 + AluJb SINE Alu 136 291 -21 7795 186 70 38 chr2 126221929 126222574 -127034009 + L1MDa LINE L1 284 907 -5633 2041 156 16 38 chr2 126222574 126222945 -127033638 + MLT1A1 LTR MaLR 1 363 -2 7795 186 70 38 chr2 126222945 126223391 -127033192 + L1MDa LINE L1 907 1337 -5203 1871 156 7 0 chr2 126223391 126223692 -127032891 + AluJb SINE Alu 1 303 -9 7795 186 70 38 chr2 126223692 126224395 -127032188 + L1MDa LINE L1 1337 2016 -4524 369 43 0 0 chr2 126224395 126224442 -127032141 + (CA)n Simple_repeat Simple_repeat 2 48 0 7795 186 70 38 chr2 126224442 126225002 -127031581 + L1MDa LINE L1 2016 2928 -3612 2262 95 0 0 chr2 126225002 126225297 -127031286 + AluSc SINE Alu 1 295 -14 7795 186 70 38 chr2 126225297 126225344 -127031239 + L1MDa LINE L1 2928 2972 -3568 1668 192 0 7 chr2 126225344 126225651 -127030932 + AluJo SINE Alu 1 305 -7 1661 178 0 13 chr2 126225651 126225982 -127030601 + AluJo SINE Alu 1 327 0 984 237 33 8 chr2 126225983 126226228 -127030355 + L1M4 LINE L1 4018 4268 -1878 * 1834 231 119 25 chr2 126226209 126226730 -127029853 + L1MDa LINE L1 2959 3430 -3110 2436 63 0 0 chr2 126226730 126227033 -127029550 + AluY SINE Alu 1 303 -8 1834 231 119 25 chr2 126227033 126227063 -127029520 + L1MDa LINE L1 3430 3456 -3084 2021 117 14 0 chr2 126227063 126227353 -127029230 + AluSx SINE Alu 4 297 -15 1834 231 119 25 chr2 126227353 126227609 -127028974 + L1MDa LINE L1 3456 3843 -2697 791 128 0 8 chr2 126227617 126227734 -127028849 + AluJo SINE Alu 87 202 -110 364 282 51 51 chr2 126227755 126227971 -127028612 + L1MDa LINE L1 3829 4044 -2496 1719 161 3 14 chr2 126228034 126228326 -127028257 - AluJb SINE Alu -23 289 1 236 140 0 40 chr2 126228327 126228377 -127028206 - MER34 LTR ERV1 -48 494 447 692 191 61 0 chr2 126228525 126228656 -127027927 + FLAM_C SINE Alu 3 141 -2 2153 83 21 0 chr2 126228824 126229113 -127027470 - AluSg SINE Alu -15 295 1 211 250 59 0 chr2 126229186 126229254 -127027329 + MIR SINE MIR 178 249 -13 254 280 80 57 chr2 126230567 126230742 -127025841 + L2 LINE L2 2729 2907 -407 335 244 176 8 chr2 126230880 126230999 -127025584 + L2 LINE L2 3134 3272 0 2193 90 3 13 chr2 126231003 126231315 -127025268 + AluSx SINE Alu 1 309 -3 181 253 116 63 chr2 126231425 126231520 -127025063 - MIR SINE MIR -111 151 52 311 89 22 0 chr2 126231947 126231992 -127024591 - MER75 DNA T2_type 0 504 459 2131 95 0 29 chr2 126232030 126232345 -127024238 - AluSq SINE Alu -7 306 1 271 191 0 44 chr2 126232395 126232463 -127024120 + MER4-int LTR ERV1 1112 1176 -5422 302 207 270 0 chr2 126233299 126233410 -127023173 + L1ME4a LINE L1 5978 6118 -3 488 180 33 80 chr2 126233631 126233706 -127022877 - MER104 DNA Tc2 -1745 153 87 2054 119 3 0 chr2 126233706 126234001 -127022582 + AluSx SINE Alu 1 296 -16 488 180 33 80 chr2 126234001 126234075 -127022508 - MER104 DNA Tc2 -1811 87 11 633 214 62 0 chr2 126234235 126234380 -127022203 + MER58C DNA MER1_type 62 215 0 2174 115 13 107 chr2 126234388 126234762 -127021821 + MER1B DNA MER1_type 1 339 0 275 242 30 106 chr2 126234833 126234965 -127021618 + Charlie8 DNA MER1_type 3 124 -2293 2077 113 3 3 chr2 126235240 126235549 -127021034 - AluSx SINE Alu -2 310 2 982 189 22 0 chr2 126236021 126236206 -127020377 + MER2 DNA MER2_type 2 190 -155 2172 75 14 20 chr2 126236206 126236364 -127020219 - AluSg SINE Alu -17 293 136 2182 117 3 0 chr2 126236364 126236671 -127019912 - AluSp SINE Alu -5 308 1 2172 75 14 20 chr2 126236671 126236807 -127019776 - AluSg SINE Alu -174 136 1 675 256 75 4 chr2 126236928 126237155 -127019428 - L1MC4 LINE L1 -5 8037 7795 2500 49 0 10 chr2 126237517 126237824 -127018759 - AluY SINE Alu -7 304 1 456 191 40 135 chr2 126238153 126238279 -127018304 + MER58B DNA MER1_type 102 341 0 523 234 92 14 chr2 126238350 126238491 -127018092 - MLT1J LTR MaLR -195 316 165 695 185 0 15 chr2 126238702 126238837 -127017746 + FLAM_C SINE Alu 1 133 0 29 0 0 0 chr2 126238918 126238947 -127017636 + AT_rich Low_complexity Low_complexity 1 29 0 893 114 8 0 chr2 126240701 126240833 -127015750 + FLAM_C SINE Alu 1 133 -10 23 0 0 0 chr2 126242305 126242328 -127014255 + AT_rich Low_complexity Low_complexity 1 23 0 182 297 112 70 chr2 126242475 126242734 -127013849 - L2 LINE L2 -824 2490 2221 633 270 111 0 chr2 126242903 126243092 -127013491 - MLT1I LTR MaLR -3 406 197 1751 150 6 22 chr2 126243140 126243454 -127013129 - AluJb SINE Alu -3 309 1 509 289 71 24 chr2 126243734 126243945 -127012638 - MIR SINE MIR -6 256 36 2268 173 118 44 chr2 126244226 126244574 -127012009 - L1MB8 LINE L1 -1 6177 5856 1953 85 0 75 chr2 126244574 126244880 -127011703 - AluSx SINE Alu -16 296 14 2268 173 118 44 chr2 126244880 126245143 -127011440 - L1MB8 LINE L1 -322 5856 5521 1344 7 0 0 chr2 126245304 126245452 -127011131 - L1PA5 LINE L1 -8 6146 5999 2114 101 7 0 chr2 126245455 126245742 -127010841 - AluSx SINE Alu -15 297 9 2338 74 0 0 chr2 126247202 126247499 -127009084 - AluSx SINE Alu -15 297 1 1647 134 95 32 chr2 126248177 126248461 -127008122 + AluJb SINE Alu 1 302 0 1996 175 24 16 chr2 126248771 126248924 -127007659 - MER57A LTR ERV1 0 403 253 1401 94 169 15 chr2 126248924 126249061 -127007522 + AluSg1 SINE Alu 1 116 -193 2085 111 30 0 chr2 126249061 126249359 -127007224 + AluSg SINE Alu 1 307 -3 2258 104 0 0 chr2 126249366 126249674 -127006909 + AluSx SINE Alu 1 308 -4 1401 94 169 15 chr2 126249674 126249794 -127006789 + AluSg1 SINE Alu 121 307 -2 1996 175 24 16 chr2 126249794 126250023 -127006560 - MER57A LTR ERV1 -150 253 18 246 200 0 0 chr2 126250307 126250347 -127006236 + Alu SINE Alu 199 238 -61 258 159 0 19 chr2 126250725 126250777 -127005806 + AluSg SINE Alu 1 35 -267 330 269 31 88 chr2 126251246 126251439 -127005144 + L2 LINE L2 2935 3116 -156 198 344 86 33 chr2 126252081 126252232 -127004351 + MIR3 SINE MIR 34 192 -16 938 93 23 0 chr2 126252246 126252375 -127004208 + AluSq/x SINE Alu 1 132 -180 1847 116 0 4 chr2 126252379 126252638 -127003945 + AluSg SINE Alu 35 292 -18 1877 112 0 21 chr2 126252641 126252777 -127003806 + AluSx SINE Alu 1 138 -174 2085 131 0 0 chr2 126252777 126253074 -127003509 + AluSx SINE Alu 1 297 -15 1877 112 0 21 chr2 126253074 126253223 -127003360 + AluSx SINE Alu 138 280 -32 224 29 0 29 chr2 126253225 126253259 -127003324 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 362 244 34 50 chr2 126253262 126253381 -127003202 - MER112 DNA MER1_type -96 164 48 1515 130 0 47 chr2 126253546 126253800 -127002783 + AluSq SINE Alu 1 242 -71 21 0 0 0 chr2 126253944 126253965 -127002618 + AT_rich Low_complexity Low_complexity 1 21 0 236 191 15 29 chr2 126253967 126254035 -127002548 + (TA)n Simple_repeat Simple_repeat 1 67 0 2041 95 0 10 chr2 126254055 126254351 -127002232 + AluSg SINE Alu 1 293 -17 445 308 156 5 chr2 126254622 126254846 -127001737 - MIR SINE MIR 0 262 5 188 75 0 75 chr2 126256481 126256521 -127000062 + (CGAGG)n Simple_repeat Simple_repeat 4 40 0 273 291 0 17 chr2 126256691 126256808 -126999775 + G-rich Low_complexity Low_complexity 6 120 0 2075 50 6 99 chr2 126256976 126257298 -126999285 - AluSq SINE Alu -21 292 1 2196 91 0 16 chr2 126257732 126258041 -126998542 - AluSx SINE Alu -8 304 1 312 27 0 0 chr2 126259173 126259210 -126997373 + (TG)n Simple_repeat Simple_repeat 1 37 0 384 206 93 21 chr2 126259436 126259533 -126997050 - MER5A DNA MER1_type -76 113 10 379 178 51 76 chr2 126259587 126259705 -126996878 + MLT1B LTR MaLR 11 125 -265 2347 92 3 0 chr2 126259705 126260011 -126996572 + AluSx SINE Alu 1 307 -5 204 325 175 0 chr2 126260012 126260092 -126996491 - L2 LINE L2 -621 2693 2600 5304 70 11 31 chr2 126260338 126260505 -126996078 - LTR8 LTR ERV1 0 691 522 2516 41 0 0 chr2 126260505 126260800 -126995783 - AluY SINE Alu -15 296 2 5304 70 11 31 chr2 126260800 126261337 -126995246 - LTR8 LTR ERV1 -169 522 1 2044 86 0 38 chr2 126261577 126261905 -126994678 - AluSg SINE Alu 0 317 1 221 290 86 21 chr2 126263367 126263460 -126993123 + L2 LINE L2 2349 2447 -867 2596 129 2 17 chr2 126263514 126263540 -126993043 - L1MB3 LINE L1 -10 6173 6148 1612 153 0 62 chr2 126263540 126263751 -126992832 - AluJb SINE Alu -23 289 67 180 0 0 0 chr2 126263751 126263771 -126992812 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 2021 114 0 0 chr2 126263771 126264052 -126992531 - AluSx SINE Alu -29 283 3 1612 153 0 62 chr2 126264052 126264147 -126992436 - AluJb SINE Alu -243 69 1 2596 129 2 17 chr2 126264147 126264540 -126992043 - L1MB3 LINE L1 -35 6148 5760 2252 88 3 0 chr2 126264548 126264843 -126991740 - AluSx SINE Alu -16 296 1 2001 86 8 0 chr2 126264854 126265122 -126991461 - AluSp SINE Alu -18 295 26 188 297 207 9 chr2 126265899 126266010 -126990573 + MIR SINE MIR 99 231 -31 263 167 133 0 chr2 126266616 126266676 -126989907 - L2 LINE L2 -6 3307 3240 2083 108 0 0 chr2 126266824 126267103 -126989480 - AluSg SINE Alu -31 279 1 346 277 58 22 chr2 126267180 126267317 -126989266 - HAL1 LINE L1 -2362 145 4 394 271 69 12 chr2 126267377 126267552 -126989031 - L1ME4a LINE L1 -5 6702 5935 499 130 209 61 chr2 126268292 126268407 -126988176 - FLAM_C SINE Alu 0 133 2 398 297 92 0 chr2 126268407 126268592 -126987991 + L1ME LINE L1 5566 5767 -354 1925 99 0 72 chr2 126268730 126269067 -126987516 + AluSx SINE Alu 1 315 0 1953 89 38 21 chr2 126269122 126269413 -126987170 + AluSx SINE Alu 1 296 -16 1169 121 0 0 chr2 126269413 126269579 -126987004 + AluSg/x SINE Alu 132 297 -13 491 232 0 0 chr2 126269991 126270090 -126986493 + FLAM_A SINE Alu 18 116 -26 2572 103 15 118 chr2 126270913 126270967 -126985616 + MSTB LTR MaLR 1 59 -367 4063 70 13 7 chr2 126270967 126271021 -126985562 + L1PA8 LINE L1 5630 5682 -490 2104 112 0 3 chr2 126271021 126271317 -126985266 + AluSg SINE Alu 1 295 -15 4063 70 13 7 chr2 126271317 126271802 -126984781 + L1PA8 LINE L1 5682 6172 0 2572 103 15 118 chr2 126271802 126272222 -126984361 + MSTB LTR MaLR 59 426 0 328 350 71 71 chr2 126272378 126272701 -126983882 + L2 LINE L2 2950 3272 0 477 266 173 65 chr2 126272828 126272924 -126983659 - L2 LINE L2 -1 3312 3228 1906 140 0 7 chr2 126272924 126273217 -126983366 - AluSx SINE Alu -18 294 4 477 266 173 65 chr2 126273217 126273398 -126983185 - L2 LINE L2 -85 3228 3005 2066 113 0 22 chr2 126273467 126273785 -126982798 - AluSx SINE Alu -1 311 1 2073 107 17 0 chr2 126273883 126274182 -126982401 - AluSx SINE Alu -8 304 1 1644 210 40 58 chr2 126274200 126274600 -126981983 + HERV3 LTR ERV1 2081 2473 -3858 1156 161 185 50 chr2 126274631 126274711 -126981872 - MER61D LTR ERV1 0 501 433 1890 141 3 7 chr2 126274711 126275010 -126981573 + AluSx SINE Alu 2 299 -13 1156 161 185 50 chr2 126275010 126275189 -126981394 - MER61D LTR ERV1 -68 433 207 1717 218 39 51 chr2 126275263 126275676 -126980907 + LTR2 LTR ERV1 42 449 0 3792 161 38 56 chr2 126275676 126277106 -126979477 + Harlequin LTR ERV1 1 1481 -6945 1945 127 108 91 chr2 126277077 126277495 -126979088 + HERV3 LTR ERV1 3930 4354 -3459 * 1689 238 65 6 chr2 126277477 126277817 -126978766 + HERV3 LTR ERV1 1721 2080 -6346 * 855 303 18 9 chr2 126277981 126278209 -126978374 + HERV3 LTR ERV1 2077 2306 -6120 716 99 0 0 chr2 126278209 126278300 -126978283 - MER61D LTR ERV1 -297 204 114 1621 149 46 4 chr2 126278415 126278696 -126977887 + AluJb SINE Alu 1 293 -19 540 113 0 52 chr2 126278696 126278782 -126977801 - FLAM SINE Alu -188 124 42 2840 156 62 19 chr2 126278782 126279314 -126977269 + LTR10A LTR ERV1 1 555 -54 1632 239 92 97 chr2 126279324 126280160 -126976423 + LTR10A-int LTR ERV1 1 832 -5817 1064 119 160 5 chr2 126280130 126280415 -126976168 + LTR10A-int LTR ERV1 751 2694 -3955 * 799 260 0 6 chr2 126280406 126280587 -126975996 + LTR10A-int LTR ERV1 3138 3317 -4468 * 4323 143 27 34 chr2 126280567 126281630 -126974953 + LTR10A-int LTR ERV1 953 4405 -3380 416 255 11 0 chr2 126281630 126281724 -126974859 + AluSp/q SINE Alu 208 302 -1 438 316 60 18 chr2 126281730 126281898 -126974685 + MER34C LTR ERV1 256 430 -155 1477 208 46 87 chr2 126281898 126282019 -126974564 + LTR23-int LTR ERV1 1225 1349 -3774 2243 105 0 0 chr2 126282019 126282323 -126974260 + AluSg SINE Alu 3 306 -4 1477 208 46 87 chr2 126282323 126282740 -126973843 + LTR23-int LTR ERV1 1349 1741 -3382 3762 95 10 10 chr2 126282743 126283339 -126973244 - LTR8 LTR ERV1 0 691 2 2182 111 0 3 chr2 126283343 126283649 -126972934 - AluSq SINE Alu 0 313 9 23 68 0 0 chr2 126283716 126283760 -126972823 + AT_rich Low_complexity Low_complexity 1 44 0 16245 168 27 20 chr2 126284126 126284681 -126971902 - L1P5 LINE L1 -407 6460 5911 2315 90 0 3 chr2 126284681 126284993 -126971590 - AluY SINE Alu 0 311 1 243 0 0 0 chr2 126284993 126285020 -126971563 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 2119 109 0 0 chr2 126285020 126285303 -126971280 - AluSx SINE Alu -29 283 1 16245 168 27 20 chr2 126285303 126286892 -126969691 - L1P5 LINE L1 -956 5911 4335 2150 116 7 0 chr2 126286892 126287193 -126969390 - AluSq SINE Alu -10 303 1 16245 168 27 20 chr2 126287193 126288220 -126968363 - L1P5 LINE L1 -2532 4335 3317 393 22 0 0 chr2 126288220 126288266 -126968317 + (TTCC)n Simple_repeat Simple_repeat 3 48 0 2014 129 0 0 chr2 126288266 126288552 -126968031 - AluSx SINE Alu -26 286 1 16245 168 27 20 chr2 126288552 126288630 -126967953 - L1P5 LINE L1 -3550 3317 3241 2087 125 0 0 chr2 126288630 126288927 -126967656 - AluSx SINE Alu -15 297 1 16245 168 27 20 chr2 126288927 126289289 -126967294 - L1P5 LINE L1 -3626 3241 2883 2309 82 0 3 chr2 126289289 126289595 -126966988 - AluY SINE Alu -6 305 1 16245 168 27 20 chr2 126289595 126290483 -126966100 - L1P5 LINE L1 -3984 2883 2003 2271 92 3 3 chr2 126290483 126290789 -126965794 - AluSp SINE Alu -7 306 1 16245 168 27 20 chr2 126290789 126290848 -126965735 - L1P5 LINE L1 -4864 2003 1946 1582 169 16 19 chr2 126290848 126291155 -126965428 - AluSx SINE Alu -6 306 1 16245 168 27 20 chr2 126291155 126292801 -126963782 - L1P5 LINE L1 -4921 1946 162 1438 153 8 24 chr2 126292806 126293061 -126963522 + AluJo SINE Alu 40 290 -22 1573 187 39 73 chr2 126293097 126293610 -126962973 - L1M4 LINE L1 -1161 4985 4392 1788 174 7 0 chr2 126293610 126293920 -126962663 - AluSx SINE Alu 0 312 1 1573 187 39 73 chr2 126293920 126293958 -126962625 - L1M4 LINE L1 -1754 4392 4354 1565 189 54 13 chr2 126294227 126294540 -126962043 + MSTB1 LTR MaLR 4 329 -103 1311 118 69 0 chr2 126294540 126294744 -126961839 - AluSg/x SINE Alu -10 300 83 788 84 9 0 chr2 126294746 126294853 -126961730 + MSTB1 LTR MaLR 325 432 0 349 274 144 31 chr2 126294963 126295353 -126961230 + L1MC4a LINE L1 4723 5156 -990 265 333 44 0 chr2 126295501 126295636 -126960947 + L1MC4a LINE L1 5351 5491 -2317 431 241 28 79 chr2 126295817 126295920 -126960663 + L1MC4a LINE L1 5721 5809 -1999 915 202 6 6 chr2 126295920 126296093 -126960490 + FAM SINE Alu 1 173 -2 431 241 28 79 chr2 126296093 126296205 -126960378 + L1MC4a LINE L1 5809 5925 -1883 1966 81 4 0 chr2 126296684 126296980 -126959603 + L1PA8 LINE L1 5892 6188 0 676 233 31 18 chr2 126297082 126297245 -126959338 + MIR3 SINE MIR 38 202 -6 649 216 0 0 chr2 126298334 126298450 -126958133 - FLAM_A SINE Alu -17 125 10 1991 101 14 0 chr2 126298764 126299052 -126957531 - AluSx SINE Alu -20 292 1 22 0 0 0 chr2 126300777 126300799 -126955784 + AT_rich Low_complexity Low_complexity 1 22 0 969 136 49 12 chr2 126300802 126300964 -126955619 + AluSp SINE Alu 134 301 -12 873 115 0 0 chr2 126300975 126301097 -126955486 + FLAM_C SINE Alu 12 133 -10 210 191 0 0 chr2 126301109 126301151 -126955432 + (TA)n Simple_repeat Simple_repeat 2 43 0 198 0 0 0 chr2 126301151 126301173 -126955410 + (GA)n Simple_repeat Simple_repeat 2 23 0 * 279 0 0 0 chr2 126301172 126301203 -126955380 + (TG)n Simple_repeat Simple_repeat 1 31 0 998 120 0 0 chr2 126301210 126301352 -126955231 - AluSg/x SINE Alu -38 272 131 454 86 0 0 chr2 126301352 126301410 -126955173 - Alu SINE Alu -259 59 2 286 179 145 26 chr2 126301411 126301528 -126955055 - L1ME4a LINE L1 -17 6104 5974 1252 31 31 6 chr2 126301660 126301819 -126954764 + L1PA4 LINE L1 5992 6154 -1 1830 158 0 3 chr2 126302029 126302332 -126954251 - AluJo SINE Alu -10 302 1 475 234 166 14 chr2 126302505 126302650 -126953933 - MIR3 SINE MIR -9 199 33 1902 116 49 0 chr2 126302654 126302939 -126953644 - AluSx SINE Alu -13 299 1 293 170 0 0 chr2 126303071 126303118 -126953465 + L1MC5 LINE L1 7193 7239 -722 583 207 115 19 chr2 126303821 126304082 -126952501 + L1MC5 LINE L1 7289 7574 -387 1686 181 81 80 chr2 126304113 126304396 -126952187 + L1M4 LINE L1 3305 3586 -2560 1964 103 0 31 chr2 126304396 126304712 -126951871 + AluSg SINE Alu 1 307 0 1849 122 13 49 chr2 126304721 126304858 -126951725 + AluSx SINE Alu 1 141 -171 1968 111 0 31 chr2 126304858 126305147 -126951436 + AluSg SINE Alu 1 280 -30 1303 151 38 126 chr2 126304995 126305147 -126951436 + AluJo SINE Alu 4 115 -187 201 39 0 0 chr2 126305147 126305173 -126951410 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 1849 122 13 49 chr2 126305173 126305338 -126951245 + AluSx SINE Alu 139 293 -19 1303 151 38 126 chr2 126305173 126305338 -126951245 + AluJo SINE Alu 115 293 -9 1686 181 81 80 chr2 126305338 126305488 -126951095 + L1M4 LINE L1 3593 3741 -2405 1722 185 0 0 chr2 126305488 126305780 -126950803 - AluJb SINE Alu -20 292 1 1686 181 81 80 chr2 126305780 126305949 -126950634 + L1M4 LINE L1 3741 3897 -2249 233 283 17 0 chr2 126305935 126305951 -126950632 + AluSg/x SINE Alu 121 137 -165 1912 127 3 26 chr2 126305951 126306259 -126950324 + AluJb SINE Alu 3 303 -9 1403 158 89 0 chr2 126306266 126306525 -126950058 + AluJb SINE Alu 1 282 -30 342 0 0 0 chr2 126306534 126306572 -126950011 + (CA)n Simple_repeat Simple_repeat 1 38 0 559 85 98 0 chr2 126306590 126306672 -126949911 - L1MC1 LINE L1 -108 6225 6136 723 128 6 98 chr2 126306675 126306733 -126949850 + L1MB8 LINE L1 6030 6092 -86 1573 139 77 0 chr2 126306733 126307006 -126949577 - AluJb SINE Alu -14 298 5 723 128 6 98 chr2 126307006 126307111 -126949472 + L1MB8 LINE L1 6092 6178 0 2288 269 205 18 chr2 126307256 126307712 -126948871 + L2 LINE L2 1729 2098 -1215 1586 159 79 0 chr2 126307712 126307989 -126948594 - AluJb SINE Alu -13 299 1 2288 269 205 18 chr2 126307989 126308857 -126947726 + L2 LINE L2 2098 3313 0 444 298 71 36 chr2 126309011 126309180 -126947403 + MIR SINE MIR 22 189 -63 235 279 68 61 chr2 126309568 126309715 -126946868 + MIR SINE MIR 111 258 -4 1999 97 31 3 chr2 126309775 126310064 -126946519 + AluSc SINE Alu 1 297 -12 1911 130 11 0 chr2 126310175 126310459 -126946124 - AluSx SINE Alu -25 287 1 543 144 41 10 chr2 126310498 126310595 -126945988 - HY1 scRNA scRNA -1 111 12 1855 167 65 8 chr2 126310610 126311049 -126945534 + L1MB2 LINE L1 5667 6163 -17 1694 133 3 23 chr2 126311651 126311951 -126944632 + AluJb SINE Alu 1 294 -18 249 33 0 0 chr2 126312739 126312769 -126943814 + (T)n Simple_repeat Simple_repeat 1 30 0 23 33 0 0 chr2 126313670 126313700 -126942883 + AT_rich Low_complexity Low_complexity 1 30 0 21 71 0 0 chr2 126314173 126314215 -126942368 + AT_rich Low_complexity Low_complexity 1 42 0 2180 119 0 0 chr2 126314836 126315147 -126941436 - AluSq SINE Alu -2 311 1 2342 69 0 10 chr2 126315172 126315477 -126941106 - AluY SINE Alu -9 302 1 1529 193 24 7 chr2 126315825 126316120 -126940463 + AluJb SINE Alu 1 300 -12 384 326 47 17 chr2 126316845 126317017 -126939566 - L3 LINE CR1 -167 1410 1234 250 265 44 0 chr2 126317076 126317144 -126939439 - L2 LINE L2 -63 3209 3139 1651 136 7 51 chr2 126317249 126317544 -126939039 - AluJb SINE Alu -2 310 29 1853 105 3 21 chr2 126317579 126317865 -126938718 - AluSx SINE Alu -31 281 1 193 290 188 0 chr2 126317878 126317947 -126938636 - L3 LINE CR1 -459 1118 1037 732 209 36 80 chr2 126317983 126318208 -126938375 + MIR SINE MIR 40 254 -8 239 253 116 96 chr2 126318247 126318393 -126938190 - MER5B DNA MER1_type -24 154 6 270 289 33 50 chr2 126318858 126318979 -126937604 - L3 LINE CR1 -615 962 844 2081 107 3 0 chr2 126319493 126319782 -126936801 - AluSx SINE Alu -22 290 1 1657 147 68 10 chr2 126319802 126320094 -126936489 - AluJo SINE Alu 0 312 4 302 281 68 35 chr2 126320106 126320221 -126936362 - L1ME LINE L1 -392 5729 5619 759 150 23 30 chr2 126320221 126320354 -126936229 - FLAM_A SINE Alu -1 132 1 302 281 68 35 chr2 126320354 126320548 -126936035 - L1ME LINE L1 -502 5619 5410 217 215 21 97 chr2 126320851 126320944 -126935639 + MER5A DNA MER1_type 99 184 -5 403 324 60 16 chr2 126321323 126321508 -126935075 - MIR SINE MIR -17 245 53 215 255 108 102 chr2 126321581 126321738 -126934845 + L3 LINE CR1 1410 1567 -10 1718 146 12 31 chr2 126321806 126321854 -126934729 - L1MB4 LINE L1 -2 6178 6131 3843 85 0 0 chr2 126321854 126322350 -126934233 - L1PA6 LINE L1 -4 6150 5655 2055 115 3 10 chr2 126322350 126322654 -126933929 - AluSp SINE Alu -11 302 1 1718 146 12 31 chr2 126322654 126322926 -126933657 - L1MB4 LINE L1 -47 6133 5863 2388 77 0 3 chr2 126322926 126323238 -126933345 - AluY SINE Alu 0 311 1 461 249 0 6 chr2 126323575 126324109 -126932474 + CT-rich Low_complexity Low_complexity 1 530 0 429 230 0 0 chr2 126324138 126324316 -126932267 + CT-rich Low_complexity Low_complexity 1 178 0 324 254 0 0 chr2 126324347 126324524 -126932059 + CT-rich Low_complexity Low_complexity 3 179 0 465 217 0 0 chr2 126324537 126324712 -126931871 + CT-rich Low_complexity Low_complexity 1 175 0 198 225 0 0 chr2 126324732 126324812 -126931771 + CT-rich Low_complexity Low_complexity 3 82 0 570 227 0 0 chr2 126324825 126325368 -126931215 + CT-rich Low_complexity Low_complexity 1 543 0 460 207 4 15 chr2 126325389 126325663 -126930920 + CT-rich Low_complexity Low_complexity 1 271 0 2086 101 7 0 chr2 126325869 126326166 -126930417 - AluSc SINE Alu -10 299 1 291 266 80 64 chr2 126326761 126326949 -126929634 + MIR SINE MIR 72 262 0 627 251 212 34 chr2 126327067 126327533 -126929050 - MLT1H1 LTR MaLR -5 550 2 280 343 81 35 chr2 126327729 126327927 -126928656 + L3 LINE CR1 1311 1517 -60 2069 121 10 0 chr2 126328470 126328767 -126927816 - AluSx SINE Alu -12 300 1 2069 86 14 0 chr2 126328767 126329047 -126927536 - AluSx SINE Alu -24 288 5 1485 183 4 0 chr2 126331149 126331422 -126925161 - AluJb SINE Alu -21 291 18 263 244 70 0 chr2 126381513 126381599 -126874984 - MIR SINE MIR -72 136 45 2015 135 3 0 chr2 126382061 126382358 -126874225 - AluSx SINE Alu -14 298 1 1664 181 13 84 chr2 126382718 126383111 -126873472 - MLT1A1 LTR MaLR 0 365 1 349 290 129 0 chr2 126383774 126383898 -126872685 - MIR SINE MIR -44 218 79 315 352 106 11 chr2 126384483 126384662 -126871921 - MIR SINE MIR -16 246 51 929 193 16 31 chr2 126384704 126384896 -126871687 + MER5A DNA MER1_type 1 189 0 338 315 54 0 chr2 126384909 126385020 -126871563 + MIR SINE MIR 117 233 -29 524 208 40 8 chr2 126386755 126386880 -126869703 - MER106A DNA MER1_type 0 236 108 229 192 27 0 chr2 126386888 126386917 -126869666 + (TCTA)n Simple_repeat Simple_repeat 4 31 -47 2085 114 0 0 chr2 126386917 126387214 -126869369 - AluSg SINE Alu -13 297 1 229 192 27 0 chr2 126387214 126387257 -126869326 + (TCTA)n Simple_repeat Simple_repeat 31 78 0 411 235 157 20 chr2 126387384 126387537 -126869046 - MIR SINE MIR 0 262 89 1857 228 77 18 chr2 126388493 126388949 -126867634 + MER110 LTR ERV1 9 491 0 419 202 77 0 chr2 126389105 126389209 -126867374 + L2 LINE L2 2958 3069 -244 1333 169 124 0 chr2 126389221 126389488 -126867095 + AluJb SINE Alu 1 300 -12 23 22 0 44 chr2 126389609 126389633 -126866950 + AT_rich Low_complexity Low_complexity 1 25 -18 1543 192 3 7 chr2 126389633 126389941 -126866642 - AluJo SINE Alu -4 308 2 405 58 0 0 chr2 126389941 126389993 -126866590 + (TG)n Simple_repeat Simple_repeat 2 53 0 23 22 0 44 chr2 126389993 126390012 -126866571 + AT_rich Low_complexity Low_complexity 23 43 0 979 158 0 19 chr2 126390486 126390618 -126865965 - AluSq SINE Alu -48 265 135 2355 77 0 6 chr2 126390618 126390931 -126865652 - AluY SINE Alu 0 311 1 979 158 0 19 chr2 126390931 126390956 -126865627 - AluSq SINE Alu -178 135 111 278 312 27 2 chr2 126391014 126391128 -126865455 - MER5B DNA MER1_type -1 188 70 351 0 0 0 chr2 126391134 126391173 -126865410 + (TG)n Simple_repeat Simple_repeat 2 40 0 316 261 73 73 chr2 126391269 126391434 -126865149 + L1ME LINE L1 5597 5719 -402 1907 116 60 0 chr2 126391661 126391946 -126864637 - AluSx SINE Alu -10 302 1 919 276 77 33 chr2 126391982 126392597 -126863986 - L2 LINE L2 -8 3305 2673 1228 171 42 35 chr2 126392597 126392880 -126863703 + MER33 DNA MER1_type 1 273 -51 22 0 0 0 chr2 126392892 126392914 -126863669 + AT_rich Low_complexity Low_complexity 1 22 0 336 96 19 0 chr2 126392936 126392988 -126863595 + MER33 DNA MER1_type 307 359 -4 1749 270 122 24 chr2 126393011 126393821 -126862762 - L2 LINE L2 -686 2628 1739 2072 98 0 43 chr2 126393858 126394183 -126862400 + AluSx SINE Alu 1 311 -1 21 71 0 0 chr2 126394216 126394258 -126862325 + AT_rich Low_complexity Low_complexity 1 42 0 514 264 127 20 chr2 126394740 126394937 -126861646 - MIR SINE MIR -5 257 40 326 217 217 0 chr2 126395503 126395623 -126860960 + MIR SINE MIR 111 256 -6 2097 125 0 6 chr2 126396090 126396401 -126860182 - AluSx SINE Alu -3 309 1 264 304 25 13 chr2 126397475 126397547 -126859036 + polypyrimidine Low_complexity Low_complexity 3 78 -4 2044 139 0 0 chr2 126397547 126397856 -126858727 - AluSx SINE Alu -3 309 1 228 111 0 0 chr2 126397865 126397901 -126858682 + (TTC)n Simple_repeat Simple_repeat 2 37 0 227 186 0 0 chr2 126398331 126398374 -126858209 + (CAT)n Simple_repeat Simple_repeat 3 45 0 3700 168 75 68 chr2 126398470 126399326 -126857257 - MER21B LTR ERV1 -1 862 1 369 284 56 31 chr2 126399407 126399569 -126857014 - MIR SINE MIR -5 257 92 2670 211 95 71 chr2 126399654 126400579 -126856004 + Zaphod DNA AcHobo 9 961 -3070 2242 87 7 0 chr2 126400579 126400878 -126855705 - AluSq SINE Alu -12 301 1 2670 211 95 71 chr2 126400878 126400929 -126855654 + Zaphod DNA AcHobo 961 1009 -3022 1419 227 47 8 chr2 126400896 126401279 -126855304 + Zaphod DNA AcHobo 3585 3982 -49 * 304 211 0 84 chr2 126401322 126401393 -126855190 + MER115 DNA AcHobo 629 693 0 3360 140 122 35 chr2 126401414 126402034 -126854549 - L1MA6 LINE L1 -1 6299 5546 1986 113 30 13 chr2 126402034 126402336 -126854247 - AluSq SINE Alu -6 307 1 3360 140 122 35 chr2 126402336 126402484 -126854099 - L1MA6 LINE L1 -754 5546 5412 221 228 148 30 chr2 126402489 126402590 -126853993 - MIR SINE MIR -132 130 18 1095 173 112 80 chr2 126402812 126402867 -126853716 - MER33 DNA MER1_type -2261 324 272 1510 171 4 0 chr2 126402867 126403131 -126853452 + AluJb SINE Alu 1 265 -47 1095 173 112 80 chr2 126403131 126403388 -126853195 - MER33 DNA MER1_type -2313 272 2 383 257 99 99 chr2 126404094 126404347 -126852236 + MIR SINE MIR 8 260 -2 2238 89 7 0 chr2 126404556 126404860 -126851723 - AluSx SINE Alu -6 306 1 1100 186 107 82 chr2 126405802 126405922 -126850661 + MLT1A2 LTR MaLR 1 117 -257 2311 52 42 0 chr2 126405922 126406211 -126850372 - AluYa5 SINE Alu -2 309 9 1100 186 107 82 chr2 126406211 126406455 -126850128 + MLT1A2 LTR MaLR 117 374 0 220 288 74 49 chr2 126406492 126406655 -126849928 + MIR SINE MIR 22 188 -74 1027 217 32 29 chr2 126407162 126407443 -126849140 + MER33 DNA MER1_type 43 324 0 185 220 242 11 chr2 126408009 126408100 -126848483 + MIR SINE MIR 32 143 -119 491 277 221 13 chr2 126408269 126408504 -126848079 + MLT1K LTR MaLR 137 420 -168 6129 125 30 19 chr2 126408704 126410340 -126846243 - L1PA13 LINE L1 -236 5927 4274 1262 161 36 0 chr2 126410340 126410563 -126846020 - MLT2C2 LTR ERVL -214 250 20 236 253 66 11 chr2 126410595 126410686 -126845897 + MIR3 SINE MIR 86 181 -27 476 296 132 0 chr2 126412071 126412260 -126844323 - MIR SINE MIR 0 262 49 300 292 118 7 chr2 126412502 126412646 -126843937 + MIR SINE MIR 2 161 -101 265 284 125 34 chr2 126413558 126413734 -126842849 - L2 LINE L2 0 3272 3081 502 254 55 12 chr2 126413959 126414124 -126842459 - MIR SINE MIR -86 176 5 538 242 23 0 chr2 126414144 126414272 -126842311 + Charlie5 DNA MER1_type 1 131 -2481 1196 188 97 42 chr2 126414273 126414634 -126841949 + Charlie5 DNA MER1_type 2236 2616 0 232 98 0 59 chr2 126414738 126414789 -126841794 + (TTTC)n Simple_repeat Simple_repeat 3 50 0 1568 194 16 25 chr2 126414791 126415106 -126841477 - AluJo SINE Alu 0 312 1 248 174 0 0 chr2 126416730 126416776 -126839807 - L2 LINE L2 0 3272 3227 325 220 33 107 chr2 126418866 126419016 -126837567 + LTR67 LTR ERVL 31 169 -388 674 223 40 40 chr2 126419310 126419534 -126837049 + MER69 DNA AcHobo 1476 1699 -827 338 216 11 34 chr2 126419533 126419621 -126836962 + LTR67 LTR ERVL 470 555 -2 * 435 224 75 15 chr2 126419665 126419799 -126836784 + MIR SINE MIR 119 260 -2 5068 85 10 26 chr2 126419821 126419996 -126836587 + L1PA14 LINE L1 5433 5609 -552 2693 55 0 0 chr2 126419996 126420307 -126836276 + AluY SINE Alu 1 311 0 5068 85 10 26 chr2 126420307 126420857 -126835726 + L1PA14 LINE L1 5609 6146 -15 572 228 24 42 chr2 126422290 126422428 -126834155 + MER103 DNA DNA 1 137 -29 2873 117 26 5 chr2 126422428 126422846 -126833737 - MSTA LTR MaLR 0 428 2 572 228 24 42 chr2 126422846 126422874 -126833709 + MER103 DNA DNA 137 164 -2 690 171 55 75 chr2 126422958 126423157 -126833426 + L1MA9 LINE L1 6088 6282 -30 2242 105 10 0 chr2 126423183 126423487 -126833096 - AluSx SINE Alu -5 307 1 906 92 0 8 chr2 126423517 126423637 -126832946 + AluSg SINE Alu 17 135 -175 241 162 0 0 chr2 126423639 126423676 -126832907 + Alu SINE Alu 96 132 -34 371 278 123 36 chr2 126424501 126424926 -126831657 - L1ME LINE L1 -377 5785 5296 967 250 175 30 chr2 126425207 126425647 -126830936 + MER101B LTR ERV1 35 538 -32 337 248 39 31 chr2 126425680 126425828 -126830755 - L1 LINE L1 -1138 5008 4860 200 239 90 15 chr2 126425871 126425938 -126830645 - MIR SINE MIR -69 139 68 252 244 22 22 chr2 126425986 126426076 -126830507 + CT-rich Low_complexity Low_complexity 3 92 0 198 0 0 0 chr2 126426929 126426951 -126829632 + (TGGG)n Simple_repeat Simple_repeat 4 25 0 241 247 209 21 chr2 126427324 126427492 -126829091 - MLT1J1 LTR MaLR -284 199 3 208 194 111 0 chr2 126427548 126427620 -126828963 + L2 LINE L2 3014 3093 -179 2138 212 22 38 chr2 126427642 126428146 -126828437 - LTR31 LTR ERV1 -15 604 109 231 0 0 0 chr2 126428171 126428204 -126828379 + L1PA3 LINE L1 6120 6152 -3 389 240 20 0 chr2 126428406 126428506 -126828077 + LTR31 LTR ERV1 331 432 -187 1854 154 0 0 chr2 126429619 126429938 -126826645 + L1P LINE L1 4975 5293 -853 641 284 60 15 chr2 126429938 126430139 -126826444 - MIR SINE MIR -36 226 17 239 282 14 14 chr2 126430156 126430227 -126826356 - MIR SINE MIR -160 102 32 596 144 76 45 chr2 126430578 126430710 -126825873 - MER74A LTR ERVL 0 558 423 579 185 9 0 chr2 126430709 126430817 -126825766 - MER74A LTR ERVL -449 109 1 * 345 167 125 0 chr2 126431144 126431216 -126825367 + MER91B DNA MER1_type 51 131 -59 246 62 0 0 chr2 126432289 126432321 -126824262 + (TG)n Simple_repeat Simple_repeat 1 32 0 180 0 0 0 chr2 126432320 126432340 -126824243 + (GA)n Simple_repeat Simple_repeat 1 20 0 * 230 183 14 84 chr2 126432825 126432896 -126823687 - L2 LINE L2 -2 3311 3246 8651 228 51 38 chr2 126433739 126434638 -126821945 - L1ME1 LINE L1 -178 6248 5362 1767 140 38 98 chr2 126434638 126435037 -126821546 - THE1C LTR MaLR 0 375 1 8651 228 51 38 chr2 126435037 126436755 -126819828 - L1ME1 LINE L1 -1064 5362 3668 2214 121 0 0 chr2 126436755 126437053 -126819530 - AluSx SINE Alu -14 298 1 8651 228 51 38 chr2 126437053 126437615 -126818968 - L1ME1 LINE L1 -2758 3668 3025 2129 107 0 0 chr2 126437615 126437966 -126818617 - AluSc SINE Alu 0 351 1 8651 228 51 38 chr2 126437966 126438177 -126818406 - L1ME1 LINE L1 -3401 3025 2818 2458 243 39 12 chr2 126438205 126438774 -126817809 + MLT1E LTR MaLR 8 591 -2 2821 200 141 72 chr2 126438777 126438980 -126817603 - L1ME1 LINE L1 -3604 2802 2614 198 0 0 0 chr2 126438980 126439002 -126817581 + (TTCC)n Simple_repeat Simple_repeat 3 24 0 2028 124 14 3 chr2 126439002 126439293 -126817290 - AluSx SINE Alu -18 294 1 2821 200 141 72 chr2 126439293 126439893 -126816690 - L1ME1 LINE L1 -3792 2614 2057 2084 108 48 67 chr2 126439893 126440264 -126816319 + THE1B LTR MaLR 1 364 0 2821 200 141 72 chr2 126440264 126440326 -126816257 - L1ME1 LINE L1 -4349 2057 2001 1401 170 74 39 chr2 126440326 126440641 -126815942 - AluJo SINE Alu 0 312 4 2821 200 141 72 chr2 126440641 126440745 -126815838 - L1ME1 LINE L1 -4405 2001 1906 1895 161 2 97 chr2 126440745 126441148 -126815435 - MLT1A1 LTR MaLR 0 365 1 2821 200 141 72 chr2 126441148 126442101 -126814482 - L1ME1 LINE L1 -4500 1906 783 217 244 0 0 chr2 126442536 126442581 -126814002 + A-rich Low_complexity Low_complexity 2 46 0 456 278 8 15 chr2 126443154 126443287 -126813296 - MLT1L LTR MaLR -18 597 466 467 339 77 12 chr2 126443332 126443657 -126812926 - MLT1L LTR MaLR -230 385 40 4878 177 48 4 chr2 126443657 126444460 -126812123 + L1MB1 LINE L1 4478 5244 -924 213 39 0 0 chr2 126444460 126444486 -126812097 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 4878 177 48 4 chr2 126444486 126445322 -126811261 + L1MB1 LINE L1 5244 6168 0 390 275 63 7 chr2 126446295 126446437 -126810146 - MIR3 SINE MIR -10 198 49 383 191 48 0 chr2 126447092 126447176 -126809407 + L1MC5 LINE L1 7246 7333 -628 275 189 57 0 chr2 126447190 126447243 -126809340 - L1MC5 LINE L1 -655 7306 7251 * 581 214 48 35 chr2 126447242 126447387 -126809196 + L1MC5 LINE L1 7761 7907 -54 279 268 140 32 chr2 126448054 126448211 -126808372 - MLT1J LTR MaLR -312 199 26 2000 148 45 26 chr2 126450844 126451165 -126805418 - L1MB2 LINE L1 -9 6162 5831 688 222 8 0 chr2 126451165 126451291 -126805292 - FLAM_A SINE Alu -2 131 5 2000 148 45 26 chr2 126451291 126451348 -126805235 - L1MB2 LINE L1 -340 5831 5777 1208 148 88 24 chr2 126451348 126451561 -126805022 - L1MB2 LINE L1 -655 5528 5330 180 0 0 0 chr2 126451561 126451581 -126805002 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1208 148 88 24 chr2 126451581 126451773 -126804810 - L1MB2 LINE L1 -853 5330 5105 802 293 25 11 chr2 126451782 126452050 -126804533 - LTR16C LTR ERVL -34 457 78 2450 145 24 29 chr2 126452164 126452585 -126803998 - MSTB1 LTR MaLR -13 419 1 272 205 60 24 chr2 126452585 126452668 -126803915 + MIR SINE MIR 69 154 -108 2475 88 3 0 chr2 126454311 126454617 -126801966 + AluSp SINE Alu 1 307 -6 353 222 40 56 chr2 126455627 126455753 -126800830 - MLT1K LTR MaLR -18 570 447 467 354 52 5 chr2 126458378 126458590 -126797993 - MIR SINE MIR -37 225 4 474 325 46 39 chr2 126460791 126460971 -126795612 - L1MC4a LINE L1 -1885 5923 5739 2489 50 3 0 chr2 126460971 126461274 -126795309 + AluY SINE Alu 1 304 -7 474 325 46 39 chr2 126461274 126461376 -126795207 - L1MC4a LINE L1 -2069 5739 5639 2066 101 0 10 chr2 126461589 126461886 -126794697 - AluSq SINE Alu -18 295 2 327 342 13 111 chr2 126461947 126462263 -126794320 - L2 LINE L2 -62 3210 2926 258 358 18 9 chr2 126462325 126462434 -126794149 - L2 LINE L2 -527 2787 2678 356 291 31 22 chr2 126462442 126462642 -126793941 - L1M2 LINE L1 -832 5459 5254 788 341 42 32 chr2 126462667 126463165 -126793418 - L1MC4a LINE L1 -951 5195 4693 2096 166 69 62 chr2 126463429 126463881 -126792702 + LTR42 LTR ERVL 14 468 -27 503 282 94 20 chr2 126464112 126464314 -126792269 + MIR SINE MIR 20 236 -26 1881 139 16 26 chr2 126464391 126464700 -126791883 - AluSx SINE Alu -6 306 1 235 254 0 0 chr2 126465224 126465279 -126791304 + A-rich Low_complexity Low_complexity 1 55 0 2427 61 0 7 chr2 126466305 126466615 -126789968 + AluY SINE Alu 1 308 -3 1084 264 60 19 chr2 126466625 126467041 -126789542 - LTR16A LTR ERVL 0 450 18 439 281 112 50 chr2 126467160 126467775 -126788808 - L2 LINE L2 -2 3311 2437 43393 33 23 3 chr2 126468861 126474890 -126781693 - L1PA2 LINE L1 0 6155 1 699 216 90 69 chr2 126475238 126475483 -126781100 + MIR SINE MIR 2 251 -11 456 295 97 19 chr2 126475483 126475690 -126780893 - MIR SINE MIR -4 258 36 198 351 13 0 chr2 126476408 126476485 -126780098 - MIR SINE MIR -71 137 60 901 133 5 109 chr2 126477033 126477243 -126779340 - MER53 DNA DNA -1 188 1 218 272 208 8 chr2 126477304 126477429 -126779154 + L2 LINE L2 3108 3257 -15 403 41 0 0 chr2 126477473 126477522 -126779061 + MADE1 DNA Mariner 1 49 -31 288 188 0 0 chr2 126477738 126477802 -126778781 + (CTAAA)n Simple_repeat Simple_repeat 3 66 0 252 289 26 0 chr2 126478558 126478634 -126777949 - L3 LINE CR1 -294 1283 1206 789 155 16 0 chr2 126479116 126479245 -126777338 + FLAM_C SINE Alu 1 131 -2 250 245 19 0 chr2 126480210 126480263 -126776320 + MER58B DNA MER1_type 1 54 -287 3288 136 32 11 chr2 126480265 126480800 -126775783 - L1PA15 LINE L1 0 6165 5620 2802 136 10 42 chr2 126481323 126481350 -126775233 - MER31A LTR ERV1 0 485 459 2195 104 0 10 chr2 126481350 126481659 -126774924 - AluSx SINE Alu -6 306 1 2802 136 10 42 chr2 126481659 126482018 -126774565 - MER31A LTR ERV1 -26 459 116 2412 62 0 7 chr2 126482018 126482327 -126774256 + AluY SINE Alu 1 307 -4 2802 136 10 42 chr2 126482327 126482440 -126774143 - MER31A LTR ERV1 -369 116 1 421 228 103 41 chr2 126482606 126482669 -126773914 - MIR SINE MIR -9 253 195 2385 177 111 11 chr2 126482669 126483137 -126773446 - MLT2B2 LTR ERVL 0 515 1 421 228 103 41 chr2 126483137 126483218 -126773365 - MIR SINE MIR -67 195 100 1282 128 64 0 chr2 126483290 126483493 -126773090 + MER30 DNA MER1_type 15 230 0 457 287 47 0 chr2 126483521 126483671 -126772912 + MIR SINE MIR 71 227 -35 190 310 86 17 chr2 126484178 126484352 -126772231 - MER5A DNA MER1_type -3 186 1 324 364 113 5 chr2 126486301 126486496 -126770087 + MIR SINE MIR 20 235 -27 851 259 75 26 chr2 126486824 126487137 -126769446 + LTR40a LTR ERVL 135 517 -2 2436 58 0 7 chr2 126487304 126487612 -126768971 + AluY SINE Alu 1 306 -5 189 245 11 53 chr2 126488002 126488096 -126768487 - L2 LINE L2 -281 2991 2902 186 366 65 16 chr2 126488640 126488763 -126767820 + L2 LINE L2 3132 3260 -12 265 372 13 0 chr2 126489805 126489883 -126766700 + L2 LINE L2 3115 3193 -79 1123 239 23 87 chr2 126491833 126491930 -126764653 - MER58B DNA MER1_type -2095 325 223 2228 88 0 0 chr2 126491930 126492224 -126764359 + AluSg SINE Alu 3 296 -14 1123 239 23 87 chr2 126492224 126492237 -126764346 - MER58B DNA MER1_type -2197 223 211 2205 122 9 35 chr2 126492237 126492581 -126764002 + MER1B DNA MER1_type 3 337 0 1123 239 23 87 chr2 126492581 126492816 -126763767 - MER58B DNA MER1_type -2209 211 1 210 233 50 0 chr2 126492824 126492884 -126763699 + MER5A DNA MER1_type 1 63 -126 2146 124 0 0 chr2 126492965 126493272 -126763311 - AluSg SINE Alu -2 308 2 7552 41 0 0 chr2 126493736 126494794 -126761789 - L1PA5 LINE L1 0 6154 5098 10035 47 7 1 chr2 126494794 126496030 -126760553 + L1PA5 LINE L1 3828 5071 -1075 608 285 123 37 chr2 126497162 126497513 -126759070 + MLT1J LTR MaLR 19 399 -112 1343 193 146 106 chr2 126497580 126498061 -126758522 + MLT1E3 LTR MaLR 117 616 -8 2314 212 52 5 chr2 126498436 126498875 -126757708 + MER66B LTR ERV1 27 486 0 282 116 0 0 chr2 126499682 126499725 -126756858 + (TTC)n Simple_repeat Simple_repeat 3 45 0 1848 113 11 0 chr2 126499725 126499990 -126756593 - AluSp SINE Alu -45 268 1 315 229 14 0 chr2 126501151 126501221 -126755362 + L2 LINE L2 3192 3262 -10 2106 75 10 26 chr2 126501280 126501588 -126754995 - AluY SINE Alu -8 303 1 2234 96 3 0 chr2 126501610 126501911 -126754672 + AluSp SINE Alu 1 302 -11 184 300 20 0 chr2 126502674 126502724 -126753859 - L2 LINE L2 -4 3268 3218 296 276 184 6 chr2 126502816 126502979 -126753604 - L2 LINE L2 -1 3271 3080 711 182 77 7 chr2 126503098 126503241 -126753342 - LTR32 LTR ERVL 0 471 319 2008 177 20 12 chr2 126503273 126503618 -126752965 - LTR32 LTR ERVL -110 361 14 1711 161 0 4 chr2 126503803 126504113 -126752470 + AluJo SINE Alu 9 317 0 448 225 98 119 chr2 126504476 126504720 -126751863 - MIR SINE MIR -10 252 14 2240 109 0 0 chr2 126505024 126505326 -126751257 + AluSq SINE Alu 1 302 -11 325 343 61 28 chr2 126505604 126505785 -126750798 - L1ME4a LINE L1 -49 6072 5886 36278 33 18 4 chr2 126505785 126511829 -126744754 - L1PA3 LINE L1 -3 6152 1 570 305 67 62 chr2 126511830 126512248 -126744335 - L1ME4a LINE L1 -229 5892 5469 3562 52 4 20 chr2 126512248 126512707 -126743876 - L1PA8 LINE L1 0 6172 5721 570 305 67 62 chr2 126512707 126512882 -126743701 - L1ME4a LINE L1 -652 5469 5296 335 264 27 9 chr2 126513742 126513852 -126742731 + CT-rich Low_complexity Low_complexity 3 114 0 621 283 170 18 chr2 126513858 126514481 -126742102 + L2 LINE L2 2140 2857 -457 353 225 12 0 chr2 126515460 126515535 -126741048 + LTR37B LTR ERV1 1 76 -392 1104 206 62 16 chr2 126515535 126515780 -126740803 + Charlie1a DNA MER1_type 1 260 -2501 209 56 0 28 chr2 126515780 126515816 -126740767 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 1104 206 62 16 chr2 126515816 126515827 -126740756 + Charlie1a DNA MER1_type 260 269 -1186 * 3492 175 24 35 chr2 126515825 126516579 -126740004 + Charlie1a DNA MER1_type 710 1455 0 776 226 70 77 chr2 126516579 126516982 -126739601 + LTR37B LTR ERV1 69 468 0 240 325 98 5 chr2 126517033 126517236 -126739347 + MIR SINE MIR 2 223 -39 1853 156 12 105 chr2 126517267 126517696 -126738887 - MLT1B LTR MaLR -1 389 1 1645 71 38 0 chr2 126518473 126518684 -126737899 - MER30 DNA MER1_type -7 223 5 392 238 38 0 chr2 126518684 126518789 -126737794 - MIR SINE MIR -69 193 85 379 71 0 18 chr2 126518793 126518849 -126737734 - MLT2A2 LTR ERVL 0 453 399 338 192 8 24 chr2 126518849 126518974 -126737609 + (TA)n Simple_repeat Simple_repeat 1 123 0 289 232 40 0 chr2 126518996 126519095 -126737488 + L1MC4 LINE L1 6614 6716 -1326 228 122 0 0 chr2 126519100 126519141 -126737442 + (TA)n Simple_repeat Simple_repeat 2 42 0 216 179 0 45 chr2 126519246 126519313 -126737270 + (TA)n Simple_repeat Simple_repeat 2 65 0 360 213 0 43 chr2 126519313 126519407 -126737176 + L1MC4 LINE L1 6614 6703 -1339 2925 90 20 8 chr2 126519407 126519806 -126736777 - MLT2A1 LTR ERVL -40 404 1 358 290 89 12 chr2 126521177 126521346 -126735237 + LTR16C LTR ERVL 310 491 0 334 208 104 28 chr2 126521367 126521473 -126735110 + MIR3 SINE MIR 90 203 -5 243 310 190 9 chr2 126522103 126522219 -126734364 - MIR SINE MIR -12 250 114 306 87 0 0 chr2 126522562 126522608 -126733975 + (CA)n Simple_repeat Simple_repeat 2 47 0 231 36 0 0 chr2 126522611 126522639 -126733944 + (GA)n Simple_repeat Simple_repeat 1 28 0 225 294 157 7 chr2 126522810 126522963 -126733620 + MIR3 SINE MIR 30 205 -3 1140 112 0 0 chr2 126523106 126523258 -126733325 - AluSg SINE Alu -158 152 1 252 246 0 0 chr2 126523729 126523786 -126732797 + MIR SINE MIR 76 132 -130 226 161 16 48 chr2 126523973 126524035 -126732548 + T-rich Low_complexity Low_complexity 6 65 0 309 324 195 0 chr2 126524432 126524617 -126731966 - MIR SINE MIR -3 259 39 265 316 92 23 chr2 126525098 126525316 -126731267 + MIR SINE MIR 29 261 -1 465 243 158 0 chr2 126525988 126526140 -126730443 + MIR SINE MIR 20 195 -67 1697 179 0 20 chr2 126526197 126526494 -126730089 - AluJo SINE Alu -21 291 1 733 303 14 0 chr2 126526660 126526881 -126729702 + MIR SINE MIR 11 234 -28 212 233 150 0 chr2 126526873 126526933 -126729650 + L2 LINE L2 2617 2685 -629 * 1642 209 0 0 chr2 126526935 126527227 -126729356 + AluJo SINE Alu 1 292 -20 608 316 101 30 chr2 126527282 126527709 -126728874 + L2 LINE L2 2856 3312 -1 192 364 74 8 chr2 126528265 126528386 -126728197 - MIR SINE MIR -70 192 64 193 294 108 39 chr2 126529346 126529448 -126727135 + MER5B DNA MER1_type 49 157 -21 2244 99 17 3 chr2 126530220 126530522 -126726061 - AluSx SINE Alu -6 306 1 22 35 0 0 chr2 126530522 126530551 -126726032 + AT_rich Low_complexity Low_complexity 1 29 0 237 276 184 6 chr2 126533017 126533180 -126723403 - L2 LINE L2 -1 3271 3080 702 182 77 7 chr2 126533299 126533442 -126723141 - LTR32 LTR ERVL 0 471 319 1993 178 21 0 chr2 126533487 126533819 -126722764 - LTR32 LTR ERVL -119 352 14 1803 165 0 4 chr2 126534004 126534314 -126722269 + AluJo SINE Alu 9 317 0 354 280 98 0 chr2 126534677 126534809 -126721774 - MIR SINE MIR -10 252 108 293 151 30 15 chr2 126534813 126534921 -126721662 - MIR SINE MIR -93 169 14 336 202 4 130 chr2 126535189 126535225 -126721358 + L1MB7 LINE L1 6072 6111 -73 2226 133 0 0 chr2 126535225 126535527 -126721056 + AluSx SINE Alu 1 302 -10 336 202 4 130 chr2 126535527 126535605 -126720978 + L1MB7 LINE L1 6111 6183 -1 218 195 0 0 chr2 126536136 126536177 -126720406 + MIR SINE MIR 112 152 -110 230 292 94 59 chr2 126536472 126536674 -126719909 + L2 LINE L2 3104 3312 -1 350 115 0 0 chr2 126536718 126536770 -126719813 + Alu SINE Alu 1 52 -250 27 0 0 0 chr2 126537144 126537171 -126719412 + AT_rich Low_complexity Low_complexity 1 27 0 2145 119 0 0 chr2 126537778 126538102 -126718481 + AluSx SINE Alu 1 312 0 289 289 204 7 chr2 126539553 126539695 -126716888 - MIR SINE MIR -68 194 25 389 245 224 0 chr2 126540908 126541051 -126715532 + MER45A DNA AcHobo 4 178 0 1692 175 36 47 chr2 126542832 126542970 -126713613 + MLT1A1 LTR MaLR 10 148 -217 1936 176 14 74 chr2 126542970 126543180 -126713403 - MSTD LTR MaLR 0 396 222 2264 87 13 23 chr2 126543180 126543490 -126713093 - AluSp SINE Alu -6 307 1 1936 176 14 74 chr2 126543490 126543700 -126712883 - MSTD LTR MaLR -174 222 1 1692 175 36 47 chr2 126543700 126543921 -126712662 + MLT1A1 LTR MaLR 148 365 0 26 30 0 0 chr2 126544253 126544286 -126712297 + AT_rich Low_complexity Low_complexity 1 33 0 2542 96 27 13 chr2 126544286 126544662 -126711921 - L1PB2 LINE L1 -2 6206 5826 756 164 22 9 chr2 126544664 126544890 -126711693 + CT-rich Low_complexity Low_complexity 1 229 0 1904 157 33 0 chr2 126544890 126545189 -126711394 - AluSx SINE Alu -3 309 1 14585 208 14 27 chr2 126545189 126549314 -126707269 - L1PB2 LINE L1 -368 5840 1710 2159 127 10 0 chr2 126549314 126549614 -126706969 - AluSg SINE Alu -7 303 1 14585 208 14 27 chr2 126549614 126550988 -126705595 - L1PB2 LINE L1 -4498 1710 319 11333 121 23 51 chr2 126551001 126551223 -126705360 - Tigger1 DNA MER2_type -583 1835 1608 6432 100 24 0 chr2 126551223 126552355 -126704228 - L1PA12 LINE L1 0 6168 5026 11333 121 23 51 chr2 126552355 126553267 -126703316 - Tigger1 DNA MER2_type -810 1608 774 1748 91 5 0 chr2 126553267 126553488 -126703095 + AluY SINE Alu 1 222 -89 11333 121 23 51 chr2 126553488 126554241 -126702342 - Tigger1 DNA MER2_type -1644 774 1 471 254 156 64 chr2 126556944 126557303 -126699280 + MLT1I LTR MaLR 10 401 -8 918 266 107 33 chr2 126557756 126558120 -126698463 + LTR16C LTR ERVL 101 491 0 2223 158 37 0 chr2 126558723 126559097 -126697486 - MLT1B LTR MaLR -2 388 1 919 248 191 50 chr2 126559832 126560496 -126696087 - LTR50 LTR ERVL -2 793 25 2056 193 0 8 chr2 126560496 126560858 -126695725 - MLT1A1 LTR MaLR -2 363 5 919 248 191 50 chr2 126560858 126560888 -126695695 - LTR50 LTR ERVL -770 25 1 2528 152 9 41 chr2 126561122 126561162 -126695421 - MSTB LTR MaLR 0 426 386 2056 154 0 0 chr2 126561162 126561467 -126695116 + AluSg SINE Alu 1 305 -5 2528 152 9 41 chr2 126561467 126561866 -126694717 - MSTB LTR MaLR -40 386 1 8729 182 43 6 chr2 126561866 126563457 -126693126 - MSTB-int LTR MaLR 0 1651 2 2516 162 7 23 chr2 126563458 126563891 -126692692 - MSTB LTR MaLR 0 426 1 192 97 0 0 chr2 126564657 126564688 -126691895 + (TC)n Simple_repeat Simple_repeat 2 32 0 402 206 118 10 chr2 126564847 126564949 -126691634 + MER103 DNA DNA 10 122 -44 502 294 86 15 chr2 126566292 126566489 -126690094 + MIR SINE MIR 23 233 -29 27 0 0 0 chr2 126567444 126567471 -126689112 + AT_rich Low_complexity Low_complexity 1 27 0 925 213 55 10 chr2 126567491 126567693 -126688890 + Charlie1 DNA MER1_type 7 217 -2544 648 176 92 8 chr2 126567689 126567820 -126688763 + Charlie1 DNA MER1_type 2620 2761 0 * 566 279 30 0 chr2 126568007 126568172 -126688411 + MIR SINE MIR 18 187 -75 1004 235 82 94 chr2 126568193 126568703 -126687880 + LTR33 LTR ERVL 1 504 -17 358 306 37 8 chr2 126569523 126569657 -126686926 + MIR3 SINE MIR 67 204 -4 376 200 96 30 chr2 126569831 126569966 -126686617 - MLT1L LTR MaLR -4 611 468 207 265 15 15 chr2 126570124 126570192 -126686391 - MIR SINE MIR -98 164 97 318 305 156 51 chr2 126571277 126571572 -126685011 + L2 LINE L2 2926 3251 -21 272 253 126 0 chr2 126572072 126572167 -126684416 - MIR3 SINE MIR -54 154 48 627 317 45 36 chr2 126572494 126572914 -126683669 - L1ME4a LINE L1 -195 6206 5783 301 291 18 9 chr2 126572935 126573045 -126683538 - L1ME4a LINE L1 -2699 3727 3617 2652 185 2 12 chr2 126573100 126573586 -126682997 - L1ME4a LINE L1 -5924 502 22 380 130 14 0 chr2 126573620 126573689 -126682894 + CT-rich Low_complexity Low_complexity 4 73 0 21 36 0 0 chr2 126574127 126574155 -126682428 + AT_rich Low_complexity Low_complexity 1 28 0 253 289 116 31 chr2 126574208 126574592 -126681991 - L1MC/D LINE L1 -405 5759 5482 2133 102 0 42 chr2 126574738 126575051 -126681532 + AluSx SINE Alu 1 300 -12 23657 154 56 70 chr2 126575442 126577801 -126678782 - L1MA4A LINE L1 -28 6275 3885 230 0 33 0 chr2 126577801 126577831 -126678752 + (TTA)n Simple_repeat Simple_repeat 3 33 0 12258 76 8 7 chr2 126577831 126579977 -126676606 - L1PA7 LINE L1 -18 6136 3994 229 0 83 0 chr2 126579977 126580013 -126676570 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1989 115 18 7 chr2 126580013 126580292 -126676291 - AluY SINE Alu -28 283 2 12258 76 8 7 chr2 126580292 126580527 -126676056 - L1PA7 LINE L1 -2159 3995 3738 23657 154 56 70 chr2 126580527 126584059 -126672524 - L1MA4A LINE L1 -2417 3886 413 189 0 0 0 chr2 126584059 126584080 -126672503 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 23657 154 56 70 chr2 126584080 126584477 -126672106 - L1MA4A LINE L1 -5890 413 12 2594 194 39 19 chr2 126584488 126585059 -126671524 - L1 LINE L1 -2245 4963 4382 2155 119 148 16 chr2 126585059 126585437 -126671146 + MSTA LTR MaLR 1 428 0 5300 193 32 1 chr2 126585437 126586407 -126670176 + MSTA-int LTR MaLR 1 1000 -651 704 106 9 9 chr2 126586403 126586516 -126670067 + MSTA-int LTR MaLR 1539 1651 0 * 491 151 0 0 chr2 126586516 126586589 -126669994 + MSTA LTR MaLR 1 73 -355 * 723 149 124 68 chr2 126586586 126586747 -126669836 + MSTA LTR MaLR 259 428 0 4085 188 35 68 chr2 126586747 126587876 -126668707 - L1 LINE L1 -2822 4386 3295 486 106 0 0 chr2 126587995 126588061 -126668522 - Alu SINE Alu -15 295 230 10754 222 51 25 chr2 126588062 126591077 -126665506 - L1 LINE L1 -3954 3255 19 238 343 19 19 chr2 126591238 126591343 -126665240 - MIR SINE MIR -147 115 11 188 336 84 0 chr2 126591355 126591474 -126665109 + L3 LINE CR1 1308 1436 -141 294 294 75 38 chr2 126591620 126591780 -126664803 + MIR3 SINE MIR 34 199 -9 370 272 257 23 chr2 126592284 126592630 -126663953 - L2 LINE L2 0 3313 2887 2261 140 16 56 chr2 126592709 126592826 -126663757 - L1MA7 LINE L1 -399 5892 5772 2189 119 3 3 chr2 126592826 126593128 -126663455 - AluSg SINE Alu -8 302 1 2261 140 16 56 chr2 126593128 126593438 -126663145 - L1MA7 LINE L1 -519 5772 5482 1109 252 138 16 chr2 126593443 126594214 -126662369 - L2 LINE L2 -13 3300 2434 305 223 29 19 chr2 126594279 126594382 -126662201 - L2 LINE L2 -1060 2254 2151 1119 184 109 14 chr2 126595506 126595789 -126660794 + MER33 DNA MER1_type 1 310 -14 654 138 26 2 chr2 126595960 126596077 -126660506 - MSTD LTR MaLR -236 129 1 1493 189 66 7 chr2 126596095 126596381 -126660202 + MLT1A1 LTR MaLR 1 303 -62 449 261 73 50 chr2 126597353 126597571 -126659012 - L2 LINE L2 -10 3303 3081 2332 108 0 19 chr2 126598493 126598807 -126657776 - AluSg SINE Alu -2 308 1 1139 221 11 0 chr2 126600910 126601177 -126655406 - L1MA9 LINE L1 -47 6265 5996 205 218 164 0 chr2 126604785 126604840 -126651743 + L2 LINE L2 2571 2634 -680 476 200 8 0 chr2 126605508 126605628 -126650955 + GA-rich Low_complexity Low_complexity 2 122 0 180 317 137 14 chr2 126605923 126606207 -126650376 + L2 LINE L2 33 351 -2963 227 245 64 75 chr2 126606375 126606469 -126650114 + L2 LINE L2 1100 1192 -2122 2273 286 148 24 chr2 126606505 126608180 -126648403 + L2 LINE L2 1314 3189 -124 2248 79 7 0 chr2 126610093 126610384 -126646199 - AluY SINE Alu -18 293 1 355 288 56 19 chr2 126610554 126610714 -126645869 + MIR SINE MIR 20 185 -77 208 275 25 12 chr2 126610743 126610823 -126645760 - MIR SINE MIR -73 135 55 784 169 25 30 chr2 126610904 126611105 -126645478 + Charlie5 DNA MER1_type 2423 2622 0 365 283 88 0 chr2 126611678 126611791 -126644792 - L2 LINE L2 -5 3308 3186 360 246 55 18 chr2 126611799 126611909 -126644674 - MLT1L LTR MaLR -5 610 497 294 164 0 0 chr2 126612183 126612238 -126644345 + (TTAGGG)n Simple_repeat Simple_repeat 4 58 0 204 292 77 23 chr2 126613171 126613301 -126643282 + L2 LINE L2 2316 2452 -862 407 353 35 12 chr2 126613633 126613666 -126642917 - MIR SINE MIR -22 240 209 1964 110 13 13 chr2 126613666 126613976 -126642607 - AluSq SINE Alu 0 313 4 407 353 35 12 chr2 126613976 126614115 -126642468 - MIR SINE MIR -53 209 64 4141 60 21 9 chr2 126615377 126615912 -126640671 + L1PA7 LINE L1 5614 6154 0 2089 121 0 16 chr2 126616267 126616573 -126640010 - AluSp SINE Alu -12 301 1 212 86 29 0 chr2 126616632 126616667 -126639916 + (TAA)n Simple_repeat Simple_repeat 2 37 0 674 221 8 0 chr2 126616671 126616802 -126639781 + FLAM_A SINE Alu 1 132 -1 710 287 48 0 chr2 126617225 126617434 -126639149 + MIR SINE MIR 44 262 0 211 244 90 51 chr2 126617977 126618055 -126638528 + MIR SINE MIR 91 171 -91 2911 147 11 0 chr2 126618984 126619446 -126637137 + MLT1C LTR MaLR 1 467 0 2305 182 29 0 chr2 126619446 126620020 -126636563 + MLT1C-int LTR MaLR 1 709 -662 350 149 14 68 chr2 126620014 126620088 -126636495 + MLT1C-int LTR MaLR 827 896 -475 * 3312 253 67 58 chr2 126620303 126621514 -126635069 + MER89-int LTR ERV1 146 1367 -5434 2854 90 80 0 chr2 126622235 126622712 -126633871 + L1PBa LINE L1 2478 2992 -3870 441 272 219 18 chr2 126623382 126623606 -126632977 + MLT1K LTR MaLR 231 499 -89 194 180 20 60 chr2 126624289 126624339 -126632244 + L2 LINE L2 3187 3234 -38 371 305 113 59 chr2 126624648 126624904 -126631679 + L2 LINE L2 3002 3271 -1 474 306 82 41 chr2 126626068 126626336 -126630247 + L2 LINE L2 1994 2272 -1042 1373 202 19 6 chr2 126626336 126626653 -126629930 + MER33 DNA MER1_type 4 324 0 377 192 10 29 chr2 126626691 126626795 -126629788 + MER33 DNA MER1_type 262 363 0 666 302 172 22 chr2 126626893 126627698 -126628885 + L2 LINE L2 2397 3313 0 2529 129 11 0 chr2 126627808 126628179 -126628404 - THE1C LTR MaLR 0 375 1 218 222 0 19 chr2 126629148 126629202 -126627381 - L2 LINE L2 -2 3311 3259 207 362 95 9 chr2 126629506 126629622 -126626961 + L3 LINE CR1 260 385 -1192 1212 224 61 21 chr2 126629852 126630182 -126626401 - MER2 DNA MER2_type 0 344 2 1581 164 57 88 chr2 126630657 126631041 -126625542 - MLT1A2 LTR MaLR 0 374 3 508 326 174 28 chr2 126631244 126631783 -126624800 + L2 LINE L2 550 1167 -2147 670 222 49 32 chr2 126633139 126633324 -126623259 + MIR SINE MIR 50 237 -25 720 284 100 7 chr2 126633324 126633800 -126622783 + LTR50 LTR ERVL 1 663 -132 2523 149 159 10 chr2 126633800 126634283 -126622300 + MER68 LTR ERV1 1 555 -7 267 182 26 65 chr2 126634323 126634400 -126622183 + LTR33A LTR ERVL 455 515 -8 1803 78 4 0 chr2 126634431 126634661 -126621922 + AluSp SINE Alu 1 231 -82 280 124 15 47 chr2 126634694 126634762 -126621821 + AluSp SINE Alu 234 277 -26 1211 323 68 56 chr2 126635255 126635382 -126621201 + ERVL LTR ERVL 785 909 -4855 2372 210 14 14 chr2 126635382 126635887 -126620696 + MLT1D LTR MaLR 1 505 0 1211 323 68 56 chr2 126635887 126636776 -126619807 + ERVL LTR ERVL 909 1813 -3951 327 298 34 80 chr2 126636744 126636982 -126619601 + ERVL LTR ERVL 1753 1979 -3017 * 697 252 31 59 chr2 126636994 126637216 -126619367 + ERVL LTR ERVL 2115 2330 -3434 765 234 102 21 chr2 126637397 126637632 -126618951 + MIR SINE MIR 8 261 -1 282 283 150 0 chr2 126638122 126638235 -126618348 - MIR SINE MIR -8 254 125 636 302 72 22 chr2 126638276 126638498 -126618085 - MIR SINE MIR -9 253 21 259 305 105 0 chr2 126639171 126639266 -126617317 + L2 LINE L2 3151 3255 -17 299 250 16 0 chr2 126640109 126640173 -126616410 + MIR3 SINE MIR 115 179 -29 1118 206 28 5 chr2 126640742 126640960 -126615623 - MER58A DNA MER1_type 0 224 2 343 318 144 0 chr2 126641410 126641583 -126615000 + MIR3 SINE MIR 9 206 -2 390 333 53 8 chr2 126641857 126641989 -126614594 + L2 LINE L2 3127 3264 -8 246 252 108 18 chr2 126642216 126642327 -126614256 - MIR SINE MIR -13 249 129 578 337 74 31 chr2 126643536 126643954 -126612629 + L2 LINE L2 2836 3271 -1 317 285 80 22 chr2 126644127 126644264 -126612319 + L1MC4a LINE L1 6044 6188 -1620 273 344 76 8 chr2 126644314 126644445 -126612138 + MIR SINE MIR 33 172 -90 1523 213 86 12 chr2 126644589 126645078 -126611505 + MER90 LTR ERV1 90 614 0 294 290 11 21 chr2 126645078 126645171 -126611412 + MIR SINE MIR 170 261 -1 2597 206 12 52 chr2 126645350 126645927 -126610656 - MLT2B3 LTR ERVL 0 554 1 421 199 199 0 chr2 126646475 126646611 -126609972 + L1ME4a LINE L1 5957 6119 -2 208 274 115 26 chr2 126647735 126647848 -126608735 - L2 LINE L2 0 3313 3191 23 0 0 0 chr2 126648245 126648268 -126608315 + AT_rich Low_complexity Low_complexity 1 23 0 768 278 10 15 chr2 126648802 126649007 -126607576 - MIR SINE MIR -29 233 30 240 196 22 0 chr2 126649147 126649193 -126607390 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 204 328 133 16 chr2 126649237 126649365 -126607218 + MIR SINE MIR 12 154 -108 26 0 0 0 chr2 126649375 126649401 -126607182 + AT_rich Low_complexity Low_complexity 1 26 0 246 108 27 135 chr2 126649401 126649449 -126607134 - L1MA8 LINE L1 -4 6287 6248 2184 106 0 10 chr2 126649449 126649761 -126606822 - AluSq SINE Alu -4 309 1 246 108 27 135 chr2 126649761 126649786 -126606797 - L1MA8 LINE L1 -43 6248 6222 640 270 94 76 chr2 126650098 126650479 -126606104 - MLT1I LTR MaLR 0 409 22 456 259 46 6 chr2 126651124 126651269 -126605314 + MIR SINE MIR 112 262 0 1921 117 47 0 chr2 126651384 126651682 -126604901 + AluSx SINE Alu 1 312 0 272 326 38 8 chr2 126652465 126652597 -126603986 - MIR SINE MIR 0 262 127 410 237 172 47 chr2 126652620 126652789 -126603794 - L2 LINE L2 -75 3197 3008 351 276 162 33 chr2 126653004 126653461 -126603122 - L2 LINE L2 -360 2954 2439 207 286 0 65 chr2 126654772 126654849 -126601734 - MIR SINE MIR -93 169 98 368 338 26 13 chr2 126655117 126655268 -126601315 + MIR SINE MIR 94 246 -16 821 201 101 0 chr2 126656223 126656392 -126600191 - MER5A DNA MER1_type -3 186 1 483 291 8 0 chr2 126657099 126657216 -126599367 + MIR SINE MIR 118 235 -27 382 268 111 42 chr2 126657939 126658129 -126598454 - MIR SINE MIR -6 256 54 300 127 0 0 chr2 126658925 126658980 -126597603 + (TG)n Simple_repeat Simple_repeat 1 55 0 335 176 0 0 chr2 126658980 126659031 -126597552 + L1MC4 LINE L1 6653 6703 -1339 14851 52 1 22 chr2 126660583 126663274 -126593309 - L1PA5 LINE L1 0 6154 3499 1291 189 37 4 chr2 126663783 126664027 -126592556 - L1MC1 LINE L1 -13 6320 6069 476 76 51 32 chr2 126664027 126664184 -126592399 + (TA)n Simple_repeat Simple_repeat 1 160 0 445 135 77 19 chr2 126664198 126664354 -126592229 + (TATAA)n Simple_repeat Simple_repeat 5 169 0 707 60 11 60 chr2 126664360 126664545 -126592038 + (TA)n Simple_repeat Simple_repeat 2 177 0 285 115 54 31 chr2 126664565 126664695 -126591888 + (TTATA)n Simple_repeat Simple_repeat 5 137 0 197 157 78 0 chr2 126664699 126664750 -126591833 + MIR SINE MIR 129 183 -79 226 337 20 10 chr2 126665141 126665239 -126591344 - L2 LINE L2 -31 3282 3184 1221 317 95 21 chr2 126666404 126667305 -126589278 - L2 LINE L2 -613 2701 1734 362 287 62 31 chr2 126667778 126667907 -126588676 - MIR SINE MIR -82 180 48 1260 168 13 0 chr2 126670920 126671146 -126585437 + MLT2B1 LTR ERVL 1 229 -291 780 247 101 50 chr2 126671175 126671324 -126585259 + MLT1A1 LTR MaLR 5 145 -229 2219 130 3 0 chr2 126671324 126671632 -126584951 + AluSg SINE Alu 1 309 -1 780 247 101 50 chr2 126671632 126671913 -126584670 + MLT1A1 LTR MaLR 145 372 -2 353 293 45 38 chr2 126672066 126672199 -126584384 + L2 LINE L2 3139 3272 0 209 250 0 0 chr2 126672591 126672639 -126583944 + L2 LINE L2 3225 3272 0 437 342 52 10 chr2 126672806 126672999 -126583584 - MIR SINE MIR -39 223 23 348 360 9 0 chr2 126673712 126673826 -126582757 - L3 LINE CR1 -23 1554 1440 729 61 0 0 chr2 126674275 126674374 -126582209 + (TCCA)n Simple_repeat Simple_repeat 2 100 0 1040 168 0 0 chr2 126675092 126675253 -126581330 - Tigger2 DNA MER2_type -5 2713 2553 * 1159 161 0 0 chr2 126675237 126675429 -126581154 - Tigger2 DNA MER2_type -2524 194 3 3445 311 56 25 chr2 126675469 126676961 -126579622 - ERVL LTR ERVL -394 5370 3833 337 308 204 13 chr2 126676990 126677298 -126579285 + ERVL LTR ERVL 503 869 -4785 3857 132 38 58 chr2 126677684 126678389 -126578194 - LTR8 LTR ERV1 0 691 1 774 303 109 59 chr2 126679918 126680430 -126576153 - MLT1K LTR MaLR -11 577 40 349 268 78 42 chr2 126680540 126680682 -126575901 + MER117 DNA MER1_type 51 197 0 216 200 22 0 chr2 126684213 126684258 -126572325 + GA-rich Low_complexity Low_complexity 2 47 0 194 307 53 0 chr2 126685149 126685224 -126571359 + MIR SINE MIR 63 141 -121 21 82 0 0 chr2 126686124 126686173 -126570410 + AT_rich Low_complexity Low_complexity 1 49 0 421 346 75 13 chr2 126686189 126686417 -126570166 - MIR SINE MIR -1 261 20 282 143 0 0 chr2 126687002 126687051 -126569532 + (TTC)n Simple_repeat Simple_repeat 3 51 0 2029 130 3 35 chr2 126687053 126687369 -126569214 - AluSc SINE Alu -3 306 1 336 291 133 12 chr2 126687705 126687870 -126568713 + MIR SINE MIR 40 224 -38 203 309 49 25 chr2 126688682 126688763 -126567820 - L3b LINE CR1 -93 1490 1408 2184 130 39 33 chr2 126689556 126689918 -126566665 + THE1B LTR MaLR 1 364 0 337 331 94 32 chr2 126689994 126690366 -126566217 - MLT1L LTR MaLR -2 613 219 196 286 0 39 chr2 126691615 126691692 -126564891 + MIR SINE MIR 81 154 -108 1634 227 21 24 chr2 126691697 126692072 -126564511 - MLT1A2 LTR MaLR 0 374 1 1497 185 51 20 chr2 126692173 126692525 -126564058 + MLT1A1 LTR MaLR 3 365 0 192 353 43 0 chr2 126692819 126692935 -126563648 - MIR SINE MIR -48 214 94 410 280 43 39 chr2 126693536 126693793 -126562790 + MLT1H LTR MaLR 84 341 -208 214 207 52 17 chr2 126694553 126694611 -126561972 - MIR SINE MIR -89 119 60 313 232 53 42 chr2 126694661 126694756 -126561827 - MIR SINE MIR -62 200 105 368 208 14 125 chr2 126694993 126695049 -126561534 + Charlie8 DNA MER1_type 40 101 -2316 2585 61 0 10 chr2 126695049 126695360 -126561223 + AluY SINE Alu 1 308 -3 368 208 14 125 chr2 126695360 126695447 -126561136 + Charlie8 DNA MER1_type 101 167 -2250 207 236 0 18 chr2 126695942 126695997 -126560586 + (TAA)n Simple_repeat Simple_repeat 1 54 0 231 224 0 0 chr2 126696491 126696544 -126560039 + CT-rich Low_complexity Low_complexity 3 56 0 2270 120 35 16 chr2 126696544 126696910 -126559673 + THE1C LTR MaLR 3 375 0 372 316 128 0 chr2 126697281 126697477 -126559106 + MIR SINE MIR 30 250 -12 235 161 36 18 chr2 126698183 126698239 -126558344 + (CAAA)n Simple_repeat Simple_repeat 1 57 0 489 14 0 41 chr2 126698485 126698558 -126558025 + (TG)n Simple_repeat Simple_repeat 1 70 0 878 213 71 1 chr2 126699332 126699597 -126556986 + MER45B DNA AcHobo 1 318 -722 1466 172 15 0 chr2 126699620 126699888 -126556695 + MER45B DNA AcHobo 606 877 -163 729 100 0 0 chr2 126700472 126700572 -126556011 - AluSg SINE Alu -7 305 206 1263 103 0 0 chr2 126700572 126700728 -126555855 - AluSg SINE Alu -154 156 1 433 281 51 28 chr2 126700733 126700911 -126555672 + MER5A DNA MER1_type 1 182 -7 186 171 0 0 chr2 126701263 126701304 -126555279 + (TTCA)n Simple_repeat Simple_repeat 1 41 0 218 296 80 24 chr2 126701582 126701707 -126554876 - L2 LINE L2 -225 3047 2916 2238 117 0 0 chr2 126701964 126702254 -126554329 + AluSg SINE Alu 1 290 -20 273 316 86 34 chr2 126702368 126702602 -126553981 - L2 LINE L2 -842 2472 2227 338 281 105 59 chr2 126703169 126703407 -126553176 + MIR SINE MIR 2 250 -12 390 376 28 5 chr2 126704129 126704342 -126552241 - MIR SINE MIR -17 245 28 231 329 95 0 chr2 126705637 126705774 -126550809 - MIR SINE MIR -45 217 68 317 294 40 55 chr2 126705982 126706183 -126550400 + MIR SINE MIR 53 250 -12 413 216 78 10 chr2 126707306 126707408 -126549175 - MER49 LTR ERV1 -242 681 573 308 251 93 120 chr2 126707478 126707769 -126548814 - MER72 LTR ERV1 -429 293 11 304 253 0 74 chr2 126707775 126707870 -126548713 - MIR SINE MIR -124 138 51 685 255 54 107 chr2 126708265 126708534 -126548049 - L2 LINE L2 -98 3215 2933 2297 142 86 15 chr2 126708534 126708943 -126547640 + L1MA7 LINE L1 5849 6286 -5 685 255 54 107 chr2 126708943 126709324 -126547259 - L2 LINE L2 -380 2933 2602 529 212 8 168 chr2 126709489 126709739 -126546844 + MIR SINE MIR 51 260 -2 416 383 1 11 chr2 126710679 126710880 -126545703 + MIR SINE MIR 32 230 -32 258 190 82 99 chr2 126711552 126711736 -126544847 + MLT1J2 LTR MaLR 123 322 -124 226 171 24 0 chr2 126711791 126711832 -126544751 + MLT1J2 LTR MaLR 409 450 0 2723 253 36 20 chr2 126712684 126713431 -126543152 + MER89-int LTR ERV1 1800 2558 -4243 1392 234 27 7 chr2 126713849 126714144 -126542439 + MER89-int LTR ERV1 3428 3728 -3073 284 253 40 13 chr2 126714184 126714259 -126542324 - MER2 DNA MER2_type 0 345 269 642 167 0 0 chr2 126714420 126714522 -126542061 - MER2 DNA MER2_type -191 154 53 363 265 69 20 chr2 126714605 126714707 -126541876 + MLT1A1 LTR MaLR 164 270 -95 216 284 0 54 chr2 126715384 126715458 -126541125 + L2 LINE L2 3239 3308 -5 263 369 101 0 chr2 126715744 126715893 -126540690 + MIR3 SINE MIR 30 193 -15 309 346 33 33 chr2 126716246 126716399 -126540184 + MIR SINE MIR 48 200 -62 2301 91 6 25 chr2 126716508 126716826 -126539757 - AluSq SINE Alu -1 312 1 359 308 92 30 chr2 126719263 126719490 -126537093 + MIR SINE MIR 15 259 -3 21 36 0 0 chr2 126721027 126721055 -126535528 + AT_rich Low_complexity Low_complexity 1 28 0 919 201 93 0 chr2 126721635 126721839 -126534744 + MER58A DNA MER1_type 2 224 0 931 200 103 0 chr2 126721858 126722053 -126534530 + MER8 DNA MER2_type 24 238 -1 514 176 49 0 chr2 126722076 126722178 -126534405 - L1ME3A LINE L1 -31 6208 6102 506 312 96 20 chr2 126722218 126722616 -126533967 - L1ME3A LINE L1 -2006 5871 5444 936 300 97 51 chr2 126722798 126722931 -126533652 - L1MEc LINE L1 -2744 3471 3345 7787 19 0 0 chr2 126722931 126723941 -126532642 - L1PA2 LINE L1 0 6155 5146 936 300 97 51 chr2 126723941 126725211 -126531372 - L1MEc LINE L1 -2870 3345 2036 329 364 68 0 chr2 126725427 126725589 -126530994 - HAL1 LINE L1 -80 2427 2255 251 239 49 18 chr2 126725721 126725884 -126530699 + (TA)n Simple_repeat Simple_repeat 1 168 0 1048 186 80 45 chr2 126725915 126726129 -126530454 - L1MB7 LINE L1 -42 6142 5916 1823 115 4 0 chr2 126726129 126726381 -126530202 + AluSp SINE Alu 50 302 -11 1048 186 80 45 chr2 126726381 126726430 -126530153 - L1MB7 LINE L1 -268 5916 5870 * 1291 177 28 4 chr2 126726424 126726672 -126529911 + L1MB5 LINE L1 5611 5864 -310 252 119 95 0 chr2 126727471 126727513 -126529070 + L1M4 LINE L1 5746 5791 -383 524 159 30 30 chr2 126727528 126727660 -126528923 - L1MC1 LINE L1 -2 6331 6200 232 186 0 71 chr2 126727663 126727733 -126528850 + L1MA5A LINE L1 6228 6292 -5 4994 131 21 12 chr2 126727765 126728581 -126528002 - L1MC1 LINE L1 -150 6183 5361 207 69 0 0 chr2 126728717 126728746 -126527837 + (TTTTTA)n Simple_repeat Simple_repeat 3 31 0 213 431 0 8 chr2 126730071 126730201 -126526382 + MIR3 SINE MIR 3 131 -77 237 263 35 0 chr2 126730304 126730361 -126526222 - L2 LINE L2 -2 3311 3253 322 343 71 7 chr2 126731360 126731500 -126525083 - L2 LINE L2 -5 3267 3119 * 575 316 19 5 chr2 126731488 126731700 -126524883 - L2 LINE L2 -2295 1019 805 290 183 61 37 chr2 126731703 126731785 -126524798 + MER112 DNA MER1_type 1 84 -176 189 312 0 0 chr2 126731855 126731932 -126524651 + (CATATA)n Simple_repeat Simple_repeat 2 78 0 240 247 0 45 chr2 126731959 126732048 -126524535 + L1MC4 LINE L1 6614 6698 -1344 339 271 47 0 chr2 126732160 126732245 -126524338 - L1MC4 LINE L1 -1339 6703 6615 321 278 0 22 chr2 126732257 126732347 -126524236 - L1MC4 LINE L1 -1340 6702 6615 324 242 22 44 chr2 126732375 126732466 -126524117 - L1MC4 LINE L1 -1340 6702 6614 343 272 0 22 chr2 126732484 126732576 -126524007 - L1MC4 LINE L1 -1339 6703 6614 300 330 17 17 chr2 126732586 126732704 -126523879 - L1MC4 LINE L1 -1339 6703 6586 219 188 0 0 chr2 126732706 126732754 -126523829 + (CATATA)n Simple_repeat Simple_repeat 2 49 0 322 210 0 110 chr2 126732754 126732854 -126523729 - L1MC4 LINE L1 -1339 6703 6615 209 235 0 12 chr2 126732855 126732936 -126523647 + (TA)n Simple_repeat Simple_repeat 2 81 0 310 269 0 43 chr2 126732945 126733038 -126523545 - L1MC4 LINE L1 -1340 6702 6614 207 247 0 0 chr2 126733041 126733114 -126523469 + (TA)n Simple_repeat Simple_repeat 2 74 0 318 283 0 22 chr2 126733122 126733214 -126523369 - L1MC4 LINE L1 -1339 6703 6614 270 239 0 0 chr2 126733221 126733313 -126523270 + (TA)n Simple_repeat Simple_repeat 1 92 0 234 202 21 64 chr2 126733318 126733412 -126523171 - L1MC4 LINE L1 -1339 6703 6614 233 270 0 0 chr2 126733413 126733476 -126523107 + (CATATA)n Simple_repeat Simple_repeat 5 67 0 323 267 23 0 chr2 126733477 126733563 -126523020 - L1MC4 LINE L1 -1340 6702 6615 306 194 0 0 chr2 126733565 126733637 -126522946 + (TA)n Simple_repeat Simple_repeat 1 72 0 402 254 130 12 chr2 126733643 126733812 -126522771 + MER112 DNA MER1_type 66 254 -6 960 302 116 32 chr2 126733812 126734470 -126522113 - L2 LINE L2 -2523 791 79 2318 50 33 26 chr2 126735370 126735672 -126520911 + AluY SINE Alu 1 304 -7 198 262 0 0 chr2 126735913 126735955 -126520628 + MIR SINE MIR 110 151 -57 2469 65 0 0 chr2 126736369 126736676 -126519907 - AluY SINE Alu -4 307 1 339 292 25 17 chr2 126737286 126737406 -126519177 + MIR SINE MIR 137 257 -5 437 284 218 18 chr2 126737531 126737925 -126518658 - L1MC4 LINE L1 -19 8023 7551 1159 286 71 14 chr2 126737959 126738469 -126518114 - L1MC4a LINE L1 -1740 6068 5530 2299 114 0 0 chr2 126738804 126739101 -126517482 + AluSg SINE Alu 7 303 -7 252 293 117 99 chr2 126739548 126739900 -126516683 - L2 LINE L2 -1 3271 2914 24 0 0 0 chr2 126740470 126740494 -126516089 + AT_rich Low_complexity Low_complexity 1 24 0 1589 57 31 0 chr2 126740744 126740971 -126515612 - L1PA4 LINE L1 -3 6152 5919 450 282 135 43 chr2 126742462 126743788 -126512795 - L1M4 LINE L1 -2508 3638 2191 3978 148 38 72 chr2 126743810 126744482 -126512101 - L1MB4 LINE L1 0 6180 5487 1804 169 6 20 chr2 126744482 126744826 -126511757 - MER44D DNA MER2_type 0 609 1 3978 148 38 72 chr2 126744826 126745024 -126511559 - L1MB4 LINE L1 -693 5487 5331 2146 147 39 22 chr2 126745024 126745171 -126511412 + L1MA4 LINE L1 5882 6025 -275 3499 129 19 6 chr2 126745171 126745691 -126510892 + MER1A DNA MER1_type 1 527 0 2146 147 39 22 chr2 126745691 126745950 -126510633 + L1MA4 LINE L1 6025 6295 -5 3978 148 38 72 chr2 126745950 126746181 -126510402 - L1MB4 LINE L1 -849 5331 5094 564 226 90 73 chr2 126746304 126746538 -126510045 + L1 LINE L1 4790 5027 -1119 334 283 126 51 chr2 126746905 126747340 -126509243 - HAL1 LINE L1 -785 1722 1255 191 146 24 0 chr2 126747381 126747422 -126509161 + CT-rich Low_complexity Low_complexity 2 43 0 2434 80 0 0 chr2 126747426 126747726 -126508857 - AluSc SINE Alu -9 300 1 27 29 0 0 chr2 126747859 126747893 -126508690 + AT_rich Low_complexity Low_complexity 1 34 0 435 275 29 62 chr2 126748085 126748361 -126508222 - L1ME3A LINE L1 -225 5945 5679 319 273 43 56 chr2 126748358 126748754 -126507829 - L1ME3A LINE L1 -848 5298 4908 * 1096 43 50 0 chr2 126748957 126749097 -126507486 + L1PB1 LINE L1 6004 6150 -1 198 71 0 0 chr2 126749105 126749133 -126507450 + (TAAAAA)n Simple_repeat Simple_repeat 2 29 0 26 0 0 0 chr2 126749363 126749389 -126507194 + AT_rich Low_complexity Low_complexity 1 26 0 2185 113 10 0 chr2 126750264 126750564 -126506019 - AluSq SINE Alu -10 303 1 282 349 48 16 chr2 126750623 126750749 -126505834 + MIR SINE MIR 30 159 -103 31 44 0 0 chr2 126750836 126750881 -126505702 + AT_rich Low_complexity Low_complexity 1 45 0 303 268 276 0 chr2 126750994 126751121 -126505462 + MER5A DNA MER1_type 21 182 -7 199 337 74 0 chr2 126752280 126752375 -126504208 - L2 LINE L2 -281 2991 2890 670 288 8 68 chr2 126752401 126752665 -126503918 + MER112 DNA MER1_type 1 248 -12 274 334 54 29 chr2 126752954 126753128 -126503455 - MIR SINE MIR -66 142 17 234 216 0 0 chr2 126753655 126753706 -126502877 - L2 LINE L2 -1 3312 3262 463 262 49 70 chr2 126754454 126754740 -126501843 - HAL1 LINE L1 0 2507 2228 325 260 138 8 chr2 126754793 126754916 -126501667 - L2 LINE L2 -426 2888 2750 1215 281 68 69 chr2 126754919 126755685 -126500898 - L2 LINE L2 -737 2577 1813 585 324 85 45 chr2 126755747 126756226 -126500357 - L2 LINE L2 -205 3067 2563 444 300 88 0 chr2 126757896 126758056 -126498527 - MIR SINE MIR -15 247 74 359 232 23 96 chr2 126758230 126758407 -126498176 - L1MC5 LINE L1 -180 7781 7618 14337 204 19 19 chr2 126758470 126760434 -126496149 + L1P4 LINE L1 1838 3801 -3802 328 152 30 45 chr2 126760434 126760500 -126496083 - Alu SINE Alu -5 297 241 14337 204 19 19 chr2 126760500 126762427 -126494156 + L1P4 LINE L1 3801 5727 -1876 2363 108 60 23 chr2 126762427 126762778 -126493805 - THE1B LTR MaLR 0 364 1 14337 204 19 19 chr2 126762778 126764156 -126492427 + L1P4 LINE L1 5727 7120 -483 1845 168 0 7 chr2 126764156 126764459 -126492124 + AluSx SINE Alu 1 301 -11 14337 204 19 19 chr2 126764459 126764554 -126492029 + L1P4 LINE L1 7120 7214 -389 4173 118 56 15 chr2 126764761 126765029 -126491554 + L1PA15 LINE L1 5382 5637 -528 1626 177 10 10 chr2 126765029 126765329 -126491254 + AluSx SINE Alu 2 301 -11 4173 118 56 15 chr2 126765329 126765813 -126490770 + L1PA15 LINE L1 5637 6165 0 442 285 14 49 chr2 126765823 126766107 -126490476 - L1MC5 LINE L1 -417 7544 7271 760 224 25 37 chr2 126766211 126766466 -126490117 - L1MC4 LINE L1 -738 7223 7000 3048 116 13 22 chr2 126768441 126768890 -126487693 - MER65A LTR ERV1 0 445 1 255 286 153 15 chr2 126769394 126769590 -126486993 + L2 LINE L2 2709 2931 -383 470 193 3 6 chr2 126769718 126769815 -126486768 - L1MC2 LINE L1 -67 7718 6166 222 37 0 0 chr2 126769815 126769842 -126486741 + (ATG)n Simple_repeat Simple_repeat 2 28 0 1188 185 16 118 chr2 126769850 126770164 -126486419 - AluJo SINE Alu -30 282 1 4683 146 44 38 chr2 126770164 126770540 -126486043 - L1MC2 LINE L1 -174 6170 5798 2237 86 3 3 chr2 126770540 126770832 -126485751 - AluY SINE Alu -19 292 1 4683 146 44 38 chr2 126770832 126771413 -126485170 - L1MC2 LINE L1 -546 5798 5207 2158 86 3 40 chr2 126771440 126771742 -126484841 + AluY SINE Alu 1 291 -20 4280 70 2 0 chr2 126771744 126772256 -126484327 + L1PA5 LINE L1 5629 6141 -13 550 88 0 0 chr2 126772342 126772422 -126484161 + AluSc SINE Alu 230 309 0 1638 151 90 25 chr2 126772430 126772795 -126483788 + L1MC2 LINE L1 5782 6170 -174 945 173 30 18 chr2 126772795 126772963 -126483620 + AluJo SINE Alu 1 170 -142 745 226 14 27 chr2 126772963 126773109 -126483474 + AluJo/FRAM SINE Alu 139 282 -30 270 0 0 0 chr2 126773117 126773147 -126483436 + (CAT)n Simple_repeat Simple_repeat 2 31 0 493 175 103 0 chr2 126773147 126773244 -126483339 + L1MC2 LINE L1 6166 6272 -72 251 291 153 15 chr2 126773372 126773568 -126483015 - L2 LINE L2 -383 2931 2709 234 0 0 0 chr2 126773962 126773988 -126482595 + (CA)n Simple_repeat Simple_repeat 2 27 0 255 187 11 0 chr2 126775544 126775623 -126480960 + Alu SINE Alu 246 292 -9 202 200 0 0 chr2 126775647 126775682 -126480901 + CT-rich Low_complexity Low_complexity 6 40 0 285 307 63 16 chr2 126775918 126776045 -126480538 - L2 LINE L2 0 3272 3140 189 74 0 0 chr2 126776188 126776215 -126480368 + (TTAA)n Simple_repeat Simple_repeat 3 29 0 687 281 165 16 chr2 126776269 126776617 -126479966 - L2 LINE L2 -163 3150 2763 786 298 166 9 chr2 126776620 126777204 -126479379 - L2 LINE L2 -669 2645 1970 1185 176 23 14 chr2 126777394 126777610 -126478973 - MLT1A1 LTR MaLR -4 361 144 793 228 13 0 chr2 126777883 126778041 -126478542 - MLT1A1 LTR MaLR -205 160 1 375 283 175 0 chr2 126778576 126778696 -126477887 + Charlie8 DNA MER1_type 21 161 -2256 25 31 0 0 chr2 126778935 126778967 -126477616 + AT_rich Low_complexity Low_complexity 1 32 0 1010 196 72 98 chr2 126779151 126779538 -126477045 + MER34B LTR ERV1 5 381 -184 1528 0 0 0 chr2 126779582 126779741 -126476842 - L1PA3 LINE L1 0 6155 5997 310 205 24 12 chr2 126779808 126779891 -126476692 + MER34 LTR ERV1 459 542 0 1202 148 6 0 chr2 126780389 126780571 -126476012 - MER105 DNA DNA -7 197 15 449 243 88 7 chr2 126781005 126781141 -126475442 - MIR SINE MIR -65 197 51 231 114 0 0 chr2 126781915 126781959 -126474624 + (TC)n Simple_repeat Simple_repeat 1 44 0 305 186 29 14 chr2 126782010 126782080 -126474503 + LTR16A1 LTR ERVL 387 457 0 225 294 82 62 chr2 126782161 126782355 -126474228 + MIR SINE MIR 20 217 -45 195 330 5 95 chr2 126783203 126783424 -126473159 + L2 LINE L2 2899 3099 -173 1949 144 10 0 chr2 126783512 126783804 -126472779 + AluJb SINE Alu 1 295 -17 197 250 0 0 chr2 126783829 126783873 -126472710 + MIR SINE MIR 217 260 -2 206 274 20 0 chr2 126783896 126783947 -126472636 - L2 LINE L2 -16 3297 3246 556 154 19 10 chr2 126784023 126784127 -126472456 + L2 LINE L2 3209 3313 0 183 373 0 15 chr2 126786057 126786124 -126470459 - MIR SINE MIR -180 82 17 362 153 28 28 chr2 126786655 126786727 -126469856 + MIR SINE MIR 83 154 -108 843 264 15 5 chr2 126786913 126787114 -126469469 + MER20 DNA MER1_type 1 203 -16 213 39 0 0 chr2 126787521 126787547 -126469036 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 230 138 17 0 chr2 126788477 126788535 -126468048 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 450 316 47 21 chr2 126788659 126788849 -126467734 + MIR SINE MIR 47 241 -21 478 296 14 7 chr2 126789350 126789492 -126467091 + MIR SINE MIR 65 207 -55 22 35 0 0 chr2 126789794 126789823 -126466760 + AT_rich Low_complexity Low_complexity 1 29 0 197 319 106 11 chr2 126790504 126790598 -126465985 - L2 LINE L2 0 3272 3170 846 134 0 22 chr2 126790764 126790898 -126465685 + FLAM_C SINE Alu 3 133 0 300 267 93 0 chr2 126791670 126791756 -126464827 - MIR SINE MIR -122 140 47 2553 126 2 31 chr2 126791894 126792307 -126464276 - L1MA2 LINE L1 0 6304 5904 259 309 96 0 chr2 126793159 126793253 -126463330 + L2 LINE L2 2715 2817 -497 1535 206 52 43 chr2 126793546 126793915 -126462668 + MLT1A2 LTR MaLR 3 374 0 497 273 43 62 chr2 126794588 126794797 -126461786 + MLT1J2 LTR MaLR 24 228 -222 258 217 50 0 chr2 126794973 126795033 -126461550 + L2 LINE L2 3251 3313 0 309 149 0 0 chr2 126795751 126795798 -126460785 + L2 LINE L2 3262 3308 -5 2350 132 21 29 chr2 126796739 126797117 -126459466 + THE1C LTR MaLR 1 375 0 1298 160 0 0 chr2 126797298 126797504 -126459079 - AluSg/x SINE Alu -1 309 104 234 71 0 0 chr2 126797523 126797551 -126459032 + LTR45B LTR ERV1 462 489 0 411 281 110 0 chr2 126797763 126797909 -126458674 + MIR SINE MIR 34 195 -67 829 156 0 33 chr2 126799070 126799328 -126457255 + MSTC LTR MaLR 1 311 -117 728 181 161 13 chr2 126799655 126799810 -126456773 + MLT1B LTR MaLR 210 387 -3 208 239 0 0 chr2 126799938 126799984 -126456599 + (CAA)n Simple_repeat Simple_repeat 1 46 0 392 298 135 31 chr2 126800048 126800374 -126456209 - MLT1J2 LTR MaLR -27 423 64 277 321 52 60 chr2 126800487 126800621 -126455962 - MIR SINE MIR -110 152 20 300 316 0 0 chr2 126800693 126800788 -126455795 - MER103 DNA DNA 0 166 72 273 287 178 8 chr2 126801589 126801718 -126454865 - MIR SINE MIR -7 255 105 252 0 0 0 chr2 126802262 126802290 -126454293 + (TG)n Simple_repeat Simple_repeat 2 29 0 1588 190 91 52 chr2 126802418 126802860 -126453723 + MLT1C LTR MaLR 6 464 -3 303 275 12 0 chr2 126803797 126803877 -126452706 + MLT1K LTR MaLR 81 161 -427 502 232 47 138 chr2 126803987 126804370 -126452213 - L2 LINE L2 0 3313 2966 43329 35 23 4 chr2 126804626 126807130 -126449453 - L1PA2 LINE L1 -158 5997 3542 2875 10 0 0 chr2 126807130 126807439 -126449144 - AluYa5 SINE Alu -1 310 2 43329 35 23 4 chr2 126807439 126810815 -126445768 - L1PA2 LINE L1 -2613 3542 1 810 263 63 45 chr2 126810824 126811131 -126445452 - L2 LINE L2 -905 2409 2086 * 4464 241 45 37 chr2 126811130 126811793 -126444790 + L1M4 LINE L1 2406 3062 -3084 1588 183 3 51 chr2 126811793 126812104 -126444479 + AluJo SINE Alu 17 312 0 4464 241 45 37 chr2 126812104 126813970 -126442613 + L1M4 LINE L1 3062 5288 -858 1973 196 75 55 chr2 126813970 126814465 -126442118 + MLT1D LTR MaLR 1 505 0 2029 245 65 50 chr2 126814465 126815088 -126441495 + MLT1D-int LTR MaLR 1 641 -730 2324 79 0 3 chr2 126815088 126815379 -126441204 + AluY SINE Alu 1 290 -21 2029 245 65 50 chr2 126815379 126815592 -126440991 + MLT1D-int LTR MaLR 641 849 -522 226 233 0 0 chr2 126815601 126815661 -126440922 + A-rich Low_complexity Low_complexity 1 60 0 308 109 0 0 chr2 126815939 126815985 -126440598 - MADE1 DNA Mariner -34 46 1 377 266 86 46 chr2 126815985 126816165 -126440418 - MIR SINE MIR -51 157 14 284 330 44 11 chr2 126816635 126816726 -126439857 + MIR SINE MIR 5 98 -164 401 282 94 39 chr2 126817589 126817770 -126438813 - MIR SINE MIR -8 254 64 286 258 11 11 chr2 126817939 126818032 -126438551 + CT-rich Low_complexity Low_complexity 3 95 0 2222 74 11 14 chr2 126818581 126818887 -126437696 + AluSc SINE Alu 5 309 0 307 308 26 42 chr2 126819765 126819907 -126436676 + MIR SINE MIR 19 161 -47 265 54 0 0 chr2 126822528 126822565 -126434018 - L1MA8 LINE L1 -188 6103 6067 424 290 55 30 chr2 126823179 126823379 -126433204 - MIR SINE MIR -56 206 2 2045 262 125 55 chr2 126823822 126824197 -126432386 - L2 LINE L2 -1 3312 2965 1695 193 25 19 chr2 126824197 126824560 -126432023 - MLT1A1 LTR MaLR 0 365 1 2045 262 125 55 chr2 126824560 126825528 -126431055 - L2 LINE L2 -348 2965 1875 23 0 0 0 chr2 126825868 126825891 -126430692 + AT_rich Low_complexity Low_complexity 1 23 0 529 49 25 0 chr2 126828068 126828149 -126428434 + (TAGA)n Simple_repeat Simple_repeat 4 86 0 195 261 0 0 chr2 126828297 126828343 -126428240 - L2 LINE L2 -5 3308 3263 23 54 0 0 chr2 126829151 126829188 -126427395 + AT_rich Low_complexity Low_complexity 1 37 0 1891 136 72 33 chr2 126829536 126829897 -126426686 - THE1C LTR MaLR 0 375 1 9566 134 12 42 chr2 126829897 126831525 -126425058 - THE1C-int LTR MaLR 0 1580 3 1305 151 149 120 chr2 126831527 126831943 -126424640 - MSTA LTR MaLR 0 428 1 974 275 95 61 chr2 126831943 126833431 -126423152 + L1ME LINE L1 465 1974 -4106 1506 189 40 30 chr2 126833566 126833868 -126422715 + AluJb SINE Alu 1 305 -7 284 372 7 21 chr2 126834278 126834423 -126422160 - MIR SINE MIR -118 144 2 369 287 72 48 chr2 126834603 126834854 -126421729 + L1ME4a LINE L1 5860 6116 -5 534 13 40 0 chr2 126835500 126835575 -126421008 + (TCTA)n Simple_repeat Simple_repeat 4 81 0 225 328 25 25 chr2 126835800 126835919 -126420664 + MIR3 SINE MIR 47 165 -43 255 258 34 22 chr2 126836009 126836098 -126420485 + MIR SINE MIR 163 252 -10 220 228 5 16 chr2 126836462 126836523 -126420060 + MIR3 SINE MIR 94 155 -53 348 332 114 52 chr2 126836797 126837068 -126419515 + L2 LINE L2 2985 3272 0 5616 50 6 1 chr2 126838575 126839281 -126417302 - L1PA7 LINE L1 0 6154 5446 660 72 3 0 chr2 126839281 126839388 -126417195 + L1PA7 LINE L1 5354 5462 -689 422 219 41 41 chr2 126839591 126839714 -126416869 + MLT1I LTR MaLR 286 408 -1 552 293 91 35 chr2 126841547 126841888 -126414695 + LTR33 LTR ERVL 147 506 -15 2257 57 0 4 chr2 126842354 126842634 -126413949 - L1PA6 LINE L1 -14 6140 5862 317 185 0 0 chr2 126842634 126842688 -126413895 + MIR SINE MIR 102 155 -107 2117 117 3 13 chr2 126842939 126843260 -126413323 + AluSx SINE Alu 1 312 0 328 368 34 0 chr2 126844725 126844842 -126411741 - L2 LINE L2 -9 3304 3184 2180 117 0 7 chr2 126844924 126845224 -126411359 - AluSx SINE Alu -14 298 1 411 311 107 10 chr2 126845602 126845798 -126410785 - MIR SINE MIR -3 259 45 201 302 0 81 chr2 126846305 126846391 -126410192 - L2 LINE L2 -8 3264 3186 573 115 0 0 chr2 126846581 126846668 -126409915 - MER74A LTR ERVL -2 556 470 3639 135 31 64 chr2 126846679 126847381 -126409202 + LTR8 LTR ERV1 13 691 0 2289 201 29 10 chr2 126847381 126847848 -126408735 - MER74A LTR ERVL -81 477 2 193 341 75 35 chr2 126848076 126848249 -126408334 - L2 LINE L2 -648 2666 2487 2333 140 13 10 chr2 126848448 126848840 -126407743 - THE1-int LTR MaLR -170 1410 1018 1221 199 68 0 chr2 126848840 126849106 -126407477 - MST-int LTR MaLR -1014 637 354 377 125 24 20 chr2 126849106 126849186 -126407397 - MSTA LTR MaLR -269 86 1 221 83 28 0 chr2 126849951 126849987 -126406596 + (TTA)n Simple_repeat Simple_repeat 3 39 0 25 75 0 0 chr2 126850702 126850755 -126405828 + AT_rich Low_complexity Low_complexity 1 53 0 3435 127 40 33 chr2 126851122 126851375 -126405208 - LTR26 LTR ERV1 0 603 353 2545 52 3 3 chr2 126851375 126851685 -126404898 + AluY SINE Alu 1 310 -1 3435 127 40 33 chr2 126851685 126852030 -126404553 - LTR26 LTR ERV1 -250 353 1 24 0 0 0 chr2 126852406 126852430 -126404153 + AT_rich Low_complexity Low_complexity 1 24 0 2547 62 0 0 chr2 126852970 126853277 -126403306 - AluY SINE Alu -4 307 1 325 302 101 47 chr2 126853588 126853620 -126402963 - MIR3 SINE MIR -6 202 173 1873 128 48 65 chr2 126853620 126853859 -126402724 - MLT1B LTR MaLR 0 390 159 2368 87 3 3 chr2 126853859 126854169 -126402414 + AluSg SINE Alu 1 310 0 1873 128 48 65 chr2 126854169 126854326 -126402257 - MLT1B LTR MaLR -231 159 1 325 302 101 47 chr2 126854326 126854442 -126402141 - MIR3 SINE MIR -35 173 46 181 267 43 0 chr2 126854688 126854804 -126401779 + (TG)n Simple_repeat Simple_repeat 2 122 0 426 184 14 35 chr2 126854848 126854989 -126401594 + (TG)n Simple_repeat Simple_repeat 1 138 0 2393 89 0 0 chr2 126855475 126855779 -126400804 - AluSg SINE Alu -6 304 1 1857 205 8 92 chr2 126857035 126857186 -126399397 + MLT2B3 LTR ERVL 1 163 -391 2560 55 0 0 chr2 126857186 126857493 -126399090 + AluY SINE Alu 1 307 -4 1857 205 8 92 chr2 126857493 126857843 -126398740 + MLT2B3 LTR ERVL 163 460 -94 184 250 18 54 chr2 126858678 126858734 -126397849 + MIR SINE MIR 92 145 -117 2407 98 0 0 chr2 126858935 126859241 -126397342 + AluSx SINE Alu 1 306 -6 1764 154 99 3 chr2 126859254 126859586 -126396997 + MLT1A1 LTR MaLR 2 365 0 2305 110 0 0 chr2 126860097 126860398 -126396185 - AluSx SINE Alu -11 301 1 806 226 53 0 chr2 126861828 126862036 -126394547 - MER20 DNA MER1_type 0 219 1 297 241 0 0 chr2 126862177 126862289 -126394294 + (CA)n Simple_repeat Simple_repeat 1 112 0 235 211 78 102 chr2 126862609 126862737 -126393846 + MIR SINE MIR 18 142 -66 195 42 0 0 chr2 126863327 126863351 -126393232 + (CA)n Simple_repeat Simple_repeat 1 24 0 24 0 0 0 chr2 126864052 126864076 -126392507 + AT_rich Low_complexity Low_complexity 1 24 0 377 324 37 7 chr2 126864080 126864216 -126392367 + MIR SINE MIR 28 167 -95 * 826 351 126 18 chr2 126864206 126865063 -126391520 + L2 LINE L2 1142 2091 -1223 657 310 128 25 chr2 126865160 126865528 -126391055 + L2 LINE L2 2453 2858 -456 400 38 0 0 chr2 126865810 126865854 -126390729 + L1PA6 LINE L1 6096 6142 -12 219 36 0 0 chr2 126865854 126865882 -126390701 + (TA)n Simple_repeat Simple_repeat 2 29 0 645 291 18 32 chr2 126866215 126866497 -126390086 - L1MC4a LINE L1 -1913 5895 5618 310 177 0 65 chr2 126866601 126866663 -126389920 - L2 LINE L2 0 3272 3215 267 232 12 37 chr2 126866667 126866749 -126389834 - MER63 DNA MER1_type -262 799 720 21 36 0 0 chr2 126866768 126866796 -126389787 + AT_rich Low_complexity Low_complexity 1 28 0 440 153 51 0 chr2 126866814 126866951 -126389632 + (TG)n Simple_repeat Simple_repeat 1 144 0 700 266 81 13 chr2 126866951 126867270 -126389313 - L2 LINE L2 -216 3097 2745 1260 231 84 3 chr2 126867274 126867572 -126389011 + MLT1A1 LTR MaLR 1 322 -43 241 140 80 20 chr2 126867624 126867674 -126388909 - L2 LINE L2 -574 2740 2688 335 356 24 15 chr2 126867677 126867882 -126388701 - L1MC4a LINE L1 -766 5380 5174 2170 105 3 0 chr2 126867980 126868295 -126388288 + L1PA13 LINE L1 5845 6160 -3 543 271 0 0 chr2 126868456 126868574 -126388009 + MER58A DNA MER1_type 2 119 0 21 57 0 0 chr2 126868654 126868689 -126387894 + AT_rich Low_complexity Low_complexity 1 35 0 257 289 70 16 chr2 126868977 126869164 -126387419 - L1MC4a LINE L1 -1581 4565 4369 390 285 64 43 chr2 126869437 126869763 -126386820 - L1MC4a LINE L1 -2162 3984 3652 575 252 43 83 chr2 126869796 126870111 -126386472 + MLT1A2 LTR MaLR 1 298 -92 1969 149 51 28 chr2 126870147 126870503 -126386080 - THE1B LTR MaLR 0 364 1 314 229 10 0 chr2 126870507 126870603 -126385980 + CT-rich Low_complexity Low_complexity 2 98 0 239 315 27 0 chr2 126870666 126870739 -126385844 + MIR SINE MIR 60 134 -128 255 61 0 0 chr2 126871041 126871074 -126385509 + (GA)n Simple_repeat Simple_repeat 2 34 0 250 296 35 9 chr2 126871637 126871752 -126384831 + L2 LINE L2 2932 3049 -223 329 278 103 16 chr2 126872328 126872454 -126384129 + MIR SINE MIR 126 262 0 190 250 62 47 chr2 126874021 126874085 -126382498 - MER5A DNA MER1_type -50 139 75 254 242 91 50 chr2 126874342 126874441 -126382142 + MER70B LTR ERVL 232 334 -244 376 291 54 20 chr2 126874695 126874843 -126381740 + L1ME LINE L1 5578 5730 -391 1905 134 0 24 chr2 126874990 126875288 -126381295 + AluSg SINE Alu 1 291 -19 271 293 0 27 chr2 126876464 126876539 -126380044 + polypyrimidine Low_complexity Low_complexity 4 76 0 399 257 9 0 chr2 126877135 126877244 -126379339 - MER94 DNA DNA -21 113 4 21 36 0 0 chr2 126877866 126877894 -126378689 + AT_rich Low_complexity Low_complexity 1 28 0 236 289 50 63 chr2 126878009 126878168 -126378415 - MIR3 SINE MIR -30 178 22 530 121 19 21 chr2 126878457 126878560 -126378023 + MLT1A2 LTR MaLR 1 99 -275 744 185 51 19 chr2 126878561 126878718 -126377865 + LTR40a LTR ERVL 358 519 0 327 336 42 19 chr2 126878774 126879033 -126377550 + L1MC4a LINE L1 5623 5887 -1921 413 298 176 62 chr2 126879074 126879494 -126377089 - L2 LINE L2 0 3313 2846 241 174 72 14 chr2 126879642 126879711 -126376872 + L1MCa LINE L1 2005 2077 -4349 206 191 24 0 chr2 126880356 126880398 -126376185 + (TA)n Simple_repeat Simple_repeat 2 44 0 210 185 19 37 chr2 126880977 126881031 -126375552 - L2 LINE L2 0 3313 3261 330 366 11 29 chr2 126882060 126882235 -126374348 - MER5A DNA MER1_type -11 178 7 215 277 50 89 chr2 126882921 126883022 -126373561 + MIR SINE MIR 159 255 -7 22 35 0 0 chr2 126883550 126883579 -126373004 + AT_rich Low_complexity Low_complexity 1 29 0 2293 119 3 60 chr2 126884129 126884515 -126372068 - THE1B LTR MaLR 0 364 1 1881 177 0 0 chr2 126884530 126884835 -126371748 - AluSx SINE Alu -7 305 1 1290 185 18 105 chr2 126884929 126885258 -126371325 + MLT1A1 LTR MaLR 1 290 -75 1542 182 7 42 chr2 126885258 126885565 -126371018 - AluJo SINE Alu -16 296 1 1290 185 18 105 chr2 126885565 126885635 -126370948 + MLT1A1 LTR MaLR 290 365 0 180 111 0 0 chr2 126886108 126886135 -126370448 + (GA)n Simple_repeat Simple_repeat 2 28 0 450 344 26 7 chr2 126886372 126886523 -126370060 + MIR SINE MIR 12 165 -97 208 192 27 27 chr2 126886685 126886758 -126369825 + (TCTA)n Simple_repeat Simple_repeat 3 75 0 23 0 0 0 chr2 126887793 126887816 -126368767 + AT_rich Low_complexity Low_complexity 1 23 0 203 330 93 21 chr2 126889340 126889437 -126367146 + MIR SINE MIR 3 106 -156 253 244 94 87 chr2 126890599 126890726 -126365857 + MIR SINE MIR 112 239 -23 489 17 0 0 chr2 126891665 126891723 -126364860 + (TG)n Simple_repeat Simple_repeat 2 59 0 216 0 0 0 chr2 126893963 126893987 -126362596 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 316 320 56 35 chr2 126895012 126895243 -126361340 + L1ME LINE L1 1348 1583 -5051 262 286 236 0 chr2 126895268 126895486 -126361097 + L1ME LINE L1 1522 1932 -4879 213 39 0 0 chr2 126895543 126895569 -126361014 + (T)n Simple_repeat Simple_repeat 1 26 0 1106 129 53 0 chr2 126895569 126895740 -126360843 - THE1-int LTR MaLR -130 1450 1271 2405 56 0 17 chr2 126895740 126896042 -126360541 - AluY SINE Alu -9 302 6 2109 138 3 0 chr2 126896279 126896590 -126359993 + AluSx SINE Alu 1 312 0 444 349 40 1 chr2 126896598 126896810 -126359773 + MIR SINE MIR 35 252 -10 788 237 58 39 chr2 126896810 126897067 -126359516 - MIR SINE MIR 0 262 1 234 294 59 12 chr2 126897166 126897251 -126359332 + L1M4 LINE L1 4076 4164 -1982 260 308 0 44 chr2 126897419 126897510 -126359073 - MLT1G1 LTR MaLR -204 391 305 1006 266 61 47 chr2 126897638 126898081 -126358502 - MLT1H1 LTR MaLR -33 522 74 286 306 60 52 chr2 126898270 126898404 -126358179 + LTR16A LTR ERVL 114 248 -202 3677 279 109 34 chr2 126898939 126902792 -126353791 + L1ME LINE L1 2039 6235 -433 2511 50 3 3 chr2 126902792 126903089 -126353494 + AluY SINE Alu 7 303 -8 3677 279 109 34 chr2 126903089 126903559 -126353024 + L1ME LINE L1 6235 6668 0 665 194 0 8 chr2 126903978 126904107 -126352476 + L1M4c LINE L1 10 137 -6405 2378 247 31 25 chr2 126904116 126904698 -126351885 + L1M4c LINE L1 368 956 -5586 2116 127 36 28 chr2 126904698 126905059 -126351524 - THE1B LTR MaLR 0 364 1 2378 247 31 25 chr2 126905059 126905159 -126351424 + L1M4c LINE L1 956 1054 -5488 1932 169 38 5 chr2 126905176 126905595 -126350988 - L1MA7 LINE L1 -5 6286 5854 607 132 18 0 chr2 126905595 126905709 -126350874 + L1 LINE L1 5089 5204 -942 8550 203 40 23 chr2 126905712 126907295 -126349288 - L1MB1 LINE L1 -342 7266 5640 423 0 0 0 chr2 126907295 126907342 -126349241 + (CA)n Simple_repeat Simple_repeat 2 48 0 8550 203 40 23 chr2 126907342 126908078 -126348505 - L1MB1 LINE L1 -1968 5640 4918 1841 250 59 36 chr2 126908073 126909163 -126347420 - L1MB1 LINE L1 -3787 3778 2785 * 25 31 0 0 chr2 126909164 126909196 -126347387 + AT_rich Low_complexity Low_complexity 1 32 0 580 205 43 0 chr2 126909196 126909381 -126347202 + L1M4c LINE L1 2430 2622 -4024 807 154 18 17 chr2 126909382 126909659 -126346924 + Tigger2a DNA MER2_type 1 364 -80 2204 245 32 0 chr2 126909670 126910287 -126346296 + L1M4c LINE L1 2668 3304 -3340 865 235 76 23 chr2 126910284 126910442 -126346141 + L1M4c LINE L1 4468 4647 -1997 * 2257 143 50 26 chr2 126910442 126910860 -126345723 - MSTA LTR MaLR 0 428 1 865 235 76 23 chr2 126910860 126910965 -126345618 + L1M4c LINE L1 4647 4745 -1899 * 1078 342 30 9 chr2 126910964 126911405 -126345178 + L1M2 LINE L1 1 450 -6399 364 318 112 62 chr2 126911909 126912088 -126344495 + L1M2 LINE L1 598 785 -6064 1034 259 48 51 chr2 126912118 126912434 -126344149 + L1PA16 LINE L1 452 766 -6083 2812 232 28 10 chr2 126912869 126913777 -126342806 + L1PA16 LINE L1 1423 2421 -4428 2163 215 34 28 chr2 126913778 126914341 -126342242 + L1 LINE L1 4189 4754 -1392 275 192 0 0 chr2 126914364 126914416 -126342167 + L1 LINE L1 4702 4753 -1393 4975 150 26 6 chr2 126914470 126914978 -126341605 + L1PA16 LINE L1 4751 5247 -919 2184 151 22 6 chr2 126914978 126915336 -126341247 - THE1B LTR MaLR 0 364 1 4975 150 26 6 chr2 126915336 126916223 -126340360 + L1PA16 LINE L1 5247 6157 -9 1673 190 73 0 chr2 126916235 126916593 -126339990 + L1PA16 LINE L1 2410 2793 -4056 * 9058 211 37 13 chr2 126916589 126919097 -126337486 + L1PA16 LINE L1 3730 6296 -573 1475 208 6 3 chr2 126919095 126919408 -126337175 - L1P LINE L1 -1218 4928 4615 * 2873 152 99 4 chr2 126919414 126919960 -126336623 + L1PA16 LINE L1 6269 6866 -3 1521 262 45 5 chr2 126919954 126919977 -126336606 + L1MB7 LINE L1 4233 4254 -1892 * 207 0 0 0 chr2 126919977 126920000 -126336583 + (CA)n Simple_repeat Simple_repeat 2 24 0 1521 262 45 5 chr2 126920000 126920570 -126336013 + L1MB7 LINE L1 4254 4895 -1251 1939 199 42 7 chr2 126920572 126921005 -126335578 + L1MB7 LINE L1 5718 6165 -19 726 249 19 49 chr2 126921046 126921251 -126335332 - MIR SINE MIR -36 226 28 297 298 84 8 chr2 126921278 126921409 -126335174 - MIR SINE MIR -38 224 84 404 339 33 17 chr2 126922143 126922323 -126334260 + MIR SINE MIR 69 251 -11 205 259 19 0 chr2 126922522 126922576 -126334007 - L3 LINE CR1 -376 1201 1147 1150 206 99 2 chr2 126922581 126922987 -126333596 - MER74A LTR ERVL 0 558 47 390 239 97 22 chr2 126923041 126923186 -126333397 + MIR SINE MIR 41 191 -71 929 301 46 46 chr2 126923267 126923659 -126332924 - L2 LINE L2 -42 3271 2880 2325 212 119 29 chr2 126923677 126924342 -126332241 + MER50 LTR ERV1 10 734 0 1285 286 58 60 chr2 126924346 126925064 -126331519 - L2 LINE L2 -448 2866 2150 433 204 65 143 chr2 126925139 126925384 -126331199 + L2 LINE L2 3087 3312 -1 728 268 12 0 chr2 126926281 126926449 -126330134 - MER5A DNA MER1_type -2 187 18 401 350 78 19 chr2 126927136 126927342 -126329241 - MIR SINE MIR -10 252 35 926 292 39 47 chr2 126927509 126928148 -126328435 - MLT1E LTR MaLR 0 593 1 306 256 107 41 chr2 126929225 126929346 -126327237 + MIR SINE MIR 21 149 -113 886 210 16 5 chr2 126930808 126930994 -126325589 - MER20 DNA MER1_type -1 218 31 414 0 0 0 chr2 126931313 126931359 -126325224 + (CA)n Simple_repeat Simple_repeat 2 47 0 2387 238 41 15 chr2 126931545 126932151 -126324432 - MLT1E2 LTR MaLR 0 626 5 1727 218 86 13 chr2 126932253 126932796 -126323787 - L1MD3 LINE L1 -1 7872 7182 273 57 0 0 chr2 126932934 126932969 -126323614 + (GA)n Simple_repeat Simple_repeat 2 36 0 1270 223 3 66 chr2 126933847 126934197 -126322386 + MLT2C1 LTR ERVL 15 342 -55 232 365 0 0 chr2 126934197 126934293 -126322290 + (TA)n Simple_repeat Simple_repeat 2 97 0 867 316 50 18 chr2 126934400 126934796 -126321787 - HERV16 LTR ERVL -4583 413 5 1115 296 66 20 chr2 126934800 126935234 -126321349 - LTR16A LTR ERVL 0 450 1 607 313 36 42 chr2 126936353 126936660 -126319923 + MLT1K LTR MaLR 279 583 -5 400 335 71 0 chr2 126936822 126936977 -126319606 + MIR3 SINE MIR 38 203 -5 360 0 0 0 chr2 126937605 126937645 -126318938 + (TG)n Simple_repeat Simple_repeat 1 40 0 1051 20 40 0 chr2 126938224 126938373 -126318210 + (TCTA)n Simple_repeat Simple_repeat 3 157 0 767 286 61 0 chr2 126938572 126938817 -126317766 + MIR SINE MIR 3 262 0 540 267 116 6 chr2 126938881 126939053 -126317530 + MIR SINE MIR 23 213 -49 655 282 6 0 chr2 126940276 126940432 -126316151 + MLT1I LTR MaLR 34 190 -219 378 186 0 0 chr2 126940545 126940615 -126315968 + MLT1I LTR MaLR 336 405 -4 509 330 59 4 chr2 126941754 126941993 -126314590 + MER110 LTR ERV1 171 422 -69 455 240 49 66 chr2 126942809 126942992 -126313591 - MIR SINE MIR -69 193 14 2227 94 7 0 chr2 126943079 126943401 -126313182 - AluSx SINE Alu 0 312 3 294 106 0 0 chr2 126944880 126944927 -126311656 + (TG)n Simple_repeat Simple_repeat 2 48 0 632 178 93 0 chr2 126945876 126946005 -126310578 + L1MD3 LINE L1 7730 7870 -125 1910 186 99 14 chr2 126946005 126946621 -126309962 - MER39 LTR ERV1 0 707 1 529 220 17 0 chr2 126946623 126946741 -126309842 + L1MD3 LINE L1 7870 7989 -6 1713 102 4 0 chr2 126946884 126947119 -126309464 - AluY SINE Alu -15 296 61 551 290 151 54 chr2 126947922 126948039 -126308544 - L2 LINE L2 0 3313 3209 252 0 0 0 chr2 126948039 126948067 -126308516 + (TG)n Simple_repeat Simple_repeat 2 29 0 551 290 151 54 chr2 126948067 126948394 -126308189 - L2 LINE L2 -104 3209 2826 675 271 96 46 chr2 126949886 126950166 -126306417 + Charlie2 DNA MER1_type 18 311 -2551 323 212 263 0 chr2 126950313 126950450 -126306133 + Charlie2a DNA MER1_type 1487 1659 -1203 246 197 33 0 chr2 126950472 126950533 -126306050 + Charlie2a DNA MER1_type 2728 2790 -72 1040 229 92 13 chr2 126951843 126952158 -126304425 + MER58B DNA MER1_type 1 340 -1 247 335 173 0 chr2 126952651 126952905 -126303678 + L2 LINE L2 1792 2089 -1225 2595 87 0 48 chr2 126953820 126954255 -126302328 + L1P LINE L1 2873 3286 -2860 6259 255 114 13 chr2 126954257 126955292 -126301291 - L1M4 LINE L1 -1318 5064 4135 2486 66 3 0 chr2 126955292 126955596 -126300987 + AluY SINE Alu 1 305 -6 6259 255 114 13 chr2 126955596 126957038 -126299545 - L1M4 LINE L1 -2247 4135 2330 288 293 30 18 chr2 126957304 126957471 -126299112 - L1MEc LINE L1 -1488 4727 4559 2011 152 3 0 chr2 126957504 126957814 -126298769 + AluSx SINE Alu 1 311 -1 389 256 164 34 chr2 126957860 126958122 -126298461 - L1MEc LINE L1 -1701 4514 4219 515 307 58 41 chr2 126958126 126958692 -126297891 - L1MEc LINE L1 -2052 4163 3588 348 316 39 46 chr2 126958932 126959214 -126297369 - L1MEc LINE L1 -2839 3376 3097 668 139 0 8 chr2 126959226 126959348 -126297235 + (TTCC)n Simple_repeat Simple_repeat 1 121 0 1412 195 70 0 chr2 126959348 126959620 -126296963 - AluJo SINE Alu -19 293 3 233 306 81 12 chr2 126959730 126959890 -126296693 - L1MEc LINE L1 -3239 2976 2806 445 312 124 30 chr2 126960071 126960475 -126296108 - L1MEc LINE L1 -3594 2621 2180 235 165 193 46 chr2 126960891 126961000 -126295583 + HsTC2 DNA Tc2 1757 1881 -17 23 33 0 0 chr2 126961276 126961306 -126295277 + AT_rich Low_complexity Low_complexity 1 30 0 301 301 122 25 chr2 126961620 126961816 -126294767 - MLT1K LTR MaLR -188 400 186 310 308 58 10 chr2 126964487 126964591 -126291992 + L2 LINE L2 3121 3229 -43 337 108 16 44 chr2 126965070 126965159 -126291424 + L1PA14 LINE L1 5784 5834 -329 2138 120 12 0 chr2 126965195 126965528 -126291055 + L1PA14 LINE L1 5824 6160 -1 2072 173 5 17 chr2 126965528 126965943 -126290640 + L1MB3 LINE L1 5770 6181 -2 925 183 0 6 chr2 126965950 126966130 -126290453 + L1MB3 LINE L1 6002 6180 -3 1719 167 0 17 chr2 126966922 126967215 -126289368 + AluJb SINE Alu 1 288 -24 244 208 366 0 chr2 126967499 126967600 -126288983 + MER46C DNA MER2_type 79 216 -122 189 293 0 0 chr2 126967674 126967715 -126288868 + L2 LINE L2 3221 3261 -11 180 0 0 0 chr2 126968233 126968253 -126288330 + (TTTC)n Simple_repeat Simple_repeat 2 21 0 3339 270 44 31 chr2 126968942 126969622 -126286961 - L1MEc LINE L1 -4890 1506 836 2302 106 0 3 chr2 126969622 126969923 -126286660 - AluSc SINE Alu -9 300 1 3339 270 44 31 chr2 126969923 126970678 -126285905 - L1MEc LINE L1 -5560 836 53 327 369 0 0 chr2 126972297 126972419 -126284164 + (TG)n Simple_repeat Simple_repeat 1 122 0 3906 27 13 8 chr2 126972586 126973064 -126283519 + L1PA3 LINE L1 5676 6155 0 256 254 97 52 chr2 126973559 126973693 -126282890 + MLT1J2 LTR MaLR 74 213 -237 358 331 66 0 chr2 126973994 126974115 -126282468 + L2 LINE L2 3142 3270 -2 476 367 50 24 chr2 126974152 126974405 -126282178 + MIR SINE MIR 9 262 0 2816 181 132 4 chr2 126974531 126975215 -126281368 - LTR48 LTR ERV1 0 787 17 22 0 0 0 chr2 126975691 126975713 -126280870 + AT_rich Low_complexity Low_complexity 1 22 0 248 281 180 0 chr2 126976942 126977031 -126279552 - MIR SINE MIR -72 190 86 627 263 11 6 chr2 126977190 126977365 -126279218 - MER69A DNA AcHobo -1 176 1 226 220 0 0 chr2 126977821 126977871 -126278712 + (TG)n Simple_repeat Simple_repeat 1 50 0 204 200 0 0 chr2 126977871 126977921 -126278662 + (TA)n Simple_repeat Simple_repeat 1 50 0 2029 123 17 31 chr2 126978746 126978814 -126277769 + L1MA6 LINE L1 5947 6014 -286 3733 124 12 14 chr2 126978814 126979380 -126277203 + MER61E LTR ERV1 1 565 -4 2029 123 17 31 chr2 126979380 126979670 -126276913 + L1MA6 LINE L1 6014 6300 0 278 406 51 0 chr2 126980857 126980995 -126275588 - L2 LINE L2 -4 3268 3124 259 190 0 17 chr2 126981159 126981217 -126275366 + LTR40a LTR ERVL 91 147 -372 232 257 64 80 chr2 126981436 126981623 -126274960 + LTR40a LTR ERVL 246 429 -90 1762 195 72 21 chr2 126981742 126982172 -126274411 + MLT1C LTR MaLR 1 452 -15 747 333 84 19 chr2 126982930 126983453 -126273130 + L2 LINE L2 1973 2529 -785 29 60 0 0 chr2 126983482 126983532 -126273051 + AT_rich Low_complexity Low_complexity 1 50 0 567 264 60 50 chr2 126983584 126983883 -126272700 - MLT1L LTR MaLR -155 460 159 997 181 31 62 chr2 126984568 126984794 -126271789 - MER20 DNA MER1_type 0 219 1 296 223 7 115 chr2 126984858 126984956 -126271627 + MLT1I LTR MaLR 81 161 -248 2385 71 0 26 chr2 126984956 126985264 -126271319 + AluY SINE Alu 1 300 -11 296 223 7 115 chr2 126985264 126985304 -126271279 + MLT1I LTR MaLR 161 204 -205 481 359 19 69 chr2 126985520 126985840 -126270743 + L2 LINE L2 2575 2878 -436 2582 64 0 0 chr2 126986688 126986999 -126269584 + AluY SINE Alu 1 311 0 317 279 31 62 chr2 126987069 126987230 -126269353 - MIR SINE MIR -72 190 35 239 296 174 21 chr2 126987913 126988118 -126268465 + MIR SINE MIR 10 242 -20 849 158 28 6 chr2 126988941 126989118 -126267465 + L1M4 LINE L1 5222 5402 -744 21 0 0 0 chr2 126989247 126989268 -126267315 + AT_rich Low_complexity Low_complexity 1 21 0 2326 85 10 3 chr2 126989362 126989656 -126266927 + AluSx SINE Alu 1 296 -16 389 255 38 28 chr2 126989803 126989909 -126266674 - L3 LINE CR1 -42 1535 1429 384 22 0 0 chr2 126991063 126991108 -126265475 + (TTTA)n Simple_repeat Simple_repeat 3 47 0 287 149 68 14 chr2 126991120 126991194 -126265389 - L1MA9 LINE L1 -34 6278 6201 595 324 148 5 chr2 126991224 126991597 -126264986 + MER69 DNA AcHobo 143 568 -658 * 1396 243 51 16 chr2 126991584 126992094 -126264489 + MER69 DNA AcHobo 1999 2526 0 202 279 66 0 chr2 126992196 126992257 -126264326 + L2 LINE L2 3203 3267 -5 657 132 72 26 chr2 126993013 126993165 -126263418 + MER53 DNA DNA 30 188 -1 225 331 25 37 chr2 126993729 126993892 -126262691 + MIR SINE MIR 100 260 -2 2153 113 0 0 chr2 126993947 126994261 -126262322 + AluSx SINE Alu 1 314 0 189 147 0 0 chr2 126994570 126994604 -126261979 + (T)n Simple_repeat Simple_repeat 1 34 0 405 0 0 0 chr2 126994823 126994868 -126261715 + (TA)n Simple_repeat Simple_repeat 2 46 0 296 382 11 14 chr2 126996226 126996384 -126260199 + MIR3 SINE MIR 14 173 -62 24 0 0 0 chr2 126996927 126996951 -126259632 + AT_rich Low_complexity Low_complexity 1 24 0 467 101 13 0 chr2 126997361 126997440 -126259143 + (TG)n Simple_repeat Simple_repeat 1 80 0 994 189 70 5 chr2 126998337 126998538 -126258045 + Tigger7 DNA MER2_type 53 266 -284 568 192 0 0 chr2 126998536 126998635 -126257948 + Tigger7 DNA MER2_type 2389 2487 0 * 186 263 0 0 chr2 126998855 126998912 -126257671 + (CATATA)n Simple_repeat Simple_repeat 2 58 0 324 278 108 70 chr2 126998915 126999302 -126257281 - L2 LINE L2 -134 3179 2773 447 323 12 67 chr2 126999325 126999566 -126257017 - MIR SINE MIR -2 260 28 1538 199 26 20 chr2 126999689 127000040 -126256543 + MLT1A1 LTR MaLR 1 353 -12 405 284 168 0 chr2 127000209 127000399 -126256184 - LTR16A LTR ERVL -57 393 172 285 381 106 8 chr2 127002340 127002576 -126254007 - L2 LINE L2 -357 2957 2699 362 298 45 118 chr2 127003054 127003454 -126253129 + L2 LINE L2 2943 3313 0 209 289 0 84 chr2 127004371 127004454 -126252129 + MIR SINE MIR 10 85 -177 312 319 28 28 chr2 127004498 127004639 -126251944 + MIR SINE MIR 3 143 -119 1820 146 153 20 chr2 127004849 127005253 -126251330 + LTR24 LTR ERV1 10 467 0 373 351 23 23 chr2 127005298 127005472 -126251111 + MIR3 SINE MIR 19 192 -16 531 309 42 16 chr2 127005497 127005688 -126250895 + L3 LINE CR1 1244 1439 -138 238 282 39 26 chr2 127005931 127006087 -126250496 + L1ME LINE L1 5748 5905 -216 2124 117 3 7 chr2 127006099 127006398 -126250185 - AluSp SINE Alu -15 298 1 3149 201 11 3 chr2 127007813 127008473 -126248110 + L1MC3 LINE L1 7100 7764 -21 1044 263 101 108 chr2 127008475 127009669 -126246914 - L2 LINE L2 -157 3156 1990 34951 51 11 1 chr2 127009688 127015759 -126240824 + L1PA5 LINE L1 11 6149 -5 2003 100 11 0 chr2 127015760 127016089 -126240494 + AluY SINE Alu 2 333 0 234 296 34 11 chr2 127016090 127016178 -126240405 + MIR SINE MIR 154 243 -19 29 28 0 0 chr2 127016234 127016270 -126240313 + AT_rich Low_complexity Low_complexity 1 36 0 2449 309 107 42 chr2 127016273 127017959 -126238624 - L2 LINE L2 -1318 1996 200 1853 131 34 67 chr2 127018305 127018693 -126237890 + THE1C LTR MaLR 1 375 0 1195 221 56 89 chr2 127018697 127019159 -126237424 + MLT1C LTR MaLR 21 467 0 1181 293 215 15 chr2 127019894 127020846 -126235737 - L2 LINE L2 -3 3310 2165 235 146 0 21 chr2 127021083 127021131 -126235452 + (TG)n Simple_repeat Simple_repeat 1 47 0 261 413 12 0 chr2 127021342 127021514 -126235069 - L2 LINE L2 -990 2324 2151 211 275 75 12 chr2 127021959 127022039 -126234544 - L2 LINE L2 -224 3048 2964 21 0 0 0 chr2 127022039 127022060 -126234523 + AT_rich Low_complexity Low_complexity 1 21 0 320 343 60 64 chr2 127022320 127022571 -126234012 - L2 LINE L2 -18 3254 3005 266 282 56 0 chr2 127023069 127023140 -126233443 - L2 LINE L2 -3 3269 3195 320 277 31 69 chr2 127023358 127023517 -126233066 - L2 LINE L2 -5 3308 3156 180 0 0 0 chr2 127023553 127023573 -126233010 + (CTG)n Simple_repeat Simple_repeat 1 20 0 560 287 44 6 chr2 127023721 127023902 -126232681 + MIR SINE MIR 28 215 -47 216 204 0 0 chr2 127024625 127024669 -126231914 + T-rich Low_complexity Low_complexity 1 44 0 2372 231 20 53 chr2 127025728 127026682 -126229901 - L1 LINE L1 -2596 3550 2629 901 176 37 5 chr2 127026701 127026889 -126229694 + L1 LINE L1 3565 3758 -2388 5027 174 30 3 chr2 127026889 127028093 -126228490 + L1PA16 LINE L1 4919 6150 -16 920 256 96 8 chr2 127028139 127028526 -126228057 - L1M4 LINE L1 -2572 4072 3652 545 337 98 24 chr2 127028579 127029122 -126227461 - L1M4 LINE L1 -5959 583 1 3688 154 29 47 chr2 127029257 127030041 -126226542 - LTR1 LTR ERV1 0 785 16 269 319 7 21 chr2 127030740 127030884 -126225699 + L1ME LINE L1 5559 5700 -464 234 250 113 12 chr2 127031132 127031212 -126225371 - L1M4 LINE L1 -6064 478 391 188 389 22 29 chr2 127031552 127031691 -126224892 - MIR3 SINE MIR -2 206 69 263 315 16 9 chr2 127032782 127032916 -126223667 - L1ME LINE L1 -470 5700 5559 277 338 46 20 chr2 127033798 127033949 -126222634 - MER91A DNA MER1_type -16 180 26 478 291 77 53 chr2 127034080 127034379 -126222204 - L1ME4a LINE L1 -164 5957 5652 232 304 192 0 chr2 127035157 127035282 -126221301 + MIR SINE MIR 50 198 -64 1917 139 18 7 chr2 127037111 127037431 -126219152 + AluSq SINE Alu 1 323 0 695 215 40 53 chr2 127037436 127037655 -126218928 + L1MB5 LINE L1 22 239 -6303 1322 221 35 67 chr2 127037655 127038058 -126218525 + MLT1B LTR MaLR 1 390 0 695 215 40 53 chr2 127038058 127038085 -126218498 + L1MB5 LINE L1 239 265 -6277 * 3046 255 54 10 chr2 127038083 127039354 -126217229 + L1MB5 LINE L1 732 2110 -4536 4395 258 46 61 chr2 127039424 127041851 -126214732 + L1MB5 LINE L1 2278 4666 -1978 575 194 28 0 chr2 127041863 127041971 -126214612 + G-rich Low_complexity Low_complexity 5 115 0 786 68 92 0 chr2 127041971 127042134 -126214449 + GA-rich Low_complexity Low_complexity 3 180 0 400 132 50 60 chr2 127042155 127042337 -126214246 + GA-rich Low_complexity Low_complexity 1 180 0 737 157 10 28 chr2 127042480 127042758 -126213825 + GA-rich Low_complexity Low_complexity 1 273 0 512 263 74 21 chr2 127042782 127043025 -126213558 + L1MB5 LINE L1 4644 4899 -1745 * 3208 245 34 9 chr2 127043023 127043178 -126213405 + L1MB5 LINE L1 5392 5542 -1130 3143 75 7 0 chr2 127043178 127043594 -126212989 + L1PA6 LINE L1 5733 6151 -3 3208 245 34 9 chr2 127043594 127044655 -126211928 + L1MB5 LINE L1 5542 6637 -35 490 256 188 9 chr2 127045056 127045279 -126211304 - LTR37A LTR ERV1 -163 263 1 2165 127 69 0 chr2 127046019 127046365 -126210218 - THE1C LTR MaLR 0 375 6 184 328 49 64 chr2 127046388 127046794 -126209789 - L2 LINE L2 -2415 899 500 3544 241 38 55 chr2 127046926 127048066 -126208517 + MLT1B-int LTR MaLR 1 1120 -251 1903 163 7 85 chr2 127048066 127048241 -126208342 + MLT1B LTR MaLR 1 188 -202 2021 135 7 0 chr2 127048241 127048538 -126208045 + AluSc SINE Alu 1 299 -10 1903 163 7 85 chr2 127048538 127048785 -126207798 + MLT1B LTR MaLR 188 390 0 1121 186 59 8 chr2 127048785 127049021 -126207562 + MLT1B-int LTR MaLR 1484 1731 -4 2018 186 35 0 chr2 127049025 127049402 -126207181 + MLT1B LTR MaLR 1 390 0 1519 197 25 3 chr2 127049402 127049717 -126206866 + L1MB7 LINE L1 5847 6168 -16 1581 128 45 8 chr2 127051104 127051347 -126205236 + AluSx SINE Alu 61 312 0 1809 156 0 24 chr2 127052590 127052933 -126203650 - AluSx SINE Alu 0 336 1 1561 186 16 23 chr2 127053334 127053640 -126202943 + AluSx SINE Alu 1 304 -8 2599 222 57 80 chr2 127053965 127054795 -126201788 - MER21B LTR ERV1 -52 811 1 305 177 81 0 chr2 127055215 127055277 -126201306 - L2 LINE L2 -18 3295 3229 198 377 0 0 chr2 127055419 127055480 -126201103 + L2 LINE L2 3203 3263 -9 431 302 44 62 chr2 127055704 127055929 -126200654 + MIR SINE MIR 36 256 -6 970 154 6 0 chr2 127056946 127057115 -126199468 + L1MA6 LINE L1 6127 6296 -4 1841 228 110 9 chr2 127058069 127058652 -126197931 - LTR48B LTR ERV1 0 644 3 375 357 32 38 chr2 127058718 127058903 -126197680 + MIR SINE MIR 35 218 -44 474 49 0 0 chr2 127059673 127059734 -126196849 + (GA)n Simple_repeat Simple_repeat 2 62 0 323 274 201 45 chr2 127060009 127060188 -126196395 - L1MC/D LINE L1 -2229 5579 5373 270 56 0 0 chr2 127060298 127060334 -126196249 + (TG)n Simple_repeat Simple_repeat 2 37 0 372 187 4 41 chr2 127060914 127061025 -126195558 + LTR24B LTR ERV1 1 104 -361 467 305 66 44 chr2 127061091 127061409 -126195174 + LTR24B LTR ERV1 245 569 -7 3186 160 18 6 chr2 127061410 127061960 -126194623 - MER34C LTR ERV1 -25 560 4 2172 99 0 7 chr2 127062292 127062599 -126193984 + AluSq SINE Alu 5 309 0 183 80 0 0 chr2 127063043 127063068 -126193515 + (T)n Simple_repeat Simple_repeat 1 25 0 204 385 68 14 chr2 127063847 127063995 -126192588 + L2 LINE L2 3115 3270 -2 2086 139 3 0 chr2 127064428 127064738 -126191845 - AluSq SINE Alu -2 311 1 241 338 71 45 chr2 127065556 127065710 -126190873 + MIR3 SINE MIR 30 187 -21 2018 118 4 7 chr2 127065864 127066173 -126190410 + AluSx SINE Alu 3 310 0 195 259 52 0 chr2 127067521 127067579 -126189004 - L2 LINE L2 -66 3247 3187 1829 141 95 6 chr2 127067629 127067955 -126188628 + THE1A LTR MaLR 1 355 0 192 152 0 0 chr2 127067966 127067999 -126188584 + (CA)n Simple_repeat Simple_repeat 2 34 0 398 331 119 37 chr2 127068064 127068417 -126188166 - LTR67 LTR ERVL -25 532 151 198 370 65 0 chr2 127068505 127068613 -126187970 + L2 LINE L2 3141 3255 -17 255 319 0 0 chr2 127069523 127069592 -126186991 + (CA)n Simple_repeat Simple_repeat 1 69 0 226 306 68 53 chr2 127069622 127069828 -126186755 - MIR SINE MIR 0 262 54 20359 161 26 29 chr2 127069832 127073629 -126182954 + L1M1 LINE L1 13 3811 -3754 5392 244 75 49 chr2 127073630 127077345 -126179238 - L1 LINE L1 -1795 4587 776 737 169 79 28 chr2 127077723 127077901 -126178682 - MLT1B LTR MaLR -203 187 1 26 0 0 0 chr2 127077940 127077966 -126178617 + AT_rich Low_complexity Low_complexity 1 26 0 293 296 25 12 chr2 127077974 127078136 -126178447 - L1MDa LINE L1 -4585 1544 1381 388 283 51 79 chr2 127078256 127078609 -126177974 - L1MDa LINE L1 -4881 1238 896 1381 132 27 11 chr2 127078680 127079107 -126177476 + MER75 DNA T2_type 1 514 0 379 285 7 7 chr2 127079107 127079244 -126177339 - L1MDa LINE L1 -5285 834 698 2228 102 0 10 chr2 127079544 127079857 -126176726 - AluSg SINE Alu 0 310 1 2848 13 0 0 chr2 127080085 127080396 -126176187 - AluYa5 SINE Alu 0 311 1 768 316 69 65 chr2 127080812 127081378 -126175205 - L1MDa LINE L1 -860 2041 1439 311 263 63 21 chr2 127081714 127081809 -126174774 + L2 LINE L2 3172 3270 -2 303 140 0 0 chr2 127082405 127082455 -126174128 + (T)n Simple_repeat Simple_repeat 1 50 0 307 281 111 7 chr2 127082672 127082807 -126173776 - L1ME3A LINE L1 -17 6153 6005 811 286 5 24 chr2 127082857 127083070 -126173513 + MER58A DNA MER1_type 1 209 -15 693 276 90 40 chr2 127083088 127083595 -126172988 - L1ME3A LINE L1 -368 5794 5277 342 265 51 0 chr2 127083738 127083855 -126172728 - L1ME3A LINE L1 -1404 4742 4620 224 371 7 53 chr2 127084175 127084326 -126172257 - MER5B DNA MER1_type -34 144 1 213 335 138 43 chr2 127084819 127085007 -126171576 - MIR SINE MIR -6 256 51 2775 225 51 24 chr2 127085447 127086229 -126170354 - MER97a DNA MER1_type? -68 826 24 497 295 18 82 chr2 127086733 127086942 -126169641 + MIR SINE MIR 16 212 -50 211 327 19 39 chr2 127087118 127087222 -126169361 + MIR SINE MIR 30 131 -77 335 213 0 130 chr2 127087771 127087879 -126168704 - L2 LINE L2 0 3313 3220 1057 308 109 27 chr2 127088400 127089069 -126167514 - L2 LINE L2 -202 3111 2391 1890 92 0 4 chr2 127090572 127090822 -126165761 + AluSc SINE Alu 31 279 -30 252 0 0 0 chr2 127090832 127090860 -126165723 + (TAAAA)n Simple_repeat Simple_repeat 3 30 0 23 33 0 0 chr2 127091885 127091915 -126164668 + AT_rich Low_complexity Low_complexity 1 30 0 241 296 34 34 chr2 127092868 127092956 -126163627 - MIR SINE MIR -81 127 40 26 30 0 0 chr2 127093173 127093206 -126163377 + AT_rich Low_complexity Low_complexity 1 33 0 34 0 0 0 chr2 127094424 127094458 -126162125 + AT_rich Low_complexity Low_complexity 1 34 0 188 342 50 37 chr2 127095178 127095339 -126161244 - MIR SINE MIR -98 164 2 1107 241 24 9 chr2 127095615 127095951 -126160632 + L1M4 LINE L1 3208 3548 -2598 259 227 15 0 chr2 127095959 127096025 -126160558 + MLT1C-int LTR MaLR 815 881 -490 1246 269 19 39 chr2 127096192 127096641 -126159942 + MLT1C-int LTR MaLR 953 1734 -1 1285 197 31 55 chr2 127096642 127097052 -126159531 + MLT1C LTR MaLR 1 390 0 301 204 0 111 chr2 127097071 127097179 -126159404 + L1MEc LINE L1 2343 2438 -3958 340 268 58 14 chr2 127097330 127097468 -126159115 - MER5A DNA MER1_type -5 184 41 252 0 0 0 chr2 127097672 127097700 -126158883 + (T)n Simple_repeat Simple_repeat 1 28 0 440 344 39 9 chr2 127098721 127098951 -126157632 - MIR SINE MIR -23 239 3 185 371 48 0 chr2 127100402 127100464 -126156119 - L2 LINE L2 -4 3268 3204 822 285 128 28 chr2 127100468 127101058 -126155525 - L2 LINE L2 -4 3309 2662 576 306 87 106 chr2 127101180 127102303 -126154280 + L2 LINE L2 1820 2921 -393 21 57 0 0 chr2 127102735 127102770 -126153813 + AT_rich Low_complexity Low_complexity 1 35 0 2132 126 0 0 chr2 127102857 127103151 -126153432 - AluSg SINE Alu -16 294 1 1080 66 0 18 chr2 127104322 127104488 -126152095 + (TTC)n Simple_repeat Simple_repeat 2 164 0 655 110 0 19 chr2 127104897 127105016 -126151567 + L1MA3 LINE L1 5786 5897 -259 25 0 0 0 chr2 127105040 127105065 -126151518 + AT_rich Low_complexity Low_complexity 1 25 0 204 40 0 0 chr2 127105090 127105115 -126151468 + (TG)n Simple_repeat Simple_repeat 1 25 0 21 0 0 0 chr2 127105366 127105387 -126151196 + AT_rich Low_complexity Low_complexity 1 21 0 6046 47 0 3 chr2 127105598 127106343 -126150240 - L1PA5 LINE L1 0 6154 5412 1693 217 47 55 chr2 127107172 127107679 -126148904 - MLT1D LTR MaLR -2 503 1 335 309 102 11 chr2 127107780 127108152 -126148431 + L1MEc LINE L1 3149 3554 -2661 318 278 10 0 chr2 127108173 127108270 -126148313 + L1MEc LINE L1 3703 3800 -2415 219 238 0 0 chr2 127108458 127108521 -126148062 + (TA)n Simple_repeat Simple_repeat 1 63 0 3896 105 4 0 chr2 127108613 127109165 -126147418 + MER41A LTR ERV1 1 554 0 564 146 0 0 chr2 127109398 127109494 -126147089 + MER41A LTR ERV1 459 554 0 2445 59 3 3 chr2 127109716 127110019 -126146564 - AluY SINE Alu -8 303 1 22 56 0 0 chr2 127110482 127110518 -126146065 + AT_rich Low_complexity Low_complexity 1 36 0 1848 160 0 0 chr2 127110526 127110829 -126145754 + AluSx SINE Alu 6 308 0 219 114 0 0 chr2 127111823 127111858 -126144725 + (TC)n Simple_repeat Simple_repeat 2 36 0 234 0 0 0 chr2 127111890 127111916 -126144667 + (TTTTA)n Simple_repeat Simple_repeat 1 26 0 218 294 59 0 chr2 127112777 127112845 -126143738 + L2 LINE L2 3241 3312 -1 197 363 97 0 chr2 127113607 127113720 -126142863 + MIR SINE MIR 81 204 -58 2341 107 0 0 chr2 127113974 127114283 -126142300 + AluSq SINE Alu 1 309 -4 1433 236 25 15 chr2 127114414 127114751 -126141832 + MLT1A1 LTR MaLR 1 405 -23 348 288 25 55 chr2 127116004 127116167 -126140416 + MIR SINE MIR 99 256 -6 2173 49 0 4 chr2 127116570 127116834 -126139749 - AluY SINE Alu -6 305 43 352 225 34 0 chr2 127116897 127116986 -126139597 - MLT1I LTR MaLR -17 392 301 1580 260 70 21 chr2 127117107 127117722 -126138861 - L1ME2 LINE L1 -10 6652 6008 3935 254 61 64 chr2 127117739 127119783 -126136800 - L1ME2 LINE L1 -941 5703 3664 759 212 10 21 chr2 127119783 127119976 -126136607 - L1PB4 LINE L1 -7 6149 5959 3935 254 61 64 chr2 127119976 127120243 -126136340 - L1ME2 LINE L1 -2980 3664 3398 330 242 44 0 chr2 127120388 127120479 -126136104 - L1ME2 LINE L1 -5723 923 829 266 289 35 14 chr2 127120893 127121035 -126135548 - L1ME2 LINE L1 -6383 159 15 469 308 64 8 chr2 127121073 127121430 -126135153 - L1MCa LINE L1 -5117 1309 933 477 357 60 20 chr2 127121769 127122021 -126134562 + MIR SINE MIR 1 262 0 201 167 0 117 chr2 127122034 127122094 -126134489 + MIR SINE MIR 105 157 -105 1901 179 0 0 chr2 127123499 127123796 -126132787 - AluJo SINE Alu -15 297 1 1015 194 223 52 chr2 127123896 127124241 -126132342 + MSTB LTR MaLR 5 408 -20 29 60 0 0 chr2 127124262 127124312 -126132271 + AT_rich Low_complexity Low_complexity 1 50 0 1855 117 62 0 chr2 127124939 127125213 -126131370 + AluSc SINE Alu 1 291 -18 440 217 56 49 chr2 127125462 127125605 -126130978 + LTR8 LTR ERV1 1 144 -547 394 262 146 31 chr2 127125852 127126180 -126130403 + LTR26 LTR ERV1 366 592 -11 31 0 0 0 chr2 127127014 127127045 -126129538 + AT_rich Low_complexity Low_complexity 1 31 0 429 332 37 32 chr2 127127484 127127701 -126128882 - MIR SINE MIR -41 221 4 373 299 30 8 chr2 127128427 127128561 -126128022 - MIR SINE MIR -10 252 116 545 274 98 43 chr2 127129873 127130128 -126126455 - L2 LINE L2 -3 3310 3042 198 242 113 32 chr2 127130364 127130488 -126126095 - MIR3 SINE MIR -68 140 7 29 0 0 0 chr2 127131674 127131703 -126124880 + AT_rich Low_complexity Low_complexity 1 29 0 201 148 66 0 chr2 127131868 127131929 -126124654 + (CATATA)n Simple_repeat Simple_repeat 2 66 0 409 326 38 33 chr2 127132847 127133031 -126123552 + MIR SINE MIR 56 240 -22 189 257 29 57 chr2 127133389 127133459 -126123124 - L3 LINE CR1 -1126 451 384 678 25 0 0 chr2 127133661 127133741 -126122842 + (CTG)n Simple_repeat Simple_repeat 1 80 0 206 0 0 65 chr2 127134567 127134598 -126121985 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 211 237 0 0 chr2 127134908 127134946 -126121637 + L2 LINE L2 3008 3045 -268 1702 207 13 3 chr2 127135048 127135357 -126121226 - AluJb SINE Alu 0 312 1 241 321 12 0 chr2 127136675 127136756 -126119827 + MER94 DNA DNA 39 120 -14 192 314 68 25 chr2 127137526 127137644 -126118939 - MIR3 SINE MIR -78 130 8 5206 19 3 16 chr2 127138419 127139046 -126117537 + L1PA2 LINE L1 5537 6155 0 281 351 93 49 chr2 127139135 127139360 -126117223 - MIR SINE MIR -15 247 13 180 333 107 47 chr2 127139493 127139643 -126116940 - MIR3 SINE MIR -34 174 16 193 196 39 20 chr2 127140003 127140054 -126116529 - L2 LINE L2 0 3313 3262 2288 110 3 0 chr2 127140117 127140426 -126116157 - AluY SINE Alu -1 310 1 1273 185 108 70 chr2 127140806 127141222 -126115361 + MSTB1 LTR MaLR 1 432 0 392 321 0 9 chr2 127141946 127142052 -126114531 + MER5B DNA MER1_type 1 105 -73 2265 71 0 3 chr2 127142090 127142397 -126114186 - AluY SINE Alu 0 306 1 1746 150 41 7 chr2 127142940 127143233 -126113350 + AluSx SINE Alu 1 303 -9 184 216 0 0 chr2 127143536 127143573 -126113010 - MIR SINE MIR -6 256 220 523 205 60 0 chr2 127144398 127144549 -126112034 + MER53 DNA DNA 23 182 -7 266 285 77 46 chr2 127144940 127145070 -126111513 + MIR SINE MIR 112 245 -17 1350 116 70 5 chr2 127146257 127146472 -126110111 - MER30 DNA MER1_type -1 229 1 2187 126 30 0 chr2 127146567 127146868 -126109715 + AluSg SINE Alu 1 310 0 1155 249 73 11 chr2 127147706 127148076 -126108507 - MER63B DNA MER1_type -37 399 7 233 204 52 76 chr2 127148131 127148278 -126108305 - MLT1G LTR MaLR 0 590 416 920 251 62 14 chr2 127148332 127148658 -126107925 - MLT1G LTR MaLR -294 296 1 232 178 0 56 chr2 127149048 127149138 -126107445 + (TATATG)n Simple_repeat Simple_repeat 3 87 0 277 24 48 0 chr2 127149139 127149181 -126107402 + (TAGA)n Simple_repeat Simple_repeat 2 45 0 302 261 0 0 chr2 127149182 127149251 -126107332 - Tigger5 DNA MER2_type -6 2317 2249 656 238 138 0 chr2 127149256 127149445 -126107138 - Tigger5 DNA MER2_type -2108 215 1 2547 45 6 10 chr2 127149913 127150225 -126106358 + AluY SINE Alu 1 311 0 289 321 12 0 chr2 127150247 127150331 -126106252 - L2 LINE L2 -8 3264 3180 504 204 0 0 chr2 127150622 127150725 -126105858 - AluJb SINE Alu -1 311 209 291 335 45 34 chr2 127150731 127150907 -126105676 + MER5B DNA MER1_type 1 178 0 2453 113 6 3 chr2 127150989 127151343 -126105240 - THE1A LTR MaLR 0 355 1 339 235 59 118 chr2 127151402 127151589 -126104994 - MER5B DNA MER1_type -2 176 1 372 264 66 53 chr2 127151744 127151971 -126104612 - Charlie8 DNA MER1_type -2184 233 4 375 142 0 133 chr2 127153219 127153339 -126103244 + MSTD LTR MaLR 262 396 0 3575 173 66 14 chr2 127153339 127154177 -126102406 - L1 LINE L1 -782 5364 4484 536 232 22 33 chr2 127154201 127154254 -126102329 - MER63 DNA MER1_type -135 927 875 2471 103 14 0 chr2 127154254 127154602 -126101981 - THE1A LTR MaLR 0 355 3 10790 115 17 0 chr2 127154605 127156156 -126100427 - THE1A-int LTR MaLR -1 1579 3 536 232 22 33 chr2 127156156 127156279 -126100304 - MER63 DNA MER1_type -189 873 749 2305 124 8 8 chr2 127156301 127156656 -126099927 - THE1A LTR MaLR 0 355 1 305 203 16 0 chr2 127156656 127156720 -126099863 + L1M3 LINE L1 5646 5710 -624 10287 228 20 18 chr2 127206738 127209556 -126047027 + L1PA13 LINE L1 1878 4683 -2166 1973 188 32 34 chr2 127209556 127210105 -126046478 - MLT2A2 LTR ERVL 0 554 1 2187 182 7 2 chr2 127210109 127210521 -126046062 + L1PA13 LINE L1 4684 5097 -1752 4537 175 17 4 chr2 127210657 127211920 -126044663 + L1PA13 LINE L1 5103 6376 -490 292 135 0 19 chr2 127211930 127211982 -126044601 - L1P LINE L1 -2115 4031 3981 795 114 0 8 chr2 127211986 127212109 -126044474 + MLT2A2 LTR ERVL 1 122 -331 1013 145 0 0 chr2 127212111 127212270 -126044313 + L1PA13 LINE L1 6386 6544 -322 3550 137 27 6 chr2 127212270 127212884 -126043699 + L1PA14 LINE L1 5527 6161 0 863 149 14 0 chr2 127212885 127213026 -126043557 - MLT1E3 LTR MaLR -481 143 1 191 422 0 0 chr2 127213148 127213238 -126043345 - L2 LINE L2 -6 3266 3177 413 110 14 0 chr2 127213339 127213412 -126043171 + (TA)n Simple_repeat Simple_repeat 1 74 0 471 294 157 5 chr2 127215611 127215808 -126040775 + LTR16C LTR ERVL 1 227 -264 3250 150 35 3 chr2 127216149 127216756 -126039827 + L1PBa LINE L1 1723 2348 -4515 * 5800 212 32 23 chr2 127216752 127218235 -126038348 + L1 LINE L1 3005 4501 -2361 408 247 11 0 chr2 127219124 127219213 -126037370 - MER21B LTR ERV1 -773 90 1 242 246 0 14 chr2 127219355 127219424 -126037159 + L1M4 LINE L1 2764 2831 -3315 245 224 24 24 chr2 127219487 127219572 -126037011 + L1M4 LINE L1 3345 3429 -2717 3779 158 110 45 chr2 127220190 127220998 -126035585 + MER4D LTR ERV1 10 870 -2 566 202 0 25 chr2 127221419 127221538 -126035045 - MER21B LTR ERV1 -554 309 194 303 201 114 0 chr2 127221656 127221741 -126034842 + L1ME LINE L1 5693 5766 -355 553 66 99 0 chr2 127221741 127221832 -126034751 + L1MB4 LINE L1 6079 6178 -2 303 201 114 0 chr2 127221832 127221909 -126034674 + L1ME LINE L1 5766 5857 -264 1404 178 28 12 chr2 127222144 127222397 -126034186 + AluJb SINE Alu 22 278 -34 208 320 137 26 chr2 127222733 127222886 -126033697 + L2 LINE L2 3130 3299 -14 442 330 139 35 chr2 127223138 127223571 -126033012 - L3 LINE CR1 -138 1439 962 374 96 0 0 chr2 127224613 127224665 -126031918 - MADE1 DNA Mariner -1 79 28 358 82 0 0 chr2 127224679 127224728 -126031855 + MADE1 DNA Mariner 31 79 -1 297 51 0 0 chr2 127224874 127224913 -126031670 + (TTTTTG)n Simple_repeat Simple_repeat 3 41 0 2562 152 68 34 chr2 127225262 127225788 -126030795 - MER34B LTR ERV1 -18 547 4 266 262 35 121 chr2 127226176 127226317 -126030266 - L2 LINE L2 -1 3312 3184 207 100 0 0 chr2 127226745 127226775 -126029808 + (TC)n Simple_repeat Simple_repeat 1 30 0 3493 143 26 2 chr2 127227693 127228351 -126028232 + MER50 LTR ERV1 9 714 -20 4159 144 33 32 chr2 127228385 127229163 -126027420 + MER4E LTR ERV1 1 779 0 210 281 18 18 chr2 127229414 127229471 -126027112 - MIR SINE MIR -115 93 37 848 232 113 81 chr2 127230326 127231024 -126025559 + MER21B LTR ERV1 17 779 -84 244 260 80 20 chr2 127231031 127231131 -126025452 + MIR SINE MIR 107 212 -50 198 0 0 0 chr2 127232397 127232419 -126024164 + (T)n Simple_repeat Simple_repeat 1 22 0 344 308 75 0 chr2 127233353 127233473 -126023110 + MIR3 SINE MIR 37 165 -43 325 365 22 7 chr2 127233566 127233703 -126022880 + MIR SINE MIR 90 228 -34 263 213 13 0 chr2 127234149 127234224 -126022359 + (TATG)n Simple_repeat Simple_repeat 3 78 0 2109 132 7 0 chr2 127234316 127234612 -126021971 - AluSx SINE Alu -14 298 1 23 54 0 0 chr2 127234663 127234700 -126021883 + AT_rich Low_complexity Low_complexity 1 37 0 35 71 0 0 chr2 127235682 127235752 -126020831 + AT_rich Low_complexity Low_complexity 1 70 0 898 312 84 29 chr2 127236922 127237399 -126019184 + LTR33 LTR ERVL 19 521 0 2029 117 0 23 chr2 127238562 127238861 -126017722 - AluSq SINE Alu -21 292 1 32 26 0 0 chr2 127242464 127242503 -126014080 + AT_rich Low_complexity Low_complexity 1 39 0 69 81 0 0 chr2 127242555 127242715 -126013868 + AT_rich Low_complexity Low_complexity 1 160 0 995 92 31 28 chr2 127243490 127243799 -126012784 + (TCTA)n Simple_repeat Simple_repeat 1 492 0 215 303 13 26 chr2 127243900 127243976 -126012607 - L2 LINE L2 -195 3077 3003 297 298 49 36 chr2 127244942 127245149 -126011434 - L1ME LINE L1 -333 5829 5618 23 0 0 0 chr2 127245884 127245907 -126010676 + AT_rich Low_complexity Low_complexity 1 23 0 1285 95 42 0 chr2 127245978 127246167 -126010416 + MER107 DNA MER1_type 1 197 0 1066 186 70 0 chr2 127246493 127246692 -126009891 - MER20 DNA MER1_type -5 214 2 2244 178 68 2 chr2 127246744 127247182 -126009401 - LTR24 LTR ERV1 0 467 1 479 317 113 9 chr2 127247825 127248046 -126008537 + L2 LINE L2 2090 2333 -981 189 0 0 0 chr2 127248106 127248127 -126008456 + (TC)n Simple_repeat Simple_repeat 1 21 0 * 198 0 0 0 chr2 127248126 127248148 -126008435 + (CA)n Simple_repeat Simple_repeat 1 22 0 253 146 146 0 chr2 127248721 127248776 -126007807 + MLT1A2 LTR MaLR 310 372 -2 2049 152 0 0 chr2 127249957 127250267 -126006316 - AluSx SINE Alu 0 312 3 862 272 83 43 chr2 127250669 127251044 -126005539 - MLT1B LTR MaLR 0 390 1 252 86 0 0 chr2 127251881 127251916 -126004667 + (T)n Simple_repeat Simple_repeat 1 35 0 3986 184 17 26 chr2 127252406 127252535 -126004048 - L1MB1 LINE L1 0 6168 6039 2122 128 72 17 chr2 127252535 127252880 -126003703 + THE1B LTR MaLR 1 364 0 3986 184 17 26 chr2 127252880 127253592 -126002991 - L1MB1 LINE L1 -129 6039 5335 805 168 0 109 chr2 127253625 127253638 -126002945 + AluJo SINE Alu 120 133 -179 234 0 0 0 chr2 127253638 127253664 -126002919 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 805 168 0 109 chr2 127253664 127253852 -126002731 + AluJo SINE Alu 133 299 -13 24 67 0 0 chr2 127253853 127253898 -126002685 + AT_rich Low_complexity Low_complexity 1 45 0 2615 274 58 54 chr2 127253898 127256027 -126000556 - L1M1 LINE L1 -4298 1672 3 219 69 0 0 chr2 127256083 127256112 -126000471 + (A)n Simple_repeat Simple_repeat 1 29 0 283 148 0 56 chr2 127256113 127256167 -126000416 + L1M3d LINE L1 3 53 -5838 * 1241 288 71 16 chr2 127256150 127256755 -125999828 - L1M3c LINE L1 -4605 1536 899 485 348 48 60 chr2 127256872 127257291 -125999292 - L1M3c LINE L1 -5477 654 241 4422 200 60 13 chr2 127257617 127259478 -125997105 + L1PA16 LINE L1 4208 6158 -8 1567 276 30 34 chr2 127260256 127260821 -125995762 - MER92B LTR ERV1 -73 563 1 2038 202 5 14 chr2 127260826 127261261 -125995322 - L1 LINE L1 -1053 5093 4663 1732 157 7 102 chr2 127261251 127261588 -125994995 + L1MB3 LINE L1 5141 5415 -768 * 1736 155 163 19 chr2 127261588 127261962 -125994621 + MSTA LTR MaLR 1 428 0 1732 157 7 102 chr2 127261962 127262172 -125994411 + L1MB3 LINE L1 5415 5643 -540 2213 177 91 6 chr2 127262441 127262916 -125993667 + L1MB3 LINE L1 5660 6174 -9 415 338 129 12 chr2 127262928 127263262 -125993321 + L1M4 LINE L1 3198 3570 -2576 18123 126 18 12 chr2 127263540 127269988 -125986595 + L1PA8 LINE L1 5 6487 0 22 70 0 0 chr2 127270565 127270608 -125985975 + AT_rich Low_complexity Low_complexity 1 43 0 426 255 55 99 chr2 127271773 127272177 -125984406 + L1MEd LINE L1 819 1204 -4915 275 279 66 40 chr2 127272274 127272500 -125984083 + HAL1 LINE L1 1437 1668 -839 21 89 0 0 chr2 127272558 127272614 -125983969 + AT_rich Low_complexity Low_complexity 1 56 0 306 251 194 40 chr2 127272749 127272976 -125983607 - MIR SINE MIR 0 262 1 22 35 0 0 chr2 127273392 127273421 -125983162 + AT_rich Low_complexity Low_complexity 1 29 0 7030 51 18 0 chr2 127273421 127274624 -125981959 - L1PA5 LINE L1 -3 6151 4938 6631 23 0 0 chr2 127274624 127275403 -125981180 + L1PA5 LINE L1 4178 4956 -1190 2668 20 0 0 chr2 127275403 127275709 -125980874 + L1P LINE L1 3876 4181 -1965 2198 250 2 9 chr2 127275709 127276266 -125980317 - L1 LINE L1 -3380 2766 2214 4354 170 20 2 chr2 127276276 127277122 -125979461 + L1MA5 LINE L1 5435 6295 -5 25 51 0 0 chr2 127277160 127277199 -125979384 + AT_rich Low_complexity Low_complexity 1 39 0 376 155 82 10 chr2 127277204 127277301 -125979282 + L1MA10 LINE L1 6228 6331 -3 24 53 0 0 chr2 127277607 127277645 -125978938 + AT_rich Low_complexity Low_complexity 1 38 0 235 98 0 164 chr2 127278408 127278469 -125978114 + MLT1H LTR MaLR 240 290 -259 281 191 0 131 chr2 127278631 127278715 -125977868 + MLT1H LTR MaLR 475 547 -2 1211 210 42 72 chr2 127278957 127279343 -125977240 + MLT1A2 LTR MaLR 1 374 0 2018 133 51 23 chr2 127279449 127279803 -125976780 + THE1B LTR MaLR 1 364 0 11024 115 6 1 chr2 127279807 127281376 -125975207 + THE1B-int LTR MaLR 5 1580 0 2052 163 8 35 chr2 127281376 127281750 -125974833 + THE1B LTR MaLR 1 364 0 521 304 85 22 chr2 127281817 127282041 -125974542 + LTR16A LTR ERVL 206 443 -7 754 256 55 41 chr2 127282440 127282803 -125973780 - L1ME4a LINE L1 -174 5947 5580 211 245 112 32 chr2 127283960 127284087 -125972496 + MIR SINE MIR 102 248 -14 204 361 0 0 chr2 127285358 127285419 -125971164 + MIR SINE MIR 46 106 -156 2032 199 42 26 chr2 127285458 127285489 -125971094 - MLT2C2 LTR ERVL 0 464 435 654 25 0 0 chr2 127285489 127285569 -125971014 + (TAGA)n Simple_repeat Simple_repeat 2 81 0 2032 199 42 26 chr2 127285569 127285994 -125970589 - MLT2C2 LTR ERVL -29 435 1 297 270 139 11 chr2 127286346 127286484 -125970099 + MIR SINE MIR 19 173 -64 428 313 69 18 chr2 127289514 127289731 -125966852 + MIR SINE MIR 34 261 -1 596 291 23 6 chr2 127290443 127290615 -125965968 + MIR SINE MIR 66 240 -22 1641 149 36 29 chr2 127290745 127291054 -125965529 + Tigger2a DNA MER2_type 1 311 -123 2337 181 6 23 chr2 127291487 127291958 -125964625 - MLT1C LTR MaLR 0 467 5 24 0 0 0 chr2 127291990 127292014 -125964569 + AT_rich Low_complexity Low_complexity 1 24 0 230 294 126 21 chr2 127293180 127293222 -125963361 - MIR SINE MIR -56 206 170 2044 130 14 0 chr2 127293222 127293514 -125963069 + AluSg SINE Alu 1 296 -14 230 294 126 21 chr2 127293514 127293614 -125962969 - MIR SINE MIR -92 170 49 513 288 26 7 chr2 127294593 127294746 -125961837 + MIR SINE MIR 12 167 -95 374 381 82 21 chr2 127294843 127295370 -125961213 + L2 LINE L2 1155 1713 -1601 30 0 0 0 chr2 127295392 127295422 -125961161 + AT_rich Low_complexity Low_complexity 1 30 0 310 313 144 37 chr2 127296313 127296722 -125959861 - L2 LINE L2 -969 2345 1893 181 241 0 56 chr2 127297152 127297206 -125959377 + L2 LINE L2 3257 3307 -6 1195 239 98 34 chr2 127298550 127298989 -125957594 - MLT1C LTR MaLR 0 467 1 396 324 44 20 chr2 127299572 127299915 -125956668 + L1ME4a LINE L1 5509 5859 -262 222 164 55 36 chr2 127299916 127299971 -125956612 - L2 LINE L2 -537 2777 2722 8061 215 94 57 chr2 127300033 127303418 -125953165 + L1PB1 LINE L1 6 3264 -3603 2058 108 45 3 chr2 127303418 127303706 -125952877 + AluSp SINE Alu 1 300 -13 8061 215 94 57 chr2 127303706 127304641 -125951942 + L1PB1 LINE L1 3264 4163 -2704 1084 96 0 7 chr2 127304641 127304787 -125951796 + AluSg/x SINE Alu 164 308 -4 8061 215 94 57 chr2 127304787 127306610 -125949973 + L1PB1 LINE L1 4163 6517 -350 241 107 18 18 chr2 127306627 127306683 -125949900 + (TA)n Simple_repeat Simple_repeat 2 57 0 2165 155 11 5 chr2 127306688 127307063 -125949520 + L1PB1 LINE L1 6491 6867 0 518 239 45 8 chr2 127307103 127307237 -125949346 - LTR16C LTR ERVL -3 488 350 1715 197 100 39 chr2 127307355 127307837 -125948746 - L1ME1 LINE L1 -76 6090 5580 662 341 28 14 chr2 127307840 127308124 -125948459 - LTR16C LTR ERVL -164 327 40 364 323 21 0 chr2 127308355 127308451 -125948132 - MIR SINE MIR -164 98 1 31 58 0 0 chr2 127308715 127308767 -125947816 + AT_rich Low_complexity Low_complexity 1 52 0 400 172 44 74 chr2 127308767 127308903 -125947680 - L1MA7 LINE L1 -10 6302 6167 241 420 53 13 chr2 127310219 127310369 -125946214 - L2 LINE L2 -10 3262 3107 670 257 15 20 chr2 127310724 127310926 -125945657 + MIR SINE MIR 57 257 -5 454 301 79 54 chr2 127311064 127311209 -125945374 - L2 LINE L2 -1 3312 3172 198 0 0 0 chr2 127311209 127311231 -125945352 + (TG)n Simple_repeat Simple_repeat 1 22 0 454 301 79 54 chr2 127311231 127311818 -125944765 - L2 LINE L2 -141 3172 2524 2255 100 0 0 chr2 127311869 127312169 -125944414 - AluSx SINE Alu -12 300 1 1053 184 121 69 chr2 127313135 127313558 -125943025 - LTR56 LTR ERV1 0 445 1 215 329 68 0 chr2 127313676 127313749 -125942834 - MIR SINE MIR -90 118 41 781 200 35 12 chr2 127314457 127314627 -125941956 + MER101B LTR ERV1 3 176 -394 2157 190 60 52 chr2 127315113 127315614 -125940969 + MLT1D LTR MaLR 1 505 0 248 211 19 0 chr2 127316509 127316561 -125940022 + MER3 DNA MER1_type 155 207 -2 245 258 110 93 chr2 127317073 127317255 -125939328 - MIR3 SINE MIR -18 190 6 432 309 44 39 chr2 127317490 127317671 -125938912 - MIR SINE MIR -55 207 26 182 271 71 29 chr2 127317874 127317944 -125938639 + MIR3 SINE MIR 6 78 -130 181 258 113 32 chr2 127318138 127318200 -125938383 - MER5B DNA MER1_type -94 84 18 381 332 67 5 chr2 127318809 127319002 -125937581 + L1ME4a LINE L1 5703 5907 -214 2666 284 126 12 chr2 127319075 127319881 -125936702 + LTR57-int LTR ERVL 27 981 -4673 333 0 0 0 chr2 127319881 127319918 -125936665 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 2666 284 126 12 chr2 127319918 127320162 -125936421 + LTR57-int LTR ERVL 981 1196 -4458 459 231 9 19 chr2 127320163 127320271 -125936312 + LTR57-int LTR ERVL 1123 1229 -4535 684 177 16 0 chr2 127320278 127320402 -125936181 + LTR57-int LTR ERVL 3817 3942 -1822 * 1704 212 31 3 chr2 127320394 127320748 -125935835 + LTR57-int LTR ERVL 1229 1592 -4172 908 141 27 0 chr2 127320738 127320887 -125935696 + LTR57-int LTR ERVL 2670 2822 -2942 * 1065 175 19 0 chr2 127320892 127321098 -125935485 - Tigger1 DNA MER2_type -2 2416 2207 791 222 67 6 chr2 127321067 127321247 -125935336 - Tigger1 DNA MER2_type -2227 191 1 * 8701 177 22 37 chr2 127321247 127322894 -125933689 + LTR57-int LTR ERVL 2824 4446 -1318 239 338 0 0 chr2 127322908 127322979 -125933604 - MIR SINE MIR -99 163 93 299 332 67 22 chr2 127323486 127323799 -125932784 - L1 LINE L1 -1812 4334 4008 445 241 37 0 chr2 127323831 127323939 -125932644 + MIR SINE MIR 136 247 -15 326 222 0 0 chr2 127324010 127324073 -125932510 + MIR SINE MIR 189 251 -11 21 57 0 0 chr2 127324424 127324459 -125932124 + AT_rich Low_complexity Low_complexity 1 35 0 471 288 114 79 chr2 127324709 127325351 -125931232 - L1 LINE L1 -2807 3339 2676 395 116 0 0 chr2 127325692 127325761 -125930822 - L1MA10 LINE L1 -1 6333 6265 2660 232 60 14 chr2 127325762 127326522 -125930061 + L1 LINE L1 4150 4944 -1202 510 280 199 34 chr2 127327094 127327622 -125928961 - HAL1b LINE L1 -457 891 277 22 35 0 0 chr2 127327840 127327869 -125928714 + AT_rich Low_complexity Low_complexity 1 29 0 1775 154 7 14 chr2 127327869 127328161 -125928422 - AluSx SINE Alu -22 290 1 661 260 62 0 chr2 127328162 127328308 -125928275 - FRAM SINE Alu -12 164 10 22 0 0 0 chr2 127328645 127328667 -125927916 + AT_rich Low_complexity Low_complexity 1 22 0 3587 150 26 2 chr2 127329467 127330054 -125926529 + LTR26 LTR ERV1 1 601 -2 499 261 143 44 chr2 127330384 127330656 -125925927 + LOR1-int LTR ERV1 416 714 -5549 * 987 266 26 9 chr2 127330632 127330911 -125925672 + LOR1-int LTR ERV1 662 907 -5039 956 176 69 5 chr2 127330977 127331181 -125925402 + LTR57-int LTR ERVL 289 505 -4838 5763 158 64 73 chr2 127331181 127332614 -125923969 + LOR1-int LTR ERV1 786 2231 -4367 2423 66 0 35 chr2 127332614 127332933 -125923650 + AluY SINE Alu 1 308 -3 5763 158 64 73 chr2 127332933 127333080 -125923503 + LOR1-int LTR ERV1 2231 2378 -4220 526 14 55 0 chr2 127333080 127333153 -125923430 + (TTTTA)n Simple_repeat Simple_repeat 4 80 0 5763 158 64 73 chr2 127333153 127333323 -125923260 + LOR1-int LTR ERV1 2378 3730 -2868 1097 166 58 35 chr2 127333395 127333813 -125922770 + LOR1-int LTR ERV1 3734 4183 -2148 1496 137 34 102 chr2 127333986 127334370 -125922213 + LOR1-int LTR ERV1 3763 6154 -604 270 179 0 18 chr2 127334404 127334460 -125922123 + LOR1-int LTR ERV1 6384 6438 -320 1366 184 4 12 chr2 127334477 127334721 -125921862 + LOR1-int LTR ERV1 6852 7093 -1027 874 174 81 0 chr2 127334727 127334876 -125921707 + LTR26 LTR ERV1 443 603 0 203 386 32 13 chr2 127334904 127335062 -125921521 - L2 LINE L2 -222 3091 2931 493 259 46 27 chr2 127335537 127335737 -125920846 - MIR SINE MIR -57 205 2 187 305 203 8 chr2 127336542 127336660 -125919923 - L2 LINE L2 -25 3247 3107 2191 93 0 81 chr2 127337405 127337737 -125918846 + AluSp SINE Alu 1 305 -8 183 80 0 0 chr2 127337801 127337826 -125918757 + (CAA)n Simple_repeat Simple_repeat 3 27 0 785 191 28 98 chr2 127337937 127338152 -125918431 + MER20 DNA MER1_type 19 218 -1 607 158 0 0 chr2 127338327 127338428 -125918155 - FRAM SINE Alu -17 159 59 2150 106 30 16 chr2 127339048 127339351 -125917232 + AluSx SINE Alu 1 307 -5 293 318 54 23 chr2 127339901 127340030 -125916553 - L2 LINE L2 -230 3042 2910 488 270 178 19 chr2 127340035 127340294 -125916289 - L1MC4a LINE L1 -1816 5992 5693 689 317 74 67 chr2 127340400 127341472 -125915111 - L1MC4a LINE L1 -1262 4884 3806 581 300 126 43 chr2 127341523 127342246 -125914337 - L1MC4a LINE L1 -2480 3666 2884 253 385 96 22 chr2 127342473 127342930 -125913653 - L2 LINE L2 -759 2555 2065 2146 123 3 7 chr2 127343817 127344127 -125912456 + AluSc SINE Alu 1 309 0 2218 95 3 0 chr2 127346448 127346744 -125909839 - AluY SINE Alu -13 298 2 242 267 17 0 chr2 127346792 127346852 -125909731 - MIR SINE MIR -19 243 183 207 0 0 0 chr2 127346930 127346953 -125909630 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 30 27 0 0 chr2 127347275 127347312 -125909271 + AT_rich Low_complexity Low_complexity 1 37 0 195 42 0 0 chr2 127347430 127347454 -125909129 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 2226 105 3 0 chr2 127348081 127348376 -125908207 + AluSg SINE Alu 1 296 -14 324 250 47 39 chr2 127348693 127348821 -125907762 + MIR3 SINE MIR 74 202 -6 2484 254 60 43 chr2 127349365 127350153 -125906430 - MER21B LTR ERV1 -51 812 12 954 122 0 0 chr2 127350482 127350630 -125905953 + (TCCCC)n Simple_repeat Simple_repeat 4 151 0 530 326 58 30 chr2 127350712 127351040 -125905543 - MLT1I LTR MaLR -3 406 70 194 361 0 36 chr2 127351178 127351261 -125905322 - L2 LINE L2 -6 3266 3187 746 182 0 14 chr2 127351374 127351812 -125904771 + (TG)n Simple_repeat Simple_repeat 1 431 0 222 291 0 18 chr2 127351945 127352000 -125904583 + L2 LINE L2 3194 3247 -66 2396 102 0 0 chr2 127352425 127352738 -125903845 + AluSq SINE Alu 1 313 0 187 338 14 14 chr2 127353270 127353341 -125903242 - L2 LINE L2 -8 3264 3194 338 276 201 39 chr2 127355451 127355730 -125900853 - L2 LINE L2 -683 2631 2308 210 304 51 13 chr2 127356556 127356635 -125899948 - MIR SINE MIR -80 128 47 236 233 100 0 chr2 127357630 127357690 -125898893 + MER97b DNA MER1_type? 98 163 -890 237 33 0 0 chr2 127357745 127357775 -125898808 + (ATTG)n Simple_repeat Simple_repeat 2 31 0 1886 125 35 28 chr2 127357777 127358064 -125898519 - AluSx SINE Alu -22 290 2 525 307 72 68 chr2 127358246 127358719 -125897864 + L2 LINE L2 2828 3302 -11 2150 121 0 3 chr2 127359231 127359528 -125897055 - AluSg SINE Alu -14 296 1 214 27 0 54 chr2 127359655 127359692 -125896891 + (TTA)n Simple_repeat Simple_repeat 1 35 0 358 286 95 16 chr2 127359873 127359999 -125896584 - L2 LINE L2 -1 3271 3136 219 348 93 25 chr2 127360354 127360515 -125896068 + MIR3 SINE MIR 26 197 -11 30 27 0 0 chr2 127360569 127360606 -125895977 + AT_rich Low_complexity Low_complexity 1 37 0 26 82 0 0 chr2 127361638 127361699 -125894884 + AT_rich Low_complexity Low_complexity 1 61 0 263 253 63 42 chr2 127361968 127362063 -125894520 - MIR SINE MIR -75 187 91 1139 191 27 27 chr2 127362070 127362237 -125894346 + L1MA6 LINE L1 6034 6203 -97 2180 169 43 29 chr2 127362237 127362657 -125893926 + MSTB LTR MaLR 1 426 0 1139 191 27 27 chr2 127362657 127362751 -125893832 + L1MA6 LINE L1 6202 6295 -5 21 36 0 0 chr2 127362848 127362876 -125893707 + AT_rich Low_complexity Low_complexity 1 28 0 285 54 54 0 chr2 127363939 127363995 -125892588 + T-rich Low_complexity Low_complexity 2 60 0 1763 160 4 4 chr2 127363997 127364278 -125892305 - AluJb SINE Alu -31 281 1 764 215 43 0 chr2 127364892 127365055 -125891528 + MER47A DNA MER2_type 1 170 -196 475 153 0 47 chr2 127365483 127365568 -125891015 - L1P3 LINE L1 -6380 81 1 3604 68 45 0 chr2 127365569 127366053 -125890530 + L1PA8 LINE L1 5667 6172 0 665 154 0 0 chr2 127366063 127366167 -125890416 - AluJb SINE Alu -208 104 1 297 266 73 60 chr2 127367960 127368178 -125888405 - L1MC5 LINE L1 -36 7925 7705 258 283 0 20 chr2 127368312 127368411 -125888172 - L1MC5 LINE L1 -389 7572 7476 388 342 30 30 chr2 127369049 127369286 -125887297 - L2 LINE L2 -479 2835 2599 198 337 20 20 chr2 127369280 127369381 -125887202 - MIR3 SINE MIR -8 200 100 * 27 29 0 0 chr2 127369418 127369452 -125887131 + AT_rich Low_complexity Low_complexity 1 34 0 325 167 28 14 chr2 127369955 127370027 -125886556 + MER116 DNA Mariner 1 73 -7 244 347 48 24 chr2 127370234 127370358 -125886225 + L2 LINE L2 3146 3272 0 571 324 97 0 chr2 127370426 127370633 -125885950 + MIR SINE MIR 26 252 -10 333 0 0 0 chr2 127370683 127370720 -125885863 + (TG)n Simple_repeat Simple_repeat 2 38 0 292 339 71 18 chr2 127371486 127371598 -125884985 + L2 LINE L2 3155 3272 0 35 41 0 0 chr2 127372984 127373033 -125883550 + AT_rich Low_complexity Low_complexity 1 49 0 346 320 47 7 chr2 127373536 127373686 -125882897 - MIR SINE MIR -65 197 42 2230 75 4 0 chr2 127375641 127375946 -125880637 - AluY SINE Alu 0 306 1 228 240 0 0 chr2 127376296 127376346 -125880237 - MER58 DNA MER1_type 0 2420 2371 869 254 108 4 chr2 127376351 127376591 -125879992 - MER58 DNA MER1_type -2155 265 1 2100 87 4 0 chr2 127377397 127377662 -125878921 - AluSg SINE Alu -7 303 38 859 256 76 41 chr2 127378524 127379009 -125877574 + MLT1E2 LTR MaLR 101 505 0 460 251 36 48 chr2 127379052 127379219 -125877364 + LTR16B LTR ERVL 134 298 -166 196 329 79 36 chr2 127379688 127379828 -125876755 - MER5A DNA MER1_type -1 188 43 1110 233 5 72 chr2 127382114 127382487 -125874096 + L1MB7 LINE L1 8 355 -6187 2241 262 49 15 chr2 127382487 127383366 -125873217 + L1MB7 LINE L1 3500 4463 -2181 951 240 31 108 chr2 127383373 127383779 -125872804 + MLT1A2 LTR MaLR 1 467 0 3273 246 45 21 chr2 127383785 127383969 -125872614 + L1MB7 LINE L1 4467 4645 -2037 198 0 0 0 chr2 127383969 127383991 -125872592 + (TAAA)n Simple_repeat Simple_repeat 4 25 0 3273 246 45 21 chr2 127383991 127385899 -125870684 + L1MB7 LINE L1 4645 6662 -20 700 288 22 27 chr2 127385938 127386160 -125870423 - MIR SINE MIR -41 221 1 209 234 21 0 chr2 127386208 127386255 -125870328 + L3b LINE CR1 1526 1573 -10 229 290 135 63 chr2 127386391 127386598 -125869985 + MIR SINE MIR 19 240 -22 206 347 32 24 chr2 127386651 127386775 -125869808 + L2 LINE L2 2029 2153 -1161 1253 323 44 15 chr2 127386896 127387373 -125869210 + L2 LINE L2 2390 2880 -434 570 246 0 8 chr2 127387376 127387506 -125869077 + LTR16C LTR ERVL 350 478 -13 335 313 0 0 chr2 127389563 127389646 -125866937 + HERVL LTR ERVL 4106 4188 -1466 507 318 49 34 chr2 127389920 127390354 -125866229 + LTR16C LTR ERVL 1 488 -3 1374 186 7 18 chr2 127391199 127391473 -125865110 - L1M2 LINE L1 -565 5747 5477 408 289 16 16 chr2 127392856 127392977 -125863606 + L2 LINE L2 3190 3310 -3 596 284 43 19 chr2 127393093 127393304 -125863279 - MIR SINE MIR -21 241 26 28 95 0 0 chr2 127393382 127393466 -125863117 + AT_rich Low_complexity Low_complexity 1 84 0 38 39 0 0 chr2 127393527 127393579 -125863004 + AT_rich Low_complexity Low_complexity 1 52 0 334 376 92 23 chr2 127393591 127394025 -125862558 + L1M4 LINE L1 3689 4152 -1994 21 0 0 0 chr2 127394161 127394182 -125862401 + AT_rich Low_complexity Low_complexity 1 21 0 258 261 78 13 chr2 127394776 127394929 -125861654 + L1MCc LINE L1 1303 1465 -4958 645 304 153 74 chr2 127394931 127395486 -125861097 + L1MCc LINE L1 1663 2302 -4680 1137 125 5 67 chr2 127396591 127396790 -125859793 - Tigger1 DNA MER2_type -6 2412 2227 2035 136 0 0 chr2 127396790 127397077 -125859506 + AluSg SINE Alu 2 288 -22 1137 125 5 67 chr2 127397077 127397101 -125859482 - Tigger1 DNA MER2_type -191 2227 2203 833 176 13 25 chr2 127397091 127397250 -125859333 - Tigger1 DNA MER2_type -2261 157 1 * 4270 98 8 23 chr2 127397981 127398625 -125857958 - MER41B LTR ERV1 0 635 2 947 215 22 153 chr2 127399574 127400026 -125856557 - MSTD LTR MaLR 0 396 4 351 0 0 0 chr2 127400976 127401015 -125855568 + (TG)n Simple_repeat Simple_repeat 2 40 0 25 51 0 0 chr2 127401040 127401079 -125855504 + AT_rich Low_complexity Low_complexity 1 39 0 21 36 0 0 chr2 127401976 127402004 -125854579 + AT_rich Low_complexity Low_complexity 1 28 0 1415 236 63 42 chr2 127402806 127403490 -125853093 + L1ME1 LINE L1 4987 5677 -489 565 222 53 91 chr2 127403490 127403628 -125852955 + L1ME1 LINE L1 5915 6042 -124 2018 100 0 31 chr2 127403628 127403917 -125852666 + AluSx SINE Alu 28 307 -5 565 222 53 91 chr2 127403917 127404021 -125852562 + L1ME1 LINE L1 6042 6148 -18 480 337 89 8 chr2 127404596 127404842 -125851741 + L3 LINE CR1 597 862 -715 186 320 119 46 chr2 127404943 127405137 -125851446 + L3 LINE CR1 858 1065 -512 195 186 0 0 chr2 127405185 127405228 -125851355 + (TG)n Simple_repeat Simple_repeat 2 44 0 23 24 0 24 chr2 127405310 127405339 -125851244 + AT_rich Low_complexity Low_complexity 1 30 -10 2079 135 0 0 chr2 127405339 127405628 -125850955 + AluSq SINE Alu 1 289 -24 23 24 0 24 chr2 127405628 127405639 -125850944 + AT_rich Low_complexity Low_complexity 30 40 0 213 282 12 35 chr2 127405642 127405727 -125850856 - L2 LINE L2 -4 3309 3227 2029 114 0 17 chr2 127406634 127406923 -125849660 - AluSc SINE Alu -15 294 11 2508 122 3 3 chr2 127407917 127408294 -125848289 + L1PA13 LINE L1 5787 6163 0 24 77 0 0 chr2 127409494 127409546 -125847037 + AT_rich Low_complexity Low_complexity 1 52 0 872 220 153 29 chr2 127409730 127410084 -125846499 + MER39 LTR ERV1 250 653 0 239 333 71 104 chr2 127410156 127410465 -125846118 - L2 LINE L2 -47 3225 2927 506 285 65 28 chr2 127411860 127412074 -125844509 - MIR SINE MIR -12 250 29 963 224 20 56 chr2 127412399 127412702 -125843881 - L1MA9 LINE L1 -38 6274 5983 477 165 0 62 chr2 127412715 127412812 -125843771 - L1MA9 LINE L1 -418 5894 5804 226 217 17 0 chr2 127412907 127412967 -125843616 - L1MA9 LINE L1 -561 5773 5713 322 369 112 16 chr2 127413788 127414154 -125842429 + L3 LINE CR1 461 861 -716 678 231 105 54 chr2 127414950 127415227 -125841356 + MLT1I LTR MaLR 1 291 -118 897 238 150 23 chr2 127415467 127415902 -125840681 - LTR1B LTR ERV1 -283 502 10 2653 187 42 2 chr2 127415902 127416454 -125840129 - HUERS-P2 LTR ERV1 -13 3075 2467 * 3894 187 20 19 chr2 127416453 127417085 -125839498 - HUERS-P2 LTR ERV1 -1707 1381 746 2075 126 0 26 chr2 127417085 127417394 -125839189 + AluSq SINE Alu 1 301 -12 3894 187 20 19 chr2 127417394 127417498 -125839085 - HUERS-P2 LTR ERV1 -2342 746 644 642 175 7 77 chr2 127417497 127417640 -125838943 - HUERS-P2 LTR ERV1 -2954 134 2 * 271 253 154 44 chr2 127417664 127417846 -125838737 - LTR28 LTR ERV1 -15 1005 804 818 247 96 62 chr2 127417868 127418317 -125838266 - LTR1B LTR ERV1 -333 493 30 * 1729 241 90 46 chr2 127418310 127418900 -125837683 - MLT1E3 LTR MaLR -8 616 1 548 206 26 101 chr2 127419823 127420090 -125836493 - L1M4 LINE L1 -2650 3496 3250 5238 128 11 53 chr2 127420094 127420467 -125836116 + MER4D LTR ERV1 7 394 -509 2202 120 0 19 chr2 127420467 127420783 -125835800 - AluSg SINE Alu 0 310 1 5238 128 11 53 chr2 127420783 127421346 -125835237 + MER4D LTR ERV1 394 903 0 1144 226 51 49 chr2 127421350 127421761 -125834822 - MER92A LTR ERV1 0 412 1 2476 256 47 40 chr2 127421768 127422236 -125834347 - L1M4 LINE L1 -2898 3248 2785 2080 179 18 0 chr2 127422236 127422632 -125833951 - MER57A LTR ERV1 0 403 1 2476 256 47 40 chr2 127422632 127423224 -125833359 - L1M4 LINE L1 -3361 2785 2181 1458 246 46 54 chr2 127423256 127423578 -125833005 + MLT1D LTR MaLR 13 331 -174 1152 107 12 0 chr2 127423578 127423746 -125832837 + L1PA6 LINE L1 5982 6151 -3 1458 246 46 54 chr2 127423746 127423920 -125832663 + MLT1D LTR MaLR 331 505 0 244 254 180 8 chr2 127424287 127424409 -125832174 + MIR SINE MIR 118 260 -2 225 247 19 19 chr2 127425022 127425231 -125831352 + (TA)n Simple_repeat Simple_repeat 1 209 0 1885 239 23 45 chr2 127425338 127425869 -125830714 + LTR40a LTR ERVL 1 519 0 2277 108 0 3 chr2 127426173 127426479 -125830104 - AluSg SINE Alu -5 305 1 23 0 0 0 chr2 127426835 127426858 -125829725 + AT_rich Low_complexity Low_complexity 1 23 0 457 223 18 0 chr2 127426904 127427016 -125829567 + L1ME2 LINE L1 6040 6153 -11 1982 111 21 0 chr2 127427178 127427458 -125829125 + AluSq SINE Alu 1 286 -27 257 349 48 20 chr2 127428674 127428820 -125827763 - MER5A DNA MER1_type 0 189 40 329 284 26 17 chr2 127429017 127429133 -125827450 + MIR SINE MIR 109 225 -37 465 307 46 7 chr2 127429925 127430078 -125826505 + MIR SINE MIR 73 231 -31 355 221 0 0 chr2 127430747 127430824 -125825759 + L1ME2 LINE L1 6076 6152 -12 273 270 35 0 chr2 127430885 127431000 -125825583 + (TA)n Simple_repeat Simple_repeat 1 119 0 412 255 19 0 chr2 127431092 127431198 -125825385 + L1M4 LINE L1 3744 3851 -2295 3309 230 50 13 chr2 127431319 127432111 -125824472 - L1MB5 LINE L1 -10 6662 5841 1423 233 42 52 chr2 127432791 127433311 -125823272 - L1MB5 LINE L1 -2499 4145 3631 876 187 6 0 chr2 127433371 127433542 -125823041 - L1MB5 LINE L1 -5029 1617 1446 533 167 9 37 chr2 127433546 127433654 -125822929 - MER31A LTR ERV1 -28 457 353 1075 259 29 41 chr2 127433654 127434140 -125822443 - L1MB5 LINE L1 -5078 1464 985 5531 221 58 21 chr2 127434148 127435454 -125821129 + L1MDa LINE L1 987 2407 -4133 263 71 24 0 chr2 127435454 127435496 -125821087 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 5531 221 58 21 chr2 127435496 127436539 -125820044 + L1MDa LINE L1 2407 3411 -3129 4467 183 56 2 chr2 127436682 127437591 -125818992 + L1MA8 LINE L1 5316 6273 -18 11188 142 23 4 chr2 127437594 127439444 -125817139 - Tigger1 DNA MER2_type -533 1885 1 751 290 11 0 chr2 127440295 127440471 -125816112 - MER45A DNA AcHobo 0 178 1 369 0 0 0 chr2 127440692 127440733 -125815850 + (A)n Simple_repeat Simple_repeat 1 41 0 11183 184 16 24 chr2 127441643 127444649 -125811934 - L1PA13 LINE L1 -2 6161 3159 447 35 0 0 chr2 127444649 127444706 -125811877 + (TG)n Simple_repeat Simple_repeat 2 58 0 11183 184 16 24 chr2 127444706 127444927 -125811656 - L1PA13 LINE L1 -3004 3159 2938 761 199 28 3 chr2 127444938 127445201 -125811382 + L1MB7 LINE L1 5800 6115 -69 309 337 67 56 chr2 127445250 127445520 -125811063 - HAL1 LINE L1 -1409 1098 826 615 325 71 5 chr2 127446588 127446800 -125809783 - MIR SINE MIR -36 226 1 1869 109 53 0 chr2 127448518 127448783 -125807800 + AluSx SINE Alu 33 311 -1 244 387 9 9 chr2 127449156 127449267 -125807316 + L2 LINE L2 3157 3267 -5 652 321 37 1 chr2 127450987 127451215 -125805368 + MIR SINE MIR 9 248 -14 3230 192 37 16 chr2 127451719 127452428 -125804155 + L1MC1 LINE L1 5610 6333 0 328 264 16 8 chr2 127452617 127452738 -125803845 + (TA)n Simple_repeat Simple_repeat 2 123 0 905 252 109 9 chr2 127454057 127454379 -125802204 - L1ME1 LINE L1 -5 6161 5808 1757 135 20 30 chr2 127454541 127454838 -125801745 - AluSx SINE Alu -18 294 1 249 139 0 0 chr2 127455107 127455150 -125801433 + (TG)n Simple_repeat Simple_repeat 2 44 0 325 294 7 62 chr2 127455400 127455546 -125801037 - LTR67 LTR ERVL -18 539 402 6387 25 5 1 chr2 127456120 127456914 -125799669 - L1PA3 LINE L1 0 6155 5380 293 172 16 0 chr2 127457133 127457197 -125799386 + (TA)n Simple_repeat Simple_repeat 2 66 0 24 32 0 0 chr2 127457279 127457310 -125799273 + AT_rich Low_complexity Low_complexity 1 31 0 22 56 0 0 chr2 127457349 127457385 -125799198 + AT_rich Low_complexity Low_complexity 1 36 0 24 32 0 0 chr2 127457747 127457778 -125798805 + AT_rich Low_complexity Low_complexity 1 31 0 241 189 75 0 chr2 127458639 127458692 -125797891 - MER94 DNA DNA -72 62 6 495 339 23 18 chr2 127458729 127458947 -125797636 + L2 LINE L2 1869 2087 -1227 438 138 12 0 chr2 127458966 127459046 -125797537 - L1MB2 LINE L1 0 6171 6091 2180 254 38 29 chr2 127459055 127460060 -125796523 - L1 LINE L1 -3312 3070 2052 269 186 0 17 chr2 127460086 127460145 -125796438 - MER50 LTR ERV1 -178 556 499 1057 262 54 34 chr2 127460237 127460702 -125795881 - L1 LINE L1 -4762 1551 1078 1617 229 26 3 chr2 127461279 127461624 -125794959 - MLT1A1 LTR MaLR 0 365 13 265 384 35 12 chr2 127461681 127461853 -125794730 - MIR SINE MIR -30 232 57 198 191 0 0 chr2 127462003 127462045 -125794538 + (CA)n Simple_repeat Simple_repeat 2 43 0 325 395 31 5 chr2 127463453 127463648 -125792935 + L2 LINE L2 835 1034 -2280 191 146 65 16 chr2 127463788 127463911 -125792672 + (TA)n Simple_repeat Simple_repeat 2 130 0 542 335 118 21 chr2 127463923 127464171 -125792412 + L2 LINE L2 1205 1428 -1886 210 91 0 0 chr2 127464171 127464204 -125792379 + (CA)n Simple_repeat Simple_repeat 1 33 0 542 335 118 21 chr2 127464204 127464388 -125792195 + L2 LINE L2 1428 1679 -1635 25 31 0 0 chr2 127464731 127464763 -125791820 + AT_rich Low_complexity Low_complexity 1 32 0 417 277 106 32 chr2 127464942 127465130 -125791453 + L1MC1 LINE L1 636 837 -5368 613 318 47 52 chr2 127465250 127465844 -125790739 + L1MC1 LINE L1 1049 1639 -4757 194 81 27 0 chr2 127465856 127465893 -125790690 + (CA)n Simple_repeat Simple_repeat 2 39 0 1424 6 0 6 chr2 127466007 127466176 -125790407 + L1P LINE L1 4277 4444 -1702 209 56 0 28 chr2 127466198 127466234 -125790349 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 1501 37 11 0 chr2 127466237 127466424 -125790159 - L1PA4 LINE L1 -3 6152 5964 362 175 29 22 chr2 127467080 127467217 -125789366 + (TA)n Simple_repeat Simple_repeat 1 138 0 306 280 147 19 chr2 127467989 127468146 -125788437 - MIR SINE MIR -23 239 63 6758 218 37 37 chr2 127468379 127468979 -125787604 + L1MC1 LINE L1 2763 3361 -3041 252 59 0 0 chr2 127468979 127469013 -125787570 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2302 97 3 0 chr2 127469016 127469325 -125787258 + AluSq SINE Alu 1 310 -3 6758 218 37 37 chr2 127469325 127472330 -125784253 + L1MC1 LINE L1 3362 6394 -8 189 0 0 0 chr2 127472574 127472595 -125783988 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 243 0 0 0 chr2 127472674 127472701 -125783882 + (T)n Simple_repeat Simple_repeat 1 27 0 2083 217 102 48 chr2 127473408 127473458 -125783125 + L1MC3 LINE L1 7083 7129 -656 2406 85 0 0 chr2 127473458 127473763 -125782820 - AluSc SINE Alu -4 305 1 2083 217 102 48 chr2 127473763 127474162 -125782421 + L1MC3 LINE L1 7129 7582 -203 2242 46 0 11 chr2 127474162 127474442 -125782141 + AluY SINE Alu 35 311 0 2083 217 102 48 chr2 127474442 127474658 -125781925 + L1MC3 LINE L1 7582 7785 0 21 71 0 0 chr2 127474833 127474875 -125781708 + AT_rich Low_complexity Low_complexity 1 42 0 44 70 0 0 chr2 127476335 127476421 -125780162 + AT_rich Low_complexity Low_complexity 1 86 0 431 277 108 30 chr2 127476634 127476800 -125779783 + MIR SINE MIR 63 241 -21 204 321 37 0 chr2 127477011 127477092 -125779491 - L2 LINE L2 0 3313 3230 1679 130 80 42 chr2 127478328 127478689 -125777894 + THE1C LTR MaLR 1 375 0 22 0 0 0 chr2 127479965 127479987 -125776596 + AT_rich Low_complexity Low_complexity 1 22 0 371 141 16 0 chr2 127480586 127480650 -125775933 - MER58 DNA MER1_type -14 2406 2342 7361 215 72 16 chr2 127481040 127482660 -125773923 + MER52A LTR ERV1 46 1755 0 2339 113 0 0 chr2 127482683 127482992 -125773591 + AluSc SINE Alu 1 309 0 26 30 0 0 chr2 127483499 127483532 -125773051 + AT_rich Low_complexity Low_complexity 1 33 0 2157 124 0 10 chr2 127483866 127484180 -125772403 + AluSx SINE Alu 1 311 -1 21 0 0 0 chr2 127484934 127484955 -125771628 + AT_rich Low_complexity Low_complexity 1 21 0 248 322 47 9 chr2 127485044 127485338 -125771245 + L1ME LINE L1 5184 5491 -673 254 215 215 0 chr2 127485394 127485473 -125771110 + MER110A LTR ERV1 70 165 -303 429 261 163 23 chr2 127485540 127485797 -125770786 + MER110A LTR ERV1 176 468 0 686 289 76 16 chr2 127485890 127486205 -125770378 + L1ME2 LINE L1 1499 1832 -4564 3110 258 52 45 chr2 127486316 127487871 -125768712 + L1ME2 LINE L1 1733 3253 -2962 2058 143 3 0 chr2 127487871 127488179 -125768404 + AluSc SINE Alu 1 309 0 3110 258 52 45 chr2 127488179 127488357 -125768226 + L1ME2 LINE L1 3253 3428 -2787 954 301 65 33 chr2 127488353 127488895 -125767688 + L1ME2 LINE L1 5423 5981 -252 * 2617 69 0 11 chr2 127488897 127489263 -125767320 - L1PA5 LINE L1 0 6154 5812 2134 145 23 10 chr2 127489625 127490018 -125766565 + L1MA5A LINE L1 5897 6294 -3 27 49 0 0 chr2 127490163 127490204 -125766379 + AT_rich Low_complexity Low_complexity 1 41 0 393 287 75 36 chr2 127490432 127490758 -125765825 - L1P4 LINE L1 -557 5609 5267 775 308 107 26 chr2 127491178 127491607 -125764976 - L2 LINE L2 0 3313 2850 4025 137 34 18 chr2 127491617 127492297 -125764286 + LTR8 LTR ERV1 1 691 0 231 36 0 0 chr2 127492564 127492592 -125763991 + (CA)n Simple_repeat Simple_repeat 1 28 0 311 256 152 0 chr2 127493067 127493192 -125763391 - MIR SINE MIR -28 234 91 241 318 84 9 chr2 127493443 127493550 -125763033 - L2 LINE L2 -32 3281 3167 190 333 46 19 chr2 127493876 127493984 -125762599 - MIR SINE MIR -44 218 108 278 225 23 124 chr2 127494182 127494311 -125762272 - L1ME3A LINE L1 -51 6119 6004 209 184 0 0 chr2 127495192 127495230 -125761353 + GA-rich Low_complexity Low_complexity 1 38 0 2782 178 38 21 chr2 127496107 127496641 -125759942 + L1M4c LINE L1 22 564 -5820 12264 234 34 19 chr2 127496652 127502999 -125753584 + L1M1 LINE L1 2 6446 -559 7533 220 40 25 chr2 127503014 127503556 -125753027 + L1M4c LINE L1 554 1086 -5296 2236 85 3 28 chr2 127503556 127503874 -125752709 + AluY SINE Alu 2 311 0 7533 220 40 25 chr2 127503874 127506544 -125750039 + L1M4c LINE L1 1086 3818 -2564 2046 167 66 5 chr2 127506545 127506970 -125749613 + L1MB3 LINE L1 5731 6181 -2 455 296 48 32 chr2 127506996 127507218 -125749365 + MIR SINE MIR 20 243 -19 207 333 0 0 chr2 127507674 127507731 -125748852 - MIR SINE MIR -148 114 58 232 395 0 0 chr2 127507819 127507895 -125748688 - MER5A DNA MER1_type -49 140 65 229 156 16 16 chr2 127508294 127508358 -125748225 + (TA)n Simple_repeat Simple_repeat 2 65 0 30 0 0 0 chr2 127508631 127508661 -125747922 + AT_rich Low_complexity Low_complexity 1 30 0 1998 169 83 0 chr2 127508661 127509068 -125747515 + L1M2 LINE L1 5297 5737 -563 21 57 0 0 chr2 127509598 127509633 -125746950 + AT_rich Low_complexity Low_complexity 1 35 0 368 297 115 36 chr2 127510129 127510321 -125746262 - MIR SINE MIR -6 256 50 23 0 0 0 chr2 127512222 127512245 -125744338 + AT_rich Low_complexity Low_complexity 1 23 0 580 297 57 14 chr2 127512621 127512836 -125743747 + MIR SINE MIR 6 228 -34 1330 206 39 21 chr2 127513245 127513527 -125743056 + AluJo SINE Alu 1 287 -25 191 61 30 0 chr2 127513531 127513564 -125743019 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 186 268 18 18 chr2 127513749 127513805 -125742778 + L2 LINE L2 2640 2695 -619 1737 131 10 3 chr2 127514046 127514336 -125742247 + L1PB1 LINE L1 5857 6148 -3 225 0 0 0 chr2 127515022 127515047 -125741536 + (CA)n Simple_repeat Simple_repeat 1 25 0 275 217 157 17 chr2 127517173 127517311 -125739272 - MIR SINE MIR -54 154 2 190 276 55 77 chr2 127517841 127518022 -125738561 + MIR SINE MIR 20 187 -64 1763 157 46 3 chr2 127518156 127518461 -125738122 - MER46B DNA MER2_type 0 236 44 532 288 86 77 chr2 127519247 127519420 -125737163 + L1ME LINE L1 923 1093 -5854 2466 47 0 31 chr2 127519420 127519738 -125736845 + AluY SINE Alu 1 308 -3 532 288 86 77 chr2 127519738 127520112 -125736471 + L1ME LINE L1 1093 1475 -5472 306 295 60 48 chr2 127520130 127520296 -125736287 + L1ME LINE L1 1378 1545 -5314 1322 220 0 54 chr2 127520305 127520582 -125736001 + AluJo SINE Alu 7 268 -44 276 302 67 15 chr2 127520594 127520987 -125735596 + L1ME LINE L1 1541 2099 -4905 238 167 0 0 chr2 127521130 127521166 -125735417 + (CA)n Simple_repeat Simple_repeat 2 37 0 1581 170 145 27 chr2 127521168 127521533 -125735050 + Tigger2a DNA MER2_type 2 409 -25 265 294 0 12 chr2 127521533 127521618 -125734965 + L1MB3 LINE L1 3753 3836 -2310 * 1469 247 55 13 chr2 127521616 127522147 -125734436 + L1MB3 LINE L1 4781 5333 -813 390 284 49 96 chr2 127522260 127522791 -125733792 + L1ME LINE L1 2150 2655 -4483 532 206 0 37 chr2 127522817 127522953 -125733630 - L1 LINE L1 -2083 4063 3933 816 144 0 0 chr2 127522953 127523071 -125733512 + AluSq/x SINE Alu 1 118 -195 3350 43 0 5 chr2 127523072 127523489 -125733094 + L1PA4 LINE L1 5738 6152 -3 1292 73 0 58 chr2 127523604 127523795 -125732788 + AluY SINE Alu 119 298 -13 2608 211 21 49 chr2 127523797 127524512 -125732071 + L1MB3 LINE L1 5318 6012 -171 4232 237 56 3 chr2 127524515 127525607 -125730976 + L1PA13 LINE L1 5005 6160 -3 2702 258 97 17 chr2 127525626 127527012 -125729571 + L1ME LINE L1 2945 4441 -2516 1851 148 59 9 chr2 127527012 127527350 -125729233 - THE1A LTR MaLR 0 355 1 9920 125 45 3 chr2 127527351 127528866 -125727717 - THE1A-int LTR MaLR -1 1579 1 1165 179 32 0 chr2 127528866 127529084 -125727499 - THE1A LTR MaLR 0 355 131 25 75 0 0 chr2 127529305 127529358 -125727225 + AT_rich Low_complexity Low_complexity 1 53 0 215 307 163 20 chr2 127529627 127529780 -125726803 - MIR SINE MIR 0 262 88 1065 214 105 47 chr2 127532814 127533156 -125723427 + MLT1A1 LTR MaLR 3 364 -1 1886 199 41 11 chr2 127533653 127534105 -125722478 + L1M3 LINE L1 5217 5680 -503 375 335 139 0 chr2 127534211 127534498 -125722085 - L1MDa LINE L1 -4517 2023 1697 250 276 77 77 chr2 127534960 127535130 -125721453 - L1MDa LINE L1 -5645 885 716 186 43 0 0 chr2 127535276 127535299 -125721284 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 944 176 56 9 chr2 127535390 127535692 -125720891 - MLT1B LTR MaLR 0 390 11 209 274 20 0 chr2 127536770 127536821 -125719762 + MIR SINE MIR 65 116 -146 373 253 23 0 chr2 127537015 127537102 -125719481 + L2 LINE L2 3225 3313 0 2696 236 24 5 chr2 127538016 127538635 -125717948 - MER82 DNA MER2_type 0 653 23 204 40 0 0 chr2 127539639 127539664 -125716919 + (A)n Simple_repeat Simple_repeat 1 25 0 1247 247 117 13 chr2 127539689 127540066 -125716517 - MLT1F LTR MaLR -1 541 126 210 254 195 42 chr2 127540755 127540873 -125715710 - MIR SINE MIR -93 169 34 30 0 0 0 chr2 127542913 127542943 -125713640 + AT_rich Low_complexity Low_complexity 1 30 0 2022 114 3 14 chr2 127544101 127544398 -125712185 - AluSc SINE Alu -14 295 2 540 253 134 10 chr2 127544430 127544632 -125711951 + L2 LINE L2 1284 1510 -1804 183 42 0 0 chr2 127544745 127544769 -125711814 + (CA)n Simple_repeat Simple_repeat 2 25 0 4313 254 94 24 chr2 127544900 127545061 -125711522 - L1 LINE L1 -2266 4116 3968 1872 144 31 47 chr2 127545061 127545442 -125711141 + THE1C LTR MaLR 1 375 0 4313 254 94 24 chr2 127545442 127548461 -125708122 - L1 LINE L1 -2414 3968 781 204 67 0 0 chr2 127548555 127548585 -125707998 + (TC)n Simple_repeat Simple_repeat 1 30 0 2336 86 16 0 chr2 127549148 127549451 -125707132 - AluSq SINE Alu -5 308 1 470 319 82 85 chr2 127549517 127550091 -125706492 - HAL1 LINE L1 -988 1519 948 379 326 58 44 chr2 127550393 127550758 -125705825 - HAL1 LINE L1 -2130 377 8 274 368 0 0 chr2 127550767 127550884 -125705699 + L2 LINE L2 1818 1934 -1380 213 333 58 0 chr2 127551266 127551353 -125705230 - L2 LINE L2 -215 3057 2966 3538 203 38 34 chr2 127551402 127551614 -125704969 - Tigger6a DNA MER2_type -697 900 690 2071 116 3 22 chr2 127551614 127551932 -125704651 - AluSq SINE Alu -1 312 1 3538 203 38 34 chr2 127551932 127552585 -125703998 - Tigger6a DNA MER2_type -907 690 31 23 33 0 0 chr2 127554429 127554459 -125702124 + AT_rich Low_complexity Low_complexity 1 30 0 304 266 0 21 chr2 127554976 127555070 -125701513 - L1ME2 LINE L1 -171 5993 5902 10875 154 34 16 chr2 127555074 127556979 -125699604 - Tigger2 DNA MER2_type -3 2715 776 924 210 137 4 chr2 127557006 127557239 -125699344 + MLT1C LTR MaLR 204 467 0 279 203 149 14 chr2 127557324 127557398 -125699185 + MIR3 SINE MIR 107 190 -18 214 192 19 0 chr2 127557965 127557999 -125698584 + T-rich Low_complexity Low_complexity 3 40 -15 4324 14 0 0 chr2 127557999 127558493 -125698090 - L1PA2 LINE L1 -2 6153 5660 214 192 19 0 chr2 127558493 127558510 -125698073 + T-rich Low_complexity Low_complexity 40 55 0 757 235 71 0 chr2 127558832 127559002 -125697581 - MER5A DNA MER1_type -7 182 1 220 253 32 74 chr2 127561383 127561478 -125695105 - L2 LINE L2 0 3313 3223 398 235 196 22 chr2 127561545 127561775 -125694808 - MER5C DNA MER1_type -54 270 1 27 0 0 0 chr2 127562475 127562502 -125694081 + AT_rich Low_complexity Low_complexity 1 27 0 1999 179 60 21 chr2 127562681 127563099 -125693484 - Tigger2a DNA MER2_type 0 434 1 280 222 12 25 chr2 127563495 127563576 -125693007 - L1M4 LINE L1 -5627 915 836 * 468 252 0 22 chr2 127563566 127563701 -125692882 - L1MC2 LINE L1 -212 6132 6001 2780 29 0 0 chr2 127564376 127564692 -125691891 + AluYb8 SINE Alu 1 316 -2 25 0 0 0 chr2 127564779 127564804 -125691779 + AT_rich Low_complexity Low_complexity 1 25 0 4888 259 56 32 chr2 127564944 127565937 -125690646 - L1M4 LINE L1 -4831 2024 1056 258 105 0 0 chr2 127565937 127565975 -125690608 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 4888 259 56 32 chr2 127565975 127566959 -125689624 - L1M4 LINE L1 -5799 1056 11 21 57 0 0 chr2 127568826 127568861 -125687722 + AT_rich Low_complexity Low_complexity 1 35 0 1383 192 40 14 chr2 127569000 127569276 -125687307 - AluJb SINE Alu -19 283 1 31 0 0 0 chr2 127570513 127570544 -125686039 + AT_rich Low_complexity Low_complexity 1 31 0 40 67 0 0 chr2 127570765 127570840 -125685743 + AT_rich Low_complexity Low_complexity 1 75 0 4882 189 34 14 chr2 127570955 127572548 -125684035 - L1PA16 LINE L1 -9 6808 5185 2035 255 187 20 chr2 127572543 127573443 -125683140 - L1PA16 LINE L1 -4446 2351 1280 * 422 196 0 0 chr2 127573459 127573551 -125683032 - L1 LINE L1 -3100 3046 2955 28 29 0 0 chr2 127573681 127573716 -125682867 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr2 127574142 127574171 -125682412 + AT_rich Low_complexity Low_complexity 1 29 0 201 39 0 0 chr2 127574327 127574353 -125682230 + (CA)n Simple_repeat Simple_repeat 2 27 0 322 283 25 42 chr2 127576016 127576136 -125680447 + MIR SINE MIR 16 133 -129 190 303 40 26 chr2 127576606 127576682 -125679901 - MER5A DNA MER1_type -112 77 1 1525 99 81 0 chr2 127576744 127576911 -125679672 - AluY SINE Alu -5 306 115 492 18 0 0 chr2 127576911 127576968 -125679615 + (TG)n Simple_repeat Simple_repeat 2 58 0 1525 99 81 0 chr2 127576968 127577023 -125679560 - AluY SINE Alu -196 115 66 216 0 0 0 chr2 127577023 127577047 -125679536 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 270 368 83 0 chr2 127577547 127577691 -125678892 - MIR SINE MIR -22 240 85 2036 176 62 2 chr2 127578231 127578635 -125677948 + MSTA LTR MaLR 1 428 0 1329 210 26 7 chr2 127578710 127579015 -125677568 + L1MB1 LINE L1 5858 6168 0 248 261 162 0 chr2 127579257 127579368 -125677215 + L1MCc LINE L1 1337 1465 -4958 369 220 10 30 chr2 127579383 127579483 -125677100 + L1ME1 LINE L1 6063 6160 -6 24 0 0 0 chr2 127580005 127580029 -125676554 + AT_rich Low_complexity Low_complexity 1 24 0 31 0 0 0 chr2 127581280 127581311 -125675272 + AT_rich Low_complexity Low_complexity 1 31 0 258 225 0 0 chr2 127581661 127581741 -125674842 + (TA)n Simple_repeat Simple_repeat 1 80 0 389 209 164 45 chr2 127582353 127582554 -125674029 - L1M4 LINE L1 -1174 4972 4748 387 330 115 4 chr2 127582732 127583002 -125673581 - L1M4 LINE L1 -1544 4602 4303 1555 188 43 46 chr2 127583030 127583445 -125673138 - L1MC3 LINE L1 -21 7764 7351 334 342 68 5 chr2 127583691 127583881 -125672702 - L1M4 LINE L1 -3824 2322 2121 290 258 80 68 chr2 127584203 127584366 -125672217 + LTR67 LTR ERVL 386 550 -7 503 305 57 64 chr2 127584375 127584770 -125671813 - L1MEc LINE L1 -3684 2531 2182 243 0 0 0 chr2 127585545 127585572 -125671011 + (CA)n Simple_repeat Simple_repeat 2 28 0 4735 130 30 26 chr2 127585766 127586537 -125670046 - MER4E LTR ERV1 -5 774 1 24 32 0 0 chr2 127586602 127586633 -125669950 + AT_rich Low_complexity Low_complexity 1 31 0 946 219 56 4 chr2 127586661 127586894 -125669689 - MLT1D LTR MaLR 0 505 261 1137 132 5 52 chr2 127587361 127587573 -125669010 + MER1B DNA MER1_type 138 339 0 1252 220 57 48 chr2 127587582 127587936 -125668647 + MLT1A2 LTR MaLR 5 361 -13 560 328 65 4 chr2 127589305 127589552 -125667031 + ERVL LTR ERVL 2072 2333 -3431 216 279 15 44 chr2 127589651 127589719 -125666864 - MIR3 SINE MIR -22 186 121 37 23 0 0 chr2 127590996 127591040 -125665543 + AT_rich Low_complexity Low_complexity 1 44 0 1698 236 19 57 chr2 127591498 127591976 -125664607 + MLT2B1 LTR ERVL 1 460 -60 270 160 0 0 chr2 127592004 127592054 -125664529 + (CA)n Simple_repeat Simple_repeat 1 50 0 221 0 35 0 chr2 127592877 127592906 -125663677 + (CA)n Simple_repeat Simple_repeat 2 31 0 531 301 98 0 chr2 127592983 127593136 -125663447 - MER5A DNA MER1_type -21 168 1 22 0 0 0 chr2 127593598 127593620 -125662963 + AT_rich Low_complexity Low_complexity 1 22 0 825 306 83 49 chr2 127594149 127594965 -125661618 - L1MC4 LINE L1 -65 7977 7134 642 306 91 46 chr2 127594959 127595498 -125661085 - L1MC4a LINE L1 -953 6855 6293 * 221 0 0 33 chr2 127595504 127595534 -125661049 + (TTA)n Simple_repeat Simple_repeat 2 30 0 412 276 41 63 chr2 127595544 127595812 -125660771 + L1ME1 LINE L1 2 263 -5782 1037 131 0 0 chr2 127595864 127596009 -125660574 - AluSc SINE Alu -88 221 77 1189 298 16 6 chr2 127596050 127596537 -125660046 + L1ME1 LINE L1 2930 3421 -3143 2851 163 11 0 chr2 127596563 127597199 -125659384 + L1P5 LINE L1 5100 5742 -412 18481 171 25 25 chr2 127597199 127600614 -125655969 - L1M1 LINE L1 -4140 3425 10 337 269 82 18 chr2 127600618 127600789 -125655794 + L1ME1 LINE L1 3851 4032 -2532 * 1750 273 33 66 chr2 127600758 127601965 -125654618 + L1ME1 LINE L1 4880 6017 -567 200 59 29 0 chr2 127601965 127601999 -125654584 + (CA)n Simple_repeat Simple_repeat 2 36 0 1750 273 33 66 chr2 127601999 127602352 -125654231 + L1ME1 LINE L1 6017 6380 -204 535 259 83 10 chr2 127602354 127602547 -125654036 + L1MC4a LINE L1 6277 6483 -1325 584 226 0 0 chr2 127602569 127602693 -125653890 + MLT1F1 LTR MaLR 1 124 -443 649 268 82 0 chr2 127602693 127602935 -125653648 + L1MD3 LINE L1 7228 7665 -326 2029 162 36 8 chr2 127602938 127603296 -125653287 + L1MC/D LINE L1 5446 5813 -520 694 245 31 13 chr2 127603348 127603507 -125653076 - MLT2B2 LTR ERVL -157 358 197 290 208 0 0 chr2 127603915 127603963 -125652620 - MLT2B2 LTR ERVL -318 197 150 1461 251 9 3 chr2 127603963 127604278 -125652305 + L1P4 LINE L1 1020 1336 -5513 2541 92 3 47 chr2 127604278 127604403 -125652180 - THE1B LTR MaLR 0 364 235 6554 62 49 5 chr2 127604403 127605260 -125651323 - MER11D LTR ERVK -2 895 1 2541 92 3 47 chr2 127605260 127605515 -125651068 - THE1B LTR MaLR -129 235 1 8473 183 55 16 chr2 127605515 127607550 -125649033 + L1P4 LINE L1 1332 3430 -3419 226 240 0 0 chr2 127607608 127607658 -125648925 + L1P4 LINE L1 3540 3589 -3260 1511 122 12 12 chr2 127607658 127607905 -125648678 - L1PA15 LINE L1 -3 6162 5916 8183 202 34 9 chr2 127608000 127610200 -125646383 - L1PA15 LINE L1 -236 5929 3656 183 100 0 0 chr2 127610200 127610230 -125646353 + (TTG)n Simple_repeat Simple_repeat 2 31 0 8183 202 34 9 chr2 127610230 127610493 -125646090 - L1PA15 LINE L1 -2509 3656 3401 * 8209 225 20 35 chr2 127610491 127612294 -125644289 + L1P4 LINE L1 3581 5327 -1542 2517 67 0 3 chr2 127612294 127612606 -125643977 + AluY SINE Alu 1 311 0 8209 225 20 35 chr2 127612606 127613544 -125643039 + L1P4 LINE L1 5327 6278 -591 243 211 0 0 chr2 127613545 127613602 -125642981 - L1 LINE L1 -916 5230 5174 * 1454 119 23 0 chr2 127613598 127613816 -125642767 + L1P4 LINE L1 6282 6504 -365 230 161 74 0 chr2 127613816 127613897 -125642686 + (TA)n Simple_repeat Simple_repeat 2 88 0 376 326 84 31 chr2 127613897 127613952 -125642631 - L1MC4 LINE L1 -1339 6703 6652 1943 168 29 8 chr2 127613952 127614328 -125642255 + L1PA16 LINE L1 5783 6166 0 376 326 84 31 chr2 127614328 127614594 -125641989 - L1MC4 LINE L1 -1390 6652 6365 21 0 0 0 chr2 127614704 127614725 -125641858 + AT_rich Low_complexity Low_complexity 1 21 0 584 265 129 31 chr2 127614743 127615515 -125641068 - L1MC4a LINE L1 -1623 6185 5296 514 305 139 60 chr2 127615547 127615789 -125640794 - L1MC4a LINE L1 -885 5261 5040 1924 149 0 0 chr2 127615789 127616092 -125640491 - AluSx SINE Alu 0 303 1 514 305 139 60 chr2 127616092 127616739 -125639844 - L1MC4a LINE L1 -1106 5040 4295 275 299 26 8 chr2 127616762 127616879 -125639704 - L1MC4a LINE L1 -1926 4220 4102 257 303 113 5 chr2 127616942 127617163 -125639420 - L1ME LINE L1 -303 5818 5574 23 68 0 0 chr2 127617390 127617434 -125639149 + AT_rich Low_complexity Low_complexity 1 44 0 604 266 101 24 chr2 127617855 127618062 -125638521 - MIR SINE MIR -25 237 15 647 262 12 23 chr2 127618261 127618433 -125638150 + MER45A DNA AcHobo 8 177 -1 2573 42 0 0 chr2 127618567 127618875 -125637708 - AluY SINE Alu 0 311 4 21 0 0 0 chr2 127619137 127619158 -125637425 + AT_rich Low_complexity Low_complexity 1 21 0 459 378 46 61 chr2 127619323 127619911 -125636672 + L1MEd LINE L1 304 882 -5237 289 303 158 20 chr2 127619985 127620239 -125636344 + L1MEd LINE L1 969 1257 -4862 2328 271 63 36 chr2 127620335 127621249 -125635334 + L1MCb LINE L1 5 943 -5102 23 0 0 0 chr2 127621821 127621844 -125634739 + AT_rich Low_complexity Low_complexity 1 23 0 200 366 29 52 chr2 127621943 127622115 -125634468 + MIR SINE MIR 55 222 -40 1565 262 93 14 chr2 127622326 127622757 -125633826 + MLT2B1 LTR ERVL 21 485 -35 2570 111 0 11 chr2 127622834 127623202 -125633381 + THE1B LTR MaLR 1 364 0 8760 132 61 36 chr2 127623202 127624720 -125631863 + THE1B-int LTR MaLR 1 1556 -24 2411 123 6 8 chr2 127624726 127625091 -125631492 + THE1B LTR MaLR 1 364 0 289 114 0 0 chr2 127625091 127625135 -125631448 + MLT2D LTR ERVL 371 414 0 2224 114 3 0 chr2 127625230 127625528 -125631055 + AluSp SINE Alu 1 299 -14 1648 219 5 32 chr2 127625651 127626026 -125630557 - MLT1A1 LTR MaLR 0 365 1 445 281 15 0 chr2 127626051 127626186 -125630397 + LTR16A1 LTR ERVL 303 439 -18 23 0 0 0 chr2 127626473 127626496 -125630087 + AT_rich Low_complexity Low_complexity 1 23 0 2087 166 83 10 chr2 127626931 127627329 -125629254 - L1PA15 LINE L1 -3 6162 5736 22 35 0 0 chr2 127627344 127627373 -125629210 + AT_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr2 127629054 127629096 -125627487 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr2 127629226 127629247 -125627336 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 127629356 127629377 -125627206 + AT_rich Low_complexity Low_complexity 1 21 0 2094 137 0 0 chr2 127629557 127629847 -125626736 + AluSx SINE Alu 3 295 -17 531 0 0 0 chr2 127629847 127629906 -125626677 + (CATA)n Simple_repeat Simple_repeat 2 60 0 264 236 14 14 chr2 127630930 127631002 -125625581 + (TATATG)n Simple_repeat Simple_repeat 6 77 0 245 328 35 26 chr2 127631293 127631409 -125625174 + MER20 DNA MER1_type 3 119 -100 183 42 0 0 chr2 127631436 127631460 -125625123 + (CAA)n Simple_repeat Simple_repeat 2 25 0 242 305 0 24 chr2 127631897 127631979 -125624604 - L2 LINE L2 -7 3306 3227 7365 42 0 0 chr2 127632560 127633497 -125623086 - L1PA4 LINE L1 -2 6153 5218 222 337 69 10 chr2 127633508 127633609 -125622974 + MIR SINE MIR 34 140 -122 2122 135 48 22 chr2 127633627 127633982 -125622601 + THE1B LTR MaLR 1 364 0 554 316 116 0 chr2 127634433 127634623 -125621960 + MIR SINE MIR 32 243 -19 2680 101 0 0 chr2 127634636 127634991 -125621592 + THE1A LTR MaLR 1 355 0 222 155 35 35 chr2 127635232 127635290 -125621293 + GA-rich Low_complexity Low_complexity 3 60 0 591 294 201 16 chr2 127636306 127636744 -125619839 + LTR33 LTR ERVL 1 519 -2 30 0 0 0 chr2 127637502 127637532 -125619051 + AT_rich Low_complexity Low_complexity 1 30 0 281 333 36 0 chr2 127638304 127638415 -125618168 - MIR SINE MIR -72 190 76 810 219 5 36 chr2 127639053 127639272 -125617311 + L1M4 LINE L1 3731 3942 -2204 1558 223 41 22 chr2 127639287 127639700 -125616883 + MLT1C LTR MaLR 42 462 -5 1540 204 38 3 chr2 127639700 127640068 -125616515 + L1MB5 LINE L1 5785 6165 -9 292 301 11 0 chr2 127641540 127641633 -125614950 + MIR SINE MIR 169 262 0 1076 204 5 0 chr2 127642208 127642399 -125614184 - AluJo SINE Alu -120 192 1 708 294 42 19 chr2 127643961 127644271 -125612312 + MLT1L LTR MaLR 6 405 -210 336 102 0 0 chr2 127644447 127644496 -125612087 + (TTCC)n Simple_repeat Simple_repeat 2 50 0 1145 267 66 34 chr2 127646028 127646559 -125610024 + L1ME3 LINE L1 5612 6159 -3 184 343 69 0 chr2 127647770 127647872 -125608711 - L2 LINE L2 -23 3290 3182 983 168 46 0 chr2 127648124 127648297 -125608286 + MLT2B2 LTR ERVL 4 184 -331 643 171 0 0 chr2 127648294 127648405 -125608178 + MLT2B2 LTR ERVL 404 514 -1 * 223 167 106 15 chr2 127648681 127648747 -125607836 + L2 LINE L2 2207 2278 -1036 180 0 0 0 chr2 127648777 127648797 -125607786 + (CA)n Simple_repeat Simple_repeat 1 20 0 247 317 88 66 chr2 127648798 127649025 -125607558 - L2 LINE L2 -230 3042 2811 183 100 0 0 chr2 127649075 127649105 -125607478 + (TTA)n Simple_repeat Simple_repeat 2 31 0 259 246 26 18 chr2 127649635 127649749 -125606834 + (TA)n Simple_repeat Simple_repeat 2 116 0 505 230 15 0 chr2 127649749 127649884 -125606699 - Charlie7 DNA MER1_type -276 2336 2200 1138 269 35 17 chr2 127649904 127650309 -125606274 - Charlie7 DNA MER1_type -1949 663 252 1241 197 32 0 chr2 127650387 127650671 -125605912 - L1 LINE L1 -749 5397 5105 2321 163 5 2 chr2 127650671 127651092 -125605491 + L1MA3 LINE L1 5877 6300 -5 356 284 64 55 chr2 127651095 127651422 -125605161 - LTR37B LTR ERV1 -45 423 94 182 289 26 66 chr2 127652736 127652812 -125603771 + MIR SINE MIR 75 147 -115 461 240 29 23 chr2 127654117 127654288 -125602295 + LTR37B LTR ERV1 106 277 -191 435 78 69 20 chr2 127654288 127654390 -125602193 + CT-rich Low_complexity Low_complexity 4 110 0 250 206 27 14 chr2 127654433 127654506 -125602077 + LTR37B LTR ERV1 330 403 -65 261 196 0 0 chr2 127654559 127654615 -125601968 + (TA)n Simple_repeat Simple_repeat 1 56 0 365 388 33 29 chr2 127654682 127654924 -125601659 + MIR SINE MIR 3 245 -17 361 327 39 7 chr2 127655986 127656139 -125600444 + MIR SINE MIR 35 192 -70 1892 138 4 0 chr2 127657190 127657458 -125599125 - AluSx SINE Alu -37 275 7 575 337 90 25 chr2 127657462 127657949 -125598634 + MERVL LTR ERVL 4033 4551 -934 444 351 5 0 chr2 127658211 127658402 -125598181 + MERVL LTR ERVL 4919 5110 -654 189 0 0 0 chr2 127658696 127658717 -125597866 + (T)n Simple_repeat Simple_repeat 1 21 0 238 234 31 16 chr2 127658914 127658978 -125597605 + LTR33 LTR ERVL 10 74 -447 435 251 18 37 chr2 127659166 127659329 -125597254 + LTR33 LTR ERVL 352 511 -10 3352 201 31 36 chr2 127659893 127660608 -125595975 - MER50 LTR ERV1 -23 711 1 337 333 121 62 chr2 127660826 127661132 -125595451 - L1MEd LINE L1 -5737 382 59 21 0 0 0 chr2 127662983 127663004 -125593579 + AT_rich Low_complexity Low_complexity 1 21 0 963 213 92 80 chr2 127663362 127663700 -125592883 - MER2 DNA MER2_type -1 343 2 1554 177 46 0 chr2 127663737 127663997 -125592586 + AluJb SINE Alu 5 276 -36 1124 271 135 20 chr2 127664310 127664970 -125591613 - L1ME3A LINE L1 -170 5992 5256 627 263 85 39 chr2 127665060 127665470 -125591113 - L1ME3A LINE L1 -929 5217 4789 862 202 88 10 chr2 127665637 127665793 -125590790 - AluJo SINE Alu -21 291 116 189 0 0 0 chr2 127665793 127665814 -125590769 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 862 202 88 10 chr2 127665814 127665850 -125590733 - AluJo SINE Alu -196 116 84 228 284 45 35 chr2 127665874 127666075 -125590508 - L1ME3A LINE L1 -2753 3393 3191 1793 112 0 0 chr2 127666142 127666374 -125590209 - AluSx SINE Alu -27 285 54 1903 122 17 14 chr2 127666375 127666670 -125589913 + AluSx SINE Alu 14 309 -3 434 276 50 123 chr2 127666671 127666881 -125589702 + L1MC4 LINE L1 7525 7690 -352 2019 117 3 23 chr2 127666881 127667180 -125589403 + AluSq SINE Alu 1 293 -20 434 276 50 123 chr2 127667180 127667393 -125589190 + L1MC4 LINE L1 7690 7917 -125 261 180 0 0 chr2 127667403 127667453 -125589130 + (TATATG)n Simple_repeat Simple_repeat 2 51 0 319 329 163 21 chr2 127667865 127668351 -125588232 + L1ME4a LINE L1 5563 6117 -4 182 283 0 22 chr2 127668540 127668586 -125587997 - MIR3 SINE MIR -28 180 136 2332 211 35 4 chr2 127669751 127670295 -125586288 + L1MB4 LINE L1 5602 6162 -18 180 353 0 0 chr2 127670545 127670596 -125585987 + L2 LINE L2 3210 3260 -12 11939 195 27 8 chr2 127671056 127673362 -125583221 + L1MA2 LINE L1 14 2361 -5204 2990 210 11 27 chr2 127673385 127674136 -125582447 + L1MA2 LINE L1 4678 5416 -2149 * 6003 160 9 9 chr2 127674130 127675942 -125580641 + L1MA2 LINE L1 5912 7722 -1 1027 193 47 4 chr2 127676181 127676501 -125580082 + L1M3 LINE L1 5154 5487 -681 2061 114 10 13 chr2 127676505 127676813 -125579770 - AluSq SINE Alu -5 308 2 287 333 42 8 chr2 127676814 127676934 -125579649 - MIR SINE MIR -102 160 37 589 224 8 0 chr2 127677072 127677197 -125579386 + L1MD1 LINE L1 19 144 -6396 467 287 122 6 chr2 127677208 127677372 -125579211 + L1MD1 LINE L1 597 779 -5761 3367 242 80 85 chr2 127677415 127678549 -125578034 + L1MD1 LINE L1 2860 3998 -2638 2715 26 0 0 chr2 127678549 127678858 -125577725 + AluYa5 SINE Alu 1 309 -2 3367 242 80 85 chr2 127678858 127679408 -125577175 + L1MD1 LINE L1 3998 4549 -2087 780 210 6 19 chr2 127679408 127679570 -125577013 + FRAM SINE Alu 1 152 -24 3367 242 80 85 chr2 127679570 127681417 -125575166 + L1MD1 LINE L1 4549 6524 -112 2053 65 38 21 chr2 127681417 127681743 -125574840 + AluY SINE Alu 1 311 0 3367 242 80 85 chr2 127681743 127681837 -125574746 + L1MD1 LINE L1 6524 6617 -19 213 132 0 0 chr2 127681887 127681925 -125574658 + (A)n Simple_repeat Simple_repeat 1 38 0 267 31 0 0 chr2 127682899 127682931 -125573652 + (TG)n Simple_repeat Simple_repeat 1 32 0 500 146 7 50 chr2 127683713 127683996 -125572587 + (TA)n Simple_repeat Simple_repeat 1 270 0 2215 84 0 7 chr2 127684442 127684728 -125571855 - AluY SINE Alu -25 286 3 4716 205 4 23 chr2 127685267 127685490 -125571093 - MER54A LTR ERVL 0 901 675 2226 148 69 10 chr2 127685490 127685896 -125570687 - MSTB1 LTR MaLR 0 432 3 4716 205 4 23 chr2 127685896 127686126 -125570457 - MER54A LTR ERVL -226 675 442 1619 186 128 31 chr2 127686126 127686541 -125570042 + MSTB2 LTR MaLR 1 455 -2 4716 205 4 23 chr2 127686541 127687004 -125569579 - MER54A LTR ERVL -459 442 1 27 108 0 0 chr2 127688361 127688472 -125568111 + AT_rich Low_complexity Low_complexity 1 111 0 28 0 0 0 chr2 127688801 127688829 -125567754 + AT_rich Low_complexity Low_complexity 1 28 0 326 268 92 14 chr2 127688842 127688984 -125567599 + L1ME4a LINE L1 5270 5422 -2386 4871 21 2 0 chr2 127689084 127689653 -125566930 + L1PA3 LINE L1 5586 6155 0 302 291 85 40 chr2 127689748 127689995 -125566588 + L1ME4a LINE L1 5655 5912 -209 1714 202 235 9 chr2 127690100 127690649 -125565934 - L1MC3 LINE L1 -2 7783 7111 2799 220 51 41 chr2 127690693 127691456 -125565127 - L1MC3 LINE L1 -979 6806 6036 625 274 8 48 chr2 127691472 127691740 -125564843 - L1MCa LINE L1 -5809 361 3 293 354 118 25 chr2 127691748 127692104 -125564479 - L2 LINE L2 -991 2323 1935 195 69 0 0 chr2 127692842 127692871 -125563712 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 11973 189 30 10 chr2 127693040 127694814 -125561769 - L1MA2 LINE L1 0 7723 5986 363 60 0 0 chr2 127694814 127694864 -125561719 + (TG)n Simple_repeat Simple_repeat 2 51 0 11973 189 30 10 chr2 127694864 127696791 -125559792 - L1MA2 LINE L1 -1737 5986 3944 6126 191 21 66 chr2 127696802 127698170 -125558413 - L1MA2 LINE L1 -6243 1322 16 198 331 24 65 chr2 127699027 127699151 -125557432 + MIR3 SINE MIR 5 123 -85 180 0 0 0 chr2 127699636 127699656 -125556927 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2030 125 0 10 chr2 127699659 127699956 -125556627 - AluSx SINE Alu -18 294 1 259 267 82 75 chr2 127700441 127700587 -125555996 + MIR SINE MIR 51 197 -65 32 0 0 0 chr2 127700589 127700621 -125555962 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr2 127700997 127701019 -125555564 + AT_rich Low_complexity Low_complexity 1 22 0 209 244 32 41 chr2 127701394 127701439 -125555144 + (TA)n Simple_repeat Simple_repeat 2 46 -77 1364 207 21 21 chr2 127701439 127701729 -125554854 + AluJo SINE Alu 1 290 -22 209 244 32 41 chr2 127701729 127701806 -125554777 + (TA)n Simple_repeat Simple_repeat 46 123 0 211 325 12 25 chr2 127701899 127701979 -125554604 - MIR SINE MIR -157 105 27 184 143 0 41 chr2 127702919 127702968 -125553615 + (ATG)n Simple_repeat Simple_repeat 1 47 0 22 0 0 0 chr2 127703944 127703966 -125552617 + AT_rich Low_complexity Low_complexity 1 22 0 183 346 26 26 chr2 127704797 127704875 -125551708 + MER5A DNA MER1_type 23 100 -89 1663 146 19 0 chr2 127705539 127705799 -125550784 + AluSx SINE Alu 1 265 -47 23 54 0 0 chr2 127706324 127706361 -125550222 + AT_rich Low_complexity Low_complexity 1 37 0 220 346 0 0 chr2 127706408 127706486 -125550097 + (TG)n Simple_repeat Simple_repeat 1 78 0 198 379 11 32 chr2 127707709 127707804 -125548779 + MIR3 SINE MIR 5 97 -111 964 184 61 42 chr2 127707808 127708118 -125548465 - MER33 DNA MER1_type -4 320 5 304 341 100 36 chr2 127708409 127708629 -125547954 + L3 LINE CR1 1113 1346 -231 239 306 24 12 chr2 127708689 127708774 -125547809 - L2 LINE L2 -3 3269 3184 23 0 0 0 chr2 127708778 127708801 -125547782 + AT_rich Low_complexity Low_complexity 1 23 0 517 311 31 11 chr2 127709732 127709992 -125546591 - L1MDa LINE L1 -4380 2160 1896 961 77 0 44 chr2 127710001 127710184 -125546399 + (TA)n Simple_repeat Simple_repeat 2 176 0 630 101 0 85 chr2 127710208 127710587 -125545996 + (TA)n Simple_repeat Simple_repeat 1 346 0 236 92 0 92 chr2 127710634 127710699 -125545884 + L1MCa LINE L1 2006 2064 -4362 485 134 5 119 chr2 127710699 127710901 -125545682 + (TA)n Simple_repeat Simple_repeat 1 179 0 397 276 76 16 chr2 127710902 127711087 -125545496 - L1MDa LINE L1 -4660 1880 1685 227 108 0 92 chr2 127711279 127711344 -125545239 + L1MCa LINE L1 2006 2064 -4362 485 134 5 119 chr2 127711344 127711546 -125545037 + (TA)n Simple_repeat Simple_repeat 2 180 0 2486 299 88 25 chr2 127711546 127713204 -125543379 - L1MDb LINE L1 -4661 1745 16 30 27 0 0 chr2 127713671 127713708 -125542875 + AT_rich Low_complexity Low_complexity 1 37 0 420 216 157 8 chr2 127714869 127715003 -125541580 - L1MC3 LINE L1 -639 7146 6993 1270 187 80 23 chr2 127715009 127715308 -125541275 - L1MC3 LINE L1 -833 6952 6637 432 55 0 0 chr2 127715309 127715364 -125541219 + (TG)n Simple_repeat Simple_repeat 2 56 0 1344 233 29 9 chr2 127715372 127715748 -125540835 + MLT1D LTR MaLR 86 505 0 3278 287 96 21 chr2 127715760 127716432 -125540151 - L1MC3 LINE L1 -817 5329 5712 1994 120 20 3 chr2 127716432 127716733 -125539850 - AluSp SINE Alu -7 306 1 3278 287 96 21 chr2 127716733 127717539 -125539044 - L1MC3 LINE L1 -433 5713 4969 1002 201 5 5 chr2 127717528 127717742 -125538841 + L1MB3 LINE L1 5930 6143 -40 * 2167 71 0 74 chr2 127717739 127718065 -125538518 - L1PA8 LINE L1 -429 5743 5442 2892 91 2 0 chr2 127718065 127718450 -125538133 + L1PA8 LINE L1 5760 6154 -18 260 182 0 0 chr2 127718457 127718512 -125538071 + L1MB4 LINE L1 6126 6180 0 1960 234 82 14 chr2 127718517 127718695 -125537888 - L1M4 LINE L1 -1115 5031 4866 1347 218 7 20 chr2 127718695 127718989 -125537594 + AluJo SINE Alu 1 290 -22 1960 234 82 14 chr2 127718989 127719431 -125537152 - L1M4 LINE L1 -1280 4866 4369 1393 201 16 4 chr2 127719449 127719693 -125536890 + AluSx SINE Alu 1 247 -65 12639 189 39 11 chr2 127719872 127721557 -125535026 + L1M1 LINE L1 15 1651 -5914 396 0 0 0 chr2 127721557 127721601 -125534982 + (GA)n Simple_repeat Simple_repeat 2 45 0 12639 189 39 11 chr2 127721601 127722244 -125534339 + L1M1 LINE L1 1651 2274 -5291 1559 206 0 34 chr2 127722244 127722564 -125534019 + AluJb SINE Alu 3 311 -1 12639 189 39 11 chr2 127722564 127724497 -125532086 + L1M1 LINE L1 2274 4480 -3085 2099 140 34 28 chr2 127724509 127724867 -125531716 - THE1B LTR MaLR -4 360 1 9860 130 15 30 chr2 127724867 127726471 -125530112 - THE1B-int LTR MaLR 0 1580 1 1871 184 23 15 chr2 127726471 127726814 -125529769 - THE1B LTR MaLR 0 364 19 1821 215 41 4 chr2 127726918 127727383 -125529200 + L1M1 LINE L1 4558 5039 -2526 * 2493 169 20 33 chr2 127727373 127727913 -125528670 + L1M1 LINE L1 5294 5826 -1739 309 177 0 0 chr2 127727965 127728044 -125528539 + (TA)n Simple_repeat Simple_repeat 1 79 0 265 229 38 57 chr2 127728045 127728150 -125528433 - L1MC/D LINE L1 -888 5471 5369 * 8600 216 94 16 chr2 127728119 127729218 -125527365 - L1PBa LINE L1 -887 6697 5685 180 0 0 0 chr2 127729218 127729238 -125527345 + (TTG)n Simple_repeat Simple_repeat 2 21 0 8600 216 94 16 chr2 127729238 127732191 -125524392 - L1PBa LINE L1 -1899 5685 2033 3431 174 78 27 chr2 127732193 127732759 -125523824 - L1PBa LINE L1 -5704 1881 1217 2773 28 0 0 chr2 127732759 127733076 -125523507 - AluYb8 SINE Alu -1 317 1 3431 174 78 27 chr2 127733076 127733318 -125523265 - L1PBa LINE L1 -6368 1217 989 416 323 30 17 chr2 127733316 127733548 -125523035 - L1PBa LINE L1 -7341 240 6 * 2469 267 103 19 chr2 127733656 127735148 -125521435 - L1MDa LINE L1 -2452 4088 2462 682 298 19 0 chr2 127735370 127735635 -125520948 - L1MDa LINE L1 -4380 2160 1891 409 85 0 49 chr2 127735639 127735721 -125520862 + (TA)n Simple_repeat Simple_repeat 1 78 0 2136 175 164 4 chr2 127735826 127736258 -125520325 - L1PA16 LINE L1 -176 5990 5480 180 0 0 0 chr2 127736258 127736278 -125520305 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2136 175 164 4 chr2 127736278 127736303 -125520280 - L1PA16 LINE L1 -686 5480 5460 * 11997 158 29 117 chr2 127736302 127739414 -125517169 + L1P LINE L1 3 2841 -3305 2301 89 0 3 chr2 127739414 127739707 -125516876 + AluY SINE Alu 1 292 -19 2364 85 0 0 chr2 127740773 127741068 -125515515 + AluY SINE Alu 10 304 -7 8156 126 44 27 chr2 127741068 127742498 -125514085 + L1P LINE L1 2833 4286 -1860 605 93 12 0 chr2 127742522 127742608 -125513975 - Tigger1 DNA MER2_type -1464 954 868 357 178 0 41 chr2 127742613 127742640 -125513943 - L1M2 LINE L1 -482 5809 5782 252 0 0 0 chr2 127742640 127742668 -125513915 + (TA)n Simple_repeat Simple_repeat 2 29 0 357 178 0 41 chr2 127742668 127742728 -125513855 - L1M2 LINE L1 -509 5782 5725 254 51 0 0 chr2 127742722 127742761 -125513822 - L1PA6 LINE L1 -1 6153 6115 * 4460 175 51 1 chr2 127742761 127743597 -125512986 - Tigger1 DNA MER2_type -1536 882 5 233 295 65 42 chr2 127743620 127743976 -125512607 - L1M4c LINE L1 -4152 2986 2623 2605 293 68 47 chr2 127744051 127746477 -125510106 - L1M4c LINE L1 -4475 2663 20 826 247 14 107 chr2 127746498 127746911 -125509672 - L1MCb LINE L1 -2229 4335 3961 979 289 26 51 chr2 127746917 127747502 -125509081 - L1MCb LINE L1 -3338 3226 2657 1856 142 0 0 chr2 127747651 127747919 -125508664 + AluSx SINE Alu 1 268 -44 1015 281 133 9 chr2 127747969 127748404 -125508179 - L1MCb LINE L1 -5189 856 368 10620 21 3 1 chr2 127748413 127749679 -125506904 - L1P LINE L1 -754 5392 4124 1976 25 25 0 chr2 127749679 127749952 -125506631 + L1PA3 LINE L1 5905 6185 0 301 226 24 57 chr2 127750167 127750291 -125506292 + L1MC5 LINE L1 7812 7931 -30 759 299 17 38 chr2 127750296 127750587 -125505996 - L1MCb LINE L1 -5680 365 81 1400 169 0 9 chr2 127751544 127751775 -125504808 + MER30 DNA MER1_type 2 230 0 197 409 0 0 chr2 127752910 127752998 -125503585 + MIR SINE MIR 47 134 -128 2145 127 48 20 chr2 127753364 127753718 -125502865 - THE1B LTR MaLR 0 364 1 2049 123 33 3 chr2 127754176 127754477 -125502106 + AluSx SINE Alu 1 310 -2 536 204 26 0 chr2 127754782 127754895 -125501688 + MLT1B LTR MaLR 270 385 -5 1925 105 4 0 chr2 127755428 127755685 -125500898 + AluSp SINE Alu 1 258 -55 2205 184 11 9 chr2 127756227 127756677 -125499906 + L1MA3 LINE L1 5854 6304 -1 23 0 0 0 chr2 127756964 127756987 -125499596 + AT_rich Low_complexity Low_complexity 1 23 0 1558 307 180 23 chr2 127757967 127758705 -125497878 - L2 LINE L2 0 3313 2692 800 277 33 76 chr2 127758705 127759128 -125497455 + MLT1I LTR MaLR 5 409 0 1558 307 180 23 chr2 127759128 127759610 -125496973 - L2 LINE L2 -621 2692 1897 730 220 64 17 chr2 127759666 127759865 -125496718 - MSTD LTR MaLR -172 193 3 501 345 89 19 chr2 127759866 127760191 -125496392 - L2 LINE L2 -2108 1206 859 180 289 0 0 chr2 127761038 127761076 -125495507 + MIR SINE MIR 110 147 -115 580 260 125 20 chr2 127761443 127761739 -125494844 - L1ME3A LINE L1 -184 5986 5660 1274 150 157 29 chr2 127761756 127762036 -125494547 + Tigger2a DNA MER2_type 1 316 -118 24 32 0 0 chr2 127762036 127762067 -125494516 + AT_rich Low_complexity Low_complexity 1 31 0 2289 65 0 32 chr2 127762128 127762436 -125494147 + AluY SINE Alu 1 298 -13 252 281 0 0 chr2 127762452 127762509 -125494074 - L1ME3A LINE L1 -616 5548 5492 478 288 129 33 chr2 127762547 127762931 -125493652 - L1ME3A LINE L1 -743 5403 4937 1998 220 48 20 chr2 127762931 127763436 -125493147 - LTR53 LTR ERVL 0 519 1 478 288 129 33 chr2 127763436 127763663 -125492920 - L1ME3A LINE L1 -1209 4937 4733 1821 262 122 30 chr2 127763674 127764746 -125491837 - L1M4 LINE L1 -1207 4939 3769 1524 85 8 1 chr2 127765187 127765410 -125491173 + L1PA4 LINE L1 5721 5947 -208 484 57 89 0 chr2 127765514 127765637 -125490946 + (TA)n Simple_repeat Simple_repeat 1 134 0 1113 252 48 42 chr2 127765637 127766349 -125490234 - L1MC/D LINE L1 -743 5403 4750 651 259 81 40 chr2 127766384 127766681 -125489902 - L1M4 LINE L1 -1278 4868 4560 338 165 64 37 chr2 127766677 127766786 -125489797 - L1M4 LINE L1 -1074 5072 4961 * 687 266 62 57 chr2 127766786 127767192 -125489391 - L1M4 LINE L1 -1588 4558 4151 261 0 0 0 chr2 127767192 127767221 -125489362 + (T)n Simple_repeat Simple_repeat 1 29 0 23 0 0 0 chr2 127767439 127767462 -125489121 + AT_rich Low_complexity Low_complexity 1 23 0 390 81 16 0 chr2 127767631 127767693 -125488890 + L1PA4 LINE L1 6093 6155 0 628 362 73 33 chr2 127768005 127768780 -125487803 + HERV16 LTR ERVL 1365 2074 -2922 279 311 53 77 chr2 127769305 127769514 -125487069 - LTR16C LTR ERVL -13 478 275 303 364 159 17 chr2 127771894 127772303 -125484280 - L2 LINE L2 -25 3288 2822 184 235 15 44 chr2 127773522 127773590 -125482993 - MER5B DNA MER1_type -112 66 1 714 240 156 62 chr2 127773864 127774401 -125482182 + MER69 DNA AcHobo 1938 2525 -1 267 152 0 0 chr2 127776005 127776051 -125480532 + CT-rich Low_complexity Low_complexity 3 48 0 305 252 19 56 chr2 127776167 127776274 -125480309 - MIR SINE MIR -37 225 123 395 296 35 75 chr2 127776277 127776648 -125479935 + L1MEc LINE L1 777 1132 -5431 327 285 93 6 chr2 127777288 127777460 -125479123 - L1ME3 LINE L1 -21 6141 5955 301 274 75 27 chr2 127777804 127777950 -125478633 - L1MCa LINE L1 -5006 1420 1268 244 267 89 22 chr2 127778005 127778095 -125478488 - L1MCa LINE L1 -5096 1333 1238 1675 296 48 6 chr2 127778127 127778800 -125477783 + L1MEc LINE L1 1092 1792 -4592 24 32 0 0 chr2 127778872 127778903 -125477680 + AT_rich Low_complexity Low_complexity 1 31 0 250 128 35 70 chr2 127779142 127779228 -125477355 + (TATAA)n Simple_repeat Simple_repeat 3 85 0 2135 229 61 18 chr2 127779375 127779589 -125476994 + L1MEc LINE L1 2368 2571 -3811 1054 248 14 77 chr2 127779589 127780005 -125476578 + MLT1B LTR MaLR 1 390 0 2135 229 61 18 chr2 127780005 127780450 -125476133 + L1MEc LINE L1 2571 3055 -3327 270 0 0 0 chr2 127780863 127780893 -125475690 + (CA)n Simple_repeat Simple_repeat 2 31 0 1924 122 33 7 chr2 127782023 127782327 -125474256 + AluSx SINE Alu 1 312 0 1588 196 42 98 chr2 127782564 127783136 -125473447 + MER67A LTR ERV1 4 543 0 311 284 104 57 chr2 127783178 127783448 -125473135 + MLT1J LTR MaLR 237 601 -14 237 98 0 0 chr2 127784009 127784050 -125472533 + (GA)n Simple_repeat Simple_repeat 2 42 0 1860 161 14 0 chr2 127784050 127784342 -125472241 - AluSx SINE Alu -13 299 4 22 0 0 0 chr2 127784345 127784367 -125472216 + AT_rich Low_complexity Low_complexity 1 22 0 2102 103 0 3 chr2 127785286 127785590 -125470993 - AluSx SINE Alu 0 303 1 201 74 0 0 chr2 127786453 127786480 -125470103 + (CATATA)n Simple_repeat Simple_repeat 4 30 0 231 325 40 63 chr2 127787168 127787294 -125469289 - L2 LINE L2 -27 3245 3123 367 226 47 19 chr2 127787392 127787498 -125469085 - MIR SINE MIR -44 218 110 2072 115 30 3 chr2 127788015 127788319 -125468264 + AluSq SINE Alu 1 312 -1 886 239 5 10 chr2 127788682 127788887 -125467696 - L1PB4 LINE L1 -1 6155 5952 310 354 18 0 chr2 127788889 127789002 -125467581 - L1ME LINE L1 -401 5720 5606 333 265 25 25 chr2 127789731 127789893 -125466690 + HAL1 LINE L1 859 1020 -1487 198 246 131 103 chr2 127790235 127790410 -125466173 - L2 LINE L2 -8 3305 3126 25 31 0 0 chr2 127790757 127790789 -125465794 + AT_rich Low_complexity Low_complexity 1 32 0 23 33 0 0 chr2 127791283 127791313 -125465270 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 127791361 127791382 -125465201 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 127791445 127791466 -125465117 + AT_rich Low_complexity Low_complexity 1 21 0 30 100 0 0 chr2 127791587 127791687 -125464896 + AT_rich Low_complexity Low_complexity 1 100 0 713 305 119 21 chr2 127791687 127792353 -125464230 - L1ME3 LINE L1 -303 5859 5119 1485 265 116 37 chr2 127792423 127793231 -125463352 + L1M4 LINE L1 603 1474 -5068 * 5869 265 84 12 chr2 127793228 127795871 -125460712 + L1M4 LINE L1 2608 5439 -1205 244 118 0 0 chr2 127795881 127795915 -125460668 - MER76 LTR ERV -597 91 58 338 299 66 30 chr2 127795920 127796194 -125460389 - L1MCa LINE L1 -4850 1576 1157 196 250 25 75 chr2 127797938 127798018 -125458565 - L2 LINE L2 -11 3261 3186 650 35 12 0 chr2 127798255 127798340 -125458243 + (TCTA)n Simple_repeat Simple_repeat 1 86 0 1416 229 59 39 chr2 127798578 127798966 -125457617 + MSTD LTR MaLR 1 396 0 394 372 44 40 chr2 127799176 127799450 -125457133 + L2 LINE L2 2804 3078 -194 354 357 14 0 chr2 127800851 127800991 -125455592 + MIR SINE MIR 120 261 -1 678 125 34 1 chr2 127800998 127801125 -125455458 + L1PA7 LINE L1 3472 3610 -2536 5177 26 0 0 chr2 127801125 127801727 -125454856 + L1PA4 LINE L1 5546 6148 -7 * 11827 102 13 55 chr2 127801718 127804330 -125452253 + L1PA7 LINE L1 3603 6154 0 1141 186 20 122 chr2 127804917 127805320 -125451263 - MLT1A1 LTR MaLR 0 365 4 4029 180 38 11 chr2 127805546 127806184 -125450399 + L1MA5 LINE L1 4828 5447 -853 6732 66 10 1 chr2 127806184 127807363 -125449220 + L1PA7 LINE L1 4987 6173 0 4029 180 38 11 chr2 127807363 127807977 -125448606 + L1MA5 LINE L1 5447 6115 -185 238 278 22 33 chr2 127808009 127808099 -125448484 + L2 LINE L2 3184 3272 0 180 0 0 0 chr2 127808775 127808795 -125447788 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 317 166 0 41 chr2 127809431 127809679 -125446904 + (TAAA)n Simple_repeat Simple_repeat 1 237 0 306 240 133 78 chr2 127809756 127810027 -125446556 + L1ME4a LINE L1 5832 6117 -4 21 36 0 0 chr2 127810529 127810557 -125446026 + AT_rich Low_complexity Low_complexity 1 28 0 246 300 50 42 chr2 127810560 127810680 -125445903 + L3 LINE CR1 1380 1500 -77 1274 233 86 25 chr2 127811233 127811640 -125444943 - MSTB1 LTR MaLR 0 432 1 250 317 163 0 chr2 127812287 127812410 -125444173 + MIR SINE MIR 106 248 -14 29 0 0 0 chr2 127814407 127814436 -125442147 + AT_rich Low_complexity Low_complexity 1 29 0 4773 242 39 4 chr2 127817634 127818956 -125437627 - L1MB1 LINE L1 -2303 3843 2476 3796 215 55 34 chr2 127818961 127820442 -125436141 + L1MB1 LINE L1 3834 5352 -816 1640 214 34 18 chr2 127820442 127820830 -125435753 + MSTD LTR MaLR 1 394 -2 3796 215 55 34 chr2 127820830 127821275 -125435308 + L1MB1 LINE L1 5352 5786 -382 226 109 25 67 chr2 127821276 127821395 -125435188 + (TA)n Simple_repeat Simple_repeat 2 115 0 1390 175 31 70 chr2 127821395 127821415 -125435168 + L1MB1 LINE L1 5799 5818 -350 1632 179 23 52 chr2 127821415 127821762 -125434821 + MER1B DNA MER1_type 1 337 0 1390 175 31 70 chr2 127821762 127822096 -125434487 + L1MB1 LINE L1 5818 6139 -29 1110 256 29 19 chr2 127822147 127822460 -125434123 + L1M3 LINE L1 5398 5713 -470 228 260 40 72 chr2 127822670 127822920 -125433663 + L1M4 LINE L1 3401 3642 -2504 580 333 28 45 chr2 127822968 127823325 -125433258 + L1M4c LINE L1 31 381 -6003 2741 256 80 29 chr2 127823441 127824880 -125431703 + L1M4c LINE L1 575 2172 -4212 1874 241 17 27 chr2 127824918 127825399 -125431184 + L1MCa LINE L1 46 521 -5905 9982 237 46 53 chr2 127825410 127833154 -125423429 + L1ME2 LINE L1 5 7489 -113 2143 161 25 35 chr2 127833154 127833558 -125423025 + Tigger2a DNA MER2_type 1 400 -34 699 223 0 0 chr2 127833616 127833755 -125422828 + FRAM SINE Alu 1 137 -39 522 209 0 20 chr2 127833758 127833906 -125422677 + GA-rich Low_complexity Low_complexity 4 148 0 296 241 52 35 chr2 127834405 127834521 -125422062 + L2 LINE L2 2423 2540 -774 748 308 36 4 chr2 127834686 127834939 -125421644 + MIR SINE MIR 2 262 0 874 319 0 4 chr2 127835619 127835867 -125420716 + MIR SINE MIR 6 252 -10 2275 178 44 23 chr2 127835958 127836081 -125420502 - L1MB4 LINE L1 -1 6179 6060 2229 118 0 0 chr2 127836081 127836387 -125420196 - AluSq SINE Alu -7 306 1 2275 178 44 23 chr2 127836387 127836781 -125419802 - L1MB4 LINE L1 -120 6060 5651 189 0 0 0 chr2 127838310 127838331 -125418252 + (TG)n Simple_repeat Simple_repeat 2 22 0 221 212 8 38 chr2 127838353 127838485 -125418098 + (TA)n Simple_repeat Simple_repeat 2 129 0 227 151 0 38 chr2 127838485 127838538 -125418045 - LTR66 LTR ERVL -171 439 389 288 137 0 0 chr2 127839144 127839195 -125417388 + (TG)n Simple_repeat Simple_repeat 2 52 0 3020 263 34 8 chr2 127839849 127840823 -125415760 + L1MB7 LINE L1 4134 5132 -1014 1219 126 0 0 chr2 127840831 127841006 -125415577 - AluSg/x SINE Alu -1 311 137 3638 210 32 21 chr2 127841014 127841347 -125415236 + L1MB7 LINE L1 5144 5472 -712 198 103 0 0 chr2 127841347 127841376 -125415207 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 198 0 0 0 chr2 127841377 127841399 -125415184 + (CCA)n Simple_repeat Simple_repeat 1 22 0 3638 210 32 21 chr2 127841399 127842057 -125414526 + L1MB7 LINE L1 5471 6150 -34 2094 153 93 5 chr2 127843875 127844262 -125412321 + MSTA LTR MaLR 1 421 -7 291 344 39 35 chr2 127844354 127844610 -125411973 + MIR SINE MIR 2 258 -4 2896 255 83 24 chr2 127845013 127846744 -125409839 - L1MD1 LINE L1 0 6660 4826 * 3168 244 77 39 chr2 127846741 127847757 -125408826 - L1MD1 LINE L1 -4188 2376 1400 2281 100 3 0 chr2 127847757 127848057 -125408526 - AluSp SINE Alu -12 301 1 3168 244 77 39 chr2 127848057 127849231 -125407352 - L1MD1 LINE L1 -5164 1400 7 518 88 93 0 chr2 127849264 127849275 -125407308 + (TA)n Simple_repeat Simple_repeat 1 10 -276 198 0 0 0 chr2 127849275 127849297 -125407286 + (TC)n Simple_repeat Simple_repeat 2 23 0 518 88 93 0 chr2 127849297 127849526 -125407057 + (TA)n Simple_repeat Simple_repeat 10 286 0 615 58 76 23 chr2 127849549 127849720 -125406863 + (TA)n Simple_repeat Simple_repeat 1 180 0 22 35 0 0 chr2 127849720 127849749 -125406834 + AT_rich Low_complexity Low_complexity 1 29 0 323 308 84 84 chr2 127849791 127850028 -125406555 + L1M2 LINE L1 1171 1407 -5442 258 148 37 25 chr2 127850043 127850124 -125406459 + (CCGCG)n Simple_repeat Simple_repeat 5 86 0 261 0 0 0 chr2 127850765 127850794 -125405789 + (T)n Simple_repeat Simple_repeat 1 29 0 1533 231 49 59 chr2 127850794 127851386 -125405197 - L1M4 LINE L1 -1979 4167 3582 659 311 63 21 chr2 127851392 127851678 -125404905 - MLT1D LTR MaLR -82 423 126 2069 230 46 115 chr2 127851678 127852571 -125404012 - MLT1D-int LTR MaLR -526 845 15 1349 223 37 76 chr2 127852583 127853094 -125403489 - MLT1D LTR MaLR 0 505 15 293 0 27 0 chr2 127853307 127853344 -125403239 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 2092 222 19 2 chr2 127855066 127855481 -125401102 + Tigger7 DNA MER2_type 1 422 -2065 893 193 56 0 chr2 127855502 127855699 -125400884 + Tigger7 DNA MER2_type 2276 2483 -4 292 314 34 53 chr2 127856139 127856300 -125400283 - MIR SINE MIR -69 139 9 345 172 0 0 chr2 127856508 127856572 -125400011 + A-rich Low_complexity Low_complexity 1 64 0 286 275 37 28 chr2 127857829 127857938 -125398645 + MIR SINE MIR 86 195 -67 25 0 0 0 chr2 127858037 127858062 -125398521 + AT_rich Low_complexity Low_complexity 1 25 0 320 353 63 42 chr2 127859241 127859460 -125397123 - MIR SINE MIR -5 257 31 2572 43 0 0 chr2 127859460 127859760 -125396823 - AluY SINE Alu -11 300 1 320 353 63 42 chr2 127859760 127859778 -125396805 - MIR SINE MIR -231 31 15 1045 158 33 0 chr2 127861025 127861209 -125395374 - MLT1B LTR MaLR -192 198 9 670 150 0 0 chr2 127862018 127862118 -125394465 - AluS SINE Alu -213 100 1 231 211 18 18 chr2 127862218 127862275 -125394308 + (TG)n Simple_repeat Simple_repeat 2 58 0 21 0 0 0 chr2 127863073 127863094 -125393489 + AT_rich Low_complexity Low_complexity 1 21 0 731 220 43 0 chr2 127863229 127863370 -125393213 + Tigger7 DNA MER2_type 1 147 -558 7288 41 2 0 chr2 127863759 127864679 -125391904 - L1P LINE L1 -3212 2934 2013 * 12385 40 8 1 chr2 127864666 127866230 -125390353 + L1P LINE L1 2964 4537 -1609 313 210 49 12 chr2 127866359 127866440 -125390143 - Tigger5 DNA MER2_type -3 2320 2237 4569 156 1 10 chr2 127866440 127867217 -125389366 + L1PA15 LINE L1 5395 6164 -1 312 208 28 14 chr2 127867282 127867354 -125389229 - Tigger5 DNA MER2_type 0 2323 2251 226 235 20 0 chr2 127867326 127867377 -125389206 - Tigger5 DNA MER2_type -2270 53 2 * 385 235 12 0 chr2 127867378 127867459 -125389124 + Tigger7 DNA MER2_type 2409 2490 -1 845 248 78 111 chr2 127867601 127868024 -125388559 - MLT2B1 LTR ERVL 0 414 6 292 233 82 107 chr2 127871712 127871871 -125384712 + MIR SINE MIR 53 207 -55 670 244 107 86 chr2 127872025 127872500 -125384083 - LTR41 LTR ERVL -6 767 283 * 861 201 23 0 chr2 127872489 127872663 -125383920 - LTR41 LTR ERVL -592 181 4 21 0 0 0 chr2 127872686 127872707 -125383876 + AT_rich Low_complexity Low_complexity 1 21 0 207 297 14 27 chr2 127872958 127873106 -125383477 + (TA)n Simple_repeat Simple_repeat 1 146 0 237 91 0 0 chr2 127874015 127874059 -125382524 + Alu SINE Alu 257 300 0 1726 160 127 33 chr2 127874681 127875100 -125381483 + L1MA8 LINE L1 5733 6190 -101 1285 32 7 0 chr2 127875135 127875290 -125381293 - L1PA5 LINE L1 -7 6147 5992 588 143 9 0 chr2 127875291 127875396 -125381187 + L1MA8 LINE L1 6178 6283 -8 429 258 60 109 chr2 127875506 127875754 -125380829 + HAL1 LINE L1 997 1232 -1275 1802 166 3 45 chr2 127875813 127876126 -125380457 - AluSx SINE Alu -12 300 1 639 238 43 12 chr2 127876130 127876294 -125380289 + MLT1G1 LTR MaLR 9 177 -418 13555 182 64 17 chr2 127876365 127879535 -125377048 + L1PA5 LINE L1 2 3019 -3843 12279 45 1 0 chr2 127879535 127881822 -125374761 + L1PA5 LINE L1 4580 6867 -3 13555 182 64 17 chr2 127881822 127882298 -125374285 + L1PA5 LINE L1 3019 3471 -3391 2436 68 16 3 chr2 127882298 127882605 -125373978 + AluY SINE Alu 1 311 0 13555 182 64 17 chr2 127882605 127883098 -125373485 + L1PA5 LINE L1 3471 3939 -2923 2133 115 0 0 chr2 127883098 127883376 -125373207 + AluSg SINE Alu 1 278 -32 387 105 0 0 chr2 127883376 127883433 -125373150 + (TAAA)n Simple_repeat Simple_repeat 4 60 0 13555 182 64 17 chr2 127883433 127884834 -125371749 + L1PA5 LINE L1 3938 5806 -1056 1339 119 0 0 chr2 127884844 127885053 -125371530 + AluSg/x SINE Alu 106 314 0 199 53 26 26 chr2 127885172 127885210 -125371373 + (TAA)n Simple_repeat Simple_repeat 2 39 0 504 199 14 31 chr2 127887015 127887256 -125369327 + CT-rich Low_complexity Low_complexity 2 282 0 2068 136 32 26 chr2 127887256 127887595 -125368988 - THE1B LTR MaLR 0 364 24 21088 120 15 39 chr2 127887596 127889536 -125367047 + L1P3 LINE L1 3 1987 -4474 1988 116 37 3 chr2 127889536 127889830 -125366753 + AluSp SINE Alu 1 304 -9 21088 120 15 39 chr2 127889830 127892262 -125364321 + L1P3 LINE L1 1987 4376 -2085 961 117 7 0 chr2 127892262 127892391 -125364192 + L1PA7 LINE L1 6007 6152 -2 261 91 0 0 chr2 127892393 127892426 -125364157 - THE1B LTR MaLR -322 33 1 188 143 24 0 chr2 127892452 127892494 -125364089 + CT-rich Low_complexity Low_complexity 2 44 0 267 133 0 0 chr2 127892800 127892845 -125363738 + (CA)n Simple_repeat Simple_repeat 2 46 0 237 254 15 0 chr2 127892957 127893024 -125363559 + MIR SINE MIR 185 252 -10 518 345 25 0 chr2 127893061 127893261 -125363322 - MIR SINE MIR -56 206 2 243 245 63 0 chr2 127893705 127893798 -125362785 - MIR SINE MIR -63 145 53 497 281 8 0 chr2 127894170 127894291 -125362292 + MER5A DNA MER1_type 5 126 -63 721 176 20 20 chr2 127894292 127894445 -125362138 + MER34 LTR ERV1 311 463 -79 217 273 0 0 chr2 127894452 127894496 -125362087 + MER5A DNA MER1_type 146 189 0 1242 242 19 7 chr2 127894504 127894814 -125361769 - MER58B DNA MER1_type 0 341 28 417 264 144 24 chr2 127894889 127895056 -125361527 + MIR SINE MIR 59 245 -17 203 222 88 0 chr2 127895862 127895928 -125360655 + MIR SINE MIR 70 141 -67 327 214 136 10 chr2 127896006 127896109 -125360474 - MER63A DNA MER1_type -8 202 87 186 103 0 0 chr2 127896155 127896184 -125360399 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 268 100 25 0 chr2 127897213 127897253 -125359330 - L3 LINE CR1 -112 1465 1425 879 223 66 66 chr2 127897276 127897626 -125358957 - L1MA9 LINE L1 -3 6309 5960 485 162 2 12 chr2 127898254 127898347 -125358236 + L1M3 LINE L1 5598 5679 -492 652 146 0 32 chr2 127898348 127898533 -125358050 + (TA)n Simple_repeat Simple_repeat 2 180 0 299 334 71 27 chr2 127898538 127898903 -125357680 + L1PA11 LINE L1 5638 6018 -156 * 2067 196 14 5 chr2 127898576 127898995 -125357588 + L1MB3 LINE L1 5681 6103 -80 1880 110 37 7 chr2 127899043 127899342 -125357241 - AluSq SINE Alu -5 308 1 25 0 0 0 chr2 127900128 127900153 -125356430 + AT_rich Low_complexity Low_complexity 1 25 0 846 248 14 9 chr2 127900570 127900788 -125355795 - MER58B DNA MER1_type -19 322 104 183 162 0 0 chr2 127901127 127901164 -125355419 + (TAGA)n Simple_repeat Simple_repeat 4 40 0 27 0 0 0 chr2 127901320 127901347 -125355236 + AT_rich Low_complexity Low_complexity 1 27 0 22 0 0 0 chr2 127902429 127902451 -125354132 + AT_rich Low_complexity Low_complexity 1 22 0 207 114 0 0 chr2 127902474 127902509 -125354074 + (A)n Simple_repeat Simple_repeat 1 35 0 2828 10 0 0 chr2 127902913 127903221 -125353362 - AluYa5 SINE Alu -3 308 1 1514 161 28 83 chr2 127903289 127903650 -125352933 + MER61A LTR ERV1 1 341 -2 22 80 0 0 chr2 127903927 127903977 -125352606 + AT_rich Low_complexity Low_complexity 1 50 0 1271 256 87 14 chr2 127904151 127904958 -125351625 + L1MD1 LINE L1 1035 1954 -4586 1869 159 3 16 chr2 127904978 127905292 -125351291 + AluSx SINE Alu 1 310 -2 1957 132 21 1 chr2 127905308 127905338 -125351245 - L1PA11 LINE L1 -258 5896 5868 1443 162 13 76 chr2 127905338 127905640 -125350943 + AluJb SINE Alu 5 287 -15 1957 132 21 1 chr2 127905640 127905937 -125350646 - L1PA11 LINE L1 -286 5868 5563 2016 117 23 0 chr2 127905937 127906241 -125350342 + L1PA11 LINE L1 5858 6171 -3 421 248 32 25 chr2 127906339 127906496 -125350087 + L1MD1 LINE L1 2017 2174 -4366 2713 163 65 79 chr2 127906692 127907193 -125349390 + LTR8A LTR ERV1 1 492 -235 1510 160 126 0 chr2 127907193 127907456 -125349127 - AluJb SINE Alu -14 298 3 2713 163 65 79 chr2 127907456 127907641 -125348942 + LTR8A LTR ERV1 492 678 -49 386 221 0 0 chr2 127907670 127907747 -125348836 - MER6B DNA MER2_type -198 78 2 1696 267 116 32 chr2 127907756 127907899 -125348684 + L1MD1 LINE L1 2312 2442 -4098 928 42 17 0 chr2 127907899 127908018 -125348565 + L1PA4 LINE L1 6034 6154 -1 1696 267 116 32 chr2 127908018 127909415 -125347168 + L1MD1 LINE L1 2442 4049 -2491 1707 214 128 67 chr2 127909420 127910076 -125346507 - MER39 LTR ERV1 -11 642 4 214 65 32 0 chr2 127910111 127910142 -125346441 + (GAAA)n Simple_repeat Simple_repeat 4 35 0 987 162 10 3 chr2 127910145 127910446 -125346137 + GA-rich Low_complexity Low_complexity 1 304 0 1955 250 99 73 chr2 127910446 127912830 -125343753 + L1MD1 LINE L1 4083 6613 -23 190 120 0 40 chr2 127913031 127913081 -125343502 + (TAA)n Simple_repeat Simple_repeat 2 49 0 296 305 19 29 chr2 127913109 127913214 -125343369 - MIR SINE MIR -71 191 88 3591 128 6 0 chr2 127913451 127913999 -125342584 - L1PA13 LINE L1 -8 6155 5605 1542 219 27 9 chr2 127915529 127915867 -125340716 - MER4D LTR ERV1 -11 892 549 371 167 0 0 chr2 127915897 127915963 -125340620 - MER49 LTR ERV1 -638 285 220 269 296 12 0 chr2 127917349 127917430 -125339153 - L2 LINE L2 -1039 2275 2194 2209 93 7 3 chr2 127918251 127918540 -125338043 + AluSq SINE Alu 7 296 -17 5785 41 1 0 chr2 127918869 127919595 -125336988 - L1P LINE L1 -3393 2753 2027 19394 42 0 0 chr2 127919595 127922801 -125333782 + L1PA4 LINE L1 2964 6180 0 206 289 79 13 chr2 127923553 127923629 -125332954 + MIR SINE MIR 7 87 -175 560 199 118 0 chr2 127923664 127923825 -125332758 + L1MD2 LINE L1 6163 6342 -17 474 246 37 68 chr2 127923990 127924181 -125332402 - MIR SINE MIR 0 262 78 215 283 0 0 chr2 127924578 127924638 -125331945 + MIR SINE MIR 31 90 -172 474 298 58 16 chr2 127924822 127925064 -125331519 + LTR16A LTR ERVL 19 270 -180 283 285 134 32 chr2 127925500 127925604 -125330979 - L1ME3A LINE L1 -275 5895 5803 1972 88 0 32 chr2 127925604 127925888 -125330695 - L1PA7 LINE L1 -2 6152 5878 283 285 134 32 chr2 127925888 127926036 -125330547 - L1ME3A LINE L1 -367 5803 5617 309 244 244 8 chr2 127926555 127926678 -125329905 - L1 LINE L1 -2448 3698 3547 220 177 81 32 chr2 127926824 127926886 -125329697 - L2 LINE L2 0 3313 3249 21 0 0 0 chr2 127928010 127928031 -125328552 + AT_rich Low_complexity Low_complexity 1 21 0 36 0 0 0 chr2 127928057 127928093 -125328490 + AT_rich Low_complexity Low_complexity 1 36 0 24 77 0 0 chr2 127928818 127928870 -125327713 + AT_rich Low_complexity Low_complexity 1 52 0 294 29 0 0 chr2 127929118 127929153 -125327430 + (TG)n Simple_repeat Simple_repeat 2 36 0 281 118 20 0 chr2 127929874 127929925 -125326658 + (TG)n Simple_repeat Simple_repeat 2 53 0 182 91 30 0 chr2 127929960 127929993 -125326590 + (TG)n Simple_repeat Simple_repeat 2 35 0 233 57 29 0 chr2 127930026 127930061 -125326522 + (TG)n Simple_repeat Simple_repeat 2 37 0 3384 160 4 2 chr2 127930903 127931429 -125325154 - MER1A DNA MER1_type 0 527 1 906 189 17 6 chr2 127932272 127932447 -125324136 - MER58A DNA MER1_type -3 221 45 390 322 151 0 chr2 127933169 127933321 -125323262 - MER5A DNA MER1_type 0 189 15 981 251 62 42 chr2 127933529 127934103 -125322480 - MER76 LTR ERV -30 658 1 416 272 95 74 chr2 127934105 127934348 -125322235 - Charlie8 DNA MER1_type -2169 248 1 24 0 0 0 chr2 127935267 127935291 -125321292 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr2 127935467 127935489 -125321094 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 127935760 127935782 -125320801 + AT_rich Low_complexity Low_complexity 1 22 0 25 65 0 0 chr2 127935887 127935933 -125320650 + AT_rich Low_complexity Low_complexity 1 46 0 2284 91 0 10 chr2 127936113 127936411 -125320172 - AluY SINE Alu -16 295 1 3134 174 19 7 chr2 127936939 127937555 -125319028 + L1MA4A LINE L1 5674 6297 -6 404 126 0 126 chr2 127937788 127937891 -125318692 + MER41B LTR ERV1 113 202 -433 360 275 17 8 chr2 127937891 127938011 -125318572 + L1MB1 LINE L1 5962 6082 -107 1727 131 73 126 chr2 127938013 127938449 -125318134 + MER4B LTR ERV1 1 413 -197 512 147 11 11 chr2 127938900 127938995 -125317588 + MER4E LTR ERV1 672 766 0 667 192 12 76 chr2 127938999 127939171 -125317412 + L1MA10 LINE L1 6085 6245 -89 279 268 28 14 chr2 127939617 127939688 -125316895 + L2 LINE L2 3242 3313 0 2641 171 60 0 chr2 127939791 127940259 -125316324 - MER41E LTR ERV1 0 512 17 1664 190 169 25 chr2 127940830 127941350 -125315233 + LTR49 LTR ERV1 1 595 0 209 398 59 17 chr2 127941807 127941918 -125314665 - L2 LINE L2 -338 2976 2871 408 20 0 0 chr2 127941918 127941967 -125314616 + (TG)n Simple_repeat Simple_repeat 1 49 0 209 398 59 17 chr2 127941967 127942091 -125314492 - L2 LINE L2 -443 2871 2731 296 337 71 33 chr2 127943505 127943826 -125312757 + L2 LINE L2 2719 3048 -224 29 0 0 0 chr2 127944084 127944113 -125312470 + AT_rich Low_complexity Low_complexity 1 29 0 186 211 79 0 chr2 127944418 127944456 -125312127 - MER5A DNA MER1_type -78 111 71 267 409 7 14 chr2 127944616 127944758 -125311825 - MIR3 SINE MIR -67 141 1 311 306 62 44 chr2 127945531 127945691 -125310892 - MIR SINE MIR -24 238 76 206 319 96 21 chr2 127948725 127948819 -125307764 + L2 LINE L2 3122 3222 -50 401 260 163 97 chr2 127949350 127949846 -125306737 - MLT1H LTR MaLR -16 533 5 1162 189 18 4 chr2 127949981 127950208 -125306375 - MER30 DNA MER1_type 0 230 1 1147 283 19 19 chr2 127950561 127950932 -125305651 + MLT1A2 LTR MaLR 4 374 0 2282 116 0 0 chr2 127951536 127951847 -125304736 - AluSx SINE Alu -1 311 1 2178 120 3 0 chr2 127951907 127952208 -125304375 - AluSq SINE Alu -11 302 1 640 272 97 107 chr2 127952621 127953022 -125303561 - MLT1H LTR MaLR -115 434 38 25 0 0 0 chr2 127954428 127954453 -125302130 + AT_rich Low_complexity Low_complexity 1 25 0 2210 89 14 3 chr2 127954455 127954748 -125301835 + AluY SINE Alu 1 296 -15 1032 218 74 7 chr2 127954849 127955120 -125301463 - L1MC3 LINE L1 -196 7589 7301 4634 244 40 25 chr2 127955122 127957414 -125299169 - L1MC3 LINE L1 -743 5403 4264 1404 173 103 11 chr2 127957424 127957695 -125298888 - AluSx SINE Alu -4 308 13 241 196 78 20 chr2 127957718 127957820 -125298763 - L1MC3 LINE L1 -1896 4250 4143 670 164 14 14 chr2 127957820 127957966 -125298617 + CT-rich Low_complexity Low_complexity 2 147 0 1131 218 15 23 chr2 127957966 127958228 -125298355 - AluJo SINE Alu -11 301 42 771 256 43 25 chr2 127958232 127958513 -125298070 - L1MC3 LINE L1 -1978 4168 3883 1111 230 42 32 chr2 127958534 127958847 -125297736 - L1MB7 LINE L1 -23 6161 5846 4096 38 0 0 chr2 127958945 127959440 -125297143 + L1PA4 LINE L1 5661 6155 0 24 0 0 0 chr2 127960047 127960071 -125296512 + AT_rich Low_complexity Low_complexity 1 24 0 2912 129 128 116 chr2 127961058 127961319 -125295264 + LTR8A LTR ERV1 1 257 -470 1362 139 56 0 chr2 127961319 127961535 -125295048 - MER30 DNA MER1_type 0 230 3 2912 129 128 116 chr2 127961535 127961991 -125294592 + LTR8A LTR ERV1 257 727 0 376 277 92 16 chr2 127962060 127962244 -125294339 - L1MB7 LINE L1 -2311 5474 5277 557 282 73 39 chr2 127962262 127963013 -125293570 - L1MB7 LINE L1 -2513 3633 2857 1235 250 77 6 chr2 127963475 127963799 -125292784 + MER4A-int LTR ERV1 1866 2212 -4119 5421 120 70 41 chr2 127963832 127963894 -125292689 + MER4A-int LTR ERV1 198 257 -6501 2866 108 7 9 chr2 127963894 127964329 -125292254 - MER57B LTR ERV1 0 434 1 5421 120 70 41 chr2 127964329 127965221 -125291362 + MER4A-int LTR ERV1 257 1180 -5578 3456 107 95 36 chr2 127965236 127965549 -125291034 + MER4A-int LTR ERV1 947 1240 -3775 2159 113 7 0 chr2 127965549 127965840 -125290743 + AluSg SINE Alu 1 293 -17 3456 107 95 36 chr2 127965840 127966190 -125290393 + MER4A-int LTR ERV1 1240 1649 -3366 1374 158 71 0 chr2 127966191 127966431 -125290152 - LTR8 LTR ERV1 -434 257 1 3868 156 63 20 chr2 127966432 127967336 -125289247 + MER4A-int LTR ERV1 2739 3681 -2917 * 15971 112 55 15 chr2 127967335 127969990 -125286593 + MER4A-int LTR ERV1 3837 6596 -2 614 122 10 10 chr2 127969998 127970096 -125286487 + MER4A LTR ERV1 1 98 -566 1713 133 8 75 chr2 127970096 127970464 -125286119 + MER4A LTR ERV1 261 662 -2 308 307 102 24 chr2 127970676 127970842 -125285741 + L1M4 LINE L1 4158 4336 -1810 2720 257 57 59 chr2 127970842 127971289 -125285294 + L1MCb LINE L1 98 544 -5952 5617 143 47 71 chr2 127971289 127971574 -125285009 + Tigger3b DNA MER2_type 1 291 -2737 2304 82 0 7 chr2 127971574 127971868 -125284715 - AluY SINE Alu -19 292 1 5617 143 47 71 chr2 127971868 127972844 -125283739 + Tigger3b DNA MER2_type 291 1231 0 2720 257 57 59 chr2 127972844 127973924 -125282659 + L1MCb LINE L1 544 1636 -4860 404 278 81 58 chr2 127973935 127974640 -125281943 - L1M4b LINE L1 -4796 2161 1335 290 179 0 15 chr2 127975322 127975389 -125281194 + CT-rich Low_complexity Low_complexity 4 69 0 21 36 0 0 chr2 127975970 127975998 -125280585 + AT_rich Low_complexity Low_complexity 1 28 0 800 281 13 13 chr2 127977937 127978161 -125278422 + MER58A DNA MER1_type 1 224 0 203 130 0 43 chr2 127979138 127979184 -125277399 + (TATAA)n Simple_repeat Simple_repeat 1 44 0 467 332 16 48 chr2 127979985 127980298 -125276285 + L2 LINE L2 2256 2558 -756 28 91 0 0 chr2 127981180 127981257 -125275326 + AT_rich Low_complexity Low_complexity 1 77 0 240 86 0 0 chr2 127981535 127981570 -125275013 + (TG)n Simple_repeat Simple_repeat 2 36 0 459 0 0 0 chr2 127981573 127981624 -125274959 + (GA)n Simple_repeat Simple_repeat 2 52 0 180 152 0 0 chr2 127981935 127981968 -125274615 + (CATA)n Simple_repeat Simple_repeat 3 35 0 4607 217 17 8 chr2 127982288 127983560 -125273023 - L1P4 LINE L1 -694 5472 4190 7874 132 10 34 chr2 127983567 127984966 -125271617 + L1P LINE L1 4026 5391 -755 23 33 0 0 chr2 127985544 127985574 -125271009 + AT_rich Low_complexity Low_complexity 1 30 0 27 62 0 0 chr2 127985804 127985852 -125270731 + AT_rich Low_complexity Low_complexity 1 48 0 375 291 8 8 chr2 127986692 127986819 -125269764 - MER94 DNA DNA 0 134 8 2396 123 11 16 chr2 127986879 127987254 -125269329 - THE1C LTR MaLR -2 373 1 285 155 0 0 chr2 127987289 127987347 -125269236 + CT-rich Low_complexity Low_complexity 1 58 0 433 58 0 0 chr2 127987477 127987535 -125269048 - L1PA3 LINE L1 -208 5947 5896 273 57 0 0 chr2 127988805 127988840 -125267743 + (CCTA)n Simple_repeat Simple_repeat 1 35 0 22 56 0 0 chr2 127990305 127990341 -125266242 + AT_rich Low_complexity Low_complexity 1 36 0 251 132 0 0 chr2 127991116 127991154 -125265429 + L1M4 LINE L1 4888 4925 -1221 591 243 66 6 chr2 127991158 127991339 -125265244 + L1M4 LINE L1 5552 5743 -441 545 114 9 0 chr2 127991340 127991445 -125265138 + (TCTA)n Simple_repeat Simple_repeat 2 107 0 483 202 10 0 chr2 127991487 127991586 -125264997 - L1M4 LINE L1 -1776 4370 4271 1299 239 12 30 chr2 127991586 127991920 -125264663 - MLT1A2 LTR MaLR -45 329 2 532 223 11 112 chr2 127992524 127992559 -125264024 - MLT2D LTR ERVL -5 409 372 306 73 0 0 chr2 127992559 127992600 -125263983 + (TG)n Simple_repeat Simple_repeat 1 41 0 532 223 11 112 chr2 127992600 127992752 -125263831 - MLT2D LTR ERVL -42 372 241 4827 191 36 29 chr2 127992775 127993225 -125263358 - ERVL LTR ERVL 0 5764 5319 2014 138 7 0 chr2 127993225 127993521 -125263062 - AluSq SINE Alu -15 298 1 4827 191 36 29 chr2 127993521 127994077 -125262506 - ERVL LTR ERVL -445 5319 4751 8161 213 27 25 chr2 127994094 127994124 -125262459 + ERVL LTR ERVL 2042 2070 -3694 1710 147 197 11 chr2 127994124 127994485 -125262098 - MSTA LTR MaLR 0 428 1 8161 213 27 25 chr2 127994485 127995980 -125260603 + ERVL LTR ERVL 2070 3575 -2189 2119 130 10 0 chr2 127995980 127996281 -125260302 + AluSg SINE Alu 1 304 -6 8161 213 27 25 chr2 127996281 127996470 -125260113 + ERVL LTR ERVL 3575 3762 -2002 1748 84 25 0 chr2 127996475 127996712 -125259871 - MLT2A1 LTR ERVL 0 444 202 1636 195 87 6 chr2 127996812 127997146 -125259437 - Tigger7 DNA MER2_type -372 361 1 1629 96 4 28 chr2 127997177 127997428 -125259155 + L1PA8 LINE L1 5923 6167 -5 580 196 0 72 chr2 127997781 127997919 -125258664 - FLAM_C SINE Alu -5 128 1 2383 86 0 0 chr2 127997920 127998222 -125258361 - AluY SINE Alu -4 307 6 23 0 0 0 chr2 127998446 127998469 -125258114 + AT_rich Low_complexity Low_complexity 1 23 0 1551 174 13 43 chr2 127999211 127999510 -125257073 - MSTB1 LTR MaLR -50 382 93 473 286 78 42 chr2 127999747 128000030 -125256553 - L1MEc LINE L1 -3056 3159 2867 1101 307 54 63 chr2 128000121 128001555 -125255028 - L1MEc LINE L1 -4939 1457 37 1685 148 63 36 chr2 128002962 128003327 -125253256 - THE1C LTR MaLR 0 375 1 1204 122 5 16 chr2 128003327 128003516 -125253067 - THE1C-int LTR MaLR 0 1580 1394 1794 129 54 43 chr2 128003545 128003916 -125252667 - THE1C LTR MaLR 0 375 1 7403 27 1 1 chr2 128004707 128006125 -125250458 - L1PA3 LINE L1 -236 5919 4503 1631 59 0 0 chr2 128006125 128006328 -125250255 + L1PA3 LINE L1 5950 6152 -3 1554 224 129 7 chr2 128006392 128006834 -125249749 - MLT1D LTR MaLR -9 496 1 1560 273 12 79 chr2 128006892 128007459 -125249124 - MLT1D-int LTR MaLR -182 1189 661 867 233 21 17 chr2 128007594 128007830 -125248753 - MLT1D-int LTR MaLR -765 606 370 2442 189 30 10 chr2 128008753 128009257 -125247326 - L1PA16 LINE L1 -1 6165 5652 387 74 0 0 chr2 128009364 128009418 -125247165 - MLT2A1 LTR ERVL -390 54 1 19662 89 6 19 chr2 128009418 128009853 -125246730 - HERVL-A1 LTR ERVL 0 5654 5215 222 91 0 0 chr2 128009853 128009886 -125246697 + (TA)n Simple_repeat Simple_repeat 1 33 0 19662 89 6 19 chr2 128009886 128012138 -125244445 - HERVL-A1 LTR ERVL -439 5215 3003 3253 57 2 53 chr2 128012134 128012587 -125243996 - HERVL-A1 LTR ERVL -5224 430 1 * 3174 78 18 25 chr2 128012587 128013034 -125243549 - MLT2A1 LTR ERVL 0 444 1 4841 210 14 12 chr2 128013035 128014027 -125242556 + ERVL LTR ERVL 3764 4757 -1007 208 120 40 20 chr2 128014362 128014412 -125242171 + T-rich Low_complexity Low_complexity 4 54 0 2250 116 0 0 chr2 128015148 128015450 -125241133 + AluSg SINE Alu 1 302 -8 2021 169 182 19 chr2 128015516 128015988 -125240595 - MER44D DNA MER2_type 0 605 2 2440 87 36 8 chr2 128017108 128017466 -125239117 - L1PA12 LINE L1 0 6168 5801 253 368 69 21 chr2 128017733 128017877 -125238706 - L2 LINE L2 -1 3271 3121 337 253 30 0 chr2 128017985 128018084 -125238499 - L1M4 LINE L1 -3338 2808 2707 * 526 289 98 10 chr2 128018082 128018500 -125238083 - L1 LINE L1 -2285 3861 3377 434 238 43 11 chr2 128018512 128018697 -125237886 + L1ME1 LINE L1 2785 2975 -3171 540 333 42 9 chr2 128018704 128018920 -125237663 + L1ME1 LINE L1 16 238 -6171 1643 246 80 68 chr2 128018986 128020142 -125236441 + L1ME1 LINE L1 2884 4053 -2353 2590 77 23 9 chr2 128020142 128020525 -125236058 + MLT2A1 LTR ERVL 1 453 0 1448 277 37 45 chr2 128020525 128021261 -125235322 + L1ME1 LINE L1 4049 4778 -1628 285 235 151 17 chr2 128021318 128021437 -125235146 + L1ME1 LINE L1 5078 5212 -1194 1020 255 111 22 chr2 128021592 128022441 -125234142 + L1ME1 LINE L1 5310 6379 -45 557 268 92 16 chr2 128022479 128022886 -125233697 + L1ME1 LINE L1 4389 4764 -1402 372 22 0 0 chr2 128022886 128022931 -125233652 + (TG)n Simple_repeat Simple_repeat 2 46 0 557 268 92 16 chr2 128022931 128023847 -125232736 + L1ME1 LINE L1 4764 5923 -243 820 133 31 0 chr2 128023853 128023981 -125232602 - MER6 DNA MER2_type 0 865 734 244 302 70 0 chr2 128024137 128024223 -125232360 - MER5A DNA MER1_type -93 96 5 278 85 0 0 chr2 128024364 128024411 -125232172 + L1PA2 LINE L1 6109 6155 0 2063 168 70 19 chr2 128024421 128024735 -125231848 - Tigger2a DNA MER2_type -2275 433 92 186 43 0 0 chr2 128024735 128024758 -125231825 + (GGA)n Simple_repeat Simple_repeat 1 23 0 2063 168 70 19 chr2 128024758 128024855 -125231728 - Tigger2a DNA MER2_type -2616 92 1 2198 117 3 0 chr2 128025011 128025320 -125231263 + AluSp SINE Alu 1 310 -3 302 269 142 28 chr2 128025600 128025741 -125230842 - MIR SINE MIR -41 221 65 307 297 101 47 chr2 128026700 128026848 -125229735 - L2 LINE L2 0 3313 3158 1089 157 16 6 chr2 128027067 128027277 -125229306 + MLT1D LTR MaLR 1 184 -321 2224 132 19 56 chr2 128027362 128027907 -125228676 + LTR49 LTR ERV1 21 595 0 635 300 68 13 chr2 128027918 128028155 -125228428 + MLT1D LTR MaLR 256 505 0 22 70 0 0 chr2 128028543 128028586 -125227997 + AT_rich Low_complexity Low_complexity 1 43 0 207 255 0 0 chr2 128029283 128029330 -125227253 + CT-rich Low_complexity Low_complexity 2 48 0 217 300 183 25 chr2 128030344 128030464 -125226119 + L2 LINE L2 3126 3264 -8 267 31 0 0 chr2 128030837 128030869 -125225714 + (CA)n Simple_repeat Simple_repeat 1 32 0 237 119 0 0 chr2 128031076 128031118 -125225465 + (CA)n Simple_repeat Simple_repeat 1 42 0 495 349 71 25 chr2 128032115 128032508 -125224075 - L3 LINE CR1 -265 1312 902 306 385 23 6 chr2 128032723 128032897 -125223686 - L3 LINE CR1 -701 876 700 24 32 0 0 chr2 128033073 128033104 -125223479 + AT_rich Low_complexity Low_complexity 1 31 0 231 114 0 0 chr2 128033389 128033424 -125223159 + (CAT)n Simple_repeat Simple_repeat 2 36 0 2289 207 33 12 chr2 128033463 128033481 -125223102 - L1MC2 LINE L1 -2 6342 6326 1800 163 0 3 chr2 128033481 128033788 -125222795 + AluSx SINE Alu 1 306 -6 2289 207 33 12 chr2 128033788 128034280 -125222303 - L1MC2 LINE L1 -18 6326 5821 2065 95 0 27 chr2 128035365 128035693 -125220890 + AluSx SINE Alu 1 320 0 197 303 92 28 chr2 128035863 128035972 -125220611 - MIR SINE MIR -98 164 49 1959 232 70 75 chr2 128036335 128037032 -125219551 - LTR8A LTR ERV1 0 727 34 722 201 7 7 chr2 128037193 128037337 -125219246 - Tigger7 DNA MER2_type -2 2489 2346 1002 213 30 13 chr2 128037342 128037572 -125219011 - Tigger7 DNA MER2_type -81 652 419 360 167 12 36 chr2 128037804 128037888 -125218695 + MLT1D LTR MaLR 422 503 -2 310 329 94 47 chr2 128037969 128038246 -125218337 - L2 LINE L2 -752 2562 2273 21 36 0 0 chr2 128038254 128038282 -125218301 + AT_rich Low_complexity Low_complexity 1 28 0 497 94 50 46 chr2 128038314 128038604 -125217979 + (TA)n Simple_repeat Simple_repeat 1 291 0 23 0 0 0 chr2 128039099 128039122 -125217461 + AT_rich Low_complexity Low_complexity 1 23 0 356 309 176 43 chr2 128039236 128039582 -125217001 - MLT1J2 LTR MaLR -56 394 3 309 224 92 0 chr2 128041038 128041132 -125215451 - MIR SINE MIR -41 167 66 1776 48 4 0 chr2 128042103 128042332 -125214251 - L1PA4 LINE L1 -3 6152 5923 273 0 0 0 chr2 128042332 128042365 -125214218 + L1PA4 LINE L1 5868 5900 -254 218 254 56 42 chr2 128042469 128042540 -125214043 - MIR SINE MIR -19 243 172 246 289 11 11 chr2 128042678 128042768 -125213815 + (CATATA)n Simple_repeat Simple_repeat 1 90 0 * 254 233 0 17 chr2 128042709 128042769 -125213814 + (TA)n Simple_repeat Simple_repeat 2 60 0 240 35 0 0 chr2 128042770 128042799 -125213784 + (GA)n Simple_repeat Simple_repeat 1 29 0 193 115 19 19 chr2 128042912 128042964 -125213619 + T-rich Low_complexity Low_complexity 3 54 0 229 74 19 56 chr2 128043109 128043163 -125213420 + (TTTTTG)n Simple_repeat Simple_repeat 3 54 0 922 313 100 48 chr2 128043174 128044026 -125212557 + L2 LINE L2 2419 3310 -3 30 0 0 0 chr2 128044233 128044263 -125212320 + AT_rich Low_complexity Low_complexity 1 30 0 1894 223 29 59 chr2 128044263 128044859 -125211724 - L1MB5 LINE L1 -10 6164 5587 958 211 21 49 chr2 128044855 128045139 -125211444 - L1M4 LINE L1 -524 6148 5873 * 2649 266 150 44 chr2 128045110 128046511 -125210072 - L1M4 LINE L1 -1103 5541 3993 6531 75 3 5 chr2 128046631 128047485 -125209098 - L1PA8 LINE L1 -13 6159 5307 400 215 0 9 chr2 128047486 128047593 -125208990 - AluSg/x SINE Alu -12 297 192 671 99 10 0 chr2 128047704 128047805 -125208778 - L1P LINE L1 -1488 4658 4557 1643 252 73 25 chr2 128047806 128048612 -125207971 - L1M4 LINE L1 -2688 3956 3112 228 271 29 100 chr2 128048785 128048955 -125207628 - L1M4 LINE L1 -6383 159 2 219 69 0 0 chr2 128049099 128049128 -125207455 + (CATATA)n Simple_repeat Simple_repeat 2 30 0 286 219 97 53 chr2 128050333 128050447 -125206136 + MLT1I LTR MaLR 9 127 -282 1954 153 3 0 chr2 128050759 128051066 -125205517 - AluSx SINE Alu -4 308 1 289 22 43 22 chr2 128051341 128051387 -125205196 + (TTTTA)n Simple_repeat Simple_repeat 3 49 0 1885 165 3 0 chr2 128051406 128051703 -125204880 + AluSx SINE Alu 1 298 -14 185 89 45 80 chr2 128051994 128052106 -125204477 + (TTGTG)n Simple_repeat Simple_repeat 5 112 0 223 191 73 15 chr2 128053220 128053288 -125203295 + (TATATG)n Simple_repeat Simple_repeat 1 72 0 216 259 0 0 chr2 128054170 128054224 -125202359 + L2 LINE L2 2925 2978 -335 1831 126 41 10 chr2 128054290 128054583 -125202000 - AluSx SINE Alu -10 302 1 244 237 31 41 chr2 128056198 128056295 -125200288 + L1MC4a LINE L1 7403 7498 -310 445 176 0 56 chr2 128056436 128056544 -125200039 - L1MC4 LINE L1 -18 8024 7923 356 110 37 12 chr2 128056605 128056687 -125199896 + (TCTA)n Simple_repeat Simple_repeat 2 85 0 1727 237 52 53 chr2 128056697 128057012 -125199571 - L1MC4 LINE L1 -159 7883 7569 2844 81 20 0 chr2 128057012 128057406 -125199177 - L1PA10 LINE L1 -4 6164 5763 1727 237 52 53 chr2 128057406 128057749 -125198834 - L1MC4 LINE L1 -473 7569 7226 186 103 0 0 chr2 128057820 128057849 -125198734 + (TAGA)n Simple_repeat Simple_repeat 1 29 0 1072 221 36 4 chr2 128058359 128058608 -125197975 - L1MB3 LINE L1 0 6183 5927 181 333 0 0 chr2 128058608 128058656 -125197927 - L2 LINE L2 -36 3277 3230 267 31 0 0 chr2 128059883 128059915 -125196668 + (TG)n Simple_repeat Simple_repeat 1 32 0 392 310 78 17 chr2 128060695 128060927 -125195656 + L1M4 LINE L1 4285 4530 -1616 323 292 56 28 chr2 128061068 128061246 -125195337 + L1M4 LINE L1 4609 4791 -1355 556 336 107 6 chr2 128065041 128065368 -125191215 + MLT1J2 LTR MaLR 70 429 -21 287 357 45 7 chr2 128066572 128066726 -125189857 - L2 LINE L2 -17 3255 3096 1132 236 56 7 chr2 128066886 128067170 -125189413 - MLT1A1 LTR MaLR -4 361 64 464 242 97 42 chr2 128067279 128067444 -125189139 - MIR SINE MIR -1 261 88 1917 116 7 30 chr2 128069231 128069532 -125187051 + AluSc SINE Alu 1 294 -15 232 281 0 0 chr2 128069736 128069793 -125186790 + CT-rich Low_complexity Low_complexity 1 57 0 2639 132 16 21 chr2 128070200 128070633 -125185950 + MER39B LTR ERV1 3 433 -220 927 113 33 0 chr2 128071645 128071795 -125184788 - L1MA2 LINE L1 0 6304 6150 764 194 7 0 chr2 128071911 128072050 -125184533 - LTR69 LTR ERVL -19 569 430 2423 169 11 50 chr2 128072065 128072543 -125184040 - LTR69 LTR ERVL -125 463 5 335 311 10 0 chr2 128074282 128074385 -125182198 + L2 LINE L2 2383 2486 -828 611 157 64 41 chr2 128074436 128074608 -125181975 - L1MC3 LINE L1 -90 7695 7520 608 224 48 12 chr2 128074608 128074773 -125181810 + MLT1A2 LTR MaLR 1 171 -203 3348 149 23 19 chr2 128074951 128075600 -125180983 + L1MA3 LINE L1 5654 6305 0 242 209 171 9 chr2 128076039 128076144 -125180439 + L1P2 LINE L1 5318 5439 -716 269 254 190 28 chr2 128076475 128076759 -125179824 + L1ME4a LINE L1 5783 6112 -9 431 279 25 16 chr2 128077547 128077669 -125178914 - MIR SINE MIR -92 170 48 488 390 31 4 chr2 128078118 128078346 -125178237 + MIR SINE MIR 22 255 -7 498 307 45 6 chr2 128078472 128078648 -125177935 - LTR33 LTR ERVL -2 519 337 1952 158 0 0 chr2 128079370 128079668 -125176915 - AluSx SINE Alu -14 298 1 306 307 16 79 chr2 128079704 128079893 -125176690 + L2 LINE L2 3105 3281 -32 21 36 0 0 chr2 128080752 128080780 -125175803 + AT_rich Low_complexity Low_complexity 1 28 0 324 48 0 0 chr2 128081187 128081229 -125175354 + (TG)n Simple_repeat Simple_repeat 1 42 0 2304 110 3 0 chr2 128082305 128082613 -125173970 + AluSp SINE Alu 1 309 -4 271 360 118 14 chr2 128082637 128082848 -125173735 + L2 LINE L2 3075 3307 -6 187 348 28 71 chr2 128083394 128083535 -125173048 - MIR SINE MIR -113 149 15 759 259 91 22 chr2 128083581 128084028 -125172555 + MLT1E LTR MaLR 93 591 -2 299 85 21 0 chr2 128084079 128084126 -125172457 + (TTTC)n Simple_repeat Simple_repeat 4 51 0 269 77 51 0 chr2 128084132 128084171 -125172412 - L1MB1 LINE L1 -1 6167 6127 212 367 0 13 chr2 128084184 128084263 -125172320 + MIR3 SINE MIR 79 156 -52 235 401 23 33 chr2 128085016 128085318 -125171265 - L2 LINE L2 -582 2732 2434 2177 43 14 0 chr2 128085490 128085769 -125170814 + L1PA4 LINE L1 5873 6155 0 302 294 37 0 chr2 128086004 128086113 -125170470 + MLT1J1 LTR MaLR 3 115 -331 928 232 64 72 chr2 128086259 128086604 -125169979 - MLT1A1 LTR MaLR -13 352 11 422 208 30 10 chr2 128086677 128086778 -125169805 + MLT1B LTR MaLR 270 372 -18 202 343 60 40 chr2 128086838 128086914 -125169669 + L2 LINE L2 2148 2221 -1093 3127 215 81 3 chr2 128086914 128087593 -125168990 - MER44D DNA MER2_type -1 604 1 202 343 60 40 chr2 128087593 128087717 -125168866 + L2 LINE L2 2221 2352 -962 1418 263 139 25 chr2 128088885 128089447 -125167136 + MLT1E2 LTR MaLR 1 626 0 2258 116 48 20 chr2 128089481 128089835 -125166748 - THE1B LTR MaLR 0 364 1 9720 170 34 0 chr2 128089835 128091363 -125165220 - THE1B-int LTR MaLR 0 1580 1 2110 120 49 57 chr2 128091363 128091730 -125164853 - THE1B LTR MaLR 0 364 1 1858 203 0 16 chr2 128092992 128093356 -125163227 + MLT1A2 LTR MaLR 1 358 -16 319 65 0 12 chr2 128093503 128093560 -125163023 + Alu SINE Alu 1 39 -262 1378 115 0 0 chr2 128093560 128093743 -125162840 + AluSg/x SINE Alu 101 283 -27 1466 225 0 13 chr2 128094343 128094654 -125161929 - AluJo SINE Alu -5 307 1 452 336 132 11 chr2 128094687 128095050 -125161533 + L2 LINE L2 1239 1645 -1669 837 211 93 20 chr2 128095201 128095447 -125161136 - L1MA10 LINE L1 0 6334 6071 879 146 31 0 chr2 128095479 128095609 -125160974 - AluJo SINE Alu -176 136 3 6572 144 60 31 chr2 128095707 128096260 -125160323 - L1PA13 LINE L1 -2 6161 5626 1804 178 3 0 chr2 128096260 128096558 -125160025 - AluSx SINE Alu -10 302 4 6572 144 60 31 chr2 128096558 128097798 -125158785 - L1PA13 LINE L1 -537 5626 4312 5953 93 42 3 chr2 128097798 128099318 -125157265 - L1PA10 LINE L1 0 6168 4591 6572 144 60 31 chr2 128099318 128099625 -125156958 - L1PA13 LINE L1 -1851 4312 4015 367 313 124 14 chr2 128099696 128099913 -125156670 + L2 LINE L2 2096 2336 -978 861 251 143 11 chr2 128100078 128100441 -125156142 - L1ME3A LINE L1 -236 5934 5524 359 341 14 33 chr2 128100443 128100654 -125155929 + L2 LINE L2 2329 2535 -779 207 69 0 0 chr2 128100702 128100731 -125155852 + (TATATG)n Simple_repeat Simple_repeat 2 30 0 228 291 0 70 chr2 128100838 128100924 -125155659 + L2 LINE L2 3193 3272 0 24 67 0 0 chr2 128101143 128101188 -125155395 + AT_rich Low_complexity Low_complexity 1 45 0 401 266 112 7 chr2 128101915 128102058 -125154525 + MIR SINE MIR 57 214 -48 210 239 0 0 chr2 128103039 128103085 -125153498 + CT-rich Low_complexity Low_complexity 4 49 0 206 254 15 0 chr2 128103993 128104060 -125152523 + (TA)n Simple_repeat Simple_repeat 2 69 0 1345 224 42 92 chr2 128104116 128104309 -125152274 + MLT1D LTR MaLR 1 202 -303 3195 117 31 0 chr2 128104309 128104795 -125151788 + L1PA13 LINE L1 5652 6152 -11 1345 224 42 92 chr2 128104795 128105131 -125151452 + MLT1D LTR MaLR 202 503 -2 798 181 18 6 chr2 128105326 128105492 -125151091 + MER39B LTR ERV1 486 653 0 232 237 17 17 chr2 128106172 128106231 -125150352 + MER31B LTR ERV1 386 444 -22 382 283 71 0 chr2 128106245 128106358 -125150225 + MIR SINE MIR 90 210 -52 38 0 0 0 chr2 128106413 128106451 -125150132 + AT_rich Low_complexity Low_complexity 1 38 0 1147 179 66 0 chr2 128106520 128106732 -125149851 + L1M1 LINE L1 791 1016 -6549 2050 112 3 46 chr2 128107312 128107616 -125148967 + AluSq SINE Alu 1 291 -22 17645 187 42 17 chr2 128108052 128110350 -125146233 + L1MA2 LINE L1 19 2258 -5465 1683 123 51 0 chr2 128110350 128110603 -125145980 + AluSg SINE Alu 40 305 -5 17645 187 42 17 chr2 128110603 128112191 -125144392 + L1MA2 LINE L1 2258 3804 -3919 4302 174 63 47 chr2 128112191 128113245 -125143338 - MER11C LTR ERVK 0 1071 1 17645 187 42 17 chr2 128113245 128114926 -125141657 + L1MA2 LINE L1 3804 5441 -2282 720 150 0 16 chr2 128114926 128115053 -125141530 + L1PB1 LINE L1 6027 6151 0 17645 187 42 17 chr2 128115053 128116750 -125139833 + L1MA2 LINE L1 5441 7485 -238 186 43 0 0 chr2 128116750 128116773 -125139810 + (TAA)n Simple_repeat Simple_repeat 2 24 0 17645 187 42 17 chr2 128116773 128117010 -125139573 + L1MA2 LINE L1 7485 7715 -8 315 332 131 19 chr2 128117122 128117336 -125139247 - MIR SINE MIR -7 255 18 24 0 0 0 chr2 128118220 128118244 -125138339 + AT_rich Low_complexity Low_complexity 1 24 0 225 279 19 29 chr2 128119045 128119149 -125137434 + MLT1J LTR MaLR 4 106 -405 325 335 47 21 chr2 128119356 128119547 -125137036 + MLT1J LTR MaLR 314 509 -2 194 350 0 0 chr2 128121006 128121066 -125135517 - MIR SINE MIR -154 108 49 1496 305 98 28 chr2 128121240 128121886 -125134697 - L2 LINE L2 -548 2766 2076 26764 27 1 0 chr2 128122522 128126506 -125130077 + L1PA3 LINE L1 2166 6155 0 539 263 57 79 chr2 128127554 128128060 -125128523 + HAL1b LINE L1 136 630 -718 24 0 0 0 chr2 128128144 128128168 -125128415 + AT_rich Low_complexity Low_complexity 1 24 0 1303 199 84 11 chr2 128128268 128128530 -125128053 + AluJb SINE Alu 15 295 -17 228 264 0 0 chr2 128128531 128128603 -125127980 + L1MC4 LINE L1 6632 6703 -1339 * 239 156 0 0 chr2 128128576 128128621 -125127962 - L1MC4 LINE L1 -1340 6702 6658 390 260 10 0 chr2 128128821 128128921 -125127662 + MER58B DNA MER1_type 241 341 0 23 54 0 0 chr2 128128921 128128958 -125127625 + AT_rich Low_complexity Low_complexity 1 37 0 21 57 0 0 chr2 128129403 128129438 -125127145 + AT_rich Low_complexity Low_complexity 1 35 0 1970 133 37 0 chr2 128130509 128130809 -125125774 + AluSx SINE Alu 1 311 -1 423 138 191 0 chr2 128131706 128131800 -125124783 + MLT1B LTR MaLR 1 112 -278 21 36 0 0 chr2 128132492 128132520 -125124063 + AT_rich Low_complexity Low_complexity 1 28 0 185 86 57 0 chr2 128133772 128133807 -125122776 + T-rich Low_complexity Low_complexity 3 39 0 1028 212 15 5 chr2 128133820 128134023 -125122560 - AluJo SINE Alu -24 288 84 393 348 17 0 chr2 128134061 128134176 -125122407 + L2 LINE L2 3155 3271 -1 192 40 0 0 chr2 128134328 128134353 -125122230 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 195 315 92 62 chr2 128134501 128134631 -125121952 - MIR3 SINE MIR -14 194 61 1841 191 9 35 chr2 128134693 128134877 -125121706 - L1MA10 LINE L1 -1 6333 6146 189 74 0 0 chr2 128134877 128134904 -125121679 + (TTTAG)n Simple_repeat Simple_repeat 5 31 0 1841 191 9 35 chr2 128134904 128135143 -125121440 - L1MA10 LINE L1 -188 6146 5921 1356 220 118 27 chr2 128135493 128135934 -125120649 - L1MD2 LINE L1 -228 6131 5651 670 289 76 14 chr2 128135936 128136147 -125120436 + MER58A DNA MER1_type 1 224 0 1071 265 82 11 chr2 128136202 128136702 -125119881 + MLT1E LTR MaLR 13 593 0 2324 256 61 48 chr2 128136724 128136948 -125119635 - L1MD2 LINE L1 -743 5403 5183 1460 163 86 50 chr2 128136948 128137310 -125119273 + THE1C LTR MaLR 1 375 0 2324 256 61 48 chr2 128137310 128138241 -125118342 - L1MD2 LINE L1 -963 5183 4407 2290 91 0 0 chr2 128138241 128138537 -125118046 + AluSg SINE Alu 3 298 -12 2324 256 61 48 chr2 128138537 128138876 -125117707 - L1MD2 LINE L1 -1739 4407 4074 238 406 46 10 chr2 128139381 128139578 -125117005 - MIR SINE MIR -30 232 29 21 0 0 0 chr2 128141723 128141744 -125114839 + AT_rich Low_complexity Low_complexity 1 21 0 313 219 51 102 chr2 128141869 128142006 -125114577 + MER58 DNA MER1_type 4 133 -208 250 268 14 42 chr2 128142199 128142270 -125114313 + MER5A DNA MER1_type 120 188 -1 279 357 0 0 chr2 128143016 128143114 -125113469 - MIR SINE MIR -12 250 153 22 70 0 0 chr2 128143602 128143645 -125112938 + AT_rich Low_complexity Low_complexity 1 43 0 283 316 90 23 chr2 128144206 128144339 -125112244 - MIR SINE MIR -38 224 83 21 36 0 0 chr2 128144847 128144875 -125111708 + AT_rich Low_complexity Low_complexity 1 28 0 375 397 45 35 chr2 128145553 128146121 -125110462 + L2 LINE L2 2446 3035 -237 219 355 33 8 chr2 128146786 128146907 -125109676 - MIR SINE MIR -61 201 78 1342 149 203 4 chr2 128147117 128147358 -125109225 + AluSx SINE Alu 1 289 -23 381 93 0 0 chr2 128148341 128148395 -125108188 + (TG)n Simple_repeat Simple_repeat 1 54 0 756 187 29 175 chr2 128148890 128149211 -125107372 - MLT1A1 LTR MaLR -12 353 103 2289 117 0 0 chr2 128149211 128149519 -125107064 - AluSg SINE Alu -2 308 1 756 187 29 175 chr2 128149519 128149608 -125106975 - MLT1A1 LTR MaLR -262 103 3 975 114 117 22 chr2 128150529 128150750 -125105833 - LTR7 LTR ERV1 -152 298 1 1807 174 11 15 chr2 128150757 128151288 -125105295 - HERVH LTR ERV1 -2297 4232 3806 * 7207 160 2 12 chr2 128151282 128152548 -125104035 - HERVH LTR ERV1 -4126 3587 2335 4950 125 33 7 chr2 128152643 128153403 -125103180 + LTR17 LTR ERV1 1 780 0 269 156 0 16 chr2 128153719 128153738 -125102845 + GA-rich Low_complexity Low_complexity 3 21 -44 4537 136 16 45 chr2 128153738 128154540 -125102043 + MER4E LTR ERV1 1 779 0 269 156 0 16 chr2 128154540 128154584 -125101999 + GA-rich Low_complexity Low_complexity 21 65 0 1233 159 44 112 chr2 128155436 128155757 -125100826 - AluJo SINE Alu -3 299 1 24 0 0 0 chr2 128156517 128156541 -125100042 + AT_rich Low_complexity Low_complexity 1 24 0 508 276 33 0 chr2 128156551 128156703 -125099880 + MER46C DNA MER2_type 68 224 -114 1041 179 0 21 chr2 128156839 128157065 -125099518 + AluJb SINE Alu 111 312 0 2004 152 48 22 chr2 128157189 128157544 -125099039 - THE1B LTR MaLR 0 364 1 2171 123 0 0 chr2 128157653 128157945 -125098638 - AluSx SINE Alu -20 292 1 223 345 99 0 chr2 128159050 128159192 -125097391 + L2 LINE L2 2687 2842 -472 27 29 0 0 chr2 128159360 128159394 -125097189 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr2 128159471 128159492 -125097091 + AT_rich Low_complexity Low_complexity 1 21 0 569 317 106 31 chr2 128159597 128159861 -125096722 - MLT1J2 LTR MaLR 0 450 150 2272 183 62 9 chr2 128159861 128160299 -125096284 - LOR1b LTR ERV1 0 461 1 569 317 106 31 chr2 128160299 128160394 -125096189 - MLT1J2 LTR MaLR -300 150 64 355 329 64 78 chr2 128160660 128160860 -125095723 + MLT1K LTR MaLR 95 296 -292 189 0 0 0 chr2 128160860 128160881 -125095702 + (TTG)n Simple_repeat Simple_repeat 1 21 0 355 329 64 78 chr2 128160881 128161181 -125095402 + MLT1K LTR MaLR 296 588 0 309 290 29 0 chr2 128161611 128161749 -125094834 + (TA)n Simple_repeat Simple_repeat 1 142 0 1878 182 15 6 chr2 128161869 128162210 -125094373 - MER7A DNA MER2_type 0 346 5 29 28 0 0 chr2 128163844 128163880 -125092703 + AT_rich Low_complexity Low_complexity 1 36 0 361 271 174 26 chr2 128164975 128165130 -125091453 + L2 LINE L2 2340 2517 -797 304 279 25 16 chr2 128165816 128165938 -125090645 + L1M3c LINE L1 904 1026 -5115 806 273 107 49 chr2 128165941 128166286 -125090297 + MLT1A1 LTR MaLR 1 365 0 2617 230 30 44 chr2 128166296 128167183 -125089400 + L1M4c LINE L1 801 1675 -4709 977 185 42 9 chr2 128167219 128167435 -125089148 + L1MC1 LINE L1 6111 6333 0 2994 196 40 12 chr2 128167445 128168127 -125088456 + L1MB3 LINE L1 5476 6176 -7 570 322 60 42 chr2 128168132 128168514 -125088069 + L2 LINE L2 2904 3292 -21 23 0 0 0 chr2 128168725 128168748 -125087835 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 29 chr2 128169063 128169075 -125087508 + AT_rich Low_complexity Low_complexity 1 12 -22 2168 105 3 14 chr2 128169075 128169370 -125087213 - AluSq SINE Alu -21 292 1 24 0 0 29 chr2 128169370 128169392 -125087191 + AT_rich Low_complexity Low_complexity 12 34 0 32 26 0 0 chr2 128169504 128169543 -125087040 + AT_rich Low_complexity Low_complexity 1 39 0 23 0 0 0 chr2 128170680 128170703 -125085880 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr2 128171385 128171411 -125085172 + AT_rich Low_complexity Low_complexity 1 26 0 516 274 64 41 chr2 128171699 128171972 -125084611 - L1MC5 LINE L1 -1005 6803 6565 234 178 0 0 chr2 128173001 128173046 -125083537 + T-rich Low_complexity Low_complexity 4 48 0 4075 55 57 0 chr2 128173240 128173768 -125082815 + LTR6B LTR ERV1 1 558 0 9270 115 37 44 chr2 128173769 128174210 -125082373 + HERVS71 LTR ERV1 1 443 -8535 709 11 22 0 chr2 128174210 128174300 -125082283 + (TC)n Simple_repeat Simple_repeat 1 92 0 9270 115 37 44 chr2 128174300 128174400 -125082183 + HERVS71 LTR ERV1 443 542 -8436 591 10 62 0 chr2 128174400 128174496 -125082087 + (TC)n Simple_repeat Simple_repeat 1 102 0 9270 115 37 44 chr2 128174496 128175375 -125081208 + HERVS71 LTR ERV1 542 1413 -7565 5471 132 102 105 chr2 128175375 128178155 -125078428 + pTR5 LTR ERV1 743 2438 0 12917 104 8 1 chr2 128178158 128179972 -125076611 + HERVS71 LTR ERV1 1410 3236 -5742 5389 132 38 5 chr2 128179954 128180789 -125075794 + HERVS71 LTR ERV1 4803 5665 -3313 * 12006 100 7 0 chr2 128180786 128182471 -125074112 + HERVS71 LTR ERV1 6091 7786 -1192 2244 95 3 0 chr2 128182468 128182783 -125073800 + HERVS71 LTR ERV1 8594 8909 -69 * 4042 48 63 0 chr2 128182783 128183308 -125073275 + LTR6B LTR ERV1 1 558 0 6125 188 106 40 chr2 128184021 128185826 -125070757 + L1MC3 LINE L1 251 2174 -4252 1365 184 17 75 chr2 128185822 128186181 -125070402 + L1MC1 LINE L1 5995 6332 -1 * 358 291 97 8 chr2 128186646 128186780 -125069803 + MIR SINE MIR 30 175 -87 981 171 0 6 chr2 128189508 128189666 -125066917 + FRAM SINE Alu 1 153 -23 198 204 34 0 chr2 128189667 128189755 -125066828 + (TA)n Simple_repeat Simple_repeat 1 91 0 325 283 0 11 chr2 128189757 128189849 -125066734 + L1MC4 LINE L1 6614 6704 -1338 207 156 0 0 chr2 128190090 128190123 -125066460 + (TG)n Simple_repeat Simple_repeat 1 33 0 2208 107 3 0 chr2 128191345 128191635 -125064948 + AluSp SINE Alu 1 291 -22 28 0 0 0 chr2 128191740 128191768 -125064815 + AT_rich Low_complexity Low_complexity 1 28 0 6135 232 37 33 chr2 128192148 128192364 -125064219 + L1MC3 LINE L1 4480 4694 -3371 556 37 37 0 chr2 128192364 128192446 -125064137 + (TCTA)n Simple_repeat Simple_repeat 1 85 0 6135 232 37 33 chr2 128192446 128195118 -125061465 + L1MC3 LINE L1 4694 7377 -688 376 203 0 0 chr2 128195118 128195192 -125061391 + MLT1F1 LTR MaLR 35 108 -459 2116 75 11 0 chr2 128195192 128195502 -125061081 - AluY SINE Alu 0 313 1 507 147 74 0 chr2 128195503 128195598 -125060985 + L1MC3 LINE L1 7437 7538 -527 40579 37 22 1 chr2 128195765 128201662 -125054921 + L1PA3 LINE L1 11 6033 -122 3926 35 2 0 chr2 128201766 128202257 -125054326 - L1P LINE L1 -1142 5004 4513 4332 18 4 2 chr2 128202257 128202744 -125053839 + L1PA2 LINE L1 5647 6152 -3 1153 230 77 20 chr2 128202795 128203199 -125053384 - L1MB4 LINE L1 -17 6661 6235 * 1316 256 94 59 chr2 128203195 128204262 -125052321 - L1MB4 LINE L1 -1481 5163 4060 2117 209 70 12 chr2 128204265 128204776 -125051807 - MER74A LTR ERVL -2 556 16 2408 275 39 28 chr2 128204776 128206105 -125050478 - L1MB4 LINE L1 -2588 4056 2713 210 91 0 0 chr2 128206178 128206211 -125050372 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 563 204 23 0 chr2 128206239 128206371 -125050212 - L1MB4 LINE L1 -5584 958 824 331 257 42 76 chr2 128206454 128206598 -125049985 - L1MB4 LINE L1 -5724 922 784 423 56 42 0 chr2 128206740 128206811 -125049772 + (TTTC)n Simple_repeat Simple_repeat 3 76 0 1508 223 16 7 chr2 128206825 128207134 -125049449 - AluJo SINE Alu 0 312 1 267 106 106 0 chr2 128207933 128207980 -125048603 - MIR SINE MIR -116 146 95 305 333 21 0 chr2 128208140 128208236 -125048347 + L2 LINE L2 3159 3256 -16 252 416 9 0 chr2 128208593 128208706 -125047877 + L2 LINE L2 2934 3047 -225 936 301 28 11 chr2 128209264 128209620 -125046963 + L1MEc LINE L1 237 598 -5798 1222 273 105 27 chr2 128209635 128210522 -125046061 + L1MEc LINE L1 662 1617 -4779 2729 261 58 25 chr2 128210526 128211888 -125044695 + L1MEc LINE L1 2661 4067 -2148 1971 111 0 0 chr2 128212169 128212458 -125044125 - AluSq SINE Alu 0 310 22 2926 204 47 1 chr2 128213028 128213686 -125042897 - L1MB2 LINE L1 -9 6162 5475 1928 101 0 8 chr2 128214611 128214869 -125041714 - AluSg1 SINE Alu -5 304 49 4751 182 154 33 chr2 128215515 128216946 -125039637 - L1MB2 LINE L1 -1287 4859 3255 5921 23 0 0 chr2 128217437 128218466 -125038117 - L1P1 LINE L1 -476 5679 4651 181 327 106 9 chr2 128218625 128218738 -125037845 - MIR SINE MIR -136 126 3 1592 93 21 21 chr2 128220350 128220586 -125035997 - AluSc SINE Alu 0 309 74 249 139 0 0 chr2 128220592 128220628 -125035955 - AluSc SINE Alu -266 36 1 202 353 98 30 chr2 128220629 128220762 -125035821 - L2 LINE L2 -21 3251 3110 1245 217 144 38 chr2 128220944 128221395 -125035188 - MLT1D LTR MaLR -3 502 4 2029 138 0 3 chr2 128221641 128221937 -125034646 - AluSq SINE Alu -14 299 5 23 0 0 0 chr2 128222032 128222055 -125034528 + AT_rich Low_complexity Low_complexity 1 23 0 524 274 26 26 chr2 128222627 128222817 -125033766 - MER3 DNA MER1_type -14 195 6 2108 122 7 0 chr2 128222844 128223140 -125033443 + AluSx SINE Alu 1 298 -14 1333 215 101 18 chr2 128223364 128223750 -125032833 - LTR52 LTR ERVL -3 418 1 276 279 0 0 chr2 128224208 128224276 -125032307 + MLT1E3 LTR MaLR 3 70 -584 351 221 323 0 chr2 128224328 128224455 -125032128 + MLT1E3 LTR MaLR 133 300 -324 227 288 106 6 chr2 128224602 128224772 -125031811 + MARNA DNA Mariner 86 272 -314 310 309 22 72 chr2 128225289 128225470 -125031113 - MIR SINE MIR -6 256 85 2188 118 0 13 chr2 128225608 128225914 -125030669 + AluY SINE Alu 1 302 -9 313 281 181 47 chr2 128227144 128227315 -125029268 - MIR SINE MIR -27 235 42 813 161 36 0 chr2 128227628 128227796 -125028787 + L1MA6 LINE L1 6127 6300 0 848 280 120 72 chr2 128227817 128228251 -125028332 + MLT1E LTR MaLR 114 593 0 1652 183 10 10 chr2 128228623 128228934 -125027649 - AluJo SINE Alu -1 311 1 584 278 65 41 chr2 128229971 128230216 -125026367 - Charlie8 DNA MER1_type -2141 276 26 1568 221 58 13 chr2 128230539 128230933 -125025650 - MLT2D LTR ERVL -2 412 1 23 33 0 0 chr2 128231377 128231407 -125025176 + AT_rich Low_complexity Low_complexity 1 30 0 8423 259 48 14 chr2 128231880 128236977 -125019606 - L1MB4 LINE L1 -320 6358 978 219 114 0 0 chr2 128236977 128237012 -125019571 + (TATG)n Simple_repeat Simple_repeat 2 36 0 8423 259 48 14 chr2 128237012 128237173 -125019410 - L1MB4 LINE L1 -5700 978 824 386 260 48 27 chr2 128237671 128237817 -125018766 - L1MB4 LINE L1 -6331 211 63 30 0 0 0 chr2 128238186 128238216 -125018367 + AT_rich Low_complexity Low_complexity 1 30 0 190 394 29 24 chr2 128239294 128239464 -125017119 - MIR SINE MIR -74 188 18 26 64 0 0 chr2 128239697 128239744 -125016839 + AT_rich Low_complexity Low_complexity 1 47 0 2080 117 0 0 chr2 128240887 128241191 -125015392 + AluSx SINE Alu 1 304 0 1593 278 54 46 chr2 128241228 128241858 -125014725 + L1ME1 LINE L1 5474 6108 -58 33 0 0 0 chr2 128241910 128241943 -125014640 + AT_rich Low_complexity Low_complexity 1 33 0 1347 176 96 8 chr2 128242765 128242870 -125013713 + AluJo SINE Alu 1 95 -217 180 0 0 0 chr2 128242870 128242890 -125013693 + (CAA)n Simple_repeat Simple_repeat 2 21 0 424 64 11 43 chr2 128242892 128242986 -125013597 + (TA)n Simple_repeat Simple_repeat 1 91 0 1347 176 96 8 chr2 128242986 128243138 -125013445 + AluJo SINE Alu 95 284 -28 270 176 0 0 chr2 128243225 128243276 -125013307 + (CATA)n Simple_repeat Simple_repeat 2 52 0 330 230 0 40 chr2 128243281 128243381 -125013202 + L1MC4 LINE L1 6614 6709 -1333 3016 231 54 24 chr2 128243386 128243796 -125012787 - L1MB8 LINE L1 -50 6128 5732 2172 113 6 10 chr2 128243796 128244107 -125012476 - AluSg SINE Alu 0 310 1 3016 231 54 24 chr2 128244107 128244660 -125011923 - L1MB8 LINE L1 -446 5732 5147 606 341 10 10 chr2 128245099 128245307 -125011276 + MLT1I LTR MaLR 187 394 -15 22 35 0 0 chr2 128245832 128245861 -125010722 + AT_rich Low_complexity Low_complexity 1 29 0 439 290 95 10 chr2 128246315 128246515 -125010068 + MIR SINE MIR 20 236 -26 210 275 217 0 chr2 128246526 128246595 -125009988 - MIR SINE MIR -65 143 60 243 244 79 87 chr2 128246857 128246984 -125009599 + MER94 DNA DNA 9 134 0 287 309 46 4 chr2 128248166 128248308 -125008275 - MIR SINE MIR -62 146 5 519 17 0 0 chr2 128248737 128248797 -125007786 + (CA)n Simple_repeat Simple_repeat 1 60 0 398 311 30 3 chr2 128249881 128250085 -125006498 + L1M4 LINE L1 4827 5039 -1107 551 269 55 7 chr2 128250481 128250626 -125005957 - LTR33 LTR ERVL -357 164 13 430 324 22 0 chr2 128250626 128250805 -125005778 + L1M4 LINE L1 4660 4842 -1304 204 158 0 26 chr2 128250857 128250895 -125005688 + A-rich Low_complexity Low_complexity 3 39 0 1159 312 82 26 chr2 128251289 128251828 -125004755 - L2 LINE L2 -1776 1538 970 655 336 91 30 chr2 128251829 128251959 -125004624 - L2 LINE L2 -2630 684 563 205 51 51 0 chr2 128251959 128251998 -125004585 + T-rich Low_complexity Low_complexity 2 42 0 655 336 91 30 chr2 128251998 128252307 -125004276 - L2 LINE L2 -2751 563 218 589 306 31 5 chr2 128252307 128252529 -125004054 - L2 LINE L2 -770 2544 2317 532 274 64 127 chr2 128252605 128253208 -125003375 - L1ME3A LINE L1 0 6170 5624 2005 154 0 20 chr2 128253208 128253558 -125003025 - MER61A LTR ERV1 0 343 1 532 274 64 127 chr2 128253558 128253663 -125002920 - L1ME3A LINE L1 -546 5624 5514 305 259 39 121 chr2 128253750 128253982 -125002601 + MER69 DNA AcHobo 288 500 -2026 549 170 60 175 chr2 128254055 128254420 -125002163 + MER69 DNA AcHobo 1619 1941 -585 1143 22 0 0 chr2 128254454 128254589 -125001994 - L1P2 LINE L1 -545 5609 5475 2524 16 3 7 chr2 128254598 128254901 -125001682 - L1PA2 LINE L1 0 6155 5854 4752 30 0 0 chr2 128254901 128255457 -125001126 + L1PA5 LINE L1 5591 6148 -6 875 205 133 11 chr2 128255485 128255763 -125000820 + MER69 DNA AcHobo 2010 2321 -205 1658 128 93 19 chr2 128255782 128256095 -125000488 - THE1C LTR MaLR -39 336 1 269 272 36 38 chr2 128256248 128256702 -124999881 - L1P LINE L1 -737 5417 4967 257 263 26 0 chr2 128257030 128257106 -124999477 - L1M4 LINE L1 -1548 5660 5583 202 0 59 29 chr2 128257119 128257153 -124999430 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1922 110 0 60 chr2 128257156 128257456 -124999127 - AluSx SINE Alu -30 282 1 1672 205 15 40 chr2 128257651 128257777 -124998806 + L1 LINE L1 3277 3405 -2741 2175 87 0 0 chr2 128257777 128258065 -124998518 - AluY SINE Alu -23 288 1 1672 205 15 40 chr2 128258065 128258392 -124998191 + L1 LINE L1 3405 3719 -2427 1971 31 0 0 chr2 128258507 128258736 -124997847 + L1PA4 LINE L1 5616 5844 -311 437 286 132 37 chr2 128258738 128259104 -124997479 - L1MEc LINE L1 -904 1997 1727 349 253 134 45 chr2 128259121 128259323 -124997260 - L1MEc LINE L1 -5062 1478 1259 33 25 0 0 chr2 128260240 128260280 -124996303 + AT_rich Low_complexity Low_complexity 1 40 0 2612 45 0 0 chr2 128260645 128260955 -124995628 + AluY SINE Alu 1 310 -1 2994 240 16 7 chr2 128261588 128262341 -124994242 - L1M4 LINE L1 -3161 4047 3288 913 244 32 59 chr2 128262378 128263034 -124993549 - L1M4 LINE L1 -3903 3305 2677 667 225 58 23 chr2 128263066 128263299 -124993284 - L1M4 LINE L1 -4443 2766 2533 257 200 0 0 chr2 128263277 128263332 -124993251 - L1M4 LINE L1 -888 6320 6266 * 315 0 0 0 chr2 128263422 128263457 -124993126 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 492 425 30 3 chr2 128263581 128263910 -124992673 - L1M4 LINE L1 -5319 1890 1553 * 976 299 36 25 chr2 128263906 128264306 -124992277 - L1M4 LINE L1 -6128 1081 289 1242 252 42 36 chr2 128264345 128264706 -124991877 + MLT1A2 LTR MaLR 9 371 -3 440 207 148 0 chr2 128264712 128264847 -124991736 + L1M LINE L1 5254 5408 -766 249 196 0 0 chr2 128264852 128264908 -124991675 + CT-rich Low_complexity Low_complexity 1 56 0 618 224 4 16 chr2 128264921 128265175 -124991408 + CT-rich Low_complexity Low_complexity 1 251 0 234 0 0 0 chr2 128265190 128265216 -124991367 + (T)n Simple_repeat Simple_repeat 1 26 0 2112 109 7 0 chr2 128265955 128266249 -124990334 - AluSx SINE Alu -16 296 1 282 222 48 87 chr2 128266268 128266394 -124990189 - HAL1b LINE L1 -415 933 813 349 350 88 49 chr2 128266684 128267216 -124989367 - HAL1b LINE L1 -778 570 18 228 284 53 11 chr2 128267519 128267614 -124988969 - MLT1J1 LTR MaLR -3 443 345 970 260 318 16 chr2 128268474 128269085 -124987498 + LTR50 LTR ERVL 1 795 0 711 369 52 27 chr2 128269705 128270775 -124985808 + ERVL LTR ERVL 757 1809 -3845 348 304 7 58 chr2 128270973 128271111 -124985472 + ERVL LTR ERVL 2083 2213 -3551 565 291 60 19 chr2 128271582 128271850 -124984733 - LTR41 LTR ERVL -494 279 1 251 245 82 41 chr2 128271860 128271958 -124984625 - MLT1J LTR MaLR -324 187 86 4366 58 35 35 chr2 128272119 128272728 -124983855 - L1PA8 LINE L1 -7 6165 5557 24 32 0 0 chr2 128273240 128273271 -124983312 + AT_rich Low_complexity Low_complexity 1 31 0 30 69 0 0 chr2 128273622 128273680 -124982903 + AT_rich Low_complexity Low_complexity 1 58 0 22 0 0 0 chr2 128274124 128274146 -124982437 + AT_rich Low_complexity Low_complexity 1 22 0 247 222 16 32 chr2 128274583 128274646 -124981937 - MLT1F LTR MaLR -217 325 264 * 814 300 41 14 chr2 128274625 128274915 -124981668 - MLT1H LTR MaLR -229 320 23 1635 182 26 23 chr2 128274991 128275293 -124981290 + AluJb SINE Alu 1 303 -9 232 264 7 114 chr2 128275393 128275533 -124981050 - MLT1H-int LTR MaLR -171 1200 1076 309 300 11 0 chr2 128276319 128276409 -124980174 - MLT1H-int LTR MaLR -1276 95 5 339 286 171 23 chr2 128276423 128276640 -124979943 - MLT1H LTR MaLR -21 534 286 390 318 50 25 chr2 128276668 128276869 -124979714 - MLT1H LTR MaLR -237 312 107 874 151 0 36 chr2 128276975 128277141 -124979442 + AluSp/q SINE Alu 154 313 0 335 299 167 41 chr2 128277281 128277502 -124979081 + MIR SINE MIR 3 251 -11 282 222 0 0 chr2 128278130 128278193 -124978390 + MER46C DNA MER2_type 1 63 -275 26 30 0 0 chr2 128278468 128278501 -124978082 + AT_rich Low_complexity Low_complexity 1 33 0 425 302 50 37 chr2 128279447 128279745 -124976838 - HAL1b LINE L1 -758 590 289 413 266 42 0 chr2 128279795 128279938 -124976645 - MER103 DNA DNA -7 159 11 1925 155 18 36 chr2 128280670 128281057 -124975526 - L1PB4 LINE L1 -1 6155 5776 325 272 0 22 chr2 128281063 128281155 -124975428 - L1MC4 LINE L1 -1339 6703 6614 9767 190 25 21 chr2 128281181 128283957 -124972626 - L1PB4 LINE L1 -391 5765 2981 2023 149 56 65 chr2 128284597 128285027 -124971556 + MSTA LTR MaLR 3 428 0 251 222 37 9 chr2 128286873 128286981 -124969602 + (TA)n Simple_repeat Simple_repeat 1 111 0 380 297 130 11 chr2 128287463 128287648 -124968935 - MIR SINE MIR -7 255 49 22 0 0 0 chr2 128288056 128288078 -124968505 + AT_rich Low_complexity Low_complexity 1 22 0 1053 296 92 37 chr2 128289780 128290354 -124966229 + L2 LINE L2 2371 2976 -338 3507 213 72 8 chr2 128290391 128291258 -124965325 - L1MB4 LINE L1 0 6180 5259 1245 150 22 31 chr2 128291258 128291485 -124965098 - MER30 DNA MER1_type 0 230 6 5498 253 29 49 chr2 128291505 128293718 -124962865 - L1MB4 LINE L1 -896 5250 3081 234 0 0 0 chr2 128294363 128294389 -124962194 + (TA)n Simple_repeat Simple_repeat 2 27 0 5865 199 16 0 chr2 128294397 128295425 -124961158 + L1PA15-16 LINE L1 1 1044 -5805 3546 139 51 91 chr2 128295525 128296847 -124959736 - pTR5 LTR ERV1 -87 1683 5 413 73 0 0 chr2 128296847 128296902 -124959681 + Alu SINE Alu 238 292 -20 4329 118 19 7 chr2 128296905 128297582 -124959001 + L1PA14 LINE L1 5476 6160 -1 24 32 0 0 chr2 128297647 128297678 -124958905 + AT_rich Low_complexity Low_complexity 1 31 0 288 319 98 83 chr2 128297879 128298227 -124958356 - L2 LINE L2 -16 3297 2945 330 247 101 0 chr2 128298457 128298546 -124958037 - L2 LINE L2 -947 2367 2270 797 155 112 0 chr2 128298865 128299052 -124957531 - L1MB3 LINE L1 -8 6175 5968 * 4197 266 46 38 chr2 128299042 128301016 -124955567 - L1M4 LINE L1 -1922 4722 2732 907 134 0 0 chr2 128301016 128301150 -124955433 + AluJo SINE Alu 1 134 -178 4156 225 104 18 chr2 128301154 128302696 -124953887 - L1M4 LINE L1 -3900 2746 1071 292 329 15 7 chr2 128302775 128302912 -124953671 - L1M4 LINE L1 -5708 938 801 318 299 36 7 chr2 128303292 128303429 -124953154 - L1M4 LINE L1 -6397 145 5 384 103 0 0 chr2 128303490 128303548 -124953035 + (TG)n Simple_repeat Simple_repeat 2 59 0 1797 106 24 106 chr2 128303787 128304118 -124952465 + AluYb8 SINE Alu 1 304 -14 382 308 54 15 chr2 128304364 128304494 -124952089 - L2 LINE L2 0 3313 3179 369 398 84 8 chr2 128304518 128304807 -124951776 - L2 LINE L2 -254 3059 2756 2078 100 28 3 chr2 128304980 128305270 -124951313 + AluY SINE Alu 1 297 -14 441 0 0 0 chr2 128305311 128305360 -124951223 + (TG)n Simple_repeat Simple_repeat 2 50 0 1957 187 38 34 chr2 128305376 128305927 -124950656 - MLT2A2 LTR ERVL 0 554 1 4834 213 19 47 chr2 128307451 128308758 -124947825 + L1MA4A LINE L1 3212 4481 -1665 225 0 0 0 chr2 128308761 128308786 -124947797 + (TC)n Simple_repeat Simple_repeat 2 26 0 207 0 0 0 chr2 128308785 128308808 -124947775 + (TA)n Simple_repeat Simple_repeat 2 24 0 * 12125 203 19 20 chr2 128308995 128312075 -124944508 + L1PA16 LINE L1 714 3676 -3173 8303 221 7 18 chr2 128312118 128315062 -124941521 + L1PA16 LINE L1 3934 6869 0 5042 188 47 48 chr2 128315066 128315949 -124940634 + L1MA4A LINE L1 4483 5366 -937 2103 128 7 3 chr2 128315949 128316255 -124940328 + AluSg SINE Alu 1 307 -3 5042 188 47 48 chr2 128316255 128316565 -124940018 + L1MA4A LINE L1 5366 5675 -628 195 42 0 0 chr2 128316565 128316589 -124939994 + (GGAAA)n Simple_repeat Simple_repeat 2 25 0 5042 188 47 48 chr2 128316589 128317212 -124939371 + L1MA4A LINE L1 5675 6303 0 25 0 0 68 chr2 128317610 128317654 -124938929 + AT_rich Low_complexity Low_complexity 1 41 0 2159 112 0 0 chr2 128317665 128317951 -124938632 + AluSx SINE Alu 1 286 -26 312 27 0 0 chr2 128317954 128317991 -124938592 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 515 288 85 42 chr2 128318095 128318331 -124938252 + L2 LINE L2 3036 3281 -32 314 219 0 10 chr2 128318369 128318465 -124938118 + GA-rich Low_complexity Low_complexity 3 97 0 2195 87 7 7 chr2 128318544 128318843 -124937740 - AluY SINE Alu -12 299 1 445 284 0 0 chr2 128319433 128319542 -124937041 + MIR SINE MIR 81 189 -73 360 301 103 14 chr2 128319552 128319698 -124936885 + MIR SINE MIR 38 196 -66 234 0 0 0 chr2 128319802 128319828 -124936755 + (CA)n Simple_repeat Simple_repeat 2 27 0 4049 233 111 25 chr2 128320764 128321102 -124935481 + L1MC/D LINE L1 918 1225 -5157 3431 119 14 4 chr2 128321102 128321608 -124934975 + MER9 LTR ERVK 1 511 0 4049 233 111 25 chr2 128321608 128322680 -124933903 + L1MC/D LINE L1 1225 2461 -3921 1893 148 0 3 chr2 128322680 128322964 -124933619 + AluSc SINE Alu 27 309 0 4049 233 111 25 chr2 128322964 128323043 -124933540 + L1MC/D LINE L1 2461 2532 -3850 1795 206 144 8 chr2 128323143 128323657 -124932926 - L1M4c LINE L1 -4768 1616 1033 1155 266 195 34 chr2 128323660 128324251 -124932332 - L1M4c LINE L1 -5611 773 88 278 339 71 16 chr2 128324330 128324513 -124932070 + L2 LINE L2 2990 3182 -131 33860 82 11 9 chr2 128324519 128330625 -124925958 - L1PA6 LINE L1 -1 6153 11 362 330 120 27 chr2 128331133 128331609 -124924974 + L1MC/D LINE L1 4346 4865 -1517 4706 58 29 1 chr2 128331731 128332727 -124923856 - MER11A LTR ERVK -5 1261 1 358 304 116 40 chr2 128332728 128333132 -124923451 + L1MC/D LINE L1 5008 5442 -940 3320 135 13 0 chr2 128333132 128333606 -124922977 + L1PA12 LINE L1 1 480 -7101 297 174 0 0 chr2 128333617 128333663 -124922920 + L1PA12 LINE L1 1959 2004 -5577 * 20543 183 40 22 chr2 128333661 128334672 -124921911 + L1PA13 LINE L1 339 1330 -5484 197 33 33 0 chr2 128334672 128334702 -124921881 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 20543 183 40 22 chr2 128334702 128339892 -124916691 + L1PA13 LINE L1 1330 6795 -19 433 342 92 24 chr2 128339957 128340252 -124916331 + L1MC/D LINE L1 5491 5805 -597 239 287 130 9 chr2 128340270 128340385 -124916198 + L1MC/D LINE L1 5850 5978 -2066 1399 119 0 92 chr2 128341043 128341294 -124915289 + AluSg SINE Alu 1 228 -82 191 340 68 10 chr2 128342326 128342429 -124914154 - MIR3 SINE MIR -95 113 5 22 0 0 0 chr2 128342853 128342875 -124913708 + AT_rich Low_complexity Low_complexity 1 22 0 4492 173 29 29 chr2 128343691 128344311 -124912272 - MER4D LTR ERV1 0 903 281 1928 164 51 20 chr2 128344311 128344664 -124911919 - THE1B LTR MaLR 0 364 1 4492 173 29 29 chr2 128344664 128344946 -124911637 - MER4D LTR ERV1 -621 282 1 683 256 67 34 chr2 128346029 128346614 -124909969 + LTR48 LTR ERV1 5 542 0 384 345 35 0 chr2 128346866 128346982 -124909601 - L2 LINE L2 -9 3304 3185 837 294 38 23 chr2 128347000 128347347 -124909236 + L1MCb LINE L1 17 368 -5677 4296 189 23 39 chr2 128347366 128348361 -124908222 + L1MC3 LINE L1 6785 7763 -22 545 284 41 0 chr2 128348370 128348567 -124908016 + L1MCb LINE L1 1876 2080 -4484 10474 189 15 14 chr2 128349276 128351580 -124905003 + L1P4 LINE L1 3186 5491 -670 1681 114 13 0 chr2 128351580 128351817 -124904766 + AluY SINE Alu 1 240 -71 475 252 68 21 chr2 128351936 128352170 -124904413 + L1MCb LINE L1 2825 3069 -3495 * 1357 227 29 31 chr2 128352159 128352612 -124903971 + L1MCb LINE L1 4333 4784 -1780 2404 221 30 6 chr2 128352617 128353109 -124903474 + L1PA10 LINE L1 5 508 -5367 24361 160 13 14 chr2 128353126 128358892 -124897691 + L1PA10 LINE L1 738 6483 0 3879 213 43 40 chr2 128358892 128360717 -124895866 + L1MB3 LINE L1 4775 6599 -2 679 228 74 56 chr2 128360790 128361290 -124895293 - LTR48B LTR ERV1 0 644 1 2338 101 0 3 chr2 128362734 128363042 -124893541 + AluSg SINE Alu 1 307 -3 501 337 8 47 chr2 128363170 128363365 -124893218 + MIR SINE MIR 14 198 -64 411 21 0 0 chr2 128363365 128363413 -124893170 + (TA)n Simple_repeat Simple_repeat 2 49 0 501 337 8 47 chr2 128363413 128363472 -124893111 + MIR SINE MIR 198 258 -4 760 191 44 0 chr2 128363678 128363814 -124892769 - MER7A DNA MER2_type 0 336 195 2723 158 27 0 chr2 128363814 128364263 -124892320 - LTR26B LTR ERV1 0 531 71 366 118 0 0 chr2 128364363 128364414 -124892169 - LTR26B LTR ERV1 -480 51 1 * 1123 146 18 59 chr2 128364414 128364633 -124891950 - MER7A DNA MER2_type -138 208 1 292 345 9 10 chr2 128364914 128365038 -124891545 - MIR SINE MIR -68 140 32 187 379 35 35 chr2 128365879 128365995 -124890588 - L2 LINE L2 -17 3255 3140 528 96 0 0 chr2 128366629 128366702 -124889881 - 7SK RNA RNA 0 193 121 629 153 0 46 chr2 128366738 128366869 -124889714 - 7SK RNA RNA -68 125 1 2031 134 13 19 chr2 128367005 128367319 -124889264 - AluSx SINE Alu 0 312 1 394 240 124 8 chr2 128367732 128367853 -124888730 + MIR SINE MIR 62 196 -66 1602 263 28 16 chr2 128368234 128368667 -124887916 + MER74A LTR ERVL 121 558 0 252 200 17 17 chr2 128369025 128369085 -124887498 - L2 LINE L2 -219 3053 2994 396 0 0 0 chr2 128369187 128369231 -124887352 + (TAA)n Simple_repeat Simple_repeat 2 45 0 21 36 0 0 chr2 128369295 128369323 -124887260 + AT_rich Low_complexity Low_complexity 1 28 0 308 366 0 24 chr2 128369912 128370035 -124886548 - MIR SINE MIR -62 146 27 207 0 0 0 chr2 128370444 128370467 -124886116 + (TTG)n Simple_repeat Simple_repeat 2 24 0 218 306 0 0 chr2 128371008 128371057 -124885526 + L2 LINE L2 3136 3184 -88 297 315 154 0 chr2 128372081 128372211 -124884372 + MIR SINE MIR 101 250 -12 639 302 144 56 chr2 128372247 128372455 -124884128 - L2 LINE L2 0 3313 3125 2509 122 0 0 chr2 128372455 128372816 -124883767 + THE1B LTR MaLR 1 361 -3 639 302 144 56 chr2 128372816 128373212 -124883371 - L2 LINE L2 -188 3125 2765 1225 102 0 11 chr2 128373212 128373388 -124883195 - L1PA6 LINE L1 -6 6148 5975 639 302 144 56 chr2 128373388 128373650 -124882933 - L2 LINE L2 -548 2765 2381 277 355 0 9 chr2 128374025 128374132 -124882451 + MER5A DNA MER1_type 83 188 -1 23 33 0 0 chr2 128374677 128374707 -124881876 + AT_rich Low_complexity Low_complexity 1 30 0 321 303 16 0 chr2 128375137 128375259 -124881324 - MER103 DNA DNA -42 124 1 200 315 0 0 chr2 128375479 128375533 -124881050 - L2 LINE L2 -31 3282 3229 223 245 0 0 chr2 128376528 128376577 -124880006 + (CA)n Simple_repeat Simple_repeat 1 49 0 27 29 0 0 chr2 128377277 128377311 -124879272 + AT_rich Low_complexity Low_complexity 1 34 0 187 297 16 62 chr2 128379787 128379851 -124876732 + L2 LINE L2 3245 3305 -8 291 28 0 0 chr2 128379852 128379888 -124876695 + (CA)n Simple_repeat Simple_repeat 2 37 0 409 285 48 32 chr2 128380152 128380338 -124876245 + MER5A DNA MER1_type 1 189 0 464 261 72 86 chr2 128380834 128381125 -124875458 - L1M4 LINE L1 -3614 2532 2246 208 175 35 53 chr2 128381248 128381305 -124875278 + A-rich Low_complexity Low_complexity 6 61 0 231 278 37 74 chr2 128382018 128382288 -124874295 + HAL1b LINE L1 663 922 -426 365 291 123 26 chr2 128382316 128382618 -124873965 + HAL1b LINE L1 988 1318 -30 6778 158 30 11 chr2 128382688 128385057 -124871526 - L1MA2 LINE L1 0 7723 5307 1408 187 0 44 chr2 128385057 128385330 -124871253 - AluJb SINE Alu -14 298 38 16665 196 61 21 chr2 128385330 128387068 -124869515 - L1MA2 LINE L1 -2251 5314 3646 5937 147 23 30 chr2 128387068 128388146 -124868437 + MER11C LTR ERVK 1 1071 0 16665 196 61 21 chr2 128388146 128391498 -124865085 - L1MA2 LINE L1 -3919 3646 12 321 242 0 23 chr2 128391509 128391641 -124864942 + CT-rich Low_complexity Low_complexity 3 131 0 265 252 19 19 chr2 128391656 128391815 -124864768 + CT-rich Low_complexity Low_complexity 1 159 0 21 0 0 0 chr2 128392305 128392326 -124864257 + AT_rich Low_complexity Low_complexity 1 21 0 354 343 111 0 chr2 128393248 128393429 -124863154 + MIR SINE MIR 50 250 -12 505 358 48 10 chr2 128393989 128394196 -124862387 - MIR SINE MIR -29 233 19 8758 197 46 20 chr2 128394781 128394992 -124861591 - L1MA4 LINE L1 -5 7714 7510 1101 220 133 8 chr2 128394992 128395256 -124861327 - AluJo SINE Alu -5 297 1 8758 197 46 20 chr2 128395256 128398715 -124857868 - L1MA4 LINE L1 -209 7510 3146 2135 112 0 23 chr2 128398715 128399019 -124857564 - AluSg SINE Alu -13 297 1 8758 197 46 20 chr2 128399019 128399405 -124857178 - L1MA4 LINE L1 -4573 3146 2772 458 341 62 78 chr2 128400854 128401391 -124855192 - L1ME3A LINE L1 -223 5947 5420 1679 279 42 5 chr2 128401612 128402189 -124854394 - MER20B DNA MER1_type 0 783 186 189 107 0 0 chr2 128402375 128402403 -124854180 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 738 192 0 0 chr2 128402403 128402523 -124854060 - FLAM_A SINE Alu -13 120 1 248 329 138 26 chr2 128402715 128402746 -124853837 + MIR SINE MIR 3 29 -233 4921 45 2 2 chr2 128402746 128403348 -124853235 - L1PA4 LINE L1 -2 6153 5552 248 329 138 26 chr2 128403348 128403547 -124853036 + MIR SINE MIR 29 255 -7 318 26 0 0 chr2 128403969 128404008 -124852575 + (TG)n Simple_repeat Simple_repeat 2 40 0 678 328 16 11 chr2 128405295 128405478 -124851105 + MER5A DNA MER1_type 2 185 -4 567 242 174 0 chr2 128405935 128406096 -124850487 + MER5A DNA MER1_type 1 189 0 264 261 106 70 chr2 128406895 128407037 -124849546 + MIR SINE MIR 70 216 -46 482 329 30 33 chr2 128407426 128407638 -124848945 - MIR SINE MIR -36 226 19 198 261 0 0 chr2 128408137 128408183 -124848400 - L2 LINE L2 0 3313 3268 517 203 68 11 chr2 128408401 128408578 -124848005 + MER53 DNA DNA 3 189 0 180 0 0 0 chr2 128408639 128408659 -124847924 + (A)n Simple_repeat Simple_repeat 1 20 0 311 322 17 68 chr2 128408895 128409072 -124847511 - MIR SINE MIR -46 216 49 216 320 13 13 chr2 128409619 128409694 -124846889 + MIR3 SINE MIR 111 185 -23 2164 100 7 17 chr2 128409710 128410009 -124846574 + AluSp SINE Alu 3 298 -15 382 294 28 0 chr2 128410383 128410492 -124846091 + MIR SINE MIR 86 197 -65 378 94 0 0 chr2 128410917 128410981 -124845602 + (CA)n Simple_repeat Simple_repeat 2 65 0 207 313 75 22 chr2 128411343 128411477 -124845106 + L2 LINE L2 2833 2973 -299 211 211 303 0 chr2 128411673 128411749 -124844834 + L2 LINE L2 3214 3312 -1 415 308 0 0 chr2 128412035 128412152 -124844431 + MIR SINE MIR 132 248 -14 214 345 18 65 chr2 128412875 128413043 -124843540 - L2 LINE L2 -181 3091 2932 776 268 29 5 chr2 128413419 128413624 -124842959 - MER58 DNA MER1_type -130 211 2 312 278 21 10 chr2 128413639 128413736 -124842847 + MIR SINE MIR 5 102 -160 941 169 5 36 chr2 128413815 128413973 -124842610 + AluJb SINE Alu 124 276 -36 281 26 0 26 chr2 128413973 128414012 -124842571 + (CAAAA)n Simple_repeat Simple_repeat 4 41 0 941 169 5 36 chr2 128414012 128414048 -124842535 + AluJb SINE Alu 276 312 0 270 0 0 0 chr2 128414412 128414442 -124842141 + (T)n Simple_repeat Simple_repeat 1 30 0 251 308 90 15 chr2 128414797 128414930 -124841653 + MIR SINE MIR 72 214 -48 270 56 0 0 chr2 128415020 128415056 -124841527 + (TG)n Simple_repeat Simple_repeat 1 36 0 213 121 0 0 chr2 128415270 128415303 -124841280 + (TC)n Simple_repeat Simple_repeat 2 34 0 219 88 0 0 chr2 128415303 128415337 -124841246 + (CA)n Simple_repeat Simple_repeat 1 34 0 582 191 0 0 chr2 128415790 128415905 -124840678 - L1MA5 LINE L1 -8 6292 6178 740 180 104 71 chr2 128416024 128416207 -124840376 - MER20B DNA MER1_type -28 191 3 531 297 65 11 chr2 128416372 128416557 -124840026 + MIR SINE MIR 64 258 -4 197 353 103 34 chr2 128416763 128417055 -124839528 + L2 LINE L2 2924 3235 -78 361 278 34 34 chr2 128417283 128417459 -124839124 - LTR16C LTR ERVL -123 368 193 371 198 3 177 chr2 128417965 128418196 -124838387 - L1ME LINE L1 -626 5538 5346 441 145 0 0 chr2 128418206 128418282 -124838301 + (TTCC)n Simple_repeat Simple_repeat 4 79 0 253 71 0 71 chr2 128418287 128418329 -124838254 - MLT2B3 LTR ERVL -9 545 507 2211 169 30 49 chr2 128418329 128418795 -124837788 - MSTB2 LTR MaLR 0 457 1 185 132 26 0 chr2 128418797 128418835 -124837748 + (TAGA)n Simple_repeat Simple_repeat 2 40 0 399 339 50 6 chr2 128418870 128419050 -124837533 + L2 LINE L2 2778 2965 -349 186 75 0 75 chr2 128419101 128419154 -124837429 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 888 144 11 6 chr2 128419163 128419337 -124837246 + GA-rich Low_complexity Low_complexity 4 178 0 183 184 0 0 chr2 128419343 128419381 -124837202 + (TA)n Simple_repeat Simple_repeat 2 39 0 205 209 139 101 chr2 128419904 128420033 -124836550 + MIR SINE MIR 119 252 -10 1896 179 21 66 chr2 128420255 128420652 -124835931 - MSTB LTR MaLR 0 426 60 8157 196 20 20 chr2 128420652 128422236 -124834347 - MSTB-int LTR MaLR -66 1585 1 2114 181 29 36 chr2 128422236 128422650 -124833933 - MSTB LTR MaLR -2 424 14 367 340 27 7 chr2 128423070 128423217 -124833366 - MIR SINE MIR -79 183 34 278 271 24 0 chr2 128423376 128423461 -124833122 - MER103 DNA DNA -7 159 73 229 258 4 0 chr2 128424287 128424355 -124832228 + MIR SINE MIR 75 145 -63 22 0 0 0 chr2 128425056 128425078 -124831505 + AT_rich Low_complexity Low_complexity 1 22 0 204 333 35 0 chr2 128425319 128425376 -124831207 - L2 LINE L2 -1 3271 3213 308 235 0 0 chr2 128425980 128426031 -124830552 - MER91A DNA MER1_type -53 143 93 238 391 37 26 chr2 128426382 128426571 -124830012 - L2 LINE L2 -412 2902 2712 638 220 0 15 chr2 128426874 128427006 -124829577 - AluJo SINE Alu -178 134 5 1970 124 4 0 chr2 128427040 128427314 -124829269 - AluSq SINE Alu -19 294 20 10139 229 30 30 chr2 128427353 128428361 -124828222 - L1PB4 LINE L1 0 6859 5852 255 31 0 0 chr2 128428361 128428393 -124828190 + (TTG)n Simple_repeat Simple_repeat 2 33 0 10139 229 30 30 chr2 128428393 128429080 -124827503 - L1PB4 LINE L1 -1007 5852 5166 1133 29 7 0 chr2 128429080 128429218 -124827365 - L1PA3 LINE L1 -1 6154 6016 10139 229 30 30 chr2 128429218 128432239 -124824344 - L1PB4 LINE L1 -1693 5166 2348 2212 131 0 0 chr2 128432239 128432551 -124824032 - AluSx SINE Alu 0 312 1 10139 229 30 30 chr2 128432551 128433632 -124822951 - L1PB4 LINE L1 -4511 2348 1268 473 209 5 107 chr2 128433635 128433831 -124822752 - L1PBb LINE L1 -5329 875 700 204 135 0 0 chr2 128433867 128433904 -124822679 + (CA)n Simple_repeat Simple_repeat 2 38 0 930 162 5 37 chr2 128434098 128434289 -124822294 - L1 LINE L1 -1496 4650 4466 248 203 95 0 chr2 128434287 128434361 -124822222 + L1MA7 LINE L1 6210 6290 -1 * 2165 102 3 7 chr2 128434738 128435031 -124821552 - AluY SINE Alu -19 292 1 1746 152 22 2 chr2 128435031 128435503 -124821080 - L1P4 LINE L1 -670 5491 5010 190 368 51 17 chr2 128435503 128435620 -124820963 - MIR SINE MIR -123 139 19 230 255 0 0 chr2 128435686 128435733 -124820850 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 3523 167 35 6 chr2 128435737 128436395 -124820188 + Tigger2 DNA MER2_type 2 678 -2040 884 208 19 43 chr2 128436395 128436602 -124819981 + Tigger2 DNA MER2_type 2517 2718 0 1432 218 28 32 chr2 128436614 128437028 -124819555 + L1MB7 LINE L1 5754 6165 -19 704 226 199 36 chr2 128437101 128437407 -124819176 + L1MC4 LINE L1 7687 8042 0 21 57 0 0 chr2 128437782 128437817 -124818766 + AT_rich Low_complexity Low_complexity 1 35 0 241 224 164 0 chr2 128438352 128438419 -124818164 - MIR SINE MIR -1 261 184 589 326 22 13 chr2 128438562 128438786 -124817797 + L1MDa LINE L1 105 330 -6210 1603 252 53 49 chr2 128439565 128441005 -124815578 + L1MDa LINE L1 1990 3436 -3104 * 15887 162 29 72 chr2 128441000 128444386 -124812197 + L1MA1 LINE L1 12 3252 -4313 510 183 0 0 chr2 128444392 128444474 -124812109 + AluJ/FLAM SINE Alu 3 84 -228 14510 175 23 8 chr2 128444504 128445677 -124810906 + L1MA1 LINE L1 3238 4393 -3328 1595 145 102 44 chr2 128445677 128446021 -124810562 - THE1B LTR MaLR 0 364 1 14510 175 23 8 chr2 128446021 128448231 -124808352 + L1MA1 LINE L1 4393 6702 -1019 2760 13 3 0 chr2 128448231 128448537 -124808046 + AluYa5 SINE Alu 1 307 -4 14510 175 23 8 chr2 128448537 128449572 -124807011 + L1MA1 LINE L1 6702 7721 0 660 278 72 18 chr2 128449579 128450022 -124806561 + L1MDa LINE L1 3422 3888 -2652 1656 75 18 0 chr2 128450031 128450315 -124806268 - L1P4 LINE L1 -680 5481 5194 285 42 0 0 chr2 128450310 128450356 -124806227 + L1PA14 LINE L1 6120 6165 0 * 1770 221 48 58 chr2 128450384 128451000 -124805583 + L1MDa LINE L1 3917 4557 -1983 451 235 53 53 chr2 128451139 128451309 -124805274 + L1MDa LINE L1 4518 4687 -1853 941 181 0 80 chr2 128451494 128451634 -124804949 + L1MD1 LINE L1 6016 6133 -109 1834 174 40 11 chr2 128451634 128452013 -124804570 - MLT1B LTR MaLR 0 390 1 941 181 0 80 chr2 128452013 128452098 -124804485 + L1MD1 LINE L1 6133 6223 -19 1223 244 21 48 chr2 128452321 128452711 -124803872 + MLT2D LTR ERVL 1 480 -40 200 250 18 0 chr2 128452727 128452783 -124803800 + (TA)n Simple_repeat Simple_repeat 1 57 0 252 167 0 0 chr2 128452783 128452831 -124803752 + MLT2D LTR ERVL 473 520 0 187 282 90 26 chr2 128453174 128453252 -124803331 + L2 LINE L2 3150 3232 -40 244 152 0 0 chr2 128453312 128453358 -124803225 + LTR66 LTR ERVL 394 439 -171 318 260 0 62 chr2 128453501 128453597 -124802986 - L1MC4 LINE L1 -1339 6703 6614 191 250 0 16 chr2 128453601 128453665 -124802918 + (TA)n Simple_repeat Simple_repeat 1 63 0 307 322 0 0 chr2 128453666 128453756 -124802827 - L1MC4 LINE L1 -1339 6703 6614 * 322 214 21 11 chr2 128453678 128453772 -124802811 + L1MC4 LINE L1 1995 6983 -1339 444 241 0 0 chr2 128453773 128453889 -124802694 + (TATATG)n Simple_repeat Simple_repeat 5 120 0 33 43 0 0 chr2 128456574 128456621 -124799962 + AT_rich Low_complexity Low_complexity 1 47 0 4889 180 20 19 chr2 128456621 128457975 -124798608 - L1MA7 LINE L1 -44 6247 4896 559 270 200 11 chr2 128458266 128458706 -124797877 + LTR50 LTR ERVL 1 586 -209 1228 217 28 6 chr2 128459103 128459430 -124797153 + L1MB7 LINE L1 4280 4613 -1533 4128 191 21 22 chr2 128459500 128461015 -124795568 + L1P5 LINE L1 4266 5784 -370 3506 234 55 11 chr2 128461010 128462382 -124794201 + L1MB7 LINE L1 4750 6184 0 * 316 340 20 7 chr2 128463658 128463808 -124792775 - MIR SINE MIR -105 157 6 769 264 144 11 chr2 128463810 128464170 -124792413 - MLT1I LTR MaLR -1 408 1 330 67 0 0 chr2 128464298 128464343 -124792240 + (TTCC)n Simple_repeat Simple_repeat 4 48 0 1747 131 42 42 chr2 128464773 128465079 -124791504 - AluSg SINE Alu -4 306 1 192 77 0 0 chr2 128465426 128465452 -124791131 + (TTTTTA)n Simple_repeat Simple_repeat 2 27 0 356 227 113 35 chr2 128465992 128466034 -124790549 + MER112 DNA MER1_type 103 140 -120 2017 87 66 21 chr2 128466034 128466322 -124790261 - AluY SINE Alu -10 301 1 356 227 113 35 chr2 128466322 128466420 -124790163 + MER112 DNA MER1_type 140 254 -6 241 218 168 0 chr2 128467705 128467806 -124788777 - MER5C DNA MER1_type -200 124 7 455 179 23 46 chr2 128468214 128468387 -124788196 + GA-rich Low_complexity Low_complexity 2 170 0 229 244 0 0 chr2 128468391 128468432 -124788151 + polypurine Low_complexity Low_complexity 4 44 0 2051 185 49 31 chr2 128469130 128469583 -124787000 - LOR1b LTR ERV1 0 461 1 226 310 54 131 chr2 128469590 128470019 -124786564 + L2 LINE L2 2872 3267 -5 409 242 0 11 chr2 128470100 128470191 -124786392 - MIR SINE MIR -130 132 43 1183 173 33 0 chr2 128470902 128471116 -124785467 + AluJb SINE Alu 86 306 -6 331 349 99 14 chr2 128472196 128472408 -124784175 - MIR SINE MIR -1 261 32 21 0 0 0 chr2 128472446 128472467 -124784116 + AT_rich Low_complexity Low_complexity 1 21 0 196 135 19 19 chr2 128472828 128472880 -124783703 + GA-rich Low_complexity Low_complexity 2 53 0 1851 94 102 15 chr2 128472998 128473263 -124783320 + AluY SINE Alu 1 288 -23 2017 201 175 43 chr2 128473437 128473950 -124782633 + LTR69 LTR ERVL 1 581 -7 451 344 76 11 chr2 128474072 128474348 -124782235 - L3 LINE CR1 -5 1572 1279 2122 159 35 32 chr2 128474471 128475021 -124781562 - MLT2A2 LTR ERVL 0 554 1 1495 302 33 17 chr2 128476000 128476715 -124779868 - L2 LINE L2 -119 3194 2471 279 305 42 11 chr2 128476837 128476932 -124779651 - MIR3 SINE MIR -1 207 110 2170 133 51 20 chr2 128477147 128477500 -124779083 + THE1B LTR MaLR 1 364 0 5176 122 25 8 chr2 128477500 128478785 -124777798 + THE1B-int LTR MaLR 1 1580 0 2287 116 48 20 chr2 128478785 128479139 -124777444 + THE1B LTR MaLR 1 364 0 360 258 38 86 chr2 128479150 128479336 -124777247 - L1ME3A LINE L1 -322 5848 5672 201 219 31 0 chr2 128479711 128479775 -124776808 + (TAA)n Simple_repeat Simple_repeat 2 67 0 547 276 138 5 chr2 128479790 128480000 -124776583 + MIR SINE MIR 3 240 -22 815 215 25 6 chr2 128481408 128481571 -124775012 + FRAM SINE Alu 1 166 0 2027 53 3 39 chr2 128481940 128482224 -124774359 - AluY SINE Alu -2 309 36 1978 280 63 36 chr2 128482234 128483683 -124772900 + L1ME1 LINE L1 1013 2501 -4039 1033 253 30 27 chr2 128483706 128484002 -124772581 + LTR40a LTR ERVL 205 501 -18 4664 265 68 33 chr2 128484012 128484599 -124771984 + L1ME1 LINE L1 2719 3284 -3276 1178 196 0 17 chr2 128484599 128484839 -124771744 - MER46A DNA MER2_type 0 236 1 4664 265 68 33 chr2 128484839 128487840 -124768743 + L1ME1 LINE L1 3284 6509 -51 485 304 71 0 chr2 128488262 128488446 -124768137 + MIR SINE MIR 62 258 -4 1276 149 136 145 chr2 128488447 128488956 -124767627 + MLT1D LTR MaLR 2 505 0 402 325 61 22 chr2 128489091 128489322 -124767261 + MIR SINE MIR 9 248 -14 1217 88 0 0 chr2 128489392 128489551 -124767032 + L1PA8A LINE L1 5946 6104 -27 23 0 0 0 chr2 128490079 128490102 -124766481 + AT_rich Low_complexity Low_complexity 1 23 0 531 213 132 51 chr2 128490206 128490403 -124766180 - Tigger1 DNA MER2_type 0 2418 2206 6273 141 2 26 chr2 128490422 128491504 -124765079 + L1P LINE L1 1921 2976 -3170 6904 159 23 12 chr2 128491979 128493180 -124763403 + Tigger1 DNA MER2_type 2 1216 -1202 568 222 17 0 chr2 128493182 128493299 -124763284 + Tigger1 DNA MER2_type 2103 2221 -197 207 0 0 0 chr2 128493301 128493324 -124763259 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 230 398 51 0 chr2 128493483 128493581 -124763002 + L2 LINE L2 3116 3218 -54 879 161 0 0 chr2 128493602 128493757 -124762826 - L1MA4 LINE L1 -2 6298 6144 2671 100 9 38 chr2 128493854 128494273 -124762310 - L1PB1 LINE L1 -3 6148 5742 700 194 150 0 chr2 128494311 128494491 -124762092 + Tigger1 DNA MER2_type 2211 2417 -1 1372 186 88 42 chr2 128494622 128494976 -124761607 + MLT1A2 LTR MaLR 1 461 -6 182 233 0 0 chr2 128495011 128495054 -124761529 + L2 LINE L2 2935 2977 -336 537 218 34 77 chr2 128495067 128495299 -124761284 - Charlie5 DNA MER1_type -134 2478 2 314 350 45 77 chr2 128495500 128495811 -124760772 + L2 LINE L2 2972 3272 0 324 364 23 23 chr2 128496279 128496411 -124760172 + MIR SINE MIR 17 148 -114 3038 108 16 2 chr2 128496929 128497357 -124759226 - MER57B LTR ERV1 0 434 1 492 48 0 0 chr2 128498310 128498373 -124758210 + (CA)n Simple_repeat Simple_repeat 2 64 0 26 0 0 0 chr2 128498520 128498546 -124758037 + AT_rich Low_complexity Low_complexity 1 26 0 187 295 42 21 chr2 128498574 128498669 -124757914 + L2 LINE L2 3208 3304 -9 299 297 97 58 chr2 128498957 128499123 -124757460 - MIR SINE MIR -62 146 3 223 316 75 53 chr2 128500026 128500159 -124756424 + MIR SINE MIR 16 151 -57 281 278 33 11 chr2 128500159 128500249 -124756334 + MER5B DNA MER1_type 7 98 -80 22 0 0 0 chr2 128501028 128501050 -124755533 + AT_rich Low_complexity Low_complexity 1 22 0 1719 180 3 17 chr2 128501479 128501773 -124754810 + AluJo SINE Alu 1 290 -22 589 339 25 4 chr2 128501851 128502093 -124754490 + MIR SINE MIR 9 255 -7 291 419 16 0 chr2 128502577 128502706 -124753877 - L2 LINE L2 -10 3262 3132 280 342 31 6 chr2 128502950 128503111 -124753472 - L2 LINE L2 -479 2835 2671 25 0 0 0 chr2 128503287 128503312 -124753271 + AT_rich Low_complexity Low_complexity 1 25 0 465 335 111 55 chr2 128503343 128503946 -124752637 - L2 LINE L2 -963 2351 1715 23 33 0 0 chr2 128506368 128506398 -124750185 + AT_rich Low_complexity Low_complexity 1 30 0 261 340 173 0 chr2 128506423 128506585 -124749998 - MIR SINE MIR -12 250 61 2232 97 3 7 chr2 128506587 128506887 -124749696 - AluSg SINE Alu -11 299 1 23 0 0 0 chr2 128507867 128507890 -124748693 + AT_rich Low_complexity Low_complexity 1 23 0 316 258 17 33 chr2 128508184 128508304 -124748279 - L1ME LINE L1 -452 5669 5552 277 308 79 41 chr2 128508385 128508613 -124747970 - MIR SINE MIR -16 246 11 231 242 30 15 chr2 128508807 128508873 -124747710 - MIR3 SINE MIR -23 185 119 228 156 0 0 chr2 128510102 128510147 -124746436 - L1MA7 LINE L1 -16 6275 6231 1622 176 3 26 chr2 128513050 128513362 -124743221 - AluJo SINE Alu -7 305 1 200 302 81 0 chr2 128514083 128514169 -124742414 + L2 LINE L2 2994 3086 -186 2357 95 0 0 chr2 128514460 128514765 -124741818 + AluY SINE Alu 1 305 -6 387 117 0 0 chr2 128514783 128514843 -124741740 + L1MC4 LINE L1 7979 8038 -4 24 0 0 0 chr2 128515163 128515187 -124741396 + AT_rich Low_complexity Low_complexity 1 24 0 321 213 33 0 chr2 128515280 128515341 -124741242 - MER58 DNA MER1_type 0 2420 2358 577 99 14 155 chr2 128515345 128515487 -124741096 - AluSg/x SINE Alu -3 306 185 776 271 28 39 chr2 128515491 128515775 -124740808 - MER58 DNA MER1_type -2138 282 2 202 111 0 28 chr2 128516774 128516810 -124739773 + (CA)n Simple_repeat Simple_repeat 2 36 0 297 385 29 19 chr2 128516879 128517087 -124739496 + MIR SINE MIR 32 241 -21 21 0 0 0 chr2 128517703 128517724 -124738859 + AT_rich Low_complexity Low_complexity 1 21 0 279 350 35 7 chr2 128517983 128518126 -124738457 - MIR SINE MIR -56 206 60 191 274 73 73 chr2 128518952 128519076 -124737507 + MIR SINE MIR 69 146 -62 643 305 67 32 chr2 128520144 128520558 -124736025 + L1MC4a LINE L1 5494 5880 -290 22 70 0 0 chr2 128522423 128522466 -124734117 + GC_rich Low_complexity Low_complexity 1 43 0 263 246 0 0 chr2 128524372 128524429 -124732154 + CT-rich Low_complexity Low_complexity 3 59 0 217 51 51 0 chr2 128525505 128525544 -124731039 + (TG)n Simple_repeat Simple_repeat 1 41 0 227 174 0 65 chr2 128525939 128525985 -124730598 + MIR SINE MIR 32 74 -134 194 171 24 0 chr2 128527252 128527293 -124729290 + MIR SINE MIR 65 106 -156 214 351 21 11 chr2 128527580 128527674 -124728909 - MIR SINE MIR -119 143 49 186 43 0 0 chr2 128528353 128528376 -124728207 + (CA)n Simple_repeat Simple_repeat 2 24 0 226 289 175 41 chr2 128529250 128529444 -124727139 - L2 LINE L2 -61 3252 3033 373 329 133 12 chr2 128529483 128529732 -124726851 - L2 LINE L2 -433 2881 2603 254 29 29 0 chr2 128532209 128532244 -124724339 + (TCCCC)n Simple_repeat Simple_repeat 3 38 0 323 321 0 22 chr2 128532545 128532679 -124723904 + CT-rich Low_complexity Low_complexity 2 132 0 2878 10 0 0 chr2 128533128 128533442 -124723141 - AluYb8 SINE Alu -4 314 1 373 342 39 7 chr2 128533971 128534126 -124722457 - MIR SINE MIR -85 177 18 2518 167 8 6 chr2 128534592 128535060 -124721523 + L1MA7 LINE L1 5684 6155 -136 367 163 12 0 chr2 128535060 128535139 -124721444 + L1MA8 LINE L1 6202 6288 -3 390 143 0 0 chr2 128537802 128537879 -124718704 + (TG)n Simple_repeat Simple_repeat 2 78 0 716 211 35 92 chr2 128538807 128539034 -124717549 + MER20 DNA MER1_type 2 215 -4 24 0 0 29 chr2 128539081 128539097 -124717486 + AT_rich Low_complexity Low_complexity 1 16 -18 1935 141 3 0 chr2 128539097 128539381 -124717202 - AluSx SINE Alu -27 285 1 24 0 0 29 chr2 128539381 128539399 -124717184 + AT_rich Low_complexity Low_complexity 16 34 0 487 0 32 0 chr2 128539998 128540061 -124716522 + (TCTA)n Simple_repeat Simple_repeat 4 68 0 738 308 62 68 chr2 128540359 128540891 -124715692 - L3 LINE CR1 0 1577 1049 374 332 82 14 chr2 128541398 128541606 -124714977 - MIR SINE MIR -24 238 17 193 306 0 16 chr2 128541693 128541755 -124714828 - L2 LINE L2 -4 3309 3249 387 0 0 0 chr2 128542114 128542157 -124714426 + (CA)n Simple_repeat Simple_repeat 2 44 0 1894 129 7 11 chr2 128542509 128542789 -124713794 - AluSx SINE Alu 0 312 34 396 305 179 11 chr2 128544339 128544529 -124712054 - MIR SINE MIR -8 254 33 302 229 34 93 chr2 128544567 128544685 -124711898 - MIR SINE MIR -62 146 36 247 268 0 0 chr2 128545162 128545218 -124711365 + (CA)n Simple_repeat Simple_repeat 1 56 0 330 298 201 0 chr2 128546788 128546934 -124709649 + MIR SINE MIR 29 198 -61 1735 194 11 27 chr2 128546951 128547318 -124709265 - MLT1A1 LTR MaLR -4 361 1 1887 161 3 6 chr2 128547409 128547720 -124708863 + AluJb SINE Alu 1 310 -2 259 320 133 0 chr2 128548919 128549047 -124707536 + MIR SINE MIR 110 254 -8 948 237 65 45 chr2 128549111 128549419 -124707164 - MER5C DNA MER1_type -7 317 4 335 317 52 65 chr2 128549968 128550258 -124706325 + L2 LINE L2 2804 3089 -183 327 291 82 66 chr2 128550713 128550909 -124705674 + MIR SINE MIR 32 230 -32 216 226 140 65 chr2 128552239 128552332 -124704251 + MIR SINE MIR 107 206 -56 237 301 28 56 chr2 128553493 128553572 -124703011 + MIR SINE MIR 70 146 -116 2051 80 0 70 chr2 128553572 128553910 -124702673 + AluY SINE Alu 1 317 0 237 301 28 56 chr2 128553910 128553972 -124702611 + MIR SINE MIR 146 208 -54 192 353 7 29 chr2 128554020 128554159 -124702424 + L2 LINE L2 1959 2094 -1220 2240 86 0 23 chr2 128554511 128554815 -124701768 - AluY SINE Alu -14 297 1 249 97 32 118 chr2 128554961 128555054 -124701529 + L1MA2 LINE L1 5973 6057 -247 822 119 26 53 chr2 128555054 128555205 -124701378 + L1MA3 LINE L1 6155 6301 -4 34 24 0 0 chr2 128555206 128555247 -124701336 + AT_rich Low_complexity Low_complexity 1 41 0 186 304 43 14 chr2 128555312 128555381 -124701202 - MER5A DNA MER1_type -2 187 117 216 401 78 35 chr2 128559534 128559853 -124696730 + L2 LINE L2 2925 3257 -15 261 383 28 14 chr2 128560470 128560611 -124695972 + MIR3 SINE MIR 25 167 -41 216 265 59 59 chr2 128560832 128560934 -124695649 - L2 LINE L2 -1 3312 3211 360 315 60 30 chr2 128561600 128561800 -124694783 + L2 LINE L2 2470 2675 -639 249 303 119 97 chr2 128561913 128562316 -124694267 + L2 LINE L2 2825 3236 -36 25 65 0 0 chr2 128563873 128563919 -124692664 + AT_rich Low_complexity Low_complexity 1 46 0 1319 235 93 35 chr2 128564406 128564857 -124691726 - MLT1D LTR MaLR -2 503 27 4472 196 22 18 chr2 128565239 128566982 -124689601 + L1MA2 LINE L1 18 1870 -5695 * 13094 166 27 20 chr2 128566966 128571722 -124684861 + L1MA2 LINE L1 2940 7723 0 248 128 0 21 chr2 128572014 128572061 -124684522 + (CAT)n Simple_repeat Simple_repeat 3 48 0 4535 200 24 12 chr2 128572195 128573222 -124683361 - Tigger6a DNA MER2_type -42 1041 2 198 374 17 9 chr2 128573225 128573340 -124683243 - MIR SINE MIR -93 169 54 260 273 39 97 chr2 128574137 128574291 -124682292 + MIR SINE MIR 62 206 -56 220 278 0 19 chr2 128575678 128575732 -124680851 + MIR SINE MIR 42 94 -168 347 271 57 28 chr2 128575951 128576128 -124680455 - LTR16C LTR ERVL -24 467 286 406 327 0 0 chr2 128576422 128576532 -124680051 - MIR SINE MIR -133 129 20 336 239 58 104 chr2 128576772 128577031 -124679552 - MER112 DNA MER1_type -13 247 1 416 314 208 14 chr2 128577038 128577245 -124679338 + MIR SINE MIR 16 262 0 456 345 78 0 chr2 128578519 128578710 -124677873 - L3 LINE CR1 -280 1297 1092 3579 190 72 42 chr2 128578979 128579292 -124677291 - L1MD1 LINE L1 -2 6634 6332 2598 62 0 0 chr2 128579292 128579598 -124676985 + AluY SINE Alu 1 306 -5 3579 190 72 42 chr2 128579598 128580293 -124676290 - L1MD1 LINE L1 -304 6332 5451 1872 126 7 41 chr2 128580293 128580609 -124675974 + AluSg SINE Alu 1 306 0 3579 190 72 42 chr2 128580609 128580986 -124675597 - L1MD1 LINE L1 -1185 5451 5087 896 221 52 86 chr2 128581020 128581496 -124675087 - L1MD1 LINE L1 -1438 5102 4643 1706 172 7 14 chr2 128581498 128581795 -124674788 - AluJb SINE Alu -17 295 1 202 278 9 9 chr2 128581822 128581937 -124674646 + (TA)n Simple_repeat Simple_repeat 2 116 0 760 264 84 45 chr2 128582005 128582151 -124674432 - L1MD1 LINE L1 -2527 4013 3874 2481 81 0 3 chr2 128582151 128582459 -124674124 - AluSg SINE Alu -3 307 1 760 264 84 45 chr2 128582459 128582908 -124673675 - L1MD1 LINE L1 -2666 3874 3377 5266 237 74 23 chr2 128583015 128583945 -124672638 - L1MD1 LINE L1 -3696 2844 1964 2178 113 0 3 chr2 128583945 128584238 -124672345 + AluSc SINE Alu 1 292 -17 5266 237 74 23 chr2 128584238 128585784 -124670799 - L1MD1 LINE L1 -4576 1964 3 432 282 100 18 chr2 128585826 128585996 -124670587 - MIR SINE MIR -43 219 36 221 318 68 38 chr2 128587280 128587412 -124669171 - MIR SINE MIR -106 156 21 206 364 68 0 chr2 128588661 128588749 -124667834 - MIR SINE MIR -112 150 57 648 230 115 5 chr2 128588802 128588993 -124667590 - MER58C DNA MER1_type 0 215 4 322 288 25 68 chr2 128588998 128589161 -124667422 - MIR3 SINE MIR -51 157 2 587 276 86 4 chr2 128589664 128589896 -124666687 + MIR SINE MIR 12 262 0 220 352 89 13 chr2 128590749 128590908 -124665675 + MIR SINE MIR 5 177 -63 312 70 0 0 chr2 128591496 128591539 -124665044 - L1PA8 LINE L1 -465 5689 5647 3692 70 10 0 chr2 128591539 128592024 -124664559 + L1PA8 LINE L1 5678 6168 -4 562 286 84 31 chr2 128592311 128592538 -124664045 - MIR SINE MIR -6 256 18 2019 137 3 3 chr2 128593212 128593511 -124663072 - AluSx SINE Alu -13 299 1 426 365 54 10 chr2 128593626 128593829 -124662754 - MIR SINE MIR -50 212 1 2119 170 13 53 chr2 128594175 128594253 -124662330 - Tigger2a DNA MER2_type -2274 434 354 2497 57 0 16 chr2 128594253 128594569 -124662014 + AluY SINE Alu 1 311 0 2119 170 13 53 chr2 128594569 128594942 -124661641 - Tigger2a DNA MER2_type -2354 354 1 663 256 91 31 chr2 128594982 128595226 -124661357 - MIR SINE MIR -1 261 12 198 0 0 0 chr2 128595235 128595257 -124661326 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 211 327 103 74 chr2 128595609 128595976 -124660607 + L2 LINE L2 2857 3234 -38 2149 175 38 14 chr2 128596086 128596504 -124660079 - MSTA LTR MaLR 0 428 1 1898 168 111 5 chr2 128596505 128596892 -124659691 - MSTA LTR MaLR 0 428 1 2046 164 3 0 chr2 128597091 128597396 -124659187 + AluSx SINE Alu 1 306 -6 271 285 98 41 chr2 128597762 128597885 -124658698 - MIR SINE MIR -115 147 18 345 219 7 136 chr2 128598893 128599048 -124657535 + MIR3 SINE MIR 10 144 -64 572 242 13 26 chr2 128599243 128599396 -124657187 + MIR SINE MIR 112 262 0 238 204 56 0 chr2 128599476 128599530 -124657053 + Tigger3(Golem) DNA MER2_type 1 57 -2972 1331 156 41 0 chr2 128599632 128599875 -124656708 + Tigger3(Golem) DNA MER2_type 2776 3028 -1 184 156 56 0 chr2 128599936 128600026 -124656557 + (TA)n Simple_repeat Simple_repeat 1 95 0 21 71 0 0 chr2 128600034 128600076 -124656507 + AT_rich Low_complexity Low_complexity 1 42 0 230 127 56 0 chr2 128600091 128600162 -124656421 + (TA)n Simple_repeat Simple_repeat 1 75 0 227 315 31 71 chr2 128600162 128600289 -124656294 + L2 LINE L2 1708 1829 -1485 303 237 72 10 chr2 128600349 128600446 -124656137 - L1MC5 LINE L1 -151 7810 7708 202 321 0 0 chr2 128600643 128600696 -124655887 + L2 LINE L2 1890 1942 -1372 1177 273 34 10 chr2 128601155 128601572 -124655011 - L1MC4a LINE L1 -1871 5937 5511 326 286 91 65 chr2 128601818 128602094 -124654489 - L1MC4a LINE L1 -3274 2872 2590 248 181 53 53 chr2 128602196 128602290 -124654293 - MLT2E LTR ERVL -63 565 472 2638 259 39 10 chr2 128602306 128603081 -124653502 + MER21B LTR ERV1 13 809 -54 1016 293 116 7 chr2 128603103 128603516 -124653067 - MLT2E LTR ERVL -161 467 10 3100 130 4 14 chr2 128603787 128604296 -124652287 - MER4A LTR ERV1 0 664 161 1463 318 98 10 chr2 128605329 128606002 -124650581 + MER45C DNA AcHobo 221 952 -1 21 0 0 0 chr2 128606577 128606598 -124649985 + AT_rich Low_complexity Low_complexity 1 21 0 444 298 111 5 chr2 128606648 128606846 -124649737 - MIR SINE MIR -14 248 30 293 207 230 15 chr2 128606891 128607026 -124649557 - MIR SINE MIR -13 249 86 21 36 0 0 chr2 128608633 128608661 -124647922 + AT_rich Low_complexity Low_complexity 1 28 0 429 264 145 45 chr2 128608999 128609336 -124647247 + L1ME LINE L1 5401 5771 -391 315 0 0 0 chr2 128609591 128609626 -124646957 + (TG)n Simple_repeat Simple_repeat 2 36 0 1339 279 88 49 chr2 128609631 128611070 -124645513 - L1M4 LINE L1 -860 5286 3792 230 232 73 0 chr2 128611236 128611318 -124645265 - L1ME3A LINE L1 -2 6168 6081 1294 176 156 0 chr2 128611735 128611881 -124644702 - AluJb SINE Alu -10 302 180 315 0 0 0 chr2 128611881 128611916 -124644667 + (TG)n Simple_repeat Simple_repeat 2 36 0 1294 176 156 0 chr2 128611916 128612025 -124644558 - AluJb SINE Alu -132 180 7 200 250 0 0 chr2 128612070 128612110 -124644473 + MIR SINE MIR 217 256 -6 461 302 132 25 chr2 128613298 128613533 -124643050 + L2 LINE L2 3041 3300 -13 289 254 0 16 chr2 128613868 128613931 -124642652 - MER5A DNA MER1_type -33 156 95 812 151 0 16 chr2 128613939 128614065 -124642518 + AluJo SINE Alu 50 173 -139 204 235 272 25 chr2 128614947 128615028 -124641555 - MIR SINE MIR -160 102 2 407 295 65 107 chr2 128615092 128615523 -124641060 + L2 LINE L2 2879 3291 -22 663 207 0 0 chr2 128615713 128615834 -124640749 + FLAM_C SINE Alu 1 121 -12 668 186 84 18 chr2 128616010 128616177 -124640406 - MER5B DNA MER1_type 0 178 1 384 103 0 0 chr2 128617222 128617280 -124639303 + (CA)n Simple_repeat Simple_repeat 1 58 0 186 316 101 22 chr2 128618785 128618852 -124637731 - MIR SINE MIR -93 169 109 276 53 0 0 chr2 128618852 128618890 -124637693 + (CA)n Simple_repeat Simple_repeat 2 39 0 186 316 101 22 chr2 128618890 128618961 -124637622 - MIR SINE MIR -153 109 20 22 35 0 0 chr2 128618979 128619008 -124637575 + AT_rich Low_complexity Low_complexity 1 29 0 38551 71 6 3 chr2 128619041 128625163 -124631420 + L1PA5 LINE L1 11 6154 0 195 242 133 67 chr2 128625493 128625613 -124630970 + MIR SINE MIR 79 206 -56 404 262 131 7 chr2 128627456 128627601 -124628982 - MIR SINE MIR -71 191 29 207 280 0 0 chr2 128628754 128628804 -124627779 - MIR SINE MIR -3 259 210 207 209 0 0 chr2 128629067 128629110 -124627473 + (TAA)n Simple_repeat Simple_repeat 1 43 0 237 333 108 8 chr2 128630950 128631079 -124625504 + MIR SINE MIR 48 189 -73 1722 186 6 25 chr2 128632440 128632801 -124623782 - MER47A DNA MER2_type -12 354 1 254 302 68 98 chr2 128633055 128633260 -124623323 + L2 LINE L2 3033 3231 -41 279 0 0 0 chr2 128635354 128635385 -124621198 + (CA)n Simple_repeat Simple_repeat 2 32 0 40947 34 23 2 chr2 128635866 128641383 -124615200 + L1P1 LINE L1 1 5638 -517 4619 50 0 0 chr2 128641486 128642060 -124614523 + L1PA2 LINE L1 5582 6155 0 318 87 0 0 chr2 128642065 128642111 -124614472 + (A)n Simple_repeat Simple_repeat 1 46 0 415 298 61 27 chr2 128642675 128642937 -124613646 + L1ME4a LINE L1 5615 5885 -236 180 273 239 11 chr2 128643127 128643215 -124613368 - L2 LINE L2 -20 3252 3145 617 236 88 64 chr2 128643494 128643791 -124612792 - MER46C DNA MER2_type -27 311 8 21 57 0 0 chr2 128644375 128644410 -124612173 + AT_rich Low_complexity Low_complexity 1 35 0 763 106 0 0 chr2 128644473 128644586 -124611997 + AluY SINE Alu 197 309 -2 203 289 22 33 chr2 128644649 128644739 -124611844 + L2 LINE L2 3195 3283 -30 367 43 71 0 chr2 128644763 128644833 -124611750 + (TA)n Simple_repeat Simple_repeat 1 75 0 248 279 13 45 chr2 128644906 128645060 -124611523 + (TATATG)n Simple_repeat Simple_repeat 2 150 0 * 340 323 8 8 chr2 128644995 128645128 -124611455 + (TA)n Simple_repeat Simple_repeat 2 134 0 229 151 38 0 chr2 128645129 128645182 -124611401 - L1MC4 LINE L1 -1339 6703 6649 198 0 0 0 chr2 128645647 128645669 -124610914 + (A)n Simple_repeat Simple_repeat 1 22 0 1461 179 29 118 chr2 128646703 128647111 -124609472 - MLT1A2 LTR MaLR -2 372 1 186 385 33 11 chr2 128647191 128647282 -124609301 - L2 LINE L2 -2 3270 3178 320 312 110 0 chr2 128647673 128647782 -124608801 + MIR SINE MIR 17 137 -125 577 318 59 0 chr2 128648515 128648715 -124607868 - MIR SINE MIR -5 257 43 22 0 0 0 chr2 128649512 128649534 -124607049 + AT_rich Low_complexity Low_complexity 1 22 0 196 265 15 44 chr2 128649541 128649609 -124606974 + MIR SINE MIR 6 71 -191 1545 195 19 55 chr2 128649633 128649846 -124606737 - MLT1A1 LTR MaLR 0 365 171 2218 113 0 10 chr2 128649846 128650155 -124606428 - AluSx SINE Alu -6 306 1 1545 195 19 55 chr2 128650155 128650320 -124606263 - MLT1A1 LTR MaLR -194 171 1 333 271 139 51 chr2 128650497 128650892 -124605691 - LTR16C LTR ERVL -3 488 59 675 276 12 0 chr2 128651027 128651197 -124605386 + MER5B DNA MER1_type 1 172 -6 825 311 8 64 chr2 128651205 128651565 -124605018 - L3 LINE CR1 -60 1517 1178 212 86 29 0 chr2 128651684 128651719 -124604864 + (TG)n Simple_repeat Simple_repeat 2 37 0 2012 123 24 0 chr2 128652738 128653031 -124603552 - AluSx SINE Alu -12 300 1 633 270 74 27 chr2 128653048 128653281 -124603302 + MIR SINE MIR 20 260 -2 503 306 47 10 chr2 128654253 128654446 -124602137 + MLT1L LTR MaLR 401 600 -15 1079 214 69 36 chr2 128654519 128654851 -124601732 + MER2 DNA MER2_type 1 343 -1 1330 172 14 9 chr2 128655528 128655749 -124600834 - MER58A DNA MER1_type -2 222 1 482 260 20 55 chr2 128655784 128655930 -124600653 + MIR3 SINE MIR 59 199 -9 687 240 176 40 chr2 128656252 128656564 -124600019 - MLT2B1 LTR ERVL 0 452 165 252 240 91 58 chr2 128657445 128657566 -124599017 - MIR SINE MIR -66 142 18 368 262 208 12 chr2 128658297 128658465 -124598118 + MIR SINE MIR 54 254 -8 478 311 62 10 chr2 128658518 128658711 -124597872 - MIR SINE MIR -15 247 45 230 294 10 59 chr2 128659327 128659429 -124597154 - MIR3 SINE MIR -6 202 106 243 286 159 16 chr2 128660378 128660504 -124596079 - L2 LINE L2 -3 3310 3167 384 352 115 23 chr2 128660750 128661116 -124595467 - L2 LINE L2 -270 3043 2640 318 313 87 41 chr2 128661425 128661620 -124594963 + MIR SINE MIR 15 218 -44 384 273 107 27 chr2 128661627 128661777 -124594806 + MIR SINE MIR 68 229 -33 214 250 73 0 chr2 128664260 128664328 -124592255 + MIR SINE MIR 120 192 -70 21 57 0 0 chr2 128666477 128666512 -124590071 + AT_rich Low_complexity Low_complexity 1 35 0 29 47 0 0 chr2 128668478 128668521 -124588062 + AT_rich Low_complexity Low_complexity 1 43 0 1573 192 10 13 chr2 128668649 128668956 -124587627 - AluJo SINE Alu -5 307 2 195 69 0 0 chr2 128668996 128669025 -124587558 + (TC)n Simple_repeat Simple_repeat 1 29 0 276 100 0 0 chr2 128669025 128669065 -124587518 + (TG)n Simple_repeat Simple_repeat 1 40 0 12732 152 40 9 chr2 128669098 128671436 -124585147 + Tigger1 DNA MER2_type 8 2418 0 300 223 124 25 chr2 128671468 128671589 -124584994 - L1ME4a LINE L1 -171 5950 5818 22 0 0 0 chr2 128671590 128671612 -124584971 + AT_rich Low_complexity Low_complexity 1 22 0 3251 130 28 24 chr2 128671679 128672224 -124584359 - L1PA16 LINE L1 -1 6165 5619 2798 138 94 72 chr2 128672680 128673087 -124583496 - MER39B LTR ERV1 0 653 225 1713 172 3 14 chr2 128673087 128673384 -124583199 - AluSq SINE Alu -11 302 9 2798 138 94 72 chr2 128673384 128673615 -124582968 - MER39B LTR ERV1 -428 225 1 212 98 24 24 chr2 128674047 128674088 -124582495 + (TTTG)n Simple_repeat Simple_repeat 4 44 0 2322 101 3 0 chr2 128674095 128674391 -124582192 - AluSq SINE Alu -16 297 1 461 17 17 0 chr2 128675144 128675202 -124581381 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 296 98 0 0 chr2 128675215 128675256 -124581327 - Alu SINE Alu -20 282 242 2165 110 0 17 chr2 128675405 128675704 -124580879 - AluSx SINE Alu -18 294 1 21 89 0 0 chr2 128677395 128677451 -124579132 + AT_rich Low_complexity Low_complexity 1 56 0 21 36 0 0 chr2 128677700 128677728 -124578855 + AT_rich Low_complexity Low_complexity 1 28 0 236 348 38 15 chr2 128677851 128678026 -124578557 + MIR SINE MIR 26 202 -60 377 262 41 8 chr2 128678593 128678715 -124577868 - MIR SINE MIR -56 206 81 192 345 0 17 chr2 128679391 128679449 -124577134 + L2 LINE L2 3234 3290 -23 218 313 68 97 chr2 128679962 128680106 -124576477 - L2 LINE L2 0 3272 3125 500 107 13 0 chr2 128680106 128680181 -124576402 - MADE1 DNA Mariner -4 76 1 218 313 68 97 chr2 128680181 128680387 -124576196 - L2 LINE L2 -147 3125 2932 518 207 103 29 chr2 128680626 128680800 -124575783 - MER53 DNA DNA -1 188 2 253 339 64 28 chr2 128681558 128681667 -124574916 + L2 LINE L2 3146 3258 -14 234 304 209 25 chr2 128682265 128682423 -124574160 + MER5A DNA MER1_type 1 187 -2 * 551 208 174 7 chr2 128682295 128682439 -124574144 - MER5A DNA MER1_type -21 168 1 232 374 11 11 chr2 128683541 128683632 -124572951 - MIR SINE MIR -139 123 33 258 307 0 0 chr2 128684668 128684682 -124571901 + GA-rich Low_complexity Low_complexity 2 15 -74 2424 57 10 3 chr2 128684682 128684983 -124571600 + AluY SINE Alu 1 303 -8 258 307 0 0 chr2 128684983 128685056 -124571527 + GA-rich Low_complexity Low_complexity 14 89 0 500 273 63 7 chr2 128685383 128685526 -124571057 - L2 LINE L2 -15 3298 3148 193 256 163 0 chr2 128686179 128686265 -124570318 + MIR SINE MIR 65 164 -98 22 0 0 0 chr2 128687724 128687746 -124568837 + AT_rich Low_complexity Low_complexity 1 22 0 2092 98 57 7 chr2 128687878 128688175 -124568408 + AluSx SINE Alu 1 312 0 215 243 28 125 chr2 128688955 128689099 -124567484 + L2 LINE L2 3009 3138 -175 1003 173 82 119 chr2 128689106 128689568 -124567015 - MLT1C LTR MaLR -13 429 2 441 229 12 78 chr2 128689568 128689734 -124566849 + L2 LINE L2 3151 3305 -8 339 44 0 0 chr2 128690609 128690654 -124565929 + (TA)n Simple_repeat Simple_repeat 1 45 0 233 201 43 58 chr2 128690898 128691037 -124565546 + (TATAA)n Simple_repeat Simple_repeat 1 137 0 470 266 23 46 chr2 128691648 128691821 -124564762 - MER58A DNA MER1_type -55 169 1 233 319 188 12 chr2 128692477 128692637 -124563946 + MIR SINE MIR 3 190 -72 986 301 59 63 chr2 128693552 128693931 -124562652 - L1ME3 LINE L1 -211 5951 5572 2450 63 13 0 chr2 128693931 128694233 -124562350 + AluY SINE Alu 1 306 -5 986 301 59 63 chr2 128694233 128694640 -124561943 - L1ME3 LINE L1 -590 5572 5165 1351 139 9 0 chr2 128694640 128694863 -124561720 - L1PA16 LINE L1 0 6166 5942 986 301 59 63 chr2 128694863 128695642 -124560941 - L1ME3 LINE L1 -997 5165 4389 2354 99 3 0 chr2 128695642 128695946 -124560637 - AluSp SINE Alu -8 305 1 986 301 59 63 chr2 128695946 128696499 -124560084 - L1ME3 LINE L1 -1773 4389 3835 739 169 16 38 chr2 128696738 128696921 -124559662 - L1MB1 LINE L1 -10 6179 6001 2244 162 3 3 chr2 128698777 128699141 -124557442 - THE1B LTR MaLR 0 364 1 10058 120 15 30 chr2 128699141 128700746 -124555837 - THE1B-int LTR MaLR 0 1580 1 2070 136 61 6 chr2 128700746 128701091 -124555492 - THE1B LTR MaLR 0 364 1 2116 153 18 32 chr2 128701328 128701636 -124554947 + THE1C LTR MaLR 1 305 -70 2049 119 51 0 chr2 128701636 128701931 -124554652 - AluSg SINE Alu 0 310 1 2116 153 18 32 chr2 128701931 128702002 -124554581 + THE1C LTR MaLR 305 375 0 321 250 70 25 chr2 128702390 128702522 -124554061 + MIR SINE MIR 50 185 -75 200 233 0 0 chr2 128702879 128702922 -124553661 + MER5A DNA MER1_type 16 58 -131 203 349 62 51 chr2 128705104 128705299 -124551284 - MIR SINE MIR -5 257 61 24 0 0 0 chr2 128707080 128707104 -124549479 + AT_rich Low_complexity Low_complexity 1 24 0 575 260 105 17 chr2 128707536 128707717 -124548866 - MIR SINE MIR -30 232 36 264 30 0 0 chr2 128707741 128707774 -124548809 + (CA)n Simple_repeat Simple_repeat 2 34 0 2470 71 0 0 chr2 128709059 128709367 -124547216 - AluY SINE Alu -3 308 1 22 35 0 0 chr2 128711542 128711571 -124545012 + AT_rich Low_complexity Low_complexity 1 29 0 210 273 0 0 chr2 128711819 128711874 -124544709 + T-rich Low_complexity Low_complexity 1 55 0 186 167 0 0 chr2 128711932 128711968 -124544615 + A-rich Low_complexity Low_complexity 4 39 0 436 345 12 29 chr2 128712159 128712330 -124544253 + MIR3 SINE MIR 38 205 -3 5428 30 0 5 chr2 128712611 128713252 -124543331 - L1PA4 LINE L1 0 6155 5518 956 70 78 0 chr2 128714381 128714510 -124542073 + MER85 DNA T2_type 1 139 0 188 389 66 6 chr2 128715076 128715243 -124541340 + L2 LINE L2 3096 3272 0 24 77 0 0 chr2 128715934 128715986 -124540597 + AT_rich Low_complexity Low_complexity 1 52 0 273 250 0 0 chr2 128716642 128716698 -124539885 - L2 LINE L2 -3 3269 3214 935 225 87 22 chr2 128716775 128717117 -124539466 - MSTD LTR MaLR 0 396 1 288 287 122 61 chr2 128717172 128717353 -124539230 + L3 LINE CR1 572 763 -814 548 341 35 4 chr2 128717623 128717849 -124538734 + MIR SINE MIR 28 260 -2 29 90 0 0 chr2 128718354 128718432 -124538151 + AT_rich Low_complexity Low_complexity 1 78 0 243 298 43 29 chr2 128718861 128719069 -124537514 - L1M4 LINE L1 -2272 3874 3664 304 328 135 26 chr2 128719247 128719439 -124537144 - MIR SINE MIR -27 235 23 353 272 27 5 chr2 128719482 128719618 -124536965 + MIR SINE MIR 6 143 -65 455 261 37 96 chr2 128720235 128720423 -124536160 - MER5B DNA MER1_type 0 178 2 255 319 65 14 chr2 128720450 128720588 -124535995 - L2 LINE L2 -6 3307 3163 185 169 28 28 chr2 128720688 128720759 -124535824 + (TA)n Simple_repeat Simple_repeat 2 72 0 290 292 0 22 chr2 128720802 128720939 -124535644 + (TA)n Simple_repeat Simple_repeat 2 135 0 309 297 32 39 chr2 128721018 128721173 -124535410 + L1MC4a LINE L1 6529 6682 -1126 290 275 130 7 chr2 128721398 128721536 -124535047 - MIR SINE MIR 0 262 108 4941 166 31 7 chr2 128721708 128722876 -124533707 - L1MA9 LINE L1 -13 6299 5103 2330 149 11 47 chr2 128722876 128723320 -124533263 - MSTC LTR MaLR 0 428 1 4941 166 31 7 chr2 128723320 128723337 -124533246 - L1MA9 LINE L1 -1209 5103 5088 597 165 4 145 chr2 128723766 128723856 -124532727 - LTR37B LTR ERV1 0 468 367 375 23 0 0 chr2 128723856 128723900 -124532683 + (TG)n Simple_repeat Simple_repeat 2 45 0 597 165 4 145 chr2 128723900 128724057 -124532526 - LTR37B LTR ERV1 -101 367 256 394 88 0 0 chr2 128724060 128724117 -124532466 - MLT2B3 LTR ERVL 0 520 464 318 167 0 0 chr2 128724117 128724177 -124532406 + (CA)n Simple_repeat Simple_repeat 1 60 0 2556 211 22 4 chr2 128724190 128724682 -124531901 - MLT2B3 LTR ERVL -53 501 1 656 274 39 28 chr2 128724682 128724936 -124531647 - LTR37B LTR ERV1 -211 257 1 24 0 0 0 chr2 128726730 128726754 -124529829 + AT_rich Low_complexity Low_complexity 1 24 0 2213 125 0 0 chr2 128726754 128727049 -124529534 - AluSx SINE Alu -17 295 1 281 234 16 0 chr2 128727265 128727329 -124529254 + MER5A DNA MER1_type 42 106 -83 423 246 49 16 chr2 128727553 128727675 -124528908 - MIR SINE MIR -103 159 34 732 241 46 17 chr2 128729488 128729662 -124526921 + MER5A DNA MER1_type 10 188 -1 258 226 0 0 chr2 128729728 128729790 -124526793 - MLT1L LTR MaLR -393 222 161 378 149 35 0 chr2 128729849 128729936 -124526647 + CT-rich Low_complexity Low_complexity 1 90 0 27 0 0 0 chr2 128730001 128730028 -124526555 + AT_rich Low_complexity Low_complexity 1 27 0 539 208 152 11 chr2 128730540 128730718 -124525865 + MER3 DNA MER1_type 1 203 -6 750 307 73 17 chr2 128731181 128731591 -124524992 - LTR16A1 LTR ERVL -17 440 8 395 246 114 26 chr2 128731667 128731930 -124524653 + LTR16C LTR ERVL 177 491 0 387 0 0 0 chr2 128732156 128732199 -124524384 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 2056 116 0 0 chr2 128732201 128732469 -124524114 - AluSx SINE Alu -32 280 13 2111 116 7 7 chr2 128733060 128733378 -124523205 + AluSq SINE Alu 1 318 0 207 313 24 12 chr2 128733707 128733790 -124522793 + MIR SINE MIR 20 103 -159 188 297 40 14 chr2 128733846 128733920 -124522663 - MIR3 SINE MIR -131 77 2 213 233 0 17 chr2 128734696 128734756 -124521827 + T-rich Low_complexity Low_complexity 2 60 0 232 304 43 33 chr2 128735557 128735649 -124520934 + MIR SINE MIR 86 178 -84 378 273 168 69 chr2 128735698 128736061 -124520522 - MLT1J2 LTR MaLR -50 400 2 225 320 29 74 chr2 128736855 128737030 -124519553 + L2 LINE L2 2912 3078 -194 191 325 145 0 chr2 128737159 128737242 -124519341 + L2 LINE L2 3162 3256 -16 194 186 139 0 chr2 128738126 128738169 -124518414 + MIR SINE MIR 93 141 -67 1278 159 4 4 chr2 128739101 128739333 -124517250 + L1PA15 LINE L1 5934 6165 0 196 327 99 10 chr2 128739746 128739847 -124516736 + L2 LINE L2 3138 3247 -25 24 0 0 0 chr2 128740525 128740549 -124516034 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr2 128740872 128740895 -124515688 + AT_rich Low_complexity Low_complexity 1 23 0 591 246 0 0 chr2 128741066 128741245 -124515338 + (TA)n Simple_repeat Simple_repeat 2 180 0 1470 172 34 52 chr2 128741245 128741536 -124515047 - AluJo SINE Alu -26 286 1 283 274 0 0 chr2 128742766 128742828 -124513755 - L2 LINE L2 -10 3303 3242 5089 73 32 5 chr2 128744569 128745309 -124511274 + MER4E LTR ERV1 7 766 0 297 0 0 0 chr2 128745465 128745498 -124511085 + (TG)n Simple_repeat Simple_repeat 2 34 0 185 333 65 0 chr2 128745556 128745649 -124510934 + MIR SINE MIR 84 182 -80 624 292 28 0 chr2 128745656 128745834 -124510749 - MER5A DNA MER1_type -6 183 1 306 231 28 9 chr2 128748468 128748576 -124508007 + (TA)n Simple_repeat Simple_repeat 1 110 0 1047 208 0 0 chr2 128748576 128748773 -124507810 - MER6B DNA MER2_type 0 210 14 266 250 0 12 chr2 128748782 128748862 -124507721 + (TA)n Simple_repeat Simple_repeat 1 79 0 443 325 101 5 chr2 128749459 128749668 -124506915 + MIR SINE MIR 16 244 -18 745 200 0 23 chr2 128750606 128750736 -124505847 + FLAM_A SINE Alu 1 127 -6 2087 110 0 7 chr2 128750742 128751086 -124505497 + AluSc SINE Alu 1 342 0 218 339 43 26 chr2 128751208 128751323 -124505260 + MIR3 SINE MIR 6 122 -86 225 200 25 100 chr2 128751327 128751407 -124505176 + L2 LINE L2 3240 3313 0 268 292 0 0 chr2 128751629 128751718 -124504865 - MER94 DNA DNA -40 94 6 811 281 96 32 chr2 128752315 128752753 -124503830 + MLT1C LTR MaLR 1 466 -1 6639 41 8 0 chr2 128754363 128755212 -124501371 - L1PA4 LINE L1 0 6155 5300 * 7192 47 1 1 chr2 128755211 128756161 -124500422 + L1PA4 LINE L1 4336 5285 -861 23 0 0 0 chr2 128756488 128756511 -124500072 + AT_rich Low_complexity Low_complexity 1 23 0 1324 199 45 49 chr2 128757470 128757757 -124498826 + AluJb SINE Alu 10 295 -17 7298 41 6 5 chr2 128758151 128759550 -124497033 - L1PA5 LINE L1 0 6154 4752 564 42 0 0 chr2 128759862 128759933 -124496650 + (CA)n Simple_repeat Simple_repeat 1 71 0 208 282 0 13 chr2 128760337 128760415 -124496168 + (TG)n Simple_repeat Simple_repeat 2 78 0 359 302 35 17 chr2 128761515 128761631 -124494952 + MIR SINE MIR 60 177 -85 506 264 14 0 chr2 128763984 128764132 -124492451 - MER115 DNA AcHobo -22 671 522 288 340 64 6 chr2 128764237 128764393 -124492190 - MER115 DNA AcHobo -371 322 158 21 0 0 0 chr2 128765489 128765510 -124491073 + AT_rich Low_complexity Low_complexity 1 21 0 2142 98 25 0 chr2 128765534 128765820 -124490763 + AluSx SINE Alu 1 293 -19 214 189 0 0 chr2 128766182 128766219 -124490364 + (TG)n Simple_repeat Simple_repeat 2 38 0 596 14 14 0 chr2 128767159 128767232 -124489351 + (TCTA)n Simple_repeat Simple_repeat 4 77 0 2078 129 0 7 chr2 128767232 128767515 -124489068 - AluSx SINE Alu -29 283 1 317 308 108 15 chr2 128768119 128768249 -124488334 + MIR SINE MIR 49 190 -72 22 56 0 0 chr2 128768295 128768331 -124488252 + AT_rich Low_complexity Low_complexity 1 36 0 291 338 0 4 chr2 128768527 128768674 -124487909 + MIR SINE MIR 60 255 -7 613 249 48 29 chr2 128769471 128769744 -124486839 - MER33 DNA MER1_type -14 310 33 2212 135 28 25 chr2 128770395 128770758 -124485825 - THE1B LTR MaLR 0 364 1 296 371 17 17 chr2 128772203 128772378 -124484205 + L3 LINE CR1 1043 1217 -360 227 338 0 13 chr2 128772488 128772565 -124484018 + L3 LINE CR1 1496 1571 -6 183 288 12 88 chr2 128773299 128773379 -124483204 - MIR SINE MIR -180 82 9 246 288 72 9 chr2 128774573 128774684 -124481899 - MER94 DNA DNA 0 134 17 327 25 0 0 chr2 128774724 128774764 -124481819 + (TG)n Simple_repeat Simple_repeat 2 41 0 255 264 84 45 chr2 128774947 128775102 -124481481 - MIR SINE MIR 0 262 102 231 114 0 0 chr2 128775648 128775683 -124480900 + (TA)n Simple_repeat Simple_repeat 2 36 0 1974 129 45 7 chr2 128775683 128775969 -124480614 - AluSq SINE Alu -16 297 1 22 0 0 0 chr2 128776540 128776562 -124480021 + AT_rich Low_complexity Low_complexity 1 22 0 252 356 13 34 chr2 128777646 128777795 -124478788 + MIR SINE MIR 8 153 -109 219 319 29 29 chr2 128778054 128778192 -124478391 + L2 LINE L2 3158 3295 -18 310 288 90 27 chr2 128778235 128778346 -124478237 - MIR SINE MIR -116 146 29 221 259 191 53 chr2 128778365 128778496 -124478087 - MIR SINE MIR -94 168 20 1368 225 67 23 chr2 128779147 128779493 -124477090 - MLT1A1 LTR MaLR -4 361 1 498 96 45 0 chr2 128779497 128779595 -124476988 - L1PA10 LINE L1 -154 5997 5887 251 352 37 28 chr2 128779604 128779712 -124476871 - L2 LINE L2 -37 3276 3168 1319 116 30 0 chr2 128779928 128780126 -124476457 + L1PA10 LINE L1 5961 6164 -4 803 147 0 0 chr2 128780431 128780547 -124476036 - FRAM SINE Alu -26 150 35 1545 208 3 10 chr2 128781017 128781358 -124475225 + AluJo SINE Alu 1 312 0 22 35 0 0 chr2 128781478 128781507 -124475076 + AT_rich Low_complexity Low_complexity 1 29 0 320 274 109 65 chr2 128781516 128781746 -124474837 - MIR SINE MIR -3 259 20 482 287 134 0 chr2 128781868 128782025 -124474558 - MER5B DNA MER1_type 0 178 1 358 264 23 0 chr2 128782089 128782176 -124474407 - MER5A DNA MER1_type -83 106 18 366 248 168 0 chr2 128782649 128782762 -124473821 - MIR SINE MIR -17 245 114 1602 198 0 17 chr2 128783428 128783726 -124472857 - AluJb SINE Alu -19 293 1 181 369 31 0 chr2 128783859 128783924 -124472659 - L2 LINE L2 -2 3311 3245 229 348 0 36 chr2 128784396 128784508 -124472075 + L3 LINE CR1 1468 1575 -2 382 292 151 23 chr2 128785081 128785300 -124471283 - MIR SINE MIR -4 258 12 190 294 0 0 chr2 128786126 128786177 -124470406 + MIR SINE MIR 96 146 -116 305 293 43 0 chr2 128786355 128786371 -124470212 + MIR SINE MIR 117 131 -131 366 23 0 0 chr2 128786371 128786414 -124470169 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 305 293 43 0 chr2 128786414 128786513 -124470070 + MIR SINE MIR 131 237 -25 647 239 115 30 chr2 128787073 128787378 -124469205 - HsTC2 DNA Tc2 -11 1887 1557 305 137 82 0 chr2 128787393 128787466 -124469117 - HsTC2 DNA Tc2 -1605 293 215 1654 239 65 10 chr2 128787773 128788368 -124468215 - MER114 LTR ERV -19 629 2 23 54 0 0 chr2 128788519 128788556 -124468027 + AT_rich Low_complexity Low_complexity 1 37 0 37 0 0 0 chr2 128788625 128788662 -124467921 + AT_rich Low_complexity Low_complexity 1 37 0 231 297 116 0 chr2 128788697 128788835 -124467748 - L1ME LINE L1 -348 5773 5620 28 61 0 0 chr2 128789070 128789119 -124467464 + AT_rich Low_complexity Low_complexity 1 49 0 202 333 11 44 chr2 128789685 128789775 -124466808 - L2 LINE L2 -4 3268 3182 480 319 85 50 chr2 128789910 128790221 -124466362 - L2 LINE L2 -260 3053 2719 23 0 0 0 chr2 128790308 128790331 -124466252 + AT_rich Low_complexity Low_complexity 1 23 0 1611 127 8 12 chr2 128790360 128790612 -124465971 + AluSg SINE Alu 40 290 -20 240 35 0 0 chr2 128790625 128790654 -124465929 + (CAAA)n Simple_repeat Simple_repeat 1 29 0 201 74 0 0 chr2 128790692 128790719 -124465864 + (T)n Simple_repeat Simple_repeat 1 27 0 420 158 69 0 chr2 128791031 128791132 -124465451 + MER41-int LTR ERV1 2761 2868 -3078 1244 120 67 0 chr2 128791132 128791340 -124465243 - MER41B LTR ERV1 -101 534 313 230 224 0 106 chr2 128791665 128791750 -124464833 - MLT1J2 LTR MaLR -7 443 368 1927 99 0 0 chr2 128793302 128793589 -124462994 - AluSg SINE Alu 0 326 40 3517 67 4 24 chr2 128793637 128793761 -124462822 - L1PA13 LINE L1 -1 6162 6037 4767 85 10 16 chr2 128793761 128794432 -124462151 - PABL_B LTR ERV1 0 667 1 1993 169 3 23 chr2 128794433 128794783 -124461800 - MER61A LTR ERV1 0 343 1 3517 67 4 24 chr2 128794783 128795148 -124461435 - L1PA13 LINE L1 -125 6038 5681 2168 77 3 3 chr2 128795923 128796238 -124460345 - AluY SINE Alu 0 311 1 1115 89 0 0 chr2 128796238 128796373 -124460210 - AluSq/x SINE Alu -177 135 1 278 50 25 0 chr2 128796624 128796664 -124459919 + (TTTTG)n Simple_repeat Simple_repeat 4 44 0 25 0 0 0 chr2 128797948 128797973 -124458610 + AT_rich Low_complexity Low_complexity 1 25 0 238 297 0 0 chr2 128798093 128798157 -124458426 + (TCCA)n Simple_repeat Simple_repeat 4 67 0 1380 201 77 4 chr2 128798356 128798630 -124457953 - AluJo SINE Alu -18 294 1 209 286 0 18 chr2 128798712 128798768 -124457815 - MIR3 SINE MIR -2 206 152 2459 84 0 0 chr2 128799892 128800202 -124456381 + AluY SINE Alu 1 310 -1 520 315 46 4 chr2 128800321 128800581 -124456002 - MER46C DNA MER2_type 0 338 68 222 150 0 0 chr2 128800596 128800636 -124455947 + (TAA)n Simple_repeat Simple_repeat 1 40 0 214 353 44 22 chr2 128800685 128800821 -124455762 - MIR3 SINE MIR -66 142 4 201 235 20 0 chr2 128801122 128801173 -124455410 + (CA)n Simple_repeat Simple_repeat 2 53 0 832 191 91 48 chr2 128802998 128803208 -124453375 - MER20 DNA MER1_type 0 219 1 352 261 169 2 chr2 128803536 128803786 -124452797 - L1MC/D LINE L1 -590 5576 5385 226 156 22 0 chr2 128804135 128804180 -124452403 + (TG)n Simple_repeat Simple_repeat 1 46 0 2267 101 23 7 chr2 128804534 128804842 -124451741 + AluSp SINE Alu 1 313 0 21 0 0 0 chr2 128805142 128805163 -124451420 + AT_rich Low_complexity Low_complexity 1 21 0 2223 108 0 0 chr2 128805236 128805573 -124451010 + AluSx SINE Alu 1 337 0 206 277 0 0 chr2 128806249 128806296 -124450287 - L2 LINE L2 -9 3263 3217 474 188 0 0 chr2 128806358 128806443 -124450140 - MLT1A1 LTR MaLR -37 328 244 222 136 0 0 chr2 128807223 128807267 -124449316 + (TG)n Simple_repeat Simple_repeat 1 44 0 245 352 14 0 chr2 128807450 128807521 -124449062 - L2 LINE L2 -25 3247 3176 1739 220 31 3 chr2 128808387 128808742 -124447841 + MLT1A1 LTR MaLR 1 365 0 359 328 23 47 chr2 128808931 128809102 -124447481 + MIR3 SINE MIR 13 179 -29 326 279 132 37 chr2 128809874 128810010 -124446573 + MIR SINE MIR 3 151 -111 744 171 0 0 chr2 128810010 128810133 -124446450 + AluJb SINE Alu 1 123 -189 195 152 0 0 chr2 128810133 128810179 -124446404 + (TAAA)n Simple_repeat Simple_repeat 1 46 0 747 197 10 86 chr2 128810180 128810340 -124446243 + AluJb SINE Alu 125 269 -43 2535 72 0 0 chr2 128810340 128810646 -124445937 - AluY SINE Alu -4 307 2 747 197 10 86 chr2 128810646 128810683 -124445900 + AluJb SINE Alu 269 307 -5 3597 116 15 19 chr2 128810716 128811309 -124445274 + MER4B LTR ERV1 11 601 -9 231 286 0 36 chr2 128811312 128811396 -124445187 + MIR SINE MIR 164 244 -18 2385 192 107 47 chr2 128812198 128812937 -124443646 - LTR48 LTR ERV1 -4 783 1 701 229 21 43 chr2 128813042 128813386 -124443197 - LTR48-int LTR ERV1 -163 5939 4572 4121 205 47 85 chr2 128813399 128813740 -124442843 - LTR48-int LTR ERV1 -1020 5311 4959 2179 135 32 19 chr2 128813740 128814110 -124442473 + THE1C LTR MaLR 1 375 0 4121 205 47 85 chr2 128814110 128815433 -124441150 - LTR48-int LTR ERV1 -1372 4959 3710 400 231 27 57 chr2 128815438 128815757 -124440826 - LTR48-int LTR ERV1 -1962 2918 1719 469 233 72 10 chr2 128815846 128816039 -124440544 - LTR48-int LTR ERV1 -3021 1915 1711 950 192 17 57 chr2 128816206 128816488 -124440095 - LTR48-int LTR ERV1 -222 3102 1278 829 233 0 6 chr2 128816488 128816660 -124439923 + AluJb SINE Alu 136 306 -6 908 169 0 94 chr2 128816685 128816939 -124439644 - LTR48-int LTR ERV1 -3446 2885 2656 704 250 18 27 chr2 128816984 128817212 -124439371 - LTR48-int LTR ERV1 -3675 2656 754 * 1100 293 11 36 chr2 128817211 128817576 -124439007 - LTR48-int LTR ERV1 -4068 2263 1908 743 236 86 91 chr2 128817628 128817962 -124438621 - LTR48-int LTR ERV1 -4329 1866 294 3804 231 35 49 chr2 128818035 128819190 -124437393 - LTR48-int LTR ERV1 -5179 1152 14 189 0 0 0 chr2 128819216 128819237 -124437346 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 882 248 45 39 chr2 128819238 128819617 -124436966 - LTR48 LTR ERV1 -19 755 389 644 206 85 26 chr2 128819629 128819741 -124436842 + LTR49-int LTR ERV1 448 577 -5754 10650 36 8 1 chr2 128819741 128821809 -124434774 - L1PA4 LINE L1 0 6155 4078 644 206 85 26 chr2 128821809 128821885 -124434698 + LTR49-int LTR ERV1 577 647 -5684 1314 196 116 12 chr2 128821885 128822222 -124434361 - LTR48 LTR ERV1 -415 372 1 344 159 93 65 chr2 128822862 128822969 -124433614 - LTR48 LTR ERV1 0 787 678 1928 203 69 75 chr2 128822975 128823673 -124432910 - LTR8A LTR ERV1 0 727 34 1050 210 57 38 chr2 128823696 128824010 -124432573 - LTR48 LTR ERV1 -120 667 348 517 221 0 9 chr2 128824016 128824129 -124432454 + AluJo SINE Alu 14 125 -187 314 297 0 11 chr2 128824142 128824233 -124432350 + L1MC4 LINE L1 6614 6703 -1339 330 153 0 0 chr2 128824234 128824293 -124432290 + (TA)n Simple_repeat Simple_repeat 2 60 0 825 203 0 13 chr2 128824293 128824446 -124432137 + AluJo SINE Alu 133 283 -29 887 216 82 20 chr2 128824525 128824780 -124431803 - LTR48 LTR ERV1 -516 271 1 5813 197 94 84 chr2 128824873 128827111 -124429472 - LTR48-int LTR ERV1 -158 6173 3914 2004 221 32 5 chr2 128827112 128827555 -124429028 - MSTB2 LTR MaLR -2 455 1 1844 208 13 46 chr2 128827561 128827855 -124428728 - MSTB2-int LTR MaLR -5 1646 1371 1531 203 48 0 chr2 128827855 128828145 -124428438 + AluJo SINE Alu 1 304 -8 1844 208 13 46 chr2 128828145 128828306 -124428277 - MSTB2-int LTR MaLR -280 1371 1206 363 258 48 24 chr2 128828329 128828453 -124428130 - LTR48 LTR ERV1 -657 130 4 1927 117 3 58 chr2 128830156 128830465 -124426118 + AluSx SINE Alu 1 292 -20 515 107 12 0 chr2 128830477 128830561 -124426022 + MLT1D LTR MaLR 419 503 -2 1982 58 0 23 chr2 128831196 128831457 -124425126 - AluY SINE Alu -16 295 41 850 218 22 9 chr2 128831500 128831860 -124424723 - L1M4 LINE L1 -1686 4460 3982 22 0 0 0 chr2 128831919 128831941 -124424642 + AT_rich Low_complexity Low_complexity 1 22 0 231 312 18 0 chr2 128832193 128832302 -124424281 + (TATATG)n Simple_repeat Simple_repeat 2 112 0 1759 178 51 6 chr2 128832463 128832795 -124423788 - MER7A DNA MER2_type -1 345 1 464 289 75 69 chr2 128832960 128833241 -124423342 + MARNA DNA Mariner 31 318 -268 2266 108 3 3 chr2 128833241 128833548 -124423035 - AluSc SINE Alu -2 307 1 464 289 75 69 chr2 128833548 128833743 -124422840 + MARNA DNA Mariner 318 510 -76 210 293 40 13 chr2 128835322 128835397 -124421186 - L2 LINE L2 -179 3093 3017 217 274 22 53 chr2 128835833 128835955 -124420628 + MIR SINE MIR 8 122 -86 207 0 0 0 chr2 128836653 128836676 -124419907 + (A)n Simple_repeat Simple_repeat 1 23 0 1239 277 52 7 chr2 128837707 128838133 -124418450 - MER110 LTR ERV1 0 491 47 22 35 0 0 chr2 128838169 128838198 -124418385 + AT_rich Low_complexity Low_complexity 1 29 0 24 67 0 0 chr2 128838417 128838462 -124418121 + AT_rich Low_complexity Low_complexity 1 45 0 22 56 0 0 chr2 128839516 128839552 -124417031 + AT_rich Low_complexity Low_complexity 1 36 0 40204 39 22 2 chr2 128839673 128845700 -124410883 - L1PA2 LINE L1 0 6155 3 233 261 125 45 chr2 128846290 128846466 -124410117 - L2 LINE L2 -2 3311 3122 1044 284 136 55 chr2 128846665 128846954 -124409629 + L2 LINE L2 2201 2465 -848 1561 154 3 11 chr2 128846954 128847240 -124409343 + L1MA10 LINE L1 6038 6321 -13 1044 284 136 55 chr2 128847240 128847997 -124408586 + L2 LINE L2 2465 3313 0 227 292 9 97 chr2 128848220 128848333 -124408250 + L2 LINE L2 3169 3271 -1 1108 230 0 21 chr2 128848466 128848705 -124407878 + AluJo SINE Alu 73 306 -6 354 386 59 13 chr2 128849428 128849664 -124406919 + MIR SINE MIR 1 247 -15 627 248 75 58 chr2 128850062 128850356 -124406227 - LTR16A LTR ERVL -134 316 18 252 259 74 80 chr2 128850556 128850597 -124405986 + MIR3 SINE MIR 16 56 -152 2345 93 88 0 chr2 128850597 128850940 -124405643 - THE1C LTR MaLR -2 373 1 252 259 74 80 chr2 128850940 128851060 -124405523 + MIR3 SINE MIR 56 176 -32 691 287 125 16 chr2 128851635 128852067 -124404516 + L1MC4a LINE L1 5420 5898 -1910 21 36 0 0 chr2 128852348 128852376 -124404207 + AT_rich Low_complexity Low_complexity 1 28 0 446 278 5 119 chr2 128852736 128852930 -124403653 + MER5B DNA MER1_type 3 174 -4 200 283 109 33 chr2 128853204 128853296 -124403287 + MIR3 SINE MIR 11 109 -99 789 245 43 62 chr2 128854114 128854615 -124401968 - MER39 LTR ERV1 -2 687 53 1401 233 50 16 chr2 128856780 128857157 -124399426 + MLT1B LTR MaLR 1 390 0 228 67 0 0 chr2 128857176 128857206 -124399377 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 1729 203 8 33 chr2 128857252 128857642 -124398941 - MSTD LTR MaLR -1 395 16 209 164 0 36 chr2 128858638 128858672 -124397911 + (TAA)n Simple_repeat Simple_repeat 2 35 -19 1565 212 7 0 chr2 128858672 128858965 -124397618 + AluJo SINE Alu 1 295 -17 209 164 0 36 chr2 128858965 128858985 -124397598 + (TAA)n Simple_repeat Simple_repeat 35 54 0 218 229 21 0 chr2 128858995 128859043 -124397540 - L2 LINE L2 -40 3232 3184 283 372 62 39 chr2 128859375 128859390 -124397193 - L2 LINE L2 -458 2856 2843 278 67 22 0 chr2 128859390 128859435 -124397148 + (TA)n Simple_repeat Simple_repeat 1 46 0 283 372 62 39 chr2 128859435 128859677 -124396906 - L2 LINE L2 -471 2843 2593 182 237 40 66 chr2 128859782 128859858 -124396725 - L2 LINE L2 0 3313 3240 1497 195 42 39 chr2 128859954 128860261 -124396322 + AluJo SINE Alu 1 308 -4 1414 192 115 28 chr2 128860499 128860863 -124395720 + MSTD LTR MaLR 1 396 0 2380 113 0 0 chr2 128861692 128862003 -124394580 - AluSq SINE Alu -2 311 1 876 204 160 53 chr2 128862054 128862219 -124394364 - MLT1A2 LTR MaLR 0 374 228 186 43 0 0 chr2 128862219 128862242 -124394341 + (GA)n Simple_repeat Simple_repeat 2 24 0 876 204 160 53 chr2 128862242 128862414 -124394169 - MLT1A2 LTR MaLR -146 228 1 255 290 0 0 chr2 128862843 128862905 -124393678 + MER5A DNA MER1_type 48 109 -80 22 0 0 0 chr2 128863699 128863721 -124392862 + AT_rich Low_complexity Low_complexity 1 22 0 208 276 138 69 chr2 128863822 128863938 -124392645 + MIR SINE MIR 32 139 -123 1571 177 30 9 chr2 128863938 128864266 -124392317 - MER44D DNA MER2_type -4 605 1 208 276 138 69 chr2 128864266 128864352 -124392231 + MIR SINE MIR 139 248 -14 284 331 32 24 chr2 128865071 128865195 -124391388 - MER5A DNA MER1_type -1 188 64 1104 194 0 5 chr2 128866169 128866375 -124390208 - MLT1B LTR MaLR 0 390 186 269 263 0 25 chr2 128866382 128866462 -124390121 + GA-rich Low_complexity Low_complexity 1 78 0 329 195 157 132 chr2 128866468 128866627 -124389956 - MLT1A1 LTR MaLR -211 163 1 235 361 115 25 chr2 128866719 128866841 -124389742 - L2 LINE L2 -4 3268 3136 1062 109 0 99 chr2 128867312 128867514 -124389069 - AluSp SINE Alu -2 311 130 203 68 91 0 chr2 128867526 128867570 -124389013 + (GTTTG)n Simple_repeat Simple_repeat 2 49 0 253 290 60 10 chr2 128868260 128868360 -124388223 + MLT1L LTR MaLR 94 198 -417 3274 65 16 0 chr2 128868366 128868810 -124387773 + MER11B LTR ERVK 1 451 -785 474 222 0 0 chr2 128869155 128869322 -124387261 + (CA)n Simple_repeat Simple_repeat 2 168 0 236 263 0 0 chr2 128869532 128869589 -124386994 + tRNA-Ala-GCG tRNA tRNA 1 57 -18 201 222 12 25 chr2 128870766 128870847 -124385736 + GA-rich Low_complexity Low_complexity 3 82 0 694 314 114 59 chr2 128873453 128874379 -124382204 + L2 LINE L2 1982 2958 -356 337 267 47 47 chr2 128874757 128874907 -124381676 + MER103 DNA DNA 1 150 -16 2142 201 22 71 chr2 128875186 128875767 -124380816 + MLT2B3 LTR ERVL 1 553 -1 240 368 38 5 chr2 128875906 128876091 -124380492 + MLT1L LTR MaLR 425 615 0 252 284 110 25 chr2 128877035 128877317 -124379266 + L1ME4a LINE L1 5662 5967 -154 3158 249 62 18 chr2 128877983 128879084 -124377499 + L1MC4a LINE L1 6659 7807 -1 265 334 153 23 chr2 128879122 128879508 -124377075 + L3 LINE CR1 468 903 -674 267 326 93 16 chr2 128879541 128879670 -124376913 + L3 LINE CR1 1237 1375 -202 2015 120 0 4 chr2 128880720 128880995 -124375588 + AluSq SINE Alu 37 310 -3 366 321 40 63 chr2 128881769 128882068 -124374515 - L1MC4a LINE L1 -1937 5871 5580 3093 155 54 41 chr2 128882293 128882956 -124373627 - L1MC1 LINE L1 -14 6319 5648 189 279 126 45 chr2 128883541 128883652 -124372931 - MIR SINE MIR -65 143 24 768 326 95 50 chr2 128884022 128885294 -124371289 - L2 LINE L2 -7 3306 1982 594 268 102 51 chr2 128885329 128885739 -124370844 - L2 LINE L2 -1607 1707 1277 180 337 61 20 chr2 128886533 128886631 -124369952 - MIR SINE MIR -56 206 105 27 49 0 0 chr2 128887370 128887411 -124369172 + AT_rich Low_complexity Low_complexity 1 41 0 264 386 8 15 chr2 128887852 128887984 -124368599 - MIR SINE MIR -112 150 20 203 336 35 35 chr2 128888578 128888721 -124367862 - MIR SINE MIR -1 261 119 368 336 22 8 chr2 128888790 128888924 -124367659 + L2 LINE L2 3178 3313 0 377 305 114 60 chr2 128889628 128890058 -124366525 - L3 LINE CR1 -3 1574 1122 1240 238 22 36 chr2 128890088 128890445 -124366138 + MLT1A1 LTR MaLR 1 352 -13 1637 133 89 113 chr2 128890652 128891111 -124365472 - LTR7 LTR ERV1 -2 448 1 1139 160 66 0 chr2 128891973 128892185 -124364398 - AluSg/x SINE Alu -1 311 86 27 0 0 0 chr2 128892947 128892974 -124363609 + AT_rich Low_complexity Low_complexity 1 27 0 1445 198 18 4 chr2 128892974 128893252 -124363331 + AluJo SINE Alu 1 282 -30 315 71 0 0 chr2 128893255 128893297 -124363286 + (TAA)n Simple_repeat Simple_repeat 2 43 0 436 307 42 36 chr2 128894284 128894476 -124362107 + MIR SINE MIR 9 201 -61 23 97 0 0 chr2 128894569 128894641 -124361942 + AT_rich Low_complexity Low_complexity 1 72 0 2341 43 17 10 chr2 128894963 128895263 -124361320 + AluY SINE Alu 1 302 -9 261 211 0 0 chr2 128895974 128896031 -124360552 + A-rich Low_complexity Low_complexity 1 57 0 2230 125 0 0 chr2 128897377 128897688 -124358895 + AluSx SINE Alu 1 311 -1 365 311 84 7 chr2 128897876 128898109 -124358474 - MIR SINE MIR -10 252 3 194 195 257 88 chr2 128898586 128898699 -124357884 + MIR3 SINE MIR 12 143 -65 183 184 0 0 chr2 128899066 128899104 -124357479 + (CA)n Simple_repeat Simple_repeat 2 39 0 365 316 44 0 chr2 128899129 128899265 -124357318 - MIR SINE MIR -116 146 5 198 209 0 0 chr2 128900088 128900131 -124356452 + (CAA)n Simple_repeat Simple_repeat 1 43 0 1478 197 65 39 chr2 128900504 128900860 -124355723 - MLT1A1 LTR MaLR 0 365 1 237 333 13 0 chr2 128900972 128901047 -124355536 - MIR SINE MIR -62 146 71 220 391 86 8 chr2 128901385 128901513 -124355070 - L2 LINE L2 -12 3260 3123 1841 149 54 3 chr2 128901760 128902056 -124354527 - AluSp SINE Alu -2 311 1 191 349 66 9 chr2 128902092 128902198 -124354385 - L2 LINE L2 -643 2671 2560 327 238 20 73 chr2 128903485 128903636 -124352947 - L2 LINE L2 -91 3222 3080 294 29 0 0 chr2 128903948 128903983 -124352600 + (T)n Simple_repeat Simple_repeat 1 35 0 2203 100 20 0 chr2 128904148 128904447 -124352136 - AluSx SINE Alu -7 305 1 2706 118 0 3 chr2 128906999 128907362 -124349221 - THE1B LTR MaLR -1 363 2 231 281 37 0 chr2 128908611 128908693 -124347890 + MIR SINE MIR 177 261 -1 389 254 68 22 chr2 128908801 128908947 -124347636 + MIR SINE MIR 55 203 -59 646 246 108 0 chr2 128908968 128909163 -124347420 - L1ME2 LINE L1 -166 5998 5783 * 1583 259 68 6 chr2 128909160 128909659 -124346924 - L1MEc LINE L1 -3035 3505 2976 409 282 103 21 chr2 128909664 128909840 -124346743 - L1MEc LINE L1 -4425 2296 2136 4048 144 29 9 chr2 128909840 128910498 -124346085 - L1MA4A LINE L1 -6 6297 5627 409 282 103 21 chr2 128910498 128910651 -124345932 - L1MEc LINE L1 -4585 2136 1940 2342 201 55 31 chr2 128910664 128911152 -124345431 - LTR48B LTR ERV1 0 644 145 43364 34 23 2 chr2 128911152 128917189 -124339394 + L1PA2 LINE L1 2 6155 0 891 167 19 13 chr2 128917189 128917345 -124339238 - LTR48B LTR ERV1 -487 157 1 302 252 175 0 chr2 128917346 128917449 -124339134 - L1MEc LINE L1 -4645 1895 1775 300 53 0 0 chr2 128917984 128918022 -124338561 + (TG)n Simple_repeat Simple_repeat 1 38 0 778 168 14 0 chr2 128919008 128919151 -124337432 + L1MB3 LINE L1 6039 6183 0 1966 173 81 11 chr2 128919201 128919583 -124337000 - LTR48B LTR ERV1 -234 410 2 240 235 0 0 chr2 128919583 128919634 -124336949 - L1MEc LINE L1 -4783 1938 1888 2172 118 7 7 chr2 128920214 128920519 -124336064 - AluSg SINE Alu -5 305 1 278 342 19 26 chr2 128921679 128921834 -124334749 + MER5A DNA MER1_type 4 157 -32 2855 13 0 0 chr2 128922134 128922445 -124334138 + AluYb8 SINE Alu 1 311 -7 2062 116 4 0 chr2 128923178 128923566 -124333017 - AluSg SINE Alu 0 393 5 1151 311 125 40 chr2 128923642 128923783 -124332800 + L2 LINE L2 1729 1857 -1457 1354 222 42 57 chr2 128923783 128924184 -124332399 + MLT2C1 LTR ERVL 3 397 0 1151 311 125 40 chr2 128924184 128924969 -124331614 + L2 LINE L2 1857 2734 -580 264 317 73 105 chr2 128925034 128925378 -124331205 + L2 LINE L2 2974 3306 -7 181 364 102 17 chr2 128925395 128925571 -124331012 - L3 LINE CR1 -1173 404 214 196 306 47 35 chr2 128925622 128925707 -124330876 - L2 LINE L2 0 3313 3228 281 244 63 94 chr2 128926058 128926185 -124330398 + MER5B DNA MER1_type 6 128 -50 468 304 166 14 chr2 128926336 128926553 -124330030 + MIR SINE MIR 8 257 -5 961 33 98 8 chr2 128926805 128926927 -124329656 - AluY SINE Alu -178 133 1 2878 13 0 0 chr2 128926934 128927245 -124329338 - AluY SINE Alu 0 311 1 240 283 206 0 chr2 128927987 128928079 -124328504 - L2 LINE L2 -7 3265 3155 192 40 0 0 chr2 128929322 128929347 -124327236 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 2292 115 0 0 chr2 128930727 128931039 -124325544 - AluSx SINE Alu 0 312 1 21 0 0 0 chr2 128931045 128931066 -124325517 + AT_rich Low_complexity Low_complexity 1 21 0 561 296 12 0 chr2 128931144 128931306 -124325277 - MER5A DNA MER1_type 0 189 26 480 248 86 81 chr2 128933492 128933714 -124322869 + MIR SINE MIR 20 242 -20 298 329 129 18 chr2 128933769 128934049 -124322534 - L2 LINE L2 -428 2886 2576 347 302 19 58 chr2 128934242 128934398 -124322185 - MIR SINE MIR -62 146 37 200 163 65 0 chr2 128934791 128934944 -124321639 + (TA)n Simple_repeat Simple_repeat 1 163 0 76 12 0 0 chr2 128934949 128935032 -124321551 + AT_rich Low_complexity Low_complexity 1 83 0 233 309 0 21 chr2 128935083 128935177 -124321406 - MIR SINE MIR -109 153 62 202 341 139 6 chr2 128935578 128935751 -124320832 + L2 LINE L2 2858 3053 -219 429 228 53 9 chr2 128937251 128937365 -124319218 - MER117 DNA MER1_type -77 120 2 187 219 0 0 chr2 128939722 128939763 -124316820 + MIR SINE MIR 112 152 -110 192 323 62 0 chr2 128940374 128940439 -124316144 + L2 LINE L2 3191 3259 -54 291 283 77 10 chr2 128940633 128940767 -124315816 - MIR SINE MIR -61 147 43 21 36 0 0 chr2 128940778 128940806 -124315777 + AT_rich Low_complexity Low_complexity 1 28 0 365 347 67 4 chr2 128942076 128942301 -124314282 - MIR SINE MIR -12 250 12 27 81 0 0 chr2 128942306 128942368 -124314215 + AT_rich Low_complexity Low_complexity 1 62 0 22 35 0 0 chr2 128944820 128944849 -124311734 + AT_rich Low_complexity Low_complexity 1 29 0 186 43 0 0 chr2 128945139 128945162 -124311421 + (TA)n Simple_repeat Simple_repeat 2 24 0 596 300 121 19 chr2 128946080 128946500 -124310083 + L1MC4a LINE L1 5324 5786 -2022 277 130 22 33 chr2 128946500 128946592 -124309991 + (TA)n Simple_repeat Simple_repeat 1 91 0 309 304 84 53 chr2 128946706 128946933 -124309650 + L1MC4a LINE L1 5852 6085 -1723 21 0 0 0 chr2 128947026 128947047 -124309536 + AT_rich Low_complexity Low_complexity 1 21 0 351 0 0 0 chr2 128947149 128947188 -124309395 + (TG)n Simple_repeat Simple_repeat 1 39 0 1860 132 3 17 chr2 128947648 128947966 -124308617 + AluSx SINE Alu 1 314 0 2273 82 0 41 chr2 128948417 128948733 -124307850 - AluSq SINE Alu -10 303 1 258 293 181 8 chr2 128949478 128949611 -124306972 + MIR SINE MIR 88 243 -19 27 29 0 0 chr2 128951013 128951047 -124305536 + AT_rich Low_complexity Low_complexity 1 34 0 205 359 104 9 chr2 128951053 128951159 -124305424 - L2 LINE L2 -194 3078 2963 1371 216 55 62 chr2 128951214 128951322 -124305261 - MER63 DNA MER1_type 0 1060 953 1971 134 0 0 chr2 128951322 128951637 -124304946 + AluY SINE Alu 1 315 0 1371 216 55 62 chr2 128951637 128951943 -124304640 - MER63 DNA MER1_type -107 953 648 473 196 116 58 chr2 128951943 128952081 -124304502 + MER58C DNA MER1_type 1 146 -69 599 218 7 7 chr2 128952088 128952230 -124304353 - MER63 DNA MER1_type -702 228 87 209 204 0 0 chr2 128952683 128952732 -124303851 + A-rich Low_complexity Low_complexity 1 49 0 224 294 43 11 chr2 128953211 128953303 -124303280 + MIR3 SINE MIR 5 99 -109 222 244 0 24 chr2 128953551 128953633 -124302950 + (TA)n Simple_repeat Simple_repeat 2 81 0 216 0 0 0 chr2 128953892 128953916 -124302667 + (A)n Simple_repeat Simple_repeat 1 24 0 1021 137 30 12 chr2 128954221 128954389 -124302194 + FRAM SINE Alu 1 170 -6 319 233 19 0 chr2 128954389 128954492 -124302091 + (TA)n Simple_repeat Simple_repeat 1 105 0 9154 228 74 13 chr2 128954868 128959414 -124297169 + L1PBa LINE L1 17 5181 -1681 234 0 0 0 chr2 128959414 128959440 -124297143 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 9154 228 74 13 chr2 128959440 128960264 -124296319 + L1PBa LINE L1 5181 5953 -909 3358 105 9 44 chr2 128960287 128960639 -124295944 + L1PB1 LINE L1 5026 5389 -762 1002 106 0 13 chr2 128960639 128960790 -124295793 - L1PA11 LINE L1 -3 6171 6023 3358 105 9 44 chr2 128960790 128960815 -124295768 + L1PB1 LINE L1 5389 5413 -738 439 37 0 0 chr2 128960815 128960869 -124295714 - L1PA6 LINE L1 -10 6144 6091 3358 105 9 44 chr2 128960869 128961315 -124295268 + L1PB1 LINE L1 5413 5791 -360 275 65 108 0 chr2 128961317 128961410 -124295173 + (TA)n Simple_repeat Simple_repeat 1 103 0 2286 144 0 3 chr2 128961410 128961778 -124294805 + L1PB1 LINE L1 5782 6148 -3 340 231 187 40 chr2 128961848 128962161 -124294422 + L1MC4a LINE L1 5296 5651 -646 1454 261 101 32 chr2 128962272 128962569 -124294014 + REP3 LTR ERV 1 276 -286 2048 121 6 32 chr2 128962569 128962883 -124293700 + AluSq SINE Alu 1 306 -7 1454 261 101 32 chr2 128962883 128963111 -124293472 + REP3 LTR ERV 276 562 0 339 250 42 62 chr2 128963129 128963273 -124293310 + L1MC4a LINE L1 5802 5942 -1866 246 273 61 91 chr2 128963506 128963737 -124292846 + L2 LINE L2 3090 3313 0 6134 23 0 0 chr2 128964084 128964792 -124291791 + L1PA3 LINE L1 5447 6154 -1 1327 112 0 21 chr2 128964797 128964985 -124291598 + AluSg/x SINE Alu 119 302 -8 28 0 0 0 chr2 128965070 128965098 -124291485 + AT_rich Low_complexity Low_complexity 1 28 0 207 285 62 76 chr2 128965132 128965276 -124291307 - MIR SINE MIR -74 188 47 557 298 30 47 chr2 128965824 128966269 -124290314 - Zaphod DNA AcHobo -25 4006 5 345 309 10 0 chr2 128966764 128966861 -124289722 + MER81 DNA DNA 17 114 0 350 319 77 11 chr2 128966971 128967153 -124289430 + MIR SINE MIR 56 249 -13 24 0 0 0 chr2 128968246 128968270 -124288313 + AT_rich Low_complexity Low_complexity 1 24 0 850 272 6 67 chr2 128968767 128969080 -124287503 - L2 LINE L2 -7 3306 3013 186 43 0 0 chr2 128969231 128969254 -124287329 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1499 222 82 75 chr2 128971231 128971781 -124284802 - MLT2B3 LTR ERVL 0 554 1 27 0 0 0 chr2 128972544 128972571 -124284012 + AT_rich Low_complexity Low_complexity 1 27 0 8713 152 8 3 chr2 128972662 128974954 -124281629 - L1PA11 LINE L1 0 6174 3865 24 0 0 0 chr2 128975386 128975410 -124281173 + AT_rich Low_complexity Low_complexity 1 24 0 189 74 0 0 chr2 128975664 128975691 -124280892 + (TA)n Simple_repeat Simple_repeat 2 28 0 991 182 30 15 chr2 128975705 128975908 -124280675 - Tigger1 DNA MER2_type -4 2414 2209 297 152 0 0 chr2 128975915 128975961 -124280622 - Tigger1 DNA MER2_type -2267 151 106 24 115 0 0 chr2 128976247 128976369 -124280214 + AT_rich Low_complexity Low_complexity 1 122 0 366 311 116 53 chr2 128976767 128976882 -124279701 - L1ME4a LINE L1 -17 6104 5998 583 88 0 0 chr2 128976882 128976962 -124279621 + MADE1 DNA Mariner 1 80 0 366 311 116 53 chr2 128976962 128977225 -124279358 - L1ME4a LINE L1 -123 5998 5702 467 292 53 0 chr2 128978310 128978423 -124278160 + L2 LINE L2 3134 3252 -20 1809 204 62 26 chr2 128978424 128979262 -124277321 - L1MDa LINE L1 -3594 2946 2079 1876 294 55 40 chr2 128979314 128980094 -124276489 - L1MDa LINE L1 -5733 807 16 600 284 99 10 chr2 128982616 128982817 -124273766 + MIR SINE MIR 42 260 -2 1414 197 52 52 chr2 128983812 128984177 -124272406 - MLT1A1 LTR MaLR 0 365 1 21 104 0 0 chr2 128984273 128984350 -124272233 + AT_rich Low_complexity Low_complexity 1 77 0 378 318 129 22 chr2 128984430 128984741 -124271842 - L1ME4a LINE L1 -175 5946 5603 324 362 64 7 chr2 128987221 128987362 -124269221 + MIR SINE MIR 20 168 -94 2576 65 0 0 chr2 128988158 128988467 -124268116 + AluY SINE Alu 1 309 -2 442 224 10 122 chr2 128988627 128988750 -124267833 - LTR41 LTR ERVL -591 182 89 3507 130 13 4 chr2 128988750 128989281 -124267302 + L1PB1 LINE L1 5611 6146 -5 442 224 10 122 chr2 128989281 128989362 -124267221 - LTR41 LTR ERVL -684 89 1 1139 196 90 16 chr2 128990142 128990387 -124266196 + L1MA9 LINE L1 5819 6081 -231 640 142 0 18 chr2 128990389 128990502 -124266081 + L1MA9 LINE L1 6180 6290 -22 848 217 52 64 chr2 128990573 128990900 -124265683 - MER33 DNA MER1_type 0 324 2 1852 148 10 17 chr2 128991066 128991454 -124265129 - AluSx SINE Alu 0 402 17 421 356 47 13 chr2 128992277 128992513 -124264070 - MIR SINE MIR -16 246 3 2174 188 21 3 chr2 128993181 128993564 -124263019 - MLT1B LTR MaLR 0 390 1 597 277 5 71 chr2 128993662 128993973 -124262610 - MLT1J LTR MaLR -128 383 58 1853 148 10 17 chr2 128994061 128994449 -124262134 + AluSx SINE Alu 17 402 0 848 217 52 64 chr2 128994615 128994942 -124261641 + MER33 DNA MER1_type 2 324 0 3630 199 80 68 chr2 128995011 128997288 -124259295 - L1MA9 LINE L1 -7 6293 3812 31 0 0 43 chr2 128997295 128997323 -124259260 + AT_rich Low_complexity Low_complexity 1 29 -15 1933 124 3 7 chr2 128997323 128997632 -124258951 - AluSc SINE Alu 0 308 1 31 0 0 43 chr2 128997632 128997648 -124258935 + AT_rich Low_complexity Low_complexity 29 44 0 342 0 0 0 chr2 128997959 128997997 -124258586 + (CA)n Simple_repeat Simple_repeat 2 39 0 2331 209 50 26 chr2 128998016 128998056 -124258527 - MLT2B3 LTR ERVL 0 554 516 330 80 0 0 chr2 128998056 128998106 -124258477 + (TG)n Simple_repeat Simple_repeat 1 50 0 2331 209 50 26 chr2 128998106 128998606 -124257977 - MLT2B3 LTR ERVL -38 516 1 287 264 128 14 chr2 128998908 128999056 -124257527 - L1ME4a LINE L1 -17 6104 5940 576 266 120 9 chr2 128999132 128999365 -124257218 - L1ME4a LINE L1 -294 5827 5569 223 342 26 17 chr2 129000012 129000129 -124256454 + L2 LINE L2 3188 3305 -8 754 203 0 16 chr2 129002466 129002594 -124253989 - AluJb SINE Alu -185 127 2 183 349 94 0 chr2 129002910 129003016 -124253567 - MIR3 SINE MIR -33 175 60 1255 200 138 79 chr2 129003777 129004248 -124252335 - MLT2B1 LTR ERVL -1 519 21 1273 212 129 6 chr2 129004355 129004681 -124251902 - MER31B LTR ERV1 -96 370 5 2163 106 7 7 chr2 129008697 129008999 -124247584 - AluSc SINE Alu -7 302 1 209 287 46 23 chr2 129009046 129009133 -124247450 + MIR SINE MIR 76 164 -98 236 309 150 33 chr2 129009157 129009382 -124247201 - MIR SINE MIR -12 250 2 269 297 22 0 chr2 129009474 129009565 -124247018 - MER113 DNA MER1_type? -428 93 1 2514 138 11 55 chr2 129010030 129010487 -124246096 - LTR23 LTR ERV1 0 437 1 834 259 85 4 chr2 129010677 129010913 -124245670 - MLT1F1 LTR MaLR 0 567 313 2443 155 57 44 chr2 129011000 129011170 -124245413 - LTR49 LTR ERV1 -65 530 364 1682 193 3 3 chr2 129011170 129011481 -124245102 + AluJb SINE Alu 1 311 -1 2443 155 57 44 chr2 129011481 129011833 -124244750 - LTR49 LTR ERV1 -231 364 1 488 277 42 81 chr2 129011833 129012076 -124244507 - MLT1F LTR MaLR -339 203 1 1752 126 4 27 chr2 129013954 129014217 -124242366 + AluSx SINE Alu 42 298 -14 336 258 11 21 chr2 129014219 129014312 -124242271 - L1MC4 LINE L1 -1337 6705 6614 369 0 0 0 chr2 129014342 129014383 -124242200 + (CA)n Simple_repeat Simple_repeat 2 42 0 350 102 34 0 chr2 129014394 129014453 -124242130 + Alu SINE Alu 239 299 -2 450 101 0 0 chr2 129014461 129014530 -124242053 + (TA)n Simple_repeat Simple_repeat 1 69 0 212 167 0 0 chr2 129015368 129015410 -124241173 + T-rich Low_complexity Low_complexity 2 43 0 254 333 88 6 chr2 129015444 129015615 -124240968 + MIR3 SINE MIR 21 205 -3 224 328 136 45 chr2 129016011 129016298 -124240285 + L3 LINE CR1 1158 1470 -107 1862 194 75 3 chr2 129017062 129017422 -124239161 - MLT1B LTR MaLR 0 390 5 185 224 0 61 chr2 129017464 129017513 -124239070 + L2 LINE L2 3183 3228 -85 352 302 88 62 chr2 129018520 129018861 -124237722 - L2 LINE L2 -58 3214 2865 200 268 73 12 chr2 129019516 129019598 -124236985 - L2 LINE L2 0 3313 3227 204 258 48 0 chr2 129020435 129020497 -124236086 - MIR SINE MIR -107 155 91 211 238 59 20 chr2 129021022 129021123 -124235460 + (ATGGTG)n Simple_repeat Simple_repeat 3 107 0 323 232 0 40 chr2 129021129 129021501 -124235082 + (TGG)n Simple_repeat Simple_repeat 1 356 0 333 230 0 47 chr2 129021558 129021969 -124234614 + (TGG)n Simple_repeat Simple_repeat 1 391 0 338 245 88 68 chr2 129021971 129022118 -124234465 + MER20 DNA MER1_type 68 217 -2 190 253 93 40 chr2 129022158 129022233 -124234350 + MIR3 SINE MIR 88 166 -42 2349 184 116 32 chr2 129022408 129022698 -124233885 + L1MB8 LINE L1 5474 5738 -440 2077 127 3 25 chr2 129022698 129023012 -124233571 + AluSq SINE Alu 1 307 -6 2349 184 116 32 chr2 129023012 129023366 -124233217 + L1MB8 LINE L1 5738 6178 0 328 296 160 24 chr2 129023476 129023682 -124232901 + MIR SINE MIR 8 241 -21 850 321 28 21 chr2 129024173 129024562 -124232021 - L1ME4a LINE L1 -285 5836 5445 417 274 115 0 chr2 129025113 129025270 -124231313 - MER5B DNA MER1_type -3 175 1 189 348 29 0 chr2 129025607 129025676 -124230907 + L2 LINE L2 3190 3260 -12 555 192 0 19 chr2 129026535 129026639 -124229944 - MER5B DNA MER1_type -2 176 75 225 349 62 66 chr2 129026767 129027008 -124229575 + L2 LINE L2 2925 3164 -108 245 357 70 7 chr2 129027184 129027327 -124229256 - MIR SINE MIR -42 220 69 246 105 0 0 chr2 129028553 129028591 -124227992 + (CA)n Simple_repeat Simple_repeat 2 39 0 267 315 107 0 chr2 129029243 129029392 -124227191 + MIR SINE MIR 73 237 -25 321 320 67 17 chr2 129029705 129029883 -124226700 - MIR SINE MIR -4 258 72 459 209 203 0 chr2 129032474 129032622 -124223961 + MER104 DNA MER2_type 3 180 0 212 258 67 11 chr2 129032659 129032748 -124223835 - L2 LINE L2 -463 2851 2758 1876 161 7 0 chr2 129034023 129034342 -124222241 + AluSx SINE Alu 1 321 0 3143 151 72 14 chr2 129034914 129035412 -124221171 - MER1A DNA MER1_type 0 527 1 2241 139 89 22 chr2 129035820 129036237 -124220346 - LTR56 LTR ERV1 0 445 1 188 253 198 0 chr2 129036698 129036789 -124219794 + MIR SINE MIR 84 192 -70 516 238 98 16 chr2 129037175 129037297 -124219286 - MER96 DNA MER1_type? 0 175 44 510 196 236 61 chr2 129037302 129037450 -124219133 - MER5A DNA MER1_type -10 179 6 677 229 117 11 chr2 129038013 129038201 -124218382 + L1PB4 LINE L1 5834 6041 -115 2007 140 6 9 chr2 129038209 129038538 -124218045 - MER41B LTR ERV1 -8 627 300 930 110 8 0 chr2 129038589 129038716 -124217867 + AluSc SINE Alu 4 131 -178 1345 122 39 47 chr2 129038725 129038980 -124217603 - MER41B LTR ERV1 -382 253 1 288 253 11 0 chr2 129039000 129039091 -124217492 + L1MA4A LINE L1 6189 6280 -23 2088 108 0 46 chr2 129039475 129039799 -124216784 + AluSc SINE Alu 1 309 0 833 178 33 17 chr2 129040314 129040494 -124216089 + MER5A DNA MER1_type 5 187 -2 368 279 27 9 chr2 129040508 129040619 -124215964 - MIR SINE MIR -115 147 35 288 53 0 0 chr2 129041031 129041069 -124215514 + (GA)n Simple_repeat Simple_repeat 1 38 0 379 198 12 12 chr2 129041176 129041257 -124215326 - MIR SINE MIR -141 121 41 1675 172 24 14 chr2 129042243 129042539 -124214044 + AluSg SINE Alu 1 299 -11 1128 88 6 16 chr2 129042558 129042740 -124213843 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 186 309 0 59 chr2 129043562 129043630 -124212953 + MIR SINE MIR 88 151 -111 286 307 40 10 chr2 129044543 129044644 -124211939 - L2 LINE L2 -2 3311 3208 255 31 0 0 chr2 129044716 129044748 -124211835 + (TTCA)n Simple_repeat Simple_repeat 4 35 0 217 293 112 52 chr2 129044768 129044884 -124211699 - L2 LINE L2 -32 3240 3118 182 172 0 0 chr2 129046315 129046344 -124210239 - L2 LINE L2 -18 3254 3226 385 312 58 7 chr2 129046537 129046691 -124209892 + L2 LINE L2 2899 3060 -212 298 301 0 0 chr2 129048062 129048135 -124208448 - MIR SINE MIR -63 145 73 336 113 19 0 chr2 129048699 129048752 -124207831 + MER3 DNA MER1_type 156 209 0 533 285 0 0 chr2 129049850 129049980 -124206603 + FLAM_A SINE Alu 1 130 -3 371 294 57 40 chr2 129050023 129050200 -124206383 - MER5A DNA MER1_type -9 180 1 302 186 71 0 chr2 129050333 129050403 -124206180 + MER103 DNA DNA 3 77 -89 180 0 0 0 chr2 129050404 129050424 -124206159 + (TG)n Simple_repeat Simple_repeat 1 20 0 277 323 84 36 chr2 129052791 129052958 -124203625 - MIR SINE MIR -53 209 35 185 250 25 0 chr2 129056664 129056744 -124199839 + (TATG)n Simple_repeat Simple_repeat 2 83 0 286 169 17 0 chr2 129056916 129056975 -124199608 - L1ME LINE L1 -303 5818 5759 2180 127 0 0 chr2 129057261 129057560 -124199023 + AluSx SINE Alu 1 299 -13 1851 189 0 3 chr2 129058455 129058761 -124197822 - AluJo SINE Alu -7 305 1 322 303 91 15 chr2 129060205 129060337 -124196246 + MIR SINE MIR 13 154 -108 1059 267 40 35 chr2 129060541 129060915 -124195668 - L2 LINE L2 -592 2722 2347 1951 282 70 27 chr2 129061536 129062586 -124193997 - L2 LINE L2 0 3313 2217 2173 90 0 37 chr2 129064276 129064576 -124192007 + AluSx SINE Alu 12 300 -12 235 258 54 0 chr2 129065166 129065259 -124191324 - L1MC5 LINE L1 -603 7358 7261 351 297 88 8 chr2 129065381 129065620 -124190963 - L1MC5 LINE L1 -733 7228 6971 411 113 0 0 chr2 129065660 129065731 -124190852 + (CATA)n Simple_repeat Simple_repeat 2 72 0 248 319 104 12 chr2 129065749 129065990 -124190593 - L1MC5 LINE L1 -1004 6957 6695 27 29 0 0 chr2 129066237 129066271 -124190312 + AT_rich Low_complexity Low_complexity 1 34 0 210 37 0 0 chr2 129066872 129066899 -124189684 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 418 377 47 23 chr2 129067707 129067964 -124188619 - L1ME4a LINE L1 -296 5825 5563 272 421 104 6 chr2 129068763 129068946 -124187637 - L2 LINE L2 0 3272 3072 697 298 58 37 chr2 129068998 129069374 -124187209 - MLT1I LTR MaLR -22 387 4 258 32 0 0 chr2 129069678 129069709 -124186874 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1988 117 7 0 chr2 129069714 129069995 -124186588 - AluSq SINE Alu -30 283 1 1042 140 0 0 chr2 129070662 129070833 -124185750 + L1MA2 LINE L1 6134 6304 0 2674 51 0 0 chr2 129070929 129071240 -124185343 - AluY SINE Alu 0 311 1 25 0 0 0 chr2 129072366 129072391 -124184192 + AT_rich Low_complexity Low_complexity 1 25 0 517 0 44 0 chr2 129073171 129073239 -124183344 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 542 244 0 8 chr2 129073270 129073389 -124183194 - MIR SINE MIR -105 157 40 2408 54 0 10 chr2 129074105 129074401 -124182182 + AluY SINE Alu 1 293 -18 183 393 56 0 chr2 129075416 129075505 -124181078 + L2 LINE L2 3195 3288 -25 503 323 43 16 chr2 129076244 129076430 -124180153 + MIR SINE MIR 42 232 -30 2279 93 3 7 chr2 129076862 129077153 -124179430 - AluSx SINE Alu -2 310 21 1328 106 0 5 chr2 129077619 129077817 -124178766 + L1PA14 LINE L1 5961 6157 -4 272 308 87 19 chr2 129079137 129079241 -124177342 + MIR SINE MIR 78 188 -74 255 203 130 77 chr2 129079555 129079675 -124176908 + MIR SINE MIR 44 171 -37 234 298 35 35 chr2 129080223 129080337 -124176246 + MIR SINE MIR 84 197 -65 258 294 56 16 chr2 129081030 129081156 -124175427 + L2 LINE L2 3182 3312 -1 204 122 0 0 chr2 129081478 129081519 -124175064 + (TA)n Simple_repeat Simple_repeat 1 41 0 522 304 55 18 chr2 129082000 129082220 -124174363 + MIR SINE MIR 32 259 -3 2212 81 0 62 chr2 129083369 129083690 -124172893 + AluSq SINE Alu 1 301 -12 7061 132 26 21 chr2 129083696 129083860 -124172723 + MER57A-int LTR ERV1 5932 6094 -1443 1498 184 12 8 chr2 129083860 129084156 -124172427 + AluJb SINE Alu 28 324 0 7061 132 26 21 chr2 129084156 129085199 -124171384 + MER57A-int LTR ERV1 6094 7146 -391 679 138 24 8 chr2 129085199 129085322 -124171261 + LTR54B LTR ERV1 3 127 -371 1538 143 31 0 chr2 129085322 129085580 -124171003 + MER57A-int LTR ERV1 7272 7537 0 1158 129 62 0 chr2 129085580 129085773 -124170810 + MER57A LTR ERV1 1 205 -198 972 203 74 51 chr2 129088037 129088431 -124168152 - MER69 DNA AcHobo -114 2412 2010 1160 280 56 7 chr2 129088434 129088848 -124167735 - MER69 DNA AcHobo -663 563 130 423 287 0 15 chr2 129088882 129089018 -124167565 + MLT2F LTR ERVL 6 139 -524 1532 236 55 7 chr2 129089047 129089467 -124167116 + MLT2F LTR ERVL 205 644 -19 1284 160 166 35 chr2 129090697 129091071 -124165512 - LTR29 LTR ERV1 -198 424 2 252 310 20 10 chr2 129092277 129092377 -124164206 + MIR SINE MIR 46 146 -62 2249 188 47 13 chr2 129092718 129093249 -124163334 - L1MB7 LINE L1 -12 6172 5624 943 258 84 21 chr2 129093312 129093567 -124163016 - L1MD2 LINE L1 -55 6304 6022 1696 211 47 5 chr2 129093567 129093947 -124162636 + MSTD LTR MaLR 1 396 0 943 258 84 21 chr2 129093947 129094024 -124162559 - L1MD2 LINE L1 -337 6022 5951 237 296 25 25 chr2 129095202 129095283 -124161300 - L2 LINE L2 -189 3083 3003 656 321 47 14 chr2 129095619 129096046 -124160537 - L1MC4a LINE L1 -1841 5967 5527 201 147 0 0 chr2 129096058 129096092 -124160491 + (TG)n Simple_repeat Simple_repeat 2 35 0 396 273 6 19 chr2 129096160 129096321 -124160262 + L1MC/D LINE L1 5331 5489 -2319 22 35 0 0 chr2 129096591 129096620 -124159963 + AT_rich Low_complexity Low_complexity 1 29 0 216 0 0 0 chr2 129096752 129096776 -124159807 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 40927 32 21 2 chr2 129096786 129102815 -124153768 - L1PA2 LINE L1 -5 6150 3 348 316 36 42 chr2 129102822 129102990 -124153593 - L1MC4a LINE L1 -1131 5015 4849 21 0 0 0 chr2 129102992 129103013 -124153570 + AT_rich Low_complexity Low_complexity 1 21 0 473 276 52 65 chr2 129103018 129103308 -124153275 - L1MC4a LINE L1 -2302 3844 3559 439 227 0 36 chr2 129103371 129103481 -124153102 - FRAM SINE Alu -4 172 67 26 0 0 0 chr2 129103836 129103862 -124152721 + AT_rich Low_complexity Low_complexity 1 26 0 517 323 20 24 chr2 129104054 129104308 -124152275 - MLT2F LTR ERVL -410 253 1 453 36 0 0 chr2 129104378 129104433 -124152150 + (GA)n Simple_repeat Simple_repeat 2 56 0 907 286 67 40 chr2 129104445 129104941 -124151642 + HAL1 LINE L1 130 638 -1869 309 256 78 98 chr2 129104948 129105346 -124151237 + HAL1 LINE L1 668 1057 -1450 739 208 34 11 chr2 129105381 129105559 -124151024 + L1MD2 LINE L1 5718 5899 -460 2275 92 13 0 chr2 129105709 129106014 -124150569 + AluSg SINE Alu 1 309 -1 917 145 0 26 chr2 129106128 129106280 -124150303 - FRAM SINE Alu -4 172 25 497 240 33 50 chr2 129106391 129106633 -124149950 + L1MC5 LINE L1 6926 7163 -798 239 197 338 0 chr2 129107156 129107227 -124149356 + MLT1H LTR MaLR 378 472 -77 2052 136 20 3 chr2 129107514 129107845 -124148738 + AluSg SINE Alu 1 336 0 22 94 0 0 chr2 129107845 129107909 -124148674 + AT_rich Low_complexity Low_complexity 1 64 0 886 294 24 11 chr2 129107996 129108458 -124148125 + HAL1 LINE L1 1945 2412 -95 2206 131 8 32 chr2 129108530 129108903 -124147680 - THE1B LTR MaLR 0 364 1 224 269 15 0 chr2 129108979 129109046 -124147537 - MIR SINE MIR -37 225 158 565 274 133 48 chr2 129109097 129109594 -124146989 - MLT1F LTR MaLR -3 539 1 303 297 30 30 chr2 129109594 129109695 -124146888 - MIR SINE MIR -153 109 9 224 369 27 9 chr2 129110453 129110564 -124146019 + L2 LINE L2 3155 3267 -5 2236 110 7 0 chr2 129110644 129110944 -124145639 + AluSg SINE Alu 1 302 -8 229 403 40 40 chr2 129110990 129111263 -124145320 - L2 LINE L2 -1 3271 2999 1329 183 8 46 chr2 129111286 129111549 -124145034 + AluJb SINE Alu 1 253 -59 234 271 192 20 chr2 129112244 129112395 -124144188 + MIR SINE MIR 13 189 -73 2124 99 10 0 chr2 129112658 129112951 -124143632 + AluSc SINE Alu 1 296 -13 217 324 114 9 chr2 129113138 129113243 -124143340 - L2 LINE L2 -17 3255 3140 199 281 292 10 chr2 129113581 129113677 -124142906 + MER5A DNA MER1_type 45 167 -22 * 203 255 298 21 chr2 129113591 129113685 -124142898 - MER5A DNA MER1_type -44 145 26 318 331 35 6 chr2 129113795 129113964 -124142619 - MIR SINE MIR -1 261 88 27 0 0 0 chr2 129114309 129114336 -124142247 + AT_rich Low_complexity Low_complexity 1 27 0 2076 143 3 0 chr2 129114920 129115236 -124141347 + AluSx SINE Alu 1 312 0 433 187 0 0 chr2 129116359 129116433 -124140150 - Tigger1 DNA MER2_type -24 2394 2321 3955 131 3 2 chr2 129116433 129117067 -124139516 - MER41B LTR ERV1 0 635 1 12324 130 40 54 chr2 129117069 129119424 -124137159 - Tigger1 DNA MER2_type -96 2322 1 1234 215 35 75 chr2 129119425 129119877 -124136706 - MLT1C LTR MaLR -33 434 1 300 304 55 72 chr2 129119895 129120132 -124136451 - L2 LINE L2 -112 3160 2928 494 312 5 11 chr2 129120698 129120884 -124135699 - LTR33 LTR ERVL -331 190 6 1419 209 54 11 chr2 129121627 129121977 -124134606 + MLT2D LTR ERVL 2 366 -48 359 108 0 43 chr2 129121992 129122085 -124134498 + (TA)n Simple_repeat Simple_repeat 1 89 0 192 336 56 28 chr2 129122157 129122264 -124134319 + L2 LINE L2 3056 3165 -107 326 331 130 0 chr2 129122643 129122778 -124133805 + MIR SINE MIR 12 165 -43 238 358 0 0 chr2 129122758 129122825 -124133758 + MIR SINE MIR 86 152 -110 * 381 43 0 0 chr2 129122874 129122921 -124133662 + (CA)n Simple_repeat Simple_repeat 2 48 0 5194 102 4 3 chr2 129124095 129124834 -124131749 - L1PA11 LINE L1 0 6174 5435 198 118 0 0 chr2 129124857 129124891 -124131692 + (CA)n Simple_repeat Simple_repeat 1 34 0 256 351 63 18 chr2 129125256 129125367 -124131216 - L2 LINE L2 -9 3263 3148 284 323 67 30 chr2 129125634 129125798 -124130785 + MIR SINE MIR 70 239 -23 409 324 11 6 chr2 129126507 129126686 -124129897 + (TTCA)n Simple_repeat Simple_repeat 1 180 0 335 316 203 28 chr2 129126998 129127175 -124129408 - MIR SINE MIR -6 256 49 283 277 59 0 chr2 129127369 129127469 -124129114 + MIR SINE MIR 102 207 -55 181 333 28 28 chr2 129127469 129127577 -124129006 - MER5A DNA MER1_type 0 189 82 382 304 0 51 chr2 129128050 129128241 -124128342 + MIR SINE MIR 76 251 -11 22412 169 21 21 chr2 129128428 129134870 -124121713 + L1PA10 LINE L1 10 6482 -1 1856 149 92 16 chr2 129134878 129135247 -124121336 - MSTA LTR MaLR -26 402 6 8199 177 42 45 chr2 129135252 129136662 -124119921 - MSTA-int LTR MaLR 0 1651 245 1626 191 18 11 chr2 129136662 129136944 -124119639 - AluJb SINE Alu -23 289 6 8199 177 42 45 chr2 129136944 129137189 -124119394 - MSTA-int LTR MaLR -1406 245 1 2019 173 70 8 chr2 129137194 129137592 -124118991 - MSTA LTR MaLR -5 423 1 444 284 40 72 chr2 129138290 129138512 -124118071 + MIR SINE MIR 48 262 0 264 77 0 0 chr2 129138786 129138825 -124117758 + (TG)n Simple_repeat Simple_repeat 2 40 0 685 280 126 74 chr2 129138932 129140198 -124116385 - L1MC4 LINE L1 -1 8041 6523 321 89 0 0 chr2 129140198 129140243 -124116340 + (TG)n Simple_repeat Simple_repeat 2 46 0 685 280 126 74 chr2 129140243 129141125 -124115458 - L1MC4 LINE L1 -1519 6523 5688 207 150 0 75 chr2 129141540 129141580 -124115003 + L2 LINE L2 3182 3218 -95 22 0 0 0 chr2 129142256 129142278 -124114305 + AT_rich Low_complexity Low_complexity 1 22 0 2318 99 6 3 chr2 129142990 129143302 -124113281 + AluSp SINE Alu 1 313 0 271 294 37 22 chr2 129143402 129143538 -124113045 - MIR3 SINE MIR -68 140 3 192 77 0 0 chr2 129144436 129144462 -124112121 + (TG)n Simple_repeat Simple_repeat 2 27 0 284 327 55 9 chr2 129145901 129146011 -124110572 - MIR SINE MIR -119 143 29 297 288 68 38 chr2 129146058 129146190 -124110393 - MIR SINE MIR -126 136 1 259 284 0 0 chr2 129146641 129146708 -124109875 + (TGAA)n Simple_repeat Simple_repeat 3 69 0 276 30 0 0 chr2 129147040 129147073 -124109510 + (CA)n Simple_repeat Simple_repeat 1 33 0 1482 196 57 11 chr2 129147444 129147725 -124108858 + AluJo SINE Alu 1 294 -18 2189 142 82 17 chr2 129147837 129148239 -124108344 - MSTA LTR MaLR 0 428 1 339 345 26 63 chr2 129148264 129148455 -124108128 - MIR3 SINE MIR -23 185 2 292 222 24 127 chr2 129148537 129148663 -124107920 + MIR3 SINE MIR 85 197 -11 970 169 0 19 chr2 129148972 129149132 -124107451 + FRAM SINE Alu 1 157 -9 408 296 26 0 chr2 129149496 129149611 -124106972 + MIR SINE MIR 31 148 -114 218 122 24 0 chr2 129150776 129150817 -124105766 + A-rich Low_complexity Low_complexity 2 43 0 489 354 38 13 chr2 129151759 129151996 -124104587 + MIR SINE MIR 13 255 -7 844 245 49 20 chr2 129152913 129153219 -124103364 - L1ME LINE L1 -297 5824 5510 269 333 54 9 chr2 129153540 129153751 -124102832 - MIR SINE MIR -3 259 40 219 110 16 79 chr2 129155497 129155624 -124100959 + (TA)n Simple_repeat Simple_repeat 2 120 0 453 264 187 52 chr2 129155919 129156430 -124100153 - L2 LINE L2 -1 3312 2726 260 229 16 0 chr2 129156850 129156911 -124099672 + CT-rich Low_complexity Low_complexity 3 64 0 258 32 0 0 chr2 129157109 129157140 -124099443 + (TTA)n Simple_repeat Simple_repeat 3 33 0 4124 77 0 2 chr2 129157140 129157683 -124098900 - L1PA8 LINE L1 -18 6154 5613 207 0 0 0 chr2 129157683 129157706 -124098877 + (TA)n Simple_repeat Simple_repeat 1 23 0 1497 226 3 10 chr2 129157761 129158167 -124098416 + AluJo SINE Alu 1 404 0 235 200 0 0 chr2 129158176 129158226 -124098357 + Alu SINE Alu 250 299 0 189 360 12 12 chr2 129158342 129158428 -124098155 - MIR SINE MIR -158 104 19 280 289 13 0 chr2 129159055 129159131 -124097452 + MIR SINE MIR 65 141 -121 348 309 177 38 chr2 129159447 129159978 -124096605 + L2 LINE L2 2373 2977 -337 475 248 47 47 chr2 129160098 129160247 -124096336 + L2 LINE L2 3164 3312 -1 446 315 41 10 chr2 129160354 129160551 -124096032 + MIR3 SINE MIR 6 208 0 374 295 18 9 chr2 129161143 129161255 -124095328 + MIR SINE MIR 45 157 -105 22 0 0 0 chr2 129161571 129161593 -124094990 + AT_rich Low_complexity Low_complexity 1 22 0 671 95 9 0 chr2 129162143 129162248 -124094335 + (GGAA)n Simple_repeat Simple_repeat 4 109 0 1011 196 20 12 chr2 129162564 129162819 -124093764 - Charlie5 DNA MER1_type -27 2585 2329 579 157 0 0 chr2 129162819 129162921 -124093662 - Tigger3b DNA MER2_type -168 1064 963 1247 146 0 0 chr2 129162927 129163119 -124093464 + AluSg/x SINE Alu 121 312 0 4264 155 33 58 chr2 129163130 129164007 -124092576 - Tigger3b DNA MER2_type -2093 935 82 3984 60 67 6 chr2 129164007 129164544 -124092039 - L1PA7 LINE L1 0 6154 5585 4264 155 33 58 chr2 129164544 129164625 -124091958 - Tigger3b DNA MER2_type -2945 83 1 299 250 191 37 chr2 129164655 129164791 -124091792 - MIR SINE MIR -82 180 24 180 286 89 45 chr2 129166134 129166246 -124090337 + L2 LINE L2 3155 3271 -1 1087 162 0 0 chr2 129166325 129166498 -124090085 + FRAM SINE Alu 4 176 0 658 323 58 32 chr2 129166557 129166828 -124089755 - MLT1I LTR MaLR -51 358 75 2229 118 0 0 chr2 129166828 129167132 -124089451 - AluSq SINE Alu -9 304 1 658 323 58 32 chr2 129167132 129167207 -124089376 - MLT1I LTR MaLR -334 75 3 200 227 0 0 chr2 129167233 129167277 -124089306 + A-rich Low_complexity Low_complexity 1 44 0 2441 64 0 0 chr2 129167750 129168045 -124088538 + AluY SINE Alu 1 295 -16 1621 183 29 14 chr2 129168152 129168497 -124088086 - MER4D LTR ERV1 -7 896 547 1278 175 71 21 chr2 129168530 129168810 -124087773 - MER49 LTR ERV1 -629 294 1 1361 289 152 17 chr2 129171407 129172065 -124084518 + L2 LINE L2 1883 2629 -685 643 171 7 7 chr2 129172246 129172386 -124084197 + CT-rich Low_complexity Low_complexity 3 142 0 1022 203 41 6 chr2 129172388 129172768 -124083815 - L1M4 LINE L1 -686 5488 5090 678 309 77 31 chr2 129172829 129173182 -124083401 + L2 LINE L2 2923 3291 -22 269 250 22 14 chr2 129173496 129173583 -124083000 + MIR SINE MIR 63 152 -56 2102 155 0 0 chr2 129173776 129174085 -124082498 - AluSx SINE Alu -3 309 1 1797 203 29 13 chr2 129174141 129174525 -124082058 - MLT1B LTR MaLR 0 390 1 315 272 40 10 chr2 129174969 129175171 -124081412 + L1MEd LINE L1 896 1103 -5016 213 313 16 0 chr2 129175843 129175907 -124080676 - MIR SINE MIR -63 145 81 488 237 47 11 chr2 129175989 129176179 -124080404 - L1MB8 LINE L1 -1 6177 5981 631 256 29 4 chr2 129176202 129176475 -124080108 - L1M4 LINE L1 -2832 3812 3533 726 154 0 31 chr2 129176475 129176637 -124079946 + CT-rich Low_complexity Low_complexity 4 160 0 579 29 0 0 chr2 129176655 129176724 -124079859 + (TTTC)n Simple_repeat Simple_repeat 2 70 0 1644 254 66 29 chr2 129176738 129177638 -124078945 - L1M4 LINE L1 -3104 3540 2608 246 287 10 0 chr2 129177664 129177765 -124078818 - L1M4 LINE L1 -4182 2464 2363 3784 250 56 13 chr2 129177884 129179084 -124077499 - L1M4 LINE L1 -5275 1267 17 6156 78 3 43 chr2 129179149 129180009 -124076574 - LTR12 LTR ERV1 0 826 1 292 215 25 125 chr2 129180079 129180279 -124076304 - TAR1 Satellite telomeric -1926 185 6 * 2096 214 21 36 chr2 129180100 129180661 -124075922 - LTR60 LTR ERV1 -31 555 3 378 360 34 73 chr2 129180861 129181094 -124075489 + L2 LINE L2 3044 3267 -5 282 229 164 49 chr2 129181581 129181703 -124074880 - MIR SINE MIR -90 172 37 1633 127 53 46 chr2 129181717 129182000 -124074583 - AluJb SINE Alu -17 295 11 377 312 9 28 chr2 129182306 129182415 -124074168 + L2 LINE L2 2990 3096 -176 417 250 0 52 chr2 129182697 129182833 -124073750 - L1M4b LINE L1 -5371 1175 1047 2141 104 3 53 chr2 129183149 129183467 -124073116 + AluSx SINE Alu 1 302 -10 372 256 12 81 chr2 129183509 129183681 -124072902 - L1M4b LINE L1 -5503 1039 880 1986 136 3 3 chr2 129183699 129184008 -124072575 - AluY SINE Alu -2 309 1 191 59 0 59 chr2 129184009 129184043 -124072540 + (TTTTTG)n Simple_repeat Simple_repeat 2 33 0 919 261 80 21 chr2 129184066 129184441 -124072142 - L1M4b LINE L1 -5654 888 492 332 311 80 9 chr2 129184693 129184905 -124071678 - L1M4b LINE L1 -6300 242 16 1296 129 0 5 chr2 129185536 129185746 -124070837 - L1PB2 LINE L1 -2 6149 5941 776 304 13 4 chr2 129186868 129187105 -124069478 - MIR SINE MIR -15 247 9 222 118 0 0 chr2 129187886 129187920 -124068663 + (TG)n Simple_repeat Simple_repeat 2 35 0 441 236 118 21 chr2 129188682 129188918 -124067665 + MLT1H1 LTR MaLR 290 589 -1 563 197 26 0 chr2 129189055 129189172 -124067411 + MER3 DNA MER1_type 1 120 -89 381 349 89 57 chr2 129191286 129191636 -124064947 - L2 LINE L2 -10 3262 2902 218 297 8 0 chr2 129191696 129191824 -124064759 + (TG)n Simple_repeat Simple_repeat 2 130 0 243 289 13 26 chr2 129192572 129192648 -124063935 + L2 LINE L2 2585 2659 -655 267 301 27 46 chr2 129192741 129192960 -124063623 + L2 LINE L2 2855 3069 -203 2963 169 40 40 chr2 129193035 129193685 -124062898 - MER39B LTR ERV1 0 653 4 230 301 0 14 chr2 129193765 129193838 -124062745 + L2 LINE L2 3201 3272 0 429 307 60 21 chr2 129194012 129194315 -124062268 + MLT1H LTR MaLR 79 372 -183 1035 211 50 0 chr2 129194393 129194592 -124061991 + MER58A DNA MER1_type 1 209 -15 262 155 50 34 chr2 129194588 129194660 -124061923 + MLT1H1 LTR MaLR 477 555 0 * 282 349 46 33 chr2 129195214 129195366 -124061217 + MIR SINE MIR 2 155 -107 252 292 83 31 chr2 129195687 129195783 -124060800 - MIR SINE MIR 0 262 162 270 167 0 0 chr2 129195942 129196002 -124060581 + A-rich Low_complexity Low_complexity 1 60 0 22 0 0 0 chr2 129196356 129196378 -124060205 + AT_rich Low_complexity Low_complexity 1 22 0 385 270 54 18 chr2 129196425 129196536 -124060047 - MIR SINE MIR -140 122 8 2979 227 74 19 chr2 129196733 129197142 -124059441 + MER63C DNA MER1_type 2 387 -673 261 0 0 0 chr2 129197142 129197171 -124059412 + (TG)n Simple_repeat Simple_repeat 2 30 0 2979 227 74 19 chr2 129197171 129197642 -124058941 + MER63C DNA MER1_type 387 930 0 280 352 44 44 chr2 129197992 129198174 -124058409 - MIR SINE MIR -33 229 48 1759 190 24 13 chr2 129199237 129199616 -124056967 - L1MC3 LINE L1 0 7785 7403 186 191 167 0 chr2 129199941 129199983 -124056600 - L2 LINE L2 -14 3258 3210 * 453 270 40 20 chr2 129199951 129200099 -124056484 - MIR SINE MIR -25 237 87 361 366 28 14 chr2 129200151 129200364 -124056219 - L2 LINE L2 -471 2843 2628 288 0 0 0 chr2 129200523 129200555 -124056028 + (CA)n Simple_repeat Simple_repeat 2 33 0 620 240 114 0 chr2 129201089 129201264 -124055319 + MER3 DNA MER1_type 12 206 -3 389 65 65 13 chr2 129201921 129201998 -124054585 + CT-rich Low_complexity Low_complexity 3 83 0 3845 191 19 14 chr2 129201998 129202774 -124053809 - L1MB7 LINE L1 -23 6161 5382 300 278 0 16 chr2 129202794 129202920 -124053663 - L1MB7 LINE L1 -826 5320 5197 3949 206 19 43 chr2 129202941 129202995 -124053588 - L1MA9 LINE L1 -37 6275 6221 550 100 0 0 chr2 129202995 129203075 -124053508 + MADE1 DNA Mariner 1 80 0 3949 206 19 43 chr2 129203075 129204023 -124052560 - L1MA9 LINE L1 -91 6221 5297 26 30 0 0 chr2 129204092 129204125 -124052458 + AT_rich Low_complexity Low_complexity 1 33 0 432 0 0 0 chr2 129204494 129204542 -124052041 + (T)n Simple_repeat Simple_repeat 1 48 0 740 168 23 0 chr2 129205610 129205783 -124050800 + CT-rich Low_complexity Low_complexity 4 180 0 382 252 35 42 chr2 129207683 129207760 -124048823 + L2 LINE L2 3169 3246 -67 2238 116 0 0 chr2 129207760 129208070 -124048513 + AluSx SINE Alu 1 310 -2 382 252 35 42 chr2 129208070 129208135 -124048448 + L2 LINE L2 3246 3310 -3 1941 177 0 0 chr2 129208979 129209290 -124047293 + AluSx SINE Alu 1 311 -1 1020 160 3 3 chr2 129209292 129209640 -124046943 + GA-rich Low_complexity Low_complexity 1 349 0 250 288 0 0 chr2 129209740 129209806 -124046777 + GA-rich Low_complexity Low_complexity 1 66 0 1247 79 0 6 chr2 129209812 129209990 -124046593 + (GAA)n Simple_repeat Simple_repeat 1 177 0 273 319 60 17 chr2 129210413 129210529 -124046054 + MIR SINE MIR 25 145 -63 318 318 168 11 chr2 129210956 129211230 -124045353 - LTR33 LTR ERVL -37 484 168 366 23 0 0 chr2 129211999 129212042 -124044541 + (TG)n Simple_repeat Simple_repeat 1 43 0 829 191 80 157 chr2 129212172 129212674 -124043909 - LTR37B LTR ERV1 0 468 6 527 169 81 37 chr2 129212956 129213092 -124043491 - Charlie8 DNA MER1_type -2234 183 42 186 426 12 12 chr2 129213434 129213603 -124042980 + L2 LINE L2 1799 1967 -1347 2137 116 0 0 chr2 129213773 129214065 -124042518 + AluSg SINE Alu 1 292 -18 32 0 0 0 chr2 129214065 129214097 -124042486 + AT_rich Low_complexity Low_complexity 1 32 0 245 219 60 126 chr2 129214275 129214370 -124042213 - MLT1L LTR MaLR 0 615 532 1560 138 29 4 chr2 129214370 129214448 -124042135 + AluSc SINE Alu 43 118 -191 207 0 0 0 chr2 129214448 129214471 -124042112 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1560 138 29 4 chr2 129214471 129214631 -124041952 + AluSc SINE Alu 118 287 -22 245 219 60 126 chr2 129214631 129214686 -124041897 - MLT1L LTR MaLR -83 532 475 417 280 96 25 chr2 129214834 129214991 -124041592 - MLT1L LTR MaLR -374 241 74 701 244 86 14 chr2 129215051 129215260 -124041323 - MIR SINE MIR -35 227 4 1160 220 0 0 chr2 129215315 129215524 -124041059 - MLT1A1 LTR MaLR 0 365 157 879 171 7 13 chr2 129215528 129215680 -124040903 - FRAM SINE Alu -12 164 14 789 151 12 48 chr2 129215691 129215857 -124040726 - MLT1A1 LTR MaLR -205 160 1 413 145 13 0 chr2 129215910 129215986 -124040597 + CT-rich Low_complexity Low_complexity 1 77 0 1332 28 11 11 chr2 129215986 129216164 -124040419 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 1967 143 7 0 chr2 129216171 129216458 -124040125 - AluSx SINE Alu -23 289 1 25 0 0 0 chr2 129217431 129217456 -124039127 + AT_rich Low_complexity Low_complexity 1 25 0 288 278 67 56 chr2 129217971 129218061 -124038522 - L2 LINE L2 -9 3263 3173 609 275 135 9 chr2 129218275 129218295 -124038288 - MLT1J LTR MaLR -260 251 235 895 52 0 0 chr2 129218295 129218410 -124038173 - L1PA5 LINE L1 0 6154 6040 609 275 135 9 chr2 129218410 129218611 -124037972 - MLT1J LTR MaLR -276 235 2 22 0 0 0 chr2 129218908 129218930 -124037653 + AT_rich Low_complexity Low_complexity 1 22 0 33 66 0 0 chr2 129219262 129219323 -124037260 + AT_rich Low_complexity Low_complexity 1 61 0 394 356 0 61 chr2 129220280 129220460 -124036123 - MER5A DNA MER1_type 0 189 21 24 77 0 0 chr2 129220976 129221028 -124035555 + AT_rich Low_complexity Low_complexity 1 52 0 1735 126 0 16 chr2 129221488 129221743 -124034840 + AluSc SINE Alu 45 295 -14 281 381 44 12 chr2 129221924 129222084 -124034499 + MIR SINE MIR 88 252 -10 193 200 86 0 chr2 129222977 129223012 -124033571 + MIR SINE MIR 114 151 -57 2072 119 3 22 chr2 129223979 129224331 -124032252 + AluSx SINE Alu 1 312 0 1299 253 13 35 chr2 129224558 129224953 -124031630 - MLT1B LTR MaLR -4 386 1 1818 236 38 7 chr2 129224953 129225428 -124031155 - MLT1B-int LTR MaLR 0 1735 956 266 182 0 0 chr2 129225675 129225730 -124030853 - MLT1B-int LTR MaLR -488 883 829 1960 204 23 13 chr2 129225738 129226333 -124030250 - MLT1B-int LTR MaLR -648 723 4 1461 220 11 55 chr2 129226343 129226646 -124029937 - MLT1B LTR MaLR -8 382 95 1985 132 0 4 chr2 129226646 129226967 -124029616 + AluSc SINE Alu 1 320 0 1461 220 11 55 chr2 129226967 129227025 -124029558 - MLT1B LTR MaLR -295 95 36 656 234 85 0 chr2 129227061 129227202 -124029381 - MER21B LTR ERV1 -381 482 330 189 0 0 0 chr2 129227706 129227727 -124028856 + (T)n Simple_repeat Simple_repeat 1 21 0 785 102 66 0 chr2 129228073 129228210 -124028373 - L1MA9 LINE L1 0 6312 6167 353 204 26 9 chr2 129228219 129228332 -124028251 + CT-rich Low_complexity Low_complexity 2 116 0 2148 162 24 0 chr2 129228340 129228710 -124027873 - L1MA9 LINE L1 -147 6165 5787 208 146 55 18 chr2 129228733 129228788 -124027795 + (TATATG)n Simple_repeat Simple_repeat 2 58 0 7808 193 47 18 chr2 129228788 129229002 -124027581 - L1MA9 LINE L1 -693 5619 5413 1578 167 68 44 chr2 129229002 129229368 -124027215 + THE1C LTR MaLR 1 375 0 7808 193 47 18 chr2 129229368 129231263 -124025320 - L1MA9 LINE L1 -899 5413 3454 517 291 46 0 chr2 129231859 129232010 -124024573 - MLT1G LTR MaLR -423 167 10 23 54 0 0 chr2 129232134 129232171 -124024412 + AT_rich Low_complexity Low_complexity 1 37 0 465 190 19 63 chr2 129232318 129232476 -124024107 + MER104 DNA Tc2 29 179 -1 215 250 0 0 chr2 129233117 129233169 -124023414 + (TA)n Simple_repeat Simple_repeat 2 53 0 206 217 28 19 chr2 129234339 129234445 -124022138 + GA-rich Low_complexity Low_complexity 4 110 0 573 217 0 0 chr2 129234497 129234672 -124021911 + (TG)n Simple_repeat Simple_repeat 2 176 0 1565 234 23 3 chr2 129235114 129235468 -124021115 + MLT1A1 LTR MaLR 3 363 -2 186 43 0 0 chr2 129237967 129237990 -124018593 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 184 308 19 0 chr2 129238006 129238058 -124018525 - MER5A DNA MER1_type -136 53 1 341 312 106 12 chr2 129238457 129238627 -124017956 + MIR SINE MIR 10 195 -67 2041 118 4 0 chr2 129238732 129239044 -124017539 + AluSx SINE Alu 2 314 0 639 310 139 25 chr2 129239601 129239793 -124016790 - L2 LINE L2 0 3313 3144 2216 128 0 0 chr2 129239793 129240089 -124016494 + AluSg SINE Alu 1 296 -14 639 310 139 25 chr2 129240089 129240570 -124016013 - L2 LINE L2 -169 3144 2577 608 265 41 20 chr2 129240566 129240762 -124015821 + MIR SINE MIR 63 262 0 * 258 266 0 53 chr2 129240896 129240990 -124015593 - MLT1I LTR MaLR 0 409 321 2173 120 7 0 chr2 129241234 129241543 -124015040 + AluSx SINE Alu 2 312 0 237 280 40 0 chr2 129242849 129242974 -124013609 + (TA)n Simple_repeat Simple_repeat 1 130 0 312 265 33 55 chr2 129243624 129243805 -124012778 - MLT1H LTR MaLR -281 268 92 279 54 0 0 chr2 129245366 129245398 -124011185 + (CA)n Simple_repeat Simple_repeat 1 69 0 279 54 0 0 chr2 129245398 129245435 -124011148 + (CA)n Simple_repeat Simple_repeat 2 38 0 294 391 41 0 chr2 129246074 129246271 -124010312 + LTR67 LTR ERVL 29 233 -324 455 271 52 103 chr2 129246676 129246862 -124009721 + L2 LINE L2 2943 3100 -213 1985 151 39 20 chr2 129246862 129247219 -124009364 + THE1B LTR MaLR 1 364 0 455 271 52 103 chr2 129247219 129247419 -124009164 + L2 LINE L2 3100 3309 -4 22 56 0 0 chr2 129249547 129249583 -124007000 + AT_rich Low_complexity Low_complexity 1 36 0 319 311 0 30 chr2 129249766 129249901 -124006682 + GA-rich Low_complexity Low_complexity 4 134 0 2051 119 0 58 chr2 129250391 129250719 -124005864 - AluSc SINE Alu 0 309 1 249 281 0 34 chr2 129251025 129251114 -124005469 - MIR SINE MIR -147 115 30 427 122 12 12 chr2 129252116 129252198 -124004385 + (TTCC)n Simple_repeat Simple_repeat 1 82 0 1874 141 30 0 chr2 129252198 129252495 -124004088 - AluSg SINE Alu -3 307 2 217 317 79 10 chr2 129253312 129253413 -124003170 - L2 LINE L2 -18 3254 3147 396 120 0 130 chr2 129253434 129253486 -124003097 - MADE1 DNA Mariner 0 80 43 2416 96 0 0 chr2 129253486 129253788 -124002795 + AluSc SINE Alu 1 302 -7 396 120 0 130 chr2 129253788 129253827 -124002756 - MADE1 DNA Mariner -37 43 1 22 0 0 0 chr2 129254035 129254057 -124002526 + AT_rich Low_complexity Low_complexity 1 22 0 386 313 109 10 chr2 129254630 129254822 -124001761 - MIR SINE MIR -42 220 10 597 203 16 16 chr2 129255006 129255134 -124001449 - FLAM_A SINE Alu -3 130 3 652 231 17 6 chr2 129256348 129256521 -124000062 - L1MA7 LINE L1 -385 5906 5732 643 157 0 0 chr2 129256521 129256636 -123999947 + L1MA7 LINE L1 6170 6284 -7 24 0 0 0 chr2 129257037 129257061 -123999522 + AT_rich Low_complexity Low_complexity 1 24 0 838 217 12 12 chr2 129257468 129257634 -123998949 - FRAM SINE Alu 0 166 1 207 286 0 16 chr2 129258519 129258582 -123998001 + MIR SINE MIR 157 218 -44 233 305 114 57 chr2 129258679 129258784 -123997799 + MIR SINE MIR 55 165 -97 5111 103 13 5 chr2 129258977 129259724 -123996859 + L1PA11 LINE L1 5420 6172 -2 385 315 55 28 chr2 129260301 129260482 -123996101 + MIR SINE MIR 12 197 -65 204 340 68 64 chr2 129260649 129261196 -123995387 - L2 LINE L2 -482 2832 2284 195 69 0 0 chr2 129261218 129261247 -123995336 + (TG)n Simple_repeat Simple_repeat 2 30 0 314 333 57 10 chr2 129261319 129261511 -123995072 - L2 LINE L2 -1403 1911 1711 466 82 51 0 chr2 129262117 129262215 -123994368 + (TA)n Simple_repeat Simple_repeat 2 104 0 318 224 78 115 chr2 129262534 129262726 -123993857 - L3 LINE CR1 -492 1085 901 198 0 0 0 chr2 129262726 129262748 -123993835 + (T)n Simple_repeat Simple_repeat 1 22 0 387 356 74 5 chr2 129263579 129263797 -123992786 - MIR SINE MIR -13 249 21 22 35 0 0 chr2 129264203 129264232 -123992351 + AT_rich Low_complexity Low_complexity 1 29 0 231 147 0 0 chr2 129264453 129264487 -123992096 + Charlie8 DNA MER1_type 1388 1421 -996 199 306 71 24 chr2 129265208 129265293 -123991290 - MIR SINE MIR -86 122 34 * 422 286 85 27 chr2 129265290 129265514 -123991069 - MIR SINE MIR -8 254 18 425 198 52 10 chr2 129265580 129265676 -123990907 + MIR SINE MIR 83 182 -80 184 291 228 24 chr2 129266979 129267106 -123989477 + MIR3 SINE MIR 53 205 -3 303 254 56 23 chr2 129267414 129267579 -123989004 - MER97a DNA MER1_type? 0 894 801 473 296 25 0 chr2 129268089 129268248 -123988335 + MER97a DNA MER1_type? 397 559 -335 603 225 29 157 chr2 129268268 129268464 -123988119 - MER97a DNA MER1_type? -659 235 251 2082 134 0 19 chr2 129268464 129268778 -123987805 + AluSq SINE Alu 6 313 0 603 225 29 157 chr2 129268778 129268995 -123987588 - MER97a DNA MER1_type? -642 252 9 21 36 0 0 chr2 129269759 129269787 -123986796 + AT_rich Low_complexity Low_complexity 1 28 0 232 290 130 30 chr2 129270295 129270426 -123986157 + MIR SINE MIR 2 145 -117 280 273 67 80 chr2 129270454 129270692 -123985891 - MLT1K LTR MaLR -16 572 338 408 88 0 0 chr2 129271049 129271106 -123985477 + (TG)n Simple_repeat Simple_repeat 2 58 0 234 302 45 86 chr2 129271286 129271508 -123985075 - MIR SINE MIR -15 247 35 202 344 0 0 chr2 129271730 129271794 -123984789 - MIR3 SINE MIR -46 162 99 191 304 0 0 chr2 129272121 129272167 -123984416 + L2 LINE L2 3186 3231 -41 549 315 76 17 chr2 129272532 129272770 -123983813 + MIR SINE MIR 11 262 0 24 32 0 0 chr2 129272848 129272879 -123983704 + AT_rich Low_complexity Low_complexity 1 31 0 274 263 192 0 chr2 129272985 129273084 -123983499 - L2 LINE L2 -25 3288 3171 539 296 101 20 chr2 129273575 129273805 -123982778 - MIR SINE MIR 0 262 16 564 251 66 22 chr2 129274213 129274396 -123982187 + MIR SINE MIR 44 234 -28 790 167 17 6 chr2 129274462 129274636 -123981947 + (CACCAT)n Simple_repeat Simple_repeat 4 179 0 729 208 0 0 chr2 129274665 129274843 -123981740 + (CCA)n Simple_repeat Simple_repeat 1 178 0 296 162 0 29 chr2 129274858 129274926 -123981657 + (CCA)n Simple_repeat Simple_repeat 1 66 0 224 300 44 11 chr2 129275042 129275132 -123981451 + MIR SINE MIR 41 133 -75 186 400 0 0 chr2 129276433 129276508 -123980075 - L2 LINE L2 -5 3267 3193 366 23 0 0 chr2 129276627 129276670 -123979913 + (TG)n Simple_repeat Simple_repeat 1 43 0 216 0 0 0 chr2 129276669 129276693 -123979890 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 27 0 0 0 chr2 129277272 129277299 -123979284 + AT_rich Low_complexity Low_complexity 1 27 0 1502 178 0 30 chr2 129280108 129280372 -123976211 - AluSx SINE Alu -24 288 33 441 0 0 0 chr2 129280497 129280546 -123976037 + (TG)n Simple_repeat Simple_repeat 2 50 0 964 286 59 12 chr2 129281790 129282196 -123974387 + LTR16A LTR ERVL 21 445 -5 210 244 0 0 chr2 129282224 129282265 -123974318 + (CA)n Simple_repeat Simple_repeat 2 42 0 307 295 11 0 chr2 129282776 129282871 -123973712 + MIR SINE MIR 61 156 -106 215 310 103 9 chr2 129283861 129283977 -123972606 - L2 LINE L2 -4 3268 3142 1285 266 156 9 chr2 129285405 129285955 -123970628 + L1ME3A LINE L1 5504 6134 -36 212 191 21 0 chr2 129286867 129286914 -123969669 + GA-rich Low_complexity Low_complexity 3 50 0 282 95 0 0 chr2 129287763 129287805 -123968778 + (A)n Simple_repeat Simple_repeat 1 42 0 641 236 70 42 chr2 129287919 129288160 -123968423 - MER102b DNA MER1_type -10 331 84 1541 167 3 87 chr2 129288675 129288998 -123967585 + AluJo SINE Alu 1 296 -16 1124 104 12 0 chr2 129289009 129289032 -123967551 + (GAAA)n Simple_repeat Simple_repeat 1 198 0 1124 104 12 0 chr2 129289032 129289205 -123967378 + (GAAA)n Simple_repeat Simple_repeat 3 177 0 1626 154 23 99 chr2 129291294 129291654 -123964929 - AluYb8 SINE Alu 0 334 1 274 292 157 39 chr2 129291657 129291835 -123964748 - MIR SINE MIR -62 200 2 1910 134 15 15 chr2 129292114 129292449 -123964134 - L1PA13 LINE L1 0 6163 5829 21 0 0 0 chr2 129292491 129292512 -123964071 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 129293735 129293757 -123962826 + AT_rich Low_complexity Low_complexity 1 22 0 186 43 0 0 chr2 129294411 129294434 -123962149 + (T)n Simple_repeat Simple_repeat 1 23 0 185 256 0 0 chr2 129295062 129295101 -123961482 - MIR SINE MIR -83 125 87 3741 216 32 19 chr2 129295242 129296488 -123960095 - L1MB7 LINE L1 -17 6167 4904 34 79 0 0 chr2 129296566 129296642 -123959941 + AT_rich Low_complexity Low_complexity 1 76 0 244 377 38 25 chr2 129296927 129297166 -123959417 + MIR SINE MIR 21 262 0 746 251 74 20 chr2 129297357 129297707 -123958876 - L1MC5 LINE L1 -25 7936 7568 284 44 44 0 chr2 129298215 129298260 -123958323 + (TTTTG)n Simple_repeat Simple_repeat 3 49 0 1965 140 4 0 chr2 129298260 129298539 -123958044 - AluSx SINE Alu -32 280 1 22 0 0 0 chr2 129298847 129298869 -123957714 + AT_rich Low_complexity Low_complexity 1 22 0 401 309 86 19 chr2 129299778 129299988 -123956595 - MIR SINE MIR -32 230 7 322 341 30 18 chr2 129300578 129300742 -123955841 + MIR SINE MIR 74 239 -23 30 0 0 0 chr2 129301762 129301792 -123954791 + AT_rich Low_complexity Low_complexity 1 30 0 190 310 70 50 chr2 129302779 129302879 -123953704 - MIR SINE MIR -76 132 31 210 71 0 0 chr2 129303085 129303113 -123953470 + (CA)n Simple_repeat Simple_repeat 1 28 0 312 270 275 34 chr2 129303123 129303301 -123953282 - MIR SINE MIR -28 234 14 843 48 0 0 chr2 129303567 129303670 -123952913 - MER4E LTR ERV1 -48 718 616 606 352 89 9 chr2 129303988 129304326 -123952257 + L3 LINE CR1 1210 1574 -3 188 372 0 64 chr2 129304788 129304882 -123951701 + L2 LINE L2 3031 3118 -154 342 383 24 62 chr2 129305456 129305565 -123951018 - L2 LINE L2 -8 3264 3152 2272 69 38 0 chr2 129305565 129305853 -123950730 + AluY SINE Alu 1 299 -12 342 383 24 62 chr2 129305853 129306033 -123950550 - L2 LINE L2 -120 3152 2986 925 207 23 65 chr2 129307212 129307531 -123949052 + MLT1A2 LTR MaLR 60 384 -6 1316 188 58 78 chr2 129308374 129308772 -123947811 - MLT1B LTR MaLR 0 390 1 183 250 29 58 chr2 129309440 129309544 -123947039 + MIR SINE MIR 115 215 -47 21 36 0 0 chr2 129309628 129309656 -123946927 + AT_rich Low_complexity Low_complexity 1 28 0 734 288 14 14 chr2 129310150 129310362 -123946221 - MIR SINE MIR -2 260 49 1852 137 60 0 chr2 129311047 129311331 -123945252 + AluSg SINE Alu 1 301 -9 324 297 65 67 chr2 129311579 129312101 -123944482 + HAL1 LINE L1 502 1022 -1485 360 0 0 0 chr2 129312104 129312144 -123944439 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 814 179 14 0 chr2 129312146 129312291 -123944292 - FRAM SINE Alu -30 146 1 624 270 238 27 chr2 129312293 129312862 -123943721 + HAL1 LINE L1 1018 1764 -743 671 266 181 44 chr2 129312862 129313336 -123943247 - MLT1F LTR MaLR -3 539 1 624 270 238 27 chr2 129313336 129313467 -123943116 + HAL1 LINE L1 1764 1866 -641 562 252 55 64 chr2 129313472 129313690 -123942893 + MER20 DNA MER1_type 1 216 -3 327 256 160 18 chr2 129313904 129314123 -123942460 + HAL1 LINE L1 2253 2502 -5 180 77 0 0 chr2 129314320 129314346 -123942237 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 2100 114 0 3 chr2 129314378 129314668 -123941915 + AluSq SINE Alu 1 289 -24 37 0 0 0 chr2 129314668 129314705 -123941878 + AT_rich Low_complexity Low_complexity 1 37 0 465 75 93 0 chr2 129314705 129314866 -123941717 + (TA)n Simple_repeat Simple_repeat 1 176 0 2900 148 22 25 chr2 129315019 129315638 -123940945 + MER4B LTR ERV1 1 779 0 2436 84 0 3 chr2 129315758 129316067 -123940516 - AluY SINE Alu -3 308 1 210 71 0 0 chr2 129316069 129316097 -123940486 + (T)n Simple_repeat Simple_repeat 1 28 0 306 327 62 98 chr2 129316113 129317074 -123939509 + L2 LINE L2 2174 3091 -181 207 100 0 0 chr2 129318395 129318425 -123938158 + (TTTTC)n Simple_repeat Simple_repeat 1 30 0 1366 269 58 68 chr2 129318816 129319164 -123937419 - MLT1E LTR MaLR 0 593 252 2339 118 0 0 chr2 129319164 129319469 -123937114 - AluSq SINE Alu -8 305 1 1366 269 58 68 chr2 129319469 129319719 -123936864 - MLT1E LTR MaLR -341 252 1 531 246 94 8 chr2 129319767 129320011 -123936572 + L1ME3A LINE L1 5803 6067 -103 297 289 41 0 chr2 129320142 129320239 -123936344 + MIR3 SINE MIR 82 182 -26 181 299 30 15 chr2 129320363 129320430 -123936153 + MIR SINE MIR 62 129 -133 400 283 35 14 chr2 129320517 129320662 -123935921 + MER97a DNA MER1_type? 14 161 -733 1049 180 4 62 chr2 129320989 129321233 -123935350 + AluJo SINE Alu 61 290 -22 213 280 50 60 chr2 129321274 129321492 -123935091 + L2 LINE L2 2523 2738 -576 377 280 120 106 chr2 129321572 129321997 -123934586 + L2 LINE L2 2881 3311 -2 287 318 34 84 chr2 129323452 129323691 -123932892 - MLT1I LTR MaLR -26 383 157 802 274 0 27 chr2 129324055 129324241 -123932342 - MER5A DNA MER1_type -8 181 1 860 243 6 0 chr2 129324403 129324584 -123931999 + MER5A DNA MER1_type 2 183 -6 235 267 0 0 chr2 129324658 129324703 -123931880 + MER5A DNA MER1_type 55 99 -90 255 317 0 20 chr2 129326329 129326430 -123930153 + MIR SINE MIR 41 139 -69 2219 121 3 0 chr2 129326603 129326909 -123929674 - AluSq SINE Alu -6 307 1 634 213 11 86 chr2 129329249 129329423 -123927160 + MER5A DNA MER1_type 1 161 -28 1673 217 0 10 chr2 129329602 129329915 -123926668 - AluJb SINE Alu -2 310 1 2260 121 0 0 chr2 129330891 129331197 -123925386 + AluY SINE Alu 1 306 -5 306 0 0 0 chr2 129331427 129331461 -123925122 + (A)n Simple_repeat Simple_repeat 1 34 0 22 56 0 0 chr2 129331470 129331506 -123925077 + AT_rich Low_complexity Low_complexity 1 36 0 26 30 0 0 chr2 129331547 129331580 -123925003 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr2 129332222 129332252 -123924331 + GC_rich Low_complexity Low_complexity 1 30 0 2692 158 70 0 chr2 129332529 129333043 -123923540 - LTR64 LTR ERVK -8 550 1 394 250 73 66 chr2 129333485 129333757 -123922826 - LOR1-int LTR ERV1 -1729 3207 2990 440 197 51 39 chr2 129333906 129334062 -123922521 - LOR1-int LTR ERV1 -1867 4178 3925 * 1023 178 42 23 chr2 129334060 129334319 -123922264 - LOR1-int LTR ERV1 -2605 3993 3730 880 148 10 45 chr2 129334399 129334601 -123921982 - LOR1-int LTR ERV1 -2868 3730 3536 4403 177 43 57 chr2 129334684 129336232 -123920351 - LOR1-int LTR ERV1 -4280 2478 790 * 4412 187 39 56 chr2 129335456 129336662 -123919921 - LTR57-int LTR ERVL -3747 1596 412 1725 199 10 0 chr2 129336672 129336979 -123919604 - AluJb SINE Alu 0 312 3 2785 167 40 15 chr2 129337245 129337789 -123918794 - LTR64 LTR ERVK 0 558 1 322 301 147 0 chr2 129337854 129337997 -123918586 - MIR SINE MIR -87 175 12 180 0 0 0 chr2 129338565 129338585 -123917998 + (TA)n Simple_repeat Simple_repeat 1 20 0 394 275 58 0 chr2 129338699 129338837 -123917746 + MIR SINE MIR 85 230 -32 268 257 147 0 chr2 129339479 129339588 -123916995 - MIR SINE MIR -57 205 81 372 141 13 39 chr2 129341540 129341618 -123914965 - L1MB8 LINE L1 -15 6163 6088 685 230 161 24 chr2 129341618 129341909 -123914674 - L1ME3A LINE L1 -228 5942 5612 347 327 89 28 chr2 129342455 129342669 -123913914 - MIR SINE MIR 0 262 36 338 315 117 35 chr2 129343170 129343427 -123913156 - L2 LINE L2 -16 3297 3020 260 109 0 22 chr2 129343735 129343781 -123912802 + (TC)n Simple_repeat Simple_repeat 1 45 0 234 316 124 48 chr2 129345855 129346064 -123910519 + L2 LINE L2 3041 3265 -7 7484 40 0 0 chr2 129347099 129348223 -123908360 + L1PA5 LINE L1 5027 6150 -4 2352 85 3 0 chr2 129348225 129348518 -123908065 + AluY SINE Alu 1 294 -17 1317 73 0 0 chr2 129348554 129348732 -123907851 + (TTCC)n Simple_repeat Simple_repeat 1 178 0 188 194 28 0 chr2 129348761 129348797 -123907786 - MIR SINE MIR -8 254 218 * 282 339 142 48 chr2 129348765 129349054 -123907529 - L2 LINE L2 -19 3253 2938 1741 148 48 0 chr2 129349450 129349572 -123907011 + AluSx SINE Alu 1 116 -198 195 69 0 0 chr2 129349572 129349601 -123906982 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 1741 148 48 0 chr2 129349601 129349779 -123906804 + AluSx SINE Alu 116 314 0 2256 108 0 0 chr2 129349947 129350273 -123906310 - AluSx SINE Alu 0 326 1 1590 120 22 7 chr2 129352380 129352656 -123903927 - L1MA5A LINE L1 0 6297 6018 285 51 0 0 chr2 129352688 129352727 -123903856 + (TC)n Simple_repeat Simple_repeat 2 40 0 234 0 0 0 chr2 129352733 129352759 -123903824 + (CA)n Simple_repeat Simple_repeat 1 26 0 305 239 43 0 chr2 129352812 129352904 -123903679 + MER112 DNA MER1_type 157 252 -8 201 39 0 0 chr2 129353251 129353277 -123903306 + (TC)n Simple_repeat Simple_repeat 2 27 0 473 208 120 141 chr2 129353745 129353823 -123902760 + MER5A DNA MER1_type 2 80 -109 2117 130 7 7 chr2 129353823 129354130 -123902453 + AluSg SINE Alu 1 307 -3 473 208 120 141 chr2 129354130 129354141 -123902442 + MER5A DNA MER1_type 80 90 -99 2037 128 16 3 chr2 129354141 129354445 -123902138 + AluSg SINE Alu 1 308 -2 473 208 120 141 chr2 129354445 129354546 -123902037 + MER5A DNA MER1_type 90 189 0 260 341 50 42 chr2 129354546 129354899 -123901684 - L2 LINE L2 -109 3163 2808 2579 276 113 71 chr2 129354902 129356852 -123899731 + L2 LINE L2 1214 3218 -95 24 77 0 0 chr2 129358167 129358219 -123898364 + AT_rich Low_complexity Low_complexity 1 52 0 355 322 20 14 chr2 129358287 129358632 -123897951 - L1MEd LINE L1 -3597 2532 2186 183 80 0 0 chr2 129359430 129359455 -123897128 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 269 327 13 7 chr2 129359469 129359559 -123897024 - HAL1 LINE L1 -875 1632 1539 508 307 14 37 chr2 129359559 129359774 -123896809 - MER63A DNA MER1_type 0 210 1 269 327 13 7 chr2 129359774 129359833 -123896750 - HAL1 LINE L1 -968 1539 1482 476 297 107 55 chr2 129360038 129360534 -123896049 - L1MEd LINE L1 -4905 1214 668 432 82 0 0 chr2 129360534 129360595 -123895988 + (TG)n Simple_repeat Simple_repeat 2 62 0 476 297 107 55 chr2 129360595 129360819 -123895764 - L1MEd LINE L1 -5451 668 457 2593 146 26 0 chr2 129361157 129361574 -123895009 - MSTA LTR MaLR 0 428 1 207 0 0 0 chr2 129362189 129362212 -123894371 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 340 286 108 61 chr2 129363572 129363803 -123892780 + MIR SINE MIR 11 252 -10 183 129 0 0 chr2 129363862 129363893 -123892690 + (T)n Simple_repeat Simple_repeat 1 31 0 361 334 40 67 chr2 129364038 129364562 -123892021 - MLT1K LTR MaLR -42 546 37 495 293 87 29 chr2 129366037 129366245 -123890338 - MIR SINE MIR -25 237 18 385 356 83 5 chr2 129366401 129366606 -123889977 + MIR SINE MIR 27 247 -15 2052 128 47 0 chr2 129366850 129367146 -123889437 - AluSx SINE Alu -2 310 1 461 311 73 10 chr2 129367652 129367850 -123888733 + MIR SINE MIR 9 214 -48 324 333 0 0 chr2 129370139 129370238 -123886345 + MER81 DNA DNA 1 99 -15 1837 150 40 11 chr2 129370867 129371214 -123885369 - THE1B LTR MaLR -7 357 1 1522 216 30 0 chr2 129371228 129371524 -123885059 - AluJb SINE Alu -7 305 1 369 306 0 54 chr2 129371751 129371937 -123884646 + (TATATG)n Simple_repeat Simple_repeat 1 176 0 398 268 11 45 chr2 129371986 129372165 -123884418 + (TATATG)n Simple_repeat Simple_repeat 4 176 0 224 274 6 23 chr2 129372176 129372351 -123884232 + (TATG)n Simple_repeat Simple_repeat 3 174 0 402 371 0 0 chr2 129372378 129372553 -123884030 + (TG)n Simple_repeat Simple_repeat 2 176 0 362 278 173 16 chr2 129372578 129372833 -123883750 - HAL1 LINE L1 -1581 926 632 1052 261 2 50 chr2 129373164 129373562 -123883021 - MLT2C1 LTR ERVL -2 395 17 2081 200 50 19 chr2 129373600 129373712 -123882871 - L1MB5 LINE L1 -11 6163 6056 360 0 0 0 chr2 129373712 129373752 -123882831 + (CA)n Simple_repeat Simple_repeat 1 40 0 2081 200 50 19 chr2 129373752 129374163 -123882420 - L1MB5 LINE L1 -118 6056 5624 314 331 25 16 chr2 129374521 129374642 -123881941 + MIR3 SINE MIR 85 206 -2 368 273 29 58 chr2 129375633 129375772 -123880811 + MIR SINE MIR 112 246 -16 5015 140 28 16 chr2 129376110 129377241 -123879342 - L1PA16 LINE L1 0 6166 5014 2073 119 29 29 chr2 129377241 129377553 -123879030 - AluSx SINE Alu 0 312 1 5015 140 28 16 chr2 129377553 129377673 -123878910 - L1PA16 LINE L1 -1152 5014 4897 968 303 95 5 chr2 129378300 129378743 -123877840 + LTR16C LTR ERVL 3 485 -6 291 268 0 31 chr2 129379080 129379177 -123877406 - MIR SINE MIR -10 252 159 911 278 45 32 chr2 129379178 129379658 -123876925 - MLT1H1 LTR MaLR -10 545 5 351 279 153 0 chr2 129379663 129379774 -123876809 - MIR SINE MIR -100 162 35 438 318 85 36 chr2 129379983 129380373 -123876210 + MLT1J LTR MaLR 100 508 -3 383 288 34 0 chr2 129381313 129381431 -123875152 + MIR SINE MIR 33 154 -108 471 254 79 0 chr2 129381510 129381636 -123874947 - Tigger6 DNA MER2_type 0 1597 1462 1755 206 3 0 chr2 129382702 129383013 -123873570 - AluJb SINE Alu 0 312 1 340 314 54 71 chr2 129383440 129383506 -123873077 - L2 LINE L2 0 3313 3247 1550 214 7 3 chr2 129383506 129383800 -123872783 + AluJb SINE Alu 3 297 -15 340 314 54 71 chr2 129383800 129384125 -123872458 - L2 LINE L2 -66 3247 2929 204 360 0 23 chr2 129384518 129384604 -123871979 - L2 LINE L2 -4 3268 3185 2118 132 7 0 chr2 129384695 129384999 -123871584 - AluSq SINE Alu -7 306 1 340 326 83 39 chr2 129385229 129385410 -123871173 + MER5A DNA MER1_type 1 189 0 447 19 0 0 chr2 129386097 129386149 -123870434 + (TG)n Simple_repeat Simple_repeat 2 53 0 1028 130 52 78 chr2 129387050 129387320 -123869263 + L1MA8 LINE L1 6003 6265 -26 225 269 64 0 chr2 129387383 129387461 -123869122 - MIR SINE MIR -62 200 118 240 341 134 0 chr2 129388204 129388286 -123868297 + MIR SINE MIR 47 139 -123 1274 242 19 68 chr2 129389365 129389877 -123866706 + MLT1D LTR MaLR 2 488 -17 2666 175 38 49 chr2 129391660 129391932 -123864651 - L1MA9 LINE L1 -1 6311 6038 2172 134 0 0 chr2 129391932 129392239 -123864344 + AluSx SINE Alu 1 307 -5 2666 175 38 49 chr2 129392239 129392601 -123863982 - L1MA9 LINE L1 -274 6038 5684 2381 193 26 94 chr2 129392600 129393607 -123862976 + L1MA9 LINE L1 4705 5674 -638 * 2274 229 21 33 chr2 129393708 129394280 -123862303 - MER74B LTR ERVL 0 622 58 295 185 25 6 chr2 129395643 129395800 -123860783 + (TA)n Simple_repeat Simple_repeat 2 161 0 2299 104 3 13 chr2 129396251 129396567 -123860016 + AluSp SINE Alu 1 313 0 718 229 96 0 chr2 129396633 129396790 -123859793 + Tigger3(Golem) DNA MER2_type 1 172 -2857 4624 164 34 15 chr2 129396793 129397665 -123858918 + Tigger3(Golem) DNA MER2_type 2141 3029 0 198 224 0 0 chr2 129397781 129397830 -123858753 + CT-rich Low_complexity Low_complexity 84 132 0 288 0 0 0 chr2 129397992 129398024 -123858559 + (TA)n Simple_repeat Simple_repeat 2 33 0 3083 99 57 17 chr2 129398347 129398821 -123857762 - L1PB1 LINE L1 0 6151 5659 9481 203 24 10 chr2 129398837 129401403 -123855180 - L1P5 LINE L1 -379 6488 3874 186 103 0 0 chr2 129401403 129401432 -123855151 + (TTG)n Simple_repeat Simple_repeat 2 30 0 9481 203 24 10 chr2 129401432 129401693 -123854890 - L1P5 LINE L1 -2993 3874 3618 4574 152 27 6 chr2 129401688 129403014 -123853569 - L1P5 LINE L1 -4745 2118 621 * 1124 157 5 0 chr2 129403002 129403199 -123853384 - L1P5 LINE L1 -6663 200 3 * 25 0 0 0 chr2 129403379 129403404 -123853179 + AT_rich Low_complexity Low_complexity 1 25 0 3930 198 44 34 chr2 129403435 129405157 -123851426 - L1MA9 LINE L1 -19 6293 4468 22 56 0 0 chr2 129405296 129405332 -123851251 + AT_rich Low_complexity Low_complexity 1 36 0 734 239 42 97 chr2 129405680 129406011 -123850572 + MLT1C LTR MaLR 75 387 -80 1044 295 81 24 chr2 129406042 129406500 -123850083 - L2 LINE L2 -1094 2220 1737 2234 119 3 0 chr2 129406518 129406828 -123849755 + AluSx SINE Alu 1 311 -1 27 29 0 0 chr2 129407151 129407185 -123849398 + AT_rich Low_complexity Low_complexity 1 34 0 1271 300 138 31 chr2 129407284 129408409 -123848174 - HAL1 LINE L1 -146 2361 1094 8705 122 15 2 chr2 129408409 129409677 -123846906 + HSMAR1 DNA Mariner 1 1285 -2 1271 300 138 31 chr2 129409677 129409771 -123846812 - HAL1 LINE L1 -1413 1094 1011 1203 209 94 26 chr2 129410162 129410322 -123846261 + MLT1B LTR MaLR 5 153 -237 2187 128 0 0 chr2 129410322 129410627 -123845956 + AluSq SINE Alu 2 306 -7 1203 209 94 26 chr2 129410627 129410816 -123845767 + MLT1B LTR MaLR 153 378 -12 255 209 151 70 chr2 129411289 129411375 -123845208 + MER97a DNA MER1_type? 363 455 -439 414 282 0 0 chr2 129411467 129411570 -123845013 + AluSp/q SINE Alu 189 291 -12 435 211 154 17 chr2 129411599 129411774 -123844809 + MER97a DNA MER1_type? 529 727 -167 22 35 0 0 chr2 129411917 129411946 -123844637 + AT_rich Low_complexity Low_complexity 1 29 0 26 30 0 0 chr2 129412590 129412623 -123843960 + AT_rich Low_complexity Low_complexity 1 33 0 24 67 0 0 chr2 129412801 129412846 -123843737 + AT_rich Low_complexity Low_complexity 1 45 0 281 294 8 87 chr2 129413187 129413313 -123843270 - L2 LINE L2 -24 3289 3174 1524 146 66 4 chr2 129413357 129413631 -123842952 + MSTA LTR MaLR 8 298 -130 272 300 73 36 chr2 129413632 129413742 -123842841 - L2 LINE L2 -14 3299 3186 181 341 104 0 chr2 129413801 129413936 -123842647 - MIR SINE MIR -9 253 105 431 275 123 55 chr2 129414488 129414797 -123841786 + MLT1K LTR MaLR 257 586 -2 242 0 61 0 chr2 129415549 129415582 -123841001 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 21 36 0 0 chr2 129415807 129415835 -123840748 + AT_rich Low_complexity Low_complexity 1 28 0 1478 117 36 5 chr2 129415909 129416132 -123840451 + MER30 DNA MER1_type 1 230 0 1909 259 88 19 chr2 129416330 129417178 -123839405 - L1ME2 LINE L1 -10 6154 5235 405 0 0 0 chr2 129417178 129417223 -123839360 + (TG)n Simple_repeat Simple_repeat 2 46 0 1909 259 88 19 chr2 129417223 129417260 -123839323 - L1ME2 LINE L1 -929 5235 5202 194 319 14 14 chr2 129417645 129417714 -123838869 - L2 LINE L2 -232 3081 3013 188 330 48 19 chr2 129417740 129417843 -123838740 - MIR SINE MIR -11 251 146 213 214 0 0 chr2 129418050 129418092 -123838491 + GA-rich Low_complexity Low_complexity 1 42 0 1296 254 7 78 chr2 129418092 129418156 -123838427 + MLT2D LTR ERVL 8 75 -339 2252 78 6 40 chr2 129418156 129418477 -123838106 - AluY SINE Alu -1 310 1 1296 254 7 78 chr2 129418477 129418745 -123837838 + MLT2D LTR ERVL 75 306 -108 1709 43 0 0 chr2 129418745 129418955 -123837628 - L1PA5 LINE L1 0 6154 5945 1296 254 7 78 chr2 129418955 129419047 -123837536 + MLT2D LTR ERVL 306 403 -11 455 95 27 0 chr2 129419069 129419143 -123837440 + MADE1 DNA Mariner 1 76 -4 208 219 0 0 chr2 129419156 129419197 -123837386 + (TG)n Simple_repeat Simple_repeat 2 42 0 761 293 153 48 chr2 129419485 129420192 -123836391 + HAL1 LINE L1 132 912 -1595 888 282 103 71 chr2 129420384 129421636 -123834947 + HAL1 LINE L1 1130 2421 -86 243 146 0 0 chr2 129422391 129422432 -123834151 + (CA)n Simple_repeat Simple_repeat 1 41 0 238 259 0 17 chr2 129422449 129422507 -123834076 - AluSp SINE Alu -118 185 129 310 362 31 26 chr2 129422525 129422754 -123833829 + L2 LINE L2 2674 2903 -411 21 57 0 0 chr2 129423592 129423627 -123832956 + AT_rich Low_complexity Low_complexity 1 35 0 5435 235 51 89 chr2 129423752 129425091 -123831492 + L1MC/D LINE L1 2576 3964 -2369 219 36 0 0 chr2 129425091 129425119 -123831464 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 5435 235 51 89 chr2 129425119 129425405 -123831178 + L1MC/D LINE L1 3964 4259 -2074 400 197 26 17 chr2 129425405 129425515 -123831068 + L1MA7 LINE L1 6167 6284 -7 5435 235 51 89 chr2 129425515 129426843 -123829740 + L1MC/D LINE L1 4259 5378 -955 1550 207 7 20 chr2 129426843 129427148 -123829435 + AluJo SINE Alu 1 301 -11 5435 235 51 89 chr2 129427148 129427559 -123829024 + L1MC/D LINE L1 5378 5803 -530 2371 175 19 27 chr2 129427552 129427833 -123828750 - L1MB3 LINE L1 -239 5944 5667 * 2332 92 0 0 chr2 129427833 129428125 -123828458 + AluSg SINE Alu 1 292 -18 2371 175 19 27 chr2 129428125 129428324 -123828259 - L1MB3 LINE L1 -516 5667 5468 1742 222 22 19 chr2 129428300 129429065 -123827518 + L1M3 LINE L1 4845 5613 -567 * 891 264 35 0 chr2 129429060 129429321 -123827262 + L1MD1 LINE L1 4049 4318 -1828 * 1350 254 42 22 chr2 129429341 129429919 -123826664 + L1MD1 LINE L1 4233 4821 -1325 3251 182 50 35 chr2 129429950 129430703 -123825880 + LTR1B LTR ERV1 1 785 0 3789 208 69 23 chr2 129430703 129431644 -123824939 + L1MD1 LINE L1 4850 5861 -381 1942 85 39 0 chr2 129431644 129431817 -123824766 - AluY SINE Alu -7 304 116 513 0 0 0 chr2 129431817 129431874 -123824709 + (TG)n Simple_repeat Simple_repeat 2 58 0 1942 85 39 0 chr2 129431874 129431960 -123824623 - AluY SINE Alu -195 116 35 3789 208 69 23 chr2 129431960 129432352 -123824231 + L1MD1 LINE L1 5861 6234 -8 1154 219 28 94 chr2 129432482 129432906 -123823677 - L1MB3 LINE L1 -948 5198 4803 36 23 0 0 chr2 129432984 129433027 -123823556 + AT_rich Low_complexity Low_complexity 1 43 0 492 292 110 95 chr2 129433101 129433179 -123823404 - L1MEd LINE L1 -4869 1250 1175 1674 195 13 3 chr2 129433179 129433482 -123823101 - AluJb SINE Alu -6 306 1 492 292 110 95 chr2 129433482 129433948 -123822635 - L1MEd LINE L1 -4944 1175 698 269 278 103 0 chr2 129434236 129434333 -123822250 - L1MEd LINE L1 -5785 334 228 21 0 0 0 chr2 129435313 129435334 -123821249 + AT_rich Low_complexity Low_complexity 1 21 0 232 345 62 0 chr2 129435737 129435850 -123820733 - MIR SINE MIR -59 203 84 207 0 0 0 chr2 129435943 129435966 -123820617 + (T)n Simple_repeat Simple_repeat 1 23 0 234 0 0 0 chr2 129436169 129436195 -123820388 + (TA)n Simple_repeat Simple_repeat 2 27 0 450 269 37 0 chr2 129436674 129436808 -123819775 - MIR SINE MIR 0 262 124 268 330 43 49 chr2 129436900 129437085 -123819498 + MIR SINE MIR 8 191 -71 191 324 102 28 chr2 129437172 129437280 -123819303 - MIR SINE MIR -101 161 46 279 296 25 0 chr2 129438682 129438763 -123817820 - L2 LINE L2 -5 3267 3185 204 217 0 0 chr2 129441468 129441514 -123815069 + (TA)n Simple_repeat Simple_repeat 2 47 0 243 173 0 0 chr2 129441514 129441566 -123815017 - L1MC4 LINE L1 -1339 6703 6652 276 342 103 0 chr2 129444028 129444145 -123812438 - L2 LINE L2 -5 3267 3139 276 286 194 0 chr2 129447001 129447099 -123809484 - MER58A DNA MER1_type 0 118 2 673 332 83 53 chr2 129448079 129448968 -123807615 - L2 LINE L2 -569 2745 1830 219 306 0 0 chr2 129449414 129449463 -123807120 + MIR SINE MIR 55 103 -105 1997 156 0 10 chr2 129449614 129449922 -123806661 - AluSx SINE Alu -7 305 1 418 97 0 0 chr2 129450035 129450097 -123806486 + MLT1E1 LTR MaLR 593 654 0 305 274 11 21 chr2 129450148 129450243 -123806340 + MIR SINE MIR 148 241 -21 1251 187 168 13 chr2 129450529 129450845 -123805738 - MLT1A1 LTR MaLR 0 365 1 401 169 13 6 chr2 129451372 129451458 -123805125 + L1MB3 LINE L1 5919 6000 -174 552 81 0 23 chr2 129451525 129451611 -123804972 + L1MB3 LINE L1 6035 6118 -65 240 171 26 40 chr2 129451653 129451729 -123804854 + L1MB2 LINE L1 6096 6170 -1 249 326 61 38 chr2 129451950 129452082 -123804501 + MIR SINE MIR 13 147 -115 769 188 7 0 chr2 129452887 129453031 -123803552 + FAM SINE Alu 24 168 -17 2201 113 3 28 chr2 129453209 129453528 -123803055 - AluSx SINE Alu -1 311 1 2286 161 41 46 chr2 129454083 129454723 -123801860 + LTR12 LTR ERV1 1 2210 -228 1073 248 83 6 chr2 129455055 129455369 -123801214 - MER58B DNA MER1_type -1 340 3 1966 100 4 21 chr2 129457978 129458258 -123798325 + AluSc SINE Alu 1 275 -34 186 43 0 0 chr2 129458260 129458283 -123798300 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 414 329 13 25 chr2 129458848 129459006 -123797577 + MIR3 SINE MIR 30 185 -23 388 165 127 0 chr2 129459251 129459330 -123797253 + 5S rRNA rRNA 1 89 -32 241 307 79 30 chr2 129459786 129459887 -123796696 - MIR SINE MIR -113 149 44 293 61 0 20 chr2 129460749 129460798 -123795785 + (TTTTTG)n Simple_repeat Simple_repeat 5 52 0 208 327 20 40 chr2 129460798 129460899 -123795684 + MIR3 SINE MIR 105 203 -5 200 392 14 40 chr2 129461203 129461351 -123795232 - MIR3 SINE MIR -55 153 10 809 207 225 44 chr2 129461357 129461439 -123795144 - MER39 LTR ERV1 0 707 641 2289 114 3 0 chr2 129461439 129461738 -123794845 + AluSg SINE Alu 1 300 -10 809 207 225 44 chr2 129461738 129462226 -123794357 - MER39 LTR ERV1 -66 641 1 443 63 16 0 chr2 129462447 129462510 -123794073 + (TAGA)n Simple_repeat Simple_repeat 2 65 0 395 314 105 34 chr2 129462556 129462795 -123793788 - MIR SINE MIR -4 258 3 24 0 0 0 chr2 129463190 129463214 -123793369 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 129463232 129463253 -123793330 + AT_rich Low_complexity Low_complexity 1 21 0 287 279 35 12 chr2 129463331 129463417 -123793166 - MIR3 SINE MIR 0 208 121 198 363 62 42 chr2 129463440 129463606 -123792977 + MIR SINE MIR 57 229 -33 2330 110 3 0 chr2 129463606 129463915 -123792668 + AluSg SINE Alu 1 310 0 198 363 62 42 chr2 129463915 129463941 -123792642 + MIR SINE MIR 229 253 -9 27 29 0 0 chr2 129464237 129464271 -123792312 + AT_rich Low_complexity Low_complexity 1 34 0 533 255 130 4 chr2 129464370 129464609 -123791974 - HAL1 LINE L1 -146 2361 2093 719 306 81 36 chr2 129464643 129465289 -123791294 - HAL1 LINE L1 -475 2032 1358 2193 111 41 0 chr2 129465495 129465839 -123790744 + HSMAR1 DNA Mariner 1 358 -929 9056 205 25 11 chr2 129465939 129468402 -123788181 - L1P5 LINE L1 -485 6382 3874 186 103 0 0 chr2 129468402 129468431 -123788152 + (TTG)n Simple_repeat Simple_repeat 2 30 0 9056 205 25 11 chr2 129468431 129468692 -123787891 - L1P5 LINE L1 -2993 3874 3618 4313 153 27 5 chr2 129468693 129470013 -123786570 - L1P5 LINE L1 -4750 2113 621 1065 157 5 0 chr2 129470001 129470198 -123786385 - L1P5 LINE L1 -6663 200 3 * 25 0 0 0 chr2 129470378 129470403 -123786180 + AT_rich Low_complexity Low_complexity 1 25 0 3684 198 44 34 chr2 129470434 129472156 -123784427 - L1MA9 LINE L1 -19 6293 4468 22 56 0 0 chr2 129472295 129472331 -123784252 + AT_rich Low_complexity Low_complexity 1 36 0 739 239 68 84 chr2 129472631 129473012 -123783571 + MLT1C LTR MaLR 13 387 -80 2106 318 116 28 chr2 129473043 129473519 -123783064 - L2 LINE L2 -1094 2220 1787 1992 122 35 0 chr2 129473519 129473807 -123782776 + AluSq SINE Alu 1 298 -15 2106 318 116 28 chr2 129473807 129474639 -123781944 - L2 LINE L2 -1527 1787 797 1191 293 56 57 chr2 129474692 129475423 -123781160 - L2 LINE L2 -213 3100 2360 210 352 0 44 chr2 129475854 129475945 -123780638 + MIR3 SINE MIR 116 202 -6 2992 141 2 0 chr2 129476090 129476567 -123780016 - L1PA14 LINE L1 -1 6160 5683 219 324 167 19 chr2 129476945 129477053 -123779530 + L2 LINE L2 3137 3260 -12 216 350 87 48 chr2 129477097 129477408 -123779175 - L2 LINE L2 -5 3267 2945 2271 115 23 0 chr2 129477604 129477909 -123778674 - AluSp SINE Alu -1 312 1 29 28 0 0 chr2 129478114 129478150 -123778433 + AT_rich Low_complexity Low_complexity 1 36 0 2636 82 0 0 chr2 129478157 129478512 -123778071 - L1PB1 LINE L1 -4 6147 5793 342 0 0 0 chr2 129478512 129478550 -123778033 + (TG)n Simple_repeat Simple_repeat 2 39 0 2632 99 5 0 chr2 129478647 129479042 -123777541 - L1PB1 LINE L1 -367 5784 5388 1663 140 52 45 chr2 129479980 129480288 -123776295 + AluSq SINE Alu 1 310 -3 4710 45 11 0 chr2 129480429 129481048 -123775535 + L1P LINE L1 3928 4553 -1593 612 122 35 0 chr2 129481070 129481185 -123775398 + L1M1 LINE L1 3330 3448 -4117 307 240 10 0 chr2 129481179 129481275 -123775308 + L1M1 LINE L1 4455 4551 -3014 * 7484 40 0 0 chr2 129481275 129482504 -123774079 + L1PA5 LINE L1 4922 6150 -4 2032 87 0 0 chr2 129482506 129482758 -123773825 + AluY SINE Alu 1 252 -59 195 42 0 0 chr2 129482874 129482898 -123773685 + (CA)n Simple_repeat Simple_repeat 1 24 0 28 29 0 0 chr2 129483948 129483983 -123772600 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr2 129484624 129484647 -123771936 + AT_rich Low_complexity Low_complexity 1 23 0 1296 174 75 7 chr2 129484885 129485057 -123771526 + L1MB5 LINE L1 5861 6063 -111 288 0 0 0 chr2 129485057 129485089 -123771494 + (TG)n Simple_repeat Simple_repeat 1 32 0 1296 174 75 7 chr2 129485089 129485210 -123771373 + L1MB5 LINE L1 6063 6174 0 1339 234 2 50 chr2 129485239 129485637 -123770946 + MLT2C1 LTR ERVL 17 395 -2 362 278 173 16 chr2 129485968 129486223 -123770360 + HAL1 LINE L1 632 926 -1581 200 372 0 0 chr2 129486248 129486334 -123770249 + (CA)n Simple_repeat Simple_repeat 2 87 0 198 0 0 0 chr2 129486439 129486461 -123770122 + (T)n Simple_repeat Simple_repeat 1 22 0 946 290 66 26 chr2 129488378 129488726 -123767857 + L2 LINE L2 1879 2240 -1074 392 314 13 7 chr2 129488766 129488919 -123767664 - HsTC2 DNA Tc2 -1694 204 51 7788 182 25 8 chr2 129488942 129491810 -123764773 - L1PB2 LINE L1 0 6208 3295 27110 43 11 4 chr2 129491916 129496390 -123760193 - L1PA5 LINE L1 -55 6099 1604 3651 162 23 18 chr2 129496490 129498755 -123757828 - L1PB2 LINE L1 -3071 3132 776 635 229 72 48 chr2 129498755 129499004 -123757579 + pTR5 LTR ERV1 743 997 -1441 2609 116 331 0 chr2 129499165 129499682 -123756901 + LTR12 LTR ERV1 1 688 0 3166 180 98 16 chr2 129499683 129500390 -123756193 - L1PB2 LINE L1 -5426 778 14 * 6512 215 19 24 chr2 129500363 129502013 -123754570 - L1PBa LINE L1 -5219 1644 3 801 306 89 54 chr2 129502095 129503073 -123753510 + L2 LINE L2 2281 3313 0 251 311 159 20 chr2 129503061 129503212 -123753371 + MIR SINE MIR 12 183 -79 * 183 235 0 0 chr2 129503871 129503922 -123752661 + CT-rich Low_complexity Low_complexity 1 51 0 24 77 0 0 chr2 129504024 129504076 -123752507 + AT_rich Low_complexity Low_complexity 1 52 0 21 0 0 0 chr2 129504093 129504114 -123752469 + AT_rich Low_complexity Low_complexity 1 21 0 726 178 81 0 chr2 129504488 129504662 -123751921 - L1MB7 LINE L1 0 6184 5997 * 867 238 7 36 chr2 129504661 129504963 -123751620 + L1M4 LINE L1 4726 5018 -1128 934 184 24 43 chr2 129504983 129505002 -123751581 + L1M4 LINE L1 5182 5200 -978 1338 201 98 0 chr2 129505002 129505276 -123751307 + AluJo SINE Alu 1 301 -11 934 184 24 43 chr2 129505276 129505584 -123750999 + L1M4 LINE L1 5200 5501 -677 824 172 0 8 chr2 129505778 129505912 -123750671 + FLAM_C SINE Alu 1 133 0 331 210 0 2 chr2 129507843 129507915 -123748668 - MIR SINE MIR -67 141 71 1852 153 36 0 chr2 129508357 129508638 -123747945 + AluSx SINE Alu 1 291 -21 186 379 39 7 chr2 129509391 129509544 -123747039 - MIR SINE MIR -60 202 45 1009 346 74 34 chr2 129509899 129510509 -123746074 + L3 LINE CR1 926 1559 -18 582 346 49 0 chr2 129511150 129511393 -123745190 - MIR SINE MIR -1 261 7 237 288 0 0 chr2 129511490 129511556 -123745027 - MER96 DNA MER1_type? -93 82 17 947 287 96 36 chr2 129511800 129512361 -123744222 - MLT1G1 LTR MaLR 0 595 1 239 61 0 0 chr2 129513310 129513343 -123743240 + U2 snRNA snRNA 4 36 -152 552 130 150 0 chr2 129513484 129513584 -123742999 + MER5B DNA MER1_type 44 158 -20 349 148 35 25 chr2 129513584 129513912 -123742671 + (TA)n Simple_repeat Simple_repeat 1 331 0 1646 174 0 14 chr2 129513928 129514204 -123742379 - AluJo SINE Alu -26 286 15 1452 245 72 2 chr2 129515337 129515604 -123740979 - MLT1C LTR MaLR 0 467 157 279 93 0 0 chr2 129515604 129515647 -123740936 + (TG)n Simple_repeat Simple_repeat 2 44 0 1452 245 72 2 chr2 129515647 129515811 -123740772 - MLT1C LTR MaLR -310 157 6 284 354 56 25 chr2 129516963 129517161 -123739422 - MIR SINE MIR -37 225 22 2467 66 124 2 chr2 129517295 129517689 -123738894 - LTR7 LTR ERV1 -8 442 1 232 325 39 0 chr2 129517982 129518059 -123738524 - L2 LINE L2 -372 2941 2862 303 256 190 0 chr2 129519861 129519982 -123736601 + MER5B DNA MER1_type 19 162 -16 380 379 28 5 chr2 129520311 129520522 -123736061 - MIR SINE MIR -33 229 14 265 296 24 47 chr2 129520712 129520852 -123735731 + MIR SINE MIR 13 150 -77 238 263 50 0 chr2 129521554 129521634 -123734949 + LTR52 LTR ERVL 187 270 -151 22 0 0 0 chr2 129522241 129522263 -123734320 + AT_rich Low_complexity Low_complexity 1 22 0 528 282 98 0 chr2 129523107 129523281 -123733302 + MIR SINE MIR 9 199 -63 610 269 0 6 chr2 129523309 129523476 -123733107 - MER45A DNA AcHobo -1 177 12 311 178 82 0 chr2 129523495 129523568 -123733015 + MER5C DNA MER1_type 46 124 -200 196 250 0 0 chr2 129523718 129523770 -123732813 + MER5C DNA MER1_type 272 323 -1 299 243 7 0 chr2 129523895 129524047 -123732536 + (TG)n Simple_repeat Simple_repeat 2 154 0 219 254 0 0 chr2 129525393 129525456 -123731127 + (TA)n Simple_repeat Simple_repeat 2 64 0 25 31 0 0 chr2 129525490 129525522 -123731061 + AT_rich Low_complexity Low_complexity 1 32 0 22 35 0 0 chr2 129525550 129525579 -123731004 + AT_rich Low_complexity Low_complexity 1 29 0 188 231 0 0 chr2 129525692 129525731 -123730852 + L2 LINE L2 3224 3262 -10 781 103 103 15 chr2 129526054 129526190 -123730393 + MER41-int LTR ERV1 79 226 -5720 271 331 55 50 chr2 129526347 129526528 -123730055 + MIR3 SINE MIR 12 193 -15 3183 151 13 2 chr2 129526563 129527120 -123729463 + MER41B LTR ERV1 73 635 0 10567 142 12 24 chr2 129527120 129527310 -123729273 + MER41B-int LTR ERV1 1 192 -5754 2162 101 0 24 chr2 129527310 129527606 -123728977 - AluSg SINE Alu -21 289 1 10567 142 12 24 chr2 129527606 129529308 -123727275 + MER41B-int LTR ERV1 192 1975 -3971 3478 125 75 66 chr2 129529308 129530664 -123725919 - pTR5 LTR ERV1 0 2438 66 3510 129 26 43 chr2 129530664 129531307 -123725276 + MER41B-int LTR ERV1 1972 2603 -3343 1865 141 12 53 chr2 129531307 129531626 -123724957 + AluSg SINE Alu 1 306 -4 290 336 0 29 chr2 129532190 129532294 -123724289 + MIR SINE MIR 30 130 -78 250 176 99 33 chr2 129532406 129532497 -123724086 + L1ME LINE L1 5569 5665 -456 1091 170 29 69 chr2 129532852 129533175 -123723408 + MER41B LTR ERV1 114 485 -150 17702 118 18 15 chr2 129533188 129533218 -123723365 + MER41B-int LTR ERV1 2171 2199 -3747 2361 78 0 0 chr2 129533218 129533512 -123723071 + AluY SINE Alu 1 294 -17 17702 118 18 15 chr2 129533512 129533977 -123722606 + MER41B-int LTR ERV1 2199 2662 -3284 2161 161 8 16 chr2 129533977 129534355 -123722228 - THE1C LTR MaLR 0 375 1 17702 118 18 15 chr2 129534355 129536887 -123719696 + MER41B-int LTR ERV1 2662 5946 0 3678 137 19 22 chr2 129536888 129537523 -123719060 + MER41B LTR ERV1 3 635 0 21 36 0 0 chr2 129537691 129537719 -123718864 + AT_rich Low_complexity Low_complexity 1 28 0 658 164 55 8 chr2 129537878 129538006 -123718577 + LTR8 LTR ERV1 1 134 -557 * 1483 173 291 19 chr2 129538005 129538370 -123718213 + LTR29 LTR ERV1 28 293 -329 3889 160 15 35 chr2 129538370 129539112 -123717471 - LTR8A LTR ERV1 0 727 1 1483 173 291 19 chr2 129539112 129539214 -123717369 + LTR29 LTR ERV1 293 622 0 1053 228 122 73 chr2 129539256 129539869 -123716714 - LTR48B LTR ERV1 0 644 2 1474 169 77 172 chr2 129540005 129540808 -123715775 - LTR8A LTR ERV1 0 727 1 1763 143 0 22 chr2 129540988 129541283 -123715300 + AluSx SINE Alu 38 312 0 201 278 42 56 chr2 129542188 129542260 -123714323 + MIR SINE MIR 29 99 -163 323 23 23 0 chr2 129542593 129542637 -123713946 + (TAGA)n Simple_repeat Simple_repeat 4 48 0 306 228 19 0 chr2 129542639 129542797 -123713786 + (TA)n Simple_repeat Simple_repeat 1 161 0 1737 185 58 11 chr2 129542847 129543209 -123713374 + MER57A LTR ERV1 1 379 -24 311 262 71 0 chr2 129543244 129543328 -123713255 - L1MC4 LINE L1 -1339 6703 6614 26 0 0 0 chr2 129543737 129543763 -123712820 + AT_rich Low_complexity Low_complexity 1 26 0 1666 244 54 56 chr2 129543986 129544507 -123712076 - MER87 LTR ERV1 -21 520 1 1780 204 78 61 chr2 129544509 129545097 -123711486 - LTR29 LTR ERV1 -20 602 5 2006 172 53 5 chr2 129545469 129545847 -123710736 + L1MA4 LINE L1 5894 6289 -11 23 0 0 0 chr2 129546581 129546604 -123709979 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr2 129547369 129547394 -123709189 + AT_rich Low_complexity Low_complexity 1 25 0 320 186 29 14 chr2 129548916 129548986 -123707597 - L2 LINE L2 -99 3214 3144 186 143 0 0 chr2 129549044 129549079 -123707504 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 298 343 73 11 chr2 129549745 129549923 -123706660 + MIR SINE MIR 1 189 -73 323 336 19 0 chr2 129550006 129550110 -123706473 + MIR SINE MIR 133 238 -24 245 329 101 32 chr2 129550207 129550365 -123706218 - MIR SINE MIR -73 189 21 325 319 112 0 chr2 129550973 129551142 -123705441 - MIR SINE MIR -1 261 74 239 281 0 24 chr2 129551146 129551228 -123705355 - MIR SINE MIR 0 262 183 * 562 263 96 94 chr2 129551222 129551384 -123705199 - L2 LINE L2 0 3313 3153 2182 123 7 0 chr2 129551384 129551693 -123704890 - AluSq SINE Alu 0 313 3 562 263 96 94 chr2 129551693 129551945 -123704638 - L2 LINE L2 -160 3153 2898 239 321 92 60 chr2 129552004 129552153 -123704430 + MIR SINE MIR 5 163 -99 1516 225 76 20 chr2 129552153 129552495 -123704088 + MLT1A1 LTR MaLR 5 365 0 239 321 92 60 chr2 129552495 129552529 -123704054 + MIR SINE MIR 163 194 -68 * 332 335 9 32 chr2 129552528 129552746 -123703837 + L2 LINE L2 2829 3041 -272 1918 104 71 4 chr2 129552779 129553048 -123703535 + AluSg SINE Alu 1 287 -23 450 167 7 36 chr2 129553981 129554119 -123702464 + GA-rich Low_complexity Low_complexity 4 137 0 1433 345 66 48 chr2 129554172 129555105 -123701478 + ERVL LTR ERVL 1786 2758 -3006 1679 200 70 12 chr2 129555105 129555450 -123701133 + MLT1A1 LTR MaLR 1 365 0 1433 345 66 48 chr2 129555450 129556008 -123700575 + ERVL LTR ERVL 2758 3304 -2460 1926 107 10 45 chr2 129556050 129556340 -123700243 + AluSx SINE Alu 1 280 -32 684 115 0 0 chr2 129556340 129556444 -123700139 + (TAAAA)n Simple_repeat Simple_repeat 2 105 0 1905 147 14 3 chr2 129557938 129558224 -123698359 - AluJb SINE Alu -23 289 1 311 342 15 4 chr2 129558240 129558358 -123698225 + MIR SINE MIR 3 122 -86 22 0 0 0 chr2 129558750 129558772 -123697811 + AT_rich Low_complexity Low_complexity 1 22 0 187 208 0 52 chr2 129558898 129558975 -123697608 + CT-rich Low_complexity Low_complexity 4 76 0 1075 222 12 20 chr2 129559029 129559277 -123697306 + L1M4 LINE L1 17 262 -6280 1175 148 63 14 chr2 129559705 129559928 -123696655 + MER50 LTR ERV1 1 234 -500 * 1543 135 0 117 chr2 129559917 129560258 -123696325 + MER50 LTR ERV1 434 734 0 186 268 211 0 chr2 129561252 129561323 -123695260 + L2 LINE L2 2560 2645 -669 1306 251 96 11 chr2 129561427 129561977 -123694606 - L1M4c LINE L1 -3327 3630 3034 326 307 66 28 chr2 129562114 129562326 -123694257 - L1M4c LINE L1 -4309 2829 2610 1856 258 83 65 chr2 129562406 129564047 -123692536 - L1M4c LINE L1 -4469 2669 861 651 346 115 22 chr2 129564125 129564587 -123691996 - L1M4c LINE L1 -6352 507 3 215 225 191 34 chr2 129564979 129565068 -123691515 + L2 LINE L2 2927 3029 -243 472 226 6 94 chr2 129565977 129566136 -123690447 - MER63A DNA MER1_type -38 172 28 273 353 101 0 chr2 129566276 129566395 -123690188 + MIR3 SINE MIR 33 163 -45 5095 51 5 0 chr2 129566943 129567527 -123689056 - LTR14C LTR ERVK 0 587 1 187 231 0 0 chr2 129567639 129567678 -123688905 - MIR SINE MIR -3 259 221 469 320 113 14 chr2 129567748 129568039 -123688544 - LTR16A LTR ERVL -122 328 9 355 266 75 50 chr2 129569379 129569539 -123687044 - L1ME4a LINE L1 -184 5937 5768 406 298 96 0 chr2 129569539 129569643 -123686940 + MER81 DNA DNA 1 114 0 355 266 75 50 chr2 129569643 129569723 -123686860 - L1ME4a LINE L1 -353 5768 5691 401 264 28 9 chr2 129569906 129570012 -123686571 + MLT1C LTR MaLR 1 108 -359 2033 138 0 0 chr2 129570023 129570354 -123686229 + AluSx SINE Alu 1 312 0 826 139 8 0 chr2 129570355 129570519 -123686064 + AluSg/x SINE Alu 152 316 0 933 171 0 0 chr2 129570521 129570712 -123685871 + AluSg/x SINE Alu 142 332 0 657 186 115 148 chr2 129570729 129571068 -123685515 + MLT1C LTR MaLR 132 459 -8 2269 89 0 10 chr2 129571272 129571574 -123685009 + AluY SINE Alu 3 301 -10 219 88 0 0 chr2 129571803 129571837 -123684746 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 604 217 26 0 chr2 129571837 129571952 -123684631 - FLAM_C SINE Alu -21 122 5 5946 57 13 16 chr2 129572019 129572773 -123683810 - SVA Other Other 0 1386 635 519 161 4 1 chr2 129572885 129572972 -123683611 - MLT1B LTR MaLR -304 86 1 770 191 8 0 chr2 129573056 129573182 -123683401 + AluJo/FLAM SINE Alu 1 127 -185 2103 125 0 0 chr2 129573183 129573478 -123683105 - AluY SINE Alu -16 295 1 503 233 112 0 chr2 129573484 129573600 -123682983 - FLAM_A SINE Alu -4 129 1 1040 204 0 45 chr2 129573837 129573996 -123682587 - AluJo SINE Alu -20 292 144 2163 110 0 7 chr2 129573996 129574287 -123682296 - AluSg1 SINE Alu -18 291 3 1040 204 0 45 chr2 129574287 129574348 -123682235 - AluJo SINE Alu -168 144 82 2397 94 3 0 chr2 129574362 129574671 -123681912 - AluSp SINE Alu -3 310 1 2131 138 0 3 chr2 129574707 129575019 -123681564 - AluSx SINE Alu -1 311 1 206 244 24 44 chr2 129575072 129575197 -123681386 + MIR SINE MIR 2 163 -99 729 181 12 50 chr2 129575197 129575335 -123681248 + MLT1A2 LTR MaLR 1 134 -231 1975 179 48 14 chr2 129575335 129575688 -123680895 + MLT1A1 LTR MaLR 1 365 0 729 181 12 50 chr2 129575688 129575709 -123680874 + MLT1A2 LTR MaLR 134 154 -211 654 169 14 68 chr2 129575714 129575862 -123680721 + L1PA16 LINE L1 6005 6144 -22 911 193 17 80 chr2 129575868 129576107 -123680476 + MLT1A2 LTR MaLR 151 374 0 1164 127 0 123 chr2 129576523 129576783 -123679800 + Tigger1 DNA MER2_type 1 228 -2190 222 23 45 45 chr2 129576791 129576835 -123679748 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 1994 121 4 7 chr2 129576836 129577117 -123679466 - AluSx SINE Alu -32 280 1 1999 98 4 0 chr2 129577311 129577566 -123679017 - AluSg SINE Alu -54 256 1 3541 140 41 2 chr2 129577577 129578142 -123678441 + Tigger1 DNA MER2_type 1832 2418 0 187 343 48 19 chr2 129578435 129578540 -123678043 - MIR SINE MIR -81 127 20 646 78 20 10 chr2 129578584 129578686 -123677897 + (TCTA)n Simple_repeat Simple_repeat 4 106 0 2033 122 3 3 chr2 129578686 129578972 -123677611 - AluSq SINE Alu -26 287 2 458 103 0 0 chr2 129579791 129579859 -123676724 - L1PB3 LINE L1 0 6154 6087 2168 106 10 3 chr2 129579882 129580175 -123676408 - AluSq SINE Alu -18 295 1 621 77 0 0 chr2 129580391 129580469 -123676114 + MER30B DNA MER1_type 1 78 -112 967 130 0 0 chr2 129580470 129580601 -123675982 + FLAM_C SINE Alu 1 131 -2 324 373 70 10 chr2 129580893 129581094 -123675489 + MIR SINE MIR 31 243 -19 2330 91 0 3 chr2 129581127 129581424 -123675159 + AluSg SINE Alu 1 296 -14 1050 171 13 46 chr2 129581712 129581970 -123674613 + AluSg/x SINE Alu 79 344 -333 2256 131 0 0 chr2 129581970 129582282 -123674301 + AluSx SINE Alu 1 312 0 1050 171 13 46 chr2 129582282 129582319 -123674264 + AluSg/x SINE Alu 344 677 0 22 0 0 0 chr2 129582361 129582383 -123674200 + AT_rich Low_complexity Low_complexity 1 22 0 4417 104 60 41 chr2 129582383 129583094 -123673489 + Tigger1 DNA MER2_type 1002 1726 -692 2154 112 0 10 chr2 129583094 129583389 -123673194 + AluSq SINE Alu 1 292 -21 2444 175 76 17 chr2 129583945 129584407 -123672176 - LTR26B LTR ERV1 0 531 43 2145 113 0 3 chr2 129584408 129584699 -123671884 - AluSx SINE Alu -16 296 7 1867 137 39 3 chr2 129585145 129585429 -123671154 + AluSx SINE Alu 1 294 -18 1016 253 88 34 chr2 129585456 129585844 -123670739 - MLT1I LTR MaLR 0 409 1 26 0 0 0 chr2 129586010 129586036 -123670547 + AT_rich Low_complexity Low_complexity 1 26 0 181 254 18 0 chr2 129586225 129586280 -123670303 + MIR SINE MIR 162 217 -45 407 132 85 47 chr2 129586996 129587022 -123669561 + MLT1C LTR MaLR 18 42 -425 1531 191 110 26 chr2 129587022 129587175 -123669408 + MLT1A2 LTR MaLR 1 140 -234 2256 108 0 0 chr2 129587175 129587472 -123669111 - AluSx SINE Alu -15 297 1 1531 191 110 26 chr2 129587472 129587663 -123668920 + MLT1A2 LTR MaLR 140 374 0 407 132 85 47 chr2 129587663 129587742 -123668841 + MLT1C LTR MaLR 42 127 -340 3693 111 43 63 chr2 129588025 129588274 -123668309 + MER39B LTR ERV1 1 253 -400 2326 115 0 3 chr2 129588274 129588586 -123667997 + AluSq SINE Alu 1 311 -2 3693 111 43 63 chr2 129588586 129588830 -123667753 + MER39B LTR ERV1 253 480 -173 2172 116 7 3 chr2 129588830 129589131 -123667452 + AluSx SINE Alu 1 302 -10 3693 111 43 63 chr2 129589131 129589302 -123667281 + MER39B LTR ERV1 480 653 0 226 174 43 0 chr2 129589746 129589792 -123666791 + MIR SINE MIR 104 151 -111 2071 124 0 0 chr2 129589961 129590236 -123666347 + AluSx SINE Alu 2 276 -36 2181 67 7 7 chr2 129590342 129590653 -123665930 - AluY SINE Alu 0 311 1 2356 93 3 0 chr2 129591360 129591670 -123664913 + AluSx SINE Alu 1 311 -1 334 196 0 0 chr2 129591678 129591734 -123664849 - MLT2D LTR ERVL -351 63 8 213 214 0 0 chr2 129591734 129591776 -123664807 + CT-rich Low_complexity Low_complexity 1 42 0 182 330 48 19 chr2 129591983 129592086 -123664497 + MIR SINE MIR 146 251 -11 195 319 14 14 chr2 129592112 129592181 -123664402 + L2 LINE L2 3013 3081 -232 285 51 0 0 chr2 129592603 129592642 -123663941 + (CA)n Simple_repeat Simple_repeat 2 40 0 2021 113 13 19 chr2 129592832 129593143 -123663440 - AluSc SINE Alu 0 309 1 1540 146 12 0 chr2 129593144 129593390 -123663193 + L1MB3 LINE L1 5674 5922 -261 27 0 0 0 chr2 129593390 129593417 -123663166 + AT_rich Low_complexity Low_complexity 1 27 0 2085 119 17 7 chr2 129593420 129593713 -123662870 - AluSx SINE Alu -16 296 1 2213 113 0 0 chr2 129593724 129594017 -123662566 - AluSx SINE Alu -19 293 1 390 21 0 0 chr2 129594029 129594076 -123662507 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2212 86 4 0 chr2 129594078 129594356 -123662227 - AluY SINE Alu -32 279 1 25 51 0 0 chr2 129594841 129594880 -123661703 + AT_rich Low_complexity Low_complexity 1 39 0 1937 118 7 7 chr2 129594917 129595206 -123661377 - AluSx SINE Alu -22 290 2 324 223 27 88 chr2 129595607 129595755 -123660828 + Charlie7 DNA MER1_type 1 139 -2473 682 176 9 0 chr2 129595923 129596031 -123660552 + AluSq/x SINE Alu 5 113 -199 253 148 25 25 chr2 129597809 129597890 -123658693 + CT-rich Low_complexity Low_complexity 1 81 0 2083 96 7 13 chr2 129599165 129599468 -123657115 - AluSg SINE Alu -9 301 1 2283 87 3 0 chr2 129599474 129599774 -123656809 - AluSp SINE Alu -12 301 1 481 286 44 28 chr2 129600021 129600203 -123656380 + MIR SINE MIR 34 218 -44 811 150 7 29 chr2 129600447 129600587 -123655996 - AluJo SINE Alu -175 137 1 248 318 12 12 chr2 129600588 129600673 -123655910 - MIR SINE MIR -57 151 67 1689 143 13 54 chr2 129600800 129601114 -123655469 - AluJb SINE Alu -11 301 1 2062 134 0 0 chr2 129602407 129602712 -123653871 + AluSx SINE Alu 1 305 -7 344 113 0 57 chr2 129602807 129602860 -123653723 + Alu SINE Alu 1 50 -250 191 175 0 0 chr2 129602972 129603012 -123653571 - MIR SINE MIR -56 206 167 276 130 0 0 chr2 129603803 129603849 -123652734 + (TG)n Simple_repeat Simple_repeat 1 46 0 331 184 103 11 chr2 129604603 129604690 -123651893 - MIR SINE MIR -10 252 158 1035 275 123 37 chr2 129604705 129605251 -123651332 - MLT1L LTR MaLR -5 610 18 2289 100 125 31 chr2 129605251 129605642 -123650941 - MSTA LTR MaLR 0 428 1 363 189 0 40 chr2 129605925 129605999 -123650584 + AluJ/FRAM SINE Alu 217 287 -15 856 179 13 0 chr2 129606005 129606161 -123650422 - AluJ SINE Alu -26 286 129 304 40 40 20 chr2 129606161 129606211 -123650372 + (TTTC)n Simple_repeat Simple_repeat 4 54 0 2062 114 7 3 chr2 129606212 129606701 -123649882 - AluSc SINE Alu 0 309 1 328 164 0 0 chr2 129606705 129606760 -123649823 - AluJ SINE Alu -161 141 87 263 254 28 14 chr2 129607020 129607091 -123649492 + MER5A DNA MER1_type 4 75 -114 * 450 221 32 11 chr2 129607083 129607178 -123649405 - MER5A DNA MER1_type -77 112 16 30 0 0 0 chr2 129607993 129608023 -123648560 + AT_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr2 129608547 129608573 -123648010 + AT_rich Low_complexity Low_complexity 1 26 0 2031 83 29 4 chr2 129608818 129609095 -123647488 - AluSx SINE Alu -28 284 1 491 240 219 28 chr2 129609363 129609646 -123646937 - MLT1J LTR MaLR -170 341 5 199 307 69 83 chr2 129609739 129610029 -123646554 + L2 LINE L2 2987 3272 -41 1975 129 0 0 chr2 129610040 129610320 -123646263 + AluSq SINE Alu 2 281 -32 460 62 15 0 chr2 129610320 129610385 -123646198 + (GGAA)n Simple_repeat Simple_repeat 3 68 0 1006 172 18 35 chr2 129610540 129610767 -123645816 + AluJo SINE Alu 85 307 -5 2763 178 52 21 chr2 129610767 129611284 -123645299 + MER21A LTR ERV1 399 931 0 1578 152 50 36 chr2 129611307 129611443 -123645140 + AluSx SINE Alu 1 134 -178 2012 103 13 16 chr2 129611443 129611755 -123644828 + AluY SINE Alu 1 311 0 1578 152 50 36 chr2 129611755 129611920 -123644663 + AluSx SINE Alu 134 306 -6 879 166 33 22 chr2 129611940 129612121 -123644462 + AluJo SINE Alu 120 302 -10 195 242 113 16 chr2 129612474 129612536 -123644047 + L2 LINE L2 3205 3272 0 569 129 11 21 chr2 129612538 129612631 -123643952 + AluJ/FLAM SINE Alu 2 93 -219 2114 100 7 7 chr2 129612632 129612941 -123643642 + AluSx SINE Alu 2 310 -2 386 276 133 46 chr2 129612978 129613174 -123643409 - MIR SINE MIR 0 262 50 1990 134 0 0 chr2 129613353 129613652 -123642931 + AluSx SINE Alu 1 299 -13 929 199 0 32 chr2 129613732 129613918 -123642665 - AluSq SINE Alu 0 313 134 955 181 0 0 chr2 129613918 129614089 -123642494 - AluSg/x SINE Alu -6 306 136 2271 79 0 16 chr2 129614228 129614544 -123642039 + AluY SINE Alu 1 311 0 1033 115 6 0 chr2 129614544 129614701 -123641882 + AluSg/x SINE Alu 133 290 -22 231 36 0 0 chr2 129614703 129614731 -123641852 + (TGAA)n Simple_repeat Simple_repeat 3 30 0 284 272 136 22 chr2 129614734 129614918 -123641665 - MLT1K LTR MaLR -68 520 316 827 287 25 18 chr2 129615628 129615641 -123640942 - L2 LINE L2 -2 3311 3300 222 118 0 0 chr2 129615641 129615675 -123640908 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 827 287 25 18 chr2 129615675 129615940 -123640643 - L2 LINE L2 -13 3300 3031 183 267 23 47 chr2 129616711 129616797 -123639786 - L3 LINE CR1 -148 1429 1346 440 333 30 7 chr2 129617410 129617545 -123639038 + MIR SINE MIR 22 159 -103 289 281 56 0 chr2 129617829 129617918 -123638665 + MIR SINE MIR 158 251 -11 375 307 35 0 chr2 129617995 129618109 -123638474 - MIR SINE MIR -98 164 47 860 113 0 23 chr2 129618161 129618294 -123638289 - FLAM_C SINE Alu -13 130 1 240 338 52 13 chr2 129618295 129618372 -123638211 + L2 LINE L2 3193 3272 0 195 42 0 0 chr2 129618435 129618459 -123638124 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2048 119 0 0 chr2 129618462 129618748 -123637835 - AluSq SINE Alu -27 286 1 2119 103 0 30 chr2 129618804 129619106 -123637477 - AluSg SINE Alu -17 293 1 2205 190 16 8 chr2 129669181 129669670 -123586913 - L1P LINE L1 -2597 3549 3057 4663 195 25 9 chr2 129669685 129670665 -123585918 + L1P LINE L1 4289 5283 -863 5955 115 7 2 chr2 129670665 129671769 -123584814 + L1PA14 LINE L1 5051 6158 -3 574 243 108 27 chr2 129672662 129672847 -123583736 + MER3 DNA MER1_type 9 208 -1 2191 124 0 0 chr2 129672851 129673157 -123583426 - AluSg SINE Alu -4 306 1 22 0 0 0 chr2 129673174 129673196 -123583387 + AT_rich Low_complexity Low_complexity 1 22 0 219 184 41 31 chr2 129673224 129673322 -123583261 + (TTATA)n Simple_repeat Simple_repeat 1 99 0 1155 271 43 34 chr2 129674121 129674535 -123582048 + MLT1C LTR MaLR 50 467 0 4782 221 24 87 chr2 129674536 129675947 -123580636 + MLT1C-int LTR MaLR 2 1323 -48 975 267 100 25 chr2 129675991 129676422 -123580161 + MLT1C LTR MaLR 5 467 0 186 133 0 0 chr2 129676565 129676595 -123579988 + (TATATG)n Simple_repeat Simple_repeat 2 31 0 1546 182 24 14 chr2 129676596 129676892 -123579691 - AluJo SINE Alu -11 301 3 26 30 0 0 chr2 129677656 129677689 -123578894 + AT_rich Low_complexity Low_complexity 1 33 0 505 153 9 9 chr2 129677926 129678037 -123578546 + (TA)n Simple_repeat Simple_repeat 2 112 0 408 347 75 15 chr2 129679780 129680045 -123576538 + L1ME LINE L1 4537 4817 -1329 840 312 60 16 chr2 129680195 129680947 -123575636 + L1ME LINE L1 4968 5769 -393 22 0 0 0 chr2 129681020 129681042 -123575541 + AT_rich Low_complexity Low_complexity 1 22 0 34 42 0 0 chr2 129681118 129681166 -123575417 + AT_rich Low_complexity Low_complexity 1 48 0 209 171 0 0 chr2 129683314 129683349 -123573234 + (CA)n Simple_repeat Simple_repeat 2 36 0 25 0 0 0 chr2 129683445 129683470 -123573113 + AT_rich Low_complexity Low_complexity 1 25 0 186 370 20 50 chr2 129684459 129684559 -123572024 - MIR3 SINE MIR -5 203 107 325 297 59 10 chr2 129685744 129685845 -123570738 - MIR3 SINE MIR -19 189 84 181 287 117 0 chr2 129686301 129686395 -123570188 - MIR SINE MIR -70 192 88 233 391 25 25 chr2 129687182 129687343 -123569240 + MIR SINE MIR 21 181 -81 2300 273 82 43 chr2 129687346 129687456 -123569127 + L1MEc LINE L1 234 338 -6269 190 0 67 0 chr2 129687456 129687486 -123569097 + (TAGA)n Simple_repeat Simple_repeat 1 32 0 2300 273 82 43 chr2 129687486 129688526 -123568057 + L1MEc LINE L1 338 1430 -5177 374 289 39 10 chr2 129688576 129688780 -123567803 + L1MEc LINE L1 1355 1564 -4862 392 250 184 7 chr2 129688951 129689103 -123567480 + L1MEc LINE L1 1788 1966 -4641 1071 237 115 9 chr2 129689700 129690057 -123566526 - L1MD2 LINE L1 -3 6356 5937 2720 262 81 72 chr2 129690079 129690520 -123566063 - L1MDb LINE L1 -4369 2037 1601 2066 135 3 0 chr2 129690520 129690831 -123565752 - AluSx SINE Alu 0 312 1 2720 262 81 72 chr2 129690831 129692457 -123564126 - L1MDb LINE L1 -4805 1601 16 22 35 0 0 chr2 129692802 129692831 -123563752 + AT_rich Low_complexity Low_complexity 1 29 0 309 350 0 0 chr2 129692943 129693040 -123563543 - L2 LINE L2 0 3313 3217 9412 216 38 13 chr2 129693525 129698927 -123557656 - L1MA5A LINE L1 0 6939 1346 2103 154 14 30 chr2 129698965 129699335 -123557248 - THE1B LTR MaLR 0 364 1 10919 120 8 3 chr2 129699340 129700905 -123555678 - THE1B-int LTR MaLR -5 1575 3 2009 140 45 28 chr2 129700909 129701265 -123555318 - THE1B LTR MaLR -2 362 1 4750 297 39 8 chr2 129701273 129702951 -123553632 - L1MA5A LINE L1 -5409 1380 4 365 282 84 64 chr2 129703501 129703799 -123552784 + L1ME3 LINE L1 5006 5309 -837 600 333 86 25 chr2 129703817 129704385 -123552198 + L1ME3 LINE L1 5347 5949 -213 261 239 161 33 chr2 129705703 129705883 -123550700 - MLT1J1 LTR MaLR -231 215 13 273 275 92 35 chr2 129705884 129706026 -123550557 + L2 LINE L2 3141 3290 -23 309 324 34 29 chr2 129706232 129706436 -123550147 - L1ME3A LINE L1 -1 6169 5965 5312 157 40 31 chr2 129706440 129708204 -123548379 - L1MA4A LINE L1 0 6303 4530 645 171 50 21 chr2 129708295 129708435 -123548148 - L1 LINE L1 -1087 5059 4916 219 254 191 9 chr2 129709423 129709533 -123547050 + MIR SINE MIR 121 250 -12 363 379 7 7 chr2 129710633 129710778 -123545805 - L2 LINE L2 -1 3312 3168 227 271 62 10 chr2 129710917 129711013 -123545570 - MLT1L LTR MaLR -345 270 170 436 317 79 23 chr2 129711206 129711510 -123545073 - L1ME3A LINE L1 -289 5877 5558 566 328 98 39 chr2 129711669 129711874 -123544709 - L1ME3A LINE L1 -743 5403 5212 5647 102 39 0 chr2 129711874 129713345 -123543238 - L1PA14 LINE L1 0 6161 4631 566 328 98 39 chr2 129713345 129714029 -123542554 - L1ME3A LINE L1 -934 5212 4456 22 56 0 0 chr2 129716071 129716107 -123540476 + AT_rich Low_complexity Low_complexity 1 36 0 25 65 0 0 chr2 129716841 129716887 -123539696 + AT_rich Low_complexity Low_complexity 1 46 0 26 0 0 0 chr2 129718190 129718216 -123538367 + AT_rich Low_complexity Low_complexity 1 26 0 1829 304 161 20 chr2 129718231 129719630 -123536953 - L2 LINE L2 -1 3312 1708 2089 163 45 45 chr2 129719631 129720089 -123536494 + MER44D DNA MER2_type 1 530 -75 679 166 195 55 chr2 129720118 129720332 -123536251 + THE1A LTR MaLR 113 355 0 440 221 14 76 chr2 129720332 129720418 -123536165 + MER44D DNA MER2_type 533 609 0 222 167 0 0 chr2 129720420 129720462 -123536121 - L2 LINE L2 -1612 1702 1661 23 68 0 0 chr2 129720654 129720698 -123535885 + AT_rich Low_complexity Low_complexity 1 44 0 190 325 0 52 chr2 129722467 129722544 -123534039 - L3 LINE CR1 -1046 531 459 1255 207 38 102 chr2 129723050 129723500 -123533083 - L1MD2 LINE L1 -22 6337 5917 1092 274 145 18 chr2 129723791 129724226 -123532357 - MLT1E2 LTR MaLR 0 626 137 450 49 0 0 chr2 129724337 129724398 -123532185 + (TG)n Simple_repeat Simple_repeat 1 61 0 219 303 45 0 chr2 129725700 129725789 -123530794 - MIR3 SINE MIR -6 202 110 279 248 37 28 chr2 129725985 129726094 -123530489 - HAL1b LINE L1 -41 1307 1198 286 370 117 7 chr2 129726868 129727022 -123529561 - MLT1I LTR MaLR -137 272 102 198 91 0 0 chr2 129728300 129728333 -123528250 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 2040 48 0 0 chr2 129728336 129728586 -123527997 - L1PA5 LINE L1 -13 6141 5892 389 365 75 14 chr2 129728721 129729003 -123527580 - MLT1I LTR MaLR -48 361 63 434 237 22 1 chr2 129729070 129729734 -123526849 + (TA)n Simple_repeat Simple_repeat 1 677 0 2259 142 70 25 chr2 129730017 129730522 -123526061 - MLT2A2 LTR ERVL 0 554 1 51 42 0 0 chr2 129731099 129731171 -123525412 + AT_rich Low_complexity Low_complexity 1 72 0 888 319 106 33 chr2 129731251 129731939 -123524644 + L2 LINE L2 2505 3234 -79 216 0 0 0 chr2 129732005 129732029 -123524554 + (TG)n Simple_repeat Simple_repeat 2 25 0 430 241 0 0 chr2 129732077 129732164 -123524419 + Tigger5 DNA MER2_type 2237 2323 0 258 290 10 10 chr2 129732196 129732296 -123524287 + (TA)n Simple_repeat Simple_repeat 2 101 0 232 167 42 0 chr2 129732296 129732344 -123524239 - L1MD3 LINE L1 -1327 6668 6619 228 135 0 0 chr2 129732345 129732382 -123524201 + (TA)n Simple_repeat Simple_repeat 2 38 0 1324 200 18 14 chr2 129732475 129732760 -123523823 - AluJb SINE Alu -26 286 1 1970 109 36 4 chr2 129732783 129733108 -123523475 - AluSc SINE Alu 0 334 1 243 203 0 0 chr2 129733544 129733603 -123522980 + GA-rich Low_complexity Low_complexity 2 60 0 636 214 62 13 chr2 129733846 129734070 -123522513 + Charlie5 DNA MER1_type 2324 2558 -54 1604 224 3 3 chr2 129734254 129734607 -123521976 + L1P LINE L1 3499 3851 -2295 1343 291 33 80 chr2 129734767 129735579 -123521004 - HERVI LTR ERV1 -129 7656 6883 219 313 0 35 chr2 129736064 129736179 -123520404 + CT-rich Low_complexity Low_complexity 1 111 0 6085 25 8 0 chr2 129736179 129736897 -123519686 - L1PA2 LINE L1 0 6155 5432 279 216 0 23 chr2 129736974 129737062 -123519521 - LTR18B LTR ERVL -261 353 268 448 128 58 23 chr2 129737098 129737184 -123519399 - LTR18B LTR ERVL -193 421 333 1047 336 38 31 chr2 129737184 129737656 -123518927 - HERVI LTR ERV1 -5751 2034 1554 2744 24 24 6 chr2 129737656 129738037 -123518546 + L1PA3 LINE L1 5811 6155 0 1047 336 38 31 chr2 129738037 129738304 -123518279 - HERVI LTR ERV1 -6231 1554 1290 469 345 32 8 chr2 129738499 129738751 -123517832 - HERVI LTR ERV1 -6768 1017 760 2488 220 61 47 chr2 129739884 129740078 -123516505 - L1MB5 LINE L1 -164 6508 6318 4250 74 2 0 chr2 129740078 129740630 -123515953 - L1PA7 LINE L1 -4 6150 5598 2488 220 61 47 chr2 129740630 129741477 -123515106 - L1MB5 LINE L1 -354 6318 5429 351 0 0 0 chr2 129741477 129741516 -123515067 + (TG)n Simple_repeat Simple_repeat 2 40 0 2488 220 61 47 chr2 129741516 129741605 -123514978 - L1MB5 LINE L1 -1243 5429 5343 1426 270 86 88 chr2 129741605 129742373 -123514210 - L1MB5 LINE L1 -5321 1221 453 5785 171 52 14 chr2 129742373 129743558 -123513025 + Tigger3b DNA MER2_type 2 1231 0 1426 270 86 88 chr2 129743558 129743693 -123512890 - L1MB5 LINE L1 -6089 453 319 1666 178 34 0 chr2 129743693 129743985 -123512598 + AluJo SINE Alu 1 302 -10 1426 270 86 88 chr2 129743985 129744299 -123512284 - L1MB5 LINE L1 -6223 319 5 216 331 30 45 chr2 129744803 129744936 -123511647 - MIR SINE MIR -20 242 112 22 0 0 0 chr2 129745395 129745417 -123511166 + AT_rich Low_complexity Low_complexity 1 22 0 1644 259 83 7 chr2 129745574 129745855 -123510728 + MLT1D LTR MaLR 16 347 -158 225 65 0 0 chr2 129745855 129745886 -123510697 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 1644 259 83 7 chr2 129745886 129746059 -123510524 + MLT1D LTR MaLR 347 505 0 1095 244 14 42 chr2 129746664 129747020 -123509563 - L1MC2 LINE L1 -11 6333 5988 508 172 17 0 chr2 129747022 129747138 -123509445 + CT-rich Low_complexity Low_complexity 6 123 0 625 172 17 17 chr2 129747141 129747257 -123509326 - FRAM SINE Alu -66 110 1 273 57 0 0 chr2 129747258 129747293 -123509290 + (TG)n Simple_repeat Simple_repeat 2 36 0 331 125 28 0 chr2 129747302 129747374 -123509209 + (TA)n Simple_repeat Simple_repeat 1 74 0 210 37 0 0 chr2 129747381 129747408 -123509175 + (TG)n Simple_repeat Simple_repeat 2 28 0 441 202 0 0 chr2 129747409 129747493 -123509090 - FLAM_A SINE Alu -13 129 46 180 239 232 22 chr2 129747728 129747866 -123508717 + L2 LINE L2 3137 3303 -10 3161 83 18 9 chr2 129747870 129748318 -123508265 + L1PA8 LINE L1 5720 6171 -1 206 346 0 12 chr2 129749360 129749441 -123507142 - MIR SINE MIR -160 102 23 850 88 102 29 chr2 129749688 129749871 -123506712 - AluSx SINE Alu 0 328 136 581 128 0 0 chr2 129749871 129749957 -123506626 - AluSx SINE Alu -227 86 1 181 317 0 17 chr2 129750431 129750491 -123506092 - L2 LINE L2 -9 3304 3246 2187 122 0 0 chr2 129750923 129751226 -123505357 - AluSx SINE Alu -9 303 1 219 382 0 0 chr2 129751248 129751316 -123505267 - MIR SINE MIR -149 113 46 207 218 109 24 chr2 129751540 129751642 -123504941 - MIR SINE MIR -3 259 104 312 27 0 0 chr2 129752991 129753028 -123503555 + (TG)n Simple_repeat Simple_repeat 2 38 0 2382 80 0 10 chr2 129753168 129753482 -123503101 - AluY SINE Alu 0 311 1 560 253 0 129 chr2 129753896 129754013 -123502570 - MIR SINE MIR -13 249 167 8047 94 112 19 chr2 129754013 129755270 -123501313 - SVA Other Other 0 1386 13 560 253 0 129 chr2 129755270 129755354 -123501229 - MIR SINE MIR -95 167 74 350 234 56 28 chr2 129755817 129755924 -123500659 + MIR SINE MIR 97 206 -56 194 0 39 0 chr2 129756302 129756328 -123500255 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 23 0 0 0 chr2 129756438 129756461 -123500122 + AT_rich Low_complexity Low_complexity 1 23 0 220 296 148 15 chr2 129758170 129758305 -123498278 - MIR SINE MIR -7 255 103 5376 176 21 2 chr2 129758910 129759728 -123496855 + L1PA7 LINE L1 5315 6147 -7 282 125 0 0 chr2 129760156 129760204 -123496379 + (TC)n Simple_repeat Simple_repeat 1 48 0 21 71 0 0 chr2 129760857 129760899 -123495684 + AT_rich Low_complexity Low_complexity 1 42 0 25 31 0 0 chr2 129761120 129761152 -123495431 + AT_rich Low_complexity Low_complexity 1 32 0 355 375 105 33 chr2 129763331 129763845 -123492738 - L3 LINE CR1 -1 1576 1026 231 308 31 82 chr2 129764329 129764488 -123492095 + MIR SINE MIR 56 206 -56 221 393 97 0 chr2 129765533 129765729 -123490854 - MIR SINE MIR -11 251 37 189 74 0 0 chr2 129766518 129766545 -123490038 + (TC)n Simple_repeat Simple_repeat 2 28 0 34 42 0 0 chr2 129766749 129766797 -123489786 + AT_rich Low_complexity Low_complexity 1 48 0 4102 110 39 0 chr2 129766887 129767507 -123489076 - L1PA13 LINE L1 -1 6162 5519 1598 110 70 12 chr2 129767514 129767882 -123488701 + L1P4 LINE L1 5098 5478 -690 261 219 0 0 chr2 129769035 129769108 -123487475 + (CACCAT)n Simple_repeat Simple_repeat 6 78 0 232 335 99 16 chr2 129769129 129769311 -123487272 - MIR SINE MIR -13 249 53 1984 190 41 28 chr2 129770993 129771540 -123485043 + MLT2A2 LTR ERVL 1 554 0 5706 159 25 14 chr2 129771541 129772747 -123483836 - L1MA2 LINE L1 -10 7713 6490 1989 131 34 7 chr2 129772747 129773038 -123483545 + AluSx SINE Alu 1 299 -13 5706 159 25 14 chr2 129773038 129773628 -123482955 - L1MA2 LINE L1 -1233 6490 5908 5425 178 50 26 chr2 129773636 129773895 -123482688 - L1MA2 LINE L1 -5511 2054 1803 405 0 0 0 chr2 129773895 129773940 -123482643 + (TC)n Simple_repeat Simple_repeat 2 46 0 5425 178 50 26 chr2 129773940 129774723 -123481860 - L1MA2 LINE L1 -5762 1803 987 369 0 0 0 chr2 129776034 129776075 -123480508 + (TA)n Simple_repeat Simple_repeat 1 41 0 2432 59 0 0 chr2 129776077 129776365 -123480218 - AluY SINE Alu -23 288 1 357 350 88 53 chr2 129776392 129776789 -123479794 + L1MB3 LINE L1 8 418 -6124 1272 252 86 63 chr2 129776955 129777178 -123479405 + L1MB3 LINE L1 611 827 -5715 183 42 0 0 chr2 129777178 129777202 -123479381 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1272 252 86 63 chr2 129777202 129777841 -123478742 + L1MB3 LINE L1 827 1459 -5083 212 171 0 0 chr2 129777846 129777881 -123478702 + (CATA)n Simple_repeat Simple_repeat 4 38 0 5441 229 55 103 chr2 129777887 129778716 -123477867 + L1MB3 LINE L1 1870 2737 -3944 186 71 0 0 chr2 129778716 129778744 -123477839 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 5441 229 55 103 chr2 129778744 129779130 -123477453 + L1MB3 LINE L1 2737 3140 -3541 1803 126 4 0 chr2 129779130 129779391 -123477192 - AluSx SINE Alu -15 297 36 5441 229 55 103 chr2 129779391 129779705 -123476878 + L1MB3 LINE L1 3140 3468 -3213 200 83 0 28 chr2 129779705 129779741 -123476842 + (TAAAA)n Simple_repeat Simple_repeat 1 35 0 5441 229 55 103 chr2 129779741 129780697 -123475886 + L1MB3 LINE L1 3468 4468 -2213 7367 30 10 1 chr2 129780697 129782104 -123474479 + L1PA3 LINE L1 4774 6155 0 5441 229 55 103 chr2 129782104 129784488 -123472095 + L1MB3 LINE L1 4468 6618 -63 429 192 16 39 chr2 129784541 129784723 -123471860 + GA-rich Low_complexity Low_complexity 3 180 0 1478 244 15 60 chr2 129785786 129786188 -123470395 - MLT1D LTR MaLR -121 384 1 26 0 0 0 chr2 129786388 129786414 -123470169 + AT_rich Low_complexity Low_complexity 1 26 0 220 219 0 0 chr2 129786802 129786843 -123469740 + (TATATG)n Simple_repeat Simple_repeat 5 45 0 446 313 246 18 chr2 129786927 129787314 -123469269 - L2 LINE L2 -937 2377 1903 371 301 56 25 chr2 129787449 129787645 -123468938 + Charlie8 DNA MER1_type 91 292 -2125 204 366 14 0 chr2 129789773 129789844 -123466739 - L2 LINE L2 -12 3260 3189 6878 194 159 9 chr2 129789852 129790108 -123466475 + MER52A LTR ERV1 3 219 -1536 2094 109 0 3 chr2 129790108 129790437 -123466146 + AluSx SINE Alu 1 328 0 6878 194 159 9 chr2 129790437 129791703 -123464880 + MER52A LTR ERV1 219 1755 0 3362 238 50 22 chr2 129792153 129792538 -123464045 - L1MB8 LINE L1 0 7138 6765 2020 133 10 0 chr2 129792538 129792832 -123463751 - AluSc SINE Alu -12 297 1 3362 238 50 22 chr2 129792832 129793384 -123463199 - L1MB8 LINE L1 -373 6765 6230 2218 75 0 20 chr2 129793384 129793699 -123462884 - AluSx SINE Alu 0 312 6 3362 238 50 22 chr2 129793699 129794264 -123462319 - L1MB8 LINE L1 -908 6230 5579 201 74 0 0 chr2 129794264 129794291 -123462292 + (TA)n Simple_repeat Simple_repeat 2 28 0 3362 238 50 22 chr2 129794291 129794437 -123462146 - L1MB8 LINE L1 -1559 5579 5438 1723 195 7 0 chr2 129794443 129794751 -123461832 - AluSx SINE Alu -2 310 1 1330 270 89 33 chr2 129794751 129795604 -123460979 - L1MB8 LINE L1 -2596 4510 3610 443 200 0 9 chr2 129795610 129795720 -123460863 + (CA)n Simple_repeat Simple_repeat 1 109 0 621 284 29 4 chr2 129795723 129795998 -123460585 - L1MB8 LINE L1 -3493 3613 3332 869 163 43 5 chr2 129796004 129796188 -123460395 - L1 LINE L1 -1820 4326 4136 2591 249 87 47 chr2 129796243 129797253 -123459330 - L1MB8 LINE L1 -5979 1051 1 484 117 13 0 chr2 129797254 129797331 -123459252 - L1MB2 LINE L1 -37 6134 6057 232 192 0 0 chr2 129797333 129797385 -123459198 - L1M1 LINE L1 -684 5619 5568 221 167 0 0 chr2 129797415 129797457 -123459126 + T-rich Low_complexity Low_complexity 1 42 0 7237 28 8 0 chr2 129797459 129798323 -123458260 - L1PA4 LINE L1 -3 6152 5282 1762 219 57 8 chr2 129798323 129798950 -123457633 - L1M1 LINE L1 -684 5496 4839 387 41 0 0 chr2 129799051 129799100 -123457483 + (TG)n Simple_repeat Simple_repeat 2 50 0 335 295 8 16 chr2 129799105 129799229 -123457354 - L1M4c LINE L1 -4633 2326 2223 1234 255 35 58 chr2 129799257 129799728 -123456855 - L1M4c LINE L1 -6269 590 4 237 33 0 0 chr2 129800552 129800582 -123456001 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 605 214 0 0 chr2 129800677 129800817 -123455766 + L1M3d LINE L1 1490 1629 -4674 * 1028 302 40 14 chr2 129800808 129801228 -123455355 + L1M3d LINE L1 1170 1600 -4784 963 275 51 43 chr2 129801232 129801477 -123455106 + L1M3d LINE L1 1791 2032 -4352 2044 99 11 0 chr2 129801477 129801782 -123454801 + AluSp SINE Alu 1 308 0 963 275 51 43 chr2 129801782 129802110 -123454473 + L1M3d LINE L1 2032 2379 -4005 391 332 68 16 chr2 129803110 129803300 -123453283 + MIR SINE MIR 62 261 -1 23 68 0 0 chr2 129803735 129803779 -123452804 + AT_rich Low_complexity Low_complexity 1 44 0 198 0 0 0 chr2 129804166 129804188 -123452395 + (TC)n Simple_repeat Simple_repeat 2 23 0 23 54 0 0 chr2 129807596 129807633 -123448950 + AT_rich Low_complexity Low_complexity 1 37 0 336 347 71 5 chr2 129808398 129808594 -123447989 + L1ME LINE L1 17 225 -5845 * 1214 290 84 44 chr2 129808592 129808808 -123447775 + L1M3d LINE L1 3279 3485 -2897 327 85 0 0 chr2 129808808 129808855 -123447728 + (TG)n Simple_repeat Simple_repeat 1 47 0 204 40 0 0 chr2 129808854 129808879 -123447704 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 1214 290 84 44 chr2 129808855 129809819 -123446764 + L1M3d LINE L1 3485 4481 -1901 * 18743 201 43 14 chr2 129809815 129812380 -123444203 + L1M1 LINE L1 11 2501 -5064 1818 80 127 4 chr2 129812380 129812655 -123443928 + AluSg1 SINE Alu 1 309 0 18743 201 43 14 chr2 129812655 129816701 -123439882 + L1M1 LINE L1 2501 6822 -743 1119 189 0 5 chr2 129816707 129816913 -123439670 + LOR1a LTR ERV1 254 458 -39 466 256 74 28 chr2 129816937 129817152 -123439431 + L1M3d LINE L1 4754 4978 -1404 409 311 0 0 chr2 129817629 129817732 -123438851 + L1PA15-16 LINE L1 1472 1574 -5275 * 7156 258 29 19 chr2 129817707 129820992 -123435591 + L1PA16 LINE L1 1336 4752 -2097 3091 198 55 29 chr2 129820998 129821686 -123434897 + L1PA16 LINE L1 6139 6844 -25 2424 266 53 27 chr2 129821775 129823081 -123433502 + L1ME2 LINE L1 4603 5938 -50 434 308 164 5 chr2 129824457 129824652 -123431931 + MIR SINE MIR 31 256 -6 236 178 0 0 chr2 129825041 129825086 -123431497 - MER20 DNA MER1_type -140 79 35 1173 140 122 9 chr2 129825150 129825371 -123431212 + MSTA LTR MaLR 1 246 -182 180 234 0 0 chr2 129825984 129826031 -123430552 + GA-rich Low_complexity Low_complexity 3 49 0 33 80 0 0 chr2 129826177 129826252 -123430331 + AT_rich Low_complexity Low_complexity 1 75 0 1806 144 168 8 chr2 129826738 129827107 -123429476 - MSTA LTR MaLR 0 428 1 24 53 0 0 chr2 129827511 129827549 -123429034 + AT_rich Low_complexity Low_complexity 1 38 0 3852 78 39 0 chr2 129827558 129828072 -123428511 - L1PA8 LINE L1 -21 6151 5618 1011 119 2 1 chr2 129828072 129828230 -123428353 + L1P3 LINE L1 5439 5579 -593 279 206 0 0 chr2 129828223 129828286 -123428297 - L1MB2 LINE L1 -31 6140 6078 * 1422 206 3 20 chr2 129829671 129829967 -123426616 + AluJb SINE Alu 1 291 -11 287 311 79 12 chr2 129829995 129830159 -123426424 - L1M4 LINE L1 -1930 4216 4042 1828 81 12 0 chr2 129830897 129831201 -123425382 + AluY SINE Alu 33 339 0 3236 219 10 52 chr2 129831201 129832100 -123424483 + L1MB3 LINE L1 5325 6183 0 446 298 157 49 chr2 129832124 129832576 -123424007 + L1ME LINE L1 5195 5718 -446 1877 141 35 0 chr2 129832576 129832859 -123423724 - AluSx SINE Alu -19 293 1 446 298 157 49 chr2 129832859 129832977 -123423606 + L1ME LINE L1 5718 5822 -342 218 250 0 38 chr2 129833134 129833214 -123423369 + (TATG)n Simple_repeat Simple_repeat 2 78 0 * 219 200 22 0 chr2 129833170 129833215 -123423368 + (TATATG)n Simple_repeat Simple_repeat 5 50 0 229 246 92 8 chr2 129833215 129833345 -123423238 + LTR37A LTR ERV1 286 426 0 24 0 0 0 chr2 129833356 129833380 -123423203 + AT_rich Low_complexity Low_complexity 1 24 0 2973 155 10 94 chr2 129833977 129834267 -123422316 + MER41D LTR ERV1 1 314 -243 2160 86 10 13 chr2 129834267 129834571 -123422012 + L1PA8 LINE L1 5864 6166 -6 2973 155 10 94 chr2 129834571 129834597 -123421986 + MER41D LTR ERV1 314 341 -216 186 43 0 0 chr2 129834597 129834620 -123421963 + (TA)n Simple_repeat Simple_repeat 2 24 0 2973 155 10 94 chr2 129834620 129834910 -123421673 + MER41D LTR ERV1 341 557 0 37282 50 11 5 chr2 129835413 129840901 -123415682 + L1PA3 LINE L1 623 6149 -6 181 240 60 0 chr2 129841070 129841120 -123415463 - L3 LINE CR1 -151 1426 1374 2577 125 0 5 chr2 129844433 129844810 -123411773 + THE1C LTR MaLR 1 375 0 214 147 0 0 chr2 129845192 129845226 -123411357 + (CA)n Simple_repeat Simple_repeat 2 35 0 1684 148 60 36 chr2 129846086 129846450 -123410133 - THE1C LTR MaLR 0 375 3 187 29 86 0 chr2 129847565 129847600 -123408983 + A-rich Low_complexity Low_complexity 5 42 0 206 312 64 28 chr2 129847734 129847843 -123408740 + MIR SINE MIR 128 240 -22 346 355 16 8 chr2 129847975 129848096 -123408487 - MIR3 SINE MIR -48 160 39 33 25 0 0 chr2 129848099 129848139 -123408444 + AT_rich Low_complexity Low_complexity 1 40 0 35 54 0 0 chr2 129849040 129849096 -123407487 + AT_rich Low_complexity Low_complexity 1 56 0 415 234 218 0 chr2 129850666 129850790 -123405793 - MIR SINE MIR -1 261 111 206 61 0 30 chr2 129850834 129850867 -123405716 + (GAAAA)n Simple_repeat Simple_repeat 2 33 0 2111 70 7 11 chr2 129851342 129851628 -123404955 + AluY SINE Alu 27 311 0 1474 317 74 28 chr2 129852763 129853270 -123403313 + L2 LINE L2 1785 2334 -980 2332 91 0 0 chr2 129853270 129853566 -123403017 - AluSg SINE Alu -14 296 1 1474 317 74 28 chr2 129853566 129853764 -123402819 + L2 LINE L2 2334 2522 -792 1872 196 11 18 chr2 129853781 129854090 -123402493 - LTR69 LTR ERVL -16 572 225 1860 142 32 26 chr2 129854090 129854401 -123402182 - AluSq SINE Alu 0 313 1 1872 196 11 18 chr2 129854401 129854625 -123401958 - LTR69 LTR ERVL -363 225 1 469 256 35 103 chr2 129854627 129854830 -123401753 + L2 LINE L2 2522 2710 -604 720 198 0 0 chr2 129854830 129854951 -123401632 + FLAM_C SINE Alu 1 121 -22 754 301 96 50 chr2 129854966 129855540 -123401043 + L2 LINE L2 2701 3313 0 473 302 23 23 chr2 129855698 129855870 -123400713 + MLT1I LTR MaLR 50 221 -188 235 286 0 0 chr2 129856018 129856067 -123400516 + L2 LINE L2 3199 3247 -25 226 214 0 0 chr2 129856331 129856373 -123400210 + GA-rich Low_complexity Low_complexity 3 44 0 541 333 26 10 chr2 129856671 129856863 -123399720 + MIR SINE MIR 32 226 -36 290 302 38 9 chr2 129856893 129856999 -123399584 - MIR SINE MIR -66 196 88 2063 141 35 16 chr2 129857035 129857403 -123399180 - THE1C LTR MaLR 0 375 1 1849 79 7 72 chr2 129857403 129857695 -123398888 - THE1C-int LTR MaLR 0 1580 1308 536 147 64 28 chr2 129857698 129857807 -123398776 - THE1C LTR MaLR -262 113 1 237 224 0 0 chr2 129858653 129858746 -123397837 + (TATG)n Simple_repeat Simple_repeat 1 93 0 1604 277 103 17 chr2 129858770 129859294 -123397289 - MLT1E LTR MaLR 0 593 25 206 391 14 14 chr2 129859402 129859540 -123397043 - MIR3 SINE MIR -68 140 3 314 333 68 0 chr2 129859925 129860057 -123396526 - L2 LINE L2 -8 3305 3165 601 241 45 40 chr2 129860434 129860633 -123395950 - MLT1E LTR MaLR -42 551 352 21 0 0 0 chr2 129860673 129860694 -123395889 + AT_rich Low_complexity Low_complexity 1 21 0 3365 245 27 41 chr2 129861715 129862921 -123393662 + L1MC1 LINE L1 4023 5212 -934 3190 173 52 19 chr2 129862913 129863548 -123393035 + L1MC1 LINE L1 5514 6169 -164 * 3804 160 53 24 chr2 129863548 129864305 -123392278 - LTR1 LTR ERV1 0 785 7 765 177 67 12 chr2 129864318 129864482 -123392101 + L1MC1 LINE L1 6161 6333 0 2330 70 0 7 chr2 129864656 129864986 -123391597 + AluY SINE Alu 6 311 0 357 294 49 55 chr2 129865004 129865167 -123391416 + HAL1 LINE L1 263 424 -2083 981 311 93 43 chr2 129865213 129866477 -123390106 + HAL1 LINE L1 534 1860 -647 1081 53 8 0 chr2 129866847 129866978 -123389605 + AluSg SINE Alu 3 134 -176 1881 123 0 14 chr2 129866978 129867262 -123389321 + AluY SINE Alu 32 311 0 10091 69 1 3 chr2 129867365 129869475 -123387108 - L1PA6 LINE L1 0 6154 4049 343 316 39 24 chr2 129869603 129869809 -123386774 + L1ME LINE L1 2905 3113 -3033 24 67 0 0 chr2 129869985 129870030 -123386553 + AT_rich Low_complexity Low_complexity 1 45 0 2271 118 0 0 chr2 129871006 129871311 -123385272 - AluSx SINE Alu -5 307 3 2346 88 0 0 chr2 129871449 129871746 -123384837 + AluSc SINE Alu 1 297 -12 437 321 61 35 chr2 129871756 129872133 -123384450 + L1ME LINE L1 4915 5301 -845 318 281 105 49 chr2 129872202 129872469 -123384114 + L1ME LINE L1 5386 5667 -503 1035 86 0 7 chr2 129873106 129873246 -123383337 + MER85 DNA T2_type 1 139 0 488 113 25 25 chr2 129873925 129874005 -123382578 + MER85 DNA T2_type 9 88 -51 273 296 69 61 chr2 129874546 129874793 -123381790 + MLT1L LTR MaLR 164 412 -203 330 296 7 59 chr2 129874940 129875075 -123381508 + LTR67 LTR ERVL 97 224 -333 424 266 22 14 chr2 129875191 129875330 -123381253 + LTR67 LTR ERVL 418 557 0 232 360 0 0 chr2 129875364 129875439 -123381144 + MER5B DNA MER1_type 104 178 0 307 333 60 28 chr2 129876328 129876474 -123380109 - MIR SINE MIR -73 135 32 218 301 55 0 chr2 129876806 129876879 -123379704 + L2 LINE L2 3188 3264 -8 213 344 75 0 chr2 129877771 129877864 -123378719 + MIR SINE MIR 80 179 -83 1421 191 77 19 chr2 129877940 129878264 -123378319 + MER2 DNA MER2_type 1 343 -1 460 372 32 12 chr2 129879111 129879361 -123377222 + MIR SINE MIR 8 262 0 654 223 0 0 chr2 129879962 129880083 -123376500 - FLAM_A SINE Alu -11 122 2 252 59 0 0 chr2 129880440 129880474 -123376109 + (A)n Simple_repeat Simple_repeat 1 34 0 2309 88 0 0 chr2 129880800 129881095 -123375488 + AluY SINE Alu 1 295 -16 388 228 20 59 chr2 129881871 129881972 -123374611 - Tigger7 DNA MER2_type 0 2491 2395 5350 150 33 5 chr2 129881983 129883070 -123373513 - L1MA4 LINE L1 -5 6295 5174 1488 179 3 24 chr2 129883068 129883365 -123373218 + L1MA4 LINE L1 4885 5175 -971 * 1468 219 0 7 chr2 129883375 129883644 -123372939 - Tigger7 DNA MER2_type -466 267 1 22 0 0 0 chr2 129883675 129883697 -123372886 + AT_rich Low_complexity Low_complexity 1 22 0 243 79 0 0 chr2 129884910 129884948 -123371635 + (TA)n Simple_repeat Simple_repeat 2 39 0 1949 126 18 7 chr2 129885507 129885810 -123370773 - AluSx SINE Alu 0 306 1 234 0 0 0 chr2 129886286 129886312 -123370271 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 24 0 0 0 chr2 129886996 129887020 -123369563 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr2 129887325 129887354 -123369229 + AT_rich Low_complexity Low_complexity 1 29 0 219 69 0 0 chr2 129887464 129887493 -123369090 + (CA)n Simple_repeat Simple_repeat 2 30 0 310 304 48 93 chr2 129887580 129888126 -123368457 + L1ME3A LINE L1 4100 4620 -1526 387 341 70 24 chr2 129888165 129888664 -123367919 + L1ME3A LINE L1 4634 5155 -991 645 306 88 21 chr2 129888789 129889347 -123367236 + L1ME3A LINE L1 5374 5950 -220 237 194 0 0 chr2 129889692 129889728 -123366855 + Tigger3(Golem) DNA MER2_type 2 37 -2992 722 202 65 65 chr2 129889728 129889976 -123366607 - L1MB1 LINE L1 -218 5971 5724 5385 235 36 3 chr2 129889986 129891419 -123365164 + L1 LINE L1 2922 4400 -1746 1243 281 67 45 chr2 129891977 129892557 -123364026 - MLT1E LTR MaLR 0 593 1 335 326 62 0 chr2 129892736 129892865 -123363718 - MIR SINE MIR -55 207 71 207 319 28 0 chr2 129893751 129893823 -123362760 + MIR SINE MIR 168 241 -21 496 193 0 0 chr2 129894185 129894304 -123362279 + L1MCa LINE L1 2351 2469 -3957 1776 135 4 0 chr2 129894311 129894570 -123362013 - AluSx SINE Alu -52 260 1 4758 14 2 0 chr2 129894626 129895570 -123361013 - L1PA2 LINE L1 -380 5775 4831 3313 13 0 0 chr2 129895570 129895946 -123360637 + L1PA2 LINE L1 5771 6146 -9 342 0 0 0 chr2 129895949 129895987 -123360596 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 902 203 157 8 chr2 129895996 129896065 -123360518 + L1MB1 LINE L1 5823 5880 -288 282 29 0 0 chr2 129896065 129896100 -123360483 + (CA)n Simple_repeat Simple_repeat 1 35 0 902 203 157 8 chr2 129896100 129896313 -123360270 + L1MB1 LINE L1 5880 6140 -28 3238 251 15 10 chr2 129896323 129897324 -123359259 + L1MCa LINE L1 2544 3549 -2877 336 287 0 0 chr2 129897396 129897483 -123359100 + HERVL LTR ERVL 4143 4229 -1535 416 81 0 8 chr2 129897498 129897562 -123359021 + L1PA8 LINE L1 6029 6107 -65 510 334 74 28 chr2 129897563 129898080 -123358503 + HERVL LTR ERVL 4226 4785 -724 791 87 61 0 chr2 129898591 129898706 -123357877 + L1PA8 LINE L1 6049 6170 -2 401 301 35 12 chr2 129898707 129898880 -123357703 - Charlie8 DNA MER1_type -2231 186 10 7267 119 106 112 chr2 129899508 129901212 -123355371 + pTR5 LTR ERV1 745 2438 0 28 29 0 0 chr2 129902412 129902447 -123354136 + AT_rich Low_complexity Low_complexity 1 35 0 2134 124 3 0 chr2 129903507 129903813 -123352770 + AluSp SINE Alu 1 307 -6 307 307 21 43 chr2 129904408 129904548 -123352035 + HAL1b LINE L1 1189 1325 -23 226 51 0 26 chr2 129906596 129906630 -123349953 + L1PA6 LINE L1 6112 6145 -5 423 0 0 0 chr2 129906630 129906677 -123349906 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 237 291 39 0 chr2 129906815 129906918 -123349665 + MER113 DNA MER1_type? 306 412 -109 21 0 0 0 chr2 129907037 129907058 -123349525 + AT_rich Low_complexity Low_complexity 1 21 0 1053 226 22 63 chr2 129907579 129907897 -123348686 - MLT1A1 LTR MaLR 0 365 61 1982 180 84 12 chr2 129907897 129908302 -123348281 - MLT2B2 LTR ERVL 0 515 82 336 191 48 0 chr2 129908368 129908452 -123348131 - MLT2B2 LTR ERVL -431 89 2 267 246 14 14 chr2 129908452 129908519 -123348064 - MLT1A1 LTR MaLR -307 67 1 903 166 117 0 chr2 129908667 129908872 -123347711 + L1MA6 LINE L1 6063 6291 -9 276 53 0 0 chr2 129909724 129909762 -123346821 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 331 271 76 21 chr2 129911221 129911365 -123345218 - MIR SINE MIR -78 184 33 1464 203 0 52 chr2 129911873 129912198 -123344385 + AluJo SINE Alu 1 308 -4 2219 92 0 0 chr2 129912360 129912692 -123343891 - AluSg SINE Alu 0 332 1 183 336 78 26 chr2 129913503 129913619 -123342964 + L2 LINE L2 3136 3257 -15 189 0 0 0 chr2 129913620 129913641 -123342942 + (TGAA)n Simple_repeat Simple_repeat 4 24 0 315 0 0 0 chr2 129913787 129913822 -123342761 + (TG)n Simple_repeat Simple_repeat 2 36 0 617 236 90 17 chr2 129913985 129914218 -123342365 - L1M4 LINE L1 -6291 251 2 21 0 0 0 chr2 129914637 129914658 -123341925 + AT_rich Low_complexity Low_complexity 1 21 0 183 80 0 0 chr2 129914947 129914972 -123341611 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 282 243 48 29 chr2 129914990 129915093 -123341490 + L1MCc LINE L1 277 381 -6042 27 29 0 0 chr2 129915470 129915504 -123341079 + AT_rich Low_complexity Low_complexity 1 34 0 654 283 82 61 chr2 129915616 129916507 -123340076 + L1MCc LINE L1 1593 2502 -4620 1960 125 0 0 chr2 129916554 129916826 -123339757 + AluSx SINE Alu 29 300 -12 651 194 21 21 chr2 129916840 129916984 -123339599 + L1PA12 LINE L1 7 150 -7431 22 0 0 0 chr2 129917004 129917026 -123339557 + AT_rich Low_complexity Low_complexity 1 22 0 2492 61 0 7 chr2 129917989 129918299 -123338284 - AluY SINE Alu -2 309 2 422 260 99 49 chr2 129918322 129918545 -123338038 - L1ME3A LINE L1 -9 6161 5928 * 1599 227 63 7 chr2 129918541 129918968 -123337615 + L1ME3A LINE L1 5447 5897 -277 24 53 0 0 chr2 129919276 129919314 -123337269 + AT_rich Low_complexity Low_complexity 1 38 0 3452 146 27 2 chr2 129919426 129920014 -123336569 + LTR26 LTR ERV1 1 603 0 276 328 120 0 chr2 129920908 129921033 -123335550 + L2 LINE L2 3125 3264 -8 23 68 0 0 chr2 129922382 129922426 -123334157 + AT_rich Low_complexity Low_complexity 1 44 0 433 331 12 18 chr2 129922711 129922880 -123333703 + MIR SINE MIR 37 204 -58 244 294 47 12 chr2 129922924 129923009 -123333574 - MIR SINE MIR -157 105 18 1943 147 112 25 chr2 129925109 129925349 -123331234 - MSTA LTR MaLR 0 428 139 2211 100 7 3 chr2 129925349 129925648 -123330935 + AluSc SINE Alu 1 300 -9 1943 147 112 25 chr2 129925648 129925801 -123330782 - MSTA LTR MaLR -289 139 1 3635 251 63 48 chr2 129925806 129926211 -123330372 - L1M4c LINE L1 -4136 2510 2112 8328 124 28 2 chr2 129926211 129927465 -123329118 - HSMAR1 DNA Mariner 0 1287 1 3635 251 63 48 chr2 129927465 129929051 -123327532 - L1M4c LINE L1 -4534 2112 507 30 0 0 0 chr2 129929120 129929150 -123327433 + AT_rich Low_complexity Low_complexity 1 30 0 35 0 0 0 chr2 129931357 129931392 -123325191 + AT_rich Low_complexity Low_complexity 1 35 0 425 332 102 37 chr2 129931553 129931797 -123324786 + MIR SINE MIR 3 262 0 247 375 23 23 chr2 129931971 129932099 -123324484 - MIR SINE MIR -121 141 14 241 286 29 38 chr2 129932527 129932632 -123323951 - L2 LINE L2 -206 3066 2963 973 269 98 21 chr2 129932769 129933155 -123323428 - MLT1F1 LTR MaLR 0 567 152 245 211 14 14 chr2 129933188 129933259 -123323324 - MER53 DNA DNA -14 175 105 565 219 73 20 chr2 129933423 129933574 -123323009 - MLT1F1 LTR MaLR -434 159 1 1076 202 123 74 chr2 129933693 129934025 -123322558 - MLT1B LTR MaLR 0 390 37 553 47 24 0 chr2 129934025 129934110 -123322473 + (TA)n Simple_repeat Simple_repeat 1 87 0 1076 202 123 74 chr2 129934110 129934144 -123322439 - MLT1B LTR MaLR -353 37 6 210 376 21 21 chr2 129935187 129935328 -123321255 + L2 LINE L2 2915 3055 -217 336 296 81 43 chr2 129935949 129936135 -123320448 + MLT1J LTR MaLR 66 258 -253 276 186 0 0 chr2 129936141 129936200 -123320383 + CT-rich Low_complexity Low_complexity 2 60 0 315 0 0 0 chr2 129936215 129936250 -123320333 + (TG)n Simple_repeat Simple_repeat 2 36 0 2211 118 0 13 chr2 129936271 129936584 -123319999 + AluSx SINE Alu 3 311 -1 1229 174 9 0 chr2 129937571 129937784 -123318799 + Tigger5 DNA MER2_type 2109 2323 0 431 250 42 25 chr2 129937929 129938049 -123318534 + MLT1E LTR MaLR 2 123 -470 385 298 0 72 chr2 129938617 129938798 -123317785 + L1MC4 LINE L1 6467 6634 -1408 1307 219 151 0 chr2 129938851 129939176 -123317407 - MSTD LTR MaLR -2 394 21 349 321 27 0 chr2 129939189 129939301 -123317282 + L1MC4a LINE L1 6614 6728 -1080 2022 135 13 0 chr2 129939334 129939638 -123316945 + AluSq SINE Alu 3 310 -3 2498 228 76 40 chr2 129939639 129940415 -123316168 + L1ME1 LINE L1 5317 6120 -46 357 209 45 27 chr2 129940354 129940464 -123316119 + L1MA10 LINE L1 6219 6330 -4 * 2355 253 97 38 chr2 129940575 129941781 -123314802 + L1ME2 LINE L1 4395 5529 -635 234 62 0 0 chr2 129941781 129941813 -123314770 + (CA)n Simple_repeat Simple_repeat 1 32 0 * 246 32 0 0 chr2 129941812 129941843 -123314740 + (GA)n Simple_repeat Simple_repeat 2 32 0 2355 253 97 38 chr2 129941813 129942303 -123314280 + L1ME2 LINE L1 5529 6162 -2 1025 290 37 23 chr2 129942333 129942768 -123313815 + L1ME3A LINE L1 5716 6156 -14 750 296 79 60 chr2 129942856 129943851 -123312732 + L1M4 LINE L1 3794 4807 -1339 35 0 0 0 chr2 129944143 129944178 -123312405 + AT_rich Low_complexity Low_complexity 1 35 0 4370 226 80 30 chr2 129944205 129945337 -123311246 - ERVL LTR ERVL -1904 3860 2673 1138 261 37 3 chr2 129946807 129947182 -123309401 - Charlie2 DNA MER1_type -1 2861 2474 2594 190 13 4 chr2 129947274 129947742 -123308841 - MER70B LTR ERVL -102 476 5 3804 5 2 0 chr2 129950040 129950471 -123306112 + L1PA2 LINE L1 5724 6155 0 220 217 21 25 chr2 129950551 129950655 -123305928 - MIR SINE MIR -66 142 40 309 294 118 44 chr2 129951480 129951663 -123304920 + MIR SINE MIR 57 251 -11 21 57 0 0 chr2 129951667 129951702 -123304881 + AT_rich Low_complexity Low_complexity 1 35 0 220 293 35 52 chr2 129951885 129952001 -123304582 + MIR SINE MIR 65 178 -84 800 229 27 5 chr2 129952249 129952437 -123304146 + MER20 DNA MER1_type 28 219 0 1970 224 51 35 chr2 129952526 129952873 -123303710 + MLT2B3 LTR ERVL 1 341 -213 2111 155 14 22 chr2 129952873 129953240 -123303343 + THE1B LTR MaLR 1 364 0 11648 98 4 1 chr2 129953240 129954815 -123301768 + THE1B-int LTR MaLR 1 1579 -1 2323 131 8 16 chr2 129954815 129955182 -123301401 + THE1B LTR MaLR 1 364 0 1970 224 51 35 chr2 129955182 129955322 -123301261 + MLT2B3 LTR ERVL 340 498 -56 207 204 0 0 chr2 129955324 129955373 -123301210 + (TA)n Simple_repeat Simple_repeat 2 50 0 1046 204 61 7 chr2 129955376 129955655 -123300928 + Tigger2a DNA MER2_type 25 318 -116 4470 125 24 93 chr2 129955655 129957133 -123299450 - pTR5 LTR ERV1 0 2606 1524 396 262 103 0 chr2 129957139 129957246 -123299337 + Tigger2a DNA MER2_type 325 442 -2 338 82 0 20 chr2 129957246 129957294 -123299289 + MLT2B3 LTR ERVL 469 515 0 426 286 16 37 chr2 129957571 129957760 -123298823 + MLT1I LTR MaLR 52 236 -173 3988 238 45 28 chr2 129958226 129959547 -123297036 - L1MD1 LINE L1 -15 6487 5122 524 164 57 0 chr2 129959547 129959669 -123296914 + L1MB7 LINE L1 6048 6176 -8 3988 238 45 28 chr2 129959669 129960034 -123296549 - L1MD1 LINE L1 -1380 5122 4765 233 53 53 0 chr2 129960034 129960072 -123296511 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 2377 111 8 0 chr2 129960076 129960429 -123296154 - L1PB1 LINE L1 -1 6150 5795 206 152 0 22 chr2 129960468 129960514 -123296069 + (TA)n Simple_repeat Simple_repeat 1 45 0 6287 179 13 21 chr2 129960514 129962479 -123294104 - L1PB1 LINE L1 -360 5791 3843 319 276 47 16 chr2 129962458 129962650 -123293933 - L1MD1 LINE L1 -1628 4518 4321 * 1394 282 21 0 chr2 129962648 129962985 -123293598 - L1MD1 LINE L1 -6054 355 12 1533 206 11 7 chr2 129964496 129964783 -123291800 + AluJo SINE Alu 1 288 -24 301 300 12 12 chr2 129965231 129965311 -123291272 - MIR3 SINE MIR -44 164 85 841 187 19 59 chr2 129965594 129965812 -123290771 - MER20 DNA MER1_type -2 217 14 269 364 31 0 chr2 129966845 129966974 -123289609 - MIR3 SINE MIR -7 201 69 1622 181 35 3 chr2 129967067 129967354 -123289229 + AluJo SINE Alu 1 296 -16 209 214 0 60 chr2 129967458 129967542 -123289041 + A-rich Low_complexity Low_complexity 1 79 0 21 110 0 0 chr2 129968118 129968209 -123288374 + AT_rich Low_complexity Low_complexity 1 91 0 5994 102 38 4 chr2 129968210 129969254 -123287329 - L1PB1 LINE L1 -6 6145 5069 537 240 7 7 chr2 129969239 129969389 -123287194 + L1PB1 LINE L1 4927 5076 -1070 * 5954 147 30 24 chr2 129969609 129971765 -123284818 - L1MA6 LINE L1 0 6300 4128 429 345 34 43 chr2 129972532 129972767 -123283816 - MIR SINE MIR -28 234 2 188 246 131 0 chr2 129973513 129973574 -123283009 - L2 LINE L2 -44 3228 3160 3544 209 19 43 chr2 129973908 129974894 -123281689 - L1MB4 LINE L1 0 6180 5219 538 144 51 42 chr2 129974894 129975012 -123281571 + LTR9B LTR ERV1 442 560 -84 1964 232 81 51 chr2 129975042 129975145 -123281438 - L1MB4 LINE L1 -917 5229 5130 198 0 0 0 chr2 129975145 129975167 -123281416 + (TTA)n Simple_repeat Simple_repeat 3 24 0 2119 20 0 0 chr2 129975167 129975411 -123281172 - L1PA4 LINE L1 -18 6137 5894 1964 232 81 51 chr2 129975411 129975593 -123280990 - L1MB4 LINE L1 -1016 5130 4955 2403 151 62 0 chr2 129975593 129975996 -123280587 - MSTA LTR MaLR 0 428 1 1964 232 81 51 chr2 129975996 129976528 -123280055 - L1MB4 LINE L1 -1191 4955 4386 7517 175 27 32 chr2 129976535 129976758 -123279825 - L1PA15 LINE L1 -8 7595 7373 1793 157 7 14 chr2 129976758 129977052 -123279531 - AluSg SINE Alu -18 292 1 7517 175 27 32 chr2 129977052 129977236 -123279347 - L1PA15 LINE L1 -230 7373 7190 2203 121 0 16 chr2 129977236 129977551 -123279032 - AluSx SINE Alu -2 310 1 7517 175 27 32 chr2 129977551 129979529 -123277054 - L1PA15 LINE L1 -413 7190 5221 1123 176 5 9 chr2 129979531 129979752 -123276831 - L1PA15 LINE L1 -4552 3029 2810 4230 191 22 10 chr2 129979794 129982187 -123274396 - L1MA1 LINE L1 0 7721 5360 1667 176 47 33 chr2 129982187 129982546 -123274037 - THE1B LTR MaLR 0 364 1 4230 191 22 10 chr2 129982546 129983129 -123273454 - L1MA1 LINE L1 -2361 5360 4548 7063 45 2 0 chr2 129983129 129984346 -123272237 - L1PA5 LINE L1 -6 6148 4922 4230 191 22 10 chr2 129984346 129984442 -123272141 - L1MA1 LINE L1 -3173 4548 4455 3832 144 52 13 chr2 129984431 129985183 -123271400 - L1MA1 LINE L1 -4108 3457 2677 * 2446 254 86 89 chr2 129985179 129986836 -123269747 - L1M4c LINE L1 -4702 1682 31 * 1334 199 76 4 chr2 129987440 129987722 -123268861 - AluJb SINE Alu 0 301 1 211 262 135 48 chr2 129988535 129988661 -123267922 - L2 LINE L2 -5 3308 3172 2355 170 91 10 chr2 129988951 129989468 -123267115 + L1MA4 LINE L1 5728 6286 -14 219 146 37 37 chr2 129989937 129990019 -123266564 + (TTA)n Simple_repeat Simple_repeat 3 84 0 345 305 125 25 chr2 129990106 129990484 -123266099 + L1MCc LINE L1 19 943 -5998 736 250 126 52 chr2 129991050 129991863 -123264720 + L1MCc LINE L1 1223 2077 -4864 1028 339 37 5 chr2 129992036 129992470 -123264113 + L1M2 LINE L1 1 448 -6401 1188 226 11 42 chr2 129993472 129993737 -123262846 + L1PA16 LINE L1 477 733 -6116 10487 243 31 46 chr2 129994227 129995017 -123261566 + L1PA16 LINE L1 1571 2371 -4498 218 81 27 0 chr2 129995017 129995054 -123261529 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 10487 243 31 46 chr2 129995054 129995708 -123260875 + L1PA16 LINE L1 2371 3033 -3836 2202 95 0 10 chr2 129995708 129996003 -123260580 + AluY SINE Alu 1 292 -19 10487 243 31 46 chr2 129996003 129999882 -123256701 + L1PA16 LINE L1 3033 6857 -12 1131 192 5 34 chr2 129999888 130000096 -123256487 + AluJo SINE Alu 7 208 -104 2201 227 77 32 chr2 130000097 130000865 -123255718 + L1MB8 LINE L1 4615 5417 -744 965 299 60 15 chr2 130000867 130001265 -123255318 - LTR52 LTR ERVL -5 416 1 1558 243 43 0 chr2 130001265 130001660 -123254923 + L1MB8 LINE L1 5419 5830 -354 975 241 27 22 chr2 130001683 130001907 -123254676 + MER8 DNA MER2_type 14 238 -1 1498 193 51 9 chr2 130001912 130002243 -123254340 + L1MB8 LINE L1 5831 6175 -3 606 247 50 5 chr2 130002244 130002463 -123254120 + L1ME1 LINE L1 4942 5170 -976 1806 233 75 20 chr2 130002478 130003065 -123253518 + L1ME1 LINE L1 5530 6148 -18 881 247 113 0 chr2 130003108 130003400 -123253183 + L1MD3 LINE L1 7671 7995 0 1608 220 70 39 chr2 130003516 130003976 -123252607 + MLT1D LTR MaLR 30 503 -2 329 67 0 0 chr2 130004047 130004092 -123252491 - MADE1 DNA Mariner -34 46 2 720 190 7 7 chr2 130004203 130004340 -123252243 + FRAM SINE Alu 1 137 -39 196 273 91 61 chr2 130005285 130005417 -123251166 + MIR SINE MIR 49 184 -78 23 33 0 0 chr2 130006141 130006171 -123250412 + AT_rich Low_complexity Low_complexity 1 30 0 1695 189 0 3 chr2 130007324 130007615 -123248968 - AluJb SINE Alu -22 290 1 2077 106 0 49 chr2 130008026 130008355 -123248228 - AluSp SINE Alu 0 313 1 223 358 0 11 chr2 130008357 130008452 -123248131 + MIR3 SINE MIR 97 190 -18 184 238 12 12 chr2 130008622 130008702 -123247881 + CT-rich Low_complexity Low_complexity 2 81 0 353 286 94 35 chr2 130009741 130010059 -123246524 - HAL1 LINE L1 -92 2415 2079 21 0 0 0 chr2 130010522 130010543 -123246040 + AT_rich Low_complexity Low_complexity 1 21 0 243 83 56 0 chr2 130010563 130010599 -123245984 - MIR SINE MIR -9 253 216 2445 53 30 0 chr2 130011169 130011470 -123245113 + AluY SINE Alu 1 310 -1 21 0 0 0 chr2 130012004 130012025 -123244558 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 130012398 130012421 -123244162 + AT_rich Low_complexity Low_complexity 1 23 0 207 0 0 0 chr2 130012861 130012884 -123243699 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 339 293 0 0 chr2 130013996 130014095 -123242488 - L1M4 LINE L1 -1205 4941 4843 244 240 0 0 chr2 130014393 130014443 -123242140 + L2 LINE L2 3262 3311 -2 22 0 0 0 chr2 130015256 130015278 -123241305 + AT_rich Low_complexity Low_complexity 1 22 0 275 318 73 18 chr2 130015333 130015443 -123241140 + MIR SINE MIR 80 195 -67 559 318 112 0 chr2 130015495 130015791 -123240792 - LTR16A LTR ERVL -2 448 120 2230 102 3 0 chr2 130017316 130017611 -123238972 + AluSp SINE Alu 1 296 -17 24 0 0 0 chr2 130018092 130018116 -123238467 + AT_rich Low_complexity Low_complexity 1 24 0 337 139 12 12 chr2 130019415 130019501 -123237082 + (TA)n Simple_repeat Simple_repeat 2 87 0 1971 136 3 0 chr2 130019502 130019789 -123236794 - AluSx SINE Alu -24 288 1 322 361 90 7 chr2 130019998 130020142 -123236441 - LTR16C LTR ERVL -166 325 170 2141 129 0 0 chr2 130020931 130021225 -123235358 + AluSq SINE Alu 3 296 -17 245 186 14 0 chr2 130021819 130021889 -123234694 + (TG)n Simple_repeat Simple_repeat 1 71 0 22 70 0 0 chr2 130022716 130022759 -123233824 + AT_rich Low_complexity Low_complexity 1 43 0 10745 234 25 82 chr2 130023244 130024347 -123232236 + L1PA16 LINE L1 1361 2525 -4292 1795 169 4 0 chr2 130024347 130024786 -123231797 - AluSx SINE Alu 0 442 3 10745 234 25 82 chr2 130024786 130027499 -123229084 + L1PA16 LINE L1 2525 5150 -1667 1995 161 84 25 chr2 130027499 130027891 -123228692 - MSTA LTR MaLR -12 416 2 10745 234 25 82 chr2 130027891 130029470 -123227113 + L1PA16 LINE L1 5150 6817 0 978 210 42 25 chr2 130029822 130030060 -123226523 - MER39 LTR ERV1 -20 687 446 393 319 76 0 chr2 130030092 130030249 -123226334 - HAL1 LINE L1 -842 1665 1497 309 256 44 58 chr2 130030489 130030626 -123225957 + MIR SINE MIR 30 144 -64 21 0 0 0 chr2 130030798 130030819 -123225764 + AT_rich Low_complexity Low_complexity 1 21 0 202 143 0 24 chr2 130030940 130030982 -123225601 + (TAAAAA)n Simple_repeat Simple_repeat 4 44 0 955 227 99 0 chr2 130032071 130032313 -123224270 + LTR48B LTR ERV1 7 272 -372 293 243 140 0 chr2 130032306 130032413 -123224170 + LTR48B LTR ERV1 457 578 -66 * 188 250 0 58 chr2 130032567 130032619 -123223964 - L2 LINE L2 -9 3263 3215 * 270 261 124 92 chr2 130032608 130032761 -123223822 - MIR SINE MIR -29 233 76 25 31 0 0 chr2 130033351 130033383 -123223200 + AT_rich Low_complexity Low_complexity 1 32 0 346 333 27 27 chr2 130033534 130033681 -123222902 + MLT1F1 LTR MaLR 11 157 -385 1448 256 79 32 chr2 130033682 130034038 -123222545 - LTR26B LTR ERV1 0 531 142 2179 110 107 13 chr2 130034038 130034429 -123222154 + MSTA LTR MaLR 1 428 0 1448 256 79 32 chr2 130034429 130034579 -123222004 - LTR26B LTR ERV1 -389 142 1 944 234 102 21 chr2 130034611 130034938 -123221645 + MLT1F1 LTR MaLR 178 564 -3 300 259 148 66 chr2 130035682 130035884 -123220699 - MIR SINE MIR -48 214 4 23 0 0 0 chr2 130036233 130036256 -123220327 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr2 130036390 130036422 -123220161 + AT_rich Low_complexity Low_complexity 1 32 0 2470 64 3 0 chr2 130037286 130037583 -123219000 - AluY SINE Alu -13 298 1 254 29 29 0 chr2 130037661 130037696 -123218887 + (CA)n Simple_repeat Simple_repeat 1 36 0 25 31 0 0 chr2 130037940 130037972 -123218611 + AT_rich Low_complexity Low_complexity 1 32 0 198 0 0 0 chr2 130038347 130038369 -123218214 + (TCTG)n Simple_repeat Simple_repeat 1 22 0 313 326 94 22 chr2 130038623 130038761 -123217822 - L2 LINE L2 -1 3271 3124 210 378 76 17 chr2 130038992 130039164 -123217419 - L2 LINE L2 -566 2748 2567 386 311 116 20 chr2 130039335 130039586 -123216997 - L2 LINE L2 -874 2440 2166 2350 83 0 29 chr2 130039957 130040271 -123216312 + AluY SINE Alu 1 305 -6 352 319 31 38 chr2 130040296 130040456 -123216127 + MIR SINE MIR 54 212 -50 614 228 166 9 chr2 130041261 130041561 -123215022 - MER20B DNA MER1_type -192 591 198 231 218 18 18 chr2 130041614 130041669 -123214914 + MLT1J1 LTR MaLR 42 96 -350 731 333 106 14 chr2 130041738 130042182 -123214401 - LTR33 LTR ERVL 0 521 37 715 219 38 11 chr2 130042269 130042452 -123214131 + MER5A DNA MER1_type 2 189 0 326 336 19 66 chr2 130042840 130043051 -123213532 + L2 LINE L2 1427 1627 -1687 783 310 102 41 chr2 130043260 130043918 -123212665 + L2 LINE L2 1889 2586 -728 459 311 55 98 chr2 130043915 130044407 -123212176 + L2 LINE L2 2842 3312 -1 * 363 312 158 23 chr2 130045230 130045445 -123211138 - MIR SINE MIR 0 262 19 190 304 64 40 chr2 130046855 130046980 -123209603 - MIR SINE MIR -130 132 5 725 234 5 0 chr2 130048305 130048497 -123208086 + L1MA4 LINE L1 6106 6298 -2 271 408 70 0 chr2 130048658 130048815 -123207768 + MIR SINE MIR 8 175 -87 347 299 92 29 chr2 130049355 130049529 -123207054 - MER5A DNA MER1_type -3 186 2 228 385 51 26 chr2 130049735 130049930 -123206653 - MIR SINE MIR -44 218 19 188 356 103 40 chr2 130051339 130051513 -123205070 + MIR SINE MIR 12 196 -66 183 80 0 0 chr2 130051566 130051591 -123204992 + (TTA)n Simple_repeat Simple_repeat 2 26 0 264 255 88 59 chr2 130052375 130052477 -123204106 + L2 LINE L2 3208 3312 -1 1586 185 7 0 chr2 130052805 130053091 -123203492 + AluJo SINE Alu 3 290 -22 254 66 79 13 chr2 130053158 130053234 -123203349 + (CATAA)n Simple_repeat Simple_repeat 4 84 0 185 117 67 0 chr2 130053814 130053874 -123202709 + (CATAA)n Simple_repeat Simple_repeat 1 64 0 195 114 0 0 chr2 130054534 130054569 -123202014 + (CATA)n Simple_repeat Simple_repeat 2 36 0 256 159 16 16 chr2 130055225 130055288 -123201295 + GA-rich Low_complexity Low_complexity 1 63 0 253 236 49 81 chr2 130056293 130056416 -123200167 + L2 LINE L2 3140 3258 -55 218 189 0 0 chr2 130057495 130057532 -123199051 + (CTTTG)n Simple_repeat Simple_repeat 3 39 0 427 128 18 101 chr2 130057651 130057760 -123198823 + Tigger4(Zombi) DNA MER2_type 2632 2731 0 228 200 0 0 chr2 130057762 130057817 -123198766 + (TG)n Simple_repeat Simple_repeat 2 56 0 302 322 14 34 chr2 130058318 130058464 -123198119 + MIR SINE MIR 5 147 -115 570 266 131 45 chr2 130058495 130058807 -123197776 - L2 LINE L2 -2 3311 2973 232 347 60 30 chr2 130059106 130059273 -123197310 + MIR SINE MIR 28 199 -63 204 326 105 0 chr2 130060762 130060857 -123195726 - MIR3 SINE MIR -37 171 67 25 31 0 0 chr2 130061027 130061059 -123195524 + AT_rich Low_complexity Low_complexity 1 32 0 27 0 0 0 chr2 130061310 130061337 -123195246 + AT_rich Low_complexity Low_complexity 1 27 0 187 250 118 40 chr2 130061344 130061420 -123195163 + L2 LINE L2 2528 2609 -705 426 231 70 35 chr2 130061518 130061661 -123194922 + MER103 DNA DNA 12 159 -7 2103 125 3 7 chr2 130062076 130062380 -123194203 - AluSg SINE Alu -7 303 1 26 50 0 0 chr2 130063453 130063493 -123193090 + AT_rich Low_complexity Low_complexity 1 40 0 357 120 0 0 chr2 130063818 130063868 -123192715 + THE1C LTR MaLR 1 50 -325 1816 157 7 0 chr2 130063868 130064149 -123192434 - MLT2A2 LTR ERVL -165 288 6 209 275 0 0 chr2 130064151 130064191 -123192392 + L2 LINE L2 3252 3291 -22 354 80 0 0 chr2 130064238 130064288 -123192295 + (TC)n Simple_repeat Simple_repeat 2 51 0 1934 184 8 8 chr2 130064305 130064659 -123191924 - MER47A DNA MER2_type 0 366 13 211 120 20 40 chr2 130064710 130064760 -123191823 + (CATA)n Simple_repeat Simple_repeat 4 52 0 236 288 0 25 chr2 130064788 130064868 -123191715 + (CATATA)n Simple_repeat Simple_repeat 3 80 0 2194 198 56 109 chr2 130065864 130066628 -123189955 - LTR8A LTR ERV1 0 727 4 384 191 168 35 chr2 130067114 130067287 -123189296 - MER69 DNA AcHobo -10 2516 2321 443 318 144 10 chr2 130067334 130067535 -123189048 - MER69 DNA AcHobo -2296 230 3 2326 61 0 17 chr2 130068206 130068541 -123188042 + AluY SINE Alu 1 330 0 216 271 43 0 chr2 130068679 130068749 -123187834 - L2 LINE L2 -4 3309 3237 206 273 0 23 chr2 130068855 130068899 -123187684 - L2 LINE L2 -205 3067 3025 3113 72 5 5 chr2 130069007 130069438 -123187145 + L1PA8 LINE L1 5742 6172 0 450 328 68 43 chr2 130069515 130069838 -123186745 - L2 LINE L2 -679 2635 2305 1425 247 60 6 chr2 130069843 130070370 -123186213 + MER82 DNA MER2_type 1 653 0 781 284 74 60 chr2 130070370 130070936 -123185647 - L2 LINE L2 -1029 2285 1712 516 260 67 0 chr2 130071003 130071153 -123185430 - MER110 LTR ERV1 -20 471 312 988 271 20 17 chr2 130071231 130071537 -123185046 + MLT1E LTR MaLR 356 593 0 257 254 191 0 chr2 130071537 130071663 -123184920 + L1M4 LINE L1 3629 3778 -2368 660 282 59 49 chr2 130071791 130072281 -123184302 + L1M4 LINE L1 4085 4579 -1567 231 36 0 0 chr2 130073452 130073480 -123183103 + (CA)n Simple_repeat Simple_repeat 2 29 0 330 26 0 0 chr2 130073852 130073891 -123182692 + (CA)n Simple_repeat Simple_repeat 2 40 0 237 253 11 88 chr2 130074208 130074299 -123182284 - L1M4 LINE L1 -1988 4158 4075 368 333 80 35 chr2 130075303 130075440 -123181143 - L1M4 LINE L1 -3102 3044 2915 1454 192 6 32 chr2 130075440 130075753 -123180830 - AluJo SINE Alu -7 305 1 368 333 80 35 chr2 130075753 130076039 -123180544 - L1M4 LINE L1 -3231 2915 2602 6898 200 13 29 chr2 130076158 130078511 -123178072 - L1PB4 LINE L1 -121 6035 3715 226 305 31 55 chr2 130080148 130080276 -123176307 - MIR SINE MIR -73 189 65 1284 188 18 0 chr2 130080512 130080730 -123175853 + MER2 DNA MER2_type 1 222 -123 1024 176 14 72 chr2 130080730 130080923 -123175660 + AluJb SINE Alu 80 283 -29 2482 131 0 18 chr2 130080923 130081305 -123175278 + THE1C LTR MaLR 1 375 0 9330 141 16 28 chr2 130081305 130082904 -123173679 + THE1C-int LTR MaLR 1 1579 -1 2496 111 5 41 chr2 130082905 130083241 -123173342 + THE1C LTR MaLR 1 323 -52 1915 99 0 0 chr2 130083241 130083493 -123173090 + AluY SINE Alu 47 298 -13 2496 111 5 41 chr2 130083493 130083545 -123173038 + THE1C LTR MaLR 323 375 0 1024 176 14 72 chr2 130083545 130083570 -123173013 + AluJb SINE Alu 281 288 -24 1848 146 28 0 chr2 130083614 130083901 -123172682 + AluSg SINE Alu 5 299 -11 245 291 0 0 chr2 130083953 130084008 -123172575 + MER2 DNA MER2_type 291 345 0 1756 168 8 5 chr2 130084562 130084927 -123171656 - Tigger4(Zombi) DNA MER2_type 0 2731 1 22 35 0 0 chr2 130085025 130085054 -123171529 + AT_rich Low_complexity Low_complexity 1 29 0 810 242 83 4 chr2 130085456 130085734 -123170849 - MER33 DNA MER1_type -32 292 1 189 0 0 0 chr2 130086873 130086894 -123169689 + (A)n Simple_repeat Simple_repeat 1 21 0 239 337 125 0 chr2 130086964 130087148 -123169435 + MIR3 SINE MIR 1 207 -1 486 200 270 4 chr2 130087862 130088009 -123168574 - MER33 DNA MER1_type -2263 361 254 180 77 0 0 chr2 130088009 130088035 -123168548 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 486 200 270 4 chr2 130088035 130088124 -123168459 - MER33 DNA MER1_type -2370 254 26 390 295 41 0 chr2 130088841 130088963 -123167620 + L2 LINE L2 3187 3313 0 21 0 0 0 chr2 130090174 130090195 -123166388 + AT_rich Low_complexity Low_complexity 1 21 0 44 63 0 0 chr2 130091487 130091566 -123165017 + AT_rich Low_complexity Low_complexity 1 79 0 648 214 0 8 chr2 130091699 130091825 -123164758 - FLAM_C SINE Alu -6 137 13 39 22 0 0 chr2 130091831 130091877 -123164706 + AT_rich Low_complexity Low_complexity 1 46 0 2047 134 48 28 chr2 130092046 130092403 -123164180 - THE1B LTR MaLR 0 364 1 1951 180 0 0 chr2 130093082 130093572 -123163011 - L1PB1 LINE L1 -713 5438 4949 4659 102 19 0 chr2 130093573 130093904 -123162679 + L1PB1 LINE L1 5450 5773 -424 246 62 0 0 chr2 130093904 130093936 -123162647 + (CA)n Simple_repeat Simple_repeat 2 33 0 4659 102 19 0 chr2 130093936 130094339 -123162244 + L1PB1 LINE L1 5773 6197 0 2722 155 48 24 chr2 130094861 130095441 -123161142 + L1MA8 LINE L1 5692 6285 -6 1366 235 97 19 chr2 130095842 130096357 -123160226 - Charlie2 DNA MER1_type -146 2716 2162 809 275 34 6 chr2 130096355 130096682 -123159901 - Charlie2b DNA MER1_type -1511 1271 936 * 1333 205 91 0 chr2 130096710 130096973 -123159610 - AluJo SINE Alu -25 287 1 818 310 33 73 chr2 130096975 130097401 -123159182 - Charlie2b DNA MER1_type -1842 940 532 1850 120 4 0 chr2 130097566 130097816 -123158767 - AluSq SINE Alu -62 251 1 559 295 71 51 chr2 130097818 130098425 -123158158 - L1M4 LINE L1 -1949 4197 3579 828 263 56 72 chr2 130098515 130098858 -123157725 - L1M4 LINE L1 -2791 3355 3008 468 185 25 17 chr2 130098858 130098977 -123157606 - L1MA4 LINE L1 0 6300 6181 828 263 56 72 chr2 130098977 130099012 -123157571 - L1M4 LINE L1 -3138 3008 2974 1916 132 35 3 chr2 130099012 130099300 -123157283 + AluSg SINE Alu 3 299 -11 828 263 56 72 chr2 130099300 130099586 -123156997 - L1M4 LINE L1 -3172 2974 2701 186 303 45 15 chr2 130099737 130099803 -123156780 - MER5A DNA MER1_type -87 102 35 1719 157 109 9 chr2 130099831 130100162 -123156421 + THE1B LTR MaLR 1 364 0 5507 115 27 6 chr2 130100162 130101022 -123155561 + THE1B-int LTR MaLR 1 878 -702 * 24264 101 15 7 chr2 130101010 130105611 -123150972 + L1PA7 LINE L1 1501 6143 -11 4893 120 3 3 chr2 130105639 130106363 -123150220 + THE1B-int LTR MaLR 857 1580 0 1880 161 51 20 chr2 130106363 130106716 -123149867 + THE1B LTR MaLR 1 364 0 236 303 90 0 chr2 130107281 130107370 -123149213 + LTR33 LTR ERVL 342 438 -83 227 283 131 14 chr2 130107463 130107608 -123148975 + L2 LINE L2 2747 2908 -406 336 272 58 10 chr2 130108551 130108654 -123147929 + MIR SINE MIR 53 160 -102 1115 189 56 8 chr2 130108862 130109111 -123147472 - MSTD LTR MaLR 0 396 136 4420 107 52 3 chr2 130109425 130110081 -123146502 + LTR12 LTR ERV1 1 688 0 2237 101 0 19 chr2 130110977 130111294 -123145289 - AluY SINE Alu 0 311 1 283 287 43 12 chr2 130112277 130112441 -123144142 + (TA)n Simple_repeat Simple_repeat 1 169 0 280 343 86 0 chr2 130112671 130112811 -123143772 + MIR SINE MIR 76 227 -35 237 340 47 0 chr2 130113730 130113836 -123142747 + L2 LINE L2 3203 3313 0 4170 244 90 16 chr2 130113886 130114763 -123141820 - L1ME1 LINE L1 -6 6396 5585 2017 178 73 20 chr2 130114763 130115201 -123141382 - LOR1b LTR ERV1 0 461 1 4170 244 90 16 chr2 130115201 130116513 -123140070 - L1ME1 LINE L1 -817 5585 4054 272 142 0 13 chr2 130116542 130116605 -123139978 - L1MA6 LINE L1 -2 6298 6230 704 146 9 9 chr2 130116755 130116865 -123139718 + FLAM_C SINE Alu 14 123 -20 26 64 0 0 chr2 130116892 130116939 -123139644 + AT_rich Low_complexity Low_complexity 1 47 0 371 282 58 0 chr2 130117257 130117360 -123139223 - L2 LINE L2 -7 3265 3157 391 244 53 38 chr2 130117993 130118124 -123138459 - L2 LINE L2 -1 3312 3180 2150 95 18 0 chr2 130118348 130118631 -123137952 + AluSp SINE Alu 1 288 -25 228 286 57 19 chr2 130121311 130121416 -123135167 - MER5C DNA MER1_type -200 124 16 3328 139 16 13 chr2 130121420 130121973 -123134610 + LTR38 LTR ERV1 1 555 -1 279 0 0 0 chr2 130122390 130122421 -123134162 + (CA)n Simple_repeat Simple_repeat 2 32 0 216 67 0 0 chr2 130122872 130122902 -123133681 + (CA)n Simple_repeat Simple_repeat 2 31 0 1003 225 43 88 chr2 130123726 130124521 -123132062 - L1ME1 LINE L1 -3574 2808 2044 320 262 58 0 chr2 130124521 130124624 -123131959 - MER82 DNA MER2_type -4 649 541 390 21 0 0 chr2 130124788 130124835 -123131748 + (TA)n Simple_repeat Simple_repeat 1 47 0 466 211 67 10 chr2 130126086 130126190 -123130393 - L2 LINE L2 0 3313 3204 583 292 45 53 chr2 130128278 130128635 -123127948 + L2 LINE L2 2710 3068 -245 354 246 74 0 chr2 130130304 130130426 -123126157 - MLT1B LTR MaLR -5 385 255 1955 115 0 22 chr2 130130563 130130833 -123125750 + AluSc SINE Alu 15 278 -31 620 257 35 92 chr2 130130847 130131162 -123125421 - L2 LINE L2 -15 3298 3002 435 330 57 0 chr2 130133074 130133268 -123123315 + L1ME LINE L1 5537 5741 -380 545 248 140 16 chr2 130133440 130133747 -123122836 - L1ME4a LINE L1 -119 6002 5658 33 25 0 0 chr2 130133748 130133788 -123122795 + AT_rich Low_complexity Low_complexity 1 40 0 1285 189 31 28 chr2 130134544 130134798 -123121785 + AluJo SINE Alu 21 275 -37 480 285 50 56 chr2 130137958 130138137 -123118446 + MIR3 SINE MIR 30 207 -1 287 314 0 20 chr2 130138534 130138636 -123117947 + MIR SINE MIR 158 257 -5 272 200 14 0 chr2 130138859 130138929 -123117654 + CT-rich Low_complexity Low_complexity 2 72 0 427 251 12 24 chr2 130139156 130139174 -123117409 - L1MA10 LINE L1 -1 6333 6316 795 251 44 25 chr2 130139174 130139449 -123117134 - L1ME1 LINE L1 -7 6159 5880 400 327 59 14 chr2 130140728 130140948 -123115635 + L2 LINE L2 2160 2389 -925 440 342 58 32 chr2 130141139 130141329 -123115254 + MER91A DNA MER1_type 2 196 0 1943 141 0 23 chr2 130142037 130142342 -123114241 - AluSx SINE Alu -14 298 1 859 261 70 78 chr2 130142613 130143100 -123113483 - MLT1J LTR MaLR -3 508 26 2364 94 0 0 chr2 130144131 130144438 -123112145 - AluY SINE Alu -4 307 1 2177 148 83 16 chr2 130144441 130144875 -123111708 - MLT1C LTR MaLR 0 467 5 27 29 0 0 chr2 130145049 130145083 -123111500 + AT_rich Low_complexity Low_complexity 1 34 0 2303 83 0 10 chr2 130145726 130146027 -123110556 - AluSq SINE Alu -15 298 1 307 222 126 30 chr2 130146635 130146802 -123109781 + Charlie4a DNA MER1_type 161 343 -165 211 267 64 99 chr2 130147646 130147818 -123108765 + MIR3 SINE MIR 28 193 -15 194 178 44 22 chr2 130147932 130147977 -123108606 + L2 LINE L2 3216 3261 -11 593 312 56 29 chr2 130148936 130149276 -123107307 - L1M4 LINE L1 -1435 4711 4363 374 121 0 15 chr2 130150516 130150582 -123106001 + L1PA7 LINE L1 6083 6147 -7 1737 158 13 23 chr2 130151275 130151578 -123105005 - AluJo SINE Alu -12 300 1 2206 123 0 0 chr2 130151644 130151944 -123104639 - AluY SINE Alu -11 300 1 694 164 18 0 chr2 130152075 130152185 -123104398 - FLAM_A SINE Alu -30 112 1 598 197 67 58 chr2 130154945 130155121 -123101462 - L1ME3 LINE L1 -3 6159 5979 2949 85 52 5 chr2 130155121 130155545 -123101038 - MLT2A1 LTR ERVL 0 444 1 598 197 67 58 chr2 130155545 130155576 -123101007 - L1ME3 LINE L1 -183 5979 5950 2216 57 0 14 chr2 130155727 130156048 -123100535 - AluY SINE Alu 0 319 3 212 340 113 0 chr2 130156102 130156208 -123100375 - L2 LINE L2 -236 3036 2919 506 100 295 26 chr2 130156591 130156781 -123099802 - AluSc SINE Alu -19 290 50 921 228 72 17 chr2 130157493 130157730 -123098853 + MIR SINE MIR 2 251 -11 873 254 87 49 chr2 130157741 130158131 -123098452 + MLT1I LTR MaLR 5 409 0 1205 207 75 21 chr2 130158203 130158483 -123098100 + Charlie1a DNA MER1_type 8 302 -1153 516 143 0 107 chr2 130158483 130158595 -123097988 + MER2 DNA MER2_type 2 101 -244 270 244 65 24 chr2 130158596 130158719 -123097864 + FLAM_C SINE Alu 2 129 -4 180 292 45 56 chr2 130158934 130159023 -123097560 + MIR SINE MIR 44 131 -131 200 300 0 0 chr2 130159133 130159183 -123097400 + L2 LINE L2 3213 3262 -10 1149 208 104 19 chr2 130159738 130160056 -123096527 + MLT1A1 LTR MaLR 1 345 -20 845 193 6 0 chr2 130161039 130161200 -123095383 + MER58B DNA MER1_type 169 330 -11 2347 79 0 0 chr2 130162278 130162568 -123094015 - AluY SINE Alu -19 292 3 2452 162 113 4 chr2 130162977 130163489 -123093094 + L1MB3 LINE L1 5615 6182 -1 204 250 0 50 chr2 130164050 130164110 -123092473 - MIR SINE MIR -92 170 114 185 276 219 41 chr2 130164077 130164200 -123092383 - MIR3 SINE MIR -61 147 3 * 990 172 98 23 chr2 130165672 130165887 -123090696 + MER46A DNA MER2_type 3 233 -3 536 196 110 55 chr2 130166532 130166695 -123089888 - MSTD LTR MaLR -50 346 175 40 16 0 32 chr2 130167119 130167158 -123089425 + AT_rich Low_complexity Low_complexity 1 39 -21 1558 193 7 7 chr2 130167158 130167438 -123089145 - AluJo SINE Alu -32 280 1 40 16 0 32 chr2 130167438 130167460 -123089123 + AT_rich Low_complexity Low_complexity 39 60 0 488 257 37 27 chr2 130167467 130167654 -123088929 - LTR33 LTR ERVL -4 517 329 256 300 14 0 chr2 130167877 130167947 -123088636 + L2 LINE L2 3202 3272 0 231 114 0 0 chr2 130168487 130168522 -123088061 + (T)n Simple_repeat Simple_repeat 1 35 0 5558 125 20 16 chr2 130168635 130169594 -123086989 + L1MC1 LINE L1 5371 6333 0 1851 149 44 54 chr2 130169607 130169997 -123086586 - MLT1B LTR MaLR -2 388 3 718 260 93 39 chr2 130170042 130170449 -123086134 + LTR1B LTR ERV1 44 472 -354 1194 98 192 0 chr2 130171211 130171404 -123085179 - MER30 DNA MER1_type 0 230 1 22 0 0 0 chr2 130171437 130171459 -123085124 + AT_rich Low_complexity Low_complexity 1 22 0 249 296 174 0 chr2 130171459 130171557 -123085026 + L2 LINE L2 2271 2385 -929 297 298 101 48 chr2 130171584 130171752 -123084831 - MIR SINE MIR -75 187 11 394 354 72 40 chr2 130172185 130172462 -123084121 + L2 LINE L2 2986 3271 -1 1180 76 134 0 chr2 130172826 130172997 -123083586 + AluSx SINE Alu 1 194 -118 2130 166 11 6 chr2 130175792 130176154 -123080429 + MLT1A1 LTR MaLR 1 364 -1 283 177 0 16 chr2 130176318 130176380 -123080203 - L1PA16 LINE L1 -18 6148 6088 1017 300 55 57 chr2 130176916 130177406 -123079177 - L2 LINE L2 -2 3311 2823 684 254 132 18 chr2 130178225 130178445 -123078138 - MIR SINE MIR -3 259 15 317 324 20 29 chr2 130179315 130179417 -123077166 + L2 LINE L2 3150 3250 -22 677 264 24 45 chr2 130181132 130181378 -123075205 - MIR SINE MIR -8 254 14 280 67 0 0 chr2 130182644 130182689 -123073894 + L1MA3 LINE L1 6261 6305 0 23 0 0 0 chr2 130182861 130182884 -123073699 + AT_rich Low_complexity Low_complexity 1 23 0 537 241 9 0 chr2 130183085 130183193 -123073390 + FLAM_A SINE Alu 1 109 -33 3801 188 38 14 chr2 130183395 130184287 -123072296 - L1MA9 LINE L1 -133 6179 5266 192 306 81 81 chr2 130184322 130184433 -123072150 + MIR SINE MIR 25 135 -73 2021 133 20 3 chr2 130184725 130185027 -123071556 - AluSq SINE Alu -6 307 1 25 51 0 0 chr2 130186294 130186333 -123070250 + AT_rich Low_complexity Low_complexity 1 39 0 2171 117 7 0 chr2 130187471 130187769 -123068814 + AluSx SINE Alu 1 300 -12 2342 98 0 3 chr2 130188731 130189038 -123067545 - AluSx SINE Alu -6 306 1 290 345 0 0 chr2 130189518 130189602 -123066981 - MIR SINE MIR -18 244 161 341 260 29 29 chr2 130189619 130189723 -123066860 - MIR SINE MIR 0 262 159 201 154 0 0 chr2 130190751 130190790 -123065793 + (TG)n Simple_repeat Simple_repeat 2 40 0 180 254 68 17 chr2 130191355 130191414 -123065169 + L2 LINE L2 1942 2003 -1311 21 0 0 0 chr2 130194386 130194407 -123062176 + AT_rich Low_complexity Low_complexity 1 21 0 222 128 0 0 chr2 130195979 130196018 -123060565 + (TG)n Simple_repeat Simple_repeat 2 40 0 427 298 65 40 chr2 130196172 130196420 -123060163 + L1ME4a LINE L1 5477 5730 -391 228 238 83 0 chr2 130196445 130196529 -123060054 + L1ME4a LINE L1 5795 5885 -236 1278 161 0 33 chr2 130196547 130196758 -123059825 - AluJo SINE Alu -24 288 85 244 175 53 0 chr2 130196906 130196963 -123059620 + L1ME4a LINE L1 6060 6119 -2 414 0 0 0 chr2 130197017 130197063 -123059520 + (TA)n Simple_repeat Simple_repeat 1 46 0 268 284 168 30 chr2 130197646 130197843 -123058740 + MER115 DNA AcHobo 28 251 -442 739 287 56 18 chr2 130197958 130198244 -123058339 + MER115 DNA AcHobo 388 684 -9 2443 68 0 0 chr2 130198298 130198591 -123057992 + AluY SINE Alu 1 293 -18 790 174 47 35 chr2 130198802 130198974 -123057609 - MER5B DNA MER1_type -3 175 2 2399 63 3 28 chr2 130199534 130199852 -123056731 + AluY SINE Alu 1 310 -1 21 0 0 0 chr2 130199962 130199983 -123056600 + AT_rich Low_complexity Low_complexity 1 21 0 1275 131 11 5 chr2 130200294 130200485 -123056098 - AluJb SINE Alu -120 192 1 645 179 0 0 chr2 130200567 130200690 -123055893 + (CATA)n Simple_repeat Simple_repeat 2 124 0 42 0 0 0 chr2 130201301 130201343 -123055240 + AT_rich Low_complexity Low_complexity 1 42 0 2399 61 7 3 chr2 130201368 130201661 -123054922 + AluY SINE Alu 1 294 -17 1496 107 9 5 chr2 130201661 130201877 -123054706 + AluSg/x SINE Alu 79 295 -17 1795 136 30 0 chr2 130202589 130202891 -123053692 + L1MA5A LINE L1 5979 6289 -8 417 242 37 57 chr2 130203413 130203657 -123052926 - MER34B LTR ERV1 -5 560 322 10167 104 12 9 chr2 130204046 130205562 -123051021 + HERVL-A2 LTR ERVL 3706 5225 -429 2079 176 51 72 chr2 130205806 130206555 -123050028 + HERVL-A2 LTR ERVL 4974 5654 0 1994 162 19 73 chr2 130206555 130207120 -123049463 + MLT2A2 LTR ERVL 1 538 -16 928 133 0 0 chr2 130207548 130207706 -123048877 - L1MA4A LINE L1 -56 6247 6090 4255 130 21 4 chr2 130210837 130211513 -123045070 - LTR12 LTR ERV1 -1 687 1 228 293 49 65 chr2 130211884 130212007 -123044576 + L2 LINE L2 2698 2818 -496 407 341 130 18 chr2 130212043 130212319 -123044264 + L2 LINE L2 3005 3311 -2 1964 135 76 0 chr2 130212566 130212855 -123043728 + AluSx SINE Alu 1 311 -1 233 302 128 0 chr2 130213133 130213219 -123043364 - MIR SINE MIR -57 151 55 240 175 0 32 chr2 130213537 130213600 -123042983 + (TA)n Simple_repeat Simple_repeat 1 61 0 40 59 0 0 chr2 130213659 130213727 -123042856 + AT_rich Low_complexity Low_complexity 1 68 0 358 328 58 17 chr2 130213833 130214007 -123042576 + MIR SINE MIR 43 223 -39 255 61 0 0 chr2 130214254 130214287 -123042296 + (TG)n Simple_repeat Simple_repeat 2 34 0 285 275 50 0 chr2 130215928 130216008 -123040575 - MIR SINE MIR -67 141 58 1801 172 130 8 chr2 130217366 130217750 -123038833 + Tigger2a DNA MER2_type 1 431 -3 245 299 0 65 chr2 130217885 130217992 -123038591 + MIR SINE MIR 111 210 -52 187 255 0 20 chr2 130218397 130218448 -123038135 + MER5B DNA MER1_type 1 50 -128 4741 152 47 15 chr2 130219305 130220241 -123036342 + Tigger1 DNA MER2_type 2 967 -1451 13339 206 36 14 chr2 130220259 130220440 -123036143 - L1PB1 LINE L1 -8 6859 6683 2449 87 0 7 chr2 130220440 130220749 -123035834 - AluY SINE Alu 0 311 5 13339 206 36 14 chr2 130220749 130227135 -123029448 - L1PB1 LINE L1 -184 6683 6 8179 147 10 14 chr2 130227155 130228618 -123027965 + Tigger1 DNA MER2_type 962 2418 0 201 74 0 0 chr2 130229059 130229086 -123027497 + (CA)n Simple_repeat Simple_repeat 2 28 0 182 91 30 0 chr2 130229184 130229217 -123027366 + (CA)n Simple_repeat Simple_repeat 1 34 0 269 316 44 26 chr2 130229223 130229337 -123027246 - MIR SINE MIR -138 124 9 1274 301 98 0 chr2 130229337 130229868 -123026715 + MER119 DNA MER1_type 1 583 0 2671 262 45 44 chr2 130231013 130231947 -123024636 + L1MD1 LINE L1 1 935 -5605 309 51 0 0 chr2 130232327 130232366 -123024217 + (TA)n Simple_repeat Simple_repeat 2 40 0 374 169 0 0 chr2 130232378 130232443 -123024140 - MER82 DNA MER2_type -145 508 444 332 353 41 12 chr2 130232475 130232645 -123023938 + MIR SINE MIR 2 176 -86 402 214 12 0 chr2 130232705 130232789 -123023794 - MER82 DNA MER2_type -567 86 2 1490 213 109 7 chr2 130232809 130233223 -123023360 - MLT2C2 LTR ERVL -6 458 3 4750 238 73 26 chr2 130233252 130234297 -123022286 - L1M4c LINE L1 -4489 2157 1162 216 0 0 0 chr2 130234297 130234321 -123022262 + (TTG)n Simple_repeat Simple_repeat 1 24 0 4750 238 73 26 chr2 130234321 130235298 -123021285 - L1M4c LINE L1 -5484 1162 53 282 371 95 23 chr2 130235676 130235897 -123020686 + L2 LINE L2 2836 3072 -200 192 77 0 0 chr2 130236029 130236055 -123020528 + (TA)n Simple_repeat Simple_repeat 1 26 0 258 176 82 47 chr2 130236101 130236186 -123020397 + L1MC4 LINE L1 6616 6703 -1339 309 177 0 0 chr2 130236186 130236238 -123020345 + (TA)n Simple_repeat Simple_repeat 2 56 -7 225 0 0 0 chr2 130236238 130236263 -123020320 + (CA)n Simple_repeat Simple_repeat 2 26 0 309 177 0 0 chr2 130236263 130236272 -123020311 + (TA)n Simple_repeat Simple_repeat 55 63 0 211 322 76 100 chr2 130237292 130237581 -123019002 + L2 LINE L2 2950 3231 -41 282 169 0 15 chr2 130238743 130238808 -123017775 - MER4-int LTR ERV1 -5422 1176 1113 198 143 0 0 chr2 130238808 130238843 -123017740 + (TA)n Simple_repeat Simple_repeat 1 35 0 283 311 19 9 chr2 130238863 130238969 -123017614 + (TATATG)n Simple_repeat Simple_repeat 5 111 0 807 210 14 0 chr2 130239470 130239613 -123016970 + FRAM SINE Alu 1 142 -34 570 263 51 17 chr2 130240167 130240342 -123016241 + L1MD1 LINE L1 949 1129 -5411 1486 206 55 57 chr2 130240346 130240840 -123015743 - MLT1D LTR MaLR 0 505 13 380 194 0 0 chr2 130241322 130241389 -123015194 + L1MD1 LINE L1 2246 2312 -4228 207 130 37 37 chr2 130241411 130241465 -123015118 + (TA)n Simple_repeat Simple_repeat 1 54 0 3030 158 81 7 chr2 130241471 130242080 -123014503 + Tigger2 DNA MER2_type 10 663 -2055 * 9625 154 49 30 chr2 130242064 130243467 -123013116 + Tigger2 DNA MER2_type 778 2228 -490 2119 113 0 10 chr2 130243467 130243769 -123012814 + AluSc SINE Alu 1 299 -10 9625 154 49 30 chr2 130243769 130244270 -123012313 + Tigger2 DNA MER2_type 2228 2718 0 808 144 55 65 chr2 130244277 130244568 -123012015 + L1MD1 LINE L1 2323 2610 -3930 4587 250 66 40 chr2 130244647 130247558 -123009025 + L1MD1 LINE L1 2877 5710 -1043 210 71 0 0 chr2 130247558 130247586 -123008997 + (TA)n Simple_repeat Simple_repeat 1 28 0 4587 250 66 40 chr2 130247586 130247687 -123008896 + L1MD1 LINE L1 5710 5807 -946 180 0 0 0 chr2 130247687 130247707 -123008876 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 4587 250 66 40 chr2 130247707 130248382 -123008201 + L1MD1 LINE L1 5807 6753 0 233 170 21 0 chr2 130250142 130250189 -123006394 + (TAA)n Simple_repeat Simple_repeat 2 49 0 257 296 25 89 chr2 130252270 130252473 -123004110 - L2 LINE L2 -5 3308 3119 1458 275 104 57 chr2 130254143 130256280 -123000303 - L1MC5 LINE L1 -53 7908 5627 2432 47 3 3 chr2 130256280 130256576 -123000007 - AluY SINE Alu -15 296 1 1458 275 104 57 chr2 130256576 130256966 -122999617 - L1MC5 LINE L1 -2334 5627 5257 962 223 0 44 chr2 130257637 130257866 -122998717 - AluJo SINE Alu -93 219 1 185 310 0 17 chr2 130259504 130259562 -122997021 + MIR SINE MIR 95 151 -57 * 544 291 73 75 chr2 130259555 130259926 -122996657 + L2 LINE L2 2944 3313 0 315 0 0 0 chr2 130260098 130260133 -122996450 + (TG)n Simple_repeat Simple_repeat 2 36 0 354 278 9 0 chr2 130260135 130260242 -122996341 + L1MC4 LINE L1 6614 6702 -1340 2177 108 0 24 chr2 130260242 130260539 -122996044 - AluSq SINE Alu -22 291 2 354 375 58 21 chr2 130260634 130260874 -122995709 - L2 LINE L2 -167 3105 2857 186 341 0 0 chr2 130260918 130260962 -122995621 + L2 LINE L2 3211 3254 -18 439 305 85 27 chr2 130261209 130261540 -122995043 - LTR33A LTR ERVL -151 372 23 22 35 0 0 chr2 130261983 130262012 -122994571 + AT_rich Low_complexity Low_complexity 1 29 0 363 292 17 25 chr2 130263104 130263224 -122993359 + MIR SINE MIR 17 135 -127 1196 217 43 77 chr2 130264917 130265383 -122991200 + LTR7 LTR ERV1 1 450 0 544 283 193 0 chr2 130266614 130266826 -122989757 + MIR SINE MIR 10 262 0 221 327 78 46 chr2 130268584 130268737 -122987846 + L2 LINE L2 3115 3272 0 448 201 30 196 chr2 130268813 130269017 -122987566 - MER5A DNA MER1_type 0 178 16 203 254 0 95 chr2 130269043 130269106 -122987477 + MER5B DNA MER1_type 89 145 -33 304 423 83 15 chr2 130269187 130269582 -122987001 - L2 LINE L2 -21 3251 2830 1945 159 102 3 chr2 130269717 130270101 -122986482 + L1PA16 LINE L1 5736 6157 -9 2205 111 0 7 chr2 130270535 130270832 -122985751 - AluSg SINE Alu -15 295 1 311 281 0 21 chr2 130270923 130271019 -122985564 + L1MC4 LINE L1 6605 6698 -1344 231 246 15 15 chr2 130271019 130271084 -122985499 + (TATATG)n Simple_repeat Simple_repeat 5 69 0 198 237 0 0 chr2 130272212 130272250 -122984333 + L2 LINE L2 3258 3295 -18 2278 160 8 12 chr2 130272345 130272746 -122983837 + MER57A LTR ERV1 1 399 -4 2406 73 7 0 chr2 130273951 130274251 -122982332 + AluY SINE Alu 1 302 -9 301 272 44 7 chr2 130274463 130274599 -122981984 - Charlie7 DNA MER1_type -1892 720 580 2441 198 168 98 chr2 130274837 130275791 -122980792 + LTR28 LTR ERV1 1 1020 0 738 220 56 77 chr2 130276043 130276508 -122980075 + MLT1C LTR MaLR 1 466 -1 329 304 58 29 chr2 130276762 130276933 -122979650 - MIR SINE MIR -65 197 22 181 261 0 144 chr2 130278924 130279035 -122977548 + L2 LINE L2 3168 3262 -10 312 309 24 32 chr2 130279142 130279268 -122977315 + MIR SINE MIR 24 148 -114 491 304 165 9 chr2 130279326 130279550 -122977033 + MIR SINE MIR 2 260 -2 2245 102 0 0 chr2 130281020 130281315 -122975268 + AluSg SINE Alu 1 295 -15 3941 107 63 98 chr2 130281315 130282128 -122974455 + LTR1 LTR ERV1 2 785 0 440 329 43 28 chr2 130282318 130282573 -122974010 + MIR SINE MIR 3 261 -1 385 264 57 0 chr2 130282708 130282814 -122973769 - MER81 DNA DNA 0 114 3 1732 96 156 206 chr2 130282905 130283734 -122972849 + LTR12 LTR ERV1 1 2427 -11 294 258 34 0 chr2 130285411 130285500 -122971083 - MLT1K LTR MaLR 0 588 497 224 262 49 0 chr2 130285941 130286002 -122970581 + MIR SINE MIR 86 149 -113 1748 209 8 16 chr2 130286139 130286507 -122970076 - MLT1A1 LTR MaLR 0 365 1 233 29 0 29 chr2 130286861 130286896 -122969687 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 208 159 0 23 chr2 130287279 130287323 -122969260 + A-rich Low_complexity Low_complexity 2 44 0 2318 144 27 29 chr2 130287336 130287779 -122968804 + LTR56 LTR ERV1 4 445 0 216 385 36 10 chr2 130288213 130288408 -122968175 - L2 LINE L2 -927 2387 2188 480 282 0 0 chr2 130288803 130288959 -122967624 + (TA)n Simple_repeat Simple_repeat 1 156 0 302 294 0 22 chr2 130288964 130289056 -122967527 + L1MC4 LINE L1 6614 6703 -1339 * 309 326 0 0 chr2 130289001 130289090 -122967493 - L1MC4 LINE L1 -1340 6702 6614 210 213 21 0 chr2 130289091 130289138 -122967445 + (TA)n Simple_repeat Simple_repeat 1 48 0 759 230 212 15 chr2 130289192 130289241 -122967342 - LTR54B LTR ERV1 0 510 472 2110 149 25 6 chr2 130289241 130289596 -122966987 - THE1B LTR MaLR -2 362 1 759 230 212 15 chr2 130289596 130289967 -122966616 - LTR54B LTR ERV1 -38 472 3 7372 229 47 47 chr2 130290093 130293358 -122963225 + L1MA9 LINE L1 16 3280 -3048 789 181 36 60 chr2 130293358 130293524 -122963059 + AluJo SINE Alu 8 169 -143 7372 229 47 47 chr2 130293524 130293629 -122962954 + L1MA9 LINE L1 3280 3384 -2944 2231 63 0 30 chr2 130293629 130293928 -122962655 + AluY SINE Alu 1 290 -21 7372 229 47 47 chr2 130293928 130295828 -122960755 + L1MA9 LINE L1 3384 5337 -991 1377 254 24 29 chr2 130295823 130296276 -122960307 + L1MA9 LINE L1 6000 6450 -44 * 987 290 138 25 chr2 130296287 130297098 -122959485 + L1M4 LINE L1 3195 4097 -2049 188 346 58 37 chr2 130297444 130297632 -122958951 - L2 LINE L2 -2553 761 570 1176 152 37 5 chr2 130297684 130297901 -122958682 - L1PB1 LINE L1 -3 6148 5925 597 270 40 74 chr2 130297905 130298021 -122958562 - L1MC4a LINE L1 -1639 6169 6051 1701 195 3 10 chr2 130298021 130298334 -122958249 - AluJb SINE Alu -1 311 1 597 270 40 74 chr2 130298334 130298717 -122957866 - L1MC4a LINE L1 -1757 6051 5687 252 0 0 0 chr2 130300210 130300238 -122956345 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 506 323 62 67 chr2 130301094 130301435 -122955148 - L2 LINE L2 -14 3258 2920 572 336 190 22 chr2 130302177 130302586 -122953997 - L2 LINE L2 -626 2688 2349 1546 227 63 0 chr2 130302586 130302951 -122953632 - MLT1B LTR MaLR 0 390 3 572 336 190 22 chr2 130302951 130303189 -122953394 - L2 LINE L2 -965 2349 1932 193 230 149 68 chr2 130303184 130303258 -122953325 + L2 LINE L2 3171 3250 -22 * 2238 109 3 0 chr2 130304163 130304456 -122952127 - AluSx SINE Alu -18 294 1 369 345 55 0 chr2 130304468 130304633 -122951950 - MIR SINE MIR -18 244 71 496 214 60 83 chr2 130304646 130304814 -122951769 - MER63A DNA MER1_type -2 208 45 22 0 0 0 chr2 130304814 130304836 -122951747 + AT_rich Low_complexity Low_complexity 1 22 0 228 214 0 0 chr2 130304838 130304880 -122951703 - MER63A DNA MER1_type -158 52 11 479 335 31 0 chr2 130305318 130305479 -122951104 - MIR SINE MIR -2 260 95 226 211 11 21 chr2 130305794 130305889 -122950694 + (TCTA)n Simple_repeat Simple_repeat 4 97 0 3305 23 0 0 chr2 130306358 130306746 -122949837 - L1P LINE L1 -1076 5070 4683 * 4301 0 0 0 chr2 130306743 130307219 -122949364 + L1HS LINE L1 5680 6155 0 26 0 0 0 chr2 130307275 130307301 -122949282 + AT_rich Low_complexity Low_complexity 1 26 0 1937 116 3 69 chr2 130307747 130308065 -122948518 - AluSx SINE Alu -15 297 1 212 359 0 22 chr2 130308089 130308270 -122948313 + CT-rich Low_complexity Low_complexity 2 178 0 225 39 0 0 chr2 130309250 130309276 -122947307 - MLT2D LTR ERVL 0 414 389 2452 206 15 6 chr2 130309340 130309816 -122946767 - MLT2B1 LTR ERVL -40 480 1 476 291 41 15 chr2 130311493 130311689 -122944894 + L1ME LINE L1 5546 5746 -375 1751 144 57 30 chr2 130311701 130312000 -122944583 - AluJb SINE Alu -5 307 1 551 316 22 42 chr2 130312291 130312604 -122943979 + MLT1I LTR MaLR 70 376 -33 29 60 0 0 chr2 130312645 130312695 -122943888 + AT_rich Low_complexity Low_complexity 1 50 0 3418 268 85 53 chr2 130312931 130314868 -122941715 - L1MC4a LINE L1 -310 7498 5499 2063 55 0 19 chr2 130315019 130315276 -122941307 - AluY SINE Alu -59 252 1 216 0 0 0 chr2 130315584 130315608 -122940975 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1173 166 5 20 chr2 130315610 130315809 -122940774 - AluJo SINE Alu -30 282 87 816 196 16 26 chr2 130315889 130316083 -122940500 + L1MB8 LINE L1 5978 6169 -9 337 288 110 18 chr2 130316966 130317129 -122939454 + MIR SINE MIR 79 256 -6 41 63 0 42 chr2 130317330 130317472 -122939111 + AT_rich Low_complexity Low_complexity 1 136 0 21 71 0 0 chr2 130317929 130317971 -122938612 + AT_rich Low_complexity Low_complexity 1 42 0 183 80 0 0 chr2 130319683 130319708 -122936875 + (TTA)n Simple_repeat Simple_repeat 2 26 0 298 280 50 20 chr2 130320447 130320547 -122936036 + MIR SINE MIR 14 116 -146 22 35 0 0 chr2 130320565 130320594 -122935989 + AT_rich Low_complexity Low_complexity 1 29 0 896 168 45 11 chr2 130321216 130321395 -122935188 - Tigger2 DNA MER2_type -1 2717 2533 * 1138 128 30 15 chr2 130321370 130321573 -122935010 - Tigger2 DNA MER2_type -2512 206 1 1246 293 110 12 chr2 130321775 130322274 -122934309 - MLT1G LTR MaLR -11 579 32 754 287 104 70 chr2 130322517 130322959 -122933624 + MLT1G LTR MaLR 4 460 -107 369 0 0 0 chr2 130323061 130323102 -122933481 + (CA)n Simple_repeat Simple_repeat 2 42 0 24 32 0 0 chr2 130323400 130323431 -122933152 + AT_rich Low_complexity Low_complexity 1 31 0 360 293 70 49 chr2 130323789 130324076 -122932507 - L1M4 LINE L1 -3373 2773 2481 334 283 136 0 chr2 130324208 130324392 -122932191 - L1M4 LINE L1 -3823 2323 2115 1979 124 46 0 chr2 130324583 130324866 -122931717 - AluY SINE Alu -15 296 1 288 259 12 0 chr2 130325504 130325589 -122930994 + MER103 DNA DNA 78 163 -3 300 255 21 21 chr2 130325871 130325965 -122930618 - LTR67 LTR ERVL 0 557 464 2364 101 0 0 chr2 130326790 130327098 -122929485 + AluSq SINE Alu 1 308 -5 217 224 0 20 chr2 130327266 130327315 -122929268 - L2 LINE L2 -4 3268 3221 194 272 198 0 chr2 130327898 130327979 -122928604 - L2 LINE L2 0 3272 3176 623 252 7 0 chr2 130328063 130328202 -122928381 + FRAM SINE Alu 1 140 -36 228 67 0 0 chr2 130328213 130328243 -122928340 + (CAA)n Simple_repeat Simple_repeat 1 30 0 766 227 100 77 chr2 130328375 130328675 -122927908 + L1MB7 LINE L1 -553 4294967049 -6531 858 162 0 0 chr2 130328676 130328812 -122927771 + FRAM SINE Alu 11 146 -30 3692 215 51 12 chr2 130328958 130330546 -122926037 + L1MB7 LINE L1 4779 6410 -10 217 333 60 60 chr2 130331632 130331749 -122924834 + L2 LINE L2 3155 3271 -1 398 248 27 67 chr2 130332763 130332912 -122923671 + MIR SINE MIR 52 194 -68 23 0 0 0 chr2 130333500 130333523 -122923060 + AT_rich Low_complexity Low_complexity 1 23 0 660 257 43 72 chr2 130333602 130334130 -122922453 + L1MB1 LINE L1 1977 2790 -4706 953 274 27 27 chr2 130334273 130334851 -122921732 + L1MB1 LINE L1 3315 3900 -3665 2120 146 44 16 chr2 130334851 130335234 -122921349 - Tigger4(Zombi) DNA MER2_type -1 2730 2337 761 189 8 0 chr2 130335230 130335357 -122921226 - Tigger4(Zombi) DNA MER2_type -2603 128 1 * 308 161 48 0 chr2 130335312 130335374 -122921209 + MER46A DNA MER2_type 99 163 -73 * 2405 257 60 18 chr2 130335384 130336336 -122920247 + L1MB1 LINE L1 3927 4918 -2647 240 214 0 0 chr2 130336342 130336398 -122920185 + GA-rich Low_complexity Low_complexity 3 58 0 232 263 26 40 chr2 130337999 130338075 -122918508 + L2 LINE L2 3007 3081 -191 234 0 0 0 chr2 130338619 130338645 -122917938 + (GA)n Simple_repeat Simple_repeat 1 26 0 2051 118 6 31 chr2 130338733 130339054 -122917529 + AluSq SINE Alu 1 313 0 259 272 33 115 chr2 130339276 130339607 -122916976 - L1ME1 LINE L1 -5 6161 5858 21 0 0 0 chr2 130340319 130340340 -122916243 + AT_rich Low_complexity Low_complexity 1 21 0 10104 39 0 1 chr2 130343139 130345146 -122911437 + L1PA5 LINE L1 4147 6153 -1 2723 147 22 13 chr2 130345146 130345735 -122910848 - MER4E LTR ERV1 -7 759 1 1051 43 0 14 chr2 130347569 130347707 -122908876 + L1PA4 LINE L1 6020 6155 0 208 244 0 0 chr2 130348073 130348118 -122908465 + L2 LINE L2 3262 3306 -7 218 213 0 0 chr2 130348234 130348281 -122908302 + (TA)n Simple_repeat Simple_repeat 2 48 0 230 304 51 89 chr2 130348482 130348640 -122907943 - MER5A DNA MER1_type 0 189 38 354 317 110 24 chr2 130348662 130348826 -122907757 + MER5B DNA MER1_type 1 178 0 4835 166 6 5 chr2 130348863 130349737 -122906846 + L1MA6 LINE L1 5421 6295 -5 2241 229 54 7 chr2 130351704 130352410 -122904173 + L1MB1 LINE L1 4939 5758 -1807 1227 184 19 21 chr2 130352412 130352780 -122903803 - Tigger2a DNA MER2_type -7 437 1 2705 236 36 28 chr2 130352780 130353186 -122903397 + L1MB1 LINE L1 5755 6156 -1575 2265 99 0 20 chr2 130353186 130353488 -122903095 + AluY SINE Alu 1 296 -15 2705 236 36 28 chr2 130353488 130354051 -122902532 + L1MB1 LINE L1 6156 6734 -997 207 0 0 0 chr2 130354051 130354074 -122902509 + (CAG)n Simple_repeat Simple_repeat 1 23 0 2705 236 36 28 chr2 130354074 130354411 -122902172 + L1MB1 LINE L1 6734 7067 -664 1979 191 32 11 chr2 130354511 130354888 -122901695 + Tigger2 DNA MER2_type 2334 2718 0 1223 228 55 0 chr2 130354888 130355232 -122901351 + L1MB1 LINE L1 7064 7455 -255 1975 136 24 7 chr2 130355253 130355547 -122901036 + AluSx SINE Alu 3 301 -11 1368 255 57 49 chr2 130355561 130357096 -122899487 + L1MB3 LINE L1 1239 2884 -3498 * 3829 216 35 26 chr2 130357094 130357357 -122899226 + L1MB3 LINE L1 4656 4915 -1504 225 0 0 0 chr2 130357357 130357382 -122899201 + (CAA)n Simple_repeat Simple_repeat 3 27 0 3829 216 35 26 chr2 130357382 130357880 -122898703 + L1MB3 LINE L1 4915 5407 -1012 1903 144 70 14 chr2 130357880 130358235 -122898348 - THE1C LTR MaLR 0 375 1 3829 216 35 26 chr2 130358235 130358815 -122897768 + L1MB3 LINE L1 5407 6024 -395 2272 78 0 0 chr2 130358815 130359127 -122897456 - AluY SINE Alu 0 312 1 3829 216 35 26 chr2 130359127 130359486 -122897097 + L1MB3 LINE L1 6024 6378 -41 22 56 0 0 chr2 130359583 130359619 -122896964 + AT_rich Low_complexity Low_complexity 1 36 0 348 24 0 0 chr2 130359697 130359738 -122896845 + (GGGA)n Simple_repeat Simple_repeat 4 44 0 30 27 0 0 chr2 130359892 130359929 -122896654 + AT_rich Low_complexity Low_complexity 1 37 0 548 280 29 97 chr2 130360196 130360552 -122896031 + MLT1I LTR MaLR 80 409 0 570 314 52 9 chr2 130362061 130362290 -122894293 - MIR SINE MIR -20 242 4 560 236 5 65 chr2 130363141 130363340 -122893243 + MLT1E2 LTR MaLR 1 187 -439 930 169 81 129 chr2 130363340 130363612 -122892971 + AluJo SINE Alu 30 288 -24 913 264 52 41 chr2 130363708 130363977 -122892606 + MLT1E2 LTR MaLR 355 626 0 368 304 136 11 chr2 130364743 130364934 -122891649 + MLT1J2 LTR MaLR 103 317 -133 216 97 0 0 chr2 130365714 130365745 -122890838 + (TACG)n Simple_repeat Simple_repeat 2 32 0 1827 65 4 0 chr2 130365750 130365980 -122890603 - AluY SINE Alu -3 308 78 2404 81 0 3 chr2 130366947 130367256 -122889327 - AluY SINE Alu -3 308 1 1562 180 3 65 chr2 130367339 130367661 -122888922 - AluSx SINE Alu -10 302 1 291 28 0 0 chr2 130367769 130367805 -122888778 + (TG)n Simple_repeat Simple_repeat 1 36 0 300 369 16 21 chr2 130368457 130368644 -122887939 + L1 LINE L1 4075 4260 -1886 1318 251 142 56 chr2 130368653 130369699 -122886884 + L1MC5 LINE L1 6772 7907 -54 358 264 11 11 chr2 130370194 130370285 -122886298 - L2 LINE L2 -4 3268 3178 21 0 0 0 chr2 130371734 130371755 -122884828 + AT_rich Low_complexity Low_complexity 1 21 0 534 296 145 25 chr2 130371827 130372144 -122884439 + Tigger8 DNA MER2_type 45 399 -267 261 363 37 0 chr2 130372400 130372535 -122884048 - MIR SINE MIR -72 190 51 31 26 0 0 chr2 130372588 130372626 -122883957 + AT_rich Low_complexity Low_complexity 1 38 0 2111 119 3 3 chr2 130373339 130373641 -122882942 + AluSg SINE Alu 1 302 -8 306 0 0 0 chr2 130373681 130373715 -122882868 + (TG)n Simple_repeat Simple_repeat 2 35 0 197 341 57 72 chr2 130374105 130374432 -122882151 - L2 LINE L2 -669 2645 2324 267 79 0 0 chr2 130374432 130374470 -122882113 + (TG)n Simple_repeat Simple_repeat 2 39 0 197 341 57 72 chr2 130374470 130374544 -122882039 - L2 LINE L2 -990 2324 2250 2374 72 0 25 chr2 130376694 130377012 -122879571 - AluY SINE Alu -1 310 1 895 260 61 20 chr2 130377059 130377355 -122879228 - LTR38 LTR ERV1 -162 394 87 279 254 196 22 chr2 130378921 130379059 -122877524 + MIR3 SINE MIR 31 192 -16 24 53 0 0 chr2 130379824 130379862 -122876721 + AT_rich Low_complexity Low_complexity 1 38 0 43356 45 2 1 chr2 130379872 130386013 -122870570 + L1PA3 LINE L1 6 6152 -3 243 305 69 30 chr2 130386128 130386259 -122870324 + L1ME3 LINE L1 5511 5646 -475 342 0 0 0 chr2 130386278 130386316 -122870267 + (TG)n Simple_repeat Simple_repeat 2 39 0 203 169 0 26 chr2 130386341 130386418 -122870165 + (TCTA)n Simple_repeat Simple_repeat 4 78 0 261 111 0 0 chr2 130387162 130387198 -122869385 + MLT1J LTR MaLR 97 132 -379 354 291 41 45 chr2 130387549 130387817 -122868766 + L1ME3 LINE L1 5896 6162 0 1456 257 24 26 chr2 130387879 130388296 -122868287 + MLT1C LTR MaLR 1 416 -51 302 311 29 10 chr2 130388620 130388723 -122867860 - MIR SINE MIR -94 168 64 3418 154 16 149 chr2 130388778 130389779 -122866804 - MER4D LTR ERV1 0 903 1 1770 207 128 83 chr2 130389801 130390619 -122865964 - L1MDa LINE L1 -3959 2685 1831 759 191 27 33 chr2 130390599 130390782 -122865801 - L1MDa LINE L1 -5328 1319 1138 * 33 66 0 0 chr2 130390816 130390877 -122865706 + AT_rich Low_complexity Low_complexity 1 61 0 415 309 6 6 chr2 130390924 130391102 -122865481 - L1ME4a LINE L1 -230 5891 5714 336 187 0 88 chr2 130391116 130391207 -122865376 - L1MA9 LINE L1 -34 6257 6175 269 189 0 0 chr2 130391204 130391257 -122865326 - L1MDa LINE L1 -5495 1152 1100 * 227 273 0 0 chr2 130391259 130391314 -122865269 - L1MDa LINE L1 -4524 2120 2066 * 1402 291 107 48 chr2 130391302 130391982 -122864601 - L1MDa LINE L1 -5524 1123 404 310 307 51 31 chr2 130391982 130392287 -122864296 + MLT1G LTR MaLR 94 433 -109 225 235 0 20 chr2 130392315 130392366 -122864217 + MLT1G LTR MaLR 536 585 -8 320 321 179 41 chr2 130392625 130393067 -122863516 - HAL1 LINE L1 -2003 504 2 21 0 0 0 chr2 130393723 130393744 -122862839 + AT_rich Low_complexity Low_complexity 1 21 0 219 319 14 14 chr2 130394014 130394086 -122862497 + MIR SINE MIR 41 112 -96 203 331 15 0 chr2 130394955 130395034 -122861549 + MIR SINE MIR 71 151 -57 278 292 56 15 chr2 130395325 130395520 -122861063 - L1ME4a LINE L1 -230 5891 5689 * 2417 263 29 31 chr2 130395515 130396314 -122860269 - L1ME1 LINE L1 -5 6161 5365 723 288 88 10 chr2 130396335 130396749 -122859834 - L1MEc LINE L1 -4549 1666 1120 714 240 138 18 chr2 130396870 130397145 -122859438 - L1MEc LINE L1 -5426 970 663 268 263 53 0 chr2 130397204 130397280 -122859303 + MER96 DNA MER1_type? 3 82 -93 311 272 104 8 chr2 130397318 130397443 -122859140 - MER96 DNA MER1_type? -35 140 4 1358 289 43 14 chr2 130397464 130397979 -122858604 - L1MEc LINE L1 -5822 574 45 21 0 0 0 chr2 130398060 130398081 -122858502 + AT_rich Low_complexity Low_complexity 1 21 0 302 268 142 54 chr2 130399694 130399884 -122856699 - L1ME4a LINE L1 -476 5645 5437 8875 177 46 1 chr2 130400002 130403197 -122853386 - L1PBa LINE L1 -2475 4387 903 673 239 6 0 chr2 130403222 130403385 -122853198 - L1PBa LINE L1 -6694 169 6 3040 131 25 4 chr2 130403398 130403918 -122852665 - L1P4 LINE L1 -366 5800 5270 2963 212 42 1 chr2 130404018 130404711 -122851872 - L1P4 LINE L1 -864 5282 4562 213 39 0 0 chr2 130405484 130405510 -122851073 + (CA)n Simple_repeat Simple_repeat 2 27 0 235 413 14 7 chr2 130407514 130407657 -122848926 + L3 LINE CR1 1322 1465 -112 343 370 42 6 chr2 130407716 130407881 -122848702 - MIR SINE MIR -66 196 26 551 89 13 0 chr2 130409786 130409865 -122846718 + MADE1 DNA Mariner 1 80 0 1907 128 0 31 chr2 130410381 130410670 -122845913 - AluSx SINE Alu -20 292 13 1055 215 10 10 chr2 130410815 130411020 -122845563 - AluJb SINE Alu -23 289 85 400 282 20 87 chr2 130411020 130411471 -122845112 + HAL1 LINE L1 1089 1509 -998 1675 220 9 6 chr2 130413767 130414108 -122842475 - MLT1A1 LTR MaLR -2 363 22 807 245 5 10 chr2 130414448 130414640 -122841943 + MER34 LTR ERV1 1 191 -351 2003 142 6 17 chr2 130414650 130414996 -122841587 - L1PA14 LINE L1 -16 6145 5804 667 112 0 0 chr2 130414996 130415094 -122841489 + L1PA14 LINE L1 5711 5808 -353 847 221 64 29 chr2 130415095 130415428 -122841155 + MER34 LTR ERV1 169 541 -1 494 276 68 68 chr2 130416440 130416791 -122839792 - L1MC5 LINE L1 -57 7904 7554 242 0 0 0 chr2 130417349 130417379 -122839204 + L1PA6 LINE L1 6116 6145 -9 1238 154 103 26 chr2 130417387 130417620 -122838963 + THE1B LTR MaLR 56 306 -58 183 100 0 0 chr2 130417646 130417676 -122838907 + (TAAAAA)n Simple_repeat Simple_repeat 2 31 0 327 297 89 58 chr2 130417905 130418232 -122838351 - L1ME4a LINE L1 -56 6065 5729 196 330 85 9 chr2 130418340 130418446 -122838137 - MIR SINE MIR -59 149 45 218 274 0 0 chr2 130418705 130418756 -122837827 + (TATG)n Simple_repeat Simple_repeat 3 53 0 217 253 40 10 chr2 130418706 130418805 -122837778 + (TA)n Simple_repeat Simple_repeat 1 102 0 * 22 0 0 0 chr2 130418828 130418850 -122837733 + AT_rich Low_complexity Low_complexity 1 22 0 245 275 0 22 chr2 130418855 130418946 -122837637 + L1MC4 LINE L1 6619 6707 -1335 3125 144 0 4 chr2 130418973 130419472 -122837111 - LOR1a LTR ERV1 0 497 1 1507 189 19 7 chr2 130419922 130420192 -122836391 - AluJo SINE Alu -37 275 3 266 242 58 33 chr2 130420203 130420323 -122836260 - L1ME4a LINE L1 -478 5643 5521 22 0 0 0 chr2 130420753 130420775 -122835808 + AT_rich Low_complexity Low_complexity 1 22 0 527 41 0 27 chr2 130421152 130421225 -122835358 - L1PA8 LINE L1 -3 6169 6099 398 96 0 0 chr2 130421229 130421281 -122835302 + L1PA8 LINE L1 6029 6080 -92 2213 113 7 3 chr2 130421803 130422113 -122834470 - AluSq SINE Alu -2 311 1 25 51 0 0 chr2 130422185 130422224 -122834359 + AT_rich Low_complexity Low_complexity 1 39 0 839 143 7 0 chr2 130422853 130423007 -122833576 + L1M LINE L1 5265 5419 -886 671 331 96 41 chr2 130423162 130423727 -122832856 + L2 LINE L2 1930 2525 -789 1784 229 40 26 chr2 130423769 130424224 -122832359 + MLT1C LTR MaLR 7 467 0 576 283 99 64 chr2 130424240 130424664 -122831919 + L2 LINE L2 2804 3242 -71 908 228 104 5 chr2 130424664 130424866 -122831717 + MLT1A1 LTR MaLR 1 222 -143 582 237 7 15 chr2 130424895 130425030 -122831553 - MER74A LTR ERVL -411 147 14 569 203 133 7 chr2 130425176 130425319 -122831264 - MLT1A1 LTR MaLR 0 365 205 1498 219 24 30 chr2 130425364 130425698 -122830885 + MER74A LTR ERVL 225 556 -2 1061 151 22 0 chr2 130425698 130425877 -122830706 + L1M4 LINE L1 5449 5631 -553 217 254 119 15 chr2 130425932 130425999 -122830584 - MIR SINE MIR 0 262 189 * 220 302 0 0 chr2 130425993 130426046 -122830537 - MIR SINE MIR -208 54 2 345 299 22 43 chr2 130426792 130427057 -122829526 + L1M4 LINE L1 2289 2546 -3600 23 33 0 0 chr2 130427235 130427265 -122829318 + AT_rich Low_complexity Low_complexity 1 30 0 670 150 18 0 chr2 130427265 130427378 -122829205 + L1MC1 LINE L1 6219 6333 0 2168 108 14 0 chr2 130427661 130427958 -122828625 - AluY SINE Alu -10 301 1 215 313 43 52 chr2 130427958 130428073 -122828510 - MER5A DNA MER1_type -72 117 4 447 78 0 0 chr2 130428273 130428337 -122828246 + (TGGA)n Simple_repeat Simple_repeat 1 64 0 211 339 42 25 chr2 130428505 130428623 -122827960 - L2 LINE L2 -1310 2004 1885 206 241 0 37 chr2 130428940 130428994 -122827589 - MIR SINE MIR -10 252 201 324 246 82 18 chr2 130430292 130430402 -122826181 - MLT1H LTR MaLR 0 549 433 282 171 200 0 chr2 130430888 130430958 -122825625 - MER58A DNA MER1_type 0 156 73 7015 58 0 2 chr2 130430963 130432313 -122824270 - L1PA5 LINE L1 0 6154 4804 1936 34 0 4 chr2 130432313 130432549 -122824034 + L1PA5 LINE L1 4550 4784 -1362 429 274 11 0 chr2 130432549 130432644 -122823939 - MER58A DNA MER1_type -11 96 1 330 276 125 26 chr2 130432666 130432818 -122823765 - MLT1G1 LTR MaLR -12 555 389 458 284 143 2 chr2 130432852 130433110 -122823473 - MLT1G1 LTR MaLR -291 264 5 2202 125 0 0 chr2 130433536 130433847 -122822736 + AluSq SINE Alu 1 311 -2 332 304 78 19 chr2 130434739 130435098 -122821485 - L1M4 LINE L1 -2174 3972 3593 333 326 14 7 chr2 130436906 130437044 -122819539 - L1MEc LINE L1 -4718 1678 1540 21 57 0 0 chr2 130437257 130437292 -122819291 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr2 130437370 130437395 -122819188 + AT_rich Low_complexity Low_complexity 1 25 0 2144 111 0 20 chr2 130437838 130438135 -122818448 - AluSx SINE Alu -9 303 13 229 350 29 10 chr2 130490158 130490261 -122766322 + L3 LINE CR1 928 1032 -545 2046 69 0 8 chr2 130490618 130490878 -122765705 - AluY SINE Alu -22 289 32 302 317 24 24 chr2 130490878 130491001 -122765582 - L2 LINE L2 -600 2714 2592 401 229 19 8 chr2 130491140 130491267 -122765316 - L1MC/D LINE L1 -325 5796 5688 898 284 154 0 chr2 130491362 130491661 -122764922 - MLT1F LTR MaLR -49 493 149 1002 303 15 10 chr2 130491667 130492066 -122764517 - L1MEc LINE L1 -4588 1808 1408 2485 294 38 10 chr2 130492100 130492995 -122763588 - L1MEc LINE L1 -5426 970 51 203 358 102 23 chr2 130493014 130493190 -122763393 + L2 LINE L2 2594 2783 -531 480 263 24 114 chr2 130493914 130494169 -122762414 + MIR SINE MIR 31 262 0 1850 139 43 38 chr2 130495302 130495675 -122760908 + THE1C LTR MaLR 1 375 0 467 194 92 0 chr2 130496397 130496495 -122760088 + MLT1F1 LTR MaLR 2 108 -459 1250 130 0 5 chr2 130496495 130496695 -122759888 + HERVL-B3 LTR ERVL 5456 5654 0 1946 215 31 79 chr2 130496695 130497277 -122759306 + MLT2B3 LTR ERVL 1 554 0 1242 200 182 21 chr2 130497278 130497663 -122758920 + MLT1F1 LTR MaLR 105 551 -16 181 345 36 12 chr2 130497683 130497767 -122758816 - MER5A DNA MER1_type -69 120 35 187 234 106 0 chr2 130498144 130498191 -122758392 + L2 LINE L2 3256 3307 -6 318 297 73 30 chr2 130500485 130500650 -122755933 + MIR SINE MIR 86 257 -5 204 209 0 0 chr2 130500650 130500693 -122755890 + (TGAA)n Simple_repeat Simple_repeat 3 45 0 302 265 10 51 chr2 130500881 130500979 -122755604 - MIR SINE MIR -29 233 140 717 265 106 20 chr2 130502289 130502700 -122753883 + MER57A LTR ERV1 10 402 -1 371 233 53 27 chr2 130502701 130502851 -122753732 - Zaphod DNA AcHobo -65 3966 3813 650 185 41 82 chr2 130502873 130503116 -122753467 - Zaphod DNA AcHobo -649 3382 3150 311 136 57 23 chr2 130503773 130503861 -122752722 - L1MB2 LINE L1 -12 6159 6069 309 156 141 0 chr2 130503869 130503933 -122752650 + L1MB3 LINE L1 6086 6158 -25 1167 199 7 43 chr2 130503966 130504242 -122752341 - L1MB3 LINE L1 -110 6073 5808 * 3077 265 54 23 chr2 130504228 130505614 -122750969 - L1M4 LINE L1 -2576 3806 2378 1469 225 11 0 chr2 130505618 130505898 -122750685 - AluJo SINE Alu -18 294 12 1202 125 5 22 chr2 130505910 130506134 -122750449 - L1M4 LINE L1 -3991 2393 2174 8328 188 41 34 chr2 130506140 130508029 -122748554 - L1M4 LINE L1 -4463 1921 19 21 0 0 0 chr2 130508574 130508595 -122747988 + AT_rich Low_complexity Low_complexity 1 21 0 203 158 0 0 chr2 130509160 130509198 -122747385 + (TG)n Simple_repeat Simple_repeat 2 39 0 368 304 49 81 chr2 130509271 130509518 -122747065 - MIR SINE MIR -20 242 4 24 100 0 0 chr2 130509657 130509737 -122746846 + AT_rich Low_complexity Low_complexity 1 80 0 266 268 105 38 chr2 130510275 130510514 -122746069 - L1MB3 LINE L1 -2254 5554 5300 2493 44 0 35 chr2 130511089 130511406 -122745177 + AluY SINE Alu 1 306 -5 207 0 0 0 chr2 130513796 130513819 -122742764 + (CATG)n Simple_repeat Simple_repeat 1 23 0 190 326 23 35 chr2 130514105 130514191 -122742392 + MIR SINE MIR 16 100 -108 2536 43 3 0 chr2 130514839 130515144 -122741439 + AluY SINE Alu 1 306 -5 298 254 84 56 chr2 130515205 130515347 -122741236 + MIR SINE MIR 53 198 -64 723 62 10 0 chr2 130515395 130515491 -122741092 - Alu SINE Alu -8 302 206 222 330 122 0 chr2 130517020 130517135 -122739448 + MIR SINE MIR 19 147 -61 45 79 0 0 chr2 130517559 130517660 -122738923 + AT_rich Low_complexity Low_complexity 1 101 0 371 150 0 25 chr2 130518520 130518600 -122737983 + (TTCC)n Simple_repeat Simple_repeat 3 80 0 303 291 113 40 chr2 130518608 130518855 -122737728 + L2 LINE L2 3045 3309 -4 2092 116 3 0 chr2 130521217 130521524 -122735059 - AluSq SINE Alu 0 308 1 209 246 46 15 chr2 130521549 130521614 -122734969 + MIR SINE MIR 59 125 -137 2373 82 0 7 chr2 130522016 130522322 -122734261 - AluY SINE Alu -7 304 1 254 331 36 30 chr2 130523032 130523198 -122733385 - L1MEc LINE L1 -4606 1790 1624 2014 242 67 48 chr2 130523221 130524007 -122732576 - L1ME2 LINE L1 -21 6938 6138 4542 49 5 0 chr2 130524027 130524623 -122731960 + L1P LINE L1 2913 3511 -2635 911 199 18 0 chr2 130524752 130524821 -122731762 + AluJb SINE Alu 58 124 -188 258 32 0 0 chr2 130524821 130524852 -122731731 + (CA)n Simple_repeat Simple_repeat 2 32 0 911 199 18 0 chr2 130524852 130524948 -122731635 + AluJb SINE Alu 124 226 -86 1171 232 42 29 chr2 130524978 130525362 -122731221 - L1ME1 LINE L1 -140 6026 5638 276 197 0 0 chr2 130525378 130525439 -122731144 - L1ME2 LINE L1 -844 6097 6037 1427 229 72 74 chr2 130525439 130525739 -122730844 + MLT1D LTR MaLR 1 301 -204 2018 142 10 0 chr2 130525739 130526048 -122730535 + AluSx SINE Alu 1 312 0 1427 229 72 74 chr2 130526048 130526248 -122730335 + MLT1D LTR MaLR 301 500 -5 2106 258 110 42 chr2 130526265 130526774 -122729809 - L1ME2 LINE L1 -912 6029 5556 2195 116 3 0 chr2 130526774 130527076 -122729507 - AluSq SINE Alu -6 307 5 2106 258 110 42 chr2 130527076 130527871 -122728712 - L1ME2 LINE L1 -1385 5556 4636 2154 285 41 19 chr2 130527888 130528928 -122727655 - L1ME2 LINE L1 -2734 4207 3145 741 330 75 55 chr2 130528986 130530450 -122726133 - L1MEc LINE L1 -4893 1503 11 362 251 37 21 chr2 130530551 130530742 -122725841 - L1ME2 LINE L1 -4933 2189 1996 539 297 95 15 chr2 130530847 130531317 -122725266 - L1ME2 LINE L1 -4887 1536 1262 247 54 0 0 chr2 130531745 130531782 -122724801 - L1PA11 LINE L1 0 6174 6138 2254 118 6 14 chr2 130532183 130532531 -122724052 + LTR8 LTR ERV1 1 345 -346 4533 119 92 30 chr2 130532531 130533915 -122722668 - pTR5 LTR ERV1 0 2606 1524 2252 152 0 14 chr2 130533915 130534270 -122722313 + LTR8 LTR ERV1 342 691 0 2810 113 74 9 chr2 130534369 130534831 -122721752 - LTR22B LTR ERVK 0 492 1 1208 107 17 0 chr2 130535190 130535368 -122721215 - LTR22B LTR ERVK -271 221 41 2410 255 100 27 chr2 130535567 130536308 -122720275 + L1MA5 LINE L1 1 795 -6414 * 2870 206 55 91 chr2 130536287 130537417 -122719166 + L1MA5 LINE L1 1642 2714 -4495 180 0 0 0 chr2 130537425 130537445 -122719138 + (CA)n Simple_repeat Simple_repeat 1 20 0 261 0 0 0 chr2 130537457 130537486 -122719097 + (TG)n Simple_repeat Simple_repeat 2 30 0 243 61 0 0 chr2 130537485 130537518 -122719065 + (TA)n Simple_repeat Simple_repeat 2 34 0 * 504 0 0 0 chr2 130538074 130538130 -122718453 + (TA)n Simple_repeat Simple_repeat 1 56 0 2663 224 49 15 chr2 130538139 130540541 -122716042 + L1MA5 LINE L1 2828 5148 -2214 1661 201 7 3 chr2 130540541 130540834 -122715749 + AluJb SINE Alu 1 294 -18 2663 224 49 15 chr2 130540834 130540860 -122715723 + L1MA5 LINE L1 5148 5172 -2190 300 27 0 0 chr2 130540860 130540897 -122715686 + (CA)n Simple_repeat Simple_repeat 1 37 0 2663 224 49 15 chr2 130540897 130542748 -122713835 + L1MA5 LINE L1 5172 7362 0 1225 169 21 0 chr2 130542748 130542985 -122713598 + Tigger7 DNA MER2_type 2242 2483 -4 3404 230 52 24 chr2 130542987 130543813 -122712770 - MER21B LTR ERV1 -2 861 13 1316 217 19 4 chr2 130544104 130544402 -122712181 - MER57A LTR ERV1 0 403 131 665 112 12 154 chr2 130544410 130544579 -122712004 - MER57A LTR ERV1 -236 167 23 593 323 6 0 chr2 130545000 130545161 -122711422 + MER5A DNA MER1_type 23 184 -5 185 343 112 52 chr2 130545206 130545492 -122711091 - L2 LINE L2 -162 3110 2808 181 353 76 25 chr2 130545689 130545808 -122710775 - L2 LINE L2 -867 2447 2323 184 109 22 22 chr2 130545850 130545896 -122710687 + (TAA)n Simple_repeat Simple_repeat 3 48 0 210 358 37 9 chr2 130546105 130546214 -122710369 + L2 LINE L2 2852 2963 -309 2690 234 63 56 chr2 130546661 130547482 -122709101 - L1MC3 LINE L1 0 7995 7101 376 149 14 0 chr2 130547482 130547556 -122709027 + MER57A LTR ERV1 329 403 0 2690 234 63 56 chr2 130547556 130547945 -122708638 - L1MC3 LINE L1 -894 7101 6716 * 3023 193 65 23 chr2 130547936 130548676 -122707907 - L1MC3 LINE L1 -1358 6427 5657 404 309 105 0 chr2 130549309 130549471 -122707112 + MIR SINE MIR 48 226 -36 180 305 17 0 chr2 130549977 130550036 -122706547 + L2 LINE L2 3250 3309 -4 569 254 62 11 chr2 130551599 130551776 -122704807 - MIR SINE MIR -28 234 49 799 285 53 48 chr2 130551877 130552424 -122704159 + L1MC/D LINE L1 5254 5803 -2005 24 0 0 0 chr2 130553569 130553593 -122702990 + AT_rich Low_complexity Low_complexity 1 24 0 2175 115 0 19 chr2 130554014 130554327 -122702256 - AluSx SINE Alu -5 307 1 317 288 40 32 chr2 130555011 130555136 -122701447 - MIR3 SINE MIR -48 160 35 21 0 0 0 chr2 130555248 130555269 -122701314 + AT_rich Low_complexity Low_complexity 1 21 0 474 325 103 36 chr2 130557839 130558316 -122698267 + L2 LINE L2 2805 3313 0 284 204 0 0 chr2 130560073 130560127 -122696456 + MSTA LTR MaLR 1 54 -372 3080 71 2 14 chr2 130560127 130560547 -122696036 + L1PA8A LINE L1 5688 6102 -29 1922 180 63 6 chr2 130560588 130560954 -122695629 + MSTA LTR MaLR 42 428 0 1203 211 131 0 chr2 130562845 130563143 -122693440 - MER58B DNA MER1_type -1 340 4 2609 59 0 0 chr2 130563971 130564275 -122692308 + AluY SINE Alu 1 304 -7 407 333 49 24 chr2 130565881 130566127 -122690456 - MLT1L LTR MaLR -363 252 1 376 333 39 60 chr2 130566590 130566824 -122689759 - MIR SINE MIR -6 256 28 21 0 0 0 chr2 130567199 130567220 -122689363 + AT_rich Low_complexity Low_complexity 1 21 0 2728 71 3 0 chr2 130568003 130568367 -122688216 + L1PA8 LINE L1 5804 6168 -4 23 0 0 0 chr2 130568466 130568489 -122688094 + AT_rich Low_complexity Low_complexity 1 23 0 264 246 15 0 chr2 130568902 130568967 -122687616 + LTR16A1 LTR ERVL 36 101 -356 274 235 143 20 chr2 130569411 130569509 -122687074 + LTR16A1 LTR ERVL 172 281 -176 723 214 62 38 chr2 130571957 130572167 -122684416 - MIR SINE MIR -7 255 41 1886 125 79 0 chr2 130573103 130573383 -122683200 - AluSg SINE Alu -7 303 2 480 117 0 0 chr2 130573518 130573595 -122682988 + (GA)n Simple_repeat Simple_repeat 2 78 0 207 302 71 16 chr2 130575447 130575573 -122681010 - MIR SINE MIR -17 245 113 31 0 0 0 chr2 130576099 130576130 -122680453 + AT_rich Low_complexity Low_complexity 1 31 0 194 242 15 0 chr2 130576645 130576711 -122679872 + (TA)n Simple_repeat Simple_repeat 1 67 0 22 35 0 0 chr2 130576880 130576909 -122679674 + AT_rich Low_complexity Low_complexity 1 29 0 418 247 209 0 chr2 130576925 130577083 -122679500 - MIR SINE MIR -25 237 47 198 321 57 0 chr2 130577179 130577232 -122679351 - MIR SINE MIR -187 75 20 668 230 65 0 chr2 130577254 130577393 -122679190 + FAM SINE Alu 1 148 -37 486 179 0 0 chr2 130577400 130577495 -122679088 + GA-rich Low_complexity Low_complexity 1 95 0 6660 136 13 8 chr2 130577615 130579006 -122677577 - L1MA3 LINE L1 -1 7723 6325 5722 167 13 11 chr2 130579004 130579873 -122676710 - L1PB1 LINE L1 0 6151 5277 * 219 36 0 0 chr2 130579873 130579901 -122676682 + (TTG)n Simple_repeat Simple_repeat 1 28 0 5722 167 13 11 chr2 130579901 130580715 -122675868 - L1PB1 LINE L1 -874 5277 4466 400 241 83 0 chr2 130580716 130580809 -122675774 + L1 LINE L1 4305 4414 -1732 243 0 0 0 chr2 130580809 130580836 -122675747 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 400 241 83 0 chr2 130580836 130580875 -122675708 + L1 LINE L1 4414 4448 -1698 12665 177 39 10 chr2 130580876 130585748 -122670835 - L1MA3 LINE L1 -1224 6341 1323 23 0 0 0 chr2 130586388 130586411 -122670172 + AT_rich Low_complexity Low_complexity 1 23 0 313 138 15 31 chr2 130586751 130586816 -122669767 - MIR SINE MIR -108 154 91 233 369 58 19 chr2 130587760 130587863 -122668720 - L2 LINE L2 -6 3266 3160 1014 260 37 44 chr2 130588170 130588562 -122668021 + MLT1F1 LTR MaLR 176 548 -1 335 325 195 34 chr2 130588568 130588614 -122667969 - L2 LINE L2 -819 2495 2458 2406 80 6 10 chr2 130588614 130588925 -122667658 + AluY SINE Alu 1 310 -1 335 325 195 34 chr2 130588925 130589530 -122667053 - L2 LINE L2 -856 2458 1739 586 314 58 7 chr2 130589535 130589809 -122666774 - L2 LINE L2 -1791 1523 1236 838 71 0 71 chr2 130589846 130589973 -122666610 - AluSp/q SINE Alu -22 291 174 256 271 9 93 chr2 130589998 130590105 -122666478 - L2 LINE L2 -2134 1180 1083 245 305 123 26 chr2 130590233 130590387 -122666196 - L2 LINE L2 -2942 372 204 1972 133 26 0 chr2 130590731 130591033 -122665550 + AluSq SINE Alu 1 310 -3 252 0 0 0 chr2 130591258 130591286 -122665297 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 2061 239 80 44 chr2 130592339 130593043 -122663540 - L1ME1 LINE L1 -5 6161 5433 241 108 0 0 chr2 130593149 130593186 -122663397 - L2 LINE L2 -1 3312 3276 211 287 69 11 chr2 130593298 130593385 -122663198 - L2 LINE L2 -257 3015 2924 5413 113 44 21 chr2 130593389 130594351 -122662232 + MER11C LTR ERVK 1 1071 0 237 108 0 0 chr2 130594507 130594544 -122662039 + (TG)n Simple_repeat Simple_repeat 2 38 0 214 347 0 31 chr2 130595029 130595127 -122661456 + MIR SINE MIR 16 110 -98 180 0 0 0 chr2 130595422 130595442 -122661141 + (CAATT)n Simple_repeat Simple_repeat 4 23 0 282 208 0 0 chr2 130595578 130595631 -122660952 - MLT1I LTR MaLR -17 392 340 1528 207 10 16 chr2 130595671 130595975 -122660608 + AluJo SINE Alu 3 304 -8 2473 80 0 0 chr2 130596879 130597190 -122659393 - AluY SINE Alu 0 311 1 1704 300 78 30 chr2 130598515 130599503 -122657080 + L2 LINE L2 2264 3313 0 23 33 0 0 chr2 130600551 130600581 -122656002 + AT_rich Low_complexity Low_complexity 1 30 0 1618 198 3 10 chr2 130600605 130600903 -122655680 - AluJb SINE Alu -16 296 1 243 260 70 20 chr2 130602117 130602217 -122654366 - L1MC4 LINE L1 -1324 6718 6614 313 350 83 52 chr2 130602353 130602512 -122654071 + HAL1 LINE L1 1095 1248 -1259 971 261 89 26 chr2 130602512 130602860 -122653723 + MLT1A2 LTR MaLR 1 370 -4 313 350 83 52 chr2 130602860 130603146 -122653437 + HAL1 LINE L1 1248 1554 -953 339 274 81 8 chr2 130603590 130603767 -122652816 + L1ME LINE L1 2275 2463 -3921 361 294 94 73 chr2 130603900 130604088 -122652495 + L1ME LINE L1 2632 2832 -3550 2247 115 0 0 chr2 130604088 130604383 -122652200 + AluSq SINE Alu 1 295 -18 361 294 94 73 chr2 130604383 130604534 -122652049 + L1ME LINE L1 2832 2978 -3404 214 156 44 0 chr2 130604647 130604692 -122651891 + (TA)n Simple_repeat Simple_repeat 1 47 0 693 262 122 0 chr2 130604958 130605195 -122651388 + L2 LINE L2 1800 2065 -1249 611 282 92 99 chr2 130605492 130606029 -122650554 + L2 LINE L2 2787 3312 -1 301 316 53 33 chr2 130606050 130606202 -122650381 + L1ME LINE L1 5139 5293 -1089 23 0 0 0 chr2 130606292 130606315 -122650268 + AT_rich Low_complexity Low_complexity 1 23 0 409 249 49 89 chr2 130606366 130606674 -122649909 + L1ME LINE L1 5490 5787 -611 3768 85 12 2 chr2 130606687 130607204 -122649379 - L1PA7 LINE L1 -8 6146 5625 333 98 0 0 chr2 130607204 130607255 -122649328 + L1P LINE L1 2716 2766 -3380 368 179 0 0 chr2 130607463 130607530 -122649053 - L1MB2 LINE L1 -7 6164 6098 25 51 0 0 chr2 130607620 130607659 -122648924 + AT_rich Low_complexity Low_complexity 1 39 0 23 0 0 0 chr2 130607832 130607855 -122648728 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 130607879 130607901 -122648682 + AT_rich Low_complexity Low_complexity 1 22 0 306 324 69 53 chr2 130608093 130608454 -122648129 + L1M4 LINE L1 3115 3481 -2665 329 292 57 71 chr2 130608612 130608722 -122647861 + L1M4 LINE L1 3671 3781 -2365 1757 201 42 0 chr2 130608722 130609056 -122647527 + MER7A DNA MER2_type 1 346 0 329 292 57 71 chr2 130609056 130609226 -122647357 + L1M4 LINE L1 3781 3947 -2199 4473 155 46 65 chr2 130609238 130609854 -122646729 - L1MA9 LINE L1 0 6312 5721 3023 160 32 76 chr2 130609854 130610577 -122646006 + LTR8 LTR ERV1 1 691 0 4473 155 46 65 chr2 130610577 130610959 -122645624 - L1MA9 LINE L1 -591 5721 5333 2002 164 23 6 chr2 130610961 130611314 -122645269 + MLT1A1 LTR MaLR 7 365 0 3518 183 23 25 chr2 130611314 130612084 -122644499 - L1MA9 LINE L1 -810 5336 4568 1621 133 28 8 chr2 130612084 130612332 -122644251 - AluSx SINE Alu -59 253 1 3234 199 13 3 chr2 130612332 130613010 -122643573 + L1 LINE L1 3543 4227 -1919 1106 191 10 5 chr2 130613123 130613332 -122643251 - MER2 DNA MER2_type -135 210 1 438 174 74 33 chr2 130613332 130613453 -122643130 + L1 LINE L1 4226 4351 -1795 21 36 0 0 chr2 130613474 130613502 -122643081 + AT_rich Low_complexity Low_complexity 1 28 0 204 125 0 0 chr2 130613558 130613590 -122642993 + (TA)n Simple_repeat Simple_repeat 2 33 0 23 0 0 0 chr2 130613603 130613626 -122642957 + AT_rich Low_complexity Low_complexity 1 23 0 630 294 32 41 chr2 130614281 130615026 -122641557 + L1ME LINE L1 511 1143 -4835 1391 114 10 0 chr2 130615047 130615248 -122641335 - L1PA7 LINE L1 -2 6152 5950 1036 277 36 8 chr2 130615261 130615647 -122640936 + L1ME3 LINE L1 5595 5991 -173 1877 216 50 83 chr2 130615659 130616873 -122639710 - L1M4 LINE L1 -362 6627 5463 * 2064 243 104 38 chr2 130616845 130617246 -122639337 - L1M4 LINE L1 -2270 4687 4314 1544 163 112 4 chr2 130617246 130617522 -122639061 - AluSg1 SINE Alu -3 306 1 2064 243 104 38 chr2 130617522 130617913 -122638670 - L1M4 LINE L1 -2643 4314 3951 231 103 0 0 chr2 130617913 130617952 -122638631 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 2064 243 104 38 chr2 130617952 130618220 -122638363 - L1M4 LINE L1 -3006 3951 3555 522 107 0 6 chr2 130618222 130618466 -122638117 + AluSq SINE Alu 3 301 -12 1818 252 46 41 chr2 130618467 130618671 -122637912 - L1MEc LINE L1 -3391 3566 3365 1937 110 41 17 chr2 130618671 130618961 -122637622 + AluSx SINE Alu 2 298 -14 1818 252 46 41 chr2 130618961 130619742 -122636841 - L1MEc LINE L1 -3592 3365 2611 849 258 66 12 chr2 130619835 130620828 -122635755 - L1MEc LINE L1 -5771 1088 4 370 298 14 0 chr2 130620829 130620970 -122635613 + L1ME3 LINE L1 6020 6162 0 596 455 98 22 chr2 130621065 130621522 -122635061 - LTR33A LTR ERVL -3 520 29 627 126 0 0 chr2 130621527 130621638 -122634945 + L1M LINE L1 5258 5368 -812 1807 186 0 3 chr2 130621650 130621967 -122634616 - Tigger1 DNA MER2_type -2101 317 2 337 276 25 70 chr2 130623525 130623724 -122632859 - MIR SINE MIR -14 248 59 233 241 13 51 chr2 130623769 130623811 -122632772 - L1M3 LINE L1 -424 5759 5718 1393 164 75 30 chr2 130623811 130624146 -122632437 - L1MA7 LINE L1 -12 6279 5684 276 141 0 113 chr2 130624144 130624215 -122632368 - L1M3 LINE L1 -738 5440 5378 * 8643 144 62 11 chr2 130624217 130625729 -122630854 + Tigger1 DNA MER2_type 830 2418 0 255 322 34 60 chr2 130626511 130626660 -122629923 - MIR SINE MIR -70 192 48 574 292 109 21 chr2 130627252 130627627 -122628956 + LTR16A LTR ERVL 26 457 0 1170 197 65 100 chr2 130629619 130630010 -122626573 - MLT1A1 LTR MaLR 0 365 6 231 307 89 40 chr2 130630107 130630208 -122626375 + L2 LINE L2 3132 3237 -35 2075 298 65 52 chr2 130630285 130631516 -122625067 + L2 LINE L2 2082 3312 -1 1800 174 0 0 chr2 130633511 130633793 -122622790 + MLT1A1 LTR MaLR 83 364 -1 25 31 0 0 chr2 130634369 130634401 -122622182 + AT_rich Low_complexity Low_complexity 1 32 0 207 0 0 0 chr2 130635056 130635079 -122621504 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2287 79 3 0 chr2 130635082 130635373 -122621210 - AluSq SINE Alu -21 292 1 334 304 0 0 chr2 130635504 130635596 -122620987 + L1MC4 LINE L1 6612 6703 -1339 397 266 138 81 chr2 130637001 130637523 -122619060 - L1ME4a LINE L1 -4 6117 5566 366 129 0 0 chr2 130637765 130637827 -122618756 + (TG)n Simple_repeat Simple_repeat 2 63 0 246 125 45 45 chr2 130637827 130637852 -122618731 + (TA)n Simple_repeat Simple_repeat 2 26 -63 1848 141 59 59 chr2 130637852 130638227 -122618356 + THE1C LTR MaLR 1 375 0 246 125 45 45 chr2 130638227 130638289 -122618294 + (TA)n Simple_repeat Simple_repeat 25 89 0 414 0 0 0 chr2 130638431 130638477 -122618106 + (CA)n Simple_repeat Simple_repeat 1 46 0 2172 155 8 8 chr2 130638511 130638872 -122617711 - MLT2D LTR ERVL -49 365 5 274 296 105 17 chr2 130639150 130639322 -122617261 + MIR SINE MIR 62 248 -14 226 213 53 11 chr2 130639664 130639758 -122616825 + (TA)n Simple_repeat Simple_repeat 2 99 0 5299 109 97 32 chr2 130642680 130643771 -122612812 - MER11A LTR ERVK 0 1266 1 304 361 49 0 chr2 130643930 130644074 -122612509 + HERVL LTR ERVL 1842 1992 -3662 16275 170 50 9 chr2 130644198 130647473 -122609110 - L1PB1 LINE L1 -189 6678 3541 3010 157 80 21 chr2 130647473 130648051 -122608532 + LTR9 LTR ERV1 1 612 0 16275 170 50 9 chr2 130648051 130649290 -122607293 - L1PB1 LINE L1 -3326 3541 2355 297 51 0 0 chr2 130649290 130649329 -122607254 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 16275 170 50 9 chr2 130649329 130651207 -122605376 - L1PB1 LINE L1 -4512 2355 3 2259 245 46 55 chr2 130651732 130652385 -122604198 - L1P3 LINE L1 -5805 992 346 855 223 0 0 chr2 130652412 130652609 -122603974 - L1P LINE L1 -1663 4483 4287 1144 186 9 5 chr2 130652616 130652837 -122603746 + L1P LINE L1 3773 3994 -2152 9654 223 42 6 chr2 130652904 130654653 -122601930 - L1P LINE L1 -1861 4285 2431 237 33 0 0 chr2 130654653 130654683 -122601900 + (TG)n Simple_repeat Simple_repeat 2 31 0 9654 223 42 6 chr2 130654683 130655244 -122601339 - L1P LINE L1 -3715 2431 1892 1962 239 39 0 chr2 130655232 130655621 -122600962 - L1P3 LINE L1 -6379 408 5 * 2339 119 33 25 chr2 130655621 130655982 -122600601 + THE1B LTR MaLR 1 364 0 2157 121 0 0 chr2 130656000 130656303 -122600280 - AluSx SINE Alu 0 303 1 323 323 82 57 chr2 130856545 130856609 -122399974 + L1ME4a LINE L1 5411 5472 -649 2381 105 3 3 chr2 130856609 130856915 -122399668 + AluSg SINE Alu 1 306 -4 323 323 82 57 chr2 130856915 130857306 -122399277 + L1ME4a LINE L1 5472 5908 -213 1548 158 35 3 chr2 130857653 130857937 -122398646 + L1MB3 LINE L1 5891 6183 0 287 132 38 0 chr2 130859248 130859301 -122397282 - MLT2A2 LTR ERVL 0 453 399 208 98 49 0 chr2 130859306 130859347 -122397236 + (TA)n Simple_repeat Simple_repeat 2 44 0 1723 222 63 53 chr2 130859347 130859878 -122396705 - MLT2B3 LTR ERVL -40 500 6 332 302 65 97 chr2 130860875 130861306 -122395277 + L1ME3 LINE L1 5726 6142 -20 1100 148 6 11 chr2 130861320 130861496 -122395087 + AluSc SINE Alu 118 292 -17 1079 135 0 112 chr2 130861568 130861783 -122394800 + AluJo SINE Alu 1 191 -121 312 316 98 42 chr2 130862066 130862281 -122394302 + L1ME4a LINE L1 5682 5908 -213 2528 130 13 5 chr2 130863089 130863482 -122393101 + L1PA12 LINE L1 5773 6168 0 349 286 71 18 chr2 130863800 130863968 -122392615 - MER104 DNA MER2_type -1 179 3 614 296 83 39 chr2 130864065 130864295 -122392288 - MIR SINE MIR -3 259 20 785 155 0 0 chr2 130866163 130866320 -122390263 + FLAM_A SINE Alu 1 157 0 813 142 0 8 chr2 130866477 130866597 -122389986 - AluJb SINE Alu -12 300 182 272 48 24 0 chr2 130866597 130866639 -122389944 + (TTTTA)n Simple_repeat Simple_repeat 2 44 0 757 176 0 8 chr2 130866642 130866761 -122389822 - FLAM_C SINE Alu -24 119 2 21 57 0 0 chr2 130867199 130867234 -122389349 + AT_rich Low_complexity Low_complexity 1 35 0 247 282 90 13 chr2 130867366 130867444 -122389139 - L2 LINE L2 -50 3222 3139 354 296 100 17 chr2 130868493 130868705 -122387878 + MIR SINE MIR 7 234 -28 605 189 9 9 chr2 130870532 130870638 -122385945 + U6 snRNA snRNA 1 106 -1 312 364 53 0 chr2 130871327 130871478 -122385105 - MIR SINE MIR -47 215 57 3290 164 9 8 chr2 130871860 130872386 -122384197 - MER1A DNA MER1_type 0 527 1 321 173 0 0 chr2 130872615 130872667 -122383916 - MER91B DNA MER1_type -60 130 79 601 294 180 10 chr2 130873659 130874043 -122382540 - MLT1L LTR MaLR -166 449 1 216 275 58 0 chr2 130874049 130874118 -122382465 - L2 LINE L2 -565 2749 2677 803 229 47 47 chr2 130874123 130874337 -122382246 - MER58A DNA MER1_type -3 221 8 341 296 82 0 chr2 130874617 130874649 -122381934 + L1MC4 LINE L1 6597 6625 -1417 2101 108 7 7 chr2 130874649 130874936 -122381647 + AluSg1 SINE Alu 3 289 -20 341 296 82 0 chr2 130874936 130875001 -122381582 + L1MC4 LINE L1 6625 6702 -1340 260 233 0 0 chr2 130875002 130875092 -122381491 + L1MC4 LINE L1 6614 6703 -1339 2420 54 24 10 chr2 130875535 130875833 -122380750 - AluY SINE Alu -9 302 1 236 164 55 14 chr2 130877250 130877323 -122379260 + (CAAGC)n Simple_repeat Simple_repeat 5 80 0 465 304 286 8 chr2 130878139 130878278 -122378305 + L2 LINE L2 1292 1391 -1923 2335 78 3 0 chr2 130878278 130878609 -122377974 + AluSp SINE Alu 1 332 0 465 304 286 8 chr2 130878609 130879432 -122377151 + L2 LINE L2 1391 2523 -791 468 236 158 43 chr2 130879647 130879901 -122376682 + L2 LINE L2 3031 3313 0 2204 176 80 0 chr2 130879963 130880412 -122376171 + MER31A LTR ERV1 1 485 0 1838 183 88 15 chr2 130880897 130881295 -122375288 - MSTC LTR MaLR 0 428 2 2068 189 27 18 chr2 130881816 130882256 -122374327 - L1PB4 LINE L1 0 6156 5713 226 44 22 44 chr2 130882498 130882543 -122374040 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 2137 107 4 0 chr2 130882544 130882824 -122373759 - AluSq SINE Alu -32 281 1 2516 84 0 0 chr2 130882900 130883211 -122373372 - AluY SINE Alu 0 311 1 916 102 0 0 chr2 130884686 130884804 -122371779 - AluSg/x SINE Alu -7 302 185 2255 98 3 19 chr2 130884804 130885111 -122371472 - AluSc SINE Alu -7 302 1 684 265 0 6 chr2 130885662 130885843 -122370740 - MLT1B LTR MaLR 0 390 211 792 256 29 4 chr2 130885843 130886081 -122370502 + L1MB5 LINE L1 5724 5967 -207 360 249 113 72 chr2 130886706 130886927 -122369656 + L1MC5 LINE L1 7700 7929 -32 2487 55 0 3 chr2 130887210 130887503 -122369080 + AluY SINE Alu 1 292 -19 1765 154 7 10 chr2 130887515 130887808 -122368775 + AluJo SINE Alu 3 294 -18 289 299 0 0 chr2 130888388 130888465 -122368118 + MIR SINE MIR 96 172 -90 32 26 0 0 chr2 130889344 130889383 -122367200 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr2 130890404 130890425 -122366158 + GC_rich Low_complexity Low_complexity 1 21 0 326 273 0 43 chr2 130890551 130890793 -122365790 + G-rich Low_complexity Low_complexity 1 231 0 362 248 114 19 chr2 130892520 130892625 -122363958 - MIR SINE MIR -44 218 104 2363 70 0 26 chr2 130892680 130892982 -122363601 - AluY SINE Alu -17 294 1 1915 154 30 7 chr2 130893020 130893318 -122363265 + AluJo SINE Alu 1 305 -7 2311 44 10 41 chr2 130896352 130896647 -122359936 + AluY SINE Alu 1 286 -25 957 206 213 48 chr2 130898143 130898220 -122358363 + MER63D DNA MER1_type 5 68 -993 2426 79 0 16 chr2 130898220 130898536 -122358047 - AluY SINE Alu 0 311 1 957 206 213 48 chr2 130898536 130898904 -122357679 + MER63D DNA MER1_type 68 525 -536 921 237 78 10 chr2 130898904 130899199 -122357384 - MER74A LTR ERVL -1 557 243 581 196 131 24 chr2 130899197 130899365 -122357218 + MER74A LTR ERVL 373 558 0 * 2200 89 0 40 chr2 130899725 130900029 -122356554 + AluSg SINE Alu 1 292 -18 2382 67 3 13 chr2 130900031 130900354 -122356229 + AluY SINE Alu 1 320 0 761 142 18 77 chr2 130900717 130900886 -122355697 + FRAM SINE Alu 1 151 -25 42 0 0 0 chr2 130900886 130900928 -122355655 + AT_rich Low_complexity Low_complexity 1 42 0 1950 150 3 13 chr2 130901515 130901821 -122354762 + AluJb SINE Alu 1 303 -9 2170 109 10 22 chr2 130901828 130901963 -122354620 + AluSg SINE Alu 1 136 -174 2644 33 0 10 chr2 130901963 130902267 -122354316 + AluY SINE Alu 1 301 -10 1148 132 16 0 chr2 130902261 130902443 -122354140 + AluSg/x SINE Alu 126 310 -2 2170 109 10 22 chr2 130902267 130902443 -122354140 + AluSg SINE Alu 136 308 -2 760 195 37 173 chr2 130902522 130902675 -122353908 + MLT1A1 LTR MaLR 152 324 -66 189 0 0 0 chr2 130902675 130902696 -122353887 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2454 87 0 0 chr2 130902702 130903012 -122353571 - AluSg SINE Alu 0 310 1 760 195 37 173 chr2 130903012 130903079 -122353504 + MLT1A1 LTR MaLR 329 390 0 25 31 0 0 chr2 130903114 130903146 -122353437 + AT_rich Low_complexity Low_complexity 1 32 0 1415 143 0 21 chr2 130903327 130903564 -122353019 - AluJo SINE Alu -23 289 58 608 141 120 84 chr2 130903566 130903708 -122352875 + MLT2D LTR ERVL 261 407 -7 2302 79 0 0 chr2 130903917 130904209 -122352374 - AluY SINE Alu -19 292 1 358 291 106 26 chr2 130904660 130904887 -122351696 - L1ME LINE L1 -5110 960 716 386 282 24 5 chr2 130905840 130905980 -122350603 + MIR SINE MIR 40 181 -27 2428 50 7 0 chr2 130908250 130908550 -122348033 - AluY SINE Alu -9 302 1 22 35 0 0 chr2 130908560 130908589 -122347994 + AT_rich Low_complexity Low_complexity 1 29 0 428 198 33 11 chr2 130908589 130908680 -122347903 - FLAM_C SINE Alu -25 118 26 205 214 0 54 chr2 130909670 130909715 -122346868 + GA-rich Low_complexity Low_complexity 4 47 -9 1954 128 30 3 chr2 130909715 130910011 -122346572 + AluSx SINE Alu 1 304 -8 205 128 51 0 chr2 130910102 130910141 -122346442 + MIR SINE MIR 89 129 -79 1607 282 137 14 chr2 130910143 130911020 -122345563 + L1ME3A LINE L1 5181 6159 -11 2391 88 0 0 chr2 130911037 130911345 -122345238 - AluSx SINE Alu 0 312 5 1781 106 8 0 chr2 130912508 130912764 -122343819 + AluSp SINE Alu 42 299 -14 2103 83 0 47 chr2 130913164 130913327 -122343256 - AluSc SINE Alu -19 290 121 423 0 0 0 chr2 130913327 130913374 -122343209 + (TG)n Simple_repeat Simple_repeat 2 48 0 180 0 0 0 chr2 130913379 130913399 -122343184 + (TA)n Simple_repeat Simple_repeat 2 21 0 2103 83 0 47 chr2 130913399 130913530 -122343053 - AluSc SINE Alu -192 117 4 1793 153 3 3 chr2 130915585 130915886 -122340697 - AluJb SINE Alu -11 301 1 1642 147 53 10 chr2 130915893 130916192 -122340391 - AluJb SINE Alu 0 312 1 324 236 154 9 chr2 130917946 130918056 -122338527 - MLT1E1 LTR MaLR -528 126 1 4303 106 28 27 chr2 130918143 130918679 -122337904 - MER41B LTR ERV1 0 635 101 2211 84 0 3 chr2 130918679 130918977 -122337606 + AluSx SINE Alu 1 297 -15 2322 73 0 16 chr2 130918977 130919291 -122337292 + AluY SINE Alu 1 309 -2 4303 106 28 27 chr2 130919291 130919387 -122337196 - MER41B LTR ERV1 -533 102 1 773 299 58 75 chr2 130919450 130920039 -122336544 - MLT1E1-int LTR MaLR -97 1274 696 972 188 6 0 chr2 130920204 130920374 -122336209 - MLT1E1-int LTR MaLR -765 606 436 2293 182 85 112 chr2 130920376 130921119 -122335464 + LTR8A LTR ERV1 1 723 -4 553 272 7 0 chr2 130921311 130921447 -122335136 - MLT1E1-int LTR MaLR -1233 138 2 1259 221 116 78 chr2 130921450 130922078 -122334505 - MLT1E1 LTR MaLR -2 652 1 2013 138 0 0 chr2 130922144 130922456 -122334127 - AluSx SINE Alu 0 312 1 693 162 20 167 chr2 130922457 130922655 -122333928 - AluSp SINE Alu -13 300 132 1692 152 34 67 chr2 130922811 130922933 -122333650 + L1MB3 LINE L1 5227 5351 -829 2254 96 0 10 chr2 130922933 130923247 -122333336 - AluSq SINE Alu -2 311 1 1692 152 34 67 chr2 130923247 130923512 -122333071 + L1MB3 LINE L1 5351 5612 -568 2721 180 53 0 chr2 130923555 130924082 -122332501 + L1MB3 LINE L1 5579 6133 -50 3109 134 6 0 chr2 130924602 130925100 -122331483 - L1P LINE L1 -1091 5055 4555 6049 94 16 6 chr2 130925126 130926220 -122330363 + L1PA6 LINE L1 5051 6153 -1 273 149 0 0 chr2 130926252 130926319 -122330264 + (T)n Simple_repeat Simple_repeat 1 67 0 2000 179 79 13 chr2 130926404 130926951 -122329632 - LTR61-int LTR ERV1 -5943 655 29 2710 192 24 5 chr2 130926952 130927503 -122329080 - L1PA13 LINE L1 -3745 3052 2492 1230 266 108 20 chr2 130927522 130927864 -122328719 - L1PA13 LINE L1 -5934 853 482 458 141 0 14 chr2 130927884 130927955 -122328628 + L1PA12 LINE L1 1261 1330 -6251 372 253 0 0 chr2 130927965 130928040 -122328543 + L1PA12 LINE L1 1256 1330 -6244 7543 185 51 7 chr2 130928141 130929470 -122327113 - L1PA12 LINE L1 -5577 2004 617 705 292 180 10 chr2 130932603 130932987 -122323596 - MLT1L LTR MaLR -166 449 1 215 275 58 0 chr2 130932993 130933062 -122323521 - L2 LINE L2 -565 2749 2677 916 220 47 47 chr2 130933067 130933281 -122323302 - MER58A DNA MER1_type -3 221 8 1894 139 7 7 chr2 130935381 130935683 -122320900 + AluSc SINE Alu 7 308 -1 1479 194 137 53 chr2 130935788 130936280 -122320303 - LTR61 LTR ERV1 0 595 1 22 35 0 0 chr2 130936663 130936692 -122319891 + AT_rich Low_complexity Low_complexity 1 29 0 29 60 0 0 chr2 130936768 130936818 -122319765 + AT_rich Low_complexity Low_complexity 1 50 0 35 41 0 0 chr2 130936888 130936937 -122319646 + AT_rich Low_complexity Low_complexity 1 49 0 42 65 0 0 chr2 130937855 130937932 -122318651 + AT_rich Low_complexity Low_complexity 1 77 0 201 328 8 66 chr2 130938346 130938468 -122318115 + MIR3 SINE MIR 90 204 -4 252 228 128 107 chr2 130939396 130939517 -122317066 + L1ME LINE L1 5388 5514 -607 1871 179 9 12 chr2 130939517 130939863 -122316720 - L1PA15 LINE L1 0 6165 5821 252 228 128 107 chr2 130939863 130939890 -122316693 + L1ME LINE L1 5514 5539 -582 436 154 0 0 chr2 130940482 130940547 -122316036 - MER58A DNA MER1_type 0 224 160 907 194 0 0 chr2 130940555 130940715 -122315868 - AluJb SINE Alu -21 291 132 547 144 31 21 chr2 130940728 130940825 -122315758 - MER58A DNA MER1_type -9 98 1 25 31 0 0 chr2 130940957 130940989 -122315594 + AT_rich Low_complexity Low_complexity 1 32 0 25 65 0 0 chr2 130941276 130941322 -122315261 + AT_rich Low_complexity Low_complexity 1 46 0 2475 302 138 13 chr2 130941427 130941801 -122314782 + L2 LINE L2 1777 2103 -1210 1974 137 3 0 chr2 130941801 130942101 -122314482 - AluSx SINE Alu -11 301 1 2475 302 138 13 chr2 130942101 130942853 -122313730 + L2 LINE L2 2103 3044 -269 428 285 138 50 chr2 130943127 130943387 -122313196 + L2 LINE L2 3031 3313 0 2051 78 49 3 chr2 130943444 130943728 -122312855 + AluY SINE Alu 1 297 -14 22 0 0 0 chr2 130943814 130943836 -122312747 + AT_rich Low_complexity Low_complexity 1 22 0 717 117 81 0 chr2 130943936 130944073 -122312510 - AluSg/x SINE Alu 0 309 164 258 388 60 0 chr2 130944837 130944971 -122311612 - MIR SINE MIR -64 198 57 3222 167 8 8 chr2 130945353 130945880 -122310703 - MER1A DNA MER1_type 0 527 1 230 231 0 0 chr2 130946110 130946149 -122310434 - MER91 DNA MER1_type -61 129 91 22 0 0 0 chr2 130946179 130946201 -122310382 + AT_rich Low_complexity Low_complexity 1 22 0 192 125 0 0 chr2 130946553 130946585 -122309998 + (TTA)n Simple_repeat Simple_repeat 2 33 0 675 296 179 10 chr2 130947151 130947536 -122309047 - MLT1L LTR MaLR -165 450 1 195 284 81 0 chr2 130947542 130947616 -122308967 - L2 LINE L2 -565 2749 2670 883 229 47 47 chr2 130947616 130947830 -122308753 - MER58A DNA MER1_type -3 221 8 188 305 12 24 chr2 130948160 130948242 -122308341 - L2 LINE L2 -787 2527 2447 1973 126 51 0 chr2 130949886 130950180 -122306403 + AluSc SINE Alu 1 309 0 2121 101 7 0 chr2 130950828 130951114 -122305469 + AluY SINE Alu 1 288 -23 33 80 0 0 chr2 130952185 130952260 -122304323 + AT_rich Low_complexity Low_complexity 1 75 0 2031 162 14 14 chr2 130953170 130953515 -122303068 - L1PA15 LINE L1 0 6165 5821 244 295 86 36 chr2 130953650 130953789 -122302794 + L1ME LINE L1 5681 5826 -295 433 167 0 0 chr2 130954118 130954184 -122302399 - MER58A DNA MER1_type 0 224 159 931 182 13 0 chr2 130954191 130954345 -122302238 - AluJb SINE Alu -23 289 134 501 214 10 10 chr2 130954360 130954458 -122302125 - MER58A DNA MER1_type -9 98 1 2477 306 87 23 chr2 130955043 130955417 -122301166 + L2 LINE L2 1777 2126 -1187 2245 114 3 0 chr2 130955417 130955725 -122300858 - AluSx SINE Alu -3 309 1 2477 306 87 23 chr2 130955725 130956542 -122300041 + L2 LINE L2 2126 3044 -269 346 308 138 50 chr2 130956897 130957157 -122299426 + L2 LINE L2 3031 3313 0 2047 131 0 10 chr2 130957419 130957717 -122298866 - AluSx SINE Alu -17 295 1 1698 169 30 24 chr2 130958620 130958957 -122297626 + THE1C LTR MaLR 5 343 -32 185 233 0 17 chr2 130958983 130959043 -122297540 + (TA)n Simple_repeat Simple_repeat 2 60 0 4732 195 41 7 chr2 130959062 130960684 -122295899 - L1P5 LINE L1 -363 5791 4109 3113 142 26 10 chr2 130960901 130961400 -122295183 + MER1A DNA MER1_type 18 524 -5 416 240 10 0 chr2 130963297 130963393 -122293190 - THE1-int LTR MaLR -577 1003 907 1012 232 68 11 chr2 130963398 130963678 -122292905 + MSTA LTR MaLR 77 372 -56 598 179 164 8 chr2 130963743 130963877 -122292706 - MST-int LTR MaLR -990 661 507 5836 227 63 19 chr2 130963883 130965432 -122291151 + MSTA-int LTR MaLR 36 1651 0 512 173 9 36 chr2 130965432 130965542 -122291041 + MSTA LTR MaLR 1 107 -321 340 250 0 0 chr2 130965608 130965672 -122290911 + MSTA LTR MaLR 96 159 -269 1407 215 15 44 chr2 130965683 130966023 -122290560 + MSTA-int LTR MaLR 1322 1651 0 542 156 10 0 chr2 130966023 130966119 -122290464 + MSTA LTR MaLR 1 97 -331 252 208 19 0 chr2 130966219 130966272 -122290311 + THE1-int LTR MaLR 914 967 -613 * 765 219 175 23 chr2 130966225 130966511 -122290072 - THE1-int LTR MaLR -368 1283 907 376 206 55 0 chr2 130966527 130966600 -122289983 + MSTA LTR MaLR 95 171 -257 2884 219 64 29 chr2 130966601 130967354 -122289229 + MST-int LTR MaLR 873 1651 0 472 212 10 0 chr2 130967354 130967453 -122289130 + MSTA LTR MaLR 1 100 -328 266 296 49 0 chr2 130967505 130967586 -122288997 + MSTA LTR MaLR 75 159 -269 1398 210 15 41 chr2 130967593 130967936 -122288647 + MSTA-int LTR MaLR 1318 1651 0 499 179 21 0 chr2 130967936 130968031 -122288552 + MSTA LTR MaLR 1 97 -331 282 196 18 0 chr2 130968128 130968184 -122288399 + THE1-int LTR MaLR 911 967 -613 * 740 216 195 4 chr2 130968172 130968408 -122288175 - MST-int LTR MaLR -395 1256 976 427 293 79 6 chr2 130968431 130968595 -122287988 + MSTA LTR MaLR 99 274 -154 302 216 12 12 chr2 130968592 130968699 -122287884 - HSAT5 Satellite Satellite -1 107 1 * 374 214 0 12 chr2 130968945 130969044 -122287539 - HSAT5 Satellite Satellite -3 97 1 244 271 0 12 chr2 130969104 130969189 -122287394 - HSAT5 Satellite Satellite -2 84 1 684 107 4 7 chr2 130969269 130969734 -122286849 - HSAT5 Satellite Satellite 0 463 1 387 113 0 0 chr2 130973414 130973485 -122283098 + (TG)n Simple_repeat Simple_repeat 2 72 0 1131 275 16 0 chr2 130973589 130973902 -122282681 + LTR16C LTR ERVL 146 463 -28 397 235 25 0 chr2 130973892 130973973 -122282610 + LTR16C LTR ERVL 409 491 0 * 411 314 0 0 chr2 130974019 130974137 -122282446 - MIR SINE MIR -122 140 23 22 0 0 0 chr2 130974533 130974555 -122282028 + AT_rich Low_complexity Low_complexity 1 22 0 972 68 0 0 chr2 130974712 130974830 -122281753 - L1PA7 LINE L1 -4 6150 6033 4205 57 2 15 chr2 130974858 130975387 -122281196 + L1PA7 LINE L1 5507 6028 -126 254 272 110 57 chr2 130975513 130975687 -122280896 - MER5A DNA MER1_type -1 188 7 1595 152 83 0 chr2 130976138 130976415 -122280168 - AluSq SINE Alu -13 300 1 245 239 17 120 chr2 130976983 130977100 -122279483 - L2 LINE L2 -53 3219 3115 1903 163 0 10 chr2 130977799 130978088 -122278495 - AluJo SINE Alu -26 286 1 1999 113 11 0 chr2 130978523 130978831 -122277752 + AluSq SINE Alu 17 327 0 2355 99 3 0 chr2 130979738 130980041 -122276542 - AluSc SINE Alu -5 304 1 205 230 40 14 chr2 130980582 130980656 -122275927 + (TAG)n Simple_repeat Simple_repeat 2 77 0 23 0 0 0 chr2 130982655 130982678 -122273905 + AT_rich Low_complexity Low_complexity 1 23 0 1121 53 0 0 chr2 130983796 130983928 -122272655 + AluY SINE Alu 1 132 -179 2110 81 3 11 chr2 130983936 130984248 -122272335 + AluY SINE Alu 1 310 0 608 75 0 0 chr2 130984893 130984973 -122271610 - L1PA6 LINE L1 0 6154 6075 281 190 290 10 chr2 130987392 130987492 -122269091 + MER97a DNA MER1_type? 46 173 -721 259 292 67 11 chr2 130987767 130987856 -122268727 - MER5A DNA MER1_type -95 94 1 741 291 51 45 chr2 130988478 130988858 -122267725 - L1M4 LINE L1 -1622 4524 4139 1909 91 4 0 chr2 130988858 130989099 -122267484 - AluY SINE Alu -69 242 1 741 291 51 45 chr2 130989099 130989185 -122267398 - L1M4 LINE L1 -2007 4139 4055 323 283 0 11 chr2 130989187 130989279 -122267304 - L1M4 LINE L1 -2309 3837 3747 656 263 104 52 chr2 130989285 130989705 -122266878 - L1M4 LINE L1 -2526 3620 3142 2286 114 3 16 chr2 130989705 130990022 -122266561 - AluSp SINE Alu 0 313 1 656 263 104 52 chr2 130990022 130990350 -122266233 - L1M4 LINE L1 -3004 3142 2833 222 318 35 24 chr2 130990384 130990469 -122266114 + MIR SINE MIR 1 86 -176 202 306 111 0 chr2 130990478 130990550 -122266033 - L2 LINE L2 -44 3269 3190 376 351 69 16 chr2 130990570 130990758 -122265825 + MIR SINE MIR 63 260 -2 313 344 51 79 chr2 130990797 130991050 -122265533 + L2 LINE L2 3026 3271 -1 1739 285 86 39 chr2 130991111 130992121 -122264462 - L2 LINE L2 0 3313 2256 2362 142 3 19 chr2 130993324 130993691 -122262892 + MER46B DNA MER2_type 1 236 0 236 307 107 7 chr2 130993899 130994039 -122262544 - MIR SINE MIR -1 261 108 22 35 0 0 chr2 130997022 130997051 -122259532 + AT_rich Low_complexity Low_complexity 1 29 0 761 220 48 14 chr2 130997958 130998167 -122258416 - MER65C LTR ERV1 -4 457 242 542 284 37 47 chr2 130998181 130998662 -122257921 - MER4-int LTR ERV1 -335 4545 2468 189 0 0 0 chr2 130998714 130998735 -122257848 + (CA)n Simple_repeat Simple_repeat 2 22 0 565 247 16 42 chr2 130998787 130998977 -122257606 - MER4-int LTR ERV1 -2866 3732 3548 5619 86 49 9 chr2 130999170 130999982 -122256601 - L1PA8A LINE L1 0 6131 5287 350 175 12 0 chr2 131000072 131000152 -122256431 + (TA)n Simple_repeat Simple_repeat 2 82 0 764 196 92 18 chr2 131000283 131000446 -122256137 - MER3 DNA MER1_type 0 209 35 186 71 0 0 chr2 131000470 131000498 -122256085 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1844 117 8 0 chr2 131000504 131000753 -122255830 - AluSg1 SINE Alu -58 251 1 517 273 156 10 chr2 131001740 131001945 -122254638 + MIR SINE MIR 22 256 -6 534 121 84 0 chr2 131002112 131002195 -122254388 + MER58B DNA MER1_type 252 341 0 241 246 92 62 chr2 131002198 131002246 -122254337 + L1MEd LINE L1 31 76 -6043 1858 148 3 30 chr2 131002246 131002551 -122254032 + AluSq SINE Alu 1 297 -16 241 246 92 62 chr2 131002551 131002632 -122253951 + L1MEd LINE L1 76 164 -5955 272 249 69 95 chr2 131002690 131002879 -122253704 - L2 LINE L2 -13 3300 3117 1616 208 10 3 chr2 131003210 131003547 -122253036 - AluJo SINE Alu 0 341 3 1351 194 6 54 chr2 131003608 131003922 -122252661 - AluJo SINE Alu -13 299 1 214 363 10 0 chr2 131005048 131005150 -122251433 + MIR SINE MIR 87 189 -73 1062 269 95 23 chr2 131005532 131005923 -122250660 - MLT1J1 LTR MaLR -25 421 3 255 272 98 0 chr2 131005955 131006047 -122250536 - MLT1J1-int LTR MaLR -22 1713 1613 2271 198 56 19 chr2 131006565 131007051 -122249532 - LTR22 LTR ERVK -5 504 1 297 329 0 0 chr2 131007249 131007331 -122249252 - L2 LINE L2 0 3272 3191 456 288 128 0 chr2 131008608 131008851 -122247732 + L1ME4a LINE L1 5651 5924 -197 1651 124 0 0 chr2 131010685 131010910 -122245673 - AluSc SINE Alu -84 225 1 21 36 0 0 chr2 131011640 131011668 -122244915 + AT_rich Low_complexity Low_complexity 1 28 0 304 190 0 0 chr2 131012165 131012223 -122244360 - L2 LINE L2 -55 3258 3201 555 92 0 0 chr2 131012348 131012424 -122244159 + Tigger1 DNA MER2_type 938 1013 -1405 1150 171 5 20 chr2 131012426 131012625 -122243958 + AluJb SINE Alu 85 280 -32 305 24 24 0 chr2 131012626 131012668 -122243915 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 9508 108 30 16 chr2 131012671 131013946 -122242637 + Tigger1 DNA MER2_type 1002 2300 -118 3573 34 0 2 chr2 131013946 131014363 -122242220 - L1PA5 LINE L1 -2 6152 5737 9508 108 30 16 chr2 131014363 131014484 -122242099 + Tigger1 DNA MER2_type 2300 2418 0 2482 141 44 7 chr2 131014692 131015103 -122241480 + MSTB LTR MaLR 1 426 0 770 189 6 0 chr2 131015256 131015431 -122241152 + (ATG)n Simple_repeat Simple_repeat 3 178 0 608 215 15 18 chr2 131015445 131015575 -122241008 + (ATG)n Simple_repeat Simple_repeat 1 130 -546 2167 176 10 30 chr2 131015575 131015979 -122240604 + MSTD LTR MaLR 1 396 0 608 215 15 18 chr2 131015979 131016124 -122240459 + (ATG)n Simple_repeat Simple_repeat 130 676 0 295 250 115 19 chr2 131016196 131016300 -122240283 + MIR SINE MIR 20 133 -129 2364 83 10 22 chr2 131016740 131017052 -122239531 - AluSp SINE Alu -5 308 1 265 136 0 0 chr2 131017091 131017135 -122239448 + MIR SINE MIR 86 129 -79 236 351 162 0 chr2 131018879 131019033 -122237550 - MIR SINE MIR -6 256 78 810 269 68 64 chr2 131021668 131022386 -122234197 + L1MEd LINE L1 723 1478 -4862 1812 54 0 9 chr2 131022430 131022651 -122233932 + AluY SINE Alu 79 297 -14 1233 88 35 0 chr2 131022655 131022825 -122233758 + AluSg/x SINE Alu 132 307 -5 233 180 33 16 chr2 131022846 131022907 -122233676 + L1MEd LINE L1 1515 1576 -4639 2100 101 3 14 chr2 131023128 131023424 -122233159 + AluSp SINE Alu 1 293 -20 364 233 78 47 chr2 131023566 131023798 -122232785 + L1MEd LINE L1 2036 2274 -4122 2059 132 10 0 chr2 131023969 131024265 -122232318 + AluSx SINE Alu 1 299 -13 335 313 97 6 chr2 131024290 131024641 -122231942 + L1MEd LINE L1 2415 2797 -3418 1416 26 0 0 chr2 131024641 131024795 -122231788 + SVA Other Other 1230 1383 -3 673 267 53 42 chr2 131024812 131025190 -122231393 + L1MEd LINE L1 2785 3166 -3049 1730 189 57 61 chr2 131025221 131025645 -122230938 + MLT1D LTR MaLR 84 505 0 491 261 112 67 chr2 131025646 131025960 -122230623 - MLT1H LTR MaLR -221 328 1 678 278 134 0 chr2 131025968 131026245 -122230338 + L1ME3A LINE L1 5595 5908 -262 1289 197 100 17 chr2 131026245 131026545 -122230038 + MLT1B LTR MaLR 66 390 0 1292 114 5 16 chr2 131026710 131026726 -122229857 + AluSg/x SINE Alu 118 133 -177 2204 68 0 75 chr2 131026726 131027048 -122229535 + AluY SINE Alu 1 298 -13 1292 114 5 16 chr2 131027048 131027224 -122229359 + AluSg/x SINE Alu 133 308 -2 2294 73 0 11 chr2 131027667 131027976 -122228607 - AluY SINE Alu 0 306 1 1774 142 4 0 chr2 131028036 131028296 -122228287 - AluSx SINE Alu -17 295 35 364 235 39 20 chr2 131028654 131028756 -122227827 + LTR67 LTR ERVL 454 557 0 420 204 244 9 chr2 131029078 131029299 -122227284 + LTR50 LTR ERVL 6 278 -517 303 255 120 41 chr2 131029306 131029516 -122227067 + LTR33A LTR ERVL 234 471 -52 2451 61 0 10 chr2 131029516 131029813 -122226770 - AluY SINE Alu -17 294 1 303 255 120 41 chr2 131029813 131029869 -122226714 + LTR33A LTR ERVL 471 521 -2 2188 115 7 3 chr2 131030051 131030346 -122226237 - AluSc SINE Alu -13 296 1 699 288 82 9 chr2 131030477 131030855 -122225728 + L1MC/D LINE L1 5192 5603 -706 623 248 7 7 chr2 131030862 131031003 -122225580 - MIR SINE MIR -84 178 38 413 233 128 12 chr2 131031053 131031225 -122225358 + L1MC/D LINE L1 5616 5807 -2001 575 267 113 36 chr2 131031975 131032030 -122224553 + L1MDa LINE L1 1258 1307 -5119 2487 79 0 0 chr2 131032030 131032334 -122224249 + AluY SINE Alu 1 304 -7 575 267 113 36 chr2 131032334 131032705 -122223878 + L1MDa LINE L1 1307 1865 -4561 875 104 0 22 chr2 131032897 131033031 -122223552 + MER57-int LTR ERV1 5012 5142 -2395 2072 117 7 10 chr2 131033361 131033651 -122222932 - AluSq SINE Alu -24 289 1 231 36 0 0 chr2 131033651 131033679 -122222904 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 1643 163 7 18 chr2 131033682 131033965 -122222618 - AluJo SINE Alu -32 280 1 2292 87 24 9 chr2 131034795 131035130 -122221453 + MER57-int LTR ERV1 4832 5171 -2366 1249 228 198 67 chr2 131035897 131036315 -122220268 + HAL1 LINE L1 849 1210 -1297 2732 16 7 0 chr2 131036315 131036620 -122219963 + AluYb8 SINE Alu 1 307 -11 1249 228 198 67 chr2 131036620 131037209 -122219374 + HAL1 LINE L1 1210 1989 -518 1121 101 0 20 chr2 131037222 131037370 -122219213 - AluSq/x SINE Alu -168 145 1 1030 222 78 64 chr2 131038003 131038363 -122218220 - MLT1A1 LTR MaLR 0 365 1 2308 99 0 0 chr2 131038536 131038830 -122217753 - AluSq SINE Alu -17 296 3 549 241 128 86 chr2 131038850 131039498 -122217085 + L1MEd LINE L1 562 1236 -4883 445 287 90 17 chr2 131039676 131040027 -122216556 + LTR16C LTR ERVL 97 491 0 1744 105 8 4 chr2 131040109 131040347 -122216236 - AluSq SINE Alu -7 306 68 410 189 0 27 chr2 131040378 131040452 -122216131 - AluSq SINE Alu -240 73 2 421 181 138 32 chr2 131041025 131041119 -122215464 - Tigger3(Golem) DNA MER2_type -2924 105 2 387 0 0 0 chr2 131041120 131041163 -122215420 + (TG)n Simple_repeat Simple_repeat 2 44 0 292 242 121 64 chr2 131041222 131041486 -122215097 - L1ME4a LINE L1 -81 6040 5762 441 236 84 63 chr2 131041596 131041787 -122214796 + L2 LINE L2 3112 3306 -7 213 94 0 0 chr2 131041787 131041819 -122214764 + (TGGA)n Simple_repeat Simple_repeat 1 32 0 2243 103 7 3 chr2 131042101 131042391 -122214192 - AluSq SINE Alu -22 291 1 2101 124 0 3 chr2 131042554 131042837 -122213746 + AluSx SINE Alu 2 283 -29 4518 157 47 25 chr2 131042902 131044300 -122212283 + L1MB4 LINE L1 4745 6180 0 2323 95 6 22 chr2 131044309 131044626 -122211957 + AluSp SINE Alu 1 312 -1 22 56 0 0 chr2 131044652 131044688 -122211895 + AT_rich Low_complexity Low_complexity 1 36 0 2396 75 0 7 chr2 131044946 131045240 -122211343 - AluY SINE Alu -2 309 18 25 75 0 0 chr2 131046879 131046932 -122209651 + GC_rich Low_complexity Low_complexity 1 53 0 32 43 0 0 chr2 131047005 131047051 -122209532 + GC_rich Low_complexity Low_complexity 1 46 0 338 316 187 17 chr2 131048097 131048479 -122208104 + L2 LINE L2 2589 3034 -238 2383 82 7 7 chr2 131048610 131048915 -122207668 + AluY SINE Alu 1 305 -6 1337 128 41 32 chr2 131048918 131049137 -122207446 + AluSc SINE Alu 82 302 -7 499 102 23 11 chr2 131049148 131049236 -122207347 + (GGAA)n Simple_repeat Simple_repeat 4 92 0 502 288 14 7 chr2 131050503 131050642 -122205941 + MIR SINE MIR 36 175 -87 320 219 0 0 chr2 131055763 131055827 -122200756 - Ricksha_b DNA DNA -13 1241 1178 4584 140 48 66 chr2 131055836 131056831 -122199752 - Ricksha_b DNA DNA -39 1215 239 513 234 24 0 chr2 131056834 131056958 -122199625 - Ricksha_b DNA DNA -1125 129 3 576 167 58 0 chr2 131057122 131057242 -122199341 - MSTB1 LTR MaLR 0 432 306 1716 131 16 52 chr2 131057243 131057549 -122199034 - AluJb SINE Alu -5 307 13 322 314 119 0 chr2 131058490 131058649 -122197934 - MIR SINE MIR -65 197 20 208 232 29 72 chr2 131058813 131058882 -122197701 + L2 LINE L2 3206 3271 -1 203 333 0 0 chr2 131059770 131059836 -122196747 + GA-rich Low_complexity Low_complexity 2 67 0 1192 221 149 2 chr2 131060034 131060451 -122196132 - LTR54B LTR ERV1 -2 496 19 768 219 11 27 chr2 131060578 131060765 -122195818 - MER4D LTR ERV1 0 903 720 719 196 18 42 chr2 131060818 131061005 -122195578 - LTR39 LTR ERV1 -159 620 401 1571 137 14 48 chr2 131061042 131061122 -122195461 - MER49 LTR ERV1 -641 282 201 2174 140 0 0 chr2 131061122 131061414 -122195169 + AluJb SINE Alu 6 297 -15 1571 137 14 48 chr2 131061414 131061625 -122194958 - MER49 LTR ERV1 -722 201 1 320 243 153 0 chr2 131061696 131061807 -122194776 - L1MC/D LINE L1 -1980 5828 5701 1982 226 62 80 chr2 131062042 131062450 -122194133 + L1MCb LINE L1 3 417 -5708 2579 53 3 0 chr2 131062450 131062750 -122193833 - AluY SINE Alu -10 301 1 1982 226 62 80 chr2 131062750 131063032 -122193551 + L1MCb LINE L1 417 703 -5422 2395 77 13 0 chr2 131063032 131063331 -122193252 + AluY SINE Alu 1 303 -8 1982 226 62 80 chr2 131063331 131063949 -122192634 + L1MCb LINE L1 703 1274 -4851 5934 214 41 48 chr2 131063950 131064448 -122192135 + L1MB4 LINE L1 2917 3417 -2729 2272 125 0 3 chr2 131064448 131064760 -122191823 + AluSx SINE Alu 1 311 -1 5934 214 41 48 chr2 131064760 131065063 -122191520 + L1MB4 LINE L1 3417 3720 -2426 2216 97 28 0 chr2 131065063 131065353 -122191230 + AluSq SINE Alu 1 298 -15 5934 214 41 48 chr2 131065353 131066094 -122190489 + L1MB4 LINE L1 3720 4464 -1682 2510 69 0 0 chr2 131066094 131066397 -122190186 + AluY SINE Alu 1 303 -8 2056 115 3 18 chr2 131066407 131066713 -122189870 + AluSp SINE Alu 1 302 0 5934 214 41 48 chr2 131066713 131066739 -122189844 + L1MB4 LINE L1 4473 4498 -1648 2603 49 0 0 chr2 131066739 131067047 -122189536 - AluY SINE Alu -3 308 1 5934 214 41 48 chr2 131067047 131067347 -122189236 + L1MB4 LINE L1 4498 4788 -1358 3354 180 31 68 chr2 131068620 131069245 -122187338 + L1MB4 LINE L1 4823 5469 -711 2392 81 7 0 chr2 131069245 131069542 -122187041 + AluSg SINE Alu 1 299 -11 3354 180 31 68 chr2 131069542 131069731 -122186852 + L1MB4 LINE L1 5469 5663 -517 2109 104 26 32 chr2 131069731 131070039 -122186544 + AluSx SINE Alu 1 306 -6 3354 180 31 68 chr2 131070039 131070536 -122186047 + L1MB4 LINE L1 5663 6089 -91 2204 177 47 113 chr2 131070537 131071309 -122185274 - LTR8A LTR ERV1 0 691 11 578 125 0 0 chr2 131071317 131071413 -122185170 + L1MB4 LINE L1 6085 6180 0 637 222 52 117 chr2 131071421 131071604 -122184979 + L1MCb LINE L1 1258 1451 -5113 1508 165 72 72 chr2 131071604 131071649 -122184934 - THE1C LTR MaLR 0 375 331 2411 71 3 0 chr2 131071649 131071945 -122184638 + AluY SINE Alu 1 297 -14 1508 165 72 72 chr2 131071945 131072274 -122184309 - THE1C LTR MaLR -43 332 1 637 222 52 117 chr2 131072274 131072292 -122184291 + L1MCb LINE L1 1451 1469 -5095 2526 63 0 0 chr2 131072292 131072593 -122183990 + AluY SINE Alu 1 301 -10 637 222 52 117 chr2 131072593 131072867 -122183716 + L1MCb LINE L1 1469 1703 -4861 2185 139 0 0 chr2 131072878 131073173 -122183410 + AluSx SINE Alu 1 295 -17 1628 250 89 38 chr2 131073173 131073908 -122182675 + L1MCb LINE L1 2058 2839 -3725 2179 119 3 0 chr2 131073908 131074202 -122182381 - AluSx SINE Alu -17 295 1 1628 250 89 38 chr2 131074202 131074592 -122181991 + L1MCb LINE L1 2839 3208 -3356 * 2414 193 65 38 chr2 131074581 131075194 -122181389 + L1MC3 LINE L1 6354 6983 -802 2624 194 21 46 chr2 131075197 131075848 -122180735 + L1MC3 LINE L1 7144 7778 -7 405 0 0 0 chr2 131075848 131075857 -122180726 + (TG)n Simple_repeat Simple_repeat 1 54 0 405 0 0 0 chr2 131075857 131075902 -122180681 + (TG)n Simple_repeat Simple_repeat 2 46 0 2127 102 34 14 chr2 131075927 131076221 -122180362 - AluY SINE Alu -11 300 1 1601 214 15 38 chr2 131076628 131077025 -122179558 - MLT1B LTR MaLR 0 390 3 2313 139 57 34 chr2 131077286 131077357 -122179226 - MSTA LTR MaLR 0 428 360 2185 97 4 0 chr2 131077357 131077636 -122178947 + AluSx SINE Alu 1 280 -32 919 66 15 7 chr2 131077638 131077774 -122178809 + (GGAA)n Simple_repeat Simple_repeat 4 140 0 198 0 0 0 chr2 131077776 131077798 -122178785 + (GAAAA)n Simple_repeat Simple_repeat 1 22 0 2313 139 57 34 chr2 131077798 131078138 -122178445 - MSTA LTR MaLR -68 360 1 536 268 105 29 chr2 131078329 131078635 -122177948 - Charlie2 DNA MER1_type -43 2819 2491 2209 111 0 13 chr2 131078856 131079191 -122177392 + AluSg SINE Alu 2 310 0 205 314 0 0 chr2 131079878 131079948 -122176635 + MIR SINE MIR 188 257 -5 400 76 167 0 chr2 131080062 131080128 -122176455 + MLT1B LTR MaLR 6 82 -308 2204 91 0 11 chr2 131080129 131080436 -122176147 - AluY SINE Alu 0 304 1 1829 155 11 0 chr2 131080477 131080742 -122175841 - AluJb SINE Alu -14 298 31 927 158 0 0 chr2 131080890 131081055 -122175528 + (TGGA)n Simple_repeat Simple_repeat 1 165 0 321 102 0 0 chr2 131082703 131082752 -122173831 - L1MB8 LINE L1 -5 6173 6125 3667 203 61 18 chr2 131082774 131084465 -122172118 - L1MB7 LINE L1 -36 6148 4392 598 229 89 10 chr2 131084591 131084811 -122171772 - L1MC/D LINE L1 -701 5469 5255 201 59 29 0 chr2 131084844 131084878 -122171705 + (TTTTG)n Simple_repeat Simple_repeat 1 180 0 1985 94 35 42 chr2 131084878 131085023 -122171560 - AluSc SINE Alu -5 304 159 2509 82 0 0 chr2 131085023 131085329 -122171254 - AluY SINE Alu -5 306 1 1985 94 35 42 chr2 131085329 131085463 -122171120 - AluSc SINE Alu -150 159 1 641 331 114 6 chr2 131085476 131086198 -122170385 - L1MC/D LINE L1 -1007 5139 4340 362 256 11 0 chr2 131086657 131086747 -122169836 + MER81 DNA DNA 24 114 0 2479 61 0 6 chr2 131087472 131087785 -122168798 - AluY SINE Alu 0 311 1 2301 88 0 0 chr2 131087841 131088147 -122168436 - AluSq SINE Alu -7 306 1 14911 179 56 24 chr2 131090256 131091453 -122165130 + ERVL LTR ERVL 452 1609 -4155 2138 217 27 5 chr2 131091453 131091900 -122164683 - MER65C LTR ERV1 -4 457 1 14911 179 56 24 chr2 131091900 131092343 -122164240 + ERVL LTR ERVL 1609 2036 -3728 1950 167 26 15 chr2 131092343 131092593 -122163990 - MER7A DNA MER2_type -2694 344 89 2216 119 0 13 chr2 131092593 131092905 -122163678 + AluSx SINE Alu 1 308 -4 1950 167 26 15 chr2 131092905 131092996 -122163587 - MER7A DNA MER2_type -2949 89 1 14911 179 56 24 chr2 131092996 131094436 -122162147 + ERVL LTR ERVL 2036 3632 -2132 2977 167 18 72 chr2 131094436 131094540 -122162043 + L1MB2 LINE L1 4927 5035 -1136 2207 117 0 0 chr2 131094540 131094839 -122161744 + AluSx SINE Alu 1 299 -13 2977 167 18 72 chr2 131094839 131095001 -122161582 + L1MB2 LINE L1 5035 5204 -967 2444 57 0 25 chr2 131095001 131095315 -122161268 + AluY SINE Alu 1 306 -5 2977 167 18 72 chr2 131095315 131095491 -122161092 + L1MB2 LINE L1 5204 5388 -783 2202 109 0 0 chr2 131095491 131095784 -122160799 + AluSx SINE Alu 1 293 -19 2977 167 18 72 chr2 131095784 131096182 -122160401 + L1MB2 LINE L1 5388 5806 -365 216 0 0 0 chr2 131096182 131096206 -122160377 + (TG)n Simple_repeat Simple_repeat 2 25 0 2977 167 18 72 chr2 131096206 131096221 -122160362 + L1MB2 LINE L1 5806 5820 -351 2149 111 0 19 chr2 131096221 131096537 -122160046 - AluSx SINE Alu -2 310 1 2977 167 18 72 chr2 131096537 131096894 -122159689 + L1MB2 LINE L1 5820 6169 -2 1302 178 21 31 chr2 131096899 131097186 -122159397 + L1MB8 LINE L1 5894 6177 -1 2629 42 0 0 chr2 131097573 131097881 -122158702 - AluY SINE Alu -3 308 1 447 259 117 25 chr2 131097989 131098186 -122158397 - MIR SINE MIR -17 245 31 1341 144 29 7 chr2 131099482 131099760 -122156823 + L1MB7 LINE L1 5558 5841 -343 334 317 166 0 chr2 131099760 131099978 -122156605 + L2 LINE L2 2758 3005 -308 32 33 0 33 chr2 131100291 131100326 -122156257 + AT_rich Low_complexity Low_complexity 1 36 -23 2137 77 0 18 chr2 131100326 131100495 -122156088 - AluSc SINE Alu 0 300 137 2124 102 0 45 chr2 131100495 131100808 -122155775 - AluSq SINE Alu -14 299 1 2137 77 0 18 chr2 131100808 131100943 -122155640 - AluSc SINE Alu -163 137 1 32 33 0 33 chr2 131100943 131100967 -122155616 + AT_rich Low_complexity Low_complexity 36 59 0 5992 108 234 1 chr2 131101500 131102904 -122153679 - L1P2 LINE L1 -648 5507 3745 2897 60 0 0 chr2 131102887 131103290 -122153293 - L1PA6 LINE L1 -1 6153 5751 * 1945 110 7 36 chr2 131103294 131103595 -122152988 - AluSx SINE Alu -20 292 1 627 141 0 23 chr2 131103595 131103723 -122152860 - L1P2 LINE L1 -2359 3787 3663 485 101 0 38 chr2 131103725 131103804 -122152779 - AluJo SINE Alu -1 311 236 844 179 0 21 chr2 131103809 131103954 -122152629 - AluJo SINE Alu -166 146 5 2268 79 0 20 chr2 131103986 131104290 -122152293 + AluY SINE Alu 1 298 -13 498 274 9 58 chr2 131105127 131105271 -122151312 - L1MEd LINE L1 -5903 216 85 2044 88 58 0 chr2 131105271 131105566 -122151017 - AluSp SINE Alu -1 312 1 498 274 9 58 chr2 131105566 131105647 -122150936 - L1MEd LINE L1 -6034 85 2 645 344 58 20 chr2 131106702 131106996 -122149587 + L1ME LINE L1 2738 3042 -3104 1423 171 4 12 chr2 131106997 131107242 -122149341 + AluJb SINE Alu 1 243 -69 204 97 0 0 chr2 131107242 131107273 -122149310 + (A)n Simple_repeat Simple_repeat 1 31 0 2325 78 0 3 chr2 131107334 131107630 -122148953 - AluY SINE Alu -16 295 1 266 324 75 21 chr2 131107702 131108337 -122148246 + L1ME LINE L1 5186 5881 -289 354 45 0 0 chr2 131108661 131108705 -122147878 + (TTTC)n Simple_repeat Simple_repeat 1 44 0 2107 96 0 18 chr2 131108708 131108988 -122147595 - AluSx SINE Alu -35 277 3 2055 135 3 3 chr2 131109015 131109327 -122147256 - AluSx SINE Alu 0 312 1 653 255 140 18 chr2 131109460 131109746 -122146837 - L2 LINE L2 -140 3173 2853 1858 198 34 0 chr2 131111739 131112118 -122144465 - L1MA9 LINE L1 0 6312 5921 747 256 1 6 chr2 131112121 131112280 -122144303 - MIR SINE MIR -52 210 56 261 57 0 0 chr2 131112280 131112315 -122144268 + (ATATG)n Simple_repeat Simple_repeat 5 39 0 747 256 1 6 chr2 131112315 131112332 -122144251 - MIR SINE MIR -206 56 40 193 274 20 0 chr2 131114915 131114966 -122141617 + MIR3 SINE MIR 111 162 -46 324 0 0 0 chr2 131115440 131115476 -122141107 + (CA)n Simple_repeat Simple_repeat 1 36 0 349 78 0 0 chr2 131117371 131117422 -122139161 - 5S rRNA rRNA -70 51 1 372 280 44 0 chr2 131117539 131117678 -122138905 - MIR SINE MIR -62 146 35 295 75 0 0 chr2 131119338 131119378 -122137205 - tRNA-Gln-CAA tRNA tRNA -35 40 1 206 230 68 27 chr2 131120301 131120375 -122136208 + L2 LINE L2 3188 3264 -49 360 272 67 42 chr2 131120376 131120503 -122136080 + L2 LINE L2 2323 2460 -854 2359 78 7 3 chr2 131120503 131120812 -122135771 + AluSg SINE Alu 1 310 0 360 272 67 42 chr2 131120812 131120923 -122135660 + L2 LINE L2 2460 2567 -747 2239 65 10 10 chr2 131120968 131121261 -122135322 + AluY SINE Alu 1 293 -18 358 261 117 0 chr2 131122008 131122119 -122134464 - MIR SINE MIR -84 178 55 184 295 128 0 chr2 131123061 131123139 -122133444 + MIR3 SINE MIR 97 184 -24 1953 154 6 6 chr2 131123705 131124016 -122132567 + AluSx SINE Alu 1 311 -1 375 23 0 0 chr2 131124027 131124071 -122132512 + (GGAA)n Simple_repeat Simple_repeat 3 46 0 322 309 81 16 chr2 131124071 131124194 -122132389 + L1M4 LINE L1 3073 3203 -2943 181 357 36 45 chr2 131124365 131124459 -122132124 - L3 LINE CR1 -740 837 743 2333 72 0 16 chr2 131124459 131124764 -122131819 + AluY SINE Alu 2 301 -10 181 357 36 45 chr2 131124764 131124781 -122131802 - L3 LINE CR1 -834 743 727 240 323 21 0 chr2 131125125 131125218 -122131365 + LTR67 LTR ERVL 461 555 -2 694 257 57 0 chr2 131125818 131125993 -122130590 + MER5A DNA MER1_type 1 185 -4 487 192 102 40 chr2 131126660 131126837 -122129746 + ORSL DNA AcHobo 1 188 -87 326 351 40 45 chr2 131127001 131127203 -122129380 + MIR3 SINE MIR 1 201 -7 219 319 88 0 chr2 131128859 131128950 -122127633 + MIR SINE MIR 54 152 -56 2244 101 0 13 chr2 131129011 131129327 -122127256 + AluSx SINE Alu 1 312 0 293 67 0 22 chr2 131129327 131129372 -122127211 + (GGAA)n Simple_repeat Simple_repeat 1 44 0 251 313 39 16 chr2 131129803 131129931 -122126652 - MERVL LTR ERVL -1773 3712 3582 438 322 84 39 chr2 131130175 131130600 -122125983 - MERVL LTR ERVL -2515 3249 2764 293 233 0 38 chr2 131130791 131130924 -122125659 + (CA)n Simple_repeat Simple_repeat 1 128 0 264 339 44 22 chr2 131130935 131131118 -122125465 - MERVL LTR ERVL -3115 2539 2353 634 333 24 37 chr2 131131158 131131539 -122125044 - MERVL LTR ERVL -3436 2328 1953 329 224 0 0 chr2 131131660 131131718 -122124865 - L2 LINE L2 -5 3308 3251 2206 125 0 3 chr2 131131760 131132055 -122124528 - AluSg SINE Alu -16 294 1 213 39 0 0 chr2 131135533 131135559 -122121024 + (TA)n Simple_repeat Simple_repeat 2 27 0 2035 104 18 7 chr2 131135559 131135838 -122120745 - AluSq SINE Alu -28 285 4 1261 101 75 25 chr2 131135957 131136156 -122120427 + AluJo SINE Alu 1 209 -103 1336 81 0 0 chr2 131136156 131136316 -122120267 - AluSc SINE Alu -149 160 1 468 263 168 26 chr2 131137191 131137644 -122118939 - MER90 LTR ERV1 -1 613 97 287 333 63 0 chr2 131138158 131138284 -122118299 + MIR SINE MIR 78 211 -51 180 291 23 47 chr2 131139065 131139151 -122117432 - L2 LINE L2 -16 3256 3173 2241 108 14 0 chr2 131140290 131140586 -122115997 - AluSx SINE Alu -12 300 1 256 298 237 0 chr2 131142598 131142712 -122113871 + MIR SINE MIR 51 191 -71 292 252 98 8 chr2 131142818 131142941 -122113642 - L2 LINE L2 -1 3271 3138 339 309 7 50 chr2 131144638 131144777 -122111806 + MIR SINE MIR 57 189 -73 240 274 75 28 chr2 131144934 131145040 -122111543 - L2 LINE L2 -34 3279 3169 1578 279 68 12 chr2 131145123 131145570 -122111013 + L1MB8 LINE L1 256 677 -6182 423 0 0 0 chr2 131145570 131145617 -122110966 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2166 78 11 18 chr2 131145619 131145902 -122110681 - AluY SINE Alu -30 281 1 1578 279 68 12 chr2 131145902 131146014 -122110569 + L1MB8 LINE L1 677 849 -6010 1761 197 50 28 chr2 131146014 131146511 -122110072 - MER77 LTR ERV1 0 605 18 1456 239 121 21 chr2 131146578 131147150 -122109433 + L1MB8 LINE L1 1259 1887 -4968 556 323 0 0 chr2 131147131 131147320 -122109263 + L1MB8 LINE L1 2376 2564 -4574 * 1066 35 0 7 chr2 131147402 131147544 -122109039 + L1PA4 LINE L1 6015 6155 0 2579 54 0 32 chr2 131147668 131147981 -122108602 + AluY SINE Alu 1 303 -8 1737 224 78 62 chr2 131148051 131148511 -122108072 + L1MB8 LINE L1 2625 3088 -3869 2260 88 9 31 chr2 131148511 131148831 -122107752 - AluSp SINE Alu 0 313 1 1737 224 78 62 chr2 131148831 131149273 -122107310 + L1MB8 LINE L1 3088 3521 -3436 1082 97 0 0 chr2 131149281 131149415 -122107168 + AluY SINE Alu 1 134 -177 2128 136 3 3 chr2 131149415 131149725 -122106858 + AluSx SINE Alu 1 310 -2 3480 211 34 60 chr2 131149729 131149837 -122106746 + L1MB8 LINE L1 5843 5952 -1037 2158 120 10 0 chr2 131149837 131150128 -122106455 + AluSg SINE Alu 1 294 -16 3480 211 34 60 chr2 131150128 131150193 -122106390 + L1MB8 LINE L1 5952 6017 -972 811 168 0 0 chr2 131150193 131150324 -122106259 + FLAM_C SINE Alu 1 131 -2 3480 211 34 60 chr2 131150324 131150391 -122106192 + L1MB8 LINE L1 6017 6084 -905 1236 112 15 0 chr2 131150391 131150588 -122105995 + L1PB1 LINE L1 5951 6150 -1 3480 211 34 60 chr2 131150588 131151153 -122105430 + L1MB8 LINE L1 6084 6662 -327 2500 65 13 7 chr2 131151153 131151462 -122105121 + AluY SINE Alu 1 311 0 3480 211 34 60 chr2 131151462 131151693 -122104890 + L1MB8 LINE L1 6662 6838 -151 2143 125 7 3 chr2 131151693 131151997 -122104586 + AluSx SINE Alu 1 305 -7 3480 211 34 60 chr2 131151997 131152134 -122104449 + L1MB8 LINE L1 6838 6977 -12 219 352 23 0 chr2 131152560 131152648 -122103935 - L3 LINE CR1 -147 1430 1341 446 315 188 20 chr2 131152872 131152955 -122103628 - L3 LINE CR1 -244 1333 1265 243 0 0 0 chr2 131152955 131152982 -122103601 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 446 315 188 20 chr2 131152982 131153292 -122103291 - L3 LINE CR1 -312 1265 874 1581 186 3 45 chr2 131153339 131153650 -122102933 + AluSq SINE Alu 1 298 -15 2425 262 34 18 chr2 131153734 131154475 -122102108 - L1M4 LINE L1 -2097 4049 3297 2364 95 7 0 chr2 131154481 131154786 -122101797 - AluSg SINE Alu -3 307 1 302 123 31 0 chr2 131154787 131154852 -122101731 - L1M4 LINE L1 -3185 2961 2895 2439 70 33 0 chr2 131155174 131155475 -122101108 - AluY SINE Alu 0 311 1 217 288 111 0 chr2 131155644 131155797 -122100786 - L2 LINE L2 -213 3059 2890 893 243 87 1 chr2 131155941 131156367 -122100216 - MLT1D LTR MaLR -1 504 3 305 326 107 30 chr2 131156382 131156719 -122099864 - L2 LINE L2 -573 2741 2379 2407 90 0 0 chr2 131158505 131158795 -122097788 + AluSq SINE Alu 1 290 -23 341 157 0 0 chr2 131158798 131158849 -122097734 - L1MC4 LINE L1 -1339 6703 6653 537 252 82 7 chr2 131160343 131160490 -122096093 + MIR SINE MIR 25 182 -80 2433 84 10 3 chr2 131160559 131160868 -122095715 + AluSq SINE Alu 1 311 -2 1595 192 73 3 chr2 131161817 131162206 -122094377 - L1MD1 LINE L1 -3 6239 5825 249 270 157 0 chr2 131162203 131162318 -122094265 - L1M4 LINE L1 -6407 135 3 * 1143 200 132 51 chr2 131162585 131162995 -122093588 - MSTB2 LTR MaLR 0 457 15 351 316 115 14 chr2 131163584 131163646 -122092937 - MIR SINE MIR -8 254 200 2444 60 13 3 chr2 131163646 131163944 -122092639 - AluY SINE Alu -10 301 1 351 316 115 14 chr2 131163944 131164090 -122092493 - MIR SINE MIR -62 200 25 542 195 23 0 chr2 131164532 131164660 -122091923 - L1MA8 LINE L1 0 6291 6161 971 163 0 12 chr2 131164753 131164913 -122091670 + FRAM SINE Alu 1 157 -19 450 279 73 81 chr2 131164926 131165198 -122091385 + L2 LINE L2 3025 3294 -19 1323 205 119 48 chr2 131165340 131165363 -122091220 - LTR40c LTR ERVL -15 450 430 777 253 103 0 chr2 131165363 131165557 -122091026 - MER58C DNA MER1_type -1 214 1 1323 205 119 48 chr2 131165557 131165952 -122090631 - LTR40c LTR ERVL -35 430 2 2576 142 24 2 chr2 131166569 131167027 -122089556 - L1MA8 LINE L1 -10 6281 5814 1014 142 0 0 chr2 131167027 131167175 -122089408 - FRAM SINE Alu -7 169 22 514 167 26 26 chr2 131167175 131167301 -122089282 - L1MA7 LINE L1 -323 5831 5706 238 225 106 20 chr2 131167385 131167486 -122089097 - MIR SINE MIR -105 103 4 180 358 25 0 chr2 131167493 131167574 -122089009 - MIR SINE MIR -80 128 46 1791 186 21 0 chr2 131167791 131168082 -122088501 - AluJo SINE Alu -15 297 1 26 0 0 0 chr2 131168082 131168108 -122088475 + AT_rich Low_complexity Low_complexity 1 26 0 270 329 141 52 chr2 131168114 131168278 -122088305 + MIR SINE MIR 2 191 -71 1775 123 71 0 chr2 131168278 131168566 -122088017 - AluSx SINE Alu 0 312 2 270 329 141 52 chr2 131168566 131168614 -122087969 + MIR SINE MIR 191 233 -29 * 617 291 11 11 chr2 131168611 131168793 -122087790 - L2 LINE L2 -2603 711 530 1053 233 37 21 chr2 131169579 131169884 -122086699 - MLT1A1 LTR MaLR -42 348 1 599 251 123 5 chr2 131171053 131171256 -122085327 + MIR SINE MIR 32 258 -4 390 204 0 0 chr2 131171485 131171573 -122085010 + (CA)n Simple_repeat Simple_repeat 2 89 0 568 323 0 5 chr2 131171575 131171764 -122084819 + MIR SINE MIR 1 188 -74 232 301 35 44 chr2 131172149 131172262 -122084321 + MIR SINE MIR 103 214 -48 299 0 0 0 chr2 131172610 131172647 -122083936 - AluY SINE Alu -265 37 1 534 193 20 93 chr2 131172650 131172800 -122083783 - MSTD LTR MaLR -257 139 1 2375 97 0 6 chr2 131172812 131173123 -122083460 - AluSg SINE Alu -1 309 1 289 307 91 57 chr2 131173292 131173651 -122082932 - L1MEd LINE L1 -2207 3922 3543 2484 70 0 7 chr2 131173651 131173949 -122082634 + AluY SINE Alu 1 296 -15 289 307 91 57 chr2 131173949 131174042 -122082541 - L1MEd LINE L1 -2586 3543 3455 864 168 35 49 chr2 131174149 131174375 -122082208 - L1M4 LINE L1 -1308 4838 4616 1165 152 0 0 chr2 131174384 131174548 -122082035 + AluJb SINE Alu 136 299 -13 246 203 101 14 chr2 131174554 131174623 -122081960 - L1M4 LINE L1 -1538 4608 4534 * 258 293 42 28 chr2 131174615 131174827 -122081756 - L1MEd LINE L1 -2708 3421 3207 285 289 106 22 chr2 131175033 131175225 -122081358 - MLT1J2 LTR MaLR -244 206 1 773 247 72 39 chr2 131175227 131175393 -122081190 - L1MEd LINE L1 -2920 3209 3050 2082 109 28 0 chr2 131175393 131175678 -122080905 + AluSx SINE Alu 1 293 -19 773 247 72 39 chr2 131175678 131175968 -122080615 - L1MEd LINE L1 -3079 3050 2738 2435 90 0 13 chr2 131176019 131176331 -122080252 + AluSq SINE Alu 1 308 -5 562 263 76 81 chr2 131176619 131176731 -122079852 - L1MEd LINE L1 -4641 1669 1558 2247 93 0 3 chr2 131176731 131177033 -122079550 + AluSg SINE Alu 1 301 -9 562 263 76 81 chr2 131177033 131177482 -122079101 - L1MEd LINE L1 -4752 1558 1063 2100 119 0 0 chr2 131177482 131177777 -122078806 + AluSx SINE Alu 3 297 -15 562 263 76 81 chr2 131177777 131178022 -122078561 - L1MEd LINE L1 -5247 1063 818 192 200 0 0 chr2 131178023 131178063 -122078520 - MIR SINE MIR -45 217 178 278 291 51 0 chr2 131178349 131178428 -122078155 + L2 LINE L2 3154 3236 -36 1017 210 28 23 chr2 131178594 131178689 -122077894 - MER58A DNA MER1_type -2200 220 127 1638 214 45 16 chr2 131178689 131179068 -122077515 - MLT1B LTR MaLR 0 390 1 1017 210 28 23 chr2 131179068 131179186 -122077397 - MER58A DNA MER1_type -2293 127 6 297 185 251 0 chr2 131179221 131179326 -122077257 - AluJ/FLAM SINE Alu -226 76 6 1243 219 61 7 chr2 131179451 131179729 -122076854 - MER21B LTR ERV1 -51 812 520 326 275 0 0 chr2 131180564 131180633 -122075950 + L2 LINE L2 3241 3309 -4 247 294 39 0 chr2 131182136 131182151 -122074432 - L1MA10 LINE L1 -12 6322 6308 1598 227 78 34 chr2 131182151 131183236 -122073347 - L1ME1 LINE L1 -18 6408 5212 216 0 0 0 chr2 131183236 131183260 -122073323 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 1598 227 78 34 chr2 131183260 131183342 -122073241 - L1ME1 LINE L1 -1214 5212 5135 303 313 94 0 chr2 131183715 131183843 -122072740 - MIR SINE MIR -74 188 49 245 329 146 12 chr2 131184815 131184979 -122071604 - MIR SINE MIR -8 254 69 220 250 0 0 chr2 131185635 131185683 -122070900 + L2 LINE L2 3203 3250 -22 515 210 167 69 chr2 131186206 131186482 -122070101 - MLT1E2 LTR MaLR -323 303 1 296 218 160 89 chr2 131186484 131186709 -122069874 - L2 LINE L2 -93 3179 2939 1601 249 61 6 chr2 131187112 131187622 -122068961 - L1ME1 LINE L1 -3180 3226 2689 * 2167 239 43 3 chr2 131187609 131188194 -122068389 - L1ME1 LINE L1 -5095 1314 707 2271 90 0 0 chr2 131188721 131189021 -122067562 - AluSq SINE Alu -13 300 1 1207 267 61 8 chr2 131189041 131189401 -122067182 + MER74B LTR ERVL 234 612 -10 279 79 0 0 chr2 131189426 131189464 -122067119 + (TCCC)n Simple_repeat Simple_repeat 2 39 0 2124 205 43 48 chr2 131189664 131189760 -122066823 + L1ME4a LINE L1 4316 4411 -1735 2488 52 0 3 chr2 131189760 131190068 -122066515 + AluY SINE Alu 1 307 -4 2124 205 43 48 chr2 131190068 131190270 -122066313 + L1ME4a LINE L1 4411 4612 -1534 2160 99 3 0 chr2 131190270 131190563 -122066020 - AluSp SINE Alu -19 294 1 2124 205 43 48 chr2 131190563 131190873 -122065710 + L1ME4a LINE L1 4612 4922 -1224 750 260 107 44 chr2 131190980 131191001 -122065582 + L1ME4a LINE L1 5377 5395 -775 2167 110 0 0 chr2 131191001 131191300 -122065283 + AluSx SINE Alu 1 299 -13 750 260 107 44 chr2 131191300 131191662 -122064921 + L1ME4a LINE L1 5395 5784 -386 588 66 0 0 chr2 131191695 131191771 -122064812 - Alu SINE Alu -233 78 3 307 286 197 0 chr2 131192127 131192274 -122064309 + L1ME4a LINE L1 5851 6026 -95 358 192 27 14 chr2 131192669 131192742 -122063841 + AluJb SINE Alu 85 158 -144 1009 221 33 0 chr2 131193171 131193411 -122063172 + L1MD3 LINE L1 906 1153 -5387 3604 171 57 0 chr2 131193415 131194077 -122062506 + L1PA16 LINE L1 5453 6152 -14 307 222 28 0 chr2 131194400 131194472 -122062111 + L1MC5 LINE L1 7704 7777 -184 1118 225 9 95 chr2 131194481 131194903 -122061680 + L1MD3 LINE L1 4869 5254 -1286 1524 192 19 61 chr2 131194948 131195479 -122061104 - L1M3 LINE L1 -688 5495 4973 2671 190 28 46 chr2 131195599 131196033 -122060550 + L1MD3 LINE L1 5247 5687 -949 829 159 8 0 chr2 131196033 131196165 -122060418 + FLAM_A SINE Alu 1 133 0 2671 190 28 46 chr2 131196165 131196227 -122060356 + L1MD3 LINE L1 5687 5749 -887 1626 184 0 14 chr2 131196227 131196521 -122060062 + AluJo SINE Alu 1 290 -22 2671 190 28 46 chr2 131196521 131196994 -122059589 + L1MD3 LINE L1 5749 6194 -442 2831 212 48 133 chr2 131197096 131197435 -122059148 + L1MD3 LINE L1 6523 6889 -1500 234 103 103 0 chr2 131197435 131197474 -122059109 - Alu SINE Alu -196 104 62 2831 212 48 133 chr2 131197474 131198117 -122058466 + L1MD3 LINE L1 6889 7433 -956 2057 135 6 37 chr2 131198117 131198466 -122058117 - MER44D DNA MER2_type 0 609 2 2831 212 48 133 chr2 131198466 131198615 -122057968 + L1MD3 LINE L1 7433 7593 -796 289 317 16 0 chr2 131198704 131198827 -122057756 + L1ME LINE L1 5695 5819 -302 25 51 0 0 chr2 131198911 131198950 -122057633 + AT_rich Low_complexity Low_complexity 1 39 0 752 143 0 0 chr2 131198951 131199070 -122057513 - AluSg/x SINE Alu -9 303 185 1841 134 3 13 chr2 131199170 131199477 -122057106 + AluSg SINE Alu 7 310 0 2755 208 80 20 chr2 131199478 131200435 -122056148 + L1ME1 LINE L1 5164 6334 0 328 301 86 37 chr2 131200560 131200723 -122055860 + L1MEd LINE L1 2 172 -5947 1350 64 12 0 chr2 131200814 131200985 -122055598 + L1PA7 LINE L1 5980 6152 -2 1108 257 88 47 chr2 131201007 131201708 -122054875 + L1MEd LINE L1 2193 2956 -3173 1735 111 4 0 chr2 131203381 131203625 -122052958 - AluSx SINE Alu -65 247 3 232 269 0 0 chr2 131203628 131203695 -122052888 - L1M4 LINE L1 -958 5188 5122 263 217 87 0 chr2 131203794 131203863 -122052720 - L1M4 LINE L1 -1333 4813 4739 235 343 19 28 chr2 131203898 131204006 -122052577 - L2 LINE L2 -2 3270 3164 2453 55 0 3 chr2 131204270 131204579 -122052004 - AluY SINE Alu -3 308 1 1538 104 43 4 chr2 131204680 131204910 -122051673 - AluSg SINE Alu -18 292 54 347 251 137 66 chr2 131205158 131205341 -122051242 + MIR3 SINE MIR 9 204 -4 411 21 0 0 chr2 131205433 131205481 -122051102 + (TG)n Simple_repeat Simple_repeat 2 49 0 198 0 0 0 chr2 131205483 131205505 -122051078 + (GA)n Simple_repeat Simple_repeat 1 22 0 1065 238 59 18 chr2 131205538 131205879 -122050704 + L1M4 LINE L1 4641 4995 -1151 * 6223 220 98 34 chr2 131205876 131206408 -122050175 - L1MDa LINE L1 -4532 2008 1511 509 15 31 0 chr2 131206408 131206473 -122050110 + (TTTC)n Simple_repeat Simple_repeat 2 68 0 6223 220 98 34 chr2 131206473 131207103 -122049480 - L1MDa LINE L1 -5029 1511 923 3040 76 60 62 chr2 131207103 131207590 -122048993 - LTR19A LTR ERV1 0 486 1 6223 220 98 34 chr2 131207590 131208312 -122048271 - L1MDa LINE L1 -5617 923 3 697 316 70 34 chr2 131208305 131208858 -122047725 - HAL1 LINE L1 -1465 1042 470 * 930 154 55 16 chr2 131210126 131210308 -122046275 + MER5A DNA MER1_type 1 189 0 256 246 97 45 chr2 131210789 131210923 -122045660 - L2 LINE L2 -337 2976 2836 323 212 101 21 chr2 131211044 131211190 -122045393 - MIR SINE MIR -65 143 35 831 110 24 8 chr2 131211208 131211335 -122045248 - AluSq/x SINE Alu -182 131 3 736 247 120 27 chr2 131211347 131211608 -122044975 - L1MC2 LINE L1 0 7776 6189 558 230 22 48 chr2 131212264 131212499 -122044084 + L1MC5 LINE L1 4475 7834 -127 2082 113 0 0 chr2 131213043 131213327 -122043256 + AluSx SINE Alu 1 284 -28 240 59 0 0 chr2 131213327 131213361 -122043222 + (CAAT)n Simple_repeat Simple_repeat 2 35 0 1806 148 0 0 chr2 131214063 131214346 -122042237 + AluSx SINE Alu 1 283 -29 201 280 0 0 chr2 131214618 131214668 -122041915 + L2 LINE L2 2286 2335 -979 712 240 132 85 chr2 131214803 131215273 -122041310 + L2 LINE L2 2355 2846 -468 2337 78 0 0 chr2 131215893 131216188 -122040395 - AluSx SINE Alu -17 295 1 448 319 95 18 chr2 131216316 131216654 -122039929 + L1MC/D LINE L1 5456 5819 -1989 1948 75 4 0 chr2 131217706 131217971 -122038612 + AluSg SINE Alu 45 310 0 2725 176 55 14 chr2 131422719 131423431 -121833152 - L1PA16 LINE L1 0 6166 5401 210 143 0 0 chr2 131424810 131424845 -121831738 + (CCA)n Simple_repeat Simple_repeat 1 35 0 479 302 35 12 chr2 131424858 131425030 -121831553 - MIR SINE MIR -6 256 81 185 320 70 30 chr2 131425473 131425573 -121831010 - MIR SINE MIR -82 126 23 35 0 0 0 chr2 131425709 131425744 -121830839 + AT_rich Low_complexity Low_complexity 1 35 0 185 65 32 0 chr2 131426842 131426873 -121829710 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1663 116 9 0 chr2 131426883 131427108 -121829475 + AluSq SINE Alu 49 275 -38 183 42 0 0 chr2 131427117 131427141 -121829442 + (GGA)n Simple_repeat Simple_repeat 1 24 0 26745 62 3 1 chr2 131427877 131431468 -121825115 + L1P LINE L1 2 3602 -2544 245 261 0 0 chr2 131431468 131431537 -121825046 + MER94 DNA DNA 66 134 0 440 325 131 29 chr2 131431538 131432008 -121824575 + L2 LINE L2 2708 3232 -81 512 200 7 0 chr2 131432205 131432340 -121824243 + (TA)n Simple_repeat Simple_repeat 2 137 0 223 199 106 159 chr2 131432951 131433102 -121823481 - MIR SINE MIR -45 217 75 200 356 17 0 chr2 131435146 131435205 -121821378 + L3b LINE CR1 1506 1565 -18 1270 224 40 50 chr2 131435206 131435603 -121820980 - MLT2C1 LTR ERVL -4 393 1 1332 248 34 12 chr2 131435749 131436004 -121820579 + L1MD2 LINE L1 5710 5979 -380 2260 92 7 3 chr2 131436004 131436299 -121820284 + AluSx SINE Alu 1 296 -16 1332 248 34 12 chr2 131436299 131436458 -121820125 + L1MD2 LINE L1 5979 6133 -226 246 197 16 0 chr2 131436468 131436529 -121820054 + L1MD3 LINE L1 7926 7987 -8 335 269 35 46 chr2 131437306 131437503 -121819080 + L1MCb LINE L1 169 363 -5682 267 235 0 0 chr2 131437592 131437643 -121818940 + L2 LINE L2 3214 3264 -8 7459 38 2 5 chr2 131438844 131440011 -121816572 - L1PA5 LINE L1 -1 6153 4988 1512 165 61 29 chr2 131440167 131440512 -121816071 + THE1C LTR MaLR 1 356 -19 281 367 0 37 chr2 131440649 131440758 -121815825 - L3 LINE CR1 -92 1485 1381 273 216 0 0 chr2 131441174 131441262 -121815321 + T-rich Low_complexity Low_complexity 1 88 0 263 260 52 0 chr2 131441734 131441811 -121814772 - MIR SINE MIR -80 182 102 2381 95 3 0 chr2 131441985 131442291 -121814292 + AluSc SINE Alu 1 307 -2 221 300 33 67 chr2 131442401 131442521 -121814062 - MIR SINE MIR -92 170 55 208 125 89 0 chr2 131443423 131443479 -121813104 + (TA)n Simple_repeat Simple_repeat 1 61 0 2063 228 82 21 chr2 131443768 131443830 -121812753 - MLT1E1 LTR MaLR -2 641 584 1552 211 38 0 chr2 131443830 131444119 -121812464 + AluJo SINE Alu 2 301 -11 2063 228 82 21 chr2 131444119 131444668 -121811915 - MLT1E1 LTR MaLR -59 584 1 326 263 124 70 chr2 131444690 131444778 -121811805 - L2 LINE L2 -18 3295 3213 1918 161 38 58 chr2 131444778 131445176 -121811407 + MLT1B LTR MaLR 1 390 0 326 263 124 70 chr2 131445176 131445273 -121811310 - L2 LINE L2 -100 3213 3100 403 207 0 0 chr2 131446020 131446107 -121810476 - L1MB7 LINE L1 -15 6169 6083 294 207 0 0 chr2 131446360 131446418 -121810165 + L2 LINE L2 3256 3313 0 23 68 0 0 chr2 131447305 131447349 -121809234 + AT_rich Low_complexity Low_complexity 1 44 0 2369 173 136 70 chr2 131447364 131448197 -121808386 + L1MC3 LINE L1 6885 7772 -13 279 318 25 38 chr2 131448222 131448458 -121808125 - L1M4 LINE L1 -954 5192 4960 25 0 0 0 chr2 131449272 131449297 -121807286 + AT_rich Low_complexity Low_complexity 1 25 0 601 306 105 25 chr2 131450080 131450443 -121806140 + L2 LINE L2 2921 3312 -1 4318 23 8 0 chr2 131450508 131451073 -121805510 + L1PA3 LINE L1 5603 6171 0 261 139 0 0 chr2 131451237 131451280 -121805303 + (TG)n Simple_repeat Simple_repeat 2 44 0 351 273 36 65 chr2 131452281 131452401 -121804182 + HAL1 LINE L1 1176 1298 -1209 2201 114 3 0 chr2 131452401 131452699 -121803884 + AluSg SINE Alu 1 299 -11 351 273 36 65 chr2 131452699 131452741 -121803842 + HAL1 LINE L1 1298 1340 -1167 893 224 30 104 chr2 131452741 131453107 -121803476 - MER58B DNA MER1_type 0 341 3 351 273 36 65 chr2 131453107 131453221 -121803362 + HAL1 LINE L1 1340 1445 -1062 2024 82 0 11 chr2 131453397 131453678 -121802905 - L1PA8 LINE L1 0 6172 5895 250 219 41 0 chr2 131453731 131453804 -121802779 + L1M4 LINE L1 4631 4706 -1440 2370 185 44 24 chr2 131453843 131454389 -121802194 + MER89 LTR ERV1 1 557 -2 689 179 67 22 chr2 131454924 131455103 -121801480 - MER53 DNA DNA -2 187 1 1498 204 30 13 chr2 131455161 131455460 -121801123 - AluJo SINE Alu -8 304 1 255 304 196 20 chr2 131455766 131456062 -121800521 + L1ME2 LINE L1 239 586 -5619 326 256 98 8 chr2 131456238 131456371 -121800212 + L1ME2 LINE L1 1550 1694 -4702 1564 254 42 4 chr2 131456371 131456919 -121799664 + L1ME2 LINE L1 2480 3048 -3167 1287 227 125 46 chr2 131457018 131457263 -121799320 + L1ME2 LINE L1 5463 5687 -546 6832 71 11 0 chr2 131457263 131458313 -121798270 + L1PA8 LINE L1 5105 6165 -7 1287 227 125 46 chr2 131458313 131458693 -121797890 + L1ME2 LINE L1 5687 6137 -96 676 319 44 16 chr2 131459068 131459316 -121797267 - MIR SINE MIR 0 262 8 583 212 18 47 chr2 131459329 131459499 -121797084 - MER3 DNA MER1_type -7 202 38 387 0 0 0 chr2 131460012 131460055 -121796528 + (TG)n Simple_repeat Simple_repeat 2 44 0 1540 265 40 23 chr2 131460504 131461104 -121795479 + L1MEc LINE L1 572 1181 -5426 300 314 44 27 chr2 131461097 131461379 -121795204 + L1MEc LINE L1 1466 1847 -4629 * 936 26 0 0 chr2 131462003 131462116 -121794467 - L1PA4 LINE L1 -7 6148 6036 269 305 52 35 chr2 131462122 131462303 -121794280 - MIR3 SINE MIR -60 148 11 297 75 0 0 chr2 131462496 131462536 -121794047 + (CA)n Simple_repeat Simple_repeat 2 41 0 307 256 64 48 chr2 131463219 131463344 -121793239 - L2 LINE L2 0 3313 3187 233 272 12 37 chr2 131463784 131463865 -121792718 + C-rich Low_complexity Low_complexity 3 81 0 283 159 6 77 chr2 131463869 131464051 -121792532 + CT-rich Low_complexity Low_complexity 3 171 0 224 344 0 0 chr2 131464248 131464338 -121792245 + CT-rich Low_complexity Low_complexity 2 91 0 493 260 18 18 chr2 131464389 131464558 -121792025 - L1MC4 LINE L1 -186 7856 7688 290 265 20 10 chr2 131464751 131464853 -121791730 - L1MC4a LINE L1 -450 7358 7256 839 244 150 13 chr2 131464878 131465345 -121791238 - L1MC4 LINE L1 -796 7246 6716 1651 122 8 20 chr2 131465587 131465834 -121790749 + AluSg/x SINE Alu 66 309 -3 563 113 19 19 chr2 131466078 131466184 -121790399 - AluYb8 SINE Alu -212 106 1 1359 283 48 14 chr2 131466330 131466889 -121789694 - L1MC4 LINE L1 -1927 5881 5304 214 288 68 0 chr2 131467404 131467463 -121789120 + L2 LINE L2 3246 3308 -5 191 103 26 0 chr2 131468164 131468203 -121788380 + A-rich Low_complexity Low_complexity 5 44 0 188 272 152 22 chr2 131468769 131468854 -121787729 + L2 LINE L2 3165 3261 -11 672 250 83 0 chr2 131468854 131469022 -121787561 + MER5A DNA MER1_type 2 183 -6 1418 159 227 14 chr2 131469623 131469988 -121786595 - MLT1C LTR MaLR -24 443 1 479 282 107 17 chr2 131470399 131470633 -121785950 + MIR SINE MIR 8 262 0 217 321 149 19 chr2 131470840 131471055 -121785528 - MIR SINE MIR 0 262 20 480 289 12 6 chr2 131471707 131471873 -121784710 - MER117 DNA MER1_type -29 168 2 281 261 0 140 chr2 131472136 131472293 -121784290 + MER5B DNA MER1_type 44 178 0 216 0 0 0 chr2 131472751 131472775 -121783808 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 198 348 101 45 chr2 131473880 131474127 -121782456 - L2 LINE L2 -86 3186 2926 589 315 61 29 chr2 131475502 131475877 -121780706 + MLT1J2 LTR MaLR 42 428 -22 493 295 130 32 chr2 131475885 131476285 -121780298 + LTR33 LTR ERVL 1 439 -82 186 214 36 18 chr2 131476506 131476562 -121780021 - MIR SINE MIR -62 146 90 241 293 71 10 chr2 131477322 131477421 -121779162 + L2 LINE L2 3155 3259 -13 198 0 0 0 chr2 131477930 131477952 -121778631 + (TG)n Simple_repeat Simple_repeat 1 22 0 435 19 0 0 chr2 131478211 131478263 -121778320 + (GA)n Simple_repeat Simple_repeat 2 53 0 217 349 61 8 chr2 131478309 131478441 -121778142 - MIR3 SINE MIR -13 195 57 994 259 98 5 chr2 131478444 131478854 -121777729 - L1M4 LINE L1 -1538 4608 4161 214 255 0 0 chr2 131479217 131479264 -121777319 + CT-rich Low_complexity Low_complexity 1 47 0 740 308 80 11 chr2 131479597 131479970 -121776613 - LTR33A LTR ERVL 0 523 125 444 278 36 29 chr2 131480465 131480742 -121775841 + L1M4 LINE L1 4741 5019 -1127 21 0 0 0 chr2 131480818 131480839 -121775744 + AT_rich Low_complexity Low_complexity 1 21 0 403 282 54 32 chr2 131480937 131481337 -121775246 + L1M2 LINE L1 5265 5681 -490 2840 16 0 0 chr2 131482120 131482433 -121774150 - AluYb8 SINE Alu -5 313 1 323 250 9 107 chr2 131482549 131482661 -121773922 + MIR SINE MIR 97 197 -65 189 0 0 0 chr2 131482949 131482970 -121773613 + (A)n Simple_repeat Simple_repeat 1 21 0 1833 122 0 11 chr2 131483709 131483987 -121772596 - AluSg SINE Alu -1 309 35 195 333 42 0 chr2 131484863 131484935 -121771648 - MIR SINE MIR -91 171 97 253 377 45 26 chr2 131485349 131485503 -121771080 - MIR SINE MIR -36 172 16 319 272 42 23 chr2 131486270 131486409 -121770174 + MIR SINE MIR 11 147 -61 3815 236 34 20 chr2 131486502 131487926 -121768657 - L1MD1 LINE L1 0 6242 4776 2924 143 12 95 chr2 131487926 131488077 -121768506 + LTR26 LTR ERV1 1 163 -440 1919 128 39 23 chr2 131488077 131488382 -121768201 + AluSx SINE Alu 1 310 -2 2924 143 12 95 chr2 131488382 131488885 -121767698 + LTR26 LTR ERV1 163 601 -2 3815 236 34 20 chr2 131488885 131489628 -121766955 - L1MD1 LINE L1 -1466 4776 4045 1666 223 39 24 chr2 131489992 131490450 -121766133 + MLT1C LTR MaLR 1 465 -2 1326 131 83 128 chr2 131491182 131491357 -121765226 - AluJo SINE Alu -9 303 122 546 91 0 0 chr2 131491357 131491434 -121765149 + (TG)n Simple_repeat Simple_repeat 2 78 0 1326 131 83 128 chr2 131491434 131491451 -121765132 - AluJo SINE Alu -190 122 106 1988 109 0 8 chr2 131491451 131491716 -121764867 - AluSx SINE Alu -14 298 36 1326 131 83 128 chr2 131491716 131491834 -121764749 - AluJo SINE Alu -206 106 6 228 329 14 0 chr2 131492118 131492188 -121764395 + MER5A DNA MER1_type 27 97 -92 212 343 14 84 chr2 131492125 131492268 -121764315 - MER5A DNA MER1_type -22 167 35 * 1962 174 90 47 chr2 131492347 131492812 -121763771 - MER31A LTR ERV1 0 485 1 236 333 17 125 chr2 131494355 131494595 -121761988 + L2 LINE L2 2836 3049 -223 301 221 29 0 chr2 131494750 131494818 -121761765 - L2 LINE L2 -563 2751 2682 1184 170 4 20 chr2 131495399 131495646 -121760937 + L1MA5 LINE L1 6058 6300 0 22 0 0 0 chr2 131495802 131495824 -121760759 + AT_rich Low_complexity Low_complexity 1 22 0 273 308 0 13 chr2 131495845 131495923 -121760660 - MIR SINE MIR -121 141 65 595 85 0 11 chr2 131496518 131496612 -121759971 + L1PA13 LINE L1 6071 6163 0 2220 99 13 0 chr2 131496617 131496921 -121759662 + AluSp SINE Alu 1 308 -5 960 26 16 84 chr2 131496925 131497116 -121759467 + (GGAAA)n Simple_repeat Simple_repeat 3 180 0 260 313 0 0 chr2 131497118 131497214 -121759369 + L1MC/D LINE L1 5695 5790 -2018 316 328 18 23 chr2 131497362 131497533 -121759050 + HAL1b LINE L1 1179 1348 0 330 193 0 68 chr2 131497599 131497687 -121758896 + L1MB7 LINE L1 16 97 -6445 21 57 0 0 chr2 131497720 131497755 -121758828 + AT_rich Low_complexity Low_complexity 1 35 0 4762 166 16 16 chr2 131497762 131498741 -121757842 - L1MA8 LINE L1 -30 6261 5283 2679 220 57 93 chr2 131498737 131499785 -121756798 + L1MB7 LINE L1 81 1091 -5451 * 3768 211 50 43 chr2 131499806 131501903 -121754680 + L1MB7 LINE L1 4565 6675 -7 197 289 26 13 chr2 131503218 131503294 -121753289 - MIR SINE MIR -101 107 31 398 378 36 0 chr2 131504065 131504258 -121752325 + MIR SINE MIR 63 262 0 183 414 40 40 chr2 131505443 131505721 -121750862 + L2 LINE L2 2995 3272 0 285 198 198 21 chr2 131506276 131506372 -121750211 + MIR SINE MIR 74 186 -76 219 111 0 44 chr2 131506992 131507037 -121749546 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 206 236 36 18 chr2 131507337 131507392 -121749191 - L2 LINE L2 -24 3248 3193 621 305 60 0 chr2 131507403 131507636 -121748947 + MIR SINE MIR 15 261 -1 926 147 0 11 chr2 131508440 131508617 -121747966 + (GGGA)n Simple_repeat Simple_repeat 3 177 0 203 200 25 0 chr2 131508618 131508658 -121747925 + GA-rich Low_complexity Low_complexity 2 42 0 355 128 23 0 chr2 131508940 131509026 -121747557 + (TA)n Simple_repeat Simple_repeat 1 88 0 260 291 114 57 chr2 131509606 131509781 -121746802 - MIR SINE MIR -44 218 34 724 263 24 16 chr2 131511404 131511655 -121744928 - L1ME3 LINE L1 0 6162 5910 288 242 137 0 chr2 131512405 131512529 -121744054 - MLT1H1 LTR MaLR -8 547 407 14311 141 24 2 chr2 131512855 131515220 -121741363 + Tigger1 DNA MER2_type 2 2417 -1 37 39 0 0 chr2 131515921 131515972 -121740611 + AT_rich Low_complexity Low_complexity 1 51 0 243 202 70 35 chr2 131516257 131516371 -121740212 - Charlie7 DNA MER1_type -6 2606 2489 1785 176 70 13 chr2 131516762 131517159 -121739424 + MSTB1 LTR MaLR 2 421 -11 592 223 0 8 chr2 131517241 131517362 -121739221 + FLAM_A SINE Alu 1 120 -13 23 0 0 0 chr2 131517368 131517391 -121739192 + AT_rich Low_complexity Low_complexity 1 23 0 596 248 133 73 chr2 131517973 131518036 -121738547 + L1MCa LINE L1 27 85 -5960 2041 72 49 0 chr2 131518036 131518300 -121738283 + AluSg SINE Alu 27 303 -7 596 248 133 73 chr2 131518300 131518522 -121738061 + L1MCa LINE L1 85 258 -5787 1609 284 59 20 chr2 131518554 131519146 -121737437 - MER21B LTR ERV1 -52 811 197 246 94 0 0 chr2 131519263 131519295 -121737288 - MER21B LTR ERV1 -777 86 55 979 274 20 49 chr2 131519376 131519784 -121736799 + L1MCa LINE L1 256 651 -5394 1686 270 35 14 chr2 131519784 131520129 -121736454 - LTR53 LTR ERVL 0 519 158 2302 169 30 2 chr2 131520129 131520526 -121736057 - LTR57 LTR ERVL 0 411 4 1686 270 35 14 chr2 131520526 131520688 -121735895 - LTR53 LTR ERVL -361 158 1 1938 246 54 31 chr2 131520690 131521774 -121734809 + L1MCa LINE L1 649 1764 -4800 * 3470 153 23 65 chr2 131521771 131522541 -121734042 + L1MCa LINE L1 418 1155 -5409 2732 250 58 43 chr2 131522529 131523863 -121732720 + L1MCa LINE L1 2484 3838 -2726 * 2558 256 60 21 chr2 131523886 131524795 -121731788 + L1MCa LINE L1 3924 4868 -1696 5420 230 32 55 chr2 131524874 131525586 -121730997 + L1MC3 LINE L1 3650 4377 -1769 2279 121 0 0 chr2 131525586 131525891 -121730692 + AluSg SINE Alu 1 305 -5 5420 230 32 55 chr2 131525891 131526025 -121730558 + L1MC3 LINE L1 4377 4513 -1633 4578 46 4 0 chr2 131526025 131526585 -121729998 - L1PA7 LINE L1 -6 6148 5587 1854 113 30 8 chr2 131526585 131526850 -121729733 - AluSx SINE Alu -41 271 1 5420 230 32 55 chr2 131526850 131529228 -121727355 + L1MC3 LINE L1 4511 5400 -746 1093 204 201 30 chr2 131529255 131529593 -121726990 - MSTD LTR MaLR 0 396 1 2621 166 140 132 chr2 131529593 131529858 -121726725 + L1MC3 LINE L1 6794 7055 -730 326 261 11 11 chr2 131529858 131529946 -121726637 + MLT1F1 LTR MaLR 24 111 -456 2621 166 140 132 chr2 131529946 131530569 -121726014 + L1MC3 LINE L1 7055 7777 -8 339 213 16 25 chr2 131530580 131530702 -121725881 + GA-rich Low_complexity Low_complexity 2 122 0 1882 182 81 20 chr2 131531312 131531718 -121724865 - MSTB1 LTR MaLR -1 431 1 195 129 0 0 chr2 131531843 131531874 -121724709 + (CAT)n Simple_repeat Simple_repeat 3 33 0 220 231 19 0 chr2 131532195 131532247 -121724336 - MIR SINE MIR -113 149 97 287 317 16 0 chr2 131532265 131532388 -121724195 + (TA)n Simple_repeat Simple_repeat 2 126 0 2117 169 50 10 chr2 131532420 131532817 -121723766 + HSMAR2 DNA Mariner 10 422 -880 2278 148 65 30 chr2 131532817 131533322 -121723261 - MLT2A2 LTR ERVL 0 554 3 5052 134 55 6 chr2 131533326 131534166 -121722417 + HSMAR2 DNA Mariner 420 1300 -2 496 269 123 26 chr2 131535633 131535860 -121720723 + MIR SINE MIR 2 250 -12 21 0 0 0 chr2 131537110 131537131 -121719452 + AT_rich Low_complexity Low_complexity 1 21 0 550 287 73 47 chr2 131537144 131537881 -121718702 - L1ME3A LINE L1 -246 5993 5238 2340 91 0 3 chr2 131537885 131538181 -121718402 - AluSg SINE Alu -9 301 7 207 0 0 0 chr2 131538185 131538208 -121718375 + (T)n Simple_repeat Simple_repeat 1 23 0 2702 197 29 39 chr2 131538287 131538937 -121717646 - L1MB2 LINE L1 -2 6169 5526 1031 241 48 40 chr2 131538937 131539335 -121717248 - MLT1C LTR MaLR -66 401 1 290 302 161 26 chr2 131539363 131539711 -121716872 - L1ME3A LINE L1 -1804 4411 4017 233 265 27 68 chr2 131539737 131539884 -121716699 - L1ME3A LINE L1 -2154 4061 3921 3266 127 84 100 chr2 131539902 131540700 -121715883 - LTR1 LTR ERV1 0 785 1 2333 56 0 0 chr2 131540757 131541069 -121715514 + AluY SINE Alu 1 312 0 429 235 89 53 chr2 131541163 131541410 -121715173 - L1ME3A LINE L1 -3142 3073 2818 237 159 0 0 chr2 131541535 131541579 -121715004 + T-rich Low_complexity Low_complexity 1 44 0 343 337 92 71 chr2 131541800 131542741 -121713842 - L1ME3A LINE L1 -3949 2447 1487 246 174 0 0 chr2 131543444 131543490 -121713093 + (CA)n Simple_repeat Simple_repeat 2 47 0 183 129 0 0 chr2 131544142 131544173 -121712410 + (TC)n Simple_repeat Simple_repeat 2 32 0 290 290 21 0 chr2 131544878 131544971 -121711612 + MER5A DNA MER1_type 3 97 -92 329 327 74 19 chr2 131545895 131546057 -121710526 + L2 LINE L2 3143 3313 0 2054 129 0 23 chr2 131546135 131546438 -121710145 - AluSx SINE Alu -14 298 3 2216 77 31 0 chr2 131547396 131547682 -121708901 - AluY SINE Alu -16 295 1 280 271 0 0 chr2 131547928 131547998 -121708585 + L2 LINE L2 3240 3309 -4 210 269 0 0 chr2 131548824 131548876 -121707707 + CT-rich Low_complexity Low_complexity 1 52 0 234 299 66 7 chr2 131548997 131549134 -121707449 + MIR SINE MIR 118 262 0 318 87 0 0 chr2 131549333 131549379 -121707204 + (TG)n Simple_repeat Simple_repeat 2 47 0 356 323 60 51 chr2 131549462 131549778 -121706805 - MLT1G LTR MaLR -199 391 73 2099 206 70 104 chr2 131549786 131550505 -121706078 - LTR8A LTR ERV1 0 727 34 362 316 113 8 chr2 131550581 131550714 -121705869 - MIR SINE MIR -110 152 6 470 287 6 43 chr2 131550736 131550900 -121705683 + MIR3 SINE MIR 36 193 -15 766 290 169 8 chr2 131551006 131551372 -121705211 + LTR16A LTR ERVL 18 442 -8 475 271 41 29 chr2 131551962 131552132 -121704451 + MER5B DNA MER1_type 1 172 -6 363 299 50 118 chr2 131552262 131552583 -121704000 - L2 LINE L2 -12 3260 2962 2312 110 0 0 chr2 131552595 131552903 -121703680 - AluSg SINE Alu -2 308 1 378 310 97 7 chr2 131553232 131553387 -121703196 - MIR SINE MIR -51 211 43 236 373 85 0 chr2 131553734 131553852 -121702731 - MIR SINE MIR -82 180 53 239 274 0 0 chr2 131554717 131554790 -121701793 + L1MCc LINE L1 1396 1468 -4955 1140 279 59 48 chr2 131554870 131555414 -121701169 + L1MEc LINE L1 205 754 -5809 2372 211 25 12 chr2 131555447 131555936 -121700647 - MER70B LTR ERVL -82 496 2 260 269 15 0 chr2 131555937 131556004 -121700579 + L1MEc LINE L1 749 816 -5747 * 666 238 77 14 chr2 131555981 131556221 -121700362 + L1ME2 LINE L1 5948 6144 -256 238 387 54 24 chr2 131557265 131557433 -121699150 - MIR3 SINE MIR -4 204 32 1583 98 128 19 chr2 131558012 131558278 -121698305 - AluSg SINE Alu -15 295 1 200 307 0 67 chr2 131558680 131558755 -121697828 - L2 LINE L2 -60 3212 3143 557 182 0 0 chr2 131559406 131559505 -121697078 - MER5A DNA MER1_type -87 102 4 268 247 240 20 chr2 131561858 131562004 -121694579 - MIR SINE MIR -6 256 79 761 182 31 6 chr2 131562086 131562245 -121694338 + MER3 DNA MER1_type 1 163 -46 1497 194 4 4 chr2 131562251 131562514 -121694069 - AluJo SINE Alu -45 267 5 4732 265 85 23 chr2 131562744 131565538 -121691045 + L1MEc LINE L1 1375 4468 -1914 1354 192 19 108 chr2 131565538 131565966 -121690617 - MLT1B LTR MaLR 0 390 1 4732 265 85 23 chr2 131565966 131566093 -121690490 + L1MEc LINE L1 4468 4586 -1796 * 12284 209 48 15 chr2 131566091 131572319 -121684264 + L1PA16 LINE L1 102 6216 -653 2136 145 0 0 chr2 131572319 131572616 -121683967 + AluSq SINE Alu 1 297 -16 12284 209 48 15 chr2 131572616 131573290 -121683293 + L1PA16 LINE L1 6216 6866 -3 3801 193 28 29 chr2 131573319 131574090 -121682493 + L1MB8 LINE L1 4678 5448 -966 2392 93 0 3 chr2 131574090 131574403 -121682180 + AluSx SINE Alu 1 312 0 3801 193 28 29 chr2 131574403 131575369 -121681214 + L1MB8 LINE L1 5448 6409 -5 299 326 23 8 chr2 131575654 131575783 -121680800 + MIR SINE MIR 129 259 -3 2103 126 0 3 chr2 131576311 131576605 -121679978 - AluSx SINE Alu -19 293 1 230 341 119 32 chr2 131576912 131577038 -121679545 + L2 LINE L2 3125 3261 -11 208 333 14 0 chr2 131577364 131577433 -121679150 + L2 LINE L2 3239 3308 -5 1510 253 56 10 chr2 131577470 131578045 -121678538 + MLT2F LTR ERVL 17 663 0 6029 154 42 4 chr2 131579170 131580346 -121676237 - Tigger3b DNA MER2_type -10 1221 1 1860 151 3 52 chr2 131580366 131580691 -121675892 + AluJb SINE Alu 2 310 -2 247 267 238 20 chr2 131580746 131580847 -121675736 - MER5B DNA MER1_type 0 178 56 1602 249 106 84 chr2 131580852 131582039 -121674544 + L1ME2 LINE L1 2545 3704 -2442 252 196 0 0 chr2 131582039 131582085 -121674498 + Tigger5 DNA MER2_type 2278 2323 0 1602 249 106 84 chr2 131582085 131582202 -121674381 + L1ME2 LINE L1 3704 3817 -2329 2585 195 30 7 chr2 131582202 131582766 -121673817 + L1MB1 LINE L1 5590 6166 -2 1602 249 106 84 chr2 131582766 131583232 -121673351 + L1ME2 LINE L1 3817 4401 -1745 3404 176 17 23 chr2 131583243 131583944 -121672639 + L1MB3 LINE L1 5445 6141 -42 2641 175 23 2 chr2 131583943 131584514 -121672069 - L1 LINE L1 -1359 4787 4205 * 3640 133 12 57 chr2 131584515 131585194 -121671389 + L1PB4 LINE L1 5508 6155 -1 449 280 69 26 chr2 131585230 131585419 -121671164 + L1ME2 LINE L1 4382 4578 -1568 433 250 17 42 chr2 131585422 131585542 -121671041 + MER58 DNA MER1_type 2 118 -2302 2234 243 42 67 chr2 131585687 131585810 -121670773 + L1ME2 LINE L1 4614 4739 -1425 2233 76 7 14 chr2 131585810 131586099 -121670484 + AluSg SINE Alu 1 287 -23 2234 243 42 67 chr2 131586099 131587537 -121669046 + L1ME2 LINE L1 4739 6133 -31 228 363 13 38 chr2 131588113 131588270 -121668313 - L2 LINE L2 0 3313 3161 499 245 20 0 chr2 131589388 131589490 -121667093 + MER5B DNA MER1_type 75 178 0 1537 204 102 48 chr2 131589559 131590040 -121666543 + MLT2B1 LTR ERVL 1 414 0 222 333 108 0 chr2 131590045 131590147 -121666436 - MER5B DNA MER1_type -58 120 8 218 294 96 66 chr2 131590157 131590293 -121666290 + MIR SINE MIR 79 218 -44 801 214 13 65 chr2 131590391 131590620 -121665963 - AluJb SINE Alu -13 299 83 259 310 62 39 chr2 131591776 131591905 -121664678 + MIR SINE MIR 99 230 -32 254 347 40 40 chr2 131591967 131592117 -121664466 - L3 LINE CR1 -23 1554 1405 615 253 72 0 chr2 131592224 131592390 -121664193 + MIR SINE MIR 3 180 -82 218 220 0 176 chr2 131592605 131592696 -121663887 - MIR SINE MIR -57 151 77 207 139 0 0 chr2 131593301 131593337 -121663246 + (TTA)n Simple_repeat Simple_repeat 1 36 0 26 30 0 0 chr2 131593489 131593522 -121663061 + AT_rich Low_complexity Low_complexity 1 33 0 1174 170 71 50 chr2 131593888 131594171 -121662412 + L1MB5 LINE L1 5879 6167 -7 220 275 50 0 chr2 131594263 131594343 -121662240 + MIR SINE MIR 40 123 -139 444 305 103 17 chr2 131594917 131595091 -121661492 - MIR SINE MIR -17 245 57 440 306 61 68 chr2 131595551 131595976 -121660607 - MLT1L LTR MaLR 0 615 194 270 361 113 0 chr2 131598385 131598518 -121658065 + MER5A DNA MER1_type 2 149 -40 1688 189 124 14 chr2 131598523 131598958 -121657625 - MLT1D LTR MaLR 0 505 23 358 278 78 50 chr2 131599611 131599993 -121656590 - L1MCa LINE L1 -4849 1577 1185 226 270 16 0 chr2 131599994 131600057 -121656526 + MER5B DNA MER1_type 115 178 0 1123 240 46 25 chr2 131601232 131601598 -121654985 - MER87 LTR ERV1 0 541 168 1915 229 25 6 chr2 131602732 131603256 -121653327 + L1M4 LINE L1 4738 5271 -875 726 99 9 0 chr2 131603291 131603402 -121653181 - L1PA15 LINE L1 0 6165 6054 2379 150 174 37 chr2 131603425 131603965 -121652618 - LTR18B LTR ERVL 0 614 1 6560 158 32 3 chr2 131604119 131605254 -121651329 - HERVL18 LTR ERVL 0 6047 4880 2358 154 0 34 chr2 131605247 131605657 -121650926 - HERVL18 LTR ERVL -4834 1213 818 * 1604 207 3 6 chr2 131605637 131605951 -121650632 + HERVL18 LTR ERVL 5735 6047 0 * 1778 179 30 37 chr2 131606105 131606648 -121649935 + LTR18B LTR ERVL 1 587 -27 11943 171 20 8 chr2 131606675 131606950 -121649633 - L1PA15 LINE L1 -106 6059 5789 2275 111 0 7 chr2 131606950 131607257 -121649326 - AluSc SINE Alu -4 305 1 11943 171 20 8 chr2 131607257 131610217 -121646366 - L1PA15 LINE L1 -376 5789 2788 1267 202 161 73 chr2 131610222 131610781 -121645802 - LTR24C LTR ERV1 -27 608 1 34 55 0 0 chr2 131610822 131610877 -121645706 + AT_rich Low_complexity Low_complexity 1 55 0 235 197 121 0 chr2 131610978 131611044 -121645539 + LTR24 LTR ERV1 369 424 -43 829 215 86 36 chr2 131611707 131611986 -121644597 - LTR19C LTR ERV1 -1 778 486 * 1403 198 14 81 chr2 131611964 131612383 -121644200 - LTR9 LTR ERV1 -221 391 1 244 236 22 22 chr2 131614154 131614243 -121642340 + L1MA10 LINE L1 6243 6331 -3 236 213 31 47 chr2 131614247 131614374 -121642209 + (TTTAA)n Simple_repeat Simple_repeat 3 127 0 2483 92 119 5 chr2 131614374 131614776 -121641807 - LTR7 LTR ERV1 -2 448 1 2841 197 39 44 chr2 131614794 131615056 -121641527 - MER63C DNA MER1_type -270 790 528 523 227 222 0 chr2 131615056 131615232 -121641351 + MER58C DNA MER1_type 1 215 0 873 257 22 14 chr2 131615240 131615462 -121641121 + MER58A DNA MER1_type 1 224 0 2841 197 39 44 chr2 131615462 131615981 -121640602 - MER63C DNA MER1_type -539 521 4 1779 197 52 83 chr2 131616307 131616435 -121640148 - L1MD2 LINE L1 -486 6267 6137 279 0 0 0 chr2 131616435 131616466 -121640117 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1779 197 52 83 chr2 131616466 131617245 -121639338 - L1MD2 LINE L1 -616 6137 5375 1146 237 80 44 chr2 131617270 131617798 -121638785 - L1MD2 LINE L1 -2402 4138 3592 * 2610 237 57 33 chr2 131617796 131618746 -121637837 - L1MD2 LINE L1 -4135 2405 1427 1367 137 31 13 chr2 131618746 131618972 -121637611 + MER30 DNA MER1_type 1 230 0 2610 237 57 33 chr2 131618972 131619053 -121637530 - L1MD2 LINE L1 -5113 1427 1349 1571 165 201 11 chr2 131619160 131619518 -121637065 + MSTA LTR MaLR 3 428 0 6993 148 7 40 chr2 131619520 131620803 -121635780 + THE1C-int LTR MaLR 3 1243 -337 1581 144 161 71 chr2 131620808 131621175 -121635408 - MER4A LTR ERV1 -4 660 261 548 143 10 10 chr2 131621175 131621273 -121635310 - MER4A LTR ERV1 -566 98 1 1939 97 38 38 chr2 131621273 131621613 -121634970 + THE1C-int LTR MaLR 1241 1580 0 1800 142 59 59 chr2 131621614 131621988 -121634595 + THE1C LTR MaLR 2 375 0 784 188 149 16 chr2 131622017 131622272 -121634311 - L1MD2 LINE L1 -5258 1285 997 644 240 26 101 chr2 131622734 131623001 -121633582 - L1MD2 LINE L1 -6155 385 139 815 273 50 12 chr2 131624089 131624331 -121632252 + MLT1G1 LTR MaLR 1 251 -344 217 229 0 21 chr2 131624558 131624606 -121631977 - L2 LINE L2 -9 3263 3217 302 289 40 85 chr2 131624756 131624957 -121631626 + MIR SINE MIR 23 214 -48 764 182 118 11 chr2 131625330 131625517 -121631066 + MER3 DNA MER1_type 2 208 -1 513 252 124 19 chr2 131625520 131625730 -121630853 + MIR SINE MIR 31 262 0 1348 221 54 49 chr2 131625839 131626391 -121630192 + L1MC3 LINE L1 1072 1626 -4800 * 3708 153 23 65 chr2 131626388 131627158 -121629425 + L1MCa LINE L1 280 1017 -5409 2754 249 58 42 chr2 131627146 131628479 -121628104 + L1MCa LINE L1 2346 3700 -2726 * 2524 259 60 21 chr2 131628502 131629411 -121627172 + L1MCa LINE L1 3786 4730 -1696 5404 231 32 55 chr2 131629490 131630202 -121626381 + L1MC3 LINE L1 3930 4657 -1769 2256 125 0 0 chr2 131630202 131630507 -121626076 + AluSg SINE Alu 1 305 -5 5404 231 32 55 chr2 131630507 131630641 -121625942 + L1MC3 LINE L1 4657 4793 -1633 4578 46 4 0 chr2 131630641 131631201 -121625382 - L1PA7 LINE L1 -6 6148 5587 1854 113 30 8 chr2 131631201 131631466 -121625117 - AluSx SINE Alu -41 271 1 5404 231 32 55 chr2 131631466 131633844 -121622739 + L1MC3 LINE L1 4791 5680 -746 1093 204 201 30 chr2 131633871 131634209 -121622374 - MSTD LTR MaLR 0 396 1 2636 165 140 132 chr2 131634209 131634474 -121622109 + L1MC3 LINE L1 7074 7335 -730 326 261 11 11 chr2 131634474 131634562 -121622021 + MLT1F1 LTR MaLR 24 111 -456 2636 165 140 132 chr2 131634562 131635185 -121621398 + L1MC3 LINE L1 7335 8057 -8 333 209 9 26 chr2 131635196 131635311 -121621272 + GA-rich Low_complexity Low_complexity 2 114 0 1882 182 81 20 chr2 131635921 131636327 -121620256 - MSTB1 LTR MaLR -1 431 1 195 129 0 0 chr2 131636452 131636483 -121620100 + (CAT)n Simple_repeat Simple_repeat 3 33 0 220 231 19 0 chr2 131636804 131636856 -121619727 - MIR SINE MIR -113 149 97 287 317 16 0 chr2 131636874 131636997 -121619586 + (TA)n Simple_repeat Simple_repeat 1 125 0 2117 169 50 10 chr2 131637029 131637426 -121619157 + HSMAR2 DNA Mariner 10 422 -880 2278 148 65 30 chr2 131637426 131637931 -121618652 - MLT2A2 LTR ERVL 0 554 3 5052 134 55 6 chr2 131637935 131638775 -121617808 + HSMAR2 DNA Mariner 420 1300 -2 496 269 123 26 chr2 131640242 131640469 -121616114 + MIR SINE MIR 2 250 -12 21 0 0 0 chr2 131641718 131641739 -121614844 + AT_rich Low_complexity Low_complexity 1 21 0 555 284 73 47 chr2 131641752 131642489 -121614094 - L1ME3A LINE L1 -246 5924 5169 2323 92 0 3 chr2 131642493 131642787 -121613796 - AluSg SINE Alu -11 299 7 198 0 0 0 chr2 131642791 131642813 -121613770 + (T)n Simple_repeat Simple_repeat 1 22 0 2702 197 29 39 chr2 131642892 131643542 -121613041 - L1MB2 LINE L1 -2 6169 5526 1028 241 48 40 chr2 131643542 131643940 -121612643 - MLT1C LTR MaLR -66 401 1 290 302 161 26 chr2 131643968 131644316 -121612267 - L1ME3A LINE L1 -1804 4342 3948 233 265 27 68 chr2 131644342 131644489 -121612094 - L1ME3A LINE L1 -2154 3992 3852 3278 124 85 100 chr2 131644507 131645304 -121611279 - LTR1 LTR ERV1 0 785 1 2333 56 0 0 chr2 131645361 131645673 -121610910 + AluY SINE Alu 1 312 0 428 232 102 51 chr2 131645762 131646016 -121610567 - L1ME3A LINE L1 -3131 3015 2749 237 159 0 0 chr2 131646141 131646185 -121610398 + T-rich Low_complexity Low_complexity 1 44 0 25 75 0 0 chr2 131646779 131646832 -121609751 + AT_rich Low_complexity Low_complexity 1 53 0 200 257 0 27 chr2 131646853 131646927 -121609656 + T-rich Low_complexity Low_complexity 3 74 0 27 45 0 45 chr2 131646994 131647061 -121609522 + AT_rich Low_complexity Low_complexity 1 64 0 246 174 0 0 chr2 131648050 131648096 -121608487 + (CA)n Simple_repeat Simple_repeat 2 47 0 183 129 0 0 chr2 131648748 131648779 -121607804 + (TC)n Simple_repeat Simple_repeat 2 32 0 297 280 21 0 chr2 131649484 131649577 -121607006 + MER5A DNA MER1_type 3 97 -92 329 327 74 19 chr2 131650501 131650663 -121605920 + L2 LINE L2 3143 3313 0 2033 134 0 23 chr2 131650741 131651048 -121605535 - AluSx SINE Alu -10 302 3 2220 74 32 0 chr2 131652006 131652291 -121604292 - AluY SINE Alu -17 294 1 364 283 97 35 chr2 131652846 131652991 -121603592 - L2 LINE L2 -16 3256 3103 227 289 0 0 chr2 131652991 131653036 -121603547 + L1MDb LINE L1 21 65 -6344 482 286 14 4 chr2 131653217 131653387 -121603196 + L1M4 LINE L1 3617 3784 -2362 368 242 20 34 chr2 131653378 131653527 -121603056 + L1M4 LINE L1 3729 3875 -2271 * 3451 252 42 47 chr2 131653518 131655123 -121601460 + L1M4 LINE L1 2258 3854 -2292 2123 245 72 7 chr2 131655257 131656077 -121600506 + L1M4 LINE L1 3133 4005 -2141 190 204 23 0 chr2 131656172 131656216 -121600367 + L2 LINE L2 3010 3054 -218 281 188 0 43 chr2 131656888 131656957 -121599626 - MLT2D LTR ERVL 0 414 357 464 106 41 16 chr2 131656958 131657081 -121599502 + (TAGA)n Simple_repeat Simple_repeat 3 128 0 2117 240 65 4 chr2 131657121 131657596 -121598987 - MLT2B3 LTR ERVL -50 504 1 365 253 61 0 chr2 131657748 131657847 -121598736 - MLT1K LTR MaLR -7 581 477 227 374 59 68 chr2 131658034 131658371 -121598212 - MLT1K LTR MaLR -241 347 14 2358 138 13 47 chr2 131658371 131658819 -121597764 + Tigger2a DNA MER2_type 1 433 -1 369 311 88 30 chr2 131659147 131659475 -121597108 + L2 LINE L2 2279 2625 -689 274 310 11 0 chr2 131659469 131659556 -121597027 - MIR SINE MIR -4 258 171 * 329 337 62 12 chr2 131659667 131659857 -121596726 + MER20B DNA MER1_type 1 202 -17 519 344 53 55 chr2 131660039 131660803 -121595780 - L2 LINE L2 0 3313 2552 816 225 51 0 chr2 131661173 131661351 -121595232 + MER5A DNA MER1_type 3 189 0 340 259 0 0 chr2 131661518 131661599 -121594984 + L2 LINE L2 3229 3309 -4 210 269 0 0 chr2 131662425 131662477 -121594106 + CT-rich Low_complexity Low_complexity 1 52 0 234 299 66 7 chr2 131662598 131662735 -121593848 + MIR SINE MIR 118 262 0 318 87 0 0 chr2 131662934 131662980 -121593603 + (TG)n Simple_repeat Simple_repeat 2 47 0 356 323 60 51 chr2 131663063 131663379 -121593204 - MLT1K LTR MaLR -199 391 73 2087 206 70 104 chr2 131663387 131664106 -121592477 - LTR8A LTR ERV1 0 727 34 362 316 113 8 chr2 131664182 131664315 -121592268 - MIR SINE MIR -110 152 6 470 287 6 43 chr2 131664337 131664501 -121592082 + MIR3 SINE MIR 36 193 -15 754 287 172 11 chr2 131664607 131664973 -121591610 + LTR16A LTR ERVL 18 442 -8 475 271 41 29 chr2 131665563 131665733 -121590850 + MER5B DNA MER1_type 1 172 -6 342 299 50 118 chr2 131665863 131666184 -121590399 - L2 LINE L2 -12 3260 2962 2283 114 0 0 chr2 131666196 131666504 -121590079 - AluSg SINE Alu -2 308 1 378 310 97 7 chr2 131666833 131666988 -121589595 - MIR SINE MIR -51 211 43 236 373 85 0 chr2 131667335 131667453 -121589130 - MIR SINE MIR -82 180 53 239 274 0 0 chr2 131668318 131668391 -121588192 + L1MCc LINE L1 1396 1468 -4955 1304 271 56 53 chr2 131668469 131669019 -121587564 + L1MEc LINE L1 203 754 -5809 2359 213 25 12 chr2 131669052 131669541 -121587042 - MER70B LTR ERVL -82 496 2 245 284 15 0 chr2 131669542 131669609 -121586974 + L1MEc LINE L1 749 816 -5747 * 653 242 77 14 chr2 131669586 131669826 -121586757 + L1ME2 LINE L1 5948 6144 -256 241 381 54 24 chr2 131670870 131671038 -121585545 - MIR3 SINE MIR -4 204 32 1621 91 128 19 chr2 131671614 131671879 -121584704 - AluSg SINE Alu -16 294 1 200 307 0 67 chr2 131672281 131672356 -121584227 - L2 LINE L2 -60 3212 3143 557 182 0 0 chr2 131673007 131673106 -121583477 - MER5A DNA MER1_type -87 102 4 270 240 247 27 chr2 131675458 131675604 -121580979 - MIR SINE MIR -6 256 79 761 182 31 6 chr2 131675686 131675845 -121580738 + MER3 DNA MER1_type 1 163 -46 1456 198 4 4 chr2 131675851 131676114 -121580469 - AluJo SINE Alu -45 267 5 4772 265 85 23 chr2 131676344 131679138 -121577445 + L1MEc LINE L1 1375 4468 -1914 1338 194 19 108 chr2 131679138 131679566 -121577017 - MLT1B LTR MaLR 0 390 1 4772 265 85 23 chr2 131679566 131679693 -121576890 + L1MEc LINE L1 4468 4586 -1796 * 12311 209 48 15 chr2 131679691 131685919 -121570664 + L1PA16 LINE L1 102 6216 -653 2120 146 0 0 chr2 131685919 131686214 -121570369 + AluSq SINE Alu 1 295 -18 12311 209 48 15 chr2 131686214 131686888 -121569695 + L1PA16 LINE L1 6216 6866 -3 4069 193 28 29 chr2 131686917 131687688 -121568895 + L1MB8 LINE L1 4678 5448 -966 2386 93 0 3 chr2 131687688 131688000 -121568583 + AluSx SINE Alu 1 311 -1 4069 193 28 29 chr2 131688000 131688966 -121567617 + L1MB8 LINE L1 5448 6409 -5 303 326 23 8 chr2 131689251 131689380 -121567203 + MIR SINE MIR 129 259 -3 2083 126 0 3 chr2 131689908 131690202 -121566381 - AluSx SINE Alu -19 293 1 226 341 119 32 chr2 131690509 131690635 -121565948 + L2 LINE L2 3125 3261 -11 210 333 14 0 chr2 131690961 131691030 -121565553 + L2 LINE L2 3239 3308 -5 1666 253 56 10 chr2 131691067 131691642 -121564941 + MLT2F LTR ERVL 17 663 0 6394 155 42 4 chr2 131692767 131693943 -121562640 - Tigger3b DNA MER2_type -10 1221 1 1808 154 3 52 chr2 131693963 131694288 -121562295 + AluJb SINE Alu 2 310 -2 268 257 238 20 chr2 131694343 131694444 -121562139 - MER5B DNA MER1_type 0 178 56 2044 250 106 84 chr2 131694449 131695636 -121560947 + L1ME2 LINE L1 2545 3704 -2442 269 196 0 0 chr2 131695636 131695682 -121560901 + Tigger5 DNA MER2_type 2278 2323 0 2044 250 106 84 chr2 131695682 131695799 -121560784 + L1ME2 LINE L1 3704 3817 -2329 2601 199 30 7 chr2 131695799 131696363 -121560220 + L1MB1 LINE L1 5590 6166 -2 2044 250 106 84 chr2 131696363 131696829 -121559754 + L1ME2 LINE L1 3817 4401 -1745 3600 177 17 23 chr2 131696840 131697541 -121559042 + L1MB3 LINE L1 5445 6141 -42 2818 173 23 2 chr2 131697540 131698111 -121558472 - L1 LINE L1 -1359 4787 4205 * 3671 133 12 57 chr2 131698112 131698791 -121557792 + L1PB4 LINE L1 5508 6155 -1 449 280 69 26 chr2 131698827 131699016 -121557567 + L1ME2 LINE L1 4382 4578 -1568 470 250 17 42 chr2 131699019 131699139 -121557444 + MER58 DNA MER1_type 2 118 -223 2485 243 39 71 chr2 131699284 131699407 -121557176 + L1ME2 LINE L1 4614 4739 -1425 2223 76 7 14 chr2 131699407 131699696 -121556887 + AluSg SINE Alu 1 287 -23 2485 243 39 71 chr2 131699696 131701155 -121555428 + L1ME2 LINE L1 4739 6141 -23 232 292 0 56 chr2 131701710 131701782 -121554801 - L2 LINE L2 0 3272 3205 497 245 20 0 chr2 131702985 131703087 -121553496 + MER5B DNA MER1_type 75 178 0 1649 224 93 32 chr2 131703156 131703634 -121552949 + MLT2B1 LTR ERVL 1 414 0 222 333 108 0 chr2 131703639 131703741 -121552842 - MER5B DNA MER1_type -58 120 8 221 294 96 66 chr2 131703751 131703887 -121552696 + MIR SINE MIR 79 218 -44 797 220 13 57 chr2 131703985 131704212 -121552371 - AluJb SINE Alu -13 299 83 240 318 62 39 chr2 131705368 131705497 -121551086 + MIR SINE MIR 99 230 -32 250 347 40 40 chr2 131705559 131705709 -121550874 - L3 LINE CR1 -23 1554 1405 609 253 72 0 chr2 131705816 131705982 -121550601 + MIR SINE MIR 3 180 -82 212 220 0 176 chr2 131706197 131706288 -121550295 - MIR SINE MIR -57 151 77 207 139 0 0 chr2 131706893 131706929 -121549654 + (TTA)n Simple_repeat Simple_repeat 1 36 0 26 30 0 0 chr2 131707081 131707114 -121549469 + AT_rich Low_complexity Low_complexity 1 33 0 1265 167 76 49 chr2 131707480 131707768 -121548815 + L1MB5 LINE L1 5879 6174 0 214 275 50 0 chr2 131707855 131707935 -121548648 + MIR SINE MIR 40 123 -139 482 293 103 17 chr2 131708509 131708683 -121547900 - MIR SINE MIR -17 245 57 502 320 32 36 chr2 131709140 131709418 -121547165 - MLT1L LTR MaLR 0 615 339 14167 184 63 10 chr2 131709630 131715668 -121540915 - L1P5 LINE L1 -509 6358 6 242 365 32 0 chr2 131716012 131716138 -121540445 - MIR SINE MIR -37 225 96 1034 205 85 30 chr2 131716149 131716435 -121540148 - LTR40a LTR ERVL 0 494 203 972 239 58 9 chr2 131717753 131718079 -121538504 + L1MDa LINE L1 2082 2423 -4117 884 283 74 40 chr2 131718059 131718586 -121537997 + L1MDa LINE L1 3592 4136 -2404 * 333 309 67 27 chr2 131718602 131718825 -121537758 + L1M4 LINE L1 4970 5201 -945 4189 223 35 2 chr2 131718925 131719942 -121536641 + L1MDa LINE L1 4357 5407 -1133 4419 104 1 1 chr2 131720043 131720705 -121535878 - L1P LINE L1 -4644 1502 841 1121 196 63 43 chr2 131720704 131721051 -121535532 - L1 LINE L1 -1542 4604 4251 * 715 215 33 152 chr2 131721168 131721441 -121535142 - L1MC5 LINE L1 -882 7079 6896 2710 157 20 20 chr2 131721441 131721945 -121534638 - MER84 LTR ERV1 -3 504 1 715 215 33 152 chr2 131721945 131722191 -121534392 - L1MC5 LINE L1 -1065 6896 6622 2836 184 61 38 chr2 131722349 131723000 -121533583 - LTR28 LTR ERV1 -354 666 1 1925 141 3 3 chr2 131724768 131725066 -121531517 + AluSx SINE Alu 3 300 -12 24 0 0 0 chr2 131725472 131725496 -121531087 + AT_rich Low_complexity Low_complexity 1 24 0 2347 144 0 10 chr2 131725542 131725931 -121530652 - L1PB3 LINE L1 -1 6153 5769 2370 149 27 2 chr2 131725931 131726334 -121530249 - L1PA15 LINE L1 0 6165 5746 1438 231 3 3 chr2 131727849 131728160 -121528423 - HERVL18 LTR ERVL 0 6047 5737 * 2333 156 0 34 chr2 131728143 131728553 -121528030 + HERVL18 LTR ERVL 818 1213 -4834 * 2459 145 46 9 chr2 131728546 131729001 -121527582 + HERVL18 LTR ERVL 4880 5351 -696 7333 43 0 0 chr2 131729103 131730430 -121526153 + L1PA3 LINE L1 4819 6144 -11 2451 214 90 16 chr2 131730442 131731200 -121525383 + L1MB5 LINE L1 4600 5413 -744 1565 138 35 67 chr2 131731314 131731655 -121524928 - MER4E LTR ERV1 -87 692 363 2212 94 0 22 chr2 131731695 131732013 -121524570 + AluY SINE Alu 1 311 0 2211 126 0 0 chr2 131732014 131732372 -121524211 - L1PA8A LINE L1 -28 6103 5746 940 156 0 22 chr2 131732472 131732651 -121523932 + L1MB5 LINE L1 5383 5557 -734 634 251 158 57 chr2 131733247 131733670 -121522913 - MLT1H LTR MaLR 0 549 84 233 261 31 0 chr2 131734514 131734579 -121522004 - MLT1L LTR MaLR -359 256 190 757 167 135 0 chr2 131734582 131734738 -121521845 - MER20 DNA MER1_type -7 212 36 358 271 12 0 chr2 131734849 131734934 -121521649 - MER5A DNA MER1_type -2 187 102 209 209 0 176 chr2 131735886 131735977 -121520606 - MIR SINE MIR -57 151 77 207 139 0 0 chr2 131736582 131736618 -121519965 + (TTA)n Simple_repeat Simple_repeat 1 36 0 26 30 0 0 chr2 131736770 131736803 -121519780 + AT_rich Low_complexity Low_complexity 1 33 0 941 198 71 50 chr2 131737169 131737452 -121519131 + L1MB5 LINE L1 5879 6167 -7 188 338 14 0 chr2 131737554 131737625 -121518958 + MIR SINE MIR 52 123 -139 511 262 158 57 chr2 131738052 131738475 -121518108 + MLT1H LTR MaLR 84 549 0 2397 175 77 15 chr2 131739070 131739848 -121516735 - L1M2 LINE L1 -734 5557 4729 501 338 30 0 chr2 131740562 131740760 -121515823 + LTR16A LTR ERVL 240 443 -7 22 35 0 0 chr2 131741867 131741896 -121514687 + AT_rich Low_complexity Low_complexity 1 29 0 412 258 17 42 chr2 131741909 131742029 -121514554 + MER58 DNA MER1_type 2 118 -223 866 239 43 103 chr2 131742174 131742297 -121514286 + L1M4 LINE L1 4614 4743 -1403 2034 98 7 14 chr2 131742297 131742584 -121513999 + AluSg SINE Alu 1 285 -25 866 239 43 103 chr2 131742584 131743141 -121513442 + L1M4 LINE L1 4743 5253 -893 365 334 76 15 chr2 131743301 131744053 -121512530 - L1MEc LINE L1 -4579 1817 1020 2108 136 3 0 chr2 131744187 131744202 -121512381 - AluSx SINE Alu -10 302 289 207 0 0 0 chr2 131744202 131744225 -121512358 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 2108 136 3 0 chr2 131744225 131744510 -121512073 - AluSx SINE Alu -23 289 1 1848 243 62 11 chr2 131745441 131745911 -121510672 - MER74A LTR ERVL -60 498 5 217 325 97 67 chr2 131745972 131746403 -121510180 + L2 LINE L2 2826 3269 -3 4270 77 27 3 chr2 131746971 131747975 -121508608 - MER11A LTR ERVK -7 1259 1 1506 117 0 0 chr2 131747975 131748180 -121508403 + AluSg/x SINE Alu 88 292 -18 1254 243 53 41 chr2 131748180 131748617 -121507966 - LTR9 LTR ERV1 -91 521 80 1221 265 39 42 chr2 131749070 131749613 -121506970 - L1MC4 LINE L1 -11 8031 7491 4618 119 21 3 chr2 131749614 131750326 -121506257 - Tigger1 DNA MER2_type 0 2418 1694 1464 141 8 0 chr2 131750319 131750567 -121506016 - Tigger1 DNA MER2_type -2168 250 1 * 415 226 124 21 chr2 131750640 131750826 -121505757 - L1MC4a LINE L1 -483 7325 7121 559 289 51 28 chr2 131750954 131751207 -121505376 - L1ME1 LINE L1 -6 6160 5902 9660 152 16 53 chr2 131751207 131753265 -121503318 - Tigger1 DNA MER2_type 0 2418 437 356 151 14 14 chr2 131753365 131753438 -121503145 + AluSg/x SINE Alu 198 270 -32 204 380 9 37 chr2 131753745 131753853 -121502730 - L2 LINE L2 -3 3269 3165 227 333 0 14 chr2 131755132 131755204 -121501379 + MLT1K LTR MaLR 18 88 -500 543 282 58 15 chr2 131755265 131755471 -121501112 + MLT1K LTR MaLR 188 402 -186 393 178 30 20 chr2 131755626 131755727 -121500856 + L1PA15 LINE L1 6056 6157 -8 397 139 70 23 chr2 131755948 131756120 -121500463 + (TA)n Simple_repeat Simple_repeat 1 180 0 222 128 64 0 chr2 131756170 131756264 -121500319 + (TA)n Simple_repeat Simple_repeat 1 100 0 1498 210 51 43 chr2 131756903 131757274 -121499309 + MLT1A2 LTR MaLR 1 374 0 368 218 122 64 chr2 131757276 131757588 -121498995 + L1MEc LINE L1 1389 1718 -4678 601 86 0 0 chr2 131758200 131758293 -121498290 - L1PA8A LINE L1 -330 5801 5709 2457 126 109 9 chr2 131758293 131758723 -121497860 - MER4D LTR ERV1 -427 476 4 258 267 17 0 chr2 131758928 131759009 -121497574 + GA-rich Low_complexity Low_complexity 1 82 0 372 335 87 42 chr2 131759025 131759312 -121497271 + HAL1b LINE L1 357 656 -692 624 292 91 66 chr2 131759448 131760204 -121496379 + L1M4 LINE L1 14 788 -5754 248 328 0 0 chr2 131760363 131760427 -121496156 + polypurine Low_complexity Low_complexity 5 68 0 1581 240 67 114 chr2 131760897 131761740 -121494843 + L1M4 LINE L1 -212 551 -5729 2196 100 7 13 chr2 131761740 131762040 -121494543 + AluSq SINE Alu 1 298 -15 1581 240 67 114 chr2 131762040 131762484 -121494099 + L1M4 LINE L1 551 1014 -5266 2026 107 0 4 chr2 131764223 131764494 -121492089 - AluSg SINE Alu -8 302 33 396 0 0 0 chr2 131765384 131765428 -121491155 + (TA)n Simple_repeat Simple_repeat 2 45 0 1739 258 58 17 chr2 131765435 131765954 -121490629 - MER74A LTR ERVL -14 544 5 188 299 34 73 chr2 131766007 131766211 -121490372 + L2 LINE L2 2830 3025 -247 219 336 137 8 chr2 131766314 131766445 -121490138 + L2 LINE L2 3122 3269 -3 238 191 0 0 chr2 131767273 131767320 -121489263 + GA-rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr2 131767359 131767380 -121489203 + AT_rich Low_complexity Low_complexity 1 21 0 581 273 44 38 chr2 131768111 131768404 -121488179 - L1MC4 LINE L1 -11 8031 7737 326 319 21 0 chr2 131769289 131769383 -121487200 + MER5A DNA MER1_type 10 105 -84 560 249 43 22 chr2 131770058 131770243 -121486340 - MER5A DNA MER1_type 0 189 1 2146 123 0 3 chr2 131770637 131770945 -121485638 + AluSg SINE Alu 1 307 -3 2084 129 14 3 chr2 131771139 131771434 -121485149 - AluSq SINE Alu -15 298 1 400 183 12 0 chr2 131771445 131771527 -121485056 - LTR9 LTR ERV1 -529 83 1 5803 241 78 78 chr2 131771528 131772351 -121484232 + L1M4 LINE L1 1286 2107 -4307 195 42 0 0 chr2 131772351 131772375 -121484208 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5803 241 78 78 chr2 131772375 131775832 -121480751 + L1M4 LINE L1 2107 5673 -741 606 14 0 0 chr2 131776122 131776193 -121480390 + (TG)n Simple_repeat Simple_repeat 1 71 0 246 81 0 0 chr2 131776193 131776230 -121480353 + (GA)n Simple_repeat Simple_repeat 2 38 0 242 290 45 80 chr2 131778288 131778464 -121478119 + MIR3 SINE MIR 32 201 -7 6739 168 18 8 chr2 131779201 131780458 -121476125 - Tigger1 DNA MER2_type -1149 1269 1 8359 207 37 6 chr2 131780460 131782588 -121473995 + L1 LINE L1 3010 5203 -943 4726 156 30 45 chr2 131782702 131784207 -121472376 + L1MA6 LINE L1 4782 6294 -6 1083 236 28 35 chr2 131784226 131784581 -121472002 - L1M4 LINE L1 -3355 2791 2438 2227 110 7 0 chr2 131784581 131784872 -121471711 + AluSp SINE Alu 1 293 -20 1083 236 28 35 chr2 131784872 131784910 -121471673 - L1M4 LINE L1 -3708 2438 2401 946 123 36 55 chr2 131785220 131785439 -121471144 + L1MA9 LINE L1 6081 6295 -17 21 36 0 0 chr2 131785443 131785471 -121471112 + AT_rich Low_complexity Low_complexity 1 28 0 435 323 9 14 chr2 131785574 131785797 -121470786 + HAL1 LINE L1 1501 1722 -785 711 179 135 0 chr2 131786490 131786646 -121469937 - MER20 DNA MER1_type -7 212 36 465 212 12 0 chr2 131786757 131786842 -121469741 - MER5A DNA MER1_type -2 187 102 21 0 0 0 chr2 131788174 131788195 -121468388 + AT_rich Low_complexity Low_complexity 1 21 0 2171 101 0 3 chr2 131788440 131788736 -121467847 - AluSc SINE Alu -14 295 1 680 170 3 5 chr2 131788767 131788918 -121467665 - L1PA8 LINE L1 -10 6162 5996 4216 196 65 12 chr2 131789801 131790792 -121465791 - L1PBa LINE L1 -5815 1048 6 299 346 25 31 chr2 131791136 131791273 -121465310 - MIR SINE MIR -37 225 88 1566 247 61 16 chr2 131791273 131791718 -121464865 - LTR40c LTR ERVL 0 465 1 299 346 25 31 chr2 131791718 131791742 -121464841 - MIR SINE MIR -174 88 65 26 0 0 0 chr2 131791951 131791977 -121464606 + AT_rich Low_complexity Low_complexity 1 26 0 453 200 161 49 chr2 131793124 131793329 -121463254 - MIR SINE MIR -27 235 8 2108 128 0 0 chr2 131793993 131794290 -121462293 - AluSg SINE Alu -13 297 1 1440 170 0 0 chr2 131794290 131794514 -121462069 - AluSx SINE Alu -88 224 1 1038 187 0 5 chr2 131794889 131795176 -121461407 + MER7A DNA MER2_type 2 336 0 2456 198 133 39 chr2 131795492 131796254 -121460329 - LTR28 LTR ERV1 -187 833 1 204 198 57 28 chr2 131796419 131796525 -121460058 + (TA)n Simple_repeat Simple_repeat 1 109 0 408 268 194 48 chr2 131796642 131796993 -121459590 + L1M3d LINE L1 7 408 -6134 473 308 147 33 chr2 131797628 131797808 -121458775 - L1MEc LINE L1 -4132 2264 2106 2248 77 10 10 chr2 131797808 131798120 -121458463 - L1PA8 LINE L1 0 6172 5861 473 308 147 33 chr2 131798120 131798484 -121458099 - L1MEc LINE L1 -4290 2106 1658 505 338 30 0 chr2 131799815 131800013 -121456570 + LTR16A LTR ERVL 240 443 -7 252 205 282 51 chr2 131801136 131801253 -121455330 + L2 LINE L2 3170 3313 0 2023 144 0 26 chr2 131801497 131801809 -121454774 + AluSx SINE Alu 1 304 -8 198 156 0 0 chr2 131802316 131802361 -121454222 + (CA)n Simple_repeat Simple_repeat 2 46 0 30318 33 1 2 chr2 131803670 131807540 -121449043 - L1P LINE L1 -791 5355 1489 188 232 18 18 chr2 131808474 131808530 -121448053 + L2 LINE L2 3258 3313 0 180 404 91 0 chr2 131808641 131808740 -121447843 + MIR SINE MIR 25 132 -76 199 100 0 0 chr2 131808821 131808851 -121447732 + L2 LINE L2 3239 3268 -4 268 276 0 26 chr2 131810365 131810441 -121446142 + (CATATA)n Simple_repeat Simple_repeat 3 76 0 5319 97 1 0 chr2 131810676 131811428 -121445155 + L1PA13 LINE L1 5407 6159 -4 1134 196 6 64 chr2 131811562 131811778 -121444805 - L1MA7 LINE L1 -59 6232 6040 1953 162 7 0 chr2 131811778 131812080 -121444503 - AluSx SINE Alu -8 304 1 1134 196 6 64 chr2 131812080 131812190 -121444393 - L1MA7 LINE L1 -251 6040 5925 * 2715 190 23 6 chr2 131812185 131813182 -121443401 + L1M2 LINE L1 4792 5804 -487 393 331 17 17 chr2 131813544 131813719 -121442864 + L1M3d LINE L1 1350 1524 -5041 * 1999 216 14 62 chr2 131813713 131813819 -121442764 - L1MA9 LINE L1 -164 6148 6038 1710 222 67 5 chr2 131813819 131814023 -121442560 - MSTB LTR MaLR 0 426 236 207 0 0 0 chr2 131814023 131814046 -121442537 + (GA)n Simple_repeat Simple_repeat 2 24 0 1710 222 67 5 chr2 131814046 131814242 -121442341 - MSTB LTR MaLR -190 236 1 1999 216 14 62 chr2 131814242 131814764 -121441819 - L1MA9 LINE L1 -274 6038 5550 1742 244 25 47 chr2 131814881 131815225 -121441358 + L1M4c LINE L1 994 1317 -5067 2388 93 0 0 chr2 131815225 131815516 -121441067 + AluSx SINE Alu 11 301 -11 1742 244 25 47 chr2 131815516 131815876 -121440707 + L1M4c LINE L1 1317 1683 -4701 1868 64 0 38 chr2 131816203 131816469 -121440114 - AluY SINE Alu -15 296 41 243 301 34 48 chr2 131816484 131816630 -121439953 + L1MEd LINE L1 491 634 -5485 185 62 0 31 chr2 131816679 131816711 -121439872 + (TG)n Simple_repeat Simple_repeat 2 32 0 3483 98 4 6 chr2 131816923 131817424 -121439159 + Charlie3 DNA MER1_type 1 500 -2210 3273 86 0 23 chr2 131817419 131817696 -121438887 + Charlie3 DNA MER1_type 2243 2506 -200 * 2845 85 0 3 chr2 131817696 131818061 -121438522 + THE1B LTR MaLR 1 364 0 3273 86 0 23 chr2 131818061 131818258 -121438325 + Charlie3 DNA MER1_type 2506 2706 0 762 270 97 33 chr2 131818297 131818753 -121437830 + L1ME3A LINE L1 5533 6017 -153 2062 128 3 3 chr2 131819703 131820001 -121436582 + AluSx SINE Alu 3 300 -12 21 0 0 0 chr2 131820774 131820795 -121435788 + AT_rich Low_complexity Low_complexity 1 21 0 183 129 0 0 chr2 131821315 131821346 -121435237 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 276 234 148 8 chr2 131821957 131822085 -121434498 - MER69 DNA AcHobo -1 2525 2380 1872 159 26 21 chr2 131822393 131822770 -121433813 - L1MB1 LINE L1 -23 6166 5788 225 157 29 114 chr2 131823359 131823429 -121433154 + MIR SINE MIR 91 154 -108 2230 120 0 7 chr2 131823953 131824261 -121432322 - AluSq SINE Alu -7 306 1 183 306 20 0 chr2 131824390 131824439 -121432144 + MIR SINE MIR 99 148 -60 264 342 35 9 chr2 131825502 131825616 -121430967 + MIR SINE MIR 138 254 -8 435 286 73 73 chr2 131827001 131827193 -121429390 - MIR SINE MIR -5 257 66 998 187 0 0 chr2 131827307 131827478 -121429105 + MER2 DNA MER2_type 40 210 -135 465 208 0 0 chr2 131827506 131827583 -121429000 + MER2 DNA MER2_type 269 345 0 400 105 0 0 chr2 131827605 131827662 -121428921 + MER53 DNA DNA 131 187 -2 2197 210 82 47 chr2 131828876 131828954 -121427629 + MER21B LTR ERV1 15 89 -774 1734 114 4 0 chr2 131828954 131829191 -121427392 - AluSq SINE Alu -11 302 65 2197 210 82 47 chr2 131829191 131829687 -121426896 + MER21B LTR ERV1 89 609 -254 862 96 7 7 chr2 131829698 131829834 -121426749 + (TTCC)n Simple_repeat Simple_repeat 2 137 0 347 279 14 71 chr2 131830741 131830881 -121425702 - MIR SINE MIR -51 211 80 803 328 131 9 chr2 131831811 131832238 -121424345 - MLT1K LTR MaLR -92 496 18 2038 101 4 4 chr2 131832737 131833004 -121423579 - AluSg1 SINE Alu -42 267 1 195 100 0 0 chr2 131833031 131833061 -121423522 + (ATGGTG)n Simple_repeat Simple_repeat 6 35 0 512 190 90 52 chr2 131833233 131833502 -121423081 - L1MEc LINE L1 -1944 4271 3878 * 1531 219 144 7 chr2 131833491 131833902 -121422681 - L1MEc LINE L1 -3425 2790 2324 * 1638 146 94 44 chr2 131833899 131833921 -121422662 + L1 LINE L1 4203 4222 -1924 291 65 0 48 chr2 131833921 131833983 -121422600 + (TA)n Simple_repeat Simple_repeat 2 60 0 1638 146 94 44 chr2 131833983 131834343 -121422240 + L1 LINE L1 4222 4604 -1542 * 5053 63 1 0 chr2 131834342 131834991 -121421592 + L1P LINE L1 841 1490 -4656 759 338 42 60 chr2 131835108 131835390 -121421193 - L1MEc LINE L1 -5134 1262 976 1717 115 57 11 chr2 131835390 131835669 -121420914 + AluSg SINE Alu 1 292 -18 759 338 42 60 chr2 131835669 131835706 -121420877 - L1MEc LINE L1 -5420 976 940 911 76 84 30 chr2 131835706 131835837 -121420746 + MER85 DNA T2_type 1 138 -1 759 338 42 60 chr2 131835837 131836629 -121419954 - L1MEc LINE L1 -5456 940 170 224 321 80 18 chr2 131836777 131836889 -121419694 - L2 LINE L2 -969 2345 2227 182 222 16 79 chr2 131837560 131837623 -121418960 - MIR SINE MIR -129 79 21 714 305 62 7 chr2 131837648 131838018 -121418565 + MLT1J1 LTR MaLR 12 444 -2 1333 46 0 0 chr2 131838068 131838220 -121418363 - L1PA10 LINE L1 -4 6164 6013 1776 114 56 9 chr2 131838220 131838512 -121418071 + L1PA10 LINE L1 5671 5934 -234 1357 88 35 0 chr2 131839819 131839990 -121416593 - AluSc SINE Alu -132 177 1 614 260 84 87 chr2 131839994 131840544 -121416039 - L1MC4a LINE L1 -1286 6522 5975 1547 92 5 42 chr2 131841434 131841651 -121414932 + AluSq SINE Alu 1 209 -104 207 239 36 162 chr2 131843447 131843539 -121413044 - L2 LINE L2 -188 3084 3021 2388 86 7 0 chr2 131843539 131843841 -121412742 - AluSp SINE Alu -5 308 5 207 239 36 162 chr2 131843841 131843915 -121412668 - L2 LINE L2 -251 3021 2939 436 207 23 0 chr2 131844184 131844271 -121412312 + MER103 DNA DNA 57 145 -21 485 174 23 0 chr2 131844485 131844571 -121412012 + MER33 DNA MER1_type 1 88 -236 301 333 99 9 chr2 131844632 131844743 -121411840 + L2 LINE L2 3147 3267 -5 491 172 6 12 chr2 131846025 131846127 -121410456 + MLT1H LTR MaLR 64 154 -395 3304 129 18 18 chr2 131846566 131847070 -121409513 + MER84 LTR ERV1 1 504 -3 1212 195 38 111 chr2 131847113 131847425 -121409158 + L1MC5 LINE L1 6885 7141 -820 3121 127 5 0 chr2 131847425 131847857 -121408726 + MER57B LTR ERV1 1 434 0 1212 195 38 111 chr2 131847857 131848093 -121408490 + L1MC5 LINE L1 7141 7393 -568 499 289 124 48 chr2 131848418 131849433 -121407150 + L1MB8 LINE L1 3918 5009 -1137 1789 177 156 74 chr2 131849742 131850307 -121406276 + LTR36 LTR ERV1 1 611 0 403 336 0 8 chr2 131851120 131851245 -121405338 - L2 LINE L2 0 3313 3190 1783 134 8 0 chr2 131851323 131851585 -121404998 + AluSx SINE Alu 35 298 -14 223 318 37 19 chr2 131851997 131852104 -121404479 - MIR SINE MIR -72 190 82 361 247 41 62 chr2 131902692 131902886 -121353697 + L2 LINE L2 3124 3313 0 986 191 31 82 chr2 131903253 131903547 -121353036 - MLT1G LTR MaLR -8 582 304 355 259 95 20 chr2 131903596 131903743 -121352840 + L1MB8 LINE L1 5485 5642 -479 2141 41 11 8 chr2 131903783 131904051 -121352532 + AluY SINE Alu 23 291 -20 728 77 10 0 chr2 131904195 131904299 -121352284 + (GGAA)n Simple_repeat Simple_repeat 2 106 0 1949 189 19 21 chr2 131904304 131904733 -121351850 - MER6A DNA MER2_type -177 428 1 1163 202 72 27 chr2 131904733 131905064 -121351519 + L1MB8 LINE L1 5828 6173 -5 22 35 0 0 chr2 131905238 131905267 -121351316 + AT_rich Low_complexity Low_complexity 1 29 0 296 236 227 0 chr2 131905692 131905802 -121350781 - MIR SINE MIR -55 153 19 260 338 21 63 chr2 131906779 131906921 -121349662 + L2 LINE L2 3137 3272 0 352 335 26 5 chr2 131908665 131908859 -121347724 - L1MC4a LINE L1 -1924 5884 5687 288 227 168 10 chr2 131908864 131909087 -121347496 - L1MC4a LINE L1 -507 5614 5355 478 291 9 9 chr2 131909573 131909683 -121346900 + L2 LINE L2 3204 3313 0 351 0 0 0 chr2 131909733 131909772 -121346811 + (TG)n Simple_repeat Simple_repeat 2 40 0 252 335 90 6 chr2 131910259 131910426 -121346157 + MIR SINE MIR 35 215 -47 693 288 51 39 chr2 131911897 131912384 -121344199 + HAL1 LINE L1 1257 1749 -758 210 277 36 12 chr2 131912970 131913053 -121343530 - MER5B DNA MER1_type -76 102 18 1116 217 105 19 chr2 131913606 131913919 -121342664 - MER2 DNA MER2_type 0 345 6 5119 123 41 2 chr2 131914409 131915507 -121341076 + L1PA10 LINE L1 4471 5597 -571 1320 87 82 5 chr2 131915632 131915827 -121340756 + L1PA10 LINE L1 5946 6155 -13 197 32 0 32 chr2 131915830 131915861 -121340722 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 187 350 0 10 chr2 131916226 131916326 -121340257 + MIR SINE MIR 45 143 -65 195 129 0 0 chr2 131916685 131916716 -121339867 + (TTA)n Simple_repeat Simple_repeat 2 32 0 429 323 139 5 chr2 131918004 131918205 -121338378 - MIR SINE MIR -15 247 20 459 297 113 5 chr2 131918865 131919077 -121337506 + MIR SINE MIR 28 262 0 2055 226 104 19 chr2 131919220 131919751 -121336832 + MLT1A1-int LTR MaLR 1160 1735 0 1283 212 47 44 chr2 131919752 131920115 -121336468 + MLT1A1 LTR MaLR 2 365 0 790 165 13 0 chr2 131920119 131920277 -121336306 + L1MB3 LINE L1 6022 6181 -2 250 384 68 14 chr2 131920347 131920626 -121335957 + L2 LINE L2 2807 3100 -172 2273 283 42 28 chr2 131920727 131921503 -121335080 + L1ME LINE L1 856 1656 -4740 2008 141 0 16 chr2 131921503 131921808 -121334775 + AluJo SINE Alu 3 302 -10 2273 283 42 28 chr2 131921808 131922231 -121334352 + L1ME LINE L1 1656 2072 -4324 653 260 35 6 chr2 131922233 131922406 -121334177 + MLT1E LTR MaLR 1 178 -415 2137 276 36 7 chr2 131922449 131923353 -121333230 + L1ME LINE L1 4121 5051 -1164 1262 260 28 30 chr2 131923386 131924010 -121332573 + L1ME LINE L1 5264 5887 -348 604 290 90 43 chr2 131924026 131924438 -121332145 + L1ME2 LINE L1 1281 1737 -4803 2260 107 7 3 chr2 131924438 131924748 -121331835 + AluSx SINE Alu 1 311 -1 604 290 90 43 chr2 131924748 131924990 -121331593 + L1ME2 LINE L1 1737 1966 -4574 2597 46 0 0 chr2 131925004 131925309 -121331274 - AluY SINE Alu -6 305 1 1489 143 45 11 chr2 131925437 131925724 -121330859 + L1MA7 LINE L1 5989 6285 -6 34 79 0 0 chr2 131925901 131925977 -121330606 + AT_rich Low_complexity Low_complexity 1 76 0 425 258 33 6 chr2 131926102 131926284 -121330299 + L1ME2 LINE L1 2598 2784 -3756 2395 245 92 37 chr2 131926470 131927245 -121329338 + L1ME2 LINE L1 2885 3616 -2924 1908 128 7 35 chr2 131927245 131927537 -121329046 + AluSx SINE Alu 1 327 0 346 47 0 0 chr2 131927537 131927580 -121329003 + (TAAA)n Simple_repeat Simple_repeat 2 72 0 2395 245 92 37 chr2 131927580 131928614 -121327969 + L1ME2 LINE L1 3616 4751 -1789 1049 294 73 37 chr2 131928736 131928940 -121327643 + MLT2F LTR ERVL 184 379 -284 1060 234 63 41 chr2 131928940 131929304 -121327279 - MLT1A2 LTR MaLR -2 372 1 1049 294 73 37 chr2 131929304 131929562 -121327021 + MLT2F LTR ERVL 379 663 0 1662 230 95 32 chr2 131929565 131930157 -121326426 + L1ME2 LINE L1 4750 5398 -1142 2106 125 13 3 chr2 131930157 131930461 -121326122 + AluSq SINE Alu 2 308 -5 1662 230 95 32 chr2 131930461 131930594 -121325989 + L1ME2 LINE L1 5398 5521 -1019 691 156 9 0 chr2 131930595 131930704 -121325879 - Tigger3(Golem) DNA MER2_type 0 3029 2920 780 178 0 0 chr2 131930843 131930961 -121325622 - FLAM_C SINE Alu -15 118 1 412 185 0 0 chr2 131930968 131931033 -121325550 - Tigger3(Golem) DNA MER2_type -2960 69 5 1036 257 86 21 chr2 131931036 131931694 -121324889 + L1ME2 LINE L1 5529 6242 -316 564 131 107 107 chr2 131931695 131931863 -121324720 - L1MD1 LINE L1 -212 6030 5863 343 359 37 28 chr2 131932150 131932367 -121324216 + L1M4 LINE L1 5 223 -6319 968 252 102 52 chr2 131932678 131933778 -121322805 + L1M4 LINE L1 802 5767 -877 818 164 102 6 chr2 131935422 131935599 -121320984 - MLT1A1 LTR MaLR -171 194 1 24 32 0 0 chr2 131935805 131935836 -121320747 + AT_rich Low_complexity Low_complexity 1 31 0 414 292 103 38 chr2 131935878 131936248 -121320335 - Charlie8 DNA MER1_type -1949 468 75 474 327 155 29 chr2 131937252 131937671 -121318912 + L1MEd LINE L1 435 906 -5213 737 247 13 13 chr2 131938209 131938367 -121318216 + FRAM SINE Alu 1 158 -8 11587 190 7 21 chr2 131938368 131940954 -121315629 + L1PA15-16 LINE L1 2764 5311 -1538 1205 143 0 14 chr2 131941056 131941265 -121315318 + MER4C LTR ERV1 260 465 0 197 275 29 14 chr2 131945257 131945326 -121311257 - MIR SINE MIR -132 130 61 2162 110 0 3 chr2 131945438 131945730 -121310853 - AluSg SINE Alu -17 293 3 383 266 14 56 chr2 131945919 131946062 -121310521 - MER21A LTR ERV1 -123 808 672 1423 305 68 32 chr2 131946130 131946819 -121309764 - MER21B LTR ERV1 -149 714 1 207 244 0 24 chr2 131946889 131946930 -121309653 - L2 LINE L2 -62 3210 3171 632 241 132 19 chr2 131946953 131947165 -121309418 + MIR SINE MIR 2 237 -25 305 255 47 9 chr2 131947285 131947391 -121309192 - MER112 DNA MER1_type -9 251 142 348 119 0 0 chr2 131947414 131947473 -121309110 + (TG)n Simple_repeat Simple_repeat 2 60 0 1894 171 0 10 chr2 131947818 131948127 -121308456 + AluJo SINE Alu 2 307 -5 842 325 100 24 chr2 131948156 131948577 -121308006 - L2 LINE L2 -1 3312 2860 227 256 173 0 chr2 131948770 131948888 -121307695 - MIR SINE MIR -24 238 90 1702 208 137 61 chr2 131949686 131950442 -121306141 + LTR1B LTR ERV1 1 1020 0 390 261 118 19 chr2 131950492 131950653 -121305930 + MER77 LTR ERV1 41 217 -388 * 1272 261 47 33 chr2 131950651 131951073 -121305510 + MER77 LTR ERV1 172 599 -6 623 271 169 34 chr2 131951349 131951762 -121304821 + L2 LINE L2 2845 3313 0 198 103 0 0 chr2 131952676 131952705 -121303878 + (TG)n Simple_repeat Simple_repeat 2 30 0 28 0 0 0 chr2 131952758 131952786 -121303797 + AT_rich Low_complexity Low_complexity 1 28 0 1411 246 93 34 chr2 131953083 131953526 -121303057 - MLT2B1 LTR ERVL -51 469 1 1663 156 31 70 chr2 131953532 131953840 -121302743 - ERVL-B1 LTR ERVL -29 5735 5446 4013 103 15 5 chr2 131953840 131954425 -121302158 + L1PA11 LINE L1 5581 6171 -3 1663 156 31 70 chr2 131954425 131954533 -121302050 - ERVL-B1 LTR ERVL -318 5446 5335 2083 137 7 160 chr2 131954533 131954863 -121301720 - MER31A LTR ERV1 -10 475 184 407 141 0 56 chr2 131954863 131954934 -121301649 + AluJ/FRAM SINE Alu 228 294 -18 2083 137 7 160 chr2 131954934 131955094 -121301489 - MER31A LTR ERV1 -301 184 1 4533 162 37 22 chr2 131955094 131955190 -121301393 - ERVL-B1 LTR ERVL -422 5342 5249 1425 213 36 28 chr2 131955190 131955552 -121301031 - MLT1A1 LTR MaLR 0 365 1 4533 162 37 22 chr2 131955552 131956300 -121300283 - ERVL-B1 LTR ERVL -515 5249 4486 522 121 24 0 chr2 131956305 131956388 -121300195 - ERVL-B1 LTR ERVL -1431 4333 4249 * 2100 160 10 33 chr2 131956387 131956518 -121300065 - ERVL LTR ERVL -1276 4488 4356 2065 170 113 3 chr2 131956518 131956907 -121299676 - MSTB1 LTR MaLR 0 432 1 6668 223 75 5 chr2 131956907 131958450 -121298133 - MSTB1-int LTR MaLR 0 1651 1 2340 174 21 2 chr2 131958450 131958874 -121297709 - MSTB1 LTR MaLR 0 432 1 2100 160 10 33 chr2 131958874 131959133 -121297450 - ERVL LTR ERVL -1405 4359 4105 205 273 106 0 chr2 131959473 131959539 -121297044 - L2 LINE L2 0 3313 3241 21 0 0 0 chr2 131959605 131959626 -121296957 + AT_rich Low_complexity Low_complexity 1 21 0 1606 175 32 14 chr2 131959631 131959911 -121296672 + AluJb SINE Alu 1 285 -27 5747 108 16 2 chr2 131960045 131960931 -121295652 - L1PA11 LINE L1 -2 6172 5275 197 213 0 21 chr2 131962009 131962056 -121294527 + MIR SINE MIR 113 158 -104 238 267 158 17 chr2 131962405 131962525 -121294058 - MIR SINE MIR -63 199 63 386 284 7 64 chr2 131962858 131962938 -121293645 - L2 LINE L2 -4 3268 3198 1500 189 27 37 chr2 131962938 131963234 -121293349 + AluJb SINE Alu 1 293 -19 386 284 7 64 chr2 131963234 131963294 -121293289 - L2 LINE L2 -74 3198 3136 2027 133 7 16 chr2 131963595 131963903 -121292680 - AluSg SINE Alu -5 305 1 487 245 95 73 chr2 131964502 131964876 -121291707 - L2 LINE L2 -192 3080 2695 2790 130 41 9 chr2 131964879 131965526 -121291057 - MER39 LTR ERV1 0 639 1 202 370 37 37 chr2 131965984 131966119 -121290464 + L2 LINE L2 3137 3271 -1 1084 283 139 0 chr2 131966968 131967336 -121289247 - L2 LINE L2 -2 3311 2893 1447 160 28 0 chr2 131968212 131968499 -121288084 + L1MA7 LINE L1 5997 6291 0 286 353 22 38 chr2 131969260 131969444 -121287139 - L2 LINE L2 0 3313 3133 183 277 69 50 chr2 131969434 131969535 -121287048 + MIR SINE MIR 140 242 -20 * 274 254 26 18 chr2 131969613 131969727 -121286856 + L1MCc LINE L1 36 150 -6273 261 278 24 32 chr2 131969796 131969922 -121286661 + L1MCc LINE L1 260 384 -6039 477 200 14 29 chr2 131970525 131970665 -121285918 + L1MCc LINE L1 1120 1257 -5166 1031 264 141 27 chr2 131970878 131972146 -121284437 + L1MCc LINE L1 1486 2990 -3951 445 333 63 26 chr2 131972404 131972785 -121283798 + L1ME2 LINE L1 25 419 -6004 26 30 0 0 chr2 131972785 131972818 -121283765 + AT_rich Low_complexity Low_complexity 1 33 0 3875 254 62 52 chr2 131973105 131976336 -121280247 + L1ME2 LINE L1 827 4022 -2919 1667 204 13 0 chr2 131976336 131976644 -121279939 + AluJb SINE Alu 1 312 0 3875 254 62 52 chr2 131976644 131977267 -121279316 + L1ME2 LINE L1 4022 4901 -2040 1793 182 0 3 chr2 131977267 131977564 -121279019 - AluJb SINE Alu -16 296 1 3875 254 62 52 chr2 131977564 131977675 -121278908 + L1ME2 LINE L1 4901 5009 -1932 1131 243 114 30 chr2 131977755 131978254 -121278329 + L1ME2 LINE L1 5423 5963 -978 620 173 29 0 chr2 131978371 131978475 -121278108 - FRAM SINE Alu -24 152 46 208 291 87 29 chr2 131978834 131978937 -121277646 + MIR SINE MIR 36 144 -118 889 115 135 14 chr2 131979728 131979876 -121276707 + MSTA LTR MaLR 263 428 0 512 313 90 20 chr2 131979876 131980278 -121276305 + L1MEc LINE L1 1458 1887 -4509 397 197 94 8 chr2 131980270 131980387 -121276196 + L1ME2 LINE L1 6600 6726 -235 * 3448 226 34 48 chr2 131980383 131981469 -121275114 + L1M4 LINE L1 3710 4780 -1366 275 264 0 0 chr2 131981480 131981573 -121275010 + L1ME2 LINE L1 6865 7119 -10 950 304 97 15 chr2 131982435 131982898 -121273685 - LTR33 LTR ERVL -1 520 20 2980 83 18 45 chr2 131982900 131983345 -121273238 - MLT2A1 LTR ERVL -11 433 1 366 341 50 11 chr2 131983369 131983548 -121273035 + MIR SINE MIR 71 256 -6 201 294 0 0 chr2 131984789 131984840 -121271743 + GA-rich Low_complexity Low_complexity 1 51 0 247 271 44 103 chr2 131985183 131985386 -121271197 - L2 LINE L2 -4 3309 3119 409 294 36 72 chr2 131985510 131985602 -121270981 + L1MB5 LINE L1 2 96 -6446 2138 76 9 57 chr2 131985602 131985917 -121270666 - AluSx SINE Alu -12 300 1 409 294 36 72 chr2 131985917 131986100 -121270483 + L1MB5 LINE L1 96 267 -6275 242 269 194 46 chr2 131986526 131986634 -121269949 - L2 LINE L2 -16 3297 3174 760 159 28 97 chr2 131987493 131987780 -121268803 - MER31-int LTR ERV1 -3250 1686 1270 9493 231 78 18 chr2 131989353 131990254 -121266329 + L1MB5 LINE L1 581 1427 -5245 655 92 18 0 chr2 131990254 131990363 -121266220 + (TA)n Simple_repeat Simple_repeat 2 112 0 9493 231 78 18 chr2 131990363 131991935 -121264648 + L1MB5 LINE L1 1427 2904 -3768 1876 170 0 0 chr2 131991935 131992248 -121264335 - AluSx SINE Alu 0 313 1 9493 231 78 18 chr2 131992248 131995533 -121261050 + L1MB5 LINE L1 2904 6671 -1 416 347 68 54 chr2 131995575 131996148 -121260435 - L2 LINE L2 -339 2975 2395 282 325 95 71 chr2 131996745 131997319 -121259264 - L2 LINE L2 -89 3183 2597 339 241 46 0 chr2 131997374 131997461 -121259122 + MIR SINE MIR 79 169 -93 2159 108 0 0 chr2 131997461 131997779 -121258804 - AluSq SINE Alu 0 318 1 208 315 72 9 chr2 131998049 131998160 -121258423 + MIR SINE MIR 23 140 -122 1751 171 7 3 chr2 131998556 131998842 -121257741 + AluJo SINE Alu 1 287 -25 2095 236 111 17 chr2 131998914 131999571 -121257012 + L1M4 LINE L1 3504 4222 -1924 * 2186 220 56 17 chr2 131999560 132000342 -121256241 + L1M4 LINE L1 4993 5818 -360 803 127 10 151 chr2 132000345 132000550 -121256033 - MER6 DNA MER2_type 0 865 690 1973 120 0 4 chr2 132000550 132000824 -121255759 + AluSx SINE Alu 1 273 -39 1340 51 11 0 chr2 132000827 132001003 -121255580 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 480 191 11 33 chr2 132001013 132001196 -121255387 + GA-rich Low_complexity Low_complexity 2 180 0 5597 127 19 2 chr2 132001487 132002924 -121253659 + L1PA14 LINE L1 4704 6158 -3 481 278 22 33 chr2 132003063 132003333 -121253250 + L1ME3A LINE L1 1011 1277 -4928 246 197 239 43 chr2 132003513 132003630 -121252953 + L1ME3A LINE L1 1533 1672 -4724 288 256 75 102 chr2 132004107 132004942 -121251641 + L1ME3A LINE L1 2215 3026 -3189 1400 183 92 3 chr2 132004942 132005270 -121251313 - MER46B DNA MER2_type -4 232 1 288 256 75 102 chr2 132005270 132005324 -121251259 + L1ME3A LINE L1 3026 3080 -3135 289 316 108 15 chr2 132005481 132006087 -121250496 + L1ME3A LINE L1 3352 4091 -2124 13306 80 8 3 chr2 132006087 132008699 -121247884 - L1PA7 LINE L1 -6 6148 3527 289 316 108 15 chr2 132008699 132008863 -121247720 + L1ME3A LINE L1 4091 4238 -1977 1122 278 93 24 chr2 132008931 132009852 -121246731 + L1ME3A LINE L1 5032 6019 -220 25 51 0 0 chr2 132010158 132010197 -121246386 + AT_rich Low_complexity Low_complexity 1 39 0 252 239 136 0 chr2 132010444 132010532 -121246051 + MIR SINE MIR 75 174 -88 451 249 76 67 chr2 132010557 132010898 -121245685 + L1ME4a LINE L1 5540 5883 -238 333 346 54 32 chr2 132012094 132012279 -121244304 - MIR SINE MIR -54 208 20 2069 135 7 0 chr2 132012726 132013023 -121243560 + AluSx SINE Alu 1 299 -13 636 289 21 21 chr2 132013837 132014027 -121242556 + MIR3 SINE MIR 6 195 -13 264 242 0 0 chr2 132014687 132014753 -121241830 + MIR SINE MIR 89 154 -108 278 272 127 19 chr2 132015476 132015634 -121240949 - MIR SINE MIR -34 228 54 1071 194 23 9 chr2 132015642 132015858 -121240725 - MER20 DNA MER1_type 0 219 1 201 341 28 78 chr2 132016069 132016248 -121240335 + MER5A DNA MER1_type 17 186 -3 1463 230 89 41 chr2 132016312 132016917 -121239666 - LTR27 LTR ERV1 -2 634 1 225 155 0 169 chr2 132017338 132017409 -121239174 - MER5A DNA MER1_type -28 161 103 920 203 89 5 chr2 132018361 132018563 -121238020 + MER20 DNA MER1_type 1 219 0 2332 113 84 68 chr2 132018577 132019167 -121237416 - MER4E LTR ERV1 0 779 1 381 274 97 4 chr2 132019171 132019298 -121237285 - MIR SINE MIR -56 152 24 835 231 45 45 chr2 132020147 132020484 -121236099 + L1M4 LINE L1 4205 4541 -1605 1541 190 45 72 chr2 132020522 132020965 -121235618 + L1MC2 LINE L1 411 841 -5204 1823 224 159 44 chr2 132021011 132021438 -121235145 - MER21B LTR ERV1 -74 857 481 3342 130 39 18 chr2 132021438 132021953 -121234630 - MER1A DNA MER1_type -1 526 1 1823 224 159 44 chr2 132021953 132022213 -121234370 - MER21B LTR ERV1 -450 481 1 576 224 30 8 chr2 132022275 132022409 -121234174 - LTR45 LTR ERV1 0 525 389 2908 249 52 36 chr2 132022825 132023502 -121233081 + L1MC2 LINE L1 2187 2852 -3712 2155 129 7 0 chr2 132023502 132023796 -121232787 + AluSg SINE Alu 1 296 -14 2908 249 52 36 chr2 132023796 132023972 -121232611 + L1MC2 LINE L1 2852 3024 -3540 364 111 49 62 chr2 132023972 132024053 -121232530 - MADE1 DNA Mariner 0 80 1 2908 249 52 36 chr2 132024053 132024806 -121231777 + L1MC2 LINE L1 3024 3813 -2751 558 165 0 0 chr2 132024807 132024910 -121231673 + L1ME LINE L1 4456 4558 -1588 * 6257 220 46 28 chr2 132024907 132027713 -121228870 + L1MC2 LINE L1 3790 6628 -134 496 291 89 98 chr2 132028100 132028304 -121228279 + L1ME LINE L1 5197 5401 -720 1629 35 0 5 chr2 132028304 132028546 -121228037 + L1PA4 LINE L1 5956 6155 0 496 291 89 98 chr2 132028546 132028783 -121227800 + L1ME LINE L1 5401 5682 -439 363 267 0 0 chr2 132028791 132028881 -121227702 - MIR SINE MIR -2 260 171 339 344 47 0 chr2 132029430 132029558 -121227025 + L2 LINE L2 3139 3272 0 198 0 0 0 chr2 132030527 132030549 -121226034 + (TA)n Simple_repeat Simple_repeat 2 23 0 433 295 68 0 chr2 132030815 132031022 -121225561 + L1ME3A LINE L1 5419 5639 -523 180 0 0 0 chr2 132031038 132031058 -121225525 + (TG)n Simple_repeat Simple_repeat 2 21 0 270 192 41 29 chr2 132031063 132031235 -121225348 + (TATATG)n Simple_repeat Simple_repeat 4 177 0 1186 226 34 120 chr2 132031240 132031591 -121224992 + L1ME3A LINE L1 5639 5924 -246 2252 101 27 0 chr2 132031591 132031889 -121224694 + AluSc SINE Alu 1 306 -3 1186 226 34 120 chr2 132031889 132032103 -121224480 + L1ME3A LINE L1 5924 6155 -15 1119 310 243 35 chr2 132032130 132033575 -121223008 - L2 LINE L2 -1480 1834 90 197 356 0 0 chr2 132033793 132033866 -121222717 - L3 LINE CR1 -753 824 752 392 257 68 82 chr2 132033908 132034114 -121222469 - HAL1 LINE L1 -34 2473 2271 449 273 30 76 chr2 132035436 132035740 -121220843 - HAL1 LINE L1 -841 1666 1377 186 208 10 20 chr2 132035868 132035969 -121220614 + (TA)n Simple_repeat Simple_repeat 2 101 0 377 253 132 46 chr2 132035969 132036143 -121220440 - HAL1 LINE L1 -1226 1281 1093 1310 173 18 36 chr2 132036146 132036202 -121220381 - MSTA LTR MaLR -155 273 218 2011 161 0 3 chr2 132036202 132036507 -121220076 + AluSx SINE Alu 1 304 -8 1310 173 18 36 chr2 132036507 132036728 -121219855 - MSTA LTR MaLR -210 218 1 1078 151 149 84 chr2 132037715 132038098 -121218485 + LTR48 LTR ERV1 1 408 -379 224 245 238 0 chr2 132038499 132038605 -121217978 + MIR3 SINE MIR 28 155 -53 2090 210 81 44 chr2 132039138 132039561 -121217022 + LTR48B LTR ERV1 1 456 -188 1881 131 201 6 chr2 132039561 132039919 -121216664 + MSTA LTR MaLR 1 428 0 2090 210 81 44 chr2 132039919 132040114 -121216469 + LTR48B LTR ERV1 456 642 -2 2598 81 63 72 chr2 132040702 132040741 -121215842 - MLT2A1 LTR ERVL -2 442 404 279 0 0 0 chr2 132040741 132040772 -121215811 + (TA)n Simple_repeat Simple_repeat 1 31 0 * 351 0 0 0 chr2 132040771 132040810 -121215773 + (GA)n Simple_repeat Simple_repeat 2 40 0 2598 81 63 72 chr2 132040772 132041216 -121215367 - MLT2A1 LTR ERVL -40 404 1 42195 72 17 1 chr2 132041216 132046784 -121209799 - HERVL-A1-A1 LTR ERVL 0 5654 1 3225 88 18 16 chr2 132046784 132047227 -121209356 - MLT2A1 LTR ERVL 0 444 1 411 242 59 20 chr2 132047479 132047632 -121208951 + L1ME4a LINE L1 5585 5743 -378 246 254 123 14 chr2 132047667 132047805 -121208778 + L1ME4a LINE L1 5845 5997 -124 391 315 97 9 chr2 132048626 132048842 -121207741 - MIR SINE MIR -8 254 20 2286 81 3 3 chr2 132049322 132049640 -121206943 + AluSp SINE Alu 4 321 0 229 300 50 0 chr2 132049710 132049770 -121206813 - MIR SINE MIR -89 173 111 265 298 113 57 chr2 132052164 132052305 -121204278 + MIR SINE MIR 106 254 -8 414 292 64 68 chr2 132053602 132054071 -121202512 - L1MC/D LINE L1 -2032 5776 5310 204 276 53 0 chr2 132054084 132054160 -121202423 - MIR SINE MIR -76 132 53 * 279 264 101 63 chr2 132054136 132054295 -121202288 + MIR SINE MIR 7 169 -69 1225 137 0 52 chr2 132054545 132054756 -121201827 - AluSg/x SINE Alu 0 309 110 2325 99 3 13 chr2 132056219 132056532 -121200051 - AluSp SINE Alu -3 310 1 501 248 23 31 chr2 132057811 132057940 -121198643 + MER45A DNA AcHobo 51 178 0 293 277 25 59 chr2 132057941 132058060 -121198523 + MIR SINE MIR 131 245 -17 2244 122 0 0 chr2 132058266 132058570 -121198013 - AluSc SINE Alu -5 304 1 191 234 26 52 chr2 132058630 132058707 -121197876 + MIR SINE MIR 58 132 -76 459 0 0 0 chr2 132059185 132059236 -121197347 + (TC)n Simple_repeat Simple_repeat 2 52 0 202 250 118 0 chr2 132059556 132059624 -121196959 - MIR SINE MIR -70 192 117 605 219 189 25 chr2 132059718 132059919 -121196664 - ORSL DNA AcHobo -28 247 14 336 138 0 0 chr2 132060181 132060246 -121196337 + (TC)n Simple_repeat Simple_repeat 2 66 0 1256 184 23 8 chr2 132060468 132060724 -121195859 + Tigger7 DNA MER2_type 2232 2491 0 269 288 69 56 chr2 132061672 132061832 -121194751 - MIR3 SINE MIR -39 169 8 573 76 0 0 chr2 132061942 132062021 -121194562 + (CA)n Simple_repeat Simple_repeat 2 80 0 2504 84 3 0 chr2 132062628 132062936 -121193647 - AluSp SINE Alu -4 309 1 204 223 21 128 chr2 132064029 132064123 -121192460 - L2 LINE L2 -3120 194 111 206 302 32 0 chr2 132064590 132064653 -121191930 - MIR SINE MIR -185 77 13 616 254 30 10 chr2 132065999 132066200 -121190383 + MER58A DNA MER1_type 1 205 -19 1033 301 70 9 chr2 132066900 132067359 -121189224 - L2 LINE L2 -8 3305 2819 285 109 0 0 chr2 132067637 132067683 -121188900 + (CA)n Simple_repeat Simple_repeat 1 46 0 229 365 0 0 chr2 132068791 132068865 -121187718 - MIR SINE MIR -93 115 42 231 146 0 0 chr2 132069019 132069060 -121187523 + (CA)n Simple_repeat Simple_repeat 2 42 0 380 136 57 11 chr2 132070150 132070238 -121186345 + MER53 DNA DNA 96 187 -2 287 270 0 0 chr2 132070250 132070313 -121186270 + MER5B DNA MER1_type 108 170 -8 201 132 0 0 chr2 132072340 132072378 -121184205 + (TG)n Simple_repeat Simple_repeat 1 38 0 360 230 0 0 chr2 132072426 132072561 -121184022 + (TG)n Simple_repeat Simple_repeat 1 135 0 243 223 43 21 chr2 132072576 132072670 -121183913 + (TGAG)n Simple_repeat Simple_repeat 2 97 0 549 188 0 0 chr2 132072674 132072828 -121183755 + (TG)n Simple_repeat Simple_repeat 2 155 0 2273 107 0 3 chr2 132073173 132073483 -121183100 + AluY SINE Alu 1 309 -2 213 328 16 0 chr2 132074518 132074579 -121182004 + L2 LINE L2 3193 3254 -18 2001 118 14 3 chr2 132074829 132075117 -121181466 + AluSp SINE Alu 1 291 -22 411 241 0 11 chr2 132075166 132075253 -121181330 + MER58 DNA MER1_type 7 92 -123 479 298 140 28 chr2 132076284 132076784 -121179799 - L1ME4a LINE L1 -2 6119 5564 560 137 11 11 chr2 132076946 132077041 -121179542 + AluY SINE Alu 217 311 0 2166 110 0 7 chr2 132078271 132078562 -121178021 + AluSx SINE Alu 4 292 -20 2158 118 7 0 chr2 132080610 132080915 -121175668 - AluSx SINE Alu -5 307 1 257 236 123 47 chr2 132081778 132081884 -121174699 - L2 LINE L2 -14 3258 3145 289 276 79 55 chr2 132082412 132082526 -121174057 + L2 LINE L2 2932 3048 -224 655 251 132 0 chr2 132082526 132082693 -121173890 - MER5A DNA MER1_type 0 189 1 480 309 76 14 chr2 132083177 132083400 -121173183 + MIR SINE MIR 16 252 -10 299 281 0 0 chr2 132083641 132083705 -121172878 - L2 LINE L2 0 3313 3250 416 282 78 24 chr2 132084456 132084657 -121171926 + MIR SINE MIR 19 226 -36 1535 168 64 82 chr2 132084657 132085097 -121171486 + MSTB1 LTR MaLR 1 432 0 233 244 39 64 chr2 132085159 132085237 -121171346 - L2 LINE L2 -5 3308 3233 239 242 15 15 chr2 132086208 132086274 -121170309 - MER103 DNA DNA -100 66 1 337 250 0 0 chr2 132087248 132087312 -121169271 - L2 LINE L2 0 3313 3250 351 298 78 24 chr2 132088067 132088268 -121168315 + MIR SINE MIR 19 226 -36 1653 157 64 82 chr2 132088268 132088708 -121167875 + MSTB1 LTR MaLR 1 432 0 187 274 32 65 chr2 132088770 132088832 -121167751 - L2 LINE L2 -5 3308 3249 209 213 0 21 chr2 132089346 132089393 -121167190 + (TATG)n Simple_repeat Simple_repeat 2 47 0 239 242 15 15 chr2 132089795 132089861 -121166722 - MER103 DNA DNA -100 66 1 286 200 33 17 chr2 132090440 132090500 -121166083 - MER81 DNA DNA 0 114 54 184 200 36 0 chr2 132090574 132090629 -121165954 + GA-rich Low_complexity Low_complexity 4 60 0 1264 218 80 21 chr2 132090725 132091064 -121165519 + MER47A DNA MER2_type 7 365 -1 245 304 26 52 chr2 132092330 132092445 -121164138 + MIR SINE MIR 49 160 -102 264 290 0 14 chr2 132094061 132094130 -121162453 + G-rich Low_complexity Low_complexity 3 70 0 457 296 41 18 chr2 132094160 132094329 -121162254 - MIR SINE MIR -55 207 35 487 286 24 53 chr2 132095723 132095926 -121160657 + MIR SINE MIR 2 196 -66 1680 256 33 9 chr2 132095926 132096375 -121160208 - LTR40b LTR ERVL 0 462 3 487 286 24 53 chr2 132096375 132096428 -121160155 + MIR SINE MIR 196 249 -13 2161 98 0 3 chr2 132097017 132097331 -121159252 - AluSq SINE Alu 0 313 1 734 106 29 0 chr2 132098069 132098173 -121158410 - U6 snRNA snRNA 0 107 1 2080 135 0 0 chr2 132099592 132099895 -121156688 + AluSx SINE Alu 1 303 -9 207 186 0 0 chr2 132100309 132100352 -121156231 + (TA)n Simple_repeat Simple_repeat 1 43 0 1232 96 45 50 chr2 132100358 132100557 -121156026 + Tigger2a DNA MER2_type 5 202 -232 833 193 0 6 chr2 132100557 132100718 -121155865 - FRAM SINE Alu -7 169 10 1071 185 84 26 chr2 132100726 132100953 -121155630 + Tigger2a DNA MER2_type 204 443 -1 342 214 11 67 chr2 132100961 132101050 -121155533 + L1MC4 LINE L1 6620 6703 -1339 970 283 31 16 chr2 132101151 132101536 -121155047 + L1ME4a LINE L1 5530 5920 -201 26 30 0 0 chr2 132101803 132101836 -121154747 + AT_rich Low_complexity Low_complexity 1 33 0 665 213 99 50 chr2 132102160 132102362 -121154221 - MIR SINE MIR -5 257 46 205 308 144 19 chr2 132102902 132103006 -121153577 - L2 LINE L2 -1 3271 3155 283 335 43 34 chr2 132103321 132103530 -121153053 - L2 LINE L2 -432 2882 2672 1628 112 0 0 chr2 132103835 132104058 -121152525 - AluSc SINE Alu -16 293 71 452 299 66 24 chr2 132104371 132104786 -121151797 + L1MEd LINE L1 1380 1852 -4755 21 36 0 0 chr2 132104801 132104829 -121151754 + AT_rich Low_complexity Low_complexity 1 28 0 748 280 184 22 chr2 132104887 132105311 -121151272 + L1MEd LINE L1 2101 2637 -3947 2153 279 87 79 chr2 132105315 132105543 -121151040 + L1MEd LINE L1 2712 2937 -3489 198 118 0 0 chr2 132105543 132105577 -121151006 + (TAGG)n Simple_repeat Simple_repeat 2 35 0 2153 279 87 79 chr2 132105577 132105703 -121150880 + L1MEd LINE L1 2937 3061 -3365 1846 152 3 7 chr2 132105703 132106006 -121150577 + AluSg SINE Alu 1 302 -8 2153 279 87 79 chr2 132106006 132106327 -121150256 + L1MEd LINE L1 3061 3378 -3048 8436 124 17 8 chr2 132106327 132107617 -121148966 + HSMAR2 DNA Mariner 1 1302 0 2153 279 87 79 chr2 132107617 132109355 -121147228 + L1MEd LINE L1 3378 5146 -1280 526 240 129 27 chr2 132109457 132109815 -121146768 - LTR50 LTR ERVL -306 489 10 295 252 26 67 chr2 132110481 132110635 -121145948 + MLT1K LTR MaLR 140 264 -324 623 275 42 10 chr2 132110962 132111155 -121145428 + Charlie8 DNA MER1_type 61 259 -2158 504 308 26 0 chr2 132111245 132111401 -121145182 + Charlie8 DNA MER1_type 383 542 -1875 688 197 67 139 chr2 132111603 132111953 -121144630 - MLT1A1 LTR MaLR 0 365 87 2162 100 0 0 chr2 132111953 132112243 -121144340 - AluSc SINE Alu -19 290 1 688 197 67 139 chr2 132112243 132112325 -121144258 - MLT1A1 LTR MaLR -278 87 1 2100 110 10 0 chr2 132112696 132112988 -121143595 + AluSc SINE Alu 1 295 -14 283 243 56 83 chr2 132113074 132113218 -121143365 - MIR SINE MIR 0 262 123 333 272 177 19 chr2 132113238 132113396 -121143187 + L2 LINE L2 2870 3052 -220 229 229 0 0 chr2 132114055 132114103 -121142480 + (TTTA)n Simple_repeat Simple_repeat 3 50 0 228 316 0 0 chr2 132114065 132114144 -121142439 + (TTCA)n Simple_repeat Simple_repeat 2 80 0 * 213 277 21 32 chr2 132114950 132115044 -121141539 + (TTCA)n Simple_repeat Simple_repeat 1 93 0 192 367 11 0 chr2 132115478 132115568 -121141015 + MER5B DNA MER1_type 25 115 -63 227 294 59 20 chr2 132116201 132116303 -121140280 + MIR3 SINE MIR 99 204 -4 374 268 111 21 chr2 132118177 132118412 -121138171 + MLT1L LTR MaLR 352 607 -8 228 35 0 0 chr2 132118414 132118443 -121138140 + (TTG)n Simple_repeat Simple_repeat 2 30 0 448 205 0 0 chr2 132119587 132119665 -121136918 + L1M3d LINE L1 415 492 -5811 52 17 0 0 chr2 132119675 132119734 -121136849 + AT_rich Low_complexity Low_complexity 1 59 0 926 344 31 18 chr2 132119771 132120161 -121136422 + L1M3d LINE L1 530 924 -5379 9715 233 41 15 chr2 132120162 132124260 -121132323 + L1M3d LINE L1 819 4972 -1410 411 321 29 0 chr2 132124281 132124421 -121132162 + MIR SINE MIR 44 187 -75 273 248 80 44 chr2 132125253 132125366 -121131217 - MER63 DNA MER1_type -93 743 1 593 250 101 10 chr2 132126213 132126421 -121130162 + L1MC5 LINE L1 7268 7494 -467 252 0 0 0 chr2 132127009 132127037 -121129546 + (CAG)n Simple_repeat Simple_repeat 3 30 0 2058 108 27 0 chr2 132127292 132127587 -121128996 + AluSx SINE Alu 1 303 -9 286 241 0 0 chr2 132127830 132127888 -121128695 - MIR SINE MIR -69 139 82 1468 193 84 21 chr2 132129052 132129384 -121127199 + MLT2D LTR ERVL 1 353 -61 198 0 0 0 chr2 132129384 132129406 -121127177 + (TC)n Simple_repeat Simple_repeat 1 22 0 392 264 16 25 chr2 132129859 132129980 -121126603 - MIR SINE MIR -122 140 21 218 392 121 20 chr2 132130091 132130290 -121126293 - L2 LINE L2 -51 3221 3003 2218 92 3 7 chr2 132130443 132130735 -121125848 - AluY SINE Alu -14 297 7 2229 88 0 10 chr2 132130750 132131056 -121125527 - AluY SINE Alu -8 303 1 1309 72 0 0 chr2 132131232 132131385 -121125198 - AluSq SINE Alu -160 153 1 1056 239 31 5 chr2 132133042 132133264 -121123319 + MIR SINE MIR 14 241 -21 2482 70 3 19 chr2 132133562 132133878 -121122705 - AluY SINE Alu 0 311 1 309 305 25 102 chr2 132133913 132134110 -121122473 - L1 LINE L1 -2168 3978 3797 487 155 62 21 chr2 132134144 132134241 -121122342 + FLAM_C SINE Alu 5 105 -38 601 259 9 69 chr2 132134367 132134583 -121122000 - MLT1J LTR MaLR -79 432 230 206 311 119 86 chr2 132135271 132135773 -121120810 - L2 LINE L2 -2120 1194 676 198 0 0 0 chr2 132137449 132137471 -121119112 + (TA)n Simple_repeat Simple_repeat 1 22 0 2228 115 6 19 chr2 132137909 132138222 -121118361 - AluSg SINE Alu -1 309 1 379 302 80 36 chr2 132138905 132139130 -121117453 - MIR SINE MIR 0 262 28 945 30 56 26 chr2 132139277 132139617 -121116966 + (TAGA)n Simple_repeat Simple_repeat 1 350 0 300 267 116 34 chr2 132139857 132140003 -121116580 + MIR SINE MIR 17 174 -88 350 335 82 12 chr2 132140725 132140895 -121115688 - MIR SINE MIR -74 188 7 218 329 25 13 chr2 132141288 132141367 -121115216 + MIR SINE MIR 154 233 -29 245 271 0 8 chr2 132141425 132141554 -121115029 + (CA)n Simple_repeat Simple_repeat 2 129 0 363 259 27 41 chr2 132141753 132141900 -121114683 + MLT1I LTR MaLR 2 146 -263 249 288 98 20 chr2 132141960 132142113 -121114470 + MLT1I LTR MaLR 241 405 -4 451 301 191 28 chr2 132142245 132142570 -121114013 - L2 LINE L2 0 3272 2895 620 129 0 0 chr2 132142730 132142823 -121113760 + AluJ/FLAM SINE Alu 1 93 -219 869 127 28 7 chr2 132142823 132143024 -121113559 + AluSg/x SINE Alu 164 367 0 199 51 0 85 chr2 132143660 132143719 -121112864 + (CCCCG)n Simple_repeat Simple_repeat 5 58 0 289 299 40 33 chr2 132144325 132144464 -121112119 + MIR3 SINE MIR 61 201 -7 2123 50 36 30 chr2 132144910 132145211 -121111372 - AluY SINE Alu -8 303 1 219 143 95 24 chr2 132145457 132145499 -121111084 + L2 LINE L2 3204 3248 -24 554 44 44 0 chr2 132146895 132146985 -121109598 + (TAGA)n Simple_repeat Simple_repeat 4 97 0 626 278 124 0 chr2 132146985 132147219 -121109364 + L1ME LINE L1 5543 5805 -365 200 318 98 8 chr2 132147504 132147524 -121109059 + L2 LINE L2 3168 3185 -128 1953 145 7 3 chr2 132147524 132147814 -121108769 - AluSx SINE Alu -21 291 1 200 318 98 8 chr2 132147814 132147925 -121108658 + L2 LINE L2 3185 3311 -2 2458 92 0 0 chr2 132148067 132148373 -121108210 + AluSq SINE Alu 1 306 -7 808 254 86 60 chr2 132148730 132149182 -121107401 - MLT1H1 LTR MaLR -5 550 87 1125 285 72 41 chr2 132149363 132149428 -121107155 - L2 LINE L2 -893 2421 2359 2095 102 7 33 chr2 132149428 132149731 -121106852 + AluSx SINE Alu 17 311 -1 1125 285 72 41 chr2 132149731 132150153 -121106430 - L2 LINE L2 -955 2359 1919 6236 184 84 30 chr2 132150170 132150703 -121105880 + L1MC3 LINE L1 5058 5561 -585 2103 155 33 25 chr2 132150703 132151064 -121105519 + THE1B LTR MaLR 1 364 0 6236 184 84 30 chr2 132151064 132151807 -121104776 + L1MC3 LINE L1 5561 4970 -1176 2273 102 0 0 chr2 132151807 132152111 -121104472 + AluSx SINE Alu 1 304 0 6236 184 84 30 chr2 132152111 132152571 -121104012 + L1MC3 LINE L1 4969 5403 -743 1540 185 18 15 chr2 132152569 132152828 -121103755 + L1MC3 LINE L1 7262 7524 -261 * 2129 116 45 3 chr2 132152828 132153120 -121103463 + AluSx SINE Alu 1 304 -8 1540 185 18 15 chr2 132153120 132153195 -121103388 + L1MC3 LINE L1 7524 7597 -188 244 274 123 19 chr2 132153206 132153312 -121103271 + L1M4 LINE L1 151 267 -6275 601 242 40 148 chr2 132153459 132154053 -121102530 + L1M4 LINE L1 543 1072 -5470 251 185 62 0 chr2 132154063 132154128 -121102455 + L1M4 LINE L1 2278 2346 -4300 263 241 63 13 chr2 132154128 132154207 -121102376 + MLT1B LTR MaLR 308 390 0 1465 239 77 50 chr2 132154214 132154773 -121101810 + L1MB5 LINE L1 5454 5999 -360 2309 112 0 0 chr2 132154773 132155077 -121101506 - AluSx SINE Alu -8 304 1 1465 239 77 50 chr2 132155077 132155414 -121101169 + L1MB5 LINE L1 5999 6325 -34 432 291 33 18 chr2 132155910 132156078 -121100505 + MIR3 SINE MIR 31 201 -7 183 111 0 0 chr2 132156093 132156120 -121100463 + MIR SINE MIR 56 82 -180 1090 238 167 5 chr2 132156184 132156609 -121099974 - L1M4 LINE L1 -1524 4622 4129 1245 114 93 96 chr2 132156696 132156976 -121099607 - L1P5 LINE L1 -349 5807 5529 260 122 0 0 chr2 132156984 132157033 -121099550 + L1PB4 LINE L1 6107 6155 -1 333 0 0 0 chr2 132158226 132158263 -121098320 + (CA)n Simple_repeat Simple_repeat 1 37 0 255 328 95 0 chr2 132158932 132159048 -121097535 + MIR SINE MIR 117 243 -19 765 246 119 14 chr2 132159259 132159544 -121097039 + MER20B DNA MER1_type 180 494 -289 814 224 60 29 chr2 132159655 132159936 -121096647 + MER20B DNA MER1_type 492 781 -2 215 264 69 0 chr2 132160315 132160387 -121096196 - MIR SINE MIR -69 193 117 319 379 61 38 chr2 132161077 132161420 -121095163 - L2 LINE L2 -1 3271 2921 265 345 185 0 chr2 132161816 132162016 -121094567 - L3 LINE CR1 -48 1529 1293 231 214 48 60 chr2 132162088 132162172 -121094411 + MIR SINE MIR 63 145 -117 197 317 0 17 chr2 132162193 132162253 -121094330 - L3b LINE CR1 -135 1448 1390 720 219 103 30 chr2 132163388 132163621 -121092962 + MIR SINE MIR 13 262 0 1034 200 43 38 chr2 132164164 132164399 -121092184 - MIR SINE MIR 0 262 27 3429 220 127 24 chr2 132164403 132165585 -121090998 - L1MC4 LINE L1 -6 8036 6733 377 329 49 49 chr2 132165593 132165836 -121090747 + L2 LINE L2 2943 3185 -87 2561 118 8 21 chr2 132166679 132167059 -121089524 + THE1C LTR MaLR 1 375 0 180 0 0 0 chr2 132168130 132168150 -121088433 + (A)n Simple_repeat Simple_repeat 1 20 0 229 334 163 25 chr2 132168358 132168783 -121087800 - L2 LINE L2 -9 3263 2781 8608 207 57 9 chr2 132168801 132170628 -121085955 + ERVL LTR ERVL 1591 3505 -2259 312 282 0 0 chr2 132171664 132171749 -121084834 + L1MA9 LINE L1 6228 6312 0 211 208 0 21 chr2 132172405 132172453 -121084130 + (CA)n Simple_repeat Simple_repeat 1 47 0 824 209 159 0 chr2 132172761 132172981 -121083602 - MIR SINE MIR -2 260 6 492 255 64 13 chr2 132173016 132173173 -121083410 - MIR SINE MIR 0 262 98 1034 260 8 16 chr2 132173220 132173470 -121083113 + Tigger7 DNA MER2_type 20 267 -466 570 140 10 40 chr2 132173469 132173482 -121083101 + Tigger7 DNA MER2_type 2390 2402 -85 * 1769 179 20 15 chr2 132173482 132173823 -121082760 - MER2 DNA MER2_type 0 344 2 570 140 10 40 chr2 132173823 132173909 -121082674 + Tigger7 DNA MER2_type 2402 2486 -1 428 263 58 120 chr2 132173987 132174505 -121082078 + HAL1b LINE L1 226 711 -637 696 268 59 55 chr2 132174529 132175003 -121081580 + HAL1b LINE L1 513 988 -360 268 64 43 0 chr2 132177122 132177169 -121079414 + (TC)n Simple_repeat Simple_repeat 1 49 0 2114 129 64 14 chr2 132177572 132177929 -121078654 - THE1C LTR MaLR 0 375 1 264 261 134 51 chr2 132178406 132178563 -121078020 - MIR SINE MIR -65 197 28 197 260 0 20 chr2 132178727 132178777 -121077806 - MIR SINE MIR -115 147 99 2619 177 25 0 chr2 132379230 132379755 -120876828 - L1 LINE L1 -1929 4217 3680 2020 139 35 35 chr2 132379757 132380132 -120876451 + THE1C LTR MaLR 1 375 0 3163 115 78 6 chr2 132380134 132380657 -120875926 + THE1C-int LTR MaLR 3 563 -1017 348 292 68 28 chr2 132381200 132381383 -120875200 - MIR SINE MIR -67 141 1 190 267 22 0 chr2 132382478 132382568 -120874015 + (TCCA)n Simple_repeat Simple_repeat 4 95 0 236 281 16 0 chr2 132382570 132382634 -120873949 - L2 LINE L2 0 3272 3208 2510 77 0 0 chr2 132383701 132384001 -120872582 + AluSg SINE Alu 1 300 -10 802 198 119 45 chr2 132384233 132384501 -120872082 + MLT2D LTR ERVL 12 299 -115 195 69 0 0 chr2 132384524 132384553 -120872030 + (TAGA)n Simple_repeat Simple_repeat 2 30 0 255 125 0 0 chr2 132384566 132384606 -120871977 + (TG)n Simple_repeat Simple_repeat 1 40 0 242 188 0 0 chr2 132384606 132384654 -120871929 + MLT2D LTR ERVL 464 511 -9 211 231 26 51 chr2 132385899 132385977 -120870606 + C-rich Low_complexity Low_complexity 2 77 0 312 129 29 14 chr2 132386424 132386494 -120870089 + (TG)n Simple_repeat Simple_repeat 2 72 0 2120 113 43 0 chr2 132386553 132386853 -120869730 - AluSq SINE Alu 0 313 1 419 292 59 21 chr2 132386953 132387156 -120869427 + MIR SINE MIR 35 245 -17 228 237 17 17 chr2 132387711 132387770 -120868813 - MIR SINE MIR -69 139 81 1796 132 26 0 chr2 132387894 132388204 -120868379 - L1M3 LINE L1 -378 5793 5476 264 256 11 0 chr2 132388940 132389217 -120867366 + (TG)n Simple_repeat Simple_repeat 1 280 0 335 291 10 0 chr2 132389237 132389340 -120867243 + (TG)n Simple_repeat Simple_repeat 1 104 0 387 245 0 0 chr2 132389353 132389516 -120867067 + (TG)n Simple_repeat Simple_repeat 1 163 0 459 220 0 0 chr2 132389587 132389914 -120866669 + (TG)n Simple_repeat Simple_repeat 1 327 0 623 270 111 26 chr2 132389973 132390243 -120866340 - MLT1I LTR MaLR -16 393 101 248 348 67 33 chr2 132390573 132390783 -120865800 + MIR SINE MIR 11 227 -35 319 231 22 33 chr2 132390846 132390937 -120865646 + MIR SINE MIR 60 149 -113 477 219 88 9 chr2 132391899 132392013 -120864570 - MER70B LTR ERVL -102 476 354 1762 154 42 3 chr2 132392117 132392428 -120864155 - MER70A LTR ERVL -149 323 1 1285 272 112 14 chr2 132392787 132392876 -120863707 + L2 LINE L2 1184 1263 -2051 1491 185 77 6 chr2 132392876 132393189 -120863394 - MER58B DNA MER1_type -4 337 3 1285 272 112 14 chr2 132393189 132393610 -120862973 + L2 LINE L2 1263 1744 -1570 2913 154 18 22 chr2 132393631 132394178 -120862405 - LTR10A LTR ERV1 -64 545 1 281 255 75 32 chr2 132394178 132394272 -120862311 + L2 LINE L2 1740 1837 -1477 4691 239 90 45 chr2 132394282 132395969 -120860614 - L1ME2 LINE L1 -2 6231 4621 2243 148 60 45 chr2 132395969 132396290 -120860293 - MSTC LTR MaLR -4 424 94 2317 112 0 3 chr2 132396290 132396595 -120859988 - AluSg SINE Alu -6 304 1 2243 148 60 45 chr2 132396595 132396691 -120859892 - MSTC LTR MaLR -334 94 1 4691 239 90 45 chr2 132396691 132397108 -120859475 - L1ME2 LINE L1 -1612 4621 4224 1998 64 143 0 chr2 132397108 132397373 -120859210 - AluY SINE Alu -8 303 1 4691 239 90 45 chr2 132397373 132397487 -120859096 - L1ME2 LINE L1 -2009 4224 4117 1619 75 45 45 chr2 132397487 132397638 -120858945 - L1MA2 LINE L1 0 6304 6151 2598 44 3 0 chr2 132397638 132397935 -120858648 - AluY SINE Alu -13 298 1 1619 75 45 45 chr2 132397935 132398050 -120858533 - L1MA2 LINE L1 -152 6152 6038 4691 239 90 45 chr2 132398050 132398631 -120857952 - L1ME2 LINE L1 -2116 4117 3323 23089 144 8 15 chr2 132398744 132403881 -120852702 - L1P3 LINE L1 -1290 5171 5 1843 237 93 2 chr2 132403889 132404383 -120852200 + MLT1F1 LTR MaLR 29 567 0 1144 276 126 58 chr2 132404389 132404600 -120851983 - L1ME2 LINE L1 -4124 2272 2077 195 42 0 0 chr2 132404600 132404624 -120851959 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 2044 152 0 3 chr2 132404627 132404929 -120851654 - AluSx SINE Alu -11 301 1 1144 276 126 58 chr2 132404929 132406179 -120850404 - L1ME2 LINE L1 -4320 2076 707 517 233 75 8 chr2 132406382 132406515 -120850068 - MLT1G LTR MaLR 0 590 449 * 626 210 49 0 chr2 132406512 132406655 -120849928 - MLT1G1 LTR MaLR -445 150 1 381 363 48 7 chr2 132406754 132407024 -120849559 - L1ME2 LINE L1 -6024 372 92 306 303 61 0 chr2 132407186 132407285 -120849298 - L2 LINE L2 0 3272 3168 553 310 26 40 chr2 132407290 132407516 -120849067 - MIR SINE MIR -38 224 2 268 220 34 0 chr2 132408825 132408884 -120847699 - MIR SINE MIR -90 118 58 226 236 118 39 chr2 132410102 132410229 -120846354 + MIR SINE MIR 12 148 -114 577 319 70 15 chr2 132410784 132411057 -120845526 + MLT1I LTR MaLR 122 409 0 185 300 0 0 chr2 132411779 132411829 -120844754 + MIR SINE MIR 201 250 -12 186 170 0 64 chr2 132412384 132412431 -120844152 + MIR SINE MIR 219 262 0 300 265 144 0 chr2 132412502 132412634 -120843949 - MIR SINE MIR -41 221 71 2160 129 3 13 chr2 132412637 132412948 -120843635 + AluSx SINE Alu 2 309 -3 906 222 112 84 chr2 132413444 132413925 -120842658 - MLT1G LTR MaLR -106 484 1 679 251 38 62 chr2 132416467 132416758 -120839825 + MER21B LTR ERV1 141 424 -439 2347 120 0 3 chr2 132416915 132417224 -120839359 - AluSx SINE Alu -4 308 1 720 235 81 19 chr2 132417320 132417580 -120839003 - HAL1 LINE L1 -1240 1267 992 1028 120 0 0 chr2 132419577 132419719 -120836864 + AluSg/x SINE Alu 171 312 0 193 368 65 32 chr2 132420094 132420249 -120836334 + L2 LINE L2 2894 3053 -219 376 238 134 63 chr2 132420981 132421422 -120835161 + LTR33 LTR ERVL 35 506 -15 210 279 101 70 chr2 132421990 132422277 -120834306 - L2 LINE L2 -160 3112 2817 323 303 126 40 chr2 132423630 132423828 -120832755 + L1ME LINE L1 858 1072 -5300 1574 194 49 47 chr2 132423843 132424208 -120832375 + L1MC/D LINE L1 4900 5280 -907 2452 83 0 0 chr2 132424208 132424510 -120832073 + AluY SINE Alu 1 302 -9 1574 194 49 47 chr2 132424510 132424676 -120831907 + L1MC/D LINE L1 5280 5444 -743 243 241 114 0 chr2 132425183 132425262 -120831321 - MIR SINE MIR -66 196 109 273 336 50 8 chr2 132426686 132426805 -120829778 - MIR SINE MIR -92 170 47 480 303 123 11 chr2 132427163 132427440 -120829143 - L2 LINE L2 -360 2954 2647 851 265 86 0 chr2 132427736 132427981 -120828602 + HAL1 LINE L1 3 268 -2239 471 271 11 58 chr2 132427988 132428176 -120828407 + MER97c DNA MER1_type? 1 179 -911 2307 189 11 27 chr2 132428510 132429030 -120827553 + MER74A LTR ERVL 1 512 -46 871 163 12 12 chr2 132429248 132429408 -120827175 + MER74A LTR ERVL 385 544 -14 1845 132 35 35 chr2 132429408 132429696 -120826887 - AluSx SINE Alu -14 298 11 1647 194 140 9 chr2 132429927 132430364 -120826219 - LTR54B LTR ERV1 -2 496 3 256 298 81 32 chr2 132431757 132431881 -120824702 - L2 LINE L2 -4 3268 3139 280 183 17 0 chr2 132432762 132432822 -120823761 - MLT1H LTR MaLR 0 549 489 1282 154 6 126 chr2 132434599 132434924 -120821659 - MLT1B LTR MaLR -104 286 1 256 350 14 14 chr2 132435430 132435573 -120821010 + L2 LINE L2 2907 3049 -223 785 256 158 35 chr2 132436109 132436476 -120820107 + LTR16A1 LTR ERVL 12 423 -34 429 275 9 8 chr2 132436478 132436619 -120819964 + L1ME LINE L1 1547 1882 -861 1384 181 10 109 chr2 132436625 132437028 -120819555 + MLT1A1 LTR MaLR 3 365 0 371 253 93 79 chr2 132437389 132437796 -120818787 + L1ME LINE L1 2406 2818 -3564 263 322 11 11 chr2 132438284 132438374 -120818209 - MIR SINE MIR -13 249 160 342 223 77 4 chr2 132438698 132438844 -120817739 - L1ME3 LINE L1 -10 6160 5993 239 148 172 0 chr2 132438873 132438931 -120817652 + MLT1B LTR MaLR 10 64 -310 2977 148 35 11 chr2 132438931 132439451 -120817132 - Tigger3b DNA MER2_type 0 1232 701 4462 130 15 16 chr2 132439482 132440213 -120816370 - L1MA4A LINE L1 -60 6945 6216 4726 178 5 8 chr2 132440214 132441101 -120815482 - L1MA4A LINE L1 -1007 5841 4958 6017 111 23 14 chr2 132441205 132442068 -120814515 + THE1C-int LTR MaLR 710 1580 0 2203 122 26 32 chr2 132442068 132442445 -120814138 + THE1C LTR MaLR 1 375 0 16294 182 23 21 chr2 132442445 132443623 -120812960 - L1MA4A LINE L1 -2464 4384 3210 1908 164 3 0 chr2 132443623 132443934 -120812649 - AluSx SINE Alu 0 312 1 16294 182 23 21 chr2 132443934 132447125 -120809458 - L1MA4A LINE L1 -3638 3210 4 2242 168 99 0 chr2 132447259 132447653 -120808930 - Tigger3b DNA MER2_type -782 449 17 1159 215 18 67 chr2 132447650 132447980 -120808603 + MLT1B LTR MaLR 77 390 0 * 281 264 62 16 chr2 132448729 132448858 -120807725 + MIR3 SINE MIR 22 156 -52 1294 162 63 44 chr2 132449184 132449499 -120807084 - MER44D DNA MER2_type -9 600 10 364 324 89 24 chr2 132449687 132449934 -120806649 - L2 LINE L2 -830 2484 2222 620 306 44 20 chr2 132450631 132450925 -120805658 - L1MC4a LINE L1 -1881 5927 5627 558 243 20 7 chr2 132451139 132451291 -120805292 - LTR16A LTR ERVL -4 446 293 522 239 87 0 chr2 132451400 132451538 -120805045 - LTR16A LTR ERVL -300 150 1 275 259 164 9 chr2 132451746 132451862 -120804721 + MIR SINE MIR 104 237 -25 985 194 11 5 chr2 132452343 132452529 -120804054 + MER5A DNA MER1_type 3 189 0 807 282 109 18 chr2 132454002 132454388 -120802195 + MLT1J2 LTR MaLR 17 437 -13 1584 221 118 94 chr2 132454471 132455189 -120801394 - LTR1B LTR ERV1 -39 981 52 848 296 42 94 chr2 132455422 132455721 -120800862 - MER34 LTR ERV1 -29 513 253 3197 115 60 60 chr2 132455721 132456143 -120800440 + MER4A LTR ERV1 1 425 -175 2376 66 0 3 chr2 132456143 132456447 -120800136 - AluY SINE Alu -8 303 1 3197 115 60 60 chr2 132456447 132456624 -120799959 + MER4A LTR ERV1 424 600 0 848 296 42 94 chr2 132456624 132456865 -120799718 - MER34 LTR ERV1 -289 253 1 245 352 88 0 chr2 132456866 132457025 -120799558 + MIR SINE MIR 86 258 -4 272 322 100 53 chr2 132457583 132457943 -120798640 - L3 LINE CR1 -67 1510 1134 953 192 23 0 chr2 132457953 132458130 -120798453 - L1MC1 LINE L1 0 6333 6153 2250 153 131 12 chr2 132458158 132458570 -120798013 + LOR1b LTR ERV1 1 461 0 981 178 6 0 chr2 132459056 132459225 -120797358 - L1MC1 LINE L1 -176 6157 5988 865 256 45 44 chr2 132459225 132459608 -120796975 - MER39 LTR ERV1 0 653 182 21 0 0 0 chr2 132459648 132459669 -120796914 + AT_rich Low_complexity Low_complexity 1 21 0 1749 235 70 79 chr2 132460086 132460805 -120795778 + MER72 LTR ERV1 1 712 -10 869 221 0 11 chr2 132462325 132462506 -120794077 + MIR SINE MIR 14 192 -70 216 192 101 20 chr2 132463048 132463121 -120793462 + MIR3 SINE MIR 113 194 -14 1539 254 129 4 chr2 132463777 132464288 -120792295 - L1ME1 LINE L1 -2 6164 5590 1978 157 22 40 chr2 132464288 132464658 -120791925 + LTR39 LTR ERV1 1 363 -420 275 178 31 0 chr2 132464666 132464732 -120791851 + AluJ/FLAM SINE Alu 23 69 -233 1654 136 0 8 chr2 132464742 132464999 -120791584 + AluSq SINE Alu 1 255 -58 1987 221 13 2 chr2 132465012 132465405 -120791178 + LTR39 LTR ERV1 351 747 -36 498 229 0 9 chr2 132465411 132465522 -120791061 - L1ME1 LINE L1 -563 5601 5505 2703 259 96 47 chr2 132465546 132466132 -120790451 - L1ME1 LINE L1 -1743 4403 3847 254 73 24 0 chr2 132466132 132466173 -120790410 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 2703 259 96 47 chr2 132466173 132466467 -120790116 - L1ME1 LINE L1 -2299 3847 3569 2318 76 0 13 chr2 132466467 132466771 -120789812 - AluY SINE Alu -11 300 1 2703 259 96 47 chr2 132466771 132466909 -120789674 - L1ME1 LINE L1 -2577 3569 3439 2439 205 26 55 chr2 132466909 132467564 -120789019 + MER92B LTR ERV1 1 636 0 2703 259 96 47 chr2 132467564 132468100 -120788483 - L1ME1 LINE L1 -2707 3439 2678 2064 241 35 31 chr2 132468104 132468615 -120787968 + LTR40a LTR ERVL 7 519 0 455 290 21 16 chr2 132468617 132468803 -120787780 - L1ME1 LINE L1 -3465 2681 2495 526 202 39 47 chr2 132468804 132468837 -120787746 - FLAM_A SINE Alu -170 141 109 2119 117 5 61 chr2 132468837 132469213 -120787370 + THE1A LTR MaLR 1 355 0 526 202 39 47 chr2 132469213 132469308 -120787275 - FLAM_A SINE Alu -202 109 14 730 194 56 10 chr2 132469370 132469566 -120787017 - L1ME1 LINE L1 -3705 2441 2237 1297 289 93 65 chr2 132469652 132470915 -120785668 + L1M4 LINE L1 3 1301 -5241 6530 83 6 14 chr2 132470920 132471786 -120784797 + L1P3 LINE L1 2 860 -5601 2326 151 96 2 chr2 132471789 132472239 -120784344 + L1MB4 LINE L1 5677 6168 -12 6408 80 8 26 chr2 132472278 132473497 -120783086 - L1PA8A LINE L1 -3 6128 4913 233 273 45 83 chr2 132473628 132473760 -120782823 - MLT1K LTR MaLR -8 580 454 394 297 43 8 chr2 132474189 132474361 -120782222 + MIR SINE MIR 10 189 -65 409 243 66 32 chr2 132475257 132475411 -120781172 + MIR SINE MIR 94 256 -6 297 133 43 101 chr2 132476111 132476235 -120780348 + MLT1H LTR MaLR 282 548 -1 1670 177 72 4 chr2 132476916 132477370 -120779213 - L1MB3 LINE L1 -10 6173 5646 491 316 110 5 chr2 132477515 132477724 -120778859 - MIR SINE MIR 0 262 32 1568 174 192 13 chr2 132479152 132479247 -120777336 + LOR1b LTR ERV1 1 78 -383 1983 91 11 0 chr2 132479247 132479521 -120777062 + AluSx SINE Alu 25 301 -11 1568 174 192 13 chr2 132479521 132479816 -120776767 + LOR1b LTR ERV1 78 461 0 319 348 19 19 chr2 132482715 132482873 -120773710 + MLT1J2 LTR MaLR 282 439 -11 1061 243 135 25 chr2 132484217 132484625 -120771958 - MLT1J LTR MaLR -58 453 1 498 282 115 50 chr2 132484681 132485163 -120771420 + L2 LINE L2 2782 3307 -6 266 326 82 0 chr2 132485641 132485788 -120770795 + MIR3 SINE MIR 34 192 -16 183 80 0 0 chr2 132486243 132486268 -120770315 + (GA)n Simple_repeat Simple_repeat 2 26 0 374 237 36 57 chr2 132486498 132486692 -120769891 + L1MD1 LINE L1 3426 3615 -2531 1647 255 91 6 chr2 132486716 132487245 -120769338 + L1MD1 LINE L1 3829 4402 -1744 1517 233 111 14 chr2 132487324 132487766 -120768817 - MLT1E2 LTR MaLR -4 622 138 782 205 27 123 chr2 132487937 132488230 -120768353 - MLT1E2-int LTR MaLR 0 1371 1107 3768 189 58 17 chr2 132488274 132489175 -120767408 + L1MD1 LINE L1 5127 6076 -166 2368 173 84 11 chr2 132489175 132489362 -120767221 + LTR44 LTR ERV1 1 173 -346 1314 111 62 37 chr2 132489362 132489487 -120767096 - L1PA16 LINE L1 -6 6160 6040 331 38 38 0 chr2 132489487 132489540 -120767043 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 2267 103 0 0 chr2 132489540 132489822 -120766761 - AluSx SINE Alu -30 282 1 1314 111 62 37 chr2 132489822 132489938 -120766645 - L1PA16 LINE L1 -125 6041 5912 2368 173 84 11 chr2 132489938 132490224 -120766359 + LTR44 LTR ERV1 173 509 -10 595 143 150 0 chr2 132490224 132490357 -120766226 + L1MD1 LINE L1 6082 6234 -8 2022 271 72 78 chr2 132490358 132491561 -120765022 + MLT1J2-int LTR MaLR 43 1238 -133 1410 195 44 30 chr2 132491561 132491858 -120764725 - AluJb SINE Alu -11 301 1 704 186 0 0 chr2 132491859 132491983 -120764600 - AluJo SINE Alu -178 134 11 431 262 24 8 chr2 132492043 132492169 -120764414 + MLT1J2-int LTR MaLR 1244 1371 0 290 225 50 15 chr2 132492169 132492376 -120764207 + MLT1E2 LTR MaLR 1 223 -401 1832 202 75 83 chr2 132492397 132492500 -120764083 - L1MDb LINE L1 -2829 3711 3609 1827 146 22 0 chr2 132492500 132492775 -120763808 + AluSx SINE Alu 9 289 -23 1832 202 75 83 chr2 132492775 132493285 -120763298 - L1MDb LINE L1 -2931 3609 3096 2102 134 0 13 chr2 132493285 132493592 -120762991 + AluSx SINE Alu 1 303 -9 2039 132 14 0 chr2 132493602 132493889 -120762694 + AluSx SINE Alu 9 302 -10 255 93 0 0 chr2 132493889 132493932 -120762651 + (CA)n Simple_repeat Simple_repeat 2 44 0 1832 202 75 83 chr2 132493939 132494056 -120762527 - L1MDb LINE L1 -3453 3087 2975 1613 220 3 13 chr2 132494032 132494419 -120762164 - L1MDb LINE L1 -5127 1416 1034 * 1028 208 98 100 chr2 132494878 132495436 -120761147 - MER34B LTR ERV1 0 542 9 807 269 132 32 chr2 132495443 132495942 -120760641 - L1MDb LINE L1 -5980 560 12 1796 81 4 8 chr2 132495948 132496182 -120760401 - AluSc SINE Alu -12 297 65 289 87 43 22 chr2 132496194 132496240 -120760343 - MLT1E3-int LTR MaLR -1324 47 1 1679 200 90 49 chr2 132496240 132496706 -120759877 - MLT1E3 LTR MaLR 0 624 140 397 288 130 0 chr2 132496813 132496959 -120759624 - MER63 DNA MER1_type -42 1646 4 2261 247 33 33 chr2 132496962 132497655 -120758928 + L1ME3A LINE L1 4418 5110 -1036 2273 93 7 0 chr2 132497655 132497945 -120758638 + AluSg SINE Alu 1 292 -18 2278 49 3 14 chr2 132497947 132498278 -120758305 + AluY SINE Alu 1 328 0 2261 247 33 33 chr2 132498278 132498365 -120758218 + L1ME3A LINE L1 5110 5202 -944 225 0 0 0 chr2 132498370 132498395 -120758188 + (A)n Simple_repeat Simple_repeat 1 25 0 2972 168 24 0 chr2 132498395 132498908 -120757675 - MER34 LTR ERV1 -8 534 9 1007 207 52 38 chr2 132498908 132499296 -120757287 + L1ME3A LINE L1 5202 5638 -526 2323 104 0 0 chr2 132499334 132499632 -120756951 + AluSx SINE Alu 1 298 -14 1668 163 45 30 chr2 132499683 132500014 -120756569 + LTR39 LTR ERV1 1 336 -447 2698 174 0 18 chr2 132500161 132500666 -120755917 - LTR60 LTR ERV1 -90 496 1 2388 193 37 2 chr2 132500666 132501096 -120755487 + LTR39 LTR ERV1 331 775 -8 250 0 0 0 chr2 132501091 132501118 -120755465 - LTR60 LTR ERV1 -393 193 167 * 1651 112 28 48 chr2 132501136 132501387 -120755196 + AluSx SINE Alu 1 246 -66 5146 70 15 11 chr2 132501387 132501475 -120755108 + PABL_A LTR ERV1 1 87 -573 2102 92 0 0 chr2 132501475 132501759 -120754824 + L1PA8 LINE L1 5887 6170 -2 5146 70 15 11 chr2 132501759 132502327 -120754256 + PABL_A LTR ERV1 87 660 0 379 100 17 0 chr2 132502327 132502387 -120754196 + AluSp/q SINE Alu 243 303 0 668 237 53 0 chr2 132502389 132502579 -120754004 + L1ME3A LINE L1 5754 5953 -217 270 0 0 0 chr2 132502775 132502805 -120753778 + (TG)n Simple_repeat Simple_repeat 2 31 0 260 266 28 28 chr2 132502949 132503058 -120753525 + L1M4 LINE L1 5122 5230 -916 222 105 0 0 chr2 132503290 132503328 -120753255 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 192 308 77 39 chr2 132504011 132504115 -120752468 - L2 LINE L2 -11 3261 3154 266 244 0 13 chr2 132504174 132504252 -120752331 + L1M4 LINE L1 4433 4509 -1637 1537 191 101 34 chr2 132504344 132504732 -120751851 - MLT2D LTR ERVL 0 414 1 801 183 0 0 chr2 132504758 132504889 -120751694 + FLAM_C SINE Alu 1 131 -2 1106 220 63 8 chr2 132504910 132505178 -120751405 - MLT1C LTR MaLR -76 391 109 1737 136 20 48 chr2 132505207 132505468 -120751115 + Tigger3(Golem) DNA MER2_type 1 255 -976 2243 95 3 0 chr2 132505468 132505753 -120750830 + AluSq SINE Alu 21 306 -7 1737 136 20 48 chr2 132505753 132505785 -120750798 + Tigger3(Golem) DNA MER2_type 255 286 -945 736 262 101 86 chr2 132505869 132506610 -120749973 + L1M4 LINE L1 3863 4614 -1532 253 253 11 11 chr2 132507198 132507289 -120749294 + L1M4 LINE L1 4622 4712 -1434 550 222 12 42 chr2 132507557 132507579 -120749004 + L1M4 LINE L1 2376 2397 -3749 2350 125 23 10 chr2 132507579 132507964 -120748619 + MLT1B LTR MaLR 1 390 0 550 222 12 42 chr2 132507964 132508108 -120748475 + L1M4 LINE L1 2397 2537 -3609 740 103 0 0 chr2 132508115 132508212 -120748371 - AluSx SINE Alu -22 290 194 1118 106 0 0 chr2 132508213 132508354 -120748229 - AluSx SINE Alu -172 141 1 371 224 20 0 chr2 132508356 132508454 -120748129 + L1M4 LINE L1 2534 2633 -3513 1129 181 24 5 chr2 132508461 132508666 -120747917 - MER20 DNA MER1_type -4 215 7 458 206 168 26 chr2 132508702 132508857 -120747726 + L1M4 LINE L1 2678 2854 -3292 2897 235 147 16 chr2 132508864 132509222 -120747361 + L1M4 LINE L1 2936 3246 -2900 4167 143 77 37 chr2 132509222 132509975 -120746608 + LTR39 LTR ERV1 1 783 0 2897 235 147 16 chr2 132509975 132510480 -120746103 + L1M4 LINE L1 3246 3683 -2463 2495 72 3 0 chr2 132510480 132510785 -120745798 - AluY SINE Alu -5 306 1 2897 235 147 16 chr2 132510785 132511144 -120745439 + L1M4 LINE L1 3683 4320 -1826 728 234 6 0 chr2 132511177 132511196 -120745387 - L1MA10 LINE L1 -1 6333 6315 1767 213 80 19 chr2 132511196 132511671 -120744912 - L1ME1 LINE L1 -11 6155 5652 252 240 0 31 chr2 132511659 132511755 -120744828 + L1M4 LINE L1 4323 4415 -1731 * 224 261 0 31 chr2 132512067 132512132 -120744451 + GA-rich Low_complexity Low_complexity 2 64 0 426 162 0 0 chr2 132512253 132512327 -120744256 - L1MB2 LINE L1 -2 6169 6096 2405 148 10 22 chr2 132512327 132512595 -120743988 - L1MB2 LINE L1 -445 5738 5475 691 50 10 10 chr2 132512595 132512696 -120743887 + (TAGA)n Simple_repeat Simple_repeat 3 103 0 2405 148 10 22 chr2 132512696 132512839 -120743744 - L1MB2 LINE L1 -708 5475 5332 242 67 0 0 chr2 132512848 132512878 -120743705 - L1MB2 LINE L1 -819 5361 5332 699 126 76 8 chr2 132512879 132512998 -120743585 - MLT1A2 LTR MaLR -1 373 247 5015 246 37 87 chr2 132513006 132515235 -120741348 - L1MB2 LINE L1 -810 5336 3218 463 162 9 185 chr2 132515981 132516203 -120740380 + LTR38B LTR ERV1 1 183 -427 655 171 18 0 chr2 132516820 132516931 -120739652 - MER81 DNA DNA 0 114 2 336 281 175 0 chr2 132517225 132517396 -120739187 - MIR SINE MIR -34 228 28 290 224 0 7 chr2 132517543 132517686 -120738897 + GA-rich Low_complexity Low_complexity 1 142 0 990 156 0 0 chr2 132517782 132517923 -120738660 + AluJb SINE Alu 128 268 -44 417 123 0 0 chr2 132517950 132518007 -120738576 + MER34 LTR ERV1 12 68 -474 641 96 0 0 chr2 132518013 132518096 -120738487 + AluSg SINE Alu 8 90 -220 405 288 56 19 chr2 132519212 132519372 -120737211 + MIR SINE MIR 78 243 -19 401 304 0 8 chr2 132519555 132519680 -120736903 - MER117 DNA MER1_type -69 128 5 259 250 44 44 chr2 132520036 132520172 -120736411 + LTR16C LTR ERVL 313 448 -43 828 197 33 86 chr2 132521243 132521547 -120735036 + MER96B DNA MER1_type? 130 417 0 306 135 39 0 chr2 132521771 132521823 -120734760 + U7 snRNA snRNA 10 63 0 1723 213 35 14 chr2 132521993 132522360 -120734223 - LTR39 LTR ERV1 0 783 409 366 0 0 0 chr2 132522360 132522402 -120734181 + L1P3 LINE L1 5647 5688 -466 1661 39 0 15 chr2 132522415 132522620 -120733963 + L1PA8 LINE L1 5963 6164 -8 1815 196 48 41 chr2 132522625 132523044 -120733539 - LTR39 LTR ERV1 -361 422 1 351 242 20 30 chr2 132523425 132523524 -120733059 - MIR SINE MIR -112 150 53 278 287 105 58 chr2 132524027 132524161 -120732422 - L2 LINE L2 -724 2590 2464 2358 81 14 0 chr2 132524161 132524457 -120732126 + AluSp SINE Alu 1 300 -13 278 287 105 58 chr2 132524457 132524684 -120731899 - L2 LINE L2 -850 2464 2212 1972 120 65 0 chr2 132526012 132526288 -120730295 - AluSq SINE Alu -19 294 1 540 198 160 59 chr2 132526312 132526499 -120730084 - MER3 DNA MER1_type -3 206 1 308 253 40 6 chr2 132526545 132526701 -120729882 - L1MC4a LINE L1 -312 7496 7315 2156 137 0 7 chr2 132526854 132527160 -120729423 - AluSx SINE Alu -8 304 1 796 268 157 58 chr2 132527623 132527831 -120728752 + L1MC4 LINE L1 5753 5939 -1954 1943 176 28 16 chr2 132527831 132528195 -120728388 - MLT1A2 LTR MaLR -4 370 3 796 268 157 58 chr2 132528195 132528995 -120727588 + L1MC4 LINE L1 5939 6948 -945 324 230 97 133 chr2 132530523 132530669 -120725914 - MER5C DNA MER1_type 0 324 174 2177 98 20 3 chr2 132530669 132530964 -120725619 - AluSx SINE Alu -10 302 3 324 230 97 133 chr2 132530964 132531015 -120725568 - MER5C DNA MER1_type -150 174 123 249 57 0 0 chr2 132531015 132531050 -120725533 + (CAGG)n Simple_repeat Simple_repeat 2 36 0 324 230 97 133 chr2 132531050 132531160 -120725423 - MER5C DNA MER1_type -201 123 27 489 283 130 5 chr2 132531326 132531677 -120724906 - L1 LINE L1 -1098 5048 4639 281 98 0 20 chr2 132531689 132531740 -120724843 + (CA)n Simple_repeat Simple_repeat 2 51 0 1545 233 102 74 chr2 132531744 132532007 -120724576 + L1MC5 LINE L1 6876 7130 -831 780 158 0 0 chr2 132532007 132532127 -120724456 - FLAM_A SINE Alu -9 124 5 1545 233 102 74 chr2 132532127 132532904 -120723679 + L1MC5 LINE L1 7130 7926 -35 4004 70 2 6 chr2 132532936 132533453 -120723130 - L1PA8 LINE L1 -1 6171 5657 406 372 39 12 chr2 132533456 132533703 -120722880 + L1ME LINE L1 5197 5449 -754 292 274 21 11 chr2 132533721 132533816 -120722767 + L1ME LINE L1 5510 5605 -516 2478 160 146 126 chr2 132533827 132534142 -120722441 + L1MC3 LINE L1 6759 7066 -719 227 318 9 28 chr2 132534142 132534249 -120722334 + MLT1F1 LTR MaLR 21 125 -442 2478 160 146 126 chr2 132534249 132534664 -120721919 + L1MC3 LINE L1 7066 7622 -163 1775 182 0 0 chr2 132534664 132534960 -120721623 + AluJb SINE Alu 1 296 -16 2478 160 146 126 chr2 132534960 132535126 -120721457 + L1MC3 LINE L1 7622 7783 -2 336 264 111 0 chr2 132535123 132535267 -120721316 + L1ME LINE L1 5603 5762 -359 * 21 0 0 0 chr2 132535725 132535746 -120720837 + AT_rich Low_complexity Low_complexity 1 21 0 1984 74 0 19 chr2 132535746 132536003 -120720580 - AluY SINE Alu -59 252 1 444 208 19 0 chr2 132536612 132536718 -120719865 + LTR37A LTR ERV1 319 426 0 3437 119 67 2 chr2 132538596 132539091 -120717492 + MER1A DNA MER1_type 1 527 0 450 300 108 65 chr2 132539996 132540720 -120715863 + LTR49-int LTR ERV1 4641 5395 -936 2103 132 0 0 chr2 132540792 132541087 -120715496 + AluSx SINE Alu 1 295 -17 294 207 97 69 chr2 132541491 132541596 -120714987 + LTR37A LTR ERV1 278 379 -47 192 77 0 0 chr2 132541596 132541622 -120714961 + (TATATG)n Simple_repeat Simple_repeat 3 28 0 2024 144 0 0 chr2 132541623 132541914 -120714669 - AluSx SINE Alu -21 291 1 294 207 97 69 chr2 132541914 132541951 -120714632 + LTR37A LTR ERV1 378 426 0 226 297 84 32 chr2 132541955 132542110 -120714473 - MIR SINE MIR -75 187 25 193 333 17 0 chr2 132543167 132543227 -120713356 + L3 LINE CR1 455 515 -1062 947 179 6 17 chr2 132543240 132543419 -120713164 + FRAM SINE Alu 1 171 -5 192 219 24 0 chr2 132543530 132543571 -120713012 - MIR3 SINE MIR -45 163 122 2324 98 0 0 chr2 132543571 132543867 -120712716 + AluSx SINE Alu 1 296 -16 240 342 9 53 chr2 132544043 132544157 -120712426 + L3 LINE CR1 778 886 -691 317 289 142 40 chr2 132545024 132545157 -120711426 - MLT1L LTR MaLR -167 448 330 2299 106 0 0 chr2 132545157 132545469 -120711114 - AluSx SINE Alu 0 312 1 317 289 142 40 chr2 132545469 132545560 -120711023 - MLT1L LTR MaLR -285 330 201 304 200 0 0 chr2 132545527 132545587 -120710996 - MLT1J LTR MaLR -342 169 110 * 232 254 70 0 chr2 132545587 132545598 -120710985 - LTR67 LTR ERVL -383 174 99 241 289 33 22 chr2 132545603 132545693 -120710890 - MLT1L LTR MaLR -524 91 1 2027 87 31 0 chr2 132546623 132546909 -120709674 - AluSx SINE Alu 0 312 18 2157 98 0 55 chr2 132546917 132547244 -120709339 - AluSx SINE Alu -3 309 1 912 202 33 0 chr2 132547603 132547786 -120708797 - L1PA16 LINE L1 0 6166 5978 363 314 19 0 chr2 132548141 132548300 -120708283 + (CTCA)n Simple_repeat Simple_repeat 4 165 0 * 524 269 0 6 chr2 132548197 132548601 -120707982 + (CA)n Simple_repeat Simple_repeat 1 401 0 266 257 9 0 chr2 132548633 132548988 -120707595 + (CA)n Simple_repeat Simple_repeat 1 358 0 540 293 0 6 chr2 132549030 132549211 -120707372 + (CA)n Simple_repeat Simple_repeat 1 180 0 243 0 0 0 chr2 132549466 132549493 -120707090 + (CA)n Simple_repeat Simple_repeat 2 28 0 226 240 0 0 chr2 132551257 132551307 -120705276 + GA-rich Low_complexity Low_complexity 4 53 0 313 337 169 6 chr2 132551765 132551909 -120704674 + MIR SINE MIR 32 210 -52 2104 127 3 0 chr2 132551909 132552217 -120704366 + AluSq SINE Alu 3 311 -2 313 337 169 6 chr2 132552217 132552244 -120704339 + MIR SINE MIR 210 231 -31 253 218 12 91 chr2 132554533 132554729 -120701854 + GA-rich Low_complexity Low_complexity 1 180 0 195 288 15 45 chr2 132555129 132555195 -120701388 + MIR SINE MIR 72 135 -127 487 284 147 25 chr2 132556244 132556448 -120700135 + MIR SINE MIR 24 252 -10 260 235 108 12 chr2 132557230 132557325 -120699258 + MIR SINE MIR 41 144 -64 181 179 18 18 chr2 132558548 132558604 -120697979 + (CA)n Simple_repeat Simple_repeat 2 57 0 191 298 24 60 chr2 132559076 132559160 -120697423 + MER5A DNA MER1_type 10 90 -99 239 197 33 16 chr2 132562280 132562341 -120694242 + GA-rich Low_complexity Low_complexity 1 62 0 342 366 79 0 chr2 132562583 132562747 -120693836 + MIR SINE MIR 65 241 -21 231 36 0 0 chr2 132563708 132563736 -120692847 + (TG)n Simple_repeat Simple_repeat 1 28 0 668 225 6 35 chr2 132564343 132564516 -120692067 - MER3 DNA MER1_type -2 207 40 1845 166 7 0 chr2 132571284 132571592 -120684991 + AluJb SINE Alu 1 310 -2 201 278 124 56 chr2 132572130 132572288 -120684295 + MIR3 SINE MIR 13 191 -62 306 0 0 0 chr2 132574226 132574260 -120682323 + (CA)n Simple_repeat Simple_repeat 2 35 0 355 244 33 11 chr2 132574691 132574781 -120681802 + MIR SINE MIR 105 196 -66 357 288 102 34 chr2 132576217 132576335 -120680248 + MIR SINE MIR 25 150 -112 2209 109 0 3 chr2 132579187 132579491 -120677092 - AluSg SINE Alu -7 303 1 396 264 70 8 chr2 132579611 132579740 -120676843 + MIR SINE MIR 38 174 -88 330 198 35 86 chr2 132579860 132579976 -120676607 - MIR3 SINE MIR -22 186 77 189 0 0 0 chr2 132580859 132580880 -120675703 + (CCCCCT)n Simple_repeat Simple_repeat 2 22 0 206 32 32 0 chr2 132581806 132581837 -120674746 + (CA)n Simple_repeat Simple_repeat 1 32 0 212 346 12 0 chr2 132582826 132582907 -120673676 - L2 LINE L2 -172 3100 3019 282 254 246 0 chr2 132583760 132583874 -120672709 + MIR SINE MIR 109 250 -12 288 345 139 32 chr2 132584012 132584264 -120672319 + L2 LINE L2 2978 3256 -16 218 309 124 0 chr2 132584413 132584510 -120672073 + MIR SINE MIR 46 154 -108 206 160 80 0 chr2 132586476 132586526 -120670057 + (CAGG)n Simple_repeat Simple_repeat 1 54 0 749 273 39 106 chr2 132587447 132587570 -120669013 - L1MC4 LINE L1 -3 8039 7909 1521 184 53 10 chr2 132587570 132587869 -120668714 - AluJo SINE Alu 0 312 1 749 273 39 106 chr2 132587869 132588407 -120668176 - L1MC4 LINE L1 -133 7909 7422 219 283 0 0 chr2 132588665 132588718 -120667865 + MER5A DNA MER1_type 137 189 0 813 194 126 0 chr2 132588852 132589043 -120667540 - L1MC4 LINE L1 -1030 7012 6798 180 237 17 51 chr2 132590587 132590646 -120665937 + L2 LINE L2 1360 1416 -1898 * 269 272 212 20 chr2 132590596 132590739 -120665844 - MIR SINE MIR -63 145 22 2295 103 0 0 chr2 132590976 132591278 -120665305 - AluSg SINE Alu -6 304 3 313 302 105 57 chr2 132592768 132592928 -120663655 - L2 LINE L2 -11 3261 3110 1666 192 0 10 chr2 132592928 132593236 -120663347 + AluJo SINE Alu 1 305 -7 313 302 105 57 chr2 132593236 132593476 -120663107 - L2 LINE L2 -162 3110 2842 195 319 0 66 chr2 132593486 132593577 -120663006 - MIR SINE MIR -28 234 150 277 343 101 20 chr2 132593839 132594037 -120662546 - L2 LINE L2 -508 2806 2593 234 299 26 0 chr2 132594040 132594117 -120662466 - L2 LINE L2 -865 2449 2371 214 326 101 14 chr2 132594369 132594507 -120662076 + MIR SINE MIR 80 229 -33 204 224 12 94 chr2 132595482 132595567 -120661016 + L2 LINE L2 3024 3101 -171 1902 134 13 36 chr2 132596204 132596511 -120660072 + AluJo SINE Alu 1 300 -12 251 311 12 19 chr2 132596586 132596747 -120659836 + (CCCCAG)n Simple_repeat Simple_repeat 1 160 0 197 235 118 0 chr2 132596922 132597007 -120659576 + MIR SINE MIR 25 119 -89 1676 217 70 11 chr2 132597771 132598400 -120658183 + MER39 LTR ERV1 1 706 -1 530 294 67 21 chr2 132598672 132598866 -120657717 - MIR SINE MIR -59 203 1 189 259 59 59 chr2 132600306 132600391 -120656192 + MIR SINE MIR 106 190 -72 192 314 147 41 chr2 132602393 132602638 -120653945 + L2 LINE L2 2870 3140 -132 201 74 0 0 chr2 132603819 132603846 -120652737 + (TG)n Simple_repeat Simple_repeat 1 27 0 2307 70 0 0 chr2 132603974 132604285 -120652298 - AluSc SINE Alu 0 309 1 2240 68 3 7 chr2 132604285 132604578 -120652005 - AluSx SINE Alu -20 292 1 195 282 47 35 chr2 132604982 132605067 -120651516 + MIR SINE MIR 92 177 -85 294 286 86 17 chr2 132605365 132605509 -120651074 - MIR SINE MIR -41 167 40 567 243 62 7 chr2 132605981 132606125 -120650458 + L2 LINE L2 3161 3312 -1 344 310 142 7 chr2 132606467 132606622 -120649961 - MIR SINE MIR -6 256 81 217 312 86 48 chr2 132607562 132607748 -120648835 + MIR SINE MIR 35 227 -35 240 376 112 0 chr2 132609164 132609342 -120647241 - L2 LINE L2 -2 3270 3073 324 0 0 0 chr2 132610431 132610467 -120646116 + (TCC)n Simple_repeat Simple_repeat 3 38 0 195 114 0 0 chr2 132612064 132612099 -120644484 + (CGAG)n Simple_repeat Simple_repeat 1 35 0 23 33 0 0 chr2 132612140 132612170 -120644413 + GC_rich Low_complexity Low_complexity 1 30 0 362 246 149 18 chr2 132612686 132612800 -120643783 - MIR SINE MIR 0 262 134 198 344 73 0 chr2 132613234 132613330 -120643253 - MIR3 SINE MIR -24 184 82 1141 194 86 40 chr2 132613458 132613655 -120642928 + MER2 DNA MER2_type 6 192 -153 212 0 36 0 chr2 132613655 132613683 -120642900 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 2190 83 0 0 chr2 132613685 132613963 -120642620 - AluSc SINE Alu -31 278 1 1141 194 86 40 chr2 132613963 132614087 -120642496 + MER2 DNA MER2_type 192 345 0 403 383 28 6 chr2 132614527 132614707 -120641876 + L1ME4a LINE L1 5725 5908 -213 29 0 0 0 chr2 132614710 132614739 -120641844 + AT_rich Low_complexity Low_complexity 1 29 0 2152 87 4 0 chr2 132614863 132615139 -120641444 + AluSp SINE Alu 21 297 -16 370 287 85 43 chr2 132615287 132615451 -120641132 + L1ME4a LINE L1 5950 6120 -1 491 320 125 54 chr2 132615523 132615820 -120640763 + L1ME4a LINE L1 5268 5585 -2223 280 280 104 37 chr2 132615834 132616102 -120640481 + L1ME4a LINE L1 5602 5887 -234 263 237 119 8 chr2 132616118 132616236 -120640347 + L1ME4a LINE L1 5989 6119 -2 5664 137 28 11 chr2 132616406 132616418 -120640165 - L1MC1 LINE L1 -1 6332 6322 1700 82 0 0 chr2 132616418 132616638 -120639945 - AluSq SINE Alu -7 306 87 5664 137 28 11 chr2 132616638 132617514 -120639069 - L1MC1 LINE L1 -11 6322 5429 1859 160 20 7 chr2 132618115 132618421 -120638162 + AluJb SINE Alu 1 310 -2 241 291 200 6 chr2 132618426 132618591 -120637992 + MIR SINE MIR 62 258 -4 629 257 68 44 chr2 132618810 132619106 -120637477 + MLT1K LTR MaLR 286 588 0 1935 168 0 0 chr2 132619123 132619433 -120637150 - AluSx SINE Alu -2 310 1 362 208 73 0 chr2 132619558 132619654 -120636929 + MER94 DNA DNA 23 125 -9 2207 122 0 3 chr2 132620041 132620353 -120636230 + AluSx SINE Alu 1 311 -1 2460 196 14 2 chr2 132621215 132621644 -120634939 + Tigger2a DNA MER2_type 1 434 0 749 246 46 29 chr2 132621668 132621693 -120634890 + L1ME LINE L1 5127 5150 -1012 2520 33 0 58 chr2 132621693 132622023 -120634560 - AluY SINE Alu 0 311 1 749 246 46 29 chr2 132622023 132622394 -120634189 + L1ME LINE L1 5150 5529 -633 269 265 19 86 chr2 132622701 132622863 -120633720 + L2 LINE L2 2962 3112 -160 199 301 97 0 chr2 132623115 132623208 -120633375 + L2 LINE L2 3154 3255 -17 6443 73 22 65 chr2 132623849 132625448 -120631135 - SVA Other Other -518 1386 393 230 287 30 30 chr2 132626509 132626610 -120629973 - L2 LINE L2 -54 3259 3159 1627 120 23 108 chr2 132627880 132628222 -120628361 - AluYb8 SINE Alu -5 313 1 3700 217 26 53 chr2 132628253 132628447 -120628136 - L1MD1 LINE L1 -12 6230 6032 5097 56 21 30 chr2 132628447 132628531 -120628052 - PABL_A LTR ERV1 -2 658 575 1953 103 0 4 chr2 132628531 132628804 -120627779 - AluY SINE Alu -5 306 35 5097 56 21 30 chr2 132628804 132628904 -120627679 - PABL_A LTR ERV1 -85 575 476 2130 129 3 0 chr2 132628904 132629206 -120627377 - AluSq SINE Alu -10 303 1 5097 56 21 30 chr2 132629206 132629684 -120626899 - PABL_A LTR ERV1 -184 476 1 3700 217 26 53 chr2 132629684 132629830 -120626753 - L1MD1 LINE L1 -210 6032 5884 2185 109 0 0 chr2 132629830 132630123 -120626460 + AluSx SINE Alu 1 293 -19 1884 167 0 7 chr2 132630131 132630431 -120626152 + AluJo SINE Alu 1 298 -14 3700 217 26 53 chr2 132630431 132631682 -120624901 - L1MD1 LINE L1 -365 5877 4674 1246 284 66 50 chr2 132631824 132632430 -120624153 + MER21B LTR ERV1 141 756 -107 22 35 0 0 chr2 132632494 132632523 -120624060 + AT_rich Low_complexity Low_complexity 1 29 0 1521 242 51 6 chr2 132632524 132633185 -120623398 - L1MD1 LINE L1 -1493 4653 3697 284 350 84 10 chr2 132633241 132633444 -120623139 - MLT1L LTR MaLR -38 577 360 269 286 14 0 chr2 132633548 132633618 -120622965 - MLT1J LTR MaLR -331 180 110 594 294 40 96 chr2 132634122 132634225 -120622358 - L1MC4 LINE L1 -15 8027 7920 31 0 0 0 chr2 132634225 132634256 -120622327 + AT_rich Low_complexity Low_complexity 1 31 0 594 294 40 96 chr2 132634256 132634312 -120622271 - L1MC4 LINE L1 -122 7920 7862 1964 144 0 3 chr2 132634312 132634596 -120621987 + AluSx SINE Alu 1 283 -29 229 35 0 0 chr2 132634596 132634625 -120621958 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 594 294 40 96 chr2 132634625 132635615 -120620968 - L1MC4 LINE L1 -180 7862 6827 267 103 0 0 chr2 132635691 132635730 -120620853 + (TA)n Simple_repeat Simple_repeat 1 39 0 1571 207 24 3 chr2 132635733 132636067 -120620516 - MLT2C1 LTR ERVL -56 341 1 1469 171 81 22 chr2 132636107 132636437 -120620146 + MLT1A1 LTR MaLR 4 421 -7 523 312 112 48 chr2 132636442 132636711 -120619872 - L1MC4a LINE L1 -1213 6595 6310 23 0 0 0 chr2 132637150 132637173 -120619410 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 132637179 132637200 -120619383 + AT_rich Low_complexity Low_complexity 1 21 0 333 0 0 0 chr2 132637390 132637427 -120619156 + (T)n Simple_repeat Simple_repeat 1 37 0 2353 55 41 3 chr2 132637552 132637844 -120618739 + AluY SINE Alu 1 303 -8 410 250 86 119 chr2 132638530 132638634 -120617949 + MLT1L LTR MaLR 99 205 -410 1934 167 0 22 chr2 132638634 132638952 -120617631 - AluJb SINE Alu 0 312 2 410 250 86 119 chr2 132638952 132639090 -120617493 + MLT1L LTR MaLR 205 416 -199 294 156 0 0 chr2 132639577 132639641 -120616942 + GA-rich Low_complexity Low_complexity 2 65 0 452 258 77 26 chr2 132640434 132640589 -120615994 - MIR SINE MIR -18 244 82 706 238 43 5 chr2 132640699 132640909 -120615674 + Charlie8 DNA MER1_type 48 265 -2152 183 245 10 98 chr2 132641574 132641676 -120614907 - L2 LINE L2 -2797 517 425 302 263 86 50 chr2 132643748 132643946 -120612637 - L1M4 LINE L1 -1783 4432 4228 843 101 0 0 chr2 132644078 132644207 -120612376 + L1P LINE L1 4646 4774 -1372 638 310 105 28 chr2 132644211 132644621 -120611962 - L1MEc LINE L1 -3655 2560 2143 422 281 163 49 chr2 132644878 132645468 -120611115 - HAL1 LINE L1 -738 1769 1113 343 280 26 42 chr2 132646312 132646452 -120610131 - MIR SINE MIR -61 147 45 233 266 115 62 chr2 132646636 132646749 -120609834 - L2 LINE L2 -1 3271 3153 516 224 37 30 chr2 132646751 132646885 -120609698 - MIR SINE MIR -55 153 19 805 147 0 0 chr2 132646907 132647036 -120609547 - L1MA6 LINE L1 0 6300 6172 442 275 54 0 chr2 132647041 132647208 -120609375 - L1ME4a LINE L1 -2 6119 5944 315 297 90 14 chr2 132647650 132647795 -120608788 - L1ME4a LINE L1 -254 5867 5712 247 246 58 0 chr2 132647841 132647910 -120608673 + MIR SINE MIR 77 149 -113 1607 154 88 0 chr2 132648446 132648719 -120607864 + AluJo SINE Alu 1 297 -15 274 254 201 30 chr2 132649027 132649161 -120607422 - MIR SINE MIR 0 262 106 213 265 122 51 chr2 132649429 132649527 -120607056 - L2 LINE L2 0 3272 3168 260 242 0 0 chr2 132649550 132649612 -120606971 - HAL1 LINE L1 -932 1575 1514 807 159 149 10 chr2 132649620 132649815 -120606768 + MER119 DNA MER1_type 362 583 0 21 0 0 0 chr2 132649906 132649927 -120606656 + AT_rich Low_complexity Low_complexity 1 21 0 341 285 62 15 chr2 132650146 132650276 -120606307 + L1ME4a LINE L1 5984 6119 -2 206 286 0 0 chr2 132650441 132650490 -120606093 + GA-rich Low_complexity Low_complexity 6 54 0 280 266 0 13 chr2 132651542 132651621 -120604962 + MLT1K LTR MaLR 187 264 -324 287 122 20 0 chr2 132651813 132651862 -120604721 + MLT1K LTR MaLR 538 587 -1 194 227 15 30 chr2 132652024 132652090 -120604493 - L2 LINE L2 -208 3064 3000 1127 166 36 32 chr2 132652634 132652912 -120603671 - L1MB8 LINE L1 0 6178 5900 2471 91 3 0 chr2 132652913 132653221 -120603362 - AluSp SINE Alu -4 309 1 1975 166 62 0 chr2 132653222 132653607 -120602976 + L1MB8 LINE L1 5463 5871 -307 885 215 12 104 chr2 132653602 132654026 -120602557 - L1M4 LINE L1 -2991 3653 3269 * 5901 207 40 67 chr2 132654048 132654740 -120601843 - L1M4 LINE L1 -4464 2182 1473 2569 87 0 0 chr2 132654740 132655051 -120601532 - AluSp SINE Alu -1 312 2 5901 207 40 67 chr2 132655051 132655627 -120600956 - L1M4 LINE L1 -5173 1473 883 1896 168 30 0 chr2 132655627 132655924 -120600659 - AluSx SINE Alu -6 306 1 5901 207 40 67 chr2 132655924 132656858 -120599725 - L1M4 LINE L1 -5763 883 18 1417 177 12 110 chr2 132656859 132657187 -120599396 - AluJb SINE Alu -6 296 1 1900 133 35 18 chr2 132657959 132658245 -120598338 + AluSx SINE Alu 1 291 -21 2127 104 0 0 chr2 132658248 132658517 -120598066 + AluSq SINE Alu 28 296 -17 216 0 0 0 chr2 132658587 132658611 -120597972 + (GA)n Simple_repeat Simple_repeat 2 25 0 2106 152 0 3 chr2 132659805 132660114 -120596469 - AluSc SINE Alu -1 308 1 423 220 20 13 chr2 132660455 132660591 -120595992 + MLT1F1 LTR MaLR 456 565 -2 302 324 110 17 chr2 132660683 132660784 -120595799 - L1ME4a LINE L1 -65 6056 5966 288 0 0 0 chr2 132660784 132660816 -120595767 + (TTG)n Simple_repeat Simple_repeat 2 33 0 302 324 110 17 chr2 132660816 132660887 -120595696 - L1ME4a LINE L1 -155 5966 5868 726 269 60 69 chr2 132660888 132661252 -120595331 + LTR68 LTR ERV1 3 363 -377 1894 169 22 33 chr2 132661371 132661737 -120594846 + MLT1A2 LTR MaLR 1 362 -12 1926 159 3 3 chr2 132662116 132662417 -120594166 + AluJb SINE Alu 1 301 -11 182 200 0 0 chr2 132662445 132662475 -120594108 + MER5B DNA MER1_type 15 44 -134 24 32 0 0 chr2 132663216 132663247 -120593336 + AT_rich Low_complexity Low_complexity 1 31 0 2200 125 0 3 chr2 132663303 132663608 -120592975 - AluSx SINE Alu -8 304 1 3863 236 58 44 chr2 132663801 132664782 -120591801 + Charlie1 DNA MER1_type 1475 2479 -282 2322 108 0 0 chr2 132664782 132665077 -120591506 - AluSx SINE Alu -14 298 4 3863 236 58 44 chr2 132665077 132665357 -120591226 + Charlie1 DNA MER1_type 2479 2754 -7 206 365 0 0 chr2 132665451 132665514 -120591069 - L2 LINE L2 0 3313 3251 1883 157 116 30 chr2 132665567 132665999 -120590584 + MLT2B1 LTR ERVL 2 470 -50 367 258 16 8 chr2 132666674 132666802 -120589781 + Charlie1 DNA MER1_type 2606 2734 -27 244 250 0 0 chr2 132667408 132667468 -120589115 + L3 LINE CR1 1504 1563 -14 2243 148 91 16 chr2 132668022 132668106 -120588477 + MER4E LTR ERV1 1 77 -702 2141 128 0 26 chr2 132668106 132668418 -120588165 + AluSx SINE Alu 1 304 -8 2243 148 91 16 chr2 132668418 132669068 -120587515 + MER4E LTR ERV1 77 779 0 510 303 54 41 chr2 132669179 132669473 -120587110 + L1MC4 LINE L1 7739 8036 -6 346 309 44 7 chr2 132670236 132670372 -120586211 + L2 LINE L2 2565 2705 -609 581 313 58 11 chr2 132672127 132672402 -120584181 - L1MC4 LINE L1 -6 8036 7749 1602 163 10 0 chr2 132672857 132673146 -120583437 - MER46B DNA MER2_type -69 167 1 384 258 11 11 chr2 132673146 132673235 -120583348 - Charlie1 DNA MER1_type -2672 89 1 1117 239 74 23 chr2 132673245 132673839 -120582744 - Zaphod DNA AcHobo -3369 662 2 217 268 49 12 chr2 132673858 132673940 -120582643 - L3 LINE CR1 -1 1576 1492 510 186 17 164 chr2 132673948 132674125 -120582458 + MER69 DNA AcHobo 1 2500 -26 678 218 13 0 chr2 132674229 132674385 -120582198 + Zaphod DNA AcHobo 3819 3976 -55 1349 81 0 17 chr2 132675565 132675738 -120580845 + AluY SINE Alu 1 170 -141 585 151 0 0 chr2 132675838 132675924 -120580659 + AluSg/x SINE Alu 214 299 -11 211 232 0 18 chr2 132676713 132676769 -120579814 + (TCTCTG)n Simple_repeat Simple_repeat 2 56 0 392 273 41 58 chr2 132677824 132677996 -120578587 + MIR SINE MIR 36 204 -58 1351 142 16 0 chr2 132678003 132678193 -120578390 + AluJo SINE Alu 1 193 -119 278 333 0 13 chr2 132678405 132678480 -120578103 - MIR3 SINE MIR -131 77 4 2240 121 0 6 chr2 132678654 132678968 -120577615 + AluSq SINE Alu 1 312 -1 2242 126 0 19 chr2 132679004 132679321 -120577262 + AluSx SINE Alu 1 311 -1 1010 162 6 6 chr2 132680140 132680319 -120576264 + MLT1A1 LTR MaLR 25 203 -162 1512 202 40 6 chr2 132680321 132680648 -120575935 + MLT1A1 LTR MaLR 26 363 -2 222 62 0 0 chr2 132681169 132681201 -120575382 + (GA)n Simple_repeat Simple_repeat 1 32 0 1238 85 33 0 chr2 132682542 132682695 -120573888 - AluSq SINE Alu -152 161 4 559 224 14 0 chr2 132682699 132682842 -120573741 + L1MC4 LINE L1 5603 5747 -2061 2131 119 20 7 chr2 132683464 132683759 -120572824 + AluSx SINE Alu 1 299 -13 2370 103 3 3 chr2 132685427 132685737 -120570846 - AluSq SINE Alu -3 310 1 1988 138 27 3 chr2 132685742 132686039 -120570544 - AluSx SINE Alu -2 310 7 1809 216 71 46 chr2 132686046 132686606 -120569977 + L1MC4a LINE L1 5603 6176 -1632 2277 95 0 0 chr2 132686606 132686910 -120569673 + AluSx SINE Alu 1 304 -8 237 325 97 26 chr2 132687006 132687120 -120569463 - MIR3 SINE MIR -78 130 9 1106 107 0 0 chr2 132687157 132687316 -120569267 + AluSc SINE Alu 143 301 -8 552 229 45 93 chr2 132687316 132687738 -120568845 + L1MC4 LINE L1 6175 6567 -1258 2171 109 0 3 chr2 132687738 132688042 -120568541 + AluSq SINE Alu 1 303 -10 1419 184 4 0 chr2 132688158 132688397 -120568186 - MER7A DNA MER2_type -108 238 1 240 305 0 0 chr2 132688638 132688720 -120567863 + L1M4 LINE L1 3620 3701 -2445 267 31 0 0 chr2 132688735 132688767 -120567816 + (TG)n Simple_repeat Simple_repeat 2 33 0 216 0 0 0 chr2 132689597 132689621 -120566962 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 324 250 40 30 chr2 132689964 132690064 -120566519 - L1ME1 LINE L1 -4 6162 6062 770 217 12 0 chr2 132690065 132690231 -120566352 - L1ME1 LINE L1 -229 5937 5770 1976 138 0 3 chr2 132691115 132691419 -120565164 + AluSx SINE Alu 3 305 -7 1466 172 17 21 chr2 132692234 132692525 -120564058 - AluJb SINE Alu -22 290 1 705 191 20 137 chr2 132692665 132693015 -120563568 - L1MC5 LINE L1 -44 7917 7609 24 0 0 0 chr2 132693064 132693088 -120563495 + AT_rich Low_complexity Low_complexity 1 24 0 257 233 39 39 chr2 132693113 132693216 -120563367 - L1MC5 LINE L1 -385 7576 7474 2101 79 4 0 chr2 132693340 132693620 -120562963 - AluY SINE Alu -30 281 1 214 309 0 0 chr2 132694191 132694246 -120562337 + GA-rich Low_complexity Low_complexity 3 57 0 3945 76 0 8 chr2 132694423 132694948 -120561635 - L1PA8 LINE L1 0 6172 5652 41 0 0 0 chr2 132695181 132695222 -120561361 + AT_rich Low_complexity Low_complexity 1 41 0 218 359 97 0 chr2 132696316 132696419 -120560164 - MIR SINE MIR 0 262 150 244 300 82 45 chr2 132696826 132696936 -120559647 - MIR3 SINE MIR -80 128 15 1612 215 154 27 chr2 132697140 132697270 -120559313 - L1ME1 LINE L1 -13 6153 6041 2120 92 0 3 chr2 132697270 132697562 -120559021 + AluY SINE Alu 1 291 -20 1612 215 154 27 chr2 132697562 132697905 -120558678 - L1ME1 LINE L1 -125 6041 5620 287 182 15 30 chr2 132698342 132698408 -120558175 - MIR SINE MIR -100 162 98 371 230 46 0 chr2 132698473 132698560 -120558023 - MIR SINE MIR -56 152 62 799 204 26 0 chr2 132698842 132698994 -120557589 + MSTD LTR MaLR 1 156 -240 1448 162 33 50 chr2 132698995 132699298 -120557285 + AluJo SINE Alu 1 298 -14 1035 147 18 12 chr2 132699463 132699633 -120556950 + MSTD LTR MaLR 226 396 0 634 300 53 28 chr2 132700132 132700379 -120556204 - MIR SINE MIR 0 262 10 254 317 73 32 chr2 132700478 132700601 -120555982 + MIR3 SINE MIR 9 136 -72 2281 91 0 0 chr2 132700688 132700986 -120555597 - AluSg SINE Alu -12 298 1 309 363 30 0 chr2 132701445 132701593 -120554990 + MIR SINE MIR 3 156 -78 2756 221 24 30 chr2 132701600 132702317 -120554266 + L1M4 LINE L1 3995 4708 -1438 2150 82 3 44 chr2 132702317 132702636 -120553947 + AluY SINE Alu 1 306 -5 2756 221 24 30 chr2 132702636 132702677 -120553906 + L1M4 LINE L1 4708 4748 -1398 486 0 0 0 chr2 132702800 132702854 -120553729 + (GAAA)n Simple_repeat Simple_repeat 2 55 0 237 265 29 0 chr2 132703141 132703209 -120553374 + LTR16C LTR ERVL 422 491 0 1795 119 7 14 chr2 132704502 132704818 -120551765 - AluJo SINE Alu 0 312 17 1234 179 39 0 chr2 132705047 132705304 -120551279 + L1M4 LINE L1 4149 4415 -1731 1412 175 0 67 chr2 132705304 132705439 -120551144 + AluJo SINE Alu 1 143 -169 1921 128 3 7 chr2 132705439 132705729 -120550854 + AluSq SINE Alu 1 289 -24 1412 175 0 67 chr2 132705729 132705907 -120550676 + AluJo SINE Alu 143 293 -19 852 94 0 0 chr2 132706028 132706145 -120550438 + AluSg/x SINE Alu 178 294 -16 181 250 0 39 chr2 132706752 132706804 -120549779 - MIR SINE MIR -132 130 81 2183 98 0 3 chr2 132707297 132707594 -120548989 - AluSq SINE Alu -17 296 1 310 314 47 30 chr2 132707594 132707763 -120548820 + L1MC4a LINE L1 5857 6028 -1780 241 280 7 112 chr2 132707936 132708055 -120548528 + MIR SINE MIR 12 115 -147 2194 94 0 3 chr2 132708055 132708353 -120548230 + AluSg SINE Alu 1 297 -13 241 280 7 112 chr2 132708353 132708376 -120548207 + MIR SINE MIR 115 139 -123 213 121 0 0 chr2 132709082 132709115 -120547468 + (TA)n Simple_repeat Simple_repeat 1 33 0 491 236 0 23 chr2 132709136 132709151 -120547432 + GA-rich Low_complexity Low_complexity 3 17 -155 2161 113 0 3 chr2 132709151 132709452 -120547131 + AluSx SINE Alu 1 300 -12 491 236 0 23 chr2 132709452 132709610 -120546973 + GA-rich Low_complexity Low_complexity 17 172 0 1370 55 0 6 chr2 132709612 132709793 -120546790 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 456 244 43 0 chr2 132711515 132711630 -120544953 + LTR16B LTR ERVL 1 120 -344 284 312 18 18 chr2 132711633 132711742 -120544841 + LTR16B LTR ERVL 68 176 -288 1132 219 97 34 chr2 132711782 132712134 -120544449 + MLT1A2 LTR MaLR 1 374 0 1983 123 0 16 chr2 132712486 132712794 -120543789 + AluSx SINE Alu 1 303 -9 248 289 50 16 chr2 132712803 132712924 -120543659 - LTR16B LTR ERVL -285 179 55 1105 113 0 0 chr2 132713025 132713176 -120543407 - AluSq/x SINE Alu -162 151 1 2151 282 101 42 chr2 132713394 132713542 -120543041 + L1MEd LINE L1 5 143 -2347 1695 186 114 47 chr2 132713542 132714014 -120542569 - MLT1D LTR MaLR 0 505 2 2151 282 101 42 chr2 132714014 132715278 -120541305 + L1MEd LINE L1 143 1608 -882 1196 186 45 86 chr2 132715277 132715697 -120540886 + L1MC5 LINE L1 7327 7729 -232 * 363 325 86 0 chr2 132715873 132716024 -120540559 + L1ME3A LINE L1 5763 5926 -244 1187 116 66 15 chr2 132716024 132716222 -120540361 + LTR24B LTR ERV1 1 208 -368 1270 178 19 11 chr2 132716359 132716628 -120539955 + L1MB7 LINE L1 4475 4745 -1401 24163 145 33 18 chr2 132716629 132719918 -120536665 + L1PA8A LINE L1 2 3506 -2940 2108 105 0 13 chr2 132719918 132720233 -120536350 - AluY SINE Alu 0 311 1 24163 145 33 18 chr2 132720233 132723192 -120533391 + L1PA8A LINE L1 3506 6417 -29 219 103 0 0 chr2 132723193 132723232 -120533351 + (T)n Simple_repeat Simple_repeat 1 39 0 2365 57 0 3 chr2 132723264 132723563 -120533020 + AluY SINE Alu 1 298 -13 4490 164 62 59 chr2 132723564 132724005 -120532578 + L1MB7 LINE L1 4738 5176 -1008 648 149 116 16 chr2 132724005 132724126 -120532457 + FLAM_C SINE Alu 1 133 0 4490 164 62 59 chr2 132724126 132725113 -120531470 + L1MB7 LINE L1 5176 6177 -7 482 198 172 0 chr2 132725648 132725764 -120530819 + MIR SINE MIR 17 152 -110 1297 106 0 0 chr2 132725907 132726120 -120530463 + AluSg/x SINE Alu 102 314 0 2383 75 0 0 chr2 132726343 132726651 -120529932 + AluY SINE Alu 1 308 -3 400 290 181 16 chr2 132726681 132726874 -120529709 - MIR SINE MIR -10 252 28 332 286 53 94 chr2 132727831 132728097 -120528486 - L2 LINE L2 -156 3116 2862 2061 182 68 25 chr2 132728770 132729210 -120527373 + LTR2B LTR ERV1 32 490 0 2371 90 0 0 chr2 132729322 132729633 -120526950 - AluSp SINE Alu -2 311 1 1729 166 3 3 chr2 132729823 132730118 -120526465 + AluJb SINE Alu 1 295 -17 2533 53 0 0 chr2 132730323 132730626 -120525957 + AluY SINE Alu 1 303 -8 1646 179 33 3 chr2 132730842 132731279 -120525304 + Tigger7 DNA MER2_type 1 483 -198 6329 226 45 78 chr2 132731287 132731481 -120525102 + L1P LINE L1 1655 1854 -4292 1739 176 0 13 chr2 132731481 132731788 -120524795 + AluJb SINE Alu 1 303 -9 2254 104 0 0 chr2 132731790 132732099 -120524484 + AluSq SINE Alu 1 309 -4 6329 226 45 78 chr2 132732099 132733028 -120523555 + L1P LINE L1 1855 2813 -3333 2021 121 3 3 chr2 132733028 132733334 -120523249 + AluSx SINE Alu 1 306 -6 6329 226 45 78 chr2 132733334 132733407 -120523176 + L1P LINE L1 2813 2887 -3259 2330 69 7 7 chr2 132733407 132733710 -120522873 + AluY SINE Alu 1 303 -8 6329 226 45 78 chr2 132733710 132733817 -120522766 + L1P LINE L1 2887 2996 -3150 877 159 0 0 chr2 132733817 132733949 -120522634 + FLAM_C SINE Alu 1 132 -1 6329 226 45 78 chr2 132733949 132734327 -120522256 + L1P LINE L1 2996 3385 -2761 2153 108 0 0 chr2 132734327 132734622 -120521961 + AluSg SINE Alu 1 295 -15 6329 226 45 78 chr2 132734622 132734899 -120521684 + L1P LINE L1 3385 3538 -2608 2102 114 3 0 chr2 132734899 132735196 -120521387 + AluSx SINE Alu 3 300 -12 6329 226 45 78 chr2 132735196 132735509 -120521074 + L1P LINE L1 3538 3860 -2286 1002 99 26 0 chr2 132735688 132735839 -120520744 + AluSg/x SINE Alu 154 308 -4 33 97 0 0 chr2 132736840 132736943 -120519640 + GC_rich Low_complexity Low_complexity 1 103 0 24 53 0 0 chr2 132736951 132736989 -120519594 + GC_rich Low_complexity Low_complexity 1 38 0 25 0 0 0 chr2 132738524 132738549 -120518034 + AT_rich Low_complexity Low_complexity 1 25 0 432 235 72 65 chr2 132739292 132739445 -120517138 - MIR3 SINE MIR -9 199 46 278 279 36 45 chr2 132739469 132739580 -120517003 + MIR SINE MIR 23 132 -76 2198 164 100 30 chr2 132739681 132739933 -120516650 + L1MC/D LINE L1 1523 1756 -4670 2269 129 30 24 chr2 132739933 132740306 -120516277 + THE1C LTR MaLR 1 375 0 10184 116 43 37 chr2 132740306 132741198 -120515385 + THE1C-int LTR MaLR 1 909 -671 2252 131 0 0 chr2 132741198 132741496 -120515087 + AluSx SINE Alu 1 298 -14 10184 116 43 37 chr2 132741496 132742173 -120514410 + THE1C-int LTR MaLR 909 1580 0 2339 118 18 32 chr2 132742173 132742553 -120514030 + THE1C LTR MaLR 1 375 0 2198 164 100 30 chr2 132742553 132742893 -120513690 + L1MC/D LINE L1 1756 2258 -4168 1957 134 28 0 chr2 132742893 132743177 -120513406 + AluSx SINE Alu 1 292 -20 2198 164 100 30 chr2 132743177 132743246 -120513337 + L1MC/D LINE L1 2258 2321 -4105 765 167 0 43 chr2 132743246 132743384 -120513199 + AluJ SINE Alu 1 132 -180 247 101 0 63 chr2 132743424 132743503 -120513080 + L1MC/D LINE L1 2316 2389 -4037 2654 113 11 0 chr2 132743503 132743874 -120512709 - THE1C LTR MaLR 0 375 1 4432 121 10 6 chr2 132743875 132744547 -120512036 - THE1C-int LTR MaLR -1 1579 905 1852 138 66 35 chr2 132744548 132744896 -120511687 - MSTC LTR MaLR -69 359 1 795 214 15 5 chr2 132744896 132745102 -120511481 + L1MC/D LINE L1 3063 3270 -3156 206 0 0 65 chr2 132745480 132745511 -120511072 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 685 313 42 20 chr2 132745533 132745936 -120510647 + L1MC/D LINE L1 3827 4238 -2188 809 160 0 0 chr2 132745945 132746070 -120510513 - AluJb SINE Alu -176 136 12 648 157 192 58 chr2 132746070 132746242 -120510341 + AluJ SINE Alu 107 301 -11 2059 130 10 0 chr2 132746260 132746552 -120510031 + AluSx SINE Alu 1 295 -17 1694 190 0 7 chr2 132746585 132746875 -120509708 - AluJo SINE Alu -24 288 1 1126 308 59 45 chr2 132746972 132748162 -120508421 + L1MC/D LINE L1 4317 5522 -904 1693 171 0 11 chr2 132748183 132748492 -120508091 + AluJb SINE Alu 1 306 0 863 175 40 51 chr2 132748524 132748701 -120507882 - FAM SINE Alu 0 175 1 381 102 0 0 chr2 132748759 132748818 -120507765 + (CA)n Simple_repeat Simple_repeat 2 60 0 385 132 40 0 chr2 132748819 132748895 -120507688 + L1MC/D LINE L1 5658 5736 -2352 415 224 0 0 chr2 132748899 132748975 -120507608 - AluJb SINE Alu -9 303 228 826 184 20 7 chr2 132748975 132749127 -120507456 - AluJb SINE Alu -158 154 1 451 302 14 0 chr2 132749135 132749274 -120507309 + L1MC/D LINE L1 5745 5885 -2203 183 205 0 0 chr2 132749402 132749441 -120507142 + CT-rich Low_complexity Low_complexity 2 40 0 2312 95 26 0 chr2 132749612 132749917 -120506666 - AluSq SINE Alu 0 313 1 808 215 90 0 chr2 132749962 132750162 -120506421 - MLT2B2 LTR ERVL -296 219 2 752 257 33 29 chr2 132750164 132750436 -120506147 - L1M4 LINE L1 -3284 2862 2590 562 289 15 57 chr2 132751241 132751397 -120505186 + L1MC4 LINE L1 7789 7931 -111 2330 82 7 0 chr2 132751397 132751689 -120504894 - AluSp SINE Alu -19 294 1 562 289 15 57 chr2 132751689 132751795 -120504788 + L1MC4 LINE L1 7931 8040 -2 23 33 0 0 chr2 132751839 132751869 -120504714 + AT_rich Low_complexity Low_complexity 1 30 0 195 286 0 0 chr2 132752398 132752440 -120504143 + L2 LINE L2 3271 3312 -1 * 327 312 116 21 chr2 132752438 132752627 -120503956 + MIR SINE MIR 42 248 -14 245 366 59 11 chr2 132753134 132753320 -120503263 + L3 LINE CR1 654 848 -729 229 252 225 18 chr2 132753557 132753668 -120502915 + MER77 LTR ERV1 66 199 -406 * 681 246 115 103 chr2 132753649 132754181 -120502402 + MER21B LTR ERV1 133 670 -193 360 301 102 55 chr2 132756307 132756902 -120499681 + L1M4 LINE L1 3338 3960 -2186 1932 53 4 4 chr2 132756936 132757181 -120499402 - L1PA8 LINE L1 0 6172 5928 1402 195 12 4 chr2 132758032 132758289 -120498294 + AluJo SINE Alu 1 259 -53 2102 115 3 14 chr2 132759869 132760200 -120496383 + AluJb SINE Alu 1 328 0 217 0 61 0 chr2 132760292 132760325 -120496258 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 354 269 8 60 chr2 132761375 132761450 -120495133 + L1MC5 LINE L1 7320 7387 -574 1765 173 13 10 chr2 132761450 132761750 -120494833 + AluJb SINE Alu 1 301 -11 354 269 8 60 chr2 132761750 132761808 -120494775 + L1MC5 LINE L1 7387 7446 -515 1966 92 8 0 chr2 132761858 132762109 -120494474 + AluSq SINE Alu 1 253 -60 2487 58 7 3 chr2 132762319 132762614 -120493969 + AluY SINE Alu 1 296 -15 198 0 0 0 chr2 132762978 132763000 -120493583 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2057 117 52 0 chr2 132763554 132763844 -120492739 + AluSx SINE Alu 1 305 -7 1030 148 7 0 chr2 132765705 132765860 -120490723 + FRAM SINE Alu 1 156 -10 376 226 118 10 chr2 132766432 132766534 -120490049 - MIR SINE MIR -58 150 38 337 230 92 33 chr2 132766898 132767046 -120489537 + MIR SINE MIR 35 188 -67 2108 113 30 3 chr2 132767415 132767716 -120488867 - AluSx SINE Alu -3 309 1 930 86 39 0 chr2 132767721 132767849 -120488734 - AluSg/x SINE Alu -13 299 167 433 338 64 0 chr2 132769422 132769579 -120487004 - L2 LINE L2 0 3272 3106 2169 116 0 13 chr2 132770293 132770595 -120485988 - AluSx SINE Alu -7 305 8 2267 99 7 0 chr2 132771390 132771684 -120484899 - AluSg1 SINE Alu -13 296 1 371 244 61 0 chr2 132771965 132772080 -120484503 - L1MB7 LINE L1 0 6184 6063 1164 153 0 0 chr2 132772081 132772251 -120484332 - AluSg/x SINE Alu -9 301 132 1714 72 10 0 chr2 132772251 132772459 -120484124 - AluSq SINE Alu -17 296 87 5255 138 22 11 chr2 132772459 132773335 -120483248 - L1MC1 LINE L1 -20 6313 5429 1944 160 20 7 chr2 132773936 132774242 -120482341 + AluJb SINE Alu 1 310 -2 261 279 200 6 chr2 132774247 132774412 -120482171 + MIR SINE MIR 62 258 -4 664 257 68 44 chr2 132774631 132774927 -120481656 + MLT1K LTR MaLR 286 588 0 2002 152 0 0 chr2 132774965 132775254 -120481329 - AluSx SINE Alu -23 289 1 381 208 73 0 chr2 132775379 132775475 -120481108 + MER94 DNA DNA 23 125 -9 2311 122 0 3 chr2 132775862 132776174 -120480409 + AluSx SINE Alu 1 311 -1 2368 186 16 5 chr2 132777036 132777465 -120479118 + Tigger2a DNA MER2_type 1 434 0 770 234 55 38 chr2 132777489 132777514 -120479069 + L1ME3A LINE L1 5127 5150 -1014 2640 33 0 58 chr2 132777514 132777844 -120478739 - AluY SINE Alu 0 311 1 770 234 55 38 chr2 132777844 132778215 -120478368 + L1ME3A LINE L1 5150 5529 -635 275 241 31 99 chr2 132778522 132778684 -120477899 + L2 LINE L2 2962 3112 -160 606 243 93 9 chr2 132779147 132779361 -120477222 - L1ME1 LINE L1 -140 6026 5795 1730 163 13 33 chr2 132779420 132779720 -120476863 + AluJb SINE Alu 5 298 -14 1483 249 171 14 chr2 132779898 132780487 -120476096 - L2 LINE L2 -277 2995 2311 2434 237 84 19 chr2 132780501 132781252 -120475331 + L1ME1 LINE L1 5312 6111 -55 195 250 0 0 chr2 132781931 132781967 -120474616 - L2 LINE L2 -22 3291 3256 335 241 46 0 chr2 132781968 132782055 -120474528 - L2 LINE L2 -1 3312 3222 555 254 95 28 chr2 132782090 132782342 -120474241 + L1ME3A LINE L1 5864 6132 -38 285 70 53 0 chr2 132782611 132782668 -120473915 + (TG)n Simple_repeat Simple_repeat 1 60 0 951 126 0 0 chr2 132783577 132783704 -120472879 + FLAM_C SINE Alu 1 127 -16 26 0 0 0 chr2 132783704 132783730 -120472853 + AT_rich Low_complexity Low_complexity 1 26 0 2187 126 7 0 chr2 132784631 132784924 -120471659 - AluSx SINE Alu -17 295 1 238 333 94 43 chr2 132785844 132785982 -120470601 - MIR SINE MIR -35 227 83 1792 261 191 46 chr2 132786028 132786137 -120470446 - HAL1 LINE L1 -61 2446 2354 2029 148 7 3 chr2 132786137 132786447 -120470136 - AluJb SINE Alu -1 311 1 1792 261 191 46 chr2 132786447 132786698 -120469885 - HAL1 LINE L1 -153 2354 2141 2367 88 0 3 chr2 132786698 132786994 -120469589 - AluSc SINE Alu -14 295 1 1792 261 191 46 chr2 132786994 132788664 -120467919 - HAL1 LINE L1 -366 2141 99 913 134 0 8 chr2 132789074 132789201 -120467382 + FLAM_C SINE Alu 1 126 -7 2427 99 0 3 chr2 132790059 132790372 -120466211 - AluSx SINE Alu 0 312 1 2460 91 3 0 chr2 132790627 132790935 -120465648 - AluSp SINE Alu -3 310 2 2433 82 0 19 chr2 132792081 132792396 -120464187 + AluSq SINE Alu 3 311 -2 3746 209 45 3 chr2 132792712 132793578 -120463005 + L1 LINE L1 4156 5057 -1089 3880 169 28 36 chr2 132793582 132793820 -120462763 - L1MB8 LINE L1 -81 6097 5859 2163 122 0 7 chr2 132793820 132794123 -120462460 - AluSx SINE Alu -10 302 2 3880 169 28 36 chr2 132794123 132794850 -120461733 - L1MB8 LINE L1 -319 5859 5139 912 212 135 9 chr2 132797850 132798072 -120458511 + MIR SINE MIR 3 252 -10 546 67 0 101 chr2 132799468 132799507 -120457076 + MADE1 DNA Mariner 1 28 -52 2292 78 20 3 chr2 132799507 132799800 -120456783 - AluSq SINE Alu -15 298 1 546 67 0 101 chr2 132799800 132799849 -120456734 + MADE1 DNA Mariner 28 80 0 1249 191 87 29 chr2 132800235 132800707 -120455876 + MER92B LTR ERV1 1 555 -81 399 306 126 26 chr2 132850714 132850985 -120405598 + L1MCc LINE L1 296 593 -5830 195 42 0 0 chr2 132851024 132851048 -120405535 + (A)n Simple_repeat Simple_repeat 1 24 0 1892 228 141 42 chr2 132851125 132851318 -120405265 + L1MCc LINE L1 835 1008 -6114 2117 75 6 99 chr2 132851318 132851651 -120404932 + AluSq SINE Alu 1 302 -11 1892 228 141 42 chr2 132851651 132852627 -120403956 + L1MCc LINE L1 1008 2380 -4742 1737 175 29 4 chr2 132852627 132852907 -120403676 + AluJb SINE Alu 1 287 -25 1892 228 141 42 chr2 132852907 132853227 -120403356 + L1MCc LINE L1 2380 2667 -4455 231 255 0 0 chr2 132853249 132853300 -120403283 - L1ME LINE L1 -406 5715 5665 730 126 0 39 chr2 132854469 132854596 -120401987 + AluSg/x SINE Alu 189 310 0 1586 158 30 47 chr2 132854608 132854906 -120401677 + AluJo SINE Alu 1 293 -19 22 35 0 0 chr2 132855226 132855255 -120401328 + AT_rich Low_complexity Low_complexity 1 29 0 271 200 57 114 chr2 132855651 132855756 -120400827 + MIR SINE MIR 5 103 -159 191 323 48 0 chr2 132856398 132856460 -120400123 - MIR3 SINE MIR -51 157 93 1129 246 7 36 chr2 132856604 132856909 -120399674 + AluJb SINE Alu 2 297 -5 497 153 51 8 chr2 132857084 132857202 -120399381 - L1MB8 LINE L1 -10 6168 6046 21 0 0 0 chr2 132857859 132857880 -120398703 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 132859117 132859145 -120397438 + AT_rich Low_complexity Low_complexity 1 28 0 2192 126 0 0 chr2 132859201 132859502 -120397081 + AluSx SINE Alu 1 301 -11 21 71 0 0 chr2 132860505 132860547 -120396036 + AT_rich Low_complexity Low_complexity 1 42 0 2417 76 0 0 chr2 132860575 132860863 -120395720 - AluSc SINE Alu -21 288 1 352 271 0 0 chr2 132861491 132861624 -120394959 + G-rich Low_complexity Low_complexity 1 133 0 4063 169 93 38 chr2 132861744 132862397 -120394186 + L1MC2 LINE L1 5168 5903 -441 1844 131 85 0 chr2 132862397 132862679 -120393904 + AluSx SINE Alu 1 306 -6 4063 169 93 38 chr2 132862679 132863126 -120393457 + L1MC2 LINE L1 5903 6324 -20 2048 160 23 69 chr2 132863189 132863320 -120393263 + L1ME1 LINE L1 5487 5623 -541 2634 123 52 0 chr2 132863320 132863727 -120392856 + MSTA LTR MaLR 1 428 0 2048 160 23 69 chr2 132863727 132864114 -120392469 + L1ME1 LINE L1 5623 5981 -183 415 267 18 99 chr2 132864126 132864347 -120392236 + L1ME1 LINE L1 5955 6157 -9 2328 92 0 0 chr2 132864778 132865081 -120391502 + AluY SINE Alu 1 303 -8 190 311 169 20 chr2 132865538 132865686 -120390897 + MIR SINE MIR 32 201 -61 839 228 55 51 chr2 132865908 132866145 -120390438 + MIR SINE MIR 20 257 -5 351 259 96 22 chr2 132866451 132866586 -120389997 + MIR SINE MIR 105 249 -13 1242 190 123 35 chr2 132866650 132866966 -120389617 - MER2 DNA MER2_type 0 344 1 1351 151 5 0 chr2 132867496 132867701 -120388882 - AluJo SINE Alu -106 206 1 2272 103 36 0 chr2 132868590 132868891 -120387692 + AluSx SINE Alu 1 312 0 1866 68 4 19 chr2 132869349 132869613 -120386970 - Tigger1 DNA MER2_type -692 1726 1467 486 112 101 95 chr2 132869625 132869708 -120386875 - Tigger1 DNA MER2_type -82 2336 2255 198 0 0 0 chr2 132869708 132869730 -120386853 + (TA)n Simple_repeat Simple_repeat 2 23 0 486 112 101 95 chr2 132869730 132869749 -120386834 - Tigger1 DNA MER2_type -163 2255 2238 2262 56 3 69 chr2 132869749 132870068 -120386515 + AluY SINE Alu 1 298 -13 486 112 101 95 chr2 132870068 132870133 -120386450 - Tigger1 DNA MER2_type -180 2238 2167 595 252 8 0 chr2 132870135 132870266 -120386317 - FLAM_C SINE Alu 0 133 2 1420 194 60 30 chr2 132870288 132870669 -120385914 + L1 LINE L1 4169 4566 -1580 2341 152 76 0 chr2 132870669 132871065 -120385518 + MSTB LTR MaLR 1 426 0 1420 194 60 30 chr2 132871065 132871117 -120385466 + L1 LINE L1 4566 4615 -1531 1789 144 26 0 chr2 132871119 132871383 -120385200 + AluSx SINE Alu 2 272 -40 278 130 43 58 chr2 132871383 132871452 -120385131 - Tigger1 DNA MER2_type -2349 69 2 302 239 23 0 chr2 132871453 132871541 -120385042 + L1M4c LINE L1 1587 1676 -4708 368 310 41 56 chr2 132871595 132872008 -120384575 - L1MC4 LINE L1 -131 7911 7505 362 330 89 7 chr2 132872098 132872368 -120384215 - L1MC4 LINE L1 -548 7494 7203 571 203 55 16 chr2 132872785 132872913 -120383670 + FLAM_A SINE Alu 1 133 0 212 274 164 0 chr2 132873724 132873797 -120382786 + L2 LINE L2 3157 3241 -31 953 249 18 18 chr2 132873953 132874182 -120382401 - MIR SINE MIR -26 236 8 465 221 129 36 chr2 132874510 132874650 -120381933 + MIR SINE MIR 109 261 -1 26 30 0 0 chr2 132874731 132874764 -120381819 + AT_rich Low_complexity Low_complexity 1 33 0 1391 147 0 158 chr2 132874822 132875189 -120381394 + AluJb SINE Alu 1 309 -3 502 204 19 0 chr2 132875934 132876042 -120380541 - AluSg/x SINE Alu -4 308 199 1828 171 17 0 chr2 132876867 132877159 -120379424 - AluJb SINE Alu -14 298 2 578 146 18 105 chr2 132877209 132877374 -120379209 - MLT1I LTR MaLR -35 374 225 1522 163 64 66 chr2 132877374 132877766 -120378817 - LTR22 LTR ERVK 0 509 119 423 232 128 8 chr2 132877886 132878011 -120378572 - LTR22 LTR ERVK -369 140 1 1519 154 15 15 chr2 132878011 132878402 -120378181 - HERVK22 LTR ERVK 0 6837 3194 2001 117 0 0 chr2 132878402 132878685 -120377898 + AluSc SINE Alu 26 308 0 36645 78 12 1 chr2 132878689 132883712 -120372871 - HERVK22 LTR ERVK -1759 5078 1 1986 179 85 62 chr2 132883714 132884210 -120372373 - LTR22 LTR ERVK -2 507 1 446 308 47 28 chr2 132884211 132884425 -120372158 - MLT1I LTR MaLR -178 231 14 2045 126 20 0 chr2 132885980 132886274 -120370309 - AluSx SINE Alu -12 300 1 1898 166 0 7 chr2 132887216 132887518 -120369065 + AluJb SINE Alu 1 300 -12 252 0 0 0 chr2 132887646 132887674 -120368909 + (CA)n Simple_repeat Simple_repeat 2 29 0 265 238 202 0 chr2 132887982 132888066 -120368517 - L3 LINE CR1 -7 1570 1470 440 345 99 31 chr2 132888146 132888185 -120368398 + L3 LINE CR1 185 220 -1357 1986 151 0 3 chr2 132888185 132888490 -120368093 + AluSx SINE Alu 1 304 -8 440 345 99 31 chr2 132888490 132888743 -120367840 + L3 LINE CR1 220 497 -1080 1585 154 33 59 chr2 132888808 132889114 -120367469 - AluJo SINE Alu -14 298 1 2132 117 10 0 chr2 132889143 132889434 -120367149 - AluSc SINE Alu -15 294 1 255 234 31 16 chr2 132889675 132889739 -120366844 - MIR3 SINE MIR -11 197 133 246 310 20 10 chr2 132890628 132890728 -120365855 + L1MC/D LINE L1 5741 5841 -1967 370 257 128 0 chr2 132890907 132891016 -120365567 + L2 LINE L2 3190 3312 -1 2250 92 3 3 chr2 132891225 132891519 -120365064 + AluSx SINE Alu 1 294 -18 315 283 91 0 chr2 132892285 132892384 -120364199 + MER117 DNA MER1_type 28 135 -62 3095 116 33 2 chr2 132892701 132893151 -120363432 - L1PA13 LINE L1 -4 6159 5696 21 0 0 0 chr2 132894516 132894537 -120362046 + AT_rich Low_complexity Low_complexity 1 21 0 2089 142 0 0 chr2 132894742 132895044 -120361539 + AluSg SINE Alu 1 302 -8 787 87 0 10 chr2 132895085 132895189 -120361394 - FLAM_C SINE Alu -6 137 35 2258 78 0 0 chr2 132895373 132895654 -120360929 - AluY SINE Alu -30 281 1 2609 64 0 0 chr2 132895886 132896197 -120360386 - AluY SINE Alu 0 311 1 306 0 0 0 chr2 132896754 132896788 -120359795 + (TG)n Simple_repeat Simple_repeat 2 35 0 1234 142 125 13 chr2 132897699 132897931 -120358652 - MER68 LTR ERV1 -297 265 8 442 245 59 69 chr2 132897990 132898102 -120358481 + L1M4c LINE L1 2003 2114 -4270 1701 134 53 11 chr2 132898102 132898386 -120358197 + AluJb SINE Alu 1 296 -16 442 245 59 69 chr2 132898386 132898477 -120358106 + L1M4c LINE L1 2114 2204 -4180 259 170 0 43 chr2 132898489 132898536 -120358047 + Tigger4(Zombi) DNA MER2_type 63 107 -2624 569 194 37 9 chr2 132898640 132898748 -120357835 - FLAM_C SINE Alu -30 113 3 3269 123 32 83 chr2 132898750 132899378 -120357205 + Tigger1 DNA MER2_type 1823 2418 0 279 205 80 27 chr2 132899392 132899504 -120357079 + L1MC4 LINE L1 7925 8042 0 455 221 139 6 chr2 132900696 132900854 -120355729 + MIR SINE MIR 74 252 -10 21 71 0 0 chr2 132901154 132901196 -120355387 + GC_rich Low_complexity Low_complexity 1 42 0 315 177 0 0 chr2 132901196 132901258 -120355325 + (CA)n Simple_repeat Simple_repeat 2 63 0 22 70 0 0 chr2 132901303 132901346 -120355237 + GC_rich Low_complexity Low_complexity 1 43 0 21 36 0 0 chr2 132901454 132901482 -120355101 + GC_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr2 132901852 132901875 -120354708 + GC_rich Low_complexity Low_complexity 1 23 0 196 29 0 57 chr2 132901970 132902005 -120354578 + (CCCCG)n Simple_repeat Simple_repeat 3 35 0 215 250 0 19 chr2 132902402 132902454 -120354129 - MIR SINE MIR -58 150 100 200 164 0 148 chr2 132903148 132903209 -120353374 + L2 LINE L2 3219 3270 -2 308 305 92 92 chr2 132903477 132903716 -120352867 - L2 LINE L2 -6 3266 3028 1601 188 56 22 chr2 132903721 132904067 -120352516 - MLT1E3 LTR MaLR 0 616 267 200 164 0 148 chr2 132904103 132904164 -120352419 + L2 LINE L2 3219 3270 -2 2121 107 13 3 chr2 132904506 132904805 -120351778 - AluSg SINE Alu -8 302 1 463 244 143 12 chr2 132904805 132904991 -120351592 - MLT1E1 LTR MaLR -422 202 1 343 291 77 0 chr2 132905316 132905433 -120351150 - MLT1L LTR MaLR -2 613 488 3317 125 46 7 chr2 132905572 132906162 -120350421 - MER4B LTR ERV1 0 779 1 5836 238 70 16 chr2 132906343 132907492 -120349091 + L1MB7 LINE L1 2670 3967 -2179 2183 122 0 10 chr2 132907492 132907804 -120348779 + AluSx SINE Alu 4 312 0 5836 238 70 16 chr2 132907804 132908592 -120347991 + L1MB7 LINE L1 3967 4711 -1435 2271 211 177 19 chr2 132908585 132908882 -120347701 + L1MB7 LINE L1 5387 5636 -548 * 1841 163 0 24 chr2 132908882 132909198 -120347385 + AluSx SINE Alu 1 309 0 2271 211 177 19 chr2 132909198 132909544 -120347039 + L1MB7 LINE L1 5636 6169 -15 705 232 96 9 chr2 132909558 132909778 -120346805 - MER102b DNA MER1_type -33 308 70 1564 155 21 34 chr2 132909937 132910228 -120346355 - AluJb SINE Alu -5 307 21 203 336 212 0 chr2 132910363 132910476 -120346107 - MIR3 SINE MIR -41 167 31 862 182 144 0 chr2 132910659 132910840 -120345743 - AluJb SINE Alu -14 298 92 824 190 82 60 chr2 132910840 132911109 -120345474 + L1MC4 LINE L1 6781 7055 -987 642 205 0 8 chr2 132911124 132911246 -120345337 + FLAM_A SINE Alu 22 142 0 2666 204 37 94 chr2 132911255 132912167 -120344416 + L1MC4 LINE L1 7040 7899 -143 666 274 178 7 chr2 132912244 132912525 -120344058 + L2 LINE L2 2376 2704 -610 2055 152 0 0 chr2 132912679 132912988 -120343595 - AluJo SINE Alu -3 309 1 208 374 115 40 chr2 132913162 132913440 -120343143 + L2 LINE L2 2017 2315 -999 10967 29 3 129 chr2 132913488 132915071 -120341512 + SVA Other Other 4 1386 0 1881 267 143 11 chr2 132915292 132916022 -120340561 + L1MEc LINE L1 549 1374 -5022 5929 104 27 52 chr2 132916173 132917151 -120339432 - Tigger1 DNA MER2_type -1 2417 1465 829 109 27 14 chr2 132917156 132917303 -120339280 - Tigger1 DNA MER2_type -82 2336 2188 695 190 17 0 chr2 132917331 132917447 -120339136 - FLAM_C SINE Alu -8 135 18 2282 205 62 11 chr2 132917451 132918101 -120338482 + L1 LINE L1 4419 5390 -756 1138 154 10 15 chr2 132918101 132918296 -120338287 + AluJo SINE Alu 86 279 -33 1070 232 126 3 chr2 132918327 132918637 -120337946 + L1M4 LINE L1 4655 5002 -1144 4531 200 34 49 chr2 132918742 132919375 -120337208 + L1MC2 LINE L1 3808 4449 -1895 2285 114 3 0 chr2 132919375 132919681 -120336902 + AluSp SINE Alu 1 307 -6 4531 200 34 49 chr2 132919681 132919946 -120336637 + L1MC2 LINE L1 4449 4716 -1628 1983 139 3 17 chr2 132919946 132920248 -120336335 - AluSx SINE Alu -13 299 2 4531 200 34 49 chr2 132920248 132920561 -120336022 + L1MC2 LINE L1 4716 5032 -1312 1883 150 24 0 chr2 132920561 132920855 -120335728 + AluJo SINE Alu 2 302 -10 4531 200 34 49 chr2 132920855 132921499 -120335084 + L1MC2 LINE L1 5032 5607 -737 803 173 31 0 chr2 132921500 132921627 -120334956 + FLAM_C SINE Alu 2 132 -11 4251 141 31 34 chr2 132921628 132922001 -120334582 + L1MC2 LINE L1 5597 5970 -374 2172 101 11 0 chr2 132922001 132922288 -120334295 + AluSg1 SINE Alu 1 290 -19 4251 141 31 34 chr2 132922288 132922598 -120333985 + L1MC2 LINE L1 5970 6280 -64 2233 101 3 10 chr2 132922598 132922906 -120333677 - AluSg SINE Alu -4 306 1 4251 141 31 34 chr2 132922906 132922961 -120333622 + L1MC2 LINE L1 6280 6334 -10 2300 102 0 10 chr2 132922968 132923271 -120333312 - AluSx SINE Alu -12 300 1 374 289 97 23 chr2 132923696 132924133 -120332450 + L1MCc LINE L1 1237 1865 -4887 283 255 21 21 chr2 132924314 132924408 -120332175 + MIR3 SINE MIR 2 95 -113 1977 148 3 0 chr2 132924894 132925191 -120331392 + AluSx SINE Alu 1 298 -14 219 250 0 0 chr2 132925199 132925251 -120331332 + MIR SINE MIR 180 231 -31 822 204 56 5 chr2 132927048 132927244 -120329339 + L1PB4 LINE L1 5950 6155 -1 1943 130 0 14 chr2 132927266 132927550 -120329033 + AluSx SINE Alu 1 280 -32 219 69 0 0 chr2 132927550 132927579 -120329004 + (CAAT)n Simple_repeat Simple_repeat 4 32 0 255 279 0 0 chr2 132927957 132928043 -120328540 - L1 LINE L1 -2701 3445 3360 319 276 51 66 chr2 132928050 132928246 -120328337 - L1 LINE L1 -2902 3244 3052 183 42 0 0 chr2 132928264 132928288 -120328295 + (TATG)n Simple_repeat Simple_repeat 2 25 0 1749 156 7 0 chr2 132928295 132928564 -120328019 - AluJb SINE Alu -28 284 14 1749 181 19 59 chr2 132928614 132928985 -120327598 - MLT1C LTR MaLR 0 467 112 213 65 0 0 chr2 132928985 132929016 -120327567 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1208 108 0 0 chr2 132929019 132929177 -120327406 - AluSg/x SINE Alu -31 279 122 706 207 0 0 chr2 132929177 132929298 -120327285 - MLT1C LTR MaLR -345 122 2 2112 189 48 18 chr2 132929303 132929700 -120326883 + MLT2D LTR ERVL 2 410 -4 2180 127 0 0 chr2 132929748 132930039 -120326544 - AluSq SINE Alu -22 291 1 550 279 169 30 chr2 132930050 132930336 -120326247 - L1 LINE L1 -3128 3018 2773 2004 134 7 0 chr2 132930336 132930626 -120325957 + AluSx SINE Alu 1 292 -20 550 279 169 30 chr2 132930626 132931114 -120325469 - L1 LINE L1 -3373 2773 2136 1295 290 38 13 chr2 132931160 132931192 -120325391 - L1M4 LINE L1 -1111 5846 5816 2286 111 0 3 chr2 132931192 132931499 -120325084 - AluSx SINE Alu -6 306 1 1295 290 38 13 chr2 132931499 132931938 -120324645 - L1M4 LINE L1 -1141 5816 5363 337 244 107 15 chr2 132932176 132932307 -120324276 - L1M4 LINE L1 -6707 152 10 191 270 0 32 chr2 132932622 132932685 -120323898 + L2 LINE L2 1468 1528 -1786 849 174 0 21 chr2 132932792 132932936 -120323647 - FLAM_C SINE Alu -1 142 2 467 213 22 73 chr2 132932942 132933078 -120323505 + MER5B DNA MER1_type 1 129 -49 2365 91 0 3 chr2 132933098 132933407 -120323176 - AluSc SINE Alu -1 308 1 2136 125 0 0 chr2 132933413 132933708 -120322875 - AluSx SINE Alu -17 295 1 509 208 31 0 chr2 132933709 132933805 -120322778 - MER2 DNA MER2_type -246 99 1 2126 120 0 0 chr2 132933946 132934237 -120322346 - AluSx SINE Alu -21 291 1 1454 97 0 0 chr2 132934696 132934881 -120321702 + AluSc SINE Alu 118 302 -7 860 181 0 0 chr2 132935348 132935481 -120321102 - FLAM_A SINE Alu 0 133 1 1597 264 34 3 chr2 132935823 132936210 -120320373 - MLT2E LTR ERVL -10 618 220 322 190 100 60 chr2 132936254 132936354 -120320229 - MLT2E LTR ERVL -559 104 1 497 197 137 0 chr2 132936449 132936566 -120320017 + MIR SINE MIR 93 225 -37 5349 190 94 24 chr2 132936675 132936908 -120319675 + L1MCa LINE L1 775 990 -5436 1002 87 31 0 chr2 132936908 132937035 -120319548 + FLAM_C SINE Alu 1 131 -2 5349 190 94 24 chr2 132937035 132938200 -120318383 + L1MCa LINE L1 990 2072 -4354 212 0 36 0 chr2 132938200 132938228 -120318355 + (CA)n Simple_repeat Simple_repeat 2 30 0 5349 190 94 24 chr2 132938228 132939344 -120317239 + L1MCa LINE L1 2072 3598 -2828 1685 71 24 0 chr2 132939345 132939556 -120317027 + AluY SINE Alu 83 298 -13 1260 135 0 0 chr2 132939583 132939768 -120316815 + AluSg/x SINE Alu 126 310 0 208 200 0 0 chr2 132939769 132939814 -120316769 + MER5B DNA MER1_type 134 178 0 235 272 74 12 chr2 132939815 132939849 -120316734 - MIR3 SINE MIR -49 159 129 3079 155 34 36 chr2 132939849 132940404 -120316179 - MLT2B3 LTR ERVL 0 554 1 235 272 74 12 chr2 132940404 132940450 -120316133 - MIR3 SINE MIR -79 129 74 300 202 292 33 chr2 132940769 132940900 -120315683 + MIR SINE MIR 8 169 -63 478 232 18 83 chr2 132940914 132941082 -120315501 + MER69A DNA AcHobo 20 176 -1 197 172 0 0 chr2 132941133 132941162 -120315421 + L2 LINE L2 3228 3256 -16 249 33 0 0 chr2 132944307 132944337 -120312246 + (CAGT)n Simple_repeat Simple_repeat 1 30 0 198 0 0 0 chr2 132944487 132944509 -120312074 + (CAGT)n Simple_repeat Simple_repeat 1 22 0 335 232 64 16 chr2 132944907 132945032 -120311551 + HAL1 LINE L1 114 244 -2263 306 271 120 47 chr2 132945165 132945464 -120311119 + HAL1 LINE L1 457 777 -1730 226 128 21 0 chr2 132945474 132945521 -120311062 + L1MD3 LINE L1 7938 7985 -10 767 167 0 36 chr2 132945535 132945673 -120310910 - FLAM_C SINE Alu 0 133 1 608 241 97 45 chr2 132945689 132945731 -120310852 + HAL1 LINE L1 1105 1143 -1364 2481 82 3 3 chr2 132945731 132946036 -120310547 + AluSp SINE Alu 1 305 -8 608 241 97 45 chr2 132946036 132946283 -120310300 + HAL1 LINE L1 1143 1409 -1098 23 33 0 0 chr2 132947004 132947034 -120309549 + GC_rich Low_complexity Low_complexity 1 30 0 238 152 10 152 chr2 132947731 132947830 -120308753 - MER5A DNA MER1_type -102 87 3 299 274 14 0 chr2 132949198 132949271 -120307312 + MIR3 SINE MIR 82 155 -53 184 267 199 38 chr2 132949607 132949738 -120306845 - L2 LINE L2 -222 3050 2899 895 262 16 24 chr2 132950664 132950912 -120305671 + MIR SINE MIR 16 261 -1 386 281 9 26 chr2 132950909 132951023 -120305560 - MIR SINE MIR -64 198 87 * 337 321 45 8 chr2 132951961 132952095 -120304488 - MIR SINE MIR -50 212 74 333 204 92 20 chr2 132952099 132952197 -120304386 - HsTC2 DNA Tc2 0 1898 1794 223 303 119 9 chr2 132952352 132952461 -120304122 - MIR SINE MIR -54 154 34 229 341 0 11 chr2 132953259 132953350 -120303233 - L2 LINE L2 -189 3083 2994 271 316 76 0 chr2 132954521 132954600 -120301983 + MIR SINE MIR 102 186 -76 25 0 0 0 chr2 132954609 132954634 -120301949 + AT_rich Low_complexity Low_complexity 1 25 0 1698 145 32 21 chr2 132954635 132954918 -120301665 - AluJo SINE Alu -26 286 1 4027 196 54 34 chr2 132955428 132955667 -120300916 - L1ME1 LINE L1 -6 6160 5927 2056 115 36 0 chr2 132955667 132955946 -120300637 - AluSx SINE Alu -23 289 1 4027 196 54 34 chr2 132955946 132957553 -120299030 - L1ME1 LINE L1 -239 5927 4295 225 267 33 0 chr2 132957568 132957628 -120298955 - MER81 DNA DNA 0 114 53 207 179 0 0 chr2 132959444 132959483 -120297100 + GA-rich Low_complexity Low_complexity 1 39 0 2276 105 3 0 chr2 132959529 132959825 -120296758 + AluSx SINE Alu 1 297 -15 2187 107 7 3 chr2 132960238 132960528 -120296055 - AluSx SINE Alu -21 291 1 1862 133 0 29 chr2 132960863 132961172 -120295411 - AluJb SINE Alu -12 300 1 208 233 8 58 chr2 132961950 132962070 -120294513 + (CCCG)n Simple_repeat Simple_repeat 4 117 0 192 183 0 49 chr2 132962142 132962224 -120294359 + G-rich Low_complexity Low_complexity 4 81 0 315 225 0 63 chr2 132962237 132962348 -120294235 + G-rich Low_complexity Low_complexity 2 105 0 338 247 24 94 chr2 132962572 132962742 -120293841 + MER112 DNA MER1_type 95 252 -8 1863 128 0 11 chr2 132962856 132963121 -120293462 - AluJb SINE Alu -23 289 28 24 0 0 0 chr2 132963485 132963509 -120293074 + AT_rich Low_complexity Low_complexity 1 24 0 519 180 180 0 chr2 132963511 132963622 -120292961 - FLAM_C SINE Alu -2 131 1 201 147 0 0 chr2 132963653 132963687 -120292896 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 790 78 8 31 chr2 132963687 132963816 -120292767 - L1PA13 LINE L1 0 6163 6038 1833 153 61 0 chr2 132963831 132964125 -120292458 - AluJb SINE Alu 0 312 1 454 249 66 140 chr2 132964898 132965340 -120291243 + MLT1L LTR MaLR 2 410 -205 3705 186 76 26 chr2 132965554 132966446 -120290137 - L1MC4a LINE L1 -191 7617 6681 358 282 59 47 chr2 132966996 132967166 -120289417 + MER112 DNA MER1_type 5 176 -84 226 232 36 0 chr2 132967172 132967228 -120289355 - MIR SINE MIR -61 147 90 258 238 150 0 chr2 132967647 132967727 -120288856 + MIR SINE MIR 84 175 -87 309 271 30 38 chr2 132968411 132968544 -120288039 + MIR SINE MIR 11 142 -120 269 285 65 49 chr2 132968618 132968741 -120287842 - MIR SINE MIR -118 144 20 210 302 23 12 chr2 132969375 132969461 -120287122 - MIR SINE MIR -37 225 139 995 215 200 23 chr2 132969468 132969920 -120286663 - L1ME1 LINE L1 -34 6132 5587 251 225 175 12 chr2 132969922 132970002 -120286581 - MIR SINE MIR -81 127 34 1359 233 163 1 chr2 132970237 132970764 -120285819 - L1MC4 LINE L1 -680 7362 6685 2553 86 0 6 chr2 132970967 132971280 -120285303 + AluSx SINE Alu 1 311 -1 27 29 0 0 chr2 132972748 132972782 -120283801 + AT_rich Low_complexity Low_complexity 1 34 0 1019 197 205 8 chr2 132972783 132973022 -120283561 - AluSg1 SINE Alu -21 288 3 4427 117 23 16 chr2 132973025 132973528 -120283055 - L1MA4A LINE L1 -15 6288 5775 2451 56 7 7 chr2 132973528 132973832 -120282751 - AluY SINE Alu -7 304 1 4427 117 23 16 chr2 132973832 132974096 -120282487 - L1MA4A LINE L1 -528 5775 5515 2311 94 7 3 chr2 132974097 132974396 -120282187 + AluSg SINE Alu 1 300 -10 1268 151 0 0 chr2 132974399 132974584 -120281999 + AluSg/x SINE Alu 124 308 -2 661 210 64 11 chr2 132975619 132975803 -120280780 - MLT1J LTR MaLR -289 181 1 2434 94 0 3 chr2 132975847 132976144 -120280439 - AluSp SINE Alu -17 296 1 2169 188 152 130 chr2 132976179 132976561 -120280022 + L1MC3 LINE L1 6702 7074 -711 333 238 0 49 chr2 132976561 132976664 -120279919 + MLT1F1 LTR MaLR 50 147 -402 2169 188 152 130 chr2 132976664 132976773 -120279810 + L1MC3 LINE L1 7074 7179 -606 1778 149 88 35 chr2 132976773 132977149 -120279434 + MSTD LTR MaLR 1 396 0 2169 188 152 130 chr2 132977149 132977502 -120279081 + L1MC3 LINE L1 7179 7670 -115 327 263 145 13 chr2 132977523 132977675 -120278908 - MSTA LTR MaLR 0 428 257 283 91 23 0 chr2 132977826 132977870 -120278713 - L1MCa LINE L1 -4762 1802 1758 * 2280 239 96 33 chr2 132977866 132978687 -120277896 - L1MCa LINE L1 -5172 873 1 2592 225 77 53 chr2 132978698 132979695 -120276888 - L1M4 LINE L1 -960 5186 4166 787 238 109 4 chr2 132979692 132979948 -120276635 - L1M4 LINE L1 -2578 3568 3286 * 2292 97 0 0 chr2 132979949 132980237 -120276346 - AluSc SINE Alu -21 288 1 1168 38 8 0 chr2 132980237 132980369 -120276214 - AluSc SINE Alu -176 133 1 1637 243 58 33 chr2 132980413 132980932 -120275651 + LTR55 LTR ERV 1 532 -16 2264 110 0 0 chr2 132980936 132981226 -120275357 - AluSx SINE Alu -22 290 1 2253 114 3 0 chr2 132983209 132983507 -120273076 + AluSq SINE Alu 1 299 -14 353 186 113 21 chr2 132983938 132984035 -120272548 - L1MC4 LINE L1 -1747 6295 6190 1108 167 76 14 chr2 132984058 132984268 -120272315 - AluJo SINE Alu -89 223 1 420 282 84 0 chr2 132984654 132984785 -120271798 - L2 LINE L2 -4 3268 3127 2364 97 3 7 chr2 132985254 132985564 -120271019 - AluSc SINE Alu 0 309 1 1065 88 225 0 chr2 132985864 132986046 -120270537 - MER30 DNA MER1_type 0 230 8 8840 196 76 45 chr2 132986080 132986688 -120269895 + L1MB7 LINE L1 2382 2970 -3214 769 165 8 15 chr2 132986688 132986821 -120269762 + FLAM_A SINE Alu 1 132 -1 8840 196 76 45 chr2 132986821 132987111 -120269472 + L1MB7 LINE L1 2970 3250 -2934 1173 139 54 163 chr2 132987111 132987443 -120269140 + AluJo SINE Alu 1 296 -6 8840 196 76 45 chr2 132987443 132987456 -120269127 + L1MB7 LINE L1 3250 3261 -2923 1601 164 4 15 chr2 132987456 132987730 -120268853 + AluJo SINE Alu 41 311 -1 8840 196 76 45 chr2 132987730 132988116 -120268467 + L1MB7 LINE L1 3261 3634 -2550 2326 91 3 3 chr2 132988116 132988412 -120268171 - AluSc SINE Alu -13 296 1 8840 196 76 45 chr2 132988412 132988923 -120267660 + L1MB7 LINE L1 3634 4128 -2056 2259 119 0 0 chr2 132988923 132989218 -120267365 + AluSx SINE Alu 1 295 -17 8840 196 76 45 chr2 132989218 132989497 -120267086 + L1MB7 LINE L1 4128 4397 -1787 923 152 26 0 chr2 132989497 132989648 -120266935 + FRAM SINE Alu 1 155 -11 8840 196 76 45 chr2 132989648 132989971 -120266612 + L1MB7 LINE L1 4397 4709 -1475 886 161 45 35 chr2 132989971 132990029 -120266554 - L1MC2 LINE L1 0 6344 6288 2020 146 0 22 chr2 132990029 132990345 -120266238 + AluJo SINE Alu 1 309 -3 886 161 45 35 chr2 132990345 132990485 -120266098 - L1MC2 LINE L1 -56 6288 6144 8840 196 76 45 chr2 132990485 132991753 -120264830 + L1MB7 LINE L1 4709 6183 -1 222 263 132 13 chr2 132992242 132992318 -120264265 + MIR SINE MIR 13 97 -165 2135 124 7 0 chr2 132992719 132993017 -120263566 + AluSx SINE Alu 1 300 -12 717 145 0 58 chr2 132993732 132993870 -120262713 + FLAM_C SINE Alu 1 130 -3 2238 129 19 19 chr2 132993877 132994241 -120262342 + THE1B LTR MaLR 1 364 0 529 270 176 36 chr2 132994331 132994553 -120262030 - MIR SINE MIR -9 253 1 282 267 60 35 chr2 132994755 132994871 -120261712 - MIR SINE MIR -74 134 16 805 181 8 0 chr2 132995398 132995525 -120261058 + FLAM_C SINE Alu 1 128 -5 433 326 128 5 chr2 132996541 132996759 -120259824 + MIR SINE MIR 8 252 -10 337 340 156 8 chr2 132996776 132997014 -120259569 + L2 LINE L2 3000 3272 0 1201 222 101 67 chr2 132997038 132997270 -120259313 - L2 LINE L2 -2 3311 3088 2221 114 0 10 chr2 132997270 132997576 -120259007 - AluSx SINE Alu -9 303 1 1201 222 101 67 chr2 132997576 132997820 -120258763 - L2 LINE L2 -225 3088 2819 233 263 217 34 chr2 132999039 132999214 -120257369 + MIR SINE MIR 1 207 -55 257 242 163 39 chr2 132999678 132999845 -120256738 + MIR3 SINE MIR 1 191 -65 196 171 24 0 chr2 132999888 132999929 -120256654 - L2 LINE L2 -78 3194 3153 503 88 0 0 chr2 133000763 133000831 -120255752 + U4 snRNA snRNA 1 68 -77 7333 185 86 87 chr2 133001254 133001332 -120255251 + L1MB3 LINE L1 1536 1613 -4806 1868 162 0 13 chr2 133001332 133001634 -120254949 - AluJb SINE Alu -14 298 1 7333 185 86 87 chr2 133001634 133002189 -120254394 + L1MB3 LINE L1 1613 2167 -4252 2475 80 0 13 chr2 133002189 133002502 -120254081 + AluSg SINE Alu 2 310 0 7333 185 86 87 chr2 133002502 133002915 -120253668 + L1MB3 LINE L1 2167 2579 -3840 324 48 0 0 chr2 133002915 133002957 -120253626 + (CA)n Simple_repeat Simple_repeat 2 43 0 7333 185 86 87 chr2 133002957 133003102 -120253481 + L1MB3 LINE L1 2579 2723 -3696 1907 143 0 20 chr2 133003102 133003395 -120253188 + AluJb SINE Alu 1 287 -25 7333 185 86 87 chr2 133003395 133005163 -120251420 + L1MB3 LINE L1 2723 4492 -1927 1275 163 35 0 chr2 133005163 133005366 -120251217 + AluJo SINE Alu 11 220 -92 7333 185 86 87 chr2 133005366 133007072 -120249511 + L1MB3 LINE L1 4492 6388 -31 898 174 12 29 chr2 133007089 133007261 -120249322 + FRAM SINE Alu 1 161 -15 549 256 64 14 chr2 133007332 133007551 -120249032 + L1MC4 LINE L1 7812 8041 -1 1153 262 107 57 chr2 133008529 133009209 -120247374 - MER21B LTR ERV1 -149 714 1 309 217 0 36 chr2 133009213 133009296 -120247287 - MER106B DNA MER1_type -944 115 36 208 218 77 51 chr2 133010194 133010272 -120246311 + MIR SINE MIR 19 98 -164 333 264 164 7 chr2 133011593 133011733 -120244850 + L1ME4a LINE L1 5943 6104 -17 538 150 120 45 chr2 133011870 133012003 -120244580 + FLAM_C SINE Alu 1 143 0 291 54 0 0 chr2 133012126 133012163 -120244420 + (TG)n Simple_repeat Simple_repeat 2 38 0 1274 157 40 5 chr2 133012163 133012361 -120244222 - AluJo SINE Alu -24 288 84 2265 84 0 34 chr2 133012535 133012856 -120243727 + AluY SINE Alu 1 310 -1 23 0 0 0 chr2 133012859 133012882 -120243701 + AT_rich Low_complexity Low_complexity 1 23 0 2175 89 24 0 chr2 133013244 133013537 -120243046 + AluY SINE Alu 11 310 -1 891 181 78 15 chr2 133015668 133015872 -120240711 - L1MD2 LINE L1 -22 6337 6121 2117 102 0 0 chr2 133016086 133016361 -120240222 - AluY SINE Alu -36 275 1 277 307 180 58 chr2 133016570 133017380 -120239203 + L2 LINE L2 2053 2961 -353 282 320 52 10 chr2 133017407 133017504 -120239079 + L2 LINE L2 3168 3268 -4 34 0 0 0 chr2 133018748 133018782 -120237801 + AT_rich Low_complexity Low_complexity 1 34 0 411 304 167 10 chr2 133019700 133019904 -120236679 - MIR SINE MIR -14 248 13 2300 81 0 7 chr2 133019959 133020255 -120236328 - AluY SINE Alu -17 294 1 2364 79 3 7 chr2 133020774 133021078 -120235505 + AluSq SINE Alu 1 303 -10 773 272 24 15 chr2 133021181 133021387 -120235196 + MIR SINE MIR 23 230 -32 292 263 11 53 chr2 133021411 133021506 -120235077 - MIR SINE MIR -150 112 22 798 103 0 89 chr2 133022625 133022771 -120233812 + FLAM_C SINE Alu 1 133 0 936 152 0 14 chr2 133022991 133023136 -120233447 + FLAM_C SINE Alu 1 143 0 2616 123 93 1 chr2 133024793 133025059 -120231524 + Tigger3(Golem) DNA MER2_type 1 241 -2787 321 26 0 0 chr2 133025059 133025097 -120231486 + (CA)n Simple_repeat Simple_repeat 1 38 0 1539 175 20 34 chr2 133025097 133025389 -120231194 - AluJo SINE Alu -24 288 1 2616 123 93 1 chr2 133025389 133025645 -120230938 + Tigger3(Golem) DNA MER2_type 240 3028 0 350 300 72 52 chr2 133026884 133027174 -120229409 - L1MC4a LINE L1 -1777 6291 5996 510 270 72 28 chr2 133027176 133027499 -120229084 - L1MC4a LINE L1 -593 5845 5532 2527 69 0 0 chr2 133027595 133027901 -120228682 - AluY SINE Alu -5 306 1 689 275 56 24 chr2 133028327 133028665 -120227918 + L1M4 LINE L1 4838 5186 -960 534 283 92 45 chr2 133028858 133029447 -120227136 - L1MDb LINE L1 -3615 2791 2213 238 224 0 45 chr2 133029715 133029782 -120226801 - L1MDb LINE L1 -4608 1798 1735 254 248 101 30 chr2 133029792 133029990 -120226593 - L1MDb LINE L1 -4869 1537 1326 263 233 68 0 chr2 133030139 133030212 -120226371 - L1MDb LINE L1 -5094 1302 1225 529 208 0 0 chr2 133030239 133030345 -120226238 - FLAM_A SINE Alu -17 125 20 309 159 0 58 chr2 133030367 133030473 -120226110 - L1MDb LINE L1 -5181 1225 1128 980 191 94 73 chr2 133031444 133031773 -120224810 - L1ME2 LINE L1 0 6164 5829 351 0 0 0 chr2 133032181 133032220 -120224363 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 2042 106 61 0 chr2 133034611 133034904 -120221679 + AluSx SINE Alu 1 311 -1 23 0 0 0 chr2 133035008 133035031 -120221552 + AT_rich Low_complexity Low_complexity 1 23 0 317 328 25 8 chr2 133036177 133036277 -120220306 + L2 LINE L2 3191 3295 -18 1559 148 139 3 chr2 133036277 133036594 -120219989 + MER46B DNA MER2_type 2 236 0 317 328 25 8 chr2 133036594 133036612 -120219971 + L2 LINE L2 3295 3311 -2 2361 89 0 7 chr2 133037939 133038243 -120218340 + AluSc SINE Alu 2 303 -6 1581 166 24 0 chr2 133039006 133039259 -120217324 - AluJo SINE Alu -15 297 39 461 259 19 57 chr2 133039351 133039509 -120217074 - MER5A DNA MER1_type 0 189 38 203 321 122 30 chr2 133039557 133039688 -120216895 + L2 LINE L2 2926 3068 -204 552 311 89 21 chr2 133039702 133039937 -120216646 + MIR SINE MIR 2 252 -10 2112 132 0 3 chr2 133041472 133041775 -120214808 + AluSx SINE Alu 5 306 -6 771 215 52 68 chr2 133042407 133042896 -120213687 + LTR28 LTR ERV1 1 1232 -141 1378 213 30 134 chr2 133042937 133043470 -120213113 + MER52A LTR ERV1 1252 1723 -32 383 259 82 48 chr2 133043512 133043659 -120212924 - L1ME4a LINE L1 -255 5866 5715 327 233 31 94 chr2 133043675 133043834 -120212749 + MER20B DNA MER1_type 1 149 -634 1190 274 155 12 chr2 133044110 133044613 -120211970 + L1MB7 LINE L1 11 585 -6274 942 161 109 0 chr2 133044674 133044848 -120211735 + AluSg/x SINE Alu 84 276 -34 678 250 75 18 chr2 133044901 133044989 -120211594 + L1MB7 LINE L1 3381 3463 -3494 1300 184 12 118 chr2 133044989 133045321 -120211262 + AluJo SINE Alu 1 297 -5 678 250 75 18 chr2 133045321 133045512 -120211071 + L1MB7 LINE L1 3463 3676 -3281 * 1714 259 64 3 chr2 133045490 133046070 -120210513 + L1MB7 LINE L1 5159 5773 -1184 2715 183 67 24 chr2 133046070 133046744 -120209839 + L1MB7 LINE L1 6287 6989 -6 1863 179 10 0 chr2 133046745 133047047 -120209536 + AluJb SINE Alu 1 305 -7 2357 97 0 13 chr2 133047070 133047380 -120209203 - AluSq SINE Alu -7 306 1 987 149 105 18 chr2 133047391 133047619 -120208964 + MER96B DNA MER1_type? 105 352 -65 231 36 0 0 chr2 133047984 133048012 -120208571 + (TG)n Simple_repeat Simple_repeat 1 28 0 2604 162 38 32 chr2 133048136 133048636 -120207947 + MLT1D LTR MaLR 1 503 -2 2469 86 0 0 chr2 133048673 133048977 -120207606 - AluSc SINE Alu -5 304 1 590 233 114 86 chr2 133049129 133049488 -120207095 + L1ME4a LINE L1 5514 5894 -227 2169 80 33 4 chr2 133049488 133049764 -120206819 + AluSg SINE Alu 1 284 -26 590 233 114 86 chr2 133049764 133049928 -120206655 + L1ME4a LINE L1 5894 6052 -69 1659 157 67 26 chr2 133049950 133050294 -120206289 - MER47A DNA MER2_type -8 358 1 951 284 125 36 chr2 133050639 133051087 -120205496 + L2 LINE L2 2824 3311 -2 1985 137 7 7 chr2 133051438 133051730 -120204853 + AluSx SINE Alu 1 292 -20 543 298 88 6 chr2 133052598 133052779 -120203804 + L2 LINE L2 3117 3312 -1 840 93 9 0 chr2 133052869 133052977 -120203606 - FLAM_C SINE Alu -11 132 24 1769 83 4 21 chr2 133053051 133053291 -120203292 - AluSq SINE Alu -16 297 62 1265 144 0 42 chr2 133053385 133053600 -120202983 - AluJ SINE Alu 0 312 107 704 103 19 0 chr2 133053661 133053768 -120202815 - AluJ SINE Alu -203 109 1 269 179 0 0 chr2 133053916 133053983 -120202600 - L1MA3 LINE L1 0 6305 6239 187 349 60 0 chr2 133054045 133054128 -120202455 + L2 LINE L2 3184 3271 -1 21 0 0 0 chr2 133054744 133054765 -120201818 + GC_rich Low_complexity Low_complexity 1 21 0 1746 202 158 13 chr2 133055583 133056058 -120200525 + MER92C LTR ERV1 8 551 -3 381 360 0 32 chr2 133057272 133057458 -120199125 + MIR3 SINE MIR 23 202 -6 662 212 8 0 chr2 133057521 133057639 -120198944 + MIR SINE MIR 72 190 -72 244 123 86 12 chr2 133057640 133057721 -120198862 + (TA)n Simple_repeat Simple_repeat 1 87 0 2275 121 0 0 chr2 133057764 133058061 -120198522 - AluSx SINE Alu -15 297 1 2774 132 39 0 chr2 133058061 133058502 -120198081 + LTR24 LTR ERV1 10 467 0 1140 266 83 13 chr2 133058814 133059201 -120197382 - MLT1J2 LTR MaLR -22 428 15 739 195 135 55 chr2 133060019 133060219 -120196364 + MER20 DNA MER1_type 4 219 0 521 267 73 42 chr2 133060515 133060706 -120195877 + MIR SINE MIR 23 219 -43 259 294 96 7 chr2 133061400 133061546 -120195037 + L1ME LINE L1 5623 5781 -340 1640 215 58 3 chr2 133062895 133063277 -120193306 - MER21B LTR ERV1 -107 756 354 459 208 67 0 chr2 133063317 133063437 -120193146 - MER21B LTR ERV1 -638 225 98 2215 60 18 25 chr2 133063489 133063790 -120192793 - AluY SINE Alu 0 300 2 385 205 0 36 chr2 133063791 133063874 -120192709 - MER21B LTR ERV1 -779 84 5 197 282 200 0 chr2 133064786 133064871 -120191712 - MIR SINE MIR -112 150 49 310 211 93 12 chr2 133065067 133065184 -120191399 - MIR SINE MIR -53 155 27 1245 206 185 19 chr2 133065516 133065943 -120190640 - LTR54B LTR ERV1 0 498 1 569 133 186 35 chr2 133066061 133066174 -120190409 + AluJb SINE Alu 3 132 -180 238 150 17 17 chr2 133066174 133066234 -120190349 + GA-rich Low_complexity Low_complexity 2 61 0 231 154 0 0 chr2 133066336 133066375 -120190208 + Alu SINE Alu 250 288 -11 1311 227 12 25 chr2 133066379 133066705 -120189878 + L1MB7 LINE L1 4541 4862 -1284 904 165 45 35 chr2 133066698 133066756 -120189827 - L1MC2 LINE L1 0 6344 6288 * 2011 146 0 22 chr2 133066756 133067072 -120189511 + AluJo SINE Alu 1 309 -3 904 165 45 35 chr2 133067072 133067213 -120189370 - L1MC2 LINE L1 -56 6288 6143 * 3778 170 73 31 chr2 133067207 133068479 -120188104 + L1MB7 LINE L1 4847 6183 -1 226 276 132 13 chr2 133068969 133069045 -120187538 + MIR SINE MIR 13 97 -165 2172 126 7 0 chr2 133069446 133069747 -120186836 + AluSx SINE Alu 1 303 -9 747 140 0 59 chr2 133070463 133070599 -120185984 + FLAM_C SINE Alu 5 132 -1 2309 129 19 19 chr2 133070604 133070968 -120185615 + THE1B LTR MaLR 1 364 0 529 270 176 36 chr2 133071058 133071280 -120185303 - MIR SINE MIR -9 253 1 337 343 157 8 chr2 133071372 133071608 -120184975 + L2 LINE L2 3002 3272 0 1278 222 101 67 chr2 133071632 133071864 -120184719 - L2 LINE L2 -2 3311 3088 2260 114 0 10 chr2 133071864 133072170 -120184413 - AluSx SINE Alu -9 303 1 1278 222 101 67 chr2 133072170 133072414 -120184169 - L2 LINE L2 -225 3088 2819 237 263 217 34 chr2 133073633 133073808 -120182775 + MIR SINE MIR 1 207 -55 267 243 163 39 chr2 133074272 133074439 -120182144 + MIR3 SINE MIR 1 191 -65 209 171 24 0 chr2 133074481 133074522 -120182061 - L2 LINE L2 -78 3194 3153 183 80 0 0 chr2 133075315 133075340 -120181243 + (GGA)n Simple_repeat Simple_repeat 3 27 0 329 252 92 34 chr2 133075355 133075474 -120181109 + L2 LINE L2 3147 3272 0 1143 126 66 0 chr2 133075887 133076070 -120180513 + MER3 DNA MER1_type 14 208 -1 2354 102 3 0 chr2 133076157 133076462 -120180121 - AluSx SINE Alu -6 306 1 381 267 185 27 chr2 133076484 133076630 -120179953 + MIR SINE MIR 57 225 -37 3916 98 46 18 chr2 133077292 133077753 -120178830 - L1PB2 LINE L1 -10 6141 5658 2529 88 0 0 chr2 133077753 133078061 -120178522 - AluSx SINE Alu -4 308 1 3916 98 46 18 chr2 133078061 133078203 -120178380 - L1PB2 LINE L1 -493 5658 5521 1539 167 11 93 chr2 133080171 133080645 -120175938 - LTR5 LTR ERVK 0 969 535 4434 131 9 11 chr2 133082661 133083316 -120173267 - LTR5 LTR ERVK -315 654 1 228 232 14 0 chr2 133083436 133083505 -120173078 + CT-rich Low_complexity Low_complexity 1 70 0 2087 75 0 85 chr2 133083519 133083837 -120172746 - AluY SINE Alu -20 291 1 1037 201 0 16 chr2 133083837 133084026 -120172557 - AluJo SINE Alu -6 306 121 24 67 0 0 chr2 133084026 133084071 -120172512 + AT_rich Low_complexity Low_complexity 1 45 0 386 190 13 0 chr2 133084095 133084174 -120172409 + MER116 DNA Mariner 1 80 0 2256 91 0 49 chr2 133084180 133084342 -120172241 - AluSg SINE Alu -17 293 152 2681 46 0 0 chr2 133084342 133084646 -120171937 - AluY SINE Alu -7 304 1 2256 91 0 49 chr2 133084646 133084791 -120171792 - AluSg SINE Alu -158 152 1 407 289 122 5 chr2 133084889 133085086 -120171497 - L1MC/D LINE L1 -2065 5743 5524 277 315 47 16 chr2 133085993 133086120 -120170463 + MIR SINE MIR 99 229 -33 700 199 6 6 chr2 133086528 133086704 -120169879 + (TCCA)n Simple_repeat Simple_repeat 1 176 0 681 217 0 0 chr2 133086716 133086896 -120169687 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 200 159 0 23 chr2 133086922 133086966 -120169617 + (TCCA)n Simple_repeat Simple_repeat 4 46 0 263 311 201 30 chr2 133087200 133087528 -120169055 - L2 LINE L2 -368 2946 2563 3143 231 43 5 chr2 133087539 133088179 -120168404 - L1MEc LINE L1 -2449 3766 3081 2419 83 3 0 chr2 133088179 133088479 -120168104 - AluSg SINE Alu -9 301 1 3143 231 43 5 chr2 133088479 133088723 -120167860 - L1MEc LINE L1 -3134 3081 2848 615 262 29 6 chr2 133088723 133088920 -120167663 - L1MEc LINE L1 -3662 2553 2348 324 70 0 0 chr2 133088921 133088964 -120167619 + (TTTC)n Simple_repeat Simple_repeat 3 45 0 246 204 0 130 chr2 133089039 133089090 -120167493 - L1MEc LINE L1 -3993 2403 2372 723 137 73 0 chr2 133089090 133089214 -120167369 - L1PA16 LINE L1 -9 6157 6025 246 204 0 130 chr2 133089214 133089270 -120167313 - L1MEc LINE L1 -4024 2372 2310 387 278 81 37 chr2 133089347 133089620 -120166963 - L2 LINE L2 -893 2421 2137 1934 142 28 0 chr2 133090049 133090337 -120166246 + AluSx SINE Alu 1 296 -16 762 205 6 26 chr2 133090645 133090795 -120165788 - MLT1F1 LTR MaLR 0 567 421 851 153 16 116 chr2 133090795 133091037 -120165546 - MLT1B LTR MaLR 0 390 173 987 213 150 3 chr2 133091047 133091395 -120165188 - MLT1F1 LTR MaLR -140 402 1 388 100 29 14 chr2 133091936 133092006 -120164577 - L1MA6 LINE L1 0 6300 6230 283 309 92 37 chr2 133092655 133092813 -120163770 + MIR SINE MIR 4 169 -67 11163 183 13 15 chr2 133092915 133093823 -120162760 - L1PBa LINE L1 -1384 5478 4571 216 30 0 30 chr2 133093823 133093856 -120162727 + (TTTA)n Simple_repeat Simple_repeat 2 180 0 2309 96 4 0 chr2 133093856 133094137 -120162446 - AluSp SINE Alu -29 284 3 11163 183 13 15 chr2 133094137 133094715 -120161868 - L1PBa LINE L1 -2290 4572 3995 2259 101 10 3 chr2 133094715 133095012 -120161571 - AluSq SINE Alu -14 299 1 11163 183 13 15 chr2 133095012 133097386 -120159197 - L1PBa LINE L1 -2867 3995 1560 5503 135 4 37 chr2 133097389 133098763 -120157820 + L1PB1 LINE L1 4771 6099 -52 213 314 0 14 chr2 133098951 133099021 -120157562 + MIR SINE MIR 25 93 -115 235 320 78 10 chr2 133099312 133099415 -120157168 - L2 LINE L2 -4 3268 3159 1941 148 30 3 chr2 133099781 133100084 -120156499 - AluJb SINE Alu -1 311 1 1926 97 23 15 chr2 133101036 133101295 -120155288 - AluSx SINE Alu -18 294 34 436 270 101 40 chr2 133101403 133101551 -120155032 - MIR SINE MIR -72 190 34 1087 238 57 37 chr2 133101556 133101993 -120154590 - MLT1B LTR MaLR -11 455 4 1723 136 58 58 chr2 133102057 133102242 -120154341 - AluSg SINE Alu -1 309 122 2358 100 3 0 chr2 133102242 133102551 -120154032 - AluSg SINE Alu 0 310 1 1723 136 58 58 chr2 133102551 133102674 -120153909 - AluSg SINE Alu -187 123 1 192 77 0 0 chr2 133103770 133103796 -120152787 + (GGAGA)n Simple_repeat Simple_repeat 1 26 0 698 214 0 0 chr2 133106888 133107019 -120149564 + FLAM_C SINE Alu 2 132 -1 282 29 0 0 chr2 133107428 133107463 -120149120 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 603 256 92 22 chr2 133107469 133107742 -120148841 - L2 LINE L2 -20 3293 3002 267 272 61 82 chr2 133107761 133107908 -120148675 - MIR SINE MIR -72 190 47 2301 97 0 7 chr2 133108380 133108678 -120147905 + AluSq SINE Alu 1 296 -17 2325 119 0 0 chr2 133108691 133108993 -120147590 + AluSx SINE Alu 1 302 -10 299 194 352 0 chr2 133108996 133109104 -120147479 + L1MC5 LINE L1 7730 7875 -86 183 280 40 0 chr2 133109107 133109157 -120147426 - MER5A DNA MER1_type -10 179 128 582 352 28 4 chr2 133109994 133110247 -120146336 - LTR16B LTR ERVL -18 446 188 2680 210 56 62 chr2 133110350 133111234 -120145349 - L1ME1 LINE L1 -1 6165 5284 2549 84 3 0 chr2 133111234 133111545 -120145038 - AluSp SINE Alu -1 312 1 2680 210 56 62 chr2 133111545 133111850 -120144733 - L1ME1 LINE L1 -882 5284 4979 2113 132 7 0 chr2 133111902 133112197 -120144386 + AluSx SINE Alu 1 297 -15 571 169 0 32 chr2 133112207 133112361 -120144222 + CT-rich Low_complexity Low_complexity 3 151 0 1230 235 40 15 chr2 133112380 133112708 -120143875 - L1ME1 LINE L1 -1198 4948 4613 404 244 98 0 chr2 133112775 133112898 -120143685 + MER103 DNA DNA 31 165 -1 332 264 146 33 chr2 133112938 133113150 -120143433 - MER112 DNA MER1_type -12 248 13 201 351 49 27 chr2 133113249 133113434 -120143149 + L2 LINE L2 2673 2861 -453 1940 140 7 24 chr2 133114017 133114310 -120142273 + AluSx SINE Alu 1 288 -24 740 216 46 0 chr2 133114503 133114656 -120141927 + MER45A DNA AcHobo 17 176 -2 543 225 51 0 chr2 133114925 133115063 -120141520 - MIR SINE MIR -55 207 63 1154 171 0 6 chr2 133115488 133115664 -120140919 - AluJo SINE Alu -115 197 23 1394 175 0 0 chr2 133115766 133115977 -120140606 + AluJo SINE Alu 86 296 -16 185 278 19 0 chr2 133117542 133117596 -120138987 + L2 LINE L2 3217 3271 -1 205 318 0 0 chr2 133117647 133117713 -120138870 - MIR SINE MIR -81 127 62 321 317 58 64 chr2 133118420 133119045 -120137538 + L1MEd LINE L1 593 1213 -4906 298 290 75 0 chr2 133119052 133119159 -120137424 + L1M4 LINE L1 4872 4986 -1160 2073 123 7 3 chr2 133119339 133119650 -120136933 - AluSq SINE Alu 0 312 1 189 238 32 16 chr2 133120005 133120068 -120136515 - L2 LINE L2 -646 2668 2605 205 282 105 8 chr2 133121842 133121966 -120134617 + MIR SINE MIR 16 151 -111 260 248 132 0 chr2 133124304 133124425 -120132158 + MIR3 SINE MIR 5 141 -67 4671 166 55 1 chr2 133124862 133126005 -120130578 - L1MB8 LINE L1 -5 6173 4966 2153 139 10 45 chr2 133127095 133127321 -120129262 - MLT1B LTR MaLR 0 390 183 2442 110 0 0 chr2 133127321 133127631 -120128952 - AluSg SINE Alu 0 310 1 2153 139 10 45 chr2 133127631 133127808 -120128775 - MLT1B LTR MaLR -207 183 1 903 141 11 11 chr2 133128450 133128627 -120127956 + (TGGG)n Simple_repeat Simple_repeat 4 180 0 903 183 4 0 chr2 133128650 133129158 -120127425 + (TGGG)n Simple_repeat Simple_repeat 1 510 0 850 191 10 5 chr2 133129305 133129730 -120126853 + (TGGG)n Simple_repeat Simple_repeat 1 427 0 184 300 43 43 chr2 133130100 133130170 -120126413 - MIR SINE MIR -107 155 86 202 326 41 0 chr2 133130195 133130293 -120126290 + MIR SINE MIR 44 145 -63 1863 132 52 31 chr2 133130680 133130967 -120125616 + AluJo SINE Alu 3 295 -17 231 244 236 8 chr2 133131200 133131323 -120125260 + MIR SINE MIR 42 192 -70 2348 90 0 13 chr2 133131875 133132187 -120124396 + AluSx SINE Alu 1 308 -4 210 196 20 20 chr2 133132834 133132885 -120123698 + CT-rich Low_complexity Low_complexity 1 51 0 9064 127 11 2 chr2 133134358 133135841 -120120742 - L1P LINE L1 -2122 4024 2528 611 133 26 0 chr2 133137032 133137145 -120119438 - L1MD2 LINE L1 -3 6356 6241 9946 213 60 24 chr2 133137145 133137366 -120119217 - L1MD1 LINE L1 -185 6451 6239 1935 144 0 11 chr2 133137366 133137692 -120118891 - AluJb SINE Alu 0 323 1 9946 213 60 24 chr2 133137692 133140183 -120116400 - L1MD1 LINE L1 -397 6239 3839 2344 91 3 0 chr2 133140183 133140492 -120116091 + AluSq SINE Alu 1 310 0 9946 213 60 24 chr2 133140492 133141526 -120115057 - L1MD1 LINE L1 -2797 3839 2543 764 218 76 10 chr2 133141526 133141723 -120114860 + MER6B DNA MER2_type 1 210 0 9946 213 60 24 chr2 133141723 133142120 -120114463 - L1MD1 LINE L1 -4093 2543 2162 1879 173 6 13 chr2 133142120 133142432 -120114151 + AluJo SINE Alu 1 310 -2 11497 116 19 19 chr2 133142438 133142476 -120114107 - Tigger1 DNA MER2_type -588 1830 1793 2033 150 0 3 chr2 133142476 133142769 -120113814 + AluJb SINE Alu 6 297 -15 11497 116 19 19 chr2 133142769 133143606 -120112977 - Tigger1 DNA MER2_type -625 1793 957 2367 94 0 3 chr2 133143606 133143904 -120112679 + AluSg SINE Alu 1 297 -13 11497 116 19 19 chr2 133143904 133144857 -120111726 - Tigger1 DNA MER2_type -1460 958 1 2149 122 3 3 chr2 133145069 133145372 -120111211 + AluSq SINE Alu 1 303 -10 333 361 54 0 chr2 133146292 133146422 -120110161 - MIR SINE MIR -108 154 18 202 320 27 13 chr2 133146728 133146803 -120109780 - MIR SINE MIR -7 255 180 186 327 50 10 chr2 133148214 133148315 -120108268 + MIR3 SINE MIR 96 200 -8 282 352 150 9 chr2 133150066 133150293 -120106290 - MIR SINE MIR 0 262 4 1592 178 132 12 chr2 133150647 133151108 -120105475 - MLT1F1 LTR MaLR 0 567 2 215 338 36 36 chr2 133151671 133151810 -120104773 + MIR3 SINE MIR 8 146 -62 211 327 32 44 chr2 133152064 133152195 -120104388 + MIR SINE MIR 24 155 -60 2373 244 56 43 chr2 133152853 133153800 -120102783 - L1ME LINE L1 -4918 1088 221 315 320 56 8 chr2 133154709 133154834 -120101749 - L2 LINE L2 -2 3270 3140 433 113 0 0 chr2 133155016 133155078 -120101505 - LTR3b LTR ERVK -1 499 438 2098 172 34 61 chr2 133155078 133155519 -120101064 - LTR3 LTR ERVK 0 429 1 439 66 0 0 chr2 133155534 133155595 -120100988 - HERVK14 LTR ERVK -62 5883 5823 2012 124 50 42 chr2 133155595 133156013 -120100570 - HERVK14 LTR ERVK -388 5557 3004 4798 204 29 1 chr2 133156013 133156965 -120099618 - HERVK14 LTR ERVK -4940 2303 1325 468 231 0 29 chr2 133156958 133157062 -120099521 - HERVK14 LTR ERVK -6563 680 580 * 466 157 96 170 chr2 133157120 133157237 -120099346 - HERVK14 LTR ERVK -6977 266 173 2813 13 0 0 chr2 133157237 133157551 -120099032 - AluYb8 SINE Alu -4 314 1 466 157 96 170 chr2 133157551 133157662 -120098921 - HERVK14 LTR ERVK -7070 173 55 357 175 0 0 chr2 133157917 133157980 -120098603 - LTR3b LTR ERVK 0 500 438 2178 180 23 50 chr2 133157980 133158419 -120098164 - LTR3 LTR ERVK 0 429 3 237 358 165 4 chr2 133158480 133158740 -120097843 - L2 LINE L2 -526 2788 2487 244 222 89 15 chr2 133158740 133158875 -120097708 + (TTGG)n Simple_repeat Simple_repeat 4 148 0 236 231 83 18 chr2 133158905 133159074 -120097509 + (GGTTG)n Simple_repeat Simple_repeat 1 180 0 * 322 156 88 12 chr2 133158952 133159112 -120097471 + (TGGG)n Simple_repeat Simple_repeat 3 174 0 197 345 17 35 chr2 133159168 133159284 -120097299 - L2 LINE L2 -814 2500 2387 646 241 54 0 chr2 133159289 133159455 -120097128 - MER63A DNA MER1_type -35 175 1 207 182 36 55 chr2 133160344 133160399 -120096184 + MIR SINE MIR 93 146 -62 2265 101 10 0 chr2 133161003 133161310 -120095273 - AluSx SINE Alu -2 310 1 254 294 117 49 chr2 133161484 133161647 -120094936 - L1ME LINE L1 -465 5656 5483 287 346 59 0 chr2 133164338 133164474 -120092109 + MIR SINE MIR 2 145 -117 2181 108 7 0 chr2 133166246 133166542 -120090041 + AluSx SINE Alu 1 298 -14 236 261 112 90 chr2 133167714 133167848 -120088735 - MIR SINE MIR -102 160 24 297 0 0 0 chr2 133168293 133168326 -120088257 + (GGGTG)n Simple_repeat Simple_repeat 3 35 0 263 299 26 0 chr2 133168429 133168506 -120088077 + MIR3 SINE MIR 90 168 -40 326 213 41 23 chr2 133168627 133168735 -120087848 - MIR SINE MIR -63 145 43 262 341 34 0 chr2 133168962 133169050 -120087533 - MIR SINE MIR -64 198 108 190 259 165 12 chr2 133169234 133169319 -120087264 + MIR SINE MIR 48 145 -63 207 288 17 0 chr2 133169731 133169790 -120086793 + L2 LINE L2 3242 3301 -12 275 304 163 18 chr2 133169947 133170174 -120086409 - L2 LINE L2 -7 3265 3006 188 285 89 32 chr2 133170329 133170452 -120086131 - MIR3 SINE MIR -78 130 1 272 278 21 10 chr2 133170661 133170758 -120085825 + (CACCC)n Simple_repeat Simple_repeat 3 100 0 267 231 62 0 chr2 133171719 133171784 -120084799 + MIR SINE MIR 82 150 -112 189 278 63 48 chr2 133174661 133174787 -120081796 - L2 LINE L2 -208 3064 2937 193 137 59 0 chr2 133177622 133177673 -120078910 + CT-rich Low_complexity Low_complexity 4 57 0 217 338 12 25 chr2 133178846 133179006 -120077577 + G-rich Low_complexity Low_complexity 5 162 0 188 309 100 9 chr2 133179438 133179548 -120077035 + L2 LINE L2 2857 2976 -337 564 264 80 24 chr2 133184831 133185043 -120071540 + MIR SINE MIR 22 245 -17 270 214 14 14 chr2 133186909 133186979 -120069604 + MER45 DNA AcHobo 1510 1579 -2 195 336 23 70 chr2 133187068 133187196 -120069387 + MIR SINE MIR 35 156 -106 1990 92 25 65 chr2 133188360 133188685 -120067898 + AluJb SINE Alu 1 312 0 431 28 69 0 chr2 133188685 133188757 -120067826 + G-rich Low_complexity Low_complexity 2 78 0 346 300 55 0 chr2 133188760 133188870 -120067713 + L1M4 LINE L1 3082 3197 -2949 462 18 0 0 chr2 133188899 133188954 -120067629 + (GGAA)n Simple_repeat Simple_repeat 4 58 0 261 347 84 32 chr2 133193016 133193206 -120063377 - L2 LINE L2 -869 2445 2246 1832 104 0 57 chr2 133194316 133194615 -120061968 - L1PA4 LINE L1 0 6155 5874 407 356 69 0 chr2 133194852 133195026 -120061557 - MIR SINE MIR -57 205 20 257 241 0 0 chr2 133195248 133195306 -120061277 + MIR SINE MIR 81 138 -124 5591 154 53 5 chr2 133197412 133198408 -120058175 + MSTA-int LTR MaLR 608 1651 0 2638 123 64 12 chr2 133198408 133198579 -120058004 + MSTA LTR MaLR 1 162 -266 2070 121 7 3 chr2 133198579 133198876 -120057707 + AluSx SINE Alu 1 298 -14 2638 123 64 12 chr2 133198876 133199111 -120057472 + MSTA LTR MaLR 162 428 0 284 194 9 12 chr2 133199112 133199192 -120057391 + L1MCa LINE L1 1211 1343 -5041 28 0 0 0 chr2 133199197 133199225 -120057358 + AT_rich Low_complexity Low_complexity 1 28 0 1390 212 0 38 chr2 133199234 133199526 -120057057 - AluJo SINE Alu -31 281 1 1331 267 33 39 chr2 133199526 133200154 -120056429 + L1MCa LINE L1 1330 2100 -4463 2687 212 38 77 chr2 133200202 133200448 -120056135 + L1M4 LINE L1 3692 3946 -2200 2183 116 0 0 chr2 133200448 133200742 -120055841 - AluSg SINE Alu -16 294 1 2687 212 38 77 chr2 133200742 133200878 -120055705 + L1M4 LINE L1 3946 4086 -2060 1583 152 0 45 chr2 133200878 133201167 -120055416 - AluJo SINE Alu -26 286 11 2687 212 38 77 chr2 133201167 133201676 -120054907 + L1M4 LINE L1 4086 4549 -1597 1013 198 42 0 chr2 133201667 133201859 -120054724 - L1MD2 LINE L1 -328 6031 5832 * 883 184 48 44 chr2 133201863 133202065 -120054518 - L1MDa LINE L1 -4089 2451 2246 2022 196 91 39 chr2 133202065 133202559 -120054024 - MLT2B1 LTR ERVL 0 520 1 883 184 48 44 chr2 133202559 133202606 -120053977 - L1MDa LINE L1 -4294 2246 2201 * 1293 240 118 31 chr2 133202585 133203035 -120053548 - L1MDa LINE L1 -5903 818 330 2310 90 7 0 chr2 133203115 133203416 -120053167 + AluSq SINE Alu 1 303 -10 1939 143 0 7 chr2 133203418 133203719 -120052864 - AluSx SINE Alu -13 299 1 584 169 6 44 chr2 133203719 133203879 -120052704 + Charlie1 DNA MER1_type 2607 2760 -1 647 291 35 25 chr2 133203881 133204080 -120052503 - MIR SINE MIR -60 202 2 1685 220 39 48 chr2 133204491 133204904 -120051679 - LTR2 LTR ERV1 0 449 41 850 183 0 43 chr2 133205057 133205221 -120051362 - FRAM SINE Alu -2 174 18 859 185 0 29 chr2 133205454 133205627 -120050956 + AluJo SINE Alu 121 288 -24 899 206 0 0 chr2 133206022 133206187 -120050396 + AluJb SINE Alu 147 311 -1 634 107 0 27 chr2 133206204 133206316 -120050267 + (GAAA)n Simple_repeat Simple_repeat 4 112 0 28 48 0 0 chr2 133206471 133206513 -120050070 + AT_rich Low_complexity Low_complexity 1 42 0 909 196 0 32 chr2 133207923 133208112 -120048471 - FRAM SINE Alu 0 176 1 239 229 21 21 chr2 133209855 133209951 -120046632 + L2 LINE L2 2483 2578 -736 1615 238 74 8 chr2 133209952 133210343 -120046240 + MER63B DNA MER1_type 2 418 -18 547 306 51 69 chr2 133210343 133210464 -120046119 + L2 LINE L2 2593 2715 -599 2245 84 10 3 chr2 133210464 133210774 -120045809 - AluSx SINE Alu 0 312 1 547 306 51 69 chr2 133210774 133211044 -120045539 + L2 LINE L2 2715 2977 -337 508 221 83 55 chr2 133211901 133212082 -120044501 - MIR SINE MIR -62 200 15 1576 129 51 37 chr2 133212171 133212466 -120044117 + AluJb SINE Alu 13 311 -1 4720 138 0 19 chr2 133214098 133214799 -120041784 + LTR12 LTR ERV1 1 688 0 253 241 0 0 chr2 133215865 133215923 -120040660 - MIR SINE MIR -124 138 81 360 356 69 0 chr2 133216146 133216320 -120040263 + MIR SINE MIR 20 205 -57 636 200 8 8 chr2 133216558 133216688 -120039895 + L1PA4 LINE L1 5874 6003 -152 267 363 13 25 chr2 133216696 133216853 -120039730 + C-rich Low_complexity Low_complexity 1 155 0 4415 189 72 36 chr2 133217086 133217218 -120039365 + L1MB7 LINE L1 4693 4819 -1365 1567 174 40 4 chr2 133217218 133217494 -120039089 + AluJb SINE Alu 1 286 -26 4415 189 72 36 chr2 133217494 133217829 -120038754 + L1MB7 LINE L1 4819 5140 -1044 2194 94 0 13 chr2 133217829 133218127 -120038456 + AluSx SINE Alu 1 294 -18 4415 189 72 36 chr2 133218127 133219047 -120037536 + L1MB7 LINE L1 5140 6184 0 2034 124 0 10 chr2 133219542 133219841 -120036742 + AluSg SINE Alu 1 296 -14 351 262 74 40 chr2 133219922 133220071 -120036512 - MER63A DNA MER1_type 0 210 57 205 305 234 0 chr2 133220538 133220679 -120035904 + MIR3 SINE MIR 34 207 -1 235 148 20 59 chr2 133223663 133223764 -120032819 + G-rich Low_complexity Low_complexity 5 101 0 281 254 14 0 chr2 133226059 133226130 -120030453 + L1M4 LINE L1 3743 3814 -2332 1125 193 4 75 chr2 133226165 133226445 -120030138 + L1MB8 LINE L1 2 261 -6281 522 252 32 32 chr2 133226467 133226582 -120030001 + L1MB8 LINE L1 3837 3951 -2693 1940 145 40 32 chr2 133226582 133226954 -120029629 - THE1C LTR MaLR 0 375 1 522 252 32 32 chr2 133226954 133227084 -120029499 + L1MB8 LINE L1 3950 4082 -2562 1149 129 32 5 chr2 133227090 133227276 -120029307 + AluSg/x SINE Alu 119 309 -1 3606 199 95 29 chr2 133227285 133228341 -120028242 + L1MB8 LINE L1 4082 5206 -1438 2255 119 0 0 chr2 133228342 133228654 -120027929 + AluSx SINE Alu 1 312 0 256 333 81 0 chr2 133228777 133228888 -120027695 + AluSg SINE Alu 5 124 -176 227 156 25 66 chr2 133230046 133230168 -120026415 + C-rich Low_complexity Low_complexity 5 121 0 2426 202 75 40 chr2 133230960 133231060 -120025523 + L1MB8 LINE L1 5214 5309 -1373 1681 161 29 4 chr2 133231060 133231339 -120025244 + AluJb SINE Alu 1 286 -26 2426 202 75 40 chr2 133231339 133231674 -120024909 + L1MB8 LINE L1 5309 5631 -1051 2194 94 0 13 chr2 133231674 133231972 -120024611 + AluSx SINE Alu 1 294 -18 2426 202 75 40 chr2 133231972 133232878 -120023705 + L1MB8 LINE L1 5631 6632 -50 1868 98 0 11 chr2 133233506 133233783 -120022800 - AluY SINE Alu -36 275 2 2179 119 0 0 chr2 133233980 133234283 -120022300 + AluSx SINE Alu 1 303 -9 1454 159 89 4 chr2 133234291 133234561 -120022022 + AluJb SINE Alu 1 293 -19 1620 159 6 52 chr2 133235165 133235491 -120021092 - AluJb SINE Alu -1 311 1 1763 93 8 8 chr2 133235884 133236130 -120020453 - AluSx SINE Alu -19 293 48 687 288 140 15 chr2 133236711 133237111 -120019472 - L2 LINE L2 -55 3258 2809 757 210 96 120 chr2 133237188 133237512 -120019071 + L1ME2 LINE L1 5839 6154 -10 229 213 16 16 chr2 133237550 133237611 -120018972 + L1MC4 LINE L1 7826 7886 -156 643 148 0 82 chr2 133237638 133237760 -120018823 + FLAM_A SINE Alu 11 122 -20 385 271 109 21 chr2 133237912 133238104 -120018479 - L2 LINE L2 -623 2691 2483 1863 98 8 0 chr2 133239752 133240007 -120016576 - AluSq SINE Alu -9 304 48 687 288 140 15 chr2 133240588 133240988 -120015595 - L2 LINE L2 -55 3258 2809 757 210 96 120 chr2 133241065 133241389 -120015194 + L1ME2 LINE L1 5839 6154 -10 229 213 16 16 chr2 133241427 133241488 -120015095 + L1MC4 LINE L1 7826 7886 -156 643 148 0 82 chr2 133241515 133241637 -120014946 + FLAM_A SINE Alu 11 122 -20 385 271 109 21 chr2 133241789 133241981 -120014602 - L2 LINE L2 -623 2691 2483 863 197 5 32 chr2 133243642 133243830 -120012753 + FRAM SINE Alu 1 176 0 317 120 20 0 chr2 133245070 133245120 -120011463 + Alu SINE Alu 238 288 -12 1974 107 46 0 chr2 133245127 133245407 -120011176 + AluSx SINE Alu 1 293 -19 1705 93 0 0 chr2 133245584 133245809 -120010774 - AluSx SINE Alu -87 225 1 402 310 110 52 chr2 133245882 133245925 -120010658 + L1MC4a LINE L1 6130 6169 -1639 1555 194 0 10 chr2 133245925 133246229 -120010354 + AluJb SINE Alu 3 303 -9 402 310 110 52 chr2 133246229 133246475 -120010108 + L1MC4a LINE L1 6169 6436 -1372 1878 128 49 0 chr2 133246525 133246813 -120009770 + AluSx SINE Alu 1 302 -10 637 231 157 22 chr2 133246813 133247042 -120009541 + L1MC4a LINE L1 6572 6831 -977 918 146 0 0 chr2 133247053 133247204 -120009379 + FRAM SINE Alu 25 175 -1 591 249 151 50 chr2 133247222 133247267 -120009316 + L1MC4 LINE L1 7601 7640 -402 2278 67 34 0 chr2 133247267 133247565 -120009018 + AluY SINE Alu 1 308 -3 591 249 151 50 chr2 133247565 133247916 -120008667 + L1MC4 LINE L1 7640 8037 -5 366 283 164 31 chr2 133247889 133248207 -120008376 + L1MC4 LINE L1 7049 7408 -634 * 1777 150 6 13 chr2 133248297 133248611 -120007972 - AluJb SINE Alu 0 312 1 378 214 51 20 chr2 133248612 133248710 -120007873 + L1MC5 LINE L1 7278 7378 -583 842 194 17 11 chr2 133249179 133249354 -120007229 + AluJb SINE Alu 120 295 -17 44 0 0 0 chr2 133249354 133249398 -120007185 + AT_rich Low_complexity Low_complexity 1 44 0 2261 91 10 0 chr2 133249428 133249736 -120006847 - AluSx SINE Alu -1 311 1 400 286 107 19 chr2 133250035 133250241 -120006342 + L1MC4 LINE L1 7802 8025 -17 2032 109 10 10 chr2 133250241 133250535 -120006048 - AluSq SINE Alu -19 294 1 828 179 0 0 chr2 133251085 133251219 -120005364 + FRAM SINE Alu 38 171 -5 337 266 29 28 chr2 133251466 133251613 -120004970 - MIR SINE MIR -65 143 20 1025 81 0 7 chr2 133251842 133251978 -120004605 + AluSq/x SINE Alu 1 135 -178 2461 49 0 7 chr2 133251978 133252285 -120004298 + AluY SINE Alu 1 305 -6 2485 62 0 0 chr2 133252657 133252964 -120003619 - AluSx SINE Alu -5 307 1 243 188 0 0 chr2 133253271 133253319 -120003264 + (TA)n Simple_repeat Simple_repeat 1 48 0 1319 204 136 9 chr2 133254900 133255239 -120001344 + L1ME3 LINE L1 5556 5937 -225 664 214 68 73 chr2 133255284 133255490 -120001093 + AluJo SINE Alu 84 288 -24 417 257 165 18 chr2 133255496 133255714 -120000869 + L1ME4a LINE L1 5615 5864 -257 1136 169 29 45 chr2 133255760 133255885 -120000698 - AluJo SINE Alu -73 239 118 1419 170 105 56 chr2 133255885 133256314 -120000269 + LTR7 LTR ERV1 1 450 0 1136 169 29 45 chr2 133256314 133256431 -120000152 - AluJo SINE Alu -194 118 1 377 262 51 51 chr2 133256847 133257061 -119999522 + L1MC5 LINE L1 7362 7575 -386 2327 91 0 0 chr2 133257117 133257424 -119999159 - AluSx SINE Alu -5 307 1 1303 221 129 39 chr2 133257504 133257938 -119998645 + L1MEc LINE L1 330 802 -5919 942 164 56 52 chr2 133257933 133257980 -119998603 + L1MEc LINE L1 2201 2246 -4294 * 1912 186 103 51 chr2 133257980 133258474 -119998109 + MLT2B1 LTR ERVL 1 520 0 942 164 56 52 chr2 133258474 133258676 -119997907 + L1MEc LINE L1 2246 2451 -4089 1056 198 42 0 chr2 133258680 133258872 -119997711 + L1MD2 LINE L1 5832 6031 -328 2815 204 42 82 chr2 133258873 133259372 -119997211 - L1M4 LINE L1 -1607 4539 4022 1551 152 0 45 chr2 133259372 133259661 -119996922 + AluJo SINE Alu 11 286 -26 2815 204 42 82 chr2 133259661 133259797 -119996786 - L1M4 LINE L1 -2124 4022 3882 2169 116 0 0 chr2 133259797 133260091 -119996492 + AluSg SINE Alu 1 294 -16 2815 204 42 82 chr2 133260091 133260337 -119996246 - L1M4 LINE L1 -2264 3882 3692 1938 222 30 110 chr2 133260451 133261013 -119995570 - L1M4c LINE L1 -4535 2603 1998 1348 212 0 38 chr2 133261013 133261305 -119995278 + AluJo SINE Alu 1 281 -31 1938 222 30 110 chr2 133261305 133261428 -119995155 - L1M4c LINE L1 -5140 1998 1867 2592 120 64 12 chr2 133261428 133261663 -119994920 - MSTA LTR MaLR 0 428 162 2048 121 7 3 chr2 133261663 133261960 -119994623 - AluSx SINE Alu -14 298 1 2592 120 64 12 chr2 133261960 133262131 -119994452 - MSTA LTR MaLR -266 162 1 9920 138 43 5 chr2 133262131 133263722 -119992861 - MSTA-int LTR MaLR 0 1651 1 2700 119 44 5 chr2 133263722 133264134 -119992449 - MSTA LTR MaLR 0 428 1 1938 222 30 110 chr2 133264134 133264315 -119992268 - L1M4c LINE L1 -5269 1869 1676 881 153 0 0 chr2 133264315 133264446 -119992137 - FLAM_C SINE Alu -2 131 1 1938 222 30 110 chr2 133264446 133264563 -119992020 - L1M4c LINE L1 -5462 1676 1551 1669 191 10 3 chr2 133264564 133264862 -119991721 - AluJo SINE Alu -12 300 1 472 226 19 44 chr2 133264990 133265149 -119991434 - LTR37A LTR ERV1 -265 161 7 2599 209 30 57 chr2 133265246 133265925 -119990658 - MER31-int LTR ERV1 -735 4201 3542 2185 86 0 7 chr2 133266094 133266386 -119990197 - AluSg SINE Alu -20 290 1 2254 86 0 0 chr2 133266675 133266977 -119989606 - AluSc SINE Alu -7 302 1 1832 138 10 6 chr2 133267063 133267374 -119989209 - AluJb SINE Alu 0 312 1 324 260 10 20 chr2 133267523 133267623 -119988960 - MER31-int LTR ERV1 -3649 1287 1189 25 65 0 0 chr2 133267655 133267701 -119988882 + GC_rich Low_complexity Low_complexity 1 46 0 399 261 172 0 chr2 133268183 133268317 -119988266 - MER3 DNA MER1_type -49 160 4 3219 158 10 0 chr2 133268640 133269160 -119987423 + LTR45 LTR ERV1 1 525 0 184 276 66 40 chr2 133269429 133269505 -119987078 - L2 LINE L2 -541 2773 2696 1405 129 125 4 chr2 133269516 133269772 -119986811 + AluSx SINE Alu 1 287 -25 548 275 115 33 chr2 133270561 133271094 -119985489 - L2 LINE L2 -253 3060 2470 243 273 144 45 chr2 133271381 133271513 -119985070 - L2 LINE L2 -1415 1899 1755 293 305 48 29 chr2 133271677 133271782 -119984801 + MIR SINE MIR 85 191 -71 2064 147 42 3 chr2 133271814 133272168 -119984415 - L1MB3 LINE L1 -211 5972 5605 278 198 9 75 chr2 133272152 133272258 -119984325 + L1MC4 LINE L1 6605 6703 -1339 * 794 121 12 96 chr2 133272257 133272423 -119984160 - L1MB3 LINE L1 -564 5607 5456 392 198 135 36 chr2 133272504 133272615 -119983968 - LTR33A LTR ERVL 0 523 402 771 170 156 19 chr2 133273148 133273360 -119983223 - L1MD1 LINE L1 0 6242 6002 549 215 195 7 chr2 133275323 133275472 -119981111 + MER5B DNA MER1_type 1 177 -1 1654 149 7 21 chr2 133275966 133276247 -119980336 + AluJb SINE Alu 11 287 -25 1480 162 79 24 chr2 133276926 133277216 -119979367 + AluJb SINE Alu 1 306 -6 279 133 0 0 chr2 133279350 133279395 -119977188 + (A)n Simple_repeat Simple_repeat 1 45 0 1337 129 124 17 chr2 133279823 133280064 -119976519 + AluSx SINE Alu 1 267 -45 603 260 311 3 chr2 133281210 133281525 -119975058 - Charlie1 DNA MER1_type -5 2756 2345 342 217 185 51 chr2 133282033 133282190 -119974393 + L1ME4a LINE L1 5820 5997 -124 480 300 88 6 chr2 133282244 133282414 -119974169 - MIR SINE MIR -66 196 13 853 199 62 42 chr2 133282946 133283187 -119973396 - L1MC4 LINE L1 -8 8034 7789 2325 86 0 0 chr2 133283263 133283564 -119973019 + AluSx SINE Alu 1 301 -11 288 53 0 0 chr2 133283864 133283902 -119972681 + (TA)n Simple_repeat Simple_repeat 2 39 0 2222 86 0 3 chr2 133283902 133284192 -119972391 - AluSg SINE Alu -21 289 1 1989 128 7 3 chr2 133284234 133284540 -119972043 + AluSx SINE Alu 1 307 -5 258 280 102 51 chr2 133284592 133284749 -119971834 + MIR SINE MIR 33 197 -65 1651 154 33 20 chr2 133284869 133285168 -119971415 - AluJo SINE Alu 0 312 10 2050 112 30 0 chr2 133287201 133287504 -119969079 - AluSx SINE Alu 0 312 1 320 330 9 9 chr2 133288030 133288145 -119968438 + GA-rich Low_complexity Low_complexity 3 117 0 22 0 0 0 chr2 133290108 133290130 -119966453 + AT_rich Low_complexity Low_complexity 1 22 0 1713 137 70 0 chr2 133292695 133292979 -119963604 - AluJo SINE Alu -8 304 1 1933 155 0 0 chr2 133293219 133293528 -119963055 - AluSx SINE Alu -3 309 1 892 212 0 6 chr2 133293578 133293757 -119962826 + AluJb SINE Alu 129 306 -6 1687 157 13 13 chr2 133295611 133295910 -119960673 + AluJo SINE Alu 13 311 -1 1780 130 25 4 chr2 133295915 133296218 -119960365 + AluJb SINE Alu 1 309 0 2217 92 11 0 chr2 133297575 133297856 -119958727 + AluSx SINE Alu 1 284 -28 415 0 0 0 chr2 133297856 133297902 -119958681 + (TAA)n Simple_repeat Simple_repeat 2 180 0 576 314 23 42 chr2 133299468 133299729 -119956854 - MIR SINE MIR 0 262 7 374 293 32 19 chr2 133300152 133300309 -119956274 + L1ME4a LINE L1 5564 5722 -399 452 269 95 48 chr2 133300326 133300642 -119955941 + L1ME4a LINE L1 5769 6099 -22 481 294 7 7 chr2 133301327 133301470 -119955113 - MIR SINE MIR -118 144 2 2337 73 0 13 chr2 133301613 133301915 -119954668 - AluY SINE Alu -13 298 1 419 258 166 41 chr2 133302516 133302787 -119953796 + L1ME4a LINE L1 5604 5908 -213 2035 135 3 7 chr2 133303135 133303439 -119953144 + AluJo SINE Alu 4 306 -6 732 291 44 9 chr2 133303448 133303788 -119952795 + L1ME1 LINE L1 5464 5815 -1993 375 203 127 8 chr2 133303801 133303919 -119952664 + L1ME1 LINE L1 6021 6152 -14 1614 201 14 7 chr2 133303924 133304218 -119952365 + AluJb SINE Alu 1 296 -16 441 0 0 0 chr2 133304229 133304278 -119952305 + (CA)n Simple_repeat Simple_repeat 2 50 0 1165 154 0 96 chr2 133304420 133304660 -119951923 - AluJo SINE Alu -13 299 83 656 239 80 6 chr2 133305654 133305830 -119950753 - MER3 DNA MER1_type 0 209 21 229 295 77 13 chr2 133305967 133306045 -119950538 - MIR3 SINE MIR -18 190 108 1932 189 43 20 chr2 133310435 133310879 -119945704 + L1MC3 LINE L1 6992 7445 -340 261 164 55 0 chr2 133310902 133310957 -119945626 + MER66B LTR ERV1 295 352 -134 301 291 126 46 chr2 133310989 133311140 -119945443 + HAL1 LINE L1 1530 1692 -815 546 302 99 18 chr2 133311602 133311824 -119944759 + MIR SINE MIR 10 249 -13 253 80 0 100 chr2 133312402 133312452 -119944131 + Alu SINE Alu 2 46 -256 234 0 0 0 chr2 133312467 133312493 -119944090 + (CA)n Simple_repeat Simple_repeat 2 27 0 586 140 84 9 chr2 133312569 133312676 -119943907 + AluJb SINE Alu 180 294 -18 252 243 14 27 chr2 133313401 133313475 -119943108 + GA-rich Low_complexity Low_complexity 1 73 0 232 302 0 0 chr2 133313594 133313657 -119942926 + (CA)n Simple_repeat Simple_repeat 2 64 0 2328 93 0 37 chr2 133314039 133314362 -119942221 + AluSq SINE Alu 1 311 -2 1476 189 39 23 chr2 133314366 133314673 -119941910 + AluJb SINE Alu 1 312 0 378 277 155 18 chr2 133315017 133315295 -119941288 + HAL1 LINE L1 1427 1742 -765 291 312 109 27 chr2 133316318 133316722 -119939861 + L1ME4a LINE L1 5591 6027 -94 1171 133 0 28 chr2 133317999 133318180 -119938403 + FRAM SINE Alu 1 176 0 400 227 188 8 chr2 133318654 133318782 -119937801 - MIR SINE MIR -79 183 33 1826 227 132 13 chr2 133319936 133320483 -119936100 + MER90 LTR ERV1 3 614 0 657 214 32 0 chr2 133320878 133321004 -119935579 - AluJb SINE Alu -21 291 162 198 0 0 0 chr2 133321005 133321027 -119935556 + (A)n Simple_repeat Simple_repeat 1 22 0 1572 195 26 7 chr2 133321176 133321478 -119935105 + AluJb SINE Alu 1 308 -4 2277 119 0 0 chr2 133321500 133321803 -119934780 + AluSx SINE Alu 1 303 -9 838 94 0 0 chr2 133321960 133322066 -119934517 - AluY SINE Alu -16 295 190 1818 143 0 14 chr2 133322162 133322448 -119934135 - AluJb SINE Alu -30 282 1 2201 131 0 10 chr2 133322485 133322799 -119933784 + AluSq SINE Alu 1 311 -2 335 311 0 0 chr2 133322800 133322890 -119933693 + L1MC4 LINE L1 6614 6703 -1339 317 276 41 20 chr2 133322828 133322926 -119933657 - L1MC4 LINE L1 -1339 6703 6604 * 1955 151 0 0 chr2 133323199 133323523 -119933060 + AluJb SINE Alu 1 324 0 654 192 8 0 chr2 133323568 133323688 -119932895 + FRAM SINE Alu 43 163 -13 21 0 0 0 chr2 133323776 133323797 -119932786 + AT_rich Low_complexity Low_complexity 1 21 0 2916 6 0 0 chr2 133324429 133324745 -119931838 + AluYb8 SINE Alu 1 316 -2 2148 108 0 11 chr2 133325036 133325347 -119931236 - AluSq SINE Alu 0 308 1 327 276 158 8 chr2 133325600 133325754 -119930829 - MIR SINE MIR -28 180 1 387 252 98 0 chr2 133326058 133326201 -119930382 + L1ME3 LINE L1 6005 6161 -1 487 298 88 80 chr2 133326409 133326560 -119930023 - L3 LINE CR1 -42 1535 1387 1625 187 0 14 chr2 133326560 133326843 -119929740 - AluJo SINE Alu -33 279 1 487 298 88 80 chr2 133326843 133327091 -119929492 - L3 LINE CR1 -190 1387 1133 345 331 204 14 chr2 133327175 133327664 -119928919 - L3 LINE CR1 -652 925 344 2119 138 0 0 chr2 133328172 133328470 -119928113 + AluSx SINE Alu 1 298 -14 1916 142 24 7 chr2 133328920 133329215 -119927368 + AluSx SINE Alu 1 300 -12 724 279 108 21 chr2 133330437 133330677 -119925906 + MIR SINE MIR 2 262 0 28 48 0 0 chr2 133331180 133331222 -119925361 + AT_rich Low_complexity Low_complexity 1 42 0 2170 109 0 34 chr2 133331529 133331850 -119924733 + AluSx SINE Alu 1 310 -2 765 118 15 59 chr2 133331886 133332022 -119924561 + AluJo SINE Alu 7 136 -176 533 337 150 13 chr2 133332067 133332367 -119924216 + L3 LINE CR1 1210 1550 -27 2322 86 0 0 chr2 133333329 133333620 -119922963 - AluY SINE Alu -20 291 1 21 0 0 0 chr2 133333633 133333654 -119922929 + AT_rich Low_complexity Low_complexity 1 21 0 379 300 100 6 chr2 133333763 133333923 -119922660 + MIR3 SINE MIR 31 205 -3 184 184 143 0 chr2 133335781 133335830 -119920753 - L3b LINE CR1 -121 1462 1407 22 0 0 0 chr2 133337909 133337931 -119918652 + AT_rich Low_complexity Low_complexity 1 22 0 1894 128 40 0 chr2 133338891 133339164 -119917419 - AluSq SINE Alu -14 299 16 24 0 0 0 chr2 133339498 133339522 -119917061 + AT_rich Low_complexity Low_complexity 1 24 0 2447 71 0 7 chr2 133339552 133339860 -119916723 + AluY SINE Alu 1 306 -5 318 67 0 0 chr2 133341126 133341171 -119915412 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 814 101 0 2 chr2 133341333 133341577 -119915006 + AluSx SINE Alu 8 306 -4 2192 109 0 3 chr2 133342528 133342859 -119913724 + AluSq SINE Alu 1 330 0 1890 159 11 28 chr2 133343259 133343612 -119912971 - MER7A DNA MER2_type 0 346 2 1493 178 0 4 chr2 133343659 133343895 -119912688 + AluJo SINE Alu 45 279 -33 222 118 0 0 chr2 133343896 133343930 -119912653 + (GGGA)n Simple_repeat Simple_repeat 2 35 0 786 196 0 0 chr2 133344116 133344249 -119912334 - FLAM_C SINE Alu 0 133 1 2228 89 7 7 chr2 133344275 133344568 -119912015 + AluSx SINE Alu 1 293 -19 1716 159 6 52 chr2 133344961 133345287 -119911296 + AluJb SINE Alu 1 311 -1 1516 159 89 4 chr2 133345891 133346161 -119910422 - AluJb SINE Alu -19 293 1 2279 119 0 0 chr2 133346169 133346472 -119910111 - AluSx SINE Alu -9 303 1 1440 183 26 61 chr2 133346604 133346669 -119909914 + L1MB5 LINE L1 5803 5869 -305 2513 46 0 3 chr2 133346669 133346971 -119909612 + AluY SINE Alu 2 302 -9 1440 183 26 61 chr2 133346971 133347283 -119909300 + L1MB5 LINE L1 5869 6167 -7 2100 131 0 0 chr2 133347318 133347609 -119908974 - AluSx SINE Alu -21 291 1 1385 142 20 38 chr2 133348160 133348504 -119908079 + MLT1B LTR MaLR 1 382 -8 1520 158 81 0 chr2 133348573 133348832 -119907751 + AluJb SINE Alu 17 296 -16 1485 164 58 7 chr2 133349758 133350032 -119906551 - AluJo SINE Alu -24 288 1 798 136 7 36 chr2 133350132 133350272 -119906311 + AluJo SINE Alu 1 136 -176 2198 113 0 3 chr2 133350274 133350585 -119905998 + AluSx SINE Alu 1 310 -2 444 233 96 64 chr2 133351197 133351307 -119905276 - MER112 DNA MER1_type 0 260 155 1972 120 10 10 chr2 133351307 133351606 -119904977 + AluSx SINE Alu 1 299 -13 444 233 96 64 chr2 133351606 133351744 -119904839 - MER112 DNA MER1_type -105 155 4 2290 37 0 0 chr2 133352087 133352359 -119904224 - AluY SINE Alu -5 306 35 1251 181 104 0 chr2 133352702 133352961 -119903622 + AluJo SINE Alu 1 286 -26 1976 138 0 10 chr2 133352980 133353284 -119903299 - AluSx SINE Alu -11 301 1 1648 201 96 34 chr2 133353351 133353789 -119902794 + L1MD2 LINE L1 5892 6356 -3 2300 92 3 0 chr2 133353837 133354143 -119902440 + AluSp SINE Alu 1 307 -6 1647 149 0 4 chr2 133354245 133354507 -119902076 + AluSx SINE Alu 1 261 -51 1171 153 135 105 chr2 133354666 133354848 -119901735 - MER2 DNA MER2_type 0 344 146 2138 94 0 0 chr2 133354848 133355134 -119901449 + AluY SINE Alu 1 286 -25 1171 153 135 105 chr2 133355134 133355284 -119901299 - MER2 DNA MER2_type -198 146 2 229 204 0 0 chr2 133355595 133355639 -119900944 - MER5B DNA MER1_type -134 44 1 2483 186 95 110 chr2 133355691 133355720 -119900863 - Charlie1a DNA MER1_type -1311 1450 1422 2164 108 7 3 chr2 133355720 133356026 -119900557 - AluSx SINE Alu -5 307 1 2483 186 95 110 chr2 133356026 133356499 -119900084 - Charlie1a DNA MER1_type -1339 1422 966 1592 179 14 0 chr2 133356499 133356795 -119899788 - AluJb SINE Alu -6 306 7 2483 186 95 110 chr2 133356795 133357266 -119899317 - Charlie1a DNA MER1_type -1795 966 490 4279 162 43 30 chr2 133357269 133358154 -119898429 - L1MC1 LINE L1 0 6333 5438 1575 196 7 3 chr2 133358154 133358455 -119898128 - AluJo SINE Alu -10 302 1 499 222 28 94 chr2 133358462 133358521 -119898062 - L1MC1 LINE L1 -1768 4378 4317 1767 167 0 3 chr2 133358521 133358808 -119897775 + AluSx SINE Alu 1 286 -26 499 222 28 94 chr2 133358808 133358960 -119897623 - L1MC1 LINE L1 -1829 4317 4181 6725 62 7 47 chr2 133358971 133360365 -119896218 - SVA Other Other -520 1386 433 23 0 0 0 chr2 133360394 133360417 -119896166 + GC_rich Low_complexity Low_complexity 1 23 0 5128 68 27 60 chr2 133360432 133361787 -119894796 - SVA Other Other -518 868 71 2024 233 55 27 chr2 133361832 133361965 -119894618 - L1MC1 LINE L1 -2060 4086 3958 1909 130 0 3 chr2 133361965 133362257 -119894326 - AluJb SINE Alu -21 291 1 2024 233 55 27 chr2 133362257 133362720 -119893863 - L1MC1 LINE L1 -2188 3958 3473 805 178 12 18 chr2 133362732 133362895 -119893688 - FRAM SINE Alu -15 161 1 822 243 14 9 chr2 133362897 133363111 -119893472 - L1MC1 LINE L1 -2658 3488 3274 378 290 129 0 chr2 133363147 133363271 -119893312 - Charlie1a DNA MER1_type -949 506 367 778 153 8 8 chr2 133363305 133363436 -119893147 - FRAM SINE Alu -38 138 8 968 196 43 93 chr2 133363447 133363470 -119893113 - Charlie1a DNA MER1_type -2392 369 346 1322 206 118 18 chr2 133363470 133363810 -119892773 - MLT1A2 LTR MaLR 0 374 1 968 196 43 93 chr2 133363810 133364063 -119892520 - Charlie1a DNA MER1_type -2415 346 109 2299 91 0 0 chr2 133364063 133364359 -119892224 - AluSx SINE Alu -16 296 1 968 196 43 93 chr2 133364359 133364403 -119892180 - Charlie1a DNA MER1_type -2652 109 64 2017 90 3 48 chr2 133364500 133364812 -119891771 + AluSx SINE Alu 1 298 -14 2247 97 0 0 chr2 133365269 133365569 -119891014 + AluSx SINE Alu 1 300 -12 1824 155 3 3 chr2 133365581 133365884 -119890699 + AluJo SINE Alu 3 305 -7 1540 137 10 55 chr2 133365973 133366266 -119890317 + AluJb SINE Alu 1 280 -32 246 32 0 0 chr2 133366267 133366298 -119890285 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 183 114 0 0 chr2 133366301 133366336 -119890247 + (GAAA)n Simple_repeat Simple_repeat 3 37 0 2018 135 6 3 chr2 133366338 133366649 -119889934 + AluSq SINE Alu 1 312 -1 2123 128 0 3 chr2 133366671 133366984 -119889599 + AluSx SINE Alu 1 312 0 616 194 39 16 chr2 133366998 133367127 -119889456 + FLAM_A SINE Alu 1 132 -1 2224 106 0 0 chr2 133367218 133367519 -119889064 - AluSg SINE Alu -9 301 1 994 183 0 58 chr2 133367744 133367968 -119888615 + AluJb SINE Alu 86 296 -16 1940 134 7 7 chr2 133368195 133368494 -119888089 - AluJb SINE Alu -13 299 1 637 135 24 79 chr2 133368557 133368683 -119887900 + FLAM_C SINE Alu 7 125 -18 509 240 0 0 chr2 133369047 133369151 -119887432 - MER82 DNA MER2_type -1 652 549 2087 113 0 0 chr2 133369332 133369623 -119886960 + AluSg SINE Alu 1 291 -19 254 280 240 16 chr2 133369687 133369812 -119886771 + MIR3 SINE MIR 19 171 -37 1645 167 3 7 chr2 133369850 133370137 -119886446 + AluJb SINE Alu 1 286 -26 2301 97 0 0 chr2 133370206 133370516 -119886067 + AluSx SINE Alu 1 310 -2 718 86 0 0 chr2 133371026 133371119 -119885464 - HY4 scRNA scRNA 0 93 1 941 184 26 117 chr2 133371271 133371633 -119884950 + L1M4 LINE L1 5046 5371 -797 1475 106 0 0 chr2 133371633 133371832 -119884751 + AluSq SINE Alu 1 199 -114 941 184 26 117 chr2 133371832 133371876 -119884707 + L1M4 LINE L1 5371 5417 -751 693 122 22 101 chr2 133371878 133372017 -119884566 + FRAM SINE Alu 24 151 -25 1362 182 14 84 chr2 133372022 133372391 -119884192 + L1M4 LINE L1 5417 5759 -419 2212 90 0 10 chr2 133372475 133372775 -119883808 + AluY SINE Alu 3 299 -12 1257 179 16 78 chr2 133373106 133373413 -119883170 + AluJo SINE Alu 5 292 -20 594 217 0 40 chr2 133373417 133373500 -119883083 + L1M3 LINE L1 5475 5551 -632 767 117 62 23 chr2 133373500 133373656 -119882927 + FLAM_C SINE Alu 1 133 0 594 217 0 40 chr2 133373656 133373724 -119882859 + L1M3 LINE L1 5551 5620 -563 1816 146 10 3 chr2 133373724 133374012 -119882571 + AluSx SINE Alu 1 290 -22 1962 107 46 0 chr2 133374019 133374300 -119882283 + AluSx SINE Alu 1 294 -18 1678 98 0 0 chr2 133374477 133374702 -119881881 - AluSx SINE Alu -87 225 1 365 276 124 65 chr2 133374775 133374818 -119881765 + L1MC4a LINE L1 6130 6169 -1639 1509 194 0 10 chr2 133374818 133375122 -119881461 + AluJb SINE Alu 3 303 -9 365 276 124 65 chr2 133375122 133375368 -119881215 + L1MC4a LINE L1 6169 6436 -1372 1853 128 49 0 chr2 133375418 133375706 -119880877 + AluSx SINE Alu 1 302 -10 637 231 157 22 chr2 133375706 133375935 -119880648 + L1MC4a LINE L1 6572 6831 -977 918 146 0 0 chr2 133375946 133376097 -119880486 + FRAM SINE Alu 25 175 -1 591 249 151 50 chr2 133376115 133376160 -119880423 + L1MC4 LINE L1 7601 7640 -402 2278 67 34 0 chr2 133376160 133376458 -119880125 + AluY SINE Alu 1 308 -3 591 249 151 50 chr2 133376458 133376809 -119879774 + L1MC4 LINE L1 7640 8037 -5 376 280 164 31 chr2 133376782 133377100 -119879483 + L1MC4 LINE L1 7049 7408 -634 * 1769 150 6 13 chr2 133377189 133377502 -119879081 - AluJb SINE Alu -1 311 1 378 214 51 20 chr2 133377503 133377601 -119878982 + L1MC5 LINE L1 7278 7378 -583 842 194 17 11 chr2 133378070 133378245 -119878338 + AluJb SINE Alu 120 295 -17 44 0 0 0 chr2 133378245 133378289 -119878294 + AT_rich Low_complexity Low_complexity 1 44 0 2261 91 10 0 chr2 133378319 133378627 -119877956 - AluSx SINE Alu -1 311 1 400 286 107 19 chr2 133378926 133379132 -119877451 + L1MC4 LINE L1 7802 8025 -17 2032 109 10 10 chr2 133379132 133379426 -119877157 - AluSq SINE Alu -19 294 1 828 179 0 0 chr2 133379976 133380110 -119876473 + FRAM SINE Alu 38 171 -5 337 266 29 28 chr2 133380357 133380504 -119876079 - MIR SINE MIR -65 143 20 1025 81 0 7 chr2 133380733 133380869 -119875714 + AluSq/x SINE Alu 1 135 -178 2470 49 0 7 chr2 133380869 133381177 -119875406 + AluY SINE Alu 1 306 -5 2485 62 0 0 chr2 133381549 133381856 -119874727 - AluSx SINE Alu -5 307 1 243 188 0 0 chr2 133382163 133382211 -119874372 + (TA)n Simple_repeat Simple_repeat 1 48 0 1319 204 136 9 chr2 133383793 133384132 -119872451 + L1ME3 LINE L1 5556 5937 -225 664 214 68 73 chr2 133384177 133384383 -119872200 + AluJo SINE Alu 84 288 -24 417 257 165 18 chr2 133384389 133384607 -119871976 + L1ME4a LINE L1 5615 5864 -257 1136 169 29 45 chr2 133384653 133384778 -119871805 - AluJo SINE Alu -73 239 118 1419 170 105 56 chr2 133384778 133385207 -119871376 + LTR7 LTR ERV1 1 450 0 1136 169 29 45 chr2 133385207 133385324 -119871259 - AluJo SINE Alu -194 118 1 377 262 51 51 chr2 133385740 133385954 -119870629 + L1MC5 LINE L1 7362 7575 -386 2242 95 0 3 chr2 133386010 133386315 -119870268 - AluSg1 SINE Alu -5 304 1 1940 122 3 39 chr2 133386347 133386659 -119869924 + AluSq SINE Alu 1 301 -12 236 241 0 0 chr2 133386676 133386734 -119869849 + L1MC5 LINE L1 7726 7783 -178 739 177 6 63 chr2 133386743 133386918 -119869665 + L1M4 LINE L1 8 172 -6370 1147 226 113 11 chr2 133387002 133387276 -119869307 - AluJo SINE Alu 0 302 1 596 136 0 0 chr2 133387437 133387525 -119869058 + AluJ/FLAM SINE Alu 2 89 -223 2092 113 0 10 chr2 133387725 133388025 -119868558 + AluSx SINE Alu 2 298 -14 2392 70 0 0 chr2 133388028 133388328 -119868255 + AluY SINE Alu 1 300 -11 1985 88 4 0 chr2 133388851 133389111 -119867472 + AluSx SINE Alu 1 261 -51 517 182 36 133 chr2 133389215 133389288 -119867295 + MER58C DNA MER1_type 67 117 -2303 539 211 0 84 chr2 133389288 133389430 -119867153 + FLAM_A SINE Alu 4 133 0 517 182 36 133 chr2 133389430 133389521 -119867062 + MER58C DNA MER1_type 117 215 0 321 290 68 87 chr2 133389521 133389657 -119866926 + L2 LINE L2 2578 2710 -604 1921 138 3 0 chr2 133389657 133389946 -119866637 + AluSx SINE Alu 6 295 -17 321 290 68 87 chr2 133389946 133390016 -119866567 + L2 LINE L2 2710 2780 -534 2289 199 30 108 chr2 133390171 133390835 -119865748 + LTR9 LTR ERV1 1 612 0 13130 158 44 40 chr2 133390856 133391863 -119864720 + HUERS-P3 LTR ERV1 23 1024 -7895 2274 88 3 0 chr2 133391863 133392159 -119864424 - AluSx SINE Alu -14 298 2 13130 158 44 40 chr2 133392159 133394649 -119861934 + HUERS-P3 LTR ERV1 1024 3701 -5218 5665 113 3 0 chr2 133394643 133395410 -119861173 + HUERS-P3 LTR ERV1 4863 5631 -3288 * 2064 141 0 0 chr2 133395411 133395723 -119860860 + AluSx SINE Alu 1 312 0 2131 114 0 0 chr2 133395793 133396083 -119860500 + AluSg SINE Alu 1 290 -20 1994 125 0 10 chr2 133396227 133396524 -119860059 - AluSx SINE Alu -18 294 1 2130 120 0 0 chr2 133396567 133396876 -119859707 + AluSg1 SINE Alu 1 309 0 23 33 0 0 chr2 133396882 133396912 -119859671 + AT_rich Low_complexity Low_complexity 1 30 0 2208 83 13 7 chr2 133396918 133397219 -119859364 - AluY SINE Alu -8 303 1 1484 142 1 28 chr2 133397229 133397478 -119859105 + HUERS-P3 LTR ERV1 7179 8916 -3 2012 214 31 82 chr2 133397481 133397956 -119858627 + LTR9 LTR ERV1 1 436 -176 1888 148 0 0 chr2 133397956 133398247 -119858336 - AluSx SINE Alu -15 297 7 2012 214 31 82 chr2 133398247 133398416 -119858167 + LTR9 LTR ERV1 436 612 0 2344 117 8 60 chr2 133398463 133398646 -119857937 + THE1B LTR MaLR 1 155 -209 2069 118 6 6 chr2 133398646 133398959 -119857624 + AluSq SINE Alu 1 313 0 2344 117 8 60 chr2 133398959 133399159 -119857424 + THE1B LTR MaLR 155 364 0 11545 104 6 18 chr2 133399159 133399592 -119856991 + THE1B-int LTR MaLR 1 438 -1142 2286 110 3 3 chr2 133399592 133399902 -119856681 - AluSx SINE Alu -2 310 1 2531 81 0 3 chr2 133399910 133400217 -119856366 - AluSp SINE Alu -6 307 2 11545 104 6 18 chr2 133400217 133401373 -119855210 + THE1B-int LTR MaLR 445 1579 -1 2366 130 5 16 chr2 133401374 133401742 -119854841 + THE1B LTR MaLR 1 364 0 191 333 45 64 chr2 133401779 133401870 -119854713 + L2 LINE L2 3119 3207 -65 711 87 0 39 chr2 133401870 133401973 -119854610 - HY3 scRNA scRNA -2 99 1 191 333 45 64 chr2 133401973 133402037 -119854546 + L2 LINE L2 3207 3271 -1 1805 124 101 0 chr2 133402559 133402849 -119853734 - AluSx SINE Alu 0 316 1 276 102 0 0 chr2 133402905 133402954 -119853629 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 2358 128 41 0 chr2 133403003 133403346 -119853237 + LTR18A LTR ERVL 1 357 0 1868 193 8 2 chr2 133403360 133403821 -119852762 + HERVL18 LTR ERVL 9 541 -5506 1572 187 8 10 chr2 133403814 133404352 -119852231 + HERVL18 LTR ERVL 1148 1810 -4237 * 1172 125 76 2 chr2 133404351 133404608 -119851975 + HERVL18 LTR ERVL 2119 2452 -3595 * 5522 149 3 2 chr2 133404605 133405466 -119851117 + HERVL18 LTR ERVL 2718 3579 -2468 605 143 0 20 chr2 133405509 133405607 -119850976 + AluJo SINE Alu 40 135 -177 1310 110 186 124 chr2 133405608 133405898 -119850685 + AluSx SINE Alu 1 308 -4 463 196 43 0 chr2 133405910 133406002 -119850581 + L1MB8 LINE L1 6074 6169 -9 1980 152 14 0 chr2 133406003 133406299 -119850284 - AluSx SINE Alu -8 304 5 2215 106 0 43 chr2 133406329 133406651 -119849932 + AluSg SINE Alu 1 308 -2 398 275 19 39 chr2 133406651 133406858 -119849725 + L1MEd LINE L1 946 1148 -4971 2124 128 0 0 chr2 133406864 133407162 -119849421 + AluSx SINE Alu 1 298 -14 319 268 76 52 chr2 133407209 133407408 -119849175 + L1MEd LINE L1 1170 1378 -4751 2421 107 0 0 chr2 133407408 133407717 -119848866 - AluSg SINE Alu -1 309 1 319 268 76 52 chr2 133407717 133407767 -119848816 + L1MEd LINE L1 1378 1425 -4704 1896 155 0 16 chr2 133407768 133408071 -119848512 + AluSx SINE Alu 1 298 -14 2379 94 0 0 chr2 133408157 133408455 -119848128 + AluSx SINE Alu 1 298 -14 258 269 109 50 chr2 133408534 133408653 -119847930 + L2 LINE L2 3163 3288 -25 1617 149 38 35 chr2 133408655 133408944 -119847639 + AluJo SINE Alu 1 290 -22 22 35 0 0 chr2 133409083 133409112 -119847471 + AT_rich Low_complexity Low_complexity 1 29 0 2016 111 45 7 chr2 133409120 133409409 -119847174 + AluSx SINE Alu 2 301 -11 2146 121 3 0 chr2 133409409 133409705 -119846878 + AluSx SINE Alu 1 298 -14 1710 171 27 27 chr2 133409709 133409883 -119846700 - AluJo SINE Alu -20 292 116 585 0 0 0 chr2 133409883 133409948 -119846635 + (TG)n Simple_repeat Simple_repeat 2 66 0 1710 171 27 27 chr2 133409948 133410065 -119846518 - AluJo SINE Alu -195 117 1 2005 110 69 3 chr2 133410085 133410375 -119846208 - AluSg SINE Alu -1 309 1 2262 105 0 16 chr2 133410381 133410686 -119845897 - AluSx SINE Alu -12 300 1 658 181 78 0 chr2 133410781 133410897 -119845686 + FLAM_C SINE Alu 1 125 -8 791 167 0 15 chr2 133411254 133411386 -119845197 - FLAM_C SINE Alu -1 132 3 1343 146 44 0 chr2 133411452 133411658 -119844925 + AluSx SINE Alu 1 215 -97 2315 104 0 0 chr2 133411790 133412087 -119844496 - AluSg1 SINE Alu -10 299 3 2374 55 0 24 chr2 133412106 133412425 -119844158 - AluY SINE Alu 0 311 1 2258 111 0 3 chr2 133412429 133412726 -119843857 - AluSx SINE Alu -16 296 1 211 288 9 54 chr2 133413118 133413229 -119843354 + CT-rich Low_complexity Low_complexity 2 107 0 510 261 101 11 chr2 133414092 133414151 -119842432 - MER3 DNA MER1_type 0 209 157 2198 108 7 7 chr2 133414151 133414447 -119842136 + AluSx SINE Alu 1 296 -16 510 261 101 11 chr2 133414447 133414575 -119842008 - MER3 DNA MER1_type -52 157 5 2421 67 10 7 chr2 133414757 133415057 -119841526 + AluSq SINE Alu 1 301 -12 1514 195 26 63 chr2 133415796 133415947 -119840636 + MLT1A1 LTR MaLR 1 156 -209 1800 167 17 10 chr2 133415947 133416247 -119840336 + AluJb SINE Alu 1 302 -10 1514 195 26 63 chr2 133416247 133416474 -119840109 + MLT1A1 LTR MaLR 156 365 0 2422 101 0 0 chr2 133416768 133417074 -119839509 - AluSq SINE Alu -7 306 1 575 146 10 0 chr2 133417356 133417452 -119839131 + U6 snRNA snRNA 1 97 -10 2314 96 10 0 chr2 133417494 133417795 -119838788 - AluSp SINE Alu -9 304 1 457 241 82 59 chr2 133417918 133418088 -119838495 - MIR SINE MIR 0 262 89 2076 118 27 3 chr2 133418102 133418398 -119838185 + AluSx SINE Alu 10 312 0 25 0 0 0 chr2 133418763 133418788 -119837795 + AT_rich Low_complexity Low_complexity 1 25 0 1497 173 69 28 chr2 133419482 133419771 -119836812 + AluJb SINE Alu 1 301 -11 1804 121 110 0 chr2 133420528 133420656 -119835927 - AluSq SINE Alu -10 303 190 2364 71 0 0 chr2 133420656 133420936 -119835647 - AluY SINE Alu -31 280 1 1804 121 110 0 chr2 133420936 133421080 -119835503 - AluSq SINE Alu -123 190 1 331 140 0 0 chr2 133421121 133421171 -119835412 - Alu SINE Alu -252 50 1 2068 129 7 0 chr2 133421175 133421461 -119835122 - AluSc SINE Alu -21 288 1 261 231 87 58 chr2 133421659 133421832 -119834751 - L1ME3A LINE L1 -233 5937 5760 890 143 8 0 chr2 133421885 133422018 -119834565 + AluSq/x SINE Alu 1 134 -179 422 302 49 37 chr2 133422018 133422238 -119834345 - L1ME3A LINE L1 -456 5708 5486 2508 78 3 0 chr2 133422279 133422585 -119833998 + AluSp SINE Alu 1 307 -6 213 276 0 0 chr2 133422812 133422888 -119833695 + A-rich Low_complexity Low_complexity 1 76 0 1185 179 5 0 chr2 133422925 133423121 -119833462 + AluSx SINE Alu 1 197 -115 1415 181 8 8 chr2 133423702 133423950 -119832633 - AluJo SINE Alu -64 248 1 527 245 63 106 chr2 133423981 133424038 -119832545 - L1MC4 LINE L1 -1046 6996 6938 1706 173 14 20 chr2 133424038 133424333 -119832250 - AluJb SINE Alu -19 293 1 527 245 63 106 chr2 133424333 133424577 -119832006 - L1MC4 LINE L1 -1104 6938 6708 1995 141 38 0 chr2 133424616 133424907 -119831676 - AluSg SINE Alu 0 310 9 262 174 0 0 chr2 133424960 133425006 -119831577 + Alu SINE Alu 3 48 -260 2103 119 0 0 chr2 133425766 133426064 -119830519 + AluSp SINE Alu 9 306 0 2270 84 28 0 chr2 133426213 133426497 -119830086 + AluSg SINE Alu 3 294 -16 2596 68 0 3 chr2 133426507 133426817 -119829766 + AluSq SINE Alu 1 309 -4 225 200 20 0 chr2 133426835 133426885 -119829698 - L1ME4a LINE L1 -105 6016 5966 258 217 0 0 chr2 133426992 133427038 -119829545 - L1ME4a LINE L1 -523 5598 5553 2513 57 0 19 chr2 133427552 133427869 -119828714 - AluY SINE Alu 0 311 1 1494 217 58 0 chr2 133427876 133428171 -119828412 - AluJb SINE Alu 0 312 1 1425 88 10 0 chr2 133428537 133428742 -119827841 + L1MA3 LINE L1 5782 5988 -317 1531 165 55 52 chr2 133428742 133429051 -119827532 + AluJo SINE Alu 1 310 -2 1063 60 84 30 chr2 133429072 133429197 -119827386 + L1MA3 LINE L1 6131 6269 -36 2417 96 0 0 chr2 133429197 133429498 -119827085 + AluSq SINE Alu 1 301 -12 1063 60 84 30 chr2 133429498 133429538 -119827045 + L1MA3 LINE L1 6269 6305 0 264 206 271 28 chr2 133430099 133430206 -119826377 - MIR3 SINE MIR -72 136 4 1691 149 36 13 chr2 133430269 133430570 -119826013 - AluSg SINE Alu -2 308 1 1467 188 13 56 chr2 133430580 133430753 -119825830 - AluJo SINE Alu -22 290 134 2216 101 0 33 chr2 133430753 133431060 -119825523 + AluSx SINE Alu 1 297 -15 1467 188 13 56 chr2 133431060 133431189 -119825394 - AluJo SINE Alu -178 134 1 1260 185 117 56 chr2 133431195 133431524 -119825059 - L1ME3A LINE L1 0 6170 5810 853 128 0 0 chr2 133431524 133431641 -119824942 - FLAM_C SINE Alu -16 117 1 1260 185 117 56 chr2 133431641 133431721 -119824862 - L1ME3A LINE L1 -360 5810 5736 225 230 195 23 chr2 133431734 133431821 -119824762 - MIR SINE MIR -113 149 48 1892 130 0 96 chr2 133431895 133432240 -119824343 + AluSx SINE Alu 1 312 0 883 266 98 68 chr2 133432458 133433094 -119823489 - MER21B LTR ERV1 -149 714 60 2168 115 0 7 chr2 133433127 133433423 -119823160 - AluSc SINE Alu -15 294 1 1277 219 26 20 chr2 133433545 133433888 -119822695 + MLT1B LTR MaLR 1 345 -45 2429 88 3 0 chr2 133434160 133434465 -119822118 - AluSx SINE Alu -6 306 1 1848 146 46 4 chr2 133434691 133434971 -119821612 - AluJo SINE Alu -19 293 2 395 311 26 33 chr2 133435163 133435314 -119821269 - MIR SINE MIR -107 155 6 1834 149 20 10 chr2 133435343 133435638 -119820945 + AluJb SINE Alu 1 298 -14 2315 101 7 0 chr2 133435670 133435968 -119820615 - AluSx SINE Alu -7 305 6 395 246 58 29 chr2 133435972 133436110 -119820473 - L1ME4a LINE L1 -178 5943 5802 2386 86 0 0 chr2 133436551 133436842 -119819741 - AluSg SINE Alu -19 291 1 2176 31 4 0 chr2 133436926 133437180 -119819403 - L1PA5 LINE L1 -2 6152 5898 398 306 82 8 chr2 133437191 133437325 -119819258 - MIR3 SINE MIR -48 160 17 1125 246 43 43 chr2 133437514 133437728 -119818855 - MLT1B LTR MaLR 0 396 175 2213 115 3 16 chr2 133437728 133438033 -119818550 - AluSg SINE Alu -9 301 1 1125 246 43 43 chr2 133438033 133438208 -119818375 - MLT1B LTR MaLR -221 175 1 952 119 0 0 chr2 133438255 133438381 -119818202 + FLAM_C SINE Alu 1 126 -17 237 224 0 0 chr2 133438381 133438439 -119818144 + (TA)n Simple_repeat Simple_repeat 1 58 0 1904 128 14 7 chr2 133438806 133439087 -119817496 + AluSx SINE Alu 28 310 -2 868 192 18 0 chr2 133439088 133439255 -119817328 - MER65A LTR ERV1 -155 290 121 798 161 0 0 chr2 133439274 133439392 -119817191 - AluSq/x SINE Alu -192 120 3 692 155 16 23 chr2 133439400 133439529 -119817054 - MER65A LTR ERV1 -317 128 1 2205 115 3 0 chr2 133439608 133439894 -119816689 + AluSx SINE Alu 1 287 -25 1508 181 41 4 chr2 133439988 133440259 -119816324 - AluJo SINE Alu -10 302 22 466 253 106 82 chr2 133440515 133440629 -119815954 - MER34 LTR ERV1 0 542 432 2343 87 7 3 chr2 133440629 133440938 -119815645 - AluSx SINE Alu -1 311 2 466 253 106 82 chr2 133440938 133441199 -119815384 - MER34 LTR ERV1 -110 432 158 3499 194 52 56 chr2 133441309 133441970 -119814613 - L1MD1 LINE L1 -12 6230 5567 1728 149 85 3 chr2 133441970 133442252 -119814331 + AluJo SINE Alu 1 305 -7 2186 136 13 0 chr2 133442252 133442560 -119814023 + AluSx SINE Alu 1 312 0 3499 194 52 56 chr2 133442560 133442890 -119813693 - L1MD1 LINE L1 -673 5569 5243 228 151 0 19 chr2 133442968 133443016 -119813567 - L1MD1 LINE L1 -1110 5036 4989 2113 66 59 25 chr2 133443016 133443302 -119813281 - AluY SINE Alu -15 296 1 2258 111 0 3 chr2 133443306 133443603 -119812980 - AluSx SINE Alu -16 296 1 211 288 9 54 chr2 133443995 133444106 -119812477 + CT-rich Low_complexity Low_complexity 2 107 0 510 261 101 11 chr2 133444966 133445025 -119811558 - MER3 DNA MER1_type 0 209 157 2198 108 7 7 chr2 133445025 133445321 -119811262 + AluSx SINE Alu 1 296 -16 510 261 101 11 chr2 133445321 133445449 -119811134 - MER3 DNA MER1_type -52 157 5 2421 67 10 7 chr2 133445631 133445931 -119810652 + AluSq SINE Alu 1 301 -12 707 170 48 14 chr2 133446670 133446817 -119809766 + MLT1A1 LTR MaLR 1 152 -213 1800 167 17 10 chr2 133446821 133447121 -119809462 + AluJb SINE Alu 1 302 -10 431 206 43 0 chr2 133447359 133447451 -119809132 + L1MB8 LINE L1 6074 6169 -9 1980 152 14 0 chr2 133447452 133447748 -119808835 - AluSx SINE Alu -8 304 5 2215 106 0 43 chr2 133447778 133448100 -119808483 + AluSg SINE Alu 1 308 -2 398 275 19 39 chr2 133448100 133448307 -119808276 + L1MEd LINE L1 946 1148 -4971 2124 128 0 0 chr2 133448313 133448611 -119807972 + AluSx SINE Alu 1 298 -14 319 268 76 52 chr2 133448658 133448857 -119807726 + L1MEd LINE L1 1170 1378 -4751 2421 107 0 0 chr2 133448857 133449166 -119807417 - AluSg SINE Alu -1 309 1 319 268 76 52 chr2 133449166 133449216 -119807367 + L1MEd LINE L1 1378 1425 -4704 1896 155 0 16 chr2 133449217 133449520 -119807063 + AluSx SINE Alu 1 298 -14 2379 94 0 0 chr2 133449606 133449904 -119806679 + AluSx SINE Alu 1 298 -14 258 269 109 50 chr2 133449983 133450102 -119806481 + L2 LINE L2 3163 3288 -25 1617 149 38 35 chr2 133450104 133450393 -119806190 + AluJo SINE Alu 1 290 -22 22 35 0 0 chr2 133450532 133450561 -119806022 + AT_rich Low_complexity Low_complexity 1 29 0 2016 111 45 7 chr2 133450569 133450857 -119805726 + AluSx SINE Alu 2 300 -12 2146 121 3 0 chr2 133450857 133451154 -119805429 + AluSx SINE Alu 1 298 -14 1729 177 17 24 chr2 133451158 133451334 -119805249 - AluJo SINE Alu -20 292 117 477 0 0 0 chr2 133451334 133451387 -119805196 + (TG)n Simple_repeat Simple_repeat 2 54 0 1729 177 17 24 chr2 133451387 133451504 -119805079 - AluJo SINE Alu -195 117 1 2005 110 69 3 chr2 133451524 133451814 -119804769 - AluSg SINE Alu -1 309 1 2262 105 0 16 chr2 133451820 133452125 -119804458 - AluSx SINE Alu -12 300 1 658 181 78 0 chr2 133452220 133452336 -119804247 + FLAM_C SINE Alu 1 125 -8 791 167 0 15 chr2 133452693 133452825 -119803758 - FLAM_C SINE Alu -1 132 3 1343 146 44 0 chr2 133452891 133453097 -119803486 + AluSx SINE Alu 1 215 -97 2403 102 0 0 chr2 133453229 133453533 -119803050 - AluSq SINE Alu -9 304 1 575 146 10 0 chr2 133453815 133453911 -119802672 + U6 snRNA snRNA 1 97 -10 2324 96 10 0 chr2 133453953 133454255 -119802328 - AluSp SINE Alu -8 305 1 457 241 82 59 chr2 133454378 133454548 -119802035 - MIR SINE MIR 0 262 89 2076 118 27 3 chr2 133454562 133454858 -119801725 + AluSx SINE Alu 10 312 0 25 0 0 0 chr2 133455223 133455248 -119801335 + AT_rich Low_complexity Low_complexity 1 25 0 1497 173 69 28 chr2 133455942 133456231 -119800352 + AluJb SINE Alu 1 301 -11 1804 121 110 0 chr2 133456988 133457116 -119799467 - AluSq SINE Alu -10 303 190 2364 71 0 0 chr2 133457116 133457396 -119799187 - AluY SINE Alu -31 280 1 1804 121 110 0 chr2 133457396 133457540 -119799043 - AluSq SINE Alu -123 190 1 331 140 0 0 chr2 133457581 133457631 -119798952 - Alu SINE Alu -258 50 1 2068 129 7 0 chr2 133457635 133457921 -119798662 - AluSc SINE Alu -21 288 1 261 231 87 58 chr2 133458119 133458292 -119798291 - L1ME3A LINE L1 -233 5937 5760 890 143 8 0 chr2 133458345 133458478 -119798105 + AluSq/x SINE Alu 1 134 -179 422 302 49 37 chr2 133458478 133458698 -119797885 - L1ME3A LINE L1 -456 5708 5486 2517 78 3 0 chr2 133458739 133459046 -119797537 + AluSp SINE Alu 1 308 -5 213 276 0 0 chr2 133459273 133459349 -119797234 + A-rich Low_complexity Low_complexity 1 76 0 1785 160 3 28 chr2 133459386 133459525 -119797058 + AluSx SINE Alu 1 131 -181 2289 77 17 13 chr2 133459525 133459851 -119796732 + AluSx SINE Alu 6 312 0 1785 160 3 28 chr2 133459851 133459993 -119796590 + AluSx SINE Alu 131 275 -37 207 69 0 0 chr2 133459997 133460026 -119796557 + (CAAAA)n Simple_repeat Simple_repeat 1 29 0 843 135 0 40 chr2 133460035 133460161 -119796422 + FLAM_C SINE Alu 1 121 -12 590 120 173 0 chr2 133460184 133460317 -119796266 + L1MA4A LINE L1 6129 6284 -19 207 0 0 0 chr2 133460317 133460340 -119796243 + (TCTA)n Simple_repeat Simple_repeat 4 26 0 698 166 0 83 chr2 133460341 133460376 -119796207 + AluJo/FLAM SINE Alu 1 37 -265 2019 136 7 7 chr2 133460376 133460670 -119795913 - AluSx SINE Alu -18 294 1 698 166 0 83 chr2 133460670 133460779 -119795804 + AluJo/FLAM SINE Alu 37 133 -169 1483 191 11 11 chr2 133460858 133461125 -119795458 - AluJb SINE Alu -45 267 1 1425 169 64 4 chr2 133461143 133461392 -119795191 - AluSx SINE Alu -48 264 1 1837 153 61 0 chr2 133461814 133462140 -119794443 - L1PA15 LINE L1 -4 6161 5816 1054 172 60 33 chr2 133462141 133462356 -119794227 - AluJb SINE Alu -19 293 73 30 0 0 0 chr2 133463276 133463306 -119793277 + AT_rich Low_complexity Low_complexity 1 30 0 180 0 0 0 chr2 133463583 133463603 -119792980 + (A)n Simple_repeat Simple_repeat 1 20 0 2354 92 13 3 chr2 133463696 133464000 -119792583 + AluSq SINE Alu 1 307 -6 240 111 0 0 chr2 133464369 133464405 -119792178 + (CA)n Simple_repeat Simple_repeat 1 36 0 1839 168 0 29 chr2 133464581 133464891 -119791692 + AluJb SINE Alu 1 301 -11 2140 117 16 7 chr2 133464891 133465199 -119791384 + AluSx SINE Alu 1 311 -1 22 56 0 0 chr2 133465258 133465294 -119791289 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr2 133465314 133465338 -119791245 + AT_rich Low_complexity Low_complexity 1 24 0 2084 122 0 0 chr2 133465343 133465629 -119790954 + AluSx SINE Alu 9 294 -18 1212 185 18 40 chr2 133465674 133465901 -119790682 + AluJb SINE Alu 63 284 -28 1847 149 68 47 chr2 133465951 133466380 -119790203 + MER67A LTR ERV1 106 543 0 223 143 36 36 chr2 133466663 133466719 -119789864 + (CCG)n Simple_repeat Simple_repeat 1 56 0 326 216 70 64 chr2 133467143 133467167 -119789416 + HAL1 LINE L1 2007 2029 -478 2460 72 0 25 chr2 133467167 133467487 -119789096 + AluSx SINE Alu 1 312 0 326 216 70 64 chr2 133467487 133467633 -119788950 + HAL1 LINE L1 2029 2178 -329 1834 106 77 0 chr2 133467638 133467912 -119788671 + AluJo SINE Alu 2 296 -16 1644 83 83 93 chr2 133467920 133468233 -119788350 + AluSq SINE Alu 3 312 -1 326 22 43 0 chr2 133471446 133471492 -119785091 + (TAAAA)n Simple_repeat Simple_repeat 5 52 0 21 0 0 0 chr2 133472173 133472194 -119784389 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr2 133474568 133474594 -119781989 + AT_rich Low_complexity Low_complexity 1 26 0 237 235 12 62 chr2 133474668 133474749 -119781834 - MIR SINE MIR -78 184 108 586 254 78 19 chr2 133474802 133475007 -119781576 - MIR SINE MIR -6 256 40 1909 172 3 0 chr2 133476045 133476342 -119780241 + AluJb SINE Alu 1 298 -14 212 0 0 35 chr2 133476369 133476398 -119780185 + (GGAA)n Simple_repeat Simple_repeat 4 31 0 1612 163 28 10 chr2 133476459 133476747 -119779836 - AluJb SINE Alu -19 293 1 2357 102 0 0 chr2 133477310 133477603 -119778980 - AluSc SINE Alu -16 293 1 2070 112 51 3 chr2 133478496 133478615 -119777968 + AluSq SINE Alu 1 113 -200 2395 89 3 0 chr2 133478615 133478907 -119777676 + AluSc SINE Alu 1 293 -16 2070 112 51 3 chr2 133478907 133479081 -119777502 + AluSq SINE Alu 113 308 -5 24 32 0 0 chr2 133480456 133480487 -119776096 + AT_rich Low_complexity Low_complexity 1 31 0 2275 115 10 13 chr2 133480487 133480801 -119775782 + AluSq SINE Alu 1 313 0 803 95 8 71 chr2 133480801 133480927 -119775656 - AluJo/FLAM SINE Alu -184 118 1 218 203 58 43 chr2 133483245 133483314 -119773269 - L3b LINE CR1 -113 1470 1401 187 261 91 0 chr2 133483423 133483511 -119773072 - L3b LINE CR1 -381 1202 1107 206 255 20 0 chr2 133483945 133483996 -119772587 + GA-rich Low_complexity Low_complexity 1 52 0 205 161 0 0 chr2 133484332 133484363 -119772220 + polypyrimidine Low_complexity Low_complexity 4 34 0 1242 196 14 33 chr2 133484363 133484639 -119771944 - AluJo SINE Alu -2 310 40 2047 149 0 3 chr2 133484645 133484947 -119771636 + AluJo SINE Alu 1 301 -11 243 254 45 0 chr2 133484979 133485046 -119771537 - FRAM/FAM SINE Alu -105 61 1 549 179 71 50 chr2 133485217 133485314 -119771269 + MIR SINE MIR 104 197 -65 2153 119 3 0 chr2 133485314 133485599 -119770984 + AluSp SINE Alu 1 286 -27 324 70 0 0 chr2 133485599 133485642 -119770941 + (TA)n Simple_repeat Simple_repeat 2 44 0 549 179 71 50 chr2 133485642 133485683 -119770900 + MIR SINE MIR 196 246 -16 2229 128 0 0 chr2 133485915 133486212 -119770371 - AluSx SINE Alu -13 299 3 23 0 0 0 chr2 133486327 133486350 -119770233 + AT_rich Low_complexity Low_complexity 1 23 0 1863 130 14 21 chr2 133486353 133486661 -119769922 + AluJo SINE Alu 1 306 0 260 188 43 116 chr2 133487511 133487649 -119768934 - L1MC5 LINE L1 -51 7910 7783 2265 159 40 21 chr2 133487732 133488152 -119768431 + MSTA LTR MaLR 1 428 0 186 273 124 50 chr2 133488256 133488377 -119768206 - L3 LINE CR1 -35 1542 1413 828 162 14 7 chr2 133488600 133488742 -119767841 + BC200 scRNA scRNA 2 144 -56 234 0 0 0 chr2 133489352 133489378 -119767205 + (CA)n Simple_repeat Simple_repeat 2 27 0 235 309 52 52 chr2 133490056 133490153 -119766430 + MIR SINE MIR 21 117 -145 1572 183 10 36 chr2 133491172 133491478 -119765105 - AluJo SINE Alu -12 300 3 747 175 0 29 chr2 133491485 133491622 -119764961 - FLAM_A SINE Alu 0 133 1 2423 80 3 3 chr2 133491673 133491973 -119764610 - AluSc SINE Alu -9 300 1 316 318 104 26 chr2 133492008 133492162 -119764421 + MIR SINE MIR 20 185 -77 27 29 0 0 chr2 133493976 133494010 -119762573 + GC_rich Low_complexity Low_complexity 1 34 0 24 53 0 0 chr2 133494119 133494157 -119762426 + GC_rich Low_complexity Low_complexity 1 38 0 25 0 0 0 chr2 133494272 133494297 -119762286 + GC_rich Low_complexity Low_complexity 1 25 0 212 0 36 0 chr2 133494567 133494595 -119761988 + (CGG)n Simple_repeat Simple_repeat 3 31 0 194 62 31 0 chr2 133495188 133495220 -119761363 + (CCTCG)n Simple_repeat Simple_repeat 1 33 0 2567 49 13 13 chr2 133497077 133497385 -119759198 + AluSp SINE Alu 1 308 -5 615 236 123 36 chr2 133497392 133497612 -119758971 + MIR SINE MIR 12 250 -12 1804 153 25 48 chr2 133498086 133498400 -119758183 - AluJo SINE Alu -5 307 1 1310 110 186 124 chr2 133498579 133498869 -119757714 - AluSx SINE Alu -4 308 1 605 143 0 20 chr2 133498870 133498968 -119757615 - AluJo SINE Alu -177 135 40 5483 149 5 2 chr2 133499011 133499871 -119756712 - HERVL18 LTR ERVL -2468 3579 2718 1172 125 76 2 chr2 133499868 133500125 -119756458 - HERVL18 LTR ERVL -3595 2452 2119 * 1572 187 8 10 chr2 133500124 133500662 -119755921 - HERVL18 LTR ERVL -4237 1810 1148 * 1868 193 8 2 chr2 133500655 133501116 -119755467 - HERVL18 LTR ERVL -5506 541 9 2358 128 41 0 chr2 133501130 133501473 -119755110 - LTR18A LTR ERVL 0 357 1 267 104 0 0 chr2 133501522 133501570 -119755013 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 1805 124 101 0 chr2 133501626 133501884 -119754699 + AluSx SINE Alu 1 284 -28 200 0 31 31 chr2 133501884 133501916 -119754667 + (TAAA)n Simple_repeat Simple_repeat 2 92 0 708 87 0 39 chr2 133502502 133502605 -119753978 + HY3 scRNA scRNA 1 99 -2 2340 130 5 16 chr2 133502733 133503101 -119753482 - THE1B LTR MaLR 0 364 1 11405 104 6 18 chr2 133503102 133504258 -119752325 - THE1B-int LTR MaLR -1 1579 410 2524 78 0 3 chr2 133504258 133504565 -119752018 + AluSp SINE Alu 2 307 -6 2260 110 3 3 chr2 133504573 133504883 -119751700 + AluSx SINE Alu 1 310 -2 11405 104 6 18 chr2 133504883 133505316 -119751267 - THE1B-int LTR MaLR -1177 403 1 2371 118 8 50 chr2 133505316 133505512 -119751071 - THE1B LTR MaLR 0 364 190 2192 110 6 19 chr2 133505512 133505829 -119750754 - AluSq SINE Alu 0 313 1 2371 118 8 50 chr2 133505829 133506012 -119750571 - THE1B LTR MaLR -174 190 1 2013 214 31 82 chr2 133506059 133506228 -119750355 - LTR9 LTR ERV1 0 612 436 2010 148 0 0 chr2 133506228 133506519 -119750064 + AluSx SINE Alu 7 297 -15 2013 214 31 82 chr2 133506519 133506994 -119749589 - LTR9 LTR ERV1 -176 436 1 1475 142 1 28 chr2 133506997 133507246 -119749337 - HUERS-P3 LTR ERV1 -3 8916 7179 2385 92 3 0 chr2 133507256 133507559 -119749024 + AluY SINE Alu 1 304 -7 1386 238 26 108 chr2 133507672 133508122 -119748461 - L1ME3 LINE L1 -1 6161 5732 2243 111 3 0 chr2 133508275 133508573 -119748010 + AluSx SINE Alu 1 299 -13 902 137 0 0 chr2 133508580 133508704 -119747879 + FLAM_C SINE Alu 1 124 -19 629 308 31 18 chr2 133508769 133508993 -119747590 + ERVL LTR ERVL 2644 2870 -2894 669 262 116 76 chr2 133509007 133509454 -119747129 - LTR33A LTR ERVL 0 523 59 2237 87 35 0 chr2 133509913 133510202 -119746381 + AluSx SINE Alu 5 303 -9 244 346 62 8 chr2 133511064 133511194 -119745389 + L2 LINE L2 3121 3257 -15 2301 125 0 3 chr2 133511229 133511542 -119745041 - AluSx SINE Alu 0 312 1 635 139 98 8 chr2 133511547 133511669 -119744914 - AluSq/x SINE Alu -179 134 2 257 214 0 18 chr2 133511670 133511726 -119744857 - L1M4 LINE L1 -1843 4303 4249 2105 89 0 24 chr2 133511827 133512120 -119744463 + AluSc SINE Alu 22 307 -2 240 35 0 0 chr2 133512123 133512152 -119744431 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 6244 102 8 85 chr2 133512298 133512421 -119744162 - Tigger1 DNA MER2_type 0 2418 2287 1831 178 0 0 chr2 133512421 133512713 -119743870 + AluJo SINE Alu 1 292 -20 6244 102 8 85 chr2 133512713 133513197 -119743386 - Tigger1 DNA MER2_type -131 2287 1768 1626 161 0 4 chr2 133513197 133513446 -119743137 + AluJo SINE Alu 1 248 -64 6244 102 8 85 chr2 133513446 133513515 -119743068 - Tigger1 DNA MER2_type -650 1768 1695 2018 141 0 10 chr2 133513515 133513827 -119742756 - AluJb SINE Alu -2 310 2 6244 102 8 85 chr2 133513827 133513847 -119742736 - Tigger1 DNA MER2_type -723 1695 1675 2345 98 0 9 chr2 133513847 133514162 -119742421 - AluSx SINE Alu 0 312 1 6244 102 8 85 chr2 133514162 133514535 -119742048 - Tigger1 DNA MER2_type -743 1675 1428 1908 150 0 13 chr2 133514535 133514842 -119741741 + AluJb SINE Alu 1 303 -9 2257 94 7 26 chr2 133514842 133515151 -119741432 + AluSq SINE Alu 1 303 -10 6614 116 36 30 chr2 133515153 133515730 -119740853 - Tigger1 DNA MER2_type -1336 1082 493 2625 61 0 0 chr2 133515730 133516041 -119740542 - AluY SINE Alu 0 311 1 6614 116 36 30 chr2 133516041 133516535 -119740048 - Tigger1 DNA MER2_type -1925 493 4 1173 160 0 5 chr2 133516623 133516811 -119739772 - AluJo SINE Alu -33 279 93 2256 105 0 3 chr2 133517024 133517318 -119739265 + AluSg SINE Alu 1 293 -17 215 269 92 34 chr2 133517427 133517546 -119739037 - MIR3 SINE MIR -39 169 44 2290 88 14 7 chr2 133517671 133517966 -119738617 - AluSq SINE Alu -16 297 1 1978 137 14 3 chr2 133518340 133518632 -119737951 - AluSc SINE Alu -14 295 1 566 27 0 53 chr2 133518632 133518707 -119737876 - AluSc SINE Alu -176 133 63 1417 100 10 25 chr2 133518707 133518907 -119737676 - AluSx SINE Alu -115 197 1 609 190 18 74 chr2 133518907 133519383 -119737200 - LTR57-int LTR ERVL -3955 1388 1235 533 163 43 57 chr2 133518986 133519017 -119737566 - LTR49-int LTR ERV1 -3524 1412 1382 * 1788 156 0 21 chr2 133519017 133519332 -119737251 - AluJb SINE Alu 0 309 1 533 163 43 57 chr2 133519332 133519440 -119737143 - LTR49-int LTR ERV1 -3554 1382 1274 2034 124 37 10 chr2 133519480 133519779 -119736804 - AluSx SINE Alu -5 307 1 1039 274 29 35 chr2 133519950 133520225 -119736358 - LTR49-int LTR ERV1 -2625 1566 1292 1844 175 10 0 chr2 133520225 133520517 -119736066 - AluJb SINE Alu -17 295 1 1039 274 29 35 chr2 133520517 133520555 -119736028 - LTR49-int LTR ERV1 -2899 1292 1255 304 285 57 41 chr2 133520599 133520722 -119735861 - MER34C LTR ERV1 -143 442 318 1620 58 63 10 chr2 133520735 133520941 -119735642 - AluY SINE Alu -9 302 86 417 211 8 84 chr2 133520952 133521113 -119735470 - LTR49-int LTR ERV1 -3673 2658 841 1888 163 30 0 chr2 133521317 133521612 -119734971 - AluJo SINE Alu -8 304 1 1123 121 0 0 chr2 133521701 133521858 -119734725 - AluSg/x SINE Alu -21 291 135 1123 149 11 0 chr2 133521929 133522103 -119734480 - AluJb SINE Alu 0 312 137 2291 114 3 0 chr2 133522114 133522422 -119734161 - AluSx SINE Alu -1 311 3 2289 113 6 0 chr2 133522585 133522896 -119733687 + AluSq SINE Alu 1 313 0 824 164 26 7 chr2 133523028 133523180 -119733403 + FRAM SINE Alu 20 174 -2 1752 166 13 7 chr2 133523186 133523494 -119733089 + AluJb SINE Alu 1 310 -2 1791 163 0 23 chr2 133523621 133523927 -119732656 + AluJb SINE Alu 2 300 -12 3095 87 7 28 chr2 133524284 133524322 -119732261 - MSTA LTR MaLR 0 428 391 1985 134 7 16 chr2 133524322 133524628 -119731955 + AluSx SINE Alu 1 303 -9 3095 87 7 28 chr2 133524628 133525026 -119731557 - MSTA LTR MaLR -37 391 1 507 250 148 20 chr2 133525032 133525228 -119731355 - LTR49-int LTR ERV1 -4184 2147 1927 1958 168 127 30 chr2 133525253 133525438 -119731145 - LTR54 LTR ERV1 0 510 344 2394 74 0 0 chr2 133525438 133525736 -119730847 + AluY SINE Alu 1 298 -13 1958 168 127 30 chr2 133525736 133526014 -119730569 - LTR54 LTR ERV1 -166 344 2 983 229 43 10 chr2 133526014 133526316 -119730267 + L1MB4 LINE L1 2110 2421 -3963 1706 167 14 10 chr2 133526323 133526616 -119729967 + AluJb SINE Alu 1 294 -18 1362 152 93 4 chr2 133526632 133526901 -119729682 + L1MA4 LINE L1 6008 6300 0 2108 94 25 0 chr2 133526927 133527204 -119729379 + AluSq SINE Alu 11 294 -19 2874 216 69 82 chr2 133527206 133527240 -119729343 + L1MB4 LINE L1 2419 2452 -3930 2276 101 7 0 chr2 133527240 133527537 -119729046 + AluSx SINE Alu 1 299 -13 2874 216 69 82 chr2 133527537 133528072 -119728511 + L1MB4 LINE L1 2452 2993 -3389 2032 135 10 0 chr2 133528072 133528361 -119728222 + AluSx SINE Alu 1 292 -20 2874 216 69 82 chr2 133528361 133529066 -119727517 + L1MB4 LINE L1 2993 3677 -2705 463 285 21 14 chr2 133529918 133530062 -119726521 + L1PB4 LINE L1 6012 6156 0 2200 98 35 0 chr2 133530097 133530383 -119726200 + AluSq SINE Alu 1 296 -17 198 0 0 0 chr2 133530456 133530478 -119726105 + (A)n Simple_repeat Simple_repeat 1 22 0 782 194 121 0 chr2 133530479 133530644 -119725939 + AluJo SINE Alu 2 186 -126 1879 129 50 0 chr2 133530949 133531251 -119725332 + Tigger3(Golem) DNA MER2_type 1 317 -2712 2116 105 4 4 chr2 133531258 133531535 -119725048 - AluJb SINE Alu -24 288 12 2727 124 81 5 chr2 133531547 133531981 -119724602 + Tigger3(Golem) DNA MER2_type 2562 3028 -1 2496 213 50 106 chr2 133531981 133532663 -119723920 + L1MB4 LINE L1 3694 4412 -1970 2063 113 7 0 chr2 133532663 133532937 -119723646 - AluSx SINE Alu -36 276 1 2496 213 50 106 chr2 133532937 133533214 -119723369 + L1MB4 LINE L1 4412 4595 -1787 2205 124 0 13 chr2 133533214 133533520 -119723063 - AluSx SINE Alu -10 302 1 2496 213 50 106 chr2 133533520 133533580 -119723003 + L1MB4 LINE L1 4595 4657 -1725 1919 150 4 0 chr2 133533589 133533909 -119722674 + AluJb SINE Alu 1 321 0 1878 216 64 26 chr2 133533910 133534469 -119722114 + L1MB4 LINE L1 5781 6389 -18 418 202 0 0 chr2 133534493 133534577 -119722006 + L1MB8 LINE L1 6093 6176 -2 667 172 90 0 chr2 133534736 133534858 -119721725 + FLAM_C SINE Alu 1 133 0 2525 227 73 47 chr2 133534863 133535497 -119721086 + L1ME2 LINE L1 4316 4932 -1232 2024 159 3 0 chr2 133535497 133535805 -119720778 + AluJb SINE Alu 1 309 -3 2525 227 73 47 chr2 133535805 133536032 -119720551 + L1ME2 LINE L1 4932 5151 -1013 1836 139 26 32 chr2 133536032 133536341 -119720242 + AluJb SINE Alu 1 307 -5 2525 227 73 47 chr2 133536341 133537083 -119719500 + L1ME2 LINE L1 5151 6100 -64 1839 178 14 0 chr2 133537457 133537750 -119718833 + AluJb SINE Alu 1 297 -15 763 158 0 0 chr2 133537802 133537916 -119718667 - FLAM_C SINE Alu -18 125 12 2177 118 0 3 chr2 133537939 133538236 -119718347 - AluSx SINE Alu -16 296 1 1120 176 0 34 chr2 133538404 133538637 -119717946 + AluJo SINE Alu 85 310 0 2290 89 3 0 chr2 133541038 133541356 -119715227 + AluSp SINE Alu 1 313 0 756 180 8 0 chr2 133541601 133541722 -119714861 - LTR53 LTR ERVL -8 511 390 3679 134 37 36 chr2 133541722 133542362 -119714221 - Tigger3(Golem) DNA MER2_type 0 3028 2385 1559 190 16 23 chr2 133542362 133542667 -119713916 - AluJo SINE Alu -9 303 1 3679 134 37 36 chr2 133542667 133542726 -119713857 - Tigger3(Golem) DNA MER2_type -643 2385 2328 1216 159 0 67 chr2 133542729 133542765 -119713818 + AluJo SINE Alu 86 123 -189 2144 103 10 3 chr2 133542765 133543057 -119713526 - AluSg SINE Alu -16 294 1 1216 159 0 67 chr2 133543057 133543259 -119713324 + AluJo SINE Alu 123 308 -4 1069 192 24 71 chr2 133543304 133543559 -119713024 - LTR53 LTR ERVL -276 243 1 1877 179 0 0 chr2 133543987 133544284 -119712299 - AluJo SINE Alu -15 297 1 955 262 42 64 chr2 133544310 133544719 -119711864 + L1M4b LINE L1 543 942 -5917 428 195 49 8 chr2 133544719 133544842 -119711741 - L1MDa LINE L1 -2144 4396 4269 442 243 126 23 chr2 133544847 133544939 -119711644 + MLT1C LTR MaLR 1 82 -385 2344 84 0 3 chr2 133544939 133545235 -119711348 + AluSx SINE Alu 8 302 -10 442 243 126 23 chr2 133545235 133545356 -119711227 + MLT1C LTR MaLR 82 236 -231 * 1114 229 52 22 chr2 133545345 133545655 -119710928 + MLT1C LTR MaLR 180 465 -2 927 217 107 8 chr2 133545661 133545914 -119710669 - L1MDa LINE L1 -2276 4264 3987 915 222 55 52 chr2 133545953 133546086 -119710497 - L1MDa LINE L1 -3734 2845 2714 390 21 0 0 chr2 133546086 133546133 -119710450 + (TG)n Simple_repeat Simple_repeat 2 48 0 2055 135 0 10 chr2 133546133 133546421 -119710162 - AluSx SINE Alu -27 285 1 915 222 55 52 chr2 133546421 133546660 -119709923 - L1MDa LINE L1 -3865 2714 2425 2315 93 0 26 chr2 133546660 133546973 -119709610 - AluSx SINE Alu -7 305 1 915 222 55 52 chr2 133546973 133547008 -119709575 - L1MDa LINE L1 -4154 2425 2392 241 128 64 0 chr2 133548843 133548890 -119707693 - MIR SINE MIR -7 255 206 865 321 77 11 chr2 133548891 133549327 -119707256 + MLT1J LTR MaLR 1 568 -47 427 229 165 35 chr2 133549365 133549535 -119707048 - MIR SINE MIR -64 198 7 4829 275 91 24 chr2 133549671 133550506 -119706077 + L2 LINE L2 760 1538 -1775 2200 108 24 0 chr2 133550506 133550802 -119705781 + AluSq SINE Alu 1 303 -10 4829 275 91 24 chr2 133550802 133552207 -119704376 + L2 LINE L2 1538 3168 -145 201 74 0 0 chr2 133552207 133552234 -119704349 + (CATA)n Simple_repeat Simple_repeat 2 28 0 4829 275 91 24 chr2 133552234 133552350 -119704233 + L2 LINE L2 3168 3275 -38 22 0 0 0 chr2 133552766 133552788 -119703795 + AT_rich Low_complexity Low_complexity 1 22 0 28 0 0 0 chr2 133553804 133553832 -119702751 + AT_rich Low_complexity Low_complexity 1 28 0 1981 139 0 3 chr2 133553832 133554119 -119702464 - AluJb SINE Alu -26 286 1 2581 151 87 82 chr2 133554405 133554800 -119701783 + MER21B LTR ERV1 227 628 -235 2039 49 4 0 chr2 133554800 133555047 -119701536 + L1PA5 LINE L1 5907 6154 0 2581 151 87 82 chr2 133555047 133555282 -119701301 + MER21B LTR ERV1 628 860 -3 1399 181 22 37 chr2 133555352 133555623 -119700960 + AluJo SINE Alu 5 271 -41 1649 176 14 14 chr2 133555724 133556020 -119700563 + AluJo SINE Alu 1 296 -16 758 267 67 35 chr2 133556109 133556375 -119700208 + HAL1 LINE L1 1105 1361 -1146 719 34 34 0 chr2 133556375 133556464 -119700119 + L1PA8 LINE L1 6075 6166 -6 2251 91 0 3 chr2 133556464 133556751 -119699832 + AluSg SINE Alu 1 286 -24 758 267 67 35 chr2 133556751 133556918 -119699665 + HAL1 LINE L1 1360 1553 -954 470 31 0 15 chr2 133556952 133557017 -119699566 + (GA)n Simple_repeat Simple_repeat 1 64 0 1384 203 46 0 chr2 133557020 133557281 -119699302 - AluJb SINE Alu -39 273 1 256 238 48 0 chr2 133557286 133557349 -119699234 + HAL1 LINE L1 1557 1622 -885 * 2059 233 89 29 chr2 133557340 133558232 -119698351 + L1MDa LINE L1 9 1347 -5193 900 149 13 13 chr2 133558232 133558386 -119698197 - FAM SINE Alu -19 156 3 323 243 0 0 chr2 133558389 133558463 -119698120 + L1MDa LINE L1 1396 1469 -5074 * 978 273 82 18 chr2 133558459 133558848 -119697735 + HAL1 LINE L1 1613 2026 -481 332 275 54 18 chr2 133559080 133559247 -119697336 - MER104 DNA MER2_type -4 176 4 1929 130 9 47 chr2 133559313 133559635 -119696948 - AluJb SINE Alu -2 310 1 912 124 0 29 chr2 133559642 133559779 -119696804 - FLAM_C SINE Alu 0 133 1 759 307 85 9 chr2 133560335 133560654 -119695929 - L1MC/D LINE L1 -2127 5681 5339 4894 32 0 0 chr2 133560654 133561220 -119695363 + L1PA4 LINE L1 5587 6152 -3 311 301 20 54 chr2 133561362 133561565 -119695018 - L1MC/D LINE L1 -817 5329 5134 1740 181 0 3 chr2 133561578 133561860 -119694723 - AluJb SINE Alu -31 281 1 1730 125 24 35 chr2 133561917 133562204 -119694379 + THE1B LTR MaLR 1 284 -80 787 209 19 6 chr2 133562379 133562537 -119694046 + FRAM SINE Alu 1 159 -17 2499 91 0 0 chr2 133562541 133562848 -119693735 + AluSq SINE Alu 1 307 -6 223 229 33 0 chr2 133562960 133563021 -119693562 + A-rich Low_complexity Low_complexity 2 64 0 2263 98 3 7 chr2 133563045 133563342 -119693241 + AluSx SINE Alu 1 296 -16 2326 104 0 7 chr2 133563344 133563651 -119692932 + AluSc SINE Alu 1 305 -4 729 186 0 36 chr2 133563672 133563812 -119692771 + AluJb SINE Alu 160 294 -18 2118 141 7 0 chr2 133563842 133564146 -119692437 + AluSx SINE Alu 5 310 -2 2298 99 0 13 chr2 133564391 133564705 -119691878 + AluSg SINE Alu 1 310 0 2328 107 0 0 chr2 133564751 133565051 -119691532 + AluSq SINE Alu 1 300 -13 502 126 11 0 chr2 133565201 133565288 -119691295 - L1M4c LINE L1 -4191 2193 2106 345 236 118 0 chr2 133565286 133565430 -119691153 + L1M4 LINE L1 2272 2432 -3714 * 746 207 35 12 chr2 133565441 133565610 -119690973 + L1MB1 LINE L1 5996 6168 0 1059 259 28 40 chr2 133565611 133565732 -119690851 + L1M4 LINE L1 2426 2547 -3599 2177 116 3 0 chr2 133565732 133566026 -119690557 - AluSg1 SINE Alu -14 295 1 1059 259 28 40 chr2 133566026 133566329 -119690254 + L1M4 LINE L1 2547 2845 -3301 349 238 30 20 chr2 133566332 133566433 -119690150 + MER63 DNA MER1_type 488 589 -472 2132 124 0 7 chr2 133566440 133566739 -119689844 - AluSq SINE Alu -14 299 3 216 0 0 0 chr2 133566745 133566769 -119689814 + (T)n Simple_repeat Simple_repeat 1 24 0 633 90 0 0 chr2 133566783 133566872 -119689711 + AluSp/q SINE Alu 208 296 -17 1737 126 48 7 chr2 133566872 133567142 -119689441 - AluSx SINE Alu -31 281 1 318 115 66 33 chr2 133567143 133567204 -119689379 + MER63 DNA MER1_type 594 656 -405 272 276 29 48 chr2 133567266 133567371 -119689212 + MER58B DNA MER1_type 239 341 0 607 276 178 34 chr2 133567373 133567728 -119688855 + MER63 DNA MER1_type 651 1056 -4 1524 165 86 7 chr2 133567851 133568142 -119688441 - MLT1C LTR MaLR 0 467 154 1198 165 88 98 chr2 133568143 133568278 -119688305 + AluJo SINE Alu 1 136 -174 2320 85 17 0 chr2 133568278 133568571 -119688012 + AluSc SINE Alu 1 298 -11 1198 165 88 98 chr2 133568571 133568591 -119687992 + AluJo SINE Alu 136 155 -155 2355 101 0 7 chr2 133568591 133568897 -119687686 + AluSc SINE Alu 1 304 -5 1198 165 88 98 chr2 133568897 133569053 -119687530 + AluJo SINE Alu 155 310 0 867 151 110 0 chr2 133569054 133569200 -119687383 - MLT1C LTR MaLR -305 162 1 1463 236 0 6 chr2 133569269 133569583 -119687000 - AluJb SINE Alu 0 312 1 1759 166 3 43 chr2 133569974 133570121 -119686462 + AluJo SINE Alu 1 152 -160 2156 132 0 7 chr2 133570121 133570431 -119686152 + AluSx SINE Alu 1 308 -4 1759 166 3 43 chr2 133570431 133570608 -119685975 + AluJo SINE Alu 152 312 0 1934 238 126 43 chr2 133570681 133570880 -119685703 + L2 LINE L2 2074 2255 -1059 2117 92 10 33 chr2 133570880 133571185 -119685398 - AluSp SINE Alu -15 298 1 1934 238 126 43 chr2 133571185 133571438 -119685145 + L2 LINE L2 2255 2486 -828 1236 169 153 16 chr2 133571438 133571687 -119684896 + AluSx SINE Alu 1 283 -29 227 31 31 0 chr2 133571690 133571722 -119684861 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1934 238 126 43 chr2 133571722 133572026 -119684557 + L2 LINE L2 2487 2898 -416 229 100 0 0 chr2 133572028 133572058 -119684525 + SATR1 Satellite Satellite 49 78 -392 1705 179 66 6 chr2 133572100 133572177 -119684406 + MER7A DNA MER2_type 2 73 -2965 2243 102 3 0 chr2 133572177 133572472 -119684111 + AluSp SINE Alu 1 296 -17 1705 179 66 6 chr2 133572472 133572713 -119683870 + MER7A DNA MER2_type 73 337 -9 * 3004 202 64 25 chr2 133572711 133573447 -119683136 + Tigger6b DNA MER2_type 152 916 -681 527 155 29 19 chr2 133573421 133573524 -119683059 + Tigger6b DNA MER2_type 1071 1174 -423 * 2235 60 0 8 chr2 133573524 133573791 -119682792 - AluY SINE Alu -46 265 1 235 304 0 67 chr2 133573999 133574134 -119682449 + L2 LINE L2 3163 3288 -25 2237 92 30 0 chr2 133574275 133574570 -119682013 + AluSc SINE Alu 1 304 -5 1958 142 0 32 chr2 133574853 133575169 -119681414 + AluSx SINE Alu 1 306 -6 376 286 40 40 chr2 133575203 133575378 -119681205 - MIR SINE MIR -17 245 71 776 136 27 68 chr2 133575388 133575535 -119681048 + FAM SINE Alu 4 144 -41 310 250 21 69 chr2 133575890 133576034 -119680549 - HAL1 LINE L1 -21 2486 2350 429 317 27 5 chr2 133576127 133576313 -119680270 - L2 LINE L2 -1293 2021 1832 484 229 52 81 chr2 133576313 133576584 -119679999 + L1MC5 LINE L1 7145 7407 -554 1335 229 42 80 chr2 133576584 133577061 -119679522 + MLT1C LTR MaLR 9 467 0 1157 198 118 48 chr2 133577062 133577502 -119679081 + L1MC5 LINE L1 7394 7864 -97 2398 88 0 3 chr2 133577518 133577824 -119678759 - AluSx SINE Alu -7 305 1 576 253 143 12 chr2 133577978 133578308 -119678275 + L1ME LINE L1 5439 5806 -356 582 163 0 10 chr2 133578321 133578561 -119678022 + AluJb SINE Alu 15 300 -12 2047 99 9 224 chr2 133578690 133579248 -119677335 + LTR21B LTR ERV1 1 438 0 250 275 111 53 chr2 133579347 133579518 -119677065 - L2 LINE L2 -1482 1832 1652 405 88 50 0 chr2 133579690 133579770 -119676813 + LTR21B LTR ERV1 222 305 -133 377 89 57 0 chr2 133579770 133580094 -119676489 + LTR21B LTR ERV1 220 305 -133 1478 71 33 0 chr2 133580094 133580347 -119676236 + LTR21B LTR ERV1 220 438 0 1254 282 193 17 chr2 133580460 133581413 -119675170 - L2 LINE L2 -1496 1818 698 563 192 58 0 chr2 133581528 133581648 -119674935 + Charlie5 DNA MER1_type 1 127 -2485 * 746 124 25 8 chr2 133581646 133581767 -119674816 + Charlie5 DNA MER1_type 2235 2357 -255 494 270 107 28 chr2 133581767 133582019 -119674564 - L2 LINE L2 -2815 499 228 294 229 153 32 chr2 133582029 133582186 -119674397 - HAL1 LINE L1 -1074 1433 1258 2659 249 91 65 chr2 133582315 133583569 -119673014 - HAL1 LINE L1 -1218 1289 3 4034 131 38 39 chr2 133583964 133584750 -119671833 + LTR1 LTR ERV1 1 785 0 2212 129 0 3 chr2 133585522 133585825 -119670758 - AluSx SINE Alu -10 302 1 180 197 16 82 chr2 133585955 133586016 -119670567 - MIR SINE MIR -105 157 101 317 219 0 0 chr2 133586239 133586303 -119670280 + MER116 DNA Mariner 17 80 0 1683 164 10 32 chr2 133586480 133586791 -119669792 + AluJo SINE Alu 1 304 -8 1821 176 0 7 chr2 133586912 133587196 -119669387 + AluJb SINE Alu 6 287 -25 2110 85 7 4 chr2 133587442 133587714 -119668869 - AluY SINE Alu -16 295 23 1590 211 10 3 chr2 133588998 133589306 -119667277 + AluJo SINE Alu 1 310 -2 1376 156 5 0 chr2 133589308 133589519 -119667064 + AluSx SINE Alu 1 212 -100 1392 187 38 25 chr2 133589649 133589745 -119666838 - Charlie5 DNA MER1_type -70 2554 2461 1616 147 35 21 chr2 133589745 133590031 -119666552 - AluJo SINE Alu -22 290 1 1392 187 38 25 chr2 133590031 133590314 -119666269 - Charlie5 DNA MER1_type -163 2461 13 1977 163 0 0 chr2 133590364 133590671 -119665912 - AluJo SINE Alu -5 307 1 2104 120 10 17 chr2 133590685 133590984 -119665599 - AluSx SINE Alu -15 297 1 483 153 12 0 chr2 133591141 133591226 -119665357 + L1PA15 LINE L1 6068 6153 -12 23 0 0 0 chr2 133591239 133591262 -119665321 + AT_rich Low_complexity Low_complexity 1 23 0 545 336 62 30 chr2 133592038 133592144 -119664439 + L1M4 LINE L1 3525 3626 -2520 974 213 6 0 chr2 133592144 133592318 -119664265 - FAM SINE Alu 0 175 1 545 336 62 30 chr2 133592318 133592648 -119663935 + L1M4 LINE L1 3626 3975 -2171 1450 158 154 0 chr2 133592648 133592740 -119663843 + AluJb SINE Alu 1 78 -224 1801 153 0 4 chr2 133592740 133593008 -119663575 + AluSx SINE Alu 33 299 -13 1450 158 154 0 chr2 133593008 133593175 -119663408 + AluJb SINE Alu 78 300 -2 2294 241 100 27 chr2 133593454 133594513 -119662070 + L1MC4 LINE L1 6484 7897 -145 834 213 6 6 chr2 133595172 133595332 -119661251 + FRAM SINE Alu 3 162 -4 2193 124 20 0 chr2 133596231 133596529 -119660054 + AluSx SINE Alu 1 304 -8 2090 117 43 7 chr2 133597729 133598028 -119658555 + AluSg SINE Alu 1 310 0 696 210 12 24 chr2 133599152 133599319 -119657264 + FRAM SINE Alu 1 165 -1 505 130 185 0 chr2 133599690 133599782 -119656801 + AluJb SINE Alu 187 295 -17 1574 154 63 7 chr2 133599943 133600229 -119656354 + Tigger3(Golem) DNA MER2_type 2727 3028 -1 381 82 0 0 chr2 133600332 133600381 -119656202 - AluSc SINE Alu -8 291 243 227 164 0 15 chr2 133651085 133651152 -119605431 + CT-rich Low_complexity Low_complexity 4 69 0 713 263 23 27 chr2 133651171 133651430 -119605153 + L1MB7 LINE L1 5927 6184 0 989 173 3 3 chr2 133652049 133653391 -119603192 + ALR/Alpha Satellite centromeric 1 1342 0 237 33 0 0 chr2 133655058 133655088 -119601495 + (CA)n Simple_repeat Simple_repeat 2 31 0 249 294 34 8 chr2 133657191 133657310 -119599273 + L2 LINE L2 2937 3058 -214 358 274 79 30 chr2 133658495 133658659 -119597924 - L1ME LINE L1 -426 5695 5524 1812 144 0 17 chr2 133658704 133658996 -119597587 - AluSx SINE Alu -20 292 6 223 382 47 29 chr2 133659365 133659535 -119597048 - MIR SINE MIR -50 212 40 242 272 87 11 chr2 133661736 133661828 -119594755 + MIR SINE MIR 107 205 -57 287 272 272 0 chr2 133662661 133662786 -119593797 + MIR SINE MIR 2 160 -102 324 338 59 10 chr2 133664030 133664234 -119592349 - L1ME LINE L1 -690 5474 5261 374 206 98 33 chr2 133665668 133665760 -119590823 - MIR SINE MIR -119 143 46 2215 216 47 2 chr2 133667523 133668008 -119588575 - MLT2B2 LTR ERVL -8 507 1 5386 187 40 73 chr2 133672940 133673922 -119582661 - L1MB3 LINE L1 -2 6181 5168 2177 113 0 19 chr2 133673922 133674233 -119582350 - AluSp SINE Alu -8 305 1 5386 187 40 73 chr2 133674233 133674699 -119581884 - L1MB3 LINE L1 -1015 5168 4688 842 216 0 0 chr2 133674699 133674852 -119581731 - AluJb SINE Alu -12 300 148 5386 187 40 73 chr2 133674852 133675553 -119581030 - L1MB3 LINE L1 -1495 4688 4011 1375 202 82 15 chr2 133675553 133675895 -119580688 - MLT1A1 LTR MaLR 0 365 1 5386 187 40 73 chr2 133675895 133676325 -119580258 - L1MB3 LINE L1 -2172 4011 3568 311 256 26 0 chr2 133676406 133676484 -119580099 + MIR SINE MIR 74 153 -55 405 0 0 0 chr2 133677062 133677107 -119579476 + (CA)n Simple_repeat Simple_repeat 1 45 0 1024 272 74 54 chr2 133680615 133680779 -119575804 - L1ME LINE L1 -1993 4153 3994 1555 131 52 79 chr2 133680779 133681084 -119575499 - AluSx SINE Alu -15 297 1 1024 272 74 54 chr2 133681084 133681514 -119575069 - L1ME LINE L1 -2152 3994 3547 306 232 26 93 chr2 133681553 133681704 -119574879 - L1MC4 LINE L1 0 8042 7902 183 286 33 55 chr2 133682072 133682163 -119574420 - MIR SINE MIR -111 151 63 269 287 69 0 chr2 133682334 133682421 -119574162 + MIR SINE MIR 110 202 -60 212 333 24 12 chr2 133685724 133685808 -119570775 - MIR SINE MIR -122 140 56 1968 116 49 0 chr2 133686985 133687270 -119569313 + AluSx SINE Alu 1 299 -13 544 220 54 65 chr2 133689780 133689948 -119566635 + MIR SINE MIR 33 198 -64 525 243 80 44 chr2 133690063 133690289 -119566294 - MLT1J LTR MaLR -51 460 227 936 154 6 59 chr2 133691960 133692129 -119564454 - FRAM SINE Alu -6 160 1 198 0 0 0 chr2 133692417 133692439 -119564144 + (A)n Simple_repeat Simple_repeat 1 22 0 2112 86 7 26 chr2 133695334 133695636 -119560947 + AluSx SINE Alu 1 296 -16 242 194 0 32 chr2 133695764 133695826 -119560757 - L1ME LINE L1 -320 5850 5791 312 390 123 18 chr2 133695854 133696195 -119560388 - L1ME LINE L1 -441 5729 5353 1448 261 143 39 chr2 133696198 133696780 -119559803 - HAL1 LINE L1 0 2507 1987 2001 125 48 3 chr2 133696780 133697075 -119559508 - AluSx SINE Alu -4 308 1 1448 261 143 39 chr2 133697075 133697184 -119559399 - HAL1 LINE L1 -520 1987 1891 212 0 0 35 chr2 133697184 133697213 -119559370 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1448 261 143 39 chr2 133697213 133697440 -119559143 - HAL1 LINE L1 -616 1891 1492 281 257 139 7 chr2 133697505 133697649 -119558934 - HAL1 LINE L1 -1137 1370 1208 189 179 0 0 chr2 133700659 133700698 -119555885 + MIR SINE MIR 82 120 -88 332 293 154 60 chr2 133706572 133707039 -119549544 - L1MC4 LINE L1 -5 8037 7527 2410 65 10 0 chr2 133707049 133707357 -119549226 + AluY SINE Alu 1 311 0 2062 103 17 3 chr2 133708080 133708372 -119548211 + AluSx SINE Alu 1 296 -16 207 187 0 0 chr2 133709204 133709243 -119547340 + MIR SINE MIR 113 152 -56 2012 98 30 3 chr2 133709243 133709538 -119547045 + AluSq SINE Alu 1 303 -10 187 130 43 22 chr2 133709631 133709677 -119546906 - MER5A DNA MER1_type -29 160 114 1725 249 55 29 chr2 133711141 133711564 -119545019 + MLT1J LTR MaLR 2 441 -70 2117 112 16 0 chr2 133711564 133711869 -119544714 + AluSq SINE Alu 1 310 -3 1725 249 55 29 chr2 133711869 133711935 -119544648 + MLT1J LTR MaLR 441 504 -7 1605 190 3 13 chr2 133712137 133712448 -119544135 + AluJo SINE Alu 1 308 -4 304 324 83 28 chr2 133712470 133712686 -119543897 + HAL1 LINE L1 1114 1341 -1166 310 238 27 14 chr2 133712772 133712919 -119543664 + (TA)n Simple_repeat Simple_repeat 1 149 0 1810 125 10 40 chr2 133713490 133713794 -119542789 - AluSx SINE Alu -17 295 1 2758 239 47 9 chr2 133713794 133714583 -119542000 - L1MDa LINE L1 -3076 3464 2643 1757 161 0 40 chr2 133714620 133714942 -119541641 - AluJb SINE Alu -3 309 1 7947 163 67 54 chr2 133714956 133716280 -119540303 - L1MDa LINE L1 -3892 2648 1342 1578 171 25 7 chr2 133716280 133716594 -119539989 - AluSx SINE Alu 0 319 1 7947 163 67 54 chr2 133716594 133717395 -119539188 - L1MDa LINE L1 -5198 1342 553 2352 118 15 56 chr2 133717395 133717583 -119539000 + THE1C LTR MaLR 1 195 -180 2220 84 7 0 chr2 133717583 133717879 -119538704 + AluSp SINE Alu 1 298 -15 180 0 0 0 chr2 133717879 133717899 -119538684 + (TA)n Simple_repeat Simple_repeat 2 21 0 2352 118 15 56 chr2 133717899 133718100 -119538483 + THE1C LTR MaLR 193 375 0 7947 163 67 54 chr2 133718100 133718228 -119538355 - L1MDa LINE L1 -5987 553 31 1893 104 29 11 chr2 133718304 133718629 -119537954 - AluSq SINE Alu 0 330 1 2451 106 89 52 chr2 133719297 133719489 -119537094 + MER4B LTR ERV1 1 184 -582 2136 111 0 0 chr2 133719489 133719787 -119536796 + AluSx SINE Alu 1 298 -14 2451 106 89 52 chr2 133719787 133719921 -119536662 + MER4B LTR ERV1 184 312 -454 2095 102 14 0 chr2 133719921 133720216 -119536367 + AluSx SINE Alu 1 299 -13 2451 106 89 52 chr2 133720216 133720460 -119536123 + MER4B LTR ERV1 312 754 -12 2240 95 0 0 chr2 133720460 133720754 -119535829 - AluSq SINE Alu -19 294 1 575 239 125 0 chr2 133720851 133721035 -119535548 + LTR16C LTR ERVL 285 491 0 265 227 51 45 chr2 133721678 133721854 -119534729 + (TATG)n Simple_repeat Simple_repeat 4 180 0 1392 246 60 5 chr2 133722140 133722554 -119534029 - L1ME LINE L1 -371 6073 5637 * 3261 158 42 19 chr2 133722552 133722984 -119533599 - L1MC1 LINE L1 -31 6302 5851 2388 72 0 3 chr2 133722984 133723289 -119533294 + AluSx SINE Alu 1 304 -8 3261 158 42 19 chr2 133723289 133723449 -119533134 - L1MC1 LINE L1 -482 5851 5696 4819 235 41 39 chr2 133723451 133723817 -119532766 - L1ME LINE L1 -2214 4212 3848 1812 156 3 23 chr2 133723817 133723954 -119532629 + AluSx SINE Alu 1 139 -173 2108 116 3 0 chr2 133723954 133724257 -119532326 + AluSp SINE Alu 1 304 -9 1812 156 3 23 chr2 133724257 133724420 -119532163 + AluSx SINE Alu 139 295 -17 4819 235 41 39 chr2 133724420 133724990 -119531593 - L1ME LINE L1 -2578 3848 3281 2455 165 5 15 chr2 133724990 133725390 -119531193 + MSTD LTR MaLR 1 396 0 4819 235 41 39 chr2 133725390 133726101 -119530482 - L1ME LINE L1 -3145 3281 2561 392 74 0 0 chr2 133726102 133726156 -119530427 - Alu SINE Alu -1 300 247 516 133 0 0 chr2 133726157 133726240 -119530343 + (TG)n Simple_repeat Simple_repeat 2 84 0 2245 85 3 0 chr2 133726271 133726566 -119530017 - AluSp SINE Alu -17 296 1 9611 135 107 100 chr2 133726567 133726747 -119529836 - L1ME LINE L1 -3955 2471 2294 2162 107 3 0 chr2 133726747 133727047 -119529536 + AluSx SINE Alu 2 302 -10 9611 135 107 100 chr2 133727047 133727389 -119529194 - L1ME LINE L1 -4132 2294 1956 850 96 0 0 chr2 133727389 133727504 -119529079 - AluSq/x SINE Alu -197 115 1 9611 135 107 100 chr2 133727504 133728774 -119527809 - L1ME LINE L1 -4470 1956 696 1956 124 7 10 chr2 133728774 133729081 -119527502 + L1MA4A LINE L1 5995 6300 -3 1532 166 34 20 chr2 133729085 133729381 -119527202 + AluJb SINE Alu 1 300 -12 9611 135 107 100 chr2 133729381 133729902 -119526681 - L1ME LINE L1 -5732 694 20 520 250 47 24 chr2 133729930 133730142 -119526441 - L1M4 LINE L1 -830 5316 5100 1167 263 42 48 chr2 133730143 133730423 -119526160 + MLT1J LTR MaLR 153 432 -79 2204 108 0 0 chr2 133730423 133730729 -119525854 - AluSx SINE Alu -6 306 1 1167 263 42 48 chr2 133730729 133730806 -119525777 + MLT1J LTR MaLR 432 508 -3 181 352 0 0 chr2 133730882 133730936 -119525647 - MER5A DNA MER1_type 0 189 136 195 300 22 56 chr2 133731020 133731110 -119525473 - MER5B DNA MER1_type -85 93 7 311 229 68 112 chr2 133731308 133731506 -119525077 + MIR SINE MIR 21 203 -59 1917 148 0 3 chr2 133731506 133731804 -119524779 - AluSx SINE Alu -15 297 1 311 229 68 112 chr2 133731804 133731845 -119524738 + MIR SINE MIR 203 244 -18 1846 146 3 3 chr2 133732275 133732570 -119524013 + AluJo SINE Alu 6 300 -12 1832 188 12 68 chr2 133732618 133732732 -119523851 + MLT1B LTR MaLR 1 120 -270 801 203 74 0 chr2 133732732 133732895 -119523688 + FAM SINE Alu 1 175 0 1832 188 12 68 chr2 133732895 133733189 -119523394 + MLT1B LTR MaLR 120 386 -4 1651 158 30 7 chr2 133733531 133733834 -119522749 - MER89 LTR ERV1 0 559 250 722 108 0 0 chr2 133733834 133733927 -119522656 + AluSq/x SINE Alu 43 135 -178 1777 156 14 0 chr2 133733927 133734215 -119522368 + AluSx SINE Alu 1 292 -20 1063 219 31 23 chr2 133734217 133734473 -119522110 - MER89 LTR ERV1 -296 263 6 246 228 95 2 chr2 133734670 133734783 -119521800 + L1MC5 LINE L1 7805 8042 0 599 254 115 49 chr2 133735298 133735490 -119521093 + L2 LINE L2 2497 2716 -598 1966 106 46 0 chr2 133735490 133735773 -119520810 + AluSp SINE Alu 6 301 -12 599 254 115 49 chr2 133735773 133735868 -119520715 + L2 LINE L2 2716 2803 -511 272 238 36 12 chr2 133736004 133736088 -119520495 + MLT1F LTR MaLR 282 367 -175 212 237 0 0 chr2 133736268 133736306 -119520277 + (TG)n Simple_repeat Simple_repeat 2 39 0 253 290 51 39 chr2 133736571 133736771 -119519812 - L1MC/D LINE L1 -353 5821 5725 2051 109 3 0 chr2 133737149 133737442 -119519141 - AluSq SINE Alu -4 309 16 938 234 74 0 chr2 133737663 133737920 -119518663 - MER119 DNA MER1_type -5 578 303 600 129 0 20 chr2 133738970 133739071 -119517512 + AluJb SINE Alu 134 232 -80 440 136 0 0 chr2 133739171 133739237 -119517346 - AluS SINE Alu -242 67 2 2072 115 3 6 chr2 133739348 133739661 -119516922 + AluSx SINE Alu 1 312 0 427 203 58 58 chr2 133739779 133739917 -119516666 - MIR SINE MIR -70 192 55 955 245 117 29 chr2 133740258 133740634 -119515949 + MLT1I LTR MaLR 1 409 0 303 256 183 7 chr2 133740670 133740807 -119515776 + MIR SINE MIR 101 261 -1 322 261 63 43 chr2 133741025 133741324 -119515259 - L1ME4a LINE L1 -6 6115 5811 295 267 40 10 chr2 133741396 133741497 -119515086 - L2 LINE L2 -21 3251 3148 1231 310 69 47 chr2 133741632 133742354 -119514229 + L1MEd LINE L1 72 809 -5310 314 297 65 26 chr2 133742517 133742768 -119513815 - MLT1L LTR MaLR -2 597 352 926 165 0 9 chr2 133742840 133743189 -119513394 + (CCA)n Simple_repeat Simple_repeat 1 345 0 221 291 13 13 chr2 133743707 133743786 -119512797 + MIR SINE MIR 178 256 -6 2088 113 0 19 chr2 133743801 133744120 -119512463 - AluSq SINE Alu 0 313 1 227 139 222 56 chr2 133744456 133744528 -119512055 - L1M4 LINE L1 -2323 3823 3740 3485 237 96 6 chr2 133744773 133746417 -119510166 - L1ME2 LINE L1 -7 6952 5153 3726 224 61 47 chr2 133746417 133747432 -119509151 - L1ME2 LINE L1 -2123 4818 3779 1478 191 4 0 chr2 133747432 133747704 -119508879 - AluJb SINE Alu -10 302 30 3726 224 61 47 chr2 133747704 133747958 -119508625 - L1ME2 LINE L1 -3162 3779 3530 708 146 0 0 chr2 133748055 133748158 -119508425 + MER6B DNA MER2_type 1 103 -173 2111 111 3 3 chr2 133748159 133748457 -119508126 - AluSq SINE Alu -15 298 1 2376 242 61 55 chr2 133748472 133749081 -119507502 - L1ME2 LINE L1 -3427 3514 2910 180 0 0 0 chr2 133749081 133749101 -119507482 + (TTTTG)n Simple_repeat Simple_repeat 5 24 0 2376 242 61 55 chr2 133749101 133749211 -119507372 - L1ME2 LINE L1 -4031 2910 2802 1011 179 61 0 chr2 133749211 133749407 -119507176 + MER6B DNA MER2_type 2 209 -1 2376 242 61 55 chr2 133749407 133749421 -119507162 - L1ME2 LINE L1 -4139 2802 2790 1390 84 42 76 chr2 133749421 133749568 -119507015 + MER30 DNA MER1_type 1 139 -91 1893 119 18 0 chr2 133749568 133749846 -119506737 + AluSx SINE Alu 14 296 -16 1390 84 42 76 chr2 133749846 133749936 -119506647 + MER30 DNA MER1_type 139 230 0 2376 242 61 55 chr2 133749936 133750585 -119505998 - L1ME2 LINE L1 -4151 2790 2147 2123 108 0 3 chr2 133750585 133750882 -119505701 + AluSc SINE Alu 1 296 -13 2376 242 61 55 chr2 133750882 133751625 -119504958 - L1ME2 LINE L1 -4794 2147 1208 354 285 136 22 chr2 133751756 133751984 -119504599 - L1ME2 LINE L1 -6104 319 66 345 314 118 57 chr2 133751986 133752317 -119504266 + L1ME LINE L1 4903 5253 -893 310 260 61 31 chr2 133752318 133752359 -119504224 + L1P5 LINE L1 5255 5293 -863 1857 118 30 0 chr2 133752359 133752660 -119503923 + AluSc SINE Alu 1 309 0 310 260 61 31 chr2 133752660 133752813 -119503770 + L1P5 LINE L1 5293 5455 -701 2098 120 0 3 chr2 133752870 133753171 -119503412 + AluSq SINE Alu 1 300 -13 423 0 0 0 chr2 133753172 133753219 -119503364 + (TA)n Simple_repeat Simple_repeat 2 48 0 286 29 0 0 chr2 133753219 133753253 -119503330 + tRNA-Cys-TGC tRNA tRNA 2 35 -40 948 292 120 27 chr2 133753253 133753654 -119502929 - L2 LINE L2 -13 3300 2863 727 253 99 31 chr2 133753695 133753988 -119502595 + L1ME LINE L1 5512 5824 -297 1930 94 49 0 chr2 133753988 133754253 -119502330 + AluSg SINE Alu 1 278 -32 231 36 0 0 chr2 133754257 133754285 -119502298 + (GAAA)n Simple_repeat Simple_repeat 3 30 0 24 32 0 0 chr2 133754344 133754375 -119502208 + AT_rich Low_complexity Low_complexity 1 31 0 1927 113 0 7 chr2 133754580 133754882 -119501701 + AluSg1 SINE Alu 1 300 0 682 304 75 73 chr2 133754916 133755489 -119501094 + L1ME4a LINE L1 5478 6051 -70 206 296 106 15 chr2 133755828 133755960 -119500623 + MER5B DNA MER1_type 6 149 -29 2439 84 3 0 chr2 133756380 133756689 -119499894 - AluSp SINE Alu -3 310 1 621 221 156 45 chr2 133756698 133756942 -119499641 - L1MD2 LINE L1 0 6359 6089 769 258 23 9 chr2 133758044 133758265 -119498318 + L1MDb LINE L1 8 231 -6178 313 309 79 30 chr2 133758387 133758552 -119498031 + MIR SINE MIR 84 256 -6 752 227 22 0 chr2 133758634 133758804 -119497779 - MIR SINE MIR -59 203 32 332 259 78 6 chr2 133759087 133759243 -119497340 + MIR SINE MIR 59 233 -29 28 61 0 0 chr2 133761243 133761292 -119495291 + GC_rich Low_complexity Low_complexity 1 49 0 26 74 0 0 chr2 133761494 133761548 -119495035 + GC_rich Low_complexity Low_complexity 1 54 0 206 266 0 31 chr2 133762423 133762487 -119494096 + MIR SINE MIR 84 145 -63 378 291 108 54 chr2 133762674 133762897 -119493686 + MIR SINE MIR 14 248 -14 190 84 28 70 chr2 133764566 133764637 -119491946 + (CGGGG)n Simple_repeat Simple_repeat 2 69 0 492 130 11 22 chr2 133767254 133767346 -119489237 - AluYb8 SINE Alu 0 318 228 221 281 11 54 chr2 133767350 133767535 -119489048 + CT-rich Low_complexity Low_complexity 2 178 0 237 302 0 0 chr2 133768894 133768957 -119487626 + MIR SINE MIR 181 243 -19 2161 100 3 0 chr2 133769381 133769671 -119486912 - AluSg SINE Alu -19 291 1 1845 164 0 26 chr2 133769677 133769982 -119486601 - AluJb SINE Alu -15 297 1 2319 135 105 3 chr2 133770030 133770422 -119486161 + Tigger2a DNA MER2_type 1 432 -2 24 32 0 0 chr2 133770426 133770457 -119486126 + AT_rich Low_complexity Low_complexity 1 31 0 1722 134 22 0 chr2 133770457 133770733 -119485850 - AluSg SINE Alu -11 299 18 247 330 0 0 chr2 133771318 133771418 -119485165 - MER117 DNA MER1_type -39 158 59 213 39 0 0 chr2 133772328 133772354 -119484229 + (CAAAA)n Simple_repeat Simple_repeat 3 28 0 232 174 0 58 chr2 133772375 133772444 -119484139 - L1ME4a LINE L1 -7 6114 6050 361 299 24 40 chr2 133773183 133773349 -119483234 + MIR SINE MIR 7 168 -63 238 353 67 25 chr2 133773504 133773623 -119482960 - MIR SINE MIR -71 137 13 268 237 40 0 chr2 133775585 133775661 -119480922 + L2 LINE L2 1922 2000 -1314 253 328 85 11 chr2 133775754 133775943 -119480640 + LTR16A LTR ERVL 134 336 -114 262 308 84 14 chr2 133776978 133777121 -119479462 + HERV16 LTR ERVL 1059 1211 -3785 751 227 88 99 chr2 133777429 133777794 -119478789 + MLT1A1 LTR MaLR 5 365 0 2359 96 3 0 chr2 133780184 133780496 -119476087 - AluSp SINE Alu 0 313 1 973 251 127 30 chr2 133780527 133780997 -119475586 - MLT1F1 LTR MaLR -7 560 43 438 310 155 0 chr2 133781012 133781251 -119475332 + MLT1G1 LTR MaLR 6 281 -314 275 222 42 0 chr2 133781367 133781439 -119475144 + MLT1G1 LTR MaLR 473 547 -48 199 367 48 27 chr2 133784488 133784635 -119471948 - L2 LINE L2 -541 2773 2624 208 0 30 30 chr2 133784759 133784792 -119471791 + (GGGTG)n Simple_repeat Simple_repeat 1 33 0 242 301 86 0 chr2 133786355 133786460 -119470123 - MIR SINE MIR -104 104 44 820 173 22 39 chr2 133788792 133788971 -119467612 + FRAM SINE Alu 1 40 0 242 323 0 0 chr2 133789146 133789211 -119467372 + (CA)n Simple_repeat Simple_repeat 2 66 0 296 314 26 51 chr2 133790754 133790910 -119465673 + L2 LINE L2 2932 3083 -189 212 167 0 0 chr2 133791000 133791042 -119465541 + (TGAA)n Simple_repeat Simple_repeat 3 44 0 486 269 14 41 chr2 133791327 133791472 -119465111 + MIR SINE MIR 46 186 -76 402 287 19 0 chr2 133791944 133792052 -119464531 + MER81 DNA DNA 1 110 -4 456 327 138 16 chr2 133792300 133792758 -119463825 - L2 LINE L2 -27 3245 2724 248 267 13 0 chr2 133792796 133792871 -119463712 - MIR3 SINE MIR -52 156 81 6061 218 92 47 chr2 133793884 133794180 -119462403 + L1MDa LINE L1 1 282 -6258 2138 132 0 3 chr2 133794180 133794491 -119462092 + AluSx SINE Alu 1 310 -2 6061 218 92 47 chr2 133794491 133795026 -119461557 + L1MDa LINE L1 282 792 -5748 2277 79 3 0 chr2 133795026 133795317 -119461266 + AluSp SINE Alu 1 292 -21 6061 218 92 47 chr2 133795317 133796323 -119460260 + L1MDa LINE L1 792 1751 -4789 1833 144 23 13 chr2 133796323 133796628 -119459955 + AluSx SINE Alu 2 309 -3 6061 218 92 47 chr2 133796628 133797880 -119458703 + L1MDa LINE L1 1751 2945 -3595 210 37 0 0 chr2 133797880 133797907 -119458676 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6061 218 92 47 chr2 133797907 133798218 -119458365 + L1MDa LINE L1 2945 3241 -3299 2223 95 0 3 chr2 133798218 133798512 -119458071 + AluSg SINE Alu 1 293 -17 6061 218 92 47 chr2 133798512 133799222 -119457361 + L1MDa LINE L1 3241 3918 -2622 2247 110 0 0 chr2 133799222 133799531 -119457052 + AluSx SINE Alu 1 309 -3 6061 218 92 47 chr2 133799531 133799635 -119456948 + L1MDa LINE L1 3918 5524 -1016 705 231 45 9 chr2 133799851 133799915 -119456668 + L1MDa LINE L1 5596 5656 -918 240 35 0 0 chr2 133799915 133799944 -119456639 + (TA)n Simple_repeat Simple_repeat 2 30 0 705 231 45 9 chr2 133799944 133800100 -119456483 + L1MDa LINE L1 5656 5830 -744 315 267 29 29 chr2 133800939 133801044 -119455539 - MIR SINE MIR -108 154 50 246 358 89 0 chr2 133801821 133801944 -119454639 - MIR SINE MIR -62 200 67 1056 194 171 4 chr2 133802333 133802650 -119453933 + MER47B DNA MER2_type 10 417 -1 1939 146 34 88 chr2 133803085 133803270 -119453313 - THE1B LTR MaLR 0 364 209 2095 125 7 0 chr2 133803270 133803565 -119453018 - AluSx SINE Alu -13 299 3 1939 146 34 88 chr2 133803565 133803764 -119452819 - THE1B LTR MaLR -155 209 1 1199 306 45 42 chr2 133803789 133804676 -119451907 + L1MEd LINE L1 368 1257 -4862 311 373 133 28 chr2 133804690 133805044 -119451539 + L1M2 LINE L1 1560 1950 -4899 253 245 300 17 chr2 133805376 133805537 -119451046 - MIR SINE MIR -65 197 13 1760 181 72 31 chr2 133807150 133807509 -119449074 + MLT1A2 LTR MaLR 1 374 0 366 282 0 0 chr2 133807985 133808070 -119448513 + MIR SINE MIR 47 131 -131 801 332 47 61 chr2 133808098 133808692 -119447891 - HAL1 LINE L1 -770 1737 1152 310 219 86 47 chr2 133808726 133808854 -119447729 + HAL1 LINE L1 947 1079 -1428 249 215 25 63 chr2 133808939 133809018 -119447565 + MER5A DNA MER1_type 4 79 -110 1063 72 7 0 chr2 133809077 133809215 -119447368 - AluSq/x SINE Alu -174 139 1 2110 174 34 47 chr2 133809395 133809524 -119447059 + MLT1C LTR MaLR 3 132 -335 2347 56 0 3 chr2 133809524 133809811 -119446772 + AluSc SINE Alu 1 286 -23 2110 174 34 47 chr2 133809811 133810152 -119446431 + MLT1C LTR MaLR 132 467 0 195 100 0 0 chr2 133811179 133811209 -119445374 + (ATTAG)n Simple_repeat Simple_repeat 5 34 0 464 198 25 137 chr2 133811910 133812008 -119444575 + L1MA9 LINE L1 5954 6021 -291 2249 96 0 0 chr2 133812008 133812309 -119444274 + AluSx SINE Alu 1 301 -11 464 198 25 137 chr2 133812309 133812407 -119444176 + L1MA9 LINE L1 6021 6128 -184 1074 366 3 74 chr2 133812427 133812752 -119443831 - AluSx SINE Alu 0 302 1 2112 77 14 0 chr2 133812783 133813068 -119443515 + AluSg SINE Alu 1 289 -21 2048 100 3 3 chr2 133813078 133813368 -119443215 + AluSg SINE Alu 1 290 -20 2154 107 3 0 chr2 133813377 133813686 -119442897 + AluSg SINE Alu 1 310 0 234 203 13 51 chr2 133813687 133813766 -119442817 + L1ME3 LINE L1 5197 5272 -874 876 279 79 30 chr2 133813804 133814310 -119442273 + L1ME3 LINE L1 5296 5826 -336 1062 82 0 0 chr2 133814446 133814581 -119442002 + AluY SINE Alu 1 135 -176 1829 109 72 0 chr2 133814582 133814858 -119441725 + AluSx SINE Alu 2 297 -15 2019 97 0 40 chr2 133814860 133815159 -119441424 + AluSg SINE Alu 1 287 -23 1086 199 87 73 chr2 133815164 133815400 -119441183 + L1MD2 LINE L1 1778 2009 -4531 2072 107 0 3 chr2 133815400 133815690 -119440893 + AluSg SINE Alu 10 298 -12 1086 199 87 73 chr2 133815690 133815758 -119440825 + L1MD2 LINE L1 2009 2075 -4465 1776 186 0 0 chr2 133815758 133816064 -119440519 + AluSx SINE Alu 5 310 -2 1086 199 87 73 chr2 133816064 133816184 -119440399 + L1MD2 LINE L1 2075 2209 -4331 805 156 80 3 chr2 133816184 133816424 -119440159 - MER7A DNA MER2_type -1 335 8 652 193 10 47 chr2 133816424 133816616 -119439967 + L1MD2 LINE L1 2211 2395 -4145 2233 93 0 19 chr2 133816647 133816958 -119439625 - AluY SINE Alu -6 305 1 224 143 20 0 chr2 133816958 133816999 -119439584 + CT-rich Low_complexity Low_complexity 7 51 0 327 236 91 18 chr2 133817034 133817144 -119439439 + L1MD2 LINE L1 2384 2501 -4039 749 167 0 0 chr2 133817248 133817426 -119439157 - AluSg/x SINE Alu 0 347 170 2123 101 0 0 chr2 133817427 133817714 -119438869 + AluSx SINE Alu 24 310 -2 1183 206 128 28 chr2 133817716 133817876 -119438707 + L1MD2 LINE L1 2524 2667 -3873 2423 151 53 17 chr2 133817876 133818287 -119438296 - MSTC LTR MaLR -2 426 1 1183 206 128 28 chr2 133818287 133818554 -119438029 + L1MD2 LINE L1 2667 2994 -3546 1984 156 29 43 chr2 133818557 133818791 -119437792 - MSTB LTR MaLR 0 426 197 1949 143 3 7 chr2 133818791 133819098 -119437485 - AluJo SINE Alu -6 306 1 1984 156 29 43 chr2 133819098 133819209 -119437374 - MSTB LTR MaLR -229 197 86 273 62 0 0 chr2 133819214 133819246 -119437337 - MSTB LTR MaLR -309 117 86 273 62 0 0 chr2 133819251 133819283 -119437300 - MSTB2 LTR MaLR -324 133 102 273 62 0 0 chr2 133819288 133819320 -119437263 - MSTB2 LTR MaLR -324 133 102 273 62 0 0 chr2 133819325 133819357 -119437226 - MSTB2 LTR MaLR -324 133 102 273 62 0 0 chr2 133819362 133819394 -119437189 - MSTB LTR MaLR -309 117 86 273 62 0 0 chr2 133819399 133819431 -119437152 - MSTB LTR MaLR -309 117 86 273 62 0 0 chr2 133819436 133819468 -119437115 - MSTB LTR MaLR -309 117 86 273 62 0 0 chr2 133819473 133819505 -119437078 - MSTB LTR MaLR -309 117 86 273 62 0 0 chr2 133819510 133819542 -119437041 - MSTB LTR MaLR -309 117 86 * 819 161 25 23 chr2 133819528 133819702 -119436881 - MSTB LTR MaLR -250 178 1 1146 239 23 3 chr2 133819715 133820025 -119436558 + L1MD2 LINE L1 3006 3321 -3219 528 197 63 24 chr2 133820029 133820156 -119436427 + FLAM_C SINE Alu 2 133 0 1857 166 0 0 chr2 133820191 133820493 -119436090 + AluJb SINE Alu 1 302 -10 720 182 65 65 chr2 133820496 133820710 -119435873 + L1MD2 LINE L1 3913 4126 -2414 843 150 0 34 chr2 133820713 133820833 -119435750 + MSTC LTR MaLR 282 398 -30 2399 169 97 31 chr2 133820833 133820972 -119435611 + LTR49 LTR ERV1 2 130 -465 2076 109 0 0 chr2 133820972 133821281 -119435302 + AluSq SINE Alu 1 309 0 2399 169 97 31 chr2 133821281 133821696 -119434887 + LTR49 LTR ERV1 130 594 -1 843 150 0 34 chr2 133821696 133821722 -119434861 + MSTC LTR MaLR 398 423 -5 877 182 104 41 chr2 133821727 133821797 -119434786 + L1MD2 LINE L1 5752 5816 -820 2211 104 3 3 chr2 133821797 133822104 -119434479 + AluSx SINE Alu 1 307 -5 877 182 104 41 chr2 133822104 133822253 -119434330 + L1MD2 LINE L1 5816 5985 -651 2995 113 80 24 chr2 133822253 133822834 -119433749 - MER4B LTR ERV1 0 779 1 560 145 22 87 chr2 133822834 133822936 -119433647 + L1MD2 LINE L1 5985 6077 -676 1840 134 0 33 chr2 133822936 133823242 -119433341 + AluJb SINE Alu 1 296 -16 560 145 22 87 chr2 133823242 133823277 -119433306 + L1MD2 LINE L1 6077 6113 -640 763 125 0 8 chr2 133823278 133823398 -119433185 + MER4B LTR ERV1 2 120 -490 1634 145 50 63 chr2 133823400 133823717 -119432866 + MER4E LTR ERV1 467 779 0 263 209 0 30 chr2 133823718 133823785 -119432798 + L1MD2 LINE L1 6111 6175 -578 855 129 8 0 chr2 133823789 133823913 -119432670 + FLAM_C SINE Alu 1 125 -8 2472 207 73 57 chr2 133823939 133824653 -119431930 - MER50 LTR ERV1 0 734 10 526 171 9 57 chr2 133824659 133824764 -119431819 + AluJb SINE Alu 147 246 -66 2222 67 0 10 chr2 133824785 133825083 -119431500 + AluY SINE Alu 2 296 -15 406 143 16 0 chr2 133825177 133825240 -119431343 + AluJb SINE Alu 234 297 -5 1695 225 47 51 chr2 133825244 133825816 -119430767 + L1MD2 LINE L1 6158 6728 -25 21 0 0 0 chr2 133825816 133825837 -119430746 + AT_rich Low_complexity Low_complexity 1 21 0 1981 112 0 0 chr2 133825907 133826209 -119430374 - AluSg SINE Alu 0 304 3 2180 105 0 0 chr2 133826974 133827268 -119429315 - AluSp SINE Alu -19 294 1 578 192 65 113 chr2 133827278 133827418 -119429165 + L1ME4a LINE L1 5150 5295 -871 2051 105 10 7 chr2 133827418 133827714 -119428869 - AluSq SINE Alu -16 297 1 578 192 65 113 chr2 133827714 133827892 -119428691 + L1ME4a LINE L1 5295 5468 -698 665 161 40 16 chr2 133827892 133828016 -119428567 - FRAM SINE Alu -20 156 30 2159 107 6 186 chr2 133828017 133828540 -119428043 - LTR12 LTR ERV1 -234 480 52 236 265 0 0 chr2 133828542 133828591 -119427992 - LTR30 LTR ERV1 -673 49 1 778 160 15 0 chr2 133828637 133828768 -119427815 - FLAM_C SINE Alu 0 133 1 1142 252 4 11 chr2 133828770 133829036 -119427547 + L1ME4a LINE L1 5458 5721 -445 808 168 63 32 chr2 133829565 133829755 -119426828 + AluJo SINE Alu 117 312 0 530 257 168 86 chr2 133829822 133830212 -119426371 + HAL1 LINE L1 1564 1921 -586 2138 122 0 0 chr2 133830212 133830516 -119426067 + AluSx SINE Alu 1 304 -8 530 257 168 86 chr2 133830516 133830527 -119426056 + HAL1 LINE L1 1921 1930 -577 186 43 0 0 chr2 133830527 133830550 -119426033 + (CAGAGA)n Simple_repeat Simple_repeat 2 24 0 530 257 168 86 chr2 133830550 133830719 -119425864 + HAL1 LINE L1 1930 2084 -423 1352 197 121 25 chr2 133830719 133831075 -119425508 - MLT1B LTR MaLR 0 390 1 530 257 168 86 chr2 133831075 133831268 -119425315 + HAL1 LINE L1 2084 2392 -115 390 57 0 0 chr2 133831299 133831352 -119425231 + (TG)n Simple_repeat Simple_repeat 1 53 0 725 181 0 0 chr2 133831364 133831480 -119425103 - FLAM_C SINE Alu -15 118 3 2155 109 0 0 chr2 133831497 133831800 -119424783 - AluSq SINE Alu -10 303 1 261 372 15 5 chr2 133832124 133832320 -119424263 + MLT1L LTR MaLR 418 615 0 2089 132 0 0 chr2 133832381 133832692 -119423891 + AluSx SINE Alu 1 311 -1 344 250 243 7 chr2 133832720 133832860 -119423723 + L1ME4a LINE L1 5945 6117 -4 29 28 0 0 chr2 133832900 133832936 -119423647 + AT_rich Low_complexity Low_complexity 1 36 0 328 173 67 40 chr2 133833007 133833082 -119423501 + L1MB4 LINE L1 3668 3744 -2402 769 211 13 0 chr2 133833098 133833250 -119423333 + AluJb SINE Alu 120 273 -39 1174 198 125 35 chr2 133833269 133833422 -119423161 + L1MB4 LINE L1 5237 5375 -799 1930 136 7 3 chr2 133833422 133833723 -119422860 + AluJb SINE Alu 1 302 -10 1174 198 125 35 chr2 133833723 133833912 -119422671 + L1MB4 LINE L1 5375 5609 -565 1074 103 0 4 chr2 133833914 133834119 -119422464 + AluSc SINE Alu 2 294 -15 1394 136 21 8 chr2 133834119 133834355 -119422228 + L1MB4 LINE L1 5598 5836 -344 1158 213 59 26 chr2 133834355 133834660 -119421923 + MLT1A2 LTR MaLR 1 315 -59 25 0 0 0 chr2 133834660 133834685 -119421898 + AT_rich Low_complexity Low_complexity 1 25 0 1343 189 44 47 chr2 133834821 133836328 -119420255 - SVA Other Other -683 868 432 313 150 12 113 chr2 133836328 133836355 -119420228 + MLT1A2 LTR MaLR 291 319 -46 1853 165 0 15 chr2 133836355 133836694 -119419889 + MER1B DNA MER1_type 4 337 0 313 150 12 113 chr2 133836694 133836746 -119419837 + MLT1A2 LTR MaLR 319 362 -3 1887 156 11 20 chr2 133836763 133836903 -119419680 + L1MB4 LINE L1 5835 5975 -205 1965 117 3 26 chr2 133836903 133837212 -119419371 + AluSx SINE Alu 1 302 -10 1887 156 11 20 chr2 133837212 133837418 -119419165 + L1MB4 LINE L1 5975 6178 -2 740 200 0 0 chr2 133837445 133837575 -119419008 + FLAM_A SINE Alu 1 130 -3 266 183 28 56 chr2 133837575 133837646 -119418937 + L1M4 LINE L1 2481 2549 -3597 4987 248 72 46 chr2 133837646 133838101 -119418482 - L1M4 LINE L1 -740 5674 5232 2053 115 7 7 chr2 133838101 133838397 -119418186 - AluSg1 SINE Alu -13 296 1 4987 248 72 46 chr2 133838397 133839096 -119417487 - L1M4 LINE L1 -1182 5232 4553 1760 176 0 0 chr2 133839096 133839386 -119417197 + AluJb SINE Alu 4 293 -19 4987 248 72 46 chr2 133839386 133839660 -119416923 - L1M4 LINE L1 -1861 4553 4288 2051 122 3 0 chr2 133839660 133839954 -119416629 - AluSx SINE Alu -17 295 1 4987 248 72 46 chr2 133839954 133840454 -119416129 - L1M4 LINE L1 -2126 4288 3632 1635 152 0 15 chr2 133840456 133840725 -119415858 + AluSq SINE Alu 1 265 -48 231 321 0 12 chr2 133841458 133841542 -119415041 - L1M4 LINE L1 -6219 165 83 358 269 85 65 chr2 133841619 133841820 -119414763 - L1MEc LINE L1 -3941 2443 2239 920 119 0 21 chr2 133841828 133841971 -119414612 - FLAM_C SINE Alu -3 140 1 1937 96 59 0 chr2 133841975 133842246 -119414337 - AluSq SINE Alu -22 291 5 547 291 62 8 chr2 133842278 133842631 -119413952 - L1MEc LINE L1 -4268 2295 1903 2137 41 16 85 chr2 133842632 133842948 -119413635 - AluY SINE Alu -16 295 2 869 113 0 43 chr2 133842948 133843089 -119413494 - AluSq/x SINE Alu -177 135 1 24 0 0 0 chr2 133843111 133843135 -119413448 + AT_rich Low_complexity Low_complexity 1 24 0 1991 124 0 0 chr2 133843353 133843661 -119412922 - AluY SINE Alu 0 308 1 2255 49 0 7 chr2 133843911 133844195 -119412388 - AluY SINE Alu -7 304 23 525 252 128 44 chr2 133844721 133844805 -119411778 - L1MEc LINE L1 -4677 1886 1810 2077 92 10 3 chr2 133844805 133845100 -119411483 - AluSx SINE Alu -15 297 1 525 252 128 44 chr2 133845100 133845336 -119411247 - L1MEc LINE L1 -4753 1810 1539 866 203 101 55 chr2 133845360 133845785 -119410798 - MER74A LTR ERVL -36 522 1 488 221 64 44 chr2 133845788 133845992 -119410591 - L1MEc LINE L1 -4946 1334 1127 353 167 77 71 chr2 133845996 133846059 -119410524 + L1MA9 LINE L1 5996 6057 -255 1801 139 0 0 chr2 133846059 133846325 -119410258 + AluSx SINE Alu 1 266 -46 2184 102 0 0 chr2 133846325 133846619 -119409964 + AluSg SINE Alu 1 295 -15 353 167 77 71 chr2 133846619 133846763 -119409820 + L1MA9 LINE L1 6056 6302 -10 296 291 122 9 chr2 133846848 133846917 -119409666 - L1MEc LINE L1 -5303 1069 1009 1923 142 0 3 chr2 133846917 133847212 -119409371 - AluJb SINE Alu -18 294 1 296 291 122 9 chr2 133847212 133847355 -119409228 - L1MEc LINE L1 -5363 1009 833 328 257 80 18 chr2 133848019 133848132 -119408451 + L1ME3A LINE L1 6046 6165 -5 628 85 0 0 chr2 133849354 133849436 -119407147 - AluS SINE Alu -229 83 2 1078 123 0 29 chr2 133849926 133849947 -119406636 + AluSp SINE Alu 117 137 -176 2137 108 0 16 chr2 133849947 133850254 -119406329 + AluSx SINE Alu 1 302 -10 1078 123 0 29 chr2 133850254 133850403 -119406180 + AluSp SINE Alu 137 282 -31 2076 98 7 24 chr2 133850955 133851251 -119405332 + AluSx SINE Alu 1 291 -21 2466 72 0 0 chr2 133851310 133851617 -119404966 - AluSc SINE Alu -2 307 1 2197 96 3 0 chr2 133852634 133852937 -119403646 - AluSg SINE Alu -6 304 1 430 329 139 57 chr2 133854974 133855576 -119401007 - L1MD1 LINE L1 -305 5937 5286 724 157 70 105 chr2 133855686 133855858 -119400725 - AluJb SINE Alu -18 294 129 354 171 0 0 chr2 133855903 133855973 -119400610 + L1MA5A LINE L1 6228 6297 0 1976 99 3 75 chr2 133856170 133856492 -119400091 + AluSx SINE Alu 1 299 -13 24 0 0 0 chr2 133857839 133857863 -119398720 + AT_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr2 133857885 133857905 -119398678 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 1737 153 3 3 chr2 133857907 133858189 -119398394 - AluSx SINE Alu -30 282 1 228 170 0 75 chr2 133858766 133858783 -119397800 + Alu SINE Alu 122 139 -163 1777 134 0 8 chr2 133858783 133859044 -119397539 + AluJo SINE Alu 46 304 -8 1801 106 113 18 chr2 133859044 133859326 -119397257 + AluSg SINE Alu 1 309 -1 228 170 0 75 chr2 133859044 133859079 -119397504 + Alu SINE Alu 139 170 -132 2187 119 0 16 chr2 133859532 133859842 -119396741 + AluSx SINE Alu 1 305 -7 298 237 26 77 chr2 133859998 133860154 -119396429 + L1ME3A LINE L1 6023 6170 0 216 0 0 0 chr2 133860552 133860576 -119396007 + (TC)n Simple_repeat Simple_repeat 1 24 0 * 261 0 0 0 chr2 133860575 133860604 -119395979 + (CA)n Simple_repeat Simple_repeat 1 29 0 344 258 120 64 chr2 133861378 133861800 -119394783 + L1MC4a LINE L1 5605 6110 -1698 2407 88 3 0 chr2 133861800 133862096 -119394487 - AluSx SINE Alu -15 297 1 344 258 120 64 chr2 133862096 133862190 -119394393 + L1MC4a LINE L1 6110 6197 -1611 688 179 0 58 chr2 133862619 133862775 -119393808 + MIR SINE MIR 101 247 -15 329 276 60 0 chr2 133865470 133865586 -119390997 + MIR3 SINE MIR 79 201 -7 2152 99 24 0 chr2 133868083 133868375 -119388208 - AluSq SINE Alu -6 307 9 2155 93 45 7 chr2 133869914 133870205 -119386378 + AluSq SINE Alu 1 302 -11 1189 209 19 4 chr2 133870772 133871031 -119385552 + L1ME1 LINE L1 5839 6101 -65 2469 179 43 2 chr2 133871162 133871648 -119384935 + L1MB7 LINE L1 5679 6184 0 2266 111 3 0 chr2 133872708 133873006 -119383577 + AluSx SINE Alu 1 299 -13 1600 202 34 3 chr2 133875120 133875417 -119381166 - AluJo SINE Alu -6 306 1 2152 141 0 3 chr2 133875437 133875750 -119380833 - AluSx SINE Alu 0 312 1 720 193 108 0 chr2 133876253 133876419 -119380164 + MER5A DNA MER1_type 6 189 0 420 172 43 11 chr2 133876967 133877060 -119379523 - MER5A DNA MER1_type -85 104 9 247 314 49 10 chr2 133877621 133877723 -119378860 + MER5B DNA MER1_type 57 162 -16 760 252 103 52 chr2 133877798 133878223 -119378360 + L1MC4 LINE L1 7484 7930 -112 412 239 51 22 chr2 133878281 133878419 -119378164 + L1MC4 LINE L1 7901 8042 0 1488 202 0 0 chr2 133878482 133878734 -119377849 + AluJb SINE Alu 30 281 -31 2178 105 3 0 chr2 133878814 133879099 -119377484 - AluSx SINE Alu -26 286 1 1332 151 143 16 chr2 133879112 133879370 -119377213 - AluJo SINE Alu -21 291 1 216 0 0 0 chr2 133880332 133880356 -119376227 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1344 166 85 12 chr2 133880359 133880618 -119375965 - AluJb SINE Alu -34 278 1 309 233 83 33 chr2 133880630 133880750 -119375833 - L1ME LINE L1 -305 5816 5691 2558 48 3 0 chr2 133880788 133881081 -119375502 - AluY SINE Alu -17 294 1 571 127 0 0 chr2 133882063 133882142 -119374441 - AluSg/x SINE Alu -18 294 216 1877 135 26 50 chr2 133882173 133882617 -119373966 + L1MB7 LINE L1 5181 5613 -567 540 213 49 12 chr2 133882797 133882961 -119373622 + L1MC5 LINE L1 6976 7145 -816 200 248 54 87 chr2 133885081 133885116 -119371467 + L2 LINE L2 2707 2742 -572 2311 98 0 10 chr2 133885116 133885421 -119371162 + AluSg SINE Alu 1 302 -8 200 248 54 87 chr2 133885421 133885534 -119371049 + L2 LINE L2 2742 2850 -464 1011 260 82 36 chr2 133885805 133886302 -119370281 + L1ME3A LINE L1 5651 6170 0 2215 105 0 38 chr2 133887645 133887959 -119368624 + AluSx SINE Alu 1 302 -10 23 33 0 0 chr2 133889928 133889958 -119366625 + AT_rich Low_complexity Low_complexity 1 30 0 249 146 0 0 chr2 133890404 133890452 -119366131 + (TG)n Simple_repeat Simple_repeat 2 49 0 1265 167 128 0 chr2 133890766 133891023 -119365560 + L1MB7 LINE L1 5741 6030 -154 1653 193 30 27 chr2 133892572 133892940 -119363643 - MLT1A2 LTR MaLR -5 369 1 316 227 13 0 chr2 133893172 133893247 -119363336 - MIR SINE MIR -112 150 75 554 296 34 13 chr2 133893288 133893521 -119363062 + Charlie1 DNA MER1_type 1 238 -2523 551 174 35 83 chr2 133893504 133893560 -119363023 + Charlie1 DNA MER1_type 2620 2677 -84 * 721 278 40 0 chr2 133893560 133893758 -119362825 + MER63A DNA MER1_type 5 210 0 551 174 35 83 chr2 133893758 133893845 -119362738 + Charlie1 DNA MER1_type 2677 2756 -5 1223 171 197 3 chr2 133894331 133894630 -119361953 - MSTB1 LTR MaLR -6 426 70 2379 72 3 0 chr2 133895383 133895674 -119360909 - AluSp SINE Alu -21 292 1 317 325 75 16 chr2 133895847 133896035 -119360548 - MIR SINE MIR -52 210 12 264 309 91 40 chr2 133896418 133896693 -119359890 + MLT1K LTR MaLR 133 421 -167 266 257 0 76 chr2 133896734 133896839 -119359744 + MLT1L LTR MaLR 1 97 -518 4008 210 64 6 chr2 133896883 133898367 -119358216 + L1MB7 LINE L1 4390 5966 -212 337 109 0 0 chr2 133898370 133898416 -119358167 - MSTB LTR MaLR 0 426 381 1948 129 54 0 chr2 133898418 133898696 -119357887 + AluSx SINE Alu 3 295 -17 335 137 0 0 chr2 133898699 133898750 -119357833 + tRNA-Cys-TGC tRNA tRNA 1 51 -24 * 2448 105 81 3 chr2 133898735 133899107 -119357476 - MSTB LTR MaLR -25 401 1 736 143 137 50 chr2 133899107 133899289 -119357294 + L1MB7 LINE L1 5965 6162 -22 257 239 28 0 chr2 133899294 133899365 -119357218 + MLT1L LTR MaLR 535 607 -8 1140 178 0 0 chr2 133899460 133899651 -119356932 + L1MC4a LINE L1 5471 5661 -517 2752 128 14 34 chr2 133900366 133900759 -119355824 - MSTC LTR MaLR 0 428 42 2118 124 3 0 chr2 133900759 133901071 -119355512 - AluSx SINE Alu 0 313 1 2752 128 14 34 chr2 133901071 133901113 -119355470 - MSTC LTR MaLR -386 42 1 1986 242 53 55 chr2 133901597 133902089 -119354494 - L1ME3A LINE L1 -238 5932 5433 2376 187 79 40 chr2 133902089 133902635 -119353948 - MLT1F1 LTR MaLR 0 567 1 1986 242 53 55 chr2 133902635 133903019 -119353564 - L1ME3A LINE L1 -737 5433 5050 359 224 0 12 chr2 133903022 133903107 -119353476 + MLT2F LTR ERVL 4 87 -576 556 175 17 58 chr2 133903186 133903306 -119353277 + MLT1E3 LTR MaLR 51 165 -459 540 104 0 0 chr2 133903304 133903381 -119353202 + HY1 scRNA scRNA 34 110 -2 * 276 236 0 69 chr2 133903394 133903466 -119353117 + MLT1E3 LTR MaLR 156 222 -402 297 167 68 98 chr2 133903484 133903616 -119352967 + MLT2C1 LTR ERVL 269 396 -1 541 234 55 45 chr2 133903616 133903817 -119352766 - L1ME3A LINE L1 -1091 5055 4853 2210 116 0 0 chr2 133904144 133904458 -119352125 - AluSq SINE Alu 0 314 1 3161 92 26 9 chr2 133904662 133905120 -119351463 + L1MA3 LINE L1 5840 6305 0 299 368 42 9 chr2 133905426 133905638 -119350945 + L1MC4a LINE L1 5760 5978 -1830 204 40 0 0 chr2 133908251 133908276 -119348307 + (TTA)n Simple_repeat Simple_repeat 3 27 0 6799 62 1 1 chr2 133908276 133909120 -119347463 - L1PA6 LINE L1 -18 6136 5293 22 0 0 0 chr2 133909120 133909142 -119347441 + AT_rich Low_complexity Low_complexity 1 22 0 44006 31 22 1 chr2 133909142 133915166 -119341417 - L1HS LINE L1 0 6155 5 1311 238 107 16 chr2 133915454 133915828 -119340755 - MER77 LTR ERV1 -2 603 196 1800 204 27 5 chr2 133915857 133916230 -119340353 + MLT1B LTR MaLR 3 383 -7 729 206 25 69 chr2 133916246 133916450 -119340133 - MER77 LTR ERV1 -410 195 1 1216 188 147 95 chr2 133916450 133916913 -119339670 - MLT1D LTR MaLR -18 487 1 736 254 77 18 chr2 133917805 133918077 -119338506 - MLT1L LTR MaLR -324 291 4 329 290 102 73 chr2 133918281 133918881 -119337702 - L2 LINE L2 -666 2648 2032 2102 94 13 7 chr2 133919561 133919859 -119336724 - AluSp SINE Alu -13 300 1 233 278 62 45 chr2 133919890 133920066 -119336517 + HAL1 LINE L1 971 1149 -1358 350 303 54 5 chr2 133920384 133920569 -119336014 + HAL1 LINE L1 1613 1806 -701 2138 84 35 0 chr2 133920785 133921072 -119335511 + AluSx SINE Alu 1 297 -15 843 196 13 0 chr2 133921776 133921929 -119334654 + MER6A DNA MER2_type 1 155 -450 1179 246 75 57 chr2 133921930 133922488 -119334095 + LTR24B LTR ERV1 1 568 -8 1210 194 57 50 chr2 133922489 133922659 -119333924 + MER6A DNA MER2_type 153 68 -797 1940 77 34 27 chr2 133922659 133922833 -119333750 - AluY SINE Alu -12 299 121 246 32 0 0 chr2 133922833 133922864 -119333719 + (TTG)n Simple_repeat Simple_repeat 3 33 0 1940 77 34 27 chr2 133922864 133922986 -119333597 - AluY SINE Alu -190 121 1 1210 194 57 50 chr2 133922986 133923098 -119333485 + MER6A DNA MER2_type 67 177 -428 741 202 0 7 chr2 133923200 133923638 -119332945 + (ATGGTG)n Simple_repeat Simple_repeat 1 434 0 595 224 11 0 chr2 133923603 133923777 -119332806 + (ATG)n Simple_repeat Simple_repeat 1 176 0 * 228 211 211 74 chr2 133923791 133923886 -119332697 - MIR SINE MIR -147 115 8 4330 157 14 40 chr2 133924926 133925277 -119331306 - L1MA9 LINE L1 -161 6151 5792 267 31 0 0 chr2 133925277 133925309 -119331274 + (TG)n Simple_repeat Simple_repeat 1 32 0 4330 157 14 40 chr2 133925309 133925809 -119330774 - L1MA9 LINE L1 -520 5792 5322 1876 147 6 10 chr2 133925810 133926123 -119330460 - AluSx SINE Alu 0 312 1 449 139 13 13 chr2 133926188 133926267 -119330316 + HSMAR2 DNA Mariner 2 80 -1222 351 306 48 34 chr2 133926367 133926514 -119330069 - L1ME LINE L1 -501 5661 5513 1735 127 74 11 chr2 133926571 133926855 -119329728 - AluSx SINE Alu -10 302 1 247 342 104 45 chr2 133927098 133927452 -119329131 + L2 LINE L2 2890 3264 -8 379 325 18 43 chr2 133927470 133927633 -119328950 - L2 LINE L2 0 3313 3155 579 285 115 60 chr2 133927750 133928010 -119328573 + L2 LINE L2 2874 3167 -146 1985 121 3 13 chr2 133928010 133928323 -119328260 - AluSx SINE Alu -2 310 1 579 285 115 60 chr2 133928323 133928479 -119328104 + L2 LINE L2 3167 3313 0 805 276 4 4 chr2 133928526 133928765 -119327818 + L1ME1 LINE L1 5595 5833 -331 226 248 68 51 chr2 133928795 133928912 -119327671 + L1ME1 LINE L1 6003 6121 -45 306 264 203 7 chr2 133929297 133929445 -119327138 + MER5A DNA MER1_type 13 189 0 208 289 67 11 chr2 133929448 133929538 -119327045 + MIR SINE MIR 105 199 -63 296 235 31 20 chr2 133929997 133930095 -119326488 + CT-rich Low_complexity Low_complexity 3 101 0 474 18 0 0 chr2 133931741 133931796 -119324787 + (TG)n Simple_repeat Simple_repeat 2 56 0 389 197 51 29 chr2 133932222 133932359 -119324224 + L1MB3 LINE L1 3139 3278 -2868 1711 207 14 31 chr2 133932362 133932782 -119323801 + L1MB3 LINE L1 4915 5327 -819 4114 150 53 45 chr2 133932814 133933350 -119323233 + L1MB3 LINE L1 5297 5827 -356 1831 141 6 39 chr2 133933350 133933662 -119322921 + AluSq SINE Alu 1 302 -11 4114 150 53 45 chr2 133933662 133933953 -119322630 + L1MB3 LINE L1 5827 6134 -49 2138 99 7 0 chr2 133933953 133934245 -119322338 + AluSc SINE Alu 1 294 -15 4114 150 53 45 chr2 133934245 133934288 -119322295 + L1MB3 LINE L1 6134 6175 -8 352 255 163 0 chr2 133934360 133934544 -119322039 - L1ME LINE L1 -327 5794 5581 288 77 0 0 chr2 133934560 133934599 -119321984 + (CA)n Simple_repeat Simple_repeat 2 40 0 4672 230 52 15 chr2 133934612 133934843 -119321740 + L1M4b LINE L1 84 305 -6554 1642 144 133 32 chr2 133934843 133935182 -119321401 + THE1C LTR MaLR 3 375 0 4672 230 52 15 chr2 133935182 133935997 -119320586 + L1M4b LINE L1 305 1169 -5690 707 246 14 53 chr2 133935997 133936354 -119320229 + L1M4b LINE L1 1644 1986 -4869 2311 87 0 13 chr2 133936365 133936675 -119319908 + AluY SINE Alu 1 306 -5 2454 159 60 2 chr2 133936686 133937089 -119319494 + MSTB LTR MaLR 1 426 0 8597 193 46 1 chr2 133937089 133938665 -119317918 + MSTB-int LTR MaLR 1 1646 -5 2394 135 56 42 chr2 133938670 133939078 -119317505 + MSTB LTR MaLR 1 414 -12 816 280 77 33 chr2 133939079 133939598 -119316985 + L1M4b LINE L1 1990 2687 -4451 342 303 79 43 chr2 133939619 133940169 -119316414 + L1M4 LINE L1 1731 2271 -3944 1234 234 101 39 chr2 133940262 133940677 -119315906 - MER77 LTR ERV1 -11 594 154 2657 3 0 0 chr2 133940785 133941078 -119315505 + AluYa5 SINE Alu 1 293 -18 9752 232 34 16 chr2 133941207 133944365 -119312218 + L1M4 LINE L1 2501 5716 -537 * 10259 188 32 9 chr2 133944363 133946866 -119309717 - L1M2 LINE L1 -647 5665 3112 466 211 0 0 chr2 133946869 133946983 -119309600 - L1M4 LINE L1 -3211 2935 2822 268 170 0 0 chr2 133947243 133947290 -119309293 - L1MC3 LINE L1 -1539 6246 6200 1956 101 10 14 chr2 133947298 133947594 -119308989 + AluSx SINE Alu 15 309 -3 1514 125 0 0 chr2 133947595 133947811 -119308772 + L1PA16 LINE L1 5828 6043 -123 264 231 0 0 chr2 133947811 133947863 -119308720 + LTR30 LTR ERV1 1 52 -670 1561 131 87 31 chr2 133947863 133948201 -119308382 + LTR12 LTR ERV1 53 714 0 764 116 16 39 chr2 133948202 133948331 -119308252 + L1PA16 LINE L1 6041 6166 0 223 341 98 41 chr2 133950465 133950588 -119305995 - MIR3 SINE MIR -66 142 13 2232 98 3 0 chr2 133951208 133951513 -119305070 + AluSx SINE Alu 1 306 -6 222 316 141 17 chr2 133951597 133951774 -119304809 - L2 LINE L2 -91 3222 3024 1475 114 180 12 chr2 133952761 133953016 -119303567 + AluSg1 SINE Alu 1 298 -11 749 255 63 43 chr2 133953033 133953288 -119303295 + LTR40a LTR ERVL 260 519 0 306 325 92 8 chr2 133954159 133954279 -119302304 - L2 LINE L2 0 3272 3143 225 148 19 37 chr2 133955172 133955226 -119301357 + (GGGTG)n Simple_repeat Simple_repeat 2 54 0 1809 192 86 0 chr2 133955778 133956138 -119300445 - LTR32 LTR ERVL -72 399 9 1789 280 25 14 chr2 133956428 133956981 -119299602 + L1MCb LINE L1 4 562 -5483 1027 249 20 67 chr2 133957121 133957373 -119299210 + L1M4 LINE L1 3452 3679 -2467 2261 104 0 0 chr2 133957373 133957681 -119298902 + AluSq SINE Alu 1 308 -5 1027 249 20 67 chr2 133957681 133957833 -119298750 + L1M4 LINE L1 3679 3837 -2309 864 158 0 0 chr2 133958841 133958974 -119297609 + AluSq/x SINE Alu 1 133 -180 208 169 102 17 chr2 133959533 133959592 -119296991 - L2 LINE L2 -18 3254 3191 229 320 0 0 chr2 133960041 133960116 -119296467 - MIR SINE MIR -116 146 72 2195 98 0 0 chr2 133961331 133961626 -119294957 - AluSx SINE Alu -12 300 6 1945 69 109 0 chr2 133961686 133961962 -119294621 - AluYa5 SINE Alu -5 306 1 454 295 36 0 chr2 133961976 133962115 -119294468 - L1ME LINE L1 -425 5696 5553 1515 204 21 31 chr2 133962492 133962934 -119293649 - LTR2B LTR ERV1 0 490 1 477 224 32 16 chr2 133963116 133963241 -119293342 + LTR67 LTR ERVL 429 555 -2 244 277 135 77 chr2 133963303 133963577 -119293006 + L2 LINE L2 2983 3272 0 4232 62 48 0 chr2 133964282 133964846 -119291737 - LTR10C LTR ERV1 0 591 1 2092 127 0 0 chr2 133964894 133965201 -119291382 + AluSg SINE Alu 1 307 -3 758 179 12 29 chr2 133965212 133965477 -119291106 + GA-rich Low_complexity Low_complexity 1 260 0 3733 209 94 42 chr2 133965595 133965925 -119290658 - L1MD2 LINE L1 -10 6743 6431 2144 102 0 0 chr2 133965925 133966220 -119290363 + AluSq SINE Alu 1 295 -18 3733 209 94 42 chr2 133966220 133967281 -119289302 - L1MD2 LINE L1 -322 6431 5273 1185 225 18 33 chr2 133967292 133967345 -119289238 + L1ME1 LINE L1 5838 5890 -276 2101 100 7 0 chr2 133967345 133967645 -119288938 + AluY SINE Alu 1 302 -9 1185 225 18 33 chr2 133967645 133967920 -119288663 + L1ME1 LINE L1 5890 6161 -5 7554 218 60 34 chr2 133967940 133968458 -119288125 - L1MD2 LINE L1 -1286 5254 4751 437 0 19 0 chr2 133968458 133968511 -119288072 + (TG)n Simple_repeat Simple_repeat 1 54 0 1822 140 0 0 chr2 133968520 133968792 -119287791 - AluSg SINE Alu -38 272 1 7554 218 60 34 chr2 133968792 133969143 -119287440 - L1MD2 LINE L1 -1796 4744 4403 2068 107 4 0 chr2 133969143 133969449 -119287134 - AluSx SINE Alu 0 307 1 7554 218 60 34 chr2 133969449 133969932 -119286651 - L1MD2 LINE L1 -2137 4403 3934 1891 158 0 0 chr2 133969932 133970235 -119286348 + AluSx SINE Alu 1 303 -9 7554 218 60 34 chr2 133970235 133972861 -119283722 - L1MD2 LINE L1 -2606 3934 1167 1555 82 0 0 chr2 133972862 133973068 -119283515 + AluY SINE Alu 3 208 -103 5997 120 51 63 chr2 133973068 133974232 -119282351 + pTR5 LTR ERV1 743 2025 -413 400 177 42 31 chr2 133974234 133974330 -119282253 + LTR30 LTR ERV1 546 642 -80 1474 113 5 5 chr2 133974333 133974554 -119282029 + pTR5 LTR ERV1 172 392 -2046 737 79 0 0 chr2 133974554 133974655 -119281928 + AluY SINE Alu 205 305 -6 1633 238 80 40 chr2 133974655 133974789 -119281794 - L1MD2 LINE L1 -5366 1174 1047 2211 82 3 3 chr2 133974789 133975082 -119281501 - AluSc SINE Alu -16 293 1 1633 238 80 40 chr2 133975082 133975686 -119280897 - L1MD2 LINE L1 -5493 1047 1 2450 69 0 0 chr2 133976106 133976412 -119280171 - AluY SINE Alu -5 306 1 190 318 0 15 chr2 133976510 133976576 -119280007 + L2 LINE L2 3207 3271 -1 2118 123 0 0 chr2 133977281 133977589 -119278994 + AluSg SINE Alu 1 308 -2 369 0 0 0 chr2 133977589 133977630 -119278953 + (CA)n Simple_repeat Simple_repeat 2 42 0 387 235 167 56 chr2 133978325 133978487 -119278096 + MIR SINE MIR 81 260 -2 393 242 62 67 chr2 133978890 133979068 -119277515 + L2 LINE L2 2907 3083 -230 1077 59 0 0 chr2 133979095 133979231 -119277352 - AluSp/q SINE Alu -11 302 167 295 295 50 85 chr2 133979237 133979437 -119277146 + L2 LINE L2 3121 3313 0 328 198 10 10 chr2 133979437 133979533 -119277050 + GA-rich Low_complexity Low_complexity 1 96 0 617 147 59 44 chr2 133979707 133979843 -119276740 + L1MA6 LINE L1 6163 6300 0 2150 92 3 0 chr2 133979847 133980130 -119276453 + AluSc SINE Alu 1 284 -25 287 234 60 53 chr2 133980136 133980269 -119276314 + MER5A DNA MER1_type 48 174 -4 356 145 0 26 chr2 133981246 133981322 -119275261 + (GGGGA)n Simple_repeat Simple_repeat 2 75 0 654 109 0 0 chr2 133981435 133981536 -119275047 + (GGGGA)n Simple_repeat Simple_repeat 4 104 0 24 0 0 0 chr2 133981643 133981667 -119274916 + AT_rich Low_complexity Low_complexity 1 24 0 299 316 64 18 chr2 133982190 133982361 -119274222 + MLT1L LTR MaLR 359 537 -78 301 327 26 0 chr2 133982794 133982907 -119273676 + L2 LINE L2 3197 3312 -1 204 288 41 0 chr2 133983405 133983478 -119273105 - MIR SINE MIR -128 134 59 281 370 33 11 chr2 133983734 133983918 -119272665 - L2 LINE L2 -1392 1922 1735 363 262 85 43 chr2 133984866 133985007 -119271576 + L2 LINE L2 3118 3264 -8 549 364 103 37 chr2 133986317 133987028 -119269555 + L3 LINE CR1 683 1440 -137 311 288 38 30 chr2 133987293 133987425 -119269158 - MIR SINE MIR -34 228 96 461 267 57 17 chr2 133987480 133987656 -119268927 + L1MCc LINE L1 14 196 -6227 1431 276 79 42 chr2 133987747 133988709 -119267874 + L1MCc LINE L1 1086 2209 -4732 2043 133 3 3 chr2 133988709 133989017 -119267566 + AluSx SINE Alu 1 308 -4 1431 276 79 42 chr2 133989017 133989302 -119267281 + L1MCc LINE L1 2209 2482 -4459 237 201 168 36 chr2 133989314 133989404 -119267179 - MER58 DNA MER1_type 0 2420 113 273 309 0 0 chr2 133989469 133989550 -119267033 + L1MD1 LINE L1 173 253 -6287 191 81 54 0 chr2 133989573 133989610 -119266973 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 7956 224 71 23 chr2 133989622 133990758 -119265825 + L1MD1 LINE L1 277 1358 -5182 2307 141 39 53 chr2 133990758 133990828 -119265755 - MSTA LTR MaLR 0 428 359 2251 102 0 0 chr2 133990828 133991141 -119265442 + AluSq SINE Alu 1 313 0 2307 141 39 53 chr2 133991141 133991504 -119265079 - MSTA LTR MaLR -69 359 1 7956 224 71 23 chr2 133991504 133991635 -119264948 + L1MD1 LINE L1 1358 1481 -5059 2096 136 0 0 chr2 133991635 133991944 -119264639 + AluSp SINE Alu 1 309 -4 7956 224 71 23 chr2 133991944 133993488 -119263095 + L1MD1 LINE L1 1481 3224 -3316 3672 219 61 36 chr2 133993461 133993684 -119262899 + L1MD1 LINE L1 3491 3707 -2929 * 240 86 0 0 chr2 133993684 133993719 -119262864 + (CAATA)n Simple_repeat Simple_repeat 3 37 0 3672 219 61 36 chr2 133993719 133994569 -119262014 + L1MD1 LINE L1 3707 4534 -2102 7702 123 24 10 chr2 133994569 133995783 -119260800 - Tigger3b DNA MER2_type 0 1231 1 3672 219 61 36 chr2 133995783 133996458 -119260125 + L1MD1 LINE L1 4534 5191 -1445 2065 95 46 20 chr2 133996458 133996762 -119259821 + AluSx SINE Alu 1 312 0 3672 219 61 36 chr2 133996762 133997474 -119259109 + L1MD1 LINE L1 5191 6176 -460 2104 112 3 0 chr2 133997474 133997779 -119258804 + AluY SINE Alu 1 306 -5 3672 219 61 36 chr2 133997779 133998018 -119258565 + L1MD1 LINE L1 6176 6408 -228 205 284 78 29 chr2 133998800 133998902 -119257681 - L2 LINE L2 -29 3243 3137 416 262 83 24 chr2 133999064 133999232 -119257351 + MIR SINE MIR 49 226 -36 346 218 101 34 chr2 133999705 133999842 -119256741 + MIR SINE MIR 47 190 -63 198 268 14 14 chr2 134000048 134000119 -119256464 + L2 LINE L2 2725 2795 -519 1713 136 51 8 chr2 134000149 134000480 -119256103 - MER4A LTR ERV1 0 664 261 549 194 0 0 chr2 134000480 134000578 -119256005 - MER4A LTR ERV1 -566 98 1 481 258 8 8 chr2 134000933 134001191 -119255392 + GA-rich Low_complexity Low_complexity 1 258 0 639 280 72 5 chr2 134002592 134002799 -119253784 - LTR33A LTR ERVL -4 519 299 345 268 45 36 chr2 134002980 134003092 -119253491 - LTR33 LTR ERVL -303 218 85 236 345 123 25 chr2 134003436 134003639 -119252944 - MIR SINE MIR -6 256 34 1112 239 75 38 chr2 134004094 134004466 -119252117 - MLT1B LTR MaLR -4 386 1 329 231 100 39 chr2 134004472 134004602 -119251981 + MIR SINE MIR 12 149 -113 214 188 47 31 chr2 134006179 134006243 -119250340 - MIR SINE MIR -56 152 88 595 293 55 39 chr2 134006295 134006606 -119249977 - MER65B LTR ERV1 -11 520 205 1558 251 50 36 chr2 134007121 134007619 -119248964 - MLT1D LTR MaLR 0 505 1 269 226 71 93 chr2 134008104 134008266 -119248317 - MIR SINE MIR -67 141 11 2193 104 3 0 chr2 134008323 134008631 -119247952 - AluSg SINE Alu -1 309 1 1936 94 50 7 chr2 134009597 134009874 -119246709 + AluSc SINE Alu 1 289 -20 527 184 0 7 chr2 134009883 134010035 -119246548 + GA-rich Low_complexity Low_complexity 1 151 0 3011 236 42 37 chr2 134010452 134011365 -119245218 + L1ME1 LINE L1 4329 5236 -930 2094 105 0 3 chr2 134011365 134011660 -119244923 - AluSx SINE Alu -18 294 1 3011 236 42 37 chr2 134011660 134012569 -119244014 + L1ME1 LINE L1 5236 6160 -6 740 298 107 36 chr2 134012623 134012979 -119243604 + L1M4 LINE L1 3022 3402 -2744 253 340 39 20 chr2 134013061 134013214 -119243369 + L1M4 LINE L1 4524 4679 -1467 499 292 125 22 chr2 134013416 134013728 -119242855 - L2 LINE L2 -1405 1909 1566 215 348 56 0 chr2 134014796 134014885 -119241698 + L2 LINE L2 3152 3245 -27 253 290 206 13 chr2 134014979 134015134 -119241449 - MIR SINE MIR -77 185 1 907 221 42 117 chr2 134015134 134015343 -119241240 - MLT2C2 LTR ERVL -7 457 234 1737 129 4 0 chr2 134015343 134015598 -119240985 + AluSq SINE Alu 7 262 -51 387 0 0 0 chr2 134015602 134015645 -119240938 + (TAAAA)n Simple_repeat Simple_repeat 3 45 0 907 221 42 117 chr2 134015645 134015924 -119240659 - MLT2C2 LTR ERVL -233 231 1 2106 104 0 0 chr2 134016957 134017236 -119239347 + AluSq SINE Alu 1 279 -34 414 57 0 0 chr2 134017241 134017294 -119239289 + (GGGA)n Simple_repeat Simple_repeat 4 56 0 180 111 0 0 chr2 134018831 134018858 -119237725 + (CCCCCT)n Simple_repeat Simple_repeat 4 30 0 349 297 51 0 chr2 134019774 134019892 -119236691 - L2 LINE L2 -2097 1217 1094 329 253 79 49 chr2 134019952 134020206 -119236377 + MLT1G1 LTR MaLR 11 230 -360 513 118 24 24 chr2 134021247 134021374 -119235209 + (TG)n Simple_repeat Simple_repeat 1 127 0 584 285 11 6 chr2 134022039 134022218 -119234365 + Charlie4 DNA MER1_type 1762 1941 -20 184 273 106 0 chr2 134022525 134022591 -119233992 + L2 LINE L2 3169 3241 -31 417 116 0 0 chr2 134022632 134022701 -119233882 + (GA)n Simple_repeat Simple_repeat 1 69 0 192 296 14 28 chr2 134023001 134023072 -119233511 + L2 LINE L2 3200 3269 -3 953 253 147 10 chr2 134023089 134023548 -119233035 + MLT1G1 LTR MaLR 1 483 -47 2681 179 6 14 chr2 134023561 134024047 -119232536 - MER31A LTR ERV1 -3 482 1 2687 170 104 28 chr2 134024047 134024623 -119231960 - MER31A-int LTR ERV1 -20 4916 4297 290 224 0 0 chr2 134024861 134024919 -119231664 - MSTB LTR MaLR -317 109 52 1675 214 19 30 chr2 134024940 134025251 -119231332 - MLT1A1 LTR MaLR 0 365 57 2040 120 23 0 chr2 134025251 134025550 -119231033 - AluSx SINE Alu -6 306 1 1675 214 19 30 chr2 134025550 134025603 -119230980 - MLT1A1 LTR MaLR -308 57 5 183 267 133 0 chr2 134026402 134026477 -119230106 + L3 LINE CR1 1112 1196 -381 2294 97 13 0 chr2 134026478 134026786 -119229797 + AluSx SINE Alu 1 312 0 342 258 13 7 chr2 134026859 134027014 -119229569 + (TG)n Simple_repeat Simple_repeat 1 156 0 2548 156 21 7 chr2 134027453 134027876 -119228707 - MSTB1 LTR MaLR -3 429 1 2443 61 0 13 chr2 134028829 134029139 -119227444 - AluY SINE Alu -5 306 1 2154 157 135 0 chr2 134029443 134029820 -119226763 - MSTA LTR MaLR 0 428 1 258 32 0 0 chr2 134030400 134030431 -119226152 + (TTA)n Simple_repeat Simple_repeat 3 33 0 6471 59 2 1 chr2 134030431 134031279 -119225304 - L1PA6 LINE L1 -18 6136 5288 1343 241 103 16 chr2 134031548 134031925 -119224658 - MER77 LTR ERV1 0 605 196 1828 204 27 5 chr2 134031954 134032327 -119224256 + MLT1B LTR MaLR 3 383 -7 714 211 25 69 chr2 134032343 134032547 -119224036 - MER77 LTR ERV1 -410 195 1 742 231 142 17 chr2 134032547 134032944 -119223639 - MLT1L LTR MaLR -18 487 4 395 302 101 69 chr2 134033143 134033749 -119222834 - L2 LINE L2 -661 2653 2029 2106 95 14 7 chr2 134034428 134034724 -119221859 - AluSp SINE Alu -15 298 1 312 323 102 25 chr2 134034735 134035088 -119221495 + HAL1 LINE L1 941 1320 -1187 369 303 54 5 chr2 134035250 134035435 -119221148 + HAL1 LINE L1 1613 1806 -701 2143 84 35 0 chr2 134035651 134035937 -119220646 + AluSx SINE Alu 1 296 -16 512 248 117 54 chr2 134036724 134037167 -119219416 + L2 LINE L2 2489 3011 -302 201 39 0 0 chr2 134038354 134038380 -119218203 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 611 250 188 15 chr2 134038408 134038748 -119217835 - L2 LINE L2 -46 3267 2869 789 196 132 56 chr2 134038996 134039262 -119217321 + MLT1D LTR MaLR 3 288 -217 722 261 74 0 chr2 134039590 134039805 -119216778 + MLT1D LTR MaLR 275 505 0 389 277 101 58 chr2 134039809 134040156 -119216427 - LTR16A1 LTR ERVL -2 455 94 488 318 21 37 chr2 134040221 134040410 -119216173 - MIR SINE MIR -1 261 76 1283 214 82 6 chr2 134040573 134040890 -119215693 + MER2 DNA MER2_type 1 341 -3 2017 111 3 10 chr2 134040919 134041217 -119215366 + AluSc SINE Alu 1 296 -13 245 217 264 9 chr2 134041222 134041328 -119215255 + L1ME4a LINE L1 5955 6087 -34 675 265 29 0 chr2 134042231 134042401 -119214182 + MER45A DNA AcHobo 1 175 -3 211 289 52 31 chr2 134043713 134043810 -119212773 + L2 LINE L2 3174 3272 0 198 0 0 0 chr2 134044466 134044488 -119212095 + (TG)n Simple_repeat Simple_repeat 1 22 0 429 241 78 14 chr2 134046224 134046365 -119210218 + MIR SINE MIR 65 214 -48 304 216 30 8 chr2 134046377 134046511 -119210072 + (ATG)n Simple_repeat Simple_repeat 2 138 0 603 210 17 0 chr2 134046534 134046710 -119209873 + (ATG)n Simple_repeat Simple_repeat 1 179 0 * 777 182 0 31 chr2 134046674 134047234 -119209349 + (ATGGTG)n Simple_repeat Simple_repeat 1 542 0 667 215 11 0 chr2 134047220 134047397 -119209186 + (ATG)n Simple_repeat Simple_repeat 1 179 0 * 195 204 0 0 chr2 134047419 134047463 -119209120 + (ATGGTG)n Simple_repeat Simple_repeat 4 47 0 208 211 211 74 chr2 134047477 134047572 -119209011 - MIR SINE MIR -147 115 8 202 262 49 0 chr2 134050109 134050170 -119206413 - MIR SINE MIR -96 166 103 282 296 78 39 chr2 134050397 134050576 -119206007 - L2 LINE L2 -45 3268 3083 465 295 125 42 chr2 134052039 134052217 -119204366 - HAL1 LINE L1 -2160 347 185 3229 154 6 14 chr2 134052217 134052737 -119203846 - L1PA15 LINE L1 -6 6159 5644 465 295 125 42 chr2 134052737 134052870 -119203713 - HAL1 LINE L1 -2322 185 10 370 277 18 54 chr2 134054943 134055109 -119201474 + L2 LINE L2 3107 3266 -47 1344 197 60 76 chr2 134055241 134055611 -119200972 - MLT1A1 LTR MaLR -1 364 1 2042 210 4 39 chr2 134056169 134056627 -119199956 - LTR47B LTR ERVL 0 443 2 2413 259 62 37 chr2 134057176 134057254 -119199329 + L1MEc LINE L1 36 111 -6285 2047 104 7 0 chr2 134057254 134057532 -119199051 + AluSq SINE Alu 2 281 -32 315 0 0 0 chr2 134057534 134057569 -119199014 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 2413 259 62 37 chr2 134057569 134057624 -119198959 + L1MEc LINE L1 111 163 -6233 2341 163 72 12 chr2 134057624 134058029 -119198554 + MSTB1 LTR MaLR 4 432 0 2413 259 62 37 chr2 134058029 134058488 -119198095 + L1MEc LINE L1 163 663 -5733 2201 77 6 22 chr2 134058488 134058801 -119197782 + AluY SINE Alu 2 309 -2 2413 259 62 37 chr2 134058801 134059077 -119197506 + L1MEc LINE L1 663 931 -5465 403 204 11 0 chr2 134059078 134059166 -119197417 - MER96 DNA MER1_type? 0 175 87 659 225 8 0 chr2 134059182 134059311 -119197272 + Tigger3(Golem) DNA MER2_type 1 130 -2899 * 4055 110 14 71 chr2 134059310 134060085 -119196498 + Tigger3(Golem) DNA MER2_type 2298 3028 -1 1726 243 40 27 chr2 134060086 134060852 -119195731 + L1MEc LINE L1 2047 2780 -3435 1474 233 97 19 chr2 134061042 134061668 -119194915 + L1MEc LINE L1 2749 3423 -2792 1738 233 40 5 chr2 134061713 134062108 -119194475 + MLT1C LTR MaLR 59 467 0 3766 222 54 79 chr2 134062108 134063614 -119192969 + L1MEc LINE L1 3419 4887 -1328 2049 126 0 20 chr2 134064735 134065029 -119191554 + AluSx SINE Alu 17 304 -8 264 332 192 5 chr2 134065954 134066116 -119190467 - L2 LINE L2 -837 2477 2264 2793 127 57 0 chr2 134066116 134066558 -119190025 - LTR24 LTR ERV1 0 467 1 264 332 192 5 chr2 134066558 134066609 -119189974 - L2 LINE L2 -1050 2264 2224 2864 16 0 3 chr2 134067478 134067790 -119188793 - AluYb8 SINE Alu -7 311 1 1192 205 138 31 chr2 134067866 134068193 -119188390 - MLT1A1 LTR MaLR 0 365 4 269 257 176 74 chr2 134068369 134068517 -119188066 + MER5A DNA MER1_type 18 180 -9 425 244 41 16 chr2 134068687 134068810 -119187773 - MIR SINE MIR -76 186 61 279 268 89 51 chr2 134069128 134069351 -119187232 + L1ME4a LINE L1 5597 5827 -489 2452 77 0 3 chr2 134069351 134069648 -119186935 + AluSq SINE Alu 1 296 -17 279 268 89 51 chr2 134069648 134069669 -119186914 + L1ME4a LINE L1 5827 5846 -470 225 228 192 18 chr2 134070022 134070112 -119186471 + L1ME4a LINE L1 5926 5999 -122 2099 138 3 0 chr2 134070112 134070416 -119186167 - AluSq SINE Alu -2 311 7 225 228 192 18 chr2 134070416 134070492 -119186091 + L1ME4a LINE L1 5999 6121 0 435 252 18 9 chr2 134070804 134070915 -119185668 - MIR3 SINE MIR -16 192 81 284 211 138 41 chr2 134071694 134071817 -119184766 - L1ME LINE L1 -333 5837 5703 291 298 0 0 chr2 134072072 134072176 -119184407 - L1ME LINE L1 -907 5396 5293 2137 131 3 3 chr2 134073109 134073407 -119183176 - AluSx SINE Alu -14 298 1 8057 139 20 1 chr2 134073472 134074747 -119181836 + HSMAR2 DNA Mariner 2 1301 -1 450 309 39 29 chr2 134074937 134075141 -119181442 + L1MC4 LINE L1 7836 8041 -1 375 272 61 110 chr2 134075321 134075795 -119180788 + HAL1b LINE L1 1 451 -897 1871 155 22 0 chr2 134075902 134076224 -119180359 + L1MA9 LINE L1 5465 5793 -519 633 183 0 106 chr2 134076218 134076291 -119180292 + L1MA9 LINE L1 6152 6231 -81 * 2629 52 7 0 chr2 134076291 134076600 -119179983 - AluY SINE Alu 0 311 1 633 183 0 106 chr2 134076600 134076706 -119179877 + L1MA9 LINE L1 6231 6312 0 225 313 18 0 chr2 134077309 134077421 -119179162 - LTR33 LTR ERVL -75 446 333 282 316 7 37 chr2 134077518 134077654 -119178929 - LTR33 LTR ERVL -389 132 1 250 359 36 10 chr2 134077863 134078055 -119178528 - L1ME LINE L1 -1857 4289 4093 714 285 123 83 chr2 134078084 134078348 -119178235 - L1ME LINE L1 -2025 4121 3869 2033 145 0 0 chr2 134078348 134078637 -119177946 - AluJb SINE Alu -23 289 1 714 285 123 83 chr2 134078637 134078951 -119177632 - L1ME LINE L1 -2277 3869 3520 403 308 128 38 chr2 134078957 134079168 -119177415 + L1M4 LINE L1 4168 4397 -1749 34 24 0 0 chr2 134079343 134079384 -119177199 + AT_rich Low_complexity Low_complexity 1 41 0 1873 139 4 0 chr2 134079385 134079644 -119176939 - AluSx SINE Alu -15 297 38 416 230 52 7 chr2 134079775 134079910 -119176673 - Charlie7 DNA MER1_type -2152 460 320 317 267 44 22 chr2 134080302 134080392 -119176191 - MLT2E LTR ERVL -497 131 40 563 273 129 14 chr2 134080817 134081026 -119175557 - ERVL LTR ERVL -432 5332 5100 381 316 57 8 chr2 134081263 134081507 -119175076 - ERVL LTR ERVL -893 4761 4506 2361 96 0 25 chr2 134081606 134081920 -119174663 + AluSx SINE Alu 1 306 -6 702 311 62 39 chr2 134082993 134083607 -119172976 - L1MC4a LINE L1 -1895 5913 5286 743 345 70 40 chr2 134083747 134084317 -119172266 - L1MC4a LINE L1 -1029 5117 4524 2440 81 3 0 chr2 134084317 134084614 -119171969 + AluSp SINE Alu 1 298 -15 743 345 70 40 chr2 134084614 134084686 -119171897 - L1MC4a LINE L1 -1622 4524 4456 631 298 254 12 chr2 134084773 134085238 -119171345 - L2 LINE L2 -84 3229 2655 210 313 169 58 chr2 134085241 134085589 -119170994 + L2 LINE L2 1073 1459 -1855 570 252 142 43 chr2 134085592 134085917 -119170666 + L2 LINE L2 2291 2647 -667 737 285 123 25 chr2 134085939 134086400 -119170183 + L2 LINE L2 2753 3307 -6 239 297 0 0 chr2 134087675 134087739 -119168844 + L1ME4a LINE L1 5537 5600 -521 635 252 214 24 chr2 134087824 134088165 -119168418 + L1ME4a LINE L1 5714 6119 -2 428 264 25 9 chr2 134088527 134088735 -119167848 + MIR SINE MIR 5 262 0 267 362 36 22 chr2 134088874 134089012 -119167571 + MER5A DNA MER1_type 24 163 -26 2149 161 31 3 chr2 134089037 134089392 -119167191 - MLT1A1 LTR MaLR 0 365 1 378 297 10 82 chr2 134090056 134090251 -119166332 - L2 LINE L2 -193 3079 2899 264 172 293 20 chr2 134090424 134090523 -119166060 + LTR16A LTR ERVL 322 447 -3 207 292 115 18 chr2 134090810 134090923 -119165660 - MIR SINE MIR -133 129 6 472 212 212 45 chr2 134090997 134091219 -119165364 + MLT1D LTR MaLR 66 324 -181 183 269 115 13 chr2 134091977 134092055 -119164528 + L3 LINE CR1 1308 1393 -184 231 178 82 27 chr2 134092116 134092189 -119164394 - MIR SINE MIR -96 166 90 218 238 200 0 chr2 134092571 134092651 -119163932 - MIR SINE MIR -67 141 46 215 188 12 100 chr2 134093152 134093232 -119163351 - MER5A DNA MER1_type -36 153 81 520 206 19 0 chr2 134094896 134095003 -119161580 + MER67B LTR ERV1 552 660 -1 253 188 0 62 chr2 134095377 134095441 -119161142 + G-rich Low_complexity Low_complexity 4 63 0 185 238 0 0 chr2 134096209 134096251 -119160332 - MIR SINE MIR 0 262 221 225 256 12 37 chr2 134096330 134096412 -119160171 - MIR SINE MIR -124 138 59 184 162 27 0 chr2 134096509 134096546 -119160037 - MIR SINE MIR -117 145 108 325 312 39 0 chr2 134098081 134098158 -119158425 + L2 LINE L2 3151 3230 -42 384 200 0 0 chr2 134098185 134098265 -119158318 + (TGGG)n Simple_repeat Simple_repeat 3 82 0 826 177 14 0 chr2 134098288 134098792 -119157791 + (TGGA)n Simple_repeat Simple_repeat 1 511 0 207 250 23 0 chr2 134098792 134098836 -119157747 + (TGGG)n Simple_repeat Simple_repeat 4 48 0 720 194 20 0 chr2 134098837 134099193 -119157390 + (TGGA)n Simple_repeat Simple_repeat 1 363 0 280 328 127 57 chr2 134099493 134099880 -119156703 - L3 LINE CR1 -838 739 326 201 120 160 20 chr2 134100171 134100221 -119156362 + MIR SINE MIR 127 183 -79 618 259 119 84 chr2 134100630 134101093 -119155490 + HAL1 LINE L1 1 479 -2028 243 250 15 15 chr2 134101164 134101232 -119155351 + HAL1 LINE L1 589 656 -1851 511 254 46 29 chr2 134101394 134101674 -119154909 + HAL1 LINE L1 901 1185 -1322 261 307 125 18 chr2 134101888 134102168 -119154415 + LTR16A1 LTR ERVL 148 457 0 1366 259 96 20 chr2 134102174 134102787 -119153796 + HAL1 LINE L1 1221 1880 -627 596 269 158 39 chr2 134102842 134103310 -119153273 + HAL1 LINE L1 1664 2187 -320 960 132 13 6 chr2 134103310 134103469 -119153114 - Tigger7 DNA MER2_type -1 2486 2327 2334 102 3 3 chr2 134103500 134103804 -119152779 + AluSx SINE Alu 1 304 -8 1533 156 87 139 chr2 134103810 134104271 -119152312 - LTR23 LTR ERV1 0 437 1 984 117 0 0 chr2 134104320 134104448 -119152135 + AluSc SINE Alu 3 130 -179 1343 109 0 0 chr2 134104501 134104675 -119151908 + AluSc SINE Alu 115 288 -21 1853 111 12 0 chr2 134105682 134105934 -119150649 - AluSx SINE Alu -18 294 40 265 204 19 0 chr2 134106116 134106170 -119150413 - LTR49-int LTR ERV1 -1847 4484 4430 * 1731 196 55 111 chr2 134106162 134106490 -119150093 - LTR49-int LTR ERV1 -2401 3930 3660 2358 107 0 0 chr2 134106490 134106798 -119149785 - AluSc SINE Alu -1 308 1 1731 196 55 111 chr2 134106798 134107175 -119149408 - LTR49-int LTR ERV1 -2671 3660 3264 8058 171 23 46 chr2 134107227 134108723 -119147860 - LTR49-int LTR ERV1 -3059 3272 1819 2075 104 0 0 chr2 134108723 134108991 -119147592 + AluSq SINE Alu 39 306 -7 8058 171 23 46 chr2 134108991 134109249 -119147334 - LTR49-int LTR ERV1 -4512 1819 1557 1575 143 0 9 chr2 134109603 134109834 -119146749 - AluSc SINE Alu -10 299 71 1239 132 120 23 chr2 134110535 134110793 -119145790 - LTR23 LTR ERV1 0 437 155 453 210 43 80 chr2 134110869 134110969 -119145614 - LTR23 LTR ERV1 -294 143 48 2511 79 0 0 chr2 134110969 134111273 -119145310 - AluSx SINE Alu -7 305 2 453 210 43 80 chr2 134111273 134111310 -119145273 - LTR23 LTR ERV1 -389 48 11 1039 142 15 41 chr2 134111314 134111511 -119145072 - Tigger7 DNA MER2_type -153 2434 2243 * 1123 188 145 4 chr2 134111509 134111743 -119144840 + Tigger7 DNA MER2_type 76 342 -2145 293 227 13 13 chr2 134111749 134111824 -119144759 - Tigger7 DNA MER2_type -629 76 2 272 242 33 99 chr2 134111828 134112039 -119144544 + HAL1 LINE L1 2198 2394 -113 281 209 11 77 chr2 134112054 134112075 -119144508 - L1MA10 LINE L1 -69 6265 5673 2923 135 82 42 chr2 134112075 134112647 -119143936 - LTR49 LTR ERV1 0 595 1 624 223 40 36 chr2 134112648 134112872 -119143711 - L1ME2 LINE L1 -80 6084 5860 * 4232 174 16 39 chr2 134112871 134113242 -119143341 - L1MA9 LINE L1 -138 6174 5796 303 28 0 0 chr2 134113242 134113278 -119143305 + (TG)n Simple_repeat Simple_repeat 1 36 0 4232 174 16 39 chr2 134113278 134113777 -119142806 - L1MA9 LINE L1 -516 5796 5287 1852 118 94 14 chr2 134113777 134114065 -119142518 - AluSx SINE Alu 0 312 2 4232 174 16 39 chr2 134114065 134114793 -119141790 - L1MA9 LINE L1 -1025 5287 4610 530 217 28 42 chr2 134114909 134115052 -119141531 + MIR SINE MIR 9 149 -113 2465 94 10 0 chr2 134115811 134116120 -119140463 - AluSp SINE Alu -1 312 1 294 319 126 0 chr2 134117011 134117146 -119139437 + MIR3 SINE MIR 30 181 -27 392 268 49 0 chr2 134117155 134117278 -119139305 - LTR16C LTR ERVL 0 491 363 791 230 36 10 chr2 134117303 134117499 -119139084 - MER63A DNA MER1_type -3 207 7 618 299 56 13 chr2 134117482 134117713 -119138870 - LTR16C LTR ERVL -150 341 101 * 2497 69 0 0 chr2 134117952 134117965 -119138618 - AluY SINE Alu -8 303 291 348 24 0 0 chr2 134117965 134118006 -119138577 + (TG)n Simple_repeat Simple_repeat 2 42 0 2497 69 0 0 chr2 134118006 134118295 -119138288 - AluY SINE Alu -19 292 1 180 219 156 0 chr2 134119287 134119415 -119137168 - L2 LINE L2 -345 2969 2822 1892 157 3 7 chr2 134120255 134120549 -119136034 - AluJo SINE Alu -19 293 1 975 269 73 98 chr2 134120556 134120777 -119135806 + HAL1 LINE L1 1406 1631 -876 2086 165 23 16 chr2 134120777 134121164 -119135419 - MLT1B LTR MaLR 0 390 1 975 269 73 98 chr2 134121164 134121644 -119134939 + HAL1 LINE L1 1631 2089 -418 318 257 193 57 chr2 134121644 134121784 -119134799 + HAL1 LINE L1 2021 2179 -328 360 314 106 32 chr2 134122186 134122498 -119134085 + HAL1 LINE L1 2167 2501 -6 959 271 110 32 chr2 134122898 134123396 -119133187 + L1M1 LINE L1 5270 5812 -421 295 234 117 25 chr2 134125816 134126013 -119130570 - L2 LINE L2 -265 3048 2834 1010 201 25 4 chr2 134126196 134126445 -119130138 - MLT1B LTR MaLR -57 410 79 183 306 14 14 chr2 134127585 134127657 -119128926 - MIR3 SINE MIR -38 170 99 24 0 0 0 chr2 134127826 134127850 -119128733 + AT_rich Low_complexity Low_complexity 1 24 0 528 92 10 41 chr2 134128422 134128520 -119128063 - MLT1B LTR MaLR -295 95 1 216 298 0 0 chr2 134128522 134128606 -119127977 - L2 LINE L2 -689 2625 2542 1891 240 73 65 chr2 134128615 134129086 -119127497 + MER97a DNA MER1_type? 8 474 -420 1313 161 187 22 chr2 134129086 134129353 -119127230 + AluJo SINE Alu 1 311 -1 1891 240 73 65 chr2 134129353 134129548 -119127035 + MER97a DNA MER1_type? 474 666 -228 2503 61 7 0 chr2 134129548 134129845 -119126738 + AluSq SINE Alu 2 300 -13 1891 240 73 65 chr2 134129845 134129987 -119126596 + MER97a DNA MER1_type? 666 805 -89 885 232 123 24 chr2 134129987 134130319 -119126264 - MLT1A1 LTR MaLR 0 365 1 1891 240 73 65 chr2 134130319 134130346 -119126237 + MER97a DNA MER1_type? 805 830 -64 2136 117 7 0 chr2 134130346 134130644 -119125939 + AluSg SINE Alu 1 300 -10 1891 240 73 65 chr2 134130644 134130685 -119125898 + MER97a DNA MER1_type? 830 894 0 352 354 4 39 chr2 134130764 134130993 -119125590 - L2 LINE L2 -905 2409 2189 286 285 227 17 chr2 134131236 134131408 -119125175 - L2 LINE L2 -558 2756 2549 321 259 42 70 chr2 134131626 134131769 -119124814 - L2 LINE L2 -2 3311 3173 * 706 310 25 7 chr2 134131758 134132032 -119124551 - L2 LINE L2 -741 2573 2295 2179 159 34 5 chr2 134133732 134134148 -119122435 + MSTA LTR MaLR 1 428 0 359 278 83 0 chr2 134134518 134134651 -119121932 - L2 LINE L2 -1568 1746 1603 1251 193 0 10 chr2 134134986 134135193 -119121390 + AluJo SINE Alu 1 205 -107 505 317 57 27 chr2 134135248 134135614 -119120969 + L1M4 LINE L1 3526 3902 -2244 1368 115 0 0 chr2 134135615 134135789 -119120794 + AluSq SINE Alu 1 174 -139 25 0 0 0 chr2 134135791 134135816 -119120767 + AT_rich Low_complexity Low_complexity 1 25 0 502 258 91 133 chr2 134135839 134136784 -119119799 + L1M4 LINE L1 3943 4847 -1299 410 202 101 34 chr2 134136827 134136946 -119119637 + FLAM_C SINE Alu 7 133 0 500 304 51 47 chr2 134136966 134137208 -119119375 + L1M4 LINE L1 4909 5155 -991 2002 117 28 3 chr2 134137208 134137520 -119119063 - AluSx SINE Alu 0 312 7 500 304 51 47 chr2 134137520 134137727 -119118856 + L1M4 LINE L1 5155 5360 -786 1556 263 115 17 chr2 134138242 134139136 -119117447 + L2 LINE L2 2294 3273 -40 247 252 78 10 chr2 134140338 134140441 -119116142 - MIR SINE MIR -69 139 30 389 258 97 24 chr2 134142175 134142299 -119114284 + MIR SINE MIR 14 146 -116 432 271 51 0 chr2 134143872 134143990 -119112593 + MER63 DNA MER1_type 1 750 -312 2204 128 0 16 chr2 134144647 134144953 -119111630 + AluSx SINE Alu 5 305 -7 201 250 19 0 chr2 134145210 134145262 -119111321 + MIR SINE MIR 96 148 -114 712 260 126 54 chr2 134146261 134146634 -119109949 + MLT1I LTR MaLR 8 407 -2 1387 228 133 36 chr2 134149019 134149493 -119107090 - MLT2B1 LTR ERVL 0 520 1 1527 153 107 3 chr2 134149638 134149832 -119106751 + MER46B DNA MER2_type 1 119 -2612 2431 93 3 0 chr2 134149832 134150133 -119106450 + AluSp SINE Alu 1 302 -11 1527 153 107 3 chr2 134150133 134150265 -119106318 + MER46B DNA MER2_type 119 236 0 243 213 0 0 chr2 134151187 134151234 -119105349 - MIR SINE MIR -108 154 108 331 255 160 0 chr2 134151298 134151404 -119105179 + MIR SINE MIR 32 154 -108 284 269 100 8 chr2 134151548 134151678 -119104905 - MIR SINE MIR -91 171 30 216 208 0 42 chr2 134152762 134152834 -119103749 + GA-rich Low_complexity Low_complexity 1 69 0 1308 227 55 2 chr2 134152872 134153220 -119103363 - MLT1A2 LTR MaLR 0 467 6 344 358 40 0 chr2 134154499 134154672 -119101911 - MIR SINE MIR 0 262 83 207 291 121 44 chr2 134154701 134154907 -119101676 - L2 LINE L2 -883 2431 2210 1169 189 64 73 chr2 134155247 134155701 -119100882 - LTR7 LTR ERV1 0 450 1 194 208 156 0 chr2 134156057 134156134 -119100449 - L2 LINE L2 -1342 1972 1884 291 301 130 55 chr2 134156563 134157028 -119099555 - L1MC4a LINE L1 -1850 5958 5434 642 147 16 16 chr2 134157028 134157157 -119099426 + L1MC1 LINE L1 6204 6332 -1 291 301 130 55 chr2 134157157 134157306 -119099277 - L1MC4a LINE L1 -2374 5434 5298 786 222 58 113 chr2 134157873 134158184 -119098399 + MLT1J LTR MaLR 1 294 -156 894 254 12 44 chr2 134158211 134158463 -119098120 - MIR SINE MIR -11 251 8 227 319 168 0 chr2 134158497 134158616 -119097967 - L2 LINE L2 -82 3231 3093 198 274 59 20 chr2 134158673 134158775 -119097808 + MIR SINE MIR 32 137 -125 186 333 0 0 chr2 134158962 134159025 -119097558 - MIR SINE MIR -83 179 117 247 223 85 43 chr2 134159703 134159797 -119096786 - MIR SINE MIR -80 182 85 1180 240 38 0 chr2 134159840 134160132 -119096451 - MER63 DNA MER1_type -74 986 684 1022 82 0 0 chr2 134160191 134160313 -119096270 + AluSg SINE Alu 1 122 -188 587 228 43 25 chr2 134160335 134160497 -119096086 - MER63 DNA MER1_type -438 622 458 2100 108 0 4 chr2 134160795 134161063 -119095520 + AluSx SINE Alu 1 267 -45 353 109 36 0 chr2 134161063 134161118 -119095465 + Alu SINE Alu 235 291 -10 2236 197 69 17 chr2 134161136 134161670 -119094913 - L1MB8 LINE L1 -1 6246 5685 8258 223 73 39 chr2 134161674 134163103 -119093480 - L1MB8 LINE L1 -707 5536 4157 2435 84 3 0 chr2 134163103 134163401 -119093182 + AluSp SINE Alu 1 299 -14 8258 223 73 39 chr2 134163401 134163988 -119092595 - L1MB8 LINE L1 -2086 4157 3591 297 0 0 0 chr2 134163988 134164021 -119092562 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 2060 125 7 0 chr2 134164023 134164304 -119092279 - AluSx SINE Alu -29 283 1 8258 223 73 39 chr2 134164304 134165865 -119090718 - L1MB8 LINE L1 -2652 3591 1874 384 296 77 44 chr2 134165906 134166139 -119090444 - L1MCa LINE L1 -4389 2037 1835 357 292 199 0 chr2 134166324 134166495 -119090088 - MIR SINE MIR -18 244 40 2016 133 11 0 chr2 134166901 134167204 -119089379 + AluSx SINE Alu 1 306 0 333 203 41 49 chr2 134167364 134167487 -119089096 - L1ME4a LINE L1 -212 5909 5788 290 313 85 45 chr2 134169312 134169488 -119087095 - MIR SINE MIR -67 195 13 1346 164 14 8 chr2 134170622 134171013 -119085570 + LTR47B LTR ERVL 1 443 0 225 0 0 0 chr2 134172520 134172545 -119084038 + (CCCCCA)n Simple_repeat Simple_repeat 4 28 0 229 196 22 0 chr2 134172556 134172602 -119083981 + GA-rich Low_complexity Low_complexity 1 47 0 2115 102 35 0 chr2 134172915 134173199 -119083384 + AluSg SINE Alu 3 296 -14 306 309 54 93 chr2 134173230 134173434 -119083149 - L2 LINE L2 -127 3145 2950 185 255 39 20 chr2 134175243 134175294 -119081289 + MIR3 SINE MIR 143 194 -14 311 277 143 16 chr2 134176399 134176587 -119079996 - MIR SINE MIR -38 224 14 1612 148 91 55 chr2 134177410 134177774 -119078809 - LTR8A LTR ERV1 0 727 351 3015 206 57 48 chr2 134177798 134178654 -119077929 + MER52A LTR ERV1 8 956 -364 * 3459 199 7 5 chr2 134178647 134179249 -119077334 + MER52A LTR ERV1 1153 1755 0 1186 148 138 122 chr2 134179249 134179592 -119076991 - LTR8A LTR ERV1 -378 349 1 3554 223 85 19 chr2 134181233 134182309 -119074274 - L1M4 LINE L1 -1379 5003 3857 359 143 0 0 chr2 134182309 134182365 -119074218 + MLT1B LTR MaLR 1 56 -334 201 39 0 0 chr2 134182366 134182392 -119074191 + (TC)n Simple_repeat Simple_repeat 1 26 0 776 242 74 5 chr2 134182412 134182602 -119073981 + MLT1B LTR MaLR 188 390 0 2904 237 30 24 chr2 134182603 134182710 -119073873 - L1M4 LINE L1 -2522 3860 3755 1822 80 30 0 chr2 134182710 134182973 -119073610 - L1PA14 LINE L1 -1 6160 5890 2048 156 0 0 chr2 134182983 134183284 -119073299 - AluJb SINE Alu -11 301 1 2904 237 30 24 chr2 134183284 134184130 -119072453 - L1M4 LINE L1 -2635 3747 2890 2239 104 3 7 chr2 134184130 134184429 -119072154 - AluSg SINE Alu -2 308 11 735 195 36 196 chr2 134184429 134184723 -119071860 - L1M4 LINE L1 -3862 2520 2279 255 261 171 45 chr2 134184723 134184834 -119071749 - FLAM_C SINE Alu 0 133 9 735 195 36 196 chr2 134184834 134185146 -119071437 - L1M4 LINE L1 -4103 2279 1919 249 33 0 0 chr2 134185179 134185209 -119071374 + (T)n Simple_repeat Simple_repeat 1 30 0 678 283 69 24 chr2 134185227 134185517 -119071066 - L1M4 LINE L1 -6052 332 30 201 39 0 0 chr2 134185819 134185845 -119070738 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 1967 146 4 4 chr2 134185850 134186130 -119070453 - AluSq SINE Alu -33 280 1 432 303 63 63 chr2 134186390 134186947 -119069636 - L1M4 LINE L1 -2904 3242 2686 316 311 67 0 chr2 134187447 134187602 -119068981 + L1ME LINE L1 5676 5844 -326 1479 184 23 54 chr2 134187660 134188046 -119068537 - MLT1A2 LTR MaLR 0 374 1 2215 107 0 3 chr2 134188640 134188930 -119067653 - AluSc SINE Alu -20 289 1 2862 141 11 7 chr2 134189124 134189579 -119067004 - LTR32 LTR ERVL 0 471 15 299 318 70 28 chr2 134189916 134190051 -119066532 + LTR33 LTR ERVL 99 248 -273 2056 143 72 6 chr2 134190051 134190386 -119066197 - LTR18A LTR ERVL 0 357 1 299 318 70 28 chr2 134190386 134190464 -119066119 + LTR33 LTR ERVL 248 321 -200 254 250 39 23 chr2 134190466 134190594 -119065989 + LTR33 LTR ERVL 382 511 -10 1984 217 42 74 chr2 134190674 134191296 -119065287 - MER77 LTR ERV1 0 605 4 285 257 14 0 chr2 134191427 134191571 -119065012 + CT-rich Low_complexity Low_complexity 1 146 0 1654 224 72 57 chr2 134191688 134192478 -119064105 - MER21B LTR ERV1 -4 859 1 311 336 32 0 chr2 134194463 134194588 -119061995 + MIR SINE MIR 89 217 -45 182 314 57 0 chr2 134195086 134195156 -119061427 + MIR SINE MIR 118 191 -71 247 254 87 61 chr2 134196061 134196224 -119060359 - MIR SINE MIR -63 145 18 280 310 10 10 chr2 134196947 134197047 -119059536 - L2 LINE L2 -41 3272 3173 294 295 116 0 chr2 134197287 134197399 -119059184 - MIR SINE MIR -113 149 25 186 281 31 0 chr2 134199059 134199123 -119057460 - MIR SINE MIR -150 112 47 270 315 28 0 chr2 134199152 134199259 -119057324 + MIR SINE MIR 33 145 -63 2257 109 3 7 chr2 134199267 134199571 -119057012 + AluSx SINE Alu 1 303 -9 305 271 114 36 chr2 134199922 134200088 -119056495 + MIR3 SINE MIR 4 182 -26 826 123 0 0 chr2 134200215 134200329 -119056254 + 5S rRNA rRNA 8 121 0 326 341 61 40 chr2 134200386 134200682 -119055901 - MLT1I LTR MaLR -106 303 2 3862 82 30 0 chr2 134201591 134202128 -119054455 + MER41A LTR ERV1 2 554 0 357 307 56 22 chr2 134202712 134202982 -119053601 - L1ME4a LINE L1 -116 6005 5727 1084 219 107 39 chr2 134205491 134205856 -119050727 - MLT1B LTR MaLR 0 378 1 813 266 109 29 chr2 134206333 134206682 -119049901 - MLT1H1 LTR MaLR -2 553 177 211 271 14 0 chr2 134206873 134206943 -119049640 + (CA)n Simple_repeat Simple_repeat 1 71 0 275 263 21 0 chr2 134206987 134207082 -119049501 + (CA)n Simple_repeat Simple_repeat 1 97 0 425 264 55 25 chr2 134207365 134207528 -119049055 + Charlie8 DNA MER1_type 1 168 -2249 2353 92 20 0 chr2 134207532 134207837 -119048746 + AluSp SINE Alu 1 311 -2 180 209 15 164 chr2 134209782 134209849 -119046734 - MIR3 SINE MIR -27 181 125 891 242 178 50 chr2 134209855 134210361 -119046222 - MER39 LTR ERV1 0 707 1 3221 217 107 42 chr2 134210554 134211618 -119044965 + L1MD2 LINE L1 34 1028 -5378 1839 161 7 7 chr2 134211618 134211916 -119044667 + AluJb SINE Alu 1 298 -14 3221 217 107 42 chr2 134211916 134211927 -119044656 + L1MD2 LINE L1 1028 1037 -5369 2245 110 0 0 chr2 134211927 134212218 -119044365 + AluSg SINE Alu 2 292 -18 2187 112 3 0 chr2 134212219 134212504 -119044079 + AluSx SINE Alu 15 300 -12 3221 217 107 42 chr2 134212504 134213322 -119043261 + L1MD2 LINE L1 1036 2037 -4369 7133 222 71 22 chr2 134213329 134217420 -119039163 + L1MD2 LINE L1 2078 6370 -249 195 162 0 0 chr2 134217540 134217577 -119039006 + (CA)n Simple_repeat Simple_repeat 2 38 0 1617 209 116 14 chr2 134217579 134218062 -119038521 + LTR55 LTR ERV 2 533 -15 270 0 0 0 chr2 134218071 134218101 -119038482 + (CA)n Simple_repeat Simple_repeat 1 30 0 760 205 47 5 chr2 134218102 134218292 -119038291 + L1MD2 LINE L1 6421 6618 -1 456 192 0 0 chr2 134218430 134218529 -119038054 + (CA)n Simple_repeat Simple_repeat 1 99 0 222 324 115 20 chr2 134218606 134218754 -119037829 + MIR SINE MIR 48 209 -53 219 260 60 0 chr2 134218744 134218794 -119037789 - MIR SINE MIR -93 169 117 * 354 206 103 9 chr2 134219906 134220013 -119036570 + L1MB1 LINE L1 5893 6009 -159 25 31 0 0 chr2 134220125 134220157 -119036426 + AT_rich Low_complexity Low_complexity 1 32 0 213 368 0 0 chr2 134220760 134220828 -119035755 + MIR SINE MIR 81 148 -114 359 272 40 8 chr2 134221224 134221349 -119035234 - MER117 DNA MER1_type -38 159 31 244 293 179 8 chr2 134221556 134221679 -119034904 + MLT1E2 LTR MaLR 1 144 -510 1446 239 63 38 chr2 134221680 134221736 -119034847 + MLT1E2 LTR MaLR 108 161 -465 2141 119 17 0 chr2 134221736 134222029 -119034554 - AluSg SINE Alu -12 298 1 1446 239 63 38 chr2 134222029 134222478 -119034105 + MLT1E2 LTR MaLR 161 626 0 3459 173 130 30 chr2 134222698 134223551 -119033032 + LTR28 LTR ERV1 7 1018 -2 217 321 57 0 chr2 134223836 134223942 -119032641 + L2 LINE L2 3184 3295 -18 372 236 35 92 chr2 134224130 134224304 -119032279 + HAL1 LINE L1 47 210 -2297 292 284 84 0 chr2 134224418 134224513 -119032070 + MER94 DNA DNA 7 109 -25 1694 214 16 23 chr2 134224543 134224927 -119031656 - MSTD LTR MaLR 0 396 16 390 263 0 11 chr2 134225230 134225325 -119031258 + HAL1 LINE L1 807 900 -1607 738 253 110 54 chr2 134225358 134225931 -119030652 + HAL1 LINE L1 995 1599 -908 530 83 21 10 chr2 134225991 134226087 -119030496 + SVA Other Other 770 866 -520 1313 145 19 63 chr2 134226104 134226532 -119030051 + SVA Other Other 433 841 -545 594 86 31 86 chr2 134226543 134226706 -119029877 + SVA Other Other 641 794 -592 6450 72 18 30 chr2 134226722 134227665 -119028918 + SVA Other Other 476 1407 0 2297 112 3 0 chr2 134227676 134227979 -119028604 + AluSx SINE Alu 1 304 -8 365 286 158 5 chr2 134228730 134228933 -119027650 + LTR16A1 LTR ERVL 199 432 -25 880 263 208 29 chr2 134228935 134229552 -119027031 + HAL1 LINE L1 1630 2356 -151 237 139 0 0 chr2 134229935 134229978 -119026605 + (TATG)n Simple_repeat Simple_repeat 2 44 0 1454 159 7 59 chr2 134229980 134230251 -119026332 - AluJb SINE Alu -30 282 26 1079 257 32 59 chr2 134230453 134230892 -119025691 + MLT1H LTR MaLR 123 549 0 262 312 19 64 chr2 134231833 134231990 -119024593 - MIR3 SINE MIR -6 202 53 2141 109 3 38 chr2 134233047 134233367 -119023216 + AluSg SINE Alu 1 309 -1 216 313 30 0 chr2 134233713 134233780 -119022803 + L2 LINE L2 3235 3303 -10 213 323 271 0 chr2 134234225 134234358 -119022225 - MIR SINE MIR -11 251 83 279 229 29 0 chr2 134234868 134234938 -119021645 + LTR16C LTR ERVL 420 491 0 1430 239 46 42 chr2 134235392 134235559 -119021024 + L1ME3A LINE L1 5684 5849 -321 2520 69 0 3 chr2 134235559 134235864 -119020719 + AluY SINE Alu 1 304 -7 1430 239 46 42 chr2 134235864 134236173 -119020410 + L1ME3A LINE L1 5849 6162 -8 556 254 146 10 chr2 134236168 134236373 -119020210 + HAL1 LINE L1 79 311 -2196 * 837 211 243 32 chr2 134236429 134236803 -119019780 + HAL1 LINE L1 1428 1880 -627 449 275 100 28 chr2 134236869 134237001 -119019582 + L1MC4 LINE L1 6277 6398 -1495 1736 177 51 49 chr2 134237001 134237390 -119019193 - MLT1B LTR MaLR 0 390 1 449 275 100 28 chr2 134237390 134237662 -119018921 + L1MC4 LINE L1 6398 6802 -1091 7191 137 49 1 chr2 134237793 134239184 -119017399 - L1P4 LINE L1 -673 5488 4052 342 343 111 52 chr2 134239184 134239607 -119016976 + L1MC5 LINE L1 3197 3644 -2502 238 293 0 0 chr2 134239653 134239711 -119016872 + L1P LINE L1 3717 3774 -2372 1508 145 45 75 chr2 134239926 134240284 -119016299 - LTR42 LTR ERVL -148 347 1 1086 317 162 29 chr2 134240312 134241338 -119015245 + L1MC5 LINE L1 4067 5228 -918 549 289 95 34 chr2 134241372 134241729 -119014854 + L1MC5 LINE L1 5267 5645 -2163 258 32 0 0 chr2 134242021 134242052 -119014531 + (TG)n Simple_repeat Simple_repeat 1 31 0 383 319 20 25 chr2 134242928 134243099 -119013484 - MIR SINE MIR -63 145 18 527 249 88 73 chr2 134243297 134243614 -119012969 + L1MC5 LINE L1 6898 7219 -742 456 299 36 15 chr2 134243754 134243891 -119012692 - MER5B DNA MER1_type -35 143 4 599 181 28 2 chr2 134243971 134244115 -119012468 - MER5A DNA MER1_type 0 189 7 779 234 35 0 chr2 134244131 134244302 -119012281 - MER5B DNA MER1_type -1 177 1 672 294 59 36 chr2 134244302 134244745 -119011838 + L1MC5 LINE L1 7330 7782 -179 322 162 29 44 chr2 134244766 134244834 -119011749 + L1MC5 LINE L1 7869 7935 -26 853 291 29 11 chr2 134244936 134245287 -119011296 + HAL1 LINE L1 2005 2361 -146 214 264 47 75 chr2 134245937 134246043 -119010540 + L3 LINE CR1 1415 1517 -60 656 304 152 19 chr2 134246807 134247228 -119009355 - L2 LINE L2 -10 3303 2827 759 300 119 54 chr2 134247268 134247864 -119008719 - L2 LINE L2 -633 2681 2047 1148 231 117 67 chr2 134249185 134249691 -119006892 - MER65B LTR ERV1 0 531 1 318 287 117 74 chr2 134249696 134250226 -119006357 + L1MEd LINE L1 589 1141 -4978 727 344 106 25 chr2 134250239 134250721 -119005862 + L1MEd LINE L1 1169 1689 -4440 447 332 49 57 chr2 134250989 134251254 -119005329 + L1MEd LINE L1 2294 2556 -3573 385 327 40 27 chr2 134251272 134251422 -119005161 - MIR SINE MIR -102 160 9 686 273 136 53 chr2 134251502 134251957 -119004626 - L2 LINE L2 0 3313 2821 1956 201 8 6 chr2 134252202 134252566 -119004017 - MLT1A1 LTR MaLR 0 365 1 2218 71 4 0 chr2 134253058 134253326 -119003257 - AluY SINE Alu -15 296 28 255 233 123 0 chr2 134254413 134254486 -119002097 + MER103 DNA DNA 47 128 -38 238 333 113 34 chr2 134254808 134254985 -119001598 + MIR SINE MIR 17 207 -55 24 53 0 0 chr2 134258515 134258553 -118998030 + GC_rich Low_complexity Low_complexity 1 38 0 269 223 142 19 chr2 134259736 134259876 -118996707 + MIR SINE MIR 93 256 -6 2273 172 65 5 chr2 134260947 134261349 -118995234 - MSTB LTR MaLR 0 426 1 193 357 48 32 chr2 134261417 134261543 -118995040 + MIR SINE MIR 20 147 -115 273 267 76 8 chr2 134262149 134262280 -118994303 + HAL1 LINE L1 947 1086 -1421 23 0 0 0 chr2 134262383 134262406 -118994177 + AT_rich Low_complexity Low_complexity 1 23 0 299 286 134 47 chr2 134262520 134262796 -118993787 + HAL1 LINE L1 1370 1669 -838 361 279 113 53 chr2 134263060 134263080 -118993503 + L1M4c LINE L1 2193 2210 -4172 1876 134 22 26 chr2 134263080 134263393 -118993190 + AluSx SINE Alu 1 312 0 361 279 113 53 chr2 134263393 134263508 -118993075 + L1M4c LINE L1 2210 2317 -4065 2324 100 7 13 chr2 134263508 134263817 -118992766 + AluSx SINE Alu 1 307 -5 361 279 113 53 chr2 134263817 134264036 -118992547 + L1M4c LINE L1 2317 2600 -3782 690 245 88 68 chr2 134264590 134264929 -118991654 + L1M4c LINE L1 3096 3441 -2941 3841 90 0 4 chr2 134264935 134265455 -118991128 - L1PA12 LINE L1 -1 6167 5650 369 0 0 0 chr2 134315541 134315582 -118941001 + (TG)n Simple_repeat Simple_repeat 2 42 0 2118 123 0 0 chr2 134315582 134315890 -118940693 - AluSg SINE Alu -2 308 1 190 318 0 15 chr2 134316595 134316661 -118939922 - L2 LINE L2 -1 3271 3207 2451 69 0 0 chr2 134316759 134317065 -118939518 + AluY SINE Alu 1 311 0 1633 240 81 36 chr2 134317485 134318089 -118938494 + L1MD2 LINE L1 1 576 -5964 2358 84 3 3 chr2 134318089 134318385 -118938198 + AluSc SINE Alu 1 296 -13 1633 240 81 36 chr2 134318385 134318516 -118938067 + L1MD2 LINE L1 576 1174 -5366 744 79 0 0 chr2 134318516 134318617 -118937966 - AluY SINE Alu -6 305 205 1417 109 5 5 chr2 134318617 134318838 -118937745 - pTR5 LTR ERV1 -2046 392 172 369 229 10 0 chr2 134318841 134318937 -118937646 - LTR30 LTR ERV1 -80 642 546 5656 118 51 63 chr2 134318939 134320103 -118936480 - pTR5 LTR ERV1 -413 2025 743 1651 82 0 0 chr2 134320103 134320309 -118936274 - AluY SINE Alu -103 208 3 7253 223 58 33 chr2 134320310 134322935 -118933648 + L1MD2 LINE L1 1167 3724 -2816 2000 159 3 0 chr2 134322935 134323237 -118933346 - AluSx SINE Alu -9 303 1 7253 223 58 33 chr2 134323237 134323720 -118932863 + L1MD2 LINE L1 3724 4193 -2347 2207 107 4 0 chr2 134323720 134324026 -118932557 + AluSx SINE Alu 1 307 0 7253 223 58 33 chr2 134324026 134324377 -118932206 + L1MD2 LINE L1 4193 4534 -2006 1951 140 0 0 chr2 134324377 134324649 -118931934 + AluSg SINE Alu 1 272 -38 437 0 19 0 chr2 134324658 134324711 -118931872 + (CA)n Simple_repeat Simple_repeat 1 54 0 7253 223 58 33 chr2 134324711 134325229 -118931354 + L1MD2 LINE L1 4541 5254 -1286 1112 225 18 33 chr2 134325249 134325524 -118931059 - L1ME1 LINE L1 -5 6161 5890 2247 100 7 0 chr2 134325524 134325824 -118930759 - AluY SINE Alu -9 302 1 1112 225 18 33 chr2 134325824 134325877 -118930706 - L1ME1 LINE L1 -276 5890 5838 3447 218 93 36 chr2 134325888 134326943 -118929640 + L1MD2 LINE L1 5273 6434 -319 2364 96 0 0 chr2 134326943 134327245 -118929338 - AluSq SINE Alu -11 302 1 3447 218 93 36 chr2 134327245 134327574 -118929009 + L1MD2 LINE L1 6434 6743 -10 758 179 12 29 chr2 134327692 134327957 -118928626 + CT-rich Low_complexity Low_complexity 1 260 0 2243 127 0 0 chr2 134327968 134328275 -118928308 - AluSg SINE Alu -3 307 1 4229 62 48 0 chr2 134328323 134328887 -118927696 + LTR10C LTR ERV1 1 591 0 250 277 135 77 chr2 134329592 134329866 -118926717 - L2 LINE L2 0 3272 2983 446 224 32 16 chr2 134329928 134330053 -118926530 - LTR67 LTR ERVL -2 555 429 1433 204 21 31 chr2 134330235 134330677 -118925906 + LTR2B LTR ERV1 1 490 0 433 289 37 0 chr2 134331058 134331193 -118925390 + L1ME LINE L1 5557 5696 -425 2076 69 109 0 chr2 134331207 134331483 -118925100 + AluYa5 SINE Alu 1 306 -5 2239 102 0 0 chr2 134331553 134331837 -118924746 + AluSx SINE Alu 17 300 -12 232 320 0 0 chr2 134333050 134333125 -118923458 + MIR SINE MIR 72 146 -116 214 183 83 17 chr2 134333574 134333634 -118922949 + L2 LINE L2 3191 3254 -18 957 150 0 0 chr2 134334191 134334324 -118922259 - AluSq/x SINE Alu -179 133 1 998 260 20 55 chr2 134335332 134335479 -118921104 - L1M4 LINE L1 -2309 3837 3686 2425 109 0 0 chr2 134335479 134335792 -118920791 - AluSq SINE Alu 0 313 1 998 260 20 55 chr2 134335792 134336044 -118920539 - L1M4 LINE L1 -2460 3686 3452 1669 282 25 14 chr2 134336184 134336737 -118919846 - L1MCb LINE L1 -5483 562 4 181 210 57 169 chr2 134336836 134336960 -118919623 + MIR SINE MIR 35 144 -64 1692 194 86 0 chr2 134337027 134337387 -118919196 + LTR32 LTR ERVL 9 399 -72 225 148 19 37 chr2 134337939 134337993 -118918590 + (CACCC)n Simple_repeat Simple_repeat 2 54 0 305 325 92 8 chr2 134338885 134339005 -118917578 + L2 LINE L2 3143 3272 0 683 259 63 43 chr2 134339876 134340131 -118916452 - LTR40a LTR ERVL 0 519 260 1601 114 180 12 chr2 134340148 134340403 -118916180 - AluSg1 SINE Alu -11 298 1 232 316 141 17 chr2 134341389 134341566 -118915017 + L2 LINE L2 3024 3222 -91 2382 103 3 0 chr2 134341645 134341955 -118914628 - AluSx SINE Alu -1 311 1 519 237 0 15 chr2 134342807 134343150 -118913433 + (TG)n Simple_repeat Simple_repeat 1 337 0 2619 116 39 35 chr2 134344709 134345140 -118911443 + MER57B LTR ERV1 1 433 -1 182 239 87 0 chr2 134345676 134345722 -118910861 - MIR3 SINE MIR -53 155 106 358 166 13 68 chr2 134346279 134346597 -118909986 + (CA)n Simple_repeat Simple_repeat 1 300 0 324 183 20 54 chr2 134346620 134347032 -118909551 + (CA)n Simple_repeat Simple_repeat 1 398 0 238 352 74 12 chr2 134347760 134347922 -118908661 + MIR SINE MIR 20 191 -71 350 335 57 57 chr2 134348612 134348875 -118907708 - L2 LINE L2 -6 3266 3004 280 332 107 34 chr2 134348931 134349136 -118907447 - MIR SINE MIR -22 240 21 491 235 31 68 chr2 134349771 134349933 -118906650 + HsTC2 DNA Tc2 4 159 -1739 320 328 17 0 chr2 134349945 134350064 -118906519 - MER94 DNA DNA -12 122 2 1038 256 63 9 chr2 134350078 134350426 -118906157 + HsTC2 DNA Tc2 174 540 -1358 486 324 40 32 chr2 134350696 134350943 -118905640 + MIR SINE MIR 14 262 0 1983 155 45 98 chr2 134351066 134351105 -118905478 - MLT2C2 LTR ERVL 0 464 424 195 69 0 0 chr2 134351105 134351134 -118905449 + (CAGA)n Simple_repeat Simple_repeat 2 30 0 1983 155 45 98 chr2 134351134 134351584 -118904999 - MLT2C2 LTR ERVL -40 424 1 362 264 45 18 chr2 134352293 134352403 -118904180 + MIR SINE MIR 34 146 -62 2140 156 31 24 chr2 134354497 134354726 -118901857 - MSTB LTR MaLR -5 421 186 2381 106 0 0 chr2 134354726 134355028 -118901555 - AluSq SINE Alu -11 302 1 2140 156 31 24 chr2 134355028 134355214 -118901369 - MSTB LTR MaLR -240 186 3 267 54 0 0 chr2 134355215 134355252 -118901331 + (CA)n Simple_repeat Simple_repeat 2 38 0 1205 228 132 24 chr2 134355456 134355834 -118900749 - L1MD2 LINE L1 -2 6751 6333 1132 262 67 5 chr2 134355824 134356228 -118900355 - L1MD2 LINE L1 -754 5786 5358 * 556 151 58 17 chr2 134356253 134356425 -118900158 + CT-rich Low_complexity Low_complexity 2 180 0 950 224 66 13 chr2 134356461 134356764 -118899819 - L1MD2 LINE L1 -1231 5309 4991 3998 97 16 28 chr2 134356766 134357383 -118899200 - MER4B LTR ERV1 0 610 1 2321 139 3 18 chr2 134357387 134357768 -118898815 - MER4B-int LTR ERV1 -5 6753 6379 596 147 0 0 chr2 134357768 134357863 -118898720 - MER4B-int LTR ERV1 -6460 298 204 305 294 0 0 chr2 134357880 134357982 -118898601 - L1MD2 LINE L1 -1549 4991 4890 3022 268 42 16 chr2 134358020 134359174 -118897409 - L1MD2 LINE L1 -1796 4744 3561 1607 268 76 16 chr2 134359184 134359684 -118896899 + MER68 LTR ERV1 22 551 -11 2167 266 67 12 chr2 134359691 134360555 -118896028 - L1MD2 LINE L1 -2972 3568 2657 633 234 52 34 chr2 134360566 134360835 -118895748 - L1MD2 LINE L1 -3962 2578 2305 627 203 0 39 chr2 134360855 134361008 -118895575 - L1MD2 LINE L1 -4987 1556 1410 2837 239 64 48 chr2 134361023 134362040 -118894543 - L1MDb LINE L1 -4245 2161 1162 2044 152 0 7 chr2 134362040 134362343 -118894240 - AluSx SINE Alu -11 301 1 2837 239 64 48 chr2 134362343 134363304 -118893279 - L1MDb LINE L1 -5244 1162 11 588 292 148 7 chr2 134363925 134364425 -118892158 + MLT1L LTR MaLR 18 615 0 2511 109 43 3 chr2 134364428 134364778 -118891805 + THE1B LTR MaLR 1 364 0 405 329 36 0 chr2 134364954 134365121 -118891462 - MIR3 SINE MIR -3 205 33 382 324 62 0 chr2 134365836 134365981 -118890602 + MER5B DNA MER1_type 9 162 -16 231 174 14 58 chr2 134367177 134367246 -118889337 + CT-rich Low_complexity Low_complexity 2 67 0 341 269 175 37 chr2 134367338 134367802 -118888781 + L2 LINE L2 643 1170 -2144 253 318 24 92 chr2 134367771 134368108 -118888475 + L2 LINE L2 2852 3165 -148 * 487 79 0 40 chr2 134368109 134368185 -118888398 - L1MA5A LINE L1 0 6297 6225 1830 200 137 7 chr2 134368185 134369013 -118887570 + L1MC/D LINE L1 4851 5783 -576 1054 220 74 60 chr2 134369013 134369349 -118887234 - MER2 DNA MER2_type 0 344 4 818 137 8 0 chr2 134369373 134369497 -118887086 + Tigger3(Golem) DNA MER2_type 47 171 -2858 263 210 49 25 chr2 134369497 134369578 -118887005 + L1MD2 LINE L1 6274 6356 -3 3294 116 23 6 chr2 134369623 134370104 -118886479 + Tigger3(Golem) DNA MER2_type 2519 3007 -22 2060 111 3 7 chr2 134370105 134370394 -118886189 + AluSc SINE Alu 1 288 -21 501 133 44 0 chr2 134370396 134370531 -118886052 + (TA)n Simple_repeat Simple_repeat 2 142 0 2476 224 25 9 chr2 134370531 134371108 -118885475 + L1MD2 LINE L1 5745 6337 -22 337 239 79 93 chr2 134371188 134371468 -118885115 + LTR16B LTR ERVL 9 284 -180 397 336 121 29 chr2 134371715 134372063 -118884520 + L2 LINE L2 2890 3269 -3 192 260 52 99 chr2 134374825 134374939 -118881644 + MIR3 SINE MIR 18 125 -103 1544 269 69 21 chr2 134374939 134375464 -118881119 + MLT1H1 LTR MaLR 2 551 -4 192 260 52 99 chr2 134375464 134375524 -118881059 + MIR3 SINE MIR 125 186 -42 500 353 106 17 chr2 134376770 134377313 -118879270 + L1MEd LINE L1 1034 1657 -4653 13107 101 7 26 chr2 134377377 134379394 -118877189 + L1PA7 LINE L1 8 2030 -4431 203 59 0 29 chr2 134379396 134379430 -118877153 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 7641 30 0 0 chr2 134379436 134380404 -118876179 - L1PA4 LINE L1 -24 6131 5164 * 26472 85 6 2 chr2 134380402 134384815 -118871768 + L1PA7 LINE L1 2027 6454 -15 232 216 39 49 chr2 134384799 134384901 -118871682 - L1MC4 LINE L1 -1327 6715 6615 * 183 80 0 0 chr2 134384905 134384930 -118871653 + (TA)n Simple_repeat Simple_repeat 1 25 0 207 0 0 0 chr2 134384930 134384953 -118871630 + (GA)n Simple_repeat Simple_repeat 2 24 0 2621 169 20 41 chr2 134385227 134385319 -118871264 - L1MB2 LINE L1 0 6171 6079 2178 119 7 0 chr2 134385319 134385614 -118870969 + AluSx SINE Alu 1 297 -15 2621 169 20 41 chr2 134385614 134386058 -118870525 - L1MB2 LINE L1 -92 6079 5646 813 110 16 39 chr2 134388425 134388552 -118868031 - L1PA16 LINE L1 -2 6164 6041 1545 133 86 30 chr2 134388553 134388891 -118867692 - LTR12 LTR ERV1 0 714 53 252 231 0 0 chr2 134388891 134388943 -118867640 - LTR30 LTR ERV1 -670 52 1 1522 125 0 0 chr2 134388943 134389159 -118867424 - L1PA16 LINE L1 -123 6043 5828 2067 101 10 14 chr2 134389160 134389456 -118867127 - AluSx SINE Alu -3 309 15 278 170 0 0 chr2 134389464 134389511 -118867072 + L1MC3 LINE L1 6200 6246 -1539 486 211 0 0 chr2 134389771 134389885 -118866698 + L1M4 LINE L1 2822 2935 -3211 10603 188 32 9 chr2 134389888 134392391 -118864192 + L1M2 LINE L1 3112 5665 -647 10186 232 34 16 chr2 134392389 134395547 -118861036 - L1MB2 LINE L1 -537 5647 2432 * 2761 3 0 0 chr2 134395676 134395969 -118860614 - AluYa5 SINE Alu -18 293 1 1257 234 101 39 chr2 134396077 134396492 -118860091 + MER77 LTR ERV1 154 594 -11 298 264 46 0 chr2 134396585 134396672 -118859911 - L1MB2 LINE L1 -3944 2202 2112 * 424 310 86 51 chr2 134396667 134397135 -118859448 - L1MEc LINE L1 -4182 2214 1731 867 273 79 35 chr2 134397156 134397675 -118858908 - L1M4c LINE L1 -4451 2687 1990 2375 132 56 42 chr2 134397676 134398084 -118858499 - MSTB LTR MaLR -12 414 1 8576 193 46 1 chr2 134398089 134399665 -118856918 - MSTB-int LTR MaLR -5 1646 1 2600 159 60 2 chr2 134399665 134400068 -118856515 - MSTB LTR MaLR 0 426 1 2422 87 0 13 chr2 134400079 134400389 -118856194 - AluY SINE Alu -5 306 1 778 246 14 53 chr2 134400400 134400757 -118855826 - L1M4c LINE L1 -4869 1986 1644 4670 231 52 15 chr2 134400757 134401572 -118855011 - L1M4c LINE L1 -5690 1169 305 1757 144 133 32 chr2 134401572 134401911 -118854672 - THE1C LTR MaLR 0 375 3 4670 231 52 15 chr2 134401911 134402142 -118854441 - L1M4c LINE L1 -6554 305 84 288 77 0 0 chr2 134402155 134402194 -118854389 + (TG)n Simple_repeat Simple_repeat 2 40 0 401 255 163 0 chr2 134402210 134402394 -118854189 + L1ME LINE L1 5581 5794 -327 4270 148 48 51 chr2 134402466 134402509 -118854074 - L1MB3 LINE L1 -8 6175 6133 2249 99 7 0 chr2 134402509 134402801 -118853782 - AluSc SINE Alu -15 294 1 4270 148 48 51 chr2 134402801 134403102 -118853481 - L1MB3 LINE L1 -50 6133 5832 1940 133 7 40 chr2 134403102 134403404 -118853179 - AluSq SINE Alu -21 292 1 4270 148 48 51 chr2 134403404 134403940 -118852643 - L1MB3 LINE L1 -351 5832 5297 1764 207 14 31 chr2 134403972 134404392 -118852191 - L1MB3 LINE L1 -819 5327 4915 408 197 51 29 chr2 134404395 134404532 -118852051 - L1MB3 LINE L1 -2868 3278 3139 474 18 0 0 chr2 134404958 134405013 -118851570 + (CA)n Simple_repeat Simple_repeat 2 56 0 296 235 31 20 chr2 134406659 134406757 -118849826 + GA-rich Low_complexity Low_complexity 3 101 0 191 306 90 45 chr2 134407175 134407309 -118849274 + L3 LINE CR1 586 725 -852 284 264 203 7 chr2 134407309 134407457 -118849126 - MER5A DNA MER1_type 0 189 13 834 284 6 10 chr2 134407989 134408265 -118848318 - L1ME2 LINE L1 -331 5833 5565 539 288 115 60 chr2 134408275 134408431 -118848152 - L2 LINE L2 0 3313 3167 2088 121 3 13 chr2 134408431 134408744 -118847839 + AluSx SINE Alu 1 310 -2 539 288 115 60 chr2 134408744 134409004 -118847579 - L2 LINE L2 -146 3167 2874 362 336 27 20 chr2 134409135 134409284 -118847299 + L2 LINE L2 3123 3272 0 213 335 129 44 chr2 134409302 134409666 -118846917 - L2 LINE L2 -8 3264 2870 1841 127 74 11 chr2 134409898 134410182 -118846401 + AluSx SINE Alu 1 302 -10 2049 251 45 39 chr2 134410239 134410575 -118846008 + L1ME3A LINE L1 5513 5856 -314 2486 69 0 3 chr2 134410575 134410880 -118845703 + AluY SINE Alu 1 304 -7 2049 251 45 39 chr2 134410880 134411189 -118845394 + L1ME3A LINE L1 5856 6162 -8 609 254 146 10 chr2 134411184 134411389 -118845194 + HAL1 LINE L1 79 311 -2196 * 954 211 241 29 chr2 134411445 134411819 -118844764 + HAL1 LINE L1 1428 1880 -627 1576 259 67 52 chr2 134411846 134412017 -118844566 + L1MC5 LINE L1 6226 6393 -1568 1799 180 52 46 chr2 134412017 134412405 -118844178 - MLT1B LTR MaLR 0 390 1 1576 259 67 52 chr2 134412405 134413186 -118843397 + L1MC5 LINE L1 6393 7219 -742 432 292 36 15 chr2 134413326 134413463 -118843120 - MER5B DNA MER1_type -35 143 4 585 185 28 0 chr2 134413543 134413651 -118842932 - MER5A DNA MER1_type 0 189 79 791 234 35 0 chr2 134413703 134413874 -118842709 - MER5B DNA MER1_type -1 177 1 745 287 59 36 chr2 134413874 134414317 -118842266 + L1MC5 LINE L1 7330 7782 -179 230 162 29 44 chr2 134414338 134414406 -118842177 + L1MC5 LINE L1 7869 7935 -26 933 284 91 10 chr2 134414465 134414859 -118841724 + HAL1 LINE L1 1936 2361 -146 209 264 47 75 chr2 134415509 134415615 -118840968 + L3 LINE CR1 1415 1517 -60 595 273 169 36 chr2 134416379 134416800 -118839783 - L2 LINE L2 -10 3303 2827 698 300 121 55 chr2 134416840 134417436 -118839147 - L2 LINE L2 -633 2681 2047 186 359 0 0 chr2 134418027 134418091 -118838492 + L3 LINE CR1 319 382 -1195 1208 219 124 75 chr2 134418757 134419263 -118837320 - MER65B LTR ERV1 0 531 1 466 276 119 75 chr2 134419268 134419798 -118836785 + L1MEd LINE L1 589 1141 -4978 550 350 46 20 chr2 134419814 134419874 -118836709 + L1MEd LINE L1 1223 1280 -5030 22 35 0 0 chr2 134419874 134419903 -118836680 + AT_rich Low_complexity Low_complexity 1 29 0 550 350 46 20 chr2 134419903 134420120 -118836463 + L1MEd LINE L1 1280 1536 -4774 226 258 56 11 chr2 134420128 134420217 -118836366 + HAL1 LINE L1 1630 1722 -785 435 332 49 57 chr2 134420561 134420826 -118835757 + L1MEd LINE L1 2294 2556 -3573 383 327 40 27 chr2 134420844 134420994 -118835589 - MIR SINE MIR -102 160 9 676 268 138 55 chr2 134421074 134421529 -118835054 - L2 LINE L2 0 3313 2821 1922 201 8 6 chr2 134421774 134422138 -118834445 - MLT1A1 LTR MaLR 0 365 1 2087 71 4 0 chr2 134422630 134422898 -118833685 - AluY SINE Alu -15 296 28 266 200 138 0 chr2 134423985 134424050 -118832533 + MER103 DNA DNA 47 120 -46 231 333 113 34 chr2 134424380 134424557 -118832026 + MIR SINE MIR 17 207 -55 267 223 142 19 chr2 134429304 134429444 -118827139 + MIR SINE MIR 93 256 -6 2228 172 65 5 chr2 134430515 134430917 -118825666 - MSTB LTR MaLR 0 426 1 188 357 48 32 chr2 134430985 134431111 -118825472 + MIR SINE MIR 20 147 -115 286 267 76 8 chr2 134431717 134431848 -118824735 + HAL1 LINE L1 947 1086 -1421 23 0 0 0 chr2 134431951 134431974 -118824609 + AT_rich Low_complexity Low_complexity 1 23 0 341 286 134 47 chr2 134432088 134432364 -118824219 + HAL1 LINE L1 1370 1669 -838 370 279 112 52 chr2 134432628 134432648 -118823935 + L1MC4a LINE L1 2193 2210 -4172 1725 134 22 26 chr2 134432648 134432961 -118823622 + AluSx SINE Alu 1 312 0 370 279 112 52 chr2 134432961 134433076 -118823507 + L1MC4a LINE L1 2210 2317 -4065 2173 100 7 13 chr2 134433076 134433385 -118823198 + AluSx SINE Alu 1 307 -5 370 279 112 52 chr2 134433385 134433604 -118822979 + L1MC4a LINE L1 2317 2600 -3782 673 275 97 20 chr2 134434199 134434497 -118822086 + L1MC4a LINE L1 3121 3441 -2941 7569 123 32 12 chr2 134434503 134436597 -118819986 - L1PA12 LINE L1 -1 6167 4052 311 343 111 52 chr2 134436597 134437020 -118819563 + L1MC4a LINE L1 3433 3880 -2502 249 293 0 0 chr2 134437066 134437124 -118819459 + L1P LINE L1 3717 3774 -2372 1624 145 45 75 chr2 134437339 134437697 -118818886 - LTR42 LTR ERVL -148 347 1 1028 317 159 29 chr2 134437725 134438751 -118817832 + L1MC4a LINE L1 4303 5464 -918 589 280 149 54 chr2 134438785 134439374 -118817209 + L1MC4a LINE L1 5503 6147 -1897 258 32 0 0 chr2 134439434 134439465 -118817118 + (TG)n Simple_repeat Simple_repeat 1 31 0 384 319 20 25 chr2 134440341 134440512 -118816071 - MIR SINE MIR -63 145 18 2114 97 10 7 chr2 134441078 134441378 -118815205 + AluSq SINE Alu 1 301 -12 1555 248 67 49 chr2 134442368 134443059 -118813524 - HAL1b LINE L1 -201 1147 445 285 170 0 0 chr2 134443085 134443138 -118813445 - L1MB4 LINE L1 0 6180 6128 2338 85 3 0 chr2 134443259 134443564 -118813019 - AluSg SINE Alu -4 306 1 229 239 97 111 chr2 134443569 134443858 -118812725 - HAL1b LINE L1 -804 544 260 2058 35 0 11 chr2 134446118 134446378 -118810205 + AluY SINE Alu 42 298 -13 422 283 75 33 chr2 134446473 134446685 -118809898 - L2 LINE L2 0 3313 3093 564 266 85 41 chr2 134447676 134447734 -118808849 + L1ME4a LINE L1 5557 5611 -510 2028 114 3 10 chr2 134447734 134448041 -118808542 + AluSx SINE Alu 1 305 -7 564 266 85 41 chr2 134448041 134448301 -118808282 + L1ME4a LINE L1 5611 5889 -232 361 328 0 0 chr2 134448451 134448567 -118808016 + L2 LINE L2 3184 3299 -14 3040 169 33 5 chr2 134448572 134449123 -118807460 - L1MB7 LINE L1 -260 6422 5857 1692 130 0 71 chr2 134449123 134449292 -118807291 - AluSx SINE Alu -11 301 164 1786 125 3 24 chr2 134449292 134449580 -118807003 - AluSp SINE Alu -18 295 14 1692 130 0 71 chr2 134449580 134449734 -118806849 - AluSx SINE Alu -148 164 1 966 113 0 0 chr2 134449737 134449870 -118806713 - AluSq/x SINE Alu -179 133 1 4688 206 96 11 chr2 134449871 134450099 -118806484 - L1MB7 LINE L1 -776 5868 5661 243 0 0 0 chr2 134450099 134450126 -118806457 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 4688 206 96 11 chr2 134450126 134451149 -118805434 - L1MB7 LINE L1 -983 5661 4511 5892 111 14 8 chr2 134451181 134452586 -118803997 - L1PA11 LINE L1 0 6174 4748 806 61 0 9 chr2 134452787 134452901 -118803682 + (TTCC)n Simple_repeat Simple_repeat 3 115 0 1590 175 10 25 chr2 134452937 134453251 -118803332 - AluSx SINE Alu -3 309 1 1914 261 57 0 chr2 134455961 134456467 -118800116 + REP3 LTR ERV 10 544 -18 280 289 164 0 chr2 134457183 134457311 -118799272 - MER5B DNA MER1_type -26 152 4 261 0 0 0 chr2 134457892 134457921 -118798662 + (TG)n Simple_repeat Simple_repeat 2 30 0 326 308 101 35 chr2 134458107 134458276 -118798307 - MIR SINE MIR -75 187 8 336 304 29 0 chr2 134458432 134458570 -118798013 + L1ME4a LINE L1 5963 6104 -17 20346 148 31 22 chr2 134459406 134464163 -118792420 - L1P3 LINE L1 -1490 4971 2 2179 246 59 40 chr2 134464222 134464518 -118792065 - L1MB7 LINE L1 -2726 3918 3629 2144 72 0 34 chr2 134464518 134464974 -118791609 - AluY SINE Alu 0 446 1 2179 246 59 40 chr2 134464974 134465591 -118790992 - L1MB7 LINE L1 -3015 3629 2987 22 0 0 0 chr2 134465591 134465613 -118790970 + AT_rich Low_complexity Low_complexity 1 22 0 2467 223 133 28 chr2 134465619 134466327 -118790256 - L1MB7 LINE L1 -5745 797 16 238 270 16 0 chr2 134466753 134466816 -118789767 + GA-rich Low_complexity Low_complexity 3 66 0 1904 171 79 8 chr2 134468803 134469183 -118787400 + LTR49 LTR ERV1 4 410 -185 2422 134 21 15 chr2 134469183 134469572 -118787011 + MER57A LTR ERV1 13 403 0 596 169 135 62 chr2 134469572 134469750 -118786833 + LTR49 LTR ERV1 405 595 0 685 249 53 0 chr2 134470007 134470176 -118786407 - MER45A DNA AcHobo 0 178 1 324 350 0 0 chr2 134470211 134470311 -118786272 - MIR SINE MIR -143 119 20 357 158 13 13 chr2 134470354 134470430 -118786153 - MER116 DNA Mariner -4 76 1 375 314 73 29 chr2 134470825 134471140 -118785443 + L1ME4a LINE L1 5563 5891 -230 345 289 79 18 chr2 134472334 134472448 -118784135 - MER94 DNA DNA -9 125 5 221 98 24 0 chr2 134475287 134475328 -118781255 + (TCCC)n Simple_repeat Simple_repeat 4 45 0 502 262 64 92 chr2 134476571 134476975 -118779608 + MLT1J LTR MaLR 110 502 -9 402 237 30 15 chr2 134479134 134479269 -118777314 + MER69 DNA AcHobo 38 174 -2352 2675 48 0 0 chr2 134481985 134482296 -118774287 + AluY SINE Alu 1 311 0 2783 188 20 29 chr2 134483600 134483641 -118772942 - L1MB3 LINE L1 -7 6176 6136 2104 116 0 0 chr2 134483641 134483918 -118772665 + AluSx SINE Alu 1 277 -35 292 69 0 35 chr2 134483923 134483981 -118772602 + (TAAAA)n Simple_repeat Simple_repeat 2 57 0 2783 188 20 29 chr2 134483981 134484530 -118772053 - L1MB3 LINE L1 -51 6132 5585 515 209 0 21 chr2 134486115 134486459 -118770124 + (TG)n Simple_repeat Simple_repeat 1 336 0 220 276 0 26 chr2 134486472 134486548 -118770035 + (TG)n Simple_repeat Simple_repeat 1 74 0 203 167 0 0 chr2 134486908 134486944 -118769639 + (TGAA)n Simple_repeat Simple_repeat 2 37 0 388 250 47 54 chr2 134487952 134488100 -118768483 - L2 LINE L2 0 3313 3167 1181 230 184 35 chr2 134488209 134488643 -118767940 + MLT1D LTR MaLR 1 499 -6 5578 131 34 17 chr2 134488810 134489024 -118767559 - L1PB4 LINE L1 -1 6155 5946 1992 114 0 20 chr2 134489024 134489321 -118767262 - AluSq SINE Alu -5 308 18 5578 131 34 17 chr2 134489321 134490152 -118766431 - L1PB4 LINE L1 -210 5946 5101 1829 235 56 48 chr2 134490160 134490806 -118765777 - L1ME2 LINE L1 -9 6224 5574 3932 205 76 27 chr2 134490833 134492702 -118763881 - L1MB3 LINE L1 -122 6061 4093 2555 28 3 0 chr2 134492707 134492995 -118763588 - AluY SINE Alu -6 305 17 1092 189 15 30 chr2 134492995 134493259 -118763324 - L1MB3 LINE L1 -2120 4026 3767 1790 224 48 8 chr2 134493267 134493927 -118762656 - L1ME2 LINE L1 -749 5466 4856 292 235 0 29 chr2 134493932 134494000 -118762583 + MER21B LTR ERV1 1 66 -797 286 288 41 0 chr2 134494035 134494108 -118762475 + MER21B LTR ERV1 19 94 -769 * 335 250 14 0 chr2 134494106 134494178 -118762405 + MER21B LTR ERV1 43 115 -748 183 42 0 0 chr2 134494387 134494411 -118762172 + (T)n Simple_repeat Simple_repeat 1 24 0 3326 213 56 20 chr2 134494731 134495432 -118761151 + MER21B LTR ERV1 134 859 -4 41825 63 5 0 chr2 134495467 134500723 -118755860 + L1P LINE L1 2 5280 -866 24 0 0 0 chr2 134500736 134500760 -118755823 + AT_rich Low_complexity Low_complexity 1 24 0 892 174 25 31 chr2 134500761 134500922 -118755661 + AluJb SINE Alu 132 291 -21 913 164 109 71 chr2 134500922 134500976 -118755607 - L1M2 LINE L1 -481 5810 5760 2852 3 0 0 chr2 134500976 134501275 -118755308 + AluYa5 SINE Alu 1 299 -12 913 164 109 71 chr2 134501275 134501458 -118755125 - L1M2 LINE L1 -531 5760 5564 704 235 8 0 chr2 134501481 134501613 -118754970 + MER8 DNA MER2_type 107 239 0 1599 135 36 0 chr2 134501623 134501897 -118754686 - L1M2 LINE L1 -753 5538 5255 301 282 8 43 chr2 134501924 134502041 -118754542 - L1ME2 LINE L1 -1357 4858 4746 1757 168 7 13 chr2 134502041 134502344 -118754239 + AluJo SINE Alu 11 311 -1 1023 253 10 3 chr2 134502392 134502681 -118753902 - L1ME2 LINE L1 -1457 4758 4468 2679 232 94 41 chr2 134502687 134504131 -118752452 - L1ME2 LINE L1 -2750 3465 2014 1885 246 113 37 chr2 134504273 134505252 -118751331 - L1ME2 LINE L1 -4343 2053 1000 452 252 57 29 chr2 134505275 134505485 -118751098 - L1ME2 LINE L1 -5455 941 726 * 44115 30 21 1 chr2 134505478 134511510 -118745073 - L1PA2 LINE L1 0 6155 1 1942 266 59 24 chr2 134511518 134512214 -118744369 - L1ME2 LINE L1 -5640 756 37 362 347 62 6 chr2 134512355 134512531 -118744052 + MIR SINE MIR 61 246 -16 306 189 9 132 chr2 134512530 134512636 -118743947 - MIR SINE MIR -130 132 40 * 274 242 32 25 chr2 134513076 134513233 -118743350 + (TA)n Simple_repeat Simple_repeat 1 158 0 196 94 47 31 chr2 134513303 134513367 -118743216 + (TA)n Simple_repeat Simple_repeat 1 65 0 290 287 52 17 chr2 134513474 134513589 -118742994 + MIR SINE MIR 54 172 -90 746 303 45 29 chr2 134515073 134515538 -118741045 + L2 LINE L2 2493 3012 -301 277 221 103 0 chr2 134515541 134515609 -118740974 + MLT2D LTR ERVL 206 280 -134 574 272 50 55 chr2 134515686 134515888 -118740695 + MER63A DNA MER1_type 5 205 -5 429 239 42 48 chr2 134515930 134516097 -118740486 + L2 LINE L2 3142 3307 -6 530 154 218 9 chr2 134516740 134516850 -118739733 - AluJb SINE Alu -178 134 2 2190 108 0 40 chr2 134516878 134517202 -118739381 + AluSx SINE Alu 1 311 -1 277 255 41 31 chr2 134517603 134517701 -118738882 + LTR33 LTR ERVL 68 166 -355 21 57 0 0 chr2 134518654 134518689 -118737894 + AT_rich Low_complexity Low_complexity 1 35 0 258 299 37 22 chr2 134518732 134518866 -118737717 + L1ME LINE L1 5561 5696 -425 359 263 32 0 chr2 134518866 134518961 -118737622 - L2 LINE L2 -2 3311 3214 262 318 56 8 chr2 134519058 134519184 -118737399 + L1MDa LINE L1 22 153 -6387 183 80 0 0 chr2 134519235 134519260 -118737323 + (T)n Simple_repeat Simple_repeat 1 25 0 959 310 70 13 chr2 134519649 134520188 -118736395 + L1MDa LINE L1 1111 1680 -4860 * 1817 221 34 8 chr2 134520184 134520789 -118735794 + L1M4 LINE L1 4933 5555 -623 378 284 161 50 chr2 134522574 134522990 -118733593 - MLT1K LTR MaLR -3 585 124 249 33 0 0 chr2 134524274 134524304 -118732279 + (TG)n Simple_repeat Simple_repeat 1 30 0 236 331 35 42 chr2 134524974 134525116 -118731467 + MIR3 SINE MIR 3 143 -65 25 0 0 0 chr2 134525465 134525490 -118731093 + AT_rich Low_complexity Low_complexity 1 25 0 2087 187 61 110 chr2 134526021 134526846 -118729737 - LTR1B LTR ERV1 -42 784 1 247 202 22 0 chr2 134527105 134527194 -118729389 + (TG)n Simple_repeat Simple_repeat 1 91 0 431 363 72 44 chr2 134527356 134527789 -118728794 + HAL1b LINE L1 84 528 -820 6904 38 4 7 chr2 134528164 134529009 -118727574 + L1PA5 LINE L1 5313 6154 0 245 268 0 0 chr2 134529030 134529101 -118727482 + A-rich Low_complexity Low_complexity 1 71 0 5021 83 123 21 chr2 134529243 134529350 -118727233 - LTR12 LTR ERV1 0 826 731 2324 88 0 16 chr2 134529350 134529655 -118726928 + AluSq SINE Alu 1 300 -13 5021 83 123 21 chr2 134529655 134530297 -118726286 - LTR12 LTR ERV1 -95 731 1 382 231 158 29 chr2 134530417 134530541 -118726042 + MER5A DNA MER1_type 36 189 0 346 43 57 14 chr2 134530619 134530689 -118725894 + (TCTA)n Simple_repeat Simple_repeat 2 74 0 724 248 101 64 chr2 134530745 134530910 -118725673 - L1ME LINE L1 -2199 3881 3724 1568 151 0 29 chr2 134530910 134531155 -118725428 + AluJb SINE Alu 1 238 -74 724 248 101 64 chr2 134531155 134531586 -118724997 - L1ME LINE L1 -2356 3724 3263 * 2232 218 38 0 chr2 134531580 134532134 -118724449 - L1MB7 LINE L1 -1 6994 6420 * 6925 243 53 22 chr2 134532133 134534739 -118721844 - L1MB7 LINE L1 -746 6211 3525 3448 70 27 5 chr2 134534804 134535247 -118721336 + MLT2A2 LTR ERVL 1 453 0 1114 281 70 93 chr2 134535730 134536648 -118719935 - L1MB7 LINE L1 -5923 936 40 2164 295 72 17 chr2 134536682 134538750 -118717833 - L1ME LINE L1 -2800 3280 1128 208 93 23 23 chr2 134538881 134538924 -118717659 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 257 244 1 52 chr2 134539031 134539157 -118717426 - L1ME LINE L1 -5325 745 649 798 135 0 118 chr2 134539496 134539666 -118716917 - Tigger1 DNA MER2_type -2267 151 2 302 336 26 26 chr2 134539874 134539987 -118716596 - MIR SINE MIR -63 145 33 249 273 0 0 chr2 134539998 134540053 -118716530 - L2 LINE L2 -8 3264 3210 924 167 65 124 chr2 134540244 134540667 -118715916 + MLT1B LTR MaLR 1 344 -46 212 182 0 36 chr2 134540674 134540729 -118715854 + (CATA)n Simple_repeat Simple_repeat 4 56 0 313 274 60 51 chr2 134541019 134541136 -118715447 - L2 LINE L2 -188 3084 2967 390 251 102 30 chr2 134542095 134542262 -118714321 + L1ME4a LINE L1 5725 5903 -218 475 241 60 0 chr2 134542284 134542417 -118714166 - MER112 DNA MER1_type -10 250 110 2019 139 53 31 chr2 134542432 134542848 -118713735 + MSTB1 LTR MaLR 8 432 0 395 226 189 32 chr2 134542932 134543122 -118713461 + L1ME4a LINE L1 5902 6121 0 2100 119 3 0 chr2 134543278 134543572 -118713011 + AluY SINE Alu 1 295 -16 2228 192 153 15 chr2 134543660 134544208 -118712375 - MLT1E3 LTR MaLR 0 624 1 245 268 134 10 chr2 134544473 134544570 -118712013 - MIR SINE MIR -63 145 37 260 260 30 40 chr2 134544729 134544829 -118711754 - MER117 DNA MER1_type -45 152 54 212 286 89 0 chr2 134545475 134545531 -118711052 - L2 LINE L2 -65 3207 3147 202 269 67 50 chr2 134546437 134546556 -118710027 - L2 LINE L2 -26 3287 3167 194 282 99 70 chr2 134546613 134546755 -118709828 - L2 LINE L2 0 3272 3127 1664 181 31 13 chr2 134547370 134547751 -118708832 + MLT1B LTR MaLR 2 389 -1 1255 78 0 6 chr2 134549341 134549508 -118707075 + AluSg SINE Alu 1 166 -144 660 175 0 18 chr2 134549509 134549623 -118706960 - LTR12 LTR ERV1 -244 470 359 280 293 0 0 chr2 134549623 134549722 -118706861 - LTR30 LTR ERV1 -98 624 526 1825 144 116 31 chr2 134549723 134550199 -118706384 - pTR5 LTR ERV1 -432 2006 1 2147 169 77 33 chr2 134550258 134550779 -118705804 - pTR5 LTR ERV1 -1391 1047 504 * 4976 86 0 0 chr2 134550747 134551435 -118705148 - HERV17 LTR ERV1 -209 8190 7503 665 166 41 33 chr2 134551433 134551745 -118704838 - HERV17 LTR ERV1 -3421 4978 703 * 243 254 28 0 chr2 134551777 134551848 -118704735 - MER112 DNA MER1_type -7 253 181 290 235 76 0 chr2 134551852 134551971 -118704612 - MER112 DNA MER1_type -34 226 99 332 292 44 9 chr2 134552197 134552310 -118704273 - L1ME LINE L1 -682 5482 5366 421 270 79 6 chr2 134552379 134552557 -118704026 - L1ME LINE L1 -874 5272 5082 530 242 8 8 chr2 134552578 134552702 -118703881 - FLAM_C SINE Alu -7 126 3 647 334 74 32 chr2 134552910 134553437 -118703146 - L1ME LINE L1 -1449 4697 4149 227 208 108 17 chr2 134553459 134553579 -118703004 - L1ME4a LINE L1 -1 6120 5990 2432 244 29 20 chr2 134553603 134554319 -118702264 - L1ME1 LINE L1 -21 6145 5423 252 143 0 0 chr2 134554345 134554394 -118702189 - L1MC3 LINE L1 -16 7769 7721 463 213 21 0 chr2 134554394 134554488 -118702095 + Tigger5 DNA MER2_type 1 96 -2227 * 979 119 83 42 chr2 134554487 134554680 -118701903 + Tigger5 DNA MER2_type 2123 2323 0 1141 189 33 4 chr2 134554699 134554942 -118701641 - L1MC3 LINE L1 -377 7391 7142 * 2081 183 94 45 chr2 134554936 134555298 -118701285 - L1MC3 LINE L1 -838 6930 6530 2246 98 0 19 chr2 134555298 134555615 -118700968 - AluY SINE Alu 0 311 1 2081 183 94 45 chr2 134555615 134555803 -118700780 - L1MC3 LINE L1 -1238 6530 6353 1138 184 123 136 chr2 134555803 134556324 -118700259 - MER67D LTR ERV1 0 514 1 1134 163 34 102 chr2 134556325 134556491 -118700092 - L1MC3 LINE L1 -1413 6355 6218 2248 101 11 0 chr2 134556491 134556808 -118699775 + AluSp SINE Alu 1 320 0 1134 163 34 102 chr2 134556808 134556964 -118699619 - L1MC3 LINE L1 -1550 6218 6053 1436 148 10 80 chr2 134556964 134557275 -118699308 - MLT1B LTR MaLR 0 390 102 2216 99 7 10 chr2 134557275 134557569 -118699014 - AluSq SINE Alu -14 299 7 3402 226 28 14 chr2 134557622 134558935 -118697648 - L1MC3 LINE L1 -746 5383 4598 3895 206 33 31 chr2 134558945 134560460 -118696123 + L1MB5 LINE L1 4651 6172 -2 1263 256 91 32 chr2 134560459 134561087 -118695496 - L1MC3 LINE L1 -1524 4605 3941 * 292 250 83 0 chr2 134561086 134561182 -118695401 - L1MC3 LINE L1 -539 7246 7143 * 540 142 28 9 chr2 134561177 134561283 -118695300 - L1MC3 LINE L1 -1444 6341 6234 22 0 0 0 chr2 134561611 134561633 -118694950 + AT_rich Low_complexity Low_complexity 1 22 0 5913 246 66 29 chr2 134562090 134562216 -118694367 - L1M4 LINE L1 -1295 5349 5229 2021 127 0 11 chr2 134562216 134562500 -118694083 + AluSx SINE Alu 1 281 -31 5913 246 66 29 chr2 134562500 134565185 -118691398 - L1M4 LINE L1 -1415 5229 2416 2771 229 51 95 chr2 134565192 134567358 -118689225 - L1M4 LINE L1 -4482 2164 76 1714 253 51 57 chr2 134567447 134568269 -118688314 - L1MC3 LINE L1 -4767 1362 546 1031 253 91 54 chr2 134568286 134568841 -118687742 + MER77 LTR ERV1 1 562 0 25 65 0 0 chr2 134569237 134569283 -118687300 + AT_rich Low_complexity Low_complexity 1 46 0 407 39 0 0 chr2 134569544 134569595 -118686988 - L1PA4 LINE L1 -81 6074 6024 752 52 0 0 chr2 134569599 134569695 -118686888 + L1PA3 LINE L1 6060 6155 0 362 335 57 0 chr2 134569696 134569908 -118686675 - L1MEc LINE L1 -4929 1467 1244 207 245 0 0 chr2 134570288 134570337 -118686246 + (CA)n Simple_repeat Simple_repeat 2 50 0 252 200 0 0 chr2 134570347 134570402 -118686181 + (TA)n Simple_repeat Simple_repeat 2 56 0 2185 141 125 8 chr2 134570439 134570822 -118685761 - MSTA LTR MaLR 0 428 1 1105 175 11 121 chr2 134570864 134571212 -118685371 - MLT2D LTR ERVL -164 250 1 579 319 63 100 chr2 134571218 134571739 -118684844 - L1MC3 LINE L1 -5596 523 22 7395 198 88 40 chr2 134572537 134573465 -118683118 - L1MC3 LINE L1 -9 8194 7312 230 193 53 18 chr2 134573465 134573522 -118683061 - Charlie6 DNA MER1_type -1481 2019 1961 7395 198 88 40 chr2 134573522 134574599 -118681984 - L1MC3 LINE L1 -891 7312 6034 1640 190 29 89 chr2 134574601 134575049 -118681534 + MLT1D LTR MaLR 1 421 -84 448 255 0 0 chr2 134575063 134575169 -118681414 - L1MC3 LINE L1 -1792 5993 5888 427 167 67 0 chr2 134575169 134575259 -118681324 + MLT1D LTR MaLR 408 503 -2 229 200 0 0 chr2 134575292 134575347 -118681236 - L1MC3 LINE L1 -1110 5036 4982 1251 240 15 25 chr2 134575374 134575489 -118681094 - L1MC3 LINE L1 -743 5821 5706 2348 42 38 0 chr2 134575489 134575777 -118680806 + AluY SINE Alu 2 300 -11 1251 240 15 25 chr2 134575777 134576261 -118680322 - L1MC3 LINE L1 -858 5706 5400 1956 230 22 11 chr2 134576307 134576759 -118679824 + LTR53 LTR ERVL 1 457 -62 1763 228 82 20 chr2 134576764 134577325 -118679258 - L1MC3 LINE L1 -1206 5358 4763 952 250 135 0 chr2 134577332 134577628 -118678955 + MER2 DNA MER2_type 1 336 -9 4484 254 48 53 chr2 134577631 134578598 -118677985 - L1MC3 LINE L1 -1810 4754 3783 312 27 0 0 chr2 134578598 134578635 -118677948 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 1882 130 14 4 chr2 134578637 134578914 -118677669 - AluSc SINE Alu -29 280 1 4484 254 48 53 chr2 134578914 134579859 -118676724 - L1MC3 LINE L1 -2782 3782 2850 240 224 157 41 chr2 134579861 134580008 -118676575 - L1MC3 LINE L1 -4097 2467 2304 7666 148 42 18 chr2 134580011 134582346 -118674237 - L1MA7 LINE L1 0 6291 3895 1918 228 175 34 chr2 134582334 134582533 -118674050 - L1MC3 LINE L1 -4251 2313 2144 * 1535 194 26 13 chr2 134582533 134582837 -118673746 + AluJo SINE Alu 1 308 -4 1918 228 175 34 chr2 134582837 134583878 -118672705 - L1MC3 LINE L1 -4420 2144 716 264 59 0 0 chr2 134583882 134583916 -118672667 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 343 137 0 0 chr2 134583920 134583971 -118672612 - AluSg/x SINE Alu -44 256 206 743 282 23 5 chr2 134583971 134584191 -118672392 + L1MCb LINE L1 268 491 -5554 1206 272 105 55 chr2 134584294 134584610 -118671973 - L1MC3 LINE L1 -5347 698 399 2143 120 13 3 chr2 134584610 134584919 -118671664 + AluSx SINE Alu 1 312 0 1206 272 105 55 chr2 134584919 134585261 -118671322 - L1MC3 LINE L1 -5646 399 7 289 342 37 11 chr2 134586116 134586303 -118670280 + LTR16B LTR ERVL 132 323 -141 23 0 0 0 chr2 134587376 134587399 -118669184 + AT_rich Low_complexity Low_complexity 1 23 0 336 24 0 0 chr2 134587488 134587529 -118669054 + (CA)n Simple_repeat Simple_repeat 2 42 0 183 100 0 0 chr2 134587529 134587559 -118669024 + (GA)n Simple_repeat Simple_repeat 1 30 0 2218 109 3 0 chr2 134587828 134588121 -118668462 - AluSx SINE Alu -12 300 7 203 280 144 38 chr2 134588812 134588944 -118667639 - MIR SINE MIR -70 192 47 1895 96 0 4 chr2 134588963 134589212 -118667371 - AluSc SINE Alu -61 248 1 304 346 117 0 chr2 134589239 134589401 -118667182 + MER5A DNA MER1_type 1 181 -8 42534 58 4 1 chr2 134589801 134595924 -118660659 - L1PA5 LINE L1 0 6154 11 627 268 43 12 chr2 134597172 134597336 -118659247 + MIR SINE MIR 2 170 -92 705 270 104 62 chr2 134597342 134597890 -118658693 - MLT1G LTR MaLR -7 548 1 250 209 30 15 chr2 134597893 134597960 -118658623 + MIR SINE MIR 169 236 -26 205 277 21 32 chr2 134598377 134598471 -118658112 + MIR SINE MIR 26 118 -90 845 205 20 1 chr2 134599289 134599603 -118656980 + MER89 LTR ERV1 180 531 -28 1139 274 65 40 chr2 134599987 134600557 -118656026 - HAL1b LINE L1 -24 1324 741 363 285 99 34 chr2 134600750 134601013 -118655570 + L1ME3A LINE L1 5681 5960 -210 887 112 8 0 chr2 134601494 134601619 -118654964 + MSTA LTR MaLR 1 126 -302 759 41 0 52 chr2 134601620 134601717 -118654866 + MER30B DNA MER1_type 4 95 -95 3507 79 4 0 chr2 134601737 134602193 -118654390 - L1PA10 LINE L1 -175 5993 5536 2368 51 0 14 chr2 134602255 134602584 -118653999 - AluY SINE Alu 0 311 1 2120 131 3 0 chr2 134603002 134603314 -118653269 - AluSq SINE Alu 0 313 1 335 320 48 48 chr2 134603435 134603681 -118652902 - MIR SINE MIR -17 245 5 214 95 48 0 chr2 134605012 134605054 -118651529 + GA-rich Low_complexity Low_complexity 1 44 0 2105 184 18 8 chr2 134605319 134605705 -118650878 + MLT1B LTR MaLR 1 390 0 1545 166 7 18 chr2 134606008 134606291 -118650292 - L1MA6 LINE L1 -272 6028 5749 368 277 58 68 chr2 134606309 134606515 -118650068 - L1M4b LINE L1 -6464 395 192 935 77 35 42 chr2 134606552 134606695 -118649888 - THE1C LTR MaLR 0 375 234 349 45 0 0 chr2 134606704 134606748 -118649835 - L1PA5 LINE L1 -2 6152 6109 326 161 0 0 chr2 134606748 134606804 -118649779 - THE1C LTR MaLR -372 56 1 1392 158 25 8 chr2 134606804 134607045 -118649538 - LOR1b LTR ERV1 -168 293 49 1885 129 17 63 chr2 134607045 134607393 -118649190 - LTR10E LTR ERV1 -81 552 221 22 0 0 0 chr2 134607407 134607429 -118649154 + AT_rich Low_complexity Low_complexity 1 22 0 657 298 34 34 chr2 134607463 134607785 -118648798 + L1M4b LINE L1 613 934 -5925 4157 158 41 11 chr2 134608006 134608717 -118647866 + Tigger1 DNA MER2_type 1 732 -1686 1771 107 0 8 chr2 134608720 134608972 -118647611 - Tigger1 DNA MER2_type -1079 1339 1090 10161 121 32 31 chr2 134609002 134610315 -118646268 + Tigger1 DNA MER2_type 734 2051 -367 18949 33 0 0 chr2 134610315 134613211 -118643372 + L1PA3 LINE L1 3257 6152 -3 10161 121 32 31 chr2 134613211 134613578 -118643005 + Tigger1 DNA MER2_type 2051 2416 -2 2641 256 39 35 chr2 134613863 134615080 -118641503 + L1M4b LINE L1 1205 2414 -4545 2275 256 105 25 chr2 134615268 134616554 -118640029 + L1M4b LINE L1 2473 3808 -3149 472 284 106 9 chr2 134616599 134616817 -118639766 + HAL1 LINE L1 762 1000 -1507 2259 116 0 0 chr2 134616971 134617272 -118639311 - AluSx SINE Alu -11 301 1 2044 193 107 13 chr2 134617376 134617833 -118638750 - MLT1D LTR MaLR 0 505 6 244 339 64 9 chr2 134617866 134617975 -118638608 - L2 LINE L2 -19 3253 3139 191 282 65 97 chr2 134617992 134618116 -118638467 - L2 LINE L2 -28 3244 3125 416 287 36 30 chr2 134620465 134620632 -118635951 - MIR SINE MIR -48 214 47 26 50 0 0 chr2 134620861 134620901 -118635682 + AT_rich Low_complexity Low_complexity 1 40 0 2677 42 0 0 chr2 134620902 134621210 -118635373 - AluY SINE Alu -3 308 1 1150 107 0 0 chr2 134621794 134621944 -118634639 + AluSq/x SINE Alu 1 150 -163 938 278 128 36 chr2 134621946 134622699 -118633884 - L1M4 LINE L1 -837 5309 4488 893 304 9 19 chr2 134622711 134623030 -118633553 + MLT2C1 LTR ERVL 14 329 -68 237 250 14 14 chr2 134623226 134623298 -118633285 - L1MDa LINE L1 -4554 1986 1915 599 301 31 9 chr2 134623322 134623548 -118633035 - L1ME3A LINE L1 -48 6122 5892 198 271 51 0 chr2 134623753 134623812 -118632771 - L2 LINE L2 -25 3247 3186 412 349 41 14 chr2 134624182 134624400 -118632183 - L2 LINE L2 -353 2961 2738 229 262 0 0 chr2 134625644 134625705 -118630878 + MER3 DNA MER1_type 7 67 -142 1671 206 2 75 chr2 134625706 134626229 -118630354 - MER31A LTR ERV1 0 485 1 381 217 50 50 chr2 134626233 134626353 -118630230 + MER3 DNA MER1_type 69 188 -21 2147 97 23 3 chr2 134626519 134626818 -118629765 - AluSx SINE Alu -7 305 1 340 324 28 7 chr2 134626857 134626999 -118629584 + MER103 DNA DNA 4 148 -18 219 368 26 0 chr2 134627084 134627198 -118629385 + MIR SINE MIR 68 184 -78 1600 266 10 2 chr2 134627692 134628091 -118628492 + MLT1A2-int LTR MaLR 1328 1729 -6 1506 225 5 55 chr2 134628094 134628476 -118628107 + MLT1A2 LTR MaLR 1 363 -11 410 327 39 13 chr2 134629815 134629968 -118626615 + MIR SINE MIR 36 192 -70 485 291 91 15 chr2 134630445 134630644 -118625939 + MIR SINE MIR 31 244 -18 197 254 68 0 chr2 134631082 134631141 -118625442 + MIR SINE MIR 83 145 -63 354 320 0 61 chr2 134631600 134631747 -118624836 - MIR SINE MIR -115 147 10 240 331 124 7 chr2 134632677 134632822 -118623761 - MIR SINE MIR -27 235 74 223 346 47 31 chr2 134633313 134633440 -118623143 + L2 LINE L2 3132 3260 -12 366 277 102 91 chr2 134633470 134634214 -118622369 - L2 LINE L2 0 3272 2513 200 265 0 0 chr2 134634597 134634646 -118621937 + MIR3 SINE MIR 109 157 -51 267 79 0 0 chr2 134634854 134634892 -118621691 + (ATTTG)n Simple_repeat Simple_repeat 5 42 0 684 215 65 50 chr2 134635986 134636186 -118620397 + L1MD1 LINE L1 21 223 -6317 582 138 28 0 chr2 134636204 134636313 -118620270 + L1MD1 LINE L1 2485 2596 -3944 * 6060 230 63 33 chr2 134636309 134639587 -118616996 + L1MD1 LINE L1 3251 6636 0 195 319 43 0 chr2 134640428 134640497 -118616086 - L2 LINE L2 -1 3271 3200 434 212 57 73 chr2 134641037 134641176 -118615407 + MLT1H LTR MaLR 405 545 -4 2309 81 0 3 chr2 134641327 134641636 -118614947 - AluY SINE Alu -3 308 1 208 388 51 0 chr2 134642144 134642242 -118614341 + L2 LINE L2 3154 3256 -16 280 267 67 67 chr2 134642274 134642394 -118614189 - L2 LINE L2 -4 3309 3190 364 149 0 68 chr2 134643421 134643495 -118613088 - LTR16C LTR ERVL -15 476 408 332 238 0 62 chr2 134643560 134643609 -118612974 - LTR16C LTR ERVL -223 268 224 1708 200 133 36 chr2 134643609 134644114 -118612469 + MLT2B3 LTR ERVL 1 554 0 332 238 0 62 chr2 134644114 134644144 -118612439 - LTR16C LTR ERVL -267 224 194 351 60 0 0 chr2 134644144 134644194 -118612389 + (TG)n Simple_repeat Simple_repeat 2 51 0 822 89 15 7 chr2 134644365 134644500 -118612083 + (TCTA)n Simple_repeat Simple_repeat 2 137 0 22 0 0 0 chr2 134644584 134644606 -118611977 + AT_rich Low_complexity Low_complexity 1 22 0 878 241 125 81 chr2 134644821 134645612 -118610971 - HAL1 LINE L1 -33 2474 1649 2112 94 3 0 chr2 134645641 134645927 -118610656 + L1PB1 LINE L1 5505 5791 -360 254 131 16 16 chr2 134645932 134645993 -118610590 - LTR66 LTR ERVL -171 439 379 212 122 24 0 chr2 134645993 134646034 -118610549 + (TA)n Simple_repeat Simple_repeat 2 43 0 2649 92 3 3 chr2 134646040 134646409 -118610174 + L1PB1 LINE L1 5782 6150 -1 2060 303 60 19 chr2 134646446 134647460 -118609123 - HAL1 LINE L1 -867 1640 585 353 309 36 22 chr2 134647546 134647685 -118608898 + HAL1 LINE L1 188 328 -2179 1532 188 21 73 chr2 134648434 134648818 -118607765 + MLT1A1 LTR MaLR 2 365 0 2143 123 0 0 chr2 134649305 134649615 -118606968 - AluSg SINE Alu 0 310 1 406 319 22 22 chr2 134649702 134649884 -118606699 - L1ME LINE L1 -400 5721 5540 185 356 127 8 chr2 134650244 134650362 -118606221 - L2 LINE L2 -18 3254 3123 232 273 156 0 chr2 134650503 134650580 -118606003 - MIR SINE MIR -66 196 108 1406 88 73 15 chr2 134651450 134651654 -118604929 + AluSg SINE Alu 1 216 -94 1416 93 0 212 chr2 134651654 134651999 -118604584 + LTR12 LTR ERV1 13 284 -430 237 209 174 0 chr2 134651999 134652085 -118604498 + LTR30 LTR ERV1 552 652 -70 635 158 0 0 chr2 134652088 134652183 -118604400 + LTR12 LTR ERV1 487 581 -133 626 133 0 0 chr2 134652183 134652281 -118604302 + AluSg SINE Alu 204 301 -9 221 318 79 16 chr2 134652314 134652440 -118604143 - L2 LINE L2 0 3272 3139 318 219 14 0 chr2 134652605 134652678 -118603905 - MER116 DNA Mariner 0 80 7 248 301 113 34 chr2 134654907 134655146 -118601437 - L2 LINE L2 -456 2858 2601 226 374 10 0 chr2 134655462 134655561 -118601022 - L2 LINE L2 -784 2530 2431 447 221 19 0 chr2 134656679 134656837 -118599746 + GA-rich Low_complexity Low_complexity 2 162 0 988 110 7 0 chr2 134656838 134656974 -118599609 + AluSp SINE Alu 7 143 -170 1178 78 7 0 chr2 134657077 134657231 -118599352 + AluSp SINE Alu 121 275 -38 188 195 24 24 chr2 134657231 134657313 -118599270 + GA-rich Low_complexity Low_complexity 1 82 0 284 292 0 11 chr2 134657415 134657527 -118599056 - MIR SINE MIR -72 136 28 398 306 19 19 chr2 134657838 134657995 -118598588 - L2 LINE L2 -915 2399 2243 229 237 13 40 chr2 134658100 134658176 -118598407 + MIR SINE MIR 175 248 -14 4418 201 39 20 chr2 134658193 134658309 -118598274 - L1MA9 LINE L1 -28 6284 6172 243 0 0 0 chr2 134658309 134658336 -118598247 + (TG)n Simple_repeat Simple_repeat 1 27 0 4418 201 39 20 chr2 134658336 134659964 -118596619 - L1MA9 LINE L1 -140 6172 4509 321 304 147 60 chr2 134660405 134660807 -118595776 + L2 LINE L2 2836 3272 0 263 331 121 35 chr2 134661991 134662281 -118594302 + L2 LINE L2 2586 2900 -414 918 263 107 43 chr2 134662948 134663367 -118593216 + MLT1J1 LTR MaLR 1 446 0 1815 159 3 0 chr2 134664736 134665026 -118591557 + AluSx SINE Alu 1 291 -21 281 308 0 0 chr2 134665031 134665122 -118591461 + A-rich Low_complexity Low_complexity 1 91 0 562 127 8 71 chr2 134665893 134665972 -118590611 - L1PA15 LINE L1 0 6165 6083 2065 135 72 23 chr2 134665972 134666319 -118590264 + THE1B LTR MaLR 1 364 0 11390 95 26 3 chr2 134666319 134667863 -118588720 + THE1B-int LTR MaLR 1 1580 0 1976 137 84 26 chr2 134667864 134668207 -118588376 + THE1B LTR MaLR 2 364 0 562 127 8 71 chr2 134668207 134668250 -118588333 - L1PA15 LINE L1 -80 6085 6048 733 150 0 38 chr2 134668692 134668825 -118587758 - FRAM SINE Alu -7 169 42 9722 220 31 23 chr2 134668827 134670531 -118586052 - L1P4 LINE L1 -665 5501 3766 1740 171 3 3 chr2 134670531 134670823 -118585760 - AluSx SINE Alu -18 294 3 9722 220 31 23 chr2 134670823 134671897 -118584686 - L1P4 LINE L1 -2400 3766 2701 346 205 26 13 chr2 134673220 134673298 -118583285 - MER117 DNA MER1_type -18 179 101 186 219 109 31 chr2 134673560 134673624 -118582959 - MIR SINE MIR -77 185 117 929 274 59 28 chr2 134676100 134676490 -118580093 + L1MDb LINE L1 818 1219 -5190 1342 128 9 14 chr2 134677905 134678123 -118578460 + LOR1b-int LTR ERV1 4294 4510 -3610 * 3730 133 32 26 chr2 134678120 134678887 -118577696 + LOR1b-int LTR ERV1 4111 5247 -1054 1914 105 29 4 chr2 134678869 134679145 -118577438 + LOR1b-int LTR ERV1 5782 6064 -2056 * 565 132 11 11 chr2 134679144 134679235 -118577348 + LOR1b-int LTR ERV1 8030 8120 0 * 326 98 0 0 chr2 134679235 134679276 -118577307 + LOR1b LTR ERV1 1 41 -420 2140 102 13 33 chr2 134679400 134679705 -118576878 - AluY SINE Alu -12 299 1 3887 68 0 0 chr2 134679705 134680173 -118576410 + L1PA7 LINE L1 5685 6152 -2 639 163 78 0 chr2 134680176 134680305 -118576278 + L1M LINE L1 5279 5417 -763 6038 91 48 2 chr2 134680310 134681171 -118575412 + L1P LINE L1 7 906 -5240 360 164 0 0 chr2 134681396 134681463 -118575120 + (TCCA)n Simple_repeat Simple_repeat 4 70 0 707 209 0 6 chr2 134681483 134681660 -118574923 + (TCCA)n Simple_repeat Simple_repeat 3 178 0 598 237 13 13 chr2 134684500 134684656 -118571927 + L1MC3 LINE L1 7629 7784 -1 628 143 10 10 chr2 134684667 134684765 -118571818 + AluSc SINE Alu 2 99 -210 312 351 33 7 chr2 134684941 134685092 -118571491 - MIR SINE MIR -79 183 29 1649 198 31 25 chr2 134685309 134685535 -118571048 - MER89 LTR ERV1 0 559 329 1674 216 58 6 chr2 134685535 134685882 -118570701 + MLT1A1 LTR MaLR 1 365 0 1649 198 31 25 chr2 134685882 134686014 -118570569 - MER89 LTR ERV1 -230 329 199 304 221 65 0 chr2 134685989 134686066 -118570517 - MER89 LTR ERV1 -470 89 8 * 288 53 0 0 chr2 134686610 134686648 -118569935 + (TA)n Simple_repeat Simple_repeat 1 38 0 226 275 65 58 chr2 134686987 134687047 -118569536 + MER5B DNA MER1_type 3 61 -117 1569 222 61 25 chr2 134687047 134687407 -118569176 - MLT1A2 LTR MaLR -1 373 1 226 275 65 58 chr2 134687407 134687484 -118569099 + MER5B DNA MER1_type 61 141 -37 2282 106 7 0 chr2 134687828 134688130 -118568453 - AluSx SINE Alu -8 304 1 2304 105 3 0 chr2 134688155 134688461 -118568122 + AluY SINE Alu 1 307 -4 266 370 41 7 chr2 134688772 134688918 -118567665 - MIR3 SINE MIR -15 193 43 14751 135 87 39 chr2 134689566 134690402 -118566181 - L1M1 LINE L1 -4099 3466 2672 2175 97 13 17 chr2 134690402 134690700 -118565883 - AluY SINE Alu -14 297 1 14751 135 87 39 chr2 134690700 134692502 -118564081 - L1M1 LINE L1 -4893 2672 701 493 178 42 25 chr2 134692495 134692613 -118563970 - L1M1 LINE L1 -7427 138 19 * 394 267 48 34 chr2 134693221 134693367 -118563216 + MLT1I LTR MaLR 31 178 -231 600 168 0 0 chr2 134693367 134693468 -118563115 - AluSg/x SINE Alu -6 306 206 1725 138 41 22 chr2 134693479 134693798 -118562785 - L1MC3 LINE L1 0 7785 7461 613 204 35 47 chr2 134693792 134693964 -118562619 - L1MA10 LINE L1 -1 6333 6164 * 211 299 45 0 chr2 134694428 134694495 -118562088 - L2 LINE L2 -3 3269 3200 2328 97 7 0 chr2 134695629 134695966 -118560617 - AluSq SINE Alu 0 339 1 191 244 174 12 chr2 134697310 134697396 -118559187 + L2 LINE L2 3172 3271 -1 * 229 212 0 91 chr2 134697390 134697456 -118559127 - MIR SINE MIR -133 75 16 331 310 88 18 chr2 134697912 134698083 -118558500 + L1ME4a LINE L1 5743 5925 -196 1312 190 16 16 chr2 134698146 134698399 -118558184 - AluJo SINE Alu -9 303 51 1541 93 0 0 chr2 134698405 134698599 -118557984 - AluSc SINE Alu -5 304 111 307 217 160 19 chr2 134699495 134699601 -118556982 - L2 LINE L2 0 3313 3193 245 259 75 75 chr2 134699612 134699759 -118556824 - L2 LINE L2 -22 3250 3104 2042 144 0 0 chr2 134700710 134701131 -118555452 + AluSx SINE Alu 14 434 0 1592 92 19 0 chr2 134701700 134701907 -118554676 - AluSq SINE Alu -16 297 87 2774 209 18 24 chr2 134701971 134702522 -118554061 + MER44D DNA MER2_type 3 605 0 319 296 71 10 chr2 134702523 134702621 -118553962 - L2 LINE L2 -23 3249 3146 1613 159 17 14 chr2 134703869 134704158 -118552425 - Tigger1 DNA MER2_type 0 2418 2129 * 4048 169 37 7 chr2 134704146 134704849 -118551734 - Tigger1 DNA MER2_type -1665 753 30 1123 244 15 112 chr2 134704868 134704975 -118551608 - L1ME2 LINE L1 -27 6206 6090 2321 56 3 26 chr2 134704975 134705277 -118551306 + AluY SINE Alu 1 295 -16 1123 244 15 112 chr2 134705277 134705657 -118550926 - L1ME2 LINE L1 -143 6090 5793 2465 73 0 3 chr2 134705657 134705960 -118550623 - AluY SINE Alu -9 302 1 1123 244 15 112 chr2 134705960 134706068 -118550515 - L1ME2 LINE L1 -440 5793 5676 3237 253 56 38 chr2 134706169 134707410 -118549173 - L1ME2 LINE L1 -1807 4408 3145 953 210 48 53 chr2 134707480 134707875 -118548708 - L1ME2 LINE L1 -3610 2605 2213 1271 254 108 33 chr2 134707892 134708440 -118548143 - L1ME2 LINE L1 -4211 2185 1597 2791 254 32 40 chr2 134708443 134709402 -118547181 - L1M4 LINE L1 -756 5390 4439 829 244 26 5 chr2 134709404 134709597 -118546986 + MLT1A1 LTR MaLR 169 365 0 199 275 87 29 chr2 134709670 134709739 -118546844 + MIR SINE MIR 117 189 -73 212 242 257 22 chr2 134711596 134711723 -118544860 - MER5A DNA MER1_type -17 161 18 669 83 41 0 chr2 134713081 134713226 -118543357 + (TA)n Simple_repeat Simple_repeat 1 151 0 2602 70 15 18 chr2 134713249 134713592 -118542991 - L1PA7 LINE L1 -3 6151 5810 1561 179 30 73 chr2 134713596 134713964 -118542619 + MER57A LTR ERV1 36 387 -16 439 144 51 3 chr2 134713965 134714053 -118542530 - L1M3 LINE L1 -523 5893 5804 8807 251 34 20 chr2 134714059 134716970 -118539613 - L1M3 LINE L1 -1005 5377 2421 1839 130 56 0 chr2 134716974 134717275 -118539308 - AluSx SINE Alu 0 316 1 3511 241 75 28 chr2 134717366 134719181 -118537402 - L1M4c LINE L1 -4000 2644 666 2426 63 7 3 chr2 134719183 134719483 -118537100 - AluY SINE Alu -5 306 6 429 106 30 0 chr2 134719586 134719652 -118536931 - Alu SINE Alu -240 69 2 800 283 86 25 chr2 134719657 134719972 -118536611 - L1M4c LINE L1 -5880 662 329 792 255 100 30 chr2 134719980 134720251 -118536332 - L1M4c LINE L1 -6240 302 13 248 211 100 14 chr2 134721866 134721946 -118534637 + MIR SINE MIR 63 153 -55 21 0 0 0 chr2 134722357 134722378 -118534205 + AT_rich Low_complexity Low_complexity 1 21 0 416 282 16 85 chr2 134722911 134723099 -118533484 + MER5B DNA MER1_type 2 176 -2 1872 259 104 6 chr2 134723492 134724022 -118532561 - MLT1E2 LTR MaLR -5 621 40 899 244 37 58 chr2 134724125 134724166 -118532417 - L1ME LINE L1 -552 5614 5574 1949 118 6 37 chr2 134724166 134724487 -118532096 + AluSq SINE Alu 3 313 0 899 244 37 58 chr2 134724487 134724893 -118531690 - L1ME LINE L1 -592 5574 5176 750 196 38 106 chr2 134724894 134725129 -118531454 + L1MA9 LINE L1 5864 6082 -230 1120 135 0 0 chr2 134725129 134725285 -118531298 + AluSg/x SINE Alu 132 323 0 184 28 83 0 chr2 134725285 134725321 -118531262 + (TAA)n Simple_repeat Simple_repeat 2 180 0 837 223 5 19 chr2 134725321 134725527 -118531056 + L1MA9 LINE L1 6071 6273 -39 1521 230 32 9 chr2 134725581 134725924 -118530659 - MLT1A1 LTR MaLR 0 365 15 894 238 60 35 chr2 134725970 134726289 -118530294 - L1ME LINE L1 -1062 5084 4758 1121 219 60 3 chr2 134726307 134726658 -118529925 - L1M4 LINE L1 -846 5300 4930 610 48 0 0 chr2 134726676 134726760 -118529823 + MER2 DNA MER2_type 127 210 -135 2127 113 0 3 chr2 134726831 134727143 -118529440 + AluSq SINE Alu 1 311 0 880 265 39 19 chr2 134727188 134727550 -118529033 - L1M4 LINE L1 -1228 4918 4550 558 342 53 27 chr2 134727548 134728022 -118528561 - L1ME LINE L1 -5493 577 92 * 1068 211 19 101 chr2 134728103 134728245 -118528338 - MER2 DNA MER2_type 0 344 192 2300 75 10 0 chr2 134728245 134728538 -118528045 + AluSx SINE Alu 1 296 -16 1068 211 19 101 chr2 134728538 134728770 -118527813 - MER2 DNA MER2_type -152 192 1 445 266 92 13 chr2 134728782 134729011 -118527572 - L1MEc LINE L1 -3418 2797 2551 237 222 56 74 chr2 134729013 134729052 -118527531 - L1MC2 LINE L1 -1 6343 6305 2431 67 0 0 chr2 134729052 134729349 -118527234 + AluY SINE Alu 1 297 -14 237 222 56 74 chr2 134729349 134729417 -118527166 - L1MC2 LINE L1 -39 6305 6238 259 207 0 0 chr2 134729436 134729494 -118527089 - L1MEc LINE L1 -3786 2429 2372 1260 240 72 34 chr2 134729494 134730091 -118526492 - MLT1E3 LTR MaLR 0 624 27 691 258 47 31 chr2 134730113 134730473 -118526110 - L1MEc LINE L1 -4206 2190 1825 738 217 99 5 chr2 134730491 134730712 -118525871 - MER96B DNA MER1_type? -174 243 2 4890 149 25 17 chr2 134732460 134733210 -118523373 - L1PB3 LINE L1 0 6154 5389 2159 68 11 7 chr2 134733210 134733523 -118523060 - AluY SINE Alu 0 314 1 4890 149 25 17 chr2 134733523 134733899 -118522684 - L1PB3 LINE L1 -765 5389 5017 30591 121 22 17 chr2 134734003 134739611 -118516972 - L1P2 LINE L1 -508 5646 12 1212 175 70 37 chr2 134739624 134739904 -118516679 - L1M4 LINE L1 -850 5296 5000 2041 145 3 0 chr2 134739904 134740228 -118516355 - AluSx SINE Alu 0 312 1 1212 175 70 37 chr2 134740228 134740302 -118516281 - L1M4 LINE L1 -1146 5000 4930 1848 168 35 3 chr2 134740305 134740650 -118515933 + L1MB3 LINE L1 5438 5793 -378 1041 170 28 5 chr2 134740712 134740930 -118515653 + L1MB3 LINE L1 5959 6181 -2 3872 201 21 23 chr2 134740936 134741593 -118514990 + L1MB8 LINE L1 4316 4973 -1205 2355 78 0 3 chr2 134741593 134741889 -118514694 + AluY SINE Alu 16 310 -1 3872 201 21 23 chr2 134741889 134742991 -118513592 + L1MB8 LINE L1 4973 6072 -106 483 167 42 0 chr2 134743049 134743145 -118513438 + L1MB7 LINE L1 6076 6175 -9 22 0 0 0 chr2 134744034 134744056 -118512527 + AT_rich Low_complexity Low_complexity 1 22 0 186 355 65 40 chr2 134745698 134745822 -118510761 + L2 LINE L2 3145 3271 -1 315 203 96 35 chr2 134746389 134746540 -118510043 + MIR SINE MIR 1 160 -63 222 256 61 12 chr2 134746804 134746968 -118509615 + (TA)n Simple_repeat Simple_repeat 1 172 0 256 150 0 0 chr2 134747360 134747400 -118509183 - L1MC1 LINE L1 -232 6101 6062 531 244 0 3 chr2 134747801 134748383 -118508200 + (TG)n Simple_repeat Simple_repeat 1 579 0 534 222 0 0 chr2 134748409 134748576 -118508007 + (TG)n Simple_repeat Simple_repeat 1 167 0 200 277 0 0 chr2 134748588 134748635 -118507948 + (TG)n Simple_repeat Simple_repeat 2 48 0 194 296 23 45 chr2 134750725 134750813 -118505770 - MIR SINE MIR -84 124 39 316 297 60 58 chr2 134754590 134754970 -118501613 + MER89-int LTR ERV1 3686 4066 -4360 314 342 52 37 chr2 134755050 134755658 -118500925 + MER89-int LTR ERV1 3377 4984 -2772 666 181 0 16 chr2 134755700 134755827 -118500756 + LTR24 LTR ERV1 343 467 0 58 54 0 0 chr2 134756105 134756198 -118500385 + AT_rich Low_complexity Low_complexity 1 93 0 502 203 74 41 chr2 134756726 134756938 -118499645 + LTR45B LTR ERV1 331 489 0 230 310 0 0 chr2 134756991 134757078 -118499505 - L1ME LINE L1 -5946 124 38 297 194 20 15 chr2 134757139 134757220 -118499363 - L1ME LINE L1 -434 5728 5646 1154 287 116 26 chr2 134757294 134758525 -118498058 - L1ME LINE L1 -524 5638 4297 473 278 124 37 chr2 134758977 134759961 -118496622 - L1ME LINE L1 -1857 4289 3086 4803 146 29 29 chr2 134760309 134761212 -118495371 + MER4D LTR ERV1 1 903 0 733 237 98 36 chr2 134761249 134761669 -118494914 - L1ME LINE L1 -562 5600 5160 199 349 47 23 chr2 134761828 134761957 -118494626 - MIR SINE MIR -9 253 122 2429 98 3 0 chr2 134762413 134762720 -118493863 - AluSp SINE Alu -5 308 1 231 208 14 56 chr2 134763135 134763207 -118493376 + L2 LINE L2 2225 2293 -1021 219 69 0 0 chr2 134763618 134763647 -118492936 + (T)n Simple_repeat Simple_repeat 1 29 0 860 238 34 19 chr2 134764311 134764517 -118492066 - MIR SINE MIR -46 216 8 1050 154 63 144 chr2 134764762 134765159 -118491424 - LTR49 LTR ERV1 -230 365 1 1168 154 23 5 chr2 134766008 134766222 -118490361 + L1MA8 LINE L1 6071 6288 -3 488 290 0 0 chr2 134766244 134766375 -118490208 - L1MB7 LINE L1 -57 6127 5997 363 198 138 9 chr2 134766375 134766491 -118490092 - L1MB7 LINE L1 -408 5776 5646 426 147 13 0 chr2 134766493 134766566 -118490017 + MER57A LTR ERV1 8 81 -322 1526 177 83 27 chr2 134766566 134767029 -118489554 - LTR29 LTR ERV1 0 608 139 780 81 37 0 chr2 134767098 134767259 -118489324 + (TA)n Simple_repeat Simple_repeat 2 168 0 505 161 11 0 chr2 134767362 134767449 -118489134 - AluSg/x SINE Alu -15 294 207 9934 147 34 6 chr2 134767449 134770498 -118486085 - L1PBa LINE L1 -2423 4439 1307 399 119 0 0 chr2 134770502 134770627 -118485956 - L1PBa LINE L1 -5701 1162 995 306 229 0 0 chr2 134770627 134770697 -118485886 - L1PBa LINE L1 -6669 194 125 36 0 0 0 chr2 134770708 134770744 -118485839 + AT_rich Low_complexity Low_complexity 1 36 0 4550 200 70 13 chr2 134770744 134772324 -118484259 - L1PBa LINE L1 -3785 3077 1403 501 274 7 0 chr2 134772362 134772515 -118484068 - L1PBa LINE L1 -6707 156 3 893 258 17 43 chr2 134772722 134773021 -118483562 + L1MC4 LINE L1 6704 6994 -1048 400 276 64 31 chr2 134773443 134773962 -118482621 + L1MC5 LINE L1 7268 7711 -250 2281 78 7 0 chr2 134774500 134774783 -118481800 + AluY SINE Alu 1 285 -26 2941 137 51 2 chr2 134774805 134775279 -118481304 + LOR1a LTR ERV1 1 497 0 1861 177 36 3 chr2 134775279 134775640 -118480943 + LOR1a-int LTR ERV1 1 373 -7747 15252 109 43 13 chr2 134775654 134779138 -118477445 + LOR1-int LTR ERV1 206 3836 -4284 3068 143 4 2 chr2 134779240 134779716 -118476867 + LOR1a LTR ERV1 21 497 0 281 248 184 21 chr2 134779788 134779929 -118476654 + MLT1J2 LTR MaLR 45 208 -242 250 237 79 13 chr2 134780014 134780090 -118476493 + MLT1I LTR MaLR 327 407 -2 1673 205 0 9 chr2 134780806 134781138 -118475445 + L1MC3 LINE L1 6420 6748 -1037 4603 257 65 22 chr2 134781196 134784042 -118472541 - L1MEc LINE L1 -2029 4535 1565 1151 265 68 26 chr2 134784035 134784450 -118472133 - L1MEc LINE L1 -5219 826 395 * 1039 301 14 14 chr2 134784451 134784796 -118471787 - L1MEc LINE L1 -5698 347 3 21 0 0 0 chr2 134785005 134785026 -118471557 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 134785400 134785424 -118471159 + AT_rich Low_complexity Low_complexity 1 24 0 1756 245 57 25 chr2 134785888 134786588 -118469995 - L1M4 LINE L1 -3372 3010 2289 1413 142 0 5 chr2 134786588 134786793 -118469790 - AluJb SINE Alu -108 204 1 196 309 65 32 chr2 134786793 134786916 -118469667 + MIR SINE MIR 101 227 -35 259 363 86 25 chr2 134787467 134787792 -118468791 + L2 LINE L2 2632 2976 -338 3683 123 128 2 chr2 134788865 134789476 -118467107 - LTR12 LTR ERV1 0 688 1 412 191 99 48 chr2 134789553 134789825 -118466758 - pTR5 LTR ERV1 -1410 1028 743 5733 142 46 19 chr2 134790260 134791257 -118465326 - L1MA9 LINE L1 -4 6308 5266 216 0 0 0 chr2 134791257 134791281 -118465302 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 5733 142 46 19 chr2 134791281 134791466 -118465117 - L1MA9 LINE L1 -1046 5266 5088 14120 172 20 25 chr2 134791509 134795746 -118460837 - L1MA2 LINE L1 0 7723 3503 3967 193 26 32 chr2 134795883 134796779 -118459804 + L1MB4 LINE L1 5279 6168 -12 3371 243 47 16 chr2 134796790 134797986 -118458597 + L1M4 LINE L1 2272 3504 -2642 5187 162 32 44 chr2 134797990 134799992 -118456591 + L1PB3 LINE L1 4196 6152 -2 23 33 0 0 chr2 134799992 134800022 -118456561 + AT_rich Low_complexity Low_complexity 1 30 0 603 119 10 0 chr2 134800022 134800123 -118456460 + L1 LINE L1 4570 4671 -1475 567 293 45 16 chr2 134800126 134800372 -118456211 + L1M4 LINE L1 3532 3784 -2362 1942 130 23 16 chr2 134800372 134800679 -118455904 + AluSx SINE Alu 1 309 -3 255 91 0 0 chr2 134800679 134800712 -118455871 + (GA)n Simple_repeat Simple_repeat 1 33 0 655 100 23 23 chr2 134800712 134800842 -118455741 + (GGAA)n Simple_repeat Simple_repeat 4 133 0 2043 142 3 0 chr2 134800879 134801188 -118455395 + AluSg SINE Alu 1 310 0 2106 233 70 89 chr2 134801198 134801425 -118455158 + L1M4 LINE L1 3797 4027 -2119 1888 201 49 7 chr2 134801425 134801833 -118454750 + MSTB LTR MaLR 1 425 -1 2106 233 70 89 chr2 134801833 134802257 -118454326 + L1M4 LINE L1 4027 4458 -1688 251 28 28 0 chr2 134802257 134802293 -118454290 + (TA)n Simple_repeat Simple_repeat 2 38 0 2106 233 70 89 chr2 134802293 134802933 -118453650 + L1M4 LINE L1 4458 5064 -1082 2803 68 8 0 chr2 134802980 134803360 -118453223 - L1PA7 LINE L1 -3 6151 5769 34034 47 0 0 chr2 134803360 134808388 -118448195 - L1PA4 LINE L1 -4 6151 1123 2195 109 3 3 chr2 134808490 134808792 -118447791 - AluSq SINE Alu -11 302 1 843 167 25 64 chr2 134808811 134809015 -118447568 + L1MB1 LINE L1 5967 6162 -6 1209 209 121 3 chr2 134809043 134809349 -118447234 - L1MC3 LINE L1 -338 7447 7106 282 244 105 12 chr2 134809390 134809476 -118447107 + MLT1I LTR MaLR 316 409 0 21 0 0 0 chr2 134809587 134809608 -118446975 + AT_rich Low_complexity Low_complexity 1 21 0 390 347 20 7 chr2 134810231 134810378 -118446205 - MIR SINE MIR -107 155 7 231 293 189 42 chr2 134810838 134811050 -118445533 + L2 LINE L2 3026 3268 -4 2576 253 64 32 chr2 134811447 134812624 -118443959 + L1MD3 LINE L1 410 1585 -4821 245 235 59 0 chr2 134812629 134812714 -118443869 + L1MD3 LINE L1 3298 3387 -3019 * 1525 250 39 40 chr2 134812707 134813328 -118443255 + L1MD3 LINE L1 4406 5025 -1381 544 238 44 33 chr2 134813346 134813527 -118443056 + L1MD3 LINE L1 5359 5541 -865 225 333 37 9 chr2 134813823 134813931 -118442652 - L2 LINE L2 0 3313 3203 4568 217 117 101 chr2 134815529 134816044 -118440539 + L1MD3 LINE L1 5802 6307 -1948 751 184 18 24 chr2 134816044 134816212 -118440371 + L1MD2 LINE L1 6193 6359 0 4568 217 117 101 chr2 134816212 134817408 -118439175 + L1MD3 LINE L1 6307 7680 -575 563 223 0 8 chr2 134817408 134817529 -118439054 + MLT1F1 LTR MaLR 6 125 -442 4568 217 117 101 chr2 134817529 134817983 -118438600 + L1MD3 LINE L1 7680 8125 -130 1160 223 65 24 chr2 134817975 134818255 -118438328 + L1ME2 LINE L1 5132 5433 -733 * 6902 199 126 12 chr2 134818255 134819830 -118436753 + MER52A LTR ERV1 1 1754 -1 1160 223 65 24 chr2 134819830 134820070 -118436513 + L1ME2 LINE L1 5433 5662 -504 647 226 42 49 chr2 134820072 134820360 -118436223 + L1ME2 LINE L1 5879 6164 0 2080 145 0 0 chr2 134820442 134820746 -118435837 + AluSx SINE Alu 4 307 -5 3000 254 56 38 chr2 134822084 134823344 -118433239 - L1MEc LINE L1 -1788 4427 3145 886 218 46 51 chr2 134823414 134823809 -118432774 - L1MEc LINE L1 -3610 2605 2213 1172 254 108 33 chr2 134823826 134824374 -118432209 - L1MEc LINE L1 -4211 2185 1597 4808 263 52 26 chr2 134824377 134827580 -118429003 - L1MDa LINE L1 -756 5784 867 334 232 11 177 chr2 134827580 134827761 -118428822 - L1MDa LINE L1 -6211 510 360 1834 210 19 11 chr2 134828744 134829106 -118427477 + MLT1A1 LTR MaLR 1 365 0 199 275 87 29 chr2 134829179 134829248 -118427335 + MIR SINE MIR 117 189 -73 180 0 0 0 chr2 134830946 134830966 -118425617 + (A)n Simple_repeat Simple_repeat 1 20 0 1285 170 5 5 chr2 134831254 134831472 -118425111 - AluSg/x SINE Alu -5 307 90 381 287 20 14 chr2 134831662 134831815 -118424768 + L1ME3A LINE L1 5452 5602 -574 339 230 80 53 chr2 134831816 134831929 -118424654 + L1ME3A LINE L1 5769 5884 -286 461 324 17 6 chr2 134832639 134832815 -118423768 + MIR SINE MIR 72 249 -13 203 277 0 43 chr2 134833236 134833330 -118423253 + CT-rich Low_complexity Low_complexity 4 93 0 22 70 0 0 chr2 134835057 134835100 -118421483 + GC_rich Low_complexity Low_complexity 1 43 0 2073 110 10 3 chr2 134836356 134836655 -118419928 - AluSp SINE Alu -12 301 1 3162 186 31 58 chr2 134836655 134837581 -118419002 + L1MC3 LINE L1 6716 7778 -7 366 290 37 56 chr2 134837634 134837903 -118418680 + L1M4 LINE L1 4083 4346 -1800 227 239 33 0 chr2 134837914 134838006 -118418577 + (TA)n Simple_repeat Simple_repeat 1 95 0 742 235 174 27 chr2 134838327 134838621 -118417962 - MLT1E LTR MaLR -256 337 1 349 71 0 0 chr2 134838699 134838741 -118417842 - L1P4 LINE L1 -572 5596 5555 3389 52 15 0 chr2 134838741 134839144 -118417439 + L1PA8 LINE L1 5759 6169 -3 1301 183 24 29 chr2 134839244 134839696 -118416887 - L1MC/D LINE L1 -717 5594 5137 2034 249 70 63 chr2 134839711 134840817 -118415766 - L1MC/D LINE L1 -2052 4163 3051 * 2409 289 78 37 chr2 134840810 134843455 -118413128 - L1MEc LINE L1 -3401 2814 95 753 149 9 9 chr2 134844294 134844408 -118412175 + AluSq/x SINE Alu 2 115 -198 188 354 0 0 chr2 134844576 134844624 -118411959 + L2 LINE L2 3210 3257 -15 868 283 140 36 chr2 134845554 134846131 -118410452 - MLT2F LTR ERVL 0 663 27 229 236 0 18 chr2 134847068 134847123 -118409460 - L2 LINE L2 0 3272 3219 1660 219 65 91 chr2 134847168 134847783 -118408800 - MER77 LTR ERV1 -2 603 5 1187 178 70 12 chr2 134848122 134848370 -118408213 + MLT1C LTR MaLR 205 542 0 244 317 75 17 chr2 134849304 134849424 -118407159 - L2 LINE L2 -5 3267 3141 2172 115 6 13 chr2 134849748 134850062 -118406521 - AluSx SINE Alu 0 312 1 304 211 74 19 chr2 134851142 134851271 -118405312 - LTR50 LTR ERVL -88 641 298 368 377 183 6 chr2 134851544 134851889 -118404694 + L2 LINE L2 2867 3272 0 376 296 143 8 chr2 134852464 134852716 -118403867 + MLT1H LTR MaLR 240 577 -13 587 279 58 42 chr2 134852745 134852816 -118403767 + L1MC3 LINE L1 2781 2849 -3297 2228 90 4 0 chr2 134852816 134853095 -118403488 + AluSq SINE Alu 17 296 -17 587 279 58 42 chr2 134853095 134853444 -118403139 + L1MC3 LINE L1 2849 3213 -2933 2796 137 63 9 chr2 134853444 134853904 -118402679 + MER31A LTR ERV1 1 485 0 587 279 58 42 chr2 134853904 134854002 -118402581 + L1MC3 LINE L1 3213 3308 -2838 335 296 84 36 chr2 134854202 134854510 -118402073 + L1MC3 LINE L1 3702 4024 -2122 * 5639 194 40 48 chr2 134854489 134854630 -118401953 + L1MC3 LINE L1 5257 5398 -2387 2143 121 7 0 chr2 134854630 134854928 -118401655 + AluSq SINE Alu 1 300 -13 5639 194 40 48 chr2 134854928 134856218 -118400365 + L1MC3 LINE L1 5398 6677 -1108 770 219 118 5 chr2 134857561 134857748 -118398835 - MLT1D LTR MaLR -8 497 290 2308 109 0 6 chr2 134858391 134858703 -118397880 + AluSx SINE Alu 1 310 -2 319 203 43 80 chr2 134859190 134859328 -118397255 + L1MDa LINE L1 1237 1369 -5171 378 326 124 15 chr2 134859343 134859648 -118396935 + L1MDa LINE L1 1422 1751 -4789 321 272 28 50 chr2 134859685 134859865 -118396718 + L1ME LINE L1 51 226 -5844 1038 276 32 45 chr2 134860182 134860718 -118395865 + L1ME LINE L1 540 1068 -5002 859 214 107 107 chr2 134860861 134860927 -118395656 + L1MC5 LINE L1 7323 7388 -573 2051 117 0 3 chr2 134860927 134861209 -118395374 + AluSg SINE Alu 5 285 -25 859 214 107 107 chr2 134861209 134861638 -118394945 + L1MC5 LINE L1 7387 7818 -143 2816 265 68 48 chr2 134861652 134861966 -118394617 - L1M4 LINE L1 -1176 5468 5162 2270 93 0 10 chr2 134861966 134862279 -118394304 - AluSx SINE Alu -2 310 1 2816 265 68 48 chr2 134862279 134863086 -118393497 - L1M4 LINE L1 -1482 5162 14 22 0 0 0 chr2 134864604 134864626 -118391957 + AT_rich Low_complexity Low_complexity 1 22 0 435 343 34 25 chr2 134864870 134865106 -118391477 + L1MB5 LINE L1 301 538 -6321 * 2066 241 64 51 chr2 134865102 134865688 -118390895 + L1MB5 LINE L1 1130 1707 -5252 2135 130 0 0 chr2 134865688 134865981 -118390602 + AluSg SINE Alu 15 307 -3 2066 241 64 51 chr2 134865981 134866658 -118389925 + L1MB5 LINE L1 1707 2401 -4558 2633 223 106 93 chr2 134866766 134866986 -118389597 + L1MB5 LINE L1 4225 4441 -2516 2779 10 0 0 chr2 134866986 134867284 -118389299 + AluYa5 SINE Alu 1 298 -13 2633 223 106 93 chr2 134867284 134868348 -118388235 + L1MB5 LINE L1 4441 5525 -1432 2537 48 6 42 chr2 134868414 134868745 -118387838 + L1PA7 LINE L1 5836 6154 0 260 290 43 51 chr2 134869225 134869363 -118387220 + L1ME2 LINE L1 545 681 -5703 1567 155 18 18 chr2 134869393 134869677 -118386906 + L1MB4 LINE L1 5896 6179 -1 483 307 0 12 chr2 134869684 134869847 -118386736 + L1ME2 LINE L1 4936 5096 -1286 2454 235 73 42 chr2 134869851 134869971 -118386612 + L1ME2 LINE L1 5245 5360 -1040 2478 159 41 22 chr2 134869971 134870387 -118386196 + MSTB LTR MaLR 1 424 -2 2454 235 73 42 chr2 134870387 134871376 -118385207 + L1ME2 LINE L1 5360 6390 -10 2093 184 30 78 chr2 134871760 134872299 -118384284 + L1MB5 LINE L1 6129 6641 -344 1469 203 47 41 chr2 134872299 134872639 -118383944 - MLT2D LTR ERVL 0 414 73 1537 172 77 0 chr2 134872690 134872975 -118383608 + L1MB5 LINE L1 6643 6949 -36 * 1993 153 13 65 chr2 134872971 134873357 -118383226 + L1MB3 LINE L1 5426 5791 -392 752 258 36 27 chr2 134873534 134873759 -118382824 - MIR SINE MIR 0 262 36 1700 190 68 5 chr2 134873865 134874234 -118382349 + L1MB3 LINE L1 5791 6182 -1 241 274 74 67 chr2 134874337 134874472 -118382111 + MIR SINE MIR 13 148 -114 212 259 19 0 chr2 134874549 134874603 -118381980 + (CACCAT)n Simple_repeat Simple_repeat 5 59 0 818 252 26 22 chr2 134875241 134875471 -118381112 + MIR SINE MIR 32 262 0 2113 110 4 0 chr2 134875686 134875990 -118380593 - AluSg SINE Alu 0 305 1 359 292 18 30 chr2 134876312 134876480 -118380103 - MER103 DNA DNA 0 166 1 282 95 0 0 chr2 134877342 134877384 -118379199 + (TGGA)n Simple_repeat Simple_repeat 1 42 0 245 330 65 3 chr2 134878843 134879013 -118377570 + MIR SINE MIR 64 250 -12 723 223 169 65 chr2 134879648 134880016 -118376567 + MLT1G3 LTR MaLR 78 510 -32 1015 259 119 57 chr2 134880295 134880875 -118375708 - MER21B LTR ERV1 -150 713 98 244 276 75 60 chr2 134880845 134880979 -118375604 - MER77 LTR ERV1 -404 201 66 * 2073 125 3 0 chr2 134881004 134881293 -118375290 + AluSc SINE Alu 14 303 -6 186 377 123 8 chr2 134881628 134881750 -118374833 + MIR SINE MIR 112 247 -15 219 331 39 58 chr2 134881783 134881955 -118374628 + MIR SINE MIR 8 175 -87 1964 121 7 3 chr2 134881955 134882237 -118374346 - AluSp SINE Alu -30 283 1 219 331 39 58 chr2 134882237 134882324 -118374259 + MIR SINE MIR 175 262 0 6095 65 4 4 chr2 134882617 134883352 -118373231 + L1PA7 LINE L1 5420 6154 0 222 284 90 0 chr2 134883958 134884025 -118372558 - MIR SINE MIR -98 164 92 522 0 0 0 chr2 134884071 134884129 -118372454 + (CA)n Simple_repeat Simple_repeat 1 58 0 873 249 132 47 chr2 134884803 134885294 -118371289 + MLT1F1 LTR MaLR 3 535 -32 1395 238 35 45 chr2 134885924 134886436 -118370147 + L1ME2 LINE L1 5645 6151 -13 227 324 27 27 chr2 134886480 134886628 -118369955 + L1MC4 LINE L1 7830 7977 -65 832 246 95 29 chr2 134886629 134886999 -118369584 + MSTC LTR MaLR 1 428 0 4061 234 90 93 chr2 134887001 134888727 -118367856 + MSTD-int LTR MaLR 2 1722 -13 854 214 127 82 chr2 134888738 134889089 -118367494 + MSTD LTR MaLR 1 396 0 2040 127 0 3 chr2 134889253 134889536 -118367047 - AluSx SINE Alu -30 282 1 21 0 0 0 chr2 134892081 134892102 -118364481 + AT_rich Low_complexity Low_complexity 1 21 0 276 310 60 0 chr2 134892211 134892327 -118364256 - L1ME LINE L1 -366 5804 5682 799 173 96 41 chr2 134892360 134892557 -118364026 - MER3 DNA MER1_type 0 209 2 410 292 195 4 chr2 134892557 134892793 -118363790 - L1M4 LINE L1 -2932 3214 2934 220 314 29 20 chr2 134892798 134892900 -118363683 - L2 LINE L2 -4 3309 3207 776 180 3 48 chr2 134893080 134894110 -118362473 + BSR/Beta Satellite Satellite 1 984 0 383 277 153 15 chr2 134895708 134896080 -118360503 - MLT1L LTR MaLR -8 607 112 206 224 37 104 chr2 134896565 134896699 -118359884 + L2 LINE L2 1658 1782 -1532 2062 199 31 6 chr2 134897166 134897724 -118358859 + L1MC3 LINE L1 4862 5436 -743 871 189 97 14 chr2 134897724 134897979 -118358604 + L1MC3 LINE L1 6037 7785 0 501 254 77 18 chr2 134898689 134898858 -118357725 + MLT1J2 LTR MaLR 16 194 -256 2081 125 6 16 chr2 134899256 134899569 -118357014 - AluSx SINE Alu -2 310 1 405 246 65 89 chr2 134899611 134900117 -118356466 + L1MEc LINE L1 853 1326 -4889 1516 246 37 5 chr2 134900124 134900502 -118356081 - MLT1E2 LTR MaLR -7 619 230 1101 251 80 9 chr2 134900514 134900840 -118355743 - MLT1-int LTR MaLR -985 386 38 193 312 75 15 chr2 134901166 134901285 -118355298 + MIR SINE MIR 3 137 -71 1908 147 0 29 chr2 134901402 134901738 -118354845 + AluSg SINE Alu 1 310 0 274 250 0 15 chr2 134902234 134902302 -118354281 + LTR16C LTR ERVL 415 481 -10 202 296 11 34 chr2 134902774 134902862 -118353721 + MIR SINE MIR 157 242 -20 * 212 175 0 0 chr2 134902828 134902868 -118353715 + L2 LINE L2 3213 3252 -20 308 292 19 25 chr2 134905234 134905395 -118351188 + (CCCA)n Simple_repeat Simple_repeat 3 162 0 609 226 0 7 chr2 134905425 134906020 -118350563 + (CCCA)n Simple_repeat Simple_repeat 1 591 0 312 284 0 0 chr2 134906051 134906213 -118350370 + (CCCA)n Simple_repeat Simple_repeat 4 165 0 392 247 6 0 chr2 134906265 134906435 -118350148 + (CCCA)n Simple_repeat Simple_repeat 3 173 0 323 283 0 6 chr2 134906490 134906832 -118349751 + (CCCA)n Simple_repeat Simple_repeat 1 340 0 211 292 46 0 chr2 134907362 134907427 -118349156 + MIR3 SINE MIR 116 183 -25 214 185 19 56 chr2 134907483 134907537 -118349046 - MIR SINE MIR -113 149 98 268 378 120 23 chr2 134908353 134908612 -118347971 - L2 LINE L2 -2 3270 2987 204 361 49 35 chr2 134909132 134909276 -118347307 - L2 LINE L2 -900 2414 2269 237 310 37 27 chr2 134910224 134910411 -118346172 - L1ME LINE L1 -260 5861 5673 810 255 105 6 chr2 134910462 134910541 -118346042 + LTR37A LTR ERV1 39 109 -317 2360 81 3 3 chr2 134910541 134910836 -118345747 + AluY SINE Alu 2 296 -15 810 255 105 6 chr2 134910836 134911109 -118345474 + LTR37A LTR ERV1 109 426 0 416 309 42 34 chr2 134911109 134911374 -118345209 - L1ME LINE L1 -462 5659 5393 309 283 35 48 chr2 134911763 134911908 -118344675 - L1ME LINE L1 -2586 5409 5267 187 234 26 0 chr2 134911966 134912043 -118344540 + (TA)n Simple_repeat Simple_repeat 2 80 0 305 259 12 0 chr2 134912911 134912996 -118343587 + MLT1I LTR MaLR 81 166 -243 262 226 36 24 chr2 134913042 134913126 -118343457 + MLT1I LTR MaLR 315 399 -10 311 350 20 0 chr2 134913912 134914012 -118342571 + MIR SINE MIR 41 142 -66 489 272 69 60 chr2 134914991 134915223 -118341360 + MIR SINE MIR 21 254 -8 256 220 84 75 chr2 134916156 134916291 -118340292 + MIR SINE MIR 18 152 -67 23 33 0 0 chr2 134916588 134916618 -118339965 + AT_rich Low_complexity Low_complexity 1 30 0 13024 228 45 23 chr2 134916622 134919254 -118337329 + L1MA9 LINE L1 2 2575 -3801 1879 201 40 3 chr2 134919254 134919603 -118336980 + MLT1A1 LTR MaLR 2 363 -2 13024 228 45 23 chr2 134919603 134921314 -118335269 + L1MA9 LINE L1 2575 4247 -2129 2231 109 3 7 chr2 134921314 134921617 -118334966 + AluSx SINE Alu 1 302 -10 13024 228 45 23 chr2 134921617 134923683 -118332900 + L1MA9 LINE L1 4247 6343 -33 29 0 0 0 chr2 134923690 134923719 -118332864 + AT_rich Low_complexity Low_complexity 1 29 0 826 258 191 26 chr2 134924737 134925082 -118331501 + MLT2F LTR ERVL 245 646 -17 848 211 28 70 chr2 134926136 134926349 -118330234 + MER63A DNA MER1_type 2 205 -5 286 258 204 45 chr2 134926964 134927096 -118329487 + MIR SINE MIR 3 155 -107 1596 175 110 20 chr2 134928053 134928408 -118328175 + LTR16A1 LTR ERVL 60 446 -11 206 323 129 0 chr2 134928500 134928593 -118327990 - L2 LINE L2 0 3272 3168 181 217 14 14 chr2 134929113 134929182 -118327401 + GA-rich Low_complexity Low_complexity 2 70 0 239 176 15 103 chr2 134930138 134930179 -118326404 + L2 LINE L2 3204 3238 -34 1925 171 48 66 chr2 134930179 134930619 -118325964 - MSTB1 LTR MaLR 0 432 1 239 176 15 103 chr2 134930619 134930645 -118325938 + L2 LINE L2 3238 3265 -7 342 281 23 62 chr2 134930792 134930920 -118325663 + MIR SINE MIR 28 150 -112 314 340 48 0 chr2 134931026 134931173 -118325410 + L3 LINE CR1 1245 1398 -179 289 77 0 0 chr2 134931306 134931345 -118325238 - L1PA2 LINE L1 -7 6148 6110 276 11 11 0 chr2 134931334 134931374 -118325209 + L1PA4 LINE L1 5949 5991 -164 * 461 324 17 6 chr2 134932030 134932206 -118324377 - MIR SINE MIR -13 249 72 339 230 80 53 chr2 134932914 134933027 -118323556 - L1ME3A LINE L1 -286 5884 5769 538 262 19 6 chr2 134933028 134933195 -118323388 - L1ME3A LINE L1 -574 5596 5437 454 300 34 38 chr2 134933195 134933592 -118322991 - MLT1H1 LTR MaLR 0 555 115 273 304 18 18 chr2 134933625 134933737 -118322846 - MLT1H1 LTR MaLR -436 113 2 335 221 29 10 chr2 134933742 134933846 -118322737 - L1P4 LINE L1 -729 5437 5332 1230 265 60 51 chr2 134933856 134934034 -118322549 - L1ME3A LINE L1 -860 5286 5111 2126 116 3 0 chr2 134934034 134934327 -118322256 + AluSx SINE Alu 1 294 -18 1230 265 60 51 chr2 134934327 134935012 -118321571 - L1ME3A LINE L1 -1035 5111 4415 4029 229 56 29 chr2 134935031 134935877 -118320706 - L1MD2 LINE L1 -17 6411 5539 2303 91 0 7 chr2 134935877 134936175 -118320408 - AluY SINE Alu -15 296 1 4029 229 56 29 chr2 134936175 134936535 -118320048 - L1MD2 LINE L1 -889 5539 5190 241 216 164 12 chr2 134936531 134936702 -118319881 - L1MD2 LINE L1 -4080 2316 2120 * 6961 66 14 0 chr2 134936773 134937840 -118318743 - L1PA8A LINE L1 -14 6117 5047 3065 135 16 25 chr2 134937840 134938279 -118318304 + L1P LINE L1 2790 3224 -2922 185 0 40 0 chr2 134938279 134938304 -118318279 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 3065 135 16 25 chr2 134938304 134938419 -118318164 + L1P LINE L1 3224 3339 -2807 293 302 107 27 chr2 134938481 134938779 -118317804 - L1MD2 LINE L1 -4411 1985 1664 582 99 0 0 chr2 134939670 134939761 -118316822 + (TA)n Simple_repeat Simple_repeat 2 92 0 1381 100 0 147 chr2 134939761 134939876 -118316707 - AluSg/x SINE Alu -20 289 231 7823 38 14 3 chr2 134939876 134940994 -118315589 - L1PA4 LINE L1 -3 6152 5030 1381 100 0 147 chr2 134940994 134941137 -118315446 - AluSg/x SINE Alu -78 231 69 33 66 0 0 chr2 134941241 134941302 -118315281 + AT_rich Low_complexity Low_complexity 1 61 0 2085 269 90 10 chr2 134943815 134944525 -118312058 + L1ME3A LINE L1 5404 6170 0 * 3708 45 4 0 chr2 134944523 134944988 -118311595 + L1P LINE L1 2210 2676 -3470 3317 29 8 0 chr2 134944972 134945355 -118311228 + L1PA5 LINE L1 5736 6121 -33 * 396 0 0 0 chr2 134945355 134945399 -118311184 + (TA)n Simple_repeat Simple_repeat 1 44 0 200 200 0 0 chr2 134945428 134945463 -118311120 + (TG)n Simple_repeat Simple_repeat 1 35 0 266 297 0 27 chr2 134946011 134946085 -118310498 - L2 LINE L2 -1 3271 3200 458 251 189 31 chr2 134946270 134946561 -118310022 - MLT1J LTR MaLR -78 433 97 1444 280 57 56 chr2 134946607 134947253 -118309330 - MLT2F LTR ERVL 0 663 17 244 243 79 56 chr2 134947645 134947781 -118308802 - MLT1L LTR MaLR -3 611 363 587 269 96 15 chr2 134947817 134948077 -118308506 - LTR16A LTR ERVL 0 450 170 185 244 22 0 chr2 134948832 134948877 -118307706 - L2 LINE L2 0 3313 3268 189 0 0 0 chr2 134949700 134949721 -118306862 + (CA)n Simple_repeat Simple_repeat 1 21 0 345 290 9 0 chr2 134950812 134950919 -118305664 - LTR16A LTR ERVL 0 450 343 1082 287 71 6 chr2 134953255 134953607 -118302976 - L1ME2 LINE L1 -9 6155 5781 248 191 21 0 chr2 134953650 134953697 -118302886 - L1ME2 LINE L1 -376 5790 5743 4883 208 102 78 chr2 134953981 134954244 -118302339 + L1MD1 LINE L1 26 281 -6259 1963 105 0 11 chr2 134954244 134954510 -118302073 + AluSx SINE Alu 1 263 -49 4883 208 102 78 chr2 134954510 134955964 -118300619 + L1MD1 LINE L1 281 1784 -4756 2941 260 52 16 chr2 134955966 134957017 -118299566 + L1MD1 LINE L1 4106 5194 -1346 958 280 7 0 chr2 134957019 134957305 -118299278 - L1M4 LINE L1 -3245 2901 2614 4093 219 32 36 chr2 134957312 134958709 -118297874 + L1MD1 LINE L1 5243 6636 0 231 184 92 51 chr2 134958789 134958887 -118297696 - L1MA7 LINE L1 0 6291 6190 446 300 6 22 chr2 134959527 134959707 -118296876 + (TGG)n Simple_repeat Simple_repeat 3 179 0 213 178 0 0 chr2 134959766 134959811 -118296772 + (TGG)n Simple_repeat Simple_repeat 3 47 0 345 362 0 0 chr2 134959822 134959974 -118296609 + (TGG)n Simple_repeat Simple_repeat 2 153 0 287 265 0 22 chr2 134960067 134960440 -118296143 + (TGG)n Simple_repeat Simple_repeat 1 364 0 196 365 0 0 chr2 134961270 134961333 -118295250 - MIR SINE MIR -92 116 54 281 284 201 58 chr2 134961592 134962021 -118294562 + HAL1b LINE L1 801 1290 -58 546 257 29 23 chr2 134962510 134962681 -118293902 + L1MDa LINE L1 5 176 -6364 2687 188 85 50 chr2 134962694 134963469 -118293114 + L1MDa LINE L1 902 1703 -4837 1341 258 78 15 chr2 134963478 134964083 -118292500 + L1MDa LINE L1 2778 3420 -3120 2333 234 110 16 chr2 134965754 134966383 -118290200 - MER76 LTR ERV 0 688 1 2846 241 122 44 chr2 134966385 134967730 -118288853 + L1MDa LINE L1 3479 4928 -1612 1497 220 29 24 chr2 134967719 134967753 -118288830 + L1MDa LINE L1 5529 5561 -1075 * 2365 65 14 0 chr2 134967753 134968043 -118288540 + AluY SINE Alu 1 294 -17 1497 220 29 24 chr2 134968043 134968477 -118288106 + L1MDa LINE L1 5561 5998 -638 5691 146 87 26 chr2 134969149 134970283 -118286300 - MER52C LTR ERV1 -67 1211 8 325 203 16 0 chr2 134970635 134970699 -118285884 + L2 LINE L2 3247 3311 -2 366 289 63 67 chr2 134970731 134970984 -118285599 + HAL1 LINE L1 920 1171 -1336 301 293 20 10 chr2 134971106 134971205 -118285378 + (CA)n Simple_repeat Simple_repeat 1 100 0 594 208 107 19 chr2 134971431 134971590 -118284993 + MLT1C LTR MaLR 94 266 -201 1482 244 82 52 chr2 134971819 134972434 -118284149 + L1ME3 LINE L1 4926 5521 -641 1621 195 25 64 chr2 134972434 134972840 -118283743 - MLT1B LTR MaLR 0 390 1 1482 244 82 52 chr2 134972840 134973378 -118283205 + L1ME3 LINE L1 5521 6151 -11 233 241 0 0 chr2 134973717 134973771 -118282812 + (TA)n Simple_repeat Simple_repeat 1 54 0 226 150 0 0 chr2 134973776 134973816 -118282767 - LTR66 LTR ERVL -172 438 399 2524 211 11 13 chr2 134973817 134974292 -118282291 - MLT2B2 LTR ERVL -40 475 2 438 309 32 44 chr2 134975050 134975299 -118281284 + LTR33 LTR ERVL 3 248 -273 432 303 23 23 chr2 134975653 134975785 -118280798 + L2 LINE L2 3182 3313 0 1000 143 43 0 chr2 134975927 134976088 -118280495 + L1MD3 LINE L1 7103 7270 -725 540 205 9 9 chr2 134976093 134976205 -118280378 + MLT1F1 LTR MaLR 1 112 -455 538 244 77 18 chr2 134976229 134976397 -118280186 - MER20 DNA MER1_type -41 178 1 1501 175 74 30 chr2 134976447 134976744 -118279839 + AluJb SINE Alu 1 310 -2 1790 228 100 25 chr2 134976745 134977297 -118279286 + L1MD3 LINE L1 7388 7980 -15 21 71 0 0 chr2 134978501 134978543 -118278040 + AT_rich Low_complexity Low_complexity 1 42 0 271 338 68 8 chr2 134978584 134978850 -118277733 + L1ME LINE L1 5111 5392 -754 27 29 0 0 chr2 134978855 134978889 -118277694 + AT_rich Low_complexity Low_complexity 1 34 0 225 280 65 9 chr2 134979033 134979140 -118277443 + L1ME LINE L1 5540 5652 -469 4592 165 9 10 chr2 134979212 134980023 -118276560 + L1MA8 LINE L1 5301 6110 -181 247 250 0 0 chr2 134980023 134980075 -118276508 + LTR30 LTR ERV1 1 52 -670 890 121 78 168 chr2 134980075 134980331 -118276252 + LTR12 LTR ERV1 53 285 -429 230 292 0 0 chr2 134980332 134980404 -118276179 + LTR30 LTR ERV1 553 624 -98 615 150 31 71 chr2 134980404 134980531 -118276052 + LTR12 LTR ERV1 359 480 -234 753 216 40 0 chr2 134980532 134980708 -118275875 + L1MA8 LINE L1 6107 6289 -2 1204 249 96 33 chr2 134981579 134981823 -118274760 + Charlie1b DNA MER1_type 2 229 -2532 2276 80 17 7 chr2 134981823 134982122 -118274461 + AluSc SINE Alu 1 302 -7 1204 249 96 33 chr2 134982122 134982368 -118274215 + Charlie1b DNA MER1_type 229 523 0 31 58 0 0 chr2 134982835 134982887 -118273696 + AT_rich Low_complexity Low_complexity 1 52 0 2339 65 0 4 chr2 134982960 134983239 -118273344 - AluY SINE Alu -11 300 23 482 307 104 11 chr2 134983416 134983703 -118272880 - L1ME LINE L1 -422 5699 5386 247 292 130 0 chr2 134983747 134983908 -118272675 - L1ME4a LINE L1 -201 5920 5739 1515 185 134 53 chr2 134983932 134984190 -118272393 - MLT1C LTR MaLR 0 467 159 2010 89 63 0 chr2 134984190 134984460 -118272123 - AluSc SINE Alu -22 287 1 1515 185 134 53 chr2 134984460 134984633 -118271950 - MLT1C LTR MaLR -308 159 1 216 278 70 17 chr2 134985580 134985695 -118270888 - MIR SINE MIR -21 241 121 2437 264 39 39 chr2 134986093 134987579 -118269004 + L1MCb LINE L1 3 1487 -4851 303 175 0 0 chr2 134987958 134988015 -118268568 + (TG)n Simple_repeat Simple_repeat 2 58 0 2926 10 0 0 chr2 134988633 134988944 -118267639 + AluYa5 SINE Alu 1 311 0 291 205 24 60 chr2 134989127 134989210 -118267373 - MER76 LTR ERV -608 80 1 301 242 98 45 chr2 134990316 134990448 -118266135 + L1MB7 LINE L1 10 148 -6711 623 232 88 81 chr2 134991096 134991380 -118265203 + L1MB7 LINE L1 932 1217 -5642 1518 234 119 33 chr2 134991623 134992549 -118264034 + L1MB7 LINE L1 1211 2227 -4732 455 218 177 0 chr2 134992556 134992680 -118263903 + MLT1B LTR MaLR 28 173 -217 300 137 0 0 chr2 134992698 134992749 -118263834 + (TC)n Simple_repeat Simple_repeat 2 52 0 972 192 16 0 chr2 134992769 134992951 -118263632 + MLT1B LTR MaLR 206 390 0 495 268 98 13 chr2 134992951 134993175 -118263408 + L1MB7 LINE L1 2245 2487 -4472 2225 116 0 3 chr2 134993185 134993487 -118263096 + AluSg SINE Alu 1 301 -9 288 0 0 0 chr2 134993671 134993703 -118262880 + (TG)n Simple_repeat Simple_repeat 1 32 0 3748 241 127 42 chr2 134993755 134994210 -118262373 + L1MB7 LINE L1 2749 3164 -3981 2121 141 0 3 chr2 134994210 134994515 -118262068 + AluSp SINE Alu 1 304 -9 3748 241 127 42 chr2 134994515 134998012 -118258571 + L1MB7 LINE L1 3164 7145 0 202 333 0 9 chr2 134998498 134998606 -118257977 + T-rich Low_complexity Low_complexity 3 109 0 4389 254 107 47 chr2 135000301 135001050 -118255533 - L1MEc LINE L1 -3948 2448 1746 1586 118 159 110 chr2 135001050 135001458 -118255125 - MSTA LTR MaLR 0 428 1 4389 254 107 47 chr2 135001458 135001537 -118255046 - L1MEc LINE L1 -4650 1746 1673 1314 239 61 6 chr2 135001537 135001880 -118254703 - MLT1A1 LTR MaLR -3 362 1 4389 254 107 47 chr2 135001880 135002749 -118253834 - L1MEc LINE L1 -4723 1673 858 2332 97 7 0 chr2 135002749 135003049 -118253534 - AluSp SINE Alu -11 302 1 4389 254 107 47 chr2 135003049 135003625 -118252958 - L1MEc LINE L1 -5538 858 36 269 268 40 39 chr2 135003796 135003941 -118252642 - MIR SINE MIR -62 146 34 368 302 52 32 chr2 135005891 135006199 -118250384 + LTR16C LTR ERVL 168 481 -10 5059 201 66 23 chr2 135007148 135009298 -118247285 - L1MC2 LINE L1 -10 6334 4097 1056 154 0 0 chr2 135009311 135009473 -118247110 + AluSg/x SINE Alu 149 310 0 556 259 7 0 chr2 135009478 135009613 -118246970 - L1MC2 LINE L1 -2047 4099 3964 257 321 0 0 chr2 135009994 135010078 -118246505 - MER103 DNA DNA -42 124 41 254 325 88 0 chr2 135010969 135011083 -118245500 - L3 LINE CR1 -11 1566 1443 278 237 88 61 chr2 135012112 135012226 -118244357 - L2 LINE L2 -5 3308 3192 1435 183 113 0 chr2 135012607 135012962 -118243621 + L1PA16 LINE L1 5756 6150 -16 195 286 0 52 chr2 135013332 135013409 -118243174 + L2 LINE L2 2963 3035 -237 244 254 0 0 chr2 135014079 135014134 -118242449 - L2 LINE L2 -9 3263 3209 2100 129 0 0 chr2 135014210 135014519 -118242064 + AluSx SINE Alu 1 312 0 1388 234 66 9 chr2 135014988 135015321 -118241262 - MLT1A1 LTR MaLR -2 363 12 2617 73 28 20 chr2 135017575 135018088 -118238495 + L1PA7 LINE L1 4990 5505 -649 1846 73 0 0 chr2 135018188 135018457 -118238126 + L1PA7 LINE L1 5921 6189 0 2030 141 16 0 chr2 135019536 135019842 -118236741 - AluSq SINE Alu -2 311 1 814 287 29 32 chr2 135023941 135024255 -118232328 - L1MDa LINE L1 -6201 339 27 271 313 39 8 chr2 135025870 135025998 -118230585 - MIR SINE MIR -111 151 20 181 316 79 35 chr2 135026027 135026141 -118230442 - L2 LINE L2 -25 3247 3129 252 240 230 0 chr2 135026646 135026746 -118229837 + MIR SINE MIR 71 193 -69 329 264 8 78 chr2 135028120 135028249 -118228334 + L1MEc LINE L1 35 154 -6242 437 146 0 212 chr2 135028256 135028393 -118228190 - L1ME LINE L1 -543 5623 5516 1134 69 0 0 chr2 135028394 135028524 -118228059 + AluY SINE Alu 1 130 -181 843 134 8 15 chr2 135028550 135028684 -118227899 + AluY SINE Alu 125 257 -54 354 257 18 0 chr2 135028795 135028904 -118227679 - L1ME LINE L1 -847 5512 5402 683 167 14 7 chr2 135028915 135029053 -118227530 - L1ME LINE L1 -1051 5095 4957 307 267 0 0 chr2 135029051 135029141 -118227442 - L1ME LINE L1 -2365 3781 3692 * 297 89 0 0 chr2 135031005 135031050 -118225533 + (TG)n Simple_repeat Simple_repeat 1 45 0 551 259 96 5 chr2 135033964 135034161 -118222422 - MIR SINE MIR -30 232 18 702 204 12 35 chr2 135034189 135034361 -118222222 + Tigger3(Golem) DNA MER2_type 2860 3027 -2 486 300 56 6 chr2 135034566 135034746 -118221837 + MIR SINE MIR 34 222 -40 217 280 113 100 chr2 135036074 135036224 -118220359 - L2 LINE L2 0 3272 3121 291 339 8 16 chr2 135036432 135036553 -118220030 - L2 LINE L2 -229 3043 2924 189 241 0 0 chr2 135038456 135038510 -118218073 + (CA)n Simple_repeat Simple_repeat 1 54 0 2268 115 0 0 chr2 135039180 135039476 -118217107 + AluSg SINE Alu 1 296 -14 7878 240 71 33 chr2 135039571 135043436 -118213147 - L1MD2 LINE L1 0 6753 2610 2149 115 0 26 chr2 135043436 135043741 -118212842 - AluSx SINE Alu -14 298 2 7878 240 71 33 chr2 135043741 135045420 -118211163 - L1MD2 LINE L1 -4143 2610 996 403 276 84 52 chr2 135045819 135046105 -118210478 - L1MD2 LINE L1 -6196 344 50 244 309 103 18 chr2 135046721 135046886 -118209697 + L2 LINE L2 3083 3261 -52 3164 225 129 38 chr2 135046923 135048210 -118208373 + L1MCb LINE L1 813 1981 -4583 1391 192 34 27 chr2 135048210 135048502 -118208081 + AluJo SINE Alu 1 294 -18 1821 147 0 8 chr2 135048503 135048769 -118207814 + AluSx SINE Alu 2 265 -47 3164 225 129 38 chr2 135048769 135049977 -118206606 + L1MCb LINE L1 1981 3794 -2770 2502 71 0 0 chr2 135049977 135050274 -118206309 - AluY SINE Alu -14 297 1 3164 225 129 38 chr2 135050274 135050378 -118206205 + L1MCb LINE L1 3794 3887 -2677 2234 91 3 0 chr2 135050379 135050665 -118205918 - AluSx SINE Alu -4 308 22 1384 268 15 5 chr2 135050667 135051078 -118205505 + L1MCb LINE L1 4502 4916 -1648 374 223 33 165 chr2 135051054 135051262 -118205321 + L1MCb LINE L1 5364 5505 -1059 * 2294 121 43 55 chr2 135051262 135051699 -118204884 + L1MA6 LINE L1 5869 6300 0 374 223 33 165 chr2 135051699 135051853 -118204730 + L1MCb LINE L1 5505 5678 -886 5146 200 69 46 chr2 135051854 135051971 -118204612 + L1MC3 LINE L1 6049 6162 -1623 1085 189 0 0 chr2 135051971 135052146 -118204437 + FAM SINE Alu 1 175 0 5146 200 69 46 chr2 135052146 135052585 -118203998 + L1MC3 LINE L1 6162 6589 -1196 7264 65 11 12 chr2 135052585 135054293 -118202290 + L1PA8 LINE L1 4463 6171 -1 5146 200 69 46 chr2 135054293 135055096 -118201487 + L1MC3 LINE L1 6589 7441 -344 370 297 83 22 chr2 135055279 135055631 -118200952 - L2 LINE L2 -5 3308 2878 20064 180 34 11 chr2 135056642 135058878 -118197705 + ERVL-B1 LTR ERVL 584 2936 -2828 1591 182 17 34 chr2 135058878 135059175 -118197408 + AluJo SINE Alu 1 292 -20 20064 180 34 11 chr2 135059175 135060536 -118196047 + ERVL-B1 LTR ERVL 2936 4264 -1500 6736 155 29 55 chr2 135060534 135061373 -118195210 + ERVL-B1 LTR ERVL 4496 5356 -408 * 1896 92 11 46 chr2 135061373 135061657 -118194926 + AluSc SINE Alu 1 274 -35 474 18 0 0 chr2 135061658 135061713 -118194870 + (TC)n Simple_repeat Simple_repeat 2 56 0 6736 155 29 55 chr2 135061713 135061860 -118194723 + ERVL-B1 LTR ERVL 5356 5505 -259 2345 99 0 0 chr2 135061860 135062162 -118194421 - AluSq SINE Alu -6 307 6 6736 155 29 55 chr2 135062162 135062458 -118194125 + ERVL-B1 LTR ERVL 5505 5747 -17 1454 251 111 0 chr2 135062463 135062850 -118193733 + MLT2B1 LTR ERVL 3 432 -88 5571 238 40 41 chr2 135063104 135063851 -118192732 - L1M4 LINE L1 -849 5366 4619 673 227 8 0 chr2 135063851 135063983 -118192600 + FLAM_C SINE Alu 1 133 0 5571 238 40 41 chr2 135063983 135065256 -118191327 - L1M4 LINE L1 -1596 4619 3411 2420 278 47 41 chr2 135065248 135065950 -118190633 - L1MEc LINE L1 -661 5572 4876 * 1234 186 93 96 chr2 135065950 135066316 -118190267 - MLT1A1 LTR MaLR 0 365 1 2420 278 47 41 chr2 135066316 135067301 -118189282 - L1MEc LINE L1 -1357 4876 3899 1635 217 23 50 chr2 135067301 135067697 -118188886 - MLT1B LTR MaLR -3 387 3 2420 278 47 41 chr2 135067697 135068083 -118188500 - L1MEc LINE L1 -2334 3899 1235 221 182 18 0 chr2 135068384 135068439 -118188144 + (TA)n Simple_repeat Simple_repeat 2 57 0 21 0 0 0 chr2 135068481 135068502 -118188081 + AT_rich Low_complexity Low_complexity 1 21 0 386 319 50 13 chr2 135068639 135068877 -118187706 - HAL1b LINE L1 -810 538 292 3500 27 12 2 chr2 135069052 135069453 -118187130 - L1PA3 LINE L1 0 6155 5751 213 119 0 0 chr2 135069454 135069496 -118187087 + (T)n Simple_repeat Simple_repeat 1 42 0 43855 30 21 3 chr2 135069498 135073824 -118182759 - L1HS LINE L1 0 6155 1682 2836 7 0 3 chr2 135073824 135074132 -118182451 + AluYa5 SINE Alu 1 307 -4 43855 30 21 3 chr2 135074132 135075845 -118180738 - L1HS LINE L1 -4473 1682 2 1543 209 68 3 chr2 135076781 135077135 -118179448 - L1MB7 LINE L1 -203 5981 5605 634 161 0 0 chr2 135077156 135077268 -118179315 - L1MB7 LINE L1 -706 5472 5361 409 253 60 0 chr2 135077278 135077428 -118179155 - L1M4c LINE L1 -4223 2423 2265 449 275 7 7 chr2 135077472 135077610 -118178973 - L1M4c LINE L1 -4541 2105 1968 4608 237 54 31 chr2 135077610 135078919 -118177664 - L1M4c LINE L1 -5200 1342 3 226 167 0 0 chr2 135079078 135079120 -118177463 - L1MEc LINE L1 -4812 1584 1543 2390 91 0 0 chr2 135079480 135079778 -118176805 + AluSc SINE Alu 6 303 -6 934 329 88 19 chr2 135079780 135080306 -118176277 + L1MCc LINE L1 49 610 -5813 301 305 40 62 chr2 135080479 135080656 -118175927 + HsTC2 DNA Tc2 534 706 -1192 866 324 70 33 chr2 135080738 135081164 -118175419 + L2 LINE L2 88 529 -2785 707 273 154 21 chr2 135081315 135081838 -118174745 + L2 LINE L2 2520 3134 -179 317 141 0 56 chr2 135081902 135081973 -118174610 - L1MC3 LINE L1 -8 7777 7711 201 121 0 0 chr2 135081971 135082004 -118174579 + (TC)n Simple_repeat Simple_repeat 2 34 0 * 323 210 0 100 chr2 135082004 135082104 -118174479 + L1MC4 LINE L1 6614 6703 -1339 1857 230 34 5 chr2 135082120 135082563 -118174020 - L1MC3 LINE L1 -77 7708 7253 23 0 0 0 chr2 135082712 135082735 -118173848 + AT_rich Low_complexity Low_complexity 1 23 0 5750 37 6 0 chr2 135082735 135083411 -118173172 - L1PA5 LINE L1 -13 6141 5462 234 336 78 35 chr2 135083686 135083802 -118172781 + LTR67 LTR ERVL 83 203 -354 1982 118 3 17 chr2 135084262 135084579 -118172004 - AluSx SINE Alu 0 313 1 474 339 111 24 chr2 135084816 135085276 -118171307 - HAL1 LINE L1 -844 1663 1164 1811 124 77 4 chr2 135085582 135085855 -118170728 + AluSg SINE Alu 5 297 -13 537 200 0 0 chr2 135085870 135085970 -118170613 + U13 snRNA snRNA 5 104 0 198 0 0 0 chr2 135086368 135086390 -118170193 + (TTTTG)n Simple_repeat Simple_repeat 1 22 0 1787 113 13 0 chr2 135086393 135086631 -118169952 - AluSp SINE Alu -41 272 32 2257 117 3 0 chr2 135087532 135087840 -118168743 - AluSc SINE Alu 0 309 1 231 114 0 0 chr2 135088071 135088106 -118168477 + (T)n Simple_repeat Simple_repeat 1 35 0 26 0 0 0 chr2 135089438 135089464 -118167119 + AT_rich Low_complexity Low_complexity 1 26 0 1141 220 53 25 chr2 135092894 135093176 -118163407 + MER97a DNA MER1_type? 1 290 -604 4628 73 63 119 chr2 135093176 135093500 -118163083 - L1PA8 LINE L1 -4 6168 5827 2138 132 0 25 chr2 135093500 135093819 -118162764 - AluSx SINE Alu -1 311 1 4628 73 63 119 chr2 135093819 135094341 -118162242 - L1PA8 LINE L1 -345 5827 5370 2134 74 20 0 chr2 135094339 135094635 -118161948 + L1PA8 LINE L1 5060 5361 -785 * 1614 265 98 4 chr2 135094635 135095178 -118161405 + MER97a DNA MER1_type? 277 870 -24 199 337 129 0 chr2 135097034 135097135 -118159448 - L2 LINE L2 -25 3288 3175 227 263 0 0 chr2 135099861 135099918 -118156665 - L2 LINE L2 0 3313 3257 273 180 0 0 chr2 135100218 135100268 -118156315 - L2 LINE L2 -216 3056 3007 369 278 150 22 chr2 135100374 135100647 -118155936 + MLT1K LTR MaLR 195 502 -86 3283 151 3 74 chr2 135100650 135101299 -118155284 + LTR26 LTR ERV1 1 603 0 312 234 84 0 chr2 135104384 135104491 -118152092 + L1M4 LINE L1 3146 3261 -2885 1328 220 79 0 chr2 135104517 135104835 -118151748 + MER2 DNA MER2_type 2 344 0 22 56 0 0 chr2 135104835 135104871 -118151712 + AT_rich Low_complexity Low_complexity 1 36 0 1559 193 103 0 chr2 135104877 135105188 -118151395 - MLT1A1 LTR MaLR -12 353 11 2218 268 78 14 chr2 135105237 135105491 -118151092 + L1MEc LINE L1 42 278 -6118 4002 60 2 2 chr2 135105491 135105990 -118150593 + L1PA5 LINE L1 5655 6153 -1 2218 268 78 14 chr2 135105990 135106713 -118149870 + L1MEc LINE L1 278 1108 -5288 1584 231 39 30 chr2 135106708 135107141 -118149442 + L1ME1 LINE L1 9 445 -5600 * 862 207 21 16 chr2 135107206 135107394 -118149189 + LTR52 LTR ERVL 4 192 -229 833 266 61 7 chr2 135107394 135107687 -118148896 + L1ME1 LINE L1 1662 1970 -4594 * 3751 244 44 25 chr2 135107663 135107921 -118148662 + L1ME1 LINE L1 3445 3696 -2868 2289 83 10 3 chr2 135107921 135108209 -118148374 + AluY SINE Alu 7 296 -15 3751 244 44 25 chr2 135108209 135108854 -118147729 + L1ME1 LINE L1 3696 4385 -2179 396 0 0 0 chr2 135108854 135108898 -118147685 + (CA)n Simple_repeat Simple_repeat 2 45 0 3751 244 44 25 chr2 135108898 135109323 -118147260 + L1ME1 LINE L1 4385 4800 -1764 5383 135 38 20 chr2 135109332 135110296 -118146287 + L1PA16 LINE L1 5184 6165 -1 2475 218 20 57 chr2 135110298 135111093 -118145490 + L1ME1 LINE L1 4840 5605 -959 4195 204 79 61 chr2 135111158 135111980 -118144603 + L1MD2 LINE L1 4426 5232 -1127 1953 127 0 3 chr2 135111980 135112271 -118144312 + L1PA10 LINE L1 5874 6163 -5 4195 204 79 61 chr2 135112271 135113339 -118143244 + L1MD2 LINE L1 5232 6344 -15 2139 109 0 43 chr2 135113342 135113646 -118142937 + AluSx SINE Alu 1 291 -21 877 290 11 31 chr2 135113654 135114009 -118142574 + L1ME1 LINE L1 6233 6580 -4 425 297 139 39 chr2 135114466 135115230 -118141353 + L1M4 LINE L1 3882 4721 -1425 1937 173 21 18 chr2 135117228 135117615 -118138968 - MLT1B LTR MaLR -2 388 1 2236 118 0 3 chr2 135121714 135122011 -118134572 + AluSx SINE Alu 3 298 -14 1105 211 106 35 chr2 135123986 135124327 -118132256 + MLT1A1 LTR MaLR 1 365 0 401 262 124 21 chr2 135125172 135125317 -118131266 + MER5B DNA MER1_type 11 170 -8 1414 246 25 44 chr2 135126427 135126470 -118130113 - MER110 LTR ERV1 -4 487 445 1886 172 20 0 chr2 135126470 135126766 -118129817 + AluJb SINE Alu 1 302 -10 1414 246 25 44 chr2 135126766 135127156 -118129427 - MER110 LTR ERV1 -46 445 62 192 329 12 12 chr2 135128935 135129020 -118127563 - MIR SINE MIR -84 178 94 365 173 19 4 chr2 135129401 135129611 -118126972 + AluJo SINE Alu 1 302 0 2184 130 0 3 chr2 135129689 135129982 -118126601 + AluSx SINE Alu 1 292 -20 5903 192 47 9 chr2 135130015 135132196 -118124387 - L1MB4 LINE L1 -55 6125 3868 3922 181 60 58 chr2 135132200 135133157 -118123426 - L1MC3 LINE L1 -1360 6425 5467 3882 252 30 17 chr2 135133171 135134358 -118122225 + L1 LINE L1 2667 3868 -2278 942 218 97 5 chr2 135134358 135134574 -118122009 - MER46A DNA MER2_type 0 236 1 3978 198 103 13 chr2 135134575 135135126 -118121457 + L1MC3 LINE L1 6424 7089 -696 210 118 0 0 chr2 135135126 135135160 -118121423 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 3978 198 103 13 chr2 135135160 135135513 -118121070 + L1MC3 LINE L1 7089 7409 -376 2174 119 3 0 chr2 135135637 135135930 -118120653 + AluSx SINE Alu 1 294 -18 1039 156 73 0 chr2 135136032 135136211 -118120372 + LTR47A LTR ERVL 261 452 0 1930 170 67 0 chr2 135136211 135136570 -118120013 + L1MC3 LINE L1 7396 7778 -7 378 246 67 18 chr2 135140176 135140416 -118116167 + MLT1G1 LTR MaLR 109 339 -203 633 224 99 10 chr2 135140435 135140627 -118115956 + L1MB8 LINE L1 5968 6176 -2 492 256 43 43 chr2 135142036 135142200 -118114383 + MER110 LTR ERV1 1 164 -327 389 239 86 8 chr2 135142289 135142406 -118114177 + MER110 LTR ERV1 346 471 -20 186 290 29 0 chr2 135142408 135142477 -118114106 - MIR SINE MIR -132 130 60 248 321 82 71 chr2 135142919 135142968 -118113615 + MIR SINE MIR 4 51 -211 2150 119 0 0 chr2 135142968 135143295 -118113288 - AluSc SINE Alu 0 309 1 248 321 82 71 chr2 135143295 135143429 -118113154 + MIR SINE MIR 51 189 -73 1245 293 25 45 chr2 135144293 135144777 -118111806 - MER115 DNA AcHobo 0 693 220 4932 156 68 16 chr2 135144969 135146189 -118110394 + L1PB3 LINE L1 4872 6147 -7 229 257 136 57 chr2 135147297 135147437 -118109146 - MIR SINE MIR -35 173 20 3375 165 61 25 chr2 135147490 135148024 -118108559 - L1MA8 LINE L1 -4 6287 5774 297 0 0 0 chr2 135148024 135148057 -118108526 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1943 131 0 24 chr2 135148057 135148348 -118108235 - AluSx SINE Alu -28 284 1 3375 165 61 25 chr2 135148348 135148483 -118108100 - L1MA8 LINE L1 -516 5775 5593 230 302 0 0 chr2 135148706 135148759 -118107824 - L2 LINE L2 -5 3267 3215 311 255 108 38 chr2 135149382 135149539 -118107044 + MLT1J2 LTR MaLR 253 420 -30 2410 83 3 0 chr2 135150339 135150641 -118105942 - AluSq SINE Alu -10 303 1 4272 237 75 59 chr2 135150828 135152786 -118103797 + L1M4 LINE L1 16 2036 -4610 4088 146 22 12 chr2 135152865 135153542 -118103041 - L1MA9 LINE L1 -1 6311 5628 2149 183 16 37 chr2 135153544 135154030 -118102553 + L1 LINE L1 3723 4198 -1948 1182 264 30 25 chr2 135154116 135154676 -118101907 + L1M4 LINE L1 2298 2900 -3884 1931 236 36 30 chr2 135155490 135156096 -118100487 + L1M4 LINE L1 2927 3536 -3108 1324 216 45 36 chr2 135156092 135156426 -118100157 + L1MA9 LINE L1 5938 6274 -38 * 2542 239 76 71 chr2 135156408 135156755 -118099828 + L1M4 LINE L1 3508 3852 -2792 680 210 0 16 chr2 135156755 135156879 -118099704 + FLAM_A SINE Alu 1 122 -11 2542 239 76 71 chr2 135156879 135157771 -118098812 + L1M4 LINE L1 3852 4753 -1891 226 279 15 0 chr2 135158392 135158460 -118098123 + MLT1K LTR MaLR 504 572 -16 4271 35 22 0 chr2 135159582 135160071 -118096512 - L1PA4 LINE L1 0 6155 5656 2217 84 0 0 chr2 135160173 135160446 -118096137 - AluSg SINE Alu -12 298 26 300 268 57 41 chr2 135160829 135160952 -118095631 + MIR SINE MIR 22 146 -62 313 296 19 44 chr2 135161419 135161578 -118095005 - LTR33 LTR ERVL 0 521 367 326 267 95 0 chr2 135161654 135161759 -118094824 - LTR33 LTR ERVL -310 211 97 1992 232 84 31 chr2 135161785 135162341 -118094242 - MLT1E LTR MaLR 0 593 8 231 264 58 35 chr2 135162459 135162546 -118094037 - MIR3 SINE MIR -1 207 119 200 302 58 12 chr2 135163823 135163909 -118092674 - L2 LINE L2 -12 3301 3212 2139 168 92 26 chr2 135163909 135164304 -118092279 + MLT2C2 LTR ERVL 6 432 -32 492 18 0 0 chr2 135164304 135164361 -118092222 + (TAGA)n Simple_repeat Simple_repeat 1 57 0 2139 168 92 26 chr2 135164361 135164389 -118092194 + MLT2C2 LTR ERVL 432 457 -7 2433 172 16 113 chr2 135164448 135165135 -118091448 - L1MA4 LINE L1 -1 6299 5680 * 2928 175 21 25 chr2 135165132 135166091 -118090492 + L1M4 LINE L1 4736 5837 -813 7875 234 35 19 chr2 135166091 135166638 -118089945 + ERVL LTR ERVL 43 580 -5113 245 133 0 22 chr2 135166638 135166683 -118089900 + L1M1 LINE L1 5529 5572 -728 7875 234 35 19 chr2 135166683 135168333 -118088250 + ERVL LTR ERVL 580 2379 -3314 1276 108 5 0 chr2 135168349 135168535 -118088048 + L1PA14 LINE L1 5776 5962 -199 616 133 0 0 chr2 135168535 135168618 -118087965 + AluS SINE Alu 2 84 -228 2511 159 3 0 chr2 135168621 135169012 -118087571 + ERVL LTR ERVL 2432 2823 -2941 2688 182 64 8 chr2 135169061 135169637 -118086946 + ERVL LTR ERVL 4958 5597 -167 566 267 0 0 chr2 135169637 135169768 -118086815 + L1M4 LINE L1 3487 3617 -2529 2503 53 0 0 chr2 135169860 135170160 -118086423 + AluY SINE Alu 3 302 -9 189 419 8 0 chr2 135170181 135170298 -118086285 - L3 LINE CR1 -209 1368 1251 387 335 77 16 chr2 135170399 135170593 -118085990 + MIR SINE MIR 1 206 -56 225 379 41 21 chr2 135170748 135170893 -118085690 - L3 LINE CR1 -571 1006 859 2843 244 73 51 chr2 135171127 135172212 -118084371 - L1M4 LINE L1 -990 5156 4048 2902 241 89 36 chr2 135172214 135173365 -118083218 - L1MCb LINE L1 -4806 1758 547 659 219 162 72 chr2 135173371 135173636 -118082947 - L1MCb LINE L1 -5804 241 4 * 12924 155 42 61 chr2 135173627 135173922 -118082661 - L1PB1 LINE L1 -1 7074 6775 6036 138 15 0 chr2 135173922 135175073 -118081510 - L1PA15 LINE L1 -1 6164 4994 12924 155 42 61 chr2 135175073 135177362 -118079221 - L1PB1 LINE L1 -300 6775 4444 1877 175 27 3 chr2 135177362 135177693 -118078890 - THE1C LTR MaLR 0 375 37 12924 155 42 61 chr2 135177693 135179994 -118076589 - L1PB1 LINE L1 -2631 4444 2101 2258 103 3 16 chr2 135179994 135180305 -118076278 - AluSx SINE Alu -5 307 1 12924 155 42 61 chr2 135180305 135181190 -118075393 - L1PB1 LINE L1 -4974 2101 1154 1804 126 53 0 chr2 135181190 135181484 -118075099 - AluSx SINE Alu 0 313 6 12924 155 42 61 chr2 135181484 135181996 -118074587 - L1PB1 LINE L1 -5921 1154 634 1048 210 0 0 chr2 135181996 135182196 -118074387 - L1PB1 LINE L1 -6663 200 1 6156 207 14 2 chr2 135182205 135183467 -118073116 - L1PA15 LINE L1 -1130 5016 3740 1695 193 13 30 chr2 135183477 135183870 -118072713 + L1P LINE L1 2788 3173 -2973 16972 165 23 17 chr2 135183877 135186956 -118069627 + L1MA3 LINE L1 18 3117 -4448 5615 134 16 32 chr2 135186967 135187998 -118068585 + L1MA3 LINE L1 6711 7724 0 2441 211 12 19 chr2 135188001 135188574 -118068009 + L1M1 LINE L1 4600 5168 -2397 * 3385 231 38 11 chr2 135188569 135189607 -118066976 - L1MD2 LINE L1 -233 6126 5058 1484 233 79 18 chr2 135189657 135189987 -118066596 + MLT2B1 LTR ERVL 12 361 -159 190 213 12 38 chr2 135189999 135190079 -118066504 + (TA)n Simple_repeat Simple_repeat 1 78 0 268 256 6 131 chr2 135190129 135190305 -118066278 - L1MD2 LINE L1 -1145 5001 4848 1179 113 128 15 chr2 135190355 135190558 -118066025 + L1P LINE L1 1 226 -5920 36026 73 23 5 chr2 135240558 135245341 -118011242 + L1P LINE L1 227 5094 -1052 263 289 67 48 chr2 135246195 135246299 -118010284 + MIR SINE MIR 33 138 -70 711 239 129 10 chr2 135246565 135246766 -118009817 - MLT1C LTR MaLR 0 467 243 360 165 50 83 chr2 135246775 135246896 -118009687 - L1MC1 LINE L1 -15 6318 6202 405 200 222 22 chr2 135246897 135247032 -118009551 - MLT1C LTR MaLR -241 226 65 2019 153 143 2 chr2 135247081 135247486 -118009097 - L1MCa LINE L1 -5948 478 17 327 131 66 0 chr2 135247489 135247550 -118009033 - L1MDa LINE L1 -4148 2392 2328 269 233 11 11 chr2 135247556 135247732 -118008851 + (TA)n Simple_repeat Simple_repeat 2 177 0 218 329 19 19 chr2 135247939 135248097 -118008486 + G-rich Low_complexity Low_complexity 4 161 0 254 209 0 47 chr2 135249073 135249159 -118007424 + (AGGTG)n Simple_repeat Simple_repeat 3 84 0 421 260 27 20 chr2 135249260 135249406 -118007177 + MER96B DNA MER1_type? 179 325 -92 183 139 0 0 chr2 135249624 135249660 -118006923 + (CAAAAA)n Simple_repeat Simple_repeat 3 38 0 281 186 76 76 chr2 135250101 135250219 -118006364 + L1ME4a LINE L1 5999 6116 -5 319 264 146 27 chr2 135251044 135251154 -118005429 + L2 LINE L2 3190 3312 -1 1854 251 82 15 chr2 135251224 135252499 -118004084 + L1ME2 LINE L1 4706 6098 -66 300 252 24 55 chr2 135252567 135252694 -118003889 + L1MC5 LINE L1 7772 7894 -67 2734 164 14 5 chr2 135252700 135253122 -118003461 + MSTB LTR MaLR 1 426 0 2494 145 59 7 chr2 135253123 135253530 -118003053 + MSTA LTR MaLR 1 428 0 4179 206 25 28 chr2 135257102 135258801 -117997782 - L1MB7 LINE L1 -9 6175 4483 399 288 71 27 chr2 135258825 135259105 -117997478 - L1MDb LINE L1 -5654 429 117 2490 185 51 11 chr2 135262006 135262460 -117994123 + MER70A LTR ERVL 1 472 0 203 152 0 0 chr2 135263028 135263061 -117993522 + CT-rich Low_complexity Low_complexity 2 34 0 2064 103 29 0 chr2 135263095 135263411 -117993172 - AluSc SINE Alu 0 324 1 239 314 26 84 chr2 135263613 135263836 -117992747 - MIR SINE MIR -40 222 10 1362 254 40 39 chr2 135263957 135264116 -117992467 - L1MB7 LINE L1 -3396 2750 2593 2067 115 0 23 chr2 135264116 135264421 -117992162 + AluY SINE Alu 1 298 -13 2313 72 0 0 chr2 135264423 135264721 -117991862 + AluSq SINE Alu 21 318 0 1362 254 40 39 chr2 135264721 135265128 -117991455 - L1MB7 LINE L1 -3553 2593 2178 2061 268 75 31 chr2 135265144 135266394 -117990189 - L1ME3A LINE L1 -23 6216 4903 484 326 109 31 chr2 135266420 135266806 -117989777 - L1ME3A LINE L1 -4109 2287 1872 294 268 57 67 chr2 135266829 135267023 -117989560 - L1ME3A LINE L1 -4586 1810 1619 2150 69 0 82 chr2 135267105 135267439 -117989144 + AluY SINE Alu 1 309 0 21 0 0 0 chr2 135267439 135267460 -117989123 + AT_rich Low_complexity Low_complexity 1 21 0 290 274 38 9 chr2 135268384 135268490 -117988093 - L1MDb LINE L1 -5925 145 37 307 276 102 64 chr2 135269402 135269667 -117986916 + L1MEd LINE L1 67 341 -5778 343 237 0 0 chr2 135269687 135269763 -117986820 - MIR SINE MIR -15 247 172 900 280 52 29 chr2 135269898 135270205 -117986378 - MLT1J1 LTR MaLR -132 314 1 310 274 141 22 chr2 135270207 135270342 -117986241 - MIR SINE MIR -92 170 20 311 298 89 42 chr2 135271506 135271674 -117984909 + MLT1H1 LTR MaLR 69 244 -346 31454 97 13 11 chr2 135271674 135277346 -117979237 + L1PA7 LINE L1 752 6461 -8 405 254 219 19 chr2 135277425 135277685 -117978898 + MLT1H1 LTR MaLR 242 553 -2 2865 269 83 80 chr2 135278343 135280578 -117976005 - L1MC5 LINE L1 -30 7931 5710 1746 165 32 0 chr2 135280578 135280863 -117975720 - AluJb SINE Alu -6 306 13 2865 269 83 80 chr2 135280863 135281833 -117974750 - L1MC5 LINE L1 -2251 5710 4745 342 283 66 42 chr2 135281956 135282168 -117974415 - L1MC5 LINE L1 -1599 4547 4331 309 68 0 0 chr2 135282170 135282214 -117974369 + (TA)n Simple_repeat Simple_repeat 2 45 0 364 267 30 0 chr2 135282262 135282397 -117974186 + (TA)n Simple_repeat Simple_repeat 1 139 0 1570 170 14 51 chr2 135282414 135282472 -117974111 - L1PB4 LINE L1 -6 6150 6091 2647 147 62 2 chr2 135282472 135282874 -117973709 - MSTB LTR MaLR 0 426 1 9165 180 35 5 chr2 135282874 135284477 -117972106 - MSTB-int LTR MaLR 0 1651 1 2521 149 42 38 chr2 135284477 135284688 -117971895 - MSTB LTR MaLR 0 426 218 2320 101 0 0 chr2 135284688 135284975 -117971608 + AluSx SINE Alu 1 287 -25 216 0 0 0 chr2 135284983 135285007 -117971576 + (GA)n Simple_repeat Simple_repeat 2 25 0 2521 149 42 38 chr2 135285007 135285210 -117971373 - MSTB LTR MaLR -214 212 1 1570 170 14 51 chr2 135285210 135285443 -117971140 - L1PB4 LINE L1 -62 6094 5868 670 296 91 45 chr2 135285497 135286313 -117970270 - L1MC5 LINE L1 -1904 4242 3386 6130 232 22 12 chr2 135286331 135287923 -117968660 + L1MC1 LINE L1 3443 5050 -1096 1520 167 16 0 chr2 135287948 135288321 -117968262 + L1MC1 LINE L1 5148 5525 -743 1453 184 8 0 chr2 135288326 135288587 -117967996 + L1MC1 LINE L1 5876 6138 -195 1190 178 0 5 chr2 135289197 135289399 -117967184 - AluJo SINE Alu -26 286 86 8794 232 66 44 chr2 135290642 135292498 -117964085 + L1MD2 LINE L1 1562 3375 -3378 3340 149 64 7 chr2 135292498 135293074 -117963509 + LTR38B LTR ERV1 2 610 0 8794 232 66 44 chr2 135293074 135295727 -117960856 + L1MD2 LINE L1 3375 5967 -786 2012 129 7 0 chr2 135295727 135296014 -117960569 + AluSg SINE Alu 1 289 -21 8794 232 66 44 chr2 135296014 135296208 -117960375 + L1MD2 LINE L1 5967 6155 -598 2034 150 0 0 chr2 135296208 135296494 -117960089 + AluSx SINE Alu 5 290 -22 8794 232 66 44 chr2 135296494 135296820 -117959763 + L1MD2 LINE L1 6155 6691 -62 1683 190 3 7 chr2 135296820 135297152 -117959431 - AluJo SINE Alu 0 312 1 8794 232 66 44 chr2 135297152 135297212 -117959371 + L1MD2 LINE L1 6691 6748 -5 4469 168 42 49 chr2 135297165 135298146 -117958437 - L1MB4 LINE L1 0 6180 5202 * 2988 233 51 13 chr2 135298147 135298985 -117957598 - L1MB4 LINE L1 -1053 5093 4224 1637 237 85 11 chr2 135298982 135299451 -117957132 + L1M4 LINE L1 3664 4167 -1979 * 336 130 0 14 chr2 135299480 135299549 -117957034 + L1MD2 LINE L1 6291 6358 -1 2164 110 7 19 chr2 135299617 135299925 -117956658 + AluSg SINE Alu 1 304 -6 2107 74 3 61 chr2 135299934 135300230 -117956353 + AluSx SINE Alu 17 295 -17 348 141 28 42 chr2 135300576 135300647 -117955936 + AluSp SINE Alu 121 190 -113 640 292 94 44 chr2 135300714 135301169 -117955414 + Charlie7 DNA MER1_type 209 686 -1926 21 0 0 0 chr2 135301184 135301205 -117955378 + AT_rich Low_complexity Low_complexity 1 21 0 2288 98 13 19 chr2 135301706 135302022 -117954561 - L1PA8 LINE L1 -6 6166 5853 14398 155 14 108 chr2 135302022 135305480 -117951103 - L1P LINE L1 -3012 3134 2 4209 202 54 1 chr2 135305490 135306367 -117950216 - L1MC3 LINE L1 0 7785 6863 653 139 25 41 chr2 135307209 135307332 -117949251 + L1M3 LINE L1 5551 5671 -500 451 169 0 0 chr2 135308012 135308089 -117948494 + MIR SINE MIR 186 262 0 251 317 22 27 chr2 135308225 135308352 -117948231 + MIR SINE MIR 24 141 -67 269 286 94 78 chr2 135308757 135309002 -117947581 + L2 LINE L2 2945 3193 -79 5550 151 22 12 chr2 135309922 135310955 -117945628 + L1PA16 LINE L1 5129 6166 0 834 264 120 92 chr2 135311634 135312224 -117944359 - MLT1L LTR MaLR -8 607 1 533 170 143 0 chr2 135314405 135314517 -117942066 - L2 LINE L2 -6 3307 3180 526 208 16 0 chr2 135314551 135314676 -117941907 + L1MB7 LINE L1 5080 5206 -940 1450 185 3 52 chr2 135314679 135314987 -117941596 + L1MA3 LINE L1 6013 6305 0 4369 193 31 5 chr2 135315234 135316152 -117940431 + L1MB7 LINE L1 5188 6125 -59 571 190 121 46 chr2 135316202 135316376 -117940207 + MER53 DNA DNA 2 188 -1 1654 83 65 0 chr2 135316608 135316824 -117939759 - MER30 DNA MER1_type 0 230 1 5182 154 39 6 chr2 135317620 135318522 -117938061 + L1MA6 LINE L1 5352 6283 -17 2211 123 181 10 chr2 135318535 135318950 -117937633 + LTR19A LTR ERV1 1 486 0 494 205 45 27 chr2 135319857 135319969 -117936614 - MER81 DNA DNA 0 114 1 1391 138 56 4 chr2 135320149 135320380 -117936203 + L1MB3 LINE L1 5941 6183 0 256 314 10 10 chr2 135320398 135320500 -117936083 + Charlie8 DNA MER1_type 378 479 -1938 219 103 0 0 chr2 135321845 135321884 -117934699 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 217 327 119 0 chr2 135322730 135322831 -117933752 + MIR SINE MIR 122 234 -28 227 377 28 0 chr2 135323833 135323939 -117932644 - MIR SINE MIR -78 130 22 2519 149 64 46 chr2 135324017 135324757 -117931826 + L1MA9 LINE L1 5476 6303 -9 1714 169 16 3 chr2 135324828 135325136 -117931447 + AluJo SINE Alu 1 312 0 186 264 83 14 chr2 135325406 135325478 -117931105 - L2 LINE L2 -338 2976 2900 1987 177 48 3 chr2 135325663 135325996 -117930587 + MER7A DNA MER2_type 1 346 0 395 304 29 0 chr2 135326381 135326483 -117930100 + MER81 DNA DNA 1 105 -9 403 227 23 0 chr2 135326836 135326924 -117929659 - MER81 DNA DNA 0 114 25 1556 98 0 40 chr2 135327346 135327592 -117928991 - AluSg/x SINE Alu 0 312 85 2136 122 0 0 chr2 135327592 135327880 -117928703 - AluSx SINE Alu -24 288 1 526 321 106 28 chr2 135327950 135328374 -117928209 - L2 LINE L2 -2 3311 2855 1012 306 144 19 chr2 135328628 135329199 -117927384 - L2 LINE L2 -653 2661 2020 260 322 43 0 chr2 135329446 135329561 -117927022 + LTR16A LTR ERVL 323 442 -8 690 336 93 8 chr2 135329570 135330043 -117926540 - L2 LINE L2 -2208 1106 594 2165 133 0 0 chr2 135330410 135330710 -117925873 - AluSx SINE Alu -12 300 1 2128 155 101 3 chr2 135330876 135331264 -117925319 + MSTB LTR MaLR 1 426 0 9653 226 69 15 chr2 135331287 135334559 -117922024 - L1MC3 LINE L1 -17 8162 4710 1618 179 102 12 chr2 135334575 135334910 -117921673 - L1MB7 LINE L1 -145 6039 5675 667 188 31 0 chr2 135335048 135335176 -117921407 - L1MD1 LINE L1 -22 6220 6089 560 236 160 28 chr2 135335221 135335371 -117921212 + L1MD2 LINE L1 5979 6166 -193 234 62 0 0 chr2 135335371 135335403 -117921180 + (CA)n Simple_repeat Simple_repeat 1 32 0 560 236 160 28 chr2 135335403 135335464 -117921119 + L1MD2 LINE L1 6166 6218 -141 * 3466 254 58 14 chr2 135335461 135336598 -117919985 - L1MC3 LINE L1 -2827 3713 2510 1799 171 0 3 chr2 135336598 135336890 -117919693 + AluJb SINE Alu 1 291 -21 3466 254 58 14 chr2 135336890 135337098 -117919485 - L1MC3 LINE L1 -4030 2510 2313 395 223 60 144 chr2 135337101 135337316 -117919267 - MLT1I LTR MaLR -72 337 141 1641 192 22 35 chr2 135338454 135338668 -117917915 - MLT1A1 LTR MaLR 0 365 157 2304 82 13 0 chr2 135338668 135338973 -117917610 - AluSc SINE Alu 0 309 1 1641 192 22 35 chr2 135338973 135339128 -117917455 - MLT1A1 LTR MaLR -208 157 1 493 86 0 0 chr2 135340017 135340087 -117916496 + LOR1b LTR ERV1 225 294 -167 670 123 10 210 chr2 135340087 135340282 -117916301 - AluJo/FRAM SINE Alu -10 292 137 1425 121 139 0 chr2 135340285 135340508 -117916075 - AluSg1 SINE Alu -14 295 42 1144 99 0 0 chr2 135340507 135340648 -117915935 - AluSq/x SINE Alu -170 142 2 * 2105 250 98 101 chr2 135340657 135342119 -117914464 - L1MC3 LINE L1 -5071 1469 12 395 19 19 0 chr2 135342692 135342744 -117913839 + (TG)n Simple_repeat Simple_repeat 1 53 0 247 324 0 0 chr2 135343318 135343389 -117913194 - MIR SINE MIR -116 146 76 589 287 22 17 chr2 135343782 135343963 -117912620 - MLT1H1 LTR MaLR -37 518 337 269 299 0 0 chr2 135344126 135344193 -117912390 + MER63 DNA MER1_type 994 1060 0 636 283 22 11 chr2 135344194 135344378 -117912205 - MLT1H1 LTR MaLR -361 194 9 210 276 0 0 chr2 135344382 135344440 -117912143 + (TG)n Simple_repeat Simple_repeat 1 58 0 306 273 48 49 chr2 135344765 135344987 -117911596 + MLT1L LTR MaLR 108 393 -222 2104 134 0 0 chr2 135346387 135346678 -117909905 - AluSc SINE Alu -18 291 1 317 149 15 0 chr2 135346906 135346973 -117909610 + (TAGTG)n Simple_repeat Simple_repeat 3 70 0 261 227 121 0 chr2 135349675 135349741 -117906842 + LTR67 LTR ERVL 91 164 -393 220 333 60 8 chr2 135350089 135350206 -117906377 + L2 LINE L2 3147 3269 -3 390 284 47 0 chr2 135351357 135351526 -117905057 + LTR33 LTR ERVL 334 510 -11 299 282 13 0 chr2 135351733 135351811 -117904772 + MIR SINE MIR 122 200 -62 293 183 70 14 chr2 135351973 135352044 -117904539 - MER103 DNA DNA -88 78 4 374 195 110 22 chr2 135353271 135353464 -117903119 - L1ME LINE L1 -662 5500 5271 1258 208 116 73 chr2 135353511 135353992 -117902591 + MLT1D LTR MaLR 1 502 -3 781 289 115 19 chr2 135354426 135354903 -117901680 + L1M4 LINE L1 2636 3158 -2988 26 30 0 0 chr2 135354937 135354970 -117901613 + AT_rich Low_complexity Low_complexity 1 33 0 1047 177 75 31 chr2 135355105 135355331 -117901252 + MER46A DNA MER2_type 1 236 0 672 263 183 21 chr2 135355772 135356144 -117900439 - LTR16A LTR ERVL 0 450 19 310 291 36 0 chr2 135356277 135356387 -117900196 + MIR SINE MIR 75 188 -74 252 0 0 0 chr2 135358287 135358315 -117898268 + (TA)n Simple_repeat Simple_repeat 2 29 0 3705 238 90 71 chr2 135358320 135358826 -117897757 - L1MDa LINE L1 -4223 2317 1822 2179 121 0 16 chr2 135358826 135359141 -117897442 + AluSx SINE Alu 1 310 -2 3705 238 90 71 chr2 135359141 135359379 -117897204 - L1MDa LINE L1 -4718 1822 1590 183 42 0 0 chr2 135359379 135359403 -117897180 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 751 112 0 0 chr2 135359413 135359520 -117897063 - AluSg/x SINE Alu -8 301 195 3705 238 90 71 chr2 135359520 135360970 -117895613 - L1MDa LINE L1 -4958 1582 14 7315 215 39 40 chr2 135361419 135363523 -117893060 + L1MC3 LINE L1 2671 4774 -3011 2169 126 0 0 chr2 135363523 135363816 -117892767 + AluSx SINE Alu 1 293 -19 7315 215 39 40 chr2 135363816 135363983 -117892600 + L1MC3 LINE L1 4774 7785 0 4221 266 78 30 chr2 135363975 135365951 -117890632 + L1ME1 LINE L1 3026 5096 -1050 * 788 59 20 151 chr2 135365951 135366032 -117890551 + L1MA1 LINE L1 6068 6121 -181 589 14 0 0 chr2 135366032 135366100 -117890483 + L1PA3 LINE L1 6083 6155 0 788 59 20 151 chr2 135366100 135366170 -117890413 + L1MA1 LINE L1 6121 6199 -103 1472 143 79 52 chr2 135366170 135366484 -117890099 - THE1C LTR MaLR 0 375 42 818 109 17 0 chr2 135366484 135366603 -117889980 + L1MA1 LINE L1 6182 6302 0 1472 143 79 52 chr2 135366603 135366618 -117889965 - THE1C LTR MaLR -333 42 29 2106 130 0 3 chr2 135366620 135366905 -117889678 + AluSg SINE Alu 1 284 -26 33 25 0 0 chr2 135366908 135366948 -117889635 + AT_rich Low_complexity Low_complexity 1 40 0 538 197 34 14 chr2 135366948 135367095 -117889488 + L1ME1 LINE L1 5083 5232 -914 1747 236 37 39 chr2 135367171 135367688 -117888895 + L1ME1 LINE L1 5629 6144 -22 1106 234 167 8 chr2 135367690 135368091 -117888492 + MLT1C LTR MaLR 1 465 -2 1795 160 30 3 chr2 135368246 135368546 -117888037 + AluSx SINE Alu 1 308 -4 865 253 18 15 chr2 135369246 135369519 -117887064 - AluJb SINE Alu -24 288 15 1419 197 7 10 chr2 135369979 135370268 -117886315 - AluJo SINE Alu -24 288 1 1994 128 0 14 chr2 135370809 135371105 -117885478 + AluY SINE Alu 1 292 -19 224 151 0 19 chr2 135371470 135371523 -117885060 + (CA)n Simple_repeat Simple_repeat 1 52 0 2044 127 7 0 chr2 135372076 135372367 -117884216 + AluSg SINE Alu 1 293 -17 464 268 189 25 chr2 135373366 135373683 -117882900 + MLT1J2 LTR MaLR 80 448 -2 2012 187 8 3 chr2 135373777 135374141 -117882442 + MER47A DNA MER2_type 1 366 0 283 282 35 0 chr2 135375606 135375691 -117880892 + MIR SINE MIR 110 197 -65 347 251 80 28 chr2 135375921 135376030 -117880553 - MER5A DNA MER1_type -5 184 60 3682 174 42 14 chr2 135376567 135377439 -117879144 - L1MD1 LINE L1 -259 5983 5086 1515 280 134 7 chr2 135377571 135378421 -117878162 - L1MDa LINE L1 -5395 1145 18 765 260 6 0 chr2 135379223 135379404 -117877179 - MIR SINE MIR -64 198 17 265 262 24 12 chr2 135379500 135379584 -117876999 - L2 LINE L2 -8 3264 3180 1324 250 29 35 chr2 135379792 135379882 -117876701 + L1MDb LINE L1 36 125 -6284 2175 118 10 0 chr2 135379882 135380178 -117876405 + AluSq SINE Alu 1 299 -14 1324 250 29 35 chr2 135380178 135380431 -117876152 + L1MDb LINE L1 125 377 -6032 268 318 144 0 chr2 135380712 135380844 -117875739 + MIR SINE MIR 20 170 -92 878 293 49 26 chr2 135380846 135381153 -117875430 + MLT1J1 LTR MaLR 1 314 -132 341 208 0 13 chr2 135381287 135381364 -117875219 + MIR SINE MIR 172 247 -15 320 287 103 61 chr2 135381384 135381694 -117874889 - L1MEd LINE L1 -5778 341 19 272 194 10 39 chr2 135382727 135382830 -117873753 + (TATATG)n Simple_repeat Simple_repeat 3 102 0 215 233 12 47 chr2 135382835 135382921 -117873662 + (CATA)n Simple_repeat Simple_repeat 3 85 0 2739 251 92 14 chr2 135385049 135386178 -117870405 - L1MDa LINE L1 -3893 2647 1562 185 333 13 39 chr2 135386418 135386496 -117870087 + L2 LINE L2 3193 3268 -4 359 226 43 11 chr2 135386646 135386739 -117869844 + L2 LINE L2 3215 3310 -3 591 160 33 80 chr2 135386743 135386893 -117869690 + L1MDa LINE L1 1506 1648 -4892 2111 230 58 0 chr2 135386906 135387476 -117869107 + L1MDa LINE L1 1561 2163 -4377 6904 247 64 25 chr2 135387872 135388364 -117868219 + L1M4 LINE L1 405 877 -5767 2798 98 0 3 chr2 135388364 135388740 -117867843 + THE1C LTR MaLR 1 375 0 6904 247 64 25 chr2 135388740 135389902 -117866681 + L1M4 LINE L1 877 1993 -4651 474 143 51 0 chr2 135389902 135390000 -117866583 + L1MB7 LINE L1 6081 6183 -1 6904 247 64 25 chr2 135390000 135392802 -117863781 + L1M4 LINE L1 1993 5161 -1483 447 103 0 0 chr2 135392948 135393049 -117863534 + AluSc SINE Alu 224 324 0 198 103 0 0 chr2 135393083 135393112 -117863471 + (GGA)n Simple_repeat Simple_repeat 2 30 0 1411 178 59 0 chr2 135393696 135393966 -117862617 - MER70A LTR ERVL 0 472 187 393 263 116 42 chr2 135394352 135394611 -117861972 + LTR33 LTR ERVL 236 513 -8 2337 190 62 10 chr2 135395039 135395730 -117860853 + L1M2 LINE L1 5287 6013 -756 2279 134 59 12 chr2 135396078 135396487 -117860096 + MSTA LTR MaLR 1 428 0 263 49 24 0 chr2 135397467 135397508 -117859075 + (CA)n Simple_repeat Simple_repeat 2 43 0 364 250 83 87 chr2 135397550 135397802 -117858781 + L1M4 LINE L1 4301 4551 -1595 228 200 0 0 chr2 135397868 135397933 -117858650 + A-rich Low_complexity Low_complexity 1 65 0 263 49 24 0 chr2 135398652 135398693 -117857890 + (CA)n Simple_repeat Simple_repeat 2 43 0 469 300 38 4 chr2 135398777 135399040 -117857543 + L1M4 LINE L1 4338 4609 -1537 737 269 131 37 chr2 135399584 135399909 -117856674 + L1MEc LINE L1 22 394 -6002 243 0 0 0 chr2 135399909 135399936 -117856647 + (GA)n Simple_repeat Simple_repeat 1 27 0 737 269 131 37 chr2 135399936 135400015 -117856568 + L1MEc LINE L1 394 464 -5932 815 226 22 63 chr2 135400044 135400238 -117856345 - L1M4 LINE L1 -5362 1180 1006 1512 196 18 66 chr2 135400238 135400631 -117855952 - MLT1A2 LTR MaLR 0 374 1 815 226 22 63 chr2 135400631 135400803 -117855780 - L1M4 LINE L1 -5536 1006 829 432 0 0 0 chr2 135400813 135400861 -117855722 + (CA)n Simple_repeat Simple_repeat 2 49 0 412 243 29 14 chr2 135400908 135401048 -117855535 - L1M4 LINE L1 -5703 943 802 236 335 52 26 chr2 135401340 135401570 -117855013 - L1M4 LINE L1 -6293 249 14 3800 245 78 27 chr2 135401672 135402508 -117854075 - L1M4 LINE L1 -2289 4355 3563 3387 47 2 9 chr2 135402508 135402935 -117853648 - L1PA5 LINE L1 -6 6148 5725 3800 245 78 27 chr2 135402935 135405405 -117851178 - L1M4 LINE L1 -3081 3563 876 918 258 14 43 chr2 135405401 135405746 -117850837 - L1M4 LINE L1 -6152 390 56 * 6878 64 14 6 chr2 135405746 135406861 -117849722 - L1PA5 LINE L1 0 6154 5039 8776 33 3 1 chr2 135406981 135408120 -117848463 - L1PA5 LINE L1 -2318 3828 2688 1927 192 6 3 chr2 135408565 135408930 -117847653 + MER47A DNA MER2_type 1 366 0 2333 218 60 11 chr2 135409964 135410675 -117845908 + L1MB8 LINE L1 4626 5371 -775 4529 146 8 19 chr2 135410676 135411581 -117845002 + THE1C-int LTR MaLR 716 1651 0 2685 112 0 3 chr2 135411581 135411957 -117844626 + THE1C LTR MaLR 1 375 0 1075 188 62 0 chr2 135411961 135412169 -117844414 + MLT1A1 LTR MaLR 138 358 -7 2241 194 22 33 chr2 135412170 135412642 -117843941 + L1MB8 LINE L1 5642 6109 -69 2112 116 0 7 chr2 135412642 135412944 -117843639 + AluSg SINE Alu 1 300 -10 2241 194 22 33 chr2 135412944 135413013 -117843570 + L1MB8 LINE L1 6109 6177 -1 356 320 24 16 chr2 135413325 135413450 -117843133 + MER5B DNA MER1_type 19 144 -34 181 281 49 61 chr2 135413656 135413738 -117842845 - L2 LINE L2 -300 2972 2892 791 190 0 40 chr2 135414325 135414458 -117842125 + L1MA6 LINE L1 5636 5760 -540 3315 204 23 87 chr2 135414458 135415493 -117841090 + LTR5 LTR ERVK 1 969 0 791 190 0 40 chr2 135415493 135415559 -117841024 + L1MA6 LINE L1 5760 5827 -473 600 168 0 0 chr2 135415556 135415669 -117840914 - L1MB2 LINE L1 -194 5977 5865 * 2052 181 67 5 chr2 135415673 135416104 -117840479 - LOR1a LTR ERV1 0 497 40 300 140 0 0 chr2 135416123 135416173 -117840410 - L1MB2 LINE L1 -322 5861 5812 837 175 43 73 chr2 135416175 135416290 -117840293 - L1MB2 LINE L1 -338 5845 5739 1817 144 44 39 chr2 135416290 135416652 -117839931 - THE1B LTR MaLR 0 364 1 837 175 43 73 chr2 135416652 135416770 -117839813 - L1MB2 LINE L1 -444 5739 5619 309 303 25 8 chr2 135416870 135416992 -117839591 - HAL1 LINE L1 -760 1747 1624 355 274 30 37 chr2 135417002 135417166 -117839417 + L1ME2 LINE L1 5744 5906 -258 713 254 10 20 chr2 135417199 135417400 -117839183 - MER82 DNA MER2_type 0 653 455 192 97 0 0 chr2 135417425 135417456 -117839127 + (CAGTG)n Simple_repeat Simple_repeat 1 31 0 218 318 91 23 chr2 135417487 135417619 -117838964 + MIR SINE MIR 48 188 -74 352 259 0 0 chr2 135417651 135417732 -117838851 - MER82 DNA MER2_type -559 94 14 218 203 0 14 chr2 135418185 135418259 -117838324 + (TG)n Simple_repeat Simple_repeat 2 74 0 311 226 212 34 chr2 135418279 135418425 -117838158 + L1MC/D LINE L1 4657 4828 -1318 233 232 40 30 chr2 135418580 135418679 -117837904 - MER94 DNA DNA -2 132 33 386 285 72 23 chr2 135418814 135419035 -117837548 + L1MC/D LINE L1 5318 5549 -2259 288 188 0 0 chr2 135419678 135419747 -117836836 + (CA)n Simple_repeat Simple_repeat 1 69 0 22 0 0 0 chr2 135420355 135420377 -117836206 + AT_rich Low_complexity Low_complexity 1 22 0 304 330 8 0 chr2 135420587 135420705 -117835878 - L1ME4a LINE L1 -4 6117 5999 357 342 80 5 chr2 135521280 135521467 -117735116 - MIR SINE MIR -14 248 48 878 217 96 29 chr2 135521503 135521707 -117734876 + L1MEc LINE L1 608 838 -5558 2122 149 0 0 chr2 135521707 135522003 -117734580 + AluSx SINE Alu 1 296 -16 878 217 96 29 chr2 135522003 135522079 -117734504 + L1MEc LINE L1 838 907 -5489 207 296 45 11 chr2 135522080 135522168 -117734415 + L2 LINE L2 2986 3076 -237 341 111 133 0 chr2 135522176 135522311 -117734272 - L1MA7 LINE L1 -1 6290 6138 2012 125 52 0 chr2 135522839 135523128 -117733455 + AluY SINE Alu 1 304 -7 210 37 0 0 chr2 135523209 135523236 -117733347 + (TC)n Simple_repeat Simple_repeat 1 27 0 252 240 31 52 chr2 135523725 135523821 -117732762 - L1MEc LINE L1 -5959 437 344 542 278 11 17 chr2 135523909 135524089 -117732494 - L1MEc LINE L1 -6180 216 38 646 213 55 24 chr2 135524985 135525238 -117731345 + L1M4 LINE L1 4415 4675 -1471 213 264 71 32 chr2 135526892 135527028 -117729555 - MIR SINE MIR -61 147 38 3713 164 19 20 chr2 135528592 135528741 -117727842 - L1 LINE L1 -901 5245 5097 2279 104 0 3 chr2 135528741 135529029 -117727554 + AluSg1 SINE Alu 1 287 -22 3713 164 19 20 chr2 135529029 135529609 -117726974 - L1 LINE L1 -1049 5097 4517 2105 131 13 0 chr2 135529662 135529960 -117726623 - AluSq SINE Alu -11 302 1 2586 121 7 16 chr2 135531564 135532004 -117724579 + L1PA13 LINE L1 5725 6160 -3 944 169 28 28 chr2 135532004 135532217 -117724366 - LTR37B LTR ERV1 -31 437 225 26 0 0 0 chr2 135532671 135532697 -117723886 + AT_rich Low_complexity Low_complexity 1 26 0 211 289 51 57 chr2 135532991 135533190 -117723393 - MIR SINE MIR -19 189 1 185 324 91 64 chr2 135533319 135533693 -117722890 - L2 LINE L2 -1274 2040 1657 249 237 0 0 chr2 135533910 135533969 -117722614 - MER63 DNA MER1_type -35 1026 968 660 133 7 77 chr2 135533995 135534138 -117722445 + FLAM_C SINE Alu 11 143 0 198 0 0 0 chr2 135534196 135534218 -117722365 + (T)n Simple_repeat Simple_repeat 1 22 0 462 304 133 65 chr2 135534596 135535197 -117721386 + L1MEd LINE L1 21 662 -5457 997 270 70 14 chr2 135535197 135535542 -117721041 + MLT1E3 LTR MaLR 1 364 -260 1709 178 42 6 chr2 135535949 135536281 -117720302 + MER2 DNA MER2_type 1 344 0 2221 116 10 0 chr2 135536395 135536697 -117719886 + AluSq SINE Alu 1 305 -8 1626 219 48 34 chr2 135539692 135540283 -117716300 + L1M1 LINE L1 3060 3662 -3903 492 212 106 20 chr2 135541809 135541960 -117714623 - MLT1E2 LTR MaLR -111 515 352 273 206 219 19 chr2 135541999 135542159 -117714424 + LTR33 LTR ERVL 37 228 -293 2196 114 11 26 chr2 135542373 135542723 -117713860 - LTR39 LTR ERV1 -336 447 103 652 152 0 10 chr2 135542723 135542822 -117713761 - AluS SINE Alu -213 99 2 2400 102 0 10 chr2 135542837 135543151 -117713432 - AluSx SINE Alu -1 311 1 203 200 0 15 chr2 135543266 135543331 -117713252 + (CA)n Simple_repeat Simple_repeat 1 64 0 795 212 15 73 chr2 135543623 135543695 -117712888 + Charlie4a DNA MER1_type 248 323 -1638 1929 158 0 7 chr2 135543695 135543992 -117712591 - AluJb SINE Alu -17 295 1 795 212 15 73 chr2 135543992 135544008 -117712575 + Charlie4a DNA MER1_type 323 338 -1623 1908 145 14 14 chr2 135544008 135544305 -117712278 - AluSx SINE Alu -15 297 1 795 212 15 73 chr2 135544305 135544331 -117712252 + Charlie4a DNA MER1_type 338 364 -1597 2011 136 20 0 chr2 135544331 135544632 -117711951 - AluSx SINE Alu -5 307 1 795 212 15 73 chr2 135544632 135544789 -117711794 + Charlie4a DNA MER1_type 364 505 -3 180 0 0 0 chr2 135545714 135545734 -117710849 + (TAAAA)n Simple_repeat Simple_repeat 3 22 0 590 215 17 0 chr2 135546012 135546167 -117710416 - L1MC/D LINE L1 -730 5436 5314 325 308 111 0 chr2 135546183 135546300 -117710283 - L1MC/D LINE L1 -1235 4911 4782 * 352 238 21 91 chr2 135546286 135546365 -117710218 - L1MC/D LINE L1 -3145 3001 2935 5277 68 14 6 chr2 135546365 135547024 -117709559 - SVA Other Other 0 1386 723 352 238 21 91 chr2 135547024 135547087 -117709496 - L1MC/D LINE L1 -3211 2935 2869 1234 204 8 8 chr2 135547188 135547448 -117709135 + Tigger7 DNA MER2_type 95 354 -196 1006 179 25 0 chr2 135547481 135547682 -117708901 + Tigger7 DNA MER2_type 2280 2485 -2 1175 153 0 27 chr2 135547684 135547832 -117708751 - L1MB7 LINE L1 -261 5923 5781 2094 126 10 3 chr2 135547832 135548125 -117708458 - AluSg SINE Alu -15 295 1 1175 153 0 27 chr2 135548125 135548198 -117708385 - L1MB7 LINE L1 -403 5781 5708 * 1296 270 7 9 chr2 135548192 135548625 -117707958 - L1MC/D LINE L1 -3426 2720 2289 1260 271 77 22 chr2 135548622 135549402 -117707181 - L1M1 LINE L1 -3981 3584 2796 * 1880 124 7 7 chr2 135549510 135549783 -117706800 + AluSx SINE Alu 27 299 -13 755 189 33 147 chr2 135550570 135550877 -117705706 - L1MD2 LINE L1 -5 6354 6083 1197 185 77 22 chr2 135550878 135551239 -117705344 - L1MB7 LINE L1 -743 5403 5221 317 314 39 20 chr2 135552081 135552234 -117704349 + MER106B DNA MER1_type 896 1051 -8 291 272 82 48 chr2 135553342 135553489 -117703094 + L2 LINE L2 2933 3084 -188 414 320 71 27 chr2 135553509 135553846 -117702737 + L2 LINE L2 2284 2635 -679 9313 51 5 2 chr2 135553955 135555618 -117700965 - L1P2 LINE L1 -337 5817 4151 874 176 56 84 chr2 135556719 135556772 -117699811 - L1MB5 LINE L1 -10 6164 6111 2099 133 9 25 chr2 135556772 135557088 -117699495 + AluJb SINE Alu 1 311 -1 874 176 56 84 chr2 135557088 135557284 -117699299 - L1MB5 LINE L1 -63 6111 5922 270 185 19 0 chr2 135557286 135557340 -117699243 + Tigger7 DNA MER2_type 3 57 -282 1259 125 0 19 chr2 135557603 135557819 -117698764 + MER4D LTR ERV1 1 212 -691 2201 127 0 3 chr2 135557822 135558121 -117698462 - AluSx SINE Alu -14 298 1 2486 135 19 12 chr2 135558124 135558554 -117698029 + MER4E LTR ERV1 347 779 0 635 242 15 76 chr2 135559463 135559570 -117697013 - MIR SINE MIR -2 260 169 1940 101 11 8 chr2 135559570 135559837 -117696746 - AluSq SINE Alu -45 268 1 635 242 15 76 chr2 135559837 135559927 -117696656 - MIR SINE MIR -93 169 75 196 242 234 55 chr2 135560327 135560455 -117696128 + MIR SINE MIR 101 251 -11 2387 164 22 0 chr2 135560788 135561196 -117695387 - MLT-int LTR MaLR -1 1734 1318 2513 219 21 10 chr2 135561424 135562043 -117694540 - MLT1-int LTR MaLR -484 887 30 432 237 77 41 chr2 135562045 135562214 -117694369 + LTR39 LTR ERV1 3 177 -606 1654 157 31 50 chr2 135562325 135562643 -117693940 + AluJo SINE Alu 1 312 0 1840 109 0 0 chr2 135562683 135562921 -117693662 + AluSx SINE Alu 1 238 -74 450 296 134 28 chr2 135563137 135563353 -117693230 - MIR SINE MIR -13 249 11 198 306 27 36 chr2 135563615 135563726 -117692857 - MIR SINE MIR -130 132 23 1675 174 42 3 chr2 135564189 135564476 -117692107 + AluJo SINE Alu 1 298 -14 276 323 0 0 chr2 135564847 135564980 -117691603 + C-rich Low_complexity Low_complexity 1 133 0 267 54 0 0 chr2 135564983 135565020 -117691563 + (C)n Simple_repeat Simple_repeat 1 37 0 806 110 8 8 chr2 135565219 135565337 -117691246 + FLAM_C SINE Alu 1 118 -15 21 71 0 0 chr2 135565337 135565379 -117691204 + AT_rich Low_complexity Low_complexity 1 42 0 368 305 66 20 chr2 135565656 135566154 -117690429 + L1MC4a LINE L1 4918 5513 -608 408 249 143 55 chr2 135566332 135566590 -117689993 + L1MC4a LINE L1 5576 5861 -1947 2188 122 3 0 chr2 135566590 135566886 -117689697 - AluSx SINE Alu -15 297 1 408 249 143 55 chr2 135566886 135566900 -117689683 + L1MC4a LINE L1 5861 5872 -1936 5160 146 41 25 chr2 135567099 135568804 -117687779 + L1MA4 LINE L1 4571 6299 -1 930 197 64 9 chr2 135568811 135569029 -117687554 - MLT2B1 LTR ERVL -285 235 6 183 161 32 161 chr2 135569385 135569447 -117687136 + L2 LINE L2 3258 3311 -2 2639 276 40 51 chr2 135570122 135571149 -117685434 + L1M4b LINE L1 24 1039 -5820 462 169 0 0 chr2 135571157 135571240 -117685343 + L1ME LINE L1 5361 5443 -727 9334 75 54 8 chr2 135571345 135572642 -117683941 + SVA Other Other 31 1386 0 1244 90 51 0 chr2 135572766 135572944 -117683639 + AluY SINE Alu 119 305 -6 4382 189 18 3 chr2 135572944 135573878 -117682705 + L1 LINE L1 4384 5331 -815 358 276 41 29 chr2 135574319 135574489 -117682094 - MLT1J1 LTR MaLR -28 418 247 294 279 93 0 chr2 135574829 135574958 -117681625 + L1ME4a LINE L1 5978 6118 -3 3221 128 42 18 chr2 135576798 135577344 -117679239 - LTR39 LTR ERV1 -224 559 1 2275 116 6 25 chr2 135577892 135578210 -117678373 - AluSq SINE Alu -1 312 1 654 209 23 8 chr2 135578769 135578898 -117677685 - AluSg/x SINE Alu -9 303 173 305 179 64 0 chr2 135579038 135579116 -117677467 - L1 LINE L1 -1114 5032 4950 1557 118 5 0 chr2 135579120 135579331 -117677252 - AluSp SINE Alu -6 307 96 1565 226 62 5 chr2 135579334 135579723 -117676860 - MLT1E1 LTR MaLR -243 411 1 2150 144 0 0 chr2 135579732 135580024 -117676559 - AluSx SINE Alu -20 292 1 589 260 52 90 chr2 135580044 135580390 -117676193 - MLT1E1-int LTR MaLR -57 1314 982 343 248 80 40 chr2 135580556 135580681 -117675902 - MLT1E1-int LTR MaLR -507 864 735 813 110 16 0 chr2 135580704 135580831 -117675752 - L1MA6 LINE L1 -24 6276 6148 221 228 54 42 chr2 135581062 135581167 -117675416 + MIR SINE MIR 4 110 -98 1998 161 0 3 chr2 135581574 135581873 -117674710 - AluJb SINE Alu -14 298 1 679 208 31 8 chr2 135581995 135582125 -117674458 - FLAM_A SINE Alu 0 133 1 301 274 62 46 chr2 135584108 135584271 -117672312 - MIR SINE MIR -60 148 9 215 262 24 30 chr2 135584827 135584995 -117671588 + (GGGTG)n Simple_repeat Simple_repeat 1 167 0 240 214 71 0 chr2 135585806 135585876 -117670707 + L1ME4a LINE L1 5964 6038 -83 499 258 23 0 chr2 135586015 135586147 -117670436 - MLT1D LTR MaLR -4 501 367 1464 182 0 30 chr2 135586160 135586429 -117670154 + AluJb SINE Alu 34 294 -18 1194 224 31 4 chr2 135586603 135586858 -117669725 - AluJo SINE Alu -50 262 1 1219 263 86 27 chr2 135586921 135587407 -117669176 - L1MEc LINE L1 -3889 2507 2051 1346 174 4 29 chr2 135587407 135587649 -117668934 - MER46A DNA MER2_type 0 236 1 1219 263 86 27 chr2 135587649 135589019 -117667564 - L1MEc LINE L1 -4345 2051 492 433 352 63 31 chr2 135589793 135590111 -117666472 + L1M4 LINE L1 4853 5180 -966 1590 171 4 0 chr2 135590636 135590917 -117665666 + L1MA5 LINE L1 6019 6300 0 2024 154 9 9 chr2 135590917 135590930 -117665653 + L1PA15 LINE L1 5815 5827 -338 2026 133 20 0 chr2 135590930 135591231 -117665352 + AluSq SINE Alu 1 307 -6 2024 154 9 9 chr2 135591231 135591565 -117665018 + L1PA15 LINE L1 5826 6164 -1 23 0 0 0 chr2 135591580 135591603 -117664980 + AT_rich Low_complexity Low_complexity 1 23 0 1692 138 80 0 chr2 135592350 135592625 -117663958 + MSTA LTR MaLR 132 428 0 4126 161 52 7 chr2 135592629 135592766 -117663817 + MSTA-int LTR MaLR 5 134 -1517 5642 62 21 4 chr2 135592766 135593519 -117663064 - MER4E LTR ERV1 0 766 1 4126 161 52 7 chr2 135593519 135594112 -117662471 + MSTA-int LTR MaLR 134 768 -883 3509 142 5 73 chr2 135594377 135595024 -117661559 - LTR26 LTR ERV1 0 603 1 276 203 0 16 chr2 135597590 135597654 -117658929 - MIR SINE MIR -63 145 83 3373 173 84 9 chr2 135599908 135600578 -117656005 + L1MB7 LINE L1 5455 6174 -10 353 283 29 29 chr2 135600610 135600783 -117655800 - L1MC4a LINE L1 -1971 5837 5665 206 61 0 30 chr2 135601298 135601331 -117655252 + (CA)n Simple_repeat Simple_repeat 2 33 0 1379 217 102 43 chr2 135601978 135602299 -117654284 - LTR44 LTR ERV1 -2 517 217 257 0 30 0 chr2 135602299 135602332 -117654251 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2162 107 4 0 chr2 135602334 135602614 -117653969 - AluSg SINE Alu -29 281 1 1379 217 102 43 chr2 135602614 135602777 -117653806 - LTR44 LTR ERV1 -302 217 1 241 250 7 7 chr2 135602818 135602970 -117653613 + GA-rich Low_complexity Low_complexity 1 152 0 207 327 60 0 chr2 135603337 135603487 -117653096 + L2 LINE L2 2503 2661 -653 273 244 33 0 chr2 135603621 135603711 -117652872 - MER20B DNA MER1_type -148 635 543 264 289 125 36 chr2 135603812 135604116 -117652467 - MER20B DNA MER1_type -438 345 15 208 284 112 62 chr2 135604183 135604504 -117652079 + L2 LINE L2 2872 3208 -105 1463 188 99 14 chr2 135605487 135605849 -117650734 - MSTD LTR MaLR -1 395 3 391 341 53 10 chr2 135607002 135607210 -117649373 - MIR SINE MIR -23 239 23 269 106 85 0 chr2 135607288 135607335 -117649248 + L1P LINE L1 5280 5330 -835 2370 104 0 0 chr2 135607335 135607644 -117648939 + AluSc SINE Alu 1 309 0 6616 156 9 3 chr2 135607666 135608794 -117647789 + L1P LINE L1 4137 5271 -875 648 144 0 29 chr2 135608898 135609037 -117647546 + (TTCC)n Simple_repeat Simple_repeat 3 137 0 322 111 0 0 chr2 135609041 135609086 -117647497 - MER83C LTR ERV1 -108 265 221 1583 246 76 2 chr2 135609087 135609482 -117647101 - L1M3c LINE L1 -4903 1238 815 596 297 186 39 chr2 135609505 135609865 -117646718 - L1M3c LINE L1 -5727 414 2 339 303 74 6 chr2 135609892 135610054 -117646529 - L1MEc LINE L1 -5213 1183 1011 390 314 51 6 chr2 135610188 135610363 -117646220 - L1MEc LINE L1 -5915 290 108 2100 139 0 3 chr2 135610364 135610667 -117645916 - AluSx SINE Alu -10 302 1 251 330 9 19 chr2 135610700 135610806 -117645777 - MIR SINE MIR -64 144 40 374 240 41 16 chr2 135612160 135612281 -117644302 - L2 LINE L2 -804 2510 2387 1823 167 3 3 chr2 135613355 135613648 -117642935 + AluJb SINE Alu 1 293 -19 237 98 0 0 chr2 135614280 135614321 -117642262 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 483 105 116 32 chr2 135614332 135614427 -117642156 - AluSg/x SINE Alu -11 298 196 404 306 39 94 chr2 135615493 135615823 -117640760 + L1MEd LINE L1 615 926 -5193 383 261 70 0 chr2 135615890 135616005 -117640578 + MLT1H1 LTR MaLR 345 467 -88 2080 96 14 0 chr2 135616120 135616402 -117640181 - AluY SINE Alu -20 291 6 384 217 130 0 chr2 135616496 135616611 -117639972 - HsTC2 DNA Tc2 -14 1884 1755 840 292 51 18 chr2 135616871 135617265 -117639318 + HsTC2 DNA Tc2 1304 1886 -12 5677 129 32 13 chr2 135617266 135618160 -117638423 - MER49 LTR ERV1 0 923 12 2216 105 3 3 chr2 135618160 135618455 -117638128 + AluSc SINE Alu 10 304 -5 1631 122 4 4 chr2 135618781 135619027 -117637556 - L1P LINE L1 -1997 4149 3904 2173 110 0 0 chr2 135619063 135619372 -117637211 - AluSx SINE Alu 0 309 1 2472 265 98 55 chr2 135619412 135621253 -117635330 - L1ME LINE L1 -509 5653 3694 2743 102 0 3 chr2 135621253 135621616 -117634967 - THE1B LTR MaLR 0 364 3 2472 265 98 55 chr2 135621616 135621787 -117634796 - L1ME LINE L1 -2468 3694 3532 267 242 57 65 chr2 135621858 135621919 -117634664 - L1ME LINE L1 -2747 3399 3339 1841 160 7 14 chr2 135621919 135622212 -117634371 - AluJb SINE Alu -21 291 1 267 242 57 65 chr2 135622212 135622274 -117634309 - L1ME LINE L1 -2807 3339 3277 473 221 14 16 chr2 135622290 135622402 -117634181 - MLT1I LTR MaLR -286 123 21 865 237 55 88 chr2 135623519 135623751 -117632832 + L1MC4 LINE L1 7549 7787 -255 2266 101 0 3 chr2 135623751 135624049 -117632534 - AluSx SINE Alu -15 297 1 865 237 55 88 chr2 135624049 135624326 -117632257 + L1MC4 LINE L1 7787 8041 -1 307 321 91 33 chr2 135625259 135625623 -117630960 + L1M4 LINE L1 1 385 -6157 3510 215 80 51 chr2 135625680 135626581 -117630002 + L1M4 LINE L1 533 1406 -5240 2091 158 3 0 chr2 135626581 135626892 -117629691 + AluSx SINE Alu 1 312 0 3510 215 80 51 chr2 135626892 135627985 -117628598 + L1M4 LINE L1 1406 2616 -4030 1579 173 14 22 chr2 135628089 135628367 -117628216 + AluJo SINE Alu 24 299 -13 3676 225 37 7 chr2 135628369 135629397 -117627186 + L1M4 LINE L1 2871 3929 -2715 1016 154 0 0 chr2 135629400 135629556 -117627027 - MLT1B LTR MaLR -4 386 231 6159 213 34 29 chr2 135629693 135631328 -117625255 + L1M4 LINE L1 3927 5570 -1074 642 138 41 8 chr2 135631328 135631451 -117625132 + L1MB5 LINE L1 6048 6174 0 418 211 81 8 chr2 135632836 135632959 -117623624 + MER94 DNA DNA 2 133 -1 578 256 95 66 chr2 135634033 135634455 -117622128 + MLT1J1 LTR MaLR 11 444 -2 189 402 18 9 chr2 135634599 135634711 -117621872 - MIR SINE MIR -62 146 34 29 47 0 0 chr2 135636115 135636158 -117620425 + AT_rich Low_complexity Low_complexity 1 43 0 1179 141 5 0 chr2 135636177 135636362 -117620221 - L1MA3 LINE L1 0 6305 6120 508 99 49 0 chr2 135636398 135636479 -117620104 - L1MA3 LINE L1 -175 6130 6046 376 38 57 0 chr2 135636480 135636533 -117620050 - L1PB2 LINE L1 -6 6145 6090 376 38 57 0 chr2 135636547 135636600 -117619983 - L1PB2 LINE L1 -6 6145 6090 2504 80 3 0 chr2 135636600 135636922 -117619661 - L1PA7 LINE L1 0 6154 5827 2204 132 7 3 chr2 135636930 135637240 -117619343 - AluSx SINE Alu -1 311 1 1969 110 22 16 chr2 135637241 135637560 -117619023 - L1PB1 LINE L1 -45 6106 5786 278 330 87 0 chr2 135638049 135638164 -117618419 + MIR SINE MIR 35 159 -103 4828 207 43 45 chr2 135638669 135639865 -117616718 - L1MC4a LINE L1 0 7808 6615 1038 211 24 0 chr2 135639858 135640066 -117616517 + L1MC4a LINE L1 6398 6610 -1198 * 362 183 73 24 chr2 135640070 135640167 -117616416 + L1ME3A LINE L1 5601 5702 -468 1821 163 14 3 chr2 135640174 135640468 -117616115 + AluJo SINE Alu 12 308 -4 499 103 35 0 chr2 135640472 135640559 -117616024 + GA-rich Low_complexity Low_complexity 2 91 0 634 239 162 19 chr2 135640570 135640878 -117615705 + L1ME3A LINE L1 5699 6097 -73 197 122 49 0 chr2 135641082 135641123 -117615460 + T-rich Low_complexity Low_complexity 3 45 0 2153 117 6 19 chr2 135641125 135641441 -117615142 - AluSx SINE Alu 0 312 1 578 224 114 28 chr2 135641443 135641733 -117614850 - L1M4 LINE L1 -1590 4556 4242 843 251 35 5 chr2 135641961 135642230 -117614353 - L1 LINE L1 -793 5353 5077 273 285 62 23 chr2 135642232 135642362 -117614221 - MER58C DNA MER1_type 0 215 81 355 231 50 16 chr2 135642427 135642548 -117614035 - L1 LINE L1 -1718 4428 4304 4164 174 19 20 chr2 135642609 135643454 -117613129 - L1MA6 LINE L1 -6 6294 5451 2046 125 14 7 chr2 135643592 135643888 -117612695 - AluSx SINE Alu -14 298 1 477 205 0 0 chr2 135643909 135644021 -117612562 + T-rich Low_complexity Low_complexity 1 112 0 324 216 14 0 chr2 135644226 135644300 -117612283 + MER105 DNA DNA 7 81 -123 1511 194 48 0 chr2 135644351 135644471 -117612112 + AluJb SINE Alu 1 114 -198 195 42 0 0 chr2 135644471 135644495 -117612088 + (TAA)n Simple_repeat Simple_repeat 2 25 0 1511 194 48 0 chr2 135644495 135644668 -117611915 + AluJb SINE Alu 114 308 -4 1057 246 50 13 chr2 135644689 135644990 -117611593 - LTR37A LTR ERV1 -114 312 1 2038 125 17 0 chr2 135645317 135645606 -117610977 + AluSg SINE Alu 1 294 -16 21 0 0 0 chr2 135645606 135645627 -117610956 + AT_rich Low_complexity Low_complexity 1 21 0 2473 71 0 13 chr2 135645631 135645942 -117610641 + AluSq SINE Alu 5 311 -2 321 306 50 28 chr2 135645965 135646145 -117610438 - MER31-int LTR ERV1 -2285 2651 2468 21 71 0 0 chr2 135646188 135646230 -117610353 + AT_rich Low_complexity Low_complexity 1 42 0 35 24 0 0 chr2 135646262 135646304 -117610279 + AT_rich Low_complexity Low_complexity 1 42 0 25 0 0 0 chr2 135646382 135646407 -117610176 + AT_rich Low_complexity Low_complexity 1 25 0 1622 125 0 0 chr2 135646407 135646631 -117609952 + AluSg/x SINE Alu 82 305 -5 248 250 25 50 chr2 135646692 135646772 -117609811 + Charlie1a DNA MER1_type 53 130 -1325 1923 134 3 3 chr2 135646821 135647113 -117609470 + AluSx SINE Alu 3 294 -18 359 208 50 17 chr2 135647140 135647260 -117609323 + Charlie1a DNA MER1_type 1303 1426 -29 1761 152 45 0 chr2 135647380 135647670 -117608913 + AluSx SINE Alu 3 305 -7 2187 106 7 3 chr2 135647974 135648267 -117608316 + AluSx SINE Alu 1 294 -18 2017 128 7 3 chr2 135648269 135648557 -117608026 + AluSq SINE Alu 1 289 -24 1027 124 12 12 chr2 135648572 135648733 -117607850 + BC200 scRNA scRNA 1 161 -39 1985 138 3 7 chr2 135648918 135649214 -117607369 - AluSx SINE Alu -17 295 1 638 286 90 56 chr2 135649448 135649661 -117606922 - L1MC/D LINE L1 -2090 5718 5514 2339 108 3 0 chr2 135649661 135649967 -117606616 - AluSp SINE Alu -6 307 1 638 286 90 56 chr2 135649967 135650029 -117606554 - L1MC/D LINE L1 -2294 5514 5456 1889 116 7 36 chr2 135650029 135650069 -117606514 - AluSc SINE Alu 0 309 269 203 0 0 36 chr2 135650069 135650097 -117606486 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1889 116 7 36 chr2 135650097 135650357 -117606226 - AluSc SINE Alu -40 269 18 638 286 90 56 chr2 135650357 135650524 -117606059 - L1MC/D LINE L1 -2352 5456 5260 208 255 104 57 chr2 135650896 135651002 -117605581 - MIR SINE MIR -69 193 83 261 0 0 0 chr2 135651108 135651137 -117605446 + (A)n Simple_repeat Simple_repeat 1 29 0 2159 110 3 3 chr2 135651137 135651427 -117605156 + AluSq SINE Alu 1 290 -23 183 80 0 0 chr2 135651538 135651563 -117605020 + (GAA)n Simple_repeat Simple_repeat 3 27 0 2037 55 47 0 chr2 135651970 135652224 -117604359 + AluY SINE Alu 42 307 -4 377 240 32 56 chr2 135652234 135652359 -117604224 + MIR SINE MIR 25 146 -62 2099 98 3 13 chr2 135653391 135653697 -117602886 - AluY SINE Alu -8 303 1 911 85 15 0 chr2 135653706 135653836 -117602747 - AluY SINE Alu -179 132 1 1618 164 14 14 chr2 135655020 135655300 -117601283 + AluJo SINE Alu 11 290 -22 252 247 90 45 chr2 135656017 135656106 -117600477 + L2 LINE L2 3115 3207 -65 192 306 48 0 chr2 135657966 135658028 -117598555 + L2 LINE L2 3206 3270 -2 456 325 70 84 chr2 135659212 135659714 -117596869 - HAL1 LINE L1 -1078 1429 935 1765 145 27 7 chr2 135660444 135660740 -117595843 - AluJo SINE Alu -10 302 1 213 196 143 0 chr2 135660767 135660823 -117595760 + MIR SINE MIR 122 185 -77 480 171 0 39 chr2 135661284 135661413 -117595170 + CT-rich Low_complexity Low_complexity 1 124 0 233 252 2 20 chr2 135661416 135661476 -117595107 + polypyrimidine Low_complexity Low_complexity 5 43 0 1451 108 0 0 chr2 135661477 135661663 -117594920 - AluSx SINE Alu -93 219 34 282 135 11 157 chr2 135661663 135661714 -117594869 - L1 LINE L1 -1491 4655 4620 2164 95 3 0 chr2 135661714 135662049 -117594534 - AluSp SINE Alu 0 336 1 282 135 11 157 chr2 135662049 135662085 -117594498 - L1 LINE L1 -1526 4620 4580 300 351 53 12 chr2 135662260 135662431 -117594152 - L1MC/D LINE L1 -480 5853 5676 340 305 0 0 chr2 135663729 135663811 -117592772 + L2 LINE L2 3191 3272 0 2407 168 80 39 chr2 135664009 135664498 -117592085 + LTR22 LTR ERVK 1 509 0 235 289 31 10 chr2 135664995 135665092 -117591491 + MLT-int LTR MaLR 1615 1713 -22 1651 64 2 2 chr2 135665227 135665531 -117591052 + L1ME LINE L1 5193 5496 -686 2172 122 0 0 chr2 135665639 135665935 -117590648 - AluSc SINE Alu -13 296 1 409 181 21 0 chr2 135667110 135667204 -117589379 + CT-rich Low_complexity Low_complexity 2 97 0 3312 74 0 0 chr2 135667579 135667983 -117588600 - L1PA6 LINE L1 -2 6152 5749 2227 103 3 0 chr2 135668139 135668430 -117588153 - AluSx SINE Alu -7 305 14 477 266 45 7 chr2 135668435 135668589 -117587994 + L1ME LINE L1 5511 5670 -451 2071 99 10 60 chr2 135669135 135669449 -117587134 - AluSx SINE Alu -14 298 1 2185 101 7 3 chr2 135669543 135669841 -117586742 + AluY SINE Alu 1 299 -12 1856 135 32 39 chr2 135670617 135670928 -117585655 - AluSx SINE Alu -3 309 1 317 173 0 0 chr2 135671724 135671776 -117584807 + MER91B DNA MER1_type 79 130 -60 3462 165 8 8 chr2 135672005 135672532 -117584051 + MER1A DNA MER1_type 1 527 0 24552 54 3 11 chr2 135678597 135681671 -117574912 - L1P LINE L1 -3097 3049 3 2275 96 0 0 chr2 135682198 135682490 -117574093 + AluSq SINE Alu 16 307 -6 3291 47 3 0 chr2 135683287 135683668 -117572915 - L1PA6 LINE L1 -3 6151 5770 815 209 0 0 chr2 135685082 135685254 -117571329 - L1 LINE L1 -1603 4543 4372 2251 117 0 19 chr2 135686174 135686490 -117570093 + AluSg SINE Alu 1 310 0 360 64 0 0 chr2 135686839 135686886 -117569697 + (TA)n Simple_repeat Simple_repeat 1 47 0 301 353 58 46 chr2 135687249 135687422 -117569161 - MER5A DNA MER1_type -3 186 1 430 228 20 30 chr2 135687432 135687533 -117569050 + MIR SINE MIR 20 119 -143 380 20 0 20 chr2 135688258 135688308 -117568275 + (TG)n Simple_repeat Simple_repeat 2 50 0 361 129 29 0 chr2 135688594 135688664 -117567919 + CT-rich Low_complexity Low_complexity 1 72 0 409 273 123 7 chr2 135688955 135689109 -117567474 + MLT1J1 LTR MaLR 250 421 -25 244 331 104 0 chr2 135689439 135689593 -117566990 - MIR SINE MIR -6 256 87 1228 160 3 145 chr2 135690725 135691069 -117565514 + AluJo SINE Alu 1 295 -17 1699 190 10 3 chr2 135691130 135691430 -117565153 + AluJo SINE Alu 3 304 -8 262 261 22 112 chr2 135691829 135691963 -117564620 + L2 LINE L2 3179 3300 -13 237 298 53 30 chr2 135692017 135692099 -117564484 - L1MEd LINE L1 -5955 164 76 1846 139 3 30 chr2 135692099 135692402 -117564181 - AluSq SINE Alu -18 295 1 237 298 53 30 chr2 135692402 135692450 -117564133 - L1MEd LINE L1 -6043 76 31 492 136 86 0 chr2 135692453 135692534 -117564049 - MER58B DNA MER1_type 0 341 254 21 0 0 0 chr2 135692575 135692596 -117563987 + AT_rich Low_complexity Low_complexity 1 21 0 563 283 134 14 chr2 135692703 135692926 -117563657 - MIR SINE MIR -6 256 7 1766 141 0 0 chr2 135693899 135694148 -117562435 + AluSg1 SINE Alu 3 251 -58 941 236 50 0 chr2 135694173 135694372 -117562211 + MER3 DNA MER1_type 1 209 0 1336 155 15 131 chr2 135694665 135694933 -117561650 - MER7A DNA MER2_type -2697 341 120 2251 102 7 0 chr2 135694933 135695236 -117561347 + AluSx SINE Alu 1 305 -7 1336 155 15 131 chr2 135695236 135695302 -117561281 - MER7A DNA MER2_type -2918 120 48 209 56 0 28 chr2 135695793 135695829 -117560754 + (CAAAA)n Simple_repeat Simple_repeat 5 39 0 17913 22 6 0 chr2 135695879 135697891 -117558692 + HERVK LTR ERVK 5125 7148 -95 471 63 11 168 chr2 135697891 135697986 -117558597 + SVA Other Other 857 936 -450 8409 50 8 0 chr2 135697986 135698947 -117557636 + LTR5 LTR ERVK 1 969 0 2362 115 0 0 chr2 135699978 135700290 -117556293 - AluSx SINE Alu 0 312 1 1668 158 19 22 chr2 135700554 135700877 -117555706 + L1 LINE L1 4250 4571 -1575 1698 71 18 5 chr2 135701842 135702066 -117554517 - L1P2 LINE L1 -486 5668 5442 289 61 20 20 chr2 135702466 135702515 -117554068 + (CA)n Simple_repeat Simple_repeat 2 50 0 25 31 0 0 chr2 135703261 135703293 -117553290 + AT_rich Low_complexity Low_complexity 1 32 0 3252 129 24 13 chr2 135703889 135704424 -117552159 + L1MC1 LINE L1 5536 6076 -257 817 295 106 9 chr2 135704468 135704807 -117551776 + L2 LINE L2 1194 1565 -1749 1927 175 71 29 chr2 135704819 135705350 -117551233 - MLT2A2 LTR ERVL 0 554 1 238 347 0 28 chr2 135705350 135705494 -117551089 + L2 LINE L2 1573 1712 -1602 290 306 120 0 chr2 135705675 135705891 -117550692 + L1P5 LINE L1 5293 5534 -622 503 297 15 20 chr2 135706412 135706607 -117549976 + L1MEc LINE L1 108 301 -6095 794 143 0 0 chr2 135707009 135707128 -117549455 - AluSg/x SINE Alu 0 310 192 1997 109 60 0 chr2 135707275 135707560 -117549023 - AluSx SINE Alu -10 302 1 333 172 0 0 chr2 135707765 135707829 -117548754 + (CATATA)n Simple_repeat Simple_repeat 3 66 0 5575 83 50 8 chr2 135707939 135708732 -117547851 + L1PA8A LINE L1 5305 6131 0 458 227 40 68 chr2 135708929 135709105 -117547478 + MER31-int LTR ERV1 3562 3732 -2866 264 30 0 0 chr2 135709157 135709190 -117547393 + (TG)n Simple_repeat Simple_repeat 2 34 0 524 290 35 46 chr2 135709245 135709724 -117546859 + MER31-int LTR ERV1 2468 4545 -335 799 221 47 14 chr2 135709738 135709951 -117546632 + MER65C LTR ERV1 242 461 0 201 314 88 41 chr2 135713803 135713997 -117542586 + MIR SINE MIR 48 250 -12 2337 139 6 19 chr2 135714215 135714581 -117542002 - MER46B DNA MER2_type 0 236 1 1811 275 88 39 chr2 135715788 135716795 -117539788 + L2 LINE L2 2256 3313 0 321 361 25 79 chr2 135716856 135717097 -117539486 - L2 LINE L2 -1 3271 3044 286 346 84 17 chr2 135717148 135717327 -117539256 - MIR SINE MIR -2 260 70 224 275 116 0 chr2 135717354 135717423 -117539160 + L2 LINE L2 3193 3269 -44 216 333 12 25 chr2 135717432 135717513 -117539070 - MIR SINE MIR -176 86 7 387 235 84 39 chr2 135717551 135717730 -117538853 + L1M4 LINE L1 2833 3019 -3127 304 261 87 65 chr2 135718008 135718094 -117538489 + L1M4 LINE L1 3105 3188 -2958 2257 108 3 16 chr2 135718094 135718409 -117538174 + AluSp SINE Alu 1 311 -2 304 261 87 65 chr2 135718409 135718827 -117537756 + L1M4 LINE L1 3188 3620 -2526 337 281 0 10 chr2 135718833 135718929 -117537654 + L1M4 LINE L1 3747 3841 -2305 * 793 269 73 35 chr2 135718927 135719013 -117537570 + L1M4 LINE L1 4055 4136 -2010 1882 95 4 0 chr2 135719013 135719254 -117537329 + AluY SINE Alu 1 242 -69 793 269 73 35 chr2 135719254 135719620 -117536963 + L1M4 LINE L1 4136 4524 -1622 203 337 56 0 chr2 135720243 135720332 -117536251 + MER5A DNA MER1_type 1 94 -95 288 190 290 10 chr2 135720607 135720707 -117535876 - MER97b DNA MER1_type? -880 173 46 500 86 0 14 chr2 135723135 135723205 -117533378 + L1PA6 LINE L1 6075 6143 -11 1437 266 29 5 chr2 135723314 135723728 -117532855 - MSTA-int LTR MaLR -1192 459 36 611 172 164 8 chr2 135723734 135723868 -117532715 + MST-int LTR MaLR 507 661 -990 1138 209 64 11 chr2 135723933 135724215 -117532368 - MSTA LTR MaLR -56 372 76 422 229 10 0 chr2 135724219 135724315 -117532268 + THE1-int LTR MaLR 907 1003 -577 3072 134 16 0 chr2 135725684 135726177 -117530406 - L1P LINE L1 -1091 5055 4555 6462 95 15 3 chr2 135726203 135727297 -117529286 + L1PA4 LINE L1 5051 6154 -1 237 135 0 0 chr2 135727330 135727382 -117529201 + (T)n Simple_repeat Simple_repeat 1 52 0 2429 168 161 15 chr2 135727467 135728014 -117528569 - MER4-int LTR ERV1 -5943 655 29 2692 196 24 5 chr2 135728015 135728566 -117528017 - L1PA13 LINE L1 -3745 3052 2492 1147 269 108 20 chr2 135728585 135728927 -117527656 - L1PA13 LINE L1 -5934 853 482 474 127 0 14 chr2 135728947 135729018 -117527565 + L1PA12 LINE L1 1261 1330 -6251 382 240 0 0 chr2 135729028 135729103 -117527480 + L1PA12 LINE L1 1256 1330 -6244 7386 184 51 7 chr2 135729204 135730533 -117526050 - L1PA12 LINE L1 -5577 2004 617 30 27 0 0 chr2 135733736 135733773 -117522810 + AT_rich Low_complexity Low_complexity 1 37 0 2266 101 7 0 chr2 135736373 135736669 -117519914 + AluSc SINE Alu 1 298 -11 2022 109 11 0 chr2 135737575 135737886 -117518697 - AluSq SINE Alu 0 330 17 1916 159 0 10 chr2 135738212 135738501 -117518082 + AluJo SINE Alu 1 286 -26 250 239 17 120 chr2 135739197 135739314 -117517269 + L2 LINE L2 3115 3219 -53 1477 162 83 4 chr2 135739882 135740160 -117516423 + AluSq SINE Alu 1 300 -13 242 279 110 57 chr2 135740611 135740785 -117515798 + MER5A DNA MER1_type 7 188 -1 308 128 0 128 chr2 135740896 135740990 -117515593 - L1PA4 LINE L1 -111 6044 5963 228 269 0 13 chr2 135742574 135742652 -117513931 + HSAT5 Satellite Satellite 9 85 -1 711 93 0 35 chr2 135742667 135743430 -117513153 + HSAT5 Satellite Satellite 1 736 0 244 271 0 12 chr2 135743446 135743531 -117513052 + HSAT5 Satellite Satellite 1 84 -2 363 220 0 12 chr2 135743591 135743690 -117512893 + HSAT5 Satellite Satellite 1 97 -3 301 195 24 24 chr2 135743949 135744031 -117512552 + HSAT5 Satellite Satellite 3 84 -2 427 293 79 6 chr2 135744042 135744206 -117512377 - MSTA LTR MaLR -154 274 99 740 216 195 4 chr2 135744229 135744465 -117512118 + MST-int LTR MaLR 976 1256 -395 282 196 18 0 chr2 135744453 135744509 -117512074 - THE1-int LTR MaLR -613 967 911 * 499 179 21 0 chr2 135744606 135744701 -117511882 - MSTA LTR MaLR -331 97 1 1389 213 15 41 chr2 135744701 135745044 -117511539 - MSTA-int LTR MaLR 0 1651 1318 249 309 49 0 chr2 135745051 135745132 -117511451 - MSTA LTR MaLR -269 159 75 461 222 10 0 chr2 135745184 135745283 -117511300 - MSTA LTR MaLR -328 100 1 2497 226 72 31 chr2 135745283 135746031 -117510552 - MSTA-int LTR MaLR 0 1651 873 370 192 55 0 chr2 135746032 135746105 -117510478 - MSTA LTR MaLR -257 171 95 667 215 189 21 chr2 135746128 135746361 -117510222 + THE1-int LTR MaLR 907 1178 -402 234 208 19 0 chr2 135746359 135746412 -117510171 - MSTA-int LTR MaLR -613 967 914 * 463 149 9 47 chr2 135746501 135746608 -117509975 - MSTA LTR MaLR -325 103 1 1266 218 15 44 chr2 135746608 135746948 -117509635 - MSTA-int LTR MaLR 0 1651 1322 298 266 0 0 chr2 135746959 135747023 -117509560 - MSTA LTR MaLR -269 159 96 432 186 31 0 chr2 135747101 135747198 -117509385 - MSTA LTR MaLR -328 100 1 5072 234 63 21 chr2 135747198 135748748 -117507835 - MSTA-int LTR MaLR 0 1651 36 553 172 164 8 chr2 135748754 135748888 -117507695 + MST-int LTR MaLR 507 661 -990 1029 209 64 11 chr2 135748953 135749235 -117507348 - MSTA LTR MaLR -56 372 76 391 229 10 0 chr2 135749239 135749335 -117507248 + THE1-int LTR MaLR 907 1003 -577 3326 92 6 0 chr2 135750577 135751058 -117505525 - L1PA7 LINE L1 -164 5990 5507 879 78 0 0 chr2 135751086 135751202 -117505381 + L1PA7 LINE L1 6033 6148 -6 418 332 0 4 chr2 135751756 135751910 -117504673 + MIR SINE MIR 7 155 -67 364 235 25 0 chr2 135751941 135752022 -117504561 - LTR16C LTR ERVL 0 491 409 * 977 284 16 0 chr2 135752012 135752325 -117504258 - LTR16C LTR ERVL -28 463 146 453 50 0 0 chr2 135752429 135752489 -117504094 + (CA)n Simple_repeat Simple_repeat 2 61 0 2894 142 26 10 chr2 135757989 135758488 -117498095 - MER1A DNA MER1_type -5 524 18 4288 198 36 6 chr2 135758708 135760336 -117496247 + L1PA15 LINE L1 4109 5791 -363 180 222 0 37 chr2 135760336 135760417 -117496166 + (TA)n Simple_repeat Simple_repeat 1 78 0 1577 157 39 33 chr2 135760443 135760780 -117495803 - THE1C LTR MaLR -32 343 5 1891 132 54 0 chr2 135761692 135761972 -117494611 + AluSx SINE Alu 1 295 -17 351 311 138 50 chr2 135762234 135762494 -117494089 - L2 LINE L2 0 3313 3031 2382 301 87 42 chr2 135762851 135763688 -117492895 - L2 LINE L2 -273 3040 2132 2111 126 3 0 chr2 135763688 135763982 -117492601 + AluSx SINE Alu 1 295 -17 2382 301 87 42 chr2 135763982 135764355 -117492228 - L2 LINE L2 -1181 2132 1777 461 214 10 10 chr2 135764939 135765037 -117491546 + MER58A DNA MER1_type 1 98 -9 891 195 13 0 chr2 135765052 135765206 -117491377 + AluJb SINE Alu 134 289 -23 402 167 0 0 chr2 135765213 135765279 -117491304 + MER58A DNA MER1_type 159 224 0 1862 168 12 0 chr2 135765876 135766204 -117490379 + L1PA15 LINE L1 5821 6152 -13 33 80 0 0 chr2 135767132 135767207 -117489376 + AT_rich Low_complexity Low_complexity 1 75 0 2337 84 3 0 chr2 135768266 135768565 -117488018 - AluY SINE Alu -11 300 1 478 222 109 49 chr2 135769243 135769509 -117487074 - AluYa5 SINE Alu -19 282 1 767 221 50 50 chr2 135771578 135771777 -117484806 + MER58A DNA MER1_type 23 221 -3 198 316 53 0 chr2 135771782 135771858 -117484725 + L2 LINE L2 2677 2756 -558 558 285 189 11 chr2 135771862 135772238 -117484345 + MLT1L LTR MaLR 5 447 -168 22 0 0 0 chr2 135773192 135773214 -117483369 + AT_rich Low_complexity Low_complexity 1 22 0 212 256 0 0 chr2 135773244 135773283 -117483300 + MER91 DNA MER1_type 91 129 -61 3147 165 8 8 chr2 135773513 135774040 -117482543 + MER1A DNA MER1_type 1 527 0 222 341 105 0 chr2 135774422 135774543 -117482040 + MIR SINE MIR 57 146 -62 719 108 81 0 chr2 135775313 135775450 -117481133 + AluSg/x SINE Alu 166 311 0 22 0 0 0 chr2 135775550 135775572 -117481011 + AT_rich Low_complexity Low_complexity 1 22 0 2034 101 49 3 chr2 135775659 135775947 -117480636 - AluY SINE Alu -10 301 1 401 289 138 50 chr2 135776004 135776264 -117480319 - L2 LINE L2 0 3313 3031 2282 302 132 17 chr2 135776542 135777293 -117479290 - L2 LINE L2 -269 3044 2105 2185 130 0 0 chr2 135777293 135777594 -117478989 + AluSx SINE Alu 1 301 -11 2282 302 132 17 chr2 135777594 135777966 -117478617 - L2 LINE L2 -1208 2105 1777 25 65 0 0 chr2 135778071 135778117 -117478466 + AT_rich Low_complexity Low_complexity 1 46 0 27 49 0 0 chr2 135778395 135778436 -117478147 + AT_rich Low_complexity Low_complexity 1 41 0 490 155 31 21 chr2 135778568 135778665 -117477918 + MER58A DNA MER1_type 1 98 -9 962 200 0 0 chr2 135778678 135778838 -117477745 + AluJb SINE Alu 132 291 -21 407 154 0 0 chr2 135778846 135778911 -117477672 + MER58A DNA MER1_type 160 224 0 337 284 208 52 chr2 135779331 135779533 -117477050 - L1MC/D LINE L1 -2046 5762 5593 1793 179 9 14 chr2 135779533 135779880 -117476703 + L1PA15 LINE L1 5821 6165 0 337 284 208 52 chr2 135779880 135780004 -117476579 - L1MC/D LINE L1 -2215 5593 5385 198 328 8 66 chr2 135780932 135781054 -117475529 - MIR3 SINE MIR -4 204 90 42 65 0 0 chr2 135781468 135781545 -117475038 + AT_rich Low_complexity Low_complexity 1 77 0 28 48 0 0 chr2 135782469 135782511 -117474072 + AT_rich Low_complexity Low_complexity 1 42 0 29 60 0 0 chr2 135782581 135782631 -117473952 + AT_rich Low_complexity Low_complexity 1 50 0 23 33 0 0 chr2 135782707 135782737 -117473846 + AT_rich Low_complexity Low_complexity 1 30 0 1188 203 137 53 chr2 135783119 135783611 -117472972 + LTR61 LTR ERV1 1 595 0 2039 146 7 7 chr2 135783723 135784032 -117472551 - AluSc SINE Alu 0 309 1 845 220 47 47 chr2 135786129 135786343 -117470240 + MER58A DNA MER1_type 8 221 -3 216 275 58 0 chr2 135786348 135786417 -117470166 + L2 LINE L2 2677 2749 -565 559 297 180 10 chr2 135786423 135786807 -117469776 + MLT1L LTR MaLR 1 449 -166 320 173 0 0 chr2 135787804 135787856 -117468727 + MER91B DNA MER1_type 79 130 -60 3184 165 9 8 chr2 135788085 135788611 -117467972 + MER1A DNA MER1_type 1 527 0 296 371 53 0 chr2 135788993 135789144 -117467439 + MIR SINE MIR 57 215 -47 559 189 9 9 chr2 135789837 135789943 -117466640 - U6 snRNA snRNA -1 106 1 359 319 90 12 chr2 135791764 135791977 -117464606 - MIR SINE MIR -28 234 7 255 282 90 13 chr2 135793028 135793106 -117463477 + L2 LINE L2 3139 3222 -50 21 57 0 0 chr2 135793238 135793273 -117463310 + AT_rich Low_complexity Low_complexity 1 35 0 1263 168 172 16 chr2 135793730 135793986 -117462597 + AluJb SINE Alu 1 296 -6 763 155 0 0 chr2 135794143 135794294 -117462289 - FLAM_A SINE Alu 0 151 1 624 284 102 50 chr2 135796141 135796390 -117460193 + MIR SINE MIR 3 259 -3 320 274 71 18 chr2 135796487 135796655 -117459928 + MER104 DNA Tc2 3 179 -1 2509 132 13 10 chr2 135796973 135797368 -117459215 - L1PA12 LINE L1 0 6168 5773 192 369 36 0 chr2 135798292 135798376 -117458207 - MIR SINE MIR -59 203 117 254 259 78 52 chr2 135798751 135798867 -117457716 - MIR3 SINE MIR -21 187 69 1666 138 0 8 chr2 135799009 135799262 -117457321 - AluSc SINE Alu -58 251 1 377 274 104 24 chr2 135799317 135799481 -117457102 - MIR SINE MIR -84 178 2 257 210 0 65 chr2 135799785 135799847 -117456736 + MER81 DNA DNA 1 58 -56 808 144 15 0 chr2 135799869 135800001 -117456582 - AluSg/x SINE Alu 0 312 179 1527 199 64 51 chr2 135800638 135801029 -117455554 - MSTD LTR MaLR 0 396 1 388 277 0 64 chr2 135801470 135801611 -117454972 + MIR SINE MIR 86 217 -45 188 262 24 0 chr2 135801682 135801724 -117454859 + MER5C DNA MER1_type 4 46 -278 2437 151 69 129 chr2 135802681 135803207 -117453376 - L1MA10 LINE L1 0 6334 5778 270 0 0 0 chr2 135803207 135803237 -117453346 + (TG)n Simple_repeat Simple_repeat 1 30 0 2437 151 69 129 chr2 135803237 135803324 -117453259 - L1MA10 LINE L1 -556 5778 5687 356 39 0 20 chr2 135803324 135803375 -117453208 + (TA)n Simple_repeat Simple_repeat 2 51 0 2437 151 69 129 chr2 135803375 135803574 -117453009 - L1MA10 LINE L1 -647 5687 5570 411 268 123 55 chr2 135803702 135803922 -117452661 + MIR SINE MIR 19 253 -9 1817 126 11 0 chr2 135804544 135804856 -117451727 + AluSx SINE Alu 1 315 0 2663 271 181 27 chr2 135806097 135807537 -117449046 + L1MEc LINE L1 40 1700 -4696 263 375 0 10 chr2 135808527 135808623 -117447960 - MIR SINE MIR -76 132 38 1365 191 10 33 chr2 135808803 135809102 -117447481 - L1MB7 LINE L1 -16 6168 5877 3186 116 64 4 chr2 135809105 135809655 -117446928 - L1PBa LINE L1 -4239 2624 2042 297 297 61 54 chr2 135810193 135810341 -117446242 + MIR SINE MIR 77 225 -37 350 269 19 19 chr2 135810366 135810470 -117446113 + LTR33 LTR ERVL 114 217 -304 1697 96 17 4 chr2 135810516 135810755 -117445828 - AluSp SINE Alu -71 242 1 395 254 35 0 chr2 135810763 135810877 -117445706 + LTR33 LTR ERVL 399 516 -5 208 297 47 16 chr2 135811787 135811851 -117444732 + MIR SINE MIR 111 176 -86 2884 174 30 96 chr2 135813370 135814245 -117442338 + L1 LINE L1 4506 5322 -824 1989 117 23 0 chr2 135815822 135816121 -117440462 - AluY SINE Alu -5 306 1 1490 259 60 19 chr2 135816511 135816994 -117439589 - L1ME3A LINE L1 -12 6158 5656 2209 88 17 0 chr2 135819547 135819844 -117436739 + AluSp SINE Alu 1 302 -11 206 203 14 43 chr2 135819883 135819952 -117436631 + G-rich Low_complexity Low_complexity 5 71 0 760 295 157 5 chr2 135822896 135823266 -117433317 - MLT1J LTR MaLR -85 426 1 388 295 162 64 chr2 135824125 135824559 -117432024 - L1ME4a LINE L1 -169 5952 5562 2160 122 0 3 chr2 135824559 135824863 -117431720 - AluSg SINE Alu -7 303 1 388 295 162 64 chr2 135824863 135825038 -117431545 - L1ME4a LINE L1 -559 5562 5274 1973 108 3 7 chr2 135825038 135825326 -117431257 + AluSg1 SINE Alu 1 287 -22 2109 75 27 10 chr2 135825789 135826081 -117430502 - AluY SINE Alu -14 297 1 196 27 54 27 chr2 135827514 135827551 -117429032 + (CAAGC)n Simple_repeat Simple_repeat 4 41 0 690 143 8 0 chr2 135828240 135828359 -117428224 + L1PB1 LINE L1 6029 6148 -3 1782 215 68 53 chr2 135828399 135829000 -117427583 - L1MB8 LINE L1 0 6178 5569 1767 190 74 60 chr2 135828984 135829626 -117426957 - L1MB8 LINE L1 -1337 4809 4132 * 231 223 264 16 chr2 135830423 135830544 -117426039 - LTR33A LTR ERVL -11 512 362 2222 169 67 7 chr2 135830544 135831005 -117425578 - MER41-int LTR ERV1 -2727 3219 2731 886 155 48 24 chr2 135831014 135831221 -117425362 - MER41-int LTR ERV1 -6070 2050 1839 * 1519 164 22 15 chr2 135831220 135831494 -117425089 - MER41-int LTR ERV1 -3592 2354 2079 205 324 54 0 chr2 135831500 135831574 -117425009 - MIR SINE MIR -108 154 77 1655 134 0 0 chr2 135832283 135832536 -117424047 + AluSq SINE Alu 45 297 -16 2168 119 3 0 chr2 135832637 135832949 -117423634 + AluSp SINE Alu 1 313 0 996 94 7 0 chr2 135833137 135833275 -117423308 + MER85 DNA T2_type 1 139 0 311 242 17 25 chr2 135833430 135833550 -117423033 + GA-rich Low_complexity Low_complexity 2 120 0 2276 87 0 13 chr2 135833655 135833967 -117422616 + AluY SINE Alu 1 308 -3 737 201 77 96 chr2 135835045 135835731 -117420852 - HSREP522 Satellite telomeric 0 672 1 7192 191 52 54 chr2 135836124 135837545 -117419038 - L1 LINE L1 -1913 5652 4233 2069 72 7 0 chr2 135837545 135837848 -117418735 - AluY SINE Alu 0 305 1 7192 191 52 54 chr2 135837848 135838774 -117417809 - L1 LINE L1 -3332 4233 3306 543 153 0 0 chr2 135838775 135838860 -117417723 + AluSc SINE Alu 161 245 -64 432 51 0 0 chr2 135839022 135839081 -117417502 + (TC)n Simple_repeat Simple_repeat 1 59 0 22 0 0 0 chr2 135839172 135839194 -117417389 + AT_rich Low_complexity Low_complexity 1 22 0 2288 70 0 13 chr2 135839194 135839496 -117417087 + AluY SINE Alu 1 298 -13 215 220 154 5 chr2 135845325 135845433 -117411150 + MIR SINE MIR 61 187 -62 225 286 0 0 chr2 135847871 135847927 -117408656 + G-rich Low_complexity Low_complexity 1 56 0 2634 59 0 0 chr2 135848094 135848401 -117408182 - AluY SINE Alu -2 309 3 2029 94 18 0 chr2 135849128 135849447 -117407136 + AluSx SINE Alu 1 324 0 205 118 78 0 chr2 135849491 135849514 -117407069 + A-rich Low_complexity Low_complexity 6 26 -34 1442 176 6 70 chr2 135849514 135849844 -117406739 + AluJb SINE Alu 3 311 -1 205 118 78 0 chr2 135849844 135849871 -117406712 + A-rich Low_complexity Low_complexity 26 60 0 404 301 15 8 chr2 135849877 135850010 -117406573 + L1MCa LINE L1 628 761 -5803 * 1939 192 49 47 chr2 135849997 135850498 -117406085 + L1MCa LINE L1 650 1148 -4931 2204 141 3 3 chr2 135850498 135850810 -117405773 + AluSx SINE Alu 1 312 0 1939 192 49 47 chr2 135850810 135850826 -117405757 + L1MCa LINE L1 1148 1162 -4917 1989 160 0 3 chr2 135850826 135850962 -117405621 + AluSx SINE Alu 1 136 -176 2241 68 4 0 chr2 135850962 135851228 -117405355 + AluY SINE Alu 39 305 -6 1989 160 0 3 chr2 135851228 135851391 -117405192 + AluSx SINE Alu 136 299 -13 1939 192 49 47 chr2 135851391 135851424 -117405159 + L1MCa LINE L1 1162 1215 -4864 1256 183 133 0 chr2 135851426 135851689 -117404894 + AluJb SINE Alu 4 301 -1 386 148 148 7 chr2 135851689 135851838 -117404745 + L1MCa LINE L1 1992 2161 -4403 1552 155 44 4 chr2 135851899 135852150 -117404433 - AluJo SINE Alu -49 263 3 1299 224 15 51 chr2 135852150 135852485 -117404098 - L1M4c LINE L1 -5814 570 248 598 218 0 0 chr2 135852486 135852610 -117403973 - MLT2B1 LTR ERVL -396 124 1 476 80 0 0 chr2 135852610 135852685 -117403898 - ERVL-B1 LTR ERVL -7 5757 5683 1827 220 133 27 chr2 135852728 135853279 -117403304 - MER50 LTR ERV1 0 734 126 2124 137 13 0 chr2 135853285 135853585 -117402998 - AluSx SINE Alu -8 304 1 1777 150 7 7 chr2 135853732 135854012 -117402571 + AluJo SINE Alu 7 286 -26 953 216 17 6 chr2 135855005 135855186 -117401397 - AluJb SINE Alu -22 290 108 320 261 11 0 chr2 135860753 135860841 -117395742 - MIR SINE MIR -113 149 61 1641 181 21 7 chr2 135861806 135862093 -117394490 + AluJo SINE Alu 3 293 -19 1549 117 159 0 chr2 135862265 135862522 -117394061 - AluSx SINE Alu -14 298 1 1835 138 28 10 chr2 135862946 135863236 -117393347 - AluJb SINE Alu -17 295 1 21 0 0 0 chr2 135864816 135864837 -117391746 + GC_rich Low_complexity Low_complexity 1 21 0 2292 91 7 3 chr2 135865858 135866155 -117390428 + AluSq SINE Alu 1 298 -15 21 57 0 0 chr2 135866458 135866493 -117390090 + AT_rich Low_complexity Low_complexity 1 35 0 409 325 93 42 chr2 135866638 135866992 -117389591 - L1M4 LINE L1 -1526 4620 4249 348 297 108 20 chr2 135867020 135867168 -117389415 - L1M4 LINE L1 -1958 4188 4028 5428 62 1 16 chr2 135867181 135867921 -117388662 + L1PA7 LINE L1 5423 6151 -3 189 281 132 33 chr2 135868013 135868134 -117388449 + L2 LINE L2 2397 2529 -785 1973 143 10 3 chr2 135868419 135868713 -117387870 + AluSx SINE Alu 13 308 -4 279 79 0 0 chr2 135869115 135869153 -117387430 + (T)n Simple_repeat Simple_repeat 1 38 0 2478 86 0 0 chr2 135869211 135869515 -117387068 - AluSc SINE Alu -4 305 2 2516 54 6 13 chr2 135869569 135869882 -117386701 - AluY SINE Alu 0 311 1 1691 146 11 21 chr2 135870680 135870961 -117385622 + AluJb SINE Alu 35 312 0 1276 266 35 62 chr2 135871403 135871887 -117384696 - MLT1G1 LTR MaLR 0 595 125 2751 247 95 70 chr2 135872735 135872997 -117383586 + Tigger6b DNA MER2_type 1 255 -1342 2555 67 0 22 chr2 135872997 135873310 -117383273 - AluSc SINE Alu -3 306 1 2751 247 95 70 chr2 135873310 135874169 -117382414 + Tigger6b DNA MER2_type 255 1174 -423 185 0 40 0 chr2 135874169 135874194 -117382389 + (CAAAA)n Simple_repeat Simple_repeat 1 26 0 2751 247 95 70 chr2 135874194 135874628 -117381955 + Tigger6b DNA MER2_type 1174 1596 -1 2472 80 3 3 chr2 135875465 135875776 -117380807 + AluSp SINE Alu 1 311 -2 21 36 0 0 chr2 135876522 135876550 -117380033 + AT_rich Low_complexity Low_complexity 1 28 0 942 153 17 28 chr2 135876800 135876977 -117379606 - FAM SINE Alu 0 175 1 2175 102 30 3 chr2 135877251 135877546 -117379037 + AluY SINE Alu 1 303 -8 2261 103 0 0 chr2 135877985 135878289 -117378294 - AluSg SINE Alu 0 304 1 750 286 164 22 chr2 135879071 135879416 -117377167 + L2 LINE L2 1281 1708 -1606 1968 200 35 7 chr2 135879416 135879867 -117376716 - MER88 LTR ERVL 0 464 1 750 286 164 22 chr2 135879867 135879979 -117376604 + L2 LINE L2 1708 1803 -1511 247 213 0 125 chr2 135880234 135880394 -117376189 + C-rich Low_complexity Low_complexity 2 141 0 208 227 0 0 chr2 135883324 135883368 -117373215 + GA-rich Low_complexity Low_complexity 2 45 0 180 0 0 0 chr2 135883965 135883985 -117372598 + (A)n Simple_repeat Simple_repeat 1 20 0 479 276 71 19 chr2 135884038 135884248 -117372335 + L2 LINE L2 1889 2109 -1205 925 213 6 0 chr2 135884249 135884418 -117372165 - MER45A DNA AcHobo -1 177 8 1824 271 100 17 chr2 135884459 135885292 -117371291 + L2 LINE L2 2170 3049 -264 335 327 0 9 chr2 135885740 135885847 -117370736 + L2 LINE L2 3208 3313 0 330 249 88 94 chr2 135886665 135886703 -117369880 - L1ME4a LINE L1 0 6121 6084 1784 175 0 26 chr2 135886703 135887006 -117369577 + AluJo SINE Alu 3 297 -15 330 249 88 94 chr2 135887006 135887017 -117369566 - L1ME4a LINE L1 -37 6084 6074 1717 121 88 7 chr2 135887017 135887290 -117369293 + AluSc SINE Alu 5 299 -10 330 249 88 94 chr2 135887290 135887420 -117369163 - L1ME4a LINE L1 -47 6074 5942 331 301 174 36 chr2 135887456 135887751 -117368832 - L1M4 LINE L1 -2208 3938 3624 908 238 94 7 chr2 135887823 135888121 -117368462 - MER5C DNA MER1_type 0 324 1 733 297 128 39 chr2 135888251 135888301 -117368282 - Charlie7 DNA MER1_type -1873 739 695 2376 75 0 23 chr2 135888301 135888608 -117367975 - AluY SINE Alu -11 300 1 733 297 128 39 chr2 135888608 135889030 -117367553 - Charlie7 DNA MER1_type -1917 695 191 7305 25 6 1 chr2 135889030 135889982 -117366601 + L1PA4 LINE L1 5200 6155 0 733 297 128 39 chr2 135889982 135890155 -117366428 - Charlie7 DNA MER1_type -2421 191 35 187 260 0 0 chr2 135890222 135890272 -117366311 + MER5A DNA MER1_type 56 105 -84 192 40 0 0 chr2 135891751 135891776 -117364807 + (CACGC)n Simple_repeat Simple_repeat 4 28 0 1218 254 14 8 chr2 135893078 135893437 -117363146 + L1MB3 LINE L1 4845 5205 -941 1881 164 3 13 chr2 135893441 135893752 -117362831 + AluJo SINE Alu 4 311 -1 2243 104 3 19 chr2 135893753 135894062 -117362521 + AluSp SINE Alu 1 304 -9 1257 181 69 22 chr2 135894065 135894341 -117362242 + L1MB3 LINE L1 5735 6023 -160 561 179 7 50 chr2 135894343 135894483 -117362100 - AluJo SINE Alu -176 136 3 642 178 30 7 chr2 135894491 135894626 -117361957 + L1MB2 LINE L1 6030 6167 -4 2077 129 44 0 chr2 135894654 135894949 -117361634 + AluSx SINE Alu 1 308 -4 2320 116 0 3 chr2 135895724 135896035 -117360548 - AluSx SINE Alu -2 310 1 520 261 49 76 chr2 135896254 135896518 -117360065 + L1MC4 LINE L1 6963 7219 -823 1356 196 3 63 chr2 135896519 135896835 -117359748 + AluJo SINE Alu 1 297 -15 1328 148 0 14 chr2 135896838 135897047 -117359536 + AluJb SINE Alu 85 290 -22 970 189 133 0 chr2 135897142 135897322 -117359261 - AluJo SINE Alu -21 291 88 1947 174 3 0 chr2 135897330 135897634 -117358949 - AluSx SINE Alu -7 305 1 279 233 0 0 chr2 135897657 135897717 -117358866 + L1MC4 LINE L1 7316 7375 -667 266 233 93 0 chr2 135897833 135897919 -117358664 + L1MC4 LINE L1 7566 7659 -383 770 253 28 39 chr2 135897954 135898174 -117358409 + L1MC4 LINE L1 7761 7979 -63 1805 165 48 3 chr2 135898174 135898465 -117358118 - AluJo SINE Alu -8 304 1 770 253 28 39 chr2 135898465 135898529 -117358054 + L1MC4 LINE L1 7979 8042 0 950 228 88 48 chr2 135898533 135898805 -117357778 + AluJo SINE Alu 6 288 -24 1606 137 104 0 chr2 135898818 135899088 -117357495 + AluSx SINE Alu 1 298 -14 1536 177 11 3 chr2 135899108 135899390 -117357193 + AluJo SINE Alu 12 295 -17 1901 125 3 17 chr2 135899391 135899680 -117356903 + AluSx SINE Alu 2 286 -26 252 0 0 0 chr2 135899683 135899711 -117356872 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 1749 122 8 0 chr2 135899768 135900015 -117356568 - AluSx SINE Alu -63 249 1 302 304 10 29 chr2 135902550 135902643 -117353940 + L1M4 LINE L1 3072 3164 -2982 1830 164 0 0 chr2 135902643 135902923 -117353660 - AluJb SINE Alu -24 288 9 1135 184 18 36 chr2 135903125 135903348 -117353235 - MER20 DNA MER1_type 0 219 1 723 184 40 0 chr2 135904605 135904730 -117351853 - FLAM_A SINE Alu -2 131 2 1459 167 46 52 chr2 135905294 135905600 -117350983 - AluJo SINE Alu -8 304 1 1648 185 0 3 chr2 135905706 135905992 -117350591 - AluJo SINE Alu -27 285 1 2002 128 10 0 chr2 135906026 135906331 -117350252 + AluSx SINE Alu 1 308 -4 234 293 13 13 chr2 135906396 135906471 -117350112 - MIR SINE MIR -10 252 178 645 164 150 14 chr2 135906471 135906611 -117349972 + MLT1E2 LTR MaLR 2 160 -464 * 1143 194 170 0 chr2 135906607 135906854 -117349729 + MLT1E2 LTR MaLR 330 618 -8 395 228 59 44 chr2 135906859 135906995 -117349588 - MIR SINE MIR -80 182 45 2042 133 13 0 chr2 135907123 135907431 -117349152 + AluSx SINE Alu 1 312 0 2268 71 10 13 chr2 135907722 135908032 -117348551 - AluY SINE Alu -2 309 1 1252 118 10 5 chr2 135908069 135908264 -117348319 - AluSq SINE Alu -84 229 34 2078 122 3 0 chr2 135908268 135908564 -117348019 - AluSg SINE Alu -13 297 1 2358 49 16 10 chr2 135908566 135908874 -117347709 - AluY SINE Alu -1 310 1 2152 75 0 26 chr2 135908877 135909182 -117347401 - AluSg1 SINE Alu -12 297 1 217 313 50 0 chr2 135910547 135910627 -117345956 - L2 LINE L2 -12 3260 3177 184 292 0 0 chr2 135910683 135910731 -117345852 + MIR SINE MIR 207 254 -8 585 195 62 0 chr2 135911694 135911807 -117344776 + FLAM_C SINE Alu 1 120 -13 1803 120 9 67 chr2 135913551 135913690 -117342893 + AluJo SINE Alu 7 152 -160 2435 50 0 7 chr2 135913690 135913988 -117342595 + AluY SINE Alu 1 296 -15 1803 120 9 67 chr2 135913988 135914164 -117342419 + AluJo SINE Alu 152 304 -8 1519 176 8 0 chr2 135915322 135915584 -117340999 + AluJb SINE Alu 35 298 -14 754 170 15 30 chr2 135915599 135915734 -117340849 + AluJo SINE Alu 1 133 -169 250 206 68 0 chr2 135915746 135915819 -117340764 + Charlie5 DNA MER1_type 2431 2508 -104 1689 168 17 3 chr2 135915844 135916142 -117340441 - AluJo SINE Alu -1 311 10 724 205 11 103 chr2 135916558 135916743 -117339840 + AluJo SINE Alu 133 300 -12 1936 198 45 59 chr2 135917663 135918154 -117338429 - LTR42 LTR ERVL -11 484 1 183 42 0 0 chr2 135919400 135919424 -117337159 + (T)n Simple_repeat Simple_repeat 1 24 0 1747 85 4 4 chr2 135919610 135919846 -117336737 - AluY SINE Alu -14 297 62 1664 106 13 0 chr2 135921471 135921706 -117334877 + AluSq SINE Alu 1 238 -75 910 196 28 0 chr2 135921823 135922002 -117334581 + AluSg/x SINE Alu 119 302 -8 2266 87 7 0 chr2 135922059 135922359 -117334224 + AluSx SINE Alu 3 304 -8 2059 141 0 0 chr2 135923407 135923706 -117332877 - AluSx SINE Alu -13 299 1 818 268 47 11 chr2 135925536 135925812 -117330771 + LTR33 LTR ERVL 10 295 -226 1728 168 13 22 chr2 135925936 135926251 -117330332 + AluJo SINE Alu 1 312 0 1634 164 13 3 chr2 135926338 135926636 -117329947 - AluJb SINE Alu -11 301 1 784 105 99 61 chr2 135927638 135927656 -117328927 - LTR23 LTR ERV1 -5 432 416 1991 109 3 13 chr2 135927656 135927959 -117328624 + AluSx SINE Alu 1 300 -12 784 105 99 61 chr2 135927959 135927990 -117328593 - LTR23 LTR ERV1 -21 416 388 1803 141 10 27 chr2 135927990 135928288 -117328295 + AluSx SINE Alu 1 293 -19 784 105 99 61 chr2 135928288 135928418 -117328165 - LTR23 LTR ERV1 -49 388 245 425 169 42 0 chr2 135928422 135928493 -117328090 - FLAM SINE Alu -24 119 46 1139 126 42 84 chr2 135928505 135928541 -117328042 - LTR23 LTR ERV1 -185 252 216 2148 118 3 0 chr2 135928541 135928837 -117327746 + AluSq SINE Alu 1 297 -16 2289 78 0 0 chr2 135928837 135929133 -117327450 + AluY SINE Alu 1 296 -15 1139 126 42 84 chr2 135929133 135929357 -117327226 - LTR23 LTR ERV1 -219 218 2 620 202 0 8 chr2 135929475 135929604 -117326979 - FLAM_A SINE Alu 0 142 15 1196 211 181 24 chr2 135930006 135930342 -117326241 - MLT1B LTR MaLR 0 390 2 1281 205 179 7 chr2 135930417 135930714 -117325869 - MER7A DNA MER2_type 0 346 1 248 185 0 0 chr2 135930720 135930774 -117325809 - L1ME4a LINE L1 0 6121 6068 527 105 58 0 chr2 135931765 135931851 -117324732 - AluSc SINE Alu 0 309 219 824 116 47 16 chr2 135932341 135932470 -117324113 - FLAM_C SINE Alu 0 133 1 2255 101 0 0 chr2 135933136 135933432 -117323151 + AluSq SINE Alu 1 296 -17 1379 217 82 49 chr2 135933816 135934039 -117322544 - Charlie1 DNA MER1_type 0 2761 2547 2208 114 0 0 chr2 135934039 135934347 -117322236 - AluSx SINE Alu -4 308 1 1379 217 82 49 chr2 135934347 135934574 -117322009 - Charlie1 DNA MER1_type -214 2547 2296 1636 173 3 3 chr2 135934696 135934985 -117321598 + AluJb SINE Alu 1 289 -23 1879 113 17 14 chr2 135935277 135935569 -117321014 + AluSx SINE Alu 1 293 -19 1156 75 97 151 chr2 135936273 135936318 -117320265 - MSTA LTR MaLR 0 428 382 1832 108 8 0 chr2 135936318 135936577 -117320006 + AluSx SINE Alu 7 267 -45 1156 75 97 151 chr2 135936577 135936809 -117319774 - MSTA LTR MaLR -46 382 166 409 103 0 0 chr2 135936809 135936867 -117319716 - AluS SINE Alu -232 80 23 21 57 0 0 chr2 135986987 135987022 -117269561 + AT_rich Low_complexity Low_complexity 1 35 0 347 266 28 46 chr2 135987201 135987310 -117269273 + MIR SINE MIR 155 261 -1 394 298 110 21 chr2 135987540 135987731 -117268852 + MIR SINE MIR 35 242 -20 940 272 63 57 chr2 135988910 135989357 -117267226 + L2 LINE L2 2791 3238 -75 228 152 0 22 chr2 135989547 135989593 -117266990 + CT-rich Low_complexity Low_complexity 2 46 0 794 211 39 28 chr2 135989601 135989781 -117266802 + MER58A DNA MER1_type 43 224 0 312 79 40 132 chr2 135989783 135989859 -117266724 - L1M4 LINE L1 -2905 3241 3173 1137 161 0 0 chr2 135989860 135990040 -117266543 - AluSg/x SINE Alu -1 311 132 416 212 16 109 chr2 135990055 135990248 -117266335 - L1MEc LINE L1 -3439 2776 2602 * 1378 240 94 33 chr2 135990245 135990535 -117266048 - L1MEc LINE L1 -3488 2727 2456 2136 90 7 0 chr2 135990535 135990927 -117265656 - AluSq SINE Alu 0 394 1 1378 240 94 33 chr2 135990927 135991034 -117265549 - L1MEc LINE L1 -3759 2456 2357 1425 182 80 14 chr2 135991034 135991309 -117265274 - AluJo SINE Alu -9 293 1 1378 240 94 33 chr2 135991309 135991743 -117264840 - L1MEc LINE L1 -3858 2357 1866 371 167 188 0 chr2 135991748 135991844 -117264739 - L1MB8 LINE L1 0 6178 6065 2443 58 0 0 chr2 135991848 135992158 -117264425 - AluY SINE Alu -1 310 1 1792 117 9 68 chr2 135992498 135992824 -117263759 - AluSx SINE Alu -5 307 1 262 319 140 6 chr2 135992868 135993025 -117263558 - MIR SINE MIR -30 232 55 209 387 0 21 chr2 135993916 135994009 -117262574 - MIR SINE MIR -82 126 36 522 302 39 35 chr2 135994587 135994662 -117261921 + MIR SINE MIR 11 84 -178 2113 113 0 0 chr2 135994662 135994955 -117261628 - AluSc SINE Alu -16 293 1 522 302 39 35 chr2 135994955 135995111 -117261472 + MIR SINE MIR 84 243 -19 589 241 54 49 chr2 135995687 135995890 -117260693 + MIR SINE MIR 56 259 -3 330 115 0 0 chr2 135996190 135996242 -117260341 + (CA)n Simple_repeat Simple_repeat 1 52 0 278 322 110 8 chr2 135996276 135996394 -117260189 - L2 LINE L2 -2 3270 3141 386 279 57 25 chr2 135996642 135996764 -117259819 - MIR SINE MIR -124 138 13 239 271 21 0 chr2 135997624 135997720 -117258863 + CT-rich Low_complexity Low_complexity 3 100 0 2357 63 0 10 chr2 135997782 135998085 -117258498 - AluY SINE Alu -11 300 1 391 267 53 111 chr2 135998353 135998615 -117257968 - MLT1I LTR MaLR -123 286 73 234 282 155 21 chr2 135998683 135998825 -117257758 - L2 LINE L2 -163 3109 2949 322 260 55 125 chr2 135999518 135999718 -117256865 + MIR SINE MIR 20 205 -57 399 312 72 9 chr2 136000330 136000531 -117256052 + MIR SINE MIR 9 225 -37 328 314 149 27 chr2 136000712 136000973 -117255610 + L2 LINE L2 3021 3313 0 622 206 6 6 chr2 136001466 136001646 -117254937 + (CAT)n Simple_repeat Simple_repeat 1 180 0 204 288 233 25 chr2 136001663 136001789 -117254794 + MIR SINE MIR 4 173 -89 2168 70 92 0 chr2 136001789 136002060 -117254523 - AluY SINE Alu -15 296 1 204 288 233 25 chr2 136002060 136002096 -117254487 + MIR SINE MIR 173 200 -62 389 232 49 31 chr2 136002278 136002468 -117254115 + MER110A LTR ERV1 313 482 -2 1794 176 10 3 chr2 136002504 136002811 -117253772 - AluJo SINE Alu -3 309 1 331 305 49 74 chr2 136003116 136003319 -117253264 + MIR SINE MIR 48 245 -17 2028 137 31 20 chr2 136003520 136003877 -117252706 - MER46B DNA MER2_type 0 236 1 728 231 66 42 chr2 136004528 136004740 -117251843 - MER20 DNA MER1_type -1 218 2 180 200 0 0 chr2 136005472 136005512 -117251071 + GA-rich Low_complexity Low_complexity 2 41 0 256 197 0 15 chr2 136005555 136005621 -117250962 + (CAGAGA)n Simple_repeat Simple_repeat 2 66 0 276 341 39 29 chr2 136006917 136007125 -117249458 + MLT1L LTR MaLR 349 558 -57 2169 112 3 10 chr2 136007225 136007530 -117249053 + AluSx SINE Alu 1 303 -9 186 258 313 11 chr2 136008242 136008405 -117248178 - MIR SINE MIR 0 262 35 200 270 32 0 chr2 136012556 136012619 -117243964 + L2 LINE L2 3206 3270 -2 325 226 247 32 chr2 136013970 136014156 -117242427 - MIR SINE MIR -21 241 16 248 311 162 6 chr2 136014713 136014880 -117241703 - MIR3 SINE MIR -12 196 4 7736 91 8 21 chr2 136017042 136018127 -117238456 - MER11C LTR ERVK 0 1071 1 573 209 187 0 chr2 136021893 136022075 -117234508 - MER58B DNA MER1_type -8 333 118 288 0 0 0 chr2 136022986 136023018 -117233565 + (TG)n Simple_repeat Simple_repeat 2 33 0 257 98 59 0 chr2 136023607 136023658 -117232925 + L1MC4 LINE L1 7306 7359 -683 1914 50 0 25 chr2 136023755 136023993 -117232590 + AluY SINE Alu 79 310 -1 580 290 72 32 chr2 136024003 136024224 -117232359 + MIR SINE MIR 33 262 0 352 323 127 11 chr2 136025315 136025504 -117231079 + L1ME LINE L1 4094 4304 -1842 2368 84 24 0 chr2 136025515 136025813 -117230770 + AluY SINE Alu 1 305 -6 681 227 47 50 chr2 136025898 136026175 -117230408 + L1MC5 LINE L1 7168 7443 -518 1119 147 58 93 chr2 136026199 136026526 -117230057 + L1MB7 LINE L1 5651 5966 -212 2472 53 0 0 chr2 136026555 136026860 -117229723 + AluY SINE Alu 1 305 0 606 131 11 162 chr2 136026900 136027091 -117229492 + L1MB7 LINE L1 5961 6122 -62 663 224 110 37 chr2 136027169 136027441 -117229142 + L1MC5 LINE L1 7516 7807 -154 410 326 72 33 chr2 136027516 136027792 -117228791 + L1ME LINE L1 5281 5567 -597 2343 101 0 3 chr2 136027799 136028106 -117228477 - AluSq SINE Alu -4 309 4 710 178 0 31 chr2 136028524 136028653 -117227930 - FLAM_C SINE Alu -17 126 2 310 211 0 0 chr2 136028980 136029037 -117227546 + L1MA9 LINE L1 5205 5261 -885 1754 171 57 3 chr2 136029046 136029380 -117227203 - MLT1A1 LTR MaLR -13 352 1 2774 156 56 13 chr2 136029381 136029966 -117226617 + L1MA9 LINE L1 5258 5934 -378 225 333 101 0 chr2 136031612 136031741 -117224842 + MER3 DNA MER1_type 23 164 -45 2439 61 0 7 chr2 136032546 136032843 -117223740 - AluY SINE Alu -16 295 1 2411 59 17 0 chr2 136033131 136033419 -117223164 - AluSg SINE Alu -9 301 9 1958 254 55 8 chr2 136035266 136035793 -117220790 - MER92C LTR ERV1 -2 552 1 804 290 201 28 chr2 136036125 136037346 -117219237 - L2 LINE L2 -2 3311 1798 278 154 77 31 chr2 136037426 136037491 -117219092 - L2 LINE L2 -249 3064 2997 236 288 38 12 chr2 136038234 136038314 -117218269 - L2 LINE L2 -547 2767 2686 394 271 112 29 chr2 136038345 136038579 -117218004 - L1M LINE L1 -803 5343 5164 636 41 0 0 chr2 136039692 136039765 -117216818 + tRNA-Glu-GAA tRNA tRNA 1 73 -2 789 184 46 0 chr2 136040427 136040579 -117216004 + AluJb SINE Alu 136 294 -18 186 43 0 0 chr2 136040657 136040680 -117215903 + (TTCA)n Simple_repeat Simple_repeat 4 26 0 2980 238 54 26 chr2 136040734 136041679 -117214904 + L1MCb LINE L1 1 965 -5081 2794 191 27 42 chr2 136041745 136042416 -117214167 - MLT1C-int LTR MaLR -487 884 224 1742 117 83 40 chr2 136042417 136042742 -117213841 - MER1B DNA MER1_type 0 339 1 1001 177 72 0 chr2 136042742 136042951 -117213632 - MLT1C-int LTR MaLR -1142 229 6 740 247 138 33 chr2 136042956 136043269 -117213314 - MLT1C LTR MaLR 0 505 132 2194 126 3 0 chr2 136043269 136043578 -117213005 + AluSp SINE Alu 1 310 -3 216 0 0 0 chr2 136043583 136043607 -117212976 + (A)n Simple_repeat Simple_repeat 1 24 0 237 103 88 103 chr2 136043846 136043914 -117212669 + MER74C LTR ERVL 5 71 -389 950 185 5 16 chr2 136044338 136044527 -117212056 + AluSc SINE Alu 117 303 -6 2049 174 134 17 chr2 136044528 136045067 -117211516 - L1MB7 LINE L1 -155 6029 5428 268 59 0 10 chr2 136045065 136045115 -117211468 - L1MB4 LINE L1 0 6183 6135 * 2758 134 109 43 chr2 136045141 136045574 -117211009 - L1MB4 LINE L1 -31 6149 5667 2367 76 0 0 chr2 136045574 136045884 -117210699 + AluY SINE Alu 1 311 0 2758 134 109 43 chr2 136045884 136046026 -117210557 - L1MB4 LINE L1 -513 5667 5536 513 255 147 29 chr2 136046050 136046356 -117210227 - MER7A DNA MER2_type -4 342 3 2969 179 94 20 chr2 136046368 136047111 -117209472 - L1MB4 LINE L1 -706 5468 4668 1230 161 106 37 chr2 136047122 136047395 -117209188 + MER68 LTR ERV1 1 292 -270 1471 175 133 3 chr2 136047397 136047757 -117208826 - L1MB4 LINE L1 -2197 3949 3543 276 238 164 0 chr2 136047761 136047883 -117208700 - L1MEc LINE L1 -4537 1859 1718 969 209 24 10 chr2 136047885 136048091 -117208492 - AluJo SINE Alu -13 299 91 572 135 87 0 chr2 136048113 136048217 -117208366 - FLAM_A SINE Alu 0 142 30 1230 264 86 39 chr2 136048240 136048451 -117208132 - L1MEc LINE L1 -4669 1727 1527 2037 125 14 3 chr2 136048451 136048739 -117207844 + AluSx SINE Alu 1 291 -21 1230 264 86 39 chr2 136048739 136049388 -117207195 - L1MEc LINE L1 -4869 1527 758 375 329 115 57 chr2 136049406 136049972 -117206611 - L1MEc LINE L1 -5720 676 78 368 279 74 8 chr2 136050936 136051058 -117205525 + MIR SINE MIR 123 252 -10 1980 104 10 0 chr2 136052605 136052893 -117203690 + AluSx SINE Alu 11 301 -11 236 235 0 0 chr2 136053392 136053443 -117203140 + G-rich Low_complexity Low_complexity 6 56 0 243 306 11 33 chr2 136054732 136054912 -117201671 + (CAGA)n Simple_repeat Simple_repeat 1 176 0 886 164 115 0 chr2 136055362 136055527 -117201056 - AluJo SINE Alu -128 184 1 481 309 76 19 chr2 136055790 136056104 -117200479 + LTR16C LTR ERVL 66 397 -94 604 193 78 118 chr2 136056234 136056477 -117200106 + LTR40b LTR ERVL 128 354 -108 1879 130 0 36 chr2 136056477 136056785 -117199798 - AluSg SINE Alu -13 297 1 604 193 78 118 chr2 136056785 136056889 -117199694 + LTR40b LTR ERVL 354 461 -1 274 292 52 10 chr2 136056897 136056993 -117199590 + L2 LINE L2 2881 2980 -333 * 462 287 54 12 chr2 136056977 136057144 -117199439 + L2 LINE L2 3115 3288 -25 228 130 0 43 chr2 136057310 136057356 -117199227 + LTR40c LTR ERVL 4 47 -418 1814 213 49 22 chr2 136057368 136057818 -117198765 + MLT1C LTR MaLR 6 467 0 445 239 71 1 chr2 136057818 136058049 -117198534 + LTR40b LTR ERVL 49 324 -138 844 196 0 0 chr2 136061110 136061268 -117195315 - AluJb SINE Alu -18 294 137 452 219 14 41 chr2 136062121 136062267 -117194316 + MLT1E1 LTR MaLR 513 654 0 183 222 0 0 chr2 136062788 136062824 -117193759 + L2 LINE L2 3277 3312 -1 1095 98 74 0 chr2 136063113 136063276 -117193307 - AluSc SINE Alu 0 309 135 1415 224 115 11 chr2 136063354 136063862 -117192721 + MER90 LTR ERV1 1 608 -6 282 188 0 12 chr2 136063875 136063963 -117192620 - L1ME LINE L1 -528 5593 5512 403 223 5 27 chr2 136064182 136064366 -117192217 + (TGG)n Simple_repeat Simple_repeat 1 180 0 2306 70 0 3 chr2 136064656 136064956 -117191627 - AluY SINE Alu -12 299 1 2123 91 3 34 chr2 136067572 136067892 -117188691 + AluY SINE Alu 1 310 -1 206 233 0 68 chr2 136069130 136069203 -117187380 + CT-rich Low_complexity Low_complexity 1 68 0 2347 74 0 3 chr2 136069741 136070052 -117186531 - AluY SINE Alu 0 311 2 680 170 67 61 chr2 136070875 136071040 -117185543 - MLT1B LTR MaLR -223 167 2 1335 181 200 0 chr2 136071118 136071388 -117185195 - MER7A DNA MER2_type -23 323 2 615 311 81 0 chr2 136071453 136071701 -117184882 - L1ME LINE L1 -354 5767 5500 1799 226 107 31 chr2 136071910 136072580 -117184003 - L1MC4 LINE L1 -151 7891 7012 1239 204 80 73 chr2 136072611 136073087 -117183496 - L1MC4 LINE L1 -2 8040 7562 2156 87 28 7 chr2 136073337 136073626 -117182957 + AluSg SINE Alu 2 296 -14 440 282 141 33 chr2 136073647 136073888 -117182695 - L1ME LINE L1 -1094 5052 4786 5668 197 10 9 chr2 136074483 136075643 -117180940 - L1P LINE L1 -1711 4435 3274 1521 42 5 0 chr2 136075650 136075840 -117180743 + L1P LINE L1 4463 4653 -1493 2185 110 3 3 chr2 136076947 136077257 -117179326 + AluSg SINE Alu 1 310 0 1978 101 0 30 chr2 136077581 136077877 -117178706 - AluSx SINE Alu -25 287 1 2082 92 10 0 chr2 136078629 136078921 -117177662 + AluY SINE Alu 1 295 -16 651 219 52 38 chr2 136079138 136079425 -117177158 + pTR5 LTR ERV1 738 1028 -1410 3046 109 279 9 chr2 136079504 136080046 -117176537 + LTR12 LTR ERV1 1 688 0 21 0 0 0 chr2 136080651 136080672 -117175911 + AT_rich Low_complexity Low_complexity 1 21 0 459 241 17 0 chr2 136080912 136081028 -117175555 - L1M4 LINE L1 -607 5577 5460 21 0 0 0 chr2 136081177 136081198 -117175385 + AT_rich Low_complexity Low_complexity 1 21 0 1670 159 0 20 chr2 136081760 136082055 -117174528 + AluJb SINE Alu 1 289 -23 304 144 44 11 chr2 136082058 136082148 -117174435 + GA-rich Low_complexity Low_complexity 4 96 0 404 353 123 26 chr2 136082348 136082730 -117173853 + L2 LINE L2 285 703 -2611 369 283 162 44 chr2 136082747 136082843 -117173740 + L2 LINE L2 2253 2336 -978 611 201 7 50 chr2 136082843 136082982 -117173601 + FLAM_A SINE Alu 1 133 0 369 283 162 44 chr2 136082982 136083200 -117173383 + L2 LINE L2 2336 2604 -710 24 0 0 0 chr2 136083301 136083325 -117173258 + AT_rich Low_complexity Low_complexity 1 24 0 2438 65 0 0 chr2 136083326 136083635 -117172948 - AluY SINE Alu -2 309 1 294 146 106 163 chr2 136084258 136084381 -117172202 - MER74A LTR ERVL -12 546 431 627 134 116 9 chr2 136084400 136084512 -117172071 - MER74C LTR ERVL -333 127 4 434 185 68 75 chr2 136084561 136084707 -117171876 + MLT1C LTR MaLR 1 145 -322 216 0 0 0 chr2 136084720 136084744 -117171839 + (T)n Simple_repeat Simple_repeat 1 24 0 245 161 6 199 chr2 136084773 136085089 -117171494 - AluSq SINE Alu -11 292 38 22 35 0 0 chr2 136086952 136086981 -117169602 + AT_rich Low_complexity Low_complexity 1 29 0 737 214 49 31 chr2 136087888 136088112 -117168471 - MER65C LTR ERV1 -4 457 230 537 288 36 47 chr2 136088116 136088592 -117167991 - MER4-int LTR ERV1 -335 4545 2468 459 0 0 0 chr2 136088644 136088695 -117167888 + (CA)n Simple_repeat Simple_repeat 2 52 0 586 227 17 45 chr2 136088747 136088923 -117167660 - MER4-int LTR ERV1 -2866 3732 3562 5616 85 48 11 chr2 136089131 136089946 -117166637 - L1PA8A LINE L1 0 6131 5287 332 179 13 0 chr2 136090039 136090117 -117166466 + (TA)n Simple_repeat Simple_repeat 1 79 0 773 190 92 18 chr2 136090248 136090411 -117166172 - MER3 DNA MER1_type 0 209 35 186 71 0 0 chr2 136090435 136090463 -117166120 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1733 117 8 0 chr2 136090469 136090718 -117165865 - AluSg1 SINE Alu -58 251 1 226 350 81 27 chr2 136091275 136091461 -117165122 - MLT1L LTR MaLR -224 391 196 586 283 151 9 chr2 136091689 136091908 -117164675 + MIR SINE MIR 7 256 -6 474 169 84 0 chr2 136092075 136092158 -117164425 + MER58B DNA MER1_type 252 341 0 235 246 92 62 chr2 136092161 136092209 -117164374 + L1MEd LINE L1 31 76 -6043 1840 138 3 28 chr2 136092209 136092528 -117164055 + AluSq SINE Alu 1 311 -2 235 246 92 62 chr2 136092528 136092609 -117163974 + L1MEd LINE L1 76 164 -5955 328 254 69 95 chr2 136092667 136092856 -117163727 - L2 LINE L2 -13 3300 3117 1473 214 10 3 chr2 136093206 136093514 -117163069 - AluJo SINE Alu 0 312 3 1234 209 6 39 chr2 136093575 136093886 -117162697 - AluJo SINE Alu -11 301 1 247 333 107 0 chr2 136095011 136095170 -117161413 + MIR SINE MIR 87 262 0 1076 269 95 23 chr2 136095494 136095885 -117160698 - MLT1J1 LTR MaLR -25 421 3 259 272 98 0 chr2 136095917 136096009 -117160574 - MLT1J1-int LTR MaLR -22 1713 1613 2261 200 56 19 chr2 136096527 136097013 -117159570 - LTR22 LTR ERVK -5 504 1 305 341 0 0 chr2 136097211 136097293 -117159290 - L2 LINE L2 0 3272 3191 449 288 128 0 chr2 136098564 136098807 -117157776 + L1ME4a LINE L1 5651 5924 -197 336 275 120 21 chr2 136100986 136101128 -117155455 - L1M4 LINE L1 -2795 3351 3196 1453 257 77 7 chr2 136101237 136101785 -117154798 - L1M4 LINE L1 -3010 3136 2551 9833 194 54 41 chr2 136101823 136102315 -117154268 - L1MB4 LINE L1 -40 6140 5656 888 161 0 0 chr2 136102315 136102445 -117154138 - FLAM_A SINE Alu 0 133 4 9833 194 54 41 chr2 136102445 136103468 -117153115 - L1MB4 LINE L1 -524 5656 4647 2299 75 3 10 chr2 136103468 136103773 -117152810 - AluY SINE Alu -8 303 1 9833 194 54 41 chr2 136103773 136105255 -117151328 - L1MB4 LINE L1 -1533 4647 3185 2179 67 24 7 chr2 136105255 136105552 -117151031 - AluY SINE Alu -9 302 1 9833 194 54 41 chr2 136105552 136106302 -117150281 - L1MB4 LINE L1 -2995 3185 2334 1910 144 0 0 chr2 136106302 136106600 -117149983 - AluSx SINE Alu -14 298 1 9833 194 54 41 chr2 136106600 136106728 -117149855 - L1MB4 LINE L1 -3846 2334 2209 2051 112 0 10 chr2 136106728 136107024 -117149559 - AluSx SINE Alu -8 304 12 2131 101 0 7 chr2 136107061 136107357 -117149226 + AluSg SINE Alu 3 296 -14 262 250 98 18 chr2 136107362 136107474 -117149109 + MER67C LTR ERV1 542 662 -48 1897 129 16 13 chr2 136108189 136108492 -117148091 + AluJb SINE Alu 1 304 -8 527 277 72 26 chr2 136108884 136109079 -117147504 - MIR SINE MIR -36 226 23 29 0 0 0 chr2 136109554 136109583 -117147000 + AT_rich Low_complexity Low_complexity 1 29 0 1815 132 16 3 chr2 136110492 136110796 -117145787 + AluSq SINE Alu 1 308 -5 456 149 106 11 chr2 136111327 136111421 -117145162 + MER4A LTR ERV1 1 103 -561 252 189 19 19 chr2 136111418 136111471 -117145112 + MER4A LTR ERV1 261 313 -351 * 225 158 53 0 chr2 136112534 136112591 -117143992 + (CTG)n Simple_repeat Simple_repeat 1 60 0 1905 125 4 0 chr2 136112653 136112964 -117143619 - AluSx SINE Alu 0 312 1 4320 200 19 13 chr2 136112964 136114202 -117142381 - L1M4 LINE L1 -3000 4565 3316 747 270 65 23 chr2 136114203 136114466 -117142117 - L1M4 LINE L1 -5812 1651 1378 1464 105 14 0 chr2 136114617 136114826 -117141757 - AluSx SINE Alu -26 284 73 539 87 0 0 chr2 136114954 136115023 -117141560 - AluSx SINE Alu -243 70 2 201 147 0 0 chr2 136115048 136115082 -117141501 + (TA)n Simple_repeat Simple_repeat 2 35 0 753 206 28 79 chr2 136115905 136116007 -117140576 - MER3 DNA MER1_type -6 203 116 2219 94 3 0 chr2 136116007 136116306 -117140277 - AluY SINE Alu -11 300 1 753 206 28 79 chr2 136116306 136116417 -117140166 - MER3 DNA MER1_type -93 116 1 327 250 67 30 chr2 136116442 136116715 -117139868 - L1MC/D LINE L1 -719 5432 5286 581 192 117 0 chr2 136116953 136117073 -117139510 + AluJ SINE Alu 2 135 -177 23 0 0 0 chr2 136117595 136117618 -117138965 + AT_rich Low_complexity Low_complexity 1 23 0 1530 201 27 74 chr2 136118719 136119163 -117137420 - MLT1D LTR MaLR -82 423 1 434 281 121 25 chr2 136119369 136119568 -117137015 + L3 LINE CR1 413 630 -947 749 186 158 14 chr2 136121665 136121886 -117134697 - Charlie5 DNA MER1_type 0 2624 2372 362 308 0 33 chr2 136121935 136122055 -117134528 + MIR SINE MIR 77 192 -70 1444 125 0 75 chr2 136122285 136122606 -117133977 + AluSx SINE Alu 9 305 -7 772 236 39 25 chr2 136122619 136122822 -117133761 + MIR SINE MIR 1 206 -56 3521 82 11 2 chr2 136131923 136132377 -117124206 + LTR22A LTR ERVK 1 458 0 311 123 0 49 chr2 136133341 136133422 -117123161 + (TG)n Simple_repeat Simple_repeat 2 78 0 435 202 20 0 chr2 136135587 136135686 -117120897 + FLAM_C SINE Alu 6 106 -37 626 150 53 0 chr2 136136099 136136232 -117120351 + AluJ SINE Alu 141 280 -32 198 208 0 0 chr2 136136232 136136280 -117120303 + A-rich Low_complexity Low_complexity 3 50 0 1982 104 3 7 chr2 136136604 136136901 -117119682 - AluSc SINE Alu -13 296 1 825 134 8 0 chr2 136137765 136137892 -117118691 + FLAM_C SINE Alu 5 132 -1 379 299 13 78 chr2 136137900 136138054 -117118529 + L1MC4a LINE L1 5699 5842 -1966 555 270 64 19 chr2 136138056 136138323 -117118260 + L1M4 LINE L1 4946 5224 -922 13534 129 36 37 chr2 136138325 136138527 -117118056 - Tigger1 DNA MER2_type 0 2418 2217 1277 192 24 28 chr2 136138527 136138818 -117117765 + AluJo SINE Alu 1 290 -22 13534 129 36 37 chr2 136138818 136139295 -117117288 - Tigger1 DNA MER2_type -201 2217 1741 2116 109 13 3 chr2 136139295 136139599 -117116984 - AluSc SINE Alu -2 307 1 13534 129 36 37 chr2 136139599 136140700 -117115883 - Tigger1 DNA MER2_type -677 1741 637 2027 128 0 16 chr2 136140700 136141012 -117115571 - AluJb SINE Alu -5 307 1 13534 129 36 37 chr2 136141012 136141595 -117114988 - Tigger1 DNA MER2_type -1781 637 55 206 62 31 0 chr2 136141596 136141628 -117114955 + (GAAA)n Simple_repeat Simple_repeat 2 34 0 973 214 67 11 chr2 136142098 136142383 -117114200 - L1 LINE L1 -912 5234 4934 2892 219 6 23 chr2 136143058 136143783 -117112800 - L1 LINE L1 -1173 4973 4262 1738 83 45 0 chr2 136143788 136144052 -117112531 + L1PB1 LINE L1 5254 5529 -622 1280 125 5 15 chr2 136144052 136144252 -117112331 + L1PB1 LINE L1 5952 6149 -2 2399 139 90 3 chr2 136144587 136144974 -117111609 - MER83 LTR ERV1 -27 421 1 411 211 20 41 chr2 136146514 136146661 -117109922 + GA-rich Low_complexity Low_complexity 2 145 0 813 167 29 6 chr2 136147305 136147479 -117109104 - L1MB2 LINE L1 -1 6170 5993 31 44 0 0 chr2 136147663 136147708 -117108875 + AT_rich Low_complexity Low_complexity 1 45 0 2988 204 52 37 chr2 136147838 136148722 -117107861 + L1 LINE L1 4440 5336 -810 563 249 92 77 chr2 136149844 136150567 -117106016 + HSREP522 Satellite telomeric 1 733 -168 338 236 41 0 chr2 136151751 136151874 -117104709 + CT-rich Low_complexity Low_complexity 2 129 0 898 114 7 14 chr2 136152049 136152189 -117104394 - MER85 DNA T2_type 0 139 1 2051 103 0 17 chr2 136152367 136152667 -117103916 + AluY SINE Alu 6 300 -11 298 243 43 0 chr2 136152728 136152798 -117103785 + L2 LINE L2 3170 3242 -71 1105 220 38 15 chr2 136353376 136353640 -116902943 - L1MB8 LINE L1 -6 6172 5903 23 0 0 0 chr2 136355682 136355705 -116900878 + AT_rich Low_complexity Low_complexity 1 23 0 6990 126 9 3 chr2 136356658 136357714 -116898869 + L1P LINE L1 3483 4545 -1601 378 191 18 73 chr2 136358168 136358278 -116898305 + MSTA LTR MaLR 56 159 -269 1450 217 6 43 chr2 136358285 136358630 -116897953 + MSTA-int LTR MaLR 1318 1649 -2 495 167 21 10 chr2 136358632 136358728 -116897855 + MSTA LTR MaLR 1 97 -331 252 188 94 82 chr2 136358824 136358909 -116897674 + THE1-int LTR MaLR 911 996 -584 * 641 256 188 26 chr2 136358878 136359112 -116897471 - THE1-int LTR MaLR -402 1178 907 1099 236 56 10 chr2 136359115 136359403 -116897180 + MSTA LTR MaLR 76 376 -52 438 246 147 3 chr2 136359420 136359574 -116897009 - MST-int LTR MaLR -963 661 463 * 5755 225 53 35 chr2 136359566 136361097 -116895486 + MSTA-int LTR MaLR 23 1580 -71 258 128 0 0 chr2 136361100 136361139 -116895444 + MST-int LTR MaLR 623 661 -990 328 159 0 48 chr2 136361173 136361236 -116895347 - MSTA LTR MaLR -52 376 317 355 197 13 0 chr2 136361238 136361314 -116895269 + MST-int LTR MaLR 1574 1650 -1 428 229 20 6 chr2 136361317 136361426 -116895157 + MSTA LTR MaLR 3 116 -248 345 245 118 0 chr2 136361459 136361561 -116895022 + MSTA LTR MaLR 58 171 -257 1461 204 3 41 chr2 136361564 136361907 -116894676 + MSTA-int LTR MaLR 1322 1651 0 475 183 21 11 chr2 136361910 136362003 -116894580 + MSTA LTR MaLR 4 97 -331 561 224 295 0 chr2 136362142 136362352 -116894231 - THE1-int LTR MaLR -402 1178 907 1000 251 61 8 chr2 136362379 136362642 -116893941 + MSTA LTR MaLR 98 374 -54 395 229 167 7 chr2 136362671 136362815 -116893768 - MST-int LTR MaLR -981 670 504 * 4876 249 59 15 chr2 136362810 136364106 -116892477 + MSTA-int LTR MaLR 28 1379 -272 1490 195 7 24 chr2 136364451 136364748 -116891835 - AluJo SINE Alu -10 302 11 1917 158 0 7 chr2 136364763 136365066 -116891517 - AluSx SINE Alu -6 306 6 2139 216 48 59 chr2 136365078 136365149 -116891434 - L1MB8 LINE L1 0 6178 6108 1454 219 3 3 chr2 136365149 136365455 -116891128 + AluJb SINE Alu 1 306 -6 2139 216 48 59 chr2 136365455 136366012 -116890571 - L1MB8 LINE L1 -70 6108 5557 529 272 0 0 chr2 136366014 136366128 -116890455 + FLAM_C SINE Alu 2 115 -28 365 219 14 0 chr2 136366164 136366237 -116890346 - L1MB8 LINE L1 -599 5567 5494 1562 214 3 7 chr2 136366237 136366532 -116890051 - AluJb SINE Alu -18 294 1 29 59 0 15 chr2 136366784 136366811 -116889772 + AT_rich Low_complexity Low_complexity 1 27 -40 573 144 10 10 chr2 136366811 136366908 -116889675 - L1PB1 LINE L1 -2 6149 6053 29 59 0 15 chr2 136366908 136366948 -116889635 + AT_rich Low_complexity Low_complexity 27 67 0 1952 145 7 0 chr2 136367202 136367522 -116889061 - AluSx SINE Alu 0 322 1 3330 229 125 9 chr2 136368411 136368851 -116887732 + L1MC4 LINE L1 6563 6951 -1091 2119 124 3 3 chr2 136368851 136369150 -116887433 + AluSx SINE Alu 1 299 -13 3330 229 125 9 chr2 136369150 136369709 -116886874 + L1MC4 LINE L1 6951 7678 -364 1704 260 83 40 chr2 136369700 136370415 -116886168 + L1M4 LINE L1 2808 3491 -2655 * 1691 209 58 0 chr2 136370415 136370760 -116885823 + MER47A DNA MER2_type 1 365 -1 1704 260 83 40 chr2 136370760 136370806 -116885777 + L1M4 LINE L1 3491 3534 -2612 2196 116 3 3 chr2 136370806 136371116 -116885467 + AluSp SINE Alu 1 310 -3 1704 260 83 40 chr2 136371116 136371365 -116885218 + L1M4 LINE L1 3534 3862 -2284 371 200 40 0 chr2 136371373 136371462 -116885121 + L1ME1 LINE L1 6086 6184 0 25 65 0 0 chr2 136372409 136372455 -116884128 + AT_rich Low_complexity Low_complexity 1 46 0 334 319 91 20 chr2 136372632 136372930 -116883653 - L1ME4a LINE L1 -157 5964 5646 4047 144 6 11 chr2 136372949 136373574 -116883009 - L1PA15 LINE L1 0 6165 5544 3900 150 114 17 chr2 136373584 136374331 -116882252 - LTR1B LTR ERV1 -7 819 1 1163 133 53 0 chr2 136374331 136374519 -116882064 - L1PA15 LINE L1 -621 5544 5347 443 125 411 0 chr2 136374524 136374636 -116881947 - LTR1B LTR ERV1 -242 584 427 1381 199 76 0 chr2 136374636 136374978 -116881605 - L1PA15 LINE L1 -809 5337 4970 2485 171 116 14 chr2 136374980 136376485 -116880098 - SATR1 Satellite Satellite 0 1659 1 2223 181 111 27 chr2 136376511 136378830 -116877753 + SATR1 Satellite Satellite 1 2511 -105 248 133 17 0 chr2 136378996 136379056 -116877527 + (TA)n Simple_repeat Simple_repeat 2 62 0 537 229 9 0 chr2 136381755 136381860 -116874723 + AluSg/x SINE Alu 190 295 -15 2183 103 0 58 chr2 136381916 136382245 -116874338 - AluSp SINE Alu -3 310 1 1311 266 44 47 chr2 136382562 136383133 -116873450 + L1ME2 LINE L1 5455 6023 -141 200 229 0 83 chr2 136384873 136384982 -116871601 + (TTGGGG)n Simple_repeat Simple_repeat 3 102 0 2295 164 113 23 chr2 136385614 136385670 -116870913 - SATR1 Satellite Satellite -1 2315 2265 2238 92 0 3 chr2 136385670 136385963 -116870620 - AluY SINE Alu -19 292 1 2295 164 113 23 chr2 136385963 136387738 -116868845 - SATR1 Satellite Satellite -51 2265 1 1353 177 47 42 chr2 136387811 136388152 -116868431 + MLT2B3 LTR ERVL 220 554 0 29 47 0 0 chr2 136389033 136389076 -116867507 + AT_rich Low_complexity Low_complexity 1 43 0 268 160 21 19 chr2 136389121 136389195 -116867388 - FLAM SINE Alu -16 117 74 24 0 0 0 chr2 136389521 136389545 -116867038 + AT_rich Low_complexity Low_complexity 1 24 0 1166 151 109 49 chr2 136389700 136390004 -116866579 + MER33 DNA MER1_type 1 322 -2 505 296 77 16 chr2 136392311 136392366 -116864217 - L1MC4 LINE L1 -72 7970 7920 243 0 0 0 chr2 136392366 136392393 -116864190 + (CA)n Simple_repeat Simple_repeat 2 28 0 505 296 77 16 chr2 136392393 136392534 -116864049 - L1MC4 LINE L1 -122 7920 7754 2096 121 0 23 chr2 136392534 136392841 -116863742 + AluY SINE Alu 1 300 -11 505 296 77 16 chr2 136392841 136392890 -116863693 - L1MC4 LINE L1 -288 7754 7709 2190 110 0 13 chr2 136392897 136393205 -116863378 - AluSx SINE Alu -8 304 1 2570 148 0 41 chr2 136393213 136393651 -116862932 - L1MC1 LINE L1 0 6333 5914 857 142 45 0 chr2 136394675 136394809 -116861774 - Tigger7 DNA MER2_type 0 2487 2348 694 149 52 39 chr2 136394815 136394969 -116861614 + MER21A LTR ERV1 747 902 -29 201 39 0 0 chr2 136395359 136395385 -116861198 + (CAA)n Simple_repeat Simple_repeat 2 27 0 633 236 0 24 chr2 136395422 136395545 -116861038 - FLAM_A SINE Alu -17 125 6 181 333 108 40 chr2 136395701 136395923 -116860660 - MIR SINE MIR -6 256 20 247 272 56 56 chr2 136397610 136397735 -116858848 + Tigger8 DNA MER2_type 509 633 -33 552 220 0 10 chr2 136398964 136399064 -116857519 + FLAM_A SINE Alu 1 99 -43 1919 151 0 27 chr2 136399315 136399607 -116856976 + AluSx SINE Alu 1 284 -28 361 0 0 0 chr2 136399607 136399647 -116856936 + (TAAAA)n Simple_repeat Simple_repeat 2 115 0 1324 154 5 36 chr2 136399763 136399983 -116856600 + AluSg/x SINE Alu 72 336 0 469 0 0 0 chr2 136399983 136400035 -116856548 + (TAAAA)n Simple_repeat Simple_repeat 2 105 0 1030 241 30 54 chr2 136400206 136400501 -116856082 - AluJb SINE Alu -12 300 13 5785 66 3 0 chr2 136400873 136401649 -116854934 - L1PA5 LINE L1 -1 6153 5376 1543 204 4 4 chr2 136402034 136402314 -116854269 - AluJb SINE Alu -30 282 3 1371 236 0 24 chr2 136402348 136402644 -116853939 + AluJo SINE Alu 1 289 -23 2240 102 0 0 chr2 136402839 136403134 -116853449 + AluY SINE Alu 1 295 -16 265 173 198 12 chr2 136403990 136404071 -116852512 - MER5A DNA MER1_type -84 105 10 209 261 0 0 chr2 136406236 136406282 -116850301 + (TG)n Simple_repeat Simple_repeat 1 46 0 1952 155 0 0 chr2 136407270 136407573 -116849010 - AluSx SINE Alu -4 308 6 1977 139 7 19 chr2 136409342 136409689 -116846894 + AluSp SINE Alu 2 313 0 1964 157 7 0 chr2 136410077 136410377 -116846206 + AluSx SINE Alu 1 302 -10 211 200 0 0 chr2 136410656 136410696 -116845887 + L2 LINE L2 3262 3301 -12 1306 260 31 0 chr2 136410917 136411209 -116845374 - AluJo SINE Alu -11 301 1 26 30 0 0 chr2 136411905 136411938 -116844645 + AT_rich Low_complexity Low_complexity 1 33 0 24 32 0 0 chr2 136412920 136412951 -116843632 + AT_rich Low_complexity Low_complexity 1 31 0 580 56 22 22 chr2 136413947 136414036 -116842547 + L1PA5 LINE L1 6066 6154 0 28 48 0 0 chr2 136415687 136415729 -116840854 + AT_rich Low_complexity Low_complexity 1 42 0 2392 106 0 0 chr2 136416042 136416345 -116840238 - AluSq SINE Alu -10 303 1 261 204 10 41 chr2 136416357 136416455 -116840128 + (TA)n Simple_repeat Simple_repeat 1 95 0 1833 156 17 3 chr2 136416878 136417173 -116839410 + AluSq SINE Alu 13 311 -2 30 0 0 0 chr2 136417295 136417325 -116839258 + AT_rich Low_complexity Low_complexity 1 30 0 2477 191 50 9 chr2 136417728 136418268 -116838315 + MER68 LTR ERV1 1 562 0 1353 193 3 74 chr2 136418635 136418961 -116837622 + AluJb SINE Alu 1 303 -9 894 164 0 7 chr2 136418996 136419136 -116837447 + FAM SINE Alu 22 160 -25 246 236 0 18 chr2 136419438 136419493 -116837090 + (TG)n Simple_repeat Simple_repeat 1 54 0 1843 205 33 12 chr2 136419745 136420169 -116836414 + Tigger2a DNA MER2_type 1 433 -1 22 0 0 0 chr2 136420440 136420462 -116836121 + AT_rich Low_complexity Low_complexity 1 22 0 215 316 79 9 chr2 136421001 136421115 -116835468 + MIR SINE MIR 94 215 -47 222 154 22 66 chr2 136421545 136421727 -116834856 + T-rich Low_complexity Low_complexity 5 178 0 269 268 0 0 chr2 136421952 136422008 -116834575 + (TG)n Simple_repeat Simple_repeat 1 56 0 1843 205 33 12 chr2 136422260 136422684 -116833899 + Tigger2a DNA MER2_type 1 433 -1 22 0 0 0 chr2 136422955 136422977 -116833606 + AT_rich Low_complexity Low_complexity 1 22 0 215 316 79 9 chr2 136423516 136423630 -116832953 + MIR SINE MIR 94 215 -47 540 217 0 0 chr2 136424294 136424400 -116832183 - U6 snRNA snRNA -1 106 1 584 165 124 25 chr2 136425350 136425516 -116831067 + FLAM_C SINE Alu 1 178 0 234 220 0 0 chr2 136426338 136426397 -116830186 + (TAA)n Simple_repeat Simple_repeat 2 60 0 2270 110 0 0 chr2 136426431 136426723 -116829860 + AluSc SINE Alu 1 292 -17 190 287 191 17 chr2 136427419 136427534 -116829049 + L2 LINE L2 3138 3272 0 21 0 0 0 chr2 136428197 136428218 -116828365 + AT_rich Low_complexity Low_complexity 1 21 0 399 262 83 21 chr2 136428599 136428834 -116827749 - MER102b DNA MER1_type -1 340 81 21 57 0 0 chr2 136429058 136429093 -116827490 + AT_rich Low_complexity Low_complexity 1 35 0 305 172 267 121 chr2 136429723 136429865 -116826718 - FLAM_A SINE Alu 0 159 1 232 297 81 45 chr2 136429884 136429995 -116826588 + MER5A DNA MER1_type 69 183 -6 445 283 176 44 chr2 136431583 136431788 -116824795 + MIR SINE MIR 20 251 -11 1559 188 31 7 chr2 136431792 136432079 -116824504 - AluJo SINE Alu -18 294 1 294 221 140 59 chr2 136432179 136432315 -116824268 + MER104 DNA Tc2 34 180 0 224 241 0 35 chr2 136432764 136432822 -116823761 + L2 LINE L2 3216 3271 -1 437 158 18 26 chr2 136433914 136434028 -116822555 + MSTA-int LTR MaLR 1539 1651 0 443 219 10 0 chr2 136434028 136434124 -116822459 + MSTA LTR MaLR 1 97 -331 249 245 39 78 chr2 136434169 136434271 -116822312 + MSTA LTR MaLR 74 171 -257 971 242 16 32 chr2 136434277 136434591 -116821992 + MSTA-int LTR MaLR 1341 1649 -2 370 215 11 0 chr2 136434593 136434686 -116821897 + MSTA LTR MaLR 1 94 -334 262 179 18 0 chr2 136434787 136434843 -116821740 + MST-int LTR MaLR 979 1035 -616 * 570 242 196 21 chr2 136434834 136435074 -116821509 - THE1-int LTR MaLR -392 1188 907 712 236 68 51 chr2 136435078 136435370 -116821213 + MSTA LTR MaLR 76 372 -56 509 181 173 8 chr2 136435408 136435541 -116821042 - MST-int LTR MaLR -990 661 507 5583 229 62 21 chr2 136435545 136437099 -116819484 + MSTA-int LTR MaLR 34 1651 0 464 214 19 0 chr2 136437099 136437202 -116819381 + MSTA LTR MaLR 1 105 -323 251 277 109 0 chr2 136437245 136437346 -116819237 + MSTA LTR MaLR 60 171 -257 1288 189 36 45 chr2 136437348 136437682 -116818901 + MSTA-int LTR MaLR 1321 1651 0 276 197 33 0 chr2 136437684 136437745 -116818838 + MSTA LTR MaLR 3 65 -363 223 234 0 31 chr2 136437799 136437863 -116818720 + (GGGTG)n Simple_repeat Simple_repeat 3 64 0 226 196 22 0 chr2 136437871 136437917 -116818666 + THE1-int LTR MaLR 921 967 -613 * 596 246 194 22 chr2 136437915 136438147 -116818436 - THE1-int LTR MaLR -402 1178 907 949 220 71 11 chr2 136438151 136438433 -116818150 + MSTA LTR MaLR 76 374 -54 460 220 156 7 chr2 136438463 136438604 -116817979 - MST-int LTR MaLR -984 667 506 * 4301 246 65 24 chr2 136438601 136439909 -116816674 + MSTA-int LTR MaLR 28 1389 -262 475 207 9 0 chr2 136439905 136440021 -116816562 + MSTA-int LTR MaLR 1535 1651 0 * 456 174 20 10 chr2 136440021 136440119 -116816464 + MSTA LTR MaLR 1 99 -329 249 290 75 0 chr2 136440168 136440261 -116816322 + MSTA LTR MaLR 60 159 -269 1018 227 86 16 chr2 136440267 136440580 -116816003 + MSTB-int LTR MaLR 1317 1651 0 291 193 91 0 chr2 136440580 136440668 -116815915 + MSTB LTR MaLR 1 96 -330 249 184 21 0 chr2 136440746 136440802 -116815781 + THE1-int LTR MaLR 921 967 -613 * 772 209 189 20 chr2 136440790 136441034 -116815549 - THE1-int LTR MaLR -389 1191 907 400 294 28 7 chr2 136441080 136441223 -116815360 + MSTA LTR MaLR 129 274 -154 261 202 0 34 chr2 136441556 136441645 -116814938 - HSAT5 Satellite Satellite 0 86 1 573 88 0 6 chr2 136441865 136441963 -116814620 - HSAT5 Satellite Satellite 0 97 1 6641 186 61 5 chr2 136444219 136445512 -116811071 + L1PA12 LINE L1 637 2002 -5579 342 240 0 0 chr2 136445615 136445690 -116810893 - L1PA13 LINE L1 -6244 1330 1256 425 171 0 0 chr2 136445699 136445769 -116810814 - L1PA13 LINE L1 -6251 1330 1261 2806 249 58 24 chr2 136445789 136448196 -116808387 + L1PA13 LINE L1 482 3044 -3753 2410 193 161 72 chr2 136448206 136449188 -116807395 + MER4-int LTR ERV1 29 1097 -5501 12046 51 5 1 chr2 136449196 136451506 -116805077 - L1PA7 LINE L1 0 6154 3835 1934 139 7 4 chr2 136451507 136451787 -116804796 - AluSc SINE Alu -28 281 1 221 252 261 27 chr2 136452763 136452874 -116803709 + L2 LINE L2 2909 3045 -227 768 200 38 25 chr2 136453729 136453964 -116802619 - L1MC4 LINE L1 -668 7374 7137 744 238 22 0 chr2 136454006 136454187 -116802396 - L1MC4 LINE L1 -1039 7003 6819 278 204 26 44 chr2 136454745 136454945 -116801638 - HSAT5 Satellite Satellite -1 196 1 573 88 0 6 chr2 136455937 136456035 -116800548 + HSAT5 Satellite Satellite 1 97 -3 261 202 0 34 chr2 136456255 136456344 -116800239 + HSAT5 Satellite Satellite 1 86 0 400 294 28 7 chr2 136456677 136456820 -116799763 - MSTA LTR MaLR -154 274 129 772 209 189 20 chr2 136456866 136457110 -116799473 + THE1-int LTR MaLR 907 1191 -389 249 184 21 0 chr2 136457098 136457154 -116799429 - THE1-int LTR MaLR -613 967 921 * 291 193 91 0 chr2 136457232 136457320 -116799263 - MSTA LTR MaLR -330 96 1 1018 227 86 16 chr2 136457320 136457633 -116798950 - MSTA-int LTR MaLR 0 1651 1317 249 290 75 0 chr2 136457639 136457732 -116798851 - MSTA LTR MaLR -269 159 60 456 174 20 10 chr2 136457781 136457879 -116798704 - MSTA LTR MaLR -329 99 1 453 200 9 0 chr2 136457879 136457989 -116798594 - MSTA-int LTR MaLR 0 1651 1541 4222 252 70 8 chr2 136457991 136459270 -116797313 - MSTA-int LTR MaLR -262 1389 32 440 221 168 0 chr2 136459272 136459403 -116797180 + MST-int LTR MaLR 507 659 -992 980 210 58 44 chr2 136459441 136459736 -116796847 - MSTA LTR MaLR -54 374 76 782 206 189 21 chr2 136459740 136459973 -116796610 + THE1-int LTR MaLR 907 1178 -402 232 232 18 0 chr2 136459971 136460027 -116796556 - MST-int LTR MaLR -616 1035 979 * 269 293 9 0 chr2 136460138 136460244 -116796339 - MST-int LTR MaLR -1517 134 28 * 393 219 157 2 chr2 136460241 136460393 -116796190 + MST-int LTR MaLR 465 661 -959 1212 227 30 41 chr2 136460408 136460774 -116795809 - MSTA LTR MaLR -52 376 15 28 48 0 0 chr2 136461726 136461768 -116794815 + AT_rich Low_complexity Low_complexity 1 42 0 1982 148 0 3 chr2 136462081 136462385 -116794198 - AluSq SINE Alu -10 303 1 319 280 75 27 chr2 136462504 136462708 -116793875 + L1MB8 LINE L1 5401 5619 -526 989 220 38 15 chr2 136463257 136463521 -116793062 + L1MB8 LINE L1 5903 6172 -6 416 325 51 13 chr2 136464250 136464407 -116792176 - L2 LINE L2 -430 2884 2722 23 33 0 0 chr2 136464621 136464651 -116791932 + AT_rich Low_complexity Low_complexity 1 30 0 1615 223 76 32 chr2 136465482 136465980 -116790603 - L1MB8 LINE L1 -6 6172 5653 190 250 50 0 chr2 136466993 136467053 -116789530 - MIR SINE MIR -2 260 198 1384 174 0 38 chr2 136467076 136467341 -116789242 + AluJb SINE Alu 38 292 -20 2064 155 0 16 chr2 136467759 136468076 -116788507 + AluSx SINE Alu 1 312 0 1894 146 7 3 chr2 136468420 136468708 -116787875 + AluSg SINE Alu 3 291 -19 1901 127 65 0 chr2 136470042 136470333 -116786250 - AluSg SINE Alu 0 310 1 302 172 0 16 chr2 136470601 136470665 -116785918 + MER34C LTR ERV1 423 485 -100 24 32 0 0 chr2 136470672 136470703 -116785880 + AT_rich Low_complexity Low_complexity 1 31 0 1876 159 22 0 chr2 136471279 136471575 -116785008 + AluSq SINE Alu 1 302 0 3030 139 28 4 chr2 136471951 136472453 -116784130 - L1PA10 LINE L1 0 6168 5655 772 166 95 50 chr2 136472549 136472834 -116783749 - MER4D LTR ERV1 -391 489 86 1017 209 87 28 chr2 136473116 136473437 -116783146 - L1MB8 LINE L1 -6 6172 5833 1839 144 99 5 chr2 136473448 136473842 -116782741 - MER61C LTR ERV1 -10 424 5 2220 197 46 43 chr2 136473851 136474905 -116781678 - L1MB8 LINE L1 -342 5836 4776 613 288 89 16 chr2 136476249 136476627 -116779956 - MLT1G1 LTR MaLR -34 561 79 1262 162 66 4 chr2 136476663 136476934 -116779649 - L1MA5 LINE L1 -6 6294 6007 1198 215 28 8 chr2 136477007 136477254 -116779329 - AluJo SINE Alu -48 264 13 2788 222 21 13 chr2 136477267 136478396 -116778187 - L1MA5 LINE L1 -354 5946 4808 1426 216 21 10 chr2 136478508 136478799 -116777784 - AluJo SINE Alu -6 296 3 750 101 0 0 chr2 136479605 136479714 -116776869 + (TA)n Simple_repeat Simple_repeat 2 110 0 24 0 0 0 chr2 136480108 136480132 -116776451 + AT_rich Low_complexity Low_complexity 1 24 0 377 238 0 0 chr2 136481635 136481736 -116774847 - L1MA9 LINE L1 -49 6263 6163 1060 172 0 0 chr2 136482686 136482860 -116773723 - AluSg/x SINE Alu -12 300 127 912 128 7 28 chr2 136482988 136483129 -116773454 + AluSg/x SINE Alu 161 298 -11 1928 156 17 0 chr2 136483309 136483611 -116772972 + AluSx SINE Alu 3 309 -3 3965 182 29 27 chr2 136483647 136484791 -116771792 + L1PA16 LINE L1 5026 6166 0 12940 28 0 3 chr2 136484938 136487262 -116769321 - L1PA3 LINE L1 -2 6153 3835 2040 139 0 0 chr2 136487263 136487544 -116769039 - AluSc SINE Alu -28 281 1 200 292 173 53 chr2 136488360 136488632 -116767951 + L2 LINE L2 2745 3045 -227 768 200 38 25 chr2 136489487 136489722 -116766861 - L1MC4 LINE L1 -668 7374 7137 744 238 22 0 chr2 136489764 136489945 -116766638 - L1MC4 LINE L1 -1039 7003 6819 278 204 26 44 chr2 136490503 136490703 -116765880 - HSAT5 Satellite Satellite -1 196 1 244 247 12 12 chr2 136490957 136491042 -116765541 - HSAT5 Satellite Satellite -1 85 1 246 193 0 0 chr2 136491479 136491536 -116765047 + (CA)n Simple_repeat Simple_repeat 2 58 0 2368 53 63 42 chr2 136491781 136492218 -116764365 - SN5 Other centromeric 0 455 1 1379 237 95 3 chr2 136493885 136494222 -116762361 + MSTA LTR MaLR 1 368 -60 1223 204 0 0 chr2 136494259 136494490 -116762093 + MSTA-int LTR MaLR 20 250 -1401 * 1305 171 16 20 chr2 136494487 136494739 -116761844 + MSTA-int LTR MaLR 1401 1651 0 1434 231 29 32 chr2 136494739 136495116 -116761467 + MSTA LTR MaLR 1 376 -52 451 232 162 0 chr2 136495141 136495283 -116761300 - MST-int LTR MaLR -981 670 506 306 293 9 0 chr2 136495280 136495386 -116761197 + MSTA-int LTR MaLR 28 134 -1517 * 260 200 94 82 chr2 136495497 136495582 -116761001 + MSTA-int LTR MaLR 911 996 -584 * 887 206 189 21 chr2 136495551 136495784 -116760799 - THE1-int LTR MaLR -402 1178 907 1110 209 57 44 chr2 136495788 136496085 -116760498 + MSTA LTR MaLR 76 376 -52 494 221 168 0 chr2 136496121 136496252 -116760331 - MST-int LTR MaLR -992 659 507 * 5732 241 61 21 chr2 136496250 136497812 -116758771 + MSTA-int LTR MaLR 28 1651 0 3394 148 11 11 chr2 136497979 136498534 -116758049 - L1PA15 LINE L1 -67 6098 5544 3443 152 130 19 chr2 136498544 136499281 -116757302 - LTR1B LTR ERV1 -7 819 1 508 209 101 6 chr2 136499284 136499442 -116757141 - L1PA15 LINE L1 -625 5540 5368 23 0 0 0 chr2 136499653 136499676 -116756907 + AT_rich Low_complexity Low_complexity 1 23 0 6229 75 216 11 chr2 136499876 136500867 -116755716 + L1P LINE L1 614 1807 -4339 1537 224 54 8 chr2 136502756 136503108 -116753475 + MSTA LTR MaLR 1 368 -60 1275 186 4 0 chr2 136503137 136503374 -116753209 + MSTA-int LTR MaLR 13 250 -1401 * 1299 179 8 12 chr2 136503371 136503623 -116752960 + MSTA-int LTR MaLR 1401 1651 0 956 254 18 45 chr2 136503623 136503919 -116752664 + MSTA LTR MaLR 1 296 -136 396 205 0 12 chr2 136504240 136504339 -116752244 - HSAT5 Satellite Satellite -3 97 1 634 119 0 32 chr2 136504500 136504686 -116751897 - HSAT5 Satellite Satellite 0 180 1 253 190 10 160 chr2 136504702 136504802 -116751781 - HSAT5 Satellite Satellite -1 85 1 242 336 34 7 chr2 136508753 136508892 -116747691 + MIR SINE MIR 66 208 -54 228 225 14 42 chr2 136509067 136509138 -116747445 + (TG)n Simple_repeat Simple_repeat 2 70 0 1137 276 19 0 chr2 136509240 136509552 -116747031 + LTR16C LTR ERVL 146 463 -28 294 284 25 0 chr2 136509542 136509623 -116746960 + LTR16C LTR ERVL 409 491 0 * 392 297 0 0 chr2 136509670 136509771 -116746812 - MIR SINE MIR -139 123 23 438 306 140 22 chr2 136509906 136510128 -116746455 - MIR SINE MIR 0 262 15 416 295 46 6 chr2 136510466 136510639 -116745944 - LTR33 LTR ERVL -63 458 279 353 310 132 27 chr2 136511494 136511752 -116744831 + L2 LINE L2 2995 3279 -34 1566 185 182 3 chr2 136511806 136512196 -116744387 + LTR46 LTR ERV1 1 460 0 264 301 148 4 chr2 136512201 136512320 -116744263 - MIR SINE MIR -58 150 18 228 67 0 0 chr2 136512694 136512724 -116743859 + (T)n Simple_repeat Simple_repeat 1 30 0 680 303 60 42 chr2 136512803 136513183 -116743400 + MLT1K LTR MaLR 200 586 -2 467 151 290 0 chr2 136513410 136513503 -116743080 - FLAM_C SINE Alu -22 121 2 242 208 0 0 chr2 136513555 136513603 -116742980 + (TG)n Simple_repeat Simple_repeat 2 49 0 231 321 0 25 chr2 136513617 136513698 -116742885 + MIR SINE MIR 160 238 -24 3184 136 20 4 chr2 136515722 136516230 -116740353 - L1PB1 LINE L1 -5 6146 5631 1448 205 0 17 chr2 136516703 136517001 -116739582 - AluJo SINE Alu -19 293 1 459 315 50 36 chr2 136517504 136517726 -116738857 - L1MC/D LINE L1 -2249 5559 5335 1579 179 3 47 chr2 136518720 136519039 -116737544 - AluJo SINE Alu -7 305 1 199 235 188 12 chr2 136519151 136519236 -116737347 - MIR SINE MIR -74 188 89 698 145 16 48 chr2 136519843 136520029 -116736554 + (ATGGTG)n Simple_repeat Simple_repeat 1 180 0 846 135 17 22 chr2 136520053 136520231 -116736352 + (ATGGTG)n Simple_repeat Simple_repeat 4 180 0 230 313 122 26 chr2 136520271 136520449 -116736134 - MIR SINE MIR -29 233 41 227 222 0 37 chr2 136520764 136520845 -116735738 - L1ME4a LINE L1 0 6121 6044 620 293 21 16 chr2 136520936 136521178 -116735405 - L1ME4a LINE L1 -299 5822 5580 2080 119 3 0 chr2 136521475 136521770 -116734813 - AluSq SINE Alu -17 296 1 864 127 30 0 chr2 136522411 136522545 -116734038 - MLT2A1 LTR ERVL 0 444 307 1006 208 107 67 chr2 136523891 136524294 -116732289 + MLT1D LTR MaLR 5 423 -82 2053 123 7 0 chr2 136525346 136525648 -116730935 - AluY SINE Alu -7 304 1 409 266 101 30 chr2 136526014 136526183 -116730400 + MIR SINE MIR 81 261 -1 473 223 24 0 chr2 136526191 136526401 -116730182 + (ATGGTG)n Simple_repeat Simple_repeat 1 215 0 290 109 22 0 chr2 136526446 136526492 -116730091 - AluSg/x SINE Alu -78 222 176 459 232 11 17 chr2 136526495 136526672 -116729911 + (ATGGTG)n Simple_repeat Simple_repeat 4 179 0 1933 199 10 19 chr2 136526734 136527145 -116729438 - L1MB5 LINE L1 -8 6166 5760 1171 204 17 30 chr2 136527152 136527451 -116729132 + AluJb SINE Alu 17 311 -1 242 296 42 61 chr2 136527463 136527676 -116728907 + L1M4 LINE L1 4789 4997 -1149 3861 176 41 27 chr2 136528937 136529043 -116727540 - L1PA16 LINE L1 -90 6779 6676 1890 145 3 0 chr2 136529043 136529353 -116727230 - AluSx SINE Alu -1 311 1 3861 176 41 27 chr2 136529353 136530227 -116726356 - L1PA16 LINE L1 -193 6676 5783 5426 37 0 0 chr2 136530227 136530887 -116725696 + L1PA3 LINE L1 5508 6167 0 2056 233 17 14 chr2 136530893 136531412 -116725171 - L1PA16 LINE L1 -1081 5768 5248 320 262 107 16 chr2 136531425 136531547 -116725036 - L1 LINE L1 -3459 2687 2555 271 145 0 0 chr2 136531558 136531607 -116724976 - L1PA16 LINE L1 -3666 3183 3135 1438 164 0 0 chr2 136531641 136531866 -116724717 - L1PA16 LINE L1 -6622 227 3 1471 148 0 0 chr2 136532640 136532869 -116723714 + AluSq SINE Alu 78 306 -7 817 244 19 19 chr2 136533189 136533402 -116723181 - MER4D LTR ERV1 -8 895 683 5744 235 57 23 chr2 136533431 136535713 -116720870 + L1M3 LINE L1 3246 5610 -570 2175 163 39 25 chr2 136536745 136537272 -116719311 + TAR1 Satellite telomeric 1 534 -43 320 116 0 47 chr2 136537416 136537502 -116719081 + (TTAGGG)n Simple_repeat Simple_repeat 2 83 0 614 67 7 60 chr2 136537538 136537687 -116718896 + (TTAGGG)n Simple_repeat Simple_repeat 1 141 0 1312 278 3 0 chr2 136537691 136538062 -116718521 - L1 LINE L1 -930 5216 4845 2917 225 61 32 chr2 136538065 136539677 -116716906 + L1ME1 LINE L1 4410 6140 -26 24 77 0 0 chr2 136540720 136540772 -116715811 + AT_rich Low_complexity Low_complexity 1 52 0 180 292 21 0 chr2 136540850 136540898 -116715685 + L3 LINE CR1 1317 1365 -212 * 523 273 40 40 chr2 136540870 136541046 -116715537 + MIR SINE MIR 41 216 -46 532 240 136 0 chr2 136541519 136541673 -116714910 - MIR SINE MIR -27 235 61 183 42 0 0 chr2 136542563 136542587 -116713996 + (CCTA)n Simple_repeat Simple_repeat 3 26 0 232 180 131 0 chr2 136543749 136543810 -116712773 + L1M4 LINE L1 2757 2825 -3321 315 195 98 0 chr2 136543832 136543914 -116712669 + LTR50 LTR ERVL 1 90 -705 989 228 103 54 chr2 136544141 136544378 -116712205 + LTR50 LTR ERVL 426 687 -108 2010 124 7 7 chr2 136544378 136544677 -116711906 - AluSg SINE Alu -11 299 1 989 228 103 54 chr2 136544677 136544790 -116711793 + LTR50 LTR ERVL 687 793 -2 227 159 91 0 chr2 136544794 136544838 -116711745 + L1M4 LINE L1 2853 2900 -3246 463 210 85 128 chr2 136544854 136545026 -116711557 + L1M4 LINE L1 3531 3688 -2458 1970 109 0 101 chr2 136545026 136545373 -116711210 + AluSx SINE Alu 1 312 0 463 210 85 128 chr2 136545373 136545481 -116711102 + L1M4 LINE L1 3688 3799 -2347 389 267 42 0 chr2 136545551 136545671 -116710912 + L1M4 LINE L1 3993 4117 -2029 21 0 0 0 chr2 136545711 136545732 -116710851 + AT_rich Low_complexity Low_complexity 1 21 0 249 268 59 26 chr2 136545784 136545937 -116710646 + L1ME3A LINE L1 4862 5019 -1127 832 255 71 98 chr2 136545938 136546502 -116710081 + L1ME3A LINE L1 5609 6157 -13 3023 152 57 2 chr2 136546527 136547072 -116709511 + L1MC2 LINE L1 5770 6344 0 349 271 10 0 chr2 136547303 136547399 -116709184 + GA-rich Low_complexity Low_complexity 1 97 0 1665 182 0 24 chr2 136548076 136548372 -116708211 - AluJb SINE Alu -23 289 1 966 217 49 34 chr2 136548508 136548771 -116707812 - L1ME2 LINE L1 -116 6048 5782 23 54 0 0 chr2 136549200 136549237 -116707346 + AT_rich Low_complexity Low_complexity 1 37 0 28072 41 104 2 chr2 136549927 136553564 -116703019 - L1P LINE L1 -1532 4614 607 1516 171 38 29 chr2 136553561 136553946 -116702637 - L1MC2 LINE L1 -111 6055 5246 * 3714 198 34 57 chr2 136553952 136554931 -116701652 + L1MC2 LINE L1 4287 5242 -904 2415 65 7 0 chr2 136554966 136555259 -116701324 - L1PA5 LINE L1 -1 6153 5859 396 0 0 0 chr2 136555259 136555303 -116701280 + (TA)n Simple_repeat Simple_repeat 2 45 0 336 32 0 111 chr2 136555797 136555860 -116700723 + AluY SINE Alu 246 301 0 399 41 0 0 chr2 136558020 136558069 -116698514 + (TG)n Simple_repeat Simple_repeat 1 49 0 1631 141 8 4 chr2 136558198 136558446 -116698137 + AluSx SINE Alu 45 293 -19 644 126 126 8 chr2 136559815 136559934 -116696649 - AluJb SINE Alu -179 133 1 230 257 9 37 chr2 136561071 136561180 -116695403 + G-rich Low_complexity Low_complexity 5 110 0 2141 184 46 32 chr2 136561317 136561778 -116694805 + MLT1C LTR MaLR 1 467 0 468 215 177 23 chr2 136561871 136562001 -116694582 + MLT1H LTR MaLR 12 161 -388 932 182 97 0 chr2 136562310 136562486 -116694097 - AluJb SINE Alu -119 193 1 316 336 0 20 chr2 136562642 136562788 -116693795 + L1 LINE L1 2872 3014 -3132 463 252 19 0 chr2 136562884 136562991 -116693592 - MIR SINE MIR -44 218 110 1948 135 7 0 chr2 136563071 136563367 -116693216 - AluSq SINE Alu -15 298 1 352 230 54 123 chr2 136563647 136563851 -116692732 + L1 LINE L1 3589 3778 -2368 1248 177 123 15 chr2 136564141 136564401 -116692182 + AluJo SINE Alu 1 288 -24 313 202 0 16 chr2 136564607 136564736 -116691847 + CT-rich Low_complexity Low_complexity 2 128 0 561 199 0 0 chr2 136564761 136564922 -116691661 + CT-rich Low_complexity Low_complexity 1 161 0 528 220 0 0 chr2 136564973 136565126 -116691457 + CT-rich Low_complexity Low_complexity 2 157 -21 1822 86 4 8 chr2 136565126 136565370 -116691213 - AluY SINE Alu -68 243 1 528 220 0 0 chr2 136565370 136565393 -116691190 + CT-rich Low_complexity Low_complexity 156 178 0 279 155 70 0 chr2 136565393 136565464 -116691119 + (TCTG)n Simple_repeat Simple_repeat 2 77 0 564 204 0 0 chr2 136565471 136565647 -116690936 + CT-rich Low_complexity Low_complexity 1 176 0 635 182 0 11 chr2 136565669 136565850 -116690733 + CT-rich Low_complexity Low_complexity 1 179 0 432 200 0 0 chr2 136565868 136565998 -116690585 + CT-rich Low_complexity Low_complexity 2 131 0 437 171 22 95 chr2 136566008 136566151 -116690432 + MER39B LTR ERV1 192 411 -242 1642 128 51 22 chr2 136566284 136566580 -116690003 + AluSx SINE Alu 1 304 0 195 162 0 0 chr2 136567703 136567740 -116688843 + (TTG)n Simple_repeat Simple_repeat 2 38 0 451 149 0 18 chr2 136567826 136567940 -116688643 + (TC)n Simple_repeat Simple_repeat 2 113 0 723 188 3 0 chr2 136567957 136568319 -116688264 + CT-rich Low_complexity Low_complexity 1 363 0 418 165 6 35 chr2 136568293 136568463 -116688120 + (TCTCTG)n Simple_repeat Simple_repeat 4 168 0 * 690 179 0 0 chr2 136568479 136568652 -116687931 + CT-rich Low_complexity Low_complexity 2 174 0 205 190 52 0 chr2 136568652 136568710 -116687873 + (TCTG)n Simple_repeat Simple_repeat 1 61 0 636 191 0 0 chr2 136568710 136568883 -116687700 + CT-rich Low_complexity Low_complexity 2 174 0 278 113 14 71 chr2 136568899 136569040 -116687543 - HERV17 LTR ERV1 -7785 841 709 345 198 0 0 chr2 136569043 136569154 -116687429 + CT-rich Low_complexity Low_complexity 2 112 0 230 246 0 0 chr2 136569557 136569622 -116686961 - L1MC/D LINE L1 -630 5729 5665 183 42 0 0 chr2 136570159 136570183 -116686400 + (GGGTG)n Simple_repeat Simple_repeat 3 26 0 875 131 166 23 chr2 136570443 136570618 -116685965 - AluSg/x SINE Alu -17 295 96 225 0 0 0 chr2 136571393 136571418 -116685165 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2230 105 0 3 chr2 136571420 136571716 -116684867 - AluSc SINE Alu -14 295 1 186 43 0 0 chr2 136572112 136572135 -116684448 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5353 37 0 2 chr2 136574431 136575072 -116681511 - L1P LINE L1 -932 5214 4575 4954 35 2 7 chr2 136575072 136575624 -116680959 + L1PA3 LINE L1 5593 6153 -2 228 275 28 37 chr2 136575753 136575862 -116680721 - LTR54B LTR ERV1 -352 146 39 614 168 0 132 chr2 136576206 136576373 -116680210 + AluJb SINE Alu 136 280 -32 246 62 0 0 chr2 136576376 136576408 -116680175 + (CAGG)n Simple_repeat Simple_repeat 3 34 0 1971 106 14 7 chr2 136576467 136576750 -116679833 - AluSp SINE Alu -14 299 15 32 43 0 0 chr2 136576771 136576817 -116679766 + AT_rich Low_complexity Low_complexity 1 46 0 1998 274 68 59 chr2 136576917 136577157 -116679426 + L2 LINE L2 899 1135 -2179 2131 125 0 0 chr2 136577157 136577452 -116679131 + AluSq SINE Alu 5 299 -14 1998 274 68 59 chr2 136577452 136578290 -116678293 + L2 LINE L2 1135 1986 -1328 25 65 0 0 chr2 136578339 136578385 -116678198 + AT_rich Low_complexity Low_complexity 1 46 0 497 251 93 104 chr2 136578559 136578913 -116677670 - HAL1 LINE L1 -608 1899 1550 591 311 67 42 chr2 136578972 136579595 -116676988 + HAL1 LINE L1 1109 1747 -760 2263 94 3 10 chr2 136579764 136580072 -116676511 + AluY SINE Alu 1 306 -5 863 282 26 13 chr2 136580090 136580317 -116676266 + AluJo SINE Alu 1 230 -82 5092 177 20 10 chr2 136580470 136581285 -116675298 - L1P5 LINE L1 -438 5713 4872 2247 101 0 0 chr2 136581285 136581581 -116675002 - AluY SINE Alu -15 296 1 5092 177 20 10 chr2 136581581 136582320 -116674263 - L1P5 LINE L1 -1279 4872 4142 746 265 0 0 chr2 136582562 136582724 -116673859 - AluJb SINE Alu -4 308 147 466 212 61 0 chr2 136583074 136583173 -116673410 + Tigger4(Zombi) DNA MER2_type 1 105 -2626 1446 136 4 36 chr2 136583236 136583487 -116673096 + Tigger4(Zombi) DNA MER2_type 2480 2722 -9 2364 80 0 3 chr2 136583571 136583872 -116672711 + AluY SINE Alu 1 300 -11 1318 257 60 29 chr2 136584093 136584312 -116672271 - L1ME LINE L1 -445 5719 5508 2322 96 0 0 chr2 136584312 136584605 -116671978 - AluSq SINE Alu -20 293 1 1318 257 60 29 chr2 136584605 136584832 -116671751 - L1ME LINE L1 -656 5508 5259 482 259 14 22 chr2 136584836 136584975 -116671608 - L1ME LINE L1 -5659 411 274 811 247 125 21 chr2 136584988 136585275 -116671308 - MER2 DNA MER2_type -28 317 1 711 233 28 46 chr2 136585275 136585548 -116671035 - L1ME LINE L1 -2404 3742 3479 836 154 0 34 chr2 136585563 136585712 -116670871 + AluJ SINE Alu 2 145 -167 189 0 0 0 chr2 136585719 136585740 -116670843 + (TG)n Simple_repeat Simple_repeat 2 22 0 689 262 62 20 chr2 136585778 136586083 -116670500 - L1ME LINE L1 -2686 3460 3143 802 221 65 5 chr2 136586092 136586291 -116670292 - MER34 LTR ERV1 -11 531 321 750 193 0 0 chr2 136586300 136586435 -116670148 + AluJo SINE Alu 2 136 -176 258 259 80 27 chr2 136586474 136586586 -116669997 - MER34 LTR ERV1 -273 269 152 180 179 0 0 chr2 136586586 136586625 -116669958 + CT-rich Low_complexity Low_complexity 3 41 0 208 26 0 77 chr2 136586861 136586900 -116669683 + (CCCCCA)n Simple_repeat Simple_repeat 6 41 0 411 255 21 21 chr2 136587077 136587222 -116669361 - MIR SINE MIR -56 206 62 584 288 100 39 chr2 136588642 136589254 -116667329 - L1MC5 LINE L1 -39 7922 7274 3889 111 7 88 chr2 136589492 136590215 -116666368 + MER4A LTR ERV1 1 664 0 696 292 68 8 chr2 136590963 136591213 -116665370 - L2 LINE L2 -2313 1001 737 393 222 0 22 chr2 136591601 136591691 -116664892 - L1ME1 LINE L1 -5 6161 6074 1024 128 0 12 chr2 136591810 136591974 -116664609 - AluSg/x SINE Alu -4 308 147 2169 92 13 0 chr2 136592273 136592578 -116664005 + L1PA10 LINE L1 5860 6168 0 762 224 0 0 chr2 136592833 136592980 -116663603 + AluJo SINE Alu 136 282 -30 2219 78 7 0 chr2 136592983 136593279 -116663304 - AluSc SINE Alu -11 298 1 31 26 0 0 chr2 136593279 136593317 -116663266 + AT_rich Low_complexity Low_complexity 1 38 0 2399 212 131 8 chr2 136593508 136594098 -116662485 - MER21B LTR ERV1 -2 861 200 262 259 60 5 chr2 136594345 136594470 -116662113 - MER5A DNA MER1_type -2 187 3 231 103 0 0 chr2 136594905 136594944 -116661639 + (CA)n Simple_repeat Simple_repeat 2 40 0 609 194 11 11 chr2 136595368 136595624 -116660959 + ACRO1 Satellite acromeric 1 256 -38 1168 142 2 0 chr2 136595956 136597072 -116659511 + ACRO1 Satellite acromeric 1 1118 -55 895 186 33 117 chr2 136597757 136598091 -116658492 - L1MB8 LINE L1 -33 6145 5840 381 58 0 0 chr2 136598155 136598207 -116658376 + (TTCC)n Simple_repeat Simple_repeat 4 55 0 298 218 0 0 chr2 136598508 136598563 -116658020 - Tigger5 DNA MER2_type -2268 55 1 1869 103 65 0 chr2 136598941 136599231 -116657352 + L1PA10 LINE L1 5860 6168 0 1204 198 100 7 chr2 136599417 136599879 -116656704 - MER21B LTR ERV1 -133 730 199 310 265 29 0 chr2 136600125 136600193 -116656390 - MER5A DNA MER1_type -2 187 118 207 0 0 0 chr2 136600621 136600644 -116655939 + (TCTG)n Simple_repeat Simple_repeat 2 24 0 260 53 26 0 chr2 136600686 136600724 -116655859 + (CA)n Simple_repeat Simple_repeat 1 39 0 595 197 11 11 chr2 136601146 136601402 -116655181 + ACRO1 Satellite acromeric 1 256 -38 738 177 0 0 chr2 136601734 136601952 -116654631 + ACRO1 Satellite acromeric 1 218 -2 210 71 0 0 chr2 136602346 136602374 -116654209 + (TCCCC)n Simple_repeat Simple_repeat 5 32 0 212 182 0 23 chr2 136603157 136603201 -116653382 + CT-rich Low_complexity Low_complexity 3 45 0 186 156 0 0 chr2 136605406 136605451 -116651132 + T-rich Low_complexity Low_complexity 1 45 0 1081 116 233 78 chr2 136605454 136605712 -116650871 - AluSg SINE Alu 0 300 3 324 188 0 0 chr2 136605758 136605827 -116650756 + (CATA)n Simple_repeat Simple_repeat 2 70 0 200 241 0 35 chr2 136605961 136606019 -116650564 + CT-rich Low_complexity Low_complexity 3 58 0 259 102 271 0 chr2 136606024 136606083 -116650500 - FLAM_A SINE Alu -38 95 21 * 332 272 0 11 chr2 136606055 136606147 -116650436 + AluJb SINE Alu 167 257 -45 285 98 0 0 chr2 136606149 136606190 -116650393 + (GGGTG)n Simple_repeat Simple_repeat 3 43 0 501 17 0 0 chr2 136606316 136606374 -116650209 + (TTCC)n Simple_repeat Simple_repeat 3 60 0 703 184 8 139 chr2 136606407 136606541 -116650042 - AluJb SINE Alu -81 231 148 225 119 0 0 chr2 136606541 136606583 -116650000 + (TATG)n Simple_repeat Simple_repeat 4 45 0 703 184 8 139 chr2 136606583 136606714 -116649869 - AluJb SINE Alu -164 148 1 338 253 50 10 chr2 136606851 136606950 -116649633 - FLAM_C SINE Alu -26 107 5 863 104 0 8 chr2 136607035 136607169 -116649414 + (TTTC)n Simple_repeat Simple_repeat 1 133 0 1358 145 0 5 chr2 136607169 136607383 -116649200 - AluSp SINE Alu -32 281 69 589 25 12 12 chr2 136607414 136607494 -116649089 + (TTTTC)n Simple_repeat Simple_repeat 1 80 0 270 240 50 40 chr2 136608231 136608331 -116648252 + MER89 LTR ERV1 323 423 -136 297 0 0 0 chr2 136608489 136608522 -116648061 + (CA)n Simple_repeat Simple_repeat 2 34 0 1574 183 0 0 chr2 136608650 136608934 -116647649 + AluSx SINE Alu 1 284 -28 487 197 71 31 chr2 136608954 136609081 -116647502 + AluJb SINE Alu 130 261 -51 1227 66 6 11 chr2 136609114 136609172 -116647411 + (TTTC)n Simple_repeat Simple_repeat 1 237 0 1227 66 6 11 chr2 136609172 136609353 -116647230 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 271 196 0 0 chr2 136609371 136609422 -116647161 + CT-rich Low_complexity Low_complexity 4 54 0 321 193 0 0 chr2 136609422 136609479 -116647104 - AluJ/FLAM SINE Alu -242 60 4 705 213 141 61 chr2 136609547 136609702 -116646881 - AluJo SINE Alu -16 286 145 2058 105 7 0 chr2 136609702 136610006 -116646577 - AluSp SINE Alu -7 306 1 705 213 141 61 chr2 136610006 136610113 -116646470 - AluJo SINE Alu -157 145 3 214 85 43 64 chr2 136610163 136610210 -116646373 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 205 224 15 45 chr2 136610580 136610647 -116645936 + G-rich Low_complexity Low_complexity 3 67 0 919 233 6 46 chr2 136610700 136610979 -116645604 + L1PA13 LINE L1 5888 6153 -10 1642 134 44 13 chr2 136611116 136611414 -116645169 - AluSx SINE Alu 0 312 6 349 68 0 0 chr2 136611508 136611552 -116645031 + AluSp/q SINE Alu 240 283 -20 279 0 0 0 chr2 136611569 136611600 -116644983 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1506 127 0 16 chr2 136611674 136611952 -116644631 + AluSg SINE Alu 60 310 0 545 192 4 0 chr2 136612038 136612316 -116644267 + CT-rich Low_complexity Low_complexity 1 279 0 642 184 0 0 chr2 136612350 136612524 -116644059 + CT-rich Low_complexity Low_complexity 1 174 0 591 196 0 0 chr2 136612546 136612709 -116643874 + CT-rich Low_complexity Low_complexity 1 163 0 300 242 188 38 chr2 136612709 136612895 -116643688 - L1M4c LINE L1 -5078 1306 1093 642 160 7 27 chr2 136612896 136613199 -116643384 + (TCTCTG)n Simple_repeat Simple_repeat 1 296 0 432 181 18 12 chr2 136613172 136613338 -116643245 + (TCTG)n Simple_repeat Simple_repeat 2 168 0 * 312 222 0 0 chr2 136613340 136613448 -116643135 + CT-rich Low_complexity Low_complexity 2 109 0 422 191 0 45 chr2 136616756 136616866 -116639717 + MER45C DNA AcHobo 485 589 -364 1264 229 80 36 chr2 136618936 136619377 -116637206 + L1MD2 LINE L1 5890 6349 -10 325 258 92 33 chr2 136619868 136619988 -116636595 + MIR3 SINE MIR 67 193 -15 1057 162 2 0 chr2 136620100 136621998 -116634585 + ALR/Alpha Satellite centromeric 1 1901 -8 1172 167 5 2 chr2 136622010 136643300 -116613283 + ALR/Alpha Satellite centromeric 1 21353 -8 1042 164 4 4 chr2 136643433 136644499 -116612084 + ALR/Alpha Satellite centromeric 1 1066 -1897 2587 39 7 3 chr2 136644499 136644809 -116611774 - AluY SINE Alu 0 311 1 1042 164 4 4 chr2 136644809 136646369 -116610214 + ALR/Alpha Satellite centromeric 1066 2935 -28 311 260 0 0 chr2 136646477 136646554 -116610029 - L1ME3 LINE L1 -68 6094 6018 673 99 10 0 chr2 136647864 136647965 -116608618 + AluY SINE Alu 210 311 0 325 289 118 58 chr2 136647995 136648558 -116608025 - L1MC4 LINE L1 -74 7968 7274 817 177 0 8 chr2 136648719 136648849 -116607734 + FLAM_C SINE Alu 1 129 -14 2214 108 0 3 chr2 136649004 136649300 -116607283 + AluSc SINE Alu 5 299 -10 3791 202 33 44 chr2 136649490 136650520 -116606063 - L1MD1 LINE L1 -8 6234 5218 228 148 33 16 chr2 136650530 136650591 -116605992 + LTR37A LTR ERV1 365 426 0 3298 241 45 11 chr2 136650873 136651681 -116604902 - Cheshire DNA MER1_type -1494 926 84 1535 169 94 4 chr2 136651681 136651948 -116604635 + AluJb SINE Alu 1 291 -21 3298 241 45 11 chr2 136651948 136652035 -116604548 - Cheshire DNA MER1_type -2336 84 1 2056 231 74 24 chr2 136652065 136653072 -116603511 + L1ME2 LINE L1 4565 5616 -550 2074 136 21 0 chr2 136653147 136653434 -116603149 + AluSc SINE Alu 1 293 -16 679 153 51 0 chr2 136653737 136653855 -116602728 - FAM SINE Alu -41 144 21 915 205 101 0 chr2 136653954 136654222 -116602361 + L1ME2 LINE L1 5584 5878 -286 * 1883 139 19 25 chr2 136654212 136654511 -116602072 + L1MB2 LINE L1 5547 5846 -325 2186 104 0 13 chr2 136654511 136654818 -116601765 + AluY SINE Alu 1 303 -8 1883 139 19 25 chr2 136654818 136655080 -116601503 + L1MB2 LINE L1 5846 6170 -1 1333 247 82 15 chr2 136655148 136655602 -116600981 - LTR40a LTR ERVL -2 517 34 645 184 59 0 chr2 136655780 136655932 -116600651 + MER63 DNA MER1_type 2 162 -899 813 208 81 21 chr2 136655935 136656219 -116600364 + L1ME2 LINE L1 5854 6154 -10 547 279 44 4 chr2 136656382 136656608 -116599975 - L1MD1 LINE L1 -1214 4932 4698 1755 112 88 0 chr2 136656640 136656900 -116599683 - AluSg SINE Alu -2 308 26 883 248 108 52 chr2 136657663 136658070 -116598513 + MLT1H LTR MaLR 110 539 -10 310 355 9 0 chr2 136658075 136658182 -116598401 - L1MD1 LINE L1 -2326 3820 3713 301 341 53 19 chr2 136658565 136658943 -116597640 - L1MC/D LINE L1 -2004 5804 5414 1828 144 9 47 chr2 136659092 136659411 -116597172 + AluJo SINE Alu 1 307 -5 355 193 0 34 chr2 136659979 136660067 -116596516 - MLT1I LTR MaLR -6 403 319 603 229 63 20 chr2 136660136 136660340 -116596243 - MLT1J2 LTR MaLR -189 220 1 1222 249 34 0 chr2 136662665 136662930 -116593653 + AluJb SINE Alu 1 274 -38 247 118 0 0 chr2 136663250 136663284 -116593299 - MER91 DNA MER1_type -161 35 2 567 229 19 71 chr2 136663805 136664072 -116592511 + MER112 DNA MER1_type 1 253 -3 445 220 73 9 chr2 136664146 136664255 -116592328 + MIR SINE MIR 18 133 -129 521 83 0 0 chr2 136664258 136664330 -116592253 + THE1B LTR MaLR 1 72 -292 4060 103 8 5 chr2 136664347 136664940 -116591643 + THE1B-int LTR MaLR 984 1578 -2 2239 115 29 64 chr2 136664942 136665129 -116591454 + THE1B LTR MaLR 1 170 -194 1974 131 14 3 chr2 136665129 136665412 -116591171 + AluSc SINE Alu 5 290 -19 2239 115 29 64 chr2 136665412 136665599 -116590984 + THE1B LTR MaLR 170 362 -2 2390 137 3 11 chr2 136665633 136665999 -116590584 - THE1B LTR MaLR 0 364 2 907 227 12 32 chr2 136666775 136667026 -116589557 - MLT1A2 LTR MaLR -1 373 128 645 272 38 32 chr2 136667277 136667623 -116588960 + L1MC4 LINE L1 7694 8041 -1 561 238 65 50 chr2 136668295 136668677 -116587906 + L1MC5 LINE L1 7273 7660 -301 567 307 16 11 chr2 136668774 136668963 -116587620 + MLT1H LTR MaLR 84 273 -276 323 249 53 95 chr2 136669269 136669438 -116587145 + L1MC5 LINE L1 7768 7929 -32 1381 232 15 46 chr2 136669452 136669862 -116586721 + MLT2C1 LTR ERVL 1 397 0 475 243 72 0 chr2 136669959 136670070 -116586513 - MER5C DNA MER1_type -203 121 3 2245 112 3 3 chr2 136670677 136670989 -116585594 + AluSx SINE Alu 1 312 0 1020 325 43 19 chr2 136671393 136671809 -116584774 + LTR33 LTR ERVL 94 519 -2 768 217 181 22 chr2 136671939 136672215 -116584368 - MER5C DNA MER1_type -1 323 4 239 71 24 0 chr2 136672461 136672503 -116584080 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 779 252 157 37 chr2 136672795 136673228 -116583355 - LTR33 LTR ERVL 0 521 37 2281 51 41 54 chr2 136673670 136673985 -116582598 - AluY SINE Alu 0 311 1 5529 36 18 0 chr2 136675331 136676003 -116580580 + L1PA4 LINE L1 5469 6152 -3 1567 134 27 101 chr2 136676709 136677045 -116579538 + AluYb8 SINE Alu 1 311 -7 479 271 79 0 chr2 136878439 136878579 -116378004 + MIR SINE MIR 41 191 -71 1410 64 0 0 chr2 136878589 136878761 -116377822 + AluY SINE Alu 131 302 -9 219 69 0 0 chr2 136879576 136879605 -116376978 + (CA)n Simple_repeat Simple_repeat 2 30 0 828 218 39 24 chr2 136880963 136881169 -116375414 - MER3 DNA MER1_type 0 209 1 1587 131 9 99 chr2 136881664 136882008 -116374575 - L1MB8 LINE L1 -21 6157 5845 296 304 9 0 chr2 136882865 136882977 -116373606 + (TG)n Simple_repeat Simple_repeat 2 114 0 1414 113 18 106 chr2 136884710 136884985 -116371598 + MER2 DNA MER2_type 1 251 -94 238 289 78 0 chr2 136885258 136885348 -116371235 - L1MB8 LINE L1 -462 5659 5563 25 31 0 0 chr2 136885358 136885390 -116371193 + AT_rich Low_complexity Low_complexity 1 32 0 17447 33 4 1 chr2 136886788 136889610 -116366973 - L1PA4 LINE L1 -2 6153 3324 2319 101 0 0 chr2 136889760 136890056 -116366527 - AluY SINE Alu -15 296 1 2373 110 3 0 chr2 136890310 136890620 -116365963 - AluSq SINE Alu -2 311 1 222 286 62 56 chr2 136891089 136891267 -116365316 + L2 LINE L2 2304 2482 -832 200 340 19 28 chr2 136891355 136891461 -116365122 - L2 LINE L2 -2 3270 3166 1246 69 0 0 chr2 136891789 136891949 -116364634 - L1PA4 LINE L1 -3 6152 5993 1361 96 21 11 chr2 136892379 136892566 -116364017 - AluSq SINE Alu -124 189 1 1110 140 90 0 chr2 136893038 136893216 -116363367 + AluSx SINE Alu 1 194 -118 1360 133 177 4 chr2 136893238 136893464 -116363119 - AluSx SINE Alu -47 265 1 23 54 0 0 chr2 136893524 136893561 -116363022 + AT_rich Low_complexity Low_complexity 1 37 0 228 178 135 0 chr2 136893620 136893673 -116362910 - MIR SINE MIR -112 96 38 2402 78 0 13 chr2 136893875 136894182 -116362401 - AluSc SINE Alu -6 303 1 405 333 75 0 chr2 136894506 136894653 -116361930 - L2 LINE L2 -2 3270 3113 21 0 0 0 chr2 136897030 136897051 -116359532 + AT_rich Low_complexity Low_complexity 1 21 0 1829 215 11 11 chr2 136897770 136898216 -116358367 + L1M4 LINE L1 4759 5204 -942 884 155 18 36 chr2 136898217 136898385 -116358198 + FRAM SINE Alu 1 165 -1 9218 139 28 30 chr2 136898419 136898701 -116357882 + Tigger1 DNA MER2_type 13 294 -2124 1775 175 14 0 chr2 136898701 136898993 -116357590 - AluJo SINE Alu -16 296 1 9218 139 28 30 chr2 136898993 136899570 -116357013 + Tigger1 DNA MER2_type 294 871 -1547 1871 104 10 97 chr2 136899570 136899704 -116356879 + AluSg SINE Alu 1 145 -159 2118 118 0 30 chr2 136899704 136900001 -116356582 + AluSx SINE Alu 1 288 -24 1871 104 10 97 chr2 136900001 136900197 -116356386 + AluSg SINE Alu 145 304 0 9218 139 28 30 chr2 136900197 136900916 -116355667 + Tigger1 DNA MER2_type 871 1590 -828 2372 75 3 3 chr2 136900918 136901211 -116355372 + AluSp SINE Alu 2 294 -19 1934 154 78 0 chr2 136901216 136901573 -116355010 + L1MA9 LINE L1 5728 6112 -200 2035 84 4 33 chr2 136901573 136901847 -116354736 + AluY SINE Alu 28 293 -18 1345 43 0 25 chr2 136901851 136902014 -116354569 + AluY SINE Alu 1 159 -152 374 56 0 19 chr2 136902014 136902068 -116354515 + (TA)n Simple_repeat Simple_repeat 1 53 0 713 91 0 66 chr2 136902069 136902190 -116354393 + L1MA9 LINE L1 6105 6217 -95 685 169 17 0 chr2 136902205 136902323 -116354260 - Tigger1 DNA MER2_type 0 2418 2299 635 217 0 86 chr2 136902329 136902504 -116354079 + FRAM SINE Alu 4 163 -13 436 147 0 39 chr2 136902507 136902609 -116353974 - Tigger1 DNA MER2_type -111 2307 2210 2322 78 0 7 chr2 136902614 136902933 -116353650 + AluY SINE Alu 1 311 0 324 26 0 0 chr2 136902938 136902976 -116353607 + L1M LINE L1 5360 5397 -771 1842 146 38 7 chr2 136902976 136903263 -116353320 + AluSx SINE Alu 1 296 -16 1246 123 54 1 chr2 136903284 136903500 -116353083 + L1M2 LINE L1 5356 5585 -547 12493 120 44 44 chr2 136903501 136904719 -116351864 - Tigger1 DNA MER2_type -221 2197 980 2031 119 10 17 chr2 136904719 136905013 -116351570 + AluSc SINE Alu 1 292 -17 12493 120 44 44 chr2 136905013 136905394 -116351189 - Tigger1 DNA MER2_type -1438 980 600 1787 185 10 0 chr2 136905394 136905686 -116350897 + AluJo SINE Alu 1 295 -17 12493 120 44 44 chr2 136905686 136906181 -116350402 - Tigger1 DNA MER2_type -1818 600 103 3592 53 8 26 chr2 136906183 136906264 -116350319 + L1PA8 LINE L1 5706 5787 -385 2216 85 32 0 chr2 136906264 136906546 -116350037 + AluSx SINE Alu 2 292 -20 3592 53 8 26 chr2 136906546 136906932 -116349651 + L1PA8 LINE L1 5787 6165 -7 25 0 0 0 chr2 136906935 136906960 -116349623 + AT_rich Low_complexity Low_complexity 1 25 0 389 188 182 41 chr2 136906978 136907148 -116349435 + Charlie5 DNA MER1_type 2350 2543 -69 325 256 25 74 chr2 136907150 136907271 -116349312 - Tigger1 DNA MER2_type -2303 115 1 256 108 0 0 chr2 136907278 136907315 -116349268 + L1MA9 LINE L1 6272 6308 -4 929 236 56 23 chr2 136907323 136907775 -116348808 + L1M4c LINE L1 1648 2207 -4177 1098 83 0 0 chr2 136907802 136907934 -116348649 + AluY SINE Alu 1 132 -179 1001 168 75 125 chr2 136907939 136907950 -116348633 + L1M4c LINE L1 2277 2287 -4095 2063 117 0 3 chr2 136907950 136908271 -116348312 + AluSg SINE Alu 1 320 0 1001 168 75 125 chr2 136908271 136908411 -116348172 + L1M4c LINE L1 2287 2432 -3950 2057 129 3 0 chr2 136908411 136908705 -116347878 - AluSg SINE Alu -15 295 1 1001 168 75 125 chr2 136908705 136908739 -116347844 + L1M4c LINE L1 2432 2466 -3916 1967 143 0 10 chr2 136908739 136909033 -116347550 + AluSx SINE Alu 10 300 -12 1001 168 75 125 chr2 136909033 136909156 -116347427 + L1M4c LINE L1 2466 2594 -3788 2361 94 0 0 chr2 136909156 136909454 -116347129 + AluSx SINE Alu 1 298 -14 1001 168 75 125 chr2 136909454 136909696 -116346887 + L1M4c LINE L1 2594 2824 -3558 * 9909 200 59 31 chr2 136909691 136910447 -116346136 + L1MB4 LINE L1 2315 3049 -3131 2359 62 21 0 chr2 136910447 136910735 -116345848 + AluY SINE Alu 1 294 -17 9909 200 59 31 chr2 136910735 136912227 -116344356 + L1MB4 LINE L1 3049 4499 -1681 2518 75 0 10 chr2 136912227 136912535 -116344048 + AluY SINE Alu 1 305 -6 9909 200 59 31 chr2 136912535 136913558 -116343025 + L1MB4 LINE L1 4499 5493 -687 888 161 0 0 chr2 136913558 136913688 -116342895 + FLAM_A SINE Alu 4 133 0 9909 200 59 31 chr2 136913688 136913703 -116342880 + L1MB4 LINE L1 5493 5506 -674 2487 78 7 0 chr2 136913703 136914012 -116342571 + AluSp SINE Alu 1 311 -2 9909 200 59 31 chr2 136914012 136914449 -116342134 + L1MB4 LINE L1 5506 6140 -40 1306 271 74 65 chr2 136914498 136915403 -116341180 + L1M4c LINE L1 2810 3722 -2660 1324 169 4 21 chr2 136915424 136915667 -116340916 - AluJo SINE Alu -35 277 39 502 166 20 24 chr2 136915686 136915793 -116340790 - MLT1D LTR MaLR 0 505 413 505 269 101 10 chr2 136915942 136916150 -116340433 - L1ME LINE L1 -336 5785 5559 184 317 75 25 chr2 136917885 136918005 -116338578 - MIR SINE MIR -29 233 108 264 118 0 79 chr2 136918276 136918352 -116338231 + (CACG)n Simple_repeat Simple_repeat 3 72 0 210 235 20 0 chr2 136919910 136919961 -116336622 + GA-rich Low_complexity Low_complexity 2 53 0 296 218 293 0 chr2 136919973 136920106 -116336477 - MER5A DNA MER1_type 0 189 18 186 239 123 87 chr2 136920157 136920295 -116336288 - MIR SINE MIR -92 170 28 2313 94 16 3 chr2 136921030 136921337 -116335246 - AluY SINE Alu 0 311 1 368 262 19 19 chr2 136923310 136923413 -116333170 + MLT1J2 LTR MaLR 281 383 -67 2277 100 0 0 chr2 136923414 136923739 -116332844 + AluY SINE Alu 1 311 0 301 323 139 6 chr2 136923933 136924091 -116332492 + MIR SINE MIR 72 250 -12 2598 57 0 0 chr2 136926212 136926509 -116330074 - AluY SINE Alu -14 297 1 2347 92 3 0 chr2 136927831 136928125 -116328458 - AluY SINE Alu -16 295 1 1759 151 43 23 chr2 136928391 136928696 -116327887 + AluSx SINE Alu 1 311 -1 330 184 303 9 chr2 136928826 136928935 -116327648 - MIR SINE MIR -113 149 9 258 167 33 17 chr2 136930443 136930503 -116326080 + L1ME LINE L1 5531 5591 -530 565 254 28 11 chr2 136930509 136930690 -116325893 + L1MC5 LINE L1 7724 7907 -54 2297 125 17 3 chr2 136930759 136931119 -116325464 - MER47A DNA MER2_type -1 365 1 1887 109 58 3 chr2 136931170 136931463 -116325120 + AluSq SINE Alu 1 309 -4 300 293 121 13 chr2 136931465 136931622 -116324961 + L1ME LINE L1 5647 5820 -301 2905 180 74 5 chr2 136931730 136932296 -116324287 + MER6A DNA MER2_type 1 605 0 2374 66 0 3 chr2 136932365 136932666 -116323917 - AluY SINE Alu -9 302 3 438 259 147 21 chr2 136934074 136934217 -116322366 + MIR3 SINE MIR 3 163 -45 5409 228 89 41 chr2 136934613 136936250 -116320333 + L1MD2 LINE L1 9 1723 -4817 571 283 85 20 chr2 136936227 136936581 -116320002 + L1MD2 LINE L1 3482 3858 -2682 * 716 192 26 7 chr2 136936613 136936764 -116319819 + MLT1B LTR MaLR 191 344 -46 2437 55 0 6 chr2 136936779 136937090 -116319493 + AluY SINE Alu 1 309 -2 1924 198 24 18 chr2 136937095 136937550 -116319033 + L1MD2 LINE L1 3869 4326 -2214 1079 138 113 39 chr2 136937550 136937781 -116318802 + AluJo SINE Alu 35 282 -30 278 206 14 0 chr2 136937793 136937866 -116318717 + GA-rich Low_complexity Low_complexity 1 74 0 350 226 49 0 chr2 136937895 136937997 -116318586 + L1MD2 LINE L1 4330 4436 -2104 2174 245 43 42 chr2 136938096 136938118 -116318465 + L1MD2 LINE L1 4426 4446 -2094 2099 71 10 34 chr2 136938118 136938415 -116318168 + AluY SINE Alu 1 290 -21 2174 245 43 42 chr2 136938415 136938659 -116317924 + L1MD2 LINE L1 4446 4688 -1852 1991 109 20 3 chr2 136938659 136938953 -116317630 + AluSq SINE Alu 1 299 -14 2174 245 43 42 chr2 136938953 136939493 -116317090 + L1MD2 LINE L1 4688 5234 -1306 429 205 42 42 chr2 136939520 136939686 -116316897 + L1MD2 LINE L1 5369 5534 -1006 964 114 0 0 chr2 136939694 136939826 -116316757 + AluSp/q SINE Alu 156 287 -26 2388 61 0 0 chr2 136939827 136940124 -116316459 + AluY SINE Alu 1 297 -14 1127 191 113 38 chr2 136940124 136940443 -116316140 + L1MD2 LINE L1 6196 6538 -215 289 255 38 0 chr2 136940475 136940581 -116316002 + L1MD3 LINE L1 7885 7994 -1 1370 183 39 7 chr2 136941426 136941711 -116314872 + AluJo SINE Alu 1 294 -18 2092 100 10 0 chr2 136941895 136942184 -116314399 + AluSg SINE Alu 1 292 -18 1553 150 20 33 chr2 136942937 136943237 -116313346 + AluJb SINE Alu 1 296 -16 241 258 34 45 chr2 136943351 136943440 -116313143 + MER5B DNA MER1_type 1 88 -90 22 80 0 0 chr2 136943453 136943503 -116313080 + AT_rich Low_complexity Low_complexity 1 50 0 279 333 58 29 chr2 136943641 136943682 -116312901 - L1ME LINE L1 -375 5746 5708 1887 163 0 0 chr2 136943682 136943988 -116312595 + AluJb SINE Alu 1 306 -6 279 333 58 29 chr2 136943988 136944153 -116312430 - L1ME LINE L1 -413 5708 5534 1883 123 7 0 chr2 136944238 136944515 -116312068 + AluSq SINE Alu 16 294 -19 2375 90 0 0 chr2 136944673 136944983 -116311600 - AluSx SINE Alu -2 310 1 348 277 163 21 chr2 136945151 136945292 -116311291 - HAL1b LINE L1 -1087 261 101 276 227 337 18 chr2 136945443 136945606 -116310977 - L2 LINE L2 -66 3247 3033 2040 223 22 11 chr2 136946452 136946905 -116309678 + MLT1C LTR MaLR 1 458 -9 1609 100 4 9 chr2 136947549 136947780 -116308803 - AluSg1 SINE Alu -79 230 1 1032 180 12 0 chr2 136948295 136948467 -116308116 - FAM SINE Alu -1 174 1 2089 100 10 3 chr2 136948942 136949242 -116307341 + AluSx SINE Alu 1 302 -10 1674 185 13 0 chr2 136949881 136950179 -116306404 + AluJb SINE Alu 1 302 -10 1820 123 0 79 chr2 136950179 136950496 -116306087 + AluSg SINE Alu 1 293 -17 209 333 71 77 chr2 136950908 136951091 -116305492 - L2 LINE L2 -19 3253 3072 389 250 135 26 chr2 136951355 136951511 -116305072 + MIR SINE MIR 34 206 -56 1888 61 61 68 chr2 136951811 136952129 -116304454 + AluSp SINE Alu 1 313 0 2058 98 30 0 chr2 136952479 136952776 -116303807 + AluSp SINE Alu 1 306 -7 773 54 0 0 chr2 136953669 136953761 -116302822 + AluSq/x SINE Alu 44 135 -178 2235 101 7 0 chr2 136953761 136954068 -116302515 + AluSg SINE Alu 1 309 -1 397 300 35 64 chr2 136954322 136954497 -116302086 + L1ME LINE L1 5536 5709 -461 2072 108 0 7 chr2 136954758 136955054 -116301529 - AluSx SINE Alu -18 294 1 2528 54 0 10 chr2 136955128 136955442 -116301141 - AluY SINE Alu 0 311 1 407 279 65 19 chr2 136956100 136956254 -116300329 - L2 LINE L2 -2 3311 3151 1412 128 120 4 chr2 136956623 136956857 -116299726 - AluSg SINE Alu -49 261 1 1846 130 25 0 chr2 136956898 136957182 -116299401 - AluSx SINE Alu -21 291 1 1392 155 114 75 chr2 136957291 136957652 -116298931 + THE1C LTR MaLR 1 375 0 250 267 35 12 chr2 136958060 136958146 -116298437 + L1MC5 LINE L1 6695 6782 -1179 2279 95 0 3 chr2 136958377 136958683 -116297900 + AluSc SINE Alu 5 309 0 2355 132 25 3 chr2 136958695 136959051 -116297532 + THE1B LTR MaLR 1 364 0 2847 108 11 1 chr2 136959051 136959603 -116296980 + THE1B-int LTR MaLR 1 597 -983 2020 48 4 0 chr2 136959614 136959864 -116296719 + AluY SINE Alu 13 263 -48 547 251 264 46 chr2 136959864 136960538 -116296045 + HAL1 LINE L1 48 868 -1639 1300 127 43 130 chr2 136960545 136960675 -116295908 - MER21B LTR ERV1 -19 844 753 1487 164 46 0 chr2 136960675 136960938 -116295645 + AluJb SINE Alu 23 297 -15 1300 127 43 130 chr2 136960938 136961107 -116295476 - MER21B LTR ERV1 -110 753 571 1235 153 109 12 chr2 136961314 136961562 -116295021 + LTR23 LTR ERV1 161 432 -5 2552 197 81 26 chr2 136961564 136962106 -116294477 - MER21B LTR ERV1 -291 572 1 369 240 48 72 chr2 136962106 136962231 -116294352 + HAL1 LINE L1 851 972 -1535 2214 109 0 0 chr2 136962235 136962548 -116294035 + AluSq SINE Alu 1 313 0 929 236 137 38 chr2 136962555 136962720 -116293863 + HAL1 LINE L1 1060 1207 -1300 2049 119 0 3 chr2 136962720 136963014 -116293569 + AluSx SINE Alu 1 293 -19 929 236 137 38 chr2 136963014 136963353 -116293230 + HAL1 LINE L1 1207 1614 -893 1348 189 18 18 chr2 136963353 136963634 -116292949 + AluJo SINE Alu 1 281 -31 251 217 80 109 chr2 136963646 136963784 -116292799 + HAL1 LINE L1 1814 1947 -560 441 275 107 90 chr2 136963823 136963899 -116292684 + HAL1 LINE L1 2259 2332 -175 2178 95 0 3 chr2 136963899 136964193 -116292390 - AluY SINE Alu -18 293 1 441 275 107 90 chr2 136964193 136964311 -116292272 + HAL1 LINE L1 2332 2460 -47 2048 123 0 3 chr2 136964311 136964619 -116291964 - AluSq SINE Alu -6 307 1 441 275 107 90 chr2 136964619 136964667 -116291916 + HAL1 LINE L1 2460 2506 -1 859 134 0 15 chr2 136964841 136964975 -116291608 - AluJb SINE Alu -180 132 1 272 341 57 0 chr2 136965083 136965206 -116291377 + MIR SINE MIR 127 256 -6 1253 106 156 0 chr2 136965293 136965492 -116291091 - MER30 DNA MER1_type 0 230 1 21 0 0 0 chr2 136965775 136965796 -116290787 + AT_rich Low_complexity Low_complexity 1 21 0 504 301 40 23 chr2 136965847 136966020 -116290563 + MIR SINE MIR 20 195 -67 2166 105 0 3 chr2 136966062 136966367 -116290216 + AluSq SINE Alu 1 304 -9 327 354 62 11 chr2 136967164 136967342 -116289241 - L2 LINE L2 -9 3263 3077 224 289 0 0 chr2 136967575 136967627 -116288956 + MIR SINE MIR 56 107 -101 23 33 0 0 chr2 136968743 136968773 -116287810 + GC_rich Low_complexity Low_complexity 1 30 0 29 0 0 0 chr2 136968881 136968910 -116287673 + AT_rich Low_complexity Low_complexity 1 29 0 1835 226 189 12 chr2 136968912 136969575 -116287008 + L1MC3 LINE L1 6710 7489 -296 506 155 223 0 chr2 136969610 136969758 -116286825 + L1MD3 LINE L1 7805 7985 -10 480 232 104 0 chr2 136969784 136969909 -116286674 + AluJo SINE Alu 122 259 -53 466 184 50 79 chr2 136969909 136970083 -116286500 + L1ME3 LINE L1 5976 6131 -31 775 142 15 22 chr2 136970084 136970218 -116286365 + AluJo/FLAM SINE Alu 1 133 -169 255 163 47 0 chr2 136970218 136970261 -116286322 + AluSq SINE Alu 133 177 -126 1338 70 16 0 chr2 136970263 136970449 -116286134 + AluY SINE Alu 116 304 -7 415 192 87 0 chr2 136970878 136970982 -116285601 + L1ME4a LINE L1 6007 6119 -2 1588 184 0 24 chr2 136970993 136971286 -116285297 + AluJb SINE Alu 1 286 -26 1986 111 7 7 chr2 136971295 136971583 -116285000 - AluSg SINE Alu -20 290 3 2254 99 0 6 chr2 136971693 136972006 -116284577 + AluSx SINE Alu 1 311 -1 647 158 100 0 chr2 136972326 136972446 -116284137 + AluJb SINE Alu 2 133 -179 2454 54 0 10 chr2 136972578 136972892 -116283691 - AluY SINE Alu 0 311 1 2281 93 3 0 chr2 136973204 136973514 -116283069 - AluSp SINE Alu -2 311 1 1986 117 0 3 chr2 136973905 136974226 -116282357 - AluSg SINE Alu 0 320 1 1225 193 6 94 chr2 136974226 136974416 -116282167 - AluSq SINE Alu -11 302 152 2343 70 0 0 chr2 136974416 136974714 -116281869 - AluY SINE Alu -13 298 1 1225 193 6 94 chr2 136974714 136974854 -116281729 - AluSq SINE Alu -161 152 1 354 130 0 130 chr2 136974854 136974931 -116281652 - AluJo SINE Alu -160 142 76 524 239 114 100 chr2 136974944 136975058 -116281525 + MER63 DNA MER1_type 770 881 -181 2356 60 3 3 chr2 136975058 136975360 -116281223 - AluY SINE Alu -9 302 1 524 239 114 100 chr2 136975360 136975384 -116281199 + MER63 DNA MER1_type 881 903 -159 2094 90 13 3 chr2 136975384 136975683 -116280900 - AluSg SINE Alu -7 303 2 524 239 114 100 chr2 136975683 136975832 -116280751 + MER63 DNA MER1_type 903 1062 0 647 242 54 100 chr2 136975832 136976004 -116280579 - L1ME LINE L1 -387 5777 5599 1540 134 0 8 chr2 136976004 136976251 -116280332 - AluSg/x SINE Alu 0 312 68 1281 177 7 84 chr2 136976254 136976410 -116280173 - AluJo SINE Alu -26 286 120 2028 112 3 13 chr2 136976410 136976714 -116279869 - AluSq SINE Alu -12 301 1 339 85 0 0 chr2 136976714 136976761 -116279822 + (TG)n Simple_repeat Simple_repeat 2 48 0 1281 177 7 84 chr2 136976761 136976913 -116279670 - AluJo SINE Alu -190 122 1 2011 100 7 0 chr2 136976915 136977225 -116279358 - AluSx SINE Alu 0 312 1 647 242 54 100 chr2 136977225 136977304 -116279279 - L1ME LINE L1 -568 5596 5530 1714 70 0 0 chr2 136977323 136977538 -116279045 - AluSc SINE Alu -24 285 71 2180 81 7 10 chr2 136977538 136977831 -116278752 - AluSc SINE Alu -15 294 1 1686 271 97 45 chr2 136977841 136978102 -116278481 - L1MC4a LINE L1 -1630 6178 5932 2357 69 13 0 chr2 136978102 136978407 -116278176 - AluSp SINE Alu -4 309 1 1686 271 97 45 chr2 136978407 136979025 -116277558 - L1MC4a LINE L1 -1876 5932 5254 2372 85 0 3 chr2 136979222 136979527 -116277056 - AluSg SINE Alu -2 308 5 1128 221 52 55 chr2 136979530 136979783 -116276800 + LTR24B LTR ERV1 131 384 -192 2331 91 10 3 chr2 136979783 136980081 -116276502 + AluSq SINE Alu 1 300 -13 1128 221 52 55 chr2 136980081 136980193 -116276390 + LTR24B LTR ERV1 384 495 -81 23 0 0 0 chr2 136980962 136980985 -116275598 + GC_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 136981196 136981219 -116275364 + AT_rich Low_complexity Low_complexity 1 23 0 2358 64 0 48 chr2 136981866 136982178 -116274405 - AluY SINE Alu -14 297 1 2237 93 33 3 chr2 136982350 136982652 -116273931 - AluSx SINE Alu -1 311 1 2183 118 6 16 chr2 136982659 136982974 -116273609 - AluSx SINE Alu 0 312 1 2138 107 0 7 chr2 136982998 136983289 -116273294 + AluY SINE Alu 3 291 -20 700 175 0 9 chr2 136983318 136983432 -116273151 - FLAM_C SINE Alu -20 123 11 2037 74 48 48 chr2 136983678 136983987 -116272596 - AluY SINE Alu -2 309 1 2207 95 11 3 chr2 136983989 136984274 -116272309 - AluSg SINE Alu -23 287 1 2087 68 78 30 chr2 136984279 136984575 -116272008 - AluY SINE Alu -1 310 1 2446 80 3 3 chr2 136984760 136985060 -116271523 + AluSp SINE Alu 1 300 -13 419 250 107 75 chr2 136985346 136985758 -116270825 - L1MC5 LINE L1 -210 7751 7327 2024 145 0 0 chr2 136985766 136986062 -116270521 - AluSx SINE Alu -16 296 1 668 179 41 0 chr2 136986143 136986288 -116270295 - L1M4 LINE L1 -437 5747 5597 2203 107 0 10 chr2 136986548 136986839 -116269744 - AluSx SINE Alu -24 288 1 2689 20 7 3 chr2 136986940 136987242 -116269341 - AluY SINE Alu -8 303 1 1088 187 79 5 chr2 136987413 136987616 -116268967 - AluJo SINE Alu -14 298 81 613 259 70 30 chr2 136988030 136988231 -116268352 - MER3 DNA MER1_type 0 209 1 198 252 24 150 chr2 136988575 136988702 -116267881 - L2 LINE L2 -28 3285 3175 654 182 118 0 chr2 136988735 136988845 -116267738 - FLAM_C SINE Alu -10 123 1 701 31 20 51 chr2 136988848 136988946 -116267637 - L1MC1 LINE L1 -5 6328 6234 1188 205 128 4 chr2 136989025 136989283 -116267300 + AluJb SINE Alu 15 304 -8 1647 171 0 35 chr2 136989531 136989817 -116266766 + AluJb SINE Alu 6 281 -31 2057 73 8 0 chr2 136989854 136990102 -116266481 + AluSc SINE Alu 29 278 -31 405 0 0 0 chr2 136990106 136990151 -116266432 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 395 246 112 72 chr2 136990184 136990460 -116266123 - L1ME4a LINE L1 -101 6020 5734 2151 118 0 20 chr2 136990477 136990636 -116265947 - AluSx SINE Alu -22 290 129 240 59 0 0 chr2 136990636 136990670 -116265913 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2141 121 0 0 chr2 136990670 136990952 -116265631 - AluSc SINE Alu -27 282 1 2151 118 0 20 chr2 136990952 136991087 -116265496 - AluSx SINE Alu -181 131 1 304 247 77 53 chr2 136991528 136991698 -116264885 - MLT1K LTR MaLR -30 558 385 724 324 120 23 chr2 136992087 136992696 -116263887 + L1MEd LINE L1 12 679 -5440 2365 75 7 10 chr2 136993056 136993348 -116263235 + AluY SINE Alu 1 291 -20 1737 128 83 0 chr2 136993392 136993657 -116262926 - AluSx SINE Alu -12 300 14 437 131 0 0 chr2 136993694 136993755 -116262828 + AluSc SINE Alu 234 294 -15 346 271 79 30 chr2 136993789 136993894 -116262689 - L1MEc LINE L1 -4579 2559 2461 2278 108 0 0 chr2 136993894 136994191 -116262392 - AluSq SINE Alu -16 297 1 346 271 79 30 chr2 136994191 136994288 -116262295 - L1MEc LINE L1 -4677 2461 2347 831 223 114 67 chr2 136994295 136994533 -116262050 - MLT1C LTR MaLR -8 459 195 2139 91 34 27 chr2 136994533 136994830 -116261753 - AluSx SINE Alu -13 299 1 831 223 114 67 chr2 136994830 136994967 -116261616 - MLT1C LTR MaLR -272 195 66 1861 141 27 20 chr2 136995022 136995319 -116261264 - AluJo SINE Alu -13 299 1 233 333 133 0 chr2 136995406 136995556 -116261027 - L1MEc LINE L1 -4842 2013 1844 319 322 76 43 chr2 136995729 136995940 -116260643 - L1MEc LINE L1 -5311 1548 1331 770 246 162 60 chr2 136996756 136997158 -116259425 - L1MC4a LINE L1 -1954 5854 5412 339 281 158 0 chr2 136997197 136997343 -116259240 - L1MC4a LINE L1 -833 5313 5145 2313 62 41 14 chr2 136997354 136997646 -116258937 - AluY SINE Alu -11 300 1 2398 74 20 0 chr2 136998238 136998534 -116258049 + AluY SINE Alu 1 302 -9 2309 102 0 0 chr2 136999599 136999894 -116256689 + AluSc SINE Alu 1 295 -14 901 215 60 15 chr2 137000268 137000575 -116256008 - MSTD LTR MaLR 0 396 19 2240 114 0 0 chr2 137000633 137000930 -116255653 + AluSx SINE Alu 1 297 -15 2240 90 33 13 chr2 137001269 137001568 -116255015 + AluSq SINE Alu 1 305 -8 2240 132 0 3 chr2 137001602 137001913 -116254670 + AluSx SINE Alu 1 310 -2 21 36 0 0 chr2 137002538 137002566 -116254017 + AT_rich Low_complexity Low_complexity 1 28 0 1996 213 78 30 chr2 137003255 137003869 -116252714 - L1ME1 LINE L1 -311 5855 5272 2338 91 0 0 chr2 137003869 137004165 -116252418 + AluSg SINE Alu 1 296 -14 1996 213 78 30 chr2 137004165 137004233 -116252350 - L1ME1 LINE L1 -894 5272 5209 2372 97 0 0 chr2 137004233 137004541 -116252042 + AluY SINE Alu 1 308 -3 1996 213 78 30 chr2 137004541 137004694 -116251889 - L1ME1 LINE L1 -957 5209 4932 2087 130 3 3 chr2 137005000 137005292 -116251291 - AluJb SINE Alu -20 292 1 258 275 37 28 chr2 137005434 137005543 -116251040 - Charlie8 DNA MER1_type -2182 235 126 2156 138 0 7 chr2 137005565 137005869 -116250714 + AluSx SINE Alu 1 302 -10 464 297 61 18 chr2 137005975 137006140 -116250443 - AluSg/x SINE Alu -19 293 122 210 128 0 0 chr2 137006263 137006302 -116250281 + (TG)n Simple_repeat Simple_repeat 1 39 0 1329 213 84 8 chr2 137006304 137006567 -116250016 - AluJo SINE Alu -29 283 1 2502 81 93 0 chr2 137006845 137007178 -116249405 + THE1B LTR MaLR 1 364 0 2524 53 0 47 chr2 137007551 137007872 -116248711 + AluY SINE Alu 1 306 -5 472 190 127 14 chr2 137007927 137008069 -116248514 + L1ME LINE L1 5534 5691 -430 2254 109 3 3 chr2 137008207 137008518 -116248065 - AluSx SINE Alu 0 312 2 350 306 16 102 chr2 137008672 137008927 -116247656 - HAL1 LINE L1 -11 2496 2264 1033 286 119 22 chr2 137009030 137009678 -116246905 - HAL1 LINE L1 -428 2079 1369 25 83 0 0 chr2 137009697 137009757 -116246826 + AT_rich Low_complexity Low_complexity 1 60 0 40 49 0 0 chr2 137010179 137010240 -116246343 + AT_rich Low_complexity Low_complexity 1 61 0 1617 191 14 14 chr2 137010241 137010529 -116246054 - AluJo SINE Alu -24 288 1 27 0 0 0 chr2 137010840 137010867 -116245716 + AT_rich Low_complexity Low_complexity 1 27 0 2326 97 3 3 chr2 137011278 137011577 -116245006 + AluSx SINE Alu 1 299 -13 2139 130 0 3 chr2 137012220 137012527 -116244056 - AluSx SINE Alu -6 306 1 788 141 7 22 chr2 137012718 137012853 -116243730 - FLAM_C SINE Alu 0 133 1 262 263 8 48 chr2 137012862 137012875 -116243708 - L1MC4 LINE L1 -26 8016 8004 2452 72 0 0 chr2 137012875 137013168 -116243415 + AluY SINE Alu 1 293 -18 262 263 8 48 chr2 137013168 137013263 -116243320 - L1MC4 LINE L1 -38 8004 7834 306 237 126 105 chr2 137013409 137013599 -116242984 - L1MC4 LINE L1 -296 7746 7553 2216 88 10 27 chr2 137013702 137013998 -116242585 + AluSg SINE Alu 1 291 -19 569 211 152 19 chr2 137014040 137014296 -116242287 - L1MC5 LINE L1 -86 7875 7586 316 260 31 0 chr2 137015135 137015231 -116241352 - L1MA10 LINE L1 -5 6329 6231 496 179 105 0 chr2 137015710 137015805 -116240778 + L1PB4 LINE L1 6029 6133 -23 2034 143 0 3 chr2 137015907 137016200 -116240383 + AluSx SINE Alu 14 305 -7 28 29 0 0 chr2 137016236 137016271 -116240312 + AT_rich Low_complexity Low_complexity 1 35 0 554 181 32 0 chr2 137016274 137016368 -116240215 - AluJb SINE Alu -23 289 193 1301 228 173 13 chr2 137016391 137016860 -116239723 - L1ME2 LINE L1 0 6164 5621 967 276 95 14 chr2 137016974 137017415 -116239168 - L1ME2 LINE L1 -9 6155 5679 307 290 134 16 chr2 137017593 137017779 -116238804 - HAL1 LINE L1 -2275 232 25 411 296 120 32 chr2 137017807 137018057 -116238526 - L1ME LINE L1 -338 5783 5512 1963 135 0 46 chr2 137019777 137020104 -116236479 - AluSx SINE Alu 0 312 1 1775 181 6 34 chr2 137020110 137020431 -116236152 - AluJo SINE Alu 0 312 1 1286 180 150 0 chr2 137020431 137020737 -116235846 - L1MB3 LINE L1 -41 6142 5791 970 200 88 11 chr2 137030773 137031058 -116225525 + MER33 DNA MER1_type 18 324 0 371 234 11 11 chr2 137031358 137031452 -116225131 - MER5A DNA MER1_type -59 130 37 195 277 202 8 chr2 137034547 137034666 -116221917 + MIR SINE MIR 41 182 -80 512 242 90 48 chr2 137035935 137036235 -116220348 + LTR50 LTR ERVL 345 751 -44 31 26 0 0 chr2 137038889 137038927 -116217656 + GC_rich Low_complexity Low_complexity 1 38 0 28 0 0 0 chr2 137039125 137039153 -116217430 + GC_rich Low_complexity Low_complexity 1 28 0 272 273 9 82 chr2 137039416 137039526 -116217057 - MIR SINE MIR -117 145 44 195 339 91 41 chr2 137039660 137039781 -116216802 - MIR SINE MIR -46 216 90 226 383 12 6 chr2 137040022 137040189 -116216394 + (TG)n Simple_repeat Simple_repeat 1 168 0 2015 149 0 3 chr2 137040876 137041184 -116215399 + AluJb SINE Alu 5 311 -1 198 250 146 0 chr2 137042501 137042597 -116213986 + L2 LINE L2 3201 3310 -3 2281 97 0 10 chr2 137044172 137044480 -116212103 + AluSq SINE Alu 1 305 -8 2196 95 10 0 chr2 137044651 137044947 -116211636 - AluSq SINE Alu -14 299 1 432 346 68 68 chr2 137046438 137046956 -116209627 - L1ME3A LINE L1 -3 6167 5650 632 215 68 6 chr2 137046957 137047120 -116209463 - MER106A DNA MER1_type 0 236 64 761 277 65 41 chr2 137047237 137047489 -116209094 - L1ME3A LINE L1 -623 5539 5295 189 74 0 0 chr2 137047489 137047516 -116209067 + (TATG)n Simple_repeat Simple_repeat 2 28 0 761 277 65 41 chr2 137047516 137047969 -116208614 - L1ME3A LINE L1 -867 5295 4815 425 193 17 122 chr2 137047972 137048152 -116208431 + MLT1E2 LTR MaLR 1 162 -343 196 333 19 57 chr2 137048291 137048396 -116208187 + L2 LINE L2 3136 3236 -36 2119 117 174 11 chr2 137048617 137048984 -116207599 + MSTA LTR MaLR 2 428 0 637 237 39 71 chr2 137049102 137049410 -116207173 - L1MC5 LINE L1 -32 7929 7632 2049 117 0 3 chr2 137049454 137049736 -116206847 + AluSg SINE Alu 4 284 -26 216 0 0 0 chr2 137049750 137049774 -116206809 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 399 290 35 7 chr2 137049778 137049923 -116206660 - L1MD2 LINE L1 -17 6342 6194 449 230 18 0 chr2 137049987 137050100 -116206483 - L1MD2 LINE L1 -452 5907 5793 1911 88 103 11 chr2 137150486 137150758 -116105825 + AluSp SINE Alu 1 297 -16 2178 114 0 3 chr2 137154676 137154966 -116101617 - AluSp SINE Alu -24 289 1 1093 267 80 47 chr2 137155445 137155894 -116100689 + LTR16B LTR ERVL 1 464 0 186 103 0 0 chr2 137157430 137157459 -116099124 + (TG)n Simple_repeat Simple_repeat 2 30 0 2291 87 3 0 chr2 137157712 137158001 -116098582 + AluSp SINE Alu 1 290 -23 380 273 128 52 chr2 137158079 137158368 -116098215 - L1ME4a LINE L1 -78 6043 5733 221 188 0 50 chr2 137158824 137158904 -116097679 + (TAA)n Simple_repeat Simple_repeat 1 76 0 2321 101 0 19 chr2 137159178 137159486 -116097097 - AluSg SINE Alu -8 302 1 526 29 0 0 chr2 137160334 137160403 -116096180 - Charlie3 DNA MER1_type -110 2600 2532 * 664 188 7 45 chr2 137160396 137160550 -116096033 + Charlie3 DNA MER1_type 183 330 -2380 * 920 155 138 0 chr2 137160455 137160629 -116095954 - Charlie3 DNA MER1_type -2512 198 1 247 156 22 0 chr2 137160635 137160680 -116095903 - MER75 DNA T2_type 0 504 459 2079 271 55 12 chr2 137161378 137162068 -116094515 - L1MC2 LINE L1 -37 6307 5588 906 250 118 22 chr2 137162050 137162550 -116094033 - L1MC2 LINE L1 -2570 3576 3029 * 247 259 94 0 chr2 137162554 137162639 -116093944 + L1MB4 LINE L1 6084 6176 -4 270 301 113 50 chr2 137164569 137164851 -116091732 - L2 LINE L2 -679 2635 2336 455 322 114 26 chr2 137164917 137165345 -116091238 + L1M4 LINE L1 2 467 -6075 2732 194 51 5 chr2 137165380 137165969 -116090614 + L1MB4 LINE L1 5537 6152 -28 788 62 0 0 chr2 137169332 137169429 -116087154 + L1P LINE L1 2 98 -6048 * 36540 40 2 2 chr2 137169423 137173824 -116082759 + L1P LINE L1 617 5016 -1130 668 143 56 32 chr2 137173942 137174068 -116082515 + Charlie3 DNA MER1_type 2577 2705 -5 221 263 132 53 chr2 137174244 137174358 -116082225 + MIR SINE MIR 13 135 -127 435 215 43 110 chr2 137174668 137174877 -116081706 - LOR1-int LTR ERV1 -2868 3730 3536 595 199 28 47 chr2 137174949 137175279 -116081304 - LOR1-int LTR ERV1 -2443 4311 2290 321 319 29 19 chr2 137175349 137175556 -116081027 - L1M4 LINE L1 -2361 3785 3577 525 249 28 55 chr2 137175821 137176038 -116080545 - HSATI Satellite Satellite -323 254 44 1846 42 0 54 chr2 137176521 137176761 -116079822 - L1PA4 LINE L1 0 6155 5929 2425 25 0 0 chr2 137176762 137177166 -116079417 + L1P2 LINE L1 5114 5517 -638 442 280 79 21 chr2 137177993 137178272 -116078311 + L1MB8 LINE L1 5864 6158 -20 218 278 74 28 chr2 137178553 137178661 -116077922 + MIR SINE MIR 19 131 -131 1668 276 47 11 chr2 137180427 137181127 -116075456 + L1M4 LINE L1 2339 3063 -3083 772 285 49 8 chr2 137181130 137181393 -116075190 + L1M4 LINE L1 457 730 -5812 1902 188 21 6 chr2 137181394 137182029 -116074554 + L1M1 LINE L1 3316 3968 -3597 3579 79 9 2 chr2 137183661 137184116 -116072467 + LTR22A LTR ERVK 1 458 0 211 150 0 62 chr2 137185078 137185158 -116071425 + (TG)n Simple_repeat Simple_repeat 2 76 0 804 152 8 8 chr2 137186407 137186539 -116070044 - AluJo SINE Alu -174 138 7 993 198 0 59 chr2 137186633 137186870 -116069713 - AluJb SINE Alu -5 307 85 523 183 21 11 chr2 137186870 137186963 -116069620 - AluSc SINE Alu -61 248 155 336 239 0 0 chr2 137186965 137187128 -116069455 + (TG)n Simple_repeat Simple_repeat 2 164 0 561 269 60 6 chr2 137188185 137188352 -116068231 - MER67D LTR ERV1 -114 400 225 23 33 0 0 chr2 137188370 137188400 -116068183 + AT_rich Low_complexity Low_complexity 1 30 0 1983 85 7 0 chr2 137193372 137193684 -116062899 - AluSp SINE Alu 0 326 13 213 282 0 29 chr2 137194313 137194416 -116062167 + (CGG)n Simple_repeat Simple_repeat 2 101 0 408 125 0 0 chr2 137195048 137195112 -116061471 + (GGGA)n Simple_repeat Simple_repeat 1 64 0 200 33 0 33 chr2 137195401 137195431 -116061152 + (CA)n Simple_repeat Simple_repeat 2 30 0 247 352 106 22 chr2 137195495 137195722 -116060861 - MIR SINE MIR -15 247 2 428 228 20 30 chr2 137196161 137196262 -116060321 - MIR SINE MIR -143 119 20 184 381 91 34 chr2 137196272 137196448 -116060135 + MER5A DNA MER1_type 1 186 -3 598 136 0 55 chr2 137196954 137197064 -116059519 - AluSg/x SINE Alu -1 308 205 447 284 88 54 chr2 137197068 137197364 -116059219 - L1M4 LINE L1 -1444 4702 4397 2397 68 3 3 chr2 137197388 137197699 -116058884 - AluY SINE Alu 0 311 1 299 299 30 22 chr2 137197857 137197991 -116058592 - L1M4 LINE L1 -1989 4157 4023 611 275 179 5 chr2 137199215 137199422 -116057161 + MIR SINE MIR 4 246 -16 25 75 0 0 chr2 137199748 137199801 -116056782 + AT_rich Low_complexity Low_complexity 1 53 0 229 316 209 43 chr2 137200717 137201090 -116055493 + L2 LINE L2 2837 3271 -1 261 0 0 0 chr2 137201617 137201646 -116054937 + (T)n Simple_repeat Simple_repeat 1 29 0 7698 29 1 0 chr2 137202575 137203619 -116052964 + L1PA3 LINE L1 5132 6176 0 203 333 155 0 chr2 137212467 137212635 -116043948 + MIR3 SINE MIR 3 196 -12 300 237 242 30 chr2 137213179 137213377 -116043206 + MIR SINE MIR 2 241 -21 194 270 32 0 chr2 137214733 137214796 -116041787 - L2 LINE L2 -2 3270 3206 489 301 72 16 chr2 137216712 137216905 -116039678 - MIR SINE MIR -36 226 23 29 0 0 0 chr2 137217381 137217410 -116039173 + AT_rich Low_complexity Low_complexity 1 29 0 1609 150 20 3 chr2 137218319 137218613 -116037970 + AluSq SINE Alu 1 299 -14 463 149 106 11 chr2 137219162 137219256 -116037327 + MER4A LTR ERV1 1 103 -561 252 189 19 19 chr2 137219253 137219306 -116037277 + MER4A LTR ERV1 261 313 -351 * 225 158 53 0 chr2 137219758 137219815 -116036768 + (CTG)n Simple_repeat Simple_repeat 1 60 0 1644 109 89 4 chr2 137219877 137220165 -116036418 - AluSg SINE Alu 0 310 1 1689 179 6 9 chr2 137220165 137220511 -116036072 - L1 LINE L1 -3000 3146 2802 21 89 0 0 chr2 137220511 137220567 -116036016 + AT_rich Low_complexity Low_complexity 1 56 0 447 265 137 40 chr2 137220936 137221205 -116035378 - L1MC/D LINE L1 -769 5377 5132 286 326 0 28 chr2 137221239 137221383 -116035200 - L2 LINE L2 -1602 1712 1573 1943 168 72 27 chr2 137221383 137221913 -116034670 + MLT2A2 LTR ERVL 1 554 0 871 296 103 8 chr2 137221925 137222276 -116034307 - L2 LINE L2 -1749 1565 1182 3236 133 24 8 chr2 137222312 137222844 -116033739 - L1MC1 LINE L1 -257 6076 5536 24 32 0 0 chr2 137223433 137223464 -116033119 + AT_rich Low_complexity Low_complexity 1 31 0 356 86 0 17 chr2 137224203 137224261 -116032322 + (TG)n Simple_repeat Simple_repeat 2 58 0 5703 60 6 0 chr2 137224665 137225371 -116031212 + L1PA6 LINE L1 5445 6154 0 450 157 29 0 chr2 137225745 137225847 -116030736 + GA-rich Low_complexity Low_complexity 2 106 0 2082 114 0 13 chr2 137227018 137227325 -116029258 + AluSc SINE Alu 1 303 -6 2211 61 0 0 chr2 137227428 137227817 -116028766 - L1MC1 LINE L1 -686 5468 5108 2232 52 4 0 chr2 137227817 137228088 -116028495 + L1PA6 LINE L1 5515 5786 -368 3033 50 13 0 chr2 137229820 137230197 -116026386 + L1PA6 LINE L1 5770 6151 -3 2073 102 10 0 chr2 137230995 137231288 -116025295 - AluSq SINE Alu -2 311 16 1632 177 13 13 chr2 137231598 137231882 -116024701 + AluJo SINE Alu 1 287 -25 252 59 0 0 chr2 137231882 137231916 -116024667 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 1632 177 13 13 chr2 137231916 137231931 -116024652 + AluJo SINE Alu 286 300 -12 280 257 19 95 chr2 137232612 137232717 -116023866 + L2 LINE L2 3123 3219 -53 275 280 109 56 chr2 137233714 137233888 -116022695 + MER5A DNA MER1_type 7 188 -1 44272 44 3 7 chr2 137234019 137240201 -116016382 + L1PA4 LINE L1 1 6155 0 3993 88 11 0 chr2 137240209 137240743 -116015840 - L1PA7 LINE L1 -126 6028 5489 828 104 0 0 chr2 137240743 137240849 -116015734 + L1PA7 LINE L1 6032 6146 -8 26 0 0 0 chr2 137240867 137240893 -116015690 + AT_rich Low_complexity Low_complexity 1 26 0 252 0 0 0 chr2 137243245 137243273 -116013310 + (A)n Simple_repeat Simple_repeat 1 28 0 195 129 0 0 chr2 137246995 137247026 -116009557 + (GA)n Simple_repeat Simple_repeat 2 32 0 210 167 0 119 chr2 137249253 137249337 -116007246 + C-rich Low_complexity Low_complexity 2 75 0 208 100 0 50 chr2 137250095 137250135 -116006448 + (CGGGG)n Simple_repeat Simple_repeat 5 42 0 222 204 0 0 chr2 137252258 137252302 -116004281 + GA-rich Low_complexity Low_complexity 2 45 0 528 256 242 22 chr2 137252885 137253154 -116003429 + L2 LINE L2 1782 2109 -1205 948 219 6 0 chr2 137253155 137253324 -116003259 - MER45A DNA AcHobo -1 177 8 1999 269 109 18 chr2 137253365 137254193 -116002390 + L2 LINE L2 2170 3049 -264 366 318 0 9 chr2 137254639 137254746 -116001837 + L2 LINE L2 3208 3313 0 340 251 87 104 chr2 137255562 137255600 -116000983 - L1ME4a LINE L1 0 6121 6084 1629 189 0 13 chr2 137255600 137255902 -116000681 + AluJo SINE Alu 3 300 -12 1806 89 92 0 chr2 137255907 137256178 -116000405 + AluSc SINE Alu 1 296 -13 340 251 87 104 chr2 137256178 137256316 -116000267 - L1ME4a LINE L1 -41 6080 5942 1095 235 91 3 chr2 137256690 137256988 -115999595 - MER5C DNA MER1_type 0 324 1 739 280 152 60 chr2 137257119 137257169 -115999414 - Charlie7 DNA MER1_type -1873 739 695 2397 48 0 22 chr2 137257169 137257481 -115999102 - AluY SINE Alu -6 305 1 739 280 152 60 chr2 137257481 137257903 -115998680 - Charlie7 DNA MER1_type -1917 695 190 7539 38 5 0 chr2 137257903 137258854 -115997729 + L1PA4 LINE L1 5200 6154 -1 739 280 152 60 chr2 137258854 137259026 -115997557 - Charlie7 DNA MER1_type -2422 190 35 266 294 0 124 chr2 137259093 137259226 -115997357 + MER5A DNA MER1_type 56 169 -20 1949 142 0 7 chr2 137259226 137259521 -115997062 - AluSx SINE Alu -19 293 1 266 294 0 124 chr2 137259521 137259540 -115997043 + MER5A DNA MER1_type 169 189 0 334 275 51 36 chr2 137259688 137259826 -115996757 - L1M4 LINE L1 -2694 3452 3313 2108 100 7 3 chr2 137260022 137260322 -115996261 + AluSg SINE Alu 1 301 -9 243 362 51 6 chr2 137261105 137261282 -115995301 + L2 LINE L2 2599 2783 -531 2323 86 0 0 chr2 137261578 137261881 -115994702 - AluY SINE Alu -8 303 1 639 314 152 52 chr2 137261883 137262861 -115993722 - L1M4 LINE L1 -768 5378 4303 811 301 51 52 chr2 137263448 137264091 -115992492 + L2 LINE L2 2632 3269 -3 1534 102 14 0 chr2 137265013 137265229 -115991354 + AluSp SINE Alu 83 301 -12 370 288 117 45 chr2 137265780 137266002 -115990581 - MIR SINE MIR -11 251 14 2220 103 0 0 chr2 137267202 137267503 -115989080 - AluSg SINE Alu -9 301 1 331 231 19 0 chr2 137268282 137268390 -115988193 + CT-rich Low_complexity Low_complexity 2 111 0 2061 115 3 0 chr2 137268692 137268987 -115987596 - AluSx SINE Alu -11 301 6 197 254 134 0 chr2 137269383 137269450 -115987133 + MIR SINE MIR 54 129 -133 189 0 0 0 chr2 137269713 137269734 -115986849 + (CGG)n Simple_repeat Simple_repeat 2 22 0 317 205 0 55 chr2 137269807 137269934 -115986649 + C-rich Low_complexity Low_complexity 3 122 0 412 110 41 0 chr2 137270371 137270444 -115986139 + AluS SINE Alu 5 80 -232 1270 72 98 148 chr2 137270444 137270679 -115985904 + MSTA LTR MaLR 166 386 -42 2019 90 0 0 chr2 137270679 137270946 -115985637 - AluSx SINE Alu -45 267 1 1270 72 98 148 chr2 137270946 137270987 -115985596 + MSTA LTR MaLR 386 428 0 237 275 33 22 chr2 137271586 137271677 -115984906 - L1MC5 LINE L1 -32 7929 7838 1931 118 13 16 chr2 137271688 137272001 -115984582 - AluSx SINE Alu 0 312 1 1540 179 3 7 chr2 137272293 137272583 -115984000 - AluSx SINE Alu -23 289 1 1408 189 85 70 chr2 137272705 137272932 -115983651 + Charlie1 DNA MER1_type 2296 2518 -243 2199 106 0 0 chr2 137272932 137273233 -115983350 + AluSx SINE Alu 1 301 -11 1408 189 85 70 chr2 137273233 137273464 -115983119 + Charlie1 DNA MER1_type 2518 2761 0 2277 95 0 0 chr2 137273843 137274138 -115982445 - AluSq SINE Alu -18 295 1 827 116 47 16 chr2 137274803 137274932 -115981651 + FLAM_C SINE Alu 1 133 0 508 116 58 0 chr2 137275422 137275508 -115981075 + AluSc SINE Alu 219 309 0 262 185 0 0 chr2 137276496 137276550 -115980033 + L1ME4a LINE L1 6068 6121 0 1379 195 179 7 chr2 137276556 137276853 -115979730 + MER7A DNA MER2_type 1 346 0 1155 185 111 23 chr2 137276929 137277264 -115979319 + MLT1A2 LTR MaLR 3 390 0 617 194 0 8 chr2 137277666 137277795 -115978788 + FLAM_A SINE Alu 15 142 0 1119 147 49 40 chr2 137277913 137278137 -115978446 + LTR23 LTR ERV1 2 227 -210 2262 71 0 3 chr2 137278137 137278432 -115978151 - AluY SINE Alu -17 294 1 2214 116 3 0 chr2 137278435 137278745 -115977838 - AluSq SINE Alu -2 311 1 436 178 14 0 chr2 137278793 137278866 -115977717 + FLAM SINE Alu 46 119 -24 751 104 94 115 chr2 137278870 137279003 -115977580 + LTR23 LTR ERV1 245 379 -58 1688 144 0 64 chr2 137279003 137279315 -115977268 - AluSx SINE Alu -20 292 1 751 104 94 115 chr2 137279315 137279354 -115977229 + LTR23 LTR ERV1 379 415 -22 2142 84 6 13 chr2 137279354 137279665 -115976918 - AluSq SINE Alu -4 309 1 751 104 94 115 chr2 137279665 137279683 -115976900 + LTR23 LTR ERV1 415 432 -5 1604 161 13 3 chr2 137280687 137280985 -115975598 + AluJb SINE Alu 1 301 -11 1569 183 13 22 chr2 137281059 137281370 -115975213 - AluJo SINE Alu -4 308 1 1045 270 84 13 chr2 137281371 137281763 -115974820 - LTR33 LTR ERVL -92 429 10 2085 127 0 0 chr2 137283593 137283892 -115972691 + AluSx SINE Alu 1 299 -13 2321 101 7 0 chr2 137284942 137285239 -115971344 - AluSx SINE Alu -13 299 1 1813 164 7 11 chr2 137285296 137285471 -115971112 - AluSx SINE Alu 0 308 133 2291 101 10 0 chr2 137285471 137285768 -115970815 - AluSx SINE Alu -12 300 1 1813 164 7 11 chr2 137285768 137285901 -115970682 - AluSx SINE Alu -175 133 1 1694 96 9 5 chr2 137287531 137287776 -115968807 + AluY SINE Alu 62 307 0 23 0 0 0 chr2 137287958 137287981 -115968602 + AT_rich Low_complexity Low_complexity 1 23 0 1949 175 51 65 chr2 137289232 137289723 -115966860 + LTR42 LTR ERVL 1 484 -11 679 219 26 7 chr2 137290672 137290823 -115965760 - FRAM SINE Alu -26 150 1 1843 151 21 3 chr2 137291239 137291530 -115965053 + AluJo SINE Alu 10 305 -7 277 198 62 0 chr2 137291557 137291638 -115964945 - Charlie5 DNA MER1_type -96 2516 2431 1566 84 0 0 chr2 137291793 137291984 -115964599 + AluSp SINE Alu 108 298 -15 243 200 30 80 chr2 137292184 137292284 -115964299 - L1M LINE L1 -2410 5398 5304 323 315 91 55 chr2 137292459 137292713 -115963870 - L1M4 LINE L1 -1526 4620 4358 348 297 108 20 chr2 137292841 137292989 -115963594 - L1M4 LINE L1 -1958 4188 4028 5451 62 0 16 chr2 137293002 137293743 -115962840 + L1PA7 LINE L1 5423 6151 -3 1928 138 14 3 chr2 137294241 137294532 -115962051 + AluSx SINE Alu 13 306 -6 347 0 23 0 chr2 137294532 137294575 -115962008 + (GGAA)n Simple_repeat Simple_repeat 1 44 0 213 132 0 0 chr2 137294960 137294998 -115961585 + (T)n Simple_repeat Simple_repeat 1 38 0 2304 89 10 0 chr2 137295054 137295346 -115961237 - AluSc SINE Alu -13 296 2 2540 51 6 13 chr2 137295401 137295714 -115960869 - AluY SINE Alu 0 311 1 1754 134 11 32 chr2 137296282 137296566 -115960017 + AluJb SINE Alu 35 312 0 1333 266 35 62 chr2 137297007 137297491 -115959092 - MLT1G1 LTR MaLR 0 595 125 2848 251 87 64 chr2 137298339 137298601 -115957982 + Tigger6b DNA MER2_type 1 256 -1341 2381 82 0 23 chr2 137298601 137298904 -115957679 - AluSc SINE Alu -13 296 1 2848 251 87 64 chr2 137298904 137299772 -115956811 + Tigger6b DNA MER2_type 256 1178 -419 230 0 33 0 chr2 137299772 137299802 -115956781 + (CAAAA)n Simple_repeat Simple_repeat 1 31 0 2848 251 87 64 chr2 137299802 137300231 -115956352 + Tigger6b DNA MER2_type 1178 1596 -1 2371 84 3 3 chr2 137301271 137301567 -115955016 + AluSp SINE Alu 1 296 -17 930 158 17 28 chr2 137302586 137302763 -115953820 - FAM SINE Alu 0 175 1 2174 114 30 0 chr2 137303033 137303331 -115953252 + AluY SINE Alu 1 307 -4 2141 124 0 0 chr2 137303771 137304095 -115952488 - AluSg SINE Alu 0 324 1 767 280 166 22 chr2 137304871 137305215 -115951368 + L2 LINE L2 1281 1709 -1605 2139 212 18 4 chr2 137305215 137305673 -115950910 - MER88 LTR ERVL 0 464 1 767 280 166 22 chr2 137305673 137305785 -115950798 + L2 LINE L2 1709 1803 -1511 276 199 0 130 chr2 137306074 137306235 -115950348 + C-rich Low_complexity Low_complexity 2 141 0 687 69 30 10 chr2 137306528 137306629 -115949954 - AluSq/x SINE Alu -209 104 2 2473 80 13 0 chr2 137306714 137307016 -115949567 + AluSp SINE Alu 1 306 -7 279 196 0 78 chr2 137307053 137307155 -115949428 + G-rich Low_complexity Low_complexity 5 98 0 203 171 0 0 chr2 137307265 137307300 -115949283 + (CTGGGG)n Simple_repeat Simple_repeat 5 39 0 685 304 160 5 chr2 137310082 137310451 -115946132 - MLT1J LTR MaLR -85 426 1 1493 274 47 18 chr2 137310600 137311089 -115945494 + L1ME3A LINE L1 5656 6158 -12 702 178 15 30 chr2 137311615 137311750 -115944833 - FLAM_C SINE Alu 0 133 1 1755 159 0 0 chr2 137311765 137312029 -115944554 - AluJb SINE Alu -14 298 35 1824 136 9 67 chr2 137313183 137313365 -115943218 - AluJo SINE Alu -2 310 152 2509 60 0 13 chr2 137313365 137313664 -115942919 - AluY SINE Alu -16 295 1 1824 136 9 67 chr2 137313664 137313797 -115942786 - AluJo SINE Alu -160 152 13 575 177 62 0 chr2 137315441 137315554 -115941029 - FLAM_C SINE Alu -13 120 1 23 0 0 0 chr2 137316389 137316412 -115940171 + GC_rich Low_complexity Low_complexity 1 23 0 235 250 0 0 chr2 137316663 137316715 -115939868 + L2 LINE L2 3250 3301 -12 227 31 31 0 chr2 137317649 137317681 -115938902 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 2349 68 3 26 chr2 137318089 137318399 -115938184 + AluSg1 SINE Alu 1 303 -6 2348 48 19 26 chr2 137318402 137318711 -115937872 + AluY SINE Alu 1 307 -4 2129 145 0 0 chr2 137319000 137319311 -115937272 - AluSx SINE Alu -1 311 1 386 258 38 23 chr2 137319443 137319575 -115937008 + MIR SINE MIR 49 182 -80 1242 211 107 0 chr2 137319580 137319841 -115936742 - MLT1E2 LTR MaLR -8 618 330 615 171 150 14 chr2 137319837 137319977 -115936606 - MLT1E2 LTR MaLR -464 160 2 * 219 307 13 13 chr2 137319977 137320052 -115936531 + MIR SINE MIR 178 252 -10 2118 132 3 0 chr2 137320117 137320412 -115936171 - AluSx SINE Alu -14 298 3 1801 172 3 3 chr2 137320448 137320733 -115935850 + AluJo SINE Alu 1 285 -27 1574 171 40 53 chr2 137320839 137321143 -115935440 + AluJo SINE Alu 1 300 -12 680 168 56 8 chr2 137321711 137321836 -115934747 + FLAM_A SINE Alu 2 132 -1 1139 161 14 36 chr2 137323112 137323335 -115933248 + MER20 DNA MER1_type 1 218 -1 2008 157 0 0 chr2 137323537 137323817 -115932766 + AluJb SINE Alu 9 288 -24 29 0 0 0 chr2 137323830 137323859 -115932724 + AT_rich Low_complexity Low_complexity 1 29 0 1928 117 0 0 chr2 137326450 137326699 -115929884 + AluSx SINE Alu 1 249 -63 230 81 27 0 chr2 137326700 137326737 -115929846 + (CA)n Simple_repeat Simple_repeat 1 38 0 2032 125 0 17 chr2 137326772 137327092 -115929491 - AluSx SINE Alu 0 316 2 1595 195 10 3 chr2 137327093 137327390 -115929193 - AluJo SINE Alu -4 308 10 1809 121 99 0 chr2 137327407 137327679 -115928904 - AluSq SINE Alu -14 299 1 300 231 53 0 chr2 137327692 137327791 -115928792 - AluJ/FRAM SINE Alu -14 288 228 840 136 7 36 chr2 137327818 137327958 -115928625 - FLAM_A SINE Alu -2 140 5 902 235 25 35 chr2 137327962 137328026 -115928557 - L1MC4 LINE L1 0 8042 7979 1704 171 10 29 chr2 137328026 137328336 -115928247 + AluJo SINE Alu 1 304 -8 902 235 25 35 chr2 137328336 137328556 -115928027 - L1MC4 LINE L1 -63 7979 7761 267 233 93 0 chr2 137328591 137328677 -115927906 - L1MC4 LINE L1 -383 7659 7566 269 250 0 0 chr2 137328793 137328853 -115927730 - L1MC4a LINE L1 -513 7295 7236 1918 176 3 0 chr2 137328876 137329178 -115927405 + AluSx SINE Alu 1 303 -9 965 197 131 0 chr2 137329190 137329373 -115927210 + AluJo SINE Alu 88 294 -18 1200 174 0 28 chr2 137329468 137329680 -115926903 - AluJb SINE Alu -22 290 85 1509 198 3 23 chr2 137329683 137329986 -115926597 - AluJo SINE Alu -15 297 1 637 251 44 95 chr2 137329987 137330282 -115926301 - L1MC4 LINE L1 -823 7219 6940 2109 145 0 3 chr2 137330457 137330767 -115925816 + AluSx SINE Alu 1 309 -3 2034 127 46 0 chr2 137331551 137331835 -115924748 - AluSx SINE Alu -15 297 1 1834 177 3 10 chr2 137331836 137332136 -115924447 - AluJo SINE Alu -11 301 4 1126 261 22 8 chr2 137332140 137332496 -115924087 - L1M4 LINE L1 -941 5205 4845 206 319 18 31 chr2 137335523 137335686 -115920897 + CT-rich Low_complexity Low_complexity 1 161 0 2274 120 3 0 chr2 137337303 137337602 -115918981 - AluSx SINE Alu -12 300 1 1909 145 0 14 chr2 137337662 137337959 -115918624 + AluJb SINE Alu 1 293 -19 1594 132 147 0 chr2 137338385 137338643 -115917940 + AluSx SINE Alu 1 296 -16 1565 196 28 7 chr2 137338815 137339100 -115917483 - AluJo SINE Alu -19 293 3 303 261 11 0 chr2 137340064 137340152 -115916431 + MIR SINE MIR 61 149 -113 994 204 17 6 chr2 137345711 137345892 -115910691 + AluJb SINE Alu 108 290 -22 1710 161 7 7 chr2 137346883 137347163 -115909420 - AluJo SINE Alu -26 286 7 2267 107 17 0 chr2 137347310 137347609 -115908974 + AluSx SINE Alu 1 304 -8 1787 232 130 27 chr2 137347615 137348167 -115908416 + MER50 LTR ERV1 126 734 0 516 53 0 0 chr2 137348210 137348286 -115908297 + ERVL-B1 LTR ERVL 5683 5758 -6 596 213 0 0 chr2 137348287 137348409 -115908174 + MLT2B1 LTR ERVL 3 124 -396 1267 236 9 51 chr2 137348410 137348745 -115907838 + L1M4c LINE L1 248 568 -5816 1439 168 34 38 chr2 137348745 137349007 -115907576 + AluJo SINE Alu 3 263 -49 476 133 165 19 chr2 137349072 137349218 -115907365 - L1MCa LINE L1 -4407 2157 1985 1260 187 134 0 chr2 137349218 137349480 -115907103 - AluJo SINE Alu -4 298 2 476 133 165 19 chr2 137349480 137349491 -115907092 - L1MCa LINE L1 -4579 1985 1977 1869 187 0 3 chr2 137349513 137349676 -115906907 - AluSx SINE Alu -13 299 136 2341 52 0 0 chr2 137349676 137349944 -115906639 - AluY SINE Alu -5 306 39 1869 187 0 3 chr2 137349944 137350080 -115906503 - AluSx SINE Alu -176 136 1 2211 139 3 3 chr2 137350101 137350411 -115906172 - AluSx SINE Alu -2 310 1 1958 212 74 4 chr2 137350415 137350915 -115905668 - L1MCa LINE L1 -4864 1181 647 391 313 8 8 chr2 137350902 137351036 -115905547 - L1MCa LINE L1 -5805 759 626 * 1339 179 6 79 chr2 137351040 137351393 -115905190 - AluJb SINE Alu 0 312 3 227 148 19 37 chr2 137351394 137351448 -115905135 - Alu SINE Alu 0 302 250 2019 119 17 0 chr2 137351465 137351759 -115904824 - AluSx SINE Alu -13 299 1 2552 57 0 3 chr2 137352495 137352794 -115903789 + AluY SINE Alu 3 300 -11 216 291 0 0 chr2 137352961 137353016 -115903567 + C-rich Low_complexity Low_complexity 1 55 0 195 244 115 13 chr2 137355486 137355564 -115901019 - MIR SINE MIR -62 146 61 2492 67 0 13 chr2 137361398 137361698 -115894885 - AluY SINE Alu -15 296 1 454 274 76 84 chr2 137361699 137361792 -115894791 + L1ME4a LINE L1 5866 5958 -163 213 39 0 0 chr2 137361792 137361818 -115894765 + (TG)n Simple_repeat Simple_repeat 1 26 0 454 274 76 84 chr2 137361818 137361961 -115894622 + L1ME4a LINE L1 5958 6100 -21 503 167 0 0 chr2 137361996 137362080 -115894503 - AluSg/x SINE Alu -65 247 164 710 168 26 16 chr2 137362082 137362273 -115894310 + L1M1 LINE L1 3306 3498 -4067 10214 199 49 45 chr2 137362301 137363008 -115893575 + L1M1 LINE L1 3460 4163 -3402 1927 88 81 0 chr2 137363008 137363294 -115893289 + AluY SINE Alu 1 307 0 10214 199 49 45 chr2 137363294 137365855 -115890728 + L1M1 LINE L1 4163 6741 -824 682 259 73 65 chr2 137367711 137368402 -115888181 + HSREP522 Satellite telomeric 1 696 -100 306 0 0 0 chr2 137369474 137369508 -115887075 + (TG)n Simple_repeat Simple_repeat 2 35 0 2349 90 0 13 chr2 137369508 137369807 -115886776 - AluY SINE Alu -16 295 1 308 292 17 0 chr2 137369912 137370032 -115886551 + CT-rich Low_complexity Low_complexity 2 123 0 913 94 0 0 chr2 137370209 137370337 -115886246 - MER85 DNA T2_type -11 128 1 2232 123 7 0 chr2 137370520 137370830 -115885753 - AluSp SINE Alu -1 312 1 2226 131 0 0 chr2 137370930 137371236 -115885347 - AluSq SINE Alu -7 306 1 181 338 54 0 chr2 137371942 137372016 -115884567 + MIR SINE MIR 77 154 -108 1354 191 26 7 chr2 137372016 137372289 -115884294 + LOR1-int LTR ERV1 2077 2354 -3592 817 168 46 24 chr2 137372288 137372514 -115884069 + LOR1-int LTR ERV1 1839 2572 -2443 * 2104 156 53 23 chr2 137372545 137372980 -115883603 + LOR1-int LTR ERV1 2782 3229 -2717 1801 199 64 28 chr2 137373857 137374467 -115882116 + L1MB8 LINE L1 4114 4773 -1373 320 196 54 0 chr2 137374440 137374532 -115882051 + L1P LINE L1 4858 4954 -1192 * 1815 206 59 58 chr2 137374534 137375125 -115881458 + L1MB8 LINE L1 5587 6178 0 4873 157 32 33 chr2 137375165 137375896 -115880687 - L1PB1 LINE L1 -3 6148 5418 1899 114 59 0 chr2 137375896 137376168 -115880415 - AluSc SINE Alu -21 288 1 4873 157 32 33 chr2 137376168 137376950 -115879633 - L1PB1 LINE L1 -733 5418 4639 1396 183 39 28 chr2 137377454 137377739 -115878844 - AluJo SINE Alu -24 288 1 348 324 68 14 chr2 137377875 137378097 -115878486 - L1 LINE L1 -784 5362 5129 1707 169 0 18 chr2 137378099 137378372 -115878211 + AluJb SINE Alu 1 268 -44 323 203 17 0 chr2 137378417 137378476 -115878107 - AluJ/FRAM SINE Alu -13 289 230 280 276 49 74 chr2 137378478 137378637 -115877946 - L1 LINE L1 -1424 4722 4564 2270 258 90 28 chr2 137378637 137379534 -115877049 - L1MA6 LINE L1 -49 6251 4486 1486 269 55 13 chr2 137379810 137380758 -115875825 - L1PA16 LINE L1 -246 5920 4884 237 250 0 12 chr2 137380773 137380853 -115875730 - L1 LINE L1 -1453 4693 4615 1837 293 42 40 chr2 137380885 137381867 -115874716 - L1MA6 LINE L1 -37 6263 5280 538 178 21 16 chr2 137382094 137382301 -115874282 + MER4-int LTR ERV1 359 609 -5989 * 999 86 91 135 chr2 137382279 137382624 -115873959 + MER4-int LTR ERV1 503 749 -4266 * 3163 96 232 182 chr2 137382619 137382857 -115873726 + MER4-int LTR ERV1 1780 2005 -4593 2573 184 63 72 chr2 137382857 137383554 -115873029 - LTR8 LTR ERV1 0 691 1 3163 96 232 182 chr2 137383554 137384783 -115871800 + MER4-int LTR ERV1 2005 3320 -3278 2923 101 83 38 chr2 137384779 137385328 -115871255 + MER4A-int LTR ERV1 3916 4490 -2103 4195 23 0 14 chr2 137385328 137385815 -115870768 - L1PA2 LINE L1 0 6155 5676 11111 118 66 22 chr2 137385815 137387740 -115868843 + MER4A-int LTR ERV1 3915 6597 -1 517 118 108 0 chr2 137387742 137387835 -115868748 + MER4A LTR ERV1 1 103 -561 * 1489 154 183 76 chr2 137387832 137388176 -115868407 + MER4A LTR ERV1 261 641 -23 238 299 50 35 chr2 137388181 137388382 -115868201 - L1MA6 LINE L1 -1310 4836 4633 1745 260 68 14 chr2 137388506 137389137 -115867446 - L1MA6 LINE L1 -129 6171 5507 246 297 20 45 chr2 137389251 137389453 -115867130 - L1MA6 LINE L1 -789 5357 5161 2069 259 35 49 chr2 137390009 137390801 -115865782 - L1PA16 LINE L1 -14 6152 5372 431 170 142 0 chr2 137392240 137392346 -115864237 - L1PA16 LINE L1 -1 6165 6045 226 314 19 19 chr2 137392350 137392455 -115864128 + LTR33A LTR ERVL 30 134 -389 360 320 178 9 chr2 137392517 137392742 -115863841 + LTR33A LTR ERVL 259 521 -2 482 114 34 57 chr2 137393173 137393261 -115863322 - AluJ/FLAM SINE Alu -225 87 2 478 224 23 63 chr2 137393263 137393437 -115863146 + L1MB8 LINE L1 4227 4393 -1753 4840 208 49 26 chr2 137393778 137393831 -115862752 + L1M2 LINE L1 4133 4183 -2108 1905 117 0 8 chr2 137393831 137394088 -115862495 - AluSg SINE Alu -55 255 1 4840 208 49 26 chr2 137394088 137395358 -115861225 + L1M2 LINE L1 4183 5495 -796 2315 99 0 10 chr2 137395358 137395671 -115860912 + AluSx SINE Alu 1 310 -2 4840 208 49 26 chr2 137395671 137395964 -115860619 + L1M2 LINE L1 5495 5780 -511 2389 207 80 31 chr2 137395959 137396598 -115859985 + L1MB8 LINE L1 5508 6177 -1 * 6777 171 28 22 chr2 137396652 137398973 -115857610 - L1PB1 LINE L1 0 6151 3827 1310 154 35 52 chr2 137399466 137399752 -115856831 - AluJb SINE Alu -6 306 26 286 284 98 0 chr2 137399944 137400152 -115856431 - L1 LINE L1 -783 5363 5129 1834 160 14 7 chr2 137400154 137400441 -115856142 + AluJb SINE Alu 1 289 -23 540 232 56 25 chr2 137400443 137400641 -115855942 - L1M3 LINE L1 -679 5489 5286 343 200 17 0 chr2 137400714 137400774 -115855809 - AluJ/FRAM SINE Alu -12 290 230 1839 242 48 8 chr2 137400929 137401453 -115855130 - L1MA6 LINE L1 -49 6251 5707 902 20 0 0 chr2 137401453 137401554 -115855029 - AluYb8 SINE Alu -5 313 213 493 298 29 50 chr2 137401565 137401936 -115854647 - L1MA6 LINE L1 -575 5593 5297 203 133 0 0 chr2 137402155 137402185 -115854398 + (GA)n Simple_repeat Simple_repeat 1 30 0 2264 267 53 23 chr2 137402223 137403473 -115853110 - L1PA16 LINE L1 -243 5923 4629 1796 285 24 67 chr2 137403495 137404562 -115852021 - L1MA6 LINE L1 -10 6290 5269 459 331 32 26 chr2 137404892 137405233 -115851350 - L1MA6 LINE L1 -1094 5052 4710 1780 263 55 45 chr2 137405522 137406513 -115850070 - L1MA6 LINE L1 -129 6171 5161 332 288 113 58 chr2 137406705 137406997 -115849586 - L1MA6 LINE L1 -1092 5054 4747 2351 253 41 39 chr2 137407081 137408414 -115848169 - L1PA16 LINE L1 -14 6152 4823 436 285 22 7 chr2 137408748 137408885 -115847698 + MLT1J2 LTR MaLR 30 168 -282 1670 160 32 7 chr2 137410351 137410632 -115845951 + AluJb SINE Alu 1 288 -24 545 221 154 42 chr2 137410644 137410884 -115845699 + L1MC4 LINE L1 7771 8037 -5 2896 197 71 12 chr2 137411334 137411387 -115845196 + L1MA4A LINE L1 4959 5007 -1284 2154 89 43 0 chr2 137411387 137411669 -115844914 + AluSc SINE Alu 1 294 -15 2896 197 71 12 chr2 137411669 137412709 -115843874 + L1MA4A LINE L1 5007 6120 -171 320 171 29 14 chr2 137412717 137412787 -115843796 + L1MA4A LINE L1 6224 6294 -9 270 205 37 0 chr2 137413555 137413624 -115842959 - MIR SINE MIR -91 117 46 236 160 53 13 chr2 137415050 137415125 -115841458 + (GCTTG)n Simple_repeat Simple_repeat 4 81 0 2378 79 0 10 chr2 137416434 137416739 -115839844 + AluY SINE Alu 1 302 -9 2084 129 0 4 chr2 137417342 137417642 -115838941 + AluSg SINE Alu 1 299 0 254 301 75 8 chr2 137417672 137417805 -115838778 + L1ME LINE L1 5495 5636 -485 29 60 0 0 chr2 137418338 137418388 -115838195 + AT_rich Low_complexity Low_complexity 1 50 0 2724 120 13 5 chr2 137418840 137419233 -115837350 + L1PA12 LINE L1 5773 6168 0 440 256 71 18 chr2 137419551 137419719 -115836864 - MER104 DNA MER2_type -1 179 3 647 280 82 39 chr2 137419812 137420044 -115836539 - MIR SINE MIR -1 261 20 833 169 0 0 chr2 137421912 137422036 -115834547 + FLAM_A SINE Alu 1 124 -9 1708 169 30 24 chr2 137423557 137423894 -115832689 + THE1C LTR MaLR 5 343 -32 273 228 0 38 chr2 137423920 137423999 -115832584 + (TA)n Simple_repeat Simple_repeat 1 76 0 4725 201 37 8 chr2 137423999 137425629 -115830954 - L1P5 LINE L1 -363 7229 5547 3153 135 34 12 chr2 137425846 137426342 -115830241 + MER1A DNA MER1_type 18 524 -5 2422 54 0 0 chr2 137426612 137426892 -115829691 + AluY SINE Alu 1 280 -31 7359 188 52 8 chr2 137429273 137430602 -115825981 + L1PA12 LINE L1 617 2004 -5577 373 222 0 0 chr2 137430703 137430775 -115825808 - L1P5 LINE L1 -6244 1330 1259 466 127 0 14 chr2 137430787 137430858 -115825725 - L1P5 LINE L1 -6251 1330 1261 1150 275 108 20 chr2 137430878 137431220 -115825363 + L1PA13 LINE L1 482 853 -5934 2768 193 16 7 chr2 137431239 137431803 -115824780 + L1PA13 LINE L1 2492 3060 -3737 2111 162 56 22 chr2 137431803 137432328 -115824255 + MER4-int LTR ERV1 37 623 -5975 353 128 0 43 chr2 137432439 137432533 -115824050 + (A)n Simple_repeat Simple_repeat 1 90 0 21 36 0 0 chr2 137432541 137432569 -115824014 + AT_rich Low_complexity Low_complexity 1 28 0 6470 96 37 0 chr2 137432573 137433583 -115823000 - L1PA4 LINE L1 -3 6152 5126 1770 120 77 47 chr2 137437116 137437427 -115819156 - AluSp SINE Alu 0 322 3 737 307 52 16 chr2 137437647 137438031 -115818552 - L1MEc LINE L1 -3568 2858 2461 207 0 0 0 chr2 137438071 137438094 -115818489 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 289 228 146 59 chr2 137438110 137438329 -115818254 - L1MEc LINE L1 -4258 2349 2112 375 326 9 32 chr2 137438356 137438577 -115818006 - L1MEc LINE L1 -4503 2017 1708 220 342 77 34 chr2 137438917 137439034 -115817549 - MIR SINE MIR -64 144 23 21 0 0 0 chr2 137439276 137439297 -115817286 + AT_rich Low_complexity Low_complexity 1 21 0 331 283 50 33 chr2 137439854 137440034 -115816549 + HERV16 LTR ERVL 2781 2963 -2033 5008 43 0 2 chr2 137441289 137441909 -115814674 + L1P LINE L1 2516 3134 -3012 2697 152 2 0 chr2 137442358 137442799 -115813784 - L1P LINE L1 -3745 2401 1960 1328 240 16 46 chr2 137442969 137443273 -115813310 - AluJo SINE Alu -6 296 2 1391 181 29 11 chr2 137444264 137444716 -115811867 + L1P4 LINE L1 5026 5480 -686 27 49 0 0 chr2 137444716 137444757 -115811826 + AT_rich Low_complexity Low_complexity 1 41 0 2106 123 0 13 chr2 137444862 137445184 -115811399 + AluSg SINE Alu 1 310 0 1266 271 95 68 chr2 137445230 137447045 -115809538 - L1MCc LINE L1 -4319 2803 727 258 339 53 35 chr2 137447083 137447254 -115809329 - L1MCc LINE L1 -5601 822 649 22 35 0 0 chr2 137447958 137447987 -115808596 + AT_rich Low_complexity Low_complexity 1 29 0 270 81 0 0 chr2 137448654 137448691 -115807892 + (TTCCC)n Simple_repeat Simple_repeat 2 38 0 1435 196 14 11 chr2 137448691 137448977 -115807606 - AluJb SINE Alu -23 289 3 319 292 11 6 chr2 137450718 137450896 -115805687 + (CA)n Simple_repeat Simple_repeat 2 180 0 2038 75 53 3 chr2 137451144 137451426 -115805157 - AluY SINE Alu -15 296 1 341 272 128 119 chr2 137452311 137453082 -115803501 + L1M2 LINE L1 499 1276 -5573 1250 173 4 59 chr2 137453397 137453668 -115802915 - AluJb SINE Alu -52 260 5 368 191 67 43 chr2 137453670 137453796 -115802787 - MLT1B LTR MaLR -219 171 48 680 257 58 0 chr2 137454323 137454494 -115802089 - MIR SINE MIR -66 196 16 214 128 85 0 chr2 137454585 137454632 -115801951 + (TTCA)n Simple_repeat Simple_repeat 4 54 0 2204 127 108 141 chr2 137455753 137456343 -115800240 + LTR4 LTR ERV1 26 596 0 1619 186 9 28 chr2 137456386 137456704 -115799879 - AluJo SINE Alu 0 312 1 348 236 24 57 chr2 137456746 137456869 -115799714 - L1ME4a LINE L1 -3 6118 6000 195 125 0 0 chr2 137456904 137456944 -115799639 + (TG)n Simple_repeat Simple_repeat 1 40 0 279 311 27 47 chr2 137456965 137457113 -115799470 - MIR SINE MIR -1 261 117 354 296 94 49 chr2 137457205 137457303 -115799280 - L1ME4a LINE L1 -249 5872 5780 1948 125 17 3 chr2 137457303 137457590 -115798993 + AluSq SINE Alu 2 292 -21 354 296 94 49 chr2 137457590 137457798 -115798785 - L1ME4a LINE L1 -341 5780 5552 908 175 0 92 chr2 137458718 137458924 -115797659 + MER3 DNA MER1_type 23 209 0 1680 187 3 32 chr2 137459678 137459994 -115796589 - AluJb SINE Alu 0 312 6 2024 154 103 23 chr2 137460322 137460718 -115795865 - MSTA LTR MaLR 0 428 1 1417 230 4 0 chr2 137461451 137461729 -115794854 + AluJb SINE Alu 1 279 -33 295 226 287 0 chr2 137462128 137462243 -115794340 - MIR SINE MIR -97 165 18 522 218 48 36 chr2 137462351 137462516 -115794067 - MLT1L LTR MaLR -27 588 422 210 250 62 73 chr2 137464509 137464605 -115791978 - MIR SINE MIR -122 140 46 * 396 298 130 8 chr2 137464579 137464710 -115791873 + MIR SINE MIR 40 186 -76 4830 204 27 15 chr2 137468351 137469985 -115786598 + L1MA7 LINE L1 4131 5781 -510 2499 213 68 28 chr2 137469979 137470622 -115785961 + L1MB8 LINE L1 5508 6176 -2 * 1982 197 68 28 chr2 137470626 137471129 -115785454 + L1MA7 LINE L1 5769 6291 0 23 33 0 0 chr2 137471544 137471574 -115785009 + AT_rich Low_complexity Low_complexity 1 30 0 296 26 0 0 chr2 137471574 137471613 -115784970 - HY3 scRNA scRNA -1 100 62 238 340 19 0 chr2 137472692 137472795 -115783788 - MLT1K LTR MaLR -348 240 136 1241 257 64 50 chr2 137472796 137473392 -115783191 + L1ME1 LINE L1 5560 6163 -3 1972 130 7 27 chr2 137473689 137473989 -115782594 - AluSq SINE Alu -19 294 1 6666 143 20 20 chr2 137474142 137475744 -115780839 + L1MA1 LINE L1 4687 6293 -9 3071 52 26 4 chr2 137477233 137477677 -115778906 - L1P2 LINE L1 -716 5438 4989 324 0 0 0 chr2 137477681 137477717 -115778866 + (TAA)n Simple_repeat Simple_repeat 1 36 0 901 146 0 29 chr2 137478268 137478405 -115778178 - FLAM_C SINE Alu 0 133 1 21 57 0 0 chr2 137478862 137478897 -115777686 + AT_rich Low_complexity Low_complexity 1 35 0 278 256 90 13 chr2 137479029 137479107 -115777476 - L2 LINE L2 -50 3222 3139 210 154 0 0 chr2 137480049 137480088 -115776495 + T-rich Low_complexity Low_complexity 4 42 0 387 300 96 12 chr2 137480159 137480371 -115776212 + MIR SINE MIR 7 234 -28 624 189 9 9 chr2 137482189 137482295 -115774288 + U6 snRNA snRNA 1 106 -1 240 378 53 0 chr2 137482984 137483135 -115773448 - MIR SINE MIR -47 215 57 3367 165 8 8 chr2 137483520 137484046 -115772537 - MER1A DNA MER1_type -1 526 1 309 192 0 0 chr2 137484278 137484330 -115772253 - MER91B DNA MER1_type -60 130 79 722 270 192 23 chr2 137485309 137485694 -115770889 - MLT1L LTR MaLR -165 450 1 190 290 58 0 chr2 137485700 137485769 -115770814 - L2 LINE L2 -565 2749 2677 920 224 47 47 chr2 137485774 137485988 -115770595 - MER58A DNA MER1_type -3 221 8 1853 136 52 0 chr2 137488065 137488352 -115768231 + AluSc SINE Alu 1 302 -7 2445 83 3 0 chr2 137488986 137489288 -115767295 + AluY SINE Alu 1 303 -8 22 0 0 0 chr2 137489980 137490002 -115766581 + AT_rich Low_complexity Low_complexity 1 22 0 40 67 0 0 chr2 137490346 137490421 -115766162 + AT_rich Low_complexity Low_complexity 1 75 0 193 333 9 45 chr2 137490828 137490939 -115765644 + MIR3 SINE MIR 90 196 -12 2032 147 12 14 chr2 137491334 137491680 -115764903 - L1PA15 LINE L1 0 6165 5821 399 197 0 0 chr2 137492278 137492344 -115764239 - MER58A DNA MER1_type 0 224 159 954 184 0 0 chr2 137492351 137492509 -115764074 - AluJb SINE Alu -23 289 132 466 221 11 11 chr2 137492522 137492617 -115763966 - MER58A DNA MER1_type -9 98 4 2131 298 89 37 chr2 137493204 137493328 -115763255 + L2 LINE L2 1777 1893 -1420 23412 32 1 22 chr2 137493328 137496997 -115759586 - L1PA3 LINE L1 0 6155 2545 2131 298 89 37 chr2 137496997 137497261 -115759322 + L2 LINE L2 1893 2142 -1171 2112 125 0 0 chr2 137497261 137497556 -115759027 - AluSx SINE Alu -17 295 1 2131 298 89 37 chr2 137497556 137498371 -115758212 + L2 LINE L2 2142 3043 -270 310 306 131 45 chr2 137498713 137498981 -115757602 + L2 LINE L2 3023 3313 0 1772 160 3 10 chr2 137499252 137499540 -115757043 - AluSx SINE Alu -26 286 1 21 0 0 0 chr2 137499545 137499566 -115757017 + AT_rich Low_complexity Low_complexity 1 21 0 1936 66 0 4 chr2 137503163 137503404 -115753179 + L1P LINE L1 10 249 -5897 33 0 0 0 chr2 137503509 137503542 -115753041 + AT_rich Low_complexity Low_complexity 1 33 0 189 271 71 47 chr2 137504978 137505063 -115751520 - MIR SINE MIR -120 142 56 228 239 0 43 chr2 137505292 137505384 -115751199 + L1MC4 LINE L1 6615 6702 -1340 * 241 206 0 82 chr2 137505356 137505453 -115751130 - L1MC4 LINE L1 -1340 6702 6614 416 220 0 9 chr2 137505455 137505564 -115751019 + (TA)n Simple_repeat Simple_repeat 2 109 0 305 304 44 29 chr2 137505668 137505872 -115750711 - L1ME LINE L1 -505 5659 5453 2000 148 13 0 chr2 137505872 137506176 -115750407 - AluSx SINE Alu -4 308 1 314 275 0 22 chr2 137506197 137506288 -115750295 - L1MC4 LINE L1 -1340 6702 6614 279 0 0 0 chr2 137506288 137506319 -115750264 + (TA)n Simple_repeat Simple_repeat 2 32 0 518 91 52 0 chr2 137506319 137506396 -115750187 - L1PA7 LINE L1 -15 6139 6059 674 301 139 26 chr2 137506608 137507182 -115749401 + L2 LINE L2 1840 2478 -836 218 205 12 0 chr2 137507186 137507269 -115749314 + CT-rich Low_complexity Low_complexity 2 85 0 348 77 0 0 chr2 137507273 137507325 -115749258 + (CA)n Simple_repeat Simple_repeat 1 52 0 225 0 0 0 chr2 137507886 137507911 -115748672 + (ATTAG)n Simple_repeat Simple_repeat 2 26 0 24 67 0 0 chr2 137508026 137508071 -115748512 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr2 137510136 137510158 -115746425 + AT_rich Low_complexity Low_complexity 1 22 0 2543 137 95 18 chr2 137510497 137510992 -115745591 + TAR1 Satellite telomeric 1525 2057 -54 540 92 5 87 chr2 137511144 137511340 -115745243 + (TTAGGG)n Simple_repeat Simple_repeat 1 180 0 1645 263 2 9 chr2 137511387 137511828 -115744755 - L1ME LINE L1 -927 5219 4782 788 180 0 27 chr2 137512227 137512377 -115744206 - AluSg/x SINE Alu -1 311 166 1484 103 63 22 chr2 137512377 137515906 -115740677 + GSATII Satellite centromeric 1 3676 -32 1259 178 70 30 chr2 137517466 137517736 -115738847 - AluJo SINE Alu -31 281 1 356 213 93 19 chr2 137517936 137518044 -115738539 + MER4C LTR ERV1 4 119 -346 679 235 108 51 chr2 137518174 137518502 -115738081 + LTR34 LTR ERV1 186 510 -154 2412 234 57 31 chr2 137518506 137518649 -115737934 - L1PBb LINE L1 -4500 2349 2211 2056 152 0 0 chr2 137518649 137518946 -115737637 + AluSx SINE Alu 1 297 -15 2412 234 57 31 chr2 137518946 137519661 -115736922 - L1PBb LINE L1 -4638 2211 1414 3931 192 7 36 chr2 137520135 137520889 -115735694 - L1PBb LINE L1 -6116 733 2 624 268 42 5 chr2 137520892 137521105 -115735478 + MER65C-int LTR ERV1 1875 2095 -2776 352 174 9 104 chr2 137521160 137521275 -115735308 + MER65C-int LTR ERV1 4768 4871 0 2186 194 19 26 chr2 137521275 137521739 -115734844 + MER65C LTR ERV1 1 461 0 2255 161 41 14 chr2 137521984 137522400 -115734183 - MSTA LTR MaLR -1 427 1 3917 174 88 23 chr2 137522400 137523191 -115733392 - MSTA-int LTR MaLR 0 1651 809 1025 259 93 42 chr2 137524561 137524777 -115731806 - L1M4 LINE L1 -2130 4016 3812 837 218 0 12 chr2 137524777 137524942 -115731641 - FRAM SINE Alu -3 163 1 1025 259 93 42 chr2 137524942 137525316 -115731267 - L1M4 LINE L1 -2334 3812 3396 478 154 346 0 chr2 137526893 137527023 -115729560 + L1PBa LINE L1 989 1163 -5700 11669 198 19 67 chr2 137527040 137530888 -115725695 + L1PBa LINE L1 1332 5363 -1499 225 0 0 0 chr2 137530888 137530913 -115725670 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 11669 198 19 67 chr2 137530913 137530993 -115725590 + L1PBa LINE L1 5363 5445 -1417 1104 169 0 0 chr2 137530993 137531171 -115725412 + AluSp SINE Alu 136 313 0 11669 198 19 67 chr2 137531171 137531730 -115724853 + L1PBa LINE L1 5445 5750 -1112 944 88 0 0 chr2 137531833 137531958 -115724625 + L1P LINE L1 399 523 -5623 2201 176 62 0 chr2 137533761 137534148 -115722435 + MSTA LTR MaLR 18 428 0 1101 93 19 0 chr2 137534148 137534310 -115722273 + MSTA-int LTR MaLR 1 165 -1486 366 221 0 26 chr2 137534305 137534382 -115722201 + MSTA-int LTR MaLR 289 363 -1288 * 8744 50 0 0 chr2 137534363 137535499 -115721084 - L1P LINE L1 -4176 1970 707 7925 18 3 0 chr2 137535499 137536527 -115720056 + L1PA2 LINE L1 5125 6155 0 2866 221 30 3 chr2 137536527 137537103 -115719480 + MSTA-int LTR MaLR 341 931 -720 2267 179 58 16 chr2 137537107 137537599 -115718984 + TAR1 Satellite telomeric 1 512 -41 2512 175 173 6 chr2 137537756 137538298 -115718285 - MSTA-int LTR MaLR -1018 633 1 2201 145 58 18 chr2 137538298 137538692 -115717891 - MSTA LTR MaLR 0 428 19 1577 168 35 14 chr2 137539590 137539876 -115716707 - AluJo SINE Alu -20 292 1 21 36 0 0 chr2 137540271 137540299 -115716284 + AT_rich Low_complexity Low_complexity 1 28 0 29 0 0 0 chr2 137540446 137540475 -115716108 + AT_rich Low_complexity Low_complexity 1 29 0 1609 226 11 17 chr2 137540714 137541073 -115715510 - MER4D LTR ERV1 0 903 547 677 209 14 10 chr2 137541071 137541255 -115715328 - MER4E LTR ERV1 -388 395 1 * 343 162 15 15 chr2 137541879 137541947 -115714636 - MSTA LTR MaLR 0 428 361 869 107 0 0 chr2 137541947 137542059 -115714524 + AluSg SINE Alu 23 134 -176 249 276 23 0 chr2 137542099 137542186 -115714397 + L1MC4 LINE L1 6614 6702 -1340 249 247 0 41 chr2 137542158 137542255 -115714328 - L1MC4 LINE L1 -1340 6702 6610 246 230 46 11 chr2 137542231 137542318 -115714265 + L1MC4 LINE L1 6614 6703 -1339 * 307 160 27 0 chr2 137542319 137542394 -115714189 + (TA)n Simple_repeat Simple_repeat 2 78 0 2080 110 4 0 chr2 137542395 137542676 -115713907 - AluSq SINE Alu -31 282 1 211 319 14 0 chr2 137542730 137542799 -115713784 + L2 LINE L2 3242 3311 -2 1329 126 56 5 chr2 137543316 137543530 -115713053 - MER61E LTR ERV1 -4 565 341 232 245 20 92 chr2 137543582 137543680 -115712903 - MER61E LTR ERV1 -380 189 99 * 425 239 35 9 chr2 137543677 137543790 -115712793 - LTR25 LTR ERV1 -431 363 248 1846 126 8 0 chr2 137544371 137544626 -115711957 - AluSx SINE Alu -15 297 41 1021 234 30 48 chr2 137544801 137545135 -115711448 + MER89-int LTR ERV1 1030 1357 -5444 1587 221 24 9 chr2 137545135 137545470 -115711113 + MLT1A1 LTR MaLR 1 340 -25 865 241 46 59 chr2 137545471 137545795 -115710788 + MER89-int LTR ERV1 1340 1659 -5142 1804 122 3 84 chr2 137547097 137547418 -115709165 - AluSg SINE Alu -15 295 1 1593 181 164 11 chr2 137551913 137552278 -115704305 + MSTA LTR MaLR 1 421 -7 203 324 24 15 chr2 137558568 137558675 -115697908 + MIR SINE MIR 53 160 -48 830 247 136 8 chr2 137558675 137558926 -115697657 - MER102a DNA MER1_type -5 325 43 1697 157 10 27 chr2 137559616 137559916 -115696667 + AluJo SINE Alu 7 301 -11 766 231 6 22 chr2 137560031 137560213 -115696370 + L1MB8 LINE L1 5998 6176 -2 3373 238 78 29 chr2 137560353 137561383 -115695200 + L1MEc LINE L1 1734 2815 -3400 1693 181 14 7 chr2 137561383 137561670 -115694913 + AluJo SINE Alu 1 289 -23 3373 238 78 29 chr2 137561670 137562206 -115694377 + L1MEc LINE L1 2815 3323 -2892 393 234 50 14 chr2 137562213 137562354 -115694229 + L1MEc LINE L1 3959 4104 -2111 383 281 110 95 chr2 137562773 137563944 -115692639 + L1M2 LINE L1 591 1386 -5463 388 291 110 102 chr2 137564374 137565262 -115691321 + L1M2 LINE L1 635 1407 -5442 2101 154 35 22 chr2 137565793 137566163 -115690420 - THE1C LTR MaLR 0 375 1 352 343 41 14 chr2 137566168 137566314 -115690269 - MLT1K LTR MaLR -425 163 14 1949 162 0 10 chr2 137566369 137566677 -115689906 + AluJb SINE Alu 1 305 -7 201 254 0 0 chr2 137566783 137566842 -115689741 + (TA)n Simple_repeat Simple_repeat 1 59 0 321 368 54 25 chr2 137567430 137567634 -115688949 - L3 LINE CR1 -9 1568 1359 199 159 200 0 chr2 137568155 137568218 -115688365 - MIR SINE MIR -63 145 80 2361 86 3 0 chr2 137568631 137568932 -115687651 - AluY SINE Alu -9 302 1 3176 126 45 10 chr2 137569055 137569329 -115687254 - Tigger3(Golem) DNA MER2_type 0 3028 2765 1965 121 59 0 chr2 137569329 137569619 -115686964 + AluSx SINE Alu 1 307 -5 3176 126 45 10 chr2 137569619 137569860 -115686723 - Tigger3(Golem) DNA MER2_type -263 2765 2495 1240 128 0 21 chr2 137571894 137572082 -115684501 + THE1C LTR MaLR 1 184 -191 983 89 0 0 chr2 137572083 137572206 -115684377 + L1MA3 LINE L1 6183 6305 0 23 0 0 0 chr2 137572206 137572229 -115684354 + AT_rich Low_complexity Low_complexity 1 23 0 700 237 104 0 chr2 137572858 137573069 -115683514 + L1MC4 LINE L1 7669 7901 -141 21 36 0 0 chr2 137573102 137573130 -115683453 + AT_rich Low_complexity Low_complexity 1 28 0 489 303 68 58 chr2 137573138 137573726 -115682857 + HAL1b LINE L1 66 659 -689 2137 170 20 33 chr2 137573832 137574226 -115682357 - MLT1B LTR MaLR 0 390 2 1982 276 77 50 chr2 137574451 137575402 -115681181 + L2 LINE L2 2023 2998 -315 454 221 91 72 chr2 137575410 137575618 -115680965 + L2 LINE L2 3102 3313 0 994 274 114 45 chr2 137576019 137576814 -115679769 - L1MEc LINE L1 -4771 1625 776 505 305 25 20 chr2 137576855 137577055 -115679528 - L1MEc LINE L1 -5867 338 138 21 0 0 0 chr2 137577263 137577284 -115679299 + AT_rich Low_complexity Low_complexity 1 21 0 27 49 0 0 chr2 137578045 137578086 -115678497 + AT_rich Low_complexity Low_complexity 1 41 0 255 267 0 13 chr2 137578561 137578636 -115677947 + ERVL LTR ERVL 4953 5026 -738 255 125 0 0 chr2 137579224 137579264 -115677319 + (T)n Simple_repeat Simple_repeat 1 40 0 248 241 19 0 chr2 137579334 137579388 -115677195 + LTR16C LTR ERVL 171 225 -266 313 151 0 0 chr2 137579511 137579564 -115677019 - L1MA9 LINE L1 0 6312 6260 345 24 0 0 chr2 137580437 137580479 -115676104 + (TC)n Simple_repeat Simple_repeat 2 43 0 339 25 0 0 chr2 137580484 137580524 -115676059 + (TG)n Simple_repeat Simple_repeat 1 40 0 23 33 0 0 chr2 137580966 137580996 -115675587 + AT_rich Low_complexity Low_complexity 1 30 0 21 57 0 0 chr2 137581094 137581129 -115675454 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr2 137581643 137581671 -115674912 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 137581692 137581713 -115674870 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr2 137581841 137581876 -115674707 + AT_rich Low_complexity Low_complexity 1 35 0 488 209 47 132 chr2 137582723 137582958 -115673625 - MER58C DNA MER1_type 0 215 1 1044 275 158 20 chr2 137583272 137583846 -115672737 + L2 LINE L2 2536 3187 -126 23 0 0 0 chr2 137584277 137584300 -115672283 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 137584862 137584890 -115671693 + AT_rich Low_complexity Low_complexity 1 28 0 2378 103 0 0 chr2 137585344 137585691 -115670892 + AluSx SINE Alu 1 347 0 442 275 47 18 chr2 137586347 137586518 -115670065 + MIR SINE MIR 74 249 -13 224 257 20 79 chr2 137586619 137586720 -115669863 - L2 LINE L2 -1 3271 3177 243 0 0 0 chr2 137587012 137587039 -115669544 + (A)n Simple_repeat Simple_repeat 1 27 0 213 328 66 0 chr2 137589592 137589653 -115666930 + L2 LINE L2 3246 3310 -3 411 282 60 60 chr2 137590452 137590736 -115665847 - MARNA DNA Mariner -270 316 33 452 249 203 20 chr2 137590776 137590973 -115665610 - MIR SINE MIR 0 262 30 317 222 81 20 chr2 137590960 137591059 -115665524 + MIR SINE MIR 158 262 0 * 228 238 0 0 chr2 137592172 137592214 -115664369 + (CA)n Simple_repeat Simple_repeat 2 43 0 21 36 0 0 chr2 137592827 137592855 -115663728 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr2 137593244 137593267 -115663316 + AT_rich Low_complexity Low_complexity 1 23 0 205 138 0 0 chr2 137593728 137593757 -115662826 + (CGG)n Simple_repeat Simple_repeat 2 30 0 332 253 115 108 chr2 137593799 137594068 -115662515 + L1M2 LINE L1 639 909 -5940 23 0 0 0 chr2 137595811 137595834 -115660749 + AT_rich Low_complexity Low_complexity 1 23 0 3496 199 24 76 chr2 137595889 137596912 -115659671 - LTR5 LTR ERVK 0 969 1 211 320 135 19 chr2 137596966 137597122 -115659461 + L3 LINE CR1 220 393 -1184 287 345 21 14 chr2 137597387 137597529 -115659054 + L3 LINE CR1 981 1123 -454 15144 159 49 14 chr2 137597568 137601477 -115655106 + L1M1 LINE L1 1057 5101 -2464 21 0 0 0 chr2 137601477 137601498 -115655085 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 137602514 137602535 -115654048 + AT_rich Low_complexity Low_complexity 1 21 0 234 288 102 17 chr2 137602676 137602794 -115653789 + HAL1b LINE L1 1221 1348 0 1150 48 0 7 chr2 137603100 137603246 -115653337 - AluY SINE Alu -16 295 151 465 286 33 50 chr2 137603272 137603454 -115653129 - L2 LINE L2 -1 3312 3134 186 390 0 0 chr2 137603876 137603935 -115652648 + MIR SINE MIR 91 149 -113 2246 77 42 0 chr2 137604192 137604479 -115652104 + AluSx SINE Alu 1 299 -13 23 86 0 0 chr2 137605779 137605837 -115650746 + AT_rich Low_complexity Low_complexity 1 58 0 21 0 0 0 chr2 137608237 137608258 -115648325 + AT_rich Low_complexity Low_complexity 1 21 0 480 244 93 86 chr2 137608354 137608614 -115647969 - MIR SINE MIR 0 262 21 240 318 59 41 chr2 137608626 137608785 -115647798 + L2 LINE L2 2890 3054 -218 1715 166 11 3 chr2 137608785 137609069 -115647514 + AluSx SINE Alu 27 312 0 370 319 103 3 chr2 137609139 137609297 -115647286 + MIR SINE MIR 16 184 -76 677 93 9 0 chr2 137609772 137609879 -115646704 + (TCTA)n Simple_repeat Simple_repeat 3 110 0 2043 126 7 0 chr2 137610871 137611157 -115645426 + AluSx SINE Alu 2 289 -23 311 260 21 10 chr2 137611971 137612067 -115644516 + MLT1J LTR MaLR 415 511 0 1644 122 0 4 chr2 137612566 137612795 -115643788 + MER46A DNA MER2_type 6 233 -3 232 365 184 32 chr2 137613072 137613349 -115643234 - L2 LINE L2 -2807 507 189 698 127 0 9 chr2 137614059 137614169 -115642414 + MER46A DNA MER2_type 125 233 -3 2251 201 49 0 chr2 137614287 137614739 -115641844 - L1 LINE L1 -1924 4222 3749 303 181 22 13 chr2 137614741 137614767 -115641816 + MER4A LTR ERV1 381 405 -259 189 0 0 0 chr2 137614767 137614788 -115641795 + (TA)n Simple_repeat Simple_repeat 2 22 0 7755 35 8 2 chr2 137614788 137616002 -115640581 - L1PA4 LINE L1 -7 6148 4929 303 181 22 13 chr2 137616002 137616058 -115640525 + MER4A LTR ERV1 404 662 -2 4816 170 8 35 chr2 137616058 137617111 -115639472 + L1PA15 LINE L1 4734 5755 -410 1869 170 0 0 chr2 137617111 137617405 -115639178 + AluSx SINE Alu 3 296 -16 4816 170 8 35 chr2 137617405 137617806 -115638777 + L1PA15 LINE L1 5755 6165 0 329 238 49 0 chr2 137617806 137617928 -115638655 + L1M4 LINE L1 2818 2945 -3201 2093 134 0 0 chr2 137618063 137618361 -115638222 + AluSg SINE Alu 1 298 -12 318 304 57 16 chr2 137618802 137618996 -115637587 + L1M4 LINE L1 5194 5395 -751 25 0 0 0 chr2 137619270 137619295 -115637288 + AT_rich Low_complexity Low_complexity 1 25 0 4779 99 42 10 chr2 137621339 137622046 -115634537 + L1MA1 LINE L1 5573 6302 0 15928 22 5 0 chr2 137622315 137624857 -115631726 - L1PA2 LINE L1 0 6155 3634 1993 84 0 0 chr2 137628152 137628415 -115628168 + L1PA8A LINE L1 5690 5952 -179 2630 257 36 44 chr2 137629093 137629424 -115627159 + L1MA6 LINE L1 5222 5554 -746 2501 66 3 0 chr2 137629424 137629725 -115626858 + AluY SINE Alu 1 302 -9 2630 257 36 44 chr2 137629725 137630476 -115626107 + L1MA6 LINE L1 5554 6295 -5 1702 250 58 23 chr2 137630495 137631418 -115625165 + L1P4 LINE L1 4643 5601 -565 2742 257 31 29 chr2 137631419 137632315 -115624268 + L1MA6 LINE L1 5394 6291 -9 1741 246 60 66 chr2 137632324 137633913 -115622670 + L1MA6 LINE L1 4624 6284 -16 580 236 117 53 chr2 137633921 137634332 -115622251 + L1 LINE L1 4618 5054 -1092 674 244 36 80 chr2 137634446 137634842 -115621741 + L1P4 LINE L1 5088 5440 -726 1995 132 13 0 chr2 137634842 137635145 -115621438 + AluSx SINE Alu 1 307 -5 674 244 36 80 chr2 137635145 137635306 -115621277 + L1P4 LINE L1 5440 5607 -559 2313 53 0 3 chr2 137636399 137636699 -115619884 - L1P LINE L1 -2643 3503 3205 192 77 0 0 chr2 137638131 137638157 -115618426 + (CCTTG)n Simple_repeat Simple_repeat 1 26 0 22 0 0 0 chr2 137641023 137641045 -115615538 + GC_rich Low_complexity Low_complexity 1 22 0 204 273 18 0 chr2 137643082 137643137 -115613446 + CT-rich Low_complexity Low_complexity 3 58 0 359 261 21 9 chr2 137643530 137643680 -115612903 - MIR SINE MIR -56 206 54 313 330 10 0 chr2 137643905 137644005 -115612578 - MLT1I LTR MaLR -141 268 168 341 280 87 20 chr2 137644324 137644632 -115611951 + MLT1I LTR MaLR 4 406 -3 516 319 35 4 chr2 137644696 137644928 -115611655 + L1MC4a LINE L1 5625 5863 -1945 27 0 0 0 chr2 137644982 137645009 -115611574 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr2 137645051 137645072 -115611511 + AT_rich Low_complexity Low_complexity 1 21 0 1187 237 56 60 chr2 137645107 137645571 -115611012 - MLT1C LTR MaLR 0 467 6 5602 123 42 1 chr2 137645686 137646583 -115610000 + L1PA16 LINE L1 5225 6157 -9 1439 110 0 0 chr2 137646654 137646845 -115609738 - AluSx SINE Alu -121 191 1 284 102 0 0 chr2 137646848 137646897 -115609686 + Tigger3(Golem) DNA MER2_type 2744 2792 -237 4545 178 46 39 chr2 137647028 137648378 -115608205 + L1MA6 LINE L1 4916 6273 -27 1437 84 0 11 chr2 137648386 137648577 -115608006 + AluY SINE Alu 110 298 -13 228 35 0 0 chr2 137648577 137648606 -115607977 + (TTAA)n Simple_repeat Simple_repeat 3 31 0 1021 256 44 144 chr2 137648650 137649377 -115607206 + L1MD2 LINE L1 5259 5912 -447 800 269 12 0 chr2 137649545 137649716 -115606867 + MER45A DNA AcHobo 2 174 -4 22 0 0 0 chr2 137650307 137650329 -115606254 + AT_rich Low_complexity Low_complexity 1 22 0 1218 305 39 25 chr2 137652021 137652509 -115604074 - L1MC4a LINE L1 -1918 5890 5396 2015 121 0 0 chr2 137652597 137652886 -115603697 - L1PA13 LINE L1 0 6163 5875 305 267 98 91 chr2 137653323 137653630 -115602953 + L1ME LINE L1 3754 4062 -2084 22 35 0 0 chr2 137653702 137653731 -115602852 + AT_rich Low_complexity Low_complexity 1 29 0 485 224 134 101 chr2 137653843 137653911 -115602672 + MER5A DNA MER1_type 4 68 -121 2228 82 31 10 chr2 137653911 137654205 -115602378 + AluY SINE Alu 10 309 -2 485 224 134 101 chr2 137654205 137654315 -115602268 + MER5A DNA MER1_type 68 188 -1 315 312 89 52 chr2 137654567 137654948 -115601635 + L1ME LINE L1 5352 5746 -375 1772 236 65 19 chr2 137655780 137656300 -115600283 - L1MC4a LINE L1 -1063 5083 4540 349 244 23 0 chr2 137656333 137656419 -115600164 - L1MC4a LINE L1 -1833 4313 4226 2199 155 28 25 chr2 137656419 137656780 -115599803 - THE1B LTR MaLR -2 362 1 9317 102 123 20 chr2 137656789 137657935 -115598648 - THE1B-int LTR MaLR -6 1574 250 2267 75 38 0 chr2 137657935 137658227 -115598356 + AluY SINE Alu 1 303 -8 9317 102 123 20 chr2 137658227 137658506 -115598077 - THE1B-int LTR MaLR -1330 250 1 2255 140 36 36 chr2 137658506 137658870 -115597713 - THE1B LTR MaLR 0 364 1 25 0 0 0 chr2 137659936 137659961 -115596622 + AT_rich Low_complexity Low_complexity 1 25 0 333 0 0 0 chr2 137660918 137660955 -115595628 + (CA)n Simple_repeat Simple_repeat 2 38 0 180 0 0 0 chr2 137662908 137662928 -115593655 + (CA)n Simple_repeat Simple_repeat 1 20 0 22 35 0 0 chr2 137663657 137663686 -115592897 + AT_rich Low_complexity Low_complexity 1 29 0 29 0 0 0 chr2 137663710 137663739 -115592844 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr2 137663798 137663823 -115592760 + AT_rich Low_complexity Low_complexity 1 25 0 186 359 142 0 chr2 137663913 137664019 -115592564 - MIR SINE MIR -125 137 17 21 0 0 0 chr2 137665005 137665026 -115591557 + AT_rich Low_complexity Low_complexity 1 21 0 27 29 0 0 chr2 137715544 137715578 -115541005 + AT_rich Low_complexity Low_complexity 1 34 0 1754 134 7 34 chr2 137715779 137716071 -115540512 + AluSx SINE Alu 11 294 -18 3196 72 5 2 chr2 137716461 137716894 -115539689 + L1PA8 LINE L1 5734 6167 -5 1635 126 4 0 chr2 137716894 137717124 -115539459 + AluSx SINE Alu 60 290 -22 189 0 0 0 chr2 137717677 137717698 -115538885 + (TG)n Simple_repeat Simple_repeat 2 22 0 1538 199 28 89 chr2 137719026 137719462 -115537121 - MLT2D LTR ERVL -5 409 1 2532 122 6 0 chr2 137719825 137720187 -115536396 - THE1B LTR MaLR 0 364 1 186 118 0 0 chr2 137720356 137720390 -115536193 + (TC)n Simple_repeat Simple_repeat 1 34 0 5886 94 23 23 chr2 137720703 137721551 -115535032 + L1PA10 LINE L1 4472 5319 -849 2200 109 0 0 chr2 137721551 137721845 -115534738 + AluSg1 SINE Alu 1 294 -15 5886 94 23 23 chr2 137721845 137722685 -115533898 + L1PA10 LINE L1 5318 6168 0 37 0 0 0 chr2 137723047 137723084 -115533499 + AT_rich Low_complexity Low_complexity 1 37 0 25 83 0 0 chr2 137723254 137723314 -115533269 + AT_rich Low_complexity Low_complexity 1 60 0 398 301 115 0 chr2 137723569 137723725 -115532858 - MIR SINE MIR -3 259 86 2629 42 3 3 chr2 137723985 137724294 -115532289 + AluY SINE Alu 1 309 -2 204 315 0 0 chr2 137724555 137724609 -115531974 + MIR SINE MIR 203 256 -6 27 0 0 0 chr2 137725098 137725125 -115531458 + AT_rich Low_complexity Low_complexity 1 27 0 2351 67 0 0 chr2 137725125 137725409 -115531174 - AluY SINE Alu -27 284 1 249 276 76 38 chr2 137726506 137726611 -115529972 + MIR SINE MIR 48 156 -106 318 223 26 129 chr2 137726974 137727131 -115529452 - MER5B DNA MER1_type -43 135 5 1806 197 51 38 chr2 137727222 137727613 -115528970 + MSTD LTR MaLR 1 396 0 212 171 0 0 chr2 137727734 137727769 -115528814 + (CAA)n Simple_repeat Simple_repeat 2 36 0 351 0 0 0 chr2 137728372 137728411 -115528172 + (TG)n Simple_repeat Simple_repeat 2 40 0 21 89 0 0 chr2 137728896 137728952 -115527631 + AT_rich Low_complexity Low_complexity 1 56 0 4152 169 29 40 chr2 137729494 137729701 -115526882 + L1MA8 LINE L1 5114 5322 -969 1972 132 11 0 chr2 137729701 137730022 -115526561 + AluSq SINE Alu 1 324 0 4152 169 29 40 chr2 137730022 137730833 -115525750 + L1MA8 LINE L1 5322 6119 -172 292 168 81 14 chr2 137730959 137731032 -115525551 - L1P4 LINE L1 -403 5758 5676 2516 73 0 0 chr2 137731049 137731351 -115525232 + AluY SINE Alu 1 302 -9 488 304 54 63 chr2 137731351 137731686 -115524897 + MLT1H1 LTR MaLR 20 351 -204 7116 192 8 40 chr2 137731708 137732163 -115524420 + L1PA14 LINE L1 3409 3877 -2269 2045 137 3 3 chr2 137732163 137732470 -115524113 + AluSc SINE Alu 1 307 -2 7116 192 8 40 chr2 137732470 137732954 -115523629 + L1PA14 LINE L1 3877 4375 -1771 1813 177 3 0 chr2 137732954 137733248 -115523335 + AluJb SINE Alu 2 296 -16 7116 192 8 40 chr2 137733248 137733870 -115522713 + L1PA14 LINE L1 4375 4921 -1225 4738 69 15 3 chr2 137733871 137734888 -115521695 - MER11A LTR ERVK 0 1266 1 4650 142 14 25 chr2 137734895 137736026 -115520557 + L1PA14 LINE L1 4924 6038 -123 1376 81 6 0 chr2 137736026 137736198 -115520385 - AluY SINE Alu -137 174 2 1820 287 92 69 chr2 137736599 137737747 -115518836 + L1MCc LINE L1 19 1192 -5231 848 241 31 68 chr2 137737748 137737913 -115518670 + L1MCc LINE L1 2861 3031 -3910 2567 51 0 3 chr2 137737913 137738225 -115518358 + AluY SINE Alu 1 311 0 848 241 31 68 chr2 137738225 137738547 -115518036 + L1MCc LINE L1 3031 3292 -3649 1748 231 34 30 chr2 137738548 137738759 -115517824 - L1M4 LINE L1 -774 5372 5163 2236 118 0 7 chr2 137738759 137739063 -115517520 + AluSx SINE Alu 1 302 -10 2142 91 16 32 chr2 137739068 137739376 -115517207 + AluSc SINE Alu 6 308 -1 1748 231 34 30 chr2 137739376 137739726 -115516857 - L1M4 LINE L1 -986 5160 4803 3442 180 70 9 chr2 137739728 137740106 -115516477 + L1MB3 LINE L1 5401 5755 -428 279 0 0 0 chr2 137740106 137740137 -115516446 + (TA)n Simple_repeat Simple_repeat 1 31 0 3442 180 70 9 chr2 137740137 137740496 -115516087 + L1MB3 LINE L1 5755 6183 0 2110 120 15 6 chr2 137740555 137740897 -115515686 + L1PB1 LINE L1 5804 6148 -3 23 0 0 0 chr2 137740897 137740920 -115515663 + AT_rich Low_complexity Low_complexity 1 23 0 759 124 0 0 chr2 137741354 137741459 -115515124 + AluSg/x SINE Alu 180 314 0 229 67 0 0 chr2 137741459 137741489 -115515094 + (TAAA)n Simple_repeat Simple_repeat 2 156 0 1900 125 7 11 chr2 137741511 137741792 -115514791 + AluSx SINE Alu 1 280 -32 222 37 0 0 chr2 137741795 137741822 -115514761 + (TAA)n Simple_repeat Simple_repeat 2 28 0 31 68 0 0 chr2 137742887 137742946 -115513637 + AT_rich Low_complexity Low_complexity 1 59 0 393 22 0 0 chr2 137744410 137744456 -115512127 + (CA)n Simple_repeat Simple_repeat 1 46 0 2048 121 0 0 chr2 137745952 137746328 -115510255 - AluSq SINE Alu 0 378 3 309 186 29 0 chr2 137746334 137746404 -115510179 - MLT1D LTR MaLR -2 503 432 * 1171 305 44 35 chr2 137746403 137746885 -115509698 - MLT1E2 LTR MaLR -140 486 1 2024 94 22 4 chr2 137746933 137747247 -115509336 - AluY SINE Alu 0 319 1 429 261 123 15 chr2 137748255 137748523 -115508060 + HAL1 LINE L1 971 1267 -1240 * 843 225 50 156 chr2 137748509 137749317 -115507266 + HAL1 LINE L1 1032 1753 -754 219 320 8 56 chr2 137749369 137749494 -115507089 - L2 LINE L2 0 3313 3195 306 308 149 23 chr2 137749542 137749756 -115506827 + HAL1 LINE L1 2267 2507 0 250 169 0 77 chr2 137749809 137749874 -115506709 + GA-rich Low_complexity Low_complexity 1 60 0 326 127 0 36 chr2 137750055 137750110 -115506473 - MER39 LTR ERV1 0 707 655 386 331 145 0 chr2 137750568 137750734 -115505849 - MIR SINE MIR -34 228 39 24 67 0 0 chr2 137750816 137750861 -115505722 + AT_rich Low_complexity Low_complexity 1 45 0 516 354 144 27 chr2 137750869 137751611 -115504972 - L3 LINE CR1 -97 1480 652 37 0 0 0 chr2 137751837 137751874 -115504709 + AT_rich Low_complexity Low_complexity 1 37 0 238 384 87 0 chr2 137751881 137752066 -115504517 - L3 LINE CR1 -1050 527 327 201 39 0 0 chr2 137752254 137752280 -115504303 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 2313 61 0 0 chr2 137752283 137752562 -115504021 - AluY SINE Alu -32 279 1 973 289 151 29 chr2 137752711 137753612 -115502971 + HAL1b LINE L1 233 1243 -105 2091 173 35 27 chr2 137753615 137754160 -115502423 - MLT2A2 LTR ERVL -3 551 1 503 333 60 40 chr2 137754381 137754780 -115501803 + LTR33 LTR ERVL 1 407 -114 26 0 0 0 chr2 137754846 137754872 -115501711 + AT_rich Low_complexity Low_complexity 1 26 0 1974 154 0 0 chr2 137756866 137757178 -115499405 - AluSx SINE Alu 0 312 1 1984 121 18 0 chr2 137757533 137757815 -115498768 + AluY SINE Alu 1 287 -24 329 239 209 22 chr2 137758238 137758372 -115498211 + MER67B LTR ERV1 1 159 -502 2773 161 60 41 chr2 137758372 137759051 -115497532 + LTR1B LTR ERV1 1 697 -88 398 213 123 0 chr2 137759061 137759183 -115497400 - MER67B LTR ERV1 -358 277 60 614 125 19 19 chr2 137759183 137759287 -115497296 - LTR1B LTR ERV1 0 826 723 1390 74 0 0 chr2 137759287 137759463 -115497120 + AluY SINE Alu 136 311 0 12592 197 15 5 chr2 137759481 137762937 -115493646 + L1PB1 LINE L1 2420 5907 -244 1123 149 31 0 chr2 137762939 137763133 -115493450 + L1PB1 LINE L1 5951 6150 -1 519 212 47 47 chr2 137763387 137763600 -115492983 - MER58 DNA MER1_type 0 2420 1 1883 163 32 16 chr2 137763737 137764106 -115492477 - THE1C LTR MaLR 0 375 1 1488 270 32 13 chr2 137764590 137765146 -115491437 + L1MC3 LINE L1 3813 4379 -1767 6584 222 76 48 chr2 137765166 137765395 -115491188 + L1MC3 LINE L1 4551 4772 -3013 369 0 0 0 chr2 137765395 137765436 -115491147 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 6584 222 76 48 chr2 137765436 137767856 -115488727 + L1MC3 LINE L1 4772 7277 -508 588 206 66 0 chr2 137767852 137767988 -115488595 + L1MA9 LINE L1 6130 6274 -38 * 817 210 44 6 chr2 137767993 137768174 -115488409 + L1MC3 LINE L1 7270 7457 -328 2169 117 23 14 chr2 137768174 137768526 -115488057 - THE1A LTR MaLR 0 355 1 10556 100 9 49 chr2 137768526 137770159 -115486424 - THE1A-int LTR MaLR 0 1580 14 408 41 0 0 chr2 137770159 137770208 -115486375 - THE1A LTR MaLR -306 49 1 1116 219 61 17 chr2 137770208 137770505 -115486078 + L1MC3 LINE L1 7453 7762 -23 2192 143 43 3 chr2 137770569 137770730 -115485853 - L1M1 LINE L1 -527 5773 5620 2134 117 0 0 chr2 137770730 137771013 -115485570 - AluSx SINE Alu -9 303 21 261 0 0 0 chr2 137771016 137771045 -115485538 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2192 143 43 3 chr2 137771045 137771270 -115485313 - L1M1 LINE L1 -681 5619 5367 2158 150 132 5 chr2 137771267 137771708 -115484875 + L1MA4 LINE L1 5801 6297 -3 * 1966 151 0 22 chr2 137773070 137773388 -115483195 - AluSx SINE Alu -1 311 1 779 225 81 18 chr2 137773629 137773851 -115482732 + MER46A DNA MER2_type 1 236 0 489 271 47 65 chr2 137773963 137774177 -115482406 + MIR SINE MIR 36 245 -17 282 143 0 0 chr2 137774177 137774226 -115482357 + (TG)n Simple_repeat Simple_repeat 1 49 0 24 0 0 0 chr2 137774238 137774262 -115482321 + AT_rich Low_complexity Low_complexity 1 24 0 2103 112 0 3 chr2 137774348 137774635 -115481948 + AluSq SINE Alu 1 286 -27 4051 193 32 19 chr2 137775213 137776782 -115479801 + L1MB1 LINE L1 4545 6123 -45 24 77 0 0 chr2 137776837 137776889 -115479694 + AT_rich Low_complexity Low_complexity 1 52 0 2438 60 0 3 chr2 137776908 137777210 -115479373 - AluY SINE Alu -10 301 1 21 71 0 0 chr2 137778147 137778189 -115478394 + AT_rich Low_complexity Low_complexity 1 42 0 21 57 0 0 chr2 137778484 137778519 -115478064 + AT_rich Low_complexity Low_complexity 1 35 0 24 53 0 0 chr2 137778998 137779036 -115477547 + AT_rich Low_complexity Low_complexity 1 38 0 2095 137 89 8 chr2 137779134 137779506 -115477077 - MSTA LTR MaLR 0 428 27 2393 163 20 2 chr2 137779531 137779929 -115476654 - MSTA-int LTR MaLR 0 1651 1247 801 139 17 6 chr2 137780036 137780209 -115476374 + CT-rich Low_complexity Low_complexity 3 177 0 227 348 39 61 chr2 137780300 137780481 -115476102 - L2 LINE L2 0 3272 3096 192 97 0 0 chr2 137780784 137780815 -115475768 + (TA)n Simple_repeat Simple_repeat 1 31 0 5569 236 58 32 chr2 137780815 137782850 -115473733 - L1M4 LINE L1 -1360 4786 2700 411 266 9 0 chr2 137782905 137783018 -115473565 - L1M4 LINE L1 -3553 2593 2480 2676 188 4 16 chr2 137783045 137783561 -115473022 - L1MA4 LINE L1 -171 6129 5620 645 201 13 19 chr2 137783702 137783856 -115472727 + L1M4 LINE L1 6 158 -6384 9766 197 41 27 chr2 137783891 137784668 -115471915 - L1MA4 LINE L1 -733 5567 4803 2002 112 18 4 chr2 137784668 137784973 -115471610 - AluSg SINE Alu 0 309 1 9766 197 41 27 chr2 137784973 137787017 -115469566 - L1MA4 LINE L1 -1497 4803 2131 524 271 54 0 chr2 137787129 137787295 -115469288 - L1MB4 LINE L1 0 6180 6006 616 196 71 24 chr2 137787315 137787483 -115469100 - L1M4 LINE L1 -1281 4865 4690 3013 243 66 11 chr2 137787495 137788144 -115468439 - L1MB4 LINE L1 -180 6000 5388 1949 129 0 0 chr2 137788144 137788423 -115468160 - AluSq SINE Alu -32 281 3 3013 243 66 11 chr2 137788423 137789344 -115467239 - L1MB4 LINE L1 -792 5388 4358 1104 266 19 13 chr2 137789343 137789715 -115466868 - L1MB4 LINE L1 -2413 3733 3360 * 23 0 0 0 chr2 137789790 137789813 -115466770 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr2 137790268 137790289 -115466294 + (CA)n Simple_repeat Simple_repeat 2 22 0 33 43 0 0 chr2 137792487 137792534 -115464049 + AT_rich Low_complexity Low_complexity 1 47 0 1470 199 17 13 chr2 137793172 137793474 -115463109 + AluJb SINE Alu 1 303 -9 510 169 0 0 chr2 137793828 137793900 -115462683 - MER58A DNA MER1_type -1 223 152 466 267 0 9 chr2 137793900 137794016 -115462567 - MER58A DNA MER1_type 0 115 1 356 327 63 19 chr2 137794153 137794312 -115462271 + L2 LINE L2 2819 2984 -329 2559 186 98 35 chr2 137794546 137795211 -115461372 - MER39 LTR ERV1 0 707 1 278 228 20 129 chr2 137796024 137796125 -115460458 - MER77 LTR ERV1 -515 90 1 237 65 0 0 chr2 137796164 137796195 -115460388 + (A)n Simple_repeat Simple_repeat 1 31 0 28 48 0 0 chr2 137797190 137797232 -115459351 + AT_rich Low_complexity Low_complexity 1 42 0 2358 65 0 40 chr2 137798515 137798839 -115457744 - AluY SINE Alu 0 311 1 613 234 38 47 chr2 137798888 137799123 -115457460 + pTR5 LTR ERV1 743 975 -1463 3931 146 44 31 chr2 137799317 137800137 -115456446 + pTR5 LTR ERV1 116 2468 0 24 0 0 0 chr2 137801129 137801153 -115455430 + AT_rich Low_complexity Low_complexity 1 24 0 2580 177 55 6 chr2 137801323 137801815 -115454768 - MLT2B1 LTR ERVL -4 516 1 22 35 0 0 chr2 137802431 137802460 -115454123 + AT_rich Low_complexity Low_complexity 1 29 0 2534 64 0 0 chr2 137802623 137802921 -115453662 + AluY SINE Alu 1 298 -13 1167 286 90 12 chr2 137803007 137803409 -115453174 + LTR16A LTR ERVL 17 449 -1 306 243 43 107 chr2 137803409 137803549 -115453034 + MER94 DNA DNA 4 134 0 365 319 48 24 chr2 137803571 137803737 -115452846 + MIR SINE MIR 63 232 -30 382 311 50 37 chr2 137803740 137803901 -115452682 - MIR SINE MIR -99 163 1 609 309 42 28 chr2 137803963 137804248 -115452335 - MLT1K LTR MaLR 0 588 300 881 306 88 0 chr2 137804343 137804663 -115451920 + L2 LINE L2 1321 1668 -1646 204 294 132 15 chr2 137805453 137805589 -115450994 - MIR SINE MIR -65 197 46 388 296 145 61 chr2 137805662 137806139 -115450444 + MLT1F LTR MaLR 18 534 -8 284 354 0 24 chr2 137806271 137806398 -115450185 + MIR SINE MIR 29 152 -110 325 325 26 0 chr2 137806600 137806714 -115449869 - L2 LINE L2 -5 3308 3192 4569 253 66 34 chr2 137807766 137810621 -115445962 + L1M4 LINE L1 15 2991 -3653 645 224 94 0 chr2 137810676 137810846 -115445737 + L1M4 LINE L1 4026 4211 -2433 * 6655 219 16 8 chr2 137810841 137812270 -115444313 + L1PA16 LINE L1 1 1257 -5592 301 170 0 0 chr2 137812265 137812312 -115444271 - L1PA15-16 LINE L1 -5691 1158 1112 * 2595 97 5 24 chr2 137812323 137812694 -115443889 - THE1B LTR MaLR 0 364 1 9777 117 17 29 chr2 137812694 137814159 -115442424 - THE1B-int LTR MaLR 0 1580 133 5091 187 16 20 chr2 137814153 137815727 -115440856 + L1PA16 LINE L1 5302 6864 -5 * 647 237 31 18 chr2 137815763 137815987 -115440596 + L1M4 LINE L1 4227 4453 -2191 2456 194 13 15 chr2 137816008 137816693 -115439890 + L1M4 LINE L1 5594 6277 -405 4792 99 33 0 chr2 137817072 137817292 -115439291 + L1PA13 LINE L1 5414 5625 -538 2592 104 0 27 chr2 137817292 137817666 -115438917 - THE1B LTR MaLR 0 364 1 4792 99 33 0 chr2 137817666 137818169 -115438414 + L1PA13 LINE L1 5625 6161 -2 189 189 19 75 chr2 137818275 137818328 -115438255 + L2 LINE L2 3168 3217 -96 201 147 0 0 chr2 137818446 137818480 -115438103 + (TG)n Simple_repeat Simple_repeat 1 34 0 260 178 68 27 chr2 137820700 137820773 -115435810 - L1ME4a LINE L1 -78 6043 5968 1906 202 13 2 chr2 137820779 137821175 -115435408 - L1PA16 LINE L1 -3 6163 5764 1148 258 74 47 chr2 137821586 137822031 -115434552 + MLT1C LTR MaLR 6 462 -5 189 0 0 0 chr2 137822062 137822083 -115434500 + (CCAA)n Simple_repeat Simple_repeat 4 24 0 2110 70 0 39 chr2 137822670 137822955 -115433628 + AluY SINE Alu 38 311 0 344 270 40 43 chr2 137824464 137824669 -115431914 - MIR SINE MIR 0 262 8 196 313 15 30 chr2 137824879 137824946 -115431637 - MIR SINE MIR -15 247 182 2404 73 0 10 chr2 137825229 137825531 -115431052 - AluY SINE Alu -12 299 1 296 308 69 8 chr2 137826066 137826196 -115430387 - MIR SINE MIR -122 140 3 270 0 0 0 chr2 137827207 137827237 -115429346 + (A)n Simple_repeat Simple_repeat 1 30 0 757 251 71 14 chr2 137827482 137827849 -115428734 + L1M4 LINE L1 2250 2637 -3509 535 206 18 18 chr2 137827942 137828302 -115428281 + CT-rich Low_complexity Low_complexity 1 360 0 21 0 0 0 chr2 137828313 137828334 -115428249 + AT_rich Low_complexity Low_complexity 1 21 0 433 216 26 60 chr2 137828390 137828506 -115428077 + MLT1D LTR MaLR 5 116 -389 201 288 0 48 chr2 137829202 137829348 -115427235 + (CCG)n Simple_repeat Simple_repeat 3 141 0 2075 113 7 0 chr2 137830009 137830300 -115426283 + AluY SINE Alu 3 295 -16 883 269 4 8 chr2 137830300 137830542 -115426041 + MLT1D LTR MaLR 265 505 0 1079 79 0 0 chr2 137831758 137831898 -115424685 + AluY SINE Alu 156 295 -16 344 304 59 44 chr2 137832689 137832824 -115423759 - MER5A DNA MER1_type -1 188 52 1357 119 45 15 chr2 137832928 137833130 -115423453 + AluSg SINE Alu 1 208 -102 1790 130 62 76 chr2 137833355 137833724 -115422859 - THE1B LTR MaLR 0 364 1 1431 194 23 78 chr2 137833848 137834234 -115422349 + MLT1A1 LTR MaLR 1 365 0 250 315 28 42 chr2 137835972 137836115 -115420468 + HAL1b LINE L1 245 385 -963 1198 323 54 16 chr2 137836232 137836968 -115419615 + L1MEc LINE L1 150 913 -5483 312 320 77 6 chr2 137836980 137837136 -115419447 + L1MEc LINE L1 1079 1245 -4868 227 200 105 29 chr2 137837157 137837262 -115419321 + L1MEc LINE L1 1440 1552 -4844 1429 221 0 11 chr2 137837452 137837733 -115418850 + AluJb SINE Alu 11 288 -24 22 0 0 0 chr2 137837733 137837755 -115418828 + AT_rich Low_complexity Low_complexity 1 22 0 1645 209 51 2 chr2 137838929 137839322 -115417261 + MER54A LTR ERVL 1 412 -489 2136 127 74 15 chr2 137839331 137839669 -115416914 + THE1B LTR MaLR 7 364 0 1382 254 46 10 chr2 137839709 137840122 -115416461 + MER54A LTR ERVL 474 901 0 26 0 0 0 chr2 137840924 137840950 -115415633 + AT_rich Low_complexity Low_complexity 1 26 0 340 253 27 20 chr2 137841065 137841215 -115415368 + (TA)n Simple_repeat Simple_repeat 1 151 0 34 55 0 0 chr2 137841372 137841427 -115415156 + AT_rich Low_complexity Low_complexity 1 55 0 4097 170 23 23 chr2 137841708 137842691 -115413892 - L1PA16 LINE L1 -177 5989 5011 3376 243 42 30 chr2 137842821 137842952 -115413631 - Tigger6a DNA MER2_type -514 1083 955 1682 203 3 3 chr2 137842952 137843258 -115413325 + AluJb SINE Alu 1 306 -6 3376 243 42 30 chr2 137843258 137844195 -115412388 - Tigger6a DNA MER2_type -642 955 2 904 268 77 17 chr2 137844198 137844867 -115411716 + L1MEc LINE L1 2050 2732 -3483 324 0 0 0 chr2 137844953 137844989 -115411594 + (TG)n Simple_repeat Simple_repeat 1 36 0 1638 240 49 70 chr2 137846024 137846536 -115410047 - MER77 LTR ERV1 -2 603 103 829 134 8 0 chr2 137847326 137847453 -115409130 - AluYb8 SINE Alu -179 139 12 310 331 80 17 chr2 137847633 137847808 -115408775 + L1ME3A LINE L1 5979 6164 -6 198 0 0 0 chr2 137848400 137848422 -115408161 + (T)n Simple_repeat Simple_repeat 1 22 0 1531 198 35 0 chr2 137848492 137848780 -115407803 - AluJb SINE Alu -14 298 1 205 197 53 0 chr2 137848810 137848886 -115407697 + (TA)n Simple_repeat Simple_repeat 1 80 0 258 258 15 0 chr2 137850342 137850408 -115406175 - MIR3 SINE MIR -47 161 95 1303 170 130 11 chr2 137850882 137851152 -115405431 + AluJb SINE Alu 1 302 0 1278 112 0 35 chr2 137851274 137851471 -115405112 + MER30B DNA MER1_type 1 190 0 723 157 0 0 chr2 137851836 137851951 -115404632 + FLAM_C SINE Alu 1 115 -18 26 0 0 0 chr2 137851953 137851979 -115404604 + AT_rich Low_complexity Low_complexity 1 26 0 232 234 0 47 chr2 137852470 137852534 -115404049 - MER103 DNA DNA -46 120 60 623 71 118 21 chr2 137852851 137853269 -115403314 + (AAATG)n Simple_repeat Simple_repeat 1 458 0 546 39 150 13 chr2 137853281 137853434 -115403149 + (AAATG)n Simple_repeat Simple_repeat 5 178 0 565 60 106 44 chr2 137853481 137853814 -115402769 + (AAATG)n Simple_repeat Simple_repeat 1 353 0 544 84 113 33 chr2 137853864 137854188 -115402395 + (AAATG)n Simple_repeat Simple_repeat 1 349 0 183 83 125 0 chr2 137854212 137854260 -115402323 + (AAATG)n Simple_repeat Simple_repeat 5 58 0 657 64 104 24 chr2 137854272 137854548 -115402035 + (AAATG)n Simple_repeat Simple_repeat 1 297 0 1675 139 182 19 chr2 137854654 137855027 -115401556 + Tigger2a DNA MER2_type 1 434 0 22 56 0 0 chr2 137855253 137855289 -115401294 + AT_rich Low_complexity Low_complexity 1 36 0 22 56 0 0 chr2 137855801 137855837 -115400746 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr2 137855961 137855982 -115400601 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 137857139 137857160 -115399423 + AT_rich Low_complexity Low_complexity 1 21 0 2227 102 3 3 chr2 137857237 137857541 -115399042 - AluSx SINE Alu -8 304 1 212 147 0 0 chr2 137857578 137857612 -115398971 + (TC)n Simple_repeat Simple_repeat 1 34 0 565 291 73 111 chr2 137857804 137858543 -115398040 - L1MEd LINE L1 -3303 2826 2116 2174 118 0 0 chr2 137858720 137859024 -115397559 + AluSg SINE Alu 1 304 -6 28 29 0 0 chr2 137859372 137859407 -115397176 + AT_rich Low_complexity Low_complexity 1 35 0 301 331 106 23 chr2 137859543 137859845 -115396738 - L1MEd LINE L1 -4867 1252 926 28 29 0 0 chr2 137859890 137859925 -115396658 + AT_rich Low_complexity Low_complexity 1 35 0 295 323 43 0 chr2 137860123 137860216 -115396367 - L1MEd LINE L1 -5493 626 530 534 113 12 0 chr2 137861085 137861191 -115395392 + AluY SINE Alu 200 306 0 599 269 109 16 chr2 137861588 137861983 -115394600 + L1MEc LINE L1 2132 2527 -3688 1997 193 106 12 chr2 137861986 137862410 -115394173 + MLT1C LTR MaLR 4 467 0 326 286 102 25 chr2 137862464 137862660 -115393923 + L1M4 LINE L1 8 218 -6324 331 315 16 0 chr2 137862977 137863104 -115393479 + L1M4 LINE L1 801 929 -5717 1524 218 82 36 chr2 137863286 137863977 -115392606 + L1M4 LINE L1 820 1523 -5022 289 274 7 14 chr2 137864011 137864157 -115392426 + CT-rich Low_complexity Low_complexity 1 145 0 25 0 0 0 chr2 137864447 137864472 -115392111 + AT_rich Low_complexity Low_complexity 1 25 0 516 334 84 32 chr2 137864913 137865260 -115391323 - L2 LINE L2 -499 2815 2451 294 29 0 0 chr2 137868006 137868041 -115388542 + (TG)n Simple_repeat Simple_repeat 2 36 0 25 65 0 0 chr2 137869626 137869672 -115386911 + AT_rich Low_complexity Low_complexity 1 46 0 3080 190 36 8 chr2 137870188 137870851 -115385732 + L1MB3 LINE L1 5501 6182 -1 197 295 62 98 chr2 137872297 137872541 -115384042 - L3 LINE CR1 -583 994 760 384 372 51 7 chr2 137872562 137872850 -115383733 + L2 LINE L2 2748 3047 -266 2396 218 43 7 chr2 137872911 137873512 -115383071 - L1MB7 LINE L1 0 6184 5562 4389 254 71 21 chr2 137873528 137875322 -115381261 - L1MB7 LINE L1 -729 5445 3565 634 259 118 63 chr2 137875485 137875764 -115380819 + MER77 LTR ERV1 323 599 -6 1585 214 20 6 chr2 137876392 137876734 -115379849 - MER7A DNA MER2_type 0 346 2 25 0 0 0 chr2 137876786 137876811 -115379772 + AT_rich Low_complexity Low_complexity 1 25 0 258 291 0 25 chr2 137877000 137877079 -115379504 + (TATG)n Simple_repeat Simple_repeat 3 79 0 22 35 0 0 chr2 137877279 137877308 -115379275 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr2 137877998 137878023 -115378560 + AT_rich Low_complexity Low_complexity 1 25 0 226 218 0 73 chr2 137879561 137879616 -115376967 + LTR16C LTR ERVL 83 133 -358 248 351 127 0 chr2 137879664 137879798 -115376785 + LTR16C LTR ERVL 237 387 -104 2403 170 99 11 chr2 137880362 137880908 -115375675 + LTR49 LTR ERV1 1 594 -1 1755 170 58 23 chr2 137881090 137881520 -115375063 + LTR56 LTR ERV1 1 445 0 570 225 150 11 chr2 137881660 137881847 -115374736 - MER20 DNA MER1_type -3 216 4 303 303 50 17 chr2 137881957 137882076 -115374507 - L1MB7 LINE L1 -3324 2822 2700 25 31 0 0 chr2 137882099 137882131 -115374452 + AT_rich Low_complexity Low_complexity 1 32 0 25 51 0 0 chr2 137882334 137882373 -115374210 + AT_rich Low_complexity Low_complexity 1 39 0 21 57 0 0 chr2 137882400 137882435 -115374148 + AT_rich Low_complexity Low_complexity 1 35 0 225 0 0 0 chr2 137882692 137882717 -115373866 + (CA)n Simple_repeat Simple_repeat 2 26 0 1576 179 88 44 chr2 137882832 137882863 -115373720 + LTR49 LTR ERV1 1 29 -566 2038 120 32 0 chr2 137882863 137883147 -115373436 - AluSq SINE Alu -20 293 1 1576 179 88 44 chr2 137883147 137883524 -115373059 + LTR49 LTR ERV1 29 427 -168 242 191 16 16 chr2 137883558 137883621 -115372962 + (TA)n Simple_repeat Simple_repeat 2 64 0 276 221 21 42 chr2 137883621 137883716 -115372867 + LTR48 LTR ERV1 645 737 -50 806 150 23 0 chr2 137885128 137885261 -115371322 + MSTB1 LTR MaLR 1 136 -296 343 326 58 7 chr2 137885342 137885480 -115371103 - L1ME LINE L1 -4983 1222 1078 297 296 69 63 chr2 137885518 137886140 -115370443 - L1ME LINE L1 -5329 1067 442 397 243 40 27 chr2 137886328 137886476 -115370107 - L1ME LINE L1 -6192 204 55 24 0 0 0 chr2 137886730 137886754 -115369829 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 137886879 137886900 -115369683 + AT_rich Low_complexity Low_complexity 1 21 0 262 315 63 17 chr2 137887121 137887477 -115369106 - L1MDa LINE L1 -4608 1932 1558 198 0 0 0 chr2 137887604 137887626 -115368957 + (TTTTA)n Simple_repeat Simple_repeat 4 25 0 42351 55 3 1 chr2 137887626 137893755 -115362828 - L1PA3 LINE L1 -13 6142 9 755 128 6 1 chr2 137893778 137903458 -115353125 + CER Satellite Satellite 1 9728 0 379 275 42 0 chr2 138003533 138003653 -115252930 + L1ME3A LINE L1 3993 4117 -2029 22 35 0 0 chr2 138003685 138003714 -115252869 + AT_rich Low_complexity Low_complexity 1 29 0 840 254 73 99 chr2 138003920 138004484 -115252099 + L1ME3A LINE L1 5609 6157 -13 2019 151 52 1 chr2 138004492 138004870 -115251713 + L1MC2 LINE L1 5751 6149 -195 1065 171 58 5 chr2 138004971 138005176 -115251407 + L1MC2 LINE L1 6129 6344 0 349 271 10 0 chr2 138005403 138005499 -115251084 + GA-rich Low_complexity Low_complexity 1 97 0 1782 181 0 0 chr2 138006173 138006465 -115250118 - AluJb SINE Alu -20 292 1 1307 121 2 0 chr2 138006667 138008257 -115248326 + ALR/Alpha Satellite centromeric 1 1593 -8 1989 69 0 4 chr2 138008357 138008604 -115247979 - AluY SINE Alu -65 246 1 1415 146 10 87 chr2 138008688 138009101 -115247482 - Tigger4(Zombi) DNA MER2_type -9 2722 1 24 77 0 0 chr2 138009268 138009320 -115247263 + AT_rich Low_complexity Low_complexity 1 52 0 733 272 0 0 chr2 138009451 138009613 -115246970 + AluJb SINE Alu 147 308 -4 1279 208 68 3 chr2 138009855 138010177 -115246406 + L1MB8 LINE L1 4142 4484 -1662 805 186 35 119 chr2 138010283 138010595 -115245988 + L1MB8 LINE L1 5850 6135 -43 1113 111 4 0 chr2 138011292 138012554 -115244029 - ACRO1 Satellite acromeric -1 1266 1 225 119 0 0 chr2 138012970 138013012 -115243571 + (GA)n Simple_repeat Simple_repeat 2 43 0 201 176 0 0 chr2 138013098 138013132 -115243451 + (CAA)n Simple_repeat Simple_repeat 2 35 0 492 32 0 0 chr2 138014254 138014316 -115242267 + (TATG)n Simple_repeat Simple_repeat 2 63 0 1862 122 0 21 chr2 138014316 138014603 -115241980 - AluSx SINE Alu -31 281 1 509 177 2 74 chr2 138014736 138014880 -115241703 - MER39B LTR ERV1 -242 411 192 420 200 0 0 chr2 138014890 138015010 -115241573 + GA-rich Low_complexity Low_complexity 2 121 0 615 192 0 0 chr2 138015028 138015195 -115241388 + GA-rich Low_complexity Low_complexity 1 167 0 353 146 0 12 chr2 138015217 138015299 -115241284 + (GA)n Simple_repeat Simple_repeat 1 81 0 1261 156 2 1 chr2 138015399 138018200 -115238383 - ALR/Alpha Satellite centromeric 0 2805 1 5934 87 16 37 chr2 138018301 138019231 -115237352 - SVA Other Other -43 1343 433 5402 83 26 12 chr2 138019297 138020227 -115236356 - SVA Other Other -520 866 50 743 30 0 10 chr2 138020233 138020332 -115236251 + (GGGAGA)n Simple_repeat Simple_repeat 1 98 0 1177 134 2 0 chr2 138020336 138020677 -115235906 - ALR/Alpha Satellite centromeric 0 341 1 3303 142 11 4 chr2 138020784 138021552 -115235031 + L1P5 LINE L1 4939 5713 -438 897 278 26 13 chr2 138021705 138021932 -115234651 - AluJo SINE Alu -82 230 1 2371 89 0 10 chr2 138021955 138022269 -115234314 - AluY SINE Alu 0 311 1 659 315 60 31 chr2 138022438 138022953 -115233630 - HAL1 LINE L1 -760 1747 1218 431 249 99 108 chr2 138023119 138023472 -115233111 + HAL1 LINE L1 1550 1899 -608 25 65 0 0 chr2 138023646 138023692 -115232891 + AT_rich Low_complexity Low_complexity 1 46 0 1013 284 81 44 chr2 138023741 138024309 -115232274 - L2 LINE L2 -1328 1986 1398 2009 156 7 0 chr2 138025077 138025384 -115231199 + AluSx SINE Alu 1 309 -3 2246 113 0 3 chr2 138025429 138025740 -115230843 + AluY SINE Alu 2 311 0 1356 196 103 0 chr2 138025765 138026046 -115230537 + AluSx SINE Alu 1 310 -2 2014 129 0 65 chr2 138026074 138026399 -115230184 + AluSg SINE Alu 1 304 -6 664 224 0 14 chr2 138028826 138028969 -115227614 + L1ME1 LINE L1 6021 6161 -5 686 292 68 8 chr2 138029357 138029607 -115226976 + L2 LINE L2 737 1001 -2313 4180 107 8 89 chr2 138030356 138031078 -115225505 - MER4A LTR ERV1 0 664 1 646 295 103 39 chr2 138031305 138031926 -115224657 + L1MC5 LINE L1 7262 7922 -39 361 262 21 21 chr2 138033349 138033494 -115223089 + MIR SINE MIR 62 206 -56 180 179 0 0 chr2 138033975 138034014 -115222569 + GA-rich Low_complexity Low_complexity 3 41 0 269 250 80 27 chr2 138034014 138034126 -115222457 + MER34 LTR ERV1 152 269 -273 783 200 0 0 chr2 138034165 138034300 -115222283 - AluJo SINE Alu -176 136 2 834 216 65 5 chr2 138034309 138034508 -115222075 + MER34 LTR ERV1 321 531 -11 714 265 63 20 chr2 138034520 138034822 -115221761 + L1M4 LINE L1 3146 3460 -2686 207 0 0 0 chr2 138034860 138034883 -115221700 + (CA)n Simple_repeat Simple_repeat 2 24 0 865 168 0 7 chr2 138034896 138035039 -115221544 - AluJb SINE Alu -167 145 4 721 229 28 41 chr2 138035115 138035333 -115221250 + L1M4 LINE L1 3528 3742 -2404 880 233 125 21 chr2 138035333 138035620 -115220963 + MER2 DNA MER2_type 1 317 -28 489 259 14 22 chr2 138035633 138035772 -115220811 + L1ME2 LINE L1 274 411 -5659 1628 260 81 22 chr2 138035776 138036003 -115220580 + L1ME2 LINE L1 5193 5405 -693 2330 96 0 0 chr2 138036003 138036296 -115220287 + AluSq SINE Alu 1 293 -20 1628 260 81 22 chr2 138036296 138036649 -115219934 + L1ME2 LINE L1 5405 5807 -291 2286 104 3 0 chr2 138036809 138037117 -115219466 - AluSg SINE Alu -1 309 1 5960 31 18 0 chr2 138037823 138038495 -115218088 - L1PA4 LINE L1 -3 6152 5469 891 44 114 0 chr2 138039829 138039943 -115216640 + AluY SINE Alu 6 132 -179 1902 91 41 66 chr2 138039956 138040275 -115216308 + AluY SINE Alu 1 311 0 939 236 159 39 chr2 138040727 138041160 -115215423 + LTR33 LTR ERVL 37 521 0 548 238 0 0 chr2 138041869 138042043 -115214540 - ACRO1 Satellite acromeric 0 174 1 189 74 0 0 chr2 138042467 138042494 -115214089 + (TG)n Simple_repeat Simple_repeat 2 28 0 254 267 19 6 chr2 138042937 138043062 -115213521 + MER5A DNA MER1_type 3 187 -2 1784 219 61 9 chr2 138043309 138043902 -115212681 + MER21B LTR ERV1 200 861 -2 24 53 0 0 chr2 138044093 138044131 -115212452 + AT_rich Low_complexity Low_complexity 1 38 0 2318 77 7 0 chr2 138044131 138044429 -115212154 + AluSc SINE Alu 1 300 -9 833 221 0 0 chr2 138044431 138044580 -115212003 - FRAM SINE Alu -28 148 1 185 0 0 39 chr2 138044828 138044854 -115211729 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2285 77 14 0 chr2 138044854 138045140 -115211443 - L1PA10 LINE L1 -19 6149 5860 1036 140 0 12 chr2 138045440 138045604 -115210979 + AluSg/x SINE Alu 147 308 -4 1251 185 123 15 chr2 138045706 138045966 -115210617 - AluJo SINE Alu -24 288 1 304 259 55 109 chr2 138046254 138046351 -115210232 - L1 LINE L1 -2368 3778 3696 270 56 0 0 chr2 138046351 138046387 -115210196 + (TTG)n Simple_repeat Simple_repeat 1 36 0 304 259 55 109 chr2 138046387 138046490 -115210093 - L1 LINE L1 -2450 3696 3589 1891 140 7 0 chr2 138046770 138047062 -115209521 + AluSq SINE Alu 1 294 -19 434 252 19 0 chr2 138047142 138047249 -115209334 + MIR SINE MIR 110 218 -44 929 182 97 0 chr2 138047652 138047828 -115208755 + AluJb SINE Alu 1 193 -119 193 0 94 0 chr2 138047841 138047873 -115208710 + A-rich Low_complexity Low_complexity 2 36 0 464 211 39 29 chr2 138048137 138048241 -115208342 - MLT1H LTR MaLR -388 161 57 1973 203 41 24 chr2 138048360 138048819 -115207764 - MLT1C LTR MaLR 0 467 1 698 300 76 57 chr2 138048950 138049317 -115207266 + L2 LINE L2 753 1136 -2178 2130 119 3 0 chr2 138049317 138049611 -115206972 + AluSq SINE Alu 5 299 -14 698 300 76 57 chr2 138049611 138049806 -115206777 + L2 LINE L2 1136 1326 -1988 569 167 42 42 chr2 138049907 138050051 -115206532 + MER5C DNA MER1_type 180 323 -1 1128 339 41 17 chr2 138050181 138050600 -115205983 - LTR33 LTR ERVL -2 519 91 2236 102 10 3 chr2 138051002 138051307 -115205276 - AluSx SINE Alu -5 307 1 457 234 72 0 chr2 138051915 138052026 -115204557 + MER5C DNA MER1_type 3 121 -203 1471 226 15 51 chr2 138052123 138052535 -115204048 - MLT2C1 LTR ERVL 0 397 1 229 249 53 95 chr2 138052549 138052718 -115203865 - L1MC5 LINE L1 -32 7929 7768 538 328 16 11 chr2 138053025 138053214 -115203369 - MLT1H LTR MaLR -276 273 84 663 228 71 66 chr2 138053303 138053741 -115202842 - L1MC5 LINE L1 -295 7666 7227 677 280 38 32 chr2 138054362 138054708 -115201875 - L1MC4 LINE L1 -1 8041 7694 989 227 12 32 chr2 138054958 138055209 -115201374 + MLT1A2 LTR MaLR 128 373 -1 2388 139 3 11 chr2 138055980 138056346 -115200237 + THE1B LTR MaLR 2 364 0 2251 112 32 64 chr2 138056379 138056567 -115200016 - THE1B LTR MaLR -1 363 191 1927 139 14 3 chr2 138056567 138056854 -115199729 - AluSc SINE Alu -15 294 5 2251 112 32 64 chr2 138056854 138057040 -115199543 - THE1B LTR MaLR -173 191 1 4389 103 8 2 chr2 138057040 138057633 -115198950 - THE1B-int LTR MaLR 0 1580 984 571 69 0 0 chr2 138057650 138057722 -115198861 - THE1B LTR MaLR -292 72 1 393 266 64 0 chr2 138057725 138057834 -115198749 - MIR SINE MIR -129 133 18 684 221 19 71 chr2 138057908 138058175 -115198408 - MER112 DNA MER1_type -3 253 1 234 118 0 0 chr2 138058694 138058728 -115197855 + MER91 DNA MER1_type 2 35 -161 1183 253 34 0 chr2 138059047 138059312 -115197271 - AluJb SINE Alu -38 274 1 308 121 0 52 chr2 138061240 138061298 -115195285 + MLT1I LTR MaLR 349 403 -6 1704 157 13 51 chr2 138061824 138062136 -115194447 - AluJo SINE Alu -12 300 1 419 316 64 22 chr2 138062285 138062680 -115193903 + L1ME LINE L1 5414 5823 -298 1104 237 108 51 chr2 138063156 138063565 -115193018 - MLT1H LTR MaLR -8 541 110 1946 103 41 4 chr2 138064328 138064599 -115191984 + AluSg SINE Alu 26 306 -4 634 286 40 4 chr2 138064641 138064868 -115191715 + L1MD2 LINE L1 4698 4932 -1214 882 221 77 21 chr2 138065031 138065316 -115191267 - L1ME2 LINE L1 -10 6154 5854 696 184 59 0 chr2 138065319 138065471 -115191112 - MER63 DNA MER1_type -899 162 2 1453 256 87 15 chr2 138065644 138066104 -115190479 + LTR40a LTR ERVL 25 517 -2 1911 137 21 25 chr2 138066172 138066434 -115190149 - L1MB2 LINE L1 -1 6170 5909 2234 100 0 13 chr2 138066434 138066745 -115189838 - AluY SINE Alu -4 307 1 1911 137 21 25 chr2 138066745 138067043 -115189540 - L1MB2 LINE L1 -262 5909 5547 1088 190 101 0 chr2 138067033 138067301 -115189282 - L1ME2 LINE L1 -286 5878 5584 * 673 161 51 0 chr2 138067400 138067518 -115189065 + FAM SINE Alu 21 144 -41 2039 145 21 0 chr2 138067822 138068112 -115188471 - AluSc SINE Alu -13 296 1 2186 227 115 24 chr2 138068187 138069171 -115187412 - L1ME2 LINE L1 -550 5616 4565 3691 235 44 12 chr2 138069201 138069288 -115187295 + Cheshire DNA MER1_type 1 84 -2336 1854 172 3 3 chr2 138069288 138069579 -115187004 - AluJb SINE Alu -21 291 1 3691 235 44 12 chr2 138069579 138070392 -115186191 + Cheshire DNA MER1_type 84 930 -1490 251 148 33 16 chr2 138070669 138070730 -115185853 - LTR37A LTR ERV1 0 426 365 4456 205 91 12 chr2 138070740 138071790 -115184793 + L1MD2 LINE L1 5218 6349 -10 2245 102 0 3 chr2 138071980 138072274 -115184309 - AluSc SINE Alu -12 297 5 779 188 0 8 chr2 138072429 138072557 -115184026 - FLAM_C SINE Alu -14 129 3 232 260 163 8 chr2 138072724 138072847 -115183736 + L1MC5 LINE L1 7278 7419 -542 1871 107 65 0 chr2 138073535 138073825 -115182758 + L1PA10 LINE L1 5860 6168 0 1092 205 70 10 chr2 138074011 138074465 -115182118 - MER21B LTR ERV1 -132 799 208 262 263 92 0 chr2 138074719 138074795 -115181788 - MER5A DNA MER1_type -2 187 105 233 57 29 0 chr2 138075277 138075312 -115181271 + (CA)n Simple_repeat Simple_repeat 1 36 0 568 207 11 11 chr2 138075736 138075999 -115180584 + ACRO1 Satellite acromeric 1 263 -31 733 181 0 0 chr2 138076324 138076542 -115180041 + ACRO1 Satellite acromeric 1 218 -2 206 154 0 26 chr2 138077755 138077794 -115178789 + CT-rich Low_complexity Low_complexity 4 41 0 999 122 205 65 chr2 138080062 138080325 -115176258 - AluSg SINE Alu 0 300 1 293 123 0 35 chr2 138080373 138080430 -115176153 + (CATA)n Simple_repeat Simple_repeat 4 58 0 249 33 0 0 chr2 138080564 138080594 -115175989 + (TTCC)n Simple_repeat Simple_repeat 2 31 0 320 272 0 11 chr2 138080670 138080762 -115175821 + AluJb SINE Alu 167 257 -45 297 109 0 0 chr2 138080764 138080810 -115175773 + (GGGTG)n Simple_repeat Simple_repeat 3 48 0 588 29 0 0 chr2 138080936 138081006 -115175577 + (TTCC)n Simple_repeat Simple_repeat 3 72 0 631 192 8 139 chr2 138081039 138081173 -115175410 - AluJb SINE Alu -81 231 148 225 119 0 0 chr2 138081173 138081215 -115175368 + (TATG)n Simple_repeat Simple_repeat 4 45 0 631 192 8 139 chr2 138081215 138081346 -115175237 - AluJb SINE Alu -164 148 1 360 190 63 0 chr2 138081485 138081564 -115175019 - FLAM_C SINE Alu -26 107 24 222 37 0 0 chr2 138081671 138081698 -115174885 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 1473 139 0 5 chr2 138081703 138081918 -115174665 - AluSp SINE Alu -31 282 69 293 68 23 0 chr2 138081949 138081993 -115174590 + (TTTTC)n Simple_repeat Simple_repeat 1 45 0 257 240 50 40 chr2 138082730 138082830 -115173753 + MER89 LTR ERV1 323 423 -136 405 0 0 0 chr2 138082994 138083039 -115173544 + (CA)n Simple_repeat Simple_repeat 2 46 0 1713 180 0 0 chr2 138083171 138083455 -115173128 + AluSx SINE Alu 1 284 -28 481 197 71 31 chr2 138083475 138083602 -115172981 + AluJb SINE Alu 130 261 -51 966 86 23 17 chr2 138083636 138083811 -115172772 + (TTTC)n Simple_repeat Simple_repeat 1 176 0 234 241 0 0 chr2 138083811 138083865 -115172718 + CT-rich Low_complexity Low_complexity 4 57 0 325 158 0 0 chr2 138083865 138083922 -115172661 - AluJ/FLAM SINE Alu -242 60 4 739 220 136 61 chr2 138083990 138084145 -115172438 - AluJo SINE Alu -16 286 101 2192 108 3 0 chr2 138084145 138084450 -115172133 - AluSp SINE Alu -7 306 1 739 220 136 61 chr2 138084450 138084558 -115172025 - AluJo SINE Alu -201 101 3 214 85 43 64 chr2 138084608 138084655 -115171928 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 842 248 7 54 chr2 138085143 138085421 -115171162 + L1PA13 LINE L1 5888 6152 -11 220 194 0 0 chr2 138085421 138085457 -115171126 + polypurine Low_complexity Low_complexity 2 37 0 1685 140 45 14 chr2 138085553 138085845 -115170738 - AluSx SINE Alu -2 310 10 344 68 0 0 chr2 138085950 138085994 -115170589 + AluSp/q SINE Alu 240 283 -20 207 0 0 0 chr2 138086012 138086035 -115170548 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1541 135 0 16 chr2 138086109 138086387 -115170196 + AluSg SINE Alu 60 310 0 638 182 3 0 chr2 138086433 138086789 -115169794 + CT-rich Low_complexity Low_complexity 1 357 0 228 164 55 0 chr2 138086790 138086845 -115169738 + (TCTG)n Simple_repeat Simple_repeat 1 58 0 573 194 0 0 chr2 138086845 138087025 -115169558 + CT-rich Low_complexity Low_complexity 1 180 0 216 0 0 0 chr2 138087949 138087973 -115168610 + (CACCC)n Simple_repeat Simple_repeat 3 26 0 947 111 170 23 chr2 138088336 138088507 -115168076 - AluSg/x SINE Alu -21 291 96 192 77 0 0 chr2 138088569 138088595 -115167988 + (T)n Simple_repeat Simple_repeat 1 26 0 2230 109 0 3 chr2 138089296 138089598 -115166985 - AluSc SINE Alu -8 301 1 186 43 0 0 chr2 138089994 138090017 -115166566 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5309 31 8 2 chr2 138092312 138092948 -115163635 - L1P LINE L1 -932 5214 4575 4841 34 0 0 chr2 138092948 138093497 -115163086 + L1PA3 LINE L1 5593 6153 -2 259 275 28 37 chr2 138093626 138093735 -115162848 - LTR54B LTR ERV1 -352 146 39 1269 149 1 1 chr2 138094107 138099287 -115157296 - ALR/Alpha Satellite centromeric -1 5183 1 269 309 74 0 chr2 138099415 138099496 -115157087 - MIR3 SINE MIR -33 175 89 1335 212 84 46 chr2 138100009 138100451 -115156132 - L1MD2 LINE L1 -10 6349 5890 301 303 64 96 chr2 138101231 138101545 -115155038 - L1M2 LINE L1 -5624 1225 922 688 135 119 8 chr2 138107117 138107243 -115149340 + AluJb SINE Alu 1 140 -172 2223 86 0 3 chr2 138107283 138107575 -115149008 + AluY SINE Alu 1 291 -20 24 53 0 0 chr2 138107575 138107613 -115148970 + AT_rich Low_complexity Low_complexity 1 38 0 2153 97 3 0 chr2 138107634 138107922 -115148661 + AluSp SINE Alu 15 303 -10 249 33 0 0 chr2 138107981 138108011 -115148572 + (CCTG)n Simple_repeat Simple_repeat 1 30 0 427 161 0 97 chr2 138108012 138108105 -115148478 - AluJb SINE Alu -32 280 197 1232 141 3 1 chr2 138108211 138110741 -115145842 - ALR/Alpha Satellite centromeric 0 2536 1 453 201 6 0 chr2 138110720 138110841 -115145742 - CER Satellite Satellite 0 121 1 * 1230 287 19 40 chr2 138112365 138112835 -115143748 + MLT1C LTR MaLR 3 462 -5 215 247 86 62 chr2 138112842 138112923 -115143660 + MER5A DNA MER1_type 59 141 -48 609 215 70 65 chr2 138112953 138113139 -115143444 - MIR SINE MIR -48 214 28 23 0 0 0 chr2 138113175 138113198 -115143385 + AT_rich Low_complexity Low_complexity 1 23 0 1955 139 30 0 chr2 138113361 138113662 -115142921 - AluSg SINE Alu 0 310 1 2193 109 33 0 chr2 138113873 138114212 -115142371 - AluSp SINE Alu 0 349 1 195 377 83 31 chr2 138114520 138114976 -115141607 + L2 LINE L2 2164 2643 -671 428 126 0 55 chr2 138115027 138115154 -115141429 + (TA)n Simple_repeat Simple_repeat 1 120 0 22 56 0 0 chr2 138115830 138115866 -115140717 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr2 138115986 138116014 -115140569 + AT_rich Low_complexity Low_complexity 1 28 0 195 220 0 0 chr2 138116816 138116866 -115139717 + (TA)n Simple_repeat Simple_repeat 2 51 0 22 0 0 0 chr2 138116953 138116975 -115139608 + AT_rich Low_complexity Low_complexity 1 22 0 21 95 0 0 chr2 138117019 138117082 -115139501 + AT_rich Low_complexity Low_complexity 1 63 0 29 47 0 0 chr2 138117137 138117180 -115139403 + AT_rich Low_complexity Low_complexity 1 43 0 14926 33 13 0 chr2 138117234 138119698 -115136885 - L1PA3 LINE L1 -1 6154 3670 1191 132 11 0 chr2 138119862 138120044 -115136539 + AluSg/x SINE Alu 129 312 0 1357 135 4 1 chr2 138120214 138130355 -115126228 - ALR/Alpha Satellite centromeric -1 10168 1 7918 62 65 1 chr2 138130357 138136082 -115120501 - L1PA3 LINE L1 0 6155 1 1318 130 3 1 chr2 138136085 138144544 -115112039 - ALR/Alpha Satellite centromeric 0 8470 1 3912 113 0 0 chr2 138144556 138145079 -115111504 - SVA Other Other 0 1386 864 2342 218 60 18 chr2 138145183 138146346 -115110237 - L1ME1 LINE L1 -235 5931 4647 399 221 62 35 chr2 138146486 138146599 -115109984 - L1ME1 LINE L1 -2500 3646 3531 964 231 103 54 chr2 138146667 138146780 -115109803 - LTR50 LTR ERVL -2 793 687 2231 112 7 0 chr2 138146780 138147084 -115109499 + AluSg SINE Alu 1 306 -4 964 231 103 54 chr2 138147084 138147321 -115109262 - LTR50 LTR ERVL -108 687 426 274 219 98 0 chr2 138147548 138147630 -115108953 - LTR50 LTR ERVL -705 90 1 232 180 131 0 chr2 138147652 138147713 -115108870 - L1ME1 LINE L1 -3321 2825 2757 183 42 0 0 chr2 138148880 138148904 -115107679 + (TAGG)n Simple_repeat Simple_repeat 3 26 0 518 247 136 0 chr2 138149793 138149947 -115106636 + MIR SINE MIR 61 235 -27 547 261 40 40 chr2 138150419 138150595 -115105988 - MIR SINE MIR -46 216 41 24 77 0 0 chr2 138150693 138150745 -115105838 + AT_rich Low_complexity Low_complexity 1 52 0 320 116 0 47 chr2 138151628 138151714 -115104869 + (CCCTAA)n Simple_repeat Simple_repeat 2 83 0 2150 167 36 19 chr2 138151858 138152384 -115104199 - TAR1 Satellite telomeric -355 534 1 337 271 120 131 chr2 138152662 138153386 -115103197 - L1M2 LINE L1 -5456 1393 678 339 237 122 108 chr2 138152732 138153158 -115103425 + L1 LINE L1 676 1107 -5742 6124 234 60 23 chr2 138153415 138155707 -115100876 - L1M3 LINE L1 -570 5610 3232 832 244 19 19 chr2 138155722 138155935 -115100648 + MER4D LTR ERV1 683 895 -8 1594 148 0 0 chr2 138156256 138156492 -115100091 - AluSq SINE Alu 0 313 78 236 241 51 82 chr2 138156725 138156920 -115099663 + MER53 DNA DNA 1 189 0 1456 160 0 0 chr2 138157266 138157491 -115099092 + L1P3 LINE L1 3 227 -6622 257 168 0 0 chr2 138157525 138157574 -115099009 + L1 LINE L1 3134 3182 -3666 295 246 62 24 chr2 138157579 138157635 -115098948 + L1 LINE L1 3251 3303 -3545 2423 11 4 0 chr2 138157635 138157900 -115098683 + AluY SINE Alu 37 302 -9 295 246 62 24 chr2 138157900 138157974 -115098609 + L1 LINE L1 3303 3389 -3459 3811 192 47 23 chr2 138157987 138158522 -115098061 + L1PA16 LINE L1 4545 5066 -1100 5890 33 0 0 chr2 138158522 138159167 -115097416 - L1PA3 LINE L1 -3 6152 5508 3811 192 47 23 chr2 138159167 138160040 -115096543 + L1PA16 LINE L1 5066 5997 -169 1997 120 3 0 chr2 138160040 138160353 -115096230 + AluSx SINE Alu 1 314 0 3811 192 47 23 chr2 138160353 138160435 -115096148 + L1PA16 LINE L1 5997 6076 -90 23 54 0 0 chr2 138161153 138161190 -115095393 + AT_rich Low_complexity Low_complexity 1 37 0 1509 274 78 74 chr2 138161583 138161886 -115094697 - L1 LINE L1 -1052 5094 4794 1251 221 16 35 chr2 138161886 138162203 -115094380 - AluJb SINE Alu -1 311 1 1509 274 78 74 chr2 138162203 138162951 -115093632 - L1 LINE L1 -1352 4794 4035 1803 166 0 10 chr2 138162951 138163252 -115093331 - AluSx SINE Alu 0 312 15 1509 274 78 74 chr2 138163252 138163448 -115093135 - L1 LINE L1 -2111 4035 3841 1510 200 8 4 chr2 138163460 138163725 -115092858 + L1P3 LINE L1 398 663 -6186 10163 138 7 14 chr2 138163730 138165387 -115091196 + L1P3 LINE L1 1992 3635 -3214 6239 86 11 0 chr2 138165387 138166178 -115090405 + L1PA8 LINE L1 5354 6166 -6 420 319 21 0 chr2 138166326 138166470 -115090113 - MIR SINE MIR -76 186 40 1800 183 3 6 chr2 138167223 138167535 -115089048 - AluJb SINE Alu -1 311 1 1274 204 110 16 chr2 138167803 138168112 -115088471 + LTR51 LTR ERV1 235 572 -99 383 282 86 15 chr2 138168249 138168371 -115088212 - LTR16A1 LTR ERVL 0 491 379 2761 58 3 0 chr2 138168371 138168700 -115087883 - L1PA5 LINE L1 -1 6153 5824 383 282 86 15 chr2 138168700 138168794 -115087789 - LTR16A1 LTR ERVL -112 379 201 4204 170 101 8 chr2 138170107 138170861 -115085722 - LTR1B LTR ERV1 -2 824 1 271 247 13 13 chr2 138171909 138171986 -115084597 - MER41B-int LTR ERV1 -4392 731 655 251 390 53 30 chr2 138172092 138172261 -115084322 - MER41B-int LTR ERV1 -6184 574 402 1538 183 14 77 chr2 138172284 138172752 -115083831 - MER41B-int LTR ERV1 -4472 651 80 4520 134 5 2 chr2 138172752 138173385 -115083198 - MER41B LTR ERV1 0 635 1 1538 183 14 77 chr2 138173385 138173436 -115083147 - MER41B-int LTR ERV1 -5043 80 27 762 155 26 0 chr2 138173444 138173560 -115083023 + LOR1b LTR ERV1 343 461 0 * 900 200 0 0 chr2 138173560 138173708 -115082875 - Tigger7 DNA MER2_type -2337 150 3 2928 148 26 9 chr2 138173729 138174188 -115082395 - LTR24 LTR ERV1 0 467 1 315 93 0 0 chr2 138174209 138174252 -115082331 + MER44D DNA MER2_type 90 132 -573 2292 158 127 5 chr2 138174257 138174668 -115081915 - LOR1b LTR ERV1 0 461 1 1127 153 0 6 chr2 138174669 138174846 -115081737 - LOR1b-int LTR ERV1 -1 8119 7944 2344 161 69 13 chr2 138174849 138175297 -115081286 - LOR1-int LTR ERV1 -2633 5487 5015 2276 100 0 13 chr2 138175321 138175630 -115080953 + AluSx SINE Alu 1 305 -7 873 218 163 35 chr2 138175633 138175982 -115080601 - MLT1C LTR MaLR -59 408 1 8181 114 28 30 chr2 138176172 138177473 -115079110 - LOR1a-int LTR ERV1 -2111 4487 3916 1600 196 3 13 chr2 138177473 138177774 -115078809 - AluJo SINE Alu -14 298 1 8181 114 28 30 chr2 138177774 138177926 -115078657 - LOR1a-int LTR ERV1 -2682 3916 3765 8263 126 34 32 chr2 138177926 138179374 -115077209 - LOR1a-int LTR ERV1 -6247 1873 423 1310 206 21 0 chr2 138179419 138179657 -115076926 - LOR1a-int LTR ERV1 -7670 450 208 2198 180 5 11 chr2 138179671 138180044 -115076539 - LOR1a-int LTR ERV1 -7749 371 1 1199 133 0 6 chr2 138180044 138180217 -115076366 - LOR1a LTR ERV1 0 497 326 1503 118 89 8 chr2 138180221 138180458 -115076125 + MER44D DNA MER2_type 292 602 -3 1783 153 121 62 chr2 138181683 138182120 -115074463 - MER31B LTR ERV1 -3 463 1 1366 84 0 0 chr2 138182918 138183085 -115073498 - AluSc SINE Alu -11 298 132 2180 87 0 0 chr2 138183085 138183360 -115073223 - AluYa5 SINE Alu -1 310 36 275 376 28 0 chr2 138183583 138183724 -115072859 - MIR SINE MIR -98 164 20 902 204 56 10 chr2 138185203 138185399 -115071184 + L1MB7 LINE L1 5933 6137 -47 396 279 87 0 chr2 138185452 138185556 -115071027 + MER81 DNA DNA 2 114 0 325 319 11 76 chr2 138185624 138185809 -115070774 - MIR SINE MIR -70 192 20 6483 156 18 13 chr2 138187139 138187494 -115069089 - L1PB1 LINE L1 -1 6150 5798 186 43 0 0 chr2 138187494 138187517 -115069066 + (TG)n Simple_repeat Simple_repeat 2 24 0 6483 156 18 13 chr2 138187517 138188897 -115067686 - L1PB1 LINE L1 -353 5798 4404 234 0 0 0 chr2 138188897 138188923 -115067660 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 6483 156 18 13 chr2 138188923 138189386 -115067197 - L1PB1 LINE L1 -1747 4404 3945 2119 112 20 7 chr2 138190009 138190304 -115066279 + AluSx SINE Alu 1 299 -13 245 247 33 100 chr2 138190344 138190494 -115066089 + MER102b DNA MER1_type 196 335 -6 195 42 0 0 chr2 138191557 138191581 -115065002 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 214 167 0 0 chr2 138191602 138191638 -115064945 + GA-rich Low_complexity Low_complexity 1 36 0 1883 158 0 10 chr2 138191774 138192077 -115064506 + AluSx SINE Alu 1 300 -12 391 312 113 23 chr2 138192370 138192636 -115063947 + MLT1L LTR MaLR 268 557 -58 506 164 82 129 chr2 138192733 138192904 -115063679 - MER63A DNA MER1_type 0 210 48 4358 168 23 8 chr2 138193019 138194294 -115062289 - L1MA9 LINE L1 -281 6031 4735 322 216 14 129 chr2 138194394 138194533 -115062050 + L1MA9 LINE L1 6142 6264 -48 1018 126 5 5 chr2 138194538 138194745 -115061838 + (GGAA)n Simple_repeat Simple_repeat 1 207 0 2232 103 0 10 chr2 138196418 138196720 -115059863 - AluSc SINE Alu -10 299 1 753 175 0 0 chr2 138196754 138196898 -115059685 + FLAM_C SINE Alu 1 144 0 2921 96 0 5 chr2 138197044 138197440 -115059143 - L1PA8A LINE L1 -13 6118 5725 244 150 0 0 chr2 138197519 138197559 -115059024 + MLT1G1 LTR MaLR 1 40 -555 1008 247 144 74 chr2 138197620 138198146 -115058437 + MLT1G1 LTR MaLR 33 595 0 240 281 292 0 chr2 138198295 138198391 -115058192 - L2 LINE L2 0 3272 3149 193 342 0 13 chr2 138198454 138198530 -115058053 + L2 LINE L2 2990 3064 -208 884 219 36 78 chr2 138198559 138198778 -115057805 - MER63A DNA MER1_type 0 210 1 998 181 37 47 chr2 138199278 138199493 -115057090 + MLT1B LTR MaLR 5 217 -173 216 0 0 0 chr2 138199510 138199534 -115057049 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 314 238 0 0 chr2 138199534 138199597 -115056986 - MER58A DNA MER1_type -42 65 3 447 247 53 71 chr2 138199599 138199769 -115056814 + LTR16A LTR ERVL 25 191 -259 226 171 66 53 chr2 138199949 138200025 -115056558 + L1M3b LINE L1 1650 1726 -4555 1874 254 77 58 chr2 138200102 138200815 -115055768 - MER21B LTR ERV1 -124 739 13 1886 136 0 0 chr2 138200824 138201088 -115055495 + AluSx SINE Alu 49 312 0 28 33 0 0 chr2 138201088 138201118 -115055465 + AT_rich Low_complexity Low_complexity 1 30 0 245 300 93 7 chr2 138201152 138201292 -115055291 + MIR SINE MIR 105 256 -6 1488 180 75 48 chr2 138201862 138202056 -115054527 - MER2 DNA MER2_type -2 343 135 3548 135 0 22 chr2 138202056 138202595 -115053988 + MER1A DNA MER1_type 1 527 0 1488 180 75 48 chr2 138202595 138202733 -115053850 - MER2 DNA MER2_type -210 135 2 1979 144 0 7 chr2 138203343 138203635 -115052948 + AluSg SINE Alu 12 301 -9 895 149 6 29 chr2 138206090 138206264 -115050319 - L1 LINE L1 -1579 4567 4398 754 119 0 0 chr2 138206289 138206390 -115050193 - U6 snRNA snRNA -6 101 1 277 140 0 0 chr2 138206390 138206440 -115050143 - L1 LINE L1 -1732 4414 4365 672 296 35 19 chr2 138206715 138206972 -115049611 - MIR SINE MIR 0 262 2 591 251 209 0 chr2 138207008 138207199 -115049384 - MIR SINE MIR -27 235 5 435 173 0 0 chr2 138208131 138208212 -115048371 + GA-rich Low_complexity Low_complexity 1 81 0 260 227 62 62 chr2 138208466 138208563 -115048020 + 7SK RNA RNA 2 98 -95 1930 262 60 12 chr2 138208909 138209562 -115047021 - L1ME3A LINE L1 -223 6016 5328 259 176 206 0 chr2 138209588 138209656 -115046927 - MER63 DNA MER1_type -1 1061 980 381 209 121 22 chr2 138209658 138209749 -115046834 - MER63 DNA MER1_type -85 751 26 878 292 62 3 chr2 138209764 138210089 -115046494 - L1ME3A LINE L1 -1241 4974 4631 2513 122 6 3 chr2 138210216 138210577 -115046006 - THE1B LTR MaLR -2 362 1 1423 167 34 7 chr2 138210667 138210722 -115045861 - MER33 DNA MER1_type -2283 302 250 2273 113 7 0 chr2 138210722 138211024 -115045559 + AluSx SINE Alu 1 304 -8 1423 167 34 7 chr2 138211024 138211262 -115045321 - MER33 DNA MER1_type -2335 250 1 757 258 35 97 chr2 138211354 138211789 -115044794 - L1ME3A LINE L1 -5829 567 160 494 218 89 16 chr2 138211888 138212012 -115044571 + FLAM_A SINE Alu 1 133 0 240 344 7 7 chr2 138212128 138212279 -115044304 - L1M4 LINE L1 -3103 3043 2893 27 29 0 0 chr2 138212534 138212568 -115044015 + AT_rich Low_complexity Low_complexity 1 34 0 240 35 0 0 chr2 138212568 138212597 -115043986 + (TG)n Simple_repeat Simple_repeat 2 30 0 307 202 193 53 chr2 138213327 138213441 -115043142 + MIR SINE MIR 118 247 -15 267 31 0 0 chr2 138213562 138213594 -115042989 + (TG)n Simple_repeat Simple_repeat 2 33 0 2260 77 0 7 chr2 138214164 138214449 -115042134 + AluSq SINE Alu 1 283 -30 214 290 16 16 chr2 138214534 138214596 -115041987 + MIR SINE MIR 18 79 -183 1419 194 100 9 chr2 138214601 138214941 -115041642 - L1MA9 LINE L1 -33 6279 5909 276 88 35 105 chr2 138215140 138215197 -115041386 + MER20 DNA MER1_type 22 74 -145 22 0 0 0 chr2 138221903 138221925 -115034658 + AT_rich Low_complexity Low_complexity 1 22 0 960 189 63 46 chr2 138222771 138223009 -115033574 - MLT1B LTR MaLR -148 242 1 244 225 113 0 chr2 138223354 138223425 -115033158 + L2 LINE L2 3235 3313 0 1419 226 86 49 chr2 138225039 138225573 -115031010 + MLT1E3 LTR MaLR 1 502 -3 643 100 18 0 chr2 138226587 138226697 -115029886 + (TA)n Simple_repeat Simple_repeat 2 113 0 2200 76 28 17 chr2 138226701 138226992 -115029591 - AluY SINE Alu -17 294 1 823 244 6 0 chr2 138227236 138227392 -115029191 - FAM SINE Alu -18 157 1 416 111 37 0 chr2 138227408 138227516 -115029067 + (TA)n Simple_repeat Simple_repeat 2 113 0 418 243 22 37 chr2 138228070 138228206 -115028377 + MER5A DNA MER1_type 10 143 -46 698 326 25 12 chr2 138228901 138229143 -115027440 + LTR67 LTR ERVL 2 246 -311 626 205 96 6 chr2 138229716 138229872 -115026711 + MER5B DNA MER1_type 3 172 -6 225 254 24 79 chr2 138229938 138230064 -115026519 - LTR67 LTR ERVL -7 550 432 1714 235 35 45 chr2 138231335 138231630 -115024953 - MLT1D LTR MaLR 0 505 216 1909 185 28 6 chr2 138231630 138231987 -115024596 - MLT1A1 LTR MaLR 0 365 1 1714 235 35 45 chr2 138231987 138232201 -115024382 - MLT1D LTR MaLR -289 216 1 294 315 133 6 chr2 138232296 138232461 -115024122 + MIR SINE MIR 52 237 -25 4352 140 68 7 chr2 138232477 138233239 -115023344 + Tigger2 DNA MER2_type 1 809 -1909 266 397 27 0 chr2 138233413 138233640 -115022943 + GA-rich Low_complexity Low_complexity 1 233 0 265 151 0 67 chr2 138233693 138233812 -115022771 + (TA)n Simple_repeat Simple_repeat 1 111 0 308 176 23 53 chr2 138233859 138233990 -115022593 + (TATATG)n Simple_repeat Simple_repeat 2 128 0 669 287 26 49 chr2 138234011 138234276 -115022307 - MIR SINE MIR -2 260 2 487 285 79 36 chr2 138235266 138235571 -115021012 + L2 LINE L2 2995 3312 -1 1346 238 92 91 chr2 138237986 138238537 -115018046 - L1MEd LINE L1 -4866 1253 795 14660 136 20 25 chr2 138238537 138240968 -115015615 + Tigger1 DNA MER2_type 1 2418 0 1346 238 92 91 chr2 138240968 138241412 -115015171 - L1MEd LINE L1 -5324 795 353 304 278 61 56 chr2 138242413 138242593 -115013990 + HERVL LTR ERVL 3283 3463 -2191 837 264 83 0 chr2 138242843 138243059 -115013524 - MIR SINE MIR -27 235 2 326 244 26 13 chr2 138243464 138243542 -115013041 + MLT1H LTR MaLR 97 175 -374 2339 148 40 22 chr2 138245610 138246055 -115010528 - L1MB2 LINE L1 0 6171 5719 431 89 0 0 chr2 138246065 138246121 -115010462 - L1MB2 LINE L1 -606 5577 5522 * 2047 150 12 3 chr2 138246120 138246446 -115010137 - L1M3 LINE L1 -442 5729 5401 207 351 80 76 chr2 138246670 138246921 -115009662 + L2 LINE L2 3016 3267 -5 246 254 0 0 chr2 138247728 138247783 -115008800 - L2 LINE L2 -8 3264 3210 272 262 119 48 chr2 138248314 138248482 -115008101 - MER58A DNA MER1_type -19 205 26 1213 181 5 0 chr2 138248510 138248715 -115007868 - AluJb SINE Alu -22 290 85 2611 74 0 0 chr2 138249421 138249730 -115006853 - AluSx SINE Alu -3 309 1 410 189 22 22 chr2 138249930 138250020 -115006563 + LTR40b LTR ERVL 373 462 0 2252 337 83 49 chr2 138250332 138253839 -115002744 + HERVL LTR ERVL 393 3992 -1662 1302 326 68 42 chr2 138253948 138254752 -115001831 + HERVL LTR ERVL 4175 4999 -765 422 265 148 30 chr2 138255487 138255824 -115000759 + L2 LINE L2 2717 3090 -223 2081 163 3 0 chr2 138258541 138258866 -114997717 - L1PA16 LINE L1 0 6166 5841 300 256 0 0 chr2 138260120 138260202 -114996381 - L1ME4a LINE L1 0 6121 6040 296 314 149 23 chr2 138260214 138260443 -114996140 - MIR SINE MIR -4 258 3 1777 276 33 27 chr2 138261297 138261848 -114994735 - MER68 LTR ERV1 -8 554 1 1020 257 120 48 chr2 138262030 138262446 -114994137 + MLT1H LTR MaLR 102 547 -2 351 367 34 11 chr2 138262840 138263104 -114993479 + L2 LINE L2 3044 3313 0 736 261 44 30 chr2 138263275 138263478 -114993105 - MIR SINE MIR -38 224 19 2991 196 14 4 chr2 138263580 138264094 -114992489 + LTR53 LTR ERVL 1 519 0 237 280 43 65 chr2 138265887 138265980 -114990603 + MIR3 SINE MIR 83 173 -35 363 23 0 0 chr2 138267665 138267709 -114988874 + (CA)n Simple_repeat Simple_repeat 2 45 0 23 54 0 0 chr2 138267815 138267852 -114988731 + AT_rich Low_complexity Low_complexity 1 37 0 34295 87 62 7 chr2 138267899 138273707 -114982876 + L1PA6 LINE L1 13 6148 -6 213 271 23 53 chr2 138273710 138273843 -114982740 + GA-rich Low_complexity Low_complexity 5 133 0 973 266 115 25 chr2 138273955 138274433 -114982150 + HAL1b LINE L1 313 833 -515 800 289 25 0 chr2 138274713 138274948 -114981635 - L2 LINE L2 0 3313 3073 252 0 0 0 chr2 138275024 138275052 -114981531 + (CA)n Simple_repeat Simple_repeat 1 28 0 2188 111 3 25 chr2 138276656 138276995 -114979588 + AluSg SINE Alu 1 310 0 1604 198 72 44 chr2 138277886 138278341 -114978242 + MER110A LTR ERV1 1 468 0 200 283 101 0 chr2 138278940 138279039 -114977544 + L2 LINE L2 3199 3307 -6 442 349 0 8 chr2 138279658 138279784 -114976799 + L2 LINE L2 3148 3272 0 311 349 48 16 chr2 138279848 138279974 -114976609 + L2 LINE L2 3125 3254 -18 269 136 23 0 chr2 138281630 138281674 -114974909 + Alu SINE Alu 2 46 -257 453 128 0 46 chr2 138282045 138282154 -114974429 + (TA)n Simple_repeat Simple_repeat 2 105 0 342 355 117 25 chr2 138282167 138282491 -114974092 - L2 LINE L2 -813 2501 2148 205 379 48 18 chr2 138282517 138282744 -114973839 - L2 LINE L2 -1320 1994 1761 301 227 50 59 chr2 138282940 138283059 -114973524 + L2 LINE L2 3173 3290 -23 235 164 33 0 chr2 138284372 138284433 -114972150 + CT-rich Low_complexity Low_complexity 5 67 0 21 0 0 0 chr2 138286687 138286708 -114969875 + AT_rich Low_complexity Low_complexity 1 21 0 14504 177 27 16 chr2 138286708 138288443 -114968140 - L1PB1 LINE L1 0 6867 5152 189 0 0 0 chr2 138288443 138288464 -114968119 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 14504 177 27 16 chr2 138288464 138292689 -114963894 - L1PB1 LINE L1 -1715 5152 637 898 195 11 16 chr2 138292695 138292880 -114963703 - L1PB1 LINE L1 -6668 195 12 21 0 0 0 chr2 138293422 138293443 -114963140 + AT_rich Low_complexity Low_complexity 1 21 0 1352 178 13 4 chr2 138293666 138293896 -114962687 - MSTC LTR MaLR 0 428 197 6559 136 11 13 chr2 138293915 138295114 -114961469 - L1MA4A LINE L1 -9 6294 5096 2511 119 44 8 chr2 138295114 138295476 -114961107 - THE1C LTR MaLR 0 375 1 6559 136 11 13 chr2 138295476 138295531 -114961052 - L1MA4A LINE L1 -1207 5096 5042 1429 90 50 0 chr2 138295637 138295838 -114960745 - MSTC LTR MaLR -217 211 1 21 0 0 0 chr2 138295851 138295872 -114960711 + AT_rich Low_complexity Low_complexity 1 21 0 12051 115 34 15 chr2 138296490 138298330 -114958253 + Tigger2 DNA MER2_type 844 2718 0 241 281 137 55 chr2 138298359 138298505 -114958078 + MIR3 SINE MIR 18 175 -33 207 218 59 69 chr2 138299483 138299584 -114956999 + MIR SINE MIR 107 206 -56 * 879 246 40 28 chr2 138299577 138299829 -114956754 - MIR SINE MIR -1 261 7 432 244 70 61 chr2 138299848 138300061 -114956522 + MER112 DNA MER1_type 33 247 -13 214 240 320 0 chr2 138300534 138300609 -114955974 + MIR SINE MIR 22 120 -142 823 182 0 0 chr2 138300994 138301126 -114955457 - FLAM_A SINE Alu 0 142 11 180 0 0 0 chr2 138301277 138301297 -114955286 + (T)n Simple_repeat Simple_repeat 1 20 0 415 134 205 27 chr2 138301297 138301409 -114955174 + MER58C DNA MER1_type 79 210 -5 21 0 0 0 chr2 138301966 138301987 -114954596 + AT_rich Low_complexity Low_complexity 1 21 0 296 172 11 115 chr2 138303064 138303151 -114953432 + MIR SINE MIR 14 91 -171 24 0 0 0 chr2 138303448 138303472 -114953111 + AT_rich Low_complexity Low_complexity 1 24 0 2511 200 144 19 chr2 138305142 138305863 -114950720 + Zaphod DNA AcHobo 165 975 -3056 1607 183 50 31 chr2 138305862 138306016 -114950567 + Zaphod DNA AcHobo 3607 3757 -274 * 2359 155 14 0 chr2 138306016 138306377 -114950206 + MER47A DNA MER2_type 1 366 0 1607 183 50 31 chr2 138306377 138306491 -114950092 + Zaphod DNA AcHobo 3757 3867 -164 1929 133 0 17 chr2 138306491 138306785 -114949798 + AluJb SINE Alu 1 289 -23 1607 183 50 31 chr2 138306785 138306898 -114949685 + Zaphod DNA AcHobo 3867 3996 -35 1027 275 28 7 chr2 138307002 138307289 -114949294 - AluJo SINE Alu -8 294 2 951 264 107 101 chr2 138309119 138309743 -114946840 - MER21B LTR ERV1 -212 651 24 306 276 46 0 chr2 138311094 138311181 -114945402 + MIR SINE MIR 84 174 -88 2655 184 24 17 chr2 138311680 138312147 -114944436 - MER70A LTR ERVL 0 472 3 32 43 0 0 chr2 138312846 138312892 -114943691 + AT_rich Low_complexity Low_complexity 1 46 0 571 258 16 58 chr2 138313185 138313375 -114943208 - MIR SINE MIR 0 262 81 648 267 70 13 chr2 138313993 138314208 -114942375 + MIR SINE MIR 18 236 -26 821 241 254 29 chr2 138314381 138314767 -114941816 - MLT1H1 LTR MaLR -8 547 75 1544 60 5 0 chr2 138314775 138314960 -114941623 + AluY SINE Alu 105 290 -21 1035 190 9 19 chr2 138315209 138315420 -114941163 - AluJb SINE Alu -20 292 84 362 230 60 40 chr2 138316825 138316925 -114939658 + L2 LINE L2 3204 3305 -8 1788 217 243 18 chr2 138316997 138317564 -114939019 + MER39 LTR ERV1 10 704 -3 262 259 17 0 chr2 138318270 138318328 -114938255 + L2 LINE L2 3214 3272 0 217 232 43 14 chr2 138318334 138318403 -114938180 + GA-rich Low_complexity Low_complexity 5 75 0 264 282 101 86 chr2 138318453 138318839 -114937744 + L1MC4a LINE L1 5711 6102 -1706 1395 167 29 28 chr2 138320137 138320456 -114936127 - MER33 DNA MER1_type -12 312 1 611 280 88 21 chr2 138321325 138321564 -114935019 + L2 LINE L2 2622 2876 -438 256 333 0 0 chr2 138321838 138321907 -114934676 + L2 LINE L2 3234 3302 -11 411 256 8 48 chr2 138322399 138322524 -114934059 - MLT1J LTR MaLR 0 511 392 224 261 43 43 chr2 138322853 138322991 -114933592 + L2 LINE L2 3113 3250 -63 505 306 35 25 chr2 138323952 138324151 -114932432 - MIR SINE MIR -29 233 33 389 292 100 0 chr2 138324976 138325106 -114931477 + MIR SINE MIR 50 192 -70 1056 89 8 191 chr2 138325106 138325342 -114931241 + 7SK RNA RNA 1 193 0 1218 158 16 0 chr2 138325416 138325600 -114930983 + MER5A DNA MER1_type 1 187 -2 25 0 0 0 chr2 138326227 138326252 -114930331 + AT_rich Low_complexity Low_complexity 1 25 0 232 266 211 16 chr2 138326714 138326842 -114929741 + MIR SINE MIR 22 174 -88 1141 240 75 7 chr2 138327517 138327809 -114928774 + MER46C DNA MER2_type 27 338 0 6791 87 45 12 chr2 138328431 138329382 -114927201 - L1PA8 LINE L1 -3 6169 5154 185 0 40 0 chr2 138329382 138329407 -114927176 + (TTTTG)n Simple_repeat Simple_repeat 1 26 0 6791 87 45 12 chr2 138329407 138330134 -114926449 - L1PA8 LINE L1 -1018 5154 4452 291 140 0 0 chr2 138330147 138330197 -114926386 + (T)n Simple_repeat Simple_repeat 1 50 0 355 245 151 6 chr2 138331457 138331616 -114924967 + L1MCc LINE L1 25 206 -6217 244 300 0 0 chr2 138331673 138331733 -114924850 + L1MCc LINE L1 609 668 -5754 284 308 94 40 chr2 138332034 138332556 -114924027 + L1MCc LINE L1 816 1365 -5058 3995 174 7 19 chr2 138332896 138333616 -114922967 - MER50 LTR ERV1 -23 711 1 790 254 133 39 chr2 138334050 138334380 -114922203 + MLT1A1 LTR MaLR 1 361 -4 322 268 39 24 chr2 138334405 138334532 -114922051 - MLT1A2 LTR MaLR -15 359 231 242 196 0 20 chr2 138334728 138334779 -114921804 - MLT1A2 LTR MaLR -319 55 6 572 269 114 97 chr2 138335314 138335901 -114920682 + L2 LINE L2 1937 2533 -781 491 307 174 25 chr2 138335952 138336472 -114920111 + L2 LINE L2 2696 3283 -30 277 200 46 15 chr2 138336493 138336558 -114920025 + MER69 DNA AcHobo 1 67 -2459 395 264 36 14 chr2 138336707 138336847 -114919736 + MER69 DNA AcHobo 2380 2522 -4 29 32 0 48 chr2 138337149 138337211 -114919372 + AT_rich Low_complexity Low_complexity 1 59 0 1042 176 78 135 chr2 138337630 138337949 -114918634 + AluJb SINE Alu 1 301 -1 710 309 75 25 chr2 138339149 138339469 -114917114 - MER102b DNA MER1_type -4 337 2 1035 190 9 19 chr2 138339911 138340122 -114916461 + AluJb SINE Alu 84 292 -20 1361 87 16 0 chr2 138340371 138340554 -114916029 - AluY SINE Alu -21 290 105 293 246 51 34 chr2 138340562 138340680 -114915903 + MLT1H1 LTR MaLR 75 194 -361 526 235 74 43 chr2 138340792 138340954 -114915629 + MLT1H1 LTR MaLR 381 547 -8 648 267 70 13 chr2 138341127 138341342 -114915241 - MIR SINE MIR -26 236 18 562 250 16 68 chr2 138341963 138342155 -114914428 + MIR SINE MIR 81 262 0 23 0 0 0 chr2 138342462 138342485 -114914098 + AT_rich Low_complexity Low_complexity 1 23 0 816 286 9 0 chr2 138342755 138342986 -114913597 - L1 LINE L1 -1800 4346 4114 343 251 29 0 chr2 138343334 138343509 -114913074 + (TA)n Simple_repeat Simple_repeat 1 180 0 426 233 17 33 chr2 138345023 138345143 -114911440 + MER5A DNA MER1_type 4 121 -68 322 260 0 13 chr2 138345898 138345975 -114910608 + GA-rich Low_complexity Low_complexity 6 81 0 322 340 13 72 chr2 138347865 138348256 -114908327 + L2 LINE L2 2934 3301 -12 22 0 0 0 chr2 138348581 138348603 -114907980 + AT_rich Low_complexity Low_complexity 1 22 0 1996 113 0 0 chr2 138349696 138349962 -114906621 - AluSx SINE Alu -46 266 1 22 65 0 0 chr2 138351322 138351353 -114905230 + AT_rich Low_complexity Low_complexity 1 31 0 186 71 0 0 chr2 138352390 138352418 -114904165 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 238 53 0 79 chr2 138352522 138352560 -114904023 + HSMAR1 DNA Mariner 1 35 -1252 1289 140 0 5 chr2 138353010 138353210 -114903373 + AluSg/x SINE Alu 105 303 -9 8220 205 31 30 chr2 138353212 138355269 -114901314 - L1 LINE L1 -985 5161 3103 288 70 0 0 chr2 138356532 138356575 -114900008 + (TG)n Simple_repeat Simple_repeat 2 44 0 189 288 34 51 chr2 138357762 138357880 -114898703 + L3 LINE CR1 786 901 -676 827 291 55 23 chr2 138358062 138358405 -114898178 + L1MCb LINE L1 1 354 -5691 1063 152 11 0 chr2 138359806 138359984 -114896599 - L1P3 LINE L1 -1728 4733 4554 43390 42 7 8 chr2 138360018 138366177 -114890406 + L1PA4 LINE L1 1 6155 0 19773 148 29 27 chr2 138366176 138369443 -114887140 - L1P3 LINE L1 -1922 4539 1235 * 272 70 23 0 chr2 138369443 138369486 -114887097 + (TTG)n Simple_repeat Simple_repeat 2 45 0 19773 148 29 27 chr2 138369486 138370724 -114885859 - L1P3 LINE L1 -5226 1235 2 414 255 45 64 chr2 138370766 138370923 -114885660 - MLT1H1 LTR MaLR 0 555 402 456 264 60 42 chr2 138370926 138371093 -114885490 - MLT1G1 LTR MaLR -414 181 12 2099 150 0 3 chr2 138372289 138372602 -114883981 - AluSx SINE Alu 0 312 1 1937 152 35 17 chr2 138373030 138373383 -114883200 - MLT1A1 LTR MaLR 0 365 1 300 286 0 0 chr2 138373392 138373476 -114883107 + MIR SINE MIR 179 262 0 364 336 8 8 chr2 138373573 138373704 -114882879 + MIR3 SINE MIR 48 178 -30 512 273 159 37 chr2 138374002 138374272 -114882311 + MLT1J LTR MaLR 21 357 -154 3007 114 91 9 chr2 138374272 138374735 -114881848 - MER61D LTR ERV1 0 501 1 512 273 159 37 chr2 138374735 138374867 -114881716 + MLT1J LTR MaLR 357 472 -39 1463 180 16 4 chr2 138374959 138375214 -114881369 - LTR39 LTR ERV1 0 783 526 * 1717 166 51 59 chr2 138375203 138375577 -114881006 - LTR39 LTR ERV1 -384 399 29 345 243 50 71 chr2 138375713 138375853 -114880730 - LTR27 LTR ERV1 0 636 500 2224 160 37 11 chr2 138375923 138376412 -114880171 - LTR28 LTR ERV1 -130 506 1 296 24 0 24 chr2 138376887 138376929 -114879654 + (TG)n Simple_repeat Simple_repeat 2 42 0 425 206 199 15 chr2 138376953 138377089 -114879494 - MER5A DNA MER1_type -6 183 23 650 186 21 7 chr2 138377401 138377541 -114879042 - MER5A DNA MER1_type 0 189 48 257 257 162 22 chr2 138377424 138377560 -114879023 + MER5A DNA MER1_type 35 189 0 * 333 0 0 0 chr2 138378092 138378129 -114878454 + (A)n Simple_repeat Simple_repeat 1 37 0 450 283 62 7 chr2 138379890 138380035 -114876548 + MIR SINE MIR 62 214 -48 2319 90 0 3 chr2 138380777 138381067 -114875516 + AluSc SINE Alu 1 289 -20 368 267 40 10 chr2 138381921 138382022 -114874561 - MIR3 SINE MIR -12 196 93 360 287 131 65 chr2 138382304 138382625 -114873958 - MLT1J LTR MaLR -19 492 151 370 85 0 0 chr2 138383237 138383284 -114873299 - MLT2C1 LTR ERVL 0 397 351 1367 157 48 51 chr2 138383286 138383476 -114873107 - MER2 DNA MER2_type 0 345 155 2278 140 79 2 chr2 138383476 138383870 -114872713 + MSTA LTR MaLR 5 428 0 1367 157 48 51 chr2 138383870 138383972 -114872611 - MER2 DNA MER2_type -190 155 54 198 103 0 0 chr2 138384069 138384098 -114872485 + (TG)n Simple_repeat Simple_repeat 2 30 0 235 130 0 0 chr2 138384098 138384144 -114872439 + LTR66 LTR ERVL 394 439 -171 363 223 0 0 chr2 138384146 138384223 -114872360 + (TA)n Simple_repeat Simple_repeat 2 81 -14 1703 116 83 22 chr2 138384223 138384500 -114872083 - AluSx SINE Alu -18 294 1 363 223 0 0 chr2 138384500 138384516 -114872067 + (TA)n Simple_repeat Simple_repeat 80 95 0 299 58 0 135 chr2 138384525 138384577 -114872006 - MER2 DNA MER2_type -289 56 12 246 219 0 0 chr2 138384580 138384644 -114871939 + L1MC4 LINE L1 6640 6703 -1339 408 169 11 11 chr2 138384644 138384733 -114871850 + (TA)n Simple_repeat Simple_repeat 2 90 0 290 307 110 0 chr2 138384756 138384883 -114871700 - L2 LINE L2 -8 3264 3124 203 304 200 0 chr2 138385669 138385794 -114870789 + MIR SINE MIR 57 206 -56 2176 88 3 11 chr2 138386253 138386537 -114870046 - AluSc SINE Alu -14 295 14 1913 232 93 6 chr2 138386571 138387063 -114869520 - MLT1F LTR MaLR -7 535 1 960 221 6 0 chr2 138387204 138387385 -114869198 - MER5A DNA MER1_type -7 182 1 521 170 110 0 chr2 138387581 138387681 -114868902 + MER63 DNA MER1_type 2 738 -324 280 222 83 14 chr2 138387691 138387763 -114868820 + MER63 DNA MER1_type 986 1062 0 2062 122 0 20 chr2 138388340 138388634 -114867949 + AluSx SINE Alu 1 288 -24 798 223 198 87 chr2 138388877 138388904 -114867679 - LTR21A LTR ERV1 -17 488 465 234 0 0 0 chr2 138388904 138388930 -114867653 + (GA)n Simple_repeat Simple_repeat 1 26 0 798 223 198 87 chr2 138388930 138389341 -114867242 - LTR21A LTR ERV1 -40 465 1 354 273 58 0 chr2 138389522 138389643 -114866940 + MIR SINE MIR 97 224 -38 188 271 100 29 chr2 138390942 138391082 -114865501 - L2 LINE L2 -236 3036 2887 289 263 12 12 chr2 138391142 138391222 -114865361 - MER5A DNA MER1_type -80 109 30 228 35 0 0 chr2 138392222 138392251 -114864332 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2000 130 0 27 chr2 138392255 138392555 -114864028 - AluSg SINE Alu -18 292 1 227 184 0 0 chr2 138392828 138392866 -114863717 + MER5B DNA MER1_type 3 40 -138 1703 226 70 48 chr2 138392876 138392915 -114863668 - MLT2B1 LTR ERVL -10 510 473 261 0 0 0 chr2 138392915 138392944 -114863639 + (CA)n Simple_repeat Simple_repeat 2 30 0 1703 226 70 48 chr2 138392944 138393403 -114863180 - MLT2B1 LTR ERVL -47 473 1 624 227 7 21 chr2 138393403 138393544 -114863039 + MER5B DNA MER1_type 40 178 0 341 309 23 78 chr2 138393544 138393758 -114862825 + L2 LINE L2 2644 2845 -469 184 355 114 24 chr2 138393806 138393972 -114862611 + L2 LINE L2 2911 3091 -181 748 160 231 0 chr2 138394664 138394820 -114861763 + AluJo SINE Alu 2 193 -119 597 216 5 116 chr2 138394972 138395171 -114861412 + MER5B DNA MER1_type 1 177 -1 504 173 119 77 chr2 138395183 138395351 -114861232 - MER5B DNA MER1_type -3 175 1 266 135 39 0 chr2 138396398 138396450 -114860133 + (TATATG)n Simple_repeat Simple_repeat 6 59 0 235 130 0 0 chr2 138396450 138396496 -114860087 - LTR66 LTR ERVL -171 439 394 198 103 0 0 chr2 138396496 138396525 -114860058 + (CA)n Simple_repeat Simple_repeat 2 30 0 1253 155 47 64 chr2 138396622 138396724 -114859859 + MER2 DNA MER2_type 54 156 -189 2072 159 84 0 chr2 138396724 138397115 -114859468 - MSTA LTR MaLR 0 428 5 1253 155 47 64 chr2 138397115 138397309 -114859274 + MER2 DNA MER2_type 156 345 0 370 85 0 0 chr2 138397311 138397358 -114859225 + MLT2C1 LTR ERVL 351 397 0 196 328 69 0 chr2 138400415 138400546 -114856037 - L2 LINE L2 -1391 1923 1784 207 227 0 30 chr2 138400791 138400857 -114855726 + GA-rich Low_complexity Low_complexity 1 64 0 1698 201 18 9 chr2 138401013 138401341 -114855242 + MER4D LTR ERV1 547 877 -26 2052 136 3 0 chr2 138401347 138401649 -114854934 - AluSx SINE Alu -9 303 1 1985 191 37 66 chr2 138403035 138403523 -114853060 + LTR1 LTR ERV1 293 766 -19 4863 138 4 6 chr2 138403716 138404504 -114852079 - L1P LINE L1 -1146 5000 4215 4132 79 28 4 chr2 138404514 138405059 -114851524 + L1P LINE L1 1 558 -5588 199 267 117 0 chr2 138406307 138406367 -114850216 + L2 LINE L2 3247 3313 0 7994 17 0 0 chr2 138407290 138408336 -114848247 + L1PA2 LINE L1 5108 6155 0 458 205 12 130 chr2 138408500 138408617 -114847966 + MER5B DNA MER1_type 15 110 -68 2099 112 6 6 chr2 138408617 138408929 -114847654 + AluSx SINE Alu 1 312 0 458 205 12 130 chr2 138408929 138408972 -114847611 + MER5B DNA MER1_type 110 156 -22 6413 158 72 31 chr2 138409364 138410055 -114846528 + L1 LINE L1 2850 3512 -2634 1267 181 49 0 chr2 138410055 138410281 -114846302 - L1PB3 LINE L1 -10 6144 5908 6413 158 72 31 chr2 138410281 138410985 -114845598 + L1 LINE L1 3512 4301 -1845 878 270 153 27 chr2 138411302 138411780 -114844803 - MLT1G3 LTR MaLR -2 528 73 7384 40 6 3 chr2 138412562 138414047 -114842536 + L1PA4 LINE L1 4664 6155 0 4796 130 22 7 chr2 138414049 138414809 -114841774 - L1P LINE L1 -1925 4221 3450 233 296 96 15 chr2 138415717 138415852 -114840731 - L2 LINE L2 -185 3087 2942 349 256 211 8 chr2 138415904 138416037 -114840546 - MER5A DNA MER1_type 0 189 30 228 35 0 0 chr2 138417033 138417062 -114839521 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1788 130 3 30 chr2 138417066 138417365 -114839218 - AluSg SINE Alu -19 291 1 313 285 125 52 chr2 138417674 138417962 -114838621 + L1M2 LINE L1 669 977 -5872 303 326 0 0 chr2 138418063 138418149 -114838434 - L1M LINE L1 -2469 5339 5254 223 294 111 24 chr2 138418267 138418393 -114838190 + MIR SINE MIR 16 152 -110 423 78 0 0 chr2 138420324 138420388 -114836195 + (CA)n Simple_repeat Simple_repeat 2 65 0 359 279 205 76 chr2 138421100 138421602 -114834981 - MLT1K LTR MaLR -2 586 20 500 306 140 13 chr2 138422587 138423044 -114833539 - L1ME4a LINE L1 -199 5922 5255 1062 181 0 21 chr2 138423046 138423239 -114833344 + AluSx SINE Alu 1 189 -123 342 67 0 0 chr2 138423465 138423510 -114833073 + (CA)n Simple_repeat Simple_repeat 2 46 0 377 229 221 18 chr2 138423817 138423955 -114832628 + MIR SINE MIR 3 167 -95 752 282 18 23 chr2 138424076 138424296 -114832287 - MIR SINE MIR -30 232 14 1664 168 23 0 chr2 138424731 138425034 -114831549 + AluSx SINE Alu 1 310 -2 316 289 83 46 chr2 138425455 138425673 -114830910 - L1M2 LINE L1 -5847 1002 777 227 211 39 0 chr2 138426591 138426643 -114829940 + (TGGA)n Simple_repeat Simple_repeat 3 56 0 360 209 118 36 chr2 138426998 138427108 -114829475 + MIR3 SINE MIR 88 206 -2 1222 171 105 46 chr2 138428481 138428785 -114827798 + MER33 DNA MER1_type 3 324 0 368 189 65 139 chr2 138428936 138429137 -114827446 + MIR SINE MIR 77 262 0 22 0 0 0 chr2 138429685 138429707 -114826876 + GC_rich Low_complexity Low_complexity 1 22 0 965 161 22 6 chr2 138430357 138430537 -114826046 + MER5A DNA MER1_type 7 189 0 285 350 26 0 chr2 138430737 138430854 -114825729 + CT-rich Low_complexity Low_complexity 6 125 0 263 285 183 7 chr2 138432192 138432329 -114824254 - MIR3 SINE MIR 0 208 48 2757 160 39 4 chr2 138432755 138433273 -114823310 + L1MA5 LINE L1 5760 6295 -5 298 273 102 34 chr2 138434321 138434526 -114822057 - L2 LINE L2 -231 3041 2823 769 280 43 43 chr2 138434534 138434791 -114821792 - MIR SINE MIR 0 262 6 324 308 41 41 chr2 138435820 138435966 -114820617 + MIR SINE MIR 79 224 -38 269 330 240 0 chr2 138436442 138436642 -114819941 - L2 LINE L2 -9 3263 3016 280 293 216 9 chr2 138436801 138436917 -114819666 - MER5A DNA MER1_type -3 186 47 197 324 59 0 chr2 138437146 138437214 -114819369 - MIR3 SINE MIR -14 194 123 261 322 51 28 chr2 138437469 138437616 -114818967 + MIR SINE MIR 31 189 -61 1150 297 101 63 chr2 138437632 138438758 -114817825 - L2 LINE L2 -19 3253 2090 14488 176 29 23 chr2 138439219 138440002 -114816581 + L1P3 LINE L1 466 1243 -5218 272 70 23 0 chr2 138440002 138440045 -114816538 + (CAA)n Simple_repeat Simple_repeat 2 45 0 14488 176 29 23 chr2 138440045 138442614 -114813969 + L1P3 LINE L1 1243 3860 -2601 495 206 15 69 chr2 138442745 138442827 -114813756 + MIR3 SINE MIR 41 115 -93 2117 84 40 0 chr2 138442827 138443123 -114813460 - AluY SINE Alu -3 308 1 495 206 15 69 chr2 138443123 138443171 -114813412 + MIR3 SINE MIR 115 164 -44 2006 239 69 88 chr2 138443570 138444495 -114812088 + L1ME3A LINE L1 5263 6170 0 1893 193 11 17 chr2 138444554 138444912 -114811671 + MLT1B LTR MaLR 32 387 -3 520 266 124 17 chr2 138445211 138445388 -114811195 - MIR3 SINE MIR -10 198 3 199 295 33 0 chr2 138445636 138445697 -114810886 + MIR SINE MIR 74 136 -126 503 156 122 0 chr2 138445739 138445829 -114810754 + MER4E LTR ERV1 1 101 -665 2067 104 7 3 chr2 138445829 138446118 -114810465 - AluSc SINE Alu -19 290 1 185 361 31 21 chr2 138447493 138447590 -114808993 + MIR3 SINE MIR 86 183 -25 809 280 32 9 chr2 138448017 138448235 -114808348 + MIR SINE MIR 28 250 -12 1800 133 16 16 chr2 138448267 138448575 -114808008 - AluSq SINE Alu -5 308 1 242 103 0 51 chr2 138449635 138449674 -114806909 + MIR SINE MIR 217 253 -9 683 244 6 22 chr2 138449980 138450160 -114806423 + MER5B DNA MER1_type 2 178 0 189 0 0 0 chr2 138450824 138450845 -114805738 + (T)n Simple_repeat Simple_repeat 1 21 0 187 231 26 0 chr2 138451968 138452007 -114804576 + MIR3 SINE MIR 156 195 -13 284 183 259 92 chr2 138452815 138452876 -114803707 + MLT1L LTR MaLR 3 52 -563 1950 159 87 58 chr2 138452876 138452963 -114803620 + MSTC LTR MaLR 1 84 -344 1996 98 44 0 chr2 138452963 138453237 -114803346 + AluSg SINE Alu 4 289 -21 1950 159 87 58 chr2 138453237 138453565 -114803018 + MSTC LTR MaLR 84 428 0 284 183 259 92 chr2 138453565 138453634 -114802949 + MLT1L LTR MaLR 52 155 -460 382 224 0 26 chr2 138453634 138453710 -114802873 - MER5B DNA MER1_type -1 177 104 1334 132 64 23 chr2 138453721 138453940 -114802643 + THE1B LTR MaLR 111 338 -26 238 237 224 0 chr2 138453954 138454030 -114802553 - MER5B DNA MER1_type -81 97 5 498 312 66 55 chr2 138454030 138454331 -114802252 + MLT1L LTR MaLR 144 451 -164 2099 128 0 0 chr2 138454331 138454619 -114801964 + AluSx SINE Alu 1 288 -24 498 312 66 55 chr2 138454619 138454679 -114801904 + MLT1L LTR MaLR 451 509 -106 297 259 214 0 chr2 138454928 138455040 -114801543 + MIR SINE MIR 115 250 -12 1223 254 104 39 chr2 138455778 138456332 -114800251 + L2 LINE L2 2712 3312 -1 818 191 43 61 chr2 138456372 138456603 -114799980 + L1MC/D LINE L1 5526 5752 -2290 1701 169 97 57 chr2 138456727 138457081 -114799502 - MLT2A2 LTR ERVL 0 554 216 2782 19 3 3 chr2 138457081 138457399 -114799184 - AluYb8 SINE Alu 0 318 1 1701 169 97 57 chr2 138457399 138457516 -114799067 - MLT2A2 LTR ERVL -338 216 55 306 0 0 0 chr2 138457516 138457550 -114799033 + (CA)n Simple_repeat Simple_repeat 2 35 0 1701 169 97 57 chr2 138457550 138457608 -114798975 - MLT2A2 LTR ERVL -499 55 1 291 210 150 10 chr2 138457870 138457970 -114798613 - MIR3 SINE MIR -50 158 45 1602 237 101 30 chr2 138459524 138460031 -114796552 + MLT1G LTR MaLR 33 575 -15 2217 108 0 13 chr2 138460538 138460844 -114795739 + AluSx SINE Alu 1 302 -10 783 238 68 104 chr2 138461236 138461399 -114795184 - MLT1J1 LTR MaLR -1 445 278 2337 123 0 0 chr2 138461399 138461709 -114794874 + AluSx SINE Alu 1 310 -2 783 238 68 104 chr2 138461709 138461957 -114794626 - MLT1J1 LTR MaLR -168 278 49 1512 287 154 14 chr2 138463320 138464162 -114792421 - L1M4 LINE L1 -1053 5093 4134 555 322 45 86 chr2 138464266 138464580 -114792003 + L2 LINE L2 2957 3257 -15 297 378 54 0 chr2 138464707 138464818 -114791765 + L2 LINE L2 3177 3293 -20 1896 113 0 102 chr2 138465100 138465444 -114791139 - AluSc SINE Alu 0 309 1 1931 124 33 4 chr2 138465472 138465746 -114790837 - AluSg SINE Alu -28 282 1 731 255 68 0 chr2 138466681 138466842 -114789741 - MER96 DNA MER1_type -2 173 2 349 195 129 97 chr2 138467103 138467239 -114789344 - MIR SINE MIR -63 145 33 243 326 112 51 chr2 138467993 138468404 -114788179 - L1MC/D LINE L1 -1966 5842 5407 382 266 9 9 chr2 138468616 138468725 -114787858 + MER112 DNA MER1_type 152 260 0 2008 147 3 16 chr2 138470518 138470832 -114785751 - AluSg SINE Alu 0 310 1 365 306 150 0 chr2 138471290 138471450 -114785133 - MIR SINE MIR -72 190 7 214 146 42 0 chr2 138471775 138471823 -114784760 + A-rich Low_complexity Low_complexity 1 50 0 6157 244 40 43 chr2 138471910 138474156 -114782427 + L1MC4a LINE L1 2500 4751 -1491 1921 121 50 3 chr2 138474156 138474438 -114782145 - AluJb SINE Alu -17 295 1 6157 244 40 43 chr2 138474438 138474846 -114781737 + L1MC4a LINE L1 4751 5159 -1083 1934 160 3 0 chr2 138474846 138475140 -114781443 - AluSx SINE Alu -17 295 1 6157 244 40 43 chr2 138475140 138475384 -114781199 + L1MC4a LINE L1 5159 5334 -908 1929 192 34 6 chr2 138475384 138475738 -114780845 - MLT1A1 LTR MaLR -1 364 1 6157 244 40 43 chr2 138475738 138476010 -114780573 + L1MC4a LINE L1 5334 5605 -637 682 186 86 0 chr2 138476044 138476184 -114780399 + L1MD1 LINE L1 6083 6234 -8 282 250 107 0 chr2 138476318 138476430 -114780153 + L1MC4a LINE L1 5771 5894 -1914 222 118 0 0 chr2 138477464 138477498 -114779085 + (TCCC)n Simple_repeat Simple_repeat 4 37 0 21 0 0 0 chr2 138478551 138478572 -114778011 + AT_rich Low_complexity Low_complexity 1 21 0 411 272 181 11 chr2 138480166 138480379 -114776204 - MIR SINE MIR -12 250 10 198 265 24 48 chr2 138481056 138481139 -114775444 - L2 LINE L2 -4 3309 3229 185 243 243 38 chr2 138481164 138481349 -114775234 + MIR SINE MIR 29 251 -11 1016 190 45 0 chr2 138481374 138481553 -114775030 + MER5A DNA MER1_type 3 189 0 21 0 0 0 chr2 138481764 138481785 -114774798 + AT_rich Low_complexity Low_complexity 1 21 0 299 250 134 81 chr2 138481946 138482118 -114774465 - Charlie8 DNA MER1_type -2152 265 85 252 0 0 0 chr2 138482213 138482241 -114774342 + (T)n Simple_repeat Simple_repeat 1 28 0 562 354 38 0 chr2 138482653 138482890 -114773693 - MIR SINE MIR 0 262 17 773 286 28 20 chr2 138484499 138484747 -114771836 - MIR SINE MIR -3 259 10 277 357 0 0 chr2 138488338 138488422 -114768161 - L2 LINE L2 -1 3271 3188 2230 118 3 0 chr2 138488802 138489107 -114767476 - AluSx SINE Alu 0 312 7 252 371 105 25 chr2 138492205 138492528 -114764055 + L2 LINE L2 2919 3267 -5 396 0 0 0 chr2 138493642 138493686 -114762897 + (CA)n Simple_repeat Simple_repeat 2 45 0 1535 193 0 0 chr2 138494671 138494935 -114761648 + AluJb SINE Alu 39 302 -10 552 304 0 34 chr2 138495499 138495703 -114760880 - MER117 DNA MER1_type 0 197 1 293 176 0 0 chr2 138495898 138495949 -114760634 + L2 LINE L2 2447 2497 -817 1357 294 64 18 chr2 138495966 138495986 -114760597 + LTR33A LTR ERVL 1 19 -504 3493 178 38 2 chr2 138495986 138496570 -114760013 + MER6A DNA MER2_type 1 605 0 1357 294 64 18 chr2 138496570 138497049 -114759534 + LTR33A LTR ERVL 19 523 0 975 301 84 34 chr2 138497106 138497502 -114759081 + L2 LINE L2 2589 2964 -349 3022 93 107 0 chr2 138497502 138497941 -114758642 + LTR19A LTR ERV1 1 486 0 975 301 84 34 chr2 138497941 138498038 -114758545 + L2 LINE L2 2964 3055 -258 1678 129 4 42 chr2 138498038 138498351 -114758232 - AluSx SINE Alu 0 334 32 975 301 84 34 chr2 138498351 138498548 -114758035 + L2 LINE L2 3055 3313 0 1054 183 105 132 chr2 138499118 138499528 -114757055 + MLT1C LTR MaLR 3 401 -66 2397 99 0 0 chr2 138499549 138499853 -114756730 - AluSg SINE Alu -6 304 1 315 0 0 0 chr2 138500033 138500068 -114756515 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2032 127 16 16 chr2 138500823 138501137 -114755446 - MLT1A1 LTR MaLR -41 324 11 1892 157 0 22 chr2 138502805 138503118 -114753465 - AluJb SINE Alu -6 306 1 247 286 26 0 chr2 138504327 138504404 -114752179 + MIR SINE MIR 76 154 -108 787 176 11 85 chr2 138504424 138504485 -114752098 + MER5A DNA MER1_type 15 79 -110 2080 120 0 7 chr2 138504485 138504769 -114751814 + AluSc SINE Alu 1 282 -27 924 108 0 0 chr2 138504769 138504796 -114751787 + AluY SINE Alu 1 311 0 787 176 11 85 chr2 138504796 138504921 -114751662 + MER5A DNA MER1_type 79 188 -1 198 150 75 0 chr2 138505003 138505043 -114751540 - MIR SINE MIR -108 154 112 7430 43 11 0 chr2 138505265 138506548 -114750035 - L1PA5 LINE L1 -5 6149 4863 234 210 73 121 chr2 138506821 138506945 -114749638 - MER5B DNA MER1_type 0 178 61 483 201 29 14 chr2 138506991 138507130 -114749453 - MER53 DNA DNA -46 143 3 234 0 0 0 chr2 138507456 138507482 -114749101 + (CTG)n Simple_repeat Simple_repeat 2 27 0 1693 197 0 13 chr2 138508829 138509128 -114747455 + AluJo SINE Alu 1 295 -17 468 274 103 0 chr2 138509320 138509466 -114747117 + MARNA DNA Mariner 213 373 -213 207 0 0 0 chr2 138509622 138509645 -114746938 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 3736 273 169 7 chr2 138509944 138511478 -114745105 + L2 LINE L2 225 2008 -1306 524 283 59 7 chr2 138511683 138511835 -114744748 - MIR3 SINE MIR -16 192 33 290 215 25 16 chr2 138511926 138512047 -114744536 + (CATA)n Simple_repeat Simple_repeat 2 123 0 3967 145 32 0 chr2 138512882 138513503 -114743080 + L1M1 LINE L1 16 656 -6909 472 235 34 8 chr2 138513513 138513632 -114742951 - L2 LINE L2 -1 3312 3191 6065 136 11 10 chr2 138513698 138514625 -114741958 + L1M1 LINE L1 665 1592 -5973 413 325 48 18 chr2 138514625 138514853 -114741730 - L1M4 LINE L1 -760 5386 5152 344 338 13 19 chr2 138514925 138515079 -114741504 - L1M4 LINE L1 -1785 4361 4209 740 281 60 95 chr2 138515180 138516311 -114740272 + L1M4 LINE L1 3029 4120 -2026 414 233 69 17 chr2 138516940 138517056 -114739527 - L2 LINE L2 -1 3312 3191 185 255 20 0 chr2 138517363 138517414 -114739169 - MIR SINE MIR -111 151 100 234 128 0 0 chr2 138517726 138517765 -114738818 + (TCCC)n Simple_repeat Simple_repeat 4 42 0 2397 88 0 3 chr2 138518301 138518608 -114737975 + AluY SINE Alu 1 306 -5 716 210 164 50 chr2 138518862 138519143 -114737440 + L1MC4a LINE L1 5749 6061 -1747 238 317 0 89 chr2 138520395 138520467 -114736116 - MIR SINE MIR -65 143 85 2354 81 17 0 chr2 138520467 138520762 -114735821 + AluSx SINE Alu 1 300 -12 238 317 0 89 chr2 138520762 138520812 -114735771 - MIR SINE MIR -123 85 32 782 201 43 27 chr2 138521877 138522061 -114734522 - MER20 DNA MER1_type -3 216 30 180 217 141 54 chr2 138524046 138524138 -114732445 + L2 LINE L2 3153 3252 -20 213 39 0 0 chr2 138524418 138524444 -114732139 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 219 337 6 80 chr2 138524915 138525078 -114731505 - L2 LINE L2 -224 3048 2898 28 86 0 0 chr2 138525184 138525254 -114731329 + AT_rich Low_complexity Low_complexity 1 70 0 23 0 0 0 chr2 138527210 138527233 -114729350 + AT_rich Low_complexity Low_complexity 1 23 0 293 347 42 6 chr2 138530328 138530495 -114726088 - MER5B DNA MER1_type 0 178 6 210 360 12 0 chr2 138530490 138530576 -114726007 - MIR3 SINE MIR -41 167 81 * 2221 124 0 7 chr2 138532640 138532947 -114723636 + AluSx SINE Alu 1 305 -7 228 167 0 0 chr2 138533602 138533650 -114722933 + CT-rich Low_complexity Low_complexity 4 51 0 213 222 206 0 chr2 138534159 138534222 -114722361 - MIR SINE MIR -111 151 76 1515 183 87 0 chr2 138534314 138534625 -114721958 - L1MB7 LINE L1 0 6184 5847 194 88 0 29 chr2 138534737 138534771 -114721812 + (GAATG)n Simple_repeat Simple_repeat 1 33 0 205 254 56 14 chr2 138535116 138535187 -114721396 - MIR3 SINE MIR -26 182 109 192 167 0 0 chr2 138536819 138536867 -114719716 + CT-rich Low_complexity Low_complexity 2 49 0 180 0 0 0 chr2 138537240 138537260 -114719323 + (CA)n Simple_repeat Simple_repeat 2 21 0 527 300 108 29 chr2 138537868 138538108 -114718475 - MLT1L LTR MaLR 0 615 357 2571 57 0 0 chr2 138540400 138540699 -114715884 + AluY SINE Alu 1 299 -12 1991 91 61 0 chr2 138541182 138541445 -114715138 + AluY SINE Alu 1 279 -32 252 0 0 0 chr2 138541445 138541473 -114715110 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 1071 169 0 0 chr2 138541797 138541963 -114714620 - AluSc SINE Alu -13 296 131 3935 201 48 12 chr2 138541984 138542880 -114713703 - L1MC4a LINE L1 -1 7807 6880 232 308 125 10 chr2 138542930 138543034 -114713549 - MIR SINE MIR -127 135 20 1493 202 7 20 chr2 138544252 138544544 -114712039 - AluJo SINE Alu -24 288 1 620 247 30 39 chr2 138547810 138548041 -114708542 - MIR SINE MIR 0 262 34 258 31 0 0 chr2 138548168 138548200 -114708383 - AluY SINE Alu -12 296 265 1242 76 13 0 chr2 138548200 138548357 -114708226 - AluY SINE Alu -152 159 1 21 36 0 0 chr2 138548980 138549008 -114707575 + AT_rich Low_complexity Low_complexity 1 28 0 303 289 75 15 chr2 138550640 138550841 -114705742 + L1M4 LINE L1 5097 5309 -837 426 215 21 0 chr2 138551002 138551095 -114705488 - L1MA10 LINE L1 -1 6333 6239 2056 117 7 20 chr2 138552344 138552644 -114703939 + AluSx SINE Alu 1 296 -16 2306 121 0 0 chr2 138552645 138552952 -114703631 + AluSg SINE Alu 2 308 -2 477 276 286 3 chr2 138554015 138554399 -114702184 + L2 LINE L2 1989 2481 -833 1493 194 3 38 chr2 138554424 138554743 -114701840 - AluJo SINE Alu -4 308 1 2364 62 3 56 chr2 138554757 138555078 -114701505 - AluY SINE Alu -7 304 1 246 74 0 74 chr2 138555135 138555189 -114701394 - MER3 DNA MER1_type -23 186 137 384 244 252 0 chr2 138555239 138555358 -114701225 - MER3 DNA MER1_type -60 149 1 822 268 167 26 chr2 138555372 138556025 -114700558 + L2 LINE L2 2570 3313 0 283 387 44 7 chr2 138558373 138558510 -114698073 - L2 LINE L2 -3 3269 3128 185 278 241 0 chr2 138558591 138558645 -114697938 - L2 LINE L2 -5 3267 3201 601 227 117 18 chr2 138559044 138559207 -114697376 + MER5A DNA MER1_type 11 189 0 329 235 10 29 chr2 138560913 138561015 -114695568 + MER103 DNA DNA 48 147 -19 597 178 167 0 chr2 138561112 138561270 -114695313 - MER5A DNA MER1_type 0 189 4 2154 73 26 0 chr2 138563266 138563539 -114693044 + L1PA5 LINE L1 5875 6154 0 711 230 111 9 chr2 138565709 138565926 -114690657 - MIR SINE MIR -22 240 2 2490 151 62 5 chr2 138566295 138566698 -114689885 + MSTB LTR MaLR 1 426 0 2196 97 6 26 chr2 138567590 138567901 -114688682 + AluSc SINE Alu 1 305 -4 255 314 86 0 chr2 138568737 138568842 -114687741 + MIR SINE MIR 112 225 -37 244 279 73 0 chr2 138569025 138569093 -114687490 + L2 LINE L2 3199 3271 -1 2058 165 110 11 chr2 138569717 138570099 -114686484 - MSTB LTR MaLR -4 422 3 195 336 107 33 chr2 138570259 138570381 -114686202 - L3b LINE CR1 -328 1255 1125 211 205 0 0 chr2 138574145 138574184 -114682399 + (CA)n Simple_repeat Simple_repeat 2 40 0 490 285 83 31 chr2 138574192 138574420 -114682163 + L1ME1 LINE L1 129 368 -6028 8509 240 78 24 chr2 138574461 138577692 -114678891 + L1ME1 LINE L1 1890 5280 -935 2192 233 12 14 chr2 138577732 138578231 -114678352 + L1ME1 LINE L1 5733 6230 -5 276 286 41 31 chr2 138578490 138578588 -114677995 - MIR SINE MIR -68 194 96 361 266 237 6 chr2 138578807 138578980 -114677603 - MIR SINE MIR -4 258 46 256 167 167 0 chr2 138579440 138579506 -114677077 - MLT1L LTR MaLR -414 201 125 245 274 85 16 chr2 138579583 138579716 -114676867 - MIR SINE MIR -112 150 4 1966 115 57 4 chr2 138579881 138580160 -114676423 - AluSx SINE Alu -18 294 1 1776 136 0 49 chr2 138580268 138580576 -114676007 - AluJb SINE Alu 0 312 20 1802 130 78 75 chr2 138582174 138582573 -114674010 + MSTB1 LTR MaLR 33 432 0 1385 221 119 48 chr2 138583769 138584249 -114672334 - MLT2B1 LTR ERVL -6 514 1 241 240 83 73 chr2 138584518 138584614 -114671969 - MIR3 SINE MIR -28 180 84 401 256 70 8 chr2 138584999 138585128 -114671455 + LTR16C LTR ERVL 186 322 -169 355 215 151 0 chr2 138585173 138585266 -114671317 + MER45A DNA AcHobo 72 178 0 466 276 90 0 chr2 138585266 138585411 -114671172 + LTR16C LTR ERVL 329 486 -5 275 333 0 11 chr2 138586043 138586130 -114670453 + L2 LINE L2 3227 3312 -1 2312 89 0 7 chr2 138586640 138586933 -114669650 + AluSg SINE Alu 1 291 -19 324 48 0 0 chr2 138586946 138586988 -114669595 + (TAA)n Simple_repeat Simple_repeat 2 43 0 397 311 20 7 chr2 138587000 138587151 -114669432 - MIR SINE MIR -18 244 92 306 256 22 11 chr2 138588976 138589066 -114667517 + MER72 LTR ERV1 371 461 -261 330 195 69 19 chr2 138589189 138589318 -114667265 + LTR26E LTR ERV1 397 557 -3 627 313 48 19 chr2 138590137 138590447 -114666136 - L1ME3A LINE L1 -203 5967 5649 346 252 33 60 chr2 138590450 138590601 -114665982 + MER112 DNA MER1_type 4 150 -110 429 223 139 30 chr2 138590696 138590898 -114665685 - L1MDa LINE L1 -3776 2353 2130 278 271 103 82 chr2 138591267 138591596 -114664987 - L1MDa LINE L1 -4442 1687 1352 484 256 72 38 chr2 138591602 138591864 -114664719 - L1MDa LINE L1 -5300 819 549 249 303 66 0 chr2 138592009 138592131 -114664452 - L1MDa LINE L1 -5545 574 445 412 213 25 0 chr2 138592413 138592493 -114664090 + MER81 DNA DNA 33 114 0 314 289 48 64 chr2 138592552 138592739 -114663844 - L1MDa LINE L1 -5934 185 2 425 233 125 23 chr2 138592753 138592929 -114663654 + Charlie8 DNA MER1_type 72 265 -2152 354 323 32 0 chr2 138593209 138593333 -114663250 + MIR SINE MIR 120 247 -15 217 314 88 69 chr2 138594362 138594521 -114662062 + L2 LINE L2 2811 2972 -300 771 250 0 0 chr2 138594555 138594715 -114661868 - MER5B DNA MER1_type -18 160 1 343 297 61 34 chr2 138594891 138595039 -114661544 + L2 LINE L2 3121 3272 0 1874 116 68 14 chr2 138596502 138596794 -114659789 - AluSc SINE Alu -1 308 1 927 260 104 75 chr2 138596897 138597200 -114659383 + MLT1J LTR MaLR 4 328 -183 2316 114 0 0 chr2 138597200 138597506 -114659077 + AluSc SINE Alu 1 306 -3 927 260 104 75 chr2 138597506 138597694 -114658889 + MLT1J LTR MaLR 328 509 -2 2356 93 10 0 chr2 138598434 138598744 -114657839 - AluSp SINE Alu 0 313 1 2652 47 0 0 chr2 138599838 138600139 -114656444 - AluY SINE Alu -10 301 1 1974 159 0 10 chr2 138600140 138600448 -114656135 - AluJo SINE Alu -7 305 1 261 236 0 0 chr2 138600918 138600973 -114655610 + MLT1J LTR MaLR 110 164 -347 254 49 98 29 chr2 138601558 138601660 -114654923 + (TA)n Simple_repeat Simple_repeat 2 110 0 7312 127 48 24 chr2 138601959 138602879 -114653704 + Tigger3b DNA MER2_type 1 958 -2070 2268 77 0 61 chr2 138602879 138603191 -114653392 - AluY SINE Alu -18 293 1 7312 127 48 24 chr2 138603191 138603472 -114653111 + Tigger3b DNA MER2_type 958 1231 0 557 246 8 8 chr2 138603484 138603610 -114652973 + MER3 DNA MER1_type 84 209 0 228 290 0 16 chr2 138603566 138603628 -114652955 - MER3 DNA MER1_type -119 90 30 * 218 278 0 0 chr2 138605197 138605251 -114651332 + (TATG)n Simple_repeat Simple_repeat 3 56 0 339 318 66 26 chr2 138605745 138605896 -114650687 - MIR3 SINE MIR -22 186 30 394 281 182 31 chr2 138605949 138606141 -114650442 - MIR SINE MIR -19 243 23 265 278 139 28 chr2 138607208 138607316 -114649267 - MIR SINE MIR -64 144 25 27 29 0 0 chr2 138609369 138609403 -114647180 + AT_rich Low_complexity Low_complexity 1 34 0 2462 70 3 0 chr2 138611348 138611650 -114644933 - AluY SINE Alu -8 303 1 21 0 0 0 chr2 138611650 138611671 -114644912 + AT_rich Low_complexity Low_complexity 1 21 0 220 280 104 48 chr2 138617056 138617181 -114639402 - L2 LINE L2 0 3313 3182 203 176 0 0 chr2 138617627 138617661 -114638922 + (CATA)n Simple_repeat Simple_repeat 3 36 0 201 261 22 0 chr2 138617871 138617917 -114638666 - L2 LINE L2 -16 3256 3210 323 263 25 0 chr2 138618043 138618123 -114638460 - MIR SINE MIR -176 86 5 2135 134 0 0 chr2 138618266 138618564 -114638019 + AluSg SINE Alu 1 298 -12 707 287 61 9 chr2 138620244 138620474 -114636109 + MIR SINE MIR 2 243 -19 25 31 0 0 chr2 138620581 138620613 -114635970 + AT_rich Low_complexity Low_complexity 1 32 0 1991 157 83 0 chr2 138622114 138622452 -114634131 - MER47A DNA MER2_type 0 366 1 599 248 159 28 chr2 138622456 138622670 -114633913 + MIR SINE MIR 4 245 -17 195 310 63 51 chr2 138622835 138622993 -114633590 + MIR3 SINE MIR 28 187 -21 282 56 0 0 chr2 138623854 138623890 -114632693 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 476 89 0 0 chr2 138623892 138623948 -114632635 - AluSp/q SINE Alu -31 282 227 237 65 0 0 chr2 138624811 138624842 -114631741 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1992 109 18 28 chr2 138624844 138625129 -114631454 - AluSp SINE Alu -31 282 1 530 224 164 26 chr2 138625245 138625397 -114631186 - MER5A DNA MER1_type -6 183 11 631 253 47 18 chr2 138625803 138625973 -114630610 + MIR SINE MIR 14 188 -74 393 22 0 0 chr2 138626040 138626086 -114630497 + (TA)n Simple_repeat Simple_repeat 1 46 0 516 116 0 0 chr2 138626086 138626172 -114630411 + (GA)n Simple_repeat Simple_repeat 1 86 0 2135 118 0 10 chr2 138626172 138626469 -114630114 + AluSx SINE Alu 1 294 -18 348 24 0 0 chr2 138626470 138626511 -114630072 + (CA)n Simple_repeat Simple_repeat 2 42 0 543 217 14 29 chr2 138626840 138626978 -114629605 - MIR SINE MIR -37 225 90 2250 123 0 0 chr2 138627360 138627669 -114628914 + AluSg SINE Alu 1 309 -1 202 250 36 0 chr2 138629719 138629775 -114626808 - L2 LINE L2 -6 3266 3209 262 366 30 15 chr2 138630541 138630672 -114625911 + MIR3 SINE MIR 15 147 -61 3446 140 21 11 chr2 138630676 138631241 -114625342 + L1PA16 LINE L1 5594 6164 -2 30 27 0 0 chr2 138631551 138631588 -114624995 + AT_rich Low_complexity Low_complexity 1 37 0 715 161 0 8 chr2 138631593 138631717 -114624866 - L1MA3 LINE L1 0 6305 6183 1087 269 46 57 chr2 138632717 138633171 -114623412 + MLT1J2 LTR MaLR 2 450 0 237 307 0 13 chr2 138633220 138633295 -114623288 + (TATATG)n Simple_repeat Simple_repeat 5 78 0 896 130 0 0 chr2 138633773 138633896 -114622687 - AluSq/x SINE Alu -190 123 1 279 0 0 0 chr2 138635879 138635910 -114620673 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 286 336 44 62 chr2 138636505 138636731 -114619852 - MIR SINE MIR -38 224 3 560 260 156 28 chr2 138636940 138637170 -114619413 - MIR SINE MIR 0 262 10 211 203 68 27 chr2 138637483 138637557 -114619026 - MIR SINE MIR 0 262 186 186 43 0 0 chr2 138637563 138637586 -114618997 + (TTTAA)n Simple_repeat Simple_repeat 5 27 0 6049 170 11 1 chr2 138637597 138639594 -114616989 - L1PB1 LINE L1 0 6867 4850 1063 233 98 34 chr2 138639716 138640073 -114616510 + L1MC4 LINE L1 7631 8016 -26 3076 136 30 43 chr2 138640073 138640197 -114616386 - L1MA4A LINE L1 -2 6301 6177 2027 148 7 0 chr2 138640197 138640501 -114616082 - AluSx SINE Alu -6 306 1 3076 136 30 43 chr2 138640501 138640934 -114615649 - L1MA4A LINE L1 -126 6177 5751 1063 233 98 34 chr2 138640934 138640962 -114615621 + L1MC4 LINE L1 8016 8041 -1 13576 158 68 11 chr2 138642068 138644639 -114611944 + L1PBa LINE L1 458 3195 -3667 608 299 64 38 chr2 138644752 138645105 -114611478 - MLT1J LTR MaLR -26 589 215 9909 183 53 12 chr2 138645286 138649807 -114606776 - L1PB1 LINE L1 -2005 4857 6 509 198 0 10 chr2 138649833 138649929 -114606654 - MIR SINE MIR -70 192 98 247 326 157 41 chr2 138650011 138650219 -114606364 - L2 LINE L2 -49 3223 3041 2242 162 11 11 chr2 138650219 138650584 -114605999 - MLT1A1 LTR MaLR 0 365 1 247 326 157 41 chr2 138650584 138650718 -114605865 - L2 LINE L2 -231 3041 2841 192 306 35 47 chr2 138650733 138650818 -114605765 - MIR SINE MIR -158 104 21 21 82 0 0 chr2 138652055 138652104 -114604479 + AT_rich Low_complexity Low_complexity 1 49 0 277 208 267 30 chr2 138653528 138653629 -114602954 + MIR SINE MIR 47 171 -91 1718 162 6 50 chr2 138655458 138655779 -114600804 - AluJb SINE Alu -5 307 1 1830 218 57 23 chr2 138655890 138655911 -114600672 + Charlie4a DNA MER1_type 13 32 -1929 1855 122 0 42 chr2 138655911 138656197 -114600386 + AluSx SINE Alu 1 274 -38 1830 218 57 23 chr2 138656197 138656653 -114599930 + Charlie4a DNA MER1_type 32 506 -2 188 33 0 33 chr2 138657732 138657762 -114598821 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2253 79 4 0 chr2 138657765 138658045 -114598538 - AluY SINE Alu -30 281 1 180 97 0 0 chr2 138658049 138658080 -114598503 + (T)n Simple_repeat Simple_repeat 1 31 0 2117 174 36 11 chr2 138658534 138658972 -114597611 + L1PBa LINE L1 6 454 -6409 841 87 0 0 chr2 138659072 138659175 -114597408 - AluSg SINE Alu -206 104 2 240 143 0 0 chr2 138659505 138659547 -114597036 + (A)n Simple_repeat Simple_repeat 1 42 0 280 288 128 16 chr2 138660865 138660990 -114595593 + MIR3 SINE MIR 8 146 -62 192 293 17 0 chr2 138661886 138661944 -114594639 + MIR SINE MIR 153 211 -51 191 36 36 0 chr2 138662283 138662311 -114594272 + (CAAA)n Simple_repeat Simple_repeat 1 29 0 1049 239 83 71 chr2 138663445 138663926 -114592657 + MLT1J LTR MaLR 19 505 -6 21 36 0 0 chr2 138664117 138664145 -114592438 + AT_rich Low_complexity Low_complexity 1 28 0 351 284 43 35 chr2 138664476 138664617 -114591966 - MIR SINE MIR -30 232 91 743 213 165 48 chr2 138665584 138665917 -114590666 + MLT1J LTR MaLR 12 383 -128 631 216 85 7 chr2 138666022 138666175 -114590408 + MLT1L LTR MaLR 65 229 -386 231 36 0 0 chr2 138667370 138667398 -114589185 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 185 292 92 69 chr2 138668960 138669090 -114587493 + MIR SINE MIR 119 251 -11 2237 75 0 34 chr2 138669152 138669468 -114587115 - AluY SINE Alu 0 306 1 189 147 0 0 chr2 138669518 138669552 -114587031 + (TG)n Simple_repeat Simple_repeat 2 35 0 271 318 71 0 chr2 138669941 138670067 -114586516 - L2 LINE L2 0 3313 3179 2332 102 0 3 chr2 138670159 138670463 -114586120 - AluSg SINE Alu -7 303 1 337 328 61 11 chr2 138670763 138670943 -114585640 - MER5A DNA MER1_type 0 189 1 279 0 0 0 chr2 138670951 138670982 -114585601 + (TTTTA)n Simple_repeat Simple_repeat 4 34 0 585 262 12 12 chr2 138671162 138671334 -114585249 + MER5B DNA MER1_type 6 177 -1 208 357 0 9 chr2 138671909 138672021 -114584562 + (TG)n Simple_repeat Simple_repeat 2 112 0 1621 192 0 42 chr2 138672142 138672450 -114584133 - AluJo SINE Alu -14 298 4 916 188 21 5 chr2 138673485 138673671 -114582912 - MER5A DNA MER1_type 0 189 1 572 62 12 0 chr2 138674669 138674750 -114581833 + (CA)n Simple_repeat Simple_repeat 2 83 0 2285 110 0 0 chr2 138675143 138675434 -114581149 - AluSq SINE Alu -22 291 1 330 313 0 0 chr2 138675442 138675538 -114581045 + T-rich Low_complexity Low_complexity 1 96 0 1667 219 62 2 chr2 138675538 138675971 -114580612 - L1MC4 LINE L1 -486 7556 7098 1855 266 97 15 chr2 138676002 138676806 -114579777 - L1MC4a LINE L1 -890 6918 6049 1718 139 3 57 chr2 138676863 138677164 -114579419 + AluJo SINE Alu 1 285 -27 288 0 0 0 chr2 138677165 138677197 -114579386 + (CA)n Simple_repeat Simple_repeat 2 33 0 190 366 41 16 chr2 138678446 138678569 -114578014 + MIR3 SINE MIR 83 208 0 2876 200 57 47 chr2 138680131 138680749 -114575834 - L1MC4 LINE L1 -11 8031 7400 1150 149 57 22 chr2 138680749 138680977 -114575606 + MER46A DNA MER2_type 1 236 0 2876 200 57 47 chr2 138680977 138681248 -114575335 - L1MC4 LINE L1 -642 7400 7133 537 110 0 0 chr2 138681279 138681361 -114575222 + (TCCA)n Simple_repeat Simple_repeat 4 85 0 498 118 0 0 chr2 138681361 138681437 -114575146 + MADE1 DNA Mariner 5 80 0 1494 169 0 13 chr2 138681636 138681872 -114574711 - AluJo SINE Alu -43 269 37 1994 145 10 7 chr2 138682346 138682649 -114573934 - AluSx SINE Alu -8 304 1 969 230 193 45 chr2 138682816 138683299 -114573284 + MLT1H1 LTR MaLR 2 555 0 23 0 0 0 chr2 138683794 138683817 -114572766 + AT_rich Low_complexity Low_complexity 1 23 0 554 239 61 11 chr2 138685146 138685326 -114571257 - MER5A DNA MER1_type 0 189 1 255 195 85 61 chr2 138686633 138686715 -114569868 - MIR SINE MIR -64 198 115 207 209 0 0 chr2 138686946 138686989 -114569594 + A-rich Low_complexity Low_complexity 1 43 0 647 319 58 45 chr2 138687046 138687582 -114569001 + L1ME3A LINE L1 5421 5963 -207 309 239 70 78 chr2 138687614 138687756 -114568827 + L1ME3A LINE L1 5931 6071 -99 23 0 0 0 chr2 138687773 138687796 -114568787 + AT_rich Low_complexity Low_complexity 1 23 0 180 152 0 0 chr2 138687839 138687872 -114568711 + (CA)n Simple_repeat Simple_repeat 1 33 0 2381 50 3 53 chr2 138689008 138689327 -114567256 + AluY SINE Alu 1 303 -8 220 286 163 0 chr2 138689413 138689511 -114567072 - L2 LINE L2 -955 2359 2246 510 307 34 10 chr2 138689573 138689778 -114566805 - MIR SINE MIR 0 262 53 201 39 0 0 chr2 138689778 138689804 -114566779 + (A)n Simple_repeat Simple_repeat 1 26 0 2273 118 0 0 chr2 138689811 138690124 -114566459 + AluSq SINE Alu 1 313 0 269 350 123 6 chr2 138690797 138690960 -114565623 + MIR3 SINE MIR 1 182 -26 740 149 0 0 chr2 138691445 138691559 -114565024 - MER20 DNA MER1_type 0 219 106 13563 139 11 27 chr2 138691563 138693551 -114563032 - Tigger1 DNA MER2_type 0 2418 473 1909 154 3 7 chr2 138693551 138693876 -114562707 + AluSx SINE Alu 1 312 0 13563 139 11 27 chr2 138693876 138694320 -114562263 - Tigger1 DNA MER2_type -1945 473 24 346 233 14 0 chr2 138694329 138694402 -114562181 - MER20 DNA MER1_type -116 103 30 210 128 0 0 chr2 138694406 138694445 -114562138 + (CA)n Simple_repeat Simple_repeat 2 40 0 213 222 63 16 chr2 138694546 138694609 -114561974 - MIR3 SINE MIR -21 187 122 1680 100 4 25 chr2 138694715 138694954 -114561629 + AluSg/x SINE Alu 79 312 0 538 380 26 0 chr2 138696878 138697107 -114559476 + MIR SINE MIR 2 236 -26 741 163 25 103 chr2 138697136 138697339 -114559244 - MER3 DNA MER1_type -21 188 2 247 196 49 98 chr2 138697512 138697614 -114558969 - MIR SINE MIR -46 216 120 2316 91 7 0 chr2 138697965 138698326 -114558257 + AluY SINE Alu 1 363 0 684 329 106 42 chr2 138698413 138699867 -114556716 - L1MC/D LINE L1 -743 5403 4158 706 215 24 23 chr2 138700382 138700726 -114555857 - LTR52 LTR ERVL -4 417 1 2421 73 0 0 chr2 138701615 138701915 -114554668 - AluY SINE Alu -11 300 1 1151 339 116 56 chr2 138701987 138703023 -114553560 - L3 LINE CR1 -140 1437 312 2099 127 3 0 chr2 138703023 138703314 -114553269 + AluSx SINE Alu 1 292 -20 1151 339 116 56 chr2 138703314 138703532 -114553051 - L3 LINE CR1 -1265 312 108 369 253 91 40 chr2 138703846 138704044 -114552539 - MIR SINE MIR -21 241 34 248 263 35 0 chr2 138704522 138704579 -114552004 - L2 LINE L2 -19 3294 3236 210 226 48 0 chr2 138704836 138704898 -114551685 + GA-rich Low_complexity Low_complexity 5 69 0 803 212 15 10 chr2 138706878 138707076 -114549507 - MER3 DNA MER1_type -5 204 6 23 0 0 0 chr2 138707796 138707819 -114548764 + AT_rich Low_complexity Low_complexity 1 23 0 570 301 86 0 chr2 138709389 138709575 -114547008 - MIR SINE MIR -21 241 40 1806 94 0 0 chr2 138710370 138710593 -114545990 - AluY SINE Alu -88 223 1 353 318 45 30 chr2 138713124 138713322 -114543261 - Charlie8 DNA MER1_type -2200 217 17 508 351 37 60 chr2 138713442 138713741 -114542842 - L2 LINE L2 0 3272 2981 306 292 124 49 chr2 138716372 138716557 -114540026 - MIR3 SINE MIR 0 208 10 184 259 86 37 chr2 138716752 138716833 -114539750 + MIR SINE MIR 40 124 -138 947 186 6 0 chr2 138717642 138717798 -114538785 - FAM SINE Alu -18 157 1 629 231 60 28 chr2 138718541 138718757 -114537826 - L1ME1 LINE L1 -128 6038 5816 568 305 25 72 chr2 138718991 138719227 -114537356 + MIR SINE MIR 21 245 -17 21 57 0 0 chr2 138719496 138719531 -114537052 + AT_rich Low_complexity Low_complexity 1 35 0 308 238 85 82 chr2 138719641 138719760 -114536823 + MIR SINE MIR 29 153 -55 1828 148 50 0 chr2 138719871 138720148 -114536435 + AluSx SINE Alu 1 291 -21 551 289 53 50 chr2 138720359 138721077 -114535506 + L1MC/D LINE L1 4309 5050 -1096 241 204 78 42 chr2 138721348 138721490 -114535093 + L1MC/D LINE L1 5337 5483 -2325 269 275 141 30 chr2 138721586 138721918 -114534665 + L1MC/D LINE L1 5526 5898 -223 566 349 42 31 chr2 138722912 138723460 -114533123 + L1MC/D LINE L1 2277 2830 -3316 227 303 15 8 chr2 138723472 138723604 -114532979 + L1MC/D LINE L1 2857 2989 -3157 1583 159 64 27 chr2 138723641 138723936 -114532647 + AluJb SINE Alu 5 310 -2 270 329 74 32 chr2 138724462 138725220 -114531363 + L1MC/D LINE L1 3641 4430 -1716 350 301 68 18 chr2 138725298 138725461 -114531122 + L1MC/D LINE L1 4697 4867 -1279 2304 145 59 36 chr2 138725517 138725899 -114530684 + Tigger2 DNA MER2_type 9 487 -2231 2161 133 0 3 chr2 138725899 138726199 -114530384 + AluSx SINE Alu 1 299 -13 2304 145 59 36 chr2 138726199 138726453 -114530130 + Tigger2 DNA MER2_type 487 734 -1984 1003 123 123 34 chr2 138726527 138726695 -114529888 + Tigger2 DNA MER2_type 2461 2657 -61 1897 174 10 0 chr2 138726695 138726993 -114529590 - AluJb SINE Alu -7 305 5 1003 123 123 34 chr2 138726993 138727059 -114529524 + Tigger2 DNA MER2_type 2657 2716 -2 410 347 63 10 chr2 138727367 138727750 -114528833 + L1MC/D LINE L1 5256 5658 -2150 333 291 28 122 chr2 138727750 138727816 -114528767 + HAL1 LINE L1 95 166 -2341 2265 100 0 3 chr2 138727816 138728126 -114528457 - AluY SINE Alu -2 309 1 333 291 28 122 chr2 138728126 138728313 -114528270 + HAL1 LINE L1 166 324 -2183 895 274 145 60 chr2 138728377 138729708 -114526875 + HAL1 LINE L1 447 1961 -546 1169 149 42 9 chr2 138729708 138729923 -114526660 + L1PB1 LINE L1 5927 6148 -3 895 274 145 60 chr2 138729923 138730328 -114526255 + HAL1 LINE L1 1961 2330 -177 518 271 116 0 chr2 138730361 138730490 -114526093 + MIR SINE MIR 13 156 -106 23 68 0 0 chr2 138730687 138730731 -114525852 + AT_rich Low_complexity Low_complexity 1 44 0 7031 169 72 12 chr2 138731129 138731685 -114524898 + L1PB4 LINE L1 3624 4145 -2153 1363 191 78 25 chr2 138731685 138731831 -114524752 + AluJo SINE Alu 1 138 -174 2387 84 0 3 chr2 138731831 138732142 -114524441 + AluY SINE Alu 1 310 -1 1363 191 78 25 chr2 138732142 138732278 -114524305 + AluJo SINE Alu 138 298 -14 7031 169 72 12 chr2 138732278 138734093 -114522490 + L1PB4 LINE L1 4145 6278 -20 21 71 0 0 chr2 138734262 138734304 -114522279 + AT_rich Low_complexity Low_complexity 1 42 0 310 264 74 16 chr2 138734355 138734476 -114522107 + L1MC4a LINE L1 4688 4815 -1331 425 295 95 39 chr2 138734637 138735052 -114521531 + L1MC4a LINE L1 5045 5485 -765 367 331 52 30 chr2 138735079 138735444 -114521139 + L1MC4a LINE L1 5552 5924 -1884 922 151 16 36 chr2 138736648 138736840 -114519743 + MER5A DNA MER1_type 1 188 -1 718 171 97 65 chr2 138736849 138737066 -114519517 - MER58A DNA MER1_type 0 224 1 247 294 188 6 chr2 138737072 138737232 -114519351 - MIR SINE MIR -1 261 73 2657 94 89 5 chr2 138737822 138738217 -114518366 - MSTA LTR MaLR 0 428 1 741 174 14 7 chr2 138738218 138738356 -114518227 - MLT1A1 LTR MaLR 0 365 227 206 345 69 11 chr2 138738446 138738533 -114518050 - MIR SINE MIR -169 93 2 547 208 214 19 chr2 138738782 138738936 -114517647 + MIR SINE MIR 5 188 -74 841 106 8 0 chr2 138738941 138739073 -114517510 + L1MA5A LINE L1 6161 6293 -4 530 120 22 0 chr2 138739075 138739167 -114517416 + L1M LINE L1 5312 5405 -775 361 183 0 24 chr2 138739167 138739237 -114517346 + L1MB4 LINE L1 6101 6180 0 25 0 0 0 chr2 138739246 138739271 -114517312 + AT_rich Low_complexity Low_complexity 1 25 0 657 259 35 25 chr2 138741495 138741696 -114514887 - MLT1I LTR MaLR 0 409 207 21 0 0 0 chr2 138741904 138741925 -114514658 + AT_rich Low_complexity Low_complexity 1 21 0 3835 82 15 27 chr2 138741928 138742523 -114514060 - L1MA2 LINE L1 0 6304 5717 609 276 113 9 chr2 138745137 138745358 -114511225 + MIR SINE MIR 15 258 -4 319 244 0 0 chr2 138747702 138747788 -114508795 + L1ME LINE L1 5711 5796 -325 619 251 34 45 chr2 138748799 138748978 -114507605 - MIR SINE MIR -1 261 85 277 230 0 50 chr2 138751446 138751546 -114505037 + GA-rich Low_complexity Low_complexity 2 96 0 256 247 71 71 chr2 138752020 138752105 -114504478 + MIR SINE MIR 31 115 -147 180 0 0 0 chr2 138752470 138752490 -114504093 + (TA)n Simple_repeat Simple_repeat 1 20 0 361 289 0 0 chr2 138752503 138752593 -114503990 - L1MC4 LINE L1 -1339 6703 6614 * 379 275 0 0 chr2 138752523 138752614 -114503969 + L1MC4 LINE L1 6614 6704 -1338 281 329 0 36 chr2 138752871 138753008 -114503575 + CT-rich Low_complexity Low_complexity 5 136 0 184 171 0 29 chr2 138753697 138753732 -114502851 - L2 LINE L2 -12 3301 3268 235 283 9 62 chr2 138753798 138753911 -114502672 - L2 LINE L2 -181 3091 2985 701 274 129 72 chr2 138753919 138754376 -114502207 + MLT1K LTR MaLR 7 489 -99 218 367 101 22 chr2 138754457 138754596 -114501987 - L2 LINE L2 -338 2975 2826 514 371 8 22 chr2 138754630 138754897 -114501686 + L2 LINE L2 2685 2947 -367 432 277 114 18 chr2 138754898 138755064 -114501519 - MIR SINE MIR -61 201 20 332 289 35 9 chr2 138755241 138755355 -114501228 - L2 LINE L2 -1 3271 3155 29 0 0 0 chr2 138756026 138756055 -114500528 + AT_rich Low_complexity Low_complexity 1 29 0 2204 107 0 77 chr2 138757307 138757516 -114499067 - MER1B DNA MER1_type -2373 337 166 2393 83 0 26 chr2 138757516 138757829 -114498754 + AluY SINE Alu 1 305 -6 2204 107 0 77 chr2 138757829 138757984 -114498599 - MER1B DNA MER1_type -2544 166 1 231 257 54 40 chr2 138758033 138758107 -114498476 - MIR SINE MIR -101 107 33 3748 135 37 22 chr2 138758140 138758813 -114497770 - L1PB4 LINE L1 -9 6147 5465 4954 166 29 18 chr2 138759323 138761188 -114495395 - L1PB4 LINE L1 -74 6082 4197 873 267 76 4 chr2 138761448 138761673 -114494910 + MIR SINE MIR 1 241 -21 736 201 87 7 chr2 138762208 138762321 -114494262 + AluJo SINE Alu 8 137 -175 405 0 0 0 chr2 138762321 138762366 -114494217 + (CAAAA)n Simple_repeat Simple_repeat 1 45 0 736 201 87 7 chr2 138762366 138762401 -114494182 + AluJo SINE Alu 137 168 -144 740 211 39 29 chr2 138762441 138762645 -114493938 + MLT1A2 LTR MaLR 169 374 0 23 33 0 0 chr2 138762884 138762914 -114493669 + AT_rich Low_complexity Low_complexity 1 30 0 571 243 21 7 chr2 138763164 138763308 -114493275 + MLT2F LTR ERVL 1 146 -517 613 191 145 0 chr2 138763365 138763517 -114493066 + MLT2F LTR ERVL 490 663 0 2518 189 35 0 chr2 138763638 138764131 -114492452 + MLT2B2 LTR ERVL 1 510 -5 546 194 169 25 chr2 138764238 138764398 -114492185 - MIR SINE MIR -69 193 11 615 118 0 0 chr2 138764553 138764646 -114491937 + MER57B LTR ERV1 1 93 -341 955 159 70 0 chr2 138764680 138764881 -114491702 + MER57B LTR ERV1 220 434 0 180 283 359 0 chr2 138764881 138764973 -114491610 + MIR3 SINE MIR 82 206 -2 195 100 0 0 chr2 138765665 138765695 -114490888 + (TTTTC)n Simple_repeat Simple_repeat 3 32 0 2324 58 0 4 chr2 138766283 138766561 -114490022 - AluY SINE Alu -9 302 26 424 340 63 25 chr2 138766624 138766783 -114489800 + L2 LINE L2 3090 3254 -18 1937 139 4 0 chr2 138767664 138767945 -114488638 + AluSx SINE Alu 13 294 -18 2284 120 0 0 chr2 138769333 138769641 -114486942 - AluSx SINE Alu -2 310 3 267 307 77 29 chr2 138770327 138770660 -114485923 - LTR16C LTR ERVL -86 405 4 204 275 55 37 chr2 138771814 138771923 -114484660 + MIR SINE MIR 30 140 -68 237 288 12 12 chr2 138772083 138772163 -114484420 + GA-rich Low_complexity Low_complexity 1 80 0 25 65 0 0 chr2 138772895 138772941 -114483642 + AT_rich Low_complexity Low_complexity 1 46 0 2218 81 3 78 chr2 138772946 138773079 -114483504 - L1PB2 LINE L1 0 6151 6010 2038 141 11 0 chr2 138773079 138773362 -114483221 + AluSx SINE Alu 1 286 -26 2218 81 3 78 chr2 138773362 138773587 -114482996 - L1PB2 LINE L1 -141 6010 5820 274 188 125 52 chr2 138773899 138773995 -114482588 + L1ME4a LINE L1 5716 5818 -303 32 75 0 0 chr2 138774284 138774351 -114482232 + AT_rich Low_complexity Low_complexity 1 67 0 199 309 64 18 chr2 138774412 138774522 -114482061 - MIR SINE MIR -73 135 21 895 294 123 19 chr2 138774668 138775140 -114481443 + MLT1K LTR MaLR 66 586 -2 921 188 5 51 chr2 138775624 138775821 -114480762 - MER5A DNA MER1_type -1 188 1 214 322 67 0 chr2 138776851 138776941 -114479642 - MIR3 SINE MIR -23 185 90 639 353 76 42 chr2 138777010 138777707 -114478876 + L3 LINE CR1 684 1404 -173 639 258 42 19 chr2 138777731 138777944 -114478639 - MIR SINE MIR -5 257 40 267 188 21 0 chr2 138777975 138778023 -114478560 + L3 LINE CR1 1411 1459 -118 221 278 191 24 chr2 138779127 138779253 -114477330 - MIR SINE MIR -108 154 8 1929 157 0 3 chr2 138779977 138780271 -114476312 + AluJb SINE Alu 1 293 -19 417 20 0 0 chr2 138782360 138782410 -114474173 + (GAAAA)n Simple_repeat Simple_repeat 5 54 0 1091 207 30 28 chr2 138782585 138783064 -114473519 + MER74A LTR ERVL 22 558 0 2222 135 0 0 chr2 138783168 138783480 -114473103 + AluSx SINE Alu 1 312 0 236 75 0 25 chr2 138784242 138784282 -114472301 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 30 59 0 0 chr2 138786812 138786863 -114469720 + AT_rich Low_complexity Low_complexity 1 51 0 199 146 36 0 chr2 138786986 138787041 -114469542 + GA-rich Low_complexity Low_complexity 2 58 0 608 270 103 5 chr2 138787318 138787522 -114469061 + MLT1K LTR MaLR 352 575 -13 365 266 217 25 chr2 138787994 138788197 -114468386 + L1ME4a LINE L1 5876 6117 -4 3695 63 6 0 chr2 138788812 138789307 -114467276 - L1PA8 LINE L1 -313 5859 5362 777 152 33 14 chr2 138789314 138789397 -114467186 + L1MA7 LINE L1 5951 6031 -260 777 167 43 11 chr2 138789397 138789583 -114467000 + L1MA7 LINE L1 6090 6281 -10 344 297 43 65 chr2 138789683 138789821 -114466762 - MER5B DNA MER1_type -2 176 42 1707 276 138 33 chr2 138789833 138790738 -114465845 + L2 LINE L2 1563 2562 -752 528 250 40 0 chr2 138790749 138790873 -114465710 + MIR SINE MIR 34 162 -100 3264 136 62 12 chr2 138790873 138791489 -114465094 + MER39B LTR ERV1 1 622 0 602 304 94 58 chr2 138791677 138792295 -114464288 + L2 LINE L2 2573 3209 -104 257 147 73 9 chr2 138792369 138792478 -114464105 + (TA)n Simple_repeat Simple_repeat 2 117 0 24 0 0 0 chr2 138793505 138793529 -114463054 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr2 138794587 138794613 -114461970 + AT_rich Low_complexity Low_complexity 1 26 0 206 241 0 0 chr2 138794662 138794716 -114461867 + (TA)n Simple_repeat Simple_repeat 2 55 0 23 54 0 0 chr2 138794865 138794902 -114461681 + AT_rich Low_complexity Low_complexity 1 37 0 642 271 57 35 chr2 138795604 138795833 -114460750 - MIR SINE MIR -28 234 1 258 56 0 0 chr2 138795940 138795976 -114460607 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 2111 68 4 4 chr2 138795978 138796244 -114460339 - AluY SINE Alu -45 266 1 189 0 0 0 chr2 138796721 138796742 -114459841 + (TTCA)n Simple_repeat Simple_repeat 3 23 0 181 169 34 34 chr2 138798357 138798416 -114458167 + (TATATG)n Simple_repeat Simple_repeat 5 63 0 278 172 31 0 chr2 138798917 138798981 -114457602 + (CATATA)n Simple_repeat Simple_repeat 3 68 0 1562 107 62 0 chr2 138798992 138799236 -114457347 - MER7A DNA MER2_type -45 301 45 351 0 0 0 chr2 138799258 138799297 -114457286 + (TG)n Simple_repeat Simple_repeat 2 40 0 2186 116 0 0 chr2 138799461 138799753 -114456830 - AluSx SINE Alu -20 292 1 2952 211 12 20 chr2 138799850 138800500 -114456083 + MER82 DNA MER2_type 2 646 -7 498 33 0 0 chr2 138800516 138800576 -114456007 + (CA)n Simple_repeat Simple_repeat 2 61 0 807 288 76 37 chr2 138800997 138801664 -114454919 - L2 LINE L2 0 3313 2624 350 302 128 29 chr2 138801741 138801913 -114454670 + MIR3 SINE MIR 9 197 -11 224 338 124 34 chr2 138801904 138802348 -114454235 - L2 LINE L2 -1287 2027 1544 * 2073 108 3 7 chr2 138802401 138802688 -114453895 - AluSx SINE Alu -22 290 5 371 239 79 43 chr2 138802771 138803047 -114453536 - LTR16C LTR ERVL -37 454 65 434 315 16 0 chr2 138804369 138804496 -114452087 - L2 LINE L2 -8 3305 3177 225 249 132 117 chr2 138804707 138804980 -114451603 - L2 LINE L2 -445 2869 2593 404 239 15 122 chr2 138805098 138805295 -114451288 + MER5A DNA MER1_type 1 176 -13 1044 88 0 22 chr2 138805797 138805933 -114450650 + AluSc SINE Alu 1 133 -176 2211 121 0 10 chr2 138805933 138806231 -114450352 + AluSc SINE Alu 1 295 -14 413 342 19 6 chr2 138806742 138806900 -114449683 + MIR3 SINE MIR 42 201 -7 206 121 0 0 chr2 138807080 138807113 -114449470 + (A)n Simple_repeat Simple_repeat 1 33 0 270 303 155 28 chr2 138807797 138807962 -114448621 - MIR SINE MIR -12 196 17 700 196 36 21 chr2 138809425 138809619 -114446964 + L1MA8 LINE L1 5836 6032 -259 342 263 113 16 chr2 138809635 138809829 -114446754 + AluSg SINE Alu 4 178 -122 299 265 24 0 chr2 138810108 138810191 -114446392 - MIR SINE MIR -177 85 1 1869 28 0 0 chr2 138810549 138810763 -114445820 - AluYa5 SINE Alu 0 311 98 202 247 39 13 chr2 138811145 138811222 -114445361 + (TATG)n Simple_repeat Simple_repeat 2 80 0 216 67 0 0 chr2 138811255 138811285 -114445298 + (CA)n Simple_repeat Simple_repeat 2 31 0 37 52 0 0 chr2 138812140 138812198 -114444385 + AT_rich Low_complexity Low_complexity 1 58 0 396 287 287 42 chr2 138813946 138814256 -114442327 + LTR16A LTR ERVL 65 450 0 1080 76 0 0 chr2 138814859 138814990 -114441593 + AluY SINE Alu 1 131 -180 204 298 0 0 chr2 138815461 138815508 -114441075 + polypurine Low_complexity Low_complexity 2 48 0 217 311 0 0 chr2 138815945 138816006 -114440577 + (CATA)n Simple_repeat Simple_repeat 2 62 0 2215 106 0 0 chr2 138816395 138816679 -114439904 - AluSc SINE Alu -25 284 1 373 247 47 95 chr2 138820407 138820508 -114436075 + MIR SINE MIR 47 136 -126 623 111 0 0 chr2 138820508 138820598 -114435985 - L1PA14 LINE L1 -17 6144 6055 373 247 47 95 chr2 138820598 138820686 -114435897 + MIR SINE MIR 136 227 -35 858 86 47 0 chr2 138820708 138820836 -114435747 - Tigger1 DNA MER2_type -396 2022 1889 318 269 11 21 chr2 138821985 138822078 -114434505 + 7SK RNA RNA 7 98 -95 13456 141 20 35 chr2 138822135 138822320 -114434263 - Tigger1 DNA MER2_type 0 2418 2232 1738 180 20 10 chr2 138822320 138822620 -114433963 - AluJb SINE Alu 0 312 10 13456 141 20 35 chr2 138822620 138822716 -114433867 - Tigger1 DNA MER2_type -186 2232 2136 2326 65 0 7 chr2 138822716 138823007 -114433576 - AluY SINE Alu -22 289 1 13456 141 20 35 chr2 138823007 138825174 -114431409 - Tigger1 DNA MER2_type -282 2136 5 25 65 0 0 chr2 138825582 138825628 -114430955 + AT_rich Low_complexity Low_complexity 1 46 0 241 78 0 39 chr2 138826499 138826550 -114430033 + (TA)n Simple_repeat Simple_repeat 2 50 0 831 113 33 0 chr2 138829007 138829157 -114427426 + L1MA8 LINE L1 6132 6286 -5 338 326 58 12 chr2 138830737 138830909 -114425674 + MIR3 SINE MIR 20 199 -9 384 215 167 21 chr2 138831480 138831624 -114424959 - MER113 DNA MER1_type? -140 381 217 267 345 0 25 chr2 138831901 138832020 -114424563 - MIR SINE MIR -144 118 3 2073 132 13 7 chr2 138832350 138832660 -114423923 - AluJb SINE Alu 0 312 1 647 209 37 86 chr2 138832662 138832849 -114423734 + MER5B DNA MER1_type 1 178 0 226 274 147 20 chr2 138832886 138832988 -114423595 + MIR SINE MIR 30 144 -64 202 333 72 18 chr2 138834648 138834759 -114421824 - MIR SINE MIR -110 152 36 2545 143 12 7 chr2 138834884 138835316 -114421267 - L1PA16 LINE L1 -9 6157 5724 2718 193 29 10 chr2 138835317 138835934 -114420649 - L1 LINE L1 -1626 4520 3892 617 171 9 9 chr2 138836349 138836460 -114420123 + FLAM_C SINE Alu 7 117 -26 240 272 22 33 chr2 138836568 138836660 -114419923 - MER5B DNA MER1_type -25 153 63 236 309 41 52 chr2 138838700 138838884 -114417699 + MER5B DNA MER1_type 1 171 -7 2620 147 27 11 chr2 138839170 138839620 -114416963 + LTR32 LTR ERVL 15 471 0 738 257 6 16 chr2 138840219 138840402 -114416181 + MIR SINE MIR 82 262 0 1934 116 7 4 chr2 138840575 138840852 -114415731 + AluSc SINE Alu 25 302 -7 276 353 32 5 chr2 138840852 138841042 -114415541 + Charlie8 DNA MER1_type 85 279 -2138 223 366 42 21 chr2 138841244 138841386 -114415197 - MIR3 SINE MIR -57 151 7 1575 207 148 14 chr2 138842819 138843258 -114413325 + MLT1D LTR MaLR 8 505 0 202 225 0 0 chr2 138843291 138843331 -114413252 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 555 310 23 6 chr2 138843445 138843619 -114412964 + MIR SINE MIR 19 195 -67 228 308 0 0 chr2 138844388 138844453 -114412130 + L2 LINE L2 3201 3265 -7 266 185 37 74 chr2 138844456 138844537 -114412046 - MIR3 SINE MIR -32 176 99 218 382 103 22 chr2 138845088 138845360 -114411223 - L3b LINE CR1 -105 1478 1185 3652 134 36 43 chr2 138847079 138847736 -114408847 - Tigger3(Golem) DNA MER2_type 0 3028 2367 2053 126 14 0 chr2 138847736 138848055 -114408528 + AluSx SINE Alu 1 323 0 2183 114 3 0 chr2 138848062 138848352 -114408231 + AluSq SINE Alu 3 293 -20 3652 134 36 43 chr2 138848352 138848442 -114408141 - Tigger3(Golem) DNA MER2_type -667 2361 2276 468 243 9 0 chr2 138848432 138848539 -114408044 - Tigger3(Golem) DNA MER2_type -2921 108 1 * 332 252 126 8 chr2 138848540 138848667 -114407916 - L1ME LINE L1 -311 5810 5669 180 250 25 0 chr2 138848725 138848765 -114407818 + L2 LINE L2 2741 2781 -533 295 350 10 14 chr2 138849875 138850020 -114406563 - MIR3 SINE MIR -66 142 11 259 313 25 0 chr2 138850341 138850421 -114406162 - MIR SINE MIR -106 102 21 32 0 0 0 chr2 138853070 138853102 -114403481 + AT_rich Low_complexity Low_complexity 1 32 0 1291 235 22 14 chr2 138853141 138853503 -114403080 + L1ME2 LINE L1 5786 6150 -14 1631 147 40 15 chr2 138853583 138853855 -114402728 - AluJb SINE Alu -11 301 23 286 344 62 8 chr2 138853898 138854026 -114402557 - MIR SINE MIR -123 139 5 1076 244 51 30 chr2 138854159 138854491 -114402092 - MER2 DNA MER2_type -6 339 1 1765 162 18 21 chr2 138854564 138854904 -114401679 - MER44D DNA MER2_type 0 609 1 27 51 0 17 chr2 138856662 138856692 -114399891 + AT_rich Low_complexity Low_complexity 1 31 -27 5118 166 29 33 chr2 138856692 138857767 -114398816 - MER11C LTR ERVK 0 1071 1 27 51 0 17 chr2 138857767 138857795 -114398788 + AT_rich Low_complexity Low_complexity 31 58 0 1984 155 0 7 chr2 138858342 138858671 -114397912 + AluJb SINE Alu 1 327 0 228 35 0 0 chr2 138858974 138859003 -114397580 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 266 288 85 42 chr2 138859503 138859621 -114396962 + MIR SINE MIR 70 192 -70 300 136 85 17 chr2 138859870 138859929 -114396654 - MLT1I LTR MaLR 0 409 347 430 200 36 18 chr2 138860018 138860128 -114396455 - MER94 DNA DNA -11 123 12 363 202 25 25 chr2 138860258 138860377 -114396206 - MLT1J1 LTR MaLR -303 143 25 216 0 0 0 chr2 138861151 138861175 -114395408 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 400 319 14 14 chr2 138861404 138861542 -114395041 + MER5A DNA MER1_type 4 141 -48 2415 80 0 6 chr2 138862155 138862467 -114394116 + AluY SINE Alu 1 310 -1 1727 105 26 0 chr2 138864789 138865055 -114391528 - AluY SINE Alu -21 290 18 2126 148 39 25 chr2 138865839 138866198 -114390385 - THE1B LTR MaLR 0 364 1 393 205 0 0 chr2 138867418 138867496 -114389087 + MER116 DNA Mariner 3 80 0 441 365 73 9 chr2 138867633 138867866 -114388717 - MIR SINE MIR 0 262 15 183 162 0 0 chr2 138867974 138868011 -114388572 + L2 LINE L2 3017 3053 -219 183 256 12 93 chr2 138868395 138868481 -114388102 + L3 LINE CR1 1391 1469 -108 402 289 66 74 chr2 138870948 138871204 -114385379 + MIR SINE MIR 9 262 0 284 343 116 11 chr2 138871580 138871761 -114384822 + MIR SINE MIR 47 246 -16 274 248 119 0 chr2 138872449 138872558 -114384025 + MIR SINE MIR 21 142 -120 181 415 0 0 chr2 138872616 138872681 -114383902 - L2 LINE L2 -2 3311 3247 1893 158 7 3 chr2 138874145 138874455 -114382128 - AluSx SINE Alu -1 311 1 942 199 137 0 chr2 138874655 138874896 -114381687 + MER34C LTR ERV1 1 274 -311 280 311 17 14 chr2 138874897 138875110 -114381473 + MER34 LTR ERV1 11 300 -416 356 184 73 109 chr2 138875148 138875402 -114381181 + LTR49 LTR ERV1 391 595 0 753 211 116 67 chr2 138875421 138875748 -114380835 + MLT1E LTR MaLR 312 593 0 2862 133 11 0 chr2 138875982 138876425 -114380158 - L1PA16 LINE L1 -14 6152 5705 1667 117 0 4 chr2 138876974 138877205 -114379378 - AluSq SINE Alu -10 303 74 282 284 105 0 chr2 138877529 138877624 -114378959 - L2 LINE L2 -16 3297 3193 25 0 0 0 chr2 138877719 138877744 -114378839 + AT_rich Low_complexity Low_complexity 1 25 0 306 298 134 18 chr2 138877800 138877971 -114378612 + L1ME LINE L1 333 523 -5873 2412 254 67 56 chr2 138878403 138878629 -114377954 + L1ME LINE L1 789 1011 -5395 1941 198 51 25 chr2 138878629 138879078 -114377505 + MER65C LTR ERV1 1 461 0 2412 254 67 56 chr2 138879078 138879260 -114377323 + L1ME LINE L1 1011 1190 -5216 1859 164 3 10 chr2 138879260 138879552 -114377031 - AluJb SINE Alu -22 290 1 2412 254 67 56 chr2 138879552 138880934 -114375649 + L1ME LINE L1 1190 2587 -3819 23 0 0 0 chr2 138881050 138881073 -114375510 + AT_rich Low_complexity Low_complexity 1 23 0 356 193 20 14 chr2 138881203 138881284 -114375299 - MER2 DNA MER2_type -150 89 1 294 255 113 98 chr2 138881412 138881812 -114374771 - MLT1J LTR MaLR -5 506 101 263 200 267 0 chr2 138882702 138882777 -114373806 - MIR SINE MIR -81 127 33 316 244 189 31 chr2 138882862 138882989 -114373594 + MIR3 SINE MIR 13 159 -49 514 304 105 26 chr2 138884496 138884802 -114371781 - L1ME4a LINE L1 -44 6077 5748 268 330 0 23 chr2 138884863 138884951 -114371632 + L2 LINE L2 3228 3313 0 254 267 13 0 chr2 138885007 138885082 -114371501 - L1ME4a LINE L1 -529 5592 5517 987 187 16 0 chr2 138885335 138885517 -114371066 + MER58A DNA MER1_type 39 223 -1 1818 136 14 0 chr2 138886776 138887062 -114369521 - L1PA15 LINE L1 -9 6156 5867 225 269 15 0 chr2 138888605 138888672 -114367911 + (TTCA)n Simple_repeat Simple_repeat 1 68 0 552 366 57 30 chr2 138888689 138889091 -114367492 - L2 LINE L2 -31 3241 2829 307 308 110 7 chr2 138889283 138889429 -114367154 + MIR SINE MIR 40 200 -62 573 205 84 84 chr2 138889815 138890030 -114366553 - MER58C DNA MER1_type 0 215 1 293 331 88 7 chr2 138890917 138891053 -114365530 + MIR3 SINE MIR 50 196 -12 333 289 97 9 chr2 138891057 138891171 -114365412 - L2 LINE L2 -21 3292 3169 1718 168 0 27 chr2 138891255 138891552 -114365031 + AluJo SINE Alu 12 300 -12 424 265 61 34 chr2 138892725 138892872 -114363711 - L2 LINE L2 -5 3308 3158 1097 166 71 12 chr2 138893473 138893726 -114362857 - MER20B DNA MER1_type -1 782 515 666 267 40 40 chr2 138894325 138894576 -114362007 - MER20B DNA MER1_type -284 499 249 638 216 8 15 chr2 138894974 138895108 -114361475 + FLAM_C SINE Alu 1 133 0 975 224 58 84 chr2 138895138 138895566 -114361017 + MLT1D LTR MaLR 89 505 0 2143 127 140 8 chr2 138895773 138896151 -114360432 + MSTA LTR MaLR 1 428 0 182 304 25 38 chr2 138896154 138896233 -114360350 + L2 LINE L2 2999 3076 -196 280 258 142 33 chr2 138896326 138896446 -114360137 + L2 LINE L2 3177 3309 -4 2392 83 0 0 chr2 138896494 138896796 -114359787 + AluY SINE Alu 1 302 -9 1031 211 79 84 chr2 138896975 138897391 -114359192 + MLT1C LTR MaLR 6 419 -48 1010 167 5 11 chr2 138897391 138897577 -114359006 + MER6B DNA MER2_type 1 185 -25 645 262 20 0 chr2 138897903 138898052 -114358531 + MIR SINE MIR 111 262 0 2455 179 64 61 chr2 138899459 138900080 -114356503 + MLT1E2 LTR MaLR 1 623 -3 398 319 51 28 chr2 138900254 138900470 -114356113 + MLT1H LTR MaLR 104 324 -225 316 215 0 0 chr2 138900713 138900778 -114355805 - MER116 DNA Mariner 0 80 16 1839 153 11 0 chr2 138901097 138901429 -114355154 + AluSx SINE Alu 1 335 0 234 297 203 20 chr2 138901869 138902017 -114354566 + MLT1J LTR MaLR 24 198 -313 553 271 80 0 chr2 138904692 138904880 -114351703 + MER58A DNA MER1_type 2 204 -20 366 325 185 6 chr2 138905242 138905399 -114351184 - MIR SINE MIR -50 212 28 6109 26 0 3 chr2 138905765 138906525 -114350058 - L1P LINE L1 -968 5178 4421 2270 88 0 28 chr2 138907018 138907336 -114349247 - AluSc SINE Alu 0 309 1 414 0 0 0 chr2 138907634 138907680 -114348903 + (CA)n Simple_repeat Simple_repeat 2 47 0 366 342 107 0 chr2 138907753 138907902 -114348681 + MIR3 SINE MIR 31 195 -13 323 345 117 0 chr2 138908166 138908311 -114348272 + MIR SINE MIR 4 165 -97 1337 197 60 7 chr2 138908401 138908670 -114347913 + AluJo SINE Alu 1 283 -29 2030 96 0 4 chr2 138910936 138911208 -114345375 + AluY SINE Alu 36 306 -5 205 333 10 62 chr2 138911697 138911793 -114344790 - MIR SINE MIR -64 144 54 310 314 76 17 chr2 138912521 138912639 -114343944 - L2 LINE L2 -14 3258 3134 258 283 105 40 chr2 138912841 138912993 -114343590 - L3b LINE CR1 -173 1410 1249 195 42 0 0 chr2 138913358 138913382 -114343201 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 1970 158 24 13 chr2 138913492 138913873 -114342710 - L1MA9 LINE L1 -218 6094 5710 23 0 0 0 chr2 138914442 138914465 -114342118 + AT_rich Low_complexity Low_complexity 1 23 0 1351 206 46 56 chr2 138915656 138916050 -114340533 - MLT1B LTR MaLR 0 390 1 203 287 148 35 chr2 138917018 138917088 -114339495 + MIR SINE MIR 73 134 -128 2345 87 0 0 chr2 138917088 138917377 -114339206 + AluY SINE Alu 6 294 -17 203 287 148 35 chr2 138917377 138917421 -114339162 + MIR SINE MIR 134 200 -62 1313 288 89 50 chr2 138918362 138919021 -114337562 + MER115 DNA AcHobo 9 693 0 1118 232 138 77 chr2 138919158 138920184 -114336399 - L1MC5 LINE L1 -32 7929 6841 302 273 83 66 chr2 138920420 138920541 -114336042 - HAL1 LINE L1 -6 2501 2379 417 86 0 0 chr2 138920650 138920708 -114335875 + (TA)n Simple_repeat Simple_repeat 1 58 0 189 0 0 0 chr2 138920713 138920734 -114335849 + (CA)n Simple_repeat Simple_repeat 1 21 0 2858 0 0 3 chr2 138921096 138921407 -114335176 + AluY SINE Alu 1 310 -1 563 321 72 0 chr2 138921611 138921832 -114334751 + MIR SINE MIR 20 256 -6 512 290 120 0 chr2 138921865 138922048 -114334535 + MIR SINE MIR 1 205 -57 248 292 14 28 chr2 138922065 138922137 -114334446 + L2 LINE L2 3210 3280 -33 32 57 0 0 chr2 138923248 138923301 -114333282 + AT_rich Low_complexity Low_complexity 1 53 0 238 89 89 22 chr2 138923399 138923444 -114333139 - L2 LINE L2 0 3313 3266 233 218 0 18 chr2 138923411 138923466 -114333117 - MIR SINE MIR -9 253 200 * 2154 119 6 13 chr2 138923883 138924194 -114332389 - AluSq SINE Alu -4 309 1 796 174 33 19 chr2 138924363 138924575 -114332008 + L1MA4 LINE L1 6084 6298 -2 345 295 44 107 chr2 138924616 138924842 -114331741 + MIR3 SINE MIR 8 216 -46 310 262 58 10 chr2 138925679 138925782 -114330801 - L3b LINE CR1 -122 1461 1354 545 224 31 36 chr2 138925988 138926180 -114330403 + L1MC5 LINE L1 7339 7529 -432 2167 230 39 21 chr2 138926487 138927108 -114329475 + L1ME1 LINE L1 5503 6134 -32 342 313 10 0 chr2 138927822 138927918 -114328665 - MIR SINE MIR -63 145 49 1530 159 52 4 chr2 138929667 138929938 -114326645 + AluJb SINE Alu 1 284 -28 2174 124 3 0 chr2 138933487 138933786 -114322797 - AluSq SINE Alu -13 300 1 198 0 0 0 chr2 138933834 138933856 -114322727 + (T)n Simple_repeat Simple_repeat 1 22 0 4782 35 0 0 chr2 138933983 138934553 -114322030 - L1PA4 LINE L1 0 6155 5586 438 20 0 0 chr2 138934984 138935035 -114321548 + (CA)n Simple_repeat Simple_repeat 2 52 0 539 266 56 93 chr2 138935036 138935359 -114321224 + L1MC/D LINE L1 5452 5762 -2046 3343 76 32 13 chr2 138935381 138935853 -114320730 - L1PA7 LINE L1 -6 6148 5668 12200 213 48 11 chr2 138935979 138939009 -114317574 - L1P4 LINE L1 -399 5767 2573 519 274 0 0 chr2 138939009 138939126 -114317457 + FLAM_A SINE Alu 2 118 -15 12200 213 48 11 chr2 138939126 138939798 -114316785 - L1P4 LINE L1 -3593 2573 1927 * 15546 53 6 1 chr2 138939792 138941870 -114314713 + L1P LINE L1 2397 4485 -1661 484 321 54 12 chr2 138942483 138942651 -114313932 - MIR SINE MIR -54 208 34 247 25 50 0 chr2 138943114 138943154 -114313429 + (TTG)n Simple_repeat Simple_repeat 1 42 0 263 151 0 0 chr2 138944074 138944127 -114312456 + L1MB4 LINE L1 6126 6178 -2 2213 92 0 0 chr2 138944310 138944592 -114311991 + AluSg1 SINE Alu 15 296 -13 324 0 0 0 chr2 138944770 138944806 -114311777 + (CA)n Simple_repeat Simple_repeat 1 36 0 2411 83 0 0 chr2 138944964 138945264 -114311319 - AluY SINE Alu -11 300 1 235 339 74 32 chr2 138946041 138946230 -114310353 - MIR SINE MIR -65 197 1 742 297 74 60 chr2 138947262 138947861 -114308722 - L2 LINE L2 -13 3259 2659 50 0 0 0 chr2 138947883 138947933 -114308650 + AT_rich Low_complexity Low_complexity 1 50 0 291 286 19 106 chr2 138947959 138948120 -114308463 + MIR SINE MIR 70 216 -46 405 0 0 0 chr2 138949695 138949740 -114306843 + (TG)n Simple_repeat Simple_repeat 2 46 0 3598 67 40 4 chr2 138950043 138950538 -114306045 - LTR10D LTR ERV1 0 513 1 241 313 81 10 chr2 138950842 138950941 -114305642 + MIR SINE MIR 16 121 -87 1898 204 43 18 chr2 138950954 138951352 -114305231 - MER54A LTR ERVL 0 901 494 213 221 73 15 chr2 138951465 138951533 -114305050 + MIR3 SINE MIR 124 195 -13 1190 115 6 0 chr2 138955005 138955162 -114301421 - AluSq SINE Alu -23 290 133 1822 99 20 111 chr2 138955164 138955508 -114301075 - AluYb8 SINE Alu -5 313 1 1319 205 104 29 chr2 138955856 138956290 -114300293 + MER31B LTR ERV1 2 543 0 1655 232 265 32 chr2 138956532 138957347 -114299236 - L1MC4 LINE L1 -280 7762 6758 1103 274 51 28 chr2 138957348 138957742 -114298841 - L1MC4 LINE L1 -2103 5705 5303 216 0 0 0 chr2 138959692 138959716 -114296867 + (TA)n Simple_repeat Simple_repeat 1 24 0 3464 195 69 62 chr2 138960183 138960745 -114295838 + L1MC2 LINE L1 441 997 -5543 1974 142 6 25 chr2 138960745 138961063 -114295520 + AluSx SINE Alu 1 312 0 2477 62 0 16 chr2 138961072 138961381 -114295202 + AluY SINE Alu 1 304 -7 3464 195 69 62 chr2 138961381 138961411 -114295172 + L1MC2 LINE L1 1004 1032 -5508 1080 193 159 41 chr2 138961411 138961681 -114294902 + AluJo SINE Alu 1 302 0 3464 195 69 62 chr2 138961681 138961706 -114294877 + L1MC2 LINE L1 1032 1055 -5485 1144 172 43 30 chr2 138961706 138961938 -114294645 - MER46A DNA MER2_type 0 236 2 3464 195 69 62 chr2 138961938 138962851 -114293732 + L1MC2 LINE L1 1055 1990 -4550 1802 165 0 13 chr2 138962851 138963167 -114293416 - AluJb SINE Alu 0 312 1 3464 195 69 62 chr2 138963167 138963220 -114293363 + L1MC2 LINE L1 1990 2041 -4499 1260 193 75 0 chr2 138963220 138963500 -114293083 + L1 LINE L1 4986 5286 -860 1908 194 94 6 chr2 138963543 138964042 -114292541 + L1MC2 LINE L1 2031 2573 -3967 1380 201 0 39 chr2 138964050 138964334 -114292249 + AluJb SINE Alu 37 309 -3 6116 227 57 33 chr2 138964353 138966477 -114290106 + L1MC2 LINE L1 2589 4762 -1778 2269 197 29 12 chr2 138966489 138967068 -114289515 - L1PA16 LINE L1 0 6166 5578 240 186 31 62 chr2 138967660 138967821 -114288762 + (TATAA)n Simple_repeat Simple_repeat 3 158 0 295 250 33 0 chr2 138970774 138970834 -114285749 - MIR SINE MIR -168 94 33 908 234 42 0 chr2 138971108 138971322 -114285261 - MER58A DNA MER1_type 0 224 2 41 21 0 0 chr2 138972042 138972090 -114284493 + AT_rich Low_complexity Low_complexity 1 48 0 1744 90 0 0 chr2 138972223 138972456 -114284127 + L1PA8 LINE L1 5939 6171 -1 181 333 0 0 chr2 138972653 138972701 -114283882 - L3 LINE CR1 -669 908 861 21 36 0 0 chr2 138974730 138974758 -114281825 + AT_rich Low_complexity Low_complexity 1 28 0 1776 194 41 19 chr2 138975476 138975842 -114280741 - MLT1A2 LTR MaLR 0 374 1 216 381 76 13 chr2 138975865 138976101 -114280482 - L3b LINE CR1 -115 1468 1218 196 330 89 0 chr2 138976616 138976728 -114279855 - L2 LINE L2 -2 3311 3190 896 245 63 21 chr2 138977031 138977268 -114279315 + Tigger7 DNA MER2_type 18 264 -2223 409 235 0 31 chr2 138977270 138977368 -114279215 + Tigger7 DNA MER2_type 2390 2484 -3 1955 204 171 24 chr2 138977578 138978128 -114278455 + L1ME3A LINE L1 5535 6165 -5 * 2153 195 54 33 chr2 138978122 138978759 -114277824 + L1MC2 LINE L1 5425 6073 -665 603 193 0 52 chr2 138978759 138978894 -114277689 + FLAM_A SINE Alu 1 128 -5 2153 195 54 33 chr2 138978894 138978978 -114277605 + L1MC2 LINE L1 6073 6154 -584 1281 227 143 38 chr2 138978983 138979486 -114277097 + MER34B LTR ERV1 5 560 -5 1020 122 24 0 chr2 138979490 138979654 -114276929 + L1MC2 LINE L1 6151 6318 -420 2060 134 39 18 chr2 138979654 138979989 -114276594 + MER7A DNA MER2_type 2 341 -5 2015 156 9 44 chr2 138980003 138980432 -114276151 + L1MC2 LINE L1 6325 6738 0 2174 100 3 19 chr2 138980770 138981081 -114275502 - AluSq SINE Alu -7 306 1 209 319 44 9 chr2 138981886 138981999 -114274584 + L2 LINE L2 2133 2249 -1065 324 262 149 0 chr2 138982386 138982527 -114274056 - MIR SINE MIR -87 175 14 22 0 0 0 chr2 138982697 138982719 -114273864 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr2 138984462 138984482 -114272101 + (A)n Simple_repeat Simple_repeat 1 20 0 907 266 55 4 chr2 138984552 138984789 -114271794 + MIR SINE MIR 12 260 -2 372 250 107 9 chr2 138984976 138985088 -114271495 - MIR3 SINE MIR -36 172 50 207 319 106 21 chr2 138985120 138985214 -114271369 + MIR3 SINE MIR 10 111 -97 22 0 0 0 chr2 138985671 138985693 -114270890 + AT_rich Low_complexity Low_complexity 1 22 0 309 261 92 7 chr2 138986307 138986449 -114270134 + L1ME4a LINE L1 5762 5915 -206 215 371 19 0 chr2 138986554 138986659 -114269924 + L2 LINE L2 2948 3054 -259 641 288 80 37 chr2 138987230 138987545 -114269038 - L1ME3 LINE L1 -317 5845 5512 900 184 18 57 chr2 138987545 138987773 -114268810 - MER20 DNA MER1_type 0 219 1 641 288 80 37 chr2 138987773 138987808 -114268775 - L1ME3 LINE L1 -650 5512 5480 310 248 71 9 chr2 138988320 138988433 -114268150 - MIR SINE MIR -132 130 11 2122 142 0 32 chr2 138991494 138991838 -114264745 - MER1B DNA MER1_type -4 333 1 303 127 191 0 chr2 138992173 138992236 -114264347 + MLT1C LTR MaLR 1 75 -392 427 192 13 0 chr2 138992237 138992315 -114264268 + MER57A LTR ERV1 295 373 -30 264 122 0 0 chr2 138992315 138992356 -114264227 + (A)n Simple_repeat Simple_repeat 1 41 0 1001 173 123 73 chr2 138992356 138992697 -114263886 + MLT1C LTR MaLR 64 467 0 2385 219 59 10 chr2 138993242 138993835 -114262748 - MLT1E2 LTR MaLR 0 626 5 325 313 100 57 chr2 138995817 138996117 -114260466 - L2 LINE L2 -436 2878 2566 237 274 80 44 chr2 138996291 138996404 -114260179 - L2 LINE L2 0 3313 3197 301 292 96 57 chr2 138996587 138996796 -114259787 - LTR33 LTR ERVL 0 521 305 2008 156 43 62 chr2 138996805 138997227 -114259356 - MLT2D LTR ERVL 0 414 1 482 191 36 0 chr2 138997309 138997419 -114259164 + MER5A DNA MER1_type 1 114 -75 220 306 0 14 chr2 138998689 138998761 -114257822 + MIR SINE MIR 175 245 -17 23 33 0 0 chr2 139000149 139000179 -114256404 + AT_rich Low_complexity Low_complexity 1 30 0 507 184 133 10 chr2 139000179 139000277 -114256306 - FLAM_A SINE Alu -21 121 12 227 224 35 0 chr2 139002068 139002126 -114254457 - MIR SINE MIR -47 215 156 783 323 83 3 chr2 139002146 139002471 -114254112 - MLT1I LTR MaLR 0 409 59 266 177 16 109 chr2 139002491 139002607 -114253976 - MIR SINE MIR -68 140 34 795 210 148 18 chr2 139002733 139002962 -114253621 + MIR SINE MIR 3 261 -1 186 333 17 17 chr2 139005395 139005455 -114251128 + L2 LINE L2 3025 3084 -188 1834 178 111 9 chr2 139005588 139005829 -114250754 - MLT1C LTR MaLR 0 467 252 333 0 0 0 chr2 139005829 139005866 -114250717 + (TG)n Simple_repeat Simple_repeat 2 38 0 1834 178 111 9 chr2 139005866 139006046 -114250537 - MLT1C LTR MaLR -215 252 3 278 282 105 40 chr2 139006067 139006191 -114250392 + L2 LINE L2 3137 3268 -4 1627 177 0 37 chr2 139006230 139006377 -114250206 + AluJo SINE Alu 1 133 -179 2160 85 13 41 chr2 139006377 139006694 -114249889 + AluSc SINE Alu 1 308 -1 1627 177 0 37 chr2 139006694 139006846 -114249737 + AluJo SINE Alu 133 289 -23 198 171 0 0 chr2 139008267 139008308 -114248275 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 319 204 19 157 chr2 139009777 139009885 -114246698 + Charlie1b DNA MER1_type 14 106 -417 1556 194 69 29 chr2 139009927 139010345 -114246238 + Charlie1b DNA MER1_type 80 514 -9 516 202 79 9 chr2 139010359 139010473 -114246110 + MIR SINE MIR 140 261 -1 246 312 75 32 chr2 139010921 139011014 -114245569 + L2 LINE L2 3175 3271 -1 1744 181 72 76 chr2 139013917 139014432 -114242151 + Charlie1b DNA MER1_type 6 518 -5 379 259 59 7 chr2 139015116 139015251 -114241332 + L1ME3A LINE L1 6027 6168 -2 21 36 0 0 chr2 139015471 139015499 -114241084 + AT_rich Low_complexity Low_complexity 1 28 0 986 287 102 28 chr2 139015541 139016186 -114240397 - HAL1 LINE L1 -5 2502 1810 1212 237 96 7 chr2 139016283 139016688 -114239895 - L1M4 LINE L1 -1562 4584 4144 1041 250 57 17 chr2 139016701 139017160 -114239423 - L1ME3A LINE L1 -220 5949 1 507 302 84 8 chr2 139018047 139018268 -114238315 + MIR SINE MIR 30 262 0 1897 115 0 0 chr2 139019804 139020057 -114236526 + AluSq SINE Alu 1 253 -60 266 356 19 0 chr2 139020256 139020360 -114236223 + MIR3 SINE MIR 49 154 -54 627 266 128 75 chr2 139020736 139020980 -114235603 - L2 LINE L2 0 3313 3083 1541 177 8 4 chr2 139020980 139021240 -114235343 + AluJb SINE Alu 39 299 -13 627 266 128 75 chr2 139021240 139021465 -114235118 - L2 LINE L2 -230 3083 2819 202 298 69 99 chr2 139021833 139021964 -114234619 - L3b LINE CR1 -172 1411 1285 2200 119 0 0 chr2 139022553 139022855 -114233728 - AluSq SINE Alu -11 302 1 278 296 34 0 chr2 139023245 139023333 -114233250 + L2 LINE L2 3173 3263 -9 313 320 31 0 chr2 139023342 139023439 -114233144 + MIR3 SINE MIR 83 182 -26 2319 92 3 3 chr2 139025720 139026025 -114230558 - AluY SINE Alu -4 307 3 195 359 102 6 chr2 139026950 139027117 -114229466 - MIR SINE MIR -72 190 8 1819 177 3 0 chr2 139028612 139028923 -114227660 + AluJo SINE Alu 1 312 0 3225 176 78 11 chr2 139029093 139029746 -114226837 + MER44D DNA MER2_type 9 705 0 204 111 0 0 chr2 139029891 139029927 -114226656 + (TA)n Simple_repeat Simple_repeat 1 36 0 1352 194 71 17 chr2 139030166 139030501 -114226082 - AluJo SINE Alu 0 353 3 714 293 57 30 chr2 139030507 139031132 -114225451 - L1ME LINE L1 -462 5700 5055 273 324 7 28 chr2 139031150 139031292 -114225291 - L1ME LINE L1 -1200 4946 4808 192 268 0 110 chr2 139031442 139031524 -114225059 - L2 LINE L2 -35 3278 3206 1519 113 41 0 chr2 139031650 139031871 -114224712 - MER30 DNA MER1_type 0 230 1 520 138 0 0 chr2 139034939 139035019 -114221564 + MADE1 DNA Mariner 1 80 0 271 127 73 0 chr2 139036411 139036466 -114220117 + MLT1C LTR MaLR 27 85 -420 5686 101 9 14 chr2 139036510 139037368 -114219215 - L1MA1 LINE L1 0 6302 5449 20986 192 38 9 chr2 139037368 139042182 -114214401 - L1 LINE L1 -876 6689 1626 1934 134 134 28 chr2 139042182 139042569 -114214014 + MSTA LTR MaLR 1 428 0 20986 192 38 9 chr2 139042569 139044223 -114212360 - L1 LINE L1 -5939 1626 21 903 213 99 10 chr2 139044290 139044543 -114212040 + MLT1C LTR MaLR 189 432 0 337 266 156 19 chr2 139045823 139045977 -114210606 + MIR SINE MIR 47 221 -41 2551 125 25 54 chr2 139046121 139046562 -114210021 - MSTA LTR MaLR 0 428 1 1219 171 0 0 chr2 139047084 139047277 -114209306 - MER46A DNA MER2_type 0 236 44 23 54 0 0 chr2 139047464 139047501 -114209082 + AT_rich Low_complexity Low_complexity 1 37 0 349 204 57 11 chr2 139047566 139047654 -114208929 - L3 LINE CR1 -2 1575 1484 860 261 30 17 chr2 139047674 139047908 -114208675 + MIR SINE MIR 13 249 -13 1494 105 26 4 chr2 139048931 139049254 -114207329 + L1PA10 LINE L1 5166 5500 -668 1155 110 33 6 chr2 139049254 139049421 -114207162 + L1PA10 LINE L1 5966 6152 -16 369 93 0 0 chr2 139050954 139051008 -114205575 + (TTATA)n Simple_repeat Simple_repeat 2 55 0 1997 133 11 0 chr2 139051011 139051296 -114205287 - AluSq SINE Alu -25 288 1 1121 174 95 4 chr2 139051309 139051551 -114205032 - L1MD3 LINE L1 0 7995 7732 192 40 0 0 chr2 139051706 139051731 -114204852 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 309 285 87 29 chr2 139052043 139052215 -114204368 - L1M4 LINE L1 -1065 5081 4900 2738 158 161 121 chr2 139052379 139052833 -114203750 - L1MC3 LINE L1 -40 7745 7311 1738 184 3 0 chr2 139052833 139053126 -114203457 - AluJb SINE Alu -18 294 1 2738 158 161 121 chr2 139053126 139053234 -114203349 - L1MC3 LINE L1 -474 7311 7209 274 295 0 11 chr2 139053234 139053329 -114203254 - MLT1F1 LTR MaLR -450 117 24 2738 158 161 121 chr2 139053329 139053506 -114203077 - L1MC3 LINE L1 -576 7209 7041 240 35 0 0 chr2 139053506 139053535 -114203048 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2738 158 161 121 chr2 139053535 139053702 -114202881 - L1MC3 LINE L1 -744 7041 6703 497 320 70 32 chr2 139053728 139053836 -114202747 + L1MC/D LINE L1 3797 3899 -2247 4210 160 67 69 chr2 139053836 139054909 -114201674 - MER11C LTR ERVK 0 1071 1 497 320 70 32 chr2 139054909 139055144 -114201439 + L1MC/D LINE L1 3899 4153 -1993 492 288 89 34 chr2 139055314 139055751 -114200832 + L1MC/D LINE L1 4387 4847 -1299 380 81 0 32 chr2 139055829 139055891 -114200692 + (TCTA)n Simple_repeat Simple_repeat 1 60 0 1645 167 4 14 chr2 139055895 139056176 -114200407 - AluJb SINE Alu -34 278 1 419 312 116 29 chr2 139056329 139056707 -114199876 + L1MC/D LINE L1 5410 5820 -1988 7336 52 0 3 chr2 139057630 139059338 -114197245 - L1PA5 LINE L1 0 6154 4450 1477 238 39 39 chr2 139059473 139059799 -114196784 - L1ME2 LINE L1 -7 6157 5829 1825 223 115 12 chr2 139059799 139060293 -114196290 + MER44D DNA MER2_type 5 604 -1 1477 238 39 39 chr2 139060293 139060457 -114196126 - L1ME2 LINE L1 -334 5830 5667 1885 206 47 95 chr2 139060473 139061181 -114195402 - L1ME2 LINE L1 -908 5238 4565 * 1969 267 101 19 chr2 139061174 139062553 -114194030 - L1ME2 LINE L1 -210 6749 5236 1381 241 141 35 chr2 139062625 139063182 -114193401 - L1ME2 LINE L1 -4662 2279 1632 2163 117 0 3 chr2 139063182 139063473 -114193110 - AluSc SINE Alu -19 290 1 1381 241 141 35 chr2 139063473 139063830 -114192753 - L1ME2 LINE L1 -5309 1632 1314 228 295 77 69 chr2 139064956 139065305 -114191278 - L1ME2 LINE L1 -6023 400 49 252 214 20 41 chr2 139065330 139065428 -114191155 - L1M4 LINE L1 -1194 4952 4857 23 33 0 0 chr2 139066413 139066443 -114190140 + AT_rich Low_complexity Low_complexity 1 30 0 251 247 25 25 chr2 139067055 139067136 -114189447 + (TATATG)n Simple_repeat Simple_repeat 4 84 0 4371 184 35 18 chr2 139067660 139068848 -114187735 - L1MD1 LINE L1 -14 6228 5018 895 248 73 3 chr2 139068865 139069179 -114187404 - L1MD1 LINE L1 -1172 4974 4639 7053 47 8 4 chr2 139069214 139070748 -114185835 - L1PA5 LINE L1 -6 6148 4608 184 218 36 36 chr2 139070889 139070944 -114185639 + MIR SINE MIR 97 151 -111 2325 201 87 47 chr2 139070944 139071283 -114185300 - MER82 DNA MER2_type 0 653 276 1506 158 9 80 chr2 139071283 139071450 -114185133 + AluJb SINE Alu 1 134 -178 2224 107 3 13 chr2 139071450 139071758 -114184825 + AluSp SINE Alu 1 305 -8 1506 158 9 80 chr2 139071758 139071926 -114184657 + AluJb SINE Alu 134 312 0 2325 201 87 47 chr2 139071926 139072207 -114184376 - MER82 DNA MER2_type -377 276 8 317 132 0 0 chr2 139072724 139072777 -114183806 - L1PA5 LINE L1 -102 6052 6000 808 73 0 0 chr2 139072777 139072886 -114183697 + L1PA5 LINE L1 6043 6151 -3 341 292 146 8 chr2 139073333 139073463 -114183120 - L2 LINE L2 0 3272 3125 2350 100 6 3 chr2 139077666 139077977 -114178606 + AluSq SINE Alu 1 312 -1 240 35 0 0 chr2 139078068 139078097 -114178486 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 410 312 52 57 chr2 139080327 139080750 -114175833 + L1ME3A LINE L1 4674 5094 -1052 1086 266 144 48 chr2 139080838 139081461 -114175122 + L1ME3A LINE L1 5478 6160 -10 265 261 59 34 chr2 139082189 139082308 -114174275 - MER112 DNA MER1_type -11 249 128 454 325 13 6 chr2 139084370 139084527 -114172056 + MIR3 SINE MIR 36 193 -15 1697 236 107 5 chr2 139084937 139085377 -114171206 + MLT1D LTR MaLR 21 505 0 327 344 73 66 chr2 139085440 139085728 -114170855 - L2 LINE L2 -6 3266 2977 342 0 0 0 chr2 139085827 139085865 -114170718 + (TTA)n Simple_repeat Simple_repeat 2 39 0 1633 187 28 0 chr2 139086484 139086800 -114169783 + AluJb SINE Alu 1 312 0 233 267 0 0 chr2 139086836 139086896 -114169687 - MER2 DNA MER2_type -7 338 279 1194 176 0 0 chr2 139086947 139087157 -114169426 - MER2 DNA MER2_type -135 210 1 26 0 0 0 chr2 139087821 139087847 -114168736 + AT_rich Low_complexity Low_complexity 1 26 0 274 398 111 22 chr2 139087883 139088207 -114168376 + L3b LINE CR1 1192 1544 -39 232 346 22 66 chr2 139089088 139089224 -114167359 - MIR SINE MIR -6 256 127 311 316 20 0 chr2 139089451 139089549 -114167034 + MIR SINE MIR 48 147 -115 666 260 141 46 chr2 139089893 139090402 -114166181 + MLT1H1 LTR MaLR 1 547 -8 268 263 250 32 chr2 139090456 139090612 -114165971 - MIR SINE MIR -55 207 18 30 27 0 0 chr2 139090702 139090739 -114165844 + AT_rich Low_complexity Low_complexity 1 37 0 185 369 58 19 chr2 139090750 139090853 -114165730 + MIR SINE MIR 2 108 -154 21 0 0 0 chr2 139090871 139090892 -114165691 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 139092272 139092301 -114164282 + AT_rich Low_complexity Low_complexity 1 29 0 1957 155 0 19 chr2 139093803 139094119 -114162464 - AluJb SINE Alu -2 310 1 263 220 0 0 chr2 139095301 139095351 -114161232 - L2 LINE L2 -2 3311 3262 256 300 0 0 chr2 139095663 139095723 -114160860 + L2 LINE L2 3254 3313 0 368 324 88 19 chr2 139097473 139097681 -114158902 - MIR SINE MIR -8 254 34 313 254 90 99 chr2 139101594 139101795 -114154788 - L1M2 LINE L1 -5872 977 779 2429 31 41 0 chr2 139103650 139103940 -114152643 - AluY SINE Alu -9 302 1 1714 270 105 23 chr2 139104349 139105243 -114151340 - L2 LINE L2 -14 3299 2321 222 240 0 80 chr2 139105259 139105334 -114151249 + MIR SINE MIR 194 262 0 379 202 67 10 chr2 139105383 139105487 -114151096 + L1ME1 LINE L1 6053 6162 -4 297 256 22 11 chr2 139105567 139105657 -114150926 + L1MC4 LINE L1 7160 7250 -792 1653 117 109 15 chr2 139105665 139106083 -114150500 + MER51A LTR ERV1 1 556 -78 2345 78 0 41 chr2 139106083 139106402 -114150181 - AluY SINE Alu -5 306 1 1653 117 109 15 chr2 139106402 139106490 -114150093 + MER51A LTR ERV1 556 634 0 437 248 113 40 chr2 139106618 139107041 -114149542 + L1MC5 LINE L1 7281 7734 -227 383 249 109 12 chr2 139107174 139107339 -114149244 + L1MC/D LINE L1 2833 3013 -3133 3785 169 54 4 chr2 139107810 139108592 -114147991 - L1MB8 LINE L1 -72 6106 5286 207 258 0 32 chr2 139108682 139108744 -114147839 + GA-rich Low_complexity Low_complexity 3 62 0 502 293 70 100 chr2 139108744 139109262 -114147321 + L1MC/D LINE L1 3607 4108 -2038 383 292 135 50 chr2 139109373 139109736 -114146847 + L1MC/D LINE L1 4290 4683 -1463 344 281 59 26 chr2 139109816 139110086 -114146497 + L1MC/D LINE L1 4789 5067 -1079 542 247 75 4 chr2 139110224 139110489 -114146094 + L1MC/D LINE L1 5258 5548 -614 23 33 0 0 chr2 139110695 139110725 -114145858 + AT_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr2 139110870 139110896 -114145687 + AT_rich Low_complexity Low_complexity 1 26 0 378 143 14 29 chr2 139111065 139111135 -114145448 + Tigger2 DNA MER2_type 1 69 -2649 * 2336 153 27 14 chr2 139111125 139111564 -114145019 + Tigger2 DNA MER2_type 2273 2717 -1 863 320 72 29 chr2 139111830 139113203 -114143380 + L1MC/D LINE L1 3596 5027 -1119 1850 232 49 20 chr2 139113346 139113837 -114142746 - MLT1D LTR MaLR 0 505 1 23 0 0 0 chr2 139113866 139113889 -114142694 + AT_rich Low_complexity Low_complexity 1 23 0 1373 286 23 5 chr2 139113974 139114408 -114142175 + L1MC/D LINE L1 5270 5711 -2097 772 146 0 22 chr2 139115738 139115901 -114140682 - AluJb SINE Alu 0 312 170 644 255 80 38 chr2 139116070 139116282 -114140301 + MER58A DNA MER1_type 1 221 -3 947 290 80 6 chr2 139117070 139117422 -114139161 - MLT1I LTR MaLR -10 399 22 509 208 112 0 chr2 139117476 139117601 -114138982 + MIR SINE MIR 98 236 -26 2513 67 0 0 chr2 139118976 139119274 -114137309 - AluSx SINE Alu -14 298 1 2300 80 7 10 chr2 139121035 139121334 -114135249 - AluY SINE Alu -13 298 1 454 314 72 49 chr2 139121695 139121959 -114134624 + L3 LINE CR1 1071 1340 -237 320 312 83 18 chr2 139121983 139122092 -114134491 - L3 LINE CR1 -37 1540 1425 374 327 97 35 chr2 139122147 139122373 -114134210 - L3 LINE CR1 -289 1288 1049 385 304 47 27 chr2 139123948 139124096 -114132487 - MIR3 SINE MIR -7 201 51 1848 131 139 68 chr2 139124458 139124498 -114132085 - MSTA LTR MaLR -2 426 390 1491 125 213 0 chr2 139124498 139124738 -114131845 + AluSx SINE Alu 1 291 -21 246 32 0 0 chr2 139124741 139124772 -114131811 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1848 131 139 68 chr2 139124772 139125123 -114131460 - MSTA LTR MaLR -39 389 3 1326 163 118 45 chr2 139125767 139126056 -114130527 - AluJo SINE Alu 0 312 3 235 278 21 90 chr2 139128024 139128168 -114128415 + L2 LINE L2 2974 3107 -165 27 29 0 0 chr2 139130368 139130402 -114126181 + AT_rich Low_complexity Low_complexity 1 34 0 351 233 0 35 chr2 139130409 139130525 -114126058 - MER103 DNA DNA -51 115 4 748 186 136 40 chr2 139130624 139130823 -114125760 + MER20 DNA MER1_type 1 218 -1 1787 168 8 94 chr2 139130995 139131471 -114125112 + LTR8 LTR ERV1 150 584 -107 270 311 143 12 chr2 139131689 139131850 -114124733 - MIR3 SINE MIR -11 197 16 396 0 0 0 chr2 139132205 139132249 -114124334 + (TG)n Simple_repeat Simple_repeat 2 45 0 575 35 0 59 chr2 139133990 139134075 -114122508 + L1PA5 LINE L1 6069 6148 -6 243 0 0 0 chr2 139134078 139134105 -114122478 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2106 97 0 14 chr2 139134503 139134791 -114121792 + AluSq SINE Alu 1 284 -29 17377 22 2 0 chr2 139134909 139137816 -114118767 + L1HS LINE L1 3227 6139 -16 280 40 40 20 chr2 139137816 139137866 -114118717 + (TAAA)n Simple_repeat Simple_repeat 3 53 0 203 291 13 0 chr2 139138213 139138292 -114118291 + MIR3 SINE MIR 128 207 -1 22 0 0 0 chr2 139138571 139138593 -114117990 + AT_rich Low_complexity Low_complexity 1 22 0 1007 292 108 13 chr2 139139737 139140200 -114116383 - L2 LINE L2 -1 3312 2806 579 301 53 35 chr2 139140276 139140502 -114116081 + MIR SINE MIR 9 238 -24 238 266 32 21 chr2 139142661 139142755 -114113828 + HAL1b LINE L1 496 590 -758 2744 23 0 0 chr2 139143117 139143425 -114113158 - AluYa5 SINE Alu -3 308 1 506 310 107 30 chr2 139143490 139143727 -114112856 + L1ME4a LINE L1 5554 5830 -291 2860 16 0 6 chr2 139143727 139144047 -114112536 - AluYb8 SINE Alu 0 318 1 506 310 107 30 chr2 139144047 139144174 -114112409 + L1ME4a LINE L1 5830 5946 -175 270 273 39 13 chr2 139145731 139145808 -114110775 + L2 LINE L2 3193 3271 -1 3651 208 49 9 chr2 139145967 139146738 -114109845 - MER21B LTR ERV1 -19 844 43 288 235 0 15 chr2 139146742 139146810 -114109773 - MER21B LTR ERV1 -778 85 19 293 182 0 18 chr2 139146842 139146897 -114109686 - MER21B LTR ERV1 -795 68 15 483 240 55 75 chr2 139147381 139147581 -114109002 + MLT1J LTR MaLR 8 203 -308 308 188 45 62 chr2 139147709 139147821 -114108762 + MLT1J LTR MaLR 387 496 -15 348 212 136 25 chr2 139147950 139148068 -114108515 - MIR SINE MIR -50 212 82 186 310 56 70 chr2 139149120 139149262 -114107321 + L2 LINE L2 2798 2937 -377 843 201 24 0 chr2 139149389 139149553 -114107030 - MER5A DNA MER1_type -21 168 1 1434 272 192 21 chr2 139149646 139150907 -114105676 - L2 LINE L2 0 3313 1803 203 310 70 63 chr2 139150976 139151118 -114105465 + MER5A DNA MER1_type 3 145 -44 * 259 228 81 106 chr2 139151043 139151166 -114105417 - MER5A DNA MER1_type -63 126 7 694 214 55 22 chr2 139153945 139154127 -114102456 + MER5A DNA MER1_type 1 188 -1 2280 77 47 0 chr2 139155486 139155783 -114100800 + AluY SINE Alu 1 311 0 364 304 10 0 chr2 139155826 139155928 -114100655 + MER81 DNA DNA 12 114 0 194 245 20 0 chr2 139157545 139157594 -114098989 - MIR SINE MIR -114 148 99 251 227 171 80 chr2 139157757 139157823 -114098760 + MIR3 SINE MIR 81 158 -50 998 162 21 37 chr2 139157823 139158014 -114098569 - MER5A DNA MER1_type 0 189 2 251 227 171 80 chr2 139158014 139158035 -114098548 + MIR3 SINE MIR 158 176 -32 2129 110 41 0 chr2 139159755 139160047 -114096536 - AluSx SINE Alu -8 304 1 243 260 125 31 chr2 139160078 139160174 -114096409 - L2 LINE L2 -2 3270 3166 2270 106 0 10 chr2 139161213 139161525 -114095058 + AluSc SINE Alu 1 309 0 415 286 80 29 chr2 139161840 139162015 -114094568 + MER5A DNA MER1_type 4 187 -2 336 308 89 35 chr2 139162041 139162210 -114094373 + MER5B DNA MER1_type 1 178 0 605 182 54 7 chr2 139162900 139163048 -114093535 + MER20 DNA MER1_type 56 210 -9 31 26 0 0 chr2 139163758 139163796 -114092787 + AT_rich Low_complexity Low_complexity 1 38 0 1841 142 6 61 chr2 139165094 139165424 -114091159 - AluJb SINE Alu 0 312 1 29 60 0 0 chr2 139165437 139165487 -114091096 + AT_rich Low_complexity Low_complexity 1 50 0 1701 181 3 26 chr2 139165647 139165951 -114090632 + AluJo SINE Alu 1 297 -15 207 309 48 32 chr2 139165952 139166078 -114090505 - MIR SINE MIR -16 246 119 212 233 0 0 chr2 139166082 139166125 -114090458 + (TG)n Simple_repeat Simple_repeat 2 44 0 239 374 28 0 chr2 139167828 139167935 -114088648 - MIR SINE MIR -61 147 38 494 170 96 0 chr2 139168871 139168965 -114087618 + U6 snRNA snRNA 1 103 -4 882 265 0 0 chr2 139169136 139169332 -114087251 + MIR SINE MIR 13 208 -54 223 327 19 56 chr2 139169524 139169631 -114086952 - MIR3 SINE MIR -94 114 12 433 344 63 43 chr2 139170030 139170283 -114086300 - MIR SINE MIR 0 262 5 363 335 93 5 chr2 139171227 139171421 -114085162 - MIR SINE MIR -32 230 20 229 352 55 0 chr2 139171715 139171806 -114084777 + MIR SINE MIR 53 148 -60 183 287 83 46 chr2 139172218 139172326 -114084257 + MIR SINE MIR 21 132 -130 1807 161 6 45 chr2 139172519 139172872 -114083711 + MLT1B LTR MaLR 50 388 -2 2021 132 0 38 chr2 139173764 139174083 -114082500 + AluSx SINE Alu 1 307 -5 317 189 0 14 chr2 139176859 139176933 -114079650 - MER116 DNA Mariner -7 73 1 2174 61 0 4 chr2 139176982 139177243 -114079340 - AluY SINE Alu -17 294 35 395 243 19 10 chr2 139177309 139177412 -114079171 - MER5A DNA MER1_type -79 110 7 264 77 0 0 chr2 139178623 139178662 -114077921 + (TCCA)n Simple_repeat Simple_repeat 4 42 0 491 269 81 47 chr2 139178666 139178835 -114077748 - L2 LINE L2 -7 3306 3121 624 229 126 0 chr2 139178835 139179018 -114077565 + MER63A DNA MER1_type 1 206 -4 491 269 81 47 chr2 139179018 139179146 -114077437 - L2 LINE L2 -192 3121 2999 2075 138 7 7 chr2 139179164 139179462 -114077121 + AluSx SINE Alu 1 298 -14 1064 291 38 47 chr2 139179571 139180017 -114076566 - L2 LINE L2 -658 2656 2215 406 154 64 13 chr2 139180211 139180289 -114076294 + SVA Other Other 445 526 -860 411 288 25 2 chr2 139180516 139180640 -114075943 - MER5B DNA MER1_type 0 178 61 317 313 166 24 chr2 139180655 139181035 -114075548 - L2 LINE L2 -2327 987 554 338 330 8 0 chr2 139181061 139181179 -114075404 + L2 LINE L2 2490 2608 -706 354 343 128 48 chr2 139181185 139181582 -114075001 - L2 LINE L2 -2799 515 87 226 163 0 0 chr2 139182141 139182184 -114074399 + L1ME4a LINE L1 5955 5997 -124 2251 114 3 0 chr2 139182310 139182608 -114073975 + AluSp SINE Alu 1 299 -14 251 71 24 0 chr2 139182609 139182651 -114073932 + (TATAA)n Simple_repeat Simple_repeat 3 45 0 22 0 0 0 chr2 139183690 139183712 -114072871 + AT_rich Low_complexity Low_complexity 1 22 0 193 374 102 0 chr2 139184773 139184939 -114071644 + L2 LINE L2 2512 2694 -620 471 206 63 29 chr2 139184941 139185116 -114071467 - L1MD3 LINE L1 -3 7992 7812 1607 230 0 3 chr2 139185168 139185468 -114071115 + AluJo SINE Alu 1 299 -13 238 297 27 0 chr2 139185512 139185586 -114070997 + L2 LINE L2 2725 2800 -514 231 243 99 81 chr2 139185605 139185716 -114070867 - MER94 DNA DNA -19 115 3 278 364 38 59 chr2 139185731 139186204 -114070379 + L2 LINE L2 2808 3270 -2 307 274 102 118 chr2 139186328 139186583 -114070000 + MIR SINE MIR 12 262 0 768 290 101 22 chr2 139186693 139187425 -114069158 + L2 LINE L2 2366 3309 -4 3205 139 76 13 chr2 139188510 139189190 -114067393 + LTR1B LTR ERV1 1 793 -33 748 177 8 0 chr2 139189288 139189458 -114067125 - FLAM_A SINE Alu 0 171 1 1780 181 3 0 chr2 139190962 139191265 -114065318 - AluJb SINE Alu -8 304 1 295 331 55 0 chr2 139192085 139192212 -114064371 + L2 LINE L2 3180 3313 0 483 48 0 0 chr2 139192312 139192374 -114064209 + (CA)n Simple_repeat Simple_repeat 1 62 0 374 352 72 62 chr2 139192705 139193127 -114063456 + L2 LINE L2 2619 3047 -225 1414 192 14 27 chr2 139193332 139193624 -114062959 + AluJo SINE Alu 1 288 -24 212 319 137 48 chr2 139197527 139197775 -114058808 + L3 LINE CR1 185 454 -1123 2103 78 0 44 chr2 139197787 139198104 -114058479 - AluY SINE Alu 0 304 1 766 210 25 50 chr2 139198304 139198504 -114058079 + MER58A DNA MER1_type 30 224 0 252 143 0 0 chr2 139198790 139198832 -114057751 + (TGGA)n Simple_repeat Simple_repeat 1 42 0 190 329 55 14 chr2 139198857 139198930 -114057653 - MIR SINE MIR -23 239 164 671 289 60 4 chr2 139198991 139199098 -114057485 - MIR SINE MIR -3 259 159 305 61 0 41 chr2 139199098 139199147 -114057436 + (CAT)n Simple_repeat Simple_repeat 2 48 0 671 289 60 4 chr2 139199147 139199271 -114057312 - MIR SINE MIR -103 159 15 433 234 16 0 chr2 139199402 139199530 -114057053 - L1MD3 LINE L1 0 7995 7866 840 233 24 24 chr2 139199541 139199790 -114056793 - L1MC4a LINE L1 -245 7563 7315 1912 157 13 3 chr2 139199790 139200089 -114056494 - AluJb SINE Alu -10 302 1 207 69 0 0 chr2 139200148 139200177 -114056406 + (CA)n Simple_repeat Simple_repeat 2 30 0 180 0 0 0 chr2 139200563 139200583 -114056000 + (CA)n Simple_repeat Simple_repeat 2 21 0 2095 135 3 0 chr2 139201343 139201640 -114054943 - AluSx SINE Alu -14 298 1 314 291 121 18 chr2 139201830 139202053 -114054530 + L1ME4a LINE L1 5540 5785 -336 195 42 0 0 chr2 139202520 139202544 -114054039 + (TTG)n Simple_repeat Simple_repeat 2 25 0 277 295 32 26 chr2 139202559 139202620 -114053963 + Tigger8 DNA MER2_type 276 335 -331 867 231 52 75 chr2 139202620 139202966 -114053617 - MER46C DNA MER2_type 0 338 1 277 295 32 26 chr2 139202966 139203094 -114053489 + Tigger8 DNA MER2_type 335 466 -200 388 256 22 22 chr2 139203377 139203514 -114053069 + L1ME4a LINE L1 5982 6118 -3 262 374 16 16 chr2 139203564 139203687 -114052896 - MIR3 SINE MIR -82 126 4 23 54 0 0 chr2 139205739 139205776 -114050807 + AT_rich Low_complexity Low_complexity 1 37 0 263 164 0 55 chr2 139206599 139206654 -114049929 + L2 LINE L2 3261 3312 -1 1987 136 4 0 chr2 139208118 139208397 -114048186 - AluSx SINE Alu -32 280 1 1957 241 11 23 chr2 139208397 139209010 -114047573 + L1MC1 LINE L1 4433 5038 -1108 3130 136 70 3 chr2 139209030 139209620 -114046963 + L1MC1 LINE L1 5626 6254 -79 699 121 57 8 chr2 139209663 139209787 -114046796 + L1MC1 LINE L1 6203 6332 -1 2944 108 0 2 chr2 139210468 139210894 -114045689 - L1PA12 LINE L1 0 6168 5744 451 389 93 20 chr2 139211364 139211804 -114044779 + L2 LINE L2 2401 2872 -442 296 231 11 0 chr2 139213207 139213298 -114043285 - MER113 DNA MER1_type? -424 97 6 433 207 0 124 chr2 139214610 139214755 -114041828 + L2 LINE L2 3186 3312 -1 430 291 26 0 chr2 139215739 139215856 -114040727 + MER5A DNA MER1_type 68 187 -2 429 293 64 37 chr2 139216209 139216397 -114040186 - MER117 DNA MER1_type -3 194 2 346 282 76 23 chr2 139216592 139216723 -114039860 - MIR3 SINE MIR -6 202 65 614 296 96 90 chr2 139217022 139217989 -114038594 + L2 LINE L2 2311 3271 -1 42671 57 8 1 chr2 139218111 139224223 -114032360 - L1PA5 LINE L1 -6 6148 2 276 222 79 0 chr2 139225695 139225758 -114030825 - MER5B DNA MER1_type -1 177 110 456 281 16 8 chr2 139225789 139225910 -114030673 + MER5B DNA MER1_type 57 178 0 184 340 0 0 chr2 139225992 139226039 -114030544 - L2 LINE L2 -18 3295 3249 317 312 201 47 chr2 139226091 139226200 -114030383 + L2 LINE L2 2136 2227 -1087 931 119 0 179 chr2 139226200 139226435 -114030148 - 7SK RNA RNA 0 193 1 317 312 201 47 chr2 139226435 139226921 -114029662 + L2 LINE L2 2227 2823 -491 1970 186 9 14 chr2 139227151 139227501 -114029082 + MER7A DNA MER2_type 1 346 0 299 300 24 106 chr2 139227523 139227693 -114028890 + L2 LINE L2 3117 3272 0 220 288 82 0 chr2 139230006 139230079 -114026504 + MIR SINE MIR 183 261 -1 1859 155 7 7 chr2 139230693 139230983 -114025600 - AluJo SINE Alu -22 290 1 280 111 0 0 chr2 139231556 139231592 -114024991 - MLT1C LTR MaLR 0 467 432 * 1370 158 75 16 chr2 139231587 139231840 -114024743 - MLT1C LTR MaLR -199 268 1 193 303 34 34 chr2 139231885 139231974 -114024609 + MIR SINE MIR 1 89 -173 267 260 180 0 chr2 139232665 139232765 -114023818 + MER91B DNA MER1_type 3 120 -70 232 299 30 0 chr2 139232803 139232870 -114023713 + MER91A DNA MER1_type 128 196 0 1036 101 0 0 chr2 139233341 139233479 -114023104 + L1PA8 LINE L1 6031 6168 -4 1034 226 63 84 chr2 139235299 139235776 -114020807 + MLT1C LTR MaLR 1 467 0 2155 220 96 96 chr2 139235857 139236667 -114019916 + MER21B LTR ERV1 1 810 -53 2595 157 36 7 chr2 139237520 139237934 -114018649 + MSTB LTR MaLR 1 426 0 261 0 0 0 chr2 139238923 139238952 -114017631 + (TG)n Simple_repeat Simple_repeat 2 30 0 1742 154 39 39 chr2 139239350 139239688 -114016895 - MER44D DNA MER2_type -1 608 1 259 330 50 45 chr2 139239903 139240082 -114016501 + L2 LINE L2 2644 2823 -491 3383 202 15 3 chr2 139240096 139240710 -114015873 + MER82 DNA MER2_type 10 630 -23 530 275 23 0 chr2 139240716 139240847 -114015736 + L2 LINE L2 2830 2963 -351 289 219 31 0 chr2 139240874 139240938 -114015645 + L2 LINE L2 3245 3310 -3 220 385 43 8 chr2 139243049 139243166 -114013417 - MIR3 SINE MIR -48 160 40 242 266 94 31 chr2 139243949 139244077 -114012506 + MLT1H LTR MaLR 406 541 -8 253 333 0 0 chr2 139244721 139244808 -114011775 + Charlie4 DNA MER1_type 1869 1955 -6 355 266 39 65 chr2 139245445 139245599 -114010984 + MIR SINE MIR 103 252 -10 830 217 69 0 chr2 139245635 139245810 -114010773 + MER5A DNA MER1_type 3 189 0 441 219 32 84 chr2 139245824 139245979 -114010604 + MER5B DNA MER1_type 7 153 -25 333 232 10 61 chr2 139246074 139246173 -114010410 + MIR SINE MIR 60 153 -109 195 283 80 26 chr2 139246163 139246276 -114010307 - MIR3 SINE MIR -34 174 56 * 1710 193 42 8 chr2 139247100 139247453 -114009130 + MLT1A1 LTR MaLR 1 365 0 856 178 33 0 chr2 139248479 139248631 -114007952 + L1MD2 LINE L1 6181 6337 -22 785 213 33 96 chr2 139248644 139248916 -114007667 + MER102a DNA MER1_type 66 320 -10 305 300 58 17 chr2 139251165 139251285 -114005298 - L2 LINE L2 -2 3311 3187 802 326 70 22 chr2 139252703 139253117 -114003466 + L3b LINE CR1 1129 1562 -21 278 341 91 23 chr2 139253293 139253469 -114003114 + MIR SINE MIR 49 236 -26 418 200 150 21 chr2 139253957 139254097 -114002486 + L1MC4a LINE L1 1574 1731 -4665 208 371 57 31 chr2 139254207 139254366 -114002217 - MIR3 SINE MIR -14 194 32 269 350 34 34 chr2 139254386 139254503 -114002080 + Charlie8 DNA MER1_type 2 118 -2299 1906 200 97 23 chr2 139255165 139255650 -114000933 + L1MB8 LINE L1 5653 6173 -5 379 296 66 28 chr2 139255697 139255910 -114000673 - MIR SINE MIR -6 256 36 340 261 54 0 chr2 139259302 139259394 -113997189 + MER81 DNA DNA 16 112 -2 329 272 218 27 chr2 139259705 139259852 -113996731 + MER5A DNA MER1_type 9 183 -6 224 306 61 0 chr2 139260303 139260401 -113996182 - L2 LINE L2 -947 2367 2264 258 245 117 20 chr2 139260960 139261025 -113995558 + L1MC4a LINE L1 2910 2967 -3248 2256 103 0 0 chr2 139261025 139261315 -113995268 + AluSg SINE Alu 1 290 -20 258 245 117 20 chr2 139261315 139261445 -113995138 + L1MC4a LINE L1 2967 3124 -3091 1059 206 32 40 chr2 139261459 139261711 -113994872 + L1MEc LINE L1 3651 3900 -2315 1024 126 66 30 chr2 139261730 139261928 -113994655 + L1MC3 LINE L1 7578 7782 -3 180 241 181 65 chr2 139261934 139262133 -113994450 - L2 LINE L2 -148 3165 2944 277 243 20 47 chr2 139262135 139262283 -113994300 + L1MC4a LINE L1 3230 3373 -2842 358 312 111 74 chr2 139262452 139263317 -113993266 + L1MC4a LINE L1 3591 4896 -1319 23 68 0 0 chr2 139263343 139263387 -113993196 + AT_rich Low_complexity Low_complexity 1 44 0 675 330 102 6 chr2 139263748 139264275 -113992308 + L1MC4a LINE L1 5379 5956 -1921 5109 150 9 78 chr2 139264329 139265794 -113990789 - L1PA16 LINE L1 -1 6165 4765 237 211 0 0 chr2 139266016 139266073 -113990510 + GA-rich Low_complexity Low_complexity 1 57 0 379 315 8 46 chr2 139267694 139267824 -113988759 + L2 LINE L2 3144 3268 -4 385 242 50 0 chr2 139267961 139268081 -113988502 - L1ME LINE L1 -439 5682 5557 888 246 35 26 chr2 139269446 139269678 -113986905 + MIR SINE MIR 3 236 -26 289 268 14 14 chr2 139269728 139269799 -113986784 + L2 LINE L2 3199 3269 -3 278 182 0 0 chr2 139270741 139270796 -113985787 + MER3 DNA MER1_type 150 204 -5 232 390 66 11 chr2 139270942 139271216 -113985367 + L2 LINE L2 2325 2613 -701 484 296 13 26 chr2 139271237 139271389 -113985194 - MER5B DNA MER1_type 0 178 29 193 264 101 62 chr2 139271583 139271761 -113984822 + L2 LINE L2 2872 3056 -216 184 258 65 0 chr2 139271995 139272057 -113984526 + L2 LINE L2 3197 3262 -51 2301 105 0 0 chr2 139272108 139272412 -113984171 + AluY SINE Alu 2 305 -6 603 328 50 8 chr2 139272714 139272952 -113983631 + MIR SINE MIR 15 262 0 2457 78 0 0 chr2 139275464 139275771 -113980812 + AluY SINE Alu 1 307 -4 222 200 55 18 chr2 139275873 139275928 -113980655 + MIR SINE MIR 174 230 -32 321 47 0 0 chr2 139276115 139276158 -113980425 + (CA)n Simple_repeat Simple_repeat 2 44 0 513 0 0 0 chr2 139279389 139279446 -113977137 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 690 278 40 16 chr2 139281405 139281657 -113974926 - MIR SINE MIR -3 259 2 220 319 14 0 chr2 139281832 139281901 -113974682 + GA-rich Low_complexity Low_complexity 1 70 0 185 287 0 11 chr2 139282426 139282513 -113974070 + CT-rich Low_complexity Low_complexity 1 86 0 * 745 110 16 44 chr2 139282492 139282674 -113973909 + (TTCCC)n Simple_repeat Simple_repeat 1 177 0 852 139 31 0 chr2 139282692 139282821 -113973762 - FLAM_C SINE Alu 0 133 1 1561 165 12 0 chr2 139283677 139283926 -113972657 - AluJb SINE Alu -11 301 50 183 345 172 35 chr2 139284147 139284263 -113972320 + L2 LINE L2 3141 3272 0 934 294 142 77 chr2 139284939 139285959 -113970624 - L3 LINE CR1 -71 1506 420 471 156 62 8 chr2 139286030 139286151 -113970432 + MLT1C LTR MaLR 22 154 -313 353 340 45 0 chr2 139288461 139288749 -113967834 + L1ME4a LINE L1 5618 5918 -203 183 129 0 0 chr2 139288757 139288788 -113967795 + (GGAA)n Simple_repeat Simple_repeat 1 31 0 22 0 0 0 chr2 139289246 139289268 -113967315 + AT_rich Low_complexity Low_complexity 1 22 0 34 24 0 0 chr2 139290016 139290057 -113966526 + AT_rich Low_complexity Low_complexity 1 41 0 426 284 88 72 chr2 139291173 139291673 -113964910 + MLT1J LTR MaLR 1 508 -3 618 164 58 0 chr2 139294263 139294367 -113962216 - FLAM_C SINE Alu -25 118 9 23 0 0 0 chr2 139295541 139295564 -113961019 + AT_rich Low_complexity Low_complexity 1 23 0 308 315 0 0 chr2 139296709 139296798 -113959785 - MLT1J1 LTR MaLR -299 147 59 238 297 76 0 chr2 139296906 139297024 -113959559 - L1MEd LINE L1 -5313 806 680 212 253 0 80 chr2 139297698 139297773 -113958810 + MIR SINE MIR 124 192 -70 569 128 0 0 chr2 139299268 139299354 -113957229 - Tigger7 DNA MER2_type -301 432 347 235 267 50 17 chr2 139299372 139299432 -113957151 + L2 LINE L2 3211 3272 0 2104 96 4 4 chr2 139299442 139299751 -113956832 + AluY SINE Alu 1 309 0 263 222 157 37 chr2 139299923 139300031 -113956552 + MIR SINE MIR 109 229 -33 40409 39 22 1 chr2 139300041 139306070 -113950513 - L1PA2 LINE L1 0 6155 1 185 0 0 39 chr2 139306093 139306119 -113950464 + (CAT)n Simple_repeat Simple_repeat 2 26 0 292 309 96 43 chr2 139307786 139308016 -113948567 + L2 LINE L2 2404 2645 -669 2376 68 0 3 chr2 139308082 139308375 -113948208 + AluSc SINE Alu 1 292 -17 908 167 0 78 chr2 139308406 139308610 -113947973 - MER5A DNA MER1_type -1 188 1 3427 125 38 29 chr2 139308960 139309143 -113947440 + L1MA8 LINE L1 5609 5789 -502 387 0 0 0 chr2 139309143 139309186 -113947397 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 300 111 0 0 chr2 139309186 139309231 -113947352 + (CA)n Simple_repeat Simple_repeat 2 46 0 3427 125 38 29 chr2 139309231 139309702 -113946881 + L1MA8 LINE L1 5788 6270 -21 456 246 16 91 chr2 139309782 139309831 -113946752 - Charlie8 DNA MER1_type -163 178 127 2245 120 0 0 chr2 139309831 139310139 -113946444 - AluSg SINE Alu -2 308 1 456 246 16 91 chr2 139310139 139310276 -113946307 - Charlie8 DNA MER1_type -214 127 6 2111 214 36 17 chr2 139312503 139313035 -113943548 - MER44D DNA MER2_type -8 597 1 216 270 25 110 chr2 139313430 139313593 -113942990 + MIR SINE MIR 47 195 -67 424 259 118 18 chr2 139313878 139314048 -113942535 - Charlie8 DNA MER1_type -2154 263 77 271 324 101 64 chr2 139314275 139314494 -113942089 - MIR SINE MIR -26 236 10 1066 111 17 6 chr2 139314503 139314675 -113941908 + L1MA4A LINE L1 6124 6297 -6 2260 129 0 0 chr2 139314951 139315262 -113941321 - AluSx SINE Alu -1 311 1 317 317 7 21 chr2 139315672 139315814 -113940769 + LTR16C LTR ERVL 300 439 -52 3001 170 31 43 chr2 139316367 139316481 -113940102 - L1MA4A LINE L1 -24 6279 6165 3190 57 17 2 chr2 139316481 139316899 -113939684 - L1PA13 LINE L1 -19 6144 5721 3001 170 31 43 chr2 139316899 139317242 -113939341 - L1MA4A LINE L1 -138 6165 5819 1769 171 26 3 chr2 139317242 139317547 -113939036 - AluSx SINE Alu 0 312 1 3001 170 31 43 chr2 139317547 139317859 -113938724 - L1MA4A LINE L1 -484 5819 5471 210 173 40 0 chr2 139318105 139318180 -113938403 + (TCTA)n Simple_repeat Simple_repeat 1 78 0 408 275 125 31 chr2 139318772 139318932 -113937651 + MER5B DNA MER1_type 1 175 -3 237 355 28 19 chr2 139319274 139319381 -113937202 - L3b LINE CR1 -9 1574 1467 1832 132 102 24 chr2 139319568 139319901 -113936682 + MER46B DNA MER2_type 1 234 -2 370 336 25 0 chr2 139319930 139320052 -113936531 + MIR3 SINE MIR 31 155 -53 189 362 52 26 chr2 139322394 139322510 -113934073 + MIR3 SINE MIR 2 120 -88 1566 142 8 23 chr2 139323615 139323709 -113932874 + AluJo SINE Alu 34 128 -184 1808 119 28 0 chr2 139323709 139323961 -113932622 + AluSc SINE Alu 38 296 -13 1566 142 8 23 chr2 139323961 139324126 -113932457 + AluJo SINE Alu 128 289 -23 398 290 156 41 chr2 139326160 139326429 -113930154 - L2 LINE L2 0 3313 3014 234 0 0 0 chr2 139327175 139327201 -113929382 + (TG)n Simple_repeat Simple_repeat 2 27 0 232 253 91 30 chr2 139327315 139327414 -113929169 + MIR SINE MIR 115 219 -43 185 275 25 62 chr2 139327428 139327508 -113929075 + L2 LINE L2 3152 3228 -44 422 273 26 22 chr2 139327555 139327702 -113928881 + MIR SINE MIR 30 176 -63 394 280 86 0 chr2 139328516 139328609 -113927974 + L2 LINE L2 3197 3297 -16 4979 151 66 5 chr2 139329529 139330378 -113926205 + MER4D LTR ERV1 1 901 -2 924 199 38 32 chr2 139331601 139331787 -113924796 + MER5A DNA MER1_type 3 189 0 548 180 11 17 chr2 139333414 139333592 -113922991 + GA-rich Low_complexity Low_complexity 3 179 0 227 266 31 0 chr2 139333676 139333740 -113922843 + GA-rich Low_complexity Low_complexity 2 67 0 2415 91 0 0 chr2 139334579 139334887 -113921696 - AluSg SINE Alu -2 308 1 21 0 0 0 chr2 139335680 139335701 -113920882 + AT_rich Low_complexity Low_complexity 1 21 0 249 322 74 54 chr2 139336067 139336216 -113920367 - MIR3 SINE MIR -2 206 55 321 363 68 14 chr2 139336240 139336386 -113920197 - L2 LINE L2 -4 3268 3115 225 65 0 0 chr2 139337854 139337885 -113918698 + (TGAA)n Simple_repeat Simple_repeat 4 34 0 264 195 65 39 chr2 139338430 139338507 -113918076 - MIR SINE MIR -72 136 58 510 291 23 55 chr2 139340533 139340753 -113915830 - MIR SINE MIR -29 233 21 193 278 0 0 chr2 139341019 139341073 -113915510 - MIR SINE MIR -131 131 78 628 290 75 8 chr2 139341405 139341857 -113914726 + LTR33 LTR ERVL 1 513 -8 231 274 26 53 chr2 139344172 139344285 -113912298 - Charlie4 DNA MER1_type -8 1953 1844 251 236 258 0 chr2 139344573 139344662 -113911921 - L2 LINE L2 0 3272 3161 1103 184 19 5 chr2 139344665 139344871 -113911712 + MER20 DNA MER1_type 11 219 0 186 133 0 0 chr2 139345417 139345447 -113911136 + (CA)n Simple_repeat Simple_repeat 2 31 0 737 269 36 27 chr2 139345776 139346040 -113910543 + MIR SINE MIR 5 262 0 641 250 53 27 chr2 139347463 139347651 -113908932 + MER58A DNA MER1_type 32 224 0 1197 244 130 86 chr2 139348068 139348567 -113908016 - LTR33 LTR ERVL 0 521 1 233 243 204 10 chr2 139349852 139349955 -113906628 + MIR3 SINE MIR 78 200 -8 201 143 0 29 chr2 139350825 139350860 -113905723 + (CCCTG)n Simple_repeat Simple_repeat 2 35 0 243 161 0 0 chr2 139351272 139351328 -113905255 + (CA)n Simple_repeat Simple_repeat 2 57 0 227 293 27 13 chr2 139351663 139351738 -113904845 - L2 LINE L2 -11 3302 3227 27 29 0 0 chr2 139353068 139353102 -113903481 + AT_rich Low_complexity Low_complexity 1 34 0 2615 65 0 0 chr2 139353372 139353682 -113902901 - AluY SINE Alu -1 310 1 343 293 0 20 chr2 139353683 139353782 -113902801 + MIR SINE MIR 57 153 -109 371 307 87 16 chr2 139355421 139355548 -113901035 - L2 LINE L2 -60 3253 3118 2286 87 0 29 chr2 139355581 139355893 -113900690 + AluSc SINE Alu 1 303 -6 361 321 38 38 chr2 139356033 139356245 -113900338 + MIR SINE MIR 47 258 -4 2038 186 37 5 chr2 139357130 139357506 -113899077 - MLT1B LTR MaLR -2 388 1 322 271 43 14 chr2 139357930 139358070 -113898513 + LTR33A LTR ERVL 377 520 -3 345 123 0 0 chr2 139358962 139359027 -113897556 + (CA)n Simple_repeat Simple_repeat 1 65 0 198 365 42 31 chr2 139359383 139359479 -113897104 + L2 LINE L2 3199 3295 -18 464 195 80 35 chr2 139359553 139359666 -113896917 + MER5B DNA MER1_type 5 122 -56 529 245 126 25 chr2 139359704 139359863 -113896720 + MER5B DNA MER1_type 1 175 -3 296 267 8 0 chr2 139360538 139360669 -113895914 + (TG)n Simple_repeat Simple_repeat 2 133 0 359 132 73 0 chr2 139361289 139361357 -113895226 - L1MB7 LINE L1 -3 6181 6109 501 292 37 6 chr2 139361500 139361661 -113894922 + MIR SINE MIR 23 188 -74 246 230 0 81 chr2 139361721 139361795 -113894788 - L2 LINE L2 -1 3312 3245 1112 118 0 6 chr2 139361840 139362018 -113894565 + (GGAA)n Simple_repeat Simple_repeat 4 180 0 25 31 0 0 chr2 139362510 139362542 -113894041 + AT_rich Low_complexity Low_complexity 1 32 0 1849 179 10 3 chr2 139363457 139363765 -113892818 + AluJb SINE Alu 1 310 -2 284 233 0 11 chr2 139363835 139363925 -113892658 + (TA)n Simple_repeat Simple_repeat 2 90 0 443 241 292 0 chr2 139364089 139364226 -113892357 - MER5A DNA MER1_type 0 189 13 340 336 70 14 chr2 139364420 139364767 -113891816 - L3 LINE CR1 -2 1575 1140 355 265 150 42 chr2 139365092 139365701 -113890882 - L1MC/D LINE L1 -743 5403 5127 684 282 28 21 chr2 139365949 139366233 -113890350 - L1MC/D LINE L1 -1344 4802 4517 1063 248 108 52 chr2 139366239 139366755 -113889828 + MLT1H LTR MaLR 2 546 -3 242 180 16 0 chr2 139366813 139366874 -113889709 + GA-rich Low_complexity Low_complexity 3 64 0 258 202 32 11 chr2 139366895 139366989 -113889594 + (TTAA)n Simple_repeat Simple_repeat 3 98 0 343 302 89 47 chr2 139367777 139368158 -113888425 - L1ME4a LINE L1 -215 5906 5510 626 210 6 62 chr2 139368413 139368575 -113888008 - MER106A DNA MER1_type -54 182 30 631 286 64 17 chr2 139368803 139369037 -113887546 - MER102a DNA MER1_type 0 330 86 25 0 0 0 chr2 139369415 139369440 -113887143 + AT_rich Low_complexity Low_complexity 1 25 0 240 358 49 8 chr2 139369820 139369943 -113886640 + MIR3 SINE MIR 71 198 -10 4023 180 36 27 chr2 139369997 139370810 -113885773 - L1MB7 LINE L1 -11 6173 5354 5101 155 23 19 chr2 139370827 139372273 -113884310 - L1PB4 LINE L1 -14 6142 4696 3512 218 40 35 chr2 139372258 139373279 -113883304 - L1MB7 LINE L1 -778 5368 4343 * 2670 49 0 0 chr2 139374607 139374915 -113881668 - AluY SINE Alu -3 308 1 216 261 34 25 chr2 139375086 139375205 -113881378 + A-rich Low_complexity Low_complexity 6 125 0 460 326 119 33 chr2 139375225 139375562 -113881021 + L1MEd LINE L1 938 1303 -4902 2240 112 0 3 chr2 139375574 139375879 -113880704 + AluY SINE Alu 1 304 -7 292 282 104 66 chr2 139376042 139376283 -113880300 + L1MEd LINE L1 1542 1846 -730 2137 136 7 0 chr2 139376329 139376639 -113879944 + AluSx SINE Alu 1 312 0 26 64 0 0 chr2 139376732 139376779 -113879804 + AT_rich Low_complexity Low_complexity 1 47 0 23 78 0 0 chr2 139376935 139376986 -113879597 + AT_rich Low_complexity Low_complexity 1 51 0 330 257 55 18 chr2 139377476 139377585 -113878998 - LTR67 LTR ERVL -91 466 354 572 276 50 28 chr2 139377700 139377881 -113878702 - LTR67 LTR ERVL -370 187 3 399 221 31 71 chr2 139377956 139378083 -113878500 - L1ME4a LINE L1 -273 5848 5727 243 269 15 15 chr2 139378545 139378612 -113877971 + MIR SINE MIR 104 170 -92 311 246 70 53 chr2 139378614 139378679 -113877904 + MIR SINE MIR 144 213 -49 2778 161 14 2 chr2 139378679 139379100 -113877483 + MSTB LTR MaLR 1 426 0 311 246 70 53 chr2 139379100 139379148 -113877435 + MIR SINE MIR 213 259 -3 409 303 35 73 chr2 139380064 139380404 -113876179 - L1MC4a LINE L1 -162 5959 5630 297 0 61 20 chr2 139382335 139382384 -113874199 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 24165 36 23 1 chr2 139382541 139388431 -113868152 + L1PA2 LINE L1 2 6155 0 1385 190 197 42 chr2 139389488 139390067 -113866516 - MLT1E1 LTR MaLR 0 624 1 230 333 23 0 chr2 139391235 139391322 -113865261 - L3 LINE CR1 -195 1382 1294 2180 230 70 28 chr2 139391331 139391949 -113864634 + L1ME3A LINE L1 5525 6168 -2 210 342 17 43 chr2 139391952 139392069 -113864514 - L3 LINE CR1 -353 1224 1111 243 266 13 25 chr2 139393630 139393709 -113862874 - MIR3 SINE MIR -8 200 123 223 308 15 23 chr2 139393974 139394107 -113862476 + GA-rich Low_complexity Low_complexity 1 132 0 198 0 0 0 chr2 139394376 139394398 -113862185 + (A)n Simple_repeat Simple_repeat 1 22 0 523 293 54 12 chr2 139394833 139395000 -113861583 + MIR SINE MIR 81 254 -8 1355 178 23 23 chr2 139395032 139395290 -113861293 - AluJo SINE Alu -54 258 1 322 241 103 0 chr2 139395306 139395393 -113861190 - MIR SINE MIR -65 143 48 621 294 10 10 chr2 139395930 139396124 -113860459 - L2 LINE L2 0 3313 3120 327 224 147 18 chr2 139397534 139397704 -113858879 + HAL1 LINE L1 2011 2202 -305 198 143 0 0 chr2 139397876 139397911 -113858672 + (CATATA)n Simple_repeat Simple_repeat 2 36 0 2338 98 10 0 chr2 139398960 139399266 -113857317 + AluSc SINE Alu 1 309 0 513 270 165 10 chr2 139399502 139399523 -113857060 + MIR SINE MIR 16 32 -230 2185 135 0 0 chr2 139399523 139399819 -113856764 + AluSq SINE Alu 1 296 -17 513 270 165 10 chr2 139399819 139399997 -113856586 + MIR SINE MIR 32 246 -16 195 206 0 0 chr2 139400072 139400106 -113856477 - MIR SINE MIR -12 250 217 244 284 18 55 chr2 139400866 139400975 -113855608 + MER5A DNA MER1_type 18 122 -67 * 357 280 20 20 chr2 139400888 139400988 -113855595 - MER5A DNA MER1_type -24 165 66 814 303 15 15 chr2 139400996 139401257 -113855326 - MIR SINE MIR 0 262 2 199 277 85 32 chr2 139401400 139401494 -113855089 - L2 LINE L2 -2059 1255 1157 391 265 30 38 chr2 139402310 139402442 -113854141 + MIR3 SINE MIR 14 144 -64 387 0 0 0 chr2 139403329 139403372 -113853211 + (TG)n Simple_repeat Simple_repeat 2 44 0 438 267 89 17 chr2 139405547 139405727 -113850856 + L1MC/D LINE L1 5568 5760 -2048 242 246 116 0 chr2 139406040 139406109 -113850474 + L2 LINE L2 3237 3313 0 713 93 0 28 chr2 139407572 139407679 -113848904 + AluSp/q SINE Alu 209 312 -1 426 241 0 89 chr2 139407679 139407837 -113848746 - MIR SINE MIR -91 171 28 204 125 0 0 chr2 139410262 139410294 -113846289 + (T)n Simple_repeat Simple_repeat 1 32 0 1672 55 13 51 chr2 139413186 139413422 -113843161 - L1PA4 LINE L1 0 6155 5929 235 254 149 0 chr2 139413627 139413694 -113842889 - MER81 DNA DNA -37 77 1 491 288 105 54 chr2 139414111 139414462 -113842121 + LTR16A LTR ERVL 78 446 -4 935 238 14 9 chr2 139414726 139414949 -113841634 - MIR SINE MIR -10 252 29 21 0 0 0 chr2 139415945 139415966 -113840617 + AT_rich Low_complexity Low_complexity 1 21 0 946 218 28 0 chr2 139417833 139418012 -113838571 + MER5A DNA MER1_type 1 184 -5 292 310 0 10 chr2 139418628 139418728 -113837855 + L1ME LINE L1 5486 5584 -537 1008 99 14 146 chr2 139418807 139419020 -113837563 + MSTB LTR MaLR 1 185 -241 35666 33 0 0 chr2 139419120 139423996 -113832587 - L1PA3 LINE L1 -155 6000 1126 741 144 8 0 chr2 139423993 139424118 -113832465 - L1PBa LINE L1 -6113 750 625 * 1056 170 16 0 chr2 139424111 139424305 -113832278 - L1PBa LINE L1 -6664 199 3 212 120 0 60 chr2 139426992 139427042 -113829541 + (TGGGGG)n Simple_repeat Simple_repeat 5 51 0 200 298 18 18 chr2 139427765 139427822 -113828761 + L3 LINE CR1 104 160 -1417 320 276 155 9 chr2 139428941 139429057 -113827526 - L2 LINE L2 -1 3271 3139 195 326 77 39 chr2 139429385 139429566 -113827017 - L2 LINE L2 -480 2834 2647 21 0 0 0 chr2 139430652 139430673 -113825910 + AT_rich Low_complexity Low_complexity 1 21 0 263 282 31 40 chr2 139431576 139431712 -113824871 + MER5A DNA MER1_type 1 189 0 453 254 164 21 chr2 139433489 139433678 -113822905 - MIR SINE MIR -36 226 11 2229 117 0 0 chr2 139433778 139434076 -113822507 + AluSx SINE Alu 1 298 -14 2176 96 17 3 chr2 139434447 139434748 -113821835 + AluSp SINE Alu 1 305 -8 2189 129 6 0 chr2 139434760 139435071 -113821512 + AluSp SINE Alu 1 313 0 753 234 114 10 chr2 139435512 139435713 -113820870 + MER58A DNA MER1_type 1 222 -2 290 348 114 25 chr2 139436176 139436492 -113820091 + L2 LINE L2 2603 2946 -368 257 0 30 0 chr2 139436525 139436558 -113820025 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 2082 108 0 11 chr2 139436558 139436837 -113819746 - AluSx SINE Alu -36 276 1 366 241 0 0 chr2 139436861 139436940 -113819643 + L2 LINE L2 3194 3272 0 212 256 0 0 chr2 139437907 139437950 -113818633 + polypyrimidine Low_complexity Low_complexity 2 44 0 181 143 0 29 chr2 139438725 139438760 -113817823 + L2 LINE L2 3224 3257 -15 298 255 62 35 chr2 139438923 139439068 -113817515 - MER117 DNA MER1_type -47 150 2 * 1687 179 68 75 chr2 139439067 139439535 -113817048 + MLT1C LTR MaLR 3 467 0 941 265 9 0 chr2 139440047 139440262 -113816321 - MIR SINE MIR -32 230 14 2374 86 0 16 chr2 139440581 139440895 -113815688 - AluY SINE Alu -2 309 1 694 213 110 0 chr2 139440915 139441079 -113815504 - MER5A DNA MER1_type 0 189 8 206 404 46 0 chr2 139441379 139441488 -113815095 + L3b LINE CR1 1465 1578 -5 238 316 168 42 chr2 139441544 139441902 -113814681 + L2 LINE L2 2303 2705 -609 393 200 20 100 chr2 139441903 139441955 -113814628 + MER58B DNA MER1_type 1 43 -2377 1038 114 0 182 chr2 139441955 139442191 -113814392 - 7SK RNA RNA 0 193 1 393 200 20 100 chr2 139442191 139442238 -113814345 + MER58B DNA MER1_type 43 92 -2328 389 157 133 0 chr2 139442253 139442336 -113814247 - L1MA2 LINE L1 0 6304 6211 1248 202 32 0 chr2 139442357 139442610 -113813973 + MER58B DNA MER1_type 77 337 -4 410 178 34 14 chr2 139442812 139442958 -113813625 + GA-rich Low_complexity Low_complexity 3 151 0 186 103 0 0 chr2 139443030 139443059 -113813524 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 223 313 137 57 chr2 139443124 139443351 -113813232 + L2 LINE L2 2952 3196 -76 189 0 0 0 chr2 139443378 139443399 -113813184 + (TGAA)n Simple_repeat Simple_repeat 2 22 0 238 356 96 11 chr2 139443738 139443915 -113812668 - L2 LINE L2 -6 3266 3075 215 140 20 0 chr2 139443939 139443989 -113812594 + GA-rich Low_complexity Low_complexity 2 52 0 465 199 104 13 chr2 139444484 139444619 -113811964 + L1MA2 LINE L1 6157 6304 0 21 0 0 0 chr2 139444750 139444771 -113811812 + AT_rich Low_complexity Low_complexity 1 21 0 235 253 11 81 chr2 139446034 139446121 -113810462 + L1MC/D LINE L1 5704 5784 -2024 225 0 0 0 chr2 139446202 139446227 -113810356 + (TG)n Simple_repeat Simple_repeat 2 26 0 234 0 0 0 chr2 139446633 139446659 -113809924 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 285 196 41 21 chr2 139447226 139447323 -113809260 + (CA)n Simple_repeat Simple_repeat 2 100 0 216 111 0 0 chr2 139447359 139447395 -113809188 + (CA)n Simple_repeat Simple_repeat 1 36 0 2118 67 26 106 chr2 139447737 139448078 -113808505 - AluYb8 SINE Alu -4 314 1 277 157 20 0 chr2 139448477 139448528 -113808055 + L2 LINE L2 3262 3313 0 1972 295 74 21 chr2 139448643 139449753 -113806830 + L2 LINE L2 2135 3306 -7 752 181 4 4 chr2 139449779 139450027 -113806556 + GA-rich Low_complexity Low_complexity 1 248 0 401 217 53 118 chr2 139450100 139450363 -113806220 + MER112 DNA MER1_type 8 253 -7 240 224 399 14 chr2 139450945 139451088 -113805495 - MIR SINE MIR -30 232 35 396 0 0 0 chr2 139451491 139451535 -113805048 + (TG)n Simple_repeat Simple_repeat 1 44 0 202 234 21 0 chr2 139452381 139452428 -113804155 + L3b LINE CR1 1421 1468 -115 642 269 76 31 chr2 139452432 139452655 -113803928 + MIR SINE MIR 19 251 -11 198 360 22 22 chr2 139452892 139452981 -113803602 + MIR SINE MIR 65 153 -109 333 186 147 10 chr2 139453149 139453251 -113803332 - L1MA9 LINE L1 -38 6274 6159 180 0 0 0 chr2 139453258 139453278 -113803305 + (TTTTC)n Simple_repeat Simple_repeat 5 24 0 * 549 80 0 0 chr2 139453274 139453349 -113803234 + (TTCC)n Simple_repeat Simple_repeat 2 76 0 571 200 120 0 chr2 139453349 139453499 -113803084 - L1MA9 LINE L1 -147 6165 5998 2057 145 3 0 chr2 139453507 139453804 -113802779 - AluSx SINE Alu -14 298 1 2531 60 0 3 chr2 139454234 139454534 -113802049 + AluY SINE Alu 1 299 -12 1151 162 72 9 chr2 139454718 139454952 -113801631 - MSTB LTR MaLR 0 412 174 3971 25 5 2 chr2 139455053 139455497 -113801086 + L1PA3 LINE L1 5711 6155 0 14638 213 12 25 chr2 139455504 139459861 -113796722 + L1P5 LINE L1 969 5767 -620 577 158 44 18 chr2 139459971 139460085 -113796498 - L1M3e LINE L1 -6920 569 12 1115 190 35 128 chr2 139460534 139460934 -113795649 - MLT1A1 LTR MaLR -2 363 1 636 184 18 151 chr2 139462309 139462527 -113794056 - MER5A DNA MER1_type 0 189 1 3341 93 50 0 chr2 139462877 139463341 -113793242 + L1PB1 LINE L1 5657 6143 -8 34 0 0 0 chr2 139463343 139463377 -113793206 + AT_rich Low_complexity Low_complexity 1 34 0 829 323 38 23 chr2 139464174 139464644 -113791939 + L1MC4a LINE L1 6406 6882 -926 3685 224 69 45 chr2 139464747 139466660 -113789923 + L1M4b LINE L1 548 2532 -4425 306 222 0 0 chr2 139467566 139467620 -113788963 - tRNA-Gly-GGC tRNA tRNA 0 74 21 594 267 97 32 chr2 139469466 139469805 -113786778 - ERVL LTR ERVL -2358 3406 2992 3795 174 30 16 chr2 139470863 139471633 -113784950 + L1MB7 LINE L1 4919 5721 -463 1072 212 114 25 chr2 139471633 139471949 -113784634 + MER2 DNA MER2_type 1 344 0 3795 174 30 16 chr2 139471949 139472404 -113784179 + L1MB7 LINE L1 5721 6168 -16 252 291 0 29 chr2 139473392 139473495 -113783088 - LTR67 LTR ERVL 0 557 458 1495 199 45 53 chr2 139473553 139473708 -113782875 + MLT1A2 LTR MaLR 1 156 -218 189 0 0 0 chr2 139473708 139473729 -113782854 + (GA)n Simple_repeat Simple_repeat 2 22 0 1495 199 45 53 chr2 139473729 139473950 -113782633 + MLT1A2 LTR MaLR 156 374 0 183 208 0 83 chr2 139475735 139475783 -113780800 + L2 LINE L2 353 396 -2918 311 280 160 17 chr2 139475954 139476129 -113780454 + MIR3 SINE MIR 3 202 -6 365 285 114 33 chr2 139476482 139476694 -113779889 - MIR SINE MIR -10 252 17 447 176 22 44 chr2 139476830 139476921 -113779662 + MIR SINE MIR 60 148 -114 528 236 122 65 chr2 139478200 139478429 -113778154 + MIR SINE MIR 1 242 -20 8085 136 63 12 chr2 139478565 139478843 -113777740 + Tigger3(Golem) DNA MER2_type 1491 1754 -1275 2420 95 0 0 chr2 139478843 139479149 -113777434 - AluSg SINE Alu -4 306 1 8085 136 63 12 chr2 139479149 139480334 -113776249 + Tigger3(Golem) DNA MER2_type 1754 3028 -1 3430 212 66 28 chr2 139480335 139480783 -113775800 + L1M1 LINE L1 2578 3008 -4557 1956 215 8 0 chr2 139480783 139481179 -113775404 + MER57A LTR ERV1 5 403 0 3430 212 66 28 chr2 139481179 139482302 -113774281 + L1M1 LINE L1 3008 4223 -3342 1754 199 41 28 chr2 139482302 139482693 -113773890 - MSTD LTR MaLR 0 396 1 3430 212 66 28 chr2 139482693 139483011 -113773572 + L1M1 LINE L1 4223 4527 -3038 360 0 0 0 chr2 139483324 139483364 -113773219 + (TG)n Simple_repeat Simple_repeat 1 40 0 197 348 22 29 chr2 139484254 139484392 -113772191 + L2 LINE L2 2720 2856 -458 827 165 21 5 chr2 139484678 139484866 -113771717 - L1MA8 LINE L1 0 6291 6101 292 200 0 17 chr2 139484917 139484977 -113771606 + Tigger5 DNA MER2_type 2265 2323 0 8435 155 27 6 chr2 139484977 139487182 -113769401 - L1MA8 LINE L1 -187 6104 3845 4126 173 12 26 chr2 139487182 139487643 -113768940 - MER44D DNA MER2_type -1883 604 283 1627 164 35 3 chr2 139487643 139487930 -113768653 - AluJo SINE Alu -16 296 1 4126 173 12 26 chr2 139487930 139488210 -113768373 - MER44D DNA MER2_type -2204 283 1 8435 155 27 6 chr2 139488210 139488365 -113768218 - L1MA8 LINE L1 -2446 3845 3695 2119 109 3 3 chr2 139488366 139488659 -113767924 - AluSp SINE Alu -20 293 1 2174 45 4 8 chr2 139488843 139489111 -113767472 + AluY SINE Alu 35 301 -10 1846 227 96 51 chr2 139489111 139490072 -113766511 + L1MC5 LINE L1 6908 7911 -50 332 234 71 35 chr2 139490418 139490559 -113766024 + L1MB8 LINE L1 5286 5431 -811 979 163 12 0 chr2 139490713 139490873 -113765710 + AluSx SINE Alu 1 162 -150 427 221 6 61 chr2 139490998 139491161 -113765422 + MLT1H LTR MaLR 1 154 -395 8602 127 12 4 chr2 139491212 139493373 -113763210 + L1PA10 LINE L1 3989 6164 -4 955 216 20 44 chr2 139493387 139493683 -113762900 + L1MB8 LINE L1 5860 6148 -30 901 153 0 0 chr2 139493683 139493827 -113762756 + L1PA10 LINE L1 6015 6158 -10 247 263 79 18 chr2 139493837 139493951 -113762632 + MLT1H LTR MaLR 201 321 -228 438 292 47 4 chr2 139494149 139494406 -113762177 + L1ME4a LINE L1 5655 5922 -199 411 262 63 79 chr2 139496573 139496637 -113759946 - MER112 DNA MER1_type -12 248 184 2182 137 3 0 chr2 139496637 139496943 -113759640 - AluSq SINE Alu -6 307 1 411 262 63 79 chr2 139496943 139497130 -113759453 - MER112 DNA MER1_type -76 184 1 2010 204 15 48 chr2 139497748 139498268 -113758315 - MLT1D LTR MaLR -2 503 1 2878 152 52 6 chr2 139498787 139498981 -113757602 + Tigger1 DNA MER2_type 1 185 -2233 2158 128 0 0 chr2 139498981 139499278 -113757305 - AluSg SINE Alu -13 297 1 2878 152 52 6 chr2 139499278 139499604 -113756979 + Tigger1 DNA MER2_type 185 545 -1873 357 321 29 7 chr2 139500050 139500187 -113756396 - MIR SINE MIR -15 247 108 351 232 0 0 chr2 139500446 139500515 -113756068 - MER112 DNA MER1_type -14 246 178 312 159 79 8 chr2 139500608 139500734 -113755849 + (TA)n Simple_repeat Simple_repeat 2 136 0 319 265 110 22 chr2 139500734 139500870 -113755713 - MER112 DNA MER1_type -109 151 4 2716 13 0 0 chr2 139500959 139501259 -113755324 - AluYa5 SINE Alu -11 300 1 340 335 98 15 chr2 139501288 139501613 -113754970 - L2 LINE L2 -410 2904 2553 1210 284 108 30 chr2 139501630 139502229 -113754354 - MLT2F LTR ERVL 0 663 18 10269 128 32 23 chr2 139502334 139502731 -113753852 + Tigger1 DNA MER2_type 584 976 -1442 2176 113 10 3 chr2 139502731 139503032 -113753551 + AluSq SINE Alu 1 303 -10 10269 128 32 23 chr2 139503032 139504237 -113752346 + Tigger1 DNA MER2_type 976 2207 -211 2801 13 0 0 chr2 139504237 139504545 -113752038 - AluYb8 SINE Alu -10 308 1 10269 128 32 23 chr2 139504545 139504759 -113751824 + Tigger1 DNA MER2_type 2207 2418 0 27 73 0 0 chr2 139504788 139504843 -113751740 + AT_rich Low_complexity Low_complexity 1 55 0 471 36 48 84 chr2 139504851 139504934 -113751649 + MADE1 DNA Mariner 1 80 0 395 358 28 0 chr2 139505363 139505539 -113751044 - MIR SINE MIR -33 229 49 421 268 67 80 chr2 139505871 139506170 -113750413 - Charlie8 DNA MER1_type -2091 326 32 305 217 65 43 chr2 139506967 139507105 -113749478 - L1ME4a LINE L1 -21 6100 5960 690 194 90 1 chr2 139507722 139507903 -113748680 - L1MB7 LINE L1 -1 6177 5980 1678 172 8 28 chr2 139507903 139508298 -113748285 - L1MB7 LINE L1 -876 5270 4884 306 182 3 0 chr2 139508335 139508400 -113748183 - MIR SINE MIR -68 140 88 24 0 0 0 chr2 139508516 139508540 -113748043 + AT_rich Low_complexity Low_complexity 1 24 0 1837 123 14 7 chr2 139510459 139510751 -113745832 + L1PB1 LINE L1 5857 6150 -1 447 298 34 68 chr2 139511114 139511239 -113745344 - MIR SINE MIR -10 252 137 189 94 0 0 chr2 139511239 139511271 -113745312 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 447 298 34 68 chr2 139511271 139511380 -113745203 - MIR SINE MIR -125 137 26 271 307 105 18 chr2 139512800 139512914 -113743669 - L2 LINE L2 -2 3270 3147 2113 105 14 0 chr2 139513115 139513427 -113743156 - AluSg SINE Alu 0 316 1 207 305 51 0 chr2 139514549 139514608 -113741975 - MIR3 SINE MIR -46 162 101 11041 202 41 27 chr2 139515648 139516623 -113739960 - L1MB1 LINE L1 -295 6109 5149 1898 153 3 26 chr2 139516623 139516936 -113739647 - AluSx SINE Alu -6 306 1 11041 202 41 27 chr2 139516936 139519684 -113736899 - L1MB1 LINE L1 -1255 5149 2320 228 35 0 0 chr2 139519684 139519713 -113736870 + (CCCTG)n Simple_repeat Simple_repeat 3 31 0 11041 202 41 27 chr2 139519713 139519758 -113736825 - L1MB1 LINE L1 -4084 2320 2277 481 223 14 5 chr2 139519773 139519990 -113736593 + CT-rich Low_complexity Low_complexity 1 219 0 689 129 6 51 chr2 139519990 139520168 -113736415 + (TTTCC)n Simple_repeat Simple_repeat 4 173 0 1354 214 30 0 chr2 139520170 139520432 -113736151 - AluJo SINE Alu -1 311 42 1452 268 41 29 chr2 139520432 139521247 -113735336 - L1MB1 LINE L1 -4051 2331 1421 201 154 0 0 chr2 139521435 139521474 -113735109 + (CA)n Simple_repeat Simple_repeat 2 40 0 216 226 0 0 chr2 139521523 139521585 -113734998 + CT-rich Low_complexity Low_complexity 3 64 0 341 276 65 0 chr2 139521792 139521915 -113734668 - MIR SINE MIR -6 256 126 22 0 0 0 chr2 139522071 139522093 -113734490 + AT_rich Low_complexity Low_complexity 1 22 0 204 179 54 54 chr2 139522097 139522153 -113734430 + L2 LINE L2 3212 3267 -5 1135 217 51 21 chr2 139523125 139523478 -113733105 - MLT2B1 LTR ERVL -75 445 1 277 308 7 126 chr2 139523496 139523782 -113732801 - L2 LINE L2 -193 3079 2828 1676 173 47 76 chr2 139525069 139525514 -113731069 + MSTB1 LTR MaLR 1 432 0 257 212 212 0 chr2 139526530 139526596 -113729987 + L2 LINE L2 3184 3263 -9 245 256 0 74 chr2 139527401 139527522 -113729061 - L1ME3A LINE L1 -222 6446 6335 523 286 73 38 chr2 139528102 139528446 -113728137 - L1ME3A LINE L1 -511 6149 5794 2109 119 7 3 chr2 139528553 139528848 -113727735 - AluSg SINE Alu -14 296 1 708 316 111 40 chr2 139529173 139529924 -113726659 - L1MEd LINE L1 -4630 2195 1231 207 0 0 0 chr2 139530559 139530582 -113726001 + (T)n Simple_repeat Simple_repeat 1 23 0 278 235 24 0 chr2 139530583 139530668 -113725915 - L1MEd LINE L1 -5315 1319 1233 304 338 49 0 chr2 139530730 139530872 -113725711 - L1MEd LINE L1 -5503 1131 983 296 97 113 0 chr2 139530901 139530963 -113725620 + MER53 DNA DNA 1 69 -120 34 72 0 0 chr2 139530970 139531039 -113725544 + AT_rich Low_complexity Low_complexity 1 69 0 407 261 97 79 chr2 139531089 139531469 -113725114 - L1MEd LINE L1 -5656 978 592 191 323 15 0 chr2 139531494 139531559 -113725024 + L2 LINE L2 1820 1885 -1429 684 157 65 54 chr2 139532858 139532885 -113723698 + MER53 DNA DNA 3 28 -161 2169 123 0 19 chr2 139532885 139533202 -113723381 + AluSx SINE Alu 1 311 -1 684 157 65 54 chr2 139533202 139533359 -113723224 + MER53 DNA DNA 28 189 0 327 309 93 6 chr2 139534285 139534447 -113722136 + MIR SINE MIR 39 214 -48 2808 153 20 14 chr2 139535353 139535857 -113720726 - Tigger1 DNA MER2_type -1911 507 1 235 249 133 63 chr2 139536132 139536273 -113720310 - L1ME4a LINE L1 -140 5981 5851 2432 90 0 0 chr2 139536273 139536584 -113719999 - AluSq SINE Alu -2 311 1 235 249 133 63 chr2 139536584 139536759 -113719824 - L1ME4a LINE L1 -270 5851 5643 22 56 0 0 chr2 139536759 139536795 -113719788 + AT_rich Low_complexity Low_complexity 1 36 0 419 252 55 0 chr2 139537669 139537796 -113718787 + MER115 DNA AcHobo 544 677 -16 4114 191 16 13 chr2 139537863 139538769 -113717814 - L1MB7 LINE L1 -16 6404 5497 764 194 24 4 chr2 139538791 139538964 -113717619 - L1MB7 LINE L1 -4862 1510 1247 428 223 176 7 chr2 139538989 139539137 -113717446 - L1MEd LINE L1 -6092 450 278 1105 192 53 30 chr2 139539213 139539479 -113717104 - L1MEd LINE L1 -6256 286 15 572 236 93 53 chr2 139540146 139540371 -113716212 + MIR SINE MIR 16 249 -13 347 271 131 0 chr2 139540640 139540747 -113715836 - L2 LINE L2 -16 3256 3136 2486 81 0 0 chr2 139541021 139541331 -113715252 + AluY SINE Alu 1 310 -1 2264 149 10 39 chr2 139541409 139541825 -113714758 + MSTC LTR MaLR 1 404 -24 225 0 0 0 chr2 139541826 139541851 -113714732 + (CAA)n Simple_repeat Simple_repeat 3 27 0 420 357 140 3 chr2 139542090 139542408 -113714175 - L2 LINE L2 -136 3177 2816 605 203 51 0 chr2 139542408 139542526 -113714057 + MER5C DNA MER1_type 1 124 -200 449 196 31 0 chr2 139542546 139542643 -113713940 + MER5C DNA MER1_type 225 324 0 1131 181 9 19 chr2 139542662 139542878 -113713705 - MER58A DNA MER1_type -10 214 1 21 0 0 0 chr2 139544396 139544417 -113712166 + AT_rich Low_complexity Low_complexity 1 21 0 789 263 17 0 chr2 139546442 139546617 -113709966 + MER45A DNA AcHobo 1 178 0 234 299 41 41 chr2 139547336 139547433 -113709150 - MIR3 SINE MIR -14 194 98 1918 90 13 64 chr2 139547862 139548201 -113708382 - AluSq SINE Alu 0 313 1 22 0 0 0 chr2 139548971 139548993 -113707590 + AT_rich Low_complexity Low_complexity 1 22 0 1877 164 56 13 chr2 139549122 139549495 -113707088 - MLT1B LTR MaLR -1 389 1 330 234 279 36 chr2 139549523 139549733 -113706850 - MIR SINE MIR -8 254 16 220 148 0 37 chr2 139550173 139550227 -113706356 + (GGAA)n Simple_repeat Simple_repeat 4 55 0 615 313 46 9 chr2 139550239 139550472 -113706111 - MIR SINE MIR -10 252 2 501 261 191 13 chr2 139551458 139551657 -113704926 - MIR SINE MIR -21 241 7 418 270 18 9 chr2 139552276 139552387 -113704196 + MIR SINE MIR 38 149 -59 240 122 0 0 chr2 139553810 139553851 -113702732 + (CA)n Simple_repeat Simple_repeat 1 41 0 354 212 9 25 chr2 139554345 139554437 -113702146 + MIR SINE MIR 78 173 -35 517 194 37 37 chr2 139554451 139554585 -113701998 - MIR SINE MIR -39 223 90 202 287 11 43 chr2 139554584 139554678 -113701905 + MIR SINE MIR 171 261 -1 * 189 0 0 0 chr2 139554679 139554700 -113701883 + (ATG)n Simple_repeat Simple_repeat 1 21 0 301 250 54 62 chr2 139555451 139555563 -113701020 - L2 LINE L2 0 3272 3162 185 301 60 0 chr2 139555695 139555778 -113700805 + L2 LINE L2 3149 3236 -77 467 236 191 112 chr2 139556684 139557193 -113699390 + MLT1H LTR MaLR 1 549 0 231 280 173 12 chr2 139557817 139557985 -113698598 - MER117 DNA MER1_type -2 195 1 459 269 246 8 chr2 139558357 139558613 -113697970 - L3 LINE CR1 -815 762 446 554 275 174 28 chr2 139558870 139559226 -113697357 + MLT1I LTR MaLR 2 409 0 270 224 118 26 chr2 139559296 139559372 -113697211 - L2 LINE L2 -55 3258 3176 293 203 31 0 chr2 139559615 139559679 -113696904 - MER5A DNA MER1_type -115 74 9 227 153 34 34 chr2 139559905 139559964 -113696619 + MER5B DNA MER1_type 119 177 -1 363 230 137 0 chr2 139560655 139560794 -113695789 - MER112 DNA MER1_type -17 243 86 24 32 0 0 chr2 139562155 139562186 -113694397 + AT_rich Low_complexity Low_complexity 1 31 0 762 208 11 52 chr2 139562481 139562750 -113693833 - L1MCa LINE L1 -2868 3696 3439 1013 205 66 58 chr2 139562757 139563015 -113693568 + Tigger7 DNA MER2_type 8 267 -2220 514 222 0 0 chr2 139563013 139563112 -113693471 + Tigger7 DNA MER2_type 2393 2491 0 * 409 163 22 11 chr2 139563112 139563204 -113693379 - L1MCa LINE L1 -3121 3443 3351 * 820 273 39 53 chr2 139563190 139563924 -113692659 - L1MCa LINE L1 -4507 2238 1300 307 333 46 84 chr2 139563928 139564237 -113692346 - L1MCa LINE L1 -5669 376 84 2207 117 0 0 chr2 139564237 139564556 -113692027 + AluSg SINE Alu 1 310 0 307 333 46 84 chr2 139564556 139564637 -113691946 - L1MCa LINE L1 -5961 84 1 2900 274 89 34 chr2 139564671 139566371 -113690212 + L1M4 LINE L1 3476 5269 -877 356 220 42 101 chr2 139667990 139668032 -113588551 + MIR SINE MIR 104 147 -115 1792 172 30 57 chr2 139668032 139668205 -113588378 + MLT1B LTR MaLR 1 177 -213 2125 72 7 0 chr2 139668205 139668481 -113588102 + AluY SINE Alu 20 297 -14 1792 172 30 57 chr2 139668481 139668708 -113587875 + MLT1B LTR MaLR 177 390 0 356 220 42 101 chr2 139668708 139668833 -113587750 + MIR SINE MIR 147 261 -1 543 198 259 6 chr2 139668897 139669059 -113587524 + MER3 DNA MER1_type 2 204 -5 229 244 0 0 chr2 139669021 139669066 -113587517 - MER3 DNA MER1_type -119 90 46 * 1363 162 20 20 chr2 139669350 139669603 -113586980 + AluJo SINE Alu 44 296 -16 2191 172 60 14 chr2 139670181 139670931 -113585652 + LTR1B LTR ERV1 1 824 -2 192 377 0 0 chr2 139670934 139670987 -113585596 - L2 LINE L2 -259 3054 3002 737 178 46 81 chr2 139671413 139671610 -113584973 + LTR18B LTR ERVL 1 190 -424 * 1102 151 261 13 chr2 139671608 139671846 -113584737 + LTR18B LTR ERVL 317 613 -1 1813 125 62 0 chr2 139672235 139672523 -113584060 + AluSq SINE Alu 7 312 -1 1339 204 14 7 chr2 139672606 139672886 -113583697 + AluJo SINE Alu 1 282 -30 2394 97 0 3 chr2 139673188 139673499 -113583084 + AluSq SINE Alu 1 310 -3 472 250 189 0 chr2 139675334 139675482 -113581101 - MER45A DNA AcHobo 0 178 3 264 100 0 0 chr2 139675555 139675595 -113580988 + (TC)n Simple_repeat Simple_repeat 1 40 0 * 320 167 0 0 chr2 139675588 139675666 -113580917 + C-rich Low_complexity Low_complexity 1 78 0 198 156 0 0 chr2 139675697 139675742 -113580841 + A-rich Low_complexity Low_complexity 1 45 0 284 306 5 43 chr2 139676734 139676920 -113579663 + GA-rich Low_complexity Low_complexity 1 179 0 235 182 26 13 chr2 139676925 139677002 -113579581 + A-rich Low_complexity Low_complexity 2 79 0 4603 24 0 0 chr2 139677123 139677656 -113578927 + L1PA4 LINE L1 5615 6147 -8 234 0 0 0 chr2 139677660 139677686 -113578897 + (GAA)n Simple_repeat Simple_repeat 2 27 0 250 309 0 58 chr2 139677731 139677919 -113578664 + A-rich Low_complexity Low_complexity 3 179 0 * 352 315 6 43 chr2 139677894 139678168 -113578415 + GA-rich Low_complexity Low_complexity 1 263 0 294 300 25 31 chr2 139678300 139678460 -113578123 + GA-rich Low_complexity Low_complexity 1 159 0 452 260 15 63 chr2 139678532 139679105 -113577478 + GA-rich Low_complexity Low_complexity 1 545 0 458 291 17 32 chr2 139679150 139679545 -113577038 + GA-rich Low_complexity Low_complexity 1 389 0 203 391 0 0 chr2 139680581 139680668 -113575915 + MIR SINE MIR 61 147 -61 392 363 88 12 chr2 139680883 139681225 -113575358 + L2 LINE L2 2022 2389 -925 4191 90 2 0 chr2 139681243 139681796 -113574787 - MER41A LTR ERV1 0 554 1 286 315 143 55 chr2 139681853 139682126 -113574457 + L2 LINE L2 2968 3264 -8 4373 189 60 76 chr2 139682170 139683596 -113572987 + L1M1 LINE L1 1 1403 -5806 1558 166 30 22 chr2 139683593 139684566 -113572017 + L1M1 LINE L1 5578 6725 -640 * 753 220 20 0 chr2 139684680 139684880 -113571703 - L1MEc LINE L1 -3038 3903 3700 276 154 0 0 chr2 139684883 139684935 -113571648 + (TA)n Simple_repeat Simple_repeat 1 52 0 268 185 31 0 chr2 139684951 139685016 -113571567 - L1MEc LINE L1 -3256 3685 3619 192 179 0 0 chr2 139685083 139685122 -113571461 + (TA)n Simple_repeat Simple_repeat 2 40 0 723 192 62 42 chr2 139685214 139685407 -113571176 - MER3 DNA MER1_type -1 208 12 772 253 56 112 chr2 139685408 139686088 -113570495 - L1MEc LINE L1 -3308 3633 2992 997 266 68 55 chr2 139686105 139686478 -113570105 - L1MEc LINE L1 -4183 2939 2573 279 0 0 0 chr2 139686478 139686509 -113570074 + (TG)n Simple_repeat Simple_repeat 2 32 0 997 266 68 55 chr2 139686509 139687026 -113569557 - L1MEc LINE L1 -4549 2573 2037 580 276 97 42 chr2 139687233 139687613 -113568970 - L1MEc LINE L1 -4905 1518 1118 998 285 50 14 chr2 139688254 139688671 -113567912 - L1MEc LINE L1 -5978 445 14 3020 134 24 14 chr2 139689097 139689234 -113567349 + L1MA8 LINE L1 5651 5785 -506 408 40 0 0 chr2 139689234 139689284 -113567299 + (CA)n Simple_repeat Simple_repeat 2 51 0 3020 134 24 14 chr2 139689284 139689634 -113566949 + L1MA8 LINE L1 5785 6146 -145 1064 202 47 94 chr2 139689634 139690015 -113566568 + MLT1A1 LTR MaLR 1 363 -2 3020 134 24 14 chr2 139690015 139690077 -113566506 + L1MA8 LINE L1 6146 6206 -85 395 339 8 15 chr2 139690324 139690454 -113566129 + MIR SINE MIR 51 179 -83 447 194 0 11 chr2 139692273 139692366 -113564217 + MLT1D LTR MaLR 60 151 -503 636 210 70 6 chr2 139692403 139692560 -113564023 + MLT1D LTR MaLR 337 503 -2 375 222 113 38 chr2 139693010 139693167 -113563416 - MIR SINE MIR -55 207 41 1675 163 24 27 chr2 139693179 139693474 -113563109 - AluJb SINE Alu -13 299 6 1659 130 40 86 chr2 139693802 139694103 -113562480 - AluSx SINE Alu -24 288 2 327 272 26 61 chr2 139694114 139694228 -113562355 + L2 LINE L2 3163 3272 0 238 292 150 33 chr2 139694569 139694689 -113561894 - L2 LINE L2 0 3272 3139 311 257 59 137 chr2 139694731 139695038 -113561545 - L2 LINE L2 -10 3262 2980 3059 65 22 10 chr2 139695180 139695442 -113561141 - L1P3 LINE L1 -735 5437 5168 183 42 0 0 chr2 139695442 139695466 -113561117 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 3059 65 22 10 chr2 139695466 139695713 -113560870 - L1P3 LINE L1 -1004 5168 4926 5643 52 11 0 chr2 139695713 139696397 -113560186 + L1PA7 LINE L1 5448 6154 0 25 80 0 30 chr2 139696523 139696623 -113559960 + AT_rich Low_complexity Low_complexity 1 97 0 180 0 0 0 chr2 139696897 139696917 -113559666 + (T)n Simple_repeat Simple_repeat 1 20 0 487 312 84 5 chr2 139698620 139698822 -113557761 + MIR SINE MIR 34 251 -11 2131 153 31 3 chr2 139698861 139699213 -113557370 + THE1B LTR MaLR 3 364 0 2642 91 8 0 chr2 139699645 139699997 -113556586 + THE1A LTR MaLR 1 355 0 9048 88 2 2 chr2 139699997 139701252 -113555331 + THE1A-int LTR MaLR 1 1256 -324 1145 84 0 89 chr2 139701352 139701542 -113555041 + THE1A LTR MaLR 183 355 0 183 337 201 20 chr2 139701543 139701742 -113554841 - L2 LINE L2 -386 2928 2694 1045 208 19 0 chr2 139701819 139702031 -113554552 - MER58A DNA MER1_type 0 224 9 198 294 0 0 chr2 139702041 139702092 -113554491 - L2 LINE L2 -695 2619 2569 958 120 0 0 chr2 139702524 139702649 -113553934 + FLAM_C SINE Alu 1 125 -18 385 304 110 41 chr2 139702755 139703213 -113553370 + L1ME LINE L1 5266 5758 -363 1512 206 46 41 chr2 139703232 139703601 -113552982 + MLT2D LTR ERVL 41 411 -3 269 330 66 50 chr2 139704220 139704402 -113552181 - MIR SINE MIR -56 206 22 219 310 21 117 chr2 139704442 139704587 -113551996 - L2 LINE L2 -8 3264 3134 387 228 60 45 chr2 139704902 139705108 -113551475 - LTR33 LTR ERVL 0 521 237 386 269 67 0 chr2 139705139 139705288 -113551295 - LTR33 LTR ERVL -358 163 5 363 304 130 59 chr2 139705293 139705685 -113550898 + L2 LINE L2 2553 2972 -342 371 231 7 28 chr2 139705714 139705857 -113550726 + CT-rich Low_complexity Low_complexity 3 142 0 2388 245 97 20 chr2 139705895 139706891 -113549692 - L1ME3 LINE L1 -10 6152 5082 495 274 69 10 chr2 139707357 139707561 -113549022 + LTR16A LTR ERVL 224 439 -11 183 295 0 0 chr2 139707870 139707948 -113548635 + (TA)n Simple_repeat Simple_repeat 1 78 0 502 242 105 39 chr2 139707965 139708118 -113548465 - MER115 DNA AcHobo -92 601 439 250 335 104 24 chr2 139708258 139708422 -113548161 + L2 LINE L2 3087 3263 -9 391 184 117 39 chr2 139708544 139708647 -113547936 - MER81 DNA DNA 0 114 4 249 190 35 0 chr2 139709390 139709448 -113547135 - MLT1L LTR MaLR -379 236 177 22437 125 31 49 chr2 139709998 139712923 -113543660 + LTR8-int LTR ERV1 11 2988 -3275 492 18 0 0 chr2 139712923 139712980 -113543603 + (CA)n Simple_repeat Simple_repeat 2 58 0 22437 125 31 49 chr2 139712980 139714966 -113541617 + LTR8-int LTR ERV1 2988 6263 0 3237 106 66 44 chr2 139714966 139715137 -113541446 + LTR8 LTR ERV1 1 167 -524 1866 163 3 0 chr2 139715137 139715425 -113541158 + AluSx SINE Alu 1 289 -23 3237 106 66 44 chr2 139715425 139715827 -113540756 + LTR8 LTR ERV1 167 587 -104 1576 167 27 49 chr2 139715827 139716192 -113540391 + L1M4 LINE L1 5317 5673 -511 1038 206 28 16 chr2 139716192 139716439 -113540144 - L1ME3 LINE L1 -1995 4151 3902 * 2333 236 56 91 chr2 139716436 139716513 -113540070 - L1ME LINE L1 -651 5515 5437 2107 123 0 20 chr2 139716513 139716813 -113539770 + AluSg SINE Alu 1 294 -16 2333 236 56 91 chr2 139716813 139717555 -113539028 - L1ME LINE L1 -729 5437 4670 2822 103 17 46 chr2 139717555 139718031 -113538552 - L1PB1 LINE L1 0 6151 5690 2333 236 56 91 chr2 139718031 139718180 -113538403 - L1ME LINE L1 -1496 4670 4517 240 35 0 0 chr2 139718180 139718209 -113538374 + (CA)n Simple_repeat Simple_repeat 2 30 0 2333 236 56 91 chr2 139718209 139719296 -113537287 - L1ME LINE L1 -1649 4517 3565 264 304 87 49 chr2 139719740 139719924 -113536659 + MIR SINE MIR 6 148 -60 288 0 0 0 chr2 139720373 139720405 -113536178 + (TG)n Simple_repeat Simple_repeat 2 33 0 21 0 0 0 chr2 139720580 139720601 -113535982 + AT_rich Low_complexity Low_complexity 1 21 0 2078 136 0 0 chr2 139722320 139722607 -113533976 + AluSx SINE Alu 1 287 -25 254 189 11 111 chr2 139722811 139722901 -113533682 + MIR SINE MIR 111 191 -71 223 260 0 40 chr2 139723076 139723126 -113533457 - L2 LINE L2 -12 3301 3254 195 296 246 32 chr2 139724231 139724515 -113532068 + L2 LINE L2 2924 3268 -4 340 160 53 0 chr2 139724643 139724718 -113531865 - L1MB4 LINE L1 0 6180 6102 225 313 45 18 chr2 139725654 139725766 -113530817 + MIR SINE MIR 23 137 -125 530 93 13 0 chr2 139725766 139725841 -113530742 + MADE1 DNA Mariner 1 76 -4 342 229 133 0 chr2 139727809 139727914 -113528669 + L2 LINE L2 3195 3313 0 232 254 18 0 chr2 139727941 139727996 -113528587 - L1MB4 LINE L1 -1885 5923 5868 402 247 41 62 chr2 139728023 139728217 -113528366 - L1MC4a LINE L1 -1983 5825 5636 2089 120 0 3 chr2 139728217 139728523 -113528060 + AluSx SINE Alu 1 305 0 609 300 42 80 chr2 139728676 139729013 -113527570 + L2 LINE L2 2949 3272 0 1838 196 74 85 chr2 139729588 139730128 -113526455 - MLT1F1 LTR MaLR 0 567 3 561 274 106 40 chr2 139730670 139730896 -113525687 + MIR SINE MIR 12 252 -10 334 271 108 16 chr2 139731247 139731376 -113525207 + MIR SINE MIR 28 168 -94 526 246 40 16 chr2 139731382 139731508 -113525075 + MIR SINE MIR 3 131 -131 248 250 0 15 chr2 139731658 139731726 -113524857 - MLT1L LTR MaLR -543 72 6 212 319 0 0 chr2 139731998 139732045 -113524538 + L2 LINE L2 3251 3297 -16 21 0 0 0 chr2 139732552 139732573 -113524010 + AT_rich Low_complexity Low_complexity 1 21 0 235 334 208 12 chr2 139732604 139732800 -113523783 + MIR SINE MIR 16 250 -12 407 256 151 17 chr2 139732829 139733001 -113523582 - MIR SINE MIR -21 241 47 2891 98 10 3 chr2 139733415 139733804 -113522779 - L1MA1 LINE L1 -3 6299 5908 600 272 111 8 chr2 139734095 139734330 -113522253 + MIR SINE MIR 3 261 -1 22 35 0 0 chr2 139734618 139734647 -113521936 + AT_rich Low_complexity Low_complexity 1 29 0 34 65 0 0 chr2 139735302 139735364 -113521219 + AT_rich Low_complexity Low_complexity 1 62 0 425 231 21 17 chr2 139735446 139735615 -113520968 + MER3 DNA MER1_type 1 209 0 261 155 0 0 chr2 139736107 139736165 -113520418 + CT-rich Low_complexity Low_complexity 4 61 0 2047 134 0 31 chr2 139736175 139736496 -113520087 - AluSx SINE Alu -1 311 1 1346 215 59 12 chr2 139738086 139738426 -113518157 - MLT1B LTR MaLR 0 390 35 2729 157 111 4 chr2 139738998 139739502 -113517081 - MER89 LTR ERV1 -1 558 1 1938 154 10 0 chr2 139739933 139740238 -113516345 + AluSx SINE Alu 1 308 -4 973 289 73 29 chr2 139740259 139740667 -113515916 - L1MC4a LINE L1 -1863 5945 5520 653 236 106 30 chr2 139741245 139741482 -113515101 - MER102b DNA MER1_type -1 340 86 1504 200 20 17 chr2 139741707 139742002 -113514581 - AluJo SINE Alu -16 296 1 314 317 50 10 chr2 139742469 139742570 -113514013 + MIR SINE MIR 107 211 -51 2154 114 3 3 chr2 139743023 139743313 -113513270 + AluSx SINE Alu 1 290 -22 247 245 0 0 chr2 139745256 139745309 -113511274 - MIR SINE MIR -114 148 96 4058 125 26 15 chr2 139746195 139746853 -113509730 - L1MA4A LINE L1 -4 6299 5635 362 277 52 32 chr2 139747173 139747328 -113509255 + MIR SINE MIR 92 249 -13 198 328 172 41 chr2 139748122 139748436 -113508147 - L2 LINE L2 -5 3267 2913 243 212 106 0 chr2 139748626 139748692 -113507891 - L1MC5 LINE L1 -60 7901 7829 2305 228 108 62 chr2 139748735 139749766 -113506817 - L1MC5 LINE L1 -211 7750 6673 183 341 23 53 chr2 139749971 139750103 -113506480 + L2 LINE L2 2851 2978 -294 306 149 0 0 chr2 139750126 139750173 -113506410 + L1MC5 LINE L1 6743 6789 -1172 262 188 0 21 chr2 139750346 139750394 -113506189 + L2 LINE L2 3221 3267 -5 218 306 65 73 chr2 139750482 139750606 -113505977 + L2 LINE L2 3146 3268 -4 204 40 0 0 chr2 139751307 139751332 -113505251 + (TG)n Simple_repeat Simple_repeat 2 26 0 371 294 11 67 chr2 139751371 139751551 -113505032 + MIR3 SINE MIR 32 201 -7 7637 50 22 6 chr2 139751643 139752576 -113504007 - L1PA7 LINE L1 0 6154 5218 2005 100 4 0 chr2 139755257 139755537 -113501046 - L1MA4 LINE L1 -5 6295 6015 1115 125 0 0 chr2 139755541 139755693 -113500890 - AluSc SINE Alu -26 283 132 1842 116 25 25 chr2 139755693 139755968 -113500615 - AluSg SINE Alu -12 298 24 1058 209 62 5 chr2 139756988 139757198 -113499385 + MER58A DNA MER1_type 2 223 -1 525 225 92 79 chr2 139757239 139757466 -113499117 + L2 LINE L2 3084 3313 0 3712 178 77 72 chr2 139758337 139759396 -113497187 + L1MC5 LINE L1 6838 7901 -60 22 0 0 0 chr2 139759408 139759430 -113497153 + AT_rich Low_complexity Low_complexity 1 22 0 2249 152 32 16 chr2 139759830 139760199 -113496384 + THE1C LTR MaLR 1 375 0 216 228 0 0 chr2 139761584 139761641 -113494942 + (TG)n Simple_repeat Simple_repeat 2 58 0 1937 192 6 12 chr2 139761968 139762266 -113494317 + MLT1A1 LTR MaLR 34 331 -34 1193 174 58 9 chr2 139762266 139762490 -113494093 - MER46A DNA MER2_type 0 236 2 1937 192 6 12 chr2 139762490 139762525 -113494058 + MLT1A1 LTR MaLR 331 365 0 320 339 42 6 chr2 139762923 139763091 -113493492 - MIR SINE MIR -81 181 8 710 256 97 0 chr2 139763542 139763737 -113492846 + MIR SINE MIR 34 247 -15 832 141 16 0 chr2 139763818 139763946 -113492637 - AluSg/x SINE Alu -8 304 175 1113 282 104 16 chr2 139764031 139764538 -113492045 - L1MC/D LINE L1 -1998 5810 5259 729 189 94 16 chr2 139764972 139765013 -113491570 + MER3 DNA MER1_type 4 40 -169 1351 179 4 21 chr2 139765013 139765253 -113491330 + MER46A DNA MER2_type 1 236 0 729 189 94 16 chr2 139765253 139765402 -113491181 + MER3 DNA MER1_type 40 209 0 435 305 105 20 chr2 139766947 139767147 -113489436 - MIR SINE MIR -26 236 20 571 214 138 44 chr2 139767165 139767324 -113489259 + MER5A DNA MER1_type 9 182 -7 190 313 12 0 chr2 139767999 139768079 -113488504 + MIR SINE MIR 168 248 -14 445 281 91 27 chr2 139768730 139768993 -113487590 - L2 LINE L2 -84 3229 2950 227 337 30 20 chr2 139769809 139769910 -113486673 + MER5A DNA MER1_type 51 152 -37 1938 192 95 39 chr2 139770587 139771051 -113485532 - LTR2B LTR ERV1 0 490 1 770 71 0 0 chr2 139771054 139771152 -113485431 - Harlequin LTR ERV1 -3 6893 6796 * 16617 55 11 6 chr2 139771148 139773191 -113483392 - Harlequin LTR ERV1 -3037 3859 1807 3130 74 26 96 chr2 139773179 139773802 -113482781 - Harlequin LTR ERV1 -5476 1420 842 * 2539 170 48 50 chr2 139773855 139774783 -113481800 - Harlequin LTR ERV1 -6355 541 1 2010 186 78 28 chr2 139774783 139775245 -113481338 - LTR2B LTR ERV1 0 490 6 517 243 92 24 chr2 139775399 139775605 -113480978 - L2 LINE L2 -1 3312 3093 692 209 7 27 chr2 139775613 139775761 -113480822 - AluJb SINE Alu -12 300 156 223 289 175 0 chr2 139775797 139775963 -113480620 - L2 LINE L2 -271 3042 2848 225 233 0 17 chr2 139776855 139776915 -113479668 - MIR SINE MIR -3 259 201 194 291 82 55 chr2 139777811 139777921 -113478662 - MIR SINE MIR -148 114 2 1101 174 14 28 chr2 139777977 139778189 -113478394 - MER20 DNA MER1_type -10 209 1 191 311 0 0 chr2 139778266 139778311 -113478272 - L2 LINE L2 -20 3252 3208 1576 214 98 4 chr2 139778568 139778986 -113477597 + MER89 LTR ERV1 1 559 0 1956 195 66 19 chr2 139779616 139780099 -113476484 - Charlie4a DNA MER1_type -2 506 1 332 241 48 76 chr2 139780191 139780336 -113476247 + L2 LINE L2 3167 3307 -6 889 108 8 0 chr2 139780693 139780813 -113475770 - FLAM_C SINE Alu -22 121 1 208 238 171 29 chr2 139781136 139781241 -113475342 - MIR SINE MIR -78 184 65 185 258 121 0 chr2 139781361 139781427 -113475156 - MER5C DNA MER1_type -2 322 249 335 260 32 24 chr2 139781549 139781672 -113474911 - MER5C DNA MER1_type -200 124 1 589 286 79 13 chr2 139782546 139782773 -113473810 + MIR SINE MIR 21 262 0 829 233 256 5 chr2 139783293 139783683 -113472900 - MLT1D LTR MaLR -4 501 14 234 234 0 0 chr2 139784243 139784290 -113472293 - MLT1I LTR MaLR -228 181 135 823 226 49 25 chr2 139784341 139784545 -113472038 - AluJo SINE Alu -103 209 1 589 215 33 8 chr2 139784545 139784666 -113471917 - MLT1I LTR MaLR -271 138 15 291 252 24 0 chr2 139786362 139786489 -113470094 + CT-rich Low_complexity Low_complexity 3 132 0 5766 62 7 8 chr2 139786498 139787235 -113469348 - L1PA7 LINE L1 -1 6153 5418 213 290 57 57 chr2 139787247 139787371 -113469212 + L2 LINE L2 1973 2096 -1218 399 274 23 57 chr2 139788776 139788951 -113467632 - HAL1b LINE L1 -305 1043 875 416 299 98 10 chr2 139789142 139789336 -113467247 + MLT1L LTR MaLR 353 563 -52 1441 197 108 89 chr2 139789337 139790013 -113466570 + L1ME LINE L1 3202 3890 -2256 1353 180 35 21 chr2 139790011 139790350 -113466233 + L1ME LINE L1 4963 5306 -840 * 976 107 43 0 chr2 139790351 139790491 -113466092 + LTR8 LTR ERV1 546 691 0 6200 136 83 7 chr2 139790491 139791519 -113465064 + HUERS-P1 LTR ERV1 1 1106 -5157 270 0 0 0 chr2 139791778 139791808 -113464775 + (A)n Simple_repeat Simple_repeat 1 30 0 329 226 12 12 chr2 139792106 139792190 -113464393 + MIR SINE MIR 13 96 -166 1215 198 92 92 chr2 139792461 139793013 -113463570 + L1MC5 LINE L1 6927 7481 -480 309 26 0 0 chr2 139793013 139793051 -113463532 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 1215 198 92 92 chr2 139793051 139793241 -113463342 + L1MC5 LINE L1 7480 7669 -292 899 266 86 4 chr2 139793250 139793506 -113463077 - LTR16A1 LTR ERVL -7 450 174 269 318 64 0 chr2 139793884 139793994 -113462589 + MER103 DNA DNA 3 119 -47 395 139 0 28 chr2 139794017 139794089 -113462494 + HsTC2 DNA Tc2 5 74 -1824 1471 198 72 31 chr2 139794111 139794404 -113462179 + AluJo SINE Alu 1 305 -7 683 224 0 7 chr2 139796324 139796471 -113460112 - MIR SINE MIR -26 236 91 538 262 24 12 chr2 139796776 139796940 -113459643 - MIR SINE MIR -13 249 84 535 304 69 23 chr2 139797045 139797351 -113459232 + L1ME LINE L1 5452 5771 -350 23 0 0 0 chr2 139797483 139797506 -113459077 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 139797557 139797580 -113459003 + AT_rich Low_complexity Low_complexity 1 23 0 1400 135 31 22 chr2 139797619 139797871 -113458712 + AluSx SINE Alu 54 307 0 264 329 34 40 chr2 139798452 139798601 -113457982 + L1MC/D LINE L1 5509 5656 -2152 1978 218 51 31 chr2 139798862 139799386 -113457197 - MER74A LTR ERVL -2 556 19 1743 174 24 7 chr2 139799386 139799680 -113456903 - AluJb SINE Alu -13 299 1 1978 218 51 31 chr2 139799680 139799700 -113456883 - MER74A LTR ERVL -539 19 1 523 201 136 11 chr2 139801264 139801424 -113455159 - MER5A DNA MER1_type -3 186 4 262 277 151 0 chr2 139802746 139802865 -113453718 + MIR SINE MIR 79 215 -47 253 222 22 0 chr2 139803605 139803650 -113452933 + LTR67 LTR ERVL 107 152 -405 * 881 252 31 67 chr2 139803612 139804029 -113452554 + MLT1J LTR MaLR 110 511 0 180 310 0 0 chr2 139804268 139804326 -113452257 + MIR SINE MIR 174 231 -31 183 42 0 0 chr2 139804984 139805008 -113451575 + (TTG)n Simple_repeat Simple_repeat 1 24 0 193 234 138 21 chr2 139805634 139805728 -113450855 - L2 LINE L2 -1 3312 3208 797 250 53 0 chr2 139805736 139805964 -113450619 + MIR SINE MIR 2 241 -21 221 313 0 90 chr2 139806067 139806201 -113450382 - L2 LINE L2 -181 3091 2970 297 89 0 0 chr2 139806242 139806287 -113450296 + (TTTG)n Simple_repeat Simple_repeat 1 45 0 2441 60 0 0 chr2 139806721 139807006 -113449577 + AluY SINE Alu 1 285 -26 411 38 0 0 chr2 139807006 139807059 -113449524 + (CAGAGA)n Simple_repeat Simple_repeat 2 54 0 635 239 0 8 chr2 139807967 139808097 -113448486 - FLAM_C SINE Alu -4 129 1 277 223 60 161 chr2 139808225 139808592 -113447991 + MLT1K LTR MaLR 253 582 -6 25 0 0 0 chr2 139808742 139808767 -113447816 + AT_rich Low_complexity Low_complexity 1 25 0 319 235 140 5 chr2 139808973 139809126 -113447457 - MLT1I LTR MaLR -8 416 269 552 257 73 29 chr2 139809910 139810116 -113446467 - MIR SINE MIR -19 243 29 2183 135 42 17 chr2 139810148 139810503 -113446080 + THE1B LTR MaLR 1 364 0 7550 85 4 0 chr2 139810503 139811469 -113445114 + THE1B-int LTR MaLR 1 970 -610 726 146 27 0 chr2 139811469 139811579 -113445004 + THE1B LTR MaLR 252 364 0 1651 152 0 30 chr2 139811660 139811923 -113444660 + AluJo SINE Alu 1 255 -57 626 155 29 8 chr2 139812532 139812655 -113443928 + MER5A DNA MER1_type 1 127 -51 656 253 42 16 chr2 139813363 139813553 -113443030 + MIR SINE MIR 68 262 0 27 0 0 0 chr2 139814567 139814594 -113441989 + AT_rich Low_complexity Low_complexity 1 27 0 590 203 28 11 chr2 139814846 139815023 -113441560 + GA-rich Low_complexity Low_complexity 1 180 0 2110 155 6 18 chr2 139815186 139815527 -113441056 + MER1B DNA MER1_type 1 337 0 252 143 11 176 chr2 139816304 139816395 -113440188 + L1ME LINE L1 5453 5528 -636 420 195 39 0 chr2 139816456 139816610 -113439973 + GA-rich Low_complexity Low_complexity 1 160 0 633 224 13 0 chr2 139817138 139817460 -113439123 + (ATG)n Simple_repeat Simple_repeat 1 326 0 644 188 5 38 chr2 139817494 139817680 -113438903 + (ATG)n Simple_repeat Simple_repeat 1 180 0 921 131 6 27 chr2 139817689 139817872 -113438711 + (ATGGTG)n Simple_repeat Simple_repeat 2 180 0 364 301 134 14 chr2 139817895 139818111 -113438472 - MIR SINE MIR -11 251 10 299 287 45 69 chr2 139818993 139819126 -113437457 - L2 LINE L2 -203 3069 2941 1232 224 143 33 chr2 139819126 139819581 -113437002 - MLT1D LTR MaLR 0 505 1 299 287 45 69 chr2 139819581 139819649 -113436934 - L2 LINE L2 -331 2941 2873 1733 258 18 0 chr2 139819853 139820307 -113436276 + L1MC4 LINE L1 7217 7678 -364 383 75 0 0 chr2 139820374 139820427 -113436156 - MADE1 DNA Mariner 0 80 28 191 61 30 0 chr2 139821746 139821779 -113434804 + (TA)n Simple_repeat Simple_repeat 1 34 0 252 229 121 0 chr2 139821882 139821965 -113434618 - L2 LINE L2 -488 2826 2734 5290 69 21 6 chr2 139821980 139822680 -113433903 + L1PA8 LINE L1 5461 6171 -1 401 323 37 6 chr2 139822786 139822950 -113433633 - MER5B DNA MER1_type 0 178 10 181 230 80 30 chr2 139823486 139823586 -113432997 - MIR SINE MIR -64 144 40 1978 181 27 126 chr2 139824259 139824777 -113431806 - MER70A LTR ERVL -5 467 1 222 222 0 0 chr2 139825053 139825098 -113431485 + (TATATG)n Simple_repeat Simple_repeat 4 48 0 385 225 186 32 chr2 139828324 139828541 -113428042 + MLT2B2 LTR ERVL 2 249 -165 2225 123 3 0 chr2 139828625 139828926 -113427657 + AluSq SINE Alu 1 302 -11 10158 193 56 12 chr2 139828958 139831812 -113424771 - L1MC3 LINE L1 -8 7777 4691 5085 167 41 58 chr2 139831804 139834093 -113422490 - L1MA9 LINE L1 0 6312 4030 * 2346 248 49 28 chr2 139834091 139835023 -113421560 - L1MC3 LINE L1 -1437 4709 3758 * 465 255 92 13 chr2 139837288 139837441 -113419142 + MIR SINE MIR 74 238 -24 2210 101 0 44 chr2 139837595 139837912 -113418671 + AluSx SINE Alu 1 303 -9 751 269 47 19 chr2 139837958 139838214 -113418369 + MLT1H1 LTR MaLR 14 276 -279 192 299 42 101 chr2 139839139 139839356 -113417227 + MIR SINE MIR 20 223 -39 210 286 0 0 chr2 139839365 139839414 -113417169 + (CAG)n Simple_repeat Simple_repeat 2 50 0 34 0 0 0 chr2 139839839 139839873 -113416710 + AT_rich Low_complexity Low_complexity 1 34 0 610 284 73 29 chr2 139840095 139840370 -113416213 + MARNA DNA Mariner 287 573 -13 329 326 37 0 chr2 139840449 139840584 -113415999 + L2 LINE L2 2215 2354 -960 267 156 0 0 chr2 139840736 139840781 -113415802 - MSTA LTR MaLR 0 428 384 1593 164 125 3 chr2 139840833 139841168 -113415415 - MSTA LTR MaLR -52 376 1 262 233 96 14 chr2 139843084 139843157 -113413426 - L2 LINE L2 -2 3270 3192 780 229 73 73 chr2 139844290 139844604 -113411979 - MER102b DNA MER1_type -26 315 2 923 138 74 79 chr2 139844808 139845011 -113411572 + AluSx SINE Alu 2 203 -109 340 104 91 0 chr2 139845189 139845266 -113411317 + L1M4 LINE L1 3160 3243 -2903 40942 33 23 1 chr2 139845280 139851331 -113405252 + L1PA2 LINE L1 1 6182 0 475 308 0 22 chr2 139851333 139851557 -113405026 + L1M4 LINE L1 3259 3477 -2669 2013 132 23 20 chr2 139851581 139851923 -113404660 + MER61A LTR ERV1 1 343 0 372 235 0 41 chr2 139852201 139852299 -113404284 + MIR SINE MIR 159 252 -10 253 278 153 28 chr2 139853072 139853216 -113403367 - MIR SINE MIR -72 190 29 324 310 124 0 chr2 139853555 139853684 -113402899 - MIR SINE MIR -18 244 100 273 275 0 29 chr2 139853705 139853774 -113402809 - L2 LINE L2 -16 3256 3190 283 297 0 0 chr2 139853785 139853849 -113402734 - L2 LINE L2 -16 3256 3193 297 281 0 0 chr2 139853868 139853932 -113402651 - L2 LINE L2 -16 3256 3193 707 239 40 80 chr2 139853935 139854186 -113402397 - MIR SINE MIR 0 262 22 411 350 7 0 chr2 139854419 139854559 -113402024 + MIR SINE MIR 58 198 -64 275 341 78 8 chr2 139854694 139854823 -113401760 + MIR3 SINE MIR 65 202 -6 191 321 6 93 chr2 139854947 139855109 -113401474 - MIR SINE MIR -38 224 77 2279 94 0 16 chr2 139855460 139855768 -113400815 + AluSx SINE Alu 1 303 -9 2424 118 38 0 chr2 139855936 139856333 -113400250 - L1MC1 LINE L1 0 6333 5922 1332 220 3 37 chr2 139856333 139856633 -113399950 + Tigger5 DNA MER2_type 1 290 -2033 416 147 27 0 chr2 139856644 139856719 -113399864 + Tigger5 DNA MER2_type 2247 2323 0 4214 131 1 2 chr2 139856719 139857457 -113399126 - L1MC1 LINE L1 -410 5923 5186 202 288 34 17 chr2 139858134 139858193 -113398390 + MIR SINE MIR 46 105 -157 500 361 142 12 chr2 139858405 139858729 -113397854 + HAL1 LINE L1 224 591 -1911 1445 207 74 72 chr2 139858729 139859232 -113397351 + MLT1D LTR MaLR 2 505 0 3493 112 14 5 chr2 139860890 139861139 -113395444 + L1MA4A LINE L1 5743 5988 -315 423 0 0 0 chr2 139861139 139861186 -113395397 + (TG)n Simple_repeat Simple_repeat 2 48 0 3493 112 14 5 chr2 139861186 139861488 -113395095 + L1MA4A LINE L1 5988 6299 -4 2127 75 0 4 chr2 139861515 139861783 -113394800 + AluY SINE Alu 37 303 -8 236 301 58 39 chr2 139861942 139862045 -113394538 + MIR SINE MIR 156 260 -2 568 370 27 3 chr2 139862051 139862351 -113394232 - L3 LINE CR1 -74 1503 1197 557 304 115 16 chr2 139863078 139863331 -113393252 - L3 LINE CR1 -773 804 527 215 288 102 0 chr2 139863996 139864055 -113392528 - L2 LINE L2 -50 3263 3199 3790 113 18 2 chr2 139864186 139864754 -113391829 + L1PA16 LINE L1 5586 6162 -4 305 281 124 26 chr2 139864911 139865064 -113391519 + MIR SINE MIR 20 187 -75 990 204 46 102 chr2 139865092 139865416 -113391167 - MLT1A1 LTR MaLR 0 365 60 592 118 0 2 chr2 139865416 139865662 -113390921 + AluSg SINE Alu 1 303 -9 372 138 31 0 chr2 139865663 139865728 -113390855 - MLT1A1 LTR MaLR -298 67 1 1672 98 0 0 chr2 139865826 139866040 -113390543 + AluSg/x SINE Alu 98 311 -1 319 229 0 12 chr2 139866068 139866151 -113390432 + MIR SINE MIR 116 197 -65 383 0 0 21 chr2 139866324 139866372 -113390211 + (CA)n Simple_repeat Simple_repeat 2 48 0 2552 285 78 24 chr2 139866398 139869377 -113387206 - L1ME3A LINE L1 -5 6559 3380 322 245 10 0 chr2 139869380 139869482 -113387101 - L1ME3A LINE L1 -4577 1963 1861 969 280 9 9 chr2 139869490 139869826 -113386757 - L1M4 LINE L1 -3161 2985 2650 564 350 60 29 chr2 139869868 139870251 -113386332 - L1ME LINE L1 -392 5729 5335 1202 168 63 23 chr2 139870545 139870677 -113385906 - MER33 DNA MER1_type -2261 324 199 4486 161 44 85 chr2 139870677 139871372 -113385211 + Tigger6a DNA MER2_type 1 634 -963 1769 182 0 19 chr2 139871372 139871685 -113384898 + AluJo SINE Alu 1 307 -5 4486 161 44 85 chr2 139871685 139872117 -113384466 + Tigger6a DNA MER2_type 634 1082 -1 1202 168 63 23 chr2 139872117 139872302 -113384281 - MER33 DNA MER1_type -2386 199 1 910 284 21 8 chr2 139873124 139873363 -113383220 + MIR SINE MIR 3 244 -18 4640 51 0 0 chr2 139873772 139874344 -113382239 + L1PA4 LINE L1 5583 6154 -1 276 30 0 0 chr2 139874464 139874497 -113382086 + (CA)n Simple_repeat Simple_repeat 1 33 0 802 281 80 4 chr2 139874509 139874873 -113381710 - L1MC4a LINE L1 -312 5809 5506 231 336 15 0 chr2 139875275 139875406 -113381177 + L1ME4a LINE L1 5765 5897 -1911 234 0 0 0 chr2 139875832 139875858 -113380725 + (CA)n Simple_repeat Simple_repeat 2 27 0 267 168 104 56 chr2 139875872 139875997 -113380586 + L1ME4a LINE L1 5987 6117 -4 21 0 0 0 chr2 139876001 139876022 -113380561 + AT_rich Low_complexity Low_complexity 1 21 0 526 268 170 27 chr2 139876055 139876279 -113380304 - MIR SINE MIR -4 258 3 1600 229 57 14 chr2 139876313 139876763 -113379820 - LTR40c LTR ERVL 0 519 1 294 265 0 0 chr2 139876765 139876833 -113379750 - MLT1K LTR MaLR -5 583 516 387 0 0 0 chr2 139876864 139876882 -113379701 + (TG)n Simple_repeat Simple_repeat 1 61 0 387 0 0 0 chr2 139876882 139876925 -113379658 + (TG)n Simple_repeat Simple_repeat 2 44 0 773 312 105 36 chr2 139876938 139877329 -113379254 - MLT1K LTR MaLR -158 430 13 1269 237 92 59 chr2 139878555 139879078 -113377505 - MLT1F LTR MaLR -1 541 2 183 42 0 0 chr2 139879852 139879876 -113376707 + (TC)n Simple_repeat Simple_repeat 1 24 0 4226 188 26 11 chr2 139881910 139883446 -113373137 + L1MB7 LINE L1 4557 6119 -65 892 186 86 24 chr2 139883447 139883657 -113372926 - MER58A DNA MER1_type 0 224 2 2260 122 14 25 chr2 139885366 139885728 -113370855 + THE1C LTR MaLR 1 358 -17 2358 119 16 24 chr2 139886003 139886381 -113370202 + THE1C LTR MaLR 1 375 0 329 238 119 0 chr2 139886382 139886483 -113370100 - MLT1L LTR MaLR 0 615 503 230 132 53 0 chr2 139886679 139886717 -113369866 - MLT1I LTR MaLR -272 137 98 273 254 16 0 chr2 139886726 139886789 -113369794 - MLT1F LTR MaLR -458 84 21 1692 204 15 57 chr2 139887918 139888374 -113368209 + LTR56 LTR ERV1 9 445 0 648 271 86 25 chr2 139888653 139888967 -113367616 - MER46C DNA MER2_type -4 334 2 384 115 0 16 chr2 139889202 139889263 -113367320 + LOR1a LTR ERV1 1 60 -437 1115 177 15 92 chr2 139889282 139889542 -113367041 + LOR1b LTR ERV1 222 461 0 3295 120 117 0 chr2 139889559 139890124 -113366459 - LTR24C LTR ERV1 0 635 5 586 248 66 139 chr2 139890179 139890619 -113365964 + L2 LINE L2 113 520 -2794 1671 206 60 67 chr2 139890643 139891061 -113365522 + MER21B LTR ERV1 12 426 -437 3177 262 89 23 chr2 139891163 139892254 -113364329 - ERVL LTR ERVL -525 5239 4077 834 233 72 18 chr2 139892355 139892578 -113364005 - MER4D LTR ERV1 -662 241 7 1008 204 22 9 chr2 139892686 139892917 -113363666 + AluJo SINE Alu 64 297 -15 31 0 0 0 chr2 139892946 139892977 -113363606 + AT_rich Low_complexity Low_complexity 1 31 0 302 290 8 16 chr2 139893057 139893181 -113363402 - L1MC/D LINE L1 -1976 5832 5710 669 149 9 9 chr2 139893601 139893715 -113362868 + MLT1B LTR MaLR 272 385 -5 28 71 0 0 chr2 139894152 139894208 -113362375 + AT_rich Low_complexity Low_complexity 1 56 0 357 43 0 0 chr2 139894247 139894294 -113362289 + (TG)n Simple_repeat Simple_repeat 2 48 0 240 35 0 0 chr2 139894313 139894342 -113362241 + (TA)n Simple_repeat Simple_repeat 2 30 0 8727 80 2 1 chr2 139894703 139895893 -113360690 + L1P LINE L1 1981 3171 -2975 1550 129 16 23 chr2 139896497 139896753 -113359830 - AluSx SINE Alu -10 302 49 1110 205 70 31 chr2 139896755 139897082 -113359501 - Charlie4a DNA MER1_type -7 501 162 185 254 68 0 chr2 139897944 139898003 -113358580 + L2 LINE L2 3210 3272 0 744 225 52 16 chr2 139898392 139898583 -113358000 - MLT1D LTR MaLR -306 199 2 1182 222 24 104 chr2 139898585 139899008 -113357575 - MLT1D-int LTR MaLR -1 1370 982 2753 36 0 0 chr2 139899020 139899328 -113357255 - AluYa5 SINE Alu -3 308 1 537 150 18 53 chr2 139899414 139899527 -113357056 - AluSg/x SINE Alu -6 304 196 646 157 64 0 chr2 139900101 139900241 -113356342 - L1MB2 LINE L1 -23 6148 6000 570 210 27 54 chr2 139900304 139900490 -113356093 + MER112 DNA MER1_type 67 247 -13 1968 140 0 0 chr2 139900696 139900981 -113355602 + AluSq SINE Alu 1 285 -28 32 0 0 0 chr2 139900982 139901014 -113355569 + AT_rich Low_complexity Low_complexity 1 32 0 496 235 25 0 chr2 139901132 139901251 -113355332 + MIR SINE MIR 112 233 -29 567 211 76 90 chr2 139901404 139901627 -113354956 - MER58 DNA MER1_type -116 225 6 771 236 34 11 chr2 139902006 139902184 -113354399 + MER5A DNA MER1_type 1 182 -7 2048 262 16 47 chr2 139904331 139904741 -113351842 + L1M4 LINE L1 4481 4861 -1285 1573 206 28 0 chr2 139904741 139905028 -113351555 + AluJb SINE Alu 3 297 -15 2048 262 16 47 chr2 139905028 139905343 -113351240 + L1M4 LINE L1 4861 5184 -962 2027 245 63 33 chr2 139905443 139906617 -113349966 + ERVL LTR ERVL 2262 3510 -2254 651 202 8 0 chr2 139907528 139907652 -113348931 - FLAM_C SINE Alu -17 126 2 23 0 0 0 chr2 139907663 139907686 -113348897 + AT_rich Low_complexity Low_complexity 1 23 0 534 341 31 50 chr2 139907907 139908227 -113348356 - LTR16C LTR ERVL -19 472 159 297 257 176 7 chr2 139908811 139908959 -113347624 + MIR SINE MIR 67 239 -23 1517 172 14 17 chr2 139910096 139910393 -113346190 - AluY SINE Alu -13 298 3 1881 182 3 77 chr2 139910394 139910851 -113345732 - L1M3 LINE L1 -496 5687 5198 1634 202 65 16 chr2 139910851 139911223 -113345360 + MLT1B LTR MaLR 1 390 0 1881 182 3 77 chr2 139911223 139911369 -113345214 - L1M3 LINE L1 -985 5198 5143 2128 131 93 15 chr2 139911369 139911765 -113344818 + MSTA LTR MaLR 2 428 0 1881 182 3 77 chr2 139911765 139911799 -113344784 - L1M3 LINE L1 -1040 5143 5108 597 249 40 17 chr2 139912101 139912274 -113344309 + MLT1D LTR MaLR 1 177 -328 976 213 8 20 chr2 139912287 139912531 -113344052 - L1MC1 LINE L1 -17 6316 6076 219 220 0 0 chr2 139912689 139912739 -113343844 + (TG)n Simple_repeat Simple_repeat 1 50 0 748 124 92 0 chr2 139912769 139912922 -113343661 + L1MB2 LINE L1 6001 6167 -4 568 233 25 12 chr2 139915233 139915396 -113341187 + MIR SINE MIR 94 258 -4 403 204 32 0 chr2 139915432 139915525 -113341058 + L1MD2 LINE L1 6250 6345 -14 1547 225 3 0 chr2 139916025 139916332 -113340251 + AluJo SINE Alu 1 308 -4 2362 109 0 0 chr2 139916354 139916658 -113339925 + AluSc SINE Alu 1 304 -5 239 340 54 16 chr2 139917967 139918152 -113338431 + L2 LINE L2 2855 3046 -226 4537 265 47 24 chr2 139920048 139921758 -113334825 - ERVL LTR ERVL -2903 2861 1065 681 238 134 9 chr2 139922697 139922920 -113333663 + MIR SINE MIR 7 257 -5 456 179 32 0 chr2 139922956 139923051 -113333532 + L1MD2 LINE L1 6249 6346 -13 1897 171 3 0 chr2 139923550 139923855 -113332728 + AluJo SINE Alu 1 306 -6 713 184 0 0 chr2 139923955 139924069 -113332514 - FLAM_C SINE Alu -28 115 2 485 254 95 37 chr2 139924169 139924464 -113332119 + HAL1b LINE L1 174 485 -863 22 0 0 0 chr2 139924602 139924624 -113331959 + AT_rich Low_complexity Low_complexity 1 22 0 294 239 87 0 chr2 139924654 139924746 -113331837 + HAL1b LINE L1 440 539 -809 251 296 81 12 chr2 139924972 139925124 -113331459 - L1MEd LINE L1 -2397 3732 3565 2229 103 17 7 chr2 139925124 139925426 -113331157 - AluSx SINE Alu -7 305 1 251 296 81 12 chr2 139925426 139925445 -113331138 - L1MEd LINE L1 -2564 3565 3549 490 293 30 60 chr2 139925527 139925861 -113330722 - L1MEd LINE L1 -3376 2753 2430 1094 249 75 38 chr2 139926129 139926599 -113329984 - L1MC4a LINE L1 -1753 6038 5552 820 283 28 7 chr2 139926601 139926891 -113329692 - L1MC4a LINE L1 -2382 3747 3452 767 236 52 0 chr2 139927005 139927196 -113329387 + MIR SINE MIR 12 212 -50 576 275 60 45 chr2 139927237 139927806 -113328777 - L1MEd LINE L1 -4828 1482 971 439 349 6 0 chr2 139927926 139928101 -113328482 + MIR SINE MIR 42 217 -45 1920 296 94 15 chr2 139930253 139931121 -113325462 - L2 LINE L2 -1869 1445 509 3495 206 49 48 chr2 139931124 139931974 -113324609 - MER21B LTR ERV1 -1 862 12 467 259 68 141 chr2 139931998 139932438 -113324145 - L2 LINE L2 -2794 520 113 1342 133 5 0 chr2 139932560 139932748 -113323835 + AluSg/x SINE Alu 88 276 -36 429 202 34 11 chr2 139932755 139932844 -113323739 - MER58 DNA MER1_type -250 91 1 202 307 9 53 chr2 139932935 139933049 -113323534 - MIR SINE MIR -96 166 58 2208 99 3 7 chr2 139933082 139933365 -113323218 - AluSx SINE Alu -17 295 14 458 209 15 67 chr2 139933374 139933435 -113323148 - MIR SINE MIR -2 260 197 875 208 57 24 chr2 139933435 139933647 -113322936 + MER20 DNA MER1_type 1 219 0 458 209 15 67 chr2 139933647 139933719 -113322864 - MIR SINE MIR -65 197 134 375 246 78 77 chr2 139933825 139934085 -113322498 - MIR3 SINE MIR 0 262 5 222 214 157 0 chr2 139934925 139934995 -113321588 + MIR SINE MIR 182 262 0 549 250 49 0 chr2 139935185 139935329 -113321254 - MIR SINE MIR 0 262 112 2162 120 0 0 chr2 139935447 139935765 -113320818 - AluSq SINE Alu 0 313 1 651 215 31 36 chr2 139935958 139936153 -113320430 - MER112 DNA MER1_type 0 260 67 768 118 92 0 chr2 139936214 139936367 -113320216 + L1MB2 LINE L1 6001 6167 -4 230 252 163 30 chr2 139939627 139939762 -113316821 - MLT1L LTR MaLR -3 612 460 1525 194 41 12 chr2 139939924 139940244 -113316339 - MLT1D LTR MaLR -176 329 1 970 214 58 108 chr2 139940422 139940835 -113315748 - MER66A LTR ERV1 -19 515 73 1426 180 27 91 chr2 139940892 139941344 -113315239 - MLT2D LTR ERVL 0 520 1 253 308 53 15 chr2 139942601 139942734 -113313849 + MIR SINE MIR 2 139 -123 450 181 119 167 chr2 139942797 139943133 -113313450 - MLT1J LTR MaLR -160 351 32 679 218 0 0 chr2 139943246 139943379 -113313204 - MER96 DNA MER1_type? -34 141 9 245 161 0 0 chr2 139945305 139945353 -113311230 - MLT1E2 LTR MaLR -2 610 544 1565 228 65 0 chr2 139945430 139945895 -113310688 - MLT1E2 LTR MaLR -62 564 93 362 331 41 6 chr2 139946195 139946364 -113310219 - MIR SINE MIR -43 219 45 2345 79 0 13 chr2 139946371 139946722 -113309861 - AluY SINE Alu 0 311 1 180 0 0 0 chr2 139946722 139946742 -113309841 + (T)n Simple_repeat Simple_repeat 1 20 0 562 226 94 19 chr2 139948381 139948540 -113308043 + MIR SINE MIR 42 212 -50 1798 159 29 37 chr2 139948950 139949301 -113307282 + MER7A DNA MER2_type 1 346 0 562 191 13 59 chr2 139950160 139950312 -113306271 - MER5A DNA MER1_type -40 149 5 476 143 60 0 chr2 139951008 139951092 -113305491 - L1MA4A LINE L1 -22 6281 6193 24 0 0 0 chr2 139951288 139951312 -113305271 + AT_rich Low_complexity Low_complexity 1 24 0 252 81 108 0 chr2 139953002 139953039 -113303544 - MLT2F LTR ERVL 0 663 623 216 0 0 0 chr2 139953040 139953064 -113303519 + (CA)n Simple_repeat Simple_repeat 1 24 0 30 45 0 0 chr2 139953076 139953120 -113303463 + AT_rich Low_complexity Low_complexity 1 44 0 231 143 143 0 chr2 139953123 139953172 -113303411 + MLT2F LTR ERVL 565 620 -43 22 0 0 0 chr2 139953179 139953201 -113303382 + AT_rich Low_complexity Low_complexity 1 22 0 1481 258 77 26 chr2 139953274 139953564 -113303019 - MLT2F LTR ERVL -187 476 153 1604 185 17 3 chr2 139953564 139953851 -113302732 + AluJo SINE Alu 1 291 -21 1481 258 77 26 chr2 139953851 139954013 -113302570 - MLT2F LTR ERVL -510 153 1 10179 226 82 27 chr2 139954013 139957287 -113299296 - ERVL-F LTR ERVL -8 5756 2263 2153 151 0 0 chr2 139957776 139958088 -113298495 - AluSx SINE Alu 0 312 1 910 208 44 11 chr2 139959719 139959902 -113296681 - MER5A DNA MER1_type 0 189 1 1239 169 113 66 chr2 139960280 139960600 -113295983 + MER58B DNA MER1_type 6 340 -1 2057 115 0 24 chr2 139960864 139961159 -113295424 - AluSp SINE Alu -19 294 7 22 56 0 0 chr2 139962047 139962083 -113294500 + AT_rich Low_complexity Low_complexity 1 36 0 714 278 106 24 chr2 139962318 139962743 -113293840 - L1MC4a LINE L1 -1633 6175 5716 2251 91 11 0 chr2 139963027 139963314 -113293269 + AluSc SINE Alu 1 290 -19 900 191 0 25 chr2 139963363 139963525 -113293058 + AluJb SINE Alu 132 289 -23 26 0 0 0 chr2 139963755 139963781 -113292802 + AT_rich Low_complexity Low_complexity 1 26 0 214 173 74 37 chr2 139964294 139964375 -113292208 - L2 LINE L2 0 3313 3230 226 279 43 31 chr2 139964914 139965075 -113291508 + L1MEd LINE L1 3 165 -5954 * 660 263 63 41 chr2 139965074 139965555 -113291028 + L1MEd LINE L1 1023 1562 -4748 1772 94 16 23 chr2 139966676 139966932 -113289651 - AluSx SINE Alu -10 302 49 1410 192 89 21 chr2 139966934 139967314 -113289269 - Charlie4a DNA MER1_type -7 501 96 860 300 31 69 chr2 139967966 139968309 -113288274 - L1MEd LINE L1 -4970 1149 843 1876 141 30 3 chr2 139968309 139968606 -113287977 - AluSx SINE Alu -7 305 1 860 300 31 69 chr2 139968606 139968945 -113287638 - L1MEd LINE L1 -5276 843 493 314 281 89 20 chr2 139969012 139969158 -113287425 + HAL1b LINE L1 1172 1327 -21 387 329 11 17 chr2 139969656 139969888 -113286695 + CT-rich Low_complexity Low_complexity 1 230 0 233 220 68 0 chr2 139970034 139970093 -113286490 - L2 LINE L2 0 3272 3210 255 281 123 0 chr2 139971510 139971624 -113284959 - L1ME4a LINE L1 -2 6119 5992 1124 171 11 11 chr2 139971735 139971922 -113284661 + MER5A DNA MER1_type 3 189 0 372 212 36 36 chr2 139972941 139973078 -113283505 - L1ME4a LINE L1 -177 5944 5808 2299 112 3 0 chr2 139973315 139973618 -113282965 + AluSx SINE Alu 1 304 -8 4147 138 19 40 chr2 139973792 139974518 -113282065 + MER50 LTR ERV1 1 711 -23 550 240 115 62 chr2 139974852 139975060 -113281523 - L1ME4a LINE L1 -343 5778 5572 368 99 0 62 chr2 139976249 139976330 -113280253 - MER96B DNA MER1_type? -238 179 104 1541 191 63 61 chr2 139976337 139976766 -113279817 + MLT1C LTR MaLR 6 435 -32 3263 150 136 22 chr2 139976767 139977399 -113279184 + MER44D DNA MER2_type 2 705 0 470 210 50 0 chr2 139977437 139977537 -113279046 + MER96B DNA MER1_type? 313 417 0 421 315 47 7 chr2 139977714 139977990 -113278593 + L1ME4a LINE L1 5647 5933 -188 1497 224 46 41 chr2 139978119 139978641 -113277942 - MLT1E3 LTR MaLR -2 622 3 591 134 10 10 chr2 139979005 139979102 -113277481 + MSTB LTR MaLR 1 97 -329 * 762 69 50 0 chr2 139979101 139979202 -113277381 + MSTB LTR MaLR 264 369 -57 211 367 0 20 chr2 139979267 139979365 -113277218 - MIR SINE MIR -77 131 36 204 327 87 70 chr2 139979396 139979809 -113276774 - L2 LINE L2 -2 3270 2851 433 278 74 19 chr2 139979965 139980127 -113276456 + MER5B DNA MER1_type 8 178 0 2356 109 0 0 chr2 139980735 139981047 -113275536 - AluSq SINE Alu -1 312 1 294 288 49 31 chr2 139981152 139981315 -113275268 + L1MC4 LINE L1 7689 7854 -188 1761 94 16 23 chr2 139981418 139981674 -113274909 - AluSx SINE Alu -10 302 49 1615 174 89 21 chr2 139981676 139982056 -113274527 - Charlie4a DNA MER1_type -7 501 96 978 204 110 57 chr2 139982853 139982988 -113273595 - LTR50 LTR ERVL -1 794 668 1328 194 4 18 chr2 139982988 139983215 -113273368 + MER58A DNA MER1_type 1 224 0 978 204 110 57 chr2 139983215 139983397 -113273186 - LTR50 LTR ERVL -127 668 460 231 329 0 0 chr2 139983646 139983725 -113272858 + MER5B DNA MER1_type 52 130 -48 380 269 11 0 chr2 139983951 139984044 -113272539 + MER5B DNA MER1_type 85 178 0 370 259 179 42 chr2 139984858 139985267 -113271316 - L1ME4a LINE L1 0 6121 5657 295 243 107 50 chr2 139985283 139985423 -113271160 + L2 LINE L2 2919 3066 -206 2297 122 0 0 chr2 139985614 139985926 -113270657 - AluSx SINE Alu 0 312 1 829 118 6 39 chr2 139986251 139986429 -113270154 + (TTCC)n Simple_repeat Simple_repeat 1 172 0 1693 183 3 7 chr2 139986429 139986714 -113269869 - AluJb SINE Alu -28 284 1 304 207 0 0 chr2 139986723 139986781 -113269802 - L2 LINE L2 0 3313 3256 199 317 0 0 chr2 139986916 139986957 -113269626 - L2 LINE L2 -87 3185 3145 2928 130 16 5 chr2 139987320 139987758 -113268825 - MER65A LTR ERV1 0 445 3 290 156 0 0 chr2 139987995 139988040 -113268543 - L2 LINE L2 -223 3049 3005 2155 103 0 3 chr2 139988263 139988577 -113268006 + AluSg SINE Alu 1 313 0 1090 271 107 46 chr2 139988782 139988876 -113267707 - L1MC4 LINE L1 -2 8040 7953 1565 183 69 0 chr2 139988876 139989165 -113267418 - AluJo SINE Alu -3 309 1 1090 271 107 46 chr2 139989165 139989661 -113266922 - L1MC4 LINE L1 -89 7953 7414 * 2714 251 30 51 chr2 139989657 139989940 -113266643 - L1ME2 LINE L1 -12 6152 5864 2216 107 3 3 chr2 139989940 139990239 -113266344 - AluSq SINE Alu -14 299 1 2714 251 30 51 chr2 139990239 139991002 -113265581 - L1ME2 LINE L1 -300 5864 5130 251 275 58 0 chr2 139991017 139991086 -113265497 - L1ME2 LINE L1 -1124 5022 4950 364 379 108 21 chr2 139991574 139992007 -113264576 + L2 LINE L2 2194 2664 -650 2161 108 10 10 chr2 139992048 139992345 -113264238 + AluSx SINE Alu 1 297 -15 206 118 44 162 chr2 139992604 139992672 -113263911 + MER91C DNA MER1_type 49 108 -32 1955 155 10 0 chr2 139993447 139993751 -113262832 - AluJo SINE Alu -5 307 1 241 233 151 25 chr2 139994213 139994372 -113262211 - L1ME4a LINE L1 -16 6105 5927 1807 220 36 21 chr2 139994392 139994779 -113261804 + MSTD LTR MaLR 4 396 0 783 202 169 21 chr2 139994902 139995145 -113261438 + MER2 DNA MER2_type 67 345 0 342 167 17 3 chr2 139995382 139995457 -113261126 + AluS SINE Alu 5 62 -241 462 276 70 6 chr2 139995914 139996070 -113260513 + MIR3 SINE MIR 43 208 0 521 281 138 13 chr2 139996222 139996446 -113260137 + LTR16A LTR ERVL 194 445 -5 275 325 119 24 chr2 139996504 139996630 -113259953 - MIR3 SINE MIR -50 158 21 199 311 22 0 chr2 139996873 139996918 -113259665 + MIR SINE MIR 30 75 -133 541 174 26 9 chr2 139997037 139997152 -113259431 + L1MD2 LINE L1 6233 6349 -10 260 253 92 35 chr2 139997511 139997598 -113258985 - MIR SINE MIR -55 153 62 487 238 127 0 chr2 139998253 139998379 -113258204 - L1ME3 LINE L1 -1 6161 6020 817 169 8 0 chr2 139999907 140000031 -113256552 - FLAM_C SINE Alu -17 126 2 26 30 0 0 chr2 140000032 140000065 -113256518 + AT_rich Low_complexity Low_complexity 1 33 0 233 253 74 21 chr2 140000072 140000167 -113256416 - L1ME4a LINE L1 -99 6022 5923 732 316 25 44 chr2 140000286 140000606 -113255977 - LTR16C LTR ERVL -19 472 159 1978 344 52 12 chr2 140001113 140002459 -113254124 - ERVL LTR ERVL -597 4888 3663 384 274 62 9 chr2 140002477 140002590 -113253993 - ERVL LTR ERVL -2455 3199 3081 435 283 50 44 chr2 140002938 140003118 -113253465 - LTR16C LTR ERVL -14 477 297 947 224 122 32 chr2 140003121 140003433 -113253150 - MLT1D LTR MaLR 0 505 166 5585 207 47 30 chr2 140003435 140004058 -113252525 + L1MC1 LINE L1 1802 2413 -4013 1720 197 7 0 chr2 140004058 140004353 -113252230 + AluJo SINE Alu 1 297 -15 5585 207 47 30 chr2 140004353 140004443 -113252140 + L1MC1 LINE L1 2413 2500 -3926 1999 152 149 11 chr2 140004443 140004819 -113251764 - MSTA LTR MaLR 0 428 1 9918 143 6 60 chr2 140004819 140006487 -113250096 - MSTA-int LTR MaLR 0 1580 3 2256 133 125 8 chr2 140006488 140006871 -113249712 - MSTA LTR MaLR 0 428 1 5585 207 47 30 chr2 140006871 140008484 -113248099 + L1MC1 LINE L1 2499 4167 -2259 44190 46 1 0 chr2 140008486 140014611 -113241972 + L1PA4 LINE L1 26 6155 0 6136 185 28 33 chr2 140014624 140015612 -113240971 + L1MC1 LINE L1 4156 5147 -1466 1856 166 28 0 chr2 140015612 140015901 -113240682 + AluJb SINE Alu 1 297 -15 6136 185 28 33 chr2 140015901 140017371 -113239212 + L1MC1 LINE L1 5147 6604 -9 719 225 40 17 chr2 140017376 140017549 -113239034 - MLT1D LTR MaLR -328 177 1 4884 141 16 67 chr2 140017851 140017885 -113238698 + L1MB3 LINE L1 5108 5142 -1041 2589 98 91 15 chr2 140017885 140018283 -113238300 - MSTA LTR MaLR 0 428 1 4884 141 16 67 chr2 140018283 140018428 -113238155 + L1MB3 LINE L1 5142 5293 -890 2302 168 54 0 chr2 140018428 140018798 -113237785 - MLT1B LTR MaLR 0 390 1 4884 141 16 67 chr2 140018798 140019254 -113237329 + L1MB3 LINE L1 5293 5651 -532 2426 87 0 0 chr2 140019254 140019554 -113237029 + AluY SINE Alu 1 300 -11 4884 141 16 67 chr2 140019554 140020060 -113236523 + L1MB3 LINE L1 5651 6181 -2 2031 157 47 17 chr2 140020116 140020740 -113235843 - MER4D LTR ERV1 -5 898 1 1456 147 17 4 chr2 140020842 140021073 -113235510 + AluJo SINE Alu 64 297 -15 31 0 0 0 chr2 140021102 140021133 -113235450 + AT_rich Low_complexity Low_complexity 1 31 0 314 275 118 14 chr2 140021189 140021367 -113235216 - L1MC4a LINE L1 -297 5824 5662 476 159 106 44 chr2 140022763 140022876 -113233707 + L2 LINE L2 3193 3312 -1 332 242 39 112 chr2 140023396 140023574 -113233009 + L2 LINE L2 2586 2750 -564 420 20 0 0 chr2 140023689 140023738 -113232845 + (CA)n Simple_repeat Simple_repeat 1 49 0 2667 175 15 7 chr2 140023966 140024424 -113232159 - L1PA15 LINE L1 -2 6163 5702 761 149 0 0 chr2 140024484 140024605 -113231978 - L1PA15 LINE L1 -476 5689 5569 749 324 43 8 chr2 140024734 140024987 -113231596 + MIR SINE MIR 1 262 0 251 220 0 0 chr2 140025084 140025134 -113231449 + MIR SINE MIR 44 93 -115 258 227 0 0 chr2 140025234 140025309 -113231274 + (TA)n Simple_repeat Simple_repeat 2 76 0 283 224 26 13 chr2 140025365 140025441 -113231142 - L2 LINE L2 -655 2659 2583 185 56 0 56 chr2 140025446 140025482 -113231101 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 1589 87 24 0 chr2 140025483 140025689 -113230894 - L1PA10 LINE L1 -19 6149 5939 21 0 0 0 chr2 140025723 140025744 -113230839 + AT_rich Low_complexity Low_complexity 1 21 0 195 172 65 6 chr2 140025789 140025958 -113230625 + (TA)n Simple_repeat Simple_repeat 1 179 0 24333 55 1 9 chr2 140025975 140029066 -113227517 + L1P LINE L1 1 3115 -3031 279 0 0 0 chr2 140029066 140029097 -113227486 + (TCTCCC)n Simple_repeat Simple_repeat 1 31 0 6751 69 7 14 chr2 140029098 140030624 -113225959 + SVA Other Other 68 1382 -911 24333 55 1 9 chr2 140030624 140032490 -113224093 + L1P LINE L1 3114 4921 -1225 7724 29 0 0 chr2 140032490 140033512 -113223071 + L1PA4 LINE L1 5175 6196 0 30 0 0 0 chr2 140033512 140033542 -113223041 + AT_rich Low_complexity Low_complexity 1 30 0 540 196 0 0 chr2 140034369 140034647 -113221936 + AluSg/x SINE Alu 213 490 0 1984 130 7 0 chr2 140034919 140035212 -113221371 + AluSx SINE Alu 1 295 -17 409 95 48 16 chr2 140035430 140035493 -113221090 + MLT1A2 LTR MaLR 1 65 -309 615 226 26 0 chr2 140035498 140035613 -113220970 - Tigger3(Golem) DNA MER2_type 0 3029 2912 308 274 41 0 chr2 140035621 140035694 -113220889 - Tigger3(Golem) DNA MER2_type -2953 76 1 * 1413 181 3 91 chr2 140035694 140036024 -113220559 + MLT1A2 LTR MaLR 69 369 -5 298 242 40 20 chr2 140036436 140036535 -113220048 - L1ME4a LINE L1 -8 6113 6013 390 21 0 0 chr2 140036554 140036601 -113219982 + (TG)n Simple_repeat Simple_repeat 2 48 0 231 36 0 0 chr2 140036620 140036648 -113219935 + (TA)n Simple_repeat Simple_repeat 2 29 0 265 333 111 21 chr2 140036785 140036929 -113219654 + L3b LINE CR1 1321 1477 -106 1817 126 0 58 chr2 140037479 140037789 -113218794 - AluSx SINE Alu -20 292 1 242 327 73 0 chr2 140037909 140038019 -113218564 - L1ME4a LINE L1 -367 5803 5686 604 168 0 0 chr2 140039628 140039775 -113216808 - AluJb SINE Alu 0 344 198 205 318 119 8 chr2 140039924 140040050 -113216533 - L3b LINE CR1 -88 1495 1356 312 222 12 0 chr2 140040432 140040513 -113216070 - MLT1I LTR MaLR -267 142 61 1127 108 0 0 chr2 140040686 140040844 -113215739 + L1PA16 LINE L1 5631 5788 -378 741 112 0 0 chr2 140040844 140040935 -113215648 + MSTA LTR MaLR 1 91 -337 7830 164 178 25 chr2 140040935 140042455 -113214128 - MER52A LTR ERV1 -2 1753 1 1726 139 135 7 chr2 140042455 140042758 -113213825 + MSTA LTR MaLR 86 427 -1 2503 114 11 13 chr2 140042758 140043134 -113213449 + L1PA16 LINE L1 5783 6157 -9 30 0 0 0 chr2 140043134 140043164 -113213419 + AT_rich Low_complexity Low_complexity 1 30 0 1829 105 69 4 chr2 140043170 140043447 -113213136 + AluSq SINE Alu 1 295 -18 517 329 48 19 chr2 140043451 140043658 -113212925 + MIR SINE MIR 48 260 -2 201 311 87 66 chr2 140043798 140044039 -113212544 - L2 LINE L2 -191 3081 2836 225 225 25 142 chr2 140044289 140044409 -113212174 - L2 LINE L2 -8 3264 3159 1414 219 60 60 chr2 140045423 140045926 -113210657 - MLT1D LTR MaLR -2 503 1 3850 167 30 3 chr2 140047607 140048301 -113208282 - L1MC1 LINE L1 -1 6332 5620 254 186 136 0 chr2 140048327 140048386 -113208197 - L1MC/D LINE L1 -1901 5907 5841 428 305 69 29 chr2 140048660 140048834 -113207749 + MIR SINE MIR 20 200 -62 323 303 118 13 chr2 140048877 140049115 -113207468 - L2 LINE L2 0 3313 3051 2004 113 0 29 chr2 140050496 140050807 -113205776 + AluSx SINE Alu 1 302 -10 1024 198 5 14 chr2 140050818 140051035 -113205548 + L1MB7 LINE L1 5961 6175 -9 483 235 0 0 chr2 140051089 140051191 -113205392 + MLT1F LTR MaLR 1 102 -465 1173 206 73 0 chr2 140051216 140051464 -113205119 + AluJo SINE Alu 1 266 -46 2050 61 29 14 chr2 140051493 140051800 -113204783 + AluY SINE Alu 1 311 0 1857 171 72 14 chr2 140051841 140052204 -113204379 + MLT1F LTR MaLR 152 535 -7 2559 220 32 16 chr2 140053376 140053751 -113202832 + MER119 DNA MER1_type 7 397 -186 1861 102 7 41 chr2 140053751 140054081 -113202502 + AluSx SINE Alu 1 320 0 2559 220 32 16 chr2 140054081 140054272 -113202311 + MER119 DNA MER1_type 397 583 0 238 355 26 13 chr2 140054483 140054559 -113202024 + L2 LINE L2 3102 3178 -94 216 0 0 0 chr2 140054923 140054947 -113201636 + (TTGTG)n Simple_repeat Simple_repeat 4 27 0 2676 13 0 3 chr2 140056182 140056492 -113200091 - AluY SINE Alu -2 309 1 279 372 78 22 chr2 140056532 140056903 -113199680 + L2 LINE L2 1611 2002 -1312 700 254 12 12 chr2 140056924 140057097 -113199486 - MER5A DNA MER1_type -2 187 15 726 173 106 115 chr2 140057111 140057319 -113199264 + MER20 DNA MER1_type 14 219 0 1605 169 3 34 chr2 140057524 140057844 -113198739 - AluJo SINE Alu -2 310 1 386 304 36 41 chr2 140058097 140058291 -113198292 + L2 LINE L2 2914 3106 -166 1046 232 33 12 chr2 140058350 140058591 -113197992 + MIR SINE MIR 17 262 0 240 339 210 0 chr2 140058588 140058712 -113197871 + L2 LINE L2 3115 3264 -8 * 194 255 39 0 chr2 140058756 140058807 -113197776 - L2 LINE L2 0 3272 3220 1912 119 6 19 chr2 140058877 140059188 -113197395 + AluSx SINE Alu 1 307 -5 688 189 6 69 chr2 140059608 140059783 -113196800 + MER103 DNA DNA 1 164 -2 896 304 43 25 chr2 140060528 140060926 -113195657 - MLT1I LTR MaLR -2 407 3 359 341 56 17 chr2 140061053 140061232 -113195351 + MIR3 SINE MIR 21 206 -2 2245 86 0 29 chr2 140061913 140062227 -113194356 - AluSg SINE Alu -5 305 1 335 331 66 80 chr2 140062248 140062686 -113193897 - L2 LINE L2 -4 3268 2837 418 261 111 40 chr2 140062807 140063006 -113193577 - LTR33 LTR ERVL 0 521 309 293 299 104 22 chr2 140063040 140063174 -113193409 - LTR33 LTR ERVL -300 221 77 473 135 0 0 chr2 140063384 140063458 -113193125 - MER92C LTR ERV1 0 554 481 695 220 0 71 chr2 140063505 140063673 -113192910 - MER92B LTR ERV1 -476 160 5 474 235 31 37 chr2 140064553 140064715 -113191868 - LTR37A LTR ERV1 -265 161 1 2712 232 12 48 chr2 140064716 140065522 -113191061 - LTR49-int LTR ERV1 -687 4249 3473 1919 106 3 34 chr2 140065541 140065834 -113190749 + AluSg SINE Alu 11 294 -16 658 242 30 122 chr2 140065863 140066198 -113190385 - LTR49-int LTR ERV1 -1563 4768 4465 260 35 0 0 chr2 140066221 140066250 -113190333 + MER31-int LTR ERV1 4341 4369 -567 2101 122 0 0 chr2 140066501 140066797 -113189786 + AluSx SINE Alu 1 296 -16 192 337 34 22 chr2 140066901 140066990 -113189593 - MER5B DNA MER1_type -88 90 1 1486 220 22 103 chr2 140067136 140068078 -113188505 - LTR49-int LTR ERV1 -1870 3066 2211 766 189 60 84 chr2 140068180 140068381 -113188202 - LTR49-int LTR ERV1 -3654 1282 1087 1844 151 14 0 chr2 140068381 140068672 -113187911 + AluJb SINE Alu 4 298 -14 766 189 60 84 chr2 140068672 140068719 -113187864 - LTR49-int LTR ERV1 -3849 1087 1040 332 182 0 0 chr2 140069071 140069137 -113187446 - MER92C LTR ERV1 -2 552 487 426 182 27 158 chr2 140069202 140069381 -113187202 - MER92B LTR ERV1 -392 162 3 2008 115 3 3 chr2 140069499 140069794 -113186789 - AluSx SINE Alu -17 295 1 434 275 153 16 chr2 140070130 140070319 -113186264 + MIR SINE MIR 19 233 -29 3773 61 4 0 chr2 140070876 140071351 -113185232 + L1PA8 LINE L1 5687 6163 -9 430 202 77 10 chr2 140072045 140072149 -113184434 + MER112 DNA MER1_type 5 115 -145 * 448 187 9 75 chr2 140072128 140072235 -113184348 + MER63A DNA MER1_type 76 175 -35 207 0 0 0 chr2 140072249 140072272 -113184311 + (CA)n Simple_repeat Simple_repeat 2 24 0 2078 105 3 0 chr2 140072515 140072810 -113183773 - AluSg SINE Alu -14 296 1 298 183 7 0 chr2 140073056 140073120 -113183463 - MLT1G LTR MaLR -13 577 470 225 179 0 0 chr2 140073334 140073373 -113183210 - MLT1H LTR MaLR -374 175 137 1799 176 144 44 chr2 140073458 140073917 -113182666 + MLT1D LTR MaLR 1 505 0 668 174 121 0 chr2 140073917 140074121 -113182462 + MLT1D-int LTR MaLR 1 362 -1009 4816 126 68 51 chr2 140074121 140075564 -113181019 - pTR5 LTR ERV1 0 2438 49 829 177 0 0 chr2 140075700 140075824 -113180759 - FLAM_C SINE Alu -18 125 2 1799 223 50 121 chr2 140075894 140076158 -113180425 + MLT1D-int LTR MaLR 659 940 -795 1998 141 3 3 chr2 140076158 140076470 -113180113 + AluSx SINE Alu 1 312 0 1799 223 50 121 chr2 140076470 140076556 -113180027 + MLT1D-int LTR MaLR 940 1031 -704 2795 3 0 0 chr2 140076556 140076864 -113179719 + AluYa5 SINE Alu 1 308 -3 1799 223 50 121 chr2 140076864 140077299 -113179284 + MLT1D-int LTR MaLR 1031 1734 -1 1655 219 93 30 chr2 140077301 140077489 -113179094 + MLT1D LTR MaLR 2 177 -328 1914 126 7 17 chr2 140077489 140077791 -113178792 + AluSg SINE Alu 1 299 -11 1655 219 93 30 chr2 140077791 140077834 -113178749 + MLT1D LTR MaLR 177 216 -289 2010 110 17 0 chr2 140077834 140078124 -113178459 + AluSx SINE Alu 1 295 -17 1655 219 93 30 chr2 140078124 140078365 -113178218 + MLT1D LTR MaLR 216 505 0 548 256 96 73 chr2 140079050 140079426 -113177157 - MLT1L LTR MaLR -3 508 204 413 290 50 85 chr2 140079644 140079844 -113176739 - ERVL LTR ERVL -4314 1450 1258 889 247 54 0 chr2 140079884 140080107 -113176476 + MIR SINE MIR 7 241 -21 445 328 20 5 chr2 140080152 140080353 -113176230 - ERVL LTR ERVL -4561 1203 1000 1827 130 0 8 chr2 140080910 140081164 -113175419 + AluSc SINE Alu 1 252 -57 845 87 0 0 chr2 140081265 140081368 -113175215 - AluY SINE Alu -208 103 1 248 226 0 0 chr2 140081607 140081660 -113174923 - LTR67 LTR ERVL 0 557 505 1574 165 0 11 chr2 140081662 140081923 -113174660 + AluJo SINE Alu 55 312 0 348 328 81 53 chr2 140082416 140082663 -113173920 + MIR SINE MIR 3 256 -6 180 333 0 0 chr2 140083908 140083953 -113172630 + MIR3 SINE MIR 129 173 -35 385 257 169 0 chr2 140084447 140084595 -113171988 - MIR SINE MIR -23 239 67 21 0 0 0 chr2 140085161 140085182 -113171401 + GC_rich Low_complexity Low_complexity 1 21 0 35 54 0 0 chr2 140085209 140085265 -113171318 + GC_rich Low_complexity Low_complexity 1 56 0 2353 88 3 0 chr2 140087196 140087490 -113169093 - AluSq SINE Alu -18 295 1 205 176 0 162 chr2 140088152 140088220 -113168363 - L3 LINE CR1 -11 1566 1510 218 288 17 0 chr2 140089154 140089213 -113167370 - L2 LINE L2 -13 3259 3200 27 0 0 0 chr2 140090045 140090072 -113166511 + AT_rich Low_complexity Low_complexity 1 27 0 630 306 42 10 chr2 140090259 140090452 -113166131 - MIR SINE MIR -39 223 25 346 233 78 29 chr2 140090570 140090673 -113165910 - MIR SINE MIR -59 149 42 214 355 43 11 chr2 140091418 140091511 -113165072 + MIR3 SINE MIR 108 203 -5 896 149 0 8 chr2 140093173 140093378 -113163205 + FLAM_C SINE Alu 1 204 0 1655 165 0 76 chr2 140093640 140093968 -113162615 - AluJo SINE Alu -7 305 3 1556 191 97 32 chr2 140094106 140094571 -113162012 - MLT1D LTR MaLR -10 495 1 1556 177 81 29 chr2 140094853 140095299 -113161284 + pTR5 LTR ERV1 741 1209 -1229 214 281 0 0 chr2 140095300 140095364 -113161219 + (CACCG)n Simple_repeat Simple_repeat 1 64 0 2535 147 48 4 chr2 140095639 140096094 -113160489 - LTR26E LTR ERV1 -147 475 1 537 266 208 0 chr2 140096578 140096819 -113159764 + MER20B DNA MER1_type 35 325 -458 757 250 52 26 chr2 140096899 140097207 -113159376 + MER20B DNA MER1_type 463 778 -5 401 229 131 8 chr2 140097517 140097639 -113158944 + MIR SINE MIR 2 138 -124 2538 103 264 175 chr2 140097650 140098650 -113157933 - pTR5 LTR ERV1 -2 2436 1223 207 170 0 0 chr2 140098686 140098733 -113157850 + (GTGTG)n Simple_repeat Simple_repeat 5 51 0 931 124 0 0 chr2 140098966 140099087 -113157496 + AluJb SINE Alu 1 121 -191 444 19 0 0 chr2 140099096 140099149 -113157434 + (CA)n Simple_repeat Simple_repeat 2 54 0 2259 125 0 7 chr2 140100564 140100869 -113155714 - AluSx SINE Alu -9 303 1 190 306 16 16 chr2 140101149 140101211 -113155372 - MIR SINE MIR 0 262 201 1049 157 41 13 chr2 140101215 140101445 -113155138 - L1MD3 LINE L1 0 7785 7544 275 125 0 0 chr2 140102306 140102346 -113154237 + MER5A DNA MER1_type 146 185 -4 588 290 65 42 chr2 140102515 140102915 -113153668 - L2 LINE L2 -93 3220 2812 526 250 143 27 chr2 140102992 140103216 -113153367 - MIR SINE MIR 0 262 13 354 295 173 6 chr2 140103256 140103412 -113153171 - L2 LINE L2 -594 2720 2539 21 0 0 0 chr2 140104579 140104600 -113151983 + AT_rich Low_complexity Low_complexity 1 21 0 2220 75 0 0 chr2 140105046 140105311 -113151272 + AluSc SINE Alu 43 307 -2 1620 207 34 38 chr2 140105554 140105877 -113150706 + Charlie4a DNA MER1_type 34 356 -1605 2083 117 3 10 chr2 140105877 140106201 -113150382 + AluSx SINE Alu 1 312 0 1620 207 34 38 chr2 140106201 140106322 -113150261 + Charlie4a DNA MER1_type 356 476 -32 787 164 47 35 chr2 140107583 140107754 -113148829 - FRAM SINE Alu -11 165 1 584 177 177 0 chr2 140108383 140108496 -113148087 + MER94 DNA DNA 2 134 0 225 322 35 11 chr2 140110025 140110112 -113146471 + MIR3 SINE MIR 110 198 -10 644 264 21 102 chr2 140110279 140110514 -113146069 - MIR SINE MIR -24 238 23 1394 226 66 26 chr2 140110532 140110909 -113145674 + MSTD LTR MaLR 1 392 -4 182 341 107 39 chr2 140111030 140111235 -113145348 + MIR SINE MIR 43 261 -1 911 144 67 17 chr2 140111806 140111986 -113144597 + MER5A DNA MER1_type 1 189 0 244 247 171 34 chr2 140113335 140113481 -113143102 - MIR SINE MIR -2 260 95 2495 65 0 0 chr2 140113592 140113885 -113142698 - AluY SINE Alu -18 293 1 793 225 84 0 chr2 140114164 140114355 -113142228 - MER3 DNA MER1_type -2 207 1 289 83 0 33 chr2 140114476 140114536 -113142047 + (TTTTG)n Simple_repeat Simple_repeat 2 59 0 686 179 9 0 chr2 140114539 140114651 -113141932 - FAM SINE Alu -28 157 45 563 284 45 0 chr2 140116496 140116651 -113139932 + MIR SINE MIR 95 256 -6 530 273 75 40 chr2 140116690 140116943 -113139640 + MIR SINE MIR 1 262 0 2056 133 10 7 chr2 140117169 140117470 -113139113 - AluSx SINE Alu -10 302 1 456 234 81 0 chr2 140118545 140118669 -113137914 - MIR SINE MIR -79 183 50 2257 92 23 7 chr2 140118913 140119219 -113137364 + AluY SINE Alu 1 311 0 978 142 51 62 chr2 140119646 140119822 -113136761 - AluSx SINE Alu -138 174 1 2243 103 0 50 chr2 140120264 140120584 -113135999 + AluSx SINE Alu 1 304 -8 562 270 105 27 chr2 140123414 140123710 -113132873 + LTR33 LTR ERVL 75 393 -128 295 232 49 0 chr2 140124201 140124283 -113132300 - MIR SINE MIR -83 179 94 2191 102 13 20 chr2 140124419 140124724 -113131859 + AluSx SINE Alu 1 303 -9 605 222 90 24 chr2 140125048 140125215 -113131368 - MER5B DNA MER1_type 0 178 1 1526 214 100 7 chr2 140125262 140125683 -113130900 - Charlie4a DNA MER1_type -7 501 42 219 69 0 0 chr2 140125859 140125888 -113130695 + (T)n Simple_repeat Simple_repeat 1 29 0 1962 149 0 7 chr2 140126913 140127208 -113129375 - AluJo SINE Alu -19 293 1 523 277 92 19 chr2 140127642 140127848 -113128735 - MIR SINE MIR -22 240 20 2344 99 0 0 chr2 140127926 140128219 -113128364 - AluY SINE Alu -18 293 1 303 96 0 0 chr2 140128238 140128290 -113128293 + (CA)n Simple_repeat Simple_repeat 2 53 0 315 215 37 37 chr2 140128682 140128817 -113127766 - Charlie7 DNA MER1_type 0 2612 2478 264 221 42 32 chr2 140128794 140128889 -113127694 - Charlie7 DNA MER1_type -2470 142 47 * 2857 125 14 2 chr2 140128919 140129342 -113127241 + MSTA LTR MaLR 1 428 0 855 197 61 61 chr2 140130114 140130378 -113126205 - L1MB5 LINE L1 0 6174 5911 783 186 0 0 chr2 140130565 140130683 -113125900 + FLAM_C SINE Alu 1 118 -15 476 247 69 52 chr2 140130848 140131060 -113125523 + MIR SINE MIR 41 261 -1 2386 78 0 13 chr2 140132650 140132957 -113123626 - AluY SINE Alu -8 303 1 2268 112 0 7 chr2 140136562 140136867 -113119716 + AluSg SINE Alu 1 303 -7 652 216 130 10 chr2 140136887 140137095 -113119488 - MER5C DNA MER1_type -91 233 1 527 211 88 29 chr2 140137650 140137821 -113118762 - MLT1J1 LTR MaLR -251 195 15 180 0 0 0 chr2 140138343 140138363 -113118220 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 416 261 139 6 chr2 140138502 140138667 -113117916 - LTR33A LTR ERVL -17 506 320 549 223 96 35 chr2 140138712 140138909 -113117674 - LTR33A LTR ERVL -314 209 1 216 233 233 12 chr2 140139113 140139199 -113117384 - MIR SINE MIR -2 260 156 2838 195 62 29 chr2 140139200 140139815 -113116768 - MER82 DNA MER2_type -1 652 18 212 287 188 0 chr2 140139850 140139951 -113116632 - MIR SINE MIR -135 127 8 3594 157 41 3 chr2 140139997 140140609 -113115974 + MER41B LTR ERV1 1 635 0 292 295 93 31 chr2 140140728 140140857 -113115726 - MIR SINE MIR -60 202 66 866 169 149 26 chr2 140141409 140141604 -113114979 + MER20 DNA MER1_type 1 219 0 2534 209 95 53 chr2 140141721 140142535 -113114048 + MER97a DNA MER1_type? 14 861 -33 805 203 54 83 chr2 140142765 140143041 -113113542 - L1ME3A LINE L1 -1 6169 5902 2584 55 0 13 chr2 140143052 140143361 -113113222 - AluY SINE Alu -6 305 1 234 171 73 61 chr2 140144758 140144840 -113111743 - L1PA15-16 LINE L1 -4842 2007 1925 281 288 0 0 chr2 140144875 140144948 -113111635 + L2 LINE L2 3230 3302 -11 681 125 19 0 chr2 140145183 140145287 -113111296 - L1PB2 LINE L1 -3 6148 6043 315 234 0 26 chr2 140145287 140145355 -113111228 + L1MA4 LINE L1 5870 5937 -363 * 1267 96 6 0 chr2 140145289 140145466 -113111117 + L1PB2 LINE L1 5872 6049 -102 606 283 209 19 chr2 140147029 140147679 -113108904 - L2 LINE L2 0 3313 2544 231 263 0 0 chr2 140147703 140147760 -113108823 + L2 LINE L2 2828 2884 -430 394 302 54 27 chr2 140147865 140148014 -113108569 + L2 LINE L2 3161 3313 0 720 237 89 34 chr2 140148585 140148821 -113107762 + MIR SINE MIR 14 262 0 1337 256 76 66 chr2 140148958 140149551 -113107032 - MER21B LTR ERV1 -124 739 141 2349 108 0 0 chr2 140149864 140150171 -113106412 - AluSc SINE Alu -2 307 1 1756 151 17 17 chr2 140150921 140151220 -113105363 - AluJb SINE Alu -13 299 1 443 192 0 0 chr2 140151235 140151313 -113105270 - FLAM SINE Alu -19 124 47 183 171 0 0 chr2 140151390 140151425 -113105158 + MIR SINE MIR 219 253 -9 908 195 31 10 chr2 140151528 140151723 -113104860 + MSTD LTR MaLR 1 199 -197 189 0 0 0 chr2 140151782 140151803 -113104780 + (TCC)n Simple_repeat Simple_repeat 3 23 0 189 0 0 0 chr2 140152003 140152024 -113104559 + (TCC)n Simple_repeat Simple_repeat 3 23 0 744 228 54 66 chr2 140152471 140152712 -113103871 + MSTD LTR MaLR 159 396 0 180 0 0 0 chr2 140152938 140152958 -113103625 + (TTTTTA)n Simple_repeat Simple_repeat 5 24 0 1462 208 32 0 chr2 140153380 140153664 -113102919 - AluJo SINE Alu -2 310 18 477 0 0 0 chr2 140153939 140153992 -113102591 + (TG)n Simple_repeat Simple_repeat 2 54 0 223 301 65 0 chr2 140156131 140156224 -113100359 + MIR SINE MIR 24 122 -86 1041 116 172 15 chr2 140156921 140157119 -113099464 - MER30 DNA MER1_type 0 230 2 207 184 41 0 chr2 140157296 140157345 -113099238 - L2 LINE L2 -1 3312 3262 427 247 167 29 chr2 140157913 140158087 -113098496 - MLT1J LTR MaLR 0 511 314 393 318 68 0 chr2 140160863 140160995 -113095588 - L2 LINE L2 0 3313 3173 1203 169 0 29 chr2 140161001 140161208 -113095375 + AluJb SINE Alu 2 202 -110 703 100 55 18 chr2 140161208 140161318 -113095265 - FRAM SINE Alu -38 138 25 1296 225 112 58 chr2 140162837 140163357 -113093226 - MLT1H LTR MaLR -1 548 1 524 204 74 0 chr2 140164057 140164165 -113092418 + MER119 DNA MER1_type 8 123 -460 416 213 63 47 chr2 140164176 140164303 -113092280 + MER119 DNA MER1_type 455 583 0 314 287 109 50 chr2 140164322 140164524 -113092059 + MIR SINE MIR 49 262 0 4992 78 33 60 chr2 140165585 140165970 -113090613 - MER4E LTR ERV1 0 766 411 195 42 0 0 chr2 140165970 140165994 -113090589 + (GA)n Simple_repeat Simple_repeat 2 25 0 4992 78 33 60 chr2 140165994 140166395 -113090188 - MER4E LTR ERV1 -355 411 1 22 35 0 0 chr2 140166977 140167006 -113089577 + AT_rich Low_complexity Low_complexity 1 29 0 7976 128 83 12 chr2 140167223 140168616 -113087967 - MER4E-int LTR ERV1 -113 6645 5154 2132 121 13 3 chr2 140169307 140169614 -113086969 + AluJb SINE Alu 1 310 -2 364 181 149 0 chr2 140169765 140169859 -113086724 + MER5A DNA MER1_type 6 113 -76 599 249 100 48 chr2 140171329 140171558 -113085025 - MER102b DNA MER1_type -12 329 89 971 158 41 6 chr2 140172999 140173170 -113083413 + LTR41 LTR ERVL 3 179 -594 974 205 156 102 chr2 140173235 140173645 -113082938 + LTR41 LTR ERVL 342 773 0 1055 227 122 0 chr2 140173721 140174056 -113082527 + LTR37A LTR ERV1 50 425 -1 3258 186 84 32 chr2 140174248 140174528 -113082055 + L1MB8 LINE L1 5207 5471 -707 1619 103 82 31 chr2 140174528 140174573 -113082010 + L1MA5A LINE L1 5988 6029 -268 2304 127 18 0 chr2 140174573 140174904 -113081679 - MER1B DNA MER1_type 0 337 1 1619 103 82 31 chr2 140174904 140175150 -113081433 + L1MA5A LINE L1 6029 6294 -3 3258 186 84 32 chr2 140175150 140175338 -113081245 + L1MB8 LINE L1 5471 5648 -530 180 0 0 0 chr2 140175338 140175358 -113081225 + (CA)n Simple_repeat Simple_repeat 2 21 0 3258 186 84 32 chr2 140175358 140175698 -113080885 + L1MB8 LINE L1 5648 6059 -119 513 218 0 0 chr2 140175706 140175793 -113080790 + 5S rRNA rRNA 2 88 -33 557 164 31 8 chr2 140175793 140175921 -113080662 + L1MB8 LINE L1 6048 6178 0 318 296 30 94 chr2 140176492 140176759 -113079824 + L2 LINE L2 2364 2613 -701 307 214 218 5 chr2 140177041 140177221 -113079362 - L1MD2 LINE L1 -2 7806 6198 540 277 60 40 chr2 140179471 140179720 -113076863 + Charlie8 DNA MER1_type 27 280 -2137 349 317 54 24 chr2 140179795 140179962 -113076621 + MER5B DNA MER1_type 1 172 -6 2199 82 142 6 chr2 140180898 140181228 -113075355 + THE1C LTR MaLR 1 375 0 303 93 0 0 chr2 140181632 140181675 -113074908 + (TG)n Simple_repeat Simple_repeat 1 43 0 423 68 0 0 chr2 140182133 140182192 -113074391 - Alu SINE Alu -11 298 240 417 77 0 0 chr2 140182191 140182256 -113074327 - Alu SINE Alu -4 306 242 * 2420 98 0 0 chr2 140182256 140182562 -113074021 - AluSg SINE Alu -4 306 1 428 287 61 12 chr2 140182659 140182823 -113073760 + MIR SINE MIR 21 192 -70 2163 125 3 10 chr2 140183175 140183488 -113073095 + AluSq SINE Alu 1 311 -2 2206 113 0 3 chr2 140183504 140183813 -113072770 - AluY SINE Alu -3 308 1 495 210 108 67 chr2 140184066 140184261 -113072322 - MLT1D LTR MaLR -302 203 1 21 0 0 0 chr2 140185069 140185090 -113071493 + AT_rich Low_complexity Low_complexity 1 21 0 259 350 0 0 chr2 140187138 140187241 -113069342 - MER5A DNA MER1_type -86 103 1 589 249 12 30 chr2 140187656 140187825 -113068758 + MER5B DNA MER1_type 6 171 -7 650 174 67 96 chr2 140189281 140189459 -113067124 + MER20 DNA MER1_type 43 215 -4 2355 50 11 0 chr2 140189540 140189823 -113066760 - AluY SINE Alu -25 286 1 180 0 0 0 chr2 140190682 140190702 -113065881 + (A)n Simple_repeat Simple_repeat 1 20 0 201 39 0 0 chr2 140191874 140191900 -113064683 + (A)n Simple_repeat Simple_repeat 1 26 0 3705 172 38 42 chr2 140193733 140194541 -113062042 - L1MB8 LINE L1 0 6178 5374 2358 155 78 8 chr2 140196134 140196606 -113059977 - L1MA6 LINE L1 -5 6295 5791 770 201 63 0 chr2 140196985 140197159 -113059424 - MER5A DNA MER1_type -4 185 1 436 241 0 0 chr2 140197170 140197257 -113059326 - MER58 DNA MER1_type -1 2419 128 272 279 52 70 chr2 140197394 140197566 -113059017 + MIR SINE MIR 65 233 -29 321 289 45 19 chr2 140200584 140200740 -113055843 - L1ME4a LINE L1 -27 6094 5935 303 180 16 0 chr2 140200749 140200810 -113055773 - L1MCa LINE L1 -4359 2067 2006 189 107 0 0 chr2 140201224 140201252 -113055331 + (TG)n Simple_repeat Simple_repeat 2 29 0 583 181 187 19 chr2 140202242 140202397 -113054186 - MER20 DNA MER1_type -4 215 35 2117 110 38 0 chr2 140202494 140202786 -113053797 - AluSx SINE Alu -9 303 1 225 0 0 0 chr2 140203102 140203127 -113053456 + (T)n Simple_repeat Simple_repeat 1 25 0 429 221 21 11 chr2 140203393 140203488 -113053095 + MER58A DNA MER1_type 1 96 -11 820 241 133 0 chr2 140203657 140203852 -113052731 + MER58A DNA MER1_type 4 224 0 278 308 162 18 chr2 140205070 140205468 -113051115 - L2 LINE L2 -67 3246 2791 234 91 0 0 chr2 140205961 140205994 -113050589 + (T)n Simple_repeat Simple_repeat 1 33 0 249 125 25 0 chr2 140206801 140206841 -113049742 + MER58A DNA MER1_type 52 92 -15 455 190 8 50 chr2 140206964 140207085 -113049498 + L2 LINE L2 3180 3295 -18 375 268 28 21 chr2 140207318 140207460 -113049123 + MIR SINE MIR 73 215 -47 801 226 11 0 chr2 140207473 140207679 -113048904 - AluJb SINE Alu 0 312 131 1424 164 116 30 chr2 140207689 140207957 -113048626 - AluJo SINE Alu -21 291 1 2547 69 3 0 chr2 140209289 140209593 -113046990 - AluSp SINE Alu -8 305 1 334 259 116 0 chr2 140209635 140209747 -113046836 - L2 LINE L2 0 3272 3148 26 0 0 0 chr2 140209940 140209966 -113046617 + AT_rich Low_complexity Low_complexity 1 26 0 2221 99 23 7 chr2 140211161 140211464 -113045119 + AluSg SINE Alu 3 310 0 2084 112 0 17 chr2 140211474 140211770 -113044813 - AluSq SINE Alu 0 313 23 666 250 88 22 chr2 140212491 140212719 -113043864 + MIR SINE MIR 8 250 -12 1147 188 33 5 chr2 140213243 140213456 -113043127 + MER20B DNA MER1_type 1 219 0 519 248 233 10 chr2 140213950 140214156 -113042427 - MIR SINE MIR -5 257 6 306 244 85 0 chr2 140214282 140214364 -113042219 + MIR SINE MIR 100 188 -74 900 95 24 3 chr2 140214369 140214509 -113042074 - MSTB1 LTR MaLR -7 425 304 373 197 14 0 chr2 140215015 140215086 -113041497 + L2 LINE L2 3242 3313 0 243 170 0 0 chr2 140218261 140218308 -113038275 + (TG)n Simple_repeat Simple_repeat 1 47 0 246 32 0 0 chr2 140218891 140218922 -113037661 + (TG)n Simple_repeat Simple_repeat 2 32 0 735 238 47 23 chr2 140220752 140220842 -113035741 + MER20B DNA MER1_type 1 87 -132 1732 147 22 29 chr2 140220842 140221156 -113035427 - AluJo SINE Alu 0 312 1 735 238 47 23 chr2 140221156 140221279 -113035304 + MER20B DNA MER1_type 87 219 0 583 253 35 48 chr2 140222385 140222538 -113034045 + MIR SINE MIR 32 183 -79 1702 147 84 28 chr2 140222538 140222893 -113033690 - THE1C LTR MaLR 0 375 1 583 253 35 48 chr2 140222893 140222968 -113033615 + MIR SINE MIR 183 257 -5 242 296 16 56 chr2 140223199 140223324 -113033259 - MLT1K LTR MaLR -4 584 465 352 285 102 70 chr2 140223527 140223783 -113032800 - MLT1K LTR MaLR -185 403 140 189 358 33 33 chr2 140224247 140224367 -113032216 + L2 LINE L2 3136 3255 -17 411 269 77 0 chr2 140225982 140226112 -113030471 + MIR SINE MIR 120 259 -3 236 183 84 42 chr2 140227752 140227823 -113028760 - L1ME4a LINE L1 -39 6082 6009 626 237 124 26 chr2 140227853 140228119 -113028464 - L2 LINE L2 -27 3286 2995 252 0 0 0 chr2 140228912 140228940 -113027643 + (T)n Simple_repeat Simple_repeat 1 28 0 1276 188 9 5 chr2 140229532 140229755 -113026828 + MER58A DNA MER1_type 1 224 0 390 221 172 28 chr2 140230664 140230809 -113025774 - L1ME4a LINE L1 -382 5739 5574 * 1329 249 99 102 chr2 140230792 140231696 -113024887 - HAL1 LINE L1 -1 2506 1609 2119 105 49 0 chr2 140231696 140231981 -113024602 - AluSx SINE Alu -9 303 5 1329 249 99 102 chr2 140231981 140232773 -113023810 - HAL1 LINE L1 -898 1609 816 311 277 144 25 chr2 140233108 140233310 -113023273 - L1ME4a LINE L1 -2255 5553 5328 797 233 43 48 chr2 140233582 140233792 -113022791 + MER58A DNA MER1_type 1 209 -15 2889 164 57 57 chr2 140234774 140235334 -113021249 + MER68 LTR ERV1 3 562 0 298 297 99 30 chr2 140236187 140236288 -113020295 - L2 LINE L2 -25 3288 3181 1476 192 95 30 chr2 140236417 140236755 -113019828 + MLT1A1 LTR MaLR 6 365 0 403 301 139 14 chr2 140236764 140236973 -113019610 - L2 LINE L2 -251 3062 2828 1753 163 0 4 chr2 140238728 140239004 -113017579 - AluJb SINE Alu -5 307 33 4818 52 3 3 chr2 140239825 140240406 -113016177 + LTR10C LTR ERV1 11 591 0 919 176 49 82 chr2 140240993 140241237 -113015346 - L1ME3A LINE L1 -277 5893 5658 1256 181 80 64 chr2 140241249 140241610 -113014973 - MSTB2 LTR MaLR 0 457 86 787 237 56 9 chr2 140241672 140241887 -113014696 - L1ME3A LINE L1 -521 5649 5425 1999 199 11 16 chr2 140244432 140244799 -113011784 + MLT1A1 LTR MaLR 1 365 0 1267 275 65 15 chr2 140244974 140245439 -113011144 - MER20B DNA MER1_type -9 774 287 400 250 64 83 chr2 140245474 140245630 -113010953 - MER5A DNA MER1_type -16 173 21 191 71 36 0 chr2 140245877 140245905 -113010678 + MIR SINE MIR 81 109 -99 436 168 54 21 chr2 140245905 140246090 -113010493 + ORSL DNA AcHobo 1 241 -34 261 280 85 34 chr2 140246108 140246226 -113010357 + MIR SINE MIR 107 230 -32 1543 289 97 38 chr2 140247028 140248121 -113008462 - L2 LINE L2 -90 3223 2063 1580 166 153 63 chr2 140248682 140248784 -113007799 - MLT1D LTR MaLR 0 505 414 1503 213 106 54 chr2 140248784 140249264 -113007319 + MLT1D LTR MaLR 1 505 0 1580 166 153 63 chr2 140249264 140249619 -113006964 - MLT1D LTR MaLR -91 414 7 324 64 0 0 chr2 140251384 140251431 -113005152 + (T)n Simple_repeat Simple_repeat 1 47 0 22631 19 0 0 chr2 140251433 140254802 -113001781 - L1HS LINE L1 -2 6153 2785 2608 225 85 25 chr2 140255641 140256321 -113000262 - MER21B LTR ERV1 -54 809 89 229 263 0 35 chr2 140256337 140256394 -113000189 + MER21B LTR ERV1 34 88 -775 229 241 0 17 chr2 140256417 140256475 -113000108 + MER21B LTR ERV1 19 75 -788 1229 115 111 14 chr2 140256604 140256812 -112999771 + MER30 DNA MER1_type 1 228 -2 229 241 0 17 chr2 140256819 140256877 -112999706 - MER21B LTR ERV1 -788 75 19 256 244 0 100 chr2 140256900 140256990 -112999593 - MER21B LTR ERV1 -775 88 8 364 231 148 28 chr2 140257059 140257241 -112999342 - L1ME3A LINE L1 -1 6169 5966 189 361 120 9 chr2 140257689 140257797 -112998786 + L3b LINE CR1 1462 1581 -2 2027 253 114 19 chr2 140258685 140258805 -112997778 + L1M4 LINE L1 3326 3433 -2713 1822 175 10 3 chr2 140258805 140259102 -112997481 + AluJo SINE Alu 5 303 -9 2027 253 114 19 chr2 140259102 140259711 -112996872 + L1M4 LINE L1 3433 4124 -2022 286 200 42 42 chr2 140259710 140259805 -112996778 + L1MC5 LINE L1 7832 7926 -35 * 1932 148 0 10 chr2 140259993 140260283 -112996300 - AluSx SINE Alu -25 287 1 2026 235 11 17 chr2 140262764 140263237 -112993346 - L1ME2 LINE L1 -18 6080 5611 632 244 42 9 chr2 140263233 140263446 -112993137 - L1ME2 LINE L1 -2752 3328 3109 * 1338 231 19 61 chr2 140263446 140263809 -112992774 - MLT2F LTR ERVL -8 655 308 1020 218 4 86 chr2 140263888 140264131 -112992452 - MER58A DNA MER1_type -1 223 1 1348 264 111 37 chr2 140264214 140264601 -112991982 - L1ME2 LINE L1 -4447 1814 1457 495 0 0 0 chr2 140264601 140264656 -112991927 + (TG)n Simple_repeat Simple_repeat 2 56 0 1348 264 111 37 chr2 140264656 140265380 -112991203 - L1ME2 LINE L1 -4804 1457 509 498 311 75 32 chr2 140265561 140265942 -112990641 - L1ME2 LINE L1 -5626 444 16 688 200 32 0 chr2 140266634 140266759 -112989824 - FLAM_A SINE Alu -4 129 1 201 311 95 0 chr2 140268609 140268683 -112987900 - MIR SINE MIR -117 145 65 310 284 65 65 chr2 140269725 140269894 -112986689 + MER5B DNA MER1_type 4 172 -6 454 238 134 6 chr2 140269897 140270061 -112986522 + MIR SINE MIR 77 261 -1 240 291 75 55 chr2 140270164 140270363 -112986220 - MLT1J LTR MaLR -7 504 302 375 169 39 0 chr2 140270560 140270637 -112985946 - L1MB8 LINE L1 0 6178 6099 978 162 0 7 chr2 140270637 140270785 -112985798 + AluJo SINE Alu 1 147 -165 3186 186 70 9 chr2 140270786 140271457 -112985126 - L1MB8 LINE L1 -74 6104 5393 334 313 0 9 chr2 140272255 140272370 -112984213 + MIR3 SINE MIR 93 206 -2 1824 163 54 0 chr2 140273852 140274147 -112982436 + AluSx SINE Alu 1 311 -1 495 0 0 0 chr2 140274922 140274977 -112981606 + (CA)n Simple_repeat Simple_repeat 2 56 0 433 244 47 24 chr2 140275603 140275730 -112980853 - L1PA16 LINE L1 0 6166 6037 1004 197 6 0 chr2 140276759 140276937 -112979646 + MER58A DNA MER1_type 45 223 -1 204 271 43 0 chr2 140277587 140277668 -112978915 - MIR SINE MIR -20 188 97 333 320 35 81 chr2 140278251 140278448 -112978135 + L2 LINE L2 2978 3165 -107 724 134 37 37 chr2 140278454 140278588 -112977995 - L1MA5A LINE L1 -1 6296 6163 791 122 41 0 chr2 140278588 140278711 -112977872 + L1MA5A LINE L1 6047 6174 -123 994 166 28 17 chr2 140280848 140281029 -112975554 - L1MB3 LINE L1 0 6183 6001 1027 195 32 0 chr2 140281030 140281220 -112975363 - L1MB3 LINE L1 -498 5673 5478 299 184 118 13 chr2 140282084 140282160 -112974423 - MER21B LTR ERV1 -372 491 408 228 295 152 9 chr2 140283899 140284011 -112972572 + MIR SINE MIR 34 161 -101 716 128 57 7 chr2 140284251 140284392 -112972191 - L1MA8 LINE L1 -4 6287 6140 428 209 12 0 chr2 140285256 140285342 -112971241 - MER2 DNA MER2_type -251 94 8 1550 228 120 100 chr2 140287264 140288496 -112968087 - L1MC5 LINE L1 -36 7925 6669 463 300 87 46 chr2 140288502 140288825 -112967758 - L2 LINE L2 -52 3261 2926 520 194 31 0 chr2 140289126 140289224 -112967359 - Tigger7 DNA MER2_type 0 2487 2387 1977 192 8 5 chr2 140289235 140289615 -112966968 - Tigger7 DNA MER2_type -2106 381 1 1001 287 112 49 chr2 140290489 140290850 -112965733 - L2 LINE L2 0 3313 2879 649 231 21 5 chr2 140290850 140291036 -112965547 - MER53 DNA DNA 0 189 1 1001 287 112 49 chr2 140291036 140291291 -112965292 - L2 LINE L2 -434 2879 2641 280 293 78 9 chr2 140291519 140291635 -112964948 + MIR SINE MIR 112 235 -27 239 276 143 38 chr2 140292119 140292224 -112964359 - MIR SINE MIR -73 135 20 275 0 0 28 chr2 140292433 140292469 -112964114 + (TG)n Simple_repeat Simple_repeat 2 36 0 241 207 98 0 chr2 140292544 140292626 -112963957 - L1ME4a LINE L1 -27 6094 6005 275 0 0 28 chr2 140293508 140293544 -112963039 + (TG)n Simple_repeat Simple_repeat 2 36 0 241 207 98 0 chr2 140293619 140293701 -112962882 - L1ME4a LINE L1 -27 6094 6005 7987 29 6 0 chr2 140294799 140296555 -112960028 + L1PA3 LINE L1 4415 6153 -2 23 0 0 0 chr2 140297457 140297480 -112959103 + AT_rich Low_complexity Low_complexity 1 23 0 249 269 0 26 chr2 140299058 140299136 -112957447 - MIR SINE MIR 0 262 187 881 208 21 10 chr2 140299911 140300103 -112956480 - MER58A DNA MER1_type -30 194 1 1709 180 7 11 chr2 140300155 140300439 -112956144 + AluJo SINE Alu 3 285 -27 319 263 42 0 chr2 140302224 140302319 -112954264 + L1MC4a LINE L1 5807 5905 -1903 207 204 0 0 chr2 140302340 140302384 -112954199 + (TA)n Simple_repeat Simple_repeat 2 45 0 563 148 83 0 chr2 140302452 140302560 -112954023 + L1MB3 LINE L1 6067 6183 0 317 296 127 72 chr2 140302576 140303008 -112953575 + L1MC4a LINE L1 6053 6508 -1300 1600 217 21 85 chr2 140303042 140303769 -112952814 + L1MC5 LINE L1 6542 7236 -725 636 279 60 26 chr2 140303804 140304187 -112952396 + L1MC5 LINE L1 7518 7913 -48 1436 138 129 8 chr2 140305458 140305698 -112950885 + AluSg1 SINE Alu 29 297 -12 349 258 42 17 chr2 140305911 140306031 -112950552 + L2 LINE L2 3191 3313 0 200 298 0 0 chr2 140306031 140306078 -112950505 + (TGAA)n Simple_repeat Simple_repeat 2 48 0 1106 168 20 0 chr2 140306184 140306387 -112950196 - MER6B DNA MER2_type 0 210 4 275 282 30 148 chr2 140306467 140306669 -112949914 - MER5B DNA MER1_type 0 178 1 1024 233 9 5 chr2 140306683 140306906 -112949677 + MER58A DNA MER1_type 1 224 0 344 314 24 24 chr2 140307558 140307682 -112948901 - MIR SINE MIR -128 134 11 754 241 106 25 chr2 140308553 140308948 -112947635 - MER113 DNA MER1_type? 0 521 95 934 144 42 0 chr2 140310590 140310757 -112945826 - MER2 DNA MER2_type -171 174 1 1112 251 60 3 chr2 140311845 140312144 -112944439 - MER58B DNA MER1_type 0 341 26 338 287 11 11 chr2 140312405 140312499 -112944084 - L2 LINE L2 -20 3293 3200 1256 283 74 39 chr2 140314846 140315672 -112940911 + L1MC4a LINE L1 5316 6177 -1631 2656 168 46 0 chr2 140315672 140316172 -112940411 + L1MB2 LINE L1 5646 6168 -3 1256 283 74 39 chr2 140316172 140316235 -112940348 + L1MC4a LINE L1 6177 6236 -1572 581 291 42 19 chr2 140316454 140316719 -112939864 + L1MC5 LINE L1 6963 7233 -728 203 0 37 0 chr2 140319000 140319027 -112937556 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 1129 316 81 9 chr2 140319655 140320101 -112936482 + L2 LINE L2 2835 3312 -1 210 305 105 38 chr2 140321772 140321877 -112934706 + L2 LINE L2 3198 3309 -4 399 283 165 28 chr2 140322267 140322479 -112934104 + MIR SINE MIR 4 244 -18 21 0 0 0 chr2 140323501 140323522 -112933061 + AT_rich Low_complexity Low_complexity 1 21 0 719 199 104 71 chr2 140326451 140326662 -112929921 + MER20 DNA MER1_type 1 218 -1 288 220 22 33 chr2 140328267 140328358 -112928225 + GA-rich Low_complexity Low_complexity 5 94 0 3392 148 42 0 chr2 140330173 140330776 -112925807 - L1MA4A LINE L1 -19 6284 5657 744 150 7 33 chr2 140331154 140331307 -112925276 + MER46A DNA MER2_type 88 236 0 205 305 182 48 chr2 140332242 140332655 -112923928 + L2 LINE L2 2804 3271 -1 26 74 0 0 chr2 140334735 140334789 -112921794 + AT_rich Low_complexity Low_complexity 1 54 0 278 282 120 0 chr2 140336144 140336263 -112920320 + MIR SINE MIR 37 167 -58 230 333 20 10 chr2 140337373 140337475 -112919108 + MIR SINE MIR 19 121 -87 1625 189 37 37 chr2 140337637 140337992 -112918591 + MLT1A1 LTR MaLR 1 355 -10 1091 0 25 0 chr2 140338874 140339026 -112917557 + L1PA5 LINE L1 6014 6168 0 1632 187 141 90 chr2 140340136 140340299 -112916284 + L1MC5 LINE L1 7157 7310 -651 1972 112 3 31 chr2 140340299 140340585 -112915998 + AluSx SINE Alu 1 278 -34 1632 187 141 90 chr2 140340585 140341158 -112915425 + L1MC5 LINE L1 7310 7931 -30 346 296 81 54 chr2 140341783 140341969 -112914614 - MIR SINE MIR -24 238 48 180 0 0 0 chr2 140342015 140342035 -112914548 + (A)n Simple_repeat Simple_repeat 1 20 0 263 27 0 27 chr2 140342037 140342074 -112914509 + (TA)n Simple_repeat Simple_repeat 1 36 0 2235 109 6 6 chr2 140342077 140342390 -112914193 - AluSp SINE Alu 0 313 1 367 253 92 89 chr2 140342722 140343003 -112913580 + MLT1J LTR MaLR 230 511 0 241 231 299 17 chr2 140345364 140345481 -112911102 - MER5A DNA MER1_type -31 158 9 297 258 67 0 chr2 140345818 140345907 -112910676 + MIR SINE MIR 14 108 -154 932 248 47 5 chr2 140346086 140346300 -112910283 + MER58A DNA MER1_type 2 224 0 229 331 58 0 chr2 140346675 140346796 -112909787 - MIR3 SINE MIR -45 163 36 420 302 7 29 chr2 140347282 140347421 -112909162 + L2 LINE L2 2633 2768 -546 399 299 153 15 chr2 140347733 140347870 -112908713 + L2 LINE L2 3117 3272 0 226 211 250 19 chr2 140348110 140348214 -112908369 + MIR SINE MIR 26 153 -55 277 216 182 74 chr2 140348218 140348394 -112908189 + L1ME1 LINE L1 5811 6005 -161 270 0 0 0 chr2 140348440 140348470 -112908113 + (TG)n Simple_repeat Simple_repeat 1 30 0 218 269 37 37 chr2 140349854 140349962 -112906621 + MIR SINE MIR 29 136 -72 249 320 80 7 chr2 140350672 140350822 -112905761 + MER5A DNA MER1_type 12 172 -6 1695 153 0 0 chr2 140353424 140353672 -112902911 + AluJb SINE Alu 3 250 -62 304 221 39 0 chr2 140353871 140353948 -112902635 - MIR SINE MIR -80 182 103 181 260 26 0 chr2 140354987 140355064 -112901519 + CT-rich Low_complexity Low_complexity 2 80 0 242 269 146 58 chr2 140355888 140356182 -112900401 - MLT1J LTR MaLR -82 429 110 649 243 46 0 chr2 140356750 140356923 -112899660 + LTR41 LTR ERVL 1 181 -592 529 295 18 40 chr2 140357149 140357329 -112899254 + MIR SINE MIR 7 177 -85 2233 121 0 0 chr2 140357329 140357627 -112898956 - AluSx SINE Alu -14 298 1 529 295 18 40 chr2 140357627 140357686 -112898897 + MIR SINE MIR 177 236 -26 197 290 100 20 chr2 140358344 140358444 -112898139 + L2 LINE L2 3150 3257 -15 480 259 81 32 chr2 140358622 140358807 -112897776 + MIR SINE MIR 59 252 -10 229 252 178 44 chr2 140358904 140359039 -112897544 + MIR SINE MIR 109 261 -1 271 328 107 8 chr2 140359168 140359290 -112897293 + MIR3 SINE MIR 4 137 -71 627 233 12 49 chr2 140359879 140360042 -112896541 + FAM SINE Alu 1 157 -18 780 0 0 29 chr2 140360042 140360145 -112896438 + (TAGA)n Simple_repeat Simple_repeat 4 103 0 189 0 0 0 chr2 140360171 140360192 -112896391 + (TAGG)n Simple_repeat Simple_repeat 3 23 0 445 69 0 28 chr2 140360198 140360270 -112896313 + (CAGA)n Simple_repeat Simple_repeat 2 71 0 264 98 38 0 chr2 140360270 140360311 -112896272 + FLAM SINE Alu 86 109 -193 192 77 0 0 chr2 140360311 140360337 -112896246 + (CAGA)n Simple_repeat Simple_repeat 2 27 0 264 98 38 0 chr2 140360337 140360351 -112896232 + FLAM SINE Alu 109 121 -181 192 233 17 33 chr2 140360757 140360817 -112895766 + MER5B DNA MER1_type 4 62 -116 878 189 19 6 chr2 140360820 140360979 -112895604 + AluJo SINE Alu 137 297 -15 356 231 192 0 chr2 140360980 140361084 -112895499 + MER5B DNA MER1_type 55 178 0 201 346 141 13 chr2 140361149 140361305 -112895278 - MER5A DNA MER1_type -1 188 13 1164 206 80 32 chr2 140362351 140362416 -112894167 + MER58B DNA MER1_type 1 61 -2359 2008 63 100 4 chr2 140362416 140362686 -112893897 - AluY SINE Alu -15 296 1 1164 206 80 32 chr2 140362686 140362931 -112893652 + MER58B DNA MER1_type 61 326 -15 1601 181 43 3 chr2 140364758 140365040 -112891543 - AluJb SINE Alu -19 293 1 1716 178 16 23 chr2 140366048 140366352 -112890231 - AluJo SINE Alu -10 302 1 1397 249 69 49 chr2 140366354 140366565 -112890018 - L1MEc LINE L1 -4072 2324 2119 1980 111 42 7 chr2 140366565 140366853 -112889730 - AluSq SINE Alu -15 298 1 1397 249 69 49 chr2 140366853 140367320 -112889263 - L1MEc LINE L1 -4277 2119 1632 924 186 16 5 chr2 140367320 140367514 -112889069 - L1MD2 LINE L1 -3 6356 6161 182 114 0 29 chr2 140367831 140367866 -112888717 + (TG)n Simple_repeat Simple_repeat 1 34 0 1648 173 11 97 chr2 140369442 140369671 -112886912 + MSTD LTR MaLR 1 248 -148 180 77 0 0 chr2 140369671 140369697 -112886886 + (CA)n Simple_repeat Simple_repeat 1 26 0 1648 173 11 97 chr2 140369697 140369708 -112886875 + MSTD LTR MaLR 248 258 -138 189 0 0 0 chr2 140369708 140369729 -112886854 + (TC)n Simple_repeat Simple_repeat 1 21 0 1648 173 11 97 chr2 140369729 140369920 -112886663 + MSTD LTR MaLR 258 396 0 285 256 95 60 chr2 140370505 140370673 -112885910 + L2 LINE L2 3140 3313 0 23 0 0 0 chr2 140370816 140370839 -112885744 + AT_rich Low_complexity Low_complexity 1 23 0 393 293 13 33 chr2 140371111 140371261 -112885322 + MER5B DNA MER1_type 6 152 -26 1495 217 24 41 chr2 140371855 140372144 -112884439 - MLT1A1 LTR MaLR 0 365 82 2393 69 0 50 chr2 140372144 140372463 -112884120 - AluY SINE Alu -8 303 1 1495 217 24 41 chr2 140372463 140372542 -112884041 - MLT1A1 LTR MaLR -283 82 3 611 67 0 0 chr2 140373093 140373168 -112883415 + AluS SINE Alu 9 83 -229 676 242 39 0 chr2 140373404 140373586 -112882997 + MER5A DNA MER1_type 1 189 0 313 139 14 14 chr2 140376191 140376263 -112880320 + GA-rich Low_complexity Low_complexity 1 72 0 310 220 50 58 chr2 140377025 140377172 -112879411 + L1ME4a LINE L1 5255 5408 -758 2176 117 10 0 chr2 140377250 140377549 -112879034 + AluSx SINE Alu 1 302 -10 1855 126 65 4 chr2 140377774 140378052 -112878531 + AluSq SINE Alu 1 295 -18 270 136 0 0 chr2 140378057 140378101 -112878482 + (GGGGA)n Simple_repeat Simple_repeat 2 45 0 277 248 124 7 chr2 140378187 140378340 -112878243 + L1ME4a LINE L1 5864 6034 -87 654 83 0 0 chr2 140378625 140378709 -112877874 + AluSp/q SINE Alu 213 296 -17 1866 127 4 0 chr2 140379501 140379754 -112876829 - AluSx SINE Alu -54 258 5 318 264 45 0 chr2 140379765 140379875 -112876708 - L1M4 LINE L1 -985 5659 5545 26 98 0 0 chr2 140379878 140379960 -112876623 + AT_rich Low_complexity Low_complexity 1 82 0 1988 259 41 6 chr2 140379962 140380639 -112875944 - L1M4 LINE L1 -1107 5537 4837 4612 248 52 24 chr2 140380641 140381752 -112874831 - L1M4 LINE L1 -4731 1915 752 315 0 0 0 chr2 140381752 140381787 -112874796 + (TG)n Simple_repeat Simple_repeat 2 36 0 4612 248 52 24 chr2 140381787 140382283 -112874300 - L1M4 LINE L1 -5894 752 272 322 113 145 0 chr2 140382673 140382735 -112873848 + AluSp/q SINE Alu 223 293 -10 483 285 79 8 chr2 140382955 140383169 -112873414 + MIR SINE MIR 8 229 -33 830 176 198 0 chr2 140383395 140383582 -112873001 - MER58A DNA MER1_type 0 224 1 4402 155 59 37 chr2 140385100 140385173 -112871410 + MER6 DNA MER2_type -18 52 -813 4947 108 6 48 chr2 140385173 140385894 -112870689 + LTR8 LTR ERV1 2 691 0 4402 155 59 37 chr2 140385894 140386209 -112870374 + MER6 DNA MER2_type 52 358 -507 195 100 0 0 chr2 140386209 140386239 -112870344 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 4402 155 59 37 chr2 140386239 140386716 -112869867 + MER6 DNA MER2_type 358 865 0 780 384 31 71 chr2 140386788 140387437 -112869146 - L1MC4a LINE L1 -1871 5937 5315 21 0 0 0 chr2 140387598 140387619 -112868964 + AT_rich Low_complexity Low_complexity 1 21 0 244 280 64 16 chr2 140387878 140387892 -112868691 + LTR24C LTR ERV1 348 360 -275 421 228 0 11 chr2 140387892 140387984 -112868599 + MER58C DNA MER1_type 113 203 -12 244 280 64 16 chr2 140387984 140388003 -112868580 + LTR24C LTR ERV1 360 478 -157 297 303 91 53 chr2 140388147 140388522 -112868061 + L1ME LINE L1 5354 5748 -373 2440 216 58 52 chr2 140388522 140389123 -112867460 + MER77 LTR ERV1 1 605 0 297 303 91 53 chr2 140389123 140389163 -112867420 + L1ME LINE L1 5748 5785 -336 884 252 99 0 chr2 140389295 140389517 -112867066 - MIR SINE MIR -17 245 2 302 298 94 30 chr2 140389759 140389994 -112866589 - L1MC4a LINE L1 -1311 4835 4586 220 254 51 0 chr2 140390280 140390339 -112866244 - L2 LINE L2 0 3313 3252 488 294 34 40 chr2 140390339 140390516 -112866067 + MIR SINE MIR 44 219 -43 811 272 92 38 chr2 140391971 140392339 -112864244 + L2 LINE L2 2913 3300 -13 927 178 51 15 chr2 140392678 140392875 -112863708 - ORSL DNA AcHobo -3 272 69 311 167 0 0 chr2 140392964 140393012 -112863571 - ORSL DNA AcHobo -225 50 3 759 112 0 0 chr2 140393331 140393438 -112863145 - MSTC LTR MaLR -321 107 1 495 240 23 8 chr2 140393840 140393969 -112862614 - L2 LINE L2 -2 3311 3181 213 111 0 28 chr2 140394022 140394058 -112862525 + (TG)n Simple_repeat Simple_repeat 2 36 0 941 140 0 22 chr2 140394144 140394280 -112862303 + FLAM_C SINE Alu 1 133 0 1641 185 73 15 chr2 140394337 140394678 -112861905 - MLT1A1 LTR MaLR -1 364 4 198 0 0 0 chr2 140394940 140394962 -112861621 + (T)n Simple_repeat Simple_repeat 1 22 0 2172 110 0 22 chr2 140395028 140395345 -112861238 - AluSx SINE Alu -2 310 1 736 262 103 9 chr2 140395395 140395609 -112860974 + MIR SINE MIR 1 234 -28 18650 40 4 1 chr2 140395854 140398110 -112858473 + L1P LINE L1 3140 5403 -743 22951 43 46 2 chr2 140398215 140401061 -112855522 - L1P LINE L1 -3177 2969 1 3953 188 9 9 chr2 140401063 140401809 -112854774 - L1P LINE L1 -1977 4169 3424 2299 146 16 36 chr2 140401818 140402007 -112854576 + L1PA16 LINE L1 5786 5964 -202 2165 133 0 0 chr2 140402007 140402309 -112854274 + AluSq SINE Alu 1 302 -11 2299 146 16 36 chr2 140402309 140402504 -112854079 + L1PA16 LINE L1 5964 6162 -4 2165 112 0 0 chr2 140403096 140403383 -112853200 - AluY SINE Alu -24 287 1 1751 144 37 107 chr2 140403432 140403806 -112852777 - MER7A DNA MER2_type 0 346 1 411 228 89 49 chr2 140404047 140404170 -112852413 - L2 LINE L2 -7 3306 3179 1234 175 30 17 chr2 140404204 140404438 -112852145 + AluJo SINE Alu 61 297 -15 478 325 97 21 chr2 140404547 140404972 -112851611 - L2 LINE L2 -399 2915 2459 631 201 135 15 chr2 140405094 140405353 -112851230 + L1ME1 LINE L1 2937 3226 -2920 6497 216 68 31 chr2 140405374 140406547 -112850036 + L1ME1 LINE L1 3457 4585 -1581 2356 89 3 3 chr2 140406547 140406850 -112849733 - AluSp SINE Alu -10 303 1 6497 216 68 31 chr2 140406850 140407902 -112848681 + L1ME1 LINE L1 4585 5800 -366 2532 61 0 10 chr2 140407902 140408214 -112848369 + AluY SINE Alu 1 309 -2 6497 216 68 31 chr2 140408214 140408590 -112847993 + L1ME1 LINE L1 5800 6161 -5 1515 95 0 10 chr2 140409056 140409256 -112847327 - AluSq SINE Alu -13 300 103 2194 106 3 0 chr2 140409780 140410073 -112846510 + AluSp SINE Alu 2 295 -18 2498 60 39 15 chr2 140410588 140410919 -112845664 + L1PA13 LINE L1 5824 6162 -1 2135 126 0 3 chr2 140410920 140411222 -112845361 + AluSx SINE Alu 1 301 -11 22 0 0 0 chr2 140411222 140411244 -112845339 + AT_rich Low_complexity Low_complexity 1 22 0 2160 165 91 54 chr2 140412209 140412388 -112844195 - MLT1D LTR MaLR -1 554 383 2554 81 0 0 chr2 140412388 140412698 -112843885 - AluSx SINE Alu -2 310 1 2160 165 91 54 chr2 140412698 140413004 -112843579 - MLT1D LTR MaLR -172 383 1 20181 28 0 7 chr2 140413202 140416261 -112840322 + L1PA2 LINE L1 3137 6189 0 344 189 27 27 chr2 140416261 140416335 -112840248 + L1 LINE L1 4158 4231 -1915 21 107 0 0 chr2 140416404 140416488 -112840095 + AT_rich Low_complexity Low_complexity 1 84 0 444 250 57 83 chr2 140416540 140416737 -112839846 - L1ME4a LINE L1 -119 6002 5814 1690 186 34 0 chr2 140416737 140417033 -112839550 - AluJo SINE Alu -6 306 1 444 250 57 83 chr2 140417033 140417135 -112839448 - L1ME4a LINE L1 -307 5814 5711 2079 194 130 69 chr2 140418215 140418417 -112838166 + LTR1B LTR ERV1 1 189 -637 411 21 0 0 chr2 140418417 140418465 -112838118 + (GAGAA)n Simple_repeat Simple_repeat 5 52 0 2079 194 130 69 chr2 140418465 140419001 -112837582 + LTR1B LTR ERV1 189 784 -42 434 251 78 0 chr2 140419564 140419718 -112836865 - MIR SINE MIR -1 207 35 1872 160 18 0 chr2 140420023 140420322 -112836261 + AluSx SINE Alu 3 306 0 2142 113 7 0 chr2 140420390 140420674 -112835909 + AluSx SINE Alu 10 295 -17 1675 209 30 9 chr2 140420837 140421291 -112835292 - L1MD2 LINE L1 -361 6392 6045 805 200 0 0 chr2 140421293 140421428 -112835155 - MER58B DNA MER1_type 0 341 207 4274 227 34 28 chr2 140421494 140423052 -112833531 - L1MD2 LINE L1 -518 6042 4476 4752 243 62 22 chr2 140423151 140424337 -112832246 - L1MD2 LINE L1 -2373 4167 2879 2121 120 0 17 chr2 140424337 140424638 -112831945 + AluSx SINE Alu 1 296 -16 4752 243 62 22 chr2 140424638 140425216 -112831367 - L1MD2 LINE L1 -3661 2879 2326 1596 229 79 19 chr2 140425187 140425668 -112830915 - L1M4 LINE L1 -893 5647 5138 * 195 389 61 22 chr2 140427749 140428060 -112828523 + L2 LINE L2 2170 2492 -822 2828 124 69 13 chr2 140428447 140428897 -112827686 + L1MC1 LINE L1 5859 6333 0 393 306 81 12 chr2 140429481 140429641 -112826942 - MIR SINE MIR -23 239 69 2256 96 3 3 chr2 140430109 140430412 -112826171 + AluSc SINE Alu 1 303 -6 233 284 45 0 chr2 140431637 140431704 -112824879 - MLT1J2 LTR MaLR -309 141 72 341 260 201 59 chr2 140432047 140432177 -112824406 + HAL1 LINE L1 2075 2185 -322 2105 203 101 15 chr2 140432177 140432651 -112823932 - LTR40a LTR ERVL -1 518 4 341 260 201 59 chr2 140432651 140432893 -112823690 + HAL1 LINE L1 2185 2500 -7 1240 141 36 102 chr2 140434305 140434564 -112822019 + MER33 DNA MER1_type 14 248 -2337 2295 114 3 0 chr2 140434564 140434871 -112821712 - AluSx SINE Alu -2 310 3 1240 141 36 102 chr2 140434871 140434944 -112821639 + MER33 DNA MER1_type 248 324 0 288 0 0 0 chr2 140435379 140435411 -112821172 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2034 138 0 0 chr2 140435414 140435696 -112820887 - AluSx SINE Alu -30 282 1 2264 109 7 0 chr2 140435756 140436049 -112820534 - AluSx SINE Alu -17 295 1 276 303 0 0 chr2 140436991 140437057 -112819526 + (CA)n Simple_repeat Simple_repeat 2 67 0 186 286 120 36 chr2 140437105 140437297 -112819286 + L2 LINE L2 1793 2000 -1314 1420 208 60 81 chr2 140437337 140437819 -112818764 + MLT1D LTR MaLR 34 505 0 1424 161 27 111 chr2 140437923 140438328 -112818255 - MLT1A2 LTR MaLR -3 371 1 21 0 0 0 chr2 140438721 140438742 -112817841 + AT_rich Low_complexity Low_complexity 1 21 0 2169 109 7 10 chr2 140438792 140439096 -112817487 + AluSq SINE Alu 3 305 -8 397 310 132 16 chr2 140439104 140439362 -112817221 + L3 LINE CR1 940 1227 -350 558 310 65 4 chr2 140439422 140439651 -112816932 + MIR SINE MIR 15 257 -5 193 345 58 29 chr2 140439673 140439812 -112816771 + L3 LINE CR1 1337 1479 -98 2271 80 7 7 chr2 140440552 140440840 -112815743 - AluSx SINE Alu -22 290 3 1143 267 109 80 chr2 140441125 140441244 -112815339 - L1M4 LINE L1 -997 5385 5271 2001 124 38 3 chr2 140441244 140441534 -112815049 + AluSq SINE Alu 1 300 -13 1143 267 109 80 chr2 140441534 140442266 -112814317 - L1M4 LINE L1 -1111 5271 4562 2160 106 0 0 chr2 140442266 140442541 -112814042 - AluSq SINE Alu -38 275 1 1143 267 109 80 chr2 140442541 140442928 -112813655 - L1M4 LINE L1 -1820 4562 4188 1909 81 0 0 chr2 140442928 140443162 -112813421 - AluSq SINE Alu -12 301 68 1143 267 109 80 chr2 140443162 140443506 -112813077 - L1M4 LINE L1 -2194 4188 3755 1096 196 4 48 chr2 140443507 140443736 -112812847 - MER20 DNA MER1_type 0 219 1 307 273 105 33 chr2 140443759 140444093 -112812490 - L1M4 LINE L1 -2706 3676 3319 243 244 83 51 chr2 140444148 140444304 -112812279 - L1M4 LINE L1 -3213 3169 3009 383 248 77 8 chr2 140444421 140444538 -112812045 - MER112 DNA MER1_type 0 260 136 271 268 14 49 chr2 140444542 140444684 -112811899 + MER104 DNA Tc2 29 165 -15 1958 138 3 7 chr2 140444686 140444983 -112811600 + AluSx SINE Alu 1 296 -16 789 299 48 5 chr2 140445113 140445618 -112810965 - L1M4 LINE L1 -3532 2850 2327 294 274 49 10 chr2 140445980 140446082 -112810501 + HAL1 LINE L1 2 107 -2400 1903 133 3 11 chr2 140446082 140446428 -112810155 + AluSq SINE Alu 1 344 0 1043 271 85 18 chr2 140446679 140447077 -112809506 + HAL1 LINE L1 110 534 -1973 2179 104 7 26 chr2 140447093 140447401 -112809182 + AluSq SINE Alu 1 302 -11 23 0 0 0 chr2 140448499 140448522 -112808061 + AT_rich Low_complexity Low_complexity 1 23 0 1868 102 32 29 chr2 140448872 140449350 -112807233 - MER51A LTR ERV1 0 634 1 729 228 47 6 chr2 140449350 140449521 -112807062 + MIR SINE MIR 64 241 -21 29 70 0 0 chr2 140450025 140450082 -112806501 + AT_rich Low_complexity Low_complexity 1 57 0 1937 138 10 29 chr2 140450162 140450473 -112806110 - AluSx SINE Alu -7 305 1 585 272 66 16 chr2 140451000 140451243 -112805340 - MER112 DNA MER1_type 0 256 2 738 332 30 0 chr2 140451275 140451636 -112804947 + L1ME4a LINE L1 5529 5900 -221 371 167 135 21 chr2 140451680 140451776 -112804807 + L1ME4a LINE L1 5991 6097 -24 2565 175 12 19 chr2 140452097 140452583 -112804000 - MLT1D LTR MaLR -2 503 21 24 0 0 0 chr2 140453327 140453351 -112803232 + AT_rich Low_complexity Low_complexity 1 24 0 34 0 0 0 chr2 140453415 140453449 -112803134 + AT_rich Low_complexity Low_complexity 1 34 0 358 132 8 2 chr2 140453449 140453706 -112802877 + AluJo SINE Alu 1 301 -1 745 241 0 0 chr2 140453710 140453851 -112802732 - AluJo SINE Alu -31 281 141 21 0 0 0 chr2 140453987 140454008 -112802575 + AT_rich Low_complexity Low_complexity 1 21 0 237 399 14 21 chr2 140454062 140454205 -112802378 + L2 LINE L2 2954 3095 -177 239 275 14 0 chr2 140454286 140454355 -112802228 - MIR3 SINE MIR -54 154 85 289 308 38 23 chr2 140454498 140454631 -112801952 - L2 LINE L2 -11 3302 3168 212 266 64 43 chr2 140454768 140454862 -112801721 - MIR SINE MIR -6 256 161 754 196 128 5 chr2 140454955 140455159 -112801424 - MIR SINE MIR -30 232 4 511 231 8 8 chr2 140455340 140455461 -112801122 - MIR SINE MIR -108 154 34 2160 156 23 3 chr2 140456071 140456423 -112800160 + MLT1A1 LTR MaLR 5 363 -2 1922 140 0 4 chr2 140457143 140457421 -112799162 + AluSx SINE Alu 1 277 -35 3099 229 6 6 chr2 140458218 140458865 -112797718 - MER82 DNA MER2_type -6 647 1 327 205 248 8 chr2 140459094 140459211 -112797372 - LTR33 LTR ERVL -354 167 23 275 230 168 26 chr2 140459640 140459753 -112796830 + L1MC/D LINE L1 5702 5830 -1978 486 216 136 37 chr2 140460197 140460359 -112796224 + MER5B DNA MER1_type 1 178 0 185 152 0 0 chr2 140460640 140460673 -112795910 - L2 LINE L2 -18 3295 3263 804 157 0 50 chr2 140460749 140460889 -112795694 - AluJo SINE Alu -179 133 1 1288 170 101 104 chr2 140461154 140461519 -112795064 + MLT1A2 LTR MaLR 9 372 -2 514 243 19 0 chr2 140461562 140461669 -112794914 + MER81 DNA DNA 6 114 0 629 176 81 0 chr2 140462530 140462666 -112793917 + MIR SINE MIR 115 261 -1 871 261 103 90 chr2 140462804 140463271 -112793312 - MLT1K LTR MaLR -106 482 10 297 329 12 55 chr2 140463329 140463493 -112793090 - MER5B DNA MER1_type -1 177 21 1511 138 98 16 chr2 140463494 140463748 -112792835 - AluJb SINE Alu -23 289 15 228 86 0 0 chr2 140463964 140463999 -112792584 + (TTCA)n Simple_repeat Simple_repeat 4 38 0 219 368 0 0 chr2 140464181 140464238 -112792345 + L2 LINE L2 3126 3182 -90 554 199 84 8 chr2 140464293 140464424 -112792159 - MER69 DNA AcHobo -2 2524 2384 849 122 9 0 chr2 140464504 140464694 -112791889 - FLAM_C SINE Alu 0 193 3 318 254 0 0 chr2 140464777 140464844 -112791739 - MER69 DNA AcHobo -110 67 1 686 238 21 42 chr2 140464862 140465102 -112791481 + LTR33 LTR ERVL 277 511 -10 2132 104 3 3 chr2 140465274 140465562 -112791021 - AluSc SINE Alu -21 288 1 925 234 151 133 chr2 140465954 140466504 -112790079 - MLT1K LTR MaLR -26 562 3 230 293 78 0 chr2 140466633 140466749 -112789834 + MIR3 SINE MIR 60 184 -24 3236 154 63 13 chr2 140467985 140468616 -112787967 - Charlie1a DNA MER1_type 0 1455 793 206 236 0 14 chr2 140468619 140468691 -112787892 + (TATAA)n Simple_repeat Simple_repeat 4 74 0 2939 194 32 39 chr2 140468948 140469634 -112786949 - Charlie1a DNA MER1_type -693 762 82 479 302 107 5 chr2 140469634 140469849 -112786734 - L2 LINE L2 -2127 1187 951 188 247 110 0 chr2 140469973 140470046 -112786537 - MIR SINE MIR 0 262 182 22 0 0 0 chr2 140470048 140470070 -112786513 + AT_rich Low_complexity Low_complexity 1 22 0 350 159 87 14 chr2 140470075 140470144 -112786439 + LTR54 LTR ERV1 5 78 -432 264 232 83 124 chr2 140470158 140470399 -112786184 + MER57A LTR ERV1 125 355 -48 605 176 40 24 chr2 140470616 140470741 -112785842 - L1M4b LINE L1 -6601 258 132 1789 150 0 49 chr2 140471001 140471160 -112785423 - AluJo SINE Alu -21 291 153 1995 85 41 34 chr2 140471160 140471453 -112785130 - AluY SINE Alu -16 295 1 1789 150 0 49 chr2 140471453 140471599 -112784984 - AluJo SINE Alu -159 153 1 2216 88 28 0 chr2 140471797 140472081 -112784502 - AluSc SINE Alu -17 292 1 865 85 0 0 chr2 140472167 140472273 -112784310 + AluSg/x SINE Alu 190 295 -14 1264 254 61 17 chr2 140472300 140472710 -112783873 + L1MC4a LINE L1 5643 6070 -1738 770 265 76 5 chr2 140472861 140473084 -112783499 - MIR SINE MIR -16 246 8 677 135 0 0 chr2 140473147 140473243 -112783340 + AluJb SINE Alu 5 100 -212 1400 132 5 0 chr2 140473243 140473440 -112783143 - LTR12 LTR ERV1 -138 576 379 5611 89 37 49 chr2 140473444 140474276 -112782307 - LTR12 LTR ERV1 -4 822 1 6056 83 1 0 chr2 140474280 140475049 -112781534 - HERV9 LTR ERV1 -4 8395 7626 1778 115 72 28 chr2 140475047 140475464 -112781119 - HERV17 LTR ERV1 -3314 4471 1275 * 1974 130 25 0 chr2 140475451 140475775 -112780808 - HERV17 LTR ERV1 -7577 1049 718 37272 91 9 5 chr2 140475811 140480748 -112775835 - HERV17 LTR ERV1 -1994 444 1 5393 65 35 0 chr2 140480757 140481422 -112775161 - LTR12 LTR ERV1 0 688 1 1112 154 43 11 chr2 140481422 140481610 -112774973 + AluJb SINE Alu 99 292 -20 1035 296 29 0 chr2 140481894 140482171 -112774412 - MER115 DNA AcHobo 0 693 409 2094 138 3 0 chr2 140482207 140482503 -112774080 + AluSx SINE Alu 1 297 -15 2952 90 25 0 chr2 140482503 140482905 -112773678 + L1PA7 LINE L1 5740 6151 -3 1059 277 91 30 chr2 140483141 140483480 -112773103 - MER115 DNA AcHobo -325 368 9 1564 221 38 30 chr2 140484702 140485088 -112771495 + MLT1I LTR MaLR 6 397 -12 668 204 0 178 chr2 140485088 140485213 -112771370 + MER5A DNA MER1_type 1 68 -121 1594 146 0 32 chr2 140485213 140485466 -112771117 + AluJo SINE Alu 1 245 -67 668 204 0 178 chr2 140485466 140485570 -112771013 + MER5A DNA MER1_type 68 189 0 1564 221 38 30 chr2 140485570 140485581 -112771002 + MLT1I LTR MaLR 397 406 -3 259 108 0 0 chr2 140486689 140486726 -112769857 + tRNA-Met-e tRNA tRNA 1 37 -38 27 29 0 0 chr2 140487009 140487043 -112769540 + AT_rich Low_complexity Low_complexity 1 34 0 2036 116 7 14 chr2 140487051 140487358 -112769225 + AluSx SINE Alu 1 305 0 255 143 129 0 chr2 140487459 140487529 -112769054 + L1MC4 LINE L1 6614 6692 -1350 1744 155 3 21 chr2 140487529 140487819 -112768764 - AluJo SINE Alu -27 285 1 295 219 14 27 chr2 140487846 140487919 -112768664 - MER5B DNA MER1_type 0 178 107 535 209 95 121 chr2 140487989 140488410 -112768173 - MER65B LTR ERV1 -121 410 1 580 154 96 122 chr2 140488445 140488518 -112768065 + MER53 DNA DNA 5 78 -111 2166 130 0 3 chr2 140488518 140488825 -112767758 + AluSx SINE Alu 1 306 -6 580 154 96 122 chr2 140488825 140488939 -112767644 + MER53 DNA DNA 78 187 -2 186 235 0 39 chr2 140488977 140489028 -112767555 + MER5B DNA MER1_type 130 178 0 3115 20 3 0 chr2 140489893 140490247 -112766336 - L1PA3 LINE L1 -124 6031 5677 * 3989 34 10 2 chr2 140490238 140490745 -112765838 + L1P LINE L1 2923 3433 -2713 241 280 180 0 chr2 140490797 140490897 -112765686 - L1ME4a LINE L1 -30 6091 5974 554 263 181 11 chr2 140491626 140491862 -112764721 - MIR SINE MIR 0 262 3 2157 102 7 0 chr2 140492412 140492695 -112763888 - AluSx SINE Alu -23 289 5 323 204 118 21 chr2 140492982 140493020 -112763563 - MLT2B1 LTR ERVL 0 520 487 441 0 0 0 chr2 140493020 140493069 -112763514 + (TG)n Simple_repeat Simple_repeat 2 50 0 323 204 118 21 chr2 140493069 140493084 -112763499 - MLT2B1 LTR ERVL -33 487 475 201 39 0 0 chr2 140493084 140493110 -112763473 + (GA)n Simple_repeat Simple_repeat 1 26 0 323 204 118 21 chr2 140493110 140493148 -112763435 - MLT2B1 LTR ERVL -45 475 419 * 1046 157 22 11 chr2 140493143 140493328 -112763255 - MLT2D LTR ERVL -227 187 1 241 307 115 64 chr2 140493691 140494350 -112762233 - L2 LINE L2 -217 3055 2346 2154 113 0 14 chr2 140494596 140494889 -112761694 + AluSx SINE Alu 1 289 -23 487 274 138 36 chr2 140494904 140495092 -112761491 - MIR SINE MIR -30 232 31 43621 32 25 1 chr2 140495194 140501199 -112755384 + L1PA2 LINE L1 7 6155 0 767 116 18 9 chr2 140501578 140501690 -112754893 - L1PA10 LINE L1 -1 6167 6055 1797 135 36 87 chr2 140502167 140502523 -112754060 + MER7A DNA MER2_type 1 336 -10 270 95 0 0 chr2 140502523 140502565 -112754018 + (TG)n Simple_repeat Simple_repeat 1 42 0 2205 117 0 19 chr2 140502829 140503145 -112753438 + AluSx SINE Alu 3 312 0 310 271 47 36 chr2 140503246 140503438 -112753145 - L1MEc LINE L1 -4154 2242 2049 1846 216 115 7 chr2 140503477 140503912 -112752671 + MLT1D LTR MaLR 24 505 0 1151 194 75 19 chr2 140503912 140504180 -112752403 + MLT1D-int LTR MaLR 1 283 -1088 2205 120 0 0 chr2 140504187 140504486 -112752097 + AluSp SINE Alu 1 299 -14 2361 112 0 0 chr2 140504621 140504933 -112751650 - AluSx SINE Alu 0 312 1 1020 258 42 30 chr2 140504933 140505266 -112751317 - L1M4 LINE L1 -2265 3881 3545 1624 167 3 38 chr2 140505279 140505605 -112750978 - AluJo SINE Alu 0 321 6 634 246 97 97 chr2 140505609 140505936 -112750647 + L2 LINE L2 2686 3021 -292 2152 105 0 54 chr2 140505936 140506251 -112750332 - AluSx SINE Alu -14 298 1 634 246 97 97 chr2 140506251 140506543 -112750040 + L2 LINE L2 3021 3312 -1 382 322 62 11 chr2 140506609 140506786 -112749797 - MIR SINE MIR -36 226 41 348 304 72 41 chr2 140507170 140507364 -112749219 - MIR SINE MIR -2 260 61 932 233 125 45 chr2 140507570 140507969 -112748614 + LTR16A1 LTR ERVL 14 444 -13 320 192 58 77 chr2 140508353 140508457 -112748126 + MLT1K LTR MaLR 123 224 -364 1348 273 91 12 chr2 140508457 140508875 -112747708 + MER70B LTR ERVL 1 451 -127 276 279 54 88 chr2 140509044 140509248 -112747335 + MLT1K LTR MaLR 229 425 -163 1514 218 86 39 chr2 140509367 140509729 -112746854 + MLT1D LTR MaLR 127 505 0 185 284 0 78 chr2 140509734 140509836 -112746747 + MIR3 SINE MIR 114 207 -1 260 278 0 98 chr2 140510548 140510681 -112745902 - L2 LINE L2 -1 3312 3193 471 173 15 95 chr2 140510820 140510971 -112745612 + MER74B LTR ERVL 1 193 -421 1574 161 24 45 chr2 140510972 140511301 -112745282 - AluJb SINE Alu 0 347 25 1223 233 60 20 chr2 140511317 140511664 -112744919 + MER74B LTR ERVL 188 548 -74 405 168 63 11 chr2 140511581 140511676 -112744907 - MER88 LTR ERVL -286 178 79 * 534 224 25 82 chr2 140511758 140511966 -112744617 + MIR SINE MIR 8 211 -51 550 265 160 57 chr2 140512178 140512829 -112743754 - L2 LINE L2 0 3272 2565 279 188 31 47 chr2 140512829 140512893 -112743690 - MER5B DNA MER1_type -1 177 115 6508 175 26 3 chr2 140512894 140513364 -112743219 + L1P5 LINE L1 3920 4378 -1773 342 0 0 0 chr2 140513364 140513402 -112743181 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 6508 175 26 3 chr2 140513402 140514677 -112741906 + L1P5 LINE L1 4378 5709 -442 3702 116 142 16 chr2 140515272 140515899 -112740684 + MER39 LTR ERV1 1 706 -1 363 309 0 0 chr2 140516204 140516301 -112740282 + MIR3 SINE MIR 87 183 -25 297 169 77 146 chr2 140516479 140516609 -112739974 - MER5B DNA MER1_type -31 147 27 258 211 92 57 chr2 140516608 140516636 -112739947 - MER5B DNA MER1_type -28 161 135 * 2509 65 0 0 chr2 140516636 140516929 -112739654 + AluY SINE Alu 1 293 -18 258 211 92 57 chr2 140516929 140516996 -112739587 - MER5B DNA MER1_type -54 135 63 1115 203 104 55 chr2 140517285 140517723 -112738860 - LTR56 LTR ERV1 0 445 9 344 233 27 0 chr2 140517741 140517814 -112738769 - MER5A DNA MER1_type -111 78 4 323 271 197 0 chr2 140518102 140518224 -112738359 - MIR SINE MIR 0 262 117 1104 198 144 140 chr2 140518267 140518975 -112737608 + MER20B DNA MER1_type 21 735 -48 2171 116 3 0 chr2 140518975 140519306 -112737277 + AluSx SINE Alu 1 332 0 1104 198 144 140 chr2 140519306 140519332 -112737251 + MER20B DNA MER1_type 735 759 -24 1101 201 80 4 chr2 140519332 140519596 -112736987 + L1MC3 LINE L1 7481 7764 -21 2061 253 34 93 chr2 140519607 140520508 -112736075 + L1M2 LINE L1 718 1565 -6001 732 146 0 0 chr2 140520509 140520612 -112735971 - AluSq/x SINE Alu -210 103 1 985 79 14 7 chr2 140520612 140520752 -112735831 + L1PA14 LINE L1 6021 6161 0 196 267 58 58 chr2 140520999 140521119 -112735464 - MIR SINE MIR -20 242 123 625 226 0 9 chr2 140521813 140521928 -112734655 - MER81 DNA DNA 0 114 1 663 181 8 24 chr2 140521931 140522058 -112734525 + MER5B DNA MER1_type 40 164 -14 501 273 160 0 chr2 140522086 140522236 -112734347 - MER5A DNA MER1_type -6 183 10 244 282 86 25 chr2 140522607 140522770 -112733813 + L1ME3 LINE L1 5968 6140 -22 27 29 0 0 chr2 140522783 140522817 -112733766 + AT_rich Low_complexity Low_complexity 1 34 0 381 303 79 0 chr2 140524003 140524168 -112732415 - L1ME3A LINE L1 -5 6165 5988 346 192 64 13 chr2 140524508 140524586 -112731997 - L1ME3A LINE L1 -2030 5778 5697 360 288 72 68 chr2 140524632 140524953 -112731630 - MLT1L LTR MaLR -93 521 184 41633 70 7 3 chr2 140525130 140530820 -112725763 - L1P2 LINE L1 -436 5718 1 7986 196 38 19 chr2 140530821 140531612 -112724971 + L1M2 LINE L1 2190 2964 -4601 180 0 0 0 chr2 140531612 140531632 -112724951 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 7986 196 38 19 chr2 140531632 140533205 -112723378 + L1M2 LINE L1 2964 4505 -3060 1832 155 13 7 chr2 140533205 140533508 -112723075 + AluJb SINE Alu 1 305 -7 7986 196 38 19 chr2 140533508 140533798 -112722785 + L1M2 LINE L1 4505 4788 -2777 2503 168 18 25 chr2 140533798 140534233 -112722350 - MSTB1 LTR MaLR 0 432 1 7986 196 38 19 chr2 140534233 140534644 -112721939 + L1M2 LINE L1 4788 5316 -2249 2270 103 0 7 chr2 140534644 140534946 -112721637 + AluSc SINE Alu 1 300 -9 26 0 0 0 chr2 140537526 140537552 -112719031 + AT_rich Low_complexity Low_complexity 1 26 0 660 188 301 6 chr2 140539425 140539601 -112716982 - Charlie8 DNA MER1_type -2189 228 1 3997 123 0 39 chr2 140542741 140543376 -112713207 - MER4B LTR ERV1 0 610 1 350 150 17 0 chr2 140544112 140544172 -112712411 + AluS SINE Alu 1 61 -247 271 336 15 15 chr2 140544964 140545095 -112711488 - L2 LINE L2 0 3313 3183 240 279 89 0 chr2 140545729 140545808 -112710775 - L2 LINE L2 -1 3271 3186 288 234 62 86 chr2 140545990 140546118 -112710465 - MIR SINE MIR -50 212 88 1421 206 14 41 chr2 140548241 140548533 -112708050 + AluJb SINE Alu 6 289 -23 267 232 152 20 chr2 140548577 140548676 -112707907 + L2 LINE L2 3201 3312 -1 274 212 59 51 chr2 140549622 140549740 -112706843 - MIR SINE MIR -27 235 117 496 286 12 12 chr2 140550817 140550988 -112705595 - MIR SINE MIR -15 247 77 202 382 40 0 chr2 140551057 140551133 -112705450 - MIR SINE MIR -182 80 2 207 284 125 0 chr2 140554754 140554842 -112701741 - MIR SINE MIR -74 134 36 612 247 102 58 chr2 140555135 140555410 -112701173 - MARNA DNA Mariner -138 448 162 4800 177 45 26 chr2 140556133 140557615 -112698968 - L1MA9 LINE L1 -25 6287 4771 2118 133 11 41 chr2 140557739 140558108 -112698475 - L1MB4 LINE L1 -7 6173 5816 1422 193 49 18 chr2 140558110 140558395 -112698188 - AluJo SINE Alu -18 294 1 821 132 7 29 chr2 140558404 140558540 -112698043 - FLAM_C SINE Alu 0 133 1 795 176 69 48 chr2 140558582 140558800 -112697783 - L1MB4 LINE L1 -358 5822 5622 2486 196 82 7 chr2 140558804 140559408 -112697175 - L1MD3 LINE L1 0 7808 7159 360 194 0 0 chr2 140559484 140559546 -112697037 - L1MD3 LINE L1 -811 7184 7123 423 0 0 0 chr2 140561078 140561125 -112695458 + (TG)n Simple_repeat Simple_repeat 2 48 0 483 202 47 8 chr2 140562382 140562511 -112694072 - MER20B DNA MER1_type -74 709 576 761 292 9 9 chr2 140562697 140562930 -112693653 - MER20B DNA MER1_type -263 520 288 2101 143 7 3 chr2 140562938 140563238 -112693345 + AluSx SINE Alu 1 301 -11 552 319 27 5 chr2 140563252 140563437 -112693146 - MER20B DNA MER1_type -561 222 34 1255 193 74 39 chr2 140563523 140563808 -112692775 + AluJo SINE Alu 3 297 -15 247 275 32 29 chr2 140565308 140565497 -112691086 + MIR SINE MIR 33 262 0 210 285 65 86 chr2 140565691 140565877 -112690706 - L2 LINE L2 -214 3058 2877 1487 213 110 19 chr2 140566257 140566685 -112689898 - MLT1C LTR MaLR 0 467 1 511 214 63 19 chr2 140566742 140566901 -112689682 + L1MDa LINE L1 1665 1830 -4710 242 118 39 0 chr2 140566960 140567011 -112689572 + T-rich Low_complexity Low_complexity 3 55 0 184 361 0 0 chr2 140567182 140567243 -112689340 - MIR SINE MIR -108 100 40 312 127 0 0 chr2 140567841 140567896 -112688687 + (TTCC)n Simple_repeat Simple_repeat 3 57 0 293 284 64 0 chr2 140569543 140569652 -112686931 - L2 LINE L2 0 3272 3157 484 266 64 12 chr2 140569672 140569845 -112686738 - MIR SINE MIR -8 254 73 1046 191 26 26 chr2 140571043 140571273 -112685310 + MIR SINE MIR 21 250 -12 217 279 90 9 chr2 140571451 140571562 -112685021 - MIR SINE MIR -32 230 111 183 80 0 0 chr2 140572154 140572179 -112684404 + (GGAA)n Simple_repeat Simple_repeat 2 26 0 697 241 55 5 chr2 140574274 140574494 -112682089 + MIR SINE MIR 12 242 -20 725 250 40 40 chr2 140574547 140574624 -112681959 - L1MB8 LINE L1 0 6178 6102 840 256 162 19 chr2 140574624 140575050 -112681533 - L1MD3 LINE L1 -1878 6117 5631 482 281 78 39 chr2 140574804 140575085 -112681498 - L1PB1 LINE L1 -271 5880 5589 * 218 298 113 32 chr2 140576473 140576597 -112679986 + L2 LINE L2 3137 3270 -2 532 325 171 2 chr2 140576666 140577208 -112679375 + L2 LINE L2 2582 3222 -91 2107 117 3 7 chr2 140578626 140578925 -112677658 - AluSx SINE Alu -14 298 1 2013 144 3 0 chr2 140579374 140579666 -112676917 + AluSx SINE Alu 6 298 -14 1491 161 139 0 chr2 140579672 140579988 -112676595 + MER46B DNA MER2_type 1 235 -1 402 270 13 33 chr2 140580839 140580991 -112675592 - MIR SINE MIR -85 177 29 2204 112 0 0 chr2 140581050 140581337 -112675246 + AluSx SINE Alu 1 287 -25 4638 164 34 20 chr2 140581917 140582770 -112673813 + MER6 DNA MER2_type 1 865 0 2058 127 0 7 chr2 140584813 140585127 -112671456 - AluSx SINE Alu 0 312 1 218 143 0 24 chr2 140585716 140585758 -112670825 + MIR SINE MIR 108 148 -114 188 179 77 0 chr2 140585730 140585769 -112670814 + MIR3 SINE MIR 122 163 -45 * 211 262 19 9 chr2 140588685 140588792 -112667791 + (CATATA)n Simple_repeat Simple_repeat 5 112 0 508 297 90 9 chr2 140589013 140589235 -112667348 - MIR SINE MIR 0 262 18 416 300 0 33 chr2 140589913 140590132 -112666451 - L1MC4a LINE L1 -302 5819 5626 444 51 0 0 chr2 140592411 140592470 -112664113 + (TG)n Simple_repeat Simple_repeat 1 59 0 25 31 0 0 chr2 140594383 140594415 -112662168 + AT_rich Low_complexity Low_complexity 1 32 0 310 179 250 0 chr2 140594655 140594739 -112661844 + MIR SINE MIR 158 262 0 1456 233 120 12 chr2 140598482 140599084 -112657499 - L1MB7 LINE L1 0 6171 5460 406 276 259 4 chr2 140599958 140600190 -112656393 + L2 LINE L2 3009 3299 -14 225 329 59 0 chr2 140600286 140600371 -112656212 - MIR SINE MIR -105 157 68 283 253 101 20 chr2 140602068 140602167 -112654416 + L2 LINE L2 3183 3289 -24 358 331 39 26 chr2 140605934 140606088 -112650495 - MER5A DNA MER1_type -10 179 24 940 106 0 23 chr2 140606706 140606838 -112649745 + FLAM_C SINE Alu 3 131 -2 307 300 36 55 chr2 140606841 140606951 -112649632 - L1MC4 LINE L1 -1324 6718 6611 487 127 0 127 chr2 140608837 140608963 -112647620 + MLT1F1 LTR MaLR 2 111 -456 2644 210 36 2 chr2 140608964 140609545 -112647038 + L1MD3 LINE L1 7393 7993 -2 2114 166 14 3 chr2 140609758 140610119 -112646464 + MLT1A1 LTR MaLR 1 365 0 350 271 21 10 chr2 140611006 140611102 -112645481 + MIR SINE MIR 70 166 -96 364 232 53 11 chr2 140611139 140611234 -112645349 + MLT2F LTR ERVL 37 135 -528 763 285 88 10 chr2 140611305 140611691 -112644892 + MLT2F LTR ERVL 238 653 -10 2596 60 0 0 chr2 140611710 140612008 -112644575 + AluY SINE Alu 1 298 -13 1896 170 0 0 chr2 140612524 140612812 -112643771 + AluJo SINE Alu 1 288 -24 1592 172 41 80 chr2 140612837 140613226 -112643357 + MLT1A2 LTR MaLR 1 374 0 281 273 80 0 chr2 140613413 140613501 -112643082 - MIR SINE MIR -120 142 48 817 243 163 20 chr2 140613900 140614299 -112642284 + L1MC/D LINE L1 5255 5710 -2098 6849 218 73 43 chr2 140614303 140614888 -112641695 + L1ME1 LINE L1 2555 3121 -3045 2272 118 3 0 chr2 140614888 140615194 -112641389 + AluSp SINE Alu 1 307 -6 6849 218 73 43 chr2 140615194 140618115 -112638468 + L1ME1 LINE L1 3121 6162 -4 204 332 39 70 chr2 140618570 140618826 -112637757 + L2 LINE L2 2998 3245 -27 196 444 57 0 chr2 140618846 140618970 -112637613 - L2 LINE L2 -35 3237 3107 2165 160 25 10 chr2 140619501 140619894 -112636689 + MSTB LTR MaLR 1 399 -27 3405 175 92 6 chr2 140619895 140620587 -112635996 + MSTB-int LTR MaLR 35 786 -865 1282 189 4 21 chr2 140620607 140620850 -112635733 + MLT1A1 LTR MaLR 127 365 0 309 329 60 60 chr2 140621257 140621424 -112635159 - MIR3 SINE MIR -3 205 39 836 215 185 0 chr2 140621807 140622072 -112634511 + L2 LINE L2 2826 3139 -174 577 197 95 0 chr2 140622088 140622235 -112634348 - MER3 DNA MER1_type -48 161 1 968 218 78 36 chr2 140622481 140622812 -112633771 - L1ME2 LINE L1 0 6164 5820 2388 133 28 17 chr2 140622909 140623269 -112633314 + THE1B LTR MaLR 1 364 0 210 229 38 145 chr2 140625240 140625371 -112631212 - MIR SINE MIR -129 133 17 1968 114 24 14 chr2 140625496 140625785 -112630798 + AluSx SINE Alu 1 292 -20 587 180 83 75 chr2 140625803 140626031 -112630552 + HAL1 LINE L1 1307 1536 -971 1114 164 44 16 chr2 140626031 140626214 -112630369 + AluJo SINE Alu 1 188 -124 672 264 221 8 chr2 140626255 140626630 -112629953 + HAL1 LINE L1 2053 2507 0 1094 224 15 70 chr2 140626665 140626710 -112629873 - MLT2C1 LTR ERVL -1 396 350 2265 151 17 0 chr2 140626710 140627067 -112629516 - MER47A DNA MER2_type 0 366 4 1094 224 15 70 chr2 140627067 140627351 -112629232 - MLT2C1 LTR ERVL -47 350 85 483 315 67 58 chr2 140627922 140628268 -112628315 + L1ME LINE L1 3100 3448 -2698 437 301 100 0 chr2 140628383 140628622 -112627961 + L1ME LINE L1 3681 3943 -2203 1393 296 153 63 chr2 140628638 140629768 -112626815 + L1ME LINE L1 4010 5241 -905 1627 204 64 128 chr2 140629768 140630360 -112626223 + MLT2B3 LTR ERVL 1 554 0 517 262 130 47 chr2 140630373 140630864 -112625719 + L1ME LINE L1 5254 5798 -366 2124 120 3 20 chr2 140630925 140631224 -112625359 + AluSc SINE Alu 1 294 -15 392 331 145 0 chr2 140631627 140631772 -112624811 - L2 LINE L2 0 3272 3107 2374 224 74 28 chr2 140634068 140634996 -112621587 - L1ME1 LINE L1 -89 6077 5084 2405 104 7 0 chr2 140634996 140635305 -112621278 - AluSx SINE Alu -1 311 1 2374 224 74 28 chr2 140635305 140635594 -112620989 - L1ME1 LINE L1 -1082 5084 4810 392 271 271 0 chr2 140636297 140636463 -112620120 - MIR SINE MIR -44 218 8 1469 194 137 14 chr2 140637247 140637670 -112618913 + LTR54B LTR ERV1 2 476 -22 2457 84 0 0 chr2 140637698 140637995 -112618588 - AluSx SINE Alu -15 297 1 212 226 0 38 chr2 140638435 140638488 -112618095 + CT-rich Low_complexity Low_complexity 2 52 0 351 286 43 26 chr2 140639248 140639430 -112617153 - MIR SINE MIR -42 220 40 316 347 50 0 chr2 140639703 140639824 -112616759 - MIR SINE MIR -71 191 65 1742 69 138 40 chr2 140639988 140640264 -112616319 - AluSx SINE Alu -9 303 1 286 296 23 0 chr2 140640549 140640637 -112615946 + MIR SINE MIR 42 131 -77 26 30 0 0 chr2 140640800 140640833 -112615750 + AT_rich Low_complexity Low_complexity 1 33 0 328 281 137 36 chr2 140641603 140641852 -112614731 + MER102a DNA MER1_type 56 329 -1 2890 123 37 62 chr2 140642210 140642771 -112613812 + L1MA5A LINE L1 5749 6295 -2 200 182 0 0 chr2 140643671 140643704 -112612879 + (CA)n Simple_repeat Simple_repeat 2 34 0 337 223 107 19 chr2 140645015 140645118 -112611465 + MIR SINE MIR 60 171 -91 430 253 43 118 chr2 140646824 140647010 -112609573 + MER5B DNA MER1_type 1 172 -6 215 308 98 53 chr2 140648157 140648290 -112608293 - MIR3 SINE MIR -68 140 2 1985 113 3 0 chr2 140648687 140649011 -112607572 + AluSp SINE Alu 1 325 0 1188 147 5 16 chr2 140649021 140649212 -112607371 + MER5A DNA MER1_type 1 189 0 1599 151 37 4 chr2 140649216 140649488 -112607095 + AluJo SINE Alu 1 281 -31 303 49 0 0 chr2 140649488 140649529 -112607054 + (CA)n Simple_repeat Simple_repeat 1 41 0 707 216 150 0 chr2 140650768 140650935 -112605648 + MER3 DNA MER1_type 18 209 0 229 237 8 76 chr2 140651864 140651982 -112604601 - MER113 DNA MER1_type? -407 114 5 294 345 95 31 chr2 140651991 140652350 -112604233 - L2 LINE L2 -555 2759 2378 751 259 184 18 chr2 140652647 140653239 -112603344 - L2 LINE L2 -50 3263 2563 1926 139 0 3 chr2 140653810 140654098 -112602485 + AluSx SINE Alu 3 289 -23 242 291 34 43 chr2 140654104 140654221 -112602362 - L2 LINE L2 -230 3042 2927 218 179 119 30 chr2 140654221 140654288 -112602295 - L2 LINE L2 0 3272 3200 862 221 99 137 chr2 140654336 140655010 -112601573 - L2 LINE L2 -451 2863 2215 569 249 106 28 chr2 140655504 140655844 -112600739 - MLT1G1 LTR MaLR -226 329 1 548 139 105 111 chr2 140655932 140656104 -112600479 + MER30 DNA MER1_type 1 171 -59 384 311 132 24 chr2 140656374 140656663 -112599920 + MLT1I LTR MaLR 64 383 -26 339 254 193 10 chr2 140657132 140657329 -112599254 + L1ME4a LINE L1 5602 5834 -287 201 322 11 35 chr2 140657755 140657842 -112598741 + MIR SINE MIR 108 192 -70 2028 136 0 0 chr2 140657911 140658206 -112598377 + AluSx SINE Alu 1 295 -17 354 266 0 43 chr2 140658209 140658303 -112598280 - L1MC4 LINE L1 -1339 6703 6614 378 289 39 19 chr2 140658332 140658436 -112598147 + L1MC4 LINE L1 6589 6694 -1348 191 295 49 0 chr2 140659287 140659348 -112597235 + MIR3 SINE MIR 111 174 -34 2226 72 0 13 chr2 140661069 140661373 -112595210 + AluY SINE Alu 9 308 -3 988 140 6 0 chr2 140661377 140661541 -112595042 + AluSg/x SINE Alu 138 302 -10 309 283 209 23 chr2 140662013 140662190 -112594393 + MIR SINE MIR 21 230 -32 330 298 22 67 chr2 140662457 140662635 -112593948 - MER5B DNA MER1_type -3 175 6 2017 123 0 3 chr2 140662635 140662928 -112593655 - AluSc SINE Alu -17 292 1 1034 173 65 42 chr2 140662966 140663180 -112593403 + MER20 DNA MER1_type 1 219 0 246 240 77 58 chr2 140663716 140663820 -112592763 + MER5B DNA MER1_type 68 173 -5 945 189 86 0 chr2 140665484 140665659 -112590924 + MER20 DNA MER1_type 30 219 0 329 238 138 0 chr2 140665692 140665772 -112590811 + MER5A DNA MER1_type 13 103 -86 338 286 105 0 chr2 140665836 140665941 -112590642 - MER5B DNA MER1_type 0 178 63 5516 71 16 6 chr2 140666005 140666733 -112589850 - L1PA10 LINE L1 -10 6158 5423 264 254 0 28 chr2 140666733 140666796 -112589787 - MER5B DNA MER1_type -115 63 1 744 202 33 6 chr2 140666814 140666997 -112589586 + MER5A DNA MER1_type 2 189 0 261 319 0 0 chr2 140668870 140668939 -112587644 + (CATG)n Simple_repeat Simple_repeat 3 71 0 206 206 0 0 chr2 140668953 140668987 -112587596 + polypurine Low_complexity Low_complexity 3 36 0 188 152 30 0 chr2 140669395 140669428 -112587155 - L2 LINE L2 -260 3053 3020 597 361 77 4 chr2 140669973 140670233 -112586350 + L3 LINE CR1 323 601 -976 541 254 163 49 chr2 140670324 140670680 -112585903 + L1ME4a LINE L1 5530 5844 -277 1862 138 14 10 chr2 140670680 140670977 -112585606 + AluSx SINE Alu 1 298 -14 541 254 163 49 chr2 140670977 140671097 -112585486 + L1ME4a LINE L1 5844 5949 -172 1659 142 3 55 chr2 140671097 140671406 -112585177 + AluSx SINE Alu 1 293 -19 541 254 163 49 chr2 140671406 140671455 -112585128 + L1ME4a LINE L1 5949 6116 -5 1642 166 0 17 chr2 140671918 140672207 -112584376 - AluJb SINE Alu -28 284 1 4039 176 69 30 chr2 140672872 140673703 -112582880 - MER21B LTR ERV1 0 863 1 403 274 98 41 chr2 140674704 140674970 -112581613 + L1ME4a LINE L1 5650 5930 -191 303 306 145 19 chr2 140675298 140675675 -112580908 + L2 LINE L2 2705 3145 -168 2045 109 0 7 chr2 140676100 140676414 -112580169 + AluSx SINE Alu 1 312 0 684 147 168 1 chr2 140677142 140677295 -112579288 + L1MB1 LINE L1 5972 6147 -21 1973 134 16 0 chr2 140677348 140677653 -112578930 - AluSx SINE Alu -2 310 1 416 341 9 50 chr2 140678127 140678347 -112578236 + MIR SINE MIR 27 237 -25 1577 186 59 34 chr2 140678893 140679247 -112577336 - MLT1A2 LTR MaLR -11 363 1 1224 161 24 0 chr2 140679518 140679723 -112576860 + L1MB8 LINE L1 5417 5626 -552 1844 168 69 3 chr2 140679723 140680056 -112576527 + MLT1A1 LTR MaLR 1 355 -10 2133 184 22 74 chr2 140680056 140680648 -112575935 + L1MB8 LINE L1 5618 6178 0 340 294 59 10 chr2 140680682 140680784 -112575799 - MIR SINE MIR 0 262 156 244 348 36 27 chr2 140682236 140682348 -112574235 + MIR SINE MIR 1 113 -149 239 269 0 0 chr2 140682378 140682430 -112574153 + L2 LINE L2 3209 3260 -12 346 280 77 49 chr2 140682491 140682634 -112573949 - L2 LINE L2 -2 3270 3124 621 284 146 34 chr2 140682852 140683394 -112573189 + L1ME4a LINE L1 5352 5996 -125 366 80 0 0 chr2 140683394 140683444 -112573139 + (CA)n Simple_repeat Simple_repeat 2 51 0 621 284 146 34 chr2 140683444 140683567 -112573016 + L1ME4a LINE L1 5996 6104 -17 322 368 7 15 chr2 140683873 140684009 -112572574 - MIR SINE MIR -74 188 54 266 245 0 0 chr2 140684032 140684085 -112572498 - MLT1C LTR MaLR -3 464 412 785 131 0 0 chr2 140684122 140684229 -112572354 + Charlie3 DNA MER1_type 100 206 -2504 881 105 0 16 chr2 140684229 140684353 -112572230 + Charlie3 DNA MER1_type 2585 2706 -4 * 1795 198 49 10 chr2 140684351 140684756 -112571827 - MLT1C LTR MaLR -46 421 1 805 201 64 54 chr2 140686063 140686137 -112570446 - MER3 DNA MER1_type -3 206 134 2054 98 0 14 chr2 140686137 140686443 -112570140 + AluSx SINE Alu 1 302 0 805 201 64 54 chr2 140686443 140686571 -112570012 - MER3 DNA MER1_type -75 134 1 270 336 35 7 chr2 140686692 140686835 -112569748 - L1MC4a LINE L1 -1873 5935 5789 801 290 190 34 chr2 140686941 140687679 -112568904 + L2 LINE L2 303 1155 -2159 1718 112 70 0 chr2 140687728 140687987 -112568596 + L1MB2 LINE L1 5537 5813 -358 1999 116 3 7 chr2 140687989 140688292 -112568291 + AluSx SINE Alu 1 302 -10 1163 138 0 0 chr2 140688292 140688466 -112568117 + AluSg/x SINE Alu 134 307 -5 1999 147 19 19 chr2 140688466 140688840 -112567743 + L1MB2 LINE L1 5798 6171 0 916 154 157 31 chr2 140689777 140690063 -112566520 - MER33 DNA MER1_type -2 322 1 2366 118 31 3 chr2 140690251 140690600 -112565983 - MER46B DNA MER2_type 0 236 3 1857 139 14 0 chr2 140690984 140691272 -112565311 - AluSx SINE Alu -20 292 1 203 188 0 62 chr2 140691388 140691452 -112565131 + (CATATA)n Simple_repeat Simple_repeat 6 65 0 246 32 0 0 chr2 140691477 140691508 -112565075 + (TG)n Simple_repeat Simple_repeat 2 32 0 280 324 39 0 chr2 140691510 140691612 -112564971 - MIR SINE MIR -79 183 78 386 159 11 0 chr2 140692834 140692922 -112563661 + (TG)n Simple_repeat Simple_repeat 1 89 0 2187 109 7 0 chr2 140694285 140694588 -112561995 - AluSx SINE Alu -7 305 1 2191 88 7 10 chr2 140695771 140696077 -112560506 + AluSc SINE Alu 1 305 -4 22 0 0 0 chr2 140697354 140697376 -112559207 + AT_rich Low_complexity Low_complexity 1 22 0 1034 276 71 18 chr2 140697564 140697945 -112558638 + MLT1K LTR MaLR 188 588 0 276 299 92 29 chr2 140697952 140698126 -112558457 + L1ME4a LINE L1 5618 5802 -319 1670 161 0 4 chr2 140698174 140698453 -112558130 + AluJo SINE Alu 9 286 -26 540 295 111 5 chr2 140698617 140698824 -112557759 - L2 LINE L2 -247 3066 2838 289 245 21 32 chr2 140698873 140698967 -112557616 + L1ME4a LINE L1 5959 6051 -70 3109 128 123 49 chr2 140698969 140699580 -112557003 - MER4A LTR ERV1 0 664 9 232 247 147 74 chr2 140700704 140700894 -112555689 + MER102a DNA MER1_type 119 322 -8 699 255 151 58 chr2 140701588 140702000 -112554583 + L2 LINE L2 2829 3278 -35 1976 107 0 28 chr2 140702822 140703140 -112553443 - AluY SINE Alu -2 309 1 772 61 0 10 chr2 140703144 140703243 -112553340 - AluY SINE Alu -179 132 35 397 208 0 13 chr2 140703454 140703531 -112553052 - L2 LINE L2 -1 3312 3237 187 298 77 58 chr2 140703879 140703983 -112552600 + L2 LINE L2 3165 3270 -2 2410 248 99 57 chr2 140705032 140705401 -112551182 + L1ME3A LINE L1 4266 4618 -1552 1958 81 22 7 chr2 140705401 140705674 -112550909 + AluSx SINE Alu 1 277 -35 2410 248 99 57 chr2 140705674 140706584 -112549999 + L1ME3A LINE L1 4618 5488 -682 1936 142 7 0 chr2 140706584 140706886 -112549697 + AluSx SINE Alu 1 304 -8 2410 248 99 57 chr2 140706886 140706952 -112549631 + L1ME3A LINE L1 5488 5550 -620 2209 90 0 7 chr2 140706952 140707252 -112549331 + AluSx SINE Alu 1 298 -14 2410 248 99 57 chr2 140707252 140707722 -112548861 + L1ME3A LINE L1 5550 6157 -13 1856 124 11 4 chr2 140707927 140708201 -112548382 + AluSg SINE Alu 15 290 -20 327 308 56 15 chr2 140708323 140708518 -112548065 + L1ME LINE L1 5617 5819 -302 2056 121 3 0 chr2 140709039 140709344 -112547239 + AluSq SINE Alu 1 306 -7 335 283 92 0 chr2 140709844 140709871 -112546712 + HAL1 LINE L1 1083 1106 -3299 1980 129 10 6 chr2 140709871 140710182 -112546401 + AluSx SINE Alu 1 312 0 335 283 92 0 chr2 140710182 140710369 -112546214 + HAL1 LINE L1 1106 3199 -1206 4059 175 21 7 chr2 140711368 140712089 -112544494 + MER44D DNA MER2_type 1 603 -2 555 16 0 0 chr2 140712089 140712153 -112544430 + (CATATA)n Simple_repeat Simple_repeat 5 68 0 319 220 42 68 chr2 140712434 140712552 -112544031 + MLT1K LTR MaLR 353 467 -121 2935 191 11 28 chr2 140713158 140713730 -112542853 - MER68 LTR ERV1 0 562 1 269 224 158 0 chr2 140713759 140713835 -112542748 - MIR SINE MIR -78 130 43 381 301 42 72 chr2 140714125 140714318 -112542265 - MIR3 SINE MIR -6 202 16 1026 186 43 9 chr2 140715007 140715217 -112541366 + MER20 DNA MER1_type 1 217 -2 1902 119 3 7 chr2 140715917 140716212 -112540371 + AluJb SINE Alu 13 306 -6 448 310 41 18 chr2 140716428 140716599 -112539984 + MER91A DNA MER1_type 14 188 -8 183 297 99 55 chr2 140717066 140717157 -112539426 - L2 LINE L2 -52 3220 3126 1348 180 138 13 chr2 140719374 140719679 -112536904 - MER2 DNA MER2_type 0 344 2 210 176 0 0 chr2 140720381 140720432 -112536151 + (TG)n Simple_repeat Simple_repeat 1 51 0 321 303 214 11 chr2 140721288 140721466 -112535117 + MIR SINE MIR 25 238 -24 1934 124 0 3 chr2 140722257 140722548 -112534035 + AluSx SINE Alu 1 290 -22 255 118 0 0 chr2 140723934 140723968 -112532615 + LTR32 LTR ERVL 16 49 -422 1169 174 14 19 chr2 140723986 140724198 -112532385 + LTR32 LTR ERVL 261 471 0 569 300 72 52 chr2 140724755 140725005 -112531578 + MIR SINE MIR 8 262 0 429 219 342 26 chr2 140725341 140725692 -112530891 + L2 LINE L2 2833 3294 -19 294 291 48 9 chr2 140726461 140726570 -112530013 - MIR SINE MIR -68 140 33 764 153 0 0 chr2 140726796 140726907 -112529676 - FLAM_A SINE Alu -11 131 21 556 184 217 72 chr2 140726993 140727089 -112529494 + MIR SINE MIR 89 170 -92 2373 51 3 0 chr2 140727089 140727383 -112529200 + AluY SINE Alu 1 295 -16 556 184 217 72 chr2 140727383 140727438 -112529145 + MIR SINE MIR 170 262 0 21 0 0 0 chr2 140727518 140727539 -112529044 + AT_rich Low_complexity Low_complexity 1 21 0 2721 161 13 9 chr2 140727835 140728300 -112528283 - MLT1C LTR MaLR 0 467 1 1964 128 10 3 chr2 140728756 140729060 -112527523 + AluSx SINE Alu 1 306 -6 4748 87 11 2 chr2 140730866 140731495 -112525088 + MER41B LTR ERV1 1 635 0 360 274 26 26 chr2 140731794 140731907 -112524676 - MIR SINE MIR -89 173 61 4246 74 5 11 chr2 140732121 140732415 -112524168 - MER41A LTR ERV1 0 554 263 4036 88 47 9 chr2 140732415 140732963 -112523620 + MER61E LTR ERV1 1 569 0 4246 74 5 11 chr2 140732963 140733225 -112523358 - MER41A LTR ERV1 -291 263 1 3677 151 27 42 chr2 140733544 140734349 -112522234 - MER4D LTR ERV1 -8 895 4 225 261 23 34 chr2 140734388 140734476 -112522107 + L1MC4 LINE L1 6614 6700 -1342 207 0 0 0 chr2 140734497 140734520 -112522063 + (TAGA)n Simple_repeat Simple_repeat 2 24 0 180 261 0 0 chr2 140735843 140735908 -112520675 + GA-rich Low_complexity Low_complexity 1 65 0 380 55 18 0 chr2 140736479 140736534 -112520049 + (TC)n Simple_repeat Simple_repeat 1 56 0 2421 67 0 13 chr2 140737137 140737451 -112519132 - AluY SINE Alu -1 310 1 228 282 9 36 chr2 140737741 140737851 -112518732 + L1ME4a LINE L1 5950 6056 -65 225 306 163 0 chr2 140738906 140739053 -112517530 - MIR SINE MIR -78 184 14 699 223 8 0 chr2 140739516 140739646 -112516937 - MER5A DNA MER1_type -12 177 47 1608 202 80 42 chr2 140739646 140740072 -112516511 + MLT1D LTR MaLR 1 442 -63 766 159 65 7 chr2 140740077 140740254 -112516329 - AluJb SINE Alu 0 321 137 345 121 52 0 chr2 140740255 140740313 -112516270 + MLT1D LTR MaLR 437 497 -8 230 234 0 0 chr2 140740325 140740372 -112516211 - MER5A DNA MER1_type -142 47 1 2731 90 3 6 chr2 140740381 140740746 -112515837 - THE1B LTR MaLR 0 364 1 375 314 76 27 chr2 140740890 140741131 -112515452 + MIR SINE MIR 11 262 0 439 268 16 16 chr2 140741749 140741876 -112514707 - HAL1 LINE L1 -1837 670 544 472 265 176 20 chr2 140741876 140742080 -112514503 + MIR SINE MIR 16 251 -11 389 299 113 27 chr2 140742087 140742388 -112514195 + MARNA DNA Mariner 57 383 -203 770 306 54 0 chr2 140742395 140742653 -112513930 + MLT1J LTR MaLR 1 272 -239 276 245 147 37 chr2 140742876 140743039 -112513544 - MARNA DNA Mariner -392 194 14 701 122 0 0 chr2 140743765 140743872 -112512711 + AluSp/q SINE Alu 207 313 0 942 258 63 78 chr2 140744739 140745339 -112511244 + MLT1G1 LTR MaLR 5 595 0 780 255 34 21 chr2 140746976 140747211 -112509372 + MIR SINE MIR 25 262 0 1199 190 134 4 chr2 140747646 140747893 -112508690 - AluJo SINE Alu -33 279 1 2680 174 34 4 chr2 140748681 140749153 -112507430 + MLT1D LTR MaLR 20 505 0 274 313 0 0 chr2 140749221 140749304 -112507279 + L1MC/D LINE L1 5738 5820 -1988 232 238 0 32 chr2 140749410 140749473 -112507110 - L1ME LINE L1 -206 5915 5855 2701 132 4 43 chr2 140749522 140749557 -112507026 + MER65A LTR ERV1 1 36 -409 2112 102 27 3 chr2 140749557 140749703 -112506880 - AluSc SINE Alu -8 301 160 216 0 0 0 chr2 140749703 140749727 -112506856 + (CG)n Simple_repeat Simple_repeat 2 25 0 2112 102 27 3 chr2 140749727 140749874 -112506709 - AluSc SINE Alu -149 160 1 2701 132 4 43 chr2 140749874 140750301 -112506282 + MER65A LTR ERV1 36 445 0 835 205 70 20 chr2 140751301 140751501 -112505082 + MER63A DNA MER1_type 1 210 0 1116 179 11 74 chr2 140751695 140751980 -112504603 - L1MB8 LINE L1 0 6178 5912 230 256 41 41 chr2 140753787 140753907 -112502676 + MIR SINE MIR 1 120 -88 190 234 0 0 chr2 140753964 140754011 -112502572 + L2 LINE L2 3226 3272 0 259 248 112 47 chr2 140754834 140755009 -112501574 - MIR SINE MIR -27 181 43 23 78 0 0 chr2 140755450 140755501 -112501082 + AT_rich Low_complexity Low_complexity 1 51 0 555 119 0 0 chr2 140755601 140755685 -112500898 + AluJ/FRAM SINE Alu 216 299 -13 400 193 282 9 chr2 140755977 140756156 -112500427 + MIR SINE MIR 20 239 -23 183 204 0 0 chr2 140756713 140756757 -112499826 + CT-rich Low_complexity Low_complexity 2 45 0 1024 209 10 0 chr2 140757276 140757477 -112499106 - MER105 DNA DNA -1 203 1 2137 114 90 3 chr2 140757792 140758126 -112498457 + L1MC/D LINE L1 5424 5786 -547 1468 27 11 16 chr2 140758227 140758414 -112498169 + L1PA6 LINE L1 5969 6154 0 320 329 68 52 chr2 140758436 140758819 -112497764 + L1MC4a LINE L1 5015 5403 -743 1134 266 131 35 chr2 140758833 140759292 -112497291 + L1MC4a LINE L1 5439 5941 -1867 210 235 35 71 chr2 140759472 140759557 -112497026 - MIR3 SINE MIR -13 195 114 2381 157 119 2 chr2 140759587 140760039 -112496544 - MLT1D LTR MaLR 0 505 1 2645 146 83 21 chr2 140760130 140760611 -112495972 + MER41E LTR ERV1 1 511 -1 1668 250 91 53 chr2 140760642 140761671 -112494912 - L2 LINE L2 -56 3257 2193 3640 134 37 25 chr2 140761673 140762301 -112494282 - MER41B LTR ERV1 0 635 1 333 318 57 0 chr2 140762445 140762621 -112493962 - L1ME4a LINE L1 0 6121 5936 314 296 211 0 chr2 140763563 140763705 -112492878 + MIR SINE MIR 19 190 -72 402 261 31 8 chr2 140764588 140764718 -112491865 + MLT1L LTR MaLR 114 246 -369 619 287 75 5 chr2 140764799 140764987 -112491596 + MLT1L LTR MaLR 349 549 -66 390 200 12 0 chr2 140765017 140765102 -112491481 + MLT1L LTR MaLR 530 615 0 556 279 54 0 chr2 140765494 140765641 -112490942 + MER91A DNA MER1_type 35 189 -7 212 243 75 37 chr2 140766256 140766363 -112490220 - L2 LINE L2 -229 3043 2933 4901 137 33 30 chr2 140766706 140766991 -112489592 + L1MA4 LINE L1 3883 4166 -1980 1810 194 0 0 chr2 140766991 140767301 -112489282 + AluJb SINE Alu 3 312 0 4901 137 33 30 chr2 140767301 140767928 -112488655 + L1MA4 LINE L1 4166 4798 -1348 1150 147 0 0 chr2 140767928 140768098 -112488485 + AluSg/x SINE Alu 135 304 -6 3250 147 13 21 chr2 140768098 140769097 -112487486 + L1MA4 LINE L1 4788 5779 -521 1166 122 161 0 chr2 140769097 140769415 -112487168 + AluSg/x SINE Alu 73 419 0 2867 138 24 8 chr2 140769621 140770129 -112486454 + L1MA4 LINE L1 5774 6289 -11 744 179 17 29 chr2 140770629 140770802 -112485781 + MER5B DNA MER1_type 8 178 0 1822 161 6 29 chr2 140770833 140771149 -112485434 + AluJb SINE Alu 1 309 -3 2305 97 3 10 chr2 140771861 140772171 -112484412 + AluSx SINE Alu 3 310 -2 242 313 143 7 chr2 140772188 140772335 -112484248 + L2 LINE L2 2446 2612 -702 446 252 97 35 chr2 140772456 140772582 -112484001 - MIR SINE MIR -16 246 99 887 267 141 32 chr2 140772582 140773137 -112483446 + MLT1L LTR MaLR 1 615 0 446 252 97 35 chr2 140773137 140773214 -112483369 - MIR SINE MIR -163 99 28 2098 116 22 10 chr2 140774043 140774354 -112482229 + MER49 LTR ERV1 180 494 -429 21 0 0 0 chr2 140774495 140774516 -112482067 + AT_rich Low_complexity Low_complexity 1 21 0 1022 261 69 71 chr2 140774535 140774944 -112481639 + HAL1 LINE L1 574 983 -1524 1973 146 0 3 chr2 140774944 140775238 -112481345 + AluJb SINE Alu 5 297 -15 1022 261 69 71 chr2 140775238 140775433 -112481150 + HAL1 LINE L1 983 1177 -1330 2037 267 89 21 chr2 140775462 140776373 -112480210 + HAL1 LINE L1 1461 2433 -74 667 298 111 27 chr2 140776453 140776822 -112479761 - L1MEd LINE L1 -5209 910 511 287 243 102 40 chr2 140776827 140777004 -112479579 + LTR16A1 LTR ERVL 4 191 -266 230 270 82 61 chr2 140777030 140777226 -112479357 + LTR16A LTR ERVL 249 448 -2 271 254 37 116 chr2 140777226 140777415 -112479168 - L1MEd LINE L1 -5604 515 342 1907 121 3 48 chr2 140777462 140777504 -112479079 + MLT1B LTR MaLR 1 43 -347 2388 87 0 3 chr2 140777504 140777802 -112478781 + AluSx SINE Alu 1 297 -15 1907 121 3 48 chr2 140777802 140778073 -112478510 + MLT1B LTR MaLR 43 300 -90 265 318 107 54 chr2 140779103 140779383 -112477200 - L2 LINE L2 -171 3101 2807 2059 121 42 0 chr2 140780475 140780764 -112475819 - AluSx SINE Alu -11 301 1 21 36 0 0 chr2 140781028 140781056 -112475527 + AT_rich Low_complexity Low_complexity 1 28 0 1045 180 30 34 chr2 140781216 140781449 -112475134 - L1M3f LINE L1 -5042 286 55 301 298 80 26 chr2 140781930 140782081 -112474502 + L2 LINE L2 2469 2627 -687 3682 209 38 10 chr2 140782111 140782988 -112473595 - L1MB7 LINE L1 -10 6174 5274 1496 180 46 55 chr2 140782975 140783341 -112473242 - L1MB7 LINE L1 -1868 4278 3916 * 300 239 152 22 chr2 140783362 140783500 -112473083 - MLT2E LTR ERVL -57 571 416 2117 137 0 0 chr2 140783586 140783885 -112472698 - AluSx SINE Alu -13 299 1 4008 136 22 3 chr2 140783891 140784532 -112472051 - L1MB3 LINE L1 0 6183 5531 234 62 0 0 chr2 140784571 140784603 -112471980 + (T)n Simple_repeat Simple_repeat 1 32 0 2110 146 0 9 chr2 140784741 140785056 -112471527 - AluSx SINE Alu 0 312 1 2349 196 5 16 chr2 140785056 140785501 -112471082 + MER49 LTR ERV1 484 923 0 2328 105 0 0 chr2 140785527 140785821 -112470762 + AluSx SINE Alu 1 294 -18 2473 74 0 0 chr2 140785825 140786122 -112470461 + AluY SINE Alu 1 297 -14 318 286 87 16 chr2 140786144 140786270 -112470313 + L2 LINE L2 3179 3313 0 333 0 0 0 chr2 140786384 140786421 -112470162 + (TTG)n Simple_repeat Simple_repeat 2 38 0 339 235 78 10 chr2 140786474 140786576 -112470007 - MER91C DNA MER1_type -26 114 6 407 309 34 43 chr2 140787672 140787905 -112468678 + L1MC4a LINE L1 5617 5847 -1961 1493 171 52 28 chr2 140787983 140788270 -112468313 + AluJo SINE Alu 1 294 -18 696 188 8 16 chr2 140788465 140788593 -112467990 + FLAM_C SINE Alu 1 127 -6 22 35 0 0 chr2 140788593 140788622 -112467961 + AT_rich Low_complexity Low_complexity 1 29 0 501 244 16 0 chr2 140788812 140788939 -112467644 + MER5B DNA MER1_type 50 178 0 360 246 62 39 chr2 140788970 140789100 -112467483 + MER5A DNA MER1_type 1 133 -56 2372 149 15 13 chr2 140789361 140789704 -112466879 - MLT1B LTR MaLR 0 390 44 2531 141 62 0 chr2 140789704 140790107 -112466476 - MSTA LTR MaLR 0 428 1 2372 149 15 13 chr2 140790107 140790152 -112466431 - MLT1B LTR MaLR -346 44 1 328 192 58 77 chr2 140790164 140790268 -112466315 + MLT1K LTR MaLR 123 224 -364 1080 199 53 38 chr2 140790555 140790817 -112465766 + MLT1-int LTR MaLR 395 660 -711 438 20 0 0 chr2 140790840 140790891 -112465692 + (TAG)n Simple_repeat Simple_repeat 2 52 0 512 278 115 38 chr2 140790968 140791512 -112465071 - L1MEd LINE L1 -4646 1664 1043 270 248 97 0 chr2 140791516 140791629 -112464954 - L1MEd LINE L1 -5101 1018 895 492 314 5 22 chr2 140791645 140791830 -112464753 - L1MEd LINE L1 -5336 783 602 1465 232 108 35 chr2 140791845 140792271 -112464312 + MSTB2 LTR MaLR 1 457 0 311 262 121 97 chr2 140792344 140792550 -112464033 - L1MEd LINE L1 -5647 472 262 736 282 32 9 chr2 140792572 140792792 -112463791 + MIR SINE MIR 28 252 -10 221 167 24 0 chr2 140793281 140793323 -112463260 + L2 LINE L2 3230 3272 0 922 125 0 29 chr2 140793326 140793462 -112463121 + FLAM_C SINE Alu 2 133 0 261 0 0 0 chr2 140793898 140793927 -112462656 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 234 0 0 0 chr2 140795691 140795717 -112460866 + (A)n Simple_repeat Simple_repeat 1 26 0 1335 172 103 8 chr2 140795934 140796195 -112460388 + MLT1A1 LTR MaLR 2 287 -78 2069 73 8 0 chr2 140796293 140796552 -112460031 - L1PB1 LINE L1 -2 6149 5889 503 318 11 6 chr2 140797987 140798166 -112458417 + (CCA)n Simple_repeat Simple_repeat 1 180 0 186 317 43 56 chr2 140798205 140798366 -112458217 - MIR SINE MIR -35 227 69 244 254 0 14 chr2 140798479 140798550 -112458033 + GA-rich Low_complexity Low_complexity 3 72 0 195 129 0 0 chr2 140799622 140799653 -112456930 + (ATATG)n Simple_repeat Simple_repeat 3 33 0 483 286 41 12 chr2 140799695 140799866 -112456717 + MER112 DNA MER1_type 1 176 -84 1197 210 164 47 chr2 140799871 140800299 -112456284 - LTR16C LTR ERVL -13 478 1 380 214 0 34 chr2 140800306 140800394 -112456189 + MER112 DNA MER1_type 169 253 -7 264 211 0 118 chr2 140800394 140800470 -112456113 - MER113 DNA MER1_type? -2 519 453 416 19 19 0 chr2 140801032 140801085 -112455498 + (TC)n Simple_repeat Simple_repeat 1 54 0 871 162 48 0 chr2 140801755 140801922 -112454661 + MER5A DNA MER1_type 1 175 -14 1471 171 4 19 chr2 140801939 140802197 -112454386 - AluJo SINE Alu -23 289 36 190 120 0 0 chr2 140802198 140802223 -112454360 + MER5A DNA MER1_type 165 189 0 735 296 168 14 chr2 140802233 140802785 -112453798 - L2 LINE L2 0 3272 2623 524 51 25 0 chr2 140802924 140803003 -112453580 + (TAGA)n Simple_repeat Simple_repeat 2 82 0 7665 38 56 0 chr2 140803003 140803365 -112453218 - L1PA7 LINE L1 -17 6137 5797 2374 109 3 0 chr2 140803365 140803677 -112452906 - AluSp SINE Alu 0 313 1 7665 38 56 0 chr2 140803677 140804398 -112452185 - L1PA7 LINE L1 -357 5797 5044 180 77 0 0 chr2 140804869 140804895 -112451688 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 324 0 0 0 chr2 140805490 140805526 -112451057 + (CA)n Simple_repeat Simple_repeat 2 37 0 255 131 0 98 chr2 140805586 140805647 -112450936 + MLT1B LTR MaLR 1 55 -335 472 232 0 124 chr2 140805651 140805791 -112450792 - MER112 DNA MER1_type -89 171 60 2162 126 3 0 chr2 140805791 140806093 -112450490 - AluSq SINE Alu -10 303 1 472 232 0 124 chr2 140806093 140806146 -112450437 - MER112 DNA MER1_type -200 60 2 29 47 0 0 chr2 140806170 140806213 -112450370 + AT_rich Low_complexity Low_complexity 1 43 0 5095 124 6 41 chr2 140806315 140806975 -112449608 - L1PA16 LINE L1 -9 6157 5530 2087 116 17 0 chr2 140806975 140807268 -112449315 - AluSx SINE Alu -14 298 1 5095 124 6 41 chr2 140807268 140807439 -112449144 - L1PA16 LINE L1 -636 5530 5355 329 268 10 21 chr2 140807562 140807659 -112448924 - LTR33 LTR ERVL 0 521 426 780 306 26 48 chr2 140807660 140808118 -112448465 - L2 LINE L2 -471 2843 2396 2284 97 7 13 chr2 140808408 140808717 -112447866 + AluSx SINE Alu 1 307 -5 247 184 0 0 chr2 140808831 140808869 -112447714 - LTR16A LTR ERVL -5 445 408 339 264 113 19 chr2 140809515 140809621 -112446962 + MIR3 SINE MIR 50 165 -43 1073 304 87 44 chr2 140809798 140810325 -112446258 - LTR67 LTR ERVL -2 555 6 429 270 20 40 chr2 140810326 140810478 -112446105 - MIR SINE MIR -112 150 2 476 296 177 38 chr2 140810649 140811118 -112445465 - LTR67 LTR ERVL -2 555 22 644 250 36 101 chr2 140811591 140811839 -112444744 - MIR SINE MIR -2 260 29 1642 147 69 0 chr2 140811957 140812355 -112444228 - L1M2 LINE L1 -735 5577 5153 3597 156 55 70 chr2 140812355 140812683 -112443900 - L1M2 LINE L1 -1431 4715 4383 2157 119 0 17 chr2 140812683 140812985 -112443598 + AluSg SINE Alu 2 298 -12 3597 156 55 70 chr2 140812985 140813496 -112443087 - L1M2 LINE L1 -1763 4383 3889 4453 119 29 6 chr2 140813498 140814181 -112442402 + L1MA8 LINE L1 5587 6285 -6 301 212 0 61 chr2 140814358 140814424 -112442159 + MIR3 SINE MIR 126 187 -21 24 91 0 0 chr2 140815134 140815200 -112441383 + AT_rich Low_complexity Low_complexity 1 66 0 1838 136 0 0 chr2 140815537 140815801 -112440782 + AluSx SINE Alu 33 296 -16 32 19 0 37 chr2 140816233 140816262 -112440321 + AT_rich Low_complexity Low_complexity 1 29 -23 1705 174 3 33 chr2 140816262 140816561 -112440022 + AluJo SINE Alu 1 290 -22 32 19 0 37 chr2 140816561 140816585 -112439998 + AT_rich Low_complexity Low_complexity 29 52 0 595 170 0 0 chr2 140816922 140817022 -112439561 - MIR SINE MIR -4 258 159 240 132 11 0 chr2 140817709 140817755 -112438828 + Charlie5 DNA MER1_type 1 42 -2570 1885 148 7 10 chr2 140819509 140819807 -112436776 + AluSx SINE Alu 1 297 -15 310 161 119 59 chr2 140819834 140819952 -112436631 - L1ME4a LINE L1 -3 6118 5994 322 279 18 9 chr2 140820040 140820151 -112436432 - L1ME4a LINE L1 -267 5854 5743 293 247 50 33 chr2 140820190 140820318 -112436265 + L1MC5 LINE L1 7810 7995 0 597 285 79 23 chr2 140821350 140821564 -112435019 + MIR SINE MIR 37 262 0 1164 95 38 0 chr2 140821651 140821809 -112434774 + L1PA15 LINE L1 5999 6162 -3 399 287 66 7 chr2 140823421 140823557 -112433026 - MIR SINE MIR -93 169 26 2238 139 0 0 chr2 140823963 140824272 -112432311 - AluSx SINE Alu -3 309 1 542 295 35 17 chr2 140824386 140824559 -112432024 + MIR3 SINE MIR 32 207 -1 2154 95 0 11 chr2 140824717 140825027 -112431556 - AluSx SINE Alu 0 307 1 501 211 66 59 chr2 140825082 140825221 -112431362 - L2 LINE L2 0 3313 3171 189 0 0 0 chr2 140825221 140825242 -112431341 + (TA)n Simple_repeat Simple_repeat 1 21 0 501 211 66 59 chr2 140825242 140825254 -112431329 - L2 LINE L2 -142 3171 3161 359 277 23 69 chr2 140825259 140825389 -112431194 - L2 LINE L2 -532 2782 2659 351 174 339 0 chr2 140825858 140825973 -112430610 - MIR SINE MIR 0 262 109 185 321 36 0 chr2 140826086 140826170 -112430413 - MIR SINE MIR -120 142 56 1723 169 118 28 chr2 140826590 140826946 -112429637 - MLT1B LTR MaLR -2 388 1 384 208 0 154 chr2 140827057 140827187 -112429396 + MER102b DNA MER1_type 231 340 -1 285 51 0 0 chr2 140827189 140827228 -112429355 + (CA)n Simple_repeat Simple_repeat 2 40 0 273 277 85 81 chr2 140827251 140827475 -112429108 - L1ME LINE L1 -229 5892 5665 2017 138 0 10 chr2 140827475 140827771 -112428812 - AluSc SINE Alu -16 293 1 273 277 85 81 chr2 140827771 140827817 -112428766 - L1ME LINE L1 -456 5665 5621 287 330 11 23 chr2 140828474 140828562 -112428021 + MIR SINE MIR 2 88 -174 1167 252 113 65 chr2 140829973 140830532 -112426051 + HAL1 LINE L1 1809 2407 -100 1644 159 34 0 chr2 140830532 140830796 -112425787 - AluJb SINE Alu -29 283 11 1167 252 113 65 chr2 140830796 140830902 -112425681 + HAL1 LINE L1 2407 2506 -1 1570 204 33 66 chr2 140831294 140831320 -112425263 - MLT1F LTR MaLR -3 539 514 7728 116 41 32 chr2 140831320 140832304 -112424279 - Tigger3b DNA MER2_type -1797 1231 232 1930 138 39 0 chr2 140832304 140832587 -112423996 - AluSx SINE Alu -18 294 1 7728 116 41 32 chr2 140832587 140832822 -112423761 - Tigger3b DNA MER2_type -2796 232 1 1570 204 33 66 chr2 140832822 140833187 -112423396 - MLT1F LTR MaLR -28 514 161 215 279 0 0 chr2 140833194 140833237 -112423346 + polypurine Low_complexity Low_complexity 2 44 0 934 213 15 40 chr2 140833240 140833442 -112423141 - MLT1F LTR MaLR -370 197 1 664 293 68 101 chr2 140833443 140833835 -112422748 - MLT1F-int LTR MaLR -1 1370 1010 1971 160 0 0 chr2 140833835 140834141 -112422442 - AluJb SINE Alu -6 306 1 664 293 68 101 chr2 140834141 140834450 -112422133 - MLT1F-int LTR MaLR -361 1010 692 248 114 0 0 chr2 140834689 140834724 -112421859 - Charlie3 DNA MER1_type -2675 35 1 503 270 36 25 chr2 140834741 140834996 -112421587 - MLT1F-int LTR MaLR -1380 355 1 757 196 12 31 chr2 140834996 140835159 -112421424 - MLT1F1 LTR MaLR 0 567 408 3251 232 109 35 chr2 140835179 140836283 -112420300 - HAL1 LINE L1 -469 2038 854 604 176 10 0 chr2 140836339 140836441 -112420142 + L1MB5 LINE L1 6066 6168 -6 2003 137 3 7 chr2 140836515 140836814 -112419769 - AluSx SINE Alu -14 298 1 902 99 20 46 chr2 140837244 140837361 -112419222 + AluSq SINE Alu 26 140 -173 2051 133 0 0 chr2 140837361 140837647 -112418936 + AluSx SINE Alu 13 298 -14 902 99 20 46 chr2 140837647 140837680 -112418903 + AluSq SINE Alu 140 172 -141 397 248 85 16 chr2 140837834 140837963 -112418620 + MIR SINE MIR 50 187 -75 195 318 0 15 chr2 140838001 140838067 -112418516 + L2 LINE L2 3204 3268 -4 1504 160 45 35 chr2 140839025 140839312 -112417271 - AluJo SINE Alu -22 290 1 23 0 0 0 chr2 140840396 140840419 -112416164 + AT_rich Low_complexity Low_complexity 1 23 0 1933 157 0 0 chr2 140840427 140840714 -112415869 + AluSx SINE Alu 1 287 -25 867 93 24 8 chr2 140840714 140840961 -112415622 + (TA)n Simple_repeat Simple_repeat 1 251 0 311 336 27 0 chr2 140841514 140841624 -112414959 - L2 LINE L2 -556 2758 2646 4087 223 63 39 chr2 140841624 140841759 -112414824 + L1ME2 LINE L1 3808 3938 -2226 2454 56 7 3 chr2 140841759 140842061 -112414522 - AluY SINE Alu -8 303 1 4087 223 63 39 chr2 140842061 140842912 -112413671 + L1ME2 LINE L1 3938 4768 -1396 2064 142 7 0 chr2 140842912 140843214 -112413369 - AluSx SINE Alu -8 304 1 4087 223 63 39 chr2 140843214 140844527 -112412056 + L1ME2 LINE L1 4768 6164 0 1251 247 63 9 chr2 140844538 140844967 -112411616 + L1MC4a LINE L1 6373 6824 -984 913 198 121 44 chr2 140844968 140845241 -112411342 - MER2 DNA MER2_type 0 345 52 3211 237 48 30 chr2 140845254 140846369 -112410214 + L1MC4 LINE L1 6908 8042 0 2044 195 16 12 chr2 140846453 140846941 -112409642 - L1P5 LINE L1 -804 6404 5915 1987 112 26 6 chr2 140846932 140847271 -112409312 + L1P5 LINE L1 6389 6734 -484 * 6457 214 122 8 chr2 140849029 140850700 -112405883 - L1 LINE L1 -5348 1861 1 2097 129 3 7 chr2 140850858 140851161 -112405422 + AluSg SINE Alu 1 302 -8 1148 189 0 66 chr2 140851279 140851506 -112405077 - AluJb SINE Alu -16 296 85 533 89 13 13 chr2 140851506 140851585 -112404998 - AluY SINE Alu -62 249 171 1141 107 0 0 chr2 140851694 140851844 -112404739 - AluSq/x SINE Alu -162 150 1 2659 165 70 74 chr2 140851893 140852620 -112403963 - L1MB7 LINE L1 -22 6162 5439 2202 205 72 34 chr2 140852616 140852863 -112403720 - L1MB7 LINE L1 -925 5221 4985 * 2251 90 10 0 chr2 140852863 140853153 -112403430 - AluY SINE Alu -16 295 3 2202 205 72 34 chr2 140853153 140853553 -112403030 - L1MB7 LINE L1 -1161 4985 4549 628 193 0 0 chr2 140853653 140853767 -112402816 - FLAM_A SINE Alu -3 139 26 1894 110 38 54 chr2 140853877 140854194 -112402389 - AluSx SINE Alu 0 312 1 28 0 0 0 chr2 140854442 140854470 -112402113 + AT_rich Low_complexity Low_complexity 1 28 0 6879 56 8 13 chr2 140855705 140857211 -112399372 - SVA Other Other -799 1343 1 11342 166 42 88 chr2 140857212 140858398 -112398185 - L1M2 LINE L1 -811 6191 4953 2444 83 0 3 chr2 140858398 140858700 -112397883 - AluY SINE Alu -10 301 1 11342 166 42 88 chr2 140858700 140859759 -112396824 - L1M2 LINE L1 -2049 4953 3848 2860 95 11 16 chr2 140859759 140860210 -112396373 - L1MA1 LINE L1 0 6302 5854 11342 166 42 88 chr2 140860210 140860298 -112396285 - L1M2 LINE L1 -3154 3848 3758 1198 198 95 4 chr2 140860298 140860540 -112396043 - AluJo SINE Alu -48 264 1 11342 166 42 88 chr2 140860540 140861796 -112394787 - L1M2 LINE L1 -3244 3758 2469 2188 136 3 0 chr2 140861796 140862104 -112394479 - AluSp SINE Alu -4 309 1 11342 166 42 88 chr2 140862104 140862602 -112393981 - L1M2 LINE L1 -4533 2469 1950 820 154 0 7 chr2 140862603 140862746 -112393837 - L1M2 LINE L1 -5203 1646 1505 3750 154 25 4 chr2 140862849 140863561 -112393022 + L1PB4 LINE L1 5417 6143 -13 360 0 0 0 chr2 140863797 140863837 -112392746 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 714 256 17 6 chr2 140863909 140864081 -112392502 - LTR33 LTR ERVL -343 178 5 308 301 0 44 chr2 140864176 140864289 -112392294 - L2 LINE L2 -947 2367 2260 1675 147 85 4 chr2 140864544 140864816 -112391767 - AluJo SINE Alu -12 300 7 925 178 16 73 chr2 140864970 140865217 -112391366 + L1MB7 LINE L1 1537 1769 -4615 * 1909 234 30 20 chr2 140865215 140865923 -112390660 + L1MB7 LINE L1 3134 3848 -2534 * 2906 184 46 17 chr2 140865914 140866380 -112390203 + L1MB7 LINE L1 4185 4636 -1774 1881 129 11 4 chr2 140866380 140866651 -112389932 + AluY SINE Alu 23 295 -16 284 37 74 0 chr2 140866651 140866705 -112389878 + (TA)n Simple_repeat Simple_repeat 2 59 0 2906 184 46 17 chr2 140866705 140866913 -112389670 + L1MB7 LINE L1 4636 4836 -1574 2274 119 0 0 chr2 140866913 140867207 -112389376 + AluSq SINE Alu 1 294 -19 2906 184 46 17 chr2 140867207 140868128 -112388455 + L1MB7 LINE L1 4836 5880 -530 1374 160 36 91 chr2 140868129 140868491 -112388092 + L1MB7 LINE L1 6063 6404 -16 356 261 92 77 chr2 140868700 140868907 -112387676 - L1MC/D LINE L1 -1985 5823 5614 390 325 67 0 chr2 140868951 140869071 -112387512 + L2 LINE L2 3139 3266 -6 240 154 0 0 chr2 140869188 140869240 -112387343 + T-rich Low_complexity Low_complexity 1 52 0 21 71 0 0 chr2 140869359 140869401 -112387182 + AT_rich Low_complexity Low_complexity 1 42 0 301 211 107 7 chr2 140871082 140871224 -112385359 + L1MC4a LINE L1 5754 5822 -299 24 0 0 0 chr2 140871422 140871446 -112385137 + AT_rich Low_complexity Low_complexity 1 24 0 3054 145 14 8 chr2 140871473 140871991 -112384592 + Tigger7 DNA MER2_type 2 522 -1965 373 192 179 0 chr2 140871990 140872068 -112384515 + Tigger7 DNA MER2_type 2396 2487 0 * 251 387 48 0 chr2 140872102 140872226 -112384357 - MIR3 SINE MIR -74 134 5 314 311 34 67 chr2 140874620 140874739 -112381844 - L2 LINE L2 -17 3255 3141 263 290 0 0 chr2 140874748 140874810 -112381773 + GA-rich Low_complexity Low_complexity 3 64 0 995 136 14 0 chr2 140875080 140875266 -112381317 - AluSc SINE Alu 0 319 132 2096 112 11 0 chr2 140875266 140875553 -112381030 - AluSc SINE Alu -19 290 1 402 217 159 125 chr2 140875572 140875659 -112380924 - L2 LINE L2 -556 2758 2675 1703 140 31 75 chr2 140875659 140875981 -112380602 + AluJo SINE Alu 5 312 0 402 217 159 125 chr2 140875981 140876188 -112380395 - L2 LINE L2 -639 2675 2454 303 259 0 0 chr2 140876226 140876311 -112380272 - L1ME LINE L1 -339 5782 5698 1448 253 61 37 chr2 140876562 140876914 -112379669 - L2 LINE L2 -854 2460 2093 1472 57 0 6 chr2 140876914 140877091 -112379492 + AluSg/x SINE Alu 125 300 -12 1448 253 61 37 chr2 140877091 140877196 -112379387 - L2 LINE L2 -1221 2093 1992 539 313 35 83 chr2 140877810 140878174 -112378409 - L2 LINE L2 0 3272 2930 792 104 96 0 chr2 140878450 140878575 -112378008 + LTR47A LTR ERVL 316 452 0 4644 94 4 2 chr2 140878718 140879436 -112377147 + L1MA2 LINE L1 5213 5932 -372 383 352 70 0 chr2 140879865 140880007 -112376576 - MIR3 SINE MIR -24 184 33 250 306 56 37 chr2 140880323 140880431 -112376152 - L2 LINE L2 0 3272 3163 2207 97 0 3 chr2 140880675 140880965 -112375618 - AluSg SINE Alu -21 289 1 23 0 0 0 chr2 140880968 140880991 -112375592 + AT_rich Low_complexity Low_complexity 1 23 0 835 161 31 36 chr2 140881026 140881219 -112375364 - MER89 LTR ERV1 -367 192 1 222 213 32 11 chr2 140881223 140881317 -112375266 + (TATATG)n Simple_repeat Simple_repeat 6 101 0 204 274 0 0 chr2 140881993 140882055 -112374528 + CT-rich Low_complexity Low_complexity 2 63 0 469 276 169 15 chr2 140882071 140882332 -112374251 - MLT1K LTR MaLR -4 584 284 1598 116 51 11 chr2 140882433 140882708 -112373875 + L1MA4A LINE L1 6004 6289 -14 2289 102 7 0 chr2 140882986 140883291 -112373292 + AluSx SINE Alu 1 307 -5 1598 100 4 17 chr2 140883300 140883530 -112373053 + AluJo SINE Alu 86 312 0 1273 129 0 57 chr2 140883545 140883755 -112372828 + AluJb SINE Alu 114 311 -1 352 331 42 35 chr2 140883758 140883900 -112372683 - MIR SINE MIR -86 176 34 180 0 0 0 chr2 140885974 140885994 -112370589 + (A)n Simple_repeat Simple_repeat 1 20 0 306 0 0 0 chr2 140886158 140886192 -112370391 + (CA)n Simple_repeat Simple_repeat 2 35 0 255 278 0 0 chr2 140886297 140886369 -112370214 + MIR SINE MIR 166 237 -25 1918 119 3 48 chr2 140887135 140887446 -112369137 + AluJb SINE Alu 1 297 -15 1210 181 19 0 chr2 140887839 140888055 -112368528 + AluJo SINE Alu 1 220 -92 280 143 0 0 chr2 140888055 140888104 -112368479 + AluY SINE Alu 84 132 -169 2292 206 19 59 chr2 140888377 140889026 -112367557 - LTR5 LTR ERVK -346 623 1 4061 112 21 35 chr2 140889488 140890213 -112366370 + L1MA4A LINE L1 5472 6186 -117 470 211 167 26 chr2 140890756 140890912 -112365671 - MIR SINE MIR -62 200 23 1862 111 3 89 chr2 140891981 140892297 -112364286 - AluSx SINE Alu -23 289 1 2076 135 3 0 chr2 140892368 140892672 -112363911 - AluSg SINE Alu -5 305 1 2386 85 0 7 chr2 140893279 140893585 -112362998 + AluSq SINE Alu 1 304 -9 203 231 0 0 chr2 140894261 140894300 -112362283 + MER5A DNA MER1_type 124 162 -27 23 0 0 0 chr2 140894888 140894911 -112361672 + AT_rich Low_complexity Low_complexity 1 23 0 2207 78 0 36 chr2 140894911 140895217 -112361366 - AluSx SINE Alu -17 295 1 1508 163 6 82 chr2 140895393 140895521 -112361062 + AluJb SINE Alu 1 137 -175 244 0 27 27 chr2 140895521 140895558 -112361025 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 1508 163 6 82 chr2 140895558 140895748 -112360835 + AluJb SINE Alu 137 295 -17 465 319 71 12 chr2 140895984 140896153 -112360430 - MIR SINE MIR -66 196 18 2161 93 3 3 chr2 140896232 140896521 -112360062 - AluSx SINE Alu -19 293 5 22 35 0 0 chr2 140898533 140898562 -112358021 + AT_rich Low_complexity Low_complexity 1 29 0 1725 127 74 12 chr2 140902365 140902689 -112353894 + L1MA2 LINE L1 5961 6304 0 601 226 74 53 chr2 140902723 140902837 -112353746 + MLT1C LTR MaLR 228 349 -118 2102 119 159 8 chr2 140902837 140903207 -112353376 - MSTC LTR MaLR 0 428 3 601 226 74 53 chr2 140903207 140903282 -112353301 + MLT1C LTR MaLR 349 421 -46 587 284 75 54 chr2 140903462 140903797 -112352786 - L2 LINE L2 -705 2609 2268 1316 145 70 0 chr2 140904047 140904288 -112352295 - MLT1B LTR MaLR -132 258 1 237 237 118 0 chr2 140905227 140905320 -112351263 - L1MC/D LINE L1 -2015 5793 5690 3671 118 76 3 chr2 140905320 140905912 -112350671 - MER41B LTR ERV1 0 635 1 785 102 8 0 chr2 140905924 140906052 -112350531 - L1MC/D LINE L1 -2385 5400 5272 8886 145 24 10 chr2 140906083 140907179 -112349404 - L1MA1 LINE L1 -4 6298 5220 2080 89 7 7 chr2 140907179 140907471 -112349112 - AluY SINE Alu -19 292 1 8886 145 24 10 chr2 140907471 140909100 -112347483 - L1MA1 LINE L1 -1082 5220 3529 316 200 141 0 chr2 140909105 140909190 -112347393 - L1MC/D LINE L1 -891 5255 5159 1148 76 6 47 chr2 140909192 140909364 -112347219 - AluSq SINE Alu -15 298 134 2413 84 0 13 chr2 140909364 140909673 -112346910 - AluSx SINE Alu -7 305 1 2678 232 86 24 chr2 140909673 140910377 -112346206 - L1MC/D LINE L1 -979 5167 4507 2068 145 3 0 chr2 140910377 140910674 -112345909 - AluSx SINE Alu -14 298 1 2678 232 86 24 chr2 140910674 140910692 -112345891 - L1MC/D LINE L1 -1639 4507 4492 1204 153 44 13 chr2 140910692 140910921 -112345662 + MER46A DNA MER2_type 1 236 0 2678 232 86 24 chr2 140910921 140911307 -112345276 - L1MC/D LINE L1 -1654 4492 3933 886 172 294 14 chr2 140911337 140911558 -112345025 - AluJb SINE Alu -19 283 1 1731 141 24 0 chr2 140911769 140912060 -112344523 - AluJo SINE Alu -14 298 1 282 73 0 0 chr2 140912750 140912791 -112343792 + (TCCCC)n Simple_repeat Simple_repeat 5 45 0 2272 103 0 0 chr2 140915617 140915917 -112340666 - AluSx SINE Alu -12 300 1 2188 122 0 0 chr2 140917262 140917574 -112339009 + AluSx SINE Alu 1 312 0 313 250 13 0 chr2 140917782 140917858 -112338725 + MER3 DNA MER1_type 1 77 -132 235 245 105 47 chr2 140917994 140918101 -112338482 - MIR SINE MIR -102 106 19 297 244 96 30 chr2 140918578 140918713 -112337870 - L1ME3A LINE L1 -53 6117 5974 2176 104 0 7 chr2 140918713 140919012 -112337571 - AluSg SINE Alu -13 297 1 714 251 99 40 chr2 140919102 140919576 -112337007 - L1MC5 LINE L1 -430 7531 7030 * 1557 161 21 30 chr2 140919572 140920089 -112336494 - L1MB8 LINE L1 -11 6167 5603 1712 153 8 8 chr2 140920123 140920391 -112336192 - AluJb SINE Alu -6 306 39 229 272 111 0 chr2 140921868 140921949 -112334634 - MARNA DNA Mariner -362 224 135 1370 113 57 0 chr2 140922329 140922523 -112334060 - AluSx SINE Alu -107 205 1 2428 85 3 0 chr2 140922533 140922840 -112333743 - AluSp SINE Alu -5 308 1 21 0 0 0 chr2 140923351 140923372 -112333211 + AT_rich Low_complexity Low_complexity 1 21 0 834 117 33 0 chr2 140923585 140923705 -112332878 + FLAM_C SINE Alu 1 124 -19 23 54 0 0 chr2 140924338 140924375 -112332208 + AT_rich Low_complexity Low_complexity 1 37 0 313 237 0 0 chr2 140924509 140924568 -112332015 + MIR SINE MIR 91 149 -59 2200 215 75 20 chr2 140925138 140925802 -112330781 + L1MC4a LINE L1 7079 7779 -29 880 117 0 51 chr2 140925804 140925941 -112330642 - FLAM_C SINE Alu -1 132 3 22 0 0 0 chr2 140926163 140926185 -112330398 + AT_rich Low_complexity Low_complexity 1 22 0 1243 196 13 0 chr2 140926852 140927082 -112329501 - AluJb SINE Alu -16 296 64 1940 101 25 11 chr2 140927410 140927686 -112328897 + AluSg SINE Alu 1 280 -30 822 229 0 6 chr2 140928006 140928181 -112328402 + MER58A DNA MER1_type 9 182 -42 1431 150 142 0 chr2 140928224 140928484 -112328099 + AluSg SINE Alu 5 301 -9 2169 112 7 0 chr2 140928487 140928781 -112327802 + AluSx SINE Alu 1 296 -16 1520 155 16 12 chr2 140929205 140929450 -112327133 - AluJb SINE Alu -52 260 15 25 31 0 0 chr2 140929979 140930011 -112326572 + AT_rich Low_complexity Low_complexity 1 32 0 28 48 0 0 chr2 140930897 140930939 -112325644 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr2 140932603 140932624 -112323959 + AT_rich Low_complexity Low_complexity 1 21 0 1847 158 0 3 chr2 140934090 140934374 -112322209 - AluJb SINE Alu -20 292 10 28 95 0 0 chr2 140935760 140935844 -112320739 + AT_rich Low_complexity Low_complexity 1 84 0 1859 125 182 22 chr2 140935944 140936345 -112320238 - Tigger2 DNA MER2_type 0 2718 2254 * 4981 140 102 6 chr2 140936342 140937280 -112319303 - Tigger2 DNA MER2_type -1690 1028 1 249 245 168 35 chr2 140937411 140937554 -112319029 - MIR SINE MIR -94 168 7 227 313 125 0 chr2 140937558 140937638 -112318945 + MIR3 SINE MIR 65 154 -54 2006 123 3 3 chr2 140937736 140938055 -112318528 + AluSx SINE Alu 1 312 0 22 56 0 0 chr2 140938507 140938543 -112318040 + AT_rich Low_complexity Low_complexity 1 36 0 2349 82 7 0 chr2 140939577 140939868 -112316715 - AluSp SINE Alu -20 293 1 2247 113 3 3 chr2 140940720 140941030 -112315553 - AluSq SINE Alu -3 310 1 182 191 206 15 chr2 140942081 140942149 -112314434 - MIR3 SINE MIR -9 199 119 438 283 91 30 chr2 140943502 140943700 -112312883 + MIR SINE MIR 37 246 -16 2006 152 3 0 chr2 140945184 140945480 -112311103 - AluJo SINE Alu -13 299 3 2288 101 0 3 chr2 140946592 140946888 -112309695 + AluSx SINE Alu 1 295 -17 2345 115 12 135 chr2 140947028 140947258 -112309325 + Tigger2a DNA MER2_type 1 258 -2450 2229 101 7 3 chr2 140947258 140947566 -112309017 - AluSc SINE Alu 0 309 1 2345 115 12 135 chr2 140947566 140947706 -112308877 + Tigger2a DNA MER2_type 258 414 -2294 841 156 8 0 chr2 140947706 140947834 -112308749 + FLAM_C SINE Alu 2 130 -3 2188 47 0 0 chr2 140947841 140948130 -112308453 + AluY SINE Alu 30 318 0 2345 115 12 135 chr2 140948130 140948244 -112308339 + Tigger2a DNA MER2_type 420 434 0 310 259 142 59 chr2 140948592 140948888 -112307695 - LTR40b LTR ERVL -74 388 117 388 228 87 91 chr2 140949278 140949468 -112307115 - MER102b DNA MER1_type -1097 331 141 2201 89 0 36 chr2 140949468 140949771 -112306812 - AluSg SINE Alu -18 292 1 388 228 87 91 chr2 140949771 140949799 -112306784 - MER102b DNA MER1_type -1287 141 114 21 0 0 0 chr2 140949814 140949835 -112306748 + AT_rich Low_complexity Low_complexity 1 21 0 860 158 8 0 chr2 140949835 140949968 -112306615 - AluJo SINE Alu -178 134 1 388 285 7 51 chr2 140950211 140950348 -112306235 - L2 LINE L2 0 3272 3142 340 191 139 52 chr2 140950483 140950598 -112305985 + L1ME LINE L1 5484 5608 -513 1302 175 5 0 chr2 140950601 140950824 -112305759 + AluJo SINE Alu 81 304 -8 766 289 110 52 chr2 140950832 140951368 -112305215 + HAL1 LINE L1 1 567 -1940 447 261 74 94 chr2 140951375 140951727 -112304856 + HAL1 LINE L1 593 937 -1570 1578 245 81 49 chr2 140951753 140951822 -112304761 + HAL1 LINE L1 1672 1737 -770 1710 158 10 26 chr2 140951822 140952126 -112304457 + AluJo SINE Alu 1 299 -13 1578 245 81 49 chr2 140952126 140952726 -112303857 + HAL1 LINE L1 1737 2362 -145 1460 167 14 65 chr2 140952744 140953038 -112303545 - AluJo SINE Alu -20 292 14 204 40 0 0 chr2 140953060 140953085 -112303498 + (T)n Simple_repeat Simple_repeat 1 25 0 307 122 0 0 chr2 140953087 140953128 -112303455 - AluS SINE Alu -231 72 32 341 307 213 75 chr2 140953176 140953538 -112303045 - L2 LINE L2 -34 3238 2827 1718 142 31 0 chr2 140953545 140953668 -112302915 + AluJb SINE Alu 1 119 -193 207 0 0 0 chr2 140953668 140953691 -112302892 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1718 142 31 0 chr2 140953691 140953828 -112302755 + AluJb SINE Alu 119 269 -43 290 45 23 0 chr2 140953840 140953884 -112302699 + (CAAA)n Simple_repeat Simple_repeat 1 45 0 1078 233 32 45 chr2 140953903 140954001 -112302582 + LTR65 LTR ERV1 361 459 -210 1916 153 9 12 chr2 140954001 140954321 -112302262 + L1MB3 LINE L1 5865 6183 0 2347 86 0 0 chr2 140954331 140954623 -112301960 + AluSc SINE Alu 1 292 -17 1078 233 32 45 chr2 140954623 140954826 -112301757 + LTR65 LTR ERV1 468 669 0 652 230 171 18 chr2 140954971 140955245 -112301338 + L1MEd LINE L1 561 876 -5243 508 184 59 105 chr2 140955340 140955492 -112301091 + L2 LINE L2 3159 3303 -10 826 235 170 0 chr2 140956117 140956394 -112300189 - MER5C DNA MER1_type 0 324 1 968 203 37 5 chr2 140956404 140956591 -112299992 + MER58A DNA MER1_type 4 196 -28 233 269 104 0 chr2 140957096 140957163 -112299420 + MIR SINE MIR 132 205 -57 187 307 129 20 chr2 140957375 140957476 -112299107 - L2 LINE L2 -5 3308 3197 226 130 87 0 chr2 140957723 140957769 -112298814 + MIR SINE MIR 58 107 -155 397 232 32 11 chr2 140958221 140958316 -112298267 - MIR3 SINE MIR -24 184 88 279 0 0 0 chr2 140959206 140959237 -112297346 + (TTTTA)n Simple_repeat Simple_repeat 3 33 0 226 262 0 0 chr2 140959238 140959299 -112297284 - L1MA3 LINE L1 -2 6303 6243 1357 184 24 68 chr2 140959695 140960075 -112296508 + MLT1A2 LTR MaLR 10 372 -2 310 239 23 23 chr2 140960105 140960193 -112296390 + LTR67 LTR ERVL 462 549 -8 2337 75 3 0 chr2 140960333 140960644 -112295939 - AluSx SINE Alu 0 312 1 1437 70 5 40 chr2 140961935 140962135 -112294448 - L1PA13 LINE L1 -4 6159 5967 2072 142 7 0 chr2 140963318 140963628 -112292955 + AluJb SINE Alu 1 312 0 184 73 0 49 chr2 140963641 140963682 -112292901 + (GAAAA)n Simple_repeat Simple_repeat 2 40 0 1890 136 50 4 chr2 140963686 140963965 -112292618 + AluJb SINE Alu 1 292 -20 1628 81 35 147 chr2 140964078 140964424 -112292159 - L1MA2 LINE L1 0 6304 5998 318 236 25 96 chr2 140964635 140964792 -112291791 - L1ME4a LINE L1 -46 6075 5930 2347 92 0 0 chr2 140964914 140965209 -112291374 - AluSg SINE Alu -15 295 1 401 260 106 24 chr2 140965267 140965475 -112291108 - L1ME4a LINE L1 -378 5743 5519 26 0 0 0 chr2 140965511 140965537 -112291046 + AT_rich Low_complexity Low_complexity 1 26 0 965 173 0 0 chr2 140965581 140965731 -112290852 - AluJo/FRAM SINE Alu -26 286 137 1952 138 0 41 chr2 140965734 140966053 -112290530 - AluSx SINE Alu -6 306 1 834 177 134 56 chr2 140966482 140966545 -112290038 - MIR SINE MIR 0 262 205 914 93 78 0 chr2 140966545 140966674 -112289909 + MER85 DNA T2_type 1 139 0 834 177 134 56 chr2 140966674 140966842 -112289741 - MIR SINE MIR -57 205 13 1575 201 3 19 chr2 140967411 140967719 -112288864 - AluJo SINE Alu -9 303 1 2586 44 0 0 chr2 140968045 140968343 -112288240 + AluY SINE Alu 2 299 -12 509 203 0 0 chr2 140968374 140968453 -112288130 + AluJ/FLAM SINE Alu 4 82 -230 917 192 0 0 chr2 140968455 140968636 -112287947 - AluJo/FRAM SINE Alu 0 316 136 488 69 0 0 chr2 140968636 140968694 -112287889 + FLAM SINE Alu 67 124 -19 923 189 28 6 chr2 140968925 140969105 -112287478 - MER20 DNA MER1_type -5 214 31 1029 213 185 23 chr2 140969325 140969714 -112286869 - HAL1 LINE L1 -1 2506 2055 282 29 0 0 chr2 140969733 140969768 -112286815 + (TTTG)n Simple_repeat Simple_repeat 1 35 0 1864 120 113 40 chr2 140969768 140969826 -112286757 - L1MC1 LINE L1 -6 6327 6275 2120 135 26 0 chr2 140969826 140970129 -112286454 + AluSx SINE Alu 1 311 -1 1864 120 113 40 chr2 140970129 140970396 -112286187 - L1MC1 LINE L1 -58 6275 5978 945 275 58 3 chr2 140970569 140970860 -112285723 - HAL1 LINE L1 -636 1871 1565 1852 151 3 26 chr2 140970863 140971175 -112285408 + AluJb SINE Alu 4 308 -4 603 143 0 57 chr2 140971178 140971283 -112285300 - FLAM_A SINE Alu -43 99 1 3091 242 58 27 chr2 140971352 140972401 -112284182 - L1ME3A LINE L1 -6 6164 5086 2250 106 0 0 chr2 140972401 140972694 -112283889 + AluSc SINE Alu 1 293 -16 3091 242 58 27 chr2 140972694 140972748 -112283835 - L1ME3A LINE L1 -1084 5086 5035 1217 203 0 25 chr2 140972757 140972994 -112283589 + AluJo SINE Alu 1 231 -81 486 197 61 41 chr2 140972999 140973146 -112283437 - L1ME3A LINE L1 -1145 5001 4852 1299 237 22 11 chr2 140973153 140973508 -112283075 - L1ME3A LINE L1 -1350 4796 4438 433 253 59 95 chr2 140973525 140973830 -112282753 - HAL1 LINE L1 -964 1543 1250 * 1430 307 44 41 chr2 140973803 140974591 -112281992 - HAL1 LINE L1 -1555 952 162 647 229 89 0 chr2 140974632 140974789 -112281794 - MER104 DNA Tc2 0 180 10 2088 97 34 10 chr2 140974798 140975096 -112281487 + AluSp SINE Alu 1 305 -8 1410 208 14 21 chr2 140975137 140975426 -112281157 - AluJo SINE Alu -23 289 3 1058 227 110 54 chr2 140975462 140975592 -112280991 + L1M4 LINE L1 4856 4977 -1169 2083 122 20 3 chr2 140975592 140975888 -112280695 + AluSx SINE Alu 2 302 -10 1058 227 110 54 chr2 140975888 140976202 -112280381 + L1M4 LINE L1 4977 5325 -821 1028 170 0 2 chr2 140976206 140976455 -112280128 + AluJb SINE Alu 11 297 -15 2305 99 0 3 chr2 140976801 140977103 -112279480 - AluSq SINE Alu -9 304 4 1511 169 25 25 chr2 140977107 140977385 -112279198 - AluJo SINE Alu -18 294 17 2061 127 63 36 chr2 140977385 140977747 -112278836 + THE1C LTR MaLR 4 375 0 1669 169 62 18 chr2 140977911 140978249 -112278334 + MLT1A1 LTR MaLR 10 362 -3 336 102 0 0 chr2 140978249 140978298 -112278285 + (CA)n Simple_repeat Simple_repeat 2 50 0 260 322 88 83 chr2 140980312 140980926 -112275657 + L2 LINE L2 2400 3048 -224 27 0 0 0 chr2 140981854 140981881 -112274702 + AT_rich Low_complexity Low_complexity 1 27 0 2691 39 0 3 chr2 140982161 140982473 -112274110 - AluY SINE Alu 0 311 1 189 263 0 0 chr2 140982905 140982943 -112273640 + MIR SINE MIR 69 106 -102 22 0 0 0 chr2 140982975 140982997 -112273586 + AT_rich Low_complexity Low_complexity 1 22 0 242 192 82 27 chr2 140983087 140983160 -112273423 + MER5A DNA MER1_type 68 144 -45 1630 193 3 0 chr2 140983771 140984200 -112272383 + AluJo SINE Alu 21 450 0 689 93 10 0 chr2 140984786 140984883 -112271700 - MER53 DNA DNA -91 98 1 366 328 55 0 chr2 140984894 140985022 -112271561 + MIR SINE MIR 118 252 -10 21 0 0 0 chr2 140985031 140985052 -112271531 + AT_rich Low_complexity Low_complexity 1 21 0 2140 125 0 16 chr2 140985061 140985373 -112271210 + AluJb SINE Alu 1 307 -5 223 309 72 10 chr2 140985565 140985662 -112270921 + MIR SINE MIR 95 197 -65 2250 54 0 14 chr2 140985878 140986156 -112270427 + AluY SINE Alu 1 274 -37 219 88 0 0 chr2 140986158 140986192 -112270391 + (CAAA)n Simple_repeat Simple_repeat 1 34 0 1080 175 12 0 chr2 140987566 140987737 -112268846 + FAM SINE Alu 3 175 0 760 345 39 61 chr2 140987838 140988648 -112267935 - L2 LINE L2 -31 3241 2449 193 302 48 0 chr2 140988677 140988740 -112267843 + L2 LINE L2 2564 2629 -685 1403 165 58 61 chr2 140988766 140988901 -112267682 + L1MB8 LINE L1 5454 5588 -590 2024 117 0 0 chr2 140988901 140989174 -112267409 + AluSg SINE Alu 38 310 0 1403 165 58 61 chr2 140989174 140989365 -112267218 + L1MB8 LINE L1 5588 5779 -399 195 69 0 0 chr2 140989378 140989407 -112267176 + (TTTAA)n Simple_repeat Simple_repeat 2 30 0 9217 28 8 228 chr2 140989407 140991171 -112265412 - SVA Other Other -7 1379 4 1572 162 20 121 chr2 140991263 140991440 -112265143 + L1MB8 LINE L1 5773 5966 -212 2157 113 0 7 chr2 140991440 140991759 -112264824 + AluJb SINE Alu 1 312 0 1572 162 20 121 chr2 140991759 140992026 -112264557 + L1MB8 LINE L1 5966 6172 -6 279 315 66 66 chr2 140992045 140992161 -112264422 + L2 LINE L2 2793 2911 -403 2301 80 3 7 chr2 140992161 140992461 -112264122 - AluSp SINE Alu -14 299 1 279 315 66 66 chr2 140992461 140992525 -112264058 + L2 LINE L2 2910 2973 -341 212 288 16 72 chr2 140992592 140992717 -112263866 + L2 LINE L2 3109 3226 -87 301 287 23 39 chr2 140992857 140992963 -112263620 - L2 LINE L2 -925 2389 2284 396 0 0 0 chr2 140992963 140993007 -112263576 + (TG)n Simple_repeat Simple_repeat 1 44 0 301 287 23 39 chr2 140993007 140993029 -112263554 - L2 LINE L2 -1030 2284 2263 349 272 231 17 chr2 140993044 140993322 -112263261 - L2 LINE L2 -1183 2131 1787 2165 113 0 3 chr2 140993322 140993615 -112262968 - AluSx SINE Alu -12 300 9 349 272 231 17 chr2 140993615 140993626 -112262957 - L2 LINE L2 -1527 1787 1780 1347 206 8 0 chr2 140993641 140993893 -112262690 + HERVL40 LTR ERVL 5277 5530 0 1922 228 24 24 chr2 140993893 140994353 -112262230 + LTR40b LTR ERVL 1 460 -2 182 219 34 101 chr2 140994369 140994488 -112262095 - L2 LINE L2 -1548 1766 1656 330 266 13 0 chr2 140994490 140994569 -112262014 + L1ME3A LINE L1 5703 5782 -388 312 289 0 21 chr2 140994587 140994684 -112261899 + L1MC4 LINE L1 6620 6714 -1328 491 145 0 0 chr2 140994687 140994763 -112261820 - AluJ/FLAM SINE Alu -236 76 2 346 236 8 73 chr2 140994777 140994900 -112261683 - L1ME3A LINE L1 -281 5889 5775 2019 132 0 14 chr2 140994901 140995196 -112261387 + AluSx SINE Alu 4 294 -18 256 308 17 25 chr2 140995308 140995428 -112261155 + L1ME3A LINE L1 5963 6081 -89 210 71 0 0 chr2 140995441 140995469 -112261114 + (T)n Simple_repeat Simple_repeat 1 28 0 1672 173 13 7 chr2 140995627 140995934 -112260649 + AluJb SINE Alu 1 309 -3 384 272 26 18 chr2 140996181 140996295 -112260288 - L2 LINE L2 -5 3308 3194 219 319 124 26 chr2 140996397 140996510 -112260073 + L2 LINE L2 3147 3270 -2 449 276 77 24 chr2 140997150 140997320 -112259263 + MIR SINE MIR 6 184 -78 230 340 19 28 chr2 140997413 140997519 -112259064 + L2 LINE L2 3121 3225 -47 2040 97 45 10 chr2 140997665 140997955 -112258628 - AluSx SINE Alu -12 300 1 2581 47 0 0 chr2 140998558 140998858 -112257725 + AluY SINE Alu 12 311 0 2035 115 10 7 chr2 140999126 140999430 -112257153 + AluSx SINE Alu 1 305 -7 1773 156 56 11 chr2 140999774 141000134 -112256449 - L1MC1 LINE L1 -5 6328 5953 613 243 9 17 chr2 141000419 141000582 -112256001 - MIR SINE MIR 0 262 102 2190 125 3 0 chr2 141000633 141000938 -112255645 + AluSq SINE Alu 1 306 -7 386 259 120 0 chr2 141001317 141001538 -112255045 - L1MC1 LINE L1 -714 5583 5517 1203 187 0 36 chr2 141002258 141002483 -112254100 - AluJo SINE Alu -21 291 75 267 31 0 0 chr2 141002591 141002623 -112253960 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2033 108 7 0 chr2 141002623 141002900 -112253683 - AluSx SINE Alu -33 279 1 435 267 156 53 chr2 141004437 141004662 -112251921 - MIR SINE MIR 0 262 15 219 69 0 0 chr2 141004670 141004699 -112251884 + (CA)n Simple_repeat Simple_repeat 1 29 0 * 261 0 0 0 chr2 141004698 141004727 -112251856 + (TC)n Simple_repeat Simple_repeat 1 29 0 1962 102 11 32 chr2 141005034 141005170 -112251413 + AluSx SINE Alu 1 138 -174 2383 68 0 3 chr2 141005170 141005463 -112251120 + AluY SINE Alu 1 292 -19 1962 102 11 32 chr2 141005463 141005611 -112250972 + AluSx SINE Alu 138 279 -33 1881 169 3 0 chr2 141005641 141005937 -112250646 + AluJo SINE Alu 1 297 -15 1938 135 13 77 chr2 141006128 141006206 -112250377 - MLT1B LTR MaLR 0 390 309 2108 135 0 0 chr2 141006206 141006495 -112250088 + AluSx SINE Alu 1 289 -23 1938 135 13 77 chr2 141006495 141006808 -112249775 - MLT1B LTR MaLR -81 309 24 208 343 102 22 chr2 141006869 141007006 -112249577 - L2 LINE L2 -220 3052 2905 233 252 9 70 chr2 141007385 141007500 -112249083 + L1M4 LINE L1 5165 5272 -874 2133 87 0 0 chr2 141007532 141007798 -112248785 + AluSc SINE Alu 1 266 -43 2260 45 4 0 chr2 141007798 141008061 -112248522 + AluY SINE Alu 47 311 0 1067 239 42 11 chr2 141008163 141008447 -112248136 - LTR10B-int LTR ERV1 -6352 297 5 1294 261 57 29 chr2 141008447 141008938 -112247645 - LTR10B LTR ERV1 0 505 1 1663 169 27 38 chr2 141008938 141009306 -112247277 - HUERS-P1 LTR ERV1 -5625 638 275 260 0 57 0 chr2 141009433 141009468 -112247115 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 2033 147 0 3 chr2 141009471 141009763 -112246820 - AluSx SINE Alu -17 295 5 299 98 0 0 chr2 141010328 141010420 -112246163 + AluSc SINE Alu 242 333 0 1096 251 107 35 chr2 141011111 141011618 -112244965 - L1MEc LINE L1 -4603 1793 1251 6626 75 24 17 chr2 141011626 141012699 -112243884 - SVA Other Other -795 1386 400 389 272 10 0 chr2 141012822 141012925 -112243658 - U13 snRNA snRNA 0 104 1 2381 88 0 13 chr2 141012958 141013263 -112243320 - AluSc SINE Alu -8 301 1 283 118 20 0 chr2 141013265 141013316 -112243267 + Charlie1 DNA MER1_type 2709 2760 -1 319 266 161 0 chr2 141013360 141013503 -112243080 - L1MEc LINE L1 -5901 304 139 341 285 83 70 chr2 141013536 141013780 -112242803 - MIR SINE MIR -12 250 3 253 352 130 6 chr2 141013824 141013986 -112242597 + L3b LINE CR1 1400 1581 -2 259 266 106 20 chr2 141014757 141014956 -112241627 + L1MEc LINE L1 1861 2076 -4320 2044 95 61 7 chr2 141015126 141015420 -112241163 + AluSq SINE Alu 1 310 -3 3017 223 24 15 chr2 141015775 141016742 -112239841 - L1P4 LINE L1 -684 5484 4502 317 273 22 22 chr2 141016773 141016912 -112239671 - L1ME LINE L1 -339 5782 5644 2340 75 3 16 chr2 141016991 141017299 -112239284 - AluY SINE Alu -7 304 1 312 190 13 0 chr2 141017299 141017378 -112239205 - L1ME LINE L1 -806 5368 5289 1827 174 0 3 chr2 141017558 141017851 -112238732 - AluJo SINE Alu -19 293 2 28 29 0 0 chr2 141018701 141018736 -112237847 + AT_rich Low_complexity Low_complexity 1 35 0 180 0 0 0 chr2 141020233 141020253 -112236330 + (TC)n Simple_repeat Simple_repeat 1 20 0 * 306 0 0 0 chr2 141020252 141020286 -112236297 + (CA)n Simple_repeat Simple_repeat 1 34 0 730 277 103 7 chr2 141020859 141021159 -112235424 + MER57B LTR ERV1 66 394 -40 1810 117 11 46 chr2 141021160 141021441 -112235142 - AluSx SINE Alu -15 297 27 1351 203 12 40 chr2 141021914 141022239 -112234344 + MER82 DNA MER2_type 8 323 -330 33 25 0 0 chr2 141023722 141023762 -112232821 + AT_rich Low_complexity Low_complexity 1 40 0 1363 227 96 29 chr2 141023762 141024313 -112232270 + L1MC4 LINE L1 7455 8042 0 1581 136 96 4 chr2 141025951 141026223 -112230360 - AluJo SINE Alu -7 305 9 35 0 0 0 chr2 141026777 141026812 -112229771 + AT_rich Low_complexity Low_complexity 1 35 0 806 176 123 12 chr2 141027101 141027271 -112229312 - MER5A DNA MER1_type 0 189 1 325 317 59 40 chr2 141027960 141028162 -112228421 - L2 LINE L2 0 3313 3108 1969 160 0 3 chr2 141028361 141028661 -112227922 + AluJb SINE Alu 1 299 -13 237 225 0 88 chr2 141028735 141028798 -112227785 - L1ME4a LINE L1 -74 6047 5991 2564 46 0 3 chr2 141028798 141029102 -112227481 - AluY SINE Alu -8 303 1 237 225 0 88 chr2 141029102 141029118 -112227465 - L1ME4a LINE L1 -130 5991 5975 2144 119 3 10 chr2 141029159 141029469 -112227114 - AluSg SINE Alu -2 308 1 1203 172 160 0 chr2 141030363 141030625 -112225958 - AluSx SINE Alu -8 304 1 201 147 0 0 chr2 141031257 141031291 -112225292 + (TA)n Simple_repeat Simple_repeat 1 34 0 22 56 0 0 chr2 141031855 141031891 -112224692 + AT_rich Low_complexity Low_complexity 1 36 0 231 139 23 0 chr2 141031989 141032032 -112224551 + Alu SINE Alu 269 312 -8 282 272 168 8 chr2 141032326 141032451 -112224132 - L2 LINE L2 0 3313 3169 22 0 0 0 chr2 141032451 141032473 -112224110 + AT_rich Low_complexity Low_complexity 1 22 0 813 144 122 0 chr2 141032473 141032661 -112223922 - L1MA4 LINE L1 -3 6297 6087 230 286 233 16 chr2 141032805 141032994 -112223589 + L3b LINE CR1 1102 1331 -252 438 219 20 40 chr2 141033013 141033164 -112223419 - L1MC5 LINE L1 -44 7917 7770 2039 227 91 53 chr2 141033177 141033222 -112223361 - L1ME2 LINE L1 -14 6084 6042 2402 79 0 3 chr2 141033222 141033525 -112223058 - AluY SINE Alu -9 302 1 2039 227 91 53 chr2 141033525 141033657 -112222926 - L1ME2 LINE L1 -56 6042 5916 1599 192 7 0 chr2 141033657 141033969 -112222614 - AluSx SINE Alu 0 314 1 2039 227 91 53 chr2 141033969 141034636 -112221947 - L1ME2 LINE L1 -182 5916 5206 776 213 73 43 chr2 141034694 141034994 -112221589 - L1ME2 LINE L1 -1074 5006 4698 491 104 78 0 chr2 141034994 141035071 -112221512 - AluJ/FRAM SINE Alu -14 298 216 769 79 0 0 chr2 141035075 141035176 -112221407 - AluSq/x SINE Alu -209 104 4 1999 249 75 37 chr2 141035180 141035206 -112221377 - L1ME2 LINE L1 -1375 4705 4681 1103 188 69 0 chr2 141035206 141035408 -112221175 - MER20 DNA MER1_type -3 216 1 1999 249 75 37 chr2 141035408 141036275 -112220308 - L1ME2 LINE L1 -1399 4681 3778 3255 132 44 15 chr2 141036278 141036869 -112219714 - L1MB3 LINE L1 -2 6181 5574 636 290 98 34 chr2 141036870 141037697 -112218886 - L1ME2 LINE L1 -4567 1534 693 551 252 27 53 chr2 141037856 141038118 -112218465 - L1ME2 LINE L1 -5488 582 328 229 295 0 0 chr2 141038227 141038288 -112218295 + Charlie1 DNA MER1_type 1 61 -2700 463 183 10 39 chr2 141038298 141038402 -112218181 + Charlie1 DNA MER1_type 2344 2444 -317 290 310 0 50 chr2 141038931 141039031 -112217552 + MIR SINE MIR 2 96 -166 1672 161 10 47 chr2 141039094 141039392 -112217191 - AluJb SINE Alu -25 287 1 22 35 0 0 chr2 141039792 141039821 -112216762 + AT_rich Low_complexity Low_complexity 1 29 0 2189 106 0 0 chr2 141039823 141040129 -112216454 + AluSx SINE Alu 1 306 0 202 163 163 0 chr2 141040486 141040529 -112216054 + L2 LINE L2 3217 3266 -6 1111 208 87 39 chr2 141041241 141041655 -112214928 + LTR56 LTR ERV1 12 445 0 307 167 0 33 chr2 141041799 141041859 -112214724 - FLAM SINE Alu -8 125 68 27 0 0 0 chr2 141041867 141041894 -112214689 + AT_rich Low_complexity Low_complexity 1 27 0 1686 108 64 0 chr2 141041894 141042143 -112214440 - AluSg SINE Alu -45 265 1 272 275 0 0 chr2 141042222 141042291 -112214292 + Charlie4 DNA MER1_type 1884 1952 -9 22 70 0 0 chr2 141042304 141042347 -112214236 + AT_rich Low_complexity Low_complexity 1 43 0 25 0 0 0 chr2 141042686 141042711 -112213872 + AT_rich Low_complexity Low_complexity 1 25 0 1017 137 119 53 chr2 141042814 141043040 -112213543 - MER83C LTR ERV1 0 373 133 4629 117 7 26 chr2 141043068 141043256 -112213327 - MER83C-int LTR ERV1 0 4880 4690 225 0 0 0 chr2 141043256 141043281 -112213302 + (TTTC)n Simple_repeat Simple_repeat 2 26 0 1809 153 11 4 chr2 141043288 141043562 -112213021 - AluSx SINE Alu -36 276 1 4629 117 7 26 chr2 141043562 141044658 -112211925 - MER83C-int LTR ERV1 -196 4684 3547 6363 176 91 13 chr2 141044658 141046022 -112210561 - MER83C-int LTR ERV1 -3399 1481 12 1608 118 126 79 chr2 141046022 141046378 -112210205 - MER83C LTR ERV1 0 373 1 257 189 95 21 chr2 141046841 141046936 -112209647 - L1ME LINE L1 -337 5825 5724 329 218 56 78 chr2 141046974 141047116 -112209467 - HAL1 LINE L1 -1561 946 808 528 283 86 30 chr2 141047211 141047257 -112209326 - L1ME LINE L1 -474 5647 5605 2106 110 7 3 chr2 141047257 141047558 -112209025 - AluSc SINE Alu -7 302 1 528 283 86 30 chr2 141047558 141047845 -112208738 - L1ME LINE L1 -516 5605 5351 797 137 124 0 chr2 141048001 141048154 -112208429 - L1MB3 LINE L1 -3 6180 6009 1258 132 47 84 chr2 141048155 141048338 -112208245 - L1MB3 LINE L1 -252 5931 5761 2139 110 0 0 chr2 141048338 141048649 -112207934 + AluSx SINE Alu 1 311 0 1258 132 47 84 chr2 141048649 141048760 -112207823 - L1MB3 LINE L1 -422 5761 5647 931 120 0 0 chr2 141048760 141048885 -112207698 + FLAM_C SINE Alu 1 125 -18 1792 164 67 25 chr2 141048901 141049572 -112207011 - L1MB3 LINE L1 -512 5668 4967 319 264 185 43 chr2 141049671 141049925 -112206658 - L1ME LINE L1 -1088 5058 4769 531 31 0 0 chr2 141049996 141050061 -112206522 + (TCCCC)n Simple_repeat Simple_repeat 1 65 0 1361 164 96 39 chr2 141050061 141050223 -112206360 - AluJb SINE Alu -6 296 110 2180 98 0 14 chr2 141050223 141050519 -112206064 - AluSc SINE Alu -17 292 1 1361 164 96 39 chr2 141050519 141050636 -112205947 - AluJb SINE Alu -192 110 1 274 276 71 31 chr2 141051123 141051198 -112205385 + MIR SINE MIR 66 147 -115 2363 38 45 0 chr2 141051198 141051488 -112205095 + AluY SINE Alu 1 303 -8 274 276 71 31 chr2 141051488 141051510 -112205073 + MIR SINE MIR 147 167 -95 1545 29 0 0 chr2 141052505 141052677 -112203906 + AluY SINE Alu 132 303 -8 230 273 23 0 chr2 141052682 141052770 -112203813 - L1MC4 LINE L1 -1339 6703 6614 2026 138 0 3 chr2 141053207 141053490 -112203093 + AluSx SINE Alu 1 282 -30 243 88 0 0 chr2 141053490 141053524 -112203059 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 3541 192 27 101 chr2 141053531 141053791 -112202792 - L1MB8 LINE L1 -15 6163 5885 2245 101 7 0 chr2 141053791 141054087 -112202496 - AluSx SINE Alu -14 298 1 3541 192 27 101 chr2 141054087 141054168 -112202415 - L1MB8 LINE L1 -293 5885 5800 1357 177 59 47 chr2 141054168 141054507 -112202076 + MER2 DNA MER2_type 2 344 0 3541 192 27 101 chr2 141054507 141055055 -112201528 - L1MB8 LINE L1 -378 5800 5215 2212 113 0 0 chr2 141055055 141055348 -112201235 + AluSq SINE Alu 3 295 -18 3541 192 27 101 chr2 141055348 141055629 -112200954 - L1MB8 LINE L1 -963 5215 4915 397 383 110 28 chr2 141055837 141056229 -112200354 - L2 LINE L2 -44 3228 2805 2281 231 157 20 chr2 141056878 141057752 -112198831 - L1ME2 LINE L1 -10 6154 5401 1934 143 40 3 chr2 141057752 141058053 -112198530 - AluJo SINE Alu 0 312 1 2281 231 157 20 chr2 141058053 141058946 -112197637 - L1ME2 LINE L1 -763 5401 4151 2293 113 3 0 chr2 141059497 141059807 -112196776 + AluSx SINE Alu 1 311 -1 5665 90 35 2 chr2 141059821 141060653 -112195930 - L1P LINE L1 -812 5334 4476 4050 74 0 4 chr2 141060653 141061178 -112195405 + L1PA7 LINE L1 5618 6143 -11 24 53 0 0 chr2 141061278 141061316 -112195267 + AT_rich Low_complexity Low_complexity 1 38 0 263 312 11 21 chr2 141062469 141062562 -112194021 - L2 LINE L2 0 3313 3222 374 314 162 15 chr2 141062753 141062957 -112193626 + MIR SINE MIR 29 262 0 2122 131 0 3 chr2 141063596 141063901 -112192682 - AluSq SINE Alu -9 304 1 2768 187 32 12 chr2 141064892 141065399 -112191184 - MER68 LTR ERV1 0 562 46 227 200 0 0 chr2 141065399 141065449 -112191134 + T-rich Low_complexity Low_complexity 1 50 0 312 71 0 0 chr2 141065503 141065553 -112191030 + L1MA3 LINE L1 6160 6209 -96 870 187 37 0 chr2 141065553 141065740 -112190843 - L1MA4 LINE L1 -144 6156 5963 798 136 51 51 chr2 141065885 141066061 -112190522 - L1MA4 LINE L1 -326 5974 5799 2353 86 0 0 chr2 141067171 141067472 -112189111 - AluY SINE Alu -10 301 1 347 119 34 0 chr2 141067472 141067531 -112189052 - MER68 LTR ERV1 -501 61 1 1406 186 57 0 chr2 141067734 141067981 -112188602 + Tigger7 DNA MER2_type 8 268 -2219 652 83 0 74 chr2 141067983 141068091 -112188492 + Tigger7 DNA MER2_type 2311 2410 -177 652 182 27 0 chr2 141068091 141068201 -112188382 + Tigger7 DNA MER2_type 2474 2586 -1 24 32 0 0 chr2 141068617 141068648 -112187935 + AT_rich Low_complexity Low_complexity 1 31 0 518 293 20 7 chr2 141068807 141068954 -112187629 + MIR SINE MIR 49 197 -65 21 0 0 0 chr2 141069132 141069153 -112187430 + AT_rich Low_complexity Low_complexity 1 21 0 2462 197 53 123 chr2 141069159 141069341 -112187242 - L1ME1 LINE L1 -29 6120 5927 1833 148 10 30 chr2 141069341 141069645 -112186938 - AluJo SINE Alu -14 298 1 2462 197 53 123 chr2 141069645 141070641 -112185942 - L1ME1 LINE L1 -222 5927 5033 2402 217 65 72 chr2 141070797 141071556 -112185027 - L1ME1 LINE L1 -1639 4490 3738 363 44 0 0 chr2 141071556 141071601 -112184982 + (TG)n Simple_repeat Simple_repeat 2 46 0 2402 217 65 72 chr2 141071601 141071846 -112184737 - L1ME1 LINE L1 -2391 3738 3493 251 329 0 12 chr2 141071843 141071925 -112184658 - L1ME1 LINE L1 -5751 368 288 * 277 304 42 36 chr2 141072533 141072701 -112183882 - L1ME1 LINE L1 -5939 180 12 297 325 17 26 chr2 141072981 141073098 -112183485 - L2 LINE L2 -181 3091 2976 1742 181 69 75 chr2 141074099 141074607 -112181976 + MLT1D LTR MaLR 1 505 0 2132 90 28 3 chr2 141074860 141075148 -112181435 + AluSg SINE Alu 3 297 -13 2097 120 7 3 chr2 141075160 141075461 -112181122 - AluSx SINE Alu -10 302 1 249 257 46 74 chr2 141076077 141076252 -112180331 + L1M4 LINE L1 717 886 -5656 1202 291 92 15 chr2 141076295 141076695 -112179888 + L1M4 LINE L1 870 1341 -5201 1608 165 11 18 chr2 141076695 141076824 -112179759 + AluSx SINE Alu 1 129 -181 306 0 0 0 chr2 141076824 141076858 -112179725 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 1608 165 11 18 chr2 141076858 141077040 -112179543 + AluSx SINE Alu 129 310 0 1202 291 92 15 chr2 141077040 141077287 -112179296 + L1M4 LINE L1 1341 1568 -4974 237 65 0 0 chr2 141077297 141077328 -112179255 + (TCTCCC)n Simple_repeat Simple_repeat 1 31 0 3687 58 6 2 chr2 141077329 141077798 -112178785 + SVA Other Other 2 472 -914 1173 85 0 0 chr2 141077899 141078161 -112178422 + (TTC)n Simple_repeat Simple_repeat 1 262 0 1543 177 35 3 chr2 141078163 141078628 -112177955 - AluJb SINE Alu 0 474 1 270 299 103 0 chr2 141078885 141079002 -112177581 - L3 LINE CR1 -282 1295 1167 369 131 0 0 chr2 141079540 141079601 -112176982 + (TTCC)n Simple_repeat Simple_repeat 3 63 0 2272 97 0 3 chr2 141079602 141079892 -112176691 - AluSx SINE Alu -23 289 1 309 244 43 43 chr2 141080089 141080204 -112176379 - L3 LINE CR1 -587 990 876 289 199 94 4 chr2 141080224 141080340 -112176243 + MER5A DNA MER1_type 4 176 -13 2253 113 0 0 chr2 141082293 141082594 -112173989 + AluSx SINE Alu 1 301 -11 2084 107 0 24 chr2 141083196 141083511 -112173072 - AluSx SINE Alu 0 308 1 236 313 48 36 chr2 141083557 141083640 -112172943 - MIR SINE MIR -159 103 20 28 48 0 0 chr2 141083691 141083733 -112172850 + AT_rich Low_complexity Low_complexity 1 42 0 1889 150 14 3 chr2 141084869 141085163 -112171420 + AluSx SINE Alu 1 297 -15 21 0 0 0 chr2 141085176 141085197 -112171386 + AT_rich Low_complexity Low_complexity 1 21 0 835 210 124 0 chr2 141085234 141085420 -112171163 + MER58C DNA MER1_type 7 215 0 2352 154 33 22 chr2 141085440 141085779 -112170804 - L1MB7 LINE L1 -20 6164 5815 1653 202 59 110 chr2 141085779 141086359 -112170224 - MER44D DNA MER2_type 0 605 1 2352 154 33 22 chr2 141086359 141086484 -112170099 - L1MB7 LINE L1 -369 5815 5693 2221 72 27 3 chr2 141087360 141087652 -112168931 - AluSc SINE Alu -4 305 7 2307 57 4 0 chr2 141087813 141088125 -112168458 - AluY SINE Alu 0 313 1 208 279 36 54 chr2 141088182 141088293 -112168290 + MIR SINE MIR 112 220 -42 603 242 90 66 chr2 141088717 141088961 -112167622 + MIR SINE MIR 1 250 -12 2029 142 0 3 chr2 141089352 141089640 -112166943 + AluJb SINE Alu 1 287 -25 2597 61 0 0 chr2 141089654 141089964 -112166619 + AluY SINE Alu 1 310 -1 303 217 43 61 chr2 141091404 141091519 -112165064 - L2 LINE L2 -164 3108 2996 2288 83 3 16 chr2 141091700 141092013 -112164570 - AluY SINE Alu -2 309 1 371 288 226 5 chr2 141092112 141092324 -112164259 + MIR SINE MIR 4 262 0 183 305 114 9 chr2 141092478 141092583 -112164000 + MIR SINE MIR 120 235 -27 564 234 26 36 chr2 141094575 141094767 -112161816 + L1ME LINE L1 5615 5804 -317 2225 114 0 3 chr2 141096527 141096824 -112159759 + AluSx SINE Alu 1 296 -16 1209 202 54 36 chr2 141097296 141097573 -112159010 + AluJo SINE Alu 1 282 -30 1845 189 0 3 chr2 141098298 141098610 -112157973 - AluJo SINE Alu -1 311 1 1889 128 3 31 chr2 141098656 141098946 -112157637 + AluJb SINE Alu 14 295 -17 1843 171 3 26 chr2 141099094 141099399 -112157184 - AluJo SINE Alu -14 298 1 287 278 35 0 chr2 141099412 141099543 -112157040 - L1MB7 LINE L1 -669 5497 5363 511 168 7 98 chr2 141099703 141099742 -112156841 - L1ME3 LINE L1 -7 6155 6114 2056 155 0 7 chr2 141099742 141100051 -112156532 + AluJb SINE Alu 1 307 -5 511 168 7 98 chr2 141100051 141100154 -112156429 - L1ME3 LINE L1 -48 6114 6026 663 172 70 65 chr2 141100154 141100340 -112156243 + MER3 DNA MER1_type 1 187 -22 1184 218 55 70 chr2 141100371 141100892 -112155691 - L1ME3 LINE L1 -197 5973 5489 2688 195 31 24 chr2 141100892 141101440 -112155143 - MER68 LTR ERV1 -10 552 1 4470 237 104 33 chr2 141101440 141101709 -112154874 - L1ME3 LINE L1 -674 5496 5248 2257 94 7 3 chr2 141101709 141102007 -112154576 - AluSg SINE Alu -11 299 1 4470 237 104 33 chr2 141102007 141103988 -112152595 - L1ME3 LINE L1 -922 5248 3073 2442 51 27 0 chr2 141104040 141104332 -112152251 - AluY SINE Alu -11 300 1 2280 190 125 11 chr2 141104618 141105169 -112151414 - LTR28 LTR ERV1 -425 595 1 1574 119 57 74 chr2 141105559 141105869 -112150714 - L1MA4A LINE L1 -9 6294 5989 321 26 0 0 chr2 141105869 141105907 -112150676 + (CA)n Simple_repeat Simple_repeat 2 39 0 1574 119 57 74 chr2 141105907 141105932 -112150651 - L1MA4A LINE L1 -314 5989 5965 573 319 112 4 chr2 141105987 141106219 -112150364 + MIR SINE MIR 6 262 0 2124 128 0 22 chr2 141106676 141106995 -112149588 - AluSx SINE Alu 0 312 1 201 342 65 1 chr2 141107068 141107184 -112149399 + MIR SINE MIR 34 155 -67 556 170 132 16 chr2 141107189 141107371 -112149212 - L1ME1 LINE L1 -223 5943 5741 241 222 25 25 chr2 141107372 141107453 -112149130 + L1MA10 LINE L1 6165 6245 -89 252 0 0 0 chr2 141107455 141107483 -112149100 + (CA)n Simple_repeat Simple_repeat 2 29 0 2116 138 0 0 chr2 141107547 141107845 -112148738 + AluSx SINE Alu 1 298 -14 1160 181 20 0 chr2 141108108 141108312 -112148271 - AluJo SINE Alu -20 292 85 1786 124 19 68 chr2 141108972 141109295 -112147288 - AluSx SINE Alu -5 307 1 255 207 52 0 chr2 141109375 141109433 -112147150 + MIR SINE MIR 82 142 -66 284 122 0 0 chr2 141109713 141109762 -112146821 - Alu SINE Alu -253 49 1 341 209 171 29 chr2 141110364 141110469 -112146114 - MIR SINE MIR -140 122 3 2321 81 0 14 chr2 141110615 141110910 -112145673 - AluY SINE Alu -20 291 1 245 316 197 32 chr2 141111789 141112007 -112144576 - L2 LINE L2 -5 3267 3014 629 239 47 26 chr2 141115062 141115296 -112141287 + L1ME LINE L1 5581 5819 -302 619 191 35 0 chr2 141116427 141116542 -112140041 - Tigger3(Golem) DNA MER2_type -13 3016 2898 1066 307 99 49 chr2 141116542 141117444 -112139139 + L1 LINE L1 2858 3804 -2342 618 271 104 19 chr2 141117507 141117920 -112138663 + L1 LINE L1 3897 4347 -1799 1198 202 0 23 chr2 141118048 141118266 -112138317 - AluJo SINE Alu -93 219 7 2367 263 89 26 chr2 141118272 141118505 -112138078 + L1MC4 LINE L1 6146 6363 -1525 2350 99 10 3 chr2 141118505 141118809 -112137774 + AluSx SINE Alu 1 306 -6 2367 263 89 26 chr2 141118809 141119894 -112136689 + L1MC4 LINE L1 6363 7535 -353 2483 147 128 94 chr2 141119934 141120148 -112136435 + L1MC3 LINE L1 6873 7078 -707 229 222 32 0 chr2 141120148 141120211 -112136372 + MLT1F1 LTR MaLR 35 99 -468 2483 147 128 94 chr2 141120211 141120628 -112135955 + L1MC3 LINE L1 7078 7590 -195 2357 165 10 27 chr2 141120635 141121121 -112135462 + L1MB7 LINE L1 5688 6165 -19 244 71 0 24 chr2 141121124 141121166 -112135417 + L1MC3 LINE L1 7574 7614 -171 459 231 73 87 chr2 141121192 141121343 -112135240 + L1MC4 LINE L1 7549 7701 -341 2269 113 0 10 chr2 141121343 141121654 -112134929 + AluSx SINE Alu 1 308 -4 459 231 73 87 chr2 141121654 141121870 -112134713 + L1MC4 LINE L1 7701 7911 -131 308 240 8 66 chr2 141122132 141122253 -112134330 + L1ME LINE L1 5630 5743 -427 22 35 0 0 chr2 141123299 141123328 -112133255 + AT_rich Low_complexity Low_complexity 1 29 0 2161 99 46 0 chr2 141126850 141127133 -112129450 + AluSx SINE Alu 1 296 -16 1862 186 0 13 chr2 141127292 141127604 -112128979 - AluJo SINE Alu -4 308 1 21 57 0 0 chr2 141128140 141128175 -112128408 + AT_rich Low_complexity Low_complexity 1 35 0 24 67 0 0 chr2 141130915 141130960 -112125623 + AT_rich Low_complexity Low_complexity 1 45 0 212 375 23 0 chr2 141131408 141131496 -112125087 - L2 LINE L2 0 3272 3183 230 161 36 18 chr2 141131855 141131911 -112124672 + MLT1H LTR MaLR 102 158 -391 385 333 63 24 chr2 141131980 141132318 -112124265 - L2 LINE L2 -234 3038 2685 1310 262 164 19 chr2 141132585 141133097 -112123486 - L2 LINE L2 0 3313 2877 2284 90 3 17 chr2 141133097 141133398 -112123185 + AluSx SINE Alu 1 297 -15 1310 262 164 19 chr2 141133398 141133734 -112122849 - L2 LINE L2 -436 2877 2319 873 193 339 23 chr2 141133753 141134137 -112122446 + MLT1F LTR MaLR 37 541 -1 852 251 186 16 chr2 141134139 141134450 -112122133 - L2 LINE L2 -1018 2296 1933 350 293 171 24 chr2 141134736 141134941 -112121642 + MIR SINE MIR 28 262 0 273 98 0 0 chr2 141136104 141136145 -112120438 + (TGGA)n Simple_repeat Simple_repeat 2 42 0 281 239 32 45 chr2 141138668 141138823 -112117760 + L1M4 LINE L1 4549 4701 -1445 3358 124 5 29 chr2 141138870 141139057 -112117526 + L1MA6 LINE L1 5600 5790 -510 2280 115 0 3 chr2 141139057 141139369 -112117214 + AluSx SINE Alu 1 311 -1 234 0 0 0 chr2 141139369 141139395 -112117188 + (TA)n Simple_repeat Simple_repeat 2 27 0 3358 124 5 29 chr2 141139395 141139803 -112116780 + L1MA6 LINE L1 5788 6182 -118 3353 80 10 12 chr2 141139803 141140303 -112116280 - MER11A LTR ERVK 0 1266 768 2307 91 3 0 chr2 141140403 141140699 -112115884 - AluSq SINE Alu -16 297 1 2221 114 3 0 chr2 141141665 141141963 -112114620 + AluSg SINE Alu 1 299 -11 1229 201 52 10 chr2 141142023 141142331 -112114252 + Charlie1b DNA MER1_type 37 357 -166 871 175 0 0 chr2 141142371 141142514 -112114069 + FLAM_C SINE Alu 1 143 0 1968 134 13 3 chr2 141142515 141142820 -112113763 + AluSg SINE Alu 1 308 -2 6351 195 46 38 chr2 141143033 141143684 -112112899 - L1PBa LINE L1 -2282 4580 3935 324 0 0 0 chr2 141143684 141143720 -112112863 + (TG)n Simple_repeat Simple_repeat 2 37 0 6351 195 46 38 chr2 141143720 141144067 -112112516 - L1PBa LINE L1 -2927 3935 3592 2100 121 0 0 chr2 141144067 141144364 -112112219 - AluSg SINE Alu -13 297 1 6351 195 46 38 chr2 141144364 141144431 -112112152 - L1PBa LINE L1 -3270 3592 3527 1954 171 0 0 chr2 141144431 141144730 -112111853 + AluSx SINE Alu 1 299 -13 6351 195 46 38 chr2 141144730 141145585 -112110998 - L1PBa LINE L1 -3335 3527 2646 1017 83 57 0 chr2 141145589 141145746 -112110837 - L1PBa LINE L1 -4548 2315 2150 457 140 21 43 chr2 141145746 141145839 -112110744 - AluSx SINE Alu -45 267 177 1021 98 0 0 chr2 141145839 141145972 -112110611 - AluSx SINE Alu -180 133 1 2079 130 0 13 chr2 141145994 141146293 -112110290 - AluSx SINE Alu -17 295 1 464 79 13 0 chr2 141146299 141146375 -112110208 - L1PBa LINE L1 -4708 2155 2079 234 59 20 39 chr2 141146378 141146429 -112110154 + (TTTTA)n Simple_repeat Simple_repeat 1 50 0 11990 25 1 0 chr2 141146429 141148554 -112108029 - L1PA4 LINE L1 -24 6131 4005 452 262 101 61 chr2 141148659 141148762 -112107821 - L1MC5 LINE L1 -272 7689 7592 2218 108 3 3 chr2 141148762 141149058 -112107525 + AluSx SINE Alu 2 297 -15 452 262 101 61 chr2 141149058 141149378 -112107205 - L1MC5 LINE L1 -369 7592 7249 793 153 57 0 chr2 141149652 141149776 -112106807 + AluJo SINE Alu 1 131 -171 288 167 0 0 chr2 141149780 141149822 -112106761 + AluJo SINE Alu 129 170 -132 1218 145 0 40 chr2 141149822 141150022 -112106561 + AluJb SINE Alu 100 291 -21 547 92 72 0 chr2 141150496 141150649 -112105934 + (TA)n Simple_repeat Simple_repeat 1 164 0 648 184 0 96 chr2 141150649 141150785 -112105798 - FLAM_A SINE Alu -6 127 5 2346 80 20 0 chr2 141151663 141151963 -112104620 - AluY SINE Alu -5 306 1 359 260 16 0 chr2 141152709 141152836 -112103747 + GA-rich Low_complexity Low_complexity 3 131 0 460 204 69 104 chr2 141152837 141152922 -112103661 + L1MC5 LINE L1 7702 7788 -173 2150 117 0 0 chr2 141152922 141153257 -112103326 + AluSq SINE Alu 1 335 0 460 204 69 104 chr2 141153257 141153399 -112103184 + L1MC5 LINE L1 7788 7924 -37 269 311 42 52 chr2 141154603 141154796 -112101787 + MIR SINE MIR 22 212 -50 230 289 33 50 chr2 141155972 141156093 -112100490 - L1MC4a LINE L1 -1633 6175 6057 1833 144 22 0 chr2 141156353 141156668 -112099915 - AluSx SINE Alu 0 321 1 691 140 0 10 chr2 141156692 141156792 -112099791 + AluSx SINE Alu 2 100 -212 243 224 75 47 chr2 141156801 141156883 -112099700 - L1MC4a LINE L1 -2349 5459 5372 1519 132 0 0 chr2 141156883 141157096 -112099487 + AluSx SINE Alu 97 309 -3 243 224 75 47 chr2 141157096 141157120 -112099463 - L1MC4a LINE L1 -2436 5372 5350 1427 249 53 15 chr2 141157136 141157162 -112099421 - L1MC4a LINE L1 -154 5967 5943 823 156 24 36 chr2 141157162 141157299 -112099284 - L1MB7 LINE L1 -19 6165 6029 2179 131 0 0 chr2 141157299 141157605 -112098978 + AluSx SINE Alu 1 306 -6 823 156 24 36 chr2 141157605 141157634 -112098949 - L1MB7 LINE L1 -155 6029 6001 1427 249 53 15 chr2 141157634 141158075 -112098508 - L1MC4a LINE L1 -178 5943 5479 315 140 0 0 chr2 141158182 141158232 -112098351 + Charlie5 DNA MER1_type 151 200 -2412 * 831 179 134 9 chr2 141158230 141158454 -112098129 + Charlie5 DNA MER1_type 2352 2603 -9 4820 171 49 50 chr2 141158454 141159100 -112097483 + L1MB3 LINE L1 29 675 -5709 2273 101 0 25 chr2 141159100 141159418 -112097165 + AluSg SINE Alu 1 310 0 4820 171 49 50 chr2 141159418 141159789 -112096794 + L1MB3 LINE L1 675 1045 -5339 1921 122 13 43 chr2 141159795 141159940 -112096643 + AluSx SINE Alu 1 134 -178 2278 4 0 20 chr2 141159940 141160213 -112096370 + L1PA2 LINE L1 5909 6155 0 1921 122 13 43 chr2 141160213 141160371 -112096212 + AluSx SINE Alu 134 295 -17 4557 163 125 25 chr2 141160375 141161312 -112095271 + L1MB3 LINE L1 1049 2093 -4291 2242 120 3 0 chr2 141161312 141161621 -112094962 - AluSx SINE Alu 0 312 3 4557 163 125 25 chr2 141161621 141161681 -112094902 + L1MB3 LINE L1 2093 2146 -4238 * 7667 203 27 19 chr2 141161656 141161708 -112094875 + L1MB3 LINE L1 3805 3855 -2527 1719 103 5 0 chr2 141161708 141161932 -112094651 - AluSg/x SINE Alu -5 307 83 7667 203 27 19 chr2 141161932 141162905 -112093678 + L1MB3 LINE L1 3855 4852 -1530 2098 146 125 18 chr2 141162905 141163250 -112093333 + MSTB LTR MaLR 1 393 -33 2345 91 7 3 chr2 141163250 141163558 -112093025 - AluSp SINE Alu -4 309 1 2098 146 125 18 chr2 141163558 141163597 -112092986 + MSTB LTR MaLR 393 426 0 7667 203 27 19 chr2 141163597 141164300 -112092283 + L1MB3 LINE L1 4852 5548 -834 293 104 0 42 chr2 141164402 141164450 -112092133 - Alu SINE Alu -256 46 1 550 134 12 0 chr2 141164664 141164735 -112091848 + AluJ/FLAM SINE Alu 2 76 -236 1613 157 4 8 chr2 141164735 141164997 -112091586 + AluJb SINE Alu 42 302 -10 1697 172 10 10 chr2 141166755 141167051 -112089532 + AluJb SINE Alu 1 296 -16 1674 157 18 18 chr2 141168127 141168429 -112088154 + AluJo SINE Alu 1 302 0 923 232 57 19 chr2 141168882 141169093 -112087490 + MER20 DNA MER1_type 1 219 0 1786 154 17 3 chr2 141169324 141169622 -112086961 + AluJb SINE Alu 11 312 0 25 0 0 0 chr2 141169622 141169647 -112086936 + AT_rich Low_complexity Low_complexity 1 25 0 1592 206 0 0 chr2 141169649 141169935 -112086648 + AluJo SINE Alu 1 286 -26 247 261 23 23 chr2 141170102 141170190 -112086393 + (CATATA)n Simple_repeat Simple_repeat 3 90 0 31 26 0 0 chr2 141170450 141170488 -112086095 + AT_rich Low_complexity Low_complexity 1 38 0 222 344 11 0 chr2 141170518 141170608 -112085975 - L2 LINE L2 -595 2719 2629 2118 182 153 31 chr2 141170611 141171160 -112085423 - MLT1E3 LTR MaLR -8 616 1 372 279 40 60 chr2 141171322 141171523 -112085060 + HAL1 LINE L1 180 376 -2131 809 286 107 39 chr2 141171536 141171920 -112084663 + HAL1 LINE L1 449 858 -1649 235 264 42 14 chr2 141172714 141172786 -112083797 + L1MB3 LINE L1 5587 5660 -2384 3090 163 57 23 chr2 141172936 141173372 -112083211 + L1MB3 LINE L1 5767 6230 -189 2660 108 54 45 chr2 141173372 141173445 -112083138 - MSTA LTR MaLR 0 428 357 2117 84 70 0 chr2 141173445 141173731 -112082852 + AluSq SINE Alu 1 306 -7 2660 108 54 45 chr2 141173731 141174081 -112082502 - MSTA LTR MaLR -71 357 1 3090 163 57 23 chr2 141174081 141174246 -112082337 + L1MB3 LINE L1 6230 6388 -31 273 174 0 0 chr2 141174251 141174297 -112082286 + Charlie5 DNA MER1_type 2579 2624 0 2251 83 0 4 chr2 141175608 141175886 -112080697 - AluSq SINE Alu -9 304 28 2241 84 0 14 chr2 141175896 141176211 -112080372 - AluY SINE Alu 0 311 1 22 0 0 0 chr2 141176736 141176758 -112079825 + AT_rich Low_complexity Low_complexity 1 22 0 783 211 0 0 chr2 141177350 141177478 -112079105 - FLAM_A SINE Alu -5 128 1 2163 88 0 14 chr2 141178806 141179119 -112077464 - AluY SINE Alu 0 309 1 2005 112 4 0 chr2 141180273 141180541 -112076042 - AluSq SINE Alu -10 303 35 2176 96 0 40 chr2 141180898 141181201 -112075382 + AluSx SINE Alu 9 299 -13 546 277 45 58 chr2 141181388 141181767 -112074816 + L1ME4a LINE L1 5539 5912 -209 412 128 277 0 chr2 141182236 141182330 -112074253 - MER3 DNA MER1_type -52 157 38 2115 102 0 7 chr2 141182426 141182710 -112073873 - AluSx SINE Alu -30 282 1 647 292 90 63 chr2 141183231 141183259 -112073324 + L1ME3A LINE L1 5415 5441 -729 1929 134 7 3 chr2 141183259 141183550 -112073033 + AluSx SINE Alu 1 292 -20 647 292 90 63 chr2 141183550 141184042 -112072541 + L1ME3A LINE L1 5441 5949 -221 1829 162 3 16 chr2 141184050 141184358 -112072225 + AluJb SINE Alu 1 304 -8 1794 152 0 24 chr2 141184438 141184734 -112071849 + AluJo SINE Alu 12 300 -12 2440 60 0 44 chr2 141184738 141185054 -112071529 + AluY SINE Alu 3 304 -7 2318 113 3 0 chr2 141188231 141188541 -112068042 - AluSx SINE Alu -1 311 1 502 289 98 4 chr2 141188773 141189039 -112067544 - L1ME3A LINE L1 -225 5945 5655 886 161 40 0 chr2 141189043 141189192 -112067391 - MER5A DNA MER1_type -14 175 21 938 294 23 23 chr2 141189192 141189576 -112067007 - L1ME3A LINE L1 -501 5661 5278 477 283 48 75 chr2 141189671 141189707 -112066876 - L1ME3A LINE L1 -924 5222 5187 2428 71 0 0 chr2 141189707 141190001 -112066582 - AluY SINE Alu -17 294 1 477 283 48 75 chr2 141190001 141190403 -112066180 - L1ME3A LINE L1 -959 5187 4796 1457 130 123 56 chr2 141190422 141190566 -112066017 - AluJo SINE Alu -9 303 170 1752 158 72 0 chr2 141190566 141190857 -112065726 - AluJb SINE Alu 0 312 1 1457 130 123 56 chr2 141190857 141190996 -112065587 - AluJo SINE Alu -142 170 1 830 68 51 0 chr2 141191001 141191118 -112065465 - L1MA6 LINE L1 0 6300 6178 1906 21 46 0 chr2 141191119 141191399 -112065184 + MER11A LTR ERVK 1 387 -879 2209 114 0 7 chr2 141191611 141191908 -112064675 - AluSx SINE Alu -17 295 1 778 173 0 0 chr2 141191930 141192057 -112064526 + Charlie1 DNA MER1_type 2634 2760 -1 718 260 69 35 chr2 141192187 141192307 -112064276 - MIR SINE MIR -6 256 142 856 62 0 9 chr2 141192307 141192419 -112064164 - L1MA3 LINE L1 0 6305 6195 718 260 69 35 chr2 141192419 141192529 -112064054 - MIR SINE MIR -120 142 18 303 303 25 41 chr2 141192986 141193108 -112063475 + L3b LINE CR1 1282 1401 -182 580 200 289 5 chr2 141193379 141193569 -112063014 - MIR SINE MIR 0 262 19 2577 222 56 25 chr2 141193722 141194365 -112062218 + HsTC2c DNA Tc2 1 663 -66 26 64 0 0 chr2 141196297 141196344 -112060239 + AT_rich Low_complexity Low_complexity 1 47 0 498 247 51 34 chr2 141196400 141196578 -112060005 - L2 LINE L2 0 3313 3133 484 245 328 8 chr2 141196741 141196994 -112059589 - L2 LINE L2 -543 2771 2438 28 29 0 0 chr2 141197047 141197082 -112059501 + AT_rich Low_complexity Low_complexity 1 35 0 2782 10 0 0 chr2 141197648 141197948 -112058635 - AluY SINE Alu -11 300 1 186 103 0 0 chr2 141199358 141199387 -112057196 + (TA)n Simple_repeat Simple_repeat 2 30 0 510 212 116 27 chr2 141199412 141199558 -112057025 - MIR SINE MIR -8 254 96 1652 160 6 84 chr2 141199759 141200091 -112056492 + AluJb SINE Alu 1 306 -6 29956 115 67 6 chr2 141200092 141205254 -112051329 + L1PB1 LINE L1 1 5492 -659 2066 141 0 3 chr2 141205254 141205553 -112051030 + AluSx SINE Alu 1 298 -14 1369 89 5 10 chr2 141205553 141205756 -112050827 + L1PB1 LINE L1 5948 6149 -2 2345 103 3 0 chr2 141206689 141206999 -112049584 + AluSp SINE Alu 2 312 -1 2440 69 3 0 chr2 141207062 141207368 -112049215 + AluY SINE Alu 1 307 -4 1103 242 24 8 chr2 141207514 141207762 -112048821 - MIR SINE MIR 0 262 11 969 146 0 19 chr2 141207839 141207997 -112048586 - AluJb SINE Alu -22 290 136 2188 99 0 26 chr2 141208201 141208503 -112048080 - AluSc SINE Alu -15 294 1 1913 170 0 0 chr2 141208535 141208829 -112047754 - AluJb SINE Alu -18 294 1 1887 175 28 31 chr2 141209726 141210149 -112046434 + L1MB8 LINE L1 5751 6172 -6 228 268 56 0 chr2 141210385 141210456 -112046127 - MLT1L LTR MaLR -425 190 116 1784 177 98 41 chr2 141210600 141211041 -112045542 - MER31B LTR ERV1 0 466 1 2253 104 10 7 chr2 141211238 141211546 -112045037 - AluSp SINE Alu -4 309 1 2441 221 114 76 chr2 141212703 141213882 -112042701 - HAL1 LINE L1 -110 2397 1159 2389 94 7 0 chr2 141213882 141214189 -112042394 - AluSx SINE Alu -3 309 1 2441 221 114 76 chr2 141214189 141214372 -112042211 - HAL1 LINE L1 -1348 1159 984 1767 250 78 48 chr2 141214392 141215139 -112041444 - HAL1 LINE L1 -1627 880 112 21 0 0 0 chr2 141216333 141216354 -112040229 + AT_rich Low_complexity Low_complexity 1 21 0 5902 57 8 16 chr2 141216453 141217211 -112039372 + SVA Other Other 635 1386 0 26 0 0 0 chr2 141217211 141217237 -112039346 + AT_rich Low_complexity Low_complexity 1 26 0 2382 74 7 10 chr2 141217995 141218292 -112038291 + AluSp SINE Alu 1 296 -17 2272 77 10 10 chr2 141218618 141218929 -112037654 - AluY SINE Alu 0 311 1 2029 62 4 4 chr2 141219157 141219416 -112037167 + AluY SINE Alu 41 299 -12 344 264 57 19 chr2 141219635 141219741 -112036842 - L2 LINE L2 -5 3308 3199 576 253 113 18 chr2 141220512 141220911 -112035672 - MLT1J LTR MaLR -8 503 1 2175 107 0 36 chr2 141223364 141223672 -112032911 + AluSx SINE Alu 1 297 -15 1897 142 45 23 chr2 141223691 141224044 -112032539 - MLT1A1 LTR MaLR -4 361 1 2178 109 44 106 chr2 141224248 141224699 -112031884 + MSTC LTR MaLR 1 423 -5 2381 135 137 38 chr2 141224709 141225050 -112031533 - MER4D LTR ERV1 -10 756 409 2289 91 0 7 chr2 141225050 141225346 -112031237 - AluSg SINE Alu -16 294 1 2381 135 137 38 chr2 141225346 141225619 -112030964 - MER4D LTR ERV1 -357 409 164 2010 113 18 0 chr2 141225620 141225902 -112030681 - AluSx SINE Alu -24 288 2 560 122 0 0 chr2 141225902 141225992 -112030591 - MER4B LTR ERV1 -520 90 1 335 284 119 40 chr2 141226499 141226782 -112029801 + L1ME3A LINE L1 5024 5342 -804 2061 133 0 26 chr2 141226782 141227090 -112029493 + AluSx SINE Alu 1 300 -12 335 284 119 40 chr2 141227090 141227158 -112029425 + L1ME3A LINE L1 5342 5403 -743 1257 233 85 42 chr2 141227172 141227330 -112029253 - L1MC4 LINE L1 -708 7334 7184 2272 110 3 3 chr2 141227330 141227640 -112028943 - AluSg SINE Alu 0 310 1 1257 233 85 42 chr2 141227640 141227742 -112028841 - L1MC4 LINE L1 -858 7184 7088 2023 117 3 45 chr2 141227742 141228050 -112028533 + AluSx SINE Alu 1 295 -17 1257 233 85 42 chr2 141228050 141228385 -112028198 - L1MC4 LINE L1 -954 7088 6712 417 294 45 10 chr2 141228379 141228596 -112027987 + L1ME3A LINE L1 5649 5874 -296 * 27 29 0 0 chr2 141228947 141228981 -112027602 + AT_rich Low_complexity Low_complexity 1 34 0 1630 198 3 22 chr2 141229020 141229333 -112027250 - AluJo SINE Alu -5 307 1 23 78 0 0 chr2 141229417 141229468 -112027115 + AT_rich Low_complexity Low_complexity 1 51 0 2143 129 6 3 chr2 141229641 141229952 -112026631 - AluSx SINE Alu 0 312 1 24 0 0 0 chr2 141230020 141230044 -112026539 + AT_rich Low_complexity Low_complexity 1 24 0 185 77 19 58 chr2 141230830 141230882 -112025701 + (TA)n Simple_repeat Simple_repeat 1 50 0 352 112 24 59 chr2 141230910 141231079 -112025504 + (TA)n Simple_repeat Simple_repeat 2 164 0 285 171 0 47 chr2 141231134 141231263 -112025320 + (TA)n Simple_repeat Simple_repeat 2 124 0 2352 82 3 13 chr2 141232112 141232418 -112024165 + AluSp SINE Alu 1 303 -10 1456 159 90 31 chr2 141232509 141232798 -112023785 + AluJo SINE Alu 1 306 -6 24 0 0 0 chr2 141233081 141233105 -112023478 + AT_rich Low_complexity Low_complexity 1 24 0 1242 210 43 10 chr2 141233231 141233536 -112023047 - MER61A LTR ERV1 -28 315 1 255 226 16 0 chr2 141233608 141233670 -112022913 - MIR SINE MIR 0 262 200 807 169 0 0 chr2 141233705 141233823 -112022760 - FLAM_C SINE Alu -25 118 1 513 253 111 25 chr2 141233829 141233991 -112022592 - MIR SINE MIR -70 192 17 187 244 0 0 chr2 141234021 141234062 -112022521 + L2 LINE L2 3269 3309 -4 3291 153 56 39 chr2 141234168 141234521 -112022062 + L1MB7 LINE L1 5416 5761 -423 3683 145 11 20 chr2 141234521 141235162 -112021421 - MER41B LTR ERV1 0 635 1 3291 153 56 39 chr2 141235162 141235204 -112021379 + L1MB7 LINE L1 5761 5801 -383 2192 123 3 0 chr2 141235204 141235505 -112021078 + AluSx SINE Alu 3 304 -8 3291 153 56 39 chr2 141235505 141235683 -112020900 + L1MB7 LINE L1 5801 5974 -210 1568 155 97 72 chr2 141235683 141235701 -112020882 - LTR54B LTR ERV1 -2 496 480 1490 143 0 5 chr2 141235701 141235917 -112020666 + AluJb SINE Alu 87 301 -11 1568 155 97 72 chr2 141235917 141235951 -112020632 - LTR54B LTR ERV1 -18 480 448 1559 160 26 39 chr2 141235951 141236263 -112020320 - AluJo SINE Alu -4 308 1 1568 155 97 72 chr2 141236263 141236535 -112020048 - LTR54B LTR ERV1 -50 448 153 300 27 0 0 chr2 141236535 141236572 -112020011 + (TG)n Simple_repeat Simple_repeat 2 38 0 1568 155 97 72 chr2 141236572 141236729 -112019854 - LTR54B LTR ERV1 -345 153 1 3291 153 56 39 chr2 141236729 141236779 -112019804 + L1MB7 LINE L1 5974 6022 -162 2265 103 0 7 chr2 141236779 141237080 -112019503 + AluSg SINE Alu 1 299 -11 3291 153 56 39 chr2 141237080 141237203 -112019380 + L1MB7 LINE L1 6022 6178 -6 1126 148 0 0 chr2 141237204 141237366 -112019217 - AluSg/x SINE Alu -17 295 134 266 371 76 49 chr2 141237536 141237969 -112018614 - L2 LINE L2 -181 3091 2644 1387 156 10 117 chr2 141238002 141238386 -112018197 + MER7A DNA MER2_type 1 341 -5 200 235 12 99 chr2 141239122 141239203 -112017380 - L2 LINE L2 -916 2398 2325 6123 87 8 38 chr2 141239473 141239704 -112016879 - L1PA14 LINE L1 -3 6158 5921 2550 77 11 41 chr2 141239704 141239766 -112016817 - THE1A LTR MaLR 0 355 293 2339 104 3 0 chr2 141239766 141240074 -112016509 - AluSg SINE Alu 0 310 2 2550 77 11 41 chr2 141240074 141240377 -112016206 - THE1A LTR MaLR -62 293 1 11829 86 11 1 chr2 141240377 141241940 -112014643 - THE1A-int LTR MaLR 0 1580 1 2565 98 3 8 chr2 141241940 141242297 -112014286 - THE1A LTR MaLR 0 355 1 6123 87 8 38 chr2 141242297 141242902 -112013681 - L1PA14 LINE L1 -238 5923 5337 1747 189 0 0 chr2 141242902 141243204 -112013379 - AluSx SINE Alu 0 302 1 6123 87 8 38 chr2 141243204 141243516 -112013067 - L1PA14 LINE L1 -824 5337 5017 3301 157 12 21 chr2 141243516 141244229 -112012354 - L1PA12 LINE L1 -5876 1705 455 1069 190 15 5 chr2 141245589 141245789 -112010794 + AluSg/x SINE Alu 97 298 -12 2061 112 3 7 chr2 141246593 141246917 -112009666 - AluSx SINE Alu 0 323 1 718 174 7 29 chr2 141246917 141247055 -112009528 - AluSq/x SINE Alu -178 135 1 21 0 0 0 chr2 141247112 141247133 -112009450 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 141247244 141247266 -112009317 + AT_rich Low_complexity Low_complexity 1 22 0 1792 181 0 3 chr2 141247321 141247619 -112008964 + AluJo SINE Alu 1 297 -15 2074 96 38 10 chr2 141247715 141248007 -112008576 - AluSg SINE Alu -10 300 1 765 234 179 60 chr2 141248052 141248654 -112007929 + HAL1 LINE L1 656 1344 -1163 649 152 38 30 chr2 141248654 141248786 -112007797 + FLAM_A SINE Alu 1 133 0 765 234 179 60 chr2 141248786 141248844 -112007739 + HAL1 LINE L1 1344 1394 -1113 1929 144 7 0 chr2 141249051 141249343 -112007240 - AluSx SINE Alu -18 294 1 669 259 128 48 chr2 141249690 141250361 -112006222 + HAL1 LINE L1 837 1580 -927 1900 170 0 3 chr2 141250361 141250649 -112005934 + AluJb SINE Alu 1 287 -25 669 259 128 48 chr2 141250649 141250750 -112005833 + HAL1 LINE L1 1580 1671 -836 1442 156 122 11 chr2 141250917 141251180 -112005403 - AluJo SINE Alu -10 292 1 2088 128 14 0 chr2 141251245 141251534 -112005049 - AluSg SINE Alu -17 293 1 816 161 126 22 chr2 141251825 141252048 -112004535 - L1MB4 LINE L1 0 6180 5935 1682 236 53 92 chr2 141252143 141252576 -112004007 - MLT1G1 LTR MaLR 0 595 192 1771 122 111 4 chr2 141252576 141252847 -112003736 + AluSq SINE Alu 1 300 -13 1682 236 53 92 chr2 141252847 141253032 -112003551 - MLT1G1 LTR MaLR -403 192 1 1763 46 81 3 chr2 141253292 141253575 -112003008 - L1PA4 LINE L1 -1 6154 5850 35386 47 6 1 chr2 141253678 141258294 -111998289 - L1PA4 LINE L1 -1494 4652 15 9197 112 59 16 chr2 141258297 141258529 -111998054 - L1PBa LINE L1 -4773 2090 1869 1934 150 7 0 chr2 141258529 141258822 -111997761 + AluSx SINE Alu 1 295 -17 9197 112 59 16 chr2 141258822 141260174 -111996409 - L1PBa LINE L1 -4994 1869 439 252 324 59 71 chr2 141260480 141260650 -111995933 + L3b LINE CR1 1386 1553 -30 468 335 83 28 chr2 141261146 141261471 -111995112 + L2 LINE L2 2386 2728 -586 1182 168 15 25 chr2 141261619 141261763 -111994820 - AluJo SINE Alu -39 273 130 2255 125 0 0 chr2 141261763 141262067 -111994516 - AluSq SINE Alu -9 304 1 1182 168 15 25 chr2 141262067 141262125 -111994458 - AluJo SINE Alu -182 130 73 489 347 74 57 chr2 141262125 141262531 -111994052 + L2 LINE L2 2856 3268 -4 2344 90 0 3 chr2 141263106 141263405 -111993178 - AluSg SINE Alu -12 298 1 325 214 102 61 chr2 141263501 141263697 -111992886 + HAL1 LINE L1 2007 2210 -297 2389 265 94 17 chr2 141263710 141265514 -111991069 - L1M4 LINE L1 -913 5935 3955 1950 116 63 3 chr2 141265556 141265841 -111990742 - AluSx SINE Alu -10 302 1 4337 153 31 13 chr2 141265852 141266855 -111989728 - L1MCc LINE L1 -3778 3163 2146 2509 62 0 16 chr2 141266866 141267173 -111989410 - AluY SINE Alu -9 302 1 2141 134 0 3 chr2 141267173 141267471 -111989112 - AluSx SINE Alu -15 297 1 925 123 0 8 chr2 141267472 141267602 -111988981 - AluSq/x SINE Alu -179 134 6 200 35 35 0 chr2 141267624 141267653 -111988930 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 1671 197 3 14 chr2 141267657 141267947 -111988636 - AluJo SINE Alu -25 287 1 2179 258 58 33 chr2 141267990 141268899 -111987684 - L1MCc LINE L1 -4889 1534 649 258 206 16 16 chr2 141269055 141269118 -111987465 - L1MCc LINE L1 -6015 408 346 700 185 0 44 chr2 141269209 141269344 -111987239 - FLAM_C SINE Alu -1 132 4 343 258 0 0 chr2 141269395 141269488 -111987095 - L1MCc LINE L1 -6141 282 190 * 2220 226 88 37 chr2 141269486 141269563 -111987020 + L1ME1 LINE L1 3956 4028 -2118 2452 67 0 3 chr2 141269563 141269862 -111986721 - AluY SINE Alu -13 298 1 2220 226 88 37 chr2 141269862 141270517 -111986066 + L1ME1 LINE L1 4028 4749 -1397 2356 103 0 0 chr2 141270517 141270818 -111985765 - AluSx SINE Alu -11 301 1 2220 226 88 37 chr2 141270818 141271026 -111985557 + L1ME1 LINE L1 4749 4945 -1201 510 220 92 36 chr2 141271131 141271451 -111985132 - Tigger3(Golem) DNA MER2_type -1 3028 1 1582 248 63 8 chr2 141271453 141272158 -111984425 + L1ME1 LINE L1 5018 5760 -406 935 194 0 28 chr2 141272161 141272341 -111984242 + AluJo SINE Alu 118 292 -20 1302 217 23 0 chr2 141272384 141272693 -111983890 + L1ME1 LINE L1 5805 6120 -46 804 197 21 0 chr2 141272693 141272940 -111983643 - FRAM SINE Alu 0 251 2 257 151 19 0 chr2 141272943 141272996 -111983587 + L1ME1 LINE L1 6107 6160 -6 2080 134 3 16 chr2 141273318 141273631 -111982952 + AluSx SINE Alu 4 312 0 1105 134 0 6 chr2 141273788 141273952 -111982631 + AluSg/x SINE Alu 135 297 -13 2360 80 3 3 chr2 141274447 141274746 -111981837 - AluSp SINE Alu -14 299 1 21 0 0 0 chr2 141274875 141274896 -111981687 + AT_rich Low_complexity Low_complexity 1 21 0 2198 76 6 60 chr2 141275331 141275647 -111980936 - AluSx SINE Alu -13 299 1 239 220 40 148 chr2 141276572 141276795 -111979788 + HAL1 LINE L1 9 207 -2300 22 0 0 0 chr2 141277207 141277229 -111979354 + AT_rich Low_complexity Low_complexity 1 22 0 2381 90 0 0 chr2 141277267 141277566 -111979017 + AluSc SINE Alu 1 299 -10 352 303 22 0 chr2 141278617 141278706 -111977877 - MIR SINE MIR -151 111 21 31 0 0 0 chr2 141278726 141278757 -111977826 + AT_rich Low_complexity Low_complexity 1 31 0 423 0 0 0 chr2 141278794 141278841 -111977742 + (TG)n Simple_repeat Simple_repeat 2 48 0 251 269 40 34 chr2 141278972 141279121 -111977462 + L1MC/D LINE L1 5762 5911 -1897 187 91 23 45 chr2 141279127 141279171 -111977412 + (TATG)n Simple_repeat Simple_repeat 2 44 0 298 214 0 14 chr2 141279686 141279756 -111976827 - REP3 LTR ERV -41 521 453 * 936 213 102 26 chr2 141279751 141280174 -111976409 - MER69 DNA AcHobo -71 2455 2001 872 262 78 32 chr2 141280162 141280610 -111975973 - MER69 DNA AcHobo -657 569 54 * 1001 171 0 34 chr2 141280610 141280786 -111975797 - FAM SINE Alu -5 170 1 872 262 78 32 chr2 141280786 141280832 -111975751 - MER69 DNA AcHobo -1172 54 12 2066 224 93 54 chr2 141281353 141282056 -111974527 - L1ME1 LINE L1 -139 6027 5353 2186 112 3 20 chr2 141282056 141282360 -111974223 - AluSx SINE Alu -13 299 1 2066 224 93 54 chr2 141282360 141283015 -111973568 - L1ME1 LINE L1 -813 5353 4725 1867 160 0 14 chr2 141283015 141283308 -111973275 + AluJo SINE Alu 1 289 -23 2139 108 24 3 chr2 141283316 141283604 -111972979 + AluSq SINE Alu 1 294 -19 2066 224 93 54 chr2 141283604 141283693 -111972890 - L1ME1 LINE L1 -1447 4719 4461 264 157 0 133 chr2 141283696 141283779 -111972804 - L1MC/D LINE L1 -2385 5610 5539 2032 113 0 62 chr2 141284331 141284651 -111971932 - AluSx SINE Alu -12 300 1 6859 38 7 1 chr2 141284663 141285534 -111971049 - L1PA5 LINE L1 0 6154 5279 934 201 58 25 chr2 141285535 141285809 -111970774 + L1M4 LINE L1 4438 4720 -1426 785 249 129 62 chr2 141285855 141285997 -111970586 + L1MC5 LINE L1 6991 7122 -839 2025 93 57 14 chr2 141285997 141286277 -111970306 - AluY SINE Alu -19 292 1 785 249 129 62 chr2 141286277 141286683 -111969900 + L1MC5 LINE L1 7122 7576 -385 639 115 0 0 chr2 141286843 141286939 -111969644 - L1PB1 LINE L1 -8 6143 6048 22 88 0 0 chr2 141286976 141287033 -111969550 + AT_rich Low_complexity Low_complexity 1 57 0 968 86 36 0 chr2 141287051 141287190 -111969393 - L1PA10 LINE L1 0 6168 6025 2237 111 3 3 chr2 141287202 141287508 -111969075 + AluSc SINE Alu 1 306 -3 721 201 29 19 chr2 141287515 141287724 -111968859 + L1MC5 LINE L1 7703 7913 -48 21 0 0 0 chr2 141287725 141287746 -111968837 + AT_rich Low_complexity Low_complexity 1 21 0 584 274 148 14 chr2 141287747 141288104 -111968479 + HAL1 LINE L1 1722 2126 -381 397 271 44 109 chr2 141288190 141288402 -111968181 + MIR SINE MIR 20 223 -39 385 280 72 36 chr2 141288402 141288595 -111967988 + L1ME4a LINE L1 5785 5984 -137 7671 27 0 2 chr2 141288648 141289945 -111966638 - L1PA4 LINE L1 0 6155 4860 2351 108 0 0 chr2 141290097 141290403 -111966180 + AluSq SINE Alu 1 306 -7 23 33 0 0 chr2 141290452 141290482 -111966101 + AT_rich Low_complexity Low_complexity 1 30 0 304 312 88 9 chr2 141290673 141290888 -111965695 + L1MC4a LINE L1 5315 5546 -2262 1608 153 17 34 chr2 141290913 141291070 -111965513 - AluJo SINE Alu -22 290 139 2174 109 26 0 chr2 141291070 141291372 -111965211 - AluSx SINE Alu -1 311 2 1608 153 17 34 chr2 141291372 141291509 -111965074 - AluJo SINE Alu -173 139 1 345 252 289 23 chr2 141291686 141291904 -111964679 + L1MC4a LINE L1 5649 5924 -1884 341 288 126 9 chr2 141292193 141292304 -111964279 + L2 LINE L2 3149 3272 0 251 314 133 0 chr2 141294477 141294582 -111962001 - MIR3 SINE MIR -4 204 86 1786 166 0 3 chr2 141294768 141295093 -111961490 - AluSx SINE Alu 0 324 1 205 282 165 12 chr2 141295321 141295406 -111961177 + L3 LINE CR1 488 585 -992 380 339 140 37 chr2 141295406 141295420 -111961163 + L3 LINE CR1 552 563 -1014 1065 80 20 0 chr2 141295420 141295571 -111961012 + L1PA10 LINE L1 6010 6163 -5 2311 79 0 32 chr2 141295574 141295889 -111960694 - AluSc SINE Alu -4 305 1 380 339 140 37 chr2 141295889 141296221 -111960362 + L3 LINE CR1 564 938 -639 308 358 16 8 chr2 141296291 141296414 -111960169 - L2 LINE L2 0 3272 3149 390 99 42 0 chr2 141296567 141296638 -111959945 - L1MB3 LINE L1 -1 6182 6109 783 139 32 97 chr2 141296664 141296880 -111959703 - L1MB3 LINE L1 -1 6182 5981 498 364 97 41 chr2 141297221 141297910 -111958673 - L2 LINE L2 -1863 1451 724 263 373 0 0 chr2 141297913 141297988 -111958595 + L3 LINE CR1 1085 1159 -418 309 248 43 77 chr2 141297996 141298113 -111958470 - L2 LINE L2 -4 3309 3197 646 260 41 12 chr2 141298115 141298284 -111958299 + L3 LINE CR1 1209 1382 -195 16875 69 13 9 chr2 141298622 141301971 -111954612 + L1P2 LINE L1 2317 5685 -469 15410 58 5 0 chr2 141302086 141304898 -111951685 + L1PA6 LINE L1 3327 6153 -1 2558 101 11 14 chr2 141305881 141306246 -111950337 - THE1B LTR MaLR 0 364 1 246 185 19 19 chr2 141306477 141306531 -111950052 + (CATATA)n Simple_repeat Simple_repeat 3 56 0 2378 85 0 7 chr2 141306692 141306997 -111949586 + AluY SINE Alu 1 303 -8 1694 104 20 0 chr2 141307322 141307573 -111949010 + AluSc SINE Alu 1 256 -53 301 239 148 35 chr2 141307791 141307933 -111948650 + L1MC/D LINE L1 5649 5806 -2002 2301 56 0 18 chr2 141307987 141308273 -111948310 - AluY SINE Alu -29 282 2 186 283 0 0 chr2 141309358 141309411 -111947172 - L3 LINE CR1 -730 847 795 2075 149 0 0 chr2 141309411 141309719 -111946864 + AluSg SINE Alu 1 308 -2 1130 173 173 9 chr2 141309783 141310014 -111946569 - AluY SINE Alu 0 311 43 814 228 47 28 chr2 141310133 141310344 -111946239 - MER58A DNA MER1_type 0 224 10 246 295 77 13 chr2 141310870 141311026 -111945557 + MLT1J LTR MaLR 1 166 -345 2248 111 0 0 chr2 141311736 141312043 -111944540 - AluY SINE Alu -2 309 3 2179 110 10 0 chr2 141312045 141312337 -111944246 - AluSq SINE Alu -18 295 1 235 170 43 0 chr2 141312378 141312425 -111944158 - MSTB LTR MaLR 0 426 378 5746 100 2 0 chr2 141312427 141313276 -111943307 + L1P LINE L1 9 859 -5287 890 94 132 0 chr2 141313376 141313535 -111943048 + L1MA3 LINE L1 6126 6305 0 954 179 5 26 chr2 141313550 141313740 -111942843 + AluJo SINE Alu 122 307 -5 1641 196 3 19 chr2 141313746 141314062 -111942521 + AluJo SINE Alu 1 311 -1 2445 77 0 3 chr2 141314639 141314951 -111941632 - AluY SINE Alu 0 311 1 2335 83 3 16 chr2 141315094 141315407 -111941176 - AluY SINE Alu -2 309 1 2300 108 0 0 chr2 141316088 141316384 -111940199 - AluSc SINE Alu -13 296 1 2596 65 0 0 chr2 141316794 141317104 -111939479 - AluY SINE Alu -1 310 1 817 205 0 49 chr2 141317393 141317578 -111939005 + FRAM SINE Alu 1 176 0 2060 104 7 0 chr2 141317693 141318002 -111938581 + AluSx SINE Alu 1 311 0 1782 159 45 0 chr2 141318103 141318393 -111938190 - AluJb SINE Alu -9 303 1 23 101 0 0 chr2 141318395 141318474 -111938109 + AT_rich Low_complexity Low_complexity 1 79 0 788 337 49 49 chr2 141318615 141319092 -111937491 + HAL1 LINE L1 1093 1572 -935 2003 131 0 3 chr2 141319092 141319382 -111937201 - AluSg SINE Alu -21 289 1 788 337 49 49 chr2 141319382 141319516 -111937067 + HAL1 LINE L1 1571 1704 -803 231 200 50 0 chr2 141319731 141319791 -111936792 - L2 LINE L2 -1094 2220 2158 586 185 64 17 chr2 141319794 141319967 -111936616 + L1MB2 LINE L1 5991 6171 0 343 273 11 0 chr2 141319967 141320055 -111936528 - L2 LINE L2 -1178 2136 2048 760 176 23 15 chr2 141320062 141320193 -111936390 + FLAM_C SINE Alu 2 133 0 4260 118 22 15 chr2 141320203 141320668 -111935915 + L1MA3 LINE L1 4612 5072 -1233 2249 111 0 13 chr2 141320668 141320983 -111935600 - AluSx SINE Alu -1 311 1 4260 118 22 15 chr2 141320983 141321776 -111934807 + L1MA3 LINE L1 5072 5881 -424 587 231 41 0 chr2 141321876 141322023 -111934560 + L1MC3 LINE L1 5460 5612 -2173 1992 94 3 38 chr2 141322148 141322263 -111934320 + AluSp SINE Alu 19 136 -177 2451 65 0 0 chr2 141322263 141322557 -111934026 + AluY SINE Alu 1 294 -17 1992 94 3 38 chr2 141322557 141322729 -111933854 + AluSp SINE Alu 136 296 -17 8246 180 57 43 chr2 141322733 141322744 -111933839 + L1MC3 LINE L1 5608 5617 -2168 1748 204 84 27 chr2 141322744 141323186 -111933397 + MLT1C LTR MaLR 1 467 0 8246 180 57 43 chr2 141323186 141324606 -111931977 + L1MC3 LINE L1 5617 7016 -769 3314 82 2 2 chr2 141324606 141325046 -111931537 + MLT2A1 LTR ERVL 1 440 -4 8246 180 57 43 chr2 141325046 141325072 -111931511 + L1MC3 LINE L1 7016 7040 -745 2208 120 3 0 chr2 141325072 141325373 -111931210 + AluSx SINE Alu 3 304 -8 8246 180 57 43 chr2 141325373 141326059 -111930524 + L1MC3 LINE L1 7040 7783 -2 9079 86 0 3 chr2 141326382 141327727 -111928856 + L1P LINE L1 1852 3192 -2954 23595 73 7 2 chr2 141327727 141331061 -111925522 + L1P LINE L1 3 3354 -2792 2000 113 0 40 chr2 141331195 141331495 -111925088 + AluSg SINE Alu 1 288 -22 1617 82 30 39 chr2 141331672 141331903 -111924680 - AluY SINE Alu -26 285 57 4092 159 25 47 chr2 141331903 141332906 -111923677 + MER11C LTR ERVK 3 1071 0 495 78 0 0 chr2 141332906 141332970 -111923613 - AluY SINE Alu -246 64 1 811 174 0 0 chr2 141333118 141333239 -111923344 - FLAM_C SINE Alu -19 124 4 231 235 0 0 chr2 141333425 141333476 -111923107 + (TA)n Simple_repeat Simple_repeat 2 52 0 2040 112 3 68 chr2 141333515 141333838 -111922745 + AluSx SINE Alu 1 302 -10 336 294 101 31 chr2 141333872 141334158 -111922425 - L1 LINE L1 -2230 3916 3611 556 290 81 57 chr2 141334317 141334697 -111921886 + L1MC4a LINE L1 5292 5661 -2147 453 332 19 16 chr2 141334697 141334953 -111921630 - MIR SINE MIR -3 259 3 556 290 81 57 chr2 141334953 141335086 -111921497 + L1MC4a LINE L1 5661 5789 -2019 2195 115 0 16 chr2 141335086 141335400 -111921183 + AluSx SINE Alu 1 309 -3 556 290 81 57 chr2 141335400 141335536 -111921047 + L1MC4a LINE L1 5789 5958 -1850 205 36 0 127 chr2 141335691 141335746 -111920837 + (TAAAAA)n Simple_repeat Simple_repeat 5 52 0 1745 108 0 12 chr2 141335875 141336115 -111920468 + AluSx SINE Alu 60 296 -16 308 296 20 46 chr2 141336629 141336720 -111919863 - L1ME LINE L1 -305 5816 5729 2422 77 0 13 chr2 141336720 141337032 -111919551 - AluY SINE Alu -3 308 1 308 296 20 46 chr2 141337032 141337092 -111919491 - L1ME LINE L1 -392 5729 5669 303 93 0 0 chr2 141337143 141337186 -111919397 + (TCCA)n Simple_repeat Simple_repeat 4 46 0 313 252 47 16 chr2 141337209 141337336 -111919247 - L1ME LINE L1 -468 5653 5523 2489 196 44 33 chr2 141337399 141337922 -111918661 - L1MB7 LINE L1 0 6184 5651 2184 65 41 7 chr2 141337922 141338214 -111918369 - AluY SINE Alu -9 302 1 2489 196 44 33 chr2 141338214 141338323 -111918260 - L1MB7 LINE L1 -533 5651 5545 956 225 27 7 chr2 141338333 141338609 -111917974 + L1M4 LINE L1 2867 3151 -2995 2287 128 0 0 chr2 141338609 141338921 -111917662 + AluSx SINE Alu 1 312 0 956 225 27 7 chr2 141338921 141338937 -111917646 + L1M4 LINE L1 3151 3165 -2981 290 248 0 50 chr2 141338960 141339061 -111917522 + MER69 DNA AcHobo 2431 2526 0 2149 131 3 0 chr2 141339235 141339526 -111917057 - AluSx SINE Alu -20 292 1 257 225 45 56 chr2 141339852 141339941 -111916642 - MIR SINE MIR -8 254 167 742 147 39 0 chr2 141341764 141341893 -111914690 - THE1C LTR MaLR 0 375 242 2017 28 0 0 chr2 141342007 141342262 -111914321 - L1P LINE L1 -3115 3031 2777 224 364 147 8 chr2 141342834 141342963 -111913620 + L2 LINE L2 3121 3267 -5 2117 82 93 0 chr2 141343165 141343445 -111913138 - AluY SINE Alu -5 306 1 2208 104 3 3 chr2 141343954 141344251 -111912332 + AluSx SINE Alu 1 297 -15 25 0 0 0 chr2 141344251 141344276 -111912307 + AT_rich Low_complexity Low_complexity 1 25 0 26 0 0 0 chr2 141344881 141344907 -111911676 + AT_rich Low_complexity Low_complexity 1 26 0 22 56 0 0 chr2 141345193 141345229 -111911354 + AT_rich Low_complexity Low_complexity 1 36 0 25 63 0 38 chr2 141345534 141345613 -111910970 + AT_rich Low_complexity Low_complexity 1 76 0 1795 155 10 14 chr2 141345623 141345914 -111910669 + AluJb SINE Alu 1 290 -22 202 299 149 0 chr2 141346210 141346297 -111910286 - MIR SINE MIR -65 143 44 1639 203 60 18 chr2 141346379 141346833 -111909750 + L1ME1 LINE L1 5688 6160 -6 2317 81 17 0 chr2 141347265 141347561 -111909022 - AluSp SINE Alu -12 301 1 1424 132 28 0 chr2 141348078 141348328 -111908255 + L1MA8 LINE L1 6028 6284 -7 1152 172 142 15 chr2 141348618 141348886 -111907697 - AluJb SINE Alu 0 302 1 19197 38 1 1 chr2 141349010 141353188 -111903395 + L1PA4 LINE L1 1842 6152 -3 2155 151 81 3 chr2 141353188 141353560 -111903023 - MSTA LTR MaLR -27 401 1 7105 171 32 20 chr2 141353567 141355160 -111901423 + L1PB4 LINE L1 3868 5493 -663 1773 177 7 3 chr2 141355160 141355454 -111901129 + AluJb SINE Alu 1 295 -17 7105 171 32 20 chr2 141355454 141356116 -111900467 + L1PB4 LINE L1 5493 6145 -11 22 0 0 0 chr2 141356681 141356703 -111899880 + AT_rich Low_complexity Low_complexity 1 22 0 258 243 142 31 chr2 141357335 141357573 -111899010 + MLT1L LTR MaLR 271 609 -6 29548 35 1 1 chr2 141357969 141362325 -111894258 + L1PA3 LINE L1 1797 6153 -2 1331 153 5 0 chr2 141362359 141362568 -111894015 - MER2 DNA MER2_type -134 211 2 274 345 112 0 chr2 141362790 141362987 -111893596 - L2 LINE L2 -1060 2254 2036 2574 62 0 0 chr2 141363129 141363435 -111893148 - AluY SINE Alu 0 311 6 252 59 0 0 chr2 141363579 141363613 -111892970 + (TG)n Simple_repeat Simple_repeat 2 35 0 1145 167 55 73 chr2 141363637 141363912 -111892671 - MER65A LTR ERV1 -4 441 172 401 117 67 0 chr2 141363936 141363996 -111892587 - MER66A LTR ERV1 -140 338 275 * 914 151 5 80 chr2 141363989 141364188 -111892395 - MER65B LTR ERV1 -346 185 2 344 71 18 0 chr2 141364273 141364329 -111892254 + (TA)n Simple_repeat Simple_repeat 2 58 0 21 0 0 0 chr2 141364488 141364509 -111892074 + AT_rich Low_complexity Low_complexity 1 21 0 228 111 0 0 chr2 141366073 141366109 -111890474 + (T)n Simple_repeat Simple_repeat 1 36 0 1215 240 65 3 chr2 141366358 141366683 -111889900 + L2 LINE L2 1708 2052 -1262 494 278 71 28 chr2 141366714 141366966 -111889617 + HAL1 LINE L1 97 359 -2148 1366 179 8 4 chr2 141367065 141367299 -111889284 - MLT1C LTR MaLR -4 463 229 1910 136 31 0 chr2 141367415 141367701 -111888882 - AluSx SINE Alu -17 295 1 1511 144 111 11 chr2 141368132 141368403 -111888180 - AluJo SINE Alu -14 298 1 2346 55 38 3 chr2 141368403 141368691 -111887892 - AluY SINE Alu -12 299 1 1206 181 77 91 chr2 141368808 141369024 -111887559 - MLT1A1 LTR MaLR 0 365 155 1886 143 35 0 chr2 141369024 141369311 -111887272 - AluSx SINE Alu -13 299 3 1206 181 77 91 chr2 141369311 141369458 -111887125 - MLT1A1 LTR MaLR -210 155 7 1710 143 84 31 chr2 141370098 141370454 -111886129 - THE1C LTR MaLR 0 375 1 2246 89 6 3 chr2 141370707 141371023 -111885560 + L1PB1 LINE L1 5834 6150 -1 186 43 0 0 chr2 141371154 141371177 -111885406 + (A)n Simple_repeat Simple_repeat 1 23 0 1493 68 15 0 chr2 141372419 141372625 -111883958 - L1MA2 LINE L1 0 6304 6096 25 0 0 0 chr2 141373596 141373621 -111882962 + AT_rich Low_complexity Low_complexity 1 25 0 45 0 0 18 chr2 141374152 141374180 -111882403 + AT_rich Low_complexity Low_complexity 1 28 -27 2318 72 0 10 chr2 141374180 141374470 -111882113 - AluY SINE Alu -24 287 1 45 0 0 18 chr2 141374470 141374497 -111882086 + AT_rich Low_complexity Low_complexity 28 55 0 1150 164 0 0 chr2 141375923 141376100 -111880483 - AluSg/x SINE Alu -13 297 121 24 32 0 0 chr2 141376101 141376132 -111880451 + AT_rich Low_complexity Low_complexity 1 31 0 2348 85 13 0 chr2 141376132 141376438 -111880145 - AluSg SINE Alu 0 310 1 1988 120 0 23 chr2 141376441 141376741 -111879842 - AluSx SINE Alu -19 293 1 618 113 0 0 chr2 141377048 141377145 -111879438 + (TTCC)n Simple_repeat Simple_repeat 2 98 0 289 196 0 0 chr2 141377146 141377202 -111879381 - AluJo SINE Alu -5 297 242 925 194 6 6 chr2 141377202 141377377 -111879206 - AluJo SINE Alu -101 211 37 193 328 33 0 chr2 141377406 141377467 -111879116 - MER5A DNA MER1_type -86 103 41 1087 144 6 0 chr2 141377867 141378027 -111878556 + FRAM SINE Alu 1 153 -23 389 248 0 51 chr2 141378183 141378300 -111878283 - L1MC4 LINE L1 0 8042 7932 738 186 8 0 chr2 141378422 141378551 -111878032 + FLAM_A SINE Alu 4 133 0 2403 90 0 0 chr2 141378989 141379290 -111877293 - AluY SINE Alu -10 301 1 1699 125 59 28 chr2 141380127 141380246 -111876337 + AluJo SINE Alu 1 115 -197 234 0 0 0 chr2 141380246 141380272 -111876311 + (CAAA)n Simple_repeat Simple_repeat 4 29 0 1699 125 59 28 chr2 141380272 141380441 -111876142 + AluJo SINE Alu 115 298 -14 2289 78 3 0 chr2 141380475 141380782 -111875801 - AluY SINE Alu 0 308 1 2088 121 0 7 chr2 141380812 141381110 -111875473 - AluSq SINE Alu -17 296 1 1524 212 19 3 chr2 141381551 141381905 -111874678 - AluJo SINE Alu 0 359 1 1540 209 62 25 chr2 141382043 141382444 -111874139 - LTR52 LTR ERVL -2 419 4 1720 141 7 50 chr2 141383495 141383611 -111872972 + AluSx SINE Alu 1 121 -191 2204 97 10 0 chr2 141383611 141383909 -111872674 + AluSx SINE Alu 1 301 -11 1720 141 7 50 chr2 141383909 141384090 -111872493 + AluSx SINE Alu 121 285 -27 1276 122 16 0 chr2 141384289 141384477 -111872106 + AluSc SINE Alu 117 307 -2 850 186 42 6 chr2 141384478 141384645 -111871938 - MLT1C LTR MaLR -282 185 13 2813 267 84 64 chr2 141384657 141385470 -111871113 + HAL1 LINE L1 472 1267 -1240 1899 159 0 0 chr2 141385470 141385760 -111870823 + AluSx SINE Alu 1 290 -22 2813 267 84 64 chr2 141385760 141386579 -111870004 + HAL1 LINE L1 1267 2068 -439 11166 190 30 38 chr2 141386579 141387394 -111869189 + L1PA15 LINE L1 2859 3680 -2485 198 0 0 0 chr2 141387394 141387416 -111869167 + (CAA)n Simple_repeat Simple_repeat 3 24 0 11166 190 30 38 chr2 141387416 141387567 -111869016 + L1PA15 LINE L1 3680 3831 -2334 2279 96 0 10 chr2 141387567 141387881 -111868702 + AluY SINE Alu 1 311 0 432 0 0 0 chr2 141387883 141387931 -111868652 + (TA)n Simple_repeat Simple_repeat 2 49 0 11166 190 30 38 chr2 141387931 141389180 -111867403 + L1PA15 LINE L1 3832 5070 -1095 1884 135 62 3 chr2 141389180 141389469 -111867114 + AluSx SINE Alu 1 306 -6 11166 190 30 38 chr2 141389469 141390552 -111866031 + L1PA15 LINE L1 5070 6161 -4 2813 267 84 64 chr2 141390552 141390753 -111865830 + HAL1 LINE L1 2068 2343 -164 1698 166 40 17 chr2 141390920 141391222 -111865361 + AluJb SINE Alu 1 309 -3 307 267 167 0 chr2 141391540 141391660 -111864923 + L3 LINE CR1 1251 1390 -187 947 228 39 63 chr2 141391674 141392008 -111864575 + L1ME3A LINE L1 4730 5055 -1091 1439 181 3 62 chr2 141392025 141392313 -111864270 + AluJo SINE Alu 14 284 -28 252 229 49 8 chr2 141392313 141392435 -111864148 + (TA)n Simple_repeat Simple_repeat 2 128 0 1228 218 97 5 chr2 141392435 141392928 -111863655 + L1ME3A LINE L1 5060 5601 -563 2204 94 3 3 chr2 141392988 141393275 -111863308 + AluSp SINE Alu 1 287 -26 1475 149 18 0 chr2 141394202 141394430 -111862153 + AluJb SINE Alu 75 306 -6 2132 107 0 47 chr2 141394589 141394734 -111861849 + AluSx SINE Alu 1 151 -161 2161 101 7 7 chr2 141394734 141395030 -111861553 + AluSc SINE Alu 1 296 -13 2132 107 0 47 chr2 141395030 141395202 -111861381 + AluSx SINE Alu 151 303 -9 6452 79 46 3 chr2 141396002 141397392 -111859191 - L1PA14 LINE L1 0 6161 4746 2624 176 6 2 chr2 141397396 141397895 -111858688 + L1PA14 LINE L1 4253 4753 -1393 1373 270 36 21 chr2 141397896 141397985 -111858598 + L1ME3A LINE L1 5692 5778 -392 2239 92 0 0 chr2 141397985 141398266 -111858317 - AluSg SINE Alu -20 290 10 1373 270 36 21 chr2 141398266 141398643 -111857940 + L1ME3A LINE L1 5778 6165 -5 1614 187 21 4 chr2 141398786 141399243 -111857340 + MLT2B1 LTR ERVL 5 518 -2 1938 117 0 0 chr2 141399278 141399543 -111857040 + AluSq SINE Alu 39 303 -10 227 277 48 0 chr2 141399674 141399757 -111856826 - HAL1 LINE L1 -160 2347 2261 242 227 0 0 chr2 141399911 141399955 -111856628 - MER5B DNA MER1_type -125 53 10 627 237 5 70 chr2 141400680 141400866 -111855717 - MER5B DNA MER1_type -3 175 2 699 100 0 33 chr2 141401291 141401431 -111855152 + AluSg/x SINE Alu 94 291 -19 341 299 0 0 chr2 141401433 141401500 -111855083 + Tigger2 DNA MER2_type 2652 2718 0 1733 189 22 25 chr2 141401520 141401875 -111854708 + MLT1E3 LTR MaLR 270 623 -1 1749 245 44 34 chr2 141401893 141402484 -111854099 + L1ME1 LINE L1 1123 1719 -4665 28 29 0 0 chr2 141402510 141402545 -111854038 + AT_rich Low_complexity Low_complexity 1 35 0 267 200 15 0 chr2 141402750 141402815 -111853768 + L1ME1 LINE L1 2187 2252 -4311 385 234 32 0 chr2 141402896 141402990 -111853593 + L1MD3 LINE L1 7534 7630 -365 6693 64 0 33 chr2 141403003 141403851 -111852732 + L1PA6 LINE L1 4933 5738 -416 2413 97 0 0 chr2 141403851 141404160 -111852423 + AluY SINE Alu 1 309 -2 6693 64 0 33 chr2 141404160 141404564 -111852019 + L1PA6 LINE L1 5738 6154 0 1134 196 30 4 chr2 141404632 141404862 -111851721 + L1MD3 LINE L1 7541 7776 -219 * 2527 213 54 57 chr2 141404847 141405838 -111850745 + L1ME1 LINE L1 5421 6396 -6 2349 286 77 61 chr2 141405875 141406178 -111850405 - L2 LINE L2 -1315 1999 1702 1958 143 3 0 chr2 141406178 141406465 -111850118 + AluSx SINE Alu 1 288 -24 2349 286 77 61 chr2 141406465 141406612 -111849971 - L2 LINE L2 -1612 1702 1559 2361 108 0 0 chr2 141406612 141406919 -111849664 + AluSg SINE Alu 1 307 -3 2349 286 77 61 chr2 141406919 141406939 -111849644 - L2 LINE L2 -1755 1559 1541 2360 94 0 3 chr2 141406939 141407246 -111849337 + AluSq SINE Alu 1 306 -7 2349 286 77 61 chr2 141407246 141407879 -111848704 - L2 LINE L2 -1773 1541 876 558 260 137 77 chr2 141407880 141408051 -111848532 - HAL1 LINE L1 -1202 1305 1146 2166 92 26 13 chr2 141408051 141408355 -111848228 - AluSx SINE Alu -4 308 1 558 260 137 77 chr2 141408355 141408549 -111848034 - HAL1 LINE L1 -1361 1146 918 1010 254 95 67 chr2 141409858 141410259 -111846324 + MLT1G1 LTR MaLR 1 412 -183 2317 107 0 0 chr2 141410354 141410654 -111845929 + AluSx SINE Alu 1 300 -12 478 237 140 39 chr2 141410664 141410777 -111845806 - MIR SINE MIR 0 262 162 1470 208 57 0 chr2 141410777 141411056 -111845527 - AluJo SINE Alu -15 297 3 478 237 140 39 chr2 141411056 141411149 -111845434 - MIR SINE MIR -100 162 35 640 115 29 0 chr2 141411205 141411309 -111845274 + AluY SINE Alu 205 311 0 917 239 40 4 chr2 141411324 141411550 -111845033 - MIR SINE MIR 0 262 29 1043 255 104 83 chr2 141411593 141412296 -111844287 + L1MEc LINE L1 45 782 -5614 2196 128 0 0 chr2 141412296 141412608 -111843975 + AluSx SINE Alu 1 312 0 1043 255 104 83 chr2 141412608 141413017 -111843566 + L1MEc LINE L1 782 1181 -5215 2335 84 72 3 chr2 141413040 141413372 -111843211 - THE1A LTR MaLR 0 355 1 11549 88 19 0 chr2 141413372 141414919 -111841664 - THE1A-int LTR MaLR 0 1580 4 2191 100 13 13 chr2 141414921 141415231 -111841352 - THE1A LTR MaLR 0 355 46 594 91 0 0 chr2 141415259 141415336 -111841247 - THE1A LTR MaLR -278 77 1 26 30 0 0 chr2 141415429 141415462 -111841121 + AT_rich Low_complexity Low_complexity 1 33 0 2859 133 7 2 chr2 141415462 141415905 -111840678 - L1PB3 LINE L1 -7 6147 5703 2238 119 3 0 chr2 141416190 141416502 -111840081 - AluSq SINE Alu 0 313 1 2519 64 0 10 chr2 141416596 141416908 -111839675 - AluY SINE Alu -2 309 1 352 282 65 32 chr2 141417203 141417327 -111839256 - MLT1J2 LTR MaLR -70 380 253 641 211 0 16 chr2 141417375 141417503 -111839080 - MLT1J1 LTR MaLR -306 140 15 242 229 16 16 chr2 141417895 141417956 -111838627 - L2 LINE L2 -905 2409 2349 2543 178 86 4 chr2 141417960 141418747 -111837836 - L1MB7 LINE L1 -19 6165 5179 2460 199 101 25 chr2 141418748 141419470 -111837113 - L1M4 LINE L1 -802 5344 4568 312 265 12 12 chr2 141419931 141420014 -111836569 - MIR SINE MIR -92 116 34 2100 120 0 23 chr2 141421279 141421579 -111835004 - AluSx SINE Alu -17 295 3 26 30 0 0 chr2 141421833 141421866 -111834717 + AT_rich Low_complexity Low_complexity 1 33 0 720 251 15 5 chr2 141421893 141422096 -111834487 - MER3 DNA MER1_type 0 209 5 2085 128 0 3 chr2 141422302 141422599 -111833984 + AluSp SINE Alu 1 296 -17 407 297 131 0 chr2 141422778 141422953 -111833630 + MIR SINE MIR 51 248 -14 316 82 33 33 chr2 141423538 141423599 -111832984 + (TTCC)n Simple_repeat Simple_repeat 4 64 0 2085 117 27 0 chr2 141423608 141423907 -111832676 - AluSq SINE Alu -6 307 1 696 210 0 0 chr2 141424061 141424185 -111832398 + FLAM_A SINE Alu 1 124 -9 270 225 25 25 chr2 141424259 141424339 -111832244 + L1MC5 LINE L1 7828 7907 -54 2188 103 3 0 chr2 141424437 141424729 -111831854 - AluSq SINE Alu -18 295 3 24 0 0 0 chr2 141425195 141425219 -111831364 + AT_rich Low_complexity Low_complexity 1 24 0 567 280 144 11 chr2 141425420 141425691 -111830892 + MER102a DNA MER1_type 3 309 -21 2251 105 6 1 chr2 141426587 141426970 -111829613 + L1MC/D LINE L1 5042 5437 -745 2523 81 0 0 chr2 141427115 141427425 -111829158 + AluSx SINE Alu 1 310 -2 410 344 63 21 chr2 141427498 141427687 -111828896 + MIR3 SINE MIR 3 199 -9 1729 144 68 4 chr2 141427695 141427973 -111828610 - AluJb SINE Alu -16 296 1 427 320 105 26 chr2 141428462 141428768 -111827815 + L2 LINE L2 1442 1771 -1543 293 273 154 9 chr2 141428845 141428955 -111827628 + MIR SINE MIR 23 148 -114 185 329 57 0 chr2 141429560 141429630 -111826953 + L2 LINE L2 3187 3260 -12 21 0 0 0 chr2 141430003 141430024 -111826559 + AT_rich Low_complexity Low_complexity 1 21 0 240 149 0 0 chr2 141430237 141430284 -111826299 + (CA)n Simple_repeat Simple_repeat 2 48 0 25 31 0 0 chr2 141430486 141430518 -111826065 + AT_rich Low_complexity Low_complexity 1 32 0 2392 66 3 7 chr2 141430745 141431050 -111825533 + AluY SINE Alu 1 304 -7 2146 122 3 0 chr2 141431057 141431351 -111825232 + AluSx SINE Alu 1 295 -17 2084 95 27 3 chr2 141431418 141431714 -111824869 + AluSp SINE Alu 1 303 -10 22 56 0 0 chr2 141431748 141431784 -111824799 + AT_rich Low_complexity Low_complexity 1 36 0 383 130 0 14 chr2 141432181 141432250 -111824333 + (TTCC)n Simple_repeat Simple_repeat 2 69 0 198 143 0 0 chr2 141432254 141432289 -111824294 + (TCCA)n Simple_repeat Simple_repeat 2 36 0 351 226 98 10 chr2 141432326 141432428 -111824155 - L1ME2 LINE L1 -213 5951 5841 1524 219 106 46 chr2 141432435 141433173 -111823410 - L1ME2 LINE L1 -375 5789 4987 678 13 0 0 chr2 141433173 141433252 -111823331 + (TA)n Simple_repeat Simple_repeat 2 80 0 1524 219 106 46 chr2 141433252 141433426 -111823157 - L1ME2 LINE L1 -1177 4987 4825 364 343 43 37 chr2 141433513 141433840 -111822743 - L1MEd LINE L1 -5784 335 7 2128 122 0 7 chr2 141434536 141434839 -111821744 + AluY SINE Alu 1 301 -10 1131 126 13 0 chr2 141434839 141434998 -111821585 + AluSg/x SINE Alu 134 294 -18 4890 145 39 7 chr2 141435224 141436141 -111820442 - L1MA4 LINE L1 -166 6134 5192 275 296 126 43 chr2 141436109 141436571 -111820012 - HAL1b LINE L1 -778 570 71 * 2013 33 8 0 chr2 141436882 141437122 -111819461 - L1PA3 LINE L1 -3 6152 5911 273 229 0 36 chr2 141437418 141437527 -111819056 + (TATAA)n Simple_repeat Simple_repeat 1 105 0 289 215 0 0 chr2 141437539 141437604 -111818979 + Tigger1 DNA MER2_type 4 68 -2350 255 229 0 36 chr2 141437782 141437865 -111818718 + (TATAA)n Simple_repeat Simple_repeat 5 84 0 13612 122 20 14 chr2 141437877 141439540 -111817043 + Tigger1 DNA MER2_type 4 1686 -732 2007 125 10 17 chr2 141439540 141439837 -111816746 + AluSx SINE Alu 3 297 -15 13612 122 20 14 chr2 141439837 141440318 -111816265 + Tigger1 DNA MER2_type 1686 2162 -256 1285 161 50 4 chr2 141440483 141440725 -111815858 + Tigger1 DNA MER2_type 2166 2418 0 551 60 12 0 chr2 141441136 141441220 -111815363 + (TTTTG)n Simple_repeat Simple_repeat 3 87 0 86 10 0 10 chr2 141441277 141441310 -111815273 + AT_rich Low_complexity Low_complexity 1 33 -70 1936 129 7 7 chr2 141441310 141441590 -111814993 - AluSx SINE Alu -23 289 10 86 10 0 10 chr2 141441590 141441660 -111814923 + AT_rich Low_complexity Low_complexity 33 103 0 16905 31 3 0 chr2 141442172 141444227 -111812356 + L1P LINE L1 2585 4646 -1500 2440 86 0 0 chr2 141444411 141444715 -111811868 - AluY SINE Alu -7 304 1 2404 73 7 0 chr2 141445832 141446134 -111810449 + AluY SINE Alu 1 304 -7 1186 170 30 9 chr2 141446644 141446874 -111809709 - L1MB3 LINE L1 -53 6130 5896 1607 187 0 20 chr2 141447523 141447817 -111808766 + AluJb SINE Alu 8 295 -17 1914 200 78 0 chr2 141447965 141448360 -111808223 + MSTB LTR MaLR 1 426 0 21 0 0 0 chr2 141449388 141449409 -111807174 + AT_rich Low_complexity Low_complexity 1 21 0 2274 115 0 0 chr2 141449409 141449713 -111806870 + AluSx SINE Alu 1 304 -8 508 244 59 83 chr2 141449757 141450166 -111806417 + L1MC5 LINE L1 7528 7926 -35 1763 167 0 52 chr2 141450305 141450629 -111805954 - AluJb SINE Alu 0 312 6 233 320 86 40 chr2 141451126 141451301 -111805282 + LTR33 LTR ERVL 336 518 -3 1578 198 26 10 chr2 141451325 141451628 -111804955 + AluJo SINE Alu 1 308 -4 227 190 17 0 chr2 141451770 141451828 -111804755 + (TA)n Simple_repeat Simple_repeat 2 60 0 404 251 40 70 chr2 141451937 141452136 -111804447 - L1ME3A LINE L1 -70 6100 5908 * 606 201 85 93 chr2 141452134 141452393 -111804190 - L1ME3A LINE L1 -213 5957 5701 333 209 40 0 chr2 141452431 141452579 -111804004 + (TA)n Simple_repeat Simple_repeat 1 154 0 477 258 40 27 chr2 141452582 141452806 -111803777 - L1ME3A LINE L1 -523 5647 5414 2038 83 9 98 chr2 141452971 141453298 -111803285 + AluSx SINE Alu 1 298 -14 2190 83 13 30 chr2 141453558 141453860 -111802723 - AluY SINE Alu -14 297 1 22921 30 2 2 chr2 141454237 141457804 -111798779 - L1PA3 LINE L1 -5 6150 2585 546 255 99 11 chr2 141457939 141458295 -111798288 - L1MEd LINE L1 -4862 1257 947 2604 238 48 64 chr2 141458311 141458862 -111797721 - L1ME3A LINE L1 0 6170 5612 1806 180 123 17 chr2 141458862 141459284 -111797299 - MLT1C LTR MaLR 0 467 1 2604 238 48 64 chr2 141459284 141459817 -111796766 - L1ME3A LINE L1 -558 5612 5072 6446 109 49 16 chr2 141459817 141460849 -111795734 - MER11C LTR ERVK -4 1067 1 2604 238 48 64 chr2 141460849 141460978 -111795605 - L1ME3A LINE L1 -1098 5072 4943 288 0 0 0 chr2 141460978 141461010 -111795573 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 2604 238 48 64 chr2 141461010 141461030 -111795553 - L1ME3A LINE L1 -1227 4943 4924 1950 122 14 0 chr2 141461030 141461308 -111795275 - AluSx SINE Alu -30 282 1 2604 238 48 64 chr2 141461308 141461451 -111795132 - L1ME3A LINE L1 -1246 4924 4780 998 201 20 0 chr2 141461451 141461655 -111794928 + MER3 DNA MER1_type 2 209 0 2604 238 48 64 chr2 141461655 141461987 -111794596 - L1ME3A LINE L1 -1390 4780 4487 433 306 79 77 chr2 141462383 141462666 -111793917 - L1MEd LINE L1 -5167 952 666 2477 83 0 3 chr2 141462666 141462978 -111793605 - AluSq SINE Alu -2 311 1 433 306 79 77 chr2 141462978 141463034 -111793549 - L1MEd LINE L1 -5453 666 612 298 341 0 0 chr2 141463043 141463131 -111793452 - L1MEd LINE L1 -5566 553 466 426 286 55 20 chr2 141463182 141463381 -111793202 - L1ME2 LINE L1 -6 6158 5953 508 192 9 145 chr2 141463422 141463636 -111792947 - L1MC4 LINE L1 -6 8036 7852 461 48 0 0 chr2 141463648 141463710 -111792873 + MER41B LTR ERV1 481 542 -93 538 261 49 25 chr2 141463742 141463821 -111792762 - L1MC4 LINE L1 -205 7837 7761 1496 229 26 3 chr2 141463821 141464126 -111792457 - AluJo SINE Alu 0 312 1 538 261 49 25 chr2 141464126 141464291 -111792292 - L1MC4 LINE L1 -281 7761 7587 349 261 197 47 chr2 141464301 141464681 -111791902 - L1MC4 LINE L1 -516 7526 7090 229 102 61 0 chr2 141464681 141464730 -111791853 + CT-rich Low_complexity Low_complexity 4 55 0 1005 57 0 0 chr2 141464743 141464866 -111791717 - AluY SINE Alu -2 309 187 342 115 0 0 chr2 141464887 141464939 -111791644 + (TCCC)n Simple_repeat Simple_repeat 4 55 0 2364 81 3 3 chr2 141465085 141465394 -111791189 - AluY SINE Alu -2 309 1 22 0 0 0 chr2 141465662 141465684 -111790899 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 141466476 141466497 -111790086 + AT_rich Low_complexity Low_complexity 1 21 0 882 57 32 0 chr2 141467035 141467158 -111789425 + MER4E LTR ERV1 640 766 0 253 95 48 0 chr2 141467158 141467200 -111789383 + MER4E-int LTR ERV1 1 44 -6714 2071 120 41 0 chr2 141467231 141467523 -111789060 + AluSx SINE Alu 1 304 -8 22 0 0 0 chr2 141467563 141467585 -111788998 + AT_rich Low_complexity Low_complexity 1 22 0 314 271 129 79 chr2 141468007 141468095 -111788488 + MIR SINE MIR 11 93 -169 1745 176 10 7 chr2 141468095 141468401 -111788182 - AluJb SINE Alu -5 307 1 314 271 129 79 chr2 141468401 141468552 -111788031 + MIR SINE MIR 93 262 0 255 264 35 58 chr2 141468997 141469084 -111787499 + L2 LINE L2 3211 3295 -18 1553 86 29 20 chr2 141469232 141469458 -111787125 - MER4E LTR ERV1 -520 246 16 2467 88 0 0 chr2 141469458 141469764 -111786819 + AluSx SINE Alu 1 306 -6 1553 86 29 20 chr2 141469764 141469781 -111786802 - MER4E LTR ERV1 -750 16 1 963 189 25 37 chr2 141469799 141470043 -111786540 - L1MB2 LINE L1 -95 6076 5836 2290 108 0 0 chr2 141470049 141470356 -111786227 - AluSq SINE Alu -6 307 1 334 137 0 0 chr2 141470358 141470409 -111786174 - L1MB2 LINE L1 -500 5671 5621 343 275 119 23 chr2 141470742 141470960 -111785623 - L1MB2 LINE L1 -841 5305 5067 28 61 0 0 chr2 141470961 141471010 -111785573 + AT_rich Low_complexity Low_complexity 1 49 0 23 0 0 0 chr2 141471104 141471127 -111785456 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 141471518 141471539 -111785044 + AT_rich Low_complexity Low_complexity 1 21 0 1918 122 0 0 chr2 141471769 141472024 -111784559 + AluSx SINE Alu 1 255 -57 877 300 121 19 chr2 141473174 141473537 -111783046 + L2 LINE L2 2911 3310 -3 1846 141 0 27 chr2 141473768 141474066 -111782517 - AluSx SINE Alu -22 290 1 544 191 99 19 chr2 141474286 141474448 -111782135 + MER110 LTR ERV1 317 491 0 401 216 23 0 chr2 141474617 141474705 -111781878 - L1MB7 LINE L1 -188 5996 5907 299 185 0 0 chr2 141474712 141474766 -111781817 + FLAM_A SINE Alu 59 112 -21 2384 97 0 19 chr2 141474766 141475085 -111781498 - AluSq SINE Alu 0 313 1 1069 219 77 47 chr2 141475493 141475924 -111780659 + L1ME2 LINE L1 5692 6139 -25 345 261 112 0 chr2 141476149 141476283 -111780300 + HAL1 LINE L1 1487 1635 -872 2236 83 4 4 chr2 141476287 141476565 -111780018 + AluSc SINE Alu 1 278 -31 906 182 6 1 chr2 141476669 141477883 -111778700 + ALR/Alpha Satellite centromeric 1 1219 -36 2223 162 45 88 chr2 141477986 141478170 -111778413 - L1MB8 LINE L1 -200 5978 5788 1596 194 40 0 chr2 141478170 141478443 -111778140 - AluJb SINE Alu -28 284 1 2223 162 45 88 chr2 141478443 141478862 -111777721 - L1MB8 LINE L1 -390 5788 5401 2343 90 10 3 chr2 141478868 141479168 -111777415 - AluSc SINE Alu -7 302 1 868 171 66 113 chr2 141479273 141479547 -111777036 - MLT1B LTR MaLR 0 390 130 3363 156 34 6 chr2 141479547 141480189 -111776394 + L1MB7 LINE L1 5525 6184 0 2156 89 7 0 chr2 141480198 141480508 -111776075 + AluSx SINE Alu 1 312 0 1654 179 31 7 chr2 141481018 141481308 -111775275 + AluJo SINE Alu 1 297 -15 2091 119 0 45 chr2 141481692 141482004 -111774579 + AluSx SINE Alu 1 298 -14 701 302 120 38 chr2 141484633 141485166 -111771417 - L1MC4 LINE L1 -196 7846 7270 242 286 16 32 chr2 141485190 141485316 -111771267 + L1MEc LINE L1 1535 1658 -4738 273 344 73 7 chr2 141485702 141485853 -111770730 - MIR SINE MIR -100 162 2 363 270 58 71 chr2 141486104 141486330 -111770253 + L1MB8 LINE L1 5807 6029 -149 1675 153 14 34 chr2 141486897 141487192 -111769391 + AluJb SINE Alu 5 293 -19 22 35 0 0 chr2 141487983 141488012 -111768571 + AT_rich Low_complexity Low_complexity 1 29 0 41 44 5 0 chr2 141488151 141488263 -111768320 + AT_rich Low_complexity Low_complexity 1 69 0 2270 114 0 0 chr2 141488508 141488805 -111767778 + AluSg SINE Alu 1 297 -13 197 343 0 0 chr2 141488963 141489030 -111767553 - L2 LINE L2 -89 3224 3158 550 338 65 31 chr2 141489121 141489323 -111767260 - L2 LINE L2 -231 3082 2864 2050 157 3 0 chr2 141489323 141489623 -111766960 + AluSx SINE Alu 1 301 -11 550 338 65 31 chr2 141489623 141489751 -111766832 - L2 LINE L2 -449 2864 2742 637 232 26 0 chr2 141489783 141489934 -111766649 - MER3 DNA MER1_type -53 156 2 261 216 20 0 chr2 141489934 141489985 -111766598 - L2 LINE L2 -565 2749 2698 398 313 185 16 chr2 141490208 141490575 -111766008 - L2 LINE L2 -639 2675 2247 21 0 0 0 chr2 141490822 141490843 -111765740 + AT_rich Low_complexity Low_complexity 1 21 0 1019 174 92 9 chr2 141490891 141491109 -111765474 + AluJo SINE Alu 2 237 -75 21 0 0 0 chr2 141493430 141493451 -111763132 + AT_rich Low_complexity Low_complexity 1 21 0 416 286 103 28 chr2 141493504 141493903 -111762680 + L1MEc LINE L1 2212 2640 -3575 391 263 120 5 chr2 141493994 141494203 -111762380 + L1MEc LINE L1 3690 3922 -2293 * 1992 223 21 8 chr2 141494201 141494685 -111761898 + L1MEc LINE L1 4698 5187 -1028 * 23364 122 86 75 chr2 141494680 141499711 -111756872 - L1P LINE L1 -1049 5097 12 181 330 10 72 chr2 141499718 141499815 -111756768 - MIR SINE MIR -168 94 4 1333 148 120 0 chr2 141500040 141500324 -111756259 + L1MD1 LINE L1 5905 6222 -20 430 189 33 22 chr2 141500368 141500458 -111756125 + AluJb SINE Alu 140 230 -82 302 296 12 12 chr2 141500682 141500763 -111755820 - L2 LINE L2 -1 3312 3232 210 208 208 13 chr2 141501005 141501082 -111755501 + L2 LINE L2 1930 2021 -1293 1925 121 3 39 chr2 141501101 141501406 -111755177 + AluSx SINE Alu 1 294 -18 1459 174 0 56 chr2 141501406 141501582 -111755001 - AluJo SINE Alu -8 304 146 1518 120 0 0 chr2 141501582 141501798 -111754785 - AluSg/x SINE Alu -10 300 85 1459 174 0 56 chr2 141501798 141501898 -111754685 - AluJo SINE Alu -166 146 42 470 368 36 16 chr2 141501966 141502219 -111754364 - MIR SINE MIR -3 259 2 1786 116 67 4 chr2 141502266 141502555 -111754028 + AluSq SINE Alu 1 306 0 4800 77 3 2 chr2 141502883 141503469 -111753114 + LTR14C LTR ERVK 1 587 0 1187 77 0 0 chr2 141503516 141503659 -111752924 + AluSq/x SINE Alu 1 143 -170 545 97 0 0 chr2 141503659 141503731 -111752852 + Alu SINE Alu 228 299 -10 608 261 125 64 chr2 141504005 141504350 -111752233 + L2 LINE L2 2275 2640 -674 658 206 28 7 chr2 141504561 141504702 -111751881 - MIR SINE MIR -23 239 96 1037 80 120 0 chr2 141504803 141504953 -111751630 + AluYa5 SINE Alu 131 298 -13 21 36 0 0 chr2 141506302 141506330 -111750253 + GC_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr2 141507270 141507302 -111749281 + AT_rich Low_complexity Low_complexity 1 32 0 698 190 0 0 chr2 141507903 141508019 -111748564 + FLAM_A SINE Alu 19 134 -8 365 188 59 147 chr2 141508225 141508322 -111748261 + MIR SINE MIR 108 185 -77 2141 84 30 3 chr2 141508322 141508618 -111747965 + AluSp SINE Alu 1 304 -9 365 188 59 147 chr2 141508618 141508690 -111747893 + MIR SINE MIR 185 262 0 2102 110 4 0 chr2 141509942 141510268 -111746315 + AluSg SINE Alu 1 327 0 1357 203 13 43 chr2 141510865 141511170 -111745413 - AluJo SINE Alu -16 296 1 2022 140 3 16 chr2 141511466 141511773 -111744810 + MER1B DNA MER1_type 37 339 0 24 0 0 0 chr2 141511893 141511917 -111744666 + AT_rich Low_complexity Low_complexity 1 24 0 2254 120 3 3 chr2 141512001 141512309 -111744274 - AluSx SINE Alu -4 308 1 618 14 0 0 chr2 141512332 141512403 -111744180 + (TTTTA)n Simple_repeat Simple_repeat 3 73 0 978 137 0 0 chr2 141512404 141512543 -111744040 - AluSg/x SINE Alu -36 276 138 633 169 59 29 chr2 141512619 141512717 -111743866 + L1MD2 LINE L1 5729 5823 -536 5934 160 69 31 chr2 141512717 141513339 -111743244 - Tigger3b DNA MER2_type -1797 1231 634 2248 91 0 20 chr2 141513339 141513637 -111742946 - AluSq SINE Alu -21 292 1 237 33 0 0 chr2 141513642 141513672 -111742911 + (TTG)n Simple_repeat Simple_repeat 2 31 0 5934 160 69 31 chr2 141513672 141514229 -111742354 - Tigger3b DNA MER2_type -2397 631 1 633 169 59 29 chr2 141514229 141514266 -111742317 + L1MD2 LINE L1 5823 5868 -491 4036 134 67 61 chr2 141514267 141515075 -111741508 - Tigger1 DNA MER2_type 0 2418 1606 305 53 0 0 chr2 141515118 141515156 -111741427 - Tigger1 DNA MER2_type -798 1620 1583 598 216 0 27 chr2 141515157 141515268 -111741315 - FRAM SINE Alu -23 153 46 759 164 9 0 chr2 141515298 141515437 -111741146 - FLAM_C SINE Alu 0 144 5 2784 132 24 22 chr2 141515437 141515928 -111740655 - Tigger1 DNA MER2_type -830 1588 1097 2355 66 0 26 chr2 141515928 141516231 -111740352 - AluY SINE Alu -16 295 1 2068 152 34 9 chr2 141516231 141516580 -111740003 - Tigger1 DNA MER2_type -2006 412 55 201 147 0 0 chr2 141516580 141516614 -111739969 + (A)n Simple_repeat Simple_repeat 1 34 0 1769 160 108 0 chr2 141516636 141516961 -111739622 - MER46B DNA MER2_type -1 235 1 1946 138 7 3 chr2 141517479 141517761 -111738822 - AluSx SINE Alu -29 283 1 1601 198 49 47 chr2 141517861 141518290 -111738293 - L1M4 LINE L1 -1158 4988 4559 966 171 146 34 chr2 141518290 141518647 -111737936 - Charlie1 DNA MER1_type -102 2659 3 445 273 88 11 chr2 141518649 141518834 -111737749 + MIR SINE MIR 12 206 -56 1675 245 107 7 chr2 141569001 141569618 -111686965 + L1M4 LINE L1 3566 4244 -1902 1139 233 59 5 chr2 141569625 141570016 -111686567 + L1M4 LINE L1 4282 4693 -1453 498 227 13 13 chr2 141570057 141570207 -111686376 + L1M4 LINE L1 4799 4948 -1198 536 254 106 0 chr2 141570354 141570543 -111686040 + MIR SINE MIR 28 236 -26 1597 143 45 36 chr2 141570581 141570889 -111685694 + AluSx SINE Alu 1 311 -1 50 31 0 0 chr2 141570918 141570982 -111685601 + AT_rich Low_complexity Low_complexity 1 64 0 1751 170 3 3 chr2 141571495 141571783 -111684800 + AluSx SINE Alu 1 288 -24 405 49 0 85 chr2 141572074 141572156 -111684427 - AluSp/q SINE Alu -4 309 235 712 166 28 28 chr2 141572277 141572310 -111684273 + MER21A LTR ERV1 787 819 -112 453 92 0 0 chr2 141572310 141572386 -111684197 + (CTTG)n Simple_repeat Simple_repeat 3 78 0 712 166 28 28 chr2 141572386 141572497 -111684086 + MER21A LTR ERV1 818 931 0 191 345 78 35 chr2 141572497 141572639 -111683944 - L2 LINE L2 -1372 1942 1795 986 188 41 66 chr2 141572817 141573136 -111683447 - L1MB8 LINE L1 -51 6127 5817 2238 74 7 3 chr2 141574752 141575062 -111681521 - AluSp SINE Alu 0 311 1 898 189 0 37 chr2 141575243 141575421 -111681162 + FRAM SINE Alu 1 165 -147 1856 126 10 36 chr2 141575421 141575722 -111680861 - AluSx SINE Alu -19 293 1 898 189 0 37 chr2 141575722 141575734 -111680849 + FRAM SINE Alu 165 176 0 210 208 208 13 chr2 141575741 141575818 -111680765 - L2 LINE L2 -1293 2021 1930 302 296 12 12 chr2 141576060 141576141 -111680442 + L2 LINE L2 3232 3312 -1 430 189 33 22 chr2 141576365 141576455 -111680128 - AluJb SINE Alu -82 230 140 1333 148 120 0 chr2 141576499 141576783 -111679800 - L1MD1 LINE L1 -20 6222 5905 11917 110 20 53 chr2 141577103 141580044 -111676539 + L1P3 LINE L1 1 2968 -3493 207 231 115 19 chr2 141580154 141580206 -111676377 - MIR SINE MIR -195 67 11 22 0 0 0 chr2 141580628 141580650 -111675933 + AT_rich Low_complexity Low_complexity 1 22 0 2071 120 41 0 chr2 141580690 141580982 -111675601 - AluSx SINE Alu -8 304 1 253 95 48 0 chr2 141581013 141581055 -111675528 - MER4E-int LTR ERV1 -6714 44 1 5185 74 19 3 chr2 141581055 141581795 -111674788 - MER4E LTR ERV1 0 766 15 2278 104 0 0 chr2 141581795 141582093 -111674490 + AluSx SINE Alu 1 298 -14 1490 186 133 6 chr2 141582486 141582825 -111673758 - MER58D DNA MER1_type -4 382 1 1972 120 20 0 chr2 141583211 141583503 -111673080 + AluSq SINE Alu 1 298 -15 2149 226 48 101 chr2 141583937 141584835 -111671748 + L1MEc LINE L1 36 885 -5511 767 253 154 17 chr2 141584904 141585379 -111671204 + L1MEc LINE L1 1085 1777 -4619 353 191 0 0 chr2 141585571 141585634 -111670949 - FLAM SINE Alu -29 104 42 470 368 36 16 chr2 141585702 141585955 -111670628 - MIR SINE MIR -3 259 2 1786 116 67 4 chr2 141586002 141586291 -111670292 + AluSq SINE Alu 1 306 0 4543 77 2 2 chr2 141586619 141587206 -111669377 + LTR14C LTR ERVK 1 587 0 1183 77 0 0 chr2 141587253 141587396 -111669187 + AluSq/x SINE Alu 1 143 -169 513 97 0 0 chr2 141587396 141587468 -111669115 + Alu SINE Alu 228 299 -10 183 342 213 10 chr2 141587519 141587721 -111668862 - L2 LINE L2 -469 2845 2603 623 267 119 58 chr2 141587742 141588087 -111668496 + L2 LINE L2 2275 2640 -674 980 233 61 1 chr2 141588298 141588527 -111668056 - MIR SINE MIR -23 239 1 22 56 0 0 chr2 141588749 141588785 -111667798 + AT_rich Low_complexity Low_complexity 1 36 0 2149 92 20 3 chr2 141588819 141589113 -111667470 - AluSp SINE Alu -10 303 5 422 273 70 67 chr2 141589291 141589591 -111666992 + L1MB2 LINE L1 4620 4920 -1226 28 61 0 0 chr2 141589647 141589696 -111666887 + AT_rich Low_complexity Low_complexity 1 49 0 343 275 119 23 chr2 141589697 141589915 -111666668 + L1MB2 LINE L1 5067 5305 -841 334 137 0 0 chr2 141590248 141590299 -111666284 + L1MB2 LINE L1 5621 5671 -500 2290 108 0 0 chr2 141590301 141590608 -111665975 + AluSq SINE Alu 1 307 -6 963 189 25 37 chr2 141590614 141590858 -111665725 + L1MB2 LINE L1 5836 6076 -95 227 264 0 0 chr2 141591283 141591336 -111665247 - MER58 DNA MER1_type -126 89 37 296 332 137 39 chr2 141591511 141591716 -111664867 - L3 LINE CR1 -120 1457 1233 1624 196 0 7 chr2 141591785 141592081 -111664502 + AluJb SINE Alu 5 298 -14 374 316 220 17 chr2 141592104 141592449 -111664134 + L3 LINE CR1 805 1219 -358 225 313 85 55 chr2 141592620 141592821 -111663762 - L3 LINE CR1 -1081 496 290 305 210 86 0 chr2 141593302 141593383 -111663200 - MER94 DNA DNA -45 89 2 2337 166 47 5 chr2 141594115 141594524 -111662059 - MSTB LTR MaLR 0 426 1 2133 120 10 3 chr2 141594658 141594966 -111661617 - AluSx SINE Alu -2 310 1 324 234 109 118 chr2 141595070 141595399 -111661184 - L1ME4a LINE L1 -3 6118 5793 242 208 114 87 chr2 141595464 141595613 -111660970 - L1ME4a LINE L1 -456 5665 5513 381 22 0 0 chr2 141595669 141595715 -111660868 + (TTA)n Simple_repeat Simple_repeat 1 46 0 629 269 0 0 chr2 141595717 141595836 -111660747 - FLAM_A SINE Alu -13 120 2 2070 53 147 0 chr2 141596132 141596432 -111660151 - LTR14A LTR ERVK 0 344 1 1364 124 15 0 chr2 141597135 141597337 -111659246 + AluSg/x SINE Alu 98 302 -10 26 30 0 0 chr2 141597945 141597978 -111658605 + AT_rich Low_complexity Low_complexity 1 33 0 1034 171 10 16 chr2 141598073 141598266 -111658317 - AluJo SINE Alu -1 311 120 2257 116 3 0 chr2 141598718 141599028 -111657555 + AluSx SINE Alu 1 311 -1 2239 117 0 0 chr2 141599517 141599815 -111656768 + AluSx SINE Alu 1 298 -14 727 206 67 18 chr2 141599830 141599995 -111656588 + FRAM SINE Alu 4 176 0 530 282 27 136 chr2 141600407 141600921 -111655662 + MER21B LTR ERV1 4 461 -402 326 133 17 0 chr2 141603752 141603812 -111652771 + L1MD3 LINE L1 7925 7985 -10 407 312 9 8 chr2 141604369 141604700 -111651883 + GA-rich Low_complexity Low_complexity 1 331 0 348 351 0 6 chr2 141604757 141604931 -111651652 + GA-rich Low_complexity Low_complexity 2 174 0 508 327 61 35 chr2 141605526 141605838 -111650745 + L2 LINE L2 2101 2420 -894 716 290 126 9 chr2 141605982 141606213 -111650370 + MIR SINE MIR 3 260 -2 419 293 23 8 chr2 141606232 141606365 -111650218 + L2 LINE L2 3146 3280 -33 2336 78 7 7 chr2 141606584 141606890 -111649693 - AluSx SINE Alu -6 306 1 21 0 0 0 chr2 141607065 141607086 -111649497 + AT_rich Low_complexity Low_complexity 1 21 0 408 239 68 90 chr2 141607303 141607625 -111648958 - L1ME2 LINE L1 -335 5829 5499 747 264 25 38 chr2 141609113 141609348 -111647235 + MIR SINE MIR 5 236 -26 341 294 67 47 chr2 141609515 141609770 -111646813 - L1ME2 LINE L1 -952 5194 4935 1727 185 3 7 chr2 141610343 141610641 -111645942 + AluJo SINE Alu 1 297 -15 752 169 15 0 chr2 141610707 141610837 -111645746 - FLAM_C SINE Alu 0 133 2 610 287 93 1 chr2 141611022 141611253 -111645330 - MIR SINE MIR -4 258 8 267 306 18 0 chr2 141611362 141611465 -111645118 + MIR3 SINE MIR 71 177 -31 216 0 0 0 chr2 141612269 141612293 -111644290 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1462 196 35 0 chr2 141612294 141612554 -111644029 - AluJo SINE Alu -43 269 1 198 0 0 0 chr2 141612557 141612579 -111644004 + (T)n Simple_repeat Simple_repeat 1 22 0 2053 128 0 27 chr2 141613586 141613882 -111642701 - AluSx SINE Alu -24 288 1 283 229 67 0 chr2 141613989 141614094 -111642489 - L1MC4 LINE L1 -1 8041 7930 21 36 0 0 chr2 141615416 141615444 -111641139 + GC_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr2 141616388 141616420 -111640163 + AT_rich Low_complexity Low_complexity 1 32 0 649 190 0 0 chr2 141617021 141617137 -111639446 + FLAM_A SINE Alu 19 134 -8 377 188 59 147 chr2 141617343 141617440 -111639143 + MIR SINE MIR 108 185 -77 2119 84 30 3 chr2 141617440 141617736 -111638847 + AluSp SINE Alu 1 304 -9 377 188 59 147 chr2 141617736 141617808 -111638775 + MIR SINE MIR 185 262 0 2090 110 4 0 chr2 141619059 141619385 -111637198 + AluSg SINE Alu 1 327 0 1351 203 13 43 chr2 141619982 141620287 -111636296 - AluJo SINE Alu -16 296 1 2008 140 3 16 chr2 141620583 141620890 -111635693 + MER1B DNA MER1_type 37 339 0 24 0 0 0 chr2 141621010 141621034 -111635549 + AT_rich Low_complexity Low_complexity 1 24 0 2234 120 3 3 chr2 141621118 141621426 -111635157 - AluSx SINE Alu -4 308 1 618 14 0 0 chr2 141621449 141621520 -111635063 + (TTTTA)n Simple_repeat Simple_repeat 3 73 0 986 137 0 0 chr2 141621521 141621660 -111634923 - AluSg/x SINE Alu -36 276 138 496 165 41 10 chr2 141621736 141621833 -111634750 + L1MD2 LINE L1 5729 5828 -531 965 180 25 30 chr2 141621834 141622034 -111634549 - Tigger3(Golem) DNA MER2_type -1 3028 2830 1684 183 3 0 chr2 141622136 141622426 -111634157 - AluSx SINE Alu -21 291 1 555 224 17 0 chr2 141622997 141623113 -111633470 - FLAM_A SINE Alu -15 118 1 1942 134 3 0 chr2 141624196 141624503 -111632080 - AluSx SINE Alu 0 308 1 1719 277 48 6 chr2 141624504 141624981 -111631602 - MLT1H1 LTR MaLR -58 497 1 2047 94 47 10 chr2 141625008 141625305 -111631278 + AluSc SINE Alu 1 308 -1 2104 135 0 0 chr2 141627949 141628246 -111628337 - AluSx SINE Alu -15 297 1 858 278 126 11 chr2 141628675 141629226 -111627357 + L1MC4a LINE L1 7154 7692 -116 235 260 73 0 chr2 141629254 141629350 -111627233 + L1MC4 LINE L1 7913 8015 -27 23 54 0 0 chr2 141629415 141629452 -111627131 + AT_rich Low_complexity Low_complexity 1 37 0 2122 91 7 11 chr2 141629948 141630233 -111626350 - AluSx SINE Alu -15 297 14 232 354 23 54 chr2 141631079 141631209 -111625374 + L2 LINE L2 2560 2685 -629 236 353 80 43 chr2 141631291 141631478 -111625105 - L2 LINE L2 -190 3082 2889 1646 151 39 18 chr2 141632035 141632319 -111624264 - AluJb SINE Alu -22 290 1 759 225 42 0 chr2 141632323 141632514 -111624069 - L1MD3 LINE L1 0 7995 7797 5877 211 111 57 chr2 141632532 141634432 -111622151 - L1MC4a LINE L1 -388 7420 5403 2310 82 0 3 chr2 141634432 141634723 -111621860 - AluSp SINE Alu -9 304 15 5877 211 111 57 chr2 141634723 141634838 -111621745 - L1MC4a LINE L1 -2405 5403 5296 234 0 0 0 chr2 141634850 141634876 -111621707 + (T)n Simple_repeat Simple_repeat 1 26 0 288 103 0 0 chr2 141634915 141634954 -111621629 + U2 snRNA snRNA 1 39 -149 1252 297 94 62 chr2 141634964 141635247 -111621336 - L1MC4a LINE L1 -887 5259 4986 2100 187 26 26 chr2 141635247 141635744 -111620839 - L1MB8 LINE L1 0 6178 5682 1252 297 94 62 chr2 141635744 141635903 -111620680 - L1MC4a LINE L1 -1160 4986 4833 1245 176 118 11 chr2 141635903 141636175 -111620408 - AluJb SINE Alu -11 301 1 1252 297 94 62 chr2 141636175 141636773 -111619810 - L1MC4a LINE L1 -1313 4833 4255 751 175 130 72 chr2 141636773 141636809 -111619774 - MER46A DNA MER2_type -2495 236 204 1759 113 8 12 chr2 141636809 141637066 -111619517 + AluSq SINE Alu 1 256 -57 751 175 130 72 chr2 141637066 141637252 -111619331 - MER46A DNA MER2_type -2527 204 1 1252 297 94 62 chr2 141637252 141638400 -111618183 - L1MC4a LINE L1 -1891 4255 3001 3675 174 69 32 chr2 141639118 141640003 -111616580 - L1MB8 LINE L1 -5 6173 5256 1739 140 10 48 chr2 141640038 141640361 -111616222 + AluSx SINE Alu 1 312 0 1763 175 3 0 chr2 141640378 141640664 -111615919 + AluJb SINE Alu 12 298 -14 2053 127 3 10 chr2 141640667 141640981 -111615602 + AluSx SINE Alu 1 312 0 416 244 34 0 chr2 141641016 141641135 -111615448 - L1MB8 LINE L1 -890 5256 5134 2208 108 7 0 chr2 141642503 141642800 -111613783 - AluSc SINE Alu -10 299 1 2245 84 0 7 chr2 141643547 141643858 -111612725 + AluSg SINE Alu 1 309 0 1899 144 7 26 chr2 141645272 141645578 -111611005 + AluJb SINE Alu 1 300 -12 21 0 0 0 chr2 141645613 141645634 -111610949 + AT_rich Low_complexity Low_complexity 1 21 0 1415 176 54 34 chr2 141646345 141646641 -111609942 + AluJo SINE Alu 1 302 0 1466 165 85 7 chr2 141646653 141646925 -111609658 + AluJb SINE Alu 1 293 -19 182 200 13 120 chr2 141646926 141647001 -111609582 + MIR SINE MIR 196 262 0 1707 198 135 72 chr2 141648552 141649048 -111607535 - MLT1E3 LTR MaLR 0 624 84 2061 137 3 0 chr2 141649048 141649348 -111607235 + AluSx SINE Alu 1 301 -11 1707 198 135 72 chr2 141649348 141649438 -111607145 - MLT1E3 LTR MaLR -540 84 1 485 283 44 0 chr2 141649537 141649650 -111606933 + L2 LINE L2 3150 3267 -5 237 275 137 38 chr2 141649981 141650112 -111606471 - MIR SINE MIR -71 191 48 26 39 0 20 chr2 141652520 141652554 -111604029 + AT_rich Low_complexity Low_complexity 1 35 -15 2394 58 0 14 chr2 141652554 141652848 -111603735 + AluY SINE Alu 1 290 -21 26 39 0 20 chr2 141652848 141652864 -111603719 + AT_rich Low_complexity Low_complexity 35 50 0 2298 84 10 3 chr2 141653677 141653974 -111602609 - AluSq SINE Alu -14 299 1 189 0 0 0 chr2 141653976 141653997 -111602586 + (T)n Simple_repeat Simple_repeat 1 21 0 2171 115 0 7 chr2 141654249 141654553 -111602030 + AluSq SINE Alu 1 302 -11 22 0 0 0 chr2 141657137 141657159 -111599424 + AT_rich Low_complexity Low_complexity 1 22 0 350 353 58 66 chr2 141659220 141659600 -111596983 - L2 LINE L2 -20 3252 2876 2444 73 3 0 chr2 141659626 141659929 -111596654 + AluY SINE Alu 1 304 -7 181 378 50 17 chr2 141660196 141660315 -111596268 - L2 LINE L2 -572 2742 2620 768 176 28 7 chr2 141660437 141660579 -111596004 + AluJb SINE Alu 117 261 -51 1954 143 18 0 chr2 141660680 141660966 -111595617 + AluSq SINE Alu 1 291 -22 785 229 110 9 chr2 141661017 141661235 -111595348 + MER21B LTR ERV1 1 240 -623 1976 85 14 11 chr2 141661445 141661751 -111594832 + AluSx SINE Alu 1 307 0 522 355 100 29 chr2 141662026 141662485 -111594098 - L2 LINE L2 -342 2972 2465 1790 76 4 8 chr2 141662485 141662721 -111593862 + AluSp SINE Alu 78 312 -1 522 355 100 29 chr2 141662721 141662819 -111593764 - L2 LINE L2 -849 2465 2375 22 70 0 0 chr2 141662915 141662958 -111593625 + AT_rich Low_complexity Low_complexity 1 43 0 260 330 38 9 chr2 141663110 141663216 -111593367 + MIR3 SINE MIR 89 197 -11 382 244 0 0 chr2 141663844 141663930 -111592653 + L1MC5 LINE L1 7822 7907 -54 23 0 0 0 chr2 141664736 141664759 -111591824 + AT_rich Low_complexity Low_complexity 1 23 0 2016 134 0 10 chr2 141666772 141667064 -111589519 + AluSx SINE Alu 1 289 -23 212 336 37 19 chr2 141667749 141667856 -111588727 + MIR SINE MIR 23 131 -131 738 216 42 32 chr2 141667892 141668082 -111588501 - MIR SINE MIR -42 220 29 247 229 66 0 chr2 141668104 141668165 -111588418 + MIR SINE MIR 128 192 -70 189 0 0 0 chr2 141668278 141668299 -111588284 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 692 231 51 64 chr2 141669271 141669505 -111587078 - MIR SINE MIR -9 253 23 248 343 34 79 chr2 141669690 141669786 -111586797 - L2 LINE L2 -292 2980 2894 1733 155 36 4 chr2 141669786 141670063 -111586520 + AluJb SINE Alu 1 286 -26 248 343 34 79 chr2 141670063 141670144 -111586439 - L2 LINE L2 -378 2894 2811 893 201 5 43 chr2 141670237 141670421 -111586162 - MER58A DNA MER1_type -4 220 44 248 362 148 20 chr2 141670476 141670625 -111585958 - L2 LINE L2 -584 2730 2563 206 211 322 0 chr2 141670624 141670714 -111585869 + L2 LINE L2 3194 3312 -1 * 2242 111 3 7 chr2 141672231 141672538 -111584045 + AluSx SINE Alu 3 308 -4 333 162 73 0 chr2 141673106 141673174 -111583409 - MER46C DNA MER2_type -162 176 104 2457 67 0 0 chr2 141674090 141674387 -111582196 - AluY SINE Alu -14 297 1 1614 137 13 54 chr2 141674521 141674836 -111581747 + AluSx SINE Alu 4 305 -7 252 264 35 58 chr2 141675202 141675289 -111581294 - L2 LINE L2 -18 3295 3211 192 272 170 34 chr2 141675734 141675881 -111580702 - MIR SINE MIR 0 262 96 1486 173 18 7 chr2 141675895 141676167 -111580416 + AluJb SINE Alu 11 285 -27 326 250 250 0 chr2 141678239 141678371 -111578212 - MIR SINE MIR 0 262 98 2886 92 49 2 chr2 141679569 141679980 -111576603 + L1PA13 LINE L1 5715 6144 -19 2113 96 7 23 chr2 141680106 141680407 -111576176 + AluSx SINE Alu 1 296 -16 270 250 16 0 chr2 141680622 141680686 -111575897 - MER46C DNA MER2_type -1 337 273 1329 224 0 0 chr2 141680720 141680966 -111575617 + AluSx SINE Alu 36 281 -31 2152 92 20 7 chr2 141681542 141681834 -111574749 + AluSx SINE Alu 1 296 -16 203 290 161 0 chr2 141683523 141683616 -111572967 + MIR SINE MIR 37 144 -118 189 196 0 0 chr2 141683946 141683992 -111572591 + (TG)n Simple_repeat Simple_repeat 2 47 0 2263 41 4 4 chr2 141684044 141684314 -111572269 - AluY SINE Alu -14 297 28 35 0 0 0 chr2 141686492 141686527 -111570056 + AT_rich Low_complexity Low_complexity 1 35 0 251 203 0 0 chr2 141686850 141686909 -111569674 + (CCA)n Simple_repeat Simple_repeat 2 60 0 614 124 0 62 chr2 141687324 141687437 -111569146 + FLAM_C SINE Alu 3 108 -35 2080 245 146 13 chr2 141687437 141688050 -111568533 - L1MEc LINE L1 -2304 3911 3381 2046 142 0 0 chr2 141688050 141688345 -111568238 + AluSx SINE Alu 1 295 -17 2080 245 146 13 chr2 141688345 141688686 -111567897 - L1MEc LINE L1 -2834 3381 2830 1013 113 7 0 chr2 141688716 141688857 -111567726 + AluSg/x SINE Alu 92 233 -77 1973 184 24 65 chr2 141688937 141689272 -111567311 - L1MB5 LINE L1 -15 6228 5881 219 36 0 0 chr2 141689272 141689300 -111567283 + (CA)n Simple_repeat Simple_repeat 1 28 0 1973 184 24 65 chr2 141689300 141689397 -111567186 - L1MB5 LINE L1 -362 5881 5820 2227 91 7 0 chr2 141689397 141689725 -111566858 - AluSx SINE Alu 0 312 1 1973 184 24 65 chr2 141689725 141689829 -111566754 - L1MB5 LINE L1 -423 5820 5713 363 23 0 0 chr2 141689840 141689884 -111566699 + (TG)n Simple_repeat Simple_repeat 2 45 0 2701 223 58 15 chr2 141689884 141690442 -111566141 - L1MB5 LINE L1 -845 5370 4767 2367 52 41 0 chr2 141690442 141690770 -111565813 - AluY SINE Alu 0 311 1 2701 223 58 15 chr2 141690770 141690999 -111565584 - L1MB5 LINE L1 -1448 4767 4549 525 212 175 46 chr2 141691015 141691420 -111565163 - L1MB5 LINE L1 -3620 2595 2172 597 77 0 0 chr2 141691456 141691534 -111565049 - U6 snRNA snRNA -3 104 27 481 254 35 25 chr2 141691575 141691776 -111564807 - L1MEc LINE L1 -4328 2068 1866 2004 105 14 27 chr2 141691788 141692083 -111564500 + AluSx SINE Alu 1 291 -21 2202 111 0 26 chr2 141692097 141692403 -111564180 + AluSx SINE Alu 1 298 -14 1071 107 20 0 chr2 141692822 141692972 -111563611 + AluSg/x SINE Alu 106 258 -54 1762 160 11 28 chr2 141693913 141694200 -111562383 + AluJb SINE Alu 1 282 -30 486 49 0 0 chr2 141694218 141694279 -111562304 + (CA)n Simple_repeat Simple_repeat 1 61 0 378 258 58 45 chr2 141694747 141694902 -111561681 - MIR SINE MIR 0 262 106 870 246 78 0 chr2 141694976 141695167 -111561416 - MER3 DNA MER1_type -1 208 3 356 286 125 0 chr2 141695556 141695668 -111560915 + MLT1K LTR MaLR 128 253 -335 2448 71 0 0 chr2 141696512 141696808 -111559775 + AluY SINE Alu 1 296 -15 2990 173 39 83 chr2 141696929 141697312 -111559271 - L1MB8 LINE L1 -11 6167 5837 1569 194 40 0 chr2 141697312 141697585 -111558998 - AluJb SINE Alu -28 284 1 2990 173 39 83 chr2 141697585 141698004 -111558579 - L1MB8 LINE L1 -341 5837 5401 2327 90 10 3 chr2 141698010 141698310 -111558273 - AluSc SINE Alu -7 302 1 950 171 66 113 chr2 141698415 141698689 -111557894 - MLT1B LTR MaLR 0 390 130 3407 156 34 6 chr2 141698689 141699331 -111557252 + L1MB7 LINE L1 5525 6184 0 2159 89 7 0 chr2 141699340 141699650 -111556933 + AluSx SINE Alu 1 312 0 1647 179 31 7 chr2 141700160 141700450 -111556133 + AluJo SINE Alu 1 297 -15 2051 128 0 0 chr2 141700834 141701116 -111555467 + AluSx SINE Alu 1 282 -30 904 218 60 4 chr2 141703426 141703674 -111552909 - L1MB5 LINE L1 -3 6171 5910 319 206 16 0 chr2 141703675 141703738 -111552845 + AluJo/FLAM SINE Alu 50 113 -189 2352 97 0 19 chr2 141703738 141704057 -111552526 - AluSq SINE Alu 0 313 1 1178 217 79 47 chr2 141704465 141704898 -111551685 + L1ME2 LINE L1 5692 6141 -23 642 282 69 52 chr2 141705121 141705259 -111551324 + HAL1 LINE L1 1487 1621 -886 2451 81 3 3 chr2 141705259 141705567 -111551016 + AluSc SINE Alu 1 308 -1 642 282 69 52 chr2 141705567 141705733 -111550850 + HAL1 LINE L1 1621 1796 -711 21 0 0 0 chr2 141706107 141706128 -111550455 + AT_rich Low_complexity Low_complexity 1 21 0 1918 122 0 0 chr2 141706358 141706613 -111549970 + AluSx SINE Alu 1 255 -57 877 300 121 19 chr2 141707763 141708126 -111548457 + L2 LINE L2 2911 3310 -3 1811 141 0 30 chr2 141708357 141708656 -111547927 - AluSx SINE Alu -22 290 1 544 191 99 19 chr2 141708876 141709038 -111547545 + MER110 LTR ERV1 317 491 0 460 283 130 8 chr2 141709189 141709405 -111547178 - MIR SINE MIR -13 249 12 829 171 151 26 chr2 141709407 141709748 -111546835 + Charlie1 DNA MER1_type 3 2645 -116 1475 204 47 45 chr2 141709748 141710193 -111546390 + L1M4 LINE L1 4543 4988 -1158 1952 138 7 3 chr2 141710293 141710575 -111546008 + AluSx SINE Alu 1 283 -29 1610 160 108 0 chr2 141711093 141711418 -111545165 + MER46B DNA MER2_type 1 235 -1 201 147 0 0 chr2 141711440 141711474 -111545109 + (T)n Simple_repeat Simple_repeat 1 34 0 1907 150 35 9 chr2 141711474 141711821 -111544762 + Tigger1 DNA MER2_type 55 410 -2008 2342 66 0 26 chr2 141711823 141712126 -111544457 + AluY SINE Alu 1 295 -16 2728 123 23 36 chr2 141712126 141712617 -111543966 + Tigger1 DNA MER2_type 1097 1582 -836 1231 194 116 12 chr2 141712617 141712733 -111543850 + AluJo SINE Alu 5 107 -195 207 0 0 0 chr2 141712733 141712756 -111543827 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1231 194 116 12 chr2 141712756 141712897 -111543686 + AluJo SINE Alu 107 289 -13 2728 123 23 36 chr2 141712897 141712933 -111543650 + Tigger1 DNA MER2_type 1582 1617 -801 3651 135 67 61 chr2 141712979 141713787 -111542796 + Tigger1 DNA MER2_type 1606 2418 0 4481 157 78 30 chr2 141713825 141714382 -111542201 + Tigger3b DNA MER2_type 1 530 -2498 237 33 0 0 chr2 141714382 141714412 -111542171 + (CAA)n Simple_repeat Simple_repeat 2 31 0 2240 91 0 20 chr2 141714417 141714715 -111541868 + AluSq SINE Alu 1 292 -21 4481 157 78 30 chr2 141714715 141715170 -111541413 + Tigger3b DNA MER2_type 533 1067 -164 2834 143 91 72 chr2 141715347 141715722 -111540861 - Tigger3b DNA MER2_type -2308 720 353 351 0 0 0 chr2 141715722 141715761 -111540822 + (TG)n Simple_repeat Simple_repeat 2 40 0 2834 143 91 72 chr2 141715761 141715775 -111540808 - Tigger3b DNA MER2_type -2675 353 341 1979 149 3 3 chr2 141715775 141716070 -111540513 - AluJb SINE Alu -17 295 1 2834 143 91 72 chr2 141716070 141716111 -111540472 - Tigger3b DNA MER2_type -2687 341 302 1665 177 7 10 chr2 141716111 141716410 -111540173 - AluJo SINE Alu -14 298 1 2834 143 91 72 chr2 141716410 141716684 -111539899 - Tigger3b DNA MER2_type -2726 302 1 316 276 97 35 chr2 141716690 141716835 -111539748 + L1ME2 LINE L1 5718 5871 -293 1457 129 51 90 chr2 141716868 141717224 -111539359 - MER46B DNA MER2_type -3 233 17 2288 116 0 10 chr2 141717238 141717549 -111539034 + AluSx SINE Alu 3 310 -2 189 0 0 0 chr2 141719807 141719828 -111536755 + (A)n Simple_repeat Simple_repeat 1 21 0 2248 82 7 23 chr2 141720417 141720722 -111535861 + AluSx SINE Alu 1 300 -12 205 379 81 17 chr2 141721512 141721686 -111534897 + MIR3 SINE MIR 20 204 -4 285 163 0 0 chr2 141725727 141725776 -111530807 - Alu SINE Alu -14 288 240 815 254 43 5 chr2 141726282 141726491 -111530092 + MIR SINE MIR 20 236 -26 1850 144 29 29 chr2 141726529 141726841 -111529742 + AluSx SINE Alu 1 312 0 50 31 0 0 chr2 141726872 141726936 -111529647 + AT_rich Low_complexity Low_complexity 1 64 0 1776 167 3 3 chr2 141727449 141727737 -111528846 + AluSx SINE Alu 1 288 -24 1536 91 5 27 chr2 141728028 141728249 -111528334 - AluSq SINE Alu -4 309 94 2151 129 0 0 chr2 141728576 141728870 -111527713 + AluSx SINE Alu 1 294 -18 243 103 0 0 chr2 141729609 141729648 -111526935 + (TG)n Simple_repeat Simple_repeat 1 39 0 2004 133 13 3 chr2 141729706 141730006 -111526577 + AluSx SINE Alu 1 303 -9 443 232 0 11 chr2 141730047 141730142 -111526441 + FRAM SINE Alu 1 92 -84 214 149 0 43 chr2 141730685 141730732 -111525851 + (TTTTTG)n Simple_repeat Simple_repeat 4 48 0 345 130 0 14 chr2 141730746 141730815 -111525768 - Alu SINE Alu -1 301 234 630 166 0 65 chr2 141730815 141730954 -111525629 - AluJb SINE Alu -182 130 1 460 217 114 97 chr2 141731720 141731895 -111524688 + MER45A DNA AcHobo 1 178 0 1787 157 38 0 chr2 141732928 141733215 -111523368 + AluSx SINE Alu 1 298 -14 1972 162 0 0 chr2 141733413 141733709 -111522874 + AluSx SINE Alu 1 296 -16 204 135 0 0 chr2 141734811 141734848 -111521735 + (TC)n Simple_repeat Simple_repeat 1 37 0 2163 122 3 0 chr2 141734853 141735148 -111521435 - AluSx SINE Alu -16 296 1 286 234 65 104 chr2 141735193 141735347 -111521236 + MIR SINE MIR 13 160 -102 941 108 0 8 chr2 141735350 141735479 -111521104 + AluSq/x SINE Alu 1 128 -184 308 235 12 35 chr2 141735486 141735571 -111521012 + MIR SINE MIR 170 252 -10 2155 123 7 0 chr2 141735642 141735943 -111520640 - AluSx SINE Alu -9 303 1 276 30 0 0 chr2 141735947 141735980 -111520603 + (T)n Simple_repeat Simple_repeat 1 33 0 183 313 121 62 chr2 141736188 141736412 -111520171 - MIR SINE MIR -24 238 2 2246 119 0 0 chr2 141736683 141736976 -111519607 + AluSx SINE Alu 2 294 -18 2067 134 0 0 chr2 141737372 141737663 -111518920 + AluSq SINE Alu 1 291 -22 763 187 13 13 chr2 141738122 141738272 -111518311 - LTR31 LTR ERV1 -16 603 454 1352 190 19 85 chr2 141738386 141738750 -111517833 - LTR31 LTR ERV1 -176 443 104 2323 97 0 0 chr2 141739603 141739901 -111516682 + AluSx SINE Alu 5 302 -10 2299 110 0 0 chr2 141740156 141740455 -111516128 + AluSx SINE Alu 1 299 -13 408 20 0 0 chr2 141740835 141740884 -111515699 + (CATA)n Simple_repeat Simple_repeat 1 49 0 234 293 0 0 chr2 141740887 141740945 -111515638 + L2 LINE L2 3251 3308 -5 2291 71 4 0 chr2 141740949 141741271 -111515312 - AluY SINE Alu 0 323 1 1766 164 22 22 chr2 141741633 141741945 -111514638 - AluJo SINE Alu 0 312 1 309 275 239 9 chr2 141742652 141742761 -111513822 + MIR SINE MIR 15 148 -114 4461 143 46 30 chr2 141742819 141743348 -111513235 + L1MB1 LINE L1 5226 5745 -423 1532 208 0 11 chr2 141743348 141743632 -111512951 + AluJo SINE Alu 13 293 -19 4461 143 46 30 chr2 141743632 141743799 -111512784 + L1MB1 LINE L1 5745 5908 -260 1955 141 17 3 chr2 141743799 141744096 -111512487 + AluSx SINE Alu 1 301 -11 4461 143 46 30 chr2 141744096 141744297 -111512286 + L1MB1 LINE L1 5908 6144 -24 1347 226 154 5 chr2 141744804 141745193 -111511390 - MER82 DNA MER2_type -6 647 201 2017 128 3 0 chr2 141745537 141745827 -111510756 + AluSx SINE Alu 1 291 -21 358 250 9 60 chr2 141745934 141746050 -111510533 - MER5B DNA MER1_type -68 110 1 567 179 67 0 chr2 141747262 141747396 -111509187 + L1MB1 LINE L1 6026 6168 0 183 114 0 0 chr2 141747596 141747631 -111508952 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 330 223 81 47 chr2 141747994 141748142 -111508441 - L1ME4a LINE L1 -23 6098 5946 1812 138 62 0 chr2 141748218 141748494 -111508089 + AluJo SINE Alu 1 293 -19 1052 164 6 0 chr2 141748532 141748697 -111507886 + AluSq SINE Alu 136 301 -12 1954 127 19 10 chr2 141748788 141749096 -111507487 - AluSx SINE Alu -1 311 1 2087 110 28 0 chr2 141749204 141749494 -111507089 + AluSx SINE Alu 1 298 -14 1490 186 133 6 chr2 141749887 141750226 -111506357 - MER58D DNA MER1_type -4 382 1 1950 123 20 0 chr2 141750612 141750904 -111505679 + AluSq SINE Alu 1 298 -15 2182 224 48 101 chr2 141751338 141752236 -111504347 + L1MEc LINE L1 36 885 -5511 807 252 152 17 chr2 141752305 141752781 -111503802 + L1MEc LINE L1 1085 1777 -4619 915 189 142 71 chr2 141752955 141753363 -111503220 + L1ME1 LINE L1 5726 6162 -4 1715 183 10 0 chr2 141753387 141753676 -111502907 - AluJo SINE Alu -20 292 1 538 159 0 11 chr2 141753986 141754074 -111502509 + AluSg/x SINE Alu 82 168 -142 226 208 0 0 chr2 141754169 141754217 -111502366 + MER58 DNA MER1_type 56 103 -112 244 231 31 0 chr2 141754237 141754302 -111502281 + MER58 DNA MER1_type 2354 2420 0 536 277 71 15 chr2 141754333 141754600 -111501983 + L1ME3A LINE L1 5681 5962 -208 2076 150 3 0 chr2 141754657 141754957 -111501626 + AluSx SINE Alu 1 301 -11 2491 77 0 0 chr2 141755034 141755344 -111501239 - AluY SINE Alu -1 310 1 2284 120 85 12 chr2 141755462 141755861 -111500722 - MSTA LTR MaLR 0 428 1 892 8 0 39 chr2 141755866 141755996 -111500587 + (TAGA)n Simple_repeat Simple_repeat 2 126 0 1059 282 85 24 chr2 141756075 141756486 -111500097 - L2 LINE L2 -1485 1829 1394 3526 147 79 66 chr2 141757755 141757988 -111498595 - MER44D DNA MER2_type -1882 705 476 1485 181 13 59 chr2 141757988 141758291 -111498292 + AluJo SINE Alu 1 289 -23 3526 147 79 66 chr2 141758291 141758753 -111497830 - MER44D DNA MER2_type -2111 476 1 809 166 26 13 chr2 141758797 141758948 -111497635 - L1MB8 LINE L1 0 6178 6026 412 123 62 0 chr2 141758948 141759013 -111497570 + L1M3 LINE L1 5728 5796 -375 792 124 9 0 chr2 141759013 141759126 -111497457 + FRAM SINE Alu 62 175 -1 1821 123 31 20 chr2 141759126 141759264 -111497319 + AluSx SINE Alu 1 136 -176 2229 76 41 7 chr2 141759264 141759555 -111497028 + AluY SINE Alu 1 301 -10 1821 123 31 20 chr2 141759555 141759709 -111496874 + AluSx SINE Alu 136 296 -16 2151 110 4 0 chr2 141760855 141761163 -111495420 - AluSx SINE Alu 0 309 1 1897 128 57 0 chr2 141761361 141761642 -111494941 - AluSx SINE Alu -15 297 1 521 244 251 7 chr2 141761661 141761940 -111494643 - L1ME4a LINE L1 -199 5922 5576 839 177 13 19 chr2 141762385 141762543 -111494040 + FRAM SINE Alu 11 167 -9 2544 60 0 0 chr2 141762731 141763030 -111493553 + AluY SINE Alu 1 299 -12 203 176 0 73 chr2 141763210 141763263 -111493320 + T-rich Low_complexity Low_complexity 6 55 -13 6189 26 1 1 chr2 141763263 141763945 -111492638 - SVA Other Other -3 1383 702 203 176 0 73 chr2 141763945 141763959 -111492624 + T-rich Low_complexity Low_complexity 55 68 0 647 198 114 40 chr2 141764892 141765165 -111491418 - L1MC5 LINE L1 -60 7901 7609 462 163 92 0 chr2 141765197 141765295 -111491288 - L1MC5 LINE L1 -515 7446 7340 2033 146 3 0 chr2 141765560 141765861 -111490722 + AluSx SINE Alu 1 302 -10 2273 62 4 0 chr2 141765981 141766254 -111490329 - AluY SINE Alu -37 274 1 1652 122 30 104 chr2 141767225 141767561 -111489022 + AluSp SINE Alu 1 311 -2 557 239 156 23 chr2 141767652 141768246 -111488337 + L1MC5 LINE L1 7037 7566 -395 1657 158 34 17 chr2 141768268 141768560 -111488023 + AluJo SINE Alu 1 297 -15 2379 97 0 7 chr2 141768561 141768871 -111487712 + AluSx SINE Alu 3 310 -2 238 210 161 0 chr2 141768899 141768961 -111487622 + L1MC5 LINE L1 7723 7794 -167 399 137 0 27 chr2 141768975 141769048 -111487535 + L1MC5 LINE L1 7841 7911 -50 500 211 11 0 chr2 141769062 141769157 -111487426 - AluJb SINE Alu -16 296 201 1463 194 7 34 chr2 141769160 141769454 -111487129 - AluJo SINE Alu -26 286 1 267 154 0 0 chr2 141769481 141769520 -111487063 + AluJb SINE Alu 1 39 -262 2595 65 0 0 chr2 141769522 141769830 -111486753 + AluY SINE Alu 1 308 -3 1706 182 0 0 chr2 141769830 141770097 -111486486 + AluJb SINE Alu 27 295 -17 302 281 121 68 chr2 141770169 141770478 -111486105 + L1MC/D LINE L1 5441 5766 -404 4143 196 94 37 chr2 141770554 141771647 -111484936 + L1MC4 LINE L1 6781 7949 -93 243 0 0 0 chr2 141771647 141771674 -111484909 + (CA)n Simple_repeat Simple_repeat 2 28 0 4143 196 94 37 chr2 141771674 141771773 -111484810 + L1MC4 LINE L1 7949 8041 -1 2224 86 0 71 chr2 141771950 141772276 -111484307 + AluY SINE Alu 1 303 -8 1536 164 98 4 chr2 141772927 141773202 -111483381 + AluJo SINE Alu 1 301 -11 293 307 171 7 chr2 141773216 141773356 -111483227 - L2 LINE L2 -4 3268 3106 451 202 150 29 chr2 141773361 141773534 -111483049 + L1ME LINE L1 5629 5822 -299 2084 114 0 0 chr2 141773554 141773867 -111482716 + AluSg SINE Alu 1 313 0 683 214 77 0 chr2 141773905 141774073 -111482510 + L1ME4a LINE L1 5325 5505 -661 2246 120 0 0 chr2 141774085 141774384 -111482199 + AluSq SINE Alu 2 300 -13 1061 112 112 0 chr2 141774384 141774554 -111482029 + L1PA15 LINE L1 5912 6100 -65 393 226 51 62 chr2 141774580 141775361 -111481222 + L1ME4a LINE L1 5495 6079 -85 1692 192 7 3 chr2 141775361 141775663 -111480920 - AluJb SINE Alu -8 304 2 393 226 51 62 chr2 141775663 141775748 -111480835 + L1ME4a LINE L1 6079 6163 -1 2114 103 7 14 chr2 141775748 141776038 -111480545 + AluSg SINE Alu 1 288 -22 198 0 0 0 chr2 141776042 141776064 -111480519 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 1256 110 0 12 chr2 141776206 141776379 -111480204 + AluSg/x SINE Alu 129 299 -13 260 198 110 88 chr2 141776383 141776474 -111480109 + L1MC5 LINE L1 7706 7798 -163 266 169 141 28 chr2 141776476 141776547 -111480036 + L1MC5 LINE L1 7833 7911 -50 2350 85 7 3 chr2 141776719 141777025 -111479558 - AluSg SINE Alu -3 307 1 1696 164 35 14 chr2 141778084 141778371 -111478212 + AluJo SINE Alu 1 293 -19 2151 141 0 0 chr2 141778458 141778770 -111477813 - AluSx SINE Alu 0 312 1 21 0 0 0 chr2 141778776 141778797 -111477786 + AT_rich Low_complexity Low_complexity 1 21 0 2196 102 33 3 chr2 141779991 141780295 -111476288 - AluSq SINE Alu 0 313 1 180 0 0 0 chr2 141780841 141780861 -111475722 + (T)n Simple_repeat Simple_repeat 1 20 0 2280 88 0 0 chr2 141781108 141781419 -111475164 + AluY SINE Alu 1 311 0 660 151 33 99 chr2 141781420 141781572 -111475011 - PRIMA41-int LTR ERV1 -1074 6682 6541 2230 114 0 16 chr2 141781775 141782091 -111474492 + AluSx SINE Alu 1 311 -1 1491 108 5 9 chr2 141784411 141784623 -111471960 + AluSc SINE Alu 83 293 -16 497 136 37 12 chr2 141784651 141784732 -111471851 - AluSg/x SINE Alu -13 296 214 2303 97 13 3 chr2 141784870 141785178 -111471405 - AluSq SINE Alu -2 311 1 253 168 84 93 chr2 141785400 141785507 -111471076 - MER102b DNA MER1_type 0 341 236 213 378 18 73 chr2 141786261 141786425 -111470158 + L2 LINE L2 3113 3267 -5 1992 113 17 14 chr2 141786431 141786722 -111469861 + AluSx SINE Alu 1 292 -20 2114 91 3 25 chr2 141786965 141787280 -111469303 - AluSg SINE Alu 0 309 1 1948 131 24 3 chr2 141787838 141788136 -111468447 - AluSx SINE Alu -8 304 1 2153 109 0 0 chr2 141788242 141788548 -111468035 - AluSx SINE Alu 0 306 1 31 26 0 0 chr2 141788551 141788589 -111467994 + AT_rich Low_complexity Low_complexity 1 38 0 2198 112 3 0 chr2 141788589 141788875 -111467708 - AluSq SINE Alu -26 287 1 1732 141 4 0 chr2 141789002 141789305 -111467278 - AluSx SINE Alu 0 338 35 700 274 114 35 chr2 141789321 141789723 -111466860 + L2 LINE L2 1009 1442 -1872 922 133 0 7 chr2 141789798 141789928 -111466655 + AluJo SINE Alu 1 130 -178 190 0 67 0 chr2 141789928 141789958 -111466625 + (CAA)n Simple_repeat Simple_repeat 2 33 0 752 277 100 41 chr2 141790051 141790326 -111466257 - MLT1L LTR MaLR -8 607 307 1554 158 29 82 chr2 141790326 141790642 -111465941 - AluJo SINE Alu -9 303 5 752 277 100 41 chr2 141790642 141790705 -111465878 - MLT1L LTR MaLR -308 307 249 2218 117 0 0 chr2 141790777 141791077 -111465506 - AluSx SINE Alu -11 301 2 1136 285 90 49 chr2 141791239 141791973 -111464610 + L2 LINE L2 1647 2410 -904 906 145 0 93 chr2 141792026 141792198 -111464385 - FRAM SINE Alu -20 156 1 529 336 138 36 chr2 141792209 141792426 -111464157 + L2 LINE L2 2461 2655 -617 2188 121 0 0 chr2 141792426 141792724 -111463859 - AluSg SINE Alu -12 298 1 529 336 138 36 chr2 141792724 141793234 -111463349 + L2 LINE L2 2655 3268 -4 305 282 77 26 chr2 141796141 141796297 -111460286 - MIR SINE MIR -15 247 84 339 298 120 31 chr2 141797785 141797976 -111458607 + L2 LINE L2 2275 2482 -832 457 276 179 44 chr2 141798016 141798335 -111458248 + L2 LINE L2 2932 3293 -20 2127 95 60 0 chr2 141798626 141798909 -111457674 - AluSc SINE Alu -9 300 1 1455 233 166 44 chr2 141799045 141799884 -111456699 - L2 LINE L2 0 3313 2394 1704 91 0 9 chr2 141799902 141800123 -111456460 + AluSq SINE Alu 89 307 -6 445 159 227 0 chr2 141800123 141800211 -111456372 - L1ME3 LINE L1 -109 6053 5946 1842 140 56 0 chr2 141800385 141800671 -111455912 - AluSx SINE Alu -10 302 1 32 0 0 0 chr2 141801131 141801163 -111455420 + AT_rich Low_complexity Low_complexity 1 32 0 1670 134 30 11 chr2 141801226 141801494 -111455089 + AluJo SINE Alu 29 301 -11 1967 127 7 39 chr2 141801498 141801806 -111454777 + AluJb SINE Alu 1 298 -14 1448 234 75 84 chr2 141802183 141802893 -111453690 - L1MC5 LINE L1 -51 7910 7206 679 256 0 0 chr2 141802893 141803022 -111453561 - FLAM_A SINE Alu -3 130 2 1448 234 75 84 chr2 141803022 141803060 -111453523 - L1MC5 LINE L1 -755 7206 7169 1119 71 0 0 chr2 141803143 141803284 -111453299 + AluY SINE Alu 169 309 -2 2491 32 39 32 chr2 141803594 141803903 -111452680 - AluY SINE Alu 0 311 1 2342 91 0 7 chr2 141803931 141804238 -111452345 - AluY SINE Alu -6 305 1 361 257 96 15 chr2 141804436 141804572 -111452011 + L1ME4a LINE L1 5959 6105 -16 2146 127 0 3 chr2 141804797 141805097 -111451486 - AluSg SINE Alu -11 299 1 935 107 15 0 chr2 141805097 141805228 -111451355 - AluSg SINE Alu -177 133 1 2113 123 3 0 chr2 141805476 141805768 -111450815 - AluSg SINE Alu -17 293 1 2475 95 0 0 chr2 141805768 141806074 -111450509 - AluSq SINE Alu -7 306 1 2315 86 0 3 chr2 141807079 141807369 -111449214 - AluSx SINE Alu -19 293 5 2166 120 17 0 chr2 141807534 141807834 -111448749 - AluSx SINE Alu -7 305 1 38 0 0 0 chr2 141808490 141808528 -111448055 + AT_rich Low_complexity Low_complexity 1 38 0 814 248 130 8 chr2 141809049 141809295 -111447288 - L3 LINE CR1 -72 1505 1230 1313 211 112 91 chr2 141809398 141810527 -111446056 - L1ME LINE L1 -4439 1641 452 24 0 0 0 chr2 141810527 141810551 -111446032 + AT_rich Low_complexity Low_complexity 1 24 0 778 195 0 0 chr2 141810552 141810675 -111445908 + FLAM_C SINE Alu 2 124 -19 1554 154 11 33 chr2 141810683 141810826 -111445757 - AluJo SINE Alu -34 278 142 2305 111 3 0 chr2 141810826 141811124 -111445459 - AluSp SINE Alu -14 299 1 1554 154 11 33 chr2 141811124 141811252 -111445331 - AluJo SINE Alu -170 142 13 436 220 209 28 chr2 141811286 141811468 -111445115 - L1MC5 LINE L1 -44 7917 7703 2377 85 3 0 chr2 141811515 141811808 -111444775 - AluSx SINE Alu -18 294 1 810 214 125 25 chr2 141811816 141812398 -111444185 - L1MC5 LINE L1 -37 7924 7246 319 270 116 93 chr2 141812412 141812517 -111444066 - L3 LINE CR1 -723 854 753 2207 120 10 0 chr2 141812517 141812818 -111443765 - AluSx SINE Alu -8 304 1 319 270 116 93 chr2 141812818 141812907 -111443676 - L3 LINE CR1 -824 753 667 1670 183 28 0 chr2 141812907 141813192 -111443391 + AluJb SINE Alu 1 293 -19 319 270 116 93 chr2 141813192 141813403 -111443180 - L3 LINE CR1 -910 667 439 694 234 42 0 chr2 141813515 141813682 -111442901 + MER63A DNA MER1_type 1 174 -36 430 191 147 37 chr2 141813725 141813861 -111442722 - MIR SINE MIR -21 241 91 453 218 36 9 chr2 141814141 141814251 -111442332 - MER3 DNA MER1_type -53 156 44 23 0 0 0 chr2 141815265 141815288 -111441295 + AT_rich Low_complexity Low_complexity 1 23 0 2022 148 0 3 chr2 141816293 141816590 -111439993 + AluJb SINE Alu 1 296 -16 1936 142 11 7 chr2 141816593 141816902 -111439681 + AluSx SINE Alu 1 310 0 2046 138 0 10 chr2 141817258 141817556 -111439027 - AluSx SINE Alu -17 295 1 1959 153 7 0 chr2 141817564 141817864 -111438719 - AluSx SINE Alu -10 302 1 2420 93 0 3 chr2 141817959 141818261 -111438322 - AluSq SINE Alu -12 301 1 338 233 93 0 chr2 141818404 141818490 -111438093 - L1MC4 LINE L1 -140 7902 7809 2181 128 0 0 chr2 141818621 141818918 -111437665 + AluSq SINE Alu 1 297 -16 1418 260 125 21 chr2 141819019 141819741 -111436842 - L1MC4 LINE L1 -24 7813 7004 1738 224 83 46 chr2 141819790 141819834 -111436749 - L1ME3A LINE L1 -99 6071 6030 2190 132 0 0 chr2 141819834 141820137 -111436446 + AluSx SINE Alu 6 308 -4 1738 224 83 46 chr2 141820137 141820611 -111435972 - L1ME3A LINE L1 -140 6030 5534 347 247 127 13 chr2 141820620 141820770 -111435813 - L1MC4 LINE L1 -987 7055 6889 621 117 89 10 chr2 141820816 141820937 -111435646 - L1MB7 LINE L1 -3 6168 6051 2343 97 0 10 chr2 141820938 141821247 -111435336 - AluSg SINE Alu -4 306 1 2067 108 10 14 chr2 141821322 141821617 -111434966 - AluSx SINE Alu -18 294 1 764 194 8 0 chr2 141821617 141821751 -111434832 - AluJo SINE Alu -176 136 2 1732 170 31 3 chr2 141821756 141822045 -111434538 - AluJb SINE Alu -15 297 1 203 200 22 0 chr2 141822393 141822438 -111434145 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 2121 122 3 3 chr2 141823956 141824252 -111432331 + AluSq SINE Alu 12 307 -6 2163 136 0 0 chr2 141824310 141824611 -111431972 - AluSq SINE Alu -10 303 3 325 254 0 0 chr2 141824613 141824676 -111431907 - L2 LINE L2 -21 3292 3230 1924 138 0 17 chr2 141824793 141825090 -111431493 + AluJo SINE Alu 6 297 -15 2700 26 3 0 chr2 141825507 141825809 -111430774 + AluY SINE Alu 1 303 -8 712 312 60 25 chr2 141825924 141826321 -111430262 - MLT1K LTR MaLR -52 536 126 245 214 79 0 chr2 141826443 141826532 -111430051 + L1ME4a LINE L1 6023 6118 -3 4280 167 61 32 chr2 141826535 141827313 -111429270 + L1MB7 LINE L1 4396 5150 -1034 2118 138 0 0 chr2 141827313 141827610 -111428973 + AluSx SINE Alu 1 297 -15 4280 167 61 32 chr2 141827610 141828522 -111428061 + L1MB7 LINE L1 5150 6136 -48 2266 101 0 7 chr2 141828522 141828819 -111427764 - AluSx SINE Alu -17 295 1 4280 167 61 32 chr2 141828819 141828863 -111427720 + L1MB7 LINE L1 6136 6177 -7 1990 132 3 16 chr2 141829341 141829644 -111426939 - AluJb SINE Alu -13 299 1 2275 91 7 0 chr2 141830355 141830641 -111425942 + AluSg SINE Alu 1 288 -22 2373 59 10 3 chr2 141830646 141830934 -111425649 + AluY SINE Alu 1 290 -21 224 83 65 46 chr2 141832559 141832667 -111423916 + (TATAA)n Simple_repeat Simple_repeat 5 114 0 1775 162 27 27 chr2 141833693 141833990 -111422593 + AluJb SINE Alu 1 297 -15 1631 183 17 27 chr2 141834541 141834842 -111421741 + AluJb SINE Alu 1 298 -14 488 278 199 0 chr2 141836813 141837029 -111419554 + L1ME4a LINE L1 5491 5749 -372 342 227 140 52 chr2 141837113 141837342 -111419241 + L1ME4a LINE L1 5868 6116 -5 875 285 101 36 chr2 141837774 141838405 -111418178 - L1MC4a LINE L1 -1873 5935 5264 2483 64 10 10 chr2 141838443 141838754 -111417829 - AluY SINE Alu 0 311 1 2546 57 7 0 chr2 141839317 141839614 -111416969 - AluY SINE Alu -12 299 1 195 254 175 48 chr2 141840169 141840295 -111416288 - L2 LINE L2 -206 3066 2925 2305 131 0 19 chr2 141841513 141841879 -111414704 - MER46B DNA MER2_type -2 234 1 265 304 0 13 chr2 141842032 141842111 -111414472 - MIR SINE MIR -108 100 23 12312 116 28 22 chr2 141844621 141846536 -111410047 + L1PBa LINE L1 2 1927 -4936 1049 95 7 0 chr2 141846538 141846675 -111409908 + AluSp SINE Alu 1 138 -175 1553 93 8 59 chr2 141846675 141846912 -111409671 + AluSc SINE Alu 78 302 -7 445 188 58 36 chr2 141846915 141847053 -111409530 - MER83B-int LTR ERV1 -1500 3380 3240 27 29 0 0 chr2 141847122 141847156 -111409427 + AT_rich Low_complexity Low_complexity 1 34 0 309 135 0 0 chr2 141847768 141847820 -111408763 + (CA)n Simple_repeat Simple_repeat 1 52 0 2263 102 0 3 chr2 141847964 141848259 -111408324 - AluSx SINE Alu -18 294 1 315 0 0 0 chr2 141848355 141848390 -111408193 + (TAA)n Simple_repeat Simple_repeat 1 35 0 1777 145 6 69 chr2 141848478 141848796 -111407787 - AluJo SINE Alu -1 311 14 2362 98 0 7 chr2 141849692 141849998 -111406585 - AluSx SINE Alu -8 304 1 344 281 91 0 chr2 141850194 141850315 -111406268 + MIR SINE MIR 23 154 -108 192 273 45 23 chr2 141850600 141850688 -111405895 - MIR SINE MIR -1 261 172 1667 141 104 0 chr2 141852229 141852499 -111404084 - AluSx SINE Alu -14 298 1 361 319 43 7 chr2 141852844 141852982 -111403601 - MIR SINE MIR -71 191 49 1382 188 50 11 chr2 141853010 141853271 -111403312 - AluJo SINE Alu -37 275 5 360 309 112 49 chr2 141853659 141853882 -111402701 + MIR SINE MIR 20 256 -6 1680 116 9 4 chr2 141854183 141854416 -111402167 + AluSq SINE Alu 1 234 -79 351 333 17 28 chr2 141854482 141854662 -111401921 + CT-rich Low_complexity Low_complexity 1 178 0 306 73 0 0 chr2 141854819 141854860 -111401723 + (A)n Simple_repeat Simple_repeat 1 41 0 2173 108 0 29 chr2 141854878 141855193 -111401390 - AluSq SINE Alu -7 306 1 2316 102 7 3 chr2 141855601 141855904 -111400679 + AluSx SINE Alu 1 304 -8 2349 84 0 3 chr2 141856041 141856338 -111400245 + AluSg SINE Alu 1 296 -14 664 260 31 35 chr2 141856477 141856731 -111399852 + MIR SINE MIR 7 259 -3 221 139 23 0 chr2 141856755 141856798 -111399785 + (TA)n Simple_repeat Simple_repeat 2 45 0 300 256 35 0 chr2 141856798 141856884 -111399699 - L1MC4 LINE L1 -1339 6703 6615 215 198 23 47 chr2 141856884 141856970 -111399613 + (TATATG)n Simple_repeat Simple_repeat 4 87 0 1602 89 5 14 chr2 141857634 141857848 -111398735 + AluSq SINE Alu 85 296 -17 2681 51 0 0 chr2 141858312 141858623 -111397960 - AluY SINE Alu 0 311 1 1708 123 0 4 chr2 141859657 141859900 -111396683 - AluSx SINE Alu -16 296 55 381 265 124 60 chr2 141859947 141860132 -111396451 + L2 LINE L2 3117 3313 0 1586 146 31 59 chr2 141860177 141860364 -111396219 - AluJo SINE Alu 0 312 121 187 31 62 0 chr2 141860364 141860396 -111396187 + T-rich Low_complexity Low_complexity 2 35 0 1952 113 0 3 chr2 141860396 141860679 -111395904 - AluY SINE Alu -29 282 1 1586 146 31 59 chr2 141860679 141860811 -111395772 - AluJo SINE Alu -189 123 1 232 188 0 21 chr2 141860958 141861006 -111395577 + (TATG)n Simple_repeat Simple_repeat 3 49 0 707 135 0 0 chr2 141861290 141861386 -111395197 - AluS SINE Alu -216 97 2 597 126 0 32 chr2 141861395 141861490 -111395093 - FRAM SINE Alu -25 151 60 678 235 152 82 chr2 141861821 141861853 -111394730 - MER46C DNA MER2_type -1 337 309 3815 153 7 30 chr2 141861853 141862343 -111394240 + L1MA5 LINE L1 5620 6091 -209 2180 121 0 0 chr2 141862343 141862650 -111393933 + AluSx SINE Alu 1 307 -5 3815 153 7 30 chr2 141862650 141862856 -111393727 + L1MA5 LINE L1 6091 6300 0 678 235 152 82 chr2 141862856 141863138 -111393445 - MER46C DNA MER2_type -29 309 1 1589 112 161 8 chr2 141863913 141864173 -111392410 + AluSg SINE Alu 1 300 0 275 93 47 0 chr2 141864661 141864704 -111391879 - Tigger3(Golem) DNA MER2_type -542 2487 2443 750 144 98 23 chr2 141864710 141864842 -111391741 + AluJo SINE Alu 7 148 -164 1173 204 14 0 chr2 141865197 141865408 -111391175 + Tigger3(Golem) DNA MER2_type 2 215 -2814 1023 153 11 47 chr2 141865409 141865599 -111390984 + AluJo SINE Alu 2 184 -128 1032 148 69 21 chr2 141865599 141865788 -111390795 - AluJo SINE Alu -112 200 3 3657 120 44 7 chr2 141865790 141866355 -111390228 + Tigger3(Golem) DNA MER2_type 2444 3029 0 208 243 0 43 chr2 141866545 141866615 -111389968 + L2 LINE L2 3188 3254 -18 978 136 13 0 chr2 141867193 141867348 -111389235 + AluSg/x SINE Alu 152 308 -2 1083 111 0 13 chr2 141867359 141867512 -111389071 + AluSq/x SINE Alu 1 151 -161 400 105 0 0 chr2 141867512 141867569 -111389014 + Alu SINE Alu 241 297 -14 384 203 43 0 chr2 141867610 141867679 -111388904 + L2 LINE L2 3199 3270 -43 22 35 0 0 chr2 141869515 141869544 -111387039 + AT_rich Low_complexity Low_complexity 1 29 0 546 142 115 62 chr2 141869547 141869660 -111386923 - FLAM_A SINE Alu -10 123 5 622 147 18 0 chr2 141869683 141869792 -111386791 - HY1 scRNA scRNA 0 112 2 1024 150 44 40 chr2 141870206 141870258 -111386325 + AluJo SINE Alu 86 136 -176 2428 70 0 3 chr2 141870258 141870570 -111386013 + AluY SINE Alu 1 311 0 1024 150 44 40 chr2 141870570 141870743 -111385840 + AluJo SINE Alu 136 312 0 525 244 37 15 chr2 141870776 141870911 -111385672 + MLT1K LTR MaLR 12 149 -356 666 190 0 0 chr2 141871115 141871236 -111385347 + FRAM SINE Alu 48 168 -8 1365 192 11 24 chr2 141871312 141871623 -111384960 + AluJo SINE Alu 1 307 0 366 289 0 58 chr2 141872506 141872696 -111383887 + (CAA)n Simple_repeat Simple_repeat 2 180 0 302 243 11 57 chr2 141872817 141872994 -111383589 + (CAA)n Simple_repeat Simple_repeat 1 169 0 638 253 148 9 chr2 141872994 141873223 -111383360 - MIR SINE MIR 0 262 2 309 307 192 0 chr2 141873423 141873603 -111382980 + MIR SINE MIR 8 219 -43 246 291 35 0 chr2 141873858 141873944 -111382639 + L1ME LINE L1 5792 5880 -241 2258 82 3 0 chr2 141874035 141874328 -111382255 - AluSg SINE Alu -16 294 1 1841 182 21 19 chr2 141874365 141874738 -111381845 + MLT1A2 LTR MaLR 1 374 0 1936 101 3 40 chr2 141875196 141875514 -111381069 - AluSx SINE Alu 0 307 1 526 283 139 46 chr2 141875791 141876180 -111380403 + MLT1K LTR MaLR 142 566 -22 265 280 47 65 chr2 141876197 141876304 -111380279 + MIR SINE MIR 32 136 -126 1766 164 0 7 chr2 141876385 141876684 -111379899 - AluJb SINE Alu -15 297 1 539 235 6 62 chr2 141877903 141878065 -111378518 - MIR SINE MIR 0 262 110 2212 84 10 0 chr2 141878071 141878367 -111378216 + AluSp SINE Alu 1 299 -14 618 236 36 7 chr2 141878463 141878603 -111377980 + MLT1J LTR MaLR 239 382 -129 231 188 0 0 chr2 141878663 141878711 -111377872 + (TATATG)n Simple_repeat Simple_repeat 1 48 0 2382 57 0 3 chr2 141880397 141880693 -111375890 - AluY SINE Alu -15 296 2 1425 163 0 36 chr2 141881045 141881297 -111375286 - AluJb SINE Alu -63 249 7 1154 139 5 36 chr2 141881802 141881996 -111374587 - MER5A DNA MER1_type -1 188 1 234 184 102 20 chr2 141882033 141882131 -111374452 - L1MB3 LINE L1 0 6183 6078 1841 179 86 25 chr2 141882225 141882656 -111373927 + MSTB2 LTR MaLR 1 457 0 184 264 19 0 chr2 141883741 141883794 -111372789 - L2 LINE L2 -5 3267 3214 288 0 0 0 chr2 141883869 141883900 -111372683 + L1MC5 LINE L1 7753 7783 -178 1201 101 0 0 chr2 141883905 141884063 -111372520 + FRAM SINE Alu 1 155 -21 325 260 55 24 chr2 141884088 141884215 -111372368 + L1MC5 LINE L1 7786 7916 -45 2038 121 37 0 chr2 141884237 141884534 -111372049 + AluSq SINE Alu 4 311 -2 231 280 90 0 chr2 141884807 141884907 -111371676 - MIR SINE MIR -68 140 32 1836 118 0 46 chr2 141885786 141886092 -111370491 + AluSx SINE Alu 1 292 -20 1995 119 3 0 chr2 141886484 141886778 -111369805 - AluSx SINE Alu -2 310 16 2287 104 17 43 chr2 141887010 141887355 -111369228 - MER1B DNA MER1_type 0 337 2 2160 116 0 0 chr2 141887536 141887837 -111368746 - AluSc SINE Alu -8 301 1 431 172 25 74 chr2 141888378 141888423 -111368160 - L1MB3 LINE L1 0 6183 6137 2007 130 0 0 chr2 141888423 141888716 -111367867 + AluSx SINE Alu 1 293 -19 431 172 25 74 chr2 141888716 141888792 -111367791 - L1MB3 LINE L1 -46 6137 6068 234 0 0 0 chr2 141889345 141889371 -111367212 + (TG)n Simple_repeat Simple_repeat 2 27 0 915 73 81 0 chr2 141890053 141890176 -111366407 - MER85 DNA T2_type -6 133 1 272 256 160 19 chr2 141890501 141890657 -111365926 - MER5B DNA MER1_type 0 178 1 21 36 0 0 chr2 141891414 141891442 -111365141 + AT_rich Low_complexity Low_complexity 1 28 0 1957 117 7 7 chr2 141891452 141891752 -111364831 + AluSq SINE Alu 6 305 -8 813 177 0 73 chr2 141891778 141891970 -111364613 + FRAM SINE Alu 1 175 -1 1789 160 7 3 chr2 141891997 141892297 -111364286 - AluJb SINE Alu -11 301 1 2436 55 0 0 chr2 141892952 141893259 -111363324 - AluY SINE Alu -4 307 1 2578 139 12 9 chr2 141893259 141893689 -111362894 - L1MB2 LINE L1 -42 6129 5699 1284 103 5 0 chr2 141893697 141893881 -111362702 - AluSc SINE Alu -10 299 115 444 274 10 15 chr2 141893994 141894191 -111362392 - AluSq SINE Alu -107 196 1 643 152 0 0 chr2 141894226 141894338 -111362245 + AluSg/x SINE Alu 199 310 0 564 314 86 19 chr2 141894342 141894762 -111361821 + L1ME4a LINE L1 5384 5831 -290 824 157 8 0 chr2 141894805 141894939 -111361644 - AluJo SINE Alu -177 135 1 495 85 0 32 chr2 141894998 141895092 -111361491 + (TA)n Simple_repeat Simple_repeat 2 92 0 192 309 43 21 chr2 141895124 141895218 -111361365 + MER5B DNA MER1_type 4 99 -79 414 100 0 0 chr2 141895486 141895546 -111361037 + (TA)n Simple_repeat Simple_repeat 2 61 0 2023 107 0 0 chr2 141895546 141895826 -111360757 - AluSx SINE Alu -19 293 14 2248 93 3 0 chr2 141896854 141897156 -111359427 + AluY SINE Alu 1 303 -8 1864 159 0 3 chr2 141897241 141897549 -111359034 - AluJb SINE Alu -5 307 1 361 247 319 0 chr2 141897757 141897923 -111358660 + MIR SINE MIR 4 222 -40 355 254 127 17 chr2 141898031 141898212 -111358371 - L1MC4a LINE L1 -1926 5882 5682 582 232 16 0 chr2 141898212 141898337 -111358246 + FLAM_C SINE Alu 1 127 -6 1908 120 0 0 chr2 141898726 141898992 -111357591 - AluSq SINE Alu -47 266 1 373 136 15 0 chr2 141899004 141899070 -111357513 - MER41B LTR ERV1 -88 547 481 30 59 0 0 chr2 141899708 141899759 -111356824 + AT_rich Low_complexity Low_complexity 1 51 0 2027 120 7 0 chr2 141901343 141901660 -111354923 + AluSx SINE Alu 1 319 0 1509 300 205 9 chr2 141901971 141902971 -111353612 - L2 LINE L2 0 3313 2044 1992 86 36 26 chr2 141902971 141903274 -111353309 + AluSq SINE Alu 1 306 -7 1509 300 205 9 chr2 141903274 141903424 -111353159 - L2 LINE L2 -1269 2044 1925 612 311 7 82 chr2 141903430 141903700 -111352883 - L2 LINE L2 -1975 1339 1090 21 0 0 0 chr2 141906017 141906038 -111350545 + AT_rich Low_complexity Low_complexity 1 21 0 812 153 8 0 chr2 141906038 141906162 -111350421 - FLAM_C SINE Alu -8 125 1 2170 125 0 0 chr2 141906242 141906555 -111350028 + AluSq SINE Alu 1 313 0 930 194 19 14 chr2 141906735 141906946 -111349637 + AluJo SINE Alu 84 295 -17 315 269 43 91 chr2 141906995 141907096 -111349487 - L1ME4a LINE L1 -71 6050 5961 2115 105 0 0 chr2 141907096 141907382 -111349201 - AluSg SINE Alu -24 286 1 315 269 43 91 chr2 141907382 141907466 -111349117 - L1ME4a LINE L1 -160 5961 5874 628 225 192 5 chr2 141907878 141908108 -111348475 + L1ME3 LINE L1 5433 5691 -471 2153 117 0 3 chr2 141908122 141908431 -111348152 + AluSx SINE Alu 1 308 -4 551 246 111 49 chr2 141908431 141908601 -111347982 + L1M4 LINE L1 4340 4537 -1609 797 273 131 16 chr2 141908601 141908967 -111347616 + MLT1I LTR MaLR 1 408 -1 551 246 111 49 chr2 141908967 141909084 -111347499 + L1M4 LINE L1 4537 4645 -1501 317 260 83 39 chr2 141909135 141909316 -111347267 + L1M4 LINE L1 4742 4930 -1216 693 135 0 18 chr2 141909812 141909923 -111346660 - L1PA15 LINE L1 0 6165 6057 585 222 124 32 chr2 141910159 141910344 -111346239 + L1ME3 LINE L1 5956 6157 -5 211 270 110 20 chr2 141910576 141910676 -111345907 + L2 LINE L2 3159 3267 -5 1582 178 27 17 chr2 141912691 141912983 -111343600 + AluJo SINE Alu 7 301 -11 910 218 68 21 chr2 141912989 141913223 -111343360 - MIR SINE MIR -6 256 12 758 173 28 56 chr2 141913278 141913457 -111343126 + L1MC4 LINE L1 7869 8042 0 1823 181 0 0 chr2 141913465 141913769 -111342814 + AluJb SINE Alu 1 304 -8 2334 100 10 0 chr2 141913771 141914080 -111342503 + AluSx SINE Alu 1 312 0 1488 214 43 0 chr2 141914111 141914391 -111342192 + AluJb SINE Alu 1 292 -20 2234 95 0 17 chr2 141914393 141914714 -111341869 + AluSx SINE Alu 1 312 0 270 0 0 0 chr2 141914879 141914909 -111341674 + (CAAAC)n Simple_repeat Simple_repeat 3 32 0 1169 231 45 17 chr2 141914909 141915199 -111341384 + AluJo SINE Alu 6 303 -9 1652 191 7 7 chr2 141915679 141915973 -111340610 + AluSx SINE Alu 1 294 -18 348 274 69 12 chr2 141916565 141916829 -111339754 + L1MC4a LINE L1 5605 5802 -319 23 33 0 0 chr2 141917099 141917129 -111339454 + AT_rich Low_complexity Low_complexity 1 30 0 684 222 19 37 chr2 141917564 141917726 -111338857 + FRAM SINE Alu 1 158 -18 2272 106 0 0 chr2 141917727 141918019 -111338564 + AluSg SINE Alu 1 292 -18 2124 118 7 10 chr2 141918408 141918713 -111337870 - AluSx SINE Alu -8 304 1 1293 118 11 0 chr2 141919127 141919305 -111337278 - AluSc SINE Alu -13 296 117 2309 95 0 7 chr2 141919330 141919624 -111336959 - AluSx SINE Alu -20 292 1 185 81 0 27 chr2 141919636 141919673 -111336910 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 2267 82 0 7 chr2 141919673 141919954 -111336629 - AluY SINE Alu -32 279 1 1481 203 90 56 chr2 141920054 141920498 -111336085 + L1MB3 LINE L1 3800 4258 -1888 2501 62 0 13 chr2 141921132 141921436 -111335147 - AluY SINE Alu -11 300 1 259 265 68 53 chr2 141921451 141921583 -111335000 + L1MB3 LINE L1 5593 5726 -395 66 80 0 0 chr2 141921740 141921890 -111334693 + AT_rich Low_complexity Low_complexity 1 150 0 1361 144 27 97 chr2 141922946 141923244 -111333339 + AluJb SINE Alu 1 277 -35 351 0 0 0 chr2 141923244 141923283 -111333300 + (CAAAA)n Simple_repeat Simple_repeat 4 42 0 2245 99 0 0 chr2 141923349 141923660 -111332923 + AluSx SINE Alu 1 311 0 499 184 35 26 chr2 141923878 141923992 -111332591 + FLAM_A SINE Alu 8 122 -20 1402 146 71 7 chr2 141924139 141924420 -111332163 - L1MB4 LINE L1 -6 6174 5876 1027 228 9 0 chr2 141925424 141925635 -111330948 + AluJo SINE Alu 85 297 -15 232 251 90 67 chr2 141926657 141926880 -111329703 - L1MC4 LINE L1 -124 7918 7691 2493 62 10 3 chr2 141927266 141927575 -111329008 + AluY SINE Alu 1 311 0 2265 110 0 3 chr2 141928641 141928942 -111327641 + AluSc SINE Alu 1 300 -9 382 291 9 9 chr2 141929603 141929713 -111326870 - MIR SINE MIR -66 142 33 1973 157 0 20 chr2 141930267 141930573 -111326010 - AluJb SINE Alu -12 300 1 2289 88 0 13 chr2 141931684 141932017 -111324566 + AluSx SINE Alu 1 312 0 1506 92 88 36 chr2 141932516 141932766 -111323817 + THE1B LTR MaLR 1 263 -101 297 53 0 0 chr2 141934021 141934059 -111322524 + L1MB3 LINE L1 5704 5741 -442 2303 144 54 34 chr2 141934060 141934133 -111322450 + L1MB3 LINE L1 5708 5778 -405 1017 142 151 19 chr2 141934133 141934338 -111322245 + MER46A DNA MER2_type 1 232 -4 2303 144 54 34 chr2 141934338 141934609 -111321974 + L1MB3 LINE L1 5778 6066 -117 2109 90 24 0 chr2 141934609 141934897 -111321686 + AluSp SINE Alu 1 295 -18 2303 144 54 34 chr2 141934897 141935017 -111321566 + L1MB3 LINE L1 6066 6182 -1 1962 126 3 3 chr2 141936462 141936764 -111319819 + AluSx SINE Alu 1 302 -10 2139 125 0 3 chr2 141936810 141937121 -111319462 - AluSx SINE Alu -2 310 1 266 345 96 13 chr2 141937190 141937419 -111319164 + L2 LINE L2 2028 2275 -1039 602 195 0 0 chr2 141937479 141937592 -111318991 - FLAM_A SINE Alu -4 138 26 2036 111 3 66 chr2 141937653 141937986 -111318597 - AluSx SINE Alu 0 312 1 2520 68 7 3 chr2 141938160 141938469 -111318114 + AluY SINE Alu 1 310 -1 2338 101 3 0 chr2 141938485 141938791 -111317792 + AluSx SINE Alu 1 307 -5 183 264 0 0 chr2 141938843 141938896 -111317687 + L2 LINE L2 2291 2343 -971 228 244 0 0 chr2 141938965 141939010 -111317573 + CT-rich Low_complexity Low_complexity 3 47 0 641 152 103 91 chr2 141939319 141939484 -111317099 + MER68 LTR ERV1 24 190 -372 2023 127 42 0 chr2 141939495 141939779 -111316804 - AluJb SINE Alu -10 302 7 1615 165 103 0 chr2 141939786 141940058 -111316525 - AluJb SINE Alu -12 300 1 1320 214 31 6 chr2 141940069 141940391 -111316192 - L1MC3 LINE L1 -1 7784 7455 552 136 11 0 chr2 141940393 141940481 -111316102 - L1MC3 LINE L1 -372 7413 7325 272 221 78 0 chr2 141940504 141940581 -111316002 - L1MC5 LINE L1 -182 7779 7697 1332 180 89 99 chr2 141940581 141940850 -111315733 + Charlie2a DNA MER1_type 693 956 -1906 2186 138 0 6 chr2 141940850 141941161 -111315422 - AluJb SINE Alu -3 309 1 1332 180 89 99 chr2 141941161 141941386 -111315197 + Charlie2a DNA MER1_type 956 1182 -1680 411 21 0 0 chr2 141941386 141941434 -111315149 + (CA)n Simple_repeat Simple_repeat 1 48 0 1946 209 98 4 chr2 141941436 141941905 -111314678 + MLT2B1 LTR ERVL 8 520 0 335 211 73 0 chr2 141941913 141942036 -111314547 + Charlie2a DNA MER1_type 1221 1352 -1510 451 282 146 0 chr2 141942273 141942300 -111314283 - L1ME LINE L1 -350 5771 5749 297 0 0 0 chr2 141942300 141942333 -111314250 + (TTAGG)n Simple_repeat Simple_repeat 3 35 0 451 282 146 0 chr2 141942333 141942511 -111314072 - L1ME LINE L1 -372 5749 5536 510 197 82 16 chr2 141942671 141942793 -111313790 - L2 LINE L2 -1 3312 3183 279 210 121 24 chr2 141943817 141943941 -111312642 - L1ME4a LINE L1 -11 6110 5975 2201 129 7 0 chr2 141943984 141944294 -111312289 + AluSx SINE Alu 1 312 0 2519 59 0 13 chr2 141944457 141944760 -111311823 - AluY SINE Alu -12 299 1 1128 258 35 12 chr2 141945090 141945437 -111311146 - LTR16A LTR ERVL -30 420 72 949 343 50 13 chr2 141945661 141946198 -111310385 - ERVL LTR ERVL -438 5326 4770 1139 127 6 0 chr2 141946219 141946377 -111310206 - AluSp SINE Alu -19 294 136 1837 68 107 46 chr2 141946379 141946659 -111309924 - AluSx SINE Alu -15 297 1 2681 201 105 6 chr2 141946832 141947458 -111309125 - MER76 LTR ERV 0 688 1 1997 102 195 7 chr2 141947614 141948028 -111308555 - LTR14B LTR ERVK 0 608 1 456 312 32 0 chr2 141948030 141948184 -111308399 - ERVL LTR ERVL -1345 4419 4261 225 269 0 0 chr2 141948187 141948239 -111308344 + LTR30 LTR ERV1 1 52 -670 881 53 29 0 chr2 141948239 141948366 -111308217 + LTR12 LTR ERV1 167 2017 -421 302 235 20 20 chr2 141948366 141948468 -111308115 + LTR30 LTR ERV1 542 643 -79 1656 106 35 0 chr2 141948468 141948695 -111307888 + LTR12 LTR ERV1 480 714 0 1564 293 100 64 chr2 141948695 141949451 -111307132 - ERVL LTR ERVL -1432 4222 3411 1900 150 7 7 chr2 141949451 141949745 -111306838 - AluSx SINE Alu -18 294 1 1564 293 100 64 chr2 141949745 141950120 -111306463 - ERVL LTR ERVL -2243 3411 3051 2372 141 67 10 chr2 141950313 141950716 -111305867 + MSTB LTR MaLR 1 426 0 219 36 0 0 chr2 141950887 141950915 -111305668 + (TAAAAA)n Simple_repeat Simple_repeat 3 30 0 1861 136 51 14 chr2 141951351 141951645 -111304938 - AluJo SINE Alu -7 305 1 2010 99 4 0 chr2 141951763 141952016 -111304567 + AluSp SINE Alu 42 295 -18 1452 275 90 13 chr2 141952249 141952726 -111303857 - LTR33 LTR ERVL -7 514 1 5234 175 69 21 chr2 141952761 141953466 -111303117 + Tigger6a DNA MER2_type 2 672 -925 723 194 0 0 chr2 141953466 141953590 -111302993 + FLAM_A SINE Alu 1 124 -9 5234 175 69 21 chr2 141953590 141953743 -111302840 + Tigger6a DNA MER2_type 672 816 -781 2495 68 0 7 chr2 141953743 141954050 -111302533 - AluY SINE Alu -6 305 1 5234 175 69 21 chr2 141954050 141954223 -111302360 + Tigger6a DNA MER2_type 816 1083 0 463 205 106 31 chr2 141954231 141954392 -111302191 - L1ME LINE L1 -302 5819 5647 870 143 0 90 chr2 141954394 141954583 -111302000 - FRAM SINE Alu -6 170 1 428 284 66 16 chr2 141954584 141954767 -111301816 - L1ME LINE L1 -470 5651 5460 2469 94 0 0 chr2 141954856 141955164 -111301419 + AluSx SINE Alu 1 308 -4 1939 138 17 0 chr2 141955645 141955936 -111300647 + AluJb SINE Alu 5 300 -12 226 304 210 22 chr2 141955980 141956161 -111300422 - MIR SINE MIR -14 248 34 2182 122 0 22 chr2 141956198 141956517 -111300066 + AluSx SINE Alu 1 312 0 297 0 0 0 chr2 141956571 141956604 -111299979 + (TG)n Simple_repeat Simple_repeat 2 34 0 2202 99 35 0 chr2 141956790 141957073 -111299510 - AluSq SINE Alu -20 293 1 781 186 110 127 chr2 141958837 141959310 -111297273 + MER4C LTR ERV1 1 465 0 1066 86 0 0 chr2 141959793 141959921 -111296662 + AluSq/x SINE Alu 1 128 -184 246 32 0 0 chr2 141959921 141959952 -111296631 + (CAAAA)n Simple_repeat Simple_repeat 3 33 0 4782 104 21 3 chr2 141959957 141960656 -111295927 + L1PA15 LINE L1 5325 6036 -129 697 153 76 15 chr2 141960707 141960838 -111295745 + L1PA15 LINE L1 6022 6160 -5 1439 124 50 121 chr2 141960838 141961201 -111295382 + MLT1A1 LTR MaLR 29 365 0 2089 211 104 2 chr2 141961202 141961710 -111294873 + L1ME1 LINE L1 5603 6162 -4 28 79 0 0 chr2 141961712 141961775 -111294808 + AT_rich Low_complexity Low_complexity 1 63 0 1025 210 25 0 chr2 141961776 141961976 -111294607 - AluJo SINE Alu -20 292 88 259 268 108 52 chr2 141962086 141962198 -111294385 + L1M4 LINE L1 3898 4002 -2144 1678 151 21 28 chr2 141962198 141962526 -111294057 + AluJb SINE Alu 1 326 0 259 268 108 52 chr2 141962526 141962662 -111293921 + L1M4 LINE L1 4002 4161 -1985 592 241 202 20 chr2 141962674 141962877 -111293706 - MIR SINE MIR -17 245 6 1222 29 0 7 chr2 141962998 141963137 -111293446 + AluY SINE Alu 1 138 -173 469 186 109 45 chr2 141963219 141963375 -111293208 - LTR45B LTR ERV1 0 489 324 1568 163 22 22 chr2 141963882 141964159 -111292424 + AluJb SINE Alu 1 277 -35 380 264 25 0 chr2 141964482 141964603 -111291980 + L1M4 LINE L1 4485 4608 -1538 2093 102 17 7 chr2 141964791 141965085 -111291498 + AluSx SINE Alu 1 297 -15 824 179 7 0 chr2 141965090 141965230 -111291353 + AluJb SINE Alu 1 141 -171 22 0 0 0 chr2 141965258 141965280 -111291303 + AT_rich Low_complexity Low_complexity 1 22 0 387 127 0 0 chr2 141966757 141966820 -111289763 - Alu SINE Alu 0 302 240 241 310 18 18 chr2 141967444 141967557 -111289026 + L1MC4a LINE L1 5756 5868 -1940 302 298 70 44 chr2 141967602 141967760 -111288823 + L1MC4a LINE L1 5870 6031 -1777 541 214 35 0 chr2 141967811 141967934 -111288649 - L1MB3 LINE L1 -21 6162 6025 2656 63 3 16 chr2 141968144 141968508 -111288075 - L1P4 LINE L1 -552 5616 5258 3767 55 12 6 chr2 141968508 141968997 -111287586 + L1PA10 LINE L1 5675 6166 -2 3454 179 108 15 chr2 141969039 141969493 -111287090 - L1MA9 LINE L1 0 6312 5902 1061 145 58 87 chr2 141969493 141969734 -111286849 + MER46A DNA MER2_type 2 235 -1 3454 179 108 15 chr2 141969734 141970284 -111286299 - L1MA9 LINE L1 -410 5902 4889 21 0 0 0 chr2 141971537 141971558 -111285025 + AT_rich Low_complexity Low_complexity 1 21 0 734 185 51 82 chr2 141971584 141971779 -111284804 + MER5A DNA MER1_type 1 189 0 245 206 39 39 chr2 141972365 141972467 -111284116 - L1MB3 LINE L1 -206 5915 5814 356 186 14 0 chr2 141972496 141972566 -111284017 - AluJo SINE Alu -6 296 226 937 145 0 14 chr2 141972573 141972718 -111283865 - AluJo SINE Alu -169 143 1 24 0 0 0 chr2 141973135 141973159 -111283424 + AT_rich Low_complexity Low_complexity 1 24 0 2388 81 0 3 chr2 141973167 141973465 -111283118 + AluSq SINE Alu 1 297 -16 21 57 0 0 chr2 141974788 141974823 -111281760 + AT_rich Low_complexity Low_complexity 1 35 0 1680 188 3 7 chr2 141974975 141975278 -111281305 - AluJo SINE Alu -10 302 1 817 82 0 0 chr2 141975792 141975902 -111280681 + L1PA8 LINE L1 6054 6163 -9 1685 118 141 0 chr2 141976608 141976878 -111279705 + AluSx SINE Alu 3 310 -2 524 247 103 11 chr2 141976890 141977064 -111279519 + L1MC5 LINE L1 7726 7915 -46 1818 155 10 16 chr2 141977164 141977467 -111279116 - AluJb SINE Alu -11 301 1 2157 110 0 13 chr2 141977602 141977910 -111278673 - AluSg SINE Alu -6 304 1 187 191 32 0 chr2 141978011 141978074 -111278509 + (TA)n Simple_repeat Simple_repeat 2 66 0 2207 107 3 0 chr2 141978731 141979022 -111277561 - AluSx SINE Alu -20 292 1 655 213 35 30 chr2 141979627 141979796 -111276787 - MIR SINE MIR -92 170 1 575 244 167 6 chr2 141981191 141981347 -111275236 + MER5A DNA MER1_type 9 189 0 26 0 0 0 chr2 141981638 141981664 -111274919 + AT_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr2 141982450 141982473 -111274110 + AT_rich Low_complexity Low_complexity 1 23 0 27 29 0 0 chr2 141982722 141982756 -111273827 + AT_rich Low_complexity Low_complexity 1 34 0 2248 101 0 0 chr2 141982808 141983106 -111273477 - AluSg SINE Alu -12 298 1 1929 113 8 0 chr2 141983254 141983520 -111273063 + AluSp SINE Alu 1 268 -45 22 0 0 0 chr2 141983824 141983846 -111272737 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 141983863 141983884 -111272699 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 141984799 141984820 -111271763 + AT_rich Low_complexity Low_complexity 1 21 0 1773 108 0 0 chr2 141985478 141985709 -111270874 - AluSq SINE Alu -82 231 1 234 229 131 16 chr2 141987111 141987172 -111269411 - L2 LINE L2 -2 3311 3244 358 111 48 0 chr2 141987914 141987977 -111268606 - AluSx SINE Alu -2 298 233 1466 85 0 16 chr2 141987978 141988166 -111268417 - AluSx SINE Alu -127 185 1 1415 112 137 13 chr2 141988180 141988413 -111268170 - AluSg SINE Alu -4 306 45 293 222 111 0 chr2 141988856 141988973 -111267610 + MER113 DNA MER1_type? 1 130 -391 248 232 29 14 chr2 141989045 141989114 -111267469 + MER113 DNA MER1_type? 452 521 0 1868 169 0 3 chr2 141990756 141991051 -111265532 - AluJo SINE Alu -13 299 6 213 94 0 0 chr2 141992363 141992395 -111264188 + (A)n Simple_repeat Simple_repeat 1 32 0 860 233 92 12 chr2 141992723 141992972 -111263611 + Charlie1b DNA MER1_type 2 270 -253 248 132 0 0 chr2 141992978 141993016 -111263567 + tRNA-Ser-AGC tRNA tRNA 1 38 -47 * 648 145 57 113 chr2 141993013 141993295 -111263288 + Charlie1b DNA MER1_type 258 523 0 279 203 14 54 chr2 141993683 141993757 -111262826 + MIR SINE MIR 136 206 -56 1958 148 7 0 chr2 141993862 141994166 -111262417 + AluJb SINE Alu 6 311 -1 2026 123 17 0 chr2 141994313 141994605 -111261978 - AluSg SINE Alu -13 297 1 2226 80 0 10 chr2 141994831 141995142 -111261441 + AluY SINE Alu 1 308 0 225 286 0 39 chr2 141995603 141995680 -111260903 + L2 LINE L2 3199 3272 0 21 36 0 0 chr2 141995792 141995820 -111260763 + AT_rich Low_complexity Low_complexity 1 28 0 981 199 0 0 chr2 141995913 141996084 -111260499 - FRAM SINE Alu -13 163 1 1665 139 0 0 chr2 141996608 141996845 -111259738 - AluSx SINE Alu -15 297 61 7629 78 3 7 chr2 141997072 141998116 -111258467 - L1PA5 LINE L1 -4061 2085 1046 * 26546 41 5 0 chr2 141998112 142002182 -111254401 + L1PA5 LINE L1 2070 6153 -1 677 235 84 63 chr2 142002317 142002773 -111253810 + MLT1H LTR MaLR 1 549 0 2256 98 0 3 chr2 142004649 142004944 -111251639 - AluSx SINE Alu -18 294 1 189 214 0 0 chr2 142005775 142005817 -111250766 + GA-rich Low_complexity Low_complexity 5 46 0 577 285 11 21 chr2 142005821 142006007 -111250576 - Charlie7 DNA MER1_type -2335 277 94 1335 136 15 5 chr2 142006365 142006571 -111250012 - AluJb SINE Alu -75 237 30 192 324 0 0 chr2 142006614 142006682 -111249901 + T-rich Low_complexity Low_complexity 3 70 0 2201 115 0 10 chr2 142007047 142007360 -111249223 + AluSx SINE Alu 3 312 0 567 256 40 34 chr2 142007414 142007590 -111248993 - MIR SINE MIR -13 249 73 193 339 46 0 chr2 142008018 142008083 -111248500 - L3 LINE CR1 -892 685 618 207 271 14 14 chr2 142008384 142008454 -111248129 + L2 LINE L2 3201 3270 -2 2034 116 3 45 chr2 142008505 142008816 -111247767 + AluSx SINE Alu 1 298 -14 25 31 0 0 chr2 142008991 142009023 -111247560 + AT_rich Low_complexity Low_complexity 1 32 0 248 328 28 61 chr2 142011106 142011286 -111245297 + MLT1L LTR MaLR 3 176 -439 2140 98 0 11 chr2 142011883 142012170 -111244413 + AluSq SINE Alu 1 284 -29 4011 132 71 12 chr2 142012201 142012951 -111243632 - L1MA6 LINE L1 0 6300 5507 21 36 0 0 chr2 142013774 142013802 -111242781 + AT_rich Low_complexity Low_complexity 1 28 0 33 0 0 0 chr2 142013811 142013844 -111242739 + AT_rich Low_complexity Low_complexity 1 33 0 924 135 23 0 chr2 142013844 142013977 -111242606 - AluJb SINE Alu -176 136 1 189 289 19 0 chr2 142014167 142014219 -111242364 + MIR SINE MIR 87 139 -123 194 85 0 64 chr2 142014220 142014267 -111242316 + (A)n Simple_repeat Simple_repeat 1 44 0 217 246 0 35 chr2 142014307 142014364 -111242219 + MIR SINE MIR 138 192 -70 22 0 0 0 chr2 142014621 142014643 -111241940 + AT_rich Low_complexity Low_complexity 1 22 0 1605 141 116 14 chr2 142015595 142015872 -111240711 - AluJb SINE Alu -7 305 1 1480 220 16 67 chr2 142016073 142016564 -111240019 - MER31B LTR ERV1 0 543 1 2089 130 0 3 chr2 142016679 142016978 -111239605 - AluSx SINE Alu -14 298 1 1618 167 10 50 chr2 142016990 142017145 -111239438 - AluJb SINE Alu -24 288 149 2290 70 31 0 chr2 142017145 142017431 -111239152 - AluY SINE Alu -16 295 1 1618 167 10 50 chr2 142017431 142017575 -111239008 - AluJb SINE Alu -163 149 1 41 58 0 0 chr2 142017775 142017844 -111238739 + AT_rich Low_complexity Low_complexity 1 69 0 2353 83 13 10 chr2 142019023 142019335 -111237248 + AluSp SINE Alu 1 313 0 196 195 24 0 chr2 142019871 142019912 -111236671 - L3 LINE CR1 -1352 225 184 221 293 17 0 chr2 142020323 142020381 -111236202 + L3 LINE CR1 1519 1577 0 359 304 68 19 chr2 142023044 142023192 -111233391 + MIR SINE MIR 6 156 -54 2380 84 0 0 chr2 142023277 142023574 -111233009 - AluSq SINE Alu -16 297 1 2222 117 0 3 chr2 142023584 142023883 -111232700 - AluSx SINE Alu -14 298 1 425 237 169 21 chr2 142024018 142024254 -111232329 + L1ME4a LINE L1 5851 6121 0 2328 114 0 0 chr2 142024461 142024769 -111231814 + AluSx SINE Alu 1 308 -4 363 268 47 100 chr2 142025281 142025661 -111230922 + L1ME LINE L1 5309 5668 -453 1793 142 27 8 chr2 142026427 142026719 -111229864 - AluSx SINE Alu 0 314 18 2152 127 0 13 chr2 142027880 142028180 -111228403 + AluSx SINE Alu 1 296 -16 1635 156 164 32 chr2 142028232 142028562 -111228021 - MSTC LTR MaLR 0 428 40 2180 128 0 3 chr2 142028562 142028866 -111227717 - AluSx SINE Alu -9 303 1 1635 156 164 32 chr2 142028866 142028913 -111227670 - MSTC LTR MaLR -388 40 1 440 266 65 26 chr2 142028916 142029070 -111227513 + L1ME LINE L1 5502 5661 -460 1675 214 16 5 chr2 142029628 142029998 -111226585 + MER82 DNA MER2_type 2 375 -278 1002 191 12 0 chr2 142029999 142030172 -111226411 + FAM SINE Alu 1 175 0 12148 142 30 12 chr2 142030187 142033484 -111223099 + L1MA2 LINE L1 2778 6142 -162 1529 150 42 59 chr2 142033484 142033791 -111222792 + AluJo SINE Alu 8 309 -3 12148 142 30 12 chr2 142033791 142033952 -111222631 + L1MA2 LINE L1 6142 6299 -5 1079 232 15 57 chr2 142034010 142034273 -111222310 + MER82 DNA MER2_type 401 652 -1 244 165 51 38 chr2 142034297 142034376 -111222207 - L1MC5 LINE L1 -47 7914 7835 355 264 96 51 chr2 142034744 142034922 -111221661 + L1ME LINE L1 5307 5492 -629 2418 88 0 3 chr2 142034962 142035267 -111221316 + AluY SINE Alu 1 304 -7 1414 142 161 11 chr2 142035411 142035672 -111220911 + AluY SINE Alu 1 300 -11 1267 164 0 0 chr2 142035674 142035869 -111220714 + AluSg/x SINE Alu 108 302 -10 1065 120 67 43 chr2 142036553 142036761 -111219822 + MER46A DNA MER2_type 24 236 0 523 315 77 5 chr2 142037046 142037268 -111219315 - MIR SINE MIR -12 250 13 2289 112 0 6 chr2 142037762 142038076 -111218507 + AluSx SINE Alu 1 312 0 304 273 72 43 chr2 142038296 142038435 -111218148 + MIR SINE MIR 65 207 -55 684 198 165 22 chr2 142038570 142038752 -111217831 + MER3 DNA MER1_type 2 209 0 23 33 0 0 chr2 142039285 142039315 -111217268 + AT_rich Low_complexity Low_complexity 1 30 0 578 311 80 24 chr2 142039389 142039640 -111216943 + L2 LINE L2 2460 2724 -590 476 277 67 40 chr2 142039769 142040022 -111216561 + MLT1K LTR MaLR 223 482 -106 1373 118 72 9 chr2 142041297 142041518 -111215065 + MER46A DNA MER2_type 2 236 0 1628 156 16 0 chr2 142041575 142041825 -111214758 - AluJb SINE Alu -16 296 43 2025 125 3 7 chr2 142042213 142042516 -111214067 + AluSx SINE Alu 1 302 -10 257 218 89 59 chr2 142042706 142042807 -111213776 + MIR SINE MIR 25 128 -134 243 294 118 12 chr2 142046443 142046528 -111210055 - L2 LINE L2 -10 3262 3169 404 239 137 27 chr2 142046533 142046719 -111209864 - MLT1I LTR MaLR -140 269 64 892 297 70 48 chr2 142047068 142047455 -111209128 - HERV16 LTR ERVL -2414 2582 2205 2275 194 64 80 chr2 142047455 142047892 -111208691 + REP3 LTR ERV 3 445 -117 2194 104 7 13 chr2 142047892 142048201 -111208382 - AluSx SINE Alu -5 307 1 1548 134 0 0 chr2 142048201 142048418 -111208165 - AluJb SINE Alu -11 301 85 2275 194 64 80 chr2 142048418 142048545 -111208038 + REP3 LTR ERV 443 559 -3 892 297 70 48 chr2 142048545 142048655 -111207928 - HERV16 LTR ERVL -2791 2205 2074 916 123 7 7 chr2 142048733 142048871 -111207712 - AluJb SINE Alu -174 138 1 2263 202 58 78 chr2 142048872 142049574 -111207009 - HAL1 LINE L1 -1011 1496 815 2566 60 0 0 chr2 142049574 142049873 -111206710 + AluY SINE Alu 1 299 -12 2263 202 58 78 chr2 142049873 142050081 -111206502 - HAL1 LINE L1 -1692 815 604 662 243 10 20 chr2 142050296 142050498 -111206085 - HAL1 LINE L1 -2189 318 119 2133 142 0 7 chr2 142050656 142050965 -111205618 - AluSx SINE Alu -5 307 1 1231 260 80 27 chr2 142050974 142051386 -111205197 - L2 LINE L2 0 3313 2880 1069 201 46 8 chr2 142051473 142051736 -111204847 - L1MB2 LINE L1 -7 6164 5892 877 282 106 48 chr2 142051871 142052449 -111204134 - MLT1L LTR MaLR -4 611 1 233 298 170 0 chr2 142052450 142052544 -111204039 + MIR SINE MIR 78 147 -61 2855 24 0 0 chr2 142052544 142052875 -111203708 + L1PA4 LINE L1 5825 6155 0 959 110 17 64 chr2 142052944 142053000 -111203583 + MER5A DNA MER1_type 1 58 -131 2244 115 28 52 chr2 142053000 142053400 -111203183 + MLT1B LTR MaLR 1 390 0 959 110 17 64 chr2 142053400 142053516 -111203067 + MER5A DNA MER1_type 58 165 -24 793 244 34 19 chr2 142053583 142053788 -111202795 + MIR SINE MIR 54 261 -1 312 27 0 0 chr2 142055333 142055370 -111201213 + (TATG)n Simple_repeat Simple_repeat 4 40 0 2035 116 3 7 chr2 142055370 142055654 -111200929 - AluSx SINE Alu -29 283 1 1038 270 86 9 chr2 142055878 142056240 -111200343 + MLT1G1 LTR MaLR 1 346 -196 386 175 60 10 chr2 142056275 142056374 -111200209 + MLT1H LTR MaLR 448 549 0 372 276 0 0 chr2 142056554 142056652 -111199931 - MIR SINE MIR 0 262 165 560 246 94 18 chr2 142056790 142056961 -111199622 - MIR SINE MIR -77 185 2 797 209 0 47 chr2 142056988 142057160 -111199423 - FRAM SINE Alu -12 164 1 472 307 48 0 chr2 142057833 142057999 -111198584 + MIR SINE MIR 18 191 -71 2336 93 7 0 chr2 142059175 142059477 -111197106 - AluSp SINE Alu -9 304 1 429 196 216 34 chr2 142061047 142061195 -111195388 + MER5A DNA MER1_type 9 183 -6 819 284 222 16 chr2 142061264 142061455 -111195128 + L2 LINE L2 2804 2954 -359 1952 129 61 0 chr2 142061455 142061735 -111194848 + AluJb SINE Alu 1 297 -15 819 284 222 16 chr2 142061735 142061966 -111194617 + L2 LINE L2 2954 3313 0 888 214 0 0 chr2 142062103 142062262 -111194321 + MER5A DNA MER1_type 10 168 -21 287 242 32 89 chr2 142062304 142062428 -111194155 - MIR SINE MIR -41 221 105 559 229 26 46 chr2 142062456 142062609 -111193974 + MER5A DNA MER1_type 37 186 -3 25 0 0 0 chr2 142062937 142062962 -111193621 + AT_rich Low_complexity Low_complexity 1 25 0 1685 136 20 53 chr2 142062962 142063115 -111193468 - AluJo SINE Alu -21 291 151 2321 103 0 3 chr2 142063115 142063415 -111193168 - AluSx SINE Alu -13 299 1 1685 136 20 53 chr2 142063415 142063562 -111193021 - AluJo SINE Alu -161 151 1 432 333 78 30 chr2 142063604 142064001 -111192582 + L2 LINE L2 2228 2643 -671 2350 95 0 0 chr2 142064369 142064664 -111191919 - AluSx SINE Alu -17 295 1 226 297 27 36 chr2 142064775 142064886 -111191697 + L2 LINE L2 2918 3027 -245 533 174 174 55 chr2 142064892 142065174 -111191409 + MLT1H1 LTR MaLR 257 555 0 198 0 0 0 chr2 142065181 142065203 -111191380 + (T)n Simple_repeat Simple_repeat 1 22 0 303 294 85 39 chr2 142065287 142065440 -111191143 + MIR3 SINE MIR 42 201 -7 391 77 0 0 chr2 142066174 142066226 -111190357 - MADE1 DNA Mariner 0 80 29 292 265 44 73 chr2 142066301 142066505 -111190078 - L1MC4 LINE L1 -1 8041 7844 231 261 0 187 chr2 142067186 142067295 -111189288 + MER5A DNA MER1_type 3 58 -131 2918 47 6 0 chr2 142067295 142067634 -111188949 + L1PA8 LINE L1 5824 6164 -8 231 261 0 187 chr2 142067634 142067727 -111188856 + MER5A DNA MER1_type 58 167 -22 * 252 323 0 20 chr2 142067654 142067753 -111188830 - MER5A DNA MER1_type -85 104 8 1720 150 70 7 chr2 142067808 142068095 -111188488 - AluJo SINE Alu -7 305 1 1303 150 4 61 chr2 142068821 142069067 -111187516 + AluJo SINE Alu 62 293 -19 774 170 8 106 chr2 142069197 142069299 -111187284 - MER5A DNA MER1_type 0 189 119 2171 110 3 0 chr2 142069299 142069590 -111186993 - AluSx SINE Alu -20 292 1 774 170 8 106 chr2 142069590 142069696 -111186887 - MER5A DNA MER1_type -70 119 4 512 240 33 82 chr2 142069766 142069949 -111186634 + MER5B DNA MER1_type 3 176 -2 349 329 36 0 chr2 142071415 142071552 -111185031 + L1M4 LINE L1 5385 5526 -595 228 347 40 0 chr2 142071608 142071683 -111184900 + L1M4 LINE L1 5618 5695 -483 2379 103 3 0 chr2 142071740 142072052 -111184531 + AluSq SINE Alu 1 313 0 191 301 214 0 chr2 142072575 142072678 -111183905 + L2 LINE L2 3146 3270 -2 245 155 0 0 chr2 142073531 142073589 -111182994 - LTR66 LTR ERVL -159 451 394 217 286 24 0 chr2 142073595 142073679 -111182904 + (TATG)n Simple_repeat Simple_repeat 2 87 0 1902 149 10 0 chr2 142074811 142075107 -111181476 + AluJo SINE Alu 1 299 -13 1305 136 11 0 chr2 142075108 142075299 -111181284 + AluSg/x SINE Alu 108 300 -12 2229 88 3 17 chr2 142077363 142077659 -111178924 + AluSx SINE Alu 1 292 -20 442 191 0 0 chr2 142077821 142077889 -111178694 - AluJ/FLAM SINE Alu -243 69 2 828 150 24 0 chr2 142078596 142078723 -111177860 - FLAM_C SINE Alu -11 132 3 629 222 176 0 chr2 142079710 142079886 -111176697 + MIR SINE MIR 18 224 -38 301 301 82 39 chr2 142080073 142080279 -111176304 - L2 LINE L2 -1 3312 3098 460 204 189 8 chr2 142080906 142081038 -111175545 - MER5A DNA MER1_type -28 161 6 265 271 35 0 chr2 142081317 142081402 -111175181 + (TA)n Simple_repeat Simple_repeat 1 88 0 324 329 29 22 chr2 142081929 142082066 -111174517 - MIR3 SINE MIR -34 174 37 275 216 0 40 chr2 142082866 142082940 -111173643 + MIR SINE MIR 115 185 -77 2077 118 21 0 chr2 142083463 142083752 -111172831 - AluSx SINE Alu -17 295 1 1657 138 0 59 chr2 142083968 142084272 -111172311 - AluJo SINE Alu -16 296 11 1004 171 99 48 chr2 142085711 142085823 -111170760 + L1MD3 LINE L1 7731 7836 -159 1275 186 38 127 chr2 142085823 142086002 -111170581 - MER58B DNA MER1_type -2082 338 207 1614 129 31 66 chr2 142086002 142086289 -111170294 - AluJo SINE Alu -23 289 13 1275 186 38 127 chr2 142086289 142086480 -111170103 - MER58B DNA MER1_type -2213 207 1 1004 171 99 48 chr2 142086480 142086619 -111169964 + L1MD3 LINE L1 7836 7995 0 216 0 0 0 chr2 142086697 142086721 -111169862 + (TG)n Simple_repeat Simple_repeat 2 25 0 468 48 0 0 chr2 142087019 142087082 -111169501 + (CA)n Simple_repeat Simple_repeat 1 63 0 1408 180 3 25 chr2 142087299 142087583 -111169000 + L1MA10 LINE L1 6046 6323 -11 1763 158 0 60 chr2 142087920 142088085 -111168498 - AluJo SINE Alu -14 298 159 2238 111 0 0 chr2 142088085 142088373 -111168210 - AluSc SINE Alu -21 288 1 1763 158 0 60 chr2 142088373 142088524 -111168059 - AluJo SINE Alu -153 159 1 196 337 22 45 chr2 142088557 142088646 -111167937 - L2 LINE L2 0 3313 3227 1568 152 64 14 chr2 142088734 142089109 -111167474 + L1MA9 LINE L1 5886 6303 -9 358 293 34 34 chr2 142089135 142089282 -111167301 + MER5A DNA MER1_type 43 189 0 2404 70 3 3 chr2 142089407 142089708 -111166875 + AluY SINE Alu 1 301 -10 411 38 0 0 chr2 142090627 142090680 -111165903 + (CA)n Simple_repeat Simple_repeat 2 54 0 333 0 0 0 chr2 142090679 142090716 -111165867 + (GA)n Simple_repeat Simple_repeat 2 38 0 * 1215 190 9 18 chr2 142091081 142091302 -111165281 - MER20 DNA MER1_type 0 219 1 21 36 0 0 chr2 142092114 142092142 -111164441 + AT_rich Low_complexity Low_complexity 1 28 0 261 234 21 21 chr2 142093123 142093217 -111163366 + L1ME4a LINE L1 6006 6099 -22 305 217 0 33 chr2 142093885 142093945 -111162638 + L2 LINE L2 3215 3272 0 207 146 0 0 chr2 142144553 142144594 -111111989 + (TG)n Simple_repeat Simple_repeat 1 41 0 230 180 33 16 chr2 142144806 142144867 -111111716 + T-rich Low_complexity Low_complexity 5 66 0 1192 262 70 32 chr2 142145551 142145925 -111110658 + LTR16A LTR ERVL 17 404 -46 2773 265 43 26 chr2 142145983 142146097 -111110486 + HERV16 LTR ERVL 42 152 -4844 1874 137 13 13 chr2 142146097 142146404 -111110179 + AluJb SINE Alu 1 307 -5 2773 265 43 26 chr2 142146404 142148485 -111108098 + HERV16 LTR ERVL 152 2363 -2633 2320 66 0 0 chr2 142148486 142148772 -111107811 - AluY SINE Alu -25 286 1 357 198 77 11 chr2 142148992 142149083 -111107500 - L2 LINE L2 0 3313 3217 647 185 108 0 chr2 142149844 142149974 -111106609 + MER21B LTR ERV1 355 498 -365 304 286 46 80 chr2 142150371 142150546 -111106037 + L1ME4a LINE L1 5410 5578 -543 889 280 92 10 chr2 142150582 142150993 -111105590 + L1ME4a LINE L1 5675 6119 -2 413 300 128 28 chr2 142151216 142151396 -111105187 - MIR SINE MIR -37 225 28 201 94 0 0 chr2 142151805 142151837 -111104746 + (TG)n Simple_repeat Simple_repeat 1 32 0 309 51 0 0 chr2 142153108 142153147 -111103436 + (TG)n Simple_repeat Simple_repeat 2 40 0 520 246 93 51 chr2 142153349 142153482 -111103101 - MER102b DNA MER1_type -1122 306 159 2361 75 0 7 chr2 142153482 142153788 -111102795 - AluY SINE Alu -7 304 1 520 246 93 51 chr2 142153788 142153869 -111102714 - MER102b DNA MER1_type -1269 159 83 1630 147 23 30 chr2 142153968 142154268 -111102315 + AluJb SINE Alu 12 309 -3 368 259 30 37 chr2 142154741 142154876 -111101707 + MIR SINE MIR 129 262 0 263 355 108 16 chr2 142155122 142155308 -111101275 - L3 LINE CR1 -5 1572 1370 1939 130 0 30 chr2 142158142 142158441 -111098142 + AluSx SINE Alu 1 290 -22 208 358 0 28 chr2 142158778 142158887 -111097696 + CT-rich Low_complexity Low_complexity 1 106 0 373 245 61 66 chr2 142158888 142159100 -111097483 - L2 LINE L2 -1 3312 3102 334 341 92 42 chr2 142159282 142159663 -111096920 - L2 LINE L2 -495 2819 2420 423 0 0 0 chr2 142161289 142161336 -111095247 + (TG)n Simple_repeat Simple_repeat 2 48 0 2102 130 0 0 chr2 142161352 142161659 -111094924 + AluSx SINE Alu 1 307 -5 278 304 35 0 chr2 142161979 142162094 -111094489 - L3 LINE CR1 -24 1553 1435 352 282 8 38 chr2 142162102 142162233 -111094350 - MER5B DNA MER1_type -44 134 8 244 271 125 31 chr2 142162334 142162430 -111094153 - MIR SINE MIR -54 208 104 453 217 11 0 chr2 142162678 142162770 -111093813 + MIR SINE MIR 73 165 -97 1716 170 40 0 chr2 142163062 142163362 -111093221 - AluJo SINE Alu 0 312 1 1747 161 16 10 chr2 142164877 142165181 -111091402 - AluJo SINE Alu -4 308 3 273 243 93 9 chr2 142165317 142165424 -111091159 - L2 LINE L2 -1 3312 3197 319 284 90 32 chr2 142165869 142166024 -111090559 + MIR3 SINE MIR 27 190 -18 188 281 37 24 chr2 142167088 142167170 -111089413 - L2 LINE L2 -20 3293 3211 2446 162 89 17 chr2 142167452 142168075 -111088508 - MER39 LTR ERV1 0 707 1 1226 161 22 39 chr2 142168599 142168829 -111087754 - AluJo SINE Alu 0 312 87 452 155 12 24 chr2 142169198 142169282 -111087301 - Tigger5 DNA MER2_type -1 2322 2240 2094 219 23 5 chr2 142169297 142169695 -111086888 - Tigger5 DNA MER2_type -1918 405 1 1991 154 0 10 chr2 142170099 142170404 -111086179 - AluJb SINE Alu -10 302 1 223 281 18 0 chr2 142172857 142172914 -111083669 + (TAGA)n Simple_repeat Simple_repeat 3 60 0 301 315 46 0 chr2 142172924 142173032 -111083551 - L2 LINE L2 0 3313 3201 332 244 39 119 chr2 142173141 142173453 -111083130 - L1ME4a LINE L1 -129 5992 5706 2185 151 8 24 chr2 142173792 142174164 -111082419 - MER47A DNA MER2_type 0 366 1 7446 118 13 5 chr2 142174262 142174791 -111081792 - L1MA2 LINE L1 0 6304 5781 2236 143 25 6 chr2 142174791 142175148 -111081435 - THE1B LTR MaLR 0 364 1 7446 118 13 5 chr2 142175148 142176529 -111080054 - L1MA2 LINE L1 -523 5781 4377 1620 58 5 0 chr2 142176528 142176735 -111079848 - L1M1 LINE L1 -746 5559 5352 * 22 35 0 0 chr2 142176741 142176770 -111079813 + AT_rich Low_complexity Low_complexity 1 29 0 6166 169 34 15 chr2 142178713 142179957 -111076626 - L1M1 LINE L1 -937 5367 3211 2553 49 28 25 chr2 142179957 142180281 -111076302 - LTR17 LTR ERV1 -455 325 1 8472 41 9 0 chr2 142180281 142181259 -111075324 - HERV17 LTR ERV1 0 8626 7640 1423 81 22 5 chr2 142181245 142181430 -111075153 - HERV17 LTR ERV1 -3362 5264 5077 * 2211 241 112 46 chr2 142181430 142181518 -111075065 - L1M1 LINE L1 -167 2340 2259 1898 147 3 38 chr2 142181518 142181831 -111074752 - AluJb SINE Alu -10 302 1 2211 241 112 46 chr2 142181831 142182260 -111074323 - L1M1 LINE L1 -248 2259 1860 2211 111 0 25 chr2 142182260 142182576 -111074007 - AluSx SINE Alu -4 308 1 2211 241 112 46 chr2 142182576 142182669 -111073914 - L1M1 LINE L1 -647 1860 1775 1676 165 120 30 chr2 142182669 142183003 -111073580 - MLT1A1 LTR MaLR -1 364 1 2211 241 112 46 chr2 142183003 142183035 -111073548 - L1M1 LINE L1 -732 1775 1747 765 206 62 57 chr2 142183035 142183244 -111073339 + MER63A DNA MER1_type 1 210 0 2211 241 112 46 chr2 142183244 142183770 -111072813 - L1M1 LINE L1 -760 1747 1177 659 231 106 10 chr2 142184361 142184560 -111072023 - MIR SINE MIR 0 262 45 329 327 0 0 chr2 142185293 142185397 -111071186 - MIR3 SINE MIR -34 174 71 287 264 28 14 chr2 142186780 142186852 -111069731 - MIR3 SINE MIR -49 159 87 465 261 192 69 chr2 142188230 142188590 -111067993 + MLT1J LTR MaLR 80 483 -28 451 167 29 29 chr2 142189314 142189416 -111067167 + MER53 DNA DNA 5 106 -83 1810 176 54 25 chr2 142189534 142189887 -111066696 - MLT1A1 LTR MaLR -2 363 1 196 293 16 89 chr2 142189962 142190085 -111066498 + L2 LINE L2 3139 3252 -20 268 389 13 20 chr2 142190118 142190267 -111066316 + MIR3 SINE MIR 12 159 -49 1810 194 31 17 chr2 142190860 142191220 -111065363 - MLT1A1 LTR MaLR 0 365 1 189 351 86 7 chr2 142191800 142191951 -111064632 - L2 LINE L2 -226 3046 2884 680 247 24 0 chr2 142191992 142192162 -111064421 + MER117 DNA MER1_type 3 176 -21 261 308 122 29 chr2 142193638 142193810 -111062773 - MIR3 SINE MIR -16 192 5 665 217 56 6 chr2 142194077 142194200 -111062383 + MIR SINE MIR 76 210 -52 318 50 0 0 chr2 142194200 142194240 -111062343 + (CA)n Simple_repeat Simple_repeat 2 41 0 665 217 56 6 chr2 142194240 142194277 -111062306 + MIR SINE MIR 210 244 -18 338 216 45 0 chr2 142194899 142194987 -111061596 - MER5A DNA MER1_type -89 100 9 598 268 56 38 chr2 142194994 142195207 -111061376 + LTR16C LTR ERVL 275 491 0 271 248 30 59 chr2 142195362 142195463 -111061120 - MLT1J LTR MaLR -36 475 378 223 347 11 21 chr2 142196667 142196762 -111059821 + MIR SINE MIR 60 153 -109 325 121 52 0 chr2 142196772 142196830 -111059753 - MIR SINE MIR -16 246 186 269 259 0 0 chr2 142196856 142196914 -111059669 + MIR SINE MIR 186 243 -19 198 103 0 0 chr2 142197260 142197289 -111059294 + (A)n Simple_repeat Simple_repeat 1 29 0 1257 129 0 0 chr2 142198239 142198417 -111058166 - AluSg/x SINE Alu 0 312 135 2266 53 0 57 chr2 142198418 142198717 -111057866 - AluY SINE Alu -16 295 14 187 297 90 27 chr2 142198719 142198830 -111057753 - L2 LINE L2 -252 3020 2903 345 273 0 0 chr2 142200095 142200161 -111056422 + L2 LINE L2 3151 3216 -56 1277 247 82 19 chr2 142200253 142200630 -111055953 + MLT1H LTR MaLR 129 529 -20 1995 151 20 0 chr2 142200657 142200956 -111055627 + AluJo SINE Alu 5 309 -3 370 320 0 33 chr2 142201109 142201259 -111055324 + L2 LINE L2 3164 3308 -5 180 0 0 0 chr2 142201578 142201598 -111054985 + (CCA)n Simple_repeat Simple_repeat 1 20 0 198 0 0 0 chr2 142203734 142203756 -111052827 + (GGAAA)n Simple_repeat Simple_repeat 5 26 0 23 78 0 0 chr2 142203818 142203869 -111052714 + AT_rich Low_complexity Low_complexity 1 51 0 334 358 25 31 chr2 142204412 142204574 -111052009 - MER115 DNA AcHobo -247 446 286 513 330 17 11 chr2 142204698 142204874 -111051709 - MER115 DNA AcHobo -423 270 94 899 134 8 0 chr2 142206290 142206424 -111050159 + FRAM SINE Alu 1 135 -41 180 0 0 0 chr2 142206434 142206454 -111050129 + (TTTAA)n Simple_repeat Simple_repeat 2 21 0 2080 119 0 0 chr2 142206460 142206737 -111049846 - AluSg SINE Alu -24 286 10 832 263 86 15 chr2 142206888 142207227 -111049356 + L2 LINE L2 1987 2349 -965 424 261 18 9 chr2 142207360 142207471 -111049112 + MLT1J2 LTR MaLR 64 175 -275 380 222 33 0 chr2 142207568 142207658 -111048925 + MLT1J LTR MaLR 378 470 -41 691 311 104 49 chr2 142207703 142208377 -111048206 + L2 LINE L2 2392 3027 -245 264 30 0 0 chr2 142208377 142208410 -111048173 + (TG)n Simple_repeat Simple_repeat 2 34 0 691 311 104 49 chr2 142208410 142208423 -111048160 + L2 LINE L2 3027 3038 -234 1784 169 33 3 chr2 142208423 142208725 -111047858 - AluJo SINE Alu -1 311 1 691 311 104 49 chr2 142208725 142208855 -111047728 + L2 LINE L2 3038 3252 -20 1666 232 52 7 chr2 142208958 142209397 -111047186 - MLT1C LTR MaLR 0 467 9 205 186 23 0 chr2 142209517 142209560 -111047023 - MIR3 SINE MIR -1 207 164 325 330 97 46 chr2 142210452 142210803 -111045780 + L2 LINE L2 2592 2960 -354 232 258 191 0 chr2 142210981 142211070 -111045513 + L2 LINE L2 3175 3280 -33 483 326 49 22 chr2 142211545 142211729 -111044854 + LTR16B LTR ERVL 114 302 -162 382 183 192 0 chr2 142212044 142212148 -111044435 + L2 LINE L2 3190 3313 0 2324 144 2 49 chr2 142212253 142212491 -111044092 - MLT1B LTR MaLR 0 390 177 2633 55 0 3 chr2 142212491 142212802 -111043781 + AluY SINE Alu 1 310 -1 2324 144 2 49 chr2 142212802 142212972 -111043611 - MLT1B LTR MaLR -213 177 1 828 153 0 0 chr2 142213005 142213129 -111043454 - FLAM_A SINE Alu -9 124 1 226 161 36 18 chr2 142213163 142213219 -111043364 + A-rich Low_complexity Low_complexity 3 59 0 1919 135 16 20 chr2 142213576 142213879 -111042704 - AluSx SINE Alu -10 302 1 1888 186 30 0 chr2 142214622 142214955 -111041628 - MER7A DNA MER2_type -1 345 5 2004 119 0 33 chr2 142215201 142215503 -111041080 + AluSx SINE Alu 15 306 -6 689 281 70 52 chr2 142215819 142216303 -111040280 - L1ME LINE L1 -311 5810 5318 1577 191 52 34 chr2 142217363 142217688 -111038895 + MER58B DNA MER1_type 1 331 -10 334 208 0 52 chr2 142217692 142217769 -111038814 - L2 LINE L2 -47 3266 3194 180 293 13 27 chr2 142218560 142218635 -111037948 + L2 LINE L2 3197 3270 -2 1586 181 50 7 chr2 142218704 142218822 -111037761 + AluJb SINE Alu 1 112 -200 180 0 0 0 chr2 142218822 142218842 -111037741 + (CAAAA)n Simple_repeat Simple_repeat 5 24 0 1586 181 50 7 chr2 142218842 142219021 -111037562 + AluJb SINE Alu 112 311 -1 180 220 60 0 chr2 142219072 142219122 -111037461 - L2 LINE L2 0 3313 3261 759 250 103 22 chr2 142219336 142219568 -111037015 + MIR SINE MIR 12 262 0 187 296 0 14 chr2 142220394 142220465 -111036118 - L2 LINE L2 -78 3194 3125 2072 181 19 3 chr2 142220589 142220948 -111035635 - MLT1A1 LTR MaLR 0 365 1 1009 138 21 113 chr2 142221038 142221278 -111035305 - MER20 DNA MER1_type -1 218 1 529 338 22 13 chr2 142223575 142223800 -111032783 + MIR SINE MIR 13 239 -23 21 0 0 0 chr2 142224207 142224228 -111032355 + AT_rich Low_complexity Low_complexity 1 21 0 288 260 106 26 chr2 142227566 142227792 -111028791 - MLT1L LTR MaLR -331 284 12 1385 191 47 0 chr2 142227856 142228135 -111028448 + L1MC3 LINE L1 7472 7767 -18 2301 119 0 0 chr2 142228135 142228438 -111028145 - AluSg SINE Alu -7 303 1 1385 191 47 0 chr2 142228438 142228457 -111028126 + L1MC3 LINE L1 7767 7784 -1 939 343 36 8 chr2 142228475 142228834 -111027749 - LTR16A LTR ERVL -81 369 1 217 325 0 0 chr2 142229456 142229533 -111027050 + MIR3 SINE MIR 125 201 -7 755 305 54 41 chr2 142231113 142231500 -111025083 + MLT1L LTR MaLR 220 611 -4 293 257 10 40 chr2 142232761 142232862 -111023721 + MIR3 SINE MIR 106 203 -5 2178 134 3 0 chr2 142233159 142233464 -111023119 - AluSx SINE Alu -6 306 1 248 244 269 25 chr2 142233801 142234002 -111022581 - MIR SINE MIR -11 251 2 932 262 4 30 chr2 142234144 142234407 -111022176 - MIR SINE MIR 0 262 7 532 171 27 14 chr2 142234809 142234934 -111021649 + GA-rich Low_complexity Low_complexity 1 130 -18 1938 168 3 16 chr2 142234934 142235249 -111021334 + AluJo SINE Alu 1 311 -1 532 171 27 14 chr2 142235249 142235269 -111021314 + GA-rich Low_complexity Low_complexity 130 148 0 181 343 10 10 chr2 142235332 142235434 -111021149 - L2 LINE L2 -223 3049 2948 540 211 0 0 chr2 142235894 142235998 -111020585 + MIR SINE MIR 122 225 -37 1447 168 67 97 chr2 142237345 142237749 -111018834 - MSTD LTR MaLR -4 392 1 248 283 100 42 chr2 142238439 142238559 -111018024 + MIR SINE MIR 86 212 -50 2077 127 10 0 chr2 142239325 142239625 -111016958 - AluSq SINE Alu -5 308 6 209 346 56 37 chr2 142240667 142240774 -111015809 + L2 LINE L2 3122 3230 -42 2934 262 201 18 chr2 142241076 142241289 -111015294 + L2 LINE L2 1225 1398 -1915 2673 149 14 2 chr2 142241289 142241712 -111014871 + MSTA LTR MaLR 1 428 0 2934 262 201 18 chr2 142241712 142242668 -111013915 + L2 LINE L2 1398 2177 -1136 1790 167 7 10 chr2 142242668 142242956 -111013627 - AluJo SINE Alu -25 287 1 2934 262 201 18 chr2 142242956 142242985 -111013598 + L2 LINE L2 2177 2199 -1114 791 169 0 0 chr2 142242985 142243115 -111013468 + FLAM_A SINE Alu 1 130 -3 2934 262 201 18 chr2 142243115 142243510 -111013073 + L2 LINE L2 2199 2520 -793 369 0 0 0 chr2 142243510 142243551 -111013032 + (TG)n Simple_repeat Simple_repeat 2 42 0 2934 262 201 18 chr2 142243551 142243576 -111013007 + L2 LINE L2 2520 3156 -157 1940 225 63 16 chr2 142243580 142244069 -111012514 - LTR33 LTR ERVL -9 512 1 199 282 0 56 chr2 142244070 142244141 -111012442 + L2 LINE L2 3155 3221 -92 23 0 0 0 chr2 142244524 142244547 -111012036 + AT_rich Low_complexity Low_complexity 1 23 0 2075 179 5 16 chr2 142246497 142246866 -111009717 + MLT1A1 LTR MaLR 1 365 0 279 157 0 0 chr2 142247552 142247603 -111008980 + CT-rich Low_complexity Low_complexity 3 53 0 407 186 107 69 chr2 142249326 142249486 -111007097 - MER20B DNA MER1_type -5 214 46 22 35 0 0 chr2 142249694 142249723 -111006860 + AT_rich Low_complexity Low_complexity 1 29 0 2232 124 0 0 chr2 142249883 142250174 -111006409 + AluSg SINE Alu 1 291 -19 360 214 54 62 chr2 142250174 142250286 -111006297 + MIR SINE MIR 78 188 -74 3331 150 20 41 chr2 142250330 142250963 -111005620 + L1MB2 LINE L1 5552 6171 0 225 195 24 0 chr2 142251204 142251245 -111005338 - LTR67 LTR ERVL -7 550 509 966 194 8 33 chr2 142251250 142251454 -111005129 - MLT2D LTR ERVL -2 412 240 2257 177 26 37 chr2 142251473 142251903 -111004680 - LTR3 LTR ERVK -3 429 5 7168 101 16 0 chr2 142251907 142252872 -111003711 - HERVK3 LTR ERVK 0 7243 6264 4410 124 6 1 chr2 142252875 142253535 -111003048 - HERVK3 LTR ERVK -1896 5347 4685 1393 79 0 0 chr2 142253534 142253712 -111002871 - HERVK3 LTR ERVK -2936 4307 4130 * 18876 119 17 4 chr2 142253712 142256475 -111000108 - HERVK3 LTR ERVK -4445 2798 2 2326 169 27 15 chr2 142256496 142256904 -110999679 - LTR3 LTR ERVK -15 417 5 1138 218 28 8 chr2 142256914 142257166 -110999417 - MLT2D LTR ERVL -157 257 1 269 293 12 12 chr2 142257171 142257253 -110999330 - LTR67 LTR ERVL -52 505 424 329 304 39 96 chr2 142257379 142257609 -110998974 - LTR67 LTR ERVL -339 218 2 854 278 85 41 chr2 142258511 142258900 -110997683 + MLT1I LTR MaLR 1 406 -3 2025 172 31 16 chr2 142259350 142259734 -110996849 - MLT1B LTR MaLR 0 390 1 243 309 99 0 chr2 142259933 142260014 -110996569 + LTR67 LTR ERVL 329 417 -140 229 213 120 13 chr2 142260314 142260389 -110996194 + LTR67 LTR ERVL 472 554 -3 2276 104 0 3 chr2 142260514 142260811 -110995772 - AluSq SINE Alu -17 296 1 521 247 11 75 chr2 142260845 142261031 -110995552 - MLT1K LTR MaLR -22 566 393 506 297 117 22 chr2 142262283 142262505 -110994078 - MIR SINE MIR -18 244 2 2241 113 3 3 chr2 142262868 142263168 -110993415 + AluSg SINE Alu 2 301 -9 617 205 189 60 chr2 142263181 142263366 -110993217 - MER3 DNA MER1_type 0 209 1 1144 284 47 13 chr2 142263368 142263840 -110992743 + L2 LINE L2 1703 2190 -1124 670 296 126 43 chr2 142263928 142264095 -110992488 + L2 LINE L2 2814 2966 -347 2356 100 0 0 chr2 142264095 142264385 -110992198 - AluSc SINE Alu -19 290 1 670 296 126 43 chr2 142264385 142264660 -110991923 + L2 LINE L2 2966 3293 -20 222 265 98 29 chr2 142264966 142265068 -110991515 + MIR3 SINE MIR 84 192 -16 361 288 172 27 chr2 142265104 142265517 -110991066 + L1ME4a LINE L1 5555 6027 -94 363 171 0 14 chr2 142265659 142265729 -110990854 - L2 LINE L2 -4 3309 3241 236 217 145 0 chr2 142265893 142265962 -110990621 + MIR SINE MIR 70 148 -114 206 171 24 0 chr2 142266778 142266819 -110989764 + CT-rich Low_complexity Low_complexity 4 45 0 244 182 18 36 chr2 142266821 142266876 -110989707 - L2 LINE L2 0 3272 3219 4298 146 54 53 chr2 142266899 142268229 -110988354 - pTR5 LTR ERV1 0 2438 742 207 0 0 0 chr2 142268362 142268385 -110988198 + (T)n Simple_repeat Simple_repeat 1 23 0 1265 199 67 15 chr2 142268485 142268776 -110987807 - AluJb SINE Alu 0 305 1 441 179 57 9 chr2 142269500 142269606 -110986977 + L1ME4a LINE L1 5794 5904 -217 4469 108 9 6 chr2 142269635 142270282 -110986301 - MER39B LTR ERV1 -1 652 4 2623 194 39 76 chr2 142270293 142270881 -110985702 + MLT2B3 LTR ERVL 1 515 0 292 198 123 0 chr2 142271094 142271175 -110985408 + MER63 DNA MER1_type 649 739 -321 593 174 8 16 chr2 142271519 142271640 -110984943 - MER5A DNA MER1_type -69 120 1 3693 122 13 6 chr2 142271811 142272334 -110984249 - MER1A DNA MER1_type 0 527 1 211 303 0 26 chr2 142272591 142272667 -110983916 + C-rich Low_complexity Low_complexity 5 78 0 1587 215 65 38 chr2 142272722 142273169 -110983414 - Charlie4a DNA MER1_type -33 475 17 290 152 51 51 chr2 142274677 142274756 -110981827 + MIR SINE MIR 103 181 -81 223 259 0 19 chr2 142275829 142275883 -110980700 + (CA)n Simple_repeat Simple_repeat 2 54 0 2321 96 0 3 chr2 142276428 142276719 -110979864 + AluSg SINE Alu 1 290 -20 35 0 0 40 chr2 142277778 142277811 -110978772 + AT_rich Low_complexity Low_complexity 1 33 -15 3287 119 14 4 chr2 142277811 142278317 -110978266 - L1PA16 LINE L1 0 6166 5656 35 0 0 40 chr2 142278317 142278333 -110978250 + AT_rich Low_complexity Low_complexity 33 48 0 877 143 121 22 chr2 142278333 142278515 -110978068 + L1MB5 LINE L1 5725 5924 -260 7156 58 10 2 chr2 142278515 142279545 -110977038 + L1PA8 LINE L1 5130 6168 -4 1142 188 4 41 chr2 142279545 142279786 -110976797 + L1MB5 LINE L1 5928 6163 -11 311 321 12 43 chr2 142280349 142280511 -110976072 + MER5A DNA MER1_type 32 188 -1 1884 107 110 0 chr2 142281489 142281752 -110974831 - AluSc SINE Alu -17 292 1 206 329 0 14 chr2 142281859 142281932 -110974651 + L2 LINE L2 3242 3313 0 2046 208 112 82 chr2 142281953 142282676 -110973907 + LTR1B LTR ERV1 1 745 -81 395 292 130 22 chr2 142283331 142283516 -110973067 + MIR SINE MIR 9 213 -49 2995 144 174 8 chr2 142284556 142285159 -110971424 + MER39 LTR ERV1 4 706 -1 2408 99 0 0 chr2 142285334 142285638 -110970945 - AluSg SINE Alu -6 304 1 550 99 0 12 chr2 142285671 142285752 -110970831 - MADE1 DNA Mariner 0 80 1 340 273 7 7 chr2 142286095 142286234 -110970349 + G-rich Low_complexity Low_complexity 4 142 0 26 0 0 0 chr2 142286888 142286914 -110969669 + AT_rich Low_complexity Low_complexity 1 26 0 613 207 185 31 chr2 142287043 142287265 -110969318 - MER112 DNA MER1_type 0 260 5 257 333 0 0 chr2 142287265 142287346 -110969237 - MIR SINE MIR -55 153 73 198 0 0 0 chr2 142287617 142287639 -110968944 + (A)n Simple_repeat Simple_repeat 1 22 0 188 271 0 43 chr2 142287726 142287796 -110968787 - MIR SINE MIR -24 238 172 1487 192 116 33 chr2 142287875 142288297 -110968286 + MSTB2 LTR MaLR 1 457 0 196 225 0 0 chr2 142288303 142288343 -110968240 - MIR SINE MIR -210 52 13 688 296 95 14 chr2 142289944 142290340 -110966243 - MLT1L LTR MaLR -11 604 110 235 265 15 44 chr2 142290297 142290365 -110966218 - LTR67 LTR ERVL -400 157 92 * 336 250 197 62 chr2 142290645 142290790 -110965793 - L1MA9 LINE L1 -38 6274 6150 1797 93 119 4 chr2 142290790 142291059 -110965524 + AluSq SINE Alu 1 300 -13 336 250 197 62 chr2 142291059 142291157 -110965426 - L1MA9 LINE L1 -162 6150 5998 2247 122 3 0 chr2 142291548 142291860 -110964723 - AluSq SINE Alu 0 313 1 198 217 193 0 chr2 142292748 142292831 -110963752 - MIR SINE MIR -44 218 120 475 286 45 7 chr2 142293558 142293712 -110962871 - MIR SINE MIR -75 187 28 2306 103 3 0 chr2 142295896 142296206 -110960377 + AluSq SINE Alu 1 311 -2 1592 171 39 46 chr2 142296213 142296518 -110960065 + AluJo SINE Alu 1 303 -9 354 253 12 40 chr2 142296852 142296988 -110959595 - MIR SINE MIR -41 167 34 423 0 0 0 chr2 142297018 142297065 -110959518 + (CA)n Simple_repeat Simple_repeat 2 48 0 198 0 0 0 chr2 142297074 142297096 -110959487 + (A)n Simple_repeat Simple_repeat 1 22 0 882 209 0 0 chr2 142297136 142297294 -110959289 + FRAM SINE Alu 4 161 -15 318 259 54 61 chr2 142297296 142297443 -110959140 - MIR SINE MIR -4 258 113 215 280 97 54 chr2 142297449 142297542 -110959041 + L2 LINE L2 3163 3259 -13 214 274 20 0 chr2 142297611 142297662 -110958921 + L2 LINE L2 3188 3239 -33 31 0 0 0 chr2 142297680 142297711 -110958872 + AT_rich Low_complexity Low_complexity 1 31 0 883 275 105 79 chr2 142297790 142298004 -110958579 - MLT1K LTR MaLR -2 586 379 2288 100 6 10 chr2 142298004 142298315 -110958268 - AluSg SINE Alu 0 310 1 883 275 105 79 chr2 142298315 142298671 -110957912 - MLT1K LTR MaLR -209 379 1 515 270 42 54 chr2 142299627 142299868 -110956715 + MER102b DNA MER1_type 104 341 0 221 306 0 0 chr2 142299871 142299933 -110956650 - MIR3 SINE MIR -53 155 94 1146 240 94 20 chr2 142300009 142300402 -110956181 - L1MD2 LINE L1 0 6164 5771 282 56 0 0 chr2 142300403 142300439 -110956144 + (GGAA)n Simple_repeat Simple_repeat 3 38 0 296 200 0 0 chr2 142300446 142300496 -110956087 + MER63 DNA MER1_type 689 738 -322 1321 234 78 3 chr2 142300538 142300884 -110955699 - MER63 DNA MER1_type 0 1062 691 462 132 0 0 chr2 142300890 142300966 -110955617 + (TCCC)n Simple_repeat Simple_repeat 4 79 0 2635 130 58 12 chr2 142301343 142301775 -110954808 + LTR47A LTR ERVL 1 452 0 602 286 39 52 chr2 142302137 142302445 -110954138 + L2 LINE L2 2625 2928 -386 825 93 0 17 chr2 142302556 142302674 -110953909 + FRAM SINE Alu 60 175 -1 2612 147 22 16 chr2 142302756 142303206 -110953377 + L1MA5 LINE L1 5843 6295 -5 22 0 0 0 chr2 142303238 142303260 -110953323 + AT_rich Low_complexity Low_complexity 1 22 0 288 236 102 8 chr2 142303280 142303407 -110953176 - L1ME4a LINE L1 -17 6104 5966 881 138 39 0 chr2 142303422 142303552 -110953031 - AluJo SINE Alu -177 135 1 272 273 115 14 chr2 142303591 142303730 -110952853 - HAL1 LINE L1 0 2507 2355 * 6073 86 20 63 chr2 142303729 142304454 -110952129 - L1MA2 LINE L1 0 6304 5549 1875 171 0 9 chr2 142304454 142304769 -110951814 - AluJb SINE Alu 0 312 1 6073 86 20 63 chr2 142304769 142304909 -110951674 - L1MA2 LINE L1 -755 5549 5483 2508 61 0 0 chr2 142304909 142305203 -110951380 - AluY SINE Alu -17 294 1 6073 86 20 63 chr2 142305203 142305316 -110951267 - L1MA2 LINE L1 -821 5483 5367 5295 245 105 30 chr2 142305392 142307223 -110949360 - HAL1 LINE L1 -213 2294 257 258 32 0 0 chr2 142307223 142307254 -110949329 + (CA)n Simple_repeat Simple_repeat 1 31 0 5295 245 105 30 chr2 142307254 142307532 -110949051 - HAL1 LINE L1 -2250 257 1 546 215 47 40 chr2 142307541 142307690 -110948893 + L2 LINE L2 3123 3272 0 213 279 89 44 chr2 142308522 142308680 -110947903 - L2 LINE L2 -119 3194 3030 254 324 44 78 chr2 142308702 142308998 -110947585 + MLT1K LTR MaLR 20 305 -283 267 301 19 29 chr2 142309033 142309136 -110947447 + MLT1K LTR MaLR 470 571 -17 2333 75 3 0 chr2 142309166 142309459 -110947124 - AluY SINE Alu -17 294 1 380 299 147 41 chr2 142309459 142309882 -110946701 - L2 LINE L2 -237 3035 2565 2155 126 0 0 chr2 142310181 142310490 -110946093 + AluSx SINE Alu 1 309 -3 494 242 32 84 chr2 142310847 142311003 -110945580 + MLT1J2 LTR MaLR 250 394 -15 388 174 22 11 chr2 142311178 142311270 -110945313 + GA-rich Low_complexity Low_complexity 1 93 0 374 283 0 18 chr2 142311449 142311562 -110945021 + MIR3 SINE MIR 91 201 -7 375 134 12 73 chr2 142312626 142312708 -110943875 - L1MB8 LINE L1 -9 6169 6093 591 139 22 44 chr2 142312719 142312856 -110943727 - L1MB3 LINE L1 0 6183 6050 1185 284 69 43 chr2 142313136 142313555 -110943028 - LTR16A LTR ERVL -14 436 7 2999 331 64 16 chr2 142314221 142315715 -110940868 - ERVL LTR ERVL -1576 4188 2624 449 303 37 12 chr2 142516092 142516254 -110740329 - MIR SINE MIR -48 214 49 926 136 0 7 chr2 142516882 142517022 -110739561 - AluSq/x SINE Alu -173 139 1 2434 158 42 7 chr2 142517022 142517595 -110738988 - L1MB5 LINE L1 -32 6142 5433 29 28 0 0 chr2 142518960 142518996 -110737587 + AT_rich Low_complexity Low_complexity 1 36 0 488 207 12 23 chr2 142519393 142519511 -110737072 + MSTC LTR MaLR 1 116 -249 359 164 0 136 chr2 142519526 142519666 -110736917 + MLT1A1 LTR MaLR 69 189 -176 720 232 24 6 chr2 142519696 142519860 -110736723 + MLT1A1 LTR MaLR 199 365 0 * 1527 164 42 55 chr2 142519860 142520167 -110736416 + MLT1B LTR MaLR 88 390 0 214 315 146 0 chr2 142520266 142520355 -110736228 + L2 LINE L2 3175 3276 -37 189 74 0 0 chr2 142520377 142520404 -110736179 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 502 176 109 42 chr2 142521404 142521523 -110735060 - ORSL DNA AcHobo 0 275 149 1170 196 42 0 chr2 142521530 142521790 -110734793 + L1MB7 LINE L1 5910 6180 -4 474 247 68 63 chr2 142521931 142522121 -110734462 + MER117 DNA MER1_type 7 197 0 226 302 78 70 chr2 142523272 142523401 -110733182 - L2 LINE L2 0 3272 3143 1838 202 75 59 chr2 142523910 142524404 -110732179 - MLT1D LTR MaLR -2 503 2 321 256 229 12 chr2 142524707 142524884 -110731699 - MIR SINE MIR -32 230 24 2217 106 0 0 chr2 142524921 142525204 -110731379 + AluSx SINE Alu 1 283 -29 411 303 58 19 chr2 142525211 142525366 -110731217 + MER5B DNA MER1_type 18 178 0 635 196 0 0 chr2 142526531 142526643 -110729940 + FRAM SINE Alu 55 166 -10 338 335 30 0 chr2 142526706 142526870 -110729713 - L1M4 LINE L1 -1250 4896 4728 * 4211 170 67 10 chr2 142526859 142527676 -110728907 - L1MB7 LINE L1 0 6184 5321 305 242 91 8 chr2 142527676 142527808 -110728775 - L1M4 LINE L1 -1403 4743 4601 241 336 16 8 chr2 142527892 142528014 -110728569 + MLT1J LTR MaLR 387 509 -2 251 286 133 10 chr2 142528071 142528274 -110728309 - L1M4 LINE L1 -1686 4460 4233 334 330 73 34 chr2 142528313 142528476 -110728107 - L1M4 LINE L1 -1954 4192 4037 2015 136 0 24 chr2 142528476 142528770 -110727813 - AluSg SINE Alu -23 287 1 334 330 73 34 chr2 142528770 142528813 -110727770 - L1M4 LINE L1 -2109 4037 3997 2156 76 40 0 chr2 142528813 142529088 -110727495 - AluY SINE Alu -9 302 17 334 330 73 34 chr2 142529088 142529113 -110727470 - L1M4 LINE L1 -2149 3997 3951 364 213 13 13 chr2 142529124 142529199 -110727384 + L1MA8 LINE L1 2 76 -6205 * 10929 193 74 18 chr2 142529196 142532812 -110723771 + L1MA8 LINE L1 2678 6485 -10 634 259 99 88 chr2 142532826 142534014 -110722569 - L1M4 LINE L1 -2197 3949 2749 396 236 27 0 chr2 142534202 142534312 -110722271 - L1MEd LINE L1 -5317 802 690 942 261 131 57 chr2 142534354 142534920 -110721663 - L1MEd LINE L1 -5509 610 3 2187 114 3 0 chr2 142535189 142535487 -110721096 - AluSq SINE Alu -14 299 1 190 349 96 0 chr2 142535948 142536031 -110720552 - L2 LINE L2 -27 3245 3155 3204 185 41 20 chr2 142536070 142536954 -110719629 + L1ME1 LINE L1 5112 6001 -165 711 204 19 12 chr2 142536962 142537124 -110719459 + L1MA10 LINE L1 6170 6332 -2 252 143 0 0 chr2 142537416 142537458 -110719125 + (GGAGA)n Simple_repeat Simple_repeat 5 46 0 1012 265 204 32 chr2 142537903 142538461 -110718122 + MLT2F LTR ERVL 10 663 0 180 365 10 0 chr2 142538810 142538906 -110717677 - L3b LINE CR1 -332 1251 1155 1472 188 20 33 chr2 142539076 142539379 -110717204 - AluJo SINE Alu -13 299 1 982 157 99 0 chr2 142541095 142541267 -110715316 + MER5A DNA MER1_type 1 189 0 439 239 0 0 chr2 142541445 142541537 -110715046 - MER5A DNA MER1_type -93 96 5 1982 128 7 7 chr2 142542318 142542606 -110713977 - AluJb SINE Alu -24 288 1 2226 130 0 7 chr2 142542726 142543034 -110713549 - AluSp SINE Alu -7 306 1 402 260 122 28 chr2 142543698 142543879 -110712704 + MIR SINE MIR 47 244 -18 288 254 53 35 chr2 142543935 142544049 -110712534 + MIR SINE MIR 78 193 -69 416 283 124 0 chr2 142544456 142544569 -110712014 - L2 LINE L2 -9 3263 3137 205 260 68 27 chr2 142545434 142545507 -110711076 + MIR SINE MIR 78 153 -109 228 314 0 29 chr2 142545512 142545582 -110711001 - L2 LINE L2 -10 3262 3195 684 270 64 34 chr2 142548086 142548496 -110708087 + MLT1L LTR MaLR 167 615 0 237 154 0 0 chr2 142548519 142548558 -110708025 + MER117 DNA MER1_type 106 144 -53 1941 150 0 0 chr2 142550500 142550793 -110705790 - AluSx SINE Alu -19 293 1 567 101 0 0 chr2 142550964 142551033 -110705550 - AluJ/FLAM SINE Alu -242 70 2 2181 89 4 4 chr2 142551698 142552004 -110704579 + AluSp SINE Alu 2 307 0 1011 125 7 0 chr2 142552013 142552157 -110704426 + AluSc SINE Alu 143 287 -22 218 200 200 0 chr2 142552163 142552223 -110704360 - L2 LINE L2 -12 3301 3230 316 130 0 0 chr2 142552572 142552618 -110703965 - L1P5 LINE L1 -447 5704 5659 1981 123 10 10 chr2 142552628 142552930 -110703653 - AluSx SINE Alu -10 302 1 328 250 269 6 chr2 142552931 142553087 -110703496 - L2 LINE L2 -954 2360 2164 1219 218 162 61 chr2 142553089 142553445 -110703138 - L2 LINE L2 -1258 2056 1737 2030 113 14 14 chr2 142553445 142553738 -110702845 - AluSx SINE Alu -19 293 1 1219 218 162 61 chr2 142553738 142554066 -110702517 - L2 LINE L2 -1577 1737 1303 857 168 103 139 chr2 142554244 142554661 -110701922 + LTR7 LTR ERV1 49 450 0 1866 151 3 3 chr2 142556778 142557070 -110699513 - AluSp SINE Alu -21 292 1 22 42 0 0 chr2 142558956 142558980 -110697603 + AT_rich Low_complexity Low_complexity 1 24 0 777 154 47 35 chr2 142558990 142559159 -110697424 + AluSg SINE Alu 5 175 -135 521 249 54 54 chr2 142560219 142560248 -110696335 - AluJo SINE Alu -7 305 277 1558 186 24 0 chr2 142560248 142560539 -110696044 - AluSx SINE Alu -14 298 1 186 43 0 0 chr2 142560539 142560562 -110696021 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 521 249 54 54 chr2 142560562 142560772 -110695811 - AluJo SINE Alu -33 279 65 704 162 17 0 chr2 142562444 142562561 -110694022 - MER41E LTR ERV1 -393 119 1 236 264 97 0 chr2 142564012 142564084 -110692499 + MIR SINE MIR 86 164 -98 355 367 0 0 chr2 142564565 142564663 -110691920 + L2 LINE L2 3154 3251 -21 189 175 0 0 chr2 142564676 142564716 -110691867 + (TA)n Simple_repeat Simple_repeat 1 40 0 391 356 0 12 chr2 142565700 142565860 -110690723 + MER5B DNA MER1_type 1 158 -20 473 252 157 31 chr2 142567428 142567714 -110688869 - L1ME4a LINE L1 -11 6110 5789 342 260 10 10 chr2 142567767 142567863 -110688720 - L1ME4a LINE L1 -315 5806 5711 241 164 269 0 chr2 142567878 142567945 -110688638 + L2 LINE L2 3225 3309 -4 432 281 75 66 chr2 142567986 142568237 -110688346 - L1ME4a LINE L1 -425 5696 5440 2095 121 0 3 chr2 142568237 142568534 -110688049 + AluSx SINE Alu 1 296 -16 432 281 75 66 chr2 142568534 142568616 -110687967 - L1ME4a LINE L1 -681 5440 5360 1719 239 124 6 chr2 142569622 142570170 -110686413 - MLT1E2 LTR MaLR -3 623 11 246 244 12 23 chr2 142571406 142571492 -110685091 + CT-rich Low_complexity Low_complexity 2 86 0 207 364 8 8 chr2 142571883 142572004 -110684579 + (TTG)n Simple_repeat Simple_repeat 2 122 0 405 0 0 0 chr2 142572864 142572909 -110683674 + (CA)n Simple_repeat Simple_repeat 2 46 0 1054 262 38 31 chr2 142575997 142576287 -110680296 - AluJo SINE Alu -10 292 1 1999 113 11 3 chr2 142577834 142578117 -110678466 - AluSq SINE Alu -20 293 9 1055 285 32 6 chr2 142579323 142579639 -110676944 - L1MB5 LINE L1 -13 6161 5838 1253 205 111 18 chr2 142579711 142580106 -110676477 - L1MB5 LINE L1 -495 5685 5254 225 154 0 0 chr2 142580942 142580981 -110675602 + A-rich Low_complexity Low_complexity 1 39 0 216 0 0 0 chr2 142582351 142582375 -110674208 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 9568 152 17 4 chr2 142583248 142584850 -110671733 + HERVK22 LTR ERVK 3151 4773 -2064 3174 172 20 41 chr2 142584849 142585587 -110670996 + pTR5 LTR ERV1 742 1464 -974 * 689 338 54 37 chr2 142585860 142586321 -110670262 - L1M3b LINE L1 -5771 510 42 1652 176 0 43 chr2 142586395 142586718 -110669865 + AluSc SINE Alu 1 309 0 1763 206 37 46 chr2 142586930 142587362 -110669221 - MSTB1 LTR MaLR -1 431 4 884 133 0 0 chr2 142587701 142587821 -110668762 + AluSq/x SINE Alu 1 120 -192 273 244 134 37 chr2 142587925 142588007 -110668576 + L2 LINE L2 3204 3293 -20 3412 110 16 48 chr2 142588136 142588770 -110667813 - MER4B LTR ERV1 0 779 1 24 0 0 0 chr2 142589519 142589543 -110667040 + AT_rich Low_complexity Low_complexity 1 24 0 339 304 35 9 chr2 142589652 142589767 -110666816 + MIR SINE MIR 36 153 -55 186 293 24 0 chr2 142589830 142589871 -110666712 - L2 LINE L2 -38 3275 3234 623 218 113 0 chr2 142590451 142590593 -110665990 - MER5A DNA MER1_type -1 188 31 520 184 16 0 chr2 142590809 142590910 -110665673 + MER5A DNA MER1_type 4 106 -83 228 316 51 0 chr2 142591324 142591403 -110665180 + MIR SINE MIR 61 143 -119 2155 119 37 48 chr2 142591605 142591982 -110664601 - L1MB8 LINE L1 -6 6172 5800 993 140 18 0 chr2 142592015 142592179 -110664404 - L1MB8 LINE L1 -1114 5032 4866 1967 177 0 0 chr2 142592189 142592500 -110664083 - AluSq SINE Alu -2 311 1 330 234 339 8 chr2 142592519 142592643 -110663940 - MER5B DNA MER1_type -11 167 3 985 211 16 11 chr2 142592655 142592840 -110663743 + MER5A DNA MER1_type 4 189 0 360 275 108 76 chr2 142593870 142594121 -110662462 - MLT1K LTR MaLR -166 422 164 4548 46 0 0 chr2 142594144 142594663 -110661920 - L1PA4 LINE L1 0 6155 5637 2153 138 0 0 chr2 142594670 142594982 -110661601 - AluSx SINE Alu 0 312 1 2507 222 92 44 chr2 142595072 142595144 -110661439 + MER21B LTR ERV1 9 76 -787 1479 134 169 11 chr2 142595144 142595405 -110661178 - AluSx SINE Alu -10 302 1 2507 222 92 44 chr2 142595405 142596030 -110660553 + MER21B LTR ERV1 76 739 -124 605 266 113 43 chr2 142596333 142596845 -110659738 + L1ME4a LINE L1 5534 6081 -40 285 264 128 0 chr2 142598069 142598217 -110658366 - L1M4 LINE L1 -1201 4945 4779 610 272 35 12 chr2 142598353 142598526 -110658057 - MIR SINE MIR -78 184 8 441 297 82 28 chr2 142598568 142598750 -110657833 - MIR SINE MIR -2 260 69 204 291 209 64 chr2 142599522 142599928 -110656655 + L2 LINE L2 2807 3271 -1 24 77 0 0 chr2 142601439 142601491 -110655092 + AT_rich Low_complexity Low_complexity 1 52 0 189 0 0 0 chr2 142601547 142601568 -110655015 + (T)n Simple_repeat Simple_repeat 1 21 0 584 205 79 0 chr2 142601663 142601790 -110654793 - L1MB7 LINE L1 0 6184 6048 230 308 57 88 chr2 142601974 142602133 -110654450 + L2 LINE L2 3012 3165 -107 239 266 92 43 chr2 142602324 142602508 -110654075 + MIR3 SINE MIR 10 202 -6 2955 154 25 2 chr2 142604410 142604885 -110651698 - L1MB2 LINE L1 -7 6164 5679 1623 146 13 53 chr2 142604890 142605192 -110651391 - AluJb SINE Alu -18 294 5 357 303 55 9 chr2 142605246 142605355 -110651228 + MER5B DNA MER1_type 1 114 -64 281 230 167 16 chr2 142605385 142605511 -110651072 + MER5A DNA MER1_type 32 176 -13 184 277 0 21 chr2 142605660 142605707 -110650876 - MIR3 SINE MIR -3 205 160 363 326 39 3 chr2 142606172 142606367 -110650216 - MIR SINE MIR -1 261 11 201 156 0 0 chr2 142606449 142606481 -110650102 + (CAT)n Simple_repeat Simple_repeat 2 33 0 1073 217 70 0 chr2 142606484 142606728 -110649855 - MIR SINE MIR 0 262 2 611 201 32 32 chr2 142607163 142607317 -110649266 + Charlie7 DNA MER1_type 564 717 -1895 309 211 84 89 chr2 142607318 142607508 -110649075 + Charlie7 DNA MER1_type 2423 2611 -1 256 300 143 36 chr2 142607509 142607649 -110648934 - MIR3 SINE MIR -48 160 6 532 203 14 56 chr2 142607751 142607894 -110648689 + MIR SINE MIR 22 158 -104 586 291 36 42 chr2 142608174 142608483 -110648100 - MER113 DNA MER1_type? -211 310 4 330 234 78 16 chr2 142608502 142608630 -110647953 - Charlie2a DNA MER1_type 0 2862 2727 702 223 65 46 chr2 142608653 142608913 -110647670 - L1MC4 LINE L1 -15 8027 7763 2767 229 123 45 chr2 142608915 142610085 -110646498 - Charlie2a DNA MER1_type -117 2745 1485 445 309 101 56 chr2 142610290 142610717 -110645866 - Charlie2a DNA MER1_type -2306 476 31 267 193 0 0 chr2 142611060 142611117 -110645466 + L1MA8 LINE L1 6230 6286 -5 2315 75 0 0 chr2 142611724 142612037 -110644546 - AluY SINE Alu 0 313 1 491 237 79 7 chr2 142612073 142612212 -110644371 + MER102a DNA MER1_type 181 329 -1 645 243 117 54 chr2 142612293 142612449 -110644134 - L2 LINE L2 -90 3223 3078 1908 114 50 11 chr2 142612449 142612730 -110643853 + AluSx SINE Alu 1 292 -20 645 243 117 54 chr2 142612730 142612906 -110643677 - L2 LINE L2 -235 3078 2870 356 304 26 0 chr2 142612915 142613030 -110643553 + MIR3 SINE MIR 81 198 -10 1335 155 111 143 chr2 142613938 142614352 -110642231 - LTR40b LTR ERVL -2 460 60 26 64 0 0 chr2 142615082 142615129 -110641454 + AT_rich Low_complexity Low_complexity 1 47 0 946 125 65 0 chr2 142615129 142615297 -110641286 - L1MA8 LINE L1 -1 6290 6112 430 298 27 74 chr2 142615423 142615681 -110640902 + MLT1J LTR MaLR 226 471 -40 259 233 55 14 chr2 142615753 142615826 -110640757 - LTR67 LTR ERVL 0 557 482 276 276 31 87 chr2 142616977 142617058 -110639525 + L2 LINE L2 2721 2805 -509 1918 128 14 7 chr2 142617058 142617347 -110639236 - AluSg SINE Alu -16 294 4 276 276 31 87 chr2 142617347 142617519 -110639064 + L2 LINE L2 2805 2960 -354 318 311 22 7 chr2 142617562 142617697 -110638886 + MIR SINE MIR 43 179 -83 186 152 30 0 chr2 142617934 142617967 -110638616 - MER5A DNA MER1_type -21 168 135 2674 145 82 4 chr2 142617976 142618501 -110638082 + L1MB2 LINE L1 5603 6168 -3 253 234 138 0 chr2 142618516 142618610 -110637973 - MER5B DNA MER1_type -45 133 27 2195 88 0 50 chr2 142618636 142618953 -110637630 + AluSq SINE Alu 1 301 -12 210 130 0 43 chr2 142619532 142619578 -110637005 + (TTTTTG)n Simple_repeat Simple_repeat 1 44 0 223 319 81 6 chr2 142619957 142620117 -110636466 + MIR SINE MIR 20 191 -71 432 270 104 30 chr2 142620447 142620677 -110635906 + MER102b DNA MER1_type 87 333 -8 622 266 6 0 chr2 142621769 142621927 -110634656 + MER5B DNA MER1_type 20 178 0 245 224 15 30 chr2 142622438 142622505 -110634078 - L2 LINE L2 -3 3269 3204 376 198 44 126 chr2 142623133 142623315 -110633268 - L1ME4a LINE L1 -2 6119 5953 180 255 21 0 chr2 142623454 142623501 -110633082 - MIR SINE MIR -63 145 98 2287 85 3 7 chr2 142623527 142623820 -110632763 - AluSx SINE Alu -20 292 1 6485 190 23 94 chr2 142624217 142626699 -110629884 - L1MC1 LINE L1 0 6333 4044 351 116 52 44 chr2 142626814 142627067 -110629516 + (TA)n Simple_repeat Simple_repeat 1 255 0 1535 177 0 81 chr2 142627076 142627386 -110629197 - MLT2B3 LTR ERVL -35 519 235 195 42 0 0 chr2 142627421 142627445 -110629138 + (GA)n Simple_repeat Simple_repeat 2 25 0 1104 219 22 5 chr2 142627446 142627670 -110628913 - MLT2D LTR ERVL -325 228 1 313 290 10 10 chr2 142627670 142627770 -110628813 - L2 LINE L2 -27 3286 3187 2538 117 21 5 chr2 142627800 142628184 -110628399 - MLT1B LTR MaLR 0 390 1 21 36 0 0 chr2 142628479 142628507 -110628076 + AT_rich Low_complexity Low_complexity 1 28 0 312 284 23 0 chr2 142628520 142628608 -110627975 - L1MC4 LINE L1 -1339 6703 6614 294 256 0 0 chr2 142628616 142628706 -110627877 + L1MC4 LINE L1 6614 6703 -1339 270 267 0 0 chr2 142628626 142628716 -110627867 - L1MC4 LINE L1 -1339 6703 6614 * 415 169 14 0 chr2 142629593 142629664 -110626919 - LTR16B LTR ERVL 0 464 393 261 338 52 19 chr2 142629836 142629990 -110626593 + L2 LINE L2 2599 2757 -557 186 283 81 40 chr2 142630474 142630647 -110625936 + L2 LINE L2 2297 2476 -838 2110 116 0 0 chr2 142630760 142631054 -110625529 - AluSc SINE Alu -15 294 1 315 242 174 0 chr2 142631247 142631379 -110625204 - L1ME4a LINE L1 -1 6120 5966 194 103 0 26 chr2 142631387 142631426 -110625157 + (TG)n Simple_repeat Simple_repeat 1 38 0 374 242 100 0 chr2 142631450 142631570 -110625013 - MLT1L LTR MaLR -9 606 475 340 211 0 14 chr2 142631707 142631778 -110624805 - MLT1J2 LTR MaLR -321 129 60 2216 119 13 0 chr2 142631942 142632244 -110624339 - AluSq SINE Alu -7 306 1 186 167 0 0 chr2 142632731 142632767 -110623816 + GA-rich Low_complexity Low_complexity 1 36 0 225 0 0 0 chr2 142632912 142632937 -110623646 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 1688 85 5 0 chr2 142632937 142633149 -110623434 - AluSg/x SINE Alu -32 278 66 1789 192 28 28 chr2 142633867 142634170 -110622413 + MLT1A1 LTR MaLR 12 317 -48 2058 114 13 7 chr2 142634170 142634469 -110622114 - AluY SINE Alu -9 302 2 1789 192 28 28 chr2 142634469 142634519 -110622064 + MLT1A1 LTR MaLR 316 365 0 200 35 35 0 chr2 142635491 142635520 -110621063 + (TTTC)n Simple_repeat Simple_repeat 2 31 0 305 174 47 58 chr2 142636958 142637044 -110619539 - L1MC5 LINE L1 -50 7911 7827 180 0 0 0 chr2 142640376 142640396 -110616187 + (T)n Simple_repeat Simple_repeat 1 20 0 3388 138 25 4 chr2 142640593 142641106 -110615477 + MER1A DNA MER1_type 3 526 -1 2362 101 0 3 chr2 142641130 142641437 -110615146 + AluSq SINE Alu 1 306 -7 192 336 106 35 chr2 142641514 142641592 -110614991 - L2 LINE L2 -4 3268 3178 2035 112 3 82 chr2 142641592 142641923 -110614660 - AluSq SINE Alu -8 305 1 192 336 106 35 chr2 142641923 142641957 -110614626 - L2 LINE L2 -94 3178 3148 231 246 14 29 chr2 142642379 142642448 -110614135 - MER5A DNA MER1_type -106 83 16 198 0 0 0 chr2 142642467 142642489 -110614094 + (CA)n Simple_repeat Simple_repeat 2 23 0 567 232 121 80 chr2 142642513 142642731 -110613852 - L1MC5 LINE L1 -32 7929 7721 1994 110 33 0 chr2 142642731 142643004 -110613579 - AluSx SINE Alu -12 300 19 567 232 121 80 chr2 142643004 142643272 -110613311 - L1MC5 LINE L1 -240 7721 7423 543 313 71 9 chr2 142644379 142644603 -110611980 + MIR SINE MIR 2 239 -23 808 235 10 46 chr2 142646210 142646406 -110610177 - MLT1I LTR MaLR -3 406 218 5272 155 24 10 chr2 142646414 142647296 -110609287 - MER4D LTR ERV1 -9 894 1 265 320 66 8 chr2 142647297 142647371 -110609212 - MLT1I LTR MaLR -188 221 136 961 195 122 100 chr2 142647371 142647920 -110608663 + MER34B LTR ERV1 5 565 0 265 320 66 8 chr2 142647920 142647967 -110608616 - MLT1I LTR MaLR -273 136 93 4472 100 11 63 chr2 142648054 142648783 -110607800 - LTR8 LTR ERV1 0 691 1 780 243 34 43 chr2 142648792 142649027 -110607556 - MIR SINE MIR 0 262 30 568 274 46 20 chr2 142649301 142649498 -110607085 - MIR SINE MIR 0 262 61 246 280 50 40 chr2 142650030 142650130 -110606453 - L1MC4 LINE L1 -142 7900 7800 751 260 29 0 chr2 142650130 142650303 -110606280 + MER5A DNA MER1_type 1 178 -11 3925 224 163 26 chr2 142650327 142651510 -110605073 - L1MC4 LINE L1 -235 7807 6463 1705 199 6 13 chr2 142652397 142652709 -110603874 - AluJb SINE Alu 0 312 3 2532 162 9 21 chr2 142653491 142653532 -110603051 - MSTB LTR MaLR 0 426 386 1795 179 3 7 chr2 142653532 142653834 -110602749 + AluJo SINE Alu 1 301 -11 2532 162 9 21 chr2 142653834 142654223 -110602360 - MSTB LTR MaLR -40 386 1 8954 158 47 31 chr2 142654223 142655703 -110600880 - MSTB-int LTR MaLR 0 1651 141 2016 140 0 0 chr2 142655703 142655989 -110600594 - AluSx SINE Alu -24 288 3 8954 158 47 31 chr2 142655989 142656133 -110600450 - MSTB-int LTR MaLR -1510 141 1 2475 172 34 0 chr2 142656133 142656545 -110600038 - MSTB LTR MaLR 0 426 1 813 229 20 47 chr2 142657285 142657538 -110599045 - HAL1 LINE L1 -741 1766 1521 2660 108 3 11 chr2 142657658 142658036 -110598547 - THE1C LTR MaLR 0 375 1 229 269 114 80 chr2 142658052 142658385 -110598198 - HAL1 LINE L1 -1195 1312 957 1241 177 142 8 chr2 142658385 142658645 -110597938 - AluJo SINE Alu -7 295 1 229 269 114 80 chr2 142658645 142658786 -110597797 - HAL1 LINE L1 -1550 957 822 277 303 136 22 chr2 142659427 142659655 -110596928 - HAL1b LINE L1 -701 647 394 731 154 0 51 chr2 142659720 142659876 -110596707 - L1PA16 LINE L1 0 6166 6019 23 0 0 0 chr2 142660008 142660031 -110596552 + AT_rich Low_complexity Low_complexity 1 23 0 1380 189 62 14 chr2 142660068 142660359 -110596224 - AluJo SINE Alu -7 305 1 1321 179 68 119 chr2 142660688 142661073 -110595510 - MLT1A1 LTR MaLR 0 365 1 1913 141 40 9 chr2 142661601 142661927 -110594656 + L1MB3 LINE L1 5683 6018 -165 251 253 74 126 chr2 142662097 142662287 -110594296 + MIR SINE MIR 77 256 -6 297 75 0 0 chr2 142662617 142662657 -110593926 + (CA)n Simple_repeat Simple_repeat 1 40 0 356 328 64 8 chr2 142662900 142663025 -110593558 + L2 LINE L2 3136 3267 -5 1617 148 180 3 chr2 142663294 142663605 -110592978 + MER47A DNA MER2_type 1 366 0 33437 72 8 6 chr2 142664579 142670414 -110586169 + L1PA6 LINE L1 311 6152 -2 188 338 154 44 chr2 142671109 142671402 -110585181 - L2 LINE L2 -1 3271 2947 240 289 121 104 chr2 142671408 142671581 -110585002 - L2 LINE L2 -3 3310 3135 2285 155 5 29 chr2 142671605 142671980 -110584603 - L1PB4 LINE L1 -9 6849 6484 348 161 5 72 chr2 142671993 142672186 -110584397 + (TA)n Simple_repeat Simple_repeat 1 180 0 3494 194 46 15 chr2 142672261 142672788 -110583795 - L1PB4 LINE L1 -1913 4935 4377 297 0 0 0 chr2 142672788 142672821 -110583762 + (TG)n Simple_repeat Simple_repeat 2 34 0 3494 194 46 15 chr2 142672821 142673032 -110583551 - L1PB4 LINE L1 -2471 4377 4174 2498 216 13 39 chr2 142673036 142674182 -110582401 - L1PB4 LINE L1 -3437 3411 2295 4121 268 11 6 chr2 142674184 142675280 -110581303 - L1PB4 LINE L1 -4698 2151 1050 404 315 76 54 chr2 142675417 142675601 -110580982 - L1PB4 LINE L1 -6064 785 598 367 312 118 32 chr2 142676183 142676369 -110580214 - L1PB4 LINE L1 -6061 788 587 1292 311 35 5 chr2 142676397 142676821 -110579762 - L1PB4 LINE L1 -6402 447 11 2571 205 38 6 chr2 142676832 142677330 -110579253 + MLT2B2 LTR ERVL 1 514 -1 949 274 77 40 chr2 142677483 142677961 -110578622 - L2 LINE L2 -385 2929 2434 621 297 105 9 chr2 142678024 142678243 -110578340 + MIR SINE MIR 23 262 0 224 264 35 35 chr2 142678989 142679076 -110577507 - L2 LINE L2 -181 3091 3005 1358 205 18 11 chr2 142679318 142679596 -110576987 - L1MB4 LINE L1 0 6180 5901 21 36 0 0 chr2 142679887 142679915 -110576668 + AT_rich Low_complexity Low_complexity 1 28 0 3362 73 2 8 chr2 142679968 142680507 -110576076 - L1PA8 LINE L1 -485 5687 5151 3548 100 2 0 chr2 142680507 142680974 -110575609 + L1PA8 LINE L1 5698 6169 -3 33 0 0 0 chr2 142681286 142681319 -110575264 + AT_rich Low_complexity Low_complexity 1 33 0 204 40 0 0 chr2 142681501 142681526 -110575057 + (T)n Simple_repeat Simple_repeat 1 25 0 1762 128 0 0 chr2 142681526 142681783 -110574800 - L1PA6 LINE L1 0 6154 5898 2411 53 0 23 chr2 142682050 142682353 -110574230 + AluY SINE Alu 1 296 -15 385 326 27 14 chr2 142682508 142682655 -110573928 - MIR SINE MIR -104 158 10 353 216 0 39 chr2 142683762 142683864 -110572719 - L1ME4a LINE L1 -11 6110 6013 369 245 141 31 chr2 142683982 142684174 -110572409 - L1ME4a LINE L1 -20 6101 5889 193 235 235 0 chr2 142685130 142685211 -110571372 - MIR SINE MIR -66 196 97 770 252 124 55 chr2 142685396 142685873 -110570710 - L1MC4a LINE L1 -1620 6188 5679 2157 252 55 24 chr2 142686067 142686689 -110569894 - Tigger8 DNA MER2_type -25 641 1 1464 227 136 43 chr2 142687894 142688356 -110568227 - MLT1D LTR MaLR 0 505 1 2303 226 27 12 chr2 142688952 142689515 -110567068 - L1MC4 LINE L1 -701 7341 6771 2084 102 0 4 chr2 142689574 142689849 -110566734 - AluSx SINE Alu -22 290 17 422 303 25 8 chr2 142689990 142690109 -110566474 - LTR16C LTR ERVL -183 308 188 698 300 200 15 chr2 142690602 142691074 -110565509 + L2 LINE L2 2454 3010 -303 293 162 15 0 chr2 142691084 142691152 -110565431 + CT-rich Low_complexity Low_complexity 2 70 0 402 321 131 38 chr2 142691166 142691280 -110565303 + L2 LINE L2 2991 3093 -220 2522 190 116 6 chr2 142691280 142691780 -110564803 - MER89 LTR ERV1 -4 555 1 402 321 131 38 chr2 142691780 142691955 -110564628 + L2 LINE L2 3093 3307 -6 416 303 150 34 chr2 142692159 142692393 -110564190 - MER102a DNA MER1_type -17 313 53 1413 152 7 39 chr2 142693997 142694190 -110562393 + MER45B DNA AcHobo 769 952 -629 2602 122 14 3 chr2 142694190 142694550 -110562033 - THE1B LTR MaLR 0 364 1 1413 152 7 39 chr2 142694550 142694637 -110561946 + MER45B DNA AcHobo 952 1040 0 559 124 48 9 chr2 142694943 142695048 -110561535 - L1MA8 LINE L1 -121 6170 6062 182 380 0 0 chr2 142695207 142695257 -110561326 - MIR SINE MIR -181 81 32 1659 192 3 19 chr2 142695442 142695759 -110560824 + AluJb SINE Alu 1 312 0 457 260 71 13 chr2 142695872 142696026 -110560557 + MIR SINE MIR 20 182 -80 182 314 0 0 chr2 142696323 142696374 -110560209 - MIR3 SINE MIR 0 208 158 580 246 66 6 chr2 142696374 142696541 -110560042 - MIR SINE MIR -1 261 85 386 268 31 24 chr2 142696617 142696744 -110559839 - MIR3 SINE MIR -66 142 15 249 88 0 0 chr2 142697477 142697511 -110559072 - MLT2B1 LTR ERVL -3 512 479 640 81 0 69 chr2 142697511 142697684 -110558899 + (TCTA)n Simple_repeat Simple_repeat 3 163 0 255 61 0 0 chr2 142697694 142697727 -110558856 + (CA)n Simple_repeat Simple_repeat 2 34 0 2133 214 50 0 chr2 142697817 142698261 -110558322 - MLT2B1 LTR ERVL -54 466 1 218 175 0 0 chr2 142699037 142699077 -110557506 + (CA)n Simple_repeat Simple_repeat 2 41 0 444 235 12 0 chr2 142699079 142699164 -110557419 - Tigger5 DNA MER2_type -1 2322 2237 331 123 138 15 chr2 142699211 142699276 -110557307 - Tigger5 DNA MER2_type 0 2323 2251 276 149 0 21 chr2 142699247 142699294 -110557289 - Tigger5 DNA MER2_type -2271 52 7 * 3635 154 50 2 chr2 142699307 142699884 -110556699 + MER6A DNA MER2_type 1 605 0 2449 137 0 78 chr2 142699884 142700307 -110556276 - MLT1B LTR MaLR 0 390 1 296 259 9 0 chr2 142700319 142700427 -110556156 + (TATATG)n Simple_repeat Simple_repeat 6 114 0 628 246 40 11 chr2 142700445 142700620 -110555963 - MIR SINE MIR -58 204 25 266 311 59 22 chr2 142701130 142701265 -110555318 + MIR3 SINE MIR 5 144 -64 743 262 18 44 chr2 142701364 142701589 -110554994 + MIR SINE MIR 12 230 -32 644 213 94 35 chr2 142701775 142701977 -110554606 - MIR SINE MIR -16 246 33 2389 83 0 0 chr2 142702729 142703018 -110553565 - AluSq SINE Alu -24 289 1 574 369 4 0 chr2 142703026 142703259 -110553324 - MIR SINE MIR 0 262 29 359 263 11 0 chr2 142703592 142703687 -110552896 - MER81 DNA DNA -3 111 16 2617 176 49 14 chr2 142703826 142704332 -110552251 + MER67A LTR ERV1 6 529 -14 200 189 0 0 chr2 142704788 142704825 -110551758 + (CA)n Simple_repeat Simple_repeat 2 38 0 207 200 27 13 chr2 142704832 142704907 -110551676 + (TATATG)n Simple_repeat Simple_repeat 3 78 0 375 274 159 62 chr2 142705039 142705265 -110551318 + MIR SINE MIR 3 250 -12 346 262 146 51 chr2 142705463 142705684 -110550899 - MIR SINE MIR -13 249 10 373 213 46 28 chr2 142705868 142705976 -110550607 - MLT1L LTR MaLR -10 605 496 263 288 0 0 chr2 142706288 142706354 -110550229 - MLT1L LTR MaLR -415 200 135 349 259 0 12 chr2 142706504 142706589 -110549994 - MLT1L LTR MaLR -529 86 3 23 33 0 0 chr2 142707394 142707424 -110549159 + AT_rich Low_complexity Low_complexity 1 30 0 5263 135 59 25 chr2 142707464 142708654 -110547929 - L1MA8 LINE L1 0 6291 5052 411 317 42 8 chr2 142708751 142708871 -110547712 + MIR3 SINE MIR 1 124 -84 477 193 77 111 chr2 142709100 142709281 -110547302 - Charlie8 DNA MER1_type -2241 176 2 397 290 184 25 chr2 142709358 142709603 -110546980 - L3 LINE CR1 -5 1572 1289 192 158 0 0 chr2 142710796 142710834 -110545749 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 3610 162 36 3 chr2 142710927 142711513 -110545070 + MER6A DNA MER2_type 1 605 0 448 274 137 15 chr2 142711831 142712028 -110544555 + MIR SINE MIR 14 234 -28 1243 211 101 67 chr2 142712077 142712541 -110544042 + MLT2B1 LTR ERVL 1 480 -40 300 135 77 0 chr2 142712581 142712633 -110543950 + MLT2B1 LTR ERVL 465 520 0 392 121 0 44 chr2 142713936 142714027 -110542556 + (TTCC)n Simple_repeat Simple_repeat 2 88 0 303 231 51 51 chr2 142714033 142714122 -110542461 - L2 LINE L2 -36 3277 3186 423 0 0 0 chr2 142714122 142714169 -110542414 + (TG)n Simple_repeat Simple_repeat 2 48 0 303 231 51 51 chr2 142714169 142714196 -110542387 - L2 LINE L2 -126 3187 3161 1811 250 50 48 chr2 142714707 142715264 -110541319 - MLT1E LTR MaLR 0 593 36 388 318 24 8 chr2 142715274 142715400 -110541183 + MER5A DNA MER1_type 56 183 -6 2839 196 43 31 chr2 142715690 142716362 -110540221 + L1MD2 LINE L1 5679 6358 -1 265 174 22 0 chr2 142716876 142716922 -110539661 + L2 LINE L2 3267 3313 0 202 0 0 83 chr2 142717660 142717696 -110538887 + (TTTTTG)n Simple_repeat Simple_repeat 4 36 0 278 327 10 0 chr2 142719190 142719291 -110537292 + L1MC4a LINE L1 7314 7415 -393 * 1015 243 111 57 chr2 142719265 142719753 -110536830 + L1MC5 LINE L1 7301 7826 -135 1999 134 10 0 chr2 142719753 142720043 -110536540 + AluSx SINE Alu 4 296 -16 1015 243 111 57 chr2 142720043 142720130 -110536453 + L1MC5 LINE L1 7826 7907 -54 234 299 201 0 chr2 142721433 142721567 -110535016 + MER104 DNA Tc2 7 167 -13 516 253 107 44 chr2 142723449 142723674 -110532909 + MIR SINE MIR 14 252 -10 1241 311 181 24 chr2 142723775 142724943 -110531640 + L2 LINE L2 1943 3311 -2 590 311 62 0 chr2 142725068 142725293 -110531290 + MIR SINE MIR 9 247 -15 303 247 173 0 chr2 142726544 142726625 -110529958 + L2 LINE L2 3169 3263 -9 359 273 125 23 chr2 142728068 142728196 -110528387 - MIR SINE MIR -110 152 12 294 29 0 0 chr2 142728664 142728699 -110527884 + (TG)n Simple_repeat Simple_repeat 1 35 0 601 299 100 0 chr2 142729449 142729700 -110526883 + L1ME LINE L1 5386 5661 -460 271 317 22 39 chr2 142729707 142729887 -110526696 + L1ME LINE L1 5706 5882 -239 334 317 10 10 chr2 142730943 142731044 -110525539 + MIR SINE MIR 45 145 -117 365 301 107 34 chr2 142731057 142731263 -110525320 - MIR SINE MIR 0 262 42 1881 136 78 39 chr2 142731813 142732174 -110524409 - THE1C LTR MaLR 0 375 1 768 298 32 0 chr2 142732219 142732467 -110524116 - MER102b DNA MER1_type 0 341 86 2003 158 71 8 chr2 142733055 142733409 -110523174 + MLT1B LTR MaLR 15 390 0 183 139 0 0 chr2 142734621 142734657 -110521926 + (CCCCCG)n Simple_repeat Simple_repeat 5 40 0 1016 272 145 22 chr2 142734716 142735206 -110521377 - L2 LINE L2 -2 3311 2761 189 269 30 15 chr2 142735316 142735383 -110521200 - MIR SINE MIR -171 91 24 327 96 77 0 chr2 142735621 142735673 -110520910 - MLT2B2 LTR ERVL 0 520 465 1171 139 143 17 chr2 142735698 142735935 -110520648 + MSTA LTR MaLR 16 282 -146 2328 179 17 59 chr2 142735941 142736416 -110520167 - MLT2B2 LTR ERVL -60 455 1 1861 218 54 54 chr2 142736619 142737229 -110519354 + L1ME3A LINE L1 5561 6170 0 516 289 18 12 chr2 142738397 142738563 -110518020 + MLT1L LTR MaLR 114 280 -335 545 307 75 9 chr2 142738594 142738822 -110517761 + MLT1L LTR MaLR 369 611 -4 464 292 35 42 chr2 142739093 142739344 -110517239 - MIR SINE MIR -14 248 3 197 343 219 6 chr2 142740093 142740271 -110516312 - L3 LINE CR1 -140 1437 1222 2159 128 10 0 chr2 142740556 142740862 -110515721 - AluSx SINE Alu -3 309 1 228 304 0 0 chr2 142741463 142741519 -110515064 + (TG)n Simple_repeat Simple_repeat 1 56 0 202 304 0 0 chr2 142742048 142742104 -110514479 - L3 LINE CR1 -189 1388 1333 21 36 0 0 chr2 142742298 142742326 -110514257 + AT_rich Low_complexity Low_complexity 1 28 0 233 336 138 9 chr2 142743009 142743125 -110513458 - L2 LINE L2 0 3313 3183 602 303 53 0 chr2 142743130 142743318 -110513265 - MIR SINE MIR -14 248 51 702 315 100 13 chr2 142743358 142743669 -110512914 + MLT1I LTR MaLR 72 409 0 2799 183 30 23 chr2 142744151 142744726 -110511857 - L1MB7 LINE L1 -16 6168 5590 218 318 0 0 chr2 142744813 142744876 -110511707 - L2 LINE L2 0 3313 3251 258 292 115 23 chr2 142744892 142745022 -110511561 - L3 LINE CR1 -7 1570 1429 234 295 49 16 chr2 142745040 142745162 -110511421 - L1ME4a LINE L1 -4 6117 5992 359 285 13 7 chr2 142745706 142745857 -110510726 + (TA)n Simple_repeat Simple_repeat 2 153 0 2844 196 92 75 chr2 142746084 142746255 -110510328 - L1MD2 LINE L1 -36 6323 6156 288 0 0 0 chr2 142746255 142746287 -110510296 + (TG)n Simple_repeat Simple_repeat 2 33 0 2844 196 92 75 chr2 142746287 142746310 -110510273 - L1MD2 LINE L1 -203 6156 6135 3261 174 57 18 chr2 142746310 142746982 -110509601 - L1MB7 LINE L1 -11 6173 5476 2844 196 92 75 chr2 142746982 142747084 -110509499 - L1MD2 LINE L1 -224 6135 6036 2521 49 3 10 chr2 142747084 142747389 -110509194 - AluY SINE Alu -8 303 1 2844 196 92 75 chr2 142747389 142747930 -110508653 - L1MD2 LINE L1 -323 6036 5470 554 307 184 6 chr2 142748239 142748555 -110508028 - L3 LINE CR1 -354 1223 852 251 302 88 22 chr2 142748558 142748876 -110507707 - L1M4 LINE L1 -3698 2448 2110 335 311 91 33 chr2 142749042 142749283 -110507300 - L3 LINE CR1 -701 876 622 274 347 162 6 chr2 142750512 142750685 -110505898 - MIR SINE MIR -10 252 53 268 367 34 7 chr2 142750851 142750998 -110505585 - L2 LINE L2 -890 2424 2274 5452 154 24 33 chr2 142751012 142752109 -110504474 + L1MA7 LINE L1 5206 6286 -5 294 315 89 8 chr2 142752246 142752481 -110504102 - L2 LINE L2 -1232 2082 1829 433 303 80 25 chr2 142753284 142753446 -110503137 + MIR3 SINE MIR 35 205 -3 201 289 0 0 chr2 142753645 142753683 -110502900 + L2 LINE L2 3149 3186 -86 880 116 148 42 chr2 142754798 142755014 -110501569 - L1MA9 LINE L1 0 6312 6074 286 327 160 0 chr2 142755770 142755920 -110500663 + L2 LINE L2 3136 3309 -4 506 277 97 10 chr2 142757906 142758112 -110498471 + L2 LINE L2 2437 2660 -654 420 347 117 58 chr2 142758131 142758457 -110498126 + L2 LINE L2 2917 3261 -11 273 29 0 0 chr2 142759797 142759831 -110496752 + (TTCC)n Simple_repeat Simple_repeat 4 37 0 2139 17 4 0 chr2 142761647 142761881 -110494702 + L1PA3 LINE L1 5919 6153 -2 260 373 20 7 chr2 142761945 142762095 -110494488 + MARNA DNA Mariner 380 531 -55 264 333 0 0 chr2 142762095 142762158 -110494425 + MIR SINE MIR 13 75 -187 1736 117 0 0 chr2 142762228 142762458 -110494125 + AluSq SINE Alu 1 230 -83 1452 161 30 54 chr2 142765631 142765929 -110490654 - AluJb SINE Alu -21 291 1 183 250 83 17 chr2 142768227 142768287 -110488296 + L2 LINE L2 3195 3258 -14 351 250 0 0 chr2 142769249 142769317 -110487266 + L2 LINE L2 3246 3313 0 237 129 81 0 chr2 142770097 142770159 -110486424 + (TA)n Simple_repeat Simple_repeat 1 67 0 9340 87 11 8 chr2 142770525 142771851 -110484732 - L1P LINE L1 -948 5198 3868 556 218 68 27 chr2 142772111 142772258 -110484325 - MER34B LTR ERV1 -408 157 5 1328 159 64 24 chr2 142772746 142773042 -110483541 - LTR37A LTR ERV1 -2 424 117 504 267 129 5 chr2 142774300 142774502 -110482081 - MIR SINE MIR -7 255 29 22 80 0 0 chr2 142775628 142775678 -110480905 + GC_rich Low_complexity Low_complexity 1 50 0 900 251 20 12 chr2 142777307 142777554 -110479029 - L1MB8 LINE L1 -9 6169 5921 295 301 88 22 chr2 142777661 142777797 -110478786 + L2 LINE L2 2891 3035 -237 13395 90 10 13 chr2 142779437 142781371 -110475212 + L1P LINE L1 2514 4441 -1705 896 154 0 0 chr2 142781487 142781617 -110474966 - AluSq/x SINE Alu -182 130 1 1059 213 35 49 chr2 142782225 142782512 -110474071 + L1ME1 LINE L1 5570 5852 -314 297 270 141 43 chr2 142785916 142786133 -110470450 - MIR SINE MIR -4 258 11 285 260 0 0 chr2 142787211 142787283 -110469300 - AluS SINE Alu -236 67 6 1146 255 41 73 chr2 142787348 142787760 -110468823 - L2 LINE L2 -654 2660 2262 1136 135 28 42 chr2 142787783 142787998 -110468585 + LTR49 LTR ERV1 384 595 0 1156 234 111 9 chr2 142787998 142788314 -110468269 - L2 LINE L2 -1041 2273 1926 209 264 19 0 chr2 142788738 142788791 -110467792 - L3 LINE CR1 -5 1572 1519 279 263 26 0 chr2 142789026 142789102 -110467481 - AluSg/x SINE Alu -6 296 219 306 303 59 25 chr2 142789558 142789677 -110466906 - MIR3 SINE MIR -25 183 61 265 318 9 19 chr2 142790154 142790261 -110466322 - MER5B DNA MER1_type -3 175 70 817 155 63 0 chr2 142790655 142790797 -110465786 + AluJb SINE Alu 147 297 -15 21 0 0 0 chr2 142792493 142792514 -110464069 + AT_rich Low_complexity Low_complexity 1 21 0 724 151 68 24 chr2 142793157 142793362 -110463221 - AluJb SINE Alu -1 311 5 212 250 54 18 chr2 142793534 142793590 -110462993 + L2 LINE L2 3241 3298 -15 331 267 114 0 chr2 142793722 142793827 -110462756 - MER112 DNA MER1_type -48 212 96 773 160 40 95 chr2 142795582 142795782 -110460801 - MER53 DNA DNA 0 189 1 593 190 0 0 chr2 142796163 142796263 -110460320 + FLAM_A SINE Alu 37 136 -6 358 276 131 7 chr2 142796355 142796500 -110460083 - MIR SINE MIR -3 259 97 537 229 15 15 chr2 142796509 142796640 -110459943 - MER94 DNA DNA 0 134 4 2269 95 0 0 chr2 142797226 142797539 -110459044 - AluSx SINE Alu 0 313 1 24 0 0 0 chr2 142798052 142798076 -110458507 + AT_rich Low_complexity Low_complexity 1 24 0 1822 156 36 10 chr2 142799051 142799230 -110457353 - AluJb SINE Alu -2 310 118 351 0 0 0 chr2 142799230 142799269 -110457314 + (TG)n Simple_repeat Simple_repeat 2 40 0 1822 156 36 10 chr2 142799269 142799391 -110457192 - AluJb SINE Alu -194 118 1 218 298 331 0 chr2 142799483 142799607 -110456976 - MIR SINE MIR -14 248 84 21 36 0 0 chr2 142799671 142799699 -110456884 + AT_rich Low_complexity Low_complexity 1 28 0 2170 83 0 0 chr2 142800127 142800404 -110456179 - AluSg SINE Alu -2 308 32 1404 188 46 0 chr2 142800556 142800838 -110455745 - Tigger2 DNA MER2_type -2423 295 1 1064 62 0 0 chr2 142802328 142802458 -110454125 - L1PA6 LINE L1 -494 5660 5531 4358 66 0 0 chr2 142802458 142802974 -110453609 + L1PA6 LINE L1 5636 6153 -1 1895 90 33 63 chr2 142804011 142804172 -110452411 - AluSx SINE Alu -21 291 127 206 32 32 0 chr2 142804172 142804203 -110452380 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 1939 121 3 14 chr2 142804203 142804485 -110452098 - AluSg SINE Alu -31 279 1 1895 90 33 63 chr2 142804485 142804622 -110451961 - AluSx SINE Alu -183 129 1 465 239 204 10 chr2 142804633 142804834 -110451749 - L1MC4a LINE L1 -1860 5948 5709 483 296 81 6 chr2 142804955 142805127 -110451456 - MIR3 SINE MIR -23 185 1 529 357 32 4 chr2 142805255 142805481 -110451102 - L2 LINE L2 -190 3082 2853 680 199 40 45 chr2 142805507 142805683 -110450900 - MIR SINE MIR -15 247 73 354 301 68 20 chr2 142805884 142806030 -110450553 - MIR SINE MIR -90 172 20 273 252 181 16 chr2 142806094 142806221 -110450362 + MER103 DNA DNA 2 149 -17 947 220 56 9 chr2 142806660 142806874 -110449709 + L1ME3A LINE L1 5942 6165 -5 569 311 35 96 chr2 142807067 142807379 -110449204 + L2 LINE L2 2979 3271 -1 663 282 35 6 chr2 142808971 142809145 -110447438 + MER5A DNA MER1_type 5 183 -6 2273 107 3 0 chr2 142810141 142810450 -110446133 - AluSx SINE Alu -2 310 1 1255 149 84 33 chr2 142810653 142810928 -110445655 + AluSp SINE Alu 9 297 -16 581 278 218 25 chr2 142811054 142811730 -110444853 - L2 LINE L2 0 3313 2496 2353 79 0 3 chr2 142811970 142812262 -110444321 - AluSg SINE Alu -19 291 1 509 149 206 0 chr2 142813592 142813699 -110442884 + MER3 DNA MER1_type 81 209 0 939 207 40 40 chr2 142813700 142813927 -110442656 + MIR SINE MIR 26 252 -10 308 286 0 0 chr2 142814073 142814143 -110442440 - L2 LINE L2 -2 3311 3242 1105 72 59 0 chr2 142816172 142816325 -110440258 - Charlie3 DNA MER1_type -5 2705 2544 2222 110 3 0 chr2 142816327 142816619 -110439964 + AluSq SINE Alu 1 293 -20 241 291 93 0 chr2 142816645 142816731 -110439852 - L3 LINE CR1 -1 1576 1483 229 178 22 0 chr2 142816840 142816885 -110439698 - MIR SINE MIR -1 261 216 1190 212 145 14 chr2 142816903 142817200 -110439383 + MER2 DNA MER2_type 10 345 0 196 145 65 48 chr2 142817233 142817295 -110439288 - MIR SINE MIR -191 71 9 457 242 17 0 chr2 142817333 142817453 -110439130 + AluSg SINE Alu 2 123 -187 2344 22 0 33 chr2 142817555 142817826 -110438757 + SVA Other Other 1125 1386 0 195 42 0 0 chr2 142818246 142818270 -110438313 + (T)n Simple_repeat Simple_repeat 1 24 0 187 254 109 18 chr2 142818574 142818629 -110437954 + L2 LINE L2 3023 3082 -190 2339 101 0 3 chr2 142818912 142819209 -110437374 - AluY SINE Alu -15 296 1 1303 194 0 16 chr2 142819223 142819470 -110437113 - Charlie7 DNA MER1_type -1979 633 391 589 326 48 5 chr2 142820312 142820664 -110435919 - L1ME LINE L1 -541 5621 5257 359 221 204 36 chr2 142820971 142821288 -110435295 - MLT1J LTR MaLR 0 511 208 2195 124 0 16 chr2 142821288 142821603 -110434980 - AluSx SINE Alu -2 310 1 503 274 86 17 chr2 142821677 142821852 -110434731 - MIR SINE MIR -65 197 11 242 354 12 0 chr2 142822236 142822318 -110434265 - L3 LINE CR1 -101 1476 1394 378 0 0 0 chr2 142823019 142823061 -110433522 + (T)n Simple_repeat Simple_repeat 1 42 0 190 370 30 15 chr2 142823122 142823257 -110433326 - MIR SINE MIR -32 230 94 1924 97 111 7 chr2 142824528 142824807 -110431776 - AluSg1 SINE Alu -1 308 1 348 222 198 32 chr2 142824809 142824935 -110431648 - MER5A DNA MER1_type 0 189 43 508 259 7 0 chr2 142825201 142825336 -110431247 + L1PB4 LINE L1 6019 6154 -2 21 0 0 0 chr2 142825336 142825357 -110431226 + AT_rich Low_complexity Low_complexity 1 21 0 672 211 30 8 chr2 142825412 142825545 -110431038 + FRAM SINE Alu 11 146 -30 30 45 0 0 chr2 142826637 142826681 -110429902 + AT_rich Low_complexity Low_complexity 1 44 0 449 293 114 0 chr2 142826802 142826925 -110429658 - L2 LINE L2 0 3272 3136 2400 84 7 13 chr2 142826967 142827277 -110429306 - AluSp SINE Alu -5 308 1 195 388 0 12 chr2 142827715 142827795 -110428788 - L2 LINE L2 -177 3095 3017 296 197 30 0 chr2 142827967 142828033 -110428550 + MLT1K LTR MaLR 179 246 -342 23 0 0 0 chr2 142828576 142828599 -110427984 + AT_rich Low_complexity Low_complexity 1 23 0 2058 109 11 3 chr2 142828599 142828882 -110427701 - AluSx SINE Alu -27 285 1 716 181 44 69 chr2 142828906 142829110 -110427473 + MLT1C LTR MaLR 38 236 -231 1489 194 8 11 chr2 142829117 142829385 -110427198 + AluJo SINE Alu 23 289 -23 260 304 39 10 chr2 142829485 142829587 -110426996 - MLT1I LTR MaLR -59 350 246 346 302 67 0 chr2 142829831 142829980 -110426603 + MER103 DNA DNA 8 166 0 28 0 0 0 chr2 142830766 142830794 -110425789 + AT_rich Low_complexity Low_complexity 1 28 0 2140 87 3 17 chr2 142830998 142831286 -110425297 + AluSg SINE Alu 1 284 -26 22 0 0 0 chr2 142831483 142831505 -110425078 + AT_rich Low_complexity Low_complexity 1 22 0 230 234 35 39 chr2 142832062 142832316 -110424267 + CT-rich Low_complexity Low_complexity 1 253 0 375 228 129 18 chr2 142833037 142833208 -110423375 - L1ME LINE L1 -297 5824 5635 509 276 29 18 chr2 142833403 142833573 -110423010 + MIR SINE MIR 91 262 0 2175 95 3 13 chr2 142833584 142833888 -110422695 - AluSx SINE Alu -11 301 1 432 200 193 45 chr2 142834230 142834520 -110422063 + L1ME4a LINE L1 5743 6075 -46 470 177 115 0 chr2 142835131 142835244 -110421339 - L1MA10 LINE L1 -7 6327 6202 1690 184 0 7 chr2 142835447 142835730 -110420853 + AluJb SINE Alu 11 291 -21 2120 133 0 25 chr2 142837862 142838179 -110418404 + AluSx SINE Alu 1 309 -3 6406 31 1 2 chr2 142838405 142839560 -110417023 + L1HS LINE L1 4890 6044 -111 9120 86 25 1 chr2 142839663 142841081 -110415502 + L1PA6 LINE L1 1573 3023 -3123 6667 61 9 5 chr2 142841183 142842216 -110414367 + L1PA6 LINE L1 5101 6139 -15 2055 246 67 36 chr2 142842859 142843602 -110412981 - L1ME3A LINE L1 0 6170 5405 248 209 144 33 chr2 142843625 142843778 -110412805 - L1ME3A LINE L1 -736 5428 5259 280 320 115 87 chr2 142843974 142844805 -110411778 - L2 LINE L2 0 3272 2420 481 292 131 0 chr2 142846071 142846239 -110410344 + MIR SINE MIR 46 235 -27 359 273 33 15 chr2 142847248 142847408 -110409175 - HAL1b LINE L1 -2 6119 1198 241 293 61 0 chr2 142847501 142847583 -110409000 - L1MC/D LINE L1 -1902 5906 5820 675 168 17 87 chr2 142847683 142847738 -110408845 - MER20 DNA MER1_type -58 161 104 1952 152 40 12 chr2 142847738 142848066 -110408517 - MER1B DNA MER1_type 0 337 1 675 168 17 87 chr2 142848066 142848183 -110408400 - MER20 DNA MER1_type -115 104 1 613 264 36 54 chr2 142848478 142848758 -110407825 - Charlie8 DNA MER1_type -2141 276 2 491 306 44 11 chr2 142849216 142849399 -110407184 - MIR3 SINE MIR -15 193 5 1162 148 34 56 chr2 142850290 142850473 -110406110 + MLT1C LTR MaLR 3 164 -226 342 0 0 0 chr2 142850473 142850511 -110406072 + (CA)n Simple_repeat Simple_repeat 2 39 0 1162 148 34 56 chr2 142850511 142850687 -110405896 + MLT1C LTR MaLR 164 342 -48 249 325 67 42 chr2 142850877 142850997 -110405586 + L2 LINE L2 3149 3271 -1 3316 167 56 28 chr2 142851014 142852232 -110404351 - L1MB7 LINE L1 -131 6053 4815 286 247 37 0 chr2 142852232 142852314 -110404269 + (TA)n Simple_repeat Simple_repeat 1 85 0 506 227 10 2 chr2 142852354 142852487 -110404096 - L1MB7 LINE L1 -1350 4796 4663 211 326 58 0 chr2 142852787 142852873 -110403710 - MIR SINE MIR -63 145 55 2308 145 70 0 chr2 142853003 142853403 -110403180 - MSTC LTR MaLR 0 428 1 186 224 0 0 chr2 142853403 142853462 -110403121 + GA-rich Low_complexity Low_complexity 7 68 0 744 215 129 0 chr2 142853527 142853713 -110402870 + MER63A DNA MER1_type 1 210 0 600 278 148 0 chr2 142853731 142853893 -110402690 + MER5A DNA MER1_type 4 189 0 235 295 16 0 chr2 142854218 142854279 -110402304 + MER5A DNA MER1_type 128 189 0 527 186 100 14 chr2 142854324 142854534 -110402049 + Charlie5 DNA MER1_type 2354 2581 -31 249 33 0 0 chr2 142855360 142855390 -110401193 + (A)n Simple_repeat Simple_repeat 1 30 0 724 178 0 31 chr2 142857781 142857910 -110398673 - AluJb SINE Alu -185 127 3 310 295 21 0 chr2 142858191 142858286 -110398297 + MIR3 SINE MIR 58 154 -54 201 283 0 0 chr2 142858388 142858434 -110398149 - L2 LINE L2 -4 3268 3223 441 233 69 79 chr2 142859030 142859219 -110397364 - LTR16C LTR ERVL -2 489 303 777 315 84 26 chr2 142859242 142859740 -110396843 + L2 LINE L2 1959 2485 -829 215 292 0 0 chr2 142859744 142859792 -110396791 - MIR SINE MIR -149 113 66 209 235 59 44 chr2 142860665 142860733 -110395850 - L2 LINE L2 -2907 407 339 183 262 66 0 chr2 142862113 142862174 -110394409 + L2 LINE L2 3208 3272 0 521 310 148 0 chr2 142862491 142862694 -110393889 + MIR SINE MIR 2 234 -28 953 141 50 55 chr2 142863069 142863113 -110393470 - ORSL DNA AcHobo -43 232 189 2477 27 40 7 chr2 142863113 142863411 -110393172 - AluY SINE Alu -3 308 1 953 141 50 55 chr2 142863411 142863586 -110392997 - ORSL DNA AcHobo -86 189 14 424 305 23 0 chr2 142863661 142863792 -110392791 - MER5A DNA MER1_type -21 168 35 13529 121 23 56 chr2 142864546 142864675 -110391908 - Tigger1 DNA MER2_type -6 2412 2280 1800 130 38 20 chr2 142864675 142864968 -110391615 - AluSq SINE Alu -15 298 1 13529 121 23 56 chr2 142864968 142867331 -110389252 - Tigger1 DNA MER2_type -138 2280 1 1595 243 68 14 chr2 142867443 142868003 -110388580 - MER20B DNA MER1_type -12 771 182 439 285 26 40 chr2 142868383 142868534 -110388049 - MIR SINE MIR -61 201 53 555 290 31 6 chr2 142869756 142869918 -110386665 - MIR SINE MIR -48 214 49 219 69 0 0 chr2 142870101 142870130 -110386453 + (TG)n Simple_repeat Simple_repeat 2 30 0 626 201 26 19 chr2 142870376 142870530 -110386053 - MLT1B LTR MaLR 0 390 236 248 185 74 0 chr2 142870552 142870606 -110385977 - MLT1B LTR MaLR -316 58 1 288 0 0 0 chr2 142870680 142870712 -110385871 + (TC)n Simple_repeat Simple_repeat 2 33 0 300 244 59 42 chr2 142870892 142871011 -110385572 - L1MEd LINE L1 -5957 162 42 1971 153 7 24 chr2 142871056 142871438 -110385145 - L1MB3 LINE L1 -8 6175 5800 * 8608 155 45 52 chr2 142871408 142871778 -110384805 - L1M4c LINE L1 -3988 2396 2025 1151 204 73 0 chr2 142871778 142871998 -110384585 + MER46A DNA MER2_type 1 236 0 8608 155 45 52 chr2 142871998 142872020 -110384563 - L1M4c LINE L1 -4359 2025 2004 2147 125 10 0 chr2 142872020 142872309 -110384274 + AluSg SINE Alu 3 294 -16 8608 155 45 52 chr2 142872309 142873829 -110382754 - L1M4c LINE L1 -4380 2004 496 * 42012 64 8 1 chr2 142873824 142879936 -110376647 + L1PA5 LINE L1 1 6154 0 954 202 40 20 chr2 142880061 142880259 -110376324 - L1M4c LINE L1 -5869 515 314 * 3206 74 7 154 chr2 142880256 142880865 -110375718 - THE1B-int LTR MaLR -1061 519 1 1671 117 22 5 chr2 142880865 142881164 -110375419 - THE1B LTR MaLR 0 364 1 1702 166 29 7 chr2 142882615 142882893 -110373690 - AluJb SINE Alu -28 284 1 271 347 66 0 chr2 142883264 142883385 -110373198 + L2 LINE L2 2882 3010 -262 3150 18 0 0 chr2 142883395 142883735 -110372848 - L1PA2 LINE L1 0 6155 5816 3219 19 3 0 chr2 142883735 142884098 -110372485 + L1PA2 LINE L1 5436 5799 -356 195 273 13 65 chr2 142884251 142884328 -110372255 + L2 LINE L2 3134 3206 -66 1749 198 0 3 chr2 142885308 142885611 -110370972 + AluJo SINE Alu 1 302 -10 205 256 0 0 chr2 142887315 142887358 -110369225 - L2 LINE L2 -92 3221 3179 2055 68 8 0 chr2 142887387 142887638 -110368945 + AluY SINE Alu 44 296 -15 1374 114 0 0 chr2 142888076 142888260 -110368323 + L1PA8A LINE L1 5948 6131 0 240 169 0 46 chr2 142888293 142888358 -110368225 - L1 LINE L1 -1107 5039 4978 356 159 0 0 chr2 142888363 142888426 -110368157 - Alu SINE Alu 0 302 240 371 237 76 34 chr2 142888428 142888506 -110368077 + Charlie2 DNA MER1_type 191 277 -2585 257 0 30 0 chr2 142888506 142888539 -110368044 + (CAAAA)n Simple_repeat Simple_repeat 3 36 0 371 237 76 34 chr2 142888539 142888578 -110368005 + Charlie2 DNA MER1_type 277 313 -2549 752 192 54 12 chr2 142888778 142888945 -110367638 + Charlie2a DNA MER1_type 1487 1660 -1202 942 168 12 0 chr2 142888976 142889137 -110367446 - AluSg/x SINE Alu -13 297 135 458 183 15 66 chr2 142889140 142889277 -110367306 + Charlie2a DNA MER1_type 2732 2861 -1 1921 179 0 0 chr2 142889840 142890141 -110366442 - AluJb SINE Alu -11 301 1 326 242 101 0 chr2 142890769 142890868 -110365715 - MIR SINE MIR -5 257 149 471 287 32 53 chr2 142891092 142891280 -110365303 - MIR SINE MIR 0 262 79 247 349 24 0 chr2 142891288 142891371 -110365212 - MIR SINE MIR -157 105 21 266 342 0 42 chr2 142892004 142892124 -110364459 - L2 LINE L2 -567 2747 2633 1223 197 13 4 chr2 142893196 142893424 -110363159 + MLT1A1 LTR MaLR 134 363 -2 1241 304 80 30 chr2 142893644 142894207 -110362376 + L2 LINE L2 432 1022 -2292 2739 157 25 32 chr2 142894306 142894776 -110361807 - MLT1C LTR MaLR 0 467 1 1106 259 103 63 chr2 142894776 142895301 -110361282 - MER77 LTR ERV1 -7 598 53 442 318 190 16 chr2 142895350 142895671 -110360912 + L2 LINE L2 1089 1465 -1849 713 292 93 30 chr2 142895685 142895986 -110360597 + L2 LINE L2 2398 2717 -597 900 269 123 57 chr2 142896074 142896480 -110360103 + MLT1J2 LTR MaLR 1 433 -17 290 229 111 59 chr2 142896482 142896635 -110359948 + L2 LINE L2 2933 3093 -220 6180 109 0 0 chr2 142896636 142897840 -110358743 - L1PA15 LINE L1 0 6816 5584 1850 116 14 7 chr2 142897840 142898114 -110358469 + L1PA13 LINE L1 5886 6163 0 1764 161 44 3 chr2 142898124 142898440 -110358143 - L1PA15 LINE L1 -1202 5595 5267 * 5342 221 26 14 chr2 142898437 142900540 -110356043 - L1PA15 LINE L1 -3599 3198 1026 596 249 0 117 chr2 142900611 142900816 -110355767 + L2 LINE L2 3121 3301 -12 420 282 18 18 chr2 142901491 142901601 -110354982 + L2 LINE L2 3163 3272 0 229 248 118 26 chr2 142902167 142902320 -110354263 + L1ME LINE L1 5265 5431 -690 225 244 184 40 chr2 142902517 142902718 -110353865 + L1ME LINE L1 5691 5920 -201 454 324 46 21 chr2 142902912 142903150 -110353433 + MIR SINE MIR 13 256 -6 194 313 18 71 chr2 142903242 142903354 -110353229 - MIR3 SINE MIR -98 110 5 198 354 43 93 chr2 142903815 142903976 -110352607 + L2 LINE L2 3034 3186 -86 1389 189 70 14 chr2 142903977 142904263 -110352320 - AluJo SINE Alu -5 307 6 336 363 34 6 chr2 142904663 142904842 -110351741 - MIR SINE MIR -49 213 30 930 178 0 63 chr2 142904857 142905031 -110351552 - FAM SINE Alu -12 163 1 25 65 0 0 chr2 142906022 142906068 -110350515 + AT_rich Low_complexity Low_complexity 1 46 0 183 325 0 84 chr2 142906502 142906585 -110349998 + L2 LINE L2 3030 3105 -167 205 209 23 0 chr2 142906649 142906692 -110349891 + (TATG)n Simple_repeat Simple_repeat 3 46 0 249 268 24 12 chr2 142906702 142906784 -110349799 - MIR SINE MIR -5 257 175 215 356 30 30 chr2 142906791 142906923 -110349660 - MIR SINE MIR -50 212 81 888 169 49 22 chr2 142906945 142907128 -110349455 + MER53 DNA DNA 2 189 0 344 325 91 7 chr2 142908179 142908333 -110348250 - MIR SINE MIR -72 190 24 341 348 62 30 chr2 142908447 142908752 -110347831 - LTR16C LTR ERVL -21 470 156 943 207 120 0 chr2 142909383 142909591 -110346992 + MIR SINE MIR 8 240 -22 1008 306 39 65 chr2 142909708 142910247 -110346336 + L2 LINE L2 1978 2502 -812 382 250 65 24 chr2 142910298 142910370 -110346213 + MER91B DNA MER1_type 1 82 -108 2138 109 31 0 chr2 142910370 142910664 -110345919 - AluSx SINE Alu -9 303 1 382 250 65 24 chr2 142910664 142910715 -110345868 + MER91B DNA MER1_type 82 129 -61 337 360 0 0 chr2 142910735 142910835 -110345748 + MER91B DNA MER1_type 90 189 -1 387 278 118 35 chr2 142910837 142910981 -110345602 + L2 LINE L2 2566 2721 -593 1820 181 87 13 chr2 142910983 142911353 -110345230 - MLT1F LTR MaLR 0 590 144 768 218 4 90 chr2 142911354 142911526 -110345057 + MER20 DNA MER1_type 1 149 -70 4137 131 22 16 chr2 142911526 142912173 -110344410 + MER39B LTR ERV1 3 653 0 768 218 4 90 chr2 142912173 142912234 -110344349 + MER20 DNA MER1_type 149 214 -5 500 268 92 7 chr2 142912234 142912376 -110344207 - MLT1F LTR MaLR -387 155 2 933 281 108 31 chr2 142912377 142912914 -110343669 + L2 LINE L2 2739 3313 0 752 132 62 16 chr2 142914341 142914470 -110342113 + L1PB1 LINE L1 6015 6149 -2 279 304 13 0 chr2 142914689 142914768 -110341815 - L2 LINE L2 -2 3270 3191 201 39 0 0 chr2 142914951 142914977 -110341606 + (A)n Simple_repeat Simple_repeat 1 26 0 2073 139 0 0 chr2 142915092 142915395 -110341188 - AluSq SINE Alu -10 303 1 2302 110 0 0 chr2 142915786 142916086 -110340497 - AluSx SINE Alu -12 300 1 273 319 0 0 chr2 142916664 142916733 -110339850 - L2 LINE L2 -10 3262 3194 458 343 99 41 chr2 142917238 142917560 -110339023 + L2 LINE L2 2331 2678 -636 1895 145 87 35 chr2 142917560 142917904 -110338679 - THE1B LTR MaLR 0 364 3 458 343 99 41 chr2 142917904 142917946 -110338637 + L2 LINE L2 2678 2716 -598 633 243 69 14 chr2 142917949 142918167 -110338416 + L1MC5 LINE L1 7696 7925 -36 322 287 69 51 chr2 142918183 142918399 -110338184 + L2 LINE L2 2705 2924 -390 247 250 83 14 chr2 142918572 142918644 -110337939 + L2 LINE L2 3196 3272 0 327 146 0 0 chr2 142919603 142919658 -110336925 + (GGAA)n Simple_repeat Simple_repeat 4 58 0 440 209 27 27 chr2 142919803 142919913 -110336670 + MER103 DNA DNA 8 117 -49 654 77 0 0 chr2 142920673 142920751 -110335832 - MADE1 DNA Mariner -2 78 1 472 290 60 11 chr2 142922294 142922477 -110334106 + MIR SINE MIR 56 247 -15 201 74 0 0 chr2 142923821 142923848 -110332735 + (GA)n Simple_repeat Simple_repeat 1 27 0 457 299 43 24 chr2 142924618 142924829 -110331754 + L1MEd LINE L1 6 220 -5899 1459 295 55 66 chr2 142924904 142925903 -110330680 + L1MEd LINE L1 226 1213 -4906 403 269 21 7 chr2 142925909 142926050 -110330533 + L1M4 LINE L1 3652 3794 -2352 235 255 20 78 chr2 142926071 142926173 -110330410 + L2 LINE L2 2174 2269 -1045 1423 171 4 19 chr2 142927526 142927789 -110328794 - L1MA7 LINE L1 -390 5901 5643 540 94 39 44 chr2 142927810 142927991 -110328592 + (TA)n Simple_repeat Simple_repeat 1 180 0 245 149 0 21 chr2 142927992 142928039 -110328544 - L1MA7 LINE L1 -535 5648 5603 630 283 53 22 chr2 142928071 142928297 -110328286 + MIR SINE MIR 20 252 -10 255 301 118 52 chr2 142930736 142930965 -110325618 + MIR SINE MIR 18 261 -1 438 309 157 0 chr2 142931999 142932251 -110324332 + L2 LINE L2 2768 3066 -247 1994 211 11 35 chr2 142932262 142932721 -110323862 - L1MCb LINE L1 -5072 973 526 23 0 0 0 chr2 142932936 142932959 -110323624 + AT_rich Low_complexity Low_complexity 1 23 0 302 279 130 72 chr2 142933079 142933287 -110323296 - MIR SINE MIR -17 245 26 1297 155 18 18 chr2 142933609 142933828 -110322755 + MER20 DNA MER1_type 1 219 0 2631 110 11 11 chr2 142933939 142934303 -110322280 - THE1B LTR MaLR 0 364 1 1930 133 72 35 chr2 142938209 142938572 -110318011 + THE1C LTR MaLR 4 375 0 246 282 81 48 chr2 142938577 142938701 -110317882 + MLT1J2 LTR MaLR 278 405 -45 489 328 33 16 chr2 142938962 142939145 -110317438 + MER5A DNA MER1_type 2 187 -2 445 241 17 17 chr2 142939258 142939374 -110317209 + L2 LINE L2 3198 3313 0 * 483 326 151 41 chr2 142939325 142940447 -110316136 - L2 LINE L2 -543 2771 1527 185 192 123 41 chr2 142941512 142941585 -110314998 - L2 LINE L2 -46 3226 3148 487 260 0 80 chr2 142941674 142941824 -110314759 + MER5B DNA MER1_type 1 138 -40 4046 205 75 3 chr2 142941833 142942745 -110313838 - L1MD1 LINE L1 0 6636 5660 27 0 0 0 chr2 142942762 142942789 -110313794 + AT_rich Low_complexity Low_complexity 1 27 0 672 249 6 0 chr2 142942789 142942958 -110313625 - L1MD1 LINE L1 -874 5666 5497 2652 233 68 20 chr2 142942958 142943723 -110312860 - L1MD1 LINE L1 -4537 2003 1202 280 179 36 0 chr2 142943728 142943784 -110312799 - MER112 DNA MER1_type -202 58 1 198 293 53 140 chr2 142943912 142944062 -110312521 + L2 LINE L2 3021 3157 -115 357 172 16 0 chr2 142944164 142944228 -110312355 + L1MC4 LINE L1 7208 7272 -770 307 197 49 0 chr2 142944227 142944288 -110312295 + L1MC4 LINE L1 7788 7851 -191 * 242 174 0 0 chr2 142944306 142944352 -110312231 + L1MD3 LINE L1 7942 7987 -8 1837 136 7 14 chr2 142944648 142944927 -110311656 + AluJo SINE Alu 6 282 -30 252 0 0 0 chr2 142944927 142944955 -110311628 + (CAAT)n Simple_repeat Simple_repeat 1 28 0 334 308 83 58 chr2 142945910 142946066 -110310517 + MIR3 SINE MIR 21 180 -28 180 140 35 18 chr2 142946304 142946361 -110310222 + (TA)n Simple_repeat Simple_repeat 1 58 0 2254 124 0 7 chr2 142946977 142947284 -110309299 + AluSx SINE Alu 1 305 -7 227 325 24 0 chr2 142947907 142947990 -110308593 + L2 LINE L2 2569 2653 -661 487 312 57 7 chr2 142949375 142949516 -110307067 - L2 LINE L2 -9 3263 3116 180 0 0 0 chr2 142949808 142949828 -110306755 + (A)n Simple_repeat Simple_repeat 1 20 0 488 202 115 38 chr2 142950602 142950785 -110305798 + LTR33 LTR ERVL 307 503 -18 1798 63 45 66 chr2 142952362 142952648 -110303935 - L1PA8 LINE L1 -7 6165 5886 363 290 65 51 chr2 142952869 142953007 -110303576 + L2 LINE L2 3126 3265 -7 180 229 0 0 chr2 142953014 142953049 -110303534 - L2 LINE L2 -23 3249 3215 380 300 10 27 chr2 142953091 142953266 -110303317 - MIR SINE MIR -32 230 1 2419 192 50 2 chr2 143004713 143005212 -110251371 + L1MB7 LINE L1 5620 6142 -42 516 254 42 3 chr2 143005342 143005514 -110251069 + MLT1H LTR MaLR 4 193 -374 2252 107 3 3 chr2 143008382 143008681 -110247902 + AluSc SINE Alu 1 299 -10 1464 208 36 11 chr2 143008822 143009101 -110247482 + AluJo SINE Alu 1 286 -26 776 320 36 8 chr2 143010520 143010879 -110245704 - L1PA12 LINE L1 -7202 379 11 263 239 64 37 chr2 143010885 143010994 -110245589 + L1M4 LINE L1 2222 2333 -3813 2330 227 72 45 chr2 143010995 143012342 -110244241 - MER89-int LTR ERV1 -2818 3983 364 5364 273 63 72 chr2 143012368 143013211 -110243372 - MER89-int LTR ERV1 -4530 2271 1422 3075 42 5 0 chr2 143013211 143013589 -110242994 - L1PA5 LINE L1 -8 6146 5767 5364 273 63 72 chr2 143013589 143014858 -110241725 - MER89-int LTR ERV1 -5379 1422 179 2495 272 81 46 chr2 143014948 143015055 -110241528 + L2 LINE L2 1615 1717 -1597 347 60 20 0 chr2 143015055 143015105 -110241478 + (CA)n Simple_repeat Simple_repeat 2 52 0 2495 272 81 46 chr2 143015105 143016026 -110240557 + L2 LINE L2 1717 2679 -635 442 363 40 15 chr2 143016019 143016220 -110240363 + L2 LINE L2 2891 3096 -217 * 35 24 0 0 chr2 143016228 143016270 -110240313 + AT_rich Low_complexity Low_complexity 1 42 0 366 78 90 18 chr2 143016282 143016448 -110240135 + (TA)n Simple_repeat Simple_repeat 2 179 0 584 242 72 31 chr2 143016460 143016654 -110239929 + L2 LINE L2 3107 3308 -5 432 51 0 0 chr2 143019509 143019568 -110237015 + (TG)n Simple_repeat Simple_repeat 1 59 0 207 88 0 0 chr2 143019616 143019650 -110236933 + (TTTTTA)n Simple_repeat Simple_repeat 1 34 0 288 261 0 0 chr2 143019744 143019809 -110236774 + L2 LINE L2 3249 3313 0 267 305 47 31 chr2 143020321 143020449 -110236134 + MLT1J LTR MaLR 68 197 -314 227 200 0 60 chr2 143020612 143020662 -110235921 + MLT1J1 LTR MaLR 400 446 0 2353 24 14 3 chr2 143021419 143021710 -110234873 - L1PA2 LINE L1 -55 6100 5807 1582 192 34 82 chr2 143023048 143023486 -110233097 + MER47B DNA MER2_type 2 418 0 460 208 63 0 chr2 143023802 143024021 -110232562 - L1MA4A LINE L1 -23 6280 5987 22 56 0 0 chr2 143024100 143024136 -110232447 + AT_rich Low_complexity Low_complexity 1 36 0 401 311 25 0 chr2 143025948 143026067 -110230516 + MIR SINE MIR 88 209 -53 522 299 100 58 chr2 143026113 143026701 -110229882 - MLT1L LTR MaLR -2 613 1 610 236 166 0 chr2 143026847 143027004 -110229579 - MER5A DNA MER1_type 0 189 7 10143 31 1 1 chr2 143028025 143029988 -110226595 - L1PA4 LINE L1 -65 6090 4126 2140 19 0 0 chr2 143029982 143030241 -110226342 + L1PA4 LINE L1 3886 4144 -2002 * 249 268 0 0 chr2 143030337 143030408 -110226175 - MLT1K LTR MaLR -32 556 486 195 129 0 0 chr2 143030733 143030764 -110225819 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 194 360 40 0 chr2 143031071 143031171 -110225412 + MIR SINE MIR 92 195 -67 499 274 32 8 chr2 143031550 143031674 -110224909 - MER5A DNA MER1_type 0 189 63 2606 216 8 20 chr2 143032450 143033085 -110223498 + L1PA16 LINE L1 4547 5173 -973 500 0 17 0 chr2 143033085 143033145 -110223438 + (CAAAA)n Simple_repeat Simple_repeat 1 61 0 4498 134 14 1 chr2 143033146 143033860 -110222723 + L1PA16 LINE L1 5443 6165 -1 1588 233 12 16 chr2 143034649 143035107 -110221476 - MER89 LTR ERV1 0 559 5 1512 191 64 3 chr2 143035113 143035614 -110220969 - MER89-int LTR ERV1 -3 6798 6226 2271 144 47 7 chr2 143035629 143036032 -110220551 + MSTA LTR MaLR 10 428 0 3219 206 27 23 chr2 143036032 143036119 -110220464 - MER89-int LTR ERV1 -571 6230 6145 5121 132 29 13 chr2 143036119 143037440 -110219143 + L1PB3 LINE L1 4802 6147 -7 3219 206 27 23 chr2 143037440 143038093 -110218490 - MER89-int LTR ERV1 -656 6145 5487 586 133 0 57 chr2 143038108 143038213 -110218370 + FLAM_C SINE Alu 33 131 -12 2059 249 53 50 chr2 143038225 143038960 -110217623 - MER89-int LTR ERV1 -1952 4849 4113 1174 111 6 17 chr2 143038964 143039144 -110217439 - AluSg/x SINE Alu 0 312 135 259 280 56 32 chr2 143039147 143039272 -110217311 - MER89-int LTR ERV1 -2682 4119 3992 10294 221 29 42 chr2 143039292 143043163 -110213420 - L1PA16 LINE L1 0 6166 2370 2117 110 14 0 chr2 143043163 143043453 -110213130 + AluSx SINE Alu 1 294 -18 10294 221 29 42 chr2 143043453 143044125 -110212458 - L1PA16 LINE L1 -3796 2370 1690 359 285 0 116 chr2 143044295 143044467 -110212116 + MER5A DNA MER1_type 17 168 -21 396 257 271 0 chr2 143045706 143045846 -110210737 - MER5A DNA MER1_type 0 189 12 1016 194 6 0 chr2 143045916 143046091 -110210492 - MER20 DNA MER1_type -43 176 1 823 244 39 39 chr2 143046091 143046345 -110210238 + MIR SINE MIR 9 262 0 242 207 29 130 chr2 143047007 143047128 -110209455 + MIR SINE MIR 3 120 -88 663 293 36 40 chr2 143047839 143048092 -110208491 - MIR SINE MIR -4 258 7 238 297 94 14 chr2 143048830 143048901 -110207682 + L3 LINE CR1 1128 1192 -385 1827 159 0 29 chr2 143048901 143049210 -110207373 + AluJb SINE Alu 1 300 -12 238 297 94 14 chr2 143049210 143049276 -110207307 + L3 LINE CR1 1192 1276 -301 435 307 100 21 chr2 143049298 143049539 -110207044 - MIR SINE MIR 0 262 3 250 301 0 58 chr2 143049545 143049648 -110206935 + L3 LINE CR1 1274 1370 -207 237 273 0 0 chr2 143049999 143050054 -110206529 + L3 LINE CR1 1316 1370 -207 446 352 55 47 chr2 143050208 143050572 -110206011 - L2 LINE L2 -683 2631 2265 421 280 24 8 chr2 143051228 143051353 -110205230 + MIR3 SINE MIR 82 208 0 2392 68 7 3 chr2 143052773 143053069 -110203514 - AluY SINE Alu -10 301 5 1077 301 125 15 chr2 143053085 143053860 -110202723 - L2 LINE L2 -17 3296 2447 190 286 57 0 chr2 143053877 143053947 -110202636 - L2 LINE L2 -970 2344 2271 477 257 59 55 chr2 143054138 143054305 -110202278 + MLT1I LTR MaLR 207 377 -32 192 40 0 0 chr2 143054305 143054330 -110202253 + (TTA)n Simple_repeat Simple_repeat 1 25 0 477 257 59 55 chr2 143054330 143054364 -110202219 + MLT1I LTR MaLR 377 409 0 225 391 68 14 chr2 143054364 143054584 -110201999 - L2 LINE L2 -1062 2252 2021 311 322 168 40 chr2 143054849 143055051 -110201532 + L2 LINE L2 3045 3272 0 239 350 100 33 chr2 143055199 143055319 -110201264 - L2 LINE L2 -5 3267 3140 4773 100 304 88 chr2 143055608 143057012 -110199571 + pTR5 LTR ERV1 377 2438 0 660 279 103 31 chr2 143057016 143057306 -110199277 - L2 LINE L2 -3 3310 3000 219 285 295 37 chr2 143058302 143058600 -110197983 + L2 LINE L2 2587 2961 -353 852 304 36 4 chr2 143058633 143058886 -110197697 + MIR SINE MIR 2 262 0 680 224 143 66 chr2 143058880 143059166 -110197417 + L2 LINE L2 3004 3311 -2 * 230 241 155 0 chr2 143061573 143061631 -110194952 - L2 LINE L2 -50 3222 3156 213 319 0 0 chr2 143063869 143063938 -110192645 + CT-rich Low_complexity Low_complexity 1 69 0 212 182 0 18 chr2 143064650 143064705 -110191878 + (TG)n Simple_repeat Simple_repeat 2 55 0 365 39 20 0 chr2 143065134 143065185 -110191398 + (TG)n Simple_repeat Simple_repeat 2 53 0 249 196 0 0 chr2 143067311 143067367 -110189216 + (TG)n Simple_repeat Simple_repeat 2 57 0 329 43 21 0 chr2 143067796 143067843 -110188740 + (TG)n Simple_repeat Simple_repeat 2 49 0 365 337 16 43 chr2 143072312 143072499 -110184084 - MIR SINE MIR -58 204 23 570 286 68 16 chr2 143073348 143073540 -110183043 + L3 LINE CR1 1334 1535 -42 442 236 71 39 chr2 143073541 143073668 -110182915 - MIR SINE MIR -13 249 119 1158 201 46 3 chr2 143073751 143074035 -110182548 - MER33 DNA MER1_type -22 302 7 261 257 170 29 chr2 143074291 143074462 -110182121 - L3b LINE CR1 -199 1384 1190 21 0 0 0 chr2 143075188 143075209 -110181374 + AT_rich Low_complexity Low_complexity 1 21 0 219 366 114 8 chr2 143075284 143075407 -110181176 - L2 LINE L2 -8 3264 3129 188 444 76 0 chr2 143075414 143075558 -110181025 + L2 LINE L2 3099 3253 -19 220 280 0 0 chr2 143077164 143077214 -110179369 + (CA)n Simple_repeat Simple_repeat 1 50 0 411 316 94 20 chr2 143077629 143077873 -110178710 + L2 LINE L2 1686 1947 -1367 409 326 53 77 chr2 143078699 143079036 -110177547 - MLT1H LTR MaLR -198 351 23 1592 214 89 79 chr2 143079071 143079424 -110177159 + MLT1E2 LTR MaLR 1 364 -262 416 34 0 17 chr2 143079424 143079483 -110177100 + (CAAAA)n Simple_repeat Simple_repeat 3 60 0 1592 214 89 79 chr2 143079483 143079749 -110176834 + MLT1E2 LTR MaLR 364 626 0 566 286 68 16 chr2 143080896 143081088 -110175495 + L3 LINE CR1 1334 1535 -42 460 228 71 39 chr2 143081089 143081216 -110175367 - MIR SINE MIR -13 249 119 1198 188 42 6 chr2 143081299 143081590 -110174993 - MER33 DNA MER1_type -22 302 1 259 257 170 29 chr2 143081842 143082013 -110174570 - L3b LINE CR1 -199 1384 1190 21 0 0 0 chr2 143082739 143082760 -110173823 + AT_rich Low_complexity Low_complexity 1 21 0 217 366 114 8 chr2 143082835 143082958 -110173625 - L2 LINE L2 -8 3264 3129 249 203 0 17 chr2 143085790 143085821 -110170762 + (TG)n Simple_repeat Simple_repeat 2 33 -26 987 213 37 81 chr2 143085821 143086202 -110170381 - MLT1A1 LTR MaLR 0 365 2 249 203 0 17 chr2 143086202 143086229 -110170354 + (TG)n Simple_repeat Simple_repeat 33 59 0 2104 114 7 23 chr2 143087012 143087318 -110169265 - AluSx SINE Alu -11 301 1 259 227 189 15 chr2 143088032 143088164 -110168419 + LTR33A LTR ERVL 260 414 -109 1465 170 36 12 chr2 143088324 143088654 -110167929 + L1MA8 LINE L1 5952 6289 -2 244 330 85 25 chr2 143088788 143088906 -110167677 + L2 LINE L2 3108 3232 -40 313 279 96 41 chr2 143089086 143089529 -110167054 - LTR33 LTR ERVL -2 521 37 250 333 85 30 chr2 143091500 143091665 -110164918 + MIR SINE MIR 48 221 -41 292 249 55 44 chr2 143091850 143092031 -110164552 - L1ME4a LINE L1 -11 6110 5928 380 302 82 36 chr2 143092059 143092348 -110164235 - L1MC4 LINE L1 -314 7728 7321 319 284 95 45 chr2 143092373 143092595 -110163988 - L1MC4 LINE L1 -594 7448 7216 849 179 0 35 chr2 143094622 143094823 -110161760 - L1MA4 LINE L1 -1 6299 6106 245 391 55 0 chr2 143094832 143094942 -110161641 - L2 LINE L2 -20 3252 3137 357 43 0 0 chr2 143095394 143095441 -110161142 + (TG)n Simple_repeat Simple_repeat 2 48 0 3769 157 46 40 chr2 143096644 143097428 -110159155 - L1MB8 LINE L1 -9 6169 5381 2329 168 39 11 chr2 143097504 143097969 -110158614 + L1MC1 LINE L1 5850 6327 -6 2725 217 22 22 chr2 143098026 143098716 -110157867 - L1ME1 LINE L1 -173 6062 5373 345 198 38 19 chr2 143098717 143098823 -110157760 - L1ME1 LINE L1 -890 5325 5218 3797 262 82 15 chr2 143098861 143100363 -110156220 - L1ME1 LINE L1 -2295 3920 2307 2177 204 49 18 chr2 143100363 143100853 -110155730 - MLT1D LTR MaLR 0 505 1 3797 262 82 15 chr2 143100853 143101167 -110155416 - L1ME1 LINE L1 -3908 2307 2016 21 36 0 0 chr2 143102118 143102146 -110154437 + AT_rich Low_complexity Low_complexity 1 28 0 288 0 0 0 chr2 143102267 143102299 -110154284 + (CA)n Simple_repeat Simple_repeat 1 32 0 279 260 40 50 chr2 143103756 143103856 -110152727 - MER20B DNA MER1_type -589 194 96 279 260 40 50 chr2 143105109 143105209 -110151374 - MER20B DNA MER1_type -589 194 96 261 0 0 0 chr2 143107413 143107442 -110149141 + (GA)n Simple_repeat Simple_repeat 2 30 0 181 317 143 19 chr2 143107533 143107694 -110148889 + L2 LINE L2 2936 3116 -156 207 305 21 32 chr2 143107832 143107927 -110148656 - MIR3 SINE MIR 0 208 115 274 58 58 0 chr2 143109298 143109350 -110147233 + (TTATA)n Simple_repeat Simple_repeat 4 58 0 2710 184 14 21 chr2 143110859 143111376 -110145207 - MLT2B1 LTR ERVL 0 520 8 321 258 153 8 chr2 143111455 143111579 -110145004 + MIR SINE MIR 56 197 -65 404 37 19 0 chr2 143111662 143111716 -110144867 + (CA)n Simple_repeat Simple_repeat 1 55 0 280 236 0 0 chr2 143112427 143112482 -110144101 + LTR33 LTR ERVL 84 138 -383 506 259 0 76 chr2 143112825 143113010 -110143573 + LTR33 LTR ERVL 1 171 -350 804 206 38 24 chr2 143113079 143113288 -110143295 + LTR33 LTR ERVL 305 516 -5 372 350 94 9 chr2 143113528 143113751 -110142832 + MIR SINE MIR 9 250 -12 4008 186 92 79 chr2 143113823 143114447 -110142136 - L1MC3 LINE L1 -7 7778 7164 284 239 0 28 chr2 143114447 143114518 -110142065 - MLT1F1 LTR MaLR -463 104 36 4008 186 92 79 chr2 143114518 143114788 -110141795 - L1MC3 LINE L1 -621 7164 6899 2478 64 3 0 chr2 143114788 143115084 -110141499 - AluY SINE Alu -14 297 1 4008 186 92 79 chr2 143115084 143115649 -110140934 - L1MC3 LINE L1 -886 6899 6215 1059 178 214 50 chr2 143115674 143115977 -110140606 - L1MC3 LINE L1 -1952 5833 5481 812 286 112 42 chr2 143116254 143116742 -110139841 - L2 LINE L2 0 3313 2793 408 247 11 0 chr2 143116798 143116887 -110139696 - MER5A DNA MER1_type -84 105 16 587 313 71 9 chr2 143116916 143117127 -110139456 - L2 LINE L2 -537 2777 2554 260 314 83 32 chr2 143117128 143117284 -110139299 + MER91A DNA MER1_type 2 165 -31 693 299 58 4 chr2 143118950 143119224 -110137359 + MER102a DNA MER1_type 33 321 -9 621 325 54 0 chr2 143119808 143120048 -110136535 - MIR SINE MIR 0 262 10 193 295 86 48 chr2 143121184 143121289 -110135294 - MIR SINE MIR -63 145 37 2251 83 0 23 chr2 143121658 143121959 -110134624 - AluY SINE Alu 0 311 18 1234 213 57 39 chr2 143122094 143122428 -110134155 + MER58B DNA MER1_type 2 341 0 1849 163 7 0 chr2 143123158 143123453 -110133130 - AluSx SINE Alu -7 305 9 747 264 70 25 chr2 143123719 143124033 -110132550 - L1ME4a LINE L1 -283 5838 5511 3696 36 17 2 chr2 143124492 143124962 -110131621 - L1PA2 LINE L1 -837 5309 4833 7549 17 1 0 chr2 143124962 143125835 -110130748 + L1PA2 LINE L1 5278 6152 -3 949 270 142 31 chr2 143127105 143127520 -110129063 + L2 LINE L2 2844 3304 -9 1705 245 58 58 chr2 143127542 143128261 -110128322 + L1MC4 LINE L1 7281 7999 -43 294 209 44 88 chr2 143129760 143129851 -110126732 - MIR SINE MIR -71 191 105 230 270 135 18 chr2 143130025 143130136 -110126447 + MER5A DNA MER1_type 41 164 -25 705 306 44 16 chr2 143131231 143131479 -110125104 - MIR SINE MIR 0 262 8 1422 210 7 108 chr2 143132488 143132840 -110123743 - MLT1D LTR MaLR -5 500 223 1947 138 10 0 chr2 143132840 143133130 -110123453 - AluSx SINE Alu -19 293 1 1422 210 7 108 chr2 143133130 143133333 -110123250 - MLT1D LTR MaLR -282 223 1 282 87 0 0 chr2 143135050 143135096 -110121487 + (GA)n Simple_repeat Simple_repeat 1 46 0 204 146 24 0 chr2 143135225 143135266 -110121317 + (TG)n Simple_repeat Simple_repeat 2 43 0 805 343 192 4 chr2 143135539 143136255 -110120328 + L2 LINE L2 2404 3264 -8 287 294 10 144 chr2 143136691 143136892 -110119691 - MIR3 SINE MIR -19 189 16 21 36 0 0 chr2 143137205 143137233 -110119350 + AT_rich Low_complexity Low_complexity 1 28 0 186 43 0 0 chr2 143137405 143137428 -110119155 + (CA)n Simple_repeat Simple_repeat 1 23 0 317 313 177 10 chr2 143138544 143138742 -110117841 - MIR SINE MIR 0 262 32 196 317 108 17 chr2 143139282 143139402 -110117181 + L2 LINE L2 3173 3303 -10 1659 179 139 47 chr2 143139410 143139456 -110117127 - MLT2B1 LTR ERVL -8 512 472 243 0 0 0 chr2 143139456 143139483 -110117100 + (TG)n Simple_repeat Simple_repeat 2 28 0 1659 179 139 47 chr2 143139483 143139905 -110116678 - MLT2B1 LTR ERVL -48 472 1 312 211 138 28 chr2 143140018 143140127 -110116456 - MIR SINE MIR -84 178 58 2358 86 3 0 chr2 143140364 143140667 -110115916 + AluY SINE Alu 1 304 -7 1891 265 111 68 chr2 143143820 143144987 -110111596 + L2 LINE L2 2053 3263 -50 355 269 129 21 chr2 143145181 143145367 -110111216 + MIR SINE MIR 9 214 -48 563 322 112 50 chr2 143147185 143147377 -110109206 - L2 LINE L2 -1 3271 3092 2344 111 0 0 chr2 143147377 143147683 -110108900 + AluSq SINE Alu 1 306 -7 563 322 112 50 chr2 143147683 143148078 -110108505 - L2 LINE L2 -180 3092 2643 513 284 98 19 chr2 143148294 143148509 -110108074 - MIR SINE MIR -8 254 23 2207 119 0 10 chr2 143148594 143148906 -110107677 + AluSc SINE Alu 1 309 0 328 338 15 8 chr2 143149025 143149158 -110107425 - L2 LINE L2 -976 2338 2205 399 312 68 34 chr2 143150026 143150231 -110106352 + MIR SINE MIR 41 252 -10 185 363 169 8 chr2 143150798 143150922 -110105661 - L2 LINE L2 -25 3247 3104 813 245 160 53 chr2 143151414 143151743 -110104840 - LTR33A LTR ERVL -2 521 126 336 24 0 0 chr2 143151743 143151784 -110104799 + (GA)n Simple_repeat Simple_repeat 2 42 0 813 245 160 53 chr2 143151784 143151923 -110104660 - LTR33A LTR ERVL -397 126 3 404 339 64 11 chr2 143151985 143152268 -110104315 + LTR16A LTR ERVL 78 375 -75 21 0 0 0 chr2 143153724 143153745 -110102838 + AT_rich Low_complexity Low_complexity 1 21 0 295 222 28 14 chr2 143155367 143155439 -110101144 - L3 LINE CR1 -17 1560 1488 877 211 27 5 chr2 143155538 143155723 -110100860 - MER5A DNA MER1_type 0 189 1 209 349 36 0 chr2 143156262 143156345 -110100238 - MIR SINE MIR -86 176 91 235 315 137 7 chr2 143156490 143156636 -110099947 - MIR SINE MIR -7 255 91 385 349 12 4 chr2 143157398 143157650 -110098933 - L1ME3A LINE L1 -250 5920 5667 360 333 75 20 chr2 143157706 143157961 -110098622 - L1ME3A LINE L1 -534 5636 5368 30 59 0 0 chr2 143157993 143158044 -110098539 + AT_rich Low_complexity Low_complexity 1 51 0 330 324 36 68 chr2 143158541 143158763 -110097820 - L1MEd LINE L1 -4938 1181 967 306 326 53 77 chr2 143158859 143159196 -110097387 - MLT1H LTR MaLR -198 351 23 1785 203 87 79 chr2 143159231 143159584 -110096999 + MLT1E2 LTR MaLR 1 363 -263 416 34 0 17 chr2 143159584 143159643 -110096940 + (CAAAA)n Simple_repeat Simple_repeat 3 60 0 1785 203 87 79 chr2 143159643 143159910 -110096673 + MLT1E2 LTR MaLR 363 626 0 354 171 0 0 chr2 143160302 143160372 -110096211 + (TG)n Simple_repeat Simple_repeat 1 70 0 3353 257 68 31 chr2 143160372 143161704 -110094879 - L1MC4 LINE L1 -197 7845 6465 792 283 115 54 chr2 143162607 143162701 -110093882 + L2 LINE L2 2735 2822 -491 2132 116 7 3 chr2 143162701 143162872 -110093711 - AluSx SINE Alu -7 305 131 401 0 20 0 chr2 143162872 143162921 -110093662 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 2132 116 7 3 chr2 143162921 143163051 -110093532 - AluSx SINE Alu -181 131 3 792 283 115 54 chr2 143163051 143163499 -110093084 + L2 LINE L2 2822 3311 -2 2126 121 7 7 chr2 143163799 143164097 -110092486 - AluSx SINE Alu -14 298 1 218 81 27 0 chr2 143164883 143164920 -110091663 + (CA)n Simple_repeat Simple_repeat 2 39 0 220 300 67 54 chr2 143165120 143165343 -110091240 - L3b LINE CR1 -204 1379 1154 1136 44 0 0 chr2 143167297 143167432 -110089151 - AluY SINE Alu -11 300 166 2054 233 187 28 chr2 143167542 143168299 -110088284 + L2 LINE L2 2133 3011 -302 330 289 24 0 chr2 143168299 143168382 -110088201 + L2 LINE L2 3229 3313 0 399 346 60 22 chr2 143168638 143168823 -110087760 - MIR SINE MIR -11 251 60 2412 224 58 4 chr2 143168988 143169502 -110087081 - MLT1F LTR MaLR 0 542 1 289 413 62 18 chr2 143169758 143170034 -110086549 - L2 LINE L2 -49 3223 2936 211 261 25 101 chr2 143170068 143170187 -110086396 + L2 LINE L2 2130 2239 -1075 241 132 0 0 chr2 143170747 143170785 -110085798 + 5S rRNA rRNA 1 38 -83 203 296 14 70 chr2 143171482 143171553 -110085030 - L2 LINE L2 -11 3302 3236 2143 111 16 0 chr2 143171818 143172124 -110084459 - AluY SINE Alu 0 311 1 292 206 16 0 chr2 143172382 143172445 -110084138 + LTR16A1 LTR ERVL 62 125 -332 393 269 199 54 chr2 143172453 143172750 -110083833 + L3 LINE CR1 1120 1459 -118 313 75 38 0 chr2 143175363 143175416 -110081167 + (CA)n Simple_repeat Simple_repeat 2 56 0 2235 114 0 0 chr2 143177065 143177363 -110079220 + AluSg SINE Alu 1 298 -12 1374 272 188 40 chr2 143177644 143178800 -110077783 - L2 LINE L2 -4 3309 1982 266 269 71 61 chr2 143179387 143179599 -110076984 - MLT1J LTR MaLR -21 490 277 258 215 51 25 chr2 143179715 143179794 -110076789 - MLT1J LTR MaLR -331 180 100 472 149 50 8 chr2 143179798 143179919 -110076664 + T-rich Low_complexity Low_complexity 5 130 0 767 137 13 105 chr2 143180000 143180153 -110076430 + AluSq SINE Alu 39 177 -136 813 103 17 0 chr2 143180209 143180325 -110076258 + AluSg/x SINE Alu 191 308 -1 186 237 8 119 chr2 143180692 143180810 -110075773 + MIR SINE MIR 90 194 -68 192 325 138 12 chr2 143180848 143180928 -110075655 - L3b LINE CR1 -8 1575 1486 293 310 41 35 chr2 143180980 143181125 -110075458 - MIR SINE MIR 0 262 117 202 306 48 40 chr2 143181165 143181289 -110075294 + MIR SINE MIR 21 145 -63 404 288 110 7 chr2 143181485 143181631 -110074952 + MIR SINE MIR 76 236 -26 21 36 0 0 chr2 143181829 143181857 -110074726 + AT_rich Low_complexity Low_complexity 1 28 0 2047 132 13 0 chr2 143182413 143182717 -110073866 + AluSx SINE Alu 1 308 -4 280 292 0 31 chr2 143184458 143184523 -110072060 + MER91 DNA MER1_type 127 189 -1 8180 39 2 0 chr2 143185199 143186963 -110069620 - L1PA5 LINE L1 -5 6149 4381 4362 53 2 0 chr2 143186963 143187543 -110069040 + L1P LINE L1 2211 2791 -3355 404 337 133 46 chr2 143187729 143188502 -110068081 + L2 LINE L2 2262 3104 -168 690 287 47 21 chr2 143191421 143191861 -110064722 - LTR33 LTR ERVL -2 519 42 265 260 21 98 chr2 143191929 143192164 -110064419 - L1MC4a LINE L1 -1897 5911 5695 1160 254 62 50 chr2 143192967 143193742 -110062841 - L2 LINE L2 -1 3312 2525 1128 168 34 10 chr2 143193747 143193956 -110062627 + MER20 DNA MER1_type 6 219 0 745 255 144 38 chr2 143193960 143194301 -110062282 - L2 LINE L2 -786 2528 2152 753 151 14 0 chr2 143194345 143194484 -110062099 - L1MB4 LINE L1 -4 6176 6036 270 0 0 0 chr2 143194574 143194604 -110061979 + (TG)n Simple_repeat Simple_repeat 1 30 0 2258 178 39 2 chr2 143194648 143195059 -110061524 + MSTB LTR MaLR 1 426 0 391 283 145 0 chr2 143195137 143195282 -110061301 + MIR SINE MIR 97 262 0 300 297 59 30 chr2 143196063 143196164 -110060419 + L2 LINE L2 3190 3293 -20 288 53 0 0 chr2 143196218 143196256 -110060327 + (TG)n Simple_repeat Simple_repeat 2 39 0 1212 266 106 80 chr2 143196478 143197578 -110059005 - HAL1 LINE L1 -26 2481 1412 1342 50 0 11 chr2 143197578 143197759 -110058824 + (TTC)n Simple_repeat Simple_repeat 2 180 0 1212 266 106 80 chr2 143197759 143197803 -110058780 - HAL1 LINE L1 -1095 1412 1371 2400 100 0 3 chr2 143197803 143198114 -110058469 - AluSx SINE Alu -2 310 1 1212 266 106 80 chr2 143198114 143198654 -110057929 - HAL1 LINE L1 -1136 1371 751 294 271 66 20 chr2 143198752 143198903 -110057680 - MLT1J1 LTR MaLR -2 444 287 703 266 123 57 chr2 143199052 143199567 -110057016 - MLT1G LTR MaLR 0 555 11 314 192 107 35 chr2 143199560 143199653 -110056930 - MLT1J LTR MaLR -236 187 82 * 572 309 69 59 chr2 143199969 143200358 -110056225 - HAL1 LINE L1 -2114 393 1 488 233 141 2 chr2 143201647 143201780 -110054803 + MIR SINE MIR 3 149 -63 24 32 0 0 chr2 143202062 143202093 -110054490 + AT_rich Low_complexity Low_complexity 1 31 0 198 235 12 99 chr2 143202454 143202535 -110054048 - MIR SINE MIR -70 192 119 234 0 0 0 chr2 143202786 143202812 -110053771 + (T)n Simple_repeat Simple_repeat 1 26 0 2933 224 68 12 chr2 143202877 143204200 -110052383 - L1MB7 LINE L1 -12 6172 4773 219 69 0 0 chr2 143204200 143204229 -110052354 + (TA)n Simple_repeat Simple_repeat 2 30 0 1118 182 0 48 chr2 143204229 143204438 -110052145 - AluJb SINE Alu -24 288 90 2846 91 168 169 chr2 143204468 143205420 -110051163 - LTR12 LTR ERV1 0 2428 57 537 250 108 0 chr2 143205428 143205640 -110050943 - L1MB7 LINE L1 -1596 4550 4316 595 88 0 0 chr2 143205663 143205743 -110050840 - AluS SINE Alu -232 80 1 2211 112 0 0 chr2 143205918 143206212 -110050371 - AluSc SINE Alu -15 294 1 214 28 28 28 chr2 143207715 143207751 -110048832 + (CA)n Simple_repeat Simple_repeat 1 36 0 253 315 98 11 chr2 143208446 143208538 -110048045 - L2 LINE L2 -6 3307 3208 222 316 25 13 chr2 143209660 143209739 -110046844 - MIR3 SINE MIR -11 197 118 249 253 57 89 chr2 143210347 143210505 -110046078 + MIR SINE MIR 90 242 -20 180 200 0 29 chr2 143210474 143210509 -110046074 + L2 LINE L2 3217 3250 -22 * 438 36 0 0 chr2 143211196 143211252 -110045331 + (TG)n Simple_repeat Simple_repeat 2 57 0 220 369 108 23 chr2 143212521 143212651 -110043932 - L2 LINE L2 -14 3258 3118 211 250 31 0 chr2 143213581 143213645 -110042938 + (TATATG)n Simple_repeat Simple_repeat 2 67 0 2190 133 7 0 chr2 143214210 143214518 -110042065 - AluSx SINE Alu 0 312 3 284 194 92 51 chr2 143215583 143215681 -110040902 - MIR SINE MIR -46 216 115 2042 138 0 7 chr2 143216176 143216466 -110040117 + AluSx SINE Alu 3 290 -22 193 337 0 58 chr2 143217936 143218022 -110038561 + MIR SINE MIR 13 93 -169 36 91 0 0 chr2 143218040 143218139 -110038444 + AT_rich Low_complexity Low_complexity 1 99 0 237 159 0 0 chr2 143219184 143219228 -110037355 + (TGGA)n Simple_repeat Simple_repeat 2 45 0 2210 99 13 29 chr2 143219310 143219624 -110036959 + AluSx SINE Alu 1 309 -3 278 282 0 0 chr2 143219733 143219811 -110036772 + MIR SINE MIR 80 157 -105 2726 85 3 0 chr2 143219816 143220170 -110036413 + THE1A LTR MaLR 1 355 0 5625 108 9 9 chr2 143220170 143221038 -110035545 + THE1A-int LTR MaLR 1 868 -712 7282 114 7 1 chr2 143221144 143222209 -110034374 + THE1A-int LTR MaLR 510 1580 0 2639 90 3 3 chr2 143222209 143222564 -110034019 + THE1A LTR MaLR 1 355 0 628 283 49 49 chr2 143223275 143223522 -110033061 - MIR SINE MIR -1 261 15 218 31 0 31 chr2 143223852 143223884 -110032699 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 244 358 130 24 chr2 143224120 143224327 -110032256 - MIR SINE MIR -12 250 22 214 343 161 15 chr2 143225857 143225994 -110030589 - MIR3 SINE MIR -16 192 36 6694 201 60 36 chr2 143227341 143228951 -110027632 - MER52A LTR ERV1 0 1755 1 561 184 10 0 chr2 143229069 143229167 -110027416 - FLAM_A SINE Alu -40 102 4 3827 208 25 10 chr2 143230693 143231842 -110024741 - L1MB2 LINE L1 -1 6170 5007 1369 142 129 0 chr2 143231842 143232075 -110024508 - AluSx SINE Alu -2 310 48 5573 222 30 11 chr2 143232116 143233594 -110022989 - L1MB2 LINE L1 -1174 4972 3467 487 76 0 13 chr2 143234071 143234150 -110022433 + L1PA13 LINE L1 6083 6160 -3 1839 189 3 3 chr2 143234152 143234464 -110022119 + AluJb SINE Alu 1 312 0 2259 140 25 0 chr2 143235793 143236150 -110020433 - MER47A DNA MER2_type 0 366 1 26 50 0 0 chr2 143238563 143238603 -110017980 + AT_rich Low_complexity Low_complexity 1 40 0 256 283 0 0 chr2 143238952 143239012 -110017571 + (TATATG)n Simple_repeat Simple_repeat 6 65 0 265 361 37 20 chr2 143239016 143239178 -110017405 - MIR3 SINE MIR -66 142 14 2387 122 35 37 chr2 143240127 143240562 -110016021 - Tigger2a DNA MER2_type 0 434 1 261 0 0 0 chr2 143240853 143240882 -110015701 + (TTCC)n Simple_repeat Simple_repeat 4 32 0 2154 122 0 13 chr2 143241005 143241317 -110015266 + AluSx SINE Alu 1 308 -4 397 316 94 6 chr2 143242959 143243130 -110013453 + MIR SINE MIR 29 214 -48 317 200 62 0 chr2 143243582 143243742 -110012841 + (TA)n Simple_repeat Simple_repeat 1 170 0 238 143 0 0 chr2 143243763 143243812 -110012771 - L1MB7 LINE L1 -9 6175 6127 5220 96 1 0 chr2 143243812 143244540 -110012043 + L1PB1 LINE L1 5418 6146 -5 529 237 47 6 chr2 143244707 143244876 -110011707 - L1MB8 LINE L1 -43 6135 5960 1920 154 31 3 chr2 143247794 143248144 -110008439 - L1PB4 LINE L1 -56 6100 5741 1305 167 0 0 chr2 143248211 143248409 -110008174 - AluJb SINE Alu -114 198 1 230 0 33 0 chr2 143248429 143248459 -110008124 + (TA)n Simple_repeat Simple_repeat 2 32 0 347 271 34 0 chr2 143248462 143248580 -110008003 - L1M4 LINE L1 -2060 4086 3965 25690 63 8 9 chr2 143248582 143252958 -110003625 - L1PA6 LINE L1 0 6154 1793 346 194 0 0 chr2 143252960 143253032 -110003551 - L1PA6 LINE L1 -4764 1382 1311 * 9864 152 16 19 chr2 143253030 143254833 -110001750 - L1P LINE L1 -4340 1806 11 23 54 0 0 chr2 143255032 143255069 -110001514 + AT_rich Low_complexity Low_complexity 1 37 0 200 335 27 21 chr2 143255920 143256108 -110000475 + L2 LINE L2 2687 2875 -439 207 100 0 0 chr2 143256553 143256583 -110000000 + (CA)n Simple_repeat Simple_repeat 2 31 0 300 235 12 12 chr2 143256675 143256756 -109999827 + (TATATG)n Simple_repeat Simple_repeat 2 82 0 369 250 9 19 chr2 143256770 143256878 -109999705 - MIR SINE MIR 0 262 156 531 270 132 58 chr2 143257217 143257595 -109998988 + MLT1I LTR MaLR 1 406 -3 519 230 30 7 chr2 143257722 143257857 -109998726 - MER5B DNA MER1_type 0 178 41 1561 63 0 0 chr2 143257859 143258064 -109998519 + L1P3 LINE L1 5578 5782 -390 2260 108 16 0 chr2 143258064 143258369 -109998214 + AluSg SINE Alu 1 310 0 878 42 0 25 chr2 143258416 143258534 -109998049 + L1PA8 LINE L1 6056 6170 -2 2260 113 3 7 chr2 143259944 143260254 -109996329 - AluSg SINE Alu -1 309 1 281 291 55 27 chr2 143262320 143262430 -109994153 - L2 LINE L2 -201 3071 2959 2354 66 10 3 chr2 143262522 143262825 -109993758 + AluY SINE Alu 1 305 -6 21 36 0 0 chr2 143262940 143262968 -109993615 + AT_rich Low_complexity Low_complexity 1 28 0 1448 76 5 35 chr2 143263844 143264042 -109992541 - AluY SINE Alu -117 194 3 699 50 30 0 chr2 143264042 143264141 -109992442 + AluY SINE Alu 209 310 -1 37 0 0 0 chr2 143264566 143264603 -109991980 + AT_rich Low_complexity Low_complexity 1 37 0 579 170 43 0 chr2 143264608 143264702 -109991881 + AluJb SINE Alu 200 297 -15 2269 128 0 0 chr2 143264757 143265063 -109991520 - AluSg SINE Alu -4 306 1 471 283 198 17 chr2 143265180 143265534 -109991049 + MLT1K LTR MaLR 110 527 -61 185 359 26 26 chr2 143265958 143266075 -109990508 + L3 LINE CR1 697 813 -764 594 288 143 67 chr2 143266365 143266841 -109989742 + L3 LINE CR1 852 1363 -214 1875 166 0 46 chr2 143268198 143268524 -109988059 - AluJb SINE Alu -1 311 1 242 247 0 14 chr2 143268893 143268966 -109987617 + AluS SINE Alu 1 72 -231 1706 219 52 40 chr2 143269415 143269913 -109986670 + MLT1D LTR MaLR 2 505 0 225 0 0 0 chr2 143269933 143269958 -109986625 + (T)n Simple_repeat Simple_repeat 1 25 0 1263 211 7 19 chr2 143270920 143271190 -109985393 + AluJo SINE Alu 31 297 -15 507 315 98 30 chr2 143271514 143271749 -109984834 + L2 LINE L2 1122 1372 -1942 924 169 0 0 chr2 143271829 143271971 -109984612 + FRAM SINE Alu 26 167 -9 633 304 93 46 chr2 143271991 143272246 -109984337 + L2 LINE L2 1527 1815 -1499 2247 104 0 33 chr2 143272246 143272553 -109984030 + AluSg SINE Alu 1 297 -13 633 304 93 46 chr2 143272553 143272758 -109983825 + L2 LINE L2 1815 2009 -1305 643 281 200 3 chr2 143272762 143273047 -109983536 - L2 LINE L2 -44 3269 2929 1764 198 3 0 chr2 143273747 143274040 -109982543 - AluJb SINE Alu -18 294 1 219 298 50 41 chr2 143274545 143274666 -109981917 + L2 LINE L2 3180 3301 -12 195 396 67 26 chr2 143274770 143275040 -109981543 + L2 LINE L2 2346 2626 -688 1167 265 72 31 chr2 143275366 143276276 -109980307 - L1ME3A LINE L1 -233 5937 4992 25 51 0 0 chr2 143276451 143276490 -109980093 + AT_rich Low_complexity Low_complexity 1 39 0 1016 278 71 65 chr2 143277216 143277705 -109978878 + HAL1 LINE L1 638 1136 -1371 1854 162 10 7 chr2 143277705 143278013 -109978570 + AluSx SINE Alu 1 309 -3 1016 278 71 65 chr2 143278013 143278441 -109978142 + HAL1 LINE L1 1136 1560 -947 225 373 8 8 chr2 143278593 143278727 -109977856 + HAL1 LINE L1 1734 1867 -640 328 311 104 12 chr2 143278989 143279153 -109977430 + HAL1 LINE L1 1989 2167 -340 288 0 0 0 chr2 143279163 143279195 -109977388 + (CA)n Simple_repeat Simple_repeat 2 33 0 215 125 25 0 chr2 143279196 143279236 -109977347 + (TA)n Simple_repeat Simple_repeat 2 42 0 377 281 91 24 chr2 143279461 143279671 -109976912 - MLT1L LTR MaLR -234 381 158 364 241 115 59 chr2 143279731 143280017 -109976566 + HAL1 LINE L1 2202 2503 -4 452 255 11 90 chr2 143280266 143280454 -109976129 + MER5B DNA MER1_type 3 175 -3 21942 173 35 22 chr2 143281724 143284149 -109972434 - L1PA10 LINE L1 -8 6475 4084 2410 58 41 0 chr2 143284149 143284443 -109972140 - AluY SINE Alu -5 306 1 21942 173 35 22 chr2 143284443 143285308 -109971275 - L1PA10 LINE L1 -2399 4084 3232 2241 117 16 0 chr2 143285308 143285615 -109970968 - AluSx SINE Alu 0 312 1 21942 173 35 22 chr2 143285615 143288582 -109968001 - L1PA10 LINE L1 -3251 3232 10 196 344 35 66 chr2 143289196 143289452 -109967131 + L2 LINE L2 2998 3245 -27 206 444 43 0 chr2 143289481 143289598 -109966985 - L2 LINE L2 -44 3228 3107 606 196 0 0 chr2 143289615 143289717 -109966866 - AluS SINE Alu -211 102 1 653 141 7 99 chr2 143289842 143289984 -109966599 - FLAM_C SINE Alu 0 133 5 606 49 0 0 chr2 143290851 143290933 -109965650 + (CA)n Simple_repeat Simple_repeat 2 83 0 2202 191 19 7 chr2 143291787 143292206 -109964377 + MSTB LTR MaLR 1 424 -2 8164 180 26 11 chr2 143292235 143293816 -109962767 + MSTB-int LTR MaLR 48 1651 0 1368 160 48 12 chr2 143293816 143294147 -109962436 + MSTB LTR MaLR 1 426 0 580 235 95 27 chr2 143295535 143295756 -109960827 - L1MB8 LINE L1 -1 6177 5942 548 302 154 61 chr2 143296369 143296765 -109959818 - L2 LINE L2 0 3313 2955 2312 161 29 21 chr2 143296765 143297186 -109959397 + MSTB LTR MaLR 3 426 0 548 302 154 61 chr2 143297186 143297456 -109959127 - L2 LINE L2 -358 2955 2577 387 345 7 14 chr2 143297613 143297755 -109958828 - MIR3 SINE MIR -24 184 44 241 379 48 0 chr2 143298716 143298819 -109957764 - L2 LINE L2 -36 3236 3129 21 0 0 0 chr2 143298906 143298927 -109957656 + AT_rich Low_complexity Low_complexity 1 21 0 655 319 81 12 chr2 143299959 143300279 -109956304 - LTR16C LTR ERVL 0 491 150 201 94 0 0 chr2 143301232 143301264 -109955319 + (CAA)n Simple_repeat Simple_repeat 2 33 0 211 259 17 0 chr2 143301449 143301507 -109955076 + (TA)n Simple_repeat Simple_repeat 1 59 0 2267 66 7 3 chr2 143301831 143302117 -109954466 + AluY SINE Alu 1 287 -24 207 345 63 97 chr2 143302131 143302337 -109954246 - MIR SINE MIR -16 246 48 224 200 0 0 chr2 143303902 143303942 -109952641 + CT-rich Low_complexity Low_complexity 1 40 0 1658 194 16 29 chr2 143303942 143304256 -109952327 - AluJo SINE Alu -2 310 1 27 0 0 0 chr2 143304308 143304335 -109952248 + AT_rich Low_complexity Low_complexity 1 27 0 207 229 66 0 chr2 143304811 143304872 -109951711 + CT-rich Low_complexity Low_complexity 2 66 0 192 232 145 0 chr2 143305383 143305452 -109951131 - MIR3 SINE MIR -18 190 112 270 81 0 0 chr2 143305872 143305909 -109950674 + (A)n Simple_repeat Simple_repeat 1 37 0 453 19 0 0 chr2 143306516 143306570 -109950013 + (CA)n Simple_repeat Simple_repeat 2 55 0 25 0 0 0 chr2 143308152 143308177 -109948406 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr2 143308425 143308449 -109948134 + AT_rich Low_complexity Low_complexity 1 24 0 411 303 67 22 chr2 143309881 143310059 -109946524 - MIR3 SINE MIR -6 202 17 21 36 0 0 chr2 143310490 143310518 -109946065 + AT_rich Low_complexity Low_complexity 1 28 0 321 265 76 70 chr2 143311308 143311493 -109945090 - MIR SINE MIR -26 236 51 480 35 0 0 chr2 143311900 143311958 -109944625 + (CA)n Simple_repeat Simple_repeat 1 58 0 24 0 0 0 chr2 143313414 143313438 -109943145 + AT_rich Low_complexity Low_complexity 1 24 0 2331 59 0 7 chr2 143313722 143314010 -109942573 + AluY SINE Alu 1 286 -25 423 0 0 0 chr2 143314010 143314057 -109942526 + (CATA)n Simple_repeat Simple_repeat 2 48 0 790 219 10 41 chr2 143316927 143317075 -109939508 - MER20 DNA MER1_type 0 219 77 2087 133 39 33 chr2 143317075 143317435 -109939148 - THE1B LTR MaLR -2 362 1 790 219 10 41 chr2 143317435 143317482 -109939101 - MER20 DNA MER1_type -142 77 30 192 331 41 41 chr2 143318112 143318233 -109938350 + L2 LINE L2 3102 3222 -50 493 209 127 117 chr2 143318292 143318575 -109938008 - L2 LINE L2 0 3313 3028 1017 210 19 0 chr2 143318992 143319206 -109937377 - MER20 DNA MER1_type -1 218 1 222 304 88 40 chr2 143319509 143319634 -109936949 + L2 LINE L2 3175 3305 -8 1398 214 47 19 chr2 143320769 143321134 -109935449 + L1MEc LINE L1 35 409 -5987 181 388 78 0 chr2 143321768 143321871 -109934712 - MIR SINE MIR -116 146 36 497 318 27 77 chr2 143322369 143322813 -109933770 + L2 LINE L2 2818 3239 -33 655 268 125 9 chr2 143323651 143323875 -109932708 - MIR SINE MIR -7 255 6 348 200 80 20 chr2 143324697 143324797 -109931786 - MER46C DNA MER2_type -231 107 2 2504 234 82 25 chr2 143325295 143326194 -109930389 - Charlie1 DNA MER1_type -1683 1078 128 284 309 0 0 chr2 143327338 143327419 -109929164 + L2 LINE L2 3190 3270 -2 465 309 63 22 chr2 143327434 143327657 -109928926 + MIR SINE MIR 1 232 -30 262 255 108 24 chr2 143327815 143327989 -109928594 - L2 LINE L2 -307 2965 2771 376 171 1 147 chr2 143328809 143328919 -109927664 + Charlie5 DNA MER1_type 1 74 -96 651 153 0 0 chr2 143328919 143329030 -109927553 - L1PB4 LINE L1 -2 6154 6044 376 171 1 147 chr2 143329030 143329078 -109927505 + Charlie5 DNA MER1_type 74 127 -43 311 194 39 48 chr2 143329075 143329178 -109927405 + Charlie5 DNA MER1_type 2234 2335 -277 * 1454 195 63 6 chr2 143329179 143329512 -109927071 - L1MD1 LINE L1 -49 6193 5842 1918 196 28 5 chr2 143329595 143329992 -109926591 - L1MD1 LINE L1 -498 5861 5456 1070 198 91 38 chr2 143329999 143330318 -109926265 + Charlie5 DNA MER1_type 2289 2624 0 1019 180 69 37 chr2 143330383 143330600 -109925983 - MER58A DNA MER1_type 0 224 1 817 283 151 24 chr2 143330654 143331110 -109925473 - LTR33A LTR ERVL -2 521 8 687 364 87 33 chr2 143332317 143333042 -109923541 + L2 LINE L2 2359 3128 -185 273 289 26 0 chr2 143333185 143333261 -109923322 - MLT1J2 LTR MaLR -125 325 248 314 295 20 22 chr2 143333266 143333402 -109923181 - MLT1J1 LTR MaLR -269 242 74 683 270 76 88 chr2 143334795 143335240 -109921343 - MLT1J2 LTR MaLR -10 440 1 480 261 7 35 chr2 143335264 143335406 -109921177 + L2 LINE L2 3174 3311 -2 547 286 122 11 chr2 143335429 143335618 -109920965 + MIR SINE MIR 48 257 -5 438 393 27 20 chr2 143336136 143336429 -109920154 - L2 LINE L2 -1 3271 2977 334 248 95 77 chr2 143336576 143336686 -109919897 - L1ME4a LINE L1 -174 5947 5840 2069 118 0 0 chr2 143336686 143336966 -109919617 - AluSx SINE Alu -12 300 21 334 248 95 77 chr2 143336966 143337077 -109919506 - L1ME4a LINE L1 -281 5840 5722 311 273 0 27 chr2 143337307 143337417 -109919166 + MER103 DNA DNA 59 165 -1 2162 100 27 15 chr2 143338210 143338539 -109918044 + L1PB3 LINE L1 5822 6154 0 2135 113 0 3 chr2 143338669 143338988 -109917595 + AluSx SINE Alu 1 318 0 377 293 9 0 chr2 143339099 143339205 -109917378 + L2 LINE L2 3190 3296 -17 275 321 31 63 chr2 143339371 143339429 -109917154 - MER117 DNA MER1_type -26 171 113 1705 179 6 41 chr2 143339429 143339748 -109916835 - AluJb SINE Alu -4 308 1 275 321 31 63 chr2 143339748 143339848 -109916735 - MER117 DNA MER1_type -84 113 18 198 381 29 19 chr2 143339919 143340024 -109916559 + L2 LINE L2 3136 3241 -31 1392 248 112 32 chr2 143340702 143341174 -109915409 - MLT1H LTR MaLR -3 546 37 1278 107 0 6 chr2 143341212 143341390 -109915193 - AluSc SINE Alu -6 303 127 3066 65 0 19 chr2 143341398 143341810 -109914773 - L1PA6 LINE L1 -2 6152 5749 465 68 17 0 chr2 143341810 143341869 -109914714 + L1P LINE L1 4915 4974 -1172 458 112 129 0 chr2 143341871 143341987 -109914596 - AluSc SINE Alu -173 136 6 309 248 10 69 chr2 143342322 143342379 -109914204 - AluSg/x SINE Alu -119 183 133 4553 66 2 14 chr2 143342379 143342999 -109913584 - L1PA8 LINE L1 0 6172 5561 309 248 10 69 chr2 143342999 143343042 -109913541 - AluSg/x SINE Alu -169 133 89 211 256 0 0 chr2 143345363 143345406 -109911177 + (TA)n Simple_repeat Simple_repeat 2 44 0 1096 200 24 9 chr2 143347304 143347514 -109909069 + MER20 DNA MER1_type 2 214 -5 233 350 29 19 chr2 143347631 143347734 -109908849 - MIR SINE MIR -128 134 31 2187 129 0 3 chr2 143348349 143348658 -109907925 - AluSg SINE Alu -1 309 2 222 259 44 15 chr2 143349400 143349535 -109907048 + (TA)n Simple_repeat Simple_repeat 2 140 0 250 134 12 73 chr2 143349577 143349659 -109906924 + (TATAA)n Simple_repeat Simple_repeat 4 80 0 340 210 90 20 chr2 143350438 143350538 -109906045 - MER103 DNA DNA -49 117 11 1822 151 37 66 chr2 143352445 143352823 -109903760 - Tigger7 DNA MER2_type -4 2583 2217 4266 172 36 11 chr2 143352823 143353573 -109903010 - Tigger7 DNA MER2_type -1718 769 1 412 314 29 116 chr2 143354111 143354414 -109902169 - L2 LINE L2 -16 3256 2928 2345 104 0 0 chr2 143354414 143354722 -109901861 + AluSq SINE Alu 1 308 -5 412 314 29 116 chr2 143354722 143355227 -109901356 - L2 LINE L2 -344 2928 2519 2032 172 72 81 chr2 143355377 143355879 -109900704 - LTR38B LTR ERV1 -21 589 91 1883 58 0 4 chr2 143355879 143356121 -109900462 - L1PA7 LINE L1 -2 6152 5912 2032 172 72 81 chr2 143356121 143356212 -109900371 - LTR38B LTR ERV1 -519 91 1 302 276 146 8 chr2 143357978 143358101 -109898482 + MIR3 SINE MIR 58 197 -11 23 33 0 0 chr2 143358709 143358739 -109897844 + AT_rich Low_complexity Low_complexity 1 30 0 256 341 11 11 chr2 143359220 143359308 -109897275 + L2 LINE L2 3185 3272 0 245 218 51 39 chr2 143360044 143360122 -109896461 - L3 LINE CR1 -5 1572 1494 22 70 0 0 chr2 143360364 143360407 -109896176 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr2 143361536 143361557 -109895026 + AT_rich Low_complexity Low_complexity 1 21 0 4974 59 0 12 chr2 143362736 143363379 -109893204 - L1PA8 LINE L1 -3 6169 5535 328 259 18 54 chr2 143364087 143364199 -109892384 - MIR SINE MIR -71 191 84 212 159 0 45 chr2 143365618 143365662 -109890921 + T-rich Low_complexity Low_complexity 6 47 0 555 189 45 15 chr2 143366425 143366557 -109890026 - L1MC2 LINE L1 -11 6613 6478 1280 219 50 38 chr2 143366619 143366962 -109889621 + MLT1A1 LTR MaLR 18 364 -1 1128 221 63 42 chr2 143366965 143367296 -109889287 - MLT1A1 LTR MaLR -18 347 10 8684 228 47 19 chr2 143367305 143371329 -109885254 - L1MC2 LINE L1 -143 6481 2343 27 0 0 0 chr2 143371329 143371356 -109885227 + AT_rich Low_complexity Low_complexity 1 27 0 6333 153 29 9 chr2 143371356 143373570 -109883013 - L1MA3 LINE L1 0 6305 4047 3800 217 78 68 chr2 143373586 143374158 -109882425 - L1MC2 LINE L1 -4089 2337 1772 2167 128 0 7 chr2 143374158 143374462 -109882121 - AluSx SINE Alu -10 302 1 3800 217 78 68 chr2 143374462 143376218 -109880365 - L1MC2 LINE L1 -4654 1772 20 185 189 42 0 chr2 143377805 143377900 -109878683 + (TA)n Simple_repeat Simple_repeat 1 99 0 229 224 13 13 chr2 143377965 143378041 -109878542 - L1MC4a LINE L1 -1617 6191 6116 1168 285 84 5 chr2 143378063 143378505 -109878078 - L1MC4a LINE L1 -1763 6045 5569 28 0 0 0 chr2 143378505 143378533 -109878050 + AT_rich Low_complexity Low_complexity 1 28 0 41771 39 5 9 chr2 143378533 143384708 -109871875 - L1PA4 LINE L1 -3 6152 2 6817 37 2 1 chr2 143384800 143385671 -109870912 - L1PA4 LINE L1 -6 6149 5278 3456 128 19 53 chr2 143385836 143386064 -109870519 + L1PA16 LINE L1 5104 5338 -828 1786 153 30 0 chr2 143386064 143386332 -109870251 + AluSp SINE Alu 1 276 -37 3456 128 19 53 chr2 143386332 143386903 -109869680 + L1PA16 LINE L1 5338 5888 -278 5059 40 0 0 chr2 143387007 143387664 -109868919 - L1P LINE L1 -830 5316 4660 979 306 53 41 chr2 143387823 143388390 -109868193 - L1M4 LINE L1 -2869 3277 2701 574 229 59 0 chr2 143388390 143388508 -109868075 + FLAM_A SINE Alu 2 126 -7 979 306 53 41 chr2 143388508 143388522 -109868061 - L1M4 LINE L1 -3445 2701 2689 26 74 0 0 chr2 143388569 143388623 -109867960 + AT_rich Low_complexity Low_complexity 1 54 0 300 278 77 19 chr2 143388677 143388936 -109867647 - L1P LINE L1 -3607 2539 2266 2012 135 0 7 chr2 143389172 143389486 -109867097 - AluSx SINE Alu 0 312 1 257 200 33 0 chr2 143389499 143389559 -109867024 + (TATATG)n Simple_repeat Simple_repeat 5 66 0 1746 174 0 43 chr2 143389559 143389858 -109866725 - AluSx SINE Alu -26 286 1 253 295 29 39 chr2 143390399 143390606 -109865977 - HAL1b LINE L1 -923 425 221 292 365 12 54 chr2 143391899 143392066 -109864517 + MIR3 SINE MIR 29 188 -20 382 282 54 62 chr2 143393530 143393789 -109862794 + HAL1 LINE L1 1 257 -2250 372 308 115 55 chr2 143393837 143394220 -109862363 + MLT1J2 LTR MaLR 45 450 0 479 307 97 36 chr2 143394330 143395021 -109861562 + HAL1 LINE L1 523 1255 -1252 473 290 132 18 chr2 143395028 143395300 -109861283 + L1ME3A LINE L1 4969 5271 -875 1955 116 32 55 chr2 143395409 143395720 -109860863 + AluSx SINE Alu 1 304 -8 994 210 52 0 chr2 143395783 143396016 -109860567 - MLT1D LTR MaLR -260 245 1 387 317 13 29 chr2 143396228 143396474 -109860109 + L1ME3A LINE L1 5638 5879 -299 28 29 0 0 chr2 143396505 143396540 -109860043 + AT_rich Low_complexity Low_complexity 1 35 0 4748 178 43 14 chr2 143396617 143396906 -109859677 + L1P5 LINE L1 4094 4373 -1778 204 40 0 0 chr2 143396906 143396931 -109859652 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 4748 178 43 14 chr2 143396931 143397302 -109859281 + L1P5 LINE L1 4373 4732 -1419 2150 134 3 3 chr2 143397302 143397607 -109858976 + AluSx SINE Alu 1 305 -7 4748 178 43 14 chr2 143397607 143398592 -109857991 + L1P5 LINE L1 4732 5782 -369 264 59 0 0 chr2 143398592 143398626 -109857957 + (TG)n Simple_repeat Simple_repeat 2 35 0 305 337 0 0 chr2 143398636 143398728 -109857855 - L1MC4 LINE L1 -1339 6703 6612 270 176 0 0 chr2 143398733 143398784 -109857799 + (TA)n Simple_repeat Simple_repeat 2 52 0 2393 113 5 13 chr2 143398784 143399103 -109857480 + L1PB1 LINE L1 5776 6093 -58 1805 133 11 4 chr2 143399103 143399381 -109857202 + AluSx SINE Alu 33 312 0 2393 113 5 13 chr2 143399381 143399440 -109857143 + L1PB1 LINE L1 6093 6151 0 31 0 0 0 chr2 143399440 143399471 -109857112 + AT_rich Low_complexity Low_complexity 1 31 0 1739 173 74 6 chr2 143400774 143400836 -109855747 - MLT1B LTR MaLR 0 390 334 288 0 0 0 chr2 143400836 143400868 -109855715 + (TTTTA)n Simple_repeat Simple_repeat 4 35 0 195 42 0 0 chr2 143400870 143400894 -109855689 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 1739 173 74 6 chr2 143400894 143401193 -109855390 - MLT1B LTR MaLR -56 334 1 24 53 0 0 chr2 143401440 143401478 -109855105 + AT_rich Low_complexity Low_complexity 1 38 0 1574 185 4 4 chr2 143401501 143401795 -109854788 + AluJb SINE Alu 27 320 0 1965 141 20 10 chr2 143401982 143402279 -109854304 - AluSx SINE Alu -9 303 4 641 218 73 53 chr2 143402663 143402869 -109853714 + MER63A DNA MER1_type 1 210 0 1086 44 0 0 chr2 143403108 143403243 -109853340 - L1PA4 LINE L1 -3 6152 6018 407 255 102 32 chr2 143403430 143403587 -109852996 + MIR SINE MIR 78 245 -17 1932 131 57 11 chr2 143403633 143403915 -109852668 + AluSx SINE Alu 1 295 -17 329 289 24 10 chr2 143404597 143404724 -109851859 + MIR SINE MIR 2 126 -136 195 255 0 85 chr2 143404724 143404771 -109851812 + L2 LINE L2 3209 3251 -21 329 289 24 10 chr2 143404771 143404786 -109851797 + MIR SINE MIR 126 262 0 436 269 64 21 chr2 143404795 143404936 -109851647 - MIR SINE MIR -68 194 48 1604 171 13 40 chr2 143405053 143405351 -109851232 - AluJo SINE Alu -22 290 1 355 380 46 5 chr2 143406066 143406261 -109850322 + MIR SINE MIR 45 247 -15 28 29 0 0 chr2 143406718 143406753 -109849830 + AT_rich Low_complexity Low_complexity 1 35 0 360 0 0 0 chr2 143407114 143407154 -109849429 + (CA)n Simple_repeat Simple_repeat 2 41 0 579 269 69 93 chr2 143407636 143408012 -109848571 - L2 LINE L2 -1 3312 2946 570 90 0 0 chr2 143409741 143409819 -109846764 - MADE1 DNA Mariner 0 80 3 272 270 0 0 chr2 143409945 143410008 -109846575 + L2 LINE L2 3251 3313 0 1895 151 3 19 chr2 143410373 143410685 -109845898 - AluSx SINE Alu -5 307 1 203 259 86 0 chr2 143410704 143410762 -109845821 + L2 LINE L2 3250 3312 -1 28830 102 14 24 chr2 143410809 143416888 -109839695 + L1PA7 LINE L1 371 6469 0 1190 307 91 35 chr2 143418320 143418665 -109837918 + L2 LINE L2 2441 2765 -548 3465 126 21 13 chr2 143418665 143419188 -109837395 - MER1A DNA MER1_type 0 527 1 1190 307 91 35 chr2 143419188 143419639 -109836944 + L2 LINE L2 2765 3313 0 1967 139 29 23 chr2 143420089 143420434 -109836149 + MER7A DNA MER2_type 1 345 -1 650 271 95 5 chr2 143420788 143420998 -109835585 + MIR SINE MIR 31 259 -3 201 74 0 0 chr2 143422107 143422134 -109834449 + (TG)n Simple_repeat Simple_repeat 2 28 0 242 328 188 0 chr2 143422236 143422364 -109834219 - MIR SINE MIR -108 154 3 2219 98 16 3 chr2 143422770 143423076 -109833507 - AluSp SINE Alu -3 310 1 24 0 0 0 chr2 143427140 143427164 -109829419 + AT_rich Low_complexity Low_complexity 1 24 0 2127 144 33 25 chr2 143428085 143428446 -109828137 - THE1B LTR MaLR 0 364 1 305 218 8 38 chr2 143429740 143429873 -109826710 + GA-rich Low_complexity Low_complexity 3 131 0 258 390 81 48 chr2 143432115 143432387 -109824196 + L2 LINE L2 2967 3247 -25 235 318 16 23 chr2 143433077 143433206 -109823377 + CT-rich Low_complexity Low_complexity 1 128 0 253 250 0 56 chr2 143433250 143433322 -109823261 + L2 LINE L2 3205 3272 0 1190 166 16 12 chr2 143434060 143434307 -109822276 - L1MA8 LINE L1 0 6291 6044 186 330 52 10 chr2 143434404 143434501 -109822082 + L2 LINE L2 2303 2403 -911 12296 130 8 19 chr2 143434517 143436579 -109820004 - Tigger1 DNA MER2_type -357 2061 24 1968 134 0 4 chr2 143436986 143437255 -109819328 + AluSx SINE Alu 13 280 -32 200 86 29 0 chr2 143437255 143437290 -109819293 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 285 296 96 32 chr2 143437726 143437851 -109818732 - MER5B DNA MER1_type 0 178 46 203 339 33 41 chr2 143437882 143438003 -109818580 - MIR3 SINE MIR -30 178 59 1777 166 10 14 chr2 143438785 143439080 -109817503 - AluJo SINE Alu -18 294 1 10136 31 0 0 chr2 143439722 143441696 -109814887 - L1PA3 LINE L1 -5 6150 4177 429 349 155 16 chr2 143441987 143442362 -109814221 - L3 LINE CR1 -2 1575 1149 451 264 157 25 chr2 143442793 143442952 -109813631 - MER5A DNA MER1_type -1 188 9 1202 181 6 78 chr2 143442952 143443300 -109813283 - MER33 DNA MER1_type 0 324 2 434 260 54 94 chr2 143443347 143443570 -109813013 - MIR SINE MIR -3 259 46 582 381 8 8 chr2 143444229 143444481 -109812102 + MIR SINE MIR 9 260 -2 2679 89 18 5 chr2 143445261 143445643 -109810940 + L1PA7 LINE L1 5762 6148 -6 2057 168 65 7 chr2 143445643 143446072 -109810511 - MER101 LTR ERV1 -12 462 9 704 203 128 78 chr2 143446555 143446728 -109809855 - L1ME2 LINE L1 -107 6057 5894 1689 182 29 26 chr2 143446728 143447074 -109809509 + MER7A DNA MER2_type 1 345 -1 704 203 128 78 chr2 143447074 143447245 -109809338 - L1ME2 LINE L1 -270 5894 5696 1447 176 47 27 chr2 143447245 143447501 -109809082 - AluJb SINE Alu -19 293 33 729 242 83 46 chr2 143447547 143447873 -109808710 - L1ME2 LINE L1 -481 5683 5346 274 308 100 21 chr2 143449717 143449957 -109806626 - L1ME LINE L1 -406 5715 5457 1033 281 77 39 chr2 143450011 143450578 -109806005 - L2 LINE L2 0 3313 2731 1097 202 45 12 chr2 143450713 143450822 -109805761 + L1MD2 LINE L1 6035 6139 -220 327 25 0 0 chr2 143450822 143450862 -109805721 + (CA)n Simple_repeat Simple_repeat 1 40 0 1097 202 45 12 chr2 143450862 143450999 -109805584 + L1MD2 LINE L1 6139 6289 -70 294 73 0 0 chr2 143451007 143451048 -109805535 + (TG)n Simple_repeat Simple_repeat 2 42 0 275 125 54 18 chr2 143451078 143451134 -109805449 + MER97c DNA MER1_type? 122 179 -911 1181 209 119 46 chr2 143451442 143451784 -109804799 - MSTD LTR MaLR 0 396 24 186 71 0 0 chr2 143451784 143451812 -109804771 + (TTG)n Simple_repeat Simple_repeat 1 28 0 1181 209 119 46 chr2 143451812 143451838 -109804745 - MSTD LTR MaLR -372 24 1 469 332 60 40 chr2 143451963 143452343 -109804240 - L1M4 LINE L1 -1950 4196 3809 402 281 36 109 chr2 143453402 143453594 -109802989 - MER91A DNA MER1_type -1 195 18 326 362 24 0 chr2 143453730 143453857 -109802726 - L2 LINE L2 0 3272 3143 244 321 37 18 chr2 143454254 143454363 -109802220 + MIR3 SINE MIR 82 192 -16 428 332 62 24 chr2 143455716 143455924 -109800659 + MIR SINE MIR 3 218 -44 486 280 38 38 chr2 143455950 143456186 -109800397 + MER106A DNA MER1_type 1 236 0 2709 94 11 5 chr2 143457340 143457713 -109798870 + THE1C LTR MaLR 1 375 0 9437 111 38 68 chr2 143457715 143459299 -109797284 + THE1C-int LTR MaLR 3 1537 -43 2357 99 3 3 chr2 143459299 143459612 -109796971 + AluSp SINE Alu 1 313 0 9437 111 38 68 chr2 143459612 143459655 -109796928 + THE1C-int LTR MaLR 1537 1580 0 2461 136 3 3 chr2 143459655 143460030 -109796553 + THE1C LTR MaLR 1 375 0 6235 125 39 58 chr2 143460032 143461275 -109795308 - Tigger3b DNA MER2_type -12 1219 1 180 0 0 0 chr2 143461346 143461366 -109795217 + (T)n Simple_repeat Simple_repeat 1 20 0 557 281 78 10 chr2 143461794 143461986 -109794597 + MIR SINE MIR 56 260 -2 21 0 0 0 chr2 143462732 143462753 -109793830 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 143463834 143463857 -109792726 + AT_rich Low_complexity Low_complexity 1 23 0 300 346 39 39 chr2 143465294 143465450 -109791133 + MIR3 SINE MIR 37 192 -16 295 308 34 68 chr2 143466370 143466453 -109790130 + L2 LINE L2 3195 3274 -39 2583 188 19 4 chr2 143466453 143466915 -109789668 - MER70A LTR ERVL 0 472 4 295 308 34 68 chr2 143466915 143466948 -109789635 + L2 LINE L2 3274 3307 -6 775 280 36 28 chr2 143466963 143467213 -109789370 + MIR SINE MIR 5 256 -6 1639 158 28 44 chr2 143468489 143468774 -109787809 + AluJo SINE Alu 1 282 -30 198 0 0 0 chr2 143468774 143468796 -109787787 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 1639 158 28 44 chr2 143468796 143468827 -109787756 + AluJo SINE Alu 282 312 0 216 0 0 0 chr2 143469955 143469979 -109786604 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2065 122 0 0 chr2 143469982 143470261 -109786322 - AluSg SINE Alu -31 279 1 553 318 25 8 chr2 143471571 143471896 -109784687 - MLT1K LTR MaLR -158 430 37 307 190 13 13 chr2 143472013 143472092 -109784491 + CT-rich Low_complexity Low_complexity 3 81 0 1594 88 0 0 chr2 143472122 143472316 -109784267 - AluSp SINE Alu -36 277 84 1732 180 16 103 chr2 143472578 143473090 -109783493 + MLT1C LTR MaLR 1 467 0 264 357 8 47 chr2 143473133 143473262 -109783321 - MIR SINE MIR -65 143 20 6309 41 1 0 chr2 143473623 143474381 -109782202 + L1PA5 LINE L1 5396 6154 0 279 133 0 0 chr2 143475102 143475147 -109781436 + (CA)n Simple_repeat Simple_repeat 2 46 0 1438 111 14 28 chr2 143476507 143476758 -109779825 - AluSg/x SINE Alu 0 312 85 288 313 112 32 chr2 143479165 143479414 -109777169 + MER102a DNA MER1_type 59 327 -3 225 263 18 0 chr2 143481137 143481194 -109775389 + CT-rich Low_complexity Low_complexity 3 60 0 321 183 0 135 chr2 143481418 143481522 -109775061 + MER21B LTR ERV1 1 90 -773 2660 227 102 20 chr2 143481544 143482231 -109774352 + MER21B LTR ERV1 19 761 -102 383 340 65 22 chr2 143482262 143482447 -109774136 + MIR SINE MIR 3 195 -67 409 325 32 10 chr2 143485911 143486313 -109770270 + LTR16C LTR ERVL 1 491 0 998 177 33 0 chr2 143486827 143487008 -109769575 - MER5A DNA MER1_type 0 189 3 2323 103 0 7 chr2 143487130 143487432 -109769151 + AluSc SINE Alu 3 302 -7 21 89 0 0 chr2 143488959 143489015 -109767568 + AT_rich Low_complexity Low_complexity 1 56 0 285 317 77 10 chr2 143489152 143489256 -109767327 + L2 LINE L2 2941 3051 -221 268 314 0 20 chr2 143489330 143489432 -109767151 + MLT1L LTR MaLR 144 243 -372 407 242 115 13 chr2 143489537 143489694 -109766889 + MLT1L LTR MaLR 441 613 -2 333 269 70 53 chr2 143489909 143490080 -109766503 - MIR SINE MIR -66 196 23 394 272 171 38 chr2 143490724 143490963 -109765620 + L3 LINE CR1 1237 1507 -70 284 328 51 28 chr2 143491012 143491189 -109765394 - MER20B DNA MER1_type -600 183 3 29 60 0 0 chr2 143491232 143491282 -109765301 + AT_rich Low_complexity Low_complexity 1 50 0 537 297 46 15 chr2 143492121 143492329 -109764254 + MIR SINE MIR 49 261 -1 501 176 38 75 chr2 143492513 143492672 -109763911 - L1MD3 LINE L1 -12 7983 7831 895 197 24 133 chr2 143493401 143493731 -109762852 - MLT1A1 LTR MaLR -71 294 1 234 324 18 36 chr2 143493736 143493847 -109762736 - MIR SINE MIR -113 149 41 5513 173 31 1 chr2 143494586 143496334 -109760249 - L1PA16 LINE L1 -2 6164 4366 238 167 0 0 chr2 143496318 143496360 -109760223 + L1 LINE L1 4376 4417 -1729 * 21 36 0 0 chr2 143497177 143497205 -109759378 + AT_rich Low_complexity Low_complexity 1 28 0 329 203 76 25 chr2 143497366 143497445 -109759138 + L2 LINE L2 3231 3313 0 243 282 251 25 chr2 143497471 143497634 -109758949 - MIR3 SINE MIR -8 200 1 242 229 82 41 chr2 143497819 143497941 -109758642 - MER103 DNA DNA -2 164 38 328 306 18 9 chr2 143498253 143498364 -109758219 - MER94 DNA DNA 0 134 23 21 36 0 0 chr2 143500650 143500678 -109755905 + AT_rich Low_complexity Low_complexity 1 28 0 372 268 61 55 chr2 143500893 143501057 -109755526 + L2 LINE L2 2896 3060 -212 460 284 125 23 chr2 143501133 143501440 -109755143 - L1ME4a LINE L1 -205 5916 5575 300 111 0 0 chr2 143502300 143502345 -109754238 + (TG)n Simple_repeat Simple_repeat 2 46 0 192 152 0 0 chr2 143502544 143502577 -109754006 + (TATG)n Simple_repeat Simple_repeat 3 35 0 892 180 34 0 chr2 143502631 143502837 -109753746 - L1MA7 LINE L1 0 6291 6079 258 317 110 7 chr2 143503222 143503367 -109753216 + MIR SINE MIR 39 198 -64 568 332 57 9 chr2 143503818 143504402 -109752181 - L1ME4a LINE L1 -1537 4609 3998 303 281 22 0 chr2 143504422 143504511 -109752072 + L1MC3 LINE L1 7674 7764 -21 230 156 0 0 chr2 143504554 143504599 -109751984 - LTR66 LTR ERVL -172 438 394 2659 229 35 12 chr2 143504599 143505286 -109751297 + L1MC4 LINE L1 6660 7362 -680 5215 130 20 33 chr2 143505291 143506237 -109750346 + Tigger4(Zombi) DNA MER2_type 1 2731 0 735 174 87 117 chr2 143506237 143506501 -109750082 + L1MC4 LINE L1 7367 7622 -420 249 299 11 11 chr2 143506508 143506595 -109749988 + L1MC4 LINE L1 7688 7774 -268 325 233 48 0 chr2 143506674 143506777 -109749806 + L1MC4 LINE L1 7935 8042 0 792 248 109 57 chr2 143509815 143509995 -109746588 - L1ME3A LINE L1 -8 6162 5993 1529 160 10 67 chr2 143509995 143510307 -109746276 - AluJo SINE Alu -17 295 2 792 248 109 57 chr2 143510307 143510529 -109746054 - L1ME3A LINE L1 -177 5993 5739 1224 169 27 71 chr2 143510558 143510854 -109745729 - L1MA8 LINE L1 -451 5840 5558 399 84 53 74 chr2 143510854 143510949 -109745634 + L1MA7 LINE L1 6198 6290 -1 898 240 42 52 chr2 143510974 143511486 -109745097 - L1ME3A LINE L1 -534 5636 5123 692 252 73 60 chr2 143511553 143512011 -109744572 + MLT1D LTR MaLR 5 467 0 281 186 54 0 chr2 143512189 143512318 -109744265 + (TAGA)n Simple_repeat Simple_repeat 3 138 0 273 261 95 104 chr2 143514534 143514756 -109741827 + L3 LINE CR1 1189 1408 -169 218 316 23 0 chr2 143515534 143515648 -109740935 - MIR SINE MIR -71 191 74 420 269 47 18 chr2 143515776 143515947 -109740636 - MER5B DNA MER1_type 0 178 3 292 373 25 12 chr2 143516539 143516700 -109739883 - MIR SINE MIR -86 176 14 192 374 48 0 chr2 143517074 143517157 -109739426 + L2 LINE L2 2971 3057 -215 455 128 92 119 chr2 143517198 143517307 -109739276 - LTR8A LTR ERV1 0 727 622 4658 71 28 0 chr2 143517307 143517925 -109738658 - PABL_A LTR ERV1 0 660 26 2462 179 64 54 chr2 143517940 143518548 -109738035 - LTR8A LTR ERV1 -113 614 1 1860 190 10 58 chr2 143519124 143519534 -109737049 + MLT1B LTR MaLR 1 390 0 306 0 0 0 chr2 143520671 143520705 -109735878 + (CA)n Simple_repeat Simple_repeat 2 35 0 216 320 13 13 chr2 143520940 143521018 -109735565 + MIR SINE MIR 74 151 -111 187 311 193 0 chr2 143521223 143521342 -109735241 - L2 LINE L2 -1 3312 3171 28 48 0 0 chr2 143521434 143521476 -109735107 + AT_rich Low_complexity Low_complexity 1 42 0 401 190 22 50 chr2 143522679 143522885 -109733698 + (TTATA)n Simple_repeat Simple_repeat 1 200 0 7148 49 3 2 chr2 143523776 143524671 -109731912 - L1PA7 LINE L1 -5 6149 5254 458 302 86 30 chr2 143526700 143526932 -109729651 - MIR SINE MIR -1 261 17 322 289 0 12 chr2 143527078 143527161 -109729422 - L2 LINE L2 -5 3308 3227 27 0 0 0 chr2 143527731 143527758 -109728825 + AT_rich Low_complexity Low_complexity 1 27 0 242 318 101 0 chr2 143529061 143529190 -109727393 - L2 LINE L2 0 3313 3172 3110 211 43 48 chr2 143529500 143530370 -109726213 + L1ME1 LINE L1 5111 5977 -189 2198 63 45 0 chr2 143530370 143530656 -109725927 + AluY SINE Alu 13 311 0 3110 211 43 48 chr2 143530656 143530829 -109725754 + L1ME1 LINE L1 5977 6149 -17 424 309 112 0 chr2 143530881 143531104 -109725479 + L1ME4a LINE L1 5586 5833 -288 192 292 37 62 chr2 143531511 143531672 -109724911 - MIR SINE MIR -64 198 42 1649 142 183 16 chr2 143533062 143533429 -109723154 + MSTA LTR MaLR 1 428 0 471 373 82 0 chr2 143533674 143533894 -109722689 + MIR SINE MIR 4 241 -21 190 259 74 62 chr2 143533917 143533998 -109722585 + MIR SINE MIR 173 254 -8 881 20 0 0 chr2 143533999 143534127 -109722456 - AluY SINE Alu 0 311 184 295 330 132 41 chr2 143534856 143535053 -109721530 + MIR SINE MIR 48 262 0 239 258 0 0 chr2 143535679 143535741 -109720842 + T-rich Low_complexity Low_complexity 1 62 0 25 65 0 0 chr2 143535793 143535839 -109720744 + AT_rich Low_complexity Low_complexity 1 46 0 2108 194 99 10 chr2 143536050 143536554 -109720029 + L1MB5 LINE L1 5616 6164 -10 342 351 53 13 chr2 143537246 143537397 -109719186 - MIR SINE MIR -16 246 90 338 240 48 16 chr2 143538355 143538480 -109718103 - MER103 DNA DNA -8 158 30 198 0 0 0 chr2 143538690 143538712 -109717871 + (TG)n Simple_repeat Simple_repeat 2 23 0 369 300 96 76 chr2 143538992 143539242 -109717341 + MIR SINE MIR 1 255 -7 201 338 0 15 chr2 143540930 143540998 -109715585 + MIR3 SINE MIR 12 78 -130 275 269 109 0 chr2 143543930 143544049 -109712534 + L2 LINE L2 3182 3313 0 2494 69 0 7 chr2 143546168 143546474 -109710109 + AluSq SINE Alu 1 304 -9 2958 3 0 0 chr2 143547874 143548192 -109708391 - AluYb8 SINE Alu 0 318 1 544 201 30 8 chr2 143548476 143548610 -109707973 - L1MD2 LINE L1 -14 6345 6209 1341 208 19 40 chr2 143549093 143549463 -109707120 - MLT1A1 LTR MaLR 0 365 4 231 188 0 0 chr2 143549806 143549854 -109706729 + CT-rich Low_complexity Low_complexity 2 49 0 1539 182 0 22 chr2 143549855 143550130 -109706453 - AluJo SINE Alu -19 293 25 425 255 25 83 chr2 143550195 143550399 -109706184 - HAL1 LINE L1 -1140 1367 1176 243 312 113 14 chr2 143550405 143550546 -109706037 + MIR SINE MIR 89 243 -19 180 111 0 0 chr2 143550712 143550739 -109705844 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2145 134 7 3 chr2 143550970 143551276 -109705307 + AluSc SINE Alu 1 307 -2 335 318 115 0 chr2 143551591 143551739 -109704844 + MIR3 SINE MIR 37 201 -7 483 244 22 30 chr2 143554241 143554376 -109702207 - MER5A DNA MER1_type -3 186 53 484 269 240 6 chr2 143554529 143554733 -109701850 + MIR SINE MIR 4 255 -7 262 388 8 0 chr2 143554960 143555081 -109701502 + L2 LINE L2 3185 3306 -7 434 254 201 0 chr2 143555191 143555325 -109701258 - MER5A DNA MER1_type 0 189 29 508 220 60 71 chr2 143555624 143555792 -109700791 - MER5B DNA MER1_type -2 176 11 245 292 97 26 chr2 143556246 143556359 -109700224 + MER5B DNA MER1_type 57 177 -1 460 279 157 7 chr2 143557147 143557287 -109699296 + MIR SINE MIR 23 183 -79 301 287 59 59 chr2 143557357 143557493 -109699090 + MER5B DNA MER1_type 42 177 -1 494 264 71 21 chr2 143557628 143557768 -109698815 + L2 LINE L2 3126 3272 0 30 45 0 0 chr2 143558562 143558606 -109697977 + AT_rich Low_complexity Low_complexity 1 44 0 328 314 35 35 chr2 143558947 143559116 -109697467 - MIR SINE MIR -78 184 16 185 307 11 57 chr2 143559240 143559328 -109697255 - MIR SINE MIR -56 206 123 792 110 0 0 chr2 143559586 143559713 -109696870 - L1MA7 LINE L1 0 6291 6165 312 117 83 0 chr2 143559714 143559774 -109696809 + L1MA7 LINE L1 6089 6153 -138 232 303 141 0 chr2 143559777 143559876 -109696707 - MIR SINE MIR -72 190 78 423 203 30 90 chr2 143559927 143560060 -109696523 - L2 LINE L2 -11 3261 3137 265 356 95 54 chr2 143560149 143560466 -109696117 + L2 LINE L2 2943 3272 0 232 263 18 0 chr2 143560680 143560737 -109695846 + (TTTG)n Simple_repeat Simple_repeat 3 60 0 369 288 135 18 chr2 143561018 143561181 -109695402 + MER5A DNA MER1_type 7 188 -1 301 305 38 53 chr2 143561067 143561198 -109695385 - MER5A DNA MER1_type -60 129 1 * 2343 101 3 3 chr2 143561326 143561634 -109694949 + AluSg SINE Alu 1 308 -2 837 176 36 6 chr2 143561771 143561936 -109694647 - AluJo SINE Alu -142 170 1 225 0 0 0 chr2 143562251 143562276 -109694307 + (T)n Simple_repeat Simple_repeat 1 25 0 205 313 89 9 chr2 143563915 143564027 -109692556 + MIR SINE MIR 40 160 -102 276 154 0 0 chr2 143564196 143564248 -109692335 + (TG)n Simple_repeat Simple_repeat 2 53 0 208 322 99 40 chr2 143564872 143565024 -109691559 + L2 LINE L2 2813 2973 -341 1062 181 112 0 chr2 143565061 143565266 -109691317 - AluJo SINE Alu -23 289 62 354 295 335 5 chr2 143565303 143565527 -109691056 + L2 LINE L2 3014 3311 -2 207 378 143 0 chr2 143565900 143566130 -109690453 - L2 LINE L2 -456 2858 2596 2098 151 118 0 chr2 143566168 143566551 -109690032 - MSTC LTR MaLR 0 428 1 396 207 200 21 chr2 143566848 143566988 -109689595 - MER45A DNA AcHobo 0 178 14 712 234 78 10 chr2 143567192 143567384 -109689199 + MIR SINE MIR 24 228 -34 391 262 65 30 chr2 143567482 143567650 -109688933 - L1M4 LINE L1 -964 5182 5009 430 265 79 142 chr2 143567710 143568008 -109688575 + L2 LINE L2 2841 3102 -211 6523 82 17 8 chr2 143568008 143569011 -109687572 - L1PA8 LINE L1 0 6172 5167 430 265 79 142 chr2 143569011 143569169 -109687414 + L2 LINE L2 3102 3268 -45 285 75 0 0 chr2 143569249 143569289 -109687294 + (TG)n Simple_repeat Simple_repeat 1 40 0 475 284 55 39 chr2 143569530 143569784 -109686799 + L1MC5 LINE L1 7618 7875 -86 1760 188 0 7 chr2 143569822 143570126 -109686457 + AluJb SINE Alu 3 304 -8 740 188 0 7 chr2 143570308 143570452 -109686131 - FLAM_C SINE Alu 0 143 1 244 327 126 6 chr2 143570712 143570871 -109685712 - MIR SINE MIR -6 256 79 377 235 15 96 chr2 143572114 143572250 -109684333 - MER5B DNA MER1_type -35 143 19 239 133 22 0 chr2 143572592 143572637 -109683946 + (TA)n Simple_repeat Simple_repeat 1 46 0 410 285 15 13 chr2 143572662 143572820 -109683763 - MIR SINE MIR -69 193 40 203 273 26 39 chr2 143573382 143573459 -109683124 + L2 LINE L2 3232 3307 -6 2365 83 13 0 chr2 143573587 143573887 -109682696 - AluY SINE Alu -7 304 1 26 0 0 0 chr2 143574140 143574166 -109682417 + AT_rich Low_complexity Low_complexity 1 26 0 3313 19 0 0 chr2 143574166 143574545 -109682038 - L1PA3 LINE L1 0 6155 5777 3043 17 0 0 chr2 143574546 143574907 -109681676 + L1PA3 LINE L1 5385 5745 -410 393 313 8 0 chr2 143575115 143575246 -109681337 + MER94 DNA DNA 3 134 0 444 361 44 0 chr2 143575516 143575696 -109680887 - MIR SINE MIR -32 230 43 371 300 59 29 chr2 143576933 143577112 -109679471 + MIR SINE MIR 56 237 -25 226 204 0 0 chr2 143577443 143577487 -109679096 - MER41B LTR ERV1 -2 633 590 2390 68 3 0 chr2 143577494 143577803 -109678780 - L1PA6 LINE L1 0 6154 5845 2673 79 3 0 chr2 143577805 143578173 -109678410 - MER41A LTR ERV1 -185 369 1 183 129 0 0 chr2 143578372 143578403 -109678180 + (CA)n Simple_repeat Simple_repeat 2 32 0 217 250 17 17 chr2 143578696 143578756 -109677827 + (TG)n Simple_repeat Simple_repeat 2 61 0 848 288 91 45 chr2 143579240 143579726 -109676857 - LTR33 LTR ERVL -13 508 1 462 251 60 68 chr2 143580176 143580411 -109676172 + HAL1 LINE L1 2268 2500 -7 329 101 93 0 chr2 143580714 143580853 -109675730 + (TA)n Simple_repeat Simple_repeat 2 153 0 405 0 0 0 chr2 143582365 143582410 -109674173 + (CA)n Simple_repeat Simple_repeat 2 46 0 23 0 0 0 chr2 143582489 143582512 -109674071 + AT_rich Low_complexity Low_complexity 1 23 0 290 310 11 0 chr2 143586283 143586370 -109670213 - MER91B DNA MER1_type -19 171 84 213 313 30 0 chr2 143586391 143586458 -109670125 - MER91B DNA MER1_type -72 118 50 264 315 67 51 chr2 143587180 143587434 -109669149 + HAL1 LINE L1 318 575 -1932 1091 283 87 42 chr2 143587557 143588362 -109668221 + HAL1 LINE L1 1375 2215 -292 1623 192 10 34 chr2 143588593 143588885 -109667698 + AluJo SINE Alu 1 285 -27 367 220 29 44 chr2 143589104 143589218 -109667365 + MLT1D LTR MaLR 5 117 -356 246 345 15 60 chr2 143589254 143589454 -109667129 - L1MEd LINE L1 -5574 545 355 183 42 0 0 chr2 143590691 143590715 -109665868 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 27584 38 3 1 chr2 143590747 143594925 -109661658 - L1PA4 LINE L1 0 6155 1968 2234 92 20 0 chr2 143595161 143595453 -109661130 + AluSq SINE Alu 1 298 -15 25 51 0 0 chr2 143596871 143596910 -109659673 + AT_rich Low_complexity Low_complexity 1 39 0 180 0 0 0 chr2 143598132 143598152 -109658431 + (TA)n Simple_repeat Simple_repeat 2 21 0 308 290 108 0 chr2 143598287 143598380 -109658203 + MIR SINE MIR 51 153 -109 21 0 0 0 chr2 143598973 143598994 -109657589 + AT_rich Low_complexity Low_complexity 1 21 0 1870 102 81 3 chr2 143599445 143599728 -109656855 - AluY SINE Alu -6 305 1 195 355 36 45 chr2 143600697 143600807 -109655776 + L2 LINE L2 3201 3309 -4 543 202 10 19 chr2 143601271 143601375 -109655208 + MER20 DNA MER1_type 2 104 -115 1577 199 17 3 chr2 143602484 143602776 -109653807 - AluJb SINE Alu -14 298 3 287 261 0 0 chr2 143602820 143602889 -109653694 + CT-rich Low_complexity Low_complexity 4 72 0 259 355 79 33 chr2 143603462 143603556 -109653027 + L2 LINE L2 3111 3216 -56 1505 158 107 32 chr2 143603556 143603640 -109652943 + MER44D DNA MER2_type 3 79 -2412 2374 107 0 0 chr2 143603640 143603948 -109652635 + AluSq SINE Alu 1 308 -5 1505 158 107 32 chr2 143603948 143604173 -109652410 + MER44D DNA MER2_type 79 605 -4 259 355 79 33 chr2 143604173 143604230 -109652353 + L2 LINE L2 3216 3269 -3 2147 128 0 0 chr2 143604816 143605113 -109651470 - AluSc SINE Alu -12 297 1 865 198 6 11 chr2 143606476 143606653 -109649930 + FRAM SINE Alu 1 176 0 2365 106 3 26 chr2 143606937 143607285 -109649298 + THE1A LTR MaLR 16 355 0 11421 95 20 1 chr2 143607289 143608835 -109647748 + THE1A-int LTR MaLR 5 1579 -1 460 83 0 0 chr2 143608836 143608896 -109647687 + THE1A LTR MaLR 1 60 -295 186 167 0 0 chr2 143609808 143609844 -109646739 + (TG)n Simple_repeat Simple_repeat 2 37 0 1541 274 248 53 chr2 143610672 143612139 -109644444 - L2 LINE L2 -10 3303 1561 1413 179 3 74 chr2 143612336 143612661 -109643922 - AluJo SINE Alu -10 302 1 22 0 0 0 chr2 143612701 143612723 -109643860 + AT_rich Low_complexity Low_complexity 1 22 0 181 357 27 0 chr2 143614490 143614602 -109641981 - MIR SINE MIR -72 190 76 25 51 0 0 chr2 143614657 143614696 -109641887 + GC_rich Low_complexity Low_complexity 1 39 0 342 127 0 0 chr2 143614696 143614767 -109641816 + (C)n Simple_repeat Simple_repeat 1 71 0 27 0 0 0 chr2 143614767 143614794 -109641789 + GC_rich Low_complexity Low_complexity 1 27 0 1609 155 0 43 chr2 143615123 143615401 -109641182 + AluJo SINE Alu 17 282 -30 534 300 66 35 chr2 143615526 143615883 -109640700 - MLT1K LTR MaLR -2 586 200 322 333 16 23 chr2 143616125 143616254 -109640329 + MIR SINE MIR 20 147 -115 1175 72 39 0 chr2 143616261 143616414 -109640169 - AluSq SINE Alu -5 308 150 462 307 97 56 chr2 143617163 143617648 -109638935 + MLT1J LTR MaLR 4 508 -3 20016 45 1 2 chr2 143618295 143621580 -109635003 + L1P LINE L1 1 3410 -2736 2495 126 8 10 chr2 143621689 143622077 -109634506 + THE1C-int LTR MaLR 1194 1580 0 2045 138 81 3 chr2 143622077 143622425 -109634158 + THE1C LTR MaLR 1 375 0 493 300 42 67 chr2 143622747 143623068 -109633515 + L2 LINE L2 2662 2979 -334 703 293 73 0 chr2 143623398 143623589 -109632994 - MER58A DNA MER1_type 0 224 20 435 83 0 0 chr2 143623614 143623674 -109632909 + (TC)n Simple_repeat Simple_repeat 1 60 0 1740 133 75 42 chr2 143624220 143624580 -109632003 + THE1C LTR MaLR 4 375 0 1571 87 22 4 chr2 143625055 143625286 -109631297 - AluY SINE Alu -76 235 1 3293 172 22 18 chr2 143625286 143625915 -109630668 - L1MA7 LINE L1 -151 6140 5509 633 90 0 0 chr2 143626049 143626138 -109630445 + (TCTA)n Simple_repeat Simple_repeat 4 92 0 242 83 0 0 chr2 143629463 143629499 -109627084 - HSMAR2 DNA Mariner -2 1300 1265 14524 70 1 0 chr2 143629601 143632361 -109624222 + L1PA6 LINE L1 3390 6154 0 181 206 0 0 chr2 143632371 143632405 -109624178 + MIR SINE MIR 117 150 -112 384 302 43 43 chr2 143633151 143633290 -109623293 + MIR3 SINE MIR 11 149 -59 235 245 0 0 chr2 143633496 143633545 -109623038 + MIR3 SINE MIR 150 198 -10 1280 212 13 65 chr2 143633559 143633945 -109622638 - MLT1A2 LTR MaLR -4 370 5 265 358 79 12 chr2 143634411 143634576 -109622007 + L2 LINE L2 2916 3091 -181 424 288 72 7 chr2 143634633 143634786 -109621797 + MIR SINE MIR 82 244 -18 206 343 37 19 chr2 143635950 143636058 -109620525 + MIR SINE MIR 127 236 -26 602 301 81 0 chr2 143636070 143636279 -109620304 - MIR SINE MIR -20 242 17 180 310 0 17 chr2 143637218 143637276 -109619307 + MIR SINE MIR 28 84 -178 201 329 37 24 chr2 143637884 143637966 -109618617 + L2 LINE L2 3190 3272 0 428 294 48 48 chr2 143639107 143639234 -109617349 + MIR SINE MIR 65 194 -68 243 79 0 0 chr2 143639234 143639272 -109617311 + (CA)n Simple_repeat Simple_repeat 1 38 0 428 294 48 48 chr2 143639272 143639331 -109617252 + MIR SINE MIR 193 251 -11 329 304 93 47 chr2 143639539 143639753 -109616830 - MLT1L LTR MaLR -240 375 152 341 297 14 20 chr2 143641107 143641255 -109615328 + CT-rich Low_complexity Low_complexity 3 149 0 186 43 0 0 chr2 143641925 143641948 -109614635 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2138 117 61 19 chr2 143642299 143642659 -109613924 + THE1C LTR MaLR 1 375 0 7067 124 54 13 chr2 143642659 143643024 -109613559 + THE1C-int LTR MaLR 1 350 -1230 1956 157 0 3 chr2 143643024 143643323 -109613260 - AluSg SINE Alu -12 298 1 7067 124 54 13 chr2 143643323 143644050 -109612533 + THE1C-int LTR MaLR 350 1138 -442 6416 133 93 131 chr2 143644053 143645818 -109610765 - pTR5 LTR ERV1 0 2438 742 228 286 62 54 chr2 143645979 143646091 -109610492 - MIR SINE MIR -149 113 1 353 291 146 0 chr2 143646118 143646221 -109610362 - MIR SINE MIR -12 250 133 867 225 22 6 chr2 143646223 143646405 -109610178 - MER58A DNA MER1_type -16 208 24 1299 184 67 105 chr2 143646567 143647045 -109609538 + MLT1C LTR MaLR 6 465 -2 21 0 0 0 chr2 143647211 143647232 -109609351 + AT_rich Low_complexity Low_complexity 1 21 0 230 237 72 52 chr2 143648000 143648097 -109608486 + MER69 DNA AcHobo 2426 2524 -2 773 188 30 12 chr2 143648335 143648500 -109608083 - Charlie8 DNA MER1_type -2143 274 107 192 158 0 0 chr2 143648519 143648557 -109608026 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 344 350 17 0 chr2 143649390 143649507 -109607076 - L2 LINE L2 -641 2673 2555 27 0 0 0 chr2 143649974 143650001 -109606582 + AT_rich Low_complexity Low_complexity 1 27 0 1152 243 98 37 chr2 143650200 143650579 -109606004 - MLT1I LTR MaLR -3 406 5 6113 134 31 10 chr2 143652357 143653707 -109602876 + L1MA4 LINE L1 4921 6293 -7 379 346 120 42 chr2 143655581 143656174 -109600409 - L2 LINE L2 -1668 1646 1008 2111 51 44 11 chr2 143656331 143656647 -109599936 + AluY SINE Alu 1 325 0 279 234 234 0 chr2 143656655 143656749 -109599834 - MER5B DNA MER1_type -62 116 1 237 366 53 45 chr2 143656797 143657152 -109599431 - L2 LINE L2 -525 2789 2432 1995 198 68 92 chr2 143657154 143657787 -109598796 - MLT1E1 LTR MaLR -4 650 33 331 344 99 0 chr2 143657788 143658000 -109598583 - L2 LINE L2 -888 2426 2194 258 164 0 0 chr2 143659122 143659177 -109597406 + (TA)n Simple_repeat Simple_repeat 2 56 0 21 36 0 0 chr2 143660970 143660998 -109595585 + AT_rich Low_complexity Low_complexity 1 28 0 525 181 43 0 chr2 143661015 143661131 -109595452 - L1MA7 LINE L1 -40 6251 6131 457 111 14 0 chr2 143661131 143661203 -109595380 - AluS SINE Alu -9 301 229 25583 57 43 3 chr2 143661339 143664737 -109591846 - L1P LINE L1 -2613 3533 2 1838 169 3 3 chr2 143664742 143665038 -109591545 - AluSx SINE Alu -16 296 1 3281 251 160 47 chr2 143665038 143666529 -109590054 - L1M2 LINE L1 -4388 2461 803 231 114 0 0 chr2 143667165 143667200 -109589383 + (T)n Simple_repeat Simple_repeat 1 35 0 208 328 16 0 chr2 143667721 143667785 -109588798 - MIR SINE MIR -63 145 81 31 58 0 0 chr2 143668026 143668078 -109588505 + AT_rich Low_complexity Low_complexity 1 52 0 2015 118 14 7 chr2 143668091 143668380 -109588203 + AluSq SINE Alu 12 302 -11 24 0 0 0 chr2 143668820 143668844 -109587739 + AT_rich Low_complexity Low_complexity 1 24 0 223 336 35 43 chr2 143669160 143669276 -109587307 - MER5A DNA MER1_type -18 171 57 1007 182 14 37 chr2 143669305 143669519 -109587064 + MER20 DNA MER1_type 6 214 -5 1334 110 0 0 chr2 143669785 143669985 -109586598 + L1PB1 LINE L1 5592 5791 -360 572 188 0 38 chr2 143669985 143670171 -109586412 + (TA)n Simple_repeat Simple_repeat 2 180 0 2237 135 11 6 chr2 143670193 143670555 -109586028 + L1PB1 LINE L1 5785 6148 -3 317 272 15 125 chr2 143671413 143671549 -109585034 + L2 LINE L2 3151 3271 -1 36 40 0 0 chr2 143673457 143673507 -109583076 + AT_rich Low_complexity Low_complexity 1 50 0 188 188 42 0 chr2 143673829 143673877 -109582706 + CT-rich Low_complexity Low_complexity 5 54 0 204 339 113 40 chr2 143673915 143674039 -109582544 - L2 LINE L2 -2 3270 3138 968 206 86 27 chr2 143674116 143674373 -109582210 - MLT1D LTR MaLR -10 495 224 631 316 73 44 chr2 143674375 143674997 -109581586 - L2 LINE L2 -219 3053 2420 638 258 6 18 chr2 143675462 143675625 -109580958 - AluJo SINE Alu -151 161 1 22 0 0 0 chr2 143675665 143675687 -109580896 + AT_rich Low_complexity Low_complexity 1 22 0 612 98 0 0 chr2 143675964 143676066 -109580517 + (TA)n Simple_repeat Simple_repeat 1 102 0 2919 47 8 0 chr2 143676120 143676482 -109580101 - L1PA7 LINE L1 -8 6146 5782 265 376 26 0 chr2 143676597 143676714 -109579869 - L2 LINE L2 0 3313 3194 21 57 0 0 chr2 143676714 143676749 -109579834 + AT_rich Low_complexity Low_complexity 1 35 0 400 298 0 8 chr2 143677380 143677504 -109579079 - HAL1 LINE L1 -825 1682 1560 1860 241 191 7 chr2 143677543 143678031 -109578552 - MLT2F LTR ERVL 0 663 58 2952 152 45 34 chr2 143678031 143678625 -109577958 - MER7C DNA MER2_type 0 602 2 1860 241 191 7 chr2 143678625 143678696 -109577887 - MLT2F LTR ERVL -605 58 1 207 176 0 0 chr2 143678810 143678844 -109577739 + (CAT)n Simple_repeat Simple_repeat 3 36 0 322 235 34 78 chr2 143680934 143681113 -109575470 - L1ME4a LINE L1 0 6121 5951 468 313 83 11 chr2 143681263 143681541 -109575042 - L1ME4a LINE L1 -422 5699 5402 308 271 51 89 chr2 143681551 143681765 -109574818 - L1ME4a LINE L1 -771 5375 5170 25 0 0 0 chr2 143681785 143681810 -109574773 + AT_rich Low_complexity Low_complexity 1 25 0 19503 34 1 0 chr2 143681810 143685996 -109570587 - L1PA3 LINE L1 -1 6154 1968 2247 92 20 0 chr2 143686231 143686523 -109570060 + AluSq SINE Alu 1 298 -15 25 51 0 0 chr2 143687941 143687980 -109568603 + AT_rich Low_complexity Low_complexity 1 39 0 180 0 0 0 chr2 143689202 143689222 -109567361 + (TA)n Simple_repeat Simple_repeat 2 21 0 290 283 120 0 chr2 143689358 143689450 -109567133 + MIR SINE MIR 51 153 -109 21 0 0 0 chr2 143690043 143690064 -109566519 + AT_rich Low_complexity Low_complexity 1 21 0 1883 99 85 3 chr2 143690515 143690798 -109565785 - AluY SINE Alu -5 306 1 197 354 39 0 chr2 143691736 143691866 -109564717 - L2 LINE L2 -1422 1892 1758 2170 139 0 0 chr2 143692067 143692370 -109564213 - AluSx SINE Alu -9 303 1 2360 91 13 0 chr2 143694118 143694427 -109562156 + AluSp SINE Alu 1 313 0 180 111 0 0 chr2 143694679 143694706 -109561877 + (T)n Simple_repeat Simple_repeat 1 27 0 443 352 131 19 chr2 143695096 143695780 -109560803 - L2 LINE L2 0 3272 2509 204 315 0 0 chr2 143696196 143696241 -109560342 + (TATATG)n Simple_repeat Simple_repeat 4 51 -25 1663 180 4 7 chr2 143696241 143696519 -109560064 + AluJo SINE Alu 6 282 -30 204 315 0 0 chr2 143696519 143696546 -109560037 + (TATATG)n Simple_repeat Simple_repeat 50 76 0 2168 141 0 0 chr2 143696573 143696871 -109559712 + AluSx SINE Alu 1 298 -14 21 71 0 0 chr2 143697219 143697261 -109559322 + AT_rich Low_complexity Low_complexity 1 42 0 225 0 0 0 chr2 143697464 143697489 -109559094 + (T)n Simple_repeat Simple_repeat 1 25 0 680 232 58 88 chr2 143697561 143697889 -109558694 + L2 LINE L2 2996 3313 0 370 365 118 7 chr2 143698138 143698426 -109558157 + L2 LINE L2 2952 3271 -1 1486 160 73 44 chr2 143699227 143699532 -109557051 - AluJo SINE Alu 0 313 1 289 354 94 16 chr2 143699968 143700222 -109556361 + L2 LINE L2 2550 2823 -491 2265 161 56 16 chr2 143700222 143700713 -109555870 - L1MA4 LINE L1 -4 6296 5783 1945 160 0 0 chr2 143700713 143701007 -109555576 - AluSx SINE Alu -18 294 1 2265 161 56 16 chr2 143701007 143701019 -109555564 - L1MA4 LINE L1 -517 5783 5773 339 216 0 14 chr2 143701019 143701093 -109555490 - LTR28 LTR ERV1 0 1020 948 2159 171 58 17 chr2 143701139 143701629 -109554954 - LTR27 LTR ERV1 -141 495 12 1949 144 44 0 chr2 143701636 143701977 -109554606 - L1MA4 LINE L1 -522 5778 5423 202 374 65 26 chr2 143702317 143702472 -109554111 + L2 LINE L2 3091 3251 -21 962 258 57 32 chr2 143702533 143702905 -109553678 - MLT1D LTR MaLR 0 505 125 2753 149 62 34 chr2 143702912 143703447 -109553136 - MER21A LTR ERV1 -6 925 376 1424 112 68 8 chr2 143703452 143703701 -109552882 - MER21A LTR ERV1 -667 264 1 318 250 52 0 chr2 143703715 143703811 -109552772 - MLT1D LTR MaLR -402 103 3 28 0 0 0 chr2 143704891 143704919 -109551664 + AT_rich Low_complexity Low_complexity 1 28 0 3776 221 23 36 chr2 143705016 143706159 -109550424 + L1MB8 LINE L1 4065 5192 -954 1679 160 9 26 chr2 143706171 143706515 -109550068 + L1MA9 LINE L1 3640 3977 -2169 2265 77 0 3 chr2 143706589 143706925 -109549658 + AluY SINE Alu 1 335 0 775 183 10 81 chr2 143706946 143707007 -109549576 - MER2 DNA MER2_type -150 195 131 2195 120 3 0 chr2 143707007 143707315 -109549268 - AluSx SINE Alu -3 309 1 775 183 10 81 chr2 143707315 143707450 -109549133 - MER2 DNA MER2_type -214 131 13 5807 181 37 35 chr2 143707485 143709797 -109546786 + L1MA9 LINE L1 3989 6312 0 3505 211 45 23 chr2 143709791 143710546 -109546037 + L1MB8 LINE L1 5188 5969 -209 * 1484 195 32 62 chr2 143710546 143710920 -109545663 + MLT1A1 LTR MaLR 3 365 0 3505 211 45 23 chr2 143710920 143711134 -109545449 + L1MB8 LINE L1 5969 6177 -1 263 297 11 11 chr2 143711195 143711286 -109545297 + (TA)n Simple_repeat Simple_repeat 2 92 0 1801 174 0 17 chr2 143711758 143712052 -109544531 + AluJo SINE Alu 1 289 -23 22 0 0 0 chr2 143712052 143712074 -109544509 + AT_rich Low_complexity Low_complexity 1 22 0 199 389 53 9 chr2 143712452 143712565 -109544018 - L2 LINE L2 -572 2742 2625 4542 132 42 13 chr2 143712788 143713545 -109543038 - MER4E LTR ERV1 0 779 1 24 0 0 0 chr2 143713874 143713898 -109542685 + AT_rich Low_complexity Low_complexity 1 24 0 2176 121 0 0 chr2 143713907 143714213 -109542370 + AluSc SINE Alu 1 306 -3 271 292 36 60 chr2 143714226 143714394 -109542189 - L3 LINE CR1 -302 1275 1112 469 319 104 31 chr2 143714763 143715051 -109541532 - L2 LINE L2 0 3313 3005 2049 128 10 0 chr2 143715150 143715446 -109541137 - AluSx SINE Alu -9 303 5 1185 320 109 21 chr2 143715575 143716228 -109540355 - L3 LINE CR1 -627 950 241 27 0 0 0 chr2 143717940 143717967 -109538616 + AT_rich Low_complexity Low_complexity 1 27 0 282 261 34 0 chr2 143718026 143718114 -109538469 - MIR SINE MIR 0 262 172 22 0 0 0 chr2 143719103 143719125 -109537458 + AT_rich Low_complexity Low_complexity 1 22 0 223 309 103 31 chr2 143719800 143719897 -109536686 + L2 LINE L2 3169 3272 0 996 256 179 42 chr2 143720213 143720426 -109536157 - HAL1 LINE L1 0 2507 2324 2071 149 0 0 chr2 143720426 143720721 -109535862 - AluSx SINE Alu -17 295 1 996 256 179 42 chr2 143720721 143721378 -109535205 - HAL1 LINE L1 -183 2324 1518 1081 303 103 19 chr2 143721404 143722209 -109534374 - HAL1 LINE L1 -1076 1431 559 252 0 0 0 chr2 143722275 143722303 -109534280 + (T)n Simple_repeat Simple_repeat 1 28 0 2075 132 51 0 chr2 143722303 143722636 -109533947 - MER4D LTR ERV1 -28 875 526 221 56 0 28 chr2 143722636 143722672 -109533911 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 7214 26 0 0 chr2 143722672 143724036 -109532547 - L1PA3 LINE L1 -24 6131 4768 183 80 0 0 chr2 143724103 143724128 -109532455 + (GGGA)n Simple_repeat Simple_repeat 1 25 0 563 281 67 16 chr2 143724217 143724470 -109532113 - HAL1 LINE L1 -2241 266 1 297 298 125 24 chr2 143724732 143724900 -109531683 - MIR3 SINE MIR -11 197 13 685 132 132 0 chr2 143727559 143727583 -109529000 - L1MB7 LINE L1 -12 6172 6153 2094 141 0 0 chr2 143727583 143727873 -109528710 - AluSg SINE Alu -18 292 3 685 132 132 0 chr2 143727873 143728000 -109528583 - L1MB7 LINE L1 -31 6153 6001 1034 199 45 32 chr2 143730079 143730300 -109526283 + AluJb SINE Alu 1 224 -88 558 261 22 6 chr2 143730478 143730658 -109525925 + MLT1D LTR MaLR 208 390 -115 2363 122 16 67 chr2 143730661 143731037 -109525546 + LTR18A LTR ERVL 1 357 0 2174 218 7 20 chr2 143731051 143731509 -109525074 + HERVL18 LTR ERVL 9 460 -5587 * 2193 218 22 9 chr2 143731499 143731958 -109524625 + HERVL18 LTR ERVL 1150 1614 -4433 1123 147 53 2 chr2 143731990 143732253 -109524330 + HERVL18 LTR ERVL 2119 2452 -3595 * 5404 150 1 2 chr2 143732252 143733112 -109523471 + HERVL18 LTR ERVL 2720 3578 -2469 598 129 21 0 chr2 143733115 143733208 -109523375 + HERVL18 LTR ERVL 4394 4488 -1559 317 237 0 0 chr2 143733208 143733267 -109523316 + HERVL18 LTR ERVL 5209 5267 -780 364 217 43 0 chr2 143733274 143733366 -109523217 + HERVL18 LTR ERVL 5952 6047 0 2358 120 16 67 chr2 143733432 143733808 -109522775 + LTR18A LTR ERVL 1 357 0 468 229 28 0 chr2 143733813 143733922 -109522661 + MLT1D LTR MaLR 394 505 0 1372 304 96 28 chr2 143735274 143735922 -109520661 + MER115 DNA AcHobo 2 693 0 212 308 9 47 chr2 143736200 143736307 -109520276 + L2 LINE L2 3201 3303 -10 263 313 188 0 chr2 143738162 143738290 -109518293 - MIR SINE MIR -27 235 84 12422 217 49 24 chr2 143738330 143739141 -109517442 - L1MA4A LINE L1 -4 6299 5510 278 65 0 22 chr2 143739141 143739187 -109517396 + (TA)n Simple_repeat Simple_repeat 2 46 0 12422 217 49 24 chr2 143739187 143741353 -109515230 - L1MA4A LINE L1 -793 5510 3247 2044 136 3 3 chr2 143741353 143741648 -109514935 + AluSg SINE Alu 1 295 -15 12422 217 49 24 chr2 143741648 143743088 -109513495 - L1MA4A LINE L1 -3056 3247 1844 3993 24 0 0 chr2 143743107 143743572 -109513011 - L1PA2 LINE L1 -1 6154 5690 229 245 106 0 chr2 143745131 143745225 -109511358 - L1MD3 LINE L1 -11 7984 7881 22 56 0 0 chr2 143745256 143745292 -109511291 + AT_rich Low_complexity Low_complexity 1 36 0 3034 213 66 22 chr2 143745294 143746108 -109510475 - L1MC4a LINE L1 -98 7710 6861 299 263 169 12 chr2 143746160 143746320 -109510263 - MLT1H1 LTR MaLR -5 562 378 398 313 125 28 chr2 143746383 143746599 -109509984 - MLT1H1 LTR MaLR -294 296 66 7715 189 26 59 chr2 143748516 143750904 -109505679 - L1MA7 LINE L1 0 6291 4065 261 0 0 0 chr2 143750904 143750933 -109505650 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 7715 189 26 59 chr2 143750933 143751672 -109504911 - L1MA7 LINE L1 -2226 4065 3303 357 225 11 11 chr2 143751712 143751801 -109504782 - MER20 DNA MER1_type 0 219 131 1372 117 29 19 chr2 143752256 143752462 -109504121 + MER1B DNA MER1_type 132 339 0 315 367 73 27 chr2 143753494 143753753 -109502830 + HAL1 LINE L1 1494 1764 -743 233 260 0 0 chr2 143754057 143754107 -109502476 + (CA)n Simple_repeat Simple_repeat 1 50 0 1438 207 52 6 chr2 143754280 143754642 -109501941 - L1MB2 LINE L1 0 6171 5793 246 62 0 0 chr2 143754674 143754706 -109501877 + (TC)n Simple_repeat Simple_repeat 1 32 0 1709 174 19 24 chr2 143754939 143755289 -109501294 - L1MB2 LINE L1 -374 5794 5486 271 190 17 0 chr2 143755289 143755347 -109501236 + MER58 DNA MER1_type 2362 2420 0 180 0 0 0 chr2 143755751 143755771 -109500812 + (T)n Simple_repeat Simple_repeat 1 20 0 195 100 0 0 chr2 143756899 143756929 -109499654 + (T)n Simple_repeat Simple_repeat 1 30 0 1218 332 59 42 chr2 143758533 143759386 -109497197 - L2 LINE L2 -337 2977 2111 1371 146 50 0 chr2 143760050 143760269 -109496314 - MER30 DNA MER1_type 0 230 1 213 39 0 0 chr2 143760351 143760377 -109496206 + (GGA)n Simple_repeat Simple_repeat 1 26 0 23 0 0 0 chr2 143761092 143761115 -109495468 + AT_rich Low_complexity Low_complexity 1 23 0 238 356 43 17 chr2 143762320 143762435 -109494148 + L2 LINE L2 3099 3216 -56 21 0 0 0 chr2 143762751 143762772 -109493811 + AT_rich Low_complexity Low_complexity 1 21 0 460 309 60 6 chr2 143763899 143764067 -109492516 + MIR SINE MIR 35 211 -51 238 313 69 21 chr2 143764680 143764926 -109491657 + MLT1F LTR MaLR 21 319 -230 594 28 0 0 chr2 143765130 143765202 -109491381 + (CA)n Simple_repeat Simple_repeat 2 73 0 183 42 0 0 chr2 143765606 143765630 -109490953 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 260 246 0 46 chr2 143766935 143767000 -109489583 + L2 LINE L2 3204 3265 -7 39618 75 5 7 chr2 143768444 143774127 -109482456 + L1P1 LINE L1 11 5680 -475 1483 180 13 3 chr2 143774580 143774886 -109481697 + AluYa5 SINE Alu 3 311 0 15599 26 4 2 chr2 143774918 143775235 -109481348 - L1P LINE L1 -2751 3395 3080 2884 13 0 0 chr2 143775235 143775551 -109481032 - AluYb8 SINE Alu -2 316 1 15599 26 4 2 chr2 143775551 143777133 -109479450 - L1P LINE L1 -3066 3080 1493 6848 23 0 1 chr2 143777130 143778510 -109478073 + L1PA3 LINE L1 4669 6047 -108 * 1582 277 55 25 chr2 143778651 143779105 -109477478 - HAL1 LINE L1 -1942 565 91 236 29 0 29 chr2 143779105 143779139 -109477444 + (TTA)n Simple_repeat Simple_repeat 2 34 0 1582 277 55 25 chr2 143779139 143779233 -109477350 - HAL1 LINE L1 -2416 91 1 182 313 30 30 chr2 143779233 143779300 -109477283 - L2 LINE L2 -1895 1419 1353 1753 73 5 0 chr2 143779587 143779848 -109476735 - AluY SINE Alu 0 311 71 298 355 22 14 chr2 143780043 143780181 -109476402 + L2 LINE L2 3171 3309 -4 2050 244 100 31 chr2 143780276 143780974 -109475609 - L1ME3A LINE L1 -3 6167 5422 487 291 96 35 chr2 143783173 143783403 -109473180 - MIR SINE MIR 0 262 19 234 284 86 17 chr2 143784652 143784768 -109471815 + MIR SINE MIR 83 206 -56 23 0 0 0 chr2 143785273 143785296 -109471287 + AT_rich Low_complexity Low_complexity 1 23 0 215 328 0 0 chr2 143785394 143785461 -109471122 + (TA)n Simple_repeat Simple_repeat 1 67 0 260 281 25 65 chr2 143787102 143787301 -109469282 - L1MC5 LINE L1 -71 7890 7700 300 188 171 0 chr2 143787362 143787479 -109469104 - LTR37B LTR ERV1 0 468 332 501 336 66 38 chr2 143787530 143788184 -109468399 + L1MEc LINE L1 235 906 -5657 312 272 122 14 chr2 143788409 143788556 -109468027 + L1MEc LINE L1 1180 1342 -5042 240 370 77 22 chr2 143788589 143788770 -109467813 - HAL1 LINE L1 -1868 639 449 624 244 133 59 chr2 143788774 143789045 -109467538 + MLT2B1 LTR ERVL 166 456 -64 259 125 0 0 chr2 143789091 143789131 -109467452 + MLT2D LTR ERVL 367 406 -8 375 322 89 7 chr2 143789159 143789429 -109467154 - HAL1 LINE L1 -2152 355 64 2199 158 74 22 chr2 143790167 143790572 -109466011 - MSTB LTR MaLR 0 426 1 21 57 0 0 chr2 143790818 143790853 -109465730 + AT_rich Low_complexity Low_complexity 1 35 0 1795 121 0 100 chr2 143790853 143791192 -109465391 + AluSx SINE Alu 1 305 -7 1257 7 0 0 chr2 143791194 143791333 -109465250 + AluYa5/8 SINE Alu 168 306 -4 24 0 0 0 chr2 143791333 143791357 -109465226 + AT_rich Low_complexity Low_complexity 1 24 0 1846 133 10 37 chr2 143791364 143791664 -109464919 + AluSx SINE Alu 2 293 -19 639 200 34 11 chr2 143791928 143792103 -109464480 + L1PA5 LINE L1 5963 6141 -13 333 0 0 0 chr2 143793986 143794023 -109462560 + (TG)n Simple_repeat Simple_repeat 2 38 0 1852 151 17 31 chr2 143796264 143796621 -109459962 + MLT1B LTR MaLR 20 371 -19 1341 267 5 34 chr2 143796623 143797031 -109459552 - MSTD LTR MaLR 0 396 1 500 234 35 43 chr2 143797065 143797331 -109459252 - MLT1A2 LTR MaLR -117 311 6 203 319 95 35 chr2 143797546 143797662 -109458921 - L2 LINE L2 -2 3311 3189 2080 162 56 17 chr2 143797685 143798127 -109458456 - LTR45B LTR ERV1 -19 603 10 1751 299 159 31 chr2 143798167 143798525 -109458058 - L2 LINE L2 -121 3192 2881 1537 156 12 16 chr2 143798525 143798819 -109457764 - AluSx SINE Alu 0 335 43 1751 299 159 31 chr2 143798819 143799713 -109456870 - L2 LINE L2 -432 2881 1713 299 324 0 41 chr2 143799762 143799866 -109456717 - HAL1 LINE L1 -1790 717 619 2031 148 32 27 chr2 143799866 143800239 -109456344 - THE1C LTR MaLR 0 375 1 299 324 0 41 chr2 143800239 143800279 -109456304 - HAL1 LINE L1 -1888 619 579 1234 207 98 30 chr2 143800282 143800649 -109455934 + MLT1D LTR MaLR 6 397 -108 2647 13 3 3 chr2 143800750 143801053 -109455530 - AluYa5 SINE Alu -8 303 1 260 248 44 9 chr2 143801271 143801384 -109455199 + (TA)n Simple_repeat Simple_repeat 1 117 0 2220 105 13 3 chr2 143802135 143802441 -109454142 + AluSc SINE Alu 1 309 0 1347 137 8 13 chr2 143803433 143803667 -109452916 - L1MC1 LINE L1 0 6333 6101 292 326 22 22 chr2 143805618 143805756 -109450827 + MIR SINE MIR 112 249 -13 2200 114 13 3 chr2 143805831 143806139 -109450444 + AluSq SINE Alu 1 311 -2 27 49 0 0 chr2 143808182 143808223 -109448360 + AT_rich Low_complexity Low_complexity 1 41 0 25 65 0 0 chr2 143808928 143808974 -109447609 + AT_rich Low_complexity Low_complexity 1 46 0 299 343 20 39 chr2 143809141 143809345 -109447238 - MIR3 SINE MIR -2 206 7 331 56 37 0 chr2 143810169 143810223 -109446360 + (CA)n Simple_repeat Simple_repeat 2 57 0 245 146 21 0 chr2 143810578 143810626 -109445957 + (TG)n Simple_repeat Simple_repeat 2 50 0 237 284 0 30 chr2 143811197 143811264 -109445319 - L2 LINE L2 -5 3308 3244 447 363 35 5 chr2 143813520 143813721 -109442862 + MIR SINE MIR 37 243 -19 219 114 0 0 chr2 143815308 143815343 -109441240 + (TATG)n Simple_repeat Simple_repeat 3 37 0 189 154 0 0 chr2 143815352 143815391 -109441192 + (CAGAGA)n Simple_repeat Simple_repeat 2 40 0 286 246 149 44 chr2 143816181 143816295 -109440288 - L1ME2 LINE L1 -10 6154 6029 254 369 47 20 chr2 143816569 143816718 -109439865 + MIR SINE MIR 20 172 -90 2344 97 0 7 chr2 143816735 143817044 -109439539 + AluSc SINE Alu 1 307 -2 327 179 0 0 chr2 143817953 143818020 -109438563 + GA-rich Low_complexity Low_complexity 4 70 0 324 317 102 27 chr2 143818023 143818209 -109438374 - LTR16B LTR ERVL -155 309 110 318 300 193 0 chr2 143818252 143818392 -109438191 - MER5A DNA MER1_type -14 175 9 1628 211 57 3 chr2 143818676 143819060 -109437523 - MER74A LTR ERVL -33 525 121 252 192 8 62 chr2 143820670 143820800 -109435783 + CT-rich Low_complexity Low_complexity 2 124 0 746 277 42 9 chr2 143820881 143821094 -109435489 + MIR SINE MIR 22 241 -21 560 181 52 0 chr2 143821229 143821345 -109435238 - FRAM SINE Alu -5 171 50 2179 45 7 45 chr2 143821367 143821659 -109434924 - AluY SINE Alu -10 301 21 668 190 17 6 chr2 143822207 143822381 -109434202 + CT-rich Low_complexity Low_complexity 2 177 0 367 243 114 21 chr2 143822546 143822686 -109433897 - L1M4b LINE L1 -5295 1564 1412 735 294 65 31 chr2 143822790 143823649 -109432934 - L1ME LINE L1 -3678 2966 2111 574 236 68 27 chr2 143823648 143823911 -109432672 - L1ME LINE L1 -4778 1868 1595 * 278 286 74 17 chr2 143823952 143824127 -109432456 - L1ME LINE L1 -4925 1617 1433 468 255 100 21 chr2 143824156 143824398 -109432185 - L1ME LINE L1 -5258 1284 1027 324 278 124 24 chr2 143824446 143824615 -109431968 - L1ME LINE L1 -5503 1131 946 616 125 11 0 chr2 143825115 143825203 -109431380 - 5S rRNA rRNA -31 90 2 1993 161 0 6 chr2 143825373 143825684 -109430899 - AluJb SINE Alu -3 309 1 503 213 33 53 chr2 143825751 143825901 -109430682 - MIR SINE MIR -30 232 86 22 35 0 0 chr2 143826905 143826934 -109429649 + AT_rich Low_complexity Low_complexity 1 29 0 3383 83 18 0 chr2 143827132 143827577 -109429006 + MLT2A2 LTR ERVL 1 453 0 31792 78 8 10 chr2 143827577 143831948 -109424635 + HERVL-A2 LTR ERVL 1 4362 -1292 2106 107 3 20 chr2 143831956 143832279 -109424304 + AluSg SINE Alu 1 310 0 219 69 0 0 chr2 143833282 143833311 -109423272 + (ATG)n Simple_repeat Simple_repeat 3 31 0 211 302 164 0 chr2 143833339 143833455 -109423128 - MIR SINE MIR -14 248 114 185 347 145 8 chr2 143835244 143835368 -109421215 + MIR3 SINE MIR 5 145 -63 276 277 43 21 chr2 143835389 143835483 -109421100 + L2 LINE L2 3173 3268 -4 257 273 20 50 chr2 143836777 143836876 -109419707 - MER5B DNA MER1_type -82 96 1 234 0 0 0 chr2 143839387 143839413 -109417170 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2094 135 0 7 chr2 143839415 143839712 -109416871 - AluSx SINE Alu -17 295 1 21 89 0 0 chr2 143839714 143839770 -109416813 + AT_rich Low_complexity Low_complexity 1 56 0 232 238 0 0 chr2 143840273 143840315 -109416268 + (TG)n Simple_repeat Simple_repeat 2 43 0 682 334 82 30 chr2 143840533 143841033 -109415550 + MLT1K LTR MaLR 40 565 -23 323 358 20 20 chr2 143841260 143841408 -109415175 + MIR SINE MIR 35 182 -80 237 379 32 0 chr2 143841691 143841786 -109414797 + MER5A DNA MER1_type 7 104 -85 224 391 78 17 chr2 143841914 143842093 -109414490 + L2 LINE L2 2868 3057 -215 201 129 0 0 chr2 143842252 143842283 -109414300 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 22 0 0 0 chr2 143842367 143842389 -109414194 + AT_rich Low_complexity Low_complexity 1 22 0 229 232 61 37 chr2 143844143 143844225 -109412358 + LTR16A1 LTR ERVL 68 151 -306 187 175 0 0 chr2 143845108 143845148 -109411435 + L2 LINE L2 3273 3312 -1 220 225 56 0 chr2 143845839 143845910 -109410673 + (TATATG)n Simple_repeat Simple_repeat 3 77 0 228 209 22 44 chr2 143845911 143846002 -109410581 - L1MC4 LINE L1 -1341 6701 6613 24 0 0 0 chr2 143846023 143846047 -109410536 + AT_rich Low_complexity Low_complexity 1 24 0 234 0 0 0 chr2 143847007 143847033 -109409550 + (CA)n Simple_repeat Simple_repeat 1 26 0 23 33 0 0 chr2 143847516 143847546 -109409037 + AT_rich Low_complexity Low_complexity 1 30 0 584 315 207 12 chr2 143848572 143848997 -109407586 - L2 LINE L2 -2 3311 2804 2222 68 58 0 chr2 143849797 143850089 -109406494 - AluY SINE Alu -2 309 1 23 33 0 0 chr2 143850553 143850583 -109406000 + AT_rich Low_complexity Low_complexity 1 30 0 41098 64 3 1 chr2 143851019 143857109 -109399474 - L1PA5 LINE L1 -4 6150 49 1941 129 25 4 chr2 143857435 143857754 -109398829 - AluSp SINE Alu 0 325 1 23 54 0 0 chr2 143857901 143857938 -109398645 + AT_rich Low_complexity Low_complexity 1 37 0 189 0 0 0 chr2 143859467 143859488 -109397095 + (T)n Simple_repeat Simple_repeat 1 21 0 21 0 0 0 chr2 143859652 143859673 -109396910 + AT_rich Low_complexity Low_complexity 1 21 0 208 299 0 0 chr2 143860551 143860628 -109395955 + T-rich Low_complexity Low_complexity 1 77 0 431 277 84 39 chr2 143861389 143861674 -109394909 - L1ME3 LINE L1 -14 6148 5851 * 2225 257 27 24 chr2 143861661 143862603 -109393980 - L1ME2 LINE L1 -227 5937 4995 822 244 57 73 chr2 143862640 143862956 -109393627 - LTR16A1 LTR ERVL 0 457 147 1434 284 32 8 chr2 143863162 143863750 -109392833 - L1ME2 LINE L1 -1265 4881 4280 212 282 14 0 chr2 143864380 143864451 -109392132 + (TA)n Simple_repeat Simple_repeat 2 73 0 224 242 0 9 chr2 143865317 143865429 -109391154 + CT-rich Low_complexity Low_complexity 1 111 0 243 319 18 9 chr2 143866677 143866790 -109389793 + CT-rich Low_complexity Low_complexity 1 114 0 213 283 0 0 chr2 143867494 143867547 -109389036 + CT-rich Low_complexity Low_complexity 4 56 0 3869 20 0 9 chr2 143867553 143868010 -109388573 - L1PA2 LINE L1 0 6155 5703 3164 27 3 0 chr2 143868010 143868383 -109388200 + L1PA2 LINE L1 5342 5715 -440 270 275 12 12 chr2 143868678 143868758 -109387825 + CT-rich Low_complexity Low_complexity 2 81 0 529 184 41 0 chr2 143868955 143869053 -109387530 + Tigger3b DNA MER2_type 1 102 -1129 * 5350 135 24 43 chr2 143869052 143869141 -109387442 + Tigger3b DNA MER2_type 275 364 -2664 1805 151 0 0 chr2 143869141 143869400 -109387183 + AluSx SINE Alu 13 271 -41 188 0 74 0 chr2 143869408 143869435 -109387148 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5350 135 24 43 chr2 143869435 143870312 -109386271 + Tigger3b DNA MER2_type 371 1231 0 1383 201 98 53 chr2 143870842 143870926 -109385657 - MSTD LTR MaLR 0 396 317 2225 95 3 22 chr2 143870926 143871241 -109385342 - AluSc SINE Alu 0 309 1 1383 201 98 53 chr2 143871241 143871535 -109385048 - MSTD LTR MaLR -79 317 1 259 290 43 11 chr2 143872318 143872411 -109384172 + MIR SINE MIR 45 140 -122 2029 117 53 13 chr2 143872502 143872802 -109383781 + AluSx SINE Alu 1 312 0 22 35 0 0 chr2 143873637 143873666 -109382917 + AT_rich Low_complexity Low_complexity 1 29 0 374 191 206 28 chr2 143873982 143874123 -109382460 + MIR SINE MIR 88 253 -9 261 324 167 0 chr2 143874127 143874235 -109382348 - L2 LINE L2 -9 3263 3138 2260 100 3 7 chr2 143874331 143874641 -109381942 - AluSc SINE Alu 0 309 1 1072 69 8 0 chr2 143874641 143874772 -109381811 - AluYb8 SINE Alu -184 134 3 200 163 23 0 chr2 143875459 143875502 -109381081 + GA-rich Low_complexity Low_complexity 4 47 0 514 277 72 41 chr2 143876011 143876303 -109380280 - L1MC4 LINE L1 -128 7914 7614 338 345 95 15 chr2 143877121 143877321 -109379262 + MIR SINE MIR 37 252 -10 21 0 0 0 chr2 143877897 143877918 -109378665 + AT_rich Low_complexity Low_complexity 1 21 0 1587 275 42 47 chr2 143877932 143878776 -109377807 - L2 LINE L2 -147 3166 2330 835 164 4 169 chr2 143878790 143879015 -109377568 - MER5A DNA MER1_type 0 189 2 301 20 20 61 chr2 143879625 143879674 -109376909 + L1PA3 LINE L1 6104 6150 -5 33 0 0 0 chr2 143879674 143879707 -109376876 + AT_rich Low_complexity Low_complexity 1 33 0 225 262 87 87 chr2 143879836 143880042 -109376541 + MER112 DNA MER1_type 2 207 -53 875 229 141 0 chr2 143880046 143880273 -109376310 + MIR SINE MIR 2 260 -2 632 320 44 20 chr2 143880974 143881271 -109375312 - MLT1J1 LTR MaLR -128 318 15 606 191 134 50 chr2 143881787 143882049 -109374534 - L1MC5 LINE L1 -432 7529 7246 219 245 13 155 chr2 143882885 143883040 -109373543 - MIR3 SINE MIR 0 208 76 183 172 103 17 chr2 143883069 143883127 -109373456 - MIR SINE MIR -14 248 186 1717 198 22 16 chr2 143886326 143886689 -109369894 - MLT1A1 LTR MaLR 0 365 1 21 71 0 0 chr2 143887401 143887443 -109369140 + AT_rich Low_complexity Low_complexity 1 42 0 21 36 0 0 chr2 143888198 143888226 -109368357 + AT_rich Low_complexity Low_complexity 1 28 0 1489 174 59 86 chr2 143890418 143890860 -109365723 - MSTB1 LTR MaLR -2 430 1 1030 174 78 9 chr2 143890877 143891022 -109365561 - MSTB1-int LTR MaLR -19 1632 1464 216 0 0 0 chr2 143891022 143891046 -109365537 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1030 174 78 9 chr2 143891046 143891130 -109365453 - MSTB1-int LTR MaLR -187 1464 1387 * 13738 48 2 2 chr2 143891115 143892863 -109363720 + L1P LINE L1 3106 4852 -1294 9188 48 0 1 chr2 143893016 143894954 -109361629 + L1PA6 LINE L1 4209 6153 -1 3492 259 115 25 chr2 143894956 143895648 -109360935 - MSTB1-int LTR MaLR -244 1407 580 2403 67 0 6 chr2 143895648 143895961 -109360622 + AluY SINE Alu 1 311 0 3492 259 115 25 chr2 143895961 143896354 -109360229 - MSTB1-int LTR MaLR -1071 580 224 1815 171 29 69 chr2 143896381 143896831 -109359752 - MSTB1 LTR MaLR 0 432 1 261 288 88 65 chr2 143897431 143897601 -109358982 + MIR SINE MIR 78 251 -11 311 314 8 33 chr2 143897857 143897978 -109358605 - L2 LINE L2 -36 3277 3160 1787 189 0 0 chr2 143899463 143899760 -109356823 - AluJb SINE Alu -15 297 1 25 31 0 0 chr2 143900867 143900899 -109355684 + AT_rich Low_complexity Low_complexity 1 32 0 251 371 7 56 chr2 143901230 143901373 -109355210 + MIR3 SINE MIR 19 154 -54 339 276 94 24 chr2 143901466 143901593 -109354990 - MIR SINE MIR -117 145 10 25 31 0 0 chr2 143901659 143901691 -109354892 + AT_rich Low_complexity Low_complexity 1 32 0 264 320 107 8 chr2 143903004 143903126 -109353457 + MIR SINE MIR 21 154 -108 1735 158 53 3 chr2 143905183 143905468 -109351115 - AluSx SINE Alu -13 299 1 33 25 0 0 chr2 143906036 143906076 -109350507 + AT_rich Low_complexity Low_complexity 1 40 0 850 159 0 0 chr2 143906327 143906453 -109350130 - FLAM_C SINE Alu -6 127 2 2806 68 0 3 chr2 143907640 143907994 -109348589 + THE1A LTR MaLR 1 353 -2 10702 100 34 8 chr2 143907996 143909530 -109347053 + THE1A-int LTR MaLR 1 1574 -6 2807 68 6 0 chr2 143909536 143909889 -109346694 + THE1A LTR MaLR 1 355 0 663 270 34 47 chr2 143909996 143910229 -109346354 + MIR SINE MIR 33 262 0 258 338 113 37 chr2 143910559 143910952 -109345631 + L2 LINE L2 2735 3165 -148 239 271 0 0 chr2 143911027 143911086 -109345497 + GA-rich Low_complexity Low_complexity 2 60 0 234 311 34 42 chr2 143911537 143911656 -109344927 + L2 LINE L2 3192 3309 -4 207 250 0 51 chr2 143913203 143913286 -109343297 + GA-rich Low_complexity Low_complexity 2 129 0 494 346 51 13 chr2 143914476 143914710 -109341873 + MIR SINE MIR 20 262 0 1567 196 27 41 chr2 143915580 143915824 -109340759 + MLT1A1 LTR MaLR 1 241 -124 1818 143 0 35 chr2 143915824 143916153 -109340430 + AluSx SINE Alu 5 323 0 1567 196 27 41 chr2 143916153 143916275 -109340308 + MLT1A1 LTR MaLR 241 363 -2 270 56 0 0 chr2 143916875 143916911 -109339672 + (TC)n Simple_repeat Simple_repeat 1 36 0 21 0 0 0 chr2 143917538 143917559 -109339024 + AT_rich Low_complexity Low_complexity 1 21 0 5512 156 14 37 chr2 143917570 143918214 -109338369 - L1MA4 LINE L1 -12 6470 5813 258 81 0 0 chr2 143918214 143918251 -109338332 + (TG)n Simple_repeat Simple_repeat 2 38 0 5512 156 14 37 chr2 143918251 143919282 -109337301 - L1MA4 LINE L1 -669 5813 4838 1264 215 0 23 chr2 143919282 143919538 -109337045 + AluJb SINE Alu 1 250 -62 11138 199 32 10 chr2 143919538 143924291 -109332292 - L1MA4 LINE L1 -1476 4852 2 217 362 32 0 chr2 143924295 143924389 -109332194 + L3 LINE CR1 1480 1576 -1 227 325 25 16 chr2 143925319 143925501 -109331082 + MIR SINE MIR 20 256 -6 232 235 52 9 chr2 143925683 143925798 -109330785 + (TA)n Simple_repeat Simple_repeat 2 121 0 22 0 0 0 chr2 143927037 143927059 -109329524 + AT_rich Low_complexity Low_complexity 1 22 0 850 262 156 55 chr2 143927156 143927225 -109329358 - Charlie7 DNA MER1_type -1927 685 624 1944 106 8 0 chr2 143927225 143927479 -109329104 - AluSc SINE Alu -53 256 1 850 262 156 55 chr2 143927479 143928031 -109328552 - Charlie7 DNA MER1_type -1988 624 1 3963 130 42 48 chr2 143930978 143931518 -109325065 - MER50 LTR ERV1 -23 711 174 2173 82 3 70 chr2 143931518 143931849 -109324734 - AluY SINE Alu -2 309 1 3963 130 42 48 chr2 143931849 143932023 -109324560 - MER50 LTR ERV1 -560 174 1 2023 137 3 32 chr2 143932239 143932553 -109324030 + AluSq SINE Alu 1 305 -8 1971 123 3 26 chr2 143933317 143933619 -109322964 - AluSx SINE Alu -17 295 1 318 344 88 25 chr2 143933776 143933936 -109322647 + MIR SINE MIR 16 185 -77 387 276 91 53 chr2 143933990 143934233 -109322350 - MIR SINE MIR -11 251 5 396 302 13 6 chr2 143934807 143934966 -109321617 + (TA)n Simple_repeat Simple_repeat 2 161 0 497 335 37 18 chr2 143935005 143935387 -109321196 + L1MC4a LINE L1 5536 5924 -1884 606 264 88 6 chr2 143937587 143937746 -109318837 - MER5B DNA MER1_type 0 178 7 2331 154 30 30 chr2 143938044 143938478 -109318105 - Tigger2a DNA MER2_type 0 434 1 181 200 108 46 chr2 143939337 143939402 -109317181 - L2 LINE L2 0 3313 3245 330 164 0 0 chr2 143939450 143939517 -109317066 - L1PB4 LINE L1 -4 6152 6086 21 71 0 0 chr2 143939939 143939981 -109316602 + AT_rich Low_complexity Low_complexity 1 42 0 2488 58 0 0 chr2 143940107 143940402 -109316181 + AluY SINE Alu 1 295 -16 2221 117 3 0 chr2 143940417 143940716 -109315867 + AluSx SINE Alu 2 301 -11 7845 129 8 18 chr2 143941067 143942372 -109314211 - HSMAR2 DNA Mariner -9 1293 3 2103 133 7 0 chr2 143942648 143942942 -109313641 + AluSx SINE Alu 3 298 -14 185 367 11 22 chr2 143943056 143943146 -109313437 - MER5A DNA MER1_type -38 151 63 323 254 15 0 chr2 143943368 143943435 -109313148 - MIR SINE MIR -58 150 83 1597 249 46 62 chr2 143943981 143944543 -109312040 - L1ME3A LINE L1 -27 6143 5591 1254 226 56 0 chr2 143945270 143945519 -109311064 + Tigger7 DNA MER2_type 2 264 -2223 733 233 77 70 chr2 143945519 143945961 -109310622 + LTR56 LTR ERV1 1 445 0 1722 139 4 11 chr2 143945968 143946249 -109310334 + Tigger7 DNA MER2_type 247 525 -208 557 151 12 0 chr2 143946243 143946329 -109310254 + Tigger7 DNA MER2_type 2400 2486 -5 * 2730 197 107 3 chr2 143946832 143947440 -109309143 - LTR51 LTR ERV1 0 671 1 972 304 106 7 chr2 143947553 143947958 -109308625 - LTR16C LTR ERVL 0 491 47 234 0 0 0 chr2 143948010 143948036 -109308547 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 491 258 80 6 chr2 143948623 143948786 -109307797 + MER5B DNA MER1_type 4 178 0 1472 82 64 23 chr2 143949651 143949871 -109306712 - MER30 DNA MER1_type 0 230 2 875 289 85 30 chr2 143949968 143950404 -109306179 - MLT1L LTR MaLR -8 607 148 416 250 67 0 chr2 143950640 143950760 -109305823 - MER5A DNA MER1_type -54 135 8 22 0 0 0 chr2 143950898 143950920 -109305663 + AT_rich Low_complexity Low_complexity 1 22 0 345 307 11 57 chr2 143953885 143954061 -109302522 + Charlie8 DNA MER1_type 6 173 -2244 2165 139 0 3 chr2 143954173 143954483 -109302100 - AluSx SINE Alu -3 309 1 894 305 59 24 chr2 143954517 143955085 -109301498 - MER115 DNA AcHobo 0 693 68 3845 212 64 40 chr2 143955544 143956468 -109300115 - Charlie1a DNA MER1_type -1307 1454 553 237 65 0 0 chr2 143956468 143956499 -109300084 + (TTTG)n Simple_repeat Simple_repeat 1 31 0 1743 83 48 0 chr2 143956506 143956734 -109299849 - AluY SINE Alu -36 275 37 3845 212 64 40 chr2 143956734 143956899 -109299684 - Charlie1a DNA MER1_type -2213 548 331 844 224 45 32 chr2 143956898 143957144 -109299439 - Charlie1a DNA MER1_type -1205 250 2 * 185 308 178 12 chr2 143957985 143958154 -109298429 + MIR SINE MIR 65 261 -1 5051 173 30 17 chr2 143958464 143959895 -109296688 - L1MA4A LINE L1 -11 6994 5542 1314 107 151 10 chr2 143959897 143960102 -109296481 - AluSg SINE Alu -76 234 1 13733 201 49 15 chr2 143960103 143963506 -109293077 - L1MA4A LINE L1 -3325 3523 6 999 230 85 88 chr2 143964126 143964491 -109292092 + MLT1A1 LTR MaLR 1 364 -1 788 309 5 0 chr2 143964773 143964990 -109291593 - MER58A DNA MER1_type -3 221 4 2219 91 0 23 chr2 143965157 143965465 -109291118 + AluYa5 SINE Alu 1 301 -10 506 229 0 84 chr2 143965598 143965777 -109290806 + MER103 DNA DNA 1 164 -2 585 306 16 16 chr2 143966466 143966649 -109289934 - MIR SINE MIR -51 211 29 198 0 0 0 chr2 143966837 143966859 -109289724 + (TTTTA)n Simple_repeat Simple_repeat 3 24 0 280 321 121 7 chr2 143966891 143967031 -109289552 - L2 LINE L2 -193 3079 2924 943 35 0 0 chr2 143967284 143967397 -109289186 - L1PA3 LINE L1 -3 6152 6040 367 336 0 31 chr2 143968888 143969016 -109287567 - L2 LINE L2 0 3272 3149 612 238 61 0 chr2 143971185 143971332 -109285251 - MER58A DNA MER1_type -24 200 45 5278 227 53 71 chr2 143971332 143972525 -109284058 + L1MB7 LINE L1 4 1159 -5487 1382 88 51 0 chr2 143972525 143972741 -109283842 - L1MA5A LINE L1 0 6297 6071 5278 227 53 71 chr2 143972741 143973644 -109282939 + L1MB7 LINE L1 1159 2076 -4570 505 263 8 0 chr2 143973671 143973804 -109282779 + L1MB7 LINE L1 3152 3285 -3359 * 3522 198 55 38 chr2 143973792 143974004 -109282579 + L1MB7 LINE L1 5157 5364 -1318 1432 252 103 21 chr2 143974004 143974469 -109282114 - MLT1D LTR MaLR -2 503 1 3522 198 55 38 chr2 143974469 143975665 -109280918 + L1MB7 LINE L1 5364 6597 -85 221 303 64 55 chr2 143976837 143976946 -109279637 - L2 LINE L2 -5 3267 3158 834 0 82 0 chr2 143977462 143977608 -109278975 + (TA)n Simple_repeat Simple_repeat 2 159 0 246 128 0 0 chr2 143977662 143977701 -109278882 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 186 103 0 0 chr2 143978555 143978584 -109277999 + (TG)n Simple_repeat Simple_repeat 2 30 0 225 0 0 0 chr2 143980422 143980447 -109276136 + (T)n Simple_repeat Simple_repeat 1 25 0 1830 156 16 0 chr2 143980638 143980952 -109275631 - L1MB1 LINE L1 -3 6165 5847 711 129 9 0 chr2 143981995 143982111 -109274472 + L1PA15 LINE L1 6040 6156 -9 198 0 0 0 chr2 143982116 143982138 -109274445 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 30545 62 3 4 chr2 143985672 143991828 -109264755 + L1PA5 LINE L1 2 6140 -14 7283 99 3 33 chr2 143991960 143993090 -109263493 + HERVH LTR ERV1 1526 2622 -5091 7239 51 11 2 chr2 143993470 143994651 -109261932 - L1PA5 LINE L1 -4 6150 4967 2687 76 106 5 chr2 143995129 143995536 -109261047 + LTR7 LTR ERV1 1 448 -2 10318 87 42 12 chr2 143995538 143997085 -109259498 + HERVH LTR ERV1 1 1593 -6120 2244 111 53 0 chr2 143997187 143997547 -109259036 + L1MA2 LINE L1 5925 6303 -1 225 139 0 0 chr2 143998490 143998533 -109258050 + (TA)n Simple_repeat Simple_repeat 1 43 0 794 218 56 2 chr2 143998677 143998850 -109257733 + MER20 DNA MER1_type 34 219 0 217 370 35 17 chr2 143999223 143999396 -109257187 + L2 LINE L2 2034 2209 -1105 29 60 0 0 chr2 144000306 144000356 -109256227 + AT_rich Low_complexity Low_complexity 1 50 0 1729 112 0 4 chr2 144001058 144001308 -109255275 - HERVH LTR ERV1 -2977 4736 4488 3365 107 4 6 chr2 144001310 144001813 -109254770 - HERVH LTR ERV1 -3720 3993 3492 796 142 22 0 chr2 144001803 144001937 -109254646 - HERVH LTR ERV1 -4423 3290 3154 * 401 221 15 22 chr2 144002057 144002193 -109254390 + Alu SINE Alu 177 311 0 27 0 0 0 chr2 144002477 144002504 -109254079 + AT_rich Low_complexity Low_complexity 1 27 0 1716 149 25 78 chr2 144002623 144003019 -109253564 - THE1C LTR MaLR 0 375 1 386 280 66 44 chr2 144003441 144003623 -109252960 - MIR SINE MIR -57 205 20 526 272 27 27 chr2 144004540 144004724 -109251859 + MER117 DNA MER1_type 4 187 -10 300 121 52 0 chr2 144006191 144006249 -109250334 - L1MB4 LINE L1 -1 6179 6119 915 202 74 35 chr2 144006249 144006507 -109250076 + L1MB5 LINE L1 5881 6148 -26 396 0 0 0 chr2 144006584 144006628 -109249955 + (TA)n Simple_repeat Simple_repeat 2 45 0 490 306 92 13 chr2 144006632 144006861 -109249722 + MIR SINE MIR 1 247 -15 238 303 76 8 chr2 144009298 144009417 -109247166 + MLT1E LTR MaLR 418 544 -49 225 206 0 103 chr2 144009708 144009776 -109246807 - L2 LINE L2 -1 3312 3252 416 254 66 97 chr2 144010205 144010334 -109246249 + Charlie8 DNA MER1_type 35 156 -185 2651 33 3 0 chr2 144010334 144010640 -109245943 + AluY SINE Alu 3 309 -2 416 254 66 97 chr2 144010640 144010738 -109245845 + Charlie8 DNA MER1_type 156 255 -86 442 181 133 0 chr2 144010765 144010848 -109245735 - MER58B DNA MER1_type -45 296 203 * 503 161 62 0 chr2 144010844 144010925 -109245658 + MER58B DNA MER1_type 255 340 -1 424 231 148 50 chr2 144010970 144011152 -109245431 + L2 LINE L2 3114 3313 0 237 308 222 0 chr2 144011139 144011256 -109245327 - L2 LINE L2 -459 2855 2713 * 1549 221 136 28 chr2 144012673 144013138 -109243445 - MER119 DNA MER1_type 0 583 69 362 303 158 0 chr2 144015011 144015176 -109241407 - HAL1 LINE L1 -616 1891 1701 33 66 0 0 chr2 144015260 144015321 -109241262 + AT_rich Low_complexity Low_complexity 1 61 0 589 291 146 25 chr2 144015575 144016294 -109240289 + L1 LINE L1 3177 3982 -2164 1441 247 38 75 chr2 144016316 144016399 -109240184 + MLT1F1 LTR MaLR 1 86 -481 1291 208 161 5 chr2 144016399 144016828 -109239755 - LTR54B LTR ERV1 -2 496 1 1441 247 38 75 chr2 144016828 144017335 -109239248 + MLT1F1 LTR MaLR 86 567 0 471 297 117 34 chr2 144017337 144017712 -109238871 + L1 LINE L1 3995 4398 -1748 259 409 0 0 chr2 144019048 144019136 -109237447 + L2 LINE L2 2987 3074 -198 1727 179 33 38 chr2 144019700 144020092 -109236491 - MLT1B LTR MaLR 0 390 1 277 185 0 22 chr2 144020183 144020275 -109236308 + (TA)n Simple_repeat Simple_repeat 1 90 0 282 240 40 0 chr2 144020343 144020418 -109236165 + L1M1 LINE L1 2209 2286 -3860 2942 103 10 78 chr2 144020418 144020863 -109235720 + MLT2A2 LTR ERVL 1 412 -41 255 61 0 0 chr2 144020863 144020896 -109235687 + (TG)n Simple_repeat Simple_repeat 2 34 0 2942 103 10 78 chr2 144020896 144020936 -109235647 + MLT2A2 LTR ERVL 412 453 0 9896 88 2 4 chr2 144020936 144022253 -109234330 + HERVL-A2 LTR ERVL 1 1315 -4339 515 205 45 0 chr2 144022253 144022365 -109234218 + L1M1 LINE L1 3738 3854 -2292 202 143 24 0 chr2 144022404 144022446 -109234137 + (TAAA)n Simple_repeat Simple_repeat 4 46 0 239 112 31 51 chr2 144022446 144022544 -109234039 + (TTTA)n Simple_repeat Simple_repeat 4 99 0 7625 161 17 12 chr2 144022572 144024490 -109232093 + L1M1 LINE L1 3836 5760 -544 21 36 0 0 chr2 144025230 144025258 -109231325 + AT_rich Low_complexity Low_complexity 1 28 0 183 42 0 0 chr2 144025378 144025402 -109231181 + (CAA)n Simple_repeat Simple_repeat 2 25 0 321 291 241 5 chr2 144025550 144025753 -109230830 - MIR SINE MIR -11 251 1 453 300 67 57 chr2 144026121 144026421 -109230162 + Charlie8 DNA MER1_type 94 396 -2021 277 291 74 68 chr2 144026646 144026794 -109229789 - MIR SINE MIR -111 151 3 740 233 10 31 chr2 144026875 144027037 -109229546 - MER63A DNA MER1_type -1492 196 37 378 0 0 0 chr2 144027037 144027079 -109229504 + (TG)n Simple_repeat Simple_repeat 1 42 0 740 233 10 31 chr2 144027079 144027109 -109229474 - MER63A DNA MER1_type -1651 37 8 419 307 103 75 chr2 144028326 144028821 -109227762 + MLT1J LTR MaLR 3 511 0 656 204 38 0 chr2 144029123 144029280 -109227303 - L1MB1 LINE L1 -1 6403 6241 11443 247 44 16 chr2 144029281 144033836 -109222747 - L1MB1 LINE L1 -550 5854 1088 690 258 21 38 chr2 144033836 144034076 -109222507 + L1P3 LINE L1 438 673 -5788 715 133 0 0 chr2 144034087 144034200 -109222383 + L1P5 LINE L1 5674 5786 -365 318 178 0 109 chr2 144034223 144034324 -109222259 - L1MC4 LINE L1 -1339 6703 6614 252 0 0 0 chr2 144034334 144034362 -109222221 + (CA)n Simple_repeat Simple_repeat 2 29 0 306 132 0 0 chr2 144034610 144034663 -109221920 + (TA)n Simple_repeat Simple_repeat 1 53 0 846 284 152 52 chr2 144034763 144035151 -109221432 + LTR33 LTR ERVL 93 519 -2 320 39 0 59 chr2 144035514 144035565 -109221018 + (TA)n Simple_repeat Simple_repeat 2 49 0 639 325 88 51 chr2 144035704 144036249 -109220334 + ERVL LTR ERVL 1261 1825 -3939 287 184 0 0 chr2 144036681 144036730 -109219853 - MER5A DNA MER1_type -16 173 125 4159 24 14 0 chr2 144036774 144037267 -109219316 - L1PA4 LINE L1 -1 6154 5655 1750 34 0 0 chr2 144037267 144037472 -109219111 + L1PA4 LINE L1 5454 5658 -497 330 289 52 0 chr2 144037472 144037569 -109219014 - MER5A DNA MER1_type -57 132 31 573 330 52 26 chr2 144037697 144038064 -109218519 + ERVL LTR ERVL 2385 2768 -2228 188 299 24 87 chr2 144038068 144038195 -109218388 - L3 LINE CR1 -1099 478 360 1210 342 63 29 chr2 144038245 144038911 -109217672 + ERVL LTR ERVL 3018 3706 -2058 266 333 45 6 chr2 144039045 144039201 -109217382 + ERVL LTR ERVL 3860 4021 -1464 320 323 20 7 chr2 144039268 144039479 -109217104 + ERVL LTR ERVL 4062 4344 -1349 861 237 85 34 chr2 144039500 144040146 -109216437 - L1ME LINE L1 -526 5572 4891 270 108 0 0 chr2 144040233 144040270 -109216313 + FLAM_A SINE Alu 87 123 -10 711 211 8 0 chr2 144040271 144040399 -109216184 + AluJo/FRAM SINE Alu 161 289 -23 668 88 38 4 chr2 144040398 144040557 -109216026 + (TAGA)n Simple_repeat Simple_repeat 1 164 0 * 686 257 156 38 chr2 144040559 144041064 -109215519 - L1ME LINE L1 -1241 4839 4275 329 271 97 14 chr2 144041069 144041311 -109215272 - L1ME LINE L1 -5021 1062 807 25 51 0 0 chr2 144041414 144041453 -109215130 + AT_rich Low_complexity Low_complexity 1 39 0 4103 78 4 2 chr2 144041469 144042017 -109214566 + L1P LINE L1 4082 4630 -1516 1827 173 0 7 chr2 144042566 144042873 -109213710 + AluJb SINE Alu 1 305 -7 393 102 0 0 chr2 144042922 144042981 -109213602 + (TG)n Simple_repeat Simple_repeat 2 60 0 562 268 6 6 chr2 144043431 144043588 -109212995 + L1ME3 LINE L1 6004 6160 -2 437 261 113 45 chr2 144043642 144044128 -109212455 + L1ME3A LINE L1 4078 4596 -1550 52 41 0 0 chr2 144044262 144044335 -109212248 + AT_rich Low_complexity Low_complexity 1 73 0 2401 154 18 20 chr2 144044338 144044778 -109211805 + L1PA16 LINE L1 5719 6157 -9 975 307 25 22 chr2 144044791 144045391 -109211192 + L1ME3A LINE L1 4625 5226 -920 3301 159 39 87 chr2 144045409 144046183 -109210400 + Tigger2 DNA MER2_type 1 737 -1981 1450 155 24 4 chr2 144046252 144046503 -109210080 + Tigger2 DNA MER2_type 2452 2707 -11 878 285 103 32 chr2 144046551 144047084 -109209499 + L1ME3A LINE L1 5256 5826 -344 362 222 14 0 chr2 144047124 144047196 -109209387 + Tigger5 DNA MER2_type 1 73 -2250 258 246 46 0 chr2 144047198 144047263 -109209320 - Tigger5 DNA MER2_type -1 2322 2255 367 268 0 0 chr2 144047349 144047431 -109209152 + Tigger5 DNA MER2_type 2242 2323 0 1929 179 25 0 chr2 144047471 144047828 -109208755 - MER47A DNA MER2_type 0 366 1 251 246 123 49 chr2 144048000 144048203 -109208380 + L1MC/D LINE L1 5631 5848 -273 2526 197 0 93 chr2 144048218 144048818 -109207765 - MER52A LTR ERV1 0 1755 1212 338 284 0 52 chr2 144048800 144048934 -109207649 - LTR28 LTR ERV1 -308 712 586 * 256 228 0 87 chr2 144048903 144048995 -109207588 - MER52A LTR ERV1 -389 1366 1283 * 2938 187 130 90 chr2 144049097 144050148 -109206435 - MER52A LTR ERV1 -522 1233 1 26 0 0 0 chr2 144050258 144050284 -109206299 + AT_rich Low_complexity Low_complexity 1 26 0 434 288 86 26 chr2 144050539 144050852 -109205731 + L1M4 LINE L1 3692 4023 -2123 615 337 42 40 chr2 144050905 144051282 -109205301 + L1M3b LINE L1 1219 1596 -5900 275 331 40 24 chr2 144051280 144051404 -109205179 + L1M3b LINE L1 1551 1676 -5820 * 3391 265 52 41 chr2 144051724 144051855 -109204728 + L1M3b LINE L1 2097 2225 -5340 4865 90 28 17 chr2 144051855 144052569 -109204014 - LTR30 LTR ERV1 0 722 1 3391 265 52 41 chr2 144052569 144054774 -109201809 + L1M3b LINE L1 2225 4343 -3222 21 57 0 0 chr2 144054937 144054972 -109201611 + AT_rich Low_complexity Low_complexity 1 35 0 989 114 38 0 chr2 144055948 144056106 -109200477 + L1PA16 LINE L1 6000 6163 -3 727 114 19 0 chr2 144056866 144056971 -109199612 + HY1 scRNA scRNA 1 107 -5 2672 177 34 43 chr2 144057153 144057807 -109198776 + pTR5 LTR ERV1 738 1385 -1053 311 238 24 24 chr2 144057910 144057987 -109198596 - L1MC4 LINE L1 -1351 6691 6612 2472 103 11 5 chr2 144057987 144058354 -109198229 + L1PB1 LINE L1 5782 6150 -1 6265 92 6 20 chr2 144058377 144059526 -109197057 + L1PA10 LINE L1 5029 6158 -10 2982 274 71 27 chr2 144059614 144060655 -109195928 - L1M3d LINE L1 -4796 1095 9 241 304 17 88 chr2 144060937 144061118 -109195465 + MLT1J LTR MaLR 151 318 -193 201 318 0 0 chr2 144061632 144061698 -109194885 + T-rich Low_complexity Low_complexity 3 68 0 21 36 0 0 chr2 144061748 144061776 -109194807 + AT_rich Low_complexity Low_complexity 1 28 0 240 111 0 0 chr2 144061874 144061910 -109194673 + (TA)n Simple_repeat Simple_repeat 2 37 0 * 306 0 0 0 chr2 144061909 144061943 -109194640 + (TG)n Simple_repeat Simple_repeat 1 34 0 1942 152 3 0 chr2 144062146 144062449 -109194134 + AluSx SINE Alu 1 304 -8 636 40 24 40 chr2 144063784 144063908 -109192675 + (TA)n Simple_repeat Simple_repeat 2 123 0 1194 197 27 103 chr2 144066509 144066915 -109189668 - MLT2D LTR ERVL -39 375 1 196 354 10 42 chr2 144068354 144068450 -109188133 - L3b LINE CR1 -278 1305 1213 436 228 108 0 chr2 144069555 144069722 -109186861 - L1MEc LINE L1 -4030 2366 2182 4252 290 51 20 chr2 144069747 144071193 -109185390 + HERVL40 LTR ERVL 2199 2350 -687 253 263 0 0 chr2 144071898 144071955 -109184628 + HERVL40 LTR ERVL 2726 2782 -255 * 295 279 111 47 chr2 144071951 144072123 -109184460 + MER89-int LTR ERV1 6316 6498 -303 * 918 265 61 11 chr2 144072074 144072338 -109184245 + HERVL40 LTR ERVL 5253 5529 -1 1409 268 51 30 chr2 144072339 144072847 -109183736 + LTR40a LTR ERVL 1 519 0 24 32 0 0 chr2 144073003 144073034 -109183549 + AT_rich Low_complexity Low_complexity 1 31 0 5319 149 19 5 chr2 144073609 144074474 -109182109 - HSMAR2 DNA Mariner -7 1295 419 1792 194 46 31 chr2 144074477 144075019 -109181564 + MLT2A2 LTR ERVL 3 554 0 2624 124 24 0 chr2 144075019 144075430 -109181153 - HSMAR2 DNA Mariner -880 422 2 528 318 86 19 chr2 144075463 144075730 -109180853 + MLT1I LTR MaLR 123 407 -2 2080 128 26 0 chr2 144075841 144076199 -109180384 + AluSx SINE Alu 1 366 0 321 350 85 14 chr2 144076437 144076660 -109179923 - MIR SINE MIR -12 250 12 455 178 11 0 chr2 144077030 144077126 -109179457 + L1ME2 LINE L1 5840 5936 -228 * 3796 229 35 18 chr2 144077124 144078232 -109178351 + L1M4 LINE L1 3822 4948 -1198 7283 230 68 30 chr2 144078562 144080512 -109176071 + L1PA15 LINE L1 406 2506 -4291 1817 113 0 0 chr2 144080512 144080752 -109175831 - AluSx SINE Alu -20 292 53 7283 230 68 30 chr2 144080752 144081663 -109174920 + L1PA15 LINE L1 2506 3381 -3416 10789 187 12 0 chr2 144081675 144084747 -109171836 + L1PA15 LINE L1 3757 6808 -8 568 277 10 35 chr2 144084936 144085138 -109171445 - MIR SINE MIR 0 262 66 2076 134 7 0 chr2 144085212 144085517 -109171066 - AluSx SINE Alu -5 307 1 22 35 0 0 chr2 144085728 144085757 -109170826 + AT_rich Low_complexity Low_complexity 1 29 0 181 390 13 0 chr2 144086994 144087071 -109169512 - L2 LINE L2 -40 3232 3155 34 65 0 0 chr2 144087210 144087272 -109169311 + AT_rich Low_complexity Low_complexity 1 62 0 26 50 0 0 chr2 144088343 144088383 -109168200 + AT_rich Low_complexity Low_complexity 1 40 0 24 0 0 0 chr2 144088485 144088509 -109168074 + AT_rich Low_complexity Low_complexity 1 24 0 1307 206 181 5 chr2 144088534 144088931 -109167652 - LTR54B LTR ERV1 -31 467 1 350 238 74 78 chr2 144088944 144089200 -109167383 + HAL1b LINE L1 714 968 -380 21 0 0 0 chr2 144089215 144089236 -109167347 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 144089310 144089331 -109167252 + AT_rich Low_complexity Low_complexity 1 21 0 1157 203 15 26 chr2 144089469 144089735 -109166848 - L1MC1 LINE L1 0 6333 6071 1276 151 44 0 chr2 144089736 144089941 -109166642 - MLT1A1 LTR MaLR -4 361 148 855 120 0 0 chr2 144089948 144090073 -109166510 - AluSp/q SINE Alu -7 306 182 772 197 7 33 chr2 144090077 144090229 -109166354 - MLT1A1 LTR MaLR -217 148 1 3461 155 61 45 chr2 144090230 144090922 -109165661 - L1MC1 LINE L1 -258 6075 5373 406 335 80 0 chr2 144092500 144092676 -109163907 + MIR SINE MIR 67 256 -6 28 48 0 0 chr2 144093523 144093565 -109163018 + AT_rich Low_complexity Low_complexity 1 42 0 330 321 6 30 chr2 144094013 144094178 -109162405 - MIR SINE MIR -8 254 94 1346 175 4 4 chr2 144094182 144094416 -109162167 - MER74A LTR ERVL 0 558 325 196 380 35 35 chr2 144094657 144094770 -109161813 + MIR SINE MIR 36 148 -114 1472 119 11 60 chr2 144094781 144095066 -109161517 - LTR23 LTR ERV1 0 437 167 597 144 59 105 chr2 144095140 144095293 -109161290 - LTR23 LTR ERV1 -286 151 6 485 148 56 113 chr2 144095695 144095837 -109160746 - LTR23 LTR ERV1 -286 151 18 2010 186 11 8 chr2 144096026 144096164 -109160419 - L1PB4 LINE L1 -2 6154 6017 3157 160 18 36 chr2 144096164 144097239 -109159344 - L1MA5 LINE L1 -279 6021 5008 3313 165 68 2 chr2 144097599 144098206 -109158377 - MER39B LTR ERV1 0 653 7 2116 120 7 3 chr2 144098615 144098907 -109157676 + AluSq SINE Alu 7 299 -14 428 292 140 38 chr2 144099439 144099675 -109156908 + MIR SINE MIR 2 261 -1 605 114 30 163 chr2 144100852 144101054 -109155529 + MER53 DNA DNA 1 175 -14 557 396 36 3 chr2 144101072 144101458 -109155125 + MLT1K LTR MaLR 34 432 -156 2022 196 52 125 chr2 144101470 144102254 -109154329 + LTR8A LTR ERV1 1 727 0 4186 190 29 36 chr2 144102316 144103340 -109153243 + MER83B-int LTR ERV1 355 1482 -4464 1901 166 209 99 chr2 144103418 144103517 -109153066 + MER83B-int LTR ERV1 767 854 -4026 2383 155 41 2 chr2 144103517 144103929 -109152654 - MSTA LTR MaLR 0 428 1 1901 166 209 99 chr2 144103929 144104331 -109152252 + MER83B-int LTR ERV1 854 1917 -2963 2102 254 68 88 chr2 144104456 144104708 -109151875 + MER83B-int LTR ERV1 1373 1629 -5524 303 104 0 0 chr2 144104708 144104756 -109151827 + (TA)n Simple_repeat Simple_repeat 2 49 0 2102 254 68 88 chr2 144104756 144105582 -109151001 + MER83B-int LTR ERV1 1629 3268 -3885 2073 142 12 3 chr2 144105582 144105913 -109150670 - MSTA LTR MaLR 0 428 95 1200 217 132 20 chr2 144105922 144106397 -109150186 + MER83B-int LTR ERV1 2542 2905 -1975 4203 139 17 7 chr2 144106497 144107216 -109149367 + L1PA15 LINE L1 5462 6187 0 864 162 7 0 chr2 144107216 144107364 -109149219 + MER4C LTR ERV1 317 465 0 278 26 26 0 chr2 144107384 144107423 -109149160 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 7025 43 15 0 chr2 144107556 144108424 -109148159 - L1PA5 LINE L1 -2 6152 5272 1472 84 5 0 chr2 144108424 144108626 -109147957 + L1PA5 LINE L1 5934 6137 -17 21 71 0 0 chr2 144109812 144109854 -109146729 + AT_rich Low_complexity Low_complexity 1 42 0 7933 185 69 41 chr2 144110740 144112945 -109143638 + MER83B-int LTR ERV1 4056 6141 -122 1404 281 104 32 chr2 144113063 144113245 -109143338 + L2 LINE L2 1963 2131 -1183 222 37 0 0 chr2 144113245 144113272 -109143311 + (TCTA)n Simple_repeat Simple_repeat 4 30 0 1404 281 104 32 chr2 144113272 144113524 -109143059 + L2 LINE L2 2131 2444 -870 525 282 74 0 chr2 144113524 144113687 -109142896 - MER96 DNA MER1_type 0 175 1 1404 281 104 32 chr2 144113687 144113781 -109142802 + L2 LINE L2 2444 2530 -784 22 0 0 0 chr2 144113845 144113867 -109142716 + AT_rich Low_complexity Low_complexity 1 22 0 1574 184 13 3 chr2 144113954 144114270 -109142313 - L1MC2 LINE L1 -2 6342 6024 248 344 43 11 chr2 144114623 144114716 -109141867 + L2 LINE L2 3121 3216 -56 216 243 57 0 chr2 144114762 144114832 -109141751 + GA-rich Low_complexity Low_complexity 1 74 0 22 0 0 0 chr2 144116017 144116039 -109140544 + AT_rich Low_complexity Low_complexity 1 22 0 336 180 41 0 chr2 144117810 144117883 -109138700 + L1P4 LINE L1 5472 5547 -618 378 0 0 0 chr2 144118749 144118791 -109137792 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 400 372 37 59 chr2 144118791 144119200 -109137383 - L2 LINE L2 -41 3231 2832 225 322 0 0 chr2 144119325 144119384 -109137199 - L2 LINE L2 -485 2829 2771 401 348 97 35 chr2 144119440 144119994 -109136589 - L2 LINE L2 -6 3307 2716 383 189 38 98 chr2 144120000 144120091 -109136492 - MLT1A2 LTR MaLR -115 275 193 396 0 0 0 chr2 144120091 144120135 -109136448 + (GA)n Simple_repeat Simple_repeat 1 44 0 383 189 38 98 chr2 144120135 144120175 -109136408 - MLT1A2 LTR MaLR -197 193 152 473 239 39 23 chr2 144120267 144120397 -109136186 - MLT1A2 LTR MaLR -241 133 2 346 340 59 12 chr2 144120448 144120754 -109135829 - L2 LINE L2 -716 2598 2221 2905 145 61 0 chr2 144120870 144121163 -109135420 - L1P4 LINE L1 -372 5794 5520 399 21 0 0 chr2 144121163 144121211 -109135372 + (TTA)n Simple_repeat Simple_repeat 1 48 0 2905 145 61 0 chr2 144121211 144121569 -109135014 - L1P4 LINE L1 -646 5520 5105 2154 180 0 0 chr2 144121576 144121948 -109134635 + L1PA16 LINE L1 5794 6165 -1 30 59 0 0 chr2 144121948 144121999 -109134584 + AT_rich Low_complexity Low_complexity 1 51 0 2674 206 18 21 chr2 144122074 144122508 -109134075 - MER68 LTR ERV1 0 562 128 219 36 0 0 chr2 144122508 144122536 -109134047 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 3567 170 21 14 chr2 144122538 144123202 -109133381 - L1MA10 LINE L1 -8 6326 5658 2674 206 18 21 chr2 144123202 144123328 -109133255 - MER68 LTR ERV1 -435 127 1 632 361 127 34 chr2 144123336 144124075 -109132508 - L2 LINE L2 -1339 1975 1168 197 216 0 39 chr2 144124266 144124317 -109132266 - L2 LINE L2 -9 3304 3256 24 77 0 0 chr2 144124935 144124987 -109131596 + AT_rich Low_complexity Low_complexity 1 52 0 28 86 0 0 chr2 144126121 144126191 -109130392 + AT_rich Low_complexity Low_complexity 1 70 0 29 0 0 0 chr2 144128058 144128087 -109128496 + AT_rich Low_complexity Low_complexity 1 29 0 1323 110 0 40 chr2 144128099 144128327 -109128256 - L1MA5A LINE L1 -3 6294 6076 22 0 0 0 chr2 144128707 144128729 -109127854 + AT_rich Low_complexity Low_complexity 1 22 0 251 293 107 0 chr2 144129251 144129326 -109127257 - L2 LINE L2 -256 3057 2975 228 35 0 0 chr2 144131027 144131056 -109125527 + (TG)n Simple_repeat Simple_repeat 1 29 0 384 315 54 9 chr2 144131903 144132014 -109124569 + MIR SINE MIR 30 145 -63 1506 169 71 71 chr2 144132329 144132388 -109124195 + LTR8A LTR ERV1 288 346 -381 1692 214 48 15 chr2 144132388 144132800 -109123783 - MSTB LTR MaLR 0 426 1 1506 169 71 71 chr2 144132800 144133178 -109123405 + LTR8A LTR ERV1 345 725 -2 346 255 67 34 chr2 144133178 144133325 -109123258 + MLT1K LTR MaLR 437 588 0 218 300 38 12 chr2 144133340 144133420 -109123163 + MIR SINE MIR 175 256 -6 252 0 0 0 chr2 144133891 144133919 -109122664 + (TG)n Simple_repeat Simple_repeat 2 29 0 578 230 138 0 chr2 144135057 144135209 -109121374 + MER96 DNA MER1_type? 3 175 0 2430 114 14 3 chr2 144135616 144135976 -109120607 - THE1B LTR MaLR 0 364 1 10460 112 24 27 chr2 144135976 144137561 -109119022 - THE1B-int LTR MaLR 0 1580 1 2270 139 17 3 chr2 144137561 144137920 -109118663 - THE1B LTR MaLR 0 364 1 2373 169 64 23 chr2 144138162 144138600 -109117983 + LTR32 LTR ERVL 15 470 -1 2431 75 0 3 chr2 144139985 144140279 -109116304 - AluY SINE Alu -17 294 2 203 32 65 0 chr2 144140343 144140374 -109116209 + T-rich Low_complexity Low_complexity 2 34 0 191 216 189 54 chr2 144140374 144140448 -109116135 + MIR3 SINE MIR 114 197 -11 1644 202 28 17 chr2 144140893 144141250 -109115333 - MLT1A1 LTR MaLR -4 361 1 921 319 22 6 chr2 144142848 144143171 -109113412 + LTR16C LTR ERVL 150 477 -14 225 188 0 21 chr2 144143650 144143698 -109112885 + (TGAA)n Simple_repeat Simple_repeat 3 49 0 1674 165 141 21 chr2 144143763 144144145 -109112438 + MSTA LTR MaLR 1 428 0 8804 141 25 47 chr2 144144147 144145756 -109110827 + MSTA-int LTR MaLR 3 1576 -4 1472 188 164 13 chr2 144145767 144146139 -109110444 + MSTA LTR MaLR 1 428 0 1943 201 48 84 chr2 144146951 144147661 -109108922 + LTR8A LTR ERV1 44 727 0 878 186 116 53 chr2 144148399 144148478 -109108105 + MER4C LTR ERV1 3 76 -389 226 0 0 56 chr2 144148478 144148514 -109108069 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 878 186 116 53 chr2 144148514 144148735 -109107848 + MER4C LTR ERV1 76 322 -143 265 208 0 69 chr2 144150163 144150235 -109106348 + L2 LINE L2 3245 3311 -2 1570 160 42 8 chr2 144152888 144153151 -109103432 - AluJb SINE Alu -6 306 35 359 251 63 126 chr2 144153481 144153720 -109102863 - MIR SINE MIR -7 255 32 399 218 112 12 chr2 144154510 144154680 -109101903 - L1MEc LINE L1 -4150 2246 2060 294 290 20 10 chr2 144154685 144154785 -109101798 + MER3 DNA MER1_type 7 107 -102 980 167 0 72 chr2 144154905 144155085 -109101498 + FRAM SINE Alu 1 165 -11 2920 265 71 52 chr2 144155087 144155443 -109101140 - L1MEc LINE L1 -4394 2002 1654 2303 97 0 3 chr2 144155443 144155752 -109100831 + AluY SINE Alu 1 308 -3 2920 265 71 52 chr2 144155752 144157112 -109099471 - L1MEc LINE L1 -4742 1654 253 328 141 16 0 chr2 144157114 144157177 -109099406 + MLT2B1 LTR ERVL 5 68 -452 2138 133 16 16 chr2 144157177 144157546 -109099037 - THE1C LTR MaLR 0 375 7 1431 188 76 76 chr2 144157550 144157944 -109098639 + MLT2B1 LTR ERVL 63 456 -64 243 246 0 0 chr2 144158021 144158078 -109098505 + MLT2B1 LTR ERVL 464 520 0 502 296 24 0 chr2 144158120 144158289 -109098294 - L1MEc LINE L1 -6165 231 59 1347 48 0 0 chr2 144158290 144158457 -109098126 - L1PA6 LINE L1 0 6154 5988 2831 121 38 6 chr2 144158572 144159052 -109097531 + HERVH LTR ERV1 3499 3993 -3720 338 183 10 0 chr2 144159086 144159172 -109097411 + HERVH LTR ERV1 3955 4049 -2957 591 147 0 28 chr2 144159175 144159284 -109097299 + LTR7 LTR ERV1 345 450 0 22 35 0 0 chr2 144159353 144159382 -109097201 + AT_rich Low_complexity Low_complexity 1 29 0 182 322 60 70 chr2 144161158 144161357 -109095226 - L2 LINE L2 -799 2515 2319 1956 143 10 10 chr2 144161401 144161702 -109094881 - AluJo SINE Alu -11 301 1 333 281 68 41 chr2 144161702 144161848 -109094735 - MIR SINE MIR -72 190 41 470 194 157 0 chr2 144162225 144162359 -109094224 - MIR SINE MIR 0 262 108 932 258 19 8 chr2 144162730 144162986 -109093597 + MER93a LTR ERV1 111 369 -33 255 330 45 0 chr2 144162996 144163084 -109093499 - MIR SINE MIR -166 96 5 808 205 41 0 chr2 144164212 144164383 -109092200 - MER5B DNA MER1_type 0 178 1 657 288 62 12 chr2 144165077 144165317 -109091266 + MIR SINE MIR 5 256 -6 784 263 112 51 chr2 144165331 144165860 -109090723 + MER34B LTR ERV1 5 565 0 24 67 0 0 chr2 144165944 144165989 -109090594 + AT_rich Low_complexity Low_complexity 1 45 0 456 100 0 50 chr2 144166230 144166310 -109090273 + MADE1 DNA Mariner 5 80 0 788 270 15 20 chr2 144166452 144166652 -109089931 + MIR SINE MIR 2 200 -62 618 297 107 10 chr2 144167859 144168159 -109088424 + MER69 DNA AcHobo 1 329 -897 279 211 35 111 chr2 144168167 144168286 -109088297 + MER69 DNA AcHobo 2321 2421 -105 2069 121 46 0 chr2 144168286 144168568 -109088015 - AluSq SINE Alu -18 295 1 279 211 35 111 chr2 144168568 144168647 -109087936 + MER69 DNA AcHobo 2421 2504 -22 273 29 0 0 chr2 144169896 144169930 -109086653 + (TC)n Simple_repeat Simple_repeat 1 34 0 2033 142 17 3 chr2 144170337 144170633 -109085950 + AluSx SINE Alu 1 300 -12 744 262 26 52 chr2 144170640 144170869 -109085714 - MIR SINE MIR -12 250 28 485 276 35 53 chr2 144170962 144171132 -109085451 - L3 LINE CR1 -73 1504 1338 381 301 155 24 chr2 144171270 144171483 -109085100 - L3 LINE CR1 -689 888 648 670 302 82 28 chr2 144173328 144173841 -109082742 - MER115 DNA AcHobo 0 693 87 728 244 161 63 chr2 144174268 144174715 -109081868 - MLT1D LTR MaLR 0 505 15 365 343 61 28 chr2 144175125 144175338 -109081245 - MIR SINE MIR -17 245 26 1330 116 106 0 chr2 144175854 144176061 -109080522 - MER30 DNA MER1_type -1 229 1 1788 195 26 81 chr2 144176328 144176857 -109079726 - MLT1D LTR MaLR -1 504 5 436 324 133 0 chr2 144177057 144177267 -109079316 + MIR SINE MIR 11 248 -14 1569 103 153 13 chr2 144177516 144177816 -109078767 + L1PB2 LINE L1 5808 6149 -2 306 0 0 0 chr2 144178009 144178043 -109078540 + (CA)n Simple_repeat Simple_repeat 1 34 0 2162 109 50 31 chr2 144178361 144178718 -109077865 + THE1B LTR MaLR 1 364 0 362 321 91 6 chr2 144179668 144179833 -109076750 - MIR SINE MIR -10 252 74 180 77 0 0 chr2 144179909 144179935 -109076648 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 234 252 67 44 chr2 144181857 144181992 -109074591 - L1ME LINE L1 -262 5859 5722 4706 191 40 12 chr2 144182664 144183804 -109072779 - L1MA7 LINE L1 -755 5391 4221 3813 166 75 14 chr2 144183798 144184164 -109072419 + L1MA7 LINE L1 5397 5739 -552 * 354 45 0 0 chr2 144184164 144184208 -109072375 + (CA)n Simple_repeat Simple_repeat 1 44 0 3813 166 75 14 chr2 144184208 144184681 -109071902 + L1MA7 LINE L1 5739 6287 -4 625 271 30 42 chr2 144184865 144185101 -109071482 - MIR SINE MIR 0 262 30 323 181 14 0 chr2 144185839 144185911 -109070672 + GA-rich Low_complexity Low_complexity 4 76 0 23 0 0 0 chr2 144185950 144185973 -109070610 + AT_rich Low_complexity Low_complexity 1 23 0 27 0 0 0 chr2 144186679 144186706 -109069877 + AT_rich Low_complexity Low_complexity 1 27 0 2320 143 17 48 chr2 144187445 144187908 -109068675 + L1MB7 LINE L1 5580 6028 -156 252 285 106 33 chr2 144187906 144188057 -109068526 + L1ME LINE L1 5571 5732 -389 * 2190 108 0 3 chr2 144188589 144188894 -109067689 - AluY SINE Alu -7 304 1 712 299 84 11 chr2 144189002 144189370 -109067213 - LTR33 LTR ERVL -1 520 126 582 300 50 15 chr2 144190132 144190332 -109066251 - L2 LINE L2 -350 2964 2758 272 263 13 26 chr2 144190549 144190625 -109065958 + L2 LINE L2 3180 3254 -18 292 160 0 0 chr2 144190642 144190692 -109065891 - MLT1B LTR MaLR -11 379 330 371 267 19 0 chr2 144190703 144190808 -109065775 - MER74A LTR ERVL -385 173 67 186 236 0 0 chr2 144190918 144190973 -109065610 + (TATG)n Simple_repeat Simple_repeat 2 56 0 258 274 78 0 chr2 144191207 144191309 -109065274 - L1ME LINE L1 -2151 5657 5548 249 33 0 0 chr2 144191636 144191666 -109064917 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 313 275 183 8 chr2 144193550 144193790 -109062793 + L1MB7 LINE L1 5548 5829 -1979 308 264 0 11 chr2 144193870 144193957 -109062626 + (TA)n Simple_repeat Simple_repeat 2 87 0 546 270 69 23 chr2 144194002 144194176 -109062407 + MER74A LTR ERVL 15 196 -362 353 120 0 0 chr2 144194174 144194224 -109062359 + MLT1B LTR MaLR 330 379 -11 * 245 250 26 40 chr2 144194241 144194317 -109062266 - L2 LINE L2 -18 3254 3180 518 335 45 10 chr2 144194535 144194735 -109061848 + L2 LINE L2 2758 2964 -350 295 284 28 45 chr2 144194992 144195168 -109061415 + L1M4c LINE L1 2032 2204 -4180 26 0 0 0 chr2 144195169 144195195 -109061388 + AT_rich Low_complexity Low_complexity 1 26 0 4715 179 18 16 chr2 144195205 144196588 -109059995 - L1PB4 LINE L1 0 6156 4763 514 196 0 101 chr2 144196640 144196788 -109059795 + L1MB7 LINE L1 6006 6138 -46 3450 154 43 36 chr2 144197813 144198486 -109058097 + L1MA8 LINE L1 5564 6241 -50 33 25 0 0 chr2 144198528 144198568 -109058015 + AT_rich Low_complexity Low_complexity 1 40 0 1914 220 63 0 chr2 144198709 144199154 -109057429 - MER63 DNA MER1_type 0 1061 589 2052 185 99 8 chr2 144199260 144199654 -109056929 - MSTB1 LTR MaLR 0 432 3 1643 164 32 26 chr2 144199991 144200302 -109056281 + THE1C LTR MaLR 1 313 -62 4909 80 15 0 chr2 144200718 144201366 -109055217 - PABL_A LTR ERV1 -2 658 1 2365 125 31 0 chr2 144201672 144202025 -109054558 + THE1B LTR MaLR 1 364 0 261 361 77 0 chr2 144202574 144202704 -109053879 - MIR3 SINE MIR -1 207 68 25 0 0 0 chr2 144203603 144203628 -109052955 + AT_rich Low_complexity Low_complexity 1 25 0 538 77 26 0 chr2 144203628 144203706 -109052877 + MADE1 DNA Mariner 1 80 0 24 32 0 0 chr2 144204727 144204758 -109051825 + AT_rich Low_complexity Low_complexity 1 31 0 29 28 0 0 chr2 144205010 144205046 -109051537 + AT_rich Low_complexity Low_complexity 1 36 0 462 315 76 26 chr2 144205081 144205438 -109051145 + L1M4 LINE L1 3686 4063 -2083 2031 163 74 10 chr2 144206402 144206808 -109049775 - MSTB1 LTR MaLR 0 432 1 24 100 0 0 chr2 144207303 144207383 -109049200 + AT_rich Low_complexity Low_complexity 1 80 0 700 302 69 21 chr2 144207741 144208029 -109048554 + MLT1I LTR MaLR 108 409 0 2163 95 3 3 chr2 144208623 144208927 -109047656 + AluY SINE Alu 1 304 -7 238 200 33 78 chr2 144209583 144209673 -109046910 - L1ME3 LINE L1 -19 6143 6058 919 254 105 3 chr2 144209697 144210020 -109046563 - L1ME3 LINE L1 -191 5971 5616 523 231 133 29 chr2 144210639 144210812 -109045771 - L1ME3 LINE L1 -578 5586 5396 246 32 0 0 chr2 144210820 144210851 -109045732 + (TG)n Simple_repeat Simple_repeat 1 31 0 1730 219 68 43 chr2 144210889 144211539 -109045044 - L1ME3 LINE L1 -852 5294 4629 2101 113 13 7 chr2 144212073 144212373 -109044210 - AluSg SINE Alu -8 302 1 1577 322 74 32 chr2 144212518 144213608 -109042975 - L2 LINE L2 -8 3305 2174 329 145 16 0 chr2 144214019 144214081 -109042502 + (CA)n Simple_repeat Simple_repeat 2 64 0 717 154 0 0 chr2 144214084 144214201 -109042382 - FLAM_C SINE Alu -26 117 1 4589 177 31 51 chr2 144215044 144215953 -109040630 + MER54A LTR ERVL 10 900 -1 21 0 0 0 chr2 144216949 144216970 -109039613 + AT_rich Low_complexity Low_complexity 1 21 0 235 245 0 19 chr2 144218326 144218379 -109038204 + MIR SINE MIR 81 132 -76 524 252 161 12 chr2 144219492 144219734 -109036849 + LTR16A1 LTR ERVL 177 454 -3 532 355 69 35 chr2 144219765 144219918 -109036665 + HERV16 LTR ERVL 23 169 -4827 1397 214 151 17 chr2 144219918 144220330 -109036253 + MLT1C LTR MaLR 1 467 0 532 355 69 35 chr2 144220330 144220598 -109035985 + HERV16 LTR ERVL 169 474 -4522 2310 83 3 0 chr2 144220598 144220886 -109035697 + AluSp SINE Alu 11 299 -14 532 355 69 35 chr2 144220886 144221072 -109035511 + HERV16 LTR ERVL 474 652 -4344 292 264 22 22 chr2 144221244 144221335 -109035248 + MIR SINE MIR 64 154 -108 435 252 27 20 chr2 144222244 144222391 -109034192 - L1ME4a LINE L1 -199 5922 5775 276 259 58 14 chr2 144222477 144222616 -109033967 - L1ME4a LINE L1 -3 6118 5974 188 228 217 11 chr2 144222866 144222958 -109033625 + MIR3 SINE MIR 50 160 -48 623 158 97 0 chr2 144223138 144223252 -109033331 + FLAM_C SINE Alu 1 125 -18 481 298 29 6 chr2 144223298 144223541 -109033042 - LTR16A1 LTR ERVL 0 457 162 2075 139 0 0 chr2 144223599 144223900 -109032683 + AluSg SINE Alu 1 301 -9 1669 201 53 6 chr2 144224043 144224382 -109032201 + MLT1A1 LTR MaLR 11 365 0 1810 89 0 13 chr2 144224762 144224999 -109031584 + AluSq SINE Alu 47 280 -33 180 0 0 0 chr2 144224999 144225019 -109031564 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 23 33 0 0 chr2 144225317 144225347 -109031236 + AT_rich Low_complexity Low_complexity 1 30 0 398 268 37 30 chr2 144225564 144225728 -109030855 + LTR43 LTR ERV1 132 296 -306 1513 229 137 51 chr2 144225985 144226814 -109029769 - LTR1B LTR ERV1 0 922 1 801 227 99 6 chr2 144227994 144228166 -109028417 + MER5A DNA MER1_type 1 188 -1 183 274 0 39 chr2 144228874 144228925 -109027658 + MER5B DNA MER1_type 1 49 -129 * 368 272 22 11 chr2 144228919 144229011 -109027572 - MER5B DNA MER1_type -82 96 4 552 89 0 0 chr2 144229607 144229686 -109026897 - MADE1 DNA Mariner 0 80 2 198 333 0 0 chr2 144229724 144229772 -109026811 + L2 LINE L2 3210 3257 -15 35 24 0 0 chr2 144230685 144230727 -109025856 + AT_rich Low_complexity Low_complexity 1 42 0 1844 166 3 3 chr2 144232198 144232494 -109024089 + AluSx SINE Alu 1 296 -16 359 325 83 29 chr2 144233061 144233338 -109023245 + MLT1L LTR MaLR 322 613 -2 2003 132 4 4 chr2 144233465 144233766 -109022817 + AluSc SINE Alu 1 301 0 348 301 62 7 chr2 144233923 144234069 -109022514 + HAL1 LINE L1 1152 1305 -1202 227 284 86 0 chr2 144234234 144234350 -109022233 - L1ME3A LINE L1 -9 6161 6036 903 147 7 14 chr2 144234390 144234533 -109022050 - AluSg/x SINE Alu -21 291 150 371 267 45 17 chr2 144234638 144234814 -109021769 - L1ME3A LINE L1 -325 5837 5657 259 200 0 0 chr2 144235301 144235346 -109021237 - L1ME3A LINE L1 -501 5669 5625 431 314 12 6 chr2 144235421 144235593 -109020990 - L1MC4 LINE L1 -146 7896 7724 345 252 207 9 chr2 144236233 144236375 -109020208 - L1MD3 LINE L1 -1058 6750 6604 255 309 43 63 chr2 144236924 144237131 -109019452 - L2 LINE L2 -1857 1457 1255 623 247 32 19 chr2 144237196 144237354 -109019229 - MER5B DNA MER1_type -18 160 1 549 88 0 12 chr2 144237651 144237731 -109018852 - MADE1 DNA Mariner -1 79 1 438 305 5 85 chr2 144238224 144238424 -109018159 - MIR3 SINE MIR -5 203 20 210 278 82 93 chr2 144239571 144239726 -109016857 + L3 LINE CR1 1216 1370 -207 1560 66 0 71 chr2 144239726 144239952 -109016631 - AluY SINE Alu -1 310 101 210 278 82 93 chr2 144239952 144239990 -109016593 + L3 LINE CR1 1370 1407 -170 239 281 26 70 chr2 144240401 144240515 -109016068 + MIR SINE MIR 112 220 -42 214 209 0 0 chr2 144241500 144241543 -109015040 - MIR SINE MIR -67 141 99 910 152 125 76 chr2 144242715 144242939 -109013644 + MER46A DNA MER2_type 2 236 0 2076 132 0 28 chr2 144242981 144243300 -109013283 + AluSx SINE Alu 3 312 0 927 193 39 0 chr2 144245041 144245222 -109011361 + MER5A DNA MER1_type 2 189 0 424 296 56 71 chr2 144245976 144246314 -109010269 + LTR33A LTR ERVL 99 431 -92 389 317 88 15 chr2 144246750 144247012 -109009571 + LTR33 LTR ERVL 229 509 -12 197 428 15 15 chr2 144247034 144247165 -109009418 - MIR SINE MIR -114 148 18 23 33 0 0 chr2 144248305 144248335 -109008248 + AT_rich Low_complexity Low_complexity 1 30 0 2351 65 3 7 chr2 144248414 144248721 -109007862 - L1PA7 LINE L1 -3 6151 5846 259 323 73 10 chr2 144248996 144249092 -109007491 + L2 LINE L2 3151 3252 -20 1040 236 84 58 chr2 144249588 144249626 -109006957 + MLT1C LTR MaLR 6 42 -425 1421 184 23 100 chr2 144249626 144249970 -109006613 - MLT1A1 LTR MaLR 0 365 53 2197 98 7 3 chr2 144249970 144250267 -109006316 + AluSx SINE Alu 1 298 -14 1421 184 23 100 chr2 144250267 144250313 -109006270 - MLT1A1 LTR MaLR -312 53 5 1040 236 84 58 chr2 144250313 144250724 -109005859 + MLT1C LTR MaLR 42 467 0 452 344 38 11 chr2 144251358 144251544 -109005039 - MIR SINE MIR -48 214 24 2004 172 89 5 chr2 144252107 144252462 -109004121 - L1MB2 LINE L1 0 6171 5769 222 37 0 0 chr2 144252462 144252489 -109004094 + (TA)n Simple_repeat Simple_repeat 1 27 0 2004 172 89 5 chr2 144252489 144252581 -109004002 - L1MB2 LINE L1 -402 5769 5686 1675 186 38 3 chr2 144252780 144253173 -109003410 + AluJo SINE Alu 1 403 0 544 89 20 30 chr2 144253072 144253354 -109003229 + (GAAA)n Simple_repeat Simple_repeat 1 281 0 1164 204 33 83 chr2 144253669 144254032 -109002551 - MLT1A1 LTR MaLR 0 365 21 27 49 0 0 chr2 144254092 144254133 -109002450 + AT_rich Low_complexity Low_complexity 1 41 0 2206 92 3 7 chr2 144254491 144254784 -109001799 - AluSc SINE Alu -17 292 1 276 274 38 28 chr2 144255317 144255423 -109001160 + MLT2E LTR ERVL 32 138 -490 617 221 29 88 chr2 144255791 144256098 -109000485 - LTR37B LTR ERV1 -4 464 176 417 319 68 16 chr2 144256133 144256374 -109000209 - MIR SINE MIR -1 261 8 850 271 31 22 chr2 144257052 144257163 -108999420 + MIR SINE MIR 12 121 -141 4338 112 29 37 chr2 144257163 144257860 -108998723 - LTR8 LTR ERV1 0 691 1 850 271 31 22 chr2 144257860 144257977 -108998606 + MIR SINE MIR 121 242 -20 2430 79 0 0 chr2 144258103 144258408 -108998175 + AluY SINE Alu 1 305 -6 264 241 23 23 chr2 144258483 144258570 -108998013 - MLT1J1 LTR MaLR -15 431 345 935 196 15 15 chr2 144258607 144258806 -108997777 - MLT1B LTR MaLR 0 390 192 725 233 167 12 chr2 144258878 144259136 -108997447 - MLT1J1 LTR MaLR -136 310 13 358 355 53 48 chr2 144261094 144261283 -108995300 + MIR SINE MIR 20 209 -53 1894 195 8 6 chr2 144262290 144262654 -108993929 - MLT1A1 LTR MaLR 0 365 1 202 244 0 0 chr2 144264626 144264671 -108991912 + A-rich Low_complexity Low_complexity 1 45 0 219 357 54 0 chr2 144265406 144265518 -108991065 + MIR SINE MIR 33 150 -58 189 115 0 0 chr2 144265760 144265786 -108990797 + MIR SINE MIR 162 187 -75 1164 194 18 4 chr2 144267504 144267731 -108988852 - MLT1D LTR MaLR -4 501 272 459 286 24 8 chr2 144267783 144267909 -108988674 - HAL1 LINE L1 -1313 1194 1067 1921 180 40 3 chr2 144268580 144268930 -108987653 + MLT1A1 LTR MaLR 1 363 -2 23 86 0 0 chr2 144270307 144270365 -108986218 + AT_rich Low_complexity Low_complexity 1 58 0 24 85 0 0 chr2 144270382 144270441 -108986142 + AT_rich Low_complexity Low_complexity 1 59 0 634 203 0 0 chr2 144271077 144271221 -108985362 + FLAM_C SINE Alu 2 145 0 280 287 18 60 chr2 144271441 144271604 -108984979 - MIR SINE MIR -64 198 43 276 270 25 66 chr2 144272021 144272217 -108984366 - LTR67 LTR ERVL -8 549 362 2403 100 0 0 chr2 144272540 144272849 -108983734 - AluSx SINE Alu -3 309 1 4817 109 7 4 chr2 144272889 144273596 -108982987 - L1PB3 LINE L1 -7 6147 5439 234 266 202 0 chr2 144273721 144273830 -108982753 + MIR SINE MIR 67 197 -65 347 126 15 0 chr2 144274325 144274394 -108982189 - L1ME1 LINE L1 -18 6148 6088 681 216 22 41 chr2 144274426 144274662 -108981921 - LTR12 LTR ERV1 -142 572 239 354 294 25 42 chr2 144274896 144275015 -108981568 - L1ME1 LINE L1 -93 6073 5957 21 0 0 0 chr2 144275390 144275411 -108981172 + AT_rich Low_complexity Low_complexity 1 21 0 4907 81 22 0 chr2 144275899 144276545 -108980038 - PABL_A LTR ERV1 0 660 1 1411 151 0 54 chr2 144277087 144277346 -108979237 + AluJo SINE Alu 37 281 -31 207 0 0 0 chr2 144277352 144277375 -108979208 + (CAA)n Simple_repeat Simple_repeat 3 25 0 313 265 137 8 chr2 144277715 144277832 -108978751 - MIR3 SINE MIR -9 199 68 259 357 54 0 chr2 144278352 144278481 -108978102 + LTR33A LTR ERVL 69 204 -319 508 248 40 0 chr2 144278774 144278899 -108977684 - MIR SINE MIR -20 242 113 187 176 0 29 chr2 144279680 144279718 -108976865 + MIR SINE MIR 69 103 -159 220 320 27 0 chr2 144279762 144279837 -108976746 - L3 LINE CR1 -976 601 525 314 329 106 68 chr2 144280993 144281391 -108975192 + L3 LINE CR1 47 459 -1118 342 188 47 12 chr2 144281398 144281483 -108975100 + MER103 DNA DNA 78 165 -1 558 369 62 10 chr2 144281587 144281877 -108974706 + L3 LINE CR1 1067 1371 -206 361 294 116 20 chr2 144281942 144282088 -108974495 + MIR SINE MIR 91 250 -12 5895 116 10 1 chr2 144282815 144284025 -108972558 + L1PA13 LINE L1 4924 6142 -21 786 200 22 11 chr2 144284539 144284719 -108971864 + MER58 DNA MER1_type 1 182 -2238 24 0 0 0 chr2 144284735 144284759 -108971824 + AT_rich Low_complexity Low_complexity 1 24 0 385 239 180 24 chr2 144284763 144284930 -108971653 - MIR SINE MIR -38 224 32 2324 96 0 0 chr2 144285008 144285301 -108971282 + AluSx SINE Alu 1 293 -19 327 274 10 20 chr2 144285372 144285474 -108971109 - MIR SINE MIR -37 225 125 24 0 0 0 chr2 144287471 144287495 -108969088 + AT_rich Low_complexity Low_complexity 1 24 0 2137 244 171 46 chr2 144288079 144288995 -108967588 - HAL1 LINE L1 -4 2503 1364 1563 198 34 3 chr2 144288995 144289288 -108967295 + AluJo SINE Alu 1 302 -10 2137 244 171 46 chr2 144289288 144289714 -108966869 - HAL1 LINE L1 -1143 1364 993 286 321 43 47 chr2 144289743 144290020 -108966563 - HAL1 LINE L1 -1602 905 630 381 235 34 17 chr2 144290163 144290282 -108966301 + MIR SINE MIR 131 251 -11 * 587 286 61 42 chr2 144290263 144290504 -108966079 - MIR SINE MIR 0 262 16 203 353 181 19 chr2 144290750 144291529 -108965054 + L2 LINE L2 1698 2602 -712 211 269 75 15 chr2 144292421 144292488 -108964095 + MER5C DNA MER1_type 3 73 -251 2620 55 0 0 chr2 144292505 144292846 -108963737 + AluY SINE Alu 1 341 0 2095 110 10 7 chr2 144293053 144293343 -108963240 - AluSg SINE Alu -19 291 1 290 247 59 12 chr2 144293484 144293569 -108963014 + MIR SINE MIR 130 218 -44 28 48 0 0 chr2 144293705 144293747 -108962836 + AT_rich Low_complexity Low_complexity 1 42 0 2266 109 3 6 chr2 144293958 144294270 -108962313 - AluSx SINE Alu 0 312 2 191 299 78 13 chr2 144296817 144296894 -108959689 - MIR3 SINE MIR -23 185 104 1250 233 93 28 chr2 144296976 144297405 -108959178 - MER4C LTR ERV1 -8 457 1 253 273 139 58 chr2 144297797 144297850 -108958733 + L3 LINE CR1 1328 1375 -202 2254 101 3 0 chr2 144297850 144298157 -108958426 + AluSx SINE Alu 1 308 -4 253 273 139 58 chr2 144298157 144298275 -108958308 + L3 LINE CR1 1375 1513 -64 30 27 0 0 chr2 144299439 144299476 -108957107 + AT_rich Low_complexity Low_complexity 1 37 0 377 152 5 68 chr2 144300198 144300389 -108956194 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 333 163 28 67 chr2 144300407 144300585 -108955998 + (TATAA)n Simple_repeat Simple_repeat 2 172 0 395 160 28 52 chr2 144300596 144300956 -108955627 + (TATAA)n Simple_repeat Simple_repeat 1 351 0 398 182 41 29 chr2 144300967 144301137 -108955446 + (TA)n Simple_repeat Simple_repeat 2 173 0 2111 53 68 0 chr2 144301159 144301446 -108955137 - AluY SINE Alu 0 305 1 31 58 0 0 chr2 144301450 144301502 -108955081 + AT_rich Low_complexity Low_complexity 1 52 0 2288 81 3 10 chr2 144301932 144302229 -108954354 - AluY SINE Alu -14 297 3 404 257 57 9 chr2 144303415 144303520 -108953063 + L2 LINE L2 3204 3313 0 339 274 46 46 chr2 144303518 144303671 -108952912 - MIR SINE MIR -1 261 109 * 1989 117 18 0 chr2 144303762 144304043 -108952540 - AluSx SINE Alu -26 286 1 341 323 85 42 chr2 144304737 144304926 -108951657 - MIR SINE MIR -19 243 47 1515 209 33 42 chr2 144305353 144305872 -108950711 - MER34B LTR ERV1 0 565 1 526 350 11 4 chr2 144306132 144306392 -108950191 - L1ME LINE L1 -530 5632 5371 21 71 0 0 chr2 144306655 144306697 -108949886 + AT_rich Low_complexity Low_complexity 1 42 0 666 96 11 0 chr2 144307770 144307894 -108948689 + AluSg/x SINE Alu 187 311 0 1438 171 194 78 chr2 144308094 144308557 -108948026 - MLT2B1 LTR ERVL -3 517 1 30 83 0 0 chr2 144308590 144308662 -108947921 + AT_rich Low_complexity Low_complexity 1 72 0 243 0 0 0 chr2 144309495 144309522 -108947061 + (T)n Simple_repeat Simple_repeat 1 27 0 300 217 122 26 chr2 144309718 144309833 -108946750 + MER117 DNA MER1_type 1 126 -71 197 250 13 53 chr2 144309858 144309934 -108946649 - L2 LINE L2 -267 3005 2933 362 332 88 34 chr2 144310083 144310288 -108946295 - L2 LINE L2 -562 2752 2537 2254 108 7 0 chr2 144310484 144310781 -108945802 + AluSx SINE Alu 1 299 -13 5627 181 21 18 chr2 144310816 144312462 -108944121 - L1MC1 LINE L1 -17 6316 4668 21 0 0 0 chr2 144312462 144312483 -108944100 + AT_rich Low_complexity Low_complexity 1 21 0 188 182 0 36 chr2 144312569 144312624 -108943959 + (TATATG)n Simple_repeat Simple_repeat 6 58 0 4457 166 66 48 chr2 144312629 144313538 -108943045 - MER21A LTR ERV1 -6 925 1 324 273 16 0 chr2 144313539 144313667 -108942916 + (TA)n Simple_repeat Simple_repeat 2 131 0 26157 138 20 10 chr2 144313706 144314877 -108941706 + L1PA8A LINE L1 4 1161 -5285 210 91 0 0 chr2 144314877 144314910 -108941673 + (CAA)n Simple_repeat Simple_repeat 1 33 0 26157 138 20 10 chr2 144314910 144320046 -108936537 + L1PA8A LINE L1 1161 6442 -4 28 0 0 0 chr2 144320132 144320160 -108936423 + AT_rich Low_complexity Low_complexity 1 28 0 272 203 68 0 chr2 144320304 144320363 -108936220 + MER94 DNA DNA 72 134 0 348 238 69 10 chr2 144321074 144321175 -108935408 + MIR SINE MIR 141 247 -15 624 287 68 21 chr2 144321694 144321931 -108934652 - MIR SINE MIR -3 259 12 186 355 53 32 chr2 144321979 144322168 -108934415 + L2 LINE L2 2852 3044 -228 448 233 17 52 chr2 144322396 144322568 -108934015 + MER104 DNA Tc2 15 180 0 1041 195 28 138 chr2 144323253 144323628 -108932955 - MER58B DNA MER1_type -10 331 1 1753 189 3 3 chr2 144324339 144324635 -108931948 - AluJo SINE Alu -14 298 3 2385 11 0 0 chr2 144324867 144325138 -108931445 + L1PA3 LINE L1 5885 6155 0 408 339 70 47 chr2 144325436 144325837 -108930746 + L2 LINE L2 1237 1646 -1668 213 224 12 47 chr2 144325847 144325932 -108930651 + (TCTCTG)n Simple_repeat Simple_repeat 2 83 0 32 26 0 0 chr2 144329203 144329242 -108927341 + AT_rich Low_complexity Low_complexity 1 39 0 3588 105 8 0 chr2 144329878 144330402 -108926181 - L1PA14 LINE L1 -3 6158 5631 3121 146 38 3 chr2 144330404 144331288 -108925295 + L1PA14 LINE L1 4732 5644 -517 324 70 0 0 chr2 144332324 144332367 -108924216 + (CA)n Simple_repeat Simple_repeat 2 44 0 685 263 136 9 chr2 144333665 144333878 -108922705 - MIR SINE MIR -21 241 2 355 343 78 10 chr2 144334026 144334230 -108922353 - MIR SINE MIR -10 252 35 1260 312 96 13 chr2 144334410 144334912 -108921671 + L2 LINE L2 2207 2666 -647 596 234 18 83 chr2 144334912 144335130 -108921453 - MER3 DNA MER1_type -1 208 5 1260 312 96 13 chr2 144335130 144335603 -108920980 + L2 LINE L2 2666 3273 -40 30 45 0 0 chr2 144337121 144337165 -108919418 + AT_rich Low_complexity Low_complexity 1 44 0 254 327 75 28 chr2 144338031 144338138 -108918445 + L2 LINE L2 3161 3272 0 577 336 26 13 chr2 144338677 144338906 -108917677 + MIR SINE MIR 31 262 0 812 319 139 11 chr2 144339374 144339439 -108917144 - L2 LINE L2 -7 3306 3251 197 65 32 0 chr2 144339439 144339470 -108917113 + (CAA)n Simple_repeat Simple_repeat 3 34 0 812 319 139 11 chr2 144339470 144339786 -108916797 - L2 LINE L2 -62 3251 2876 301 318 14 0 chr2 144340139 144340236 -108916347 - MIR SINE MIR -41 167 67 619 312 26 41 chr2 144341806 144342072 -108914511 - MIR SINE MIR 0 262 1 957 289 106 26 chr2 144342487 144342902 -108913681 + MLT1J LTR MaLR 2 449 -62 218 336 112 15 chr2 144343337 144343471 -108913112 - MER5A DNA MER1_type 0 189 43 * 244 321 128 9 chr2 144343365 144343474 -108913109 + MER5A DNA MER1_type 40 161 -28 383 264 76 46 chr2 144343618 144343815 -108912768 - MIR SINE MIR 0 262 60 237 33 0 0 chr2 144344112 144344142 -108912441 + (CA)n Simple_repeat Simple_repeat 2 31 0 2065 155 0 3 chr2 144344316 144344625 -108911958 - AluSx SINE Alu -4 308 1 251 243 33 127 chr2 144347056 144347238 -108909345 - MIR SINE MIR -78 130 8 2168 134 0 0 chr2 144347468 144347767 -108908816 + AluSg SINE Alu 1 299 -11 5297 316 74 30 chr2 144349096 144350345 -108906238 + L2 LINE L2 183 1375 -1938 3714 119 87 7 chr2 144350345 144350941 -108905642 - LTR9B LTR ERV1 0 644 1 5297 316 74 30 chr2 144350941 144351640 -108904943 + L2 LINE L2 1375 2042 -1271 192 40 0 0 chr2 144351640 144351665 -108904918 + (TC)n Simple_repeat Simple_repeat 2 26 0 5297 316 74 30 chr2 144351665 144352284 -108904299 + L2 LINE L2 2042 3306 -7 410 259 100 46 chr2 144352713 144352952 -108903631 - LTR33A LTR ERVL -3 520 269 2084 157 0 0 chr2 144354430 144354723 -108901860 + AluSx SINE Alu 1 293 -19 204 388 96 34 chr2 144354741 144355097 -108901486 - L2 LINE L2 -357 2957 2580 1779 217 61 60 chr2 144355098 144355732 -108900851 + LTR28 LTR ERV1 2 654 -349 358 213 57 85 chr2 144355748 144355889 -108900694 + LTR27 LTR ERV1 500 636 0 1064 204 91 106 chr2 144355987 144356449 -108900134 + LTR16A1 LTR ERVL 1 455 -2 577 308 120 0 chr2 144356452 144356702 -108899881 - L2 LINE L2 -958 2356 2077 997 269 61 39 chr2 144357620 144358077 -108898506 + MLT1C LTR MaLR 1 467 0 390 302 132 15 chr2 144358184 144358389 -108898194 - MIR SINE MIR -28 234 6 429 214 71 27 chr2 144359686 144359798 -108896785 + MIR SINE MIR 26 142 -120 947 202 11 5 chr2 144360845 144361033 -108895550 - MER5A DNA MER1_type 0 189 1 299 264 42 90 chr2 144361048 144361192 -108895391 + MIR SINE MIR 17 153 -55 842 291 134 30 chr2 144361215 144361707 -108894876 - MLT1K LTR MaLR -29 559 17 426 281 103 30 chr2 144361937 144362157 -108894426 + MIR SINE MIR 3 250 -12 201 74 0 0 chr2 144364106 144364133 -108892450 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 1019 327 204 13 chr2 144364317 144365214 -108891369 - L2 LINE L2 -441 2873 1806 1010 276 87 86 chr2 144365220 144365554 -108891029 - L2 LINE L2 -9 3304 2972 3288 64 5 0 chr2 144365554 144365976 -108890607 + L1PA6 LINE L1 5716 6139 -15 1010 276 87 86 chr2 144365976 144366462 -108890121 - L2 LINE L2 -341 2972 2453 1798 153 2 78 chr2 144366580 144366646 -108889937 - MLT1B LTR MaLR 0 390 321 2131 121 0 0 chr2 144366646 144366957 -108889626 + AluSg SINE Alu 1 311 0 1798 153 2 78 chr2 144366957 144367287 -108889296 - MLT1B LTR MaLR -69 321 23 531 336 44 44 chr2 144368039 144368268 -108888315 + MIR SINE MIR 21 249 -13 267 172 184 0 chr2 144368427 144368514 -108888069 - MER45 DNA AcHobo -21 1560 1458 * 329 284 87 0 chr2 144368507 144368634 -108887949 - MER45 DNA AcHobo -847 193 56 207 0 0 0 chr2 144369345 144369368 -108887215 + (A)n Simple_repeat Simple_repeat 1 23 0 257 331 90 24 chr2 144369671 144369837 -108886746 + MIR3 SINE MIR 25 201 -7 2778 99 0 0 chr2 144370313 144370676 -108885907 + THE1B LTR MaLR 1 363 -1 1901 145 3 0 chr2 144371652 144371963 -108884620 + AluSx SINE Alu 1 312 0 1849 187 52 3 chr2 144372123 144372471 -108884112 - MLT1A1 LTR MaLR 0 365 1 320 350 32 13 chr2 144372629 144372786 -108883797 + LTR67 LTR ERVL 83 242 -315 301 302 101 13 chr2 144372968 144373117 -108883466 + LTR67 LTR ERVL 369 530 -27 272 205 72 36 chr2 144373730 144373813 -108882770 - MIR SINE MIR -40 222 137 369 0 0 0 chr2 144375047 144375088 -108881495 + (TG)n Simple_repeat Simple_repeat 2 42 0 254 143 0 0 chr2 144375396 144375443 -108881140 - MER45 DNA AcHobo -3 1578 1532 200 338 0 52 chr2 144375962 144376039 -108880544 + L2 LINE L2 3241 3313 0 180 0 0 0 chr2 144377375 144377395 -108879188 + (A)n Simple_repeat Simple_repeat 1 20 0 180 0 0 0 chr2 144377943 144377963 -108878620 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 2274 123 7 0 chr2 144378436 144378746 -108877837 + AluSx SINE Alu 1 312 0 340 183 26 17 chr2 144379215 144379330 -108877253 + CT-rich Low_complexity Low_complexity 1 116 0 1968 132 0 38 chr2 144379330 144379761 -108876822 - AluSx SINE Alu 0 419 1 187 403 81 5 chr2 144380311 144380522 -108876061 + L2 LINE L2 2561 2787 -527 2069 253 41 13 chr2 144380643 144381322 -108875261 - L1MC4a LINE L1 -5 7803 7106 275 371 32 78 chr2 144381339 144381687 -108874896 + L2 LINE L2 2941 3272 0 206 160 20 0 chr2 144382337 144382387 -108874196 + (CAT)n Simple_repeat Simple_repeat 1 51 0 190 167 0 0 chr2 144382665 144382701 -108873882 + L2 LINE L2 3273 3308 -5 247 400 31 6 chr2 144382972 144383132 -108873451 + L2 LINE L2 2508 2671 -643 323 212 15 0 chr2 144383510 144383576 -108873007 + Tigger2 DNA MER2_type 1 67 -2651 * 2351 167 9 13 chr2 144383562 144384016 -108872567 + Tigger2 DNA MER2_type 2267 2718 0 574 259 131 56 chr2 144384100 144384475 -108872108 - MLT1J2 LTR MaLR -21 429 27 359 305 167 23 chr2 144384577 144384751 -108871832 + MIR SINE MIR 20 218 -44 253 322 52 17 chr2 144384781 144384896 -108871687 - L2 LINE L2 -5 3267 3149 898 258 41 0 chr2 144385057 144385328 -108871255 + L1ME3 LINE L1 5465 5746 -424 345 247 0 0 chr2 144385326 144385403 -108871180 + L1ME3 LINE L1 5998 6074 -88 * 207 214 0 0 chr2 144385450 144385492 -108871091 + (TAA)n Simple_repeat Simple_repeat 1 42 0 21 0 0 0 chr2 144386323 144386344 -108870239 + AT_rich Low_complexity Low_complexity 1 21 0 401 226 0 170 chr2 144387349 144387508 -108869075 + L2 LINE L2 1117 1248 -2066 509 270 58 23 chr2 144387568 144387742 -108868841 - MIR SINE MIR -81 181 2 * 662 301 106 42 chr2 144387742 144388129 -108868454 + L2 LINE L2 1257 1669 -1645 597 241 100 30 chr2 144388172 144388517 -108868066 + MLT1I LTR MaLR 66 402 -7 1421 302 107 68 chr2 144388542 144389927 -108866656 + L2 LINE L2 1701 3154 -159 1910 170 0 0 chr2 144389927 144390215 -108866368 - AluSx SINE Alu -24 288 1 1421 302 107 68 chr2 144390215 144390382 -108866201 + L2 LINE L2 3154 3313 0 1472 80 15 0 chr2 144390577 144390776 -108865807 - L1PA7 LINE L1 -1 6153 5952 11391 141 18 107 chr2 144390776 144393573 -108863010 - L1P LINE L1 -3589 2557 12 254 348 34 8 chr2 144395099 144395217 -108861366 + MIR SINE MIR 20 140 -122 201 250 42 0 chr2 144395321 144395369 -108861214 + MIR SINE MIR 91 140 -122 263 236 0 0 chr2 144395609 144395664 -108860919 + CT-rich Low_complexity Low_complexity 1 55 0 390 155 295 47 chr2 144396508 144396637 -108859946 - MLT1E LTR MaLR -432 161 1 1637 197 47 26 chr2 144397709 144398089 -108858494 - MLT1B LTR MaLR -2 388 1 346 323 92 37 chr2 144398090 144398492 -108858091 + L2 LINE L2 1907 2330 -984 753 316 15 48 chr2 144398521 144398857 -108857726 - L2 LINE L2 0 3313 2989 202 359 84 56 chr2 144399082 144399369 -108857214 + L2 LINE L2 2433 2727 -587 197 174 0 22 chr2 144401216 144401262 -108855321 + CT-rich Low_complexity Low_complexity 3 47 0 203 196 174 0 chr2 144401282 144401328 -108855255 - L2 LINE L2 -14 3299 3246 3844 186 35 58 chr2 144401657 144402539 -108854044 + MER21B LTR ERV1 1 862 -1 3349 228 57 21 chr2 144403188 144404355 -108852228 - L1MD2 LINE L1 -19 6340 5130 30 27 0 0 chr2 144404355 144404392 -108852191 + AT_rich Low_complexity Low_complexity 1 37 0 1129 241 57 23 chr2 144404475 144404861 -108851722 + L1ME3A LINE L1 5771 6169 -1 1186 205 103 78 chr2 144405198 144405685 -108850898 - L1ME1 LINE L1 -4 6162 5664 252 286 14 0 chr2 144405726 144405796 -108850787 - Charlie8 DNA MER1_type -3 2414 2344 1189 197 25 105 chr2 144406020 144406345 -108850238 + AluJo SINE Alu 1 299 -3 257 311 95 5 chr2 144406345 144406491 -108850092 + MIR SINE MIR 15 169 -78 6523 86 7 0 chr2 144406763 144407804 -108848779 - L1PA11 LINE L1 -1 6173 5128 269 139 0 0 chr2 144408021 144408064 -108848519 + L2 LINE L2 3240 3282 -31 288 314 10 29 chr2 144408287 144408389 -108848194 + MIR3 SINE MIR 101 200 -8 258 313 0 0 chr2 144408474 144408538 -108848045 + MER5A DNA MER1_type 26 89 -100 24 0 0 0 chr2 144409112 144409136 -108847447 + AT_rich Low_complexity Low_complexity 1 24 0 300 363 128 33 chr2 144409448 144409837 -108846746 - L2 LINE L2 -10 3262 2837 189 0 0 0 chr2 144410083 144410104 -108846479 + (A)n Simple_repeat Simple_repeat 1 21 0 208 185 24 39 chr2 144410509 144410721 -108845862 + (CA)n Simple_repeat Simple_repeat 1 208 0 271 268 16 32 chr2 144410738 144410861 -108845722 + (CA)n Simple_repeat Simple_repeat 2 122 0 321 89 0 0 chr2 144411614 144411659 -108844924 + (CATA)n Simple_repeat Simple_repeat 2 46 0 251 302 35 23 chr2 144411962 144412048 -108844535 - L2 LINE L2 0 3313 3227 559 318 86 68 chr2 144412965 144413549 -108843034 - L2 LINE L2 -1 3271 2640 220 263 18 0 chr2 144413560 144413617 -108842966 - L2 LINE L2 -28 3244 3187 3701 268 106 52 chr2 144413658 144415663 -108840920 + L2 LINE L2 1201 3313 0 751 324 70 30 chr2 144417380 144417849 -108838734 + L2 LINE L2 2808 3295 -18 284 198 55 44 chr2 144418188 144418279 -108838304 - L1ME LINE L1 -257 5864 5773 252 279 30 28 chr2 144418451 144418644 -108837939 - L1ME LINE L1 -724 5430 5265 390 286 93 61 chr2 144419014 144419325 -108837258 - L1ME LINE L1 -1329 4817 4497 223 325 135 1 chr2 144420372 144420502 -108836081 - MIR SINE MIR -51 157 28 642 232 55 0 chr2 144420556 144420720 -108835863 - MER5B DNA MER1_type -3 175 3 2551 69 25 116 chr2 144421446 144421740 -108834843 + L1PA11 LINE L1 5764 6005 -169 2058 141 23 0 chr2 144421740 144422044 -108834539 + AluSx SINE Alu 1 311 -1 2551 69 25 116 chr2 144422044 144422197 -108834386 + L1PA11 LINE L1 6005 6170 -4 1985 152 22 30 chr2 144422217 144422585 -108833998 - MLT1A1 LTR MaLR 0 365 1 2371 97 0 7 chr2 144426533 144426841 -108829742 + AluSg SINE Alu 1 306 -4 3462 220 16 8 chr2 144426847 144427643 -108828940 - Charlie1 DNA MER1_type -310 2451 1649 279 308 205 15 chr2 144430262 144430457 -108826126 - MIR SINE MIR 0 262 31 205 334 97 43 chr2 144430565 144430861 -108825722 + L2 LINE L2 2714 3020 -252 186 265 44 15 chr2 144430997 144431065 -108825518 + L2 LINE L2 3203 3272 0 366 294 105 0 chr2 144431156 144431278 -108825305 - MIR SINE MIR -58 150 25 196 256 0 0 chr2 144432903 144432942 -108823641 + MER5B DNA MER1_type 140 178 0 557 255 5 115 chr2 144433394 144433603 -108822980 - MIR3 SINE MIR -62 146 3 944 264 50 18 chr2 144433772 144434154 -108822429 + MER20B DNA MER1_type 21 414 -369 234 237 136 58 chr2 144435283 144435386 -108821197 - MER5A DNA MER1_type -58 131 16 22 70 0 0 chr2 144435500 144435543 -108821040 + AT_rich Low_complexity Low_complexity 1 43 0 2927 137 12 2 chr2 144435910 144436391 -108820192 + LTR19A LTR ERV1 1 486 0 240 211 88 0 chr2 144436687 144436744 -108819839 - MIR3 SINE MIR -1 207 146 343 140 9 122 chr2 144436746 144436853 -108819730 + L2 LINE L2 2451 2545 -769 2192 109 7 0 chr2 144436854 144437138 -108819445 + AluSp SINE Alu 1 286 -27 370 88 106 0 chr2 144437138 144437298 -108819285 + (TA)n Simple_repeat Simple_repeat 1 177 0 211 77 96 0 chr2 144437310 144437362 -108819221 + (TA)n Simple_repeat Simple_repeat 2 58 0 324 64 0 0 chr2 144437467 144437514 -108819069 + (TA)n Simple_repeat Simple_repeat 1 47 0 1100 280 116 25 chr2 144437517 144438128 -108818455 + L2 LINE L2 2224 3087 -226 922 208 10 30 chr2 144438358 144438555 -108818028 + MER58A DNA MER1_type 3 195 -29 2135 122 0 3 chr2 144439431 144439717 -108816866 - AluSx SINE Alu -27 285 1 500 217 9 0 chr2 144440468 144440574 -108816009 + MER3 DNA MER1_type 40 146 -63 674 163 66 0 chr2 144440691 144440857 -108815726 + MER3 DNA MER1_type 2426 2602 0 333 252 113 13 chr2 144441259 144441418 -108815165 + MIR SINE MIR 82 256 -6 1036 275 31 21 chr2 144441458 144442126 -108814457 - L1ME3A LINE L1 -28 6142 5386 2387 87 3 0 chr2 144442564 144442864 -108813719 + AluSx SINE Alu 1 301 -11 319 188 19 66 chr2 144443608 144443755 -108812828 + MLT1H1 LTR MaLR 434 549 0 309 299 11 0 chr2 144443835 144443922 -108812661 - L2 LINE L2 -3 3310 3223 1602 219 0 3 chr2 144444637 144444924 -108811659 + AluJb SINE Alu 6 291 -21 471 241 81 46 chr2 144446361 144446535 -108810048 + MLT1J LTR MaLR 1 180 -331 225 186 23 0 chr2 144446926 144446969 -108809614 + GA-rich Low_complexity Low_complexity 2 45 0 314 301 63 16 chr2 144447237 144447388 -108809195 + MIR SINE MIR 3 158 -65 1649 177 64 80 chr2 144448430 144448943 -108807640 + MLT1D LTR MaLR 1 505 0 362 195 12 0 chr2 144449329 144449411 -108807172 + CT-rich Low_complexity Low_complexity 3 85 0 249 253 13 0 chr2 144449557 144449636 -108806947 + L1MB7 LINE L1 6105 6184 0 574 200 62 0 chr2 144449816 144449946 -108806637 - L1MD3 LINE L1 -2 7993 7856 1712 301 138 33 chr2 144450335 144451582 -108805001 - L2 LINE L2 0 3313 1868 959 148 12 6 chr2 144451582 144451751 -108804832 - MER65C LTR ERV1 0 461 292 662 204 121 37 chr2 144451765 144452013 -108804570 - MLT1E1 LTR MaLR -352 302 6 842 183 0 0 chr2 144452079 144452265 -108804318 - FRAM SINE Alu 0 201 16 228 86 0 0 chr2 144452492 144452527 -108804056 + (TAA)n Simple_repeat Simple_repeat 3 37 0 299 282 134 7 chr2 144452527 144452669 -108803914 - MIR SINE MIR -15 247 88 269 281 42 141 chr2 144453147 144453339 -108803244 + L2 LINE L2 3007 3179 -93 214 284 12 37 chr2 144455603 144455684 -108800899 - MIR SINE MIR -116 146 68 21 0 0 0 chr2 144455907 144455928 -108800655 + AT_rich Low_complexity Low_complexity 1 21 0 477 292 141 10 chr2 144456785 144457083 -108799500 + L2 LINE L2 1493 1829 -1485 1339 223 234 44 chr2 144457115 144457755 -108798828 - L1MC4 LINE L1 -2 8040 7279 1301 264 108 8 chr2 144457771 144458292 -108798291 + MLT2F LTR ERVL 3 622 -41 392 209 12 0 chr2 144458396 144458482 -108798101 - L1MC4 LINE L1 -811 7231 7145 653 330 107 40 chr2 144458610 144459187 -108797396 + L2 LINE L2 2684 3310 -3 31 26 0 0 chr2 144459338 144459376 -108797207 + AT_rich Low_complexity Low_complexity 1 38 0 862 182 0 28 chr2 144459584 144459727 -108796856 + FRAM SINE Alu 15 153 -23 21 71 0 0 chr2 144460920 144460962 -108795621 + AT_rich Low_complexity Low_complexity 1 42 0 6402 38 1 0 chr2 144462098 144463270 -108793313 - L1PA5 LINE L1 -379 5776 4603 3011 51 0 0 chr2 144463270 144463642 -108792941 + L1PA5 LINE L1 5778 6150 -4 2046 159 67 27 chr2 144464196 144464598 -108791985 + MSTC LTR MaLR 1 418 -10 25 0 0 0 chr2 144465000 144465025 -108791558 + AT_rich Low_complexity Low_complexity 1 25 0 339 43 0 0 chr2 144467712 144467758 -108788825 + MADE1 DNA Mariner 1 46 -34 299 256 94 49 chr2 144467910 144468113 -108788470 - HAL1 LINE L1 -6 2501 2290 1847 163 7 7 chr2 144468129 144468430 -108788153 - AluSx SINE Alu -11 301 1 983 240 67 50 chr2 144468442 144468509 -108788074 - L1ME1 LINE L1 -5 6161 6097 192 77 0 0 chr2 144468509 144468535 -108788048 + (CATATA)n Simple_repeat Simple_repeat 6 31 0 983 240 67 50 chr2 144468535 144468884 -108787699 - L1ME1 LINE L1 -69 6097 5738 1601 189 10 20 chr2 144468903 144469200 -108787383 + AluJo SINE Alu 1 294 -18 873 275 111 70 chr2 144469224 144470207 -108786376 - HAL1 LINE L1 -217 2290 1268 362 174 29 0 chr2 144470318 144470387 -108786196 + MER116 DNA Mariner 10 80 0 810 326 68 39 chr2 144470414 144470930 -108785653 - HAL1 LINE L1 -1551 956 426 231 368 53 0 chr2 144471555 144471688 -108784895 - HAL1 LINE L1 -2367 140 1 249 219 94 42 chr2 144472516 144472612 -108783971 - MER102b DNA MER1_type -9 332 232 200 197 56 14 chr2 144472641 144472712 -108783871 + (TAAA)n Simple_repeat Simple_repeat 4 77 0 1652 171 3 30 chr2 144472859 144473163 -108783420 + AluJo SINE Alu 1 296 -16 1026 134 143 19 chr2 144476632 144476848 -108779735 + MLT1A1 LTR MaLR 123 365 0 228 306 194 8 chr2 144476878 144477002 -108779581 + L2 LINE L2 3159 3305 -8 2164 117 107 52 chr2 144477185 144477586 -108778997 - MER57B LTR ERV1 -10 424 2 347 237 66 53 chr2 144477685 144477932 -108778651 - LTR16A1 LTR ERVL -18 473 168 211 115 39 39 chr2 144478795 144478847 -108777736 + (CATATA)n Simple_repeat Simple_repeat 3 54 0 204 250 33 17 chr2 144479958 144480018 -108776565 + L2 LINE L2 3187 3247 -66 21 0 0 0 chr2 144480919 144480940 -108775643 + AT_rich Low_complexity Low_complexity 1 21 0 252 337 0 0 chr2 144480981 144481067 -108775516 + L1ME2 LINE L1 140 225 -6171 2916 235 41 53 chr2 144481493 144482757 -108773826 + L1ME2 LINE L1 2096 3305 -2910 2097 246 72 75 chr2 144482757 144482867 -108773716 + L1ME2 LINE L1 3541 3650 -2565 1708 189 0 3 chr2 144482867 144483179 -108773404 + AluSx SINE Alu 1 311 -1 2097 246 72 75 chr2 144483179 144484315 -108772268 + L1ME2 LINE L1 3650 4783 -1432 2188 236 56 22 chr2 144484346 144485154 -108771429 + L1ME2 LINE L1 5118 5966 -267 16957 201 27 17 chr2 144485199 144491962 -108764621 + L1PA16 LINE L1 28 6861 -8 654 246 69 10 chr2 144491978 144492181 -108764402 + L1ME2 LINE L1 6000 6214 -19 182 195 0 24 chr2 144492501 144492542 -108764041 - L2 LINE L2 0 3272 3233 5089 168 23 5 chr2 144492557 144493419 -108763164 + MSTA-int LTR MaLR 773 1650 -1 2410 130 79 8 chr2 144493422 144493815 -108762768 + MSTA LTR MaLR 3 423 -5 224 365 146 0 chr2 144493816 144493912 -108762671 - L2 LINE L2 -47 3225 3116 494 344 0 16 chr2 144494042 144494225 -108762358 - MIR SINE MIR -73 189 10 252 297 79 30 chr2 144494241 144494342 -108762241 - L2 LINE L2 -204 3068 2963 1843 122 40 49 chr2 144494488 144494792 -108761791 + AluSg SINE Alu 1 301 -9 235 243 78 39 chr2 144495854 144495957 -108760626 + MIR SINE MIR 16 122 -86 935 308 63 16 chr2 144497337 144497778 -108758805 - LTR16B LTR ERVL 0 464 3 294 283 0 11 chr2 144498927 144499019 -108757564 - HERV16 LTR ERVL -4567 429 339 763 294 44 4 chr2 144499406 144499681 -108756902 - LTR16C LTR ERVL -78 413 128 328 337 74 21 chr2 144499966 144500074 -108756509 + MIR SINE MIR 20 144 -118 198 0 108 0 chr2 144500074 144500111 -108756472 + T-rich Low_complexity Low_complexity 2 42 0 328 337 74 21 chr2 144500111 144500192 -108756391 + MIR SINE MIR 144 219 -43 1023 325 59 2 chr2 144500326 144500751 -108755832 + LTR33 LTR ERVL 5 453 -68 211 205 0 0 chr2 144500984 144501023 -108755560 + (CA)n Simple_repeat Simple_repeat 2 40 0 301 299 192 34 chr2 144502614 144502791 -108753792 - MIR SINE MIR -53 209 5 2292 101 10 7 chr2 144504724 144505032 -108751551 - AluSx SINE Alu -3 309 1 1483 221 66 46 chr2 144506487 144506989 -108749594 - MLT2B1 LTR ERVL 0 520 9 234 271 19 28 chr2 144507139 144507246 -108749337 + L1ME4a LINE L1 5794 5899 -222 358 231 28 70 chr2 144507282 144507335 -108749248 + L1ME4a LINE L1 5985 6039 -82 1651 174 28 0 chr2 144507335 144507622 -108748961 - AluJo SINE Alu -17 295 1 358 231 28 70 chr2 144507622 144507711 -108748872 + L1ME4a LINE L1 6039 6121 0 362 329 82 48 chr2 144508108 144508500 -108748083 + L2 LINE L2 2825 3229 -84 2502 225 37 43 chr2 144508839 144509259 -108747324 + MER21B LTR ERV1 98 514 -349 441 0 0 0 chr2 144509259 144509308 -108747275 + (CA)n Simple_repeat Simple_repeat 1 49 0 2502 225 37 43 chr2 144509308 144509588 -108746995 + MER21B LTR ERV1 514 794 -69 230 167 0 0 chr2 144509941 144509983 -108746600 + MER21B LTR ERV1 248 289 -574 2109 114 10 10 chr2 144510188 144510495 -108746088 + AluSc SINE Alu 1 307 -2 288 262 168 0 chr2 144510551 144510658 -108745925 + MER117 DNA MER1_type 39 163 -34 278 25 0 25 chr2 144511077 144511117 -108745466 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 478 280 129 40 chr2 144512762 144512987 -108743596 - MIR SINE MIR -4 258 14 210 290 20 40 chr2 144513872 144513972 -108742611 + MIR3 SINE MIR 74 171 -37 221 245 0 38 chr2 144514203 144514256 -108742327 + L2 LINE L2 2995 3045 -268 2157 155 136 5 chr2 144514382 144514802 -108741781 - MER61D LTR ERV1 -2 499 25 278 213 0 0 chr2 144514769 144514830 -108741753 - LTR28 LTR ERV1 -959 61 1 * 325 247 35 12 chr2 144514838 144514923 -108741660 + L2 LINE L2 3227 3313 0 198 103 0 0 chr2 144515735 144515764 -108740819 + (CA)n Simple_repeat Simple_repeat 2 30 0 2238 88 7 7 chr2 144515827 144516121 -108740462 + AluSq SINE Alu 3 296 -17 209 369 48 0 chr2 144516803 144516887 -108739696 + MIR SINE MIR 48 135 -73 2105 281 56 77 chr2 144516911 144518243 -108738340 + Charlie2b DNA MER1_type 37 1340 -1442 1084 257 71 62 chr2 144518257 144518919 -108737664 + Charlie2b DNA MER1_type 1544 2218 -644 2114 114 24 0 chr2 144518919 144519209 -108737374 - AluSx SINE Alu -15 297 1 1084 257 71 62 chr2 144519209 144519465 -108737118 + Charlie2b DNA MER1_type 2218 2470 -312 3374 43 2 31 chr2 144519467 144519911 -108736672 + L1PA7 LINE L1 5715 6145 -9 235 284 41 112 chr2 144521874 144521973 -108734610 - L2 LINE L2 -182 3090 3006 2086 137 3 3 chr2 144521973 144522266 -108734317 + AluSc SINE Alu 1 293 -16 235 284 41 112 chr2 144522266 144522335 -108734248 - L2 LINE L2 -266 3006 2934 1810 145 41 26 chr2 144522455 144522733 -108733850 + MER46B DNA MER2_type 1 273 -2458 2242 145 28 14 chr2 144522733 144523092 -108733491 + THE1B LTR MaLR 1 364 0 11205 104 10 3 chr2 144523092 144524661 -108731922 + THE1B-int LTR MaLR 1 1580 0 2116 154 34 17 chr2 144524661 144525019 -108731564 + THE1B LTR MaLR 1 364 0 1810 145 41 26 chr2 144525019 144525037 -108731546 + MER46B DNA MER2_type 273 183 -2548 2352 68 0 0 chr2 144525037 144525315 -108731268 - AluY SINE Alu -10 301 24 1810 145 41 26 chr2 144525315 144525360 -108731223 + MER46B DNA MER2_type 182 225 -11 1090 179 0 35 chr2 144526299 144526500 -108730083 - AluJb SINE Alu -15 297 104 2843 13 0 0 chr2 144526503 144526814 -108729769 - AluYa5 SINE Alu 0 311 1 259 294 108 20 chr2 144526904 144527006 -108729577 + MLT1I LTR MaLR 33 143 -266 23 0 0 0 chr2 144527362 144527385 -108729198 + AT_rich Low_complexity Low_complexity 1 23 0 212 315 0 27 chr2 144528422 144528495 -108728088 - MIR3 SINE MIR -8 200 130 27 73 0 0 chr2 144528957 144529012 -108727571 + AT_rich Low_complexity Low_complexity 1 55 0 695 177 28 0 chr2 144529125 144529266 -108727317 - L1PA16 LINE L1 -1 6165 6021 1042 271 55 39 chr2 144630693 144631419 -108625164 - L1M4 LINE L1 -1971 4175 3438 323 289 86 0 chr2 144631441 144631569 -108625014 - L1M4 LINE L1 -2812 3334 3196 998 237 0 4 chr2 144631570 144631840 -108624743 - L1 LINE L1 -1466 4680 4412 1281 133 0 6 chr2 144632814 144632994 -108623589 + AluSx SINE Alu 1 179 -133 21 0 0 0 chr2 144633113 144633134 -108623449 + AT_rich Low_complexity Low_complexity 1 21 0 581 88 0 0 chr2 144633207 144633287 -108623296 + MADE1 DNA Mariner 1 80 0 473 340 102 48 chr2 144633337 144633669 -108622914 - L2 LINE L2 -4 3268 2919 395 398 54 40 chr2 144633680 144634032 -108622551 - L2 LINE L2 -2 3270 2914 558 0 0 0 chr2 144634038 144634100 -108622483 + (TG)n Simple_repeat Simple_repeat 2 63 0 393 280 34 114 chr2 144634101 144634426 -108622157 - L2 LINE L2 -450 2864 2566 1347 132 5 5 chr2 144634526 144634716 -108621867 - AluSx SINE Alu -122 190 1 867 299 51 38 chr2 144634898 144635350 -108621233 - LTR33 LTR ERVL 0 521 64 2103 141 3 0 chr2 144635351 144635650 -108620933 + AluSx SINE Alu 1 300 -12 2162 109 45 19 chr2 144636261 144636637 -108619946 + L1MA4A LINE L1 5912 6297 -6 1012 163 0 0 chr2 144636669 144636822 -108619761 - AluSg/x SINE Alu -7 305 153 342 175 0 0 chr2 144637073 144637153 -108619430 + (TG)n Simple_repeat Simple_repeat 1 80 0 1721 166 16 39 chr2 144637460 144637767 -108618816 + AluJo SINE Alu 1 300 -12 475 308 0 23 chr2 144638035 144638168 -108618415 + MIR SINE MIR 23 152 -110 1965 119 50 105 chr2 144639072 144639345 -108617238 - L1MA4A LINE L1 0 6303 6066 737 159 8 15 chr2 144639345 144639477 -108617106 - FLAM_C SINE Alu 0 133 3 1965 119 50 105 chr2 144639477 144639680 -108616903 - L1MA4A LINE L1 -237 6066 5853 1017 172 41 0 chr2 144639690 144639859 -108616724 - AluJo SINE Alu -16 296 121 750 186 16 0 chr2 144639860 144639989 -108616594 - AluSg/x SINE Alu -15 297 167 3516 155 30 122 chr2 144640091 144641044 -108615539 + MER21A LTR ERV1 40 905 -26 1424 194 32 51 chr2 144641468 144641782 -108614801 - AluJb SINE Alu 0 312 5 499 332 39 10 chr2 144641882 144642090 -108614493 + L2 LINE L2 3100 3313 0 2044 183 28 65 chr2 144644461 144645031 -108611552 - L1MC3 LINE L1 0 7785 7237 2252 84 3 0 chr2 144646058 144646357 -108610226 - AluSx SINE Alu -12 300 1 204 263 20 0 chr2 144646848 144646905 -108609678 + MIR SINE MIR 92 143 -65 312 333 31 39 chr2 144647077 144647206 -108609377 - L2 LINE L2 -3 3269 3142 288 302 121 9 chr2 144652166 144652282 -108604301 - MIR SINE MIR -57 151 23 2179 135 28 0 chr2 144653013 144653369 -108603214 + MER47A DNA MER2_type 1 366 0 1571 184 11 41 chr2 144653447 144653900 -108602683 - MLT2B1 LTR ERVL -8 507 1 231 303 74 34 chr2 144654330 144654505 -108602078 + MLT1J1 LTR MaLR 74 255 -191 409 253 72 69 chr2 144655732 144656042 -108600541 + MLT1I LTR MaLR 85 549 0 424 343 122 16 chr2 144656042 144656354 -108600229 - LTR33 LTR ERVL -122 399 55 1827 48 136 12 chr2 144658154 144658448 -108598135 + AluY SINE Alu 1 325 0 29 78 0 0 chr2 144658586 144658650 -108597933 + AT_rich Low_complexity Low_complexity 1 64 0 2252 103 7 0 chr2 144658659 144658961 -108597622 + AluSg SINE Alu 1 304 -6 592 270 50 88 chr2 144659198 144659695 -108596888 - MLT1J LTR MaLR -23 488 11 365 291 8 17 chr2 144659723 144659840 -108596743 + GA-rich Low_complexity Low_complexity 4 119 0 363 314 77 8 chr2 144660000 144660261 -108596322 + L1ME4a LINE L1 5561 5839 -282 1470 191 0 80 chr2 144661334 144661658 -108594925 + AluJb SINE Alu 1 298 -14 2045 114 4 0 chr2 144662580 144662896 -108593687 - AluSg SINE Alu 0 317 1 535 291 129 9 chr2 144664202 144664412 -108592171 + MIR SINE MIR 7 241 -21 335 301 53 53 chr2 144664419 144664532 -108592051 + L2 LINE L2 3160 3272 0 754 311 60 17 chr2 144664653 144664955 -108591628 + MLT1I LTR MaLR 90 404 -5 2061 119 0 30 chr2 144665120 144665422 -108591161 - AluSg SINE Alu -17 293 1 1722 164 39 4 chr2 144665426 144665706 -108590877 - AluJo SINE Alu -22 290 1 936 136 35 24 chr2 144667381 144667550 -108589033 - LTR35 LTR ERV1 -30 588 418 2204 153 52 5 chr2 144667550 144667950 -108588633 + MER4B LTR ERV1 1 419 -191 1502 177 88 11 chr2 144668084 144668446 -108588137 + Zaphod DNA AcHobo 3639 4028 -3 1434 218 54 20 chr2 144668711 144669119 -108587464 + MLT1C LTR MaLR 1 422 -45 1857 177 11 14 chr2 144670745 144671107 -108585476 - MLT1A1 LTR MaLR -4 361 1 389 303 105 35 chr2 144671119 144671347 -108585236 - MIR SINE MIR 0 262 19 262 327 46 33 chr2 144672017 144672069 -108584514 - MIR SINE MIR -95 167 117 1376 186 69 11 chr2 144672069 144672343 -108584240 + AluJo SINE Alu 4 293 -19 262 327 46 33 chr2 144672343 144672443 -108584140 - MIR SINE MIR -145 117 13 234 292 0 15 chr2 144672835 144672900 -108583683 + GA-rich Low_complexity Low_complexity 1 64 0 1420 70 15 15 chr2 144673041 144673241 -108583342 + L1PA10 LINE L1 5960 6159 -9 221 367 10 10 chr2 144673732 144673830 -108582753 + L2 LINE L2 2175 2272 -1042 233 237 140 21 chr2 144674109 144674202 -108582381 - MLT1H LTR MaLR -387 162 59 1041 343 38 48 chr2 144674262 144675058 -108581525 + L2 LINE L2 2263 3047 -225 453 241 171 19 chr2 144675324 144675482 -108581101 - LTR33A LTR ERVL -341 182 1 229 344 180 0 chr2 144675520 144675648 -108580935 + L2 LINE L2 3122 3272 0 360 0 0 0 chr2 144675850 144675890 -108580693 + (CA)n Simple_repeat Simple_repeat 1 40 0 2635 229 98 67 chr2 144676628 144677812 -108578771 - MER69B DNA AcHobo 0 1226 6 304 179 26 13 chr2 144678085 144678163 -108578420 + CT-rich Low_complexity Low_complexity 3 81 0 1418 145 9 18 chr2 144678175 144678402 -108578181 - AluSg/x SINE Alu -2 310 86 2077 119 0 7 chr2 144678515 144678818 -108577765 + AluSq SINE Alu 1 301 -12 390 277 116 7 chr2 144678828 144678983 -108577600 - MIR SINE MIR -56 206 35 198 285 164 62 chr2 144679629 144679703 -108576880 + L2 LINE L2 1368 1433 -1881 2958 158 38 116 chr2 144679703 144680499 -108576084 + MER50 LTR ERV1 1 734 0 198 285 164 62 chr2 144680499 144680698 -108575885 + L2 LINE L2 1433 1669 -1645 516 250 60 30 chr2 144680703 144680903 -108575680 - HAL1 LINE L1 0 2507 2302 2445 258 53 28 chr2 144680999 144682723 -108573860 + L1MEc LINE L1 1743 3464 -2751 1873 252 96 61 chr2 144682746 144683326 -108573257 + L1ME LINE L1 986 1544 -4838 264 91 0 0 chr2 144683326 144683370 -108573213 + (CAAAA)n Simple_repeat Simple_repeat 4 47 0 1873 252 96 61 chr2 144683370 144683729 -108572854 + L1ME LINE L1 1544 1889 -4493 2319 76 3 13 chr2 144683729 144684032 -108572551 + AluY SINE Alu 1 300 -11 1873 252 96 61 chr2 144684032 144685328 -108571255 + L1ME LINE L1 1889 3344 -3038 793 270 81 24 chr2 144685707 144685806 -108570777 + L2 LINE L2 2960 3052 -261 2030 154 103 25 chr2 144685806 144686203 -108570380 + MSTA LTR MaLR 1 428 0 793 270 81 24 chr2 144686203 144686436 -108570147 + L2 LINE L2 3052 3311 -2 21 57 0 0 chr2 144686549 144686584 -108569999 + AT_rich Low_complexity Low_complexity 1 35 0 805 241 42 5 chr2 144686650 144686866 -108569717 - MER58A DNA MER1_type 0 224 1 1781 161 0 25 chr2 144686984 144687270 -108569313 - AluJb SINE Alu -33 279 1 271 339 0 8 chr2 144688360 144688481 -108568102 - MLT1L LTR MaLR 0 615 496 2363 145 12 5 chr2 144688589 144688989 -108567594 - MER57A LTR ERV1 0 403 1 633 246 79 35 chr2 144689458 144689686 -108566897 - L1ME LINE L1 -379 5742 5505 754 148 0 0 chr2 144690556 144690678 -108565905 + LTR26E LTR ERV1 1 122 -500 1016 172 0 6 chr2 144690679 144690836 -108565747 + AluJb SINE Alu 1 156 -156 2318 157 60 9 chr2 144690871 144691336 -108565247 + LTR26E LTR ERV1 134 622 0 1431 231 124 20 chr2 144691874 144692022 -108564561 + L1MC4 LINE L1 6443 6574 -1323 1354 5 29 0 chr2 144692022 144692226 -108564357 + (TAGA)n Simple_repeat Simple_repeat 1 210 0 1431 231 124 20 chr2 144692226 144692674 -108563909 + L1MC4 LINE L1 6574 7161 -736 2182 115 0 0 chr2 144692842 144693130 -108563453 - AluSc SINE Alu -16 293 6 342 341 85 11 chr2 144693664 144693840 -108562743 + MIR3 SINE MIR 19 207 -1 1094 317 128 29 chr2 144693841 144694567 -108562016 + L2 LINE L2 2107 2904 -410 682 276 17 0 chr2 144694579 144694760 -108561823 + MLT1J2 LTR MaLR 8 191 -259 1713 162 8 0 chr2 144694940 144695206 -108561377 - AluSx SINE Alu -44 268 1 667 172 83 19 chr2 144695219 144695376 -108561207 - THE1B LTR MaLR -197 167 1 674 127 9 0 chr2 144695378 144695488 -108561095 - LTR35 LTR ERV1 -507 111 1 2559 126 18 2 chr2 144695764 144696161 -108560422 + MER57A LTR ERV1 1 403 0 581 238 40 26 chr2 144696894 144697006 -108559577 - MER5B DNA MER1_type -25 153 37 1665 180 26 4 chr2 144697006 144697278 -108559305 + AluJb SINE Alu 1 278 -34 581 238 40 26 chr2 144697278 144697316 -108559267 - MER5B DNA MER1_type -141 37 1 490 224 58 54 chr2 144698963 144699222 -108557361 - L1ME4a LINE L1 -9 6112 5853 215 361 59 36 chr2 144699241 144699460 -108557123 + L2 LINE L2 2550 2773 -541 443 277 53 53 chr2 144699558 144699684 -108556899 + MER5A DNA MER1_type 1 129 -60 2114 118 3 0 chr2 144699684 144699980 -108556603 - AluSx SINE Alu -15 297 1 443 277 53 53 chr2 144699980 144700041 -108556542 + MER5A DNA MER1_type 128 188 -1 296 321 18 64 chr2 144700076 144700294 -108556289 - MIR SINE MIR -42 220 13 972 259 159 11 chr2 144700462 144700813 -108555770 + LTR16C LTR ERVL 88 490 -1 268 222 0 19 chr2 144701075 144701129 -108555454 - MER96B DNA MER1_type? -175 242 190 630 235 57 57 chr2 144701396 144701626 -108554957 + MER96B DNA MER1_type? 188 417 0 230 326 0 22 chr2 144702041 144702133 -108554450 + MIR SINE MIR 173 262 0 1897 162 44 22 chr2 144702331 144702695 -108553888 - THE1C LTR MaLR -3 372 1 1799 166 7 13 chr2 144702961 144703262 -108553321 - AluJb SINE Alu -13 299 1 2570 257 41 20 chr2 144703722 144704629 -108551954 + L1ME1 LINE L1 4316 5244 -902 2031 163 0 0 chr2 144704629 144704936 -108551647 + AluJb SINE Alu 1 307 -5 2570 257 41 20 chr2 144704936 144704959 -108551624 + L1ME1 LINE L1 5244 5265 -881 2495 206 19 17 chr2 144704970 144705495 -108551088 + MER82 DNA MER2_type 1 526 -127 532 266 0 0 chr2 144705609 144705722 -108550861 + MER82 DNA MER2_type 534 646 -7 723 223 46 15 chr2 144705730 144705927 -108550656 + L1ME1 LINE L1 5281 5483 -683 3147 187 47 21 chr2 144705933 144706829 -108549754 + L1MB5 LINE L1 5184 6157 -17 2045 217 27 65 chr2 144706846 144707446 -108549137 + L1ME1 LINE L1 5474 6050 -116 232 250 13 79 chr2 144707470 144707546 -108549037 - L2 LINE L2 -3 3269 3199 740 298 9 18 chr2 144707583 144707811 -108548772 - MIR SINE MIR -17 245 20 449 236 31 8 chr2 144707811 144707938 -108548645 + L1MA10 LINE L1 6201 6330 -4 2230 105 0 3 chr2 144708230 144708526 -108548057 + AluSg SINE Alu 1 295 -15 497 257 114 6 chr2 144708630 144708805 -108547778 + MER5C DNA MER1_type 31 224 -100 452 307 116 42 chr2 144709020 144709235 -108547348 + MIR SINE MIR 16 246 -16 21 0 0 0 chr2 144709235 144709256 -108547327 + AT_rich Low_complexity Low_complexity 1 21 0 282 321 38 85 chr2 144709459 144709799 -108546784 + L2 LINE L2 2956 3279 -34 381 210 17 76 chr2 144709806 144709925 -108546658 + MER5C DNA MER1_type 213 324 0 182 254 58 123 chr2 144709936 144710074 -108546509 - MIR SINE MIR -113 149 21 241 296 26 26 chr2 144711086 144711201 -108545382 + MER5A DNA MER1_type 7 121 -68 2253 81 0 53 chr2 144711237 144711557 -108545026 - AluY SINE Alu -8 303 1 224 222 333 11 chr2 144711561 144711651 -108544932 - MER5B DNA MER1_type 0 178 60 206 238 0 0 chr2 144711668 144711710 -108544873 + (CA)n Simple_repeat Simple_repeat 2 43 0 2060 168 3 8 chr2 144711780 144712168 -108544415 + L1MB3 LINE L1 5796 6181 -2 661 236 5 51 chr2 144712194 144712410 -108544173 + L2 LINE L2 2938 3143 -170 207 273 0 45 chr2 144713541 144713607 -108542976 + MIR SINE MIR 78 140 -122 693 241 72 51 chr2 144714138 144714375 -108542208 + MIR SINE MIR 2 243 -19 910 308 59 25 chr2 144714611 144715084 -108541499 + L2 LINE L2 2717 3217 -96 2211 110 7 0 chr2 144715084 144715384 -108541199 + AluSq SINE Alu 1 302 -11 910 308 59 25 chr2 144715384 144715485 -108541098 + L2 LINE L2 3217 3313 0 432 0 0 0 chr2 144716184 144716232 -108540351 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 243 0 0 0 chr2 144716728 144716755 -108539828 + (T)n Simple_repeat Simple_repeat 1 27 0 2873 159 22 71 chr2 144717909 144718070 -108538513 - MER44D DNA MER2_type -1883 604 437 1912 84 21 14 chr2 144718070 144718355 -108538228 + L1PA10 LINE L1 5879 6165 -3 2873 159 22 71 chr2 144718355 144718770 -108537813 - MER44D DNA MER2_type -2050 437 1 272 261 0 0 chr2 144718777 144718846 -108537737 - MER116 DNA Mariner -8 72 4 370 322 75 34 chr2 144718926 144719193 -108537390 - L1MC4a LINE L1 -1795 6013 5736 1241 278 55 22 chr2 144719238 144719695 -108536888 - L1MC4a LINE L1 -2083 5725 5254 632 304 104 37 chr2 144719708 144720378 -108536205 - L1MC4a LINE L1 -906 5240 4488 284 305 58 26 chr2 144720492 144720682 -108535901 - L1MC4a LINE L1 -1772 4374 4179 1102 195 166 29 chr2 144721024 144721130 -108535453 - L1MC4 LINE L1 -178 7864 7774 1880 208 141 13 chr2 144721130 144721591 -108534992 - MLT2B1 LTR ERVL 0 520 1 1102 195 166 29 chr2 144721591 144721827 -108534756 - L1MC4 LINE L1 -268 7774 7475 2093 227 48 85 chr2 144721839 144722410 -108534173 - L1M4 LINE L1 -744 5900 5380 879 194 6 6 chr2 144722410 144722585 -108533998 - L1MB5 LINE L1 -9 6165 5991 2093 227 48 85 chr2 144722585 144723001 -108533582 - L1M4 LINE L1 -1264 5380 4950 922 265 70 13 chr2 144722994 144723451 -108533132 - L1M4 LINE L1 -2600 4044 3562 * 302 204 174 31 chr2 144723446 144723544 -108533039 - L1M4 LINE L1 -3384 3260 3149 * 522 0 0 0 chr2 144723825 144723883 -108532700 + (TTTA)n Simple_repeat Simple_repeat 3 60 0 1999 109 0 0 chr2 144723889 144724156 -108532427 - AluSg SINE Alu -43 267 1 192 189 40 0 chr2 144724234 144724308 -108532275 + (TA)n Simple_repeat Simple_repeat 1 77 0 2219 113 0 0 chr2 144724991 144725284 -108531299 + AluSc SINE Alu 4 296 -13 363 286 138 54 chr2 144726780 144727139 -108529444 + L1MC4a LINE L1 5532 5801 -320 571 291 153 25 chr2 144727396 144727599 -108528984 + MIR SINE MIR 8 236 -26 23 0 0 0 chr2 144727637 144727660 -108528923 + AT_rich Low_complexity Low_complexity 1 23 0 241 344 0 0 chr2 144727879 144727943 -108528640 + Zaphod DNA AcHobo 1 64 -3967 1512 202 37 109 chr2 144728005 144728544 -108528039 + Zaphod DNA AcHobo 273 772 -3259 1661 111 30 15 chr2 144728568 144728839 -108527744 - L1MA5A LINE L1 -5 6292 6018 938 233 121 72 chr2 144728847 144729444 -108527139 + Zaphod DNA AcHobo 2411 3036 -995 26732 55 4 1 chr2 144729544 144732937 -108523646 - L1P LINE L1 -2741 3405 1 935 226 86 104 chr2 144732943 144733484 -108523099 - L1M4 LINE L1 -5880 662 133 2460 58 0 19 chr2 144733484 144733793 -108522790 - AluY SINE Alu -8 303 1 935 226 86 104 chr2 144733793 144733902 -108522681 - L1M4 LINE L1 -6409 133 24 240 287 87 33 chr2 144734542 144734698 -108521885 + MIR SINE MIR 20 186 -22 239 296 182 40 chr2 144734730 144734906 -108521677 + MIR SINE MIR 20 220 -42 2071 120 0 0 chr2 144735009 144735320 -108521263 - AluSx SINE Alu 0 311 1 22 106 0 0 chr2 144735670 144735755 -108520828 + AT_rich Low_complexity Low_complexity 1 85 0 180 0 0 0 chr2 144736294 144736314 -108520269 + (T)n Simple_repeat Simple_repeat 1 20 0 459 266 119 0 chr2 144736532 144736675 -108519908 - L1MC/D LINE L1 -2249 5559 5400 297 352 138 6 chr2 144736831 144736990 -108519593 - L3 LINE CR1 -917 660 481 1399 199 57 14 chr2 144737020 144737386 -108519197 - L1M4 LINE L1 -3420 2726 2345 303 28 0 0 chr2 144738868 144738904 -108517679 + (TC)n Simple_repeat Simple_repeat 1 36 0 181 309 24 0 chr2 144742020 144742062 -108514521 - L3b LINE CR1 -17 1566 1524 189 0 0 0 chr2 144742123 144742144 -108514439 + (T)n Simple_repeat Simple_repeat 1 21 0 1033 374 16 58 chr2 144742961 144743408 -108513175 - MSTC LTR MaLR 0 428 1 2438 73 0 0 chr2 144744939 144745239 -108511344 + AluY SINE Alu 1 300 -11 266 305 30 53 chr2 144745239 144745370 -108511213 + MIR3 SINE MIR 40 167 -41 331 164 0 0 chr2 144745710 144745765 -108510818 - MLT1F1 LTR MaLR -6 561 507 2104 133 0 7 chr2 144745941 144746249 -108510334 + AluSx SINE Alu 1 306 -6 21 0 0 0 chr2 144749421 144749442 -108507141 + AT_rich Low_complexity Low_complexity 1 21 0 286 143 0 43 chr2 144749554 144749624 -108506959 + (TATG)n Simple_repeat Simple_repeat 2 68 0 426 170 89 18 chr2 144749632 144749744 -108506839 + L1MD1 LINE L1 6123 6242 0 1015 127 12 18 chr2 144749828 144749993 -108506590 - L1PA16 LINE L1 -53 6113 5950 423 141 0 13 chr2 144749993 144750071 -108506512 + L1PA16 LINE L1 6090 6166 0 2509 213 98 64 chr2 144750071 144750567 -108506016 + L1ME1 LINE L1 4456 4933 -1233 2209 123 3 0 chr2 144750567 144750868 -108505715 + AluSx SINE Alu 1 302 -10 2509 213 98 64 chr2 144750868 144751260 -108505323 + L1ME1 LINE L1 4933 5310 -856 1698 175 10 24 chr2 144751260 144751551 -108505032 + AluJb SINE Alu 1 287 -25 2509 213 98 64 chr2 144751551 144752321 -108504262 + L1ME1 LINE L1 5310 6161 -5 21 57 0 0 chr2 144752650 144752685 -108503898 + AT_rich Low_complexity Low_complexity 1 35 0 2320 84 0 3 chr2 144753800 144754098 -108502485 - AluY SINE Alu -14 297 1 834 345 55 36 chr2 144754423 144754896 -108501687 + L2 LINE L2 2408 2889 -425 869 142 15 0 chr2 144754932 144755066 -108501517 - AluJo SINE Alu -176 136 1 313 321 84 104 chr2 144755128 144755436 -108501147 + L2 LINE L2 2971 3272 0 228 35 0 0 chr2 144755972 144756001 -108500582 + (TTCA)n Simple_repeat Simple_repeat 4 32 0 689 275 131 13 chr2 144756001 144756299 -108500284 - L2 LINE L2 -34 3279 2947 322 283 62 90 chr2 144756329 144756573 -108500010 - MLT1J2 LTR MaLR -4 446 210 663 118 32 31 chr2 144756574 144756720 -108499863 - LTR10A LTR ERV1 0 609 422 254 311 199 39 chr2 144757052 144757586 -108498997 - L2 LINE L2 -553 2761 2143 24 32 0 0 chr2 144760529 144760560 -108496023 + AT_rich Low_complexity Low_complexity 1 31 0 267 114 0 0 chr2 144760994 144761038 -108495545 + (TG)n Simple_repeat Simple_repeat 2 45 0 23 33 0 0 chr2 144761261 144761291 -108495292 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr2 144761894 144761918 -108494665 + AT_rich Low_complexity Low_complexity 1 24 0 207 0 0 0 chr2 144763954 144763977 -108492606 + (A)n Simple_repeat Simple_repeat 1 23 0 1714 70 1 3 chr2 144764995 144765244 -108491339 - L1P LINE L1 -1253 4893 4648 705 169 32 0 chr2 144767385 144767509 -108489074 + MLT2C1 LTR ERVL 1 128 -269 303 244 281 0 chr2 144767868 144768003 -108488580 - MIR SINE MIR -51 211 39 21 36 0 0 chr2 144768265 144768293 -108488290 + AT_rich Low_complexity Low_complexity 1 28 0 1427 214 82 24 chr2 144768494 144768835 -108487748 - MLT1-int LTR MaLR -393 978 618 1277 193 14 45 chr2 144768836 144769126 -108487457 + MLT2C1 LTR ERVL 114 394 -3 1450 141 4 28 chr2 144769216 144769464 -108487119 - Tigger5 DNA MER2_type -1 2322 2081 409 235 0 0 chr2 144769454 144769535 -108487048 - Tigger5 DNA MER2_type -2241 82 2 * 235 312 88 41 chr2 144769630 144769800 -108486783 + L2 LINE L2 3136 3313 0 7467 32 17 0 chr2 144770317 144771962 -108484621 - L1PA5 LINE L1 -1 6153 4495 1868 144 11 4 chr2 144771966 144772244 -108484339 - AluSx SINE Alu -30 282 3 272 286 126 17 chr2 144772649 144772768 -108483815 + L2 LINE L2 3179 3310 -3 265 296 148 42 chr2 144773849 144774254 -108482329 + L2 LINE L2 2359 2806 -508 508 330 102 27 chr2 144774465 144774868 -108481715 - L2 LINE L2 -3 3310 2878 1113 237 43 74 chr2 144775386 144775736 -108480847 + MLT1H1 LTR MaLR 185 523 -32 4574 202 34 36 chr2 144826293 144827611 -108428972 + L1 LINE L1 2177 3491 -2655 438 284 55 22 chr2 144828539 144828722 -108427861 + LTR16A LTR ERVL 257 445 -5 611 291 68 84 chr2 144829882 144830354 -108426229 - L1ME4a LINE L1 -67 6054 5593 1317 198 50 46 chr2 144830354 144830657 -108425926 - AluJo SINE Alu -8 304 1 611 291 68 84 chr2 144830657 144830800 -108425783 - L1ME4a LINE L1 -528 5593 5449 727 270 86 48 chr2 144831067 144831645 -108424938 + MLT1H1 LTR MaLR 1 555 0 1382 140 0 0 chr2 144831752 144831952 -108424631 + AluSx SINE Alu 1 200 -112 221 94 0 0 chr2 144832001 144832033 -108424550 - L2 LINE L2 -2 3270 3239 815 119 0 0 chr2 144832033 144832142 -108424441 + AluSx SINE Alu 186 294 -18 395 322 45 84 chr2 144832386 144832873 -108423710 + MLT1K LTR MaLR 102 569 -19 2045 112 72 0 chr2 144833487 144833763 -108422820 - AluSg SINE Alu -14 296 1 321 93 0 0 chr2 144834416 144834470 -108422113 + (TG)n Simple_repeat Simple_repeat 2 55 0 13131 131 37 33 chr2 144834752 144836501 -108420082 - Tigger1 DNA MER2_type -35 2383 622 4452 63 5 28 chr2 144836501 144837102 -108419481 - LTR14C LTR ERVK 0 587 1 13131 131 37 33 chr2 144837102 144837726 -108418857 - Tigger1 DNA MER2_type -1796 622 2 776 264 94 43 chr2 144837889 144838218 -108418365 + L2 LINE L2 2340 2685 -629 499 251 89 44 chr2 144838235 144838298 -108418285 + L2 LINE L2 3102 3161 -152 297 51 0 0 chr2 144838298 144838337 -108418246 + (TG)n Simple_repeat Simple_repeat 2 40 0 499 251 89 44 chr2 144838337 144838476 -108418107 + L2 LINE L2 3161 3313 0 2411 101 0 0 chr2 144838842 144839150 -108417433 + AluSg SINE Alu 2 309 -1 983 116 0 172 chr2 144839245 144839478 -108417105 - 7SK RNA RNA 0 193 1 200 324 93 0 chr2 144840029 144840137 -108416446 + L2 LINE L2 3178 3295 -18 2077 125 3 0 chr2 144840197 144840505 -108416078 - AluSx SINE Alu 0 312 2 760 153 7 20 chr2 144841038 144841188 -108415395 + L1MB3 LINE L1 6001 6148 -35 1359 140 44 0 chr2 144841188 144841435 -108415148 + L1MA9 LINE L1 6046 6306 -6 253 83 104 0 chr2 144841438 144841486 -108415097 + L1MB4 LINE L1 6127 6179 -1 376 345 10 31 chr2 144843269 144843463 -108413120 - MIR3 SINE MIR -7 201 12 224 333 14 0 chr2 144844596 144844668 -108411915 + MIR SINE MIR 28 100 -162 6317 101 15 0 chr2 144845092 144846123 -108410460 - L1PA10 LINE L1 -1 6167 5132 1556 162 51 92 chr2 144846228 144846641 -108409942 - MER57A LTR ERV1 0 403 8 816 264 5 10 chr2 144846765 144846973 -108409610 - MER58A DNA MER1_type -14 210 4 4214 34 6 0 chr2 144847461 144847934 -108408649 - SVA Other Other -171 1215 740 595 0 0 26 chr2 144847939 144848016 -108408567 + (GGGAGA)n Simple_repeat Simple_repeat 1 75 0 24 39 0 0 chr2 144848369 144848395 -108408188 + GC_rich Low_complexity Low_complexity 1 26 0 1256 35 0 0 chr2 144848478 144848622 -108407961 + SVA Other Other 1243 1386 0 30 27 0 0 chr2 144848953 144848990 -108407593 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr2 144849216 144849244 -108407339 + AT_rich Low_complexity Low_complexity 1 28 0 190 309 0 44 chr2 144850424 144850492 -108406091 + L2 LINE L2 3202 3266 -6 21 57 0 0 chr2 144850899 144850934 -108405649 + AT_rich Low_complexity Low_complexity 1 35 0 550 325 73 7 chr2 144851062 144851446 -108405137 + MLT1K LTR MaLR 138 588 0 1783 93 9 0 chr2 144851783 144852114 -108404469 - L1PA8 LINE L1 -1 6171 5747 826 191 117 32 chr2 144852553 144852670 -108403913 - MER33 DNA MER1_type -2276 309 203 2389 126 28 17 chr2 144852670 144853028 -108403555 - THE1B LTR MaLR -2 362 1 826 191 117 32 chr2 144853028 144853193 -108403390 - MER33 DNA MER1_type -2382 203 3 674 310 90 21 chr2 144853412 144853880 -108402703 - LTR33 LTR ERVL -21 500 1 304 256 6 98 chr2 144854309 144854473 -108402110 - LTR16A1 LTR ERVL -55 402 254 380 285 135 19 chr2 144855144 144855351 -108401232 - MIR SINE MIR -1 261 31 233 273 107 87 chr2 144855587 144855737 -108400846 + MLT1K LTR MaLR 217 369 -219 409 325 102 60 chr2 144856635 144857048 -108399535 + L3 LINE CR1 1058 1487 -90 251 254 140 9 chr2 144857054 144857168 -108399415 + MLT1J LTR MaLR 1 129 -382 244 220 83 37 chr2 144857230 144857339 -108399244 + MLT1J LTR MaLR 224 337 -174 778 313 122 18 chr2 144858653 144859104 -108397479 - MLT2F LTR ERVL -165 498 1 406 326 118 34 chr2 144860969 144861383 -108395200 + LTR33 LTR ERVL 73 521 0 1414 199 64 25 chr2 144861460 144861742 -108394841 - AluJo SINE Alu -15 297 5 273 240 156 21 chr2 144862048 144862144 -108394439 - L2 LINE L2 -15 3257 3149 240 35 0 0 chr2 144862214 144862243 -108394340 + (TC)n Simple_repeat Simple_repeat 1 29 0 1684 192 55 0 chr2 144862266 144862609 -108393974 + MLT1A1 LTR MaLR 4 365 0 1615 291 28 31 chr2 144862637 144863242 -108393341 - MLT2F LTR ERVL -58 605 3 1871 79 106 8 chr2 144863562 144863827 -108392756 - AluY SINE Alu -20 291 1 211 394 0 0 chr2 144864206 144864277 -108392306 + MIR SINE MIR 42 112 -96 357 224 13 0 chr2 144864615 144864691 -108391892 - MIR SINE MIR -67 195 119 15175 96 7 1 chr2 144864940 144866610 -108389973 + L1PA7 LINE L1 3013 4726 -1428 2220 123 7 10 chr2 144866610 144866919 -108389664 + AluSq SINE Alu 1 308 -5 15175 96 7 1 chr2 144866919 144868355 -108388228 + L1PA7 LINE L1 4726 6152 -2 22 35 0 0 chr2 144868777 144868806 -108387777 + AT_rich Low_complexity Low_complexity 1 29 0 526 293 92 0 chr2 144869097 144869261 -108387322 - MIR SINE MIR -66 196 18 281 333 52 0 chr2 144869721 144869817 -108386766 + L2 LINE L2 3204 3304 -9 527 315 219 10 chr2 144871201 144871585 -108384998 - L2 LINE L2 -21 3292 2829 765 225 38 34 chr2 144872837 144873073 -108383510 - L1ME2 LINE L1 -9 6950 6714 26 0 0 0 chr2 144874266 144874292 -108382291 + AT_rich Low_complexity Low_complexity 1 26 0 311 269 19 29 chr2 144874917 144875021 -108381562 - L1ME2 LINE L1 -234 6727 6625 279 0 0 0 chr2 144875030 144875061 -108381522 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1541 267 100 39 chr2 144875068 144876672 -108379911 - L1ME2 LINE L1 -394 6567 4869 201 167 146 0 chr2 144876875 144876923 -108379660 + MIR SINE MIR 133 187 -75 1817 256 156 33 chr2 144878813 144880443 -108376140 - L1ME2 LINE L1 -2043 4898 3068 243 182 0 0 chr2 144880456 144880500 -108376083 - L3 LINE CR1 -892 685 642 1770 173 0 47 chr2 144880502 144880820 -108375763 + AluSx SINE Alu 1 303 -9 985 316 121 22 chr2 144880983 144881527 -108375056 - L1ME2 LINE L1 -4564 2558 1961 232 286 116 0 chr2 144881626 144881773 -108374810 - L1ME2 LINE L1 -5192 1751 1588 264 268 45 40 chr2 144881826 144882024 -108374559 - L1ME2 LINE L1 -4951 1472 1274 225 214 0 0 chr2 144882309 144882351 -108374232 - Tigger3(Golem) DNA MER2_type 0 3038 2997 2940 143 52 19 chr2 144883016 144883610 -108372973 - L1MA8 LINE L1 -20 6271 5658 319 304 20 29 chr2 144885225 144885327 -108371256 + MIR SINE MIR 1 101 -161 306 0 0 0 chr2 144885875 144885909 -108370674 + (TG)n Simple_repeat Simple_repeat 2 35 0 196 179 26 0 chr2 144886737 144886776 -108369807 + MER5B DNA MER1_type 4 43 -135 186 364 88 65 chr2 144886884 144887282 -108369301 - L2 LINE L2 -41 3231 2825 2181 128 22 30 chr2 144887646 144888013 -108368570 - THE1B LTR MaLR 0 364 1 5400 93 17 0 chr2 144888013 144888768 -108367815 - THE1B-int LTR MaLR 0 1580 813 1011 151 32 64 chr2 144888777 144888832 -108367751 - THE1B LTR MaLR -152 212 157 2824 56 14 0 chr2 144888832 144889227 -108367356 + L1PA7 LINE L1 5774 6173 0 1011 151 32 64 chr2 144889227 144889388 -108367195 - THE1B LTR MaLR -207 157 1 186 276 103 0 chr2 144890047 144890105 -108366478 + MER5A DNA MER1_type 53 116 -73 774 351 91 31 chr2 144890293 144891030 -108365553 + L2 LINE L2 2539 3310 -3 834 95 0 0 chr2 144893313 144893429 -108363154 + L1PA10 LINE L1 6042 6157 -11 2160 50 3 61 chr2 144893462 144893804 -108362779 + AluY SINE Alu 1 325 0 585 321 46 8 chr2 144894146 144894386 -108362197 + MIR SINE MIR 11 259 -3 1205 193 9 0 chr2 144894665 144894883 -108361700 - MER58A DNA MER1_type -3 221 2 529 347 96 42 chr2 144896211 144896637 -108359946 + L2 LINE L2 2819 3267 -5 1665 226 40 55 chr2 144896712 144897262 -108359321 + MER34 LTR ERV1 1 542 0 490 232 196 61 chr2 144897595 144897799 -108358784 - MER102a DNA MER1_type -1099 318 64 2140 80 3 33 chr2 144897799 144898099 -108358484 - AluSc SINE Alu -17 292 2 490 232 196 61 chr2 144898099 144898174 -108358409 - MER102a DNA MER1_type -1353 64 1 292 315 36 42 chr2 144898289 144898454 -108358129 - MIR3 SINE MIR -5 203 40 291 54 0 0 chr2 144898490 144898527 -108358056 + (TG)n Simple_repeat Simple_repeat 1 37 0 371 252 223 0 chr2 144898588 144898727 -108357856 - MER5A DNA MER1_type -9 180 11 29 0 0 0 chr2 144899463 144899492 -108357091 + AT_rich Low_complexity Low_complexity 1 29 0 317 298 61 18 chr2 144899913 144900027 -108356556 + MIR3 SINE MIR 83 201 -7 234 337 12 0 chr2 144900479 144900579 -108356004 + CT-rich Low_complexity Low_complexity 1 101 0 1581 195 32 32 chr2 144900772 144901111 -108355472 - MER44D DNA MER2_type 0 609 1 221 224 0 0 chr2 144902560 144902609 -108353974 - L2 LINE L2 -1 3312 3264 231 173 0 0 chr2 144903025 144903077 -108353506 + (CAAA)n Simple_repeat Simple_repeat 1 52 0 184 282 204 19 chr2 144903103 144903206 -108353377 + L3b LINE CR1 1444 1565 -18 212 149 0 43 chr2 144903839 144903886 -108352697 + (TATAA)n Simple_repeat Simple_repeat 4 48 0 330 138 0 0 chr2 144905157 144905215 -108351368 + (TTCC)n Simple_repeat Simple_repeat 2 59 0 1911 161 128 13 chr2 144906538 144906922 -108349661 - MSTA LTR MaLR 0 428 1 7567 109 15 8 chr2 144907225 144908339 -108348244 + L1PA8A LINE L1 1 1122 -4753 14410 122 13 6 chr2 144908343 144910730 -108345853 + L1PA8A LINE L1 3343 5746 -700 1045 155 79 35 chr2 144912578 144912895 -108343688 - Charlie1a DNA MER1_type 0 1455 1125 35725 102 9 12 chr2 144912895 144915345 -108341238 - L1PA6 LINE L1 -3 6151 3695 333 0 0 0 chr2 144915345 144915382 -108341201 + (TG)n Simple_repeat Simple_repeat 2 38 0 35725 102 9 12 chr2 144915382 144919091 -108337492 - L1PA6 LINE L1 -2459 3695 11 3788 209 83 57 chr2 144919102 144920195 -108336388 - Charlie1a DNA MER1_type -324 1131 10 1649 173 42 7 chr2 144922241 144922530 -108334053 + AluJo SINE Alu 1 299 -13 192 250 131 24 chr2 144923677 144923761 -108332822 - MIR SINE MIR -31 231 139 182 359 47 0 chr2 144924965 144925029 -108331554 - MIR SINE MIR -111 151 85 222 331 66 66 chr2 144926271 144926407 -108330176 + L2 LINE L2 3137 3272 0 210 354 12 75 chr2 144926760 144926921 -108329662 + L2 LINE L2 3116 3266 -6 1124 171 40 11 chr2 144927338 144927662 -108328921 + MSTD LTR MaLR 1 396 0 226 115 39 0 chr2 144927936 144927988 -108328595 + CT-rich Low_complexity Low_complexity 1 54 0 467 267 53 13 chr2 144928088 144928238 -108328345 - MIR3 SINE MIR -37 171 16 628 227 41 41 chr2 144928389 144928561 -108328022 + MIR SINE MIR 91 262 0 1919 145 14 90 chr2 144929756 144930177 -108326406 - MLT1B LTR MaLR -1 389 1 1896 209 44 15 chr2 144930178 144930585 -108325998 - MLT1B-int LTR MaLR -1 1370 952 336 167 0 0 chr2 144931042 144931102 -108325481 - MLT1B-int LTR MaLR -487 884 825 * 2264 184 24 30 chr2 144931092 144931698 -108324885 - MLT1B-int LTR MaLR -660 711 1 1847 184 34 21 chr2 144931698 144932083 -108324500 - MLT1B LTR MaLR 0 390 1 1971 203 19 30 chr2 144932531 144933003 -108323580 - MLT1C LTR MaLR 0 467 1 766 309 125 11 chr2 144933471 144933830 -108322753 + MLT1J LTR MaLR 2 401 -110 560 297 115 57 chr2 144933917 144934335 -108322248 + L2 LINE L2 2872 3313 0 2246 73 0 24 chr2 144934382 144934698 -108321885 - AluY SINE Alu 0 309 1 438 299 55 25 chr2 144935106 144935307 -108321276 + MIR SINE MIR 8 214 -48 327 298 37 83 chr2 144935393 144935611 -108320972 - L1ME3A LINE L1 0 6170 5963 918 260 101 36 chr2 144935663 144936101 -108320482 - L1ME3A LINE L1 -203 5967 5502 683 131 0 19 chr2 144936880 144936987 -108319596 - AluJo/FRAM SINE Alu -24 288 184 347 189 0 0 chr2 144936988 144937064 -108319519 - FLAM_A SINE Alu 0 133 67 4130 154 28 4 chr2 144937070 144937758 -108318825 - MER50 LTR ERV1 -30 704 1 344 122 0 0 chr2 144937760 144937809 -108318774 - FRAM/FAM SINE Alu -98 68 20 404 305 62 11 chr2 144937975 144938152 -108318431 - MIR SINE MIR 0 262 77 196 417 0 0 chr2 144938429 144938489 -108318094 + L2 LINE L2 3121 3180 -92 2176 122 72 48 chr2 144939015 144939164 -108317419 + MSTA LTR MaLR 1 145 -283 2011 110 0 42 chr2 144939164 144939473 -108317110 - AluSx SINE Alu -15 297 2 2176 122 72 48 chr2 144939473 144939741 -108316842 + MSTA LTR MaLR 145 428 0 668 127 104 29 chr2 144939783 144939956 -108316627 + MER53 DNA DNA 1 186 -3 21 0 0 0 chr2 144940386 144940407 -108316176 + AT_rich Low_complexity Low_complexity 1 21 0 668 288 98 56 chr2 144940598 144941046 -108315537 - MLT1H LTR MaLR 0 549 83 209 317 50 0 chr2 144941228 144941288 -108315295 + MIR3 SINE MIR 100 162 -46 1791 122 56 0 chr2 144941484 144941770 -108314813 - L1PA15 LINE L1 -3 6162 5861 1753 151 42 68 chr2 144942264 144942647 -108313936 - THE1C LTR MaLR -2 373 1 788 178 89 13 chr2 144943015 144943172 -108313411 + MER2 DNA MER2_type 2 170 -175 814 192 27 0 chr2 144943174 144943320 -108313263 + FRAM SINE Alu 2 151 -25 896 195 58 0 chr2 144943331 144943505 -108313078 + MER2 DNA MER2_type 161 344 -1 2148 122 0 0 chr2 144943889 144944184 -108312399 - AluSg1 SINE Alu -13 296 2 764 160 8 0 chr2 144944712 144944837 -108311746 - FLAM_C SINE Alu -11 132 7 323 336 27 60 chr2 144945016 144945165 -108311418 - MIR SINE MIR -79 183 40 280 234 22 49 chr2 144945233 144945505 -108311078 + (TTATA)n Simple_repeat Simple_repeat 1 264 0 3889 220 80 4 chr2 144945541 144947343 -108309240 - L1MB4 LINE L1 -79 6101 4165 195 162 0 0 chr2 144947493 144947530 -108309053 + (CA)n Simple_repeat Simple_repeat 2 38 0 23 78 0 0 chr2 144947566 144947617 -108308966 + AT_rich Low_complexity Low_complexity 1 51 0 36 53 0 0 chr2 144947696 144947753 -108308830 + AT_rich Low_complexity Low_complexity 1 57 0 251 229 98 0 chr2 144948675 144948736 -108307847 + Harlequin LTR ERV1 3730 3796 -3100 23 20 8 0 chr2 144949082 144949154 -108307429 + AT_rich Low_complexity Low_complexity 1 30 0 879 275 111 49 chr2 144949242 144949752 -108306831 + MLT1G1 LTR MaLR 1 595 0 1875 187 86 10 chr2 144950002 144950398 -108306185 - MSTB LTR MaLR 0 426 1 275 320 68 26 chr2 144951284 144951971 -108304612 + L1MEc LINE L1 1103 1818 -4578 498 204 41 0 chr2 144952155 144952253 -108304330 - Tigger7 DNA MER2_type -446 104 3 1946 130 0 14 chr2 144952433 144952766 -108303817 - AluSc SINE Alu 0 329 1 1181 191 43 62 chr2 144952827 144953222 -108303361 + MLT1C LTR MaLR 1 364 -26 2776 178 22 17 chr2 144953226 144953828 -108302755 + L1 LINE L1 3952 4556 -1590 1451 218 13 13 chr2 144954061 144954359 -108302224 - AluJo SINE Alu -14 298 1 654 210 0 22 chr2 144955821 144955959 -108300624 + AluJb SINE Alu 171 305 -7 2310 51 0 4 chr2 144956704 144956977 -108299606 - AluY SINE Alu -9 302 31 1032 286 15 4 chr2 144957168 144957427 -108299156 - LTR33 LTR ERVL -259 262 1 23 0 0 0 chr2 144958621 144958644 -108297939 + AT_rich Low_complexity Low_complexity 1 23 0 321 232 62 45 chr2 144958704 144958816 -108297767 - MER103 DNA DNA -49 117 4 2536 45 7 7 chr2 144959363 144959672 -108296911 + AluY SINE Alu 1 309 -2 2786 223 11 26 chr2 144960098 144960792 -108295791 - L1MA10 LINE L1 -1 6333 5650 1196 77 6 0 chr2 144960909 144961078 -108295505 + (TTCC)n Simple_repeat Simple_repeat 3 172 0 878 206 0 0 chr2 144961078 144961224 -108295359 - FRAM SINE Alu -25 151 6 333 0 0 0 chr2 144961240 144961267 -108295316 + (CA)n Simple_repeat Simple_repeat 1 64 0 333 0 0 0 chr2 144961267 144961304 -108295279 + (CA)n Simple_repeat Simple_repeat 2 38 0 682 216 11 11 chr2 144961406 144961552 -108295031 - L1M3c LINE L1 -4528 1613 1465 632 189 0 25 chr2 144961552 144961674 -108294909 - FLAM_C SINE Alu -14 119 1 682 216 11 11 chr2 144961674 144961712 -108294871 - L1M3c LINE L1 -4675 1466 1429 2146 286 31 21 chr2 144961782 144962625 -108293958 - L1M4c LINE L1 -4565 1819 969 * 4522 144 20 17 chr2 144962612 144963274 -108293309 - L1PA15 LINE L1 0 6165 5506 393 22 0 0 chr2 144963274 144963320 -108293263 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 2042 133 0 0 chr2 144963320 144963605 -108292978 - AluSx SINE Alu -27 285 1 4522 144 20 17 chr2 144963605 144963702 -108292881 - L1PA15 LINE L1 -658 5507 5403 1968 290 73 65 chr2 144963704 144964914 -108291669 - L1M3c LINE L1 -4920 1221 3 1326 219 104 25 chr2 144965153 144965555 -108291028 + MER63B DNA MER1_type 1 434 -2 1239 178 39 4 chr2 144965684 144965914 -108290669 - Tigger2a DNA MER2_type 0 444 207 558 130 0 0 chr2 144965914 144966006 -108290577 + L1MA3 LINE L1 6214 6305 0 1144 84 7 0 chr2 144966022 144966177 -108290406 + MER41A LTR ERV1 399 554 0 5947 118 51 10 chr2 144966180 144967065 -108289518 + MER41A-int LTR ERV1 4 924 -5022 2250 131 49 16 chr2 144967062 144967564 -108289019 + MER41A-int LTR ERV1 1395 2017 -3929 * 1798 161 6 12 chr2 144967593 144967916 -108288667 - THE1C LTR MaLR 0 375 55 817 84 0 142 chr2 144967927 144968082 -108288501 + MER41A-int LTR ERV1 2472 2604 -3342 4179 119 21 18 chr2 144968087 144968761 -108287822 + L1PA14 LINE L1 5484 6159 -2 1059 149 14 42 chr2 144968767 144968982 -108287601 - Tigger2a DNA MER2_type -225 209 1 341 339 23 92 chr2 144969688 144969862 -108286721 + L2 LINE L2 3111 3272 0 515 267 30 0 chr2 144969950 144970085 -108286498 + MIR SINE MIR 124 262 0 23 0 0 0 chr2 144970812 144970835 -108285748 + AT_rich Low_complexity Low_complexity 1 23 0 359 89 0 18 chr2 144972531 144972587 -108283996 - MLT2A1 LTR ERVL 0 444 390 419 184 0 10 chr2 144972587 144972685 -108283898 + (TA)n Simple_repeat Simple_repeat 1 97 0 2780 92 20 10 chr2 144972685 144973085 -108283498 - MLT2A1 LTR ERVL -40 404 1 360 322 25 8 chr2 144973230 144973351 -108283232 + MIR3 SINE MIR 83 205 -3 258 322 38 38 chr2 144973596 144973779 -108282804 - MLT1K LTR MaLR -7 581 399 327 408 73 5 chr2 144973932 144974150 -108282433 - MLT1K LTR MaLR -342 246 14 213 294 0 73 chr2 144974176 144974244 -108282339 - L2 LINE L2 -10 3262 3200 188 350 131 11 chr2 144974913 144975096 -108281487 - L2 LINE L2 -492 2822 2618 201 339 75 54 chr2 144975380 144975937 -108280646 - L2 LINE L2 -1194 2120 1552 434 323 85 46 chr2 144977035 144977363 -108279220 + MER102b DNA MER1_type 1 341 0 440 250 70 0 chr2 144978251 144978351 -108278232 + MER81 DNA DNA 7 113 -1 476 296 170 9 chr2 144979608 144979831 -108276752 + MIR SINE MIR 4 262 0 228 372 0 0 chr2 144980575 144980653 -108275930 - L2 LINE L2 0 3313 3236 326 288 15 61 chr2 144981193 144981325 -108275258 + MER117 DNA MER1_type 11 136 -61 7506 143 12 43 chr2 144981559 144981912 -108274671 + HSMAR2 DNA Mariner 10 372 -930 1992 83 63 40 chr2 144981912 144982212 -108274371 - AluSq SINE Alu -6 307 1 7506 143 12 43 chr2 144982212 144983191 -108273392 + HSMAR2 DNA Mariner 372 1301 -1 208 231 0 0 chr2 144983196 144983235 -108273348 + (TG)n Simple_repeat Simple_repeat 1 39 0 204 333 11 11 chr2 144985187 144985280 -108271303 + (TATATG)n Simple_repeat Simple_repeat 1 93 0 256 200 67 0 chr2 144986127 144986187 -108270396 - L1MA9 LINE L1 -93 6219 6156 788 30 30 0 chr2 144986248 144986349 -108270234 - L1PA7 LINE L1 0 6154 6051 5779 61 14 0 chr2 144986349 144987084 -108269499 + L1PA7 LINE L1 5319 6063 -91 3744 202 22 10 chr2 144987084 144988208 -108268375 - L1MA9 LINE L1 -206 6106 4969 * 16542 201 43 21 chr2 144988205 144989784 -108266799 - L1PA13 LINE L1 -776 6021 4479 1452 220 40 0 chr2 144989784 144990080 -108266503 - AluJb SINE Alu -4 308 1 16542 201 43 21 chr2 144990080 144992387 -108264196 - L1PA13 LINE L1 -2318 4479 1911 1647 193 0 3 chr2 144992387 144992703 -108263880 + AluSx SINE Alu 1 315 0 16542 201 43 21 chr2 144992703 144994657 -108261926 - L1PA13 LINE L1 -4886 1911 2 2074 217 31 86 chr2 144994672 144995875 -108260708 - L1M4 LINE L1 -3101 3543 2420 1250 322 62 39 chr2 144995909 144996713 -108259870 - L1M4 LINE L1 -5718 824 2 448 277 17 82 chr2 144997453 144997684 -108258899 + HERVL LTR ERVL 471 686 -5078 857 345 31 19 chr2 144998088 144998511 -108258072 + HERVL LTR ERVL 3088 3515 -2139 2880 303 27 14 chr2 144998639 145000144 -108256439 + HERVL LTR ERVL 3892 5478 -286 582 263 39 0 chr2 145000435 145000591 -108255992 + LTR41 LTR ERVL 3 164 -609 371 187 29 73 chr2 145000957 145001127 -108255456 + LTR50 LTR ERVL 628 795 0 202 326 179 11 chr2 145001756 145001851 -108254732 - MIR SINE MIR -131 131 21 2291 274 0 60 chr2 145002269 145002816 -108253767 - L1MA5 LINE L1 -2 6298 5785 1892 216 17 0 chr2 145002814 145003236 -108253347 - L1 LINE L1 -2148 5019 4591 * 260 27 27 0 chr2 145003244 145003281 -108253302 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 5346 8 5 3 chr2 145003281 145003886 -108252697 - L1HS LINE L1 -14 6141 5533 5016 203 24 9 chr2 145003890 145004196 -108252387 - L1M2a LINE L1 -2481 4686 4386 2293 176 21 5 chr2 145004196 145004622 -108251961 + Tigger2a DNA MER2_type 1 433 -1 5016 203 24 9 chr2 145004622 145005779 -108250804 - L1M2a LINE L1 -2781 4386 3208 * 5541 229 9 5 chr2 145005777 145006883 -108249700 - L1M2a LINE L1 -5370 1798 689 699 270 5 25 chr2 145006886 145007082 -108249501 - L1M2a LINE L1 -6335 833 642 395 288 90 65 chr2 145007080 145007358 -108249225 - L1M2a LINE L1 -6280 888 604 * 24 32 0 0 chr2 145007750 145007781 -108248802 + AT_rich Low_complexity Low_complexity 1 31 0 238 268 0 0 chr2 145007807 145007863 -108248720 - L2 LINE L2 -2 3311 3256 194 119 48 0 chr2 145007979 145008021 -108248562 + (TATG)n Simple_repeat Simple_repeat 1 44 0 229 351 45 0 chr2 145008048 145008182 -108248401 - L1MC/D LINE L1 -2264 5544 5405 283 229 179 36 chr2 145008845 145009124 -108247459 - L1MDa LINE L1 -4712 1828 1510 205 178 0 0 chr2 145009740 145009785 -108246798 + T-rich Low_complexity Low_complexity 1 45 0 27 29 0 0 chr2 145009897 145009931 -108246652 + AT_rich Low_complexity Low_complexity 1 34 0 773 197 5 103 chr2 145010924 145011127 -108245456 + AluJo SINE Alu 4 186 -126 29 0 0 0 chr2 145011812 145011841 -108244742 + AT_rich Low_complexity Low_complexity 1 29 0 331 316 109 43 chr2 145011862 145012210 -108244373 - HAL1 LINE L1 -742 1765 1395 21 57 0 0 chr2 145013728 145013763 -108242820 + AT_rich Low_complexity Low_complexity 1 35 0 342 284 98 57 chr2 145014147 145014341 -108242242 - MLT1L LTR MaLR -409 206 5 1877 179 0 3 chr2 145015922 145016229 -108240354 + AluJb SINE Alu 1 306 -6 33 0 0 0 chr2 145016335 145016368 -108240215 + AT_rich Low_complexity Low_complexity 1 33 0 199 240 40 20 chr2 145016488 145016538 -108240045 - MER5A DNA MER1_type -83 106 56 304 214 0 0 chr2 145016662 145016718 -108239865 + MLT-int LTR MaLR 686 741 -994 2183 240 16 24 chr2 145016807 145017298 -108239285 + MLT1A2-int LTR MaLR 1248 1734 -1 1345 209 43 51 chr2 145017302 145017676 -108238907 + MLT1A2 LTR MaLR 4 374 0 404 281 47 117 chr2 145018510 145018955 -108237628 + MLT1G1-int LTR MaLR 956 1369 -2 544 245 80 13 chr2 145018961 145019098 -108237485 + MLT1G1 LTR MaLR 6 152 -443 1825 139 17 7 chr2 145019098 145019400 -108237183 + THE1A LTR MaLR 1 305 -50 1243 272 83 60 chr2 145020069 145020632 -108235951 + L1MCb LINE L1 1 576 -5469 4209 217 98 55 chr2 145020710 145021703 -108234880 + L1MCb LINE L1 570 1518 -5046 315 0 0 0 chr2 145021703 145021738 -108234845 + (CA)n Simple_repeat Simple_repeat 2 36 0 4209 217 98 55 chr2 145021738 145022627 -108233956 + L1MCb LINE L1 1518 2595 -3969 652 240 134 11 chr2 145022644 145022823 -108233760 - MLT1A2 LTR MaLR 0 374 174 947 290 21 12 chr2 145022906 145023244 -108233339 + L1MCb LINE L1 2862 3202 -3362 335 126 34 0 chr2 145023244 145023313 -108233270 + L1MB5 LINE L1 5862 5908 -266 325 306 75 41 chr2 145023622 145024158 -108232425 - L1MEd LINE L1 -2955 3174 2621 278 274 35 93 chr2 145024484 145024710 -108231873 - HAL1 LINE L1 -932 1575 1363 340 363 29 29 chr2 145024767 145024971 -108231612 - L1MEd LINE L1 -4875 1244 1041 202 310 0 0 chr2 145025532 145025590 -108230993 - L2 LINE L2 -350 2922 2865 429 255 28 0 chr2 145025696 145025802 -108230781 - MER81 DNA DNA -3 111 3 226 310 14 0 chr2 145028779 145028850 -108227733 - L2 LINE L2 -5 3308 3237 207 0 0 0 chr2 145028956 145028979 -108227604 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 274 295 143 19 chr2 145029525 145029630 -108226953 + L2 LINE L2 3185 3302 -11 24 0 0 0 chr2 145030421 145030445 -108226138 + AT_rich Low_complexity Low_complexity 1 24 0 709 229 88 99 chr2 145031108 145031176 -108225407 + MLT1A1 LTR MaLR 1 68 -297 2111 138 0 0 chr2 145031176 145031488 -108225095 - AluSx SINE Alu 0 312 1 709 229 88 99 chr2 145031488 145031851 -108224732 + MLT1A1 LTR MaLR 68 364 -1 244 229 0 0 chr2 145032628 145032676 -108223907 - MLT1K LTR MaLR -346 242 195 290 267 71 115 chr2 145032997 145033573 -108223010 - L1MEd LINE L1 -4911 1208 658 36 0 0 0 chr2 145034079 145034115 -108222468 + AT_rich Low_complexity Low_complexity 1 36 0 437 288 62 34 chr2 145034171 145034317 -108222266 - MIR SINE MIR -98 164 15 643 273 91 13 chr2 145034488 145034719 -108221864 + MIR SINE MIR 14 262 0 380 262 79 67 chr2 145036093 145036257 -108220326 - MER69A DNA AcHobo -2 175 10 190 299 119 0 chr2 145036263 145036330 -108220253 - L2 LINE L2 -20 3252 3178 1971 127 68 0 chr2 145036564 145036856 -108219727 - AluSx SINE Alu 0 312 1 2753 237 75 29 chr2 145037075 145037831 -108218752 - MER21B LTR ERV1 -57 806 16 368 256 0 13 chr2 145037850 145037928 -108218655 - MER21B LTR ERV1 -774 89 13 308 283 72 22 chr2 145039806 145039944 -108216639 - HAL1b LINE L1 -13 1335 1191 339 306 58 35 chr2 145040140 145040477 -108216106 - L1MC4a LINE L1 -383 5781 5607 24 0 0 0 chr2 145041341 145041365 -108215218 + AT_rich Low_complexity Low_complexity 1 24 0 305 333 14 35 chr2 145041728 145041869 -108214714 - MIR3 SINE MIR 0 208 71 725 310 5 5 chr2 145042096 145042299 -108214284 + MIR SINE MIR 39 241 -21 330 26 0 0 chr2 145042434 145042473 -108214110 + (CA)n Simple_repeat Simple_repeat 2 40 0 231 305 59 17 chr2 145042570 145042688 -108213895 + L2 LINE L2 3191 3313 0 271 372 51 22 chr2 145042711 145042848 -108213735 - L2 LINE L2 -568 2746 2606 186 167 0 104 chr2 145043538 145043586 -108212997 + L2 LINE L2 3262 3304 -9 22 0 0 0 chr2 145044721 145044743 -108211840 + AT_rich Low_complexity Low_complexity 1 22 0 225 0 0 0 chr2 145044790 145044815 -108211768 + (TA)n Simple_repeat Simple_repeat 2 26 0 666 281 8 34 chr2 145046143 145046378 -108210205 - L2 LINE L2 0 3313 3085 21 57 0 0 chr2 145046598 145046633 -108209950 + AT_rich Low_complexity Low_complexity 1 35 0 1202 202 20 10 chr2 145046647 145046939 -108209644 + MER33 DNA MER1_type 30 324 0 472 213 0 46 chr2 145046963 145047071 -108209512 - MER58B DNA MER1_type 0 341 239 421 266 35 109 chr2 145047207 145047436 -108209147 + MIR SINE MIR 48 259 -3 282 56 0 0 chr2 145047462 145047498 -108209085 + (CA)n Simple_repeat Simple_repeat 2 37 0 1544 202 0 26 chr2 145048631 145048943 -108207640 + AluJb SINE Alu 6 309 -3 295 266 32 0 chr2 145048946 145049040 -108207543 - MER53 DNA DNA -62 127 31 271 247 56 0 chr2 145048970 145049059 -108207524 + MER53 DNA DNA 95 188 -1 * 236 352 0 14 chr2 145049269 145049340 -108207243 + MIR SINE MIR 62 131 -77 198 302 119 24 chr2 145049408 145049534 -108207049 - MIR SINE MIR -78 184 47 851 237 61 0 chr2 145050101 145050299 -108206284 + MIR SINE MIR 34 243 -19 351 323 8 44 chr2 145050381 145050556 -108206027 - MIR SINE MIR -57 151 2 547 228 38 16 chr2 145050699 145050883 -108205700 - MER53 DNA DNA -1 188 1 22 0 0 0 chr2 145051056 145051078 -108205505 + AT_rich Low_complexity Low_complexity 1 22 0 261 252 58 65 chr2 145051078 145051217 -108205366 - MIR SINE MIR 0 262 125 587 264 134 20 chr2 145051229 145051528 -108205055 - MLT1I LTR MaLR -63 346 14 372 229 184 0 chr2 145051541 145051650 -108204933 - MIR SINE MIR -131 131 3 774 243 18 0 chr2 145053030 145053199 -108203384 - MER5B DNA MER1_type 0 178 7 220 263 71 20 chr2 145053417 145053516 -108203067 - MIR SINE MIR -78 184 81 27 73 0 0 chr2 145054421 145054476 -108202107 + AT_rich Low_complexity Low_complexity 1 55 0 2229 190 20 66 chr2 145055391 145055934 -108200649 - MLT2B1 LTR ERVL 0 520 3 253 256 41 41 chr2 145056060 145056181 -108200402 - MARNA DNA Mariner -205 381 261 922 68 0 0 chr2 145056229 145056401 -108200182 + AluY SINE Alu 163 282 -29 265 335 32 19 chr2 145056404 145056562 -108200021 - MARNA DNA Mariner -362 224 65 22 56 0 0 chr2 145058145 145058181 -108198402 + AT_rich Low_complexity Low_complexity 1 36 0 3217 189 54 63 chr2 145060410 145061962 -108194621 - L1MA7 LINE L1 0 6291 4752 825 172 9 55 chr2 145061968 145062200 -108194383 - AluJb SINE Alu -20 292 5 7241 206 37 7 chr2 145062217 145063918 -108192665 - L1MA7 LINE L1 -1402 4744 2992 1340 238 43 7 chr2 145064133 145064436 -108192147 + MER58B DNA MER1_type 1 314 -27 374 115 0 0 chr2 145064713 145064765 -108191818 + MER66B LTR ERV1 295 346 -140 2095 193 14 12 chr2 145065409 145065833 -108190750 + L1MD1 LINE L1 678 1102 -5307 4502 260 75 35 chr2 145065835 145066528 -108190055 + L1MD1 LINE L1 2716 3380 -3026 5441 145 4 3 chr2 145066528 145067969 -108188614 + L1PA15 LINE L1 4721 6164 -1 4502 260 75 35 chr2 145067969 145068116 -108188467 + L1MD1 LINE L1 3380 3520 -2886 2302 107 0 0 chr2 145068116 145068424 -108188159 + AluSg SINE Alu 1 308 -2 4502 260 75 35 chr2 145068424 145069217 -108187366 + L1MD1 LINE L1 3520 4280 -2126 180 0 0 0 chr2 145069217 145069237 -108187346 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 4502 260 75 35 chr2 145069237 145069871 -108186712 + L1MD1 LINE L1 4280 5094 -1312 748 194 7 2 chr2 145069889 145070023 -108186560 - L1MC3 LINE L1 -2 7783 6201 4803 172 27 32 chr2 145070023 145071019 -108185564 - L1MC1 LINE L1 -177 6156 5172 1790 122 74 4 chr2 145071019 145071290 -108185293 - AluSp SINE Alu -21 292 3 4803 172 27 32 chr2 145071290 145071615 -108184968 - L1MC1 LINE L1 -1161 5172 4847 2945 233 51 19 chr2 145071618 145072744 -108183839 + L1MD1 LINE L1 5110 6281 -221 892 253 86 3 chr2 145072800 145073092 -108183491 + L1MD2 LINE L1 6018 6333 -26 21 0 0 0 chr2 145074653 145074674 -108181909 + AT_rich Low_complexity Low_complexity 1 21 0 207 259 0 35 chr2 145076430 145076515 -108180068 + T-rich Low_complexity Low_complexity 2 83 0 34 0 0 0 chr2 145076653 145076687 -108179896 + AT_rich Low_complexity Low_complexity 1 34 0 269 266 13 0 chr2 145076717 145076796 -108179787 - L1MC1 LINE L1 -1768 4378 4299 234 222 0 0 chr2 145076796 145076850 -108179733 + (TA)n Simple_repeat Simple_repeat 2 55 0 2348 183 47 2 chr2 145076881 145077373 -108179210 - L1MB1 LINE L1 -3 5989 5476 2011 45 0 0 chr2 145077401 145077646 -108178937 - L1PA3 LINE L1 -3 6152 5908 1929 22 0 0 chr2 145077646 145077926 -108178657 + L1P2 LINE L1 5212 5491 -664 384 94 0 0 chr2 145077925 145077978 -108178605 - L1MB1 LINE L1 -503 5489 5437 * 3604 214 11 64 chr2 145077973 145078076 -108178507 - L1MB1 LINE L1 -799 5171 5064 6130 17 1 0 chr2 145078076 145078781 -108177802 + L1PA2 LINE L1 5448 6153 -2 3604 214 11 64 chr2 145078781 145079680 -108176903 - L1MB1 LINE L1 -906 5064 4222 226 0 59 0 chr2 145079691 145079725 -108176858 + (CAAAAA)n Simple_repeat Simple_repeat 3 38 0 11071 105 9 3 chr2 145079726 145082116 -108174467 - L1PA8A LINE L1 -27 6104 3703 9911 155 13 1 chr2 145082121 145083830 -108172753 + L1PA8A LINE L1 1984 3712 -2434 7033 268 61 34 chr2 145083835 145088219 -108168364 - L1MB1 LINE L1 -1743 4227 13 23 0 0 0 chr2 145088766 145088789 -108167794 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 145089190 145089212 -108167371 + AT_rich Low_complexity Low_complexity 1 22 0 3853 262 30 10 chr2 145089908 145091110 -108165473 + L1M3de LINE L1 285 2183 -4516 23 0 0 0 chr2 145091223 145091246 -108165337 + AT_rich Low_complexity Low_complexity 1 23 0 626 309 80 10 chr2 145091670 145091871 -108164712 + MIR SINE MIR 47 261 -1 28 29 0 0 chr2 145092010 145092045 -108164538 + AT_rich Low_complexity Low_complexity 1 35 0 562 202 16 16 chr2 145092494 145092618 -108163965 + MER5C DNA MER1_type 1 124 -200 207 0 0 0 chr2 145092783 145092806 -108163777 + (CA)n Simple_repeat Simple_repeat 1 23 0 203 186 47 0 chr2 145092808 145092851 -108163732 + MER5C DNA MER1_type 277 321 -3 585 174 0 50 chr2 145093781 145093902 -108162681 - MER2 DNA MER2_type -136 209 95 527 229 16 8 chr2 145094090 145094212 -108162371 - MIR SINE MIR -6 256 134 2123 114 3 0 chr2 145094246 145094543 -108162040 - AluSp SINE Alu -15 298 1 33 0 0 0 chr2 145094553 145094586 -108161997 + AT_rich Low_complexity Low_complexity 1 33 0 287 279 0 0 chr2 145094586 145094654 -108161929 - MIR SINE MIR -121 141 74 205 140 0 40 chr2 145094836 145094886 -108161697 + (TTAA)n Simple_repeat Simple_repeat 3 50 0 191 294 235 0 chr2 145094898 145094966 -108161617 - L2 LINE L2 -24 3289 3206 206 197 169 70 chr2 145095532 145095603 -108160980 + MIR SINE MIR 119 196 -66 572 311 27 32 chr2 145095693 145095912 -108160671 + MIR SINE MIR 6 223 -39 542 371 65 0 chr2 145095929 145096161 -108160422 - MIR SINE MIR -14 248 2 280 297 201 0 chr2 145096165 145096349 -108160234 + MIR SINE MIR 5 231 -31 1056 262 121 28 chr2 145097431 145097926 -108158657 + MLT1F1 LTR MaLR 11 555 -12 1778 156 23 10 chr2 145099770 145100077 -108156506 + AluJo SINE Alu 2 312 0 235 235 0 0 chr2 145100253 145100304 -108156279 + (CATA)n Simple_repeat Simple_repeat 3 53 0 876 195 51 33 chr2 145100675 145100890 -108155693 - MER20 DNA MER1_type 0 219 1 328 285 121 17 chr2 145100943 145101431 -108155152 + L1M4 LINE L1 4175 4714 -1432 7497 152 40 16 chr2 145101524 145102849 -108153734 + Tigger1 DNA MER2_type 2 1358 -1060 1588 140 0 0 chr2 145102849 145103077 -108153506 + LTR8 LTR ERV1 464 691 0 3404 159 92 8 chr2 145103077 145103686 -108152897 - MER50 LTR ERV1 -74 660 1 662 256 87 0 chr2 145103686 145103928 -108152655 - L1ME2 LINE L1 -247 5917 5655 22 0 0 0 chr2 145104016 145104038 -108152545 + AT_rich Low_complexity Low_complexity 1 22 0 619 318 20 20 chr2 145104398 145104643 -108151940 + L1MC4 LINE L1 6707 6951 -1091 370 292 50 0 chr2 145104822 145104942 -108151641 - MIR SINE MIR -5 257 132 21 57 0 0 chr2 145105095 145105130 -108151453 + AT_rich Low_complexity Low_complexity 1 35 0 396 149 0 15 chr2 145105330 145105397 -108151186 - MLT1C LTR MaLR -401 66 1 323 292 173 25 chr2 145105420 145105663 -108150920 - L1ME2 LINE L1 -205 5942 5664 454 283 117 28 chr2 145105862 145106415 -108150168 - L1ME2 LINE L1 -535 5612 4998 3201 162 38 36 chr2 145106476 145107279 -108149304 - L1PA7 LINE L1 -9 6157 5329 1745 150 30 0 chr2 145107279 145107545 -108149038 - AluSp SINE Alu -37 276 3 3201 162 38 36 chr2 145107545 145108280 -108148303 - L1PA7 LINE L1 -837 5329 4597 2633 225 12 2 chr2 145108276 145108868 -108147715 + L1PA7 LINE L1 3995 4592 -1554 * 703 315 75 33 chr2 145108875 145108921 -108147662 - L1ME2 LINE L1 -1168 4961 4918 2221 213 33 21 chr2 145108921 145109378 -108147205 + MLT2B1 LTR ERVL 2 467 -53 252 0 0 0 chr2 145109378 145109406 -108147177 + (TC)n Simple_repeat Simple_repeat 1 28 0 2221 213 33 21 chr2 145109406 145109461 -108147122 + MLT2B1 LTR ERVL 467 520 0 703 315 75 33 chr2 145109461 145110084 -108146499 - L1ME2 LINE L1 -1211 4918 4264 402 179 54 12 chr2 145110188 145110356 -108146227 + (TATATG)n Simple_repeat Simple_repeat 2 176 0 347 303 134 11 chr2 145110436 145110892 -108145691 - L1ME2 LINE L1 -3434 2695 2184 201 182 0 0 chr2 145111139 145111172 -108145411 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 387 322 73 28 chr2 145111536 145111713 -108144870 - L1ME2 LINE L1 -4915 1204 1020 232 149 27 101 chr2 145112244 145112432 -108144151 + (TATAA)n Simple_repeat Simple_repeat 5 178 0 356 359 71 0 chr2 145113130 145113314 -108143269 - MIR SINE MIR -19 243 47 523 273 84 75 chr2 145114116 145114222 -108142361 - L2 LINE L2 0 3313 3209 1977 141 7 3 chr2 145114222 145114520 -108142063 + AluSq SINE Alu 1 299 -14 523 273 84 75 chr2 145114520 145114657 -108141926 - L2 LINE L2 -104 3209 3064 1063 228 148 86 chr2 145114657 145115271 -108141312 + MLT1E1 LTR MaLR 1 652 -2 523 273 84 75 chr2 145115271 145115348 -108141235 - L2 LINE L2 -249 3064 2989 2079 260 0 4 chr2 145116173 145116646 -108139937 - MER70A LTR ERVL -1 471 1 2378 42 0 3 chr2 145118561 145118885 -108137698 - AluY SINE Alu 0 324 2 2103 101 10 7 chr2 145120149 145120447 -108136136 + AluSc SINE Alu 1 299 -10 21 36 0 0 chr2 145120750 145120778 -108135805 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 145121000 145121021 -108135562 + AT_rich Low_complexity Low_complexity 1 21 0 1484 218 3 22 chr2 145121343 145121660 -108134923 + AluJb SINE Alu 1 311 -1 236 302 0 0 chr2 145121841 145121904 -108134679 + L1MC/D LINE L1 5534 5596 -2212 922 230 153 43 chr2 145121971 145122297 -108134286 + MLT1A1 LTR MaLR 1 362 -3 26 0 0 0 chr2 145122507 145122533 -108134050 + AT_rich Low_complexity Low_complexity 1 26 0 909 314 63 28 chr2 145122777 145123734 -108132849 + L1M4 LINE L1 4074 5063 -1083 300 238 30 30 chr2 145123865 145124029 -108132554 + (TA)n Simple_repeat Simple_repeat 1 164 0 1302 222 95 133 chr2 145125136 145125631 -108130952 - MLT2B3 LTR ERVL -78 476 1 3747 213 73 43 chr2 145125631 145126915 -108129668 - L1MDa LINE L1 -4209 2331 1009 5178 115 9 3 chr2 145126916 145127700 -108128883 + L1PA13 LINE L1 5374 6162 -1 226 273 0 25 chr2 145129411 145129532 -108127051 + (CATATA)n Simple_repeat Simple_repeat 2 119 0 484 291 40 7 chr2 145131074 145131222 -108125361 + MIR SINE MIR 20 172 -90 220 324 0 0 chr2 145131415 145131486 -108125097 + CT-rich Low_complexity Low_complexity 3 73 0 296 302 121 51 chr2 145131788 145132003 -108124580 + MIR SINE MIR 7 236 -26 568 239 78 74 chr2 145132025 145132055 -108124528 + MIR SINE MIR 32 60 -202 1718 175 23 37 chr2 145132055 145132403 -108124180 - MER2 DNA MER2_type 0 344 2 568 239 78 74 chr2 145132403 145132602 -108123981 + MIR SINE MIR 60 262 0 459 0 0 0 chr2 145132653 145132704 -108123879 + (CA)n Simple_repeat Simple_repeat 2 52 0 231 365 82 19 chr2 145133488 145133647 -108122936 - L2 LINE L2 -540 2774 2606 1419 186 14 4 chr2 145133790 145134065 -108122518 - L1MA6 LINE L1 -244 6056 5779 1093 201 12 4 chr2 145134090 145134334 -108122249 + L1MA6 LINE L1 6055 6300 0 740 77 0 60 chr2 145135051 145135168 -108121415 + L1PA8 LINE L1 6061 6170 -2 1058 147 6 17 chr2 145135172 145135349 -108121234 - L1MB1 LINE L1 -399 5769 5595 544 200 16 8 chr2 145135348 145135473 -108121110 + L1MB1 LINE L1 5779 5904 -264 * 180 0 0 0 chr2 145135473 145135493 -108121090 + (A)n Simple_repeat Simple_repeat 1 20 0 268 286 33 22 chr2 145135588 145135679 -108120904 + MER5A DNA MER1_type 97 188 -1 299 329 0 0 chr2 145135958 145136074 -108120509 + MLT1J LTR MaLR 69 174 -276 498 272 64 38 chr2 145137124 145137445 -108119138 + MLT1H LTR MaLR 175 534 -15 371 300 53 65 chr2 145137522 145137761 -108118822 - MIR SINE MIR 0 262 27 1188 214 67 67 chr2 145138440 145138808 -108117775 - L1ME1 LINE L1 -182 5984 5614 1656 201 33 25 chr2 145138808 145139176 -108117407 + MLT1A2 LTR MaLR 4 374 0 1188 214 67 67 chr2 145139176 145139194 -108117389 - L1ME1 LINE L1 -551 5615 5598 728 50 10 0 chr2 145140124 145140225 -108116358 + (TCTA)n Simple_repeat Simple_repeat 3 104 0 510 274 76 38 chr2 145141137 145141374 -108115209 + MLT1L LTR MaLR 364 609 -6 339 274 0 79 chr2 145143504 145143668 -108112915 - MIR SINE MIR -10 252 102 28 0 0 0 chr2 145145731 145145759 -108110824 + AT_rich Low_complexity Low_complexity 1 28 0 595 0 14 14 chr2 145145786 145145860 -108110723 - MADE1 DNA Mariner -1 79 6 475 249 142 72 chr2 145145854 145146200 -108110383 + MLT1J1 LTR MaLR 25 394 -52 * 351 0 0 0 chr2 145146202 145146241 -108110342 + (TG)n Simple_repeat Simple_repeat 2 40 0 766 225 100 5 chr2 145146302 145146502 -108110081 + MER20 DNA MER1_type 1 219 0 200 240 0 20 chr2 145146772 145146822 -108109761 + (CATA)n Simple_repeat Simple_repeat 1 49 0 325 325 16 57 chr2 145147302 145147330 -108109253 - L2 LINE L2 -3 3269 3241 2202 111 3 0 chr2 145147330 145147637 -108108946 - AluSp SINE Alu -5 308 1 325 325 16 57 chr2 145147637 145147731 -108108852 - L2 LINE L2 -31 3241 3152 1167 205 25 29 chr2 145148123 145148367 -108108216 - MLT1B LTR MaLR 0 390 148 1899 145 16 10 chr2 145148368 145148678 -108107905 + AluSx SINE Alu 1 312 0 621 126 0 8 chr2 145148686 145148920 -108107663 + AluSx SINE Alu 1 309 -1 917 147 20 7 chr2 145148949 145149099 -108107484 - MLT1B LTR MaLR -238 152 1 180 0 0 0 chr2 145150699 145150719 -108105864 + (A)n Simple_repeat Simple_repeat 1 20 0 230 75 50 0 chr2 145152439 145152479 -108104104 + A-rich Low_complexity Low_complexity 2 43 0 245 224 0 45 chr2 145152814 145152881 -108103702 + (TTTA)n Simple_repeat Simple_repeat 3 66 0 1153 49 0 0 chr2 145153953 145154097 -108102486 - AluY SINE Alu -6 305 162 204 135 0 0 chr2 145154315 145154352 -108102231 + (TC)n Simple_repeat Simple_repeat 2 38 0 190 228 193 0 chr2 145154576 145154633 -108101950 + L2 LINE L2 3246 3313 0 487 302 50 54 chr2 145156349 145156571 -108100012 - MIR SINE MIR -39 223 3 208 359 165 0 chr2 145156896 145156999 -108099584 - L2 LINE L2 -9 3263 3144 22 35 0 0 chr2 145157622 145157651 -108098932 + AT_rich Low_complexity Low_complexity 1 29 0 226 241 0 0 chr2 145158135 145158189 -108098394 + CT-rich Low_complexity Low_complexity 1 54 0 2086 110 3 0 chr2 145158189 145158471 -108098112 - AluSc SINE Alu -26 283 1 549 0 0 0 chr2 145159334 145159395 -108097188 + (TA)n Simple_repeat Simple_repeat 2 62 0 23 0 0 0 chr2 145159636 145159659 -108096924 + AT_rich Low_complexity Low_complexity 1 23 0 2383 93 3 0 chr2 145160161 145160462 -108096121 - AluSg SINE Alu -6 304 3 6371 159 33 12 chr2 145161312 145161855 -108094728 - L1MA8 LINE L1 0 6291 5761 1630 208 94 5 chr2 145161855 145162249 -108094334 + MSTB1 LTR MaLR 4 432 0 6371 159 33 12 chr2 145162249 145163887 -108092696 - L1MA8 LINE L1 -530 5761 4063 298 376 73 32 chr2 145164437 145164655 -108091928 - L2 LINE L2 0 3272 3046 1713 128 20 3 chr2 145165599 145165896 -108090687 - L1MA3 LINE L1 0 6305 6004 757 317 184 30 chr2 145166031 145167247 -108089336 + L2 LINE L2 1897 3313 0 211 299 26 53 chr2 145170132 145170246 -108086337 + MIR SINE MIR 43 153 -55 209 308 19 0 chr2 145170363 145170415 -108086168 + MIR3 SINE MIR 142 194 -14 432 242 90 71 chr2 145172157 145172525 -108084058 + L1MC4 LINE L1 7680 7994 -1 351 0 0 0 chr2 145172848 145172887 -108083696 + (TG)n Simple_repeat Simple_repeat 1 39 0 354 74 0 0 chr2 145172887 145172941 -108083642 + (GA)n Simple_repeat Simple_repeat 2 55 0 271 351 37 22 chr2 145172972 145173106 -108083477 + MIR SINE MIR 16 151 -57 711 241 44 20 chr2 145173116 145173319 -108083264 + MER3 DNA MER1_type 2 209 0 286 321 55 18 chr2 145173346 145173455 -108083128 + MIR SINE MIR 42 154 -108 22 56 0 0 chr2 145173974 145174010 -108082573 + AT_rich Low_complexity Low_complexity 1 36 0 7935 13 0 13 chr2 145174578 145175868 -108080715 - L1PA3 LINE L1 0 6155 4873 507 150 0 0 chr2 145176876 145176956 -108079627 - MADE1 DNA Mariner 0 80 1 231 278 0 0 chr2 145177014 145177068 -108079515 - L2 LINE L2 -4 3309 3256 25 31 0 0 chr2 145177633 145177665 -108078918 + AT_rich Low_complexity Low_complexity 1 32 0 180 235 0 0 chr2 145178076 145178110 -108078473 - L2 LINE L2 0 3272 3239 289 316 203 0 chr2 145179893 145180051 -108076532 + L3 LINE CR1 234 423 -1154 23 33 0 0 chr2 145180379 145180409 -108076174 + AT_rich Low_complexity Low_complexity 1 30 0 244 274 151 9 chr2 145181368 145181474 -108075109 + L2 LINE L2 3151 3271 -1 677 204 208 4 chr2 145181822 145182048 -108074535 + MER33 DNA MER1_type 7 278 -46 24 0 0 0 chr2 145182582 145182606 -108073977 + AT_rich Low_complexity Low_complexity 1 24 0 2566 109 82 10 chr2 145182764 145183135 -108073448 + MLT2A1 LTR ERVL 1 406 -38 186 43 0 0 chr2 145183135 145183158 -108073425 + (TG)n Simple_repeat Simple_repeat 2 24 0 2566 109 82 10 chr2 145183158 145183200 -108073383 + MLT2A1 LTR ERVL 406 444 0 43825 77 6 6 chr2 145183200 145185463 -108071120 + HERVL-A1-A1 LTR ERVL 1 2262 -3392 2221 108 0 13 chr2 145185463 145185778 -108070805 + AluY SINE Alu 1 311 0 43825 77 6 6 chr2 145185778 145189164 -108067419 + HERVL-A1-A1 LTR ERVL 2262 5652 -2 2644 82 114 10 chr2 145189166 145189568 -108067015 + MLT2A1 LTR ERVL 1 444 0 367 305 55 39 chr2 145189827 145189955 -108066628 + L2 LINE L2 3134 3263 -9 566 352 14 18 chr2 145190578 145190797 -108065786 + MIR SINE MIR 2 219 -43 226 372 35 0 chr2 145190930 145191016 -108065567 + MIR SINE MIR 7 95 -167 329 75 19 0 chr2 145191117 145191170 -108065413 + (TAGA)n Simple_repeat Simple_repeat 1 54 0 482 331 53 35 chr2 145192090 145192164 -108064419 + LTR16C LTR ERVL 148 219 -272 2032 152 126 5 chr2 145192164 145192546 -108064037 + MSTA LTR MaLR 1 428 0 482 331 53 35 chr2 145192546 145192809 -108063774 + LTR16C LTR ERVL 219 491 0 2140 72 4 0 chr2 145193558 145193837 -108062746 + THE1B-int LTR MaLR 1301 1580 0 1541 93 5 5 chr2 145193837 145194053 -108062530 + THE1B LTR MaLR 1 216 -148 213 347 67 33 chr2 145194841 145194991 -108061592 - L2 LINE L2 -577 2737 2583 1684 134 86 4 chr2 145196257 145196526 -108060057 - AluSg SINE Alu -15 295 5 21 0 0 0 chr2 145196853 145196874 -108059709 + AT_rich Low_complexity Low_complexity 1 21 0 1765 175 101 28 chr2 145197384 145197819 -108058764 - MLT1C LTR MaLR 0 467 1 338 299 72 2 chr2 145198461 145198631 -108057952 + MIR SINE MIR 33 252 -10 24 32 0 0 chr2 145198718 145198749 -108057834 + AT_rich Low_complexity Low_complexity 1 31 0 237 333 78 26 chr2 145199143 145199569 -108057014 + L1ME4a LINE L1 5545 5992 -129 270 337 93 48 chr2 145200017 145200605 -108055978 - L2 LINE L2 -1064 2250 1636 290 253 77 22 chr2 145200813 145200904 -108055679 - MIR SINE MIR -119 143 48 23 0 0 0 chr2 145201739 145201762 -108054821 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 145202941 145202964 -108053619 + AT_rich Low_complexity Low_complexity 1 23 0 242 326 53 0 chr2 145202983 145203115 -108053468 + MIR SINE MIR 93 231 -31 21 0 0 0 chr2 145204094 145204115 -108052468 + AT_rich Low_complexity Low_complexity 1 21 0 6143 71 24 1 chr2 145204915 145205789 -108050794 + L1PA5 LINE L1 5257 6150 -4 252 59 0 0 chr2 145205859 145205893 -108050690 + (TG)n Simple_repeat Simple_repeat 2 35 0 21 0 0 0 chr2 145205897 145205918 -108050665 + AT_rich Low_complexity Low_complexity 1 21 0 715 310 119 29 chr2 145206303 145206783 -108049800 + L1MEd LINE L1 318 840 -5279 542 214 0 34 chr2 145207486 145207603 -108048980 - L1M4 LINE L1 -1198 4948 4836 661 270 30 57 chr2 145207630 145207963 -108048620 - L1M4 LINE L1 -1288 4858 4535 1367 153 5 18 chr2 145207963 145208186 -108048397 - AluJb SINE Alu -8 304 85 5062 251 59 39 chr2 145208186 145208465 -108048118 - L1M4 LINE L1 -1602 4544 4272 2629 39 0 0 chr2 145208465 145208772 -108047811 - AluY SINE Alu -4 307 1 5062 251 59 39 chr2 145208772 145209958 -108046625 - L1M4 LINE L1 -1874 4272 3024 192 77 0 0 chr2 145209958 145209984 -108046599 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 5062 251 59 39 chr2 145209984 145210577 -108046006 - L1M4 LINE L1 -3122 3024 2444 267 325 137 8 chr2 145210579 145210696 -108045887 - L1MDa LINE L1 -5761 779 648 1982 124 0 7 chr2 145211160 145211469 -108045114 - AluSx SINE Alu 0 307 1 686 294 46 67 chr2 145211481 145211672 -108044911 + HAL1b LINE L1 100 293 -1055 1921 139 13 13 chr2 145211672 145211982 -108044601 + AluSx SINE Alu 1 310 -2 686 294 46 67 chr2 145211982 145212286 -108044297 + HAL1b LINE L1 293 585 -763 243 311 0 0 chr2 145212287 145212348 -108044235 - L2 LINE L2 -1 3271 3211 227 284 0 0 chr2 145212352 145212419 -108044164 + HAL1b LINE L1 590 656 -692 246 304 0 0 chr2 145212535 145212614 -108043969 + (TA)n Simple_repeat Simple_repeat 1 79 0 279 0 0 0 chr2 145212619 145212650 -108043933 + (TG)n Simple_repeat Simple_repeat 2 32 0 219 363 55 11 chr2 145212651 145212742 -108043841 - MIR SINE MIR -165 97 3 369 241 57 32 chr2 145212792 145212950 -108043633 + HAL1b LINE L1 763 924 -424 1008 208 134 0 chr2 145212950 145213166 -108043417 + AluJb SINE Alu 40 284 -28 1152 243 106 83 chr2 145213867 145214793 -108041790 - L1MC5 LINE L1 -575 7386 6501 1855 132 32 0 chr2 145216160 145216440 -108040143 - AluSx SINE Alu -20 292 4 1661 186 58 27 chr2 145217329 145217701 -108038882 + MLT2D LTR ERVL 1 535 -19 400 138 17 44 chr2 145217701 145217882 -108038701 + (TA)n Simple_repeat Simple_repeat 1 176 0 227 170 43 0 chr2 145218041 145218088 -108038495 - MLT2D LTR ERVL 0 414 366 403 185 16 43 chr2 145218090 145218274 -108038309 + (TA)n Simple_repeat Simple_repeat 1 179 0 341 173 0 64 chr2 145218287 145218460 -108038123 + (TA)n Simple_repeat Simple_repeat 1 162 0 414 0 0 0 chr2 145218502 145218548 -108038035 + (CA)n Simple_repeat Simple_repeat 2 47 0 1628 163 7 0 chr2 145218671 145218965 -108037618 - L1MB1 LINE L1 -1 6167 5872 291 183 21 11 chr2 145219197 145219290 -108037293 + (TA)n Simple_repeat Simple_repeat 1 94 0 216 0 0 0 chr2 145219291 145219315 -108037268 + (TG)n Simple_repeat Simple_repeat 2 25 0 366 333 22 7 chr2 145219504 145219642 -108036941 - MIR SINE MIR -37 225 86 335 355 89 9 chr2 145220603 145220817 -108035766 - MIR SINE MIR -12 250 20 283 245 38 19 chr2 145221069 145221175 -108035408 - L1M4 LINE L1 -2160 3986 3879 189 172 0 0 chr2 145222050 145222079 -108034504 - L3 LINE CR1 -1377 200 172 335 345 96 43 chr2 145222145 145222519 -108034064 - L1MC5 LINE L1 -1868 5940 5547 311 322 141 20 chr2 145223633 145223782 -108032801 - MIR SINE MIR -76 186 20 661 271 79 38 chr2 145223891 145224243 -108032340 + L2 LINE L2 2627 2998 -274 288 331 98 0 chr2 145224223 145224356 -108032227 + L2 LINE L2 3163 3308 -5 * 200 204 0 41 chr2 145224357 145224406 -108032177 + (TAAA)n Simple_repeat Simple_repeat 4 50 0 235 348 27 53 chr2 145224465 145224537 -108032046 - L2 LINE L2 -214 3058 2986 2281 189 19 2 chr2 145224537 145224956 -108031627 + MSTB LTR MaLR 1 426 0 235 348 27 53 chr2 145224956 145225070 -108031513 - L2 LINE L2 -286 2986 2877 866 259 71 16 chr2 145225203 145225634 -108030949 - LTR33 LTR ERVL -28 493 3 198 143 0 0 chr2 145226420 145226455 -108030128 + (GAAAA)n Simple_repeat Simple_repeat 2 36 0 249 189 0 44 chr2 145226669 145226755 -108029828 + MER21A LTR ERV1 390 535 -396 3137 79 15 0 chr2 145227185 145227592 -108028991 + MLT2A2 LTR ERVL 1 413 -40 365 217 31 0 chr2 145227592 145227721 -108028862 + (TA)n Simple_repeat Simple_repeat 2 134 0 374 101 0 8 chr2 145227721 145227781 -108028802 + MLT2A2 LTR ERVL 403 453 0 276 340 91 14 chr2 145231325 145231534 -108025049 - L3b LINE CR1 -226 1357 1133 1677 180 28 0 chr2 145232206 145232495 -108024088 - AluSx SINE Alu -15 297 1 21 57 0 0 chr2 145234067 145234102 -108022481 + AT_rich Low_complexity Low_complexity 1 35 0 202 298 96 21 chr2 145234400 145234494 -108022089 - L2 LINE L2 -38 3234 3134 227 301 36 24 chr2 145234695 145234778 -108021805 - L2 LINE L2 -676 2638 2555 2406 39 0 0 chr2 145234844 145235124 -108021459 - AluY SINE Alu -31 280 1 2086 129 7 0 chr2 145235537 145235847 -108020736 + AluSq SINE Alu 1 312 -1 266 295 9 9 chr2 145236159 145236271 -108020312 - HAL1b LINE L1 -235 1113 1002 1378 143 0 0 chr2 145236473 145236676 -108019907 + AluSx SINE Alu 5 207 -105 7521 122 15 0 chr2 145236714 145238110 -108018473 - L1P4 LINE L1 -589 5579 4163 33 25 0 0 chr2 145238110 145238150 -108018433 + AT_rich Low_complexity Low_complexity 1 40 0 542 338 54 5 chr2 145238150 145238372 -108018211 + MIR SINE MIR 20 252 -10 629 140 10 0 chr2 145238553 145238653 -108017930 + AluSq/x SINE Alu 40 140 -173 3841 102 19 5 chr2 145238653 145239232 -108017351 + L1PA10 LINE L1 5577 6163 -5 235 215 185 0 chr2 145239459 145239524 -108017059 - MLT1I LTR MaLR -241 168 92 3973 208 66 10 chr2 145240028 145241205 -108015378 + L1MD1 LINE L1 4978 6220 -22 198 0 0 0 chr2 145242980 145243002 -108013581 + (CA)n Simple_repeat Simple_repeat 2 23 0 929 105 17 22 chr2 145243646 145243827 -108012756 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 558 219 230 11 chr2 145244561 145244748 -108011835 - MIR SINE MIR -16 246 19 21 82 0 0 chr2 145244893 145244942 -108011641 + AT_rich Low_complexity Low_complexity 1 49 0 344 231 13 0 chr2 145245275 145245353 -108011230 + MIR SINE MIR 74 152 -110 2479 42 3 10 chr2 145245363 145245670 -108010913 + AluY SINE Alu 1 305 -6 1574 187 29 0 chr2 145245674 145245947 -108010636 + AluJo SINE Alu 1 281 -31 233 29 29 0 chr2 145245947 145245981 -108010602 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 851 292 21 0 chr2 145246202 145246435 -108010148 + MIR SINE MIR 20 257 -5 228 35 0 0 chr2 145246905 145246934 -108009649 + (CA)n Simple_repeat Simple_repeat 2 30 0 291 350 119 12 chr2 145249104 145249264 -108007319 - MER5B DNA MER1_type -1 177 1 489 314 29 23 chr2 145249457 145249629 -108006954 + MER63A DNA MER1_type 38 210 0 24 0 0 0 chr2 145249965 145249989 -108006594 + AT_rich Low_complexity Low_complexity 1 24 0 2221 108 9 0 chr2 145253011 145253334 -108003249 - L1MA1 LINE L1 -405 5897 5572 1827 137 6 82 chr2 145253996 145254361 -108002222 + MER1B DNA MER1_type 1 337 0 1069 281 103 25 chr2 145254615 145255089 -108001494 - MLT1G1 LTR MaLR 0 595 85 291 287 20 99 chr2 145256600 145256893 -107999690 - LTR67 LTR ERVL -7 550 281 418 183 32 21 chr2 145256968 145257061 -107999522 - MLT1B LTR MaLR 0 390 297 369 288 89 69 chr2 145257900 145258247 -107998336 + L1M4 LINE L1 2133 2486 -3660 762 101 0 0 chr2 145258257 145258366 -107998217 - AluSg/x SINE Alu -16 296 188 1466 143 0 0 chr2 145258366 145258583 -107998000 - AluSg SINE Alu -93 217 1 385 287 111 60 chr2 145258784 145258918 -107997665 + L1MC/D LINE L1 5329 5455 -789 2251 70 0 11 chr2 145258918 145259205 -107997378 + AluY SINE Alu 1 284 -27 238 33 0 0 chr2 145259205 145259235 -107997348 + (CAAAA)n Simple_repeat Simple_repeat 2 80 0 385 287 111 60 chr2 145259235 145259529 -107997054 + L1MC/D LINE L1 5455 5784 -460 281 353 60 9 chr2 145261716 145261832 -107994751 + L2 LINE L2 3151 3272 0 1979 169 54 5 chr2 145262750 145263122 -107993461 + MLT1B LTR MaLR 1 390 0 13417 209 47 17 chr2 145263620 145269341 -107987242 + L1PB1 LINE L1 1 6103 -764 2212 112 0 0 chr2 145269341 145269645 -107986938 + AluY SINE Alu 1 304 -7 13417 209 47 17 chr2 145269645 145269792 -107986791 + L1PB1 LINE L1 6103 6244 -623 3216 114 18 6 chr2 145269799 145269935 -107986648 + L1PB1 LINE L1 6361 6494 -373 342 0 0 0 chr2 145269935 145269973 -107986610 + (CA)n Simple_repeat Simple_repeat 2 39 0 3216 114 18 6 chr2 145269973 145270334 -107986249 + L1PB1 LINE L1 6494 6864 -3 581 294 18 46 chr2 145270350 145270568 -107986015 + MIR SINE MIR 11 222 -40 297 348 34 11 chr2 145270941 145271030 -107985553 + L2 LINE L2 3147 3237 -35 264 313 50 0 chr2 145272401 145272500 -107984083 + MIR SINE MIR 40 143 -65 31 0 0 0 chr2 145272645 145272676 -107983907 + AT_rich Low_complexity Low_complexity 1 31 0 2132 119 3 0 chr2 145272676 145272962 -107983621 - AluSq SINE Alu -26 287 1 260 297 56 119 chr2 145274181 145274501 -107982082 - L2 LINE L2 -3 3269 2970 21 0 0 0 chr2 145275487 145275508 -107981075 + AT_rich Low_complexity Low_complexity 1 21 0 36 40 0 0 chr2 145276091 145276141 -107980442 + AT_rich Low_complexity Low_complexity 1 50 0 215 61 30 0 chr2 145276430 145276463 -107980120 + (CA)n Simple_repeat Simple_repeat 2 35 0 493 310 59 67 chr2 145276764 145277241 -107979342 - MLT1H LTR MaLR -2 547 75 348 299 70 30 chr2 145277421 145277622 -107978961 + L1ME LINE L1 5609 5817 -304 360 0 0 0 chr2 145279921 145279961 -107976622 + (CA)n Simple_repeat Simple_repeat 2 41 0 259 330 115 22 chr2 145280016 145280198 -107976385 + L2 LINE L2 1710 1908 -1406 2295 80 3 0 chr2 145280199 145280520 -107976063 + AluY SINE Alu 1 322 0 185 333 0 29 chr2 145281107 145281176 -107975407 + L2 LINE L2 3205 3271 -1 301 379 35 0 chr2 145281277 145281393 -107975190 + MIR3 SINE MIR 68 187 -21 666 302 96 46 chr2 145282541 145283018 -107973565 - LTR33 LTR ERVL -2 519 19 273 370 10 35 chr2 145283568 145283768 -107972815 - HERV16 LTR ERVL -3550 1446 1252 1423 312 44 51 chr2 145283919 145284762 -107971821 - HERV16 LTR ERVL -3795 1201 365 434 299 41 30 chr2 145284846 145285043 -107971540 - HERV16 LTR ERVL -4758 238 40 876 279 102 4 chr2 145285056 145285321 -107971262 - LTR16A LTR ERVL -4 446 156 509 376 24 6 chr2 145286142 145286307 -107970276 - MER91A DNA MER1_type -28 168 1 568 330 80 9 chr2 145290177 145290389 -107966194 - MIR SINE MIR -19 243 17 21153 27 6 0 chr2 145290665 145293952 -107962631 + L1PA3 LINE L1 2864 6155 0 246 241 25 13 chr2 145294493 145294572 -107962011 + CT-rich Low_complexity Low_complexity 2 81 0 237 65 0 0 chr2 145294573 145294604 -107961979 + (CA)n Simple_repeat Simple_repeat 2 32 0 257 289 40 0 chr2 145295404 145295480 -107961103 - MIR3 SINE MIR -41 167 89 28 0 0 0 chr2 145296849 145296877 -107959706 + AT_rich Low_complexity Low_complexity 1 28 0 252 0 0 0 chr2 145297228 145297256 -107959327 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 2092 132 30 0 chr2 145298209 145298512 -107958071 + AluSx SINE Alu 1 312 0 1391 205 14 40 chr2 145298571 145298868 -107957715 + AluJo SINE Alu 1 289 -23 23 68 0 0 chr2 145300042 145300086 -107956497 + AT_rich Low_complexity Low_complexity 1 44 0 22 0 0 0 chr2 145303269 145303291 -107953292 + AT_rich Low_complexity Low_complexity 1 22 0 199 284 30 30 chr2 145303297 145303364 -107953219 - MIR3 SINE MIR -15 193 127 2166 102 0 13 chr2 145303416 145303731 -107952852 - AluSp SINE Alu -2 311 1 48 60 0 0 chr2 145303880 145303963 -107952620 + AT_rich Low_complexity Low_complexity 1 83 0 228 200 86 14 chr2 145304152 145304222 -107952361 - MLT1H LTR MaLR -31 564 490 185 222 16 0 chr2 145304914 145304977 -107951606 + (CAA)n Simple_repeat Simple_repeat 1 64 0 1239 231 67 14 chr2 145308216 145308562 -107948021 + MLT1A1 LTR MaLR 2 365 0 24 32 0 0 chr2 145308724 145308755 -107947828 + AT_rich Low_complexity Low_complexity 1 31 0 2008 98 0 8 chr2 145310019 145310285 -107946298 + AluY SINE Alu 3 266 -45 24 0 0 0 chr2 145311289 145311313 -107945270 + AT_rich Low_complexity Low_complexity 1 24 0 543 327 190 19 chr2 145311410 145311841 -107944742 + L2 LINE L2 2805 3309 -4 232 64 43 21 chr2 145312247 145312294 -107944289 + (TAAAAA)n Simple_repeat Simple_repeat 3 50 0 1034 144 80 49 chr2 145313827 145314090 -107942493 + L1MCa LINE L1 1806 2076 -4350 2601 221 29 8 chr2 145314094 145314873 -107941710 - L1MCa LINE L1 -3126 3300 2485 1738 206 56 40 chr2 145314873 145315300 -107941283 - Tigger2a DNA MER2_type 0 434 1 2601 221 29 8 chr2 145315300 145315727 -107940856 - L1MCa LINE L1 -3941 2485 2068 * 6579 220 39 64 chr2 145315722 145317653 -107938930 + L1P LINE L1 1853 3728 -2418 271 22 0 65 chr2 145317653 145317699 -107938884 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 6579 220 39 64 chr2 145317699 145317868 -107938715 + L1P LINE L1 3728 3900 -2246 993 117 11 17 chr2 145317868 145318047 -107938536 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 647 283 163 47 chr2 145318420 145318886 -107937697 - MLT1H LTR MaLR -17 532 13 2033 140 7 10 chr2 145319180 145319488 -107937095 + AluSx SINE Alu 3 309 -3 240 174 163 61 chr2 145319495 145319593 -107936990 - Charlie8 DNA MER1_type -2290 127 20 2124 108 4 0 chr2 145320093 145320415 -107936168 - AluSg SINE Alu 0 325 3 22 0 0 0 chr2 145320871 145320893 -107935690 + AT_rich Low_complexity Low_complexity 1 22 0 690 122 48 7 chr2 145322364 145322676 -107933907 + GA-rich Low_complexity Low_complexity 1 325 0 490 301 67 14 chr2 145323801 145324010 -107932573 - L3 LINE CR1 -3 1574 1355 212 382 11 11 chr2 145324977 145325066 -107931517 + MIR SINE MIR 6 94 -168 839 298 57 31 chr2 145325115 145325498 -107931085 + MLT1I LTR MaLR 3 395 -14 2072 132 0 6 chr2 145325597 145325908 -107930675 - AluSc SINE Alu 0 309 1 1872 204 31 65 chr2 145326290 145326766 -107929817 - MLT1C LTR MaLR -7 460 1 258 81 0 0 chr2 145327019 145327056 -107929527 + (TG)n Simple_repeat Simple_repeat 1 37 0 1976 140 3 3 chr2 145327383 145327676 -107928907 + AluSx SINE Alu 1 293 -19 1679 129 115 0 chr2 145327869 145328148 -107928435 - AluSx SINE Alu -1 311 1 196 375 88 0 chr2 145328998 145329134 -107927449 - L3b LINE CR1 -11 1572 1425 18079 107 2 3 chr2 145329154 145332615 -107923968 - L1PA7 LINE L1 0 6154 2695 4437 93 5 2 chr2 145332615 145333257 -107923326 + L1PA7 LINE L1 2051 2694 -3452 1973 151 0 3 chr2 145333315 145333626 -107922957 - AluSx SINE Alu 0 312 3 484 185 159 45 chr2 145333665 145333822 -107922761 - MER5A DNA MER1_type -6 183 9 2102 130 48 25 chr2 145335392 145335746 -107920837 + THE1B LTR MaLR 1 362 -2 11148 114 4 3 chr2 145335746 145337321 -107919262 + THE1B-int LTR MaLR 2 1580 0 698 243 24 12 chr2 145337324 145337493 -107919090 + MLT1C LTR MaLR 297 467 0 414 0 0 0 chr2 145338781 145338827 -107917756 + (CA)n Simple_repeat Simple_repeat 2 47 0 1997 150 0 7 chr2 145340002 145340309 -107916274 + AluSg SINE Alu 3 307 -3 181 361 53 38 chr2 145340347 145340480 -107916103 + L2 LINE L2 2670 2804 -510 1534 187 48 3 chr2 145341283 145341572 -107915011 + AluJb SINE Alu 1 302 -10 333 333 19 0 chr2 145342630 145342738 -107913845 + MIR SINE MIR 11 120 -142 2106 178 8 5 chr2 145342914 145343301 -107913282 - MLT1B LTR MaLR -2 388 1 288 259 12 0 chr2 145343734 145343815 -107912768 - MIR SINE MIR -1 261 180 185 222 0 97 chr2 145344168 145344240 -107912343 - MIR SINE MIR -134 128 64 2078 144 0 0 chr2 145344638 145344937 -107911646 + AluSx SINE Alu 1 299 -13 212 402 8 16 chr2 145345967 145346094 -107910489 - L2 LINE L2 -167 3105 2980 1750 162 71 71 chr2 145346883 145347303 -107909280 + MSTB1 LTR MaLR 1 420 -12 552 192 12 105 chr2 145347410 145347582 -107909001 + L1MA10 LINE L1 6178 6333 -1 2154 117 3 0 chr2 145348599 145348890 -107907693 - AluSc SINE Alu -17 292 1 185 0 0 39 chr2 145349112 145349138 -107907445 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 315 71 0 0 chr2 145349413 145349455 -107907128 + (A)n Simple_repeat Simple_repeat 1 42 0 204 143 0 0 chr2 145349535 145349577 -107907006 + (TG)n Simple_repeat Simple_repeat 1 42 0 216 340 10 10 chr2 145349787 145349887 -107906696 + MIR SINE MIR 148 247 -15 1851 147 3 27 chr2 145353394 145353694 -107902889 - AluJo SINE Alu -19 293 1 545 221 76 8 chr2 145353970 145354101 -107902482 + MLT1I LTR MaLR 2 141 -268 260 25 150 0 chr2 145354212 145354296 -107902287 + L1PA3 LINE L1 6107 6196 0 369 280 160 13 chr2 145354296 145354446 -107902137 + MLT1I LTR MaLR 232 403 -6 7788 15 0 0 chr2 145354857 145356105 -107900478 + L1PA3 LINE L1 4921 6168 0 191 111 0 28 chr2 145358696 145358732 -107897851 + (GAA)n Simple_repeat Simple_repeat 2 36 0 270 56 0 0 chr2 145358762 145358798 -107897785 + (TGG)n Simple_repeat Simple_repeat 3 38 0 2414 113 31 3 chr2 145359495 145359849 -107896734 - THE1B LTR MaLR 0 364 1 2276 197 22 75 chr2 145360046 145360631 -107895952 - MLT2B3 LTR ERVL 0 554 1 1768 172 0 10 chr2 145361462 145361765 -107894818 - AluJo SINE Alu -12 300 1 625 251 99 0 chr2 145361991 145362162 -107894421 + MER5A DNA MER1_type 2 189 0 1134 195 46 29 chr2 145364292 145364599 -107891984 - MER33 DNA MER1_type -11 313 2 2107 129 129 16 chr2 145364974 145365353 -107891230 + MSTA LTR MaLR 7 428 0 245 302 243 15 chr2 145365876 145366078 -107890505 + Charlie2a DNA MER1_type 186 433 -2349 2067 260 30 21 chr2 145366160 145366722 -107889861 + MLT1E2 LTR MaLR 60 626 0 782 261 42 58 chr2 145366725 145367055 -107889528 + Charlie2a DNA MER1_type 495 819 -2043 289 275 11 22 chr2 145367267 145367358 -107889225 - MERVL LTR ERVL -971 4514 4425 1121 362 22 24 chr2 145367484 145367795 -107888788 - MERVL LTR ERVL -1333 4321 4010 2381 79 0 0 chr2 145367795 145368086 -107888497 - AluY SINE Alu -20 291 1 1121 362 22 24 chr2 145368086 145368370 -107888213 - MERVL LTR ERVL -1644 4010 3727 255 314 29 67 chr2 145368658 145368868 -107887715 - MERVL LTR ERVL -2325 3439 3238 560 334 57 35 chr2 145369054 145369545 -107887038 - MERVL LTR ERVL -2766 2998 2497 274 384 45 5 chr2 145369633 145369831 -107886752 - MERVL LTR ERVL -3337 2317 2112 2283 224 42 22 chr2 145371482 145372023 -107884560 - MLT2B3 LTR ERVL -2 552 1 209 286 29 14 chr2 145372450 145372520 -107884063 - MIR SINE MIR -55 153 83 269 107 27 27 chr2 145373621 145373633 -107882950 + (TA)n Simple_repeat Simple_repeat 1 12 -63 3403 185 48 11 chr2 145373633 145374362 -107882221 - L1MD1 LINE L1 -6 6236 5481 269 107 27 27 chr2 145374362 145374424 -107882159 + (TA)n Simple_repeat Simple_repeat 11 75 0 234 208 0 21 chr2 145374441 145374504 -107882079 + (TATATG)n Simple_repeat Simple_repeat 1 61 0 2408 227 70 27 chr2 145374537 145375655 -107880928 - L1MD1 LINE L1 -743 5403 4316 367 228 142 8 chr2 145375794 145375921 -107880662 - MLT1H LTR MaLR 0 549 406 205 68 45 23 chr2 145378306 145378350 -107878233 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 2025 128 0 0 chr2 145378353 145378643 -107877940 - AluSx SINE Alu 0 312 23 455 318 94 49 chr2 145378764 145378987 -107877596 + MIR SINE MIR 30 262 0 2364 109 0 0 chr2 145379004 145379306 -107877277 + AluSq SINE Alu 3 304 -9 21 0 0 0 chr2 145379416 145379437 -107877146 + AT_rich Low_complexity Low_complexity 1 21 0 25 65 0 0 chr2 145380074 145380120 -107876463 + AT_rich Low_complexity Low_complexity 1 46 0 204 327 0 0 chr2 145380197 145380252 -107876331 - L2 LINE L2 -9 3304 3250 14131 134 32 24 chr2 145380424 145382798 -107873785 + L1P LINE L1 2832 5231 -915 363 23 0 0 chr2 145382798 145382842 -107873741 + (CA)n Simple_repeat Simple_repeat 1 44 0 14131 134 32 24 chr2 145382842 145382969 -107873614 + L1P LINE L1 5231 5355 -791 1367 201 0 24 chr2 145382970 145383224 -107873359 - AluJo SINE Alu -56 256 9 2227 110 0 0 chr2 145384087 145384386 -107872197 + AluSg SINE Alu 1 299 -11 24 53 0 0 chr2 145384676 145384714 -107871869 + AT_rich Low_complexity Low_complexity 1 38 0 30 45 0 0 chr2 145385051 145385095 -107871488 + AT_rich Low_complexity Low_complexity 1 44 0 207 0 0 0 chr2 145386081 145386104 -107870479 + (TTGG)n Simple_repeat Simple_repeat 2 24 0 361 349 31 31 chr2 145386160 145386355 -107870228 + MIR3 SINE MIR 14 208 0 250 231 58 29 chr2 145387481 145387585 -107868998 - L1ME4a LINE L1 -59 6062 5956 2004 157 62 48 chr2 145388182 145388545 -107868038 - MSTB LTR MaLR 0 426 55 2277 107 7 0 chr2 145388545 145388844 -107867739 - AluSx SINE Alu -8 304 4 2004 157 62 48 chr2 145388844 145388900 -107867683 - MSTB LTR MaLR -371 55 1 2044 131 44 0 chr2 145389367 145389664 -107866919 - AluSg SINE Alu 0 310 1 320 399 28 14 chr2 145389666 145389879 -107866704 + HAL1 LINE L1 450 665 -1842 377 244 0 26 chr2 145390297 145390412 -107866171 + HAL1 LINE L1 2311 2422 -85 1956 130 7 10 chr2 145390444 145390737 -107865846 + AluSx SINE Alu 11 302 -10 1943 168 0 9 chr2 145390848 145391163 -107865420 - AluJb SINE Alu 0 312 1 27 29 0 0 chr2 145391259 145391293 -107865290 + AT_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr2 145391329 145391351 -107865232 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr2 145391617 145391640 -107864943 + AT_rich Low_complexity Low_complexity 1 23 0 346 208 13 13 chr2 145392823 145392900 -107863683 - L1ME2 LINE L1 -19 6563 6487 3069 148 39 38 chr2 145392900 145393686 -107862897 + pTR5 LTR ERV1 6 2025 -413 312 214 0 36 chr2 145393686 145393770 -107862813 + LTR30 LTR ERV1 544 624 -98 2260 90 21 3 chr2 145393770 145394105 -107862478 + pTR5 LTR ERV1 52 392 -2046 1771 255 53 70 chr2 145394105 145394409 -107862174 - L1ME2 LINE L1 -92 6490 6182 1733 118 157 3 chr2 145394409 145394722 -107861861 - MER46B DNA MER2_type 0 236 1 1771 255 53 70 chr2 145394722 145394954 -107861629 - L1ME2 LINE L1 -400 6182 5948 2109 199 74 13 chr2 145394954 145395427 -107861156 + MLT1D LTR MaLR 1 502 -3 1771 255 53 70 chr2 145395427 145395773 -107860810 - L1ME2 LINE L1 -634 5948 5598 2247 108 3 0 chr2 145395773 145396078 -107860505 - AluSp SINE Alu -7 306 1 1771 255 53 70 chr2 145396078 145396186 -107860397 - L1ME2 LINE L1 -984 5598 5490 2285 107 3 0 chr2 145396186 145396495 -107860088 - AluSg SINE Alu 0 310 1 1771 255 53 70 chr2 145396495 145396655 -107859928 - L1ME2 LINE L1 -1092 5490 5365 5902 144 0 5 chr2 145396675 145398104 -107858479 - L1PB1 LINE L1 -36 6115 4694 1215 214 18 12 chr2 145398108 145398435 -107858148 + L1PB1 LINE L1 4356 4684 -1462 599 251 12 12 chr2 145398438 145398609 -107857974 - L1ME2 LINE L1 -1194 5370 5200 1426 272 60 63 chr2 145398804 145399830 -107856753 - L1ME2 LINE L1 -1887 4677 3656 451 267 8 8 chr2 145399823 145399954 -107856629 - L1ME2 LINE L1 -3475 3089 2959 * 1202 264 52 30 chr2 145400011 145400417 -107856166 - L1ME2 LINE L1 -5630 415 1 391 263 57 57 chr2 145400437 145400684 -107855899 - L1MDb LINE L1 -4535 2072 1826 25 51 0 0 chr2 145400732 145400771 -107855812 + AT_rich Low_complexity Low_complexity 1 39 0 891 125 7 7 chr2 145400853 145400989 -107855594 - MSTB1 LTR MaLR 0 432 297 494 103 0 0 chr2 145401003 145401071 -107855512 - MSTB LTR MaLR -358 68 1 324 274 79 15 chr2 145401071 145401350 -107855233 - L1MDb LINE L1 -4920 1506 1140 711 343 60 47 chr2 145401390 145402315 -107854268 - L1MDb LINE L1 -5422 1185 248 266 265 35 113 chr2 145402722 145402952 -107853631 - L1ME LINE L1 -5539 531 320 21 0 0 0 chr2 145403278 145403299 -107853284 + AT_rich Low_complexity Low_complexity 1 21 0 772 332 86 49 chr2 145403654 145403789 -107852794 - L2 LINE L2 -1 3312 3184 249 83 0 0 chr2 145403789 145403825 -107852758 + (CA)n Simple_repeat Simple_repeat 1 36 0 772 332 86 49 chr2 145403825 145403841 -107852742 - L2 LINE L2 -129 3184 3170 234 0 0 0 chr2 145403841 145403867 -107852716 + (TA)n Simple_repeat Simple_repeat 2 27 0 772 332 86 49 chr2 145403867 145404430 -107852153 - L2 LINE L2 -143 3170 2562 251 73 24 0 chr2 145404807 145404848 -107851735 + MADE1 DNA Mariner 2 43 -37 259 57 0 0 chr2 145404900 145404935 -107851648 + MADE1 DNA Mariner 27 61 -19 499 71 0 60 chr2 145404987 145405071 -107851512 + MADE1 DNA Mariner 2 80 0 646 307 28 0 chr2 145406523 145406699 -107849884 + MER5A DNA MER1_type 9 189 0 242 241 0 0 chr2 145406701 145406755 -107849828 - MER5A DNA MER1_type -93 96 43 1647 216 53 58 chr2 145406887 145407277 -107849306 + LTR24B LTR ERV1 1 378 -198 3017 61 0 0 chr2 145407277 145407653 -107848930 + L1PA7 LINE L1 5763 6138 -16 1647 216 53 58 chr2 145407653 145407845 -107848738 + LTR24B LTR ERV1 378 569 -7 2354 177 17 2 chr2 145409359 145409765 -107846818 - MSTC LTR MaLR 0 428 17 21 36 0 0 chr2 145410595 145410623 -107845960 + AT_rich Low_complexity Low_complexity 1 28 0 2386 166 16 26 chr2 145410647 145411070 -107845513 + MSTA LTR MaLR 1 419 -9 339 244 13 0 chr2 145411403 145411481 -107845102 - MER31A LTR ERV1 -399 86 8 334 306 66 23 chr2 145412724 145413130 -107843453 - L1ME LINE L1 -532 5630 5202 2139 119 20 3 chr2 145413288 145413582 -107843001 - AluSc SINE Alu -10 299 1 359 342 78 7 chr2 145413819 145414114 -107842469 - L1ME LINE L1 -2023 4123 3808 1855 123 60 3 chr2 145414307 145414591 -107841992 - AluSq SINE Alu -13 300 1 2222 106 0 10 chr2 145414611 145414913 -107841670 - AluSx SINE Alu -13 299 1 1516 165 62 109 chr2 145415128 145415595 -107840988 - MER65A LTR ERV1 0 445 1 1763 241 46 11 chr2 145415595 145416052 -107840531 - MER65A-int LTR ERV1 0 4871 4399 1462 231 72 13 chr2 145416081 145416470 -107840113 - MER65A-int LTR ERV1 -855 4016 3605 1333 225 44 16 chr2 145416621 145416985 -107839598 - MER65A-int LTR ERV1 -1529 3342 2969 521 251 74 26 chr2 145416978 145417255 -107839328 - MER65A-int LTR ERV1 -1497 5101 3087 * 498 246 95 35 chr2 145417249 145417528 -107839055 - MER65A-int LTR ERV1 -1902 3034 2493 * 1033 174 53 60 chr2 145417537 145417818 -107838765 - L1MA10 LINE L1 -13 6321 6043 1089 189 32 47 chr2 145417818 145418213 -107838370 - MER65A-int LTR ERV1 -2187 4144 3734 641 253 30 39 chr2 145418298 145418531 -107838052 - MER65A-int LTR ERV1 -2869 3729 3499 526 190 11 75 chr2 145418775 145418949 -107837634 - MER65A-int LTR ERV1 -3129 3469 3307 6429 228 59 49 chr2 145418976 145421121 -107835462 - MER65A-int LTR ERV1 -2696 2175 11 2588 147 7 33 chr2 145421127 145421584 -107834999 - MER65A LTR ERV1 0 445 1 1090 214 172 3 chr2 145422462 145422752 -107833831 - MER2 DNA MER2_type -1 344 6 257 333 0 0 chr2 145422863 145422932 -107833651 + polypyrimidine Low_complexity Low_complexity 4 72 0 214 420 51 11 chr2 145422990 145423166 -107833417 + MIR SINE MIR 6 188 -74 1837 147 0 10 chr2 145423610 145423975 -107832608 - AluJb SINE Alu 0 362 1 24 53 0 0 chr2 145424339 145424377 -107832206 + AT_rich Low_complexity Low_complexity 1 38 0 199 261 87 0 chr2 145426125 145426194 -107830389 - MIR SINE MIR -58 204 130 737 133 0 0 chr2 145426202 145426322 -107830261 - L1MA2 LINE L1 -2 6302 6183 6102 36 3 9 chr2 145426322 145427094 -107829489 + L1P LINE L1 1415 2181 -3965 25 83 0 0 chr2 145427605 145427665 -107828918 + AT_rich Low_complexity Low_complexity 1 60 0 221 373 63 8 chr2 145429471 145429597 -107826986 - L2 LINE L2 -2 3311 3179 500 300 13 0 chr2 145430294 145430444 -107826139 - L1MEc LINE L1 -6044 352 201 658 267 0 0 chr2 145430457 145430592 -107825991 + MER20 DNA MER1_type 84 218 -1 228 143 0 0 chr2 145432729 145432764 -107823819 + (TTTTC)n Simple_repeat Simple_repeat 5 39 0 488 116 12 0 chr2 145432767 145432853 -107823730 + (CTATT)n Simple_repeat Simple_repeat 4 90 0 1439 224 19 22 chr2 145433009 145433375 -107823208 - L1MB8 LINE L1 0 6178 5814 5467 166 30 14 chr2 145433397 145434071 -107822512 - L1MA4A LINE L1 -7 6998 6336 2220 91 3 0 chr2 145434071 145434369 -107822214 + AluY SINE Alu 1 299 -12 5467 166 30 14 chr2 145434369 145435411 -107821172 - L1MA4A LINE L1 -669 6336 5257 4594 198 73 7 chr2 145435407 145436528 -107820055 - L1MA4A LINE L1 -2513 4335 3141 * 7169 251 24 24 chr2 145436532 145438334 -107818249 - L1MA4A LINE L1 -5048 1801 1 2522 202 15 39 chr2 145438334 145439031 -107817552 - L1MB8 LINE L1 -341 5837 5170 4005 154 25 1 chr2 145439031 145439752 -107816831 - L1MA8 LINE L1 -1 6290 5553 2522 202 15 39 chr2 145439752 145439939 -107816644 - L1MB8 LINE L1 -1008 5170 4980 1540 65 0 56 chr2 145441502 145441716 -107814867 + AluY SINE Alu 89 290 -21 340 43 0 0 chr2 145441722 145441769 -107814814 + AluY SINE Alu 256 302 0 1107 181 172 8 chr2 145441859 145442097 -107814486 + MLT1A1 LTR MaLR 89 365 0 208 361 60 23 chr2 145443355 145443488 -107813095 - MER5A DNA MER1_type -49 140 3 22 0 0 0 chr2 145444219 145444241 -107812342 + AT_rich Low_complexity Low_complexity 1 22 0 28 29 0 0 chr2 145444636 145444671 -107811912 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr2 145444797 145444820 -107811763 + AT_rich Low_complexity Low_complexity 1 23 0 259 225 150 8 chr2 145445069 145445189 -107811394 - L1ME LINE L1 -297 5824 5688 230 218 73 0 chr2 145446110 145446165 -107810418 + MER94 DNA DNA 4 62 -72 2085 92 7 14 chr2 145446253 145446557 -107810026 + AluSx SINE Alu 4 305 0 2383 55 0 0 chr2 145446681 145446971 -107809612 - AluY SINE Alu -21 290 1 2025 202 60 48 chr2 145447429 145447925 -107808658 + MLT1D LTR MaLR 1 502 -3 389 246 29 6 chr2 145448049 145448224 -107808359 + (TA)n Simple_repeat Simple_repeat 2 180 0 26 0 0 0 chr2 145448668 145448694 -107807889 + AT_rich Low_complexity Low_complexity 1 26 0 1838 241 74 25 chr2 145449371 145449922 -107806661 - LTR48B LTR ERV1 -66 578 1 2615 238 22 22 chr2 145450533 145451221 -107805362 - MER76 LTR ERV 0 688 1 23 0 0 0 chr2 145451292 145451315 -107805268 + AT_rich Low_complexity Low_complexity 1 23 0 2230 103 0 3 chr2 145451938 145452238 -107804345 - AluSx SINE Alu -13 299 1 483 229 163 26 chr2 145453102 145453255 -107803328 + MER5B DNA MER1_type 5 178 0 2464 176 93 10 chr2 145453396 145453912 -107802671 - MER89 LTR ERV1 0 559 1 1143 196 9 0 chr2 145454655 145454880 -107801703 + L1MA9 LINE L1 3752 3978 -2168 * 4820 179 35 3 chr2 145454850 145455768 -107800815 + L1MA9 LINE L1 5362 6308 -4 351 171 114 34 chr2 145455949 145456037 -107800546 - MER58A DNA MER1_type 0 224 130 512 257 40 40 chr2 145456045 145456197 -107800386 - MER58A DNA MER1_type 0 156 5 240 35 0 0 chr2 145457326 145457355 -107799228 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 24 0 0 0 chr2 145457687 145457711 -107798872 + AT_rich Low_complexity Low_complexity 1 24 0 578 284 75 35 chr2 145458090 145458344 -107798239 + MLT1E LTR MaLR 1 264 -329 246 300 22 56 chr2 145458362 145458452 -107798131 - L2 LINE L2 -45 3268 3182 * 371 360 34 17 chr2 145458449 145458624 -107797959 + MIR SINE MIR 21 198 -64 396 277 75 32 chr2 145458857 145459045 -107797538 - LTR40b LTR ERVL -78 384 189 236 368 99 41 chr2 145459819 145460229 -107796354 - L2 LINE L2 -216 3056 2599 649 204 56 80 chr2 145460419 145460679 -107795904 + LTR12 LTR ERV1 207 453 -261 23 0 0 0 chr2 145461549 145461572 -107795011 + AT_rich Low_complexity Low_complexity 1 23 0 236 315 0 14 chr2 145461603 145461676 -107794907 - L2 LINE L2 -13 3300 3229 22 0 0 0 chr2 145461699 145461721 -107794862 + AT_rich Low_complexity Low_complexity 1 22 0 221 305 109 46 chr2 145461818 145461992 -107794591 - L2 LINE L2 -238 3034 2850 236 358 11 0 chr2 145462371 145462466 -107794117 - L2 LINE L2 -583 2731 2636 318 342 74 42 chr2 145462836 145463388 -107793195 - L2 LINE L2 -955 2359 1790 826 289 29 21 chr2 145464494 145464733 -107791850 - MLT1J LTR MaLR -61 450 210 2186 283 73 36 chr2 145464746 145467021 -107789562 - L1ME3A LINE L1 -10 6160 3804 22 0 0 0 chr2 145467450 145467472 -107789111 + AT_rich Low_complexity Low_complexity 1 22 0 644 91 10 20 chr2 145467701 145467800 -107788783 + MER4A LTR ERV1 1 98 -566 1461 157 162 90 chr2 145467800 145468177 -107788406 + MER4A LTR ERV1 261 664 0 1299 267 85 56 chr2 145468404 145468980 -107787603 + MLT1E LTR MaLR 1 593 0 21 36 0 0 chr2 145469216 145469244 -107787339 + AT_rich Low_complexity Low_complexity 1 28 0 25 65 0 0 chr2 145469802 145469848 -107786735 + AT_rich Low_complexity Low_complexity 1 46 0 5293 105 35 19 chr2 145470036 145471414 -107785169 - L1PA13 LINE L1 -11 6152 4758 355 355 46 14 chr2 145471444 145471661 -107784922 - L2 LINE L2 -1313 2001 1778 21 0 0 0 chr2 145472124 145472145 -107784438 + AT_rich Low_complexity Low_complexity 1 21 0 738 96 0 4 chr2 145472515 145472735 -107783848 - AluY SINE Alu 0 311 1 312 87 0 0 chr2 145472794 145472840 -107783743 - Tigger3(Golem) DNA MER2_type -406 2623 2578 234 351 131 16 chr2 145473205 145473396 -107783187 + MIR SINE MIR 50 262 0 5170 142 51 36 chr2 145473823 145474812 -107781771 - Tigger3b DNA MER2_type -1 1230 228 239 222 0 0 chr2 145475899 145475944 -107780639 + (TGGA)n Simple_repeat Simple_repeat 3 47 0 261 128 0 0 chr2 145476275 145476322 -107780261 + (GA)n Simple_repeat Simple_repeat 2 48 0 362 318 15 30 chr2 145476338 145476470 -107780113 - L2 LINE L2 -4 3268 3139 221 337 34 22 chr2 145476743 145476832 -107779751 - MIR SINE MIR -117 145 56 186 43 0 0 chr2 145477394 145477417 -107779166 + (GAAAA)n Simple_repeat Simple_repeat 1 23 0 256 310 241 0 chr2 145478511 145478669 -107777914 - MIR SINE MIR -14 248 53 3152 130 35 4 chr2 145478794 145479254 -107777329 + MER1A DNA MER1_type 55 528 -1 261 257 96 37 chr2 145479442 145479578 -107777005 - L1ME4a LINE L1 -19 6102 5959 31 58 0 0 chr2 145479848 145479900 -107776683 + AT_rich Low_complexity Low_complexity 1 52 0 1401 250 48 43 chr2 145480432 145480896 -107775687 - MLT1C LTR MaLR -1 466 1 855 295 103 26 chr2 145481060 145481450 -107775133 - MLT1H LTR MaLR 0 549 130 16245 190 23 5 chr2 145481489 145483232 -107773351 + L1PA14 LINE L1 1927 3636 -2525 201 39 0 0 chr2 145483232 145483258 -107773325 + (CAA)n Simple_repeat Simple_repeat 3 28 0 16245 190 23 5 chr2 145483258 145483952 -107772631 + L1PA14 LINE L1 3636 4316 -1845 210 71 0 0 chr2 145483952 145483980 -107772603 + (CA)n Simple_repeat Simple_repeat 2 29 0 16245 190 23 5 chr2 145483980 145485301 -107771282 + L1PA14 LINE L1 4316 5753 -408 10800 22 1 1 chr2 145485429 145487057 -107769526 - L1P1 LINE L1 -420 5735 4108 2263 126 14 6 chr2 145487157 145487522 -107769061 + L1PA14 LINE L1 5793 6160 -1 739 243 90 18 chr2 145487614 145487932 -107768651 - L1ME4a LINE L1 -747 5399 5084 2045 182 53 0 chr2 145487934 145488308 -107768275 + L1MC1 LINE L1 35 428 -5998 2716 226 68 48 chr2 145488310 145489046 -107767537 + MLT1A1-int LTR MaLR 280 1030 -705 1316 248 21 16 chr2 145489014 145489433 -107767150 + MLT1A1-int LTR MaLR 1238 1651 0 * 1299 230 24 38 chr2 145489433 145489802 -107766781 + MLT1A1 LTR MaLR 1 364 -1 5262 248 126 25 chr2 145489806 145491177 -107765406 + L1MC1 LINE L1 3789 5020 -1593 3368 185 29 5 chr2 145491177 145491838 -107764745 + L1PA16 LINE L1 5488 6164 -2 5262 248 126 25 chr2 145491838 145492018 -107764565 + L1MC1 LINE L1 5020 5180 -1433 186 71 0 0 chr2 145492018 145492046 -107764537 + (CAAAA)n Simple_repeat Simple_repeat 4 31 0 5262 248 126 25 chr2 145492046 145493057 -107763526 + L1MC1 LINE L1 5180 6613 0 370 191 24 143 chr2 145493056 145493224 -107763359 - L1ME3 LINE L1 -109 6055 5908 * 1666 255 66 58 chr2 145493231 145494429 -107762154 - L1MEc LINE L1 -1053 5487 1711 182 114 0 29 chr2 145494431 145494466 -107762117 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 369 62 0 0 chr2 145494701 145494749 -107761834 + (TG)n Simple_repeat Simple_repeat 2 49 0 586 247 67 6 chr2 145494912 145495090 -107761493 - L1MEc LINE L1 -5919 611 423 208 303 13 0 chr2 145496136 145496212 -107760371 + (TTCA)n Simple_repeat Simple_repeat 2 78 0 24 0 0 0 chr2 145496744 145496768 -107759815 + AT_rich Low_complexity Low_complexity 1 24 0 1508 221 52 0 chr2 145496824 145497205 -107759378 - L1MA9 LINE L1 -38 6274 5874 428 316 17 35 chr2 145498447 145498621 -107757962 - MIR3 SINE MIR 0 208 38 1783 120 71 7 chr2 145500009 145500292 -107756291 - AluSx SINE Alu 0 312 12 367 343 34 62 chr2 145500440 145500732 -107755851 + L2 LINE L2 2918 3201 -112 388 282 257 0 chr2 145501243 145501449 -107755134 - MLT1J LTR MaLR -15 496 238 314 259 42 70 chr2 145501649 145501792 -107754791 - L2 LINE L2 -44 3269 3131 2529 91 36 3 chr2 145502868 145503229 -107753354 + THE1C LTR MaLR 1 373 -2 183 308 19 0 chr2 145503367 145503419 -107753164 + MIR SINE MIR 84 136 -126 211 341 86 35 chr2 145503995 145504309 -107752274 + L2 LINE L2 1802 2131 -1183 231 289 221 0 chr2 145505496 145505600 -107750983 + L2 LINE L2 3179 3305 -8 248 308 41 50 chr2 145506609 145506793 -107749790 + L2 LINE L2 2771 2959 -313 424 234 139 7 chr2 145506952 145507089 -107749494 + MIR SINE MIR 57 211 -51 399 41 0 0 chr2 145508839 145508888 -107747695 + (CA)n Simple_repeat Simple_repeat 1 49 0 417 300 108 89 chr2 145508927 145509397 -107747186 - MLT1K LTR MaLR -108 480 2 252 300 91 55 chr2 145509481 145509591 -107746992 - MIR3 SINE MIR -81 127 14 1833 143 58 30 chr2 145509610 145509973 -107746610 - THE1C LTR MaLR -2 373 1 22 70 0 0 chr2 145511349 145511392 -107745191 + AT_rich Low_complexity Low_complexity 1 43 0 442 317 25 30 chr2 145511424 145511626 -107744957 + L1ME4a LINE L1 5634 5834 -287 433 276 144 45 chr2 145513770 145514034 -107742549 + MLT1I LTR MaLR 101 390 -19 231 241 15 98 chr2 145514550 145514683 -107741900 - MIR SINE MIR -21 241 120 198 71 0 0 chr2 145516439 145516467 -107740116 + (T)n Simple_repeat Simple_repeat 1 28 0 263 49 24 0 chr2 145516487 145516528 -107740055 + (TTTTA)n Simple_repeat Simple_repeat 4 45 0 1334 17 17 39 chr2 145516528 145516707 -107739876 - L1PA3 LINE L1 -13 6142 5968 765 298 40 16 chr2 145516763 145517085 -107739498 - L1M4 LINE L1 -1821 4325 3996 33296 43 1 2 chr2 145517240 145521363 -107735220 - L1P LINE L1 -2027 4119 1 22 0 0 0 chr2 145521836 145521858 -107734725 + AT_rich Low_complexity Low_complexity 1 22 0 1954 138 7 3 chr2 145521946 145522251 -107734332 + AluSx SINE Alu 1 306 -6 24 0 0 0 chr2 145522398 145522422 -107734161 + AT_rich Low_complexity Low_complexity 1 24 0 314 266 34 30 chr2 145522496 145522626 -107733957 + MIR SINE MIR 33 160 -65 209 286 0 14 chr2 145523129 145523199 -107733384 + (CATATA)n Simple_repeat Simple_repeat 3 71 0 * 239 324 10 10 chr2 145523156 145523258 -107733325 + (TA)n Simple_repeat Simple_repeat 1 102 0 2174 102 10 16 chr2 145523631 145523944 -107732639 - AluSp SINE Alu -2 311 1 384 223 29 39 chr2 145524095 145524198 -107732385 - LTR67 LTR ERVL -14 543 442 436 75 0 0 chr2 145524623 145524690 -107731893 - Alu SINE Alu 0 311 245 543 285 188 38 chr2 145525025 145525479 -107731104 - L2 LINE L2 0 3313 2790 242 259 0 0 chr2 145525479 145525533 -107731050 - MER5A DNA MER1_type 0 189 136 234 0 0 0 chr2 145525540 145525566 -107731017 + (T)n Simple_repeat Simple_repeat 1 26 0 1749 217 29 22 chr2 145525627 145526042 -107730541 + MER65A LTR ERV1 21 438 -7 8233 201 60 52 chr2 145526042 145528480 -107728103 + MER65A-int LTR ERV1 8 2466 -2405 622 231 36 20 chr2 145528712 145528907 -107727676 + MER65A-int LTR ERV1 1546 1743 -6377 8308 153 48 11 chr2 145528937 145529230 -107727353 - L1PBa LINE L1 -3785 3077 2796 315 0 0 0 chr2 145529230 145529265 -107727318 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2195 68 4 7 chr2 145529268 145529549 -107727034 - AluY SINE Alu -31 280 1 8308 153 48 11 chr2 145529549 145530873 -107725710 - L1PBa LINE L1 -4067 2795 1394 767 215 6 0 chr2 145530895 145531058 -107725525 - L1PBa LINE L1 -6694 169 6 5826 233 89 52 chr2 145531228 145533725 -107722858 + MER65A-int LTR ERV1 2805 4865 -6 2039 189 27 25 chr2 145533730 145534174 -107722409 + MER65A LTR ERV1 1 445 0 310 216 0 20 chr2 145534674 145534776 -107721807 + CT-rich Low_complexity Low_complexity 1 100 0 367 322 78 78 chr2 145534972 145535320 -107721263 - MLT2E LTR ERVL -280 348 1 10693 215 52 19 chr2 145535419 145537467 -107719116 - L1MA7 LINE L1 0 6495 4266 1935 149 7 0 chr2 145537467 145537763 -107718820 + AluSx SINE Alu 1 298 -14 10693 215 52 19 chr2 145537763 145539474 -107717109 - L1MA7 LINE L1 -2229 4266 2612 1356 114 0 5 chr2 145539474 145539713 -107716870 - AluY SINE Alu 0 329 92 2217 284 72 60 chr2 145539713 145541436 -107715147 - L1MA7 LINE L1 -4241 2110 672 1191 320 39 29 chr2 145541584 145542106 -107714477 - L1M3a LINE L1 -5242 713 11 2024 151 0 0 chr2 145542534 145542839 -107713744 + AluSg SINE Alu 1 305 -5 292 297 46 17 chr2 145543300 145543413 -107713170 + MER5A DNA MER1_type 39 163 -26 210 162 59 73 chr2 145543420 145543488 -107713095 + MER91C DNA MER1_type 17 83 -57 378 272 68 10 chr2 145543748 145543851 -107712732 + L2 LINE L2 3189 3297 -16 230 365 64 59 chr2 145543868 145544087 -107712496 - L2 LINE L2 -4 3268 3049 380 332 179 55 chr2 145544945 145545587 -107710996 - L2 LINE L2 -523 2791 2070 33 43 0 0 chr2 145546728 145546775 -107709808 + AT_rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr2 145546932 145546953 -107709630 + AT_rich Low_complexity Low_complexity 1 21 0 306 0 0 0 chr2 145547069 145547103 -107709480 + (CA)n Simple_repeat Simple_repeat 2 35 0 428 0 19 0 chr2 145547571 145547623 -107708960 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 339 362 59 50 chr2 145547640 145547980 -107708603 + L2 LINE L2 2971 3313 0 274 285 117 60 chr2 145548567 145549101 -107707482 + L1MCc LINE L1 23 581 -5842 6015 158 28 5 chr2 145549479 145551381 -107705202 + L1MA3 LINE L1 4291 6239 -66 375 313 88 0 chr2 145551411 145551571 -107705012 + L1MCc LINE L1 1168 1341 -5082 5416 207 16 30 chr2 145551603 145552399 -107704184 + L1 LINE L1 4010 4784 -1362 225 0 0 0 chr2 145552399 145552424 -107704159 + (CAA)n Simple_repeat Simple_repeat 2 26 0 5416 207 16 30 chr2 145552424 145552903 -107703680 + L1 LINE L1 4784 5268 -878 292 342 56 43 chr2 145553411 145553642 -107702941 + MIR SINE MIR 29 262 0 2128 202 37 5 chr2 145553796 145554001 -107702582 + MSTB LTR MaLR 4 201 -225 282 29 0 0 chr2 145554001 145554036 -107702547 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2128 202 37 5 chr2 145554036 145554240 -107702343 + MSTB LTR MaLR 201 426 0 8094 191 32 26 chr2 145554240 145555881 -107700702 + MSTB-int LTR MaLR 1 1651 0 2135 187 36 14 chr2 145555881 145556298 -107700285 + MSTB LTR MaLR 1 426 0 1557 326 103 51 chr2 145556919 145558262 -107698321 + L3 LINE CR1 141 1552 -25 452 115 0 13 chr2 145558359 145558437 -107698146 + (TTCC)n Simple_repeat Simple_repeat 3 79 0 1644 144 23 8 chr2 145558439 145558703 -107697880 - AluSx SINE Alu -44 268 1 23 68 0 0 chr2 145558709 145558753 -107697830 + AT_rich Low_complexity Low_complexity 1 44 0 1193 104 0 0 chr2 145559050 145559223 -107697360 - L1MA2 LINE L1 0 6304 6132 329 98 0 39 chr2 145559245 145559296 -107697287 + MER75 DNA T2_type 453 501 -3 1788 137 32 3 chr2 145559308 145559622 -107696961 - L1MA2 LINE L1 -175 6129 5807 27 29 0 0 chr2 145559857 145559891 -107696692 + AT_rich Low_complexity Low_complexity 1 34 0 1078 253 24 32 chr2 145560024 145560651 -107695932 + L1ME1 LINE L1 4728 5442 -720 4245 283 62 18 chr2 145560653 145560690 -107695893 + L1MEc LINE L1 36 70 -6326 5958 104 22 7 chr2 145560690 145562200 -107694383 + L1PA10 LINE L1 4645 6168 0 4245 283 62 18 chr2 145562200 145563793 -107692790 + L1MEc LINE L1 70 1737 -4659 493 311 101 20 chr2 145563800 145564048 -107692535 + L2 LINE L2 2889 3156 -157 415 206 21 0 chr2 145564075 145564172 -107692411 + L1ME3A LINE L1 6051 6149 -21 697 171 0 8 chr2 145564183 145564306 -107692277 + FLAM_C SINE Alu 10 131 -12 775 165 0 0 chr2 145564412 145564539 -107692044 + FLAM_C SINE Alu 1 127 -6 2157 258 48 28 chr2 145564741 145565463 -107691120 + L1ME1 LINE L1 5420 6156 -10 324 254 139 74 chr2 145566320 145566524 -107690059 + MIR SINE MIR 5 220 -42 364 319 126 46 chr2 145567299 145567537 -107689046 + MIR SINE MIR 3 259 -3 505 309 99 39 chr2 145568104 145568386 -107688197 - L2 LINE L2 -1 3312 3014 1071 314 118 11 chr2 145568567 145569093 -107687490 - L2 LINE L2 -443 2871 2290 256 331 146 17 chr2 145569383 145569561 -107687022 - MIR SINE MIR -16 246 46 21 0 0 0 chr2 145571667 145571688 -107684895 + AT_rich Low_complexity Low_complexity 1 21 0 272 181 28 0 chr2 145572130 145572202 -107684381 - L1ME4a LINE L1 -6 6115 6042 264 170 149 0 chr2 145572408 145572455 -107684128 - Tigger5 DNA MER2_type -2268 55 2 242 298 119 30 chr2 145572458 145572693 -107683890 - L1ME LINE L1 -294 5827 5572 30 27 0 0 chr2 145572715 145572752 -107683831 + AT_rich Low_complexity Low_complexity 1 37 0 264 364 149 19 chr2 145573538 145573915 -107682668 - L2 LINE L2 -213 3059 2624 728 218 28 0 chr2 145573925 145574067 -107682516 + MER106B DNA MER1_type 4 149 -910 30 69 0 0 chr2 145574102 145574160 -107682423 + AT_rich Low_complexity Low_complexity 1 58 0 1394 215 0 8 chr2 145574443 145574708 -107681875 + Tigger7 DNA MER2_type 1 263 -470 618 156 0 10 chr2 145574710 145574806 -107681777 + Tigger7 DNA MER2_type 2391 2485 -2 410 130 30 10 chr2 145575332 145575432 -107681151 + (TA)n Simple_repeat Simple_repeat 2 103 0 261 273 0 0 chr2 145575479 145575575 -107681008 + (TA)n Simple_repeat Simple_repeat 1 96 0 21 36 0 0 chr2 145575614 145575642 -107680941 + AT_rich Low_complexity Low_complexity 1 28 0 2469 130 41 14 chr2 145575751 145576167 -107680416 + MSTA LTR MaLR 2 428 0 8499 181 26 16 chr2 145576167 145577802 -107678781 + MSTA-int LTR MaLR 1 1651 0 2260 169 41 5 chr2 145577802 145578215 -107678368 + MSTA LTR MaLR 1 428 0 226 329 56 25 chr2 145578414 145578736 -107677847 - L1M4 LINE L1 -3435 2711 2380 * 911 260 71 67 chr2 145578735 145579152 -107677431 + L1ME3 LINE L1 5454 5883 -279 2119 125 10 3 chr2 145579413 145579718 -107676865 + AluSx SINE Alu 1 307 -5 239 304 96 59 chr2 145579797 145580287 -107676296 + L1 LINE L1 4029 4536 -1610 1492 211 37 8 chr2 145581604 145581955 -107674628 - MLT1A1 LTR MaLR 0 365 5 882 295 69 21 chr2 145582118 145582450 -107674133 + LTR16B LTR ERVL 103 450 -14 356 227 117 52 chr2 145583863 145584017 -107672566 + MIR SINE MIR 99 262 0 288 130 0 0 chr2 145584732 145584778 -107671805 + (TG)n Simple_repeat Simple_repeat 2 47 0 1401 225 26 24 chr2 145585310 145585688 -107670895 - L1MC2 LINE L1 -8 6336 5958 19359 174 34 15 chr2 145585725 145588926 -107667657 - L1MA2 LINE L1 0 7723 4584 1581 62 0 9 chr2 145588926 145589136 -107667447 + L1PA5 LINE L1 5945 6152 -2 19359 174 34 15 chr2 145589136 145593494 -107663089 - L1MA2 LINE L1 -3139 4584 8 2417 213 12 0 chr2 145593476 145593987 -107662596 - L1MC2 LINE L1 -370 5974 5458 * 225 0 0 0 chr2 145593989 145594014 -107662569 + (TG)n Simple_repeat Simple_repeat 2 26 0 4765 259 61 18 chr2 145594032 145595330 -107661253 - L1MC2 LINE L1 -1065 5081 3686 3049 165 134 46 chr2 145595330 145596089 -107660494 + LTR1B LTR ERV1 1 826 0 4765 259 61 18 chr2 145596089 145596548 -107660035 - L1MC2 LINE L1 -2460 3686 3248 238 195 37 37 chr2 145597936 145598018 -107658565 + A-rich Low_complexity Low_complexity 5 86 0 268 306 165 25 chr2 145598572 145598655 -107657928 + MER5B DNA MER1_type 33 140 -38 396 0 0 0 chr2 145598655 145598699 -107657884 + (CA)n Simple_repeat Simple_repeat 1 44 0 268 306 165 25 chr2 145598699 145598736 -107657847 + MER5B DNA MER1_type 140 170 -8 928 196 0 17 chr2 145598855 145599034 -107657549 - AluJb SINE Alu -2 310 135 4615 144 18 40 chr2 145599036 145599297 -107657286 - L1PB1 LINE L1 -126 6741 6476 591 112 0 0 chr2 145599297 145599386 -107657197 + (CA)n Simple_repeat Simple_repeat 2 90 0 4615 144 18 40 chr2 145599386 145600103 -107656480 - L1PB1 LINE L1 -391 6476 5785 329 197 0 0 chr2 145600103 145600169 -107656414 - MSTA LTR MaLR 0 428 363 3760 148 4 62 chr2 145600183 145600878 -107655705 - THE1C-int LTR MaLR -923 657 3 994 224 43 28 chr2 145600880 145601135 -107655448 - THE1C LTR MaLR 0 375 117 11467 152 44 17 chr2 145601135 145603964 -107652619 - L1PB1 LINE L1 -3044 3818 909 1043 184 0 10 chr2 145603970 145604166 -107652417 - L1PB1 LINE L1 -6669 194 1 1245 227 19 30 chr2 145604336 145604600 -107651983 + Tigger5 DNA MER2_type 1 261 -2062 * 2156 167 152 11 chr2 145604597 145605052 -107651531 + Tigger5 DNA MER2_type 1805 2323 0 7236 70 4 6 chr2 145607587 145608533 -107648050 - MER11C LTR ERVK 0 1071 128 5299 64 4 13 chr2 145608633 145609332 -107647251 - MER11C LTR ERVK -378 693 1 2156 108 0 3 chr2 145609671 145609980 -107646603 + AluSq SINE Alu 1 308 0 364 295 66 33 chr2 145610615 145610798 -107645785 - MIR SINE MIR 0 262 74 342 289 12 0 chr2 145613170 145613253 -107643330 + L2 LINE L2 3230 3313 0 262 302 123 0 chr2 145614684 145614790 -107641793 + L2 LINE L2 3192 3310 -3 2296 107 0 0 chr2 145616317 145616617 -107639966 + AluSx SINE Alu 1 300 -12 207 284 25 62 chr2 145617148 145617229 -107639354 + MIR3 SINE MIR 120 197 -11 245 241 0 0 chr2 145617756 145617810 -107638773 + CT-rich Low_complexity Low_complexity 2 55 0 213 182 0 0 chr2 145618268 145618301 -107638282 + polypurine Low_complexity Low_complexity 2 34 0 1851 168 0 3 chr2 145618631 145618928 -107637655 - AluJo SINE Alu -16 296 1 3912 186 19 22 chr2 145618931 145619712 -107636871 - L1MB5 LINE L1 -36 6138 5360 207 87 0 65 chr2 145620187 145620233 -107636350 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 544 195 6 29 chr2 145620654 145620828 -107635755 + CT-rich Low_complexity Low_complexity 3 172 0 1993 147 3 0 chr2 145622207 145622500 -107634083 - AluSx SINE Alu -18 294 1 393 228 0 11 chr2 145622693 145622785 -107633798 - L1MB5 LINE L1 -808 5366 5276 183 339 52 26 chr2 145622829 145622944 -107633639 - MIR SINE MIR -122 140 23 24 0 0 0 chr2 145623211 145623235 -107633348 + AT_rich Low_complexity Low_complexity 1 24 0 2198 62 22 4 chr2 145623267 145623578 -107633005 - AluY SINE Alu 0 317 2 26 0 0 0 chr2 145623635 145623661 -107632922 + AT_rich Low_complexity Low_complexity 1 26 0 952 213 0 29 chr2 145625185 145625392 -107631191 + MER3 DNA MER1_type 9 209 0 340 323 153 38 chr2 145626023 145626370 -107630213 + L1ME LINE L1 5336 5722 -2086 310 231 0 0 chr2 145626394 145626459 -107630124 + L1ME LINE L1 5657 5721 -400 399 298 56 39 chr2 145627474 145627652 -107628931 + L2 LINE L2 3133 3313 0 2105 82 41 27 chr2 145627857 145628149 -107628434 - AluY SINE Alu -15 296 1 768 212 180 98 chr2 145628275 145628765 -107627818 - MER34 LTR ERV1 -2 540 11 22 0 0 0 chr2 145629709 145629731 -107626852 + AT_rich Low_complexity Low_complexity 1 22 0 1165 214 71 6 chr2 145630148 145630484 -107626099 - LTR37A LTR ERV1 0 426 69 2590 10 0 0 chr2 145630697 145631060 -107625523 - AluYb8 SINE Alu 0 363 1 25 75 0 0 chr2 145631235 145631288 -107625295 + AT_rich Low_complexity Low_complexity 1 53 0 211 254 55 0 chr2 145631370 145631425 -107625158 - MER91C DNA MER1_type -50 90 33 701 288 128 39 chr2 145633151 145633533 -107623050 + L2 LINE L2 2897 3312 -1 1901 136 0 0 chr2 145634148 145634468 -107622115 - AluSg SINE Alu 0 320 1 1659 199 31 17 chr2 145634938 145635294 -107621289 - MLT1A1 LTR MaLR -2 363 3 207 0 0 0 chr2 145635404 145635427 -107621156 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 315 0 0 0 chr2 145635947 145635982 -107620601 + (TG)n Simple_repeat Simple_repeat 2 36 0 250 246 33 0 chr2 145636788 145636849 -107619734 - MIR SINE MIR -87 175 113 21 36 0 0 chr2 145637030 145637058 -107619525 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr2 145637457 145637486 -107619097 + AT_rich Low_complexity Low_complexity 1 29 0 378 108 0 0 chr2 145637892 145637957 -107618626 + (TG)n Simple_repeat Simple_repeat 2 66 0 1637 130 116 29 chr2 145639499 145639844 -107616739 - THE1C LTR MaLR 0 375 1 335 140 18 0 chr2 145640146 145640203 -107616380 + MLT2F LTR ERVL 6 63 -600 932 266 74 35 chr2 145640281 145640593 -107615990 + MLT2F LTR ERVL 238 561 -102 270 330 0 60 chr2 145641486 145641586 -107614997 + L2 LINE L2 3164 3257 -15 304 346 58 19 chr2 145641850 145642055 -107614528 - LTR33 LTR ERVL 0 521 309 24 67 0 0 chr2 145642423 145642468 -107614115 + AT_rich Low_complexity Low_complexity 1 45 0 960 184 50 0 chr2 145642857 145643036 -107613547 - MER5A DNA MER1_type -1 188 1 37 23 0 0 chr2 145643101 145643145 -107613438 + AT_rich Low_complexity Low_complexity 1 44 0 1519 203 77 21 chr2 145643233 145643608 -107612975 - MSTD LTR MaLR 0 396 1 214 191 0 0 chr2 145644260 145644302 -107612281 + A-rich Low_complexity Low_complexity 1 42 0 914 183 0 70 chr2 145644321 145644534 -107612049 + MER3 DNA MER1_type 1 198 -11 470 291 74 11 chr2 145645343 145645532 -107611051 - MIR SINE MIR -6 256 56 210 280 3 95 chr2 145645966 145646043 -107610540 + MIR SINE MIR 47 119 -89 689 216 6 0 chr2 145646163 145646334 -107610249 - L1MB7 LINE L1 -11 6173 6002 556 222 162 35 chr2 145647598 145647796 -107608787 - MER58A DNA MER1_type -1 223 1 341 240 75 20 chr2 145647796 145647942 -107608641 + L1 LINE L1 4965 5119 -1027 875 206 0 0 chr2 145647995 145648150 -107608433 + FRAM SINE Alu 1 155 -21 2042 186 0 6 chr2 145648187 145648525 -107608058 + MER1B DNA MER1_type 1 336 -1 636 294 0 9 chr2 145648572 145648786 -107607797 + L1MC/D LINE L1 5314 5525 -2283 666 271 35 48 chr2 145650511 145650778 -107605805 + MIR SINE MIR 5 251 -11 213 39 0 0 chr2 145651274 145651300 -107605283 + (A)n Simple_repeat Simple_repeat 1 26 0 24 0 0 0 chr2 145651401 145651425 -107605158 + AT_rich Low_complexity Low_complexity 1 24 0 247 395 193 0 chr2 145651783 145651897 -107604686 - MER91A DNA MER1_type -56 140 5 28 29 0 0 chr2 145651990 145652025 -107604558 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr2 145652034 145652059 -107604524 + AT_rich Low_complexity Low_complexity 1 25 0 11747 220 28 17 chr2 145652768 145657872 -107598711 - L1PA15-16 LINE L1 -2349 4500 13 24 32 0 0 chr2 145658083 145658114 -107598469 + AT_rich Low_complexity Low_complexity 1 31 0 9504 101 10 5 chr2 145658115 145660294 -107596289 - L1PA8 LINE L1 -9 6163 3971 18621 124 2 21 chr2 145660295 145663388 -107593195 + L1PA8 LINE L1 922 3955 -2191 594 263 58 12 chr2 145663388 145663559 -107593024 + MER58A DNA MER1_type 46 224 0 1387 229 8 0 chr2 145663660 145663922 -107592661 + Tigger7 DNA MER2_type 1 264 -2223 613 167 10 0 chr2 145663920 145664022 -107592561 + Tigger7 DNA MER2_type 2389 2491 0 * 21 0 0 0 chr2 145664502 145664523 -107592060 + AT_rich Low_complexity Low_complexity 1 21 0 216 268 9 18 chr2 145664541 145664653 -107591930 + (TA)n Simple_repeat Simple_repeat 2 112 0 435 254 95 18 chr2 145664832 145665001 -107591582 - MIR SINE MIR 0 262 81 446 300 97 5 chr2 145665075 145665465 -107591118 - L1ME LINE L1 -384 5780 5352 1414 200 3 63 chr2 145665713 145666013 -107590570 + AluJb SINE Alu 1 282 -30 26 30 0 0 chr2 145666013 145666046 -107590537 + AT_rich Low_complexity Low_complexity 1 33 0 1977 125 3 29 chr2 145666133 145666444 -107590139 + AluSx SINE Alu 1 303 -9 935 231 45 67 chr2 145666541 145666853 -107589730 + MLT1A1 LTR MaLR 19 323 -42 390 304 155 38 chr2 145666856 145667198 -107589385 - L1ME LINE L1 -1387 4759 4378 192 77 0 0 chr2 145668662 145668688 -107587895 + (A)n Simple_repeat Simple_repeat 1 26 0 2417 87 0 0 chr2 145670394 145670693 -107585890 - AluY SINE Alu -12 299 1 424 276 90 6 chr2 145670697 145670853 -107585730 + L2 LINE L2 1541 1709 -1605 721 169 0 16 chr2 145670859 145670978 -107585605 + FLAM_C SINE Alu 1 118 -21 306 50 0 0 chr2 145670978 145671018 -107585565 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 1729 285 151 24 chr2 145671030 145671599 -107584984 + L2 LINE L2 1719 2435 -879 2285 101 7 0 chr2 145671599 145671896 -107584687 - AluSg SINE Alu -11 299 1 1729 285 151 24 chr2 145671896 145672189 -107584394 + L2 LINE L2 2435 2690 -624 481 303 12 31 chr2 145672190 145672352 -107584231 - LTR16A LTR ERVL -59 391 233 1259 127 38 25 chr2 145672358 145672594 -107583989 + AluSp SINE Alu 56 294 -19 261 324 28 42 chr2 145672963 145673105 -107583478 - LTR16A LTR ERVL -259 191 52 7410 209 39 7 chr2 145673264 145674744 -107581839 - MSTA-int LTR MaLR -123 1528 1 2118 189 36 0 chr2 145674744 145675157 -107581426 - MSTA LTR MaLR 0 428 1 282 258 15 0 chr2 145675327 145675393 -107581190 - MER83A-int LTR ERV1 -38 5908 5842 387 346 55 32 chr2 145675519 145675953 -107580630 - MER83A-int LTR ERV1 -253 6423 5980 375 312 38 45 chr2 145676514 145676806 -107579777 - MER83A-int LTR ERV1 -2135 4987 4698 326 318 90 50 chr2 145677441 145677865 -107578718 - MER83A-int LTR ERV1 -2478 4613 4173 314 170 0 0 chr2 145678459 145678512 -107578071 - MER83A-int LTR ERV1 -3839 2837 2785 839 204 90 53 chr2 145679479 145679970 -107576613 - MER83A-int LTR ERV1 -2528 4148 1720 1469 177 43 20 chr2 145680782 145681081 -107575502 + AluJb SINE Alu 1 306 -6 4128 163 55 60 chr2 145681378 145682200 -107574383 - MER83A-int LTR ERV1 -6418 1702 885 231 103 0 0 chr2 145682200 145682239 -107574344 + (CA)n Simple_repeat Simple_repeat 2 40 0 4128 163 55 60 chr2 145682239 145682446 -107574137 - MER83A-int LTR ERV1 -7235 885 678 1306 130 4 57 chr2 145682420 145682666 -107573917 - MER83A-int LTR ERV1 -2344 1941 1709 * 25 31 0 0 chr2 145683394 145683426 -107573157 + AT_rich Low_complexity Low_complexity 1 32 0 409 336 60 8 chr2 145683440 145683675 -107572908 - MER41B LTR ERV1 -205 430 184 5497 72 5 35 chr2 145684709 145685171 -107571412 + MER4E LTR ERV1 1 431 -335 2095 112 3 7 chr2 145685171 145685466 -107571117 - AluSg SINE Alu -16 294 1 5497 72 5 35 chr2 145685466 145685793 -107570790 + MER4E LTR ERV1 431 766 0 205 359 0 0 chr2 145686206 145686284 -107570299 - L3b LINE CR1 -208 1375 1298 2229 105 0 3 chr2 145687179 145687473 -107569110 + AluSq SINE Alu 1 293 -20 210 37 0 0 chr2 145688153 145688180 -107568403 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 307 242 55 0 chr2 145688193 145688284 -107568299 + L1MEc LINE L1 120 215 -6181 451 268 92 14 chr2 145688325 145688467 -107568116 + MIR SINE MIR 109 261 -1 399 197 71 16 chr2 145688526 145688653 -107567930 - LTR54B LTR ERV1 0 498 365 * 759 200 160 22 chr2 145688652 145688877 -107567706 - LTR54B LTR ERV1 -242 256 1 21 71 0 0 chr2 145688883 145688925 -107567658 + AT_rich Low_complexity Low_complexity 1 42 0 300 214 0 117 chr2 145689645 145689748 -107566835 + L1MC4 LINE L1 6614 6704 -1338 317 271 0 31 chr2 145689766 145689862 -107566721 + L1MC4 LINE L1 6611 6703 -1339 2102 117 10 7 chr2 145689863 145690162 -107566421 - AluSx SINE Alu -12 300 1 382 354 51 22 chr2 145690308 145690486 -107566097 + MIR3 SINE MIR 20 202 -6 1660 197 101 17 chr2 145691619 145691852 -107564731 - MER50 LTR ERV1 0 734 522 1875 48 0 26 chr2 145691852 145692083 -107564500 - AluY SINE Alu -10 301 77 1660 197 101 17 chr2 145692083 145692266 -107564317 - MER50 LTR ERV1 -212 522 283 1535 172 4 11 chr2 145692376 145692643 -107563940 - AluSx SINE Alu -41 271 7 714 234 19 7 chr2 145692729 145692883 -107563700 - MER50 LTR ERV1 -568 166 11 1537 183 7 18 chr2 145693277 145693562 -107563021 - AluJb SINE Alu -30 282 1 791 152 15 23 chr2 145693787 145693919 -107562664 + FLAM_C SINE Alu 1 131 -2 292 247 11 0 chr2 145694007 145694096 -107562487 - LTR37A LTR ERV1 -55 371 282 1871 168 89 13 chr2 145694234 145694627 -107561956 + LTR29 LTR ERV1 160 582 -40 1314 202 5 11 chr2 145694738 145695097 -107561486 - L1MB8 LINE L1 -170 6008 5560 27 92 0 0 chr2 145695479 145695555 -107561028 + AT_rich Low_complexity Low_complexity 1 76 0 24 32 0 0 chr2 145695735 145695766 -107560817 + AT_rich Low_complexity Low_complexity 1 31 0 2547 71 0 0 chr2 145696225 145696536 -107560047 + AluY SINE Alu 1 311 0 552 281 84 15 chr2 145696612 145696815 -107559768 + MIR SINE MIR 1 217 -45 * 803 230 7 0 chr2 145696809 145696957 -107559626 + MER5B DNA MER1_type 28 176 -2 631 149 7 26 chr2 145697220 145697374 -107559209 + GA-rich Low_complexity Low_complexity 2 152 0 2695 160 7 113 chr2 145697605 145697728 -107558855 - MER41C LTR ERV1 0 554 419 2211 116 0 6 chr2 145697728 145698039 -107558544 + AluSc SINE Alu 1 309 0 2695 160 7 113 chr2 145698039 145698307 -107558276 - MER41C LTR ERV1 -135 419 250 1495 143 0 0 chr2 145698307 145698531 -107558052 - AluSg/x SINE Alu -5 305 82 2695 160 7 113 chr2 145698531 145698757 -107557826 - MER41C LTR ERV1 -304 250 2 220 162 0 0 chr2 145698844 145698881 -107557702 - MIR SINE MIR -161 101 65 468 335 89 63 chr2 145698906 145699458 -107557125 + L2 LINE L2 1819 2384 -930 363 357 42 12 chr2 145699466 145699634 -107556949 + L2 LINE L2 2583 2755 -559 194 293 333 0 chr2 145699696 145699795 -107556788 - L2 LINE L2 0 3313 3182 398 329 37 81 chr2 145700003 145700413 -107556170 + L2 LINE L2 2884 3275 -38 2137 121 0 0 chr2 145700800 145701089 -107555494 + AluSx SINE Alu 7 295 -17 2248 73 7 3 chr2 145701091 145701393 -107555190 + AluY SINE Alu 1 303 -8 539 236 0 106 chr2 145701569 145701768 -107554815 - MER5B DNA MER1_type 0 178 1 413 346 37 0 chr2 145702322 145702484 -107554099 - MIR SINE MIR -49 213 46 198 91 0 0 chr2 145703836 145703869 -107552714 + (A)n Simple_repeat Simple_repeat 1 33 0 227 321 30 22 chr2 145704718 145704852 -107551731 + L2 LINE L2 2353 2487 -827 198 359 22 11 chr2 145705012 145705104 -107551479 + MIR SINE MIR 56 148 -114 22 35 0 0 chr2 145705108 145705137 -107551446 + AT_rich Low_complexity Low_complexity 1 29 0 2210 181 68 15 chr2 145705148 145705606 -107550977 + MER31A LTR ERV1 1 482 -3 3075 110 22 4 chr2 145705636 145706091 -107550492 + MER4C LTR ERV1 3 465 0 1220 133 61 38 chr2 145706103 145706509 -107550074 + MER4C-int LTR ERV1 9 563 -6035 186 103 0 0 chr2 145706513 145706542 -107550041 + (TTG)n Simple_repeat Simple_repeat 1 29 0 363 170 0 6 chr2 145706543 145706652 -107549931 + MER4C-int LTR ERV1 639 812 -5786 261 0 0 0 chr2 145706667 145706696 -107549887 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1696 216 48 51 chr2 145706722 145707157 -107549426 + MER4C-int LTR ERV1 1838 2271 -4060 408 166 16 21 chr2 145707161 145707255 -107549328 + MER4C-int LTR ERV1 845 2732 -3214 315 130 0 19 chr2 145707271 145707324 -107549259 + MER34C LTR ERV1 160 211 -374 2270 127 38 3 chr2 145707324 145707670 -107548913 - THE1B LTR MaLR 0 364 7 1927 156 79 51 chr2 145707790 145708347 -107548236 + MER4C-int LTR ERV1 1840 3024 -3734 5783 160 46 49 chr2 145708348 145710744 -107545839 + MER4C-int LTR ERV1 786 4625 -1973 2096 167 3 3 chr2 145710744 145711080 -107545503 + MER1B DNA MER1_type 2 337 0 5783 160 46 49 chr2 145711080 145711320 -107545263 + MER4C-int LTR ERV1 4625 4864 -1734 2350 85 7 7 chr2 145711378 145711684 -107544899 + AluSq SINE Alu 2 307 -6 5317 169 40 52 chr2 145711688 145712955 -107543628 + MER4C-int LTR ERV1 5347 6597 -1 2850 111 38 7 chr2 145712959 145713410 -107543173 + MER4C LTR ERV1 1 465 0 615 270 59 20 chr2 145713524 145713728 -107542855 - MIR SINE MIR -2 260 49 216 222 28 28 chr2 145714044 145714152 -107542431 + (TA)n Simple_repeat Simple_repeat 2 109 0 347 274 61 20 chr2 145714160 145714181 -107542402 - L1ME1 LINE L1 -234 5932 5912 1214 287 43 18 chr2 145714181 145714798 -107541785 - L1MA6 LINE L1 -387 5913 5257 1305 142 24 0 chr2 145715015 145715227 -107541356 - L1PA16 LINE L1 -9 6157 5941 298 167 0 0 chr2 145715301 145715343 -107541240 - 5S rRNA rRNA -79 42 1 24 0 0 0 chr2 145715766 145715790 -107540793 + AT_rich Low_complexity Low_complexity 1 24 0 2494 136 31 9 chr2 145716094 145716513 -107540070 - MSTA LTR MaLR 0 428 1 600 238 0 8 chr2 145716550 145716672 -107539911 - FLAM_A SINE Alu -12 121 1 1963 248 74 44 chr2 145716702 145718210 -107538373 - L1ME2 LINE L1 -208 6236 4686 333 279 91 5 chr2 145718224 145718421 -107538162 - L1ME2 LINE L1 -4923 1684 1471 * 461 254 52 52 chr2 145718416 145718747 -107537836 - L1ME2 LINE L1 -4905 1511 1274 1370 188 21 3 chr2 145718994 145719082 -107537501 - L1MC2 LINE L1 -11 6333 6248 330 67 0 0 chr2 145719082 145719127 -107537456 + (CA)n Simple_repeat Simple_repeat 1 45 0 1370 188 21 3 chr2 145719127 145719325 -107537258 - L1MC2 LINE L1 -96 6248 6042 232 209 11 44 chr2 145719430 145719521 -107537062 + C-rich Low_complexity Low_complexity 2 89 0 547 216 70 18 chr2 145719681 145719852 -107536731 - L1MC1 LINE L1 -227 6106 5927 1699 216 153 40 chr2 145719860 145720388 -107536195 - L1ME2 LINE L1 -5817 609 22 206 356 26 0 chr2 145721726 145721841 -107534742 + L3b LINE CR1 1102 1219 -364 275 351 30 54 chr2 145722018 145722186 -107534397 + MIR SINE MIR 3 166 -96 426 189 48 200 chr2 145722431 145722701 -107533882 - MIR SINE MIR 0 262 34 2047 108 0 11 chr2 145724311 145724597 -107531986 - AluSc SINE Alu -26 283 1 421 348 24 36 chr2 145724935 145725042 -107531541 - MIR SINE MIR -5 257 150 4369 129 7 13 chr2 145725042 145725737 -107530846 + LTR8 LTR ERV1 1 691 0 421 348 24 36 chr2 145725737 145725882 -107530701 - MIR SINE MIR -112 150 8 2041 161 22 39 chr2 145726011 145726421 -107530162 + MER57A LTR ERV1 1 403 0 2011 139 3 0 chr2 145726680 145726975 -107529608 + AluSq SINE Alu 1 296 -17 4868 86 148 4 chr2 145726988 145727710 -107528873 + LTR12 LTR ERV1 1 826 0 230 324 128 0 chr2 145729695 145729797 -107526786 - MIR SINE MIR -78 184 70 3076 166 40 66 chr2 145729797 145730567 -107526016 + LTR1B LTR ERV1 1 785 0 307 191 112 84 chr2 145730749 145730933 -107525650 + LTR38 LTR ERV1 90 327 -283 500 242 55 50 chr2 145730960 145731179 -107525404 + LTR36 LTR ERV1 392 611 0 2114 110 7 0 chr2 145731469 145731769 -107524814 + AluSp SINE Alu 1 302 -11 348 24 0 0 chr2 145731863 145731904 -107524679 + (CA)n Simple_repeat Simple_repeat 2 42 0 330 321 8 8 chr2 145731925 145732056 -107524527 + Charlie8 DNA MER1_type 78 208 -2209 247 265 130 34 chr2 145732279 145732517 -107524066 - HAL1 LINE L1 -424 2083 1823 977 236 113 82 chr2 145732775 145733388 -107523195 - HAL1 LINE L1 -701 1806 1175 1286 256 87 28 chr2 145733388 145733861 -107522722 - MLT1H1 LTR MaLR 0 555 55 295 233 133 0 chr2 145733846 145733936 -107522647 - MLT1H1 LTR MaLR -312 243 142 * 1609 209 74 6 chr2 145734011 145734361 -107522222 - MLT1A2 LTR MaLR 0 374 1 318 232 36 18 chr2 145734544 145734656 -107521927 - L1M4 LINE L1 -6358 184 71 402 280 56 8 chr2 145734966 145735091 -107521492 - MLT1H1 LTR MaLR -424 131 1 294 271 62 52 chr2 145735091 145735301 -107521282 - HAL1 LINE L1 -1328 1179 968 294 214 0 0 chr2 145735307 145735391 -107521192 + (TA)n Simple_repeat Simple_repeat 1 84 0 6725 117 20 7 chr2 145735482 145736684 -107519899 - L1MA1 LINE L1 -2 7719 6502 * 7574 210 21 23 chr2 145736667 145737560 -107519023 - L1MA1 LINE L1 -1449 6116 5223 2304 143 28 0 chr2 145737560 145737924 -107518659 + THE1C LTR MaLR 1 374 -1 7574 210 21 23 chr2 145737924 145739649 -107516934 - L1MA1 LINE L1 -2342 5223 3570 522 141 0 0 chr2 145739654 145739774 -107516809 - AluSg/x SINE Alu 0 324 205 234 147 0 0 chr2 145739776 145739810 -107516773 - Alu SINE Alu -262 40 7 17041 175 69 18 chr2 145739815 145740216 -107516367 - L1MA1 LINE L1 -3989 3576 3197 1707 189 10 0 chr2 145740216 145740522 -107516061 + AluSq SINE Alu 1 309 -4 17041 175 69 18 chr2 145740522 145741110 -107515473 - L1MA1 LINE L1 -4368 3197 2641 1946 112 0 0 chr2 145741110 145741368 -107515215 - AluSg SINE Alu -9 301 44 17041 175 69 18 chr2 145741368 145743756 -107512827 - L1MA1 LINE L1 -4924 2641 24 402 327 153 34 chr2 145743792 145744171 -107512412 - HAL1 LINE L1 -1655 852 429 913 296 84 3 chr2 145744196 145744517 -107512066 - HAL1 LINE L1 -2153 354 8 431 284 103 61 chr2 145744884 145745290 -107511293 - L1MDa LINE L1 -1537 5003 4570 295 245 198 0 chr2 145745326 145745432 -107511151 - L1MDa LINE L1 -2073 4467 4341 307 309 69 36 chr2 145745584 145745917 -107510666 - L1MDa LINE L1 -2375 4165 3822 386 329 128 18 chr2 145746167 145746592 -107509991 - L1MDa LINE L1 -861 2040 1696 787 259 129 58 chr2 145746702 145747181 -107509402 - LTR36 LTR ERV1 -9 602 90 266 233 58 42 chr2 145747233 145747353 -107509230 - L1MDa LINE L1 -5061 1469 1348 226 361 46 61 chr2 145747370 145747830 -107508753 - L1MDa LINE L1 -5649 881 429 1646 127 0 4 chr2 145747937 145748182 -107508401 - AluSg1 SINE Alu -10 299 56 1858 124 0 4 chr2 145748282 145748555 -107508028 + AluSg SINE Alu 32 303 -7 265 146 10 83 chr2 145748633 145748729 -107507854 + (TTATA)n Simple_repeat Simple_repeat 1 89 0 629 209 0 50 chr2 145748841 145748980 -107507603 + FLAM_C SINE Alu 2 133 0 770 11 21 0 chr2 145750002 145750096 -107506487 + (GAAA)n Simple_repeat Simple_repeat 1 96 0 223 317 0 0 chr2 145751248 145751308 -107505275 + L2 LINE L2 3204 3263 -9 182 171 24 0 chr2 145751310 145751351 -107505232 + GA-rich Low_complexity Low_complexity 1 42 0 180 0 0 0 chr2 145751976 145751996 -107504587 + (TA)n Simple_repeat Simple_repeat 2 21 0 1139 201 25 104 chr2 145754137 145754313 -107502270 + MLT1A2 LTR MaLR 3 131 -243 1535 151 6 82 chr2 145754313 145754632 -107501951 + AluJo SINE Alu 3 297 -15 1139 201 25 104 chr2 145754632 145754859 -107501724 + MLT1A2 LTR MaLR 131 374 0 710 262 50 31 chr2 145754884 145755322 -107501261 - MLT1H1 LTR MaLR -24 531 6 207 368 0 0 chr2 145755469 145755526 -107501057 + L2 LINE L2 3210 3266 -6 25 75 0 0 chr2 145755526 145755579 -107501004 + AT_rich Low_complexity Low_complexity 1 53 0 419 268 18 121 chr2 145755640 145755864 -107500719 - MER63A DNA MER1_type -1 209 9 2156 122 0 0 chr2 145756038 145756342 -107500241 + AluSx SINE Alu 1 304 -8 23 33 0 0 chr2 145757999 145758029 -107498554 + AT_rich Low_complexity Low_complexity 1 30 0 296 247 0 0 chr2 145759171 145759244 -107497339 + L1MC5 LINE L1 7833 7905 -56 762 256 45 56 chr2 145759648 145760023 -107496560 + L1MC4 LINE L1 7507 7877 -165 324 326 33 0 chr2 145761513 145761605 -107494978 + MER91A DNA MER1_type 102 196 0 1861 221 44 3 chr2 145761715 145762100 -107494483 + MER45B DNA AcHobo 1 401 -639 2378 131 3 0 chr2 145763062 145763429 -107493154 - L1PA13 LINE L1 -1 6162 5795 445 359 45 0 chr2 145763441 145763639 -107492944 + MIR SINE MIR 53 259 -3 282 29 0 0 chr2 145764010 145764045 -107492538 + (GA)n Simple_repeat Simple_repeat 2 36 0 231 88 0 0 chr2 145764350 145764384 -107492199 + (TTCC)n Simple_repeat Simple_repeat 3 36 0 210 357 78 75 chr2 145764395 145764689 -107491894 - L2 LINE L2 -43 3229 2935 21 0 0 0 chr2 145765276 145765297 -107491286 + AT_rich Low_complexity Low_complexity 1 21 0 510 283 57 30 chr2 145765435 145765665 -107490918 + LTR52 LTR ERVL 1 236 -185 505 198 137 39 chr2 145766262 145766444 -107490139 - L1MB7 LINE L1 -3 6181 5982 1460 162 19 8 chr2 145766478 145766744 -107489839 - L1MB7 LINE L1 -281 5897 5629 515 210 8 25 chr2 145766733 145766852 -107489731 + L1MB7 LINE L1 5505 5621 -563 * 21 57 0 0 chr2 145766874 145766909 -107489674 + AT_rich Low_complexity Low_complexity 1 35 0 260 255 0 0 chr2 145766948 145766999 -107489584 + (TCCA)n Simple_repeat Simple_repeat 1 51 0 1801 189 127 0 chr2 145767091 145767462 -107489121 - MSTB LTR MaLR -8 418 1 1406 213 41 44 chr2 145767643 145768032 -107488551 - MLT1B LTR MaLR -2 388 1 1027 207 59 0 chr2 145770211 145770414 -107486169 + MER58A DNA MER1_type 7 221 -3 710 145 130 0 chr2 145771876 145772014 -107484569 - MER96B DNA MER1_type? -242 175 20 1936 65 80 7 chr2 145772557 145772832 -107483751 - AluY SINE Alu -16 295 1 1256 244 70 48 chr2 145775317 145775849 -107480734 - MER39 LTR ERV1 -1 706 1 1096 253 64 50 chr2 145775983 145776421 -107480162 + MLT1G LTR MaLR 1 444 -146 297 197 45 0 chr2 145778289 145778355 -107478228 - MER92C LTR ERV1 -2 552 484 192 346 103 0 chr2 145779682 145779760 -107476823 - MIR SINE MIR -74 134 49 23 68 0 0 chr2 145779972 145780016 -107476567 + AT_rich Low_complexity Low_complexity 1 44 0 21 36 0 0 chr2 145780239 145780267 -107476316 + AT_rich Low_complexity Low_complexity 1 28 0 29 28 0 0 chr2 145780546 145780582 -107476001 + AT_rich Low_complexity Low_complexity 1 36 0 305 388 31 12 chr2 145780810 145781065 -107475518 - L2 LINE L2 -492 2822 2563 207 69 0 0 chr2 145781968 145781997 -107474586 + (TAAAAA)n Simple_repeat Simple_repeat 2 30 0 27 0 0 0 chr2 145782595 145782622 -107473961 + AT_rich Low_complexity Low_complexity 1 27 0 589 266 133 26 chr2 145782725 145782951 -107473632 + MIR SINE MIR 13 262 0 371 314 8 16 chr2 145783070 145783191 -107473392 + L2 LINE L2 3190 3309 -4 2359 93 7 0 chr2 145784478 145784788 -107471795 - AluSx SINE Alu 0 312 1 502 364 17 6 chr2 145785185 145785361 -107471222 - MER5B DNA MER1_type 0 178 1 1260 214 91 9 chr2 145785465 145785783 -107470800 - MER2 DNA MER2_type 0 344 1 332 252 61 27 chr2 145786291 145786438 -107470145 - MER103 DNA DNA -6 160 9 821 249 88 88 chr2 145786668 145787201 -107469382 - MER34 LTR ERV1 0 542 10 213 138 35 17 chr2 145787220 145787278 -107469305 + (TA)n Simple_repeat Simple_repeat 1 59 0 218 390 93 6 chr2 145787326 145787508 -107469075 - MIR SINE MIR -56 206 9 23 33 0 0 chr2 145787636 145787666 -107468917 + AT_rich Low_complexity Low_complexity 1 30 0 31 0 0 0 chr2 145788408 145788439 -107468144 + AT_rich Low_complexity Low_complexity 1 31 0 588 29 0 0 chr2 145789133 145789203 -107467380 + (TG)n Simple_repeat Simple_repeat 2 71 0 627 341 148 26 chr2 145789537 145789797 -107466786 - L2 LINE L2 -2400 914 687 1829 175 35 55 chr2 145789797 145790198 -107466385 + MSTD LTR MaLR 1 393 -3 2081 139 55 0 chr2 145790198 145790543 -107466040 - THE1B LTR MaLR 0 364 1 627 341 148 26 chr2 145790543 145790976 -107465607 - L2 LINE L2 -2626 688 135 23 68 0 0 chr2 145791284 145791328 -107465255 + AT_rich Low_complexity Low_complexity 1 44 0 570 328 39 0 chr2 145791553 145791733 -107464850 + MER5A DNA MER1_type 3 189 0 23 68 0 0 chr2 145792565 145792609 -107463974 + AT_rich Low_complexity Low_complexity 1 44 0 222 245 20 0 chr2 145793169 145793218 -107463365 + MIR SINE MIR 105 154 -108 389 348 54 18 chr2 145793995 145794219 -107462364 - MIR SINE MIR -11 251 20 387 380 19 0 chr2 145796698 145796856 -107459727 - L3b LINE CR1 -119 1464 1304 638 194 163 0 chr2 145799349 145799509 -107457074 - MER5A DNA MER1_type 0 189 4 237 362 93 16 chr2 145801443 145801700 -107454883 - L2 LINE L2 -995 2319 2043 1975 233 39 22 chr2 145801770 145802234 -107454349 + MER70B LTR ERVL 5 476 -102 227 125 0 0 chr2 145802232 145802264 -107454319 + MER70A LTR ERVL 441 472 0 * 331 347 114 75 chr2 145802288 145802300 -107454283 - L2 LINE L2 -10 3262 3252 2564 55 0 0 chr2 145802300 145802608 -107453975 + AluY SINE Alu 1 308 -3 331 347 114 75 chr2 145802608 145802981 -107453602 - L2 LINE L2 -20 3252 2862 699 312 121 23 chr2 145802999 145803429 -107453154 + L2 LINE L2 1937 2408 -906 21 57 0 0 chr2 145804591 145804626 -107451957 + AT_rich Low_complexity Low_complexity 1 35 0 180 327 106 39 chr2 145804627 145804731 -107451852 + MIR SINE MIR 33 143 -119 214 154 51 0 chr2 145804776 145804815 -107451768 + (CATATA)n Simple_repeat Simple_repeat 5 45 0 324 244 104 74 chr2 145805004 145805033 -107451550 - MLT1G1 LTR MaLR -9 586 559 2003 101 10 34 chr2 145805033 145805330 -107451253 + AluSc SINE Alu 1 290 -19 324 244 104 74 chr2 145805330 145805435 -107451148 - MLT1G1 LTR MaLR -36 559 448 1883 121 31 64 chr2 145805490 145805878 -107450705 + THE1C LTR MaLR 1 375 0 1684 125 3 1 chr2 145805878 145806231 -107450352 + THE1C-int LTR MaLR 1 375 0 709 264 25 93 chr2 145806238 145806589 -107449994 - MLT1G1 LTR MaLR -224 371 1 23 33 0 0 chr2 145807425 145807455 -107449128 + AT_rich Low_complexity Low_complexity 1 30 0 805 264 29 5 chr2 145808417 145808625 -107447958 + MER58A DNA MER1_type 4 216 -8 2091 118 10 0 chr2 145808784 145809090 -107447493 - AluSc SINE Alu 0 309 1 23 0 0 0 chr2 145809702 145809725 -107446858 + AT_rich Low_complexity Low_complexity 1 23 0 1360 234 0 32 chr2 145810016 145810324 -107446259 + AluJo SINE Alu 1 298 -14 227 326 83 15 chr2 145810378 145810510 -107446073 + MIR SINE MIR 122 262 0 22 56 0 0 chr2 145810573 145810609 -107445974 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr2 145810624 145810645 -107445938 + AT_rich Low_complexity Low_complexity 1 21 0 216 284 103 99 chr2 145810810 145810889 -107445694 - MIR SINE MIR 0 262 185 1559 210 0 7 chr2 145810889 145811189 -107445394 - AluJb SINE Alu -12 300 3 216 284 103 99 chr2 145811189 145811352 -107445231 - MIR SINE MIR -77 185 19 296 335 71 18 chr2 145811495 145811665 -107444918 + L1MB4 LINE L1 43 221 -6321 2081 250 74 41 chr2 145811977 145812877 -107443706 + L1MB4 LINE L1 811 1740 -4906 3222 248 56 30 chr2 145812884 145814208 -107442375 + L1MB4 LINE L1 2820 4178 -2466 3151 205 81 44 chr2 145814198 145814746 -107441837 + L1MB4 LINE L1 5003 5529 -1149 * 2793 25 0 0 chr2 145814746 145815064 -107441519 + AluYb8 SINE Alu 1 318 0 3151 205 81 44 chr2 145815064 145816143 -107440440 + L1MB4 LINE L1 5529 6677 -1 3713 91 58 6 chr2 145817593 145818130 -107438453 + MER61E LTR ERV1 1 565 -4 254 346 78 20 chr2 145818263 145818416 -107438167 + L1MC/D LINE L1 5494 5655 -2153 5165 78 3 24 chr2 145818419 145819125 -107437458 - LTR8 LTR ERV1 0 691 1 256 311 0 0 chr2 145819192 145819282 -107437301 + MIR SINE MIR 160 249 -13 26 30 0 0 chr2 145819517 145819550 -107437033 + AT_rich Low_complexity Low_complexity 1 33 0 2428 81 3 3 chr2 145819582 145819889 -107436694 + AluSp SINE Alu 2 308 -5 2097 178 34 29 chr2 145820335 145820884 -107435699 + MLT2A2 LTR ERVL 1 554 0 2325 195 100 44 chr2 145822702 145823390 -107433193 + LTR8A LTR ERV1 1 727 0 1377 297 78 15 chr2 145823594 145824580 -107432003 - MER69B DNA AcHobo -87 1139 49 3718 138 47 5 chr2 145824690 145825308 -107431275 + LTR9B LTR ERV1 1 644 0 189 147 0 0 chr2 145825703 145825737 -107430846 + (A)n Simple_repeat Simple_repeat 1 34 0 261 0 0 0 chr2 145826539 145826568 -107430015 + (TA)n Simple_repeat Simple_repeat 2 30 0 * 473 0 18 0 chr2 145826567 145826624 -107429959 + (GA)n Simple_repeat Simple_repeat 2 59 0 26 30 0 0 chr2 145828223 145828256 -107428327 + AT_rich Low_complexity Low_complexity 1 33 0 222 292 33 58 chr2 145828476 145828596 -107427987 - MIR SINE MIR 0 262 146 345 297 27 54 chr2 145829905 145830053 -107426530 - MER5A DNA MER1_type -2 187 44 1807 141 3 11 chr2 145830646 145830978 -107425605 + AluSx SINE Alu 3 332 0 206 32 32 0 chr2 145831275 145831306 -107425277 + (TTTTTA)n Simple_repeat Simple_repeat 5 36 0 7796 17 2 0 chr2 145831306 145832246 -107424337 - L1HS LINE L1 0 6155 5214 8649 30 0 0 chr2 145832247 145833275 -107423308 + L1P LINE L1 3190 4217 -1929 194 219 125 47 chr2 145834608 145834672 -107421911 - L2 LINE L2 -1 3271 3203 25 31 0 0 chr2 145834830 145834862 -107421721 + AT_rich Low_complexity Low_complexity 1 32 0 226 267 44 22 chr2 145834876 145834966 -107421617 - MER102b DNA MER1_type -10 331 240 334 353 84 22 chr2 145835355 145835741 -107420842 - L1ME3A LINE L1 -307 5863 5452 456 291 82 28 chr2 145836071 145836353 -107420230 - L1ME3A LINE L1 -1117 5029 4733 450 0 0 0 chr2 145836408 145836458 -107420125 + (TA)n Simple_repeat Simple_repeat 1 50 0 6147 71 4 4 chr2 145836510 145837344 -107419239 + L1PA7 LINE L1 5335 6168 0 318 346 95 24 chr2 145837612 145837991 -107418592 + LTR16C LTR ERVL 76 481 -10 2466 173 22 2 chr2 145837993 145838439 -107418144 - MSTB2 LTR MaLR 0 457 3 209 250 83 14 chr2 145838535 145838607 -107417976 - MIR SINE MIR -123 139 63 1749 287 72 15 chr2 145838815 145839400 -107417183 + MLT2E LTR ERVL 11 628 0 359 304 0 0 chr2 145840956 145841048 -107415535 - MER96 DNA MER1_type? 0 175 84 369 86 0 0 chr2 145841242 145841300 -107415283 + (A)n Simple_repeat Simple_repeat 1 58 0 1413 219 70 64 chr2 145841863 145842361 -107414222 + MLT1D LTR MaLR 1 501 -4 204 360 13 13 chr2 145842761 145842836 -107413747 - L2 LINE L2 -1 3271 3197 290 313 113 7 chr2 145842937 145843087 -107413496 - MIR SINE MIR -40 222 57 1148 241 96 122 chr2 145843697 145844723 -107411860 + MER52A LTR ERV1 663 1661 -94 222 143 0 0 chr2 145845160 145845174 -107411409 + (A)n Simple_repeat Simple_repeat 1 14 -28 864 96 0 22 chr2 145845174 145845310 -107411273 + FLAM_C SINE Alu 1 133 0 222 143 0 0 chr2 145845310 145845337 -107411246 + (A)n Simple_repeat Simple_repeat 13 42 0 2284 79 7 20 chr2 145845822 145846127 -107410456 + AluY SINE Alu 1 301 -10 28 79 0 0 chr2 145846733 145846796 -107409787 + AT_rich Low_complexity Low_complexity 1 63 0 1643 175 11 55 chr2 145847551 145847899 -107408684 - MER2 DNA MER2_type -8 337 5 23 86 0 0 chr2 145848719 145848777 -107407806 + AT_rich Low_complexity Low_complexity 1 58 0 519 272 140 74 chr2 145848788 145849302 -107407281 + L1ME LINE L1 5284 5814 -307 242 297 0 0 chr2 145849319 145849393 -107407190 + (TA)n Simple_repeat Simple_repeat 1 74 0 21 82 0 0 chr2 145851313 145851362 -107405221 + AT_rich Low_complexity Low_complexity 1 49 0 538 335 121 35 chr2 145852612 145852871 -107403712 + L3 LINE CR1 533 768 -809 528 300 74 0 chr2 145852871 145853114 -107403469 - MIR SINE MIR 0 262 2 538 335 121 35 chr2 145853114 145853424 -107403159 + L3 LINE CR1 768 1151 -426 555 371 43 0 chr2 145853455 145853687 -107402896 - MIR SINE MIR -14 248 7 209 333 81 20 chr2 145853745 145853844 -107402739 + L3 LINE CR1 1281 1385 -192 231 229 21 0 chr2 145853986 145854034 -107402549 - L2 LINE L2 -271 3042 2994 189 191 0 64 chr2 145854155 145854202 -107402381 + L2 LINE L2 3270 3313 0 542 274 5 65 chr2 145854684 145854870 -107401713 - MIR SINE MIR -59 203 29 475 287 88 6 chr2 145855181 145855362 -107401221 + L3 LINE CR1 1256 1451 -126 916 256 9 0 chr2 145855412 145855631 -107400952 - MER58A DNA MER1_type -3 221 1 275 207 35 168 chr2 145855710 145855942 -107400641 + MER58C DNA MER1_type 11 211 -4 2059 148 7 3 chr2 145856119 145856429 -107400154 + AluSx SINE Alu 1 311 -1 573 101 90 0 chr2 145856736 145856825 -107399758 + Tigger4(Zombi) DNA MER2_type 14 110 -2621 * 14913 141 50 25 chr2 145856821 145859444 -107397139 + Tigger4(Zombi) DNA MER2_type 43 2731 0 21 0 0 0 chr2 145859720 145859741 -107396842 + AT_rich Low_complexity Low_complexity 1 21 0 1177 198 0 22 chr2 145860465 145860697 -107395886 - AluJb SINE Alu -4 308 82 23 0 0 0 chr2 145861348 145861371 -107395212 + AT_rich Low_complexity Low_complexity 1 23 0 42 36 0 0 chr2 145864435 145864491 -107392092 + AT_rich Low_complexity Low_complexity 1 56 0 2066 34 0 30 chr2 145865304 145865424 -107391159 - L1PA4 LINE L1 -212 5943 5821 7284 37 29 1 chr2 145865424 145866297 -107390286 - MER11D LTR ERVK 0 897 1 2066 34 0 30 chr2 145866297 145866439 -107390144 - L1PA4 LINE L1 -334 5821 5689 1250 37 25 0 chr2 145866439 145866598 -107389985 + L1PA4 LINE L1 5987 6152 -3 254 149 0 0 chr2 145866627 145866674 -107389909 + L1PB4 LINE L1 6110 6156 0 835 281 78 28 chr2 145866700 145866730 -107389853 + L1M4 LINE L1 3117 3144 -3002 2162 125 0 0 chr2 145866730 145867035 -107389548 + AluSx SINE Alu 1 305 -7 835 281 78 28 chr2 145867035 145867435 -107389148 + L1M4 LINE L1 3144 3600 -2546 2090 143 0 0 chr2 145867435 145867736 -107388847 + AluSx SINE Alu 1 301 -11 835 281 78 28 chr2 145867736 145868018 -107388565 + L1M4 LINE L1 3600 3866 -2280 1184 214 119 52 chr2 145868024 145868479 -107388104 - MLT1E2 LTR MaLR -8 497 54 1744 271 77 32 chr2 145868505 145869332 -107387251 + L1M4 LINE L1 3858 4744 -1402 1466 207 96 3 chr2 145869332 145869666 -107386917 + MLT1A1 LTR MaLR 1 365 0 1744 271 77 32 chr2 145869666 145869893 -107386690 + L1M4 LINE L1 4744 4959 -1187 2225 74 37 0 chr2 145869932 145870052 -107386531 + AluY SINE Alu 1 115 -196 192 40 0 0 chr2 145870052 145870077 -107386506 + (CA)n Simple_repeat Simple_repeat 2 26 0 2225 74 37 0 chr2 145870077 145870253 -107386330 + AluY SINE Alu 115 308 -3 2031 148 3 0 chr2 145871112 145871410 -107385173 + AluSx SINE Alu 3 301 -11 803 143 8 8 chr2 145873027 145873160 -107383423 - FLAM_C SINE Alu 0 133 1 791 315 132 22 chr2 145873235 145873689 -107382894 + L2 LINE L2 2201 2704 -610 2320 157 23 28 chr2 145873823 145874251 -107382332 + MSTB LTR MaLR 1 426 0 292 313 28 28 chr2 145875117 145875261 -107381322 + MIR SINE MIR 11 154 -108 220 274 0 0 chr2 145875299 145875350 -107381233 + (CAT)n Simple_repeat Simple_repeat 3 53 0 997 282 46 40 chr2 145876718 145877208 -107379375 + MLT1E LTR MaLR 67 580 -9 30 0 0 0 chr2 145879602 145879632 -107376951 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 145879669 145879690 -107376893 + AT_rich Low_complexity Low_complexity 1 21 0 5044 75 4 3 chr2 145880571 145881261 -107375322 - L1PA3 LINE L1 0 6155 5465 616 317 98 0 chr2 145882100 145882324 -107374259 + MIR SINE MIR 17 262 0 22 94 0 0 chr2 145882345 145882409 -107374174 + AT_rich Low_complexity Low_complexity 1 64 0 1468 172 15 34 chr2 145884614 145884806 -107371777 + MER33 DNA MER1_type 1 186 -2399 2167 123 3 0 chr2 145884806 145885108 -107371475 + AluSx SINE Alu 1 303 -9 1468 172 15 34 chr2 145885108 145885241 -107371342 + MER33 DNA MER1_type 186 320 -4 1744 210 83 2 chr2 145885963 145886359 -107370224 + MSTA LTR MaLR 1 428 0 448 274 51 57 chr2 145887062 145887237 -107369346 - MER21B LTR ERV1 -362 501 328 21 0 0 0 chr2 145887313 145887334 -107369249 + AT_rich Low_complexity Low_complexity 1 21 0 7460 34 0 0 chr2 145887500 145888626 -107367957 - L1PA4 LINE L1 -1 6154 5030 5275 43 0 0 chr2 145888626 145889274 -107367309 + L1P LINE L1 4417 5064 -1082 323 275 144 24 chr2 145890087 145890254 -107366329 + MIR SINE MIR 12 198 -64 30 0 0 44 chr2 145890491 145890517 -107366066 + AT_rich Low_complexity Low_complexity 1 26 -17 1772 163 0 10 chr2 145890517 145890806 -107365777 - AluSx SINE Alu -26 286 1 30 0 0 44 chr2 145890806 145890824 -107365759 + AT_rich Low_complexity Low_complexity 26 43 0 2164 119 0 0 chr2 145891139 145891432 -107365151 - AluSc SINE Alu -16 293 1 23 0 0 0 chr2 145891593 145891616 -107364967 + AT_rich Low_complexity Low_complexity 1 23 0 363 269 0 0 chr2 145893045 145893138 -107363445 + MER5A DNA MER1_type 13 105 -84 520 125 0 0 chr2 145893914 145893994 -107362589 - MADE1 DNA Mariner 0 80 1 2400 211 23 42 chr2 145894895 145894924 -107361659 + MER34B LTR ERV1 7 35 -530 1977 124 0 3 chr2 145894924 145895233 -107361350 - AluSg SINE Alu 0 308 1 2400 211 23 42 chr2 145895233 145895772 -107360811 + MER34B LTR ERV1 35 565 0 316 258 86 60 chr2 145895774 145896007 -107360576 - L1M4 LINE L1 -2789 3357 3119 2701 199 32 21 chr2 145896239 145896866 -107359717 - LTR27 LTR ERV1 0 636 3 32 26 0 0 chr2 145897259 145897298 -107359285 + AT_rich Low_complexity Low_complexity 1 39 0 355 336 0 0 chr2 145897981 145898109 -107358474 - MIR SINE MIR -35 227 100 24 67 0 0 chr2 145899038 145899083 -107357500 + AT_rich Low_complexity Low_complexity 1 45 0 1087 253 17 17 chr2 145899088 145899385 -107357198 + L1ME1 LINE L1 5791 6087 -79 534 254 30 30 chr2 145899417 145899582 -107357001 + L1MD2 LINE L1 6194 6358 -1 1936 130 14 3 chr2 145899586 145899878 -107356705 + AluSx SINE Alu 1 295 -17 686 230 24 6 chr2 145900021 145900186 -107356397 + MIR SINE MIR 71 238 -24 544 331 100 21 chr2 145900253 145900830 -107355753 - L2 LINE L2 -4 3309 2640 1551 224 91 12 chr2 145900839 145901267 -107355316 - MLT1D LTR MaLR -7 498 37 1392 271 139 34 chr2 145901289 145902022 -107354561 - L2 LINE L2 -683 2631 1822 884 123 7 0 chr2 145902166 145902304 -107354279 - L1PA13 LINE L1 -2 6161 6023 2819 234 10 17 chr2 145902304 145903019 -107353564 - L1 LINE L1 -1831 4315 3604 689 287 57 32 chr2 145903019 145903333 -107353250 - LTR52 LTR ERVL -99 322 1 446 284 24 108 chr2 145903334 145903584 -107352999 - L2 LINE L2 -2999 315 87 295 371 74 6 chr2 145903711 145903886 -107352697 - MIR SINE MIR -74 188 2 21 36 0 0 chr2 145904364 145904392 -107352191 + AT_rich Low_complexity Low_complexity 1 28 0 2155 121 0 3 chr2 145904640 145904945 -107351638 + AluSq SINE Alu 1 304 -9 27 0 0 0 chr2 145905377 145905404 -107351179 + AT_rich Low_complexity Low_complexity 1 27 0 1807 181 0 0 chr2 145905412 145905700 -107350883 - AluJb SINE Alu -24 288 1 23 0 0 0 chr2 145905932 145905955 -107350628 + AT_rich Low_complexity Low_complexity 1 23 0 225 268 103 57 chr2 145906462 145906656 -107349927 + Charlie8 DNA MER1_type 68 270 -2147 6824 141 14 5 chr2 145906778 145908691 -107347892 - L1MA1 LINE L1 0 6302 4372 815 194 79 0 chr2 145908687 145908852 -107347731 - L1MA1 LINE L1 -2192 3954 3777 * 21 36 0 0 chr2 145909161 145909189 -107347394 + AT_rich Low_complexity Low_complexity 1 28 0 2024 175 23 7 chr2 145909267 145909706 -107346877 - L1MA4 LINE L1 -1380 4766 4321 * 5231 175 25 35 chr2 145909705 145911191 -107345392 + L1MA4 LINE L1 4767 6259 -41 40 87 0 0 chr2 145911229 145911332 -107345251 + AT_rich Low_complexity Low_complexity 1 103 0 638 194 163 0 chr2 145913842 145914002 -107342581 - MER5A DNA MER1_type 0 189 4 237 362 93 16 chr2 145915936 145916193 -107340390 - L2 LINE L2 -995 2319 2043 1975 233 39 22 chr2 145916263 145916727 -107339856 + MER70B LTR ERVL 5 476 -102 227 125 0 0 chr2 145916725 145916757 -107339826 + MER70A LTR ERVL 441 472 0 * 2049 94 10 34 chr2 145916793 145917090 -107339493 + AluSc SINE Alu 1 290 -19 252 246 88 52 chr2 145917090 145917251 -107339332 - MLT1F LTR MaLR -34 561 303 1902 123 28 67 chr2 145917251 145917641 -107338942 + THE1C LTR MaLR 1 375 0 252 246 88 52 chr2 145917641 145917655 -107338928 - MLT1F LTR MaLR -292 303 291 1622 117 3 1 chr2 145917659 145917994 -107338589 + THE1C-int LTR MaLR 19 375 0 709 264 25 93 chr2 145918001 145918352 -107338231 - MLT1G1 LTR MaLR -224 371 1 10559 33 0 1 chr2 145919319 145921353 -107335230 - L1PA3 LINE L1 0 6155 4122 16826 28 1 0 chr2 145921353 145923390 -107333193 + L1PA3 LINE L1 2100 4138 -2008 399 145 0 0 chr2 145923408 145923477 -107333106 + (TTCCC)n Simple_repeat Simple_repeat 1 69 0 1590 177 3 43 chr2 145923477 145923777 -107332806 - AluJo SINE Alu -24 288 1 424 208 10 0 chr2 145923874 145923970 -107332613 + MER94 DNA DNA 17 113 -21 256 316 115 7 chr2 145924112 145924251 -107332332 + MIR SINE MIR 17 170 -92 1828 221 73 33 chr2 145924264 145924592 -107331991 - L1MEc LINE L1 -3390 2825 2512 201 39 0 0 chr2 145924592 145924618 -107331965 + (TG)n Simple_repeat Simple_repeat 1 26 0 1828 221 73 33 chr2 145924618 145924915 -107331668 - L1MEc LINE L1 -3703 2512 2198 2014 133 3 3 chr2 145924915 145925209 -107331374 - AluSx SINE Alu -18 294 1 1828 221 73 33 chr2 145925209 145925424 -107331159 - L1MEc LINE L1 -4017 2198 1993 618 247 81 18 chr2 145925446 145925729 -107330854 - L1MEc LINE L1 -4469 1927 1627 * 2502 249 104 52 chr2 145925702 145927169 -107329414 - L1MEc LINE L1 -3886 2510 1121 502 216 38 127 chr2 145927169 145927405 -107329178 + MER20 DNA MER1_type 1 215 -4 2502 249 104 52 chr2 145927405 145927459 -107329124 - L1MEc LINE L1 -5275 1121 1071 5974 100 35 3 chr2 145927459 145928950 -107327633 - L1PA8 LINE L1 0 6172 4658 2502 249 104 52 chr2 145928950 145929000 -107327583 - L1MEc LINE L1 -5325 1071 856 1429 300 60 10 chr2 145929013 145929279 -107327304 - L1MEc LINE L1 -5745 651 400 198 0 0 0 chr2 145929279 145929301 -107327282 + (TG)n Simple_repeat Simple_repeat 1 22 0 1429 300 60 10 chr2 145929301 145929551 -107327032 - L1MEc LINE L1 -5996 400 109 547 375 39 28 chr2 145929681 145930326 -107326257 - L1MEc LINE L1 -5706 690 39 330 261 45 0 chr2 145930329 145930417 -107326166 + MIR SINE MIR 169 260 -2 383 285 30 141 chr2 145930432 145930965 -107325618 + L2 LINE L2 2838 3311 -2 616 316 107 36 chr2 145931658 145932136 -107324447 + L1MCc LINE L1 72 583 -5840 666 313 48 22 chr2 145932746 145933104 -107323479 + L1ME4a LINE L1 5483 5849 -272 237 196 0 0 chr2 145933119 145933170 -107323413 + (TATATG)n Simple_repeat Simple_repeat 3 53 0 310 289 0 0 chr2 145933347 145933430 -107323153 - MER94 DNA DNA -51 83 1 2387 124 19 14 chr2 145934200 145934562 -107322021 + THE1B LTR MaLR 1 364 0 276 294 96 66 chr2 145934909 145935106 -107321477 + L3 LINE CR1 885 1087 -490 231 290 71 58 chr2 145935249 145935404 -107321179 + L3 LINE CR1 1178 1334 -243 65 25 0 0 chr2 145936285 145936364 -107320219 + AT_rich Low_complexity Low_complexity 1 79 0 1714 129 76 0 chr2 145936873 145937187 -107319396 - AluSx SINE Alu 0 334 1 1547 265 125 30 chr2 145937333 145937900 -107318683 - MLT1E2 LTR MaLR 0 626 6 1162 308 46 8 chr2 145938360 145938733 -107317850 + LTR16A LTR ERVL 18 404 -46 1001 188 28 14 chr2 145939337 145939550 -107317033 + AluJo SINE Alu 24 239 -73 743 155 0 7 chr2 145939551 145939693 -107316890 + GA-rich Low_complexity Low_complexity 2 142 0 2139 92 16 3 chr2 145939807 145940112 -107316471 + pTR5 LTR ERV1 60 368 -2070 3609 220 46 19 chr2 145940112 145941087 -107315496 + L1PA12 LINE L1 2152 3154 -4430 1001 169 49 16 chr2 145941107 145941290 -107315293 + AluJo SINE Alu 16 204 -108 2428 182 20 28 chr2 145941453 145942052 -107314531 - pTR5 LTR ERV1 -1102 1336 743 1832 291 44 47 chr2 145942053 145943075 -107313508 - L1PA12 LINE L1 -5398 2183 1271 673 164 14 7 chr2 145943401 145943541 -107313042 + GA-rich Low_complexity Low_complexity 2 142 0 1954 103 3 24 chr2 145943903 145944193 -107312390 + AluSx SINE Alu 1 284 -28 1045 210 36 131 chr2 145944942 145945332 -107311251 + MLT1A1 LTR MaLR 1 353 -12 7618 234 15 24 chr2 145945533 145946611 -107309972 + L1PA12 LINE L1 3224 4275 -3309 6763 25 2 4 chr2 145946611 145947410 -107309173 + L1PA3 LINE L1 5355 6152 -3 7618 234 15 24 chr2 145947410 145948442 -107308141 + L1PA12 LINE L1 4275 5315 -2269 1112 197 0 25 chr2 145948457 145948696 -107307887 + L1 LINE L1 5802 6034 -1550 2187 204 23 47 chr2 145948700 145949084 -107307499 + L1P LINE L1 6261 6628 -956 1919 186 51 14 chr2 145949084 145949497 -107307086 + MSTA LTR MaLR 1 428 0 2187 204 23 47 chr2 145949497 145949682 -107306901 + L1P LINE L1 6628 6816 -768 1831 156 6 16 chr2 145949876 145950191 -107306392 - AluSx SINE Alu 0 312 1 485 321 77 39 chr2 145951166 145951595 -107304988 + MLT1J2 LTR MaLR 5 450 0 23 0 0 0 chr2 145952196 145952219 -107304364 + AT_rich Low_complexity Low_complexity 1 23 0 560 297 48 36 chr2 145954005 145954342 -107302241 + L1MC3 LINE L1 5644 5984 -1801 * 2795 193 21 46 chr2 145954054 145954706 -107301877 + L1MA10 LINE L1 5699 6334 0 219 146 0 0 chr2 145954811 145954852 -107301731 + (T)n Simple_repeat Simple_repeat 1 41 0 254 283 87 0 chr2 145955111 145955203 -107301380 - MIR SINE MIR -40 222 123 2245 107 0 16 chr2 145955786 145956104 -107300479 - AluSq SINE Alu 0 313 1 245 191 0 0 chr2 145956310 145956357 -107300226 - MIR SINE MIR -95 113 67 268 331 103 7 chr2 145957071 145957216 -107299367 - MIR3 SINE MIR -45 163 5 257 250 32 101 chr2 145957588 145957776 -107298807 - MER104 DNA Tc2 -4 176 2 371 314 39 7 chr2 145957815 145957968 -107298615 - MIR SINE MIR -20 242 85 10882 106 17 3 chr2 145958923 145960481 -107296102 + THE1A-int LTR MaLR 2 1580 0 2752 70 6 6 chr2 145960481 145960836 -107295747 + THE1A LTR MaLR 1 355 0 216 238 0 0 chr2 145961167 145961209 -107295374 - MER5B DNA MER1_type -136 42 1 2412 295 90 15 chr2 145962109 145963206 -107293377 - MER69B DNA AcHobo -39 1187 8 2082 126 0 3 chr2 145963336 145963637 -107292946 + AluSc SINE Alu 3 302 -7 1005 85 8 0 chr2 145964090 145964219 -107292364 + AluSc SINE Alu 1 130 -179 21 0 0 0 chr2 145965479 145965500 -107291083 + AT_rich Low_complexity Low_complexity 1 21 0 2247 89 0 7 chr2 145965502 145965793 -107290790 + AluSx SINE Alu 1 289 -23 759 10 30 0 chr2 145965793 145965893 -107290690 + (TCTA)n Simple_repeat Simple_repeat 4 106 0 490 308 36 5 chr2 145967001 145967196 -107289387 + L1MCc LINE L1 921 1121 -5302 284 148 37 99 chr2 145967209 145967290 -107289293 + L1MCc LINE L1 24 99 -6324 26 30 0 0 chr2 145967421 145967454 -107289129 + AT_rich Low_complexity Low_complexity 1 33 0 16256 179 33 13 chr2 145970095 145974417 -107282166 + L1MA4A LINE L1 705 5132 -2433 907 97 14 7 chr2 145974417 145974562 -107282021 + (GAAA)n Simple_repeat Simple_repeat 4 149 0 16256 179 33 13 chr2 145974562 145974921 -107281662 + L1MA4A LINE L1 5132 5482 -2083 2645 180 30 15 chr2 145974914 145975441 -107281142 + L1MA4A LINE L1 7166 7700 -22 * 31 44 0 0 chr2 145975441 145975486 -107281097 + AT_rich Low_complexity Low_complexity 1 45 0 320 233 93 6 chr2 145975491 145975663 -107280920 + L1MB7 LINE L1 5728 5914 -1651 * 560 204 91 0 chr2 145975661 145975723 -107280860 - L1 LINE L1 -775 5371 5316 180 0 0 0 chr2 145975723 145975743 -107280840 + (TTA)n Simple_repeat Simple_repeat 2 21 0 560 204 91 0 chr2 145975743 145975812 -107280771 - L1 LINE L1 -830 5316 5228 * 1671 241 40 2 chr2 145975810 145976266 -107280317 + L1MB7 LINE L1 6786 7258 -345 341 258 101 62 chr2 145976276 145976445 -107280138 + L1M1 LINE L1 6427 6588 -977 1875 133 194 6 chr2 145976445 145976805 -107279778 - MSTA LTR MaLR 0 428 1 341 258 101 62 chr2 145976805 145976992 -107279591 + L1M1 LINE L1 6588 6797 -768 1724 171 10 7 chr2 145977259 145977569 -107279014 - AluJo SINE Alu -1 311 1 227 284 56 116 chr2 145977781 145978084 -107278499 + HAL1 LINE L1 409 693 -1814 208 215 76 51 chr2 145978235 145978314 -107278269 + L2 LINE L2 3233 3313 0 336 238 25 0 chr2 145979059 145979139 -107277444 + MIR SINE MIR 159 240 -22 216 250 21 0 chr2 145979106 145979154 -107277429 + L2 LINE L2 3211 3259 -13 * 510 222 0 0 chr2 145979411 145979528 -107277055 - L1MA9 LINE L1 -30 6282 6166 303 49 0 0 chr2 145979528 145979569 -107277014 + (TG)n Simple_repeat Simple_repeat 2 42 0 3239 173 5 11 chr2 145979569 145980130 -107276453 - Tigger1 DNA MER2_type -1858 560 3 2571 186 27 59 chr2 145980132 145980755 -107275828 - L1MA9 LINE L1 -201 6111 5509 218 193 18 0 chr2 145981317 145981374 -107275209 + (TA)n Simple_repeat Simple_repeat 2 59 0 313 322 0 0 chr2 145981376 145981466 -107275117 - L1MC4 LINE L1 -1339 6703 6614 204 40 0 0 chr2 145981479 145981504 -107275079 + (CATATA)n Simple_repeat Simple_repeat 3 27 0 277 233 47 0 chr2 145981508 145981594 -107274989 - L1MC4 LINE L1 -1339 6703 6614 204 40 0 0 chr2 145981613 145981638 -107274945 + (TA)n Simple_repeat Simple_repeat 2 26 0 1435 186 9 0 chr2 145982061 145982292 -107274291 + 7SLRNA srpRNA srpRNA 1 233 -87 1347 188 65 43 chr2 145982385 145982710 -107273873 - MER44D DNA MER2_type -7 602 1 4527 156 9 4 chr2 145982912 145983682 -107272901 - L1PA15 LINE L1 0 6165 5392 408 241 62 62 chr2 146033688 146033989 -107222594 - L1MD3 LINE L1 -1197 6611 6311 1959 101 10 28 chr2 146033989 146034305 -107222278 - AluY SINE Alu 0 311 1 408 241 62 62 chr2 146034305 146034700 -107221883 - L1MD3 LINE L1 -1496 6312 5967 267 31 0 0 chr2 146034704 146034736 -107221847 + (TA)n Simple_repeat Simple_repeat 2 33 0 198 0 0 0 chr2 146034780 146034802 -107221781 + (TG)n Simple_repeat Simple_repeat 2 23 0 1889 187 74 20 chr2 146036015 146036421 -107220162 - MSTA LTR MaLR 0 428 1 462 325 55 18 chr2 146037717 146037880 -107218703 - MIR SINE MIR -21 241 73 1176 242 42 37 chr2 146037982 146038383 -107218200 - L1MA9 LINE L1 -38 6274 5872 1424 145 8 0 chr2 146038483 146038718 -107217865 - AluSx SINE Alu -75 237 1 300 306 22 30 chr2 146038724 146038858 -107217725 + L1MC4a LINE L1 6377 6509 -1299 664 217 50 108 chr2 146038936 146039333 -107217250 + L1MC5 LINE L1 6690 7063 -898 527 281 44 20 chr2 146039365 146039435 -107217148 + L1MC5 LINE L1 7198 7265 -696 207 0 0 0 chr2 146039435 146039458 -107217125 + (TAA)n Simple_repeat Simple_repeat 1 23 0 527 281 44 20 chr2 146039458 146039636 -107216947 + L1MC5 LINE L1 7265 7452 -509 494 300 0 0 chr2 146039741 146039861 -107216722 + MER5B DNA MER1_type 45 164 -14 536 241 110 63 chr2 146039885 146040232 -107216351 + L1MC5 LINE L1 7499 7869 -92 1496 245 96 25 chr2 146040232 146040713 -107215870 - LTR40a LTR ERVL -1 518 4 536 241 110 63 chr2 146040713 146040775 -107215808 + L1MC5 LINE L1 7869 7927 -34 379 299 123 36 chr2 146040781 146041632 -107214951 + L1M4 LINE L1 2131 3055 -3091 3621 119 82 82 chr2 146041770 146042729 -107213854 + pTR5 LTR ERV1 766 2025 -413 286 216 41 21 chr2 146042729 146042826 -107213757 + LTR30 LTR ERV1 544 642 -80 1371 114 5 5 chr2 146042829 146043039 -107213544 + pTR5 LTR ERV1 172 381 -2057 1722 192 34 3 chr2 146043039 146043393 -107213190 - L1MA9 LINE L1 -635 5677 5313 286 280 75 21 chr2 146043755 146043848 -107212735 + L2 LINE L2 3171 3268 -4 1764 153 3 31 chr2 146046762 146047082 -107209501 + AluJb SINE Alu 1 311 -1 262 317 24 98 chr2 146047683 146047779 -107208804 - MARNA DNA Mariner -105 481 380 267 31 0 0 chr2 146047779 146047811 -107208772 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2034 111 11 0 chr2 146047813 146048093 -107208490 - AluSp SINE Alu -30 283 1 262 317 24 98 chr2 146048093 146048198 -107208385 - MARNA DNA Mariner -207 379 292 440 243 83 0 chr2 146048308 146048452 -107208131 + L1MC4a LINE L1 5689 5844 -1964 202 95 48 0 chr2 146049700 146049742 -107206841 + GA-rich Low_complexity Low_complexity 3 46 0 37 0 0 0 chr2 146050724 146050761 -107205822 + AT_rich Low_complexity Low_complexity 1 37 0 257 332 68 42 chr2 146052126 146052316 -107204267 + MIR SINE MIR 28 222 -40 252 0 0 0 chr2 146052324 146052352 -107204231 + (TA)n Simple_repeat Simple_repeat 2 29 0 234 0 0 0 chr2 146052579 146052605 -107203978 + (TA)n Simple_repeat Simple_repeat 2 27 0 201 171 0 0 chr2 146053848 146053883 -107202700 + T-rich Low_complexity Low_complexity 1 35 0 2635 48 0 0 chr2 146054896 146055207 -107201376 + AluY SINE Alu 1 311 0 2496 143 14 114 chr2 146055688 146056170 -107200413 + Tigger2 DNA MER2_type 1 2718 0 235 214 0 0 chr2 146056268 146056324 -107200259 - L1MC4 LINE L1 -1337 6705 6650 297 0 0 0 chr2 146056605 146056638 -107199945 + (CA)n Simple_repeat Simple_repeat 2 34 0 287 363 0 52 chr2 146056846 146056981 -107199602 + MIR3 SINE MIR 55 182 -26 2050 164 16 8 chr2 146056981 146057364 -107199219 - L1MC3 LINE L1 0 7785 7400 215 191 43 0 chr2 146057972 146058019 -107198564 + (CATATA)n Simple_repeat Simple_repeat 5 53 0 447 343 39 13 chr2 146059528 146059761 -107196822 + MIR SINE MIR 11 249 -13 230 188 38 38 chr2 146060988 146061068 -107195515 + (TAAA)n Simple_repeat Simple_repeat 1 80 0 21 0 0 0 chr2 146062158 146062179 -107194404 + AT_rich Low_complexity Low_complexity 1 21 0 5734 145 29 15 chr2 146062677 146062958 -107193625 + L1MA4 LINE L1 5132 5408 -892 2237 107 0 0 chr2 146062958 146063256 -107193327 + AluSx SINE Alu 1 298 -14 186 43 0 0 chr2 146063256 146063279 -107193304 + (GA)n Simple_repeat Simple_repeat 2 24 0 5734 145 29 15 chr2 146063279 146064124 -107192459 + L1MA4 LINE L1 5407 6278 -22 378 294 82 18 chr2 146064174 146064344 -107192239 - MLT1I LTR MaLR -3 406 226 1624 263 61 11 chr2 146064665 146065206 -107191377 - L1MC4 LINE L1 -1923 5885 5318 295 212 28 50 chr2 146065363 146065542 -107191041 + G-rich Low_complexity Low_complexity 2 176 0 233 57 29 0 chr2 146065792 146065827 -107190756 + (TA)n Simple_repeat Simple_repeat 1 36 0 343 294 80 43 chr2 146068068 146068255 -107188328 + MIR SINE MIR 57 250 -12 21 36 0 0 chr2 146070414 146070442 -107186141 + AT_rich Low_complexity Low_complexity 1 28 0 30 27 0 0 chr2 146070599 146070636 -107185947 + AT_rich Low_complexity Low_complexity 1 37 0 23 54 0 0 chr2 146072188 146072225 -107184358 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr2 146072449 146072470 -107184113 + AT_rich Low_complexity Low_complexity 1 21 0 2170 153 42 47 chr2 146072759 146073189 -107183394 + MSTC LTR MaLR 1 428 0 207 270 81 14 chr2 146073583 146073657 -107182926 - MIR SINE MIR -64 144 74 1953 122 3 27 chr2 146073957 146074251 -107182332 + AluSx SINE Alu 3 289 -23 252 135 0 0 chr2 146074351 146074388 -107182195 - AluJ/FLAM SINE Alu -245 57 21 1282 251 30 59 chr2 146074697 146075171 -107181412 + MLT1C LTR MaLR 6 465 -2 239 263 13 0 chr2 146075189 146075265 -107181318 + (TA)n Simple_repeat Simple_repeat 1 77 0 22 70 0 0 chr2 146075315 146075358 -107181225 + AT_rich Low_complexity Low_complexity 1 43 0 1278 170 7 19 chr2 146075552 146075822 -107180761 - L1MA4 LINE L1 -11 6289 6023 198 0 0 0 chr2 146076631 146076653 -107179930 + (TC)n Simple_repeat Simple_repeat 1 22 0 1506 289 118 0 chr2 146076692 146077250 -107179333 - L1MC4 LINE L1 -181 7861 7238 1292 234 25 118 chr2 146077281 146077889 -107178694 - L1MC4 LINE L1 -989 7053 6503 237 259 17 0 chr2 146078410 146078468 -107178115 + Tigger1 DNA MER2_type 2 60 -2358 260 88 0 0 chr2 146078468 146078502 -107178081 - U2 snRNA snRNA -153 35 2 5744 169 56 22 chr2 146078504 146079622 -107176961 + Tigger1 DNA MER2_type 53 1208 -1210 5017 157 27 21 chr2 146079735 146080069 -107176514 + Tigger1 DNA MER2_type 1492 1822 -596 2095 120 3 3 chr2 146080069 146080378 -107176205 + AluSx SINE Alu 1 309 -3 5017 157 27 21 chr2 146080378 146080960 -107175623 + Tigger1 DNA MER2_type 1822 2414 -4 21 0 0 0 chr2 146082074 146082095 -107174488 + AT_rich Low_complexity Low_complexity 1 21 0 2253 73 7 10 chr2 146084046 146084347 -107172236 + AluY SINE Alu 1 300 -11 38 75 0 0 chr2 146084766 146084846 -107171737 + AT_rich Low_complexity Low_complexity 1 80 0 414 179 45 0 chr2 146085492 146085604 -107170979 + GA-rich Low_complexity Low_complexity 2 118 0 21 0 0 0 chr2 146085662 146085683 -107170900 + AT_rich Low_complexity Low_complexity 1 21 0 231 88 0 0 chr2 146085822 146085856 -107170727 + (TCTA)n Simple_repeat Simple_repeat 1 34 0 32 75 0 0 chr2 146085860 146085927 -107170656 + AT_rich Low_complexity Low_complexity 1 67 0 221 319 0 43 chr2 146086323 146086464 -107170119 + T-rich Low_complexity Low_complexity 3 137 0 1969 137 10 3 chr2 146086601 146086894 -107169689 + AluSq SINE Alu 1 295 -18 189 0 0 0 chr2 146086894 146086915 -107169668 + (TA)n Simple_repeat Simple_repeat 2 22 0 545 173 89 78 chr2 146087288 146087399 -107169184 - L1MA9 LINE L1 -37 6275 6160 1606 191 10 14 chr2 146087399 146087693 -107168890 - AluJo SINE Alu -19 293 1 545 173 89 78 chr2 146087693 146087760 -107168823 - L1MA9 LINE L1 -152 6160 6095 861 171 41 0 chr2 146088536 146088706 -107167877 - AluSq SINE Alu -16 297 121 959 249 110 52 chr2 146089183 146089528 -107167055 - MLT1A1 LTR MaLR 0 365 1 25 0 0 0 chr2 146089827 146089852 -107166731 + AT_rich Low_complexity Low_complexity 1 25 0 36 70 0 0 chr2 146092550 146092621 -107163962 + AT_rich Low_complexity Low_complexity 1 71 0 202 208 0 21 chr2 146092914 146092962 -107163621 + (CA)n Simple_repeat Simple_repeat 2 48 0 395 303 45 57 chr2 146093112 146093338 -107163245 + L1MEd LINE L1 281 505 -5614 2906 122 7 2 chr2 146093338 146093779 -107162804 - MER65A LTR ERV1 -2 443 1 395 303 45 57 chr2 146093779 146093816 -107162767 + L1MEd LINE L1 505 541 -5578 449 273 83 58 chr2 146093817 146094228 -107162355 + LTR52 LTR ERVL 1 421 0 2810 163 47 15 chr2 146094244 146094361 -107162222 - Tigger1 DNA MER2_type 0 2418 2306 1723 218 101 76 chr2 146094361 146095167 -107161416 + LTR1B LTR ERV1 1 826 0 2810 163 47 15 chr2 146095167 146095577 -107161006 - Tigger1 DNA MER2_type -112 2306 1874 * 4725 175 104 0 chr2 146095576 146096492 -107160091 - Tigger1 DNA MER2_type -1382 1036 26 619 305 115 28 chr2 146096595 146096959 -107159624 + LTR16A1 LTR ERVL 62 457 0 242 200 18 0 chr2 146097401 146097456 -107159127 - MLT1I LTR MaLR -35 374 319 275 304 13 25 chr2 146097512 146097591 -107158992 - MLT1I LTR MaLR -107 302 225 22 0 0 0 chr2 146097941 146097963 -107158620 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 146098355 146098377 -107158206 + AT_rich Low_complexity Low_complexity 1 22 0 2834 13 0 0 chr2 146098576 146098893 -107157690 - AluYb8 SINE Alu -1 317 1 373 374 16 0 chr2 146098935 146099058 -107157525 - MER5B DNA MER1_type -52 126 2 230 324 42 0 chr2 146099105 146099176 -107157407 + MER5A DNA MER1_type 36 109 -80 184 340 62 10 chr2 146100829 146100926 -107155657 - MIR SINE MIR -90 172 71 483 253 157 6 chr2 146100935 146101113 -107155470 - MIR SINE MIR -21 241 37 241 340 52 33 chr2 146101597 146101750 -107154833 + L2 LINE L2 2704 2859 -455 2015 120 3 0 chr2 146101853 146102152 -107154431 - AluSx SINE Alu -12 300 1 2190 88 0 7 chr2 146102296 146102602 -107153981 + AluY SINE Alu 1 304 -7 211 194 0 0 chr2 146102873 146102909 -107153674 + CT-rich Low_complexity Low_complexity 4 39 0 1738 98 0 0 chr2 146102910 146103144 -107153439 - AluSc SINE Alu -75 234 1 220 294 130 11 chr2 146105298 146105390 -107151193 - L2 LINE L2 -1 3271 3169 1850 224 53 27 chr2 146107367 146107917 -107148666 + L1MB8 LINE L1 5614 6177 -1 279 146 0 0 chr2 146109039 146109094 -107147489 + (TC)n Simple_repeat Simple_repeat 2 56 0 342 0 0 0 chr2 146109094 146109132 -107147451 + (CA)n Simple_repeat Simple_repeat 1 38 0 236 330 29 10 chr2 146109139 146109242 -107147341 - MIR SINE MIR -154 108 4 305 417 48 8 chr2 146109890 146110142 -107146441 - L2 LINE L2 -686 2628 2367 188 300 164 18 chr2 146110202 146110312 -107146271 + L3b LINE CR1 1388 1513 -70 24 32 0 0 chr2 146110800 146110831 -107145752 + AT_rich Low_complexity Low_complexity 1 31 0 1980 121 0 0 chr2 146111460 146111732 -107144851 - AluSq SINE Alu -41 272 1 442 330 131 23 chr2 146111748 146112054 -107144529 - MLT1E LTR MaLR -244 349 11 5427 148 11 9 chr2 146112093 146113091 -107143492 - L1PA15 LINE L1 -3 6162 5163 25 0 0 0 chr2 146113648 146113673 -107142910 + AT_rich Low_complexity Low_complexity 1 25 0 2087 87 45 3 chr2 146113684 146113973 -107142610 - AluSc SINE Alu -8 301 1 233 333 12 0 chr2 146114196 146114280 -107142303 + L1MC/D LINE L1 5513 5597 -2211 204 235 39 10 chr2 146114360 146114462 -107142121 + (TTTAA)n Simple_repeat Simple_repeat 1 105 0 2220 115 6 10 chr2 146114487 146114799 -107141784 - AluSx SINE Alu -1 311 1 22 0 0 0 chr2 146114937 146114959 -107141624 + AT_rich Low_complexity Low_complexity 1 22 0 468 232 45 9 chr2 146115611 146115723 -107140860 - MER5A DNA MER1_type 0 189 74 236 381 66 17 chr2 146116030 146116211 -107140372 - L2 LINE L2 -234 3079 2890 325 333 50 0 chr2 146116252 146116351 -107140232 + L2 LINE L2 3210 3313 0 2118 91 0 4 chr2 146116936 146117212 -107139371 - AluSx SINE Alu -27 285 11 563 90 0 0 chr2 146117213 146117291 -107139292 + Alu SINE Alu 220 297 -12 28 48 0 0 chr2 146117330 146117372 -107139211 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr2 146117510 146117531 -107139052 + AT_rich Low_complexity Low_complexity 1 21 0 1291 206 93 20 chr2 146117590 146117987 -107138596 - LTR37A LTR ERV1 0 426 1 21 0 0 0 chr2 146117997 146118018 -107138565 + AT_rich Low_complexity Low_complexity 1 21 0 25 83 0 0 chr2 146118624 146118684 -107137899 + AT_rich Low_complexity Low_complexity 1 60 0 3678 109 13 6 chr2 146118866 146119416 -107137167 - MER41A LTR ERV1 0 554 1 787 268 82 21 chr2 146119684 146119975 -107136608 + MER93b LTR ERV1 65 373 0 195 42 0 0 chr2 146121882 146121906 -107134677 + (TTTTTA)n Simple_repeat Simple_repeat 5 28 0 1446 160 7 25 chr2 146121906 146122211 -107134372 - MER4A LTR ERV1 -49 615 257 610 110 10 30 chr2 146122207 146122307 -107134276 - MER4A LTR ERV1 -566 98 1 * 342 358 47 22 chr2 146122609 146122841 -107133742 - MIR SINE MIR -12 250 13 323 283 67 17 chr2 146122930 146123050 -107133533 + MIR SINE MIR 29 154 -108 21 36 0 0 chr2 146123128 146123156 -107133427 + AT_rich Low_complexity Low_complexity 1 28 0 1325 203 8 4 chr2 146123532 146123778 -107132805 + MLT1A1 LTR MaLR 119 365 0 3276 220 49 61 chr2 146123789 146125127 -107131456 + MLT1A1-int LTR MaLR 11 1370 -1 1966 199 11 3 chr2 146125128 146125490 -107131093 + MLT1A1 LTR MaLR 1 365 0 257 315 47 20 chr2 146125491 146125640 -107130943 + MER69 DNA AcHobo 825 977 -1549 * 1292 240 59 43 chr2 146125639 146126218 -107130365 + MER69 DNA AcHobo 1938 2525 -1 2005 244 112 30 chr2 146126219 146127213 -107129370 + Charlie2 DNA MER1_type 1788 2862 0 597 64 0 0 chr2 146128984 146129062 -107127521 + (TTCC)n Simple_repeat Simple_repeat 2 79 0 1445 136 0 33 chr2 146129070 146129312 -107127271 - AluSg/x SINE Alu -10 302 69 30 45 0 0 chr2 146129348 146129392 -107127191 + AT_rich Low_complexity Low_complexity 1 44 0 199 277 277 0 chr2 146130111 146130194 -107126389 + MER5A DNA MER1_type 77 182 -7 615 380 32 34 chr2 146130319 146130790 -107125793 + L2 LINE L2 859 1328 -1986 2161 162 44 9 chr2 146131308 146131741 -107124842 + L1PA15 LINE L1 5718 6165 0 564 0 40 0 chr2 146133002 146133078 -107123505 + (TCTA)n Simple_repeat Simple_repeat 1 79 0 1905 135 0 61 chr2 146134006 146134333 -107122250 - AluSx SINE Alu -5 307 1 30 45 0 0 chr2 146135596 146135640 -107120943 + AT_rich Low_complexity Low_complexity 1 44 0 582 268 34 34 chr2 146135808 146136017 -107120566 + MARNA DNA Mariner 199 407 -179 2538 90 12 3 chr2 146137203 146137549 -107119034 - THE1A LTR MaLR 0 355 7 7368 154 14 44 chr2 146137549 146139274 -107117309 - THE1A-int LTR MaLR -7 1573 3 2421 103 47 6 chr2 146139276 146139617 -107116966 - THE1A LTR MaLR 0 355 1 381 299 10 0 chr2 146139920 146140017 -107116566 + MER69 DNA AcHobo 1 98 -2428 * 838 189 62 33 chr2 146140009 146140252 -107116331 + MER69 DNA AcHobo 2265 2514 -12 2027 203 56 50 chr2 146140501 146140998 -107115585 - MLT1D LTR MaLR -5 500 1 255 328 172 11 chr2 146141140 146141314 -107115269 - MIR SINE MIR -45 217 16 259 182 0 0 chr2 146141343 146141387 -107115196 - MADE1 DNA Mariner -1 79 36 238 344 112 26 chr2 146141442 146141747 -107114836 + L2 LINE L2 2982 3312 -1 363 377 0 7 chr2 146141948 146142102 -107114481 - MIR3 SINE MIR -18 190 38 215 286 0 0 chr2 146142371 146142413 -107114170 - L3 LINE CR1 -517 1060 1019 22 70 0 0 chr2 146142506 146142549 -107114034 + AT_rich Low_complexity Low_complexity 1 43 0 1192 327 81 74 chr2 146142568 146143549 -107113034 - L3 LINE CR1 -29 1548 562 473 209 0 0 chr2 146143993 146144079 -107112504 - L1M1 LINE L1 -774 5529 5444 287 140 0 0 chr2 146144081 146144131 -107112452 + L1MA4A LINE L1 6073 6122 -181 457 176 22 0 chr2 146144134 146144225 -107112358 + L1MA4A LINE L1 6189 6281 -22 196 256 134 12 chr2 146144707 146144789 -107111794 - L3b LINE CR1 -252 1331 1240 1865 173 0 0 chr2 146145473 146145774 -107110809 - AluSx SINE Alu -11 301 1 1914 96 0 0 chr2 146145785 146146036 -107110547 - AluY SINE Alu -6 305 55 344 358 32 8 chr2 146146285 146146408 -107110175 + L2 LINE L2 3147 3272 0 313 264 66 0 chr2 146146423 146146529 -107110054 + MIR SINE MIR 137 249 -13 2214 152 142 50 chr2 146146768 146147248 -107109335 + MER1A DNA MER1_type 4 527 0 630 316 47 20 chr2 146147908 146147936 -107108647 - LTR16A1 LTR ERVL 0 457 431 207 0 0 0 chr2 146147936 146147959 -107108624 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 630 316 47 20 chr2 146147959 146148231 -107108352 - LTR16A1 LTR ERVL -26 431 149 23 0 0 0 chr2 146148895 146148918 -107107665 + AT_rich Low_complexity Low_complexity 1 23 0 1904 98 9 98 chr2 146149134 146149462 -107107121 + AluSc SINE Alu 1 299 -10 2273 132 8 8 chr2 146149989 146150344 -107106239 + THE1A LTR MaLR 1 355 0 4290 82 11 34 chr2 146150344 146150767 -107105816 + THE1A-int LTR MaLR 1 407 -1173 2044 126 3 22 chr2 146150767 146151085 -107105498 - AluSx SINE Alu 0 312 1 4290 82 11 34 chr2 146151085 146151286 -107105297 + THE1A-int LTR MaLR 407 611 -969 507 101 0 0 chr2 146151289 146151358 -107105225 + THE1A LTR MaLR 287 355 0 255 246 0 0 chr2 146151522 146151579 -107105004 + CT-rich Low_complexity Low_complexity 4 60 0 21 0 0 0 chr2 146151810 146151831 -107104752 + AT_rich Low_complexity Low_complexity 1 21 0 213 211 0 0 chr2 146153406 146153444 -107103139 + GA-rich Low_complexity Low_complexity 2 39 0 1421 251 11 18 chr2 146153632 146154014 -107102569 - L1MA10 LINE L1 -24 6310 5932 3075 117 2 4 chr2 146154020 146154481 -107102102 - L1PA13 LINE L1 -2 6161 5702 2431 102 6 0 chr2 146154481 146154845 -107101738 + L1P4 LINE L1 5295 5660 -503 2162 170 13 0 chr2 146154840 146155222 -107101361 - L1MA10 LINE L1 -245 5944 5558 * 3874 203 52 156 chr2 146155426 146157005 -107099578 + L1MCa LINE L1 16 1757 -4669 2117 158 25 0 chr2 146157005 146157360 -107099223 - THE1B LTR MaLR 0 364 1 9029 103 38 97 chr2 146157360 146159038 -107097545 - THE1B-int LTR MaLR 0 1580 1 2224 137 31 0 chr2 146159040 146159391 -107097192 - THE1B LTR MaLR -2 362 1 3874 203 52 156 chr2 146159391 146159644 -107096939 + L1MCa LINE L1 1384 1662 -4764 350 297 59 25 chr2 146159644 146159762 -107096821 + FLAM_A SINE Alu 1 122 -11 396 139 19 9 chr2 146159766 146159874 -107096709 + (TAGA)n Simple_repeat Simple_repeat 2 110 0 291 326 37 0 chr2 146159937 146160155 -107096428 + L1MCa LINE L1 1750 1975 -4451 570 237 62 0 chr2 146160335 146160529 -107096054 + L1MCa LINE L1 2033 2238 -4188 809 300 65 38 chr2 146161811 146162326 -107094257 + L2 LINE L2 2557 3101 -212 2147 189 19 5 chr2 146162326 146162744 -107093839 + MSTB LTR MaLR 1 424 -2 809 300 65 38 chr2 146162744 146162958 -107093625 + L2 LINE L2 3101 3308 -5 287 397 8 8 chr2 146164087 146164213 -107092370 - MIR SINE MIR -60 148 23 471 202 0 0 chr2 146164687 146164776 -107091807 + L1M3 LINE L1 5377 5465 -715 23 0 0 0 chr2 146164853 146164876 -107091707 + AT_rich Low_complexity Low_complexity 1 23 0 2230 166 25 36 chr2 146164876 146165315 -107091268 - Tigger2a DNA MER2_type 0 434 1 669 261 64 11 chr2 146165573 146165903 -107090680 - L1MC/D LINE L1 -744 5402 5198 2073 117 4 0 chr2 146166350 146166651 -107089932 + AluSx SINE Alu 1 302 0 197 0 71 0 chr2 146166654 146166682 -107089901 + (CAAAT)n Simple_repeat Simple_repeat 2 31 0 482 302 85 30 chr2 146166731 146167331 -107089252 - L1MC/D LINE L1 -1898 4248 3616 769 278 146 30 chr2 146167558 146167997 -107088586 + L2 LINE L2 1933 2422 -892 674 205 19 32 chr2 146167999 146168147 -107088436 + MLT1E LTR MaLR 440 587 -6 5098 166 90 25 chr2 146168147 146169303 -107087280 + Tigger3b DNA MER2_type 1 1231 0 2270 223 128 17 chr2 146169824 146170483 -107086100 - MER44D DNA MER2_type -1 604 1 22 35 0 0 chr2 146170589 146170618 -107085965 + AT_rich Low_complexity Low_complexity 1 29 0 383 295 198 16 chr2 146171691 146172010 -107084573 + L1ME3A LINE L1 4995 5371 -775 228 277 0 0 chr2 146172010 146172057 -107084526 + polypurine Low_complexity Low_complexity 2 48 0 1576 259 119 41 chr2 146172070 146172784 -107083799 + L1ME3A LINE L1 5401 6170 0 21 89 0 0 chr2 146172731 146172787 -107083796 + AT_rich Low_complexity Low_complexity 1 56 0 * 313 278 7 42 chr2 146172787 146172931 -107083652 + L1MC5 LINE L1 7774 7912 -49 312 247 13 13 chr2 146173065 146173142 -107083441 + L2 LINE L2 3232 3308 -5 1769 211 68 30 chr2 146173169 146173643 -107082940 - LTR48B LTR ERV1 -2 642 151 332 306 19 0 chr2 146173635 146173743 -107082840 - MER34 LTR ERV1 -432 110 1 * 922 46 0 0 chr2 146174076 146174185 -107082398 + L1PA7 LINE L1 6040 6148 -6 363 78 0 0 chr2 146174467 146174518 -107082065 + (CA)n Simple_repeat Simple_repeat 2 52 0 1355 159 31 27 chr2 146174573 146174830 -107081753 - Tigger2 DNA MER2_type -10 2708 2451 2256 166 3 11 chr2 146174886 146175266 -107081317 - Tigger2 DNA MER2_type -1973 745 369 295 345 55 64 chr2 146175716 146175951 -107080632 + L2 LINE L2 2647 2879 -435 218 392 40 34 chr2 146176162 146176310 -107080273 + L2 LINE L2 3115 3263 -9 498 183 16 8 chr2 146177296 146177422 -107079161 + GA-rich Low_complexity Low_complexity 3 129 0 1688 197 21 18 chr2 146177569 146177949 -107078634 + LTR52 LTR ERVL 1 381 -40 2266 104 3 3 chr2 146178448 146178757 -107077826 + AluSp SINE Alu 1 309 -4 378 61 0 0 chr2 146178785 146178834 -107077749 + (TCCTG)n Simple_repeat Simple_repeat 2 50 0 1934 152 7 0 chr2 146178834 146179124 -107077459 - AluSx SINE Alu -20 292 1 1259 213 72 41 chr2 146179237 146179698 -107076885 - L1ME2 LINE L1 -11 6222 5748 * 1596 249 47 23 chr2 146179697 146180894 -107075689 - L1ME2 LINE L1 -1067 5148 3830 396 0 0 0 chr2 146180894 146180938 -107075645 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 1596 249 47 23 chr2 146180938 146180973 -107075610 - L1ME2 LINE L1 -2385 3830 3797 300 246 45 9 chr2 146180973 146181083 -107075500 - L1ME2 LINE L1 -2902 3313 3200 563 248 44 10 chr2 146181117 146181323 -107075260 - L1ME2 LINE L1 -3143 3072 2860 28 29 0 0 chr2 146181343 146181378 -107075205 + AT_rich Low_complexity Low_complexity 1 35 0 340 352 34 53 chr2 146181781 146182136 -107074447 - L1ME2 LINE L1 -6014 382 35 462 254 25 8 chr2 146182951 146183069 -107073514 + L3b LINE CR1 1244 1363 -220 21 36 0 0 chr2 146183278 146183306 -107073277 + AT_rich Low_complexity Low_complexity 1 28 0 207 245 139 11 chr2 146183490 146183577 -107073006 - MIR SINE MIR -63 145 53 23 33 0 0 chr2 146184373 146184403 -107072180 + AT_rich Low_complexity Low_complexity 1 30 0 245 321 100 42 chr2 146184719 146184909 -107071674 - MIR SINE MIR -14 248 48 280 229 51 85 chr2 146184972 146185090 -107071493 - L2 LINE L2 0 3272 3159 1923 171 28 71 chr2 146185365 146185827 -107070756 + MLT1C LTR MaLR 3 444 -23 326 247 21 10 chr2 146185857 146185954 -107070629 + CT-rich Low_complexity Low_complexity 3 100 0 511 325 70 12 chr2 146186964 146187207 -107069376 + MIR SINE MIR 6 262 0 4299 214 59 22 chr2 146187890 146188961 -107067622 - L1MC3 LINE L1 0 7785 6676 306 280 159 0 chr2 146189922 146190029 -107066554 + MIR SINE MIR 57 180 -82 186 118 0 0 chr2 146190275 146190309 -107066274 + (TG)n Simple_repeat Simple_repeat 1 34 0 190 342 53 26 chr2 146191783 146191859 -107064724 - L2 LINE L2 -27 3245 3168 199 328 0 16 chr2 146191929 146191993 -107064590 - L2 LINE L2 -195 3077 3015 12833 163 11 15 chr2 146191994 146194391 -107062192 - L1P LINE L1 -1029 5117 2730 6061 102 10 22 chr2 146194391 146195523 -107061060 + L1PA11 LINE L1 5055 6174 0 1202 186 147 0 chr2 146195523 146195802 -107060781 + L1M2 LINE L1 5358 5677 -614 1226 259 11 69 chr2 146196365 146196744 -107059839 - MLT1A1 LTR MaLR -8 357 1 885 183 43 62 chr2 146197338 146197546 -107059037 - MER20 DNA MER1_type 0 219 16 227 319 125 0 chr2 146198877 146198949 -107057634 + L2 LINE L2 3216 3296 -17 195 204 20 0 chr2 146199032 146199081 -107057502 + MIR SINE MIR 209 258 -4 1189 287 58 54 chr2 146199152 146199308 -107057275 + MLT1E LTR MaLR 22 176 -417 2469 46 0 0 chr2 146199308 146199615 -107056968 + AluY SINE Alu 1 307 0 1189 287 58 54 chr2 146199615 146200014 -107056569 + MLT1E LTR MaLR 176 580 -13 285 372 54 8 chr2 146200369 146200498 -107056085 - L2 LINE L2 -14 3258 3124 262 338 67 45 chr2 146200604 146200858 -107055725 - LTR16B LTR ERVL -13 451 121 476 231 0 0 chr2 146201383 146201474 -107055109 + Tigger4(Zombi) DNA MER2_type 164 254 -2477 726 122 30 15 chr2 146201476 146201607 -107054976 + Tigger4(Zombi) DNA MER2_type 2297 2429 -302 1936 143 16 16 chr2 146201614 146201922 -107054661 + AluSg SINE Alu 3 310 0 790 150 0 37 chr2 146201931 146202118 -107054465 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 210 118 0 0 chr2 146202127 146202161 -107054422 + (GGGA)n Simple_repeat Simple_repeat 4 37 0 537 121 23 38 chr2 146202164 146202296 -107054287 + GA-rich Low_complexity Low_complexity 2 131 0 1746 153 6 34 chr2 146202296 146202617 -107053966 + Tigger4(Zombi) DNA MER2_type 2420 2731 0 1529 276 54 36 chr2 146202694 146203248 -107053335 + MLT1E LTR MaLR 30 593 0 342 45 0 0 chr2 146203610 146203654 -107052929 + (CA)n Simple_repeat Simple_repeat 2 45 0 1760 195 78 27 chr2 146203683 146204094 -107052489 + MSTB1 LTR MaLR 1 432 0 385 363 56 38 chr2 146204141 146204480 -107052103 + L2 LINE L2 2521 2865 -449 243 334 62 58 chr2 146204482 146204790 -107051793 + L2 LINE L2 3005 3313 0 27 73 0 0 chr2 146205146 146205201 -107051382 + AT_rich Low_complexity Low_complexity 1 55 0 193 284 136 12 chr2 146205258 146205339 -107051244 - MIR SINE MIR -105 157 67 442 396 57 36 chr2 146205664 146206083 -107050500 + L2 LINE L2 2836 3263 -9 856 267 99 43 chr2 146206483 146207211 -107049372 - L2 LINE L2 0 3313 2471 2051 103 0 40 chr2 146209122 146209423 -107047160 - AluY SINE Alu -22 289 1 315 71 0 0 chr2 146209753 146209795 -107046788 + (CA)n Simple_repeat Simple_repeat 1 42 0 190 329 59 12 chr2 146210600 146210685 -107045898 - MIR SINE MIR -1 261 173 181 49 0 98 chr2 146211883 146211924 -107044659 + (TTTTTG)n Simple_repeat Simple_repeat 3 39 0 279 0 0 0 chr2 146212897 146212928 -107043655 + (CA)n Simple_repeat Simple_repeat 2 32 0 449 349 33 9 chr2 146213546 146213761 -107042822 + MIR SINE MIR 29 248 -14 307 357 21 36 chr2 146214097 146214237 -107042346 + L2 LINE L2 3134 3271 -1 651 304 78 36 chr2 146215705 146216037 -107040546 + L2 LINE L2 2964 3309 -4 256 202 18 18 chr2 146217477 146217591 -107038992 + (TG)n Simple_repeat Simple_repeat 1 114 0 1955 197 12 12 chr2 146218987 146219403 -107037180 + L1MB5 LINE L1 5759 6174 0 511 308 132 36 chr2 146221450 146222157 -107034426 + L2 LINE L2 2453 3313 0 181 276 235 20 chr2 146223276 146223374 -107033209 + MIR SINE MIR 21 139 -123 182 289 0 0 chr2 146223402 146223447 -107033136 + L2 LINE L2 3209 3253 -19 2080 114 24 0 chr2 146224996 146225285 -107031298 + AluSx SINE Alu 1 296 -16 208 221 39 0 chr2 146226219 146226296 -107030287 + (TA)n Simple_repeat Simple_repeat 1 80 0 744 280 163 57 chr2 146226454 146226908 -107029675 + L2 LINE L2 2804 3305 -8 201 178 0 0 chr2 146228656 146228701 -107027882 + GA-rich Low_complexity Low_complexity 2 46 0 7708 137 30 2 chr2 146229533 146230789 -107025794 - HSMAR2 DNA Mariner -2 1300 11 223 268 28 14 chr2 146231717 146231788 -107024795 - MIR SINE MIR -18 244 173 228 149 64 0 chr2 146231882 146231929 -107024654 + GA-rich Low_complexity Low_complexity 3 52 0 289 211 0 28 chr2 146231959 146232030 -107024553 + MLT1F LTR MaLR 469 537 -5 384 317 94 50 chr2 146232111 146232471 -107024112 + L2 LINE L2 2883 3258 -55 200 94 31 0 chr2 146233108 146233140 -107023443 + (CATATA)n Simple_repeat Simple_repeat 3 35 0 26 0 0 0 chr2 146233670 146233696 -107022887 + AT_rich Low_complexity Low_complexity 1 26 0 618 215 45 20 chr2 146234675 146234828 -107021755 - MLT1H LTR MaLR 0 549 404 3900 122 49 2 chr2 146234845 146235442 -107021141 - Charlie3 DNA MER1_type -4 2706 2082 238 67 0 0 chr2 146235449 146235479 -107021104 - Charlie3 DNA MER1_type -589 2121 2092 * 7587 93 17 3 chr2 146235468 146236492 -107020091 - Charlie3 DNA MER1_type -434 2276 1239 1054 134 25 0 chr2 146236490 146236647 -107019936 - Charlie3 DNA MER1_type -2549 161 1 * 435 311 51 31 chr2 146236647 146236828 -107019755 - MLT1H LTR MaLR -212 337 153 21 0 0 0 chr2 146236897 146236918 -107019665 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 146237428 146237452 -107019131 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr2 146238027 146238051 -107018532 + AT_rich Low_complexity Low_complexity 1 24 0 1547 203 49 9 chr2 146239468 146239818 -107016765 - MLT1A1 LTR MaLR 0 365 2 5638 121 25 2 chr2 146239818 146240087 -107016496 + L1PA15 LINE L1 4931 5192 -973 1558 190 57 0 chr2 146240087 146240366 -107016217 + AluJb SINE Alu 3 297 -15 5638 121 25 2 chr2 146240366 146241318 -107015265 + L1PA15 LINE L1 5192 6164 -1 22 0 0 0 chr2 146242698 146242720 -107013863 + AT_rich Low_complexity Low_complexity 1 22 0 4208 108 8 26 chr2 146244291 146244643 -107011940 - MER41B LTR ERV1 0 635 299 1826 128 49 33 chr2 146244643 146244948 -107011635 - AluSg SINE Alu 0 310 1 4208 108 8 26 chr2 146244948 146245242 -107011341 - MER41B LTR ERV1 -336 299 1 571 357 54 14 chr2 146245604 146246197 -107010386 - ERVL LTR ERVL -2861 2624 2027 333 369 60 23 chr2 146246357 146246520 -107010063 - ERVL LTR ERVL -3908 1856 1700 1800 183 30 3 chr2 146246520 146246853 -107009730 - MER2 DNA MER2_type -1 343 2 333 369 60 23 chr2 146246853 146247041 -107009542 - ERVL LTR ERVL -4064 1700 1492 2201 254 52 8 chr2 146248848 146249442 -107007141 + MLT1E2 LTR MaLR 7 626 0 1734 146 39 83 chr2 146250943 146251306 -107005277 - Tigger3(Golem) DNA MER2_type -2681 348 2 6911 48 9 4 chr2 146251424 146252645 -107003938 - L1PA5 LINE L1 -5 6149 4951 23 0 0 0 chr2 146258798 146258821 -106997762 + AT_rich Low_complexity Low_complexity 1 23 0 433 339 31 31 chr2 146259465 146259784 -106996799 + HAL1b LINE L1 410 728 -620 26 0 0 0 chr2 146260130 146260156 -106996427 + AT_rich Low_complexity Low_complexity 1 26 0 297 125 0 0 chr2 146260552 146260608 -106995975 + (TG)n Simple_repeat Simple_repeat 2 57 0 317 180 31 0 chr2 146260922 146261050 -106995533 + (TA)n Simple_repeat Simple_repeat 2 133 0 305 221 21 42 chr2 146261061 146261156 -106995427 - L1MC4 LINE L1 -1337 6705 6613 318 264 11 11 chr2 146261164 146261255 -106995328 - L1MC4 LINE L1 -1337 6705 6615 336 126 35 0 chr2 146261256 146261343 -106995240 + (TA)n Simple_repeat Simple_repeat 2 91 0 304 232 0 53 chr2 146261346 146261441 -106995142 - L1MC4 LINE L1 -1339 6703 6614 180 248 26 97 chr2 146262232 146262345 -106994238 - MER5C DNA MER1_type -140 184 80 465 246 51 29 chr2 146263210 146263348 -106993235 + MER20 DNA MER1_type 1 141 -78 26 30 0 0 chr2 146265568 146265601 -106990982 + AT_rich Low_complexity Low_complexity 1 33 0 25 0 0 0 chr2 146266324 146266349 -106990234 + AT_rich Low_complexity Low_complexity 1 25 0 3119 140 76 9 chr2 146269891 146270468 -106986115 - L1MA6 LINE L1 -24 6276 5661 183 42 0 0 chr2 146270744 146270768 -106985815 + (TCTA)n Simple_repeat Simple_repeat 3 26 0 1034 250 4 8 chr2 146271696 146271936 -106984647 - L1PB4 LINE L1 -26 6130 5892 210 171 0 0 chr2 146272526 146272561 -106984022 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 319 362 17 6 chr2 146272973 146273149 -106983434 + MIR SINE MIR 2 176 -67 25 31 0 0 chr2 146274698 146274730 -106981853 + AT_rich Low_complexity Low_complexity 1 32 0 430 301 72 38 chr2 146275071 146275280 -106981303 + MIR SINE MIR 3 218 -44 184 280 40 0 chr2 146275437 146275487 -106981096 - L2 LINE L2 0 3313 3262 235 297 45 71 chr2 146276082 146276237 -106980346 - L2 LINE L2 -940 2374 2224 626 315 98 40 chr2 146276626 146277141 -106979442 + L2 LINE L2 2752 3301 -12 27 49 0 0 chr2 146277456 146277497 -106979086 + AT_rich Low_complexity Low_complexity 1 41 0 21 0 0 0 chr2 146278426 146278447 -106978136 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr2 146281340 146281370 -106975213 + AT_rich Low_complexity Low_complexity 1 30 0 26 30 0 0 chr2 146282226 146282259 -106974324 + AT_rich Low_complexity Low_complexity 1 33 0 252 184 0 0 chr2 146283333 146283382 -106973201 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 274 312 112 16 chr2 146283670 146283795 -106972788 - MER5A DNA MER1_type -46 143 7 24 32 0 0 chr2 146283965 146283996 -106972587 + AT_rich Low_complexity Low_complexity 1 31 0 320 54 0 54 chr2 146285052 146285108 -106971475 + (A)n Simple_repeat Simple_repeat 1 53 0 265 293 121 45 chr2 146285338 146285495 -106971088 - MIR SINE MIR -28 234 66 21 36 0 0 chr2 146285621 146285649 -106970934 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 146286594 146286616 -106969967 + AT_rich Low_complexity Low_complexity 1 22 0 268 43 21 21 chr2 146287502 146287549 -106969034 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 2001 119 0 17 chr2 146287551 146287845 -106968738 - AluSg SINE Alu -21 289 1 251 204 0 0 chr2 146288880 146288934 -106967649 + (TTCA)n Simple_repeat Simple_repeat 3 56 0 214 279 144 27 chr2 146289190 146289301 -106967282 + MIR SINE MIR 37 160 -102 2046 148 0 6 chr2 146289382 146289755 -106966828 - AluSc SINE Alu 0 371 1 25 31 0 0 chr2 146289877 146289909 -106966674 + AT_rich Low_complexity Low_complexity 1 32 0 281 219 55 0 chr2 146290196 146290269 -106966314 + MLT1I LTR MaLR 314 390 -19 400 275 51 14 chr2 146291605 146291743 -106964840 - MIR SINE MIR -12 250 108 327 275 42 7 chr2 146293366 146293508 -106963075 - L1ME4a LINE L1 -76 6045 5899 873 290 18 72 chr2 146293608 146294008 -106962575 + L2 LINE L2 2936 3313 0 227 103 26 0 chr2 146294027 146294066 -106962517 + (TA)n Simple_repeat Simple_repeat 2 41 0 359 253 22 0 chr2 146294296 146294387 -106962196 - MIR3 SINE MIR -40 168 76 337 303 91 15 chr2 146295382 146295514 -106961069 - MIR SINE MIR -101 161 20 1424 196 65 14 chr2 146295914 146296205 -106960378 - AluJb SINE Alu -4 308 3 1894 190 43 22 chr2 146296339 146296915 -106959668 - MLT1B-int LTR MaLR -662 709 2 1482 161 32 93 chr2 146296919 146297207 -106959376 - MLT1B LTR MaLR -3 387 130 1929 125 6 75 chr2 146297207 146297542 -106959041 - AluSx SINE Alu 0 312 1 1482 161 32 93 chr2 146297542 146297663 -106958920 - MLT1B LTR MaLR -260 130 3 351 0 0 0 chr2 146297691 146297730 -106958853 + (TG)n Simple_repeat Simple_repeat 2 40 0 181 298 140 0 chr2 146298519 146298576 -106958007 - L3 LINE CR1 -544 1033 969 180 330 10 72 chr2 146299934 146300031 -106956552 + MIR SINE MIR 2 92 -170 1528 162 21 136 chr2 146300309 146300698 -106955885 + MER2 DNA MER2_type 2 345 0 363 23 0 0 chr2 146305238 146305282 -106951301 + (CA)n Simple_repeat Simple_repeat 1 44 0 2909 151 52 2 chr2 146308002 146308478 -106948105 + LTR3b LTR ERVK 1 500 0 26 82 0 0 chr2 146308950 146309011 -106947572 + AT_rich Low_complexity Low_complexity 1 61 0 186 250 0 0 chr2 146309548 146309588 -106946995 - L3 LINE CR1 -40 1537 1498 183 327 106 0 chr2 146309618 146309722 -106946861 - L3 LINE CR1 -177 1400 1286 217 239 46 78 chr2 146309791 146309893 -106946690 - MER5A DNA MER1_type -27 151 61 1969 125 0 71 chr2 146310292 146310629 -106945954 + AluSq SINE Alu 1 313 0 1675 237 142 31 chr2 146310629 146311014 -106945569 + L1ME3A LINE L1 5383 5724 -446 213 94 0 0 chr2 146311014 146311046 -106945537 + (CA)n Simple_repeat Simple_repeat 1 32 0 1675 237 142 31 chr2 146311046 146311364 -106945219 + L1ME3A LINE L1 5724 6164 -6 180 111 0 0 chr2 146312077 146312104 -106944479 + (TTTC)n Simple_repeat Simple_repeat 3 29 0 442 311 15 8 chr2 146315320 146315452 -106941131 - MIR SINE MIR -111 151 19 317 258 21 0 chr2 146317553 146317646 -106938937 + CT-rich Low_complexity Low_complexity 1 95 0 234 205 0 0 chr2 146317853 146317931 -106938652 + (TA)n Simple_repeat Simple_repeat 1 78 0 449 243 7 4 chr2 146318015 146318288 -106938295 + (TA)n Simple_repeat Simple_repeat 1 274 0 237 310 0 0 chr2 146318290 146318377 -106938206 + L1MC4 LINE L1 6617 6703 -1339 * 258 157 0 0 chr2 146318333 146318384 -106938199 - L1MC4 LINE L1 -1339 6703 6653 388 262 166 11 chr2 146318957 146319144 -106937439 + L2 LINE L2 3098 3313 0 21 0 0 0 chr2 146319234 146319255 -106937328 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr2 146319812 146319842 -106936741 + AT_rich Low_complexity Low_complexity 1 30 0 180 0 0 0 chr2 146320630 146320650 -106935933 + (A)n Simple_repeat Simple_repeat 1 20 0 260 305 37 0 chr2 146322375 146322457 -106934126 + L2 LINE L2 3229 3313 0 189 0 0 0 chr2 146324288 146324309 -106932274 + (TA)n Simple_repeat Simple_repeat 1 21 0 6474 43 1 1 chr2 146324309 146325095 -106931488 - L1PA5 LINE L1 -7 6147 5359 184 286 57 0 chr2 146325199 146325269 -106931314 + MIR SINE MIR 130 203 -59 300 336 83 80 chr2 146325422 146325797 -106930786 + L2 LINE L2 2892 3267 -5 287 219 31 0 chr2 146326815 146326879 -106929704 + MIR SINE MIR 47 112 -150 22 56 0 0 chr2 146327092 146327128 -106929455 + AT_rich Low_complexity Low_complexity 1 36 0 236 209 30 15 chr2 146327333 146327400 -106929183 + (TTTA)n Simple_repeat Simple_repeat 2 69 0 2046 86 7 7 chr2 146327876 146328167 -106928416 - AluY SINE Alu -20 291 1 409 304 84 37 chr2 146328572 146328786 -106927797 + MIR SINE MIR 28 251 -11 2490 295 163 32 chr2 146328812 146329071 -106927512 - L2 LINE L2 -612 2702 2478 1535 176 118 0 chr2 146329071 146329394 -106927189 + MER46B DNA MER2_type 1 236 0 2490 295 163 32 chr2 146329394 146330732 -106925851 - L2 LINE L2 -836 2478 896 361 340 40 7 chr2 146331026 146331176 -106925407 + MIR3 SINE MIR 27 181 -27 22 0 0 0 chr2 146331456 146331478 -106925105 + AT_rich Low_complexity Low_complexity 1 22 0 514 279 71 51 chr2 146333653 146333850 -106922733 + MIR SINE MIR 40 240 -22 180 111 0 0 chr2 146333870 146333897 -106922686 + (TTA)n Simple_repeat Simple_repeat 2 28 0 27 73 0 0 chr2 146333990 146334045 -106922538 + AT_rich Low_complexity Low_complexity 1 55 0 24 53 0 0 chr2 146334575 146334613 -106921970 + AT_rich Low_complexity Low_complexity 1 38 0 180 111 0 0 chr2 146334730 146334757 -106921826 + (TA)n Simple_repeat Simple_repeat 1 27 0 252 130 0 0 chr2 146334877 146334923 -106921660 + LTR66 LTR ERVL 394 439 -171 187 299 190 62 chr2 146334937 146335322 -106921261 + L2 LINE L2 1888 2321 -993 2231 252 14 23 chr2 146335488 146336007 -106920576 + MLT2B3 LTR ERVL 1 514 -40 180 200 0 0 chr2 146336007 146336047 -106920536 + (TA)n Simple_repeat Simple_repeat 2 41 0 1956 128 0 4 chr2 146336205 146336516 -106920067 - AluSg SINE Alu 0 310 1 30 0 0 0 chr2 146336605 146336635 -106919948 + AT_rich Low_complexity Low_complexity 1 30 0 19616 50 4 2 chr2 146336636 146339906 -106916677 - L1PA5 LINE L1 -8 6146 2873 224 241 0 0 chr2 146340308 146340362 -106916221 + (TTA)n Simple_repeat Simple_repeat 1 54 0 217 229 21 0 chr2 146342565 146342613 -106913970 + MIR SINE MIR 213 261 -1 22 88 0 0 chr2 146342622 146342679 -106913904 + AT_rich Low_complexity Low_complexity 1 57 0 260 305 42 54 chr2 146342840 146343079 -106913504 - L1ME LINE L1 -382 5739 5504 3029 201 6 15 chr2 146343278 146343930 -106912653 + L1PB4 LINE L1 4549 5194 -952 * 4265 154 28 11 chr2 146343909 146344657 -106911926 + L1PB4 LINE L1 5396 6156 0 27 0 0 0 chr2 146346238 146346265 -106910318 + AT_rich Low_complexity Low_complexity 1 27 0 1198 193 5 0 chr2 146348391 146348604 -106907979 - AluJb SINE Alu -12 300 87 269 233 153 44 chr2 146349571 146349707 -106906876 + MIR SINE MIR 44 192 -65 24 0 0 0 chr2 146349714 146349738 -106906845 + AT_rich Low_complexity Low_complexity 1 24 0 240 360 192 14 chr2 146350251 146350595 -106905988 - L2 LINE L2 -668 2646 2242 255 317 129 35 chr2 146351702 146351904 -106904679 + MIR SINE MIR 42 262 0 1361 128 27 2 chr2 146352477 146352701 -106903882 + L1PA12 LINE L1 5871 6098 -70 704 165 0 8 chr2 146353572 146353705 -106902878 - FLAM_C SINE Alu 0 133 2 1811 132 7 45 chr2 146353745 146354033 -106902550 + AluSx SINE Alu 7 283 -29 25 0 0 0 chr2 146354046 146354071 -106902512 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr2 146354215 146354244 -106902339 + AT_rich Low_complexity Low_complexity 1 29 0 22 80 0 0 chr2 146354393 146354443 -106902140 + AT_rich Low_complexity Low_complexity 1 50 0 240 348 0 0 chr2 146354521 146354590 -106901993 + L2 LINE L2 3245 3313 0 975 41 0 0 chr2 146356493 146356614 -106899969 + L1PA4 LINE L1 6032 6152 -3 22 0 0 0 chr2 146356813 146356835 -106899748 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 146359344 146359365 -106897218 + AT_rich Low_complexity Low_complexity 1 21 0 1669 104 97 7 chr2 146359443 146359712 -106896871 + AluSg SINE Alu 1 293 -17 216 209 0 0 chr2 146361464 146361507 -106895076 + A-rich Low_complexity Low_complexity 1 43 0 215 122 0 102 chr2 146361783 146361832 -106894751 + (CA)n Simple_repeat Simple_repeat 1 44 0 8182 132 20 17 chr2 146362242 146362931 -106893652 + L1PA10 LINE L1 3983 4668 -1495 1879 138 0 0 chr2 146362931 146363240 -106893343 + AluSx SINE Alu 14 322 0 8182 132 20 17 chr2 146363240 146363989 -106892594 + L1PA10 LINE L1 4668 5420 -743 2037 88 0 0 chr2 146364036 146364309 -106892274 + L1PA10 LINE L1 5611 5883 -285 321 26 0 0 chr2 146364672 146364710 -106891873 + (TA)n Simple_repeat Simple_repeat 1 38 0 1873 156 0 3 chr2 146364711 146364999 -106891584 - AluSq SINE Alu -26 287 1 197 311 51 43 chr2 146364999 146365114 -106891469 - MIR SINE MIR -57 151 34 405 282 196 21 chr2 146365529 146365820 -106890763 + LTR16A1 LTR ERVL 90 431 -26 828 326 133 12 chr2 146366038 146366468 -106890115 + L2 LINE L2 2823 3304 -9 228 35 0 0 chr2 146367002 146367031 -106889552 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 198 361 124 24 chr2 146367618 146367787 -106888796 + MER5A DNA MER1_type 4 189 0 234 191 0 0 chr2 146368176 146368223 -106888360 + (TG)n Simple_repeat Simple_repeat 2 48 0 22 70 0 0 chr2 146368281 146368324 -106888259 + AT_rich Low_complexity Low_complexity 1 43 0 209 260 0 0 chr2 146368350 146368400 -106888183 + (CA)n Simple_repeat Simple_repeat 2 51 0 959 308 126 16 chr2 146369016 146369594 -106886989 - L1ME3 LINE L1 -35 6127 5486 185 258 72 82 chr2 146372482 146372579 -106884004 + L3 LINE CR1 1399 1494 -83 24 32 0 0 chr2 146373650 146373681 -106882902 + AT_rich Low_complexity Low_complexity 1 31 0 513 139 0 12 chr2 146375009 146375095 -106881488 + L1P4 LINE L1 5428 5512 -656 527 332 128 29 chr2 146375419 146376191 -106880392 + L1MC4a LINE L1 4550 5398 -748 384 378 85 22 chr2 146376224 146376634 -106879949 + L1MC4a LINE L1 5460 5895 -1913 812 237 72 75 chr2 146376698 146377031 -106879552 + L1ME1 LINE L1 5744 6075 -91 246 227 149 35 chr2 146376972 146377113 -106879470 + L1MA10 LINE L1 6176 6332 -2 * 507 346 112 0 chr2 146377239 146377453 -106879130 - L2 LINE L2 -621 2693 2456 831 297 185 20 chr2 146377460 146377914 -106878669 - L2 LINE L2 -743 2571 2043 727 223 72 0 chr2 146378052 146378218 -106878365 - MER20 DNA MER1_type -1 218 41 360 363 88 21 chr2 146378255 146378630 -106877953 + L2 LINE L2 1858 2257 -1057 270 160 0 0 chr2 146378641 146378691 -106877892 + (TA)n Simple_repeat Simple_repeat 1 50 0 367 250 23 0 chr2 146378734 146378822 -106877761 - L1MC4 LINE L1 -1339 6703 6614 315 179 0 0 chr2 146378822 146378878 -106877705 - L1MC4 LINE L1 -1339 6703 6648 304 328 68 49 chr2 146378895 146379203 -106877380 + L2 LINE L2 3000 3313 0 207 176 0 0 chr2 146379707 146379741 -106876842 + (TG)n Simple_repeat Simple_repeat 1 34 0 25 0 0 0 chr2 146380391 146380416 -106876167 + AT_rich Low_complexity Low_complexity 1 25 0 204 281 78 94 chr2 146380785 146380913 -106875670 + L3 LINE CR1 579 704 -873 264 308 29 29 chr2 146381100 146381204 -106875379 - MIR3 SINE MIR -14 194 91 1329 169 109 32 chr2 146381876 146382189 -106874394 - MER1B DNA MER1_type 0 337 1 21 107 0 0 chr2 146382477 146382561 -106874022 + AT_rich Low_complexity Low_complexity 1 84 0 21 57 0 0 chr2 146384049 146384084 -106872499 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 146384756 146384777 -106871806 + AT_rich Low_complexity Low_complexity 1 21 0 301 327 207 9 chr2 146384808 146385025 -106871558 - MIR SINE MIR -2 260 1 2220 117 0 0 chr2 146385169 146385478 -106871105 - AluSg SINE Alu -1 309 1 526 135 67 10 chr2 146386371 146386475 -106870108 - L1PA13 LINE L1 0 6163 6054 205 297 133 55 chr2 146386514 146386642 -106869941 + L2 LINE L2 2921 3058 -214 22 56 0 0 chr2 146388157 146388193 -106868390 + AT_rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chr2 146390452 146390482 -106866101 + AT_rich Low_complexity Low_complexity 1 30 0 363 275 51 33 chr2 146391342 146391621 -106864962 - MER46C DNA MER2_type -2 336 9 369 326 198 24 chr2 146392742 146393370 -106863213 + L2 LINE L2 2120 2856 -458 295 355 58 70 chr2 146393423 146393891 -106862692 + L2 LINE L2 335 796 -2518 212 448 6 6 chr2 146394261 146394424 -106862159 + L2 LINE L2 1047 1209 -2105 351 0 0 0 chr2 146394464 146394503 -106862080 + (TA)n Simple_repeat Simple_repeat 1 39 0 495 376 143 14 chr2 146394701 146395414 -106861169 + L2 LINE L2 1990 2794 -520 355 276 0 13 chr2 146395453 146395529 -106861054 + Tigger5 DNA MER2_type 1 75 -2248 314 237 0 13 chr2 146395528 146395604 -106860979 - Tigger5 DNA MER2_type -6 2317 2243 * 242 359 0 43 chr2 146395957 146396049 -106860534 + L2 LINE L2 3123 3210 -62 207 0 0 0 chr2 146396084 146396107 -106860476 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 233 155 17 0 chr2 146397305 146397363 -106859220 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 27 0 0 0 chr2 146397396 146397423 -106859160 + AT_rich Low_complexity Low_complexity 1 27 0 311 314 75 67 chr2 146397617 146397856 -106858727 + L1M2 LINE L1 891 1131 -5718 233 155 17 0 chr2 146398054 146398112 -106858471 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 27 0 0 0 chr2 146398144 146398171 -106858412 + AT_rich Low_complexity Low_complexity 1 27 0 28 48 0 0 chr2 146398977 146399019 -106857564 + AT_rich Low_complexity Low_complexity 1 42 0 471 333 234 33 chr2 146399910 146401053 -106855530 - L2 LINE L2 -571 2743 1371 185 329 14 0 chr2 146403157 146403230 -106853353 - L2 LINE L2 -674 2640 2567 335 157 0 0 chr2 146403487 146403538 -106853045 + MER66A LTR ERV1 288 338 -140 21 36 0 0 chr2 146405023 146405051 -106851532 + AT_rich Low_complexity Low_complexity 1 28 0 33 66 0 0 chr2 146405310 146405371 -106851212 + AT_rich Low_complexity Low_complexity 1 61 0 27 49 0 0 chr2 146405486 146405527 -106851056 + AT_rich Low_complexity Low_complexity 1 41 0 365 394 5 0 chr2 146406040 146406233 -106850350 + MER117 DNA MER1_type 1 194 -3 25 0 0 0 chr2 146406321 146406346 -106850237 + AT_rich Low_complexity Low_complexity 1 25 0 698 190 42 7 chr2 146407514 146407656 -106848927 + FAM SINE Alu 12 158 -27 330 291 100 0 chr2 146408423 146408533 -106848050 + L2 LINE L2 3193 3313 0 240 252 129 45 chr2 146408795 146408950 -106847633 - L1MC5 LINE L1 -397 7564 7397 640 250 90 55 chr2 146408957 146409038 -106847545 - L1MC5 LINE L1 -868 6940 6863 348 24 0 0 chr2 146409038 146409079 -106847504 + (TG)n Simple_repeat Simple_repeat 2 42 0 640 250 90 55 chr2 146409079 146409486 -106847097 - L1MC5 LINE L1 -945 6863 6497 21 0 0 0 chr2 146409643 146409664 -106846919 + AT_rich Low_complexity Low_complexity 1 21 0 1997 125 3 7 chr2 146410949 146411245 -106845338 - AluSc SINE Alu -14 295 1 1799 155 10 7 chr2 146413283 146413587 -106842996 + AluSx SINE Alu 1 305 -7 21 57 0 0 chr2 146413842 146413877 -106842706 + AT_rich Low_complexity Low_complexity 1 35 0 389 283 45 72 chr2 146413879 146414144 -106842439 - MIR SINE MIR 0 262 5 212 297 27 14 chr2 146414178 146414252 -106842331 - MIR SINE MIR -114 148 74 2101 137 3 0 chr2 146415450 146415756 -106840827 + AluSx SINE Alu 1 307 -5 1688 159 95 0 chr2 146416689 146417004 -106839579 + MER7A DNA MER2_type 1 343 -3 294 29 0 0 chr2 146417158 146417193 -106839390 + (TG)n Simple_repeat Simple_repeat 2 36 0 232 297 0 0 chr2 146418107 146418198 -106838385 + G-rich Low_complexity Low_complexity 1 91 0 2188 105 3 0 chr2 146418411 146418706 -106837877 - AluSx SINE Alu -16 296 1 851 93 0 0 chr2 146419166 146419284 -106837299 - AluSg/x SINE Alu 0 309 192 5331 269 17 19 chr2 146419490 146421301 -106835282 + L1PBa LINE L1 2 1644 -5219 2404 67 0 0 chr2 146421929 146422228 -106834355 - AluY SINE Alu -7 304 6 758 322 31 4 chr2 146422406 146422661 -106833922 + MIR SINE MIR 1 262 0 5265 228 46 65 chr2 146423506 146424884 -106831699 + MLT1A1-int LTR MaLR 384 1735 0 1617 207 51 14 chr2 146424884 146425236 -106831347 + MLT1A1 LTR MaLR 1 365 0 459 342 52 26 chr2 146425555 146425786 -106830797 + MIR SINE MIR 20 256 -6 2374 74 0 6 chr2 146426121 146426433 -106830150 + AluY SINE Alu 1 310 -1 368 289 2 10 chr2 146426510 146426620 -106829963 - MIR3 SINE MIR -46 162 51 22 56 0 0 chr2 146427253 146427289 -106829294 + AT_rich Low_complexity Low_complexity 1 36 0 352 327 121 35 chr2 146427465 146427970 -106828613 + L2 LINE L2 2709 3255 -17 258 32 0 0 chr2 146427970 146428001 -106828582 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 10671 95 18 22 chr2 146428315 146429933 -106826650 - HERVH LTR ERV1 -5310 2403 793 3088 103 2 19 chr2 146429988 146430455 -106826128 - HERVH LTR ERV1 -7254 459 1 2698 81 98 5 chr2 146430457 146430865 -106825718 - LTR7 LTR ERV1 -2 448 3 21 57 0 0 chr2 146431248 146431283 -106825300 + AT_rich Low_complexity Low_complexity 1 35 0 485 266 25 80 chr2 146431357 146431556 -106825027 - MIR SINE MIR -16 246 59 1991 103 18 25 chr2 146431556 146431838 -106824745 + AluSq SINE Alu 4 283 -30 454 205 16 33 chr2 146432077 146432199 -106824384 + MER97c DNA MER1_type? 50 169 -921 366 276 74 87 chr2 146432269 146432592 -106823991 + MER113 DNA MER1_type? 203 521 0 24 91 0 0 chr2 146433686 146433752 -106822831 + AT_rich Low_complexity Low_complexity 1 66 0 21 0 0 0 chr2 146433870 146433891 -106822692 + AT_rich Low_complexity Low_complexity 1 21 0 444 298 84 34 chr2 146434526 146434788 -106821795 - L3b LINE CR1 -206 1377 1103 270 307 129 0 chr2 146435126 146435227 -106821356 + L2 LINE L2 3199 3312 -1 182 287 69 50 chr2 146435526 146435627 -106820956 + MIR SINE MIR 111 213 -49 2080 262 101 20 chr2 146436002 146436039 -106820544 - L1ME1 LINE L1 -5 6161 6128 1945 163 3 0 chr2 146436039 146436345 -106820238 - AluSx SINE Alu -5 307 1 2080 262 101 20 chr2 146436345 146437149 -106819434 - L1ME1 LINE L1 -38 6128 5254 1832 246 42 32 chr2 146437177 146437281 -106819302 - L1ME1 LINE L1 -3136 3010 2909 2026 157 0 3 chr2 146437281 146437594 -106818989 - AluSx SINE Alu 0 312 1 1832 246 42 32 chr2 146437594 146438199 -106818384 - L1ME1 LINE L1 -3237 2909 2294 7348 115 23 31 chr2 146438412 146439561 -106817022 - Charlie3 DNA MER1_type -4 2706 1568 2979 109 0 27 chr2 146439689 146440164 -106816419 + HERVH LTR ERV1 2534 2995 -4718 965 115 20 0 chr2 146440143 146440291 -106816292 + HERVH LTR ERV1 3140 3290 -4423 * 8320 111 2 5 chr2 146440281 146442006 -106814577 + HERVH LTR ERV1 3492 5273 -1818 1332 148 19 0 chr2 146442007 146442223 -106814360 + HERVH LTR ERV1 5600 5819 -1894 * 2391 98 48 13 chr2 146442221 146442600 -106813983 + HERVH LTR ERV1 7322 7713 0 2624 88 95 5 chr2 146442600 146443011 -106813572 + LTR7 LTR ERV1 1 448 -2 2068 136 3 0 chr2 146443711 146444005 -106812578 - AluSx SINE Alu -16 296 2 31 58 0 0 chr2 146444025 146444077 -106812506 + AT_rich Low_complexity Low_complexity 1 52 0 26 30 0 0 chr2 146444265 146444298 -106812285 + AT_rich Low_complexity Low_complexity 1 33 0 205 200 0 0 chr2 146444418 146444458 -106812125 + T-rich Low_complexity Low_complexity 1 40 0 2372 102 0 6 chr2 146444664 146444978 -106811605 - AluSx SINE Alu 0 312 1 198 103 0 0 chr2 146446570 146446599 -106809984 + (TC)n Simple_repeat Simple_repeat 1 29 0 192 200 0 0 chr2 146446598 146446648 -106809935 + (CA)n Simple_repeat Simple_repeat 1 50 0 * 22 0 0 0 chr2 146447217 146447239 -106809344 + AT_rich Low_complexity Low_complexity 1 22 0 470 243 18 0 chr2 146448619 146448730 -106807853 - AluJb SINE Alu -4 308 196 1365 210 29 4 chr2 146449074 146449355 -106807228 + AluJo SINE Alu 1 288 -24 31 0 0 0 chr2 146449450 146449481 -106807102 + AT_rich Low_complexity Low_complexity 1 31 0 374 184 112 64 chr2 146450320 146450445 -106806138 + AluSc SINE Alu 52 182 -117 198 336 60 47 chr2 146450723 146450872 -106805711 - MIR SINE MIR -98 164 14 323 339 57 21 chr2 146451433 146451625 -106804958 - MIR SINE MIR -16 246 48 2263 114 0 0 chr2 146452035 146452341 -106804242 - AluSx SINE Alu -6 306 1 764 223 17 29 chr2 146452883 146453058 -106803525 + MER5B DNA MER1_type 6 178 0 837 246 100 69 chr2 146453507 146453950 -106802633 + L1ME2 LINE L1 4243 4671 -1493 1762 152 10 23 chr2 146453950 146454259 -106802324 + AluSg SINE Alu 1 305 -5 837 246 100 69 chr2 146454259 146454873 -106801710 + L1ME2 LINE L1 4671 5264 -900 342 0 0 0 chr2 146454873 146454911 -106801672 + (CA)n Simple_repeat Simple_repeat 1 38 0 837 246 100 69 chr2 146454911 146455634 -106800949 + L1ME2 LINE L1 5264 6146 -18 294 325 98 1 chr2 146456056 146456174 -106800409 + MIR SINE MIR 27 149 -59 2422 102 39 58 chr2 146456185 146456598 -106799985 + MER4A LTR ERV1 1 405 -259 1329 142 0 0 chr2 146456598 146456781 -106799802 - AluSg/x SINE Alu -18 294 112 1194 147 10 30 chr2 146457037 146457234 -106799349 - AluJo SINE Alu -15 297 105 216 0 0 0 chr2 146457758 146457782 -106798801 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 189 0 0 0 chr2 146458229 146458250 -106798333 + (T)n Simple_repeat Simple_repeat 1 21 0 614 243 178 59 chr2 146458502 146458806 -106797777 - MLT1J LTR MaLR -101 410 71 305 338 50 7 chr2 146459600 146459755 -106796828 + MIR SINE MIR 16 173 -60 446 95 24 12 chr2 146459930 146460014 -106796569 - L1PB1 LINE L1 -1 6150 6066 1533 86 0 43 chr2 146460316 146460550 -106796033 - L1PA10 LINE L1 0 6168 5945 307 244 46 15 chr2 146460714 146460845 -106795738 - L1ME4a LINE L1 -211 5910 5776 805 261 0 0 chr2 146461659 146461835 -106794748 - FRAM SINE Alu -3 173 1 234 0 0 0 chr2 146462784 146462810 -106793773 + (CA)n Simple_repeat Simple_repeat 2 27 0 986 286 122 27 chr2 146463742 146464183 -106792400 + LTR16C LTR ERVL 9 491 0 5952 167 66 12 chr2 146464387 146466081 -106790502 + L1PB2 LINE L1 278 2108 -4095 2398 75 7 0 chr2 146466081 146466387 -106790196 - AluY SINE Alu -3 308 1 5952 167 66 12 chr2 146466387 146466746 -106789837 + L1PB2 LINE L1 2108 2446 -3757 * 6658 214 28 11 chr2 146466721 146468373 -106788210 + L1 LINE L1 2624 4303 -1900 33 0 0 0 chr2 146469675 146469708 -106786875 + AT_rich Low_complexity Low_complexity 1 33 0 27 62 0 0 chr2 146469902 146469950 -106786633 + AT_rich Low_complexity Low_complexity 1 48 0 183 80 0 0 chr2 146470774 146470799 -106785784 + (TG)n Simple_repeat Simple_repeat 2 26 0 523 279 124 39 chr2 146470927 146471160 -106785423 + MIR SINE MIR 10 262 0 23 33 0 0 chr2 146471992 146472022 -106784561 + AT_rich Low_complexity Low_complexity 1 30 0 2059 126 0 0 chr2 146473123 146473400 -106783183 - AluSx SINE Alu -35 277 1 271 218 7 70 chr2 146473677 146473819 -106782764 + G-rich Low_complexity Low_complexity 3 135 0 5927 175 11 6 chr2 146473937 146475955 -106780628 + L1PB2 LINE L1 4178 6206 -2 426 306 100 48 chr2 146475992 146476303 -106780280 - L2 LINE L2 -27 3286 2960 198 231 43 85 chr2 146476446 146476556 -106780027 - L2 LINE L2 -361 2911 2825 346 320 219 23 chr2 146477247 146477466 -106779117 - MIR SINE MIR 0 262 1 21 57 0 0 chr2 146478844 146478879 -106777704 + AT_rich Low_complexity Low_complexity 1 35 0 349 282 32 32 chr2 146479116 146479240 -106777343 - MIR3 SINE MIR -29 179 56 274 298 46 53 chr2 146479298 146479449 -106777134 + MIR SINE MIR 109 258 -4 287 335 84 18 chr2 146480203 146480370 -106776213 - MIR SINE MIR -13 249 72 4738 98 135 45 chr2 146481137 146482095 -106774488 + MER11A LTR ERVK 223 1266 0 10226 117 67 8 chr2 146482481 146482858 -106773725 + Charlie3 DNA MER1_type 1 354 -2352 1742 165 7 3 chr2 146482858 146483149 -106773434 + AluJb SINE Alu 1 292 -20 10226 117 67 8 chr2 146483149 146484307 -106772276 + Charlie3 DNA MER1_type 354 1626 -1080 37 39 0 0 chr2 146485664 146485715 -106770868 + AT_rich Low_complexity Low_complexity 1 51 0 2026 119 7 3 chr2 146485882 146486176 -106770407 - AluSx SINE Alu -17 295 1 379 311 82 16 chr2 146486403 146486586 -106769997 - MIR SINE MIR -19 243 49 29 60 0 0 chr2 146486737 146486787 -106769796 + AT_rich Low_complexity Low_complexity 1 50 0 1813 192 40 2 chr2 146487476 146488077 -106768506 + L1MA8 LINE L1 5030 5648 -643 1130 131 6 6 chr2 146488077 146488253 -106768330 - Tigger1 DNA MER2_type 0 2418 2243 3873 177 24 17 chr2 146488262 146489019 -106767564 - Tigger1 DNA MER2_type -1656 762 1 3370 176 6 3 chr2 146489019 146489661 -106766922 + L1MA8 LINE L1 5645 6288 -3 1721 158 4 0 chr2 146491721 146491986 -106764597 - AluJb SINE Alu -30 282 17 680 175 0 0 chr2 146492011 146492125 -106764458 + MER58B DNA MER1_type 227 340 -1 206 174 22 0 chr2 146492176 146492222 -106764361 + (TTTAA)n Simple_repeat Simple_repeat 2 48 0 352 277 54 9 chr2 146492224 146492336 -106764247 + MIR3 SINE MIR 89 205 -3 26 0 0 0 chr2 146493723 146493749 -106762834 + AT_rich Low_complexity Low_complexity 1 26 0 1945 129 7 10 chr2 146494900 146495210 -106761373 - AluSq SINE Alu -2 311 3 24 0 0 0 chr2 146495370 146495394 -106761189 + AT_rich Low_complexity Low_complexity 1 24 0 25 31 0 0 chr2 146495840 146495872 -106760711 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr2 146495954 146495976 -106760607 + AT_rich Low_complexity Low_complexity 1 22 0 355 266 282 5 chr2 146496149 146496337 -106760246 - MIR SINE MIR -21 241 2 234 277 0 0 chr2 146496990 146497055 -106759528 + T-rich Low_complexity Low_complexity 1 65 0 232 193 0 0 chr2 146498743 146498800 -106757783 + LTR66 LTR ERVL 395 451 -159 26 74 0 0 chr2 146499547 146499601 -106756982 + AT_rich Low_complexity Low_complexity 1 54 0 473 276 55 75 chr2 146500353 146500458 -106756125 - MIR SINE MIR -11 251 145 1895 137 164 16 chr2 146500458 146500831 -106755752 + MSTA LTR MaLR 1 428 0 473 276 55 75 chr2 146500831 146500979 -106755604 - MIR SINE MIR -117 145 3 764 179 117 0 chr2 146500979 146501124 -106755459 + MSTD LTR MaLR 235 396 0 1322 181 153 12 chr2 146501707 146502028 -106754555 - MSTA LTR MaLR -62 366 1 210 71 0 0 chr2 146502785 146502813 -106753770 + (T)n Simple_repeat Simple_repeat 1 28 0 215 379 33 28 chr2 146504158 146504340 -106752243 + L2 LINE L2 2490 2672 -642 247 281 34 22 chr2 146504341 146504430 -106752153 - LTR33 LTR ERVL 0 521 432 617 361 25 21 chr2 146504471 146504751 -106751832 - LTR33 LTR ERVL -195 326 46 2117 113 7 0 chr2 146505955 146506277 -106750306 + AluSx SINE Alu 1 312 0 38 0 0 0 chr2 146509209 146509247 -106747336 + AT_rich Low_complexity Low_complexity 1 38 0 865 225 10 34 chr2 146509919 146510128 -106746455 - MER3 DNA MER1_type -1 208 5 1210 225 0 21 chr2 146562431 146562720 -106693863 + AluSx SINE Alu 2 284 -28 190 95 48 0 chr2 146562733 146562775 -106693808 + (TA)n Simple_repeat Simple_repeat 2 45 0 3999 266 48 20 chr2 146563418 146564735 -106691848 + L1M4 LINE L1 1058 2439 -4659 373 337 47 7 chr2 146565011 146565287 -106691296 + L1M4 LINE L1 4765 5051 -2116 180 0 0 0 chr2 146565785 146565805 -106690778 + (TA)n Simple_repeat Simple_repeat 2 21 0 281 283 40 22 chr2 146565805 146566077 -106690506 - AluSx SINE Alu -19 283 7 22 0 0 0 chr2 146566113 146566135 -106690448 + AT_rich Low_complexity Low_complexity 1 22 0 298 77 0 0 chr2 146566341 146566380 -106690203 + (CA)n Simple_repeat Simple_repeat 2 40 0 348 24 0 0 chr2 146567242 146567283 -106689300 + (TG)n Simple_repeat Simple_repeat 2 42 0 486 281 12 6 chr2 146567289 146567453 -106689130 - AluJo SINE Alu -40 272 108 376 359 70 22 chr2 146568445 146568899 -106687684 - HAL1 LINE L1 -405 2102 1627 555 252 17 74 chr2 146570310 146570540 -106686043 - MIR SINE MIR -45 217 1 2539 55 0 0 chr2 146570811 146571119 -106685464 - AluY SINE Alu -3 308 1 253 255 147 0 chr2 146571660 146571762 -106684821 + MIR3 SINE MIR 74 190 -18 320 326 0 69 chr2 146572054 146572198 -106684385 + MIR3 SINE MIR 44 177 -31 205 335 46 46 chr2 146572676 146572828 -106683755 - MIR SINE MIR -101 161 10 23 0 0 0 chr2 146572947 146572970 -106683613 + AT_rich Low_complexity Low_complexity 1 23 0 301 366 30 34 chr2 146573780 146574015 -106682568 + L1ME LINE L1 5534 5767 -354 22 35 0 0 chr2 146574060 146574089 -106682494 + AT_rich Low_complexity Low_complexity 1 29 0 183 318 11 34 chr2 146574339 146574427 -106682156 - L3b LINE CR1 -183 1400 1315 * 322 393 54 16 chr2 146574398 146574640 -106681943 - L3 LINE CR1 -276 1301 1051 28 29 0 0 chr2 146574893 146574928 -106681655 + AT_rich Low_complexity Low_complexity 1 35 0 1192 241 56 9 chr2 146575790 146576110 -106680473 - MER2 DNA MER2_type 0 345 11 21 57 0 0 chr2 146576358 146576393 -106680190 + AT_rich Low_complexity Low_complexity 1 35 0 536 211 98 16 chr2 146576724 146576911 -106679672 + L1MD3 LINE L1 7537 7829 -166 32 26 0 0 chr2 146577213 146577252 -106679331 + AT_rich Low_complexity Low_complexity 1 39 0 2213 129 0 0 chr2 146577301 146577611 -106678972 - AluSg SINE Alu 0 310 1 21 36 0 0 chr2 146578076 146578104 -106678479 + AT_rich Low_complexity Low_complexity 1 28 0 2687 51 14 3 chr2 146578205 146578555 -106678028 - L1PA6 LINE L1 -1663 4483 4130 * 6965 60 5 2 chr2 146578552 146580207 -106676376 + L1PA6 LINE L1 4480 6141 -13 27 49 0 0 chr2 146580249 146580290 -106676293 + AT_rich Low_complexity Low_complexity 1 41 0 7099 254 67 15 chr2 146580326 146583371 -106673212 + L1PA16 LINE L1 1866 5094 -1755 4683 173 38 13 chr2 146583383 146584561 -106672022 + L1PA16 LINE L1 5653 6863 -6 25 51 0 0 chr2 146584679 146584718 -106671865 + AT_rich Low_complexity Low_complexity 1 39 0 23 0 0 0 chr2 146584832 146584855 -106671728 + AT_rich Low_complexity Low_complexity 1 23 0 23 78 0 0 chr2 146585325 146585376 -106671207 + AT_rich Low_complexity Low_complexity 1 51 0 257 242 22 55 chr2 146586210 146586301 -106670282 + L2 LINE L2 3181 3268 -45 180 152 0 0 chr2 146586450 146586483 -106670100 + (CAGAGA)n Simple_repeat Simple_repeat 4 36 0 307 314 39 59 chr2 146590993 146591299 -106665284 + L2 LINE L2 1711 2010 -1304 221 378 0 20 chr2 146591428 146591526 -106665057 + L2 LINE L2 2225 2320 -994 300 309 31 37 chr2 146591639 146591780 -106664803 + L2 LINE L2 2696 2837 -477 2147 109 0 40 chr2 146591780 146592102 -106664481 - AluSc SINE Alu 0 309 1 300 309 31 37 chr2 146592102 146592122 -106664461 + L2 LINE L2 2837 2856 -458 228 67 0 0 chr2 146592337 146592367 -106664216 + (TA)n Simple_repeat Simple_repeat 2 31 0 379 355 22 0 chr2 146592718 146592856 -106663727 - MIR SINE MIR -109 153 13 228 289 83 127 chr2 146594151 146594404 -106662179 - MIR SINE MIR 0 262 21 601 274 70 6 chr2 146594410 146594567 -106662016 + MER58C DNA MER1_type 3 169 -46 839 114 0 16 chr2 146595667 146595790 -106660793 + FLAM_C SINE Alu 23 143 0 24 67 0 0 chr2 146596226 146596271 -106660312 + AT_rich Low_complexity Low_complexity 1 45 0 2043 117 7 0 chr2 146596344 146596695 -106659888 + AluY SINE Alu 1 353 0 1575 175 4 4 chr2 146597678 146597958 -106658625 - L1PA16 LINE L1 -11 6155 5876 24 0 0 0 chr2 146598115 146598139 -106658444 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 146601110 146601131 -106655452 + AT_rich Low_complexity Low_complexity 1 21 0 24 85 0 0 chr2 146601546 146601605 -106654978 + AT_rich Low_complexity Low_complexity 1 59 0 1769 263 69 36 chr2 146601930 146602642 -106653941 + L1MEc LINE L1 37 771 -5625 447 232 101 6 chr2 146602663 146602831 -106653752 + L1MEc LINE L1 3096 3279 -2936 1603 231 175 23 chr2 146602839 146603484 -106653099 + L1MEc LINE L1 3841 4583 -1632 268 220 0 0 chr2 146603514 146603573 -106653010 - L1MB4 LINE L1 -33 6147 6089 417 100 0 0 chr2 146603584 146603644 -106652939 - L1PA13 LINE L1 -19 6144 6085 327 153 17 0 chr2 146603650 146603709 -106652874 - L1PA13 LINE L1 -19 6144 6085 382 133 0 0 chr2 146603715 146603775 -106652808 - L1PA13 LINE L1 -19 6144 6085 10223 179 36 9 chr2 146603781 146605452 -106651131 - L1PA13 LINE L1 -19 6144 4519 318 26 0 0 chr2 146605452 146605491 -106651092 + (TG)n Simple_repeat Simple_repeat 2 40 0 10223 179 36 9 chr2 146605491 146605802 -106650781 - L1PA13 LINE L1 -1644 4519 4218 2694 96 3 8 chr2 146605802 146606179 -106650404 - THE1C LTR MaLR 0 375 1 10223 179 36 9 chr2 146606179 146607071 -106649512 - L1PA13 LINE L1 -1945 4218 3187 24 35 0 53 chr2 146607277 146607334 -106649249 + AT_rich Low_complexity Low_complexity 1 54 0 292 299 86 40 chr2 146607549 146607723 -106648860 - MIR SINE MIR -49 213 32 263 255 85 43 chr2 146607729 146607870 -106648713 - MIR SINE MIR -37 225 79 2156 109 0 28 chr2 146608093 146608413 -106648170 + AluSx SINE Alu 2 312 0 518 253 175 0 chr2 146608568 146608722 -106647861 - MER5A DNA MER1_type 0 189 9 1706 90 24 8 chr2 146609314 146609569 -106647014 - L1PA7 LINE L1 0 6154 5896 1559 196 39 44 chr2 146610266 146610628 -106645955 + MLT1A2 LTR MaLR 4 363 -11 25 31 0 0 chr2 146610658 146610690 -106645893 + AT_rich Low_complexity Low_complexity 1 32 0 215 350 78 61 chr2 146610807 146611153 -106645430 - L2 LINE L2 -337 2977 2626 415 320 86 0 chr2 146611304 146611479 -106645104 - MIR SINE MIR 0 262 73 34 24 0 0 chr2 146612704 146612745 -106643838 + AT_rich Low_complexity Low_complexity 1 41 0 243 0 0 0 chr2 146612874 146612901 -106643682 + (CA)n Simple_repeat Simple_repeat 2 28 0 364 305 7 14 chr2 146613071 146613212 -106643371 - LTR33 LTR ERVL 0 521 382 217 317 17 0 chr2 146613545 146613605 -106642978 + MIR SINE MIR 90 150 -58 354 98 0 0 chr2 146614297 146614348 -106642235 + (TG)n Simple_repeat Simple_repeat 1 51 0 252 309 95 9 chr2 146614832 146615017 -106641566 + MIR SINE MIR 3 262 0 282 227 72 41 chr2 146615560 146615657 -106640926 + LTR48B LTR ERV1 5 104 -540 * 1156 229 77 66 chr2 146615630 146616127 -106640456 + MER39 LTR ERV1 219 707 0 591 351 87 35 chr2 146616887 146617438 -106639145 + L2 LINE L2 2700 3277 -36 725 321 66 16 chr2 146617438 146617862 -106638721 + L1PA8A LINE L1 5364 5808 -323 * 2876 245 111 21 chr2 146617481 146618112 -106638471 + L1MC4a LINE L1 5404 5977 -1831 1809 150 17 7 chr2 146618112 146618412 -106638171 + AluJb SINE Alu 5 307 -5 2876 245 111 21 chr2 146618412 146619960 -106636623 + L1MC4a LINE L1 5977 7802 -6 620 249 27 9 chr2 146620002 146620365 -106636218 + L1M4 LINE L1 4417 4940 -1206 3329 169 46 8 chr2 146620448 146621058 -106635525 + MER39 LTR ERV1 75 707 0 1185 266 58 11 chr2 146621127 146621590 -106634993 + L1M4 LINE L1 3561 4045 -2101 437 268 13 65 chr2 146621836 146622034 -106634549 + L1MC5 LINE L1 7712 7898 -63 1988 136 16 16 chr2 146622034 146622067 -106634516 - AluSx SINE Alu 0 312 280 198 0 0 0 chr2 146622067 146622089 -106634494 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1988 136 16 16 chr2 146622089 146622363 -106634220 - AluSx SINE Alu -31 281 5 437 268 13 65 chr2 146622363 146622395 -106634188 + L1MC5 LINE L1 7898 7930 -31 24 0 0 0 chr2 146622395 146622419 -106634164 + AT_rich Low_complexity Low_complexity 1 24 0 348 94 0 0 chr2 146622624 146622677 -106633906 + (CA)n Simple_repeat Simple_repeat 1 53 0 30 0 0 0 chr2 146624610 146624640 -106631943 + AT_rich Low_complexity Low_complexity 1 30 0 3917 208 6 59 chr2 146625046 146625983 -106630600 + L1M2a LINE L1 6 893 -6275 664 224 23 131 chr2 146625994 146626253 -106630330 + L1M2a LINE L1 603 890 -6278 * 9289 202 38 12 chr2 146626238 146632248 -106624335 + L1MA5 LINE L1 674 6890 -431 414 0 0 0 chr2 146632248 146632294 -106624289 + (TAAAA)n Simple_repeat Simple_repeat 5 50 0 9289 202 38 12 chr2 146632294 146632732 -106623851 + L1MA5 LINE L1 6890 7315 -6 2172 110 10 10 chr2 146635095 146635404 -106621179 + AluSc SINE Alu 1 309 0 1605 89 0 0 chr2 146636656 146636859 -106619724 + AluSc SINE Alu 1 203 -106 1595 177 13 30 chr2 146636875 146637175 -106619408 - AluJo SINE Alu -15 297 3 731 266 118 46 chr2 146637891 146638099 -106618484 + L2 LINE L2 2841 3032 -281 835 46 0 0 chr2 146638099 146638208 -106618375 + L1PA4 LINE L1 6047 6155 0 731 266 118 46 chr2 146638208 146638371 -106618212 + L2 LINE L2 3032 3239 -74 247 277 12 24 chr2 146638470 146638553 -106618030 + GA-rich Low_complexity Low_complexity 2 83 0 1597 215 63 27 chr2 146638605 146639015 -106617568 - LTR68 LTR ERV1 -3 737 313 2221 104 3 0 chr2 146639015 146639324 -106617259 + AluSx SINE Alu 1 310 -2 247 261 75 65 chr2 146639499 146639698 -106616885 + LTR40a LTR ERVL 319 519 0 417 236 161 125 chr2 146640992 146641415 -106615168 + MER113 DNA MER1_type? 36 473 -48 412 321 82 6 chr2 146641661 146641820 -106614763 - MER5B DNA MER1_type -6 172 2 1268 197 57 109 chr2 146641887 146642272 -106614311 + MLT1A1 LTR MaLR 1 365 0 1965 157 3 3 chr2 146642618 146642930 -106613653 - AluSx SINE Alu 0 312 1 27 81 0 0 chr2 146643467 146643529 -106613054 + AT_rich Low_complexity Low_complexity 1 62 0 198 0 0 0 chr2 146643842 146643864 -106612719 + (TA)n Simple_repeat Simple_repeat 2 23 0 277 262 84 19 chr2 146644671 146644778 -106611805 - MIR SINE MIR -56 206 93 199 280 98 15 chr2 146644988 146645080 -106611503 - MIR SINE MIR -18 190 79 3554 201 113 125 chr2 146645541 146647113 -106609470 + L1MD1 LINE L1 19 1737 -4803 605 176 14 28 chr2 146647113 146647251 -106609332 + L1MA7 LINE L1 6152 6291 0 3554 201 113 125 chr2 146647251 146647913 -106608670 + L1MD1 LINE L1 1737 2406 -4134 1136 287 70 6 chr2 146647994 146648138 -106608445 + L1MD1 LINE L1 5152 5285 -1255 2054 90 23 20 chr2 146648138 146648437 -106608146 + AluSg SINE Alu 1 300 -10 1136 287 70 6 chr2 146648437 146648791 -106607792 + L1MD1 LINE L1 5285 5682 -858 * 1852 220 19 7 chr2 146648777 146649190 -106607393 + L1MD1 LINE L1 5917 6334 -302 1596 184 6 9 chr2 146649230 146649551 -106607032 + L1MD1 LINE L1 6316 6635 -1 502 145 40 0 chr2 146649688 146649812 -106606771 + (TA)n Simple_repeat Simple_repeat 2 130 0 1401 210 63 42 chr2 146649850 146650005 -106606578 + MLT1B LTR MaLR 2 152 -238 249 33 0 0 chr2 146650005 146650035 -106606548 + (TC)n Simple_repeat Simple_repeat 1 30 0 1401 210 63 42 chr2 146650035 146650260 -106606323 + MLT1B LTR MaLR 152 390 0 1580 278 60 30 chr2 146650972 146651728 -106604855 + MER20B DNA MER1_type 4 781 -3 234 200 70 20 chr2 146651742 146651809 -106604774 + MIR SINE MIR 75 144 -64 234 152 61 15 chr2 146652096 146652162 -106604421 + (TAGA)n Simple_repeat Simple_repeat 1 69 0 844 211 11 11 chr2 146652210 146652390 -106604193 + AluJo SINE Alu 99 278 -34 348 24 0 0 chr2 146652390 146652431 -106604152 + (CA)n Simple_repeat Simple_repeat 2 42 0 23 54 0 0 chr2 146653229 146653266 -106603317 + AT_rich Low_complexity Low_complexity 1 37 0 1999 109 35 3 chr2 146653439 146653724 -106602859 - AluSx SINE Alu -18 294 1 377 300 15 0 chr2 146653783 146653913 -106602670 - MER103 DNA DNA -30 136 5 450 0 0 0 chr2 146654542 146654592 -106601991 + (TA)n Simple_repeat Simple_repeat 2 51 0 302 92 25 80 chr2 146655137 146655220 -106601363 + L1PA16 LINE L1 6073 6153 -3 22 94 0 0 chr2 146655361 146655425 -106601158 + AT_rich Low_complexity Low_complexity 1 64 0 609 306 70 18 chr2 146656148 146656377 -106600206 + MIR SINE MIR 7 247 -15 25 51 0 0 chr2 146656511 146656550 -106600033 + AT_rich Low_complexity Low_complexity 1 39 0 215 315 0 0 chr2 146657023 146657077 -106599506 - MIR SINE MIR -123 139 86 686 272 40 0 chr2 146657146 146657319 -106599264 + MER58A DNA MER1_type 35 214 -10 348 338 84 13 chr2 146659194 146659348 -106597235 - MIR3 SINE MIR -6 202 38 23 92 0 0 chr2 146659448 146659513 -106597070 + AT_rich Low_complexity Low_complexity 1 65 0 234 0 0 0 chr2 146660223 146660249 -106596334 + (T)n Simple_repeat Simple_repeat 1 26 0 227 259 27 45 chr2 146660281 146660393 -106596190 - L1ME LINE L1 -218 5903 5794 23 0 0 0 chr2 146661328 146661351 -106595232 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 146663287 146663310 -106593273 + AT_rich Low_complexity Low_complexity 1 23 0 280 192 0 0 chr2 146664105 146664157 -106592426 + LTR65 LTR ERV1 21 72 -597 * 2404 140 6 3 chr2 146664156 146664514 -106592069 + THE1B LTR MaLR 6 364 0 1711 227 72 24 chr2 146664515 146664974 -106591609 + LTR65 LTR ERV1 69 549 -120 338 151 0 47 chr2 146664978 146665084 -106591499 + CT-rich Low_complexity Low_complexity 4 104 0 339 262 115 0 chr2 146665124 146665246 -106591337 + LTR65 LTR ERV1 501 636 -33 2817 238 91 29 chr2 146665246 146665481 -106591102 + L1MB8 LINE L1 3923 4142 -2036 210 37 0 0 chr2 146665481 146665508 -106591075 + (GA)n Simple_repeat Simple_repeat 2 28 0 2817 238 91 29 chr2 146665508 146667069 -106589514 + L1MB8 LINE L1 4142 5842 -336 243 0 0 0 chr2 146667088 146667115 -106589468 + (CA)n Simple_repeat Simple_repeat 2 28 0 202 222 0 0 chr2 146667121 146667157 -106589426 + (TATATG)n Simple_repeat Simple_repeat 3 38 0 38 22 0 0 chr2 146667448 146667493 -106589090 + AT_rich Low_complexity Low_complexity 1 45 0 185 0 40 0 chr2 146668193 146668218 -106588365 + (CAA)n Simple_repeat Simple_repeat 2 27 0 255 31 0 0 chr2 146668278 146668310 -106588273 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 705 349 147 34 chr2 146668767 146669552 -106587031 + L2 LINE L2 2104 2976 -338 354 294 95 8 chr2 146669661 146669787 -106586796 + L2 LINE L2 3136 3272 0 735 251 21 109 chr2 146669925 146670047 -106586536 + MIR SINE MIR 5 89 -173 2038 79 50 0 chr2 146670047 146670326 -106586257 - AluY SINE Alu -18 293 1 735 251 21 109 chr2 146670326 146670486 -106586097 + MIR SINE MIR 89 262 0 229 304 0 11 chr2 146672444 146672536 -106584047 + CT-rich Low_complexity Low_complexity 4 94 0 583 154 19 0 chr2 146672554 146672658 -106583925 - MER67A LTR ERV1 -314 229 124 240 177 32 0 chr2 146672674 146672736 -106583847 + (TA)n Simple_repeat Simple_repeat 1 64 0 609 170 0 0 chr2 146672747 146672912 -106583671 + (TA)n Simple_repeat Simple_repeat 1 165 0 2358 203 13 89 chr2 146673006 146673714 -106582869 + MER67B LTR ERV1 1 502 -41 2020 227 58 52 chr2 146674300 146674987 -106581596 + LTR8 LTR ERV1 1 691 0 24 67 0 0 chr2 146676139 146676184 -106580399 + AT_rich Low_complexity Low_complexity 1 45 0 242 222 0 0 chr2 146676547 146676592 -106579991 - MIR SINE MIR -13 249 205 203 216 20 0 chr2 146677659 146677710 -106578873 + A-rich Low_complexity Low_complexity 2 53 0 369 0 0 0 chr2 146678531 146678572 -106578011 + (CA)n Simple_repeat Simple_repeat 2 42 0 264 254 101 72 chr2 146678985 146679194 -106577389 + MIR SINE MIR 48 262 0 2223 99 3 16 chr2 146680556 146680870 -106575713 + AluY SINE Alu 1 310 -1 2050 130 0 0 chr2 146683093 146683377 -106573206 + AluSx SINE Alu 1 284 -28 202 73 49 0 chr2 146683390 146683431 -106573152 + (TA)n Simple_repeat Simple_repeat 1 43 0 296 197 26 66 chr2 146684064 146684140 -106572443 + FRAM SINE Alu 71 143 -23 553 316 199 11 chr2 146684285 146684741 -106571842 - L2 LINE L2 -245 3068 2521 5966 178 23 5 chr2 146684798 146686000 -106570583 + L1MC1 LINE L1 5101 6325 -8 438 253 68 68 chr2 146686113 146686303 -106570280 + L1MC4a LINE L1 5127 5316 -830 2010 104 53 197 chr2 146686643 146687172 -106569411 + MLT2A2 LTR ERVL 1 453 0 2206 72 3 26 chr2 146687706 146688010 -106568573 + AluY SINE Alu 1 297 -14 2011 127 132 34 chr2 146688164 146688508 -106568075 + MSTA LTR MaLR 4 392 -36 1686 177 0 44 chr2 146688508 146688824 -106567759 - AluSx SINE Alu -9 303 2 2011 127 132 34 chr2 146688824 146688866 -106567717 + MSTA LTR MaLR 392 428 0 402 262 96 26 chr2 146688867 146689096 -106567487 + L1MC4a LINE L1 5603 5809 -312 974 211 0 0 chr2 146689533 146689718 -106566865 + MER5A DNA MER1_type 3 187 -2 3854 247 47 27 chr2 146689771 146692238 -106564345 + L1MCb LINE L1 4 2700 -4045 2283 103 0 3 chr2 146692238 146692550 -106564033 + AluY SINE Alu 1 311 0 3854 247 47 27 chr2 146692550 146692641 -106563942 + L1MCb LINE L1 2700 2788 -3957 3447 248 48 17 chr2 146692618 146693763 -106562820 + L1MCb LINE L1 3236 4416 -2148 * 3299 211 33 25 chr2 146693838 146694568 -106562015 + L1MC3 LINE L1 7032 7767 -18 491 306 82 15 chr2 146694583 146694779 -106561804 + MIR SINE MIR 53 261 -1 22 80 0 0 chr2 146694885 146694935 -106561648 + AT_rich Low_complexity Low_complexity 1 50 0 21 36 0 0 chr2 146696098 146696126 -106560457 + AT_rich Low_complexity Low_complexity 1 28 0 278 265 0 6 chr2 146698191 146698353 -106558230 + (TA)n Simple_repeat Simple_repeat 2 162 0 904 304 72 28 chr2 146699072 146699449 -106557134 + L2 LINE L2 2628 2987 -326 2068 45 48 7 chr2 146699449 146699748 -106556835 - AluY SINE Alu 0 310 1 904 304 72 28 chr2 146699748 146699841 -106556742 + L2 LINE L2 2987 3074 -239 2442 37 40 0 chr2 146699841 146700140 -106556443 - AluY SINE Alu 0 311 1 904 304 72 28 chr2 146700140 146700324 -106556259 + L2 LINE L2 3074 3312 -1 253 302 0 52 chr2 146701039 146701135 -106555448 + L2 LINE L2 3138 3228 -44 2351 45 0 10 chr2 146702017 146702336 -106554247 + AluY SINE Alu 1 316 0 1544 188 6 46 chr2 146703846 146704171 -106552412 - AluJo SINE Alu 0 312 1 2542 52 3 0 chr2 146704989 146705296 -106551287 - AluY SINE Alu -3 308 1 23 0 0 0 chr2 146705443 146705466 -106551117 + AT_rich Low_complexity Low_complexity 1 23 0 180 307 191 31 chr2 146705546 146705771 -106550812 - L3 LINE CR1 -242 1335 1075 292 305 142 8 chr2 146705881 146706009 -106550574 - MIR SINE MIR -74 134 19 213 246 12 23 chr2 146706230 146706401 -106550182 + (TA)n Simple_repeat Simple_repeat 2 170 0 26 0 0 0 chr2 146706688 146706714 -106549869 + AT_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr2 146706812 146706835 -106549748 + AT_rich Low_complexity Low_complexity 1 23 0 186 231 0 0 chr2 146706861 146706900 -106549683 - L2 LINE L2 0 3313 3275 519 244 34 0 chr2 146706911 146707030 -106549553 + MER94 DNA DNA 10 132 -2 6030 58 1 0 chr2 146707147 146707905 -106548678 + L1PA5 LINE L1 5392 6150 -4 316 354 200 8 chr2 146708095 146708485 -106548098 - L2 LINE L2 -338 2976 2512 21 0 0 0 chr2 146709615 146709636 -106546947 + AT_rich Low_complexity Low_complexity 1 21 0 2165 106 0 0 chr2 146709756 146710107 -106546476 - AluSx SINE Alu 0 351 1 2837 18 0 0 chr2 146710643 146710971 -106545612 + L1PA2 LINE L1 5825 6152 -3 186 43 0 0 chr2 146710985 146711008 -106545575 + (A)n Simple_repeat Simple_repeat 1 23 0 22 70 0 0 chr2 146712383 146712426 -106544157 + AT_rich Low_complexity Low_complexity 1 43 0 313 278 19 28 chr2 146712448 146712556 -106544027 + HAL1 LINE L1 836 942 -1565 468 210 83 13 chr2 146712571 146712728 -106543855 + HAL1 LINE L1 1009 1176 -1331 477 269 87 81 chr2 146712787 146713202 -106543381 + HAL1 LINE L1 1952 2372 -135 2323 107 0 0 chr2 146713202 146713511 -106543072 + AluSq SINE Alu 1 309 -4 477 269 87 81 chr2 146713511 146713648 -106542935 + HAL1 LINE L1 2372 2507 0 235 205 60 0 chr2 146713649 146713732 -106542851 + L1ME4a LINE L1 6028 6115 -6 183 80 0 0 chr2 146714482 146714507 -106542076 + (TA)n Simple_repeat Simple_repeat 1 25 0 21 71 0 0 chr2 146714618 146714660 -106541923 + AT_rich Low_complexity Low_complexity 1 42 0 2303 70 0 3 chr2 146715121 146715421 -106541162 + AluY SINE Alu 2 300 -11 186 103 0 0 chr2 146716978 146717007 -106539576 + (TGGA)n Simple_repeat Simple_repeat 1 29 0 342 250 68 0 chr2 146717008 146717096 -106539487 + L1MC4 LINE L1 6610 6703 -1339 339 239 65 11 chr2 146717054 146717146 -106539437 - L1MC4 LINE L1 -1339 6703 6607 * 279 278 31 88 chr2 146717242 146717469 -106539114 + L1MC5 LINE L1 7694 7907 -54 26 50 0 0 chr2 146717927 146717967 -106538616 + AT_rich Low_complexity Low_complexity 1 40 0 252 0 0 0 chr2 146718144 146718172 -106538411 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 252 0 0 0 chr2 146718559 146718587 -106537996 + (T)n Simple_repeat Simple_repeat 1 28 0 769 342 63 13 chr2 146719786 146720260 -106536323 - HAL1 LINE L1 -383 2124 1627 1719 171 0 23 chr2 146720836 146721140 -106535443 + AluJb SINE Alu 1 297 -15 5340 162 16 32 chr2 146722842 146723821 -106532762 - Tigger1 DNA MER2_type -1453 965 2 23 0 0 0 chr2 146723962 146723985 -106532598 + AT_rich Low_complexity Low_complexity 1 23 0 26 30 0 0 chr2 146724180 146724213 -106532370 + AT_rich Low_complexity Low_complexity 1 33 0 1905 137 0 4 chr2 146725453 146725730 -106530853 - AluSg SINE Alu -14 296 21 284 0 28 0 chr2 146725759 146725795 -106530788 + (CA)n Simple_repeat Simple_repeat 2 38 0 194 295 168 0 chr2 146726589 146726684 -106529899 + L2 LINE L2 3202 3312 -1 2440 65 7 0 chr2 146727488 146727797 -106528786 + AluY SINE Alu 1 311 0 21 0 0 0 chr2 146728291 146728312 -106528271 + AT_rich Low_complexity Low_complexity 1 21 0 321 26 0 0 chr2 146728513 146728551 -106528032 + (A)n Simple_repeat Simple_repeat 1 38 0 22 35 0 0 chr2 146728828 146728857 -106527726 + AT_rich Low_complexity Low_complexity 1 29 0 204 368 51 17 chr2 146729283 146729400 -106527183 + MIR SINE MIR 20 140 -68 626 313 133 25 chr2 146730446 146730845 -106525738 + HAL1 LINE L1 54 495 -2012 274 272 56 16 chr2 146731058 146731183 -106525400 + HAL1 LINE L1 2272 2401 -106 1878 236 43 41 chr2 146731254 146731439 -106525144 - MLT1D LTR MaLR 0 505 322 2265 68 0 4 chr2 146731439 146731720 -106524863 + AluY SINE Alu 1 305 0 186 0 40 0 chr2 146731720 146731745 -106524838 + (CAAA)n Simple_repeat Simple_repeat 1 52 0 1878 236 43 41 chr2 146731745 146732050 -106524533 - MLT1D LTR MaLR -183 322 13 2758 236 24 126 chr2 146732069 146732406 -106524177 - MLT1D-int LTR MaLR -9 1362 992 2264 96 7 0 chr2 146732406 146732708 -106523875 + AluSg SINE Alu 1 304 -6 2758 236 24 126 chr2 146732708 146733859 -106522724 - MLT1D-int LTR MaLR -379 992 42 3833 177 77 19 chr2 146733859 146734138 -106522445 + MER4D LTR ERV1 1 262 -641 2236 105 0 3 chr2 146734138 146734442 -106522141 - AluSx SINE Alu -1 311 9 3833 177 77 19 chr2 146734442 146735015 -106521568 + MER4D LTR ERV1 262 903 0 2758 236 24 126 chr2 146735015 146735054 -106521529 - MLT1D-int LTR MaLR -1329 42 1 1132 219 171 45 chr2 146735055 146735430 -106521153 - MLT1D LTR MaLR -2 503 82 606 233 37 31 chr2 146735346 146735509 -106521074 - MLT2C1 LTR ERVL -233 164 1 * 1060 183 10 40 chr2 146735775 146735977 -106520606 + AluJo SINE Alu 87 282 -30 225 175 63 32 chr2 146735986 146736049 -106520534 + L1MC4 LINE L1 6640 6704 -1338 269 304 0 0 chr2 146737044 146737113 -106519470 - L2 LINE L2 -13 3300 3232 2157 112 0 10 chr2 146737791 146738095 -106518488 + AluSq SINE Alu 1 301 -12 581 292 32 0 chr2 146738166 146738320 -106518263 - MIR SINE MIR -96 166 8 1736 187 15 57 chr2 146738824 146738972 -106517611 - MLT1B LTR MaLR 0 390 237 2008 118 3 16 chr2 146738972 146739278 -106517305 - AluSx SINE Alu -10 302 1 1736 187 15 57 chr2 146739278 146739536 -106517047 - MLT1B LTR MaLR -153 237 1 710 267 33 96 chr2 146739903 146740008 -106516575 + PABL_B LTR ERV1 66 176 -491 1042 117 207 0 chr2 146740008 146740099 -106516484 - MER30 DNA MER1_type 0 230 159 462 53 13 26 chr2 146740099 146740175 -106516408 + (TTTA)n Simple_repeat Simple_repeat 2 76 0 1042 117 207 0 chr2 146740175 146740271 -106516312 - MER30 DNA MER1_type -71 159 4 710 267 33 96 chr2 146740271 146740612 -106515971 + PABL_B LTR ERV1 176 641 -26 228 67 0 0 chr2 146742874 146742904 -106513679 + (TG)n Simple_repeat Simple_repeat 1 30 0 254 143 0 0 chr2 146743281 146743323 -106513260 + MADE1 DNA Mariner 2 43 -37 318 102 0 0 chr2 146744150 146744199 -106512384 + MADE1 DNA Mariner 32 80 0 547 279 46 68 chr2 146745537 146745774 -106510809 - MIR SINE MIR -26 236 5 38 22 0 0 chr2 146746684 146746729 -106509854 + AT_rich Low_complexity Low_complexity 1 45 0 489 272 189 45 chr2 146748758 146749229 -106507354 + MLT1H LTR MaLR 9 547 -2 28 29 0 0 chr2 146749258 146749293 -106507290 + AT_rich Low_complexity Low_complexity 1 35 0 2820 123 12 2 chr2 146749307 146749737 -106506846 + MER57B LTR ERV1 1 434 0 860 245 43 101 chr2 146750183 146750747 -106505836 + MER34 LTR ERV1 12 542 0 2044 98 3 54 chr2 146751391 146751707 -106504876 + AluSp SINE Alu 1 300 -13 361 209 130 26 chr2 146752246 146752361 -106504222 - L1MD3 LINE L1 -13 7982 7856 338 284 37 15 chr2 146752574 146752708 -106503875 - L1ME LINE L1 -480 5641 5505 324 295 98 51 chr2 146752895 146753499 -106503084 - L1ME LINE L1 -891 5255 4624 906 198 0 0 chr2 146753521 146753678 -106502905 - FRAM SINE Alu -14 162 6 230 291 82 11 chr2 146753687 146753869 -106502714 - L1ME LINE L1 -1537 4609 4415 1817 163 0 0 chr2 146753933 146754209 -106502374 - AluSx SINE Alu -36 276 1 553 313 93 59 chr2 146754493 146755155 -106501428 - L1MEd LINE L1 -826 1664 861 23 33 0 0 chr2 146755820 146755850 -106500733 + AT_rich Low_complexity Low_complexity 1 30 0 188 256 0 0 chr2 146756024 146756063 -106500520 + MIR SINE MIR 215 253 -9 1746 186 46 15 chr2 146756752 146757079 -106499504 + MER1B DNA MER1_type 1 337 0 183 129 0 0 chr2 146757604 146757635 -106498948 + (TA)n Simple_repeat Simple_repeat 2 32 0 2356 160 34 4 chr2 146757676 146758144 -106498439 + L1MB4 LINE L1 5680 6161 -19 306 180 56 0 chr2 146758189 146758270 -106498313 + L1MB8 LINE L1 6093 6179 -5 3859 200 45 14 chr2 146758445 146759361 -106497222 - Charlie1 DNA MER1_type -1 2760 1817 268 75 45 30 chr2 146759965 146760032 -106496551 + (TA)n Simple_repeat Simple_repeat 1 68 0 22 56 0 0 chr2 146760956 146760992 -106495591 + AT_rich Low_complexity Low_complexity 1 36 0 266 376 75 61 chr2 146762988 146763267 -106493316 + L2 LINE L2 2933 3215 -57 2823 167 78 0 chr2 146763835 146764361 -106492222 - L1PA16 LINE L1 -104 6062 5496 23 68 0 0 chr2 146764483 146764527 -106492056 + AT_rich Low_complexity Low_complexity 1 44 0 434 158 0 0 chr2 146765102 146765178 -106491405 - MADE1 DNA Mariner -1 79 4 2064 129 7 3 chr2 146765443 146765752 -106490831 + AluSx SINE Alu 3 312 0 22 35 0 0 chr2 146765802 146765831 -106490752 + AT_rich Low_complexity Low_complexity 1 29 0 342 0 0 0 chr2 146766597 146766635 -106489948 + (A)n Simple_repeat Simple_repeat 1 38 0 23 33 0 0 chr2 146767554 146767584 -106488999 + AT_rich Low_complexity Low_complexity 1 30 0 264 254 202 18 chr2 146769077 146769191 -106487392 - L2 LINE L2 0 3313 3179 234 128 0 0 chr2 146769578 146769617 -106486966 + (TA)n Simple_repeat Simple_repeat 1 39 0 717 135 0 0 chr2 146770480 146770606 -106485977 + (GGA)n Simple_repeat Simple_repeat 2 127 0 25 0 0 0 chr2 146771574 146771599 -106484984 + AT_rich Low_complexity Low_complexity 1 25 0 239 324 0 49 chr2 146773322 146773424 -106483159 + LTR16A1 LTR ERVL 243 339 -118 198 71 0 0 chr2 146774008 146774036 -106482547 + (TTG)n Simple_repeat Simple_repeat 2 29 0 186 130 239 43 chr2 146775458 146775504 -106481079 + L2 LINE L2 3214 3268 -4 239 175 0 0 chr2 146775958 146775998 -106480585 + Alu SINE Alu 2 41 -261 * 355 206 0 0 chr2 146775993 146776061 -106480522 + AluJ/FRAM SINE Alu 230 297 -5 246 345 46 0 chr2 146776627 146776714 -106479869 - L2 LINE L2 -957 2357 2267 272 372 114 40 chr2 146778651 146779003 -106477580 + L3 LINE CR1 69 446 -1131 1059 287 60 110 chr2 146779270 146780390 -106476193 + L2 LINE L2 2240 3311 -2 350 343 22 15 chr2 146781338 146781472 -106475111 - L2 LINE L2 -5 3308 3174 197 354 58 51 chr2 146781505 146781762 -106474821 + L3b LINE CR1 1146 1404 -179 278 279 163 8 chr2 146782112 146782241 -106474342 + MIR SINE MIR 6 154 -108 26 30 0 0 chr2 146782218 146782251 -106474332 + AT_rich Low_complexity Low_complexity 1 33 0 * 185 265 0 20 chr2 146782297 146782346 -106474237 + MIR3 SINE MIR 156 203 -5 485 293 140 4 chr2 146782532 146782734 -106473849 - L3 LINE CR1 -731 846 608 1975 83 0 36 chr2 146782734 146783010 -106473573 - AluY SINE Alu -2 309 44 485 293 140 4 chr2 146783010 146783036 -106473547 - L3 LINE CR1 -969 608 587 255 302 9 9 chr2 146783064 146783076 -106473507 - L1MA10 LINE L1 -12 6322 6311 1237 251 114 35 chr2 146783076 146783569 -106473014 - L1ME3 LINE L1 -14 6148 5617 2412 81 0 0 chr2 146783960 146784268 -106472315 + AluY SINE Alu 3 310 -1 759 180 0 0 chr2 146785394 146785522 -106471061 + FLAM_C SINE Alu 3 130 -13 1572 37 0 0 chr2 146786697 146786885 -106469698 + L1PA5 LINE L1 5965 6152 -2 26 30 0 0 chr2 146786885 146786918 -106469665 + AT_rich Low_complexity Low_complexity 1 33 0 226 374 41 0 chr2 146787125 146787248 -106469335 - MER5B DNA MER1_type 0 178 51 180 304 0 51 chr2 146788676 146788755 -106467828 - L2 LINE L2 -208 3064 2990 21 57 0 0 chr2 146789256 146789291 -106467292 + AT_rich Low_complexity Low_complexity 1 35 0 425 301 204 14 chr2 146789932 146790148 -106466435 + MIR SINE MIR 5 261 -1 485 341 63 47 chr2 146791087 146791468 -106465115 + L2 LINE L2 2332 2718 -596 24 53 0 0 chr2 146791659 146791697 -106464886 + AT_rich Low_complexity Low_complexity 1 38 0 2143 90 4 0 chr2 146791741 146792044 -106464539 - AluSg SINE Alu 0 304 1 2039 92 7 0 chr2 146792710 146792981 -106463602 + AluSc SINE Alu 36 308 -1 370 88 150 38 chr2 146793290 146793370 -106463213 + L1MC5 LINE L1 7807 7895 -66 213 205 0 0 chr2 146794178 146794217 -106462366 + (TG)n Simple_repeat Simple_repeat 2 40 0 1165 234 60 23 chr2 146794567 146794952 -106461631 + L1ME2 LINE L1 5658 6056 -108 356 272 12 0 chr2 146795732 146795813 -106460770 - MER81 DNA DNA -5 109 28 * 1131 264 120 31 chr2 146795811 146796227 -106460356 + LTR16B LTR ERVL 12 464 0 2737 316 56 18 chr2 146796237 146797555 -106459028 + HERV16 LTR ERVL 11 1379 -3617 3343 55 55 0 chr2 146797571 146798005 -106458578 + L1P LINE L1 4648 5105 -1041 334 304 70 29 chr2 146798037 146798208 -106458375 + HERV16 LTR ERVL 1400 1577 -3419 2300 289 24 42 chr2 146798247 146799153 -106457430 + HERV16 LTR ERVL 1665 2554 -2442 346 376 23 23 chr2 146799157 146799420 -106457163 + ERVL LTR ERVL 4793 5055 -709 744 299 166 22 chr2 146799607 146799975 -106456608 + LTR16B LTR ERVL 1 421 -43 1967 147 27 71 chr2 146800859 146800940 -106455643 - MLT1B LTR MaLR 0 390 307 5536 121 22 0 chr2 146800940 146801854 -106454729 + L1PB1 LINE L1 5219 6151 0 1967 147 27 71 chr2 146801854 146802180 -106454403 - MLT1B LTR MaLR -83 307 1 1733 156 10 17 chr2 146802670 146802971 -106453612 - L1PA15 LINE L1 -7 6158 5860 1202 156 0 0 chr2 146802972 146803158 -106453425 - L1PA15 LINE L1 -186 5979 5794 831 130 0 0 chr2 146803795 146803910 -106452673 - FLAM_C SINE Alu -14 129 15 918 269 4 52 chr2 146804574 146804842 -106451741 + MIR SINE MIR 8 262 0 2236 86 0 29 chr2 146804864 146805178 -106451405 + AluSc SINE Alu 1 305 -4 606 220 216 23 chr2 146805178 146805472 -106451111 + L1MA9 LINE L1 5934 6290 -22 809 300 118 40 chr2 146805734 146806134 -106450449 + L2 LINE L2 2882 3312 -1 271 347 57 28 chr2 146807089 146807265 -106449318 + MIR SINE MIR 1 181 -81 399 319 34 64 chr2 146808160 146808267 -106448316 + MIR3 SINE MIR 10 110 -98 789 266 126 76 chr2 146808267 146808830 -106447753 - MLT1G1 LTR MaLR 0 595 5 399 319 34 64 chr2 146808830 146808926 -106447657 + MIR3 SINE MIR 110 207 -1 2740 125 35 11 chr2 146809348 146809781 -106446802 - Tigger3b DNA MER2_type -788 443 1 336 48 0 0 chr2 146809792 146809834 -106446749 + (CA)n Simple_repeat Simple_repeat 1 42 0 2384 97 0 0 chr2 146810701 146811012 -106445571 - AluSq SINE Alu -2 311 1 21 36 0 0 chr2 146811280 146811308 -106445275 + AT_rich Low_complexity Low_complexity 1 28 0 1475 158 11 7 chr2 146811852 146812124 -106444459 - L1MC1 LINE L1 -150 6183 5911 1973 251 79 19 chr2 146812484 146813416 -106443167 + L1MB7 LINE L1 1 1068 -5791 7666 219 55 38 chr2 146813444 146816598 -106439985 + L1MB7 LINE L1 3571 6787 -208 1655 164 21 0 chr2 146816598 146816878 -106439705 + AluSx SINE Alu 1 286 -26 7666 219 55 38 chr2 146816878 146817089 -106439494 + L1MB7 LINE L1 6787 6993 -2 24 32 0 0 chr2 146817314 146817345 -106439238 + AT_rich Low_complexity Low_complexity 1 31 0 285 253 30 0 chr2 146817358 146817457 -106439126 + L1ME4a LINE L1 5986 6087 -34 26 50 0 0 chr2 146817457 146817497 -106439086 + AT_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr2 146818437 146818458 -106438125 + AT_rich Low_complexity Low_complexity 1 21 0 554 256 98 49 chr2 146819241 146819444 -106437139 - MER20 DNA MER1_type -3 216 4 1864 122 7 17 chr2 146819601 146819927 -106436656 + AluSx SINE Alu 1 323 0 1402 260 101 36 chr2 146820340 146820894 -106435689 + MLT1E LTR MaLR 1 590 -3 342 123 0 0 chr2 146820947 146821004 -106435579 + (ATG)n Simple_repeat Simple_repeat 1 57 0 209 305 25 34 chr2 146821345 146821463 -106435120 + MIR SINE MIR 136 252 -10 21 0 0 0 chr2 146822176 146822197 -106434386 + AT_rich Low_complexity Low_complexity 1 21 0 267 318 12 0 chr2 146823411 146823496 -106433087 + MIR3 SINE MIR 100 185 -23 1153 184 59 28 chr2 146823617 146823872 -106432711 - L1MC1 LINE L1 0 6333 6071 21 0 0 0 chr2 146823918 146823939 -106432644 + AT_rich Low_complexity Low_complexity 1 21 0 740 185 0 15 chr2 146823994 146824124 -106432459 - FLAM_C SINE Alu -3 130 3 975 34 0 0 chr2 146824902 146825021 -106431562 + L1PA4 LINE L1 6034 6152 -3 234 0 0 0 chr2 146825618 146825644 -106430939 + (ATG)n Simple_repeat Simple_repeat 1 26 0 397 0 38 0 chr2 146825820 146825873 -106430710 + (TA)n Simple_repeat Simple_repeat 2 56 0 500 258 23 8 chr2 146826003 146826135 -106430448 - MIR SINE MIR -127 135 2 32 43 0 0 chr2 146826306 146826352 -106430231 + AT_rich Low_complexity Low_complexity 1 46 0 779 208 22 66 chr2 146826567 146826793 -106429790 + MER20 DNA MER1_type 1 216 -3 809 271 33 75 chr2 146827124 146827486 -106429097 - L2 LINE L2 -1 3312 2966 29 0 0 0 chr2 146827655 146827684 -106428899 + AT_rich Low_complexity Low_complexity 1 29 0 689 0 0 0 chr2 146827684 146827764 -106428819 - L1PA2 LINE L1 -5 6150 6071 24 53 0 0 chr2 146828867 146828905 -106427678 + AT_rich Low_complexity Low_complexity 1 38 0 207 167 21 21 chr2 146828941 146828989 -106427594 + A-rich Low_complexity Low_complexity 4 51 0 389 294 188 19 chr2 146829556 146829716 -106426867 - MER5A DNA MER1_type -2 187 1 22 35 0 0 chr2 146830041 146830070 -106426513 + AT_rich Low_complexity Low_complexity 1 29 0 951 202 72 10 chr2 146830075 146830283 -106426300 + MIR SINE MIR 34 254 -8 21 36 0 0 chr2 146830731 146830759 -106425824 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr2 146831074 146831103 -106425480 + AT_rich Low_complexity Low_complexity 1 29 0 215 140 20 0 chr2 146832304 146832354 -106424229 + (TA)n Simple_repeat Simple_repeat 2 52 0 1891 144 11 0 chr2 146832356 146832640 -106423943 - AluSx SINE Alu -25 287 1 341 217 17 0 chr2 146832856 146832916 -106423667 + AluS SINE Alu 1 61 -242 215 140 20 0 chr2 146833243 146833293 -106423290 + (TA)n Simple_repeat Simple_repeat 2 52 0 1690 173 11 0 chr2 146833295 146833579 -106423004 - AluSx SINE Alu -25 287 1 1075 159 48 5 chr2 146833795 146834095 -106422488 + AluSx SINE Alu 1 308 0 1904 132 0 14 chr2 146834157 146834445 -106422138 + AluSx SINE Alu 5 288 -24 23 33 0 0 chr2 146834621 146834651 -106421932 + AT_rich Low_complexity Low_complexity 1 30 0 23 92 0 0 chr2 146834826 146834891 -106421692 + AT_rich Low_complexity Low_complexity 1 65 0 210 105 0 0 chr2 146836423 146836461 -106420122 + (T)n Simple_repeat Simple_repeat 1 38 0 23 33 0 0 chr2 146837242 146837272 -106419311 + AT_rich Low_complexity Low_complexity 1 30 0 210 312 101 9 chr2 146837867 146837976 -106418607 - MIR SINE MIR -62 200 82 304 291 45 22 chr2 146838680 146838903 -106417680 + HAL1 LINE L1 968 1195 -1312 3197 217 59 13 chr2 146838932 146840095 -106416488 + Charlie1 DNA MER1_type 1497 2756 -5 845 274 124 55 chr2 146840114 146840385 -106416198 + HAL1 LINE L1 1356 1607 -900 2336 90 0 0 chr2 146840385 146840685 -106415898 + AluSg SINE Alu 1 300 -10 368 99 14 0 chr2 146840685 146840756 -106415827 + (TG)n Simple_repeat Simple_repeat 2 73 0 845 274 124 55 chr2 146840756 146841009 -106415574 + HAL1 LINE L1 1606 1917 -590 262 192 14 14 chr2 146841010 146841083 -106415500 + GA-rich Low_complexity Low_complexity 4 76 0 25 0 0 0 chr2 146841239 146841264 -106415319 + AT_rich Low_complexity Low_complexity 1 25 0 453 330 31 21 chr2 146842450 146842644 -106413939 - L2 LINE L2 0 3313 3118 2012 169 13 33 chr2 146843187 146843584 -106412999 + MLT1B LTR MaLR 2 390 0 25 83 0 0 chr2 146843616 146843676 -106412907 + AT_rich Low_complexity Low_complexity 1 60 0 255 322 102 47 chr2 146843730 146843966 -106412617 - MIR SINE MIR -6 256 8 26 50 0 0 chr2 146844093 146844133 -106412450 + AT_rich Low_complexity Low_complexity 1 40 0 338 185 292 8 chr2 146844277 146844407 -106412176 + MER53 DNA DNA 18 184 -5 417 353 105 16 chr2 146844411 146844793 -106411790 + HAL1 LINE L1 37 452 -2055 810 201 11 53 chr2 146844850 146845019 -106411564 - MER5A DNA MER1_type -1 188 28 540 283 66 6 chr2 146845019 146845185 -106411398 - MER5B DNA MER1_type 0 178 3 479 294 108 64 chr2 146845206 146845347 -106411236 + HAL1 LINE L1 579 712 -1795 414 0 0 0 chr2 146845347 146845393 -106411190 + (CA)n Simple_repeat Simple_repeat 1 46 0 479 294 108 64 chr2 146845393 146845795 -106410788 + HAL1 LINE L1 712 1146 -1361 1018 286 163 22 chr2 146845855 146846433 -106410150 + HAL1 LINE L1 1246 1904 -603 183 318 201 32 chr2 146846592 146847148 -106409435 + L2 LINE L2 2197 2846 -468 203 217 22 0 chr2 146847995 146848041 -106408542 + GA-rich Low_complexity Low_complexity 2 48 0 25 51 0 0 chr2 146848063 146848102 -106408481 + AT_rich Low_complexity Low_complexity 1 39 0 1678 193 0 16 chr2 146848529 146848845 -106407738 - AluJb SINE Alu -1 311 1 275 380 23 0 chr2 146848959 146849088 -106407495 + MIR SINE MIR 15 146 -116 1621 186 74 8 chr2 146849708 146850074 -106406509 + MLT1B LTR MaLR 1 390 0 493 298 214 39 chr2 146850251 146850588 -106405995 + L2 LINE L2 2522 2798 -515 2834 6 0 0 chr2 146850588 146850899 -106405684 - AluYa5 SINE Alu 0 311 1 493 298 214 39 chr2 146850899 146851166 -106405417 + L2 LINE L2 2798 3256 -57 1465 164 3 91 chr2 146851789 146851944 -106404639 + AluJo SINE Alu 1 117 -195 2172 101 0 0 chr2 146851944 146852247 -106404336 + AluSc SINE Alu 1 303 0 1465 164 3 91 chr2 146852247 146852407 -106404176 + AluJo SINE Alu 117 290 -22 24 0 0 0 chr2 146852407 146852431 -106404152 + AT_rich Low_complexity Low_complexity 1 24 0 910 240 71 86 chr2 146852775 146853325 -106403258 + MER34 LTR ERV1 1 542 0 188 340 28 28 chr2 146853525 146853631 -106402952 + L3 LINE CR1 1071 1176 -401 414 250 99 69 chr2 146853778 146854182 -106402401 + MER34 LTR ERV1 126 541 -1 229 263 63 32 chr2 146856236 146856312 -106400271 + L3 LINE CR1 1175 1256 -321 369 0 0 0 chr2 146856312 146856353 -106400230 + (CA)n Simple_repeat Simple_repeat 2 42 0 229 263 63 32 chr2 146856353 146856371 -106400212 + L3 LINE CR1 1256 1272 -305 2308 91 3 0 chr2 146856448 146856746 -106399837 - AluSp SINE Alu -14 299 1 207 0 0 0 chr2 146857887 146857910 -106398673 + (TCTA)n Simple_repeat Simple_repeat 4 26 0 23 0 0 0 chr2 146858821 146858844 -106397739 + AT_rich Low_complexity Low_complexity 1 23 0 21 57 0 0 chr2 146858928 146858963 -106397620 + AT_rich Low_complexity Low_complexity 1 35 0 904 283 25 64 chr2 146859696 146860088 -106396495 + L2 LINE L2 2936 3312 -1 872 204 9 53 chr2 146860419 146860645 -106395938 - MER20 DNA MER1_type -3 216 1 35 41 0 0 chr2 146860859 146860908 -106395675 + AT_rich Low_complexity Low_complexity 1 49 0 490 272 21 29 chr2 146860959 146861014 -106395569 - L1MC4a LINE L1 -301 5820 5766 1396 188 116 35 chr2 146861014 146861360 -106395223 + MLT1A2 LTR MaLR 1 374 0 490 272 21 29 chr2 146861360 146861553 -106395030 - L1MC4a LINE L1 -355 5766 5632 1483 134 0 0 chr2 146861605 146861829 -106394754 + L1P LINE L1 2 225 -5921 2676 125 0 2 chr2 146861829 146862244 -106394339 + L1PA5 LINE L1 5740 6153 -1 372 289 27 34 chr2 146862371 146862520 -106394063 - L1MC/D LINE L1 -2029 5779 5632 1553 116 0 0 chr2 146862572 146862796 -106393787 + L1P LINE L1 2 225 -5921 3211 65 0 2 chr2 146862796 146863211 -106393372 + L1PA5 LINE L1 5740 6153 -1 282 336 43 21 chr2 146863215 146863355 -106393228 + MIR SINE MIR 64 206 -56 1912 267 90 7 chr2 146864958 146865561 -106391022 + MER20B DNA MER1_type 1 653 -130 1980 117 40 7 chr2 146866063 146866244 -106390339 - AluSc SINE Alu 0 309 113 225 83 0 0 chr2 146866244 146866280 -106390303 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 1980 117 40 7 chr2 146866280 146866397 -106390186 - AluSc SINE Alu -196 113 1 243 0 0 0 chr2 146867449 146867476 -106389107 + (T)n Simple_repeat Simple_repeat 1 27 0 274 316 17 0 chr2 146868583 146868700 -106387883 + (TA)n Simple_repeat Simple_repeat 2 120 0 1617 181 14 60 chr2 146868700 146869065 -106387518 + MLT1A1 LTR MaLR 5 352 -13 26 0 0 0 chr2 146869077 146869103 -106387480 + AT_rich Low_complexity Low_complexity 1 26 0 2025 111 0 37 chr2 146870149 146870446 -106386137 - AluSg SINE Alu -22 288 3 1851 115 0 0 chr2 146870646 146870920 -106385663 + AluSx SINE Alu 40 313 0 38 61 0 0 chr2 146871115 146871181 -106385402 + AT_rich Low_complexity Low_complexity 1 66 0 366 287 186 33 chr2 146871240 146871515 -106385068 + L2 LINE L2 2996 3312 -1 403 249 24 59 chr2 146872022 146872191 -106384392 + Charlie8 DNA MER1_type 46 208 -2209 584 245 49 12 chr2 146872434 146872597 -106383986 - MLT1F1 LTR MaLR -9 558 390 1084 242 55 4 chr2 146872606 146872862 -106383721 - MLT1F1 LTR MaLR -286 281 13 2032 128 3 3 chr2 146873533 146873831 -106382752 - AluSg SINE Alu -12 298 1 183 146 0 0 chr2 146873837 146873878 -106382705 + (T)n Simple_repeat Simple_repeat 1 41 0 23 0 0 0 chr2 146875579 146875602 -106380981 + AT_rich Low_complexity Low_complexity 1 23 0 1657 185 3 19 chr2 146876766 146877074 -106379509 - AluJo SINE Alu -9 303 1 212 355 64 43 chr2 146877178 146877319 -106379264 - MIR3 SINE MIR -62 146 3 930 171 6 13 chr2 146878108 146878266 -106378317 - FRAM SINE Alu -8 158 2 465 277 112 15 chr2 146878316 146878522 -106378061 + L1ME3A LINE L1 5940 6165 -5 2202 114 0 0 chr2 146878914 146879212 -106377371 - AluSc SINE Alu -11 298 1 27 0 0 0 chr2 146879303 146879330 -106377253 + AT_rich Low_complexity Low_complexity 1 27 0 26 93 0 0 chr2 146880134 146880209 -106376374 + AT_rich Low_complexity Low_complexity 1 75 0 492 288 7 20 chr2 146880678 146880824 -106375759 - MER5B DNA MER1_type -6 172 29 2170 131 0 6 chr2 146881449 146881762 -106374821 + AluSx SINE Alu 1 311 -1 193 250 0 0 chr2 146881941 146881981 -106374602 + MIR SINE MIR 219 258 -4 449 171 132 4 chr2 146882160 146882329 -106374254 + L1MC/D LINE L1 5148 5340 -813 1137 225 22 49 chr2 146882363 146882796 -106373787 + L1MC/D LINE L1 5318 5701 -541 1442 145 104 30 chr2 146882807 146883076 -106373507 - AluSx SINE Alu -23 289 1 22 35 0 0 chr2 146883706 146883735 -106372848 + AT_rich Low_complexity Low_complexity 1 29 0 1534 143 124 0 chr2 146884549 146884822 -106371761 + AluYa8 SINE Alu 1 307 -3 287 310 186 40 chr2 146885590 146885816 -106370767 + MIR SINE MIR 4 262 0 30 59 0 0 chr2 146886480 146886531 -106370052 + AT_rich Low_complexity Low_complexity 1 51 0 1921 117 0 17 chr2 146886603 146886903 -106369680 + L1PA14 LINE L1 5865 6159 -2 24 0 0 0 chr2 146886913 146886937 -106369646 + AT_rich Low_complexity Low_complexity 1 24 0 638 270 30 40 chr2 146887692 146887892 -106368691 - L2 LINE L2 -4 3309 3112 1210 208 46 49 chr2 146888645 146888972 -106367611 + MLT2C1 LTR ERVL 1 326 -71 1134 191 88 0 chr2 146889011 146889215 -106367368 + MER6 DNA MER2_type 1 222 -643 14022 221 46 15 chr2 146889222 146891112 -106365471 + L1MA4 LINE L1 15 1845 -4637 1565 32 0 5 chr2 146891112 146891124 -106365459 + AluY SINE Alu 119 130 -181 2775 16 0 0 chr2 146891124 146891435 -106365148 + AluY SINE Alu 1 311 0 1565 32 0 5 chr2 146891435 146891611 -106364972 + AluY SINE Alu 130 306 -5 14022 221 46 15 chr2 146891611 146894882 -106361701 + L1MA4 LINE L1 1845 5741 -741 1175 224 4 17 chr2 146894882 146895119 -106361464 - MER8 DNA MER2_type 0 239 6 3689 163 50 1 chr2 146895120 146895827 -106360756 + L1MA4 LINE L1 5739 6479 -3 3627 173 40 5 chr2 146895828 146895980 -106360603 + MER6 DNA MER2_type 201 346 -519 180 0 0 0 chr2 146895980 146896000 -106360583 + (TGAA)n Simple_repeat Simple_repeat 2 21 0 3627 173 40 5 chr2 146896000 146896489 -106360094 + MER6 DNA MER2_type 346 865 0 1689 217 51 57 chr2 146896675 146897028 -106359555 + MER110A LTR ERV1 1 335 -156 2152 118 0 7 chr2 146897028 146897334 -106359249 - AluSc SINE Alu -5 304 1 1689 217 51 57 chr2 146897334 146897491 -106359092 + MER110A LTR ERV1 335 491 0 1292 182 98 139 chr2 146897865 146898324 -106358259 + LTR49 LTR ERV1 1 430 -165 2268 113 0 3 chr2 146898324 146898635 -106357948 - AluSq SINE Alu -3 310 1 1292 182 98 139 chr2 146898635 146898795 -106357788 + LTR49 LTR ERV1 430 595 0 462 318 26 7 chr2 146899018 146899169 -106357414 - MIR SINE MIR -74 188 35 273 338 81 7 chr2 146899930 146900078 -106356505 - MIR SINE MIR -26 236 78 190 193 18 88 chr2 146900154 146900211 -106356372 + L2 LINE L2 3261 3313 0 22 35 0 0 chr2 146900318 146900347 -106356236 + AT_rich Low_complexity Low_complexity 1 29 0 2594 53 8 22 chr2 146900393 146900750 -106355833 + L1PA4 LINE L1 5803 6154 -1 1815 183 80 29 chr2 146902096 146902624 -106353959 + MLT2A2 LTR ERVL 1 552 -2 254 225 70 14 chr2 146904839 146904910 -106351673 - MER5A DNA MER1_type -78 111 37 337 170 185 82 chr2 146904920 146905055 -106351528 - Charlie8 DNA MER1_type -2186 231 83 217 266 194 36 chr2 146905561 146905700 -106350883 + MIR SINE MIR 41 201 -61 354 74 0 0 chr2 146905853 146905907 -106350676 + (T)n Simple_repeat Simple_repeat 1 54 0 2204 93 0 20 chr2 146906862 146907164 -106349419 - AluSp SINE Alu -17 296 1 31 58 0 0 chr2 146907348 146907400 -106349183 + AT_rich Low_complexity Low_complexity 1 52 0 207 0 0 0 chr2 146907922 146907945 -106348638 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 247 283 193 5 chr2 146908503 146908690 -106347893 + L1MEd LINE L1 984 1205 -5000 252 366 16 0 chr2 146908853 146909039 -106347544 + L1MEd LINE L1 1436 1624 -4772 1189 130 0 0 chr2 146909200 146909377 -106347206 + AluSq SINE Alu 130 306 -7 467 373 36 54 chr2 146909753 146910257 -106346326 + L2 LINE L2 2412 2906 -408 2151 124 7 0 chr2 146910283 146910590 -106345993 + AluSg SINE Alu 1 309 -1 24 0 0 0 chr2 146910863 146910887 -106345696 + AT_rich Low_complexity Low_complexity 1 24 0 185 97 32 0 chr2 146911523 146911554 -106345029 + MIR SINE MIR 217 248 -14 2055 113 0 55 chr2 146911871 146912198 -106344385 + AluSg1 SINE Alu 1 309 0 2002 126 3 19 chr2 146912326 146912636 -106343947 - AluSq SINE Alu -8 305 1 22 70 0 0 chr2 146913855 146913898 -106342685 + AT_rich Low_complexity Low_complexity 1 43 0 2044 133 0 0 chr2 146914842 146915144 -106341439 + AluY SINE Alu 1 302 -9 588 191 67 102 chr2 146915901 146916126 -106340457 + MER39 LTR ERV1 260 476 -231 491 240 123 13 chr2 146916142 146916296 -106340287 + MER34 LTR ERV1 367 537 -5 213 279 0 0 chr2 146916857 146916936 -106339647 + A-rich Low_complexity Low_complexity 1 79 0 889 250 5 11 chr2 146917405 146917593 -106338990 + MER58A DNA MER1_type 1 187 -37 633 153 0 42 chr2 146918186 146918304 -106338279 + AluJo SINE Alu 18 130 -182 841 212 12 0 chr2 146918480 146918650 -106337933 + AluJo SINE Alu 137 308 -4 937 264 23 5 chr2 146919278 146919498 -106337085 - MER58A DNA MER1_type 0 224 1 387 0 0 0 chr2 146919537 146919580 -106337003 + (CA)n Simple_repeat Simple_repeat 2 44 0 752 170 37 129 chr2 146920818 146921059 -106335524 + MER20 DNA MER1_type 1 219 0 221 83 28 0 chr2 146921195 146921231 -106335352 + (TATG)n Simple_repeat Simple_repeat 3 39 0 41 0 0 0 chr2 146921258 146921299 -106335284 + AT_rich Low_complexity Low_complexity 1 41 0 302 67 22 0 chr2 146921300 146921345 -106335238 + (GA)n Simple_repeat Simple_repeat 1 46 0 2952 83 2 0 chr2 146921380 146921779 -106334804 - L1PA10 LINE L1 -10 6158 5759 684 201 0 0 chr2 146921784 146921918 -106334665 - AluJb SINE Alu -178 134 1 330 289 102 81 chr2 146922407 146922511 -106334072 - MIR SINE MIR -13 249 149 2351 76 0 10 chr2 146922511 146922825 -106333758 + AluY SINE Alu 1 311 0 330 289 102 81 chr2 146922825 146922982 -106333601 - MIR SINE MIR -113 149 4 488 16 0 16 chr2 146923774 146923836 -106332747 + (TCTA)n Simple_repeat Simple_repeat 1 61 0 319 283 112 99 chr2 146923856 146923923 -106332660 - MIR SINE MIR -5 257 192 2092 121 0 0 chr2 146923923 146924221 -106332362 + AluSx SINE Alu 1 298 -14 319 283 112 99 chr2 146924221 146924376 -106332207 - MIR SINE MIR -70 192 32 339 317 121 55 chr2 146924537 146924935 -106331648 + L2 LINE L2 1870 2293 -1021 1172 180 33 29 chr2 146925057 146925301 -106331282 + MER58B DNA MER1_type 94 338 -3 1885 236 45 34 chr2 146925476 146925947 -106330636 + MLT2B2 LTR ERVL 1 476 -39 191 184 0 20 chr2 146925974 146926023 -106330560 + (CATA)n Simple_repeat Simple_repeat 3 50 0 757 227 45 6 chr2 146926124 146926300 -106330283 + MER5A DNA MER1_type 7 189 0 242 289 62 62 chr2 146926452 146926549 -106330034 - MIR SINE MIR -152 110 14 219 219 10 94 chr2 146926596 146926692 -106329891 + L2 LINE L2 3139 3226 -87 355 309 36 22 chr2 146926799 146926938 -106329645 + MIR SINE MIR 13 153 -109 282 277 134 17 chr2 146927585 146927704 -106328879 - MIR SINE MIR -65 197 65 181 349 0 0 chr2 146927748 146927791 -106328792 - MIR SINE MIR -174 88 46 21 36 0 0 chr2 146927827 146927855 -106328728 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 146928158 146928179 -106328404 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 146930180 146930209 -106326374 + AT_rich Low_complexity Low_complexity 1 29 0 186 43 0 0 chr2 146931064 146931087 -106325496 + (A)n Simple_repeat Simple_repeat 1 23 0 919 304 95 22 chr2 146931104 146931637 -106324946 - L2 LINE L2 -2 3311 2725 801 220 108 125 chr2 146931678 146932189 -106324394 + LTR28 LTR ERV1 1 1305 -450 701 277 61 67 chr2 146932304 146932632 -106323951 - L2 LINE L2 -619 2695 2370 2975 168 101 26 chr2 146932663 146933395 -106323188 + LTR48 LTR ERV1 1 787 0 23 78 0 0 chr2 146933486 146933537 -106323046 + AT_rich Low_complexity Low_complexity 1 51 0 259 270 111 32 chr2 146933984 146934110 -106322473 + MIR SINE MIR 101 236 -26 237 156 0 44 chr2 146934482 146934527 -106322056 + LTR49 LTR ERV1 271 313 -282 8571 115 44 36 chr2 146934527 146936145 -106320438 + MER4A-int LTR ERV1 865 2495 -4103 1234 139 66 70 chr2 146936145 146936403 -106320180 - LTR8 LTR ERV1 -434 257 1 4049 137 79 18 chr2 146936403 146937294 -106319289 + MER4A-int LTR ERV1 2737 3681 -2917 * 5899 108 61 36 chr2 146937293 146937535 -106319048 + MER4A-int LTR ERV1 3837 4071 -2527 2138 120 3 0 chr2 146937535 146937834 -106318749 + AluSq SINE Alu 1 300 -13 5899 108 61 36 chr2 146937834 146938659 -106317924 + MER4A-int LTR ERV1 4071 4931 -1667 4287 134 42 26 chr2 146938759 146939522 -106317061 + MER4A-int LTR ERV1 5822 6596 -2 539 141 0 11 chr2 146939529 146939621 -106316962 + MER4A LTR ERV1 1 91 -573 1564 160 3 49 chr2 146939674 146939980 -106316603 + MER4A LTR ERV1 373 664 0 310 232 32 32 chr2 146940150 146940245 -106316338 + L1MC5 LINE L1 7823 7917 -44 1936 130 62 7 chr2 146940756 146941048 -106315535 + AluSg SINE Alu 1 308 -2 267 31 0 0 chr2 146943285 146943317 -106313266 + (TG)n Simple_repeat Simple_repeat 2 33 0 21 89 0 0 chr2 146943412 146943468 -106313115 + AT_rich Low_complexity Low_complexity 1 56 0 22 35 0 0 chr2 146943670 146943699 -106312884 + AT_rich Low_complexity Low_complexity 1 29 0 590 271 178 12 chr2 146944409 146944653 -106311930 - Charlie8 DNA MER1_type -2134 283 1 231 311 100 34 chr2 146945055 146945241 -106311342 - MIR SINE MIR -60 202 9 1797 170 3 10 chr2 146946742 146947036 -106309547 - AluJb SINE Alu -14 298 7 2010 133 10 0 chr2 146947386 146947680 -106308903 - AluSx SINE Alu -15 297 1 22 0 0 0 chr2 146947823 146947845 -106308738 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 146948368 146948389 -106308194 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr2 146948432 146948463 -106308120 + AT_rich Low_complexity Low_complexity 1 31 0 486 254 14 14 chr2 146949359 146949501 -106307082 - L1M4 LINE L1 -1122 5024 4883 333 180 0 0 chr2 146949511 146949572 -106307011 + L1MB7 LINE L1 4961 5021 -1125 2239 188 100 2 chr2 146949574 146950085 -106306498 + L1MB7 LINE L1 5624 6184 0 514 277 108 65 chr2 146950328 146950714 -106305869 + L1M4 LINE L1 3047 3455 -2691 2214 105 10 0 chr2 146950714 146951010 -106305573 + AluSx SINE Alu 4 302 -10 514 277 108 65 chr2 146951010 146951056 -106305527 + L1M4 LINE L1 3455 3498 -2648 343 273 73 0 chr2 146951118 146951228 -106305355 + MER5C DNA MER1_type 2 119 -205 651 221 19 72 chr2 146951296 146951333 -106305250 - MIR SINE MIR -17 245 208 1904 160 0 3 chr2 146951333 146951626 -106304957 - AluSx SINE Alu -20 292 1 651 221 19 72 chr2 146951626 146951796 -106304787 - MIR SINE MIR -54 208 49 365 313 79 28 chr2 146951797 146952108 -106304475 + L1MC/D LINE L1 5482 5815 -536 212 175 0 0 chr2 146954145 146954185 -106302398 + (TAAA)n Simple_repeat Simple_repeat 4 43 0 229 349 73 5 chr2 146954449 146954641 -106301942 + L1ME LINE L1 5370 5574 -588 255 343 29 43 chr2 146955511 146955651 -106300932 + MIR SINE MIR 52 189 -73 2030 116 20 0 chr2 146956696 146956988 -106299595 + AluSx SINE Alu 1 298 -14 21 0 0 0 chr2 146957191 146957212 -106299371 + AT_rich Low_complexity Low_complexity 1 21 0 1627 231 150 43 chr2 146957389 146958135 -106298448 - LTR1B LTR ERV1 0 826 1 30 59 0 0 chr2 146958191 146958242 -106298341 + AT_rich Low_complexity Low_complexity 1 51 0 24 32 0 0 chr2 146958291 146958322 -106298261 + AT_rich Low_complexity Low_complexity 1 31 0 1460 196 4 0 chr2 146958549 146958809 -106297774 - AluJo SINE Alu -51 261 1 1203 181 4 4 chr2 146959255 146959481 -106297102 + MER39B LTR ERV1 1 226 -427 2078 187 34 28 chr2 146959485 146960034 -106296549 + MLT2A2 LTR ERVL 1 554 0 1472 147 120 17 chr2 146960034 146960326 -106296257 + MER39 LTR ERV1 272 593 -114 670 142 8 8 chr2 146962020 146962140 -106294443 + MER39 LTR ERV1 588 707 0 21 0 0 0 chr2 146963051 146963072 -106293511 + AT_rich Low_complexity Low_complexity 1 21 0 1300 73 30 73 chr2 146963072 146963128 -106293455 - L1MA3 LINE L1 -1 6304 6247 2121 125 41 16 chr2 146963128 146963497 -106293086 + MER83B LTR ERV1 1 378 0 1300 73 30 73 chr2 146963497 146963672 -106292911 - L1MA3 LINE L1 -58 6247 6083 26 74 0 0 chr2 146963762 146963816 -106292767 + AT_rich Low_complexity Low_complexity 1 54 0 1145 192 36 49 chr2 146963920 146964228 -106292355 - Charlie4a DNA MER1_type -193 315 12 241 343 30 45 chr2 146964375 146964509 -106292074 - MIR SINE MIR -121 141 10 301 258 0 45 chr2 146966051 146966140 -106290443 + L2 LINE L2 3169 3253 -60 501 172 11 0 chr2 146967115 146967202 -106289381 + MER67A LTR ERV1 1 88 -455 875 238 92 22 chr2 146967250 146967576 -106289007 + MER67B LTR ERV1 47 383 -278 322 260 81 20 chr2 146967659 146967869 -106288714 + MER67A LTR ERV1 272 530 -13 298 83 17 17 chr2 146970362 146970422 -106286161 + (TA)n Simple_repeat Simple_repeat 1 60 0 189 0 0 0 chr2 146970827 146970848 -106285735 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 2018 126 7 0 chr2 146970848 146971126 -106285457 - AluSq SINE Alu -32 281 2 25 0 0 0 chr2 146971398 146971423 -106285160 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr2 146971435 146971463 -106285120 + AT_rich Low_complexity Low_complexity 1 28 0 333 279 135 47 chr2 146971637 146971977 -106284606 + L1MC4a LINE L1 4114 4483 -1663 24 67 0 0 chr2 146972211 146972256 -106284327 + AT_rich Low_complexity Low_complexity 1 45 0 317 353 64 14 chr2 146972860 146973206 -106283377 + L1MC4a LINE L1 5545 5907 -1901 195 338 45 38 chr2 146973547 146973680 -106282903 - L2 LINE L2 -12 3301 3168 260 323 38 0 chr2 146973829 146973962 -106282621 - MER117 DNA MER1_type -59 138 1 21 36 0 0 chr2 146975042 146975070 -106281513 + AT_rich Low_complexity Low_complexity 1 28 0 181 269 139 28 chr2 146975225 146975333 -106281250 - L2 LINE L2 -4 3309 3190 23 0 0 0 chr2 146976700 146976723 -106279860 + AT_rich Low_complexity Low_complexity 1 23 0 373 346 9 0 chr2 146976957 146977064 -106279519 - MIR SINE MIR -102 160 53 1779 144 7 27 chr2 146977401 146977733 -106278850 + AluSx SINE Alu 5 312 0 1808 94 0 0 chr2 146977837 146978081 -106278502 + AluY SINE Alu 61 304 -7 318 273 95 35 chr2 146978865 146979096 -106277487 - L1MC4a LINE L1 -1857 5951 5707 5064 192 11 9 chr2 146979099 146980058 -106276525 + L1MC1 LINE L1 5368 6328 -5 254 266 154 9 chr2 146980076 146980217 -106276366 - L1M4 LINE L1 -3180 2966 2847 297 0 0 0 chr2 146980217 146980250 -106276333 + (TG)n Simple_repeat Simple_repeat 2 34 0 254 266 154 9 chr2 146980250 146980322 -106276261 - L1M4 LINE L1 -3299 2847 2722 374 267 135 26 chr2 146980415 146980681 -106275902 - L1MC4a LINE L1 -420 5701 5407 765 178 64 15 chr2 146980684 146980966 -106275617 + MLT1A2 LTR MaLR 1 374 0 283 271 41 16 chr2 146981905 146982027 -106274556 - L1MC/D LINE L1 -2016 5792 5668 333 68 0 0 chr2 146984312 146984356 -106272227 + (CA)n Simple_repeat Simple_repeat 2 45 0 29 28 0 0 chr2 146984688 146984724 -106271859 + AT_rich Low_complexity Low_complexity 1 36 0 210 303 45 0 chr2 146984724 146984790 -106271793 + MIR SINE MIR 54 122 -140 1104 172 44 15 chr2 146987054 146987257 -106269326 - MER2 DNA MER2_type -136 209 1 189 107 0 0 chr2 146988082 146988110 -106268473 + (T)n Simple_repeat Simple_repeat 1 28 0 1519 181 31 35 chr2 146988385 146988673 -106267910 - AluJo SINE Alu -25 287 1 2013 124 3 0 chr2 146989054 146989336 -106267247 + AluSx SINE Alu 1 283 -29 285 344 56 0 chr2 146989377 146989467 -106267116 - MIR SINE MIR -146 116 22 1734 110 6 119 chr2 146989739 146990076 -106266507 - AluSx SINE Alu -3 299 1 287 81 0 0 chr2 146990131 146990168 -106266415 - tRNA-Gln-CAG tRNA tRNA -38 37 1 684 288 50 72 chr2 146990336 146990739 -106265844 - MLT1I LTR MaLR -13 396 3 338 338 109 26 chr2 146990773 146991199 -106265384 - L2 LINE L2 -225 3047 2589 360 0 0 0 chr2 146991787 146991827 -106264756 + (CA)n Simple_repeat Simple_repeat 1 40 0 35 0 0 0 chr2 146994177 146994212 -106262371 + AT_rich Low_complexity Low_complexity 1 35 0 1102 201 67 0 chr2 146994339 146994548 -106262035 + MER58A DNA MER1_type 2 224 0 1277 194 46 57 chr2 146994623 146994906 -106261677 + AluJb SINE Alu 3 282 -30 279 0 0 0 chr2 146994917 146994948 -106261635 + (CA)n Simple_repeat Simple_repeat 2 32 0 263 115 0 66 chr2 146994951 146995012 -106261571 - L1MC4 LINE L1 -1339 6703 6647 22 0 0 0 chr2 146995809 146995831 -106260752 + AT_rich Low_complexity Low_complexity 1 22 0 10163 153 47 96 chr2 146996398 146998026 -106258557 + L1M4c LINE L1 20 1725 -4659 219 69 0 0 chr2 146998026 146998055 -106258528 + (TG)n Simple_repeat Simple_repeat 2 30 0 10163 153 47 96 chr2 146998055 146998090 -106258493 + L1M4c LINE L1 1725 1760 -4624 2097 153 0 0 chr2 146998090 146998397 -106258186 + AluSx SINE Alu 3 309 -3 10163 153 47 96 chr2 146998397 146998874 -106257709 + L1M4c LINE L1 1760 2029 -4355 549 86 0 12 chr2 146998874 146998955 -106257628 - MADE1 DNA Mariner 0 80 1 10163 153 47 96 chr2 146998955 146999279 -106257304 + L1M4c LINE L1 2029 2367 -4017 1700 188 8 16 chr2 146999280 146999663 -106256920 + L1MB3 LINE L1 5801 6180 -3 262 298 83 12 chr2 147000148 147000232 -106256351 + MIR3 SINE MIR 94 183 -25 195 100 0 0 chr2 147001326 147001356 -106255227 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 76 12 0 0 chr2 147001492 147001575 -106255008 + AT_rich Low_complexity Low_complexity 1 83 0 1995 141 7 3 chr2 147001916 147002215 -106254368 - AluSx SINE Alu -12 300 1 2750 80 11 3 chr2 147002692 147003069 -106253514 - L1P4 LINE L1 -404 5764 5385 403 312 16 18 chr2 147003293 147003490 -106253093 + L1PA16 LINE L1 12 247 -6591 13938 223 30 14 chr2 147003620 147008351 -106248232 + L1PA16 LINE L1 1404 6325 -543 1917 146 0 4 chr2 147008351 147008672 -106247911 + AluSx SINE Alu 4 323 0 13938 223 30 14 chr2 147008672 147009224 -106247359 + L1PA16 LINE L1 6325 6867 -1 2493 65 3 0 chr2 147011690 147011999 -106244584 + AluY SINE Alu 2 311 0 1654 176 0 27 chr2 147012526 147012822 -106243761 - AluSx SINE Alu -24 288 1 226 233 0 0 chr2 147014529 147014589 -106241994 + A-rich Low_complexity Low_complexity 1 60 0 1975 113 3 7 chr2 147015114 147015419 -106241164 - AluSc SINE Alu 0 304 1 274 303 97 35 chr2 147015791 147015936 -106240647 - MIR3 SINE MIR -53 155 2 221 297 134 79 chr2 147018173 147018375 -106238208 - MIR SINE MIR -48 214 2 297 292 46 31 chr2 147018785 147018915 -106237668 + MIR SINE MIR 20 151 -111 180 111 0 0 chr2 147019000 147019027 -106237556 + (TGAA)n Simple_repeat Simple_repeat 2 28 0 217 347 153 0 chr2 147019030 147019102 -106237481 - L2 LINE L2 -51 3221 3139 980 273 114 81 chr2 147019570 147020714 -106235869 + L1MEd LINE L1 59 1240 -4879 223 323 99 74 chr2 147020945 147021391 -106235192 - L2 LINE L2 -1240 2074 1618 21 36 0 0 chr2 147021656 147021684 -106234899 + AT_rich Low_complexity Low_complexity 1 28 0 233 277 85 11 chr2 147023061 147023155 -106233428 - MIR SINE MIR -37 225 125 240 302 36 7 chr2 147023336 147023475 -106233108 + L1MEd LINE L1 2662 2804 -3325 245 210 65 57 chr2 147023848 147023972 -106232611 + HAL1 LINE L1 2270 2394 -113 22 0 0 0 chr2 147025218 147025240 -106231343 + AT_rich Low_complexity Low_complexity 1 22 0 208 286 0 0 chr2 147025442 147025491 -106231092 + (TA)n Simple_repeat Simple_repeat 2 50 0 1808 156 0 21 chr2 147025705 147025881 -106230702 + AluSx SINE Alu 1 170 -142 7437 68 21 6 chr2 147025881 147026873 -106229710 - LTR13 LTR ERVK 0 1007 1 1808 156 0 21 chr2 147026873 147026984 -106229599 + AluSx SINE Alu 170 282 -30 288 206 123 14 chr2 147027088 147027161 -106229422 - MER5B DNA MER1_type -17 161 81 299 204 57 34 chr2 147027195 147027283 -106229300 + MLT1C LTR MaLR 6 95 -295 32830 57 10 2 chr2 147027592 147032624 -106223959 - L1PA5 LINE L1 -6 6148 1081 700 129 0 0 chr2 147032602 147032703 -106223880 - L1PA5 LINE L1 -6044 102 2 * 1630 178 6 16 chr2 147032759 147033074 -106223509 - AluJb SINE Alu 0 312 1 1092 223 92 52 chr2 147033157 147033525 -106223058 + MLT1C LTR MaLR 82 464 -3 2178 77 21 11 chr2 147033586 147033873 -106222710 + AluY SINE Alu 1 290 -21 364 259 0 89 chr2 147033873 147034008 -106222575 + MER5A DNA MER1_type 38 160 -29 187 340 10 30 chr2 147034801 147034901 -106221682 + L3 LINE CR1 202 299 -1278 333 167 29 29 chr2 147034974 147035112 -106221471 + (TA)n Simple_repeat Simple_repeat 2 139 0 954 357 80 56 chr2 147035193 147035770 -106220813 + L3 LINE CR1 505 1120 -457 679 188 12 18 chr2 147035770 147035940 -106220643 - L1MB2 LINE L1 -3 6168 6000 954 357 80 56 chr2 147035940 147036409 -106220174 + L3 LINE CR1 1120 1576 -1 203 271 0 0 chr2 147036629 147036677 -106219906 + GA-rich Low_complexity Low_complexity 3 50 0 180 152 0 0 chr2 147037279 147037312 -106219271 + A-rich Low_complexity Low_complexity 4 36 0 1601 160 32 14 chr2 147037966 147038247 -106218336 - AluJb SINE Alu -23 289 4 376 152 0 22 chr2 147038251 147038343 -106218240 + CT-rich Low_complexity Low_complexity 2 91 0 2260 114 0 9 chr2 147038525 147038841 -106217742 - AluSq SINE Alu 0 313 1 1697 153 105 15 chr2 147039129 147039463 -106217120 + THE1B LTR MaLR 1 364 0 696 230 7 27 chr2 147039576 147039604 -106216979 + MER5A DNA MER1_type 34 61 -128 346 174 0 70 chr2 147039604 147039690 -106216893 + MADE1 DNA Mariner 1 80 0 696 230 7 27 chr2 147039690 147039809 -106216774 + MER5A DNA MER1_type 61 178 -11 666 217 48 24 chr2 147039805 147039971 -106216612 - MER5B DNA MER1_type -5 173 4 * 22 0 0 0 chr2 147040376 147040398 -106216185 + AT_rich Low_complexity Low_complexity 1 22 0 1358 209 68 52 chr2 147040965 147041009 -106215574 - MER63B DNA MER1_type -626 436 394 1890 168 3 3 chr2 147041009 147041307 -106215276 - AluSx SINE Alu -12 300 3 1358 209 68 52 chr2 147041307 147041688 -106214895 - MER63B DNA MER1_type -668 394 4 319 335 110 7 chr2 147041803 147041958 -106214625 + MIR SINE MIR 28 198 -64 4009 97 2 13 chr2 147042691 147043287 -106213296 + L1PB2 LINE L1 5562 6150 -1 26 64 0 0 chr2 147043351 147043398 -106213185 + AT_rich Low_complexity Low_complexity 1 47 0 23 0 0 0 chr2 147044415 147044438 -106212145 + AT_rich Low_complexity Low_complexity 1 23 0 261 313 20 13 chr2 147046275 147046425 -106210158 + CT-rich Low_complexity Low_complexity 2 152 0 21 36 0 0 chr2 147048003 147048031 -106208552 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr2 147048076 147048102 -106208481 + AT_rich Low_complexity Low_complexity 1 26 0 583 304 72 21 chr2 147048178 147048588 -106207995 - L1ME3A LINE L1 -295 5875 5443 296 385 19 47 chr2 147048618 147048831 -106207752 + L2 LINE L2 3010 3216 -56 511 93 13 0 chr2 147049393 147049468 -106207115 - MADE1 DNA Mariner 0 80 5 1676 180 14 3 chr2 147049733 147050028 -106206555 + AluSx SINE Alu 1 298 -14 190 247 117 123 chr2 147050151 147050313 -106206270 + MIR3 SINE MIR 19 179 -29 24 0 0 0 chr2 147051173 147051197 -106205386 + AT_rich Low_complexity Low_complexity 1 24 0 2084 105 37 3 chr2 147051954 147052248 -106204335 + AluSq SINE Alu 1 304 -9 25 0 0 0 chr2 147052389 147052414 -106204169 + AT_rich Low_complexity Low_complexity 1 25 0 238 265 83 61 chr2 147053548 147053680 -106202903 - L2 LINE L2 -19 3294 3160 619 165 0 35 chr2 147054573 147054688 -106201895 + HY1 scRNA scRNA 1 111 -1 21 89 0 0 chr2 147054978 147055034 -106201549 + AT_rich Low_complexity Low_complexity 1 56 0 816 171 26 0 chr2 147056252 147056404 -106200179 - L1MA7 LINE L1 -352 5939 5784 279 0 0 0 chr2 147056420 147056451 -106200132 + (TG)n Simple_repeat Simple_repeat 2 32 0 1102 208 62 21 chr2 147056463 147056766 -106199817 + L1MA9 LINE L1 5940 6274 -25 2438 181 11 2 chr2 147056979 147057416 -106199167 + MER65C LTR ERV1 2 442 -19 190 296 19 83 chr2 147057549 147057657 -106198926 - MIR SINE MIR -43 219 119 907 182 28 22 chr2 147058006 147058187 -106198396 + LTR40a LTR ERVL 338 519 0 24 32 0 0 chr2 147058939 147058970 -106197613 + AT_rich Low_complexity Low_complexity 1 31 0 1500 189 7 30 chr2 147061489 147061791 -106194792 - AluJo SINE Alu -17 295 1 2029 73 4 0 chr2 147063033 147063308 -106193275 - L1PA5 LINE L1 0 6154 5879 1573 170 8 0 chr2 147064127 147064380 -106192203 + MER2 DNA MER2_type 1 255 -90 27 0 0 0 chr2 147064719 147064746 -106191837 + AT_rich Low_complexity Low_complexity 1 27 0 309 241 36 0 chr2 147064933 147065016 -106191567 + L1ME4a LINE L1 5806 5891 -230 346 284 70 60 chr2 147065019 147065112 -106191471 + MIR SINE MIR 50 141 -121 2037 151 45 25 chr2 147065112 147065469 -106191114 + THE1B LTR MaLR 1 364 0 346 284 70 60 chr2 147065469 147065576 -106191007 + MIR SINE MIR 141 252 -10 1207 353 11 96 chr2 147065885 147066446 -106190137 + MLT2B1 LTR ERVL 1 513 -7 1529 122 55 0 chr2 147067936 147068191 -106188392 - L1MA5A LINE L1 -4 6293 6025 592 229 66 0 chr2 147068283 147068405 -106188178 - MER7A DNA MER2_type -7 329 200 1035 171 62 19 chr2 147068506 147068716 -106187867 - MER7A DNA MER2_type -128 218 2 28 29 0 0 chr2 147070038 147070073 -106186510 + AT_rich Low_complexity Low_complexity 1 35 0 32 67 0 0 chr2 147070155 147070215 -106186368 + AT_rich Low_complexity Low_complexity 1 60 0 24 0 0 0 chr2 147070260 147070284 -106186299 + AT_rich Low_complexity Low_complexity 1 24 0 198 227 55 180 chr2 147070423 147070551 -106186032 + L2 LINE L2 3202 3313 0 22 0 0 0 chr2 147071511 147071533 -106185050 + AT_rich Low_complexity Low_complexity 1 22 0 380 342 32 19 chr2 147071670 147071828 -106184755 + MIR SINE MIR 32 191 -71 1980 127 3 3 chr2 147072299 147072591 -106183992 - AluSq SINE Alu -21 292 1 270 0 0 0 chr2 147072727 147072757 -106183826 + (TG)n Simple_repeat Simple_repeat 2 31 0 38 22 0 0 chr2 147072779 147072824 -106183759 + AT_rich Low_complexity Low_complexity 1 45 0 243 0 0 0 chr2 147072847 147072874 -106183709 + (GA)n Simple_repeat Simple_repeat 2 28 0 23 33 0 0 chr2 147078478 147078508 -106178075 + AT_rich Low_complexity Low_complexity 1 30 0 285 209 0 0 chr2 147078547 147078614 -106177969 + (TA)n Simple_repeat Simple_repeat 2 68 0 1769 168 0 20 chr2 147078618 147078922 -106177661 + AluJo SINE Alu 1 298 -14 344 265 161 52 chr2 147079257 147079487 -106177096 + L3 LINE CR1 1322 1576 -1 334 362 86 16 chr2 147080225 147080468 -106176115 + MIR SINE MIR 3 262 0 388 268 22 58 chr2 147082683 147082821 -106173762 + MIR SINE MIR 130 262 0 21 36 0 0 chr2 147083022 147083050 -106173533 + AT_rich Low_complexity Low_complexity 1 28 0 24 53 0 0 chr2 147084276 147084314 -106172269 + AT_rich Low_complexity Low_complexity 1 38 0 1870 249 13 9 chr2 147085503 147085961 -106170622 - LTR40b LTR ERVL -2 460 1 2110 159 39 39 chr2 147086265 147086679 -106169904 + MLT2D LTR ERVL 1 414 0 237 375 29 0 chr2 147087732 147087836 -106168747 - MIR3 SINE MIR -31 177 71 313 203 123 110 chr2 147088133 147088296 -106168287 + MIR SINE MIR 86 250 -12 626 200 95 42 chr2 147088452 147088579 -106168004 + L1MD3 LINE L1 7778 7920 -75 1428 198 63 20 chr2 147088579 147088928 -106167655 + MLT1A1 LTR MaLR 2 365 0 626 200 95 42 chr2 147088928 147088990 -106167593 + L1MD3 LINE L1 7920 7977 -18 24 0 0 0 chr2 147088990 147089014 -106167569 + AT_rich Low_complexity Low_complexity 1 24 0 26 50 0 0 chr2 147089076 147089116 -106167467 + AT_rich Low_complexity Low_complexity 1 40 0 853 312 94 12 chr2 147089638 147090052 -106166531 - L2 LINE L2 0 3313 2866 364 280 68 6 chr2 147090446 147090673 -106165910 + LTR40c LTR ERVL 173 408 -54 855 244 42 0 chr2 147090696 147090889 -106165694 - MER20 DNA MER1_type -1 218 18 300 53 0 0 chr2 147092136 147092174 -106164409 + (CA)n Simple_repeat Simple_repeat 1 38 0 357 324 156 9 chr2 147093088 147093536 -106163047 - L1ME3A LINE L1 -329 5841 5328 240 163 0 0 chr2 147093683 147093726 -106162857 + (TA)n Simple_repeat Simple_repeat 1 43 0 500 253 76 83 chr2 147093903 147094330 -106162253 - L2 LINE L2 -211 3061 2656 295 176 27 40 chr2 147094330 147094398 -106162185 - MLT1F LTR MaLR 0 542 476 1395 177 46 58 chr2 147094398 147094726 -106161857 + MLT1A2 LTR MaLR 1 324 -50 7356 32 6 0 chr2 147095191 147096261 -106160322 + L1PA3 LINE L1 5088 6162 0 993 242 65 7 chr2 147096907 147097213 -106159370 + L1MCc LINE L1 36 359 -6064 1219 303 99 35 chr2 147097659 147098253 -106158330 + L1MCc LINE L1 655 1286 -5137 288 200 0 0 chr2 147098736 147098806 -106157777 + (CA)n Simple_repeat Simple_repeat 1 70 0 22 0 0 0 chr2 147099014 147099036 -106157547 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr2 147099809 147099846 -106156737 + AT_rich Low_complexity Low_complexity 1 37 0 2179 240 22 15 chr2 147099853 147100387 -106156196 + MER44D DNA MER2_type 13 605 0 228 163 0 0 chr2 147101499 147101542 -106155041 + (TG)n Simple_repeat Simple_repeat 2 44 0 1481 199 69 113 chr2 147102136 147102504 -106154079 - MLT1D LTR MaLR -6 499 159 1269 153 8 30 chr2 147102504 147102766 -106153817 + L1MA5 LINE L1 6033 6288 -12 1481 199 69 113 chr2 147102766 147102919 -106153664 - MLT1D LTR MaLR -346 159 1 1583 273 55 18 chr2 147102962 147103457 -106153126 + LTR40a LTR ERVL 7 519 0 695 273 43 0 chr2 147103462 147103649 -106152934 + MIR SINE MIR 68 262 0 1585 164 0 52 chr2 147103818 147104163 -106152420 + AluJb SINE Alu 23 312 0 7474 23 6 1 chr2 147104744 147106316 -106150267 + L1PA2 LINE L1 4579 6154 -1 3263 29 0 0 chr2 147106506 147106892 -106149691 + L1PA2 LINE L1 5758 6143 -12 32 0 0 0 chr2 147106896 147106928 -106149655 + AT_rich Low_complexity Low_complexity 1 32 0 339 259 134 73 chr2 147106998 147107245 -106149338 + L2 LINE L2 3047 3308 -5 1786 133 0 0 chr2 147108269 147108518 -106148065 + AluSx SINE Alu 1 249 -63 297 0 0 0 chr2 147108524 147108557 -106148026 + (TAA)n Simple_repeat Simple_repeat 1 33 0 35 63 0 0 chr2 147111639 147111702 -106144881 + AT_rich Low_complexity Low_complexity 1 63 0 1853 77 7 25 chr2 147111800 147112074 -106144509 - L1PA8 LINE L1 -6 6166 5898 4557 89 14 0 chr2 147112077 147113004 -106143579 + L1PA8 LINE L1 4965 5900 -272 24 32 0 0 chr2 147113004 147113035 -106143548 + AT_rich Low_complexity Low_complexity 1 31 0 298 222 37 0 chr2 147113269 147113350 -106143233 - L1ME3A LINE L1 -300 5870 5787 23 33 0 0 chr2 147113702 147113732 -106142851 + AT_rich Low_complexity Low_complexity 1 30 0 408 317 0 0 chr2 147113859 147114004 -106142579 - L1ME4a LINE L1 -266 5855 5711 1325 189 0 0 chr2 147114171 147114404 -106142179 - AluJb SINE Alu -76 236 4 309 183 0 0 chr2 147115257 147115317 -106141266 + (TATG)n Simple_repeat Simple_repeat 4 63 0 24 0 0 0 chr2 147115963 147115987 -106140596 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr2 147117217 147117239 -106139344 + AT_rich Low_complexity Low_complexity 1 22 0 315 0 0 0 chr2 147117272 147117307 -106139276 + (TG)n Simple_repeat Simple_repeat 2 36 0 2736 294 151 19 chr2 147117689 147118922 -106137661 + L2 LINE L2 1540 3022 -291 2155 123 54 14 chr2 147118922 147119272 -106137311 + THE1B LTR MaLR 1 364 0 2736 294 151 19 chr2 147119272 147119609 -106136974 + L2 LINE L2 3022 3313 0 212 233 0 0 chr2 147125084 147125127 -106131456 + CT-rich Low_complexity Low_complexity 2 44 0 1329 242 86 49 chr2 147126562 147127111 -106129472 - L1MC4 LINE L1 -15 8027 7459 2810 172 16 71 chr2 147129644 147130290 -106126293 - LTR9 LTR ERV1 0 612 3 3350 28 0 0 chr2 147131269 147131662 -106124921 - L1PA3 LINE L1 0 6155 5763 15140 28 2 0 chr2 147131662 147133486 -106123097 + L1P LINE L1 2830 4656 -1490 246 332 62 60 chr2 147133681 147134130 -106122453 + L2 LINE L2 517 966 -2348 1275 352 98 25 chr2 147134130 147135824 -106120759 + L2 LINE L2 1292 3073 -199 189 326 105 12 chr2 147135932 147136018 -106120565 + L2 LINE L2 3193 3286 -27 264 77 0 0 chr2 147136019 147136058 -106120525 + (TC)n Simple_repeat Simple_repeat 2 40 0 210 123 53 0 chr2 147136057 147136114 -106120469 + (TA)n Simple_repeat Simple_repeat 1 60 0 * 250 255 0 0 chr2 147137901 147137952 -106118631 - MER5A DNA MER1_type -1 188 138 569 309 11 6 chr2 147137965 147138146 -106118437 + L1MC/D LINE L1 5555 5736 -2072 2028 112 0 11 chr2 147138432 147138752 -106117831 + AluSg SINE Alu 1 295 -15 1327 216 60 50 chr2 147138948 147139328 -106117255 + MLT2C1 LTR ERVL 14 397 0 318 321 0 12 chr2 147140407 147140491 -106116092 - MIR SINE MIR -86 122 40 321 23 23 0 chr2 147141270 147141314 -106115269 - MADE1 DNA Mariner 0 80 36 299 292 21 21 chr2 147142043 147142139 -106114444 - L2 LINE L2 0 3272 3177 1066 230 49 0 chr2 147142194 147142420 -106114163 + Tigger7 DNA MER2_type 1 237 -2250 309 238 0 16 chr2 147142412 147142475 -106114108 - AluJ SINE Alu -115 187 126 * 648 228 0 0 chr2 147142476 147142599 -106113984 - AluJ SINE Alu -178 124 2 426 274 0 0 chr2 147142600 147142695 -106113888 - MER46A DNA MER2_type -141 95 1 432 221 0 12 chr2 147142696 147142782 -106113801 + Tigger7 DNA MER2_type 2402 2486 -1 734 269 45 57 chr2 147144936 147144982 -106111601 + MIR SINE MIR 2 47 -215 2560 141 19 30 chr2 147144982 147145415 -106111168 + MSTC LTR MaLR 1 428 0 734 269 45 57 chr2 147145415 147145632 -106110951 + MIR SINE MIR 47 262 0 2596 33 0 0 chr2 147146117 147146417 -106110166 - AluY SINE Alu -11 300 1 1495 284 93 31 chr2 147146637 147146765 -106109818 - L1MC4 LINE L1 -107 7935 7816 1942 168 12 52 chr2 147146765 147147169 -106109414 + MLT1B LTR MaLR 3 390 0 1495 284 93 31 chr2 147147169 147147960 -106108623 - L1MC4 LINE L1 -226 7816 6959 369 0 0 0 chr2 147148087 147148128 -106108455 + (TG)n Simple_repeat Simple_repeat 2 42 0 365 335 92 19 chr2 147148972 147149232 -106107351 - L2 LINE L2 -14 3258 2980 280 236 34 45 chr2 147150113 147150202 -106106381 - L2 LINE L2 -16 3297 3210 870 306 33 17 chr2 147151068 147151369 -106105214 - LTR16C LTR ERVL -150 341 36 21 71 0 0 chr2 147152088 147152130 -106104453 + AT_rich Low_complexity Low_complexity 1 42 0 2184 108 3 0 chr2 147152413 147152708 -106103875 - AluSq SINE Alu -15 298 3 2158 125 3 0 chr2 147152792 147153089 -106103494 - AluSx SINE Alu -2 310 13 423 277 93 47 chr2 147153805 147154194 -106102389 + LTR33 LTR ERVL 43 464 -59 22 0 0 0 chr2 147154390 147154412 -106102171 + AT_rich Low_complexity Low_complexity 1 22 0 1735 196 35 18 chr2 147154647 147154989 -106101594 + MER7A DNA MER2_type 1 346 0 1145 150 5 20 chr2 147155682 147155882 -106100701 + AluSx SINE Alu 1 197 -115 26 50 0 0 chr2 147156094 147156134 -106100449 + AT_rich Low_complexity Low_complexity 1 40 0 1841 178 34 16 chr2 147156192 147156575 -106100008 - MLT1B LTR MaLR 0 390 1 29 0 0 0 chr2 147156636 147156665 -106099918 + AT_rich Low_complexity Low_complexity 1 29 0 4219 256 88 24 chr2 147156703 147157159 -106099424 - L1ME3 LINE L1 -75 6087 5662 351 0 0 0 chr2 147157159 147157198 -106099385 + (CA)n Simple_repeat Simple_repeat 2 40 0 4219 256 88 24 chr2 147157198 147159065 -106097518 - L1ME3 LINE L1 -500 5662 3614 532 174 0 0 chr2 147159384 147159476 -106097107 + L1MA8 LINE L1 6156 6247 -44 252 239 33 65 chr2 147160341 147160433 -106096150 + L2 LINE L2 3184 3272 0 23 78 0 0 chr2 147161783 147161834 -106094749 + AT_rich Low_complexity Low_complexity 1 51 0 21 0 0 0 chr2 147162041 147162062 -106094521 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr2 147162131 147162166 -106094417 + AT_rich Low_complexity Low_complexity 1 35 0 702 257 37 16 chr2 147163362 147163549 -106093034 - MIR SINE MIR 0 262 72 2360 177 48 5 chr2 147164403 147164839 -106091744 - MSTB2 LTR MaLR 0 457 3 1620 134 0 0 chr2 147164892 147165139 -106091444 + L1PB1 LINE L1 5905 6151 0 207 0 0 0 chr2 147165548 147165571 -106091012 + (TA)n Simple_repeat Simple_repeat 1 23 0 2584 88 81 10 chr2 147165829 147166237 -106090346 - L1PA7 LINE L1 -8 6146 5710 262 0 0 0 chr2 147166237 147166267 -106090316 + L1P4 LINE L1 5541 5570 -598 * 455 319 78 40 chr2 147166259 147166682 -106089901 - L1MC/D LINE L1 -2013 5795 5357 25 51 0 0 chr2 147166820 147166859 -106089724 + AT_rich Low_complexity Low_complexity 1 39 0 25 0 0 0 chr2 147166991 147167016 -106089567 + AT_rich Low_complexity Low_complexity 1 25 0 349 318 71 0 chr2 147167186 147167384 -106089199 - L1MC/D LINE L1 -1801 4345 4134 1154 130 6 0 chr2 147168190 147168359 -106088224 + AluSp SINE Alu 133 302 -11 371 252 65 24 chr2 147168431 147168554 -106088029 - L2 LINE L2 -387 2927 2800 356 191 251 101 chr2 147168630 147168829 -106087754 - MER5C DNA MER1_type 0 324 96 599 242 59 13 chr2 147168832 147168985 -106087598 + FRAM SINE Alu 1 160 -16 317 299 28 0 chr2 147168990 147169097 -106087486 - MER5C DNA MER1_type -213 111 2 272 309 249 21 chr2 147169097 147169373 -106087210 - L2 LINE L2 -2005 1309 969 3588 58 2 0 chr2 147169377 147169825 -106086758 - L1PA7 LINE L1 -299 5855 5407 2094 76 31 0 chr2 147169825 147170112 -106086471 + L1PA7 LINE L1 5857 6153 -1 1294 311 80 66 chr2 147170140 147170648 -106085935 - L2 LINE L2 -2378 936 410 2127 118 3 7 chr2 147170648 147170954 -106085629 + AluSx SINE Alu 4 308 -4 1294 311 80 66 chr2 147170954 147171266 -106085317 - L2 LINE L2 -2904 410 104 195 42 0 0 chr2 147172290 147172314 -106084269 + (T)n Simple_repeat Simple_repeat 1 24 0 22 0 0 0 chr2 147173489 147173511 -106083072 + AT_rich Low_complexity Low_complexity 1 22 0 8400 40 5 2 chr2 147173724 147175540 -106081043 - L1PA5 LINE L1 0 6154 4328 291 81 0 0 chr2 147175540 147175577 -106081006 + tRNA-Thr-ACA tRNA tRNA 2 38 -38 535 298 55 18 chr2 147175722 147175940 -106080643 - MIR SINE MIR -13 249 24 266 203 16 0 chr2 147176489 147176553 -106080030 - MER116 DNA Mariner -15 65 1 21 0 0 0 chr2 147176586 147176607 -106079976 + AT_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr2 147176963 147176999 -106079584 + AT_rich Low_complexity Low_complexity 1 36 0 209 266 0 85 chr2 147177129 147177223 -106079360 + L2 LINE L2 3183 3268 -4 282 29 0 0 chr2 147177225 147177260 -106079323 + (CA)n Simple_repeat Simple_repeat 2 36 0 277 278 71 56 chr2 147178214 147178340 -106078243 + MIR SINE MIR 119 246 -16 264 284 53 32 chr2 147178926 147179021 -106077562 - L2 LINE L2 -37 3276 3180 21 0 0 0 chr2 147179720 147179741 -106076842 + AT_rich Low_complexity Low_complexity 1 21 0 2202 87 20 0 chr2 147181199 147181318 -106075265 + AluY SINE Alu 5 120 -191 297 0 0 0 chr2 147181318 147181351 -106075232 + (CA)n Simple_repeat Simple_repeat 2 34 0 2202 87 20 0 chr2 147181351 147181530 -106075053 + AluY SINE Alu 120 309 -2 24 0 0 0 chr2 147182074 147182098 -106074485 + AT_rich Low_complexity Low_complexity 1 24 0 2138 183 106 35 chr2 147182191 147182923 -106073660 + LTR1B LTR ERV1 3 826 0 31 26 0 0 chr2 147183226 147183264 -106073319 + AT_rich Low_complexity Low_complexity 1 38 0 349 310 158 35 chr2 147183858 147184168 -106072415 - L1ME LINE L1 -392 5729 5382 2339 214 17 63 chr2 147184172 147184761 -106071822 + MER82 DNA MER2_type 1 562 -91 1704 170 50 46 chr2 147184772 147184878 -106071705 - MER61D LTR ERV1 0 501 397 1902 118 18 4 chr2 147184878 147185208 -106071375 - AluY SINE Alu 0 334 1 1704 170 50 46 chr2 147185208 147185534 -106071049 - MER61D LTR ERV1 -104 397 1 301 177 32 0 chr2 147185566 147185628 -106070955 + MER82 DNA MER2_type 590 653 0 22 0 0 0 chr2 147185803 147185825 -106070758 + AT_rich Low_complexity Low_complexity 1 22 0 320 184 70 123 chr2 147186510 147186624 -106069959 + MER34 LTR ERV1 452 538 -4 2398 176 105 42 chr2 147187576 147188149 -106068434 - LTR8A LTR ERV1 0 727 119 2488 80 0 3 chr2 147188327 147188641 -106067942 + AluSq SINE Alu 1 313 0 294 29 0 0 chr2 147188762 147188797 -106067786 + (A)n Simple_repeat Simple_repeat 1 35 0 2283 110 0 0 chr2 147189462 147189762 -106066821 - AluSc SINE Alu -9 300 1 2107 155 31 6 chr2 147190247 147190668 -106065915 - MER84 LTR ERVI -2 505 3 22 0 0 0 chr2 147190683 147190705 -106065878 + AT_rich Low_complexity Low_complexity 1 22 0 242 111 0 0 chr2 147192831 147192867 -106063716 - L1PA16 LINE L1 -10 6156 6121 * 612 156 0 0 chr2 147192865 147192972 -106063611 + L1PA16 LINE L1 5863 5969 -182 222 407 0 0 chr2 147197463 147197571 -106059012 + (TG)n Simple_repeat Simple_repeat 1 108 0 240 274 0 0 chr2 147197888 147197939 -106058644 - L2 LINE L2 -13 3259 3209 1968 107 4 0 chr2 147198167 147198430 -106058153 + AluSp SINE Alu 24 287 -26 22 0 0 0 chr2 147199138 147199160 -106057423 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr2 147199436 147199471 -106057112 + AT_rich Low_complexity Low_complexity 1 35 0 207 289 19 0 chr2 147199994 147200046 -106056537 - L2 LINE L2 -6 3266 3214 225 0 0 0 chr2 147200409 147200434 -106056149 + (TC)n Simple_repeat Simple_repeat 2 26 0 529 284 140 25 chr2 147200684 147200927 -106055656 + L3b LINE CR1 1223 1493 -90 320 294 28 46 chr2 147200999 147201108 -106055475 + MIR SINE MIR 43 149 -113 270 311 48 19 chr2 147201397 147201500 -106055083 + MIR SINE MIR 36 141 -67 181 326 0 0 chr2 147201748 147201794 -106054789 - L2 LINE L2 -37 3276 3231 388 350 82 39 chr2 147201802 147202082 -106054501 - L2 LINE L2 -56 3257 2966 2005 99 10 26 chr2 147202118 147202422 -106054161 + AluSc SINE Alu 3 301 -8 483 48 0 0 chr2 147204834 147204896 -106051687 + (TC)n Simple_repeat Simple_repeat 1 62 0 414 154 0 0 chr2 147204901 147204966 -106051617 - AluSx SINE Alu -44 265 201 1417 113 5 0 chr2 147205008 147205211 -106051372 - AluSx SINE Alu -108 204 1 23 33 0 0 chr2 147205492 147205522 -106051061 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr2 147205858 147205882 -106050701 + AT_rich Low_complexity Low_complexity 1 24 0 1360 211 127 14 chr2 147206265 147206620 -106049963 - MSTD LTR MaLR -1 395 1 204 293 136 68 chr2 147206970 147207117 -106049466 + MIR3 SINE MIR 43 199 -9 27 29 0 0 chr2 147207136 147207170 -106049413 + AT_rich Low_complexity Low_complexity 1 34 0 1931 125 17 7 chr2 147207501 147207790 -106048793 + AluSq SINE Alu 1 292 -21 2785 271 101 54 chr2 147207821 147209310 -106047273 + L2 LINE L2 1049 2607 -707 4377 165 39 5 chr2 147209312 147210092 -106046491 - MER6 DNA MER2_type 0 865 60 602 219 12 56 chr2 147210193 147210353 -106046230 + L2 LINE L2 2692 2844 -470 870 306 33 17 chr2 147211616 147211917 -106044666 + LTR16C LTR ERVL 36 341 -150 280 236 34 45 chr2 147212783 147212872 -106043711 + L2 LINE L2 3210 3297 -16 365 335 92 19 chr2 147213753 147214013 -106042570 + L2 LINE L2 2980 3258 -14 369 0 0 0 chr2 147214857 147214898 -106041685 + (CA)n Simple_repeat Simple_repeat 2 42 0 1495 284 93 31 chr2 147215025 147215816 -106040767 + L1MC4 LINE L1 6959 7816 -226 1933 168 12 52 chr2 147215816 147216220 -106040363 - MLT1B LTR MaLR 0 390 3 1495 284 93 31 chr2 147216220 147216348 -106040235 + L1MC4 LINE L1 7816 7935 -107 1549 114 0 4 chr2 147216568 147216805 -106039778 + AluY SINE Alu 1 236 -75 226 57 29 0 chr2 147216805 147216840 -106039743 - Alu SINE Alu -35 265 230 221 0 35 0 chr2 147216947 147216976 -106039607 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 405 0 0 0 chr2 147218631 147218676 -106037907 + (TG)n Simple_repeat Simple_repeat 2 46 0 644 309 88 31 chr2 147218835 147219152 -106037431 - MLT1I LTR MaLR -1 408 74 31 44 0 0 chr2 147219697 147219742 -106036841 + AT_rich Low_complexity Low_complexity 1 45 0 289 261 144 18 chr2 147219958 147220069 -106036514 + MIR SINE MIR 106 230 -32 21 0 0 0 chr2 147220621 147220642 -106035941 + AT_rich Low_complexity Low_complexity 1 21 0 505 57 71 39 chr2 147220978 147221408 -106035175 + (TA)n Simple_repeat Simple_repeat 1 443 0 21 57 0 0 chr2 147222989 147223024 -106033559 + AT_rich Low_complexity Low_complexity 1 35 0 229 67 22 22 chr2 147223218 147223263 -106033320 + (TTTTA)n Simple_repeat Simple_repeat 1 45 0 722 24 0 0 chr2 147223263 147223345 -106033238 - L1PA8 LINE L1 -24 6148 6067 23 54 0 0 chr2 147223586 147223623 -106032960 + AT_rich Low_complexity Low_complexity 1 37 0 1787 145 31 3 chr2 147224108 147224398 -106032185 + AluSx SINE Alu 1 298 -14 21 0 0 0 chr2 147224876 147224897 -106031686 + AT_rich Low_complexity Low_complexity 1 21 0 791 173 0 0 chr2 147227159 147227292 -106029291 - FLAM_A SINE Alu 0 133 1 2264 77 15 31 chr2 147227567 147227892 -106028691 + L1PA8A LINE L1 5806 6125 -6 2475 270 63 22 chr2 147227900 147228849 -106027734 + L1MD2 LINE L1 5362 6349 -10 1311 267 80 29 chr2 147229286 147229762 -106026821 + LTR40a LTR ERVL 1 500 -19 396 275 113 14 chr2 147229789 147229931 -106026652 + HERVL68 LTR ERVL 4127 4282 -1248 345 255 85 93 chr2 147229929 147230176 -106026407 + HERVL68 LTR ERVL 2027 2271 -766 * 730 253 6 6 chr2 147230229 147230403 -106026180 + LTR40a LTR ERVL 346 519 0 1966 130 75 26 chr2 147231269 147231616 -106024967 + THE1B LTR MaLR 1 364 0 201 262 0 0 chr2 147232942 147232984 -106023599 - L3 LINE CR1 -5 1572 1531 183 348 13 80 chr2 147233736 147233960 -106022623 + L2 LINE L2 2560 2768 -546 1970 117 7 3 chr2 147234146 147234453 -106022130 - L1MA3 LINE L1 -1 6304 5997 22 0 0 0 chr2 147234811 147234833 -106021750 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 147234997 147235019 -106021564 + AT_rich Low_complexity Low_complexity 1 22 0 423 242 66 0 chr2 147235020 147235111 -106021472 - U6 snRNA snRNA -5 102 6 283 304 83 40 chr2 147235527 147235720 -106020863 - MIR SINE MIR -49 213 5 23 0 0 0 chr2 147236404 147236427 -106020156 + AT_rich Low_complexity Low_complexity 1 23 0 680 254 36 40 chr2 147236456 147236680 -106019903 + MIR SINE MIR 25 247 -15 1962 148 0 0 chr2 147236762 147237082 -106019501 + AluSx SINE Alu 1 320 0 195 42 0 0 chr2 147237559 147237583 -106019000 + (A)n Simple_repeat Simple_repeat 1 24 0 2030 181 19 14 chr2 147238768 147239187 -106017396 - L1MC2 LINE L1 -7 6337 5917 515 355 61 4 chr2 147239423 147239654 -106016929 + MIR SINE MIR 4 247 -15 22 0 0 0 chr2 147240805 147240827 -106015756 + AT_rich Low_complexity Low_complexity 1 22 0 352 282 64 64 chr2 147241485 147241673 -106014910 + MLT1L LTR MaLR 420 607 -8 1406 194 205 14 chr2 147242104 147242460 -106014123 + MSTA LTR MaLR 1 424 -4 8501 155 42 37 chr2 147242466 147244029 -106012554 + MLT1L-int LTR MaLR 1 1580 0 1671 148 167 34 chr2 147244029 147244407 -106012176 + MSTA LTR MaLR 1 428 0 21 57 0 0 chr2 147244628 147244663 -106011920 + AT_rich Low_complexity Low_complexity 1 35 0 242 231 99 33 chr2 147244761 147244852 -106011731 + MLT1J2 LTR MaLR 58 154 -296 463 287 96 43 chr2 147246516 147246746 -106009837 + MLT1J2 LTR MaLR 205 446 -4 27 100 0 0 chr2 147246807 147246897 -106009686 + AT_rich Low_complexity Low_complexity 1 90 0 186 71 0 0 chr2 147247425 147247453 -106009130 + (CCA)n Simple_repeat Simple_repeat 1 28 0 183 80 0 0 chr2 147247643 147247668 -106008915 + (T)n Simple_repeat Simple_repeat 1 25 0 247 210 32 32 chr2 147248853 147248915 -106007668 + MLT1L LTR MaLR 193 254 -361 1253 203 56 63 chr2 147252121 147252516 -106004067 + MER39 LTR ERV1 291 682 -25 616 270 80 10 chr2 147252873 147253073 -106003510 - MIR SINE MIR -37 225 12 210 294 212 0 chr2 147253076 147253161 -106003422 + L3 LINE CR1 1458 1560 -17 216 196 0 0 chr2 147253432 147253478 -106003105 + A-rich Low_complexity Low_complexity 3 48 0 2013 136 3 3 chr2 147253555 147253857 -106002726 + AluSx SINE Alu 2 303 -9 410 211 8 49 chr2 147256826 147256945 -105999638 + LTR37B LTR ERV1 8 121 -347 644 207 90 58 chr2 147256945 147256978 -105999605 + MER3 DNA MER1_type 2 32 -177 2642 129 26 2 chr2 147256978 147257405 -105999178 + LTR23 LTR ERV1 1 437 0 644 207 90 58 chr2 147257405 147257556 -105999027 + MER3 DNA MER1_type 32 192 -17 245 133 0 44 chr2 147257556 147257601 -105998982 + LTR48B LTR ERV1 1 43 -601 504 195 195 98 chr2 147257637 147258139 -105998444 + LTR48 LTR ERV1 163 594 -1 1054 252 44 3 chr2 147258159 147258500 -105998083 + LTR37B LTR ERV1 114 468 0 345 235 153 0 chr2 147258562 147258660 -105997923 + MER34 LTR ERV1 13 125 -417 799 234 59 61 chr2 147258671 147259097 -105997486 + MER34 LTR ERV1 77 540 -2 22 35 0 0 chr2 147259392 147259421 -105997162 + AT_rich Low_complexity Low_complexity 1 29 0 4256 110 31 16 chr2 147260825 147261499 -105995084 + L1PA14 LINE L1 5478 6161 0 24 0 0 0 chr2 147261530 147261554 -105995029 + AT_rich Low_complexity Low_complexity 1 24 0 406 214 0 11 chr2 147261566 147261655 -105994928 + LTR37B LTR ERV1 53 140 -328 945 225 34 28 chr2 147261735 147262035 -105994548 + LTR37B LTR ERV1 138 468 0 455 321 91 47 chr2 147262086 147262404 -105994179 - MER102b DNA MER1_type 0 341 10 2040 186 50 14 chr2 147262744 147263263 -105993320 + MLT1F LTR MaLR 1 536 -6 241 245 258 13 chr2 147263579 147263734 -105992849 - L2 LINE L2 -167 3146 2954 863 248 114 72 chr2 147263910 147264631 -105991952 - HAL1 LINE L1 0 2507 1757 1618 132 4 0 chr2 147264699 147264934 -105991649 + THE1B LTR MaLR 124 359 -5 439 274 86 38 chr2 147265327 147265513 -105991070 - L2 LINE L2 -556 2758 2564 584 305 64 28 chr2 147266567 147266849 -105989734 + L2 LINE L2 2434 2725 -589 437 316 190 0 chr2 147267185 147267359 -105989224 + L2 LINE L2 2719 2925 -389 3923 134 85 22 chr2 147267497 147268211 -105988372 + L1PA10 LINE L1 5307 6065 -103 518 262 36 149 chr2 147268258 147268620 -105987963 + L2 LINE L2 2978 3298 -15 27 100 0 0 chr2 147269324 147269414 -105987169 + AT_rich Low_complexity Low_complexity 1 90 0 4320 135 85 21 chr2 147269712 147270503 -105986080 - L1PA10 LINE L1 -5 6163 5323 1578 122 49 0 chr2 147270504 147270751 -105985832 - L1PA7 LINE L1 -6 6148 5890 7586 103 11 3 chr2 147270753 147271866 -105984717 + L1P LINE L1 1944 3065 -3081 1933 124 4 0 chr2 147272449 147272722 -105983861 + AluSg SINE Alu 35 308 -2 24 0 0 0 chr2 147273230 147273254 -105983329 + AT_rich Low_complexity Low_complexity 1 24 0 267 31 0 0 chr2 147273889 147273921 -105982662 + (CA)n Simple_repeat Simple_repeat 1 32 0 2438 50 0 20 chr2 147274058 147274361 -105982222 + AluY SINE Alu 2 298 -13 2279 120 0 0 chr2 147275421 147275730 -105980853 - AluSq SINE Alu -1 312 4 2264 84 0 34 chr2 147276342 147276664 -105979919 + AluY SINE Alu 1 311 0 368 237 32 45 chr2 147276874 147276900 -105979683 + MER103 DNA DNA 11 36 -130 2572 112 11 8 chr2 147276900 147277274 -105979309 + THE1C LTR MaLR 1 375 0 368 237 32 45 chr2 147277274 147277403 -105979180 + MER103 DNA DNA 36 164 -2 267 261 87 0 chr2 147277687 147277756 -105978827 - MIR SINE MIR -100 108 34 200 235 20 0 chr2 147278159 147278210 -105978373 + CT-rich Low_complexity Low_complexity 1 52 0 2081 147 0 0 chr2 147278733 147279045 -105977538 - AluSx SINE Alu 0 312 1 21 0 0 0 chr2 147279053 147279074 -105977509 + AT_rich Low_complexity Low_complexity 1 21 0 2190 103 10 0 chr2 147279097 147279397 -105977186 + AluSg SINE Alu 1 303 -7 516 282 24 44 chr2 147280022 147280320 -105976263 - AluYa5 SINE Alu 0 311 20 2236 89 6 22 chr2 147280744 147281060 -105975523 - AluY SINE Alu 0 311 1 378 220 0 80 chr2 147281163 147281263 -105975320 + MER2 DNA MER2_type 7 98 -247 3285 153 19 43 chr2 147281263 147281449 -105975134 - MER6A DNA MER2_type -260 605 416 1177 226 82 18 chr2 147281449 147281728 -105974855 - AluJb SINE Alu -5 297 1 3285 153 19 43 chr2 147281728 147282161 -105974422 - MER6A DNA MER2_type -449 416 1 609 170 0 0 chr2 147282161 147282273 -105974310 + MER2 DNA MER2_type 99 210 -135 736 112 0 9 chr2 147282374 147282490 -105974093 + MER2 DNA MER2_type 96 210 -135 2335 149 73 0 chr2 147283471 147283868 -105972715 + MSTA LTR MaLR 3 428 0 8516 180 14 35 chr2 147283872 147285553 -105971030 + MSTA-int LTR MaLR 5 1651 0 1008 198 114 0 chr2 147285553 147285755 -105970828 + MSTA LTR MaLR 1 225 -203 4540 148 21 63 chr2 147285970 147287254 -105969329 + L1PA16 LINE L1 4898 6150 -16 14811 162 51 21 chr2 147287273 147293460 -105963123 + L1PA10 LINE L1 10 6480 -3 26 64 0 0 chr2 147294873 147294920 -105961663 + AT_rich Low_complexity Low_complexity 1 47 0 180 0 0 0 chr2 147295508 147295528 -105961055 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1740 142 78 0 chr2 147296396 147296677 -105959906 - AluSq SINE Alu -10 303 1 198 71 0 0 chr2 147296869 147296897 -105959686 + (TG)n Simple_repeat Simple_repeat 2 29 0 198 71 0 0 chr2 147296954 147296982 -105959601 + (TG)n Simple_repeat Simple_repeat 2 29 0 351 78 0 0 chr2 147297039 147297090 -105959493 + (TG)n Simple_repeat Simple_repeat 1 51 0 1350 287 55 40 chr2 147298743 147299417 -105957166 + L2 LINE L2 2493 3195 -118 929 172 54 59 chr2 147299868 147300089 -105956494 - LTR32 LTR ERVL -5 466 247 279 227 106 0 chr2 147300158 147300224 -105956359 - LTR32 LTR ERVL -387 84 12 191 86 0 29 chr2 147302325 147302360 -105954223 + (TATATG)n Simple_repeat Simple_repeat 2 35 0 2227 125 0 0 chr2 147302838 147303149 -105953434 - AluSx SINE Alu -1 311 1 29 0 0 0 chr2 147303708 147303737 -105952846 + AT_rich Low_complexity Low_complexity 1 29 0 220 367 33 40 chr2 147303943 147304093 -105952490 - L2 LINE L2 -226 3046 2898 283 320 31 0 chr2 147304159 147304287 -105952296 - MIR SINE MIR 0 262 131 214 368 53 13 chr2 147304352 147304504 -105952079 - L2 LINE L2 -465 2849 2692 830 152 37 6 chr2 147304639 147304803 -105951780 - L1MA8 LINE L1 -2 6289 6121 1064 182 32 28 chr2 147304803 147305056 -105951527 + L1MA8 LINE L1 5867 6120 -171 879 123 0 55 chr2 147305827 147305973 -105950610 - FLAM_C SINE Alu 0 143 6 734 270 100 25 chr2 147306950 147307191 -105949392 - L2 LINE L2 -2 3311 3053 2024 296 128 38 chr2 147307225 147308271 -105948312 - L2 LINE L2 -825 2489 1350 21 0 0 0 chr2 147308341 147308362 -105948221 + AT_rich Low_complexity Low_complexity 1 21 0 189 320 0 0 chr2 147310136 147310186 -105946397 - L2 LINE L2 -7 3265 3216 227 73 49 0 chr2 147311590 147311631 -105944952 + T-rich Low_complexity Low_complexity 6 48 0 1479 215 3 7 chr2 147311678 147311980 -105944603 + AluJo SINE Alu 6 306 -6 218 259 19 0 chr2 147312178 147312232 -105944351 + L3 LINE CR1 1520 1574 -3 255 203 51 0 chr2 147314335 147314394 -105942189 + CT-rich Low_complexity Low_complexity 3 64 0 654 311 47 74 chr2 147314394 147315101 -105941482 - L2 LINE L2 -9 3304 2581 2033 128 0 20 chr2 147315154 147315452 -105941131 + AluSx SINE Alu 1 292 -20 213 39 0 0 chr2 147315452 147315478 -105941105 + (GGAA)n Simple_repeat Simple_repeat 3 28 0 1124 142 0 0 chr2 147316397 147316559 -105940024 + AluSx SINE Alu 1 162 -150 214 326 51 20 chr2 147316698 147316796 -105939787 - L2 LINE L2 -2 3311 3211 1778 164 21 0 chr2 147317790 147318077 -105938506 + AluSx SINE Alu 5 297 -15 457 245 0 10 chr2 147318573 147318671 -105937912 + MER21B LTR ERV1 1 97 -766 1335 253 82 27 chr2 147318709 147319314 -105937269 + MER21B LTR ERV1 98 784 -79 201 182 0 0 chr2 147320679 147320712 -105935871 + A-rich Low_complexity Low_complexity 1 33 0 252 222 0 0 chr2 147320744 147320789 -105935794 + LTR16C LTR ERVL 445 489 -2 236 188 0 21 chr2 147321731 147321779 -105934804 - Charlie8 DNA MER1_type -2284 133 87 278 329 120 0 chr2 147321971 147322129 -105934454 + MIR3 SINE MIR 18 194 -14 25 31 0 0 chr2 147323935 147323967 -105932616 + AT_rich Low_complexity Low_complexity 1 32 0 778 269 104 18 chr2 147324040 147324367 -105932216 + L2 LINE L2 1268 1622 -1692 279 353 87 28 chr2 147325181 147325720 -105930863 - L2 LINE L2 -932 2382 1812 1851 133 54 7 chr2 147326676 147326970 -105929613 + AluSc SINE Alu 2 309 0 2219 112 122 8 chr2 147327065 147327449 -105929134 + MSTA LTR MaLR 1 428 0 793 299 97 18 chr2 147327802 147328194 -105928389 + MLT1J2 LTR MaLR 1 423 -27 603 247 7 0 chr2 147328196 147328350 -105928233 + MIR SINE MIR 82 236 -26 2677 243 61 64 chr2 147329825 147331715 -105924868 - L1ME1 LINE L1 -4 6162 4282 2173 249 100 34 chr2 147331779 147332715 -105923868 + L1MB3 LINE L1 3283 4280 -1866 1864 150 3 0 chr2 147332932 147333226 -105923357 - AluSq SINE Alu -18 295 1 310 284 18 9 chr2 147334192 147334301 -105922282 - L1MC/D LINE L1 -1965 5843 5734 240 350 21 10 chr2 147334386 147334483 -105922100 + MLT1J LTR MaLR 100 197 -314 2227 109 0 0 chr2 147334512 147334816 -105921767 + AluY SINE Alu 1 304 -7 24 32 0 0 chr2 147335278 147335309 -105921274 + AT_rich Low_complexity Low_complexity 1 31 0 195 287 172 11 chr2 147335489 147335576 -105921007 + MIR SINE MIR 140 240 -22 206 324 14 0 chr2 147335739 147335813 -105920770 + MIR SINE MIR 67 141 -121 388 246 70 75 chr2 147336647 147336834 -105919749 + HAL1 LINE L1 9 194 -2313 272 327 50 10 chr2 147336906 147337007 -105919576 + MER91C DNA MER1_type 1 105 -35 258 278 184 67 chr2 147337020 147337243 -105919340 + HAL1 LINE L1 227 475 -2032 3951 249 46 13 chr2 147337311 147338394 -105918189 + L1MB8 LINE L1 452 1570 -5289 3723 200 66 39 chr2 147338382 147339439 -105917144 + L1MB3 LINE L1 5095 6179 -4 * 1574 285 65 20 chr2 147339458 147340419 -105916164 + L1MB8 LINE L1 1544 2687 -4451 1949 261 40 18 chr2 147340446 147341487 -105915096 + L1MEc LINE L1 1731 2756 -3459 * 4109 210 35 10 chr2 147341479 147341498 -105915085 + L1MB8 LINE L1 5535 5552 -1437 2050 146 0 0 chr2 147341498 147341800 -105914783 + AluSx SINE Alu 2 303 -9 4109 210 35 10 chr2 147341800 147343201 -105913382 + L1MB8 LINE L1 5552 6984 -5 1007 262 36 61 chr2 147343209 147343621 -105912962 + HAL1 LINE L1 1467 1868 -639 563 261 87 63 chr2 147343660 147343897 -105912686 + HAL1 LINE L1 2064 2317 -190 1812 176 0 13 chr2 147343897 147344203 -105912380 + AluJb SINE Alu 1 302 -10 563 261 87 63 chr2 147344203 147344379 -105912204 + HAL1 LINE L1 2317 2487 -20 195 129 0 0 chr2 147344380 147344411 -105912172 + (TA)n Simple_repeat Simple_repeat 2 32 0 4820 145 11 38 chr2 147344765 147345117 -105911466 - L1PA16 LINE L1 -3 6163 5803 2422 71 0 0 chr2 147345117 147345426 -105911157 - AluY SINE Alu -2 309 1 4820 145 11 38 chr2 147345426 147345929 -105910654 - L1PA16 LINE L1 -363 5803 5333 200 217 0 0 chr2 147346110 147346156 -105910427 + T-rich Low_complexity Low_complexity 1 46 0 30 27 0 0 chr2 147346928 147346965 -105909618 + AT_rich Low_complexity Low_complexity 1 37 0 235 290 130 10 chr2 147348003 147348103 -105908480 + L2 LINE L2 3156 3267 -5 537 89 13 0 chr2 147348942 147349021 -105907562 - MADE1 DNA Mariner 0 80 1 423 323 52 26 chr2 147350241 147350396 -105906187 + MIR SINE MIR 2 160 -102 297 361 25 13 chr2 147350558 147350716 -105905867 + MIR SINE MIR 82 241 -21 498 17 0 0 chr2 147350936 147350995 -105905588 + (TATATG)n Simple_repeat Simple_repeat 2 60 0 21 36 0 0 chr2 147351077 147351105 -105905478 + AT_rich Low_complexity Low_complexity 1 28 0 270 336 106 0 chr2 147351422 147351526 -105905057 + L2 LINE L2 3117 3231 -41 292 364 29 42 chr2 147351701 147351940 -105904643 - L2 LINE L2 -223 3049 2814 1286 98 124 0 chr2 147352089 147352282 -105904301 - AluSc SINE Alu -10 299 83 1219 258 50 14 chr2 147353043 147353461 -105903122 - L1M4 LINE L1 -1099 5047 4615 321 239 0 34 chr2 147353469 147353557 -105903026 - L1M4 LINE L1 -1836 4310 4226 2050 84 38 3 chr2 147353568 147353855 -105902728 - AluSg SINE Alu -13 297 1 21 0 0 0 chr2 147354018 147354039 -105902544 + AT_rich Low_complexity Low_complexity 1 21 0 2576 23 3 3 chr2 147354044 147354347 -105902236 + AluYa5 SINE Alu 1 303 -8 1090 286 37 27 chr2 147354395 147354906 -105901677 - L1M4 LINE L1 -2168 3978 3463 826 203 96 5 chr2 147355087 147355274 -105901309 + MER3 DNA MER1_type 1 204 -5 552 282 50 22 chr2 147355292 147355569 -105901014 - L1M4 LINE L1 -2833 3313 3029 1365 71 0 0 chr2 147355571 147355741 -105900842 - AluY SINE Alu -3 308 139 690 250 88 7 chr2 147355743 147356051 -105900532 - L1M4 LINE L1 -3107 3039 2707 238 326 0 0 chr2 147356078 147356164 -105900419 - L1M4 LINE L1 -3562 2584 2499 275 203 0 0 chr2 147356435 147356494 -105900089 - L1MB7 LINE L1 -216 5968 5910 2320 66 13 10 chr2 147357359 147357664 -105898919 + AluY SINE Alu 1 306 -5 254 393 57 19 chr2 147358154 147358365 -105898218 - MIR SINE MIR -31 231 13 26 0 0 0 chr2 147358598 147358624 -105897959 + AT_rich Low_complexity Low_complexity 1 26 0 225 0 0 0 chr2 147358942 147358967 -105897616 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2685 32 0 0 chr2 147359832 147360143 -105896440 + AluY SINE Alu 1 311 0 2189 132 6 3 chr2 147360230 147360563 -105896020 + MER1B DNA MER1_type 4 337 0 2529 207 55 28 chr2 147360731 147361347 -105895236 + L1MC2 LINE L1 6143 7741 -1 260 392 38 32 chr2 147361567 147361725 -105894858 + MIR SINE MIR 30 188 -74 1457 211 40 10 chr2 147362696 147362817 -105893766 + AluJo SINE Alu 1 117 -195 216 67 0 0 chr2 147362817 147362847 -105893736 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 1457 211 40 10 chr2 147362847 147363028 -105893555 + AluJo SINE Alu 117 312 0 28 29 0 0 chr2 147363131 147363166 -105893417 + AT_rich Low_complexity Low_complexity 1 35 0 405 0 0 0 chr2 147364002 147364047 -105892536 + (CA)n Simple_repeat Simple_repeat 2 46 0 302 242 77 0 chr2 147364392 147364483 -105892100 - MIR3 SINE MIR -7 201 104 492 320 44 11 chr2 147364570 147364751 -105891832 - MIR SINE MIR -74 188 2 294 257 53 71 chr2 147364783 147364896 -105891687 + L2 LINE L2 3191 3301 -12 3371 122 26 0 chr2 147364972 147365504 -105891079 - L1PA16 LINE L1 -9 6157 5612 1162 120 0 0 chr2 147365505 147365692 -105890891 + L1PA16 LINE L1 5436 5622 -534 2022 175 3 0 chr2 147365962 147366302 -105890281 + MER7A DNA MER2_type 7 345 -1 209 282 136 39 chr2 147366340 147366443 -105890140 + L2 LINE L2 3201 3313 0 962 249 155 45 chr2 147366503 147366928 -105889655 + MER77 LTR ERV1 54 525 -80 2294 100 3 0 chr2 147366928 147367228 -105889355 + AluSq SINE Alu 1 301 -12 243 272 68 10 chr2 147367505 147367608 -105888975 + MIR SINE MIR 82 190 -72 270 208 26 52 chr2 147368058 147368135 -105888448 + MER5B DNA MER1_type 86 160 -18 1496 222 8 22 chr2 147368140 147368510 -105888073 + MLT1A1 LTR MaLR 1 365 0 24 0 0 0 chr2 147368563 147368587 -105887996 + AT_rich Low_complexity Low_complexity 1 24 0 1898 166 70 8 chr2 147368739 147369125 -105887458 + MSTA LTR MaLR 1 410 -18 337 292 34 0 chr2 147369799 147369888 -105886695 - MIR SINE MIR -77 185 94 13365 187 29 27 chr2 147371404 147372731 -105883852 - L1MA4A LINE L1 -6 6999 5676 2056 105 3 68 chr2 147372731 147373054 -105883529 - AluSx SINE Alu -8 304 3 13365 187 29 27 chr2 147373054 147375879 -105880704 - L1MA4A LINE L1 -1329 5676 2839 2319 236 35 10 chr2 147375872 147376385 -105880198 - L1MA4A LINE L1 -5403 1446 921 * 276 278 155 52 chr2 147376488 147376682 -105879901 + MLT1K LTR MaLR 373 586 -2 22 0 0 0 chr2 147376901 147376923 -105879660 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr2 147377111 147377141 -105879442 + AT_rich Low_complexity Low_complexity 1 30 0 27 49 0 0 chr2 147377171 147377212 -105879371 + AT_rich Low_complexity Low_complexity 1 41 0 942 239 34 5 chr2 147377648 147377857 -105878726 + MLT1A1 LTR MaLR 1 215 -150 1522 76 0 5 chr2 147377870 147378081 -105878502 + L1PA8A LINE L1 5894 6103 -28 631 229 0 0 chr2 147378178 147378300 -105878283 + MLT1A1 LTR MaLR 244 365 0 558 347 0 31 chr2 147378530 147378726 -105877857 + MIR SINE MIR 47 236 -26 944 233 96 23 chr2 147379739 147380108 -105876475 + MSTC LTR MaLR 1 422 -6 902 207 49 5 chr2 147380117 147380320 -105876263 + MSTC-int LTR MaLR 3 214 -1521 345 186 14 29 chr2 147380320 147380390 -105876193 + Tigger2 DNA MER2_type 1 69 -2649 * 2217 156 19 34 chr2 147380380 147380791 -105875792 + Tigger2 DNA MER2_type 2273 2677 -41 273 125 0 0 chr2 147380838 147380878 -105875705 + MSTD LTR MaLR 354 393 -3 2013 122 28 0 chr2 147380948 147381234 -105875349 - AluSx SINE Alu -16 296 3 2070 98 7 0 chr2 147382765 147383062 -105873521 + AluY SINE Alu 1 299 -12 789 110 0 0 chr2 147383064 147383182 -105873401 + (TA)n Simple_repeat Simple_repeat 1 118 0 188 146 91 36 chr2 147383439 147383494 -105873089 + MIR SINE MIR 131 188 -74 2458 75 0 0 chr2 147383506 147383812 -105872771 - AluY SINE Alu -5 306 1 30 59 0 0 chr2 147383821 147383872 -105872711 + AT_rich Low_complexity Low_complexity 1 51 0 315 0 0 0 chr2 147384136 147384171 -105872412 + (T)n Simple_repeat Simple_repeat 1 35 0 1465 187 71 55 chr2 147385483 147385847 -105870736 - MLT1B LTR MaLR -17 373 4 215 30 0 30 chr2 147386271 147386304 -105870279 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 210 278 111 0 chr2 147386406 147386460 -105870123 - L2 LINE L2 -3 3269 3210 557 280 147 0 chr2 147388202 147388359 -105868224 - MER5A DNA MER1_type 0 189 10 24 32 0 0 chr2 147388469 147388500 -105868083 + AT_rich Low_complexity Low_complexity 1 31 0 270 392 144 14 chr2 147389527 147389894 -105866689 - MLT1K LTR MaLR -57 531 117 24 39 0 0 chr2 147390373 147390399 -105866184 + AT_rich Low_complexity Low_complexity 1 26 0 376 333 82 11 chr2 147391317 147391500 -105865083 + MIR SINE MIR 21 216 -46 198 103 0 0 chr2 147391530 147391559 -105865024 + (CTG)n Simple_repeat Simple_repeat 2 30 0 185 182 18 0 chr2 147392298 147392353 -105864230 + (CA)n Simple_repeat Simple_repeat 2 57 0 223 250 17 0 chr2 147392367 147392427 -105864156 + (CA)n Simple_repeat Simple_repeat 1 61 0 324 215 14 7 chr2 147392441 147392585 -105863998 + (CA)n Simple_repeat Simple_repeat 1 145 0 216 200 20 0 chr2 147392599 147392649 -105863934 + (CA)n Simple_repeat Simple_repeat 1 51 0 23 0 0 0 chr2 147393194 147393217 -105863366 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr2 147393814 147393839 -105862744 + AT_rich Low_complexity Low_complexity 1 25 0 24 32 0 0 chr2 147394826 147394857 -105861726 + AT_rich Low_complexity Low_complexity 1 31 0 1028 207 18 9 chr2 147395007 147395224 -105861359 + MER20 DNA MER1_type 1 219 0 480 361 101 19 chr2 147395277 147395695 -105860888 - L2 LINE L2 -557 2757 2306 252 111 0 0 chr2 147396306 147396351 -105860232 + (GA)n Simple_repeat Simple_repeat 2 46 0 207 330 9 9 chr2 147396535 147396641 -105859942 + (TA)n Simple_repeat Simple_repeat 1 106 0 492 284 36 53 chr2 147396644 147396869 -105859714 + MIR SINE MIR 37 257 -5 283 395 115 0 chr2 147397319 147397476 -105859107 + MIR3 SINE MIR 13 187 -21 2027 132 7 0 chr2 147397553 147397848 -105858735 + AluSq SINE Alu 3 299 -14 1809 62 12 39 chr2 147397848 147398104 -105858479 + AluY SINE Alu 41 289 -22 186 103 0 0 chr2 147398104 147398133 -105858450 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 2178 64 0 24 chr2 147399520 147399815 -105856768 - AluY SINE Alu -7 304 17 543 281 33 13 chr2 147400092 147400245 -105856338 - LTR40a LTR ERVL -120 399 244 553 25 25 13 chr2 147400249 147400328 -105856255 + (TTTC)n Simple_repeat Simple_repeat 3 82 0 29 0 0 0 chr2 147400371 147400400 -105856183 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr2 147400726 147400750 -105855833 + AT_rich Low_complexity Low_complexity 1 24 0 188 270 0 16 chr2 147400866 147400929 -105855654 + L2 LINE L2 3154 3215 -98 27 0 0 0 chr2 147401489 147401516 -105855067 + AT_rich Low_complexity Low_complexity 1 27 0 26 0 0 0 chr2 147402257 147402283 -105854300 + AT_rich Low_complexity Low_complexity 1 26 0 195 346 65 54 chr2 147402333 147402518 -105854065 - MIR SINE MIR -42 220 34 1710 179 105 10 chr2 147402927 147403318 -105853265 + MSTA LTR MaLR 1 428 0 2020 126 0 0 chr2 147403347 147403625 -105852958 - AluSx SINE Alu -34 278 1 180 375 34 11 chr2 147404242 147404330 -105852253 - L2 LINE L2 -508 2806 2717 24 53 0 0 chr2 147404396 147404434 -105852149 + AT_rich Low_complexity Low_complexity 1 38 0 243 322 161 35 chr2 147404965 147405251 -105851332 + L2 LINE L2 2164 2485 -829 2558 261 51 32 chr2 147405370 147406435 -105850148 - L1MD2 LINE L1 -222 6397 5308 721 277 99 49 chr2 147406419 147406892 -105849691 - L1MD2 LINE L1 -5140 1269 773 * 301 361 83 22 chr2 147407451 147407811 -105848772 + L2 LINE L2 2596 2977 -337 236 250 62 62 chr2 147407924 147408036 -105848547 + L2 LINE L2 2974 3085 -187 430 296 24 16 chr2 147408322 147408447 -105848136 + MIR SINE MIR 49 174 -88 251 70 0 23 chr2 147408637 147408680 -105847903 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 1158 186 4 9 chr2 147408680 147408911 -105847672 - L1PB4 LINE L1 -12 6144 5915 185 279 51 25 chr2 147409976 147410055 -105846528 - MIR SINE MIR -69 193 113 543 260 154 18 chr2 147410449 147410809 -105845774 + MLT1J2 LTR MaLR 8 447 -3 2266 81 0 0 chr2 147410848 147411187 -105845396 + AluY SINE Alu 1 339 0 3538 140 0 2 chr2 147411384 147411970 -105844613 + L1P LINE L1 1263 1847 -4299 3269 268 51 16 chr2 147411990 147413082 -105843501 - L1MEc LINE L1 -5227 1169 39 889 306 57 17 chr2 147413089 147413543 -105843040 + L2 LINE L2 2700 3184 -129 1499 221 36 71 chr2 147413693 147414214 -105842369 + MLT1D LTR MaLR 1 503 -2 1414 211 0 57 chr2 147414322 147414653 -105841930 - AluJo SINE Alu 0 312 1 1559 257 137 75 chr2 147414658 147415845 -105840738 - HAL1 LINE L1 -1244 1263 4 32 0 0 0 chr2 147416346 147416378 -105840205 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr2 147416455 147416476 -105840107 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr2 147417313 147417344 -105839239 + AT_rich Low_complexity Low_complexity 1 31 0 2113 132 48 25 chr2 147417595 147417951 -105838632 + THE1B LTR MaLR 1 364 0 2022 133 72 20 chr2 147418725 147419071 -105837512 - THE1B LTR MaLR 0 364 1 236 407 101 20 chr2 147420426 147420625 -105835958 - L2 LINE L2 -2 3270 3056 627 171 24 0 chr2 147421223 147421346 -105835237 - L1MD3 LINE L1 0 7995 7870 26 64 0 0 chr2 147421737 147421784 -105834799 + AT_rich Low_complexity Low_complexity 1 47 0 565 258 15 8 chr2 147421953 147422091 -105834492 + MLT1J2 LTR MaLR 35 211 -289 290 290 65 43 chr2 147422154 147422292 -105834291 + MLT1J2 LTR MaLR 283 423 -27 1184 152 25 0 chr2 147422876 147423073 -105833510 + L1PA15 LINE L1 5961 6162 -3 925 174 18 18 chr2 147424139 147424357 -105832226 - L1MB7 LINE L1 -7 6177 5960 583 319 27 98 chr2 147424741 147425151 -105831432 + LTR67 LTR ERVL 2 382 -175 1641 125 0 4 chr2 147425877 147426161 -105830422 - AluSc SINE Alu 0 324 42 368 281 212 34 chr2 147426173 147426465 -105830118 + MLT1L LTR MaLR 258 601 -14 618 283 29 113 chr2 147427041 147427458 -105829125 - LTR33A LTR ERVL -62 461 80 291 300 154 0 chr2 147427473 147427583 -105829000 + L2 LINE L2 3187 3313 0 391 262 140 28 chr2 147427922 147428136 -105828447 + L1M4 LINE L1 2942 3179 -2967 1844 134 4 0 chr2 147428324 147428599 -105827984 + AluSg SINE Alu 1 276 -34 234 0 0 0 chr2 147428606 147428632 -105827951 + (CCCCG)n Simple_repeat Simple_repeat 4 29 0 23 0 0 0 chr2 147431658 147431681 -105824902 + AT_rich Low_complexity Low_complexity 1 23 0 189 74 0 0 chr2 147431728 147431755 -105824828 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 21 0 0 0 chr2 147432451 147432472 -105824111 + AT_rich Low_complexity Low_complexity 1 21 0 297 51 0 0 chr2 147433118 147433157 -105823426 + (CA)n Simple_repeat Simple_repeat 2 40 0 409 100 14 0 chr2 147433272 147433342 -105823241 + L1MA7 LINE L1 6213 6283 -8 431 196 137 0 chr2 147434065 147434196 -105822387 - FLAM_C SINE Alu 0 146 2 2219 78 0 63 chr2 147434489 147434820 -105821763 - AluY SINE Alu -1 310 1 2280 98 0 16 chr2 147436319 147436634 -105819949 - AluY SINE Alu -1 310 1 368 241 18 0 chr2 147438494 147438515 -105818068 - L1MA4A LINE L1 0 6303 6283 11658 226 43 46 chr2 147438515 147439825 -105816758 - L1PB4 LINE L1 -6 6852 5539 1467 132 18 0 chr2 147439825 147440052 -105816531 - AluSq SINE Alu -7 306 76 11658 226 43 46 chr2 147440052 147445531 -105811052 - L1PB4 LINE L1 -1319 5539 11 24 0 0 0 chr2 147445743 147445767 -105810816 + AT_rich Low_complexity Low_complexity 1 24 0 254 305 152 9 chr2 147446029 147446134 -105810449 - L2 LINE L2 -2 3311 3192 32 67 0 0 chr2 147446652 147446712 -105809871 + AT_rich Low_complexity Low_complexity 1 60 0 812 221 147 17 chr2 147447044 147447392 -105809191 + L1M4 LINE L1 945 1337 -5205 1119 216 41 12 chr2 147447392 147447637 -105808946 + AluJo SINE Alu 40 291 -21 2033 252 33 24 chr2 147447701 147448340 -105808243 + L1M4 LINE L1 1354 1998 -4648 814 321 44 31 chr2 147448341 147448892 -105807691 + L1M3d LINE L1 360 1264 -5389 1167 167 5 9 chr2 147498997 147499207 -105757376 - MER47A DNA MER2_type -115 251 43 1145 156 22 74 chr2 147499206 147499305 -105757278 - MER54A LTR ERVL -677 224 121 * 2290 90 10 0 chr2 147499305 147499605 -105756978 + AluSp SINE Alu 1 303 -10 1145 156 22 74 chr2 147499605 147499736 -105756847 - MER54A LTR ERVL -780 121 6 403 156 0 0 chr2 147500861 147500925 -105755658 + FRAM SINE Alu 69 132 -34 2072 125 16 0 chr2 147500977 147501281 -105755302 - AluSq SINE Alu -4 309 1 252 0 0 0 chr2 147501289 147501317 -105755266 + (A)n Simple_repeat Simple_repeat 1 28 0 21 0 0 0 chr2 147501328 147501349 -105755234 + AT_rich Low_complexity Low_complexity 1 21 0 210 37 0 0 chr2 147501547 147501574 -105755009 + (CA)n Simple_repeat Simple_repeat 1 27 0 2136 128 0 10 chr2 147502127 147502440 -105754143 - AluSg SINE Alu 0 310 1 392 354 88 0 chr2 147502901 147503093 -105753490 - L3 LINE CR1 -3 1574 1366 214 393 37 9 chr2 147503106 147503213 -105753370 - L2 LINE L2 0 3272 3163 807 171 0 20 chr2 147503596 147503742 -105752841 + FLAM_C SINE Alu 1 143 0 844 253 0 0 chr2 147503782 147503968 -105752615 - AluJo SINE Alu -12 300 115 25612 141 14 25 chr2 147503968 147509165 -105747418 - L1PA8A LINE L1 -5 6441 1187 216 67 0 0 chr2 147509165 147509195 -105747388 + (TTG)n Simple_repeat Simple_repeat 1 30 0 25612 141 14 25 chr2 147509195 147510393 -105746190 - L1PA8A LINE L1 -5259 1187 57 234 0 0 0 chr2 147510393 147510419 -105746164 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 25612 141 14 25 chr2 147510419 147510475 -105746108 - L1PA8A LINE L1 -6389 57 2 676 195 8 8 chr2 147510482 147510605 -105745978 - AluJo SINE Alu -189 123 1 2021 116 0 47 chr2 147511488 147511789 -105744794 + AluSx SINE Alu 1 287 -25 182 219 21 125 chr2 147512093 147512189 -105744394 - L3b LINE CR1 -199 1384 1299 896 169 0 30 chr2 147513674 147513840 -105742743 - FRAM SINE Alu -2 164 4 215 256 0 0 chr2 147513894 147513937 -105742646 - MIR SINE MIR -114 148 106 22 56 0 0 chr2 147514102 147514138 -105742445 + AT_rich Low_complexity Low_complexity 1 36 0 242 257 285 17 chr2 147514492 147514671 -105741912 + MIR SINE MIR 32 258 -4 211 185 19 19 chr2 147515607 147515661 -105740922 + (TTA)n Simple_repeat Simple_repeat 1 54 0 33 25 0 0 chr2 147516833 147516873 -105739710 + AT_rich Low_complexity Low_complexity 1 40 0 2102 163 44 31 chr2 147517619 147518164 -105738419 - MLT2A2 LTR ERVL 0 554 1 719 200 21 1 chr2 147518411 147518551 -105738032 - LTR12 LTR ERV1 -234 480 175 310 221 0 0 chr2 147518551 147518619 -105737964 - LTR30 LTR ERV1 -102 620 553 368 105 79 13 chr2 147518620 147518696 -105737887 - LTR12 LTR ERV1 -429 285 205 1210 116 49 107 chr2 147518734 147519013 -105737570 - LTR12 LTR ERV1 -455 1983 1 214 369 39 0 chr2 147519566 147519669 -105736914 + L2 LINE L2 2240 2346 -968 633 261 0 25 chr2 147519791 147519952 -105736631 + L2 LINE L2 2565 2721 -593 491 159 46 24 chr2 147519953 147520075 -105736508 + MER61E LTR ERV1 1 107 -318 478 246 122 42 chr2 147520269 147520593 -105735990 + MER61D LTR ERV1 335 490 -11 814 280 109 58 chr2 147520701 147520732 -105735851 + L2 LINE L2 2730 2758 -555 212 0 36 0 chr2 147520732 147520760 -105735823 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 814 280 109 58 chr2 147520760 147521252 -105735331 + L2 LINE L2 2758 3313 0 425 243 7 125 chr2 147521940 147522092 -105734491 - MER94 DNA DNA 0 134 1 895 237 38 15 chr2 147522847 147523113 -105733470 - HsTC2 DNA Tc2 0 1900 1629 238 218 18 0 chr2 147523105 147523160 -105733423 - HsTC2 DNA Tc2 -1813 85 30 * 758 21 21 0 chr2 147524156 147524251 -105732332 + (TTTC)n Simple_repeat Simple_repeat 3 99 0 1672 169 30 44 chr2 147525358 147525765 -105730818 + L1MB8 LINE L1 5762 6162 -16 21 0 0 0 chr2 147527831 147527852 -105728731 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 147527910 147527931 -105728652 + AT_rich Low_complexity Low_complexity 1 21 0 843 207 18 55 chr2 147528484 147528701 -105727882 - MER58C DNA MER1_type 0 215 7 401 251 137 46 chr2 147528919 147529094 -105727489 - MLT1J LTR MaLR -2 509 319 245 226 0 16 chr2 147529292 147529354 -105727229 - MLT1L LTR MaLR -536 79 19 363 306 50 0 chr2 147529447 147529568 -105727015 + MIR SINE MIR 43 169 -93 243 0 0 0 chr2 147531867 147531894 -105724689 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 992 195 0 0 chr2 147532259 147532428 -105724155 + MLT1B LTR MaLR 219 387 -3 777 242 0 6 chr2 147532877 147533042 -105723541 + AluJo SINE Alu 124 287 -25 310 280 11 0 chr2 147533663 147533756 -105722827 - MIR SINE MIR -1 261 168 401 325 139 0 chr2 147533759 147533925 -105722658 + MER91B DNA MER1_type 1 189 -1 243 230 0 95 chr2 147534197 147534271 -105722312 - L2 LINE L2 -3 3310 3244 243 61 0 0 chr2 147534509 147534542 -105722041 + (CA)n Simple_repeat Simple_repeat 1 33 0 1486 255 76 21 chr2 147534598 147535192 -105721391 - MLT1E2 LTR MaLR -8 618 1 2274 139 8 5 chr2 147535194 147535582 -105721001 - MLT1B LTR MaLR -1 389 1 2259 101 0 3 chr2 147535611 147535918 -105720665 - AluSc SINE Alu -3 306 1 608 243 179 84 chr2 147536010 147536508 -105720075 - L1MC4 LINE L1 0 8042 7498 402 39 0 0 chr2 147537145 147537197 -105719386 + (TA)n Simple_repeat Simple_repeat 2 53 0 387 0 0 0 chr2 147538443 147538486 -105718097 + (TA)n Simple_repeat Simple_repeat 2 44 0 22 70 0 0 chr2 147543254 147543297 -105713286 + AT_rich Low_complexity Low_complexity 1 43 0 30 0 0 0 chr2 147543972 147544002 -105712581 + AT_rich Low_complexity Low_complexity 1 30 0 5064 37 8 10 chr2 147545186 147545809 -105710774 + L1PA4 LINE L1 5531 6152 -3 2578 242 40 1 chr2 147546604 147547260 -105709323 - L1ME1 LINE L1 -4 6162 5482 1948 284 3 16 chr2 147547256 147547896 -105708687 + L1M4 LINE L1 3707 4338 -1808 * 25 31 0 0 chr2 147550593 147550625 -105705958 + AT_rich Low_complexity Low_complexity 1 32 0 212 308 0 0 chr2 147551224 147551276 -105705307 + L2 LINE L2 3254 3305 -8 217 222 19 19 chr2 147551478 147551532 -105705051 + L2 LINE L2 3256 3309 -4 183 80 0 0 chr2 147551810 147551835 -105704748 + (A)n Simple_repeat Simple_repeat 1 25 0 215 213 0 0 chr2 147552461 147552508 -105704075 + (CAT)n Simple_repeat Simple_repeat 3 49 0 28 0 0 0 chr2 147552679 147552707 -105703876 + AT_rich Low_complexity Low_complexity 1 28 0 723 234 46 0 chr2 147553682 147553879 -105702704 - MER63A DNA MER1_type -4 206 1 29 28 0 0 chr2 147554190 147554226 -105702357 + AT_rich Low_complexity Low_complexity 1 36 0 498 323 67 14 chr2 147554474 147554697 -105701886 + MIR SINE MIR 2 236 -26 1389 112 20 0 chr2 147554727 147554924 -105701659 + AluSq SINE Alu 101 301 -12 198 292 177 0 chr2 147555082 147555178 -105701405 - MIR3 SINE MIR -3 205 93 283 294 64 9 chr2 147555206 147555315 -105701268 + MIR SINE MIR 86 200 -62 2222 97 3 0 chr2 147556629 147556927 -105699656 + AluSx SINE Alu 1 299 -13 192 261 101 77 chr2 147557624 147557718 -105698865 - MIR SINE MIR -89 119 19 2376 75 3 13 chr2 147558199 147558507 -105698076 + AluY SINE Alu 1 305 -6 1368 209 68 3 chr2 147558810 147559178 -105697405 - LTR37A LTR ERV1 0 426 35 2003 186 70 8 chr2 147559759 147560157 -105696426 + MSTB LTR MaLR 4 426 0 198 0 0 0 chr2 147560587 147560609 -105695974 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 23 68 0 0 chr2 147561024 147561068 -105695515 + AT_rich Low_complexity Low_complexity 1 44 0 810 209 22 16 chr2 147561732 147561914 -105694669 - MER5A DNA MER1_type 0 189 7 1542 203 10 68 chr2 147562039 147562238 -105694345 - MLT1A1 LTR MaLR -2 363 195 1904 117 44 0 chr2 147562238 147562536 -105694047 + AluSq SINE Alu 1 311 -2 1542 203 10 68 chr2 147562536 147562721 -105693862 - MLT1A1 LTR MaLR -170 195 1 358 333 8 8 chr2 147564390 147564516 -105692067 + MIR3 SINE MIR 67 192 -16 448 264 15 81 chr2 147565188 147565385 -105691198 + MIR SINE MIR 8 191 -71 231 157 0 0 chr2 147565386 147565437 -105691146 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 537 248 135 8 chr2 147568400 147568533 -105688050 - MER5A DNA MER1_type -7 182 33 207 0 0 0 chr2 147569228 147569251 -105687332 + (TTTG)n Simple_repeat Simple_repeat 4 26 0 21 0 0 0 chr2 147569398 147569419 -105687164 + AT_rich Low_complexity Low_complexity 1 21 0 1234 202 61 76 chr2 147569614 147569863 -105686720 - MLT1B LTR MaLR 0 390 148 2313 62 3 10 chr2 147569863 147570155 -105686428 + AluY SINE Alu 2 291 -20 1234 202 61 76 chr2 147570155 147570301 -105686282 - MLT1B LTR MaLR -242 148 1 325 271 43 21 chr2 147570314 147570454 -105686129 - L1ME4a LINE L1 -2 6119 5977 27 0 0 0 chr2 147570944 147570971 -105685612 + AT_rich Low_complexity Low_complexity 1 27 0 23 54 0 0 chr2 147571778 147571815 -105684768 + AT_rich Low_complexity Low_complexity 1 37 0 22 56 0 0 chr2 147572230 147572266 -105684317 + AT_rich Low_complexity Low_complexity 1 36 0 1345 266 27 9 chr2 147572383 147572718 -105683865 + MER119 DNA MER1_type 1 341 -242 27 29 0 0 chr2 147572718 147572752 -105683831 + AT_rich Low_complexity Low_complexity 1 34 0 557 219 87 36 chr2 147572840 147573059 -105683524 + MER119 DNA MER1_type 354 583 0 22 35 0 0 chr2 147573849 147573878 -105682705 + AT_rich Low_complexity Low_complexity 1 29 0 244 347 66 21 chr2 147574045 147574287 -105682296 - L1ME4a LINE L1 -296 5825 5573 1353 84 11 0 chr2 147574297 147574476 -105682107 - AluSx SINE Alu -112 200 20 258 359 19 19 chr2 147575623 147575726 -105680857 + L2 LINE L2 3189 3291 -22 1491 180 77 11 chr2 147576507 147576779 -105679804 + AluJo SINE Alu 1 290 -22 353 296 169 14 chr2 147576890 147577032 -105679551 - MER5A DNA MER1_type -8 181 18 21 0 0 0 chr2 147577128 147577149 -105679434 + AT_rich Low_complexity Low_complexity 1 21 0 180 200 0 0 chr2 147577381 147577426 -105679157 + (TA)n Simple_repeat Simple_repeat 1 45 0 1809 155 30 0 chr2 147577426 147577722 -105678861 - MER7A DNA MER2_type 0 346 44 351 0 0 0 chr2 147577760 147577799 -105678784 + (TG)n Simple_repeat Simple_repeat 2 40 0 24 0 0 0 chr2 147578389 147578413 -105678170 + AT_rich Low_complexity Low_complexity 1 24 0 411 311 64 44 chr2 147578556 147578973 -105677610 - L1MC/D LINE L1 -347 5774 5352 259 327 136 26 chr2 147580366 147580638 -105675945 - L2 LINE L2 -1 3312 3011 311 326 43 0 chr2 147580639 147580777 -105675806 - L2 LINE L2 -555 2759 2616 208 179 0 0 chr2 147581021 147581060 -105675523 - MER5B DNA MER1_type -2 176 138 180 0 0 0 chr2 147581060 147581080 -105675503 + (TA)n Simple_repeat Simple_repeat 2 21 0 2006 102 4 7 chr2 147581103 147581378 -105675205 - AluSp SINE Alu -38 275 2 1316 146 5 23 chr2 147581382 147581602 -105674981 - AluJb SINE Alu -12 300 85 180 0 0 0 chr2 147581672 147581692 -105674891 + (CA)n Simple_repeat Simple_repeat 2 21 0 437 267 20 0 chr2 147581694 147581795 -105674788 - MER5B DNA MER1_type -75 103 1 22 35 0 0 chr2 147582989 147583018 -105673565 + AT_rich Low_complexity Low_complexity 1 29 0 24 53 0 0 chr2 147583294 147583332 -105673251 + AT_rich Low_complexity Low_complexity 1 38 0 391 253 133 24 chr2 147585991 147586157 -105670426 - MIR SINE MIR -2 260 77 318 317 62 70 chr2 147586298 147586557 -105670026 + MIR SINE MIR 6 262 0 764 169 52 0 chr2 147586719 147586855 -105669728 - FRAM SINE Alu -35 141 1 12371 163 45 9 chr2 147587591 147589712 -105666871 + L1MA3 LINE L1 1 2197 -5368 11437 165 69 38 chr2 147589709 147591790 -105664793 + L1MA3 LINE L1 3905 6143 -1581 * 2136 127 0 6 chr2 147591790 147592104 -105664479 + AluSx SINE Alu 1 312 0 11437 165 69 38 chr2 147592104 147593470 -105663113 + L1MA3 LINE L1 6143 7465 -259 1469 135 12 0 chr2 147593643 147593895 -105662688 + L1MA2 LINE L1 6050 6304 0 372 349 51 22 chr2 147593913 147594318 -105662265 - L3 LINE CR1 -832 745 259 322 360 34 14 chr2 147594683 147594882 -105661701 - MIR SINE MIR -42 220 19 267 350 40 10 chr2 147595845 147595945 -105660638 + MER91C DNA MER1_type 27 129 -11 24 53 0 0 chr2 147596124 147596162 -105660421 + AT_rich Low_complexity Low_complexity 1 38 0 182 234 21 21 chr2 147596704 147596751 -105659832 + MIR3 SINE MIR 119 165 -43 2135 137 0 0 chr2 147596966 147597272 -105659311 - AluSg SINE Alu -4 306 1 1023 239 66 42 chr2 147597692 147598073 -105658510 - MLT1B LTR MaLR 0 390 1 275 0 29 0 chr2 147599167 147599202 -105657381 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 22 0 0 0 chr2 147599667 147599689 -105656894 + AT_rich Low_complexity Low_complexity 1 22 0 26 30 0 0 chr2 147599743 147599776 -105656807 + AT_rich Low_complexity Low_complexity 1 33 0 258 125 0 0 chr2 147599845 147599893 -105656690 + (TC)n Simple_repeat Simple_repeat 2 49 0 311 358 75 0 chr2 147600271 147600391 -105656192 - L2 LINE L2 0 3272 3144 266 353 95 26 chr2 147600689 147600921 -105655662 - L2 LINE L2 -470 2844 2597 613 290 97 14 chr2 147602496 147602703 -105653880 - MIR SINE MIR -37 225 2 232 191 24 0 chr2 147606497 147606581 -105650002 + (TA)n Simple_repeat Simple_repeat 2 87 0 317 337 52 64 chr2 147606672 147606844 -105649739 - MIR3 SINE MIR -19 189 20 323 306 95 14 chr2 147606985 147607132 -105649451 + MIR SINE MIR 55 213 -49 33 66 0 0 chr2 147607966 147608027 -105648556 + AT_rich Low_complexity Low_complexity 1 61 0 304 267 91 0 chr2 147608080 147608245 -105648338 - L1ME4a LINE L1 -168 5953 5774 29 78 0 0 chr2 147608245 147608309 -105648274 + AT_rich Low_complexity Low_complexity 1 64 0 24 0 0 0 chr2 147608695 147608719 -105647864 + AT_rich Low_complexity Low_complexity 1 24 0 24 32 0 0 chr2 147608790 147608821 -105647762 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr2 147609400 147609422 -105647161 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 147610461 147610482 -105646101 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 147610568 147610590 -105645993 + AT_rich Low_complexity Low_complexity 1 22 0 34 0 0 0 chr2 147610959 147610993 -105645590 + AT_rich Low_complexity Low_complexity 1 34 0 231 226 81 0 chr2 147611096 147611158 -105645425 + L1MC/D LINE L1 5377 5443 -890 395 241 120 0 chr2 147611317 147611450 -105645133 + L1PA10 LINE L1 5681 5829 -339 567 66 0 0 chr2 147611560 147611636 -105644947 + (TCTA)n Simple_repeat Simple_repeat 2 77 0 1904 140 0 0 chr2 147611963 147612241 -105644342 - AluSx SINE Alu -31 281 4 1912 161 81 5 chr2 147614331 147614715 -105641868 - L1PA16 LINE L1 -9 6157 5745 261 431 22 7 chr2 147614840 147614977 -105641606 - MIR3 SINE MIR -67 141 3 2206 123 0 0 chr2 147618497 147618807 -105637776 - AluSq SINE Alu -3 310 1 1750 175 0 10 chr2 147618861 147619153 -105637430 - AluJb SINE Alu -22 290 2 207 200 0 0 chr2 147619847 147619892 -105636691 + A-rich Low_complexity Low_complexity 1 45 0 21 57 0 0 chr2 147620598 147620633 -105635950 + AT_rich Low_complexity Low_complexity 1 35 0 390 130 91 0 chr2 147621154 147621231 -105635352 + AluS SINE Alu 3 86 -217 261 29 0 0 chr2 147621217 147621252 -105635331 + AluY SINE Alu 262 296 -6 * 1969 120 7 32 chr2 147621362 147621671 -105634912 + AluSq SINE Alu 1 301 -12 516 296 32 38 chr2 147621682 147621868 -105634715 - MIR SINE MIR 0 262 78 383 111 0 30 chr2 147621944 147622018 -105634565 - Alu SINE Alu -4 298 235 264 30 0 0 chr2 147622364 147622397 -105634186 + (TG)n Simple_repeat Simple_repeat 2 34 0 1825 176 28 8 chr2 147624191 147624549 -105632034 + MLT1A1 LTR MaLR 1 365 0 1989 140 0 0 chr2 147624943 147625268 -105631315 - AluSg SINE Alu 0 328 4 1812 177 59 13 chr2 147625324 147625697 -105630886 - MLT1B LTR MaLR 0 390 1 24 32 0 0 chr2 147625810 147625841 -105630742 + AT_rich Low_complexity Low_complexity 1 31 0 522 62 12 37 chr2 147626102 147626183 -105630400 - L1PA10 LINE L1 0 6168 6090 225 290 16 0 chr2 147626454 147626516 -105630067 + L2 LINE L2 3251 3313 0 232 328 30 0 chr2 147626633 147626700 -105629883 + L2 LINE L2 3233 3301 -12 223 314 57 67 chr2 147627893 147627998 -105628585 - L2 LINE L2 0 3272 3169 207 235 56 83 chr2 147628540 147628721 -105627862 + MIR SINE MIR 36 262 0 272 339 64 0 chr2 147628991 147629100 -105627483 - MIR SINE MIR -79 183 68 410 268 65 0 chr2 147629196 147629319 -105627264 + MIR SINE MIR 112 242 -20 224 321 95 63 chr2 147629388 147629609 -105626974 - L2 LINE L2 -932 2382 2155 344 316 112 58 chr2 147631791 147632104 -105624479 + MER102a DNA MER1_type 1 330 0 317 252 47 28 chr2 147632652 147632759 -105623824 - MIR SINE MIR 0 262 154 198 377 0 0 chr2 147632788 147632857 -105623726 - MIR SINE MIR -163 99 31 * 310 346 97 22 chr2 147632833 147633102 -105623481 - L2 LINE L2 -155 3117 2829 1415 92 69 0 chr2 147633583 147633800 -105622783 - MER39B LTR ERV1 -418 235 4 417 237 32 0 chr2 147633988 147634081 -105622502 - L2 LINE L2 -49 3264 3169 243 259 52 35 chr2 147634479 147634595 -105621988 - Tigger8 DNA MER2_type -350 316 199 493 195 156 13 chr2 147635035 147635189 -105621394 + MER5B DNA MER1_type 3 178 0 332 325 32 43 chr2 147635381 147635569 -105621014 + MER5A DNA MER1_type 4 189 0 307 350 42 46 chr2 147635897 147636114 -105620469 + L2 LINE L2 3003 3218 -54 195 258 43 65 chr2 147637503 147637596 -105618987 - L3 LINE CR1 -309 1268 1178 24 32 0 0 chr2 147637932 147637963 -105618620 + AT_rich Low_complexity Low_complexity 1 31 0 438 343 73 0 chr2 147638737 147638915 -105617668 + MIR SINE MIR 34 224 -38 250 277 36 0 chr2 147639855 147639938 -105616645 + MIR SINE MIR 170 255 -7 251 362 11 0 chr2 147640101 147640195 -105616388 - MIR3 SINE MIR -10 198 104 204 121 30 0 chr2 147640197 147640230 -105616353 + GA-rich Low_complexity Low_complexity 4 37 0 27 81 0 0 chr2 147640839 147640901 -105615682 + AT_rich Low_complexity Low_complexity 1 62 0 716 234 13 0 chr2 147641249 147641406 -105615177 + MER45A DNA AcHobo 20 178 0 * 1752 161 50 0 chr2 147641398 147641718 -105614865 + MER7A DNA MER2_type 1 345 -1 481 347 149 27 chr2 147641819 147642559 -105614024 - L2 LINE L2 -214 3058 2231 180 0 0 0 chr2 147642854 147642874 -105613709 + (TG)n Simple_repeat Simple_repeat 2 21 0 417 20 0 0 chr2 147643898 147643948 -105612635 + (TA)n Simple_repeat Simple_repeat 1 50 0 367 252 24 49 chr2 147644991 147645114 -105611469 + MIR SINE MIR 32 151 -111 548 296 67 6 chr2 147645625 147645804 -105610779 + MIR SINE MIR 2 191 -71 538 308 8 73 chr2 147645809 147646056 -105610527 + MIR SINE MIR 32 262 0 30 59 0 0 chr2 147646318 147646369 -105610214 + AT_rich Low_complexity Low_complexity 1 51 0 22 0 0 0 chr2 147646911 147646933 -105609650 + AT_rich Low_complexity Low_complexity 1 22 0 2336 137 56 20 chr2 147647270 147647678 -105608905 - MSTC LTR MaLR -2 426 4 1397 217 109 6 chr2 147648549 147648871 -105607712 - MLT1D LTR MaLR -145 360 6 4058 212 17 143 chr2 147648876 147649723 -105606860 - MLT1D-int LTR MaLR 0 1371 813 5690 64 0 17 chr2 147649723 147650478 -105606105 - L1PA7 LINE L1 0 6154 5413 4058 212 17 143 chr2 147650478 147651200 -105605383 - MLT1D-int LTR MaLR -558 813 1 458 218 45 27 chr2 147651221 147651331 -105605252 - MLT1D LTR MaLR -114 391 280 198 341 185 15 chr2 147652515 147652650 -105603933 - MIR3 SINE MIR -35 173 16 1675 170 7 7 chr2 147653041 147653329 -105603254 - AluJo SINE Alu -24 288 1 23 0 0 0 chr2 147653489 147653512 -105603071 + AT_rich Low_complexity Low_complexity 1 23 0 229 305 26 118 chr2 147653870 147654142 -105602441 + L2 LINE L2 1564 1810 -1504 31 99 0 0 chr2 147654409 147654510 -105602073 + AT_rich Low_complexity Low_complexity 1 101 0 563 305 75 43 chr2 147654593 147654942 -105601641 - L1ME LINE L1 -366 5804 5431 1553 290 47 24 chr2 147654942 147655517 -105601066 - MLT1E LTR MaLR -3 590 3 563 305 75 43 chr2 147655517 147655698 -105600885 - L1ME LINE L1 -739 5431 5257 331 327 89 98 chr2 147655726 147656286 -105600297 + L2 LINE L2 1822 2376 -938 2147 103 7 0 chr2 147656551 147656841 -105599742 + AluSp SINE Alu 1 292 -21 349 372 60 44 chr2 147656986 147657483 -105599100 + L2 LINE L2 2805 3309 -4 325 306 9 0 chr2 147657602 147657710 -105598873 + MIR3 SINE MIR 94 202 -6 327 310 106 0 chr2 147658034 147658176 -105598407 - L2 LINE L2 -9 3304 3148 186 43 0 0 chr2 147658637 147658660 -105597923 + (TA)n Simple_repeat Simple_repeat 1 23 0 739 214 26 7 chr2 147658693 147658847 -105597736 - MIR SINE MIR -18 244 88 406 302 59 32 chr2 147658959 147659357 -105597226 + L1ME LINE L1 5022 5429 -749 300 276 112 35 chr2 147659369 147659539 -105597044 + L1ME LINE L1 5469 5651 -470 462 309 76 17 chr2 147659549 147659785 -105596798 + MIR SINE MIR 13 262 0 870 314 206 43 chr2 147660303 147660443 -105596140 + L3 LINE CR1 576 692 -885 301 164 0 0 chr2 147660443 147660498 -105596085 + L1MA2 LINE L1 6250 6304 0 870 314 206 43 chr2 147660498 147661195 -105595388 + L3 LINE CR1 692 1550 -27 376 292 21 96 chr2 147662248 147662488 -105594095 + L2 LINE L2 3092 3313 0 206 330 106 11 chr2 147662556 147662650 -105593933 - L2 LINE L2 -3 3310 3208 608 270 39 62 chr2 147662802 147663061 -105593522 + LTR16A1 LTR ERVL 203 455 -2 378 261 72 0 chr2 147664033 147664144 -105592439 - L2 LINE L2 -12 3301 3183 2189 101 0 0 chr2 147664287 147664564 -105592019 + AluSg SINE Alu 1 277 -33 1779 141 19 118 chr2 147664880 147665313 -105591270 - MLT1B LTR MaLR 0 390 1 3918 154 108 19 chr2 147665323 147666081 -105590502 - LTR1B LTR ERV1 0 826 1 349 293 71 29 chr2 147666468 147666608 -105589975 - L2 LINE L2 0 3313 3168 392 214 77 30 chr2 147666872 147667040 -105589543 - MER113 DNA MER1_type? -304 217 42 416 187 28 62 chr2 147667855 147667967 -105588616 + FLAM_A SINE Alu 35 132 -1 181 305 104 26 chr2 147668034 147668188 -105588395 + L2 LINE L2 1860 2025 -1289 6034 88 13 47 chr2 147668197 147669143 -105587440 - L1PA10 LINE L1 -1 6482 5569 21144 180 38 35 chr2 147669153 147674302 -105582281 - L1PA10 LINE L1 -1176 5285 10 194 348 75 25 chr2 147674310 147674471 -105582112 + L2 LINE L2 2018 2186 -1128 189 335 144 32 chr2 147674584 147674897 -105581686 + L2 LINE L2 2183 2530 -784 900 233 5 5 chr2 147674926 147675115 -105581468 + MER58A DNA MER1_type 36 224 0 1708 185 7 3 chr2 147675136 147675439 -105581144 + AluJo SINE Alu 1 304 -8 284 176 0 0 chr2 147675645 147675696 -105580887 - MLT1F LTR MaLR -1 541 491 250 272 46 15 chr2 147675858 147675969 -105580614 + Charlie8 DNA MER1_type 225 2417 0 232 231 106 39 chr2 147677955 147678059 -105578524 + L3 LINE CR1 1461 1571 -6 978 289 4 0 chr2 147678149 147678384 -105578199 + MIR SINE MIR 2 237 -25 220 392 0 0 chr2 147678540 147678637 -105577946 + MIR3 SINE MIR 82 178 -30 23 33 0 0 chr2 147678761 147678791 -105577792 + AT_rich Low_complexity Low_complexity 1 30 0 302 240 0 13 chr2 147679892 147679967 -105576616 + MLT1K LTR MaLR 509 582 -6 22 56 0 0 chr2 147681305 147681341 -105575242 + AT_rich Low_complexity Low_complexity 1 36 0 532 176 40 96 chr2 147682560 147682667 -105573916 + MER53 DNA DNA 2 95 -94 2004 131 0 7 chr2 147682667 147682957 -105573626 - AluSx SINE Alu -24 288 1 532 176 40 96 chr2 147682957 147683048 -105573535 + MER53 DNA DNA 95 189 0 272 314 85 42 chr2 147683748 147683984 -105572599 + L2 LINE L2 2632 2877 -437 1845 148 0 0 chr2 147684170 147684441 -105572142 - AluSx SINE Alu -41 271 1 443 272 66 149 chr2 147685643 147685944 -105570639 - L2 LINE L2 0 3272 2997 185 375 0 0 chr2 147686096 147686160 -105570423 - MIR SINE MIR -129 79 16 22 56 0 0 chr2 147686488 147686524 -105570059 + AT_rich Low_complexity Low_complexity 1 36 0 250 405 43 9 chr2 147687714 147687830 -105568753 + L2 LINE L2 3149 3268 -4 207 0 0 0 chr2 147688846 147688869 -105567714 + (A)n Simple_repeat Simple_repeat 1 23 0 272 317 124 33 chr2 147689026 147689245 -105567338 - L3b LINE CR1 -13 1564 1330 515 56 14 0 chr2 147689538 147689609 -105566974 + (TG)n Simple_repeat Simple_repeat 1 72 0 2208 130 40 11 chr2 147689828 147690182 -105566401 - THE1B LTR MaLR 0 364 1 402 21 0 0 chr2 147690282 147690329 -105566254 + (CA)n Simple_repeat Simple_repeat 1 47 0 500 304 0 68 chr2 147690346 147690553 -105566030 - MIR SINE MIR -10 252 60 208 242 60 26 chr2 147691980 147692082 -105564501 - MIR SINE MIR -61 147 96 195 256 0 0 chr2 147692251 147692290 -105564293 - MIR SINE MIR -168 94 56 243 0 0 0 chr2 147692331 147692358 -105564225 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 262 111 0 44 chr2 147693105 147693150 -105563433 - tRNA-Ile-ATT tRNA tRNA -33 44 2 1881 141 40 3 chr2 147693518 147693816 -105562767 - AluSx SINE Alu -3 309 1 557 100 0 38 chr2 147694835 147694915 -105561668 + AluSg/x SINE Alu 214 290 -22 798 109 0 0 chr2 147694915 147695034 -105561549 + (TA)n Simple_repeat Simple_repeat 2 120 0 348 175 0 0 chr2 147695277 147695334 -105561249 - MSTB LTR MaLR 0 426 370 2042 195 16 68 chr2 147695786 147696033 -105560550 - MSTB LTR MaLR 0 426 211 1459 167 56 4 chr2 147696033 147696302 -105560281 - AluJb SINE Alu -7 305 23 2042 195 16 68 chr2 147696302 147696496 -105560087 - MSTB LTR MaLR -215 211 8 597 309 110 36 chr2 147697272 147697890 -105558693 - L1ME4a LINE L1 -104 6017 5368 212 0 36 0 chr2 147699086 147699114 -105557469 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 180 0 0 0 chr2 147699175 147699195 -105557388 + (TG)n Simple_repeat Simple_repeat 2 21 0 378 343 22 39 chr2 147699687 147699865 -105556718 + MIR3 SINE MIR 23 197 -11 1021 80 43 6 chr2 147700488 147700650 -105555933 + L1MB4 LINE L1 6013 6180 0 31 26 0 0 chr2 147701571 147701609 -105554974 + AT_rich Low_complexity Low_complexity 1 38 0 1443 189 0 53 chr2 147702035 147702336 -105554247 + AluJo SINE Alu 17 301 -11 1562 193 114 26 chr2 147702391 147702847 -105553736 - LTR54B LTR ERV1 -2 496 1 2645 92 5 16 chr2 147702879 147703258 -105553325 + THE1C LTR MaLR 1 375 0 351 230 0 14 chr2 147703529 147703603 -105552980 - Tigger5 DNA MER2_type 0 2323 2251 255 218 0 18 chr2 147703572 147703627 -105552956 - Tigger5 DNA MER2_type -2269 54 1 * 1708 170 7 7 chr2 147705296 147705585 -105550998 + AluJb SINE Alu 3 291 -21 891 183 12 102 chr2 147706257 147706503 -105550080 - L1MC1 LINE L1 -6 6327 6104 1857 167 30 18 chr2 147706503 147706833 -105549750 - MER1B DNA MER1_type 0 339 6 4311 195 31 4 chr2 147706839 147708106 -105548477 - L1MC1 LINE L1 -223 6110 4815 232 340 0 32 chr2 147708422 147708516 -105548067 + MER5A DNA MER1_type 99 189 0 265 286 152 0 chr2 147708594 147708699 -105547884 - L2 LINE L2 0 3313 3193 2356 49 3 0 chr2 147709176 147709461 -105547122 + AluY SINE Alu 2 287 -24 206 32 32 0 chr2 147709464 147709495 -105547088 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 210 128 51 0 chr2 147709642 147709681 -105546902 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 223 302 132 31 chr2 147709831 147709960 -105546623 + MIR3 SINE MIR 54 195 -13 2137 118 0 10 chr2 147710195 147710508 -105546075 - AluSg SINE Alu 0 310 1 22 56 0 0 chr2 147711974 147712010 -105544573 + AT_rich Low_complexity Low_complexity 1 36 0 2024 123 3 0 chr2 147712052 147712363 -105544220 + AluSp SINE Alu 1 312 0 1379 172 95 40 chr2 147714004 147714277 -105542306 + AluJo SINE Alu 1 288 -24 329 304 61 9 chr2 147716985 147717100 -105539483 - L2 LINE L2 -16 3256 3136 2283 110 0 0 chr2 147717931 147718239 -105538344 - AluSc SINE Alu -1 308 1 33 56 0 0 chr2 147718644 147718698 -105537885 + AT_rich Low_complexity Low_complexity 1 54 0 336 280 121 6 chr2 147718784 147718941 -105537642 - L2 LINE L2 -22 3291 3117 1337 201 18 26 chr2 147718941 147719357 -105537226 - MLT1C-int LTR MaLR -838 533 2 1730 190 43 80 chr2 147719358 147719843 -105536740 - MLT1C LTR MaLR 0 467 1 2035 138 0 22 chr2 147720130 147720449 -105536134 - AluSq SINE Alu 0 313 2 23 0 0 0 chr2 147720763 147720786 -105535797 + AT_rich Low_complexity Low_complexity 1 23 0 2045 88 11 25 chr2 147721133 147721418 -105535165 + AluY SINE Alu 1 281 -30 320 177 0 32 chr2 147722015 147722077 -105534506 - tRNA-Arg-CGC tRNA tRNA -16 60 1 348 346 63 63 chr2 147723458 147723889 -105532694 - L2 LINE L2 -7 3265 2835 225 0 0 0 chr2 147723895 147723920 -105532663 + (TTA)n Simple_repeat Simple_repeat 3 27 0 1007 64 0 57 chr2 147723920 147724061 -105532522 - L1PA3 LINE L1 -18 6137 6005 761 228 71 13 chr2 147724558 147724782 -105531801 - MER63C DNA MER1_type 0 931 695 2119 248 83 16 chr2 147724971 147725613 -105530970 - MER63C DNA MER1_type -245 685 1 2239 106 3 0 chr2 147725996 147726298 -105530285 - AluSp SINE Alu -10 303 1 1577 188 10 23 chr2 147726300 147726604 -105529979 - AluJo SINE Alu -12 300 1 226 375 27 45 chr2 147727117 147727229 -105529354 + L2 LINE L2 3158 3267 -5 186 133 0 0 chr2 147727233 147727263 -105529320 + (GGAA)n Simple_repeat Simple_repeat 3 32 0 2247 162 2 28 chr2 147727380 147727775 -105528808 - MLT1B LTR MaLR -5 385 1 21 36 0 0 chr2 147727900 147727928 -105528655 + AT_rich Low_complexity Low_complexity 1 28 0 3305 192 48 13 chr2 147728203 147728874 -105527709 + MER54A LTR ERVL 203 896 -5 270 0 0 0 chr2 147729046 147729076 -105527507 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 21 36 0 0 chr2 147729103 147729131 -105527452 + AT_rich Low_complexity Low_complexity 1 28 0 505 306 107 34 chr2 147730119 147730504 -105526079 - MLT1J1 LTR MaLR 0 446 34 341 58 19 0 chr2 147731875 147731927 -105524656 + (TG)n Simple_repeat Simple_repeat 2 54 0 399 267 51 57 chr2 147731958 147732134 -105524449 - L2 LINE L2 -125 3188 3014 363 23 0 0 chr2 147732568 147732612 -105523971 + (TG)n Simple_repeat Simple_repeat 2 45 0 216 0 0 0 chr2 147733215 147733239 -105523344 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 184 330 68 23 chr2 147733859 147733947 -105522636 - L3 LINE CR1 -157 1420 1329 25 31 0 0 chr2 147734868 147734900 -105521683 + AT_rich Low_complexity Low_complexity 1 32 0 722 258 36 0 chr2 147734900 147735094 -105521489 - MER58C DNA MER1_type -1 214 14 407 285 46 0 chr2 147735155 147735285 -105521298 - LTR27 LTR ERV1 -1 635 500 2377 217 11 13 chr2 147735324 147735854 -105520729 - LTR27 LTR ERV1 -138 498 3 27 0 0 0 chr2 147736025 147736052 -105520531 + AT_rich Low_complexity Low_complexity 1 27 0 1265 178 163 0 chr2 147738357 147738615 -105517968 + AluSx SINE Alu 1 300 -2 399 41 0 0 chr2 147738615 147738664 -105517919 + (GGAA)n Simple_repeat Simple_repeat 1 49 0 369 0 0 0 chr2 147739015 147739056 -105517527 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 515 276 49 43 chr2 147739886 147740049 -105516534 - MER5B DNA MER1_type 0 178 15 22 0 0 0 chr2 147740757 147740779 -105515804 + AT_rich Low_complexity Low_complexity 1 22 0 28 48 0 0 chr2 147741213 147741255 -105515328 + AT_rich Low_complexity Low_complexity 1 42 0 261 0 0 0 chr2 147742250 147742279 -105514304 + (TG)n Simple_repeat Simple_repeat 2 30 0 386 231 53 95 chr2 147744001 147744170 -105512413 + MER112 DNA MER1_type 1 162 -98 2089 176 43 17 chr2 147745019 147745527 -105511056 - LTR27 LTR ERV1 -11 493 2 2772 7 0 0 chr2 147745633 147745935 -105510648 - AluYb8 SINE Alu -16 302 1 1810 184 37 8 chr2 147746802 147747156 -105509427 + MLT1A1 LTR MaLR 2 365 0 291 28 0 0 chr2 147747754 147747790 -105508793 + (CA)n Simple_repeat Simple_repeat 2 37 0 208 135 0 0 chr2 147747995 147748032 -105508551 + (A)n Simple_repeat Simple_repeat 1 37 0 21 36 0 0 chr2 147749435 147749463 -105507120 + AT_rich Low_complexity Low_complexity 1 28 0 2599 42 0 3 chr2 147752403 147752712 -105503871 - AluY SINE Alu -3 308 1 966 166 151 5 chr2 147753355 147753560 -105503023 + AluJo SINE Alu 1 235 -77 423 0 0 0 chr2 147753903 147753950 -105502633 + (CA)n Simple_repeat Simple_repeat 1 47 0 2073 117 0 26 chr2 147754298 147754641 -105501942 - L1MB2 LINE L1 -1 6170 5837 206 219 0 0 chr2 147754716 147754757 -105501826 + (TG)n Simple_repeat Simple_repeat 2 42 0 22 56 0 0 chr2 147754798 147754834 -105501749 + AT_rich Low_complexity Low_complexity 1 36 0 1372 161 16 21 chr2 147755107 147755349 -105501234 - AluJb SINE Alu -9 303 63 1522 144 0 0 chr2 147755397 147755633 -105500950 + AluSc SINE Alu 63 298 -11 34 65 0 0 chr2 147755712 147755774 -105500809 + AT_rich Low_complexity Low_complexity 1 62 0 2433 68 0 3 chr2 147756237 147756545 -105500038 + AluY SINE Alu 1 307 -4 23 0 0 0 chr2 147757202 147757225 -105499358 + AT_rich Low_complexity Low_complexity 1 23 0 2027 73 91 4 chr2 147759373 147759648 -105496935 + AluY SINE Alu 1 299 -12 1982 141 33 0 chr2 147761253 147761587 -105494996 - L1PA16 LINE L1 -9 6157 5813 258 373 110 33 chr2 147761692 147762354 -105494229 + L2 LINE L2 1933 2645 -669 236 291 85 78 chr2 147763043 147763325 -105493258 + L2 LINE L2 3026 3309 -4 27 0 0 0 chr2 147763376 147763403 -105493180 + AT_rich Low_complexity Low_complexity 1 27 0 203 397 0 0 chr2 147765297 147765375 -105491208 + MIR3 SINE MIR 88 165 -43 21 36 0 0 chr2 147765433 147765461 -105491122 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 147766119 147766147 -105490436 + AT_rich Low_complexity Low_complexity 1 28 0 470 333 22 11 chr2 147767650 147767830 -105488753 - MLT1J LTR MaLR -236 275 94 22 0 0 0 chr2 147768201 147768223 -105488360 + AT_rich Low_complexity Low_complexity 1 22 0 349 213 53 0 chr2 147768397 147768472 -105488111 + MIR SINE MIR 73 151 -111 261 0 0 0 chr2 147769316 147769345 -105487238 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 220 246 0 18 chr2 147769753 147769810 -105486773 - L2 LINE L2 0 3272 3217 307 122 0 20 chr2 147769848 147769897 -105486686 + MIR SINE MIR 210 257 -5 21 36 0 0 chr2 147769898 147769926 -105486657 + AT_rich Low_complexity Low_complexity 1 28 0 709 230 30 12 chr2 147770326 147770491 -105486092 - MER5A DNA MER1_type -21 168 1 227 233 23 0 chr2 147770841 147771017 -105485566 + (TA)n Simple_repeat Simple_repeat 1 180 0 244 194 35 0 chr2 147771107 147771251 -105485332 + (TA)n Simple_repeat Simple_repeat 2 150 0 260 181 41 0 chr2 147771276 147771447 -105485136 + (TA)n Simple_repeat Simple_repeat 2 179 0 474 107 65 6 chr2 147771479 147771648 -105484935 + (TA)n Simple_repeat Simple_repeat 1 179 0 301 326 62 28 chr2 147772286 147772430 -105484153 - L3 LINE CR1 -341 1236 1088 266 323 53 30 chr2 147772658 147772791 -105483792 + L3 LINE CR1 1415 1550 -27 21 0 0 0 chr2 147774218 147774239 -105482344 + AT_rich Low_complexity Low_complexity 1 21 0 2136 121 0 0 chr2 147775269 147775566 -105481017 - AluSg SINE Alu -13 297 1 582 321 81 0 chr2 147775945 147776166 -105480417 - MIR SINE MIR -19 243 5 485 311 104 10 chr2 147777006 147777199 -105479384 - MIR SINE MIR -6 256 46 326 376 128 34 chr2 147777590 147778559 -105478024 - L2 LINE L2 -338 2976 1917 201 341 32 63 chr2 147778592 147778718 -105477865 + L2 LINE L2 3192 3313 0 419 260 79 34 chr2 147778876 147779053 -105477530 + MIR SINE MIR 9 193 -69 1809 223 23 74 chr2 147779257 147779599 -105476984 - MLT1D LTR MaLR 0 505 198 616 203 8 0 chr2 147779599 147779717 -105476866 - FLAM_C SINE Alu -13 120 2 1809 223 23 74 chr2 147779717 147779904 -105476679 - MLT1D LTR MaLR -307 198 3 532 246 35 7 chr2 147780154 147780296 -105476287 + MIR SINE MIR 68 213 -49 1793 177 0 0 chr2 147780327 147780626 -105475957 + AluJb SINE Alu 13 311 -1 574 186 0 18 chr2 147780708 147780984 -105475599 + FLAM_C SINE Alu 9 282 0 975 214 0 0 chr2 147781529 147781716 -105474867 - AluJo SINE Alu -3 309 123 1691 160 10 42 chr2 147781742 147782054 -105474529 - AluJb SINE Alu -10 302 1 397 271 16 16 chr2 147782246 147782375 -105474208 - L1MC4a LINE L1 -1879 5929 5801 379 311 44 17 chr2 147782940 147783120 -105473463 - MIR SINE MIR -7 255 71 22 56 0 0 chr2 147783528 147783564 -105473019 + AT_rich Low_complexity Low_complexity 1 36 0 184 362 134 0 chr2 147783977 147784104 -105472479 + L2 LINE L2 3125 3268 -4 234 282 29 58 chr2 147785069 147785172 -105471411 + MIR3 SINE MIR 78 163 -45 920 267 94 7 chr2 147785368 147785656 -105470927 + MER58B DNA MER1_type 29 341 0 1901 155 3 10 chr2 147786317 147786620 -105469963 + AluSx SINE Alu 1 301 -11 293 287 0 0 chr2 147787632 147787702 -105468881 - MIR SINE MIR -66 142 79 216 163 0 0 chr2 147791230 147791273 -105465310 + CT-rich Low_complexity Low_complexity 1 43 0 2216 114 0 0 chr2 147792297 147792596 -105463987 - AluSx SINE Alu -13 299 1 719 333 103 30 chr2 147794246 147794834 -105461749 + L2 LINE L2 2684 3313 0 188 182 0 18 chr2 147798150 147798205 -105458378 + A-rich Low_complexity Low_complexity 2 55 0 458 301 125 0 chr2 147799160 147799336 -105457247 + MIR SINE MIR 1 198 -64 654 171 47 67 chr2 147799339 147799532 -105457051 + MER53 DNA DNA 1 189 0 294 169 0 0 chr2 147800477 147800542 -105456041 + CT-rich Low_complexity Low_complexity 1 65 0 1321 113 50 18 chr2 147800624 147800846 -105455737 + MER30 DNA MER1_type 2 230 0 21 0 0 0 chr2 147801015 147801036 -105455547 + AT_rich Low_complexity Low_complexity 1 21 0 246 242 141 10 chr2 147801080 147801179 -105455404 - L2 LINE L2 -20 3293 3182 199 319 29 0 chr2 147801368 147801437 -105455146 + L2 LINE L2 3235 3305 -8 296 337 126 29 chr2 147801821 147801996 -105454587 - MIR SINE MIR -62 200 9 825 196 50 11 chr2 147803051 147803230 -105453353 - MER5A DNA MER1_type -3 186 1 347 194 0 0 chr2 147803275 147803337 -105453246 - MLT1K LTR MaLR -26 562 501 25 75 0 0 chr2 147803519 147803572 -105453011 + AT_rich Low_complexity Low_complexity 1 53 0 292 149 15 15 chr2 147803864 147803931 -105452652 + GA-rich Low_complexity Low_complexity 2 68 0 378 0 0 0 chr2 147805896 147805938 -105450645 + (TA)n Simple_repeat Simple_repeat 2 43 0 2346 83 0 3 chr2 147806330 147806632 -105449951 - AluSq SINE Alu -12 301 1 29 0 0 0 chr2 147806916 147806945 -105449638 + AT_rich Low_complexity Low_complexity 1 29 0 296 338 60 15 chr2 147807230 147807363 -105449220 + L2 LINE L2 3134 3272 0 21 0 0 0 chr2 147807661 147807682 -105448901 + AT_rich Low_complexity Low_complexity 1 21 0 216 67 0 0 chr2 147808009 147808039 -105448544 + (TG)n Simple_repeat Simple_repeat 2 31 0 21 0 0 0 chr2 147808234 147808255 -105448328 + AT_rich Low_complexity Low_complexity 1 21 0 252 0 0 0 chr2 147808266 147808294 -105448289 + (T)n Simple_repeat Simple_repeat 1 28 0 1918 148 16 0 chr2 147808302 147808606 -105447977 + AluSq SINE Alu 1 309 -4 355 172 0 0 chr2 147808658 147808722 -105447861 - FRAM SINE Alu -34 132 69 1456 109 57 0 chr2 147809067 147809351 -105447232 + AluSg SINE Alu 18 315 0 2394 119 26 35 chr2 147809534 147809963 -105446620 + L1MA5A LINE L1 5861 6285 -12 1679 216 135 2 chr2 147810911 147811355 -105445228 + MLT1D LTR MaLR 3 505 0 366 23 0 0 chr2 147812168 147812211 -105444372 + (CA)n Simple_repeat Simple_repeat 2 44 0 225 0 0 0 chr2 147812210 147812235 -105444348 + (GA)n Simple_repeat Simple_repeat 2 26 0 * 25 31 0 0 chr2 147812756 147812788 -105443795 + AT_rich Low_complexity Low_complexity 1 32 0 297 327 54 43 chr2 147813219 147813497 -105443086 + MLT1L LTR MaLR 197 477 -138 1553 181 11 18 chr2 147813763 147814045 -105442538 - AluJo SINE Alu -26 286 7 348 304 188 14 chr2 147814239 147814446 -105442137 - MIR SINE MIR -4 258 16 1900 40 48 24 chr2 147814477 147814729 -105441854 - AluY SINE Alu -52 259 2 1804 155 52 17 chr2 147814887 147815249 -105441334 + THE1C LTR MaLR 1 375 0 21 0 0 0 chr2 147816284 147816305 -105440278 + AT_rich Low_complexity Low_complexity 1 21 0 2476 59 0 0 chr2 147816432 147816736 -105439847 - AluY SINE Alu -7 304 1 268 211 13 13 chr2 147817874 147817985 -105438598 + (TA)n Simple_repeat Simple_repeat 1 111 0 25 31 0 0 chr2 147818423 147818455 -105438128 + AT_rich Low_complexity Low_complexity 1 32 0 261 167 19 19 chr2 147818738 147818792 -105437791 + MLT1K LTR MaLR 191 244 -344 22 35 0 0 chr2 147819179 147819208 -105437375 + AT_rich Low_complexity Low_complexity 1 29 0 21 89 0 0 chr2 147820568 147820624 -105435959 + AT_rich Low_complexity Low_complexity 1 56 0 21 36 0 0 chr2 147820787 147820815 -105435768 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 147821293 147821314 -105435269 + AT_rich Low_complexity Low_complexity 1 21 0 188 271 71 14 chr2 147821573 147821643 -105434940 + L2 LINE L2 3172 3245 -68 211 310 97 32 chr2 147821738 147821893 -105434690 + MIR SINE MIR 95 259 -3 342 0 0 0 chr2 147822405 147822443 -105434140 + (CA)n Simple_repeat Simple_repeat 1 38 0 31 0 0 0 chr2 147823242 147823273 -105433310 + AT_rich Low_complexity Low_complexity 1 31 0 284 229 10 31 chr2 147825878 147825974 -105430609 + (CATATA)n Simple_repeat Simple_repeat 3 96 0 22 0 0 0 chr2 147826321 147826343 -105430240 + AT_rich Low_complexity Low_complexity 1 22 0 229 357 31 47 chr2 147827688 147827817 -105428766 + L2 LINE L2 3146 3272 0 285 367 65 24 chr2 147828159 147828328 -105428255 - L2 LINE L2 0 3272 3097 21 0 0 0 chr2 147830034 147830055 -105426528 + AT_rich Low_complexity Low_complexity 1 21 0 2314 69 20 0 chr2 147830330 147830633 -105425950 - AluY SINE Alu -1 310 2 223 267 178 39 chr2 147830664 147830844 -105425739 - L2 LINE L2 -21 3292 3088 408 309 60 0 chr2 147832508 147832676 -105423907 + MIR SINE MIR 85 262 0 21 36 0 0 chr2 147833079 147833107 -105423476 + AT_rich Low_complexity Low_complexity 1 28 0 221 296 56 0 chr2 147834283 147834354 -105422229 + L2 LINE L2 2994 3068 -204 29 28 0 0 chr2 147835088 147835124 -105421459 + AT_rich Low_complexity Low_complexity 1 36 0 462 350 32 36 chr2 147835859 147836136 -105420447 + L1MEd LINE L1 833 1108 -5011 421 325 153 36 chr2 147836121 147836789 -105419794 + L1M4 LINE L1 3111 3856 -2290 * 727 261 122 60 chr2 147836959 147837591 -105418992 + L1M4 LINE L1 4041 4711 -1435 23 54 0 0 chr2 147838028 147838065 -105418518 + AT_rich Low_complexity Low_complexity 1 37 0 249 234 32 43 chr2 147838386 147838480 -105418103 + MER94 DNA DNA 42 134 0 253 247 0 71 chr2 147838526 147838611 -105417972 + L1M1 LINE L1 5731 5809 -491 231 318 82 9 chr2 147838923 147839033 -105417550 + L2 LINE L2 3195 3312 -1 278 328 17 8 chr2 147839247 147839366 -105417217 - L1M4 LINE L1 -1841 4305 4186 265 127 79 32 chr2 147840623 147840686 -105415897 + L1MC4 LINE L1 6652 6717 -1325 306 0 0 0 chr2 147840699 147840733 -105415850 + (TG)n Simple_repeat Simple_repeat 1 34 0 205 114 0 57 chr2 147846398 147846433 -105410150 - MIR3 SINE MIR -25 183 151 331 322 47 47 chr2 147846475 147846686 -105409897 - L3b LINE CR1 -246 1337 1127 1717 169 26 13 chr2 147847411 147847713 -105408870 - AluJb SINE Alu -6 306 1 191 401 102 7 chr2 147848395 147848532 -105408051 + L2 LINE L2 3123 3272 0 255 331 158 0 chr2 147848802 147848935 -105407648 - MIR SINE MIR -36 226 73 181 234 43 0 chr2 147849118 147849165 -105407418 - L3b LINE CR1 -218 1365 1317 1059 143 36 0 chr2 147849662 147849858 -105406725 + L1MA6 LINE L1 6084 6286 -14 189 74 0 0 chr2 147850745 147850772 -105405811 + (TAAAAA)n Simple_repeat Simple_repeat 1 27 0 24 32 0 0 chr2 147851139 147851170 -105405413 + AT_rich Low_complexity Low_complexity 1 31 0 2141 135 0 0 chr2 147851725 147852036 -105404547 + AluSx SINE Alu 1 311 -1 1721 140 4 15 chr2 147852518 147852783 -105403800 - AluSg SINE Alu -47 263 2 495 304 139 8 chr2 147853293 147853559 -105403024 - L2 LINE L2 -1 3312 3012 2210 78 0 11 chr2 147854678 147854991 -105401592 + AluSc SINE Alu 2 311 0 2798 7 0 0 chr2 147855388 147855697 -105400886 + AluYa5 SINE Alu 1 309 -2 333 291 80 35 chr2 147855772 147855951 -105400632 - MIR SINE MIR -40 222 37 232 295 6 18 chr2 147856791 147856957 -105399626 + GA-rich Low_complexity Low_complexity 3 166 0 801 203 94 5 chr2 147859215 147859407 -105397176 + MER3 DNA MER1_type 1 209 0 24 0 0 0 chr2 147859515 147859539 -105397044 + AT_rich Low_complexity Low_complexity 1 24 0 303 390 37 18 chr2 147859659 147859877 -105396706 + MIR SINE MIR 28 249 -13 224 344 39 16 chr2 147860027 147860155 -105396428 + L2 LINE L2 3177 3307 -6 184 233 0 0 chr2 147861685 147861728 -105394855 + L2 LINE L2 3223 3265 -7 352 275 54 92 chr2 147862518 147863059 -105393524 + HAL1b LINE L1 98 617 -731 978 194 0 22 chr2 147863247 147863427 -105393156 + AluJo SINE Alu 1 176 -136 751 341 61 12 chr2 147863454 147863865 -105392718 + L1MC4a LINE L1 6417 6847 -961 295 304 35 0 chr2 147863917 147864032 -105392551 - L1ME3A LINE L1 -8 6162 6044 288 0 0 0 chr2 147864158 147864190 -105392393 + (T)n Simple_repeat Simple_repeat 1 32 0 21 0 0 0 chr2 147864816 147864837 -105391746 + AT_rich Low_complexity Low_complexity 1 21 0 276 175 44 44 chr2 147865129 147865266 -105391317 + (TA)n Simple_repeat Simple_repeat 1 137 0 583 167 20 0 chr2 147865266 147865368 -105391215 - AluJb SINE Alu -195 117 14 195 129 0 0 chr2 147865882 147865913 -105390670 + (TATATG)n Simple_repeat Simple_repeat 5 35 0 29 28 0 0 chr2 147867114 147867150 -105389433 + AT_rich Low_complexity Low_complexity 1 36 0 499 330 98 28 chr2 147867419 147867777 -105388806 + MLT1J2 LTR MaLR 65 447 -3 21 57 0 0 chr2 147869153 147869188 -105387395 + AT_rich Low_complexity Low_complexity 1 35 0 22 56 0 0 chr2 147869279 147869315 -105387268 + AT_rich Low_complexity Low_complexity 1 36 0 249 319 155 13 chr2 147870042 147870268 -105386315 + L2 LINE L2 1308 1565 -1749 205 358 37 0 chr2 147870287 147870368 -105386215 + L2 LINE L2 3208 3291 -22 510 143 0 0 chr2 147870371 147870448 -105386135 + MADE1 DNA Mariner 4 80 0 310 310 50 35 chr2 147870568 147870829 -105385754 + L1ME LINE L1 5366 5630 -491 281 276 77 50 chr2 147871494 147871675 -105384908 + HAL1 LINE L1 2317 2502 -5 25 0 0 0 chr2 147871709 147871734 -105384849 + AT_rich Low_complexity Low_complexity 1 25 0 586 236 8 0 chr2 147872003 147872130 -105384453 - FLAM_C SINE Alu -5 128 1 630 314 126 0 chr2 147872306 147872513 -105384070 - MER45C DNA AcHobo -720 233 1 633 226 0 0 chr2 147872806 147872930 -105383653 - FRAM SINE Alu -37 139 16 1022 202 5 20 chr2 147873605 147873808 -105382775 + AluJo SINE Alu 95 294 -18 180 0 0 0 chr2 147873917 147873937 -105382646 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1745 172 7 7 chr2 147874166 147874468 -105382115 + AluJo SINE Alu 1 302 -10 243 0 0 0 chr2 147875552 147875579 -105381004 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 201 74 0 0 chr2 147877026 147877053 -105379530 + (T)n Simple_repeat Simple_repeat 1 27 0 1998 144 0 0 chr2 147877057 147877369 -105379214 - AluSx SINE Alu 0 312 1 1995 111 36 4 chr2 147880211 147880490 -105376093 + AluSx SINE Alu 3 290 -22 23 0 0 0 chr2 147881834 147881857 -105374726 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 147882059 147882082 -105374501 + AT_rich Low_complexity Low_complexity 1 23 0 197 301 96 14 chr2 147882459 147882532 -105374051 + L2 LINE L2 3156 3234 -38 226 303 22 11 chr2 147883093 147883182 -105373401 + L2 LINE L2 3145 3234 -38 227 125 0 21 chr2 147883182 147883230 -105373353 + LTR66 LTR ERVL 393 439 -171 259 82 0 41 chr2 147883235 147883284 -105373299 + (TA)n Simple_repeat Simple_repeat 1 47 0 28 48 0 0 chr2 147885112 147885154 -105371429 + AT_rich Low_complexity Low_complexity 1 42 0 318 298 103 15 chr2 147885489 147885668 -105370915 - MIR SINE MIR -56 206 8 23 54 0 0 chr2 147885856 147885893 -105370690 + AT_rich Low_complexity Low_complexity 1 37 0 28 29 0 0 chr2 147885997 147886032 -105370551 + AT_rich Low_complexity Low_complexity 1 35 0 1987 135 0 0 chr2 147886085 147886367 -105370216 - AluSq SINE Alu -23 290 9 237 269 0 0 chr2 147886769 147886847 -105369736 + T-rich Low_complexity Low_complexity 2 79 0 286 145 14 14 chr2 147887200 147887269 -105369314 + CT-rich Low_complexity Low_complexity 4 72 0 2241 123 7 0 chr2 147887642 147887951 -105368632 + AluSp SINE Alu 2 312 -1 224 197 15 45 chr2 147890104 147890170 -105366413 + A-rich Low_complexity Low_complexity 2 65 0 31 68 0 0 chr2 147893574 147893633 -105362950 + AT_rich Low_complexity Low_complexity 1 59 0 384 181 0 24 chr2 147893682 147893765 -105362818 + LTR33 LTR ERVL 434 514 -7 270 293 134 0 chr2 147894839 147894996 -105361587 - MER97a DNA MER1_type? -6 888 785 27 29 0 0 chr2 147895043 147895077 -105361506 + AT_rich Low_complexity Low_complexity 1 34 0 1957 236 80 23 chr2 147895365 147895937 -105360646 - MER97c DNA MER1_type? -485 605 1 198 301 64 64 chr2 147896088 147896261 -105360322 - MIR SINE MIR -75 187 15 1281 336 154 35 chr2 147896517 147898527 -105358056 - L2 LINE L2 -19 3294 986 360 0 0 0 chr2 147898639 147898679 -105357904 + (TG)n Simple_repeat Simple_repeat 1 40 0 336 24 0 0 chr2 147898866 147898907 -105357676 + (TG)n Simple_repeat Simple_repeat 2 42 0 207 69 0 0 chr2 147899122 147899151 -105357432 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 221 235 0 0 chr2 147899594 147899645 -105356938 + (TG)n Simple_repeat Simple_repeat 2 52 0 594 226 51 22 chr2 147900556 147900693 -105355890 - MER58B DNA MER1_type -9 332 192 362 335 42 33 chr2 147901238 147901450 -105355133 - L2 LINE L2 -33 3280 3067 341 349 30 6 chr2 147901520 147901689 -105354894 - L1ME LINE L1 -432 5689 5517 240 324 74 0 chr2 147901751 147901852 -105354731 - MIR SINE MIR -64 144 68 297 0 0 0 chr2 147902400 147902433 -105354150 + (T)n Simple_repeat Simple_repeat 1 33 0 611 62 0 0 chr2 147902951 147903032 -105353551 + Alu SINE Alu 221 301 -11 1628 197 55 60 chr2 147904262 147904811 -105351772 + LTR55 LTR ERV 1 546 -2 288 353 88 20 chr2 147904892 147905096 -105351487 - L3 LINE CR1 -285 1292 1075 796 202 29 58 chr2 147905428 147905477 -105351106 + L1MB3 LINE L1 5980 6029 -154 2478 156 121 4 chr2 147905477 147905957 -105350626 + MER34 LTR ERV1 4 539 -3 796 202 29 58 chr2 147905957 147906115 -105350468 + L1MB3 LINE L1 6029 6181 -2 2226 107 0 0 chr2 147906627 147906918 -105349665 - AluY SINE Alu -20 291 1 2330 246 18 50 chr2 147907322 147908308 -105348275 + L1PA16 LINE L1 4087 4985 -1161 5115 135 20 13 chr2 147908391 147909316 -105347267 + L1PA16 LINE L1 4965 5911 -255 2046 74 0 60 chr2 147909316 147909654 -105346929 - AluY SINE Alu 0 320 1 5115 135 20 13 chr2 147909654 147909903 -105346680 + L1PA16 LINE L1 5911 6157 -9 285 241 25 13 chr2 147910853 147910932 -105345651 + L1MC/D LINE L1 5694 5773 -2035 25 31 0 0 chr2 147911190 147911222 -105345361 + AT_rich Low_complexity Low_complexity 1 32 0 209 193 0 18 chr2 147912129 147912186 -105344397 + (TA)n Simple_repeat Simple_repeat 1 56 0 21 0 0 0 chr2 147912532 147912553 -105344030 + AT_rich Low_complexity Low_complexity 1 21 0 201 189 27 0 chr2 147915749 147915786 -105340797 + MIR SINE MIR 115 152 -110 1842 182 3 7 chr2 147915791 147916098 -105340485 + AluJb SINE Alu 1 306 -6 21 0 0 0 chr2 147916263 147916284 -105340299 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr2 147916377 147916397 -105340186 + (TA)n Simple_repeat Simple_repeat 1 20 0 369 0 0 0 chr2 147916420 147916461 -105340122 + (TG)n Simple_repeat Simple_repeat 2 42 0 255 125 0 0 chr2 147916461 147916501 -105340082 + (GA)n Simple_repeat Simple_repeat 2 41 0 305 160 66 9 chr2 147916951 147917057 -105339526 + LTR1B LTR ERV1 1 112 -714 3526 154 98 21 chr2 147917389 147918155 -105338428 + LTR1B LTR ERV1 1 825 -1 315 307 187 0 chr2 147919202 147919352 -105337231 + MIR SINE MIR 8 185 -77 191 345 0 0 chr2 147920484 147920539 -105336044 + L2 LINE L2 3252 3306 -7 24 0 0 0 chr2 147920776 147920800 -105335783 + AT_rich Low_complexity Low_complexity 1 24 0 356 235 12 0 chr2 147921011 147921092 -105335491 + LTR67 LTR ERVL 476 557 0 297 109 0 0 chr2 147921300 147921346 -105335237 + (A)n Simple_repeat Simple_repeat 1 46 0 238 328 98 16 chr2 147923174 147923296 -105333287 - L2 LINE L2 -1 3271 3140 237 33 0 0 chr2 147923305 147923335 -105333248 + (A)n Simple_repeat Simple_repeat 1 30 0 182 316 0 13 chr2 147924337 147924413 -105332170 + L2 LINE L2 2887 2961 -311 24 106 0 0 chr2 147926427 147926521 -105330062 + AT_rich Low_complexity Low_complexity 1 94 0 313 341 92 51 chr2 147926701 147926994 -105329589 + L1MEd LINE L1 115 419 -5700 401 268 101 54 chr2 147927228 147927942 -105328641 + L1MEd LINE L1 639 1398 -4865 2536 101 25 5 chr2 147927946 147928314 -105328269 + THE1C LTR MaLR 1 375 0 377 298 26 0 chr2 147928322 147928436 -105328147 + MER94 DNA DNA 1 117 -17 403 351 72 16 chr2 147928980 147929231 -105327352 + L1MEd LINE L1 2103 2367 -3762 528 157 34 0 chr2 147929233 147929322 -105327261 + FLAM_A SINE Alu 31 122 -20 481 292 60 56 chr2 147929324 147929838 -105326745 + L1MEd LINE L1 3829 4344 -1785 805 222 62 6 chr2 147929852 147930028 -105326555 + MLT1B LTR MaLR 204 389 -1 358 160 53 27 chr2 147930029 147930104 -105326479 - L1M4 LINE L1 -556 5618 5542 2052 85 39 26 chr2 147930505 147930811 -105325772 + AluY SINE Alu 2 311 0 290 235 42 106 chr2 147930820 147931037 -105325546 + L1MEd LINE L1 4450 4652 -1477 1870 199 16 21 chr2 147931080 147931516 -105325067 - L1MA9 LINE L1 -986 5143 4710 4525 162 47 65 chr2 147931516 147932652 -105323931 + L1MA9 LINE L1 5140 6255 -40 1512 235 48 0 chr2 147932856 147933269 -105323314 - MER63B DNA MER1_type -3 433 1 227 256 56 56 chr2 147933269 147933394 -105323189 + L1 LINE L1 4877 5001 -1128 22 35 0 0 chr2 147933695 147933724 -105322859 + AT_rich Low_complexity Low_complexity 1 29 0 429 300 23 0 chr2 147934199 147934329 -105322254 - MIR3 SINE MIR -7 201 69 327 324 43 53 chr2 147935010 147935217 -105321366 - L2 LINE L2 -421 2893 2689 241 73 0 55 chr2 147935882 147935937 -105320646 + (CAAAAA)n Simple_repeat Simple_repeat 2 53 0 21 0 0 0 chr2 147937070 147937091 -105319492 + AT_rich Low_complexity Low_complexity 1 21 0 1430 155 23 12 chr2 147937209 147937509 -105319074 - MER61B LTR ERV1 -28 396 1 367 252 17 17 chr2 147937576 147937695 -105318888 - MER97c DNA MER1_type? -911 179 61 254 95 24 0 chr2 147938910 147938952 -105317631 + (TA)n Simple_repeat Simple_repeat 1 43 0 324 0 0 0 chr2 147939327 147939363 -105317220 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 453 268 68 27 chr2 147939488 147939708 -105316875 + LTR16B LTR ERVL 236 464 0 21 0 0 0 chr2 147940514 147940535 -105316048 + AT_rich Low_complexity Low_complexity 1 21 0 2039 127 3 16 chr2 147940545 147940859 -105315724 + AluSx SINE Alu 1 310 -2 26 0 0 0 chr2 147941130 147941156 -105315427 + AT_rich Low_complexity Low_complexity 1 26 0 240 325 24 0 chr2 147941328 147941411 -105315172 + MIR SINE MIR 70 154 -108 1823 158 0 3 chr2 147941411 147941728 -105314855 + AluSx SINE Alu 1 316 0 383 298 72 56 chr2 147941824 147942129 -105314454 + HAL1b LINE L1 492 801 -547 22 56 0 0 chr2 147942170 147942206 -105314377 + AT_rich Low_complexity Low_complexity 1 36 0 2002 119 4 0 chr2 147942805 147943083 -105313500 - AluSc SINE Alu -30 279 1 27 0 0 0 chr2 147943625 147943652 -105312931 + AT_rich Low_complexity Low_complexity 1 27 0 1603 126 19 11 chr2 147944589 147944850 -105311733 - L1PB2 LINE L1 -1 6150 5888 4272 32 0 17 chr2 147945259 147945786 -105310797 - L1PA5 LINE L1 -21 6133 5616 462 286 167 0 chr2 147947827 147948019 -105308564 + MIR SINE MIR 34 257 -5 228 192 13 77 chr2 147948389 147948467 -105308116 + L1M4 LINE L1 5161 5233 -913 463 160 106 0 chr2 147948511 147948605 -105307978 + MER53 DNA DNA 2 105 -84 795 298 86 45 chr2 147948933 147949317 -105307266 + LTR33 LTR ERVL 53 459 -62 785 161 0 8 chr2 147949317 147949447 -105307136 + FLAM_C SINE Alu 1 129 -4 795 298 86 45 chr2 147949447 147949505 -105307078 + LTR33 LTR ERVL 459 513 -8 619 287 83 14 chr2 147949509 147950032 -105306551 - L1ME LINE L1 -512 5650 5096 231 327 19 93 chr2 147950035 147950197 -105306386 + L2 LINE L2 3123 3272 0 21 0 0 0 chr2 147950779 147950800 -105305783 + GC_rich Low_complexity Low_complexity 1 21 0 255 308 27 96 chr2 147952842 147952945 -105303638 - MER5A DNA MER1_type -1 188 96 1184 197 79 16 chr2 147952945 147953250 -105303333 - MER33 DNA MER1_type 0 324 1 255 308 27 96 chr2 147953250 147953292 -105303291 - MER5A DNA MER1_type -93 96 53 303 374 18 0 chr2 147953597 147953719 -105302864 - MIR SINE MIR -73 135 7 229 315 86 24 chr2 147955189 147955317 -105301266 - MIR SINE MIR -64 144 8 365 148 0 0 chr2 147955469 147955530 -105301053 + MER116 DNA Mariner 20 80 0 13413 29 0 0 chr2 147956796 147959172 -105297411 + L1PA2 LINE L1 3797 6172 0 22 88 0 0 chr2 147959172 147959229 -105297354 + AT_rich Low_complexity Low_complexity 1 57 0 273 261 146 115 chr2 147959526 147959821 -105296762 - L2 LINE L2 0 3313 3010 203 349 98 23 chr2 147959827 147959959 -105296624 - L2 LINE L2 -421 2893 2752 4662 161 35 50 chr2 147962530 147963647 -105292936 - L1MA7 LINE L1 -11 6280 5181 261 250 0 0 chr2 147966940 147966996 -105289587 - L2 LINE L2 -31 3241 3186 24 53 0 0 chr2 147968366 147968404 -105288179 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr2 147969700 147969721 -105286862 + AT_rich Low_complexity Low_complexity 1 21 0 268 375 79 27 chr2 147970575 147970903 -105285680 - L3 LINE CR1 -205 1372 1028 495 240 115 31 chr2 147971838 147972030 -105284553 + MER3 DNA MER1_type 1 208 -1 484 264 50 7 chr2 147972236 147972376 -105284207 + MIR3 SINE MIR 59 204 -4 495 339 117 22 chr2 147972387 147972854 -105283729 - L2 LINE L2 -175 3138 2633 553 306 44 44 chr2 147972903 147973200 -105283383 + MLT1J1 LTR MaLR 45 341 -105 2218 118 0 0 chr2 147974966 147975272 -105281311 + AluSq SINE Alu 1 306 -7 895 51 8 0 chr2 147975349 147975467 -105281116 - L1PA4 LINE L1 -2 6153 6035 631 130 69 15 chr2 147977341 147977472 -105279111 + L1MB4 LINE L1 6042 6179 -1 358 280 51 8 chr2 147978112 147978230 -105278353 + MIR SINE MIR 53 175 -87 225 154 0 0 chr2 147978737 147978776 -105277807 + T-rich Low_complexity Low_complexity 1 39 0 24 32 0 0 chr2 147980642 147980673 -105275910 + AT_rich Low_complexity Low_complexity 1 31 0 1524 141 91 55 chr2 147980735 147981096 -105275487 + THE1C LTR MaLR 1 374 -1 181 191 43 0 chr2 147981203 147981250 -105275333 + MIR3 SINE MIR 153 201 -7 23 33 0 0 chr2 147981508 147981538 -105275045 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr2 147981585 147981607 -105274976 + AT_rich Low_complexity Low_complexity 1 22 0 246 189 19 0 chr2 147982644 147982697 -105273886 - MER116 DNA Mariner -24 56 3 195 391 23 0 chr2 147982874 147982961 -105273622 - MIR SINE MIR -162 100 12 923 188 194 51 chr2 147983125 147983418 -105273165 + MER2 DNA MER2_type 7 341 -4 239 314 116 0 chr2 147984618 147984704 -105271879 - LTR33A LTR ERVL -365 158 63 259 294 24 0 chr2 147985680 147985765 -105270818 + (TATG)n Simple_repeat Simple_repeat 2 88 0 27 0 0 0 chr2 147986261 147986288 -105270295 + AT_rich Low_complexity Low_complexity 1 27 0 1558 188 53 78 chr2 147986291 147986803 -105269780 - MLT1D LTR MaLR -2 503 5 1574 105 156 0 chr2 147987158 147987415 -105269168 + AluSc SINE Alu 1 297 -2 296 296 129 0 chr2 147987578 147987710 -105268873 + MIR SINE MIR 100 248 -14 24 0 0 0 chr2 147987854 147987878 -105268705 + AT_rich Low_complexity Low_complexity 1 24 0 3623 188 70 42 chr2 147988312 147988631 -105267952 + MER4-int LTR ERV1 852 1161 -5437 234 0 0 0 chr2 147988631 147988657 -105267926 + (CA)n Simple_repeat Simple_repeat 2 27 0 3623 188 70 42 chr2 147988657 147988668 -105267915 + MER4-int LTR ERV1 1161 1170 -5428 922 200 0 0 chr2 147988668 147988833 -105267750 - FRAM SINE Alu -1 165 1 189 0 0 0 chr2 147988835 147988856 -105267727 + (TA)n Simple_repeat Simple_repeat 1 21 0 3623 188 70 42 chr2 147988856 147989490 -105267093 + MER4-int LTR ERV1 1170 1847 -4751 3834 145 88 43 chr2 147989711 147990544 -105266039 - MER4D LTR ERV1 -2 870 1 262 121 24 36 chr2 147991151 147991234 -105265349 + (TA)n Simple_repeat Simple_repeat 1 82 0 398 304 67 49 chr2 147991835 147992059 -105264524 - MIR SINE MIR 0 262 35 2104 127 36 30 chr2 147992059 147992421 -105264162 + THE1B LTR MaLR 1 364 0 27 29 0 0 chr2 147993312 147993346 -105263237 + AT_rich Low_complexity Low_complexity 1 34 0 240 324 15 0 chr2 147994366 147994434 -105262149 - L2 LINE L2 -8 3264 3196 210 261 58 14 chr2 147994504 147994573 -105262010 - MER91B DNA MER1_type -10 180 109 348 300 123 48 chr2 147995019 147995246 -105261337 + MIR SINE MIR 18 261 -1 238 152 76 13 chr2 147995612 147995691 -105260892 + (TA)n Simple_repeat Simple_repeat 2 85 0 2023 125 0 20 chr2 147995750 147996053 -105260530 + AluSx SINE Alu 1 297 -15 371 123 32 70 chr2 147996179 147996366 -105260217 + (TA)n Simple_repeat Simple_repeat 1 180 0 237 65 0 0 chr2 147997073 147997104 -105259479 + (A)n Simple_repeat Simple_repeat 1 31 0 254 313 62 39 chr2 147998996 147999124 -105257459 + MIR SINE MIR 60 190 -72 22 0 0 0 chr2 148000024 148000046 -105256537 + AT_rich Low_complexity Low_complexity 1 22 0 467 232 30 18 chr2 148000888 148001052 -105255531 + (TATATG)n Simple_repeat Simple_repeat 3 168 0 230 192 82 14 chr2 148001063 148001136 -105255447 + L1MC4 LINE L1 6616 6693 -1349 227 275 0 0 chr2 148001139 148001208 -105255375 + (TA)n Simple_repeat Simple_repeat 1 69 0 596 301 19 5 chr2 148001247 148001460 -105255123 + MER20 DNA MER1_type 1 216 -3 2479 54 0 3 chr2 148001472 148001770 -105254813 + AluY SINE Alu 14 310 -1 221 386 38 15 chr2 148003683 148003815 -105252768 - MIR3 SINE MIR -9 199 65 29 70 0 0 chr2 148004875 148004932 -105251651 + AT_rich Low_complexity Low_complexity 1 57 0 3102 137 84 0 chr2 148004965 148005476 -105251107 + MER41C LTR ERV1 1 554 0 202 381 17 23 chr2 148005530 148005706 -105250877 - L2 LINE L2 -973 2341 2167 243 206 16 0 chr2 148006095 148006158 -105250425 + A-rich Low_complexity Low_complexity 3 66 0 6842 48 11 14 chr2 148006397 148006898 -105249685 + L1PA7 LINE L1 4829 5330 -824 2485 47 3 0 chr2 148006898 148007199 -105249384 + AluY SINE Alu 1 302 -9 6842 48 11 14 chr2 148007199 148008011 -105248572 + L1PA7 LINE L1 5330 6139 -15 231 88 0 0 chr2 148008011 148008045 -105248538 + (TA)n Simple_repeat Simple_repeat 1 34 0 233 300 0 0 chr2 148008052 148008142 -105248441 - L1MC4 LINE L1 -1339 6703 6614 240 200 0 0 chr2 148008145 148008195 -105248388 + (TATATG)n Simple_repeat Simple_repeat 1 50 0 271 191 56 90 chr2 148008663 148008752 -105247831 + L2 LINE L2 3179 3264 -8 1404 171 20 48 chr2 148008780 148009073 -105247510 + AluJb SINE Alu 4 288 -24 24 91 0 0 chr2 148009680 148009746 -105246837 + AT_rich Low_complexity Low_complexity 1 66 0 1064 291 97 34 chr2 148010540 148011297 -105245286 + L2 LINE L2 2448 3251 -62 21 0 0 0 chr2 148011898 148011919 -105244664 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 148012945 148012969 -105243614 + AT_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr2 148013559 148013579 -105243004 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2015 124 0 19 chr2 148013840 148014154 -105242429 - AluSg SINE Alu -2 308 1 715 206 34 17 chr2 148015511 148015686 -105240897 - MER5A DNA MER1_type -5 184 7 199 283 236 9 chr2 148016045 148016151 -105240432 - L2 LINE L2 0 3313 3184 260 258 16 50 chr2 148016554 148016687 -105239896 - MIR SINE MIR -76 186 17 523 283 78 6 chr2 148018729 148018853 -105237730 - MIR SINE MIR -14 248 108 225 0 0 0 chr2 148018853 148018878 -105237705 + (CA)n Simple_repeat Simple_repeat 2 26 0 523 283 78 6 chr2 148018878 148018919 -105237664 - MIR SINE MIR -154 108 71 2995 229 52 16 chr2 148019370 148020203 -105236380 - L1ME1 LINE L1 -16 6150 5288 307 243 75 37 chr2 148020289 148020396 -105236187 + MER5A DNA MER1_type 22 132 -57 504 197 0 68 chr2 148020411 148020528 -105236055 + L1MC/D LINE L1 5412 5520 -839 1851 0 0 0 chr2 148022514 148022722 -105233861 - L1HS LINE L1 0 6155 5948 1674 203 121 17 chr2 148022912 148023325 -105233258 + MLT1C LTR MaLR 10 465 -2 211 318 59 0 chr2 148025969 148026054 -105230529 + L2 LINE L2 3178 3267 -5 390 285 0 54 chr2 148026515 148026701 -105229882 + MER5B DNA MER1_type 3 178 0 2514 103 11 0 chr2 148026954 148027304 -105229279 + THE1A LTR MaLR 2 355 0 21 36 0 0 chr2 148027837 148027865 -105228718 + AT_rich Low_complexity Low_complexity 1 28 0 301 316 85 29 chr2 148028787 148028924 -105227659 + MIR3 SINE MIR 15 159 -49 405 328 185 20 chr2 148029125 148029466 -105227117 - L3 LINE CR1 -129 1448 1052 182 182 23 23 chr2 148029682 148029726 -105226857 - MIR SINE MIR -35 227 184 494 305 76 74 chr2 148030916 148031405 -105225178 - L3 LINE CR1 -821 756 267 378 346 4 10 chr2 148036887 148037045 -105219538 - MIR SINE MIR -31 177 18 192 254 36 18 chr2 148037784 148037839 -105218744 + MIR SINE MIR 204 259 -3 304 324 36 2 chr2 148038087 148038227 -105218356 - MIR SINE MIR -47 161 16 276 252 73 49 chr2 148038317 148038440 -105218143 + MER91C DNA MER1_type 15 140 0 1103 269 127 12 chr2 148038753 148039154 -105217429 + MLT1J2 LTR MaLR 1 447 -3 288 315 43 25 chr2 148039446 148039605 -105216978 - MIR SINE MIR -47 161 1 206 266 38 0 chr2 148041322 148041401 -105215182 + (CATATA)n Simple_repeat Simple_repeat 2 83 0 359 330 47 19 chr2 148042366 148042578 -105214005 + L1ME LINE L1 5491 5708 -413 2138 103 7 3 chr2 148042643 148042945 -105213638 - AluSg SINE Alu 0 310 8 185 197 16 0 chr2 148044652 148044713 -105211870 + (TA)n Simple_repeat Simple_repeat 1 62 0 201 340 87 73 chr2 148044906 148045194 -105211389 - L2 LINE L2 -4 3268 2977 181 254 79 32 chr2 148045827 148045890 -105210693 + L2 LINE L2 3143 3208 -64 402 345 97 32 chr2 148046216 148046494 -105210089 - L2 LINE L2 -10 3303 3008 2195 119 0 0 chr2 148047046 148047348 -105209235 + AluSx SINE Alu 2 303 -9 23 0 0 0 chr2 148047933 148047956 -105208627 + AT_rich Low_complexity Low_complexity 1 23 0 1318 142 55 5 chr2 148049620 148049839 -105206744 - MER30 DNA MER1_type 0 230 1 200 310 17 0 chr2 148049867 148049925 -105206658 + L2 LINE L2 3205 3263 -9 392 306 61 27 chr2 148050037 148050184 -105206399 + MIR SINE MIR 55 206 -56 885 189 42 14 chr2 148050278 148050490 -105206093 + L1MB8 LINE L1 5947 6164 -14 22 56 0 0 chr2 148055972 148056008 -105200575 + AT_rich Low_complexity Low_complexity 1 36 0 1506 195 52 96 chr2 148056339 148056841 -105199742 - MLT1D LTR MaLR -3 502 23 793 201 26 188 chr2 148056886 148057269 -105199314 - MLT1D-int LTR MaLR -15 1356 1036 2208 233 26 41 chr2 148057339 148057997 -105198586 - MLT1D-int LTR MaLR -722 649 2 1904 201 43 51 chr2 148057998 148058505 -105198078 - MLT1D LTR MaLR 0 505 3 233 318 56 24 chr2 148059236 148059362 -105197221 + MER5B DNA MER1_type 2 131 -47 246 125 0 0 chr2 148060167 148060215 -105196368 + (TC)n Simple_repeat Simple_repeat 1 48 0 21 0 0 0 chr2 148060977 148060998 -105195585 + AT_rich Low_complexity Low_complexity 1 21 0 582 271 53 48 chr2 148061414 148061621 -105194962 - MIR SINE MIR -6 256 49 188 364 157 17 chr2 148062479 148062562 -105194021 + L2 LINE L2 2037 2107 -1207 1115 266 15 26 chr2 148062562 148062904 -105193679 + MER58B DNA MER1_type 1 338 -3 188 364 157 17 chr2 148062904 148063424 -105193159 + L2 LINE L2 2107 2725 -589 1385 124 55 0 chr2 148063663 148063881 -105192702 - MER30 DNA MER1_type 0 230 1 2194 123 88 13 chr2 148064825 148065223 -105191360 + MSTA LTR MaLR 1 428 0 321 396 74 25 chr2 148065479 148066198 -105190385 + L2 LINE L2 2036 2789 -525 221 250 0 0 chr2 148066869 148066921 -105189662 + CT-rich Low_complexity Low_complexity 2 53 0 24 0 0 0 chr2 148068610 148068634 -105187949 + AT_rich Low_complexity Low_complexity 1 24 0 284 350 126 11 chr2 148069653 148069836 -105186747 + MIR SINE MIR 32 235 -27 2136 129 0 7 chr2 148070676 148070986 -105185597 - AluSx SINE Alu -4 308 1 183 42 0 0 chr2 148071702 148071726 -105184857 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 759 189 0 0 chr2 148072827 148072954 -105183629 - FLAM_A SINE Alu -6 127 1 696 266 6 18 chr2 148073017 148073186 -105183397 - MIR SINE MIR -66 196 30 2145 107 0 7 chr2 148075160 148075458 -105181125 - AluSx SINE Alu -16 296 1 291 302 50 90 chr2 148075736 148075958 -105180625 + L2 LINE L2 2478 2690 -624 194 371 16 0 chr2 148076547 148076609 -105179974 + L2 LINE L2 3134 3196 -76 * 206 171 0 0 chr2 148076600 148076635 -105179948 - L2 LINE L2 0 3272 3238 1787 92 15 26 chr2 148077518 148077829 -105178754 + AluSc SINE Alu 14 321 0 339 203 0 0 chr2 148077907 148077976 -105178607 + MER53 DNA DNA 121 189 0 30 77 0 0 chr2 148078741 148078806 -105177777 + AT_rich Low_complexity Low_complexity 1 65 0 28 48 0 0 chr2 148079257 148079299 -105177284 + AT_rich Low_complexity Low_complexity 1 42 0 2524 58 0 0 chr2 148079870 148080179 -105176404 + AluY SINE Alu 1 309 -2 504 242 42 8 chr2 148080220 148080340 -105176243 - L2 LINE L2 -10 3303 3180 193 235 37 49 chr2 148081484 148081565 -105175018 - MIR SINE MIR -58 204 125 29 28 0 0 chr2 148082072 148082108 -105174475 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 73 chr2 148082548 148082589 -105173994 + AT_rich Low_complexity Low_complexity 1 38 0 408 307 129 80 chr2 148082849 148083377 -105173206 + MLT1L LTR MaLR 43 596 -19 189 0 0 0 chr2 148083807 148083828 -105172755 + (TG)n Simple_repeat Simple_repeat 2 22 0 1693 211 31 3 chr2 148085069 148085424 -105171159 - MLT1A1 LTR MaLR 0 365 1 202 247 123 0 chr2 148085838 148085911 -105170672 + MIR SINE MIR 54 135 -73 33 85 0 0 chr2 148085915 148085997 -105170586 + AT_rich Low_complexity Low_complexity 1 82 0 1211 171 31 0 chr2 148087896 148088124 -105168459 - L1PA16 LINE L1 -2 6164 5930 195 161 0 0 chr2 148088314 148088345 -105168238 + L2 LINE L2 3183 3213 -100 25 31 0 0 chr2 148089581 148089613 -105166970 + AT_rich Low_complexity Low_complexity 1 32 0 308 294 0 0 chr2 148092188 148092256 -105164327 + polypurine Low_complexity Low_complexity 3 70 0 580 302 85 27 chr2 148092896 148093297 -105163286 + MARNA DNA Mariner 148 571 -15 32 0 0 0 chr2 148093810 148093842 -105162741 + AT_rich Low_complexity Low_complexity 1 32 0 192 346 129 10 chr2 148096492 148096593 -105159990 - L2 LINE L2 -540 2774 2662 21 0 0 0 chr2 148097077 148097098 -105159485 + AT_rich Low_complexity Low_complexity 1 21 0 387 337 47 57 chr2 148097631 148097824 -105158759 - MIR SINE MIR -50 212 22 26 50 0 0 chr2 148098216 148098256 -105158327 + AT_rich Low_complexity Low_complexity 1 40 0 1793 188 80 19 chr2 148098476 148098849 -105157734 + MSTD LTR MaLR 1 396 0 2041 103 0 60 chr2 148098891 148099216 -105157367 - AluSx SINE Alu 0 309 3 30 0 0 0 chr2 148099227 148099257 -105157326 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr2 148099414 148099437 -105157146 + AT_rich Low_complexity Low_complexity 1 23 0 523 355 36 18 chr2 148102163 148102329 -105154254 - MER91A DNA MER1_type -6 190 22 342 332 137 32 chr2 148102443 148102633 -105153950 - MIR SINE MIR -21 241 32 201 239 0 0 chr2 148103046 148103092 -105153491 + (CTA)n Simple_repeat Simple_repeat 1 46 0 340 298 53 8 chr2 148103117 148103248 -105153335 - MIR SINE MIR -59 203 67 479 259 20 27 chr2 148104129 148104276 -105152307 - MIR3 SINE MIR -60 148 3 374 365 6 0 chr2 148104927 148105086 -105151497 - MER117 DNA MER1_type -36 161 2 3357 154 52 6 chr2 148105437 148106085 -105150498 + L1MA4 LINE L1 5622 6299 -1 947 195 29 29 chr2 148106250 148106460 -105150123 + L1MD3 LINE L1 6787 6996 -999 726 54 80 11 chr2 148106565 148106924 -105149659 + (TA)n Simple_repeat Simple_repeat 1 383 0 304 222 0 22 chr2 148106926 148107016 -105149567 + L1MC4 LINE L1 7066 7153 -889 1614 160 89 3 chr2 148107019 148107301 -105149282 + AluSx SINE Alu 3 308 -4 1840 234 51 17 chr2 148107307 148107832 -105148751 + L1MD3 LINE L1 7443 7985 -10 219 36 0 0 chr2 148108682 148108710 -105147873 + (TG)n Simple_repeat Simple_repeat 1 28 0 186 43 0 0 chr2 148108709 148108732 -105147851 + (GA)n Simple_repeat Simple_repeat 1 23 0 * 453 283 78 6 chr2 148108766 148108932 -105147651 + Charlie8 DNA MER1_type 87 264 -2153 2050 133 13 0 chr2 148111195 148111495 -105145088 - AluSx SINE Alu -8 304 1 491 328 136 36 chr2 148112240 148112924 -105143659 + L2 LINE L2 2553 3313 0 25 0 0 0 chr2 148113061 148113086 -105143497 + AT_rich Low_complexity Low_complexity 1 25 0 1259 110 6 0 chr2 148115119 148115301 -105141282 - L1PA14 LINE L1 -1 6160 5978 22 103 0 0 chr2 148118314 148118392 -105138191 + AT_rich Low_complexity Low_complexity 1 78 0 438 20 0 0 chr2 148118451 148118502 -105138081 + (TCCA)n Simple_repeat Simple_repeat 3 53 0 489 34 0 0 chr2 148120664 148120723 -105135860 + (TC)n Simple_repeat Simple_repeat 2 60 0 26 30 0 0 chr2 148121872 148121905 -105134678 + GC_rich Low_complexity Low_complexity 1 33 0 181 28 111 0 chr2 148122830 148122866 -105133717 + T-rich Low_complexity Low_complexity 2 41 0 1422 69 5 5 chr2 148123559 148123747 -105132836 - AluY SINE Alu -13 298 111 225 94 0 0 chr2 148123914 148123946 -105132637 + (TG)n Simple_repeat Simple_repeat 1 32 0 * 237 33 0 0 chr2 148123945 148123975 -105132608 + (GA)n Simple_repeat Simple_repeat 1 30 0 2239 99 0 7 chr2 148124826 148125130 -105131453 + AluSc SINE Alu 1 302 -7 250 250 16 0 chr2 148126277 148126341 -105130242 + GA-rich Low_complexity Low_complexity 1 65 0 346 366 29 23 chr2 148127379 148127554 -105129029 - MIR3 SINE MIR -1 207 32 216 67 0 0 chr2 148127586 148127616 -105128967 + (TTG)n Simple_repeat Simple_repeat 2 31 0 309 309 75 0 chr2 148127654 148127748 -105128835 - L2 LINE L2 0 3313 3213 199 286 0 0 chr2 148128927 148128976 -105127607 + L2 LINE L2 3218 3266 -6 344 77 19 0 chr2 148129963 148130015 -105126568 + (TA)n Simple_repeat Simple_repeat 1 53 0 31 26 0 0 chr2 148131694 148131732 -105124851 + AT_rich Low_complexity Low_complexity 1 38 0 1972 147 3 0 chr2 148132250 148132543 -105124040 + AluSx SINE Alu 1 294 -18 186 336 107 8 chr2 148133166 148133288 -105123295 - L2 LINE L2 -210 3062 2929 246 350 25 0 chr2 148134716 148134796 -105121787 - L2 LINE L2 -5 3267 3186 303 322 50 57 chr2 148135183 148135466 -105121117 + L1M4 LINE L1 4547 4827 -1319 2253 116 3 0 chr2 148136434 148136745 -105119838 + AluSq SINE Alu 1 312 -1 291 315 63 14 chr2 148136951 148137094 -105119489 + MIR SINE MIR 84 233 -29 355 341 67 0 chr2 148137298 148137462 -105119121 - MER5B DNA MER1_type -3 175 1 2220 102 3 10 chr2 148137556 148137870 -105118713 + AluSx SINE Alu 1 312 0 234 337 30 50 chr2 148138834 148138935 -105117648 - MIR SINE MIR -63 145 47 320 43 22 0 chr2 148140114 148140160 -105116423 + (TC)n Simple_repeat Simple_repeat 2 48 0 282 194 0 0 chr2 148140159 148140226 -105116357 + (TG)n Simple_repeat Simple_repeat 2 68 0 * 238 332 53 75 chr2 148140312 148140631 -105115952 + L2 LINE L2 2388 2699 -615 286 278 93 0 chr2 148140671 148140768 -105115815 + MIR SINE MIR 72 177 -85 306 353 77 41 chr2 148140791 148140961 -105115622 - MIR3 SINE MIR -24 184 9 291 122 0 0 chr2 148141722 148141771 -105114812 + (CAT)n Simple_repeat Simple_repeat 3 51 0 257 275 121 40 chr2 148141792 148141941 -105114642 - MIR SINE MIR -13 249 89 351 0 0 0 chr2 148141970 148142009 -105114574 + (TTA)n Simple_repeat Simple_repeat 3 41 0 1011 33 0 0 chr2 148142009 148142129 -105114454 - L1PA5 LINE L1 -18 6136 6017 191 163 0 23 chr2 148143705 148143748 -105112835 + CT-rich Low_complexity Low_complexity 4 45 0 798 171 17 6 chr2 148143752 148143928 -105112655 + T-rich Low_complexity Low_complexity 1 178 0 216 97 0 0 chr2 148143929 148143960 -105112623 + (TTCC)n Simple_repeat Simple_repeat 4 34 0 1449 185 0 29 chr2 148143960 148144241 -105112342 - AluJb SINE Alu -39 273 1 3723 236 48 14 chr2 148144272 148146190 -105110393 - L1MB7 LINE L1 -89 6095 4104 2269 84 3 3 chr2 148146199 148146498 -105110085 + AluY SINE Alu 1 299 -12 4267 200 64 71 chr2 148146517 148146686 -105109897 - L1M4 LINE L1 -4764 1880 1711 1840 36 0 0 chr2 148146686 148146906 -105109677 + L1PA3 LINE L1 5934 6153 -2 4267 200 64 71 chr2 148146906 148148200 -105108383 - L1M4 LINE L1 -4933 1711 309 25 0 0 0 chr2 148148371 148148396 -105108187 + AT_rich Low_complexity Low_complexity 1 25 0 710 317 138 37 chr2 148148912 148149811 -105106772 + L1ME3 LINE L1 2778 3767 -2379 257 135 19 0 chr2 148149820 148149872 -105106711 + GA-rich Low_complexity Low_complexity 1 53 0 240 150 0 0 chr2 148150466 148150506 -105106077 + MER116 DNA Mariner 2 41 -39 255 262 0 16 chr2 148150599 148150660 -105105923 + GA-rich Low_complexity Low_complexity 3 62 0 394 272 80 28 chr2 148150691 148150904 -105105679 + L1ME3 LINE L1 5096 5319 -827 234 254 64 18 chr2 148150945 148151055 -105105528 + L1ME3 LINE L1 5374 5488 -2320 13262 151 24 10 chr2 148151145 148151510 -105105073 + L1PA13 LINE L1 2849 3207 -2956 189 0 0 0 chr2 148151510 148151531 -105105052 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 13262 151 24 10 chr2 148151531 148153708 -105102875 + L1PA13 LINE L1 3207 5448 -715 1748 189 7 0 chr2 148153708 148154005 -105102578 + AluSx SINE Alu 1 299 -13 13262 151 24 10 chr2 148154005 148154728 -105101855 + L1PA13 LINE L1 5448 6159 -4 337 316 61 68 chr2 148154796 148155074 -105101509 + L1ME3 LINE L1 5676 5951 -211 21 0 0 0 chr2 148155319 148155340 -105101243 + AT_rich Low_complexity Low_complexity 1 21 0 211 192 154 0 chr2 148155489 148155541 -105101042 + MIR3 SINE MIR 146 205 -3 206 30 91 0 chr2 148155901 148155934 -105100649 + A-rich Low_complexity Low_complexity 4 39 0 274 269 8 17 chr2 148156254 148156373 -105100210 + (TA)n Simple_repeat Simple_repeat 1 118 0 334 278 9 44 chr2 148156448 148156591 -105099992 + L1ME LINE L1 5504 5643 -527 21 57 0 0 chr2 148157469 148157504 -105099079 + AT_rich Low_complexity Low_complexity 1 35 0 1594 171 27 3 chr2 148157854 148158146 -105098437 + L1MA9 LINE L1 5375 5673 -639 983 241 34 21 chr2 148158149 148158440 -105098143 + L1MA9 LINE L1 5977 6271 -41 2079 35 4 0 chr2 148158468 148158723 -105097860 - L1PA4 LINE L1 -179 5976 5721 1403 30 0 0 chr2 148158726 148158893 -105097690 + L1PA4 LINE L1 5986 6152 -3 28 0 0 0 chr2 148158893 148158921 -105097662 + AT_rich Low_complexity Low_complexity 1 28 0 732 283 78 9 chr2 148158936 148159155 -105097428 - MIR SINE MIR 0 262 29 831 201 6 6 chr2 148159729 148159893 -105096690 + L1M2 LINE L1 5612 5775 -537 188 364 27 18 chr2 148161260 148161370 -105095213 - MIR SINE MIR -121 141 31 222 91 0 0 chr2 148161404 148161437 -105095146 + (CA)n Simple_repeat Simple_repeat 2 34 0 300 317 0 0 chr2 148162716 148162798 -105093785 - L1MC4 LINE L1 -1346 6696 6615 368 285 59 47 chr2 148163218 148163424 -105093159 - L1M2 LINE L1 -610 5556 5362 2772 3 0 0 chr2 148163772 148164075 -105092508 + AluYa5 SINE Alu 1 303 -8 185 261 80 68 chr2 148164115 148164203 -105092380 - MER5C DNA MER1_type -230 94 6 230 179 18 0 chr2 148164264 148164320 -105092263 + (TATATG)n Simple_repeat Simple_repeat 4 60 0 389 125 0 62 chr2 148164957 148165021 -105091562 - Tigger5 DNA MER2_type 0 2323 2264 298 211 0 0 chr2 148165117 148165169 -105091414 - Tigger5 DNA MER2_type -2271 52 1 23 54 0 0 chr2 148165294 148165331 -105091252 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr2 148166245 148166266 -105090317 + AT_rich Low_complexity Low_complexity 1 21 0 237 311 106 0 chr2 148166632 148166764 -105089819 + L1MC/D LINE L1 5620 5765 -2043 638 353 48 37 chr2 148167905 148168361 -105088222 - L3 LINE CR1 -781 796 336 1983 138 52 19 chr2 148168917 148169279 -105087304 + THE1C LTR MaLR 2 375 0 544 290 218 10 chr2 148169521 148169828 -105086755 - L2 LINE L2 -1 3312 2942 37 90 0 0 chr2 148170015 148170115 -105086468 + AT_rich Low_complexity Low_complexity 1 100 0 3097 151 49 53 chr2 148171756 148172552 -105084031 + LTR1 LTR ERV1 37 785 0 1785 121 4 4 chr2 148172758 148173023 -105083560 - AluSc SINE Alu -6 303 39 733 248 0 0 chr2 148173157 148173302 -105083281 + AluJb SINE Alu 139 283 -29 2377 123 19 6 chr2 148173970 148174329 -105082254 + THE1B LTR MaLR 1 364 0 1057 322 64 38 chr2 148174892 148175091 -105081492 - MER20B DNA MER1_type -5 778 586 2109 118 0 7 chr2 148175091 148175388 -105081195 - AluSc SINE Alu -12 297 3 1057 322 64 38 chr2 148175388 148175416 -105081167 - MER20B DNA MER1_type -197 586 560 2130 127 33 25 chr2 148175416 148175777 -105080806 - THE1B LTR MaLR 0 364 1 1057 322 64 38 chr2 148175777 148176278 -105080305 - MER20B DNA MER1_type -223 560 30 22 56 0 0 chr2 148176401 148176437 -105080146 + AT_rich Low_complexity Low_complexity 1 36 0 361 282 39 21 chr2 148176754 148176908 -105079675 + MIR3 SINE MIR 34 191 -17 1725 80 0 0 chr2 148176920 148177133 -105079450 - AluSq SINE Alu -20 293 81 274 196 33 11 chr2 148177647 148177739 -105078844 + (TA)n Simple_repeat Simple_repeat 2 95 0 3209 159 8 26 chr2 148177756 148178374 -105078209 - L1MA6 LINE L1 0 6300 5694 2140 119 0 3 chr2 148179008 148179318 -105077265 + AluSx SINE Alu 1 309 -3 197 258 76 0 chr2 148179620 148179686 -105076897 + L2 LINE L2 3227 3297 -16 1214 169 149 45 chr2 148179711 148180160 -105076423 + LTR54B LTR ERV1 1 496 -2 213 225 0 0 chr2 148180233 148180273 -105076310 + (CATATA)n Simple_repeat Simple_repeat 6 45 0 229 409 31 24 chr2 148180287 148180414 -105076169 - MER5A DNA MER1_type -1 188 61 464 179 11 11 chr2 148180851 148180946 -105075637 - MER46C DNA MER2_type -1 337 243 554 271 45 32 chr2 148181525 148181746 -105074837 - MER46C DNA MER2_type -92 246 23 270 152 30 30 chr2 148182161 148182227 -105074356 + LTR33A LTR ERVL 458 523 0 24 0 0 0 chr2 148182941 148182965 -105073618 + AT_rich Low_complexity Low_complexity 1 24 0 217 0 0 57 chr2 148183864 148183899 -105072684 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 499 258 12 18 chr2 148183899 148184066 -105072517 - L1MC/D LINE L1 -2294 5514 5349 1180 77 0 0 chr2 148184075 148184230 -105072353 - L1PA5 LINE L1 -8 6146 5992 494 230 44 119 chr2 148184710 148184962 -105071621 + L2 LINE L2 3077 3309 -4 725 272 51 18 chr2 148185061 148185278 -105071305 - MER58A DNA MER1_type 0 224 1 1863 171 43 3 chr2 148186068 148186419 -105070164 + L1PA16 LINE L1 5778 6142 -24 735 158 8 16 chr2 148187139 148187266 -105069317 + AluJ SINE Alu 1 126 -176 424 153 25 76 chr2 148187277 148187395 -105069188 + AluJ SINE Alu 201 312 0 194 192 96 0 chr2 148187685 148187737 -105068846 + L2 LINE L2 3257 3313 0 404 282 55 0 chr2 148188583 148188693 -105067890 + L1ME3 LINE L1 5959 6074 -88 24 0 0 0 chr2 148188753 148188777 -105067806 + AT_rich Low_complexity Low_complexity 1 24 0 344 206 103 10 chr2 148190284 148190381 -105066202 - MER58B DNA MER1_type 0 341 236 2257 61 3 7 chr2 148190528 148190823 -105065760 - AluY SINE Alu 0 311 18 561 329 29 38 chr2 148191399 148191715 -105064868 + L2 LINE L2 2419 2731 -583 14549 133 27 15 chr2 148192017 148194388 -105062195 + Tigger1 DNA MER2_type 11 2410 -8 338 342 83 46 chr2 148194397 148194637 -105061946 + L2 LINE L2 3024 3272 0 1772 150 4 0 chr2 148194886 148195160 -105061423 + AluSx SINE Alu 1 275 -37 210 71 0 0 chr2 148195164 148195192 -105061391 + (CAAAA)n Simple_repeat Simple_repeat 1 28 0 2077 69 0 8 chr2 148195826 148196088 -105060495 + AluSg1 SINE Alu 1 260 -49 22 0 0 0 chr2 148196922 148196944 -105059639 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr2 148197305 148197325 -105059258 + (T)n Simple_repeat Simple_repeat 1 20 0 746 312 145 46 chr2 148198385 148199471 -105057112 - HAL1 LINE L1 -1306 1201 9 1890 176 15 50 chr2 148199486 148199889 -105056694 - MLT1B LTR MaLR -1 389 1 23 54 0 0 chr2 148201326 148201363 -105055220 + AT_rich Low_complexity Low_complexity 1 37 0 424 217 19 0 chr2 148202951 148203057 -105053526 + MER103 DNA DNA 49 156 -10 468 305 39 13 chr2 148203564 148203754 -105052829 + MLT1I LTR MaLR 101 277 -132 296 220 20 70 chr2 148203738 148203838 -105052745 + MLT1J2 LTR MaLR 356 450 0 * 351 267 75 0 chr2 148204171 148204291 -105052292 - Charlie1 DNA MER1_type -1 2760 2632 1618 218 16 3 chr2 148204293 148204664 -105051919 - L1MD1 LINE L1 -1 6241 5866 7012 245 79 34 chr2 148204655 148210178 -105046405 - L1MD1 LINE L1 -307 6329 221 793 249 42 15 chr2 148210219 148210484 -105046099 - L1M4b LINE L1 -5310 1549 1278 216 243 0 0 chr2 148210484 148210558 -105046025 + CT-rich Low_complexity Low_complexity 2 75 0 21 36 0 0 chr2 148212467 148212495 -105044088 + AT_rich Low_complexity Low_complexity 1 28 0 2200 108 0 3 chr2 148215423 148215730 -105040853 - AluSp SINE Alu -3 310 5 1488 293 80 29 chr2 148216431 148218122 -105038461 + L1M4 LINE L1 1223 3141 -3997 242 106 0 21 chr2 148218130 148218177 -105038406 + LTR66 LTR ERVL 390 435 -175 260 224 0 17 chr2 148218178 148218236 -105038347 + (TATATG)n Simple_repeat Simple_repeat 6 62 0 243 0 0 0 chr2 148218286 148218313 -105038270 + (TA)n Simple_repeat Simple_repeat 1 27 0 6322 253 56 40 chr2 148218330 148221094 -105035489 + L1M4 LINE L1 3116 5927 -1030 189 0 0 0 chr2 148221094 148221115 -105035468 + (CA)n Simple_repeat Simple_repeat 2 22 0 6322 253 56 40 chr2 148221115 148221162 -105035421 + L1M4 LINE L1 5927 5972 -985 821 225 42 8 chr2 148221168 148221404 -105035179 + L1M4 LINE L1 6389 6632 -363 594 188 88 38 chr2 148221423 148221583 -105035000 - MLT1D LTR MaLR 0 505 338 592 160 9 0 chr2 148221583 148221689 -105034894 + L1MA9 LINE L1 2209 2315 -4474 * 5117 249 28 14 chr2 148221687 148223221 -105033362 + L1MA9 LINE L1 3184 4738 -2050 4050 221 20 16 chr2 148223231 148224009 -105032574 + L1MA9 LINE L1 5334 6107 -847 2064 129 131 8 chr2 148224009 148224390 -105032193 + MSTA LTR MaLR 1 428 0 4050 221 20 16 chr2 148224390 148225193 -105031390 + L1MA9 LINE L1 6107 6920 -34 23 0 0 0 chr2 148226690 148226713 -105029870 + AT_rich Low_complexity Low_complexity 1 23 0 2005 171 5 14 chr2 148228356 148228724 -105027859 + MER47A DNA MER2_type 2 366 0 21 71 0 0 chr2 148228915 148228957 -105027626 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr2 148229822 148229843 -105026740 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 148230118 148230140 -105026443 + AT_rich Low_complexity Low_complexity 1 22 0 1853 192 37 5 chr2 148230195 148230602 -105025981 + L1MA9 LINE L1 5487 5906 -406 1040 194 41 0 chr2 148230617 148230813 -105025770 + MER2 DNA MER2_type 7 210 -135 458 218 0 0 chr2 148230839 148230917 -105025666 + MER2 DNA MER2_type 268 345 0 1049 226 7 94 chr2 148230918 148231321 -105025262 + L1MA9 LINE L1 5906 6273 -39 1569 182 40 57 chr2 148231364 148231716 -105024867 + MER7A DNA MER2_type 2 345 -1 1984 172 99 19 chr2 148231926 148232350 -105024233 + MLT1C LTR MaLR 1 458 -9 189 337 84 12 chr2 148232694 148232777 -105023806 - MER5B DNA MER1_type -46 132 44 24 0 0 0 chr2 148234547 148234571 -105022012 + AT_rich Low_complexity Low_complexity 1 24 0 2410 223 6 6 chr2 148234584 148235091 -105021492 + L1ME1 LINE L1 5514 6020 -146 246 29 0 29 chr2 148235092 148235127 -105021456 + MER3 DNA MER1_type 16 49 -160 312 304 0 0 chr2 148235129 148235231 -105021352 + L1ME1 LINE L1 6060 6161 -5 225 281 62 31 chr2 148235259 148235355 -105021228 - L1ME4a LINE L1 -69 6052 5954 311 280 123 51 chr2 148235471 148235707 -105020876 - L1ME4a LINE L1 -314 5807 5555 1971 164 3 15 chr2 148235712 148236053 -105020530 + MER1B DNA MER1_type 1 337 0 1989 131 0 3 chr2 148236161 148236444 -105020139 + AluSq SINE Alu 2 283 -30 535 302 192 26 chr2 148236742 148237123 -105019460 + LTR33 LTR ERVL 78 521 0 469 135 0 4 chr2 148237434 148237566 -105019017 + MER53 DNA DNA 5 189 0 2068 213 10 10 chr2 148238302 148238715 -105017868 + MSTB LTR MaLR 8 420 -6 576 280 77 31 chr2 148240774 148241035 -105015548 - LTR33 LTR ERVL -28 493 221 1969 255 74 22 chr2 148241035 148241816 -105014767 + L1ME2 LINE L1 4037 4858 -1288 861 188 54 25 chr2 148241830 148242070 -105014513 - L1MC3 LINE L1 -20 7765 7519 * 1470 214 134 49 chr2 148242052 148242300 -105014283 + L1MEc LINE L1 1473 1698 -4517 2330 104 3 0 chr2 148242300 148242635 -105013948 + L1PA13 LINE L1 5822 6157 -6 1470 214 134 49 chr2 148242635 148243123 -105013460 + L1MEc LINE L1 1698 2178 -4037 1413 244 40 30 chr2 148243136 148243607 -105012976 + L1ME2 LINE L1 5679 6154 -10 222 37 0 0 chr2 148243660 148243687 -105012896 + (A)n Simple_repeat Simple_repeat 1 27 0 1482 185 29 7 chr2 148244128 148244404 -105012179 + AluJo SINE Alu 9 290 -22 414 0 0 0 chr2 148246334 148246380 -105010203 + (A)n Simple_repeat Simple_repeat 1 46 0 21 57 0 0 chr2 148246513 148246548 -105010035 + GC_rich Low_complexity Low_complexity 1 35 0 423 0 0 0 chr2 148247226 148247273 -105009310 + (A)n Simple_repeat Simple_repeat 1 47 0 4802 139 17 21 chr2 148247273 148248095 -105008488 - L1PA16 LINE L1 -10 6156 5338 8999 239 34 16 chr2 148248167 148249620 -105006963 - L1PA13 LINE L1 -1752 5832 4407 243 0 0 0 chr2 148249620 148249647 -105006936 + (TG)n Simple_repeat Simple_repeat 2 28 0 8999 239 34 16 chr2 148249647 148251543 -105005040 - L1PA13 LINE L1 -3177 4407 2445 180 0 0 0 chr2 148251543 148251563 -105005020 + (TTG)n Simple_repeat Simple_repeat 2 21 0 8999 239 34 16 chr2 148251563 148251716 -105004867 - L1PA13 LINE L1 -5139 2445 2296 237 315 0 23 chr2 148252476 148252605 -105003978 - L1PA13 LINE L1 -5268 2306 2085 375 60 0 0 chr2 148252607 148252657 -105003926 + (CTGTG)n Simple_repeat Simple_repeat 3 52 0 1330 324 27 31 chr2 148252729 148253318 -105003265 - L1PA13 LINE L1 -6200 1374 788 281 299 23 0 chr2 148254738 148254825 -105001758 + L2 LINE L2 3225 3313 0 2160 183 0 10 chr2 148254861 148255249 -105001334 - MLT1B LTR MaLR 0 390 7 2086 125 0 0 chr2 148255423 148255704 -105000879 + AluSx SINE Alu 1 312 0 207 32 32 0 chr2 148255704 148255735 -105000848 + (CAAA)n Simple_repeat Simple_repeat 1 180 0 186 270 56 34 chr2 148256355 148256444 -105000139 + L3 LINE CR1 568 658 -919 277 150 0 17 chr2 148256538 148256598 -104999985 - MER97a DNA MER1_type? -791 103 45 1952 144 0 10 chr2 148256738 148257050 -104999533 - AluSx SINE Alu -1 311 3 21 0 0 0 chr2 148257130 148257151 -104999432 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr2 148257938 148257975 -104998608 + AT_rich Low_complexity Low_complexity 1 37 0 267 384 27 11 chr2 148259051 148259236 -104997347 - MIR SINE MIR -61 201 14 1182 162 0 0 chr2 148261356 148261535 -104995048 + AluJb SINE Alu 115 293 -19 24 53 0 0 chr2 148261807 148261845 -104994738 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr2 148261941 148261963 -104994620 + AT_rich Low_complexity Low_complexity 1 22 0 747 341 103 0 chr2 148263918 148264267 -104992316 - MER110 LTR ERV1 -74 417 33 1046 246 4 54 chr2 148264830 148265106 -104991477 + MER45C DNA AcHobo 4 265 -688 18239 143 48 42 chr2 148265678 148269078 -104987505 - L1M1 LINE L1 -4125 3440 18 234 0 0 0 chr2 148269300 148269326 -104987257 + (A)n Simple_repeat Simple_repeat 1 26 0 1111 164 0 6 chr2 148269377 148269548 -104987035 - AluJo SINE Alu -136 176 7 743 275 79 18 chr2 148269952 148270345 -104986238 - L1MEd LINE L1 -4862 1257 841 946 276 77 63 chr2 148270359 148270837 -104985746 + L2 LINE L2 2824 3308 -5 228 224 71 0 chr2 148270875 148270960 -104985623 - L1MEd LINE L1 -5273 846 756 359 248 201 13 chr2 148271092 148271241 -104985342 - L1MEd LINE L1 -5447 672 496 1536 245 32 36 chr2 148271615 148272084 -104984499 - MLT1C LTR MaLR 0 467 1 566 281 50 66 chr2 148272087 148272329 -104984254 - Charlie8 DNA MER1_type -2178 239 2 405 330 50 16 chr2 148274173 148274355 -104982228 + MIR3 SINE MIR 21 208 0 * 504 333 13 19 chr2 148274350 148274506 -104982077 - MIR3 SINE MIR -42 166 12 24 32 0 0 chr2 148276109 148276140 -104980443 + AT_rich Low_complexity Low_complexity 1 31 0 2494 40 0 0 chr2 148276140 148276440 -104980143 - L1PA3 LINE L1 -3 6152 5853 23 78 0 0 chr2 148276618 148276669 -104979914 + AT_rich Low_complexity Low_complexity 1 51 0 215 309 87 60 chr2 148277970 148278119 -104978464 + MER5A DNA MER1_type 1 153 -36 433 248 34 107 chr2 148278139 148278373 -104978210 + MIR SINE MIR 19 235 -27 311 211 95 53 chr2 148278385 148278480 -104978103 - MIR SINE MIR -3 259 161 227 283 65 22 chr2 148278954 148279046 -104977537 - MIR SINE MIR -132 130 35 283 216 36 90 chr2 148279734 148279845 -104976738 + MIR SINE MIR 49 153 -109 2249 89 0 71 chr2 148279876 148280212 -104976371 - AluSx SINE Alu 0 312 1 24 53 0 0 chr2 148280886 148280924 -104975659 + AT_rich Low_complexity Low_complexity 1 38 0 1463 176 3 108 chr2 148281308 148281643 -104974940 - AluJo SINE Alu -2 300 1 827 277 6 0 chr2 148281643 148281820 -104974763 + MER5A DNA MER1_type 12 189 0 23 33 0 0 chr2 148282709 148282739 -104973844 + AT_rich Low_complexity Low_complexity 1 30 0 2201 155 35 30 chr2 148284172 148284598 -104971985 + MSTB1 LTR MaLR 5 432 0 1825 148 3 58 chr2 148284764 148285094 -104971489 - AluSx SINE Alu 0 312 1 3709 248 35 25 chr2 148285884 148287014 -104969569 - L1MC4a LINE L1 -6 7802 6661 531 224 12 6 chr2 148287623 148287788 -104968795 + CT-rich Low_complexity Low_complexity 2 167 0 299 344 64 8 chr2 148288432 148288557 -104968026 - L2 LINE L2 0 3272 3141 1347 230 10 44 chr2 148288658 148289041 -104967542 - MLT1A2 LTR MaLR -4 370 1 21 57 0 0 chr2 148289177 148289212 -104967371 + AT_rich Low_complexity Low_complexity 1 35 0 668 213 7 0 chr2 148289485 148289621 -104966962 + L1MCa LINE L1 1 137 -6289 2265 223 23 19 chr2 148289686 148290301 -104966282 + L1M4 LINE L1 3371 3987 -2159 524 249 130 36 chr2 148290473 148290750 -104965833 + L2 LINE L2 2124 2426 -888 240 150 150 17 chr2 148290842 148290902 -104965681 + MER110 LTR ERV1 3 70 -421 2261 215 92 8 chr2 148290907 148290931 -104965652 - MER99 DNA DNA -2 826 805 405 0 0 0 chr2 148290931 148290976 -104965607 + (TG)n Simple_repeat Simple_repeat 2 46 0 2261 215 92 8 chr2 148290976 148291536 -104965047 - MER99 DNA DNA -23 805 193 2218 114 0 7 chr2 148292104 148292411 -104964172 + AluSg SINE Alu 5 309 -1 334 247 26 0 chr2 148292411 148292488 -104964095 - MER99 DNA DNA -748 80 2 1120 268 91 20 chr2 148292492 148292899 -104963684 + MER110 LTR ERV1 36 471 -20 394 271 47 0 chr2 148292939 148293046 -104963537 - MIR SINE MIR -95 167 56 288 362 66 37 chr2 148293057 148293328 -104963255 + L2 LINE L2 2472 2750 -564 243 382 47 39 chr2 148293449 148293703 -104962880 + L2 LINE L2 2823 3078 -194 2439 141 34 21 chr2 148293857 148294282 -104962301 + MSTB1 LTR MaLR 1 374 -1 305 306 53 24 chr2 148294482 148294652 -104961931 - MER5B DNA MER1_type 0 178 4 405 0 0 0 chr2 148295240 148295285 -104961298 + (CA)n Simple_repeat Simple_repeat 2 46 0 294 29 0 0 chr2 148297870 148297897 -104958686 + (CA)n Simple_repeat Simple_repeat 1 62 0 294 29 0 0 chr2 148297897 148297932 -104958651 + (CA)n Simple_repeat Simple_repeat 2 36 0 463 275 114 21 chr2 148300099 148300292 -104956291 + MIR SINE MIR 30 240 -22 1367 191 113 29 chr2 148301481 148301827 -104954756 - THE1C LTR MaLR 0 375 1 9322 141 28 36 chr2 148301828 148303419 -104953164 - THE1C-int LTR MaLR -1 1579 3 1820 139 57 38 chr2 148303421 148303789 -104952794 - THE1C LTR MaLR 0 375 1 372 257 37 0 chr2 148304461 148304570 -104952013 - MER112 DNA MER1_type -143 117 5 548 235 0 9 chr2 148304878 148304993 -104951590 - MER81 DNA DNA 0 114 1 2306 197 5 0 chr2 148305990 148306406 -104950177 + MER47B DNA MER2_type 1 418 0 303 28 0 0 chr2 148309416 148309452 -104947131 + (TC)n Simple_repeat Simple_repeat 1 36 0 270 0 0 0 chr2 148309451 148309481 -104947102 + (CA)n Simple_repeat Simple_repeat 1 30 0 * 862 203 68 21 chr2 148309650 148309887 -104946696 - L1MD3 LINE L1 -18 7977 7730 322 344 28 42 chr2 148309933 148310181 -104946402 + MIR SINE MIR 2 254 -8 3498 177 48 8 chr2 148313178 148313884 -104942699 + MER50 LTR ERV1 1 734 0 1489 180 41 51 chr2 148313963 148314357 -104942226 - MLT1B LTR MaLR 0 390 1 245 200 192 32 chr2 148314476 148314601 -104941982 - MLT1C LTR MaLR -123 344 200 2687 146 15 51 chr2 148315380 148315992 -104940591 + MER4E LTR ERV1 1 779 0 773 262 138 38 chr2 148316521 148316861 -104939722 + MLT1C LTR MaLR 91 464 -3 25 0 0 0 chr2 148319008 148319033 -104937550 + AT_rich Low_complexity Low_complexity 1 25 0 369 276 54 59 chr2 148319377 148319580 -104937003 + L1ME4a LINE L1 5719 5920 -201 1792 131 3 66 chr2 148320133 148320438 -104936145 - AluSx SINE Alu -26 286 1 25 31 0 0 chr2 148320440 148320472 -104936111 + AT_rich Low_complexity Low_complexity 1 32 0 724 283 165 37 chr2 148320771 148321153 -104935430 - LTR33 LTR ERVL -90 431 1 26 30 0 0 chr2 148323216 148323249 -104933334 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr2 148323638 148323668 -104932915 + AT_rich Low_complexity Low_complexity 1 30 0 2030 184 16 5 chr2 148324710 148325096 -104931487 + MLT1B LTR MaLR 1 390 0 2137 192 3 8 chr2 148325659 148326045 -104930538 - MSTB LTR MaLR -6 420 37 5664 202 73 50 chr2 148326059 148327601 -104928982 - MSTB-int LTR MaLR 0 1580 3 2247 148 22 65 chr2 148327603 148328048 -104928535 - MSTB LTR MaLR 0 426 1 853 137 72 7 chr2 148328287 148328440 -104928143 - MER34 LTR ERV1 0 542 380 886 274 44 4 chr2 148328480 148328754 -104927829 - MER34 LTR ERV1 -257 285 1 22 35 0 0 chr2 148329009 148329038 -104927545 + AT_rich Low_complexity Low_complexity 1 29 0 2108 179 59 12 chr2 148329762 148330171 -104926412 + MSTA LTR MaLR 1 428 0 529 253 32 6 chr2 148330225 148330383 -104926200 + MER103 DNA DNA 3 164 -2 886 234 10 5 chr2 148330818 148331023 -104925560 + MER96B DNA MER1_type? 18 223 -194 24 0 0 0 chr2 148331156 148331180 -104925403 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 148332637 148332658 -104923925 + AT_rich Low_complexity Low_complexity 1 21 0 2366 74 3 3 chr2 148333335 148333644 -104922939 + AluY SINE Alu 1 309 -2 516 236 0 31 chr2 148334267 148334394 -104922189 - MLT1B LTR MaLR -45 345 223 878 229 150 23 chr2 148334440 148334601 -104921982 + MLT1B LTR MaLR 1 140 -250 324 0 0 0 chr2 148334601 148334637 -104921946 + (TC)n Simple_repeat Simple_repeat 2 37 0 878 229 150 23 chr2 148334637 148334781 -104921802 + MLT1B LTR MaLR 140 345 -45 225 0 0 0 chr2 148334892 148334917 -104921666 + (A)n Simple_repeat Simple_repeat 1 25 0 911 240 96 14 chr2 148335817 148336109 -104920474 + HsTC2 DNA Tc2 3 318 -1580 1907 264 75 47 chr2 148336506 148338678 -104917905 + L1MEc LINE L1 1833 4092 -2123 2034 134 16 32 chr2 148338787 148339167 -104917416 - THE1C LTR MaLR -1 374 1 588 296 66 40 chr2 148339211 148339437 -104917146 + MIR SINE MIR 30 261 -1 285 316 88 7 chr2 148339901 148340037 -104916546 - MIR SINE MIR -84 178 32 25 0 0 0 chr2 148340536 148340561 -104916022 + AT_rich Low_complexity Low_complexity 1 25 0 237 347 66 0 chr2 148340772 148340893 -104915690 - L1MC/D LINE L1 -2196 5612 5484 1296 191 0 4 chr2 148340940 148341186 -104915397 - AluJo SINE Alu -27 285 41 629 233 86 0 chr2 148341386 148341549 -104915034 - MER97a DNA MER1_type? -717 177 1 351 348 104 30 chr2 148341965 148342434 -104914149 - L1MC/D LINE L1 -758 5388 4885 1384 215 33 63 chr2 148342831 148343226 -104913357 + L1MEc LINE L1 4091 4473 -1742 * 4282 184 56 17 chr2 148343219 148344186 -104912397 + L1MB3 LINE L1 4700 5738 -514 1943 153 3 3 chr2 148344186 148344486 -104912097 + AluSc SINE Alu 1 300 -9 4282 184 56 17 chr2 148344486 148345019 -104911564 + L1MB3 LINE L1 5738 6249 -3 * 14114 206 13 9 chr2 148345015 148345906 -104910677 + L1PB1 LINE L1 1553 2439 -3712 507 45 0 0 chr2 148345906 148345972 -104910611 + (TC)n Simple_repeat Simple_repeat 2 67 0 288 0 0 0 chr2 148345971 148346003 -104910580 + (TA)n Simple_repeat Simple_repeat 1 32 0 * 14114 206 13 9 chr2 148345972 148348069 -104908514 + L1PB1 LINE L1 2439 4532 -1619 1990 144 33 28 chr2 148348069 148348430 -104908153 + THE1B LTR MaLR 1 363 -1 14114 206 13 9 chr2 148348430 148349696 -104906887 + L1PB1 LINE L1 4532 5791 -360 429 188 0 0 chr2 148349702 148349787 -104906796 + (TG)n Simple_repeat Simple_repeat 2 86 0 210 171 0 0 chr2 148349787 148349828 -104906755 + (CATA)n Simple_repeat Simple_repeat 2 42 0 2519 99 3 0 chr2 148349833 148350195 -104906388 + L1PB1 LINE L1 5789 6151 0 578 321 58 7 chr2 148350214 148350488 -104906095 + MLT1F1 LTR MaLR 18 305 -262 240 255 128 67 chr2 148350526 148350675 -104905908 + MLT1F1 LTR MaLR 436 593 0 270 363 144 15 chr2 148350681 148350882 -104905701 + MIR SINE MIR 20 246 -16 22 0 0 0 chr2 148351250 148351272 -104905311 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 148353001 148353023 -104903560 + AT_rich Low_complexity Low_complexity 1 22 0 2176 110 3 0 chr2 148354304 148354605 -104901978 + AluSx SINE Alu 3 304 -8 204 232 14 0 chr2 148355473 148355542 -104901041 + (TA)n Simple_repeat Simple_repeat 1 70 0 518 308 143 32 chr2 148355666 148356140 -104900443 - MLT1L LTR MaLR -2 613 87 1656 215 5 24 chr2 148356185 148356557 -104900026 - MLT1A1 LTR MaLR 0 365 1 658 277 70 37 chr2 148356594 148357037 -104899546 - LTR33 LTR ERVL -1 520 1 401 231 149 62 chr2 148357193 148357574 -104899009 - L1MC/D LINE L1 -485 5636 5256 461 279 103 104 chr2 148357597 148358209 -104898374 - L1MC/D LINE L1 -920 5226 4614 2524 53 0 10 chr2 148358209 148358513 -104898070 + AluY SINE Alu 1 301 -10 461 279 103 104 chr2 148358513 148358916 -104897667 - L1MC/D LINE L1 -1532 4614 4212 489 73 0 0 chr2 148358923 148358991 -104897592 - LTR1B LTR ERV1 -2 824 757 3269 157 16 16 chr2 148358992 148359566 -104897017 - LTR1B LTR ERV1 -252 574 1 294 29 0 0 chr2 148359636 148359671 -104896912 + (TC)n Simple_repeat Simple_repeat 2 36 0 22 35 0 0 chr2 148359777 148359806 -104896777 + AT_rich Low_complexity Low_complexity 1 29 0 204 125 0 0 chr2 148359919 148359951 -104896632 + (CAT)n Simple_repeat Simple_repeat 1 32 0 699 142 35 0 chr2 148359973 148360086 -104896497 + FLAM_C SINE Alu 8 124 -19 272 299 31 0 chr2 148360128 148360225 -104896358 - MIR SINE MIR -38 224 125 196 250 21 0 chr2 148361070 148361118 -104895465 + L2 LINE L2 3262 3310 -3 1999 100 44 0 chr2 148362064 148362398 -104894185 + AluSx SINE Alu 1 346 0 243 219 14 0 chr2 148363477 148363550 -104893033 + L1MA7 LINE L1 6218 6291 0 744 262 74 22 chr2 148364194 148364598 -104891985 + L1MC4 LINE L1 7217 7641 -401 183 220 0 0 chr2 148364667 148364717 -104891866 + CT-rich Low_complexity Low_complexity 2 51 0 302 269 142 7 chr2 148364734 148364875 -104891708 + L1MC4 LINE L1 7680 7839 -203 * 898 234 47 71 chr2 148364873 148365168 -104891415 + L1MD2 LINE L1 4889 5173 -973 1750 169 7 7 chr2 148365168 148365475 -104891108 + AluSx SINE Alu 1 307 -5 898 234 47 71 chr2 148365475 148365603 -104890980 + L1MD2 LINE L1 5173 5302 -844 448 287 71 39 chr2 148365613 148366461 -104890122 + L1MD2 LINE L1 5354 6261 -98 1920 83 0 0 chr2 148366461 148366701 -104889882 + AluSg/x SINE Alu 66 305 -7 448 287 71 39 chr2 148366701 148366787 -104889796 + L1MD2 LINE L1 6261 6343 -16 207 0 0 0 chr2 148366903 148366926 -104889657 + (CA)n Simple_repeat Simple_repeat 1 23 0 246 355 84 6 chr2 148367004 148367339 -104889244 + L1ME1 LINE L1 4085 4445 -1701 23 0 0 0 chr2 148367377 148367400 -104889183 + AT_rich Low_complexity Low_complexity 1 23 0 1632 218 65 11 chr2 148367428 148367782 -104888801 + MLT1A2 LTR MaLR 2 374 0 359 322 55 55 chr2 148367833 148368090 -104888493 + L1ME1 LINE L1 4601 4856 -1290 3778 157 8 80 chr2 148368090 148368936 -104887647 + LTR1 LTR ERV1 1 785 0 359 322 55 55 chr2 148368936 148369199 -104887384 + L1ME1 LINE L1 4856 5127 -1019 261 188 35 12 chr2 148369290 148369375 -104887208 + L1ME1 LINE L1 5254 5340 -2468 * 1507 268 52 8 chr2 148369371 148369890 -104886693 + L1ME1 LINE L1 5622 6163 -3 271 150 67 0 chr2 148370053 148370113 -104886470 - L1ME LINE L1 -474 5688 5625 188 366 146 0 chr2 148370291 148370455 -104886128 - MIR SINE MIR -55 207 20 246 280 16 86 chr2 148370715 148370901 -104885682 + MER110A LTR ERV1 272 444 -24 787 144 7 43 chr2 148372090 148372229 -104884354 + AluJo SINE Alu 3 136 -176 1724 175 7 13 chr2 148372229 148372538 -104884045 + AluJb SINE Alu 1 307 -5 483 314 36 81 chr2 148372546 148372851 -104883732 + MER110-int LTR ERV1 3772 4046 -601 2893 97 54 7 chr2 148372851 148373275 -104883308 - MLT2A1 LTR ERVL 0 444 1 483 314 36 81 chr2 148373275 148373489 -104883094 + MER110-int LTR ERV1 4046 4268 -379 371 190 35 90 chr2 148373532 148373659 -104882924 - L1MC/D LINE L1 -582 5584 5469 251 169 62 0 chr2 148373887 148373952 -104882631 - L1MC/D LINE L1 -913 5431 5363 3462 176 25 19 chr2 148373953 148374588 -104881995 - MER44D DNA MER2_type -1 604 94 413 257 115 0 chr2 148374588 148374736 -104881847 - L1MC/D LINE L1 -1241 4905 4741 245 29 0 29 chr2 148375688 148375723 -104880860 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 272 237 17 0 chr2 148376254 148376313 -104880270 + CT-rich Low_complexity Low_complexity 4 63 0 308 94 19 0 chr2 148376491 148376544 -104880039 + (CA)n Simple_repeat Simple_repeat 1 54 0 2296 75 0 0 chr2 148377704 148377984 -104878599 + AluSx SINE Alu 1 280 -32 307 0 47 0 chr2 148377987 148378030 -104878553 + (TAA)n Simple_repeat Simple_repeat 2 46 0 2012 148 19 38 chr2 148378476 148378847 -104877736 + THE1B LTR MaLR 1 364 0 475 234 112 43 chr2 148379010 148379198 -104877385 + L2 LINE L2 3113 3313 0 308 250 23 11 chr2 148379676 148379764 -104876819 - MLT1I LTR MaLR -3 406 318 251 252 110 47 chr2 148379873 148380000 -104876583 - MLT1J2 LTR MaLR -238 212 78 1082 78 0 0 chr2 148380139 148380267 -104876316 + AluSc SINE Alu 6 133 -176 1575 158 0 23 chr2 148380267 148380526 -104876057 + AluSq SINE Alu 1 253 -60 795 303 68 33 chr2 148380823 148381160 -104875423 - LTR16A LTR ERVL 0 450 102 46 54 0 0 chr2 148381304 148381378 -104875205 + AT_rich Low_complexity Low_complexity 1 74 0 200 100 25 0 chr2 148382265 148382305 -104874278 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 1882 128 0 31 chr2 148383030 148383353 -104873230 - AluSx SINE Alu 0 316 3 456 67 0 0 chr2 148383371 148383431 -104873152 + (TG)n Simple_repeat Simple_repeat 2 61 0 187 362 0 0 chr2 148383535 148383593 -104872990 - L2 LINE L2 -8 3264 3207 21 0 0 0 chr2 148383850 148383871 -104872712 + AT_rich Low_complexity Low_complexity 1 21 0 298 306 111 28 chr2 148385124 148385268 -104871315 + MIR3 SINE MIR 43 198 -10 180 77 0 0 chr2 148385290 148385316 -104871267 + (ATTG)n Simple_repeat Simple_repeat 1 26 0 1627 161 4 25 chr2 148385327 148385607 -104870976 - AluJo SINE Alu -38 274 1 590 285 105 53 chr2 148386052 148386375 -104870208 - MER102b DNA MER1_type -1 340 1 2235 107 0 3 chr2 148386778 148387076 -104869507 - AluSg SINE Alu -13 297 1 1576 213 0 22 chr2 148387297 148387612 -104868971 - AluJb SINE Alu -1 311 4 1414 254 91 35 chr2 148388419 148388903 -104867680 - MLT1G LTR MaLR -2 588 78 246 371 27 43 chr2 148388923 148389179 -104867404 + L2 LINE L2 1695 1946 -1368 206 254 17 34 chr2 148389181 148389240 -104867343 - MIR SINE MIR 0 262 205 27 62 0 0 chr2 148389279 148389327 -104867256 + AT_rich Low_complexity Low_complexity 1 48 0 2189 183 15 25 chr2 148389539 148389944 -104866639 + MSTB LTR MaLR 26 426 0 8076 208 21 7 chr2 148389944 148391571 -104865012 + MSTB-int LTR MaLR 1 1651 0 2315 158 48 36 chr2 148391573 148391992 -104864591 + MSTB LTR MaLR 3 426 0 10579 209 65 9 chr2 148392272 148394576 -104862007 + L1M2a LINE L1 1 2440 -4728 183 206 54 76 chr2 148444760 148444852 -104811731 - MER5C DNA MER1_type -41 283 194 484 180 20 0 chr2 148445709 148445809 -104810774 + MSTC LTR MaLR 321 422 -6 277 349 55 23 chr2 148445829 148446047 -104810536 + MLT1L LTR MaLR 389 613 -2 1612 197 27 0 chr2 148448255 148448555 -104808028 - AluJo SINE Alu 0 312 5 5933 140 42 20 chr2 148448593 148449600 -104806983 + L1P3 LINE L1 10 1038 -5423 1629 197 40 25 chr2 148449870 148449941 -104806642 - L1PB4 LINE L1 -103 6053 5985 2225 98 0 0 chr2 148449941 148450227 -104806356 - AluSc SINE Alu -19 290 5 1629 197 40 25 chr2 148450227 148450556 -104806027 - L1PB4 LINE L1 -171 5985 5647 333 321 96 34 chr2 148450766 148450975 -104805608 - MIR SINE MIR -30 232 11 703 209 87 32 chr2 148451022 148451299 -104805284 - MER2 DNA MER2_type -10 335 1 278 211 0 35 chr2 148452825 148452882 -104803701 + MER21B LTR ERV1 17 71 -792 398 282 48 0 chr2 148452981 148453105 -104803478 + MER21B LTR ERV1 98 227 -636 1333 248 75 28 chr2 148453126 148453610 -104802973 + MER21B LTR ERV1 383 815 -48 584 139 62 0 chr2 148453845 148453974 -104802609 - L1MC3 LINE L1 0 7785 7649 1999 279 71 37 chr2 148453983 148455063 -104801520 - L1MEc LINE L1 -5230 1166 50 28 0 0 0 chr2 148455077 148455105 -104801478 + AT_rich Low_complexity Low_complexity 1 28 0 2725 134 19 0 chr2 148455219 148455637 -104800946 - MSTA LTR MaLR 0 428 3 2021 135 13 7 chr2 148455793 148456096 -104800487 - AluSx SINE Alu -7 305 1 2087 113 6 49 chr2 148456502 148456829 -104799754 + AluSq SINE Alu 1 313 0 306 106 0 0 chr2 148458321 148458368 -104798215 + (CA)n Simple_repeat Simple_repeat 2 48 0 1454 161 12 0 chr2 148458593 148458835 -104797748 - AluSx SINE Alu -67 245 1 409 338 97 38 chr2 148459140 148459734 -104796849 - L2 LINE L2 -4 3309 2676 199 365 39 28 chr2 148459819 148459997 -104796586 + L2 LINE L2 2443 2622 -692 181 317 40 69 chr2 148460206 148460307 -104796276 - MIR SINE MIR -56 206 109 246 191 24 36 chr2 148461413 148461497 -104795086 - LTR37A LTR ERV1 -14 412 330 1613 198 50 13 chr2 148461498 148461908 -104794675 + MLT1B LTR MaLR 1 458 -9 297 250 28 37 chr2 148461921 148462029 -104794554 - LTR37A LTR ERV1 -99 327 221 189 0 0 0 chr2 148462986 148463007 -104793576 + (A)n Simple_repeat Simple_repeat 1 21 0 1649 221 14 6 chr2 148463682 148464039 -104792544 - MLT1A1 LTR MaLR -2 363 4 398 286 19 56 chr2 148464625 148464786 -104791797 + L1 LINE L1 769 923 -5380 2343 247 72 9 chr2 148464788 148465809 -104790774 + L1 LINE L1 802 1787 -4516 243 192 39 26 chr2 148465820 148465898 -104790685 + L1 LINE L1 5340 5418 -964 7837 211 27 11 chr2 148465952 148467859 -104788724 + L1MB1 LINE L1 3435 5370 -776 2762 193 24 11 chr2 148467898 148468441 -104788142 + L1MB1 LINE L1 5478 6027 -141 911 61 53 0 chr2 148468541 148468672 -104787911 - L1P LINE L1 -900 5246 5109 626 260 25 0 chr2 148468684 148468884 -104787699 - L1M4 LINE L1 -743 5403 5199 225 359 62 7 chr2 148468975 148469120 -104787463 + L2 LINE L2 2621 2773 -541 26 30 0 0 chr2 148470605 148470638 -104785945 + AT_rich Low_complexity Low_complexity 1 33 0 334 321 73 28 chr2 148470638 148470856 -104785727 - MIR SINE MIR -12 250 23 609 234 253 34 chr2 148471020 148471285 -104785298 + MSTD LTR MaLR 1 323 -73 21 36 0 0 chr2 148471584 148471612 -104784971 + AT_rich Low_complexity Low_complexity 1 28 0 59 0 0 0 chr2 148471631 148471690 -104784893 + AT_rich Low_complexity Low_complexity 1 59 0 2306 309 32 10 chr2 148471707 148472483 -104784100 + L1MDb LINE L1 141 788 -5755 2769 219 44 25 chr2 148472499 148473563 -104783020 + L1MDb LINE L1 797 1874 -4666 230 86 43 71 chr2 148473565 148473635 -104782948 + (TTAA)n Simple_repeat Simple_repeat 4 71 0 2876 238 43 68 chr2 148473735 148473982 -104782601 + L1MDb LINE L1 2112 2364 -4176 2355 53 0 0 chr2 148473982 148474300 -104782283 + AluY SINE Alu 1 318 0 2876 238 43 68 chr2 148474300 148474527 -104782056 + L1MDb LINE L1 2364 2595 -3945 1806 219 58 72 chr2 148474527 148475097 -104781486 + MER68 LTR ERV1 1 562 0 2876 238 43 68 chr2 148475097 148476409 -104780174 + L1MDb LINE L1 2595 3871 -2669 1178 266 80 0 chr2 148476440 148476613 -104779970 + L1MD2 LINE L1 5965 6123 -236 237 33 0 0 chr2 148476613 148476643 -104779940 + (CA)n Simple_repeat Simple_repeat 1 30 0 1178 266 80 0 chr2 148476643 148476830 -104779753 + L1MD2 LINE L1 6123 6354 -5 270 311 104 27 chr2 148476877 148477060 -104779523 - HAL1 LINE L1 -920 1587 1391 759 242 88 42 chr2 148477165 148477425 -104779158 + LTR27 LTR ERV1 365 636 0 412 246 85 15 chr2 148477545 148477675 -104778908 - MIR SINE MIR -13 249 111 853 219 0 0 chr2 148477916 148478067 -104778516 - FAM SINE Alu -23 162 12 664 181 72 0 chr2 148478714 148478880 -104777703 + MER53 DNA DNA 1 178 -11 6292 120 67 22 chr2 148480049 148481167 -104775416 + Tigger3b DNA MER2_type 1 1168 -63 321 106 0 0 chr2 148481247 148481294 -104775289 - MADE1 DNA Mariner -1 79 33 22 0 0 0 chr2 148483210 148483232 -104773351 + AT_rich Low_complexity Low_complexity 1 22 0 2271 140 20 90 chr2 148483342 148483857 -104772726 + MER51C LTR ERV1 1 459 -181 886 222 27 0 chr2 148484758 148484943 -104771640 + MER58A DNA MER1_type 19 208 -16 271 339 6 12 chr2 148485320 148485488 -104771095 + CT-rich Low_complexity Low_complexity 2 168 0 3536 134 17 8 chr2 148485832 148486655 -104769928 - HERVH LTR ERV1 -6637 1076 1 1983 81 45 6 chr2 148486665 148487038 -104769545 - LTR7 LTR ERV1 -10 440 1 1339 283 92 41 chr2 148487141 148488174 -104768409 + L1MCc LINE L1 787 1874 -4887 1244 259 63 17 chr2 148488390 148488977 -104767606 + L1MCc LINE L1 3008 3621 -3320 1877 171 107 11 chr2 148488981 148489622 -104766961 - L1M2 LINE L1 -685 5615 4913 227 203 0 34 chr2 148489611 148489670 -104766913 + L1MD3 LINE L1 7637 7693 -302 * 3094 198 20 64 chr2 148489896 148490704 -104765879 - L1MB8 LINE L1 -2 6176 5405 * 7310 23 1 2 chr2 148490690 148491549 -104765034 - L1PA3 LINE L1 0 6155 5298 825 339 92 37 chr2 148494047 148494859 -104761724 + L2 LINE L2 1890 2746 -568 27 29 0 0 chr2 148495099 148495133 -104761450 + AT_rich Low_complexity Low_complexity 1 34 0 221 288 102 34 chr2 148495137 148495255 -104761328 + L2 LINE L2 3180 3305 -8 596 300 70 13 chr2 148495425 148495652 -104760931 + MIR SINE MIR 16 255 -7 234 265 10 31 chr2 148496989 148497087 -104759496 + L1ME LINE L1 5552 5647 -474 1741 160 23 102 chr2 148497196 148497322 -104759261 - L1MC3 LINE L1 -68 7717 7583 2050 138 0 0 chr2 148497322 148497612 -104758971 + AluSx SINE Alu 4 293 -19 1741 160 23 102 chr2 148497612 148497928 -104758655 - L1MC3 LINE L1 -202 7583 7310 1441 220 19 66 chr2 148497935 148498311 -104758272 + MLT1A2 LTR MaLR 1 358 -16 1965 193 41 28 chr2 148498311 148498497 -104758086 + MSTB1 LTR MaLR 1 183 -249 2045 129 3 0 chr2 148498497 148498791 -104757792 + AluSg SINE Alu 1 295 -15 1965 193 41 28 chr2 148498791 148499038 -104757545 + MSTB1 LTR MaLR 183 432 0 540 215 15 31 chr2 148499040 148499170 -104757413 - L1MC3 LINE L1 -502 7283 7156 2195 239 75 30 chr2 148499332 148499972 -104756611 + MER21B LTR ERV1 115 783 -80 1598 166 3 75 chr2 148500391 148500710 -104755873 + AluJb SINE Alu 1 296 -16 1586 189 128 128 chr2 148500752 148501578 -104755005 + LTR1B LTR ERV1 1 826 0 21 36 0 0 chr2 148501822 148501850 -104754733 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr2 148502067 148502102 -104754481 + AT_rich Low_complexity Low_complexity 1 35 0 2094 89 7 7 chr2 148502460 148502848 -104753735 - LTR7 LTR ERV1 -11 439 1 2678 112 11 33 chr2 148502848 148503303 -104753280 - HERVH LTR ERV1 0 7713 7269 * 7119 165 39 38 chr2 148503292 148504810 -104751773 - HERVH LTR ERV1 -2702 5011 3492 947 140 7 0 chr2 148504800 148504950 -104751633 - HERVH LTR ERV1 -4423 3290 3140 * 8027 127 9 13 chr2 148504920 148506190 -104750393 - HERVH LTR ERV1 -4709 3004 1740 377 292 53 75 chr2 148506770 148506996 -104749587 - HAL1 LINE L1 -2277 230 10 1396 219 125 6 chr2 148507942 148508294 -104748289 - MSTD LTR MaLR 0 396 3 30 0 0 0 chr2 148508457 148508487 -104748096 + AT_rich Low_complexity Low_complexity 1 30 0 334 272 41 31 chr2 148508816 148509011 -104747572 + L1MD2 LINE L1 6141 6337 -22 2257 39 46 4 chr2 148509221 148509502 -104747081 - AluY SINE Alu -18 293 1 25 31 0 0 chr2 148509559 148509591 -104746992 + AT_rich Low_complexity Low_complexity 1 32 0 2348 97 0 0 chr2 148510224 148510524 -104746059 - AluSg SINE Alu -10 300 1 534 312 115 20 chr2 148510536 148510789 -104745794 - MLT1J2 LTR MaLR -4 446 170 21 0 0 0 chr2 148510796 148510817 -104745766 + AT_rich Low_complexity Low_complexity 1 21 0 618 159 23 61 chr2 148510870 148511002 -104745581 - MER45A DNA AcHobo 0 178 52 2020 208 71 7 chr2 148511076 148511538 -104745045 - MLT1D LTR MaLR -13 492 1 224 111 56 14 chr2 148512098 148512170 -104744413 + A-rich Low_complexity Low_complexity 1 75 0 481 316 46 46 chr2 148512744 148513048 -104743535 - MLT1I LTR MaLR -38 371 68 2231 142 42 70 chr2 148513359 148513705 -104742878 + MER47B DNA MER2_type 1 334 -1989 2124 122 10 0 chr2 148513705 148514000 -104742583 - AluSq SINE Alu -11 302 5 2231 142 42 70 chr2 148514000 148514082 -104742501 + MER47B DNA MER2_type 334 417 -1 513 273 79 91 chr2 148514185 148514602 -104741981 + MLT1J LTR MaLR 82 493 -18 540 0 0 0 chr2 148516823 148516883 -104739700 + (GGAA)n Simple_repeat Simple_repeat 1 60 0 1500 250 25 8 chr2 148519664 148520024 -104736559 + L1M3d LINE L1 2 367 -5524 4022 135 89 106 chr2 148520024 148521423 -104735160 + pTR5 LTR ERV1 743 2438 0 544 324 5 0 chr2 148521426 148521601 -104734982 + L1M3d LINE L1 205 510 -5381 262 200 0 0 chr2 148522933 148522978 -104733605 + L1 LINE L1 4859 4903 -1243 815 275 37 44 chr2 148524080 148524375 -104732208 + L2 LINE L2 3012 3304 -9 290 287 136 21 chr2 148524453 148524829 -104731754 - L1MEc LINE L1 -3594 2621 2203 436 291 93 37 chr2 148524835 148525103 -104731480 - L1MEc LINE L1 -4160 2236 1954 368 276 43 73 chr2 148525187 148525635 -104730948 - L1MEc LINE L1 -869 1707 1247 2009 126 11 0 chr2 148525635 148525964 -104730619 - AluSx SINE Alu 0 332 1 368 276 43 73 chr2 148525964 148526238 -104730345 - L1MEc LINE L1 -1329 1247 966 25 31 0 0 chr2 148526286 148526318 -104730265 + AT_rich Low_complexity Low_complexity 1 32 0 201 74 0 0 chr2 148527034 148527061 -104729522 + (TG)n Simple_repeat Simple_repeat 2 28 0 23 33 0 0 chr2 148528233 148528263 -104728320 + AT_rich Low_complexity Low_complexity 1 30 0 21 82 0 0 chr2 148529036 148529085 -104727498 + AT_rich Low_complexity Low_complexity 1 49 0 358 333 83 0 chr2 148530890 148531034 -104725549 + MIR SINE MIR 37 192 -70 2803 133 26 2 chr2 148531038 148531499 -104725084 + MER51C LTR ERV1 1 452 -188 5004 206 107 90 chr2 148531499 148533214 -104723369 + MER52A LTR ERV1 1 1744 -11 1249 102 5 20 chr2 148533226 148533422 -104723161 + MER51C LTR ERV1 448 640 0 202 321 0 0 chr2 148533422 148533478 -104723105 + MIR SINE MIR 191 246 -16 25 51 0 0 chr2 148533619 148533658 -104722925 + AT_rich Low_complexity Low_complexity 1 39 0 310 264 103 11 chr2 148533986 148534073 -104722510 + L2 LINE L2 3148 3242 -30 1014 48 0 0 chr2 148534111 148534236 -104722347 - L1PA3 LINE L1 -6 6149 6025 25 51 0 0 chr2 148536292 148536331 -104720252 + AT_rich Low_complexity Low_complexity 1 39 0 23 0 0 0 chr2 148536859 148536882 -104719701 + AT_rich Low_complexity Low_complexity 1 23 0 31 68 0 0 chr2 148538876 148538935 -104717648 + AT_rich Low_complexity Low_complexity 1 59 0 319 287 53 47 chr2 148539216 148539297 -104717286 - MIR SINE MIR -6 256 172 2400 143 3 3 chr2 148539297 148539661 -104716922 + THE1B LTR MaLR 1 364 0 319 287 53 47 chr2 148539661 148539729 -104716854 - MIR SINE MIR -90 172 106 372 253 11 0 chr2 148541982 148542073 -104714510 - L1MA4A LINE L1 -23 6280 6189 1368 188 13 13 chr2 148542078 148542376 -104714207 - L1MA4A LINE L1 -182 6121 5824 2033 114 49 7 chr2 148542378 148542685 -104713898 - HSMAR1 DNA Mariner -889 398 79 220 234 31 16 chr2 148545738 148545802 -104710781 + CT-rich Low_complexity Low_complexity 1 65 0 1053 258 102 32 chr2 148546264 148546787 -104709796 - MLT1G LTR MaLR -2 588 3 307 243 100 129 chr2 148546848 148547058 -104709525 - MLT1G-int LTR MaLR -61 1310 1107 261 0 0 0 chr2 148547287 148547316 -104709267 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1067 316 52 7 chr2 148547803 148548246 -104708337 + LTR16B LTR ERVL 2 464 0 1990 279 49 13 chr2 148548255 148548889 -104707694 + HERV16 LTR ERVL 2181 2837 -2159 857 361 53 43 chr2 148549100 148549816 -104706767 + HERV16 LTR ERVL 3612 4344 -1420 2056 139 0 0 chr2 148549816 148550119 -104706464 - AluSg SINE Alu -7 303 1 857 361 53 43 chr2 148550119 148550431 -104706152 + HERV16 LTR ERVL 4344 4651 -1113 410 309 72 58 chr2 148550506 148550989 -104705594 + HERV16 LTR ERVL 4507 4996 0 432 293 26 0 chr2 148550999 148551115 -104705468 + LTR16B LTR ERVL 2 120 -344 429 286 52 19 chr2 148551130 148551343 -104705240 + LTR16B LTR ERVL 234 453 -11 285 351 31 19 chr2 148551438 148551697 -104704886 - MLT1G-int LTR MaLR -840 531 270 332 269 31 15 chr2 148551907 148552037 -104704546 - MLT1G LTR MaLR -458 132 1 277 233 67 44 chr2 148553482 148553572 -104703011 - L2 LINE L2 0 3313 3222 932 312 61 33 chr2 148553598 148553992 -104702591 - L2 LINE L2 -371 2943 2539 276 103 0 0 chr2 148554305 148554344 -104702239 - Charlie1 DNA MER1_type 0 2761 2723 2188 143 22 6 chr2 148554348 148554704 -104701879 + THE1B LTR MaLR 1 362 -2 389 208 0 58 chr2 148554722 148554842 -104701741 - LTR41 LTR ERVL -7 766 654 236 350 12 0 chr2 148554924 148555004 -104701579 - LTR41 LTR ERVL -183 590 510 559 258 16 0 chr2 148555401 148555583 -104701000 - LTR41 LTR ERVL -588 185 1 4129 202 86 30 chr2 148555583 148556018 -104700565 - Charlie1 DNA MER1_type -56 2705 2296 2702 129 28 67 chr2 148556018 148556528 -104700055 - LTR2B LTR ERV1 0 490 1 4129 202 86 30 chr2 148556528 148557283 -104699300 - Charlie1 DNA MER1_type -465 2296 1449 219 218 8 150 chr2 148557398 148557497 -104699086 + L2 LINE L2 3200 3277 -36 2793 167 61 81 chr2 148557497 148558202 -104698381 - LTR8 LTR ERV1 0 691 1 219 218 8 150 chr2 148558202 148558235 -104698348 + L2 LINE L2 3277 3313 0 287 305 45 39 chr2 148558416 148558570 -104698013 + L2 LINE L2 3159 3313 0 579 310 95 16 chr2 148558930 148559172 -104697411 - MIR SINE MIR -1 261 1 419 184 20 43 chr2 148559641 148560112 -104696471 + (TA)n Simple_repeat Simple_repeat 1 460 0 2326 168 51 25 chr2 148561547 148562341 -104694242 - L1M1 LINE L1 -645 5658 4840 472 288 0 0 chr2 148562348 148562480 -104694103 - L1M2 LINE L1 -6706 143 12 3672 36 7 2 chr2 148562595 148563044 -104693539 + L1PA5 LINE L1 5703 6153 -1 217 44 0 67 chr2 148563049 148563094 -104693489 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 323 306 50 71 chr2 148563544 148563881 -104692702 - MLT1I LTR MaLR -6 403 74 248 262 182 12 chr2 148565098 148565221 -104691362 - MIR SINE MIR -68 140 2 24 32 0 0 chr2 148565758 148565789 -104690794 + AT_rich Low_complexity Low_complexity 1 31 0 450 338 56 45 chr2 148566209 148566475 -104690108 + L3 LINE CR1 1275 1543 -34 22 0 0 0 chr2 148566567 148566589 -104689994 + AT_rich Low_complexity Low_complexity 1 22 0 692 243 86 64 chr2 148566795 148567265 -104689318 + MLT1H1 LTR MaLR 27 595 0 26 82 0 0 chr2 148568433 148568494 -104688089 + AT_rich Low_complexity Low_complexity 1 61 0 22 0 0 0 chr2 148571547 148571569 -104685014 + AT_rich Low_complexity Low_complexity 1 22 0 193 241 169 24 chr2 148572008 148572091 -104684492 + MER5A DNA MER1_type 95 189 0 22 70 0 0 chr2 148572399 148572442 -104684141 + AT_rich Low_complexity Low_complexity 1 43 0 42091 38 22 2 chr2 148573049 148579081 -104677502 - L1PA2 LINE L1 0 6155 1 7818 170 13 25 chr2 148579259 148580818 -104675765 + L1P LINE L1 782 2321 -3825 2256 87 0 6 chr2 148580820 148581131 -104675452 + L1PA8 LINE L1 5861 6169 -3 31 44 0 0 chr2 148583279 148583324 -104673259 + AT_rich Low_complexity Low_complexity 1 45 0 1738 171 4 0 chr2 148583545 148583825 -104672758 - AluJb SINE Alu -31 281 1 22 35 0 0 chr2 148584497 148584526 -104672057 + AT_rich Low_complexity Low_complexity 1 29 0 301 295 58 51 chr2 148584641 148584797 -104671786 - MIR SINE MIR -57 205 49 1805 196 33 0 chr2 148585805 148586142 -104670441 + MER7A DNA MER2_type 1 346 0 358 254 67 15 chr2 148586644 148586778 -104669805 + MIR SINE MIR 66 206 -56 1282 199 24 7 chr2 148587683 148587980 -104668603 - MER33 DNA MER1_type -22 302 1 2267 85 24 0 chr2 148588636 148588929 -104667654 - AluY SINE Alu -7 304 5 25 0 0 0 chr2 148588989 148589014 -104667569 + AT_rich Low_complexity Low_complexity 1 25 0 759 182 104 7 chr2 148589140 148589294 -104667289 - AluJb SINE Alu -12 300 132 1334 231 36 66 chr2 148589953 148590391 -104666192 + LTR40c LTR ERVL 28 452 -13 297 290 85 43 chr2 148590683 148591011 -104665572 - L1M4 LINE L1 -1927 4219 3878 22 0 0 0 chr2 148591096 148591118 -104665465 + AT_rich Low_complexity Low_complexity 1 22 0 673 300 57 4 chr2 148591167 148591394 -104665189 + LTR40b LTR ERVL 190 428 -34 2398 134 13 8 chr2 148592198 148592571 -104664012 - THE1C LTR MaLR 0 375 1 291 364 40 13 chr2 148592633 148592861 -104663722 - HAL1 LINE L1 -769 1738 1505 1060 210 77 4 chr2 148593360 148593593 -104662990 - MLT1D LTR MaLR -129 376 127 279 224 149 0 chr2 148593595 148593662 -104662921 + MLT1B LTR MaLR 1 77 -313 1071 185 10 10 chr2 148593717 148593912 -104662671 - MER2 DNA MER2_type -148 197 3 1028 257 23 40 chr2 148593912 148594233 -104662350 + MLT1B LTR MaLR 72 386 -4 683 231 0 8 chr2 148594237 148594367 -104662216 - MLT1D LTR MaLR -376 129 1 329 292 155 25 chr2 148595178 148595455 -104661128 + L1ME4a LINE L1 5574 5886 -235 2362 61 7 3 chr2 148597264 148597558 -104659025 - AluY SINE Alu -16 295 1 343 161 12 12 chr2 148598606 148598687 -104657896 + GA-rich Low_complexity Low_complexity 2 82 0 951 0 0 0 chr2 148599268 148599374 -104657209 - AluY SINE Alu -205 106 1 2094 108 0 0 chr2 148599870 148600148 -104656435 + AluSc SINE Alu 14 291 -18 225 0 0 0 chr2 148600673 148600698 -104655885 + (TG)n Simple_repeat Simple_repeat 1 25 0 206 350 87 87 chr2 148601174 148601440 -104655143 + L2 LINE L2 2700 2965 -349 277 341 11 0 chr2 148601535 148601623 -104654960 + L2 LINE L2 3220 3308 -5 1520 220 67 34 chr2 148601799 148602235 -104654348 + MLT1C LTR MaLR 18 467 0 272 167 0 0 chr2 148602430 148602472 -104654111 - 5S rRNA rRNA -79 42 1 286 263 91 31 chr2 148603169 148603322 -104653261 + LTR48B LTR ERV1 1 176 -366 1100 208 76 42 chr2 148603354 148603710 -104652873 + MLT1C LTR MaLR 1 368 -99 959 170 88 61 chr2 148603777 148604071 -104652512 + MER39 LTR ERV1 406 707 0 950 226 34 15 chr2 148605280 148605360 -104651223 - AluJo SINE Alu -104 208 131 213 39 0 0 chr2 148605360 148605386 -104651197 + (TTG)n Simple_repeat Simple_repeat 2 27 0 950 226 34 15 chr2 148605386 148605509 -104651074 - AluJo SINE Alu -181 131 1 851 149 155 0 chr2 148605509 148605683 -104650900 - MLT2D LTR ERVL -213 201 1 325 301 67 10 chr2 148607037 148607230 -104649353 - Charlie2a DNA MER1_type -34 2828 2625 973 276 77 59 chr2 148607278 148607759 -104648824 - Charlie2a DNA MER1_type -303 2559 2059 1594 161 28 0 chr2 148607759 148608050 -104648533 - L1PB4 LINE L1 0 6156 5858 973 276 77 59 chr2 148608050 148608312 -104648271 - Charlie2a DNA MER1_type -803 2059 1803 302 169 15 0 chr2 148608338 148608403 -104648180 + CT-rich Low_complexity Low_complexity 2 67 0 1105 282 35 32 chr2 148608533 148609097 -104647486 - Charlie2a DNA MER1_type -1177 1685 1120 524 39 0 51 chr2 148609121 148609257 -104647326 + L1PA3 LINE L1 6079 6155 0 1870 134 0 11 chr2 148609345 148609649 -104646934 + AluSx SINE Alu 1 301 0 1650 150 50 9 chr2 148609657 148609977 -104646606 + L1PA16 LINE L1 5834 6166 0 2662 254 65 14 chr2 148609977 148610292 -104646291 + L1MC/D LINE L1 2814 3112 -4696 333 0 0 0 chr2 148610292 148610329 -104646254 + (TAAAA)n Simple_repeat Simple_repeat 3 39 0 2662 254 65 14 chr2 148610329 148611164 -104645419 + L1MC/D LINE L1 3112 5745 -2063 21 36 0 0 chr2 148611370 148611398 -104645185 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr2 148611506 148611536 -104645047 + AT_rich Low_complexity Low_complexity 1 30 0 1278 289 87 40 chr2 148611718 148611861 -104644722 - Charlie2a DNA MER1_type -1850 1012 877 1953 141 3 3 chr2 148611861 148612165 -104644418 + AluSq SINE Alu 1 304 -9 1278 289 87 40 chr2 148612165 148612827 -104643756 - Charlie2a DNA MER1_type -1985 877 169 444 312 169 17 chr2 148615805 148616036 -104640547 - MLT1L LTR MaLR 0 615 350 767 253 0 26 chr2 148616382 148616572 -104640011 + MER5A DNA MER1_type 2 186 -3 193 185 123 46 chr2 148616956 148617021 -104639562 - MIR SINE MIR -7 255 186 2069 123 0 3 chr2 148617965 148618265 -104638318 + AluSg SINE Alu 1 299 -11 273 230 30 27 chr2 148618585 148618726 -104637857 - HsTC2 DNA Tc2 -38 1860 3 250 407 7 0 chr2 148619224 148619369 -104637214 + L2 LINE L2 2911 3056 -216 194 264 0 11 chr2 148619410 148619501 -104637082 + (TA)n Simple_repeat Simple_repeat 2 91 0 23 78 0 0 chr2 148619513 148619564 -104637019 + AT_rich Low_complexity Low_complexity 1 51 0 34 65 0 0 chr2 148619730 148619792 -104636791 + AT_rich Low_complexity Low_complexity 1 62 0 2030 189 53 35 chr2 148619822 148620255 -104636328 - MLT2B3 LTR ERVL -39 515 75 21 57 0 0 chr2 148620344 148620379 -104636204 + AT_rich Low_complexity Low_complexity 1 35 0 245 130 14 101 chr2 148620384 148620453 -104636130 + HSMAR1 DNA Mariner 1 63 -1224 315 146 0 0 chr2 148620485 148620540 -104636043 + (TG)n Simple_repeat Simple_repeat 2 56 0 351 78 0 0 chr2 148620699 148620750 -104635833 + (TG)n Simple_repeat Simple_repeat 2 52 0 230 345 73 18 chr2 148620752 148620862 -104635721 + L2 LINE L2 3155 3270 -2 7567 92 22 14 chr2 148621060 148622941 -104633642 - L1PA7 LINE L1 -3 6151 4241 345 347 79 18 chr2 148623611 148624003 -104632580 - HAL1 LINE L1 -983 1524 1109 214 125 36 36 chr2 148624123 148624179 -104632404 + (TAGA)n Simple_repeat Simple_repeat 3 58 0 2142 113 0 0 chr2 148624541 148624852 -104631731 - AluSx SINE Alu 0 312 1 23 33 0 0 chr2 148625015 148625045 -104631538 + AT_rich Low_complexity Low_complexity 1 30 0 245 206 32 0 chr2 148625268 148625331 -104631252 + (TTCA)n Simple_repeat Simple_repeat 1 65 0 1879 132 33 10 chr2 148626382 148626685 -104629898 + AluSx SINE Alu 1 310 -2 226 259 19 0 chr2 148627396 148627450 -104629133 - MLT1K LTR MaLR -17 571 517 191 379 23 0 chr2 148628922 148629009 -104627574 + L3 LINE CR1 357 445 -1132 256 398 35 0 chr2 148629637 148629750 -104626833 + L3 LINE CR1 1006 1122 -455 551 314 60 67 chr2 148629764 148630063 -104626520 + L3 LINE CR1 1256 1552 -25 868 90 0 15 chr2 148630204 148630338 -104626245 + L1MA5 LINE L1 6169 6300 0 22 0 0 0 chr2 148630340 148630362 -104626221 + AT_rich Low_complexity Low_complexity 1 22 0 2238 116 0 0 chr2 148631603 148631913 -104624670 - AluSx SINE Alu -2 310 1 198 350 82 0 chr2 148632042 148632139 -104624444 - MIR SINE MIR -112 150 46 1476 145 217 22 chr2 148632622 148633037 -104623546 - LTR54B LTR ERV1 -2 496 1 267 203 0 0 chr2 148636454 148636518 -104620065 + GA-rich Low_complexity Low_complexity 2 65 0 195 241 35 17 chr2 148637374 148637432 -104619151 + MIR SINE MIR 82 140 -122 345 326 44 22 chr2 148637678 148637813 -104618770 - L2 LINE L2 -1 3312 3175 188 404 43 0 chr2 148639186 148639280 -104617303 + MIR SINE MIR 1 98 -164 317 246 54 54 chr2 148639458 148639588 -104616995 + MARNA DNA Mariner 413 542 -44 330 26 0 0 chr2 148640198 148640786 -104615797 + (TG)n Simple_repeat Simple_repeat 1 588 0 2800 152 23 29 chr2 148640259 148640747 -104615836 - L1MA5A LINE L1 -6 6291 5805 330 26 0 0 chr2 148640747 148640786 -104615797 + (TG)n Simple_repeat Simple_repeat 2 40 0 2800 152 23 29 chr2 148640786 148640855 -104615728 - L1MA5A LINE L1 -492 5805 5737 196 346 10 20 chr2 148641113 148641214 -104615369 + L2 LINE L2 2832 2931 -382 236 89 0 22 chr2 148641257 148641302 -104615281 + (GA)n Simple_repeat Simple_repeat 2 45 0 1444 206 85 12 chr2 148641302 148641632 -104614951 - MLT2D LTR ERVL -48 366 13 371 194 77 158 chr2 148641756 148641928 -104614655 + L2 LINE L2 3121 3277 -36 2320 164 60 91 chr2 148641928 148642428 -104614155 + LTR9 LTR ERV1 1 480 -132 1900 92 0 65 chr2 148642428 148642722 -104613861 - AluSx SINE Alu 0 312 38 2320 164 60 91 chr2 148642722 148642851 -104613732 + LTR9 LTR ERV1 480 611 -1 371 194 77 158 chr2 148642851 148642874 -104613709 + L2 LINE L2 3277 3300 -13 1698 55 5 0 chr2 148643164 148643383 -104613200 + L1PA7 LINE L1 5935 6154 0 596 340 56 53 chr2 148643406 148643838 -104612745 - MLT1K LTR MaLR -41 547 115 4475 197 32 7 chr2 148643875 148644818 -104611765 - L1MC3 LINE L1 0 7785 6820 387 0 0 0 chr2 148645265 148645308 -104611275 + (T)n Simple_repeat Simple_repeat 1 43 0 231 275 0 12 chr2 148645624 148645704 -104610879 - L1MEc LINE L1 -5064 1246 1168 301 272 79 93 chr2 148645736 148646089 -104610494 - L1MEc LINE L1 -5056 1063 716 342 325 62 19 chr2 148646722 148646882 -104609701 + L1ME4a LINE L1 5653 5819 -302 24 0 0 0 chr2 148647089 148647113 -104609470 + AT_rich Low_complexity Low_complexity 1 24 0 240 292 108 15 chr2 148647117 148647247 -104609336 + L1ME4a LINE L1 5974 6115 -6 23 0 0 0 chr2 148648604 148648627 -104607956 + AT_rich Low_complexity Low_complexity 1 23 0 2762 263 25 27 chr2 148648826 148649664 -104606919 + L1PBa LINE L1 3 838 -6025 767 254 130 43 chr2 148649670 148650063 -104606520 + MER50 LTR ERV1 10 436 -298 6344 148 79 31 chr2 148650071 148650834 -104605749 + L1PBa LINE L1 1028 1753 -5109 3925 185 25 52 chr2 148650834 148651830 -104604753 - LTR5 LTR ERVK 0 969 1 6344 148 79 31 chr2 148651830 148653244 -104603339 + L1PBa LINE L1 1753 3332 -3530 9793 205 10 21 chr2 148653619 148655897 -104600686 + L1 LINE L1 3330 5582 -1280 809 167 0 0 chr2 148655909 148656047 -104600536 - Tigger6 DNA MER2_type -1422 175 38 1135 237 0 47 chr2 148656068 148656368 -104600215 + Tigger6a DNA MER2_type 164 449 -634 236 170 113 0 chr2 148656441 148656494 -104600089 - MIR SINE MIR -4 258 200 2239 199 98 18 chr2 148656532 148657105 -104599478 + Tigger6a DNA MER2_type 465 1083 0 11511 31 1 36 chr2 148657624 148659054 -104597529 + SVA Other Other 1 1380 -6 461 318 35 23 chr2 148659066 148659324 -104597259 + L1ME LINE L1 5509 5769 -352 798 223 120 50 chr2 148659519 148659819 -104596764 - MER5C DNA MER1_type 0 324 4 480 294 129 10 chr2 148659932 148660133 -104596450 - MIR SINE MIR -10 252 28 297 51 0 0 chr2 148660540 148660579 -104596004 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 476 274 7 14 chr2 148660781 148661055 -104595528 + (TATG)n Simple_repeat Simple_repeat 1 272 0 312 290 0 0 chr2 148661072 148661179 -104595404 + (TG)n Simple_repeat Simple_repeat 1 107 0 22 0 0 0 chr2 148661945 148661967 -104594616 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 148663086 148663107 -104593476 + AT_rich Low_complexity Low_complexity 1 21 0 244 233 27 14 chr2 148663358 148663431 -104593152 - MIR SINE MIR -124 138 65 1372 196 96 0 chr2 148663440 148663710 -104592873 - AluJb SINE Alu -11 301 6 266 337 51 0 chr2 148663837 148663935 -104592648 + MER91C DNA MER1_type 35 137 -3 1926 143 88 69 chr2 148664418 148664792 -104591791 + MSTA LTR MaLR 1 385 -43 2480 65 7 0 chr2 148664792 148665100 -104591483 - AluY SINE Alu 0 311 2 1926 143 88 69 chr2 148665100 148665145 -104591438 + MSTA LTR MaLR 385 428 0 449 122 24 0 chr2 148665585 148665667 -104590916 + G-rich Low_complexity Low_complexity 2 85 0 203 217 22 0 chr2 148665672 148665718 -104590865 + GA-rich Low_complexity Low_complexity 1 47 0 526 287 31 20 chr2 148665790 148665985 -104590598 + L2 LINE L2 3117 3313 0 1845 158 0 0 chr2 148669071 148669363 -104587220 + AluSx SINE Alu 1 292 -20 195 336 129 26 chr2 148669524 148669640 -104586943 + L2 LINE L2 3145 3272 0 25 0 0 0 chr2 148669847 148669872 -104586711 + AT_rich Low_complexity Low_complexity 1 25 0 1786 205 91 65 chr2 148670128 148670756 -104585827 - LTR9B LTR ERV1 0 644 1 887 201 0 12 chr2 148670758 148670922 -104585661 + FRAM SINE Alu 5 166 0 239 319 71 9 chr2 148671408 148671521 -104585062 + MIR SINE MIR 37 156 -106 424 343 108 5 chr2 148671783 148671996 -104584587 + MIR SINE MIR 28 262 0 769 218 78 0 chr2 148672333 148672512 -104584071 - MER105 DNA DNA -6 198 6 11594 94 12 40 chr2 148672517 148674380 -104582203 - L1PA7 LINE L1 -2450 3696 1886 11784 89 1 1 chr2 148674380 148676819 -104579764 + L1PA7 LINE L1 3724 6148 -6 319 272 29 15 chr2 148676856 148676992 -104579591 + (TCTA)n Simple_repeat Simple_repeat 1 138 0 894 278 32 29 chr2 148677368 148677710 -104578873 - Tigger8 DNA MER2_type -66 600 258 1598 238 78 80 chr2 148678002 148678607 -104577976 - MLT1E2 LTR MaLR 0 626 1 285 344 134 31 chr2 148681388 148681679 -104574904 + L2 LINE L2 2433 2753 -561 679 289 42 8 chr2 148682205 148682444 -104574139 - MLT1L LTR MaLR 0 615 369 250 290 32 11 chr2 148682531 148682624 -104573959 - MLT1L LTR MaLR -377 238 144 419 262 39 0 chr2 148682764 148682867 -104573716 - MER5A DNA MER1_type -80 109 3 229 386 18 44 chr2 148683212 148683326 -104573257 + L2 LINE L2 3067 3177 -95 31 26 0 0 chr2 148683597 148683635 -104572948 + AT_rich Low_complexity Low_complexity 1 38 0 681 219 14 20 chr2 148683860 148684006 -104572577 - MLT1E LTR MaLR -438 155 11 33 0 0 0 chr2 148684197 148684230 -104572353 + AT_rich Low_complexity Low_complexity 1 33 0 209 325 61 61 chr2 148684664 148684895 -104571688 - L2 LINE L2 -811 2503 2273 510 297 92 22 chr2 148685117 148685346 -104571237 + MIR SINE MIR 4 248 -14 400 199 144 72 chr2 148686186 148686367 -104570216 - L1MEc LINE L1 -5320 1076 883 786 413 25 50 chr2 148686368 148686852 -104569731 - L1MD2 LINE L1 -1 6358 5887 265 200 22 22 chr2 148686853 148686943 -104569640 + (TA)n Simple_repeat Simple_repeat 2 91 0 762 330 65 32 chr2 148689203 148689676 -104566907 + LTR33 LTR ERVL 12 500 -21 22 35 0 0 chr2 148689931 148689960 -104566623 + AT_rich Low_complexity Low_complexity 1 29 0 756 250 83 4 chr2 148690353 148690617 -104565966 + L1MDa LINE L1 1636 1920 -4620 43455 43 4 3 chr2 148690622 148696770 -104559813 + L1PA4 LINE L1 2 6161 0 1326 265 38 14 chr2 148696770 148697192 -104559391 + L1MDa LINE L1 1935 2366 -4174 283 122 20 0 chr2 148697192 148697241 -104559342 - MADE1 DNA Mariner -1 79 30 283 250 83 0 chr2 148697815 148697923 -104558660 - MIR SINE MIR -50 212 96 392 331 28 7 chr2 148698385 148698527 -104558056 + MIR SINE MIR 9 153 -109 1712 130 0 97 chr2 148698654 148698984 -104557599 - AluY SINE Alu -13 298 1 24 53 0 0 chr2 148699526 148699564 -104557019 + AT_rich Low_complexity Low_complexity 1 38 0 5028 128 4 4 chr2 148700286 148701059 -104555524 - L1PB3 LINE L1 -2 6152 5380 2566 118 5 3 chr2 148701328 148701702 -104554881 - THE1C LTR MaLR 0 375 1 1069 254 43 29 chr2 148702101 148702448 -104554135 + L1ME1 LINE L1 5810 6161 -5 2309 90 3 3 chr2 148702472 148702771 -104553812 + AluSp SINE Alu 1 299 -14 319 226 16 0 chr2 148703707 148703769 -104552814 + LTR40a LTR ERVL 1 63 -456 1912 167 75 27 chr2 148703795 148704328 -104552255 - MLT2A2 LTR ERVL 0 554 1 1677 226 20 54 chr2 148704329 148704775 -104551808 + LTR40a LTR ERVL 89 519 0 1359 219 32 83 chr2 148705401 148705812 -104550771 + MLT1B LTR MaLR 1 390 0 2713 39 0 0 chr2 148705993 148706304 -104550279 - AluY SINE Alu 0 311 1 835 160 0 0 chr2 148706584 148706709 -104549874 - FRAM SINE Alu -19 157 33 26 50 0 0 chr2 148706818 148706858 -104549725 + AT_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr2 148706944 148706965 -104549618 + AT_rich Low_complexity Low_complexity 1 21 0 2068 142 3 3 chr2 148707192 148707502 -104549081 - AluSg SINE Alu 0 310 1 1383 190 3 80 chr2 148708506 148708833 -104547750 + AluJo SINE Alu 3 304 -8 319 320 83 46 chr2 148709578 148709905 -104546678 - L1MC/D LINE L1 -626 5529 5266 1509 127 4 16 chr2 148709923 148709999 -104546584 + AluSx SINE Alu 61 136 -176 1770 97 15 103 chr2 148709999 148710329 -104546254 + AluSc SINE Alu 1 301 -8 1509 127 4 16 chr2 148710329 148710496 -104546087 + AluSx SINE Alu 136 301 -11 537 341 70 38 chr2 148710496 148710646 -104545937 - L1MC/D LINE L1 -1817 4329 4185 1852 157 36 41 chr2 148710646 148711010 -104545573 - THE1B LTR MaLR -1 363 2 537 341 70 38 chr2 148711010 148711328 -104545255 - L1MC/D LINE L1 -1961 4185 3846 2591 174 53 58 chr2 148711378 148711981 -104544602 - LTR9 LTR ERV1 -12 600 1 1029 308 106 27 chr2 148712056 148712897 -104543686 - L1MC/D LINE L1 -2377 3769 2863 231 88 0 0 chr2 148714246 148714280 -104542303 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 1211 267 119 6 chr2 148714416 148714952 -104541631 + L1ME LINE L1 5202 5796 -368 330 228 63 13 chr2 148715086 148715165 -104541418 - MER45B DNA AcHobo -3 1037 955 * 1666 230 27 17 chr2 148715162 148715575 -104541008 - MER45B DNA AcHobo -219 821 405 1122 237 4 17 chr2 148715578 148715810 -104540773 - MER45B DNA AcHobo -810 230 2 502 41 27 0 chr2 148715820 148715893 -104540690 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 1999 136 147 5 chr2 148715947 148716322 -104540261 + MSTA LTR MaLR 1 428 0 1731 235 41 32 chr2 148716339 148716832 -104539751 - L2 LINE L2 -743 2571 2075 266 298 53 0 chr2 148716842 148716936 -104539647 + MIR SINE MIR 90 188 -74 689 118 0 10 chr2 148718039 148718141 -104538442 + L1M1 LINE L1 1164 1264 -6301 770 245 7 0 chr2 148718301 148718452 -104538131 + L1M1 LINE L1 1650 1801 -5765 325 257 73 52 chr2 148718476 148718612 -104537971 - LTR33A LTR ERVL -111 412 274 441 281 39 45 chr2 148718657 148718835 -104537748 - MER5A DNA MER1_type 0 189 13 717 313 72 66 chr2 148719944 148720011 -104536572 - L3 LINE CR1 -286 1291 1226 1672 181 51 3 chr2 148720011 148720304 -104536279 - AluJo SINE Alu -5 307 1 717 313 72 66 chr2 148720304 148720738 -104535845 - L3 LINE CR1 -351 1226 787 2098 176 21 19 chr2 148720972 148721405 -104535178 + L1MA5 LINE L1 5834 6267 -33 29 47 0 0 chr2 148721406 148721449 -104535134 + AT_rich Low_complexity Low_complexity 1 43 0 2005 164 26 17 chr2 148721605 148722020 -104534563 + L1MB3 LINE L1 5753 6171 -12 4021 161 14 6 chr2 148722043 148722896 -104533687 + L1PA16 LINE L1 5068 5925 -241 622 71 0 0 chr2 148722896 148722980 -104533603 + Alu SINE Alu 222 305 -5 481 182 27 0 chr2 148723040 148723150 -104533433 + L1PA16 LINE L1 6052 6164 -2 1326 207 0 32 chr2 148723185 148723470 -104533113 + AluJo SINE Alu 11 286 -26 255 160 60 0 chr2 148723609 148723659 -104532924 - Charlie1 DNA MER1_type -6 2755 2703 1304 251 108 31 chr2 148723696 148724402 -104532181 + L1ME1 LINE L1 2714 3473 -2673 9777 186 23 47 chr2 148724403 148729138 -104527445 + L1MA4A LINE L1 787 5635 -1370 1839 180 7 0 chr2 148729138 148729444 -104527139 + AluSx SINE Alu 1 308 -4 1729 189 117 8 chr2 148729447 148729833 -104526750 - MSTA LTR MaLR 0 428 1 9777 186 23 47 chr2 148729833 148730751 -104525832 + L1MA4A LINE L1 5637 6999 -6 1218 253 75 36 chr2 148730763 148731324 -104525259 + L1ME1 LINE L1 3829 4411 -1735 6145 109 40 38 chr2 148731495 148732573 -104524010 - L1MA2 LINE L1 -7 7716 6637 2096 150 34 29 chr2 148732575 148732956 -104523627 + MSTA LTR MaLR 4 386 -42 9301 178 14 8 chr2 148732969 148734596 -104521987 + MSTA-int LTR MaLR 15 1651 0 2070 194 39 0 chr2 148734596 148735008 -104521575 + MSTA LTR MaLR 1 428 0 18562 180 21 39 chr2 148735015 148735947 -104520636 - L1MA2 LINE L1 -941 6624 5677 324 0 0 0 chr2 148735947 148735983 -104520600 + (TG)n Simple_repeat Simple_repeat 1 36 0 18562 180 21 39 chr2 148735983 148739108 -104517475 - L1MA2 LINE L1 -1888 5677 2498 1381 222 48 0 chr2 148739108 148739378 -104517205 - AluJb SINE Alu -27 285 3 18562 180 21 39 chr2 148739378 148740768 -104515815 - L1MA2 LINE L1 -5067 2498 1311 3473 102 18 8 chr2 148740768 148741277 -104515306 - MER75 DNA T2_type 0 514 1 18562 180 21 39 chr2 148741277 148742555 -104514028 - L1MA2 LINE L1 -6254 1311 12 726 252 82 36 chr2 148742557 148743160 -104513423 + L1ME1 LINE L1 4488 5062 -1104 1963 131 3 16 chr2 148743160 148743473 -104513110 - AluSq SINE Alu -4 309 1 726 252 82 36 chr2 148743473 148744381 -104512202 + L1ME1 LINE L1 5062 6161 -5 1962 218 76 18 chr2 148744412 148745014 -104511569 - Charlie1 DNA MER1_type -76 2685 2049 258 328 92 0 chr2 148745802 148745921 -104510662 + L2 LINE L2 3143 3272 0 478 351 31 18 chr2 148746267 148746492 -104510091 + MIR SINE MIR 14 241 -21 26 0 0 0 chr2 148747633 148747659 -104508924 + AT_rich Low_complexity Low_complexity 1 26 0 892 232 82 16 chr2 148748599 148748848 -104507735 + MLT2D LTR ERVL 83 492 -62 403 291 35 0 chr2 148748851 148749023 -104507560 + L1ME3A LINE L1 4215 4392 -1754 567 313 131 2 chr2 148749053 148749487 -104507096 + L1ME3A LINE L1 4457 4946 -1200 26 0 0 0 chr2 148749526 148749552 -104507031 + AT_rich Low_complexity Low_complexity 1 26 0 614 221 64 12 chr2 148749569 148749620 -104506963 - MER3 DNA MER1_type -19 190 143 1264 186 0 118 chr2 148749620 148749959 -104506624 + AluJb SINE Alu 3 301 -11 614 221 64 12 chr2 148749959 148750079 -104506504 - MER3 DNA MER1_type -66 143 10 420 289 46 34 chr2 148750088 148750438 -104506145 + L1ME3A LINE L1 5036 5389 -757 22 0 0 0 chr2 148750450 148750472 -104506111 + AT_rich Low_complexity Low_complexity 1 22 0 1108 301 32 20 chr2 148750472 148750973 -104505610 + L1ME3A LINE L1 5659 6165 -5 281 73 146 0 chr2 148751051 148751106 -104505477 + L1MB1 LINE L1 6105 6167 -1 21 36 0 0 chr2 148751106 148751134 -104505449 + AT_rich Low_complexity Low_complexity 1 28 0 17050 185 29 11 chr2 148751152 148755695 -104500888 + L1PA14 LINE L1 1535 6152 -9 26 0 0 0 chr2 148755836 148755862 -104500721 + AT_rich Low_complexity Low_complexity 1 26 0 246 247 39 0 chr2 148756187 148756264 -104500319 + MER116 DNA Mariner 1 80 0 393 270 49 20 chr2 148756418 148756558 -104500025 + MIR SINE MIR 1 141 -67 24 0 0 0 chr2 148756577 148756601 -104499982 + AT_rich Low_complexity Low_complexity 1 24 0 462 309 80 36 chr2 148757211 148757574 -104499009 - L1MC4a LINE L1 -1905 5903 5525 556 293 60 85 chr2 148759846 148760246 -104496337 - L2 LINE L2 -2 3311 2922 2029 84 53 7 chr2 148760253 148760538 -104496045 + AluSg SINE Alu 1 298 -12 281 282 41 67 chr2 148761156 148761351 -104495232 + MLT1L LTR MaLR 371 560 -55 1381 211 3 33 chr2 148761353 148761656 -104494927 - AluJo SINE Alu -18 294 1 1207 201 0 90 chr2 148763363 148763686 -104492897 - AluJo SINE Alu -18 294 1 1861 168 111 13 chr2 148764383 148764771 -104491812 - MSTB LTR MaLR 0 426 1 2156 114 7 3 chr2 148764820 148765158 -104491425 + AluSg SINE Alu 3 341 0 264 352 16 24 chr2 148765400 148765525 -104491058 - L2 LINE L2 0 3313 3190 1749 238 41 45 chr2 148765607 148766190 -104490393 - L1MD2 LINE L1 -36 6323 5743 216 258 65 0 chr2 148766265 148766327 -104490256 + L2 LINE L2 3248 3313 0 209 217 54 98 chr2 148766534 148766626 -104489957 - MIR SINE MIR -62 200 113 240 283 0 0 chr2 148766949 148767009 -104489574 + (CATATA)n Simple_repeat Simple_repeat 3 62 0 223 204 56 0 chr2 148767260 148767314 -104489269 + (CATATA)n Simple_repeat Simple_repeat 4 60 0 223 383 66 22 chr2 148767369 148767552 -104489031 - MIR SINE MIR -70 192 2 2930 158 42 11 chr2 148768478 148769021 -104487562 - L1PA16 LINE L1 -5 6161 5602 42069 36 24 1 chr2 148769030 148775047 -104481536 - L1PA3 LINE L1 0 6155 1 2233 137 27 3 chr2 148775054 148775538 -104481045 - L1PA16 LINE L1 -546 5620 5122 568 194 19 153 chr2 148775823 148776091 -104480492 - MER112 DNA MER1_type -3 257 26 290 265 53 112 chr2 148776711 148776881 -104479702 + LTR33A LTR ERVL 1 160 -363 840 243 22 0 chr2 148778861 148779046 -104477537 + MER5A DNA MER1_type 1 189 0 12984 129 38 71 chr2 148780213 148780543 -104476040 - Tigger1 DNA MER2_type 0 2418 2079 518 191 11 0 chr2 148780543 148780637 -104475946 + AluJb SINE Alu 186 280 -32 206 0 0 65 chr2 148780643 148780674 -104475909 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 12984 129 38 71 chr2 148780674 148782729 -104473854 - Tigger1 DNA MER2_type -344 2074 14 383 290 210 11 chr2 148783317 148783493 -104473090 - L2 LINE L2 -22 3291 3081 759 318 98 0 chr2 148783534 148783798 -104472785 - L2 LINE L2 -527 2787 2498 257 317 10 10 chr2 148784105 148784209 -104472374 + HsTC2 DNA Tc2 1 104 -1794 903 267 238 14 chr2 148784246 148784755 -104471828 + HsTC2 DNA Tc2 1274 1896 -2 460 356 35 15 chr2 148785308 148785569 -104471014 + L2 LINE L2 3047 3312 -1 355 198 0 18 chr2 148785745 148785856 -104470727 + (TA)n Simple_repeat Simple_repeat 1 109 0 22 0 0 0 chr2 148786351 148786373 -104470210 + AT_rich Low_complexity Low_complexity 1 22 0 251 272 225 12 chr2 148786888 148787061 -104469522 - MIR SINE MIR -48 214 5 32 0 0 0 chr2 148787523 148787555 -104469028 + AT_rich Low_complexity Low_complexity 1 32 0 1615 216 148 18 chr2 148787669 148788114 -104468469 + MLT1D LTR MaLR 1 503 -2 1183 296 107 29 chr2 148788203 148788800 -104467783 + L1ME1 LINE L1 307 950 -5657 * 2877 194 51 26 chr2 148788791 148789277 -104467306 + L1MD1 LINE L1 5429 5936 -306 2329 78 0 0 chr2 148789277 148789571 -104467012 + AluY SINE Alu 1 294 -17 2877 194 51 26 chr2 148789571 148789709 -104466874 + L1MD1 LINE L1 5936 6069 -173 859 198 0 0 chr2 148790009 148790186 -104466397 + L1MD1 LINE L1 6066 6242 0 1075 241 81 16 chr2 148790237 148790648 -104465935 + L1ME1 LINE L1 1995 2490 -3980 12128 143 13 8 chr2 148790702 148793557 -104463026 - L1PA10 LINE L1 -5 6163 3280 2794 218 81 24 chr2 148793569 148793604 -104462979 + L1ME1 LINE L1 5480 5512 -934 247 47 0 47 chr2 148793604 148793647 -104462936 + (TTTTA)n Simple_repeat Simple_repeat 2 42 0 1512 196 15 8 chr2 148793649 148793914 -104462669 - AluJo SINE Alu -45 267 1 2794 218 81 24 chr2 148793914 148794737 -104461846 + L1ME1 LINE L1 5512 6377 -69 803 236 71 25 chr2 148794776 148795056 -104461527 + L1ME2 LINE L1 4346 4638 -1508 237 297 0 14 chr2 148795059 148795133 -104461450 + L1ME2 LINE L1 4913 4985 -1161 1073 178 43 0 chr2 148795136 148795367 -104461216 + L1MB3 LINE L1 5940 6180 -3 392 214 20 10 chr2 148795759 148795857 -104460726 + L1MA10 LINE L1 6196 6294 -40 1836 188 0 0 chr2 148795874 148796177 -104460406 - AluJb SINE Alu -9 303 1 251 170 0 0 chr2 148796177 148796230 -104460353 + L1MA10 LINE L1 6280 6332 -2 2276 254 87 23 chr2 148796240 148797320 -104459263 + L1ME2 LINE L1 4996 6151 -13 974 259 32 26 chr2 148797337 148797623 -104458960 + MLT2D LTR ERVL 77 359 -55 752 110 19 7 chr2 148797623 148797777 -104458806 + (TAGA)n Simple_repeat Simple_repeat 2 157 0 246 224 0 0 chr2 148797788 148797837 -104458746 + MLT2D LTR ERVL 366 414 0 363 308 140 53 chr2 148798731 148799091 -104457492 + L2 LINE L2 2682 3067 -246 333 335 21 42 chr2 148799481 148799717 -104456866 - L1ME LINE L1 -442 5679 5449 31 26 0 0 chr2 148800446 148800484 -104456099 + AT_rich Low_complexity Low_complexity 1 38 0 313 238 109 68 chr2 148801863 148802010 -104454573 - L1ME LINE L1 -2392 5416 5264 255 274 80 18 chr2 148803624 148803737 -104452846 + MIR SINE MIR 100 219 -43 1354 147 101 27 chr2 148805421 148805679 -104450904 + AluJo SINE Alu 3 279 -33 21 57 0 0 chr2 148805699 148805734 -104450849 + AT_rich Low_complexity Low_complexity 1 35 0 513 332 174 17 chr2 148805951 148806518 -104450065 - L2 LINE L2 -8 3305 2651 216 86 0 0 chr2 148806721 148806756 -104449827 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1719 172 0 10 chr2 148807720 148808010 -104448573 + AluJb SINE Alu 1 287 -25 2006 109 3 67 chr2 148808922 148809252 -104447331 - AluSc SINE Alu 0 309 1 270 0 0 0 chr2 148809446 148809476 -104447107 + (TG)n Simple_repeat Simple_repeat 1 30 0 212 0 36 0 chr2 148809475 148809503 -104447080 + (GA)n Simple_repeat Simple_repeat 1 29 0 * 189 107 0 0 chr2 148809502 148809530 -104447053 + (TG)n Simple_repeat Simple_repeat 2 29 0 * 198 0 0 0 chr2 148809777 148809799 -104446784 + (CAAAA)n Simple_repeat Simple_repeat 4 25 0 2400 160 34 24 chr2 148809939 148810444 -104446139 + L1MA7 LINE L1 5776 6285 -6 307 335 61 18 chr2 148810886 148811050 -104445533 - MIR SINE MIR -71 191 21 21 57 0 0 chr2 148811244 148811279 -104445304 + AT_rich Low_complexity Low_complexity 1 35 0 207 394 101 11 chr2 148811361 148811480 -104445103 - MIR SINE MIR -55 207 63 924 220 134 35 chr2 148811480 148811581 -104445002 + MER2 DNA MER2_type 1 91 -253 1638 159 33 4 chr2 148811581 148811851 -104444732 + AluJb SINE Alu 19 296 -16 924 220 134 35 chr2 148811851 148812062 -104444521 + MER2 DNA MER2_type 91 344 0 207 394 101 11 chr2 148812062 148812130 -104444453 - MIR SINE MIR -199 63 3 681 292 114 35 chr2 148812322 148812811 -104443772 + MER34 LTR ERV1 10 537 -5 27 49 0 0 chr2 148812816 148812857 -104443726 + AT_rich Low_complexity Low_complexity 1 41 0 24 32 0 0 chr2 148814936 148814967 -104441616 + AT_rich Low_complexity Low_complexity 1 31 0 1451 194 31 28 chr2 148815356 148815644 -104440939 + AluJo SINE Alu 1 289 -23 2271 99 0 10 chr2 148818774 148819087 -104437496 + AluY SINE Alu 1 310 -1 1955 142 3 13 chr2 148819754 148820056 -104436527 + AluJo SINE Alu 1 299 -13 197 83 28 0 chr2 148820910 148820946 -104435637 + (GA)n Simple_repeat Simple_repeat 2 38 0 237 204 0 0 chr2 148821922 148821966 -104434617 + CT-rich Low_complexity Low_complexity 3 46 0 1508 212 0 4 chr2 148822578 148822852 -104433731 - AluJb SINE Alu -39 273 1 279 325 96 22 chr2 148823174 148823540 -104433043 - L1ME LINE L1 -519 5647 5255 421 281 82 23 chr2 148823552 148823723 -104432860 + MIR SINE MIR 66 246 -16 6548 32 2 0 chr2 148823746 148824562 -104432021 - L1PA4 LINE L1 0 6155 5338 23 0 0 0 chr2 148825778 148825801 -104430782 + AT_rich Low_complexity Low_complexity 1 23 0 2142 125 3 3 chr2 148826477 148826773 -104429810 - AluSx SINE Alu -16 296 1 25 0 0 0 chr2 148826839 148826864 -104429719 + AT_rich Low_complexity Low_complexity 1 25 0 2020 101 3 57 chr2 148827252 148827617 -104428966 - AluSg SINE Alu 0 350 2 961 213 20 0 chr2 148827817 148828014 -104428569 - MLT1A1 LTR MaLR 0 365 165 716 253 30 39 chr2 148828052 148828285 -104428298 - MLT1A1 LTR MaLR -134 231 1 1726 167 3 41 chr2 148828833 148829151 -104427432 + AluJo SINE Alu 1 306 -6 1411 168 79 34 chr2 148829246 148829537 -104427046 + AluJb SINE Alu 1 304 -8 704 206 0 0 chr2 148829970 148830096 -104426487 - FLAM_C SINE Alu -17 126 1 250 44 0 89 chr2 148830472 148830517 -104426066 + FLAM SINE Alu 87 127 -6 786 298 128 67 chr2 148830701 148831539 -104425044 - MER52A LTR ERV1 -4 1751 835 2046 119 11 0 chr2 148831539 148831824 -104424759 + AluSx SINE Alu 17 304 -8 786 298 128 67 chr2 148831824 148832020 -104424563 - MER52A LTR ERV1 -920 835 653 243 219 0 55 chr2 148832397 148832470 -104424113 - Alu SINE Alu 0 301 233 1349 33 0 0 chr2 148832699 148832851 -104423732 + AluYa8 SINE Alu 159 310 0 414 0 0 0 chr2 148833084 148833130 -104423453 + (A)n Simple_repeat Simple_repeat 1 46 0 312 263 83 105 chr2 148833745 148834117 -104422466 + L1 LINE L1 2816 3179 -2967 1840 187 0 3 chr2 148834157 148834457 -104422126 + AluJb SINE Alu 8 306 -6 381 159 11 57 chr2 148834465 148834553 -104422030 + L1MC2 LINE L1 6247 6330 -14 1968 71 0 16 chr2 148834842 148835123 -104421460 + AluY SINE Alu 35 311 0 231 210 15 34 chr2 148836796 148836970 -104419613 + GA-rich Low_complexity Low_complexity 1 170 0 270 337 24 0 chr2 148838054 148838137 -104418446 + L2 LINE L2 3187 3271 -1 3759 178 71 0 chr2 148838139 148838813 -104417770 - MER72 LTR ERV1 0 722 1 312 325 33 8 chr2 148839451 148839571 -104417012 - MIR SINE MIR -74 188 66 191 354 121 0 chr2 148841588 148841687 -104414896 - MIR SINE MIR -71 191 81 341 374 35 23 chr2 148843730 148843901 -104412682 - L2 LINE L2 -182 3090 2918 741 321 144 36 chr2 148844381 148844477 -104412106 + L2 LINE L2 2262 2346 -967 1214 168 61 84 chr2 148844477 148844774 -104411809 - AluJo SINE Alu -12 290 1 741 321 144 36 chr2 148844774 148845052 -104411531 + L2 LINE L2 2346 2593 -720 5767 60 0 0 chr2 148845052 148845772 -104410811 - L1PA6 LINE L1 -1 6153 5434 741 321 144 36 chr2 148845772 148845905 -104410678 + L2 LINE L2 2593 2710 -603 2427 57 6 16 chr2 148845905 148846219 -104410364 - AluY SINE Alu 0 311 1 741 321 144 36 chr2 148846219 148846654 -104409929 + L2 LINE L2 2710 3313 0 219 205 313 0 chr2 148847312 148847395 -104409188 - MIR SINE MIR -6 256 148 1225 101 0 34 chr2 148847410 148847588 -104408995 - AluSg/x SINE Alu 0 312 141 1082 78 0 0 chr2 148847827 148847956 -104408627 - AluSq/x SINE Alu -184 129 1 30 0 0 0 chr2 148848346 148848376 -104408207 + AT_rich Low_complexity Low_complexity 1 30 0 2224 68 0 0 chr2 148849680 148849987 -104406596 + AluY SINE Alu 1 307 0 2731 210 78 4 chr2 148849998 148850694 -104405889 + L1MB1 LINE L1 5398 6144 -24 1846 175 0 0 chr2 148850968 148851253 -104405330 + AluJo SINE Alu 2 286 -26 580 293 48 0 chr2 148851320 148851467 -104405116 + MER5A DNA MER1_type 1 154 -35 204 269 75 99 chr2 148851546 148851747 -104404836 - L2 LINE L2 0 3313 3118 656 225 24 36 chr2 148851901 148852189 -104404394 - MER39 LTR ERV1 0 707 357 491 225 111 10 chr2 148852215 148852429 -104404154 - MER39 LTR ERV1 -433 274 2 23 0 0 0 chr2 148852760 148852783 -104403800 + AT_rich Low_complexity Low_complexity 1 23 0 256 141 22 54 chr2 148852914 148853006 -104403577 + GA-rich Low_complexity Low_complexity 2 90 0 343 276 95 59 chr2 148853037 148853268 -104403315 - L1ME LINE L1 -385 5736 5478 1974 163 0 0 chr2 148853268 148853568 -104403015 - AluJb SINE Alu -11 301 2 343 276 95 59 chr2 148853568 148853702 -104402881 - L1ME LINE L1 -643 5478 5350 21 36 0 0 chr2 148853725 148853753 -104402830 + AT_rich Low_complexity Low_complexity 1 28 0 227 354 25 20 chr2 148853818 148853919 -104402664 - MIR3 SINE MIR -110 98 4 331 237 58 7 chr2 148853926 148854065 -104402518 - L1MB7 LINE L1 0 6184 6039 1635 201 3 3 chr2 148854711 148855004 -104401579 - AluJb SINE Alu -19 293 1 412 272 109 62 chr2 148855606 148855926 -104400657 - MLT1J LTR MaLR -166 345 11 328 335 189 43 chr2 148855929 148856368 -104400215 - L2 LINE L2 -1056 2258 1756 431 233 80 13 chr2 148857251 148857401 -104399182 - L1ME3A LINE L1 -34 6136 5977 674 128 9 18 chr2 148857627 148857736 -104398847 + FLAM_C SINE Alu 13 120 -23 1237 253 54 23 chr2 148857966 148858409 -104398174 - L1ME1 LINE L1 -51 6115 5659 479 243 14 89 chr2 148858415 148858471 -104398112 - MER58C DNA MER1_type -2216 204 145 1658 211 10 0 chr2 148858471 148858765 -104397818 - AluJb SINE Alu -7 305 9 479 243 14 89 chr2 148858765 148858922 -104397661 - MER58C DNA MER1_type -2275 145 7 1066 209 37 61 chr2 148858946 148859323 -104397260 - L1ME1 LINE L1 -539 5627 5260 620 180 0 31 chr2 148859325 148859453 -104397130 - AluJo SINE Alu -2 310 187 654 191 0 0 chr2 148859456 148859566 -104397017 - AluJo SINE Alu -190 122 13 646 272 5 5 chr2 148859570 148859787 -104396796 - L1ME1 LINE L1 -855 5291 5075 831 222 117 4 chr2 148859801 148860067 -104396516 - L1ME1 LINE L1 -3244 2902 2607 1277 213 82 3 chr2 148860667 148860971 -104395612 - AluJb SINE Alu 0 312 1 4942 97 30 74 chr2 148861472 148862286 -104394297 - LTR17 LTR ERV1 -2 778 1 2052 77 21 3 chr2 148862286 148862573 -104394010 - HERV17 LTR ERV1 0 8626 8335 265 50 25 0 chr2 148862563 148862603 -104393980 - HERV17 LTR ERV1 -1078 7548 7508 * 1035 24 0 0 chr2 148862594 148862719 -104393864 - HERV17 LTR ERV1 -2607 6019 5895 5898 79 29 3 chr2 148862719 148863479 -104393104 - LTR17 LTR ERV1 0 780 1 2071 87 14 0 chr2 148863479 148863767 -104392816 - HERV17 LTR ERV1 0 8626 8335 643 117 0 0 chr2 148863771 148863865 -104392718 + AluY SINE Alu 206 299 -12 281 51 0 0 chr2 148863865 148863904 -104392679 - HERV17 LTR ERV1 -1079 7547 7509 * 24017 128 43 42 chr2 148863896 148869918 -104386665 - HERV17 LTR ERV1 -2607 6019 2 5613 120 13 7 chr2 148869918 148870693 -104385890 - LTR17 LTR ERV1 0 780 1 28 71 0 0 chr2 148871066 148871122 -104385461 + AT_rich Low_complexity Low_complexity 1 56 0 223 284 55 64 chr2 148871285 148871394 -104385189 + MER5B DNA MER1_type 40 147 -31 2290 102 0 0 chr2 148871434 148871727 -104384856 - AluY SINE Alu -18 293 1 11142 209 24 22 chr2 148872138 148872925 -104383658 - L1PA16 LINE L1 0 7604 6820 1972 99 0 0 chr2 148872925 148873187 -104383396 - AluY SINE Alu -7 304 43 11142 209 24 22 chr2 148873187 148874791 -104381792 - L1PA16 LINE L1 -784 6820 5221 213 39 0 0 chr2 148874791 148874817 -104381766 + (TTG)n Simple_repeat Simple_repeat 2 27 0 11142 209 24 22 chr2 148874817 148875161 -104381422 - L1PA16 LINE L1 -2383 5221 4879 2535 80 3 0 chr2 148875161 148875472 -104381111 - AluSp SINE Alu -1 312 1 11142 209 24 22 chr2 148875472 148875497 -104381086 - L1PA16 LINE L1 -2725 4879 4856 2285 94 3 10 chr2 148875497 148875804 -104380779 - AluY SINE Alu -6 305 1 11142 209 24 22 chr2 148875804 148876782 -104379801 - L1PA16 LINE L1 -2748 4856 3793 1049 313 35 7 chr2 148876843 148877246 -104379337 - L1PA16 LINE L1 -7166 415 2 1779 198 9 0 chr2 148877289 148877607 -104378976 + Tigger1 DNA MER2_type 20 340 -2078 * 1903 97 27 0 chr2 148877605 148877864 -104378719 - LTR9B LTR ERV1 -378 266 1 1289 181 107 80 chr2 148878597 148878972 -104377611 + MLT1B LTR MaLR 1 385 -5 702 249 30 0 chr2 148879125 148879294 -104377289 + MER58A DNA MER1_type 43 216 -8 25 0 0 0 chr2 148880254 148880279 -104376304 + AT_rich Low_complexity Low_complexity 1 25 0 814 162 0 0 chr2 148880279 148880396 -104376187 - FLAM_C SINE Alu -15 118 2 22 0 0 0 chr2 148881363 148881385 -104375198 + AT_rich Low_complexity Low_complexity 1 22 0 2052 162 12 3 chr2 148881629 148881962 -104374621 + MER2 DNA MER2_type 1 336 -9 252 253 227 0 chr2 148881983 148882058 -104374525 - MIR SINE MIR -63 145 54 912 145 0 14 chr2 148882447 148882585 -104373998 + AluSq/x SINE Alu 1 136 -176 1850 130 11 0 chr2 148882585 148882846 -104373737 + AluSx SINE Alu 1 264 -48 23 0 0 0 chr2 148882854 148882877 -104373706 + AT_rich Low_complexity Low_complexity 1 23 0 272 123 158 0 chr2 148883829 148883886 -104372697 - MER34 LTR ERV1 -48 494 429 573 163 54 0 chr2 148884225 148884317 -104372266 + AluJ/FLAM SINE Alu 3 99 -213 1623 185 7 4 chr2 148884324 148884600 -104371983 + AluJb SINE Alu 5 281 -31 450 0 0 0 chr2 148884604 148884654 -104371929 + (CATA)n Simple_repeat Simple_repeat 2 51 0 1795 163 0 17 chr2 148885013 148885308 -104371275 + AluJb SINE Alu 1 290 -22 1768 218 25 6 chr2 148885615 148885973 -104370610 - MLT1A1 LTR MaLR 0 365 1 1816 150 3 28 chr2 148886880 148887200 -104369383 - AluJo SINE Alu 0 312 1 246 227 80 57 chr2 148888303 148888391 -104368192 - MIR SINE MIR -56 206 117 413 238 156 0 chr2 148888423 148888545 -104368038 - MER63A DNA MER1_type 0 210 70 2598 60 6 0 chr2 148888767 148889082 -104367501 + L1PA7 LINE L1 5835 6151 -3 26 88 0 0 chr2 148889142 148889210 -104367373 + AT_rich Low_complexity Low_complexity 1 68 0 29 28 0 0 chr2 148890730 148890766 -104365817 + AT_rich Low_complexity Low_complexity 1 36 0 227 319 72 36 chr2 148891441 148891519 -104365064 - L2 LINE L2 -5 3267 3180 1839 169 7 7 chr2 148891519 148891826 -104364757 + AluJb SINE Alu 1 307 -5 227 319 72 36 chr2 148891826 148891885 -104364698 - L2 LINE L2 -92 3180 3125 331 280 63 69 chr2 148891960 148892149 -104364434 + HAL1 LINE L1 4 191 -2316 216 0 0 0 chr2 148892153 148892177 -104364406 + (A)n Simple_repeat Simple_repeat 1 24 0 3431 173 48 65 chr2 148892250 148893037 -104363546 - MER4E LTR ERV1 -5 774 1 480 286 27 38 chr2 148893038 148893223 -104363360 + HAL1 LINE L1 300 482 -2025 1241 196 48 94 chr2 148893225 148893617 -104362966 - MLT1B LTR MaLR -16 374 1 2751 96 32 52 chr2 148893628 148894034 -104362549 - MER48 LTR ERV1 0 398 1 1269 103 0 11 chr2 148894034 148894219 -104362364 - HERVH48 LTR ERV1 0 6654 6472 30842 120 31 15 chr2 148894219 148899682 -104356901 - HERVH48 LTR ERV1 -1001 5653 1 2548 118 45 52 chr2 148899684 148900084 -104356499 - MER48 LTR ERV1 -1 397 1 245 272 149 9 chr2 148900146 148900260 -104356323 + HAL1 LINE L1 634 763 -1744 2466 162 10 5 chr2 148900277 148900678 -104355905 - MER57A LTR ERV1 0 403 1 1971 103 15 0 chr2 148900679 148900950 -104355633 - MER57A-int LTR ERV1 -2 7535 7261 617 144 27 0 chr2 148900952 148901063 -104355520 - LTR54B LTR ERV1 -382 116 3 2520 170 10 0 chr2 148901066 148901465 -104355118 - MER57A LTR ERV1 0 403 1 1429 191 48 15 chr2 148901633 148901751 -104354832 + AluJb SINE Alu 1 114 -190 245 29 0 29 chr2 148901751 148901786 -104354797 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 1429 191 48 15 chr2 148901786 148901962 -104354621 + AluJb SINE Alu 114 304 0 2393 95 3 0 chr2 148902116 148902422 -104354161 + AluSg SINE Alu 3 309 -1 1257 236 157 91 chr2 148903537 148904131 -104352452 - MER21B LTR ERV1 -212 651 19 926 153 148 30 chr2 148904386 148904588 -104351995 - LTR51 LTR ERV1 -445 226 1 1677 170 50 27 chr2 148904684 148904984 -104351599 + AluJb SINE Alu 6 312 0 4237 140 42 12 chr2 148905335 148906027 -104350556 - MER50 LTR ERV1 -21 713 1 23 0 0 0 chr2 148906381 148906404 -104350179 + AT_rich Low_complexity Low_complexity 1 23 0 356 304 62 6 chr2 148906938 148907099 -104349484 + MIR SINE MIR 87 256 -6 8814 135 25 53 chr2 148907586 148908538 -104348045 - Tigger1 DNA MER2_type 0 2418 1441 2014 136 14 7 chr2 148908538 148908832 -104347751 - AluSx SINE Alu -16 296 1 8814 135 25 53 chr2 148908832 148908864 -104347719 - Tigger1 DNA MER2_type -977 1441 1410 1614 181 7 7 chr2 148908864 148909152 -104347431 - AluJb SINE Alu 0 312 25 8814 135 25 53 chr2 148909152 148909761 -104346822 - Tigger1 DNA MER2_type -1008 1410 868 4811 142 54 13 chr2 148910976 148911195 -104345388 - Tigger1 DNA MER2_type -1535 883 675 2286 126 51 28 chr2 148911195 148911551 -104345032 - THE1B LTR MaLR 0 364 1 12496 95 8 2 chr2 148911551 148913122 -104343461 - THE1B-int LTR MaLR 0 1580 1 2349 100 63 29 chr2 148913122 148913472 -104343111 - THE1B LTR MaLR 0 364 3 4811 142 54 13 chr2 148913472 148914040 -104342543 - Tigger1 DNA MER2_type -1742 676 61 198 0 0 0 chr2 148914042 148914064 -104342519 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 1171 183 130 16 chr2 148914065 148914311 -104342272 + AluSx SINE Alu 1 274 -38 1467 197 30 10 chr2 148914870 148915170 -104341413 - AluSx SINE Alu -6 306 1 185 35 69 0 chr2 148915187 148915216 -104341367 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1149 190 56 37 chr2 148915225 148915493 -104341090 - AluJo SINE Alu 0 312 40 1557 199 131 32 chr2 148915839 148916250 -104340333 - LTR47A LTR ERVL 0 452 1 467 359 32 9 chr2 148918283 148918500 -104338083 + MIR SINE MIR 40 261 -1 738 207 0 0 chr2 148919656 148919796 -104336787 + FLAM_C SINE Alu 3 142 -1 325 337 54 27 chr2 148920969 148921153 -104335430 + MIR SINE MIR 5 193 -69 230 56 28 0 chr2 148921898 148921934 -104334649 + (CA)n Simple_repeat Simple_repeat 1 37 0 2230 105 7 0 chr2 148922096 148922392 -104334191 + AluSp SINE Alu 1 298 -15 210 71 0 0 chr2 148922703 148922731 -104333852 + (TTTAG)n Simple_repeat Simple_repeat 3 30 0 1394 131 176 0 chr2 148922731 148922975 -104333608 - AluSx SINE Alu -14 288 2 2101 113 3 0 chr2 148923704 148923995 -104332588 + AluSg SINE Alu 1 292 -18 216 0 0 0 chr2 148924066 148924090 -104332493 + (T)n Simple_repeat Simple_repeat 1 24 0 339 330 160 10 chr2 148925018 148925224 -104331359 + MIR SINE MIR 20 256 -6 332 259 75 79 chr2 148925959 148926109 -104330474 - L1ME3A LINE L1 -26 6144 5994 1686 196 11 30 chr2 148926109 148926481 -104330102 - MLT1A1 LTR MaLR 0 365 1 332 259 75 79 chr2 148926481 148926558 -104330025 - L1ME3A LINE L1 -176 5994 5918 1148 159 68 18 chr2 148926599 148926819 -104329764 - MER46A DNA MER2_type 0 236 6 1327 277 51 36 chr2 148926834 148927447 -104329136 - L1ME3A LINE L1 -271 5899 5278 330 302 26 0 chr2 148928667 148928783 -104327800 + CT-rich Low_complexity Low_complexity 2 120 0 21 36 0 0 chr2 148928937 148928965 -104327618 + AT_rich Low_complexity Low_complexity 1 28 0 296 253 182 10 chr2 148929199 148929298 -104327285 - MLT1J1 LTR MaLR -285 161 46 450 292 72 60 chr2 148929372 148929622 -104326961 + MIR SINE MIR 2 254 -8 243 0 0 0 chr2 148930005 148930032 -104326551 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 24 0 0 0 chr2 148930257 148930281 -104326302 + AT_rich Low_complexity Low_complexity 1 24 0 261 365 19 19 chr2 148930989 148931096 -104325487 - L2 LINE L2 -181 3091 2985 325 306 104 33 chr2 148931222 148931405 -104325178 - L2 LINE L2 -518 2796 2601 1630 184 4 0 chr2 148931427 148931730 -104324853 + AluJb SINE Alu 5 308 0 270 314 0 0 chr2 148931958 148932044 -104324539 + (TA)n Simple_repeat Simple_repeat 1 86 0 23 33 0 0 chr2 148933175 148933205 -104323378 + AT_rich Low_complexity Low_complexity 1 30 0 512 253 58 82 chr2 148933795 148934068 -104322515 + Charlie8 DNA MER1_type 33 245 -2172 225 0 0 0 chr2 148934100 148934125 -104322458 + (TG)n Simple_repeat Simple_repeat 2 26 0 300 323 174 10 chr2 148935302 148935503 -104321080 - MIR SINE MIR -1 261 28 207 0 0 0 chr2 148935586 148935609 -104320974 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 243 0 0 0 chr2 148935608 148935635 -104320948 + (GA)n Simple_repeat Simple_repeat 2 28 0 2771 96 87 0 chr2 148936857 148937284 -104319299 - MER4C LTR ERV1 -1 464 1 1903 180 214 55 chr2 148937769 148938481 -104318102 + LTR1B LTR ERV1 1 825 -1 2095 159 56 0 chr2 148938752 148939110 -104317473 - MER83B LTR ERV1 0 378 1 3589 105 66 37 chr2 148939419 148940012 -104316571 - MER4B LTR ERV1 0 610 1 26 0 0 0 chr2 148941478 148941504 -104315079 + AT_rich Low_complexity Low_complexity 1 26 0 704 191 0 22 chr2 148942435 148942571 -104314012 + FLAM_C SINE Alu 1 133 0 4107 79 9 94 chr2 148942583 148943277 -104313306 - MER41B LTR ERV1 0 635 1 25 0 0 0 chr2 148943823 148943848 -104312735 + AT_rich Low_complexity Low_complexity 1 25 0 917 206 23 0 chr2 148944601 148944776 -104311807 - MER58A DNA MER1_type -1 223 45 654 300 106 46 chr2 148945779 148946253 -104310330 - MLT1H LTR MaLR -16 533 32 4631 238 84 9 chr2 148946378 148947731 -104308852 - Charlie1a DNA MER1_type 0 1455 1 30 27 0 0 chr2 148948374 148948411 -104308172 + AT_rich Low_complexity Low_complexity 1 37 0 324 290 14 55 chr2 148950393 148950505 -104306078 + MIR SINE MIR 120 226 -36 2116 124 140 8 chr2 148950505 148950883 -104305700 + MSTA LTR MaLR 1 428 0 324 290 14 55 chr2 148950883 148950915 -104305668 + MIR SINE MIR 226 258 -4 264 213 16 0 chr2 148951083 148951144 -104305439 + LTR37B LTR ERV1 198 259 -209 392 209 0 55 chr2 148951265 148951375 -104305208 + LTR37B LTR ERV1 357 460 -8 31 82 0 0 chr2 148955188 148955261 -104301322 + AT_rich Low_complexity Low_complexity 1 73 0 262 176 29 13 chr2 148959160 148959267 -104297316 - FLAM SINE Alu -10 123 82 215 329 13 0 chr2 148959459 148959535 -104297048 - L2 LINE L2 -493 2821 2745 225 311 38 47 chr2 148959564 148959670 -104296913 + MIR3 SINE MIR 97 201 -7 1355 148 5 10 chr2 148961500 148961709 -104294874 + AluSc SINE Alu 3 210 -99 27 0 0 0 chr2 148961848 148961875 -104294708 + AT_rich Low_complexity Low_complexity 1 27 0 1869 157 3 7 chr2 148961939 148962244 -104294339 + AluSc SINE Alu 3 306 -3 396 341 79 23 chr2 148962400 148962614 -104293969 + MIR SINE MIR 33 258 -4 23 33 0 0 chr2 148962816 148962846 -104293737 + AT_rich Low_complexity Low_complexity 1 30 0 2195 197 18 9 chr2 148963646 148964102 -104292481 - MER65C LTR ERV1 0 461 2 291 198 198 23 chr2 148964352 148964438 -104292145 - MLT1E LTR MaLR -492 101 1 421 264 41 8 chr2 148964930 148965051 -104291532 + MIR SINE MIR 76 200 -62 1831 120 3 63 chr2 148966488 148966789 -104289794 + AluSx SINE Alu 1 311 0 213 0 36 0 chr2 148966789 148966817 -104289766 + (CAAA)n Simple_repeat Simple_repeat 2 64 0 1942 129 35 0 chr2 148967634 148967921 -104288662 + AluSx SINE Alu 1 297 -15 204 298 96 19 chr2 148968523 148968627 -104287956 - L2 LINE L2 -5 3308 3197 596 66 0 0 chr2 148968913 148968989 -104287594 - MADE1 DNA Mariner 0 80 5 42877 31 21 1 chr2 148969248 148975279 -104281304 + L1PA2 LINE L1 1 6155 0 2180 122 0 3 chr2 148975404 148975707 -104280876 + AluSx SINE Alu 3 304 -8 2034 219 12 85 chr2 148975793 148976185 -104280398 - L1MA8 LINE L1 -27 6264 5845 1033 192 0 11 chr2 148976185 148976362 -104280221 - FAM SINE Alu 0 175 1 2034 219 12 85 chr2 148976362 148976501 -104280082 - L1MA8 LINE L1 -446 5845 5798 189 0 0 0 chr2 148976501 148976522 -104280061 + (TG)n Simple_repeat Simple_repeat 2 22 0 2034 219 12 85 chr2 148976522 148976716 -104279867 - L1MA8 LINE L1 -493 5798 5591 1280 211 11 11 chr2 148978085 148978355 -104278228 - AluJo SINE Alu -4 308 39 4912 126 25 45 chr2 148979933 148980631 -104275952 - L1PA16 LINE L1 0 6166 5487 2262 110 13 0 chr2 148980631 148980940 -104275643 - AluSq SINE Alu 0 313 1 4912 126 25 45 chr2 148980940 148981114 -104275469 - L1PA16 LINE L1 -679 5487 5311 12283 185 30 20 chr2 148981145 148983907 -104272676 - L1MA8 LINE L1 -788 5358 2570 1095 293 35 14 chr2 148983906 148984370 -104272213 - L1MC/D LINE L1 -672 5479 5269 * 326 256 44 44 chr2 148984538 148984608 -104271975 - L1MC/D LINE L1 -1477 4669 4597 2698 144 17 2 chr2 148984608 148985030 -104271553 - MSTA LTR MaLR 0 428 1 326 256 44 44 chr2 148985030 148985096 -104271487 - L1MC/D LINE L1 -1548 4598 4533 265 275 105 20 chr2 148985452 148985652 -104270931 - L1P LINE L1 -2212 3934 3718 21 0 0 0 chr2 148985686 148985707 -104270876 + AT_rich Low_complexity Low_complexity 1 21 0 567 276 65 56 chr2 148986150 148986582 -104270001 - L1MC/D LINE L1 -2975 3171 2736 633 293 115 39 chr2 148987455 148988123 -104268460 - HAL1b LINE L1 -534 814 96 200 216 0 20 chr2 148988223 148988274 -104268309 + T-rich Low_complexity Low_complexity 5 54 0 601 207 8 48 chr2 148989568 148989730 -104266853 - LTR28 LTR ERV1 0 1020 667 386 195 50 206 chr2 148989773 148990055 -104266528 - LTR1B LTR ERV1 -81 745 508 546 251 103 40 chr2 148990088 148990351 -104266232 - LTR1 LTR ERV1 -555 230 1 2301 90 7 0 chr2 148991442 148991743 -104264840 - AluSg SINE Alu -7 303 1 5560 263 6 6 chr2 148993163 148994809 -104261774 - L1 LINE L1 -1605 4541 2896 2418 276 9 6 chr2 148994910 148995926 -104260657 + L1MA9 LINE L1 4913 5931 -381 217 108 31 77 chr2 149000240 149000305 -104256278 + A-rich Low_complexity Low_complexity 6 67 0 31 0 0 0 chr2 149000417 149000448 -104256135 + AT_rich Low_complexity Low_complexity 1 31 0 25 0 0 0 chr2 149000457 149000482 -104256101 + GC_rich Low_complexity Low_complexity 1 25 0 1191 116 0 0 chr2 149000710 149000898 -104255685 + AluSp SINE Alu 129 316 0 21 89 0 0 chr2 149001038 149001094 -104255489 + AT_rich Low_complexity Low_complexity 1 56 0 22 0 0 0 chr2 149001173 149001195 -104255388 + AT_rich Low_complexity Low_complexity 1 22 0 1913 157 3 0 chr2 149001322 149001608 -104254975 + AluSx SINE Alu 3 289 -23 284 324 55 41 chr2 149002010 149002229 -104254354 + MIR SINE MIR 22 243 -19 972 177 8 89 chr2 149002493 149002730 -104253853 - AluJo SINE Alu -13 299 82 2143 163 3 6 chr2 149002751 149003114 -104253469 - MER47A DNA MER2_type -1 365 4 215 339 59 17 chr2 149003164 149003282 -104253301 + MIR3 SINE MIR 38 160 -48 1060 230 5 5 chr2 149003282 149003459 -104253124 - MER58A DNA MER1_type -2196 224 45 1855 161 3 3 chr2 149003459 149003757 -104252826 + AluJb SINE Alu 1 298 -14 1060 230 5 5 chr2 149003757 149003788 -104252795 - MER58A DNA MER1_type -2374 46 16 1632 162 53 56 chr2 149003794 149003966 -104252617 - THE1C LTR MaLR 0 375 204 204 40 0 0 chr2 149003966 149003991 -104252592 + (GA)n Simple_repeat Simple_repeat 1 25 0 1632 162 53 56 chr2 149003991 149004012 -104252571 - THE1C LTR MaLR -171 204 184 2458 71 0 3 chr2 149004012 149004323 -104252260 + AluY SINE Alu 1 310 -1 1632 162 53 56 chr2 149004323 149004504 -104252079 - THE1C LTR MaLR -191 184 1 336 24 0 0 chr2 149004728 149004769 -104251814 + (TG)n Simple_repeat Simple_repeat 2 42 0 267 241 0 0 chr2 149005522 149005576 -104251007 + L2 LINE L2 3203 3256 -16 194 245 0 19 chr2 149005611 149005664 -104250919 + MIR SINE MIR 70 121 -141 206 308 0 15 chr2 149005705 149005770 -104250813 - L2 LINE L2 0 3313 3250 26 0 0 0 chr2 149005987 149006013 -104250570 + AT_rich Low_complexity Low_complexity 1 26 0 255 231 49 14 chr2 149006121 149006264 -104250319 + (TA)n Simple_repeat Simple_repeat 2 149 0 195 357 82 0 chr2 149006344 149006442 -104250141 + L3 LINE CR1 1471 1576 -1 634 162 0 10 chr2 149007158 149007257 -104249326 - AluJo SINE Alu -125 187 90 1302 204 9 63 chr2 149007606 149007784 -104248799 - AluJo SINE Alu -11 301 115 1376 202 62 7 chr2 149007784 149008076 -104248507 - AluJb SINE Alu -4 308 1 1302 204 9 63 chr2 149008076 149008169 -104248414 - AluJo SINE Alu -197 115 47 4616 66 7 0 chr2 149008169 149008756 -104247827 - LTR10C LTR ERV1 0 591 1 1302 204 9 63 chr2 149008756 149008801 -104247782 - AluJo SINE Alu -265 47 1 241 347 28 14 chr2 149009184 149009328 -104247255 + MIR3 SINE MIR 33 178 -30 21 36 0 0 chr2 149009743 149009771 -104246812 + AT_rich Low_complexity Low_complexity 1 28 0 4827 73 51 0 chr2 149011545 149012173 -104244410 - PABL_A LTR ERV1 0 660 1 252 380 29 10 chr2 149013353 149013561 -104243022 + MIR SINE MIR 37 248 -14 617 95 0 11 chr2 149014600 149014695 -104241888 + (TA)n Simple_repeat Simple_repeat 2 95 0 336 178 69 69 chr2 149014787 149014888 -104241695 + HsTC2 DNA Tc2 3 103 -1795 256 283 111 0 chr2 149015001 149015100 -104241483 + MER112 DNA MER1_type 134 243 -17 192 329 53 0 chr2 149015553 149015629 -104240954 - MIR SINE MIR 0 262 183 301 215 15 0 chr2 149015732 149015797 -104240786 + L1MC4 LINE L1 6636 6701 -1341 228 85 17 34 chr2 149015807 149015866 -104240717 + (TA)n Simple_repeat Simple_repeat 2 59 0 7109 102 5 10 chr2 149015866 149017682 -104238901 - L1PA7 LINE L1 -14 6140 4327 639 212 0 53 chr2 149017682 149017814 -104238769 - FLAM_A SINE Alu -8 125 1 225 377 9 66 chr2 149017835 149017941 -104238642 - L2 LINE L2 -69 3203 3104 239 183 134 0 chr2 149018318 149018400 -104238183 - L1ME LINE L1 -285 5885 5793 22 0 0 0 chr2 149018517 149018539 -104238044 + AT_rich Low_complexity Low_complexity 1 22 0 500 281 53 73 chr2 149018606 149019004 -104237579 - L1M4 LINE L1 -1301 4845 4456 1463 186 10 48 chr2 149019079 149019390 -104237193 - AluJo SINE Alu -3 299 1 207 100 0 0 chr2 149019503 149019533 -104237050 + (TTCC)n Simple_repeat Simple_repeat 3 32 0 1326 204 40 30 chr2 149019559 149019863 -104236720 - AluJo SINE Alu -3 309 3 1976 124 62 0 chr2 149019868 149020158 -104236425 - AluSx SINE Alu -4 308 1 281 68 23 0 chr2 149020466 149020510 -104236073 + (TC)n Simple_repeat Simple_repeat 1 45 0 303 307 24 0 chr2 149020651 149020778 -104235805 - L1MEc LINE L1 -4753 1643 1514 * 1349 49 0 0 chr2 149020777 149020940 -104235643 + L1PA8A LINE L1 5406 5568 -563 251 291 99 23 chr2 149021043 149021215 -104235368 - L1MEc LINE L1 -4893 1312 1128 405 255 49 49 chr2 149021522 149021726 -104234857 + LTR16A1 LTR ERVL 254 457 0 361 300 118 32 chr2 149021790 149022010 -104234573 - L1MEc LINE L1 -5362 843 605 292 174 65 19 chr2 149022021 149022176 -104234407 + (TA)n Simple_repeat Simple_repeat 2 163 0 2658 64 20 17 chr2 149022200 149022558 -104234025 - L1PA8A LINE L1 -12 6119 5761 21 0 0 0 chr2 149023050 149023071 -104233512 + AT_rich Low_complexity Low_complexity 1 21 0 597 309 28 39 chr2 149023113 149023505 -104233078 - L1MC5 LINE L1 -934 6874 6563 1518 159 87 11 chr2 149023560 149023836 -104232747 + THE1B LTR MaLR 68 364 0 10646 88 17 62 chr2 149023836 149025491 -104231092 + THE1B-int LTR MaLR 1 1580 0 2006 147 76 9 chr2 149025491 149025832 -104230751 + THE1B LTR MaLR 1 364 0 1146 183 81 59 chr2 149025832 149026105 -104230478 + MER21B LTR ERV1 568 846 -17 29 47 0 0 chr2 149026161 149026204 -104230379 + AT_rich Low_complexity Low_complexity 1 43 0 349 257 121 59 chr2 149026653 149027093 -104229490 + L1MC4 LINE L1 7310 7776 -185 1842 227 25 39 chr2 149027137 149027649 -104228934 - MLT1D LTR MaLR 0 505 1 470 17 0 17 chr2 149027649 149027709 -104228874 + (GGAA)n Simple_repeat Simple_repeat 1 59 0 303 197 190 58 chr2 149027710 149027847 -104228736 + L1MC5 LINE L1 7782 7936 -25 1960 155 53 14 chr2 149027962 149028323 -104228260 - THE1C LTR MaLR 0 375 1 9698 131 45 3 chr2 149028323 149029839 -104226744 - THE1C-int LTR MaLR 0 1580 1 2052 144 41 24 chr2 149029839 149030208 -104226375 - THE1C LTR MaLR 0 375 1 1187 289 93 61 chr2 149031890 149032859 -104223724 + HAL1 LINE L1 156 1155 -1352 697 232 61 76 chr2 149033221 149033549 -104223034 + HAL1 LINE L1 2090 2412 -95 392 355 65 0 chr2 149033619 149033819 -104222764 + MIR SINE MIR 18 230 -32 23 0 0 0 chr2 149035542 149035565 -104221018 + AT_rich Low_complexity Low_complexity 1 23 0 419 338 14 0 chr2 149035628 149035776 -104220807 - MIR SINE MIR -13 249 100 315 49 0 0 chr2 149036011 149036052 -104220531 + (TG)n Simple_repeat Simple_repeat 1 41 0 346 294 5 26 chr2 149036862 149037056 -104219527 + L1MD2 LINE L1 1982 2171 -4213 3856 265 86 37 chr2 149037087 149040614 -104215969 + L1MD2 LINE L1 2633 6400 -195 288 0 0 0 chr2 149040614 149040646 -104215937 + (CA)n Simple_repeat Simple_repeat 2 33 0 3856 265 86 37 chr2 149040646 149040801 -104215782 + L1MD2 LINE L1 6400 6546 -49 1886 200 106 15 chr2 149040834 149041315 -104215268 - MER63C DNA MER1_type -151 779 255 870 129 0 0 chr2 149042407 149042568 -104214015 + AluSg/x SINE Alu 158 318 0 185 264 92 46 chr2 149042704 149042791 -104213792 + L2 LINE L2 2598 2688 -626 727 242 41 113 chr2 149042796 149043159 -104213424 + MLT1F LTR MaLR 9 345 -197 22 0 0 0 chr2 149043285 149043307 -104213276 + AT_rich Low_complexity Low_complexity 1 22 0 34 0 0 0 chr2 149043843 149043877 -104212706 + AT_rich Low_complexity Low_complexity 1 34 0 1428 306 45 30 chr2 149045632 149046204 -104210379 + MLT1E LTR MaLR 10 590 -3 244 277 0 59 chr2 149046386 149046487 -104210096 + MLT1H1-int LTR MaLR 1029 1123 -248 458 111 111 0 chr2 149046529 149046601 -104209982 - MSTB LTR MaLR 0 426 347 2174 128 33 41 chr2 149046603 149046970 -104209613 + THE1B LTR MaLR 1 364 0 11187 112 13 2 chr2 149046970 149047339 -104209244 + THE1B-int LTR MaLR 1 364 -1216 2302 99 0 16 chr2 149047339 149047653 -104208930 - AluY SINE Alu -2 309 1 11187 112 13 2 chr2 149047653 149048846 -104207737 + THE1B-int LTR MaLR 364 1580 0 212 318 0 68 chr2 149048889 149048977 -104207606 - L2 LINE L2 -336 2977 2896 671 249 55 111 chr2 149049053 149049153 -104207430 + MER58B DNA MER1_type 1 105 -2315 1738 177 3 10 chr2 149049153 149049464 -104207119 - AluJo SINE Alu 0 312 4 671 249 55 111 chr2 149049464 149049684 -104206899 + MER58B DNA MER1_type 105 301 -2119 2235 119 0 0 chr2 149049684 149049987 -104206596 - AluSx SINE Alu -9 303 1 671 249 55 111 chr2 149049987 149050026 -104206557 + MER58B DNA MER1_type 301 341 0 946 227 66 0 chr2 149050591 149050847 -104205736 - MER58B DNA MER1_type 0 341 69 448 299 16 84 chr2 149050952 149051196 -104205387 + MIR SINE MIR 26 254 -8 288 0 0 0 chr2 149051346 149051378 -104205205 + (TG)n Simple_repeat Simple_repeat 2 33 0 21 0 0 0 chr2 149051667 149051688 -104204895 + AT_rich Low_complexity Low_complexity 1 21 0 1536 298 80 4 chr2 149051787 149052298 -104204285 + MLT1H1 LTR MaLR 6 555 0 353 212 140 84 chr2 149052558 149052737 -104203846 + MER46C DNA MER2_type 106 294 -44 1045 232 27 9 chr2 149052764 149052988 -104203595 + MIR SINE MIR 35 262 0 376 248 30 20 chr2 149053310 149053411 -104203172 - MIR SINE MIR 0 262 161 234 0 0 0 chr2 149053607 149053633 -104202950 + (A)n Simple_repeat Simple_repeat 1 26 0 549 242 65 0 chr2 149053711 149053835 -104202748 + MER5A DNA MER1_type 2 133 -56 2239 153 47 0 chr2 149053942 149054327 -104202256 + MER57A LTR ERV1 1 403 0 940 283 88 50 chr2 149054593 149055155 -104201428 - MLT1H1 LTR MaLR 0 555 16 1653 165 4 0 chr2 149055311 149055577 -104201006 + AluJb SINE Alu 33 299 -13 180 0 0 0 chr2 149055603 149055623 -104200960 + (TA)n Simple_repeat Simple_repeat 1 20 0 186 43 0 0 chr2 149055791 149055814 -104200769 + (T)n Simple_repeat Simple_repeat 1 23 0 203 224 0 20 chr2 149056359 149056408 -104200175 - MIR SINE MIR -58 150 103 13397 143 49 7 chr2 149056859 149058618 -104197965 + Tigger1 DNA MER2_type 1 1883 -535 224 54 54 0 chr2 149058618 149058655 -104197928 + T-rich Low_complexity Low_complexity 2 40 0 13397 143 49 7 chr2 149058655 149059214 -104197369 + Tigger1 DNA MER2_type 1883 2417 -1 21 57 0 0 chr2 149059468 149059503 -104197080 + AT_rich Low_complexity Low_complexity 1 35 0 1877 202 61 47 chr2 149060108 149060599 -104195984 - MLT1D LTR MaLR -3 502 5 1589 101 13 13 chr2 149060872 149061110 -104195473 - pTR5 LTR ERV1 -2029 409 172 334 214 31 20 chr2 149061113 149061211 -104195372 - LTR30 LTR ERV1 -80 642 544 2331 104 40 21 chr2 149061215 149061719 -104194864 - pTR5 LTR ERV1 -417 2021 1197 1244 169 0 40 chr2 149061741 149062013 -104194570 - pTR5 LTR ERV1 -1435 1003 743 2105 116 3 0 chr2 149071058 149071352 -104185231 + AluSp SINE Alu 19 313 0 541 208 115 38 chr2 149073544 149073727 -104182856 - LTR16A LTR ERVL -19 431 235 195 204 0 0 chr2 149074225 149074269 -104182314 + (TA)n Simple_repeat Simple_repeat 1 44 0 21 36 0 0 chr2 149074488 149074516 -104182067 + AT_rich Low_complexity Low_complexity 1 28 0 2207 125 0 0 chr2 149075457 149075768 -104180815 - AluSx SINE Alu -1 311 1 285 56 481 0 chr2 149076470 149076524 -104180059 - MADE1 DNA Mariner 0 80 1 188 312 64 64 chr2 149077138 149077311 -104179272 - MIR SINE MIR -29 233 61 343 337 128 40 chr2 149077692 149078327 -104178256 + L2 LINE L2 2349 3047 -225 187 278 11 100 chr2 149078438 149078528 -104178055 + L2 LINE L2 3179 3260 -12 21 0 0 0 chr2 149078797 149078818 -104177765 + AT_rich Low_complexity Low_complexity 1 21 0 35 71 0 0 chr2 149080424 149080494 -104176089 + AT_rich Low_complexity Low_complexity 1 70 0 1000 279 21 42 chr2 149081336 149081673 -104174910 - MER115 DNA AcHobo -5 688 359 535 330 35 52 chr2 149081735 149081965 -104174618 - MER115 DNA AcHobo -445 248 23 309 118 0 0 chr2 149083726 149083777 -104172806 + (TA)n Simple_repeat Simple_repeat 2 52 0 403 295 132 18 chr2 149084194 149084421 -104172162 + MLT1J LTR MaLR 259 511 0 583 324 89 41 chr2 149084599 149085038 -104171545 - L2 LINE L2 -5 3308 2849 183 320 0 0 chr2 149085034 149085084 -104171499 + L2 LINE L2 3263 3312 -1 * 210 118 0 0 chr2 149085194 149085228 -104171355 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 1895 249 30 16 chr2 149086347 149086852 -104169731 - LTR40a LTR ERVL -7 512 1 7481 157 41 9 chr2 149087522 149089200 -104167383 + L1MA8 LINE L1 3908 5774 -517 1715 164 143 8 chr2 149089200 149089577 -104167006 - MSTA LTR MaLR 0 428 1 7481 157 41 9 chr2 149089577 149090110 -104166473 + L1MA8 LINE L1 5774 6288 -3 311 226 75 32 chr2 149090192 149090285 -104166298 + MER63 DNA MER1_type 1 723 -113 339 295 85 23 chr2 149090679 149090937 -104165646 - L1MEd LINE L1 -4906 1213 940 2431 107 14 6 chr2 149091338 149091704 -104164879 - L1PB1 LINE L1 -1 6150 5782 310 127 16 16 chr2 149091704 149091767 -104164816 + (TA)n Simple_repeat Simple_repeat 1 63 0 3591 142 40 11 chr2 149091768 149091782 -104164801 - L1PB1 LINE L1 -348 5803 5791 261 57 0 0 chr2 149091782 149091817 -104164766 + (TG)n Simple_repeat Simple_repeat 2 36 0 3591 142 40 11 chr2 149091817 149092769 -104163814 - L1PB1 LINE L1 -360 5791 4812 252 343 120 39 chr2 149092862 149093294 -104163289 - L1MEd LINE L1 -5650 469 3 459 325 63 21 chr2 149093747 149093938 -104162645 + L2 LINE L2 2844 3042 -271 439 313 169 27 chr2 149093937 149094269 -104162314 + L2 LINE L2 1452 1830 -1484 * 22 70 0 0 chr2 149094287 149094330 -104162253 + AT_rich Low_complexity Low_complexity 1 43 0 214 319 14 0 chr2 149094374 149094443 -104162140 + L2 LINE L2 3203 3272 0 2854 295 111 45 chr2 149094769 149096536 -104160047 + L2 LINE L2 1313 3202 -111 1700 202 22 12 chr2 149096543 149096908 -104159675 - MLT1A1 LTR MaLR 0 365 4 203 245 41 0 chr2 149096908 149096957 -104159626 + MIR SINE MIR 199 249 -13 416 221 98 69 chr2 149097319 149097501 -104159082 - L1M2 LINE L1 -642 5649 5457 331 288 50 29 chr2 149098114 149098354 -104158229 - L1M4 LINE L1 -1428 4718 4474 798 286 86 0 chr2 149098530 149098764 -104157819 + MIR SINE MIR 7 260 -2 2284 75 6 34 chr2 149098856 149099177 -104157406 + AluSx SINE Alu 1 312 0 2194 99 10 0 chr2 149099411 149099714 -104156869 + AluSc SINE Alu 1 306 -3 316 366 27 18 chr2 149099935 149100047 -104156536 - MIR SINE MIR -64 144 32 25 31 0 0 chr2 149100603 149100635 -104155948 + AT_rich Low_complexity Low_complexity 1 32 0 820 325 91 22 chr2 149104236 149104740 -104151843 - MLT1K LTR MaLR -9 579 41 203 229 14 29 chr2 149105816 149105886 -104150697 + (TATATG)n Simple_repeat Simple_repeat 3 71 0 534 288 86 30 chr2 149105886 149106114 -104150469 - L1MC4a LINE L1 -302 5819 5605 823 19 19 0 chr2 149106114 149106219 -104150364 + (TCTA)n Simple_repeat Simple_repeat 3 109 0 534 288 86 30 chr2 149106219 149106502 -104150081 - L1MC4a LINE L1 -516 5605 5354 2326 75 7 10 chr2 149106637 149106944 -104149639 - AluY SINE Alu -5 306 1 1531 306 38 52 chr2 149107584 149108218 -104148365 + L2 LINE L2 1885 2509 -805 315 312 225 9 chr2 149108918 149109149 -104147434 + L2 LINE L2 2535 2815 -499 462 279 54 25 chr2 149109151 149109355 -104147228 + L2 LINE L2 3104 3313 0 181 316 79 40 chr2 149110027 149110103 -104146480 - L2 LINE L2 -38 3275 3197 404 296 95 29 chr2 149110149 149110392 -104146191 - MIR SINE MIR 0 262 4 1189 166 87 10 chr2 149110711 149111000 -104145583 + MER33 DNA MER1_type 6 316 -8 510 265 107 51 chr2 149111802 149112036 -104144547 + MIR SINE MIR 6 252 -10 222 217 0 0 chr2 149112674 149112720 -104143863 + T-rich Low_complexity Low_complexity 2 47 0 193 271 54 93 chr2 149113388 149113517 -104143066 - L2 LINE L2 -50 3222 3099 551 296 42 67 chr2 149113897 149114228 -104142355 - MER102b DNA MER1_type -17 324 2 200 277 0 0 chr2 149114710 149114757 -104141826 + (CA)n Simple_repeat Simple_repeat 2 48 0 4391 95 29 2 chr2 149115773 149116403 -104140180 - L1PA13 LINE L1 0 6163 5517 228 305 0 0 chr2 149116668 149116727 -104139856 + (TCTA)n Simple_repeat Simple_repeat 3 61 0 207 285 49 65 chr2 149116955 149117078 -104139505 - MER5A DNA MER1_type -18 171 51 360 0 0 0 chr2 149117849 149117889 -104138694 + (TG)n Simple_repeat Simple_repeat 2 41 0 22 0 0 0 chr2 149117889 149117911 -104138672 + AT_rich Low_complexity Low_complexity 1 22 0 935 261 25 25 chr2 149117941 149118340 -104138243 + L1ME3A LINE L1 4963 5361 -785 800 241 60 28 chr2 149118356 149118605 -104137978 + L1ME3A LINE L1 5858 6114 -56 201 244 0 0 chr2 149118602 149118643 -104137940 + (CA)n Simple_repeat Simple_repeat 2 42 0 * 197 320 0 0 chr2 149124549 149124599 -104131984 + L2 LINE L2 3244 3293 -20 449 204 23 15 chr2 149125381 149125513 -104131070 - HsTC2 DNA Tc2 -119 1779 1647 526 219 0 0 chr2 149125557 149125569 -104131014 - L1MA10 LINE L1 -41 6293 6282 516 282 56 32 chr2 149125569 149125785 -104130798 - L1ME1 LINE L1 -44 6122 5902 756 152 0 0 chr2 149125787 149125919 -104130664 + CT-rich Low_complexity Low_complexity 3 134 0 526 245 39 0 chr2 149125919 149126074 -104130509 - L1ME1 LINE L1 -265 5899 5739 241 312 147 29 chr2 149126090 149126260 -104130323 + MIR SINE MIR 57 246 -16 257 198 12 0 chr2 149135369 149135455 -104121128 + (TA)n Simple_repeat Simple_repeat 1 87 0 903 70 14 14 chr2 149137933 149138075 -104118508 + (GAAA)n Simple_repeat Simple_repeat 3 144 0 284 325 100 0 chr2 149138413 149138533 -104118050 - L2 LINE L2 0 3313 3182 1512 170 3 53 chr2 149140181 149140481 -104116102 - AluJo SINE Alu -25 287 3 716 294 57 35 chr2 149141064 149141380 -104115203 + MER102b DNA MER1_type 13 335 -6 258 295 36 36 chr2 149143912 149144024 -104112559 - MLT1L LTR MaLR -135 480 369 * 463 261 33 95 chr2 149143992 149144233 -104112350 - MLT1J LTR MaLR -193 318 93 872 319 108 45 chr2 149144291 149145016 -104111567 - L2 LINE L2 -459 2855 2086 23 0 0 0 chr2 149145301 149145324 -104111259 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 149146435 149146456 -104110127 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 149148438 149148459 -104108124 + AT_rich Low_complexity Low_complexity 1 21 0 850 314 134 28 chr2 149148715 149149110 -104107473 - MLT1G1 LTR MaLR -62 533 97 1860 195 76 10 chr2 149149597 149150084 -104106499 + Charlie1b DNA MER1_type 1 519 -4 205 379 15 0 chr2 149150198 149150264 -104106319 + L2 LINE L2 3118 3184 -88 24 0 0 0 chr2 149150611 149150635 -104105948 + AT_rich Low_complexity Low_complexity 1 24 0 807 143 8 0 chr2 149150639 149150765 -104105818 - FLAM_C SINE Alu -16 127 1 250 267 100 22 chr2 149151089 149151179 -104105404 + MER5B DNA MER1_type 1 97 -81 13115 132 25 8 chr2 149151439 149151612 -104104971 - Tigger1 DNA MER2_type 0 2418 2249 1709 171 10 24 chr2 149151612 149151910 -104104673 + AluJb SINE Alu 1 294 -18 13115 132 25 8 chr2 149151910 149152671 -104103912 - Tigger1 DNA MER2_type -169 2249 1502 2387 68 3 13 chr2 149152671 149152978 -104103605 - AluY SINE Alu -7 304 1 13115 132 25 8 chr2 149152978 149153953 -104102630 - Tigger1 DNA MER2_type -916 1502 468 1634 127 7 76 chr2 149153953 149154244 -104102339 - AluSx SINE Alu -16 296 26 13115 132 25 8 chr2 149154244 149154410 -104102173 - Tigger1 DNA MER2_type -1950 468 306 246 191 0 0 chr2 149154411 149154453 -104102130 - Tigger1 DNA MER2_type -2376 42 1 183 80 0 0 chr2 149155718 149155743 -104100840 + (T)n Simple_repeat Simple_repeat 1 25 0 1159 208 40 40 chr2 149156702 149156976 -104099607 - AluJo SINE Alu -26 286 13 209 295 27 54 chr2 149157035 149157147 -104099436 + MIR SINE MIR 113 221 -41 22 0 0 0 chr2 149157811 149157833 -104098750 + AT_rich Low_complexity Low_complexity 1 22 0 662 237 54 21 chr2 149159464 149159650 -104096933 - MIR SINE MIR 0 262 71 1021 274 104 65 chr2 149159913 149160607 -104095976 - HAL1 LINE L1 -1 2506 1840 413 36 18 0 chr2 149160607 149160662 -104095921 + (TTA)n Simple_repeat Simple_repeat 2 57 0 1964 105 4 19 chr2 149160662 149160929 -104095654 - AluSg SINE Alu -47 263 1 1021 274 104 65 chr2 149160929 149161520 -104095063 - HAL1 LINE L1 -666 1841 1170 1727 102 4 0 chr2 149161540 149161766 -104094817 - AluSx SINE Alu -83 229 3 214 207 0 73 chr2 149161860 149161942 -104094641 + T-rich Low_complexity Low_complexity 5 80 0 185 274 253 21 chr2 149162063 149162158 -104094425 + L2 LINE L2 3193 3309 -4 348 307 94 65 chr2 149162214 149162673 -104093910 - HAL1 LINE L1 -1666 841 370 2067 68 0 0 chr2 149162825 149163075 -104093508 - AluSc SINE Alu -59 250 1 209 355 65 0 chr2 149163489 149163551 -104093032 - L2 LINE L2 -39 3233 3168 267 31 0 0 chr2 149169973 149170005 -104086578 + (CA)n Simple_repeat Simple_repeat 2 33 0 534 311 56 0 chr2 149170056 149170252 -104086331 + MIR SINE MIR 48 254 -8 289 196 168 28 chr2 149170379 149170522 -104086061 + MER113 DNA MER1_type? 4 166 -355 316 231 82 16 chr2 149171284 149171394 -104085189 - MLT1J1 LTR MaLR -5 441 334 773 217 156 34 chr2 149171462 149171757 -104084826 - MLT1J2 LTR MaLR -98 352 22 246 62 0 0 chr2 149172543 149172575 -104084008 + (TC)n Simple_repeat Simple_repeat 1 32 0 541 306 60 11 chr2 149172921 149173104 -104083479 - MLT1G1 LTR MaLR -23 567 376 1101 142 25 83 chr2 149173104 149173344 -104083239 - AluJo SINE Alu -2 310 85 655 200 7 0 chr2 149173369 149173504 -104083079 - L1MA3 LINE L1 0 6305 6170 572 150 50 0 chr2 149173504 149173604 -104082979 + L1MA3 LINE L1 5904 6008 -297 1074 255 64 36 chr2 149173614 149173971 -104082612 - MLT1G1 LTR MaLR -209 386 20 1293 286 96 36 chr2 149174225 149174748 -104081835 - MLT1F1 LTR MaLR 0 567 25 2482 294 107 34 chr2 149175241 149175513 -104081070 + L2 LINE L2 1719 1970 -1343 577 181 17 17 chr2 149175513 149175629 -104080954 + L1PB4 LINE L1 6027 6142 -14 2482 294 107 34 chr2 149175629 149176284 -104080299 + L2 LINE L2 1970 2770 -543 1462 209 73 12 chr2 149176284 149176624 -104079959 - MLT1A1 LTR MaLR 0 365 5 2482 294 107 34 chr2 149176624 149176948 -104079635 + L2 LINE L2 2770 3069 -244 1361 140 8 98 chr2 149176986 149177251 -104079332 + AluSx SINE Alu 1 241 -71 750 251 78 0 chr2 149177316 149177535 -104079048 + L2 LINE L2 3073 3308 -5 299 370 47 91 chr2 149178483 149178737 -104077846 + L2 LINE L2 3011 3253 -19 53 49 0 0 chr2 149179004 149179085 -104077498 + AT_rich Low_complexity Low_complexity 1 81 0 369 43 0 0 chr2 149179483 149179530 -104077053 + (CA)n Simple_repeat Simple_repeat 2 48 0 364 362 124 28 chr2 149181400 149181879 -104074704 - L2 LINE L2 -14 3299 2776 21 0 0 0 chr2 149183263 149183284 -104073299 + AT_rich Low_complexity Low_complexity 1 21 0 184 319 103 35 chr2 149183986 149184102 -104072481 - L2 LINE L2 -1341 1973 1850 2312 102 3 0 chr2 149185237 149185541 -104071042 + AluSp SINE Alu 1 305 -8 21 36 0 0 chr2 149186946 149186974 -104069609 + AT_rich Low_complexity Low_complexity 1 28 0 541 258 0 8 chr2 149187277 149187409 -104069174 - FLAM_A SINE Alu -1 132 2 21 36 0 0 chr2 149189307 149189335 -104067248 + AT_rich Low_complexity Low_complexity 1 28 0 443 250 76 76 chr2 149190571 149190795 -104065788 + L2 LINE L2 3090 3313 0 32 0 0 0 chr2 149191317 149191349 -104065234 + AT_rich Low_complexity Low_complexity 1 32 0 415 221 98 69 chr2 149192106 149192288 -104064295 - L1M2 LINE L1 -642 5649 5457 318 375 7 0 chr2 149192300 149192444 -104064139 - L1M2 LINE L1 -772 5402 5258 327 292 50 29 chr2 149192901 149193141 -104063442 - L1M4 LINE L1 -1428 4718 4474 794 286 86 0 chr2 149193317 149193551 -104063032 + MIR SINE MIR 7 260 -2 2311 75 6 34 chr2 149193643 149193963 -104062620 + AluSx SINE Alu 1 311 -1 2229 99 10 0 chr2 149194192 149194495 -104062088 + AluSc SINE Alu 1 306 -3 311 366 27 18 chr2 149194716 149194828 -104061755 - MIR SINE MIR -64 144 32 25 31 0 0 chr2 149195384 149195416 -104061167 + AT_rich Low_complexity Low_complexity 1 32 0 827 325 91 22 chr2 149199017 149199521 -104057062 - MLT1K LTR MaLR -9 579 41 212 225 14 28 chr2 149200597 149200668 -104055915 + (TATATG)n Simple_repeat Simple_repeat 2 71 0 531 283 84 29 chr2 149200686 149200895 -104055688 - L1MC4a LINE L1 -302 5819 5623 484 15 31 0 chr2 149200895 149200960 -104055623 + (TCTA)n Simple_repeat Simple_repeat 3 69 0 531 283 84 29 chr2 149200960 149201243 -104055340 - L1MC4a LINE L1 -498 5623 5354 2334 76 7 7 chr2 149201378 149201680 -104054903 - AluY SINE Alu -9 302 1 1542 298 41 55 chr2 149202320 149202954 -104053629 + L2 LINE L2 1885 2509 -805 324 307 225 9 chr2 149203654 149203885 -104052698 + L2 LINE L2 2535 2815 -499 453 279 54 25 chr2 149203887 149204091 -104052492 + L2 LINE L2 3104 3313 0 397 296 95 29 chr2 149204885 149205128 -104051455 - MIR SINE MIR 0 262 4 1167 166 87 10 chr2 149205447 149205736 -104050847 + MER33 DNA MER1_type 6 316 -8 221 369 102 21 chr2 149205766 149205953 -104050630 + L2 LINE L2 2171 2372 -942 508 265 107 51 chr2 149206538 149206772 -104049811 + MIR SINE MIR 6 252 -10 222 217 0 0 chr2 149207410 149207456 -104049127 + T-rich Low_complexity Low_complexity 2 47 0 193 271 54 93 chr2 149208124 149208253 -104048330 - L2 LINE L2 -50 3222 3099 547 296 42 67 chr2 149208633 149208964 -104047619 - MER102b DNA MER1_type -17 324 2 200 277 0 0 chr2 149209446 149209493 -104047090 + (CA)n Simple_repeat Simple_repeat 2 48 0 186 43 0 0 chr2 149210303 149210326 -104046257 + (T)n Simple_repeat Simple_repeat 1 23 0 4393 95 29 2 chr2 149210508 149211138 -104045445 - L1PA13 LINE L1 0 6163 5517 228 305 0 0 chr2 149211403 149211462 -104045121 + (TCTA)n Simple_repeat Simple_repeat 3 61 0 209 285 49 65 chr2 149211690 149211813 -104044770 - MER5A DNA MER1_type -18 171 51 324 0 0 0 chr2 149212584 149212620 -104043963 + (TG)n Simple_repeat Simple_repeat 2 37 0 22 0 0 0 chr2 149212620 149212642 -104043941 + AT_rich Low_complexity Low_complexity 1 22 0 893 261 25 25 chr2 149212672 149213071 -104043512 + L1ME3A LINE L1 4963 5361 -785 785 241 60 28 chr2 149213087 149213336 -104043247 + L1ME3A LINE L1 5858 6114 -56 200 194 0 0 chr2 149213338 149213374 -104043209 + (CA)n Simple_repeat Simple_repeat 1 36 0 197 320 0 0 chr2 149219280 149219330 -104037253 + L2 LINE L2 3244 3293 -20 449 204 23 15 chr2 149220112 149220244 -104036339 - HsTC2 DNA Tc2 -117 1781 1649 526 219 0 0 chr2 149220288 149220300 -104036283 - L1MA10 LINE L1 -41 6293 6282 519 282 56 32 chr2 149220300 149220516 -104036067 - L1ME1 LINE L1 -44 6122 5902 753 157 0 0 chr2 149220518 149220652 -104035931 + CT-rich Low_complexity Low_complexity 2 135 0 526 245 39 0 chr2 149220653 149220808 -104035775 - L1ME1 LINE L1 -265 5899 5739 241 312 147 29 chr2 149220824 149220994 -104035589 + MIR SINE MIR 57 246 -16 483 310 69 45 chr2 149226170 149226217 -104030366 - L1M4 LINE L1 -349 5829 5785 2297 136 6 0 chr2 149226217 149226562 -104030021 + MER7A DNA MER2_type 2 346 0 483 310 69 45 chr2 149226562 149227141 -104029442 - L1M4 LINE L1 -393 5785 5187 24 0 0 0 chr2 149227271 149227295 -104029288 + AT_rich Low_complexity Low_complexity 1 24 0 1239 181 77 37 chr2 149227339 149227638 -104028945 - AluJo SINE Alu -1 311 1 272 284 119 15 chr2 149227945 149228079 -104028504 - MIR SINE MIR -2 260 113 224 233 0 27 chr2 149228340 149228413 -104028170 + CT-rich Low_complexity Low_complexity 1 71 0 236 81 0 81 chr2 149229786 149229860 -104026723 + (TTTTTG)n Simple_repeat Simple_repeat 6 73 0 2015 138 10 0 chr2 149230096 149230401 -104026182 - AluSx SINE Alu -4 308 1 272 282 111 17 chr2 149230919 149231036 -104025547 + MIR SINE MIR 21 148 -114 192 275 0 0 chr2 149231137 149231177 -104025406 + MIR SINE MIR 206 245 -17 212 366 0 0 chr2 149231512 149231583 -104025000 - L2 LINE L2 0 3313 3243 1088 37 0 7 chr2 149231984 149232120 -104024463 + L1PA7 LINE L1 5806 5940 -214 703 244 79 0 chr2 149232174 149232338 -104024245 + MER45A DNA AcHobo 2 178 0 2327 52 0 17 chr2 149232447 149232769 -104023814 + AluY SINE Alu 1 317 0 201 326 184 0 chr2 149232774 149232915 -104023668 + MIR SINE MIR 1 167 -95 270 221 0 15 chr2 149234323 149234391 -104022192 - L1ME4a LINE L1 -6 6115 6049 345 331 40 8 chr2 149234464 149234588 -104021995 - L2 LINE L2 -2 3311 3184 22 35 0 0 chr2 149234596 149234625 -104021958 + AT_rich Low_complexity Low_complexity 1 29 0 677 265 85 67 chr2 149234801 149235246 -104021337 - L1ME4a LINE L1 -282 5839 5387 25 0 0 0 chr2 149237421 149237446 -104019137 + AT_rich Low_complexity Low_complexity 1 25 0 304 274 145 8 chr2 149238213 149238330 -104018253 + MIR SINE MIR 66 198 -64 1676 206 5 30 chr2 149238796 149239164 -104017419 - MLT1A1 LTR MaLR 0 365 7 25 75 0 0 chr2 149239604 149239657 -104016926 + AT_rich Low_complexity Low_complexity 1 53 0 300 134 32 10 chr2 149239909 149239991 -104016592 - L1ME2 LINE L1 -217 5949 5866 552 296 89 47 chr2 149240285 149240774 -104015809 - L1MEc LINE L1 -4579 1817 1289 2097 131 7 0 chr2 149240774 149241072 -104015511 - AluSx SINE Alu -12 300 1 552 296 89 47 chr2 149241072 149241268 -104015315 - L1MEc LINE L1 -5107 1289 1103 230 269 52 45 chr2 149241456 149241590 -104014993 - L1MEc LINE L1 -5364 841 707 207 288 25 38 chr2 149243547 149243627 -104012956 - L2 LINE L2 -14 3258 3180 211 309 60 12 chr2 149243775 149243859 -104012724 - L2 LINE L2 -230 3042 2955 752 119 40 0 chr2 149245079 149245205 -104011378 - L1PA11 LINE L1 -1114 5032 4902 6323 87 29 0 chr2 149245205 149246329 -104010254 + L1PA11 LINE L1 5024 6173 -1 1468 170 61 22 chr2 149246329 149246641 -104009942 - L1MA7 LINE L1 -29 6262 5939 875 208 0 69 chr2 149246780 149246836 -104009747 + AluJo SINE Alu 86 144 -175 2132 147 0 0 chr2 149246836 149247148 -104009435 + AluSx SINE Alu 1 312 0 875 208 0 69 chr2 149247148 149247340 -104009243 + AluJo SINE Alu 144 319 0 243 339 114 65 chr2 149248326 149248571 -104008012 + MIR SINE MIR 2 258 -4 452 344 62 9 chr2 149253218 149253445 -104003138 + MIR SINE MIR 10 248 -14 1848 190 21 0 chr2 149254122 149254453 -104002130 + LTR32 LTR ERVL 15 352 -119 759 184 54 0 chr2 149254489 149254636 -104001947 + LTR32 LTR ERVL 317 471 0 257 293 35 78 chr2 149254776 149254892 -104001691 + L2 LINE L2 3156 3266 -6 921 282 65 47 chr2 149255081 149255528 -104001055 - L2 LINE L2 0 3313 2859 555 250 54 24 chr2 149255598 149255766 -104000817 + MIR SINE MIR 9 181 -81 206 327 48 77 chr2 149255777 149255881 -104000702 - L2 LINE L2 -6 3307 3207 24 0 0 0 chr2 149257421 149257445 -103999138 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr2 149258392 149258421 -103998162 + AT_rich Low_complexity Low_complexity 1 29 0 26 0 0 0 chr2 149258484 149258510 -103998073 + AT_rich Low_complexity Low_complexity 1 26 0 234 27 0 0 chr2 149258809 149258846 -103997737 + L1MA7 LINE L1 6255 6291 0 274 185 25 0 chr2 149260836 149260917 -103995666 + (TA)n Simple_repeat Simple_repeat 2 84 0 23 33 0 0 chr2 149264153 149264183 -103992400 + AT_rich Low_complexity Low_complexity 1 30 0 2118 106 3 47 chr2 149268453 149268775 -103987808 - AluSx SINE Alu -4 308 1 314 342 60 7 chr2 149268844 149268993 -103987590 - LTR16C LTR ERVL 0 491 335 25 51 0 0 chr2 149269456 149269495 -103987088 + AT_rich Low_complexity Low_complexity 1 39 0 367 335 71 80 chr2 149269509 149270489 -103986094 - MERVL LTR ERVL -161 5324 4353 527 274 95 0 chr2 149270549 149270717 -103985866 - MERVL LTR ERVL -1401 4253 4070 315 0 0 0 chr2 149271035 149271070 -103985513 + (T)n Simple_repeat Simple_repeat 1 35 0 421 350 6 6 chr2 149271343 149271506 -103985077 - MERVL LTR ERVL -2329 3435 3273 881 289 83 15 chr2 149271610 149272005 -103984578 - L2 LINE L2 -1551 1763 1342 21 36 0 0 chr2 149272076 149272104 -103984479 + AT_rich Low_complexity Low_complexity 1 28 0 432 290 30 30 chr2 149273049 149273180 -103983403 - MIR SINE MIR -105 157 27 327 309 21 0 chr2 149274401 149274495 -103982088 + MER5A DNA MER1_type 10 105 -84 557 249 43 22 chr2 149275170 149275355 -103981228 - MER5A DNA MER1_type 0 189 1 1820 87 0 0 chr2 149275754 149275983 -103980600 + AluSg SINE Alu 5 233 -77 263 234 31 8 chr2 149276395 149276523 -103980060 + (TTA)n Simple_repeat Simple_repeat 3 133 0 24 53 0 0 chr2 149276535 149276573 -103980010 + AT_rich Low_complexity Low_complexity 1 38 0 622 274 145 13 chr2 149276716 149277096 -103979487 + MLT1D LTR MaLR 1 430 -75 314 226 83 0 chr2 149277106 149277190 -103979393 + HERVL74 LTR ERVL 1196 1286 -4399 291 331 32 0 chr2 149277290 149277414 -103979169 + MIR SINE MIR 54 181 -81 243 0 0 0 chr2 149277422 149277449 -103979134 + (CA)n Simple_repeat Simple_repeat 2 28 0 195 42 0 0 chr2 149277448 149277472 -103979111 + (GA)n Simple_repeat Simple_repeat 2 25 0 * 2244 116 6 0 chr2 149277594 149277905 -103978678 + AluSq SINE Alu 1 313 0 1848 181 9 20 chr2 149277957 149278299 -103978284 - MLT1A1 LTR MaLR -26 339 2 264 111 0 0 chr2 149278316 149278361 -103978222 + (CA)n Simple_repeat Simple_repeat 2 46 0 873 257 85 7 chr2 149278362 149278669 -103977914 + L1M4 LINE L1 4840 5170 -976 12462 34 3 0 chr2 149278779 149280321 -103976262 + L1P LINE L1 2370 3915 -2231 22 0 0 0 chr2 149280628 149280650 -103975933 + AT_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr2 149280654 149280678 -103975905 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 4912 37 12 0 chr2 149280689 149281280 -103975303 - L1PA3 LINE L1 -20 6135 5538 1479 180 93 23 chr2 149281284 149281629 -103974954 + MSTD-int LTR MaLR 1350 1718 -17 1073 214 46 8 chr2 149281644 149281882 -103974701 + MSTD LTR MaLR 1 247 -149 689 207 33 117 chr2 149281983 149282282 -103974301 + Zaphod DNA AcHobo 387 660 -3371 1948 224 87 32 chr2 149282285 149282995 -103973588 + Zaphod DNA AcHobo 3283 4031 0 353 205 99 37 chr2 149283005 149283166 -103973417 - MER69 DNA AcHobo -110 2416 2246 324 0 0 0 chr2 149283636 149283672 -103972911 + (T)n Simple_repeat Simple_repeat 1 36 0 1005 366 56 9 chr2 149283679 149284237 -103972346 - HERVL LTR ERVL -1981 3673 3090 383 298 61 0 chr2 149284245 149284359 -103972224 + MER69 DNA AcHobo 345 465 -2061 376 191 0 0 chr2 149284396 149284464 -103972119 + MLT1H LTR MaLR 482 549 0 27 49 0 0 chr2 149285629 149285670 -103970913 + AT_rich Low_complexity Low_complexity 1 41 0 21 36 0 0 chr2 149286489 149286517 -103970066 + AT_rich Low_complexity Low_complexity 1 28 0 447 283 187 6 chr2 149286646 149286812 -103969771 - MLT1I LTR MaLR -116 293 98 292 299 11 0 chr2 149288947 149289034 -103967549 - L2 LINE L2 -1037 2277 2190 1790 108 8 4 chr2 149289702 149289960 -103966623 - AluSx SINE Alu -14 298 40 2196 92 0 3 chr2 149291199 149291504 -103965079 - AluY SINE Alu -7 304 1 1803 122 9 75 chr2 149292077 149292396 -103964187 + AluSx SINE Alu 1 298 -14 495 200 0 0 chr2 149293080 149293170 -103963413 - Tigger5 DNA MER2_type 0 2323 2234 23 54 0 0 chr2 149293401 149293438 -103963145 + AT_rich Low_complexity Low_complexity 1 37 0 21 57 0 0 chr2 149293628 149293663 -103962920 + AT_rich Low_complexity Low_complexity 1 35 0 1511 117 79 53 chr2 149294638 149294903 -103961680 + AluSx SINE Alu 31 302 -10 214 380 53 18 chr2 149296074 149296187 -103960396 - MIR SINE MIR -128 134 18 827 214 0 18 chr2 149296381 149296549 -103960034 + FRAM SINE Alu 1 165 -11 394 280 57 25 chr2 149297779 149297936 -103958647 - MLT1L LTR MaLR -57 558 397 282 279 47 40 chr2 149298027 149298242 -103958341 - MLT1L LTR MaLR -339 276 3 180 111 0 0 chr2 149298586 149298613 -103957970 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 430 277 178 20 chr2 149300739 149300941 -103955642 - MIR SINE MIR -25 237 4 24 32 0 0 chr2 149301940 149301971 -103954612 + AT_rich Low_complexity Low_complexity 1 31 0 2260 115 30 30 chr2 149302028 149302392 -103954191 - THE1B LTR MaLR 0 364 1 583 263 39 26 chr2 149302392 149302548 -103954035 - MIR SINE MIR -99 163 6 330 375 66 10 chr2 149303498 149303802 -103952781 + L2 LINE L2 2072 2392 -922 331 278 32 24 chr2 149303998 149304124 -103952459 - Charlie8 DNA MER1_type -2207 210 84 22 0 0 0 chr2 149304241 149304263 -103952320 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr2 149304882 149304905 -103951678 + AT_rich Low_complexity Low_complexity 1 23 0 279 301 50 87 chr2 149305852 149306071 -103950512 - MIR SINE MIR -50 212 2 792 226 45 0 chr2 149306466 149306621 -103949962 - Tigger3(Golem) DNA MER2_type 0 3029 2868 2153 116 10 3 chr2 149307153 149307456 -103949127 + AluSx SINE Alu 3 307 -5 255 183 21 65 chr2 149307772 149307865 -103948718 - BSR/Beta Satellite Satellite -225 154 66 560 234 58 0 chr2 149310063 149310200 -103946383 - Charlie8 DNA MER1_type -2192 225 81 186 43 0 0 chr2 149311010 149311033 -103945550 + (TCCC)n Simple_repeat Simple_repeat 2 24 0 234 0 0 0 chr2 149311646 149311672 -103944911 + (T)n Simple_repeat Simple_repeat 1 26 0 252 292 85 8 chr2 149311784 149311914 -103944669 + MIR SINE MIR 110 249 -13 231 258 30 15 chr2 149311933 149311999 -103944584 + L2 LINE L2 3247 3313 0 2147 119 10 0 chr2 149312365 149312658 -103943925 - AluSx SINE Alu -16 296 1 626 251 80 30 chr2 149313396 149313595 -103942988 - MER63A DNA MER1_type 0 210 2 319 206 0 0 chr2 149314416 149314479 -103942104 - MLT1K LTR MaLR -10 578 516 348 236 34 34 chr2 149314633 149314722 -103941861 - MLT1K LTR MaLR -325 263 175 1029 183 87 4 chr2 149314841 149315070 -103941513 - AluJo SINE Alu -20 292 45 551 196 0 0 chr2 149316317 149316414 -103940169 - L1PA16 LINE L1 -25 6141 6045 2178 68 39 36 chr2 149316751 149317059 -103939524 + AluY SINE Alu 1 309 -2 182 222 0 28 chr2 149317209 149317245 -103939338 + MIR SINE MIR 48 82 -180 511 284 28 7 chr2 149319441 149319582 -103937001 - MIR SINE MIR -85 177 34 6582 74 25 3 chr2 149319846 149321877 -103934706 + L1PA7 LINE L1 3934 6148 -6 1593 120 0 4 chr2 149321877 149322124 -103934459 + L1MA3 LINE L1 6054 6302 -3 259 100 25 0 chr2 149322309 149322349 -103934234 + MLT1E1 LTR MaLR 119 159 -495 * 1324 226 50 9 chr2 149322344 149322823 -103933760 + MLT1E1 LTR MaLR 123 653 -1 1184 153 0 19 chr2 149323052 149323261 -103933322 + AluSg/x SINE Alu 108 312 0 242 36 0 0 chr2 149323367 149323395 -103933188 + (A)n Simple_repeat Simple_repeat 1 28 0 250 393 45 9 chr2 149324676 149324788 -103931795 + L2 LINE L2 3137 3252 -20 537 128 12 0 chr2 149328073 149328159 -103928424 + AluS SINE Alu 1 87 -226 424 214 206 0 chr2 149328286 149328417 -103928166 + MER103 DNA DNA 6 163 -3 23 0 0 0 chr2 149329242 149329265 -103927318 + AT_rich Low_complexity Low_complexity 1 23 0 1302 134 0 42 chr2 149329269 149329486 -103927097 - AluJb SINE Alu -18 294 87 350 339 63 47 chr2 149330106 149330653 -103925930 - L2 LINE L2 0 3272 2716 499 293 118 24 chr2 149331281 149331493 -103925090 - MIR SINE MIR 0 262 31 390 299 58 7 chr2 149332040 149332177 -103924406 + MIR SINE MIR 31 174 -88 188 282 0 0 chr2 149332312 149332351 -103924232 - L2 LINE L2 -9 3304 3266 206 250 90 76 chr2 149332453 149332597 -103923986 + MIR3 SINE MIR 2 147 -61 25 0 0 0 chr2 149333791 149333816 -103922767 + AT_rich Low_complexity Low_complexity 1 25 0 329 316 20 71 chr2 149336073 149336326 -103920257 + L2 LINE L2 3023 3262 -51 364 266 117 53 chr2 149337966 149338154 -103918429 - L2 LINE L2 0 3313 3114 504 158 0 0 chr2 149339418 149339551 -103917032 + (CA)n Simple_repeat Simple_repeat 1 133 0 337 336 92 9 chr2 149341567 149341784 -103914799 - MIR SINE MIR -27 235 1 341 340 71 24 chr2 149342472 149342725 -103913858 + L1ME4a LINE L1 4458 4722 -1424 282 211 0 66 chr2 149342788 149342864 -103913719 + Tigger2 DNA MER2_type 3 73 -2645 519 326 11 17 chr2 149342897 149343072 -103913511 - MER8 DNA MER2_type -62 177 4 674 280 114 50 chr2 149343325 149343904 -103912679 + L1ME4a LINE L1 5501 6116 -5 340 310 0 20 chr2 149345471 149345571 -103911012 + GA-rich Low_complexity Low_complexity 4 101 0 715 219 15 63 chr2 149345614 149345819 -103910764 - MER112 DNA MER1_type 0 260 66 315 0 0 0 chr2 149345842 149345877 -103910706 + (TA)n Simple_repeat Simple_repeat 1 35 0 237 196 0 0 chr2 149345943 149345999 -103910584 + GA-rich Low_complexity Low_complexity 2 57 0 231 217 83 0 chr2 149345999 149346059 -103910524 - MER112 DNA MER1_type -192 68 4 624 332 10 15 chr2 149347800 149348005 -103908578 - MIR SINE MIR 0 262 59 250 320 41 25 chr2 149348184 149348306 -103908277 - MER5A DNA MER1_type -30 159 36 318 362 43 74 chr2 149348604 149348996 -103907587 + L2 LINE L2 2887 3266 -6 452 246 40 8 chr2 149349021 149349147 -103907436 - MER94 DNA DNA -4 130 1 389 228 22 33 chr2 149349418 149349598 -103906985 + (TA)n Simple_repeat Simple_repeat 1 178 0 436 318 150 26 chr2 149352224 149352649 -103903934 - L2 LINE L2 -259 3054 2590 21 71 0 0 chr2 149354786 149354828 -103901755 + AT_rich Low_complexity Low_complexity 1 42 0 279 313 143 41 chr2 149355729 149355876 -103900707 + L2 LINE L2 3105 3266 -6 917 250 55 34 chr2 149360605 149360841 -103895742 + MIR SINE MIR 22 262 0 252 283 0 0 chr2 149361585 149361645 -103894938 + MIR3 SINE MIR 138 197 -11 1982 132 0 10 chr2 149361820 149362109 -103894474 + AluSg SINE Alu 1 286 -24 302 259 0 37 chr2 149362308 149362416 -103894167 - L1MC4 LINE L1 -1331 6711 6608 203 261 0 0 chr2 149362416 149362462 -103894121 + (CATA)n Simple_repeat Simple_repeat 2 47 0 24 0 0 0 chr2 149363539 149363563 -103893020 + AT_rich Low_complexity Low_complexity 1 24 0 22 56 0 0 chr2 149363684 149363720 -103892863 + AT_rich Low_complexity Low_complexity 1 36 0 355 273 11 0 chr2 149364256 149364344 -103892239 - MIR SINE MIR -2 260 172 480 224 0 10 chr2 149364369 149364467 -103892116 + MER115 DNA AcHobo 590 686 -7 782 208 133 61 chr2 149365318 149365611 -103890972 - MLT1J1 LTR MaLR -2 444 131 767 335 9 0 chr2 149365883 149366110 -103890473 - MIR SINE MIR 0 262 34 1858 105 49 0 chr2 149367631 149367916 -103888667 - L1PA14 LINE L1 -1 6160 5862 27 73 0 0 chr2 149369712 149369767 -103886816 + AT_rich Low_complexity Low_complexity 1 55 0 338 272 199 22 chr2 149369790 149369926 -103886657 - MIR SINE MIR -37 225 66 428 306 117 29 chr2 149371405 149371791 -103884792 - MLT1J1 LTR MaLR 0 446 27 226 254 18 0 chr2 149372678 149372788 -103883795 + (TA)n Simple_repeat Simple_repeat 2 113 0 217 368 80 16 chr2 149373002 149373127 -103883456 + MIR SINE MIR 63 195 -67 2539 102 21 0 chr2 149373975 149374358 -103882225 + L1PA7 LINE L1 4995 5385 -761 7215 42 10 0 chr2 149374358 149375571 -103881012 + L1PA5 LINE L1 4923 6150 -4 26 30 0 0 chr2 149375651 149375684 -103880899 + AT_rich Low_complexity Low_complexity 1 33 0 5794 56 17 3 chr2 149375684 149376437 -103880146 + L1PA7 LINE L1 5388 6151 -3 257 173 19 0 chr2 149376509 149376561 -103880022 - MER116 DNA Mariner -5 75 23 22 0 0 0 chr2 149376592 149376614 -103879969 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr2 149376816 149376843 -103879740 + AT_rich Low_complexity Low_complexity 1 27 0 422 293 65 56 chr2 149377307 149377522 -103879061 + MIR SINE MIR 12 228 -34 2305 209 116 2 chr2 149377785 149378369 -103878214 - MLT1E1 LTR MaLR -3 651 1 197 270 180 47 chr2 149379281 149379437 -103877146 + MIR SINE MIR 23 216 -46 275 0 0 28 chr2 149379437 149379473 -103877110 + (CA)n Simple_repeat Simple_repeat 2 36 0 197 270 180 47 chr2 149379473 149379527 -103877056 + MIR SINE MIR 216 261 -1 207 100 0 0 chr2 149379895 149379925 -103876658 + (A)n Simple_repeat Simple_repeat 1 30 0 218 271 100 0 chr2 149380437 149380507 -103876076 + L2 LINE L2 3237 3313 0 978 159 49 0 chr2 149380627 149380790 -103875793 - MER20 DNA MER1_type 0 219 49 261 0 0 0 chr2 149380826 149380855 -103875728 + (TG)n Simple_repeat Simple_repeat 2 30 0 21 0 0 0 chr2 149381443 149381464 -103875119 + AT_rich Low_complexity Low_complexity 1 21 0 30 0 0 0 chr2 149385209 149385239 -103871344 + AT_rich Low_complexity Low_complexity 1 30 0 215 314 0 0 chr2 149385948 149386018 -103870565 + (TA)n Simple_repeat Simple_repeat 2 71 0 22 35 0 0 chr2 149386297 149386326 -103870257 + AT_rich Low_complexity Low_complexity 1 29 0 331 277 128 14 chr2 149386403 149386544 -103870039 + MER5B DNA MER1_type 3 159 -19 28 0 0 0 chr2 149386734 149386762 -103869821 + AT_rich Low_complexity Low_complexity 1 28 0 2020 133 0 3 chr2 149386762 149387071 -103869512 + AluSq SINE Alu 1 308 -5 497 291 172 0 chr2 149387208 149387359 -103869224 + MER5A DNA MER1_type 12 188 -1 201 198 28 0 chr2 149387465 149387571 -103869012 + (TA)n Simple_repeat Simple_repeat 2 110 0 263 286 31 31 chr2 149387747 149387845 -103868738 + L2 LINE L2 2591 2688 -626 445 309 73 66 chr2 149387921 149388222 -103868361 + L2 LINE L2 3008 3310 -3 1885 112 20 34 chr2 149388968 149389262 -103867321 - AluSc SINE Alu -16 293 4 234 0 0 0 chr2 149389469 149389495 -103867088 + (T)n Simple_repeat Simple_repeat 1 26 0 209 331 59 15 chr2 149389607 149389743 -103866840 + MIR SINE MIR 110 251 -11 181 288 30 15 chr2 149389756 149389822 -103866761 + L2 LINE L2 3247 3313 0 261 305 106 21 chr2 149391514 149391655 -103864928 + MIR SINE MIR 32 142 -66 2255 82 0 61 chr2 149392305 149392634 -103863949 + AluY SINE Alu 1 309 -2 418 206 71 32 chr2 149394302 149394457 -103862126 - MER103 DNA DNA -3 163 3 853 183 13 0 chr2 149394912 149395065 -103861518 + FRAM SINE Alu 1 154 -22 22 0 0 0 chr2 149395285 149395307 -103861276 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 149396443 149396464 -103860119 + AT_rich Low_complexity Low_complexity 1 21 0 210 143 0 0 chr2 149397819 149397854 -103858729 + (GAAA)n Simple_repeat Simple_repeat 3 37 0 22 0 0 0 chr2 149399323 149399345 -103857238 + AT_rich Low_complexity Low_complexity 1 22 0 30 0 0 0 chr2 149400245 149400275 -103856308 + AT_rich Low_complexity Low_complexity 1 30 0 1293 205 17 33 chr2 149401865 149402167 -103854416 + AluJo SINE Alu 1 297 -15 452 304 67 36 chr2 149402316 149402510 -103854073 + MIR3 SINE MIR 6 205 -3 21 0 0 0 chr2 149402934 149402955 -103853628 + AT_rich Low_complexity Low_complexity 1 21 0 353 393 17 38 chr2 149403463 149403753 -103852830 + L2 LINE L2 2565 2848 -466 191 327 112 72 chr2 149403848 149404099 -103852484 + L2 LINE L2 2980 3240 -32 * 1483 351 107 21 chr2 149404094 149405026 -103851557 + L2 LINE L2 1961 2972 -342 665 152 4 10 chr2 149405028 149405287 -103851296 + AluSx SINE Alu 3 304 -6 479 293 56 30 chr2 149405464 149405662 -103850921 + L2 LINE L2 3110 3312 -1 205 267 0 0 chr2 149405925 149405985 -103850598 + A-rich Low_complexity Low_complexity 1 60 0 * 208 135 0 0 chr2 149405950 149405987 -103850596 + (A)n Simple_repeat Simple_repeat 1 37 0 1541 132 85 4 chr2 149406516 149406774 -103849809 + AluSx SINE Alu 1 279 -33 225 0 0 0 chr2 149406784 149406809 -103849774 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 296 338 45 26 chr2 149407389 149407543 -103849040 + MIR SINE MIR 8 164 -98 21 0 0 0 chr2 149411151 149411172 -103845411 + AT_rich Low_complexity Low_complexity 1 21 0 225 178 0 0 chr2 149411570 149411615 -103844968 + CT-rich Low_complexity Low_complexity 1 45 0 212 344 58 39 chr2 149411616 149411770 -103844813 - MIR SINE MIR -105 157 1 1619 26 0 0 chr2 149412088 149412279 -103844304 + L1PA3 LINE L1 5961 6151 -4 21 0 0 0 chr2 149412408 149412429 -103844154 + AT_rich Low_complexity Low_complexity 1 21 0 1087 45 0 0 chr2 149412933 149413065 -103843518 - L1PA8 LINE L1 -10 6162 6031 264 224 0 0 chr2 149413202 149413269 -103843314 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 411 130 0 0 chr2 149413712 149413820 -103842763 + L1PB1 LINE L1 6070 6177 0 1691 147 6 41 chr2 149413829 149414143 -103842440 + AluJb SINE Alu 1 303 -9 217 277 15 0 chr2 149414672 149414737 -103841846 + MIR SINE MIR 187 252 -10 21 0 0 0 chr2 149414754 149414775 -103841808 + AT_rich Low_complexity Low_complexity 1 21 0 642 279 54 20 chr2 149414897 149415101 -103841482 - MIR SINE MIR -46 216 6 2327 97 0 0 chr2 149415120 149415431 -103841152 + AluY SINE Alu 1 311 0 1838 150 11 3 chr2 149416288 149416574 -103840009 - AluJo SINE Alu -24 288 1 36 0 0 0 chr2 149418450 149418486 -103838097 + AT_rich Low_complexity Low_complexity 1 36 0 180 370 0 0 chr2 149419006 149419060 -103837523 - L3 LINE CR1 -11 1566 1513 203 79 26 0 chr2 149420735 149420773 -103835810 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 411 21 0 0 chr2 149421259 149421307 -103835276 + (TG)n Simple_repeat Simple_repeat 1 48 0 235 250 174 11 chr2 149421986 149422078 -103834505 + MIR SINE MIR 1 107 -155 197 280 0 0 chr2 149422109 149422159 -103834424 - MIR SINE MIR -48 214 165 353 282 8 51 chr2 149422179 149422296 -103834287 - MER94 DNA DNA -4 130 19 249 277 15 0 chr2 149422457 149422522 -103834061 + MIR3 SINE MIR 137 202 -6 684 106 8 16 chr2 149423807 149423930 -103832653 + (TTCC)n Simple_repeat Simple_repeat 1 122 0 1869 174 38 59 chr2 149423961 149424438 -103832145 - MLT1C LTR MaLR 0 467 1 30 0 0 0 chr2 149425901 149425931 -103830652 + AT_rich Low_complexity Low_complexity 1 30 0 2190 109 16 0 chr2 149428616 149428938 -103827645 + L1PA14 LINE L1 5833 6159 -2 447 266 89 6 chr2 149429230 149429399 -103827184 - MIR SINE MIR -4 258 76 486 244 0 0 chr2 149429588 149429723 -103826860 + (CA)n Simple_repeat Simple_repeat 2 136 0 334 0 43 0 chr2 149430878 149430924 -103825659 + (TTA)n Simple_repeat Simple_repeat 2 49 0 22 0 0 0 chr2 149431774 149431796 -103824787 + AT_rich Low_complexity Low_complexity 1 22 0 336 48 0 0 chr2 149432496 149432538 -103824045 + (CA)n Simple_repeat Simple_repeat 2 43 0 22 70 0 0 chr2 149434048 149434091 -103822492 + AT_rich Low_complexity Low_complexity 1 43 0 2080 116 13 0 chr2 149435223 149435526 -103821057 + AluSg SINE Alu 1 307 -3 23 0 0 0 chr2 149436878 149436901 -103819682 + AT_rich Low_complexity Low_complexity 1 23 0 208 341 89 30 chr2 149437089 149437224 -103819359 - L2 LINE L2 -10 3303 3161 324 337 86 35 chr2 149437365 149437683 -103818900 - L2 LINE L2 -209 3063 2728 294 29 0 0 chr2 149439084 149439119 -103817464 + (TG)n Simple_repeat Simple_repeat 2 36 0 377 242 130 37 chr2 149441363 149441524 -103815059 - MIR SINE MIR -60 202 27 220 350 19 39 chr2 149441549 149441652 -103814931 + MIR3 SINE MIR 90 190 -18 21 0 0 0 chr2 149444961 149444982 -103811601 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr2 149445514 149445552 -103811031 + AT_rich Low_complexity Low_complexity 1 38 0 185 237 136 0 chr2 149446430 149446489 -103810094 - L2 LINE L2 -2 3270 3204 727 317 30 23 chr2 149447482 149447917 -103808666 - HAL1b LINE L1 -807 541 104 738 268 197 25 chr2 149448511 149448836 -103807747 - MLT1J2 LTR MaLR -47 403 23 405 0 0 0 chr2 149449760 149449805 -103806778 + (TA)n Simple_repeat Simple_repeat 2 46 0 183 156 0 0 chr2 149449978 149450010 -103806573 + CT-rich Low_complexity Low_complexity 2 33 0 42 48 0 0 chr2 149450055 149450118 -103806465 + AT_rich Low_complexity Low_complexity 1 63 0 22 0 0 0 chr2 149450584 149450606 -103805977 + AT_rich Low_complexity Low_complexity 1 22 0 2075 183 0 6 chr2 149451359 149451709 -103804874 + MER7A DNA MER2_type 1 346 0 21 95 0 0 chr2 149451749 149451812 -103804771 + AT_rich Low_complexity Low_complexity 1 63 0 42 20 0 0 chr2 149451888 149451937 -103804646 + AT_rich Low_complexity Low_complexity 1 49 0 712 228 108 85 chr2 149452278 149452585 -103803998 - L2 LINE L2 -3 3310 2997 1976 144 7 3 chr2 149452694 149452999 -103803584 + AluSx SINE Alu 1 306 -6 518 293 170 36 chr2 149453406 149454047 -103802536 - L2 LINE L2 0 3313 2554 372 258 105 38 chr2 149454365 149454702 -103801881 - L1MEd LINE L1 -4862 1257 969 1210 211 0 21 chr2 149455308 149455545 -103801038 - AluJo SINE Alu -79 233 2 360 0 0 0 chr2 149455700 149455740 -103800843 + (TG)n Simple_repeat Simple_repeat 1 40 0 23 78 0 0 chr2 149455875 149455926 -103800657 + AT_rich Low_complexity Low_complexity 1 51 0 390 328 97 32 chr2 149455932 149456273 -103800310 + L1MC/D LINE L1 3089 3451 -2695 1885 145 17 0 chr2 149456424 149456714 -103799869 + AluSx SINE Alu 1 295 -17 283 263 74 0 chr2 149457275 149457370 -103799213 + L1MC/D LINE L1 5378 5479 -2329 3115 105 0 2 chr2 149457453 149457902 -103798681 + L1PB1 LINE L1 5699 6146 -5 764 114 0 0 chr2 149457919 149458033 -103798550 + L1PA10 LINE L1 6054 6167 -1 284 262 95 63 chr2 149458103 149458229 -103798354 - L2 LINE L2 0 3313 3184 244 315 11 0 chr2 149458550 149458642 -103797941 + C-rich Low_complexity Low_complexity 3 95 0 243 88 0 0 chr2 149510535 149510569 -103746014 + (A)n Simple_repeat Simple_repeat 1 34 0 185 243 0 0 chr2 149510757 149510794 -103745789 - MIR3 SINE MIR -53 155 119 545 306 105 10 chr2 149512906 149513115 -103743468 + L2 LINE L2 2748 2976 -338 528 265 83 17 chr2 149513192 149513373 -103743210 + MIR SINE MIR 43 235 -27 1304 134 126 16 chr2 149514065 149514311 -103742272 + MSTA LTR MaLR 138 410 -18 719 271 71 25 chr2 149514953 149515193 -103741390 + MIR SINE MIR 8 258 -4 949 211 33 14 chr2 149515401 149515614 -103740969 + MER20 DNA MER1_type 2 218 -1 835 190 6 0 chr2 149516180 149516338 -103740245 + MLT1A2 LTR MaLR 216 374 0 222 338 50 38 chr2 149516355 149516515 -103740068 + L3 LINE CR1 1122 1283 -294 24 67 0 0 chr2 149517264 149517309 -103739274 + AT_rich Low_complexity Low_complexity 1 45 0 749 183 0 0 chr2 149517788 149517914 -103738669 + FLAM_C SINE Alu 1 126 -17 253 341 8 23 chr2 149518122 149518251 -103738332 + L3b LINE CR1 1267 1393 -190 302 266 116 64 chr2 149518503 149518676 -103737907 - HAL1 LINE L1 -61 2446 2265 23 0 0 0 chr2 149518853 149518876 -103737707 + AT_rich Low_complexity Low_complexity 1 23 0 3186 195 81 45 chr2 149518892 149519916 -103736667 - L1ME1 LINE L1 -4 6162 5109 336 263 0 26 chr2 149519911 149520025 -103736558 - L1MEc LINE L1 -5259 1137 1027 * 515 113 31 21 chr2 149520082 149520179 -103736404 - L1MA6 LINE L1 0 6300 6203 235 265 15 0 chr2 149520380 149520448 -103736135 + (TA)n Simple_repeat Simple_repeat 1 69 0 1222 90 24 76 chr2 149522763 149522974 -103733609 - L1PA11 LINE L1 -5 6169 5970 2487 145 26 0 chr2 149522974 149523394 -103733189 + L1P LINE L1 4890 5320 -826 180 0 0 0 chr2 149524265 149524285 -103732298 + (T)n Simple_repeat Simple_repeat 1 20 0 289 333 69 21 chr2 149526090 149526234 -103730349 - L2 LINE L2 -6 3266 3116 183 100 0 0 chr2 149527441 149527471 -103729112 + (A)n Simple_repeat Simple_repeat 1 30 0 1745 178 5 78 chr2 149529692 149530113 -103726470 - MLT1B LTR MaLR 0 390 1 23 0 0 0 chr2 149530554 149530577 -103726006 + AT_rich Low_complexity Low_complexity 1 23 0 310 258 0 0 chr2 149531223 149531289 -103725294 + L2 LINE L2 3231 3296 -17 267 31 0 0 chr2 149531865 149531897 -103724686 + (TG)n Simple_repeat Simple_repeat 1 32 0 373 259 184 35 chr2 149532000 149532177 -103724406 + MIR3 SINE MIR 8 206 -56 206 121 0 0 chr2 149534226 149534259 -103722324 + (A)n Simple_repeat Simple_repeat 1 33 0 189 0 0 0 chr2 149535108 149535129 -103721454 + (CAT)n Simple_repeat Simple_repeat 3 23 0 322 415 47 5 chr2 149536220 149536413 -103720170 + MIR3 SINE MIR 6 206 -2 2357 215 40 16 chr2 149537272 149537896 -103718687 - L1ME1 LINE L1 -271 5895 5257 450 314 49 0 chr2 149537898 149538124 -103718459 - L1ME1 LINE L1 -1240 4906 4670 721 254 52 24 chr2 149538126 149538339 -103718244 - MER58A DNA MER1_type 0 224 6 1543 256 57 15 chr2 149538346 149538943 -103717640 - L1ME1 LINE L1 -1473 4673 4052 848 306 42 31 chr2 149539043 149539429 -103717154 - MLT1K LTR MaLR -55 533 144 277 326 61 0 chr2 149539746 149539844 -103716739 - L2 LINE L2 0 3272 3169 2085 99 15 62 chr2 149539850 149540174 -103716409 + AluSq SINE Alu 2 310 -3 279 300 146 111 chr2 149540194 149540447 -103716136 + MIR SINE MIR 1 262 0 322 243 0 0 chr2 149540453 149540527 -103716056 + MIR SINE MIR 183 256 -6 22 56 0 0 chr2 149540767 149540803 -103715780 + AT_rich Low_complexity Low_complexity 1 36 0 1925 99 0 8 chr2 149541472 149541775 -103714808 - AluSq SINE Alu 0 336 36 189 371 14 0 chr2 149545137 149545207 -103711376 - L2 LINE L2 0 3272 3202 653 190 81 58 chr2 149547080 149547146 -103709437 - MER5A DNA MER1_type -6 183 120 2456 44 24 0 chr2 149547146 149547439 -103709144 + AluY SINE Alu 1 300 -11 653 190 81 58 chr2 149547439 149547546 -103709037 - MER5A DNA MER1_type -69 120 6 1951 99 3 25 chr2 149548049 149548331 -103708252 - AluSx SINE Alu -16 296 21 273 29 0 0 chr2 149548531 149548565 -103708018 + (CA)n Simple_repeat Simple_repeat 2 35 0 1695 169 89 0 chr2 149549321 149549635 -103706948 + MER7A DNA MER2_type 1 340 -6 406 255 0 0 chr2 149549981 149550075 -103706508 - L2 LINE L2 -21 3292 3199 240 35 0 0 chr2 149550830 149550859 -103705724 + (A)n Simple_repeat Simple_repeat 1 29 0 198 71 0 0 chr2 149552995 149553023 -103703560 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 270 136 0 0 chr2 149553502 149553546 -103703037 + (CTG)n Simple_repeat Simple_repeat 1 44 0 658 145 0 0 chr2 149554424 149554548 -103702035 - LTR12 LTR ERV1 0 714 355 320 169 0 0 chr2 149554548 149554613 -103701970 - LTR30 LTR ERV1 -102 620 556 1017 149 100 71 chr2 149554613 149554894 -103701689 - LTR12 LTR ERV1 -425 289 1 1599 230 3 11 chr2 149554895 149555260 -103701323 + MLT1A1 LTR MaLR 4 365 0 3988 101 12 9 chr2 149555874 149556458 -103700125 - L1PA16 LINE L1 -4 6162 5577 357 285 43 48 chr2 149556614 149556821 -103699762 + LTR33A LTR ERVL 257 462 -61 210 171 0 0 chr2 149559624 149559665 -103696918 + GA-rich Low_complexity Low_complexity 3 43 0 189 338 14 14 chr2 149560997 149561071 -103695512 + L3b LINE CR1 1354 1427 -156 1822 133 72 0 chr2 149561877 149562176 -103694407 - AluSg SINE Alu 0 318 1 1995 117 3 72 chr2 149562720 149563053 -103693530 + AluSx SINE Alu 3 312 0 195 182 0 0 chr2 149563180 149563213 -103693370 + MIR SINE MIR 118 150 -112 29 0 0 0 chr2 149563276 149563305 -103693278 + AT_rich Low_complexity Low_complexity 1 29 0 23 68 0 0 chr2 149563463 149563507 -103693076 + AT_rich Low_complexity Low_complexity 1 44 0 1967 157 130 17 chr2 149564536 149565136 -103691447 + MER39 LTR ERV1 1 707 0 598 302 16 0 chr2 149565483 149565665 -103690918 - MER5A DNA MER1_type -3 186 2 213 294 15 0 chr2 149566071 149566139 -103690444 - L2 LINE L2 -1 3271 3203 298 291 99 35 chr2 149566617 149566789 -103689794 + MER5A DNA MER1_type 1 183 -6 362 299 30 0 chr2 149567179 149567343 -103689240 - L1ME LINE L1 -391 5730 5562 458 311 26 21 chr2 149570025 149570215 -103686368 + MIR SINE MIR 14 204 -58 194 100 0 60 chr2 149570417 149570455 -103686128 + (T)n Simple_repeat Simple_repeat 1 37 -10 7719 20 0 0 chr2 149570455 149571373 -103685210 - L1PA2 LINE L1 0 6155 5237 194 100 0 60 chr2 149571373 149571384 -103685199 + (T)n Simple_repeat Simple_repeat 37 47 0 639 256 321 6 chr2 149571653 149572129 -103684454 - L1ME LINE L1 -2240 3906 3281 229 284 75 0 chr2 149572314 149572381 -103684202 + L2 LINE L2 3226 3297 -16 250 272 130 56 chr2 149572456 149572618 -103683965 - L2 LINE L2 -538 2776 2603 194 351 82 52 chr2 149573152 149573286 -103683297 - MIR3 SINE MIR -62 146 9 932 175 27 38 chr2 149573382 149573565 -103683018 + AluJo SINE Alu 40 220 -92 1043 119 80 0 chr2 149573665 149573841 -103682742 - L1PB1 LINE L1 -4 6147 5958 352 323 77 45 chr2 149573864 149574084 -103682499 + MIR SINE MIR 3 229 -33 360 0 0 0 chr2 149575465 149575505 -103681078 + (TG)n Simple_repeat Simple_repeat 2 41 0 2322 75 0 10 chr2 149575595 149575900 -103680683 + AluY SINE Alu 1 302 -9 343 337 149 11 chr2 149576734 149576909 -103679674 - MIR SINE MIR -56 206 8 417 291 30 15 chr2 149577002 149577205 -103679378 - MLT1L LTR MaLR 0 615 410 484 204 9 9 chr2 149577829 149577954 -103678629 + L1MA9 LINE L1 6174 6290 -1 1993 202 62 27 chr2 149579383 149579868 -103676715 - MLT1D LTR MaLR -2 503 2 26282 41 41 3 chr2 149580093 149583587 -103672996 + L1P LINE L1 3 3628 -2518 309 26 0 0 chr2 149583756 149583794 -103672789 + (GA)n Simple_repeat Simple_repeat 1 38 0 259 260 68 27 chr2 149585900 149586046 -103670537 + LTR33A LTR ERVL 13 164 -359 2060 121 7 0 chr2 149586927 149587236 -103669347 - AluSx SINE Alu 0 311 1 545 328 57 10 chr2 149587568 149587760 -103668823 + MIR SINE MIR 50 250 -12 273 333 17 17 chr2 149587808 149587928 -103668655 + L2 LINE L2 2214 2333 -981 461 209 31 163 chr2 149588473 149588669 -103667914 - MER5A DNA MER1_type 0 189 20 392 202 0 0 chr2 149588783 149588867 -103667716 + MER66B LTR ERV1 1 84 -402 258 226 48 0 chr2 149588869 149588931 -103667652 + MER66B LTR ERV1 422 486 0 718 260 121 0 chr2 149588932 149589155 -103667428 + MIR SINE MIR 7 256 -6 230 333 104 37 chr2 149589200 149589335 -103667248 + L2 LINE L2 3128 3271 -1 323 280 80 0 chr2 149590549 149590649 -103665934 + L2 LINE L2 3206 3313 0 180 316 70 0 chr2 149590848 149590905 -103665678 - L2 LINE L2 -38 3275 3215 218 244 217 35 chr2 149591664 149591779 -103664804 - MIR SINE MIR -30 232 97 2062 163 39 16 chr2 149593524 149593905 -103662678 - MLT1B LTR MaLR 0 390 1 1851 151 24 7 chr2 149599061 149599352 -103657231 + AluJb SINE Alu 1 296 -16 34 79 0 0 chr2 149599825 149599901 -103656682 + AT_rich Low_complexity Low_complexity 1 76 0 349 281 214 0 chr2 149600845 149601023 -103655560 - MIR SINE MIR -19 243 28 201 222 99 49 chr2 149603153 149603234 -103653349 - L2 LINE L2 -1 3271 3187 235 326 3 0 chr2 149603377 149603469 -103653114 - MIR SINE MIR -92 116 24 207 139 0 0 chr2 149604006 149604042 -103652541 + (TCTCC)n Simple_repeat Simple_repeat 5 40 0 1777 173 14 0 chr2 149604926 149605221 -103651362 + AluJo SINE Alu 1 299 -13 372 271 168 21 chr2 149605222 149605561 -103651022 - MLT1J LTR MaLR -98 413 25 1680 196 112 32 chr2 149606039 149606502 -103650081 - MLT1D LTR MaLR -4 501 2 184 301 106 53 chr2 149607112 149607225 -103649358 + L3 LINE CR1 1438 1556 -21 391 291 77 9 chr2 149607297 149607453 -103649130 + MIR SINE MIR 7 180 -28 968 319 102 42 chr2 149607466 149608084 -103648499 - L2 LINE L2 -339 2975 2321 354 316 101 21 chr2 149608416 149608653 -103647930 - L1ME4a LINE L1 -106 6015 5760 358 252 126 0 chr2 149608906 149609017 -103647566 + MIR SINE MIR 135 259 -3 400 330 107 28 chr2 149611120 149611475 -103645108 + L1ME4a LINE L1 5677 6059 -62 699 304 64 5 chr2 149611520 149611740 -103644843 + MIR SINE MIR 20 252 -10 21 36 0 0 chr2 149611808 149611836 -103644747 + AT_rich Low_complexity Low_complexity 1 28 0 247 391 63 46 chr2 149614420 149614475 -103642108 - L2 LINE L2 -4 3268 3215 950 220 51 9 chr2 149614475 149614689 -103641894 + MER58A DNA MER1_type 1 223 -1 247 391 63 46 chr2 149614689 149614871 -103641712 - L2 LINE L2 -57 3215 3027 1552 196 18 4 chr2 149615121 149615397 -103641186 + AluJo SINE Alu 1 280 -32 185 0 0 39 chr2 149615399 149615425 -103641158 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 783 364 58 44 chr2 149615437 149616148 -103640435 - L2 LINE L2 -558 2756 2036 350 267 108 17 chr2 149616379 149616499 -103640084 + L2 LINE L2 3182 3312 -1 2506 106 6 14 chr2 149616578 149616936 -103639647 - THE1A LTR MaLR 0 355 1 11894 87 8 2 chr2 149616936 149618507 -103638076 - THE1A-int LTR MaLR 0 1580 1 976 81 0 15 chr2 149618507 149618643 -103637940 - THE1A LTR MaLR 0 355 222 474 288 131 0 chr2 149619903 149620063 -103636520 + MIR SINE MIR 20 200 -62 310 272 148 6 chr2 149621993 149622162 -103634421 - MER117 DNA MER1_type -3 194 2 25 51 0 0 chr2 149622357 149622396 -103634187 + AT_rich Low_complexity Low_complexity 1 39 0 376 356 6 25 chr2 149622557 149622717 -103633866 - MIR3 SINE MIR -32 176 20 2738 160 36 29 chr2 149623778 149623824 -103632759 - L1MC2 LINE L1 -11 6333 6289 1441 63 5 39 chr2 149623824 149624029 -103632554 + L1PA8 LINE L1 5971 6168 -4 2738 160 36 29 chr2 149624029 149624569 -103632014 - L1MC2 LINE L1 -55 6289 5743 189 227 15 76 chr2 149626623 149626689 -103629894 + MIR SINE MIR 48 109 -153 364 287 0 10 chr2 149626690 149626791 -103629792 + MER5B DNA MER1_type 2 101 -77 1989 145 0 3 chr2 149626921 149627218 -103629365 + AluSq SINE Alu 1 296 -17 372 315 45 19 chr2 149627235 149627407 -103629176 - MIR SINE MIR -36 172 33 448 322 40 17 chr2 149627415 149627589 -103628994 + MER5B DNA MER1_type 1 178 0 706 274 68 15 chr2 149627857 149628193 -103628390 - LTR16A LTR ERVL -81 369 16 672 330 35 0 chr2 149628783 149629041 -103627542 - HERV16 LTR ERVL -3417 1579 1313 766 274 48 35 chr2 149629057 149629367 -103627216 - HERV16 LTR ERVL -4681 315 2 615 316 80 34 chr2 149629375 149629619 -103626964 - LTR16A LTR ERVL -7 443 171 1761 158 3 27 chr2 149629619 149629911 -103626672 + AluJo SINE Alu 1 285 -27 615 316 80 34 chr2 149629911 149630077 -103626506 - LTR16A LTR ERVL -279 171 14 508 261 8 37 chr2 149630974 149631108 -103625475 - L2 LINE L2 -9 3304 3175 229 227 373 0 chr2 149631901 149631976 -103624607 - L3 LINE CR1 -49 1528 1426 335 200 130 0 chr2 149632051 149632151 -103624432 + L1ME4a LINE L1 5985 6097 -24 252 327 234 18 chr2 149632155 149632433 -103624150 - L3 LINE CR1 -144 1433 1096 2018 127 35 0 chr2 149632456 149632739 -103623844 + AluSx SINE Alu 1 293 -19 312 305 19 19 chr2 149633760 149633865 -103622718 + MIR SINE MIR 37 141 -67 1949 150 0 7 chr2 149633990 149634284 -103622299 + AluSx SINE Alu 1 292 -20 195 129 0 0 chr2 149634285 149634316 -103622267 + (CATA)n Simple_repeat Simple_repeat 2 32 0 529 254 30 73 chr2 149634755 149635058 -103621525 + L1MC4a LINE L1 5679 5968 -153 827 222 16 22 chr2 149635533 149635718 -103620865 + MER5A DNA MER1_type 4 187 -2 801 218 10 21 chr2 149635756 149635949 -103620634 - MER20 DNA MER1_type 0 219 29 402 244 196 18 chr2 149636362 149636591 -103619992 + L2 LINE L2 2839 3108 -205 * 442 281 7 22 chr2 149636560 149636699 -103619884 + MER5B DNA MER1_type 7 143 -35 613 268 64 27 chr2 149636712 149636932 -103619651 + L2 LINE L2 3086 3313 0 400 217 11 0 chr2 149639468 149639560 -103617023 + MER103 DNA DNA 55 147 -19 607 199 30 0 chr2 149640353 149640599 -103615984 + (TA)n Simple_repeat Simple_repeat 1 253 0 39 0 0 0 chr2 149640793 149640832 -103615751 + AT_rich Low_complexity Low_complexity 1 39 0 342 0 0 0 chr2 149641873 149641911 -103614672 + (TG)n Simple_repeat Simple_repeat 1 38 0 457 254 97 0 chr2 149642578 149642712 -103613871 + MIR SINE MIR 79 225 -37 3719 158 54 21 chr2 149642914 149643623 -103612960 + MER44D DNA MER2_type 1 604 -1 242 324 157 0 chr2 149644484 149644586 -103611997 - L2 LINE L2 0 3272 3155 375 347 49 7 chr2 149647285 149647429 -103609154 - L2 LINE L2 -11 3261 3112 181 309 106 11 chr2 149647432 149647526 -103609057 + L2 LINE L2 3167 3269 -3 183 385 89 17 chr2 149647617 149647796 -103608787 - L2 LINE L2 -201 3071 2880 728 210 20 60 chr2 149648780 149649028 -103607555 - MER102a DNA MER1_type 0 330 93 194 179 36 54 chr2 149649186 149649242 -103607341 + MIR SINE MIR 76 130 -78 647 292 81 8 chr2 149650044 149650280 -103606303 - MIR SINE MIR -5 257 5 480 194 148 19 chr2 149651790 149651945 -103604638 - MIR SINE MIR -3 259 85 2393 87 3 49 chr2 149651945 149652311 -103604272 - THE1A LTR MaLR 0 355 7 394 203 55 110 chr2 149653954 149654117 -103602466 - L2 LINE L2 -1 3312 3159 2287 80 27 3 chr2 149654259 149654558 -103602025 + AluSq SINE Alu 1 306 -7 2329 52 16 3 chr2 149655080 149655385 -103601198 - AluY SINE Alu -2 309 1 27 49 0 0 chr2 149655537 149655578 -103601005 + AT_rich Low_complexity Low_complexity 1 41 0 329 289 0 44 chr2 149656632 149656791 -103599792 + GA-rich Low_complexity Low_complexity 4 155 0 21 0 0 0 chr2 149661822 149661843 -103594740 + AT_rich Low_complexity Low_complexity 1 21 0 669 284 94 50 chr2 149662966 149663139 -103593444 + MLT1J2 LTR MaLR 50 214 -236 369 0 0 0 chr2 149663139 149663180 -103593403 + (CA)n Simple_repeat Simple_repeat 1 41 0 669 284 94 50 chr2 149663180 149663387 -103593196 + MLT1J2 LTR MaLR 214 447 -3 492 280 19 25 chr2 149663801 149663958 -103592625 - L2 LINE L2 0 3313 3158 307 240 165 50 chr2 149665452 149665573 -103591010 - L3b LINE CR1 -12 1571 1437 1916 173 3 0 chr2 149666647 149666947 -103589636 + AluJb SINE Alu 1 301 -11 258 105 0 0 chr2 149668507 149668545 -103588038 + (CA)n Simple_repeat Simple_repeat 2 39 0 212 222 0 16 chr2 149670641 149670704 -103585879 + (TA)n Simple_repeat Simple_repeat 1 62 0 181 317 41 65 chr2 149671152 149671275 -103585308 + MIR3 SINE MIR 88 207 -1 200 303 0 73 chr2 149671501 149671610 -103584973 + MIR SINE MIR 116 216 -46 216 254 42 28 chr2 149673461 149673532 -103583051 + MIR3 SINE MIR 4 75 -133 297 210 116 80 chr2 149674268 149674406 -103582177 - MER103 DNA DNA 0 166 24 380 152 10 61 chr2 149675109 149675208 -103581375 + MER103 DNA DNA 24 117 -49 268 237 34 79 chr2 149675474 149675563 -103581020 - MIR SINE MIR -62 146 70 258 295 133 40 chr2 149676881 149677088 -103579495 + L2 LINE L2 2782 3006 -307 297 0 0 0 chr2 149677453 149677486 -103579097 + (CA)n Simple_repeat Simple_repeat 2 34 0 255 182 0 0 chr2 149677551 149677595 -103578988 - L2 LINE L2 -2 3311 3268 262 133 44 0 chr2 149677598 149677643 -103578940 - L2 LINE L2 0 3313 3267 519 267 15 30 chr2 149677645 149677780 -103578803 - L2 LINE L2 0 3313 3181 255 261 76 43 chr2 149678303 149678395 -103578188 - MIR SINE MIR -76 186 92 1844 118 127 135 chr2 149678531 149679050 -103577533 + MLT2B2 LTR ERVL 1 515 0 460 271 29 19 chr2 149679051 149679298 -103577285 - MLT1J2 LTR MaLR -139 367 28 483 231 26 17 chr2 149679399 149679516 -103577067 - FLAM_C SINE Alu -15 118 1 1189 108 0 17 chr2 149679632 149679861 -103576722 + (GGGA)n Simple_repeat Simple_repeat 4 226 0 192 97 0 0 chr2 149686786 149686817 -103569766 + (TTG)n Simple_repeat Simple_repeat 2 32 0 21 36 0 0 chr2 149686947 149686975 -103569608 + AT_rich Low_complexity Low_complexity 1 28 0 645 268 7 0 chr2 149688208 149688350 -103568233 + L2 LINE L2 2922 3064 -249 1795 240 35 15 chr2 149688367 149688825 -103567758 + MLT2B2 LTR ERVL 3 469 -46 455 30 0 45 chr2 149688825 149688891 -103567692 + (TC)n Simple_repeat Simple_repeat 1 63 0 306 0 0 0 chr2 149688891 149688925 -103567658 + (TA)n Simple_repeat Simple_repeat 1 34 0 362 0 0 59 chr2 149688925 149688976 -103567607 + (GA)n Simple_repeat Simple_repeat 1 48 0 359 23 0 0 chr2 149688976 149689019 -103567564 + MLT2B2 LTR ERVL 512 554 0 561 241 110 33 chr2 149689024 149689269 -103567314 + L2 LINE L2 3049 3312 -1 531 323 45 15 chr2 149689342 149689540 -103567043 + MIR3 SINE MIR 4 207 -1 198 0 0 0 chr2 149690385 149690407 -103566176 + (A)n Simple_repeat Simple_repeat 1 22 0 243 260 13 13 chr2 149691037 149691114 -103565469 + CT-rich Low_complexity Low_complexity 1 77 0 1231 183 85 51 chr2 149691153 149691448 -103565135 + AluJo SINE Alu 1 305 -7 207 88 0 0 chr2 149692398 149692432 -103564151 + (T)n Simple_repeat Simple_repeat 1 34 0 1654 255 66 31 chr2 149692696 149693315 -103563268 + L1MC4a LINE L1 7168 7808 0 227 315 11 22 chr2 149693657 149693746 -103562837 + L2 LINE L2 3184 3271 -1 2062 153 39 3 chr2 149693965 149694351 -103562232 + L1MC3 LINE L1 7365 7764 -21 1363 167 0 4 chr2 149694407 149694634 -103561949 - AluJo SINE Alu 0 312 87 205 214 0 0 chr2 149694849 149694891 -103561692 + MIR SINE MIR 192 233 -29 1942 170 3 0 chr2 149696508 149696808 -103559775 - AluJb SINE Alu -11 301 1 438 301 123 50 chr2 149696929 149697407 -103559176 + L1ME4a LINE L1 5606 6118 -3 184 253 63 84 chr2 149698580 149698675 -103557908 + L3 LINE CR1 293 385 -1192 229 243 200 0 chr2 149698993 149699063 -103557520 - L2 LINE L2 -21 3251 3168 814 202 159 14 chr2 149699085 149699507 -103557076 - MLT1F1 LTR MaLR 0 567 16 357 281 142 22 chr2 149699567 149699956 -103556627 + MLT1F LTR MaLR 118 537 -5 202 275 290 0 chr2 149700007 149700076 -103556507 + L2 LINE L2 3183 3271 -42 * 306 312 28 9 chr2 149700071 149700180 -103556403 + L2 LINE L2 2606 2716 -598 2395 63 0 0 chr2 149700316 149700631 -103555952 - AluY SINE Alu 0 315 1 392 292 62 0 chr2 149700651 149700764 -103555819 + L2 LINE L2 3180 3299 -14 776 177 0 0 chr2 149701096 149701220 -103555363 - FLAM_A SINE Alu -5 128 5 21 0 0 0 chr2 149701635 149701656 -103554927 + AT_rich Low_complexity Low_complexity 1 21 0 767 264 58 11 chr2 149701990 149702164 -103554419 - MER5A DNA MER1_type -6 183 2 380 256 18 139 chr2 149702164 149702341 -103554242 - MIR3 SINE MIR -56 152 3 189 235 0 39 chr2 149703446 149703497 -103553086 - L2 LINE L2 -4 3268 3220 41050 30 21 1 chr2 149703550 149709581 -103547002 + L1HS LINE L1 1 6155 0 987 325 102 14 chr2 149710201 149711547 -103545036 + L1ME3A LINE L1 3145 4609 -1537 1867 248 123 16 chr2 149711556 149711625 -103544958 + L1MDa LINE L1 -139 4294967217 -6461 261 0 0 0 chr2 149711625 149711654 -103544929 + (CA)n Simple_repeat Simple_repeat 2 30 0 1867 248 123 16 chr2 149711654 149712212 -103544371 + L1MDa LINE L1 -79 555 -5827 1789 157 30 32 chr2 149712211 149712613 -103543970 + L1MD1 LINE L1 5563 5963 -279 * 996 219 21 59 chr2 149712641 149713016 -103543567 + L1MDa LINE L1 655 1015 -5265 926 199 13 0 chr2 149713016 149713167 -103543416 + FAM SINE Alu 12 164 -21 2636 215 58 27 chr2 149713184 149713996 -103542587 + L1MDa LINE L1 1008 1838 -4546 361 319 78 6 chr2 149714014 149714334 -103542249 + L1ME3A LINE L1 4796 5138 -1008 872 184 0 0 chr2 149714397 149714538 -103542045 + AluJb SINE Alu 2 142 -170 1137 279 66 22 chr2 149714565 149714750 -103541833 + L1ME3A LINE L1 5318 5493 -677 535 88 0 12 chr2 149714750 149714830 -103541753 + MADE1 DNA Mariner 2 80 0 1137 279 66 22 chr2 149714830 149715247 -103541336 + L1ME3A LINE L1 5493 5947 -223 298 235 0 31 chr2 149716476 149716574 -103540009 - HERV16 LTR ERVL -86 4910 4816 2160 144 87 22 chr2 149716585 149716989 -103539594 - MSTB1 LTR MaLR -2 430 1 422 337 15 10 chr2 149717264 149717466 -103539117 - HERV16 LTR ERVL -3494 1502 1300 342 0 0 0 chr2 149718809 149718847 -103537736 + (TG)n Simple_repeat Simple_repeat 2 39 0 23 68 0 0 chr2 149719198 149719242 -103537341 + AT_rich Low_complexity Low_complexity 1 44 0 23 33 0 0 chr2 149719461 149719491 -103537092 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 149720005 149720026 -103536557 + AT_rich Low_complexity Low_complexity 1 21 0 267 31 0 0 chr2 149721072 149721104 -103535479 + (TGG)n Simple_repeat Simple_repeat 3 34 0 2140 87 0 0 chr2 149721901 149722199 -103534384 + AluY SINE Alu 5 302 0 236 294 67 34 chr2 149722454 149722573 -103534010 + L3 LINE CR1 1415 1537 -40 1801 132 3 7 chr2 149722649 149722944 -103533639 + L1MA4A LINE L1 6006 6299 -4 23 0 0 0 chr2 149723524 149723547 -103533036 + AT_rich Low_complexity Low_complexity 1 23 0 209 358 28 9 chr2 149724256 149724365 -103532218 + MIR SINE MIR 43 153 -109 788 230 16 26 chr2 149724991 149725101 -103531482 - MIR SINE MIR 0 262 153 429 160 13 0 chr2 149725101 149725176 -103531407 + MER116 DNA Mariner 3 78 -2 788 230 16 26 chr2 149725176 149725256 -103531327 - MIR SINE MIR -109 153 74 1175 157 70 35 chr2 149725412 149725642 -103530941 + MER8 DNA MER2_type 2 239 0 971 279 170 24 chr2 149725643 149726325 -103530258 + L2 LINE L2 2535 3313 0 2325 104 0 3 chr2 149726764 149727072 -103529511 - AluSg SINE Alu -3 307 1 601 319 119 8 chr2 149727507 149727867 -103528716 - L1ME4a LINE L1 -209 5912 5513 352 147 44 0 chr2 149728781 149728849 -103527734 - MLT1J2 LTR MaLR -14 436 366 584 227 87 22 chr2 149728965 149729150 -103527433 - MLT1J2 LTR MaLR -245 205 9 4003 178 60 28 chr2 149729324 149730158 -103526425 + MER21B LTR ERV1 3 863 0 1085 189 163 51 chr2 149730515 149730865 -103525718 + MLT1B LTR MaLR 1 389 -1 1790 143 18 11 chr2 149731018 149731298 -103525285 - AluJb SINE Alu -20 292 11 27 49 0 0 chr2 149732659 149732700 -103523883 + AT_rich Low_complexity Low_complexity 1 41 0 1549 185 121 11 chr2 149733328 149733776 -103522807 + LTR54B LTR ERV1 1 497 -1 2222 48 0 7 chr2 149735424 149735697 -103520886 - AluY SINE Alu -9 302 32 368 350 56 17 chr2 149737070 149737250 -103519333 + L1MEd LINE L1 6 192 -5927 420 271 60 77 chr2 149737451 149737944 -103518639 + L1MEd LINE L1 595 1080 -5039 725 181 0 30 chr2 149737944 149738077 -103518506 + FLAM_A SINE Alu 5 133 0 420 271 60 77 chr2 149738077 149738132 -103518451 + L1MEd LINE L1 1080 1134 -4985 491 286 78 65 chr2 149738135 149738568 -103518015 + L1MEd LINE L1 1238 1676 -4453 442 333 40 17 chr2 149739133 149739307 -103517276 + MIR3 SINE MIR 3 180 -28 2204 124 7 7 chr2 149739547 149739853 -103516730 + AluSx SINE Alu 1 306 -6 585 165 0 0 chr2 149739855 149739952 -103516631 + HY3 scRNA scRNA 3 99 -2 248 0 0 30 chr2 149739952 149739985 -103516598 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 912 220 0 0 chr2 149740467 149740640 -103515943 - FAM SINE Alu -1 48 1 2109 130 7 0 chr2 149740983 149741311 -103515272 + AluSq SINE Alu 2 331 0 583 319 103 35 chr2 149741945 149742315 -103514268 - L2 LINE L2 0 3313 2919 2080 158 29 30 chr2 149742805 149743285 -103513298 - MLT2D LTR ERVL -2 462 1 3499 169 34 10 chr2 149743569 149744256 -103512327 - MER39 LTR ERV1 -4 703 1 585 282 93 23 chr2 149744431 149744647 -103511936 + MIR SINE MIR 31 261 -1 1769 125 23 7 chr2 149744837 149745142 -103511441 + L1MA9 LINE L1 5998 6307 -5 480 303 32 27 chr2 149747397 149747585 -103508998 + MIR SINE MIR 6 194 -68 337 335 47 4 chr2 149747633 149747890 -103508693 - L1ME LINE L1 -333 5788 5521 23 0 0 0 chr2 149748638 149748661 -103507922 + AT_rich Low_complexity Low_complexity 1 23 0 188 365 27 40 chr2 149750391 149750540 -103506043 - MIR3 SINE MIR -51 157 57 823 107 0 16 chr2 149750837 149750959 -103505624 - FLAM_C SINE Alu -1 142 23 2156 99 3 0 chr2 149751148 149751456 -103505127 + AluSp SINE Alu 1 309 0 3629 124 28 88 chr2 149751496 149752253 -103504330 + MER50 LTR ERV1 1 711 -23 259 347 27 0 chr2 149753142 149753217 -103503366 + L2 LINE L2 3186 3262 -10 324 0 0 0 chr2 149753520 149753556 -103503027 + (TG)n Simple_repeat Simple_repeat 2 37 0 431 242 159 22 chr2 149753656 149753967 -103502616 - L1ME LINE L1 -341 5780 5423 1154 164 152 42 chr2 149754796 149755106 -103501477 - MER2 DNA MER2_type 0 344 1 1456 234 64 92 chr2 149755124 149755700 -103500883 - MLT1E LTR MaLR -26 567 8 393 75 0 0 chr2 149757334 149757387 -103499196 + (TCCA)n Simple_repeat Simple_repeat 4 56 0 758 162 42 28 chr2 149758289 149758431 -103498152 - FAM SINE Alu -15 170 27 2032 243 260 13 chr2 149758643 149759169 -103497414 - L1MC4 LINE L1 -180 7862 7467 1119 208 71 74 chr2 149759169 149759535 -103497048 - MLT1A1 LTR MaLR 0 365 1 2032 243 260 13 chr2 149759535 149760134 -103496449 - L1MC4 LINE L1 -575 7467 6459 303 27 0 0 chr2 149760636 149760673 -103495910 - MLT2B3 LTR ERVL 0 553 517 290 224 15 0 chr2 149760673 149760703 -103495880 - Ricksha DNA DNA -1143 903 836 2851 145 9 68 chr2 149760703 149761029 -103495554 - MLT2B3 LTR ERVL -40 514 170 2054 152 33 30 chr2 149761029 149761392 -103495191 + THE1B LTR MaLR 1 364 0 11311 103 10 4 chr2 149761393 149762961 -103493622 + THE1B-int LTR MaLR 2 1578 -2 1994 126 43 65 chr2 149762963 149763335 -103493248 + THE1B LTR MaLR 1 364 0 2851 145 9 68 chr2 149763335 149763549 -103493034 - MLT2B3 LTR ERVL -385 169 1 584 276 44 20 chr2 149763550 149763843 -103492740 - L1MEd LINE L1 -3420 2709 2410 6318 61 10 46 chr2 149763892 149765155 -103491428 - SVA Other Other -520 1386 433 746 264 88 48 chr2 149765179 149765926 -103490657 - L1MEd LINE L1 -4863 1256 574 379 278 77 24 chr2 149766206 149766375 -103490208 + MER5B DNA MER1_type 1 178 0 382 252 192 53 chr2 149766440 149766591 -103489992 - MER5B DNA MER1_type 0 178 7 342 239 68 0 chr2 149766606 149766694 -103489889 - MER102b DNA MER1_type 0 341 248 246 233 0 0 chr2 149766833 149766893 -103489690 + (TATG)n Simple_repeat Simple_repeat 4 63 0 202 179 36 0 chr2 149767265 149767321 -103489262 + (TTATA)n Simple_repeat Simple_repeat 5 62 0 693 266 25 55 chr2 149767788 149768025 -103488558 + MIR SINE MIR 12 241 -21 240 254 0 30 chr2 149769015 149769082 -103487501 - L2 LINE L2 -181 3091 3027 234 275 55 73 chr2 149770093 149770202 -103486381 + L2 LINE L2 3182 3288 -25 21 36 0 0 chr2 149770665 149770693 -103485890 + AT_rich Low_complexity Low_complexity 1 28 0 2044 190 115 117 chr2 149771204 149772032 -103484551 - LTR1B LTR ERV1 0 826 1 2568 46 0 3 chr2 149772767 149773071 -103483512 + AluY SINE Alu 1 303 -8 556 314 65 15 chr2 149773229 149773442 -103483141 - MIR SINE MIR 0 262 38 1865 167 23 0 chr2 149773662 149773961 -103482622 - AluSx SINE Alu -6 306 1 2333 108 0 13 chr2 149774005 149774320 -103482263 + AluSq SINE Alu 1 311 -2 184 266 47 31 chr2 149776064 149776128 -103480455 - L2 LINE L2 -54 3218 3154 2398 85 24 3 chr2 149776174 149776515 -103480068 + L1PA11 LINE L1 5824 6171 -3 288 182 0 0 chr2 149776706 149776761 -103479822 + L1MC/D LINE L1 5704 5758 -2050 308 274 0 106 chr2 149776938 149777117 -103479466 + HAL1b LINE L1 1186 1345 -3 22 0 0 0 chr2 149777120 149777142 -103479441 + AT_rich Low_complexity Low_complexity 1 22 0 875 176 23 73 chr2 149777170 149777431 -103479152 - L1MDb LINE L1 -4995 1414 1167 189 179 36 54 chr2 149778440 149778496 -103478087 - MIR SINE MIR -72 136 82 344 193 52 104 chr2 149779489 149779624 -103476959 - MIR SINE MIR -74 188 61 180 333 0 0 chr2 149780500 149780545 -103476038 + L2 LINE L2 3211 3255 -17 204 178 0 22 chr2 149780564 149780609 -103475974 - L2 LINE L2 -1 3312 3269 371 244 127 81 chr2 149780619 149781019 -103475564 - MLT1J2 LTR MaLR -7 402 2 212 315 0 41 chr2 149781025 149781098 -103475485 - L2 LINE L2 -53 3219 3150 184 77 0 0 chr2 149781263 149781289 -103475294 + L2 LINE L2 3285 3310 -3 894 285 93 4 chr2 149781790 149782317 -103474266 - L1ME4a LINE L1 -27 6094 5521 2579 40 3 0 chr2 149782731 149783031 -103473552 - AluY SINE Alu -10 301 1 23 0 0 0 chr2 149784074 149784097 -103472486 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr2 149785407 149785436 -103471147 + AT_rich Low_complexity Low_complexity 1 29 0 232 372 18 9 chr2 149786712 149786825 -103469758 + L2 LINE L2 2826 2939 -333 539 290 8 0 chr2 149787013 149787137 -103469446 + L2 LINE L2 3148 3272 0 320 250 98 36 chr2 149788574 149788686 -103467897 - MIR SINE MIR -21 241 123 2236 114 0 0 chr2 149788909 149789206 -103467377 + AluSx SINE Alu 1 297 -15 336 276 129 12 chr2 149789309 149789479 -103467104 - MIR SINE MIR -2 260 71 245 248 74 81 chr2 149789808 149789957 -103466626 - MIR3 SINE MIR -6 202 55 321 374 26 0 chr2 149790017 149790132 -103466451 - L2 LINE L2 -3 3269 3152 686 276 22 11 chr2 149790175 149790360 -103466223 - MIR SINE MIR 0 262 76 539 215 0 9 chr2 149790480 149790587 -103465996 + Tigger7 DNA MER2_type 2381 2486 -1 1133 170 9 36 chr2 149790749 149790973 -103465610 + MER20 DNA MER1_type 2 219 0 301 324 70 42 chr2 149792247 149792389 -103464194 - L2 LINE L2 0 3272 3127 499 296 51 0 chr2 149793288 149793464 -103463119 - MIR SINE MIR -13 249 65 369 267 181 9 chr2 149795436 149795541 -103461042 + MIR SINE MIR 24 146 -62 355 104 15 15 chr2 149795719 149795786 -103460797 - L1PA16 LINE L1 -2 6164 6098 571 179 133 46 chr2 149796409 149796604 -103459979 + MER112 DNA MER1_type 6 217 -43 277 302 94 9 chr2 149796971 149797077 -103459506 - MIR SINE MIR -14 248 134 255 103 0 0 chr2 149797736 149797775 -103458808 + (A)n Simple_repeat Simple_repeat 1 39 0 186 146 36 18 chr2 149800066 149800121 -103456462 + (TA)n Simple_repeat Simple_repeat 2 57 0 21 0 0 0 chr2 149801760 149801781 -103454802 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr2 149806525 149806555 -103450028 + AT_rich Low_complexity Low_complexity 1 30 0 200 218 18 0 chr2 149808574 149808629 -103447954 + CT-rich Low_complexity Low_complexity 1 56 0 239 130 0 22 chr2 149808629 149808675 -103447908 + (TTCC)n Simple_repeat Simple_repeat 2 46 0 2437 44 0 20 chr2 149811796 149812123 -103444460 + AluY SINE Alu 1 311 0 207 0 0 0 chr2 149812277 149812300 -103444283 + (TG)n Simple_repeat Simple_repeat 1 23 0 198 176 0 0 chr2 149814554 149814588 -103441995 - MIR SINE MIR -120 142 109 2457 66 0 3 chr2 149814844 149815145 -103441438 - AluY SINE Alu -9 302 3 322 206 61 69 chr2 149815299 149815430 -103441153 - MIR3 SINE MIR -37 171 42 192 300 0 33 chr2 149816342 149816402 -103440181 - L2 LINE L2 -340 2974 2917 338 281 133 102 chr2 149819020 149819674 -103436909 + L1M2 LINE L1 678 1351 -5498 196 256 85 61 chr2 149824436 149824518 -103432065 - MIR3 SINE MIR -112 96 13 1790 157 21 11 chr2 149825274 149825560 -103431023 + AluJo SINE Alu 1 289 -23 2379 50 0 99 chr2 149825803 149826146 -103430437 - AluY SINE Alu -2 309 1 402 261 44 3 chr2 149826384 149826585 -103429998 - MLT1L LTR MaLR -9 606 343 288 258 106 15 chr2 149827888 149828020 -103428563 - MLT1K LTR MaLR 0 588 445 794 204 12 4 chr2 149828030 149828289 -103428294 + CT-rich Low_complexity Low_complexity 1 261 0 1000 296 86 37 chr2 149828689 149829315 -103427268 + HsTC2 DNA Tc2 235 891 -1007 324 290 58 83 chr2 149829508 149829932 -103426651 + MLT1H LTR MaLR 47 545 -4 388 322 89 39 chr2 149830098 149830278 -103426305 - L2 LINE L2 -199 3073 2885 2036 144 60 3 chr2 149830334 149830701 -103425882 + MLT1B LTR MaLR 1 388 -2 451 258 154 42 chr2 149830740 149831046 -103425537 - L2 LINE L2 -580 2734 2395 1811 282 85 55 chr2 149831086 149831333 -103425250 + L1MEd LINE L1 4 242 -5877 2369 82 0 7 chr2 149831333 149831637 -103424946 + AluY SINE Alu 1 302 -9 1811 282 85 55 chr2 149831637 149832382 -103424201 + L1MEd LINE L1 242 1025 -5094 286 239 26 43 chr2 149832392 149832509 -103424074 + (CATATA)n Simple_repeat Simple_repeat 4 118 0 253 331 45 0 chr2 149832586 149832719 -103423864 + HAL1 LINE L1 1459 1597 -910 306 279 59 45 chr2 149833456 149833678 -103422905 + L1MEd LINE L1 2138 2362 -3767 2438 104 38 76 chr2 149833704 149834176 -103422407 + SVA Other Other 415 868 -518 6276 71 8 51 chr2 149834227 149835247 -103421336 + SVA Other Other 430 1407 0 332 355 8 33 chr2 149835837 149835958 -103420625 + L2 LINE L2 3154 3271 -1 1370 202 123 60 chr2 149836005 149836470 -103420113 + MLT1D LTR MaLR 12 505 0 250 211 28 42 chr2 149836889 149836960 -103419623 + L2 LINE L2 3244 3313 0 2545 202 24 10 chr2 149837004 149837594 -103418989 + L1MB7 LINE L1 5586 6183 -1 764 270 57 16 chr2 149838102 149838350 -103418233 - MIR SINE MIR 0 262 5 673 276 91 6 chr2 149838436 149838744 -103417839 + L2 LINE L2 2214 2630 -684 898 237 107 35 chr2 149838817 149839134 -103417449 - MLT1J1 LTR MaLR -106 340 1 219 278 19 56 chr2 149841688 149841796 -103414787 - L2 LINE L2 0 3272 3169 255 152 0 0 chr2 149842261 149842307 -103414276 + (TCCA)n Simple_repeat Simple_repeat 4 49 0 4957 187 70 6 chr2 149844611 149845927 -103410656 + Charlie1a DNA MER1_type 1 1452 -3 180 0 0 0 chr2 149847423 149847443 -103409140 + (CAT)n Simple_repeat Simple_repeat 1 20 0 203 250 0 19 chr2 149851607 149851659 -103404924 + GA-rich Low_complexity Low_complexity 2 52 0 222 37 0 0 chr2 149852736 149852763 -103403820 + (A)n Simple_repeat Simple_repeat 1 27 0 461 313 101 17 chr2 149853342 149853639 -103402944 + L3b LINE CR1 1108 1429 -154 353 250 80 0 chr2 149855761 149855861 -103400722 + MER103 DNA DNA 2 109 -57 232 214 0 0 chr2 149855875 149855917 -103400666 - L2 LINE L2 0 3313 3272 388 335 102 10 chr2 149858467 149858664 -103397919 + MIR SINE MIR 35 249 -13 190 196 65 0 chr2 149858784 149858830 -103397753 - L2 LINE L2 -4 3309 3261 2414 82 0 0 chr2 149859686 149859977 -103396606 - AluSc SINE Alu -18 291 1 28 29 0 0 chr2 149859987 149860022 -103396561 + AT_rich Low_complexity Low_complexity 1 35 0 286 247 67 45 chr2 149860071 149860160 -103396423 + MIR SINE MIR 97 187 -75 359 279 240 6 chr2 149860221 149860404 -103396179 + MIR SINE MIR 37 262 0 22 0 0 0 chr2 149860694 149860716 -103395867 + AT_rich Low_complexity Low_complexity 1 22 0 236 111 89 0 chr2 149861395 149861440 -103395143 - L2 LINE L2 0 3313 3265 282 299 36 86 chr2 149861490 149861794 -103394789 - L2 LINE L2 -167 3105 2817 920 303 129 50 chr2 149861931 149862110 -103394473 + HAL1 LINE L1 61 224 -2283 447 19 0 0 chr2 149862110 149862162 -103394421 + (TG)n Simple_repeat Simple_repeat 2 53 0 920 303 129 50 chr2 149862162 149862780 -103393803 + HAL1 LINE L1 224 921 -1586 1224 121 104 12 chr2 149862823 149863063 -103393520 + LTR1 LTR ERV1 1 262 -523 2239 115 19 3 chr2 149863097 149863419 -103393164 + LTR1 LTR ERV1 459 785 0 2102 241 182 42 chr2 149863419 149864803 -103391780 + HAL1 LINE L1 918 2495 -12 307 269 60 36 chr2 149864801 149864968 -103391615 - L1MEd LINE L1 -4896 1223 1053 * 824 220 0 0 chr2 149864984 149865125 -103391458 - FRAM SINE Alu -32 144 4 2209 101 0 0 chr2 149865235 149865521 -103391062 - AluSc SINE Alu -8 301 16 344 257 106 35 chr2 149865535 149865761 -103390822 - L1MEd LINE L1 -5113 1006 765 201 74 0 0 chr2 149865978 149866005 -103390578 + (GAAAA)n Simple_repeat Simple_repeat 2 28 0 207 288 17 0 chr2 149866978 149867037 -103389546 + L2 LINE L2 3254 3313 0 2235 108 13 3 chr2 149868825 149869131 -103387452 + AluSx SINE Alu 1 309 -3 723 253 18 45 chr2 149869263 149869484 -103387099 + MIR SINE MIR 34 248 -14 185 344 22 11 chr2 149870888 149870978 -103385605 + MIR SINE MIR 165 255 -7 319 373 80 7 chr2 149871663 149871813 -103384770 + MIR SINE MIR 31 191 -71 24 32 0 0 chr2 149872001 149872032 -103384551 + AT_rich Low_complexity Low_complexity 1 31 0 238 333 0 0 chr2 149872608 149872677 -103383906 + Charlie4 DNA MER1_type 1871 1939 -22 185 319 43 0 chr2 149872697 149872766 -103383817 - L2 LINE L2 0 3313 3242 180 303 45 30 chr2 149873012 149873078 -103383505 + L2 LINE L2 2987 3053 -219 185 254 34 34 chr2 149873126 149873185 -103383398 + L2 LINE L2 3169 3227 -86 444 270 43 92 chr2 149873735 149873920 -103382663 - MER5B DNA MER1_type -1 177 2 1882 106 6 88 chr2 149874430 149874759 -103381824 - AluSg SINE Alu -8 302 1 723 267 15 69 chr2 149874814 149875076 -103381507 + MIR SINE MIR 12 259 -3 2460 223 79 83 chr2 149875791 149876598 -103379985 - MER21B LTR ERV1 -57 806 3 205 295 147 0 chr2 149876743 149876838 -103379745 + L3 LINE CR1 1293 1401 -176 205 176 0 0 chr2 149877460 149877494 -103379089 + T-rich Low_complexity Low_complexity 2 35 0 2006 163 123 5 chr2 149877670 149878051 -103378532 + MSTA LTR MaLR 1 426 -2 1958 186 32 61 chr2 149879522 149879984 -103376599 + L1MB5 LINE L1 5718 6166 -8 446 247 205 0 chr2 149880607 149880803 -103375780 + MIR SINE MIR 19 252 -10 285 58 58 0 chr2 149880975 149881027 -103375556 + (CATATA)n Simple_repeat Simple_repeat 6 60 0 22 35 0 0 chr2 149881454 149881483 -103375100 + AT_rich Low_complexity Low_complexity 1 29 0 258 310 35 0 chr2 149881660 149881747 -103374836 - MIR3 SINE MIR -9 199 110 418 242 16 24 chr2 149881824 149881948 -103374635 + MER103 DNA DNA 11 133 -33 282 56 0 0 chr2 149883689 149883725 -103372858 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 207 216 27 54 chr2 149885053 149885127 -103371456 + A-rich Low_complexity Low_complexity 2 73 0 2217 84 3 32 chr2 149885149 149885458 -103371125 + AluY SINE Alu 1 300 -11 258 116 0 0 chr2 149885887 149885930 -103370653 + (TG)n Simple_repeat Simple_repeat 2 44 0 2131 120 3 0 chr2 149886029 149886321 -103370262 + AluSg SINE Alu 1 293 -17 394 328 25 25 chr2 149888030 149888152 -103368431 - MIR SINE MIR -121 141 20 722 215 87 7 chr2 149889064 149889213 -103367370 - FRAM SINE Alu -16 160 1 2132 141 0 0 chr2 149889666 149889970 -103366613 + AluSx SINE Alu 3 306 -6 202 255 0 0 chr2 149891046 149891093 -103365490 - L2 LINE L2 0 3313 3267 261 83 0 0 chr2 149891482 149891518 -103365065 + (CA)n Simple_repeat Simple_repeat 1 36 0 579 342 73 8 chr2 149892903 149893163 -103363420 + L3 LINE CR1 1228 1504 -73 198 0 0 0 chr2 149893457 149893479 -103363104 + (CA)n Simple_repeat Simple_repeat 1 22 0 879 153 64 0 chr2 149893484 149893641 -103362942 + MER2 DNA MER2_type 178 344 -1 260 347 91 30 chr2 149893641 149893840 -103362743 - L1MC/D LINE L1 -2151 5657 5447 1173 212 86 37 chr2 149893924 149894193 -103362390 + AluJo SINE Alu 1 282 -30 477 209 62 102 chr2 149894600 149894825 -103361758 + L2 LINE L2 3098 3313 0 602 277 114 0 chr2 149895095 149895279 -103361304 - MIR SINE MIR 0 262 58 2278 106 10 0 chr2 149895322 149895624 -103360959 - AluSp SINE Alu -8 305 1 799 189 150 34 chr2 149895750 149895983 -103360600 - MER112 DNA MER1_type 0 260 1 187 302 16 0 chr2 149896326 149896389 -103360194 - MIR3 SINE MIR -133 75 12 2428 64 0 13 chr2 149896581 149896894 -103359689 + AluY SINE Alu 1 309 -2 420 240 74 8 chr2 149897052 149897173 -103359410 - MIR3 SINE MIR -15 193 65 456 35 0 0 chr2 149897986 149898044 -103358539 + (CA)n Simple_repeat Simple_repeat 2 59 0 605 275 145 10 chr2 149898560 149898767 -103357816 + MIR SINE MIR 4 238 -24 413 244 93 114 chr2 149898819 149899065 -103357518 - Charlie8 DNA MER1_type -2170 247 7 500 264 77 34 chr2 149899106 149899314 -103357269 + L2 LINE L2 3093 3309 -4 205 152 0 0 chr2 149899958 149899991 -103356592 + (TCCA)n Simple_repeat Simple_repeat 4 36 0 189 295 16 33 chr2 149900068 149900129 -103356454 - L2 LINE L2 -60 3212 3153 1187 227 20 27 chr2 149900174 149900469 -103356114 + MER99 DNA DNA 535 827 -1 647 187 22 30 chr2 149900519 149900653 -103355930 - FLAM_A SINE Alu 0 133 1 333 0 0 0 chr2 149900809 149900846 -103355737 + (CA)n Simple_repeat Simple_repeat 2 38 0 248 312 65 0 chr2 149900976 149901053 -103355530 - MER102a DNA MER1_type -1 329 248 22 0 0 0 chr2 149901053 149901075 -103355508 + AT_rich Low_complexity Low_complexity 1 22 0 256 367 76 27 chr2 149901684 149902004 -103354579 + L2 LINE L2 2720 3052 -220 218 328 0 0 chr2 149902103 149902164 -103354419 + L2 LINE L2 3251 3311 -2 477 269 131 28 chr2 149902242 149902705 -103353878 + L2 LINE L2 2595 3208 -105 2332 96 3 0 chr2 149902934 149903236 -103353347 - AluSq SINE Alu -10 303 1 188 200 271 35 chr2 149904231 149904316 -103352267 - MIR SINE MIR -7 255 151 2496 174 131 48 chr2 149904316 149905026 -103351557 + LTR1B LTR ERV1 21 785 0 477 211 158 0 chr2 149905029 149905143 -103351440 - MIR SINE MIR -119 143 12 206 300 17 0 chr2 149905150 149905210 -103351373 + MIR SINE MIR 185 245 -17 458 232 221 49 chr2 149905645 149905908 -103350675 + MLT1K LTR MaLR 167 474 -114 244 175 0 0 chr2 149906007 149906047 -103350536 + MLT1K LTR MaLR 527 566 -22 810 204 6 6 chr2 149907981 149908138 -103348445 + LTR33 LTR ERVL 5 161 -360 839 265 44 5 chr2 149908214 149908418 -103348165 + LTR33 LTR ERVL 303 514 -7 346 209 0 0 chr2 149908444 149908511 -103348072 + MER103 DNA DNA 55 121 -45 226 177 16 16 chr2 149908787 149908849 -103347734 + CT-rich Low_complexity Low_complexity 2 63 0 2036 106 0 0 chr2 149909208 149909472 -103347111 + AluSx SINE Alu 1 264 -48 937 199 144 8 chr2 149909512 149909748 -103346835 + L2 LINE L2 2316 2583 -731 482 286 82 11 chr2 149909748 149909930 -103346653 - MIR SINE MIR -48 214 20 226 219 0 0 chr2 149910797 149910838 -103345745 + (CA)n Simple_repeat Simple_repeat 2 42 0 332 192 80 132 chr2 149915102 149915251 -103341332 - MIR3 SINE MIR -7 201 44 211 83 21 21 chr2 149915905 149915953 -103340630 + (TA)n Simple_repeat Simple_repeat 2 49 0 412 255 29 47 chr2 149916520 149916709 -103339874 - MIR SINE MIR -58 150 19 445 301 25 37 chr2 149917254 149917417 -103339166 - MIR3 SINE MIR 0 208 48 2427 76 0 3 chr2 149918642 149918944 -103337639 + AluSc SINE Alu 2 302 -7 742 172 0 8 chr2 149919511 149919645 -103336938 + FLAM_C SINE Alu 1 133 0 21 0 0 0 chr2 149919649 149919670 -103336913 + AT_rich Low_complexity Low_complexity 1 21 0 204 300 14 0 chr2 149920298 149920368 -103336215 + (TATG)n Simple_repeat Simple_repeat 2 72 0 25 31 0 0 chr2 149922084 149922116 -103334467 + AT_rich Low_complexity Low_complexity 1 32 0 262 308 26 0 chr2 149924280 149924358 -103332225 + GA-rich Low_complexity Low_complexity 2 81 0 1631 155 7 41 chr2 149924570 149924860 -103331723 - AluJb SINE Alu -21 291 12 616 223 55 28 chr2 149925310 149925471 -103331112 - MIR3 SINE MIR -37 171 6 234 91 0 0 chr2 149925558 149925591 -103330992 + (CA)n Simple_repeat Simple_repeat 2 34 0 1098 238 174 6 chr2 149925880 149926220 -103330363 + MLT1H1 LTR MaLR 148 544 -11 278 263 199 50 chr2 149926575 149926876 -103329707 - Charlie8 DNA MER1_type -1945 472 127 2061 125 7 0 chr2 149927333 149927622 -103328961 - AluSg SINE Alu -19 291 1 447 52 0 0 chr2 149927622 149927680 -103328903 - AluSc SINE Alu -175 134 77 1305 147 5 9 chr2 149927681 149927892 -103328691 - AluSg SINE Alu -100 210 1 225 0 0 0 chr2 149928540 149928565 -103328018 + (T)n Simple_repeat Simple_repeat 1 25 0 297 272 25 0 chr2 149930043 149930124 -103326459 + MIR SINE MIR 64 146 -116 413 206 0 0 chr2 149930302 149930375 -103326208 - MER5A DNA MER1_type -116 73 1 1807 160 0 3 chr2 149930488 149930770 -103325813 + AluJo SINE Alu 1 281 -31 327 208 129 10 chr2 149931118 149931219 -103325364 - L2 LINE L2 -1904 1410 1298 540 297 227 17 chr2 149931450 149931931 -103324652 + L2 LINE L2 318 899 -2415 1968 206 93 16 chr2 149932033 149932612 -103323971 + LTR48B LTR ERV1 21 644 0 351 245 151 19 chr2 149932756 149932862 -103323721 - L2 LINE L2 0 3313 3194 2221 83 0 0 chr2 149932964 149933241 -103323342 - AluY SINE Alu -17 294 18 291 71 0 0 chr2 149933531 149933573 -103323010 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 1262 305 100 58 chr2 149933739 149934972 -103321611 + L2 LINE L2 2004 3296 -17 225 0 0 0 chr2 149934976 149935001 -103321582 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 25 0 0 0 chr2 149935562 149935587 -103320996 + AT_rich Low_complexity Low_complexity 1 25 0 566 282 85 16 chr2 149935954 149936142 -103320441 - MIR SINE MIR -55 207 7 2232 122 0 0 chr2 149936606 149936909 -103319674 - AluSx SINE Alu -9 303 1 2142 139 103 23 chr2 149937258 149937654 -103318929 - MSTC LTR MaLR 0 428 1 1915 131 136 16 chr2 149938729 149939111 -103317472 + MSTA LTR MaLR 1 428 0 342 335 34 11 chr2 149939229 149939405 -103317178 + L1MC5 LINE L1 7735 7914 -47 * 420 191 48 24 chr2 149939396 149939522 -103317061 - L1MC5 LINE L1 -807 7154 7026 480 288 20 17 chr2 149939595 149939887 -103316696 - AluSp SINE Alu -20 293 1 447 277 87 69 chr2 149940074 149940305 -103316278 - MIR SINE MIR -19 243 9 335 336 80 0 chr2 149940538 149940675 -103315908 - MIR3 SINE MIR -48 160 13 1864 154 3 22 chr2 149940826 149941138 -103315445 - AluSq SINE Alu -7 306 1 2431 100 0 0 chr2 149941281 149941591 -103314992 - AluSg SINE Alu 0 310 1 708 305 212 16 chr2 149943554 149944111 -103312472 + L3 LINE CR1 902 1567 -10 2403 92 7 0 chr2 149947575 149947880 -103308703 + AluSg SINE Alu 1 307 -3 236 217 22 0 chr2 149948348 149948394 -103308189 + MIR3 SINE MIR 141 187 -21 262 295 109 39 chr2 149949274 149949430 -103307153 + L3b LINE CR1 1292 1458 -125 1701 141 141 23 chr2 149951260 149951607 -103304976 + MLT1B LTR MaLR 3 390 0 21 36 0 0 chr2 149952096 149952124 -103304459 + AT_rich Low_complexity Low_complexity 1 28 0 289 322 96 23 chr2 149955162 149955507 -103301076 + HAL1b LINE L1 310 679 -669 24 0 0 0 chr2 149956080 149956104 -103300479 + AT_rich Low_complexity Low_complexity 1 24 0 281 203 128 45 chr2 149956179 149956312 -103300271 + L1ME4a LINE L1 5967 6110 -11 2121 77 80 0 chr2 149957660 149957947 -103298636 - AluSg SINE Alu 0 310 1 231 276 0 0 chr2 149961521 149961597 -103294986 + (TA)n Simple_repeat Simple_repeat 1 76 0 309 51 0 0 chr2 149964013 149964052 -103292531 + (T)n Simple_repeat Simple_repeat 1 39 0 432 55 0 0 chr2 149964376 149964431 -103292152 + (CA)n Simple_repeat Simple_repeat 1 55 0 497 319 12 6 chr2 149965379 149965548 -103291035 - MIR3 SINE MIR 0 208 39 1813 177 3 16 chr2 149965832 149966148 -103290435 - AluJb SINE Alu 0 312 1 184 263 0 0 chr2 149966308 149966346 -103290237 + MIR SINE MIR 210 247 -15 248 155 52 17 chr2 149967051 149967109 -103289474 - L1ME2 LINE L1 -5 6159 6100 4327 132 14 46 chr2 149967112 149967916 -103288667 + Tigger1 DNA MER2_type 2 779 -1639 7997 124 45 5 chr2 149968016 149969338 -103287245 + Tigger1 DNA MER2_type 1043 2418 0 2336 245 64 11 chr2 149969338 149970130 -103286453 - L1ME2 LINE L1 -64 6100 5352 234 0 0 0 chr2 149970130 149970156 -103286427 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 333 0 0 0 chr2 149970155 149970192 -103286391 + (CA)n Simple_repeat Simple_repeat 2 38 0 2336 245 64 11 chr2 149970156 149970278 -103286305 - L1ME2 LINE L1 -812 5352 5176 2198 114 0 0 chr2 149970317 149970606 -103285977 + AluSx SINE Alu 1 289 -23 621 141 24 10 chr2 149974179 149974338 -103282245 + MLT1A1 LTR MaLR 3 225 -140 183 305 85 0 chr2 149974447 149974506 -103282077 - L2 LINE L2 -1 3312 3249 663 332 70 4 chr2 149974600 149974844 -103281739 + MIR SINE MIR 3 262 0 183 80 0 0 chr2 149975614 149975639 -103280944 + (A)n Simple_repeat Simple_repeat 1 25 0 35 24 0 0 chr2 149975911 149975953 -103280630 + AT_rich Low_complexity Low_complexity 1 42 0 1817 163 21 0 chr2 149975956 149976238 -103280345 - AluJb SINE Alu -24 288 1 13643 25 0 0 chr2 149976362 149978743 -103277840 - L1PA2 LINE L1 0 6155 3779 894 234 69 127 chr2 149979332 149979481 -103277102 - LTR33A LTR ERVL -4 519 363 1398 148 67 14 chr2 149979481 149979765 -103276818 + AluSp SINE Alu 1 299 -4 894 234 69 127 chr2 149979765 149979803 -103276780 - LTR33A LTR ERVL -160 363 324 2358 77 3 10 chr2 149979803 149980100 -103276483 + AluSp SINE Alu 19 313 0 894 234 69 127 chr2 149980100 149980462 -103276121 - LTR33A LTR ERVL -199 324 1 2414 60 0 0 chr2 149981697 149981995 -103274588 - AluY SINE Alu -10 301 4 279 0 0 0 chr2 149983164 149983195 -103273388 + (T)n Simple_repeat Simple_repeat 1 31 0 392 313 115 16 chr2 149984278 149984505 -103272078 + MIR SINE MIR 2 246 -16 1417 176 34 90 chr2 149984558 149984945 -103271638 - MLT1A1 LTR MaLR 0 365 1 1042 136 23 6 chr2 149985868 149986044 -103270539 - AluSc SINE Alu -6 303 125 180 0 0 0 chr2 149986690 149986710 -103269873 + (T)n Simple_repeat Simple_repeat 1 20 0 2284 92 3 0 chr2 149986779 149987072 -103269511 - AluSp SINE Alu -19 294 1 449 296 28 9 chr2 149987188 149987402 -103269181 - L1MC4 LINE L1 -876 6974 6718 422 301 96 0 chr2 149987913 149988059 -103268524 - MIR SINE MIR -65 197 38 183 349 93 23 chr2 149988242 149988414 -103268169 + L2 LINE L2 2659 2842 -472 2368 103 3 0 chr2 149988529 149988841 -103267742 - AluSq SINE Alu 0 313 1 245 222 87 32 chr2 149989174 149989300 -103267283 - L1ME4a LINE L1 -3 6118 5986 243 244 151 25 chr2 149989335 149989454 -103267129 - L1ME4a LINE L1 -208 5913 5780 23 54 0 0 chr2 149989460 149989497 -103267086 + AT_rich Low_complexity Low_complexity 1 37 0 1435 223 3 20 chr2 149990013 149990309 -103266274 + AluJo SINE Alu 1 291 -21 309 100 0 0 chr2 149990681 149990731 -103265852 + (CA)n Simple_repeat Simple_repeat 2 51 0 971 319 65 20 chr2 149991242 149991747 -103264836 + HERV16 LTR ERVL 2029 2556 -2440 2090 91 0 0 chr2 149991948 149992246 -103264337 + L1PB2 LINE L1 5589 5886 -265 2155 138 33 30 chr2 149992796 149993159 -103263424 - THE1B LTR MaLR 0 364 1 638 322 38 8 chr2 149993690 149993954 -103262629 - L2 LINE L2 -970 2344 2073 399 290 28 0 chr2 149993981 149994088 -103262495 + L2 LINE L2 3199 3308 -5 341 308 70 14 chr2 149994400 149994543 -103262040 - L1ME3 LINE L1 -14 6148 5998 1274 106 29 33 chr2 149994721 149994966 -103261617 - L1P4 LINE L1 -642 5526 5283 575 287 90 22 chr2 149995317 149995585 -103260998 + HERV16 LTR ERVL 1688 1973 -3023 1465 138 84 3 chr2 149996146 149996442 -103260141 + L1MA4A LINE L1 5828 6147 -156 1499 142 11 0 chr2 149996442 149996716 -103259867 + L1MA4A LINE L1 6018 6302 -1 204 369 19 4 chr2 149997300 149997418 -103259165 + MIR SINE MIR 88 208 0 24 0 0 0 chr2 149997468 149997492 -103259091 + AT_rich Low_complexity Low_complexity 1 24 0 498 310 6 29 chr2 149997876 149998050 -103258533 - MER5A DNA MER1_type -11 178 9 939 195 98 5 chr2 149998080 149998285 -103258298 - MER58A DNA MER1_type 0 224 1 1743 204 70 0 chr2 149998636 149999062 -103257521 - L1MC4 LINE L1 -1114 6928 6473 577 197 8 8 chr2 149999064 149999181 -103257402 + Tigger1 DNA MER2_type 1 117 -2301 273 171 66 40 chr2 149999606 149999682 -103256901 + MER116 DNA Mariner 3 80 0 195 250 0 0 chr2 150000363 150000403 -103256180 + MER5B DNA MER1_type 10 49 -129 194 328 147 0 chr2 150001309 150001425 -103255158 - MIR SINE MIR -11 251 119 268 238 50 0 chr2 150001642 150001722 -103254861 + MLT1J LTR MaLR 428 511 0 1499 116 21 131 chr2 150002674 150003003 -103253580 + AluJb SINE Alu 2 294 -8 635 159 32 16 chr2 150003305 150003431 -103253152 + AluSg/x SINE Alu 167 294 -16 3515 115 10 10 chr2 150003431 150004007 -103252576 + Tigger1 DNA MER2_type 1499 2074 -344 348 261 0 22 chr2 150004017 150004109 -103252474 - L1MC4 LINE L1 -1339 6703 6614 2194 90 14 0 chr2 150004124 150004413 -103252170 - AluSq SINE Alu -20 293 1 2387 81 0 7 chr2 150004755 150005050 -103251533 - AluY SINE Alu -18 293 1 306 295 93 14 chr2 150005225 150005364 -103251219 - MER5A DNA MER1_type -33 156 7 481 215 31 31 chr2 150005506 150005636 -103250947 - L1ME LINE L1 -454 5712 5583 248 211 28 42 chr2 150005680 150005751 -103250832 - L2 LINE L2 0 3313 3244 1222 204 123 60 chr2 150006170 150006635 -103249948 - MLT1D LTR MaLR 0 505 12 336 355 8 32 chr2 150006682 150006806 -103249777 - L2 LINE L2 -1 3271 3151 259 23 45 23 chr2 150007393 150007437 -103249146 + (TTTA)n Simple_repeat Simple_repeat 3 47 0 6231 79 18 34 chr2 150007437 150008383 -103248200 - SVA Other Other -23 1363 433 1081 30 6 12 chr2 150008400 150008569 -103248014 - SVA Other Other -520 866 699 746 264 88 48 chr2 150008593 150009340 -103247243 - L1MEd LINE L1 -4863 1256 574 379 278 77 24 chr2 150009619 150009788 -103246795 + MER5B DNA MER1_type 1 178 0 382 252 192 53 chr2 150009853 150010004 -103246579 - MER5B DNA MER1_type 0 178 7 342 239 68 0 chr2 150010019 150010107 -103246476 - MER102b DNA MER1_type 0 341 248 246 233 0 0 chr2 150010246 150010306 -103246277 + (TATG)n Simple_repeat Simple_repeat 4 63 0 202 179 36 0 chr2 150010678 150010734 -103245849 + (TTATA)n Simple_repeat Simple_repeat 5 62 0 693 266 25 55 chr2 150011201 150011438 -103245145 + MIR SINE MIR 12 241 -21 240 254 0 30 chr2 150012428 150012495 -103244088 - L2 LINE L2 -181 3091 3027 234 275 55 73 chr2 150013506 150013615 -103242968 + L2 LINE L2 3182 3288 -25 21 36 0 0 chr2 150014078 150014106 -103242477 + AT_rich Low_complexity Low_complexity 1 28 0 2044 190 115 117 chr2 150014617 150015445 -103241138 - LTR1B LTR ERV1 0 826 1 2568 46 0 3 chr2 150016180 150016484 -103240099 + AluY SINE Alu 1 303 -8 556 314 65 15 chr2 150016642 150016855 -103239728 - MIR SINE MIR 0 262 38 883 215 42 5 chr2 150017075 150017266 -103239317 - AluSg/x SINE Alu -6 304 107 648 172 82 0 chr2 150018202 150018324 -103238259 - AluJo SINE Alu -176 136 5 271 255 163 10 chr2 150018336 150018434 -103238149 - MIR SINE MIR -56 206 94 7847 184 43 20 chr2 150018923 150021892 -103234691 + L1MA4A LINE L1 3192 6160 -1 3391 228 43 73 chr2 150021895 150023395 -103233188 + L1ME1 LINE L1 3791 5246 -900 2358 208 33 60 chr2 150023382 150024063 -103232520 + L1ME1 LINE L1 5448 6109 -57 * 2465 81 0 0 chr2 150024063 150024360 -103232223 - AluY SINE Alu -14 297 1 2358 208 33 60 chr2 150024360 150024412 -103232171 + L1ME1 LINE L1 6109 6161 -5 360 0 0 0 chr2 150024756 150024796 -103231787 + (TG)n Simple_repeat Simple_repeat 2 41 0 210 322 44 11 chr2 150025678 150025768 -103230815 + L2 LINE L2 3180 3272 0 1802 146 61 30 chr2 150026278 150026641 -103229942 - THE1C LTR MaLR -1 374 1 192 342 13 38 chr2 150027157 150027236 -103229347 + L2 LINE L2 3229 3305 -8 304 307 153 35 chr2 150027351 150027553 -103229030 - MIR SINE MIR 0 262 37 2249 101 3 3 chr2 150030318 150030614 -103225969 + AluSx SINE Alu 1 296 -16 199 314 71 0 chr2 150032610 150032680 -103223903 - L3 LINE CR1 -6 1571 1497 2490 65 3 0 chr2 150032745 150033053 -103223530 - AluY SINE Alu -2 309 1 189 0 0 0 chr2 150033280 150033301 -103223282 + (CA)n Simple_repeat Simple_repeat 1 21 0 209 293 45 113 chr2 150033320 150033542 -103223041 - L3 LINE CR1 -183 1394 1188 31 44 0 0 chr2 150033568 150033613 -103222970 + AT_rich Low_complexity Low_complexity 1 45 0 204 308 44 33 chr2 150033620 150033711 -103222872 - L3 LINE CR1 -741 836 745 325 294 109 88 chr2 150033831 150034069 -103222514 - MIR SINE MIR -14 248 6 188 264 14 56 chr2 150034151 150034223 -103222360 - L3 LINE CR1 -1088 489 421 320 293 47 0 chr2 150034308 150034414 -103222169 - MIR SINE MIR -89 173 63 200 200 0 0 chr2 150034964 150034999 -103221584 + (ATG)n Simple_repeat Simple_repeat 3 37 0 216 204 0 0 chr2 150035258 150035307 -103221276 - L2 LINE L2 0 3313 3265 297 51 0 0 chr2 150035517 150035556 -103221027 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 2034 143 0 0 chr2 150035693 150035993 -103220590 + AluSx SINE Alu 1 300 -12 39377 64 5 1 chr2 150036007 150040242 -103216341 + L1P LINE L1 1 4260 -1886 2230 99 3 7 chr2 150040242 150040545 -103216038 + AluY SINE Alu 1 302 -9 39377 64 5 1 chr2 150040545 150041400 -103215183 + L1P LINE L1 4260 5110 -1036 6126 39 5 4 chr2 150041500 150042285 -103214298 + L1PA5 LINE L1 5390 6175 0 3086 236 58 41 chr2 150043967 150045479 -103211104 + L1MDa LINE L1 44 1812 -4728 351 0 0 0 chr2 150046396 150046435 -103210148 + (CAAAA)n Simple_repeat Simple_repeat 5 43 0 1949 138 0 7 chr2 150046657 150046940 -103209643 + AluSx SINE Alu 1 281 -31 291 28 0 0 chr2 150046943 150046979 -103209604 + (CAA)n Simple_repeat Simple_repeat 2 37 0 237 65 0 0 chr2 150048044 150048075 -103208508 + (TG)n Simple_repeat Simple_repeat 1 31 0 210 206 0 95 chr2 150048470 150048533 -103208050 - MIR SINE MIR -87 175 119 2219 83 0 4 chr2 150049540 150049850 -103206733 - AluY SINE Alu 0 315 7 2281 68 11 0 chr2 150050312 150050614 -103205969 + AluY SINE Alu 1 305 0 337 365 40 7 chr2 150051315 150051463 -103205120 + MIR SINE MIR 61 213 -49 216 0 0 0 chr2 150051566 150051590 -103204993 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 193 0 94 0 chr2 150052511 150052543 -103204040 + A-rich Low_complexity Low_complexity 2 36 0 2477 138 31 69 chr2 150052771 150053248 -103203335 - LTR32 LTR ERVL 0 471 13 534 312 14 0 chr2 150054464 150054602 -103201981 - MER5B DNA MER1_type -34 144 5 231 209 0 0 chr2 150054650 150054693 -103201890 + (CA)n Simple_repeat Simple_repeat 1 43 0 362 374 112 5 chr2 150055948 150056154 -103200429 + MIR SINE MIR 5 232 -30 267 202 175 61 chr2 150056752 150056866 -103199717 - MER117 DNA MER1_type -14 183 57 378 209 73 141 chr2 150057949 150058140 -103198443 - MER5B DNA MER1_type 0 178 1 1095 202 14 5 chr2 150058248 150058456 -103198127 - MER6B DNA MER2_type 0 210 1 320 292 80 18 chr2 150059470 150059583 -103197000 - MIR3 SINE MIR -80 128 9 26 50 0 0 chr2 150059809 150059849 -103196734 + AT_rich Low_complexity Low_complexity 1 40 0 247 283 60 121 chr2 150060319 150060485 -103196098 + MIR3 SINE MIR 48 203 -5 345 319 30 34 chr2 150062301 150062564 -103194019 - MIR SINE MIR 0 262 1 21 36 0 0 chr2 150062764 150062792 -103193791 + AT_rich Low_complexity Low_complexity 1 28 0 406 261 155 12 chr2 150063500 150063661 -103192922 + MIR SINE MIR 78 261 -1 380 283 0 19 chr2 150064666 150064772 -103191811 - MIR SINE MIR -64 144 41 1013 68 51 9 chr2 150064826 150065266 -103191317 + (TA)n Simple_repeat Simple_repeat 1 458 0 293 293 72 44 chr2 150065268 150065449 -103191134 + L3b LINE CR1 1240 1425 -158 359 260 134 89 chr2 150067452 150067698 -103188885 + MIR SINE MIR 5 261 -1 1559 195 13 7 chr2 150067746 150068030 -103188553 + AluJb SINE Alu 1 289 -23 237 33 0 0 chr2 150068030 150068060 -103188523 + (GGGGA)n Simple_repeat Simple_repeat 4 33 0 1559 195 13 7 chr2 150068060 150068083 -103188500 + AluJb SINE Alu 289 310 -2 593 117 0 47 chr2 150068086 150068214 -103188369 + (GGAAA)n Simple_repeat Simple_repeat 3 124 0 377 363 8 0 chr2 150069289 150069413 -103187170 + MIR SINE MIR 24 148 -60 204 40 0 0 chr2 150069415 150069440 -103187143 + (GA)n Simple_repeat Simple_repeat 1 25 0 225 292 115 49 chr2 150069558 150069784 -103186799 + L2 LINE L2 1897 2137 -1177 * 2741 266 147 37 chr2 150069781 150070889 -103185694 - L2 LINE L2 -1190 2124 895 394 338 105 5 chr2 150071062 150071272 -103185311 - MIR SINE MIR -3 259 29 273 336 103 14 chr2 150072409 150072555 -103184028 + MIR3 SINE MIR 7 165 -43 31 44 0 0 chr2 150073103 150073148 -103183435 + AT_rich Low_complexity Low_complexity 1 45 0 210 118 0 0 chr2 150073291 150073325 -103183258 + (GAAA)n Simple_repeat Simple_repeat 3 36 0 201 39 0 0 chr2 150073351 150073377 -103183206 + (GAAAA)n Simple_repeat Simple_repeat 3 28 0 2393 171 7 12 chr2 150074543 150074959 -103181624 + MER47B DNA MER2_type 5 418 0 24 53 0 0 chr2 150076250 150076288 -103180295 + AT_rich Low_complexity Low_complexity 1 38 0 180 0 0 0 chr2 150076811 150076831 -103179752 + (A)n Simple_repeat Simple_repeat 1 20 0 315 0 0 0 chr2 150077686 150077721 -103178862 + (A)n Simple_repeat Simple_repeat 1 35 0 282 244 64 13 chr2 150078193 150078271 -103178312 - L2 LINE L2 -6 3266 3185 205 322 22 0 chr2 150078528 150078612 -103177971 - MIR SINE MIR -81 127 40 1554 233 87 55 chr2 150079414 150080084 -103176499 + L1MC4 LINE L1 7298 7988 -54 1030 137 58 32 chr2 150082075 150082265 -103174318 + MER3 DNA MER1_type 15 209 0 321 284 63 0 chr2 150082445 150082572 -103174011 - L1ME4a LINE L1 0 6121 5987 259 343 0 0 chr2 150082576 150082649 -103173934 - L2 LINE L2 -15 3257 3185 353 316 186 16 chr2 150083132 150083325 -103173258 - L2 LINE L2 -620 2694 2469 183 306 0 41 chr2 150084154 150084203 -103172380 + L2 LINE L2 3211 3257 -15 2107 78 65 3 chr2 150085130 150085423 -103171160 + AluY SINE Alu 1 311 0 450 302 41 17 chr2 150085569 150085741 -103170842 - MIR SINE MIR -85 177 2 240 327 97 9 chr2 150086528 150086641 -103169942 + L2 LINE L2 3150 3272 0 212 179 0 0 chr2 150087529 150087568 -103169015 + (TAA)n Simple_repeat Simple_repeat 3 41 0 205 280 140 9 chr2 150088586 150088693 -103167890 - MIR3 SINE MIR -32 176 56 209 161 12 37 chr2 150089458 150089539 -103167044 + (TA)n Simple_repeat Simple_repeat 1 79 0 283 264 71 11 chr2 150092119 150092211 -103164372 - MIR SINE MIR -67 141 54 38 51 0 0 chr2 150094963 150095022 -103161561 + AT_rich Low_complexity Low_complexity 1 59 0 180 239 56 56 chr2 150095363 150095434 -103161149 + L2 LINE L2 2679 2749 -565 321 204 75 183 chr2 150095528 150095621 -103160962 + MIR SINE MIR 25 126 -136 1963 114 7 4 chr2 150095621 150095926 -103160657 - AluSx SINE Alu 0 306 1 321 204 75 183 chr2 150095926 150096071 -103160512 + MIR SINE MIR 126 238 -24 2004 114 0 7 chr2 150096792 150097116 -103159467 + AluSc SINE Alu 1 322 0 701 348 94 21 chr2 150097230 150097742 -103158841 + L2 LINE L2 2193 2741 -573 189 171 0 0 chr2 150098236 150098271 -103158312 + (CATATA)n Simple_repeat Simple_repeat 4 38 0 2026 135 19 29 chr2 150099127 150099506 -103157077 + THE1C LTR MaLR 1 375 0 531 230 113 29 chr2 150100141 150100345 -103156238 + L1MC5 LINE L1 7719 7939 -22 21 36 0 0 chr2 150100470 150100498 -103156085 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 150100650 150100672 -103155911 + AT_rich Low_complexity Low_complexity 1 22 0 622 212 139 0 chr2 150100817 150100968 -103155615 + MER5B DNA MER1_type 4 175 -3 342 217 135 68 chr2 150100994 150101201 -103155382 - L1MC5 LINE L1 -21 7940 7720 690 254 111 22 chr2 150101544 150101903 -103154680 - L1ME4a LINE L1 -3 6118 5728 2183 224 21 21 chr2 150101943 150102462 -103154121 - LTR40a LTR ERVL 0 519 1 561 342 28 31 chr2 150102653 150102911 -103153672 + MIR SINE MIR 2 262 0 21 36 0 0 chr2 150103728 150103756 -103152827 + AT_rich Low_complexity Low_complexity 1 28 0 31 82 0 0 chr2 150103890 150103963 -103152620 + AT_rich Low_complexity Low_complexity 1 73 0 1886 160 7 10 chr2 150104041 150104347 -103152236 + AluSx SINE Alu 1 305 -7 372 273 40 48 chr2 150104663 150104907 -103151676 - L1MEc LINE L1 -4725 1643 1246 1268 259 119 18 chr2 150104907 150105301 -103151282 + MLT1E LTR MaLR 1 434 -159 310 203 13 13 chr2 150105303 150105382 -103151201 - L1MEc LINE L1 -5824 572 494 1811 199 34 27 chr2 150105382 150105795 -103150788 + MSTB1 LTR MaLR 1 416 -16 1210 278 76 17 chr2 150105818 150106228 -103150355 - L1MEc LINE L1 -5932 464 31 2412 128 3 11 chr2 150106246 150106613 -103149970 + THE1B LTR MaLR 1 364 0 180 186 0 0 chr2 150107310 150107369 -103149214 + (TA)n Simple_repeat Simple_repeat 1 59 0 189 0 0 0 chr2 150107373 150107394 -103149189 + (GA)n Simple_repeat Simple_repeat 2 22 0 1830 128 4 7 chr2 150107394 150107667 -103148916 - AluSx SINE Alu -40 272 1 636 295 81 46 chr2 150107794 150108276 -103148307 + L1M4 LINE L1 3722 4220 -1926 253 261 81 59 chr2 150108408 150108519 -103148064 + L1M4 LINE L1 4419 4526 -1620 2257 123 126 5 chr2 150108519 150108900 -103147683 - MSTA LTR MaLR 0 428 2 253 261 81 59 chr2 150108900 150109010 -103147573 + L1M4 LINE L1 4526 4645 -1501 500 138 254 91 chr2 150109467 150109699 -103146884 - MER33 DNA MER1_type -22 302 33 292 286 26 0 chr2 150109730 150109807 -103146776 + L2 LINE L2 3158 3236 -36 1743 168 10 3 chr2 150113233 150113524 -103143059 + AluJb SINE Alu 1 293 -19 2168 116 0 10 chr2 150114064 150114367 -103142216 + AluSx SINE Alu 4 303 -9 704 15 77 0 chr2 150114488 150114618 -103141965 + (TA)n Simple_repeat Simple_repeat 1 140 0 27 0 0 0 chr2 150115833 150115860 -103140723 + AT_rich Low_complexity Low_complexity 1 27 0 638 282 15 55 chr2 150116801 150117003 -103139580 - MIR SINE MIR -9 253 60 276 321 18 9 chr2 150118544 150118656 -103137927 + MIR3 SINE MIR 61 173 -35 2209 176 72 5 chr2 150118851 150119266 -103137317 - MSTB2 LTR MaLR 0 457 15 1311 220 140 10 chr2 150119458 150119871 -103136712 + MLT1C LTR MaLR 1 467 0 554 51 13 0 chr2 150120210 150120288 -103136295 + (TGGA)n Simple_repeat Simple_repeat 2 80 0 218 158 0 0 chr2 150120798 150120836 -103135747 + MER5B DNA MER1_type 7 44 -134 654 191 9 0 chr2 150120868 150120983 -103135600 - FLAM_A SINE Alu -14 119 4 2169 110 0 16 chr2 150121305 150121622 -103134961 - AluSx SINE Alu 0 312 1 508 234 83 55 chr2 150121686 150121976 -103134607 + L1MC5 LINE L1 7613 7910 -51 359 204 237 0 chr2 150123300 150123393 -103133190 - L2 LINE L2 0 3272 3158 2002 152 7 0 chr2 150123810 150124107 -103132476 - AluSx SINE Alu -13 299 1 301 102 102 0 chr2 150125095 150125203 -103131380 + (TA)n Simple_repeat Simple_repeat 1 119 0 249 33 0 0 chr2 150125206 150125236 -103131347 + (TG)n Simple_repeat Simple_repeat 2 31 0 1540 202 0 21 chr2 150125239 150125526 -103131057 - AluJo SINE Alu -30 282 2 25 0 0 0 chr2 150125800 150125825 -103130758 + AT_rich Low_complexity Low_complexity 1 25 0 254 236 95 68 chr2 150125927 150126111 -103130472 - MIR3 SINE MIR -11 197 5 300 70 0 0 chr2 150127904 150127947 -103128636 + (CA)n Simple_repeat Simple_repeat 1 43 0 305 237 0 10 chr2 150128638 150128654 -103127929 + (TATATG)n Simple_repeat Simple_repeat 3 18 -80 1777 161 60 24 chr2 150128654 150128990 -103127593 - MER7A DNA MER2_type 0 346 1 305 237 0 10 chr2 150128990 150129070 -103127513 + (TATATG)n Simple_repeat Simple_repeat 18 98 0 1393 211 42 10 chr2 150129645 150129934 -103126649 + AluJo SINE Alu 1 298 -4 880 326 102 5 chr2 150129974 150130415 -103126168 + MLT1K LTR MaLR 97 580 -8 2236 107 0 3 chr2 150130750 150131049 -103125534 - AluSq SINE Alu -15 298 1 21 57 0 0 chr2 150131333 150131368 -103125215 + AT_rich Low_complexity Low_complexity 1 35 0 309 265 59 0 chr2 150131590 150131658 -103124925 - MIR SINE MIR -102 106 35 23 33 0 0 chr2 150131723 150131753 -103124830 + AT_rich Low_complexity Low_complexity 1 30 0 258 254 0 0 chr2 150131793 150131856 -103124727 - Charlie8 DNA MER1_type -989 1428 1366 1052 88 116 44 chr2 150132125 150132306 -103124277 + MER30 DNA MER1_type 1 194 -36 868 321 82 22 chr2 150132669 150133220 -103123363 - L2 LINE L2 0 3313 2728 209 217 0 22 chr2 150133271 150133317 -103123266 - L2 LINE L2 -1 3271 3227 209 231 39 77 chr2 150133327 150133405 -103123178 + L2 LINE L2 3179 3253 -19 23 0 0 0 chr2 150134532 150134555 -103122028 + AT_rich Low_complexity Low_complexity 1 23 0 369 0 0 0 chr2 150134851 150134892 -103121691 + (TG)n Simple_repeat Simple_repeat 1 41 0 28 79 0 0 chr2 150135439 150135502 -103121081 + AT_rich Low_complexity Low_complexity 1 63 0 7414 35 7 1 chr2 150135566 150136856 -103119727 + L1PA4 LINE L1 4861 6155 0 316 282 242 7 chr2 150137179 150137328 -103119255 - MLT1L LTR MaLR -431 184 1 258 32 0 0 chr2 150139544 150139575 -103117008 + (TTA)n Simple_repeat Simple_repeat 1 31 0 840 143 60 0 chr2 150139581 150139714 -103116869 - FRAM SINE Alu -35 141 1 23 0 0 0 chr2 150140550 150140573 -103116010 + AT_rich Low_complexity Low_complexity 1 23 0 208 277 0 0 chr2 150140946 150140993 -103115590 + MIR3 SINE MIR 162 208 0 605 276 49 16 chr2 150141838 150142023 -103114560 + MIR SINE MIR 20 210 -52 2002 134 3 0 chr2 150143881 150144195 -103112388 + AluSq SINE Alu 1 315 0 24 0 0 0 chr2 150144873 150144897 -103111686 + AT_rich Low_complexity Low_complexity 1 24 0 1654 195 7 30 chr2 150146661 150146963 -103109620 + AluJo SINE Alu 1 295 -17 333 118 0 0 chr2 150146974 150147025 -103109558 + (CA)n Simple_repeat Simple_repeat 2 52 0 192 309 0 0 chr2 150147098 150147140 -103109443 - L2 LINE L2 -8 3264 3223 218 340 98 38 chr2 150147476 150147741 -103108842 + L2 LINE L2 2596 2876 -438 187 239 109 0 chr2 150148960 150149006 -103107577 - MIR SINE MIR -122 86 36 37 39 0 0 chr2 150149100 150149151 -103107432 + AT_rich Low_complexity Low_complexity 1 51 0 424 274 103 17 chr2 150149664 150149781 -103106802 + L2 LINE L2 3145 3271 -1 198 0 0 0 chr2 150150616 150150638 -103105945 + (A)n Simple_repeat Simple_repeat 1 22 0 2305 104 0 7 chr2 150150822 150151131 -103105452 - AluSq SINE Alu -6 307 1 2020 130 3 7 chr2 150151241 150151534 -103105049 + AluJb SINE Alu 3 294 -18 296 260 26 0 chr2 150152926 150153003 -103103580 + L1ME LINE L1 5592 5670 -451 2487 67 0 0 chr2 150153761 150154059 -103102524 - AluY SINE Alu -13 298 1 2316 87 0 7 chr2 150154225 150154525 -103102058 + AluY SINE Alu 1 298 -13 21 57 0 0 chr2 150154966 150155001 -103101582 + AT_rich Low_complexity Low_complexity 1 35 0 730 307 86 47 chr2 150156044 150156451 -103100132 - L2 LINE L2 0 3313 2891 330 322 106 61 chr2 150156964 150157688 -103098895 + L2 LINE L2 2538 3305 -8 315 304 0 0 chr2 150157977 150158046 -103098537 - L2 LINE L2 -4 3268 3200 208 388 25 0 chr2 150158438 150158559 -103098024 + L3b LINE CR1 1257 1380 -203 22 56 0 0 chr2 150159165 150159201 -103097382 + AT_rich Low_complexity Low_complexity 1 36 0 311 281 94 0 chr2 150159235 150159331 -103097252 - L2 LINE L2 0 3272 3168 345 294 141 12 chr2 150159765 150159928 -103096655 + MLT1J LTR MaLR 306 489 -22 2206 108 7 0 chr2 150160377 150160674 -103095909 + AluSx SINE Alu 1 299 -13 450 0 0 0 chr2 150163544 150163594 -103092989 + (TG)n Simple_repeat Simple_repeat 2 51 0 27 0 0 0 chr2 150167668 150167695 -103088888 + AT_rich Low_complexity Low_complexity 1 27 0 236 250 42 28 chr2 150167801 150167873 -103088710 + Charlie4 DNA MER1_type 1889 1961 0 407 273 31 57 chr2 150168707 150168901 -103087682 - L2 LINE L2 -12 3301 3113 1742 210 99 19 chr2 150169381 150169795 -103086788 + MLT1F LTR MaLR 4 450 -92 246 350 144 5 chr2 150170446 150170640 -103085943 + L2 LINE L2 1782 2002 -1312 258 105 0 0 chr2 150170859 150170897 -103085686 + (A)n Simple_repeat Simple_repeat 1 38 0 344 260 107 95 chr2 150172622 150172791 -103083792 - MER5B DNA MER1_type -1 177 7 965 142 60 27 chr2 150172804 150172987 -103083596 + MER5A DNA MER1_type 1 189 0 262 307 109 10 chr2 150172987 150173088 -103083495 + MIR SINE MIR 31 141 -121 373 301 172 34 chr2 150173096 150173305 -103083278 - MIR SINE MIR -5 257 20 328 159 0 34 chr2 150173333 150173421 -103083162 + CT-rich Low_complexity Low_complexity 2 86 0 222 235 0 0 chr2 150173527 150173578 -103083005 + A-rich Low_complexity Low_complexity 1 51 0 2183 124 3 0 chr2 150174380 150174686 -103081897 + AluSx SINE Alu 1 307 -5 535 304 92 11 chr2 150176648 150176832 -103079751 + MIR SINE MIR 59 257 -5 2892 9 0 0 chr2 150177992 150178308 -103078275 + AluYb8 SINE Alu 1 316 -2 1135 260 185 31 chr2 150178569 150179365 -103077218 + HAL1 LINE L1 1483 2400 -107 1569 171 9 60 chr2 150179375 150179691 -103076892 - AluJb SINE Alu -12 300 1 234 268 14 0 chr2 150179694 150179765 -103076818 + HAL1 LINE L1 2430 2501 -6 492 273 32 28 chr2 150179784 150180006 -103076577 + L1ME1 LINE L1 5678 5898 -223 537 304 39 17 chr2 150181629 150181810 -103074773 + L1ME1 LINE L1 5927 6111 -55 2039 132 3 25 chr2 150181824 150182143 -103074440 - AluSx SINE Alu 0 312 1 180 0 0 0 chr2 150182452 150182472 -103074111 + (A)n Simple_repeat Simple_repeat 1 20 0 28 79 0 0 chr2 150182668 150182731 -103073852 + AT_rich Low_complexity Low_complexity 1 63 0 25 0 0 0 chr2 150182966 150182991 -103073592 + AT_rich Low_complexity Low_complexity 1 25 0 1435 202 30 58 chr2 150182992 150183613 -103072970 + L1MC2 LINE L1 4753 5329 -817 686 178 0 0 chr2 150183613 150183731 -103072852 + FLAM_C SINE Alu 1 118 -25 1425 201 0 41 chr2 150183784 150184078 -103072505 + AluJo SINE Alu 1 282 -30 225 0 0 0 chr2 150184081 150184106 -103072477 + (TAAAA)n Simple_repeat Simple_repeat 1 25 0 2741 168 13 33 chr2 150184115 150184658 -103071925 + L1MC2 LINE L1 5324 5855 -489 2461 121 30 0 chr2 150184658 150185022 -103071561 + THE1C LTR MaLR 1 375 0 8249 123 46 32 chr2 150185022 150185839 -103070744 + THE1C-int LTR MaLR 1 842 -738 2212 110 0 0 chr2 150185839 150186121 -103070462 + AluSx SINE Alu 1 302 0 181 0 0 0 chr2 150186121 150186141 -103070442 + (TAAA)n Simple_repeat Simple_repeat 1 44 0 8249 123 46 32 chr2 150186141 150186891 -103069692 + THE1C-int LTR MaLR 842 1580 0 2532 117 19 0 chr2 150186891 150187259 -103069324 + THE1C LTR MaLR 1 375 0 1728 196 67 28 chr2 150187261 150187726 -103068857 + L1MC2 LINE L1 5860 6342 -2 2590 75 11 30 chr2 150188213 150188585 -103067998 + L1PA8 LINE L1 5806 6170 -2 506 278 98 50 chr2 150189948 150190365 -103066218 + HAL1b LINE L1 171 607 -741 2085 149 0 0 chr2 150190854 150191156 -103065427 - AluSx SINE Alu -8 304 3 297 44 22 0 chr2 150191190 150191235 -103065348 + MADE1 DNA Mariner 35 80 0 21 36 0 0 chr2 150191561 150191589 -103064994 + AT_rich Low_complexity Low_complexity 1 28 0 705 244 115 33 chr2 150191670 150192034 -103064549 + HAL1b LINE L1 676 1069 -279 186 103 0 0 chr2 150192389 150192418 -103064165 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 207 0 0 0 chr2 150193650 150193673 -103062910 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1401 143 0 50 chr2 150194154 150194392 -103062191 + AluJo SINE Alu 73 298 -14 757 110 0 65 chr2 150194399 150194648 -103061935 + (GGGGA)n Simple_repeat Simple_repeat 1 232 0 698 119 6 57 chr2 150194661 150194838 -103061745 + (GGGGA)n Simple_repeat Simple_repeat 4 171 0 203 213 82 66 chr2 150194893 150194954 -103061629 + MIR SINE MIR 190 251 -11 232 302 187 8 chr2 150195178 150195297 -103061286 + MIR3 SINE MIR 1 97 -111 1771 122 4 8 chr2 150195297 150195544 -103061039 + AluSx SINE Alu 52 297 -15 232 302 187 8 chr2 150195544 150195597 -103060986 + MIR3 SINE MIR 97 203 -5 26 64 0 0 chr2 150195777 150195824 -103060759 + AT_rich Low_complexity Low_complexity 1 47 0 2218 104 7 3 chr2 150197222 150197530 -103059053 + AluSc SINE Alu 1 309 0 339 263 49 77 chr2 150198121 150198315 -103058268 + MIR SINE MIR 2 191 -66 211 314 37 56 chr2 150198501 150198645 -103057938 + MIR SINE MIR 47 186 -68 383 295 14 22 chr2 150199199 150199338 -103057245 - L2 LINE L2 -1341 1973 1836 1673 199 14 25 chr2 150199684 150199776 -103056807 + MLT1A1 LTR MaLR 1 92 -273 1986 173 61 51 chr2 150199776 150200204 -103056379 + MSTB1 LTR MaLR 1 432 0 1673 199 14 25 chr2 150200204 150200478 -103056105 + MLT1A1 LTR MaLR 92 363 -2 2061 110 24 0 chr2 150200603 150200894 -103055689 - AluSx SINE Alu -14 298 1 21 36 0 0 chr2 150201047 150201075 -103055508 + AT_rich Low_complexity Low_complexity 1 28 0 5089 65 1 1 chr2 150201982 150202641 -103053942 + L1PA8 LINE L1 5514 6172 0 303 140 0 0 chr2 150204517 150204567 -103052016 + (TG)n Simple_repeat Simple_repeat 1 50 0 2355 75 0 0 chr2 150205659 150205952 -103050631 + AluSc SINE Alu 1 293 -16 337 270 0 0 chr2 150205952 150206026 -103050557 + MER21B LTR ERV1 16 89 -774 393 192 27 0 chr2 150206045 150206118 -103050465 + MER21B LTR ERV1 20 94 -769 3136 192 36 34 chr2 150206119 150206821 -103049762 + MER21B LTR ERV1 48 750 -113 2282 96 0 0 chr2 150206913 150207204 -103049379 + AluY SINE Alu 6 296 -15 183 129 0 0 chr2 150207774 150207805 -103048778 + (CA)n Simple_repeat Simple_repeat 1 31 0 1049 153 40 75 chr2 150208067 150208295 -103048288 - AluJo SINE Alu -92 220 1 300 140 53 0 chr2 150208884 150208941 -103047642 + Charlie5 DNA MER1_type 11 70 -2542 * 728 134 40 0 chr2 150208939 150209088 -103047495 + Charlie5 DNA MER1_type 2469 2623 0 402 296 73 53 chr2 150210242 150210489 -103046094 - MIR SINE MIR -9 253 2 197 176 0 0 chr2 150210675 150210709 -103045874 - L2 LINE L2 -7 3265 3232 * 476 253 81 69 chr2 150210680 150210904 -103045679 - MIR SINE MIR -6 256 27 538 212 137 27 chr2 150211312 150211458 -103045125 - MER5A DNA MER1_type -14 175 14 457 255 66 85 chr2 150212374 150212716 -103043867 + L1ME LINE L1 5123 5470 -692 1837 27 9 0 chr2 150212716 150212941 -103043642 - L1PA4 LINE L1 -3 6152 5926 457 255 66 85 chr2 150212941 150213302 -103043281 + L1ME LINE L1 5470 5817 -345 1827 141 43 63 chr2 150213324 150213655 -103042928 + MLT1B LTR MaLR 1 324 -66 384 19 0 0 chr2 150213655 150213707 -103042876 - L1PA15 LINE L1 -1 6164 6113 1827 141 43 63 chr2 150213707 150213773 -103042810 + MLT1B LTR MaLR 324 390 0 535 188 31 0 chr2 150213773 150213869 -103042714 - MER5A DNA MER1_type -13 176 78 668 212 0 0 chr2 150213893 150214025 -103042558 + MER45A DNA AcHobo 47 178 0 468 192 13 0 chr2 150214025 150214103 -103042480 - MER5A DNA MER1_type -109 80 2 31 26 0 0 chr2 150214178 150214216 -103042367 + AT_rich Low_complexity Low_complexity 1 38 0 2404 212 120 46 chr2 150214455 150215238 -103041345 + MER21B LTR ERV1 12 852 -11 21 36 0 0 chr2 150215350 150215378 -103041205 + AT_rich Low_complexity Low_complexity 1 28 0 361 286 14 28 chr2 150215944 150216157 -103040426 + L1ME4a LINE L1 5536 5745 -376 278 229 223 6 chr2 150216187 150216353 -103040230 + L1ME4a LINE L1 5837 6038 -83 21 57 0 0 chr2 150216395 150216430 -103040153 + AT_rich Low_complexity Low_complexity 1 35 0 805 242 28 6 chr2 150216555 150216733 -103039850 + AluJo SINE Alu 1 182 -130 189 0 0 0 chr2 150216738 150216759 -103039824 + (T)n Simple_repeat Simple_repeat 1 21 0 1103 172 6 0 chr2 150216759 150216939 -103039644 + AluJb SINE Alu 132 312 0 488 231 112 7 chr2 150217212 150217355 -103039228 - MIR SINE MIR -55 207 50 504 296 57 26 chr2 150217646 150217910 -103038673 + MLT1G1 LTR MaLR 13 284 -311 484 296 31 0 chr2 150217979 150218141 -103038442 + MLT1G1 LTR MaLR 429 595 0 2467 47 3 13 chr2 150218959 150219259 -103037324 + AluY SINE Alu 1 297 -14 2196 71 0 54 chr2 150219637 150219971 -103036612 - AluSc SINE Alu 0 319 2 217 273 159 0 chr2 150220615 150220703 -103035880 + L2 LINE L2 3208 3309 -4 2110 97 30 10 chr2 150220830 150221130 -103035453 - AluY SINE Alu -5 306 1 891 206 6 3 chr2 150221408 150221663 -103034920 + L1M4c LINE L1 2272 2527 -3855 2052 127 19 70 chr2 150221673 150222090 -103034493 + MER57A LTR ERV1 1 396 -7 941 256 140 44 chr2 150222090 150222659 -103033924 + L2 LINE L2 2483 3096 -217 2032 174 57 35 chr2 150222671 150223126 -103033457 - MLT1C LTR MaLR -2 465 1 196 301 106 57 chr2 150223554 150223677 -103032906 + L2 LINE L2 2522 2650 -664 359 248 92 28 chr2 150223793 150223902 -103032681 + MIR SINE MIR 51 166 -96 192 371 108 16 chr2 150224032 150224226 -103032357 + L2 LINE L2 2831 3042 -230 337 298 194 40 chr2 150226053 150226301 -103030282 + L2 LINE L2 2933 3218 -54 186 43 0 0 chr2 150226409 150226432 -103030151 + (TG)n Simple_repeat Simple_repeat 2 24 0 373 326 133 32 chr2 150226474 150226790 -103029793 + L3 LINE CR1 1220 1567 -10 438 231 29 19 chr2 150227139 150227243 -103029340 + L2 LINE L2 3209 3313 0 1763 170 48 3 chr2 150227410 150227704 -103028879 - AluJb SINE Alu -5 307 1 21 36 0 0 chr2 150228727 150228755 -103027828 + AT_rich Low_complexity Low_complexity 1 28 0 325 154 88 22 chr2 150228945 150229036 -103027547 - L1MC5 LINE L1 -48 7913 7817 268 133 0 0 chr2 150229325 150229370 -103027213 + Alu SINE Alu 1 45 -257 2346 96 0 0 chr2 150229382 150229684 -103026899 - AluY SINE Alu -9 302 1 314 325 96 32 chr2 150229720 150229827 -103026756 + L1MC4 LINE L1 7709 7808 -234 2483 58 0 0 chr2 150229827 150230120 -103026463 - AluY SINE Alu -16 295 3 314 325 96 32 chr2 150230120 150230326 -103026257 + L1MC4 LINE L1 7808 8042 0 290 267 22 22 chr2 150231302 150231392 -103025191 + MIR SINE MIR 173 262 0 33 18 0 36 chr2 150231408 150231433 -103025150 + AT_rich Low_complexity Low_complexity 1 25 -28 3503 149 54 14 chr2 150231433 150232096 -103024487 + L1MB3 LINE L1 5491 6180 -3 33 18 0 36 chr2 150232096 150232125 -103024458 + AT_rich Low_complexity Low_complexity 25 53 0 339 287 91 49 chr2 150232195 150232338 -103024245 + L1M4 LINE L1 5610 5758 -416 2073 137 0 0 chr2 150233004 150233327 -103023256 - AluSx SINE Alu 0 312 1 219 232 101 29 chr2 150233634 150233703 -103022880 + L2 LINE L2 3238 3311 -2 201 94 0 0 chr2 150234034 150234066 -103022517 + (TA)n Simple_repeat Simple_repeat 1 32 0 180 234 106 0 chr2 150234418 150234465 -103022118 - L2 LINE L2 -8 3305 3254 2168 98 3 23 chr2 150234624 150234931 -103021652 + AluSx SINE Alu 2 302 -10 357 332 89 22 chr2 150235502 150235773 -103020810 + L1ME1 LINE L1 59 347 -6049 518 253 55 19 chr2 150236109 150236366 -103020217 + L1ME1 LINE L1 660 925 -5471 638 176 0 0 chr2 150236425 150236527 -103020056 - AluSq/x SINE Alu -188 124 23 24 32 0 0 chr2 150236595 150236626 -103019957 + AT_rich Low_complexity Low_complexity 1 31 0 4708 202 108 11 chr2 150236651 150238069 -103018514 - L1M4 LINE L1 -750 5396 3892 2384 217 83 102 chr2 150238070 150238117 -103018466 + L1ME1 LINE L1 3721 3767 -2448 1267 205 101 12 chr2 150238117 150238454 -103018129 - MLT1A2 LTR MaLR -4 370 4 2384 217 83 102 chr2 150238454 150238684 -103017899 + L1ME1 LINE L1 3767 4000 -2215 2459 66 3 3 chr2 150238684 150238988 -103017595 + AluSg SINE Alu 1 304 -6 2384 217 83 102 chr2 150238988 150239967 -103016616 + L1ME1 LINE L1 4000 4947 -1268 2295 99 3 3 chr2 150239967 150240269 -103016314 - AluSg SINE Alu -8 302 1 2384 217 83 102 chr2 150240269 150240487 -103016096 + L1ME1 LINE L1 4947 5168 -1047 250 30 0 0 chr2 150240489 150240522 -103016061 + AluY SINE Alu 2 34 -268 * 289 188 16 0 chr2 150240510 150240574 -103016009 + AluYb8 SINE Alu 243 307 -1 2829 238 53 29 chr2 150240683 150241587 -103014996 + L1ME1 LINE L1 5323 6403 0 1921 269 85 47 chr2 150241700 150242703 -103013880 - L2 LINE L2 -6 3307 2262 191 392 70 49 chr2 150243416 150243760 -103012823 + L2 LINE L2 2921 3271 -1 810 125 0 83 chr2 150243990 150244134 -103012449 - FLAM_C SINE Alu 0 133 2 1749 138 52 33 chr2 150244430 150244793 -103011790 + THE1C LTR MaLR 1 370 -5 22 56 0 0 chr2 150245583 150245619 -103010964 + AT_rich Low_complexity Low_complexity 1 36 0 1621 210 57 66 chr2 150245724 150246236 -103010347 + L1ME2 LINE L1 5514 6024 -142 2269 102 0 3 chr2 150246236 150246539 -103010044 + AluY SINE Alu 1 302 -9 1621 210 57 66 chr2 150246539 150246676 -103009907 + L1ME2 LINE L1 6024 6161 -5 2153 129 3 0 chr2 150246687 150246990 -103009593 - AluSx SINE Alu -8 304 1 1148 191 29 0 chr2 150247850 150248054 -103008529 + AluJo SINE Alu 85 294 -18 597 14 0 0 chr2 150249170 150249240 -103007343 + (GGAA)n Simple_repeat Simple_repeat 1 70 0 351 0 0 0 chr2 150250000 150250039 -103006544 + (CA)n Simple_repeat Simple_repeat 2 40 0 29 28 0 0 chr2 150251349 150251385 -103005198 + AT_rich Low_complexity Low_complexity 1 36 0 1294 246 9 15 chr2 150251778 150252120 -103004463 + MER58B DNA MER1_type 2 341 0 1583 143 4 21 chr2 150253427 150253665 -103002918 - AluJo SINE Alu -30 282 49 5621 196 44 25 chr2 150254026 150255448 -103001135 - Charlie1a DNA MER1_type -5 1450 2 526 203 62 16 chr2 150255602 150255730 -103000853 - MIR SINE MIR -49 213 80 250 276 75 82 chr2 150255869 150256003 -103000580 - MIR SINE MIR -67 141 9 207 289 67 48 chr2 150256260 150256364 -103000219 - MIR SINE MIR -117 145 40 2536 60 0 0 chr2 150258111 150258413 -102998170 + AluY SINE Alu 1 302 -9 195 350 113 10 chr2 150258553 150258650 -102997933 - L2 LINE L2 -29 3243 3137 1280 195 93 2 chr2 150258744 150259180 -102997403 + MER21B LTR ERV1 27 572 -291 191 308 122 70 chr2 150259712 150259751 -102996832 + L3b LINE CR1 1411 1447 -136 198 0 0 0 chr2 150259751 150259773 -102996810 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2043 117 4 0 chr2 150259775 150260056 -102996527 - AluSx SINE Alu -30 282 1 191 308 122 70 chr2 150260056 150260169 -102996414 + L3b LINE CR1 1447 1574 -9 1665 153 63 11 chr2 150260782 150261069 -102995514 + AluSg SINE Alu 1 302 -8 1527 129 184 7 chr2 150261947 150262241 -102994342 + MER7A DNA MER2_type 2 345 -1 199 326 79 0 chr2 150262638 150262727 -102993856 + MIR3 SINE MIR 111 206 -2 363 301 124 83 chr2 150264008 150264237 -102992346 + L1M2 LINE L1 675 893 -5956 189 0 0 0 chr2 150264237 150264258 -102992325 + (TCC)n Simple_repeat Simple_repeat 3 23 0 363 301 124 83 chr2 150264258 150264569 -102992014 + L1M2 LINE L1 893 1237 -5612 484 174 0 0 chr2 150265860 150265946 -102990637 - Tigger5 DNA MER2_type -1 2322 2237 322 167 0 42 chr2 150265959 150266031 -102990552 + Tigger5 DNA MER2_type 20 88 -2235 356 194 0 0 chr2 150266049 150266121 -102990462 - Tigger5 DNA MER2_type -1 2322 2251 21 57 0 0 chr2 150266167 150266202 -102990381 + AT_rich Low_complexity Low_complexity 1 35 0 388 224 28 47 chr2 150266267 150266374 -102990209 - MIR SINE MIR -122 140 36 194 384 12 0 chr2 150267665 150267751 -102988832 - L2 LINE L2 -48 3265 3179 640 318 145 18 chr2 150267885 150268047 -102988536 - L2 LINE L2 -1 3312 3172 2556 50 0 7 chr2 150268047 150268347 -102988236 + AluY SINE Alu 1 298 -13 640 318 145 18 chr2 150268347 150268618 -102987965 - L2 LINE L2 -141 3172 2824 2123 86 61 0 chr2 150268673 150268953 -102987630 + AluSx SINE Alu 1 297 -15 2043 104 17 30 chr2 150269412 150269711 -102986872 - AluSc SINE Alu -14 295 1 1614 182 20 0 chr2 150272411 150272707 -102983876 - AluSx SINE Alu -10 302 1 2149 117 0 0 chr2 150274472 150274789 -102981794 + AluSx SINE Alu 2 318 0 2271 118 0 0 chr2 150276293 150276598 -102979985 + AluSc SINE Alu 1 305 -4 960 154 11 6 chr2 150277422 150277597 -102978986 + MER2 DNA MER2_type 1 176 -169 930 96 7 22 chr2 150277597 150277732 -102978851 + FLAM_C SINE Alu 1 133 0 236 276 79 13 chr2 150277753 150277829 -102978754 + MER2 DNA MER2_type 265 345 0 1807 86 19 67 chr2 150277842 150278370 -102978213 - MER4A LTR ERV1 -2 662 165 687 168 0 0 chr2 150278371 150278490 -102978093 + AluJb SINE Alu 193 311 -1 1267 82 0 11 chr2 150278490 150278674 -102977909 - MER4A LTR ERV1 -482 182 1 316 347 90 61 chr2 150278778 150279448 -102977135 + L2 LINE L2 2554 3242 -30 286 221 0 26 chr2 150279540 150279617 -102976966 - MLT1K LTR MaLR -5 583 509 736 232 28 23 chr2 150279814 150279991 -102976592 + MER5B DNA MER1_type 1 178 0 26 30 0 0 chr2 150281005 150281038 -102975545 + AT_rich Low_complexity Low_complexity 1 33 0 31 26 0 0 chr2 150281106 150281144 -102975439 + AT_rich Low_complexity Low_complexity 1 38 0 32 43 0 0 chr2 150281256 150281302 -102975281 + AT_rich Low_complexity Low_complexity 1 46 0 241 250 78 0 chr2 150283680 150283744 -102972839 - MER91C DNA MER1_type -36 104 36 245 348 58 51 chr2 150283966 150284104 -102972479 - L2 LINE L2 -6 3266 3128 595 280 27 27 chr2 150284343 150284568 -102972015 + L1MC4a LINE L1 5706 5930 -1878 317 318 20 74 chr2 150284721 150284839 -102971744 - MIR3 SINE MIR -48 160 50 1816 77 0 0 chr2 150284839 150285059 -102971524 - AluSg/x SINE Alu -8 302 83 317 318 20 74 chr2 150285059 150285088 -102971495 - MIR3 SINE MIR -158 50 21 590 260 31 31 chr2 150285594 150285790 -102970793 + MIR SINE MIR 57 252 -10 2197 108 0 3 chr2 150285980 150286275 -102970308 - AluSq SINE Alu -19 294 1 389 255 49 0 chr2 150286290 150286392 -102970191 - L2 LINE L2 -20 3252 3146 605 198 70 0 chr2 150286537 150286694 -102969889 - Charlie1 DNA MER1_type -5 2756 2589 1310 156 16 53 chr2 150287161 150287404 -102969179 - AluJb SINE Alu -13 299 66 822 280 97 3 chr2 150288266 150288555 -102968028 + MLT1I LTR MaLR 80 395 -14 350 264 101 31 chr2 150288626 150288755 -102967828 + MIR SINE MIR 20 157 -105 2171 102 0 7 chr2 150289104 150289399 -102967184 - AluSq SINE Alu -20 293 1 182 310 69 35 chr2 150289414 150289472 -102967111 + L2 LINE L2 3163 3222 -50 25 0 0 0 chr2 150289776 150289801 -102966782 + AT_rich Low_complexity Low_complexity 1 25 0 1997 127 0 7 chr2 150292232 150292550 -102964033 - AluSx SINE Alu 0 316 1 1911 140 0 3 chr2 150293256 150293549 -102963034 - AluSx SINE Alu -20 292 1 321 350 44 0 chr2 150293659 150293796 -102962787 + LTR16A LTR ERVL 193 335 -115 1041 72 0 0 chr2 150293798 150293937 -102962646 + (TTCC)n Simple_repeat Simple_repeat 1 139 0 2169 115 0 7 chr2 150294719 150295014 -102961569 + AluSg SINE Alu 1 293 -17 434 48 0 0 chr2 150295112 150295175 -102961408 - AluSc SINE Alu -6 303 241 407 119 0 0 chr2 150295275 150295334 -102961249 - AluS SINE Alu -254 59 1 405 256 32 32 chr2 150295603 150295728 -102960855 + MER5A DNA MER1_type 37 161 -28 2229 147 0 0 chr2 150295747 150296059 -102960524 - AluSx SINE Alu 0 312 1 448 140 0 21 chr2 150296059 150296139 -102960444 + (TTCC)n Simple_repeat Simple_repeat 2 81 -11 1493 199 0 35 chr2 150296139 150296450 -102960133 - AluJb SINE Alu -12 300 1 448 140 0 21 chr2 150296450 150296462 -102960121 + (TTCC)n Simple_repeat Simple_repeat 81 92 0 620 303 47 39 chr2 150297796 150298030 -102958553 - MIR SINE MIR -26 236 1 2022 154 3 7 chr2 150298031 150298337 -102958246 - AluSx SINE Alu -7 305 1 268 318 0 60 chr2 150298975 150299126 -102957457 + L2 LINE L2 3163 3304 -9 946 263 97 63 chr2 150299279 150299869 -102956714 - MLT1L LTR MaLR 0 615 6 374 331 28 21 chr2 150300002 150300147 -102956436 - MIR3 SINE MIR -42 166 21 257 345 45 0 chr2 150300780 150300890 -102955693 + MLT1K LTR MaLR 20 134 -454 24 53 0 0 chr2 150301017 150301055 -102955528 + AT_rich Low_complexity Low_complexity 1 38 0 533 55 14 0 chr2 150301328 150301401 -102955182 + (TC)n Simple_repeat Simple_repeat 2 75 0 22 0 0 0 chr2 150301613 150301635 -102954948 + AT_rich Low_complexity Low_complexity 1 22 0 202 203 16 16 chr2 150301989 150302053 -102954530 + GA-rich Low_complexity Low_complexity 1 64 0 21 36 0 0 chr2 150303375 150303403 -102953180 + AT_rich Low_complexity Low_complexity 1 28 0 234 274 27 14 chr2 150303689 150303762 -102952821 + L2 LINE L2 3197 3270 -2 673 286 34 0 chr2 150304878 150305056 -102951527 - MIR SINE MIR -60 202 19 192 211 96 0 chr2 150305138 150305190 -102951393 - MIR3 SINE MIR -29 179 123 1639 150 41 61 chr2 150306886 150307179 -102949404 + AluJo SINE Alu 1 287 -25 2197 101 3 13 chr2 150307191 150307489 -102949094 + AluSg SINE Alu 1 295 -15 940 35 21 21 chr2 150307513 150307656 -102948927 + (GAAA)n Simple_repeat Simple_repeat 1 143 0 1149 35 17 23 chr2 150307773 150307947 -102948636 + (GAAA)n Simple_repeat Simple_repeat 4 176 0 192 393 81 12 chr2 150307950 150308123 -102948460 - L2 LINE L2 -423 2891 2707 223 272 96 66 chr2 150308128 150308264 -102948319 - L2 LINE L2 -1 3312 3173 521 322 148 37 chr2 150308604 150309231 -102947352 - L2 LINE L2 -656 2658 1962 1869 195 57 35 chr2 150310475 150310932 -102945651 - MLT1C LTR MaLR 0 467 1 779 305 59 33 chr2 150312687 150313190 -102943393 + L2 LINE L2 2795 3308 -5 317 343 62 20 chr2 150313278 150313424 -102943159 + L2 LINE L2 3102 3253 -19 384 275 101 7 chr2 150313558 150313696 -102942887 + MIR3 SINE MIR 43 193 -15 237 250 19 0 chr2 150314374 150314426 -102942157 + MIR3 SINE MIR 111 163 -45 224 228 0 18 chr2 150315693 150315750 -102940833 + (CA)n Simple_repeat Simple_repeat 2 57 0 230 296 0 0 chr2 150319011 150319065 -102937518 + (TA)n Simple_repeat Simple_repeat 1 54 0 21 36 0 0 chr2 150320243 150320271 -102936312 + AT_rich Low_complexity Low_complexity 1 28 0 375 337 102 15 chr2 150323807 150324003 -102932580 + MIR SINE MIR 42 254 -8 2083 110 4 0 chr2 150325892 150326204 -102930379 - AluSx SINE Alu 0 313 1 23 33 0 0 chr2 150326498 150326528 -102930055 + AT_rich Low_complexity Low_complexity 1 30 0 2084 146 0 10 chr2 150326973 150327282 -102929301 - AluJo SINE Alu -6 306 1 21 0 0 0 chr2 150329059 150329080 -102927503 + AT_rich Low_complexity Low_complexity 1 21 0 2034 145 0 0 chr2 150329627 150329924 -102926659 - AluSx SINE Alu -15 297 1 24 0 0 0 chr2 150335345 150335369 -102921214 + AT_rich Low_complexity Low_complexity 1 24 0 22 56 0 0 chr2 150337280 150337316 -102919267 + AT_rich Low_complexity Low_complexity 1 36 0 282 330 87 0 chr2 150338214 150338317 -102918266 - L2 LINE L2 0 3272 3161 434 348 68 49 chr2 150338506 150338917 -102917666 - L2 LINE L2 -362 2952 2534 253 333 0 0 chr2 150340154 150340235 -102916348 + L2 LINE L2 3230 3310 -3 243 241 60 12 chr2 150341131 150341214 -102915369 + MLT1K LTR MaLR 495 581 -7 1248 162 29 5 chr2 150341679 150341889 -102914694 + AluJb SINE Alu 85 299 -13 2389 75 7 0 chr2 150341896 150342191 -102914392 - AluY SINE Alu -14 297 1 250 276 66 13 chr2 150342884 150342960 -102913623 - L2 LINE L2 0 3313 3234 417 95 0 0 chr2 150343025 150343088 -102913495 + (TA)n Simple_repeat Simple_repeat 1 63 0 234 0 0 0 chr2 150343106 150343132 -102913451 + (CA)n Simple_repeat Simple_repeat 2 27 0 2360 80 3 0 chr2 150343970 150344269 -102912314 + AluSp SINE Alu 1 300 -13 538 223 243 0 chr2 150344471 150344619 -102911964 + MER5A DNA MER1_type 1 184 -5 277 351 105 0 chr2 150344823 150344937 -102911646 + L2 LINE L2 3141 3266 -6 296 311 75 28 chr2 150344968 150345074 -102911509 + MIR3 SINE MIR 89 199 -9 215 65 0 0 chr2 150345262 150345293 -102911290 + L2 LINE L2 3282 3312 -1 924 175 41 0 chr2 150346269 150346440 -102910143 - MER45A DNA AcHobo 0 178 1 461 347 7 7 chr2 150346575 150346725 -102909858 - MIR3 SINE MIR -49 159 10 264 100 0 0 chr2 150346926 150346966 -102909617 + (TG)n Simple_repeat Simple_repeat 2 41 0 21 57 0 0 chr2 150346968 150347003 -102909580 + AT_rich Low_complexity Low_complexity 1 35 0 199 438 17 6 chr2 150347480 150347656 -102908927 + L2 LINE L2 337 514 -2800 201 171 0 0 chr2 150347666 150347701 -102908882 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 199 325 26 0 chr2 150347940 150348017 -102908566 + L2 LINE L2 675 753 -2561 190 358 15 0 chr2 150348944 150349011 -102907572 - MIR SINE MIR 0 262 195 261 289 70 35 chr2 150349046 150349160 -102907423 + L2 LINE L2 3194 3311 -2 1534 105 22 0 chr2 150349427 150349655 -102906928 - L1MA6 LINE L1 -337 5963 5731 1464 174 42 19 chr2 150349655 150349963 -102906620 + L1MA6 LINE L1 5979 6296 -4 2345 96 3 0 chr2 150350389 150350701 -102905882 + AluSq SINE Alu 1 313 0 1311 81 54 0 chr2 150350776 150350962 -102905621 + L1PB1 LINE L1 5956 6151 0 31 26 0 0 chr2 150350967 150351005 -102905578 + AT_rich Low_complexity Low_complexity 1 38 0 369 359 64 13 chr2 150351012 150351168 -102905415 - MIR SINE MIR -72 190 27 21 0 0 0 chr2 150351765 150351786 -102904797 + AT_rich Low_complexity Low_complexity 1 21 0 210 37 0 0 chr2 150352065 150352092 -102904491 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 878 163 34 0 chr2 150352229 150352376 -102904207 - FRAM SINE Alu -25 151 1 191 192 0 77 chr2 150352439 150352491 -102904092 - MIR SINE MIR -92 170 123 215 326 35 12 chr2 150352966 150353052 -102903531 - L2 LINE L2 -807 2507 2420 238 320 13 13 chr2 150354072 150354147 -102902436 + L2 LINE L2 2567 2641 -673 2160 92 0 3 chr2 150354500 150354829 -102901754 + AluSx SINE Alu 1 328 0 502 324 17 22 chr2 150355441 150355620 -102900963 - MIR3 SINE MIR -12 196 19 24 0 0 0 chr2 150357970 150357994 -102898589 + AT_rich Low_complexity Low_complexity 1 24 0 26 30 0 0 chr2 150360014 150360047 -102896536 + AT_rich Low_complexity Low_complexity 1 33 0 378 270 10 0 chr2 150366400 150366500 -102890083 - MIR SINE MIR -63 145 45 1811 173 30 0 chr2 150367308 150367603 -102888980 + AluJo SINE Alu 1 304 -8 195 42 0 0 chr2 150371113 150371137 -102885446 + (A)n Simple_repeat Simple_repeat 1 24 0 279 0 0 0 chr2 150372468 150372499 -102884084 + (TA)n Simple_repeat Simple_repeat 2 32 0 234 0 0 0 chr2 150372499 150372525 -102884058 + (T)n Simple_repeat Simple_repeat 1 26 0 226 210 33 33 chr2 150372733 150372801 -102883782 - MIR SINE MIR -63 145 77 396 0 0 0 chr2 150373148 150373192 -102883391 + (GA)n Simple_repeat Simple_repeat 1 44 0 22 35 0 0 chr2 150373515 150373544 -102883039 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 150374315 150374336 -102882247 + AT_rich Low_complexity Low_complexity 1 21 0 25 51 0 0 chr2 150375140 150375179 -102881404 + AT_rich Low_complexity Low_complexity 1 39 0 198 0 0 0 chr2 150377249 150377271 -102879312 + (T)n Simple_repeat Simple_repeat 1 22 0 237 108 0 0 chr2 150377420 150377457 -102879126 + (TC)n Simple_repeat Simple_repeat 2 38 0 213 231 0 0 chr2 150378018 150378057 -102878526 + polypyrimidine Low_complexity Low_complexity 3 41 0 490 152 9 18 chr2 150378282 150378394 -102878189 + CT-rich Low_complexity Low_complexity 4 114 0 2320 99 0 3 chr2 150378716 150379020 -102877563 + AluSx SINE Alu 1 303 -9 523 258 124 46 chr2 150379848 150380065 -102876518 + MIR SINE MIR 29 262 0 247 309 73 18 chr2 150380326 150380436 -102876147 - MIR SINE MIR -90 172 57 1704 105 0 61 chr2 150382654 150382967 -102873616 - AluSx SINE Alu -7 305 12 214 169 24 72 chr2 150383284 150383367 -102873216 + (CATAT)n Simple_repeat Simple_repeat 2 80 0 298 44 106 18 chr2 150383367 150383480 -102873103 + (TA)n Simple_repeat Simple_repeat 2 124 0 531 170 11 0 chr2 150384138 150384232 -102872351 + FRAM SINE Alu 58 152 -24 21 0 0 0 chr2 150384578 150384599 -102871984 + AT_rich Low_complexity Low_complexity 1 21 0 180 97 0 0 chr2 150389400 150389431 -102867152 + (A)n Simple_repeat Simple_repeat 1 31 0 290 98 20 0 chr2 150394914 150394965 -102861618 + (TG)n Simple_repeat Simple_repeat 1 52 0 372 43 0 0 chr2 150396008 150396054 -102860529 + (TC)n Simple_repeat Simple_repeat 2 47 0 252 86 0 0 chr2 150400837 150400872 -102855711 + (GA)n Simple_repeat Simple_repeat 2 36 0 231 114 0 0 chr2 150401077 150401112 -102855471 + (CA)n Simple_repeat Simple_repeat 2 36 0 207 0 0 0 chr2 150401118 150401141 -102855442 + (GA)n Simple_repeat Simple_repeat 2 24 0 222 128 0 0 chr2 150401664 150401703 -102854880 + (TC)n Simple_repeat Simple_repeat 2 40 0 260 190 13 51 chr2 150402540 150402619 -102853964 + G-rich Low_complexity Low_complexity 1 76 0 27 29 0 0 chr2 150402695 150402729 -102853854 + GC_rich Low_complexity Low_complexity 1 34 0 182 36 0 36 chr2 150405971 150405999 -102850584 + (TCCC)n Simple_repeat Simple_repeat 4 30 0 24 0 0 0 chr2 150408146 150408170 -102848413 + AT_rich Low_complexity Low_complexity 1 24 0 31 26 0 0 chr2 150411080 150411118 -102845465 + AT_rich Low_complexity Low_complexity 1 38 0 318 324 56 7 chr2 150412408 150412550 -102844033 + MIR SINE MIR 53 201 -61 287 303 84 14 chr2 150413784 150413926 -102842657 - MIR SINE MIR -35 227 76 250 356 29 0 chr2 150414465 150414569 -102842014 + MIR SINE MIR 3 109 -153 2155 97 3 44 chr2 150414600 150414919 -102841664 + AluSg SINE Alu 1 306 -4 203 86 0 29 chr2 150419822 150419857 -102836726 + (TC)n Simple_repeat Simple_repeat 1 34 0 296 261 44 100 chr2 150421311 150421491 -102835092 - MIR SINE MIR -72 190 21 21 0 0 0 chr2 150421798 150421819 -102834764 + AT_rich Low_complexity Low_complexity 1 21 0 234 62 0 0 chr2 150422213 150422245 -102834338 + (CA)n Simple_repeat Simple_repeat 2 33 0 216 211 19 0 chr2 150424428 150424480 -102832103 + CT-rich Low_complexity Low_complexity 3 55 0 189 107 0 0 chr2 150425167 150425195 -102831388 + (T)n Simple_repeat Simple_repeat 1 28 0 226 24 71 24 chr2 150426475 150426517 -102830066 + A-rich Low_complexity Low_complexity 2 45 0 2143 137 0 13 chr2 150427630 150428029 -102828554 + AluJb SINE Alu 1 395 0 201 296 133 44 chr2 150429294 150429429 -102827154 + L2 LINE L2 3126 3272 0 189 234 43 0 chr2 150433048 150433095 -102823488 - L2 LINE L2 -2 3311 3263 344 59 20 0 chr2 150436278 150436329 -102820254 + (CAT)n Simple_repeat Simple_repeat 3 54 0 470 204 239 17 chr2 150436570 150436746 -102819837 - MIR SINE MIR -2 260 46 211 298 110 57 chr2 150437180 150437425 -102819158 - L2 LINE L2 -724 2590 2333 747 147 0 9 chr2 150437522 150437631 -102818952 - FLAM_C SINE Alu -18 125 18 261 180 0 0 chr2 150439553 150439603 -102816980 + (TA)n Simple_repeat Simple_repeat 2 51 0 186 43 0 0 chr2 150444814 150444837 -102811746 + (A)n Simple_repeat Simple_repeat 1 23 0 184 151 19 38 chr2 150445183 150445236 -102811347 + A-rich Low_complexity Low_complexity 1 52 0 429 20 0 0 chr2 150447205 150447255 -102809328 + (CA)n Simple_repeat Simple_repeat 2 51 0 326 295 50 79 chr2 150447264 150447466 -102809117 + MIR SINE MIR 1 195 -65 235 171 0 0 chr2 150448110 150448151 -102808432 - Charlie8 DNA MER1_type -2 2415 2375 627 244 105 0 chr2 150448202 150448273 -102808310 - Charlie8 DNA MER1_type -2227 190 128 252 0 0 0 chr2 150448273 150448301 -102808282 + (TG)n Simple_repeat Simple_repeat 1 28 0 627 244 105 0 chr2 150448301 150448401 -102808182 - Charlie8 DNA MER1_type -2289 128 1 357 267 17 33 chr2 150448401 150448521 -102808062 - MIR3 SINE MIR -54 154 37 2123 130 3 0 chr2 150449698 150450006 -102806577 - AluSx SINE Alu -3 309 1 22 0 0 0 chr2 150450649 150450671 -102805912 + AT_rich Low_complexity Low_complexity 1 22 0 203 245 38 0 chr2 150451545 150451598 -102804985 + A-rich Low_complexity Low_complexity 5 59 0 336 24 0 0 chr2 150452750 150452791 -102803792 + (TG)n Simple_repeat Simple_repeat 1 41 0 299 180 315 0 chr2 150453106 150453195 -102803388 - L1MB1 LINE L1 0 6168 6052 188 234 21 0 chr2 150454120 150454167 -102802416 + MIR SINE MIR 91 138 -124 458 257 273 0 chr2 150454238 150454425 -102802158 + MIR SINE MIR 13 250 -12 209 233 0 0 chr2 150454432 150454475 -102802108 + (TTA)n Simple_repeat Simple_repeat 2 44 0 306 330 227 5 chr2 150456504 150456689 -102799894 - MIR SINE MIR -17 245 20 207 0 0 0 chr2 150456783 150456806 -102799777 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 556 279 93 35 chr2 150457381 150457607 -102798976 - MIR SINE MIR -4 258 20 2654 33 0 3 chr2 150457957 150458264 -102798319 + AluY SINE Alu 1 306 -5 188 83 0 56 chr2 150459010 150459046 -102797537 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 502 291 0 26 chr2 150460760 150460911 -102795672 + MIR SINE MIR 108 254 -8 218 316 86 86 chr2 150461054 150461497 -102795086 + L2 LINE L2 2812 3254 -18 300 239 26 0 chr2 150461916 150462029 -102794554 + (TA)n Simple_repeat Simple_repeat 2 117 0 407 43 32 101 chr2 150462031 150462219 -102794364 + (TTATA)n Simple_repeat Simple_repeat 5 179 0 27 29 0 0 chr2 150462435 150462469 -102794114 + AT_rich Low_complexity Low_complexity 1 34 0 1838 125 0 14 chr2 150462469 150462758 -102793825 - AluSx SINE Alu -27 285 1 329 286 0 0 chr2 150465109 150465186 -102791397 + L2 LINE L2 3196 3272 0 633 299 67 59 chr2 150466353 150466749 -102789834 + L2 LINE L2 2298 2700 -614 3427 111 37 8 chr2 150466749 150467261 -102789322 + MER1A DNA MER1_type 1 527 0 633 299 67 59 chr2 150467261 150467325 -102789258 + L2 LINE L2 2700 2762 -552 22 0 0 0 chr2 150467610 150467632 -102788951 + AT_rich Low_complexity Low_complexity 1 22 0 1775 132 3 7 chr2 150467633 150467920 -102788663 - L1PB2 LINE L1 -1 6150 5865 571 350 179 16 chr2 150467946 150468332 -102788251 + L2 LINE L2 2824 3272 0 239 256 0 24 chr2 150468567 150468649 -102787934 - MIR SINE MIR -46 216 137 1955 124 25 0 chr2 150469226 150469606 -102786977 - AluSg SINE Alu 0 387 1 252 358 142 0 chr2 150470105 150470225 -102786358 - L2 LINE L2 0 3272 3136 1976 164 3 0 chr2 150471307 150471617 -102784966 - AluJb SINE Alu 0 312 2 2390 85 0 7 chr2 150471630 150471936 -102784647 - AluSg SINE Alu -5 305 2 372 272 109 27 chr2 150472138 150472285 -102784298 + MIR SINE MIR 34 192 -70 24 32 0 0 chr2 150473837 150473868 -102782715 + AT_rich Low_complexity Low_complexity 1 31 0 363 290 0 10 chr2 150473929 150474029 -102782554 - MER81 DNA DNA -1 113 15 228 222 0 0 chr2 150474888 150474933 -102781650 + (TG)n Simple_repeat Simple_repeat 2 46 0 444 291 8 0 chr2 150475488 150475615 -102780968 - MIR SINE MIR -3 259 132 26 0 0 0 chr2 150476010 150476036 -102780547 + AT_rich Low_complexity Low_complexity 1 26 0 3247 185 20 42 chr2 150476060 150476815 -102779768 - L1MB7 LINE L1 -2 6182 5445 2422 77 3 0 chr2 150476824 150477123 -102779460 - AluSp SINE Alu -13 300 1 461 308 108 14 chr2 150477400 150477614 -102778969 - MIR SINE MIR -6 256 23 347 355 86 14 chr2 150477689 150477909 -102778674 - MIR SINE MIR -8 254 19 339 25 0 0 chr2 150478156 150478196 -102778387 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 1650 136 0 0 chr2 150478215 150478450 -102778133 - AluSx SINE Alu -59 253 19 263 250 125 0 chr2 150479293 150479365 -102777218 - MIR3 SINE MIR -5 203 123 289 285 108 39 chr2 150479380 150479510 -102777073 + MIR3 SINE MIR 41 179 -29 801 192 7 7 chr2 150481966 150482117 -102774466 - AluJo SINE Alu -161 151 1 231 272 49 0 chr2 150482126 150482207 -102774376 - MIR SINE MIR -77 185 101 24 32 0 0 chr2 150482489 150482520 -102774063 + AT_rich Low_complexity Low_complexity 1 31 0 1575 121 140 4 chr2 150483680 150483803 -102772780 + AluSx SINE Alu 1 106 -196 252 0 0 0 chr2 150483803 150483831 -102772752 + (TAA)n Simple_repeat Simple_repeat 2 29 0 1575 121 140 4 chr2 150483831 150483972 -102772611 + AluSx SINE Alu 106 301 -1 748 292 98 9 chr2 150484072 150484397 -102772186 - L2 LINE L2 0 3313 2960 8511 165 23 4 chr2 150484397 150485796 -102770787 - ERVL LTR ERVL -1665 4099 2674 300 310 69 26 chr2 150485801 150485917 -102770666 - L2 LINE L2 -16 3256 3136 1270 181 58 15 chr2 150486009 150486384 -102770199 + AluJo SINE Alu 41 426 0 488 276 24 0 chr2 150486385 150486512 -102770071 + MER94 DNA DNA 5 134 0 371 339 0 0 chr2 150488726 150488841 -102767742 + L3b LINE CR1 1251 1365 -218 205 238 202 24 chr2 150488902 150488986 -102767597 + L2 LINE L2 3173 3271 -1 450 36 0 0 chr2 150489413 150489469 -102767114 + (TG)n Simple_repeat Simple_repeat 1 56 0 1651 165 9 56 chr2 150490361 150490557 -102766026 - AluJo SINE Alu -5 307 130 3704 95 12 2 chr2 150490557 150490915 -102765668 - L1PB1 LINE L1 -1 6150 5784 378 0 0 0 chr2 150490915 150490957 -102765626 + (TG)n Simple_repeat Simple_repeat 2 43 0 3704 95 12 2 chr2 150490957 150491116 -102765467 - L1PB1 LINE L1 -367 5784 5628 1651 165 9 56 chr2 150491116 150491241 -102765342 - AluJo SINE Alu -182 130 1 2101 110 13 10 chr2 150492202 150492510 -102764073 + AluY SINE Alu 1 309 -2 251 327 36 27 chr2 150492595 150492705 -102763878 + L2 LINE L2 3161 3271 -1 21 36 0 0 chr2 150493706 150493734 -102762849 + AT_rich Low_complexity Low_complexity 1 28 0 507 178 0 0 chr2 150493828 150493929 -102762654 + CT-rich Low_complexity Low_complexity 1 101 0 377 307 131 7 chr2 150493956 150494109 -102762474 + MIR SINE MIR 55 226 -36 382 319 38 13 chr2 150494149 150494306 -102762277 + MIR3 SINE MIR 47 207 -1 2471 69 3 0 chr2 150495919 150496223 -102760360 - AluSc SINE Alu -4 305 1 852 163 62 22 chr2 150496436 150496614 -102759969 - L1MB2 LINE L1 -7 6164 5980 2159 138 6 0 chr2 150498005 150498316 -102758267 - AluSq SINE Alu 0 313 1 41 0 0 0 chr2 150498418 150498459 -102758124 + AT_rich Low_complexity Low_complexity 1 41 0 338 332 119 10 chr2 150499040 150499233 -102757350 - MIR SINE MIR 0 262 49 986 24 32 0 chr2 150500562 150500685 -102755898 - L1PA4 LINE L1 -4 6151 6025 423 135 19 96 chr2 150503764 150503868 -102752715 - MER53 DNA DNA 0 189 94 233 262 131 41 chr2 150504900 150505022 -102751561 + LTR16C LTR ERVL 359 491 0 625 341 44 12 chr2 150505226 150505475 -102751108 - MIR SINE MIR -1 261 5 242 231 19 0 chr2 150505708 150505760 -102750823 + L2 LINE L2 3261 3313 0 210 172 30 40 chr2 150507268 150507367 -102749216 + (TTAAA)n Simple_repeat Simple_repeat 1 98 0 701 191 0 23 chr2 150507829 150507960 -102748623 + AluJb SINE Alu 137 264 -48 333 0 0 0 chr2 150507963 150508000 -102748583 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 275 350 117 21 chr2 150508147 150508387 -102748196 + L2 LINE L2 2494 2756 -558 562 326 68 78 chr2 150508528 150508746 -102747837 - L2 LINE L2 -3 3269 3050 2293 70 3 27 chr2 150508746 150509045 -102747538 - AluSc SINE Alu -17 292 1 562 326 68 78 chr2 150509045 150509346 -102747237 - L2 LINE L2 -222 3050 2750 1259 116 16 112 chr2 150509346 150509529 -102747054 + MER20 DNA MER1_type 1 157 -62 1897 163 7 0 chr2 150509529 150509829 -102746754 + AluJb SINE Alu 2 303 -9 1259 116 16 112 chr2 150509829 150509887 -102746696 + MER20 DNA MER1_type 157 219 0 562 326 68 78 chr2 150509887 150510078 -102746505 - L2 LINE L2 -522 2750 2559 245 161 143 0 chr2 150510797 150510853 -102745730 + MIR SINE MIR 74 137 -71 340 288 112 0 chr2 150511352 150511477 -102745106 + MIR3 SINE MIR 67 205 -3 456 19 0 0 chr2 150514989 150515042 -102741541 + (TG)n Simple_repeat Simple_repeat 2 54 0 250 173 19 0 chr2 150517303 150517355 -102739228 + (TG)n Simple_repeat Simple_repeat 2 54 0 223 333 0 0 chr2 150517966 150518026 -102738557 + MIR SINE MIR 200 259 -3 219 103 0 0 chr2 150519183 150519222 -102737361 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 260 253 63 21 chr2 150519294 150519389 -102737194 - L3b LINE CR1 -329 1254 1156 23 0 0 0 chr2 150519599 150519622 -102736961 + AT_rich Low_complexity Low_complexity 1 23 0 521 161 25 51 chr2 150520087 150520205 -102736378 - L2 LINE L2 -1 3312 3198 198 0 0 0 chr2 150520618 150520640 -102735943 + (T)n Simple_repeat Simple_repeat 1 22 0 409 303 29 87 chr2 150522685 150522962 -102733621 - MIR SINE MIR 0 262 2 2330 96 3 3 chr2 150523035 150523348 -102733235 - AluSq SINE Alu 0 313 1 2478 65 0 0 chr2 150523709 150524018 -102732565 + AluY SINE Alu 2 310 -1 244 317 40 0 chr2 150524213 150524314 -102732269 + L2 LINE L2 2380 2484 -830 242 301 229 26 chr2 150524336 150524602 -102731981 + L2 LINE L2 2638 2957 -357 396 281 16 91 chr2 150524738 150524980 -102731603 + L2 LINE L2 3089 3312 -1 216 97 0 0 chr2 150526459 150526490 -102730093 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 21 36 0 0 chr2 150526606 150526634 -102729949 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr2 150528240 150528269 -102728314 + AT_rich Low_complexity Low_complexity 1 29 0 227 339 0 0 chr2 150528482 150528547 -102728036 + tRNA-Ile-ATT tRNA tRNA 10 74 -3 366 218 128 45 chr2 150528727 150528860 -102727723 + MIR SINE MIR 70 213 -49 22 0 0 0 chr2 150530313 150530335 -102726248 + AT_rich Low_complexity Low_complexity 1 22 0 189 386 32 41 chr2 150532623 150532843 -102723740 + L2 LINE L2 578 795 -2519 224 304 146 52 chr2 150532966 150533275 -102723308 + L2 LINE L2 2347 2684 -630 239 171 0 0 chr2 150533384 150533425 -102723158 + L2 LINE L2 3273 3313 0 * 255 313 45 52 chr2 150533423 150533557 -102723026 - MIR SINE MIR -115 147 15 340 191 24 0 chr2 150533869 150533953 -102722630 + CT-rich Low_complexity Low_complexity 1 86 0 920 199 24 0 chr2 150533954 150534120 -102722463 - FAM SINE Alu -5 170 1 395 330 170 0 chr2 150534316 150534510 -102722073 + MIR SINE MIR 21 247 -15 2368 95 0 0 chr2 150535116 150535420 -102721163 + AluY SINE Alu 1 304 -7 270 136 0 0 chr2 150535803 150535847 -102720736 + (T)n Simple_repeat Simple_repeat 1 44 0 740 284 115 25 chr2 150537311 150537797 -102718786 - L1ME4a LINE L1 0 6121 5592 181 404 67 0 chr2 150538978 150539082 -102717501 + MIR SINE MIR 36 146 -116 27 0 0 0 chr2 150539282 150539309 -102717274 + AT_rich Low_complexity Low_complexity 1 27 0 319 245 218 53 chr2 150539402 150539590 -102716993 - L1ME3A LINE L1 -8 6162 5944 191 271 188 21 chr2 150539656 150539752 -102716831 + MIR3 SINE MIR 90 201 -7 227 200 22 0 chr2 150542012 150542057 -102714526 + GA-rich Low_complexity Low_complexity 2 47 0 214 369 0 0 chr2 150544685 150544750 -102711833 + polypyrimidine Low_complexity Low_complexity 1 65 0 334 339 57 0 chr2 150544753 150544877 -102711706 - L2 LINE L2 -1 3271 3141 1874 137 16 29 chr2 150545132 150545439 -102711144 - AluSx SINE Alu -7 305 3 309 333 88 21 chr2 150545781 150545973 -102710610 - L2 LINE L2 -507 2807 2603 402 338 22 58 chr2 150546802 150547027 -102709556 + MIR SINE MIR 13 229 -33 4050 128 16 24 chr2 150547314 150547951 -102708632 - L1MC1 LINE L1 -1 6332 5700 1612 125 3 125 chr2 150547951 150548286 -102708297 - AluJb SINE Alu -8 294 1 4050 128 16 24 chr2 150548286 150548358 -102708225 - L1MC1 LINE L1 -633 5700 5629 21 0 0 0 chr2 150550081 150550102 -102706481 + AT_rich Low_complexity Low_complexity 1 21 0 3388 83 4 0 chr2 150550402 150550858 -102705725 - L1PA10 LINE L1 -9 6159 5702 250 296 56 19 chr2 150550876 150550984 -102705599 - MIR SINE MIR -48 214 103 4042 92 7 2 chr2 150551093 150551666 -102704917 - L1PB2 LINE L1 0 6151 5576 520 235 188 7 chr2 150551864 150552013 -102704570 - MER5A DNA MER1_type -5 184 9 333 268 0 12 chr2 150552341 150552423 -102704160 - L2 LINE L2 -94 3219 3139 232 276 17 0 chr2 150553073 150553131 -102703452 + L2 LINE L2 3210 3268 -4 335 326 11 0 chr2 150554137 150554232 -102702351 - MIR3 SINE MIR -19 189 94 5995 114 4 0 chr2 150555222 150556764 -102699819 - L1PA13 LINE L1 -1 6162 4618 189 0 0 0 chr2 150558940 150558961 -102697622 + (TTTTG)n Simple_repeat Simple_repeat 1 21 0 488 303 179 9 chr2 150559385 150559603 -102696980 + MIR SINE MIR 8 262 0 520 243 12 35 chr2 150559901 150560070 -102696513 - L1ME4a LINE L1 -273 5848 5684 927 311 40 26 chr2 150560742 150561089 -102695494 - L2 LINE L2 -2 3311 2960 22 0 0 0 chr2 150561726 150561748 -102694835 + AT_rich Low_complexity Low_complexity 1 22 0 865 251 68 76 chr2 150561959 150562313 -102694270 - LTR40b LTR ERVL -88 374 24 198 357 29 0 chr2 150563133 150563203 -102693380 + MIR SINE MIR 45 116 -92 252 0 0 0 chr2 150564225 150564253 -102692330 + (TG)n Simple_repeat Simple_repeat 1 28 0 10430 125 36 19 chr2 150564573 150566682 -102689901 + Tigger1 DNA MER2_type 1 2230 -188 7099 56 18 0 chr2 150566691 150567996 -102688587 - L1PA7 LINE L1 -6 6148 4834 22817 128 13 86 chr2 150567997 150572581 -102684002 - L1PA7 LINE L1 -1885 4261 12 3069 223 19 22 chr2 150572656 150573354 -102683229 - L1ME1 LINE L1 -4 6162 5465 1913 128 7 11 chr2 150573354 150573636 -102682947 + AluSx SINE Alu 19 299 -13 3069 223 19 22 chr2 150573636 150573671 -102682912 - L1ME1 LINE L1 -701 5465 5431 861 231 5 24 chr2 150573698 150573910 -102682673 + Tigger1 DNA MER2_type 2211 2418 0 884 186 35 6 chr2 150573921 150574093 -102682490 - MER5A DNA MER1_type -5 184 8 * 1018 289 129 25 chr2 150574088 150574655 -102681928 - L2 LINE L2 -906 2408 1783 320 324 176 0 chr2 150574929 150575111 -102681472 - MIR SINE MIR -44 218 5 465 272 130 38 chr2 150575494 150575678 -102680905 - MIR SINE MIR 0 262 62 1985 145 14 7 chr2 150576663 150576959 -102679624 - AluJo SINE Alu -10 302 5 266 322 140 14 chr2 150577195 150577338 -102679245 - MLT1I LTR MaLR -203 206 46 241 358 118 30 chr2 150579488 150579818 -102676765 - L3 LINE CR1 -6 1571 1213 24 0 0 0 chr2 150580065 150580089 -102676494 + AT_rich Low_complexity Low_complexity 1 24 0 28 47 0 31 chr2 150580471 150580495 -102676088 + AT_rich Low_complexity Low_complexity 1 24 -38 1945 134 16 22 chr2 150580495 150580809 -102675774 + AluSx SINE Alu 1 312 0 28 47 0 31 chr2 150580809 150580848 -102675735 + AT_rich Low_complexity Low_complexity 24 62 0 1679 227 73 18 chr2 150580958 150581394 -102675189 + MLT1C LTR MaLR 1 460 -7 198 333 0 17 chr2 150581685 150581745 -102674838 + L2 LINE L2 3205 3263 -9 21 0 0 0 chr2 150583259 150583280 -102673303 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr2 150583345 150583374 -102673209 + AT_rich Low_complexity Low_complexity 1 29 0 1133 203 13 30 chr2 150588375 150588611 -102667972 + Tigger5 DNA MER2_type 1 232 -2091 * 1668 133 15 11 chr2 150588607 150588878 -102667705 + Tigger5 DNA MER2_type 2052 2323 0 403 343 60 9 chr2 150588898 150589114 -102667469 - Charlie8 DNA MER1_type -2141 276 50 210 91 0 0 chr2 150589228 150589261 -102667322 + (CAAAAA)n Simple_repeat Simple_repeat 3 35 0 481 288 29 35 chr2 150589556 150589726 -102666857 + MIR SINE MIR 20 188 -74 2470 94 0 0 chr2 150590453 150590761 -102665822 - AluSq SINE Alu -3 310 3 1196 181 26 0 chr2 150592662 150592888 -102663695 + MER46A DNA MER2_type 5 236 0 467 275 80 0 chr2 150592935 150593073 -102663510 - MIR SINE MIR -89 173 25 196 253 48 48 chr2 150593655 150593738 -102662845 + MIR SINE MIR 24 106 -156 300 293 64 64 chr2 150594342 150594530 -102662053 + MIR3 SINE MIR 14 201 -7 928 251 42 37 chr2 150595029 150595460 -102661123 - L1MC5 LINE L1 -32 7929 7497 519 45 0 0 chr2 150595460 150595526 -102661057 + (TTTC)n Simple_repeat Simple_repeat 3 68 0 901 204 103 52 chr2 150595544 150595892 -102660691 - L1MC5 LINE L1 -518 7443 7078 361 180 100 50 chr2 150596215 150596315 -102660268 + MIR SINE MIR 93 197 -65 243 292 146 0 chr2 150597214 150597310 -102659273 + L2 LINE L2 3186 3295 -18 1818 149 3 7 chr2 150597329 150597641 -102658942 + AluJo SINE Alu 1 311 0 2060 132 0 0 chr2 150600913 150601202 -102655381 - AluSx SINE Alu -23 289 1 953 215 178 49 chr2 150603653 150604058 -102652525 + LTR16A1 LTR ERVL 1 457 0 22 0 0 0 chr2 150604058 150604080 -102652503 + AT_rich Low_complexity Low_complexity 1 22 0 238 310 26 52 chr2 150604422 150604538 -102652045 - MIR SINE MIR -103 159 47 2007 275 36 26 chr2 150604712 150605293 -102651290 - MLT1E LTR MaLR 0 593 7 202 356 14 14 chr2 150605435 150605581 -102651002 + CT-rich Low_complexity Low_complexity 1 146 0 231 36 0 0 chr2 150606067 150606095 -102650488 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 269 333 11 0 chr2 150607929 150608022 -102648561 + CT-rich Low_complexity Low_complexity 1 94 0 26 30 0 0 chr2 150608040 150608073 -102648510 + AT_rich Low_complexity Low_complexity 1 33 0 258 239 15 15 chr2 150608560 150608627 -102647956 + MIR SINE MIR 156 222 -40 223 250 0 0 chr2 150608649 150608693 -102647890 + polypyrimidine Low_complexity Low_complexity 2 45 0 486 219 187 0 chr2 150608699 150608822 -102647761 - MER5A DNA MER1_type 0 189 44 22 35 0 0 chr2 150610581 150610610 -102645973 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 150612775 150612796 -102643787 + AT_rich Low_complexity Low_complexity 1 21 0 304 346 39 15 chr2 150614639 150614769 -102641814 + L2 LINE L2 3134 3266 -6 305 274 68 34 chr2 150614921 150615038 -102641545 - MIR SINE MIR -66 142 22 267 293 30 40 chr2 150615363 150615462 -102641121 + MIR SINE MIR 15 112 -150 490 345 38 30 chr2 150617489 150617724 -102638859 + MIR SINE MIR 8 244 -18 246 32 0 0 chr2 150618644 150618675 -102637908 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 203 355 0 0 chr2 150618749 150618811 -102637772 + L2 LINE L2 3210 3271 -1 1595 157 24 87 chr2 150619030 150619162 -102637421 + AluJb SINE Alu 2 141 -171 1835 108 0 4 chr2 150619162 150619412 -102637171 + AluSg SINE Alu 30 278 -32 1595 157 24 87 chr2 150619412 150619611 -102636972 + AluJb SINE Alu 141 312 0 455 311 30 7 chr2 150620028 150620163 -102636420 - MIR3 SINE MIR -45 163 26 416 281 158 12 chr2 150620674 150620845 -102635738 + MIR SINE MIR 20 215 -47 2392 85 10 0 chr2 150622963 150623270 -102633313 + AluSg SINE Alu 1 310 0 289 316 51 8 chr2 150623449 150623566 -102633017 - MLT1I LTR MaLR -255 154 33 429 319 19 25 chr2 150623795 150623955 -102632628 + MIR SINE MIR 1 159 -103 432 270 33 53 chr2 150623966 150624118 -102632465 + L2 LINE L2 3165 3313 0 307 266 32 11 chr2 150624123 150624217 -102632366 + MIR SINE MIR 165 260 -2 201 235 20 0 chr2 150624608 150624659 -102631924 - L2 LINE L2 0 3313 3262 531 250 184 61 chr2 150627062 150627486 -102629097 - L1ME4a LINE L1 -48 6073 5598 355 313 85 20 chr2 150629212 150629413 -102627170 - MLT1I LTR MaLR -189 220 7 311 347 19 32 chr2 150629481 150629697 -102626886 - HAL1b LINE L1 -13 1335 1123 213 39 0 0 chr2 150629851 150629877 -102626706 + (ATG)n Simple_repeat Simple_repeat 1 26 0 711 253 5 31 chr2 150629930 150630124 -102626459 - MIR SINE MIR -21 241 53 372 98 0 0 chr2 150630191 150630242 -102626341 - L1PA16 LINE L1 -9 6157 6107 1143 170 0 0 chr2 150630243 150630437 -102626146 - L1PA16 LINE L1 -338 5828 5635 5054 126 4 12 chr2 150630441 150631219 -102625364 - L1PA16 LINE L1 -51 6115 5344 1304 267 106 51 chr2 150631367 150631876 -102624707 - Zaphod DNA AcHobo -3494 537 1 531 336 48 67 chr2 150631879 150632147 -102624436 - L2 LINE L2 -10 3262 3000 424 313 103 17 chr2 150632226 150632526 -102624057 - L2 LINE L2 -682 2632 2307 184 314 174 12 chr2 150632517 150632603 -102623980 + L2 LINE L2 3205 3304 -9 * 1741 268 56 64 chr2 150633156 150634103 -102622480 - L2 LINE L2 0 3313 2387 303 364 30 15 chr2 150634455 150634587 -102621996 - L2 LINE L2 0 3272 3139 399 332 42 25 chr2 150636204 150636442 -102620141 - MIR SINE MIR -1 261 20 724 291 131 19 chr2 150636658 150637078 -102619505 + MARNA DNA Mariner 40 506 -80 198 103 0 0 chr2 150637195 150637224 -102619359 + (TG)n Simple_repeat Simple_repeat 1 29 0 258 32 0 0 chr2 150637292 150637323 -102619260 + (A)n Simple_repeat Simple_repeat 1 31 0 2429 93 0 0 chr2 150640481 150640781 -102615802 + AluSg SINE Alu 1 300 -10 22 0 0 0 chr2 150641437 150641459 -102615124 + AT_rich Low_complexity Low_complexity 1 22 0 210 209 23 0 chr2 150643496 150643539 -102613044 - MIR SINE MIR -67 141 98 21 0 0 0 chr2 150646381 150646402 -102610181 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 150648387 150648412 -102608171 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr2 150648699 150648728 -102607855 + AT_rich Low_complexity Low_complexity 1 29 0 330 361 146 14 chr2 150648755 150648968 -102607615 - L2 LINE L2 -2 3270 3030 615 275 52 18 chr2 150648988 150649217 -102607366 + L2 LINE L2 2452 2688 -626 570 343 158 8 chr2 150649227 150649784 -102606799 + L2 LINE L2 2564 3220 -93 645 240 53 101 chr2 150649784 150649833 -102606750 - MLT2C1 LTR ERVL 0 397 347 492 18 0 0 chr2 150649833 150649890 -102606693 + (TATG)n Simple_repeat Simple_repeat 4 60 0 383 0 21 0 chr2 150649891 150649938 -102606645 + (TCTA)n Simple_repeat Simple_repeat 1 48 0 645 240 53 101 chr2 150649938 150650303 -102606280 - MLT2C1 LTR ERVL -49 348 1 512 270 27 20 chr2 150650331 150650479 -102606104 + L1MCc LINE L1 341 489 -5934 2629 268 49 44 chr2 150650708 150652886 -102603697 + L1MCc LINE L1 656 3189 -3933 221 56 0 28 chr2 150652927 150652963 -102603620 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 11911 27 7 0 chr2 150652963 150655117 -102601466 - L1PA3 LINE L1 -24 6131 3971 13706 36 0 0 chr2 150655117 150656804 -102599779 + L1PA3 LINE L1 2283 3969 -2177 5687 262 63 21 chr2 150656795 150657951 -102598632 + L1MCc LINE L1 3142 4248 -2693 * 2437 113 11 17 chr2 150657951 150658313 -102598270 - THE1B LTR MaLR 0 364 5 5687 262 63 21 chr2 150658313 150659414 -102597169 + L1MCc LINE L1 4248 5493 -1448 759 215 128 0 chr2 150659417 150659659 -102596924 + L1ME1 LINE L1 3726 3998 -2943 473 271 7 0 chr2 150659652 150659792 -102596791 + L1ME1 LINE L1 5500 5640 -1301 * 372 155 0 0 chr2 150659792 150659863 -102596720 + (TA)n Simple_repeat Simple_repeat 1 71 0 183 42 0 0 chr2 150659862 150659886 -102596697 + (CA)n Simple_repeat Simple_repeat 2 25 0 * 712 255 75 17 chr2 150659886 150660125 -102596458 + L1ME1 LINE L1 5627 5879 -1062 199 91 23 23 chr2 150660137 150660181 -102596402 + (TA)n Simple_repeat Simple_repeat 1 44 0 544 143 163 10 chr2 150660181 150660279 -102596304 - FLAM_C SINE Alu -30 113 1 2893 225 24 43 chr2 150660446 150661358 -102595225 + L1ME1 LINE L1 5981 6880 -81 296 312 73 9 chr2 150662253 150662362 -102594221 - MIR SINE MIR -50 212 97 4006 128 8 11 chr2 150662712 150663339 -102593244 - L1PA16 LINE L1 -9 6157 5533 29 0 0 0 chr2 150665156 150665185 -102591398 + AT_rich Low_complexity Low_complexity 1 29 0 206 324 0 0 chr2 150667690 150667761 -102588822 + (CAT)n Simple_repeat Simple_repeat 2 72 0 243 0 0 0 chr2 150667864 150667891 -102588692 + (TTAA)n Simple_repeat Simple_repeat 4 30 0 1237 325 154 20 chr2 150667927 150668386 -102588197 - L2 LINE L2 -64 3249 2853 225 94 0 0 chr2 150668386 150668418 -102588165 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 1237 325 154 20 chr2 150668418 150669166 -102587417 - L2 LINE L2 -460 2853 1875 327 306 96 13 chr2 150671617 150671774 -102584809 - MIR SINE MIR -33 229 60 864 337 27 16 chr2 150672245 150672690 -102583893 + ERVL LTR ERVL 1413 1862 -3902 470 348 93 18 chr2 150672798 150672871 -102583712 + ERVL LTR ERVL 4701 4767 -718 324 0 0 0 chr2 150672871 150672907 -102583676 + (TC)n Simple_repeat Simple_repeat 1 36 0 470 348 93 18 chr2 150672907 150673342 -102583241 + ERVL LTR ERVL 4767 5251 -234 3275 79 2 19 chr2 150673423 150673445 -102583138 - L1PA10 LINE L1 -2 6166 6145 180 0 0 0 chr2 150673445 150673465 -102583118 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 3275 79 2 19 chr2 150673465 150673910 -102582673 - L1PA10 LINE L1 -23 6145 5707 21 0 0 0 chr2 150673917 150673938 -102582645 + AT_rich Low_complexity Low_complexity 1 21 0 623 277 127 23 chr2 150674136 150674356 -102582227 + LTR33 LTR ERVL 7 249 -272 282 202 143 12 chr2 150674476 150674560 -102582023 + LTR33 LTR ERVL 392 486 -35 2282 85 0 0 chr2 150674665 150674969 -102581614 - AluY SINE Alu 0 304 1 2193 204 66 13 chr2 150674987 150675457 -102581126 + MLT1D LTR MaLR 1 495 -10 2337 94 0 7 chr2 150675719 150676027 -102580556 + AluY SINE Alu 1 306 -5 30 27 0 0 chr2 150676100 150676137 -102580446 + AT_rich Low_complexity Low_complexity 1 37 0 2474 67 0 0 chr2 150677087 150677384 -102579199 - AluY SINE Alu -1 310 14 5787 97 30 7 chr2 150677543 150678411 -102578172 - L1MA3 LINE L1 -1 6304 5417 3799 145 37 63 chr2 150678766 150679572 -102577011 + LTR1 LTR ERV1 1 785 0 232 175 22 58 chr2 150679653 150679790 -102576793 + CT-rich Low_complexity Low_complexity 2 133 0 1808 176 3 0 chr2 150679800 150680101 -102576482 - AluJb SINE Alu -10 302 1 419 208 7 28 chr2 150680120 150680264 -102576319 + CT-rich Low_complexity Low_complexity 2 142 0 6436 112 42 19 chr2 150680626 150681673 -102574910 + MER11C LTR ERVK 1 1071 0 1448 229 79 98 chr2 150682072 150683031 -102573552 + L1ME1 LINE L1 762 1709 -4697 * 4145 256 76 24 chr2 150683018 150685075 -102571508 + L1ME1 LINE L1 2190 4308 -2098 611 253 31 63 chr2 150685074 150685831 -102570752 + L1ME1 LINE L1 5700 6408 -18 * 237 145 32 48 chr2 150686039 150686101 -102570482 + L1M1 LINE L1 5781 5841 -461 21 0 0 0 chr2 150687953 150687974 -102568609 + AT_rich Low_complexity Low_complexity 1 21 0 3477 241 41 8 chr2 150691169 150692304 -102564279 - L1PA8 LINE L1 -8 6164 4986 568 341 66 79 chr2 150693083 150693614 -102562969 + L2 LINE L2 2454 2977 -337 184 299 15 45 chr2 150693631 150693698 -102562885 - L2 LINE L2 -20 3252 3188 5615 205 23 8 chr2 150694194 150695459 -102561124 + L1 LINE L1 3850 5133 -1013 673 93 0 0 chr2 150695470 150695556 -102561027 + L1P LINE L1 11 96 -6050 1025 63 0 0 chr2 150695556 150695683 -102560900 + L1P LINE L1 623 749 -5397 1291 208 18 103 chr2 150696163 150696562 -102560021 + MLT1A1 LTR MaLR 1 365 0 23 54 0 0 chr2 150696677 150696714 -102559869 + AT_rich Low_complexity Low_complexity 1 37 0 622 200 21 7 chr2 150699349 150699489 -102557094 - MER5B DNA MER1_type -12 166 25 264 319 106 0 chr2 150700073 150700186 -102556397 + L2 LINE L2 3148 3272 0 204 141 24 94 chr2 150700940 150701025 -102555558 + T-rich Low_complexity Low_complexity 3 81 0 654 265 150 12 chr2 150701270 150701610 -102554973 + LTR33 LTR ERVL 109 495 -26 465 19 0 0 chr2 150707315 150707369 -102549214 + (CA)n Simple_repeat Simple_repeat 2 55 0 566 305 23 18 chr2 150711515 150711715 -102544868 - MIR SINE MIR -61 147 2 183 244 73 49 chr2 150711907 150711989 -102544594 - L2 LINE L2 -83 3230 3147 206 401 23 0 chr2 150715448 150715580 -102541003 + MIR SINE MIR 126 260 -2 364 328 119 8 chr2 150715973 150716107 -102540476 - MIR3 SINE MIR -33 175 27 6558 111 9 7 chr2 150717400 150718367 -102538216 - Tigger1 DNA MER2_type -1 2417 1449 32004 112 17 61 chr2 150718380 150724154 -102532429 + L1MC/D LINE L1 13 5546 -711 5772 136 55 6 chr2 150724157 150725145 -102531438 - Tigger1 DNA MER2_type -1382 1036 1 533 302 47 12 chr2 150725159 150725331 -102531252 - MIR SINE MIR -73 189 12 654 282 53 56 chr2 150726056 150726396 -102530187 + MLT1I LTR MaLR 71 409 0 319 318 15 61 chr2 150727342 150727540 -102529043 + MIR SINE MIR 31 213 -49 413 316 43 0 chr2 150727804 150727921 -102528662 + L2 LINE L2 3136 3257 -15 21 0 0 0 chr2 150728367 150728388 -102528195 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 150729293 150729322 -102527261 + AT_rich Low_complexity Low_complexity 1 29 0 201 371 57 0 chr2 150732893 150732963 -102523620 - L2 LINE L2 -50 3222 3149 520 247 40 7 chr2 150732970 150733120 -102523463 + MER5A DNA MER1_type 3 157 -32 217 236 31 126 chr2 150733528 150733655 -102522928 + MIR3 SINE MIR 89 203 -5 286 352 106 25 chr2 150734411 150734610 -102521973 + MIR SINE MIR 37 251 -11 183 304 80 32 chr2 150734649 150734774 -102521809 + L2 LINE L2 2297 2427 -887 300 353 40 33 chr2 150734867 150735017 -102521566 + L2 LINE L2 2602 2752 -562 246 167 42 21 chr2 150735170 150735218 -102521365 - LTR16A1 LTR ERVL 0 457 409 222 350 60 30 chr2 150735985 150736185 -102520398 + L2 LINE L2 2690 2895 -419 23 54 0 0 chr2 150737291 150737328 -102519255 + AT_rich Low_complexity Low_complexity 1 37 0 226 270 27 54 chr2 150738320 150738394 -102518189 + L2 LINE L2 3200 3271 -1 301 342 84 13 chr2 150738954 150739109 -102517474 - L2 LINE L2 -91 3181 3016 304 399 20 26 chr2 150739663 150739816 -102516767 - L2 LINE L2 -4 3268 3117 375 23 0 0 chr2 150739893 150739937 -102516646 + (TG)n Simple_repeat Simple_repeat 2 45 0 350 319 32 0 chr2 150740138 150740232 -102516351 - L2 LINE L2 -16 3297 3201 434 246 42 81 chr2 150740800 150741036 -102515547 - L1MC5 LINE L1 -18 7943 7717 1790 142 13 16 chr2 150741049 150741358 -102515225 - AluJo SINE Alu -4 308 1 601 252 19 67 chr2 150741465 150741752 -102514831 - L1MC4 LINE L1 -754 7207 6979 345 310 18 9 chr2 150742227 150742340 -102514243 - MER81 DNA DNA 0 114 1 28 29 0 0 chr2 150742811 150742846 -102513737 + AT_rich Low_complexity Low_complexity 1 35 0 188 305 86 53 chr2 150743582 150743733 -102512850 + MIR SINE MIR 107 262 0 368 285 93 52 chr2 150749178 150749408 -102507175 - MIR SINE MIR -6 256 7 261 53 0 80 chr2 150749408 150749483 -102507100 + (TCTCC)n Simple_repeat Simple_repeat 3 71 0 1770 161 75 30 chr2 150750263 150750636 -102505947 - MLT1B LTR MaLR 0 390 1 3516 59 0 0 chr2 150751419 150751863 -102504720 + L1PA8 LINE L1 5728 6171 -1 2584 248 78 38 chr2 150752116 150754107 -102502476 + L1MB8 LINE L1 3 2163 -4796 1344 109 16 0 chr2 150754107 150754290 -102502293 - AluSq SINE Alu -127 186 1 1479 113 4 0 chr2 150754291 150754520 -102502063 - L1 LINE L1 -1349 4797 4568 5316 143 20 30 chr2 150754520 150755472 -102501111 + L1MA4 LINE L1 5353 6294 -6 6736 231 56 10 chr2 150755507 150758622 -102497961 + L1MB8 LINE L1 3661 6973 -16 1000 243 56 26 chr2 150759553 150759857 -102496726 + MLT1J1 LTR MaLR 2 314 -132 289 364 129 20 chr2 150761879 150762173 -102494410 + L3 LINE CR1 1168 1493 -84 605 350 38 4 chr2 150762212 150762452 -102494131 + MIR SINE MIR 3 250 -12 317 343 20 20 chr2 150764966 150765112 -102491471 - MLT1K LTR MaLR -432 156 11 285 336 86 31 chr2 150765346 150765474 -102491109 + L2 LINE L2 3116 3250 -22 205 317 73 12 chr2 150765964 150766046 -102490537 - MER5A DNA MER1_type -30 159 73 180 138 0 0 chr2 150766030 150766059 -102490524 - MIR3 SINE MIR -28 180 152 * 732 275 5 16 chr2 150766060 150766249 -102490334 + MER117 DNA MER1_type 4 190 -7 198 265 0 20 chr2 150766275 150766324 -102490259 - MIR SINE MIR -152 110 63 249 196 0 71 chr2 150766497 150766553 -102490030 - L2 LINE L2 -10 3303 3252 297 167 0 0 chr2 150768955 150769009 -102487574 + T-rich Low_complexity Low_complexity 1 54 0 246 81 0 0 chr2 150772712 150772749 -102483834 + (TG)n Simple_repeat Simple_repeat 2 38 0 323 268 71 27 chr2 150772873 150773056 -102483527 - L1ME LINE L1 -345 5776 5586 345 323 137 39 chr2 150773552 150774252 -102482331 - L1ME LINE L1 -1255 4891 4123 285 98 0 0 chr2 150774260 150774301 -102482282 + (TA)n Simple_repeat Simple_repeat 2 42 0 500 308 55 11 chr2 150774361 150774543 -102482040 - MIR SINE MIR -24 238 49 225 94 0 0 chr2 150777268 150777300 -102479283 + (A)n Simple_repeat Simple_repeat 1 32 0 323 303 66 46 chr2 150778610 150778728 -102477855 - MIR SINE MIR -77 185 62 2589 115 0 3 chr2 150778728 150779092 -102477491 - THE1B LTR MaLR 0 364 2 323 303 66 46 chr2 150779092 150779125 -102477458 - MIR SINE MIR -200 62 31 885 217 0 30 chr2 150779223 150779421 -102477162 - MER3 DNA MER1_type -16 193 2 1193 272 68 64 chr2 150779733 150780266 -102476317 + MLT1F LTR MaLR 6 540 -2 245 331 25 32 chr2 150780520 150780677 -102475906 - L2 LINE L2 -254 3018 2863 288 0 0 0 chr2 150780869 150780901 -102475682 + (CA)n Simple_repeat Simple_repeat 1 32 0 583 184 15 0 chr2 150781069 150781205 -102475378 + GA-rich Low_complexity Low_complexity 3 140 0 196 185 56 74 chr2 150781702 150781756 -102474827 + MIR SINE MIR 201 253 -9 187 154 103 0 chr2 150781723 150781762 -102474821 + L2 LINE L2 3263 3305 -8 * 461 201 205 5 chr2 150784096 150784229 -102472354 - MER5A DNA MER1_type -6 183 15 252 330 44 11 chr2 150785259 150785350 -102471233 + MER91C DNA MER1_type 36 129 -11 452 200 0 0 chr2 150786179 150786254 -102470329 + MER69 DNA AcHobo 1 75 -2451 549 199 14 64 chr2 150786287 150786428 -102470155 + MER69 DNA AcHobo 2389 2522 -4 2076 138 21 9 chr2 150786445 150786778 -102469805 + MER1B DNA MER1_type 1 337 0 1011 200 15 15 chr2 150788436 150788636 -102467947 + MER20 DNA MER1_type 15 214 -5 2278 75 0 0 chr2 150789140 150789457 -102467126 - AluY SINE Alu 0 317 1 27 0 0 0 chr2 150789835 150789862 -102466721 + AT_rich Low_complexity Low_complexity 1 27 0 1527 191 49 0 chr2 150793914 150794202 -102462381 - AluJo SINE Alu -10 302 1 208 300 44 44 chr2 150794326 150794416 -102462167 + L2 LINE L2 3183 3272 0 2304 98 0 0 chr2 150794797 150795102 -102461481 - AluSg SINE Alu -5 305 1 1591 127 5 5 chr2 150795255 150795475 -102461108 + AluSq SINE Alu 1 220 -93 596 335 8 21 chr2 150796905 150797141 -102459442 + MIR SINE MIR 30 262 0 196 217 67 50 chr2 150797745 150797805 -102458778 - MIR3 SINE MIR -28 180 120 3370 175 6 28 chr2 150798029 150798704 -102457879 + L1MB8 LINE L1 5514 6173 -5 243 274 43 8 chr2 150799108 150799225 -102457358 + (TATATG)n Simple_repeat Simple_repeat 3 123 0 342 0 0 0 chr2 150799813 150799851 -102456732 + (CA)n Simple_repeat Simple_repeat 1 38 0 2028 111 0 42 chr2 150800597 150800903 -102455680 + AluSx SINE Alu 1 293 -19 293 350 24 32 chr2 150801269 150801392 -102455191 + L2 LINE L2 2959 3080 -192 243 354 150 0 chr2 150803106 150803219 -102453364 - L2 LINE L2 0 3272 3143 1619 234 9 3 chr2 150803907 150804240 -102452343 - MER58B DNA MER1_type -6 335 1 238 348 161 0 chr2 150805525 150805637 -102450946 + L2 LINE L2 3143 3272 0 349 352 93 17 chr2 150806561 150806797 -102449786 + MIR SINE MIR 5 258 -4 194 389 22 0 chr2 150806971 150807061 -102449522 + MER5A DNA MER1_type 61 152 -37 420 82 0 0 chr2 150808307 150808368 -102448215 + (TG)n Simple_repeat Simple_repeat 1 61 0 411 212 83 38 chr2 150810709 150810841 -102445742 + MIR SINE MIR 119 256 -6 233 206 65 93 chr2 150811025 150811132 -102445451 - L2 LINE L2 0 3272 3169 371 335 122 41 chr2 150811550 150811795 -102444788 + LTR33 LTR ERVL 2 266 -255 234 224 0 0 chr2 150811797 150811846 -102444737 + L2 LINE L2 3252 3300 -13 180 346 20 40 chr2 150813304 150813405 -102443178 + MIR SINE MIR 30 128 -80 180 291 0 18 chr2 150813410 150813465 -102443118 - L2 LINE L2 -31 3241 3188 2309 102 0 0 chr2 150813922 150814217 -102442366 + AluSg SINE Alu 1 295 -15 1078 198 50 119 chr2 150814507 150814926 -102441657 - MLT1B LTR MaLR 0 390 1 1742 201 33 8 chr2 150814973 150815341 -102441242 - MLT1B LTR MaLR -13 377 1 290 366 0 0 chr2 150815561 150815684 -102440899 + C-rich Low_complexity Low_complexity 1 123 0 779 211 64 34 chr2 150816418 150816622 -102439961 + MER63A DNA MER1_type 1 210 0 209 360 85 49 chr2 150817863 150818027 -102438556 - MIR3 SINE MIR -40 168 37 717 284 58 101 chr2 150818434 150819071 -102437512 - L1M4 LINE L1 -1134 5012 4403 309 250 81 41 chr2 150819283 150819455 -102437128 + L1MC4a LINE L1 5131 5309 -837 891 278 72 23 chr2 150819460 150820083 -102436500 + L1MC4a LINE L1 5327 6036 -1772 25 31 0 0 chr2 150821086 150821118 -102435465 + AT_rich Low_complexity Low_complexity 1 32 0 359 339 156 38 chr2 150821326 150821748 -102434835 + L2 LINE L2 2258 2729 -585 363 367 20 92 chr2 150821803 150822097 -102434486 + L2 LINE L2 3000 3272 0 231 61 0 0 chr2 150822369 150822402 -102434181 + (GA)n Simple_repeat Simple_repeat 2 34 0 28 29 0 0 chr2 150822820 150822855 -102433728 + AT_rich Low_complexity Low_complexity 1 35 0 1020 214 5 27 chr2 150823319 150823543 -102433040 - MER20 DNA MER1_type 0 219 1 999 272 84 26 chr2 150824675 150824984 -102431599 + MLT1I LTR MaLR 26 352 -57 1003 245 82 61 chr2 150825208 150825536 -102431047 - MER113 DNA MER1_type? 0 521 178 2046 139 0 0 chr2 150825536 150825838 -102430745 - AluSx SINE Alu -10 302 1 1003 245 82 61 chr2 150825838 150825987 -102430596 - MER113 DNA MER1_type? -343 178 34 257 278 222 0 chr2 150828208 150828298 -102428285 - L2 LINE L2 -9 3304 3195 276 77 0 0 chr2 150830481 150830520 -102426063 + (TG)n Simple_repeat Simple_repeat 2 40 0 24 53 0 0 chr2 150830966 150831004 -102425579 + AT_rich Low_complexity Low_complexity 1 38 0 41852 36 26 2 chr2 150831375 150837378 -102419205 - L1PA2 LINE L1 0 6155 9 783 260 55 97 chr2 150837429 150838000 -102418583 + L2 LINE L2 2759 3313 0 612 370 99 8 chr2 150838023 150838407 -102418176 - L3 LINE CR1 -400 1177 759 269 373 97 39 chr2 150838415 150838857 -102417726 - L2 LINE L2 -1 3271 2804 269 239 0 157 chr2 150839022 150839156 -102417427 + L3b LINE CR1 1241 1353 -230 225 373 82 0 chr2 150840280 150840390 -102416193 + L2 LINE L2 3193 3311 -2 38 51 0 0 chr2 150840775 150840834 -102415749 + AT_rich Low_complexity Low_complexity 1 59 0 258 106 0 0 chr2 150841029 150841076 -102415507 + (A)n Simple_repeat Simple_repeat 1 47 0 2025 96 33 0 chr2 150841332 150841628 -102414955 - AluY SINE Alu 0 305 1 23 33 0 0 chr2 150841774 150841804 -102414779 + AT_rich Low_complexity Low_complexity 1 30 0 2122 109 33 0 chr2 150842216 150842519 -102414064 + AluSq SINE Alu 1 313 0 2156 198 40 6 chr2 150842559 150843053 -102413530 - L1MA7 LINE L1 0 6291 5781 1807 160 12 6 chr2 150843056 150843375 -102413208 + L1MA7 LINE L1 5454 5774 -517 520 246 182 20 chr2 150843738 150843941 -102412642 + MIR SINE MIR 2 237 -25 241 224 75 75 chr2 150844767 150844874 -102411709 - L2 LINE L2 -1 3312 3206 4751 163 27 33 chr2 150845412 150847218 -102409365 - L1PB4 LINE L1 -8 6148 4364 383 345 103 6 chr2 150847245 150847410 -102409173 - MIR SINE MIR -64 198 18 212 273 0 0 chr2 150847635 150847679 -102408904 - L2 LINE L2 -1045 2269 2226 349 256 23 0 chr2 150847980 150848066 -102408517 + MIR SINE MIR 173 260 -2 300 70 0 0 chr2 150848759 150848802 -102407781 + (GA)n Simple_repeat Simple_repeat 2 44 0 390 75 149 0 chr2 150849450 150849517 -102407066 - MADE1 DNA Mariner -3 77 1 24 53 0 0 chr2 150850033 150850071 -102406512 + AT_rich Low_complexity Low_complexity 1 38 0 1708 132 64 0 chr2 150850071 150850382 -102406201 - L1MA6 LINE L1 -8 6292 5962 2978 256 127 48 chr2 150851375 150852070 -102404513 - HAL1 LINE L1 0 2507 1868 1894 162 0 3 chr2 150852070 150852367 -102404216 - AluJo SINE Alu -16 296 1 2978 256 127 48 chr2 150852367 150853436 -102403147 - HAL1 LINE L1 -639 1868 604 1964 131 24 0 chr2 150853909 150854199 -102402384 - AluSx SINE Alu -15 297 1 13596 148 50 4 chr2 150855974 150858264 -102398319 + Tigger1 DNA MER2_type 20 2414 -4 879 142 0 71 chr2 150858267 150858436 -102398147 + Tigger1 DNA MER2_type 1 157 -2261 * 975 172 74 5 chr2 150858425 150858628 -102397955 + Tigger1 DNA MER2_type 2202 2418 0 1124 251 98 52 chr2 150858630 150859037 -102397546 + MLT1F LTR MaLR 117 542 0 482 282 58 46 chr2 150859250 150859509 -102397074 - HAL1 LINE L1 -1203 1304 1043 3309 225 41 43 chr2 150861220 150862875 -102393708 - L1M4 LINE L1 -3810 2834 1177 2183 107 7 16 chr2 150862875 150863184 -102393399 - AluSg SINE Alu -2 308 3 2133 88 0 4 chr2 150863184 150863456 -102393127 - AluSg SINE Alu -37 273 1 3309 225 41 43 chr2 150863456 150863717 -102392866 - L1M4 LINE L1 -5465 1179 829 378 270 81 16 chr2 150863733 150863880 -102392703 - L1M4 LINE L1 -6219 427 2 2166 87 0 84 chr2 150863936 150863958 -102392625 - AluSq SINE Alu -6 307 285 210 118 0 0 chr2 150863958 150863992 -102392591 + (TCTA)n Simple_repeat Simple_repeat 1 34 0 2166 87 0 84 chr2 150863992 150864304 -102392279 - AluSq SINE Alu -28 285 1 34 55 0 0 chr2 150864931 150864986 -102391597 + AT_rich Low_complexity Low_complexity 1 55 0 3067 170 33 30 chr2 150865006 150865641 -102390942 - L1MA9 LINE L1 0 6312 5676 5231 124 57 8 chr2 150866342 150867199 -102389384 - L1MC1 LINE L1 -2 6331 5433 280 366 49 6 chr2 150868417 150868581 -102388002 + MIR3 SINE MIR 28 198 -10 594 316 52 5 chr2 150869666 150869878 -102386705 - MIR SINE MIR -1 261 40 22 0 0 0 chr2 150870006 150870028 -102386555 + AT_rich Low_complexity Low_complexity 1 22 0 783 58 19 0 chr2 150870028 150870131 -102386452 + L1PA10 LINE L1 6061 6165 -3 180 167 0 0 chr2 150870466 150870514 -102386069 + (CTAA)n Simple_repeat Simple_repeat 3 50 0 280 310 0 14 chr2 150870652 150870723 -102385860 - MIR SINE MIR -180 82 13 516 302 52 12 chr2 150874325 150874497 -102382086 - MIR SINE MIR -56 206 28 2132 129 47 16 chr2 150874838 150875202 -102381381 - THE1C LTR MaLR 0 375 1 309 109 0 0 chr2 150877253 150877308 -102379275 + (GA)n Simple_repeat Simple_repeat 1 55 0 22 35 0 0 chr2 150877583 150877612 -102378971 + AT_rich Low_complexity Low_complexity 1 29 0 27 29 0 0 chr2 150878119 150878153 -102378430 + AT_rich Low_complexity Low_complexity 1 34 0 2262 96 20 3 chr2 150878910 150879212 -102377371 - AluSg SINE Alu -3 307 1 349 289 79 32 chr2 150879296 150879486 -102377097 + L2 LINE L2 2817 3015 -257 248 263 40 13 chr2 150879509 150879585 -102376998 + MIR SINE MIR 114 191 -71 202 61 61 0 chr2 150880958 150880991 -102375592 + CT-rich Low_complexity Low_complexity 4 38 0 671 122 5 53 chr2 150880991 150881179 -102375404 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 1247 84 6 0 chr2 150881181 150881359 -102375224 + (TC)n Simple_repeat Simple_repeat 2 180 0 235 224 20 0 chr2 150882027 150882076 -102374507 + GA-rich Low_complexity Low_complexity 3 52 0 1948 75 40 0 chr2 150883566 150883819 -102372764 - AluY SINE Alu -12 299 37 23 0 0 0 chr2 150884118 150884141 -102372442 + AT_rich Low_complexity Low_complexity 1 23 0 2118 120 13 0 chr2 150884294 150884603 -102371980 - AluSp SINE Alu 0 313 1 2043 124 16 0 chr2 150884726 150885032 -102371551 - AluSq SINE Alu -2 311 1 1269 161 93 4 chr2 150885538 150885817 -102370766 - MER33 DNA MER1_type -16 308 5 216 246 87 14 chr2 150886105 150886174 -102370409 - L2 LINE L2 0 3272 3199 432 0 0 0 chr2 150886374 150886422 -102370161 + (CA)n Simple_repeat Simple_repeat 1 48 0 301 174 72 14 chr2 150886653 150886722 -102369861 + MIR SINE MIR 124 196 -66 * 325 267 12 0 chr2 150886718 150886804 -102369779 + MIR SINE MIR 18 104 -158 694 273 34 0 chr2 150886806 150887011 -102369572 + MIR SINE MIR 50 261 -1 623 231 35 6 chr2 150887219 150887392 -102369191 + MER5B DNA MER1_type 1 178 0 499 311 40 14 chr2 150887696 150887844 -102368739 - MER5A DNA MER1_type -2 187 36 254 371 38 38 chr2 150887701 150887860 -102368723 + MER5A DNA MER1_type 21 179 -10 * 343 295 58 40 chr2 150888136 150888309 -102368274 - MIR SINE MIR -75 187 12 21 36 0 0 chr2 150888453 150888481 -102368102 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr2 150890707 150890737 -102365846 + AT_rich Low_complexity Low_complexity 1 30 0 1179 199 7 7 chr2 150891105 150891391 -102365192 - AluSg SINE Alu -14 286 1 34 65 0 0 chr2 150892271 150892333 -102364250 + AT_rich Low_complexity Low_complexity 1 62 0 672 297 76 56 chr2 150892972 150893380 -102363203 - MLT1K LTR MaLR -68 520 105 656 297 68 37 chr2 150893493 150893874 -102362709 + MARNA DNA Mariner 145 537 -49 430 314 80 37 chr2 150893890 150894078 -102362505 + MIR SINE MIR 5 200 -62 21 0 0 0 chr2 150894101 150894122 -102362461 + AT_rich Low_complexity Low_complexity 1 21 0 840 286 102 35 chr2 150895742 150896116 -102360467 - MLT1I LTR MaLR -1 408 10 2437 129 8 0 chr2 150898220 150898592 -102357991 + THE1C LTR MaLR 1 375 0 8903 121 60 46 chr2 150898592 150900150 -102356433 + THE1C-int LTR MaLR 1 1580 0 2618 111 3 8 chr2 150900150 150900527 -102356056 + THE1C LTR MaLR 1 375 0 268 304 72 43 chr2 150900881 150901019 -102355564 + MIR3 SINE MIR 21 162 -46 1918 132 32 54 chr2 150902361 150902733 -102353850 - THE1B LTR MaLR 0 364 1 12010 89 2 2 chr2 150902733 150904313 -102352270 - THE1B-int LTR MaLR 0 1580 1 1975 119 43 57 chr2 150904313 150904682 -102351901 - THE1B LTR MaLR 0 364 1 254 173 19 19 chr2 150907140 150907192 -102349391 + MIR SINE MIR 109 160 -102 2567 117 5 11 chr2 150907988 150908365 -102348218 - THE1C LTR MaLR 0 375 1 426 299 47 8 chr2 150910706 150910833 -102345750 + MER5B DNA MER1_type 1 132 -46 1478 242 20 18 chr2 150911337 150911784 -102344799 - L1ME2 LINE L1 0 6164 5717 546 279 208 0 chr2 150911963 150912117 -102344466 - MER5A DNA MER1_type 0 189 4 26 0 0 0 chr2 150912405 150912431 -102344152 + AT_rich Low_complexity Low_complexity 1 26 0 25 0 0 0 chr2 150912501 150912526 -102344057 + AT_rich Low_complexity Low_complexity 1 25 0 317 260 0 62 chr2 150913018 150913164 -102343419 + HAL1 LINE L1 1270 1406 -1101 48 18 0 0 chr2 150913182 150913237 -102343346 + AT_rich Low_complexity Low_complexity 1 55 0 198 0 0 0 chr2 150913334 150913356 -102343227 + (A)n Simple_repeat Simple_repeat 1 22 0 21 43 0 0 chr2 150913362 150913385 -102343198 + GC_rich Low_complexity Low_complexity 1 23 0 515 155 0 0 chr2 150913419 150913503 -102343080 + AluSg/x SINE Alu 216 299 -10 1584 191 49 0 chr2 150914517 150914805 -102341778 - AluJo SINE Alu -10 302 1 205 300 44 44 chr2 150914929 150915019 -102341564 + L2 LINE L2 3183 3272 0 2208 98 7 3 chr2 150915400 150915705 -102340878 - AluSg SINE Alu -4 306 1 547 143 0 0 chr2 150915858 150915935 -102340648 + AluS SINE Alu 1 77 -235 959 267 112 44 chr2 150916421 150916964 -102339619 + MLT1E LTR MaLR 14 593 0 2153 119 3 0 chr2 150917239 150917533 -102339050 - AluSx SINE Alu -17 295 1 254 262 103 148 chr2 150917594 150917857 -102338726 + L2 LINE L2 2989 3239 -33 965 268 113 44 chr2 150918560 150919102 -102337481 + MLT1E LTR MaLR 15 593 0 1973 108 58 4 chr2 150919377 150919654 -102336929 - AluSc SINE Alu -17 292 1 246 59 0 0 chr2 150919671 150919705 -102336878 + L2 LINE L2 3276 3309 -4 334 311 92 15 chr2 150920214 150920410 -102336173 + MIR SINE MIR 46 256 -6 620 301 56 0 chr2 150920801 150921017 -102335566 + MIR SINE MIR 30 257 -5 207 0 0 0 chr2 150921665 150921688 -102334895 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 831 206 0 0 chr2 150921690 150921836 -102334747 - FRAM SINE Alu -30 146 1 592 261 64 30 chr2 150922028 150922262 -102334321 + LTR16B LTR ERVL 223 464 0 2159 109 0 3 chr2 150922641 150922926 -102333657 + AluSx SINE Alu 1 284 -28 324 70 0 0 chr2 150922926 150922969 -102333614 + (AATAG)n Simple_repeat Simple_repeat 3 45 0 346 280 20 20 chr2 150923043 150923143 -102333440 + MIR SINE MIR 45 144 -64 273 276 67 9 chr2 150924394 150924499 -102332084 - L3b LINE CR1 -154 1429 1319 1725 170 3 7 chr2 150924919 150925229 -102331354 - AluSx SINE Alu 0 309 1 256 384 67 34 chr2 150925421 150925847 -102330736 + L2 LINE L2 2613 3053 -219 21 0 0 0 chr2 150925909 150925930 -102330653 + AT_rich Low_complexity Low_complexity 1 21 0 23 68 0 0 chr2 150926071 150926115 -102330468 + AT_rich Low_complexity Low_complexity 1 44 0 3461 211 42 31 chr2 150926801 150927889 -102328694 - L1M4c LINE L1 -4521 2567 1562 303 287 35 52 chr2 150927890 150928005 -102328578 - L1M4c LINE L1 -5732 1437 1325 249 253 101 30 chr2 150928436 150928535 -102328048 - L1M4c LINE L1 -5816 1272 8 405 58 0 0 chr2 150930254 150930306 -102326277 + (TG)n Simple_repeat Simple_repeat 1 52 0 894 298 117 20 chr2 150930323 150930871 -102325712 + L2 LINE L2 2712 3313 0 180 200 0 0 chr2 150932352 150932397 -102324186 + (CAA)n Simple_repeat Simple_repeat 2 46 0 1866 143 76 25 chr2 150932598 150932955 -102323628 - THE1C LTR MaLR 0 375 1 187 359 0 0 chr2 150934703 150934756 -102321827 + L2 LINE L2 3204 3256 -16 2311 94 3 7 chr2 150934929 150935226 -102321357 + AluSg SINE Alu 1 296 -14 2451 87 0 0 chr2 150936450 150936761 -102319822 - AluY SINE Alu 0 311 1 23 0 0 0 chr2 150937978 150938001 -102318582 + AT_rich Low_complexity Low_complexity 1 23 0 238 377 50 25 chr2 150938230 150938429 -102318154 - L2 LINE L2 -624 2690 2487 223 242 0 32 chr2 150939844 150939906 -102316677 + L2 LINE L2 3213 3272 0 464 136 47 89 chr2 150942326 150942495 -102314088 + Charlie5 DNA MER1_type 2424 2585 -27 1008 278 85 16 chr2 150943160 150943705 -102312878 - L2 LINE L2 -189 3124 2536 1864 180 90 0 chr2 150943710 150943911 -102312672 + MER47B DNA MER2_type 7 189 -2134 2385 162 40 2 chr2 150943911 150944312 -102312271 - MER47B DNA MER2_type -1 417 2 1864 180 90 0 chr2 150944312 150944488 -102312095 + MER47B DNA MER2_type 189 418 0 308 323 32 16 chr2 150944502 150944626 -102311957 - L2 LINE L2 -792 2522 2397 335 274 77 36 chr2 150944634 150944908 -102311675 + L1MEc LINE L1 2023 2307 -4089 277 271 181 12 chr2 150944918 150945084 -102311499 - L2 LINE L2 -900 2414 2221 27 87 0 0 chr2 150945510 150945579 -102311004 + AT_rich Low_complexity Low_complexity 1 69 0 373 343 44 22 chr2 150945859 150946133 -102310450 - L3 LINE CR1 -727 850 571 267 279 105 0 chr2 150947173 150947259 -102309324 - L2 LINE L2 -4 3309 3215 499 325 25 12 chr2 150947371 150947534 -102309049 - MER5B DNA MER1_type -13 165 1 252 0 0 0 chr2 150947672 150947700 -102308883 + (T)n Simple_repeat Simple_repeat 1 28 0 210 71 0 0 chr2 150949306 150949334 -102307249 + (TG)n Simple_repeat Simple_repeat 1 28 0 313 276 41 0 chr2 150949512 150949610 -102306973 + L1ME4a LINE L1 5512 5613 -508 389 311 119 18 chr2 150949611 150949888 -102306695 + L1ME4a LINE L1 5639 5943 -178 238 104 21 21 chr2 150949969 150950017 -102306566 + (TAGA)n Simple_repeat Simple_repeat 3 50 0 2467 78 3 0 chr2 150950223 150950532 -102306051 + AluY SINE Alu 1 310 -1 240 355 27 18 chr2 150950551 150950661 -102305922 - MIR3 SINE MIR -39 169 59 483 311 34 46 chr2 150952003 150952241 -102304342 + MER102a DNA MER1_type 96 330 0 21 0 0 0 chr2 150952401 150952422 -102304161 + AT_rich Low_complexity Low_complexity 1 21 0 226 253 67 13 chr2 150952598 150952673 -102303910 + L2 LINE L2 3203 3281 -32 21 36 0 0 chr2 150953378 150953406 -102303177 + AT_rich Low_complexity Low_complexity 1 28 0 351 270 43 9 chr2 150954631 150954746 -102301837 - MIR SINE MIR -21 241 123 362 331 23 74 chr2 150954816 150955073 -102301510 + MIR SINE MIR 18 261 -1 21 36 0 0 chr2 150956475 150956503 -102300080 + AT_rich Low_complexity Low_complexity 1 28 0 204 280 20 0 chr2 150956636 150956686 -102299897 + MIR3 SINE MIR 110 160 -48 1131 144 0 0 chr2 150957688 150957861 -102298722 - AluSg/x SINE Alu -1 311 139 299 288 34 34 chr2 150959308 150959426 -102297157 - MIR3 SINE MIR -4 204 87 1379 95 0 0 chr2 150959444 150959623 -102296960 + AluSg/x SINE Alu 127 305 -5 270 333 38 9 chr2 150959794 150959899 -102296684 - L2 LINE L2 -1 3271 3164 671 255 87 5 chr2 150959927 150960123 -102296460 - MIR SINE MIR -49 213 2 523 316 74 0 chr2 150960658 150960848 -102295735 - MIR SINE MIR -6 256 53 2159 128 0 0 chr2 150960855 150961153 -102295430 + AluSc SINE Alu 1 298 -11 208 312 192 0 chr2 150961473 150961598 -102294985 - MIR SINE MIR -8 254 106 626 46 0 23 chr2 150961638 150961725 -102294858 + (TCTA)n Simple_repeat Simple_repeat 2 86 0 628 251 132 92 chr2 150961725 150962095 -102294488 + HsTC2 DNA Tc2 50 1590 -310 391 221 44 35 chr2 150962096 150962209 -102294374 + HsTC2 DNA Tc2 1781 1894 -4 25 31 0 0 chr2 150962398 150962430 -102294153 + AT_rich Low_complexity Low_complexity 1 32 0 492 252 141 51 chr2 150965020 150965254 -102291329 + MIR SINE MIR 8 262 0 435 19 0 0 chr2 150965580 150965620 -102290963 + (CA)n Simple_repeat Simple_repeat 1 92 0 435 19 0 0 chr2 150965620 150965672 -102290911 + (CA)n Simple_repeat Simple_repeat 1 52 0 4333 77 16 0 chr2 150965901 150966475 -102290108 - L1PA8A LINE L1 -3 6128 5546 1272 99 16 0 chr2 150967191 150967373 -102289210 - L1PB1 LINE L1 -1 6150 5966 302 208 0 42 chr2 150967373 150967445 -102289138 + HsTC2 DNA Tc2 19 87 -1811 298 289 82 50 chr2 150968488 150968647 -102287936 - MER5B DNA MER1_type 0 178 15 1174 214 77 57 chr2 150972995 150973449 -102283134 - Charlie1b DNA MER1_type 0 523 61 188 310 234 13 chr2 150974063 150974221 -102282362 - L2 LINE L2 0 3313 3121 335 348 112 48 chr2 150974492 150974929 -102281654 - L2 LINE L2 -525 2789 2325 312 70 0 0 chr2 150975085 150975128 -102281455 + (TG)n Simple_repeat Simple_repeat 2 44 0 2323 96 35 3 chr2 150975135 150975478 -102281105 - THE1A LTR MaLR 0 355 2 36 23 0 0 chr2 150975502 150975545 -102281038 + AT_rich Low_complexity Low_complexity 1 43 0 282 360 18 22 chr2 150975557 150975782 -102280801 - L2 LINE L2 -1035 2279 2056 261 320 31 82 chr2 150976372 150976566 -102280017 - L2 LINE L2 -1367 1947 1764 539 256 57 34 chr2 150980245 150980421 -102276162 + L2 LINE L2 3134 3313 0 309 68 0 0 chr2 150981209 150981253 -102275330 + (TG)n Simple_repeat Simple_repeat 1 44 0 37 0 0 0 chr2 150982307 150982344 -102274239 + AT_rich Low_complexity Low_complexity 1 37 0 1811 169 0 27 chr2 150982344 150982645 -102273938 - AluSx SINE Alu -19 293 1 613 312 122 62 chr2 150983300 150984112 -102272471 - L2 LINE L2 -497 2817 1957 200 116 0 70 chr2 150984180 150984223 -102272360 + (CAAAAA)n Simple_repeat Simple_repeat 6 45 0 347 200 67 56 chr2 150984434 150984524 -102272059 + L2 LINE L2 3172 3262 -10 187 375 0 0 chr2 150984642 150984730 -102271853 + MIR3 SINE MIR 116 203 -5 439 280 104 57 chr2 150985022 150985340 -102271243 + LTR16C LTR ERVL 156 488 -3 1807 138 109 53 chr2 150986857 150987006 -102269577 + MLT2C1 LTR ERVL 1 140 -257 2218 59 0 7 chr2 150987006 150987293 -102269290 + L1PA4 LINE L1 5871 6155 0 1807 138 109 53 chr2 150987293 150987519 -102269064 + MLT2C1 LTR ERVL 140 397 0 246 176 0 0 chr2 150987882 150987933 -102268650 + (CA)n Simple_repeat Simple_repeat 1 51 0 288 238 53 73 chr2 150988128 150988279 -102268304 + L2 LINE L2 2292 2439 -875 413 298 28 51 chr2 150988392 150988607 -102267976 - L2 LINE L2 0 3313 3104 693 24 0 0 chr2 150988902 150988985 -102267598 + (TTCC)n Simple_repeat Simple_repeat 1 83 0 214 160 40 20 chr2 150989233 150989283 -102267300 + A-rich Low_complexity Low_complexity 5 55 0 236 324 74 28 chr2 150989351 150989459 -102267124 - L2 LINE L2 -31 3241 3129 490 299 13 0 chr2 150989530 150989684 -102266899 + MIR SINE MIR 97 252 -10 21 0 0 0 chr2 150989690 150989711 -102266872 + AT_rich Low_complexity Low_complexity 1 21 0 1937 172 0 6 chr2 150990058 150990372 -102266211 + AluSx SINE Alu 1 312 0 283 330 215 11 chr2 150991479 150991670 -102264913 - L2 LINE L2 0 3313 3084 786 138 19 38 chr2 150991681 150991841 -102264742 - MER53 DNA DNA -3 186 30 398 301 35 35 chr2 150991878 150992051 -102264532 - L2 LINE L2 -216 3097 2925 25 51 0 0 chr2 150993638 150993677 -102262906 + AT_rich Low_complexity Low_complexity 1 39 0 563 270 76 49 chr2 150993699 150994188 -102262395 - L1ME4a LINE L1 -58 6063 5562 1563 246 64 41 chr2 150994423 150994955 -102261628 - MLT1H1 LTR MaLR -7 548 5 720 142 0 31 chr2 150995457 150995584 -102260999 - FLAM_A SINE Alu 0 142 20 31 44 0 0 chr2 150996202 150996247 -102260336 + AT_rich Low_complexity Low_complexity 1 45 0 418 311 96 24 chr2 150996738 150997072 -102259511 + L2 LINE L2 2954 3311 -2 27 0 0 0 chr2 150997713 150997740 -102258843 + AT_rich Low_complexity Low_complexity 1 27 0 1671 179 11 0 chr2 150997742 150998027 -102258556 + AluJo SINE Alu 1 288 -24 274 313 62 54 chr2 150998385 150998625 -102257958 + MIR SINE MIR 8 249 -13 774 317 42 52 chr2 150998703 150999208 -102257375 - L1M4 LINE L1 -2945 3201 2702 315 0 0 0 chr2 150999275 150999310 -102257273 + (TA)n Simple_repeat Simple_repeat 1 35 0 1536 228 3 10 chr2 151000069 151000381 -102256202 - AluJb SINE Alu 0 312 3 455 336 93 22 chr2 151003444 151003756 -102252827 + LTR16A LTR ERVL 11 344 -106 561 274 9 70 chr2 151004570 151004785 -102251798 - L2 LINE L2 -17 3296 3095 289 169 0 31 chr2 151004785 151004850 -102251733 - MLT2C2 LTR ERVL 0 464 407 343 147 13 13 chr2 151004853 151004928 -102251655 + (TGGA)n Simple_repeat Simple_repeat 4 78 0 2266 245 8 23 chr2 151004938 151005460 -102251123 - MLT2B3 LTR ERVL -39 515 2 810 193 14 0 chr2 151005460 151005605 -102250978 + AluJb SINE Alu 136 282 -30 518 307 86 1 chr2 151005653 151005987 -102250596 - L2 LINE L2 -243 3070 2707 911 272 32 58 chr2 151006087 151006433 -102250150 - L2 LINE L2 -594 2720 2384 226 148 37 0 chr2 151007385 151007439 -102249144 + (CAT)n Simple_repeat Simple_repeat 2 57 0 390 361 82 20 chr2 151011660 151011965 -102244618 + L2 LINE L2 2301 2624 -690 595 271 132 63 chr2 151011969 151012448 -102244135 - LTR33A LTR ERVL -3 520 9 210 211 48 19 chr2 151012814 151012918 -102243665 + (TTTG)n Simple_repeat Simple_repeat 1 107 0 490 309 61 0 chr2 151013209 151013390 -102243193 - ERVL LTR ERVL -435 5329 5138 1683 307 98 38 chr2 151013424 151014752 -102241831 - ERVL LTR ERVL -504 4981 3642 408 308 67 15 chr2 151015438 151015633 -102240950 - LTR67 LTR ERVL 0 557 353 489 274 152 14 chr2 151015789 151016066 -102240517 - L1ME4a LINE L1 -246 5875 5561 1537 189 3 26 chr2 151016322 151016629 -102239954 - AluJo SINE Alu -12 300 1 21 0 0 0 chr2 151017780 151017801 -102238782 + AT_rich Low_complexity Low_complexity 1 21 0 264 100 0 0 chr2 151019384 151019424 -102237159 + (TG)n Simple_repeat Simple_repeat 1 40 0 510 211 63 0 chr2 151019471 151019613 -102236970 + L1ME3A LINE L1 6020 6170 0 355 85 0 0 chr2 151019626 151019673 -102236910 - L1P5 LINE L1 -578 5576 5530 1293 338 73 29 chr2 151020232 151020296 -102236287 + L2 LINE L2 1990 2050 -1222 204 40 0 0 chr2 151020296 151020321 -102236262 + (TTTC)n Simple_repeat Simple_repeat 2 26 0 1293 338 73 29 chr2 151020321 151020665 -102235918 + L2 LINE L2 2050 2377 -895 1840 150 29 0 chr2 151020665 151020967 -102235616 - AluSx SINE Alu 0 310 1 1293 338 73 29 chr2 151020967 151021559 -102235024 + L2 LINE L2 2377 3057 -215 270 81 0 0 chr2 151022580 151022617 -102233966 + (T)n Simple_repeat Simple_repeat 1 37 0 519 123 0 0 chr2 151023294 151023375 -102233208 + (TTTTA)n Simple_repeat Simple_repeat 1 81 0 378 0 0 0 chr2 151023861 151023903 -102232680 + (CA)n Simple_repeat Simple_repeat 1 42 0 216 163 0 0 chr2 151024031 151024074 -102232509 + GA-rich Low_complexity Low_complexity 1 43 0 2154 128 0 0 chr2 151024293 151024599 -102231984 + AluSx SINE Alu 1 306 -6 29 0 0 0 chr2 151024909 151024938 -102231645 + AT_rich Low_complexity Low_complexity 1 29 0 2198 108 7 0 chr2 151025191 151025488 -102231095 + AluSx SINE Alu 1 299 -13 1646 169 40 0 chr2 151025761 151026034 -102230549 - AluJb SINE Alu -18 294 11 2061 167 13 10 chr2 151026126 151026516 -102230067 - L1MA5 LINE L1 -2 6298 5908 280 99 70 0 chr2 151026769 151026840 -102229743 + (TA)n Simple_repeat Simple_repeat 1 76 0 327 25 0 0 chr2 151027029 151027069 -102229514 + (CA)n Simple_repeat Simple_repeat 1 40 0 442 235 1 76 chr2 151027131 151027285 -102229298 - MER69A DNA AcHobo -1 176 33 236 250 0 0 chr2 151027417 151027481 -102229102 + CT-rich Low_complexity Low_complexity 1 64 0 1803 112 6 96 chr2 151029348 151029688 -102226895 - AluSq SINE Alu 0 312 1 996 293 84 22 chr2 151030859 151031517 -102225066 - L2 LINE L2 -17 3296 2599 21 0 0 0 chr2 151032624 151032645 -102223938 + AT_rich Low_complexity Low_complexity 1 21 0 1983 194 0 6 chr2 151032954 151033319 -102223264 + MLT1A1 LTR MaLR 2 364 -1 2893 191 18 50 chr2 151033333 151033987 -102222596 + MLT1A1-int LTR MaLR 2 634 -1101 330 292 0 0 chr2 151035827 151035916 -102220667 - L1MC4 LINE L1 -1339 6703 6615 2307 77 61 0 chr2 151035923 151036233 -102220350 - MLT2A2 LTR ERVL 0 453 125 5189 77 7 3 chr2 151036301 151036990 -102219593 - HERVL-A2 LTR ERVL -4962 692 1 396 133 145 0 chr2 151036990 151037029 -102219554 - MLT2A2 LTR ERVL 0 453 421 360 0 0 0 chr2 151037029 151037069 -102219514 + (CA)n Simple_repeat Simple_repeat 1 40 0 396 133 145 0 chr2 151037069 151037112 -102219471 - MLT2A2 LTR ERVL -32 421 359 * 919 42 0 8 chr2 151037107 151037226 -102219357 - MLT2A2 LTR ERVL -335 118 1 185 252 67 76 chr2 151037415 151037534 -102219049 - MIR SINE MIR -64 144 27 183 205 0 0 chr2 151038950 151038989 -102217594 + T-rich Low_complexity Low_complexity 1 39 0 914 184 40 0 chr2 151040429 151040603 -102215980 + MER20 DNA MER1_type 12 192 -27 995 227 17 37 chr2 151040603 151040903 -102215680 - L1M4 LINE L1 -2379 3767 3474 181 318 222 5 chr2 151042294 151042483 -102214100 + MIR SINE MIR 23 252 -10 439 248 34 117 chr2 151042816 151043022 -102213561 - MIR SINE MIR -72 190 2 6496 225 54 9 chr2 151043774 151045017 -102211566 + L1MB8 LINE L1 3474 4660 -1518 2264 173 64 15 chr2 151045017 151045421 -102211162 - MSTB LTR MaLR 0 426 3 6496 225 54 9 chr2 151045421 151046723 -102209860 + L1MB8 LINE L1 4660 6173 -5 264 296 42 17 chr2 151049504 151049593 -102206990 + MER5A DNA MER1_type 88 189 0 346 315 9 0 chr2 151050196 151050307 -102206276 - MER94 DNA DNA -13 121 10 279 79 0 0 chr2 151051295 151051333 -102205250 + (A)n Simple_repeat Simple_repeat 1 38 0 587 276 87 25 chr2 151052942 151053138 -102203445 + MIR SINE MIR 17 224 -38 313 314 145 12 chr2 151053184 151053356 -102203227 + L2 LINE L2 3119 3313 0 238 254 16 0 chr2 151053358 151053421 -102203162 + (TGGA)n Simple_repeat Simple_repeat 4 67 0 320 331 71 6 chr2 151054826 151054995 -102201588 - MIR SINE MIR -74 188 9 411 236 91 61 chr2 151055122 151055287 -102201296 + MIR3 SINE MIR 34 203 -5 205 252 84 84 chr2 151055722 151055853 -102200730 + MIR SINE MIR 67 197 -65 25 0 0 0 chr2 151055856 151055881 -102200702 + AT_rich Low_complexity Low_complexity 1 25 0 742 261 16 0 chr2 151056157 151056341 -102200242 + MER5A DNA MER1_type 3 189 0 462 88 0 0 chr2 151056725 151056793 -102199790 + (GA)n Simple_repeat Simple_repeat 1 68 0 306 0 0 0 chr2 151057930 151057964 -102198619 + (TG)n Simple_repeat Simple_repeat 2 35 0 2121 116 0 3 chr2 151059250 151059552 -102197031 - AluSc SINE Alu -8 301 1 265 276 55 39 chr2 151061099 151061226 -102195357 + L3 LINE CR1 1250 1378 -199 2767 91 0 3 chr2 151061244 151061619 -102194964 - THE1C LTR MaLR 0 375 2 839 335 83 38 chr2 151061950 151062457 -102194126 + MLT1K LTR MaLR 59 588 0 317 261 11 33 chr2 151063392 151063484 -102193099 + L1MC4 LINE L1 6614 6703 -1339 480 259 76 44 chr2 151064345 151064503 -102192080 - MER5A DNA MER1_type 0 189 27 23 54 0 0 chr2 151064975 151065012 -102191571 + AT_rich Low_complexity Low_complexity 1 37 0 1325 132 5 0 chr2 151067043 151067240 -102189343 + MLT2A2 LTR ERVL 1 198 -255 3986 217 70 28 chr2 151067241 151069383 -102187200 + L1MD1 LINE L1 4018 6237 -5 240 105 26 0 chr2 151070173 151070211 -102186372 + LTR33A LTR ERVL 136 174 -349 25 0 0 0 chr2 151070914 151070939 -102185644 + AT_rich Low_complexity Low_complexity 1 25 0 225 0 0 0 chr2 151075337 151075362 -102181221 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 667 271 65 65 chr2 151075862 151076260 -102180323 - L1MC5 LINE L1 -62 7899 7502 666 198 106 103 chr2 151076945 151077218 -102179365 - L1MD1 LINE L1 -5 6237 5964 472 217 45 18 chr2 151079056 151079218 -102177365 - MLT1H1 LTR MaLR 0 549 382 646 261 12 36 chr2 151079240 151079405 -102177178 - MLT1H1 LTR MaLR -363 192 32 247 236 109 45 chr2 151079497 151079607 -102176976 - MLT1H1-int LTR MaLR -40 1331 1215 284 229 98 57 chr2 151079846 151079968 -102176615 - MLT1H1 LTR MaLR -34 521 395 626 228 89 25 chr2 151079975 151080133 -102176450 + MER45 DNA AcHobo 1 168 -785 242 226 16 16 chr2 151080750 151080812 -102175771 + GA-rich Low_complexity Low_complexity 4 65 0 1984 180 71 33 chr2 151080936 151081386 -102175197 - MLT1C LTR MaLR 0 467 1 240 229 16 0 chr2 151081528 151081589 -102174994 + MLT2B1 LTR ERVL 419 480 -40 279 287 0 0 chr2 151081598 151081685 -102174898 - L1MC4 LINE L1 -1342 6700 6614 266 315 0 0 chr2 151081679 151081768 -102174815 - L1MC4 LINE L1 -1339 6703 6615 * 225 309 24 0 chr2 151081718 151081802 -102174781 + L1MC4 LINE L1 6615 6700 -1342 * 234 264 0 58 chr2 151081779 151081866 -102174717 + L1MC4 LINE L1 6614 6695 -1347 * 259 296 23 0 chr2 151081834 151081922 -102174661 - L1MC4 LINE L1 -1339 6703 6614 239 289 0 0 chr2 151081872 151081955 -102174628 + L1MC4 LINE L1 6614 6696 -1346 * 337 51 17 85 chr2 151081957 151082016 -102174567 + MLT2B1 LTR ERVL 464 518 -2 1032 83 143 0 chr2 151082362 151082530 -102174053 + L1PB1 LINE L1 5960 6151 0 372 305 111 62 chr2 151082888 151083114 -102173469 + MIR SINE MIR 20 256 -6 309 264 54 0 chr2 151083620 151083749 -102172834 - LTR33 LTR ERVL -48 473 338 720 120 48 0 chr2 151083854 151083979 -102172604 + L1PA13 LINE L1 6033 6163 0 25 0 0 0 chr2 151083993 151084018 -102172565 + AT_rich Low_complexity Low_complexity 1 25 0 2045 132 7 0 chr2 151084618 151084914 -102171669 + AluSc SINE Alu 1 298 -11 24 0 0 0 chr2 151085554 151085578 -102171005 + AT_rich Low_complexity Low_complexity 1 24 0 1845 212 35 16 chr2 151087085 151087515 -102169068 + L1MD3 LINE L1 7556 7993 -2 201 129 0 0 chr2 151088086 151088117 -102168466 + (CA)n Simple_repeat Simple_repeat 2 32 0 278 340 39 0 chr2 151088203 151088306 -102168277 - MIR SINE MIR -91 171 65 373 296 9 0 chr2 151091102 151091210 -102165373 - MER94 DNA DNA 0 134 26 462 65 0 0 chr2 151091558 151091620 -102164963 + (TATAA)n Simple_repeat Simple_repeat 3 64 0 456 231 218 7 chr2 151092391 151092538 -102164045 - MIR SINE MIR -59 203 26 430 197 8 32 chr2 151092637 151092742 -102163841 - MER5A DNA MER1_type -84 105 4 22 35 0 0 chr2 151093486 151093515 -102163068 + AT_rich Low_complexity Low_complexity 1 29 0 32 75 0 0 chr2 151093559 151093626 -102162957 + AT_rich Low_complexity Low_complexity 1 67 0 1846 236 31 20 chr2 151093842 151094397 -102162186 + L1MC1 LINE L1 4629 5189 -957 1248 208 45 11 chr2 151094397 151094662 -102161921 + AluJo SINE Alu 27 300 -12 5288 193 26 3 chr2 151094666 151095764 -102160819 + L1MC1 LINE L1 5193 6316 -17 23 0 0 0 chr2 151096264 151096287 -102160296 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 151096663 151096691 -102159892 + AT_rich Low_complexity Low_complexity 1 28 0 4781 242 53 28 chr2 151097571 151098425 -102158158 - L1ME1 LINE L1 -5 6230 5399 2201 121 0 3 chr2 151098425 151098738 -102157845 - AluSx SINE Alu 0 312 1 4781 242 53 28 chr2 151098738 151100511 -102156072 - L1ME1 LINE L1 -836 5399 3524 1714 269 78 25 chr2 151100532 151101562 -102155021 - L1ME1 LINE L1 -2967 3248 2273 9057 104 16 7 chr2 151101562 151102838 -102153745 + HSMAR1 DNA Mariner 1 1287 0 1714 269 78 25 chr2 151102838 151104442 -102152141 - L1ME1 LINE L1 -3942 2273 450 297 109 0 0 chr2 151105378 151105424 -102151159 + (T)n Simple_repeat Simple_repeat 1 46 0 282 332 79 25 chr2 151106114 151106316 -102150267 + L2 LINE L2 2871 3083 -189 1283 251 13 7 chr2 151110091 151110390 -102146193 - LTR16C LTR ERVL 0 491 191 24 32 0 0 chr2 151110675 151110706 -102145877 + AT_rich Low_complexity Low_complexity 1 31 0 504 297 129 10 chr2 151111152 151111361 -102145222 + MIR SINE MIR 28 261 -1 1456 303 107 61 chr2 151111676 151112233 -102144350 + L2 LINE L2 2105 2635 -678 2436 128 22 3 chr2 151112233 151112601 -102143982 - THE1C LTR MaLR 0 375 1 1456 303 107 61 chr2 151112601 151113162 -102143421 + L2 LINE L2 2635 3295 -18 315 310 145 16 chr2 151113431 151113648 -102142935 - MIR SINE MIR -10 252 5 327 246 42 84 chr2 151114524 151114666 -102141917 - MIR3 SINE MIR -6 202 67 243 67 0 0 chr2 151114666 151114696 -102141887 - L1P LINE L1 -899 5247 5218 320 73 0 0 chr2 151114696 151114759 -102141824 + L1PA3 LINE L1 6097 6159 0 505 293 61 29 chr2 151115839 151116085 -102140498 - MER112 DNA MER1_type -6 254 1 23 54 0 0 chr2 151117268 151117305 -102139278 + AT_rich Low_complexity Low_complexity 1 37 0 237 236 94 57 chr2 151117388 151117494 -102139089 + L3b LINE CR1 1353 1462 -121 577 259 0 0 chr2 151117767 151117879 -102138704 + MER5A DNA MER1_type 6 117 -72 319 226 17 87 chr2 151118143 151118258 -102138325 - L2 LINE L2 -4 3268 3162 905 291 108 33 chr2 151119579 151120060 -102136523 + L3 LINE CR1 803 1319 -258 182 284 122 61 chr2 151120157 151120305 -102136278 + MIR SINE MIR 81 237 -25 2183 108 3 0 chr2 151120670 151120967 -102135616 + AluY SINE Alu 2 299 -12 29 0 0 0 chr2 151120969 151120998 -102135585 + AT_rich Low_complexity Low_complexity 1 29 0 1750 128 31 56 chr2 151121577 151121897 -102134686 - AluJb SINE Alu 0 312 1 194 207 17 0 chr2 151123281 151123339 -102133244 + (TA)n Simple_repeat Simple_repeat 1 59 0 23 97 0 0 chr2 151123344 151123416 -102133167 + AT_rich Low_complexity Low_complexity 1 72 0 32 0 0 0 chr2 151123612 151123644 -102132939 + AT_rich Low_complexity Low_complexity 1 32 0 206 190 0 17 chr2 151123848 151123906 -102132677 + GA-rich Low_complexity Low_complexity 2 58 0 24 32 0 0 chr2 151124389 151124420 -102132163 + AT_rich Low_complexity Low_complexity 1 31 0 1433 56 6 0 chr2 151124420 151124598 -102131985 + AluY SINE Alu 124 302 -9 6226 144 15 16 chr2 151124598 151125129 -102131454 - L1MA3 LINE L1 -1 6304 5774 2034 118 0 40 chr2 151125129 151125450 -102131133 - AluY SINE Alu -3 308 1 6226 144 15 16 chr2 151125450 151126424 -102130159 - L1MA3 LINE L1 -531 5774 4799 198 71 0 0 chr2 151126608 151126636 -102129947 + (TC)n Simple_repeat Simple_repeat 2 29 0 303 289 11 11 chr2 151126636 151126726 -102129857 + L1MC4 LINE L1 6614 6703 -1339 1718 174 119 0 chr2 151126874 151127201 -102129382 + MER47A DNA MER2_type 1 366 0 519 302 146 0 chr2 151128074 151128266 -102128317 + MIR SINE MIR 9 228 -34 1727 155 10 79 chr2 151128294 151128687 -102127896 - MER47A DNA MER2_type 0 366 1 28 91 0 0 chr2 151128844 151128921 -102127662 + AT_rich Low_complexity Low_complexity 1 77 0 1592 181 4 11 chr2 151128986 151129262 -102127321 - AluJo SINE Alu -38 274 1 372 248 9 18 chr2 151129367 151129480 -102127103 - L1MB8 LINE L1 -1 6177 6066 449 228 7 44 chr2 151129572 151129708 -102126875 + MER114 LTR ERV 16 146 -502 309 60 20 0 chr2 151129868 151129918 -102126665 - Charlie5 DNA MER1_type -56 2556 2506 341 274 16 0 chr2 151130091 151130215 -102126368 + MER114 LTR ERV 441 566 -82 23 68 0 0 chr2 151130315 151130359 -102126224 + AT_rich Low_complexity Low_complexity 1 44 0 21 57 0 0 chr2 151130426 151130461 -102126122 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr2 151130518 151130540 -102126043 + AT_rich Low_complexity Low_complexity 1 22 0 215 95 0 48 chr2 151130727 151130769 -102125814 + (TTTTTA)n Simple_repeat Simple_repeat 2 41 0 185 347 0 0 chr2 151130972 151131021 -102125562 - L2 LINE L2 -214 3058 3010 258 136 0 0 chr2 151131306 151131350 -102125233 + (A)n Simple_repeat Simple_repeat 1 44 0 1352 169 9 91 chr2 151131517 151131837 -102124746 + AluJo SINE Alu 3 296 -16 256 245 54 44 chr2 151132463 151132601 -102123982 - MIR SINE MIR -71 137 16 273 39 59 0 chr2 151134015 151134066 -102122517 + A-rich Low_complexity Low_complexity 2 55 0 209 333 21 11 chr2 151135125 151135218 -102121365 + L3b LINE CR1 1380 1473 -110 21 0 0 0 chr2 151136156 151136177 -102120406 + AT_rich Low_complexity Low_complexity 1 21 0 2008 130 38 49 chr2 151138241 151138512 -102118071 - MLT1B LTR MaLR -26 364 97 1908 191 11 0 chr2 151138512 151138873 -102117710 - MLT1A1 LTR MaLR 0 365 1 2008 130 38 49 chr2 151138873 151138969 -102117614 - MLT1B LTR MaLR -293 97 1 2086 209 103 22 chr2 151138988 151139485 -102117098 + MLT1E LTR MaLR 56 592 -1 1680 222 101 60 chr2 151139497 151139570 -102117013 + MLT1E-int LTR MaLR 55 124 -1247 2098 108 3 3 chr2 151139570 151139866 -102116717 + AluSx SINE Alu 1 296 -16 1680 222 101 60 chr2 151139866 151140377 -102116206 + MLT1E-int LTR MaLR 124 663 -708 1275 273 35 113 chr2 151140503 151141240 -102115343 + MLT1E-int LTR MaLR 692 1371 0 794 306 64 3 chr2 151141240 151141548 -102115035 + MLT1E LTR MaLR 1 421 -172 468 275 92 57 chr2 151141750 151142066 -102114517 - MLT1L LTR MaLR -171 444 118 266 264 97 0 chr2 151142209 151142281 -102114302 - L2 LINE L2 -10 3303 3225 231 275 75 0 chr2 151142631 151142711 -102113872 + MER91C DNA MER1_type 1 86 -54 478 304 150 18 chr2 151142738 151143064 -102113519 + L2 LINE L2 1711 2079 -1235 242 224 0 0 chr2 151143353 151143402 -102113181 + L2 LINE L2 3265 3313 0 306 132 0 0 chr2 151145723 151145776 -102110807 + (TAAA)n Simple_repeat Simple_repeat 4 56 0 214 167 15 15 chr2 151147617 151147683 -102108900 + (CA)n Simple_repeat Simple_repeat 2 67 0 21 71 0 0 chr2 151151823 151151865 -102104718 + AT_rich Low_complexity Low_complexity 1 42 0 21 36 0 0 chr2 151152290 151152318 -102104265 + AT_rich Low_complexity Low_complexity 1 28 0 325 177 25 0 chr2 151152719 151152798 -102103785 + CT-rich Low_complexity Low_complexity 2 82 0 2176 125 3 3 chr2 151152844 151153156 -102103427 - AluSp SINE Alu -1 312 1 1424 102 5 0 chr2 151155134 151155331 -102101252 - AluSq SINE Alu -5 308 111 1359 97 6 0 chr2 151155473 151155649 -102100934 + AluY SINE Alu 1 177 -134 189 107 0 0 chr2 151155663 151155691 -102100892 + (A)n Simple_repeat Simple_repeat 1 28 0 213 330 144 0 chr2 151155780 151155877 -102100706 + L2 LINE L2 3162 3272 0 249 304 14 0 chr2 151156447 151156516 -102100067 - MIR SINE MIR -109 153 84 976 309 45 26 chr2 151156549 151156804 -102099779 + L2 LINE L2 2421 2687 -627 2517 104 13 16 chr2 151156804 151157180 -102099403 - THE1C LTR MaLR 0 375 1 976 309 45 26 chr2 151157180 151157306 -102099277 + L2 LINE L2 2687 2809 -505 1022 212 67 24 chr2 151157345 151157600 -102098983 + MER58B DNA MER1_type 60 325 -16 544 260 170 45 chr2 151157624 151157936 -102098647 + L2 LINE L2 2811 3161 -152 2317 211 24 6 chr2 151158004 151158472 -102098111 - MER70B LTR ERVL -102 476 1 263 156 0 22 chr2 151158476 151158521 -102098062 + L2 LINE L2 3191 3234 -79 302 244 227 25 chr2 151158571 151158690 -102097893 - MER46A DNA MER2_type -90 146 4 * 1067 161 47 47 chr2 151158690 151158794 -102097789 + MER46A DNA MER2_type 133 236 0 2184 127 0 6 chr2 151159089 151159403 -102097180 + AluSx SINE Alu 1 312 0 25 31 0 0 chr2 151159500 151159532 -102097051 + AT_rich Low_complexity Low_complexity 1 32 0 11981 96 14 8 chr2 151159610 151162120 -102094463 - L1PA7 LINE L1 -6 6463 3942 12628 106 15 26 chr2 151162120 151164552 -102092031 - L1PA7 LINE L1 -4015 2446 1 25 0 0 0 chr2 151164652 151164677 -102091906 + AT_rich Low_complexity Low_complexity 1 25 0 2246 103 57 80 chr2 151165215 151165451 -102091132 - MSTA LTR MaLR 0 428 205 2241 117 0 0 chr2 151165451 151165751 -102090832 - AluSx SINE Alu -12 300 1 2246 103 57 80 chr2 151165751 151165952 -102090631 - MSTA LTR MaLR -223 205 1 1683 165 85 20 chr2 151167173 151167525 -102089058 + THE1C LTR MaLR 1 375 0 23 0 0 0 chr2 151168607 151168630 -102087953 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 151168691 151168713 -102087870 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr2 151172453 151172480 -102084103 + AT_rich Low_complexity Low_complexity 1 27 0 278 165 0 143 chr2 151172509 151172600 -102083983 - MER116 DNA Mariner 0 80 3 276 301 92 31 chr2 151172806 151172969 -102083614 + MLT1H1 LTR MaLR 39 254 -295 708 312 78 40 chr2 151173150 151173424 -102083159 + MLT1G LTR MaLR 15 277 -313 1262 127 80 0 chr2 151173424 151173637 -102082946 + MER30 DNA MER1_type 1 230 0 708 312 78 40 chr2 151173637 151173724 -102082859 + MLT1G LTR MaLR 277 359 -231 1931 158 8 53 chr2 151173724 151174117 -102082466 + THE1C LTR MaLR 1 375 0 708 312 78 40 chr2 151174117 151174309 -102082274 + MLT1G LTR MaLR 359 590 0 253 305 34 34 chr2 151174338 151174456 -102082127 + MIR SINE MIR 71 188 -74 1706 153 15 56 chr2 151174462 151174803 -102081780 + THE1B LTR MaLR 1 327 -37 2489 71 3 3 chr2 151174814 151175125 -102081458 - AluY SINE Alu 0 311 1 361 286 20 0 chr2 151175159 151175257 -102081326 + MIR SINE MIR 153 252 -10 23 68 0 0 chr2 151175260 151175304 -102081279 + AT_rich Low_complexity Low_complexity 1 44 0 23 33 0 0 chr2 151175720 151175750 -102080833 + AT_rich Low_complexity Low_complexity 1 30 0 779 312 32 4 chr2 151177381 151177631 -102078952 + MIR SINE MIR 3 259 -3 2136 124 0 16 chr2 151177700 151178015 -102078568 - AluSx SINE Alu 0 312 3 225 344 32 40 chr2 151178400 151178525 -102078058 - MIR3 SINE MIR -51 157 34 207 100 0 0 chr2 151180232 151180262 -102076321 + (T)n Simple_repeat Simple_repeat 1 30 0 197 297 27 27 chr2 151180608 151180682 -102075901 + L2 LINE L2 3169 3242 -71 305 303 17 11 chr2 151181606 151181781 -102074802 - HAL1b LINE L1 -248 1100 925 23 33 0 0 chr2 151181840 151181870 -102074713 + AT_rich Low_complexity Low_complexity 1 30 0 709 251 191 3 chr2 151181872 151182171 -102074412 - HAL1b LINE L1 -559 789 435 299 304 36 9 chr2 151182176 151182288 -102074295 + L2 LINE L2 3193 3307 -6 274 222 204 19 chr2 151182293 151182401 -102074182 - HAL1b LINE L1 -909 439 312 2333 83 3 0 chr2 151182414 151182714 -102073869 - AluY SINE Alu -10 301 1 1077 287 90 4 chr2 151182979 151183456 -102073127 - HAL1 LINE L1 -353 2154 1637 324 222 25 99 chr2 151183448 151183610 -102072973 - HAL1 LINE L1 -1365 1142 993 * 1150 222 129 17 chr2 151183998 151184354 -102072229 - MSTD LTR MaLR 0 396 1 222 37 0 0 chr2 151184825 151184852 -102071731 + (TG)n Simple_repeat Simple_repeat 2 28 0 465 238 38 0 chr2 151185098 151185203 -102071380 + MER5A DNA MER1_type 4 112 -77 2141 160 13 69 chr2 151185629 151186080 -102070503 - MSTB LTR MaLR 0 426 1 243 261 0 0 chr2 151187882 151187951 -102068632 + T-rich Low_complexity Low_complexity 1 69 0 233 340 31 10 chr2 151187962 151188059 -102068524 - MIR3 SINE MIR -9 199 101 * 274 299 119 22 chr2 151188057 151188191 -102068392 - L2 LINE L2 -1122 2192 2046 1025 179 57 28 chr2 151188298 151188510 -102068073 - MER20 DNA MER1_type -1 218 1 198 0 0 0 chr2 151188777 151188799 -102067784 + (T)n Simple_repeat Simple_repeat 1 22 0 188 287 74 82 chr2 151189950 151190072 -102066511 + MIR3 SINE MIR 88 208 0 1595 194 52 0 chr2 151192343 151192631 -102063952 - AluJb SINE Alu -9 303 1 2190 103 0 35 chr2 151193733 151194043 -102062540 + AluSg SINE Alu 1 299 -11 23 0 0 0 chr2 151194345 151194368 -102062215 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 151198498 151198519 -102058064 + AT_rich Low_complexity Low_complexity 1 21 0 275 239 53 80 chr2 151199598 151199711 -102056872 + L2 LINE L2 3199 3308 -5 223 410 51 0 chr2 151199919 151200036 -102056547 + L2 LINE L2 3127 3249 -23 333 264 21 71 chr2 151200611 151200751 -102055832 + MER94 DNA DNA 1 133 -1 448 353 19 6 chr2 151200755 151200911 -102055672 + MER5A DNA MER1_type 26 183 -6 1356 209 70 3 chr2 151200950 151201237 -102055346 + AluJo SINE Alu 1 306 -6 21 36 0 0 chr2 151201733 151201761 -102054822 + AT_rich Low_complexity Low_complexity 1 28 0 24 53 0 0 chr2 151203436 151203474 -102053109 + AT_rich Low_complexity Low_complexity 1 38 0 260 171 0 0 chr2 151203629 151203670 -102052913 - MIR SINE MIR -149 113 73 380 292 123 13 chr2 151203793 151203947 -102052636 - MIR SINE MIR -56 206 36 1865 291 91 31 chr2 151204288 151205116 -102051467 + L2 LINE L2 35 911 -2403 230 316 53 11 chr2 151207097 151207192 -102049391 - MIR SINE MIR 0 262 164 735 263 16 0 chr2 151207194 151207384 -102049199 + L1 LINE L1 2660 2852 -3294 424 308 45 8 chr2 151207393 151207526 -102049057 - MIR SINE MIR -98 164 27 633 273 127 23 chr2 151208252 151208472 -102048111 - MIR SINE MIR -2 260 18 219 367 137 19 chr2 151210101 151210371 -102046212 - L2 LINE L2 -352 2962 2661 418 260 19 0 chr2 151210875 151210979 -102045604 + L2 LINE L2 3204 3309 -4 475 311 22 0 chr2 151211172 151211307 -102045276 + MER5B DNA MER1_type 21 158 -20 215 304 13 89 chr2 151211444 151211523 -102045060 - L2 LINE L2 0 3272 3200 225 293 67 60 chr2 151212496 151212646 -102043937 + MIR SINE MIR 2 152 -110 290 309 73 8 chr2 151212815 151212938 -102043645 - L2 LINE L2 -4 3309 3179 24 0 0 0 chr2 151213221 151213245 -102043338 + AT_rich Low_complexity Low_complexity 1 24 0 236 217 58 0 chr2 151213450 151213519 -102043064 + MER116 DNA Mariner 2 74 -6 181 346 39 13 chr2 151213695 151213773 -102042810 + L3b LINE CR1 1399 1478 -105 21 0 0 0 chr2 151214089 151214110 -102042473 + AT_rich Low_complexity Low_complexity 1 21 0 184 258 56 45 chr2 151214359 151214448 -102042135 - MIR SINE MIR -65 197 108 223 269 25 84 chr2 151214895 151215014 -102041569 + L3 LINE CR1 1069 1180 -397 21 0 0 0 chr2 151215391 151215412 -102041171 + AT_rich Low_complexity Low_complexity 1 21 0 576 170 0 0 chr2 151215683 151215789 -102040794 + (TG)n Simple_repeat Simple_repeat 2 107 0 281 348 0 43 chr2 151216243 151216384 -102040199 - MER5B DNA MER1_type -29 149 15 501 334 171 32 chr2 151217693 151218622 -102037961 + L2 LINE L2 1723 2780 -534 326 333 109 34 chr2 151218792 151219113 -102037470 + L2 LINE L2 2966 3310 -3 21 0 0 0 chr2 151220548 151220569 -102036014 + AT_rich Low_complexity Low_complexity 1 21 0 2191 282 97 12 chr2 151221865 151223000 -102033583 + L1ME1 LINE L1 571 1801 -4595 307 182 82 0 chr2 151223002 151223112 -102033471 + L1ME1 LINE L1 2039 2157 -4239 1600 204 3 7 chr2 151223307 151223615 -102032968 - AluJb SINE Alu -5 307 1 307 277 100 27 chr2 151223715 151223935 -102032648 + L1ME1 LINE L1 2200 2435 -3780 2048 156 18 80 chr2 151224007 151224444 -102032139 - MSTB LTR MaLR -2 424 15 2924 271 67 39 chr2 151224468 151225572 -102031011 + L1ME1 LINE L1 2807 3962 -2253 2212 131 113 15 chr2 151225572 151225962 -102030621 + MSTA LTR MaLR 1 428 0 2924 271 67 39 chr2 151225962 151226315 -102030268 + L1ME1 LINE L1 3962 4304 -1911 1048 154 23 0 chr2 151226311 151226486 -102030097 + L1PA15 LINE L1 5725 5903 -262 * 970 258 86 64 chr2 151226489 151226990 -102029593 + L1ME1 LINE L1 5718 6229 -6 420 111 0 0 chr2 151227112 151227175 -102029408 + (GA)n Simple_repeat Simple_repeat 2 64 0 301 315 87 54 chr2 151227336 151227485 -102029098 - L2 LINE L2 0 3272 3119 216 67 0 0 chr2 151228714 151228744 -102027839 + (TA)n Simple_repeat Simple_repeat 2 31 0 28 61 0 0 chr2 151228931 151228980 -102027603 + AT_rich Low_complexity Low_complexity 1 49 0 3480 232 39 16 chr2 151231386 151232689 -102023894 + L1MCa LINE L1 2287 3620 -2806 22 0 0 0 chr2 151233183 151233205 -102023378 + AT_rich Low_complexity Low_complexity 1 22 0 329 324 79 11 chr2 151233855 151234083 -102022500 - MIR SINE MIR -12 250 4 218 317 134 0 chr2 151234242 151234324 -102022259 + L3 LINE CR1 539 631 -946 347 352 45 11 chr2 151234879 151235055 -102021528 + L3 LINE CR1 986 1167 -410 251 358 0 18 chr2 151235086 151235195 -102021388 - MIR SINE MIR -33 229 123 1585 276 84 50 chr2 151235765 151236492 -102020091 - MER21B LTR ERV1 -109 754 3 423 0 0 0 chr2 151238509 151238556 -102018027 + (CA)n Simple_repeat Simple_repeat 2 48 0 215 383 101 7 chr2 151240895 151241044 -102015539 + L2 LINE L2 2174 2336 -978 29 0 0 0 chr2 151241085 151241114 -102015469 + AT_rich Low_complexity Low_complexity 1 29 0 384 333 65 52 chr2 151241430 151241739 -102014844 - MLT1K LTR MaLR -191 397 85 219 36 0 0 chr2 151242137 151242165 -102014418 + (T)n Simple_repeat Simple_repeat 1 28 0 360 273 53 33 chr2 151242173 151242323 -102014260 + L3b LINE CR1 1222 1374 -209 819 190 6 13 chr2 151242623 151242781 -102013802 - MER5A DNA MER1_type -29 160 4 24 0 0 0 chr2 151243491 151243515 -102013068 + AT_rich Low_complexity Low_complexity 1 24 0 228 69 0 0 chr2 151245118 151245147 -102011436 - MLT2B1 LTR ERVL 0 520 492 180 77 0 0 chr2 151245160 151245186 -102011397 + (TA)n Simple_repeat Simple_repeat 2 27 0 239 254 16 0 chr2 151245205 151245268 -102011315 + (TATATG)n Simple_repeat Simple_repeat 5 68 0 1095 243 78 33 chr2 151245344 151245726 -102010857 - MLT2B1 LTR ERVL -50 465 26 211 111 0 28 chr2 151245733 151245769 -102010814 + (TTTTC)n Simple_repeat Simple_repeat 2 36 0 26 30 0 0 chr2 151246761 151246794 -102009789 + AT_rich Low_complexity Low_complexity 1 33 0 2695 173 2 4 chr2 151247463 151247931 -102008652 - MLT1C LTR MaLR 0 467 1 270 95 0 0 chr2 151248887 151248929 -102007654 + (GA)n Simple_repeat Simple_repeat 1 42 0 1467 87 22 22 chr2 151251472 151251702 -102004881 - L1PA11 LINE L1 -1 6173 5944 362 197 0 15 chr2 151252199 151252265 -102004318 + AluJ/FLAM SINE Alu 1 65 -237 227 333 0 0 chr2 151252395 151252485 -102004098 - L1MC4 LINE L1 -1339 6703 6614 263 266 0 18 chr2 151252485 151252500 -102004083 + (CATATA)n Simple_repeat Simple_repeat 10 112 0 335 368 23 23 chr2 151254900 151255120 -102001463 + L2 LINE L2 2564 2783 -531 189 214 0 0 chr2 151255288 151255330 -102001253 + (CA)n Simple_repeat Simple_repeat 1 42 0 279 329 59 7 chr2 151255850 151256002 -102000581 - L3b LINE CR1 -141 1442 1283 2074 122 14 0 chr2 151256710 151257004 -101999579 - AluSg SINE Alu -12 298 1 25 31 0 0 chr2 151257075 151257107 -101999476 + AT_rich Low_complexity Low_complexity 1 32 0 410 236 45 111 chr2 151258113 151258204 -101998379 + MIR SINE MIR 77 150 -112 531 244 23 42 chr2 151258204 151258421 -101998162 + MER58C DNA MER1_type 2 214 -1 410 236 45 111 chr2 151258421 151258528 -101998055 + MIR SINE MIR 150 262 0 4475 145 88 36 chr2 151258636 151258885 -101997698 + Tigger3b DNA MER2_type 1 236 -2792 2126 120 3 0 chr2 151258885 151259177 -101997406 - AluSx SINE Alu -19 293 1 4475 145 88 36 chr2 151259177 151259580 -101997003 + Tigger3b DNA MER2_type 236 719 -2309 2019 140 76 15 chr2 151259580 151259922 -101996661 + THE1B LTR MaLR 2 364 0 4475 145 88 36 chr2 151259922 151260207 -101996376 + Tigger3b DNA MER2_type 719 988 -243 355 97 0 16 chr2 151260308 151260370 -101996213 - LOR1-int LTR ERV1 -4065 4055 3995 6465 106 9 24 chr2 151260419 151260996 -101995587 - LOR1-int LTR ERV1 -4136 3984 3427 1667 178 24 20 chr2 151260996 151261294 -101995289 - AluSx SINE Alu -9 303 5 6465 106 9 24 chr2 151261294 151261707 -101994876 - LOR1-int LTR ERV1 -4693 3427 3009 1124 264 80 30 chr2 151262054 151262553 -101994030 + L1ME2 LINE L1 2163 2686 -3460 238 100 20 100 chr2 151262553 151262603 -101993980 + MLT1B LTR MaLR 1 46 -344 3142 184 15 40 chr2 151262605 151263339 -101993244 + L1MD1 LINE L1 5397 6112 -130 1011 168 6 0 chr2 151263453 151263614 -101992969 + Tigger3b DNA MER2_type 1070 1231 0 2240 134 11 35 chr2 151264750 151265123 -101991460 - THE1B LTR MaLR 0 364 1 11078 113 6 0 chr2 151265123 151266692 -101989891 - THE1B-int LTR MaLR 0 1580 2 2076 138 3 69 chr2 151266693 151267083 -101989500 - THE1B LTR MaLR 0 364 1 254 280 0 27 chr2 151268547 151268622 -101987961 + CT-rich Low_complexity Low_complexity 4 76 0 442 355 91 14 chr2 151268806 151269026 -101987557 - MIR SINE MIR -6 256 20 542 308 109 55 chr2 151269113 151269614 -101986969 - L2 LINE L2 -12 3260 2680 914 244 45 12 chr2 151270009 151270255 -101986328 + MIR SINE MIR 5 258 -4 538 254 15 0 chr2 151270983 151271113 -101985470 + MIR SINE MIR 44 175 -87 2899 173 31 31 chr2 151271701 151272348 -101984235 - L1MB4 LINE L1 -1 6179 5533 222 91 0 0 chr2 151272365 151272398 -101984185 + (CA)n Simple_repeat Simple_repeat 2 34 0 3271 250 67 48 chr2 151272404 151272798 -101983785 + L1ME2 LINE L1 3787 4172 -1992 2279 92 3 0 chr2 151272798 151273091 -101983492 + AluSp SINE Alu 1 294 -19 3271 250 67 48 chr2 151273091 151275011 -101981572 + L1ME2 LINE L1 4172 6146 -18 1584 171 3 57 chr2 151275355 151275653 -101980930 - AluJb SINE Alu -30 282 1 359 307 100 20 chr2 151276338 151276488 -101980095 + L2 LINE L2 3108 3269 -3 28 0 0 0 chr2 151276561 151276589 -101979994 + AT_rich Low_complexity Low_complexity 1 28 0 768 286 28 14 chr2 151278086 151278299 -101978284 + MIR SINE MIR 23 238 -24 201 328 69 53 chr2 151278758 151278889 -101977694 - MIR3 SINE MIR -15 193 61 335 306 206 5 chr2 151278890 151279089 -101977494 + MIR SINE MIR 10 248 -14 1084 220 23 0 chr2 151280481 151280699 -101975884 + MER58A DNA MER1_type 2 224 0 2125 181 47 2 chr2 151281264 151281672 -101974911 - MSTB LTR MaLR 0 426 1 192 280 0 20 chr2 151283061 151283111 -101973472 + L2 LINE L2 3221 3269 -3 21 71 0 0 chr2 151283371 151283413 -101973170 + AT_rich Low_complexity Low_complexity 1 42 0 25 31 0 0 chr2 151284862 151284894 -101971689 + AT_rich Low_complexity Low_complexity 1 32 0 682 236 28 34 chr2 151286851 151287029 -101969554 - MER45A DNA AcHobo 0 178 2 284 259 27 129 chr2 151287208 151287355 -101969228 + MER102b DNA MER1_type 206 337 -4 588 206 7 29 chr2 151289472 151289608 -101966975 - FLAM_A SINE Alu 0 133 1 241 350 65 77 chr2 151293708 151294031 -101962552 - L2 LINE L2 -19 3253 2935 297 322 26 26 chr2 151294646 151294761 -101961822 - L2 LINE L2 -18 3295 3181 22 35 0 0 chr2 151294941 151294970 -101961613 + AT_rich Low_complexity Low_complexity 1 29 0 436 252 0 64 chr2 151295705 151295860 -101960723 + MLT1E LTR MaLR 11 156 -411 3151 224 36 3 chr2 151295860 151296578 -101960005 + L1MD2 LINE L1 5602 6343 -16 2007 146 33 12 chr2 151296589 151296918 -101959665 + THE1C LTR MaLR 1 336 -39 854 284 73 18 chr2 151297130 151297502 -101959081 - LTR16A LTR ERVL -7 443 59 356 309 49 8 chr2 151297570 151297693 -101958890 + L2 LINE L2 3185 3312 -1 2088 229 81 56 chr2 151298390 151299194 -101957389 + LTR1B LTR ERV1 1 824 -2 189 107 0 0 chr2 151299326 151299354 -101957229 + (T)n Simple_repeat Simple_repeat 1 28 0 2097 113 3 0 chr2 151300087 151300395 -101956188 - AluSq SINE Alu 0 309 1 1021 33 0 0 chr2 151300422 151300544 -101956039 + L1PA2 LINE L1 6034 6155 0 5305 107 15 5 chr2 151300861 151301655 -101954928 - L1PA13 LINE L1 -4 6159 5358 679 134 22 28 chr2 151302126 151302305 -101954278 + CT-rich Low_complexity Low_complexity 2 179 0 331 298 10 67 chr2 151302476 151302580 -101954003 + MER91A DNA MER1_type 3 100 -96 22 0 0 0 chr2 151303614 151303636 -101952947 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 151304022 151304043 -101952540 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr2 151305009 151305029 -101951554 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 228 122 0 0 chr2 151305135 151305176 -101951407 + (GA)n Simple_repeat Simple_repeat 2 42 0 181 342 44 9 chr2 151306012 151306126 -101950457 - L2 LINE L2 -1 3312 3195 29 47 0 0 chr2 151306760 151306803 -101949780 + AT_rich Low_complexity Low_complexity 1 43 0 183 340 43 32 chr2 151307707 151307801 -101948782 - MIR SINE MIR -93 115 21 279 79 0 0 chr2 151311907 151311945 -101944638 + (TA)n Simple_repeat Simple_repeat 1 38 0 325 125 18 18 chr2 151311977 151312033 -101944550 - MIR SINE MIR -164 98 43 201 224 0 40 chr2 151312331 151312407 -101944176 + T-rich Low_complexity Low_complexity 2 74 0 21 0 0 0 chr2 151314086 151314107 -101942476 + AT_rich Low_complexity Low_complexity 1 21 0 2270 93 0 3 chr2 151314173 151314474 -101942109 - AluSq SINE Alu -13 300 1 191 204 0 23 chr2 151314531 151314575 -101942008 - L3 LINE CR1 -4 1573 1531 * 1247 320 159 0 chr2 151314561 151315179 -101941404 - L2 LINE L2 -1075 2239 1524 191 320 104 0 chr2 151315254 151315379 -101941204 - L2 LINE L2 -1788 1526 1389 875 269 126 14 chr2 151315891 151316311 -101940272 - L2 LINE L2 -1849 1465 999 24 0 0 0 chr2 151317722 151317746 -101938837 + AT_rich Low_complexity Low_complexity 1 24 0 511 254 36 119 chr2 151318656 151318999 -101937584 + MER102a DNA MER1_type 20 326 -4 1136 207 53 0 chr2 151320082 151320309 -101936274 - MIR SINE MIR -2 260 22 333 82 0 0 chr2 151320967 151321016 -101935567 + (GA)n Simple_repeat Simple_repeat 1 49 0 21 57 0 0 chr2 151321574 151321609 -101934974 + AT_rich Low_complexity Low_complexity 1 35 0 1708 181 3 10 chr2 151321825 151322124 -101934459 + AluJb SINE Alu 1 297 -15 1941 120 0 0 chr2 151322181 151322488 -101934095 + AluSx SINE Alu 1 307 0 225 284 14 14 chr2 151322671 151322745 -101933838 + (TATG)n Simple_repeat Simple_repeat 2 75 0 402 319 101 47 chr2 151322789 151323196 -101933387 + L1ME LINE L1 4902 5330 -816 634 256 135 13 chr2 151323246 151323558 -101933025 + L1ME LINE L1 5455 5804 -317 382 188 17 33 chr2 151323686 151323867 -101932716 + (CATATA)n Simple_repeat Simple_repeat 1 178 0 201 121 0 0 chr2 151323936 151323969 -101932614 + (TA)n Simple_repeat Simple_repeat 1 33 0 25 51 0 0 chr2 151324101 151324140 -101932443 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr2 151325078 151325099 -101931484 + AT_rich Low_complexity Low_complexity 1 21 0 3394 85 23 6 chr2 151325477 151325959 -101930624 - L1PA10 LINE L1 0 6168 5679 225 242 32 0 chr2 151326014 151326076 -101930507 - MER5A DNA MER1_type -115 74 11 373 321 73 50 chr2 151326141 151326484 -101930099 + L1ME4a LINE L1 4795 5145 -1001 433 302 123 30 chr2 151326581 151326915 -101929668 + L1ME4a LINE L1 5599 5963 -158 214 73 49 0 chr2 151326941 151326982 -101929601 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 370 242 81 25 chr2 151326989 151327150 -101929433 + L1ME4a LINE L1 5946 6115 -6 21 0 0 0 chr2 151328089 151328110 -101928473 + AT_rich Low_complexity Low_complexity 1 21 0 206 200 62 0 chr2 151328845 151328910 -101927673 + (TATAA)n Simple_repeat Simple_repeat 1 69 0 459 276 95 25 chr2 151328978 151329221 -101927362 + MIR SINE MIR 3 262 0 334 313 84 28 chr2 151329612 151329826 -101926757 - L2 LINE L2 -904 2410 2185 717 284 9 32 chr2 151329909 151330127 -101926456 - MER20 DNA MER1_type -1 218 6 238 361 69 32 chr2 151330136 151330482 -101926101 - L2 LINE L2 -1212 2102 1744 1394 279 55 46 chr2 151330674 151331215 -101925368 - MLT1E LTR MaLR -4 589 44 274 292 115 0 chr2 151332222 151332335 -101924248 + MIR SINE MIR 91 216 -46 23 33 0 0 chr2 151332439 151332469 -101924114 + AT_rich Low_complexity Low_complexity 1 30 0 436 308 79 48 chr2 151333235 151333711 -101922872 - MLT1J2 LTR MaLR 0 450 3 21 0 0 0 chr2 151334136 151334157 -101922426 + AT_rich Low_complexity Low_complexity 1 21 0 2190 99 7 0 chr2 151334977 151335271 -101921312 + AluSp SINE Alu 1 296 -17 359 250 263 0 chr2 151335277 151335437 -101921146 + MER102a DNA MER1_type 105 306 -24 526 256 23 23 chr2 151335505 151335638 -101920945 + Charlie1 DNA MER1_type 1 133 -2628 2347 206 81 12 chr2 151335662 151336307 -101920276 + Charlie1 DNA MER1_type 2073 2761 0 30 59 0 0 chr2 151336981 151337032 -101919551 + AT_rich Low_complexity Low_complexity 1 51 0 265 326 139 0 chr2 151338193 151338279 -101918304 - L2 LINE L2 -6 3266 3169 277 322 61 44 chr2 151340056 151340236 -101916347 - MIR3 SINE MIR -17 191 9 344 277 11 11 chr2 151341481 151341575 -101915008 + L1MC4 LINE L1 6611 6704 -1338 21 0 0 0 chr2 151341585 151341606 -101914977 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr2 151342176 151342202 -101914381 + AT_rich Low_complexity Low_complexity 1 26 0 1699 150 20 3 chr2 151342612 151342912 -101913671 - L1P LINE L1 -916 5230 4926 201 250 0 0 chr2 151343010 151343046 -101913537 + L2 LINE L2 3259 3294 -19 26 50 0 0 chr2 151343515 151343555 -101913028 + AT_rich Low_complexity Low_complexity 1 40 0 27 29 0 0 chr2 151343739 151343773 -101912810 + AT_rich Low_complexity Low_complexity 1 34 0 23 33 0 0 chr2 151344712 151344742 -101911841 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr2 151346299 151346323 -101910260 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr2 151346495 151346518 -101910065 + AT_rich Low_complexity Low_complexity 1 23 0 2227 271 32 11 chr2 151346803 151347500 -101909083 - L1ME2 LINE L1 -46 6118 5408 1513 95 0 29 chr2 151347830 151348071 -101908512 + L1MA2 LINE L1 6071 6304 0 21 36 0 0 chr2 151348071 151348099 -101908484 + AT_rich Low_complexity Low_complexity 1 28 0 750 214 0 0 chr2 151348199 151348330 -101908253 + FLAM_A SINE Alu 1 131 -2 41 48 0 0 chr2 151350523 151350585 -101905998 + AT_rich Low_complexity Low_complexity 1 62 0 362 264 9 18 chr2 151351571 151351681 -101904902 - Charlie2a DNA MER1_type -6 2856 2748 1084 211 32 11 chr2 151351685 151351964 -101904619 - Charlie2a DNA MER1_type -1852 1010 726 1009 288 155 10 chr2 151351954 151352361 -101904222 - Charlie2a DNA MER1_type -2388 474 9 * 244 303 26 0 chr2 151352878 151352954 -101903629 + (CATG)n Simple_repeat Simple_repeat 3 80 0 891 209 19 33 chr2 151353568 151354071 -101902512 + MLT1G1 LTR MaLR 1 555 0 370 307 87 37 chr2 151354224 151354465 -101902118 + L2 LINE L2 1197 1449 -1865 433 390 107 20 chr2 151354465 151355363 -101901220 + L2 LINE L2 1593 2568 -746 546 314 41 85 chr2 151355659 151355977 -101900606 + L2 LINE L2 2969 3272 0 22 56 0 0 chr2 151356300 151356336 -101900247 + AT_rich Low_complexity Low_complexity 1 36 0 239 251 90 28 chr2 151357531 151357647 -101898936 + LTR16A LTR ERVL 1 128 -322 * 457 286 39 13 chr2 151357636 151357790 -101898793 + LTR16A LTR ERVL 287 444 -6 203 227 152 0 chr2 151358274 151358340 -101898243 - MER5B DNA MER1_type -77 101 26 269 306 14 0 chr2 151358457 151358529 -101898054 - MER5A DNA MER1_type -80 109 37 511 15 29 0 chr2 151359264 151359332 -101897251 + (TCTA)n Simple_repeat Simple_repeat 3 72 0 625 182 5 177 chr2 151360148 151360368 -101896215 - MER5A DNA MER1_type -5 184 3 804 297 55 26 chr2 151360441 151360784 -101895799 + L1ME2 LINE L1 5803 6155 -9 320 289 201 29 chr2 151361106 151361345 -101895238 + L2 LINE L2 3033 3312 -1 258 373 62 12 chr2 151362437 151362598 -101893985 - MIR3 SINE MIR -1 207 39 1757 215 99 82 chr2 151365865 151366508 -101890075 - MLT1E1 LTR MaLR 0 654 1 435 63 0 0 chr2 151366626 151366689 -101889894 + (CA)n Simple_repeat Simple_repeat 2 64 0 501 110 30 0 chr2 151366891 151366991 -101889592 + GA-rich Low_complexity Low_complexity 2 104 0 233 250 0 0 chr2 151367039 151367091 -101889492 + MER58 DNA MER1_type 2355 2406 -14 388 292 32 5 chr2 151367457 151367642 -101888941 - HAL1 LINE L1 -1093 1414 1225 319 306 57 83 chr2 151367801 151367994 -101888589 - HAL1 LINE L1 -2319 188 1 1147 282 158 26 chr2 151368019 151369176 -101887407 - L1MCc LINE L1 -4807 2134 815 23 33 0 0 chr2 151370474 151370504 -101886079 + AT_rich Low_complexity Low_complexity 1 30 0 36 23 0 0 chr2 151371503 151371546 -101885037 + AT_rich Low_complexity Low_complexity 1 43 0 5241 253 76 34 chr2 151371820 151372132 -101884451 + L1MA9 LINE L1 2 299 -5911 1754 172 26 35 chr2 151372132 151372509 -101884074 - THE1C LTR MaLR -1 374 1 8519 186 15 42 chr2 151372509 151374132 -101882451 - THE1C-int LTR MaLR 0 1580 1 1778 162 29 50 chr2 151374132 151374515 -101882068 - THE1C LTR MaLR 0 375 1 5241 253 76 34 chr2 151374515 151375248 -101881335 + L1MA9 LINE L1 299 1000 -5210 251 27 0 27 chr2 151375248 151375285 -101881298 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 5241 253 76 34 chr2 151375285 151377641 -101878942 + L1MA9 LINE L1 1000 3227 -2983 1173 157 5 5 chr2 151377662 151377866 -101878717 + AluSg/x SINE Alu 94 297 -15 738 186 105 0 chr2 151377871 151378081 -101878502 + L1MA9 LINE L1 3240 3471 -2739 * 4094 171 62 71 chr2 151378073 151379969 -101876614 + L1MA9 LINE L1 4472 6376 0 714 273 29 5 chr2 151380247 151380456 -101876127 - MER102a DNA MER1_type 0 330 117 23 0 0 0 chr2 151380926 151380949 -101875634 + AT_rich Low_complexity Low_complexity 1 23 0 1676 211 70 51 chr2 151381097 151381427 -101875156 + L1MD2 LINE L1 5714 6057 -302 6628 79 4 11 chr2 151381427 151382444 -101874139 - L1PA13 LINE L1 0 6163 5144 1676 211 70 51 chr2 151382444 151382587 -101873996 + L1MD2 LINE L1 6057 6196 -163 651 181 60 0 chr2 151382588 151382737 -101873846 + L1MD1 LINE L1 6085 6242 0 269 306 0 0 chr2 151382774 151382846 -101873737 + MER102a DNA MER1_type 270 341 0 1985 107 14 4 chr2 151382980 151383299 -101873284 + AluY SINE Alu 1 322 0 432 0 0 0 chr2 151385017 151385065 -101871518 + (CA)n Simple_repeat Simple_repeat 2 49 0 193 336 107 23 chr2 151385249 151385380 -101871203 - L3b LINE CR1 -69 1514 1373 726 279 29 63 chr2 151385425 151385776 -101870807 - L2 LINE L2 -2 3311 2973 28 29 0 0 chr2 151385951 151385986 -101870597 + AT_rich Low_complexity Low_complexity 1 35 0 629 312 30 5 chr2 151386147 151386349 -101870234 - MER63A DNA MER1_type -1 209 3 982 54 78 0 chr2 151387956 151388085 -101868498 + MER85 DNA T2_type 1 139 0 188 179 26 0 chr2 151388252 151388291 -101868292 - L2 LINE L2 -4 3309 3270 13781 149 26 10 chr2 151389494 151389697 -101866886 - Tigger1 DNA MER2_type 0 2418 2220 2137 119 0 25 chr2 151389697 151390016 -101866567 + AluSx SINE Alu 1 311 -1 13781 149 26 10 chr2 151390016 151392140 -101864443 - Tigger1 DNA MER2_type -198 2220 55 1705 43 0 9 chr2 151392147 151392379 -101864204 - L1PA4 LINE L1 -2928 3218 2989 17482 44 5 1 chr2 151392379 151395312 -101861271 + L1PA4 LINE L1 3215 6151 -4 305 170 0 0 chr2 151395312 151395359 -101861224 - Tigger1 DNA MER2_type -2371 47 1 23 33 0 0 chr2 151395770 151395800 -101860783 + AT_rich Low_complexity Low_complexity 1 30 0 297 143 0 36 chr2 151396042 151396126 -101860457 + (GA)n Simple_repeat Simple_repeat 1 81 0 22 0 0 0 chr2 151398195 151398217 -101858366 + AT_rich Low_complexity Low_complexity 1 22 0 2247 89 0 26 chr2 151398281 151398585 -101857998 - AluY SINE Alu -15 296 1 341 333 90 11 chr2 151398852 151399029 -101857554 - MIR SINE MIR -8 254 64 407 299 95 57 chr2 151399067 151399481 -101857102 - LTR33A LTR ERVL -10 511 20 21 0 0 0 chr2 151399658 151399679 -101856904 + AT_rich Low_complexity Low_complexity 1 21 0 342 250 0 0 chr2 151400590 151400694 -101855889 + (TCCA)n Simple_repeat Simple_repeat 1 104 0 522 334 98 49 chr2 151400705 151401578 -101855005 - L2 LINE L2 0 3313 2405 201 200 111 0 chr2 151401754 151401799 -101854784 + L2 LINE L2 3264 3313 0 30 0 0 0 chr2 151402288 151402318 -101854265 + AT_rich Low_complexity Low_complexity 1 30 0 239 293 78 54 chr2 151402978 151403145 -101853438 - MIR SINE MIR -75 187 17 180 294 109 0 chr2 151403784 151403876 -101852707 - L2 LINE L2 0 3313 3212 207 0 0 0 chr2 151406953 151406976 -101849607 + (A)n Simple_repeat Simple_repeat 1 23 0 463 233 107 20 chr2 151407679 151407829 -101848754 - MER97a DNA MER1_type? -5 889 727 701 188 65 0 chr2 151407832 151407986 -101848597 + L1MD1 LINE L1 6073 6236 -6 1930 157 62 45 chr2 151408286 151408707 -101847876 + MSTA LTR MaLR 1 428 0 21 0 0 0 chr2 151408711 151408732 -101847851 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr2 151408860 151408897 -101847686 + AT_rich Low_complexity Low_complexity 1 37 0 234 197 70 28 chr2 151408907 151408978 -101847605 + L1MC5 LINE L1 7852 7925 -36 982 165 11 0 chr2 151409129 151409317 -101847266 + L1MC3 LINE L1 7504 7693 -92 1368 267 77 66 chr2 151409325 151410055 -101846528 - MER97b DNA MER1_type? -315 738 1 252 275 153 61 chr2 151410058 151410189 -101846394 - L2 LINE L2 -43 3270 3128 1140 295 83 28 chr2 151410193 151411731 -101844852 - ERVL LTR ERVL -2721 3043 1304 227 343 0 0 chr2 151412861 151412928 -101843655 - LTR16B LTR ERVL 0 464 398 21 36 0 0 chr2 151413502 151413530 -101843053 + AT_rich Low_complexity Low_complexity 1 28 0 443 329 62 34 chr2 151413712 151414068 -101842515 + L1M4 LINE L1 4562 4927 -1219 220 382 24 12 chr2 151414350 151414520 -101842063 - L2 LINE L2 -476 2838 2667 237 281 16 0 chr2 151414536 151414600 -101841983 + L1ME4a LINE L1 5963 6027 -94 2827 111 19 5 chr2 151416448 151416879 -101839704 - L1PA10 LINE L1 0 6168 5732 1950 128 0 10 chr2 151419841 151420178 -101836405 + AluSx SINE Alu 1 312 0 29 47 0 0 chr2 151420611 151420654 -101835929 + AT_rich Low_complexity Low_complexity 1 43 0 2061 124 0 13 chr2 151421157 151421455 -101835128 + AluSx SINE Alu 1 294 -18 680 216 84 5 chr2 151422811 151423001 -101833582 + MER3 DNA MER1_type 4 208 -1 232 287 96 54 chr2 151423095 151423262 -101833321 - L2 LINE L2 -195 3077 2904 462 380 56 0 chr2 151423355 151423571 -101833012 - L2 LINE L2 -499 2815 2588 1923 175 32 33 chr2 151423574 151424129 -101832454 + MLT2A2 LTR ERVL 1 554 0 422 359 76 20 chr2 151424130 151424578 -101832005 - L2 LINE L2 -727 2587 2115 2255 95 7 0 chr2 151425306 151425612 -101830971 + AluSx SINE Alu 1 308 -4 266 297 29 0 chr2 151425616 151425754 -101830829 + (TA)n Simple_repeat Simple_repeat 1 142 0 10550 156 19 4 chr2 151425787 151428795 -101827788 - L1MA2 LINE L1 0 7723 4672 * 13116 162 37 15 chr2 151428791 151429418 -101827165 - L1MA2 LINE L1 -3467 4098 3486 180 77 0 0 chr2 151429418 151429444 -101827139 + (TTTTA)n Simple_repeat Simple_repeat 3 28 0 13116 162 37 15 chr2 151429444 151429645 -101826938 - L1MA2 LINE L1 -4079 3486 3291 2204 111 7 0 chr2 151429645 151429943 -101826640 - AluSp SINE Alu -13 300 1 13116 162 37 15 chr2 151429943 151431823 -101824760 - L1MA2 LINE L1 -4274 3291 1325 6576 185 31 5 chr2 151432269 151433483 -101823100 - L1MA2 LINE L1 -6219 1346 101 532 309 47 22 chr2 151433499 151433796 -101822787 - MLT1H LTR MaLR -97 452 104 24 0 0 0 chr2 151433876 151433900 -101822683 + AT_rich Low_complexity Low_complexity 1 24 0 278 295 54 27 chr2 151434152 151434264 -101822319 + L2 LINE L2 3197 3311 -2 458 262 40 8 chr2 151434577 151434703 -101821880 - MER94 DNA DNA -4 130 1 818 134 0 7 chr2 151435672 151435814 -101820769 + (TTCC)n Simple_repeat Simple_repeat 2 142 0 229 226 16 16 chr2 151435816 151435878 -101820705 + CT-rich Low_complexity Low_complexity 1 62 0 33 43 0 29 chr2 151437321 151437352 -101819231 + AT_rich Low_complexity Low_complexity 1 31 -36 2219 64 25 0 chr2 151437352 151437635 -101818948 - AluY SINE Alu -21 290 1 33 43 0 29 chr2 151437635 151437672 -101818911 + AT_rich Low_complexity Low_complexity 31 67 0 318 387 79 9 chr2 151437817 151438238 -101818345 - L2 LINE L2 -217 3096 2649 281 313 99 40 chr2 151438283 151438587 -101817996 - MARNA DNA Mariner -13 573 252 270 224 0 15 chr2 151438618 151438685 -101817898 + MARNA DNA Mariner 401 466 -120 391 329 91 24 chr2 151440746 151440956 -101815627 + MIR SINE MIR 21 244 -18 5023 121 73 15 chr2 151441171 151442037 -101814546 + L1PB3 LINE L1 5228 6151 -3 21 36 0 0 chr2 151442565 151442593 -101813990 + AT_rich Low_complexity Low_complexity 1 28 0 240 307 27 0 chr2 151444206 151444281 -101812302 - L1ME2 LINE L1 -19 6145 6069 2657 23 0 0 chr2 151444557 151444856 -101811727 - AluY SINE Alu -2 309 11 201 74 0 0 chr2 151444914 151444941 -101811642 + (TTA)n Simple_repeat Simple_repeat 2 28 0 30 0 0 0 chr2 151445322 151445352 -101811231 + AT_rich Low_complexity Low_complexity 1 30 0 247 312 52 58 chr2 151446271 151446425 -101810158 - L2 LINE L2 -192 3121 2969 620 298 109 42 chr2 151447133 151447536 -101809047 + HAL1 LINE L1 1336 1765 -742 1487 171 20 13 chr2 151448520 151448818 -101807765 + L1MB5 LINE L1 5866 6165 -9 34 24 0 0 chr2 151448940 151448981 -101807602 + AT_rich Low_complexity Low_complexity 1 41 0 22 35 0 0 chr2 151451146 151451175 -101805408 + AT_rich Low_complexity Low_complexity 1 29 0 225 0 0 0 chr2 151451513 151451538 -101805045 + (AAGTG)n Simple_repeat Simple_repeat 1 25 0 22 94 0 0 chr2 151451986 151452050 -101804533 + AT_rich Low_complexity Low_complexity 1 64 0 487 128 32 0 chr2 151452678 151452772 -101803811 + CT-rich Low_complexity Low_complexity 3 99 0 329 346 57 0 chr2 151453194 151453353 -101803230 + MIR SINE MIR 94 261 -1 206 261 15 0 chr2 151454892 151454957 -101801626 + (TA)n Simple_repeat Simple_repeat 2 67 0 1574 158 6 64 chr2 151455687 151456016 -101800567 + AluJb SINE Alu 3 312 0 234 191 0 0 chr2 151456508 151456555 -101800028 - LTR66 LTR ERVL -170 440 394 228 174 0 0 chr2 151456515 151456561 -101800022 + LTR66 LTR ERVL 394 439 -171 * 269 100 20 0 chr2 151456634 151456684 -101799899 + (TTTTTG)n Simple_repeat Simple_repeat 3 53 0 27 29 0 0 chr2 151458275 151458309 -101798274 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr2 151458619 151458640 -101797943 + AT_rich Low_complexity Low_complexity 1 21 0 207 69 0 0 chr2 151458640 151458669 -101797914 + (CA)n Simple_repeat Simple_repeat 2 30 0 12399 30 1 0 chr2 151458776 151461067 -101795516 + L1PA4 LINE L1 3883 6152 -3 246 254 34 17 chr2 151461365 151461483 -101795100 + (TA)n Simple_repeat Simple_repeat 1 120 0 6554 144 25 5 chr2 151461503 151463043 -101793540 - L1MA2 LINE L1 -4 7719 6148 842 144 72 0 chr2 151463040 151463179 -101793404 - L1MA2 LINE L1 -6555 1010 862 * 498 165 13 0 chr2 151463179 151463258 -101793325 + L1M1 LINE L1 163 242 -7323 4130 216 19 7 chr2 151463420 151464252 -101792331 - L1MA2 LINE L1 -6706 859 18 242 199 14 135 chr2 151464260 151464401 -101792182 + LTR41 LTR ERVL 643 766 -7 233 263 59 26 chr2 151464597 151464749 -101791834 - L1M4 LINE L1 -768 5378 5222 268 196 0 22 chr2 151464788 151464880 -101791703 + (TA)n Simple_repeat Simple_repeat 1 90 0 21 0 0 0 chr2 151464995 151465016 -101791567 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr2 151465127 151465167 -101791416 + AT_rich Low_complexity Low_complexity 1 40 0 29 28 0 0 chr2 151465270 151465306 -101791277 + AT_rich Low_complexity Low_complexity 1 36 0 233 261 9 26 chr2 151465693 151465808 -101790775 + T-rich Low_complexity Low_complexity 2 114 0 439 120 0 87 chr2 151466569 151466661 -101789922 + L1PA16 LINE L1 6077 6160 -6 31 96 0 0 chr2 151466675 151466769 -101789814 + AT_rich Low_complexity Low_complexity 1 94 0 347 257 38 56 chr2 151466772 151467023 -101789560 + L1MEc LINE L1 1113 1321 -4884 2117 266 109 26 chr2 151467212 151468891 -101787692 + L1MB7 LINE L1 746 2665 -3717 5299 232 59 45 chr2 151468900 151469819 -101786764 + L1MB7 LINE L1 3460 4365 -2055 2111 103 0 44 chr2 151469819 151470139 -101786444 - AluSc SINE Alu -3 306 1 5299 232 59 45 chr2 151470139 151470417 -101786166 + L1MB7 LINE L1 4365 4638 -1782 2219 106 7 0 chr2 151470417 151470718 -101785865 + AluSg SINE Alu 1 303 -7 5299 232 59 45 chr2 151470718 151472440 -101784143 + L1MB7 LINE L1 4638 6412 -8 1700 216 5 11 chr2 151472708 151473079 -101783504 + L1MB7 LINE L1 5808 6176 -8 25 99 0 0 chr2 151473209 151473290 -101783293 + AT_rich Low_complexity Low_complexity 1 81 0 30 45 0 0 chr2 151473618 151473662 -101782921 + AT_rich Low_complexity Low_complexity 1 44 0 296 274 27 0 chr2 151473764 151473837 -101782746 - MER63 DNA MER1_type -309 752 678 8289 63 1 22 chr2 151473874 151475154 -101781429 - L1PA6 LINE L1 -7 6147 4902 2373 87 0 0 chr2 151475154 151475464 -101781119 - AluY SINE Alu -1 310 1 8289 63 1 22 chr2 151475464 151476084 -101780499 - L1PA6 LINE L1 -1252 4902 4270 10667 72 1 1 chr2 151476084 151477522 -101779061 + L1PA6 LINE L1 2816 4252 -1894 27 0 0 0 chr2 151478716 151478743 -101777840 + AT_rich Low_complexity Low_complexity 1 27 0 1342 216 43 25 chr2 151478743 151479021 -101777562 - AluJo SINE Alu -27 285 3 2115 97 3 7 chr2 151480462 151480771 -101775812 + AluSp SINE Alu 6 313 0 215 261 15 0 chr2 151481844 151481909 -101774674 + (TA)n Simple_repeat Simple_repeat 2 67 0 1701 230 50 19 chr2 151482810 151483271 -101773312 - MLT1D LTR MaLR -30 475 1 268 356 111 22 chr2 151483309 151483677 -101772906 + L2 LINE L2 1720 2120 -1194 280 306 20 20 chr2 151483913 151484011 -101772572 - MIR SINE MIR -70 192 95 259 246 0 0 chr2 151484480 151484541 -101772042 + L1M4 LINE L1 4683 4743 -1403 1969 255 46 12 chr2 151484542 151485503 -101771080 + L1M4 LINE L1 4713 5702 -482 35 24 0 0 chr2 151485662 151485704 -101770879 + AT_rich Low_complexity Low_complexity 1 42 0 2043 122 3 3 chr2 151487312 151487607 -101768976 - AluSx SINE Alu -17 295 1 1993 151 48 8 chr2 151487712 151488064 -101768519 - Tigger2 DNA MER2_type -3 2715 2350 182 340 106 32 chr2 151488620 151488714 -101767869 - L2 LINE L2 -30 3242 3142 275 405 97 17 chr2 151488829 151489264 -101767319 - L2 LINE L2 -243 3029 2560 554 232 110 7 chr2 151489365 151489520 -101767063 + MLT1J2 LTR MaLR 1 171 -279 2232 104 0 3 chr2 151489936 151490243 -101766340 + AluSx SINE Alu 1 306 -6 1575 186 3 0 chr2 151490533 151490840 -101765743 + AluSp SINE Alu 6 313 0 405 288 30 15 chr2 151493667 151493799 -101762784 + MIR SINE MIR 117 250 -12 458 340 85 23 chr2 151493927 151494372 -101762211 - L2 LINE L2 -142 3171 2703 1327 195 24 37 chr2 151495645 151495973 -101760610 + MER33 DNA MER1_type 1 324 0 1983 141 7 3 chr2 151495994 151496300 -101760283 + AluSx SINE Alu 1 307 -5 1768 176 20 8 chr2 151496425 151496783 -101759800 + MER47A DNA MER2_type 1 362 -4 22 88 0 0 chr2 151497142 151497199 -101759384 + AT_rich Low_complexity Low_complexity 1 57 0 252 0 0 0 chr2 151498121 151498149 -101758434 + (TG)n Simple_repeat Simple_repeat 1 28 0 21 0 0 56 chr2 151498286 151498301 -101758282 + AT_rich Low_complexity Low_complexity 1 15 -19 813 188 0 0 chr2 151498301 151498434 -101758149 - FLAM_C SINE Alu 0 133 1 21 0 0 56 chr2 151498434 151498454 -101758129 + AT_rich Low_complexity Low_complexity 15 34 0 329 165 0 13 chr2 151499440 151499519 -101757064 + (TA)n Simple_repeat Simple_repeat 1 78 0 317 330 19 0 chr2 151499598 151499701 -101756882 + L2 LINE L2 3193 3297 -16 22 0 0 0 chr2 151499702 151499724 -101756859 + AT_rich Low_complexity Low_complexity 1 22 0 460 313 65 71 chr2 151500392 151500899 -101755684 + L2 LINE L2 2702 3227 -86 1401 271 145 19 chr2 151500954 151501652 -101754931 + LTR50 LTR ERVL 7 792 -3 220 339 37 55 chr2 151504339 151504448 -101752135 - L2 LINE L2 -13 3259 3153 23 33 0 0 chr2 151504607 151504637 -101751946 + AT_rich Low_complexity Low_complexity 1 30 0 2053 52 0 0 chr2 151504638 151504890 -101751693 - L1PA5 LINE L1 0 6154 5903 1358 31 0 0 chr2 151504890 151505051 -101751532 + L1P2 LINE L1 5385 5545 -610 801 20 10 0 chr2 151505863 151505961 -101750622 + (TTTTA)n Simple_repeat Simple_repeat 2 180 0 1641 188 7 3 chr2 151505961 151506243 -101750340 - AluSx SINE Alu -29 283 1 1722 117 0 0 chr2 151506450 151506681 -101749902 - AluSx SINE Alu -30 282 52 2011 241 68 30 chr2 151506986 151507770 -101748813 - L1ME1 LINE L1 -262 6164 5346 2392 184 19 7 chr2 151507823 151508284 -101748299 + MLT1C LTR MaLR 1 467 0 512 251 126 0 chr2 151508284 151508491 -101748092 - L1ME1 LINE L1 -3591 2815 2583 618 14 0 0 chr2 151508504 151508575 -101748008 + (TTCC)n Simple_repeat Simple_repeat 1 71 0 498 465 58 25 chr2 151508597 151508956 -101747627 - L1MB7 LINE L1 -25 6159 5789 876 222 23 5 chr2 151508977 151509198 -101747385 - L1M4c LINE L1 -4722 1924 1700 * 2344 280 29 38 chr2 151509197 151509928 -101746655 - L1M4c LINE L1 -5815 727 4 453 305 15 0 chr2 151509926 151510126 -101746457 - L1ME1 LINE L1 -4000 2587 2385 * 384 269 33 57 chr2 151510130 151510342 -101746241 - L1ME1 LINE L1 -4819 1587 1381 813 267 23 52 chr2 151510449 151510846 -101745737 - L1ME1 LINE L1 -5242 1164 800 277 333 74 26 chr2 151511791 151511980 -101744603 + MIR SINE MIR 8 205 -57 219 88 0 0 chr2 151512778 151512812 -101743771 + (TG)n Simple_repeat Simple_repeat 2 35 0 285 267 0 13 chr2 151512812 151512887 -101743696 + (CATATA)n Simple_repeat Simple_repeat 2 75 0 229 254 75 37 chr2 151513222 151513356 -101743227 - MLT1K LTR MaLR -15 573 435 492 229 56 7 chr2 151513481 151513625 -101742958 - MER97c DNA MER1_type? -912 178 28 185 29 0 86 chr2 151513902 151513937 -101742646 + (T)n Simple_repeat Simple_repeat 1 32 0 581 246 0 0 chr2 151514591 151514705 -101741878 + MER58A DNA MER1_type 19 132 0 468 310 53 0 chr2 151514774 151514945 -101741638 - MIR SINE MIR -8 254 75 297 370 49 31 chr2 151515090 151515252 -101741331 + MIR3 SINE MIR 23 187 -21 21 36 0 0 chr2 151515578 151515606 -101740977 + AT_rich Low_complexity Low_complexity 1 28 0 204 152 22 22 chr2 151516562 151516608 -101739975 + (TG)n Simple_repeat Simple_repeat 2 47 0 202 431 16 0 chr2 151518678 151518801 -101737782 - MIR SINE MIR -68 140 16 451 322 102 37 chr2 151518830 151519075 -101737508 + MIR SINE MIR 2 262 0 2339 164 11 25 chr2 151519405 151519843 -101736740 + Tigger2a DNA MER2_type 1 432 -2 1165 199 181 3 chr2 151519920 151520202 -101736381 - MLT2C1 LTR ERVL -62 335 4 180 0 0 0 chr2 151520277 151520297 -101736286 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1919 112 7 20 chr2 151520619 151520754 -101735829 - L1PA13 LINE L1 -7 6156 6021 1663 147 137 53 chr2 151520754 151521149 -101735434 - MSTA LTR MaLR 0 428 1 1919 112 7 20 chr2 151521149 151521316 -101735267 - L1PA13 LINE L1 -142 6021 5858 402 306 72 26 chr2 151521399 151521592 -101734991 + MIR SINE MIR 61 262 0 240 351 9 0 chr2 151521628 151521739 -101734844 + MER94 DNA DNA 23 134 0 1054 297 155 11 chr2 151522437 151522973 -101733610 - MLT2F LTR ERVL -6 657 45 381 329 176 5 chr2 151523272 151523482 -101733101 + MIR SINE MIR 12 257 -5 1692 168 0 51 chr2 151523875 151524191 -101732392 + AluJo SINE Alu 1 300 -12 24 0 0 0 chr2 151524576 151524600 -101731983 + AT_rich Low_complexity Low_complexity 1 24 0 235 381 88 14 chr2 151526610 151526757 -101729826 + MIR SINE MIR 21 178 -84 400 235 29 10 chr2 151527245 151527347 -101729236 + MER5A DNA MER1_type 3 106 -83 181 290 14 14 chr2 151527330 151527399 -101729184 - MER5B DNA MER1_type -108 70 2 * 264 320 125 31 chr2 151529334 151529462 -101727121 - L2 LINE L2 -1 3271 3132 913 311 56 37 chr2 151530013 151530061 -101726522 - MLT1J2 LTR MaLR -14 436 390 1071 252 93 3 chr2 151530061 151530374 -101726209 + MER58B DNA MER1_type 1 341 0 913 311 56 37 chr2 151530374 151530753 -101725830 - MLT1J2 LTR MaLR -60 390 1 188 378 116 13 chr2 151531101 151531326 -101725257 - MIR SINE MIR -14 248 1 272 225 0 25 chr2 151532786 151532866 -101723717 + (TA)n Simple_repeat Simple_repeat 1 78 0 843 343 18 43 chr2 151532935 151533381 -101723202 - LTR16A LTR ERVL 0 450 16 653 377 62 18 chr2 151533531 151534144 -101722439 - ERVL LTR ERVL -384 5380 4741 251 260 65 81 chr2 151534294 151534417 -101722166 - ERVL LTR ERVL -812 4184 4064 448 343 105 16 chr2 151534460 151534708 -101721875 - ERVL LTR ERVL -3546 2218 1949 1215 350 39 33 chr2 151534747 151535468 -101721115 - ERVL LTR ERVL -4271 725 1 515 326 54 67 chr2 151535481 151535870 -101720713 - LTR16A LTR ERVL -15 435 52 225 107 24 4 chr2 151536485 151536691 -101719892 + AluSq SINE Alu 1 294 -6 1930 278 180 20 chr2 151536700 151537656 -101718927 - L2 LINE L2 -218 3095 1990 255 174 326 0 chr2 151538649 151538735 -101717848 + L1MC5 LINE L1 7739 7852 -109 253 346 98 29 chr2 151539410 151539615 -101716968 - L3b LINE CR1 -29 1554 1336 378 282 36 57 chr2 151539893 151540128 -101716455 + MLT1H LTR MaLR 3 284 -265 503 266 35 0 chr2 151540211 151540354 -101716229 + MLT1H LTR MaLR 402 549 0 249 282 14 14 chr2 151540862 151540933 -101715650 + L2 LINE L2 3169 3239 -33 271 327 143 18 chr2 151541401 151541618 -101714965 - L2 LINE L2 -62 3251 3008 34 72 0 0 chr2 151541843 151541912 -101714671 + AT_rich Low_complexity Low_complexity 1 69 0 891 202 0 12 chr2 151542227 151542395 -101714188 + AluJb SINE Alu 129 294 -18 2923 174 22 0 chr2 151542401 151542952 -101713631 - L1MB5 LINE L1 -9 6165 5603 2114 100 4 0 chr2 151543335 151543641 -101712942 + AluSp SINE Alu 1 307 0 21 36 0 0 chr2 151545133 151545161 -101711422 + AT_rich Low_complexity Low_complexity 1 28 0 237 163 20 0 chr2 151545457 151545506 -101711077 + (CA)n Simple_repeat Simple_repeat 1 50 0 2050 124 0 0 chr2 151547493 151547783 -101708800 + AluSx SINE Alu 1 290 -22 2124 131 48 14 chr2 151548237 151548588 -101707995 - THE1B LTR MaLR 0 364 2 702 329 108 19 chr2 151549102 151549530 -101707053 + L2 LINE L2 2839 3304 -9 1111 141 0 27 chr2 151549731 151549915 -101706668 + AluSg/x SINE Alu 132 310 0 331 250 156 0 chr2 151550022 151550118 -101706465 - L2 LINE L2 0 3313 3203 244 272 43 65 chr2 151550124 151550216 -101706367 + MIR SINE MIR 71 160 -102 255 325 8 42 chr2 151550359 151550479 -101706104 + MER117 DNA MER1_type 45 160 -37 386 16 47 16 chr2 151551021 151551085 -101705498 + (TA)n Simple_repeat Simple_repeat 2 67 0 22 35 0 0 chr2 151551099 151551128 -101705455 + AT_rich Low_complexity Low_complexity 1 29 0 475 287 12 30 chr2 151552618 151552785 -101703798 + MER112 DNA MER1_type 8 171 -89 506 383 5 0 chr2 151553428 151553637 -101702946 + MLT1K LTR MaLR 76 285 -303 10935 79 79 3 chr2 151554428 151556005 -101700578 - L1P LINE L1 -1368 4778 3083 200 243 14 0 chr2 151556129 151556203 -101700380 + (TATATG)n Simple_repeat Simple_repeat 4 78 0 183 129 0 0 chr2 151556310 151556341 -101700242 + (TCTA)n Simple_repeat Simple_repeat 1 31 0 23 0 0 0 chr2 151556560 151556583 -101700000 + AT_rich Low_complexity Low_complexity 1 23 0 29 60 0 0 chr2 151557488 151557538 -101699045 + AT_rich Low_complexity Low_complexity 1 50 0 * 2260 290 71 51 chr2 151557510 151558897 -101697686 - L2 LINE L2 0 3313 1901 307 236 0 0 chr2 151559021 151559076 -101697507 + L2 LINE L2 3245 3299 -14 359 155 0 14 chr2 151559978 151560049 -101696534 + CT-rich Low_complexity Low_complexity 2 71 0 220 313 60 12 chr2 151560458 151560541 -101696042 - L2 LINE L2 -243 3029 2943 353 344 48 55 chr2 151560867 151561178 -101695405 + L3b LINE CR1 1228 1536 -47 318 208 45 112 chr2 151561502 151561680 -101694903 + MER103 DNA DNA 1 166 0 39 38 0 0 chr2 151562010 151562063 -101694520 + AT_rich Low_complexity Low_complexity 1 53 0 258 298 0 0 chr2 151564011 151564068 -101692515 - L2 LINE L2 -28 3285 3229 360 317 17 17 chr2 151564685 151564865 -101691718 + GA-rich Low_complexity Low_complexity 1 180 0 189 171 0 0 chr2 151565292 151565327 -101691256 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 450 255 0 0 chr2 151565504 151565602 -101690981 + MIR SINE MIR 95 192 -70 428 354 105 17 chr2 151565851 151566204 -101690379 - L2 LINE L2 -1211 2103 1720 1738 235 47 16 chr2 151566242 151566732 -101689851 + MLT1D LTR MaLR 1 505 0 591 291 123 48 chr2 151566754 151566830 -101689753 + MLT1J2 LTR MaLR 74 143 -307 1899 114 14 3 chr2 151566830 151567119 -101689464 + AluSx SINE Alu 5 296 -16 591 291 123 48 chr2 151567119 151567393 -101689190 + MLT1J2 LTR MaLR 143 450 0 379 22 0 0 chr2 151567518 151567564 -101689019 - MADE1 DNA Mariner -34 46 1 881 314 65 42 chr2 151567860 151567993 -101688590 + LTR33 LTR ERVL 16 145 -376 537 16 0 0 chr2 151567993 151568055 -101688528 + (GAAA)n Simple_repeat Simple_repeat 4 65 0 881 314 65 42 chr2 151568055 151568086 -101688497 + LTR33 LTR ERVL 145 174 -347 1081 67 17 22 chr2 151568086 151568265 -101688318 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 881 314 65 42 chr2 151568265 151568593 -101687990 + LTR33 LTR ERVL 174 520 -1 221 191 88 29 chr2 151568594 151568662 -101687921 - L2 LINE L2 -511 2803 2732 * 412 296 23 23 chr2 151568639 151568771 -101687812 + MIR3 SINE MIR 43 174 -34 342 162 0 0 chr2 151568967 151569041 -101687542 + (TA)n Simple_repeat Simple_repeat 1 74 0 308 306 83 0 chr2 151570236 151570344 -101686239 - MIR SINE MIR -63 145 29 627 189 32 4 chr2 151570443 151570701 -101685882 + (TA)n Simple_repeat Simple_repeat 1 265 0 288 154 0 0 chr2 151570815 151570867 -101685716 + (CATA)n Simple_repeat Simple_repeat 2 53 0 700 325 180 16 chr2 151571570 151572075 -101684508 + L2 LINE L2 2066 2653 -661 521 309 26 110 chr2 151572928 151573200 -101683383 - L2 LINE L2 -44 3228 2980 371 320 111 35 chr2 151573195 151573625 -101682958 + L2 LINE L2 2707 3313 0 * 433 204 0 0 chr2 151575005 151575124 -101681459 - AluJb SINE Alu 0 313 195 203 179 0 0 chr2 151576101 151576140 -101680443 + A-rich Low_complexity Low_complexity 1 39 0 205 142 57 19 chr2 151576711 151576817 -101679766 + (TA)n Simple_repeat Simple_repeat 1 110 0 * 279 104 0 0 chr2 151576816 151576864 -101679719 + (GA)n Simple_repeat Simple_repeat 2 49 0 24 32 0 0 chr2 151577460 151577491 -101679092 + AT_rich Low_complexity Low_complexity 1 31 0 222 302 23 0 chr2 151577672 151577758 -101678825 + (CATA)n Simple_repeat Simple_repeat 3 90 0 227 393 52 7 chr2 151578295 151578430 -101678153 - MIR SINE MIR -48 214 74 236 361 13 51 chr2 151578754 151578912 -101677671 + MER5B DNA MER1_type 2 153 -25 281 360 46 11 chr2 151579000 151579175 -101677408 + MIR SINE MIR 32 212 -50 554 198 0 63 chr2 151579660 151579786 -101676797 + AluJb SINE Alu 94 211 -101 1657 171 35 3 chr2 151579795 151580082 -101676501 - AluSx SINE Alu -16 296 1 246 239 0 28 chr2 151580896 151580967 -101675616 + MER116 DNA Mariner 5 73 -7 1525 118 25 90 chr2 151584372 151584651 -101671932 + AluSx SINE Alu 13 273 -39 3929 196 24 7 chr2 151584904 151585646 -101670937 - MER21B LTR ERV1 -71 860 20 1970 154 58 51 chr2 151585646 151585700 -101670883 + Tigger2a DNA MER2_type 1 53 -2655 2044 106 3 56 chr2 151585700 151586020 -101670563 - AluSx SINE Alu -9 303 1 1970 154 58 51 chr2 151586020 151586394 -101670189 + Tigger2a DNA MER2_type 53 432 -2 2649 136 158 8 chr2 151586403 151586927 -101669656 + MER7C DNA MER2_type 2 602 -1 854 230 0 3 chr2 151587010 151587247 -101669336 + AluJb SINE Alu 1 308 0 189 0 0 0 chr2 151587907 151587928 -101668655 + (T)n Simple_repeat Simple_repeat 1 21 0 26 0 0 0 chr2 151588276 151588302 -101668281 + AT_rich Low_complexity Low_complexity 1 26 0 492 99 0 0 chr2 151588642 151588713 -101667870 + (TG)n Simple_repeat Simple_repeat 2 72 0 3705 196 28 50 chr2 151589653 151590585 -101665998 + L1MA7 LINE L1 5371 6281 -10 1495 77 5 5 chr2 151591423 151591639 -101664944 - AluSq SINE Alu 0 307 92 205 369 117 0 chr2 151591643 151591754 -101664829 + L2 LINE L2 3134 3257 -15 513 313 66 6 chr2 151591927 151592109 -101664474 - MIR SINE MIR -55 207 15 303 28 0 0 chr2 151592950 151592986 -101663597 + (CA)n Simple_repeat Simple_repeat 1 36 0 22 0 0 0 chr2 151594312 151594334 -101662249 + AT_rich Low_complexity Low_complexity 1 22 0 2232 94 0 3 chr2 151594964 151595262 -101661321 - AluSx SINE Alu -15 297 1 320 300 88 35 chr2 151595315 151595485 -101661098 + MIR SINE MIR 47 225 -37 27 0 0 0 chr2 151595767 151595794 -101660789 + AT_rich Low_complexity Low_complexity 1 27 0 209 115 19 77 chr2 151595886 151595938 -101660645 + A-rich Low_complexity Low_complexity 2 50 0 288 313 0 0 chr2 151596180 151596295 -101660288 + A-rich Low_complexity Low_complexity 1 115 0 23 68 0 0 chr2 151596404 151596448 -101660135 + AT_rich Low_complexity Low_complexity 1 44 0 2019 181 10 37 chr2 151596584 151597030 -101659553 - MLT2B2 LTR ERVL -117 437 1 523 113 25 0 chr2 151597030 151597110 -101659473 - ERVL-B2 LTR ERVL -7 5757 5676 328 321 69 24 chr2 151597120 151597405 -101659178 + L2 LINE L2 2953 3303 -10 226 171 0 0 chr2 151598060 151598095 -101658488 - U2 snRNA snRNA -153 35 1 948 304 57 40 chr2 151598495 151599041 -101657542 + MLT1H1 LTR MaLR 1 555 0 24 0 0 0 chr2 151599503 151599527 -101657056 + AT_rich Low_complexity Low_complexity 1 24 0 332 308 179 22 chr2 151599915 151600139 -101656444 + MLT1J1 LTR MaLR 68 326 -120 21 0 0 0 chr2 151600171 151600192 -101656391 + AT_rich Low_complexity Low_complexity 1 21 0 587 298 50 5 chr2 151600249 151600447 -101656136 + MIR SINE MIR 56 262 0 385 365 88 28 chr2 151600916 151601313 -101655270 - L2 LINE L2 -339 2975 2555 182 320 107 0 chr2 151601411 151601533 -101655050 - L2 LINE L2 -926 2388 2254 319 225 168 46 chr2 151602137 151602310 -101654273 - L1ME4a LINE L1 -218 5903 5710 2161 176 5 16 chr2 151603137 151603518 -101653065 + MER89 LTR ERV1 183 559 0 441 305 69 0 chr2 151604385 151604516 -101652067 + MER5A DNA MER1_type 44 183 -6 967 279 56 16 chr2 151604531 151604854 -101651729 + MER58B DNA MER1_type 5 340 -1 297 339 73 11 chr2 151605153 151605330 -101651253 - MER5A DNA MER1_type 0 189 2 225 0 0 0 chr2 151606677 151606702 -101649881 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 259 327 88 44 chr2 151608181 151608340 -101648243 - MIR3 SINE MIR -27 181 16 28 29 0 0 chr2 151609394 151609429 -101647154 + AT_rich Low_complexity Low_complexity 1 35 0 201 147 0 0 chr2 151610183 151610217 -101646366 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 416 0 62 0 chr2 151612757 151612821 -101643762 + (TA)n Simple_repeat Simple_repeat 2 69 0 22 35 0 0 chr2 151612835 151612864 -101643719 + AT_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr2 151618041 151618076 -101638507 + AT_rich Low_complexity Low_complexity 1 35 0 617 82 0 0 chr2 151618836 151618921 -101637662 + AluSg/x SINE Alu 215 299 -10 2375 75 0 3 chr2 151619924 151620229 -101636354 - AluSc SINE Alu -5 304 1 360 0 0 0 chr2 151620404 151620444 -101636139 + (TG)n Simple_repeat Simple_repeat 2 41 0 992 188 82 24 chr2 151620473 151620681 -101635902 - AluJo SINE Alu -92 220 1 22 35 0 0 chr2 151621027 151621056 -101635527 + AT_rich Low_complexity Low_complexity 1 29 0 1199 199 23 19 chr2 151621124 151621390 -101635193 + AluJo SINE Alu 41 307 -5 22 0 0 0 chr2 151621468 151621490 -101635093 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 151621782 151621803 -101634780 + AT_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr2 151622422 151622458 -101634125 + AT_rich Low_complexity Low_complexity 1 36 0 252 0 0 0 chr2 151623322 151623350 -101633233 + (TG)n Simple_repeat Simple_repeat 2 29 0 22 56 0 0 chr2 151623620 151623656 -101632927 + AT_rich Low_complexity Low_complexity 1 36 0 2181 119 0 0 chr2 151624858 151625153 -101631430 - AluSc SINE Alu -14 295 1 264 77 0 0 chr2 151625573 151625612 -101630971 + (CA)n Simple_repeat Simple_repeat 1 39 0 800 284 45 36 chr2 151625622 151626054 -101630529 + LTR33 LTR ERVL 3 460 -61 976 273 0 10 chr2 151626633 151626937 -101629646 + L1M4 LINE L1 4940 5240 -906 746 217 44 52 chr2 151626931 151627180 -101629403 + L1MC2 LINE L1 6085 6331 -13 * 246 32 0 0 chr2 151628032 151628063 -101628520 + (TC)n Simple_repeat Simple_repeat 2 32 0 * 279 0 0 0 chr2 151628062 151628093 -101628490 + (TG)n Simple_repeat Simple_repeat 2 32 0 262 273 149 4 chr2 151628614 151628738 -101627845 - MIR3 SINE MIR -81 127 8 * 326 276 35 28 chr2 151628728 151628873 -101627710 + MER5B DNA MER1_type 28 173 -5 22 0 0 0 chr2 151629481 151629503 -101627080 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr2 151632382 151632406 -101624177 + AT_rich Low_complexity Low_complexity 1 24 0 257 345 11 0 chr2 151632516 151632603 -101623980 - MARNA DNA Mariner -410 176 89 * 267 330 31 0 chr2 151632526 151632623 -101623960 + MARNA DNA Mariner 419 518 -68 180 299 37 37 chr2 151633783 151633890 -101622693 + L2 LINE L2 1878 1984 -1330 7150 148 37 9 chr2 151634942 151637231 -101619352 - Tigger1 DNA MER2_type 0 2418 2 275 247 0 12 chr2 151637231 151637312 -101619271 + (TA)n Simple_repeat Simple_repeat 2 81 0 31 44 0 0 chr2 151637788 151637833 -101618750 + AT_rich Low_complexity Low_complexity 1 45 0 414 290 151 11 chr2 151638293 151638479 -101618104 + L2 LINE L2 2241 2452 -862 2283 94 0 3 chr2 151638527 151638835 -101617748 + AluSq SINE Alu 1 307 -6 225 0 0 0 chr2 151639034 151639059 -101617524 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 235 242 91 0 chr2 151639291 151639357 -101617226 + MLT1K LTR MaLR 374 445 -143 1240 229 81 8 chr2 151639500 151639893 -101616690 - Zaphod DNA AcHobo -9 4022 3601 1922 248 55 65 chr2 151639897 151640067 -101616516 - Zaphod DNA AcHobo -3041 990 820 1623 182 3 3 chr2 151640067 151640358 -101616225 + AluSx SINE Alu 1 291 -21 1922 248 55 65 chr2 151640358 151640518 -101616065 - Zaphod DNA AcHobo -3211 820 660 1775 164 17 3 chr2 151640518 151640816 -101615767 + AluJb SINE Alu 1 302 -10 1922 248 55 65 chr2 151640816 151641434 -101615149 - Zaphod DNA AcHobo -3371 660 51 240 329 41 0 chr2 151641642 151641715 -101614868 - MIR SINE MIR -186 76 1 1346 86 15 45 chr2 151642859 151643057 -101613526 + AluSp SINE Alu 6 197 -116 1164 128 0 0 chr2 151643058 151643242 -101613341 + AluSp SINE Alu 127 310 0 21 0 0 0 chr2 151643580 151643601 -101612982 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 151644279 151644307 -101612276 + AT_rich Low_complexity Low_complexity 1 28 0 1201 206 31 108 chr2 151645623 151646034 -101610549 - MLT1A2 LTR MaLR 0 374 1 24 53 0 0 chr2 151646172 151646210 -101610373 + AT_rich Low_complexity Low_complexity 1 38 0 1175 230 4 8 chr2 151646635 151646874 -101609709 - MER8 DNA MER2_type 0 239 2 228 284 30 15 chr2 151648556 151648623 -101607960 + MER91C DNA MER1_type 17 84 -56 203 189 0 0 chr2 151649185 151649222 -101607361 + A-rich Low_complexity Low_complexity 1 37 0 234 156 0 0 chr2 151650345 151650390 -101606193 + (TA)n Simple_repeat Simple_repeat 1 45 0 3011 93 23 0 chr2 151651064 151651492 -101605091 - L1PA7 LINE L1 -4 6150 5713 33 25 0 0 chr2 151651752 151651792 -101604791 + AT_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr2 151652808 151652830 -101603753 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 151654266 151654288 -101602295 + AT_rich Low_complexity Low_complexity 1 22 0 26 30 0 0 chr2 151656120 151656153 -101600430 + AT_rich Low_complexity Low_complexity 1 33 0 685 254 124 42 chr2 151656667 151657049 -101599534 - L1ME1 LINE L1 -9 6224 5828 1589 257 123 40 chr2 151657082 151657186 -101599397 - L1ME1 LINE L1 -1052 5163 5069 372 43 0 0 chr2 151657186 151657232 -101599351 + (TG)n Simple_repeat Simple_repeat 1 46 0 1589 257 123 40 chr2 151657232 151658065 -101598518 - L1ME1 LINE L1 -1146 5069 4149 988 277 46 24 chr2 151658101 151659085 -101597498 - L1ME1 LINE L1 -3362 2853 1851 34 0 0 0 chr2 151659096 151659130 -101597453 + AT_rich Low_complexity Low_complexity 1 34 0 3786 58 8 0 chr2 151659438 151659924 -101596659 + L1PA6 LINE L1 5664 6153 -1 403 330 58 40 chr2 151660066 151660472 -101596111 + L1MEd LINE L1 1078 1528 -4782 1239 130 126 22 chr2 151660506 151660729 -101595854 - LTR28 LTR ERV1 -774 246 1 * 1748 229 17 20 chr2 151660729 151661134 -101595449 - MLT1C LTR MaLR -31 436 33 6278 228 71 82 chr2 151661774 151664919 -101591664 - L1MA2 LINE L1 0 6373 3195 1111 209 28 100 chr2 151664919 151665240 -101591343 - AluJb SINE Alu -3 299 2 1679 173 7 3 chr2 151665241 151665536 -101591047 - AluJo SINE Alu -16 296 1 6278 228 71 82 chr2 151665536 151666834 -101589749 - L1MA2 LINE L1 -3177 3196 2018 525 312 63 11 chr2 151666825 151667187 -101589396 - L1MCa LINE L1 -4440 2167 1787 * 11833 236 51 31 chr2 151667192 151667655 -101588928 - L1MA9 LINE L1 -5 6371 5919 207 0 0 0 chr2 151667655 151667678 -101588905 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 11833 236 51 31 chr2 151667678 151667707 -101588876 - L1MA9 LINE L1 -457 5919 5892 252 59 0 0 chr2 151667707 151667741 -101588842 + (TAGA)n Simple_repeat Simple_repeat 1 34 0 11833 236 51 31 chr2 151667741 151670535 -101586048 - L1MA9 LINE L1 -484 5892 3157 1951 156 3 3 chr2 151670535 151670843 -101585740 - AluSx SINE Alu -4 308 1 11833 236 51 31 chr2 151670843 151670890 -101585693 - L1MA9 LINE L1 -3219 3157 3112 204 40 0 0 chr2 151670890 151670915 -101585668 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 11833 236 51 31 chr2 151670915 151672662 -101583921 - L1MA9 LINE L1 -3264 3112 1321 1106 205 8 4 chr2 151672662 151672896 -101583687 - MER46A DNA MER2_type -1 235 1 11833 236 51 31 chr2 151672896 151674223 -101582360 - L1MA9 LINE L1 -5055 1321 23 891 296 56 29 chr2 151674240 151674902 -101581681 - L1MCa LINE L1 -4828 1598 919 700 256 35 13 chr2 151676502 151676732 -101579851 - MER106A DNA MER1_type -1 235 1 248 278 0 14 chr2 151676987 151677059 -101579524 + (TA)n Simple_repeat Simple_repeat 2 72 0 246 326 0 0 chr2 151677059 151677148 -101579435 - L1MC4 LINE L1 -1339 6703 6615 411 173 0 0 chr2 151677149 151677230 -101579353 + (TA)n Simple_repeat Simple_repeat 2 82 0 355 311 0 0 chr2 151678398 151678504 -101578079 - MLT1F1 LTR MaLR -461 106 1 481 248 18 18 chr2 151678558 151678671 -101577912 + MER81 DNA DNA 2 114 0 2052 96 6 43 chr2 151679825 151680147 -101576436 + AluSx SINE Alu 1 310 -2 362 292 125 24 chr2 151680290 151680458 -101576125 - MIR SINE MIR 0 262 78 1505 72 0 26 chr2 151680570 151680764 -101575819 - AluY SINE Alu -122 189 1 941 240 116 45 chr2 151681302 151681639 -101574944 - MLT1A1 LTR MaLR 0 365 5 944 176 0 0 chr2 151682103 151682256 -101574327 - AluJb SINE Alu -8 304 152 245 261 127 91 chr2 151682327 151682492 -101574091 - MIR SINE MIR -13 249 79 186 43 0 0 chr2 151682658 151682681 -101573902 + (TG)n Simple_repeat Simple_repeat 2 24 0 2434 64 0 0 chr2 151683961 151684259 -101572324 - AluY SINE Alu -13 298 1 232 393 47 7 chr2 151684785 151684935 -101571648 + L2 LINE L2 3116 3271 -1 22 35 0 0 chr2 151686177 151686206 -101570377 + AT_rich Low_complexity Low_complexity 1 29 0 1534 219 10 0 chr2 151686480 151686782 -101569801 - AluJb SINE Alu -7 305 1 3030 183 14 72 chr2 151688017 151688751 -101567832 + LTR8 LTR ERV1 1 691 0 2090 191 0 13 chr2 151688751 151689128 -101567455 + HUERS-P1 LTR ERV1 1 372 -5891 2016 161 21 29 chr2 151689204 151689588 -101566995 + LTR8 LTR ERV1 311 691 0 422 316 111 0 chr2 151689999 151690170 -101566413 - MIR SINE MIR -19 243 54 532 335 11 0 chr2 151692871 151693050 -101563533 + MIR SINE MIR 82 262 0 684 175 0 0 chr2 151693171 151693285 -101563298 + FLAM_C SINE Alu 6 119 -24 186 306 0 0 chr2 151693397 151693446 -101563137 - L2 LINE L2 -672 2642 2594 208 365 74 41 chr2 151693545 151693789 -101562794 - L2 LINE L2 -864 2450 2199 1927 142 16 7 chr2 151694003 151694312 -101562271 + AluSx SINE Alu 1 312 0 320 315 22 55 chr2 151694610 151694791 -101561792 + HAL1b LINE L1 760 934 -414 26 0 0 0 chr2 151695223 151695249 -101561334 + AT_rich Low_complexity Low_complexity 1 26 0 289 283 43 0 chr2 151695729 151695821 -101560762 + HAL1 LINE L1 1303 1398 -1109 22 0 0 0 chr2 151695853 151695875 -101560708 + AT_rich Low_complexity Low_complexity 1 22 0 233 321 95 53 chr2 151695880 151696142 -101560441 + HAL1 LINE L1 1505 1777 -730 1484 167 31 133 chr2 151697132 151697825 -101558758 - MER4A LTR ERV1 0 465 1 417 361 36 12 chr2 151697907 151698073 -101558510 + MIR SINE MIR 25 194 -68 28 29 0 0 chr2 151699249 151699284 -101557299 + AT_rich Low_complexity Low_complexity 1 35 0 221 289 69 67 chr2 151700865 151701012 -101555571 - MIR SINE MIR -66 142 41 465 334 60 30 chr2 151701204 151701569 -101555014 - L1ME LINE L1 -5283 787 412 305 363 98 26 chr2 151701588 151701822 -101554761 - L1ME LINE L1 -5580 490 240 1466 164 212 19 chr2 151702301 151702660 -101553923 - MSTA LTR MaLR 0 428 1 409 312 77 0 chr2 151703185 151703355 -101553228 - L3b LINE CR1 -270 1313 1131 196 297 81 27 chr2 151704675 151704749 -101551834 + L2 LINE L2 3157 3234 -38 324 48 0 0 chr2 151705289 151705331 -101551252 + (A)n Simple_repeat Simple_repeat 1 42 0 194 269 164 0 chr2 151705632 151705699 -101550884 + L2 LINE L2 3195 3272 0 2002 126 27 7 chr2 151706077 151706370 -101550213 - AluSq SINE Alu -14 299 1 398 254 127 86 chr2 151706674 151706918 -101549665 - MIR SINE MIR 0 262 9 1769 123 8 4 chr2 151707417 151707670 -101548913 - AluSq SINE Alu -59 254 1 240 143 0 0 chr2 151707683 151707725 -101548858 + (T)n Simple_repeat Simple_repeat 1 42 0 2000 132 10 0 chr2 151707727 151708037 -101548546 - AluSp SINE Alu 0 313 1 279 378 63 0 chr2 151708354 151708465 -101548118 + L2 LINE L2 3150 3267 -5 317 242 32 0 chr2 151708468 151708563 -101548020 + GA-rich Low_complexity Low_complexity 3 100 0 1681 322 117 23 chr2 151709344 151710356 -101546227 - L2 LINE L2 -94 3219 2095 267 104 30 15 chr2 151710850 151710917 -101545666 + (TAGA)n Simple_repeat Simple_repeat 3 70 0 23 33 0 0 chr2 151711241 151711271 -101545312 + AT_rich Low_complexity Low_complexity 1 30 0 182 300 56 33 chr2 151713143 151713233 -101543350 + MIR3 SINE MIR 112 203 -5 181 261 0 0 chr2 151716814 151716860 -101539723 - MIR3 SINE MIR -3 205 160 402 264 182 7 chr2 151718278 151718364 -101538219 + MIR SINE MIR 45 115 -147 224 57 0 29 chr2 151718364 151718399 -101538184 + (TA)n Simple_repeat Simple_repeat 2 35 0 2036 130 7 3 chr2 151718404 151718704 -101537879 - AluSq SINE Alu -12 301 1 402 264 182 7 chr2 151718704 151718797 -101537786 + MIR SINE MIR 118 262 0 422 340 25 15 chr2 151718934 151719131 -101537452 + MLT1K LTR MaLR 79 277 -311 424 270 138 15 chr2 151719506 151719702 -101536881 + MLT1K LTR MaLR 369 588 0 380 251 197 49 chr2 151719863 151720046 -101536537 + MIR SINE MIR 50 259 -3 29 0 0 0 chr2 151720108 151720137 -101536446 + AT_rich Low_complexity Low_complexity 1 29 0 309 51 0 0 chr2 151723913 151723952 -101532631 + (CA)n Simple_repeat Simple_repeat 1 39 0 21 0 0 0 chr2 151724023 151724044 -101532539 + AT_rich Low_complexity Low_complexity 1 21 0 274 322 35 35 chr2 151724857 151724972 -101531611 - MIR SINE MIR -110 152 38 26 30 0 0 chr2 151725356 151725389 -101531194 + AT_rich Low_complexity Low_complexity 1 33 0 202 337 30 30 chr2 151725894 151725995 -101530588 + MER5B DNA MER1_type 78 178 0 21 0 0 0 chr2 151726042 151726063 -101530520 + AT_rich Low_complexity Low_complexity 1 21 0 338 289 0 0 chr2 151726265 151726341 -101530242 + L2 LINE L2 3186 3261 -11 506 284 82 16 chr2 151727146 151727329 -101529254 + MIR SINE MIR 58 252 -10 1560 181 26 16 chr2 151727824 151728127 -101528456 - AluJb SINE Alu -6 306 1 25 0 0 0 chr2 151728360 151728385 -101528198 + AT_rich Low_complexity Low_complexity 1 25 0 621 216 37 25 chr2 151730632 151730794 -101525789 + MER20 DNA MER1_type 56 219 0 946 266 25 5 chr2 151732617 151732850 -101523733 + MIR SINE MIR 6 235 -27 22 35 0 0 chr2 151734468 151734497 -101522086 + AT_rich Low_complexity Low_complexity 1 29 0 1629 210 10 0 chr2 151734777 151735086 -101521497 - AluJb SINE Alu 0 312 1 424 320 110 33 chr2 151736001 151736366 -101520217 + L2 LINE L2 2186 2578 -736 900 328 70 12 chr2 151736368 151736798 -101519785 - LTR33 LTR ERVL -1 520 66 286 307 29 57 chr2 151736803 151736943 -101519640 + L2 LINE L2 2603 2738 -576 312 289 158 0 chr2 151737033 151737147 -101519436 + L2 LINE L2 3141 3272 0 199 107 0 0 chr2 151737168 151737196 -101519387 - MER5B DNA MER1_type -126 52 25 24 85 0 0 chr2 151737899 151737958 -101518625 + AT_rich Low_complexity Low_complexity 1 59 0 236 279 0 0 chr2 151738056 151738124 -101518459 + (TA)n Simple_repeat Simple_repeat 2 69 0 22 56 0 0 chr2 151739210 151739246 -101517337 + AT_rich Low_complexity Low_complexity 1 36 0 296 267 109 10 chr2 151741803 151741904 -101514679 - MIR SINE MIR 0 262 152 1822 174 93 13 chr2 151741904 151742544 -101514039 - LTR8A LTR ERV1 0 727 1 402 191 36 64 chr2 151742544 151742654 -101513929 - MIR SINE MIR -107 155 49 23 78 0 0 chr2 151742886 151742937 -101513646 + AT_rich Low_complexity Low_complexity 1 51 0 31 0 0 0 chr2 151743595 151743626 -101512957 + AT_rich Low_complexity Low_complexity 1 31 0 3168 253 124 61 chr2 151743917 151745691 -101510892 - L1MEc LINE L1 -4466 1930 45 270 261 25 109 chr2 151745720 151745839 -101510744 - MIR SINE MIR -13 249 141 235 270 14 14 chr2 151745840 151745914 -101510669 + MLT1L LTR MaLR 3 76 -539 36583 96 12 8 chr2 151746340 151751614 -101504969 + L1P LINE L1 11 5305 -841 24400 72 12 1 chr2 151751739 151755804 -101500779 + L1PA6 LINE L1 2040 6147 -7 1553 291 51 31 chr2 151757430 151757979 -101498604 + MER69 DNA AcHobo 1 560 -1966 358 221 82 0 chr2 151757982 151758104 -101498479 + MER69 DNA AcHobo 2061 2192 -334 669 177 23 51 chr2 151758129 151758344 -101498239 + MER69 DNA AcHobo 2309 2517 -9 25 75 0 0 chr2 151759102 151759155 -101497428 + AT_rich Low_complexity Low_complexity 1 53 0 418 255 9 9 chr2 151761038 151761144 -101495439 + MIR SINE MIR 87 192 -70 255 157 0 0 chr2 151761306 151761357 -101495226 + (TA)n Simple_repeat Simple_repeat 2 52 0 794 205 0 13 chr2 151761684 151761835 -101494748 - FRAM SINE Alu -27 149 1 186 43 0 0 chr2 151761883 151761906 -101494677 + (TA)n Simple_repeat Simple_repeat 1 23 0 22 35 0 0 chr2 151764655 151764684 -101491899 + AT_rich Low_complexity Low_complexity 1 29 0 2228 219 51 21 chr2 151764894 151765427 -101491156 - MER44D DNA MER2_type -1 604 1 1789 256 59 24 chr2 151765558 151766104 -101490479 + MLT1E2 LTR MaLR 60 624 -2 222 205 0 0 chr2 151766135 151766174 -101490409 + (CA)n Simple_repeat Simple_repeat 2 40 0 1803 166 0 25 chr2 151766249 151766563 -101490020 + AluJo SINE Alu 6 311 -1 379 139 13 13 chr2 151766566 151766645 -101489938 + GA-rich Low_complexity Low_complexity 2 80 0 186 186 102 0 chr2 151766727 151766786 -101489797 + MIR SINE MIR 126 190 -72 353 281 14 36 chr2 151766954 151767093 -101489490 + MER5A DNA MER1_type 32 167 -22 22 0 0 0 chr2 151769003 151769025 -101487558 + AT_rich Low_complexity Low_complexity 1 22 0 281 208 14 0 chr2 151769138 151769210 -101487373 + (CATA)n Simple_repeat Simple_repeat 3 75 0 1591 165 133 3 chr2 151769224 151769540 -101487043 - MLT2C1 LTR ERVL -40 357 1 26 50 0 0 chr2 151770375 151770415 -101486168 + AT_rich Low_complexity Low_complexity 1 40 0 2467 62 0 7 chr2 151770483 151770790 -101485793 + AluY SINE Alu 1 305 -6 194 399 49 14 chr2 151771010 151771153 -101485430 - MIR SINE MIR -92 170 23 949 188 10 43 chr2 151772261 151772469 -101484114 + MER20 DNA MER1_type 16 216 -3 230 95 24 0 chr2 151773499 151773541 -101483042 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 200 297 54 14 chr2 151773924 151773998 -101482585 + MIR SINE MIR 54 130 -78 861 248 174 119 chr2 151774910 151775567 -101481016 + MER21B LTR ERV1 22 714 -149 231 88 0 0 chr2 151778359 151778393 -101478190 + (TCTA)n Simple_repeat Simple_repeat 4 37 0 256 187 27 13 chr2 151778393 151778468 -101478115 + (TA)n Simple_repeat Simple_repeat 2 77 0 505 150 20 0 chr2 151783115 151783215 -101473368 + GA-rich Low_complexity Low_complexity 2 103 0 21 0 0 0 chr2 151783776 151783797 -101472786 + AT_rich Low_complexity Low_complexity 1 21 0 3447 121 0 15 chr2 151784962 151785484 -101471099 - MER75 DNA T2_type 0 514 1 24 0 0 0 chr2 151785831 151785855 -101470728 + AT_rich Low_complexity Low_complexity 1 24 0 905 185 11 4 chr2 151786456 151786902 -101469681 + CT-rich Low_complexity Low_complexity 1 449 0 337 309 64 54 chr2 151787230 151787434 -101469149 - MIR SINE MIR 0 262 57 1154 268 97 41 chr2 151787726 151788343 -101468240 + L2 LINE L2 2428 3133 -180 987 226 42 9 chr2 151788343 151788560 -101468023 + MER58A DNA MER1_type 1 224 0 1154 268 97 41 chr2 151788560 151788751 -101467832 + L2 LINE L2 3133 3312 -1 225 327 99 8 chr2 151789162 151789334 -101467249 + MIR SINE MIR 20 251 -11 661 286 27 45 chr2 151789512 151789732 -101466851 + MIR SINE MIR 28 243 -19 273 75 0 0 chr2 151789936 151789976 -101466607 + (CA)n Simple_repeat Simple_repeat 2 41 0 545 246 8 0 chr2 151791008 151791142 -101465441 + MER104 DNA Tc2 40 174 -6 23 39 0 39 chr2 151792181 151792206 -101464377 + AT_rich Low_complexity Low_complexity 1 25 -25 2466 162 19 7 chr2 151792206 151792625 -101463958 - MSTB LTR MaLR -2 424 1 23 39 0 39 chr2 151792625 151792651 -101463932 + AT_rich Low_complexity Low_complexity 25 50 0 2057 135 0 3 chr2 151793159 151793470 -101463113 - AluSx SINE Alu -2 310 1 932 152 0 6 chr2 151794696 151794867 -101461716 + CT-rich Low_complexity Low_complexity 2 171 0 1668 159 0 18 chr2 151796317 151796600 -101459983 + AluJb SINE Alu 26 303 -9 2394 73 0 10 chr2 151796667 151796968 -101459615 + AluY SINE Alu 1 298 -13 426 311 30 54 chr2 151797152 151797547 -101459036 + L1MCa LINE L1 33 737 -5685 673 289 148 21 chr2 151797951 151798283 -101458300 + L1MCa LINE L1 920 1293 -5130 1168 248 16 82 chr2 151798325 151798901 -101457682 + L1MCa LINE L1 1376 1913 -5028 440 131 71 12 chr2 151798976 151799144 -101457439 + (TATAA)n Simple_repeat Simple_repeat 1 178 0 469 101 38 44 chr2 151799198 151799356 -101457227 + (TTATA)n Simple_repeat Simple_repeat 3 159 0 1014 276 75 27 chr2 151799465 151800092 -101456491 + L1MCa LINE L1 2299 2955 -4167 229 325 167 17 chr2 151800305 151800334 -101456249 - L2 LINE L2 -2 3270 3247 1979 101 6 76 chr2 151800334 151800651 -101455932 - AluSx SINE Alu -17 295 1 229 325 167 17 chr2 151800651 151800741 -101455842 - L2 LINE L2 -25 3247 3133 507 249 109 0 chr2 151801481 151801646 -101454937 - L2 LINE L2 -5 3308 3126 26 0 0 0 chr2 151802072 151802098 -101454485 + AT_rich Low_complexity Low_complexity 1 26 0 3622 162 30 47 chr2 151802102 151802512 -101454071 - L1MA5A LINE L1 -63 6234 5843 1473 196 11 7 chr2 151802512 151802798 -101453785 - AluJo SINE Alu -15 297 11 3622 162 30 47 chr2 151802798 151803190 -101453393 - L1MA5A LINE L1 -454 5843 5446 271 305 124 9 chr2 151803380 151803485 -101453098 + L2 LINE L2 3189 3305 -8 21 71 0 0 chr2 151803651 151803693 -101452890 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr2 151804124 151804147 -101452436 + AT_rich Low_complexity Low_complexity 1 23 0 206 154 0 26 chr2 151804953 151804992 -101451591 + CT-rich Low_complexity Low_complexity 2 39 0 270 0 0 0 chr2 151805989 151806019 -101450564 + (CA)n Simple_repeat Simple_repeat 1 30 0 331 284 65 18 chr2 151806110 151806279 -101450304 + MLT1L LTR MaLR 439 615 0 232 143 0 0 chr2 151806394 151806436 -101450147 + L1ME LINE L1 5698 5739 -423 621 285 186 16 chr2 151806501 151806887 -101449696 + L1MC4 LINE L1 7301 7752 -290 231 61 0 0 chr2 151807017 151807050 -101449533 + (CA)n Simple_repeat Simple_repeat 2 34 0 2519 66 0 0 chr2 151807227 151807531 -101449052 - AluY SINE Alu -7 304 1 24 0 0 0 chr2 151807662 151807686 -101448897 + AT_rich Low_complexity Low_complexity 1 24 0 287 292 90 38 chr2 151810635 151810768 -101445815 + MIR3 SINE MIR 13 154 -73 502 182 73 0 chr2 151810997 151811107 -101445476 + MLT2B2 LTR ERVL 1 118 -397 1612 214 89 46 chr2 151811127 151811566 -101445017 + MLT2B1 LTR ERVL 61 518 -2 203 392 25 38 chr2 151814061 151814219 -101442364 - MIR3 SINE MIR -38 170 15 530 313 71 12 chr2 151816153 151816398 -101440185 - L1ME LINE L1 -400 5721 5456 227 79 26 0 chr2 151817971 151818009 -101438574 + (TA)n Simple_repeat Simple_repeat 2 40 0 208 313 0 0 chr2 151818024 151818104 -101438479 + (TATATG)n Simple_repeat Simple_repeat 5 84 0 261 382 27 48 chr2 151819874 151820060 -101436523 - MIR3 SINE MIR -12 196 15 26 0 0 0 chr2 151820427 151820453 -101436130 + AT_rich Low_complexity Low_complexity 1 26 0 632 258 6 39 chr2 151820857 151821039 -101435544 - MER5B DNA MER1_type -2 176 1 1504 164 16 56 chr2 151821173 151821478 -101435105 + AluJb SINE Alu 1 293 -19 4266 92 15 40 chr2 151821587 151822118 -101434465 + MER41B LTR ERV1 1 515 -120 2192 123 3 0 chr2 151822118 151822428 -101434155 - AluY SINE Alu 0 311 1 4266 92 15 40 chr2 151822428 151822547 -101434036 + MER41B LTR ERV1 515 635 0 24 0 0 0 chr2 151824451 151824475 -101432108 + AT_rich Low_complexity Low_complexity 1 24 0 844 301 103 28 chr2 151825312 151825748 -101430835 + L2 LINE L2 2827 3295 -18 225 94 0 0 chr2 151825751 151825783 -101430800 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 2065 81 7 42 chr2 151825856 151826178 -101430405 + AluSg SINE Alu 8 319 0 2246 95 10 0 chr2 151826271 151826566 -101430017 - AluSp SINE Alu -15 298 1 23 54 0 0 chr2 151826681 151826718 -101429865 + AT_rich Low_complexity Low_complexity 1 37 0 192 375 0 14 chr2 151828378 151828450 -101428133 - MIR SINE MIR -90 118 48 573 313 216 8 chr2 151830020 151830404 -101426179 + L2 LINE L2 1798 2261 -1053 506 310 44 0 chr2 151830419 151830577 -101426006 + MIR3 SINE MIR 35 199 -9 24 77 0 0 chr2 151831435 151831487 -101425096 + AT_rich Low_complexity Low_complexity 1 52 0 23 33 0 0 chr2 151831914 151831944 -101424639 + AT_rich Low_complexity Low_complexity 1 30 0 1188 209 40 80 chr2 151833021 151833394 -101423189 + MLT1A2 LTR MaLR 1 358 -16 535 299 65 14 chr2 151834984 151835201 -101421382 + MIR SINE MIR 3 230 -32 790 278 106 61 chr2 151835276 151835766 -101420817 - MLT1H LTR MaLR 0 549 38 422 206 24 129 chr2 151837780 151837950 -101418633 + MIR SINE MIR 110 261 -1 24 0 0 0 chr2 151838753 151838777 -101417806 + AT_rich Low_complexity Low_complexity 1 24 0 858 265 153 43 chr2 151839174 151839709 -101416874 - MLT1G1 LTR MaLR 0 595 2 693 231 116 20 chr2 151841005 151841204 -101415379 + MER20 DNA MER1_type 1 218 -1 324 299 30 102 chr2 151844194 151844361 -101412222 - L2 LINE L2 -21 3251 3097 205 322 70 26 chr2 151844993 151845108 -101411475 - L2 LINE L2 -483 2831 2712 2006 187 65 7 chr2 151845732 151846144 -101410439 - MER39 LTR ERV1 -16 691 256 317 175 52 103 chr2 151846116 151846213 -101410370 - MER39B LTR ERV1 -561 92 1 * 180 0 0 0 chr2 151846284 151846304 -101410279 + (TG)n Simple_repeat Simple_repeat 2 21 0 21 36 0 0 chr2 151846587 151846615 -101409968 + AT_rich Low_complexity Low_complexity 1 28 0 281 300 33 0 chr2 151846714 151846804 -101409779 + LTR33 LTR ERVL 1 93 -428 208 121 0 0 chr2 151846810 151846843 -101409740 + (TTG)n Simple_repeat Simple_repeat 2 34 0 227 318 57 0 chr2 151846974 151847062 -101409521 + LTR33A LTR ERVL 304 396 -127 786 227 21 21 chr2 151847129 151847323 -101409260 - MLT1A1 LTR MaLR -4 361 168 276 252 0 58 chr2 151847321 151847482 -101409101 - MSTC LTR MaLR -169 196 49 * 3643 123 72 81 chr2 151847482 151848854 -101407729 - pTR5 LTR ERV1 -12 2426 66 50 0 0 0 chr2 151849050 151849100 -101407483 + AT_rich Low_complexity Low_complexity 1 50 0 22 35 0 0 chr2 151849948 151849977 -101406606 + AT_rich Low_complexity Low_complexity 1 29 0 1903 169 80 20 chr2 151851050 151851452 -101405131 + MSTA LTR MaLR 3 428 0 700 170 106 0 chr2 151851687 151851828 -101404755 - MER3 DNA MER1_type -53 156 1 294 298 16 32 chr2 151851828 151851952 -101404631 - HERV16 LTR ERVL -798 4856 4735 1881 354 65 19 chr2 151852217 151853788 -101402795 - HERV16 LTR ERVL -1259 4395 2717 1416 322 96 46 chr2 151853794 151855997 -101400586 - HERV16 LTR ERVL -2361 2635 317 627 216 98 7 chr2 151856079 151856232 -101400351 - MER20 DNA MER1_type -3 216 50 24 32 0 0 chr2 151856352 151856383 -101400200 + AT_rich Low_complexity Low_complexity 1 31 0 648 262 29 35 chr2 151856818 151856990 -101399593 + MER5B DNA MER1_type 1 171 -7 618 182 30 36 chr2 151857426 151857593 -101398990 - MER31B LTR ERV1 -188 278 1 185 297 62 55 chr2 151857605 151857634 -101398949 - L2 LINE L2 -633 2681 2654 2470 56 0 13 chr2 151857634 151857940 -101398643 + AluY SINE Alu 4 305 -6 185 297 62 55 chr2 151857940 151858038 -101398545 - L2 LINE L2 -660 2654 2553 287 235 71 130 chr2 151858092 151858330 -101398253 - L2 LINE L2 -13 3300 3077 826 294 61 71 chr2 151858378 151858688 -101397895 - L2 LINE L2 -976 2338 2031 1669 110 5 0 chr2 151858688 151858907 -101397676 + AluSp SINE Alu 37 256 -57 826 294 61 71 chr2 151858907 151859007 -101397576 - L2 LINE L2 -1283 2031 1932 4277 189 54 62 chr2 151859154 151860359 -101396224 + MER45R DNA AcHobo 243 1437 -144 218 92 10 102 chr2 151860411 151860607 -101395976 + (TA)n Simple_repeat Simple_repeat 2 179 0 1384 188 4 52 chr2 151860622 151860894 -101395689 - AluJo SINE Alu -51 261 3 596 188 19 52 chr2 151860897 151861051 -101395532 + MER45R DNA AcHobo 1433 1581 0 1643 174 28 51 chr2 151861834 151862224 -101394359 - MLT1B LTR MaLR -1 389 9 276 91 0 0 chr2 151862516 151862560 -101394023 + (CA)n Simple_repeat Simple_repeat 2 45 0 22 56 0 0 chr2 151863504 151863540 -101393043 + AT_rich Low_complexity Low_complexity 1 36 0 226 147 0 0 chr2 151863622 151863656 -101392927 + (T)n Simple_repeat Simple_repeat 1 34 0 405 58 0 0 chr2 151863656 151863708 -101392875 + (TTCC)n Simple_repeat Simple_repeat 1 52 0 1654 161 3 18 chr2 151863708 151863993 -101392590 - AluJo SINE Alu -31 281 1 199 296 28 0 chr2 151864317 151864388 -101392195 + MIR SINE MIR 58 130 -78 266 329 59 18 chr2 151864481 151864651 -101391932 + MLT1I LTR MaLR 9 185 -224 772 184 71 6 chr2 151865336 151865504 -101391079 + MER3 DNA MER1_type 29 207 -2 243 0 0 0 chr2 151865768 151865795 -101390788 + (ATG)n Simple_repeat Simple_repeat 2 28 0 1917 133 14 0 chr2 151865809 151866088 -101390495 - AluSc SINE Alu -26 283 1 28 0 0 0 chr2 151866097 151866125 -101390458 + AT_rich Low_complexity Low_complexity 1 28 0 338 231 0 0 chr2 151866285 151866350 -101390233 + MLT1I LTR MaLR 345 409 0 25 51 0 0 chr2 151866451 151866490 -101390093 + AT_rich Low_complexity Low_complexity 1 39 0 2083 160 25 6 chr2 151867107 151867464 -101389119 + THE1B LTR MaLR 1 364 0 8938 112 40 38 chr2 151867467 151868879 -101387704 + THE1B-int LTR MaLR 2 1415 -165 207 175 32 32 chr2 151869011 151869074 -101387509 + CT-rich Low_complexity Low_complexity 2 64 0 23 0 0 0 chr2 151870077 151870100 -101386483 + AT_rich Low_complexity Low_complexity 1 23 0 329 250 18 22 chr2 151870350 151870464 -101386119 + L1MC4 LINE L1 6614 6703 -1339 756 272 34 36 chr2 151870809 151871224 -101385359 + THE1-int LTR MaLR 1004 1417 -163 1103 227 95 117 chr2 151871353 151872089 -101384494 + LTR8A LTR ERV1 1 720 -7 218 273 72 36 chr2 151872474 151872613 -101383970 - MIR SINE MIR -44 218 75 2090 250 82 24 chr2 151872896 151874179 -101382404 - L1ME3 LINE L1 -130 6032 4662 1228 278 78 27 chr2 151874637 151875047 -101381536 + L1MDb LINE L1 143 573 -5970 1996 243 72 16 chr2 151875048 151876154 -101380429 + L1MDb LINE L1 2085 3253 -3287 2586 209 54 19 chr2 151876154 151876574 -101380009 + L1MD2 LINE L1 5715 6164 -195 186 103 0 0 chr2 151876574 151876603 -101379980 + (CA)n Simple_repeat Simple_repeat 2 30 0 2586 209 54 19 chr2 151876603 151876798 -101379785 + L1MD2 LINE L1 6164 6351 -8 219 69 0 0 chr2 151877397 151877426 -101379157 + (CA)n Simple_repeat Simple_repeat 2 30 0 1982 109 26 23 chr2 151879381 151879683 -101376900 - AluSc SINE Alu -6 303 1 24 0 0 0 chr2 151879748 151879772 -101376811 + AT_rich Low_complexity Low_complexity 1 24 0 182 304 0 128 chr2 151880948 151881050 -101375533 + MIR SINE MIR 50 138 -70 53 40 0 0 chr2 151881827 151881901 -101374682 + AT_rich Low_complexity Low_complexity 1 74 0 21 57 0 0 chr2 151881967 151882002 -101374581 + AT_rich Low_complexity Low_complexity 1 35 0 254 241 11 0 chr2 151884032 151884119 -101372464 + (TA)n Simple_repeat Simple_repeat 2 89 0 23 0 0 0 chr2 151884202 151884225 -101372358 + AT_rich Low_complexity Low_complexity 1 23 0 1912 150 0 3 chr2 151884237 151884544 -101372039 + AluSx SINE Alu 1 306 -6 180 308 92 50 chr2 151884941 151885061 -101371522 + MIR SINE MIR 19 143 -65 3046 88 12 0 chr2 151885282 151885703 -101370880 - L1PA8 LINE L1 0 6172 5747 498 223 5 136 chr2 151886825 151887009 -101369574 - MER5A DNA MER1_type -21 168 9 229 323 158 39 chr2 151889397 151889682 -101366901 - L2 LINE L2 0 3313 2995 22 35 0 0 chr2 151889814 151889843 -101366740 + AT_rich Low_complexity Low_complexity 1 29 0 1657 173 89 3 chr2 151889880 151890239 -101366344 + MLT1B LTR MaLR 1 390 0 394 301 49 88 chr2 151890864 151891170 -101365413 + MLT1I LTR MaLR 90 383 -26 1187 136 22 0 chr2 151891741 151891925 -101364658 + MER30 DNA MER1_type 42 229 -1 23 0 0 0 chr2 151891944 151891967 -101364616 + AT_rich Low_complexity Low_complexity 1 23 0 1763 171 7 7 chr2 151893103 151893412 -101363171 - AluJb SINE Alu -2 310 2 201 167 0 0 chr2 151894517 151894553 -101362030 + T-rich Low_complexity Low_complexity 1 36 0 301 313 79 54 chr2 151895222 151895462 -101361121 + Charlie8 DNA MER1_type 27 272 -2145 1427 186 32 18 chr2 151897025 151897305 -101359278 + AluJo SINE Alu 5 288 -24 452 268 71 45 chr2 151897496 151897636 -101358947 + MIR SINE MIR 36 183 -79 2615 116 39 10 chr2 151897636 151898050 -101358533 + MSTA LTR MaLR 1 426 -2 452 268 71 45 chr2 151898050 151898111 -101358472 + MIR SINE MIR 183 241 -21 24 32 0 0 chr2 151899406 151899437 -101357146 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr2 151900766 151900789 -101355794 + AT_rich Low_complexity Low_complexity 1 23 0 183 129 0 0 chr2 151901300 151901331 -101355252 + (CA)n Simple_repeat Simple_repeat 2 32 0 2476 86 3 0 chr2 151902062 151902400 -101354183 + L1PA6 LINE L1 5816 6154 0 2278 68 0 7 chr2 151902403 151902696 -101353887 + AluY SINE Alu 21 311 0 3618 268 82 10 chr2 151902701 151903982 -101352601 + L1 LINE L1 2202 3574 -2572 20303 70 3 1 chr2 151904082 151906787 -101349796 - L1P LINE L1 -1093 5053 2342 361 330 158 10 chr2 151909802 151910011 -101346572 + MIR SINE MIR 23 262 0 2096 125 3 0 chr2 151910292 151910595 -101345988 + AluSp SINE Alu 1 304 -9 180 302 0 32 chr2 151910817 151910880 -101345703 + MER5B DNA MER1_type 117 177 -1 204 40 0 0 chr2 151913100 151913125 -101343458 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 276 288 0 0 chr2 151914521 151914587 -101341996 + MER46C DNA MER2_type 72 137 -201 2990 178 54 20 chr2 151914599 151915206 -101341377 - L1MA9 LINE L1 -25 6287 5660 247 303 0 0 chr2 151915225 151915291 -101341292 + (TA)n Simple_repeat Simple_repeat 2 67 0 504 230 44 0 chr2 151915291 151915426 -101341157 - L1MA9 LINE L1 -1433 4713 4573 306 50 0 0 chr2 151915680 151915720 -101340863 + (TA)n Simple_repeat Simple_repeat 2 41 0 5765 192 16 66 chr2 151915741 151916211 -101340372 - L1M2 LINE L1 -674 7057 6565 2287 95 0 0 chr2 151916211 151916505 -101340078 - AluSg1 SINE Alu -12 297 4 5765 192 16 66 chr2 151916505 151917795 -101338788 - L1M2 LINE L1 -1166 6565 5382 331 242 113 8 chr2 151917806 151917930 -101338653 - L1M2 LINE L1 -2428 5137 5001 14480 123 11 16 chr2 151918048 151920329 -101336254 - L1P LINE L1 -3865 2281 11 2101 129 0 7 chr2 151920337 151920640 -101335943 - AluSg SINE Alu -9 301 1 1166 285 31 134 chr2 151920642 151921767 -101334816 - L1M2 LINE L1 -3933 3632 2625 7626 179 25 9 chr2 151921768 151922247 -101334336 - L1PB1 LINE L1 -1 6866 6396 1672 163 52 7 chr2 151922247 151922536 -101334047 - AluSx SINE Alu -10 302 1 7626 179 25 9 chr2 151922536 151924551 -101332032 - L1PB1 LINE L1 -471 6396 4349 1644 153 17 24 chr2 151924551 151924846 -101331737 - MER4A LTR ERV1 0 664 372 478 186 21 10 chr2 151924896 151924993 -101331590 - MER4A LTR ERV1 -566 98 1 373 215 32 0 chr2 151924994 151925087 -101331496 - L1PB1 LINE L1 -2514 4348 4253 * 11057 143 30 27 chr2 151925069 151927056 -101329527 - L1PB1 LINE L1 -4867 1996 4 2815 216 19 58 chr2 151927069 151927868 -101328715 - L1M3c LINE L1 -4529 1612 844 3572 97 158 112 chr2 151927868 151928654 -101327929 - LTR12 LTR ERV1 0 826 5 2815 216 19 58 chr2 151928654 151928667 -101327916 - L1M3c LINE L1 -5297 844 832 1194 192 48 44 chr2 151928670 151929195 -101327388 - pTR5 LTR ERV1 -1094 1344 743 2747 298 31 5 chr2 151929196 151929970 -101326613 - L1M3c LINE L1 -5339 802 9 21 36 0 0 chr2 151930970 151930998 -101325585 + AT_rich Low_complexity Low_complexity 1 28 0 485 264 174 50 chr2 151932856 151933098 -101323485 + MLT1I LTR MaLR 1 272 -137 282 288 0 0 chr2 151933573 151933653 -101322930 - L1ME LINE L1 -669 5493 5414 311 271 0 41 chr2 151933697 151933819 -101322764 - L1ME LINE L1 -669 5562 5446 282 288 0 0 chr2 151934297 151934377 -101322206 - L1ME LINE L1 -671 5493 5414 286 288 0 0 chr2 151934421 151934501 -101322082 - L1ME LINE L1 -671 5493 5414 21 36 0 0 chr2 151934654 151934682 -101321901 + AT_rich Low_complexity Low_complexity 1 28 0 349 115 49 16 chr2 151934706 151934767 -101321816 + L1MC1 LINE L1 6033 6095 -238 1766 177 0 33 chr2 151934786 151935091 -101321492 - AluJb SINE Alu -17 295 1 391 258 25 30 chr2 151935114 151935312 -101321271 - L1ME LINE L1 -969 5246 5050 3352 179 78 6 chr2 151935322 151935992 -101320591 - L1MC1 LINE L1 0 6333 5616 510 241 35 7 chr2 151935996 151936141 -101320442 - L1MB7 LINE L1 0 6184 6036 1167 225 60 15 chr2 151936142 151936476 -101320107 - L1MB7 LINE L1 -176 6002 5654 775 236 43 43 chr2 151936482 151936787 -101319796 - L1ME LINE L1 -1141 5074 4770 * 1237 325 49 45 chr2 151936778 151937906 -101318677 - L1ME LINE L1 -5233 1163 32 3903 183 29 64 chr2 151937907 151939144 -101317439 + L1MA9 LINE L1 5048 6245 -67 1742 144 153 16 chr2 151939175 151939495 -101317088 - THE1B LTR MaLR 0 364 1 186 143 0 0 chr2 151940259 151940294 -101316289 + (TAA)n Simple_repeat Simple_repeat 1 35 0 24 32 0 0 chr2 151940438 151940469 -101316114 + AT_rich Low_complexity Low_complexity 1 31 0 209 105 0 26 chr2 151940641 151940679 -101315904 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 263 272 109 15 chr2 151941043 151941243 -101315340 + L1MC/D LINE L1 5327 5552 -569 35 24 0 0 chr2 151941340 151941382 -101315201 + AT_rich Low_complexity Low_complexity 1 42 0 230 368 68 0 chr2 151941480 151941613 -101314970 + MIR SINE MIR 7 148 -114 207 0 0 0 chr2 151942353 151942376 -101314207 + (T)n Simple_repeat Simple_repeat 1 23 0 23 33 0 0 chr2 151943166 151943196 -101313387 + AT_rich Low_complexity Low_complexity 1 30 0 1913 147 42 34 chr2 151945034 151945416 -101311167 + L1MB2 LINE L1 5787 6171 0 22 0 0 0 chr2 151946320 151946342 -101310241 + AT_rich Low_complexity Low_complexity 1 22 0 37 23 0 0 chr2 151947689 151947733 -101308850 + AT_rich Low_complexity Low_complexity 1 44 0 306 318 50 0 chr2 151948604 151948719 -101307864 + MIR SINE MIR 54 173 -63 932 250 107 14 chr2 151948857 151949221 -101307362 - L1ME1 LINE L1 -5 6161 5764 304 288 12 0 chr2 151949370 151949450 -101307133 - MLT1H LTR MaLR -226 323 243 773 258 84 20 chr2 151949612 151949911 -101306672 - L1ME3A LINE L1 -12 6227 5910 278 237 75 21 chr2 151949952 151950045 -101306538 - L1ME3A LINE L1 -439 5800 5703 210 118 0 0 chr2 151950118 151950152 -101306431 + (A)n Simple_repeat Simple_repeat 1 34 0 2105 106 3 7 chr2 151950197 151950500 -101306083 - AluSx SINE Alu -10 302 1 601 255 79 36 chr2 151950500 151950995 -101305588 - L1ME3A LINE L1 -724 5509 4994 28 29 0 0 chr2 151951062 151951097 -101305486 + AT_rich Low_complexity Low_complexity 1 35 0 555 316 96 37 chr2 151951176 151951824 -101304759 - L1ME3A LINE L1 -1778 4437 3752 2290 206 101 91 chr2 151951824 151952668 -101303915 - Charlie1a DNA MER1_type -597 858 7 534 307 93 50 chr2 151952682 151953197 -101303386 - L1ME3A LINE L1 -4333 2063 1527 279 54 0 0 chr2 151954147 151954184 -101302399 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 203 277 0 45 chr2 151955152 151955264 -101301319 + (CATATA)n Simple_repeat Simple_repeat 6 112 0 243 0 0 0 chr2 151957128 151957155 -101299428 + (TG)n Simple_repeat Simple_repeat 2 28 0 24 0 0 0 chr2 151957342 151957366 -101299217 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr2 151957616 151957639 -101298944 + AT_rich Low_complexity Low_complexity 1 23 0 208 244 0 0 chr2 151958455 151958500 -101298083 + (TATG)n Simple_repeat Simple_repeat 1 45 0 21 57 0 0 chr2 151959803 151959838 -101296745 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr2 151960246 151960275 -101296308 + AT_rich Low_complexity Low_complexity 1 29 0 26 30 0 0 chr2 151960425 151960458 -101296125 + AT_rich Low_complexity Low_complexity 1 33 0 22 35 0 0 chr2 151960651 151960680 -101295903 + AT_rich Low_complexity Low_complexity 1 29 0 1920 165 93 10 chr2 151961143 151961542 -101295041 - MSTB1 LTR MaLR 0 432 1 4089 245 48 75 chr2 151961633 151961815 -101294768 + L1MB8 LINE L1 11 196 -6763 4549 40 25 0 chr2 151961815 151962384 -101294199 + L1PA5 LINE L1 5560 6142 -12 4089 245 48 75 chr2 151962384 151962917 -101293666 + L1MB8 LINE L1 196 742 -6217 258 32 0 0 chr2 151962917 151962948 -101293635 + (GA)n Simple_repeat Simple_repeat 1 31 0 4089 245 48 75 chr2 151962948 151964703 -101291880 + L1MB8 LINE L1 742 2416 -4543 21 0 0 0 chr2 151964777 151964798 -101291785 + AT_rich Low_complexity Low_complexity 1 21 0 1438 257 60 42 chr2 151964940 151965483 -101291100 + L1MB8 LINE L1 2515 3046 -3911 1512 135 0 5 chr2 151965483 151965705 -101290878 + AluSg/x SINE Alu 80 300 -10 1438 257 60 42 chr2 151965705 151966139 -101290444 + L1MB8 LINE L1 3046 3471 -3486 2819 253 85 22 chr2 151966144 151967389 -101289194 + L1MB8 LINE L1 3552 4875 -2082 * 5443 181 13 13 chr2 151967385 151969223 -101287360 + L1PA16 LINE L1 4330 6166 0 4074 216 35 33 chr2 151969247 151971333 -101285250 + L1MB8 LINE L1 4879 6986 -3 947 264 127 26 chr2 151971870 151972051 -101284532 - MLT1C LTR MaLR 0 467 306 2934 168 32 73 chr2 151972051 151972772 -101283811 - LTR8 LTR ERV1 0 691 1 947 264 127 26 chr2 151972772 151973014 -101283569 - MLT1C LTR MaLR -161 306 1 213 353 59 0 chr2 151973051 151973153 -101283430 + MIR SINE MIR 57 164 -98 21 36 0 0 chr2 151975851 151975879 -101280704 + AT_rich Low_complexity Low_complexity 1 28 0 464 318 61 87 chr2 151976005 151976464 -101280119 + L2 LINE L2 2824 3270 -2 25 0 0 0 chr2 151976466 151976491 -101280092 + AT_rich Low_complexity Low_complexity 1 25 0 1986 141 49 0 chr2 151977030 151977357 -101279226 - MER7A DNA MER2_type -1 345 5 26 0 0 0 chr2 151978120 151978146 -101278437 + AT_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr2 151979162 151979185 -101277398 + AT_rich Low_complexity Low_complexity 1 23 0 246 288 25 51 chr2 151979326 151979444 -101277139 - MIR SINE MIR -92 170 56 697 230 69 0 chr2 151979887 151980061 -101276522 - MER5A DNA MER1_type -3 186 1 181 333 37 56 chr2 151980071 151980179 -101276404 + MIR SINE MIR 20 125 -137 1581 171 7 39 chr2 151980214 151980523 -101276060 + AluSx SINE Alu 1 299 -13 26 74 0 0 chr2 151980713 151980767 -101275816 + AT_rich Low_complexity Low_complexity 1 54 0 202 209 0 0 chr2 151980908 151980951 -101275632 + GA-rich Low_complexity Low_complexity 1 43 0 478 322 40 0 chr2 151980951 151981103 -101275480 + L1MCc LINE L1 1171 1328 -5095 375 23 0 0 chr2 151981107 151981151 -101275432 + (CA)n Simple_repeat Simple_repeat 1 44 0 720 282 99 18 chr2 151981201 151981915 -101274668 + L1MCc LINE L1 1423 2399 -4723 468 328 55 17 chr2 151982226 151982516 -101274067 + L1MCc LINE L1 2425 2725 -4397 278 213 21 21 chr2 151982516 151982610 -101273973 + (TA)n Simple_repeat Simple_repeat 1 94 0 411 306 96 73 chr2 151983067 151983477 -101273106 - L1MCa LINE L1 -765 2022 1358 235 317 52 31 chr2 151983504 151983829 -101272754 - L1MCa LINE L1 -4927 1489 1158 198 0 0 0 chr2 151984314 151984336 -101272247 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1406 189 39 25 chr2 151984338 151984624 -101271959 - AluJb SINE Alu -22 290 1 327 136 0 0 chr2 151985081 151985140 -101271443 + (CA)n Simple_repeat Simple_repeat 2 60 0 21 36 0 0 chr2 151985505 151985533 -101271050 + AT_rich Low_complexity Low_complexity 1 28 0 363 192 23 31 chr2 151985646 151985776 -101270807 + (TA)n Simple_repeat Simple_repeat 2 130 0 42 65 0 0 chr2 151988199 151988276 -101268307 + AT_rich Low_complexity Low_complexity 1 77 0 2618 113 8 0 chr2 151988676 151989048 -101267535 - THE1C LTR MaLR 0 375 1 198 337 92 0 chr2 151989904 151990002 -101266581 + MIR SINE MIR 50 156 -106 393 319 42 14 chr2 151991094 151991238 -101265345 + L3 LINE CR1 362 509 -1068 243 0 0 0 chr2 151991275 151991302 -101265281 + (TG)n Simple_repeat Simple_repeat 1 27 0 214 301 163 7 chr2 151992094 151992247 -101264336 + MIR SINE MIR 86 262 0 193 279 39 58 chr2 151992315 151992419 -101264164 + L3 LINE CR1 909 1010 -567 247 314 17 17 chr2 151992850 151992968 -101263615 - MER117 DNA MER1_type -6 191 74 2059 137 76 105 chr2 151995308 151995754 -101260829 + Tigger2 DNA MER2_type 1 2717 -1 410 251 79 24 chr2 151995863 151995989 -101260594 - MLT1H LTR MaLR -362 187 15 525 320 36 40 chr2 151996059 151996281 -101260302 - LTR16C LTR ERVL -182 309 89 266 316 58 5 chr2 151996560 151996750 -101259833 - L1ME3A LINE L1 -219 5951 5752 2159 95 13 3 chr2 151996953 151997258 -101259325 + AluSg SINE Alu 1 556 0 232 152 30 30 chr2 151997258 151997506 -101259077 + GA-rich Low_complexity Low_complexity 1 180 0 831 300 132 26 chr2 151997820 151999452 -101257131 - L1MEd LINE L1 -2105 4024 2221 305 287 49 28 chr2 151999461 151999604 -101256979 - L1MEd LINE L1 -3965 2164 2019 2845 201 32 15 chr2 151999712 152000404 -101256179 - Tigger7 DNA MER2_type 0 2587 1 214 250 0 0 chr2 152000436 152000492 -101256091 + (TATATG)n Simple_repeat Simple_repeat 4 59 0 1549 198 79 79 chr2 152000502 152000667 -101255916 - MLT2B1 LTR ERVL -41 479 315 2556 36 0 0 chr2 152000667 152000968 -101255615 - AluY SINE Alu -10 301 1 1549 198 79 79 chr2 152000968 152001273 -101255310 - MLT2B1 LTR ERVL -204 316 9 572 323 81 65 chr2 152001469 152002192 -101254391 - L1MEd LINE L1 -4642 1668 874 383 309 77 48 chr2 152002432 152002639 -101253944 - L1MEd LINE L1 -5283 836 624 814 154 8 0 chr2 152002785 152002915 -101253668 + FLAM_C SINE Alu 1 131 -12 578 270 124 96 chr2 152003371 152004135 -101252448 - LTR50 LTR ERVL -9 786 1 198 0 0 0 chr2 152005113 152005135 -101251448 + (TAGA)n Simple_repeat Simple_repeat 1 22 0 250 222 12 12 chr2 152006211 152006292 -101250291 + CT-rich Low_complexity Low_complexity 4 84 0 189 0 0 0 chr2 152006437 152006458 -101250125 + (A)n Simple_repeat Simple_repeat 1 21 0 205 152 0 0 chr2 152007260 152007293 -101249290 + (CA)n Simple_repeat Simple_repeat 2 34 0 296 331 78 21 chr2 152011807 152011949 -101244634 - L2 LINE L2 -18 3295 3146 220 358 0 15 chr2 152012877 152012944 -101243639 - MIR SINE MIR -168 94 29 216 0 0 0 chr2 152013287 152013311 -101243272 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 2246 129 254 48 chr2 152013502 152013627 -101242956 - MER39 LTR ERV1 0 707 609 1992 91 0 102 chr2 152013627 152013969 -101242614 - AluSx SINE Alu -5 307 1 2246 129 254 48 chr2 152013969 152014426 -101242157 - MER39 LTR ERV1 -98 609 5 269 247 0 0 chr2 152014753 152014842 -101241741 + L1MC4 LINE L1 6615 6703 -1339 3476 176 40 6 chr2 152014850 152015502 -101241081 - MER39 LTR ERV1 -33 674 1 973 7 30 7 chr2 152015505 152015640 -101240943 + (TAGA)n Simple_repeat Simple_repeat 1 138 0 29 0 0 0 chr2 152016098 152016127 -101240456 + AT_rich Low_complexity Low_complexity 1 29 0 6640 115 17 29 chr2 152017753 152019026 -101237557 - L1MA2 LINE L1 0 6304 5047 207 69 0 0 chr2 152019078 152019107 -101237476 + (CA)n Simple_repeat Simple_repeat 2 30 0 204 107 18 36 chr2 152019112 152019168 -101237415 + (TA)n Simple_repeat Simple_repeat 2 56 0 646 264 175 48 chr2 152019243 152019762 -101236821 + MER34C LTR ERV1 1 585 0 1412 191 31 44 chr2 152019930 152020223 -101236360 - AluJb SINE Alu -23 289 1 1983 140 7 10 chr2 152020352 152020659 -101235924 + AluSq SINE Alu 1 306 -7 23 33 0 0 chr2 152020731 152020761 -101235822 + AT_rich Low_complexity Low_complexity 1 30 0 3361 231 55 16 chr2 152021909 152023134 -101233449 + L1MC3 LINE L1 214 1497 -4893 2155 98 29 0 chr2 152023134 152023440 -101233143 + AluYb8 SINE Alu 1 315 -3 3361 231 55 16 chr2 152023440 152023487 -101233096 + L1MC3 LINE L1 1497 1541 -4849 920 266 86 5 chr2 152023492 152023898 -101232685 + L1M4 LINE L1 3540 3978 -2168 698 67 67 0 chr2 152024026 152024131 -101232452 + AluYb8 SINE Alu 203 314 -4 2950 255 112 25 chr2 152024185 152025481 -101231102 + L1MC3 LINE L1 3958 5365 -1199 1193 40 0 28 chr2 152025495 152025671 -101230912 + (GAAA)n Simple_repeat Simple_repeat 2 172 0 2030 228 37 7 chr2 152025726 152026161 -101230422 - MER39 LTR ERV1 0 707 260 228 224 237 13 chr2 152026136 152026212 -101230371 - MER39B LTR ERV1 -560 93 1 * 10084 217 48 14 chr2 152026212 152027781 -101228802 + L1MC3 LINE L1 5430 7126 -1077 3609 132 36 48 chr2 152027781 152028442 -101228141 + MER39B LTR ERV1 1 653 0 10084 217 48 14 chr2 152028442 152029552 -101227031 + L1MC3 LINE L1 7126 8197 -6 6609 142 9 13 chr2 152029575 152030994 -101225589 + L1MA3 LINE L1 4891 6305 0 2125 248 47 68 chr2 152031164 152031724 -101224859 - L1ME1 LINE L1 -1 6165 5595 2388 75 0 0 chr2 152031724 152032016 -101224567 + AluY SINE Alu 1 292 -19 2125 248 47 68 chr2 152032016 152032587 -101223996 - L1ME1 LINE L1 -571 5595 5013 1966 127 83 9 chr2 152032587 152032925 -101223658 - THE1B LTR MaLR 0 364 2 11172 98 14 1 chr2 152032926 152034485 -101222098 - THE1B-int LTR MaLR 0 1580 1 1868 170 22 25 chr2 152034485 152034850 -101221733 - THE1B LTR MaLR 0 364 1 2125 248 47 68 chr2 152034850 152035005 -101221578 - L1ME1 LINE L1 -1151 5015 4901 204 97 0 0 chr2 152035093 152035124 -101221459 + (CA)n Simple_repeat Simple_repeat 2 32 0 225 0 0 0 chr2 152035391 152035416 -101221167 + (CA)n Simple_repeat Simple_repeat 2 26 0 230 378 78 25 chr2 152036214 152036418 -101220165 + L2 LINE L2 3015 3229 -43 234 138 46 31 chr2 152036651 152036716 -101219867 + MER65A LTR ERV1 380 445 0 763 324 59 49 chr2 152037364 152038327 -101218256 + L1MEc LINE L1 136 1108 -5288 342 0 0 0 chr2 152038376 152038414 -101218169 + (CA)n Simple_repeat Simple_repeat 2 39 0 694 297 78 40 chr2 152038418 152039002 -101217581 + L1MEc LINE L1 1146 1792 -4475 892 125 24 65 chr2 152039061 152039229 -101217354 + MLT2A2 LTR ERVL 293 453 0 306 237 169 24 chr2 152039231 152039480 -101217103 + L1MEc LINE L1 1875 2159 -4237 * 583 263 56 114 chr2 152039460 152040182 -101216401 + L1 LINE L1 3629 4303 -1843 2048 124 10 0 chr2 152040182 152040473 -101216110 + AluSx SINE Alu 1 294 -18 583 263 56 114 chr2 152040473 152040536 -101216047 + L1 LINE L1 4303 4368 -1778 215 359 0 0 chr2 152040580 152040658 -101215925 - MIR SINE MIR -73 189 112 1092 51 14 0 chr2 152041706 152041844 -101214739 + AluY SINE Alu 170 309 -2 1612 214 80 34 chr2 152042192 152042603 -101213980 + MLT2B1 LTR ERVL 1 430 -90 286 180 22 67 chr2 152042613 152042702 -101213881 + L1MC4 LINE L1 6619 6703 -1339 26 0 0 0 chr2 152042812 152042838 -101213745 + AT_rich Low_complexity Low_complexity 1 26 0 389 105 0 0 chr2 152042840 152042897 -101213686 + MLT2B1 LTR ERVL 464 520 0 243 61 0 0 chr2 152043359 152043392 -101213191 + (CA)n Simple_repeat Simple_repeat 2 34 0 23 33 0 0 chr2 152043680 152043710 -101212873 + AT_rich Low_complexity Low_complexity 1 30 0 6903 60 11 0 chr2 152043722 152044921 -101211662 - L1PA6 LINE L1 -7 6147 4941 13309 82 5 8 chr2 152044921 152046812 -101209771 + L1P LINE L1 2094 3977 -2169 21 0 0 0 chr2 152050931 152050952 -101205631 + AT_rich Low_complexity Low_complexity 1 21 0 208 220 0 40 chr2 152051107 152051157 -101205426 + (CATATA)n Simple_repeat Simple_repeat 6 53 0 635 330 78 44 chr2 152051627 152052061 -101204522 + L2 LINE L2 2816 3264 -49 498 114 13 0 chr2 152052218 152052297 -101204286 + MADE1 DNA Mariner 1 80 0 1637 277 89 28 chr2 152052926 152053468 -101203115 - MLT1E LTR MaLR -16 577 3 651 263 43 158 chr2 152053475 152053546 -101203037 - MLT1E-int LTR MaLR -6 1365 1287 6821 66 3 1 chr2 152053546 152054902 -101201681 + L1PA7 LINE L1 4779 6138 -16 651 263 43 158 chr2 152054902 152055591 -101200992 - MLT1E-int LTR MaLR -84 1287 692 742 247 25 100 chr2 152055792 152056095 -101200488 - MLT1E-int LTR MaLR -764 607 243 1698 181 7 10 chr2 152056095 152056393 -101200190 + AluJo SINE Alu 1 297 -15 742 247 25 100 chr2 152056393 152056620 -101199963 - MLT1E-int LTR MaLR -1128 243 1 1833 264 39 52 chr2 152056629 152057223 -101199360 - MLT1E LTR MaLR -5 588 3 325 276 89 25 chr2 152057344 152057547 -101199036 - L1M4 LINE L1 -3594 2552 2337 2243 216 60 33 chr2 152058494 152059092 -101197491 + MER90 LTR ERV1 1 614 0 1684 201 0 7 chr2 152059185 152059489 -101197094 + AluJb SINE Alu 1 302 -10 342 335 12 12 chr2 152059521 152059682 -101196901 + T-rich Low_complexity Low_complexity 4 164 0 571 272 84 29 chr2 152059725 152060034 -101196549 - L1ME1 LINE L1 -4 6162 5837 1055 243 48 13 chr2 152060034 152060533 -101196050 - L1ME1 LINE L1 -592 5574 5054 1528 201 4 4 chr2 152060546 152060819 -101195764 + AluJb SINE Alu 13 285 -27 257 298 111 87 chr2 152060947 152061073 -101195510 - L2 LINE L2 -231 3082 2960 2006 147 0 0 chr2 152061073 152061366 -101195217 + AluSx SINE Alu 4 296 -16 257 298 111 87 chr2 152061366 152061491 -101195092 - L2 LINE L2 -353 2960 2825 216 138 46 0 chr2 152061501 152061566 -101195017 + (TAGA)n Simple_repeat Simple_repeat 4 71 0 546 250 32 0 chr2 152061996 152062120 -101194463 - FLAM_C SINE Alu -5 128 1 1623 139 174 16 chr2 152062221 152062589 -101193994 - MSTA LTR MaLR -2 426 1 8278 169 7 40 chr2 152062589 152064220 -101192363 - MSTA-int LTR MaLR 0 1580 3 894 211 138 84 chr2 152064222 152064578 -101192005 - MSTA LTR MaLR 0 375 1 361 285 8 16 chr2 152065681 152065804 -101190779 + (TA)n Simple_repeat Simple_repeat 1 122 0 295 278 11 11 chr2 152067044 152067134 -101189449 + MER5B DNA MER1_type 1 90 -88 1734 193 27 18 chr2 152067280 152067522 -101189061 - MER2 DNA MER2_type 0 345 98 2287 166 33 23 chr2 152067522 152067951 -101188632 + Tigger2a DNA MER2_type 1 433 -1 1734 193 27 18 chr2 152067951 152068045 -101188538 - MER2 DNA MER2_type -247 98 6 283 326 101 0 chr2 152068052 152068141 -101188442 - MER5A DNA MER1_type -83 106 9 1384 236 25 39 chr2 152069183 152069374 -101187209 - MLT1E1 LTR MaLR -201 453 268 1911 196 3 11 chr2 152069374 152069742 -101186841 - MLT1A1 LTR MaLR 0 365 1 1384 236 25 39 chr2 152069742 152069914 -101186669 - MLT1E1 LTR MaLR -386 268 95 2238 236 20 0 chr2 152069914 152070371 -101186212 + MLT1A2-int LTR MaLR 1270 1735 0 557 214 6 112 chr2 152070374 152070552 -101186031 + MLT1A2 LTR MaLR 4 162 -212 542 257 28 108 chr2 152070608 152070949 -101185634 - L1M4 LINE L1 -1748 4634 4326 1209 215 47 59 chr2 152070949 152071372 -101185211 - LTR52 LTR ERVL -2 419 2 542 257 28 108 chr2 152071372 152071419 -101185164 - L1M4 LINE L1 -2056 4326 4277 696 285 118 27 chr2 152071503 152073035 -101183548 - L1M4c LINE L1 -3580 2802 1020 1607 241 59 5 chr2 152073281 152073721 -101182862 + MLT2C2 LTR ERVL 1 464 0 14029 217 44 34 chr2 152073734 152075268 -101181315 + ERVL LTR ERVL 16 1532 -4232 250 242 0 0 chr2 152075268 152075330 -101181253 - L1MA4A LINE L1 -34 6269 6208 14029 217 44 34 chr2 152075330 152076926 -101179657 + ERVL LTR ERVL 1532 3346 -2418 1931 133 0 14 chr2 152076926 152077256 -101179327 - AluSg SINE Alu 0 310 1 14029 217 44 34 chr2 152077256 152077798 -101178785 + ERVL LTR ERVL 3346 3881 -1883 2356 220 14 86 chr2 152077798 152078511 -101178072 - LTR8 LTR ERV1 0 691 30 7285 198 51 19 chr2 152078565 152080122 -101176461 + ERVL LTR ERVL 3877 5482 -282 444 149 0 23 chr2 152080136 152080223 -101176360 - ERVL LTR ERVL -185 5579 5495 3237 157 75 27 chr2 152080226 152080852 -101175731 - MER50 LTR ERV1 -78 656 1 1903 213 44 33 chr2 152081691 152082241 -101174342 - LTR38 LTR ERV1 0 556 1 304 105 66 0 chr2 152082305 152082381 -101174202 + (TA)n Simple_repeat Simple_repeat 2 82 0 218 200 0 0 chr2 152083111 152083156 -101173427 + (TTATG)n Simple_repeat Simple_repeat 3 47 0 1898 136 0 4 chr2 152084525 152084819 -101171764 - AluSx SINE Alu 0 307 15 399 269 0 10 chr2 152084819 152084923 -101171660 + MLT1H LTR MaLR 63 165 -384 322 286 55 0 chr2 152085405 152085496 -101171087 - MER5B DNA MER1_type -34 144 49 39 50 0 0 chr2 152086139 152086199 -101170384 + AT_rich Low_complexity Low_complexity 1 60 0 8788 192 47 8 chr2 152086924 152089212 -101167371 + L1MA9 LINE L1 3414 5829 -483 443 48 16 0 chr2 152089212 152089274 -101167309 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 8788 192 47 8 chr2 152089274 152089775 -101166808 + L1MA9 LINE L1 5829 6309 -3 671 297 139 61 chr2 152091019 152091594 -101164989 + L1ME LINE L1 3 622 -5448 238 241 17 0 chr2 152091593 152091651 -101164932 + L1 LINE L1 3349 3407 -2739 * 1828 175 56 28 chr2 152091985 152092513 -101164070 - MLT2A2 LTR ERVL 0 554 1 298 203 72 0 chr2 152092522 152092591 -101163992 + L1ME LINE L1 5113 5186 -960 271 260 23 22 chr2 152092709 152092811 -101163772 + L1ME LINE L1 5472 5574 -610 405 194 10 31 chr2 152092897 152092995 -101163588 + L1ME LINE L1 5718 5813 -357 458 245 7 0 chr2 152094036 152094187 -101162396 + GA-rich Low_complexity Low_complexity 2 153 0 234 341 0 0 chr2 152094537 152094619 -101161964 - MLT1-int LTR MaLR -258 1113 1032 2120 81 0 0 chr2 152096685 152096958 -101159625 + AluY SINE Alu 37 309 -2 260 271 12 0 chr2 152098262 152098347 -101158236 + (TCTA)n Simple_repeat Simple_repeat 1 86 0 329 329 37 22 chr2 152099870 152100006 -101156577 + MIR SINE MIR 11 149 -59 5091 145 20 18 chr2 152102892 152103886 -101152697 - L1PA16 LINE L1 -16 6150 5142 1733 138 50 56 chr2 152103886 152104263 -101152320 - THE1C LTR MaLR 0 375 1 5091 145 20 18 chr2 152104263 152104458 -101152125 - L1PA16 LINE L1 -1024 5142 4949 2744 261 45 19 chr2 152104458 152105456 -101151127 - L1PA12 LINE L1 -4390 3194 2156 703 338 23 25 chr2 152105978 152106377 -101150206 - L1PA12 LINE L1 -7167 414 17 328 20 41 0 chr2 152107355 152107404 -101149179 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 2000 139 0 7 chr2 152107408 152107717 -101148866 - AluSc SINE Alu 0 309 3 461 316 49 39 chr2 152108029 152108314 -101148269 + L2 LINE L2 2837 3124 -189 1229 239 127 50 chr2 152108386 152108905 -101147678 + MER101B LTR ERV1 12 570 0 190 263 13 40 chr2 152108978 152109054 -101147529 + L2 LINE L2 3154 3227 -86 705 202 31 0 chr2 152110399 152110528 -101146055 - FLAM_C SINE Alu 0 133 1 2302 66 0 7 chr2 152110912 152111201 -101145382 + AluY SINE Alu 1 287 -24 26 0 0 0 chr2 152111201 152111227 -101145356 + AT_rich Low_complexity Low_complexity 1 26 0 242 200 20 0 chr2 152111227 152111277 -101145306 - MIR SINE MIR -69 139 89 1768 182 36 30 chr2 152111666 152112028 -101144555 - THE1B LTR MaLR 0 364 1 10765 113 15 8 chr2 152112028 152113598 -101142985 - THE1B-int LTR MaLR 0 1580 1 1854 160 44 41 chr2 152113598 152113961 -101142622 - THE1B LTR MaLR 0 364 1 303 122 0 0 chr2 152113961 152114010 -101142573 + (GGGA)n Simple_repeat Simple_repeat 1 49 0 360 0 0 0 chr2 152114363 152114403 -101142180 + (TG)n Simple_repeat Simple_repeat 1 40 0 563 290 62 70 chr2 152114447 152114706 -101141877 + MIR SINE MIR 4 260 -2 1590 226 89 103 chr2 152115301 152115789 -101140794 - L1M4 LINE L1 -1331 4815 4321 1702 90 9 0 chr2 152115789 152116012 -101140571 - AluSc SINE Alu -12 297 73 268 143 0 0 chr2 152116012 152116054 -101140529 - AluSc SINE Alu -261 42 1 1590 226 89 103 chr2 152116054 152116347 -101140236 - L1M4 LINE L1 -1824 4322 4007 1760 162 7 14 chr2 152116347 152116643 -101139940 - AluSx SINE Alu -18 294 1 1590 226 89 103 chr2 152116643 152116843 -101139740 - L1M4 LINE L1 -2139 4007 3806 428 306 31 5 chr2 152116860 152117053 -101139530 - L1MEc LINE L1 -5611 785 588 212 222 0 0 chr2 152117704 152117749 -101138834 - MIR SINE MIR 0 262 218 291 224 0 0 chr2 152118055 152118131 -101138452 + (TATATG)n Simple_repeat Simple_repeat 3 78 0 1080 259 0 0 chr2 152118131 152118374 -101138209 - AluJo SINE Alu -23 289 47 205 328 0 0 chr2 152119841 152119905 -101136678 + CT-rich Low_complexity Low_complexity 4 67 0 482 48 16 0 chr2 152120258 152120320 -101136263 + U7 snRNA snRNA 1 63 0 261 291 68 34 chr2 152120587 152120704 -101135879 + L2 LINE L2 3137 3257 -15 320 310 16 54 chr2 152121293 152121422 -101135161 + MIR SINE MIR 20 143 -119 2014 162 91 12 chr2 152122551 152122978 -101133605 + LOR1b LTR ERV1 1 461 0 229 304 14 72 chr2 152123667 152123805 -101132778 + MIR SINE MIR 89 218 -44 31 0 0 0 chr2 152125531 152125562 -101131021 + AT_rich Low_complexity Low_complexity 1 31 0 5587 42 1 0 chr2 152125563 152126247 -101130336 - L1PA4 LINE L1 -1 6154 5470 * 7843 41 1 0 chr2 152126236 152127954 -101128629 - L1PA4 LINE L1 -5 6150 4429 7403 39 0 0 chr2 152127964 152128860 -101127723 + L1PA4 LINE L1 3528 4423 -1723 283 296 9 46 chr2 152129001 152129109 -101127474 - LTR16C LTR ERVL -108 383 280 450 290 77 12 chr2 152129402 152129571 -101127012 - L2 LINE L2 0 3313 3134 674 285 112 74 chr2 152129710 152130066 -101126517 - L2 LINE L2 -520 2794 2410 1969 119 46 35 chr2 152130066 152130437 -101126146 - THE1C LTR MaLR 0 375 1 674 285 112 74 chr2 152130437 152130609 -101125974 - L2 LINE L2 -904 2410 2246 2596 288 98 61 chr2 152130631 152131029 -101125554 - L2 LINE L2 -1340 1974 1592 1768 180 12 47 chr2 152131029 152131430 -101125153 - MLT1B LTR MaLR -1 389 3 2596 288 98 61 chr2 152131430 152132529 -101124054 - L2 LINE L2 -1722 1592 421 254 284 29 29 chr2 152132767 152132869 -101123714 - MIR SINE MIR -5 257 156 338 235 99 0 chr2 152132954 152133035 -101123548 - MIR SINE MIR -90 172 84 561 345 58 79 chr2 152133810 152134227 -101122356 + L2 LINE L2 2837 3244 -28 22 0 0 0 chr2 152135155 152135177 -101121406 + AT_rich Low_complexity Low_complexity 1 22 0 186 43 0 0 chr2 152135669 152135692 -101120891 + (GA)n Simple_repeat Simple_repeat 1 23 0 * 231 36 0 0 chr2 152135691 152135719 -101120864 + (TG)n Simple_repeat Simple_repeat 2 29 0 521 294 49 20 chr2 152136082 152136286 -101120297 - MIR SINE MIR -4 258 49 1774 166 68 0 chr2 152136442 152136767 -101119816 - MER7A DNA MER2_type 0 346 2 23 68 0 0 chr2 152137115 152137159 -101119424 + AT_rich Low_complexity Low_complexity 1 44 0 387 299 130 5 chr2 152137186 152137370 -101119213 - MIR SINE MIR -50 212 6 342 291 10 0 chr2 152137515 152137618 -101118965 - L1ME1 LINE L1 -5 6161 6058 1506 280 66 16 chr2 152137667 152138007 -101118576 - L1M4 LINE L1 -1765 4381 4059 441 0 0 0 chr2 152138007 152138056 -101118527 + (TG)n Simple_repeat Simple_repeat 2 50 0 1406 195 35 32 chr2 152138057 152138339 -101118244 - AluSx SINE Alu -19 283 1 1506 280 66 16 chr2 152138339 152138617 -101117966 - L1M4 LINE L1 -2086 4060 3730 321 288 17 25 chr2 152138642 152138760 -101117823 - L1MCc LINE L1 -5654 769 653 1179 251 96 23 chr2 152138866 152139293 -101117290 - L1MCc LINE L1 -5944 479 22 28 29 0 0 chr2 152140158 152140193 -101116390 + AT_rich Low_complexity Low_complexity 1 35 0 255 333 43 21 chr2 152140350 152140443 -101116140 - L2 LINE L2 -5 3267 3173 2459 113 25 0 chr2 152140499 152140852 -101115731 - THE1B LTR MaLR -2 362 1 700 156 23 81 chr2 152142022 152142195 -101114388 + L1MA9 LINE L1 6150 6312 0 2168 166 34 5 chr2 152142436 152142852 -101113731 - MSTA LTR MaLR 0 428 1 2880 195 54 8 chr2 152143116 152143743 -101112840 - L1MB5 LINE L1 -8 6166 5511 683 154 0 0 chr2 152143743 152143847 -101112736 - AluSq/x SINE Alu -209 104 1 21 57 0 0 chr2 152144371 152144406 -101112177 + AT_rich Low_complexity Low_complexity 1 35 0 192 338 78 0 chr2 152146057 152146134 -101110449 - MIR SINE MIR -67 141 59 188 344 117 16 chr2 152146306 152146434 -101110149 - MIR SINE MIR -102 160 20 3325 153 35 0 chr2 152146574 152147124 -101109459 - LTR26 LTR ERV1 -34 569 1 807 174 60 27 chr2 152147503 152147687 -101108896 + MER31B LTR ERV1 268 457 -9 203 298 154 10 chr2 152148169 152148273 -101108310 - L2 LINE L2 0 3313 3195 205 162 0 0 chr2 152148871 152148908 -101107675 + T-rich Low_complexity Low_complexity 6 42 0 242 200 0 33 chr2 152150515 152150575 -101106008 + (TA)n Simple_repeat Simple_repeat 1 58 0 211 121 76 15 chr2 152152088 152152154 -101104429 + (TA)n Simple_repeat Simple_repeat 2 71 0 29 0 0 0 chr2 152153174 152153203 -101103380 + AT_rich Low_complexity Low_complexity 1 29 0 198 0 0 0 chr2 152153606 152153628 -101102955 + (TG)n Simple_repeat Simple_repeat 2 23 0 613 197 47 31 chr2 152154427 152154554 -101102029 - FLAM_A SINE Alu -1 132 4 484 277 74 63 chr2 152154648 152154919 -101101664 - L1MC4 LINE L1 -145 7897 7624 2350 94 3 0 chr2 152154940 152155247 -101101336 + AluSp SINE Alu 1 308 -5 795 281 94 31 chr2 152155248 152155768 -101100815 + L1MC4 LINE L1 6901 7453 -589 192 77 0 0 chr2 152156453 152156479 -101100104 + (A)n Simple_repeat Simple_repeat 1 26 0 260 301 89 16 chr2 152157468 152157591 -101098992 + MER94 DNA DNA 1 132 -2 189 335 95 38 chr2 152157638 152157796 -101098787 + L2 LINE L2 2274 2440 -874 443 306 47 15 chr2 152157920 152158390 -101098193 - L1MB5 LINE L1 -658 5508 5030 2063 16 0 24 chr2 152158497 152158751 -101097832 - L1PA2 LINE L1 -4 6151 5904 1441 291 90 38 chr2 152158897 152160425 -101096158 - L1MB5 LINE L1 -1618 4528 2922 415 235 30 0 chr2 152160422 152160554 -101096029 - L1M4 LINE L1 -1712 4434 4299 * 236 277 11 11 chr2 152161199 152161293 -101095290 - L1M4 LINE L1 -3733 2413 2320 245 29 29 0 chr2 152161413 152161447 -101095136 + (CA)n Simple_repeat Simple_repeat 2 36 0 266 306 72 45 chr2 152161678 152161789 -101094794 + L2 LINE L2 3196 3309 -4 345 245 0 0 chr2 152161800 152161902 -101094681 + GA-rich Low_complexity Low_complexity 3 104 0 25 65 0 0 chr2 152162417 152162463 -101094120 + AT_rich Low_complexity Low_complexity 1 46 0 3277 164 36 23 chr2 152162980 152163644 -101092939 + L1MA10 LINE L1 5654 6326 -8 239 276 81 92 chr2 152163984 152164158 -101092425 - MIR SINE MIR -42 220 49 29 28 0 0 chr2 152164412 152164448 -101092135 + AT_rich Low_complexity Low_complexity 1 36 0 22 56 0 0 chr2 152165077 152165113 -101091470 + AT_rich Low_complexity Low_complexity 1 36 0 224 286 0 14 chr2 152165657 152165727 -101090856 + L2 LINE L2 3245 3313 0 522 119 0 0 chr2 152166008 152166092 -101090491 + (GGAA)n Simple_repeat Simple_repeat 4 87 0 2138 106 7 10 chr2 152168079 152168382 -101088201 + AluSc SINE Alu 1 302 -7 22 0 0 0 chr2 152168622 152168644 -101087939 + AT_rich Low_complexity Low_complexity 1 22 0 475 298 49 17 chr2 152169126 152169347 -101087236 + L1MC4a LINE L1 5505 5731 -461 528 264 137 38 chr2 152169962 152170174 -101086409 + L1MC4a LINE L1 5724 5956 -165 396 0 0 0 chr2 152170284 152170328 -101086255 + (TA)n Simple_repeat Simple_repeat 2 45 0 1625 173 20 33 chr2 152170629 152170930 -101085653 - AluJb SINE Alu -15 297 1 459 299 21 14 chr2 152171319 152171463 -101085120 - MIR SINE MIR -32 230 86 656 284 25 25 chr2 152172442 152172639 -101083944 + MIR SINE MIR 36 232 -30 29 0 0 0 chr2 152172721 152172750 -101083833 + AT_rich Low_complexity Low_complexity 1 29 0 2078 133 47 39 chr2 152172974 152173335 -101083248 + THE1B LTR MaLR 1 364 0 7376 95 2 2 chr2 152173335 152174324 -101082259 + THE1B-int LTR MaLR 1 989 -591 582 119 36 25 chr2 152174324 152174450 -101082133 + THE1B LTR MaLR 266 364 0 351 307 133 18 chr2 152175219 152175444 -101081139 + HAL1 LINE L1 862 1112 -1395 2086 91 59 0 chr2 152175610 152175896 -101080687 + AluY SINE Alu 1 303 -8 22 0 0 0 chr2 152178910 152178932 -101077651 + AT_rich Low_complexity Low_complexity 1 22 0 28 48 0 0 chr2 152179609 152179651 -101076932 + AT_rich Low_complexity Low_complexity 1 42 0 324 327 18 9 chr2 152179742 152179855 -101076728 - L2 LINE L2 -5 3308 3195 180 152 0 0 chr2 152180081 152180114 -101076469 + GA-rich Low_complexity Low_complexity 1 33 0 208 229 0 49 chr2 152181207 152181268 -101075315 + GA-rich Low_complexity Low_complexity 4 61 0 33 25 0 0 chr2 152181526 152181566 -101075017 + AT_rich Low_complexity Low_complexity 1 40 0 223 350 0 10 chr2 152181793 152181890 -101074693 + CT-rich Low_complexity Low_complexity 1 96 0 252 333 144 29 chr2 152185086 152185260 -101071323 - L2 LINE L2 -579 2735 2542 416 252 73 24 chr2 152185357 152185480 -101071103 + MIR SINE MIR 45 173 -89 225 254 0 0 chr2 152185625 152185696 -101070887 + (TATG)n Simple_repeat Simple_repeat 2 72 0 405 368 42 0 chr2 152185781 152185947 -101070636 + MER5B DNA MER1_type 6 178 0 403 273 220 13 chr2 152185964 152186114 -101070469 - MER5A DNA MER1_type 0 189 9 3167 100 1 0 chr2 152186424 152186869 -101069714 + L1PA6 LINE L1 5675 6120 -34 47 53 0 0 chr2 152186881 152186956 -101069627 + AT_rich Low_complexity Low_complexity 1 75 0 470 280 91 11 chr2 152186976 152187151 -101069432 - MIR SINE MIR 0 262 74 25 31 0 0 chr2 152188308 152188340 -101068243 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr2 152189276 152189297 -101067286 + AT_rich Low_complexity Low_complexity 1 21 0 27 29 0 0 chr2 152190102 152190136 -101066447 + AT_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr2 152190415 152190437 -101066146 + AT_rich Low_complexity Low_complexity 1 22 0 294 319 91 26 chr2 152191334 152191575 -101065008 + L1ME1 LINE L1 568 823 -5573 901 231 90 91 chr2 152191599 152192068 -101064515 + L1ME1 LINE L1 762 1230 -5176 2251 166 38 42 chr2 152192068 152192573 -101064010 + L1MA7 LINE L1 5788 6290 -1 901 231 90 91 chr2 152192573 152192870 -101063713 + L1ME1 LINE L1 1230 1494 -4912 467 46 31 0 chr2 152192870 152192935 -101063648 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 901 231 90 91 chr2 152192935 152192959 -101063624 + L1ME1 LINE L1 1494 1517 -4889 352 222 95 74 chr2 152192971 152193160 -101063423 + L1ME1 LINE L1 2704 2896 -3510 436 293 10 0 chr2 152193161 152193260 -101063323 + MER58 DNA MER1_type 1 100 -241 523 128 96 0 chr2 152193271 152193365 -101063218 + MER58 DNA MER1_type 2318 2420 0 865 299 89 11 chr2 152193431 152194079 -101062504 + L1ME1 LINE L1 2927 3625 -2781 * 2154 232 31 7 chr2 152194046 152194649 -101061934 + L1ME1 LINE L1 4691 5308 -1098 732 268 152 28 chr2 152194756 152195189 -101061394 + L1ME1 LINE L1 5937 6408 -18 474 311 79 18 chr2 152195193 152195421 -101061162 - MIR SINE MIR -1 261 20 2287 77 7 0 chr2 152195421 152195721 -101060862 + AluY SINE Alu 1 302 -9 2098 132 0 0 chr2 152195731 152196035 -101060548 + AluSc SINE Alu 1 304 -5 1338 203 0 60 chr2 152202262 152202578 -101054005 + AluJb SINE Alu 12 308 -4 313 331 66 28 chr2 152202715 152202896 -101053687 - MIR SINE MIR -31 231 44 510 65 0 0 chr2 152203350 152203427 -101053156 + L1PA8 LINE L1 6096 6172 0 264 59 0 0 chr2 152204551 152204585 -101051998 + (A)n Simple_repeat Simple_repeat 1 34 0 256 200 25 0 chr2 152204645 152204725 -101051858 + CT-rich Low_complexity Low_complexity 1 82 0 266 200 0 0 chr2 152207133 152207178 -101049405 - L2 LINE L2 -4 3309 3265 2111 130 0 0 chr2 152207294 152207602 -101048981 + AluSx SINE Alu 1 308 -4 383 314 103 33 chr2 152209889 152210131 -101046452 + MIR SINE MIR 3 261 -1 466 275 53 8 chr2 152211334 152211465 -101045118 + L1ME LINE L1 5497 5633 -488 747 169 41 12 chr2 152211586 152211758 -101044825 - L1MA9 LINE L1 -3 6309 6133 201 368 13 0 chr2 152211873 152211949 -101044634 + L2 LINE L2 3237 3313 0 447 174 0 0 chr2 152212650 152212736 -101043847 + (TATG)n Simple_repeat Simple_repeat 1 86 0 396 0 0 0 chr2 152214107 152214151 -101042432 + (CA)n Simple_repeat Simple_repeat 1 44 0 351 0 0 0 chr2 152214472 152214511 -101042072 + (CA)n Simple_repeat Simple_repeat 2 40 0 325 338 19 19 chr2 152214795 152214949 -101041634 - L3b LINE CR1 -314 1269 1116 2469 146 5 0 chr2 152216161 152216558 -101040025 + MER57A LTR ERV1 1 399 -4 765 344 46 23 chr2 152216978 152217370 -101039213 + L2 LINE L2 2913 3313 0 779 284 107 20 chr2 152218196 152218587 -101037996 - LTR33A LTR ERVL 0 523 99 2080 131 16 0 chr2 152218820 152219125 -101037458 + AluSq SINE Alu 1 310 -3 219 36 0 0 chr2 152221244 152221272 -101035311 + (CA)n Simple_repeat Simple_repeat 2 29 0 279 71 0 0 chr2 152221272 152221314 -101035269 + (CAGAGA)n Simple_repeat Simple_repeat 6 47 0 705 295 89 85 chr2 152222369 152223139 -101033444 + HAL1 LINE L1 819 1596 -911 410 0 20 0 chr2 152223139 152223189 -101033394 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 705 295 89 85 chr2 152223189 152223487 -101033096 + HAL1 LINE L1 1596 1891 -616 248 273 114 0 chr2 152223779 152223867 -101032716 + HAL1 LINE L1 2073 2170 -337 2153 123 0 0 chr2 152224149 152224451 -101032132 - AluSg SINE Alu -8 302 1 285 275 65 61 chr2 152224469 152224698 -101031885 + HAL1 LINE L1 2270 2499 -8 22 0 0 0 chr2 152224704 152224726 -101031857 + AT_rich Low_complexity Low_complexity 1 22 0 1540 193 25 0 chr2 152225345 152225619 -101030964 - AluJo SINE Alu -30 282 2 504 298 62 27 chr2 152226525 152226750 -101029833 - MIR SINE MIR 0 262 30 245 292 135 0 chr2 152226937 152227026 -101029557 + L2 LINE L2 2949 3049 -264 763 206 0 0 chr2 152227057 152227188 -101029395 + FLAM_C SINE Alu 1 131 -2 957 126 0 27 chr2 152227205 152227388 -101029195 + (GGGAA)n Simple_repeat Simple_repeat 1 178 0 495 283 33 26 chr2 152227449 152227601 -101028982 + L2 LINE L2 3160 3312 -1 678 283 14 27 chr2 152228874 152229093 -101027490 + MIR SINE MIR 37 252 -10 202 130 43 22 chr2 152229174 152229220 -101027363 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 317 388 21 16 chr2 152229671 152229913 -101026670 + L2 LINE L2 2716 2958 -356 711 29 29 0 chr2 152230021 152230123 -101026460 + (TAGA)n Simple_repeat Simple_repeat 1 105 0 250 245 0 0 chr2 152230124 152230177 -101026406 + (TATATG)n Simple_repeat Simple_repeat 6 58 0 436 308 0 8 chr2 152230186 152230319 -101026264 + MLT1G1 LTR MaLR 464 595 0 1538 268 82 49 chr2 152230361 152231317 -101025266 + L2 LINE L2 2249 3249 -64 25 51 0 0 chr2 152231608 152231647 -101024936 + AT_rich Low_complexity Low_complexity 1 39 0 782 146 8 0 chr2 152231801 152231924 -101024659 + MLT2B1 LTR ERVL 4 127 -393 266 312 64 0 chr2 152232135 152232244 -101024339 - MER20B DNA MER1_type -632 151 36 2209 109 0 3 chr2 152232336 152232640 -101023943 + AluSx SINE Alu 1 303 -9 23 33 0 0 chr2 152232665 152232695 -101023888 + AT_rich Low_complexity Low_complexity 1 30 0 306 269 213 21 chr2 152234184 152234325 -101022258 + MER91B DNA MER1_type 12 179 -11 270 0 0 0 chr2 152235904 152235934 -101020649 + (CA)n Simple_repeat Simple_repeat 1 30 0 28 48 0 0 chr2 152236259 152236301 -101020282 + AT_rich Low_complexity Low_complexity 1 42 0 46 16 0 16 chr2 152236377 152236419 -101020164 + AT_rich Low_complexity Low_complexity 1 43 -20 2237 84 0 0 chr2 152236419 152236706 -101019877 - AluY SINE Alu -23 288 2 46 16 0 16 chr2 152236706 152236727 -101019856 + AT_rich Low_complexity Low_complexity 43 63 0 576 301 108 44 chr2 152237604 152238086 -101018497 - LTR33 LTR ERVL 0 521 9 395 292 156 7 chr2 152238206 152238360 -101018223 - MIR SINE MIR -34 228 52 345 88 59 128 chr2 152238645 152238747 -101017836 + MER53 DNA DNA 95 189 0 192 374 101 14 chr2 152238989 152239128 -101017455 - L2 LINE L2 -562 2752 2602 22 0 0 0 chr2 152239149 152239171 -101017412 + AT_rich Low_complexity Low_complexity 1 22 0 2500 51 0 29 chr2 152239635 152239951 -101016632 - AluY SINE Alu -2 309 3 21 0 0 0 chr2 152239988 152240009 -101016574 + AT_rich Low_complexity Low_complexity 1 21 0 225 317 58 25 chr2 152241671 152241791 -101014792 - L2 LINE L2 -5 3267 3144 378 268 169 0 chr2 152242688 152242830 -101013753 - MIR SINE MIR -50 212 47 269 361 34 54 chr2 152243206 152243411 -101013172 - MIR SINE MIR -29 233 33 359 266 107 18 chr2 152245224 152245393 -101011190 + MER106A DNA MER1_type 1 184 -52 321 200 146 27 chr2 152245422 152245532 -101011051 + MER106A DNA MER1_type 108 230 -6 1504 145 94 6 chr2 152246712 152246855 -101009728 - L1P5 LINE L1 -596 5555 5426 188 35 35 0 chr2 152246855 152246884 -101009699 + (TTG)n Simple_repeat Simple_repeat 1 30 0 1504 145 94 6 chr2 152246884 152247193 -101009390 - L1P5 LINE L1 -725 5426 5063 4722 189 20 3 chr2 152247209 152248179 -101008404 + L1 LINE L1 4041 5026 -1120 210 242 25 92 chr2 152250572 152250692 -101005891 - L2 LINE L2 -1555 1759 1648 239 361 82 54 chr2 152250737 152251089 -101005494 - L2 LINE L2 -2070 1244 883 22 70 0 0 chr2 152251532 152251575 -101005008 + AT_rich Low_complexity Low_complexity 1 43 0 233 206 20 59 chr2 152251636 152251738 -101004845 + HAL1b LINE L1 739 836 -512 21 36 0 0 chr2 152251961 152251989 -101004594 + AT_rich Low_complexity Low_complexity 1 28 0 2299 157 7 30 chr2 152252537 152252944 -101003639 - MLT2D LTR ERVL -15 399 2 234 0 0 0 chr2 152253593 152253619 -101002964 + (A)n Simple_repeat Simple_repeat 1 26 0 274 400 8 0 chr2 152254105 152254225 -101002358 - MIR3 SINE MIR -48 160 40 1990 134 3 3 chr2 152254684 152254982 -101001601 + AluSx SINE Alu 1 298 -14 2193 94 0 10 chr2 152255025 152255334 -101001249 + AluY SINE Alu 1 306 -5 238 270 27 40 chr2 152255368 152255442 -101001141 + L3b LINE CR1 1230 1302 -281 257 250 42 0 chr2 152255773 152255845 -101000738 + MIR3 SINE MIR 84 158 -50 22 35 0 0 chr2 152256060 152256089 -101000494 + AT_rich Low_complexity Low_complexity 1 29 0 800 118 0 8 chr2 152256089 152256208 -101000375 - FLAM_C SINE Alu -15 118 1 31 44 0 0 chr2 152256246 152256291 -101000292 + AT_rich Low_complexity Low_complexity 1 45 0 272 291 27 9 chr2 152256332 152256442 -101000141 - L1ME LINE L1 -406 6213 6102 295 313 68 14 chr2 152256692 152256839 -100999744 - MIR SINE MIR -34 228 74 22 35 0 0 chr2 152256992 152257021 -100999562 + AT_rich Low_complexity Low_complexity 1 29 0 186 350 49 32 chr2 152257149 152257272 -100999311 - MIR3 SINE MIR -25 183 59 357 229 133 9 chr2 152258310 152258415 -100998168 + MER94 DNA DNA 16 133 -1 767 134 8 0 chr2 152258560 152258679 -100997904 + FLAM_C SINE Alu 1 120 -13 1074 144 0 0 chr2 152258679 152258859 -100997724 + (TA)n Simple_repeat Simple_repeat 1 180 0 284 388 51 0 chr2 152258934 152259130 -100997453 + L3 LINE CR1 1175 1380 -197 254 229 73 42 chr2 152259152 152259248 -100997335 + MIR SINE MIR 35 133 -75 267 103 0 0 chr2 152259978 152260017 -100996566 + (TG)n Simple_repeat Simple_repeat 2 40 0 716 152 165 13 chr2 152260122 152260280 -100996303 - MER46B DNA MER2_type -178 58 2 229 45 23 45 chr2 152260284 152260328 -100996255 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 1319 222 102 0 chr2 152260328 152260652 -100995931 - L1ME LINE L1 -551 6131 5775 21 0 0 0 chr2 152260686 152260707 -100995876 + AT_rich Low_complexity Low_complexity 1 21 0 3014 257 54 65 chr2 152260714 152263276 -100993307 - L1ME LINE L1 -3950 2696 13 672 298 46 83 chr2 152263442 152263768 -100992815 - ERVL LTR ERVL -3570 2194 1881 1800 108 90 8 chr2 152263861 152264129 -100992454 - AluSx SINE Alu -21 291 2 754 328 53 40 chr2 152264219 152264532 -100992051 - ERVL LTR ERVL -3414 1582 1261 3179 114 39 102 chr2 152264532 152265179 -100991404 - MER4B LTR ERV1 -4 606 1 754 328 53 40 chr2 152265179 152265261 -100991322 - ERVL LTR ERVL -3735 1261 1182 422 348 43 45 chr2 152265236 152265612 -100990971 - ERVL LTR ERVL -4619 377 3 * 740 297 90 45 chr2 152265614 152266058 -100990525 - LTR16B LTR ERVL 0 464 1 36 70 0 0 chr2 152266459 152266530 -100990053 + AT_rich Low_complexity Low_complexity 1 71 0 560 288 55 25 chr2 152266535 152266861 -100989722 + L1MB5 LINE L1 4487 4822 -1324 2191 275 67 50 chr2 152266873 152266895 -100989688 + L1MEc LINE L1 18 38 -6358 2172 110 7 3 chr2 152266895 152267203 -100989380 + AluSc SINE Alu 1 309 0 2191 275 67 50 chr2 152267203 152267729 -100988854 + L1MEc LINE L1 38 554 -5842 1973 136 3 3 chr2 152267729 152268024 -100988559 - AluSx SINE Alu -17 295 1 2191 275 67 50 chr2 152268024 152268684 -100987899 + L1MEc LINE L1 554 1250 -5146 201 94 0 0 chr2 152268790 152268822 -100987761 + (TA)n Simple_repeat Simple_repeat 1 32 0 322 305 30 24 chr2 152269415 152269582 -100987001 + L1MB5 LINE L1 5318 5485 -2323 1501 147 94 18 chr2 152269668 152269954 -100986629 - AluSc SINE Alu -1 308 1 524 300 40 48 chr2 152270258 152270734 -100985849 - L1MCc LINE L1 -4766 2175 1704 22 0 0 0 chr2 152270778 152270800 -100985783 + AT_rich Low_complexity Low_complexity 1 22 0 1423 283 92 6 chr2 152270880 152271550 -100985033 - L1MCc LINE L1 -4851 1571 839 365 315 67 27 chr2 152272184 152272333 -100984250 + MIR SINE MIR 20 174 -88 203 321 57 57 chr2 152272402 152272561 -100984022 + MIR SINE MIR 76 234 -28 351 0 0 0 chr2 152272731 152272770 -100983813 + (CA)n Simple_repeat Simple_repeat 2 40 0 13940 208 46 9 chr2 152273166 152279246 -100977337 + L1P5 LINE L1 6 6504 -363 316 164 0 0 chr2 152279359 152279414 -100977169 - L1MDb LINE L1 -5484 596 542 363 319 8 9 chr2 152279449 152279620 -100976963 - L1MDb LINE L1 -5512 571 391 2143 186 109 6 chr2 152279885 152280364 -100976219 + L1MB5 LINE L1 5640 6167 -7 4647 194 35 21 chr2 152280481 152280653 -100975930 - L1 LINE L1 -2446 3700 3532 186 43 0 0 chr2 152280653 152280676 -100975907 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 4647 194 35 21 chr2 152280676 152281502 -100975081 - L1 LINE L1 -2614 3532 2683 2269 98 3 0 chr2 152281502 152281808 -100974775 + AluY SINE Alu 2 308 -3 4647 194 35 21 chr2 152281808 152281904 -100974679 - L1 LINE L1 -3463 2683 2590 344 347 84 73 chr2 152282674 152283057 -100973526 - L2 LINE L2 0 3272 2886 1881 172 31 0 chr2 152283190 152283544 -100973039 - MLT1A1 LTR MaLR 0 365 1 2386 36 4 0 chr2 152283960 152284239 -100972344 - AluY SINE Alu -17 294 15 770 81 16 24 chr2 152284339 152284482 -100972101 + L1PA4 LINE L1 6028 6155 0 381 282 19 0 chr2 152284483 152284586 -100971997 + L1MEc LINE L1 1649 1753 -4643 1186 208 45 95 chr2 152284898 152285426 -100971157 + L1MEc LINE L1 2603 3104 -3111 5222 41 11 0 chr2 152285690 152286717 -100969866 - L1PA5 LINE L1 -269 5885 4849 1258 43 37 0 chr2 152286706 152286869 -100969714 + L1P LINE L1 4490 4658 -1488 * 384 59 0 0 chr2 152288623 152288674 -100967909 + (TG)n Simple_repeat Simple_repeat 2 52 0 1982 106 46 10 chr2 152288770 152289072 -100967511 - AluSq SINE Alu 0 313 1 3873 45 0 43 chr2 152290539 152291056 -100965527 + L1PA4 LINE L1 5659 6153 -2 2183 108 0 3 chr2 152291723 152292018 -100964565 + AluY SINE Alu 1 294 -17 2405 225 59 74 chr2 152292146 152293185 -100963398 - L1ME1 LINE L1 -11 6224 5209 255 72 72 14 chr2 152293209 152293278 -100963305 + (TA)n Simple_repeat Simple_repeat 2 74 0 439 275 18 24 chr2 152293323 152293490 -100963093 - L1ME1 LINE L1 -1051 5164 4999 364 269 58 94 chr2 152293512 152293787 -100962796 + MLT1E-int LTR MaLR 1107 1371 0 434 297 18 0 chr2 152293840 152293951 -100962632 + MLT1E LTR MaLR 82 194 -373 745 283 40 28 chr2 152294008 152294259 -100962324 + MLT1E LTR MaLR 335 588 -5 762 259 15 10 chr2 152294264 152294469 -100962114 - L1ME1 LINE L1 -1217 4998 4793 * 1135 336 26 43 chr2 152294463 152295160 -100961423 - L1ME1 LINE L1 -5677 719 35 773 267 5 0 chr2 152295611 152295798 -100960785 - MER5A DNA MER1_type -1 188 1 494 239 104 71 chr2 152295982 152296250 -100960333 + LTR16A1 LTR ERVL 181 457 0 408 200 0 0 chr2 152297590 152297675 -100958908 + (TATATG)n Simple_repeat Simple_repeat 3 87 0 246 273 20 20 chr2 152297939 152298089 -100958494 + (TA)n Simple_repeat Simple_repeat 2 151 0 3509 212 54 36 chr2 152298271 152299725 -100956858 + L1MB8 LINE L1 4668 6129 -49 288 247 27 0 chr2 152300155 152300228 -100956355 - MIR SINE MIR 0 262 188 266 0 29 0 chr2 152301708 152301742 -100954841 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 300 277 75 89 chr2 152304220 152304433 -100952150 + L2 LINE L2 3088 3297 -16 551 277 22 0 chr2 152305167 152305304 -100951279 + Charlie8 DNA MER1_type 1 140 -2277 345 151 0 0 chr2 152306210 152306263 -100950320 - MER63 DNA MER1_type -383 53 1 218 129 0 65 chr2 152311548 152311610 -100944973 + (TA)n Simple_repeat Simple_repeat 2 59 0 284 93 0 67 chr2 152311724 152311799 -100944784 + (GAAA)n Simple_repeat Simple_repeat 2 71 0 21 57 0 0 chr2 152314684 152314719 -100941864 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr2 152317308 152317330 -100939253 + AT_rich Low_complexity Low_complexity 1 22 0 253 170 0 19 chr2 152317488 152317541 -100939042 + Alu SINE Alu 251 302 0 315 122 0 0 chr2 152317564 152317613 -100938970 + (CA)n Simple_repeat Simple_repeat 2 50 0 199 189 0 0 chr2 152318037 152318074 -100938509 + MIR SINE MIR 104 140 -122 311 242 98 45 chr2 152318169 152318301 -100938282 + MARNA DNA Mariner 435 573 -13 506 194 194 0 chr2 152318323 152318457 -100938126 + MLT1A1 LTR MaLR 9 168 -197 7152 44 9 1 chr2 152318470 152319365 -100937218 - L1PA4 LINE L1 0 6155 5254 23 54 0 0 chr2 152319919 152319956 -100936627 + AT_rich Low_complexity Low_complexity 1 37 0 33 80 0 0 chr2 152320313 152320388 -100936195 + AT_rich Low_complexity Low_complexity 1 75 0 25 0 0 0 chr2 152324071 152324096 -100932487 + AT_rich Low_complexity Low_complexity 1 25 0 213 302 32 0 chr2 152324688 152324751 -100931832 - MIR SINE MIR -101 161 97 219 395 19 81 chr2 152324970 152325231 -100931352 - L2 LINE L2 -80 3192 2948 349 322 150 30 chr2 152327541 152327774 -100928809 + MIR SINE MIR 2 262 0 389 274 14 62 chr2 152328115 152328261 -100928322 + L2 LINE L2 3175 3313 0 204 374 28 39 chr2 152328822 152329004 -100927579 + MER5A DNA MER1_type 9 188 -1 1970 146 7 0 chr2 152329163 152329464 -100927119 + AluSx SINE Alu 7 309 -3 5755 244 32 39 chr2 152329484 152330991 -100925592 + L1M4b LINE L1 14 1509 -5350 1355 136 144 19 chr2 152330981 152331245 -100925338 + L1PA16 LINE L1 5861 6157 -9 * 364 179 0 63 chr2 152331233 152331328 -100925255 + L1M4b LINE L1 1487 1575 -5284 * 26 0 0 0 chr2 152431499 152431525 -100825058 + AT_rich Low_complexity Low_complexity 1 26 0 1650 127 4 0 chr2 152431525 152431753 -100824830 - AluSx SINE Alu -25 287 59 27 0 0 0 chr2 152431891 152431918 -100824665 + AT_rich Low_complexity Low_complexity 1 27 0 1176 234 87 7 chr2 152432216 152432515 -100824068 - MER2 DNA MER2_type 0 345 23 308 169 65 39 chr2 152432987 152433064 -100823519 - AluSp SINE Alu -122 181 103 1071 256 244 30 chr2 152433196 152433601 -100822982 + L2 LINE L2 1951 2268 -1046 2156 107 3 0 chr2 152433601 152433900 -100822683 - AluSx SINE Alu -12 300 1 1071 256 244 30 chr2 152433900 152434032 -100822551 + L2 LINE L2 2268 2603 -711 1591 123 5 0 chr2 152434037 152434256 -100822327 - AluSg/x SINE Alu -18 294 75 223 362 143 0 chr2 152434469 152434574 -100822009 - MER5A DNA MER1_type -43 146 27 253 235 29 0 chr2 152434619 152434687 -100821896 - L1 LINE L1 -3655 2491 2422 237 65 0 0 chr2 152435176 152435207 -100821376 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 7971 127 8 41 chr2 152435681 152437020 -100819563 - Tigger1 DNA MER2_type -1123 1295 2 1993 117 48 0 chr2 152437020 152437310 -100819273 + AluSg SINE Alu 1 304 -6 3184 146 30 2 chr2 152437533 152438067 -100818516 + Tigger1 DNA MER2_type 1855 2403 -15 373 115 0 0 chr2 152438077 152438129 -100818454 + MLT2D LTR ERVL 363 414 0 343 224 12 0 chr2 152438130 152438215 -100818368 + L1MC4 LINE L1 7573 7658 -384 297 256 178 16 chr2 152438241 152438370 -100818213 + L1MC4 LINE L1 7743 7892 -150 347 227 23 78 chr2 152438481 152438609 -100817974 + L1MC4 LINE L1 7922 8042 0 902 265 147 29 chr2 152438668 152438818 -100817765 + L1MC4a LINE L1 5351 5482 -2326 875 278 97 46 chr2 152438818 152439314 -100817269 + LTR33 LTR ERVL 1 521 0 902 265 147 29 chr2 152439314 152439680 -100816903 + L1MC4a LINE L1 5482 5928 -1880 282 205 51 13 chr2 152439704 152439782 -100816801 + (CATATA)n Simple_repeat Simple_repeat 3 83 0 24 32 0 0 chr2 152441565 152441596 -100814987 + AT_rich Low_complexity Low_complexity 1 31 0 565 231 35 7 chr2 152442120 152442263 -100814320 - MER69 DNA AcHobo 0 2526 2380 1049 101 7 0 chr2 152442719 152442868 -100813715 + AluSg/x SINE Alu 161 310 -2 754 281 49 65 chr2 152442924 152443328 -100813255 - L1MC4 LINE L1 -569 7473 7081 1545 261 72 64 chr2 152443328 152443984 -100812599 - MLT2F LTR ERVL 0 663 3 754 281 49 65 chr2 152443984 152444191 -100812392 - L1MC4 LINE L1 -961 7081 6872 4359 50 2 2 chr2 152444193 152444729 -100811854 + L1PA7 LINE L1 5612 6147 -7 30 27 0 0 chr2 152444872 152444909 -100811674 + AT_rich Low_complexity Low_complexity 1 37 0 511 271 116 5 chr2 152445201 152445408 -100811175 + L2 LINE L2 3084 3313 0 265 286 71 27 chr2 152446981 152447093 -100809490 - MIR SINE MIR -98 164 48 460 309 103 22 chr2 152447141 152447413 -100809170 - L2 LINE L2 -438 2876 2583 558 300 0 26 chr2 152449359 152449592 -100806991 + AluSg1 SINE Alu 1 227 -82 1802 100 4 20 chr2 152449975 152450225 -100806358 + AluSg SINE Alu 53 298 -12 2221 125 0 0 chr2 152450460 152450772 -100805811 - AluSx SINE Alu 0 312 1 839 234 22 5 chr2 152450820 152451004 -100805579 + MER5A DNA MER1_type 3 189 0 21 0 0 0 chr2 152452103 152452124 -100804459 + AT_rich Low_complexity Low_complexity 1 21 0 222 62 0 0 chr2 152452733 152452765 -100803818 + (T)n Simple_repeat Simple_repeat 1 32 0 2021 115 0 23 chr2 152452828 152453133 -100803450 - AluSx SINE Alu -14 298 1 1879 117 4 4 chr2 152453289 152453554 -100803029 + AluSx SINE Alu 3 267 -45 2479 72 0 0 chr2 152453677 152453983 -100802600 - AluY SINE Alu -5 306 1 432 51 0 0 chr2 152454707 152454766 -100801817 + (GA)n Simple_repeat Simple_repeat 2 60 0 409 281 93 0 chr2 152454878 152454988 -100801595 + MIR SINE MIR 6 133 -129 230 0 0 32 chr2 152454988 152455019 -100801564 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 409 281 93 0 chr2 152455019 152455047 -100801536 + MIR SINE MIR 133 157 -105 274 146 0 0 chr2 152455065 152455106 -100801477 - Alu SINE Alu -258 43 3 1863 159 0 17 chr2 152455406 152455707 -100800876 - AluSx SINE Alu -16 296 1 719 206 109 0 chr2 152456327 152456492 -100800091 + MER5A DNA MER1_type 7 189 0 230 209 70 0 chr2 152456503 152456546 -100800037 + MER5B DNA MER1_type 1 46 -132 1655 187 24 18 chr2 152456690 152457021 -100799562 + MLT1A1 LTR MaLR 1 333 -32 720 235 24 0 chr2 152457175 152457345 -100799238 - MER5A DNA MER1_type 0 189 16 2100 124 0 17 chr2 152457358 152457705 -100798878 - L1P LINE L1 -851 5295 4955 3439 188 24 17 chr2 152457818 152458573 -100798010 - L1P LINE L1 -948 5198 4439 * 5900 94 12 9 chr2 152458567 152459420 -100797163 + L1PA10 LINE L1 5312 6166 -2 407 268 21 0 chr2 152459630 152459727 -100796856 - MER58 DNA MER1_type -2316 104 6 202 353 59 0 chr2 152460833 152460918 -100795665 - L2 LINE L2 -50 3222 3133 188 86 29 0 chr2 152461056 152461091 -100795492 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 253 382 105 40 chr2 152461530 152462304 -100794279 + L2 LINE L2 2152 2975 -339 752 304 94 48 chr2 152463030 152463570 -100793013 + L1MEc LINE L1 364 928 -5793 208 244 19 56 chr2 152463742 152463902 -100792681 + A-rich Low_complexity Low_complexity 3 156 0 1162 256 44 33 chr2 152463905 152464362 -100792221 + L1M4 LINE L1 3426 3887 -2259 710 239 60 0 chr2 152464394 152464561 -100792022 + MER58A DNA MER1_type 37 213 -11 2375 48 0 17 chr2 152464561 152464851 -100791732 + AluY SINE Alu 2 286 -25 970 269 86 39 chr2 152464904 152465554 -100791029 + L1M4 LINE L1 4154 4834 -1312 461 283 71 1 chr2 152466044 152466257 -100790326 + L1MEc LINE L1 1719 1908 -4632 1803 145 47 14 chr2 152466331 152466628 -100789955 - AluSx SINE Alu -5 307 1 932 241 141 53 chr2 152467256 152467937 -100788646 - L1MC4 LINE L1 0 8042 7302 496 224 90 0 chr2 152467937 152468093 -100788490 - L1ME3A LINE L1 -163 6007 5838 1934 128 0 47 chr2 152468517 152468836 -100787747 - AluSx SINE Alu 0 305 1 939 314 100 28 chr2 152469553 152470024 -100786559 + MLT1G1 LTR MaLR 69 573 -22 24 32 0 0 chr2 152470405 152470436 -100786147 + AT_rich Low_complexity Low_complexity 1 31 0 204 40 0 0 chr2 152470453 152470478 -100786105 + (TG)n Simple_repeat Simple_repeat 2 26 0 329 335 35 18 chr2 152470547 152470717 -100785866 + L1MA8 LINE L1 5255 5427 -2381 2566 51 0 3 chr2 152470856 152471167 -100785416 - AluY SINE Alu 0 311 2 2045 95 10 10 chr2 152471168 152471463 -100785120 - AluSx SINE Alu -17 295 1 23 0 0 0 chr2 152472365 152472388 -100784195 + AT_rich Low_complexity Low_complexity 1 23 0 3188 270 78 34 chr2 152472559 152474168 -100782415 + L1MEc LINE L1 43 1721 -4675 1835 178 46 22 chr2 152474184 152474599 -100781984 + L1MA8 LINE L1 5867 6291 0 26 0 0 0 chr2 152474772 152474798 -100781785 + AT_rich Low_complexity Low_complexity 1 26 0 22 35 0 0 chr2 152475291 152475320 -100781263 + AT_rich Low_complexity Low_complexity 1 29 0 195 42 0 0 chr2 152475424 152475448 -100781135 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1125 210 21 34 chr2 152478172 152478410 -100778173 + AluJo SINE Alu 1 235 -77 4111 135 51 48 chr2 152478464 152479247 -100777336 + LTR1 LTR ERV1 1 785 0 357 148 0 0 chr2 152479247 152479308 -100777275 + AluJo SINE Alu 238 298 -4 24 0 0 0 chr2 152479581 152479605 -100776978 + AT_rich Low_complexity Low_complexity 1 24 0 353 133 0 120 chr2 152480144 152480302 -100776281 + (TTTTTA)n Simple_repeat Simple_repeat 6 144 0 312 70 0 0 chr2 152480352 152480395 -100776188 + (TA)n Simple_repeat Simple_repeat 2 44 0 405 0 0 0 chr2 152480900 152480945 -100775638 + (TA)n Simple_repeat Simple_repeat 1 45 0 4528 180 38 8 chr2 152481047 152482508 -100774075 + L1MA9 LINE L1 4681 6292 -20 2457 278 122 17 chr2 152482686 152483824 -100772759 - L1MEc LINE L1 -5022 1374 117 342 0 0 0 chr2 152484313 152484351 -100772232 + (TA)n Simple_repeat Simple_repeat 1 38 0 282 73 0 0 chr2 152484351 152484392 -100772191 + (GA)n Simple_repeat Simple_repeat 1 41 0 474 61 0 0 chr2 152484818 152484884 -100771699 + (TGGA)n Simple_repeat Simple_repeat 1 66 0 2193 121 0 0 chr2 152484891 152485189 -100771394 - AluSx SINE Alu -14 298 1 560 319 177 43 chr2 152485240 152485804 -100770779 - L2 LINE L2 -806 2508 1869 2368 86 0 0 chr2 152485844 152486146 -100770437 - AluY SINE Alu -9 302 1 2297 114 0 0 chr2 152486220 152486526 -100770057 - AluSc SINE Alu -3 306 1 343 349 42 33 chr2 152486533 152486748 -100769835 - L1MC/D LINE L1 -2025 5783 5567 390 200 0 0 chr2 152487280 152487345 -100769238 + L2 LINE L2 3204 3268 -4 213 292 56 14 chr2 152489228 152489300 -100767283 - MIR SINE MIR -109 153 79 378 0 0 0 chr2 152489343 152489385 -100767198 + (CA)n Simple_repeat Simple_repeat 2 43 0 293 200 150 0 chr2 152489867 152489967 -100766616 - L1M4 LINE L1 -1924 4222 4108 1151 272 72 28 chr2 152489971 152490772 -100765811 - L1M4 LINE L1 -2193 3953 3117 253 252 82 57 chr2 152490810 152490969 -100765614 - L1M4 LINE L1 -3127 3019 2857 786 242 0 30 chr2 152490981 152491179 -100765404 + MER3 DNA MER1_type 18 209 0 248 211 0 0 chr2 152493155 152493207 -100763376 + LTR30 LTR ERV1 1 52 -670 2103 142 303 106 chr2 152493209 152494047 -100762536 + pTR5 LTR ERV1 1436 2438 0 1707 189 77 0 chr2 152494248 152494571 -100762012 + MER7A DNA MER2_type 1 346 0 22 0 0 0 chr2 152494704 152494726 -100761857 + GC_rich Low_complexity Low_complexity 1 22 0 1938 134 3 7 chr2 152494770 152495054 -100761529 + AluSc SINE Alu 1 283 -26 268 218 32 8 chr2 152495919 152496043 -100760540 + (TA)n Simple_repeat Simple_repeat 2 128 0 221 308 44 11 chr2 152496651 152496742 -100759841 - MIR SINE MIR -78 184 91 308 301 87 48 chr2 152498502 152498708 -100757875 + MLT1I LTR MaLR 196 409 0 1407 210 95 20 chr2 152498787 152499135 -100757448 - MLT1A2 LTR MaLR 0 374 1 558 330 43 9 chr2 152499291 152499524 -100757059 + MIR SINE MIR 9 249 -13 21 0 0 0 chr2 152499529 152499550 -100757033 + AT_rich Low_complexity Low_complexity 1 21 0 257 320 90 13 chr2 152499940 152500096 -100756487 + MIR SINE MIR 95 262 0 361 106 0 0 chr2 152502298 152502345 -100754238 + MER8 DNA MER2_type 193 239 0 305 254 16 0 chr2 152502784 152502847 -100753736 - L2 LINE L2 -31 3241 3178 2354 112 0 0 chr2 152503026 152503338 -100753245 + AluSq SINE Alu 1 312 -1 1338 219 171 25 chr2 152503428 152503596 -100752987 - MLT1D LTR MaLR -3 502 360 1202 119 109 14 chr2 152503596 152503806 -100752777 - MER30 DNA MER1_type 0 230 1 1338 219 171 25 chr2 152503806 152504075 -100752508 - MLT1D LTR MaLR -145 360 1 1575 210 31 26 chr2 152504126 152504478 -100752105 + MLT1A1 LTR MaLR 12 365 0 2481 147 15 21 chr2 152505066 152505501 -100751082 - MLT2C2 LTR ERVL -40 480 1 1409 194 103 29 chr2 152506384 152506734 -100749849 - MLT2D LTR ERVL -38 376 1 2187 128 13 13 chr2 152508847 152509222 -100747361 - L1PB1 LINE L1 -1 6150 5776 443 146 0 11 chr2 152509222 152509311 -100747272 + (CA)n Simple_repeat Simple_repeat 2 89 0 3730 146 12 10 chr2 152509311 152510514 -100746069 - L1PB1 LINE L1 -369 5782 4582 347 255 10 10 chr2 152510514 152510612 -100745971 + LTR41 LTR ERVL 90 187 -586 220 80 0 40 chr2 152511215 152511265 -100745318 + (TA)n Simple_repeat Simple_repeat 1 48 0 22 56 0 0 chr2 152511266 152511302 -100745281 + AT_rich Low_complexity Low_complexity 1 36 0 249 359 44 50 chr2 152511514 152511812 -100744771 - L1MEd LINE L1 -5516 603 308 358 266 91 26 chr2 152513496 152513650 -100742933 - L1ME4a LINE L1 -3 6118 5955 298 184 0 0 chr2 152514348 152514397 -100742186 - L2 LINE L2 -4 3309 3261 21 36 0 0 chr2 152514453 152514481 -100742102 + AT_rich Low_complexity Low_complexity 1 28 0 551 274 74 23 chr2 152515015 152515230 -100741353 + MIR SINE MIR 37 262 0 193 307 120 27 chr2 152515306 152515381 -100741202 - MIR SINE MIR -89 119 38 3224 94 8 11 chr2 152516511 152516989 -100739594 + L1PA14 LINE L1 5685 6161 0 1145 274 160 15 chr2 152517517 152517814 -100738769 - L1MC4 LINE L1 -1048 6994 6742 2032 167 30 0 chr2 152517814 152518150 -100738433 - MER7A DNA MER2_type -1 345 2 1145 274 160 15 chr2 152518150 152518320 -100738263 - L1MC4 LINE L1 -1300 6742 6459 2599 109 0 11 chr2 152518324 152518692 -100737891 - THE1B LTR MaLR 0 364 1 651 139 108 0 chr2 152519116 152519244 -100737339 + MER58C DNA MER1_type 64 212 -3 2346 95 3 0 chr2 152519865 152520169 -100736414 + AluSp SINE Alu 1 305 -8 32 0 0 0 chr2 152521095 152521127 -100735456 + AT_rich Low_complexity Low_complexity 1 32 0 746 332 12 4 chr2 152521955 152522214 -100734369 + MIR SINE MIR 2 262 0 180 77 0 0 chr2 152523213 152523239 -100733344 + (A)n Simple_repeat Simple_repeat 1 26 0 2281 110 3 0 chr2 152523578 152523887 -100732696 + AluSq SINE Alu 4 313 0 182 372 29 15 chr2 152523927 152524064 -100732519 + MIR3 SINE MIR 1 139 -69 25 0 0 0 chr2 152524112 152524137 -100732446 + AT_rich Low_complexity Low_complexity 1 25 0 547 292 54 11 chr2 152524306 152524491 -100732092 + MIR SINE MIR 34 226 -36 599 330 114 6 chr2 152524520 152524878 -100731705 - L2 LINE L2 -516 2798 2402 898 274 44 58 chr2 152524882 152525317 -100731266 + LTR16A LTR ERVL 16 444 -6 1076 318 87 34 chr2 152525346 152526251 -100730332 + HERV16 LTR ERVL 25 977 -4019 237 239 0 0 chr2 152526400 152526446 -100730137 + (CATA)n Simple_repeat Simple_repeat 1 46 0 464 190 20 10 chr2 152526637 152526737 -100729846 - MLT1E3 LTR MaLR -457 167 67 3806 199 47 19 chr2 152526862 152526983 -100729600 + L1MB8 LINE L1 5184 5300 -878 2501 58 0 0 chr2 152526983 152527278 -100729305 + AluY SINE Alu 1 295 -16 3806 199 47 19 chr2 152527278 152528121 -100728462 + L1MB8 LINE L1 5300 6172 -6 186 43 0 0 chr2 152528127 152528150 -100728433 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 351 223 58 93 chr2 152528581 152528720 -100727863 + LTR16A LTR ERVL 282 415 -35 1436 203 7 38 chr2 152528795 152529086 -100727497 + AluJb SINE Alu 1 282 -30 212 0 36 0 chr2 152529098 152529126 -100727457 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 2226 108 3 0 chr2 152529782 152530070 -100726513 + AluSx SINE Alu 6 294 -18 307 225 79 34 chr2 152530232 152530321 -100726262 - Charlie8 DNA MER1_type -2143 274 182 1869 138 0 35 chr2 152530335 152530618 -100725965 - AluSx SINE Alu -39 273 1 757 198 130 34 chr2 152530714 152530921 -100725662 - MLT1A2 LTR MaLR -63 311 85 369 354 20 20 chr2 152531481 152531628 -100724955 + L2 LINE L2 3125 3271 -1 321 26 0 0 chr2 152533438 152533476 -100723107 + (CA)n Simple_repeat Simple_repeat 1 38 0 264 59 0 0 chr2 152533476 152533510 -100723073 + (GA)n Simple_repeat Simple_repeat 1 34 0 201 195 0 24 chr2 152533700 152533741 -100722842 + L2 LINE L2 3270 3309 -4 39 38 0 0 chr2 152534110 152534163 -100722420 + AT_rich Low_complexity Low_complexity 1 53 0 303 250 0 0 chr2 152534338 152534438 -100722145 + (TA)n Simple_repeat Simple_repeat 2 101 0 21 36 0 0 chr2 152534973 152535001 -100721582 + AT_rich Low_complexity Low_complexity 1 28 0 589 323 40 22 chr2 152535420 152535646 -100720937 - MIR SINE MIR -24 238 9 48 0 0 0 chr2 152535963 152536011 -100720572 + AT_rich Low_complexity Low_complexity 1 48 0 357 82 0 0 chr2 152536218 152536267 -100720316 + (CA)n Simple_repeat Simple_repeat 2 50 0 199 291 55 18 chr2 152536337 152536447 -100720136 - L2 LINE L2 -82 3231 3118 235 304 177 39 chr2 152536666 152537051 -100719532 + L1MC/D LINE L1 5350 5787 -2021 1173 138 98 80 chr2 152537058 152537333 -100719250 + MLT1B LTR MaLR 3 282 -108 1019 236 165 65 chr2 152537338 152537473 -100719110 - LTR50 LTR ERVL -222 573 453 1120 217 42 0 chr2 152537473 152537736 -100718847 - ORSL DNA AcHobo -1 274 1 1019 236 165 65 chr2 152537736 152538121 -100718462 - LTR50 LTR ERVL -342 453 1 221 236 0 0 chr2 152538227 152538282 -100718301 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 312 330 128 34 chr2 152538602 152538960 -100717623 + L2 LINE L2 2829 3227 -86 204 125 0 0 chr2 152539013 152539045 -100717538 + (TGGA)n Simple_repeat Simple_repeat 2 33 0 1120 156 98 40 chr2 152539385 152539532 -100717051 - MSTA LTR MaLR 0 428 262 5244 167 25 30 chr2 152539532 152540608 -100715975 - MER11C LTR ERVK 0 1071 1 1120 156 98 40 chr2 152540608 152540685 -100715898 - MSTA LTR MaLR -166 262 191 6368 88 14 3 chr2 152540686 152542061 -100714522 - L1PA10 LINE L1 0 6174 4753 304 196 3 1 chr2 152542061 152542142 -100714441 - THE1C LTR MaLR -187 177 103 * 864 167 131 20 chr2 152542112 152542310 -100714273 - MSTA LTR MaLR -208 220 1 1298 112 5 15 chr2 152542536 152542741 -100713842 + L1PB2 LINE L1 5947 6149 -2 278 345 51 102 chr2 152543092 152543347 -100713236 - L2 LINE L2 -14 3258 3017 606 294 81 18 chr2 152543348 152543744 -100712839 + L1ME LINE L1 701 1153 -4985 692 194 16 0 chr2 152544714 152544838 -100711745 + FLAM_A SINE Alu 5 130 -3 718 89 0 45 chr2 152545077 152545220 -100711363 - AluY SINE Alu 0 315 178 1498 88 0 0 chr2 152545535 152545716 -100710867 - AluY SINE Alu -128 183 3 741 274 54 73 chr2 152546080 152546489 -100710094 - LTR41 LTR ERVL -6 767 367 * 849 262 68 81 chr2 152546487 152546929 -100709654 - LTR41 LTR ERVL -337 436 1 1982 97 7 35 chr2 152546987 152547303 -100709280 - AluSg SINE Alu 0 308 1 2234 119 0 3 chr2 152547470 152547773 -100708810 + AluSx SINE Alu 3 304 -8 185 378 14 0 chr2 152548075 152548149 -100708434 - MIR SINE MIR -168 94 20 189 0 0 0 chr2 152549437 152549458 -100707125 + (T)n Simple_repeat Simple_repeat 1 21 0 21 0 0 0 chr2 152549866 152549887 -100706696 + AT_rich Low_complexity Low_complexity 1 21 0 2636 101 8 16 chr2 152550253 152550631 -100705952 + THE1C LTR MaLR 1 375 0 2316 94 0 0 chr2 152551434 152551743 -100704840 + AluY SINE Alu 1 309 -2 1146 157 22 0 chr2 152552110 152552295 -100704288 - MER5A DNA MER1_type 0 189 1 916 161 4 128 chr2 152552881 152553123 -100703460 - AluJo SINE Alu -14 298 87 285 208 52 10 chr2 152553575 152553671 -100702912 - L1ME4a LINE L1 -15 6106 6007 2161 134 0 3 chr2 152553815 152554128 -100702455 - AluSx SINE Alu 0 312 1 469 83 0 167 chr2 152554943 152555039 -100701544 - MADE1 DNA Mariner 0 80 1 229 308 0 0 chr2 152556977 152557042 -100699541 + (TA)n Simple_repeat Simple_repeat 1 65 0 292 319 84 31 chr2 152557208 152557399 -100699184 + MIR SINE MIR 56 256 -6 226 0 59 0 chr2 152558546 152558580 -100698003 + (TC)n Simple_repeat Simple_repeat 1 36 0 861 152 0 0 chr2 152559085 152559217 -100697366 + FLAM_C SINE Alu 1 132 -1 324 0 0 0 chr2 152559253 152559289 -100697294 + (CA)n Simple_repeat Simple_repeat 2 37 0 256 47 23 23 chr2 152560295 152560338 -100696245 + (TC)n Simple_repeat Simple_repeat 2 44 0 596 356 40 0 chr2 152562177 152562402 -100694181 + L2 LINE L2 2700 2933 -381 1019 258 0 8 chr2 152562402 152562642 -100693941 - L1M4 LINE L1 -6289 253 16 398 209 18 27 chr2 152562666 152562776 -100693807 - Charlie1 DNA MER1_type -455 2306 2198 295 270 14 14 chr2 152562815 152562889 -100693694 - L2 LINE L2 -1 3312 3239 255 325 12 0 chr2 152562893 152562973 -100693610 - L2 LINE L2 -275 3038 2958 1887 231 39 18 chr2 152562973 152563518 -100693065 + L1M4 LINE L1 2226 2781 -3365 720 157 91 39 chr2 152563581 152563811 -100692772 + Charlie1 DNA MER1_type 2520 2761 0 21 0 0 0 chr2 152565048 152565069 -100691514 + AT_rich Low_complexity Low_complexity 1 21 0 2564 52 0 7 chr2 152566291 152566597 -100689986 + AluY SINE Alu 1 304 -7 203 226 157 59 chr2 152568312 152568414 -100688169 + MIR SINE MIR 90 201 -61 2661 64 64 0 chr2 152568781 152569126 -100687457 + LTR17 LTR ERV1 414 780 0 16952 66 19 7 chr2 152569126 152569949 -100686634 + HERV17 LTR ERV1 1 813 -7813 311 22 65 0 chr2 152569949 152569995 -100686588 + A-rich Low_complexity Low_complexity 2 50 0 16952 66 19 7 chr2 152569995 152571364 -100685219 + HERV17 LTR ERV1 813 2219 -6407 398 317 28 21 chr2 152571396 152571541 -100685042 + MER5A DNA MER1_type 35 180 -9 307 324 39 0 chr2 152571538 152571640 -100684943 + L2 LINE L2 3208 3313 0 * 718 242 22 62 chr2 152573105 152573283 -100683300 + MER5A DNA MER1_type 19 189 0 27 29 0 0 chr2 152573365 152573399 -100683184 + AT_rich Low_complexity Low_complexity 1 34 0 535 229 9 0 chr2 152573415 152573524 -100683059 - MIR SINE MIR -130 132 23 897 254 39 50 chr2 152573767 152574228 -100682355 - L1MC5 LINE L1 -51 7910 7455 988 242 14 0 chr2 152574280 152574499 -100682084 - MER58A DNA MER1_type -1 223 2 513 206 44 15 chr2 152574499 152574635 -100681948 - L1MC5 LINE L1 -523 7438 7299 210 192 23 64 chr2 152574671 152574843 -100681740 + (CATATA)n Simple_repeat Simple_repeat 4 168 0 429 144 4 71 chr2 152574851 152575106 -100681477 + (CATA)n Simple_repeat Simple_repeat 1 237 0 273 239 28 18 chr2 152575109 152575218 -100681365 + (TA)n Simple_repeat Simple_repeat 1 110 0 1710 206 62 64 chr2 152575347 152575955 -100680628 - L1MC5 LINE L1 -741 7220 6614 640 178 93 16 chr2 152576001 152576130 -100680453 + AluJo SINE Alu 1 139 -173 471 263 146 84 chr2 152576143 152576412 -100680171 - L1MC4a LINE L1 -1291 6517 6266 857 217 19 14 chr2 152576412 152576619 -100679964 - MER3 DNA MER1_type 0 209 2 471 263 146 84 chr2 152576619 152576930 -100679653 - L1MC4a LINE L1 -1542 6266 5901 233 318 68 61 chr2 152578588 152578736 -100677847 - MIR3 SINE MIR -30 178 30 349 272 122 39 chr2 152579266 152579446 -100677137 - MIR SINE MIR -18 244 50 2034 123 30 3 chr2 152579855 152580155 -100676428 - AluSg SINE Alu -2 308 1 26 50 0 0 chr2 152580231 152580271 -100676312 + AT_rich Low_complexity Low_complexity 1 40 0 1320 224 54 12 chr2 152582197 152582532 -100674051 + MLT1D LTR MaLR 157 505 0 301 336 33 25 chr2 152582532 152582654 -100673929 + MIR SINE MIR 10 132 -130 197 309 92 46 chr2 152582757 152582909 -100673674 - MIR SINE MIR -6 256 98 1722 178 3 7 chr2 152583422 152583709 -100672874 + AluJb SINE Alu 1 286 -26 254 371 14 43 chr2 152584224 152584364 -100672219 - MIR3 SINE MIR -66 142 7 1229 203 31 14 chr2 152584761 152585047 -100671536 - MER34B LTR ERV1 0 565 275 2172 107 47 28 chr2 152585047 152585411 -100671172 + Tigger2a DNA MER2_type 1 371 -63 1818 187 0 16 chr2 152585414 152585730 -100670853 + AluJb SINE Alu 1 311 -1 189 0 0 0 chr2 152585735 152585756 -100670827 + (GAAAA)n Simple_repeat Simple_repeat 3 23 0 * 339 65 0 0 chr2 152585755 152585801 -100670782 + (GGGA)n Simple_repeat Simple_repeat 4 49 0 360 165 0 89 chr2 152585832 152585911 -100670672 + Tigger2a DNA MER2_type 361 432 -2 1089 177 33 81 chr2 152585932 152586203 -100670380 - MER34B LTR ERV1 -297 268 11 443 254 31 83 chr2 152586225 152586418 -100670165 - MIR SINE MIR 0 262 80 396 211 16 109 chr2 152586690 152586818 -100669765 + L2 LINE L2 3197 3312 -1 1063 276 39 44 chr2 152586937 152587308 -100669275 + MLT1J2 LTR MaLR 20 390 -60 1683 191 73 0 chr2 152587308 152587648 -100668935 - MLT1A1 LTR MaLR 0 365 1 1063 276 39 44 chr2 152587648 152587685 -100668898 + MLT1J2 LTR MaLR 390 426 -24 234 410 78 17 chr2 152589049 152589344 -100667239 + L2 LINE L2 2946 3258 -14 5747 200 48 26 chr2 152589360 152590141 -100666442 + Charlie1a DNA MER1_type 6 768 -1993 1494 284 22 7 chr2 152590141 152590598 -100665985 - LTR16B LTR ERVL 0 464 1 5747 200 48 26 chr2 152590598 152591156 -100665427 + Charlie1a DNA MER1_type 768 1380 -1381 542 125 0 0 chr2 152591156 152591236 -100665347 + MADE1 DNA Mariner 1 80 0 5747 200 48 26 chr2 152591236 152591309 -100665274 + Charlie1a DNA MER1_type 1380 1450 -5 370 333 104 13 chr2 152591385 152591616 -100664967 + MIR SINE MIR 8 259 -3 183 188 0 0 chr2 152591738 152591770 -100664813 - MER5A DNA MER1_type -22 167 136 1105 245 71 34 chr2 152591779 152592311 -100664272 + L1ME3 LINE L1 4862 5413 -745 1187 221 28 0 chr2 152592323 152592576 -100664007 + L1ME3 LINE L1 5484 5743 -421 1208 133 63 3 chr2 152592578 152592858 -100663725 - THE1C LTR MaLR -4 371 1 575 108 0 11 chr2 152592858 152592951 -100663632 - THE1C-int LTR MaLR 0 1580 1489 4449 52 17 43 chr2 152592951 152594016 -100662567 - MER11A LTR ERVK 0 1266 1 2980 134 90 6 chr2 152594016 152594494 -100662089 - THE1C-int LTR MaLR -86 1494 977 467 127 13 13 chr2 152594494 152594573 -100662010 - THE1C LTR MaLR -296 79 1 781 248 107 67 chr2 152594573 152594976 -100661607 + L1ME3 LINE L1 5737 6155 -7 234 150 0 0 chr2 152594987 152595027 -100661556 + (GGA)n Simple_repeat Simple_repeat 3 42 0 286 276 10 31 chr2 152595056 152595154 -100661429 + MER5A DNA MER1_type 88 183 -6 471 357 13 22 chr2 152596194 152596421 -100660162 - MIR SINE MIR -9 253 29 569 307 202 31 chr2 152596445 152597162 -100659421 - L2 LINE L2 -7 3306 2457 224 347 27 40 chr2 152597418 152597568 -100659015 + MIR SINE MIR 49 196 -66 1788 127 147 37 chr2 152598130 152598485 -100658098 - MSTA LTR MaLR -34 394 1 1969 113 9 27 chr2 152598485 152598813 -100657770 - MSTA-int LTR MaLR 0 1580 1259 387 0 0 0 chr2 152599394 152599437 -100657146 + (CA)n Simple_repeat Simple_repeat 2 44 0 292 222 162 20 chr2 152599784 152599883 -100656700 + MLT1J2 LTR MaLR 315 427 -23 2240 102 0 3 chr2 152605359 152605653 -100650930 + AluSq SINE Alu 1 293 -20 294 73 0 0 chr2 152605653 152605694 -100650889 + (GGAA)n Simple_repeat Simple_repeat 1 41 0 1201 38 11 33 chr2 152605694 152605877 -100650706 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 1717 138 89 21 chr2 152606331 152606658 -100649925 - THE1C LTR MaLR 0 375 27 2055 127 0 7 chr2 152607091 152607390 -100649193 - AluSx SINE Alu -15 297 1 21 0 0 0 chr2 152607752 152607773 -100648810 + AT_rich Low_complexity Low_complexity 1 21 0 201 279 0 15 chr2 152607858 152607926 -100648657 + (TA)n Simple_repeat Simple_repeat 2 68 0 696 282 45 10 chr2 152607951 152608153 -100648430 + MIR SINE MIR 54 262 0 400 316 128 43 chr2 152608222 152608517 -100648066 - L2 LINE L2 -237 3035 2715 778 281 76 0 chr2 152609040 152609264 -100647319 - MIR SINE MIR -10 252 12 1917 123 18 0 chr2 152609811 152610095 -100646488 + AluSx SINE Alu 3 291 -21 189 0 0 0 chr2 152610733 152610754 -100645829 + (A)n Simple_repeat Simple_repeat 1 21 0 5556 170 30 11 chr2 152612561 152613685 -100642898 + L1MC1 LINE L1 5186 6324 -9 2163 88 0 4 chr2 152614809 152615082 -100641501 + AluSc SINE Alu 3 274 -35 212 0 36 0 chr2 152615087 152615115 -100641468 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 189 74 0 0 chr2 152615332 152615359 -100641224 + (GA)n Simple_repeat Simple_repeat 2 28 0 250 313 102 14 chr2 152616383 152616530 -100640053 + MIR SINE MIR 99 258 -4 184 313 0 0 chr2 152617902 152617950 -100638633 - MIR SINE MIR -122 140 93 956 176 64 0 chr2 152619073 152619284 -100637299 - MER39 LTR ERV1 -442 265 1 471 316 92 0 chr2 152619284 152619458 -100637125 - LTR16A LTR ERVL -56 394 205 401 226 61 17 chr2 152619503 152619618 -100636965 - MLT1B LTR MaLR 0 390 271 344 333 27 7 chr2 152620468 152620618 -100635965 + MIR3 SINE MIR 34 186 -22 568 264 109 14 chr2 152620639 152620859 -100635724 + MIR SINE MIR 22 262 0 1511 168 0 58 chr2 152621014 152621305 -100635278 - AluJo SINE Alu -5 307 34 211 355 148 26 chr2 152622748 152622903 -100633680 - MIR3 SINE MIR -5 203 30 4704 162 20 4 chr2 152623827 152624640 -100631943 + LTR1B LTR ERV1 1 826 0 268 275 9 46 chr2 152625099 152625208 -100631375 + Charlie7 DNA MER1_type 1 105 -2507 333 0 0 0 chr2 152625241 152625278 -100631305 + (TA)n Simple_repeat Simple_repeat 2 38 0 282 182 34 23 chr2 152625286 152625374 -100631209 + Charlie7 DNA MER1_type 2507 2595 -17 398 186 12 0 chr2 152625836 152625922 -100630661 + (TA)n Simple_repeat Simple_repeat 1 87 0 945 141 43 22 chr2 152625941 152626125 -100630458 + L1MA9 LINE L1 6055 6242 -70 413 291 168 10 chr2 152626712 152626908 -100629675 - MIR SINE MIR -16 246 20 268 136 23 0 chr2 152627181 152627225 -100629358 + LTR67 LTR ERVL 507 551 -6 463 254 59 0 chr2 152627997 152628115 -100628468 - MIR SINE MIR -71 191 67 3391 141 60 17 chr2 152628753 152629348 -100627235 - LTR26E LTR ERV1 0 622 2 25 51 0 0 chr2 152629848 152629887 -100626696 + AT_rich Low_complexity Low_complexity 1 39 0 21 71 0 0 chr2 152629916 152629958 -100626625 + AT_rich Low_complexity Low_complexity 1 42 0 256 317 0 58 chr2 152632709 152632813 -100623770 - L2 LINE L2 -186 3086 2989 2399 129 8 21 chr2 152633436 152633816 -100622767 + THE1C LTR MaLR 1 375 0 9077 124 40 37 chr2 152633816 152635392 -100621191 + THE1C-int LTR MaLR 1 1580 0 2674 93 5 11 chr2 152635394 152635769 -100620814 + THE1C LTR MaLR 3 375 0 613 191 9 0 chr2 152635789 152635904 -100620679 + FLAM_C SINE Alu 3 118 -25 29 47 0 0 chr2 152636950 152636993 -100619590 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr2 152637443 152637464 -100619119 + AT_rich Low_complexity Low_complexity 1 21 0 315 49 0 0 chr2 152638613 152638654 -100617929 + (TG)n Simple_repeat Simple_repeat 2 42 0 32 0 0 0 chr2 152638785 152638817 -100617766 + AT_rich Low_complexity Low_complexity 1 32 0 1283 175 0 18 chr2 152638817 152639034 -100617549 - AluJo SINE Alu -15 297 85 8158 172 19 32 chr2 152642047 152642409 -100614174 - L1PB4 LINE L1 0 6156 5791 588 29 0 0 chr2 152642409 152642479 -100614104 + (TAGA)n Simple_repeat Simple_repeat 2 71 0 8158 172 19 32 chr2 152642479 152642650 -100613933 - L1PB4 LINE L1 -365 5791 5619 2105 121 47 0 chr2 152642650 152642948 -100613635 - AluSq SINE Alu -1 312 1 8158 172 19 32 chr2 152642948 152645032 -100611551 - L1PB4 LINE L1 -537 5619 3569 5609 146 24 5 chr2 152647835 152649354 -100607229 + L1MA4 LINE L1 4752 6298 -2 2301 174 7 24 chr2 152649429 152649888 -100606695 - Tigger2 DNA MER2_type -1 2717 2267 439 134 0 0 chr2 152649874 152649941 -100606642 - Tigger2 DNA MER2_type -2651 67 1 * 1983 145 0 13 chr2 152649967 152650270 -100606313 + AluSx SINE Alu 1 299 -13 211 309 111 63 chr2 152650607 152650733 -100605850 - L2 LINE L2 0 3272 3141 1872 148 25 0 chr2 152650770 152651048 -100605535 - AluJb SINE Alu -27 285 1 184 357 80 36 chr2 152651304 152651416 -100605167 - L2 LINE L2 -17 3255 3139 2195 103 3 13 chr2 152651586 152651887 -100604696 + AluSx SINE Alu 3 300 -12 193 239 22 22 chr2 152655015 152655061 -100601522 + MIR SINE MIR 24 69 -139 333 0 0 0 chr2 152655248 152655285 -100601298 + (CA)n Simple_repeat Simple_repeat 1 37 0 301 221 0 0 chr2 152656203 152656271 -100600312 - MER103 DNA DNA -54 112 45 24 0 0 0 chr2 152656905 152656929 -100599654 + AT_rich Low_complexity Low_complexity 1 24 0 1610 152 106 0 chr2 152657433 152657697 -100598886 + AluJo SINE Alu 5 296 -16 338 329 63 63 chr2 152658097 152658523 -100598060 - MLT1K LTR MaLR -19 569 144 414 271 45 15 chr2 152658687 152658820 -100597763 - MLT1K LTR MaLR -358 230 94 283 220 0 33 chr2 152659127 152659218 -100597365 - L1MC4 LINE L1 -1341 6701 6614 2043 214 20 73 chr2 152659229 152659814 -100596769 - MLT2B3 LTR ERVL 0 554 1 969 224 150 66 chr2 152659917 152660444 -100596139 - MLT1E3 LTR MaLR 0 624 1 2236 92 0 13 chr2 152662294 152662597 -100593986 + AluSc SINE Alu 1 299 -10 1377 241 86 26 chr2 152662942 152663361 -100593222 - MLT1H LTR MaLR -105 444 1 24 32 0 0 chr2 152663422 152663453 -100593130 + AT_rich Low_complexity Low_complexity 1 31 0 210 346 51 45 chr2 152664765 152664921 -100591662 + MIR SINE MIR 66 222 -40 356 278 45 21 chr2 152664960 152665072 -100591511 + MIR SINE MIR 4 118 -90 367 279 88 88 chr2 152665124 152665443 -100591140 - L2 LINE L2 -57 3215 2897 263 287 104 26 chr2 152666564 152666679 -100589904 - MIR SINE MIR -81 181 58 714 150 0 0 chr2 152667994 152668127 -100588456 - L1MA4 LINE L1 -1 6299 6167 434 300 98 20 chr2 152668363 152668660 -100587923 + L1ME4a LINE L1 5799 6118 -3 257 179 28 123 chr2 152668759 152668865 -100587718 - MER5A DNA MER1_type -5 184 89 579 214 35 0 chr2 152668865 152669038 -100587545 + CT-rich Low_complexity Low_complexity 2 180 0 189 156 0 0 chr2 152669040 152669072 -100587511 + MER5A DNA MER1_type 136 167 -22 276 335 47 37 chr2 152669587 152669802 -100586781 + L2 LINE L2 2261 2477 -837 202 305 49 12 chr2 152669838 152669920 -100586663 + MIR SINE MIR 168 252 -10 226 244 67 22 chr2 152670792 152670882 -100585701 + MLT1K LTR MaLR 323 416 -172 1073 199 85 4 chr2 152671266 152671537 -100585046 - MER58B DNA MER1_type 0 341 49 2391 164 29 2 chr2 152671667 152672082 -100584501 - MSTB LTR MaLR 0 426 1 2194 198 55 41 chr2 152673353 152673920 -100582663 + MLT1E2 LTR MaLR 52 626 0 1771 191 7 0 chr2 152674023 152674321 -100582262 + AluJo SINE Alu 1 300 -12 1563 172 101 0 chr2 152674323 152674631 -100581952 + MER2 DNA MER2_type 6 344 -1 214 178 0 0 chr2 152674631 152674676 -100581907 - L2 LINE L2 -150 3163 3119 1945 271 88 25 chr2 152674804 152675640 -100580943 - L2 LINE L2 -246 3067 2177 285 328 43 26 chr2 152675689 152675805 -100580778 + MLT1K LTR MaLR 282 399 -189 597 40 0 0 chr2 152675811 152675887 -100580696 + (GA)n Simple_repeat Simple_repeat 2 77 0 21 0 0 0 chr2 152675956 152675977 -100580606 + AT_rich Low_complexity Low_complexity 1 21 0 285 173 0 0 chr2 152675978 152676030 -100580553 + MLT1K LTR MaLR 537 588 0 22 0 0 0 chr2 152676134 152676156 -100580427 + AT_rich Low_complexity Low_complexity 1 22 0 236 256 2 85 chr2 152676292 152676383 -100580200 - MIR SINE MIR -109 99 35 2789 160 52 14 chr2 152676387 152676888 -100579695 - MLT2B1 LTR ERVL 0 520 1 21 82 0 0 chr2 152677429 152677478 -100579105 + AT_rich Low_complexity Low_complexity 1 49 0 262 269 121 10 chr2 152677531 152677654 -100578929 + MIR SINE MIR 16 154 -54 213 235 0 0 chr2 152678311 152678362 -100578221 + A-rich Low_complexity Low_complexity 1 51 0 517 299 79 28 chr2 152679635 152679849 -100576734 - MIR SINE MIR -16 246 22 211 214 0 0 chr2 152681885 152681927 -100574656 + (TATG)n Simple_repeat Simple_repeat 3 44 0 236 237 31 41 chr2 152681979 152682076 -100574507 - L1ME3 LINE L1 0 6162 6067 2048 168 65 32 chr2 152682152 152682564 -100574019 + MSTB LTR MaLR 1 426 0 1433 284 83 0 chr2 152682610 152683113 -100573470 - L1ME3 LINE L1 -295 5867 5323 7778 16 2 0 chr2 152683123 152684022 -100572561 + L1PA3 LINE L1 5254 6154 -1 340 301 29 0 chr2 152684063 152684199 -100572384 - L1ME3 LINE L1 -846 5300 5161 487 250 15 0 chr2 152684219 152684245 -100572338 - L1MA10 LINE L1 -28 6306 6281 8397 245 43 28 chr2 152684245 152688029 -100568554 - L1ME1 LINE L1 -47 6119 2284 252 170 38 38 chr2 152688031 152688084 -100568499 - MER58 DNA MER1_type 0 2420 2368 674 306 99 42 chr2 152689062 152689524 -100567059 - MLT1G3 LTR MaLR -2 540 90 537 135 0 0 chr2 152689764 152689853 -100566730 + (A)n Simple_repeat Simple_repeat 1 89 0 658 262 25 75 chr2 152690529 152690808 -100565775 - MLT1-int LTR MaLR -770 601 337 395 274 0 28 chr2 152690819 152690925 -100565658 - MLT1G LTR MaLR -376 214 112 677 268 134 36 chr2 152691140 152691626 -100564957 - MLT1G3 LTR MaLR -2 593 1 30 27 0 0 chr2 152691686 152691723 -100564860 + AT_rich Low_complexity Low_complexity 1 37 0 182 235 29 103 chr2 152693310 152693378 -100563205 - L2 LINE L2 0 3272 3210 1446 167 8 10 chr2 152693744 152694175 -100562408 - L1P5 LINE L1 -623 5528 5099 1694 152 160 42 chr2 152694175 152694200 -100562383 + MSTA LTR MaLR 2 23 -405 1856 136 52 33 chr2 152694200 152694568 -100562015 - THE1C LTR MaLR 0 375 1 1694 152 160 42 chr2 152694568 152694924 -100561659 + MSTA LTR MaLR 23 428 0 9535 138 7 35 chr2 152694925 152696549 -100560034 + MSTA-int LTR MaLR 3 1580 0 1796 151 164 11 chr2 152696549 152696920 -100559663 + MSTA LTR MaLR 1 428 0 3113 207 14 6 chr2 152696938 152697642 -100558941 - L1 LINE L1 -1059 5087 4378 2220 217 2 6 chr2 152697640 152698142 -100558441 + L1 LINE L1 3904 4403 -1743 * 593 306 103 9 chr2 152699494 152699726 -100556857 + MIR SINE MIR 9 262 0 199 311 0 0 chr2 152699950 152699995 -100556588 - L3b LINE CR1 -248 1335 1291 2024 176 2 23 chr2 152701013 152701411 -100555172 + MLT1B LTR MaLR 1 390 0 927 17 0 17 chr2 152702527 152702644 -100553939 + L1PA4 LINE L1 6041 6155 0 375 21 0 0 chr2 152704590 152704637 -100551946 - MADE1 DNA Mariner 0 80 34 506 98 0 24 chr2 152704693 152704775 -100551808 - MADE1 DNA Mariner 0 80 1 284 286 137 51 chr2 152705366 152705621 -100550962 - L2 LINE L2 -1382 1932 1656 230 283 0 0 chr2 152706331 152706391 -100550192 - MIR SINE MIR 0 262 203 364 315 40 96 chr2 152706443 152706557 -100550026 - L1MC4a LINE L1 -62 6059 5940 2774 10 0 0 chr2 152706557 152706861 -100549722 + AluYa5 SINE Alu 1 304 -7 364 315 40 96 chr2 152706861 152707216 -100549367 - L1MC4a LINE L1 -181 5940 5613 1844 125 15 160 chr2 152707513 152707969 -100548614 - MLT1B LTR MaLR 0 390 1 269 276 82 73 chr2 152708275 152708508 -100548075 - L1M3 LINE L1 -578 5543 5310 329 344 42 48 chr2 152708553 152708884 -100547699 - L1M3 LINE L1 -915 5231 4903 242 321 8 11 chr2 152708912 152709035 -100547548 - L1 LINE L1 -1273 4873 4749 267 233 78 11 chr2 152709225 152709315 -100547268 + L1MCc LINE L1 50 145 -6278 1615 245 125 21 chr2 152709651 152709967 -100546616 + L1MD3 LINE L1 5043 5325 -1019 4949 97 23 7 chr2 152709967 152710711 -100545872 + L1PA13 LINE L1 5406 6161 -2 1615 245 125 21 chr2 152710711 152711386 -100545197 + L1MD3 LINE L1 5325 6138 -206 525 224 52 0 chr2 152711410 152711544 -100545039 - L1MA9 LINE L1 -39 6273 6133 1393 208 12 30 chr2 152711611 152711943 -100544640 - L1MA9 LINE L1 -205 6107 5782 192 212 44 0 chr2 152711949 152712086 -100544497 + (TA)n Simple_repeat Simple_repeat 1 143 0 3877 203 19 15 chr2 152712103 152713416 -100543167 - L1MA9 LINE L1 -519 5793 4483 3410 248 89 78 chr2 152713470 152714129 -100542454 + L1MD3 LINE L1 6217 6867 -1128 1569 99 29 0 chr2 152714129 152714372 -100542211 + L1MA2 LINE L1 6055 6304 0 3410 248 89 78 chr2 152714372 152715451 -100541132 + L1MD3 LINE L1 6867 7974 -21 517 321 38 11 chr2 152715637 152715902 -100540681 - L1M4 LINE L1 -1712 4434 4163 236 266 65 65 chr2 152716356 152716410 -100540173 - HAL1 LINE L1 -917 1590 1537 2532 66 0 22 chr2 152716410 152716728 -100539855 - AluY SINE Alu 0 311 1 236 266 65 65 chr2 152716728 152716857 -100539726 - HAL1 LINE L1 -969 1538 1407 6860 58 10 0 chr2 152716911 152718135 -100538448 - L1PA7 LINE L1 -2 6152 4916 424 329 68 18 chr2 152718151 152718370 -100538213 - L1MEd LINE L1 -4935 1184 955 35 0 0 0 chr2 152718584 152718619 -100537964 + AT_rich Low_complexity Low_complexity 1 35 0 3091 206 189 20 chr2 152720023 152721024 -100535559 + MER52A LTR ERV1 1 1232 -523 38016 37 2 5 chr2 152721026 152727220 -100529363 + L1PA4 LINE L1 3 6171 0 1668 188 8 66 chr2 152727220 152727598 -100528985 + MER52A LTR ERV1 1221 1576 -179 621 316 43 56 chr2 152728163 152728555 -100528028 - MLT1J LTR MaLR -23 488 102 7219 169 47 19 chr2 152729470 152731912 -100524671 - L1MA4 LINE L1 -6 7356 4856 1425 195 18 4 chr2 152731921 152732198 -100524385 + Ricksha DNA DNA 9 289 -2957 * 7081 179 38 12 chr2 152732196 152733579 -100523004 + Ricksha DNA DNA 1821 3240 -6 5177 214 22 19 chr2 152733579 152734870 -100521713 - L1MA4 LINE L1 -2339 4869 3574 1886 299 84 33 chr2 152734891 152735897 -100520686 - L1MA4 LINE L1 -5656 1553 138 491 267 7 14 chr2 152735997 152736143 -100520440 - L1M2 LINE L1 -6694 155 11 294 234 69 41 chr2 152736745 152736890 -100519693 + L1MC/D LINE L1 5649 5797 -2011 2103 186 3 3 chr2 152737709 152738075 -100518508 + MER47A DNA MER2_type 1 366 0 2416 270 55 54 chr2 152738699 152739449 -100517134 + L2 LINE L2 1806 2559 -755 2374 81 7 13 chr2 152739449 152739758 -100516825 - AluY SINE Alu -4 307 1 2416 270 55 54 chr2 152739758 152739922 -100516661 + L2 LINE L2 2559 2721 -593 183 322 103 0 chr2 152739978 152740065 -100516518 + MIR SINE MIR 150 245 -17 1804 197 31 3 chr2 152740163 152740190 -100516393 + MLT1A1 LTR MaLR 1 26 -339 261 0 0 0 chr2 152740190 152740219 -100516364 + (TA)n Simple_repeat Simple_repeat 1 29 0 1804 197 31 3 chr2 152740219 152740546 -100516037 + MLT1A1 LTR MaLR 26 365 0 295 187 173 0 chr2 152741244 152741319 -100515264 - MIR SINE MIR 0 262 175 55 0 0 0 chr2 152741328 152741383 -100515200 + AT_rich Low_complexity Low_complexity 1 55 0 306 264 7 161 chr2 152741417 152741572 -100515011 - MIR SINE MIR -128 134 4 575 297 87 22 chr2 152742225 152742454 -100514129 - MIR SINE MIR -13 249 6 371 367 57 6 chr2 152743592 152743750 -100512833 - L2 LINE L2 0 3272 3107 33 0 0 0 chr2 152744976 152745009 -100511574 + AT_rich Low_complexity Low_complexity 1 33 0 208 301 55 14 chr2 152745526 152745599 -100510984 + MIR3 SINE MIR 130 205 -3 213 361 68 75 chr2 152745905 152746038 -100510545 + MIR SINE MIR 18 149 -113 240 35 0 0 chr2 152746126 152746155 -100510428 + (ATG)n Simple_repeat Simple_repeat 2 30 0 310 236 39 4 chr2 152747004 152747244 -100509339 + (TA)n Simple_repeat Simple_repeat 1 248 0 2997 209 102 0 chr2 152748254 152748981 -100507602 - L1MB7 LINE L1 0 6682 5882 1625 264 49 43 chr2 152748983 152750051 -100506532 - L1MB7 LINE L1 -3553 3091 1927 2182 112 0 16 chr2 152750051 152750354 -100506229 - AluY SINE Alu -8 303 6 1625 264 49 43 chr2 152750354 152750694 -100505889 - L1MB7 LINE L1 -4717 1927 1590 * 3767 238 32 56 chr2 152750688 152751042 -100505541 - L1MB7 LINE L1 -5153 1389 1028 1432 199 81 12 chr2 152751042 152751363 -100505220 - MER61A LTR ERV1 0 343 1 3767 238 32 56 chr2 152751363 152752242 -100504341 - L1MB7 LINE L1 -5514 1028 186 403 260 10 104 chr2 152752256 152752448 -100504135 + L1MB2 LINE L1 421 594 -5709 30217 120 19 44 chr2 152752450 152758760 -100497823 + L1PA7 LINE L1 9 6151 -3 373 267 50 62 chr2 152758843 152759004 -100497579 + L1MB2 LINE L1 648 806 -5497 11166 225 44 27 chr2 152759161 152764767 -100491816 + L1MB2 LINE L1 777 6400 -7 740 254 11 0 chr2 152764789 152764974 -100491609 - L1M4 LINE L1 -6347 195 9 361 349 20 20 chr2 152766796 152766942 -100489641 + MLT1K LTR MaLR 73 218 -370 734 266 30 15 chr2 152766959 152767158 -100489425 - MIR SINE MIR -46 216 15 491 280 87 19 chr2 152767204 152767411 -100489172 + MLT1K LTR MaLR 313 533 -55 180 143 0 0 chr2 152767723 152767765 -100488818 + (A)n Simple_repeat Simple_repeat 1 42 0 21 0 0 0 chr2 152769622 152769643 -100486940 + AT_rich Low_complexity Low_complexity 1 21 0 515 260 227 33 chr2 152770223 152770523 -100486060 - L2 LINE L2 -4 3309 2952 1100 274 94 21 chr2 152770528 152770901 -100485682 + LTR40a LTR ERVL 2 401 -118 1690 287 85 30 chr2 152770918 152771646 -100484937 - L2 LINE L2 -1294 2020 1253 413 268 45 13 chr2 152771746 152771903 -100484680 + MER103 DNA DNA 3 164 -2 22 0 0 0 chr2 152772572 152772594 -100483989 + AT_rich Low_complexity Low_complexity 1 22 0 210 71 0 0 chr2 152772687 152772715 -100483868 + (CA)n Simple_repeat Simple_repeat 2 29 0 245 229 49 25 chr2 152773598 152773720 -100482863 + (TA)n Simple_repeat Simple_repeat 1 125 0 212 254 0 17 chr2 152773758 152773817 -100482766 + (TAAAG)n Simple_repeat Simple_repeat 5 62 0 291 330 9 9 chr2 152774067 152774182 -100482401 + MER102a DNA MER1_type 215 329 -1 229 224 52 0 chr2 152775368 152775426 -100481157 + MIR SINE MIR 79 139 -123 2032 128 60 28 chr2 152775427 152775780 -100480803 - THE1B LTR MaLR 0 364 1 11483 100 8 7 chr2 152775780 152777358 -100479225 - THE1B-int LTR MaLR 0 1580 1 2049 145 58 3 chr2 152777358 152777703 -100478880 - THE1B LTR MaLR 0 364 1 384 336 103 54 chr2 152777921 152778349 -100478234 - L2 LINE L2 0 3272 2824 186 289 58 0 chr2 152778528 152778580 -100478003 - MIR3 SINE MIR -43 165 111 461 95 0 27 chr2 152778864 152778938 -100477645 + MADE1 DNA Mariner 3 74 -6 212 338 14 0 chr2 152778980 152779054 -100477529 + L2 LINE L2 3193 3267 -5 789 234 29 0 chr2 152779103 152779278 -100477305 + MER5A DNA MER1_type 10 189 0 22 0 0 0 chr2 152779540 152779562 -100477021 + AT_rich Low_complexity Low_complexity 1 22 0 249 206 50 131 chr2 152779645 152779805 -100476778 - L1ME4a LINE L1 -94 6027 5881 231 264 94 25 chr2 152779961 152780120 -100476463 - L1ME4a LINE L1 -339 5782 5613 1473 203 119 55 chr2 152781027 152781073 -100475510 - MLT2B1 LTR ERVL 0 520 478 339 44 0 0 chr2 152781073 152781118 -100475465 + (TG)n Simple_repeat Simple_repeat 2 46 0 1473 203 119 55 chr2 152781118 152781560 -100475023 - MLT2B1 LTR ERVL -42 478 1 453 235 57 38 chr2 152781932 152782299 -100474284 - L1P5 LINE L1 -676 5478 5101 1527 155 161 42 chr2 152782302 152782325 -100474258 + MSTA LTR MaLR 4 23 -405 1855 139 52 33 chr2 152782325 152782693 -100473890 - THE1C LTR MaLR 0 375 1 1527 155 161 42 chr2 152782693 152783049 -100473534 + MSTA LTR MaLR 23 428 0 3154 142 14 11 chr2 152783049 152783642 -100472941 + MSTA-int LTR MaLR 2 554 -1026 536 306 48 4 chr2 152783799 152784051 -100472532 + MLT2B1 LTR ERVL 249 511 -9 185 206 41 151 chr2 152784064 152784137 -100472446 + MIR SINE MIR 35 99 -109 22 0 0 0 chr2 152784293 152784315 -100472268 + AT_rich Low_complexity Low_complexity 1 22 0 256 192 0 0 chr2 152784419 152784471 -100472112 - MLT1K LTR MaLR 0 588 537 21 0 0 0 chr2 152784472 152784493 -100472090 + AT_rich Low_complexity Low_complexity 1 21 0 540 56 0 0 chr2 152784564 152784636 -100471947 + (TC)n Simple_repeat Simple_repeat 2 73 0 274 308 0 33 chr2 152784642 152784733 -100471850 - MLT1K LTR MaLR -189 399 312 1132 116 21 5 chr2 152784979 152785169 -100471414 + AluSg/x SINE Alu 110 302 -10 21 0 0 0 chr2 152785935 152785956 -100470627 + AT_rich Low_complexity Low_complexity 1 21 0 348 182 306 12 chr2 152785956 152786126 -100470457 + Charlie1 DNA MER1_type 2 2459 -302 1753 142 18 4 chr2 152786274 152786555 -100470028 + AluSx SINE Alu 11 295 -17 838 242 101 3 chr2 152788979 152789297 -100467286 - MER69 DNA AcHobo -13 2513 2165 1327 272 125 13 chr2 152789298 152789762 -100466821 - MER69 DNA AcHobo -2010 516 1 703 309 28 14 chr2 152789766 152790054 -100466529 - L2 LINE L2 -1220 2094 1803 286 179 39 115 chr2 152790237 152790315 -100466268 + L2 LINE L2 3201 3272 0 257 217 0 0 chr2 152790446 152790506 -100466077 + GA-rich Low_complexity Low_complexity 2 61 0 187 320 100 53 chr2 152790709 152790859 -100465724 - L2 LINE L2 -226 3046 2890 209 305 21 32 chr2 152791573 152791668 -100464915 - MIR SINE MIR -26 236 143 1660 222 82 9 chr2 152791668 152792092 -100464491 + MLT1C LTR MaLR 1 455 -12 201 291 174 12 chr2 152792112 152792198 -100464385 - MIR SINE MIR -71 137 38 3925 92 20 0 chr2 152792672 152793215 -100463368 - MER41A LTR ERV1 0 554 1 8831 89 26 10 chr2 152793221 152794548 -100462035 - MER41A-int LTR ERV1 -8 5938 4590 3004 131 34 25 chr2 152794545 152795158 -100461425 - MER41A-int LTR ERV1 -1542 3473 2855 * 4903 129 47 35 chr2 152795144 152795758 -100460825 - MER41A-int LTR ERV1 -4057 3759 3154 2357 82 0 16 chr2 152795758 152796074 -100460509 + AluY SINE Alu 1 311 0 4903 129 47 35 chr2 152796074 152797021 -100459562 - MER41A-int LTR ERV1 -4662 3154 1 294 117 338 13 chr2 152797030 152797107 -100459476 - MER41A-int LTR ERV1 -5844 102 1 3998 100 5 0 chr2 152797107 152797658 -100458925 - MER41A LTR ERV1 0 554 1 2390 199 32 60 chr2 152797716 152798344 -100458239 + LTR9 LTR ERV1 3 612 0 2093 159 88 20 chr2 152799215 152799612 -100456971 + MSTC LTR MaLR 1 424 -4 362 214 14 0 chr2 152800183 152800253 -100456330 + MER21B LTR ERV1 12 82 -781 2865 233 50 25 chr2 152800270 152801038 -100455545 + MER21B LTR ERV1 19 805 -58 2441 103 0 0 chr2 152801145 152801456 -100455127 - AluSx SINE Alu -1 311 1 1053 192 175 3 chr2 152801843 152802134 -100454449 - MER58B DNA MER1_type 0 341 1 40 21 0 0 chr2 152802633 152802680 -100453903 + AT_rich Low_complexity Low_complexity 1 47 0 25 90 0 0 chr2 152803096 152803163 -100453420 + AT_rich Low_complexity Low_complexity 1 67 0 267 105 0 0 chr2 152803163 152803201 -100453382 + MLT2B1 LTR ERVL 483 520 0 183 80 0 0 chr2 152803301 152803326 -100453257 + (CACCAT)n Simple_repeat Simple_repeat 6 30 0 444 314 57 19 chr2 152803483 152803693 -100452890 - LTR33 LTR ERVL 0 521 304 3243 152 35 70 chr2 152803706 152804422 -100452161 - LTR8 LTR ERV1 0 691 1 774 247 63 33 chr2 152804818 152805089 -100451494 + LTR33 LTR ERVL 2 280 -241 2995 179 18 69 chr2 152805093 152805821 -100450762 + LTR8 LTR ERV1 1 691 0 610 241 82 16 chr2 152806836 152807081 -100449502 - ORSL DNA AcHobo 0 275 15 245 222 0 25 chr2 152809046 152809127 -100447456 + (TTAAA)n Simple_repeat Simple_repeat 3 81 0 1995 49 0 0 chr2 152809227 152809496 -100447087 + L1PA5 LINE L1 5893 6161 0 23 33 0 0 chr2 152809552 152809582 -100447001 + AT_rich Low_complexity Low_complexity 1 30 0 29 47 0 0 chr2 152810493 152810536 -100446047 + AT_rich Low_complexity Low_complexity 1 43 0 183 241 0 74 chr2 152810726 152810780 -100445803 + MIR SINE MIR 97 146 -116 357 109 0 0 chr2 152811910 152811965 -100444618 + (CA)n Simple_repeat Simple_repeat 2 56 0 2505 244 98 2 chr2 152812320 152813151 -100443432 - L1ME2 LINE L1 -1 6958 6049 * 4331 272 80 48 chr2 152813150 152817304 -100439279 - L1ME2 LINE L1 -1269 5672 1162 306 87 0 0 chr2 152817561 152817607 -100438976 + Alu SINE Alu 254 299 -3 767 278 11 0 chr2 152817630 152817817 -100438766 - MER5A DNA MER1_type 0 189 1 566 317 63 65 chr2 152817870 152818600 -100437983 - L2 LINE L2 -65 3248 2524 184 273 0 0 chr2 152818611 152818655 -100437928 + MER5A DNA MER1_type 68 111 -78 213 233 0 0 chr2 152818663 152818706 -100437877 - MER5B DNA MER1_type -135 43 1 184 363 90 14 chr2 152818706 152818889 -100437694 - L2 LINE L2 -516 2798 2600 888 187 43 5 chr2 152818904 152819091 -100437492 - MER3 DNA MER1_type -11 198 5 22 0 0 0 chr2 152819971 152819993 -100436590 + AT_rich Low_complexity Low_complexity 1 22 0 482 260 130 24 chr2 152820746 152820979 -100435604 + MIR SINE MIR 3 258 -4 2507 64 0 0 chr2 152821186 152821484 -100435099 - AluY SINE Alu -13 298 1 643 258 151 28 chr2 152822342 152822840 -100433743 + MLT1H1 LTR MaLR 11 555 0 1868 61 20 4 chr2 152823161 152823407 -100433176 - L1PA5 LINE L1 0 6154 5905 2085 49 84 0 chr2 152823407 152823692 -100432891 + L1PA5 LINE L1 5586 5894 -260 202 338 64 25 chr2 152824237 152824394 -100432189 - L2 LINE L2 0 3313 3151 206 301 147 22 chr2 152824460 152824596 -100431987 - MIR SINE MIR -6 256 104 187 337 32 21 chr2 152824770 152824865 -100431718 - MIR SINE MIR -70 192 97 189 343 36 64 chr2 152825902 152826042 -100430541 + MIR SINE MIR 29 164 -98 331 315 210 0 chr2 152826099 152826280 -100430303 - MIR SINE MIR -22 240 22 539 338 25 0 chr2 152827175 152827335 -100429248 - MIR SINE MIR -67 195 32 251 299 0 13 chr2 152827475 152827552 -100429031 + GA-rich Low_complexity Low_complexity 1 76 0 430 289 44 9 chr2 152828170 152828284 -100428299 + MER5B DNA MER1_type 1 118 -60 312 236 14 28 chr2 152828716 152828788 -100427795 - Charlie8 DNA MER1_type -1003 1414 1344 1898 112 11 11 chr2 152830922 152831199 -100425384 + AluSc SINE Alu 1 277 -32 314 293 21 37 chr2 152831272 152831463 -100425120 + MER5A DNA MER1_type 1 188 -1 186 309 24 60 chr2 152831539 152831623 -100424960 + MIR SINE MIR 139 219 -43 224 170 19 0 chr2 152834022 152834075 -100422508 + (TAGA)n Simple_repeat Simple_repeat 4 57 0 22 0 0 0 chr2 152834659 152834681 -100421902 + AT_rich Low_complexity Low_complexity 1 22 0 181 296 56 0 chr2 152835564 152835635 -100420948 + MIR SINE MIR 172 246 -16 360 210 0 25 chr2 152836628 152836709 -100419874 - MER103 DNA DNA -42 124 46 2008 107 4 11 chr2 152836939 152837220 -100419363 + AluSc SINE Alu 1 279 -30 2226 157 56 47 chr2 152837358 152837786 -100418797 + MSTB1 LTR MaLR 1 432 0 754 210 7 14 chr2 152838002 152838140 -100418443 + MER5A DNA MER1_type 47 183 -6 289 306 41 0 chr2 152838151 152838249 -100418334 + MIR SINE MIR 36 137 -125 399 160 43 0 chr2 152838374 152838468 -100418115 - L1MB4 LINE L1 0 6180 6083 236 186 0 0 chr2 152838497 152838540 -100418043 + L1MA4 LINE L1 5934 5976 -324 * 11825 200 29 32 chr2 152838532 152843965 -100412618 - L1M1 LINE L1 -778 5560 211 2149 134 11 53 chr2 152843965 152844345 -100412238 - THE1B LTR MaLR 0 364 1 11508 91 16 5 chr2 152844348 152845905 -100410678 - THE1B-int LTR MaLR -5 1575 1 2027 157 3 50 chr2 152845905 152846287 -100410296 - THE1B LTR MaLR 0 364 1 991 221 28 24 chr2 152846287 152846500 -100410083 - L1M1 LINE L1 -5113 215 2 479 250 149 16 chr2 152848879 152849067 -100407516 - MIR SINE MIR 0 262 50 21 71 0 0 chr2 152849118 152849160 -100407423 + AT_rich Low_complexity Low_complexity 1 42 0 180 250 19 39 chr2 152849729 152849781 -100406802 - L2 LINE L2 -834 2480 2430 1494 268 52 12 chr2 152850008 152850411 -100406172 - MLT1F1 LTR MaLR -102 465 47 558 220 0 0 chr2 152850451 152850551 -100406032 + Tigger7 DNA MER2_type 2387 2486 -1 301 219 62 31 chr2 152850922 152851018 -100405565 + L2 LINE L2 3209 3307 -6 472 263 40 23 chr2 152852098 152852273 -100404310 - LTR33 LTR ERVL -10 511 334 419 358 57 0 chr2 152852368 152852561 -100404022 - LTR33 LTR ERVL -313 208 5 1556 166 129 69 chr2 152852760 152853164 -100403419 - MSTA LTR MaLR 0 428 1 674 324 53 7 chr2 152853184 152853465 -100403118 - HERVL LTR ERVL -313 5341 5048 732 294 84 15 chr2 152853525 152853868 -100402715 - HERVL LTR ERVL -1211 4553 4187 367 236 279 0 chr2 152854247 152854387 -100402196 + MER5A DNA MER1_type 11 189 0 708 199 149 0 chr2 152854507 152854648 -100401935 - MER5A DNA MER1_type 0 189 28 538 311 79 41 chr2 152854649 152854964 -100401619 + LTR67 LTR ERVL 219 545 -12 1831 138 6 44 chr2 152855295 152855614 -100400969 + AluSx SINE Alu 1 307 -5 23 0 0 0 chr2 152855618 152855641 -100400942 + AT_rich Low_complexity Low_complexity 1 23 0 1556 160 14 14 chr2 152856038 152856332 -100400251 - AluSx SINE Alu -18 294 1 559 219 178 49 chr2 152856556 152856908 -100399675 - MER110A LTR ERV1 0 468 70 189 261 0 22 chr2 152857024 152857070 -100399513 + L2 LINE L2 3215 3259 -13 444 123 0 0 chr2 152857082 152857155 -100399428 + (TGGA)n Simple_repeat Simple_repeat 1 73 0 1247 140 0 14 chr2 152857663 152857870 -100398713 + L1PA8 LINE L1 3535 3738 -2408 755 42 0 0 chr2 152857870 152857966 -100398617 + L1PA2 LINE L1 6060 6155 0 * 11177 98 6 1 chr2 152857965 152860399 -100396184 + L1PA8 LINE L1 3729 6167 -5 285 356 10 10 chr2 152861590 152861694 -100394889 - L2 LINE L2 0 3272 3169 206 319 0 14 chr2 152862146 152862215 -100394368 - L2 LINE L2 -4 3309 3242 23 0 0 0 chr2 152862260 152862283 -100394300 + AT_rich Low_complexity Low_complexity 1 23 0 367 262 78 0 chr2 152863822 152863925 -100392658 - MLT1J2 LTR MaLR -336 114 4 3086 234 46 3 chr2 152864112 152864851 -100391732 - MER20B DNA MER1_type -11 772 2 1464 309 144 43 chr2 152864853 152865986 -100390597 - L2 LINE L2 -417 2897 1651 1089 314 45 6 chr2 152866219 152866553 -100390030 + LTR16C LTR ERVL 144 490 -1 398 278 143 62 chr2 152866749 152867134 -100389449 - MLT1K LTR MaLR -2 586 171 700 366 68 18 chr2 152867251 152867800 -100388783 + L2 LINE L2 2475 3055 -217 1488 256 89 47 chr2 152869173 152869323 -100387260 + L1MC4 LINE L1 6460 6602 -1440 2109 125 7 0 chr2 152869323 152869612 -100386971 - AluSc SINE Alu -16 293 3 1488 256 89 47 chr2 152869612 152870079 -100386504 + L1MC4 LINE L1 6602 7103 -939 2544 228 41 3 chr2 152870094 152870727 -100385856 + L1MC4 LINE L1 7242 7898 -144 190 320 165 0 chr2 152871182 152871285 -100385298 - L2 LINE L2 -15 3298 3179 364 366 53 18 chr2 152874906 152875133 -100381450 - MIR SINE MIR -6 256 22 189 0 0 0 chr2 152876002 152876023 -100380560 + (T)n Simple_repeat Simple_repeat 1 21 0 2134 51 4 0 chr2 152877543 152877797 -100378786 - AluY SINE Alu -12 299 45 194 133 0 22 chr2 152878107 152878152 -100378431 + (TA)n Simple_repeat Simple_repeat 2 45 0 261 409 0 15 chr2 152878155 152878287 -100378296 - MIR SINE MIR -124 138 9 1016 185 60 28 chr2 152878404 152878620 -100377963 - MER58A DNA MER1_type -1 223 1 247 336 145 15 chr2 152879485 152879616 -100376967 + MIR SINE MIR 31 178 -84 458 252 65 19 chr2 152880981 152881136 -100375447 + MIR SINE MIR 101 262 0 261 0 0 0 chr2 152881979 152882008 -100374575 + (CA)n Simple_repeat Simple_repeat 2 30 0 530 116 53 11 chr2 152882083 152882178 -100374405 - MER63 DNA MER1_type -85 751 27 23 33 0 0 chr2 152882985 152883015 -100373568 + AT_rich Low_complexity Low_complexity 1 30 0 28 48 0 0 chr2 152883397 152883439 -100373144 + AT_rich Low_complexity Low_complexity 1 42 0 294 95 0 0 chr2 152883466 152883508 -100373075 + (TG)n Simple_repeat Simple_repeat 2 43 0 1741 198 123 5 chr2 152883512 152883941 -100372642 - MLT2B1 LTR ERVL -40 480 1 311 104 0 0 chr2 152884061 152884109 -100372474 + MLT2B1 LTR ERVL 473 520 0 480 313 101 49 chr2 152884347 152885042 -100371541 - L1 LINE L1 -757 5389 4627 4144 71 4 0 chr2 152885276 152885809 -100370774 - L1PA7 LINE L1 -4 6150 5616 24 77 0 0 chr2 152886212 152886264 -100370319 + AT_rich Low_complexity Low_complexity 1 52 0 225 343 0 0 chr2 152886565 152886638 -100369945 - MIR3 SINE MIR -25 183 111 429 173 59 0 chr2 152887016 152887114 -100369469 - L1MA9 LINE L1 -161 6130 6028 534 175 109 22 chr2 152887114 152887251 -100369332 + L1MA9 LINE L1 6132 6280 -32 1217 276 38 10 chr2 152887438 152887836 -100368747 - L1PA12 LINE L1 -6103 1478 1070 4709 67 106 2 chr2 152887836 152888459 -100368124 + LTR12 LTR ERV1 1 688 0 29724 96 5 7 chr2 152888483 152893552 -100363031 + HERV9 LTR ERV1 58 5197 -3202 11526 80 18 10 chr2 152893550 152895207 -100361376 + HERV9 LTR ERV1 6699 8369 -30 * 1604 277 96 43 chr2 152895207 152895237 -100361346 - L1PA12 LINE L1 -6753 828 801 4585 69 108 11 chr2 152895237 152895864 -100360719 + LTR12 LTR ERV1 1 688 0 1604 277 96 43 chr2 152895864 152896614 -100359969 - L1PA12 LINE L1 -6780 801 7 1828 142 139 16 chr2 152896712 152897092 -100359491 + MSTA LTR MaLR 2 428 0 9824 133 8 36 chr2 152897094 152898717 -100357866 + MSTA-int LTR MaLR 3 1580 0 1263 134 214 27 chr2 152898717 152899035 -100357548 + MSTA LTR MaLR 1 390 -38 218 138 43 75 chr2 152899516 152899610 -100356973 + (TTATA)n Simple_repeat Simple_repeat 1 91 0 3501 201 15 73 chr2 152899767 152900498 -100356085 + L1MA9 LINE L1 4879 5651 -661 632 125 0 10 chr2 152900498 152900602 -100355981 + U13 snRNA snRNA 1 103 -1 3501 201 15 73 chr2 152900602 152900819 -100355764 + L1MA9 LINE L1 5651 5879 -433 15684 139 27 8 chr2 152900819 152903485 -100353098 + Tigger2 DNA MER2_type 2 2717 -1 3501 201 15 73 chr2 152903485 152904016 -100352567 + L1MA9 LINE L1 5879 6274 -38 35 0 0 0 chr2 152904016 152904051 -100352532 + AT_rich Low_complexity Low_complexity 1 35 0 313 259 37 0 chr2 152904596 152904677 -100351906 + LTR33A LTR ERVL 440 523 0 565 308 95 71 chr2 152904677 152905634 -100350949 - L1M4 LINE L1 -2142 4004 3025 871 244 20 24 chr2 152905805 152906051 -100350532 + MIR SINE MIR 18 262 0 234 130 10 70 chr2 152907464 152907564 -100349019 + (GGGGA)n Simple_repeat Simple_repeat 4 97 0 216 0 0 0 chr2 152908156 152908180 -100348403 + (T)n Simple_repeat Simple_repeat 1 24 0 233 351 0 14 chr2 152908420 152908494 -100348089 - MIR SINE MIR -170 92 20 410 319 83 48 chr2 152908850 152909079 -100347504 - MIR SINE MIR -6 256 20 221 130 43 0 chr2 152909947 152909993 -100346590 + (TA)n Simple_repeat Simple_repeat 1 48 0 244 321 57 98 chr2 152910164 152910429 -100346154 + L2 LINE L2 3004 3257 -15 226 319 29 0 chr2 152910471 152910540 -100346043 + L2 LINE L2 3149 3219 -53 258 277 10 40 chr2 152910644 152910745 -100345838 + MLT1F1 LTR MaLR 1 98 -469 3032 42 0 16 chr2 152910762 152911139 -100345444 + L1PA5 LINE L1 5780 6150 -4 210 37 0 0 chr2 152911140 152911167 -100345416 + (TA)n Simple_repeat Simple_repeat 2 28 0 889 241 146 15 chr2 152911426 152911687 -100344896 + MLT1G1 LTR MaLR 301 595 0 186 132 57 0 chr2 152911718 152911771 -100344812 + (TA)n Simple_repeat Simple_repeat 1 56 0 270 306 25 59 chr2 152911771 152911917 -100344666 - MIR SINE MIR -58 204 65 198 0 0 0 chr2 152911917 152911939 -100344644 + (CA)n Simple_repeat Simple_repeat 2 23 0 270 306 25 59 chr2 152911939 152911996 -100344587 - MIR SINE MIR -197 65 8 22 35 0 0 chr2 152912295 152912324 -100344259 + AT_rich Low_complexity Low_complexity 1 29 0 623 179 122 39 chr2 152913232 152913388 -100343195 + MLT1J LTR MaLR 1 169 -342 259 176 0 40 chr2 152913396 152913470 -100343113 + (TAGA)n Simple_repeat Simple_repeat 3 73 0 514 200 25 0 chr2 152913473 152913593 -100342990 + L1MC4 LINE L1 7920 8042 0 666 256 109 38 chr2 152913787 152914025 -100342558 + MIR SINE MIR 7 261 -1 294 261 107 85 chr2 152914638 152914902 -100341681 + MLT1L LTR MaLR 27 301 -230 238 264 0 0 chr2 152917544 152917597 -100338986 - MLT1K LTR MaLR -8 580 528 180 0 0 0 chr2 152918207 152918227 -100338356 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1786 108 24 0 chr2 152918240 152918489 -100338094 - AluSq SINE Alu -58 255 1 384 296 83 35 chr2 152918871 152919814 -100336769 - L1MB5 LINE L1 -192 5982 5086 252 0 0 0 chr2 152919814 152919842 -100336741 + (TG)n Simple_repeat Simple_repeat 1 28 0 333 0 0 0 chr2 152919844 152919881 -100336702 + (GA)n Simple_repeat Simple_repeat 2 38 0 384 296 83 35 chr2 152919881 152920006 -100336577 - L1MB5 LINE L1 -1088 5086 4968 1682 176 37 40 chr2 152920006 152920382 -100336201 + THE1C LTR MaLR 1 375 0 384 296 83 35 chr2 152920382 152920491 -100336092 - L1MB5 LINE L1 -1206 4968 4738 1791 185 0 3 chr2 152920626 152920937 -100335646 - AluSx SINE Alu 0 310 1 499 261 73 21 chr2 152921168 152921506 -100335077 - MLT1H1 LTR MaLR -216 374 32 229 286 13 0 chr2 152922767 152922844 -100333739 - MLT1H1-int LTR MaLR -1286 85 8 569 268 187 52 chr2 152922853 152923312 -100333271 - MLT1H1 LTR MaLR -2 553 33 229 360 40 8 chr2 152923925 152924050 -100332533 + MIR SINE MIR 15 143 -119 1668 197 0 16 chr2 152924056 152924361 -100332222 + AluJo SINE Alu 1 300 -12 394 220 19 135 chr2 152924808 152925067 -100331516 - L1MEd LINE L1 -4886 1233 1005 194 0 39 0 chr2 152925241 152925267 -100331316 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 399 303 74 34 chr2 152925344 152925641 -100330942 + MLT1I LTR MaLR 17 325 -84 2024 136 0 0 chr2 152926277 152926556 -100330027 + AluSx SINE Alu 1 279 -33 342 0 0 0 chr2 152926556 152926594 -100329989 + (CA)n Simple_repeat Simple_repeat 1 38 0 674 11 23 0 chr2 152926935 152927022 -100329561 - L1PA4 LINE L1 -1 6154 6066 519 326 77 55 chr2 152930040 152930134 -100326449 - L2 LINE L2 -1 3312 3222 2899 102 41 5 chr2 152930134 152930576 -100326007 + L1PA13 LINE L1 5702 6159 -4 519 326 77 55 chr2 152930576 152931255 -100325328 - L2 LINE L2 -91 3222 2466 183 204 0 0 chr2 152931684 152931728 -100324855 + (TA)n Simple_repeat Simple_repeat 2 45 0 2409 44 20 3 chr2 152931991 152932284 -100324299 + AluY SINE Alu 1 298 -13 235 250 16 16 chr2 152933434 152933498 -100323085 - L2 LINE L2 0 3313 3250 430 278 58 17 chr2 152933624 152933797 -100322786 + MLT1J LTR MaLR 1 180 -331 703 270 97 45 chr2 152933963 152934252 -100322331 + MLT1J1 LTR MaLR 2 305 -141 26 0 0 0 chr2 152935588 152935614 -100320969 + AT_rich Low_complexity Low_complexity 1 26 0 344 246 26 70 chr2 152935883 152936153 -100320430 + MLT1J1 LTR MaLR 110 408 -38 219 36 0 0 chr2 152937021 152937049 -100319534 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 286 308 45 45 chr2 152937378 152937511 -100319072 - L2 LINE L2 0 3313 3181 658 275 22 44 chr2 152937647 152937876 -100318707 - MIR SINE MIR 0 262 39 316 273 121 23 chr2 152938351 152938483 -100318100 - L2 LINE L2 -1 3312 3168 23 54 0 0 chr2 152938497 152938534 -100318049 + AT_rich Low_complexity Low_complexity 1 37 0 2303 98 0 0 chr2 152939556 152939861 -100316722 + AluSc SINE Alu 1 305 -4 21 36 0 0 chr2 152940031 152940059 -100316524 + AT_rich Low_complexity Low_complexity 1 28 0 381 263 67 38 chr2 152940578 152940787 -100315796 + MER113 DNA MER1_type? 1 215 -306 210 250 0 114 chr2 152941880 152941968 -100314615 - MER5A DNA MER1_type -26 163 86 3147 26 0 18 chr2 152943142 152943525 -100313058 - L1PA4 LINE L1 -4 6151 5776 325 250 83 56 chr2 152943891 152944035 -100312548 + MIR SINE MIR 37 184 -78 379 297 60 69 chr2 152944984 152945476 -100311107 + L1ME LINE L1 888 1369 -5578 271 206 101 0 chr2 152945880 152945967 -100310616 + L1ME LINE L1 1583 1765 -5182 22 56 0 0 chr2 152945967 152946003 -100310580 + AT_rich Low_complexity Low_complexity 1 36 0 28 29 0 0 chr2 152946042 152946077 -100310506 + AT_rich Low_complexity Low_complexity 1 35 0 678 214 38 14 chr2 152946154 152946190 -100310393 + L1MA4 LINE L1 4337 4371 -1775 2534 49 3 0 chr2 152946190 152946497 -100310086 + AluY SINE Alu 1 308 -3 678 214 38 14 chr2 152946497 152946680 -100309903 + L1MA4 LINE L1 4371 4547 -1599 * 6041 152 26 12 chr2 152946663 152948019 -100308564 + L1MA4 LINE L1 4920 6298 -2 416 260 78 49 chr2 152948038 152948410 -100308173 + L1ME LINE L1 1825 2351 -4787 26 0 0 0 chr2 152948981 152949007 -100307576 + AT_rich Low_complexity Low_complexity 1 26 0 435 296 95 6 chr2 152949069 152949238 -100307345 - MIR SINE MIR -15 247 64 761 175 119 12 chr2 152949408 152949568 -100307015 + MER3 DNA MER1_type 8 184 -25 435 340 49 0 chr2 152950039 152950183 -100306400 + MIR3 SINE MIR 37 187 -21 29 47 0 0 chr2 152951611 152951654 -100304929 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr2 152952481 152952502 -100304081 + AT_rich Low_complexity Low_complexity 1 21 0 282 56 0 0 chr2 152952811 152952847 -100303736 + (TG)n Simple_repeat Simple_repeat 2 37 0 394 340 115 30 chr2 152953329 152953826 -100302757 + L1 LINE L1 4861 5399 -747 1632 159 28 3 chr2 152954164 152954447 -100302136 + L1MC2 LINE L1 5866 6155 -189 2375 62 0 39 chr2 152954477 152954782 -100301801 + AluY SINE Alu 1 293 -18 525 32 0 0 chr2 152954782 152954845 -100301738 + (TA)n Simple_repeat Simple_repeat 1 63 0 1092 170 0 0 chr2 152954852 152955011 -100301572 + FRAM SINE Alu 1 158 -18 1875 158 19 68 chr2 152955016 152955426 -100301157 + MLT1B LTR MaLR 1 390 0 208 343 0 15 chr2 152955610 152955677 -100300906 + L2 LINE L2 2550 2615 -699 279 254 154 18 chr2 152955708 152955818 -100300765 - L2 LINE L2 0 3313 3189 * 301 376 76 26 chr2 152955812 152956200 -100300383 + L2 LINE L2 2632 3035 -237 221 271 17 0 chr2 152957134 152957193 -100299390 + GA-rich Low_complexity Low_complexity 3 62 0 382 287 10 0 chr2 152957549 152957650 -100298933 - LTR33 LTR ERVL -412 109 8 208 254 51 17 chr2 152958215 152958274 -100298309 - MIR SINE MIR -74 188 128 1421 135 20 20 chr2 152958442 152958687 -100297896 + L1MC1 LINE L1 6089 6333 0 680 290 58 53 chr2 152958902 152959319 -100297264 - MLT1H LTR MaLR -130 419 1 513 313 15 10 chr2 152959560 152959758 -100296825 + LTR16C LTR ERVL 255 453 -38 507 279 10 0 chr2 152959954 152960058 -100296525 + MER81 DNA DNA 5 109 -5 1844 331 98 43 chr2 152960170 152961334 -100295249 - L3 LINE CR1 -26 1551 324 574 157 109 54 chr2 152961339 152961475 -100295108 + MER99 DNA DNA 2 145 -683 1523 233 87 7 chr2 152961475 152961872 -100294711 + MLT2B1 LTR ERVL 2 489 -31 186 71 0 0 chr2 152961872 152961900 -100294683 + (TA)n Simple_repeat Simple_repeat 1 28 0 1523 233 87 7 chr2 152961900 152961927 -100294656 + MLT2B1 LTR ERVL 489 512 -8 2368 198 119 22 chr2 152961929 152962551 -100294032 + MER99 DNA DNA 144 825 -3 790 204 0 0 chr2 152962575 152962707 -100293876 + FLAM_A SINE Alu 1 132 -1 233 312 43 11 chr2 152962875 152962968 -100293615 - L2 LINE L2 -27 3245 3150 284 243 90 12 chr2 152965546 152965658 -100290925 - MLT1H LTR MaLR -4 586 437 1187 161 76 5 chr2 152965690 152965914 -100290669 + MER50 LTR ERV1 1 240 -494 * 1756 124 4 8 chr2 152965897 152966163 -100290420 + MER50 LTR ERV1 433 697 -37 2601 236 77 30 chr2 152966184 152967037 -100289546 + MER97a DNA MER1_type? 1 893 -1 649 289 78 40 chr2 152967047 152967340 -100289243 - MLT1H LTR MaLR -212 330 74 278 291 68 26 chr2 152967956 152968073 -100288510 + L2 LINE L2 3192 3313 0 901 216 17 17 chr2 152968780 152968956 -100287627 - MER5A DNA MER1_type -2 187 12 181 225 75 0 chr2 152969703 152969743 -100286840 + L2 LINE L2 3230 3272 0 216 284 211 0 chr2 152970023 152970132 -100286451 + MIR SINE MIR 5 136 -126 814 206 50 20 chr2 152970389 152970588 -100285995 + MER63A DNA MER1_type 3 207 -3 249 281 62 47 chr2 152973283 152973411 -100283172 + MIR SINE MIR 63 192 -70 2063 78 8 0 chr2 152974490 152974745 -100281838 + AluY SINE Alu 40 296 -15 464 270 71 0 chr2 152974956 152975082 -100281501 - MIR3 SINE MIR -3 205 71 41 36 0 0 chr2 152975321 152975376 -100281207 + AT_rich Low_complexity Low_complexity 1 55 0 419 277 36 36 chr2 152976519 152976656 -100279927 - MIR SINE MIR -118 144 8 246 343 0 0 chr2 152977466 152977568 -100279015 + (TG)n Simple_repeat Simple_repeat 2 103 0 252 275 63 35 chr2 152977810 152977952 -100278631 + HAL1b LINE L1 336 481 -867 545 357 66 59 chr2 152977964 152978553 -100278030 + L2 LINE L2 2686 3271 -1 268 221 67 0 chr2 152978843 152978947 -100277636 + L1ME4a LINE L1 6008 6118 -3 717 179 0 0 chr2 152978994 152979106 -100277477 + FLAM_C SINE Alu 7 118 -25 422 281 0 44 chr2 152979189 152979324 -100277259 + MLT1L LTR MaLR 161 289 -326 3695 154 31 0 chr2 152979520 152980136 -100276447 - L1PA16 LINE L1 -9 6157 5523 1042 234 41 0 chr2 152980468 152980686 -100275897 + L1MD1 LINE L1 27 253 -6287 2751 169 70 5 chr2 152980689 152981299 -100275284 + L1MD1 LINE L1 1570 2219 -4321 * 2775 217 22 53 chr2 152981291 152982756 -100273827 + L1MD1 LINE L1 4859 6288 -348 1949 180 3 17 chr2 152982753 152983099 -100273484 + L1PB4 LINE L1 5763 6105 -51 * 2075 144 24 24 chr2 152983099 152983474 -100273109 + THE1C LTR MaLR 1 375 0 1949 180 3 17 chr2 152983474 152983489 -100273094 + L1PB4 LINE L1 6105 6119 -37 1594 186 58 41 chr2 152983498 152983892 -100272691 + L1MD1 LINE L1 5839 6242 0 376 227 0 31 chr2 152984464 152984561 -100272022 + MLT1I LTR MaLR 316 409 0 521 214 32 0 chr2 152984664 152984790 -100271793 - MER103 DNA DNA -30 136 7 717 149 0 0 chr2 152984869 152984976 -100271607 + U6 snRNA snRNA 1 107 0 336 226 43 21 chr2 152985328 152985421 -100271162 + L1ME4a LINE L1 5978 6072 -49 246 62 0 0 chr2 152985837 152985869 -100270714 + (CACCAT)n Simple_repeat Simple_repeat 1 32 0 26180 137 20 11 chr2 152986473 152990254 -100266329 - L1PA8 LINE L1 -4 6483 2736 252 59 0 0 chr2 152990254 152990288 -100266295 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 26180 137 20 11 chr2 152990288 152991663 -100264920 - L1PA8 LINE L1 -3751 2736 1206 225 0 0 0 chr2 152991663 152991688 -100264895 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 26180 137 20 11 chr2 152991688 152992037 -100264546 - L1PA8 LINE L1 -5281 1206 862 186 189 0 0 chr2 152992177 152992214 -100264369 + (TATATG)n Simple_repeat Simple_repeat 6 42 0 2168 288 106 12 chr2 152993445 152994601 -100261982 + L2 LINE L2 2047 3312 -1 235 383 13 67 chr2 152994608 152994757 -100261826 - L2 LINE L2 -88 3184 3044 236 361 62 0 chr2 152995024 152995121 -100261462 - L2 LINE L2 -15 3257 3155 2154 133 33 28 chr2 152996542 152996904 -100259679 - THE1B LTR MaLR 0 364 1 204 271 34 0 chr2 152997803 152997862 -100258721 - MIR SINE MIR -46 216 156 198 0 0 0 chr2 152997868 152997890 -100258693 + (A)n Simple_repeat Simple_repeat 1 22 0 329 115 0 16 chr2 152998025 152998086 -100258497 + (TG)n Simple_repeat Simple_repeat 1 60 0 205 375 106 14 chr2 152998558 152998833 -100257750 + L2 LINE L2 2290 2589 -725 293 322 96 38 chr2 152998858 152999157 -100257426 + L2 LINE L2 2741 3060 -212 2169 138 0 0 chr2 152999313 152999715 -100256868 - AluSq SINE Alu 0 402 1 316 358 31 38 chr2 153001210 153001503 -100255080 - L3 LINE CR1 -354 1223 933 199 250 139 56 chr2 153001741 153001849 -100254734 - L2 LINE L2 -34 3279 3163 645 265 22 49 chr2 153002022 153002207 -100254376 - MIR SINE MIR -59 203 24 1832 250 111 9 chr2 153003075 153003636 -100252947 + L1ME3A LINE L1 5544 6161 -9 453 309 42 12 chr2 153004462 153004630 -100251953 - MIR SINE MIR -8 254 82 464 211 59 72 chr2 153004637 153004789 -100251794 - MER58C DNA MER1_type 0 215 66 212 333 74 0 chr2 153004872 153004926 -100251657 + MIR SINE MIR 21 78 -184 930 243 67 13 chr2 153004930 153005169 -100251414 - MIR SINE MIR -10 252 1 445 253 21 90 chr2 153006082 153006315 -100250268 + L2 LINE L2 3097 3313 0 267 288 7 65 chr2 153007539 153007692 -100248891 + L3 LINE CR1 1103 1246 -331 204 40 0 0 chr2 153009334 153009359 -100247224 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 243 268 207 0 chr2 153009480 153009562 -100247021 + MIR3 SINE MIR 98 196 -12 187 328 33 16 chr2 153009828 153009889 -100246694 + MIR3 SINE MIR 128 189 -19 289 304 10 10 chr2 153010752 153010854 -100245729 - MIR3 SINE MIR -4 204 103 1972 186 6 11 chr2 153011015 153011380 -100245203 - MLT1A1 LTR MaLR -2 363 1 285 318 28 28 chr2 153011512 153011619 -100244964 - MIR3 SINE MIR -9 199 93 193 288 55 41 chr2 153014019 153014092 -100242491 + MIR SINE MIR 3 76 -186 376 117 143 0 chr2 153014130 153014207 -100242376 - MIR SINE MIR -120 142 55 1402 158 254 9 chr2 153014256 153014598 -100241985 + MSTA LTR MaLR 1 426 -2 440 345 42 0 chr2 153014620 153014788 -100241795 + MIR SINE MIR 88 262 0 806 269 180 57 chr2 153015265 153015582 -100241001 + MLT1L LTR MaLR 44 443 -172 1586 196 17 3 chr2 153015582 153015883 -100240700 + AluJb SINE Alu 1 305 -7 806 269 180 57 chr2 153015883 153016055 -100240528 + MLT1L LTR MaLR 443 593 -22 240 253 0 0 chr2 153016904 153016979 -100239604 + (CATA)n Simple_repeat Simple_repeat 2 76 0 531 0 0 0 chr2 153017004 153017063 -100239520 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 253 306 52 60 chr2 153017931 153018065 -100238518 - L2 LINE L2 -3 3269 3137 280 278 27 86 chr2 153018157 153018396 -100238187 + MIR SINE MIR 6 230 -32 228 305 127 15 chr2 153020832 153021010 -100235573 + MIR SINE MIR 5 201 -7 3596 122 54 4 chr2 153021277 153021835 -100234748 + MER39B LTR ERV1 1 586 -67 2199 90 3 45 chr2 153022159 153022469 -100234114 - AluSq SINE Alu -16 297 1 2221 127 5 30 chr2 153022743 153023232 -100233351 - MER51A LTR ERV1 0 634 1 800 231 22 70 chr2 153023269 153023498 -100233085 + MLT1I LTR MaLR 192 409 0 25 65 0 0 chr2 153024831 153024877 -100231706 + AT_rich Low_complexity Low_complexity 1 46 0 24 32 0 0 chr2 153025291 153025322 -100231261 + AT_rich Low_complexity Low_complexity 1 31 0 585 0 0 0 chr2 153029103 153029168 -100227415 + (GGAA)n Simple_repeat Simple_repeat 4 68 0 183 218 0 0 chr2 153030129 153030184 -100226399 + GA-rich Low_complexity Low_complexity 2 56 0 289 255 47 38 chr2 153030901 153031007 -100225576 + MER5A DNA MER1_type 81 187 -2 212 288 17 0 chr2 153031749 153031808 -100224775 - L2 LINE L2 -6 3266 3207 * 905 244 13 27 chr2 153031777 153032002 -100224581 - MIR SINE MIR -29 233 12 245 342 51 0 chr2 153032338 153032417 -100224166 + L2 LINE L2 3156 3238 -34 1135 251 126 11 chr2 153032812 153033186 -100223397 + MLT1G1 LTR MaLR 4 420 -175 509 227 60 32 chr2 153033156 153033341 -100223242 + MLT1F LTR MaLR 353 542 0 * 27 0 0 0 chr2 153034100 153034127 -100222456 + AT_rich Low_complexity Low_complexity 1 27 0 510 287 82 0 chr2 153034653 153034848 -100221735 + LTR33 LTR ERVL 5 215 -306 402 173 0 25 chr2 153034996 153035077 -100221506 + LTR33 LTR ERVL 443 521 0 518 286 5 20 chr2 153035253 153035456 -100221127 - L1ME4a LINE L1 -193 5928 5729 26 50 0 0 chr2 153035540 153035580 -100221003 + AT_rich Low_complexity Low_complexity 1 40 0 238 274 98 20 chr2 153036004 153036106 -100220477 - MIR SINE MIR -60 202 93 188 304 36 0 chr2 153036530 153036586 -100219997 - MIR3 SINE MIR -9 199 142 368 283 207 14 chr2 153041996 153042141 -100214442 + MIR SINE MIR 2 174 -88 875 155 13 26 chr2 153042142 153042297 -100214286 - FRAM SINE Alu -12 164 12 600 186 0 0 chr2 153042734 153042852 -100213731 + L1MD1 LINE L1 6114 6231 -11 258 337 11 21 chr2 153042892 153042987 -100213596 - MIR3 SINE MIR -4 204 111 593 75 0 0 chr2 153043159 153043239 -100213344 - MADE1 DNA Mariner 0 80 1 379 134 0 15 chr2 153043304 153043371 -100213212 - MLT1C LTR MaLR 0 467 402 1866 169 3 10 chr2 153043371 153043753 -100212830 + AluJb SINE Alu 1 380 0 1264 172 90 81 chr2 153043753 153044164 -100212419 - MLT1C LTR MaLR -56 408 1 219 171 26 66 chr2 153044479 153044555 -100212028 - L2 LINE L2 -74 3239 3167 186 213 115 66 chr2 153044599 153044660 -100211923 + L2 LINE L2 3203 3266 -6 22 0 0 0 chr2 153044696 153044718 -100211865 + AT_rich Low_complexity Low_complexity 1 22 0 696 282 61 5 chr2 153044734 153044947 -100211636 - MIR SINE MIR -31 231 7 275 316 60 8 chr2 153045703 153045820 -100210763 - MIR SINE MIR -70 138 16 22 0 0 0 chr2 153047323 153047345 -100209238 + AT_rich Low_complexity Low_complexity 1 22 0 603 276 183 32 chr2 153047528 153048060 -100208523 - L2 LINE L2 -4 3309 2694 192 417 43 24 chr2 153048166 153048420 -100208163 + L2 LINE L2 2571 2829 -485 711 110 18 0 chr2 153048662 153048771 -100207812 - HY1 scRNA scRNA -1 111 1 430 394 6 0 chr2 153048935 153049100 -100207483 - MIR3 SINE MIR -6 202 37 216 0 0 0 chr2 153049209 153049233 -100207350 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 181 368 45 23 chr2 153050156 153050289 -100206294 - MIR SINE MIR -25 237 102 437 322 6 60 chr2 153050351 153050534 -100206049 + MIR SINE MIR 20 192 -70 635 323 211 43 chr2 153051432 153052202 -100204381 + L2 LINE L2 1468 2108 -1205 2248 119 40 8 chr2 153052202 153052555 -100204028 - THE1B LTR MaLR 0 364 1 635 323 211 43 chr2 153052555 153052835 -100203748 + L2 LINE L2 2108 2340 -973 981 177 0 0 chr2 153052835 153052993 -100203590 - FAM SINE Alu -13 162 5 635 323 211 43 chr2 153052993 153053514 -100203069 + L2 LINE L2 2340 3313 0 5197 111 24 17 chr2 153053835 153054697 -100201886 - Tigger3(Golem) DNA MER2_type 0 3029 2162 2049 111 3 28 chr2 153054940 153055261 -100201322 - AluSx SINE Alu 0 314 1 22 0 0 0 chr2 153055304 153055326 -100201257 + AT_rich Low_complexity Low_complexity 1 22 0 27 29 0 0 chr2 153055416 153055450 -100201133 + AT_rich Low_complexity Low_complexity 1 34 0 989 256 18 0 chr2 153056908 153057127 -100199456 - MER58A DNA MER1_type 0 224 2 250 326 177 27 chr2 153058238 153058796 -100197787 - L2 LINE L2 -900 2414 1773 466 327 26 6 chr2 153061051 153061207 -100195376 + MIR SINE MIR 67 225 -37 468 306 52 43 chr2 153061239 153061684 -100194899 + L1ME LINE L1 5311 5759 -362 196 284 75 0 chr2 153062103 153062170 -100194413 - MIR SINE MIR -46 216 145 183 357 0 0 chr2 153062694 153062750 -100193833 + L2 LINE L2 3217 3272 0 1761 195 0 16 chr2 153063284 153063597 -100192986 - AluJb SINE Alu -4 308 1 209 259 17 0 chr2 153064789 153064847 -100191736 + CT-rich Low_complexity Low_complexity 2 60 0 375 169 0 0 chr2 153065511 153065582 -100191001 + (TGAA)n Simple_repeat Simple_repeat 3 73 0 540 159 80 0 chr2 153065711 153065824 -100190759 + L1MB7 LINE L1 6054 6175 -9 231 211 0 0 chr2 153068647 153068685 -100187898 - L2 LINE L2 -12 3301 3264 * 406 328 151 5 chr2 153068652 153068844 -100187739 - MIR SINE MIR -11 251 32 13006 119 39 84 chr2 153069909 153072106 -100184477 + Tigger1 DNA MER2_type 2 2072 -346 2280 108 0 0 chr2 153072106 153072403 -100184180 + AluSx SINE Alu 1 297 -15 13006 119 39 84 chr2 153072403 153072736 -100183847 + Tigger1 DNA MER2_type 2072 2418 0 325 333 26 0 chr2 153075075 153075192 -100181391 - MIR3 SINE MIR -50 158 39 2202 124 3 3 chr2 153075350 153075656 -100180927 + AluSq SINE Alu 5 310 -3 348 313 147 6 chr2 153078104 153078267 -100178316 - MER5A DNA MER1_type 0 189 4 202 330 48 29 chr2 153078450 153078553 -100178030 - L2 LINE L2 -10 3303 3199 189 307 98 59 chr2 153078713 153078866 -100177717 + L2 LINE L2 2151 2309 -1005 518 300 100 67 chr2 153079281 153079611 -100176972 + L2 LINE L2 2932 3272 0 333 0 0 0 chr2 153080690 153080727 -100175856 + (TC)n Simple_repeat Simple_repeat 2 38 0 354 246 70 0 chr2 153082145 153082259 -100174324 - L1ME4a LINE L1 -2 6119 5998 1169 162 26 0 chr2 153082996 153083257 -100173326 + L1MA8 LINE L1 5187 5462 -743 5907 95 131 83 chr2 153083257 153084744 -100171839 + pTR5 LTR ERV1 743 2438 0 3105 171 16 14 chr2 153084747 153085310 -100171273 + L1MA8 LINE L1 5459 6022 -269 1502 203 14 46 chr2 153085422 153085535 -100171048 + L1MA7 LINE L1 5930 6045 -246 2199 100 17 3 chr2 153085535 153085825 -100170758 + AluSx SINE Alu 1 294 -18 1502 203 14 46 chr2 153085825 153086081 -100170502 + L1MA7 LINE L1 6045 6287 -4 1692 217 68 14 chr2 153086605 153086960 -100169623 - MLT1A2 LTR MaLR 0 374 1 26 0 0 0 chr2 153087029 153087055 -100169528 + AT_rich Low_complexity Low_complexity 1 26 0 299 321 68 48 chr2 153087598 153087819 -100168764 - MIR SINE MIR -14 248 22 184 311 0 0 chr2 153087859 153087904 -100168679 - MIR SINE MIR -81 127 83 261 358 66 29 chr2 153088090 153088227 -100168356 - L2 LINE L2 -6 3266 3125 235 330 9 9 chr2 153089500 153089606 -100166977 + GA-rich Low_complexity Low_complexity 2 107 0 464 308 130 10 chr2 153090542 153090750 -100165833 + MIR SINE MIR 27 259 -3 224 273 15 0 chr2 153091008 153091074 -100165509 + L2 LINE L2 3247 3313 0 262 250 44 73 chr2 153091869 153092005 -100164578 - MIR SINE MIR -54 155 23 1976 138 0 28 chr2 153092328 153092647 -100163936 - AluSx SINE Alu -2 310 1 398 235 31 0 chr2 153092648 153092746 -100163837 - MIR SINE MIR -54 208 108 8496 86 20 2 chr2 153092779 153094686 -100161897 - L1PA7 LINE L1 -1 6153 4222 184 250 28 97 chr2 153094714 153094766 -100161817 - MIR SINE MIR -194 68 21 1998 198 87 23 chr2 153094766 153095205 -100161378 - MLT1C LTR MaLR 0 467 1 184 250 28 97 chr2 153095205 153095224 -100161359 - MIR SINE MIR -241 21 2 237 33 0 0 chr2 153095246 153095276 -100161307 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 3460 93 13 9 chr2 153095407 153095858 -100160725 + MLT2A2 LTR ERVL 1 453 0 286 264 190 35 chr2 153096019 153096193 -100160390 - MIR3 SINE MIR -4 204 4 303 195 11 69 chr2 153097829 153097916 -100158667 - L3 LINE CR1 -228 1349 1268 206 310 17 0 chr2 153097923 153097981 -100158602 - L3 LINE CR1 -949 628 570 2201 99 0 0 chr2 153099348 153099657 -100156926 - AluSq SINE Alu 0 309 1 183 323 46 0 chr2 153099844 153099909 -100156674 - MIR SINE MIR -11 251 184 432 37 0 0 chr2 153100495 153100549 -100156034 + (CAGG)n Simple_repeat Simple_repeat 2 55 0 240 86 0 0 chr2 153100550 153100585 -100155998 + (GGAA)n Simple_repeat Simple_repeat 3 37 0 1745 187 0 29 chr2 153100625 153100940 -100155643 - AluJb SINE Alu -6 306 1 259 294 47 12 chr2 153101317 153101402 -100155181 - L2 LINE L2 -4 3309 3222 187 302 0 0 chr2 153101466 153101519 -100155064 + L2 LINE L2 3251 3303 -10 183 80 0 0 chr2 153101520 153101545 -100155038 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 491 371 133 11 chr2 153101921 153102286 -100154297 + L2 LINE L2 2825 3235 -34 504 59 0 0 chr2 153102286 153102354 -100154229 + (TG)n Simple_repeat Simple_repeat 2 69 0 378 311 25 8 chr2 153103079 153103201 -100153382 - MIR SINE MIR -119 143 20 1731 163 42 33 chr2 153104664 153104996 -100151587 - THE1B LTR MaLR 0 364 30 277 282 13 0 chr2 153105549 153105627 -100150956 - MIR3 SINE MIR -119 89 11 245 288 27 27 chr2 153105730 153105841 -100150742 + L3 LINE CR1 677 787 -790 375 206 177 69 chr2 153106010 153106129 -100150454 - MLT1H LTR MaLR 0 642 449 866 292 21 0 chr2 153106255 153106498 -100150085 - MLT1H LTR MaLR -301 248 1 400 298 112 6 chr2 153106554 153106715 -100149868 - L3 LINE CR1 -231 1346 1169 511 301 113 9 chr2 153107670 153107883 -100148700 + MARNA DNA Mariner 262 496 -90 1133 208 23 5 chr2 153107972 153108188 -100148395 + MER58A DNA MER1_type 5 224 0 370 286 45 45 chr2 153108323 153108522 -100148061 - L1ME3A LINE L1 -10 6160 5962 2009 120 42 3 chr2 153108611 153108894 -100147689 + AluSx SINE Alu 1 294 -18 655 226 26 70 chr2 153108900 153109130 -100147453 - L1MC5 LINE L1 -440 7521 7302 281 308 124 24 chr2 153109235 153109437 -100147146 - MIR SINE MIR -36 226 4 343 259 136 0 chr2 153109492 153109573 -100147010 - L2 LINE L2 -13 3259 3168 549 285 123 31 chr2 153109882 153110035 -100146548 + MIR SINE MIR 4 186 -76 2085 184 28 0 chr2 153110035 153110389 -100146194 - MLT1A1 LTR MaLR -1 364 1 549 285 123 31 chr2 153110389 153110463 -100146120 + MIR SINE MIR 186 252 -10 208 327 96 10 chr2 153110911 153111015 -100145568 + L2 LINE L2 3149 3261 -11 362 302 76 6 chr2 153111569 153111741 -100144842 + MIR SINE MIR 65 248 -14 647 185 19 6 chr2 153112238 153112400 -100144183 + CT-rich Low_complexity Low_complexity 4 167 0 499 62 25 0 chr2 153113197 153113277 -100143306 + (TAGA)n Simple_repeat Simple_repeat 1 82 0 203 362 0 0 chr2 153113924 153113982 -100142601 + MIR SINE MIR 48 105 -103 188 271 0 17 chr2 153114165 153114224 -100142359 + MIR SINE MIR 90 147 -115 2152 62 44 7 chr2 153114240 153114548 -100142035 + AluY SINE Alu 1 318 0 442 248 62 9 chr2 153116361 153116474 -100140109 + MIR SINE MIR 14 132 -130 762 174 217 96 chr2 153117063 153117156 -100139427 + MLT1E1 LTR MaLR 4 84 -570 1955 113 0 63 chr2 153117156 153117489 -100139094 + AluSx SINE Alu 1 314 0 762 174 217 96 chr2 153117489 153117624 -100138959 + MLT1E1 LTR MaLR 84 261 -393 666 193 14 29 chr2 153117660 153117800 -100138783 + MLT1E1 LTR MaLR 400 537 -117 515 149 149 0 chr2 153117901 153118008 -100138575 + MSTB1 LTR MaLR 310 432 0 1734 221 118 59 chr2 153119938 153120495 -100136088 - MLT1G LTR MaLR 0 590 1 238 269 65 11 chr2 153120505 153120598 -100135985 - MIR SINE MIR -69 193 96 504 245 87 27 chr2 153121013 153121197 -100135386 - L2 LINE L2 0 3313 3119 559 289 20 30 chr2 153121255 153121452 -100135131 - L2 LINE L2 -467 2847 2653 1207 263 141 50 chr2 153121452 153121957 -100134626 + MLT1G1 LTR MaLR 4 554 -1 476 228 49 8 chr2 153121962 153122085 -100134498 - L2 LINE L2 -657 2657 2530 794 255 8 55 chr2 153122173 153122428 -100134155 - MIR SINE MIR -16 246 4 564 318 0 0 chr2 153122430 153122584 -100133999 + MIR3 SINE MIR 49 202 -6 321 248 220 21 chr2 153123314 153123455 -100133128 - MIR SINE MIR -92 170 2 593 141 64 14 chr2 153123616 153123740 -100132843 - MSTC LTR MaLR 0 396 234 701 205 10 8 chr2 153123781 153123926 -100132657 - MSTC LTR MaLR -215 150 3 194 313 131 10 chr2 153125633 153125732 -100130851 - L3 LINE CR1 -6 1571 1461 606 314 58 31 chr2 153125933 153126226 -100130357 - L3 LINE CR1 -355 1222 922 1987 153 0 7 chr2 153126252 153126560 -100130023 + AluSx SINE Alu 1 306 -6 284 283 19 66 chr2 153126839 153126945 -100129638 - MIR SINE MIR -147 115 15 254 329 133 21 chr2 153126954 153127097 -100129486 + MER5A DNA MER1_type 2 160 -29 204 320 13 13 chr2 153127547 153127625 -100128958 - L2 LINE L2 -470 2844 2767 1295 274 69 35 chr2 153127641 153128076 -100128507 + MLT1J2 LTR MaLR 1 450 0 486 286 62 28 chr2 153128478 153128656 -100127927 + MLT1J LTR MaLR 1 184 -327 186 43 0 0 chr2 153129279 153129302 -100127281 + (TG)n Simple_repeat Simple_repeat 2 24 0 2191 148 44 39 chr2 153129304 153129738 -100126845 - L1MB7 LINE L1 -12 6172 5737 189 171 0 0 chr2 153131014 153131049 -100125534 + (TG)n Simple_repeat Simple_repeat 2 36 0 342 45 0 0 chr2 153132559 153132603 -100123980 + (TG)n Simple_repeat Simple_repeat 2 45 0 248 250 0 0 chr2 153132706 153132758 -100123825 + CT-rich Low_complexity Low_complexity 3 54 0 1863 133 0 82 chr2 153133034 153133351 -100123232 + AluSx SINE Alu 1 291 -21 303 71 0 0 chr2 153133370 153133412 -100123171 + (GAAAA)n Simple_repeat Simple_repeat 2 43 0 21 0 0 0 chr2 153135479 153135500 -100121083 + AT_rich Low_complexity Low_complexity 1 21 0 380 326 153 0 chr2 153136746 153136961 -100119622 + MIR SINE MIR 1 248 -14 21 36 0 0 chr2 153138111 153138139 -100118444 + AT_rich Low_complexity Low_complexity 1 28 0 260 250 0 0 chr2 153138774 153138826 -100117757 + L2 LINE L2 3242 3293 -20 247 267 116 12 chr2 153138956 153139042 -100117541 + L2 LINE L2 3208 3302 -11 1851 163 3 14 chr2 153140178 153140473 -100116110 + AluJo SINE Alu 1 292 -20 2500 126 60 5 chr2 153141244 153141679 -100114904 + L1PA13 LINE L1 5703 6161 -2 554 291 75 15 chr2 153142482 153142743 -100113840 + L1M4 LINE L1 5518 5804 -362 227 301 7 22 chr2 153142840 153142976 -100113607 + (TA)n Simple_repeat Simple_repeat 1 134 0 256 181 108 12 chr2 153142995 153143078 -100113505 + L1ME4a LINE L1 6028 6118 -3 391 298 51 28 chr2 153143133 153143311 -100113272 + MIR SINE MIR 23 204 -58 180 375 0 0 chr2 153143917 153144005 -100112578 + L3b LINE CR1 1145 1232 -351 486 206 19 9 chr2 153144496 153144603 -100111980 - L2 LINE L2 0 3313 3206 603 220 0 0 chr2 153144732 153144989 -100111594 + (TGGA)n Simple_repeat Simple_repeat 1 257 0 2607 235 36 8 chr2 153145020 153145654 -100110929 - MER82 DNA MER2_type 0 653 2 513 194 0 22 chr2 153145666 153145800 -100110783 + (TGGA)n Simple_repeat Simple_repeat 3 133 0 371 219 29 80 chr2 153147550 153147687 -100108896 + MIR SINE MIR 15 144 -118 296 274 69 123 chr2 153147690 153147967 -100108616 + LTR67 LTR ERVL 2 263 -294 215 373 88 27 chr2 153148324 153148584 -100107999 + L2 LINE L2 2978 3253 -19 378 313 76 24 chr2 153149190 153149401 -100107182 + L2 LINE L2 902 1123 -2191 1501 337 125 27 chr2 153149470 153150487 -100106096 + L2 LINE L2 1638 2866 -447 2683 156 35 39 chr2 153150487 153151000 -100105583 - MLT2B2 LTR ERVL 0 515 5 1501 337 125 27 chr2 153151000 153151492 -100105091 + L2 LINE L2 2866 3309 -4 267 182 0 18 chr2 153153230 153153285 -100103298 + Tigger7 DNA MER2_type 1 54 -651 607 56 149 19 chr2 153153286 153153393 -100103190 + Tigger7 DNA MER2_type 2234 2354 -137 1132 87 0 0 chr2 153153393 153153543 -100103040 - AluSg/x SINE Alu -1 311 162 622 203 7 14 chr2 153153543 153153681 -100102902 + Tigger7 DNA MER2_type 2443 2579 -8 23 0 0 0 chr2 153153911 153153934 -100102649 + AT_rich Low_complexity Low_complexity 1 23 0 281 288 12 25 chr2 153154391 153154471 -100102112 - MIR SINE MIR -60 148 70 25 31 0 0 chr2 153154600 153154632 -100101951 + AT_rich Low_complexity Low_complexity 1 32 0 1723 224 37 4 chr2 153154969 153155459 -100101124 - Charlie4a DNA MER1_type 0 508 3 279 0 0 0 chr2 153156983 153157014 -100099569 + (CA)n Simple_repeat Simple_repeat 2 32 0 28542 114 12 67 chr2 153157087 153163581 -100093002 - L1PA7 LINE L1 -7 6147 22 187 278 24 95 chr2 153163691 153163817 -100092766 + L2 LINE L2 2702 2818 -496 189 339 43 43 chr2 153166116 153166231 -100090352 - L3 LINE CR1 -130 1447 1333 1489 180 13 43 chr2 153166461 153166766 -100089817 + AluJb SINE Alu 1 296 -16 23 0 0 0 chr2 153166818 153166841 -100089742 + AT_rich Low_complexity Low_complexity 1 23 0 329 358 21 21 chr2 153167089 153167279 -100089304 - L1MC/D LINE L1 -2220 5588 5399 280 179 103 39 chr2 153167282 153167360 -100089223 - L3 LINE CR1 -173 1404 1322 6359 179 50 11 chr2 153167363 153168761 -100087822 - Charlie1a DNA MER1_type 0 1455 3 1959 214 96 68 chr2 153168770 153169373 -100087210 + LTR41 LTR ERVL 3 652 -143 3362 126 2 22 chr2 153169373 153169922 -100086661 - L1PA13 LINE L1 -6 6157 5620 1959 214 96 68 chr2 153169922 153170069 -100086514 + LTR41 LTR ERVL 652 793 -2 405 160 0 0 chr2 153170477 153170552 -100086031 - MLT1D LTR MaLR 0 505 431 24 53 0 0 chr2 153170586 153170624 -100085959 + AT_rich Low_complexity Low_complexity 1 38 0 278 87 0 0 chr2 153170640 153170686 -100085897 + MLT1D LTR MaLR 437 482 -23 * 1603 174 62 62 chr2 153170685 153171117 -100085466 - MLT1D LTR MaLR -73 432 1 268 209 217 23 chr2 153173015 153173144 -100083439 - L2 LINE L2 -2 3311 3158 1861 151 70 12 chr2 153174109 153174453 -100082130 + MLT1A1 LTR MaLR 1 364 -1 276 30 0 0 chr2 153174512 153174545 -100082038 + (TC)n Simple_repeat Simple_repeat 1 33 0 997 154 0 0 chr2 153174801 153174970 -100081613 + (TA)n Simple_repeat Simple_repeat 1 169 0 210 118 0 0 chr2 153174992 153175026 -100081557 + (TGAA)n Simple_repeat Simple_repeat 2 35 0 234 264 64 56 chr2 153175179 153175304 -100081279 + L2 LINE L2 605 730 -2584 755 256 47 17 chr2 153175969 153176203 -100080380 + MIR SINE MIR 16 256 -6 347 282 49 28 chr2 153176770 153176912 -100079671 - MER5A DNA MER1_type -9 180 36 181 243 27 0 chr2 153176959 153176996 -100079587 + L2 LINE L2 3239 3276 -37 1771 204 11 16 chr2 153178785 153179152 -100077431 - MLT1A1 LTR MaLR 0 365 1 455 249 157 35 chr2 153179408 153179620 -100076963 + MIR SINE MIR 11 248 -14 2552 42 0 10 chr2 153179869 153180178 -100076405 - AluY SINE Alu -5 306 1 586 209 0 0 chr2 153181129 153181239 -100075344 + MLT1F1 LTR MaLR 1 110 -457 280 102 0 41 chr2 153181274 153181323 -100075260 + L1PA16 LINE L1 6106 6152 -14 25 65 0 0 chr2 153181323 153181369 -100075214 + AT_rich Low_complexity Low_complexity 1 46 0 1343 231 57 30 chr2 153181853 153182260 -100074323 + MLT1F1 LTR MaLR 150 567 0 303 263 149 14 chr2 153182790 153182904 -100073679 + MER5B DNA MER1_type 5 116 -62 249 108 0 0 chr2 153183299 153183336 -100073247 + (TG)n Simple_repeat Simple_repeat 1 37 0 314 253 41 14 chr2 153183502 153183648 -100072935 + L1ME4a LINE L1 5968 6117 -4 21 67 0 0 chr2 153184756 153184786 -100071797 + AT_rich Low_complexity Low_complexity 1 30 0 646 145 0 8 chr2 153185009 153185126 -100071457 + (TAGA)n Simple_repeat Simple_repeat 1 116 0 234 0 0 0 chr2 153185592 153185618 -100070965 + (A)n Simple_repeat Simple_repeat 1 26 0 386 311 74 14 chr2 153186281 153186429 -100070154 - MIR SINE MIR -71 191 35 449 248 85 7 chr2 153186785 153186926 -100069657 - MER105 DNA DNA -2 202 51 341 252 23 0 chr2 153187153 153187284 -100069299 + MER113 DNA MER1_type? 44 177 -344 334 235 151 36 chr2 153187307 153187473 -100069110 + MER113 DNA MER1_type? 336 520 -1 199 231 19 0 chr2 153187487 153187539 -100069044 - L2 LINE L2 -6 3266 3214 1433 150 135 8 chr2 153188943 153189210 -100067373 - AluJb SINE Alu -11 301 1 542 82 0 0 chr2 153189367 153189440 -100067143 - L1PA7 LINE L1 -66 6088 6016 554 88 0 0 chr2 153189440 153189514 -100067069 + L1PA8 LINE L1 6091 6170 -2 701 231 6 26 chr2 153189830 153189986 -100066597 + MER5B DNA MER1_type 26 178 0 1577 146 47 33 chr2 153190318 153190593 -100065990 - AluJo SINE Alu -31 281 3 22 0 0 0 chr2 153190595 153190617 -100065966 + AT_rich Low_complexity Low_complexity 1 22 0 455 309 102 29 chr2 153190702 153190897 -100065686 - L3 LINE CR1 -473 1104 876 228 111 0 0 chr2 153190897 153190933 -100065650 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 455 309 102 29 chr2 153190933 153191051 -100065532 - L3 LINE CR1 -701 876 768 339 25 0 0 chr2 153192790 153192830 -100063753 + (CA)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr2 153195541 153195562 -100061021 + AT_rich Low_complexity Low_complexity 1 21 0 186 347 0 91 chr2 153196640 153196816 -100059767 + MIR3 SINE MIR 12 171 -37 489 260 80 55 chr2 153197224 153197424 -100059159 + L2 LINE L2 3072 3276 -37 234 0 0 0 chr2 153197511 153197537 -100059046 + (TG)n Simple_repeat Simple_repeat 2 27 0 219 69 0 0 chr2 153197542 153197571 -100059012 + (TA)n Simple_repeat Simple_repeat 2 30 0 355 290 166 41 chr2 153197664 153197809 -100058774 + MER5A DNA MER1_type 26 188 -1 270 116 0 0 chr2 153199456 153199499 -100057084 + (CAT)n Simple_repeat Simple_repeat 2 44 0 807 237 6 6 chr2 153199499 153199676 -100056907 - MIR SINE MIR -8 254 78 2154 100 7 13 chr2 153200757 153201058 -100055525 - AluSx SINE Alu -13 299 1 2343 73 0 7 chr2 153201221 153201523 -100055060 - AluY SINE Alu -11 300 1 1938 139 10 10 chr2 153201868 153202178 -100054405 - AluSx SINE Alu -2 310 1 675 331 142 27 chr2 153202456 153202906 -100053677 - MLT1K LTR MaLR -66 522 21 207 0 0 0 chr2 153202908 153202931 -100053652 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 519 279 25 99 chr2 153203691 153204099 -100052484 + L1ME4a LINE L1 5449 5811 -310 2269 119 7 0 chr2 153204099 153204402 -100052181 + AluSx SINE Alu 1 305 -7 519 279 25 99 chr2 153204402 153204517 -100052066 + L1ME4a LINE L1 5811 5933 -188 871 198 72 27 chr2 153205192 153205414 -100051169 + MIR SINE MIR 31 262 0 439 284 30 111 chr2 153205423 153205793 -100050790 - L1ME4a LINE L1 -229 5892 5553 1490 173 86 138 chr2 153206472 153207021 -100049562 - MLT2B1 LTR ERVL 0 520 1 296 293 61 0 chr2 153207730 153207829 -100048754 + MIR SINE MIR 94 198 -64 845 185 19 6 chr2 153209519 153209676 -100046907 - MER5A DNA MER1_type -4 185 27 194 338 42 0 chr2 153209818 153209889 -100046694 + L3 LINE CR1 1440 1513 -64 204 154 0 26 chr2 153210159 153210198 -100046385 + CT-rich Low_complexity Low_complexity 1 38 0 2060 295 89 53 chr2 153210198 153211841 -100044742 + L2 LINE L2 1607 3313 0 422 300 40 7 chr2 153212078 153212228 -100044355 - MLT1I LTR MaLR -254 155 1 371 51 0 85 chr2 153212318 153212377 -100044206 + LTR32 LTR ERVL 15 68 -403 2627 151 20 7 chr2 153212377 153212822 -100043761 + LTR32 LTR ERVL 15 465 -6 293 259 63 133 chr2 153212938 153213029 -100043554 + L2 LINE L2 3137 3216 -56 1968 122 7 30 chr2 153213029 153213333 -100043250 - AluSx SINE Alu -15 297 1 293 259 63 133 chr2 153213333 153213384 -100043199 + L2 LINE L2 3216 3269 -3 180 0 0 0 chr2 153213398 153213418 -100043165 + (TG)n Simple_repeat Simple_repeat 2 21 0 358 169 99 0 chr2 153214312 153214383 -100042200 + MIR SINE MIR 92 169 -93 655 289 55 50 chr2 153214707 153215108 -100041475 + L1MC4a LINE L1 5528 5930 -1878 202 321 23 76 chr2 153215543 153215674 -100040909 - L2 LINE L2 -6 3307 3184 234 237 149 26 chr2 153215782 153215896 -100040687 + MIR SINE MIR 65 192 -70 194 323 143 23 chr2 153216881 153217014 -100039569 - MIR3 SINE MIR -53 155 7 259 346 14 57 chr2 153217789 153217956 -100038627 + MER5B DNA MER1_type 19 189 0 508 306 117 46 chr2 153218240 153218521 -100038062 - L2 LINE L2 -8 3305 3005 847 189 53 0 chr2 153218571 153218740 -100037843 + MER5B DNA MER1_type 1 178 0 900 300 106 10 chr2 153218795 153219192 -100037391 - L2 LINE L2 -450 2864 2430 1662 207 58 36 chr2 153220062 153220512 -100036071 - MLT1C LTR MaLR 0 467 8 180 0 0 0 chr2 153220929 153220949 -100035634 + (T)n Simple_repeat Simple_repeat 1 20 0 224 39 0 0 chr2 153222372 153222398 -100034185 + (CAA)n Simple_repeat Simple_repeat 2 27 0 716 195 8 0 chr2 153222757 153222885 -100033698 + FLAM_A SINE Alu 4 132 -1 23 62 0 0 chr2 153222886 153222918 -100033665 + AT_rich Low_complexity Low_complexity 1 32 0 242 290 65 21 chr2 153223771 153223864 -100032719 - MIR SINE MIR -108 154 58 409 294 42 8 chr2 153224954 153225073 -100031510 - MIR SINE MIR -56 152 30 762 287 57 16 chr2 153225240 153225554 -100031029 - MER102b DNA MER1_type -14 327 1 356 291 199 0 chr2 153227973 153228124 -100028459 + MER5A DNA MER1_type 9 189 0 499 248 118 19 chr2 153228132 153228293 -100028290 + MER5B DNA MER1_type 1 177 -1 192 352 0 28 chr2 153228337 153228408 -100028175 - MIR SINE MIR -154 108 40 * 538 244 106 28 chr2 153228407 153228587 -100027996 + MIR SINE MIR 14 207 -55 486 315 90 56 chr2 153228678 153229122 -100027461 - L2 LINE L2 -2 3270 2812 380 258 102 18 chr2 153229676 153229901 -100026682 - L1ME4a LINE L1 -2 6119 5876 324 60 0 0 chr2 153230313 153230363 -100026220 + Alu SINE Alu 251 300 0 657 287 68 48 chr2 153230937 153231230 -100025353 + L2 LINE L2 3014 3312 -1 321 274 212 17 chr2 153232427 153232606 -100023977 + MIR SINE MIR 47 260 -2 272 256 181 19 chr2 153232910 153233070 -100023513 - L2 LINE L2 -1370 1944 1759 918 229 50 18 chr2 153233350 153233587 -100022996 + MIR SINE MIR 24 262 0 242 250 89 13 chr2 153233852 153233985 -100022598 - MIR SINE MIR -35 227 29 1072 284 101 39 chr2 153234097 153234529 -100022054 + MLT1H LTR MaLR 1 503 -46 1436 201 53 66 chr2 153234529 153234908 -100021675 - MLT1A2 LTR MaLR 0 374 1 1072 284 101 39 chr2 153234908 153234959 -100021624 + MLT1H LTR MaLR 503 549 0 757 256 67 26 chr2 153235338 153235657 -100020926 - MLT1J LTR MaLR -105 406 28 860 328 83 51 chr2 153235926 153236904 -100019679 + L2 LINE L2 2244 3263 -9 377 265 68 8 chr2 153237241 153237358 -100019225 + L2 LINE L2 3186 3309 -4 1336 330 72 35 chr2 153237704 153238678 -100017905 + L2 LINE L2 2244 3263 -9 374 268 49 32 chr2 153239016 153239139 -100017444 + L2 LINE L2 3185 3309 -4 21 36 0 0 chr2 153239243 153239271 -100017312 + AT_rich Low_complexity Low_complexity 1 28 0 299 243 29 52 chr2 153239451 153239587 -100016996 - MIR SINE MIR -72 190 58 2263 184 52 27 chr2 153239600 153240045 -100016538 - MER21B LTR ERV1 -20 843 388 399 244 0 0 chr2 153240033 153240111 -100016472 - MER21B LTR ERV1 -769 94 17 * 286 235 106 12 chr2 153240865 153240950 -100015633 - MER5A DNA MER1_type -84 105 13 1987 119 93 40 chr2 153241119 153241473 -100015110 - THE1C LTR MaLR -2 373 1 1166 278 120 5 chr2 153241479 153241894 -100014689 - LTR33A LTR ERVL -8 515 67 304 175 0 35 chr2 153241959 153242016 -100014567 + L2 LINE L2 3217 3271 -1 564 299 23 11 chr2 153242561 153242738 -100013845 - MIR SINE MIR -55 207 29 1910 156 71 9 chr2 153243538 153243878 -100012705 - MER46B DNA MER2_type 0 236 1 198 0 0 0 chr2 153243946 153243968 -100012615 + (A)n Simple_repeat Simple_repeat 1 22 0 630 276 96 76 chr2 153244151 153244495 -100012088 - MLT1H LTR MaLR -194 355 5 552 269 93 93 chr2 153244556 153245020 -100011563 + L2 LINE L2 2804 3267 -5 2118 109 17 3 chr2 153245092 153245386 -100011197 + AluSx SINE Alu 1 298 -14 1589 151 43 49 chr2 153245555 153245879 -100010704 - MER33 DNA MER1_type -2 322 1 189 316 105 0 chr2 153246534 153246591 -100009992 - MIR3 SINE MIR -54 154 92 21 0 0 0 chr2 153247374 153247395 -100009188 + AT_rich Low_complexity Low_complexity 1 21 0 2373 99 0 0 chr2 153247549 153247861 -100008722 + AluSq SINE Alu 1 312 -1 665 227 81 20 chr2 153249418 153249616 -100006967 - MIR SINE MIR -44 218 9 886 259 24 0 chr2 153250395 153250607 -100005976 - MIR SINE MIR -5 257 41 947 158 6 6 chr2 153250617 153250775 -100005808 - AluJb SINE Alu -18 294 137 26 30 0 0 chr2 153252254 153252287 -100004296 + AT_rich Low_complexity Low_complexity 1 33 0 2116 96 28 7 chr2 153252499 153252790 -100003793 - AluSg1 SINE Alu -12 297 1 188 246 0 53 chr2 153253007 153253064 -100003519 + MER5A DNA MER1_type 136 189 0 462 285 56 34 chr2 153253269 153253448 -100003135 - MIR3 SINE MIR -10 198 16 542 15 0 15 chr2 153253679 153253747 -100002836 + (TAGA)n Simple_repeat Simple_repeat 3 69 0 219 302 0 0 chr2 153253856 153253909 -100002674 - L2 LINE L2 -4 3268 3216 1498 204 91 59 chr2 153254394 153254834 -100001749 - MSTB2 LTR MaLR -3 454 1 3809 230 45 27 chr2 153256370 153257260 -99999323 + L1MEc LINE L1 56 971 -5425 1309 164 23 5 chr2 153257260 153257474 -99999109 - MER20 DNA MER1_type 0 219 2 3809 230 45 27 chr2 153257474 153257668 -99998915 + L1MEc LINE L1 971 1160 -5236 560 304 48 35 chr2 153257853 153258083 -99998500 - MIR SINE MIR -16 246 14 666 244 35 63 chr2 153258696 153258817 -99997766 + L1MEc LINE L1 851 974 -5422 1337 164 24 0 chr2 153258817 153259030 -99997553 - MER20 DNA MER1_type 0 219 2 666 244 35 63 chr2 153259030 153259227 -99997356 + L1MEc LINE L1 974 1160 -5236 560 304 48 35 chr2 153259412 153259642 -99996941 - MIR SINE MIR -16 246 14 204 214 24 0 chr2 153260104 153260146 -99996437 + L2 LINE L2 3214 3256 -16 21 0 0 0 chr2 153261132 153261153 -99995430 + AT_rich Low_complexity Low_complexity 1 21 0 1576 154 45 41 chr2 153261502 153261794 -99994789 - AluSx SINE Alu -18 294 2 197 391 11 0 chr2 153261970 153262062 -99994521 + L2 LINE L2 3114 3206 -66 464 221 93 50 chr2 153262063 153262203 -99994380 + L2 LINE L2 3168 3313 0 293 379 52 0 chr2 153263554 153263670 -99992913 - L2 LINE L2 0 3272 3151 273 158 195 61 chr2 153265739 153265821 -99990762 + MLT1C LTR MaLR 8 100 -367 5517 145 228 86 chr2 153265870 153267356 -99989227 - pTR5 LTR ERV1 0 2438 743 986 232 97 16 chr2 153267356 153267675 -99988908 + MLT1C LTR MaLR 115 459 -8 1764 106 4 0 chr2 153268299 153268545 -99988038 - L1MA5A LINE L1 -3 6294 6048 961 270 132 42 chr2 153268555 153269010 -99987573 - MLT1L LTR MaLR -17 598 103 309 258 65 11 chr2 153269077 153269170 -99987413 + MLT1L LTR MaLR 1 98 -517 213 163 0 0 chr2 153269400 153269449 -99987134 + GA-rich Low_complexity Low_complexity 2 50 0 198 303 243 20 chr2 153271688 153271840 -99984743 + MIR3 SINE MIR 20 205 -3 1955 146 119 99 chr2 153272172 153272625 -99983958 + MLT2B2 LTR ERVL 4 465 -50 1371 183 37 7 chr2 153272626 153272899 -99983684 + Tigger2a DNA MER2_type 1 281 -153 228 35 0 0 chr2 153273812 153273841 -99982742 + (T)n Simple_repeat Simple_repeat 1 29 0 772 283 34 17 chr2 153274468 153274729 -99981854 - MIR SINE MIR 0 262 2 1275 212 117 49 chr2 153275802 153276213 -99980370 + MLT1J1 LTR MaLR 8 446 0 26 0 0 0 chr2 153276838 153276864 -99979719 + AT_rich Low_complexity Low_complexity 1 26 0 352 184 172 11 chr2 153277481 153277590 -99978993 + AluSg/x SINE Alu 181 303 0 2589 118 30 3 chr2 153277916 153278281 -99978302 - THE1C LTR MaLR 0 375 1 495 0 0 0 chr2 153278772 153278827 -99977756 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 1426 129 31 23 chr2 153280191 153280447 -99976136 - L1MA4 LINE L1 -5 6295 6038 1059 49 14 21 chr2 153280447 153280589 -99975994 - AluYb8 SINE Alu -11 307 167 9229 157 13 42 chr2 153280589 153281517 -99975066 - L1MA4 LINE L1 -251 6049 5096 2021 133 16 31 chr2 153281517 153281834 -99974749 - AluSx SINE Alu 0 312 1 9229 157 13 42 chr2 153281834 153282134 -99974449 - L1MA4 LINE L1 -1204 5096 4789 2105 142 7 0 chr2 153282134 153282444 -99974139 - AluSx SINE Alu 0 312 1 9229 157 13 42 chr2 153282444 153283767 -99972816 - L1MA4 LINE L1 -1511 4789 3562 203 321 194 8 chr2 153283862 153283996 -99972587 - MIR3 SINE MIR -46 162 4 22 35 0 0 chr2 153284419 153284448 -99972135 + AT_rich Low_complexity Low_complexity 1 29 0 7598 17 10 0 chr2 153284578 153285620 -99970963 - L1PA2 LINE L1 -1 6154 5104 12674 28 1 5 chr2 153285620 153287200 -99969383 + L1PA2 LINE L1 3534 5106 -1040 2023 241 48 6 chr2 153287199 153287723 -99968860 - MSTD-int LTR MaLR -1188 547 2 * 1256 239 66 21 chr2 153287725 153288102 -99968481 - MSTD LTR MaLR 0 396 3 348 333 67 0 chr2 153288710 153288860 -99967723 - MIR SINE MIR -6 256 97 2255 114 0 0 chr2 153288888 153289185 -99967398 - AluSq SINE Alu -16 297 1 4247 143 11 7 chr2 153289282 153290000 -99966583 + L1MB2 LINE L1 5448 6168 -3 681 213 20 7 chr2 153291880 153292030 -99964553 + MIR SINE MIR 98 249 -13 1864 111 31 126 chr2 153293715 153294129 -99962454 - THE1C LTR MaLR 0 375 1 421 280 46 100 chr2 153294228 153294467 -99962116 + MIR SINE MIR 13 238 -24 202 336 76 53 chr2 153295266 153295528 -99961055 + L2 LINE L2 2709 2976 -338 439 246 18 9 chr2 153295653 153295763 -99960820 - MER81 DNA DNA -1 113 3 558 289 91 5 chr2 153295878 153296065 -99960518 - MIR SINE MIR -30 232 30 22 0 0 0 chr2 153296699 153296721 -99959862 + AT_rich Low_complexity Low_complexity 1 22 0 238 137 147 78 chr2 153297758 153297785 -99958798 - L1ME4a LINE L1 -5 6116 6092 2586 135 18 34 chr2 153297785 153298222 -99958361 - MSTB1 LTR MaLR 0 432 3 238 137 147 78 chr2 153298222 153298296 -99958287 - L1ME4a LINE L1 -29 6092 6008 2316 91 0 3 chr2 153298434 153298730 -99957853 + AluSx SINE Alu 1 295 -17 295 257 138 35 chr2 153299040 153299517 -99957066 - HAL1 LINE L1 -1153 1354 803 2462 160 37 2 chr2 153299645 153300052 -99956531 - MSTB LTR MaLR -4 422 2 757 243 50 0 chr2 153300333 153300555 -99956028 + MER46C DNA MER2_type 2 234 -104 306 328 15 30 chr2 153301713 153301844 -99954739 + L2 LINE L2 3185 3313 0 1215 268 45 21 chr2 153301902 153302324 -99954259 + LTR16A LTR ERVL 18 449 -1 21 57 0 0 chr2 153302345 153302380 -99954203 + AT_rich Low_complexity Low_complexity 1 35 0 423 266 131 11 chr2 153302599 153302796 -99953787 + MIR SINE MIR 5 250 -12 306 306 21 7 chr2 153303270 153303414 -99953169 + L1M4 LINE L1 91 236 -6306 312 127 0 0 chr2 153303467 153303522 -99953061 + (CTG)n Simple_repeat Simple_repeat 3 57 0 1796 180 13 10 chr2 153303572 153303922 -99952661 + AluJo SINE Alu 1 351 0 2365 234 52 27 chr2 153304282 153305295 -99951288 + L1M4 LINE L1 875 1832 -4814 545 88 125 0 chr2 153305632 153305712 -99950871 - 5S rRNA rRNA -31 90 1 413 345 81 7 chr2 153306456 153306604 -99949979 + MIR3 SINE MIR 30 188 -20 216 97 0 0 chr2 153308624 153308655 -99947928 + (A)n Simple_repeat Simple_repeat 1 31 0 276 297 81 20 chr2 153308698 153308891 -99947692 - Charlie8 DNA MER1_type -2205 212 5 25 0 0 0 chr2 153309858 153309883 -99946700 + AT_rich Low_complexity Low_complexity 1 25 0 344 325 123 7 chr2 153311419 153311573 -99945010 + MIR3 SINE MIR 10 181 -27 183 222 22 22 chr2 153311592 153311637 -99944946 + MIR SINE MIR 104 148 -114 2257 128 0 3 chr2 153311694 153312007 -99944576 + AluSx SINE Alu 1 312 0 381 232 42 0 chr2 153312027 153312122 -99944461 + L2 LINE L2 3207 3305 -8 293 234 85 0 chr2 153312805 153312899 -99943684 - MER103 DNA DNA -56 110 9 710 296 36 24 chr2 153314320 153314570 -99942013 - MIR SINE MIR 0 262 10 382 83 28 0 chr2 153316401 153316473 -99940110 + (TAGA)n Simple_repeat Simple_repeat 1 74 0 1582 193 28 20 chr2 153316849 153317295 -99939288 + L1PA15-16 LINE L1 2536 2958 -3890 2237 160 40 7 chr2 153317305 153317730 -99938853 - Tigger2 DNA MER2_type 0 2718 2280 341 159 29 29 chr2 153317728 153317797 -99938786 - Tigger2 DNA MER2_type -2649 69 1 * 6008 187 18 1 chr2 153317800 153319078 -99937505 + L1 LINE L1 2970 4269 -2579 40896 38 24 1 chr2 153319093 153324776 -99931807 + L1P1 LINE L1 2 5811 -344 3229 29 3 0 chr2 153326199 153326582 -99930001 + L1PA3 LINE L1 5770 6153 -2 243 0 0 0 chr2 153326601 153326628 -99929955 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 3022 245 92 33 chr2 153326628 153327703 -99928880 + MSTD-int LTR MaLR 474 1733 -2 1505 223 44 18 chr2 153327705 153328091 -99928492 + MSTD LTR MaLR 1 396 0 294 301 30 75 chr2 153328495 153328628 -99927955 - L2 LINE L2 0 3272 3146 461 238 19 9 chr2 153328891 153328996 -99927587 + MIR SINE MIR 61 166 -96 1406 291 102 64 chr2 153329484 153330710 -99925873 - L2 LINE L2 -6 3307 2033 1342 249 40 53 chr2 153330718 153331345 -99925238 + L1MC4a LINE L1 5345 5963 -1845 637 215 63 13 chr2 153331532 153331690 -99924893 - L2 LINE L2 -1357 1957 1792 238 366 11 0 chr2 153331721 153331814 -99924769 + MIR SINE MIR 53 146 -116 1417 232 3 22 chr2 153333082 153333440 -99923143 - MLT1A2 LTR MaLR -23 351 1 256 252 189 18 chr2 153333511 153333622 -99922961 + MIR3 SINE MIR 30 159 -49 206 368 61 18 chr2 153335281 153335395 -99921188 - L2 LINE L2 -35 3237 3119 339 323 42 21 chr2 153335395 153335584 -99920999 - MIR SINE MIR 0 262 70 253 283 87 87 chr2 153335710 153335975 -99920608 - L2 LINE L2 -197 3075 2811 24 32 0 0 chr2 153336216 153336247 -99920336 + AT_rich Low_complexity Low_complexity 1 31 0 251 254 0 16 chr2 153336247 153336310 -99920273 - MIR SINE MIR 0 262 201 3270 111 81 14 chr2 153336367 153336861 -99919722 - MER1A DNA MER1_type 0 527 1 264 319 62 18 chr2 153337489 153337602 -99918981 + L2 LINE L2 3196 3313 0 1047 240 123 15 chr2 153337848 153338270 -99918313 + MLT1D LTR MaLR 18 386 -4 1115 228 145 25 chr2 153338293 153338802 -99917781 + L2 LINE L2 2450 3042 -271 23 0 0 0 chr2 153339073 153339096 -99917487 + AT_rich Low_complexity Low_complexity 1 23 0 230 314 0 12 chr2 153340088 153340174 -99916409 + 5S rRNA rRNA 32 116 -5 296 278 6 102 chr2 153340534 153340710 -99915873 + L2 LINE L2 2570 2728 -586 463 237 10 0 chr2 153340775 153340872 -99915711 - L2 LINE L2 -51 3262 3165 657 36 0 0 chr2 153340873 153340957 -99915626 + (TA)n Simple_repeat Simple_repeat 2 85 0 842 264 108 54 chr2 153341032 153341422 -99915161 - L2 LINE L2 -443 2871 2461 25 51 0 0 chr2 153342755 153342794 -99913789 + AT_rich Low_complexity Low_complexity 1 39 0 237 239 0 0 chr2 153342795 153342841 -99913742 + (TG)n Simple_repeat Simple_repeat 2 47 0 328 299 80 72 chr2 153342963 153343233 -99913350 - L1M4 LINE L1 -1195 4951 4684 2118 137 0 13 chr2 153343233 153343548 -99913035 - AluSx SINE Alu -1 311 1 328 299 80 72 chr2 153343548 153343744 -99912839 - L1M4 LINE L1 -1462 4684 4478 2443 117 11 3 chr2 153343744 153344103 -99912480 - THE1B LTR MaLR -2 362 1 328 299 80 72 chr2 153344103 153344176 -99912407 - L1M4 LINE L1 -1668 4478 4407 237 275 24 121 chr2 153344343 153344550 -99912033 + LTR67 LTR ERVL 3 189 -368 339 264 57 0 chr2 153344785 153344891 -99911692 + LTR67 LTR ERVL 446 557 0 22 0 0 0 chr2 153345848 153345870 -99910713 + AT_rich Low_complexity Low_complexity 1 22 0 281 274 0 0 chr2 153345872 153345934 -99910649 + L2 LINE L2 3246 3307 -6 27 0 0 0 chr2 153346301 153346328 -99910255 + AT_rich Low_complexity Low_complexity 1 27 0 41668 41 5 0 chr2 153347050 153353161 -99903422 + L1PA4 LINE L1 1 6144 -11 192 333 43 77 chr2 153355150 153355267 -99901316 + L2 LINE L2 3185 3297 -16 723 280 60 32 chr2 153356878 153357160 -99899423 - L2 LINE L2 -3 3310 3021 1866 114 53 0 chr2 153357708 153357972 -99898611 + AluSg SINE Alu 27 304 -6 186 118 0 0 chr2 153358109 153358143 -99898440 + (CA)n Simple_repeat Simple_repeat 1 34 0 369 193 125 0 chr2 153359495 153359583 -99897000 - MIR SINE MIR -4 258 160 302 232 24 12 chr2 153359856 153359938 -99896645 - MIR SINE MIR -178 84 2 193 310 99 0 chr2 153360363 153360434 -99896149 + L2 LINE L2 2682 2759 -555 391 242 23 144 chr2 153360512 153360727 -99895856 + MIR SINE MIR 14 193 -69 249 108 0 0 chr2 153360727 153360764 -99895819 + (TG)n Simple_repeat Simple_repeat 1 37 0 391 242 23 144 chr2 153360764 153360812 -99895771 + MIR SINE MIR 193 245 -17 274 304 11 11 chr2 153360886 153360978 -99895605 + MIR SINE MIR 96 187 -75 183 289 82 72 chr2 153361055 153361152 -99895431 + L2 LINE L2 3155 3252 -20 325 234 22 46 chr2 153361291 153361402 -99895181 - MLT1J2 LTR MaLR -2 448 294 235 318 30 0 chr2 153361652 153361718 -99894865 - MIR SINE MIR -194 68 1 2430 73 0 7 chr2 153364280 153364582 -99892001 + AluSq SINE Alu 1 300 -13 837 264 58 74 chr2 153365246 153365678 -99890905 - MLT1J1 LTR MaLR -18 428 4 835 190 58 39 chr2 153368926 153369131 -99887452 + MER2 DNA MER2_type 1 209 -136 23 68 0 0 chr2 153369132 153369176 -99887407 + AT_rich Low_complexity Low_complexity 1 44 0 315 0 0 0 chr2 153369221 153369256 -99887327 + (TG)n Simple_repeat Simple_repeat 2 36 0 22 56 0 0 chr2 153369278 153369314 -99887269 + AT_rich Low_complexity Low_complexity 1 36 0 750 246 16 62 chr2 153371299 153371525 -99885058 - MIR SINE MIR -10 252 38 2276 114 0 0 chr2 153371525 153371823 -99884760 - AluSx SINE Alu -10 302 5 750 246 16 62 chr2 153371823 153371852 -99884731 - MIR SINE MIR -224 38 9 1783 141 76 25 chr2 153372000 153372354 -99884229 + THE1C LTR MaLR 1 372 -3 356 249 102 100 chr2 153372859 153373369 -99883214 - MLT1J LTR MaLR 0 511 1 327 49 0 0 chr2 153374068 153374109 -99882474 + (CA)n Simple_repeat Simple_repeat 2 42 0 234 231 31 0 chr2 153374123 153374188 -99882395 - L1MB8 LINE L1 0 6178 6112 2308 97 0 0 chr2 153374663 153374961 -99881622 + AluSx SINE Alu 1 298 -14 555 258 60 0 chr2 153375523 153375690 -99880893 - MIR SINE MIR 0 262 86 23 33 0 0 chr2 153375716 153375746 -99880837 + AT_rich Low_complexity Low_complexity 1 30 0 1229 171 25 42 chr2 153375763 153376002 -99880581 + AluJo SINE Alu 29 263 -49 183 42 0 0 chr2 153376002 153376026 -99880557 + (TAAAAA)n Simple_repeat Simple_repeat 4 27 0 512 326 80 21 chr2 153378352 153378726 -99877857 - MLT1K LTR MaLR -13 575 180 542 240 110 0 chr2 153379314 153379468 -99877115 - MIR SINE MIR -8 254 84 377 295 29 9 chr2 153380460 153380565 -99876018 - MIR SINE MIR -116 146 40 813 292 169 33 chr2 153380669 153381213 -99875370 - MLT2F LTR ERVL -1 662 45 2415 89 0 19 chr2 153381491 153381806 -99874777 - AluSg SINE Alu -1 309 1 504 271 18 84 chr2 153381860 153382144 -99874439 - MLT1K LTR MaLR -13 575 311 338 346 111 42 chr2 153383117 153383406 -99873177 - L2 LINE L2 -22 3250 2942 183 407 21 14 chr2 153383708 153383853 -99872730 - L2 LINE L2 -809 2505 2360 252 0 0 0 chr2 153386090 153386118 -99870465 + (TG)n Simple_repeat Simple_repeat 2 29 0 382 248 9 9 chr2 153386337 153386442 -99870141 - MLT1K LTR MaLR 0 588 484 1376 216 98 23 chr2 153387065 153387495 -99869088 - MLT1C LTR MaLR 0 467 6 751 100 0 0 chr2 153388103 153388203 -99868380 + AluS SINE Alu 1 100 -213 1413 244 143 88 chr2 153388603 153389528 -99867055 + L2 LINE L2 2087 3228 -85 1781 159 10 32 chr2 153389528 153389856 -99866727 - AluJb SINE Alu 0 312 1 1413 244 143 88 chr2 153389856 153389946 -99866637 + L2 LINE L2 3228 3312 -1 22 0 0 0 chr2 153389948 153389970 -99866613 + AT_rich Low_complexity Low_complexity 1 22 0 251 299 171 33 chr2 153390028 153390239 -99866344 - MIR SINE MIR -6 256 17 2180 127 3 0 chr2 153390300 153390608 -99865975 + AluSx SINE Alu 1 309 -3 728 99 9 0 chr2 153391196 153391307 -99865276 + (GGGA)n Simple_repeat Simple_repeat 4 115 0 23 0 0 0 chr2 153392093 153392116 -99864467 + AT_rich Low_complexity Low_complexity 1 23 0 2410 75 0 31 chr2 153393019 153393337 -99863246 - AluY SINE Alu -3 308 1 1000 101 0 14 chr2 153393338 153393477 -99863106 - AluSq/x SINE Alu -175 137 1 335 260 24 12 chr2 153393628 153393795 -99862788 + L1MC4 LINE L1 2007 6983 -1339 344 267 249 6 chr2 153394039 153394204 -99862379 + L1MC4a LINE L1 4209 4413 -1733 304 300 69 43 chr2 153394224 153394571 -99862012 + L1MC4a LINE L1 4475 4830 -1316 1030 270 85 69 chr2 153395105 153395858 -99860725 + L1MC4a LINE L1 5254 6018 -1790 350 58 420 0 chr2 153396266 153396335 -99860248 - AluSc SINE Alu -2 297 200 588 101 0 0 chr2 153396335 153396414 -99860169 - AluSc SINE Alu -228 81 3 2217 99 0 0 chr2 153396472 153396790 -99859793 - AluSx SINE Alu 0 318 1 2067 120 41 0 chr2 153397800 153398091 -99858492 + AluSg SINE Alu 1 303 -7 2410 59 0 3 chr2 153398167 153398453 -99858130 + AluY SINE Alu 24 308 -3 218 333 36 67 chr2 153399717 153399912 -99856671 + L3 LINE CR1 633 821 -756 1546 185 10 36 chr2 153400372 153400674 -99855909 + AluJo SINE Alu 5 298 -14 1027 242 103 3 chr2 153401278 153401629 -99854954 - L1ME3A LINE L1 -8 6660 6273 5441 220 52 36 chr2 153401643 153403313 -99853270 + L1MB7 LINE L1 16 1711 -4831 6106 233 103 36 chr2 153403415 153405970 -99850613 + L1MB7 LINE L1 2297 4679 -1965 2355 95 0 0 chr2 153405970 153406265 -99850318 + AluSx SINE Alu 1 295 -17 6106 233 103 36 chr2 153406265 153406376 -99850207 + L1MB7 LINE L1 4679 4781 -1863 1906 130 19 0 chr2 153406376 153406646 -99849937 + AluSx SINE Alu 1 275 -37 189 74 0 0 chr2 153406650 153406677 -99849906 + (CAA)n Simple_repeat Simple_repeat 1 27 0 6106 233 103 36 chr2 153406677 153406959 -99849624 + L1MB7 LINE L1 4783 5467 -1177 5047 107 18 71 chr2 153406978 153408401 -99848182 + pTR5 LTR ERV1 781 2295 -143 4352 171 26 22 chr2 153408413 153408545 -99848038 + L1MB7 LINE L1 5467 5597 -1085 1836 125 27 27 chr2 153408545 153408841 -99847742 + AluSx SINE Alu 1 296 -16 4352 171 26 22 chr2 153408841 153408948 -99847635 + L1MB7 LINE L1 5597 5702 -980 2326 63 21 0 chr2 153408948 153409234 -99847349 - AluY SINE Alu -19 292 1 4352 171 26 22 chr2 153409234 153410130 -99846453 + L1MB7 LINE L1 5702 6672 -10 1008 271 64 30 chr2 153410170 153410610 -99845973 - L1ME3A LINE L1 -389 6271 5817 3242 260 78 63 chr2 153410652 153412329 -99844254 - L1ME3A LINE L1 -962 5682 3956 258 32 0 0 chr2 153412329 153412360 -99844223 + (TG)n Simple_repeat Simple_repeat 1 31 0 3242 260 78 63 chr2 153412360 153413178 -99843405 - L1ME3A LINE L1 -2688 3956 3151 957 280 100 39 chr2 153413181 153413850 -99842733 - L1MEc LINE L1 -3573 3071 2444 1063 191 108 102 chr2 153413850 153414222 -99842361 + MLT1A2 LTR MaLR 1 374 0 957 280 100 39 chr2 153414222 153415126 -99841457 - L1MEc LINE L1 -4200 2444 1296 382 322 49 71 chr2 153415521 153415807 -99840776 - L1MEc LINE L1 -5645 989 591 236 313 67 8 chr2 153415807 153415941 -99840642 - L1MEc LINE L1 -5925 709 568 206 19 58 77 chr2 153416436 153416488 -99840095 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 300 303 90 16 chr2 153416636 153416758 -99839825 + MIR SINE MIR 36 113 -95 216 143 0 0 chr2 153416988 153417030 -99839553 + (A)n Simple_repeat Simple_repeat 1 42 0 2566 315 129 54 chr2 153417220 153417484 -99839099 + L2 LINE L2 680 923 -2390 1842 171 50 0 chr2 153417484 153417805 -99838778 - MER1B DNA MER1_type 0 337 1 2566 315 129 54 chr2 153417805 153418632 -99837951 + L2 LINE L2 923 1686 -1627 2167 131 0 0 chr2 153418632 153418938 -99837645 - AluSx SINE Alu -6 306 1 2566 315 129 54 chr2 153418938 153420291 -99836292 + L2 LINE L2 1686 3313 0 615 246 125 28 chr2 153420492 153420557 -99836026 - MER5C DNA MER1_type -50 274 217 1801 167 3 26 chr2 153420557 153420869 -99835714 + AluJb SINE Alu 1 305 -7 615 246 125 28 chr2 153420869 153421051 -99835532 - MER5C DNA MER1_type -107 217 3 238 364 130 20 chr2 153423304 153423557 -99833026 + L3 LINE CR1 756 1036 -541 317 287 74 19 chr2 153423557 153423665 -99832918 - L2 LINE L2 -2 3311 3198 242 263 17 34 chr2 153424575 153424693 -99831890 + C-rich Low_complexity Low_complexity 6 121 0 318 50 0 0 chr2 153424703 153424743 -99831840 + (CCG)n Simple_repeat Simple_repeat 1 40 0 263 128 39 13 chr2 153424884 153424962 -99831621 + (CCG)n Simple_repeat Simple_repeat 3 82 0 207 204 0 0 chr2 153425246 153425290 -99831293 + T-rich Low_complexity Low_complexity 1 44 0 234 0 0 0 chr2 153425303 153425329 -99831254 + (T)n Simple_repeat Simple_repeat 1 26 0 234 0 0 0 chr2 153426647 153426673 -99829910 + (T)n Simple_repeat Simple_repeat 1 26 0 21 0 0 0 chr2 153426991 153427012 -99829571 + GC_rich Low_complexity Low_complexity 1 21 0 204 67 0 0 chr2 153428029 153428059 -99828524 + (TG)n Simple_repeat Simple_repeat 2 31 0 942 152 54 16 chr2 153430019 153430203 -99826380 + MER20 DNA MER1_type 29 219 0 1616 122 19 0 chr2 153430208 153430471 -99826112 + L1PA14 LINE L1 5894 6161 0 22 35 0 0 chr2 153430728 153430757 -99825826 + AT_rich Low_complexity Low_complexity 1 29 0 205 231 0 64 chr2 153431772 153431850 -99824733 + CT-rich Low_complexity Low_complexity 3 75 0 531 348 22 26 chr2 153432644 153432917 -99823666 + L2 LINE L2 2569 2840 -474 739 210 68 23 chr2 153432921 153433097 -99823486 + MIR SINE MIR 12 195 -67 398 336 95 76 chr2 153433098 153433521 -99823062 + L2 LINE L2 2841 3271 -1 360 259 0 52 chr2 153433524 153433640 -99822943 + MIR3 SINE MIR 98 207 -1 33 43 0 0 chr2 153433720 153433767 -99822816 + AT_rich Low_complexity Low_complexity 1 47 0 387 257 58 104 chr2 153433802 153434043 -99822540 + MER112 DNA MER1_type 4 233 -27 22 35 0 0 chr2 153435415 153435444 -99821139 + AT_rich Low_complexity Low_complexity 1 29 0 199 350 106 8 chr2 153436163 153436286 -99820297 + MIR3 SINE MIR 30 164 -44 * 430 283 134 21 chr2 153436282 153436469 -99820114 - L2 LINE L2 0 3313 3106 346 273 55 55 chr2 153436478 153436531 -99820052 + L2 LINE L2 3116 3168 -145 2091 112 7 0 chr2 153436531 153436825 -99819758 - AluSx SINE Alu -16 296 1 346 273 55 55 chr2 153436825 153436954 -99819629 + L2 LINE L2 3167 3298 -15 371 308 88 9 chr2 153436983 153437210 -99819373 - L2 LINE L2 -471 2843 2599 199 143 0 24 chr2 153437213 153437255 -99819328 + MIR3 SINE MIR 163 203 -5 210 37 0 0 chr2 153439178 153439205 -99817378 + (A)n Simple_repeat Simple_repeat 1 27 0 2098 76 73 3 chr2 153439484 153439801 -99816782 - L1PA13 LINE L1 -16 6147 5809 196 295 116 18 chr2 153440072 153440184 -99816399 + L2 LINE L2 2782 2904 -410 263 178 22 0 chr2 153440263 153440308 -99816275 + L2 LINE L2 3265 3310 -3 1385 164 137 7 chr2 153440334 153440633 -99815950 - MER58B DNA MER1_type -2 339 2 681 212 138 14 chr2 153441070 153441287 -99815296 - MER112 DNA MER1_type -12 248 5 201 228 193 0 chr2 153441425 153441482 -99815101 - MIR SINE MIR -85 177 110 485 261 0 51 chr2 153442659 153442797 -99813786 + MIR SINE MIR 126 256 -6 1321 139 4 68 chr2 153443144 153443396 -99813187 + MER46A DNA MER2_type 1 236 0 236 297 135 0 chr2 153443632 153443706 -99812877 - MIR SINE MIR -82 126 43 2254 95 0 3 chr2 153444106 153444402 -99812181 + AluSx SINE Alu 1 295 -17 407 221 178 49 chr2 153444579 153444742 -99811841 - MIR SINE MIR -15 247 64 1743 131 153 87 chr2 153445016 153445420 -99811163 - Tigger2a DNA MER2_type -3 431 1 1962 118 3 10 chr2 153445879 153446175 -99810408 - AluSg SINE Alu -16 294 1 268 266 242 32 chr2 153446753 153446877 -99809706 + L2 LINE L2 3164 3313 0 202 375 60 25 chr2 153447151 153447351 -99809232 + L2 LINE L2 2080 2286 -1028 * 371 311 93 50 chr2 153447338 153447618 -99808965 - L2 LINE L2 -14 3258 2967 552 250 173 0 chr2 153447956 153448112 -99808471 - MER5A DNA MER1_type 0 189 7 665 322 160 21 chr2 153448384 153448952 -99807631 - L2 LINE L2 -935 2379 1733 209 404 43 29 chr2 153449824 153450083 -99806500 - L2 LINE L2 -235 3037 2778 1596 173 7 11 chr2 153450267 153450578 -99806005 - AluJb SINE Alu 0 310 1 252 295 32 42 chr2 153454396 153454491 -99802092 - L3 LINE CR1 -1337 240 147 1115 203 91 4 chr2 153454893 153455183 -99801400 - MER33 DNA MER1_type -22 302 1 440 234 193 20 chr2 153455807 153456004 -99800579 + MIR SINE MIR 1 231 -31 428 285 62 45 chr2 153456156 153456335 -99800248 + MER5A DNA MER1_type 7 188 -1 183 233 81 105 chr2 153457149 153457235 -99799348 - MER5A DNA MER1_type -43 146 63 588 161 0 0 chr2 153459067 153459160 -99797423 + U6 snRNA snRNA 1 93 -14 1727 174 7 3 chr2 153460272 153460565 -99796018 + AluJb SINE Alu 1 294 -18 824 179 241 52 chr2 153460818 153461125 -99795458 - MLT1A1 LTR MaLR 0 365 1 547 314 33 16 chr2 153461277 153461519 -99795064 - L2 LINE L2 -483 2831 2586 631 193 59 0 chr2 153461863 153461982 -99794601 - FLAM_C SINE Alu -17 126 1 21 57 0 0 chr2 153462022 153462057 -99794526 + AT_rich Low_complexity Low_complexity 1 35 0 510 17 0 0 chr2 153463248 153463307 -99793276 + (TG)n Simple_repeat Simple_repeat 1 59 0 2070 130 0 10 chr2 153463915 153464223 -99792360 + AluSx SINE Alu 2 306 -6 2279 119 0 0 chr2 153464823 153465135 -99791448 - AluSp SINE Alu 0 313 2 1881 159 3 3 chr2 153468575 153468871 -99787712 + AluJo SINE Alu 1 296 -16 379 357 32 0 chr2 153468996 153469122 -99787461 - L2 LINE L2 0 3272 3143 741 93 87 47 chr2 153469248 153469398 -99787185 - L1MA8 LINE L1 -4 6287 6132 3979 234 61 40 chr2 153469682 153471019 -99785564 - L1M4 LINE L1 -1213 4933 3570 2288 78 0 10 chr2 153471108 153471404 -99785179 + AluY SINE Alu 1 293 -18 303 269 54 0 chr2 153471619 153471741 -99784842 - MIR SINE MIR -27 181 51 252 0 0 0 chr2 153471987 153472015 -99784568 + (TG)n Simple_repeat Simple_repeat 2 29 0 212 122 24 0 chr2 153472050 153472091 -99784492 + (TATATG)n Simple_repeat Simple_repeat 4 45 0 23 54 0 0 chr2 153472425 153472462 -99784121 + AT_rich Low_complexity Low_complexity 1 37 0 332 291 0 23 chr2 153472778 153472864 -99783719 - MER117 DNA MER1_type -107 90 7 413 183 176 61 chr2 153473083 153473214 -99783369 + MER58B DNA MER1_type 2 147 -194 1291 167 30 4 chr2 153473216 153473449 -99783134 + MER58B DNA MER1_type 103 341 0 2158 102 0 0 chr2 153473600 153473915 -99782668 - AluSg SINE Alu 0 315 1 1580 189 119 11 chr2 153474081 153474526 -99782057 - Charlie1 DNA MER1_type -5 2756 2264 2987 226 55 33 chr2 153474531 153475965 -99780618 - L1ME1 LINE L1 0 6166 4699 2112 191 29 44 chr2 153475965 153476489 -99780094 - Charlie1 DNA MER1_type -431 2330 1815 4889 129 11 0 chr2 153476539 153477265 -99779318 + Tigger2 DNA MER2_type 1 734 -1984 1311 169 36 0 chr2 153477330 153477579 -99779004 + Tigger2 DNA MER2_type 2461 2718 0 573 191 46 15 chr2 153477582 153477713 -99778870 - Charlie1 DNA MER1_type -1057 1704 1570 2177 103 7 0 chr2 153478661 153478951 -99777632 - AluSp SINE Alu -19 294 3 27 73 0 0 chr2 153480044 153480099 -99776484 + AT_rich Low_complexity Low_complexity 1 55 0 203 291 0 0 chr2 153480638 153480693 -99775890 + (TA)n Simple_repeat Simple_repeat 1 55 0 23 0 0 0 chr2 153480799 153480822 -99775761 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr2 153481058 153481087 -99775496 + AT_rich Low_complexity Low_complexity 1 29 0 189 135 0 96 chr2 153483619 153483671 -99772912 - MIR SINE MIR -1 261 215 290 309 137 29 chr2 153483737 153483876 -99772707 - MER5A DNA MER1_type 0 189 36 * 308 306 112 22 chr2 153483765 153483899 -99772684 + MER5A DNA MER1_type 43 188 -1 242 363 178 14 chr2 153485025 153485306 -99771277 + L2 LINE L2 2551 2877 -437 452 252 32 0 chr2 153485307 153485430 -99771153 + MER105 DNA DNA 76 202 -2 202 321 202 0 chr2 153485440 153485549 -99771034 + L2 LINE L2 3175 3305 -8 222 91 0 0 chr2 153487202 153487235 -99769348 + (TG)n Simple_repeat Simple_repeat 2 34 0 499 237 66 79 chr2 153488352 153488468 -99768115 - MIR SINE MIR -2 260 147 5510 79 1 3 chr2 153488468 153489216 -99767367 - L1PA8 LINE L1 0 6172 5426 499 237 66 79 chr2 153489216 153489327 -99767256 - MIR SINE MIR -115 147 36 2249 105 0 40 chr2 153489389 153489714 -99766869 + AluSx SINE Alu 1 312 0 257 325 250 0 chr2 153490587 153490787 -99765796 + L2 LINE L2 2236 2485 -829 219 188 38 88 chr2 153490944 153491024 -99765559 + L2 LINE L2 3225 3300 -13 231 36 0 0 chr2 153491024 153491052 -99765531 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 1674 196 3 13 chr2 153491274 153491586 -99764997 - AluJb SINE Alu -3 309 1 26 64 0 0 chr2 153494740 153494787 -99761796 + AT_rich Low_complexity Low_complexity 1 47 0 261 0 0 0 chr2 153495468 153495497 -99761086 + (A)n Simple_repeat Simple_repeat 1 29 0 435 254 160 41 chr2 153498132 153498301 -99758282 - MIR SINE MIR -72 190 2 183 80 0 0 chr2 153498820 153498845 -99757738 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 185 300 60 0 chr2 153499453 153499503 -99757080 + MIR SINE MIR 37 89 -119 237 297 237 20 chr2 153502240 153502489 -99754094 - L3b LINE CR1 -166 1417 1115 2137 129 0 3 chr2 153502669 153502980 -99753603 - AluSx SINE Alu -2 310 1 22 35 0 0 chr2 153504764 153504793 -99751790 + AT_rich Low_complexity Low_complexity 1 29 0 449 279 132 25 chr2 153504937 153505134 -99751449 - MIR SINE MIR -13 249 32 211 282 198 57 chr2 153505585 153505918 -99750665 + L3 LINE CR1 1026 1405 -172 477 237 160 51 chr2 153506371 153506527 -99750056 - MER5A DNA MER1_type -1 188 16 307 310 168 0 chr2 153506535 153506648 -99749935 + L3 LINE CR1 1409 1540 -37 429 271 214 24 chr2 153506787 153506997 -99749586 + MIR SINE MIR 13 262 0 192 40 0 0 chr2 153511993 153512018 -99744565 + (T)n Simple_repeat Simple_repeat 1 25 0 6089 17 0 0 chr2 153512502 153513202 -99743381 - L1PA2 LINE L1 -1 6154 5455 8005 26 4 0 chr2 153513202 153514156 -99742427 + L1P LINE L1 3740 4697 -1449 1549 162 72 36 chr2 153516148 153516482 -99740101 - MER7A DNA MER2_type -1 345 2 286 314 12 12 chr2 153516515 153516601 -99739982 - MER5A DNA MER1_type -96 93 8 2249 86 13 13 chr2 153518384 153518686 -99737897 + AluSg SINE Alu 1 302 -8 1109 191 123 9 chr2 153518997 153519337 -99737246 + Charlie5 DNA MER1_type 2243 2621 0 261 319 139 18 chr2 153520183 153520349 -99736234 + MIR SINE MIR 76 261 -1 530 176 56 24 chr2 153521542 153521667 -99734916 + MER53 DNA DNA 1 129 -60 29 0 0 0 chr2 153521803 153521832 -99734751 + AT_rich Low_complexity Low_complexity 1 29 0 784 170 0 0 chr2 153521839 153521980 -99734603 - L1PB1 LINE L1 -8 6143 6003 1464 132 0 151 chr2 153521980 153522478 -99734105 + L1PA15 LINE L1 5570 5961 -204 402 88 176 0 chr2 153522629 153522697 -99733886 - MADE1 DNA Mariner 0 80 1 314 243 87 60 chr2 153522782 153522967 -99733616 - L1ME3 LINE L1 -299 5863 5674 192 152 0 0 chr2 153523419 153523452 -99733131 + (CATA)n Simple_repeat Simple_repeat 2 34 0 499 303 128 23 chr2 153523628 153523846 -99732737 + MIR SINE MIR 21 261 -1 2133 234 40 52 chr2 153524048 153524876 -99731707 + L1MB8 LINE L1 3786 4603 -1543 686 183 15 0 chr2 153524914 153525045 -99731538 + FLAM_C SINE Alu 1 133 -10 199 346 116 16 chr2 153525901 153526219 -99730364 - L2 LINE L2 -1153 2161 1812 37 76 0 0 chr2 153529334 153529413 -99727170 + AT_rich Low_complexity Low_complexity 1 79 0 291 76 51 25 chr2 153530646 153530725 -99725858 + (TA)n Simple_repeat Simple_repeat 2 82 0 1976 195 112 16 chr2 153530731 153531233 -99725350 + L1MB8 LINE L1 5628 6177 -1 565 219 95 57 chr2 153531231 153531514 -99725069 + L1MC5 LINE L1 7618 7911 -50 * 2341 100 0 0 chr2 153532130 153532440 -99724143 + AluSg SINE Alu 1 310 0 1513 173 180 20 chr2 153532973 153533367 -99723216 + MSTB2 LTR MaLR 1 457 0 25 31 0 0 chr2 153533970 153534002 -99722581 + AT_rich Low_complexity Low_complexity 1 32 0 2355 82 3 0 chr2 153534390 153534683 -99721900 + AluSp SINE Alu 1 294 -19 1663 118 118 26 chr2 153534693 153534964 -99721619 + AluSq SINE Alu 1 296 -17 24 77 0 0 chr2 153535038 153535090 -99721493 + AT_rich Low_complexity Low_complexity 1 52 0 33 25 0 0 chr2 153535685 153535725 -99720858 + AT_rich Low_complexity Low_complexity 1 40 0 2045 151 32 3 chr2 153535927 153536265 -99720318 - MER7A DNA MER2_type 0 346 1 256 261 254 0 chr2 153536408 153536573 -99720010 + L1ME4a LINE L1 5455 5661 -460 244 221 98 68 chr2 153536781 153536944 -99719639 + L1ME4a LINE L1 5954 6121 0 215 212 0 45 chr2 153538071 153538137 -99718446 + (TATATG)n Simple_repeat Simple_repeat 2 64 0 297 317 99 35 chr2 153538142 153538284 -99718299 + MIR3 SINE MIR 18 168 -40 22 0 0 0 chr2 153538723 153538745 -99717838 + AT_rich Low_complexity Low_complexity 1 22 0 331 209 11 51 chr2 153538748 153538925 -99717658 + (TATAA)n Simple_repeat Simple_repeat 3 172 0 239 386 32 32 chr2 153539315 153539566 -99717017 - MIR SINE MIR -3 259 9 21 36 0 0 chr2 153540271 153540299 -99716284 + AT_rich Low_complexity Low_complexity 1 28 0 27 0 0 0 chr2 153541631 153541658 -99714925 + AT_rich Low_complexity Low_complexity 1 27 0 615 212 27 14 chr2 153542398 153542544 -99714039 + FRAM SINE Alu 11 158 -18 21 0 0 0 chr2 153542584 153542605 -99713978 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 153542768 153542796 -99713787 + AT_rich Low_complexity Low_complexity 1 28 0 1938 151 16 0 chr2 153542803 153543108 -99713475 + AluSx SINE Alu 1 310 -2 8954 153 19 188 chr2 153543583 153546375 -99710208 + L1MA5A LINE L1 14 2333 -4456 32 57 0 0 chr2 153546405 153546458 -99710125 + AT_rich Low_complexity Low_complexity 1 53 0 12415 182 63 31 chr2 153546506 153547569 -99709014 + L1MA5A LINE L1 2418 3445 -3494 750 161 0 0 chr2 153547569 153547687 -99708896 + FLAM_C SINE Alu 1 118 -15 12415 182 63 31 chr2 153547687 153551080 -99705503 + L1MA5A LINE L1 3445 6939 0 2716 242 62 25 chr2 153551501 153552498 -99704085 + L1MC/D LINE L1 4133 5166 -980 1605 174 14 21 chr2 153552498 153552779 -99703804 + AluJo SINE Alu 1 279 -33 186 43 0 0 chr2 153552873 153552896 -99703687 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 912 161 102 4 chr2 153552966 153553233 -99703350 + L1MC/D LINE L1 5178 5474 -743 29 28 0 0 chr2 153553243 153553279 -99703304 + AT_rich Low_complexity Low_complexity 1 36 0 218 259 214 9 chr2 153553955 153554067 -99702516 + MIR SINE MIR 122 256 -6 26 64 0 0 chr2 153554293 153554340 -99702243 + AT_rich Low_complexity Low_complexity 1 47 0 25 65 0 0 chr2 153555187 153555233 -99701350 + AT_rich Low_complexity Low_complexity 1 46 0 2105 128 0 3 chr2 153555997 153556293 -99700290 + AluSx SINE Alu 1 295 -17 21 0 0 0 chr2 153556451 153556472 -99700111 + AT_rich Low_complexity Low_complexity 1 21 0 282 270 0 70 chr2 153556574 153556689 -99699894 + L1ME3 LINE L1 6055 6161 -1 1079 178 4 48 chr2 153556926 153557195 -99699388 + L1M4 LINE L1 3941 4197 -1949 602 215 25 57 chr2 153557800 153557958 -99698625 + Tigger1 DNA MER2_type 5 157 -2261 * 1140 151 48 15 chr2 153557947 153558153 -99698430 + Tigger1 DNA MER2_type 2202 2414 -4 26 50 0 0 chr2 153558518 153558558 -99698025 + AT_rich Low_complexity Low_complexity 1 40 0 694 286 42 0 chr2 153558675 153558867 -99697716 - MIR SINE MIR -18 244 45 420 228 22 22 chr2 153558900 153558992 -99697591 + MLT1D LTR MaLR 336 427 -78 771 318 16 4 chr2 153559056 153559301 -99697282 + L1M3a LINE L1 2 249 -5706 582 300 28 22 chr2 153559415 153559595 -99696988 - L1M3a LINE L1 -5428 527 347 322 285 39 31 chr2 153559762 153559892 -99696691 - L1M3a LINE L1 -5509 446 316 273 328 64 35 chr2 153559903 153560187 -99696396 - L1M3a LINE L1 -5183 772 301 312 362 9 0 chr2 153560222 153560327 -99696256 - L1M3a LINE L1 -5573 382 277 * 7402 169 55 4 chr2 153560319 153561816 -99694767 + L1MA8 LINE L1 3699 5272 -874 24 0 0 0 chr2 153561884 153561908 -99694675 + AT_rich Low_complexity Low_complexity 1 24 0 1218 169 14 0 chr2 153561908 153562115 -99694468 - MER2 DNA MER2_type -135 210 1 201 39 0 0 chr2 153562129 153562155 -99694428 + (CAAAAA)n Simple_repeat Simple_repeat 2 27 0 3115 151 42 36 chr2 153562155 153562796 -99693787 + L1MA8 LINE L1 5281 5925 -366 482 220 0 20 chr2 153562796 153562896 -99693687 - Tigger7 DNA MER2_type 0 2587 2490 1456 217 0 4 chr2 153562898 153563161 -99693422 - Tigger7 DNA MER2_type -469 264 3 790 180 25 0 chr2 153563197 153563358 -99693225 + L1MA8 LINE L1 6127 6291 0 1996 200 75 8 chr2 153564447 153564978 -99691605 + L1MC/D LINE L1 5200 5766 -593 7405 130 47 18 chr2 153564984 153566223 -99690360 + Tigger2 DNA MER2_type 1444 2718 0 2553 59 0 0 chr2 153566836 153567141 -99689442 - AluY SINE Alu -6 305 1 227 214 143 71 chr2 153567468 153567538 -99689045 - MIR SINE MIR -103 105 31 461 251 212 59 chr2 153568098 153568418 -99688165 + HAL1b LINE L1 319 589 -759 324 48 0 0 chr2 153568418 153568460 -99688123 + (CA)n Simple_repeat Simple_repeat 2 43 0 461 251 212 59 chr2 153568460 153568668 -99687915 + HAL1b LINE L1 589 928 -420 613 183 0 0 chr2 153568683 153568787 -99687796 - FLAM_A SINE Alu -16 126 23 237 218 46 35 chr2 153568805 153568892 -99687691 + HAL1b LINE L1 966 1053 -295 225 214 0 0 chr2 153568995 153569037 -99687546 + (TA)n Simple_repeat Simple_repeat 2 43 0 189 0 0 0 chr2 153569037 153569058 -99687525 + (CA)n Simple_repeat Simple_repeat 2 22 0 2422 80 0 0 chr2 153569417 153569718 -99686865 + AluY SINE Alu 1 301 -10 573 275 48 35 chr2 153569745 153569974 -99686609 + Charlie7 DNA MER1_type 99 330 -2282 1942 103 41 17 chr2 153570008 153570298 -99686285 - AluSx SINE Alu -15 297 1 563 244 156 51 chr2 153570356 153570651 -99685932 + Charlie7 DNA MER1_type 1640 1965 -647 1125 108 61 61 chr2 153570675 153571031 -99685552 - LTR23 LTR ERV1 0 437 1 2051 115 3 7 chr2 153571069 153571357 -99685226 + AluSx SINE Alu 1 287 -25 334 206 52 10 chr2 153571438 153571535 -99685048 + Charlie7 DNA MER1_type 2031 2131 -481 221 231 0 33 chr2 153572618 153572696 -99683887 + (CATA)n Simple_repeat Simple_repeat 1 77 -11 2308 75 3 10 chr2 153572696 153572990 -99683593 - AluSg SINE Alu -14 296 5 221 231 0 33 chr2 153572990 153573002 -99683581 + (CATA)n Simple_repeat Simple_repeat 77 88 0 2149 104 3 7 chr2 153573192 153573490 -99683093 + AluSx SINE Alu 1 297 -15 754 213 44 12 chr2 153573906 153574066 -99682517 - FRAM SINE Alu -1 165 1 2965 152 107 28 chr2 153574347 153574952 -99681631 + MER39B LTR ERV1 1 653 0 2438 219 54 26 chr2 153575579 153576381 -99680202 + L1MC2 LINE L1 4214 5037 -1109 2287 94 0 16 chr2 153576388 153576565 -99680018 + AluSx SINE Alu 1 172 -140 5286 61 8 158 chr2 153576565 153577536 -99679047 + LTR12 LTR ERV1 1 826 0 2287 94 0 16 chr2 153577536 153577666 -99678917 + AluSx SINE Alu 172 303 -9 2121 113 0 3 chr2 153577668 153577974 -99678609 + AluSc SINE Alu 1 305 0 4249 151 86 27 chr2 153577987 153579019 -99677564 + L1MC2 LINE L1 5047 6128 -216 2314 170 29 18 chr2 153579915 153580367 -99676216 + MSTB2 LTR MaLR 1 457 0 604 289 18 57 chr2 153580835 153581063 -99675520 + HAL1 LINE L1 417 635 -1872 685 259 112 0 chr2 153581067 153581264 -99675319 - MER20 DNA MER1_type 0 219 1 1412 259 201 43 chr2 153581265 153582471 -99674112 + HAL1 LINE L1 633 2028 -479 642 180 123 38 chr2 153582489 153582700 -99673883 + HAL1 LINE L1 2169 2397 -110 6134 85 11 5 chr2 153583029 153586391 -99670192 + L1PA7 LINE L1 1762 6142 -12 6134 63 29 1 chr2 153586391 153587191 -99669392 + L1PA7 LINE L1 5329 6153 -1 6134 85 11 5 chr2 153587191 153587204 -99669379 + L1PA7 LINE L1 6142 6153 -1 7093 222 72 20 chr2 153587221 153587347 -99669236 + L1MA4 LINE L1 16 134 -7431 1685 162 14 14 chr2 153587347 153587660 -99668923 + AluJb SINE Alu 6 318 0 7093 222 72 20 chr2 153587660 153589609 -99666974 + L1MA4 LINE L1 134 2916 -4649 506 138 0 0 chr2 153589609 153589689 -99666894 + MADE1 DNA Mariner 1 80 0 7093 222 72 20 chr2 153589689 153589948 -99666635 + L1MA4 LINE L1 2916 3160 -4405 438 195 18 44 chr2 153589971 153590084 -99666499 + LTR10A-int LTR ERV1 6538 6647 -2 1663 222 137 18 chr2 153590085 153590575 -99666008 + LTR10A LTR ERV1 1 548 -61 11654 174 40 49 chr2 153590615 153592487 -99664096 + L1MA4 LINE L1 3209 5096 -2623 1880 118 87 0 chr2 153592487 153592774 -99663809 - AluSx SINE Alu 0 312 1 11654 174 40 49 chr2 153592774 153595334 -99661249 + L1MA4 LINE L1 5096 7679 -40 29 0 0 0 chr2 153595351 153595380 -99661203 + AT_rich Low_complexity Low_complexity 1 29 0 202 151 0 75 chr2 153595692 153595708 -99660875 + A-rich Low_complexity Low_complexity 2 18 -32 635 211 23 0 chr2 153595708 153595836 -99660747 + FLAM_C SINE Alu 1 131 -2 202 151 0 75 chr2 153595836 153595872 -99660711 + A-rich Low_complexity Low_complexity 18 50 0 21 36 0 0 chr2 153596335 153596363 -99660220 + AT_rich Low_complexity Low_complexity 1 28 0 1102 203 5 5 chr2 153596369 153596571 -99660012 - MER2 DNA MER2_type -142 203 2 471 289 154 47 chr2 153596769 153596890 -99659693 + L1M4c LINE L1 1371 1478 -4906 8979 94 16 19 chr2 153596890 153596953 -99659630 + HSMAR1 DNA Mariner 1 63 -1224 2498 69 0 0 chr2 153596953 153597259 -99659324 - AluY SINE Alu -5 306 1 8979 94 16 19 chr2 153597259 153598485 -99658098 + HSMAR1 DNA Mariner 63 1287 0 471 289 154 47 chr2 153598485 153598771 -99657812 + L1M4c LINE L1 1478 1822 -4562 524 166 209 164 chr2 153598785 153599036 -99657547 - Charlie5 DNA MER1_type -1 2623 2348 2024 132 0 0 chr2 153599036 153599317 -99657266 + AluSx SINE Alu 2 282 -30 524 166 209 164 chr2 153599317 153599438 -99657145 - Charlie5 DNA MER1_type -276 2348 2234 714 159 0 16 chr2 153599441 153599567 -99657016 - MER3 DNA MER1_type -47 162 39 687 272 110 75 chr2 153599735 153600378 -99656205 + L1ME3A LINE L1 5290 5955 -215 2202 92 7 7 chr2 153600953 153601259 -99655324 + AluSx SINE Alu 1 306 -6 573 55 0 0 chr2 153603097 153603170 -99653413 + (CTG)n Simple_repeat Simple_repeat 2 74 0 225 65 0 0 chr2 153603223 153603254 -99653329 + (TCC)n Simple_repeat Simple_repeat 1 31 0 229 178 14 41 chr2 153603425 153603498 -99653085 + (GGGTG)n Simple_repeat Simple_repeat 1 71 0 331 317 120 24 chr2 153605574 153605741 -99650842 - MIR3 SINE MIR -25 183 1 193 350 88 12 chr2 153606067 153606147 -99650436 + L2 LINE L2 3155 3240 -32 312 286 0 0 chr2 153606770 153606840 -99649743 - L2 LINE L2 -8 3264 3195 24 53 0 0 chr2 153606993 153607031 -99649552 + AT_rich Low_complexity Low_complexity 1 38 0 680 153 105 0 chr2 153608157 153608281 -99648302 + FRAM SINE Alu 23 159 -17 1178 201 42 38 chr2 153608284 153608600 -99647983 + AluJo SINE Alu 1 302 0 23 33 0 0 chr2 153608707 153608737 -99647846 + AT_rich Low_complexity Low_complexity 1 30 0 1349 158 13 8 chr2 153609141 153609375 -99647208 + MER46A DNA MER2_type 1 235 -1 22 0 0 0 chr2 153610034 153610056 -99646527 + AT_rich Low_complexity Low_complexity 1 22 0 1939 137 10 20 chr2 153611635 153611935 -99644648 + AluSx SINE Alu 1 297 -15 413 315 80 88 chr2 153613851 153614288 -99642295 - L2 LINE L2 -50 3222 2791 1326 158 0 0 chr2 153615643 153615852 -99640731 + AluJb SINE Alu 86 294 -18 294 299 46 0 chr2 153616190 153616277 -99640306 - MIR SINE MIR 0 262 172 224 303 83 41 chr2 153616566 153616711 -99639872 + MIR SINE MIR 41 191 -71 21 57 0 0 chr2 153617002 153617037 -99639546 + AT_rich Low_complexity Low_complexity 1 35 0 656 226 101 52 chr2 153617327 153617575 -99639008 + MIR SINE MIR 2 261 -1 188 273 352 0 chr2 153619420 153619508 -99637075 - L2 LINE L2 -2 3311 3193 248 302 132 9 chr2 153619660 153619766 -99636817 - MIR SINE MIR -58 150 32 195 129 0 0 chr2 153620166 153620197 -99636386 + (A)n Simple_repeat Simple_repeat 1 31 0 690 158 47 142 chr2 153621630 153621681 -99634902 + AluJb SINE Alu 86 140 -172 1125 108 0 0 chr2 153621681 153621839 -99634744 + L1PA15 LINE L1 6000 6157 -8 690 158 47 142 chr2 153621839 153621977 -99634606 + AluJb SINE Alu 140 257 -55 335 218 300 18 chr2 153622428 153622538 -99634045 + MER5B DNA MER1_type 7 147 -31 845 182 55 0 chr2 153622604 153622769 -99633814 - AluJb SINE Alu -8 304 131 452 265 0 116 chr2 153624698 153624789 -99631794 + MER5A DNA MER1_type 23 83 -106 2017 101 11 0 chr2 153624789 153624918 -99631665 + AluY SINE Alu 1 127 -189 222 62 0 0 chr2 153624918 153624950 -99631633 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 2017 101 11 0 chr2 153624950 153625133 -99631450 + AluY SINE Alu 127 316 0 452 265 0 116 chr2 153625133 153625229 -99631354 + MER5A DNA MER1_type 83 189 0 357 304 95 14 chr2 153626830 153626978 -99629605 - MIR SINE MIR -55 207 48 419 263 145 11 chr2 153627113 153627292 -99629291 - MIR SINE MIR -11 251 49 2404 94 0 0 chr2 153627620 153627927 -99628656 - AluSc SINE Alu -2 307 1 388 327 58 99 chr2 153629175 153629539 -99627044 - L2 LINE L2 -10 3262 2914 292 266 56 56 chr2 153629773 153629916 -99626667 + MIR SINE MIR 110 252 -10 311 332 91 110 chr2 153629960 153630333 -99626250 - L2 LINE L2 -3 3269 2904 183 322 0 0 chr2 153631100 153631159 -99625424 - MIR SINE MIR 0 262 204 3994 219 108 46 chr2 153631187 153633250 -99623333 - L1MB7 LINE L1 -16 6168 4235 396 0 0 0 chr2 153633250 153633294 -99623289 + (TG)n Simple_repeat Simple_repeat 2 45 0 3994 219 108 46 chr2 153633294 153633852 -99622731 - L1MB7 LINE L1 -1949 4235 3713 2150 123 3 0 chr2 153633852 153634154 -99622429 - AluSp SINE Alu -9 304 2 3994 219 108 46 chr2 153634154 153634520 -99622063 - L1MB7 LINE L1 -2471 3713 2675 630 167 0 9 chr2 153634520 153634628 -99621955 + AluSg/x SINE Alu 193 299 -10 931 227 59 7 chr2 153634637 153634910 -99621673 - L1MB7 LINE L1 -3459 2687 2401 810 236 41 52 chr2 153635229 153635500 -99621083 - L1ME3A LINE L1 -205 5965 5698 1953 155 7 3 chr2 153635541 153635851 -99620732 - AluJo SINE Alu 0 312 2 589 223 76 16 chr2 153635933 153636117 -99620466 - MER3 DNA MER1_type -14 195 1 508 306 139 7 chr2 153636125 153636406 -99620177 + MER5C DNA MER1_type 1 318 -6 666 258 52 52 chr2 153636407 153636694 -99619889 - L1ME3A LINE L1 -509 5661 5375 609 280 149 62 chr2 153636707 153637061 -99619522 - L1ME3A LINE L1 -847 5299 4881 2094 98 9 25 chr2 153637061 153637377 -99619206 - AluY SINE Alu 0 311 1 609 280 149 62 chr2 153637377 153637558 -99619025 - L1ME3A LINE L1 -1265 4881 4717 317 262 194 5 chr2 153637579 153637770 -99618813 - L1ME3A LINE L1 -1493 4653 4427 737 281 128 23 chr2 153637778 153638394 -99618189 - L1ME3A LINE L1 -1781 4365 3685 768 305 65 31 chr2 153638414 153639211 -99617372 - L1ME3A LINE L1 -2535 3611 2788 382 315 63 7 chr2 153639879 153640022 -99616561 - MIR SINE MIR -63 199 49 2534 39 3 0 chr2 153641211 153641516 -99615067 + AluY SINE Alu 1 306 -5 1418 189 0 74 chr2 153641652 153641975 -99614608 + AluJb SINE Alu 4 302 -10 533 271 57 68 chr2 153643183 153643464 -99613119 - L1ME LINE L1 -317 5804 5527 801 164 190 41 chr2 153645057 153645252 -99611331 - MER58A DNA MER1_type 0 224 1 2373 41 34 0 chr2 153645767 153646060 -99610523 - AluY SINE Alu -8 303 1 191 167 0 21 chr2 153646423 153646471 -99610112 + CT-rich Low_complexity Low_complexity 2 48 0 1235 179 64 54 chr2 153647678 153647958 -99608625 + AluJb SINE Alu 1 283 -29 1867 150 33 3 chr2 153648123 153648423 -99608160 - AluSx SINE Alu -3 309 1 331 209 15 15 chr2 153648637 153648704 -99607879 + L2 LINE L2 3203 3269 -3 345 257 112 10 chr2 153650882 153651088 -99605495 - L1ME4a LINE L1 -166 5955 5729 267 408 20 7 chr2 153651138 153651290 -99605293 - L3 LINE CR1 -555 1022 869 216 0 0 0 chr2 153651307 153651331 -99605252 + (TTAA)n Simple_repeat Simple_repeat 1 24 0 2921 130 6 19 chr2 153651441 153651958 -99604625 - L1MA4A LINE L1 0 6303 5794 218 311 14 27 chr2 153652223 153652297 -99604286 - L3 LINE CR1 -1072 505 433 2233 110 3 0 chr2 153652496 153652797 -99603786 - AluSq SINE Alu -11 302 1 468 51 0 0 chr2 153652916 153652975 -99603608 + (TG)n Simple_repeat Simple_repeat 2 60 0 559 299 36 6 chr2 153653032 153653199 -99603384 - MIR SINE MIR -32 230 59 424 227 21 2 chr2 153655135 153655244 -99601339 + L1ME LINE L1 5730 5822 -299 848 271 32 16 chr2 153655253 153655500 -99601083 - MIR SINE MIR -7 255 5 2269 96 0 10 chr2 153656134 153656447 -99600136 - AluSg SINE Alu 0 310 1 223 311 88 101 chr2 153656465 153656793 -99599790 - L2 LINE L2 -2800 514 191 683 160 48 116 chr2 153657114 153657382 -99599201 - L1MC5 LINE L1 -215 7746 7497 180 0 0 0 chr2 153657826 153657846 -99598737 + (TTG)n Simple_repeat Simple_repeat 2 21 0 712 267 48 5 chr2 153657956 153658162 -99598421 - MLT1I LTR MaLR 0 409 195 478 328 8 0 chr2 153658389 153658517 -99598066 - L2 LINE L2 0 3272 3144 835 239 38 19 chr2 153658541 153658750 -99597833 + MER58C DNA MER1_type 3 215 0 2096 108 0 0 chr2 153661222 153661554 -99595029 + AluSg SINE Alu 1 332 0 400 281 43 22 chr2 153662862 153663001 -99593582 + L2 LINE L2 3172 3313 0 506 294 24 0 chr2 153664178 153664304 -99592279 - L2 LINE L2 -1 3271 3143 419 251 45 13 chr2 153664620 153664745 -99591838 - MIR SINE MIR -76 132 1 2076 103 0 4 chr2 153665256 153665571 -99591012 - AluSc SINE Alu 0 314 1 2691 0 0 0 chr2 153667088 153667380 -99589203 + AluYa5 SINE Alu 1 292 -19 562 266 37 11 chr2 153667606 153667794 -99588789 + MER46C DNA MER2_type 80 272 -66 198 71 0 0 chr2 153667829 153667857 -99588726 + (TG)n Simple_repeat Simple_repeat 1 28 0 1125 169 5 0 chr2 153668674 153668875 -99587708 + L1PB1 LINE L1 1 202 -6661 * 13879 197 37 8 chr2 153668868 153674463 -99582120 + L1PB1 LINE L1 1113 6867 0 1940 116 32 0 chr2 153674570 153674854 -99581729 - AluSx SINE Alu -19 293 1 273 297 109 0 chr2 153674857 153674995 -99581588 + MARNA DNA Mariner 36 188 -398 * 280 275 114 21 chr2 153674910 153675103 -99581480 - MARNA DNA Mariner -94 492 282 553 317 39 0 chr2 153675548 153675728 -99580855 - MIR SINE MIR -13 249 63 352 329 107 7 chr2 153676019 153676159 -99580424 + L2 LINE L2 2891 3044 -269 298 342 8 33 chr2 153676480 153676600 -99579983 - MIR SINE MIR -126 136 20 21 0 0 0 chr2 153677607 153677628 -99578955 + AT_rich Low_complexity Low_complexity 1 21 0 247 308 147 44 chr2 153677854 153677872 -99578711 - MIR3 SINE MIR -61 147 132 1150 204 5 14 chr2 153677872 153678093 -99578490 + MER20 DNA MER1_type 1 219 0 247 308 147 44 chr2 153678093 153678246 -99578337 - MIR3 SINE MIR -76 132 4 434 277 72 0 chr2 153678654 153678820 -99577763 + L1ME4a LINE L1 5732 5909 -212 248 258 16 0 chr2 153678950 153679012 -99577571 - L2 LINE L2 0 3272 3210 299 360 36 22 chr2 153679403 153679542 -99577041 - L2 LINE L2 -216 3056 2916 491 272 212 78 chr2 153679607 153680205 -99576378 - L2 LINE L2 -490 2824 2308 410 242 45 51 chr2 153680205 153680383 -99576200 - MER5B DNA MER1_type -1 177 1 491 272 212 78 chr2 153680383 153680412 -99576171 - L2 LINE L2 -1006 2308 2284 1655 174 3 17 chr2 153680412 153680710 -99575873 + AluJb SINE Alu 1 294 -18 491 272 212 78 chr2 153680710 153680849 -99575734 - L2 LINE L2 -1030 2284 1954 24 0 0 0 chr2 153681008 153681032 -99575551 + AT_rich Low_complexity Low_complexity 1 24 0 502 296 133 56 chr2 153681535 153681805 -99574778 - L2 LINE L2 -4 3268 2978 1049 251 149 52 chr2 153682043 153682555 -99574028 - MLT1G1 LTR MaLR -2 593 25 225 0 0 0 chr2 153682555 153682580 -99574003 + (ATTG)n Simple_repeat Simple_repeat 1 25 0 1049 251 149 52 chr2 153682580 153682604 -99573979 - MLT1G1 LTR MaLR -570 25 5 1588 164 0 39 chr2 153682840 153683120 -99573463 + AluJo SINE Alu 29 297 -15 22 0 0 0 chr2 153683142 153683164 -99573419 + AT_rich Low_complexity Low_complexity 1 22 0 229 226 19 0 chr2 153683512 153683565 -99573018 + (TATG)n Simple_repeat Simple_repeat 3 56 0 422 267 107 27 chr2 153683984 153684134 -99572449 - MIR SINE MIR -41 221 60 305 108 0 15 chr2 153684307 153684372 -99572211 + (CA)n Simple_repeat Simple_repeat 2 65 0 423 38 0 0 chr2 153684372 153684425 -99572158 + (GA)n Simple_repeat Simple_repeat 2 54 0 31 26 0 0 chr2 153685462 153685500 -99571083 + AT_rich Low_complexity Low_complexity 1 38 0 374 366 72 31 chr2 153685644 153685936 -99570647 + L2 LINE L2 2957 3260 -12 849 258 148 60 chr2 153686624 153686860 -99569723 - L1MEd LINE L1 -2614 3515 3301 1967 165 0 0 chr2 153686860 153687163 -99569420 - AluSx SINE Alu -8 304 2 849 258 148 60 chr2 153687163 153688232 -99568351 - L1MEd LINE L1 -2828 3301 2094 562 294 95 30 chr2 153688719 153689353 -99567230 - L1MEd LINE L1 -4170 1959 877 446 312 30 90 chr2 153689535 153689769 -99566814 - L1MEd LINE L1 -5497 622 403 590 257 61 92 chr2 153689811 153690072 -99566511 + MIR SINE MIR 10 262 0 183 80 0 0 chr2 153690176 153690201 -99566382 + (A)n Simple_repeat Simple_repeat 1 25 0 919 209 0 0 chr2 153690781 153690944 -99565639 + AluJb SINE Alu 134 296 -16 412 302 98 26 chr2 153690953 153691258 -99565325 + L1ME4a LINE L1 5619 5945 -176 467 120 0 0 chr2 153691279 153691354 -99565229 + L1MA10 LINE L1 6251 6325 -9 386 341 89 0 chr2 153691742 153691921 -99564662 - MIR SINE MIR -21 241 47 640 254 92 62 chr2 153692075 153692651 -99563932 - HAL1 LINE L1 -970 1537 945 387 176 14 14 chr2 153692715 153692789 -99563794 + L1MC4 LINE L1 6900 6973 -1069 * 1147 307 61 16 chr2 153692780 153693390 -99563193 + L1MC4 LINE L1 7282 7918 -124 1827 140 33 0 chr2 153693392 153693692 -99562891 - MER44D DNA MER2_type 0 609 30 607 178 0 93 chr2 153694509 153694668 -99561915 + FLAM_C SINE Alu 1 147 0 270 266 111 73 chr2 153695568 153695832 -99560751 - L1ME4a LINE L1 -226 5895 5616 2125 110 0 7 chr2 153695832 153696123 -99560460 + AluSg SINE Alu 1 289 -21 270 266 111 73 chr2 153696123 153696174 -99560409 - L1ME4a LINE L1 -505 5616 5568 301 325 67 40 chr2 153696613 153696942 -99559641 - L1ME4a LINE L1 -159 5962 5625 317 302 113 59 chr2 153696960 153697182 -99559401 + MIR SINE MIR 29 262 0 1902 151 7 3 chr2 153697504 153697788 -99558795 - AluJb SINE Alu -27 285 1 514 270 38 66 chr2 153697828 153698039 -99558544 + MER20B DNA MER1_type 7 211 -572 633 240 29 23 chr2 153699355 153699530 -99557053 - MIR SINE MIR -14 248 73 226 308 15 0 chr2 153699726 153699791 -99556792 + L2 LINE L2 3191 3256 -16 1196 221 15 11 chr2 153699972 153700234 -99556349 + AluJo SINE Alu 1 263 -49 4694 214 47 21 chr2 153700263 153701553 -99555030 - L1MB8 LINE L1 -112 6066 4703 1478 173 11 46 chr2 153701553 153701836 -99554747 - AluJb SINE Alu -17 295 23 4694 214 47 21 chr2 153701836 153702600 -99553983 - L1MB8 LINE L1 -1475 4703 3960 566 259 49 5 chr2 153702745 153702930 -99553653 + MIR SINE MIR 70 262 0 227 365 160 31 chr2 153704887 153705476 -99551107 - L2 LINE L2 -575 2739 2075 1804 149 14 3 chr2 153705641 153705930 -99550653 + AluSx SINE Alu 2 293 -19 1294 201 0 4 chr2 153705999 153706233 -99550350 + AluJo SINE Alu 63 295 -17 294 256 13 0 chr2 153706362 153706440 -99550143 + HsTC2 DNA Tc2 1 79 -1819 269 221 19 52 chr2 153706510 153706664 -99549919 + (TA)n Simple_repeat Simple_repeat 2 150 0 331 194 15 0 chr2 153706714 153706781 -99549802 + HsTC2 DNA Tc2 1 68 -1830 343 328 174 44 chr2 153707187 153707480 -99549103 + L2 LINE L2 2942 3272 0 2162 102 0 35 chr2 153707755 153708068 -99548515 + AluSx SINE Alu 1 302 -10 1342 104 36 5 chr2 153708608 153708829 -99547754 - AluY SINE Alu -1 310 83 2233 112 3 0 chr2 153709502 153709798 -99546785 - AluSp SINE Alu -16 297 1 698 165 9 0 chr2 153710215 153710330 -99546253 + FLAM_C SINE Alu 1 116 -17 2137 140 9 9 chr2 153710417 153710760 -99545823 + MER7A DNA MER2_type 3 343 -3 254 308 33 33 chr2 153710959 153711079 -99545504 - MIR SINE MIR -57 205 86 242 298 116 33 chr2 153711329 153711510 -99545073 - L2 LINE L2 -667 2647 2452 2243 78 3 32 chr2 153711940 153712248 -99544335 - AluSp SINE Alu -14 299 1 385 340 76 7 chr2 153712769 153712913 -99543670 - MIR3 SINE MIR -38 170 17 1577 181 3 35 chr2 153713499 153713809 -99542774 - AluJb SINE Alu -12 300 1 248 266 122 80 chr2 153714081 153714269 -99542314 + HAL1 LINE L1 737 932 -1575 23 0 0 0 chr2 153714308 153714331 -99542252 + AT_rich Low_complexity Low_complexity 1 23 0 952 184 6 0 chr2 153714383 153714541 -99542042 + FRAM SINE Alu 1 158 -18 27 20 0 41 chr2 153714543 153714568 -99542015 + AT_rich Low_complexity Low_complexity 1 25 -22 790 218 7 0 chr2 153714568 153714715 -99541868 + FRAM SINE Alu 1 148 -18 27 20 0 41 chr2 153714715 153714738 -99541845 + AT_rich Low_complexity Low_complexity 25 47 0 1907 262 132 39 chr2 153714744 153715859 -99540724 + HAL1 LINE L1 1096 2314 -193 578 154 96 0 chr2 153715864 153715968 -99540615 + MER6B DNA MER2_type 1 114 -162 435 157 0 0 chr2 153715954 153716024 -99540559 + MER6B DNA MER2_type 133 202 -8 * 485 277 43 32 chr2 153716025 153716213 -99540370 + HAL1 LINE L1 2318 2507 0 14266 48 1 1 chr2 153716217 153718742 -99537841 - L1PA5 LINE L1 -4 6150 3597 4922 226 51 65 chr2 153718921 153718999 -99537584 - L1M4c LINE L1 -4833 1709 1631 1321 186 102 18 chr2 153718999 153719274 -99537309 - AluJb SINE Alu -14 298 1 4922 226 51 65 chr2 153719274 153719954 -99536629 - L1M4c LINE L1 -4911 1631 943 1979 125 11 0 chr2 153719954 153720277 -99536306 - AluSx SINE Alu 0 326 1 4922 226 51 65 chr2 153720277 153721270 -99535313 - L1M4c LINE L1 -5599 943 67 268 248 8 0 chr2 153721274 153721326 -99535257 - MER5A DNA MER1_type -74 115 50 207 270 0 16 chr2 153721517 153721580 -99535003 + L2 LINE L2 2308 2369 -945 30 27 0 0 chr2 153721641 153721678 -99534905 + AT_rich Low_complexity Low_complexity 1 37 0 7709 20 0 0 chr2 153721678 153722809 -99533774 - L1PA2 LINE L1 -2 6153 5022 351 283 220 0 chr2 153723021 153723198 -99533385 + L1ME LINE L1 5609 5824 -297 295 274 106 9 chr2 153723263 153723376 -99533207 - MER103 DNA DNA -31 135 12 850 275 125 12 chr2 153723415 153723845 -99532738 - MLT1G1 LTR MaLR -55 540 1 503 259 119 5 chr2 153724567 153724768 -99531815 + HAL1 LINE L1 1657 1880 -627 2627 239 43 1 chr2 153724897 153725661 -99530922 - L1MEc LINE L1 -3129 3086 2291 639 192 122 6 chr2 153725711 153725867 -99530716 + MER58B DNA MER1_type 168 341 0 488 201 37 0 chr2 153725910 153726044 -99530539 - L1MEc LINE L1 -4105 2291 2153 * 18450 99 12 8 chr2 153726040 153729812 -99526771 - L1M1 LINE L1 0 7574 3819 228 35 0 0 chr2 153729812 153729841 -99526742 + (TCTCTG)n Simple_repeat Simple_repeat 2 30 0 18450 99 12 8 chr2 153729841 153731563 -99525020 - L1M1 LINE L1 -3755 3819 17 531 206 35 106 chr2 153731566 153731765 -99524818 + MER46C DNA MER2_type 125 309 -29 541 277 54 112 chr2 153731781 153732274 -99524309 - L2 LINE L2 -157 3156 2670 809 241 14 45 chr2 153732406 153732626 -99523957 - AluJo SINE Alu -14 298 86 325 319 109 7 chr2 153732846 153732984 -99523599 + MIR3 SINE MIR 12 163 -45 480 290 21 28 chr2 153734565 153734710 -99521873 - L3b LINE CR1 -73 1510 1367 25 0 0 0 chr2 153734763 153734788 -99521795 + AT_rich Low_complexity Low_complexity 1 25 0 1107 186 5 0 chr2 153734902 153735096 -99521487 + MER2 DNA MER2_type 7 201 -144 1414 158 108 58 chr2 153735534 153735744 -99520839 - Tigger1 DNA MER2_type 0 2418 2181 1886 151 0 0 chr2 153735744 153736016 -99520567 - AluJb SINE Alu -30 282 11 1414 158 108 58 chr2 153736016 153736167 -99520416 - Tigger1 DNA MER2_type -237 2181 2039 8935 146 24 28 chr2 153736186 153737735 -99518848 - Tigger1 DNA MER2_type -875 1543 2 401 270 97 75 chr2 153737739 153737965 -99518618 + MIR SINE MIR 18 248 -14 2019 181 86 12 chr2 153738482 153738914 -99517669 - MLT1C LTR MaLR -2 465 2 24 0 0 0 chr2 153738920 153738944 -99517639 + AT_rich Low_complexity Low_complexity 1 24 0 240 185 0 0 chr2 153738955 153739009 -99517574 + (TG)n Simple_repeat Simple_repeat 2 55 0 297 0 0 0 chr2 153739610 153739643 -99516940 + (CA)n Simple_repeat Simple_repeat 2 34 0 1520 164 34 65 chr2 153739647 153739819 -99516764 - AluJo SINE Alu -28 284 123 4313 54 0 2 chr2 153739819 153740353 -99516230 + L1PA5 LINE L1 5622 6154 0 1520 164 34 65 chr2 153740353 153740473 -99516110 - AluJo SINE Alu -189 123 1 451 221 89 146 chr2 153740649 153741192 -99515391 - L1MEc LINE L1 -5078 992 526 681 287 54 87 chr2 153741414 153741839 -99514744 - L1MEc LINE L1 -5617 453 43 373 314 114 11 chr2 153741936 153742111 -99514472 + MIR SINE MIR 34 226 -36 21 0 0 0 chr2 153743472 153743493 -99513090 + AT_rich Low_complexity Low_complexity 1 21 0 266 137 98 0 chr2 153743896 153743947 -99512636 + L2 LINE L2 3255 3310 -3 451 250 83 0 chr2 153744093 153744201 -99512382 + MIR SINE MIR 92 208 -54 585 221 35 0 chr2 153744538 153744651 -99511932 - L2 LINE L2 -4 3309 3193 838 120 8 0 chr2 153745033 153745150 -99511433 + AluJ SINE Alu 7 124 -188 1439 99 0 5 chr2 153745150 153745342 -99511241 - AluSg/x SINE Alu -13 299 109 865 174 0 60 chr2 153745359 153745526 -99511057 + AluJ SINE Alu 132 288 -24 205 230 162 14 chr2 153745810 153745884 -99510699 + MIR SINE MIR 73 157 -105 283 298 129 28 chr2 153746000 153746178 -99510405 - MIR SINE MIR -14 248 53 2190 114 17 0 chr2 153746412 153746711 -99509872 + AluSg SINE Alu 1 304 -6 345 207 136 29 chr2 153746872 153747012 -99509571 - HAL1 LINE L1 -306 2201 2047 28 0 0 0 chr2 153747542 153747570 -99509013 + AT_rich Low_complexity Low_complexity 1 28 0 579 319 87 43 chr2 153748045 153748577 -99508006 + L1MEd LINE L1 280 834 -5285 622 284 138 40 chr2 153748609 153749204 -99507379 + L1M4 LINE L1 4684 5336 -810 804 188 135 5 chr2 153749704 153749896 -99506687 + MER20 DNA MER1_type 1 217 -2 2054 93 67 7 chr2 153750032 153750364 -99506219 + L1PA13 LINE L1 5800 6140 -21 438 263 125 70 chr2 153750577 153750825 -99505758 - MIR SINE MIR -6 256 2 22 0 0 0 chr2 153750888 153750910 -99505673 + AT_rich Low_complexity Low_complexity 1 22 0 200 290 32 32 chr2 153750942 153751035 -99505548 + L2 LINE L2 3220 3312 -1 263 222 0 0 chr2 153751934 153751988 -99504595 + MER20B DNA MER1_type 36 89 -694 1608 186 14 7 chr2 153752106 153752401 -99504182 + AluJo SINE Alu 3 299 -13 1713 176 0 0 chr2 153752506 153752773 -99503810 - AluJb SINE Alu -45 267 1 189 320 0 0 chr2 153753145 153753220 -99503363 - MIR SINE MIR -3 259 185 998 154 0 6 chr2 153753395 153753557 -99503026 - Tigger1 DNA MER2_type 0 2418 2258 2490 94 53 3 chr2 153753568 153753907 -99502676 - LTR18A LTR ERVL 0 357 2 29617 152 7 8 chr2 153753909 153758441 -99498142 - HERVL18 LTR ERVL 0 6047 1520 810 110 29 7 chr2 153758545 153758681 -99497902 + L1MA1 LINE L1 5814 5952 -350 1009 161 0 44 chr2 153758693 153758873 -99497710 + AluJb SINE Alu 12 183 -129 2060 89 38 19 chr2 153758873 153759187 -99497396 + L1MA1 LINE L1 5979 6298 -4 1305 211 31 31 chr2 153759194 153759512 -99497071 - L1M4 LINE L1 -1918 4228 3911 266 312 8 32 chr2 153759717 153759842 -99496741 - L1MEc LINE L1 -4667 2471 2350 796 164 46 73 chr2 153759849 153760068 -99496515 - AluY SINE Alu 0 311 99 2364 44 0 4 chr2 153760679 153760951 -99495632 - AluY SINE Alu -18 293 23 2042 125 3 10 chr2 153760951 153761255 -99495328 - AluSx SINE Alu -10 302 1 1711 225 45 18 chr2 153761294 153761850 -99494733 - L1MEc LINE L1 -4784 2175 1605 451 184 0 0 chr2 153763208 153763311 -99493272 - L1MEc LINE L1 -5236 1623 1521 2037 112 0 56 chr2 153763314 153763635 -99492948 - AluSx SINE Alu -9 303 1 3676 206 41 80 chr2 153763635 153764602 -99491981 - L1MEc LINE L1 -5459 1400 471 547 258 56 17 chr2 153764703 153764881 -99491702 - L1MC/D LINE L1 -2024 5784 5600 302 294 80 43 chr2 153764962 153765125 -99491458 + MIR SINE MIR 34 202 -60 235 250 47 0 chr2 153765276 153765340 -99491243 - L1MD2 LINE L1 -228 6131 6065 * 462 262 16 25 chr2 153765333 153765455 -99491128 - L1MC/D LINE L1 -2192 5616 5496 781 146 0 23 chr2 153766220 153766350 -99490233 - FLAM_C SINE Alu -6 127 1 29 47 0 0 chr2 153766363 153766406 -99490177 + AT_rich Low_complexity Low_complexity 1 43 0 1971 195 20 15 chr2 153768044 153768438 -99488145 - MSTD LTR MaLR 0 396 1 2753 7 0 0 chr2 153768610 153768906 -99487677 + AluYa5 SINE Alu 1 296 -15 409 213 119 134 chr2 153769882 153770240 -99486343 + L1ME4a LINE L1 5486 5836 -285 2182 125 0 7 chr2 153770446 153770749 -99485834 - AluSx SINE Alu -11 301 1 1875 206 15 8 chr2 153771128 153771527 -99485056 - L1MB7 LINE L1 -302 5882 5481 1623 225 26 74 chr2 153771530 153772149 -99484434 - L1MB7 LINE L1 -1334 4812 4224 1191 184 18 9 chr2 153772251 153772468 -99484115 + HERVL18 LTR ERVL 4436 4654 -1393 988 218 0 0 chr2 153772455 153772629 -99483954 - HERVL18 LTR ERVL -5864 183 10 * 2280 131 53 0 chr2 153772646 153772983 -99483600 - LTR18A LTR ERVL -2 355 1 4150 133 10 16 chr2 153772986 153773663 -99482920 - Tigger1 DNA MER2_type -169 2249 1577 9386 118 40 26 chr2 153773806 153775354 -99481229 - Tigger1 DNA MER2_type -827 1591 22 208 319 14 42 chr2 153775474 153775546 -99481037 - MIR SINE MIR -111 151 82 459 222 20 191 chr2 153775580 153775832 -99480751 - MIR SINE MIR -50 212 4 347 368 153 17 chr2 153775873 153776338 -99480245 - L2 LINE L2 -544 2770 2243 622 216 24 0 chr2 153777296 153777421 -99479162 + FLAM_C SINE Alu 11 138 -5 545 241 15 23 chr2 153777449 153777582 -99479001 - MIR SINE MIR -123 139 8 461 275 50 0 chr2 153777653 153777773 -99478810 - LTR67 LTR ERVL 0 557 432 243 61 0 0 chr2 153778160 153778193 -99478390 + (CA)n Simple_repeat Simple_repeat 2 34 0 304 269 37 46 chr2 153778322 153778430 -99478153 - L1ME4a LINE L1 -58 6063 5957 458 295 39 19 chr2 153778539 153778797 -99477786 - L1ME4a LINE L1 -315 5806 5544 277 306 176 0 chr2 153778879 153778987 -99477596 - L2 LINE L2 -1 3312 3186 1029 300 53 23 chr2 153779160 153779723 -99476860 + L1 LINE L1 3656 4235 -1911 326 266 133 28 chr2 153779725 153779943 -99476640 + L1 LINE L1 4271 4511 -1635 272 273 26 13 chr2 153780040 153780117 -99476466 - L2 LINE L2 -12 3301 3224 23 68 0 0 chr2 153780880 153780924 -99475659 + AT_rich Low_complexity Low_complexity 1 44 0 313 277 30 10 chr2 153780949 153781050 -99475533 - L1ME4a LINE L1 -1112 5034 4932 1605 189 0 3 chr2 153781181 153781466 -99475117 - AluJb SINE Alu -1 311 28 565 192 8 17 chr2 153781500 153781620 -99474963 - FLAM_C SINE Alu -20 123 5 24 32 0 0 chr2 153782003 153782034 -99474549 + AT_rich Low_complexity Low_complexity 1 31 0 408 261 68 57 chr2 153782055 153782231 -99474352 + L2 LINE L2 3136 3313 0 404 287 86 33 chr2 153782351 153782595 -99473988 - L1ME4a LINE L1 -2898 3248 2992 669 310 104 30 chr2 153782650 153783360 -99473223 - HAL1 LINE L1 -823 1684 922 2081 133 7 0 chr2 153783630 153783931 -99472652 - AluSx SINE Alu -9 303 1 5388 146 32 17 chr2 153784912 153786072 -99470511 - L1MA8 LINE L1 -4 6287 5107 1899 206 34 96 chr2 153786347 153787084 -99469499 + LTR8 LTR ERV1 1 691 0 1281 70 12 0 chr2 153787475 153787647 -99468936 - L1PA7 LINE L1 -3 6151 5978 266 274 119 60 chr2 153787833 153787959 -99468624 - HAL1 LINE L1 -834 1673 1556 2330 99 0 26 chr2 153787959 153788271 -99468312 - AluSq SINE Alu -8 305 2 266 274 119 60 chr2 153788271 153788590 -99467993 - HAL1 LINE L1 -951 1556 1202 2038 181 27 7 chr2 153788594 153788998 -99467585 - MLT2D LTR ERVL -2 412 1 33 56 0 0 chr2 153789120 153789174 -99467409 + AT_rich Low_complexity Low_complexity 1 54 0 1622 195 0 26 chr2 153789271 153789578 -99467005 + AluJo SINE Alu 1 299 -13 829 271 78 13 chr2 153789584 153789971 -99466612 - L1MC4 LINE L1 -2 8040 7629 400 136 0 30 chr2 153790745 153790811 -99465772 - FLAM_A SINE Alu -11 122 59 322 260 67 33 chr2 153791120 153791137 -99465446 - L1MA10 LINE L1 -2 6332 6316 1381 222 32 0 chr2 153791137 153791448 -99465135 - L1ME1 LINE L1 -8 6158 5838 314 273 69 62 chr2 153791456 153791745 -99464838 - L1MEc LINE L1 -3344 2871 2581 2454 186 25 35 chr2 153791872 153792356 -99464227 - MLT2B3 LTR ERVL 0 554 76 1618 163 17 14 chr2 153792397 153792685 -99463898 + AluJo SINE Alu 6 294 -18 418 132 0 0 chr2 153792761 153792829 -99463754 - MLT2B3 LTR ERVL -486 68 1 366 289 95 46 chr2 153792830 153793021 -99463562 - L1MEc LINE L1 -3819 2396 2234 987 167 12 6 chr2 153793021 153793189 -99463394 - FAM SINE Alu -6 169 1 366 289 95 46 chr2 153793189 153793361 -99463222 - L1MEc LINE L1 -3981 2234 2072 279 93 0 0 chr2 153793373 153793416 -99463167 + (A)n Simple_repeat Simple_repeat 1 43 0 1774 174 6 3 chr2 153793660 153793971 -99462612 - AluJb SINE Alu 0 312 1 235 328 80 28 chr2 153794019 153794306 -99462277 - HAL1 LINE L1 -833 1674 1373 251 283 56 15 chr2 153794469 153794667 -99461916 - L1MEc LINE L1 -5020 1185 980 203 250 0 77 chr2 153794676 153794780 -99461803 + T-rich Low_complexity Low_complexity 2 97 0 324 329 158 0 chr2 153795603 153795749 -99460834 + MIR SINE MIR 23 191 -71 191 167 24 0 chr2 153795784 153795826 -99460757 + (TA)n Simple_repeat Simple_repeat 1 43 0 25 65 0 0 chr2 153795950 153795996 -99460587 + AT_rich Low_complexity Low_complexity 1 46 0 295 319 90 7 chr2 153796235 153796387 -99460196 + MIR SINE MIR 20 190 -62 488 228 57 42 chr2 153797185 153797378 -99459205 - L1MC4a LINE L1 -1758 6050 5855 5975 158 6 23 chr2 153797486 153799384 -99457199 + L1PA16 LINE L1 4307 6166 0 27 29 0 0 chr2 153800176 153800210 -99456373 + AT_rich Low_complexity Low_complexity 1 34 0 316 203 130 0 chr2 153800301 153800370 -99456213 - L2 LINE L2 -4 3268 3191 300 230 54 0 chr2 153800658 153800732 -99455851 - MIR SINE MIR -64 198 121 540 198 35 0 chr2 153801114 153801230 -99455353 + MIR SINE MIR 68 187 -75 393 22 0 0 chr2 153801274 153801320 -99455263 + (TG)n Simple_repeat Simple_repeat 1 46 0 199 191 0 0 chr2 153801411 153801453 -99455130 - MIR SINE MIR -70 192 151 341 320 20 7 chr2 153801732 153801882 -99454701 + L1MC4 LINE L1 7419 7570 -472 180 0 0 0 chr2 153802381 153802401 -99454182 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 197 350 20 50 chr2 153803529 153803629 -99452954 + L2 LINE L2 2997 3093 -179 242 290 16 0 chr2 153803688 153803750 -99452833 + L2 LINE L2 3204 3266 -6 436 242 17 45 chr2 153803751 153803922 -99452661 + L1MC4 LINE L1 7476 7677 -172 21 0 0 0 chr2 153804004 153804025 -99452558 + AT_rich Low_complexity Low_complexity 1 21 0 238 269 74 28 chr2 153804642 153804750 -99451833 - L1MC/D LINE L1 -1882 5926 5814 1632 211 0 0 chr2 153805463 153805766 -99450817 + AluJb SINE Alu 1 303 -9 303 355 115 15 chr2 153806168 153806368 -99450215 + MIR SINE MIR 20 239 -23 1683 169 7 3 chr2 153806399 153806712 -99449871 - AluJo SINE Alu 0 314 1 21 0 0 0 chr2 153806743 153806764 -99449819 + AT_rich Low_complexity Low_complexity 1 21 0 1679 167 33 4 chr2 153806765 153807041 -99449542 - AluJb SINE Alu -26 286 3 3544 244 99 77 chr2 153807416 153807517 -99449066 + HAL1 LINE L1 11 108 -2399 1521 215 6 10 chr2 153807517 153807828 -99448755 + AluJo SINE Alu 1 310 -2 3544 244 99 77 chr2 153807828 153808279 -99448304 + HAL1 LINE L1 108 548 -1959 1957 138 0 51 chr2 153808279 153808590 -99447993 - AluSx SINE Alu -17 295 1 3544 244 99 77 chr2 153808590 153809653 -99446930 + HAL1 LINE L1 548 1662 -845 796 242 113 43 chr2 153809715 153810112 -99446471 + HAL1 LINE L1 1950 2374 -133 386 237 86 26 chr2 153810758 153810910 -99445673 + HAL1 LINE L1 2347 2507 0 658 292 143 5 chr2 153811128 153811344 -99445239 + MIR SINE MIR 14 259 -3 218 268 71 0 chr2 153811631 153811687 -99444896 + MIR SINE MIR 91 150 -112 294 276 86 26 chr2 153811778 153811894 -99444689 + MLT1K LTR MaLR 122 244 -344 276 30 0 0 chr2 153812033 153812066 -99444517 + (TG)n Simple_repeat Simple_repeat 1 33 0 21 0 0 0 chr2 153812651 153812672 -99443911 + AT_rich Low_complexity Low_complexity 1 21 0 41554 41 24 2 chr2 153813297 153819307 -99437276 + L1PA3 LINE L1 15 6155 0 218 306 46 37 chr2 153819705 153819813 -99436770 - L2 LINE L2 -8 3305 3197 777 184 0 0 chr2 153820264 153820389 -99436194 + FLAM_C SINE Alu 1 125 -8 1464 109 45 5 chr2 153820723 153820944 -99435639 - MER30 DNA MER1_type 0 230 1 7772 185 25 17 chr2 153821162 153821496 -99435087 + L1PB4 LINE L1 3155 3485 -2671 1725 160 11 14 chr2 153821496 153821777 -99434806 + AluJb SINE Alu 1 280 -32 203 77 0 26 chr2 153821786 153821825 -99434758 + (CAA)n Simple_repeat Simple_repeat 2 39 0 7772 185 25 17 chr2 153821825 153823137 -99433446 + L1PB4 LINE L1 3492 4792 -1364 1900 146 10 0 chr2 153823137 153823425 -99433158 + AluSx SINE Alu 1 291 -21 7772 185 25 17 chr2 153823425 153824690 -99431893 + L1PB4 LINE L1 4792 6153 -3 2165 72 3 69 chr2 153824772 153825078 -99431505 - AluSp SINE Alu -19 294 9 24 0 0 0 chr2 153825392 153825416 -99431167 + AT_rich Low_complexity Low_complexity 1 24 0 242 286 0 57 chr2 153825448 153825518 -99431065 - L2 LINE L2 0 3313 3248 2026 155 124 5 chr2 153825906 153826286 -99430297 + MSTA LTR MaLR 1 425 -3 474 211 0 0 chr2 153827033 153827109 -99429474 + MER31B LTR ERV1 16 91 -375 463 175 48 10 chr2 153827300 153827403 -99429180 + MER31B-int LTR ERV1 1699 1805 -3131 243 207 5 0 chr2 153827404 153827459 -99429124 + AluJ/monomer SINE Alu 1 39 -264 2098 109 3 3 chr2 153827482 153827775 -99428808 + AluSx SINE Alu 9 301 -11 430 233 14 7 chr2 153827904 153828041 -99428542 + MER31B-int LTR ERV1 1547 2084 -2852 30995 113 11 60 chr2 153828057 153834504 -99422079 + L1PA7 LINE L1 12 6148 -6 1012 189 40 82 chr2 153834513 153834893 -99421690 + MER31B-int LTR ERV1 2099 2462 -2474 861 235 34 20 chr2 153834903 153835363 -99421220 + MER31B-int LTR ERV1 2573 4323 -1623 5000 173 131 101 chr2 153835384 153836874 -99419709 + MER31B-int LTR ERV1 3381 4915 -21 1448 182 149 52 chr2 153836875 153837060 -99419523 + MER31B LTR ERV1 1 167 -299 2424 14 3 14 chr2 153837060 153837371 -99419212 - AluYa5 SINE Alu 0 309 2 1448 182 149 52 chr2 153837371 153837608 -99418975 + MER31B LTR ERV1 167 465 -1 916 272 25 4 chr2 153837760 153838003 -99418580 + MIR SINE MIR 15 262 0 364 179 0 48 chr2 153838432 153838516 -99418067 + MER116 DNA Mariner 1 80 0 227 121 45 45 chr2 153839153 153839219 -99417364 + (TATAA)n Simple_repeat Simple_repeat 4 69 0 1053 179 27 27 chr2 153839307 153839530 -99417053 + AluJb SINE Alu 87 309 -3 198 307 30 30 chr2 153839920 153840021 -99416562 + L2 LINE L2 2653 2753 -561 4558 145 7 7 chr2 153840074 153840785 -99415798 + MER50 LTR ERV1 1 711 -23 445 256 31 8 chr2 153841072 153841201 -99415382 - LTR67 LTR ERVL -15 542 411 517 311 33 92 chr2 153841270 153841575 -99415008 - LTR67 LTR ERVL -269 288 2 220 259 78 78 chr2 153841749 153841802 -99414781 - MER5A DNA MER1_type -14 175 123 2246 97 10 3 chr2 153841802 153842092 -99414491 + AluSq SINE Alu 3 294 -19 220 259 78 78 chr2 153842092 153842154 -99414429 - MER5A DNA MER1_type -65 124 60 2022 135 3 0 chr2 153842725 153843022 -99413561 + AluSx SINE Alu 1 298 -14 2040 209 40 12 chr2 153843539 153843969 -99412614 + L1M4b LINE L1 9 450 -6409 7261 41 5 0 chr2 153844070 153844967 -99411616 + L1PA4 LINE L1 5255 6155 0 14801 156 31 15 chr2 153844967 153846418 -99410165 + L1MA2 LINE L1 2486 3913 -3810 1949 126 6 55 chr2 153846418 153846743 -99409840 + AluSx SINE Alu 1 309 -3 14801 156 31 15 chr2 153846743 153848406 -99408177 + L1MA2 LINE L1 3913 5549 -2174 186 43 0 0 chr2 153848406 153848429 -99408154 + (CA)n Simple_repeat Simple_repeat 2 24 0 14801 156 31 15 chr2 153848429 153850466 -99406117 + L1MA2 LINE L1 5549 7723 0 349 199 96 103 chr2 153850470 153850606 -99405977 - MER46C DNA MER2_type -199 139 5 367 296 134 0 chr2 153850608 153850750 -99405833 + L2 LINE L2 3153 3313 0 27 0 0 0 chr2 153850842 153850869 -99405714 + AT_rich Low_complexity Low_complexity 1 27 0 189 283 50 0 chr2 153851106 153851166 -99405417 + MIR3 SINE MIR 106 168 -40 415 132 0 26 chr2 153851277 153851353 -99405230 - L1 LINE L1 -1386 4760 4687 571 228 0 0 chr2 153851532 153851633 -99404950 + Tigger3b DNA MER2_type 2 102 -1129 * 5252 116 87 6 chr2 153851631 153852193 -99404390 + Tigger3b DNA MER2_type 274 936 -2092 203 61 30 0 chr2 153852193 153852226 -99404357 + (CTCA)n Simple_repeat Simple_repeat 1 34 0 5252 116 87 6 chr2 153852226 153852549 -99404034 + Tigger3b DNA MER2_type 936 1231 0 222 329 14 14 chr2 153852890 153852963 -99403620 - MIR SINE MIR -188 74 2 657 66 0 11 chr2 153853124 153853215 -99403368 - HERVH LTR ERV1 -5439 2274 2185 196 267 0 67 chr2 153854359 153854434 -99402149 + MIR SINE MIR 102 171 -91 1355 198 72 25 chr2 153855256 153855534 -99401049 + AluJo SINE Alu 1 291 -21 243 79 0 0 chr2 153855556 153855594 -99400989 + (CAAAAA)n Simple_repeat Simple_repeat 1 38 0 362 216 108 45 chr2 153855773 153855884 -99400699 - L2 LINE L2 -19 3294 3177 1344 208 76 3 chr2 153856594 153856911 -99399672 + MER58B DNA MER1_type 1 340 -1 24 32 0 0 chr2 153857726 153857757 -99398826 + AT_rich Low_complexity Low_complexity 1 31 0 333 197 13 26 chr2 153858369 153858445 -99398138 - MER46C DNA MER2_type -9 329 255 1874 187 39 12 chr2 153858604 153859010 -99397573 + L1MB7 LINE L1 5763 6179 -5 1846 162 3 14 chr2 153859035 153859325 -99397258 + AluJb SINE Alu 6 292 -20 21 0 0 0 chr2 153859489 153859510 -99397073 + AT_rich Low_complexity Low_complexity 1 21 0 180 77 0 0 chr2 153859884 153859910 -99396673 + (GAAA)n Simple_repeat Simple_repeat 4 29 0 31 58 0 0 chr2 153860570 153860622 -99395961 + AT_rich Low_complexity Low_complexity 1 52 0 2261 157 56 12 chr2 153861082 153861490 -99395093 + MSTB LTR MaLR 1 426 0 1534 188 55 47 chr2 153861491 153861853 -99394730 - MLT1A1 LTR MaLR 0 365 1 1832 139 0 18 chr2 153862522 153862803 -99393780 + AluSx SINE Alu 1 276 -36 264 59 0 0 chr2 153862812 153862846 -99393737 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 765 203 51 46 chr2 153862977 153863174 -99393409 + MLT1D LTR MaLR 308 505 0 281 303 90 6 chr2 153863329 153863507 -99393076 - L1 LINE L1 -1915 4231 4039 795 302 61 39 chr2 153863699 153864139 -99392444 + LTR38 LTR ERV1 96 545 -11 1673 126 72 3 chr2 153864447 153864740 -99391843 + L1MA4 LINE L1 5981 6293 -7 221 224 20 0 chr2 153864871 153864920 -99391663 + (TA)n Simple_repeat Simple_repeat 1 50 0 1514 135 73 8 chr2 153864940 153865199 -99391384 - AluJb SINE Alu -16 296 21 738 173 8 0 chr2 153865201 153865334 -99391249 - AluJb SINE Alu -178 134 1 2007 94 3 44 chr2 153865705 153866002 -99390581 + AluSx SINE Alu 18 302 -10 852 276 130 35 chr2 153866124 153866610 -99389973 - HAL1b LINE L1 -569 779 248 24 0 0 0 chr2 153866611 153866635 -99389948 + AT_rich Low_complexity Low_complexity 1 24 0 225 259 35 0 chr2 153866979 153867037 -99389546 + CT-rich Low_complexity Low_complexity 4 63 0 340 309 139 21 chr2 153867691 153867885 -99388698 - L1M4 LINE L1 -757 5389 5173 1402 131 5 9 chr2 153867956 153868170 -99388413 - AluSg/x SINE Alu -13 299 87 791 171 0 0 chr2 153868203 153868332 -99388251 - FLAM_C SINE Alu -4 129 1 1018 288 57 49 chr2 153868423 153868972 -99387611 + L2 LINE L2 2712 3258 -55 2339 217 66 41 chr2 153868972 153870058 -99386525 + LTR27 LTR ERV1 2 636 0 2264 102 0 7 chr2 153870364 153870668 -99385915 - AluY SINE Alu -9 302 1 425 312 146 10 chr2 153870792 153870997 -99385586 - L2 LINE L2 -89 3224 2992 406 318 50 10 chr2 153871002 153871200 -99385383 + MARNA DNA Mariner 374 579 -7 1754 163 35 3 chr2 153871302 153871591 -99384992 - AluJb SINE Alu -14 298 1 1247 187 19 11 chr2 153871735 153872046 -99384537 + MLT2C1 LTR ERVL 1 345 -52 360 155 10 31 chr2 153872046 153872143 -99384440 + (CATATA)n Simple_repeat Simple_repeat 4 98 0 239 89 107 89 chr2 153872143 153872199 -99384384 + MLT2C1 LTR ERVL 464 520 0 402 258 104 49 chr2 153872619 153872782 -99383801 - MIR SINE MIR -48 214 43 365 299 198 0 chr2 153872986 153872997 -99383586 + L1ME LINE L1 5589 5597 -524 2011 118 0 4 chr2 153872997 153873277 -99383306 + AluSq SINE Alu 35 313 0 365 299 198 0 chr2 153873277 153873462 -99383121 + L1ME LINE L1 5597 5824 -297 295 274 106 9 chr2 153873527 153873640 -99382943 - MER103 DNA DNA -31 135 12 850 275 125 12 chr2 153873679 153874109 -99382474 - MLT1G1 LTR MaLR -55 540 1 503 259 119 5 chr2 153874831 153875032 -99381551 + HAL1 LINE L1 1657 1880 -627 2630 239 43 1 chr2 153875161 153875925 -99380658 - L1MEc LINE L1 -3129 3086 2291 639 192 122 6 chr2 153875975 153876131 -99380452 + MER58B DNA MER1_type 168 341 0 488 201 37 0 chr2 153876174 153876308 -99380275 - L1MEc LINE L1 -4105 2291 2153 * 43019 32 21 1 chr2 153876304 153882332 -99374251 - L1HS LINE L1 0 6155 3 601 244 25 38 chr2 153882304 153882374 -99374209 - L1MEc LINE L1 -4190 2137 2068 * 1750 181 13 0 chr2 153882374 153882673 -99373910 - AluJb SINE Alu -9 303 1 601 244 25 38 chr2 153882673 153882840 -99373743 - L1MEc LINE L1 -4259 2068 1903 1100 196 53 0 chr2 153882843 153883052 -99373531 - MER46A DNA MER2_type -16 220 1 1154 261 114 60 chr2 153883052 153883840 -99372743 - L1MEc LINE L1 -4428 1968 1101 876 203 6 6 chr2 153883840 153884003 -99372580 - FAM SINE Alu -12 163 1 1154 261 114 60 chr2 153884003 153884323 -99372260 - L1MEc LINE L1 -5295 1101 800 1713 124 193 3 chr2 153884665 153884971 -99371612 - THE1B LTR MaLR 0 364 1 301 267 0 0 chr2 153885159 153885249 -99371334 + L1MEc LINE L1 801 890 -5506 1157 162 64 39 chr2 153885250 153885454 -99371129 - AluJo SINE Alu -100 212 4 284 257 106 0 chr2 153885589 153885695 -99370888 - L1MC/D LINE L1 -470 5651 5551 446 278 102 69 chr2 153886405 153886764 -99369819 + L1MEc LINE L1 842 1293 -1283 1749 152 35 3 chr2 153886764 153887053 -99369530 + AluSx SINE Alu 1 298 -14 446 278 102 69 chr2 153887053 153887084 -99369499 + L1MEc LINE L1 1293 1322 -1254 37 0 0 0 chr2 153887109 153887146 -99369437 + AT_rich Low_complexity Low_complexity 1 37 0 630 307 104 40 chr2 153888369 153889223 -99367360 + L1ME LINE L1 3447 4351 -1795 301 309 66 23 chr2 153889378 153889748 -99366835 + L1ME LINE L1 5299 5687 -483 328 225 54 39 chr2 153889994 153890123 -99366460 + L1MC5 LINE L1 7796 7926 -35 21 0 0 0 chr2 153890258 153890279 -99366304 + AT_rich Low_complexity Low_complexity 1 21 0 890 210 0 0 chr2 153890382 153890544 -99366039 + AluJb SINE Alu 137 298 -14 587 252 0 8 chr2 153890575 153890702 -99365881 + FLAM_A SINE Alu 1 126 -7 252 86 0 0 chr2 153890703 153890738 -99365845 + (TA)n Simple_repeat Simple_repeat 1 35 0 405 246 123 35 chr2 153891134 153891305 -99365278 + Charlie8 DNA MER1_type 95 280 -2137 2500 37 0 3 chr2 153891706 153892004 -99364579 - AluY SINE Alu -14 297 1 546 187 0 0 chr2 153893066 153893173 -99363410 - FLAM_A SINE Alu -6 136 30 301 333 32 24 chr2 153893265 153893391 -99363192 - MER5B DNA MER1_type -6 172 46 180 347 91 0 chr2 153893652 153893773 -99362810 - MER5A DNA MER1_type -3 186 55 22 0 0 0 chr2 153894178 153894200 -99362383 + AT_rich Low_complexity Low_complexity 1 22 0 2293 110 0 13 chr2 153894369 153894678 -99361905 + AluSx SINE Alu 2 306 -6 539 191 146 136 chr2 153895178 153895398 -99361185 - MIR SINE MIR 0 262 41 689 218 32 5 chr2 153895839 153896027 -99360556 - L1MA7 LINE L1 -21 6270 6078 * 4563 172 28 26 chr2 153896009 153897326 -99359257 - L1MA7 LINE L1 -518 5773 4449 558 198 0 9 chr2 153897339 153897450 -99359133 - AluJo SINE Alu -13 299 190 7127 179 83 16 chr2 153897452 153898913 -99357670 - MER52A LTR ERV1 -2 1753 195 301 289 0 0 chr2 153898914 153898990 -99357593 - MER52A LTR ERV1 -1679 76 1 1043 193 0 11 chr2 153898996 153899183 -99357400 - AluJo SINE Alu -125 187 3 5687 158 39 5 chr2 153899185 153900285 -99356298 - L1MA7 LINE L1 -1719 4427 3290 2607 43 0 0 chr2 153900879 153901181 -99355402 + AluY SINE Alu 1 302 -9 360 114 13 25 chr2 153902081 153902160 -99354423 + (TA)n Simple_repeat Simple_repeat 2 79 0 1014 178 6 11 chr2 153902306 153902480 -99354103 - AluJb SINE Alu -5 307 135 21 71 0 0 chr2 153903824 153903866 -99352717 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr2 153905503 153905524 -99351059 + AT_rich Low_complexity Low_complexity 1 21 0 292 221 39 0 chr2 153905666 153905743 -99350840 - MER116 DNA Mariner 0 80 1 803 137 14 14 chr2 153906202 153906341 -99350242 + MSTC LTR MaLR 290 428 0 240 270 157 9 chr2 153906910 153907025 -99349558 + MIR SINE MIR 107 238 -24 697 240 25 109 chr2 153907284 153907361 -99349222 - MIR SINE MIR -3 259 177 2028 111 24 3 chr2 153907361 153907650 -99348933 + AluSp SINE Alu 1 295 -18 697 240 25 109 chr2 153907650 153907855 -99348728 - MIR SINE MIR -85 177 1 890 269 67 13 chr2 153908688 153908986 -99347597 - LTR16C LTR ERVL 0 491 178 2289 87 3 0 chr2 153910671 153910959 -99345624 - AluSg SINE Alu -21 289 1 280 229 14 14 chr2 153910984 153911054 -99345529 - MER5B DNA MER1_type -108 70 1 266 280 147 0 chr2 153911090 153911165 -99345418 + MER117 DNA MER1_type 6 91 -106 254 265 103 0 chr2 153911176 153911244 -99345339 + MIR SINE MIR 40 114 -148 1481 129 137 8 chr2 153911495 153911777 -99344806 + AluJb SINE Alu 5 318 0 360 337 80 6 chr2 153911890 153912053 -99344530 + MIR SINE MIR 23 197 -65 2351 80 0 10 chr2 153912055 153912369 -99344214 + AluY SINE Alu 1 311 0 818 259 69 50 chr2 153912792 153913034 -99343549 - L1ME4a LINE L1 -224 5897 5644 819 117 0 0 chr2 153913034 153913154 -99343429 - L1MB5 LINE L1 -9 6165 6046 818 259 69 50 chr2 153913154 153913290 -99343293 - L1ME4a LINE L1 -477 5644 5512 1667 57 0 0 chr2 153913728 153913939 -99342644 + L1PA7 LINE L1 5944 6154 0 21 0 0 0 chr2 153913995 153914016 -99342567 + AT_rich Low_complexity Low_complexity 1 21 0 339 368 15 7 chr2 153914097 153914233 -99342350 - L2 LINE L2 -13 3300 3164 414 366 80 62 chr2 153914364 153914801 -99341782 - L2 LINE L2 -19 3253 2809 451 376 97 30 chr2 153914976 153915409 -99341174 + L2 LINE L2 2808 3269 -3 1248 269 91 25 chr2 153915644 153916118 -99340465 + L2 LINE L2 2800 3301 -12 37513 41 29 0 chr2 153916120 153920800 -99335783 + L1P LINE L1 3 4819 -1327 24 53 0 0 chr2 153921845 153921883 -99334700 + AT_rich Low_complexity Low_complexity 1 38 0 408 295 89 71 chr2 153922004 153922465 -99334118 + HAL1b LINE L1 276 673 -675 385 62 31 0 chr2 153923071 153923136 -99333447 + (TCTA)n Simple_repeat Simple_repeat 3 69 0 27 49 0 0 chr2 153923377 153923418 -99333165 + AT_rich Low_complexity Low_complexity 1 41 0 2179 92 7 3 chr2 153923459 153923775 -99332808 - AluSq SINE Alu 0 317 1 369 62 0 0 chr2 153924948 153924996 -99331587 + (TA)n Simple_repeat Simple_repeat 1 48 0 382 290 107 0 chr2 153925130 153925261 -99331322 - MIR SINE MIR -13 249 105 1662 166 7 14 chr2 153925606 153925895 -99330688 - AluJo SINE Alu -15 297 11 196 371 41 10 chr2 153925973 153926070 -99330513 - L2 LINE L2 0 3272 3173 27 0 0 0 chr2 153927084 153927111 -99329472 + AT_rich Low_complexity Low_complexity 1 27 0 2081 124 3 7 chr2 153927796 153928102 -99328481 - AluSx SINE Alu -5 307 3 186 133 0 0 chr2 153928574 153928604 -99327979 + (CATA)n Simple_repeat Simple_repeat 2 31 0 204 356 58 11 chr2 153928794 153928881 -99327702 + MIR3 SINE MIR 9 99 -109 6399 90 17 1 chr2 153929056 153930088 -99326495 + L1PA11 LINE L1 5123 6169 -5 1753 79 43 4 chr2 153930088 153930342 -99326241 + AluY SINE Alu 39 302 -9 2316 91 10 0 chr2 153930590 153930888 -99325695 - AluSx SINE Alu -11 301 1 374 320 78 47 chr2 153931048 153931370 -99325213 + L2 LINE L2 1596 1927 -1387 228 329 14 0 chr2 153931701 153931774 -99324809 + L2 LINE L2 2187 2260 -1054 630 234 50 7 chr2 153931775 153931916 -99324667 + LTR33 LTR ERVL 47 193 -328 276 258 113 40 chr2 153932014 153932138 -99324445 + LTR33 LTR ERVL 389 521 0 2428 56 7 3 chr2 153932491 153932793 -99323790 - AluY SINE Alu -8 303 1 185 0 40 0 chr2 153932802 153932827 -99323756 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 14006 32 0 0 chr2 153932827 153935268 -99321315 - L1PA4 LINE L1 -11 6144 3702 21 71 0 0 chr2 153935362 153935404 -99321179 + AT_rich Low_complexity Low_complexity 1 42 0 1032 330 50 31 chr2 153936043 153936525 -99320058 - L3 LINE CR1 -905 672 182 2949 231 32 10 chr2 153936753 153937525 -99319058 - L1MC4a LINE L1 -3 7805 7017 365 185 185 7 chr2 153937529 153937543 -99319040 - L1MA10 LINE L1 -3 6331 6318 1111 244 77 33 chr2 153937543 153937973 -99318610 - L1ME1 LINE L1 -9 6157 5709 1049 155 104 78 chr2 153938079 153938343 -99318240 - L1MEc LINE L1 -5184 1212 936 2082 143 0 3 chr2 153938343 153938644 -99317939 - AluSx SINE Alu -12 300 1 1049 155 104 78 chr2 153938644 153938714 -99317869 - L1MEc LINE L1 -5460 936 869 2233 215 38 4 chr2 153938731 153939205 -99317378 - L1MD2 LINE L1 -24 6335 5846 2370 245 100 22 chr2 153939205 153939984 -99316599 - L1MEc LINE L1 -5521 875 36 30 89 0 0 chr2 153940011 153940090 -99316493 + AT_rich Low_complexity Low_complexity 1 79 0 474 265 58 26 chr2 153940266 153940455 -99316128 - L2 LINE L2 -1 3312 3118 328 271 12 0 chr2 153940508 153940593 -99315990 - L1MEc LINE L1 -5749 647 562 447 301 55 59 chr2 153940622 153940841 -99315742 - L2 LINE L2 -340 2974 2757 760 184 50 0 chr2 153941001 153941142 -99315441 + AluJb SINE Alu 1 148 -164 29 0 0 0 chr2 153941174 153941203 -99315380 + AT_rich Low_complexity Low_complexity 1 29 0 977 179 6 0 chr2 153941203 153941359 -99315224 + AluSg/x SINE Alu 127 283 -29 703 299 75 62 chr2 153941626 153942247 -99314336 + L2 LINE L2 2644 3277 -36 438 65 0 0 chr2 153942504 153942566 -99314017 + (TG)n Simple_repeat Simple_repeat 2 63 0 25 0 0 0 chr2 153943237 153943262 -99313321 + AT_rich Low_complexity Low_complexity 1 25 0 1863 184 18 18 chr2 153943885 153944228 -99312355 - MER2 DNA MER2_type -1 343 1 1814 180 6 10 chr2 153944270 153944581 -99312002 + AluJb SINE Alu 3 312 0 285 210 0 0 chr2 153944581 153944643 -99311940 + GA-rich Low_complexity Low_complexity 1 62 0 835 284 64 42 chr2 153944981 153945599 -99310984 - L1ME4a LINE L1 -223 5898 5259 1510 156 0 82 chr2 153945599 153945914 -99310669 - AluJb SINE Alu -23 289 1 835 284 64 42 chr2 153945914 153946018 -99310565 - L1ME4a LINE L1 -862 5259 5159 1684 98 0 20 chr2 153946020 153946275 -99310308 - L1PA15 LINE L1 -6 6159 5910 1055 173 0 16 chr2 153946454 153946645 -99309938 - AluJb SINE Alu -120 192 5 233 295 48 19 chr2 153946752 153946857 -99309726 - HAL1b LINE L1 -475 873 766 6606 60 18 4 chr2 153946869 153947712 -99308871 - L1PA8 LINE L1 -6 6166 5312 * 6961 87 1 36 chr2 153947711 153948900 -99307683 - L1P3 LINE L1 -671 5483 4342 492 270 45 134 chr2 153948944 153949363 -99307220 + L2 LINE L2 2930 3311 -2 262 307 168 30 chr2 153949585 153949787 -99306796 - HAL1 LINE L1 -662 1845 1616 645 235 165 50 chr2 153950092 153950534 -99306049 - HAL1 LINE L1 -892 1615 1123 226 270 110 0 chr2 153950860 153950960 -99305623 - HAL1 LINE L1 -2396 111 1 1220 146 22 90 chr2 153951260 153951582 -99305001 + AluJb SINE Alu 1 300 -2 2079 123 0 17 chr2 153951754 153952054 -99304529 + AluSx SINE Alu 5 299 -13 21 71 0 0 chr2 153953590 153953632 -99302951 + AT_rich Low_complexity Low_complexity 1 42 0 2025 138 0 13 chr2 153953835 153954147 -99302436 + AluSg SINE Alu 1 308 -2 30781 117 9 57 chr2 153954495 153956007 -99300576 + L1PA7 LINE L1 10 1593 -4561 2350 78 0 3 chr2 153956007 153956302 -99300281 - AluY SINE Alu -17 294 1 30781 117 9 57 chr2 153956302 153961253 -99295330 + L1PA7 LINE L1 1593 6154 0 30 27 0 0 chr2 153961255 153961292 -99295291 + AT_rich Low_complexity Low_complexity 1 37 0 3039 207 104 52 chr2 153961395 153962419 -99294164 + L1MC4 LINE L1 6965 8042 0 1626 178 30 0 chr2 153963244 153963549 -99293034 - AluSx SINE Alu 0 319 7 182 274 129 16 chr2 153964715 153964777 -99291806 - L2 LINE L2 -36 3236 3168 24 0 0 0 chr2 153966013 153966037 -99290546 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr2 153966391 153966415 -99290168 + AT_rich Low_complexity Low_complexity 1 24 0 1150 115 175 0 chr2 153966676 153966876 -99289707 + MER46A DNA MER2_type 1 235 -1 330 26 0 0 chr2 153967004 153967043 -99289540 + (CA)n Simple_repeat Simple_repeat 1 39 0 22 0 0 0 chr2 153967627 153967649 -99288934 + AT_rich Low_complexity Low_complexity 1 22 0 242 359 10 10 chr2 153968350 153968453 -99288130 - LTR67 LTR ERVL -419 138 36 848 195 12 18 chr2 153968706 153968870 -99287713 - MER20 DNA MER1_type -1 218 56 399 245 38 19 chr2 153968892 153968998 -99287585 + L1ME3A LINE L1 6026 6133 -37 2577 61 0 0 chr2 153969022 153969333 -99287250 - AluY SINE Alu 0 311 1 350 100 0 0 chr2 153969426 153969476 -99287107 - MLT2A2 LTR ERVL 0 453 404 334 111 70 18 chr2 153969481 153969652 -99286931 + (TA)n Simple_repeat Simple_repeat 1 180 0 197 73 0 73 chr2 153969768 153969809 -99286774 + (TA)n Simple_repeat Simple_repeat 2 39 0 3055 83 30 0 chr2 153969835 153970231 -99286352 - MLT2A2 LTR ERVL -45 408 1 532 269 82 57 chr2 153971676 153972386 -99284197 + L1MEd LINE L1 977 1693 -4436 434 283 123 12 chr2 153972780 153973031 -99283552 + L1MEd LINE L1 2232 2510 -3619 299 270 133 30 chr2 153973064 153973297 -99283286 + L1MEd LINE L1 2633 2889 -3240 38679 38 4 1 chr2 153973370 153978890 -99277693 + L1PA4 LINE L1 620 6155 0 1065 277 109 65 chr2 153978889 153979203 -99277380 + L1MEd LINE L1 3011 3310 -2819 * 2835 3 0 3 chr2 153979203 153979513 -99277070 + AluYa5 SINE Alu 1 309 -2 1065 277 109 65 chr2 153979513 153980911 -99275672 + L1MEd LINE L1 3310 4798 -1331 1415 191 3 21 chr2 153981305 153981588 -99274995 - MLT1B LTR MaLR 0 390 113 4975 158 22 29 chr2 153981613 153981953 -99274630 - L1PA16 LINE L1 -18 6148 5807 342 0 0 0 chr2 153981953 153981991 -99274592 + (TG)n Simple_repeat Simple_repeat 2 39 0 4975 158 22 29 chr2 153981991 153983052 -99273531 - L1PA16 LINE L1 -359 5807 4754 381 171 125 0 chr2 153983056 153983144 -99273439 - MLT1B LTR MaLR -265 125 27 195 162 0 0 chr2 153983158 153983195 -99273388 + (TA)n Simple_repeat Simple_repeat 1 37 0 304 294 0 22 chr2 153983203 153983295 -99273288 + L1MC4 LINE L1 6614 6703 -1339 195 42 0 0 chr2 153983296 153983320 -99273263 + (TA)n Simple_repeat Simple_repeat 1 24 0 1652 154 55 0 chr2 153983321 153983593 -99272990 - AluJb SINE Alu -25 287 1 22 56 0 0 chr2 153983598 153983634 -99272949 + AT_rich Low_complexity Low_complexity 1 36 0 298 344 43 32 chr2 153985069 153985255 -99271328 + MER5A DNA MER1_type 1 188 -1 24 0 0 0 chr2 153985589 153985613 -99270970 + AT_rich Low_complexity Low_complexity 1 24 0 589 275 56 74 chr2 153986886 153987602 -99268981 - L1M4 LINE L1 -2451 3695 2993 694 191 40 0 chr2 153988159 153988311 -99268272 - AluSg/x SINE Alu -11 299 142 3031 161 37 17 chr2 153988559 153989620 -99266963 - L1P4 LINE L1 -361 5804 4735 279 0 0 0 chr2 153989621 153989652 -99266931 + (TG)n Simple_repeat Simple_repeat 2 32 0 264 91 0 0 chr2 153989683 153989727 -99266856 + (GA)n Simple_repeat Simple_repeat 2 45 0 717 94 0 0 chr2 153989835 153989931 -99266652 - AluY SINE Alu -215 96 1 380 117 0 0 chr2 153989932 153989992 -99266591 + L1P3 LINE L1 1550 1609 -4852 490 35 0 0 chr2 153989993 153990051 -99266532 + L1P3 LINE L1 1128 1185 -5276 6292 134 5 9 chr2 153990052 153991119 -99265464 + L1P3 LINE L1 1610 2671 -3790 5260 90 0 0 chr2 153991226 153991967 -99264616 - L1P LINE L1 -3096 3050 2310 243 0 0 0 chr2 153991967 153991994 -99264589 + (T)n Simple_repeat Simple_repeat 1 27 0 693 312 48 12 chr2 153992509 153992759 -99263824 + L2 LINE L2 2174 2432 -882 478 262 71 0 chr2 153992890 153993031 -99263552 + MLT1F LTR MaLR 1 151 -391 2194 99 0 10 chr2 153993031 153993324 -99263259 - AluSg SINE Alu -20 290 1 1801 189 19 14 chr2 153993327 153993698 -99262885 - L1MB7 LINE L1 -51 6133 5761 3472 56 7 5 chr2 153993809 153994255 -99262328 - L1PA7 LINE L1 0 6154 5708 2072 127 0 3 chr2 153994257 153994540 -99262043 - AluSg SINE Alu -28 282 1 1784 208 60 8 chr2 153994540 153994922 -99261661 + MLT1F LTR MaLR 141 542 0 1196 233 107 6 chr2 153994929 153995294 -99261289 + L2 LINE L2 2458 2859 -455 698 173 8 8 chr2 153995789 153995922 -99260661 - AluJo SINE Alu -178 134 2 463 265 43 27 chr2 153996681 153996866 -99259717 - MER112 DNA MER1_type -6 254 67 1529 74 50 5 chr2 153996889 153997091 -99259492 + AluY SINE Alu 101 311 0 1473 199 82 3 chr2 153997152 153997468 -99259115 + MER58B DNA MER1_type 1 341 0 584 252 71 73 chr2 153997665 153998053 -99258530 + LTR16A1 LTR ERVL 82 455 -2 2231 98 3 0 chr2 153999081 153999366 -99257217 - AluSx SINE Alu -26 286 1 2322 71 6 40 chr2 153999502 153999824 -99256759 - AluY SINE Alu 0 311 1 2211 107 3 0 chr2 154000670 154000995 -99255588 - AluSq SINE Alu 0 313 1 394 219 107 64 chr2 154001649 154001836 -99254747 - L1MB7 LINE L1 -484 5637 5446 223 299 58 11 chr2 154002405 154002492 -99254091 + L2 LINE L2 3147 3237 -35 1419 160 256 20 chr2 154002577 154002921 -99253662 + MSTA LTR MaLR 4 428 0 3125 96 18 5 chr2 154003334 154003783 -99252800 + L1PA11 LINE L1 5720 6174 0 742 196 82 2 chr2 154003848 154004041 -99252542 - L1MB7 LINE L1 0 6184 5949 2052 67 117 7 chr2 154004508 154004808 -99251775 - L1MA1 LINE L1 0 6302 5970 2719 198 52 2 chr2 154004847 154005391 -99251192 + MER90 LTR ERV1 1 614 0 1479 150 169 0 chr2 154005579 154005846 -99250737 + AluJb SINE Alu 1 312 0 357 213 53 0 chr2 154005887 154005985 -99250598 + HsTC2 DNA Tc2 2 1898 0 2558 70 0 6 chr2 154006310 154006623 -99249960 - AluY SINE Alu 0 311 1 440 250 138 6 chr2 154007136 154007296 -99249287 + MER5A DNA MER1_type 9 189 0 187 227 0 0 chr2 154008603 154008647 -99247936 - L2 LINE L2 -18 3254 3211 766 208 22 34 chr2 154008754 154008932 -99247651 - MER5B DNA MER1_type -1 177 2 1921 148 0 0 chr2 154009212 154009522 -99247061 + AluSq SINE Alu 13 322 0 2316 109 3 0 chr2 154010841 154011145 -99245438 - AluSx SINE Alu -7 305 1 2425 174 45 5 chr2 154011686 154012135 -99244448 - MLT1C LTR MaLR 0 467 1 550 180 0 0 chr2 154013316 154013416 -99243167 + FLAM_A SINE Alu 37 136 -6 2107 215 60 16 chr2 154014967 154015464 -99241119 - LTR53 LTR ERVL 0 519 1 205 307 48 66 chr2 154015603 154015769 -99240814 + L2 LINE L2 2596 2758 -556 415 141 22 0 chr2 154015980 154016072 -99240511 + CT-rich Low_complexity Low_complexity 1 94 0 984 174 0 0 chr2 154016078 154016233 -99240350 - FRAM SINE Alu -23 153 1 3551 137 11 29 chr2 154016561 154017189 -99239394 - L1MC1 LINE L1 -13 6320 5704 1848 144 45 23 chr2 154017565 154017918 -99238665 + MER46B DNA MER2_type 1 236 0 259 254 262 0 chr2 154017925 154018051 -99238532 - MIR SINE MIR 0 262 104 188 0 74 0 chr2 154018538 154018565 -99238018 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2070 127 7 0 chr2 154018569 154018896 -99237687 + AluSx SINE Alu 1 329 0 653 311 87 19 chr2 154019008 154019330 -99237253 + ERVL LTR ERVL 4212 4555 -1209 1001 271 98 3 chr2 154019452 154019769 -99236814 + LTR16A LTR ERVL 104 450 0 1991 102 27 114 chr2 154020311 154020671 -99235912 + THE1C LTR MaLR 1 322 -53 2220 108 0 0 chr2 154020671 154020959 -99235624 - AluSc SINE Alu -10 299 12 1991 102 27 114 chr2 154020959 154021009 -99235574 + THE1C LTR MaLR 322 375 0 768 260 10 5 chr2 154022874 154023078 -99233505 + MIR SINE MIR 37 241 -21 2199 123 7 3 chr2 154023576 154023878 -99232705 - AluSx SINE Alu -9 303 1 205 253 153 47 chr2 154024153 154024303 -99232280 - L2 LINE L2 -429 2885 2720 411 305 76 46 chr2 154024769 154024966 -99231617 - MIR SINE MIR -3 259 57 1071 167 14 42 chr2 154025402 154025618 -99230965 + MER20 DNA MER1_type 5 214 -5 12524 42 11 8 chr2 154025717 154026665 -99229918 - L1PA5 LINE L1 -3 6151 5207 237 33 0 0 chr2 154026665 154026695 -99229888 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 2196 85 7 7 chr2 154026695 154026978 -99229605 - AluSq SINE Alu -30 283 1 12524 42 11 8 chr2 154026978 154028341 -99228242 - L1PA5 LINE L1 -946 5208 3836 277 238 24 12 chr2 154028820 154028904 -99227679 + MER5A DNA MER1_type 25 109 -80 465 228 108 99 chr2 154031213 154031300 -99225283 + L1ME4a LINE L1 5778 5863 -258 1979 162 0 3 chr2 154031300 154031602 -99224981 - AluJb SINE Alu -11 301 1 465 228 108 99 chr2 154031602 154031848 -99224735 + L1ME4a LINE L1 5863 6114 -7 887 257 152 41 chr2 154032021 154032330 -99224253 + LTR33 LTR ERVL 1 274 -247 1258 190 104 71 chr2 154032330 154032782 -99223801 + MLT1C LTR MaLR 1 467 0 887 257 152 41 chr2 154032782 154032840 -99223743 + LTR33 LTR ERVL 274 324 -197 195 42 0 0 chr2 154032840 154032864 -99223719 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 887 257 152 41 chr2 154032864 154032962 -99223621 + LTR33 LTR ERVL 324 519 -2 547 257 96 12 chr2 154032982 154033326 -99223257 + MLT1L LTR MaLR 84 545 -70 199 289 106 19 chr2 154033671 154033775 -99222808 - L2 LINE L2 -4 3268 3156 1413 188 0 28 chr2 154033791 154034046 -99222537 + AluJo SINE Alu 1 248 -64 414 275 47 13 chr2 154034996 154035145 -99221438 - MER103 DNA DNA 0 166 13 301 258 31 10 chr2 154035788 154035885 -99220698 + MER5A DNA MER1_type 11 109 -80 717 288 150 26 chr2 154035959 154036411 -99220172 - L2 LINE L2 0 3313 2806 1048 132 16 16 chr2 154036422 154036604 -99219979 - MER5A DNA MER1_type -7 182 1 356 286 25 0 chr2 154036604 154036711 -99219872 - L2 LINE L2 -503 2811 2702 1129 341 79 31 chr2 154036737 154038118 -99218465 + L2 LINE L2 157 1679 -1635 285 207 126 0 chr2 154038132 154038219 -99218364 - HAL1 LINE L1 -142 2365 2268 627 277 91 12 chr2 154038231 154038473 -99218110 - HAL1 LINE L1 -291 2216 1956 836 279 97 10 chr2 154038537 154038835 -99217748 - MLT1G LTR MaLR -266 324 1 1847 158 0 38 chr2 154038899 154039215 -99217368 - AluSx SINE Alu -8 304 1 899 198 85 0 chr2 154039522 154039699 -99216884 + MER3 DNA MER1_type 1 192 -17 399 257 18 0 chr2 154039783 154039896 -99216687 - Charlie2a DNA MER1_type -3 2859 2745 * 814 144 58 0 chr2 154039883 154040056 -99216527 - Charlie2a DNA MER1_type -1839 1023 841 669 198 46 51 chr2 154040105 154040228 -99216355 - Charlie2a DNA MER1_type -2356 426 303 2595 7 0 0 chr2 154040228 154040503 -99216080 - AluYb8 SINE Alu -11 307 33 669 198 46 51 chr2 154040503 154040576 -99216007 - Charlie2a DNA MER1_type -2479 303 231 271 326 31 8 chr2 154040603 154040732 -99215851 - Charlie2a DNA MER1_type -2730 132 1 1985 101 4 0 chr2 154041267 154041534 -99215049 + AluSc SINE Alu 42 309 0 700 219 87 16 chr2 154043863 154044046 -99212537 - MLT1C LTR MaLR -271 196 1 216 250 88 38 chr2 154046042 154046122 -99210461 + MIR3 SINE MIR 87 170 -38 537 194 11 155 chr2 154046171 154046378 -99210205 + L1MC5 LINE L1 7605 7740 -221 1753 175 3 10 chr2 154046378 154046675 -99209908 - AluJb SINE Alu -17 295 1 537 194 11 155 chr2 154046675 154046828 -99209755 + L1MC5 LINE L1 7740 7913 -48 226 279 0 16 chr2 154047042 154047103 -99209480 + MLT1L LTR MaLR 140 199 -416 348 310 35 28 chr2 154047208 154047353 -99209230 + MLT1L LTR MaLR 367 512 -103 1902 132 4 0 chr2 154047385 154047657 -99208926 - AluSx SINE Alu 0 312 40 3512 149 52 123 chr2 154048090 154048553 -99208030 + LTR39 LTR ERV1 1 495 -288 841 206 19 0 chr2 154048553 154048708 -99207875 - FRAM SINE Alu -4 162 5 204 40 0 0 chr2 154048718 154048743 -99207840 + (TG)n Simple_repeat Simple_repeat 2 26 0 3512 149 52 123 chr2 154048743 154049111 -99207472 + LTR39 LTR ERV1 504 783 0 445 296 55 25 chr2 154049615 154049814 -99206769 + L2 LINE L2 2553 2757 -557 243 331 72 58 chr2 154049891 154050238 -99206345 + L2 LINE L2 2902 3253 -19 492 91 0 0 chr2 154051045 154051111 -99205472 + AluS SINE Alu 2 67 -246 2072 101 4 0 chr2 154051111 154051379 -99205204 + AluSg SINE Alu 33 301 -9 325 329 82 7 chr2 154053181 154053327 -99203256 + MARNA DNA Mariner 49 205 -381 466 333 88 26 chr2 154054415 154054754 -99201829 - MLT1K LTR MaLR -17 571 212 185 200 36 36 chr2 154055527 154055582 -99201001 - MIR SINE MIR -50 212 158 329 231 33 58 chr2 154055608 154055729 -99200854 - MIR SINE MIR -97 165 48 21 0 0 0 chr2 154056792 154056813 -99199770 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr2 154056813 154056836 -99199747 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2334 121 54 8 chr2 154056875 154057247 -99199336 + MLT1B LTR MaLR 2 390 0 204 275 14 29 chr2 154058051 154058120 -99198463 + L2 LINE L2 3246 3313 0 274 288 0 0 chr2 154058344 154058410 -99198173 + L2 LINE L2 3207 3272 0 504 250 0 0 chr2 154059441 154059617 -99196966 + (CA)n Simple_repeat Simple_repeat 1 176 0 369 233 0 0 chr2 154059630 154059746 -99196837 + (CA)n Simple_repeat Simple_repeat 2 117 0 1289 184 106 63 chr2 154060278 154060626 -99195957 - MLT1B LTR MaLR -17 373 11 205 354 47 47 chr2 154060658 154060850 -99195733 - L2 LINE L2 -572 2742 2551 2756 105 2 17 chr2 154061477 154061887 -99194696 - L1PA10 LINE L1 0 6168 5765 241 111 133 0 chr2 154062479 154062524 -99194059 - MIR3 SINE MIR -48 160 110 805 127 155 7 chr2 154063013 154063155 -99193428 - MLT1B LTR MaLR 0 390 228 246 263 158 47 chr2 154063743 154064124 -99192459 + LTR16A1 LTR ERVL 1 423 -34 481 278 91 45 chr2 154064811 154065009 -99191574 + MIR SINE MIR 35 241 -21 433 281 42 31 chr2 154067864 154068056 -99188527 - MIR SINE MIR -50 212 19 230 299 0 0 chr2 154068566 154068633 -99187950 + Charlie7 DNA MER1_type 10 76 -2536 339 239 52 52 chr2 154068660 154068815 -99187768 + Charlie7 DNA MER1_type 2458 2612 0 599 261 98 9 chr2 154070075 154070290 -99186293 - MIR SINE MIR 0 262 29 2060 142 3 0 chr2 154070720 154071016 -99185567 + AluSx SINE Alu 1 297 -15 492 252 50 7 chr2 154071252 154071391 -99185192 - MIR SINE MIR -65 197 53 406 303 69 61 chr2 154072252 154072789 -99183794 + L2 LINE L2 2645 3272 0 867 213 18 0 chr2 154073363 154073527 -99183056 + MER20 DNA MER1_type 47 213 -6 217 143 0 24 chr2 154075764 154075806 -99180777 + (CA)n Simple_repeat Simple_repeat 2 42 0 21 0 0 0 chr2 154076726 154076747 -99179836 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 154076808 154076836 -99179747 + AT_rich Low_complexity Low_complexity 1 28 0 417 257 132 7 chr2 154078915 154079051 -99177532 + MER63A DNA MER1_type 52 204 -6 34 0 0 0 chr2 154079115 154079149 -99177434 + AT_rich Low_complexity Low_complexity 1 34 0 505 323 60 4 chr2 154079271 154079519 -99177064 + Charlie8 DNA MER1_type 3 264 -2153 734 245 143 36 chr2 154079572 154079935 -99176648 + MLT1J2 LTR MaLR 4 405 -45 329 304 0 0 chr2 154079984 154080063 -99176520 + Charlie8 DNA MER1_type 2337 2415 -2 248 323 0 31 chr2 154080096 154080192 -99176391 + MIR3 SINE MIR 103 195 -13 230 290 21 21 chr2 154081885 154081978 -99174605 + Charlie8 DNA MER1_type 3 95 -2322 24 32 0 0 chr2 154082993 154083024 -99173559 + AT_rich Low_complexity Low_complexity 1 31 0 243 298 9 61 chr2 154083140 154083180 -99173403 - MIR SINE MIR -3 259 218 2688 27 0 3 chr2 154083180 154083480 -99173103 - AluY SINE Alu -12 299 1 243 298 9 61 chr2 154083480 154083553 -99173030 - MIR SINE MIR -44 218 152 428 244 208 0 chr2 154084947 154085115 -99171468 - MIR SINE MIR -13 249 47 193 370 0 0 chr2 154086211 154086284 -99170299 + L2 LINE L2 2987 3059 -213 212 316 61 9 chr2 154086493 154086607 -99169976 + MIR SINE MIR 72 191 -71 21 36 0 0 chr2 154087666 154087694 -99168889 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 154088156 154088178 -99168405 + AT_rich Low_complexity Low_complexity 1 22 0 349 244 84 17 chr2 154088991 154089110 -99167473 + MIR SINE MIR 110 236 -26 23 0 0 0 chr2 154090392 154090415 -99166168 + AT_rich Low_complexity Low_complexity 1 23 0 180 219 0 0 chr2 154090433 154090474 -99166109 - MIR SINE MIR -10 252 212 23 54 0 0 chr2 154090636 154090673 -99165910 + AT_rich Low_complexity Low_complexity 1 37 0 1687 163 7 34 chr2 154091649 154091943 -99164640 - AluJo SINE Alu -22 290 5 1777 98 8 4 chr2 154092322 154092556 -99164027 + AluSq SINE Alu 1 235 -78 299 303 80 17 chr2 154092870 154093045 -99163538 + MIR SINE MIR 6 191 -71 1048 182 0 6 chr2 154093154 154093319 -99163264 - AluJo/FRAM SINE Alu -2 300 137 1422 173 4 9 chr2 154093321 154093552 -99163031 - AluJb SINE Alu -82 230 1 236 217 50 0 chr2 154093674 154093734 -99162849 + L2 LINE L2 3251 3313 0 25 51 0 0 chr2 154093740 154093779 -99162804 + AT_rich Low_complexity Low_complexity 1 39 0 35 41 0 0 chr2 154093866 154093915 -99162668 + AT_rich Low_complexity Low_complexity 1 49 0 2505 58 0 6 chr2 154095965 154096278 -99160305 - AluY SINE Alu 0 311 1 261 313 138 27 chr2 154096872 154097096 -99159487 - MIR SINE MIR -10 252 4 21 36 0 0 chr2 154102025 154102053 -99154530 + AT_rich Low_complexity Low_complexity 1 28 0 340 314 159 39 chr2 154102439 154102980 -99153603 + L2 LINE L2 1070 1675 -1639 402 329 71 60 chr2 154103168 154103618 -99152965 + L2 LINE L2 1302 1756 -1558 401 276 48 14 chr2 154103659 154103804 -99152779 - L1MA9 LINE L1 -39 6273 6124 483 263 88 26 chr2 154103805 154103999 -99152584 + L2 LINE L2 1792 1997 -1317 213 214 0 0 chr2 154104142 154104184 -99152399 + CT-rich Low_complexity Low_complexity 2 43 0 622 292 132 33 chr2 154104371 154105094 -99151489 - L1MC4a LINE L1 -789 5357 5067 26 50 0 0 chr2 154106389 154106429 -99150154 + AT_rich Low_complexity Low_complexity 1 40 0 26 74 0 0 chr2 154108793 154108847 -99147736 + AT_rich Low_complexity Low_complexity 1 54 0 790 275 108 25 chr2 154109010 154109447 -99147136 - L1ME4a LINE L1 -157 5964 5492 387 276 35 69 chr2 154109656 154109830 -99146753 + MER5B DNA MER1_type 3 170 -8 22 80 0 0 chr2 154109939 154109989 -99146594 + AT_rich Low_complexity Low_complexity 1 50 0 230 320 48 7 chr2 154110264 154110411 -99146172 - L1ME LINE L1 -328 5793 5641 22 35 0 0 chr2 154110906 154110935 -99145648 + AT_rich Low_complexity Low_complexity 1 29 0 189 167 70 132 chr2 154111359 154111473 -99145110 - MER5C DNA MER1_type -22 302 196 332 315 0 0 chr2 154111993 154112066 -99144517 + L2 LINE L2 3188 3260 -12 1877 103 92 0 chr2 154112941 154113212 -99143371 - AluSg SINE Alu -11 299 4 392 220 11 22 chr2 154114727 154114818 -99141765 + L2 LINE L2 3220 3309 -4 303 270 117 12 chr2 154114844 154115007 -99141576 - MER112 DNA MER1_type -27 233 54 * 393 254 62 72 chr2 154114997 154115206 -99141377 - MER112 DNA MER1_type -24 236 30 223 386 41 21 chr2 154117464 154117609 -99138974 + MIR3 SINE MIR 22 169 -39 392 339 98 11 chr2 154118511 154118694 -99137889 + MIR SINE MIR 20 218 -44 204 189 38 19 chr2 154123218 154123271 -99133312 + GA-rich Low_complexity Low_complexity 2 55 0 24 77 0 0 chr2 154123315 154123367 -99133216 + AT_rich Low_complexity Low_complexity 1 52 0 229 195 49 0 chr2 154123960 154124001 -99132582 - 5S rRNA rRNA -78 43 1 515 298 79 6 chr2 154124287 154124465 -99132118 + MER117 DNA MER1_type 6 196 -1 188 389 33 0 chr2 154125876 154125966 -99130617 + L2 LINE L2 2961 3053 -219 1459 254 107 45 chr2 154126145 154126519 -99130064 + L1MC4 LINE L1 7270 7692 -350 1573 181 7 48 chr2 154126519 154126829 -99129754 - AluJo SINE Alu -13 299 3 1459 254 107 45 chr2 154126829 154127026 -99129557 + L1MC4 LINE L1 7692 7876 -166 345 180 135 0 chr2 154127027 154127116 -99129467 + L1MC4 LINE L1 7936 8036 -6 2204 113 3 0 chr2 154130275 154130575 -99126008 + AluSx SINE Alu 1 301 -11 21 0 0 0 chr2 154133765 154133786 -99122797 + AT_rich Low_complexity Low_complexity 1 21 0 340 177 51 63 chr2 154134952 154135031 -99121552 - L2 LINE L2 0 3272 3195 1775 168 82 3 chr2 154135036 154135364 -99121219 + MLT1A1 LTR MaLR 1 354 -11 703 202 67 56 chr2 154135918 154136096 -99120487 + MER5A DNA MER1_type 1 180 -9 230 221 52 26 chr2 154136370 154136447 -99120136 - L1ME4a LINE L1 -42 6079 6001 1069 141 30 0 chr2 154136457 154136656 -99119927 + L1 LINE L1 4457 4661 -1485 440 278 31 21 chr2 154137332 154137523 -99119060 - L1ME4a LINE L1 -257 5864 5672 33 0 0 0 chr2 154137763 154137796 -99118787 + AT_rich Low_complexity Low_complexity 1 33 0 198 143 0 0 chr2 154138068 154138103 -99118480 + (TG)n Simple_repeat Simple_repeat 2 36 0 388 267 89 92 chr2 154138221 154138502 -99118081 + L2 LINE L2 3031 3310 -3 1638 160 10 24 chr2 154139001 154139294 -99117289 - AluJb SINE Alu -23 289 1 954 255 53 41 chr2 154140706 154141002 -99115581 + MLT1H LTR MaLR 1 348 -207 575 186 287 16 chr2 154141172 154141360 -99115223 + MIR SINE MIR 6 244 -18 21 57 0 0 chr2 154141456 154141491 -99115092 + AT_rich Low_complexity Low_complexity 1 35 0 241 183 14 28 chr2 154141571 154141642 -99114941 + L1ME4a LINE L1 6048 6117 -4 260 227 73 82 chr2 154141913 154142023 -99114560 + L2 LINE L2 2954 3062 -251 23 68 0 0 chr2 154142943 154142987 -99113596 + AT_rich Low_complexity Low_complexity 1 44 0 860 281 77 26 chr2 154143631 154143944 -99112639 + MER102b DNA MER1_type 13 341 0 255 125 0 0 chr2 154144232 154144272 -99112311 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 1046 87 5 32 chr2 154144273 154144458 -99112125 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 261 0 0 0 chr2 154144875 154144904 -99111679 + (CA)n Simple_repeat Simple_repeat 2 30 0 194 0 0 37 chr2 154145081 154145108 -99111475 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 7214 39 9 2 chr2 154145183 154146367 -99110216 + L1PA5 LINE L1 4963 6152 -2 273 327 58 0 chr2 154146590 154146694 -99109889 - L2 LINE L2 -22 3291 3182 208 247 62 74 chr2 154147363 154147444 -99109139 - MIR SINE MIR -3 259 180 6919 114 23 15 chr2 154147457 154148823 -99107760 - L1MA3 LINE L1 0 6305 4927 344 283 30 10 chr2 154148823 154148922 -99107661 - MIR SINE MIR -68 194 94 335 242 32 40 chr2 154148950 154149074 -99107509 + L2 LINE L2 3097 3219 -94 183 236 55 18 chr2 154149053 154149108 -99107475 - L2 LINE L2 -44 3269 3213 * 250 175 175 31 chr2 154149130 154149227 -99107356 + L2 LINE L2 3201 3311 -2 7556 30 0 1 chr2 154149330 154150401 -99106182 + L1PA4 LINE L1 5084 6154 -1 222 118 216 20 chr2 154151105 154151156 -99105427 + L2 LINE L2 3203 3263 -9 238 380 109 7 chr2 154151185 154151322 -99105261 + MIR3 SINE MIR 8 158 -50 1812 160 17 13 chr2 154151468 154151768 -99104815 + AluJo SINE Alu 2 302 -10 7728 148 45 8 chr2 154152206 154154112 -99102471 + Ricksha_c DNA DNA 9 2046 0 2114 105 16 7 chr2 154154225 154154529 -99102054 + AluSc SINE Alu 1 307 -2 33 0 0 0 chr2 154154699 154154732 -99101851 + AT_rich Low_complexity Low_complexity 1 33 0 2079 118 4 0 chr2 154154834 154155113 -99101470 + AluSx SINE Alu 1 280 -32 255 31 0 0 chr2 154155115 154155147 -99101436 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 5066 227 35 24 chr2 154155637 154157009 -99099574 + L1PA15 LINE L1 1522 2908 -3238 10945 182 32 1 chr2 154157011 154160116 -99096467 + L1PA15 LINE L1 3028 6155 -10 326 289 129 27 chr2 154160787 154161012 -99095571 + L1M4 LINE L1 2383 2630 -3516 656 257 162 0 chr2 154161112 154161322 -99095261 + MIR SINE MIR 3 246 -16 10029 87 1 1 chr2 154161515 154163663 -99092920 - L1PA7 LINE L1 -15 6139 3990 9477 30 1 0 chr2 154163706 154165598 -99090985 - L1PA4 LINE L1 -1 6154 4249 21960 112 9 114 chr2 154165598 154167300 -99089283 - L1PA7 LINE L1 -2134 4012 2134 2535 77 0 0 chr2 154167300 154167611 -99088972 - AluY SINE Alu 0 311 1 21960 112 9 114 chr2 154167611 154170375 -99086208 - L1PA7 LINE L1 -4012 2134 12 195 273 0 0 chr2 154170390 154170434 -99086149 - L2 LINE L2 -2053 1261 1218 1681 158 4 14 chr2 154170483 154170762 -99085821 + AluJb SINE Alu 5 280 -32 432 0 0 0 chr2 154170762 154170810 -99085773 + (CAAAA)n Simple_repeat Simple_repeat 5 52 0 287 209 111 81 chr2 154170899 154171071 -99085512 + L1MC4 LINE L1 7864 8040 -2 398 318 92 38 chr2 154171809 154172150 -99084433 + L1M4 LINE L1 4705 5079 -1067 4206 190 8 17 chr2 154172205 154173144 -99083439 - L1PB3 LINE L1 -1082 5064 4135 * 5017 119 11 61 chr2 154173140 154173368 -99083215 + L1PB3 LINE L1 5079 5317 -981 1772 177 0 0 chr2 154173368 154173679 -99082904 + AluJb SINE Alu 1 311 0 5017 119 11 61 chr2 154173679 154174066 -99082517 + L1PB3 LINE L1 5317 5722 -576 1671 171 0 52 chr2 154174066 154174375 -99082208 + AluJb SINE Alu 1 293 -19 5017 119 11 61 chr2 154174375 154174900 -99081683 + L1PB3 LINE L1 5722 6298 0 13908 224 20 15 chr2 154174966 154179125 -99077458 + L1PA13 LINE L1 1201 5383 -1414 189 94 0 0 chr2 154179125 154179157 -99077426 + (TC)n Simple_repeat Simple_repeat 2 33 0 1703 195 0 0 chr2 154179348 154179630 -99076953 + AluJb SINE Alu 5 286 -26 226 239 0 75 chr2 154179918 154179985 -99076598 + L2 LINE L2 2723 2784 -530 483 138 23 23 chr2 154180409 154180496 -99076087 + Tigger4(Zombi) DNA MER2_type 2645 2731 0 2443 142 23 9 chr2 154180497 154180933 -99075650 + L1MD1 LINE L1 5801 6242 0 2316 187 53 10 chr2 154181590 154182081 -99074502 + L1MB8 LINE L1 5618 6129 -49 303 253 294 0 chr2 154183869 154184015 -99072568 - MIR SINE MIR -21 241 53 27 29 0 0 chr2 154184156 154184190 -99072393 + AT_rich Low_complexity Low_complexity 1 34 0 280 254 0 0 chr2 154184286 154184345 -99072238 - L2 LINE L2 -5 3308 3250 327 310 123 106 chr2 154185082 154185344 -99071239 - L2 LINE L2 -35 3237 2964 1268 173 33 22 chr2 154185344 154185615 -99070968 + ORSL DNA AcHobo 2 275 0 327 310 123 106 chr2 154185615 154185758 -99070825 - L2 LINE L2 -308 2964 2825 1043 196 50 5 chr2 154185839 154186038 -99070545 - AluJo SINE Alu -18 294 87 610 229 93 34 chr2 154186149 154186354 -99070229 + L1MC5 LINE L1 7719 7935 -26 362 255 82 58 chr2 154186568 154186811 -99069772 + L1MC/D LINE L1 5317 5567 -589 308 78 0 0 chr2 154186912 154186963 -99069620 - MER45R DNA AcHobo -611 970 920 315 71 0 0 chr2 154186992 154187034 -99069549 + (TTC)n Simple_repeat Simple_repeat 1 42 0 548 133 22 0 chr2 154187034 154187124 -99069459 - L1MC1 LINE L1 0 6333 6242 2860 88 20 8 chr2 154187124 154187523 -99069060 + MLT2A1 LTR ERVL 1 404 -40 235 230 27 0 chr2 154187524 154187598 -99068985 - L1MC4 LINE L1 -1353 6689 6614 234 250 0 43 chr2 154187549 154187641 -99068942 + L1MC4 LINE L1 6615 6702 -1340 * 296 145 0 32 chr2 154187642 154187704 -99068879 + (TATATG)n Simple_repeat Simple_repeat 6 65 0 313 296 23 0 chr2 154187706 154187794 -99068789 - L1MC4 LINE L1 -1339 6703 6614 * 338 273 23 0 chr2 154187720 154187808 -99068775 + L1MC4 LINE L1 6614 6703 -1339 334 276 23 0 chr2 154187821 154187908 -99068675 + L1MC4 LINE L1 6615 6703 -1339 198 265 0 0 chr2 154187961 154188029 -99068554 + (TATATG)n Simple_repeat Simple_repeat 2 69 0 313 109 0 18 chr2 154188039 154188094 -99068489 + MLT2A2 LTR ERVL 400 453 0 272 180 0 0 chr2 154188480 154188530 -99068053 + L1 LINE L1 4213 4262 -1884 420 287 39 8 chr2 154188630 154188759 -99067824 - MIR SINE MIR -125 137 5 296 406 70 7 chr2 154188798 154189096 -99067487 + L2 LINE L2 2926 3242 -30 462 196 34 68 chr2 154189553 154189606 -99066977 - Charlie1 DNA MER1_type -5 2756 2703 2237 114 3 0 chr2 154189606 154189904 -99066679 + AluSx SINE Alu 1 299 -13 462 196 34 68 chr2 154189904 154189998 -99066585 - Charlie1 DNA MER1_type -58 2703 2614 269 208 9 28 chr2 154190011 154190117 -99066466 + (TA)n Simple_repeat Simple_repeat 1 104 0 1024 170 74 9 chr2 154190125 154190355 -99066228 - Charlie1 DNA MER1_type -396 2365 2121 186 71 0 0 chr2 154191437 154191465 -99065118 + (A)n Simple_repeat Simple_repeat 1 28 0 500 293 88 34 chr2 154191911 154192205 -99064378 + LTR33 LTR ERVL 2 311 -210 422 73 0 0 chr2 154192205 154192260 -99064323 + (TC)n Simple_repeat Simple_repeat 1 55 0 510 276 6 19 chr2 154192892 154193048 -99063535 + L1MEc LINE L1 564 717 -5679 1431 165 4 24 chr2 154193118 154193366 -99063217 - AluJo SINE Alu -69 243 1 575 122 0 0 chr2 154193366 154193456 -99063127 + L1MEc LINE L1 701 790 -5606 321 236 99 25 chr2 154193454 154193615 -99062968 + L1MEc LINE L1 2110 2282 -4114 * 2879 221 110 26 chr2 154193619 154194566 -99062017 + L1MEc LINE L1 2926 3970 -2245 2074 113 0 11 chr2 154194566 154194876 -99061707 + AluSg SINE Alu 3 309 0 2879 221 110 26 chr2 154194876 154194963 -99061620 + L1MEc LINE L1 3970 4048 -2167 213 65 0 0 chr2 154195101 154195132 -99061451 + (TTG)n Simple_repeat Simple_repeat 3 33 0 2108 111 4 0 chr2 154195132 154195412 -99061171 - AluSp SINE Alu -32 281 1 397 287 8 33 chr2 154195431 154195553 -99061030 + MLT1K LTR MaLR 2 120 -468 954 264 56 12 chr2 154195673 154195923 -99060660 + MLT1K LTR MaLR 320 580 -8 781 182 94 12 chr2 154196007 154196177 -99060406 + AluJo SINE Alu 122 305 -7 36 70 0 0 chr2 154196179 154196250 -99060333 + AT_rich Low_complexity Low_complexity 1 71 0 220 280 13 53 chr2 154196961 154197036 -99059547 + MIR3 SINE MIR 119 190 -18 272 172 17 0 chr2 154197036 154197094 -99059489 + (TA)n Simple_repeat Simple_repeat 2 60 0 900 256 119 57 chr2 154197204 154197765 -99058818 - MLT1H1 LTR MaLR 0 555 1 575 281 133 49 chr2 154197766 154198111 -99058472 - LTR33 LTR ERVL -123 398 25 313 253 158 32 chr2 154198590 154198748 -99057835 - MLT1K LTR MaLR -1 587 410 515 339 6 6 chr2 154198751 154198922 -99057661 + MIR SINE MIR 16 186 -76 372 297 91 24 chr2 154199368 154199393 -99057190 + MER5A DNA MER1_type 1 23 -166 2295 96 3 0 chr2 154199393 154199686 -99056897 + AluSp SINE Alu 1 294 -19 372 297 91 24 chr2 154199686 154199825 -99056758 + MER5A DNA MER1_type 23 176 -13 538 263 114 46 chr2 154199887 154200168 -99056415 - L2 LINE L2 0 3313 3014 21 36 0 0 chr2 154200273 154200301 -99056282 + AT_rich Low_complexity Low_complexity 1 28 0 2044 123 17 0 chr2 154200304 154200597 -99055986 - AluSx SINE Alu -14 298 1 1616 197 0 16 chr2 154200722 154201027 -99055556 + AluJo SINE Alu 1 300 -12 2234 165 83 22 chr2 154201181 154201588 -99054995 + MSTB1 LTR MaLR 1 432 0 308 301 57 8 chr2 154204074 154204197 -99052386 - MLT1L LTR MaLR -108 507 379 331 291 21 80 chr2 154204290 154204527 -99052056 - MLT1L LTR MaLR -392 223 1 499 289 103 31 chr2 154204737 154204931 -99051652 + MER63A DNA MER1_type 3 210 0 288 226 183 38 chr2 154204946 154205121 -99051462 - MIR SINE MIR -27 235 37 2374 85 0 0 chr2 154205565 154205860 -99050723 + AluSc SINE Alu 1 295 -14 2241 89 22 28 chr2 154207181 154207505 -99049078 - THE1C LTR MaLR -1 374 53 500 325 47 0 chr2 154208402 154208571 -99048012 - L2 LINE L2 -18 3295 3119 1067 189 56 95 chr2 154208603 154208723 -99047860 + AluJb SINE Alu 28 151 -161 194 0 39 0 chr2 154208723 154208749 -99047834 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1067 189 56 95 chr2 154208749 154208913 -99047670 + AluJb SINE Alu 151 301 -11 409 272 29 44 chr2 154208938 154209016 -99047567 - L2 LINE L2 -211 3061 2984 1191 171 33 9 chr2 154209016 154209227 -99047356 + MER20 DNA MER1_type 1 216 -3 409 272 29 44 chr2 154209227 154209284 -99047299 - L2 LINE L2 -288 2984 2928 194 265 20 0 chr2 154209818 154209867 -99046716 - L2 LINE L2 -111 3161 3112 202 294 7 124 chr2 154210213 154210366 -99046217 - L2 LINE L2 -580 2734 2600 1417 195 42 92 chr2 154211170 154211550 -99045033 - MLT1A1 LTR MaLR -4 361 1 222 283 159 28 chr2 154211582 154211727 -99044856 - MIR SINE MIR -46 216 53 5880 87 34 0 chr2 154211844 154212670 -99043913 - L1PB1 LINE L1 -4 6147 5294 1779 159 0 28 chr2 154213260 154213580 -99043003 + AluJo SINE Alu 1 311 -1 3581 151 48 6 chr2 154213970 154214481 -99042102 + L1MB2 LINE L1 5256 5798 -385 2568 56 0 13 chr2 154214481 154214786 -99041797 - AluY SINE Alu -10 301 1 3581 151 48 6 chr2 154214786 154214953 -99041630 + L1MB2 LINE L1 5798 5957 -226 1074 137 17 0 chr2 154214959 154215134 -99041449 + L1MB2 LINE L1 5994 6171 0 1981 131 42 0 chr2 154215347 154215630 -99040953 - AluSx SINE Alu -17 295 1 294 326 84 0 chr2 154215735 154215830 -99040753 + L2 LINE L2 3166 3268 -4 23 0 0 0 chr2 154215976 154215999 -99040584 + AT_rich Low_complexity Low_complexity 1 23 0 2052 125 14 0 chr2 154216123 154216404 -99040179 - AluSx SINE Alu -27 285 1 238 340 118 14 chr2 154216710 154216854 -99039729 - MIR3 SINE MIR -14 194 36 198 71 0 0 chr2 154217378 154217406 -99039177 + (A)n Simple_repeat Simple_repeat 1 28 0 248 301 18 0 chr2 154217409 154217510 -99039073 + GA-rich Low_complexity Low_complexity 2 169 0 283 291 25 13 chr2 154217545 154217624 -99038959 + MER5A DNA MER1_type 40 119 -70 2449 79 0 10 chr2 154217902 154218207 -99038376 - AluY SINE Alu -9 302 1 437 260 27 11 chr2 154219058 154219200 -99037383 - MER20B DNA MER1_type -4 215 69 366 294 70 7 chr2 154219359 154219502 -99037081 + MLT2C1 LTR ERVL 44 195 -202 * 2124 195 30 51 chr2 154219403 154219895 -99036688 + MLT1E2 LTR MaLR 88 569 -57 227 305 232 12 chr2 154219901 154220065 -99036518 - L3 LINE CR1 -188 1389 1190 180 0 0 0 chr2 154220835 154220855 -99035728 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 258 324 9 48 chr2 154221205 154221310 -99035273 + MER5A DNA MER1_type 7 107 -82 892 186 82 16 chr2 154221327 154221521 -99035062 - L1ME2 LINE L1 0 6164 5958 770 186 23 47 chr2 154221524 154221696 -99034887 - L1ME2 LINE L1 -263 5903 5736 2259 210 111 22 chr2 154221697 154221764 -99034819 - MLT1E LTR MaLR 0 593 533 1366 148 58 5 chr2 154221764 154221987 -99034596 - MER46A DNA MER2_type 0 236 2 2259 210 111 22 chr2 154221987 154222461 -99034122 - MLT1E LTR MaLR -60 533 4 1312 218 4 11 chr2 154222481 154222747 -99033836 - L1ME2 LINE L1 -455 5709 5446 396 301 33 44 chr2 154222857 154223040 -99033543 + MER5A DNA MER1_type 9 189 0 360 269 85 7 chr2 154223197 154223338 -99033245 - L1MC/D LINE L1 -2062 5746 5595 2372 68 0 32 chr2 154223758 154224066 -99032517 - AluY SINE Alu -13 298 1 280 280 19 13 chr2 154224824 154224937 -99031646 - MIR SINE MIR -84 124 13 229 303 76 0 chr2 154226266 154226332 -99030251 - L2 LINE L2 0 3313 3243 617 252 14 0 chr2 154226548 154226687 -99029896 - MER63A DNA MER1_type 0 210 70 1587 160 12 75 chr2 154227814 154228145 -99028438 + AluJo SINE Alu 1 310 -2 394 293 207 0 chr2 154228436 154228600 -99027983 + MARNA DNA Mariner 28 225 -361 201 176 0 0 chr2 154228614 154228648 -99027935 + A-rich Low_complexity Low_complexity 1 34 0 439 293 83 6 chr2 154229598 154229755 -99026828 - MIR SINE MIR -10 252 84 2510 69 0 3 chr2 154229819 154230124 -99026459 - AluY SINE Alu -7 304 1 38 51 0 0 chr2 154232704 154232763 -99023820 + AT_rich Low_complexity Low_complexity 1 59 0 2397 98 13 0 chr2 154232824 154233130 -99023453 + AluSg SINE Alu 1 310 0 356 275 88 0 chr2 154234889 154234980 -99021603 - L2 LINE L2 -6 3266 3168 304 271 130 40 chr2 154235107 154235275 -99021308 + MIR3 SINE MIR 2 190 -66 320 337 0 0 chr2 154235768 154235866 -99020717 + GA-rich Low_complexity Low_complexity 3 100 0 302 274 117 89 chr2 154237144 154237494 -99019089 - L1M2 LINE L1 -5612 1237 878 30 0 0 0 chr2 154237495 154237525 -99019058 + GC_rich Low_complexity Low_complexity 1 30 0 182 250 14 0 chr2 154238980 154239052 -99017531 + (TA)n Simple_repeat Simple_repeat 1 73 0 2289 82 0 13 chr2 154239346 154239649 -99016934 + AluSg SINE Alu 1 299 -11 427 247 32 44 chr2 154239955 154240113 -99016470 + L1M4 LINE L1 4228 4383 -1763 792 167 37 25 chr2 154240670 154240832 -99015751 - MER5A DNA MER1_type -23 166 3 646 161 127 81 chr2 154240870 154241060 -99015523 + MER5C DNA MER1_type 74 279 -45 1661 176 0 19 chr2 154241060 154241367 -99015216 + AluJo SINE Alu 1 301 -11 646 161 127 81 chr2 154241367 154241412 -99015171 + MER5C DNA MER1_type 279 320 -4 22 0 0 0 chr2 154241686 154241708 -99014875 + AT_rich Low_complexity Low_complexity 1 22 0 326 229 25 0 chr2 154242350 154242419 -99014164 - MER5A DNA MER1_type -86 103 17 1113 201 250 57 chr2 154242475 154242987 -99013596 + L1ME2 LINE L1 5551 6161 -5 1821 161 3 0 chr2 154242995 154243287 -99013296 - AluJb SINE Alu -19 293 1 1986 133 11 4 chr2 154243542 154243821 -99012762 + MER1B DNA MER1_type 59 339 0 252 0 0 0 chr2 154243883 154243911 -99012672 + (A)n Simple_repeat Simple_repeat 1 28 0 2214 84 21 7 chr2 154243986 154244315 -99012268 + AluY SINE Alu 1 311 0 7552 37 5 0 chr2 154244676 154245571 -99011012 - L1PA4 LINE L1 -3 6152 5254 524 270 124 80 chr2 154245564 154246486 -99010097 + L1ME4a LINE L1 3745 4706 -1440 * 227 267 50 0 chr2 154246717 154246777 -99009806 + L1ME4a LINE L1 4878 4940 -1206 347 222 68 80 chr2 154247327 154247503 -99009080 + L1ME4a LINE L1 5937 6110 -11 663 211 89 0 chr2 154247775 154247898 -99008685 - AluJo SINE Alu -176 136 3 368 225 63 27 chr2 154248758 154248869 -99007714 - MER112 DNA MER1_type -1 259 145 225 0 0 0 chr2 154248871 154248896 -99007687 + (TA)n Simple_repeat Simple_repeat 1 25 0 3147 194 41 11 chr2 154248908 154249542 -99007041 - MER82 DNA MER2_type 0 653 1 207 0 0 0 chr2 154249596 154249619 -99006964 + (CA)n Simple_repeat Simple_repeat 2 24 0 273 311 59 34 chr2 154249770 154249889 -99006694 - MER5B DNA MER1_type -54 124 3 966 202 22 6 chr2 154249909 154250092 -99006491 + MER5A DNA MER1_type 4 189 0 310 246 109 22 chr2 154250792 154250930 -99005653 - L2 LINE L2 -3 3310 3161 216 0 0 0 chr2 154251478 154251502 -99005081 + (CA)n Simple_repeat Simple_repeat 1 24 0 732 198 254 0 chr2 154251825 154252042 -99004541 + Charlie4a DNA MER1_type 21 292 -216 615 170 227 10 chr2 154252022 154252216 -99004367 + Charlie4a DNA MER1_type 273 508 0 * 1304 173 0 36 chr2 154252820 154253068 -99003515 - AluJo SINE Alu -11 301 63 2284 98 0 7 chr2 154253258 154253565 -99003018 + AluSc SINE Alu 1 305 -4 374 248 80 18 chr2 154253590 154253703 -99002880 - MIR SINE MIR -115 147 28 384 297 40 0 chr2 154254906 154255007 -99001576 - MIR3 SINE MIR -21 187 83 349 274 71 18 chr2 154255451 154255564 -99001019 - MIR3 SINE MIR -9 199 81 * 485 329 65 26 chr2 154255526 154255757 -99000826 + MIR SINE MIR 8 247 -15 189 298 53 0 chr2 154255788 154255845 -99000738 - MIR SINE MIR -74 134 75 297 284 49 0 chr2 154256027 154256108 -99000475 - L2 LINE L2 0 3313 3229 534 256 15 29 chr2 154257293 154257430 -98999153 - L2 LINE L2 -7 3306 3172 251 275 282 14 chr2 154257755 154257897 -98998686 + MIR SINE MIR 8 187 -75 1375 219 112 15 chr2 154257897 154258307 -98998276 + L1ME1 LINE L1 5713 6162 -4 329 272 0 0 chr2 154258321 154258402 -98998181 + MIR SINE MIR 180 260 -2 198 375 18 0 chr2 154259388 154259444 -98997139 + MIR SINE MIR 17 73 -135 2272 97 3 7 chr2 154259575 154259885 -98996698 + AluSc SINE Alu 1 309 0 1913 137 7 3 chr2 154259898 154260198 -98996385 + AluSx SINE Alu 1 301 -11 1303 223 61 61 chr2 154260376 154260820 -98995763 - L1MEc LINE L1 -5894 502 59 682 208 0 0 chr2 154260842 154260991 -98995592 - L1MB7 LINE L1 -19 6165 6017 430 218 109 57 chr2 154260998 154261209 -98995374 - L1MC4a LINE L1 -1561 6247 6026 1121 189 117 8 chr2 154261216 154261464 -98995119 - AluJo SINE Alu -37 275 1 487 270 36 103 chr2 154261605 154261812 -98994771 - L1 LINE L1 -3569 2577 2399 2131 123 0 10 chr2 154261812 154262104 -98994479 + AluSx SINE Alu 1 289 -23 487 270 36 103 chr2 154262104 154262226 -98994357 - L1 LINE L1 -3747 2399 2270 660 167 0 8 chr2 154262488 154262614 -98993969 - L1M4c LINE L1 -2553 3829 3705 856 239 34 15 chr2 154262636 154262899 -98993684 - L1M4c LINE L1 -3700 2682 2415 3012 240 75 28 chr2 154262903 154264059 -98992524 - L1M4c LINE L1 -4094 2290 1039 2120 127 0 7 chr2 154264059 154264366 -98992217 - AluSx SINE Alu -7 305 1 3012 240 75 28 chr2 154264366 154264643 -98991940 - L1M4c LINE L1 -5345 1039 777 353 294 157 78 chr2 154264789 154265388 -98991195 - L1 LINE L1 -5235 656 11 23 68 0 0 chr2 154266898 154266942 -98989641 + AT_rich Low_complexity Low_complexity 1 44 0 369 207 166 53 chr2 154266942 154267111 -98989472 - L1ME4a LINE L1 -9 6112 5925 255 31 0 0 chr2 154267258 154267290 -98989293 + (TC)n Simple_repeat Simple_repeat 2 33 0 1123 195 0 5 chr2 154267879 154268064 -98988519 + AluJo SINE Alu 7 190 -122 4441 109 106 97 chr2 154268067 154269432 -98987151 - pTR5 LTR ERV1 0 2438 743 546 226 0 0 chr2 154269432 154269538 -98987045 + AluJo SINE Alu 187 292 -20 24 0 0 0 chr2 154269844 154269868 -98986715 + AT_rich Low_complexity Low_complexity 1 24 0 1590 186 3 20 chr2 154270129 154270425 -98986158 - AluJo SINE Alu -20 292 2 318 390 81 39 chr2 154270588 154270898 -98985685 + L2 LINE L2 2924 3246 -26 295 145 121 84 chr2 154271565 154271648 -98984935 - L2 LINE L2 -50 3222 3137 189 94 0 0 chr2 154272177 154272209 -98984374 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 5244 54 0 1 chr2 154272209 154272856 -98983727 - L1PA6 LINE L1 -9 6145 5500 5866 116 53 12 chr2 154273564 154273751 -98982832 - L1PB1 LINE L1 0 6151 5973 2048 111 0 17 chr2 154273751 154274048 -98982535 - AluSc SINE Alu -17 292 1 5866 116 53 12 chr2 154274048 154275021 -98981562 - L1PB1 LINE L1 -178 5973 4936 653 319 60 20 chr2 154275222 154275855 -98980728 - L1ME LINE L1 -511 5659 5001 10262 124 59 17 chr2 154275856 154275960 -98980623 - Tigger1 DNA MER2_type -14 2404 2306 2368 77 0 22 chr2 154275960 154276273 -98980310 + AluY SINE Alu 1 306 -5 10262 124 59 17 chr2 154276273 154277892 -98978691 - Tigger1 DNA MER2_type -112 2306 610 3529 40 0 5 chr2 154278624 154279054 -98977529 + L1PA4 LINE L1 5725 6152 -3 244 292 28 0 chr2 154279111 154279183 -98977400 + MIR SINE MIR 64 137 -125 610 272 43 82 chr2 154279226 154279531 -98977052 - L2 LINE L2 0 3313 3021 531 300 103 48 chr2 154279563 154279664 -98976919 - L2 LINE L2 -411 2903 2809 2260 71 10 7 chr2 154279664 154279958 -98976625 - AluY SINE Alu -16 295 1 531 300 103 48 chr2 154279958 154280166 -98976417 - L2 LINE L2 -505 2809 2577 2131 125 7 0 chr2 154281145 154281441 -98975142 - AluSx SINE Alu -10 302 5 277 330 0 21 chr2 154281870 154281964 -98974619 + MER5A DNA MER1_type 91 182 -7 424 286 95 78 chr2 154282054 154282348 -98974235 - L1MEd LINE L1 -5474 645 347 297 183 14 0 chr2 154282407 154282478 -98974105 + HsTC2 DNA Tc2 1823 1894 -4 432 306 70 32 chr2 154282783 154282940 -98973643 + L2 LINE L2 3106 3268 -4 22 80 0 0 chr2 154283334 154283384 -98973199 + AT_rich Low_complexity Low_complexity 1 50 0 196 382 81 8 chr2 154284039 154284162 -98972421 + L2 LINE L2 3126 3257 -15 284 202 141 71 chr2 154284450 154284549 -98972034 + L2 LINE L2 3208 3313 0 1852 122 0 45 chr2 154285267 154285555 -98971028 - AluSx SINE Alu -32 280 6 747 212 0 0 chr2 154286649 154286781 -98969802 + FLAM_C SINE Alu 1 132 -1 461 301 131 18 chr2 154287459 154287688 -98968895 - MIR SINE MIR -6 256 2 2444 79 7 0 chr2 154288839 154289142 -98967441 + AluSg SINE Alu 1 305 -5 21 0 0 0 chr2 154289313 154289334 -98967249 + AT_rich Low_complexity Low_complexity 1 21 0 6466 211 82 32 chr2 154289636 154292625 -98963958 - L1MC2 LINE L1 0 6344 3208 208 283 17 17 chr2 154292855 154292915 -98963668 - MIR3 SINE MIR -3 205 146 203 261 0 87 chr2 154292943 154293035 -98963548 + MER5A DNA MER1_type 69 152 -37 225 71 0 0 chr2 154293042 154293070 -98963513 - L1M3 LINE L1 -525 5658 5631 1243 73 58 26 chr2 154293241 154293432 -98963151 - MER30 DNA MER1_type -33 197 1 1607 180 11 18 chr2 154294027 154294305 -98962278 - AluJb SINE Alu -27 285 10 3478 159 82 3 chr2 154294340 154295026 -98961557 + L1MB3 LINE L1 5442 6181 -2 216 97 0 0 chr2 154295373 154295404 -98961179 + (T)n Simple_repeat Simple_repeat 1 31 0 381 208 62 49 chr2 154295528 154295672 -98960911 - L1MC5 LINE L1 -184 7777 7632 666 93 0 0 chr2 154295855 154295941 -98960642 + L1PA5 LINE L1 11 96 -6050 31980 64 3 6 chr2 154295941 154301389 -98955194 + L1PA5 LINE L1 623 6052 -102 2693 231 55 16 chr2 154301463 154302711 -98953872 - L1MCa LINE L1 -2879 3547 2252 234 81 0 0 chr2 154302711 154302748 -98953835 + (TG)n Simple_repeat Simple_repeat 2 38 0 799 145 21 0 chr2 154302748 154302893 -98953690 - L1MCa LINE L1 -4206 2220 2073 4795 129 163 23 chr2 154302917 154303091 -98953492 + Tigger3b DNA MER2_type 6 154 -2874 1585 212 24 0 chr2 154303091 154303383 -98953200 + AluJo SINE Alu 1 299 -13 4795 129 163 23 chr2 154303383 154303396 -98953187 + Tigger3b DNA MER2_type 154 164 -2864 655 105 73 48 chr2 154303396 154303520 -98953063 + FLAM_C SINE Alu 2 128 -5 4795 129 163 23 chr2 154303520 154304384 -98952199 + Tigger3b DNA MER2_type 164 1206 -25 21338 170 17 43 chr2 154304386 154305507 -98951076 - L1PA11 LINE L1 -16 7596 6448 2321 111 0 0 chr2 154305507 154305814 -98950769 - AluY SINE Alu -4 307 1 21338 170 17 43 chr2 154305814 154311419 -98945164 - L1PA11 LINE L1 -1164 6448 7 4884 155 138 34 chr2 154311482 154312797 -98943786 - L1MCa LINE L1 -4401 2025 575 305 208 28 0 chr2 154312802 154312874 -98943709 - L1MCa LINE L1 -5811 615 542 * 4941 112 20 8 chr2 154312866 154313671 -98942912 + L1PA15 LINE L1 5349 6163 -2 1957 170 95 48 chr2 154313670 154314175 -98942408 - L1MCa LINE L1 -5880 546 18 * 294 253 192 25 chr2 154314434 154314632 -98941951 - MARNA DNA Mariner -208 378 148 33 56 0 0 chr2 154314684 154314738 -98941845 + AT_rich Low_complexity Low_complexity 1 54 0 704 87 94 14 chr2 154314748 154314886 -98941697 - L1MA5A LINE L1 -6 6291 6143 378 138 0 0 chr2 154314888 154314953 -98941630 - L1MA5A LINE L1 -210 6087 6023 1161 228 85 74 chr2 154315710 154316262 -98940321 - L1MC4 LINE L1 -5 8037 7480 839 133 73 52 chr2 154316272 154316505 -98940078 - L1MB2 LINE L1 0 6171 5934 1338 282 67 21 chr2 154316612 154316754 -98939829 + L1M4c LINE L1 1183 1317 -5067 2370 53 0 3 chr2 154316754 154317066 -98939517 + AluY SINE Alu 1 311 0 1338 282 67 21 chr2 154317066 154317550 -98939033 + L1M4c LINE L1 1317 1839 -4545 1749 193 0 3 chr2 154317708 154317998 -98938585 + AluJo SINE Alu 17 305 -7 355 266 29 87 chr2 154318000 154318241 -98938342 + L1M4c LINE L1 1910 2136 -4427 746 257 51 3 chr2 154318330 154318678 -98937905 + L1M4c LINE L1 3372 3736 -2646 * 914 166 6 0 chr2 154318645 154318826 -98937757 + L1MB8 LINE L1 6023 6204 -210 2485 90 0 0 chr2 154318826 154319137 -98937446 + AluSq SINE Alu 1 311 -2 942 172 18 41 chr2 154319186 154319407 -98937176 + L1MB8 LINE L1 6190 6405 -9 547 259 127 69 chr2 154319880 154320457 -98936126 - L2 LINE L2 0 3313 2690 1675 114 14 4 chr2 154320457 154320738 -98935845 + L1MA4 LINE L1 6002 6285 -15 547 259 127 69 chr2 154320738 154320794 -98935789 - L2 LINE L2 -623 2690 2639 1311 193 82 97 chr2 154320794 154321260 -98935323 + MLT1C LTR MaLR 1 459 -8 221 345 0 0 chr2 154321330 154321414 -98935169 - L2 LINE L2 -764 2550 2467 2032 143 13 0 chr2 154321645 154321953 -98934630 + AluSq SINE Alu 1 312 -1 747 193 0 17 chr2 154321959 154322140 -98934443 + GA-rich Low_complexity Low_complexity 1 178 0 2657 184 68 36 chr2 154322240 154322360 -98934223 - L1M4 LINE L1 -5123 1732 1617 1946 143 3 32 chr2 154322360 154322675 -98933908 + AluSx SINE Alu 1 306 -6 2657 184 68 36 chr2 154322675 154323120 -98933463 - L1M4 LINE L1 -5238 1617 1142 2270 96 0 10 chr2 154323120 154323421 -98933162 - AluSq SINE Alu -15 298 1 2657 184 68 36 chr2 154323421 154323588 -98932995 - L1M4 LINE L1 -5713 1142 982 4824 160 6 25 chr2 154323760 154324736 -98931847 - L1MB3 LINE L1 -2 6181 5219 24 0 0 0 chr2 154324736 154324760 -98931823 + AT_rich Low_complexity Low_complexity 1 24 0 10832 187 42 42 chr2 154324762 154324804 -98931779 - L1PA16 LINE L1 -9 6393 6353 225 0 0 0 chr2 154324804 154324829 -98931754 + (TG)n Simple_repeat Simple_repeat 2 26 0 10832 187 42 42 chr2 154324829 154326358 -98930225 - L1PA16 LINE L1 -49 6353 4827 1850 161 10 0 chr2 154326358 154326657 -98929926 - AluJb SINE Alu -10 302 1 10832 187 42 42 chr2 154326657 154326737 -98929846 - L1PA16 LINE L1 -1575 4827 4749 1553 184 0 15 chr2 154326737 154327008 -98929575 - AluJb SINE Alu -16 296 30 10832 187 42 42 chr2 154327008 154328751 -98927832 - L1PA16 LINE L1 -1653 4749 3009 1913 90 0 0 chr2 154328751 154328984 -98927599 + AluSx SINE Alu 60 292 -20 10832 187 42 42 chr2 154328984 154330304 -98926279 - L1PA16 LINE L1 -3393 3009 1692 2063 127 10 3 chr2 154330304 154330612 -98925971 - AluSg SINE Alu 0 310 1 10832 187 42 42 chr2 154330612 154331609 -98924974 - L1PA16 LINE L1 -4710 1692 648 200 59 29 0 chr2 154331609 154331643 -98924940 + (TTTTA)n Simple_repeat Simple_repeat 4 38 0 10832 187 42 42 chr2 154331643 154332275 -98924308 - L1PA16 LINE L1 -5754 648 18 546 140 131 0 chr2 154332274 154332381 -98924202 - L1M4 LINE L1 -5885 974 854 * 2430 243 140 15 chr2 154332398 154333113 -98923470 - L1M4 LINE L1 -6054 805 2 621 254 104 93 chr2 154333208 154333669 -98922914 + MLT1J LTR MaLR 1 466 -45 3202 75 41 7 chr2 154334830 154335267 -98921316 + MLT2A2 LTR ERVL 2 453 0 1011 227 29 17 chr2 154335267 154335505 -98921078 - MIR SINE MIR -3 259 19 2028 182 20 0 chr2 154335568 154335926 -98920657 - MLT1A1 LTR MaLR 0 365 1 313 398 29 25 chr2 154335975 154336219 -98920364 - L1M4 LINE L1 -1800 4346 4102 252 0 0 0 chr2 154336581 154336609 -98919974 + (TG)n Simple_repeat Simple_repeat 1 56 0 252 0 0 0 chr2 154336609 154336637 -98919946 + (TG)n Simple_repeat Simple_repeat 2 29 0 551 298 47 12 chr2 154336933 154337104 -98919479 + L2 LINE L2 3089 3265 -7 626 230 77 45 chr2 154337401 154337623 -98918960 + LTR16A1 LTR ERVL 5 233 -224 1477 175 23 96 chr2 154337627 154338021 -98918562 + MLT1A1 LTR MaLR 1 365 0 241 168 218 10 chr2 154338063 154338164 -98918419 + LTR16A1 LTR ERVL 336 457 0 217 229 21 0 chr2 154338821 154338869 -98917714 + L2 LINE L2 3179 3227 -86 5889 174 17 16 chr2 154339148 154341226 -98915357 + L1PA13 LINE L1 4088 6158 -5 396 155 0 0 chr2 154341359 154341430 -98915153 + CT-rich Low_complexity Low_complexity 2 72 0 1265 217 98 17 chr2 154341482 154341828 -98914755 - MLT1A2 LTR MaLR 0 374 1 451 237 183 67 chr2 154341846 154342218 -98914365 + MLT1H LTR MaLR 133 547 -2 926 266 39 0 chr2 154342336 154342592 -98913991 + L2 LINE L2 3048 3313 0 1309 128 186 21 chr2 154343101 154343228 -98913355 + AluJb SINE Alu 1 106 -221 2337 77 30 0 chr2 154343228 154343527 -98913056 + AluY SINE Alu 1 308 -3 1309 128 186 21 chr2 154343527 154343686 -98912897 + AluJb SINE Alu 106 327 0 2937 153 42 30 chr2 154344105 154344708 -98911875 - L1MB2 LINE L1 -203 5968 5359 269 154 0 0 chr2 154344776 154344828 -98911755 - L1MB2 LINE L1 -978 5366 5315 234 81 0 0 chr2 154344851 154344888 -98911695 + (T)n Simple_repeat Simple_repeat 1 37 0 2451 193 14 7 chr2 154344890 154345461 -98911122 - L1MB2 LINE L1 -843 5303 4729 782 219 5 18 chr2 154346093 154346366 -98910217 - AluJb SINE Alu -11 301 1 442 251 123 58 chr2 154346419 154346570 -98910013 - L1MC4a LINE L1 -1922 5886 5746 1430 194 56 4 chr2 154346570 154346838 -98909745 + AluJb SINE Alu 1 282 -30 442 251 123 58 chr2 154346838 154346859 -98909724 - L1MC4a LINE L1 -2062 5746 5728 2649 52 0 0 chr2 154346859 154347166 -98909417 + AluY SINE Alu 1 307 -4 442 251 123 58 chr2 154347166 154347423 -98909160 - L1MC4a LINE L1 -2080 5728 5428 556 169 141 60 chr2 154347426 154347610 -98908973 - L1MD3 LINE L1 0 7995 7797 328 242 62 23 chr2 154347610 154347738 -98908845 - L1MC4a LINE L1 -2369 5439 5307 810 207 118 0 chr2 154348575 154348744 -98907839 + MER5A DNA MER1_type 1 189 0 2164 113 3 0 chr2 154349518 154349810 -98906773 - AluSq SINE Alu -20 293 1 2303 117 0 0 chr2 154350482 154350789 -98905794 - AluSx SINE Alu -5 307 1 180 0 0 0 chr2 154351055 154351075 -98905508 + (T)n Simple_repeat Simple_repeat 1 20 0 376 256 8 32 chr2 154351441 154351566 -98905017 - MER58C DNA MER1_type -1 214 93 1804 138 30 3 chr2 154351594 154351898 -98904685 - AluJo SINE Alu 0 312 1 353 190 7 139 chr2 154351899 154352036 -98904547 - MER58C DNA MER1_type -96 119 1 302 317 57 0 chr2 154352692 154352815 -98903768 - MIR SINE MIR 0 262 133 1432 133 57 51 chr2 154352817 154353132 -98903451 - L1MD2 LINE L1 -387 5972 5656 889 248 169 41 chr2 154353141 154353609 -98902974 - L1MC/D LINE L1 -368 5794 5265 362 228 107 114 chr2 154353604 154354052 -98902531 - L1MC5 LINE L1 -14 7947 7503 * 831 194 51 20 chr2 154354052 154354248 -98902335 + L1MC5 LINE L1 7037 7238 -723 634 271 122 54 chr2 154354344 154354769 -98901814 - L1MC5 LINE L1 -827 6981 6528 1624 190 14 7 chr2 154354925 154355220 -98901363 + AluJb SINE Alu 1 297 -15 239 266 11 43 chr2 154355417 154355511 -98901072 - L1MC4a LINE L1 -1651 6157 6067 233 362 33 41 chr2 154355552 154355795 -98900788 - HAL1 LINE L1 -1884 623 383 1615 102 18 0 chr2 154355816 154356042 -98900541 + MER30 DNA MER1_type 1 230 0 351 302 145 51 chr2 154356044 154356230 -98900353 - HAL1 LINE L1 -2226 281 63 210 37 0 0 chr2 154356230 154356257 -98900326 + (CAA)n Simple_repeat Simple_repeat 2 28 0 351 302 145 51 chr2 154356257 154356325 -98900258 - HAL1 LINE L1 -2444 63 3 357 159 0 0 chr2 154357902 154357965 -98898618 + T-rich Low_complexity Low_complexity 1 63 0 318 261 57 0 chr2 154359338 154359426 -98897157 + MIR SINE MIR 143 235 -27 359 304 92 37 chr2 154360029 154360378 -98896205 - L1MC4a LINE L1 -1846 5962 5595 1578 136 6 107 chr2 154360574 154360912 -98895671 + AluJb SINE Alu 1 304 -8 406 303 25 25 chr2 154362343 154362505 -98894078 + L1ME4a LINE L1 5540 5701 -420 757 249 69 20 chr2 154362528 154362833 -98893750 + L1ME4a LINE L1 5795 6114 -7 250 287 57 33 chr2 154363496 154363618 -98892965 - L2 LINE L2 -39 3274 3150 21 0 0 0 chr2 154364110 154364131 -98892452 + AT_rich Low_complexity Low_complexity 1 21 0 274 311 135 45 chr2 154364137 154364449 -98892134 + L2 LINE L2 2033 2372 -942 832 231 40 94 chr2 154364649 154365073 -98891510 + L1MC4 LINE L1 7628 8028 -14 306 349 117 16 chr2 154365575 154365824 -98890759 + L2 LINE L2 1711 1984 -1330 1706 115 111 124 chr2 154366054 154366488 -98890095 + MSTA LTR MaLR 1 428 0 2086 130 28 11 chr2 154366619 154366974 -98889609 - MER46B DNA MER2_type 0 236 1 204 297 143 0 chr2 154367122 154367213 -98889370 + L2 LINE L2 2864 2967 -305 499 196 272 19 chr2 154367350 154367508 -98889075 + LTR67 LTR ERVL 360 557 0 21 71 0 0 chr2 154369306 154369348 -98887235 + AT_rich Low_complexity Low_complexity 1 42 0 517 162 126 18 chr2 154369632 154369743 -98886840 - FLAM_A SINE Alu -10 123 1 393 376 43 5 chr2 154371820 154372030 -98884553 - L3 LINE CR1 -13 1564 1347 322 109 0 0 chr2 154372498 154372544 -98884039 - tRNA-Arg-CGC tRNA tRNA -30 46 1 1603 126 126 0 chr2 154373703 154373977 -98882606 + MER7A DNA MER2_type 6 314 -32 802 160 0 0 chr2 154373995 154374120 -98882463 - FLAM_C SINE Alu -8 125 1 3617 226 44 57 chr2 154375282 154375323 -98881260 + L1MC4 LINE L1 6589 6629 -1413 2216 83 0 3 chr2 154375323 154375613 -98880970 + AluSg SINE Alu 1 289 -21 3617 226 44 57 chr2 154375613 154375784 -98880799 + L1MC4 LINE L1 6629 6801 -1241 2040 123 11 0 chr2 154375784 154376122 -98880461 + AluSp SINE Alu 1 341 0 3617 226 44 57 chr2 154376122 154376628 -98879955 + L1MC4 LINE L1 6801 7294 -748 2129 125 0 0 chr2 154376628 154376924 -98879659 - AluSx SINE Alu -16 296 1 3617 226 44 57 chr2 154376924 154377304 -98879279 + L1MC4 LINE L1 7294 7677 -365 2261 94 0 0 chr2 154377333 154377621 -98878962 - AluSq SINE Alu -25 288 1 1318 149 22 142 chr2 154377677 154378092 -98878491 + L1MC4 LINE L1 7678 8042 0 1909 119 0 48 chr2 154378189 154378484 -98878099 + AluSx SINE Alu 1 281 -31 180 77 0 0 chr2 154378484 154378510 -98878073 + (CA)n Simple_repeat Simple_repeat 1 26 0 189 300 100 25 chr2 154378649 154378729 -98877854 + L2 LINE L2 3098 3183 -89 21 0 0 0 chr2 154378770 154378791 -98877792 + AT_rich Low_complexity Low_complexity 1 21 0 330 264 9 28 chr2 154381126 154381232 -98875351 - MIR SINE MIR 0 262 159 214 239 169 0 chr2 154381259 154381330 -98875253 - MIR SINE MIR -178 84 2 185 277 79 59 chr2 154381466 154381567 -98875016 + MIR3 SINE MIR 54 156 -52 21 0 0 0 chr2 154383917 154383938 -98872645 + AT_rich Low_complexity Low_complexity 1 21 0 2142 105 3 0 chr2 154383984 154384290 -98872293 + AluY SINE Alu 1 307 -4 1936 128 0 45 chr2 154385132 154385444 -98871139 + AluJb SINE Alu 3 300 -12 24 0 0 0 chr2 154386492 154386516 -98870067 + AT_rich Low_complexity Low_complexity 1 24 0 207 69 0 0 chr2 154388261 154388290 -98868293 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1602 174 33 7 chr2 154388292 154388567 -98868016 - AluJo SINE Alu -30 282 1 2321 95 0 0 chr2 154390028 154390324 -98866259 - AluSx SINE Alu -16 296 1 1803 114 73 0 chr2 154392570 154392843 -98863740 + AluJb SINE Alu 1 293 -19 24 0 0 0 chr2 154392843 154392867 -98863716 + AT_rich Low_complexity Low_complexity 1 24 0 2451 64 0 6 chr2 154393031 154393344 -98863239 + AluY SINE Alu 1 311 0 229 356 87 19 chr2 154393422 154393526 -98863057 - L2 LINE L2 -4 3268 3158 28 29 0 0 chr2 154393809 154393844 -98862739 + AT_rich Low_complexity Low_complexity 1 35 0 313 108 12 36 chr2 154393844 154393927 -98862656 + (TTAAA)n Simple_repeat Simple_repeat 1 81 0 37 52 0 0 chr2 154393930 154393988 -98862595 + AT_rich Low_complexity Low_complexity 1 58 0 2503 60 0 13 chr2 154393992 154394306 -98862277 - AluY SINE Alu -1 310 1 625 193 9 0 chr2 154394963 154395077 -98861506 + FLAM_C SINE Alu 3 117 -16 2135 129 3 0 chr2 154395082 154395385 -98861198 - AluSx SINE Alu -8 304 1 216 307 127 40 chr2 154396186 154396336 -98860247 + L3b LINE CR1 1348 1510 -73 1659 189 0 7 chr2 154397525 154397816 -98858767 + AluJo SINE Alu 1 289 -23 29 47 0 0 chr2 154398265 154398308 -98858275 + AT_rich Low_complexity Low_complexity 1 43 0 210 321 75 75 chr2 154398799 154398933 -98857650 + L2 LINE L2 3134 3267 -5 2079 138 0 0 chr2 154400483 154400781 -98855802 + AluSx SINE Alu 3 300 -12 21 0 0 0 chr2 154400781 154400802 -98855781 + AT_rich Low_complexity Low_complexity 1 21 0 624 135 87 0 chr2 154400898 154401002 -98855581 + MLT1D LTR MaLR 351 463 -42 243 241 0 17 chr2 154403438 154403496 -98853087 + GA-rich Low_complexity Low_complexity 2 58 0 2045 106 0 0 chr2 154403572 154403836 -98852747 - AluSg SINE Alu -30 280 17 21 0 0 0 chr2 154406965 154406986 -98849597 + AT_rich Low_complexity Low_complexity 1 21 0 497 237 34 0 chr2 154407621 154407739 -98848844 - MIR SINE MIR -69 193 72 184 250 50 0 chr2 154408071 154408111 -98848472 + MIR SINE MIR 110 151 -57 203 156 0 0 chr2 154408240 154408272 -98848311 + (CATA)n Simple_repeat Simple_repeat 3 34 0 6850 66 14 2 chr2 154408273 154409912 -98846671 - L1PA7 LINE L1 -26 6128 4472 4033 71 19 0 chr2 154409910 154410434 -98846149 + L1PA7 LINE L1 3934 4467 -1679 * 382 279 107 7 chr2 154410629 154410769 -98845814 + MIR3 SINE MIR 49 202 -6 818 272 87 83 chr2 154411704 154412222 -98844361 - MLT1E1 LTR MaLR -134 520 1 187 263 0 0 chr2 154412852 154412890 -98843693 - MER5B DNA MER1_type -38 140 103 * 236 284 11 105 chr2 154412856 154412951 -98843632 + MER5A DNA MER1_type 53 138 -51 252 220 99 66 chr2 154413043 154413134 -98843449 + MIR3 SINE MIR 85 178 -30 1259 185 0 10 chr2 154413287 154413492 -98843091 + AluJb SINE Alu 85 287 -25 1126 299 115 36 chr2 154413875 154414888 -98841695 + L2 LINE L2 2211 3313 0 21 57 0 0 chr2 154414933 154414968 -98841615 + AT_rich Low_complexity Low_complexity 1 35 0 325 261 146 23 chr2 154415772 154415902 -98840681 - MIR3 SINE MIR -5 203 58 660 282 141 28 chr2 154416636 154417153 -98839430 + L2 LINE L2 2733 3313 0 264 271 116 77 chr2 154417165 154417320 -98839263 - MER5B DNA MER1_type -14 164 4 432 237 79 0 chr2 154417344 154417483 -98839100 - L3 LINE CR1 -142 1435 1286 270 209 44 88 chr2 154417489 154417580 -98839003 - L2 LINE L2 0 3313 3227 467 133 0 56 chr2 154417589 154417679 -98838904 + AluS SINE Alu 1 85 -228 762 231 91 67 chr2 154417834 154418176 -98838407 - L1MC4a LINE L1 -1761 6047 5698 706 241 43 36 chr2 154418176 154418404 -98838179 - MER58 DNA MER1_type 0 2420 2195 2193 93 21 4 chr2 154418404 154418729 -98837854 - AluSq SINE Alu 0 330 1 706 241 43 36 chr2 154418729 154418830 -98837753 - MER58 DNA MER1_type -225 2195 3 681 309 122 21 chr2 154418841 154419746 -98836837 - L1MC4a LINE L1 -748 5398 4659 2039 147 23 85 chr2 154419746 154420135 -98836448 - MLT1A1 LTR MaLR 0 365 1 681 309 122 21 chr2 154420135 154420156 -98836427 - L1MC4a LINE L1 -1487 4659 4642 3825 194 71 32 chr2 154420274 154421346 -98835237 - L1MB5 LINE L1 -8 6664 5501 2041 106 46 7 chr2 154421346 154421628 -98834955 - AluSq SINE Alu -20 293 1 3825 194 71 32 chr2 154421628 154422291 -98834292 - L1MB5 LINE L1 -1171 5501 4865 1559 219 75 10 chr2 154422441 154422828 -98833755 - L1MB5 LINE L1 -2222 4422 4007 2076 142 0 19 chr2 154422828 154423146 -98833437 - AluSx SINE Alu 0 312 1 1559 219 75 10 chr2 154423146 154423159 -98833424 - L1MB5 LINE L1 -2637 4007 3996 265 212 15 0 chr2 154423148 154423214 -98833369 - L1MB5 LINE L1 -5045 1601 1535 * 344 167 0 13 chr2 154423215 154423293 -98833290 + CT-rich Low_complexity Low_complexity 3 79 0 2602 206 107 106 chr2 154423294 154423382 -98833201 - L1MB5 LINE L1 -4975 1567 1481 2677 158 29 5 chr2 154423382 154423800 -98832783 - MSTA LTR MaLR 0 428 1 2602 206 107 106 chr2 154423800 154423928 -98832655 - L1MB5 LINE L1 -5061 1481 1355 1875 151 17 13 chr2 154423928 154424227 -98832356 + AluJb SINE Alu 1 300 -12 2602 206 107 106 chr2 154424227 154424367 -98832216 - L1MB5 LINE L1 -5187 1355 1217 1930 138 47 3 chr2 154424367 154424665 -98831918 - AluSx SINE Alu -1 311 1 2602 206 107 106 chr2 154424665 154425525 -98831058 - L1MB5 LINE L1 -5325 1217 348 1792 164 20 7 chr2 154425540 154425982 -98830601 + AluJb SINE Alu 10 455 0 1152 18 58 6 chr2 154425988 154426159 -98830424 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 640 253 57 18 chr2 154426249 154426478 -98830105 - L1MB5 LINE L1 -6291 251 14 313 283 125 27 chr2 154427012 154427196 -98829387 - HAL1b LINE L1 -444 904 703 321 284 16 0 chr2 154427203 154427330 -98829253 - L1M4 LINE L1 -1450 4696 4568 1059 152 11 0 chr2 154427698 154427876 -98828707 - AluSg/x SINE Alu -4 308 129 2298 147 91 47 chr2 154428156 154428586 -98827997 - LTR47A LTR ERVL 0 452 4 197 322 70 56 chr2 154428865 154429008 -98827575 + L2 LINE L2 2914 3058 -214 1842 104 86 25 chr2 154429053 154429333 -98827250 - AluSq SINE Alu -16 297 1 2359 78 7 0 chr2 154430432 154430727 -98825856 - AluSp SINE Alu -16 297 1 967 219 71 29 chr2 154430807 154431118 -98825465 - MER33 DNA MER1_type 0 324 1 1388 204 148 30 chr2 154431196 154431627 -98824956 + MER74A LTR ERVL 4 485 -73 1693 145 3 63 chr2 154431632 154431971 -98824612 + AluJb SINE Alu 1 312 0 1828 211 23 129 chr2 154431984 154432682 -98823901 + LTR8 LTR ERV1 1 624 -67 198 91 0 0 chr2 154432683 154432716 -98823867 + (A)n Simple_repeat Simple_repeat 1 33 0 279 103 0 0 chr2 154432937 154432976 -98823607 - MER91 DNA MER1_type 0 140 102 876 161 45 96 chr2 154433370 154433569 -98823014 - MER5A DNA MER1_type 0 189 1 1531 179 21 17 chr2 154433817 154434108 -98822475 - AluJo SINE Alu -20 292 1 2302 84 0 0 chr2 154434115 154434436 -98822147 - AluSq SINE Alu 0 321 1 224 59 29 0 chr2 154435545 154435579 -98821004 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 514 234 14 69 chr2 154435601 154435746 -98820837 + MER5B DNA MER1_type 42 178 0 360 291 139 0 chr2 154435757 154435922 -98820661 + MIR SINE MIR 66 253 -9 1097 224 72 73 chr2 154436006 154436426 -98820157 + L1ME2 LINE L1 5188 5598 -566 8376 131 18 5 chr2 154436436 154437715 -98818868 + HSMAR2 DNA Mariner 7 1302 0 1737 228 66 14 chr2 154437739 154438222 -98818361 + L1ME2 LINE L1 5648 6155 -9 33 56 0 0 chr2 154438383 154438437 -98818146 + AT_rich Low_complexity Low_complexity 1 54 0 1423 184 68 130 chr2 154438652 154438901 -98817682 + L1MC5 LINE L1 6857 7120 -841 2242 101 3 28 chr2 154438901 154439219 -98817364 - AluSx SINE Alu -2 310 1 2474 77 3 0 chr2 154439228 154439540 -98817043 - AluSq SINE Alu 0 313 1 2386 107 0 0 chr2 154439544 154439854 -98816729 - AluSx SINE Alu -2 310 1 1423 184 68 130 chr2 154439854 154440191 -98816392 + L1MC5 LINE L1 7131 7421 -540 2371 107 3 0 chr2 154440350 154440660 -98815923 - AluSq SINE Alu -2 311 1 1075 211 99 55 chr2 154440930 154441404 -98815179 + L1MC5 LINE L1 7432 7926 -35 23 54 0 0 chr2 154441542 154441579 -98815004 + AT_rich Low_complexity Low_complexity 1 37 0 2912 169 19 21 chr2 154441822 154442336 -98814247 + MLT2B3 LTR ERVL 1 513 -41 327 132 0 0 chr2 154442338 154442406 -98814177 + (TCTA)n Simple_repeat Simple_repeat 3 70 0 357 120 0 5 chr2 154442416 154442477 -98814106 + MLT2B3 LTR ERVL 462 554 0 2128 104 7 3 chr2 154442790 154443079 -98813504 - AluSq SINE Alu -23 290 1 1187 234 65 42 chr2 154443080 154443417 -98813166 + MLT2B1 LTR ERVL 102 446 -74 1181 142 0 27 chr2 154443446 154443592 -98812991 - U2 snRNA snRNA -3 185 43 2850 97 11 3 chr2 154443592 154443953 -98812630 + THE1B LTR MaLR 1 364 0 1181 142 0 27 chr2 154443953 154443989 -98812594 - U2 snRNA snRNA -145 43 8 343 200 0 25 chr2 154443988 154444068 -98812515 + MLT2C2 LTR ERVL 385 462 -2 * 2522 204 52 12 chr2 154444072 154444742 -98811841 + MLT1-int LTR MaLR 5 884 -487 399 239 0 0 chr2 154444793 154444881 -98811702 + MLT-int LTR MaLR 680 767 -968 2201 184 30 5 chr2 154445011 154445414 -98811169 + MLT1B-int LTR MaLR 1317 1729 -6 1728 220 25 38 chr2 154445420 154445815 -98810768 + MLT1B LTR MaLR 1 390 0 437 215 65 0 chr2 154445946 154446053 -98810530 - L1MA10 LINE L1 0 6334 6221 2093 117 0 0 chr2 154446272 154446554 -98810029 - AluJb SINE Alu -18 294 13 2607 186 9 24 chr2 154446554 154447091 -98809492 - L1MC3 LINE L1 -8 7777 7249 1478 257 120 0 chr2 154447585 154447841 -98808742 - MER90 LTR ERV1 -105 509 285 2291 146 82 27 chr2 154447841 154448245 -98808338 + MSTB LTR MaLR 1 426 0 1478 257 120 0 chr2 154448245 154448439 -98808144 - MER90 LTR ERV1 -329 285 5 220 288 0 0 chr2 154448461 154448527 -98808056 - MIR SINE MIR -43 219 154 329 313 42 6 chr2 154448527 154448693 -98807890 - LTR16C LTR ERVL 0 491 320 186 315 56 11 chr2 154450333 154450422 -98806161 - L2 LINE L2 -10 3303 3211 293 250 0 0 chr2 154450686 154450750 -98805833 + MIR3 SINE MIR 93 156 -52 609 205 135 0 chr2 154450794 154450955 -98805628 - MER5A DNA MER1_type 0 189 4 515 307 68 5 chr2 154451014 154451206 -98805377 + MIR SINE MIR 47 250 -12 515 252 46 14 chr2 154651649 154651867 -98604716 + L1MCa LINE L1 1743 1967 -4459 1325 228 27 20 chr2 154651869 154652308 -98604275 + L1MCa LINE L1 2117 2558 -4049 1987 119 0 61 chr2 154652319 154652646 -98603937 + AluSx SINE Alu 1 307 -5 36 82 0 0 chr2 154652689 154652774 -98603809 + AT_rich Low_complexity Low_complexity 1 85 0 321 298 19 10 chr2 154652864 154652968 -98603615 - MIR SINE MIR -121 141 37 741 221 0 0 chr2 154654092 154654241 -98602342 + AluJb SINE Alu 5 153 -159 229 136 0 61 chr2 154654241 154654307 -98602276 - AluJb SINE Alu -166 136 75 1011 136 0 0 chr2 154654310 154654457 -98602126 + AluSg/x SINE Alu 150 296 -16 867 248 33 19 chr2 154654459 154654673 -98601910 + MIR SINE MIR 25 241 -21 7005 54 17 3 chr2 154656759 154658282 -98598301 - L1PA7 LINE L1 -4 6150 4617 218 0 45 45 chr2 154658964 154659008 -98597575 + (CTATA)n Simple_repeat Simple_repeat 2 45 0 258 220 0 0 chr2 154659038 154659097 -98597486 + (TA)n Simple_repeat Simple_repeat 1 59 0 2199 125 0 10 chr2 154659098 154659411 -98597172 - AluSg SINE Alu 0 310 1 512 344 36 0 chr2 154659415 154659610 -98596973 - MIR SINE MIR -11 251 50 207 250 179 83 chr2 154659630 154659714 -98596869 + L2 LINE L2 3162 3253 -19 204 235 49 62 chr2 154659813 154659894 -98596689 - L2 LINE L2 -1 3312 3233 6476 148 41 14 chr2 154660542 154661726 -98594857 + Tigger3b DNA MER2_type 15 1231 0 545 347 53 21 chr2 154661892 154662270 -98594313 - L2 LINE L2 -1228 2086 1697 225 0 0 0 chr2 154662616 154662641 -98593942 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 5616 41 1 3 chr2 154662641 154663328 -98593255 - L1PA3 LINE L1 -10 6145 5460 3081 119 64 68 chr2 154663430 154664546 -98592037 + pTR5 LTR ERV1 809 2295 -143 785 279 57 27 chr2 154664560 154664989 -98591594 + L2 LINE L2 2058 2557 -757 279 211 56 0 chr2 154665051 154665122 -98591461 + MLT1J LTR MaLR 43 117 -394 811 214 24 9 chr2 154665123 154665333 -98591250 + MLT2B3 LTR ERVL 1 213 -341 222 114 45 23 chr2 154665354 154665398 -98591185 + CT-rich Low_complexity Low_complexity 4 48 0 917 231 5 23 chr2 154665398 154665619 -98590964 + MLT2B3 LTR ERVL 223 439 -115 673 142 0 93 chr2 154665625 154665787 -98590796 + MLT2A2 LTR ERVL 307 453 0 316 260 0 0 chr2 154665787 154665860 -98590723 + MLT1J LTR MaLR 114 186 -325 184 308 65 37 chr2 154666115 154666222 -98590361 - MIR SINE MIR -21 241 132 1547 163 129 15 chr2 154666476 154666802 -98589781 - MLT1A1 LTR MaLR -2 363 1 2074 97 0 0 chr2 154667469 154667737 -98588846 - AluY SINE Alu -1 310 43 414 309 11 32 chr2 154669018 154669337 -98587246 + CT-rich Low_complexity Low_complexity 1 312 0 23274 124 8 29 chr2 154669647 154670022 -98586561 - L1P3 LINE L1 -1536 4925 4544 1976 107 57 4 chr2 154670022 154670303 -98586280 - AluY SINE Alu -15 296 1 23274 124 8 29 chr2 154670303 154674423 -98582160 - L1P3 LINE L1 -1917 4544 434 1494 134 33 65 chr2 154675511 154675817 -98580766 + AluSx SINE Alu 1 296 -16 8684 24 1 1 chr2 154676052 154677260 -98579323 - L1P1 LINE L1 -646 5509 4301 1589 125 97 28 chr2 154678250 154678538 -98578045 - AluSx SINE Alu -4 308 1 478 133 0 0 chr2 154678551 154678626 -98577957 - AluS SINE Alu -238 75 1 25 31 0 0 chr2 154678631 154678663 -98577920 + AT_rich Low_complexity Low_complexity 1 32 0 2216 73 0 0 chr2 154679488 154679762 -98576821 + AluY SINE Alu 1 274 -37 246 32 0 0 chr2 154679914 154679945 -98576638 + (TG)n Simple_repeat Simple_repeat 2 32 0 342 0 0 0 chr2 154680442 154680480 -98576103 + (CA)n Simple_repeat Simple_repeat 2 39 0 254 292 0 0 chr2 154680833 154680904 -98575679 - MIR SINE MIR -63 145 94 224 328 112 17 chr2 154681292 154681408 -98575175 + L2 LINE L2 3168 3294 -19 246 240 72 40 chr2 154681612 154681737 -98574846 - L3 LINE CR1 -697 880 752 686 287 101 0 chr2 154681890 154682127 -98574456 + MIR SINE MIR 2 262 0 368 277 34 103 chr2 154683461 154683753 -98572830 + MLT1J LTR MaLR 137 408 -103 2066 155 35 16 chr2 154683755 154684123 -98572460 + THE1C LTR MaLR 1 375 0 232 292 68 21 chr2 154687170 154687362 -98569221 - HAL1b LINE L1 -442 906 706 22 0 0 0 chr2 154687715 154687737 -98568846 + AT_rich Low_complexity Low_complexity 1 22 0 638 258 59 5 chr2 154688181 154688367 -98568216 - MIR SINE MIR -12 250 55 1561 196 82 6 chr2 154688784 154689115 -98567468 + MLT1A1 LTR MaLR 4 359 -6 691 252 62 44 chr2 154689121 154689347 -98567236 - MIR SINE MIR -22 240 11 262 238 0 48 chr2 154689810 154689873 -98566710 + MER5A DNA MER1_type 9 68 -121 1831 135 23 40 chr2 154689873 154690177 -98566406 + AluSx SINE Alu 1 299 -13 823 112 5 43 chr2 154690179 154690366 -98566217 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 1170 218 40 48 chr2 154690756 154691155 -98565428 - MER66A LTR ERV1 -54 424 29 252 261 80 0 chr2 154691319 154691407 -98565176 + MIR SINE MIR 131 225 -37 422 263 171 19 chr2 154691466 154691671 -98564912 - MIR SINE MIR -15 247 12 2336 98 3 0 chr2 154691708 154692015 -98564568 + AluSg SINE Alu 1 308 -2 23 33 0 0 chr2 154692498 154692528 -98564055 + AT_rich Low_complexity Low_complexity 1 30 0 2218 109 0 28 chr2 154692777 154693097 -98563486 + AluSq SINE Alu 3 313 0 209 209 0 0 chr2 154693553 154693596 -98562987 - L2 LINE L2 -4 3309 3267 * 307 274 88 0 chr2 154693586 154693699 -98562884 + MIR SINE MIR 131 253 -9 21 36 0 0 chr2 154693923 154693951 -98562632 + AT_rich Low_complexity Low_complexity 1 28 0 264 430 23 0 chr2 154696552 154696680 -98559903 - L2 LINE L2 -1 3271 3141 250 250 136 15 chr2 154697065 154697197 -98559386 - MLT1L LTR MaLR -436 179 32 413 231 133 63 chr2 154697310 154697453 -98559130 - MER5A DNA MER1_type -1 188 36 185 152 130 0 chr2 154698085 154698131 -98558452 - MIR SINE MIR -28 234 183 1600 197 7 23 chr2 154698164 154698469 -98558114 - AluJo SINE Alu -12 300 1 1535 197 42 14 chr2 154698522 154698877 -98557706 + MLT1A1 LTR MaLR 1 365 0 226 293 76 85 chr2 154698915 154699251 -98557332 + L2 LINE L2 2712 3052 -220 1173 202 24 17 chr2 154703254 154703541 -98553042 + MLT2D LTR ERVL 1 289 -125 645 286 50 6 chr2 154704340 154704562 -98552021 - MIR SINE MIR -34 228 1 520 159 0 23 chr2 154705716 154705804 -98550779 + FRAM SINE Alu 34 119 -57 524 300 12 18 chr2 154707680 154707850 -98548733 + MER5B DNA MER1_type 2 170 -8 500 252 25 0 chr2 154708647 154708782 -98547801 - MIR SINE MIR -10 252 115 285 344 49 7 chr2 154710455 154710609 -98545974 + MIR SINE MIR 32 192 -70 36 77 0 0 chr2 154711003 154711081 -98545502 + AT_rich Low_complexity Low_complexity 1 78 0 614 283 114 25 chr2 154711271 154711334 -98545249 - L1ME3A LINE L1 -203 5967 5911 234 91 0 0 chr2 154711334 154711367 -98545216 + (TA)n Simple_repeat Simple_repeat 1 33 0 614 283 114 25 chr2 154711367 154711699 -98544884 - L1ME3A LINE L1 -259 5911 5537 1161 131 22 77 chr2 154711762 154711984 -98544599 - AluJo SINE Alu -15 297 88 1542 185 56 60 chr2 154712148 154712613 -98543970 - MLT1C LTR MaLR -4 463 1 310 231 171 0 chr2 154713646 154713686 -98542897 - L1MA10 LINE L1 -4 6330 6291 1844 266 64 28 chr2 154713686 154714439 -98542144 - L1ME1 LINE L1 -53 6113 5334 3089 122 10 14 chr2 154714447 154714964 -98541619 + L1MC1 LINE L1 5695 6209 -124 360 155 0 0 chr2 154715001 154715072 -98541511 + CT-rich Low_complexity Low_complexity 3 73 0 210 162 0 0 chr2 154715146 154715183 -98541400 + T-rich Low_complexity Low_complexity 2 38 0 594 87 0 58 chr2 154715284 154715388 -98541195 - L1MC1 LINE L1 0 6333 6236 1040 238 34 13 chr2 154715390 154715773 -98540810 - L1ME1 LINE L1 -797 5349 4959 497 139 52 26 chr2 154715819 154715934 -98540649 - L1MC3 LINE L1 -1163 6622 6505 286 268 24 8 chr2 154715988 154716115 -98540468 - L1ME1 LINE L1 -2648 3498 3370 330 284 122 5 chr2 154716770 154716992 -98539591 - L1MC3 LINE L1 -1875 5933 5686 594 297 44 22 chr2 154717110 154717430 -98539153 - L1MC3 LINE L1 -2175 5633 5307 611 294 44 22 chr2 154719301 154719621 -98536962 - L1MC/D LINE L1 -2175 5633 5307 180 111 0 0 chr2 154721198 154721225 -98535358 + (T)n Simple_repeat Simple_repeat 1 27 0 611 184 24 8 chr2 154721451 154721576 -98535007 + L2 LINE L2 3187 3313 0 352 250 27 54 chr2 154721653 154721738 -98534845 - MLT1G1 LTR MaLR -14 528 447 4348 119 14 48 chr2 154721738 154722453 -98534130 + LTR8 LTR ERV1 1 691 0 352 250 27 54 chr2 154722453 154722515 -98534068 - MLT1G1 LTR MaLR -95 447 385 4132 142 22 27 chr2 154722518 154723249 -98533334 + LTR8A LTR ERV1 1 727 0 876 243 42 57 chr2 154723269 154723602 -98532981 - MLT1G1 LTR MaLR -279 299 1 449 263 65 23 chr2 154724761 154724933 -98531650 + MIR SINE MIR 3 174 -62 478 282 146 5 chr2 154726541 154726754 -98529829 + MIR SINE MIR 8 250 -12 319 303 41 25 chr2 154726909 154727031 -98529552 + L2 LINE L2 3190 3313 0 21 36 0 0 chr2 154727162 154727190 -98529393 + AT_rich Low_complexity Low_complexity 1 28 0 780 262 22 22 chr2 154728437 154728666 -98527917 - MIR SINE MIR -1 261 33 189 0 0 0 chr2 154728762 154728783 -98527800 + (T)n Simple_repeat Simple_repeat 1 21 0 356 347 36 5 chr2 154730393 154730589 -98525994 + L2 LINE L2 2252 2453 -861 290 259 148 0 chr2 154730640 154730748 -98525835 - L1ME3 LINE L1 -30 6132 6009 342 304 155 38 chr2 154730781 154731097 -98525486 + L2 LINE L2 2519 2871 -443 386 323 92 41 chr2 154731280 154731596 -98524987 + L2 LINE L2 2982 3313 0 612 302 28 12 chr2 154733342 154733597 -98522986 - MIR SINE MIR -1 261 3 379 272 161 50 chr2 154733756 154733936 -98522647 + MIR3 SINE MIR 2 201 -7 234 257 81 14 chr2 154735125 154735199 -98521384 + MIR3 SINE MIR 97 175 -33 22 0 0 0 chr2 154736102 154736124 -98520459 + AT_rich Low_complexity Low_complexity 1 22 0 2235 80 0 48 chr2 154736234 154736545 -98520038 + AluSg SINE Alu 1 296 -14 255 31 0 0 chr2 154739197 154739229 -98517354 + (CA)n Simple_repeat Simple_repeat 1 32 0 365 212 66 44 chr2 154739382 154739519 -98517064 - L1ME4a LINE L1 -2 6119 5980 279 196 72 52 chr2 154739734 154739831 -98516752 - MIR SINE MIR -45 217 119 252 335 58 13 chr2 154740212 154740367 -98516216 + MER5A DNA MER1_type 7 168 -21 2589 116 6 3 chr2 154740493 154740856 -98515727 + THE1B LTR MaLR 1 364 0 541 191 95 54 chr2 154741484 154741652 -98514931 - Charlie8 DNA MER1_type -2204 213 39 34 0 0 0 chr2 154742199 154742233 -98514350 + AT_rich Low_complexity Low_complexity 1 34 0 255 208 16 40 chr2 154743089 154743214 -98513369 + A-rich Low_complexity Low_complexity 4 125 0 290 214 114 0 chr2 154744584 154744654 -98511929 - L2 LINE L2 -4 3309 3232 21 0 0 0 chr2 154746215 154746236 -98510347 + AT_rich Low_complexity Low_complexity 1 21 0 2303 107 0 3 chr2 154746733 154747042 -98509541 + AluSg SINE Alu 1 308 -2 252 0 0 0 chr2 154747575 154747603 -98508980 + (A)n Simple_repeat Simple_repeat 1 28 0 327 85 0 0 chr2 154749696 154749743 -98506840 + (CA)n Simple_repeat Simple_repeat 1 47 0 543 147 119 9 chr2 154749932 154750041 -98506542 - LTR8A LTR ERV1 -606 121 1 374 198 10 31 chr2 154750041 154750137 -98506446 - L1MD3 LINE L1 -511 7484 7391 266 224 0 17 chr2 154750137 154750195 -98506388 - MLT1F1 LTR MaLR -456 111 55 715 139 28 67 chr2 154750225 154750405 -98506178 - L1MC3 LINE L1 -699 7086 6914 2158 70 7 34 chr2 154750515 154750813 -98505770 - AluY SINE Alu -19 292 3 3435 57 2 18 chr2 154750919 154751374 -98505209 - LTR7 LTR ERV1 -2 448 1 2280 80 59 13 chr2 154751374 154751747 -98504836 - HERVH LTR ERV1 0 7713 7324 1270 143 19 0 chr2 154751747 154751963 -98504620 - HERVH LTR ERV1 -1894 5819 5600 4408 114 0 3 chr2 154751964 154752628 -98503955 - HERVH LTR ERV1 -2564 5149 4488 5588 96 6 2 chr2 154752629 154753481 -98503102 - HERVH LTR ERV1 -3719 3994 3140 * 13566 112 14 32 chr2 154753460 154756302 -98500281 - HERVH LTR ERV1 -4718 2995 1 3402 51 7 18 chr2 154756304 154756757 -98499826 - LTR7 LTR ERV1 -2 448 1 369 0 0 0 chr2 154757518 154757559 -98499024 + (CA)n Simple_repeat Simple_repeat 1 41 0 25 0 0 0 chr2 154757719 154757744 -98498839 + AT_rich Low_complexity Low_complexity 1 25 0 629 254 47 54 chr2 154757869 154758145 -98498438 - MER34 LTR ERV1 -268 274 1 316 239 69 62 chr2 154758199 154758329 -98498254 + L2 LINE L2 3177 3307 -6 264 326 0 0 chr2 154759755 154759841 -98496742 + GA-rich Low_complexity Low_complexity 1 86 0 190 340 0 0 chr2 154760794 154760844 -98495739 - MER5A DNA MER1_type -79 110 61 271 61 61 0 chr2 154761131 154761180 -98495403 + CT-rich Low_complexity Low_complexity 3 54 0 270 294 15 0 chr2 154762613 154762681 -98493902 + tRNA-Ile-ATT tRNA tRNA 6 74 -3 1002 237 31 46 chr2 154762830 154763155 -98493428 + L2 LINE L2 2539 2858 -456 24 67 0 0 chr2 154763364 154763409 -98493174 + AT_rich Low_complexity Low_complexity 1 45 0 5772 104 40 0 chr2 154763707 154764501 -98492082 + LTR12 LTR ERV1 1 826 0 650 263 5 39 chr2 154764562 154764767 -98491816 - L2 LINE L2 0 3313 3116 22 35 0 0 chr2 154764936 154764965 -98491618 + AT_rich Low_complexity Low_complexity 1 29 0 197 105 0 26 chr2 154765433 154765471 -98491112 + (TAAAAA)n Simple_repeat Simple_repeat 4 40 0 21 0 0 0 chr2 154765604 154765625 -98490958 + AT_rich Low_complexity Low_complexity 1 21 0 2136 111 0 7 chr2 154765671 154765977 -98490606 - AluY SINE Alu 0 311 8 300 248 110 75 chr2 154766652 154766987 -98489596 - L1ME4a LINE L1 -117 6004 5658 25 75 0 0 chr2 154767552 154767605 -98488978 + AT_rich Low_complexity Low_complexity 1 53 0 863 225 0 22 chr2 154767614 154767792 -98488791 - FAM SINE Alu -1 174 1 2032 149 3 10 chr2 154770119 154770420 -98486163 + AluSq SINE Alu 1 299 -14 315 361 69 13 chr2 154770993 154771148 -98485435 - MIR SINE MIR -64 144 20 243 320 63 45 chr2 154771565 154771943 -98484640 + MARNA DNA Mariner 132 516 -70 1904 138 67 0 chr2 154771990 154772273 -98484310 + AluSx SINE Alu 1 302 -10 1508 216 10 0 chr2 154772382 154772679 -98483904 - AluJo SINE Alu -12 300 1 1383 266 44 11 chr2 154772730 154773267 -98483316 - L1ME3 LINE L1 -47 6115 5544 23 68 0 0 chr2 154773319 154773363 -98483220 + AT_rich Low_complexity Low_complexity 1 44 0 2461 68 0 10 chr2 154774960 154775268 -98481315 - AluY SINE Alu -6 305 1 280 236 36 45 chr2 154775604 154775714 -98480869 + LTR16C LTR ERVL 320 428 -63 5395 157 34 10 chr2 154775720 154777236 -98479347 + L1MA8 LINE L1 4738 6291 0 499 325 77 29 chr2 154777552 154777967 -98478616 + ERVL LTR ERVL 3362 3796 -1968 2525 65 0 7 chr2 154779824 154780132 -98476451 + AluY SINE Alu 1 306 -5 298 230 80 40 chr2 154780677 154780777 -98475806 - MER5A DNA MER1_type -77 112 9 268 182 0 0 chr2 154780896 154780951 -98475632 - MLT2B1 LTR ERVL -8 512 458 391 216 12 0 chr2 154780968 154781130 -98475453 + (TA)n Simple_repeat Simple_repeat 1 164 0 361 298 69 38 chr2 154781134 154781396 -98475187 + L1ME LINE L1 5493 5762 -359 231 238 10 20 chr2 154781400 154781501 -98475082 + (TA)n Simple_repeat Simple_repeat 2 101 0 425 348 32 22 chr2 154781546 154781859 -98474724 - L1MC/D LINE L1 -2048 5760 5445 393 251 87 51 chr2 154781882 154782151 -98474432 - L1MC/D LINE L1 -743 5403 5114 243 298 13 20 chr2 154782187 154782338 -98474245 - L1MC/D LINE L1 -1088 5058 4909 576 213 35 44 chr2 154782614 154782840 -98473743 + MER106B DNA MER1_type 6 1058 -1 467 324 97 35 chr2 154782969 154783166 -98473417 - L1MC/D LINE L1 -1721 4425 4242 2414 82 0 3 chr2 154783166 154783470 -98473113 + AluY SINE Alu 1 303 -8 467 324 97 35 chr2 154783470 154783643 -98472940 - L1MC/D LINE L1 -1904 4242 4032 272 263 116 56 chr2 154783697 154783982 -98472601 - L1MC/D LINE L1 -2216 3930 3629 2157 129 6 10 chr2 154784019 154784330 -98472253 - AluSx SINE Alu 0 312 3 312 257 80 43 chr2 154784713 154784900 -98471683 - L1MC/D LINE L1 -2877 3269 3076 2343 91 7 0 chr2 154785477 154785784 -98470799 - AluSg SINE Alu -1 309 1 310 273 11 0 chr2 154787440 154787528 -98469055 + MLT1H LTR MaLR 66 154 -395 343 147 53 13 chr2 154787734 154787809 -98468774 + MLT1G1 LTR MaLR 500 577 -18 5839 150 34 18 chr2 154788369 154789362 -98467221 - L1MA4A LINE L1 -5 6298 5323 2157 121 0 0 chr2 154789362 154789659 -98466924 - AluSx SINE Alu -4 308 12 5839 150 34 18 chr2 154789659 154790541 -98466042 - L1MA4A LINE L1 -980 5323 4381 180 0 0 0 chr2 154790541 154790561 -98466022 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 5839 150 34 18 chr2 154790561 154790778 -98465805 - L1MA4A LINE L1 -1922 4381 4169 21 57 0 0 chr2 154790965 154791000 -98465583 + AT_rich Low_complexity Low_complexity 1 35 0 7194 54 0 1 chr2 154791007 154792205 -98464378 + L1PA6 LINE L1 4958 6154 0 447 175 91 7 chr2 154792209 154792352 -98464231 + Charlie5 DNA MER1_type 2374 2528 -84 264 310 0 11 chr2 154792637 154792724 -98463859 - MIR SINE MIR 0 262 177 617 278 17 28 chr2 154792815 154792995 -98463588 + MER5B DNA MER1_type 1 178 0 1299 190 52 25 chr2 154793638 154794088 -98462495 + MLT2B1 LTR ERVL 6 520 0 218 286 82 6 chr2 154794265 154794338 -98462245 + MIR SINE MIR 8 147 -61 4434 172 18 33 chr2 154794350 154795327 -98461256 - L1MA8 LINE L1 0 6291 5329 6864 194 13 6 chr2 154795337 154797778 -98458805 - L1PA16 LINE L1 -95 6071 3617 1286 292 84 14 chr2 154797838 154798992 -98457591 - L1M2 LINE L1 -4338 2830 1614 258 374 11 0 chr2 154800062 154800153 -98456430 - L2 LINE L2 -19 3253 3162 205 327 78 52 chr2 154800420 154800573 -98456010 + MIR SINE MIR 58 214 -48 1196 227 41 38 chr2 154801267 154801558 -98455025 + AluJo SINE Alu 2 293 -9 1612 174 56 16 chr2 154801576 154802006 -98454577 + L1M4 LINE L1 5189 5641 -543 1163 228 45 35 chr2 154802231 154802520 -98454063 + AluJo SINE Alu 2 293 -9 4287 167 46 15 chr2 154802538 154803485 -98453098 + L1MB7 LINE L1 5189 6165 -19 676 272 60 43 chr2 154805402 154805637 -98450946 - MIR SINE MIR -21 241 3 182 37 37 0 chr2 154807500 154807527 -98449056 + (TC)n Simple_repeat Simple_repeat 2 29 0 414 0 0 0 chr2 154807534 154807580 -98449003 + (CA)n Simple_repeat Simple_repeat 1 46 0 686 223 59 59 chr2 154807903 154808105 -98448478 - MIR SINE MIR -34 228 27 2252 87 0 10 chr2 154808510 154808810 -98447773 + AluY SINE Alu 1 297 -14 333 0 0 0 chr2 154808814 154808851 -98447732 + (CA)n Simple_repeat Simple_repeat 2 38 0 215 338 13 0 chr2 154809044 154809121 -98447462 - L3 LINE CR1 -147 1430 1353 189 250 71 0 chr2 154809123 154809179 -98447404 + MIR SINE MIR 203 262 0 2071 121 4 0 chr2 154810534 154810861 -98445722 - AluSg SINE Alu 0 328 1 466 270 77 30 chr2 154810879 154811077 -98445506 - MIR SINE MIR 0 262 52 778 233 11 16 chr2 154811166 154811355 -98445228 + MER3 DNA MER1_type 19 206 -3 310 236 14 0 chr2 154811882 154811954 -98444629 - MIR SINE MIR -70 192 120 1191 52 0 7 chr2 154813202 154813357 -98443226 - AluY SINE Alu -1 310 157 201 213 21 0 chr2 154814532 154814579 -98442004 + (TTA)n Simple_repeat Simple_repeat 3 50 0 1950 124 147 21 chr2 154814767 154814948 -98441635 - MSTA LTR MaLR 0 428 271 399 41 0 0 chr2 154814948 154814997 -98441586 + (GA)n Simple_repeat Simple_repeat 2 50 0 1950 124 147 21 chr2 154814997 154815195 -98441388 - MSTA LTR MaLR -157 271 1 2553 117 3 11 chr2 154815325 154815692 -98440891 + THE1B LTR MaLR 1 364 0 21 36 0 0 chr2 154815753 154815781 -98440802 + AT_rich Low_complexity Low_complexity 1 28 0 264 198 55 66 chr2 154816482 154816573 -98440010 - Charlie7 DNA MER1_type -2515 97 8 767 277 24 0 chr2 154817397 154817610 -98438973 + L1ME2 LINE L1 5938 6155 -9 1997 271 70 8 chr2 154818232 154818993 -98437590 + L1ME3A LINE L1 5297 6104 -66 24 32 0 0 chr2 154819319 154819350 -98437233 + AT_rich Low_complexity Low_complexity 1 31 0 3304 168 75 49 chr2 154819817 154820311 -98436272 - LTR48 LTR ERV1 -1 786 264 3524 102 12 0 chr2 154820311 154820819 -98435764 + MER75 DNA T2_type 1 514 0 3304 168 75 49 chr2 154820819 154821079 -98435504 - LTR48 LTR ERV1 -523 264 12 22 0 0 0 chr2 154822839 154822861 -98433722 + AT_rich Low_complexity Low_complexity 1 22 0 209 209 114 0 chr2 154823987 154824031 -98432552 - MIR SINE MIR -65 143 96 629 224 107 68 chr2 154826072 154826353 -98430230 + L1ME3A LINE L1 5879 6170 0 196 340 19 29 chr2 154826934 154827037 -98429546 - L3 LINE CR1 -188 1389 1288 341 291 57 57 chr2 154827040 154827215 -98429368 - MER5B DNA MER1_type 0 178 4 479 384 73 9 chr2 154827237 154827578 -98429005 - L3 LINE CR1 -324 1253 891 211 322 144 0 chr2 154827645 154827735 -98428848 - L2 LINE L2 -53 3219 3117 416 264 124 8 chr2 154828574 154828703 -98427880 - L3 LINE CR1 -760 817 674 28 29 0 0 chr2 154828863 154828898 -98427685 + AT_rich Low_complexity Low_complexity 1 35 0 1676 280 92 39 chr2 154829129 154830219 -98426364 - L1M4 LINE L1 -940 5206 4060 10069 235 41 27 chr2 154830263 154831678 -98424905 - L1PBb LINE L1 -1389 5459 4066 2476 27 41 0 chr2 154831678 154831972 -98424611 + AluY SINE Alu 1 306 -5 10069 235 41 27 chr2 154831972 154834473 -98422110 - L1PBb LINE L1 -2782 4066 1427 306 325 118 39 chr2 154835196 154835476 -98421107 - L1PBb LINE L1 -6539 310 9 340 294 80 59 chr2 154835489 154835676 -98420907 - L1MEd LINE L1 -5287 832 642 317 290 40 24 chr2 154836017 154836141 -98420442 - L1MEd LINE L1 -5943 176 51 209 263 100 0 chr2 154836152 154836232 -98420351 - L3 LINE CR1 -1080 497 410 337 248 8 66 chr2 154836876 154836997 -98419586 - MER97c DNA MER1_type? -928 162 49 242 211 88 79 chr2 154837326 154837440 -98419143 + MIR SINE MIR 103 217 -45 949 80 0 22 chr2 154837697 154837835 -98418748 + AluSp/q SINE Alu 179 313 0 423 0 0 0 chr2 154838506 154838553 -98418030 + (TG)n Simple_repeat Simple_repeat 2 48 0 975 341 131 35 chr2 154839678 154841068 -98415515 + L2 LINE L2 1744 3260 -12 180 111 0 0 chr2 154841345 154841372 -98415211 + (ATG)n Simple_repeat Simple_repeat 1 27 0 23 0 0 0 chr2 154842505 154842528 -98414055 + AT_rich Low_complexity Low_complexity 1 23 0 820 255 11 5 chr2 154843434 154843660 -98412923 + MIR SINE MIR 26 252 -10 195 42 0 0 chr2 154844005 154844029 -98412554 + (TTG)n Simple_repeat Simple_repeat 2 25 0 31 18 0 53 chr2 154844293 154844350 -98412233 + AT_rich Low_complexity Low_complexity 1 54 0 528 250 64 37 chr2 154844410 154844598 -98411985 + MIR SINE MIR 44 236 -26 414 136 58 0 chr2 154844893 154845048 -98411535 + (TA)n Simple_repeat Simple_repeat 2 165 0 371 118 69 0 chr2 154845221 154845365 -98411218 + (TA)n Simple_repeat Simple_repeat 1 154 0 264 298 117 11 chr2 154845703 154845797 -98410786 + MIR SINE MIR 14 117 -145 186 227 61 15 chr2 154845852 154845918 -98410665 + MIR SINE MIR 193 261 -1 1252 213 71 41 chr2 154848886 154849280 -98407303 - MER96B DNA MER1_type? -1 416 11 223 414 16 0 chr2 154849893 154850021 -98406562 + MIR3 SINE MIR 64 193 -15 1771 193 94 13 chr2 154851815 154852208 -98404375 + MSTB1 LTR MaLR 8 432 0 215 202 180 56 chr2 154852267 154852356 -98404227 + MIR SINE MIR 82 181 -81 375 216 11 11 chr2 154852469 154852557 -98404026 - LTR33A LTR ERVL -2 521 434 1259 206 63 129 chr2 154853113 154853555 -98403028 + MLT2B1 LTR ERVL 1 413 -1 340 298 12 53 chr2 154854101 154854272 -98402311 + HAL1b LINE L1 747 910 -438 239 267 57 9 chr2 154854360 154854465 -98402118 + HAL1 LINE L1 2226 2335 -172 27 0 0 0 chr2 154854539 154854566 -98402017 + AT_rich Low_complexity Low_complexity 1 27 0 24 0 0 0 chr2 154854622 154854646 -98401937 + AT_rich Low_complexity Low_complexity 1 24 0 248 277 59 67 chr2 154856497 154856616 -98399967 - MIR SINE MIR -67 141 24 23 33 0 0 chr2 154856659 154856689 -98399894 + AT_rich Low_complexity Low_complexity 1 30 0 7633 23 6 0 chr2 154858163 154859418 -98397165 - L1PA4 LINE L1 0 6155 4897 457 327 46 30 chr2 154861678 154861887 -98394696 - MIR SINE MIR -51 211 3 513 329 25 43 chr2 154862385 154862662 -98393921 - MLT1I LTR MaLR -47 362 91 1981 151 0 0 chr2 154863347 154863652 -98392931 - AluSx SINE Alu 0 305 1 252 328 0 0 chr2 154865339 154865403 -98391180 - MIR3 SINE MIR -28 180 117 21 0 0 0 chr2 154866228 154866249 -98390334 + AT_rich Low_complexity Low_complexity 1 21 0 604 85 54 27 chr2 154868163 154868497 -98388086 + (TA)n Simple_repeat Simple_repeat 1 343 0 2128 236 58 79 chr2 154868816 154869328 -98387255 - L1MC4 LINE L1 0 8042 7520 1556 163 0 83 chr2 154869328 154869629 -98386954 - AluJb SINE Alu -36 276 1 2128 236 58 79 chr2 154869629 154869995 -98386588 - L1MC4 LINE L1 -522 7520 7188 5846 111 12 8 chr2 154869995 154871647 -98384936 - L1PA13 LINE L1 0 6163 4497 2128 236 58 79 chr2 154871647 154871827 -98384756 - L1MC4 LINE L1 -854 7188 7006 1884 213 107 21 chr2 154872807 154873333 -98383250 - L1ME3A LINE L1 -62 6108 5538 371 22 0 0 chr2 154873517 154873563 -98383020 + L1PA6 LINE L1 6104 6149 -5 1248 219 123 19 chr2 154875879 154876330 -98380253 + MER39 LTR ERV1 6 707 0 225 259 35 0 chr2 154877136 154877194 -98379389 + MIR3 SINE MIR 144 203 -5 206 144 52 121 chr2 154878028 154878202 -98378381 + (ATTAG)n Simple_repeat Simple_repeat 4 165 0 969 202 22 44 chr2 154878233 154878461 -98378122 + MER58A DNA MER1_type 1 223 -1 385 153 0 0 chr2 154879814 154879873 -98376710 + MER34C LTR ERV1 36 94 -491 554 331 73 63 chr2 154879895 154880336 -98376247 - L2 LINE L2 -4 3268 2824 271 331 29 46 chr2 154880558 154880733 -98375850 + MIR SINE MIR 3 174 -88 206 204 23 23 chr2 154880713 154880757 -98375826 + L2 LINE L2 3210 3253 -19 * 1318 194 90 56 chr2 154882094 154882471 -98374112 - MLT1B LTR MaLR 0 390 1 27 29 0 0 chr2 154882600 154882634 -98373949 + AT_rich Low_complexity Low_complexity 1 34 0 2364 73 0 7 chr2 154883329 154883630 -98372953 + AluY SINE Alu 1 299 -12 23 54 0 0 chr2 154883866 154883903 -98372680 + AT_rich Low_complexity Low_complexity 1 37 0 445 320 89 38 chr2 154883998 154884314 -98372269 - L1ME4a LINE L1 -105 6016 5685 198 103 0 0 chr2 154884333 154884362 -98372221 + (TA)n Simple_repeat Simple_repeat 2 30 0 * 234 0 0 0 chr2 154884361 154884387 -98372196 + (GA)n Simple_repeat Simple_repeat 2 27 0 4331 147 48 10 chr2 154884387 154885179 -98371404 - Tigger3b DNA MER2_type -3 1228 407 29224 114 9 22 chr2 154885230 154885911 -98370672 - L1PA7 LINE L1 0 6469 5781 2361 89 23 0 chr2 154885911 154886213 -98370370 - AluY SINE Alu 0 311 3 29224 114 9 22 chr2 154886213 154891307 -98365276 - L1PA7 LINE L1 -688 5781 742 2294 187 12 0 chr2 154891307 154891724 -98364859 - Tigger3b DNA MER2_type -808 423 2 274 80 40 0 chr2 154891753 154891803 -98364780 + (TCTA)n Simple_repeat Simple_repeat 4 55 0 1723 185 91 67 chr2 154891903 154892396 -98364187 + L1MC3 LINE L1 5442 5946 -1839 2172 190 75 15 chr2 154892430 154892909 -98363674 + L1MC3 LINE L1 7070 7577 -208 299 315 37 56 chr2 154893344 154893506 -98363077 - MIR SINE MIR -68 194 36 25 31 0 0 chr2 154893536 154893568 -98363015 + AT_rich Low_complexity Low_complexity 1 32 0 272 291 20 34 chr2 154893858 154894006 -98362577 - L1ME LINE L1 -305 5865 5720 240 272 76 85 chr2 154896017 154896333 -98360250 + L1ME4a LINE L1 5774 6086 -35 14607 38 4 1 chr2 154897374 154900237 -98356346 - L1PA4 LINE L1 -6 6149 3284 23803 67 11 1 chr2 154901780 154905074 -98351509 - L1PA4 LINE L1 -2819 3327 1 1114 244 52 16 chr2 154905300 154905743 -98350840 - LTR37B LTR ERV1 -4 464 6 453 36 0 0 chr2 154905764 154905819 -98350764 + (TG)n Simple_repeat Simple_repeat 2 56 0 438 20 0 0 chr2 154906202 154906253 -98350330 + (TAAAA)n Simple_repeat Simple_repeat 5 55 0 329 231 19 0 chr2 154906440 154906544 -98350039 + (CATATA)n Simple_repeat Simple_repeat 6 111 0 2033 148 0 7 chr2 154906557 154906861 -98349722 + AluSx SINE Alu 1 302 -10 379 207 27 63 chr2 154906992 154907103 -98349480 - L2 LINE L2 -38 3275 3169 227 98 66 33 chr2 154907110 154907171 -98349412 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 314 296 161 12 chr2 154907424 154907667 -98348916 - MLT1K LTR MaLR -16 572 294 2617 198 4 2 chr2 154907770 154908270 -98348313 + L1PA10 LINE L1 8 508 -5367 842 154 20 0 chr2 154908270 154908419 -98348164 + L1PA10 LINE L1 717 868 -5007 * 18983 121 2 17 chr2 154908416 154911494 -98345089 + L1PA10 LINE L1 2509 5472 -974 3448 71 11 0 chr2 154911494 154911933 -98344650 - MLT2A1 LTR ERVL 0 444 1 18983 121 2 17 chr2 154911933 154912888 -98343695 + L1PA10 LINE L1 5472 6441 -5 707 230 109 4 chr2 154912964 154913221 -98343362 - MER69 DNA AcHobo -222 2304 2021 370 337 11 17 chr2 154913410 154913585 -98342998 - MER69 DNA AcHobo -774 452 279 253 378 0 0 chr2 154914322 154914441 -98342142 - LTR16C LTR ERVL 0 491 373 27 29 0 0 chr2 154914931 154914965 -98341618 + AT_rich Low_complexity Low_complexity 1 34 0 264 59 0 0 chr2 154916161 154916195 -98340388 + (CA)n Simple_repeat Simple_repeat 1 34 0 1820 158 6 35 chr2 154916438 154916770 -98339813 - AluJo SINE Alu 0 312 1 240 296 71 84 chr2 154916836 154917144 -98339439 + MLT1I LTR MaLR 106 409 0 623 231 89 5 chr2 154917222 154917425 -98339158 - HAL1b LINE L1 -739 609 390 1480 205 98 16 chr2 154917426 154917792 -98338791 + MSTD LTR MaLR 1 396 0 432 212 0 1 chr2 154917793 154917895 -98338688 + MSTD-int LTR MaLR 3 102 -1269 400 191 22 0 chr2 154917960 154918049 -98338534 + MSTD-int LTR MaLR 114 204 -1531 3529 242 88 39 chr2 154918063 154919124 -98337459 + MSTD-int LTR MaLR 623 1735 0 843 246 159 15 chr2 154919124 154919457 -98337126 + MSTD LTR MaLR 1 381 -15 22 0 0 0 chr2 154919509 154919531 -98337052 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr2 154919563 154919586 -98336997 + AT_rich Low_complexity Low_complexity 1 23 0 40940 32 22 1 chr2 154919586 154925608 -98330975 - L1PA2 LINE L1 -3 6152 2 442 313 114 20 chr2 154926602 154926706 -98329877 + MLT1J2 LTR MaLR 1 94 -356 1724 227 11 11 chr2 154926706 154927071 -98329512 - MLT1A1 LTR MaLR 0 365 1 442 313 114 20 chr2 154927071 154927263 -98329320 + MLT1J2 LTR MaLR 94 325 -125 2218 303 83 33 chr2 154927301 154927567 -98329016 - Charlie8 DNA MER1_type -520 1897 1646 1679 198 87 45 chr2 154927567 154928052 -98328531 + MLT1D LTR MaLR 1 505 0 2218 303 83 33 chr2 154928052 154929523 -98327060 - Charlie8 DNA MER1_type -771 1646 72 2129 126 0 10 chr2 154930378 154930679 -98325904 + AluSg SINE Alu 1 298 -12 38 51 0 0 chr2 154931115 154931174 -98325409 + AT_rich Low_complexity Low_complexity 1 59 0 21 57 0 0 chr2 154931240 154931275 -98325308 + AT_rich Low_complexity Low_complexity 1 35 0 26 30 0 0 chr2 154931481 154931514 -98325069 + AT_rich Low_complexity Low_complexity 1 33 0 526 274 68 52 chr2 154932624 154932931 -98323652 + L1MEd LINE L1 779 1090 -5029 228 200 35 0 chr2 154932934 154933019 -98323564 + (TA)n Simple_repeat Simple_repeat 2 89 0 398 272 24 0 chr2 154933307 154933432 -98323151 + HAL1 LINE L1 1427 1554 -953 1910 141 3 0 chr2 154933502 154933785 -98322798 - AluJb SINE Alu -26 286 3 240 351 110 26 chr2 154933831 154934059 -98322524 + L2 LINE L2 2573 2819 -495 294 232 105 0 chr2 154934066 154934161 -98322422 - MER5B DNA MER1_type -7 171 67 368 310 70 12 chr2 154934206 154934448 -98322135 + L2 LINE L2 2809 3064 -208 1942 260 72 9 chr2 154935918 154936476 -98320107 - MLT1E LTR MaLR 0 593 1 2537 60 0 0 chr2 154936650 154936951 -98319632 - AluY SINE Alu -10 301 1 210 71 0 0 chr2 154938624 154938652 -98317931 + (GA)n Simple_repeat Simple_repeat 1 28 0 1603 153 55 7 chr2 154939434 154939742 -98316841 - L1PA16 LINE L1 0 6166 5844 2692 119 16 0 chr2 154939893 154940323 -98316260 - L1MA5A LINE L1 0 6297 5861 679 112 0 0 chr2 154940323 154940430 -98316153 + L1MA5A LINE L1 5683 5789 -508 429 219 0 0 chr2 154940435 154940554 -98316029 + (TA)n Simple_repeat Simple_repeat 2 120 0 511 83 10 94 chr2 154940554 154940650 -98315933 + L1MA5A LINE L1 5782 5869 -428 35 24 0 0 chr2 154940988 154941030 -98315553 + AT_rich Low_complexity Low_complexity 1 42 0 3037 228 42 17 chr2 154941131 154942062 -98314521 + L1MC4a LINE L1 6855 7808 0 383 270 0 80 chr2 154942206 154942343 -98314240 + L2 LINE L2 3187 3312 -1 2439 93 0 0 chr2 154943745 154944056 -98312527 - AluSq SINE Alu -2 311 1 737 295 68 4 chr2 154944143 154944377 -98312206 - MIR SINE MIR -1 261 13 214 147 0 0 chr2 154944461 154944495 -98312088 + (CAGAG)n Simple_repeat Simple_repeat 3 36 0 1810 184 0 7 chr2 154946071 154946424 -98310159 + AluJo SINE Alu 8 358 0 403 142 6 0 chr2 154946925 154947021 -98309562 - L1M LINE L1 -821 5325 5236 12183 228 59 22 chr2 154947971 154949155 -98307428 - L1MA9 LINE L1 -9 6367 5229 180 0 0 0 chr2 154949155 154949175 -98307408 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 12183 228 59 22 chr2 154949175 154952282 -98304301 - L1MA9 LINE L1 -1147 5229 1931 605 177 49 18 chr2 154952282 154952446 -98304137 - L1MB4 LINE L1 -2 6178 6010 12183 228 59 22 chr2 154952446 154954451 -98302132 - L1MA9 LINE L1 -4445 1931 2 319 244 34 92 chr2 154954760 154954879 -98301704 - MIR3 SINE MIR -6 202 91 335 279 284 5 chr2 154955069 154955266 -98301317 - MIR SINE MIR -9 253 2 1005 249 92 3 chr2 154956202 154956507 -98300076 - L1ME1 LINE L1 -76 6090 5759 22 0 0 0 chr2 154957107 154957129 -98299454 + AT_rich Low_complexity Low_complexity 1 22 0 1782 236 70 22 chr2 154957193 154957595 -98298988 - L1ME1 LINE L1 -440 5726 5345 14279 102 12 7 chr2 154957595 154960511 -98296072 - L1PA8 LINE L1 -3 6169 3252 1782 236 70 22 chr2 154960511 154961024 -98295559 - L1ME1 LINE L1 -821 5345 4774 1570 181 4 4 chr2 154961100 154961376 -98295207 - AluJb SINE Alu -1 311 36 2937 201 16 0 chr2 154961392 154961945 -98294638 + MER68 LTR ERV1 1 562 0 183 42 0 0 chr2 154964605 154964629 -98291954 + (T)n Simple_repeat Simple_repeat 1 24 0 338 226 34 28 chr2 154965065 154965211 -98291372 - L1ME LINE L1 -338 5783 5652 2013 129 3 25 chr2 154965215 154965564 -98291019 - AluSx SINE Alu 0 342 1 728 254 83 62 chr2 154965567 154965953 -98290630 - L1ME LINE L1 -458 5663 5270 660 273 115 0 chr2 154966650 154966859 -98289724 - MIR SINE MIR -21 241 9 2420 69 7 7 chr2 154967175 154967479 -98289104 + AluSc SINE Alu 1 304 -5 2803 10 0 3 chr2 154968313 154968625 -98287958 - AluY SINE Alu 0 311 1 565 284 99 33 chr2 154969157 154969400 -98287183 + LTR16A LTR ERVL 179 437 -13 3004 290 56 48 chr2 154969410 154970794 -98285789 + ERVL LTR ERVL 1 1395 -3601 494 261 97 18 chr2 154970794 154970959 -98285624 - MER5B DNA MER1_type 0 178 1 886 283 178 46 chr2 154970976 154971453 -98285130 + ERVL LTR ERVL 1406 1945 -3051 1019 346 32 3 chr2 154971461 154971805 -98284778 + ERVL LTR ERVL 2734 3087 -1909 1766 181 44 44 chr2 154972477 154972863 -98283720 - MLT1B LTR MaLR -4 386 1 729 319 95 52 chr2 154972880 154973381 -98283202 + ERVL LTR ERVL 3885 4444 -1259 359 346 82 4 chr2 154973632 154973901 -98282682 + ERVL LTR ERVL 4701 4990 -664 180 97 0 0 chr2 154974052 154974083 -98282500 + (TAGA)n Simple_repeat Simple_repeat 4 34 0 417 321 72 10 chr2 154974534 154974743 -98281840 + LTR16A LTR ERVL 220 441 -9 231 188 0 0 chr2 154975044 154975092 -98281491 + (TG)n Simple_repeat Simple_repeat 2 49 0 2345 82 0 12 chr2 154975124 154975452 -98281131 - L1PA13 LINE L1 -19 6144 5821 198 342 79 0 chr2 154976532 154976646 -98279937 - L2 LINE L2 -18 3254 3132 518 301 71 17 chr2 154976675 154976914 -98279669 + MIR SINE MIR 11 262 0 2534 63 0 0 chr2 154977438 154977740 -98278843 + AluY SINE Alu 1 302 -9 2223 118 3 0 chr2 154978177 154978481 -98278102 + AluSx SINE Alu 1 305 -7 1701 286 66 46 chr2 154979073 154980656 -98275927 - L1ME3A LINE L1 -2 6168 4557 244 328 15 0 chr2 154980871 154981002 -98275581 - L1ME3A LINE L1 -1796 4350 4218 1495 291 97 39 chr2 154981044 154981895 -98274688 + L2 LINE L2 2401 3313 0 181 225 0 0 chr2 154981952 154981992 -98274591 - L2 LINE L2 -219 3053 3014 226 121 0 0 chr2 154982364 154982397 -98274186 + U2 snRNA snRNA 1 33 -155 366 337 33 11 chr2 154982908 154983092 -98273491 - MIR SINE MIR -55 207 20 2085 134 3 10 chr2 154983562 154983875 -98272708 - AluSq SINE Alu -2 311 1 186 350 13 83 chr2 154984582 154984679 -98271904 - L3 LINE CR1 -1 1576 1493 1978 145 26 3 chr2 154984679 154984982 -98271601 - AluJb SINE Alu -2 310 1 186 350 13 83 chr2 154984982 154985041 -98271542 - L3 LINE CR1 -84 1493 1431 391 341 46 57 chr2 154985092 154985529 -98271054 - L2 LINE L2 -340 2974 2543 1001 222 20 25 chr2 154986271 154986474 -98270109 + MER58A DNA MER1_type 10 211 -13 745 191 0 0 chr2 154986499 154986630 -98269953 + AluJb SINE Alu 174 304 -8 521 296 158 27 chr2 154987541 154987964 -98268619 + L1ME3A LINE L1 5458 5929 -237 1739 209 45 0 chr2 154987967 154988326 -98268257 + MLT2D LTR ERVL 1 375 -39 383 335 59 24 chr2 154988756 154988926 -98267657 + L1MC/D LINE L1 5429 5604 -517 12079 32 6 1 chr2 154989705 154991930 -98264653 - L1PA4 LINE L1 0 6155 3920 5135 53 0 9 chr2 154991930 154992603 -98263980 + L1PA4 LINE L1 3256 3922 -2224 1972 160 41 36 chr2 154993660 154994024 -98262559 - MLT1B LTR MaLR 0 390 22 2041 127 43 27 chr2 154994024 154994393 -98262190 - THE1C LTR MaLR 0 375 1 1972 160 41 36 chr2 154994393 154994415 -98262168 - MLT1B LTR MaLR -368 22 2 475 267 138 55 chr2 154994693 154995019 -98261564 - L1ME3A LINE L1 -33 6137 5785 * 1740 210 30 5 chr2 154995011 154995378 -98261205 - L1ME1 LINE L1 -50 6116 5741 359 259 26 9 chr2 154995498 154995614 -98260969 - L1MEc LINE L1 -2949 3197 3080 1358 234 110 14 chr2 154995706 154996269 -98260314 - Zaphod DNA AcHobo -133 3898 3282 1748 197 49 6 chr2 154996286 154996961 -98259622 + L1M4 LINE L1 4959 5663 -515 679 234 90 22 chr2 154997705 154998104 -98258479 - MER113 DNA MER1_type? -72 449 3 352 296 22 30 chr2 154999337 154999472 -98257111 + MIR SINE MIR 16 149 -113 286 166 2 0 chr2 155000634 155000697 -98255886 - L1MEc LINE L1 -3945 2235 2138 1189 226 145 3 chr2 155000719 155001370 -98255213 - L1MD2 LINE L1 -16 6326 5459 4205 162 47 16 chr2 155001380 155002151 -98254432 - L1MB1 LINE L1 -1 6167 5366 2093 130 3 0 chr2 155002151 155002443 -98254140 - AluSg SINE Alu -17 293 1 4205 162 47 16 chr2 155002443 155002523 -98254060 - L1MB1 LINE L1 -802 5366 5290 2114 212 62 34 chr2 155002506 155003342 -98253241 - L1MD2 LINE L1 -742 5483 4621 * 10401 95 10 1 chr2 155003570 155005852 -98250731 - L1PA7 LINE L1 -3 6151 3871 1832 141 57 43 chr2 155005866 155006236 -98250347 - THE1C LTR MaLR 0 375 1 611 289 85 51 chr2 155006329 155007276 -98249307 - L1MD2 LINE L1 -4593 1717 711 2343 100 3 0 chr2 155007714 155008015 -98248568 - AluSp SINE Alu -11 302 1 1990 157 120 5 chr2 155008981 155009364 -98247219 + MSTA LTR MaLR 1 427 -1 26 0 0 0 chr2 155010671 155010697 -98245886 + AT_rich Low_complexity Low_complexity 1 26 0 240 378 33 20 chr2 155011202 155011353 -98245230 + MIR3 SINE MIR 10 162 -46 234 0 0 0 chr2 155011604 155011630 -98244953 + (T)n Simple_repeat Simple_repeat 1 26 0 256 324 19 19 chr2 155012815 155012923 -98243660 - MER94 DNA DNA -16 118 11 212 274 0 0 chr2 155063436 155063509 -98193074 + G-rich Low_complexity Low_complexity 1 73 0 389 227 94 39 chr2 155063721 155063849 -98192734 - L2 LINE L2 -45 3268 3134 2141 160 54 29 chr2 155063942 155064294 -98192289 + L1P4 LINE L1 4823 5165 -1001 2301 95 3 3 chr2 155064294 155064600 -98191983 + AluY SINE Alu 1 306 -5 2141 160 54 29 chr2 155064600 155064945 -98191638 + L1P4 LINE L1 5165 5532 -634 267 310 142 9 chr2 155065900 155066013 -98190570 + L2 LINE L2 3186 3313 0 213 39 0 0 chr2 155067598 155067624 -98188959 + (A)n Simple_repeat Simple_repeat 1 26 0 280 330 107 14 chr2 155069404 155069619 -98186964 + L2 LINE L2 3006 3240 -73 916 320 113 31 chr2 155069738 155070253 -98186330 - L3 LINE CR1 -46 1531 975 1378 186 62 24 chr2 155070535 155070826 -98185757 - AluJo SINE Alu -10 302 1 202 150 25 0 chr2 155071015 155071055 -98185528 + A-rich Low_complexity Low_complexity 2 42 0 43 47 0 0 chr2 155071393 155071457 -98185126 + AT_rich Low_complexity Low_complexity 1 64 0 1305 268 63 76 chr2 155071505 155071589 -98184994 - HAL1 LINE L1 -78 2429 2345 2510 158 21 5 chr2 155071589 155072008 -98184575 - MSTB LTR MaLR 0 426 1 1305 268 63 76 chr2 155072008 155072231 -98184352 - HAL1 LINE L1 -162 2345 2121 2144 114 0 0 chr2 155072231 155072520 -98184063 - AluSg1 SINE Alu -20 289 1 1305 268 63 76 chr2 155072520 155072586 -98183997 - HAL1 LINE L1 -386 2121 2056 1942 119 52 7 chr2 155072586 155072872 -98183711 - AluSx SINE Alu -13 299 1 1305 268 63 76 chr2 155072872 155073038 -98183545 - HAL1 LINE L1 -451 2056 1889 627 94 31 0 chr2 155073038 155073134 -98183449 - L1MA8 LINE L1 -6 6285 6187 1305 268 63 76 chr2 155073134 155073406 -98183177 - HAL1 LINE L1 -618 1889 1626 2228 103 3 3 chr2 155073406 155073708 -98182875 - AluSc SINE Alu -7 302 1 1305 268 63 76 chr2 155073708 155073843 -98182740 - HAL1 LINE L1 -881 1626 1491 261 261 0 31 chr2 155073868 155073933 -98182650 + polypyrimidine Low_complexity Low_complexity 3 65 0 1327 302 75 55 chr2 155073933 155075126 -98181457 - HAL1 LINE L1 -1042 1465 248 474 147 55 0 chr2 155075209 155075318 -98181265 - MER53 DNA DNA -53 136 22 24 0 0 0 chr2 155075436 155075460 -98181123 + AT_rich Low_complexity Low_complexity 1 24 0 395 211 89 0 chr2 155076011 155076101 -98180482 + MER4A LTR ERV1 1 98 -566 1763 125 157 80 chr2 155076101 155076476 -98180107 + MER4A LTR ERV1 261 664 0 22 35 0 0 chr2 155078984 155079013 -98177570 + AT_rich Low_complexity Low_complexity 1 29 0 1962 138 7 3 chr2 155079408 155079706 -98176877 + MER7A DNA MER2_type 49 345 -1 311 243 62 102 chr2 155079822 155080225 -98176358 - L1M4 LINE L1 -2713 3433 3047 2676 135 19 0 chr2 155080405 155080826 -98175757 + L1PA16 LINE L1 5695 6123 -43 222 327 84 0 chr2 155080842 155080949 -98175634 - MIR SINE MIR -84 178 63 414 268 126 43 chr2 155084066 155084297 -98172286 - LTR16A1 LTR ERVL 0 457 208 1915 136 0 34 chr2 155084724 155085044 -98171539 + AluSx SINE Alu 1 310 0 357 306 22 55 chr2 155085539 155085722 -98170861 + MIR SINE MIR 20 196 -66 41839 57 5 1 chr2 155085874 155091997 -98164586 + L1PA5 LINE L1 2 6150 -4 26 30 0 0 chr2 155092520 155092553 -98164030 + AT_rich Low_complexity Low_complexity 1 33 0 896 201 48 82 chr2 155093323 155093701 -98162882 + L1ME LINE L1 3653 4017 -2129 2629 52 0 0 chr2 155093710 155094019 -98162564 + AluY SINE Alu 3 311 0 4148 245 58 104 chr2 155094220 155094513 -98162070 + L1MDa LINE L1 119 424 -6116 396 0 0 0 chr2 155094513 155094557 -98162026 + (CA)n Simple_repeat Simple_repeat 2 45 0 4148 245 58 104 chr2 155094557 155096778 -98159805 + L1MDa LINE L1 424 2516 -4024 606 186 22 147 chr2 155096863 155097139 -98159444 + L1ME LINE L1 5201 5443 -721 3589 186 39 31 chr2 155097154 155097928 -98158655 + L1MC3 LINE L1 6686 7465 -320 384 311 44 17 chr2 155097941 155098121 -98158462 - L2 LINE L2 -281 3032 2848 * 812 171 89 49 chr2 155098112 155098358 -98158225 + MER5C DNA MER1_type 12 267 -57 417 239 46 18 chr2 155098441 155098550 -98158033 - MER5A DNA MER1_type -77 112 1 * 776 283 21 28 chr2 155098550 155098822 -98157761 - L2 LINE L2 -626 2688 2419 539 274 66 24 chr2 155100313 155100525 -98156058 + MIR SINE MIR 36 256 -6 2007 218 71 133 chr2 155102095 155102408 -98154175 + L1MEc LINE L1 40 371 -6025 1557 158 90 0 chr2 155102408 155102536 -98154047 + AluSx SINE Alu 1 116 -196 185 0 40 0 chr2 155102536 155102561 -98154022 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1557 158 90 0 chr2 155102561 155102711 -98153872 + AluSx SINE Alu 116 304 -8 2007 218 71 133 chr2 155102711 155103391 -98153192 + L1MEc LINE L1 371 972 -5424 2883 297 71 14 chr2 155103400 155104656 -98151927 + L2 LINE L2 1760 3083 -230 296 286 148 21 chr2 155104706 155104895 -98151688 - L1MC/D LINE L1 -2144 5664 5452 24 53 0 0 chr2 155104896 155104934 -98151649 + AT_rich Low_complexity Low_complexity 1 38 0 354 72 93 0 chr2 155105177 155105274 -98151309 + (TA)n Simple_repeat Simple_repeat 2 107 0 285 311 66 9 chr2 155105422 155105528 -98151055 + MIR SINE MIR 92 203 -59 239 256 37 12 chr2 155105927 155106009 -98150574 - L1ME2 LINE L1 -27 6137 6054 1875 295 74 52 chr2 155106073 155107667 -98148916 - L1ME3A LINE L1 -133 6106 4548 5844 117 7 0 chr2 155107667 155108759 -98147824 + L1PA13 LINE L1 5047 6144 -19 1875 295 74 52 chr2 155108759 155110049 -98146534 - L1ME3A LINE L1 -1691 4548 3151 2268 97 3 10 chr2 155110049 155110360 -98146223 - AluSg SINE Alu -1 309 1 1875 295 74 52 chr2 155110360 155110585 -98145998 - L1ME3A LINE L1 -3088 3151 2932 380 306 98 34 chr2 155110589 155111030 -98145553 - L1ME3A LINE L1 -3568 2647 2179 23 0 0 0 chr2 155111305 155111328 -98145255 + AT_rich Low_complexity Low_complexity 1 23 0 448 329 38 54 chr2 155111386 155111749 -98144834 - L1ME3A LINE L1 -829 1747 1517 248 244 34 119 chr2 155111818 155111851 -98144732 - LTR16C LTR ERVL -2 489 455 2879 3 0 0 chr2 155111851 155112161 -98144422 + AluYa5 SINE Alu 1 310 -1 248 244 34 119 chr2 155112161 155112303 -98144280 - LTR16C LTR ERVL -36 455 329 516 294 37 52 chr2 155112519 155112915 -98143668 - L1MEd LINE L1 -4890 1315 956 643 185 34 0 chr2 155113201 155113320 -98143263 - FLAM_A SINE Alu -10 132 10 1521 225 37 48 chr2 155115235 155115719 -98140864 + L1ME1 LINE L1 5683 6161 -5 559 343 14 9 chr2 155116540 155116756 -98139827 - MIR SINE MIR -44 218 2 332 343 36 7 chr2 155117123 155117260 -98139323 - MIR SINE MIR -117 145 5 22 35 0 0 chr2 155117665 155117694 -98138889 + AT_rich Low_complexity Low_complexity 1 29 0 2254 56 30 0 chr2 155117953 155118223 -98138360 - AluY SINE Alu -13 298 21 3962 223 61 36 chr2 155118380 155120225 -98136358 + L1MD2 LINE L1 248 2045 -4520 2608 53 0 0 chr2 155120225 155120527 -98136056 - AluY SINE Alu -9 302 1 3962 223 61 36 chr2 155120527 155121045 -98135538 + L1MD2 LINE L1 2045 2549 -4016 2205 110 0 0 chr2 155121045 155121353 -98135230 + AluY SINE Alu 1 308 -3 3962 223 61 36 chr2 155121353 155121446 -98135137 + L1MD2 LINE L1 2549 6515 -50 6162 151 61 36 chr2 155121461 155122189 -98134394 + L1MA4 LINE L1 3818 4526 -1774 2342 90 3 0 chr2 155122189 155122489 -98134094 + AluSp SINE Alu 1 301 -12 6162 151 61 36 chr2 155122489 155122897 -98133686 + L1MA4 LINE L1 4526 4922 -1378 3685 64 0 0 chr2 155122897 155123367 -98133216 + L1PA7 LINE L1 5677 6146 -8 6162 151 61 36 chr2 155123367 155124352 -98132231 + L1MA4 LINE L1 4922 6033 -267 2218 112 0 0 chr2 155124352 155124648 -98131935 - AluSx SINE Alu -16 296 1 6162 151 61 36 chr2 155124648 155124919 -98131664 + L1MA4 LINE L1 6033 6296 -4 274 71 54 36 chr2 155124922 155124978 -98131605 + L1MB2 LINE L1 6115 6171 0 1493 251 96 20 chr2 155125004 155125387 -98131196 + L1MD2 LINE L1 5818 6249 -110 1970 239 26 73 chr2 155125387 155126044 -98130539 - MLT1E2 LTR MaLR 0 626 1 1493 251 96 20 chr2 155126044 155126162 -98130421 + L1MD2 LINE L1 6249 6357 -2 356 322 82 44 chr2 155126174 155126357 -98130226 + L1MEc LINE L1 1627 1816 -4580 401 293 159 13 chr2 155126380 155126827 -98129756 + L1MEc LINE L1 1883 2394 -4002 1996 138 10 16 chr2 155126827 155127138 -98129445 + AluSq SINE Alu 1 309 -4 6965 56 13 0 chr2 155127393 155128837 -98127746 - L1PA7 LINE L1 -1 6153 4693 315 0 0 0 chr2 155128837 155128872 -98127711 + (TTG)n Simple_repeat Simple_repeat 2 36 0 6965 56 13 0 chr2 155128872 155129126 -98127457 - L1PA7 LINE L1 -1461 4693 4444 866 284 58 36 chr2 155129152 155129785 -98126798 + L1MEc LINE L1 2520 3166 -3049 493 304 125 56 chr2 155130461 155130659 -98125924 - L2 LINE L2 0 3313 3130 2389 91 3 3 chr2 155130659 155130967 -98125616 + AluSp SINE Alu 1 308 -5 493 304 125 56 chr2 155130967 155131467 -98125116 - L2 LINE L2 -183 3130 2577 257 355 91 21 chr2 155132564 155132750 -98123833 - MIR SINE MIR -34 228 30 300 331 133 6 chr2 155133087 155133253 -98123330 + MIR SINE MIR 50 236 -26 804 320 98 14 chr2 155133376 155133723 -98122860 - LTR16C LTR ERVL -43 448 73 2282 98 10 0 chr2 155133844 155134140 -98122443 + AluSq SINE Alu 1 299 -14 314 232 29 0 chr2 155134316 155134385 -98122198 + L2 LINE L2 3234 3304 -9 309 365 100 8 chr2 155135792 155136033 -98120550 - L2 LINE L2 -498 2816 2554 795 304 19 5 chr2 155136380 155136587 -98119996 + MIR SINE MIR 32 241 -21 238 252 45 81 chr2 155136613 155136724 -98119859 + MIR SINE MIR 156 262 0 380 284 26 0 chr2 155138052 155138182 -98118401 - MIR SINE MIR -55 207 72 243 0 0 0 chr2 155138661 155138688 -98117895 + (CA)n Simple_repeat Simple_repeat 2 28 0 762 258 47 37 chr2 155139371 155139634 -98116949 - L2 LINE L2 -862 2452 2184 1172 198 25 110 chr2 155139634 155140033 -98116550 + MLT1A1 LTR MaLR 1 365 0 762 258 47 37 chr2 155140033 155140067 -98116516 - L2 LINE L2 -1130 2184 2152 354 248 73 0 chr2 155140253 155140362 -98116221 + L1ME4a LINE L1 6004 6120 -1 1586 163 3 56 chr2 155141272 155141560 -98115023 + AluJb SINE Alu 2 274 -38 288 287 37 37 chr2 155144004 155144112 -98112471 - MIR SINE MIR -108 154 47 318 263 12 0 chr2 155144133 155144213 -98112370 + Charlie7 DNA MER1_type 21 101 -2511 560 249 149 50 chr2 155144298 155144640 -98111943 + Charlie7 DNA MER1_type 252 627 -1985 436 250 102 40 chr2 155144668 155145068 -98111515 + Charlie7 DNA MER1_type 2176 2600 -12 216 0 0 0 chr2 155145466 155145490 -98111093 + (A)n Simple_repeat Simple_repeat 1 24 0 380 303 79 24 chr2 155146173 155146338 -98110245 + MIR SINE MIR 3 176 -86 2058 173 110 5 chr2 155146569 155146986 -98109597 + LOR1b LTR ERV1 1 461 0 222 118 0 0 chr2 155147645 155147679 -98108904 + (A)n Simple_repeat Simple_repeat 1 34 0 272 248 20 69 chr2 155149308 155149409 -98107174 - MIR SINE MIR -16 246 151 1707 208 58 121 chr2 155149589 155150326 -98106257 + LTR8A LTR ERV1 34 724 -3 2030 181 40 67 chr2 155150681 155151161 -98105422 + MLT1C LTR MaLR 1 467 0 589 296 77 17 chr2 155151965 155152198 -98104385 - MIR SINE MIR -14 248 2 188 328 0 0 chr2 155152882 155152940 -98103643 - MIR3 SINE MIR -11 197 140 259 352 31 16 chr2 155153044 155153172 -98103411 + L2 LINE L2 3141 3270 -2 606 211 18 12 chr2 155155305 155155471 -98101112 - MER104 DNA Tc2 -6 174 8 654 305 93 19 chr2 155155880 155156149 -98100434 - L2 LINE L2 -1 3271 2983 323 318 173 0 chr2 155156457 155156567 -98100016 - MIR SINE MIR -132 130 2 297 109 0 0 chr2 155158054 155158100 -98098483 + (CA)n Simple_repeat Simple_repeat 2 47 0 185 358 123 30 chr2 155159362 155160029 -98096554 - L2 LINE L2 -875 2439 1711 336 24 0 0 chr2 155161642 155161683 -98094900 + (TG)n Simple_repeat Simple_repeat 2 42 0 453 297 79 18 chr2 155164052 155164217 -98092366 + MER115 DNA AcHobo 35 209 -484 2370 105 0 3 chr2 155164225 155164538 -98092045 - AluSq SINE Alu -1 312 1 197 333 14 14 chr2 155164680 155164752 -98091831 - MIR3 SINE MIR -3 205 134 523 280 5 26 chr2 155164814 155165007 -98091576 - MER46C DNA MER2_type -1 337 149 2210 143 16 0 chr2 155165012 155165389 -98091194 + MLT1B LTR MaLR 8 390 0 270 163 175 12 chr2 155165402 155165482 -98091101 - MER46C DNA MER2_type -211 127 35 406 250 24 59 chr2 155166434 155166571 -98090012 - MIR SINE MIR -63 145 4 1279 233 143 23 chr2 155166935 155167368 -98089215 + MLT1D LTR MaLR 21 505 0 234 136 0 0 chr2 155167591 155167635 -98088948 + (ATG)n Simple_repeat Simple_repeat 2 45 0 22 0 0 0 chr2 155167748 155167770 -98088813 + AT_rich Low_complexity Low_complexity 1 22 0 6431 76 38 4 chr2 155167877 155168866 -98087717 - L1PA10 LINE L1 -4 6164 5161 185 206 0 0 chr2 155168891 155168925 -98087658 - L2 LINE L2 -15 3298 3265 2245 112 3 3 chr2 155169238 155169543 -98087040 - AluSg SINE Alu -5 305 1 216 0 0 0 chr2 155170049 155170073 -98086510 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 479 299 75 0 chr2 155170173 155170347 -98086236 - MIR SINE MIR 0 262 76 336 287 0 0 chr2 155170390 155170477 -98086106 - MIR SINE MIR -4 258 172 262 298 75 0 chr2 155171066 155171160 -98085423 + L3 LINE CR1 366 466 -1111 184 366 99 0 chr2 155171993 155172124 -98084459 + L3 LINE CR1 1254 1397 -180 248 333 115 10 chr2 155172201 155172297 -98084286 + MIR SINE MIR 20 125 -83 21 0 0 0 chr2 155172732 155172753 -98083830 + AT_rich Low_complexity Low_complexity 1 21 0 347 266 16 99 chr2 155175020 155175212 -98081371 - L2 LINE L2 -7 3306 3131 1808 171 46 3 chr2 155175364 155175733 -98080850 - L1 LINE L1 -972 5174 4790 1360 141 47 25 chr2 155175735 155176012 -98080571 - L1 LINE L1 -1274 4872 4590 1137 138 59 5 chr2 155176012 155176311 -98080272 + L1MA6 LINE L1 5177 5489 -743 2534 40 13 3 chr2 155176327 155176627 -98079956 + AluY SINE Alu 1 303 -8 274 264 0 11 chr2 155176630 155176721 -98079862 - L1MC4 LINE L1 -1339 6703 6614 339 130 0 0 chr2 155176721 155176775 -98079808 + (TA)n Simple_repeat Simple_repeat 2 55 0 207 0 0 0 chr2 155176775 155176798 -98079785 + (CA)n Simple_repeat Simple_repeat 2 24 0 4411 150 27 3 chr2 155176798 155177576 -98079007 + L1MA6 LINE L1 5495 6291 -9 22 80 0 0 chr2 155177580 155177630 -98078953 + AT_rich Low_complexity Low_complexity 1 50 0 1542 82 0 5 chr2 155178746 155178942 -98077641 + AluY SINE Alu 104 298 -13 423 251 138 12 chr2 155179355 155179522 -98077061 + MIR SINE MIR 21 208 -54 560 252 68 52 chr2 155179918 155180168 -98076415 + MIR SINE MIR 9 262 0 203 368 44 0 chr2 155180204 155180272 -98076311 + MIR SINE MIR 25 95 -167 504 299 126 43 chr2 155180283 155180514 -98076069 - MIR SINE MIR -1 261 12 33 0 0 0 chr2 155180836 155180869 -98075714 + AT_rich Low_complexity Low_complexity 1 33 0 189 325 0 0 chr2 155182503 155182543 -98074040 - L2 LINE L2 -107 3165 3126 354 335 33 47 chr2 155182717 155182932 -98073651 + L1MC/D LINE L1 5578 5789 -2019 343 244 44 88 chr2 155183045 155183126 -98073457 + HAL1b LINE L1 1188 1260 -88 1979 153 3 0 chr2 155183126 155183420 -98073163 - AluSx SINE Alu -17 295 1 343 244 44 88 chr2 155183420 155183498 -98073085 + HAL1b LINE L1 1260 1340 -8 430 342 87 38 chr2 155183576 155184154 -98072429 + L2 LINE L2 2697 3313 0 23 0 0 0 chr2 155184756 155184779 -98071804 + AT_rich Low_complexity Low_complexity 1 23 0 440 172 0 11 chr2 155184807 155184900 -98071683 + (CA)n Simple_repeat Simple_repeat 1 92 0 578 230 63 0 chr2 155187161 155187287 -98069296 + L2 LINE L2 3139 3272 0 874 290 85 19 chr2 155187435 155187801 -98068782 + MLT1J2 LTR MaLR 43 432 -18 2483 167 31 4 chr2 155190187 155190642 -98065941 - MLT1C LTR MaLR 0 467 1 1635 249 88 34 chr2 155191320 155191805 -98064778 + MLT1E2 LTR MaLR 1 525 -101 2140 134 0 3 chr2 155191805 155192112 -98064471 - AluSx SINE Alu -6 306 1 1635 249 88 34 chr2 155192112 155192220 -98064363 + MLT1E2 LTR MaLR 525 626 0 268 297 94 61 chr2 155192266 155192478 -98064105 - MIR SINE MIR -19 243 25 670 317 35 9 chr2 155192947 155193174 -98063409 - MIR SINE MIR -12 250 18 183 202 48 167 chr2 155193176 155193260 -98063323 + L2 LINE L2 3192 3265 -48 243 0 0 0 chr2 155193311 155193338 -98063245 + (A)n Simple_repeat Simple_repeat 1 27 0 274 321 123 0 chr2 155193821 155193927 -98062656 + L2 LINE L2 3191 3309 -4 204 40 0 0 chr2 155194076 155194101 -98062482 + (A)n Simple_repeat Simple_repeat 1 25 0 1109 293 60 24 chr2 155194106 155194652 -98061931 - MLT1L LTR MaLR -34 581 16 21 0 0 0 chr2 155194965 155194986 -98061597 + AT_rich Low_complexity Low_complexity 1 21 0 6421 93 41 6 chr2 155196547 155197517 -98059066 - L1MA2 LINE L1 0 6304 5300 2253 126 0 0 chr2 155197675 155197984 -98058599 + AluSx SINE Alu 3 311 -1 816 211 6 11 chr2 155198203 155198383 -98058200 + MIR SINE MIR 77 255 -7 261 0 0 0 chr2 155198614 155198643 -98057940 + (A)n Simple_repeat Simple_repeat 1 29 0 514 257 123 55 chr2 155198949 155199499 -98057084 - MLT1F LTR MaLR 0 555 1 510 311 90 38 chr2 155199687 155200376 -98056207 + L1ME4a LINE L1 3214 3938 -2208 236 336 144 0 chr2 155200527 155200673 -98055910 + MLT1H LTR MaLR 80 246 -303 301 285 13 70 chr2 155200701 155200859 -98055724 + L1ME4a LINE L1 4054 4202 -1944 265 262 69 0 chr2 155201073 155201182 -98055401 + L1ME4a LINE L1 5740 5856 -314 465 281 150 6 chr2 155201209 155201369 -98055214 + MIR SINE MIR 79 261 -1 326 317 35 7 chr2 155201688 155201830 -98054753 + L1ME4a LINE L1 5969 6114 -7 260 315 31 15 chr2 155203040 155203170 -98053413 + MLT1J1 LTR MaLR 62 193 -253 307 208 113 8 chr2 155203216 155203336 -98053247 + MLT1J2 LTR MaLR 268 402 -12 2952 153 21 69 chr2 155203379 155203887 -98052696 + MLT2B3 LTR ERVL 1 479 -75 303 28 0 0 chr2 155203887 155203923 -98052660 + (TG)n Simple_repeat Simple_repeat 1 36 0 2952 153 21 69 chr2 155203923 155203996 -98052587 + MLT2B3 LTR ERVL 479 554 0 365 270 141 32 chr2 155205530 155205715 -98050868 - MIR3 SINE MIR -2 206 2 683 239 86 0 chr2 155205895 155206058 -98050525 + MIR SINE MIR 64 240 -22 646 248 61 32 chr2 155207348 155207594 -98048989 + L1ME4a LINE L1 5409 5661 -460 303 271 0 24 chr2 155207599 155207684 -98048899 + L1MC4 LINE L1 6614 6696 -1346 435 277 46 5 chr2 155207699 155207894 -98048689 + L1ME4a LINE L1 5713 5915 -206 8068 89 10 0 chr2 155208194 155211104 -98045479 + L1PA7 LINE L1 3151 6150 -4 407 305 113 11 chr2 155211226 155211403 -98045180 + MIR SINE MIR 52 246 -16 420 325 127 0 chr2 155211414 155211580 -98045003 - MIR SINE MIR -19 243 57 345 47 0 0 chr2 155211869 155211912 -98044671 + (TG)n Simple_repeat Simple_repeat 2 44 0 1671 156 116 3 chr2 155212591 155212919 -98043664 - MLT1A1 LTR MaLR 0 365 1 1326 238 27 0 chr2 155213261 155213597 -98042986 - L1MA9 LINE L1 -886 5260 4916 * 4461 171 43 20 chr2 155213594 155214571 -98042012 + L1MA9 LINE L1 5276 6274 -38 302 292 43 43 chr2 155216986 155217147 -98039436 - MIR SINE MIR -10 252 92 4533 123 9 47 chr2 155217147 155217911 -98038672 + L1PA16 LINE L1 5423 6157 -9 227 279 73 0 chr2 155217941 155218009 -98038574 - MIR SINE MIR -164 98 26 2937 241 16 2 chr2 155218279 155218909 -98037674 + MER82 DNA MER2_type 14 652 -1 206 266 106 43 chr2 155219958 155220052 -98036531 + L2 LINE L2 3214 3313 0 330 204 9 124 chr2 155220209 155220322 -98036261 - L2 LINE L2 0 3313 3214 24 32 0 0 chr2 155221607 155221638 -98034945 + AT_rich Low_complexity Low_complexity 1 31 0 2522 151 23 16 chr2 155221657 155222088 -98034495 + Tigger2a DNA MER2_type 1 434 0 234 279 169 32 chr2 155222494 155222648 -98033935 + L3b LINE CR1 1288 1462 -121 365 254 47 107 chr2 155226150 155226449 -98030134 + L1ME4a LINE L1 5745 6025 -96 1781 183 119 67 chr2 155226464 155226533 -98030050 - MLT1D LTR MaLR 0 505 441 2209 132 14 14 chr2 155226533 155226904 -98029679 + L1PA16 LINE L1 5795 6165 -1 1781 183 119 67 chr2 155226904 155227314 -98029269 - MLT1D LTR MaLR -64 441 1 1999 132 14 0 chr2 155227419 155227700 -98028883 + AluSx SINE Alu 3 287 -25 275 375 88 7 chr2 155228023 155228159 -98028424 - L2 LINE L2 -1 3271 3125 226 279 19 10 chr2 155228614 155228718 -98027865 - L2 LINE L2 -621 2693 2589 602 301 47 56 chr2 155228729 155229051 -98027532 + L2 LINE L2 2995 3313 0 268 312 210 22 chr2 155229940 155230078 -98026505 + MIR SINE MIR 79 242 -20 2033 198 8 52 chr2 155230893 155231372 -98025211 + LTR22A LTR ERVK 1 458 0 253 341 23 0 chr2 155231673 155231761 -98024822 - MIR SINE MIR -149 113 24 332 320 41 29 chr2 155232194 155232366 -98024217 - MLT1J2 LTR MaLR -14 436 263 1016 180 115 25 chr2 155232801 155233001 -98023582 - MER58A DNA MER1_type -6 218 1 288 0 0 0 chr2 155233050 155233082 -98023501 + (TGG)n Simple_repeat Simple_repeat 1 32 0 2685 136 2 5 chr2 155234178 155234606 -98021977 - L1P LINE L1 -2439 3707 3281 601 270 7 7 chr2 155234614 155234762 -98021821 - L1P3 LINE L1 -6313 148 1 943 195 0 0 chr2 155234766 155234925 -98021658 - FAM SINE Alu -1 48 1 252 253 46 0 chr2 155235132 155235228 -98021355 + LTR67 LTR ERVL 32 197 -360 2131 70 7 64 chr2 155235762 155236060 -98020523 - AluY SINE Alu -25 286 6 280 319 181 21 chr2 155236423 155236567 -98020016 - MIR3 SINE MIR -25 183 17 433 282 218 9 chr2 155237785 155238001 -98018582 - MIR SINE MIR 0 262 2 42440 50 6 1 chr2 155238636 155244747 -98011836 + L1PA4 LINE L1 14 6155 0 370 278 139 26 chr2 155245133 155245327 -98011256 + MIR SINE MIR 20 235 -27 233 307 109 20 chr2 155245365 155245466 -98011117 - L2 LINE L2 -37 3235 3126 358 286 44 0 chr2 155245745 155245836 -98010747 + MER5A DNA MER1_type 10 104 -85 6757 54 3 1 chr2 155245884 155246733 -98009850 + L1PA7 LINE L1 5301 6151 -3 270 238 143 0 chr2 155246846 155246930 -98009653 + MIR SINE MIR 113 208 -54 197 373 50 50 chr2 155247679 155248001 -98008582 - L2 LINE L2 -443 2871 2550 2032 125 4 4 chr2 155248477 155248783 -98007800 - AluSx SINE Alu 0 306 1 432 231 58 10 chr2 155249057 155249161 -98007422 - MER5B DNA MER1_type 0 178 70 338 118 0 0 chr2 155249178 155249229 -98007354 + MADE1 DNA Mariner 1 51 -29 531 205 128 13 chr2 155249242 155249398 -98007185 - MER5B DNA MER1_type -4 174 1 2144 132 0 0 chr2 155249485 155249796 -98006787 - AluY SINE Alu 0 311 1 2129 128 30 41 chr2 155250122 155250490 -98006093 - THE1B LTR MaLR 0 364 1 6904 132 45 11 chr2 155250870 155251412 -98005171 + Tigger3b DNA MER2_type 2 524 -2504 249 33 0 0 chr2 155251412 155251442 -98005141 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 6904 132 45 11 chr2 155251442 155252088 -98004495 + Tigger3b DNA MER2_type 524 1231 0 351 65 0 0 chr2 155252339 155252385 -98004198 + (CA)n Simple_repeat Simple_repeat 1 46 0 1393 149 88 3 chr2 155253750 155254045 -98002538 + MER33 DNA MER1_type 1 320 -4 22 56 0 0 chr2 155254182 155254218 -98002365 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr2 155254786 155254808 -98001775 + AT_rich Low_complexity Low_complexity 1 22 0 448 119 0 0 chr2 155255569 155255636 -98000947 - Alu SINE Alu -11 301 235 331 177 16 0 chr2 155255636 155255698 -98000885 - AluJb SINE Alu -170 132 70 833 284 51 30 chr2 155255832 155256306 -98000277 - L1MC4a LINE L1 -301 5820 5410 573 371 11 25 chr2 155257137 155257420 -97999163 - L3 LINE CR1 -3 1574 1296 312 279 106 45 chr2 155258702 155258881 -97997702 + MIR SINE MIR 15 204 -58 997 306 70 38 chr2 155259307 155259777 -97996806 - LTR16C LTR ERVL -6 485 1 1009 193 15 0 chr2 155260208 155260410 -97996173 + L1 LINE L1 3817 4021 -2125 559 232 0 0 chr2 155262260 155262372 -97994211 + MER63 DNA MER1_type 1 738 -98 366 406 31 6 chr2 155262491 155262651 -97993932 + MIR3 SINE MIR 6 169 -39 224 280 72 72 chr2 155262699 155262824 -97993759 + L2 LINE L2 3146 3270 -2 210 71 0 0 chr2 155263515 155263543 -97993040 + (A)n Simple_repeat Simple_repeat 1 28 0 544 170 7 21 chr2 155264136 155264277 -97992306 + (CA)n Simple_repeat Simple_repeat 1 139 0 235 319 8 84 chr2 155266409 155266528 -97990055 - L2 LINE L2 -1 3312 3203 248 324 36 27 chr2 155266609 155266720 -97989863 + MIR SINE MIR 15 126 -136 2362 93 0 3 chr2 155266832 155267133 -97989450 + AluSq SINE Alu 1 300 -13 378 0 0 0 chr2 155268457 155268499 -97988084 + (CA)n Simple_repeat Simple_repeat 1 42 0 357 82 0 0 chr2 155268938 155268987 -97987596 + (CA)n Simple_repeat Simple_repeat 2 50 0 345 275 0 0 chr2 155269169 155269249 -97987334 + L2 LINE L2 3193 3272 0 331 247 120 44 chr2 155271313 155271471 -97985112 + LTR33A LTR ERVL 23 192 -331 431 237 25 25 chr2 155271541 155271659 -97984924 + LTR33A LTR ERVL 406 523 0 612 168 9 9 chr2 155271853 155271960 -97984623 + U6 snRNA snRNA 1 107 0 281 305 90 12 chr2 155272695 155272862 -97983721 - HAL1b LINE L1 -41 1307 1128 1464 290 95 27 chr2 155273163 155273857 -97982726 + HAL1 LINE L1 365 1105 -1402 1052 170 25 0 chr2 155273861 155274061 -97982522 + L1M4 LINE L1 4873 5077 -1069 2043 148 11 11 chr2 155274066 155274439 -97982144 - L1MA4 LINE L1 -1 6299 5927 2047 150 21 34 chr2 155274439 155274819 -97981764 + MSTA-int LTR MaLR 1272 1646 -5 2479 141 53 15 chr2 155274848 155274875 -97981708 + MSTA LTR MaLR 2 26 -402 2473 119 6 0 chr2 155274875 155275228 -97981355 - THE1A LTR MaLR 0 355 1 2479 141 53 15 chr2 155275228 155275611 -97980972 + MSTA LTR MaLR 26 428 0 5143 153 38 19 chr2 155275613 155276585 -97979998 + L1MA7 LINE L1 5296 6286 -5 27 49 0 0 chr2 155276585 155276626 -97979957 + AT_rich Low_complexity Low_complexity 1 41 0 442 168 159 0 chr2 155276627 155276734 -97979849 + L1MB7 LINE L1 6061 6184 0 727 265 31 56 chr2 155276734 155277021 -97979562 - L2 LINE L2 -1123 2191 1912 361 176 71 0 chr2 155277126 155277211 -97979372 + MER69 DNA AcHobo 2345 2435 -91 2934 225 65 73 chr2 155277219 155277578 -97979005 + HAL1 LINE L1 1090 1450 -1057 784 160 0 8 chr2 155277578 155277703 -97978880 + FLAM_C SINE Alu 1 124 -9 2934 225 65 73 chr2 155277703 155278560 -97978023 + HAL1 LINE L1 1450 2296 -211 1164 289 67 20 chr2 155280646 155281138 -97975445 + L1MEc LINE L1 210 724 -5839 186 43 0 0 chr2 155281139 155281162 -97975421 + (CAA)n Simple_repeat Simple_repeat 2 24 0 229 287 123 64 chr2 155281227 155281478 -97975105 + L1MEc LINE L1 1418 1683 -4701 7351 71 9 2 chr2 155331490 155332510 -97924073 + L1PA8 LINE L1 5146 6171 -1 2057 271 139 26 chr2 155332736 155333151 -97923432 - L2 LINE L2 -558 2756 2389 2015 132 3 20 chr2 155333151 155333455 -97923128 - AluSx SINE Alu -13 299 1 2057 271 139 26 chr2 155333455 155333990 -97922593 - L2 LINE L2 -925 2389 1699 3782 200 0 0 chr2 155334252 155334972 -97921611 - L1 LINE L1 -1862 4284 3565 185 289 0 0 chr2 155335793 155335838 -97920745 - MIR SINE MIR 0 262 218 245 128 0 0 chr2 155335982 155336021 -97920562 - MIR SINE MIR -61 201 163 194 350 41 94 chr2 155336048 155336388 -97920195 - L2 LINE L2 -37 3235 2914 517 230 59 0 chr2 155336500 155336635 -97919948 - MER112 DNA MER1_type -116 144 2 675 264 55 0 chr2 155336916 155337079 -97919504 + MER69A DNA AcHobo 4 175 -2 1764 100 74 22 chr2 155337155 155337425 -97919158 + AluSg SINE Alu 1 284 -26 235 319 25 25 chr2 155337473 155337630 -97918953 + L2 LINE L2 1303 1459 -1855 396 303 143 28 chr2 155338684 155339077 -97917506 + L2 LINE L2 1469 1906 -1408 1408 194 30 101 chr2 155339078 155339476 -97917107 - MLT1B LTR MaLR 0 390 21 467 293 122 120 chr2 155339516 155340035 -97916548 + L2 LINE L2 1903 2425 -889 2071 117 0 7 chr2 155340035 155340318 -97916265 - AluSq SINE Alu -32 281 1 467 293 122 120 chr2 155340318 155340604 -97915979 + L2 LINE L2 2425 2709 -605 2362 231 58 11 chr2 155340955 155341527 -97915056 + L1MC4 LINE L1 6450 7048 -994 1584 210 81 56 chr2 155341495 155341946 -97914637 + L1MC4 LINE L1 7289 7756 -286 * 1573 133 105 0 chr2 155341946 155342194 -97914389 + AluSx SINE Alu 23 296 -16 1584 210 81 56 chr2 155342194 155342261 -97914322 + L1MC4 LINE L1 7756 7820 -222 1565 254 41 78 chr2 155342288 155342843 -97913740 + MLT1E LTR MaLR 3 537 -56 358 135 0 0 chr2 155343005 155343057 -97913526 + MLT1E LTR MaLR 516 567 0 298 93 23 0 chr2 155343057 155343100 -97913483 + L1MC4 LINE L1 7857 7900 -142 536 322 112 40 chr2 155343157 155343681 -97912902 + L2 LINE L2 2706 3268 -4 216 175 0 0 chr2 155344184 155344224 -97912359 + (CAGAGA)n Simple_repeat Simple_repeat 2 41 0 45214 35 1 5 chr2 155345062 155351263 -97905320 + L1PA4 LINE L1 1 6176 0 346 254 212 0 chr2 155351632 155351750 -97904833 - L2 LINE L2 0 3313 3171 28724 128 19 67 chr2 155351801 155357124 -97899459 + L1P LINE L1 12 5081 -1065 345 282 0 0 chr2 155357266 155357344 -97899239 + MER58B DNA MER1_type 264 341 0 676 317 63 3 chr2 155357344 155357663 -97898920 - L2 LINE L2 -1687 1627 1290 232 250 14 14 chr2 155357998 155358070 -97898513 + L1ME LINE L1 5727 5798 -364 22 56 0 0 chr2 155358432 155358468 -97898115 + AT_rich Low_complexity Low_complexity 1 36 0 1018 152 0 45 chr2 155358533 155358577 -97898006 + AluJb SINE Alu 84 128 -184 189 0 0 0 chr2 155358577 155358598 -97897985 + (CA)n Simple_repeat Simple_repeat 2 22 0 1018 152 0 45 chr2 155358598 155358787 -97897796 + AluJb SINE Alu 128 286 -26 509 317 37 81 chr2 155358911 155359233 -97897350 + L2 LINE L2 2957 3264 -8 746 247 30 66 chr2 155360063 155360367 -97896216 + MLT1I LTR MaLR 98 390 -19 375 267 0 41 chr2 155361167 155361290 -97895293 + MIR3 SINE MIR 59 177 -31 589 261 110 71 chr2 155362162 155362699 -97893884 + L1ME4a LINE L1 5468 6025 -96 380 259 65 18 chr2 155362795 155362965 -97893618 + L1ME4a LINE L1 5721 5898 -223 594 252 32 101 chr2 155363511 155363789 -97892794 - MER112 DNA MER1_type -1 259 1 191 311 78 29 chr2 155363910 155364013 -97892570 + MIR SINE MIR 112 219 -43 212 319 56 4 chr2 155365649 155365810 -97890773 - MIR SINE MIR -7 255 25 1002 133 12 0 chr2 155365954 155366119 -97890464 - L1MA7 LINE L1 0 6291 6125 255 161 40 129 chr2 155367062 155367186 -97889397 - LTR67 LTR ERVL -9 548 436 718 201 153 51 chr2 155367330 155367604 -97888979 + L1MC4 LINE L1 7738 8039 -3 422 311 7 22 chr2 155367621 155367756 -97888827 + MER5B DNA MER1_type 43 175 -3 353 316 99 29 chr2 155368083 155368176 -97888407 - L1MC/D LINE L1 -1986 5822 5737 216 0 0 0 chr2 155368176 155368200 -97888383 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 353 316 99 29 chr2 155368200 155368378 -97888205 - L1MC/D LINE L1 -2071 5737 5532 187 313 52 21 chr2 155368459 155368555 -97888028 + MIR SINE MIR 28 126 -136 263 268 0 0 chr2 155368567 155368623 -97887960 - L2 LINE L2 -14 3258 3203 1500 262 28 14 chr2 155368628 155369056 -97887527 - LTR16A LTR ERVL 0 450 17 1463 314 74 57 chr2 155369071 155369427 -97887156 - L2 LINE L2 -71 3201 2852 2164 116 36 0 chr2 155369427 155369729 -97886854 + AluSp SINE Alu 1 313 0 1463 314 74 57 chr2 155369729 155370835 -97885748 - L2 LINE L2 -420 2852 1700 1914 163 3 3 chr2 155371013 155371319 -97885264 + AluJo SINE Alu 1 306 -6 207 0 0 0 chr2 155371336 155371359 -97885224 + (CA)n Simple_repeat Simple_repeat 1 23 0 271 186 81 105 chr2 155371578 155371664 -97884919 - MER5B DNA MER1_type -75 103 20 2496 87 0 0 chr2 155372084 155372396 -97884187 - AluSx SINE Alu 0 312 1 240 290 60 30 chr2 155373642 155373742 -97882841 + MIR3 SINE MIR 95 197 -11 21 0 0 0 chr2 155374286 155374307 -97882276 + AT_rich Low_complexity Low_complexity 1 21 0 1718 131 0 8 chr2 155374706 155374970 -97881613 + AluSc SINE Alu 37 298 0 1802 143 0 45 chr2 155375233 155375547 -97881036 + AluJo SINE Alu 5 304 -8 447 304 37 0 chr2 155376952 155377087 -97879496 + MIR SINE MIR 112 251 -11 216 267 0 0 chr2 155379323 155379368 -97877215 + MIR SINE MIR 105 149 -113 391 246 236 0 chr2 155379676 155379786 -97876797 + MER5A DNA MER1_type 25 160 -29 352 333 51 0 chr2 155379878 155380016 -97876567 + MIR SINE MIR 8 152 -110 25 0 0 0 chr2 155380101 155380126 -97876457 + AT_rich Low_complexity Low_complexity 1 25 0 504 0 0 0 chr2 155381548 155381604 -97874979 + (TG)n Simple_repeat Simple_repeat 2 57 0 352 241 62 48 chr2 155383446 155383591 -97872992 + MER103 DNA DNA 2 148 -18 247 338 63 76 chr2 155384671 155384908 -97871675 + L2 LINE L2 2242 2475 -839 6617 206 46 24 chr2 155385617 155388135 -97868448 - L1MD1 LINE L1 0 6636 4053 180 0 0 0 chr2 155388135 155388155 -97868428 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 6617 206 46 24 chr2 155388155 155388492 -97868091 - L1MD1 LINE L1 -2583 4053 3725 281 115 66 0 chr2 155388521 155388582 -97868001 - L1MA7 LINE L1 -6 6285 6221 * 6336 199 86 49 chr2 155388579 155389819 -97866764 - L1MD1 LINE L1 -2987 3553 2361 2250 121 0 0 chr2 155389819 155390117 -97866466 - AluSx SINE Alu -14 298 1 6336 199 86 49 chr2 155390117 155392041 -97864542 - L1MD1 LINE L1 -4179 2361 10 771 208 52 42 chr2 155392042 155392234 -97864349 - MER20 DNA MER1_type -25 194 1 182 279 0 88 chr2 155392271 155392339 -97864244 + L2 LINE L2 3188 3249 -23 1260 238 122 26 chr2 155392563 155392918 -97863665 + L1ME3A LINE L1 5572 6016 -154 1831 153 87 60 chr2 155392918 155393298 -97863285 - MLT1B LTR MaLR 0 390 1 1260 238 122 26 chr2 155393298 155393454 -97863129 + L1ME3A LINE L1 6016 6156 -14 2449 90 0 0 chr2 155394179 155394479 -97862104 + AluY SINE Alu 1 300 -11 341 265 0 0 chr2 155394899 155394982 -97861601 - L1MEc LINE L1 -4788 1608 1526 * 1439 252 152 15 chr2 155394979 155395570 -97861013 + L1ME3 LINE L1 5483 6154 -8 354 262 71 16 chr2 155395623 155395749 -97860834 + L1MEd LINE L1 19 151 -5968 358 306 36 82 chr2 155395819 155396100 -97860483 + L1MEd LINE L1 280 547 -5572 252 254 0 30 chr2 155396506 155396573 -97860010 - L3 LINE CR1 -373 1204 1140 22 0 0 0 chr2 155397319 155397341 -97859242 + AT_rich Low_complexity Low_complexity 1 22 0 209 139 23 0 chr2 155397941 155397984 -97858599 - L3 LINE CR1 -732 845 802 1462 174 43 112 chr2 155398317 155398709 -97857874 + MLT1A1 LTR MaLR 1 365 0 694 249 67 6 chr2 155398852 155399017 -97857566 + MER5B DNA MER1_type 4 178 0 312 333 40 0 chr2 155399290 155399389 -97857194 - MER5B DNA MER1_type -2 176 74 689 187 19 65 chr2 155399404 155399559 -97857024 + MER5A DNA MER1_type 42 189 0 3167 179 79 48 chr2 155400784 155401417 -97855166 + L1MD2 LINE L1 5572 6229 -130 2234 120 16 0 chr2 155401417 155401725 -97854858 - AluSq SINE Alu 0 313 1 3167 179 79 48 chr2 155401725 155401778 -97854805 + L1MD2 LINE L1 6229 6279 -80 577 221 77 0 chr2 155401778 155401882 -97854701 - FLAM_C SINE Alu -30 113 2 249 175 32 0 chr2 155401886 155401949 -97854634 + L1MD1 LINE L1 6177 6241 -1 314 176 27 27 chr2 155402020 155402094 -97854489 + MER116 DNA Mariner 1 74 -6 15260 138 27 20 chr2 155403295 155405514 -97851069 + Tigger1 DNA MER2_type 1 2240 -178 1865 147 3 0 chr2 155405514 155405806 -97850777 + AluJb SINE Alu 11 303 -9 15260 138 27 20 chr2 155405806 155405987 -97850596 + Tigger1 DNA MER2_type 2240 2418 0 23 33 0 0 chr2 155406061 155406091 -97850492 + AT_rich Low_complexity Low_complexity 1 30 0 2515 55 3 19 chr2 155408732 155409043 -97847540 + AluY SINE Alu 1 306 -5 276 279 13 0 chr2 155410761 155410840 -97845743 - MIR SINE MIR -8 254 175 366 364 38 8 chr2 155411000 155411132 -97845451 + L2 LINE L2 3128 3263 -9 324 281 26 59 chr2 155411293 155411471 -97845112 + MER5A DNA MER1_type 3 163 -15 482 222 314 0 chr2 155412620 155412814 -97843769 - MIR SINE MIR -5 257 3 2067 116 7 10 chr2 155412860 155413152 -97843431 + AluSq SINE Alu 5 295 -18 25 31 0 0 chr2 155413758 155413790 -97842793 + AT_rich Low_complexity Low_complexity 1 32 0 278 236 28 94 chr2 155414025 155414131 -97842452 - L2 LINE L2 -40 3232 3134 1797 154 106 6 chr2 155414440 155414790 -97841793 - MLT1B LTR MaLR 0 390 6 939 98 0 0 chr2 155415647 155415769 -97840814 + L1PA7 LINE L1 6033 6154 0 2554 169 55 18 chr2 155417340 155418005 -97838578 - L1M4 LINE L1 -385 5799 5114 2109 117 0 0 chr2 155419337 155419640 -97836943 + AluSx SINE Alu 1 303 0 947 269 67 35 chr2 155419645 155420148 -97836435 + MLT1G LTR MaLR 22 555 0 304 222 186 104 chr2 155420223 155420444 -97836139 - MLT1K LTR MaLR -19 569 331 319 339 27 49 chr2 155420506 155420730 -97835853 - MLT1K LTR MaLR -368 220 2 292 138 52 17 chr2 155421401 155421459 -97835124 + MLT1K LTR MaLR 509 568 -20 1003 154 0 0 chr2 155421891 155422034 -97834549 - Tigger3(Golem) DNA MER2_type 0 3038 2896 397 224 0 0 chr2 155422032 155422099 -97834484 - Tigger3(Golem) DNA MER2_type -2952 77 11 * 273 436 57 8 chr2 155422942 155423206 -97833377 + L2 LINE L2 235 511 -2803 410 269 131 8 chr2 155425214 155425344 -97831239 + MIR SINE MIR 26 171 -91 583 176 120 16 chr2 155425822 155425947 -97830636 - MER103 DNA DNA -21 145 8 2271 160 16 32 chr2 155426784 155427215 -97829368 + L1MA8 LINE L1 5811 6234 -57 595 239 173 5 chr2 155427370 155427567 -97829016 + MIR SINE MIR 2 231 -31 22 35 0 0 chr2 155428039 155428068 -97828515 + AT_rich Low_complexity Low_complexity 1 29 0 422 252 102 41 chr2 155428093 155428122 -97828461 - MIR SINE MIR -3 259 233 393 203 0 13 chr2 155428122 155428201 -97828382 + MER116 DNA Mariner 2 79 -1 422 252 102 41 chr2 155428201 155428318 -97828265 - MIR SINE MIR -29 233 104 2096 101 25 4 chr2 155428325 155428601 -97827982 - AluSx SINE Alu -8 304 23 580 258 57 0 chr2 155428662 155428821 -97827762 - MER5B DNA MER1_type -4 174 7 232 274 88 44 chr2 155429401 155429514 -97827069 + MIR SINE MIR 20 137 -125 219 36 0 0 chr2 155429879 155429907 -97826676 + (CA)n Simple_repeat Simple_repeat 2 29 0 882 129 170 0 chr2 155430141 155430312 -97826271 + MER3 DNA MER1_type 5 204 -5 398 293 138 22 chr2 155430616 155430797 -97825786 - MIR SINE MIR -27 235 34 238 276 39 24 chr2 155431280 155431407 -97825176 - L1ME LINE L1 -356 5765 5637 379 244 33 0 chr2 155431815 155431905 -97824678 - L2 LINE L2 0 3313 3221 560 316 24 16 chr2 155432440 155432690 -97823893 + MERVL LTR ERVL 3189 3440 -2045 * 782 340 51 49 chr2 155432686 155433695 -97822888 + MERVL LTR ERVL 4438 4988 -8 302 216 37 168 chr2 155433699 155433755 -97822828 + LTR16B LTR ERVL 204 266 -198 1818 148 0 48 chr2 155433755 155434066 -97822517 + AluJb SINE Alu 1 296 -16 302 216 37 168 chr2 155434066 155434199 -97822384 + LTR16B LTR ERVL 266 368 -96 461 303 67 6 chr2 155434618 155434796 -97821787 - Charlie8 DNA MER1_type -2146 271 83 284 373 42 14 chr2 155435057 155435199 -97821384 - L2 LINE L2 -6 3266 3121 449 300 117 23 chr2 155437370 155437677 -97818906 + L1MC/D LINE L1 5351 5686 -2122 785 143 130 19 chr2 155438511 155438672 -97817911 - MER5A DNA MER1_type 0 189 11 296 259 0 0 chr2 155439597 155439655 -97816928 - L2 LINE L2 -10 3262 3205 1098 174 5 0 chr2 155439664 155439859 -97816724 + L1PBa LINE L1 3 198 -6665 6848 116 36 2 chr2 155439864 155441449 -97815134 + L1PBa LINE L1 634 2424 -4439 25780 31 1 1 chr2 155441452 155447004 -97809579 + L1PA3 LINE L1 606 6152 -3 3532 98 35 7 chr2 155446979 155447477 -97809106 + L1PB1 LINE L1 5276 5796 -355 * 288 53 0 0 chr2 155447477 155447515 -97809068 + (CA)n Simple_repeat Simple_repeat 2 39 0 3532 98 35 7 chr2 155447515 155447592 -97808991 + L1PB1 LINE L1 5796 5869 -282 1036 44 52 0 chr2 155447592 155447727 -97808856 - L1PA8 LINE L1 -1 6171 6030 2144 79 3 7 chr2 155447730 155448021 -97808562 + L1PB1 LINE L1 5860 6149 -2 23 33 0 0 chr2 155448021 155448051 -97808532 + AT_rich Low_complexity Low_complexity 1 30 0 285 344 33 16 chr2 155448209 155448331 -97808252 - L2 LINE L2 -185 3087 2964 298 241 128 35 chr2 155448365 155448506 -97808077 + MLT1J LTR MaLR 25 178 -333 245 306 14 0 chr2 155448593 155448665 -97807918 + MLT1L LTR MaLR 200 272 -343 181 154 55 11 chr2 155449974 155450065 -97806518 + (TTTA)n Simple_repeat Simple_repeat 2 96 0 22 0 0 0 chr2 155450078 155450100 -97806483 + AT_rich Low_complexity Low_complexity 1 22 0 1293 211 57 6 chr2 155450164 155450515 -97806068 - Charlie4a DNA MER1_type -3 505 137 372 43 0 0 chr2 155451277 155451323 -97805260 + (CA)n Simple_repeat Simple_repeat 1 46 0 287 240 0 0 chr2 155451899 155451974 -97804609 + HAL1 LINE L1 1433 1507 -1000 277 319 65 0 chr2 155452257 155452395 -97804188 + MLT1J LTR MaLR 154 300 -249 361 230 157 28 chr2 155452419 155452597 -97803986 + MLT1F1 LTR MaLR 344 544 -23 1081 143 24 29 chr2 155452677 155452886 -97803697 - MER2 DNA MER2_type -134 211 4 555 273 0 0 chr2 155452907 155453039 -97803544 - MIR SINE MIR -58 204 73 493 308 40 14 chr2 155453495 155453963 -97802620 + L1M4 LINE L1 3510 3992 -2154 386 287 175 42 chr2 155454311 155454694 -97801889 + L1M4 LINE L1 4579 5012 -1134 28 61 0 0 chr2 155455189 155455238 -97801345 + AT_rich Low_complexity Low_complexity 1 49 0 2059 117 3 10 chr2 155456702 155456993 -97799590 - AluSg SINE Alu -21 289 1 1612 197 18 37 chr2 155457434 155457815 -97798768 + MLT1A2 LTR MaLR 1 374 0 190 271 163 47 chr2 155458750 155458879 -97797704 + MIR SINE MIR 119 262 0 189 171 0 0 chr2 155461542 155461577 -97795006 + GA-rich Low_complexity Low_complexity 3 37 0 233 351 106 24 chr2 155462056 155462264 -97794319 + L2 LINE L2 3043 3267 -5 272 290 0 0 chr2 155463881 155463950 -97792633 + CT-rich Low_complexity Low_complexity 2 70 0 246 296 0 0 chr2 155464580 155464653 -97791930 + GA-rich Low_complexity Low_complexity 2 125 0 2531 43 0 0 chr2 155464702 155465005 -97791578 + L1PA3 LINE L1 5850 6152 -3 25 0 0 0 chr2 155465005 155465030 -97791553 + AT_rich Low_complexity Low_complexity 1 25 0 280 306 135 9 chr2 155465618 155465729 -97790854 - L2 LINE L2 -10 3262 3138 636 122 99 0 chr2 155466565 155466696 -97789887 + L1MB4 LINE L1 6036 6179 -1 206 269 103 13 chr2 155467877 155467955 -97788628 + MIR SINE MIR 32 116 -92 4134 259 107 29 chr2 155468083 155469985 -97786598 + L2 LINE L2 1282 3312 -1 1893 164 0 3 chr2 155471319 155471606 -97784977 + AluJb SINE Alu 1 286 -26 222 292 123 0 chr2 155471743 155471808 -97784775 + L2 LINE L2 3171 3243 -29 2055 125 4 0 chr2 155471957 155472238 -97784345 - AluSx SINE Alu -30 282 1 183 156 0 0 chr2 155472519 155472551 -97784032 + A-rich Low_complexity Low_complexity 1 32 0 372 156 52 13 chr2 155473147 155473224 -97783359 - MIR SINE MIR -64 198 119 188 245 19 19 chr2 155475197 155475250 -97781333 - L2 LINE L2 -5 3308 3256 1354 286 181 12 chr2 155476011 155476778 -97779805 + L2 LINE L2 1851 2747 -567 511 262 103 9 chr2 155476865 155477078 -97779505 - L1ME1 LINE L1 -36 6130 5907 460 211 0 11 chr2 155478562 155478652 -97777931 + AluJb SINE Alu 192 280 -32 1253 144 10 34 chr2 155478767 155478975 -97777608 - AluJo SINE Alu -25 287 85 1558 179 37 64 chr2 155479037 155479412 -97777171 - MLT1A1 LTR MaLR 0 365 1 220 354 143 16 chr2 155480693 155481063 -97775520 + L2 LINE L2 2262 2678 -636 1048 142 25 0 chr2 155481185 155481347 -97775236 - FRAM SINE Alu -11 165 1 378 300 54 124 chr2 155481351 155481761 -97774822 + L2 LINE L2 2836 3216 -56 1235 200 185 20 chr2 155482193 155482652 -97773931 + MLT1E LTR MaLR 12 593 0 579 164 69 0 chr2 155483868 155483984 -97772599 + MER106B DNA MER1_type 28 151 -908 467 78 0 0 chr2 155483983 155484047 -97772536 + U2 snRNA snRNA 2 65 -123 * 21 0 0 0 chr2 155484067 155484088 -97772495 + AT_rich Low_complexity Low_complexity 1 21 0 216 363 67 34 chr2 155484311 155484490 -97772093 + MIR SINE MIR 28 212 -50 381 236 0 0 chr2 155484894 155484989 -97771594 + L1ME LINE L1 5497 5591 -530 254 317 67 56 chr2 155485987 155486167 -97770416 - MIR SINE MIR -33 229 48 721 279 88 9 chr2 155486267 155486482 -97770101 + MIR SINE MIR 25 256 -6 1194 222 78 122 chr2 155486576 155486838 -97769745 + MER39 LTR ERV1 1 273 -434 1681 204 60 24 chr2 155486838 155487220 -97769363 + MSTD LTR MaLR 1 396 0 1194 222 78 122 chr2 155487220 155487524 -97769059 + MER39 LTR ERV1 273 707 0 2092 167 86 47 chr2 155487525 155488011 -97768572 - MLT1D LTR MaLR 0 505 1 3017 143 38 0 chr2 155488239 155488765 -97767818 + MER34C LTR ERV1 39 584 -1 187 388 112 40 chr2 155488843 155489306 -97767277 - L2 LINE L2 -411 2903 2396 4172 134 2 2 chr2 155489306 155489941 -97766642 + MER41B LTR ERV1 1 635 0 187 388 112 40 chr2 155489941 155490005 -97766578 - L2 LINE L2 -918 2396 2338 369 279 62 62 chr2 155490072 155490233 -97766350 + MIR3 SINE MIR 20 180 -28 203 211 0 0 chr2 155490384 155490422 -97766161 - MIR SINE MIR -7 255 218 183 250 0 62 chr2 155490872 155490936 -97765647 - MER5B DNA MER1_type -30 148 89 28 29 0 0 chr2 155491048 155491083 -97765500 + AT_rich Low_complexity Low_complexity 1 35 0 2333 112 0 6 chr2 155491651 155491965 -97764618 + AluSx SINE Alu 1 312 0 26 50 0 0 chr2 155494666 155494706 -97761877 + AT_rich Low_complexity Low_complexity 1 40 0 2187 123 0 0 chr2 155495231 155495524 -97761059 + AluSg SINE Alu 1 293 -17 204 322 35 35 chr2 155496809 155496896 -97759687 + L2 LINE L2 3004 3090 -182 1019 223 0 5 chr2 155496950 155497147 -97759436 - MER58A DNA MER1_type -1 223 28 304 273 213 0 chr2 155497164 155497314 -97759269 - L3 LINE CR1 -68 1509 1328 454 191 0 0 chr2 155497427 155497511 -97759072 - L3 LINE CR1 -253 1324 1241 23 0 0 0 chr2 155498119 155498142 -97758441 + AT_rich Low_complexity Low_complexity 1 23 0 2211 132 3 0 chr2 155498313 155498624 -97757959 - AluSx SINE Alu 0 312 1 766 202 40 61 chr2 155498972 155499170 -97757413 - MER3 DNA MER1_type -14 195 2 1891 258 105 33 chr2 155500480 155501520 -97755063 + L2 LINE L2 2170 3257 -56 198 306 65 0 chr2 155501520 155501582 -97755001 + L2 LINE L2 3221 3286 -27 1060 90 0 0 chr2 155501670 155501803 -97754780 - AluSq/x SINE Alu -180 133 1 713 221 58 97 chr2 155502371 155502728 -97753855 + MLT1A1 LTR MaLR 11 328 -68 2398 70 0 3 chr2 155502738 155503036 -97753547 + AluSc SINE Alu 1 297 -12 21 57 0 0 chr2 155503528 155503563 -97753020 + AT_rich Low_complexity Low_complexity 1 35 0 2213 97 0 29 chr2 155504122 155504430 -97752153 + AluY SINE Alu 1 299 -12 989 207 12 0 chr2 155504663 155504832 -97751751 - FAM SINE Alu -2 173 3 291 229 17 59 chr2 155505695 155505813 -97750770 - MER103 DNA DNA 0 166 54 226 318 15 15 chr2 155505919 155505985 -97750598 - MIR SINE MIR -76 132 67 749 158 53 8 chr2 155507417 155507550 -97749033 + MSTB LTR MaLR 1 139 -287 1283 200 89 51 chr2 155507799 155508149 -97748434 + MLT1A1 LTR MaLR 1 363 -2 195 353 17 43 chr2 155508380 155508496 -97748087 - L2 LINE L2 -214 3058 2946 303 276 20 10 chr2 155509059 155509157 -97747426 - MIR3 SINE MIR -48 160 62 296 269 19 10 chr2 155509168 155509277 -97747306 - MIR SINE MIR -102 106 2 22 0 0 0 chr2 155509546 155509568 -97747015 + AT_rich Low_complexity Low_complexity 1 22 0 1952 201 61 0 chr2 155510988 155511332 -97745251 - MLT1A1 LTR MaLR 0 365 1 4754 103 13 38 chr2 155511407 155512097 -97744486 + L1PA15 LINE L1 5480 6152 -13 282 277 15 85 chr2 155512495 155512625 -97743958 - L2 LINE L2 -2 3270 3150 288 0 0 0 chr2 155512776 155512808 -97743775 + (CA)n Simple_repeat Simple_repeat 2 33 0 516 198 87 16 chr2 155512988 155513114 -97743469 - L1ME4a LINE L1 -12 6109 5975 7420 128 47 18 chr2 155513725 155514920 -97741663 - Tigger3b DNA MER2_type -1 1230 1 368 248 147 0 chr2 155516040 155516149 -97740434 + L2 LINE L2 3189 3313 0 381 328 49 0 chr2 155516152 155516274 -97740309 - MIR SINE MIR -86 176 49 274 244 73 2 chr2 155517124 155517210 -97739373 + MIR SINE MIR 76 166 -42 25 31 0 0 chr2 155519218 155519250 -97737333 + GC_rich Low_complexity Low_complexity 1 32 0 408 215 74 21 chr2 155520849 155520979 -97735604 + L1ME4a LINE L1 1206 6077 -2 500 95 27 0 chr2 155521641 155521715 -97734868 - Alu SINE Alu -2 307 232 22 0 0 0 chr2 155521770 155521792 -97734791 + AT_rich Low_complexity Low_complexity 1 22 0 1841 126 78 14 chr2 155521942 155522235 -97734348 - AluSx SINE Alu 0 312 1 685 93 52 0 chr2 155522290 155522387 -97734196 - L1PB3 LINE L1 -2 6152 6051 296 254 16 0 chr2 155522577 155522640 -97733943 + L2 LINE L2 3206 3269 -3 22 56 0 0 chr2 155522895 155522931 -97733652 + AT_rich Low_complexity Low_complexity 1 36 0 1652 213 31 16 chr2 155522951 155523477 -97733106 + L1ME LINE L1 5104 5637 -529 8776 140 39 13 chr2 155523481 155524885 -97731698 + Tigger1 DNA MER2_type 1 1440 -978 2721 54 42 3 chr2 155524885 155525216 -97731367 - LTR14A LTR ERVK 0 344 1 765 78 0 43 chr2 155525219 155525335 -97731248 - HERVK14 LTR ERVK 0 5945 5835 357 166 0 20 chr2 155525335 155525405 -97731178 - MER41C LTR ERV1 -493 61 6 8222 52 33 7 chr2 155525405 155526428 -97730155 - HERVK14 LTR ERVK -181 5764 4715 * 12216 48 11 0 chr2 155526424 155527866 -97728717 - HERVK14 LTR ERVK -2660 3285 1828 2449 85 14 34 chr2 155529520 155529558 -97727025 - HERVK14 LTR ERVK -5583 362 325 8845 34 6 1 chr2 155529558 155531330 -97725253 + L1PA4 LINE L1 4379 6155 0 2449 85 14 34 chr2 155531330 155531644 -97724939 - HERVK14 LTR ERVK -5620 325 17 302 254 44 53 chr2 155531735 155531849 -97724734 - MARNA DNA Mariner -43 543 431 233 234 37 75 chr2 155532829 155532936 -97723647 + MER117 DNA MER1_type 5 107 -90 263 348 74 7 chr2 155532950 155533085 -97723498 - L2 LINE L2 -957 2357 2214 230 69 0 0 chr2 155533248 155533277 -97723306 - HSMAR1 DNA Mariner 0 1287 1259 734 180 7 14 chr2 155533458 155533597 -97722986 - L1M3e LINE L1 -6892 138 1 936 214 87 15 chr2 155533610 155533876 -97722707 + MER110 LTR ERV1 3 287 -204 935 241 55 17 chr2 155534578 155534868 -97721715 - L2 LINE L2 -1 3312 3012 307 266 113 16 chr2 155534920 155535044 -97721539 - LTR16A LTR ERVL -1 449 314 250 324 95 9 chr2 155535162 155535267 -97721316 - L2 LINE L2 -9 3263 3150 1229 79 35 45 chr2 155537859 155538061 -97718522 - THE1B LTR MaLR -164 200 1 801 274 38 29 chr2 155539069 155539417 -97717166 + L1P LINE L1 4350 4702 -1444 2411 82 0 0 chr2 155540793 155541084 -97715499 + AluSc SINE Alu 1 291 -18 21 0 0 0 chr2 155541370 155541391 -97715192 + AT_rich Low_complexity Low_complexity 1 21 0 8342 105 25 6 chr2 155542720 155544020 -97712563 - L1P LINE L1 -1764 4382 3058 3506 78 6 4 chr2 155544020 155544523 -97712060 - L1P LINE L1 -2717 3429 2926 568 250 23 51 chr2 155545284 155545460 -97711123 + MIR SINE MIR 20 190 -72 7018 44 5 6 chr2 155546305 155547276 -97709307 - L1PA4 LINE L1 -23 6132 5165 250 179 60 111 chr2 155547397 155547514 -97709069 + LTR16A1 LTR ERVL 1 111 -346 1547 201 0 7 chr2 155549484 155549768 -97706815 + AluJb SINE Alu 1 282 -30 183 143 36 18 chr2 155549770 155549826 -97706757 + (TA)n Simple_repeat Simple_repeat 2 58 0 180 0 0 0 chr2 155549828 155549848 -97706735 + (TG)n Simple_repeat Simple_repeat 1 20 0 367 310 80 0 chr2 155549875 155549988 -97706595 - MER5A DNA MER1_type -66 123 2 264 182 52 52 chr2 155549996 155550073 -97706510 - MIR SINE MIR -110 152 76 979 268 22 0 chr2 155550096 155550372 -97706211 - L1M4 LINE L1 -3022 3124 2843 1111 193 5 14 chr2 155550374 155550592 -97705991 - L1MEc LINE L1 -6138 258 43 239 259 247 0 chr2 155550775 155550856 -97705727 + L2 LINE L2 3159 3259 -13 185 65 32 0 chr2 155551151 155551182 -97705401 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 484 211 0 32 chr2 155552384 155552479 -97704104 + MER21B LTR ERV1 1 92 -771 2191 246 92 44 chr2 155552494 155553251 -97703332 + MER21B LTR ERV1 16 809 -54 384 358 0 0 chr2 155556579 155556727 -97699856 - MIR SINE MIR 0 262 115 1599 173 33 16 chr2 155556818 155557125 -97699458 + AluJo SINE Alu 1 312 0 713 174 0 50 chr2 155557299 155557420 -97699163 - FRAM SINE Alu -69 107 1 1830 147 41 0 chr2 155558716 155559009 -97697574 - AluSg SINE Alu -5 305 1 258 348 0 80 chr2 155559133 155559271 -97697312 - L2 LINE L2 -1 3271 3145 271 292 97 18 chr2 155559490 155559603 -97696980 + LTR33 LTR ERVL 38 159 -362 475 259 74 0 chr2 155559723 155559885 -97696698 + LTR33 LTR ERVL 348 521 0 11212 183 76 10 chr2 155559956 155564525 -97692058 + L1PBa LINE L1 221 5091 -1771 377 263 84 44 chr2 155565333 155565539 -97691044 + MLT1L LTR MaLR 99 391 -201 617 331 189 12 chr2 155565903 155566405 -97690178 + L2 LINE L2 1000 1590 -1724 441 206 147 88 chr2 155566398 155566568 -97690015 + MER5A DNA MER1_type 9 188 -1 * 392 279 124 48 chr2 155566579 155566894 -97689689 + L2 LINE L2 1580 1918 -1396 1390 230 101 20 chr2 155566896 155567378 -97689205 + MER39 LTR ERV1 6 707 0 1574 309 130 32 chr2 155567420 155568577 -97688006 + L2 LINE L2 1973 3236 -77 180 0 0 0 chr2 155568659 155568679 -97687904 + (CAA)n Simple_repeat Simple_repeat 1 20 0 335 357 14 0 chr2 155569247 155569390 -97687193 - MIR SINE MIR -20 242 98 466 114 13 38 chr2 155569455 155569534 -97687049 - MADE1 DNA Mariner 0 80 4 708 299 66 49 chr2 155570109 155570534 -97686049 - MLT1K LTR MaLR 0 588 157 221 349 51 42 chr2 155572511 155572726 -97683857 + L2 LINE L2 2545 2761 -553 188 170 21 21 chr2 155572828 155572875 -97683708 + L2 LINE L2 3255 3301 -12 375 310 18 0 chr2 155573095 155573208 -97683375 - LTR16C LTR ERVL -233 258 144 526 329 39 83 chr2 155573560 155573946 -97682637 - HERV16 LTR ERVL -2271 2725 2357 1456 115 64 98 chr2 155574401 155574697 -97681886 - AluJb SINE Alu -12 300 15 996 287 92 30 chr2 155576237 155576728 -97679855 - LTR33 LTR ERVL 0 521 1 343 268 81 24 chr2 155576973 155577096 -97679487 - L2 LINE L2 -4 3268 3139 7924 40 0 0 chr2 155577668 155578656 -97677927 - L1PA4 LINE L1 -3 6152 5165 250 179 60 111 chr2 155578777 155578894 -97677689 + LTR16A1 LTR ERVL 1 111 -346 341 319 22 30 chr2 155579600 155579735 -97676848 - MIR SINE MIR -75 187 54 2259 77 24 7 chr2 155581057 155581354 -97675229 + AluSx SINE Alu 1 302 -10 197 84 0 84 chr2 155581887 155581958 -97674625 + (TTTTTG)n Simple_repeat Simple_repeat 3 67 0 2188 104 0 46 chr2 155582065 155582392 -97674191 + AluSx SINE Alu 1 312 0 22 56 0 0 chr2 155583112 155583148 -97673435 + AT_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr2 155584908 155584933 -97671650 + AT_rich Low_complexity Low_complexity 1 25 0 556 279 92 25 chr2 155586285 155586525 -97670058 - MIR SINE MIR -6 256 1 21 36 0 0 chr2 155586892 155586920 -97669663 + AT_rich Low_complexity Low_complexity 1 28 0 2658 33 0 10 chr2 155587032 155587339 -97669244 + AluY SINE Alu 1 304 -7 526 273 12 18 chr2 155588865 155589030 -97667553 + MIR SINE MIR 78 241 -21 750 255 127 15 chr2 155589440 155589699 -97666884 - L2 LINE L2 -5 3308 3021 3300 163 48 5 chr2 155589703 155590312 -97666271 - MER73 LTR ERVL 0 644 10 1653 254 157 18 chr2 155590312 155590969 -97665614 - L2 LINE L2 -298 3015 2269 1220 238 85 44 chr2 155590976 155591613 -97664970 + L1M3 LINE L1 4817 5485 -695 4094 122 54 9 chr2 155591613 155592259 -97664324 - L1MA3 LINE L1 0 6305 5631 1220 238 85 44 chr2 155592259 155592278 -97664305 + L1M3 LINE L1 5485 5502 -678 * 7687 155 14 1 chr2 155592266 155593567 -97663016 - L1M1 LINE L1 -602 5703 4421 221 0 0 33 chr2 155593567 155593597 -97662986 + (TTTC)n Simple_repeat Simple_repeat 4 32 0 2115 122 4 0 chr2 155593599 155593878 -97662705 - AluSx SINE Alu -32 280 1 7687 155 14 1 chr2 155593878 155594377 -97662206 - L1M1 LINE L1 -1884 4421 3874 1325 234 10 33 chr2 155594428 155594825 -97661758 + L1ME2 LINE L1 5722 6109 -55 2907 141 12 14 chr2 155595648 155596167 -97660416 - L1MA9 LINE L1 0 6312 5795 23 33 0 0 chr2 155596363 155596393 -97660190 + AT_rich Low_complexity Low_complexity 1 30 0 1532 219 59 11 chr2 155597173 155597530 -97659053 + MLT1A2 LTR MaLR 1 374 0 539 286 93 44 chr2 155597592 155597840 -97658743 + MIR SINE MIR 2 261 -1 300 242 221 40 chr2 155597939 155598088 -97658495 + MIR3 SINE MIR 9 184 -24 325 277 131 8 chr2 155598512 155598642 -97657941 - MIR SINE MIR 0 262 117 881 102 14 14 chr2 155598654 155598801 -97657782 + L1MA3 LINE L1 6152 6298 -7 277 205 148 66 chr2 155603154 155603276 -97653307 + LTR33A LTR ERVL 4 135 -388 481 221 0 9 chr2 155603365 155603478 -97653105 + LTR33A LTR ERVL 405 516 -7 1072 198 22 11 chr2 155603970 155604238 -97652345 + L1MB2 LINE L1 5133 5403 -743 15573 134 21 104 chr2 155604253 155607978 -97648605 + L1P LINE L1 12 3429 -2717 15843 91 6 0 chr2 155607978 155611045 -97645538 + L1PA7 LINE L1 3058 6154 0 3467 179 22 21 chr2 155611080 155611853 -97644730 + L1MB2 LINE L1 5397 6170 -1 299 301 107 0 chr2 155612188 155612199 -97644384 + MIR SINE MIR 32 40 -222 2267 109 0 0 chr2 155612199 155612492 -97644091 + AluSx SINE Alu 3 295 -17 299 301 107 0 chr2 155612492 155612583 -97644000 + MIR SINE MIR 40 145 -117 302 330 61 0 chr2 155613419 155613534 -97643049 + MIR SINE MIR 101 222 -40 1565 239 55 40 chr2 155614282 155614831 -97641752 + L1ME3A LINE L1 5609 6165 -5 1229 262 82 24 chr2 155614868 155615322 -97641261 + MER74B LTR ERVL 69 548 -74 252 0 0 0 chr2 155616214 155616242 -97640341 + (A)n Simple_repeat Simple_repeat 1 28 0 316 302 43 9 chr2 155616575 155616691 -97639892 - MIR SINE MIR 0 262 143 245 317 0 0 chr2 155618018 155618078 -97638505 + polypurine Low_complexity Low_complexity 3 62 0 555 239 161 44 chr2 155618158 155618363 -97638220 + L2 LINE L2 3082 3310 -3 280 328 45 8 chr2 155618672 155618806 -97637777 + L1ME LINE L1 5407 5545 -576 21 0 0 0 chr2 155619829 155619850 -97636733 + AT_rich Low_complexity Low_complexity 1 21 0 4190 94 36 23 chr2 155620256 155620803 -97635780 - L1PB2 LINE L1 -1 6150 5592 2694 10 0 3 chr2 155620803 155621101 -97635482 - AluY SINE Alu -14 297 1 4190 94 36 23 chr2 155621101 155621199 -97635384 - L1PB2 LINE L1 -559 5592 5497 431 269 9 0 chr2 155621199 155621307 -97635276 + MER94 DNA DNA 26 134 0 297 242 0 0 chr2 155621389 155621455 -97635128 - MLT1L LTR MaLR -549 66 1 3140 113 17 2 chr2 155621735 155622215 -97634368 - LTR15 LTR ERV1 -6 487 1 1940 153 3 0 chr2 155623264 155623552 -97633031 - AluJo SINE Alu -23 289 1 282 361 104 7 chr2 155625679 155625823 -97630760 + L2 LINE L2 3106 3263 -9 266 266 113 16 chr2 155625941 155626065 -97630518 + LTR16A LTR ERVL 314 449 -1 971 238 55 17 chr2 155626117 155626407 -97630176 + L2 LINE L2 3012 3312 -1 2201 119 0 13 chr2 155627256 155627559 -97629024 - AluSx SINE Alu -13 299 1 6101 99 47 4 chr2 155627968 155628967 -97627616 - L1PB2 LINE L1 -1 6150 5139 384 291 43 0 chr2 155629011 155629152 -97627431 - L1MEc LINE L1 -4610 1786 1640 4516 167 40 5 chr2 155629245 155629603 -97626980 - L1PB2 LINE L1 -2 6149 5805 423 0 0 0 chr2 155629603 155629650 -97626933 + (TA)n Simple_repeat Simple_repeat 1 47 0 4516 167 40 5 chr2 155629650 155631004 -97625579 - L1PB2 LINE L1 -346 5805 4380 1365 101 0 39 chr2 155632041 155632249 -97624334 + THE1B LTR MaLR 1 200 -164 237 313 12 0 chr2 155632487 155632570 -97624013 + CT-rich Low_complexity Low_complexity 2 85 0 181 212 0 0 chr2 155632697 155632730 -97623853 - L2 LINE L2 -339 2975 2943 204 135 0 0 chr2 155633672 155633709 -97622874 + (TC)n Simple_repeat Simple_repeat 2 38 0 323 185 15 0 chr2 155634029 155634094 -97622489 + LTR16C LTR ERVL 426 491 0 326 296 0 0 chr2 155634440 155634528 -97622055 + (CA)n Simple_repeat Simple_repeat 1 88 0 2188 148 56 0 chr2 155635115 155635492 -97621091 - MER57A LTR ERV1 -4 399 2 1719 146 70 59 chr2 155640916 155641287 -97615296 - THE1C LTR MaLR 0 375 1 209 273 55 0 chr2 155641891 155641946 -97614637 - L2 LINE L2 -1 3312 3255 201 266 43 93 chr2 155642130 155642269 -97614314 + MIR SINE MIR 21 152 -56 232 248 135 71 chr2 155643306 155643447 -97613136 + MER5A DNA MER1_type 26 175 -14 186 43 0 0 chr2 155643763 155643786 -97612797 + (TAAAA)n Simple_repeat Simple_repeat 4 26 0 220 291 87 36 chr2 155644645 155644764 -97611819 + MER5A DNA MER1_type 17 130 -48 800 177 134 0 chr2 155644861 155645025 -97611558 - MER5A DNA MER1_type 0 189 4 223 327 62 44 chr2 155645208 155645321 -97611262 + MER5A DNA MER1_type 74 188 -1 278 179 30 0 chr2 155645356 155645423 -97611160 - MER53 DNA DNA -102 87 19 1099 238 0 0 chr2 155646223 155646446 -97610137 - MER58A DNA MER1_type -1 223 1 612 174 31 122 chr2 155648463 155648659 -97607924 - MER5B DNA MER1_type 0 178 1 2499 58 3 16 chr2 155649945 155650258 -97606325 - AluY SINE Alu -2 309 1 522 280 120 18 chr2 155650787 155651012 -97605571 - MIR SINE MIR 0 262 15 2621 131 41 2 chr2 155651061 155651473 -97605110 + MSTA LTR MaLR 1 428 0 821 308 79 12 chr2 155652912 155653464 -97603119 + L2 LINE L2 2480 3064 -249 373 225 45 0 chr2 155653474 155653563 -97603020 - L2 LINE L2 0 3313 3221 234 311 0 16 chr2 155654405 155654466 -97602117 + MIR SINE MIR 33 92 -170 25 0 0 0 chr2 155654479 155654504 -97602079 + AT_rich Low_complexity Low_complexity 1 25 0 539 239 139 0 chr2 155655504 155655742 -97600841 + L1ME4a LINE L1 5835 6105 -16 252 219 0 31 chr2 155655909 155655973 -97600610 + (TATATG)n Simple_repeat Simple_repeat 3 64 0 180 320 0 0 chr2 155656064 155656114 -97600469 - MER5A DNA MER1_type -4 185 136 580 258 56 56 chr2 155658016 155658249 -97598334 + MIR SINE MIR 20 252 -10 537 381 18 0 chr2 155659058 155659276 -97597307 + MIR SINE MIR 19 240 -22 513 198 86 9 chr2 155659371 155659487 -97597096 + MIR SINE MIR 91 215 -47 606 267 172 55 chr2 155659618 155660085 -97596498 - L2 LINE L2 0 3313 2777 29 28 0 0 chr2 155662622 155662658 -97593925 + AT_rich Low_complexity Low_complexity 1 36 0 254 193 53 0 chr2 155662928 155662985 -97593598 + L3 LINE CR1 924 983 -594 228 385 0 8 chr2 155663256 155663378 -97593205 + L3 LINE CR1 984 1104 -473 299 253 0 72 chr2 155663381 155663464 -97593119 + L3 LINE CR1 1498 1574 -3 2342 98 3 7 chr2 155664017 155664323 -97592260 + AluSg SINE Alu 6 310 0 2418 85 0 0 chr2 155664827 155665122 -97591461 - AluSc SINE Alu -14 295 1 378 281 79 34 chr2 155666362 155666540 -97590043 + MIR SINE MIR 7 192 -70 1032 253 134 29 chr2 155667525 155667979 -97588604 + LTR33 LTR ERVL 16 517 -4 254 255 38 28 chr2 155669670 155669776 -97586807 - MIR SINE MIR -68 194 88 22 0 0 0 chr2 155669912 155669934 -97586649 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr2 155670668 155670697 -97585886 + AT_rich Low_complexity Low_complexity 1 29 0 234 316 87 28 chr2 155670772 155670990 -97585593 + L1MC4a LINE L1 4754 4984 -1162 23 0 0 0 chr2 155671031 155671054 -97585529 + AT_rich Low_complexity Low_complexity 1 23 0 366 240 97 38 chr2 155671057 155671324 -97585259 + L1MC5 LINE L1 7631 7913 -48 356 278 59 48 chr2 155671351 155671538 -97585045 + L1MC4a LINE L1 5052 5240 -906 900 270 84 29 chr2 155671556 155672034 -97584549 + L1MC4a LINE L1 5255 5758 -2050 219 188 0 0 chr2 155672047 155672095 -97584488 + (CA)n Simple_repeat Simple_repeat 1 48 0 329 305 62 15 chr2 155672124 155672383 -97584200 + L1MC4a LINE L1 5908 6178 -1630 351 113 0 0 chr2 155672958 155673011 -97583572 + (TA)n Simple_repeat Simple_repeat 2 54 0 498 221 110 37 chr2 155673418 155673581 -97583002 + MIR SINE MIR 83 257 -5 1408 120 36 13 chr2 155674492 155674717 -97581866 - MER30 DNA MER1_type 0 230 1 253 208 0 0 chr2 155674738 155674786 -97581797 - L2 LINE L2 0 3313 3266 2679 113 133 0 chr2 155675151 155675610 -97580973 - Tigger1 DNA MER2_type 0 2418 1899 768 168 0 0 chr2 155675610 155675723 -97580860 + AluJb SINE Alu 162 274 -38 207 0 0 0 chr2 155675731 155675754 -97580829 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6148 128 12 0 chr2 155675757 155676715 -97579868 - Tigger1 DNA MER2_type -1448 970 1 228 244 227 50 chr2 155677252 155677371 -97579212 + L2 LINE L2 3132 3271 -1 2274 90 24 0 chr2 155678154 155678443 -97578140 - AluSp SINE Alu -17 296 1 301 232 14 0 chr2 155678473 155678542 -97578041 - L1MC4 LINE L1 -1339 6703 6634 232 358 97 0 chr2 155678545 155678679 -97577904 - L2 LINE L2 -1 3312 3166 22 35 0 0 chr2 155680180 155680209 -97576374 + AT_rich Low_complexity Low_complexity 1 29 0 394 282 56 66 chr2 155680226 155680439 -97576144 - MIR SINE MIR -50 212 2 235 212 59 35 chr2 155681371 155681456 -97575127 - MIR3 SINE MIR -48 160 74 21 57 0 0 chr2 155682377 155682412 -97574171 + AT_rich Low_complexity Low_complexity 1 35 0 253 230 24 139 chr2 155684300 155684465 -97572118 + MIR SINE MIR 107 252 -10 6986 122 47 16 chr2 155686074 155687267 -97569316 + Tigger3b DNA MER2_type 1 1230 -1 225 0 0 0 chr2 155687267 155687292 -97569291 + (CA)n Simple_repeat Simple_repeat 2 26 0 * 351 0 0 0 chr2 155687291 155687330 -97569253 + (GA)n Simple_repeat Simple_repeat 2 40 0 1267 81 32 5 chr2 155687393 155687578 -97569005 - L1PA11 LINE L1 0 6174 5985 5401 120 14 0 chr2 155687578 155688439 -97568144 + L1P LINE L1 3759 4631 -1515 889 287 169 57 chr2 155688559 155689120 -97567463 + L3 LINE CR1 272 895 -682 266 179 0 0 chr2 155689256 155689312 -97567271 - MLT2B1 LTR ERVL 0 520 465 189 171 0 0 chr2 155689316 155689351 -97567232 + (TA)n Simple_repeat Simple_repeat 2 36 0 1378 167 135 40 chr2 155689356 155689738 -97566845 - MLT2B1 LTR ERVL -40 475 40 2552 105 24 11 chr2 155689992 155690362 -97566221 + THE1C LTR MaLR 1 375 0 1834 158 23 7 chr2 155694115 155694419 -97562164 - AluSx SINE Alu -3 309 1 207 0 0 0 chr2 155694434 155694457 -97562126 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 351 100 0 0 chr2 155695907 155695957 -97560626 - MIR SINE MIR -116 146 97 954 241 27 5 chr2 155696569 155696793 -97559790 + MIR SINE MIR 8 236 -26 1689 190 89 68 chr2 155696978 155697489 -97559094 + MLT1H LTR MaLR 1 409 0 803 228 72 77 chr2 155698022 155698567 -97558016 + LTR48 LTR ERV1 1 739 -4 810 252 10 19 chr2 155699919 155700125 -97556458 + MIR SINE MIR 49 252 -10 912 193 12 31 chr2 155702188 155702349 -97554234 - FRAM SINE Alu -21 155 1 2062 191 26 52 chr2 155702349 155702728 -97553855 + MLT2D LTR ERVL 1 369 -45 366 23 0 0 chr2 155702728 155702771 -97553812 + (CA)n Simple_repeat Simple_repeat 2 44 0 2062 191 26 52 chr2 155702771 155702815 -97553768 + MLT2D LTR ERVL 369 413 -1 2720 131 2 7 chr2 155703646 155704065 -97552518 - L1MB4 LINE L1 0 6180 5764 2045 132 39 49 chr2 155705540 155705926 -97550657 + MLT1B LTR MaLR 1 382 -8 243 303 67 59 chr2 155707435 155707554 -97549029 + L2 LINE L2 3137 3256 -16 207 69 0 0 chr2 155707653 155707682 -97548901 + (CACCC)n Simple_repeat Simple_repeat 3 31 0 1333 202 60 38 chr2 155707824 155708190 -97548393 - MLT1C LTR MaLR 0 467 94 2259 103 3 3 chr2 155708557 155708859 -97547724 - AluSc SINE Alu -7 302 1 384 257 23 15 chr2 155709603 155709783 -97546800 + MER41B LTR ERV1 114 428 -207 252 282 35 12 chr2 155710009 155710094 -97546489 + L2 LINE L2 3184 3270 -2 302 329 105 0 chr2 155710405 155710557 -97546026 - L2 LINE L2 -457 2857 2690 224 214 0 0 chr2 155710576 155710618 -97545965 + MER5B DNA MER1_type 11 52 -126 1596 263 189 54 chr2 155710693 155711858 -97544725 + HAL1 LINE L1 236 1641 -866 198 0 0 0 chr2 155711858 155711880 -97544703 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1596 263 189 54 chr2 155711880 155712179 -97544404 + HAL1 LINE L1 1641 1898 -609 447 263 27 28 chr2 155712210 155712497 -97544086 + HAL1 LINE L1 2036 2407 -100 587 89 13 0 chr2 155713131 155713210 -97543373 + MADE1 DNA Mariner 1 80 0 327 233 256 16 chr2 155713592 155713721 -97542862 + Charlie8 DNA MER1_type 2 161 -2256 199 286 88 0 chr2 155713970 155714061 -97542522 - L3b LINE CR1 -379 1204 1106 315 0 0 0 chr2 155714412 155714447 -97542136 + (CA)n Simple_repeat Simple_repeat 2 36 0 1970 148 0 0 chr2 155714540 155714867 -97541716 + AluSx SINE Alu 1 327 0 21 0 0 0 chr2 155715454 155715475 -97541108 + AT_rich Low_complexity Low_complexity 1 21 0 276 311 94 84 chr2 155715757 155716290 -97540293 + L2 LINE L2 2715 3255 -17 191 294 0 65 chr2 155717143 155717235 -97539348 + L3 LINE CR1 1019 1104 -473 1954 145 0 0 chr2 155717662 155717979 -97538604 + AluSx SINE Alu 1 317 0 327 206 258 0 chr2 155718064 155718161 -97538422 - MER58 DNA MER1_type -2298 122 1 287 377 46 8 chr2 155718190 155718320 -97538263 + L2 LINE L2 3138 3272 0 180 0 0 0 chr2 155718820 155718840 -97537743 + (T)n Simple_repeat Simple_repeat 1 20 0 1257 173 8 4 chr2 155719189 155719438 -97537145 + L1MC3 LINE L1 7528 7777 -8 812 176 0 0 chr2 155719552 155719671 -97536912 + FLAM_A SINE Alu 2 120 -13 469 283 0 67 chr2 155720102 155720282 -97536301 - MER5B DNA MER1_type 0 178 11 1127 186 42 30 chr2 155720412 155720648 -97535935 + MLT1C LTR MaLR 225 463 -4 1029 229 151 38 chr2 155721017 155721388 -97535195 + L2 LINE L2 2887 3299 -14 307 259 129 47 chr2 155722407 155722600 -97533983 - L3b LINE CR1 -187 1396 1188 201 295 126 21 chr2 155723219 155723314 -97533269 + L2 LINE L2 3168 3272 0 1631 166 7 50 chr2 155723511 155723812 -97532771 + AluJo SINE Alu 7 294 -18 471 243 33 79 chr2 155724489 155724703 -97531880 + L1ME LINE L1 5586 5789 -332 352 302 47 9 chr2 155724736 155724842 -97531741 - L2 LINE L2 -13 3300 3191 340 320 146 15 chr2 155725058 155725264 -97531319 + MIR SINE MIR 19 251 -11 220 330 66 0 chr2 155726247 155726338 -97530245 - L2 LINE L2 -8 3264 3168 2302 101 0 0 chr2 155726609 155726917 -97529666 - AluSx SINE Alu -4 308 1 2299 112 0 7 chr2 155727088 155727392 -97529191 - AluSx SINE Alu -10 302 1 465 255 97 102 chr2 155728166 155728527 -97528056 + L2 LINE L2 2951 3309 -4 25 31 0 0 chr2 155729449 155729481 -97527102 + AT_rich Low_complexity Low_complexity 1 32 0 303 289 145 24 chr2 155730279 155730445 -97526138 + MIR3 SINE MIR 19 204 -4 201 213 12 25 chr2 155730820 155730900 -97525683 + CT-rich Low_complexity Low_complexity 1 79 0 217 367 41 31 chr2 155732482 155732580 -97524003 - L2 LINE L2 -5 3267 3169 192 125 0 0 chr2 155734725 155734757 -97521826 + (CATA)n Simple_repeat Simple_repeat 3 34 0 1103 278 85 57 chr2 155734948 155735669 -97520914 + L1MEd LINE L1 561 1142 -4987 2555 148 28 35 chr2 155735669 155736103 -97520480 + Tigger2a DNA MER2_type 3 433 -1 1103 278 85 57 chr2 155736103 155736245 -97520338 + L1MEd LINE L1 1142 1279 -4850 269 267 10 20 chr2 155736259 155736360 -97520223 - L1M LINE L1 -2380 5428 5329 228 299 94 0 chr2 155736354 155736471 -97520112 + L1MEd LINE L1 1323 1450 -4681 * 2062 60 23 19 chr2 155738491 155738756 -97517827 - AluSc SINE Alu -26 283 18 210 146 0 49 chr2 155738774 155738815 -97517768 + (TTTTC)n Simple_repeat Simple_repeat 5 43 0 2025 65 0 0 chr2 155739690 155739935 -97516648 + L1PA5 LINE L1 5910 6154 0 26 30 0 0 chr2 155739938 155739971 -97516612 + AT_rich Low_complexity Low_complexity 1 33 0 1136 217 26 0 chr2 155740660 155740886 -97515697 - MIR SINE MIR -29 233 2 28 29 0 0 chr2 155741517 155741552 -97515031 + AT_rich Low_complexity Low_complexity 1 35 0 2222 120 0 13 chr2 155742526 155742835 -97513748 - AluSx SINE Alu -7 305 1 665 262 214 20 chr2 155742911 155743262 -97513321 + L2 LINE L2 2895 3313 0 486 261 151 5 chr2 155743420 155743608 -97512975 + MIR SINE MIR 15 211 -51 221 283 66 66 chr2 155743640 155743746 -97512837 - MIR SINE MIR -143 119 14 186 375 89 9 chr2 155744195 155744307 -97512276 + MIR3 SINE MIR 13 133 -75 1500 179 16 47 chr2 155744902 155745266 -97511317 + MLT1A1 LTR MaLR 11 363 -2 465 19 0 0 chr2 155746303 155746357 -97510226 + (TG)n Simple_repeat Simple_repeat 2 55 0 505 271 52 103 chr2 155750291 155750815 -97505768 + LTR33 LTR ERVL 12 508 -13 265 267 44 0 chr2 155751095 155751185 -97505398 + L1ME LINE L1 5730 5823 -298 2091 144 0 7 chr2 155751194 155751500 -97505083 + AluSx SINE Alu 2 305 -7 354 266 0 21 chr2 155751590 155751602 -97504981 - L1MC4 LINE L1 -1337 6705 6694 2392 67 7 3 chr2 155751602 155751901 -97504682 + AluY SINE Alu 1 300 -11 354 266 0 21 chr2 155751901 155751982 -97504601 - L1MC4 LINE L1 -1348 6694 6614 345 300 0 0 chr2 155751908 155751998 -97504585 + L1MC4 LINE L1 6614 6703 -1339 * 418 292 187 24 chr2 155753434 155753653 -97502930 + MIR SINE MIR 7 259 -3 1470 203 128 52 chr2 155754021 155754523 -97502060 + MLT1F LTR MaLR 3 542 0 1760 148 0 15 chr2 155754743 155755013 -97501570 + AluSx SINE Alu 30 295 -17 848 285 43 4 chr2 155755254 155755507 -97501076 - L2 LINE L2 -1159 2155 1893 265 239 0 0 chr2 155755539 155755585 -97500998 - L2 LINE L2 -10 3262 3217 2035 144 34 0 chr2 155755914 155756268 -97500315 - Tigger7 DNA MER2_type 0 2487 2122 1165 204 125 8 chr2 155756264 155756528 -97500055 - Tigger7 DNA MER2_type -2188 299 5 * 304 305 8 46 chr2 155756885 155757016 -97499567 - MIR SINE MIR -46 216 91 2167 102 3 0 chr2 155757046 155757331 -97499252 + AluSx SINE Alu 1 286 -26 373 250 27 0 chr2 155758984 155759096 -97497487 + MER94 DNA DNA 1 115 -19 266 313 9 17 chr2 155759595 155759710 -97496873 - MIR SINE MIR -46 216 103 3721 257 82 28 chr2 155760118 155761589 -97494994 + L2 LINE L2 1746 3312 -1 8039 244 70 26 chr2 155761653 155762274 -97494309 + L1ME1 LINE L1 540 1132 -5103 2073 121 4 0 chr2 155762274 155762589 -97493994 + AluSx SINE Alu 1 316 0 8039 244 70 26 chr2 155762589 155763939 -97492644 + L1ME1 LINE L1 1132 2422 -3813 2285 102 60 26 chr2 155763939 155764291 -97492292 - THE1B LTR MaLR 0 364 1 8039 244 70 26 chr2 155764291 155764791 -97491792 + L1ME1 LINE L1 2422 2899 -3336 2433 165 26 82 chr2 155764791 155765374 -97491209 + MER44D DNA MER2_type 1 605 0 8039 244 70 26 chr2 155765374 155767232 -97489351 + L1ME1 LINE L1 2899 4675 -1560 707 146 22 15 chr2 155767232 155767369 -97489214 + L1MA6 LINE L1 6159 6296 -4 8039 244 70 26 chr2 155767369 155768207 -97488376 + L1ME1 LINE L1 4675 5904 -331 2166 134 0 3 chr2 155768207 155768513 -97488070 + AluSx SINE Alu 1 305 -7 8039 244 70 26 chr2 155768513 155768574 -97488009 + L1ME1 LINE L1 5904 5961 -274 764 195 3 18 chr2 155768631 155768818 -97487765 + L1MA10 LINE L1 5986 6332 -2 1860 134 0 7 chr2 155769390 155769666 -97486917 + AluSx SINE Alu 38 311 -1 323 249 92 23 chr2 155770051 155770268 -97486315 + MER113 DNA MER1_type? 71 302 -219 258 197 0 28 chr2 155770257 155770328 -97486255 - MER113 DNA MER1_type? -158 363 295 * 408 253 101 40 chr2 155770551 155770798 -97485785 - MER91A DNA MER1_type 0 196 6 225 0 0 0 chr2 155771843 155771868 -97484715 + (T)n Simple_repeat Simple_repeat 1 25 0 297 328 8 0 chr2 155771984 155772106 -97484477 + MER117 DNA MER1_type 7 129 -68 368 123 68 0 chr2 155772965 155773038 -97483545 + MER53 DNA DNA 1 78 -111 2401 98 0 6 chr2 155773629 155773944 -97482639 - AluSq SINE Alu 0 313 1 467 138 12 0 chr2 155774753 155774833 -97481750 + MER53 DNA DNA 1 81 -108 234 237 0 0 chr2 155776058 155776155 -97480428 + CT-rich Low_complexity Low_complexity 2 98 0 212 178 24 41 chr2 155776202 155776371 -97480212 + (TCTCTG)n Simple_repeat Simple_repeat 6 171 0 * 219 221 25 0 chr2 155776334 155776456 -97480127 + (TCTG)n Simple_repeat Simple_repeat 2 126 0 * 234 172 35 17 chr2 155776426 155776542 -97480041 + CT-rich Low_complexity Low_complexity 1 118 0 2301 105 0 13 chr2 155776964 155777277 -97479306 - AluSq SINE Alu -4 309 1 250 385 46 0 chr2 155778738 155778847 -97477736 + L3 LINE CR1 271 384 -1193 234 308 45 63 chr2 155779081 155779302 -97477281 + L2 LINE L2 178 394 -2920 1182 280 86 11 chr2 155779340 155779805 -97476778 - MLT1J LTR MaLR -11 500 1 234 241 0 17 chr2 155780222 155780280 -97476303 + CT-rich Low_complexity Low_complexity 1 57 0 328 345 100 35 chr2 155780588 155780878 -97475705 + L3 LINE CR1 480 788 -789 229 226 52 0 chr2 155780889 155781004 -97475579 + (TA)n Simple_repeat Simple_repeat 1 121 0 334 362 99 33 chr2 155781041 155781345 -97475238 + L3 LINE CR1 823 1146 -431 268 281 93 0 chr2 155782848 155782987 -97473596 - MER117 DNA MER1_type -1 196 45 374 224 102 0 chr2 155783187 155783285 -97473298 - MIR SINE MIR -36 226 119 382 351 12 18 chr2 155784381 155784549 -97472034 - MER5A DNA MER1_type 0 189 23 858 199 14 0 chr2 155784713 155784859 -97471724 - FRAM SINE Alu -20 156 9 1351 198 25 82 chr2 155785171 155785637 -97470946 + MLT1B LTR MaLR 1 390 0 393 303 50 25 chr2 155787029 155787270 -97469313 + MIR SINE MIR 16 262 0 553 238 139 92 chr2 155787594 155788163 -97468420 + L1MC4 LINE L1 6579 7119 -923 1546 112 43 121 chr2 155788163 155788492 -97468091 - AluSg SINE Alu 0 305 1 553 238 139 92 chr2 155788492 155789051 -97467532 + L1MC4 LINE L1 7119 7877 -165 240 257 14 29 chr2 155789559 155789629 -97466954 - MIR SINE MIR -6 256 188 483 219 69 75 chr2 155790341 155790501 -97466082 + L1ME3 LINE L1 5789 5947 -219 233 260 150 24 chr2 155790519 155790646 -97465937 + L1ME3 LINE L1 5922 6064 -98 2402 94 0 0 chr2 155791420 155791727 -97464856 - AluSx SINE Alu -5 307 1 1918 184 124 9 chr2 155791829 155792248 -97464335 + MLT1C LTR MaLR 1 467 0 198 333 29 0 chr2 155792291 155792360 -97464223 - MIR SINE MIR -114 148 78 325 274 88 53 chr2 155793031 155793144 -97463439 - L2 LINE L2 -6 3266 3150 1740 152 4 7 chr2 155793280 155793556 -97463027 - AluJo SINE Alu -31 281 7 276 288 79 14 chr2 155795710 155795849 -97460734 - L1ME LINE L1 -337 5784 5637 288 200 0 0 chr2 155797992 155798052 -97458531 + (TG)n Simple_repeat Simple_repeat 1 60 0 1057 237 79 20 chr2 155799217 155799450 -97457133 + L2 LINE L2 2834 3096 -217 2027 137 0 0 chr2 155799450 155799804 -97456779 + AluSx SINE Alu 1 354 0 1057 237 79 20 chr2 155799804 155799911 -97456672 + L2 LINE L2 3096 3195 -118 296 263 30 0 chr2 155799959 155800058 -97456525 + L2 LINE L2 3094 3195 -118 1737 155 0 0 chr2 155800095 155800346 -97456237 + AluSx SINE Alu 41 291 -21 250 330 10 48 chr2 155800571 155800674 -97455909 + MIR SINE MIR 151 249 -13 925 294 75 29 chr2 155801705 155802188 -97454395 - L2 LINE L2 -5 3308 2804 216 97 0 0 chr2 155802316 155802347 -97454236 + (CA)n Simple_repeat Simple_repeat 1 31 0 26 30 0 0 chr2 155803729 155803762 -97452821 + AT_rich Low_complexity Low_complexity 1 33 0 29 0 0 0 chr2 155804558 155804587 -97451996 + AT_rich Low_complexity Low_complexity 1 29 0 285 246 0 0 chr2 155805054 155805115 -97451468 - MER5A DNA MER1_type 0 189 129 2355 144 8 0 chr2 155805119 155805472 -97451111 + L1PA16 LINE L1 5796 6151 -15 231 226 0 16 chr2 155805488 155805550 -97451033 + GA-rich Low_complexity Low_complexity 4 64 0 3507 52 7 2 chr2 155805687 155806108 -97450475 + L1PA4 LINE L1 5730 6152 -3 260 254 159 0 chr2 155806216 155806279 -97450304 + MER58A DNA MER1_type 1 73 -34 1586 205 0 10 chr2 155806279 155806581 -97450002 + AluJb SINE Alu 1 299 -13 352 205 48 48 chr2 155806623 155806706 -97449877 - MER5A DNA MER1_type -103 86 4 233 280 149 9 chr2 155807614 155807721 -97448862 + MIR SINE MIR 28 149 -113 207 204 0 0 chr2 155809252 155809296 -97447287 + GA-rich Low_complexity Low_complexity 1 44 0 204 40 0 0 chr2 155809408 155809433 -97447150 + (A)n Simple_repeat Simple_repeat 1 25 0 2267 61 3 58 chr2 155810005 155810318 -97446265 + AluSp SINE Alu 2 297 -16 804 93 0 0 chr2 155810985 155811092 -97445491 + FRAM SINE Alu 56 162 -14 281 236 33 90 chr2 155811650 155811816 -97444767 + MLT1F LTR MaLR 236 542 0 658 285 92 0 chr2 155811885 155812092 -97444491 - MIR SINE MIR -30 232 7 217 217 22 0 chr2 155812241 155812287 -97444296 + C-rich Low_complexity Low_complexity 2 48 0 2135 132 0 0 chr2 155813371 155813674 -97442909 + AluSq SINE Alu 1 303 -10 429 263 12 100 chr2 155814104 155814264 -97442319 - MIR3 SINE MIR -47 161 16 25 0 0 0 chr2 155815071 155815096 -97441487 + AT_rich Low_complexity Low_complexity 1 25 0 225 256 0 0 chr2 155815614 155815657 -97440926 + (TG)n Simple_repeat Simple_repeat 2 44 0 205 228 63 38 chr2 155815725 155815804 -97440779 + MIR3 SINE MIR 122 202 -6 210 260 188 31 chr2 155815947 155816043 -97440540 + L2 LINE L2 3136 3246 -26 5030 197 31 24 chr2 155816356 155817399 -97439184 + L1MB7 LINE L1 4076 5110 -1074 1525 194 32 14 chr2 155817399 155817683 -97438900 - AluJo SINE Alu -17 295 7 5030 197 31 24 chr2 155817683 155818719 -97437864 + L1MB7 LINE L1 5110 6168 -16 649 251 48 13 chr2 155818785 155819012 -97437571 + L1ME4a LINE L1 5593 5827 -294 752 233 42 5 chr2 155819176 155819365 -97437218 - MER3 DNA MER1_type -5 204 9 490 290 18 27 chr2 155819666 155819890 -97436693 - L1M4 LINE L1 -6304 238 17 2121 107 0 0 chr2 155819948 155820219 -97436364 + AluSc SINE Alu 13 283 -26 519 262 35 110 chr2 155820224 155820374 -97436209 + L1ME4a LINE L1 5483 5643 -478 1774 120 0 0 chr2 155820374 155820616 -97435967 + AluSx SINE Alu 50 291 -21 519 262 35 110 chr2 155820616 155820826 -97435757 + L1ME4a LINE L1 5643 5809 -312 2361 66 3 3 chr2 155820826 155821115 -97435468 + AluY SINE Alu 1 289 -22 519 262 35 110 chr2 155821115 155821180 -97435403 + L1ME4a LINE L1 5809 5877 -244 210 118 0 0 chr2 155821222 155821256 -97435327 + (TA)n Simple_repeat Simple_repeat 2 35 0 194 352 172 0 chr2 155822655 155822800 -97433783 + L3 LINE CR1 1123 1292 -285 238 259 0 0 chr2 155822801 155822859 -97433724 - MER112 DNA MER1_type -7 253 196 303 245 212 33 chr2 155823261 155823412 -97433171 + MER5B DNA MER1_type 1 178 0 468 286 45 27 chr2 155823509 155823733 -97432850 + L1MCa LINE L1 23 229 -6194 5427 248 85 60 chr2 155823749 155824921 -97431662 + L1MCa LINE L1 932 2073 -4868 279 163 0 0 chr2 155824921 155824964 -97431619 + U2 snRNA snRNA 1 43 -145 5427 248 85 60 chr2 155824964 155825223 -97431360 + L1MCa LINE L1 2073 2324 -4617 888 216 83 29 chr2 155825223 155825427 -97431156 + MER58C DNA MER1_type 1 215 0 5427 248 85 60 chr2 155825427 155825675 -97430908 + L1MCa LINE L1 2324 2564 -4377 591 176 0 34 chr2 155825675 155825794 -97430789 + FRAM SINE Alu 1 40 0 5427 248 85 60 chr2 155825794 155828794 -97427789 + L1MCa LINE L1 2564 6089 -852 470 134 0 0 chr2 155829643 155829710 -97426873 + L2 LINE L2 3245 3311 -2 189 300 0 0 chr2 155830093 155830143 -97426440 + MIR SINE MIR 30 79 -129 749 240 128 50 chr2 155830643 155830980 -97425603 + MLT1L LTR MaLR 3 365 -250 447 163 22 22 chr2 155831166 155831258 -97425325 - AluJ/FRAM SINE Alu -5 307 216 281 294 284 0 chr2 155831313 155831422 -97425161 + L2 LINE L2 3133 3272 0 2240 106 0 13 chr2 155831764 155832067 -97424516 + AluSx SINE Alu 1 299 -13 228 35 0 0 chr2 155832067 155832096 -97424487 + (GA)n Simple_repeat Simple_repeat 2 30 0 207 114 0 0 chr2 155832123 155832158 -97424425 + (TC)n Simple_repeat Simple_repeat 2 36 0 266 278 38 53 chr2 155832424 155832557 -97424026 + MLT1K LTR MaLR 390 520 -68 440 159 11 11 chr2 155832884 155832972 -97423611 - MIR SINE MIR -105 157 70 370 295 119 81 chr2 155833197 155833928 -97422655 + L1M2 LINE L1 439 1270 -5579 304 329 92 48 chr2 155833739 155833988 -97422595 - L1M2 LINE L1 -5832 1017 758 * 215 237 66 53 chr2 155834312 155834388 -97422195 + L2 LINE L2 3140 3216 -56 390 21 0 0 chr2 155835040 155835087 -97421496 + (CA)n Simple_repeat Simple_repeat 1 47 0 1319 103 0 0 chr2 155836413 155836587 -97419996 + AluSq SINE Alu 135 308 -5 1743 223 39 37 chr2 155836656 155837064 -97419519 - LTR2 LTR ERV1 0 449 41 383 231 204 0 chr2 155837290 155837398 -97419185 + MIR SINE MIR 25 154 -108 2051 118 0 0 chr2 155838133 155838412 -97418171 + AluSx SINE Alu 1 279 -33 267 31 0 0 chr2 155838560 155838592 -97417991 + (CA)n Simple_repeat Simple_repeat 2 33 0 605 293 14 14 chr2 156038689 156038904 -97217679 - HAL1 LINE L1 -946 1561 1347 192 158 0 0 chr2 156040422 156040460 -97216123 + (TG)n Simple_repeat Simple_repeat 1 38 0 625 286 71 47 chr2 156040544 156041122 -97215461 - L1ME4a LINE L1 -276 5845 5254 2307 96 0 0 chr2 156041126 156041427 -97215156 - AluSq SINE Alu -12 301 1 424 183 199 8 chr2 156041437 156041513 -97215070 - L1MA10 LINE L1 -4 6330 6255 2468 228 41 30 chr2 156041513 156041620 -97214963 - L1ME1 LINE L1 -96 6070 5966 2370 152 23 30 chr2 156041620 156042055 -97214528 - MSTB1 LTR MaLR 0 432 1 2468 228 41 30 chr2 156042055 156042701 -97213882 - L1ME1 LINE L1 -200 5966 5309 * 3914 248 53 14 chr2 156042695 156044160 -97212423 + L1M4 LINE L1 3753 5274 -872 4402 176 35 36 chr2 156044182 156045287 -97211296 + L1MA9 LINE L1 4824 5952 -360 186 103 0 0 chr2 156045287 156045316 -97211267 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4402 176 35 36 chr2 156045316 156045639 -97210944 + L1MA9 LINE L1 5952 6274 -38 1170 174 4 54 chr2 156045751 156045993 -97210590 - AluJo SINE Alu -1 311 82 186 43 0 0 chr2 156046218 156046241 -97210342 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2333 60 0 0 chr2 156046243 156046524 -97210059 - AluY SINE Alu -30 281 1 1766 246 86 5 chr2 156047094 156047865 -97208718 - Charlie2 DNA MER1_type 0 2862 2030 558 283 35 39 chr2 156047867 156048097 -97208486 - Charlie2 DNA MER1_type -2623 239 11 311 262 36 12 chr2 156048114 156048198 -97208385 + MER5A DNA MER1_type 6 91 -98 317 318 0 9 chr2 156050883 156050993 -97205590 + L1M4 LINE L1 3955 4063 -2083 209 358 122 24 chr2 156051082 156051205 -97205378 - L2 LINE L2 -9 3304 3170 189 336 94 0 chr2 156051858 156051986 -97204597 - L2 LINE L2 -966 2348 2209 1920 190 22 3 chr2 156052719 156053077 -97203506 - MLT1A1 LTR MaLR 0 365 1 258 155 17 35 chr2 156053092 156053150 -97203433 - Charlie1a DNA MER1_type -5 1450 1394 9755 229 39 21 chr2 156053162 156060727 -97195856 + L1PB3 LINE L1 3 6869 -1 5797 199 33 19 chr2 156060737 156061434 -97195149 - Charlie1a DNA MER1_type -1351 1410 725 2409 73 0 10 chr2 156061434 156061748 -97194835 + AluY SINE Alu 1 311 0 5797 199 33 19 chr2 156061748 156062440 -97194143 - Charlie1a DNA MER1_type -2036 725 1 486 335 0 74 chr2 156062877 156063092 -97193491 - MIR SINE MIR -17 245 47 199 361 90 0 chr2 156063097 156063230 -97193353 + MIR SINE MIR 87 231 -31 2116 86 14 4 chr2 156063761 156064040 -97192543 - AluSc SINE Alu -9 300 19 317 268 120 42 chr2 156066102 156066244 -97190339 - MER5A DNA MER1_type -32 157 5 601 274 20 0 chr2 156066951 156067097 -97189486 - MIR SINE MIR -67 195 47 2611 184 56 5 chr2 156068211 156068799 -97187784 + L1MB7 LINE L1 5552 6169 -15 1095 165 131 17 chr2 156068873 156069164 -97187419 + MER33 DNA MER1_type 1 324 0 266 140 35 35 chr2 156069664 156069721 -97186862 - MER91C DNA MER1_type -22 118 62 312 345 35 14 chr2 156071430 156071575 -97185008 + L2 LINE L2 2913 3060 -212 2232 243 74 76 chr2 156071647 156072492 -97184091 - LTR28 LTR ERV1 -19 1736 890 279 0 0 0 chr2 156072492 156072523 -97184060 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 2232 243 74 76 chr2 156072523 156072778 -97183805 - LTR28 LTR ERV1 -865 890 1 282 296 173 19 chr2 156072911 156073073 -97183510 + MIR SINE MIR 76 262 0 243 320 103 0 chr2 156073130 156073227 -97183356 + L2 LINE L2 2947 3053 -219 1088 263 155 2 chr2 156073360 156073869 -97182714 + Charlie7 DNA MER1_type 58 644 -1968 975 186 180 12 chr2 156074084 156074418 -97182165 + Charlie1 DNA MER1_type 2372 2761 0 185 275 113 62 chr2 156074422 156074502 -97182081 + L2 LINE L2 3169 3252 -20 269 301 118 29 chr2 156074927 156075063 -97181520 + MER5A DNA MER1_type 7 154 -35 339 127 0 0 chr2 156075066 156075121 -97181462 - MER53 DNA DNA 0 189 135 680 209 80 6 chr2 156075321 156075484 -97181099 - MER5B DNA MER1_type 0 178 4 730 48 19 0 chr2 156075628 156075731 -97180852 + (TCTA)n Simple_repeat Simple_repeat 4 108 0 35 63 0 0 chr2 156076194 156076257 -97180326 + AT_rich Low_complexity Low_complexity 1 63 0 1866 124 0 11 chr2 156076552 156076825 -97179758 - AluSp SINE Alu -9 304 35 761 204 20 20 chr2 156077125 156077277 -97179306 + MER5B DNA MER1_type 27 178 0 1209 146 228 32 chr2 156078502 156078818 -97177765 - MLT1C LTR MaLR 0 467 90 2170 113 0 3 chr2 156078828 156079130 -97177453 - AluSg SINE Alu -9 301 1 492 101 29 0 chr2 156079187 156079256 -97177327 - tRNA-Glu-GAG tRNA tRNA -3 72 2 245 253 20 81 chr2 156079261 156079360 -97177223 - MLT1C LTR MaLR -374 93 1 261 301 70 28 chr2 156080325 156080468 -97176115 - MIR3 SINE MIR -5 203 55 1655 104 0 0 chr2 156080612 156080865 -97175718 - AluSg/x SINE Alu 0 321 69 217 342 120 8 chr2 156081117 156081234 -97175349 - MIR SINE MIR -85 177 48 372 285 162 44 chr2 156081368 156081596 -97174987 + MIR SINE MIR 3 257 -5 203 211 0 0 chr2 156081614 156081652 -97174931 - L2 LINE L2 -212 3060 3023 247 250 0 0 chr2 156082033 156082081 -97174502 + polypyrimidine Low_complexity Low_complexity 1 48 0 1641 178 0 60 chr2 156082143 156082475 -97174108 + AluJo SINE Alu 1 312 0 730 298 49 0 chr2 156083565 156083770 -97172813 + MIR SINE MIR 28 242 -20 297 326 132 62 chr2 156083820 156084124 -97172459 + L2 LINE L2 2948 3272 0 218 195 0 0 chr2 156084125 156084166 -97172417 + (CAAT)n Simple_repeat Simple_repeat 2 42 0 32 43 0 0 chr2 156085584 156085630 -97170953 + AT_rich Low_complexity Low_complexity 1 46 0 3246 134 82 15 chr2 156086436 156087031 -97169552 + MER41B LTR ERV1 1 635 0 1523 214 32 47 chr2 156087352 156087820 -97168763 - MLT1C LTR MaLR 0 467 7 297 227 83 23 chr2 156088010 156088142 -97168441 - MLT1L LTR MaLR -2 613 474 320 283 162 17 chr2 156088563 156088736 -97167847 + MIR3 SINE MIR 6 203 -5 202 179 26 17 chr2 156088835 156088952 -97167631 + (TA)n Simple_repeat Simple_repeat 1 118 0 24 0 0 0 chr2 156088953 156088977 -97167606 + AT_rich Low_complexity Low_complexity 1 24 0 21 71 0 0 chr2 156090029 156090071 -97166512 + AT_rich Low_complexity Low_complexity 1 42 0 1806 167 0 0 chr2 156090073 156090355 -97166228 + AluJb SINE Alu 1 282 -30 1909 258 82 10 chr2 156090448 156091284 -97165299 - Charlie2 DNA MER1_type -110 2752 1856 225 224 12 71 chr2 156091292 156091377 -97165206 - Charlie2 DNA MER1_type -2464 318 239 587 301 141 51 chr2 156091494 156091962 -97164621 + L3 LINE CR1 1057 1566 -11 390 277 126 35 chr2 156093091 156093178 -97163405 - HAL1 LINE L1 -168 2339 2261 282 95 0 0 chr2 156093178 156093220 -97163363 + (CA)n Simple_repeat Simple_repeat 2 43 0 390 277 126 35 chr2 156093220 156093536 -97163047 - HAL1 LINE L1 -246 2261 1899 396 323 161 62 chr2 156095010 156095332 -97161251 - L2 LINE L2 -1 3271 2918 2183 142 13 8 chr2 156095458 156095831 -97160752 - THE1C LTR MaLR 0 375 1 2827 80 33 51 chr2 156096296 156096699 -97159884 + MLT2A1 LTR ERVL 1 397 -47 225 0 0 0 chr2 156096699 156096724 -97159859 + (CA)n Simple_repeat Simple_repeat 2 26 0 2827 80 33 51 chr2 156096724 156096772 -97159811 + MLT2A1 LTR ERVL 397 444 0 2138 128 0 0 chr2 156096938 156097234 -97159349 + AluY SINE Alu 1 296 -15 596 221 35 0 chr2 156097243 156097356 -97159227 - FLAM_C SINE Alu -24 119 3 2214 148 56 15 chr2 156097656 156098067 -97158516 + MSTA LTR MaLR 1 428 0 350 169 0 0 chr2 156098158 156098217 -97158366 - L1MA4 LINE L1 -420 5877 5819 2107 157 33 14 chr2 156098217 156098630 -97157953 + L1MA4 LINE L1 5864 6291 -9 371 223 0 10 chr2 156100349 156100452 -97156131 + (CATATA)n Simple_repeat Simple_repeat 5 106 0 254 214 114 30 chr2 156100679 156100767 -97155816 - L1M4 LINE L1 -2824 3322 3218 2329 76 0 47 chr2 156100767 156101084 -97155499 - AluY SINE Alu -9 302 1 254 214 114 30 chr2 156101084 156101126 -97155457 - L1M4 LINE L1 -2928 3218 3181 1171 183 149 77 chr2 156101140 156101697 -97154886 + L1ME2 LINE L1 3876 4472 -1674 1416 99 14 0 chr2 156101697 156101908 -97154675 + L1PB1 LINE L1 5938 6151 0 1543 248 65 23 chr2 156102099 156102751 -97153832 + L1ME2 LINE L1 4496 5182 -964 2288 112 0 3 chr2 156102751 156103054 -97153529 + AluSx SINE Alu 1 302 -10 1543 248 65 23 chr2 156103054 156103104 -97153479 + L1ME2 LINE L1 5182 5228 -918 1834 239 124 13 chr2 156103108 156103617 -97152966 + L1ME2 LINE L1 5368 5978 -186 2403 76 0 13 chr2 156103617 156103931 -97152652 + AluY SINE Alu 1 310 -1 1834 239 124 13 chr2 156103931 156104124 -97152459 + L1ME2 LINE L1 5978 6148 -16 595 304 12 0 chr2 156104516 156104677 -97151906 - MIR3 SINE MIR -12 196 34 35 54 0 0 chr2 156107175 156107231 -97149352 + AT_rich Low_complexity Low_complexity 1 56 0 2157 79 4 4 chr2 156107441 156107720 -97148863 + AluY SINE Alu 1 279 -32 291 114 0 0 chr2 156107721 156107765 -97148818 + (TAA)n Simple_repeat Simple_repeat 2 45 0 275 240 91 38 chr2 156109815 156109940 -97146643 - MIR SINE MIR -77 131 31 192 292 0 0 chr2 156110425 156110473 -97146110 - MIR SINE MIR -151 111 64 288 0 0 0 chr2 156110489 156110521 -97146062 + (TTCA)n Simple_repeat Simple_repeat 4 35 0 285 286 95 62 chr2 156110524 156110765 -97145818 + L2 LINE L2 2716 2964 -350 537 278 0 26 chr2 156110843 156110994 -97145589 + L2 LINE L2 3164 3310 -3 509 248 40 0 chr2 156111237 156111362 -97145221 - MER94 DNA DNA -4 130 1 431 251 61 3 chr2 156111681 156111824 -97144759 - MIR SINE MIR -61 147 3 298 288 38 12 chr2 156111869 156112029 -97144554 + MER103 DNA DNA 2 165 -1 180 0 0 0 chr2 156114035 156114055 -97142528 + (TA)n Simple_repeat Simple_repeat 2 21 0 213 39 0 0 chr2 156114354 156114380 -97142203 + (A)n Simple_repeat Simple_repeat 1 26 0 412 268 78 39 chr2 156116695 156116848 -97139735 + MIR3 SINE MIR 45 203 -5 246 283 17 0 chr2 156117297 156117357 -97139226 + L2 LINE L2 3212 3272 0 212 250 0 0 chr2 156118453 156118497 -97138086 + CT-rich Low_complexity Low_complexity 1 44 0 227 316 74 21 chr2 156118498 156118593 -97137990 - L2 LINE L2 -28 3244 3145 247 269 69 77 chr2 156119859 156119989 -97136594 - L2 LINE L2 -11 3261 3133 22 0 0 0 chr2 156122926 156122948 -97133635 + AT_rich Low_complexity Low_complexity 1 22 0 202 132 26 0 chr2 156123300 156123338 -97133245 + T-rich Low_complexity Low_complexity 6 44 0 233 300 205 21 chr2 156126058 156126267 -97130316 - MIR SINE MIR -4 258 10 495 157 0 0 chr2 156128452 156128541 -97128042 + GA-rich Low_complexity Low_complexity 2 90 0 23 0 0 0 chr2 156134366 156134389 -97122194 + AT_rich Low_complexity Low_complexity 1 23 0 384 342 58 7 chr2 156134905 156135060 -97121523 - L2 LINE L2 0 3272 3110 2046 166 58 85 chr2 156135431 156135714 -97120869 + MLT1D LTR MaLR 1 265 -240 1556 157 72 65 chr2 156135714 156136007 -97120576 - AluJo SINE Alu -17 295 1 2046 166 58 85 chr2 156136007 156136242 -97120341 + MLT1D LTR MaLR 265 505 0 370 319 80 22 chr2 156137076 156137214 -97119369 - MIR3 SINE MIR -53 155 10 433 343 62 17 chr2 156137404 156137582 -97119001 - L2 LINE L2 0 3272 3087 2117 130 0 3 chr2 156138711 156139034 -97117549 - AluSc SINE Alu 0 309 1 2927 80 31 47 chr2 156139200 156139248 -97117335 - MLT2A1 LTR ERVL 0 444 397 207 0 0 0 chr2 156139248 156139271 -97117312 + (TG)n Simple_repeat Simple_repeat 2 24 0 2927 80 31 47 chr2 156139271 156139673 -97116910 - MLT2A1 LTR ERVL -47 397 1 2264 136 11 8 chr2 156140137 156140511 -97116072 + THE1C LTR MaLR 1 375 0 379 301 16 97 chr2 156140637 156140823 -97115760 + L2 LINE L2 2918 3088 -184 193 339 0 15 chr2 156140894 156140959 -97115624 + L2 LINE L2 3249 3312 -1 2006 158 7 0 chr2 156142477 156142787 -97113796 + AluSx SINE Alu 1 312 0 1975 140 0 71 chr2 156142797 156142937 -97113646 + AluJb SINE Alu 1 149 -163 1781 181 7 7 chr2 156142937 156143235 -97113348 + AluSx SINE Alu 1 298 -14 1975 140 0 71 chr2 156143235 156143430 -97113153 + AluJb SINE Alu 149 312 0 198 143 0 0 chr2 156145008 156145043 -97111540 + (CACCAT)n Simple_repeat Simple_repeat 4 38 0 205 338 52 13 chr2 156145755 156145832 -97110751 - L2 LINE L2 -84 3188 3109 2068 125 30 0 chr2 156146168 156146464 -97110119 - AluSx SINE Alu -7 305 1 350 169 0 0 chr2 156146492 156146551 -97110032 + L2 LINE L2 3255 3313 0 392 294 76 8 chr2 156147149 156147268 -97109315 + L2 LINE L2 3146 3272 0 1809 267 67 6 chr2 156147476 156148016 -97108567 - MER90 LTR ERV1 -2 573 1 4954 213 33 23 chr2 156148138 156149353 -97107230 + L1M2 LINE L1 4027 5256 -1011 2253 87 6 40 chr2 156149353 156149675 -97106908 - AluY SINE Alu 0 311 1 4954 213 33 23 chr2 156149675 156149947 -97106636 + L1M2 LINE L1 5256 5524 -743 219 167 0 0 chr2 156149954 156149996 -97106587 + GA-rich Low_complexity Low_complexity 2 43 0 3426 148 54 16 chr2 156150006 156150677 -97105906 + L1MB4 LINE L1 5485 6180 0 2303 100 0 0 chr2 156151870 156152171 -97104412 + AluSc SINE Alu 5 305 -4 2511 239 32 42 chr2 156153275 156154077 -97102506 + MER21B LTR ERV1 1 794 -69 674 277 115 8 chr2 156154579 156154814 -97101769 - MIR SINE MIR 0 262 3 237 111 0 0 chr2 156155238 156155274 -97101309 + tRNA-Gln-CAG tRNA tRNA 3 38 -37 1995 131 10 3 chr2 156155402 156155692 -97100891 - AluSg SINE Alu -18 292 1 1251 298 96 0 chr2 156155935 156156385 -97100198 - LTR33 LTR ERVL -10 511 19 500 258 132 12 chr2 156157194 156157361 -97099222 - MIR SINE MIR 0 262 76 247 227 134 21 chr2 156157617 156157714 -97098869 + MLT1K LTR MaLR 455 562 -26 214 179 0 0 chr2 156158025 156158064 -97098519 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 2421 62 0 28 chr2 156158155 156158475 -97098108 - AluY SINE Alu 0 311 1 1533 141 18 110 chr2 156158579 156158962 -97097621 - MER7A DNA MER2_type 0 346 1 288 265 298 5 chr2 156159177 156159360 -97097223 - MIR SINE MIR 0 262 28 318 299 130 43 chr2 156161416 156161810 -97094773 - L2 LINE L2 0 3313 2593 22 0 0 0 chr2 156161944 156161966 -97094617 + AT_rich Low_complexity Low_complexity 1 22 0 218 333 0 0 chr2 156162082 156162151 -97094432 + (TATATG)n Simple_repeat Simple_repeat 4 72 0 507 293 109 17 chr2 156162326 156162621 -97093962 - L1M4 LINE L1 -1112 5034 4714 204 40 0 0 chr2 156163785 156163810 -97092773 + (TC)n Simple_repeat Simple_repeat 1 25 0 * 387 0 0 0 chr2 156163809 156163852 -97092731 + (CA)n Simple_repeat Simple_repeat 1 43 0 2176 145 33 19 chr2 156164554 156164913 -97091670 - THE1B LTR MaLR 0 364 1 11319 94 17 1 chr2 156164913 156166468 -97090115 - THE1B-int LTR MaLR 0 1580 1 2203 134 39 20 chr2 156166468 156166825 -97089758 - THE1B LTR MaLR 0 364 1 27 29 0 0 chr2 156167400 156167434 -97089149 + AT_rich Low_complexity Low_complexity 1 34 0 318 292 77 23 chr2 156167833 156167963 -97088620 - MIR3 SINE MIR -43 165 29 230 114 0 0 chr2 156168509 156168544 -97088039 + Charlie8 DNA MER1_type 242 276 -2141 30 0 0 0 chr2 156170167 156170197 -97086386 + AT_rich Low_complexity Low_complexity 1 30 0 255 375 27 0 chr2 156170211 156170323 -97086260 + MIR SINE MIR 48 162 -100 27 0 0 0 chr2 156172389 156172416 -97084167 + AT_rich Low_complexity Low_complexity 1 27 0 240 266 0 0 chr2 156173338 156173402 -97083181 + A-rich Low_complexity Low_complexity 1 64 0 22 35 0 0 chr2 156173496 156173525 -97083058 + AT_rich Low_complexity Low_complexity 1 29 0 23 68 0 0 chr2 156173688 156173732 -97082851 + AT_rich Low_complexity Low_complexity 1 44 0 258 355 0 28 chr2 156174190 156174297 -97082286 - MIR3 SINE MIR -15 193 90 279 347 127 41 chr2 156174597 156174842 -97081741 - L2 LINE L2 -15 3257 2992 222 37 0 0 chr2 156175157 156175184 -97081399 + (A)n Simple_repeat Simple_repeat 1 27 0 218 250 15 29 chr2 156176498 156176566 -97080017 + L2 LINE L2 3246 3312 -1 240 192 42 108 chr2 156178516 156178636 -97077947 - MER53 DNA DNA 0 189 78 756 295 116 36 chr2 156178717 156179130 -97077453 + L2 LINE L2 2866 3311 -2 187 212 212 35 chr2 156179242 156179355 -97077228 - L3 LINE CR1 -289 1288 1156 * 307 264 99 50 chr2 156179321 156179442 -97077141 - L2 LINE L2 0 3272 3146 * 365 276 38 0 chr2 156179438 156179543 -97077040 + MIR SINE MIR 84 192 -70 2195 100 10 7 chr2 156179549 156179850 -97076733 + AluSx SINE Alu 1 302 -10 198 103 0 0 chr2 156181031 156181060 -97075523 + (A)n Simple_repeat Simple_repeat 1 29 0 1379 119 69 162 chr2 156183276 156183287 -97073296 - Charlie3 DNA MER1_type -64 2648 2638 4080 86 9 2 chr2 156183287 156183837 -97072746 + MER41A LTR ERV1 1 554 0 1379 119 69 162 chr2 156183837 156184128 -97072455 - Charlie3 DNA MER1_type -74 2638 1 397 281 66 0 chr2 156184871 156184992 -97071591 - MLT1I LTR MaLR -4 405 277 2070 147 0 0 chr2 156185008 156185320 -97071263 + AluSx SINE Alu 1 312 0 2274 110 13 0 chr2 156185438 156185747 -97070836 - AluSp SINE Alu 0 313 1 2155 134 7 0 chr2 156185751 156186056 -97070527 - AluSc SINE Alu -2 307 1 243 265 41 31 chr2 156187265 156187363 -97069220 + MLT1J LTR MaLR 1 99 -412 599 293 63 44 chr2 156187445 156187715 -97068868 + MLT1J LTR MaLR 230 504 -7 744 185 17 58 chr2 156188450 156188623 -97067960 - MER6B DNA MER2_type -40 170 5 345 318 58 29 chr2 156188625 156188798 -97067785 - MIR SINE MIR -52 210 33 246 344 80 32 chr2 156188924 156189049 -97067534 + MIR3 SINE MIR 7 137 -71 2134 97 38 0 chr2 156189178 156189467 -97067116 - AluSx SINE Alu -9 303 4 231 224 0 0 chr2 156191094 156191143 -97065440 - L2 LINE L2 0 3313 3265 2026 148 7 0 chr2 156191476 156191781 -97064802 + AluSx SINE Alu 1 307 -5 264 391 75 3 chr2 156192545 156192683 -97063900 + MIR SINE MIR 1 146 -62 265 301 82 36 chr2 156192879 156193075 -97063508 + MLT1H LTR MaLR 124 328 -221 254 271 29 0 chr2 156193228 156193298 -97063285 + MIR SINE MIR 163 234 -28 5120 85 6 3 chr2 156193595 156194310 -97062273 - L1PA13 LINE L1 0 6163 5447 2150 111 7 13 chr2 156194505 156194812 -97061771 - AluSg1 SINE Alu -2 307 3 2366 87 0 0 chr2 156195960 156196271 -97060312 - AluY SINE Alu 0 311 1 422 256 30 6 chr2 156196719 156196883 -97059700 - HAL1 LINE L1 -114 2393 2226 745 306 117 2 chr2 156196941 156197396 -97059187 - HAL1 LINE L1 -397 2110 1604 230 244 154 0 chr2 156197527 156197605 -97058978 + L2 LINE L2 3224 3313 0 182 360 54 37 chr2 156197699 156197802 -97058781 + L2 LINE L2 1917 2017 -1297 2550 64 0 0 chr2 156197802 156198113 -97058470 - AluY SINE Alu 0 311 1 182 360 54 37 chr2 156198113 156198306 -97058277 + L2 LINE L2 2017 2218 -1096 290 328 76 30 chr2 156198660 156198858 -97057725 + L2 LINE L2 2202 2408 -906 209 238 32 32 chr2 156198864 156198927 -97057656 - L2 LINE L2 -1 3271 3209 569 330 112 10 chr2 156198985 156199379 -97057204 + LTR16A LTR ERVL 17 450 0 1503 341 19 6 chr2 156199550 156200813 -97055770 + HERV16 LTR ERVL 257 1561 -3435 465 284 109 16 chr2 156201543 156201726 -97054857 + MIR SINE MIR 63 262 0 274 252 87 61 chr2 156201998 156202113 -97054470 - L2 LINE L2 -2 3270 3153 325 292 55 40 chr2 156202123 156202291 -97054292 - MIR SINE MIR -71 137 9 2596 129 44 5 chr2 156202601 156203013 -97053570 - MSTA LTR MaLR 0 428 1 2147 135 20 17 chr2 156204964 156205319 -97051264 - MLT1A1 LTR MaLR -8 357 2 2199 128 3 3 chr2 156205431 156205744 -97050839 + AluSp SINE Alu 1 313 0 12568 138 16 10 chr2 156206605 156208713 -97047870 - Tigger1 DNA MER2_type -269 2149 30 1732 120 40 0 chr2 156208759 156209035 -97047548 - Tigger1 DNA MER2_type -1517 901 615 268 240 20 0 chr2 156209858 156209958 -97046625 + GA-rich Low_complexity Low_complexity 4 105 0 1753 179 126 63 chr2 156210058 156210533 -97046050 + MLT2B2 LTR ERVL 1 505 -10 184 73 0 73 chr2 156211271 156211312 -97045271 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 21 0 0 0 chr2 156212109 156212130 -97044453 + AT_rich Low_complexity Low_complexity 1 21 0 1941 145 7 0 chr2 156212190 156212480 -97044103 + AluSx SINE Alu 1 292 -20 207 365 83 10 chr2 156212931 156213027 -97043556 + MIR SINE MIR 22 124 -138 2328 84 3 3 chr2 156213256 156213565 -97043018 - AluY SINE Alu -2 309 1 188 196 0 18 chr2 156213565 156213621 -97042962 + CT-rich Low_complexity Low_complexity 3 57 0 270 301 36 60 chr2 156213702 156213868 -97042715 + L2 LINE L2 2227 2388 -926 221 350 51 45 chr2 156214077 156214254 -97042329 + MIR SINE MIR 28 205 -57 186 250 0 0 chr2 156214312 156214352 -97042231 + L2 LINE L2 3266 3305 -8 24 0 0 0 chr2 156214883 156214907 -97041676 + AT_rich Low_complexity Low_complexity 1 24 0 701 257 41 45 chr2 156216937 156217031 -97039552 - MIR SINE MIR 0 262 169 2060 100 3 21 chr2 156217031 156217345 -97039238 + AluSx SINE Alu 1 309 0 701 257 41 45 chr2 156217345 156217494 -97039089 - MIR SINE MIR -93 169 19 208 280 0 0 chr2 156217530 156217580 -97039003 - L3 LINE CR1 -10 1567 1518 199 329 12 59 chr2 156217577 156217662 -97038921 - MIR SINE MIR -116 146 66 * 791 192 28 11 chr2 156217692 156217874 -97038709 - MER5A DNA MER1_type -4 185 1 4147 159 19 20 chr2 156219664 156221139 -97035444 + L1PB1 LINE L1 4320 5791 -360 272 120 20 0 chr2 156221139 156221189 -97035394 + (TA)n Simple_repeat Simple_repeat 1 51 0 2559 106 0 8 chr2 156221189 156221558 -97035025 + L1PB1 LINE L1 5773 6138 -13 24 0 0 0 chr2 156221659 156221683 -97034900 + AT_rich Low_complexity Low_complexity 1 24 0 516 203 16 23 chr2 156221934 156222062 -97034521 - MER103 DNA DNA -5 161 35 415 301 132 36 chr2 156222483 156222702 -97033881 + MIR SINE MIR 10 249 -13 306 0 0 0 chr2 156223741 156223775 -97032808 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 1021 211 7 76 chr2 156224519 156224794 -97031789 - MER63B DNA MER1_type -180 256 1 559 268 84 14 chr2 156225375 156225662 -97030921 + L1ME LINE L1 5306 5612 -558 495 306 28 25 chr2 156225937 156226221 -97030362 - L1MEc LINE L1 -4600 1796 1512 271 305 8 0 chr2 156226262 156226380 -97030203 + LTR33A LTR ERVL 405 523 0 6270 22 3 0 chr2 156226495 156227261 -97029322 - L1PA3 LINE L1 0 6155 5388 2030 24 0 0 chr2 156227261 156227509 -97029074 + L1P LINE L1 4569 4816 -1330 19493 156 16 10 chr2 156227529 156228850 -97027733 - L1P4 LINE L1 -590 5899 4586 2420 97 0 0 chr2 156228850 156229161 -97027422 + AluY SINE Alu 1 311 0 19493 156 16 10 chr2 156229161 156231804 -97024779 - L1P4 LINE L1 -1903 4586 1919 7243 138 35 29 chr2 156231795 156233089 -97023494 - L1P4 LINE L1 -5151 1310 10 * 6715 214 24 36 chr2 156233086 156235237 -97021346 - L1PA12 LINE L1 -4649 2925 7 * 21 0 0 0 chr2 156235910 156235931 -97020652 + AT_rich Low_complexity Low_complexity 1 21 0 1449 223 71 17 chr2 156236509 156236918 -97019665 - MER63B DNA MER1_type -2 434 4 181 310 95 52 chr2 156237086 156237202 -97019381 - MER5B DNA MER1_type -57 121 1 46 19 0 0 chr2 156238057 156238110 -97018473 + AT_rich Low_complexity Low_complexity 1 53 0 413 301 23 0 chr2 156238111 156238244 -97018339 + MIR SINE MIR 122 257 -5 243 333 12 0 chr2 156238247 156238331 -97018252 - MIR SINE MIR -118 144 60 21 36 0 0 chr2 156238506 156238534 -97018049 + AT_rich Low_complexity Low_complexity 1 28 0 1944 152 3 7 chr2 156238792 156239094 -97017489 + AluSq SINE Alu 1 301 -12 865 217 47 14 chr2 156239394 156239606 -97016977 + MER20 DNA MER1_type 1 219 0 862 250 23 18 chr2 156239774 156239994 -97016589 + MER58A DNA MER1_type 4 224 0 1910 151 3 14 chr2 156240022 156240350 -97016233 - AluSx SINE Alu 0 325 1 489 286 40 50 chr2 156240640 156240937 -97015646 + L1MEc LINE L1 1503 1796 -4600 33 43 0 0 chr2 156241225 156241272 -97015311 + AT_rich Low_complexity Low_complexity 1 47 0 932 294 89 26 chr2 156241272 156242827 -97013756 + L1MEc LINE L1 2156 3801 -2414 604 281 189 8 chr2 156242968 156243591 -97012992 + L1MEc LINE L1 3998 4733 -1482 543 122 0 0 chr2 156243807 156243881 -97012702 - MER66A LTR ERV1 0 478 405 2906 237 87 16 chr2 156243985 156244530 -97012053 - L1M4 LINE L1 -2824 3322 2817 2241 100 0 19 chr2 156244530 156244839 -97011744 - AluY SINE Alu -8 303 1 2906 237 87 16 chr2 156244839 156245403 -97011180 - L1M4 LINE L1 -3329 2817 2134 325 350 63 14 chr2 156246197 156246340 -97010243 - MIR3 SINE MIR -39 169 20 351 310 44 109 chr2 156246380 156246454 -97010129 + L3b LINE CR1 1177 1254 -329 2345 130 13 16 chr2 156246454 156246830 -97009753 - THE1C LTR MaLR 0 375 1 351 310 44 109 chr2 156246830 156247094 -97009489 + L3b LINE CR1 1254 1493 -90 2265 102 0 7 chr2 156247817 156248120 -97008463 - AluSg SINE Alu -9 301 1 198 242 97 16 chr2 156248624 156248686 -97007897 + MIR SINE MIR 48 114 -148 1574 202 31 52 chr2 156249244 156249631 -97006952 - MLT1B LTR MaLR -11 379 1 28 86 0 0 chr2 156251377 156251447 -97005136 + AT_rich Low_complexity Low_complexity 1 70 0 749 192 0 0 chr2 156251458 156251583 -97005000 - FRAM SINE Alu -23 153 29 381 281 138 42 chr2 156252547 156252714 -97003869 - MIR3 SINE MIR -3 205 23 283 318 78 8 chr2 156252850 156252979 -97003604 + MIR SINE MIR 82 219 -43 200 133 33 33 chr2 156253769 156253829 -97002754 + (TATAA)n Simple_repeat Simple_repeat 3 62 0 515 233 94 83 chr2 156253842 156254435 -97002148 + HAL1 LINE L1 859 1458 -1049 233 206 0 16 chr2 156254459 156254492 -97002091 + (CATATA)n Simple_repeat Simple_repeat 2 35 -28 2411 147 28 32 chr2 156254492 156254928 -97001655 - Tigger2a DNA MER2_type 0 434 1 233 206 0 16 chr2 156254928 156254957 -97001626 + (CATATA)n Simple_repeat Simple_repeat 35 63 0 487 0 32 0 chr2 156254958 156255021 -97001562 + (TAGA)n Simple_repeat Simple_repeat 1 65 0 1919 102 0 0 chr2 156255217 156255471 -97001112 - AluSc SINE Alu -55 254 1 380 272 54 88 chr2 156255563 156255802 -97000781 + HAL1 LINE L1 1802 2032 -475 368 279 108 31 chr2 156256153 156256411 -97000172 + HAL1 LINE L1 2169 2446 -61 292 304 88 8 chr2 156256423 156256548 -97000035 + MLT1L LTR MaLR 8 142 -473 514 283 83 0 chr2 156256749 156256929 -96999654 + MLT1L LTR MaLR 417 611 -4 774 272 84 65 chr2 156257264 156257910 -96998673 - L1MC4a LINE L1 -1895 5913 5256 2109 100 30 3 chr2 156258556 156258891 -96997692 - AluY SINE Alu 0 347 5 233 289 26 0 chr2 156259744 156259820 -96996763 - MIR3 SINE MIR -6 202 125 22 0 0 0 chr2 156260570 156260592 -96995991 + AT_rich Low_complexity Low_complexity 1 22 0 474 200 106 102 chr2 156263981 156264216 -96992367 - MER106A DNA MER1_type 0 236 1 2377 130 16 3 chr2 156264775 156265145 -96991438 + THE1C LTR MaLR 1 375 0 6719 103 41 40 chr2 156265145 156266600 -96989983 + THE1C-int LTR MaLR 1 1580 0 1625 129 16 5 chr2 156266600 156266910 -96989673 + THE1C LTR MaLR 1 368 -7 22 0 0 0 chr2 156267015 156267037 -96989546 + AT_rich Low_complexity Low_complexity 1 22 0 230 265 0 103 chr2 156267417 156267485 -96989098 + L2 LINE L2 3136 3196 -76 2633 123 68 90 chr2 156267737 156267895 -96988688 - MER4B LTR ERV1 -36 574 414 2042 140 0 13 chr2 156267895 156268202 -96988381 + AluSx SINE Alu 1 303 -9 2633 123 68 90 chr2 156268202 156268630 -96987953 - MER4B LTR ERV1 -196 414 1 22 56 0 0 chr2 156269680 156269716 -96986867 + AT_rich Low_complexity Low_complexity 1 36 0 807 169 0 0 chr2 156270071 156270207 -96986376 + FLAM_C SINE Alu 7 142 -1 321 26 0 0 chr2 156270447 156270485 -96986098 + (CA)n Simple_repeat Simple_repeat 2 39 0 442 134 45 15 chr2 156270535 156270669 -96985914 + (TA)n Simple_repeat Simple_repeat 1 138 0 22 56 0 0 chr2 156272427 156272463 -96984120 + AT_rich Low_complexity Low_complexity 1 36 0 200 167 21 0 chr2 156272543 156272591 -96983992 + (TATG)n Simple_repeat Simple_repeat 2 50 0 2269 99 6 13 chr2 156272802 156273115 -96983468 - AluY SINE Alu 0 311 1 237 208 21 0 chr2 156273260 156273308 -96983275 - L2 LINE L2 -1 3312 3264 2112 97 4 0 chr2 156276134 156276413 -96980170 - AluSg SINE Alu -30 280 1 23 0 0 0 chr2 156276586 156276609 -96979974 + AT_rich Low_complexity Low_complexity 1 23 0 362 252 57 65 chr2 156276617 156276718 -96979865 - MIR SINE MIR -13 249 147 2259 81 3 0 chr2 156276718 156277040 -96979543 - AluY SINE Alu 0 323 1 362 252 57 65 chr2 156277040 156277060 -96979523 - MIR SINE MIR -115 147 128 371 223 0 10 chr2 156277151 156277254 -96979329 + (TATATG)n Simple_repeat Simple_repeat 5 106 0 2137 157 33 14 chr2 156278973 156279393 -96977190 - L1MA4 LINE L1 -9 6291 5864 328 173 0 0 chr2 156279393 156279445 -96977138 + L1MA4 LINE L1 5826 5877 -420 2212 148 56 15 chr2 156279536 156279947 -96976636 - MSTA LTR MaLR 0 428 1 591 221 35 0 chr2 156280247 156280360 -96976223 + FLAM_C SINE Alu 3 119 -24 2252 102 0 0 chr2 156280369 156280662 -96975921 - AluY SINE Alu -15 296 4 286 284 39 10 chr2 156281661 156281763 -96974820 + MIR3 SINE MIR 104 208 0 2035 71 45 4 chr2 156282234 156282532 -96974051 - AluY SINE Alu 0 309 1 426 194 126 0 chr2 156282725 156282828 -96973755 - FLAM_A SINE Alu -5 137 22 240 297 143 0 chr2 156282964 156283055 -96973528 + HAL1 LINE L1 1 104 -2403 447 264 26 57 chr2 156283055 156283248 -96973335 - MER63A DNA MER1_type 0 210 24 271 294 12 0 chr2 156283303 156283388 -96973195 + HAL1 LINE L1 123 208 -2299 4055 141 90 101 chr2 156283530 156285067 -96971516 - pTR5 LTR ERV1 0 2438 743 554 278 147 30 chr2 156285067 156285366 -96971217 + HAL1 LINE L1 322 655 -1852 2124 121 3 0 chr2 156285370 156285676 -96970907 + AluSc SINE Alu 1 307 -2 1369 245 170 55 chr2 156285700 156286410 -96970173 + HAL1 LINE L1 826 1453 -1054 2248 93 0 3 chr2 156286410 156286739 -96969844 + AluSc SINE Alu 1 328 0 1369 245 170 55 chr2 156286739 156287198 -96969385 + HAL1 LINE L1 1453 2131 -376 2152 93 10 3 chr2 156288514 156288805 -96967778 + AluSx SINE Alu 1 293 -19 1234 200 0 4 chr2 156288831 156289071 -96967512 - AluJo SINE Alu -9 303 65 2418 76 0 0 chr2 156289751 156290053 -96966530 - AluY SINE Alu -9 302 1 26 0 0 0 chr2 156290272 156290298 -96966285 + AT_rich Low_complexity Low_complexity 1 26 0 213 306 112 31 chr2 156291101 156291199 -96965384 + L2 LINE L2 415 520 -2794 25 51 0 0 chr2 156291905 156291944 -96964639 + AT_rich Low_complexity Low_complexity 1 39 0 2295 103 0 0 chr2 156292844 156293145 -96963438 + AluSg SINE Alu 1 301 -9 403 259 122 61 chr2 156293147 156293344 -96963239 + MIR SINE MIR 25 233 -29 2022 147 162 3 chr2 156294387 156294822 -96961761 - MER61D LTR ERV1 0 501 2 198 264 38 19 chr2 156295143 156295196 -96961387 + MER5A DNA MER1_type 33 86 -103 2129 106 0 0 chr2 156295382 156295655 -96960928 - AluSc SINE Alu -10 299 27 445 228 0 40 chr2 156296158 156296259 -96960324 - MIR SINE MIR -158 104 8 505 282 65 6 chr2 156296410 156296580 -96960003 + MIR SINE MIR 83 262 0 295 42 62 0 chr2 156296826 156296874 -96959709 + (TAGA)n Simple_repeat Simple_repeat 2 52 0 2643 55 0 0 chr2 156297092 156297403 -96959180 + AluY SINE Alu 1 311 0 279 335 59 51 chr2 156299710 156299964 -96956619 - MIR SINE MIR -5 257 2 352 234 96 36 chr2 156300186 156300353 -96956230 - MER117 DNA MER1_type -15 182 6 2186 119 0 0 chr2 156300629 156300923 -96955660 + AluSq SINE Alu 1 294 -19 261 57 0 0 chr2 156301097 156301132 -96955451 + (A)n Simple_repeat Simple_repeat 1 35 0 2489 40 7 10 chr2 156301430 156301732 -96954851 + AluY SINE Alu 1 301 -10 2289 112 0 6 chr2 156303488 156303801 -96952782 + AluY SINE Alu 1 311 0 21 0 0 0 chr2 156303883 156303904 -96952679 + AT_rich Low_complexity Low_complexity 1 21 0 812 208 68 8 chr2 156303966 156304202 -96952381 + MER63 DNA MER1_type 806 1055 -6 603 299 103 18 chr2 156304231 156304455 -96952128 + MIR SINE MIR 6 248 -14 283 290 91 65 chr2 156305294 156305480 -96951103 - MIR3 SINE MIR -1 207 17 532 292 91 9 chr2 156305645 156305864 -96950719 + MIR SINE MIR 16 252 -10 2225 89 13 35 chr2 156306023 156306339 -96950244 - AluY SINE Alu -2 309 1 385 358 5 26 chr2 156306795 156306988 -96949595 - MER5A DNA MER1_type 0 189 1 256 376 21 0 chr2 156307502 156307595 -96948988 + MIR SINE MIR 30 124 -84 649 227 14 77 chr2 156307646 156307812 -96948771 - MIR SINE MIR -21 241 91 1711 195 28 54 chr2 156307812 156308237 -96948346 + MLT2D LTR ERVL 1 414 0 649 227 14 77 chr2 156308237 156308290 -96948293 - MIR SINE MIR -171 91 36 239 95 54 27 chr2 156308999 156309073 -96947510 + T-rich Low_complexity Low_complexity 3 78 0 2315 84 3 7 chr2 156309132 156309428 -96947155 + AluSc SINE Alu 1 295 -14 22 35 0 0 chr2 156312257 156312286 -96944297 + AT_rich Low_complexity Low_complexity 1 29 0 345 100 0 0 chr2 156312493 156312543 -96944040 + (TG)n Simple_repeat Simple_repeat 2 51 0 678 238 33 6 chr2 156313065 156313246 -96943337 + MER3 DNA MER1_type 1 186 -23 2186 112 33 0 chr2 156313613 156313916 -96942667 + AluSp SINE Alu 1 313 0 2047 135 41 36 chr2 156314023 156314385 -96942198 - THE1B LTR MaLR 0 364 1 274 373 80 26 chr2 156314567 156314953 -96941630 - L2 LINE L2 -476 2838 2432 335 279 107 0 chr2 156315760 156315882 -96940701 + MIR SINE MIR 67 201 -61 301 299 60 26 chr2 156316741 156316858 -96939725 - L2 LINE L2 -11 3302 3182 2256 87 0 0 chr2 156316892 156317205 -96939378 - AluSc SINE Alu 0 318 6 889 252 8 48 chr2 156317307 156317557 -96939026 - MIR SINE MIR -10 252 13 2330 75 10 0 chr2 156318881 156319174 -96937409 + AluY SINE Alu 7 302 -9 2108 148 48 18 chr2 156319393 156319792 -96936791 - MSTA LTR MaLR -17 411 1 472 119 0 12 chr2 156319792 156319876 -96936707 - MSTA-int LTR MaLR 0 1651 1569 860 143 25 6 chr2 156319876 156320037 -96936546 - MSTA LTR MaLR -264 164 1 6894 163 88 36 chr2 156320037 156321523 -96935060 - MSTA-int LTR MaLR 0 1580 18 1885 137 109 45 chr2 156321539 156321941 -96934642 - MSTA LTR MaLR 0 428 1 2563 53 0 0 chr2 156321956 156322256 -96934327 - AluY SINE Alu -11 300 1 200 276 5 38 chr2 156322633 156322818 -96933765 + (TAAA)n Simple_repeat Simple_repeat 1 179 0 1114 257 170 9 chr2 156323028 156323452 -96933131 + MLT1D LTR MaLR 12 503 -2 333 333 0 9 chr2 156323587 156323701 -96932882 - L2 LINE L2 -324 2948 2836 5834 92 11 0 chr2 156324828 156325687 -96930896 + L1PA14 LINE L1 5292 6159 -2 2300 80 3 38 chr2 156325755 156326068 -96930515 - AluY SINE Alu -9 302 1 452 311 141 29 chr2 156326629 156327005 -96929578 - L2 LINE L2 -220 3052 2622 1952 124 73 20 chr2 156327033 156327389 -96929194 + THE1C LTR MaLR 1 375 0 886 207 128 20 chr2 156328481 156328785 -96927798 + MER46C DNA MER2_type 1 337 -1 268 169 17 51 chr2 156329078 156329137 -96927446 - L2 LINE L2 0 3313 3257 * 310 263 40 30 chr2 156329136 156329235 -96927348 + MIR SINE MIR 16 115 -93 23 33 0 0 chr2 156329245 156329275 -96927308 + AT_rich Low_complexity Low_complexity 1 30 0 728 268 30 30 chr2 156330415 156330684 -96925899 + MLT1H LTR MaLR 52 320 -229 244 355 97 0 chr2 156330846 156330970 -96925613 + MIR3 SINE MIR 43 178 -30 1945 126 0 58 chr2 156331062 156331387 -96925196 + AluSg SINE Alu 1 306 -4 496 237 82 22 chr2 156333197 156333355 -96923228 - MIR3 SINE MIR -13 195 20 226 279 49 0 chr2 156333337 156333398 -96923185 + MIR3 SINE MIR 111 174 -34 * 932 279 81 39 chr2 156333872 156334010 -96922573 + MLT1J LTR MaLR 25 156 -355 1119 167 0 60 chr2 156334010 156334243 -96922340 - MER20 DNA MER1_type 0 219 1 932 279 81 39 chr2 156334243 156334538 -96922045 + MLT1J LTR MaLR 156 476 -35 777 211 17 28 chr2 156334733 156334913 -96921670 + MER5B DNA MER1_type 1 178 0 306 0 0 0 chr2 156335202 156335236 -96921347 + (CA)n Simple_repeat Simple_repeat 2 35 0 284 87 22 0 chr2 156335415 156335461 -96921122 + MADE1 DNA Mariner 1 47 -33 364 333 72 13 chr2 156336075 156336228 -96920355 + L3b LINE CR1 1268 1429 -154 292 240 115 48 chr2 156336526 156336630 -96919953 - MIR SINE MIR -111 151 41 1564 170 131 21 chr2 156337231 156337551 -96919032 + MSTB1 LTR MaLR 1 373 -59 198 0 0 0 chr2 156337551 156337573 -96919010 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1564 170 131 21 chr2 156337573 156337641 -96918942 + MSTB1 LTR MaLR 373 432 0 214 167 0 0 chr2 156338969 156339005 -96917578 + CT-rich Low_complexity Low_complexity 4 39 0 565 78 0 0 chr2 156339400 156339477 -96917106 + Alu SINE Alu 1 77 -233 1596 85 5 5 chr2 156339577 156339788 -96916795 - AluY SINE Alu -100 211 1 1072 285 79 29 chr2 156340057 156340548 -96916035 + LTR33 LTR ERVL 4 519 -2 2312 74 30 10 chr2 156340875 156341173 -96915410 + AluSc SINE Alu 1 304 -5 420 263 16 28 chr2 156341853 156342003 -96914580 - MIR SINE MIR -62 146 39 2182 227 34 33 chr2 156342453 156343035 -96913548 + MER119 DNA MER1_type 1 583 0 648 286 117 0 chr2 156343038 156343244 -96913339 + MIR SINE MIR 12 241 -21 361 264 93 51 chr2 156343940 156344001 -96912582 + L1ME4a LINE L1 5769 5826 -295 2328 80 3 7 chr2 156344001 156344303 -96912280 - AluY SINE Alu -6 305 5 361 264 93 51 chr2 156344303 156344457 -96912126 + L1ME4a LINE L1 5826 5993 -128 489 315 127 45 chr2 156345696 156346653 -96909930 + L1MC4a LINE L1 4336 5379 -767 361 317 32 0 chr2 156346822 156346945 -96909638 + L1MC4a LINE L1 5816 5942 -1866 205 274 0 16 chr2 156346945 156346953 -96909630 + (CATATA)n Simple_repeat Simple_repeat 1 8 -53 1707 135 30 85 chr2 156346953 156347037 -96909546 + MER7A DNA MER2_type 5 92 -2946 1735 124 0 22 chr2 156347037 156347330 -96909253 + AluSx SINE Alu 23 309 0 1707 135 30 85 chr2 156347330 156347608 -96908975 + MER7A DNA MER2_type 92 346 0 205 274 0 16 chr2 156347608 156347661 -96908922 + (CATATA)n Simple_repeat Simple_repeat 8 61 0 515 309 60 32 chr2 156348303 156348552 -96908031 - MIR SINE MIR -4 258 3 184 288 15 61 chr2 156348965 156349031 -96907552 - MIR SINE MIR -168 94 32 2172 123 3 3 chr2 156350992 156351302 -96905281 + AluSx SINE Alu 1 310 -2 259 299 0 5 chr2 156351994 156352100 -96904483 + MIR SINE MIR 40 144 -64 250 339 231 5 chr2 156353965 156354151 -96902432 - MIR SINE MIR -33 229 2 292 305 78 21 chr2 156356545 156356686 -96899897 + LTR33 LTR ERVL 44 192 -329 682 245 70 12 chr2 156356719 156356960 -96899623 + MER46C DNA MER2_type 80 334 -4 266 259 0 0 chr2 156358214 156358268 -96898315 + L2 LINE L2 3213 3266 -6 394 339 64 35 chr2 156359135 156359306 -96897277 + MER5B DNA MER1_type 1 176 -2 183 42 0 0 chr2 156360596 156360620 -96895963 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 228 264 75 57 chr2 156361028 156361134 -96895449 + L2 LINE L2 3163 3270 -2 21 0 0 0 chr2 156361208 156361229 -96895354 + AT_rich Low_complexity Low_complexity 1 21 0 221 365 22 29 chr2 156361992 156362129 -96894454 - MIR SINE MIR -79 183 48 236 300 100 17 chr2 156362169 156362289 -96894294 + MIR SINE MIR 62 191 -71 546 306 62 19 chr2 156362406 156362713 -96893870 + MER46C DNA MER2_type 1 320 -18 463 338 43 5 chr2 156363019 156363226 -96893357 + MIR SINE MIR 48 262 0 302 332 142 29 chr2 156363996 156364161 -96892422 + L1M4 LINE L1 4881 5026 -1120 2233 168 44 5 chr2 156364161 156364571 -96892012 + MSTB LTR MaLR 1 426 0 302 332 142 29 chr2 156364571 156364679 -96891904 + L1M4 LINE L1 5026 5185 -961 229 185 31 0 chr2 156364750 156364815 -96891768 + (TATG)n Simple_repeat Simple_repeat 2 68 0 2184 115 10 0 chr2 156364973 156365269 -96891314 + AluSx SINE Alu 1 299 -13 321 47 0 0 chr2 156365989 156366032 -96890551 + (CA)n Simple_repeat Simple_repeat 2 44 0 891 194 4 97 chr2 156366527 156366774 -96889809 + MER58A DNA MER1_type 1 224 0 184 309 82 31 chr2 156367589 156367686 -96888897 + MIR3 SINE MIR 82 183 -25 1323 245 50 16 chr2 156367820 156368147 -96888436 + MSTD LTR MaLR 1 344 -52 211 26 0 53 chr2 156368147 156368185 -96888398 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 1323 245 50 16 chr2 156368185 156368240 -96888343 + MSTD LTR MaLR 344 396 0 414 219 204 22 chr2 156370084 156370221 -96886362 - MER45 DNA AcHobo -1 1580 1419 909 257 48 16 chr2 156370295 156370613 -96885970 - MER45C DNA AcHobo -577 376 1 451 307 45 6 chr2 156370672 156370848 -96885735 + MLT1L LTR MaLR 431 613 -2 1321 236 129 5 chr2 156371842 156372253 -96884330 + MLT1C LTR MaLR 6 467 0 35 24 0 0 chr2 156373149 156373191 -96883392 + AT_rich Low_complexity Low_complexity 1 42 0 2410 77 0 3 chr2 156374492 156374803 -96881780 + AluY SINE Alu 1 310 -1 186 270 48 32 chr2 156375052 156375115 -96881468 - L3b LINE CR1 0 1583 1520 22 35 0 0 chr2 156376084 156376113 -96880470 + AT_rich Low_complexity Low_complexity 1 29 0 216 381 21 10 chr2 156376271 156376368 -96880215 - L2 LINE L2 -1 3312 3215 572 294 91 0 chr2 156376606 156376803 -96879780 + MIR SINE MIR 22 236 -26 21 0 0 0 chr2 156376987 156377008 -96879575 + AT_rich Low_complexity Low_complexity 1 21 0 261 328 0 0 chr2 156377087 156377145 -96879438 + L3b LINE CR1 1519 1576 -7 2493 64 0 0 chr2 156378297 156378594 -96877989 - AluY SINE Alu -10 301 5 298 320 123 0 chr2 156378640 156378762 -96877821 + L2 LINE L2 2560 2696 -618 352 309 48 8 chr2 156378934 156379060 -96877523 + L2 LINE L2 3174 3304 -9 21 0 0 0 chr2 156379149 156379170 -96877413 + AT_rich Low_complexity Low_complexity 1 21 0 2092 101 11 0 chr2 156379174 156379451 -96877132 - AluSc SINE Alu -29 280 1 25 0 0 0 chr2 156379491 156379516 -96877067 + AT_rich Low_complexity Low_complexity 1 25 0 525 330 101 28 chr2 156381707 156382182 -96874401 - L2 LINE L2 -211 3061 2539 401 286 91 25 chr2 156382402 156382767 -96873816 - L1MC4a LINE L1 -153 5968 5606 480 311 48 29 chr2 156382791 156383191 -96873392 - L1MC4a LINE L1 -615 5555 5134 227 225 46 93 chr2 156384251 156384402 -96872181 + MER103 DNA DNA 11 154 -12 234 214 43 14 chr2 156388887 156388957 -96867626 + CT-rich Low_complexity Low_complexity 1 72 0 371 306 136 5 chr2 156389423 156389622 -96866961 - MIR SINE MIR -24 238 14 822 216 54 77 chr2 156389988 156390186 -96866397 + MLT1A2 LTR MaLR 1 202 -265 360 0 0 0 chr2 156390186 156390226 -96866357 + (CA)n Simple_repeat Simple_repeat 1 40 0 822 216 54 77 chr2 156390226 156390508 -96866075 + MLT1A2 LTR MaLR 202 467 0 405 318 60 7 chr2 156390537 156390688 -96865895 - MIR SINE MIR -94 168 10 2148 108 4 0 chr2 156390809 156391117 -96865466 + AluSg SINE Alu 1 309 0 282 257 237 4 chr2 156391548 156391793 -96864790 - MER20B DNA MER1_type -108 675 374 227 31 31 0 chr2 156391798 156391830 -96864753 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 2208 121 0 0 chr2 156391928 156392235 -96864348 - AluY SINE Alu -2 309 3 1471 187 109 0 chr2 156392240 156392507 -96864076 - AluSx SINE Alu -16 296 1 719 294 45 8 chr2 156392913 156393178 -96863405 - MER20B DNA MER1_type -423 360 86 366 100 50 90 chr2 156393571 156393671 -96862912 - MER53 DNA DNA -10 179 84 363 161 62 0 chr2 156393692 156393773 -96862810 + MER53 DNA DNA 101 186 -3 2575 58 0 0 chr2 156393883 156394194 -96862389 - AluY SINE Alu 0 311 1 483 211 39 16 chr2 156394555 156394683 -96861900 + L1ME1 LINE L1 6033 6163 -3 25 0 0 0 chr2 156394683 156394708 -96861875 + AT_rich Low_complexity Low_complexity 1 25 0 1942 158 39 30 chr2 156395154 156395516 -96861067 + MLT1A1 LTR MaLR 1 365 0 255 186 43 14 chr2 156396106 156396176 -96860407 + (TA)n Simple_repeat Simple_repeat 1 72 0 22 0 0 0 chr2 156396309 156396331 -96860252 + AT_rich Low_complexity Low_complexity 1 22 0 222 296 68 23 chr2 156397872 156397960 -96858623 + L2 LINE L2 2953 3044 -269 2215 200 14 0 chr2 156398050 156398470 -96858113 + MSTB LTR MaLR 1 426 0 230 86 29 0 chr2 156398731 156398766 -96857817 - MSTB1 LTR MaLR 0 432 397 2049 143 0 0 chr2 156398900 156399200 -96857383 + AluSx SINE Alu 13 312 0 3357 227 131 17 chr2 156399203 156400018 -96856565 - MST-int LTR MaLR -65 1586 679 615 245 0 31 chr2 156400096 156400255 -96856328 - MIR SINE MIR 0 262 109 2509 160 16 2 chr2 156400298 156400722 -96855861 + MSTB1 LTR MaLR 3 432 0 3404 197 25 13 chr2 156400722 156401396 -96855187 + MSTB1-int LTR MaLR 1 682 -969 7268 95 10 23 chr2 156401462 156402533 -96854050 - MER11C LTR ERVK -14 1057 1 26 50 0 0 chr2 156405221 156405261 -96851322 + AT_rich Low_complexity Low_complexity 1 40 0 2259 127 0 6 chr2 156405387 156405701 -96850882 + AluSx SINE Alu 1 312 0 206 250 131 24 chr2 156406033 156406117 -96850466 - MER91C DNA MER1_type -12 128 36 466 275 47 35 chr2 156406140 156406398 -96850185 + L1MC4a LINE L1 5664 5924 -1884 28 61 0 0 chr2 156406601 156406650 -96849933 + AT_rich Low_complexity Low_complexity 1 49 0 1091 177 0 15 chr2 156406715 156406918 -96849665 + L1PB1 LINE L1 1367 1566 -5297 * 12179 176 73 22 chr2 156406902 156409246 -96847337 + L1PB1 LINE L1 2463 5171 -1696 387 0 0 0 chr2 156409246 156409289 -96847294 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 12179 176 73 22 chr2 156409289 156411070 -96845513 + L1PB1 LINE L1 5171 6859 -8 1777 191 74 0 chr2 156411074 156411478 -96845105 - L1M2 LINE L1 -4005 2844 2411 1581 260 67 26 chr2 156411890 156412747 -96843836 + L1ME3 LINE L1 5255 6162 0 430 284 88 14 chr2 156413105 156413253 -96843330 - MIR SINE MIR -12 250 92 1007 232 5 10 chr2 156413257 156413464 -96843119 + AluJo SINE Alu 1 206 -106 180 0 0 0 chr2 156413502 156413522 -96843061 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 2083 156 11 8 chr2 156414135 156414495 -96842088 + MER46B DNA MER2_type 1 236 0 354 295 104 17 chr2 156414624 156414797 -96841786 - MLT1L LTR MaLR -276 339 152 2040 159 28 28 chr2 156415469 156415859 -96840724 + MLT1B LTR MaLR 1 390 0 243 317 85 24 chr2 156416206 156416370 -96840213 - L2 LINE L2 0 3313 3140 225 0 0 0 chr2 156416397 156416422 -96840161 + (T)n Simple_repeat Simple_repeat 1 25 0 347 375 7 7 chr2 156416968 156417120 -96839463 - MER5B DNA MER1_type -15 163 12 1894 131 11 7 chr2 156417635 156417910 -96838673 + AluJb SINE Alu 21 296 -16 246 173 58 0 chr2 156418042 156418094 -96838489 + MLT1D LTR MaLR 31 85 -420 1018 229 140 50 chr2 156418145 156418503 -96838080 + MLT1D LTR MaLR 95 484 -21 5183 221 27 71 chr2 156418503 156419782 -96836801 + MLT1D-int LTR MaLR 2 1212 -159 1888 195 25 8 chr2 156419782 156420141 -96836442 - MLT1A1 LTR MaLR 0 365 1 5183 221 27 71 chr2 156420141 156420289 -96836294 + MLT1D-int LTR MaLR 1212 1365 -6 922 211 102 86 chr2 156420313 156420712 -96835871 + MLT1D LTR MaLR 76 467 0 21 36 0 0 chr2 156420721 156420749 -96835834 + AT_rich Low_complexity Low_complexity 1 28 0 3537 137 45 3 chr2 156420827 156421405 -96835178 - LTR26 LTR ERV1 -1 602 1 294 303 87 13 chr2 156421611 156421763 -96834820 + MIR3 SINE MIR 19 184 -50 22 56 0 0 chr2 156421939 156421975 -96834608 + AT_rich Low_complexity Low_complexity 1 36 0 691 189 69 19 chr2 156422881 156423040 -96833543 - MLT1B LTR MaLR -216 174 8 2010 143 3 0 chr2 156423274 156423560 -96833023 - AluSx SINE Alu -25 287 1 1473 123 45 0 chr2 156423638 156423858 -96832725 - MER30 DNA MER1_type 0 230 1 288 289 24 0 chr2 156423870 156423953 -96832630 + L2 LINE L2 3227 3311 -2 214 128 0 51 chr2 156425647 156425686 -96830897 + (GAAA)n Simple_repeat Simple_repeat 4 40 0 236 274 0 0 chr2 156426320 156426382 -96830201 + L1ME LINE L1 5398 5459 -2349 506 294 129 10 chr2 156426403 156426712 -96829871 + L1ME LINE L1 5394 5739 -382 180 0 0 0 chr2 156427207 156427227 -96829356 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 560 329 111 10 chr2 156427614 156427921 -96828662 - MER102b DNA MER1_type -3 338 1 304 282 47 0 chr2 156428367 156428452 -96828131 + L1ME LINE L1 5730 5818 -303 526 192 16 6 chr2 156428498 156428635 -96827948 + MER93a LTR ERV1 1 138 -235 547 291 57 17 chr2 156428639 156428814 -96827769 - MIR SINE MIR -57 205 24 444 191 191 88 chr2 156430957 156431151 -96825432 - MER58C DNA MER1_type -1 214 1 250 189 66 9 chr2 156431271 156431377 -96825206 + (TCTA)n Simple_repeat Simple_repeat 3 114 0 1182 192 49 116 chr2 156432085 156432491 -96824092 + MLT1B LTR MaLR 1 379 -11 541 114 27 60 chr2 156432856 156433040 -96823543 + CT-rich Low_complexity Low_complexity 3 180 0 285 296 72 8 chr2 156433170 156433295 -96823288 + LTR16C LTR ERVL 126 258 -233 342 291 89 59 chr2 156433330 156433680 -96822903 - LTR16A1 LTR ERVL -12 475 106 261 0 0 0 chr2 156433830 156433859 -96822724 + (CA)n Simple_repeat Simple_repeat 2 30 0 607 321 50 4 chr2 156434283 156434523 -96822060 + MIR SINE MIR 12 262 0 271 284 268 5 chr2 156434520 156434710 -96821873 + MIR SINE MIR 17 256 -6 * 257 270 135 0 chr2 156434892 156434981 -96821602 - L3 LINE CR1 -180 1397 1297 1605 143 3 144 chr2 156435541 156435616 -96820967 + L1MB1 LINE L1 5719 5803 -365 1933 146 7 3 chr2 156435616 156435904 -96820679 + AluSx SINE Alu 1 289 -23 1605 143 3 144 chr2 156435904 156436335 -96820248 + L1MB1 LINE L1 5803 6063 -105 671 186 0 11 chr2 156436417 156436594 -96819989 + GA-rich Low_complexity Low_complexity 4 178 0 254 95 24 0 chr2 156436935 156436977 -96819606 + (CA)n Simple_repeat Simple_repeat 2 44 0 237 344 100 44 chr2 156437207 156437367 -96819216 - MIR3 SINE MIR -10 198 30 847 190 22 11 chr2 156437524 156437708 -96818875 - MER4C LTR ERV1 0 465 280 502 118 39 118 chr2 156437743 156437870 -96818713 - MER4C LTR ERV1 -347 118 2 32 0 0 0 chr2 156438444 156438476 -96818107 + AT_rich Low_complexity Low_complexity 1 32 0 736 267 52 69 chr2 156438829 156439060 -96817523 - MLT1L LTR MaLR -8 607 276 2139 73 0 11 chr2 156442872 156443144 -96813439 + AluY SINE Alu 36 304 -7 1572 167 44 7 chr2 156443984 156444259 -96812324 - AluJb SINE Alu -27 285 1 2150 109 7 3 chr2 156444766 156445059 -96811524 - AluSc SINE Alu -15 294 1 492 364 33 11 chr2 156446285 156446560 -96810023 + L3 LINE CR1 707 987 -590 496 335 26 0 chr2 156446578 156446758 -96809825 - MIR SINE MIR -11 251 67 394 205 37 87 chr2 156446774 156446935 -96809648 - MIR SINE MIR 0 262 110 622 212 89 14 chr2 156446954 156447100 -96809483 + MLT2F LTR ERVL 507 663 0 210 330 21 0 chr2 156448015 156448112 -96808471 + CT-rich Low_complexity Low_complexity 3 101 0 1368 207 48 27 chr2 156448528 156448862 -96807721 + MER58B DNA MER1_type 1 341 0 2594 181 43 21 chr2 156451087 156451619 -96804964 - MER74A LTR ERVL -14 544 1 355 381 17 0 chr2 156453907 156454025 -96802558 - L2 LINE L2 -19 3253 3134 212 146 0 42 chr2 156454546 156454594 -96801989 + (TATATG)n Simple_repeat Simple_repeat 6 51 0 512 260 232 17 chr2 156454600 156454777 -96801806 + MIR SINE MIR 4 218 -44 201 293 47 66 chr2 156455008 156455114 -96801469 + MIR3 SINE MIR 89 192 -16 2311 93 3 0 chr2 156456452 156456743 -96799840 - AluSq SINE Alu -21 292 1 188 270 40 90 chr2 156458335 156458435 -96798148 + MIR SINE MIR 42 136 -126 2051 136 0 7 chr2 156459294 156459595 -96796988 + AluSx SINE Alu 1 299 -13 1782 136 25 25 chr2 156460582 156460868 -96795715 + AluSx SINE Alu 2 287 -25 360 310 23 41 chr2 156460876 156461047 -96795536 - MER5A DNA MER1_type -15 174 7 206 250 121 69 chr2 156461045 156461161 -96795422 + L2 LINE L2 2208 2329 -985 * 297 345 23 11 chr2 156461844 156461931 -96794652 - L2 LINE L2 0 3272 3185 275 255 101 47 chr2 156462138 156462287 -96794296 - MLT1J LTR MaLR -23 488 332 318 305 23 38 chr2 156462352 156462483 -96794100 - MLT1J2 LTR MaLR -305 145 17 2196 101 0 7 chr2 156463065 156463394 -96793189 - AluSq SINE Alu 0 313 1 1516 192 3 31 chr2 156463686 156463972 -96792611 + AluJo SINE Alu 1 278 -34 375 78 0 0 chr2 156463977 156464028 -96792555 + (GGAA)n Simple_repeat Simple_repeat 4 54 0 403 347 65 17 chr2 156464386 156464738 -96791845 - L1MC4a LINE L1 -1945 5863 5495 241 363 80 9 chr2 156464820 156464933 -96791650 - MIR3 SINE MIR -75 133 13 1957 173 44 22 chr2 156464997 156465362 -96791221 - MSTB LTR MaLR -53 373 1 1982 132 0 29 chr2 156465763 156465932 -96790651 - AluSx SINE Alu -11 301 144 2355 100 3 0 chr2 156465932 156466242 -96790341 - AluSp SINE Alu -2 311 1 1982 132 0 29 chr2 156466242 156466382 -96790201 - AluSx SINE Alu -168 144 1 4295 50 28 0 chr2 156467617 156468162 -96788421 - L1PA7 LINE L1 0 6154 5595 225 0 0 0 chr2 156468194 156468219 -96788364 + (CA)n Simple_repeat Simple_repeat 2 26 0 931 153 0 137 chr2 156468446 156468695 -96787888 + MER20 DNA MER1_type 4 218 -1 2176 131 0 3 chr2 156469182 156469479 -96787104 - AluSx SINE Alu -16 296 1 724 228 101 0 chr2 156469919 156470077 -96786506 - MER45A DNA AcHobo -3 175 2 360 270 26 118 chr2 156470149 156470238 -96786345 - MER91C DNA MER1_type -1 139 68 2230 107 3 3 chr2 156470238 156470548 -96786035 - AluSx SINE Alu -1 311 2 360 270 26 118 chr2 156470548 156470610 -96785973 - MER91C DNA MER1_type -72 68 2 270 327 87 27 chr2 156471027 156471177 -96785406 - MIR3 SINE MIR -6 202 44 250 289 0 12 chr2 156472580 156472663 -96783920 + MLT1F LTR MaLR 453 534 -8 29 0 0 0 chr2 156473480 156473509 -96783074 + AT_rich Low_complexity Low_complexity 1 29 0 23 54 0 0 chr2 156473897 156473934 -96782649 + AT_rich Low_complexity Low_complexity 1 37 0 1200 210 130 38 chr2 156474071 156474470 -96782113 - L1MD3 LINE L1 -7 8035 7611 295 244 22 0 chr2 156475025 156475115 -96781468 + L1ME1 LINE L1 17 108 -6315 3326 222 33 70 chr2 156475939 156476453 -96780130 + L1ME1 LINE L1 4924 5456 -1505 1760 162 65 0 chr2 156476453 156476743 -96779840 + AluJo SINE Alu 1 309 -3 3326 222 33 70 chr2 156476743 156477756 -96778827 + L1ME1 LINE L1 5456 6396 -565 936 237 110 22 chr2 156477783 156478146 -96778437 - LTR52 LTR ERVL -14 407 13 1943 140 0 14 chr2 156478146 156478438 -96778145 + AluSx SINE Alu 3 290 -22 1609 237 127 10 chr2 156478453 156478951 -96777632 + L1ME1 LINE L1 6401 6956 -5 195 390 25 38 chr2 156478985 156479144 -96777439 - MIR SINE MIR -103 159 3 316 297 99 0 chr2 156480851 156480962 -96775621 - MIR SINE MIR -53 209 88 306 255 75 11 chr2 156480989 156481083 -96775500 - MLT1J2 LTR MaLR -33 417 318 270 302 123 0 chr2 156481252 156481358 -96775225 - MLT1J2 LTR MaLR -289 161 43 224 224 15 0 chr2 156481539 156481606 -96774977 + GA-rich Low_complexity Low_complexity 3 70 0 7197 205 27 15 chr2 156483192 156486129 -96770454 + L1MC1 LINE L1 3355 6333 0 2405 80 13 0 chr2 156486421 156486721 -96769862 + AluSq SINE Alu 2 305 -8 25 0 0 0 chr2 156486731 156486756 -96769827 + AT_rich Low_complexity Low_complexity 1 25 0 537 16 0 0 chr2 156486798 156486860 -96769723 + (CA)n Simple_repeat Simple_repeat 2 63 0 2440 255 108 36 chr2 156487074 156488548 -96768035 - L1MEc LINE L1 -2433 4508 2928 507 282 120 37 chr2 156488606 156488617 -96767966 - L1MEc LINE L1 -4010 2931 2922 2211 100 3 0 chr2 156488617 156488907 -96767676 + AluSc SINE Alu 4 294 -15 507 282 120 37 chr2 156488907 156489271 -96767312 - L1MEc LINE L1 -4019 2922 2525 2025 140 0 0 chr2 156489273 156489566 -96767017 - AluSx SINE Alu -19 293 1 1015 289 93 43 chr2 156489567 156490491 -96766092 - L1MEc LINE L1 -4469 2653 1684 1437 207 79 58 chr2 156490544 156490959 -96765624 - MLT1D LTR MaLR 0 505 99 254 344 16 0 chr2 156491010 156491148 -96765435 - L1MEc LINE L1 -5005 1614 1273 2262 109 0 0 chr2 156492214 156492516 -96764067 - AluSg SINE Alu -8 302 1 403 258 159 28 chr2 156493198 156493380 -96763203 + L1ME3A LINE L1 5960 6165 -5 28 48 0 0 chr2 156493593 156493635 -96762948 + AT_rich Low_complexity Low_complexity 1 42 0 2011 230 103 22 chr2 156493695 156494324 -96762259 + MLT1E2 LTR MaLR 3 626 0 193 371 147 9 chr2 156495094 156495210 -96761373 + MIR SINE MIR 16 147 -115 22 0 0 0 chr2 156495319 156495341 -96761242 + AT_rich Low_complexity Low_complexity 1 22 0 249 269 0 0 chr2 156496559 156496611 -96759972 + Charlie8 DNA MER1_type 2364 2415 -2 23 0 0 0 chr2 156497273 156497296 -96759287 + AT_rich Low_complexity Low_complexity 1 23 0 189 269 15 45 chr2 156497372 156497439 -96759144 + MIR3 SINE MIR 144 208 0 194 299 52 41 chr2 156497486 156497583 -96759000 - MIR SINE MIR -6 256 159 21 104 0 0 chr2 156498314 156498391 -96758192 + AT_rich Low_complexity Low_complexity 1 77 0 2148 112 53 31 chr2 156499016 156499372 -96757211 + THE1B LTR MaLR 1 364 0 270 338 0 0 chr2 156499691 156499759 -96756824 - L2 LINE L2 0 3272 3205 1856 211 73 25 chr2 156500675 156501115 -96755468 - MLT1D LTR MaLR -11 494 34 1274 304 153 30 chr2 156502665 156502953 -96753630 + L2 LINE L2 2172 2423 -890 1936 115 14 7 chr2 156502953 156503249 -96753334 + AluY SINE Alu 1 298 -13 1274 304 153 30 chr2 156503249 156504005 -96752578 + L2 LINE L2 2423 3311 -2 326 305 37 21 chr2 156505136 156505323 -96751260 - MIR SINE MIR -14 248 59 705 265 57 7 chr2 156506309 156506508 -96750075 - MIR SINE MIR -38 224 16 244 308 56 79 chr2 156506558 156506772 -96749811 + L2 LINE L2 2877 3085 -187 1425 184 0 0 chr2 156507147 156507404 -96749179 + AluJo SINE Alu 49 305 0 22 35 0 0 chr2 156508071 156508100 -96748483 + AT_rich Low_complexity Low_complexity 1 29 0 294 244 12 24 chr2 156508365 156508447 -96748136 + GA-rich Low_complexity Low_complexity 2 82 0 200 226 38 0 chr2 156508799 156508852 -96747731 + CT-rich Low_complexity Low_complexity 2 56 0 3503 123 93 2 chr2 156511859 156512450 -96744133 + L1PA16 LINE L1 5521 6165 -1 191 36 36 0 chr2 156512454 156512482 -96744101 + (GAAA)n Simple_repeat Simple_repeat 3 31 0 5844 149 53 10 chr2 156513475 156514623 -96741960 + L1MC1 LINE L1 5130 6333 0 2068 122 48 0 chr2 156515464 156515759 -96740824 + AluSg SINE Alu 1 309 -1 2165 245 109 35 chr2 156516086 156516988 -96739595 + L1MEc LINE L1 1353 2354 -3861 1686 161 80 0 chr2 156516988 156517262 -96739321 - AluJb SINE Alu -9 303 8 2165 245 109 35 chr2 156517262 156517750 -96738833 + L1MEc LINE L1 2354 2804 -3411 240 35 0 0 chr2 156520249 156520278 -96736305 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2246 97 0 0 chr2 156520602 156520900 -96735683 - AluSg SINE Alu -12 298 1 252 281 0 0 chr2 156520992 156521056 -96735527 + (TA)n Simple_repeat Simple_repeat 2 65 0 1664 119 58 0 chr2 156521411 156521706 -96734877 - L1MA9 LINE L1 0 6312 6001 199 211 19 144 chr2 156521933 156522037 -96734546 - L3 LINE CR1 -85 1492 1402 1511 258 154 20 chr2 156523306 156523964 -96732619 + L2 LINE L2 2285 3042 -271 2289 113 0 0 chr2 156524810 156525111 -96731472 - AluSx SINE Alu -11 301 1 26 30 0 0 chr2 156525170 156525203 -96731380 + AT_rich Low_complexity Low_complexity 1 33 0 2030 165 19 135 chr2 156526193 156526727 -96729856 - MER70A LTR ERVL 0 472 1 411 225 303 17 chr2 156527102 156527280 -96729303 + MIR SINE MIR 34 262 0 24 0 0 0 chr2 156527356 156527380 -96729203 + AT_rich Low_complexity Low_complexity 1 24 0 1061 140 4 68 chr2 156528135 156528370 -96728213 + L1MA7 LINE L1 6072 6291 0 384 22 0 0 chr2 156529676 156529721 -96726862 + (TTTTA)n Simple_repeat Simple_repeat 2 46 0 249 108 0 0 chr2 156530432 156530469 -96726114 + (TA)n Simple_repeat Simple_repeat 2 38 0 1039 283 108 23 chr2 156530469 156531508 -96725075 + L1MEc LINE L1 872 2067 -4329 8081 108 2 12 chr2 156531528 156532673 -96723910 + L1PA8A LINE L1 1 1133 -4742 15505 98 2 3 chr2 156532674 156535680 -96720903 + L1PA8A LINE L1 3444 6446 0 1154 176 0 0 chr2 156535986 156536168 -96720415 - FRAM SINE Alu 0 176 1 850 190 32 6 chr2 156536286 156536444 -96720139 + FRAM SINE Alu 2 163 -3 1510 281 89 27 chr2 156537104 156537588 -96718995 + MLT1G1 LTR MaLR 75 588 -7 1762 160 83 24 chr2 156538334 156538708 -96717875 + MSTD LTR MaLR 1 396 0 2129 212 19 74 chr2 156539012 156539593 -96716990 + MLT2B3 LTR ERVL 1 549 -5 260 250 0 74 chr2 156540214 156540296 -96716287 + MER5B DNA MER1_type 2 76 -102 2360 90 3 0 chr2 156540296 156540607 -96715976 - AluSq SINE Alu -1 312 1 260 250 0 74 chr2 156540607 156540632 -96715951 + MER5B DNA MER1_type 76 101 -77 212 280 86 21 chr2 156540794 156540887 -96715696 - MER5B DNA MER1_type -73 105 7 21 0 0 0 chr2 156541028 156541049 -96715534 + AT_rich Low_complexity Low_complexity 1 21 0 2023 88 33 4 chr2 156541095 156541389 -96715194 - AluSg SINE Alu 0 304 3 1329 274 23 39 chr2 156541435 156541876 -96714707 + LTR16B LTR ERVL 1 434 -30 2942 220 30 80 chr2 156542628 156542781 -96713802 + Charlie1 DNA MER1_type 7 166 -2595 2121 215 74 28 chr2 156542781 156543386 -96713197 - LTR27 LTR ERV1 0 636 4 2942 220 30 80 chr2 156543386 156544202 -96712381 + Charlie1 DNA MER1_type 166 927 -1834 187 216 0 0 chr2 156544212 156544263 -96712320 - MER5C DNA MER1_type -67 257 207 831 219 27 6 chr2 156544272 156544455 -96712128 - MER5A DNA MER1_type 0 189 3 265 282 176 30 chr2 156544465 156544596 -96711987 - MER5A DNA MER1_type 0 189 40 241 254 0 0 chr2 156544628 156544683 -96711900 + MER5B DNA MER1_type 124 178 0 2403 109 0 0 chr2 156546338 156546651 -96709932 + AluSq SINE Alu 1 313 0 23 0 0 0 chr2 156546679 156546702 -96709881 + AT_rich Low_complexity Low_complexity 1 23 0 957 247 50 41 chr2 156547021 156547541 -96709042 - MLT1F1 LTR MaLR 0 542 1 365 367 0 7 chr2 156547544 156547683 -96708900 - MIR SINE MIR -113 149 12 710 214 130 21 chr2 156549718 156549910 -96706673 - MIR SINE MIR -3 259 47 1249 143 33 0 chr2 156552583 156552793 -96703790 - MER1B DNA MER1_type 0 339 123 26 0 0 0 chr2 156553004 156553030 -96703553 + AT_rich Low_complexity Low_complexity 1 26 0 344 309 65 0 chr2 156554325 156554448 -96702135 - MIR SINE MIR -13 249 119 632 219 20 7 chr2 156554973 156555119 -96701464 - MER105 DNA DNA -50 154 7 187 252 134 79 chr2 156555919 156556046 -96700537 - MIR SINE MIR -69 193 60 270 0 0 0 chr2 156556361 156556391 -96700192 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 345 385 42 0 chr2 156556450 156556593 -96699990 - L2 LINE L2 -9 3263 3115 276 371 71 0 chr2 156557539 156557679 -96698904 - L2 LINE L2 0 3272 3123 2160 119 0 3 chr2 156557889 156558184 -96698399 + AluSx SINE Alu 1 294 -18 1108 181 0 45 chr2 156558579 156558822 -96697761 + LTR26E LTR ERV1 216 447 -175 26 0 0 0 chr2 156558964 156558990 -96697593 + AT_rich Low_complexity Low_complexity 1 26 0 703 71 61 0 chr2 156559328 156559427 -96697156 + L1PA13 LINE L1 6057 6161 -2 205 176 0 0 chr2 156559467 156559501 -96697082 - L2 LINE L2 -10 3303 3270 370 193 56 62 chr2 156559790 156559951 -96696632 + MER112 DNA MER1_type 2 161 -99 204 67 0 0 chr2 156559951 156559981 -96696602 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 258 327 39 59 chr2 156560074 156560227 -96696356 + MIR SINE MIR 14 163 -99 24 0 0 0 chr2 156561637 156561661 -96694922 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr2 156562451 156562480 -96694103 + AT_rich Low_complexity Low_complexity 1 29 0 3425 134 7 13 chr2 156562669 156563214 -96693369 + L1PA15 LINE L1 5624 6165 0 217 323 43 0 chr2 156563256 156563349 -96693234 - L2 LINE L2 -249 3023 2927 510 261 78 21 chr2 156563543 156563685 -96692898 - MER5B DNA MER1_type -25 153 4 829 224 10 66 chr2 156563799 156563850 -96692733 + MER5A DNA MER1_type 1 53 -136 1721 207 43 6 chr2 156563850 156564202 -96692381 - MLT1A1 LTR MaLR 0 365 1 829 224 10 66 chr2 156564202 156564346 -96692237 + MER5A DNA MER1_type 53 185 -4 385 301 26 64 chr2 156565018 156565176 -96691407 + MIR SINE MIR 3 153 -62 2052 142 3 7 chr2 156565384 156565686 -96690897 + AluSx SINE Alu 1 301 -11 697 259 69 33 chr2 156566103 156566408 -96690175 - MER46C DNA MER2_type -19 319 4 2382 84 3 7 chr2 156566964 156567263 -96689320 + AluSx SINE Alu 1 298 -14 386 281 116 8 chr2 156567397 156567518 -96689065 - L2 LINE L2 0 3272 3139 431 313 39 6 chr2 156567671 156567850 -96688733 - MIR SINE MIR 0 262 78 750 216 158 34 chr2 156567854 156568146 -96688437 + MER46C DNA MER2_type 1 328 -10 308 263 144 8 chr2 156568226 156568344 -96688239 + MER94 DNA DNA 1 134 0 257 272 79 61 chr2 156568665 156568779 -96687804 - L2 LINE L2 -802 2512 2397 3087 81 23 20 chr2 156569048 156569491 -96687092 - MLT2A1 LTR ERVL 0 444 1 41759 78 6 3 chr2 156569491 156575126 -96681457 - HERVL-A1 LTR ERVL 0 5654 1 3036 94 23 7 chr2 156575126 156575563 -96681020 - MLT2A1 LTR ERVL 0 444 1 615 171 57 85 chr2 156575614 156575790 -96680793 + MER34B LTR ERV1 13 183 -382 233 286 0 0 chr2 156575799 156575848 -96680735 - L2 LINE L2 -10 3262 3214 13851 198 62 11 chr2 156576499 156583015 -96673568 - L1PB1 LINE L1 -14 6853 6 1092 212 13 17 chr2 156583390 156583626 -96672957 + AluJo SINE Alu 70 304 -8 4180 78 4 0 chr2 156584762 156585313 -96671270 - MER41A LTR ERV1 -1 553 1 261 163 0 0 chr2 156585676 156585725 -96670858 + CT-rich Low_complexity Low_complexity 3 51 0 2273 131 146 40 chr2 156585730 156586258 -96670325 + MER34C LTR ERV1 1 584 -1 207 161 0 0 chr2 156586259 156586290 -96670293 + polypyrimidine Low_complexity Low_complexity 4 34 0 213 278 19 0 chr2 156586757 156586811 -96669772 + (TG)n Simple_repeat Simple_repeat 2 56 0 1553 187 6 47 chr2 156587049 156587412 -96669171 - MER4D LTR ERV1 -11 892 545 308 162 118 30 chr2 156587410 156587516 -96669067 - MER4E LTR ERV1 -588 284 62 * 1368 189 57 7 chr2 156587502 156587782 -96668801 - MER49 LTR ERV1 -629 294 1 198 91 0 0 chr2 156588387 156588420 -96668163 + (CA)n Simple_repeat Simple_repeat 2 34 0 264 280 167 23 chr2 156588499 156588631 -96667952 - MIR SINE MIR -55 207 57 3071 183 107 15 chr2 156588647 156589339 -96667244 - LTR28 LTR ERV1 0 1020 119 607 178 208 6 chr2 156589350 156589510 -96667073 - LTR28 LTR ERV1 -286 178 1 4152 138 82 10 chr2 156590446 156590965 -96665618 - LTR39 LTR ERV1 0 783 194 3204 167 36 57 chr2 156590965 156591707 -96664876 - LTR8A LTR ERV1 0 727 1 4152 138 82 10 chr2 156591707 156591917 -96664666 - LTR39 LTR ERV1 -589 194 1 263 366 0 22 chr2 156592372 156592506 -96664077 + MIR SINE MIR 81 211 -51 2696 150 56 4 chr2 156592687 156593201 -96663382 + LTR49 LTR ERV1 1 541 -54 209 108 27 0 chr2 156593201 156593238 -96663345 + (TG)n Simple_repeat Simple_repeat 2 39 0 642 310 52 62 chr2 156593361 156593633 -96662950 + L2 LINE L2 2005 2273 -1041 2355 139 26 3 chr2 156593633 156594014 -96662569 - MLT1B LTR MaLR 0 390 1 642 310 52 62 chr2 156594014 156594147 -96662436 + L2 LINE L2 2273 2406 -908 452 260 75 20 chr2 156594226 156594372 -96662211 + L2 LINE L2 3160 3313 0 494 308 28 0 chr2 156594380 156594523 -96662060 - MIR SINE MIR -83 179 33 22 0 0 0 chr2 156595540 156595562 -96661021 + AT_rich Low_complexity Low_complexity 1 22 0 320 372 7 0 chr2 156595685 156595830 -96660753 - L1M4 LINE L1 -1510 4636 4491 967 198 64 0 chr2 156595849 156596051 -96660532 - MER20 DNA MER1_type -4 215 1 375 293 14 66 chr2 156596067 156596328 -96660255 + L1MC4a LINE L1 5663 5822 -340 312 250 83 0 chr2 156596387 156596471 -96660112 - FLAM SINE Alu -5 128 38 32 26 0 0 chr2 156596676 156596715 -96659868 + AT_rich Low_complexity Low_complexity 1 39 0 2406 172 12 93 chr2 156596764 156597335 -96659248 + MLT2B3 LTR ERVL 2 526 -28 2314 195 25 2 chr2 156597346 156597793 -96658790 + LTR32 LTR ERVL 15 471 0 3541 180 69 34 chr2 156598322 156598733 -96657850 - MER54A LTR ERVL -2 899 504 3395 107 21 60 chr2 156598733 156598786 -96657797 - LTR49 LTR ERV1 0 595 541 234 0 0 0 chr2 156598786 156598812 -96657771 + (A)n Simple_repeat Simple_repeat 1 26 0 3395 107 21 60 chr2 156598812 156599352 -96657231 - LTR49 LTR ERV1 -54 541 1 3541 180 69 34 chr2 156599352 156599810 -96656773 - MER54A LTR ERVL -397 504 14 2052 136 35 44 chr2 156599817 156600184 -96656399 + THE1B LTR MaLR 1 364 0 1141 288 82 19 chr2 156601054 156601516 -96655067 + HAL1 LINE L1 455 945 -1562 1127 217 63 50 chr2 156601544 156601926 -96654657 - MER74B LTR ERVL -36 586 200 1323 155 158 49 chr2 156601926 156602255 -96654328 - MLT1A1 LTR MaLR 0 365 1 6782 192 43 87 chr2 156602255 156603280 -96653303 - MLT1A1-int LTR MaLR 0 1735 822 2137 124 51 28 chr2 156603280 156603636 -96652947 - THE1B LTR MaLR 0 364 1 6782 192 43 87 chr2 156603636 156604424 -96652159 - MLT1A1-int LTR MaLR -913 822 1 1107 233 101 53 chr2 156604424 156604802 -96651781 - MSTD LTR MaLR 0 396 1 803 226 20 10 chr2 156604802 156604997 -96651586 - MER74B LTR ERVL -418 204 8 330 26 0 0 chr2 156604997 156605036 -96651547 + (CA)n Simple_repeat Simple_repeat 2 40 0 1159 273 44 25 chr2 156605539 156605945 -96650638 - MLT1G LTR MaLR -69 521 108 419 118 12 12 chr2 156606496 156606581 -96650002 + L1PB4 LINE L1 6069 6153 -3 2181 259 59 51 chr2 156606825 156607946 -96648637 + HAL1 LINE L1 1042 2171 -336 1935 166 21 40 chr2 156607981 156608058 -96648525 + MER34B LTR ERV1 145 222 -343 2088 119 0 20 chr2 156608058 156608361 -96648222 + AluSx SINE Alu 1 297 -15 1935 166 21 40 chr2 156608361 156608712 -96647871 + MER34B LTR ERV1 222 565 0 4180 128 12 2 chr2 156608995 156609637 -96646946 - MER39B LTR ERV1 0 653 5 211 329 32 25 chr2 156609748 156609906 -96646677 - L2 LINE L2 -189 3083 2925 3854 102 45 13 chr2 156609997 156610559 -96646024 + MER39B LTR ERV1 3 588 -65 2235 115 3 3 chr2 156610559 156610864 -96645719 - AluSx SINE Alu -7 305 1 3854 102 45 13 chr2 156610864 156610927 -96645656 + MER39B LTR ERV1 588 648 -5 4346 148 45 14 chr2 156611130 156611887 -96644696 - LTR39 LTR ERV1 0 783 4 535 226 68 0 chr2 156614229 156614419 -96642164 - LTR37B LTR ERV1 -1 467 265 721 205 99 0 chr2 156614578 156614749 -96641834 - MER5A DNA MER1_type 0 189 2 697 224 8 73 chr2 156614871 156615116 -96641467 + LTR37A LTR ERV1 23 251 -175 452 167 58 22 chr2 156615185 156615323 -96641260 + LTR37A LTR ERV1 282 424 -2 2487 66 16 0 chr2 156616473 156616778 -96639805 - AluY SINE Alu -1 310 1 1769 191 125 92 chr2 156617040 156617126 -96639457 - LTR8A LTR ERV1 0 727 645 2292 114 0 0 chr2 156617126 156617425 -96639158 - AluSq SINE Alu -14 299 1 1769 191 125 92 chr2 156617425 156618010 -96638573 - LTR8A LTR ERV1 -82 645 34 292 204 21 11 chr2 156618101 156618194 -96638389 + MER53 DNA DNA 89 182 -7 * 315 184 26 0 chr2 156618134 156618210 -96638373 - MER53 DNA DNA -111 78 1 2574 145 57 17 chr2 156618492 156618962 -96637621 + LTR26B LTR ERV1 43 531 0 324 364 76 5 chr2 156619204 156619388 -96637195 + L3b LINE CR1 1168 1364 -219 1116 205 137 54 chr2 156619563 156619988 -96636595 + MER31B LTR ERV1 1 460 -6 1507 202 10 35 chr2 156620087 156620581 -96636002 + MER74A LTR ERVL 1 558 0 3097 105 9 0 chr2 156620666 156621096 -96635487 + MER57B LTR ERV1 1 434 0 263 289 70 26 chr2 156621439 156621553 -96635030 + L3b LINE CR1 1368 1486 -97 212 247 22 34 chr2 156621617 156621706 -96634877 + (TATATG)n Simple_repeat Simple_repeat 2 89 0 529 225 60 33 chr2 156622022 156622173 -96634410 + MLT1J1 LTR MaLR 13 167 -279 336 102 0 0 chr2 156623027 156623076 -96633507 + (CA)n Simple_repeat Simple_repeat 1 49 0 289 242 16 121 chr2 156624603 156624727 -96631856 + L2 LINE L2 3197 3307 -6 441 298 58 14 chr2 156626699 156626907 -96629676 + L1ME LINE L1 5512 5728 -393 299 308 13 0 chr2 156627499 156627577 -96629006 + L2 LINE L2 3194 3272 0 1070 136 48 35 chr2 156627901 156628010 -96628573 + L1MA9 LINE L1 6051 6157 -155 444 62 0 0 chr2 156628010 156628074 -96628509 + (CA)n Simple_repeat Simple_repeat 1 64 0 1070 136 48 35 chr2 156628074 156628192 -96628391 + L1MA9 LINE L1 6157 6281 -31 3395 143 9 7 chr2 156629645 156630227 -96626356 + L1MB3 LINE L1 5598 6180 -3 204 304 0 0 chr2 156630629 156630675 -96625908 + L2 LINE L2 3238 3283 -30 439 123 25 0 chr2 156630679 156630760 -96625823 + GA-rich Low_complexity Low_complexity 2 84 0 1684 146 43 98 chr2 156630836 156631185 -96625398 + MLT2D LTR ERVL 20 344 -70 528 45 0 0 chr2 156631185 156631252 -96625331 + (TC)n Simple_repeat Simple_repeat 2 68 0 1684 146 43 98 chr2 156631252 156631320 -96625263 + MLT2D LTR ERVL 344 414 0 463 316 0 0 chr2 156631457 156631609 -96624974 + MER117 DNA MER1_type 1 152 -45 272 341 40 60 chr2 156632451 156632703 -96623880 - L2 LINE L2 -185 3087 2841 1043 181 0 22 chr2 156633727 156633909 -96622674 - MER45A DNA AcHobo 0 178 1 647 283 24 15 chr2 156635108 156635313 -96621270 + MIR SINE MIR 50 256 -6 255 311 138 33 chr2 156636046 156636351 -96620232 + MLT1J LTR MaLR 1 337 -174 341 322 48 14 chr2 156636596 156636742 -96619841 + MIR SINE MIR 4 154 -108 304 253 72 12 chr2 156636847 156636930 -96619653 + L2 LINE L2 3171 3258 -14 186 378 37 22 chr2 156637632 156637767 -96618816 + MIR SINE MIR 106 242 -20 498 33 0 0 chr2 156638318 156638378 -96618205 + (CA)n Simple_repeat Simple_repeat 2 61 0 193 336 78 17 chr2 156638929 156639045 -96617538 + MIR3 SINE MIR 3 125 -83 349 285 39 39 chr2 156639131 156639261 -96617322 + MIR3 SINE MIR 69 198 -10 180 357 71 0 chr2 156639278 156639362 -96617221 + L2 LINE L2 3173 3262 -10 2114 132 31 11 chr2 156639384 156639741 -96616842 - THE1C LTR MaLR -11 364 1 189 0 0 0 chr2 156639837 156639858 -96616725 + (TC)n Simple_repeat Simple_repeat 1 21 0 650 162 26 0 chr2 156639881 156639998 -96616585 + L1PB4 LINE L1 6037 6156 0 618 257 47 7 chr2 156641338 156641506 -96615077 + MIR SINE MIR 6 172 -75 35 0 0 0 chr2 156641801 156641836 -96614747 + AT_rich Low_complexity Low_complexity 1 35 0 189 94 0 0 chr2 156642912 156642944 -96613639 + (TTTTTG)n Simple_repeat Simple_repeat 4 35 0 243 0 0 0 chr2 156643811 156643838 -96612745 + (CA)n Simple_repeat Simple_repeat 2 28 0 2001 118 0 38 chr2 156644040 156644353 -96612230 + AluSx SINE Alu 1 301 -11 219 36 0 0 chr2 156644478 156644506 -96612077 + (TG)n Simple_repeat Simple_repeat 2 29 0 2209 133 8 0 chr2 156644510 156644870 -96611713 - L1MB3 LINE L1 -7 6176 5814 1126 124 43 48 chr2 156644870 156645079 -96611504 - AluJo SINE Alu -22 290 83 663 161 0 0 chr2 156645079 156645197 -96611386 - L1MB3 LINE L1 -360 5823 5706 1741 227 37 7 chr2 156645302 156645738 -96610845 - MER110A LTR ERV1 -1 467 19 339 309 21 0 chr2 156645807 156645904 -96610679 - MIR SINE MIR -162 100 2 1224 233 48 27 chr2 156646323 156646653 -96609930 + MER58B DNA MER1_type 5 341 0 2742 165 81 6 chr2 156647411 156647931 -96608652 - MER89 LTR ERV1 0 559 1 187 325 138 0 chr2 156647954 156648034 -96608549 + L2 LINE L2 3180 3270 -2 22 0 0 0 chr2 156650577 156650599 -96605984 + AT_rich Low_complexity Low_complexity 1 22 0 261 241 19 0 chr2 156652359 156652413 -96604170 - MLT1K LTR MaLR -348 240 186 2161 179 21 24 chr2 156653500 156653968 -96602615 - MLT1C LTR MaLR 0 467 1 1788 163 22 4 chr2 156654501 156654799 -96601784 - AluJo SINE Alu 0 303 1 234 81 0 0 chr2 156654814 156654851 -96601732 + (TAGA)n Simple_repeat Simple_repeat 4 40 0 2313 112 0 0 chr2 156655048 156655344 -96601239 - AluSg SINE Alu -14 296 1 215 316 0 53 chr2 156656430 156656506 -96600077 - L2 LINE L2 -37 3235 3164 24 53 0 0 chr2 156656931 156656969 -96599614 + AT_rich Low_complexity Low_complexity 1 38 0 828 65 22 60 chr2 156657485 156657670 -96598913 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 218 194 18 0 chr2 156657673 156657787 -96598796 + GA-rich Low_complexity Low_complexity 1 116 0 283 318 49 41 chr2 156657787 156657999 -96598584 + MIR SINE MIR 15 232 -30 2351 112 0 3 chr2 156657999 156658312 -96598271 + AluSx SINE Alu 1 312 0 283 318 49 41 chr2 156658312 156658342 -96598241 + MIR SINE MIR 232 260 -2 1960 124 7 4 chr2 156658388 156658663 -96597920 - AluSx SINE Alu -36 276 1 267 275 42 84 chr2 156658842 156658984 -96597599 + MER5A DNA MER1_type 54 189 0 672 279 93 0 chr2 156659534 156659749 -96596834 + MIR SINE MIR 27 261 -1 283 321 9 46 chr2 156659758 156659867 -96596716 - MIR3 SINE MIR -46 162 58 228 254 32 0 chr2 156660861 156660924 -96595659 + MIR SINE MIR 183 247 -15 462 225 47 54 chr2 156660947 156661076 -96595507 + FLAM_A SINE Alu 1 128 -5 1924 187 59 37 chr2 156661899 156662391 -96594192 + MLT1D LTR MaLR 1 503 -2 259 293 98 29 chr2 156662885 156663059 -96593524 - LTR16C LTR ERVL -1 490 305 248 248 7 22 chr2 156664412 156664549 -96592034 + CT-rich Low_complexity Low_complexity 2 136 0 347 184 35 0 chr2 156665381 156665468 -96591115 - L1MB7 LINE L1 0 6184 6095 24 53 0 0 chr2 156665470 156665508 -96591075 + AT_rich Low_complexity Low_complexity 1 38 0 485 128 32 0 chr2 156665508 156665602 -96590981 - L1MB4 LINE L1 -13 6167 6071 24 32 0 0 chr2 156666308 156666339 -96590244 + AT_rich Low_complexity Low_complexity 1 31 0 290 187 0 0 chr2 156666489 156666564 -96590019 + L1MA7 LINE L1 6215 6289 -2 4354 145 42 76 chr2 156666622 156667374 -96589209 + L1MA7 LINE L1 5044 5793 -498 345 155 0 0 chr2 156667374 156667432 -96589151 + Alu SINE Alu 235 292 -10 4354 145 42 76 chr2 156667432 156667911 -96588672 + L1MA7 LINE L1 5793 6287 -4 685 154 0 110 chr2 156669204 156669386 -96587197 + L1MA7 LINE L1 6090 6251 -40 576 0 0 0 chr2 156669386 156669450 -96587133 + (TA)n Simple_repeat Simple_repeat 2 65 0 270 0 0 0 chr2 156669465 156669495 -96587088 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 414 0 0 0 chr2 156669749 156669795 -96586788 + (TA)n Simple_repeat Simple_repeat 1 46 0 34 24 0 0 chr2 156669808 156669849 -96586734 + AT_rich Low_complexity Low_complexity 1 41 0 2334 122 0 0 chr2 156670101 156670413 -96586170 + AluSx SINE Alu 1 312 0 210 150 0 0 chr2 156673166 156673206 -96583377 + (A)n Simple_repeat Simple_repeat 1 40 0 28 48 0 0 chr2 156673406 156673448 -96583135 + AT_rich Low_complexity Low_complexity 1 42 0 287 176 0 44 chr2 156673705 156673773 -96582810 + MER34C LTR ERV1 29 93 -492 1273 212 53 50 chr2 156673805 156674292 -96582291 + MER34B LTR ERV1 62 526 -16 971 273 69 12 chr2 156674880 156675312 -96581271 + L1MC4a LINE L1 5664 6120 -1688 658 175 0 25 chr2 156676030 156676150 -96580433 - AluSg/x SINE Alu -20 292 176 295 245 81 18 chr2 156676434 156676608 -96579975 - MLT1L LTR MaLR -5 610 395 929 288 15 27 chr2 156676696 156677033 -96579550 - MLT1I LTR MaLR -16 393 61 275 338 0 12 chr2 156677131 156677211 -96579372 - MLT1K LTR MaLR -377 211 133 216 158 0 0 chr2 156677975 156678013 -96578570 + (CA)n Simple_repeat Simple_repeat 1 38 0 32 26 0 0 chr2 156678903 156678942 -96577641 + AT_rich Low_complexity Low_complexity 1 39 0 5434 153 64 13 chr2 156679266 156680481 -96576102 + L1MC1 LINE L1 5039 6317 -16 231 59 15 73 chr2 156681223 156681237 -96575346 + (TAAAA)n Simple_repeat Simple_repeat 2 15 -50 2189 101 7 3 chr2 156681237 156681524 -96575059 + AluSx SINE Alu 1 288 -24 231 59 15 73 chr2 156681524 156681577 -96575006 + (TAAAA)n Simple_repeat Simple_repeat 15 65 0 2354 84 0 3 chr2 156681808 156682105 -96574478 + AluSg SINE Alu 1 296 -14 23 54 0 0 chr2 156682980 156683017 -96573566 + AT_rich Low_complexity Low_complexity 1 37 0 2337 80 0 0 chr2 156683017 156683306 -96573277 + AluY SINE Alu 1 289 -22 306 73 0 0 chr2 156683398 156683439 -96573144 + (TA)n Simple_repeat Simple_repeat 2 42 0 25 0 0 0 chr2 156684035 156684060 -96572523 + AT_rich Low_complexity Low_complexity 1 25 0 303 323 21 0 chr2 156684625 156684718 -96571865 + L1MC4 LINE L1 6613 6707 -1335 225 275 48 53 chr2 156684744 156684933 -96571650 + L1ME LINE L1 5258 5445 -725 2391 92 0 0 chr2 156685551 156685857 -96570726 - AluSp SINE Alu -7 306 1 230 203 68 27 chr2 156686129 156686203 -96570380 - MLT1A1 LTR MaLR -7 358 282 1585 146 25 4 chr2 156686380 156686654 -96569929 - MLT1A1 LTR MaLR -85 280 1 465 253 78 27 chr2 156686875 156687132 -96569451 - HAL1 LINE L1 -105 2402 2133 189 74 0 0 chr2 156687350 156687377 -96569206 + (TCCC)n Simple_repeat Simple_repeat 3 29 0 711 289 62 25 chr2 156687479 156687598 -96568985 - L1ME LINE L1 -554 5608 5495 219 69 0 0 chr2 156687598 156687627 -96568956 + (CA)n Simple_repeat Simple_repeat 2 30 0 396 0 0 0 chr2 156687632 156687676 -96568907 + (TA)n Simple_repeat Simple_repeat 1 44 0 711 289 62 25 chr2 156687676 156687908 -96568675 - L1ME LINE L1 -670 5492 5270 1569 165 53 0 chr2 156687908 156688174 -96568409 - AluJb SINE Alu -32 280 1 711 289 62 25 chr2 156688174 156688505 -96568078 - L1ME LINE L1 -892 5270 4884 204 122 0 0 chr2 156688528 156688569 -96568014 + (A)n Simple_repeat Simple_repeat 1 41 0 252 0 0 0 chr2 156688745 156688773 -96567810 + (CA)n Simple_repeat Simple_repeat 1 28 0 1564 259 116 31 chr2 156688862 156689466 -96567117 + L1MEc LINE L1 1060 1611 -4785 2170 119 0 3 chr2 156689466 156689759 -96566824 + AluSq SINE Alu 6 297 -16 1564 259 116 31 chr2 156689759 156690245 -96566338 + L1MEc LINE L1 1611 2243 -4153 2968 163 34 7 chr2 156690246 156690916 -96565667 + L1MA4A LINE L1 5522 6260 -40 1578 207 3 30 chr2 156690940 156691239 -96565344 + AluJo SINE Alu 1 291 -21 2549 235 69 25 chr2 156691262 156692310 -96564273 + L1MEc LINE L1 2190 3283 -2932 301 218 0 0 chr2 156692316 156692371 -96564212 + Tigger7 DNA MER2_type 1 55 -495 305 352 21 21 chr2 156692381 156692526 -96564057 + L1MEc LINE L1 3286 3430 -2785 892 98 93 11 chr2 156692529 156692853 -96563730 + LTR7 LTR ERV1 1 450 0 12571 140 12 24 chr2 156692853 156695573 -96561010 + HERVH LTR ERV1 1 2995 -4718 2524 144 0 40 chr2 156695552 156696023 -96560560 + HERVH LTR ERV1 3140 3591 -4122 * 1152 111 6 0 chr2 156696017 156696197 -96560386 + HERVH LTR ERV1 3811 3991 -3722 * 13177 122 3 5 chr2 156696224 156698294 -96558289 + HERVH LTR ERV1 3993 6016 -1697 3707 89 5 16 chr2 156698287 156698850 -96557733 + HERVH LTR ERV1 7157 7713 0 * 2020 89 70 6 chr2 156698850 156699216 -96557367 + LTR7 LTR ERV1 1 450 0 13223 135 6 21 chr2 156699338 156701834 -96554749 + HERVH LTR ERV1 1530 3993 -3720 895 201 11 11 chr2 156701817 156702043 -96554540 + HERVH LTR ERV1 3955 5130 -1961 * 2318 75 7 0 chr2 156702043 156702348 -96554235 + L1PA8 LINE L1 5864 6170 -2 189 0 0 0 chr2 156703799 156703820 -96552763 + (CA)n Simple_repeat Simple_repeat 2 22 0 1743 238 33 68 chr2 156704316 156704616 -96551967 - L1ME3A LINE L1 -12 6092 5783 1463 171 46 0 chr2 156704616 156704920 -96551663 - L1MA4 LINE L1 -3 6297 5980 1743 238 33 68 chr2 156704920 156705343 -96551240 - L1ME3A LINE L1 -321 5783 5394 1280 283 76 10 chr2 156705365 156705958 -96550625 - L1ME3A LINE L1 -1887 4193 3562 294 264 30 102 chr2 156706363 156706598 -96549985 - L1ME3A LINE L1 -5847 223 6 33 0 0 0 chr2 156707348 156707381 -96549202 + AT_rich Low_complexity Low_complexity 1 33 0 1707 188 42 14 chr2 156707867 156708224 -96548359 + MER39 LTR ERV1 341 707 0 1972 152 3 16 chr2 156708886 156709195 -96547388 - AluJo SINE Alu -7 305 1 14004 131 39 10 chr2 156709328 156711441 -96545142 - Tigger1 DNA MER2_type 0 2418 229 4186 75 15 0 chr2 156711441 156711987 -96544596 - MER41A LTR ERV1 0 554 1 14004 131 39 10 chr2 156711987 156712223 -96544360 - Tigger1 DNA MER2_type -2189 229 1 190 271 0 0 chr2 156712901 156712949 -96543634 + L2 LINE L2 3256 3303 -10 26 0 0 0 chr2 156712972 156712998 -96543585 + AT_rich Low_complexity Low_complexity 1 26 0 1294 190 99 51 chr2 156713112 156713585 -96542998 + LTR54B LTR ERV1 1 496 -2 225 262 0 0 chr2 156714316 156714358 -96542225 - L3 LINE CR1 -110 1467 1426 1515 208 30 46 chr2 156714454 156714939 -96541644 + MER39 LTR ERV1 21 682 -25 242 235 66 78 chr2 156715049 156715215 -96541368 + L2 LINE L2 3150 3313 0 508 310 53 16 chr2 156716301 156716488 -96540095 + MIR SINE MIR 21 214 -48 2283 136 8 70 chr2 156716497 156716983 -96539600 + LTR32 LTR ERVL 15 470 -1 268 285 0 26 chr2 156716994 156717145 -96539438 + (TTA)n Simple_repeat Simple_repeat 3 149 0 350 283 162 61 chr2 156717893 156718091 -96538492 - MIR SINE MIR -14 248 31 487 279 26 26 chr2 156718336 156718490 -96538093 + L2 LINE L2 3160 3313 0 225 0 0 0 chr2 156719795 156719820 -96536763 + (A)n Simple_repeat Simple_repeat 1 25 0 209 218 0 36 chr2 156720237 156720292 -96536291 + CT-rich Low_complexity Low_complexity 2 54 0 235 240 40 0 chr2 156720705 156720755 -96535828 - L2 LINE L2 -1897 1417 1366 416 242 66 82 chr2 156721705 156722085 -96534498 - L1MCa LINE L1 -5016 1925 1552 636 251 48 5 chr2 156722109 156722296 -96534287 + MER58C DNA MER1_type 21 215 0 1664 226 80 37 chr2 156722296 156722925 -96533658 - L1MCa LINE L1 -4947 1476 821 405 302 91 55 chr2 156723110 156723532 -96533051 - L1MCa LINE L1 -5912 511 106 2296 104 0 3 chr2 156723532 156723829 -96532754 + AluSp SINE Alu 1 296 -17 195 42 0 0 chr2 156723832 156723856 -96532727 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 405 302 91 55 chr2 156723856 156723922 -96532661 - L1MCa LINE L1 -6318 105 1 10426 157 15 104 chr2 156724323 156726943 -96529640 + L1M4c LINE L1 1 2407 -4761 2299 103 3 22 chr2 156726957 156727276 -96529307 + AluSq SINE Alu 1 313 0 597 262 2 18 chr2 156727276 156727556 -96529027 + L1M4c LINE L1 3119 3393 -3774 384 194 21 2 chr2 156728683 156728787 -96527796 + Ricksha DNA DNA 4 154 -1100 22 70 0 0 chr2 156729453 156729496 -96527087 + AT_rich Low_complexity Low_complexity 1 43 0 543 271 17 118 chr2 156729496 156730031 -96526552 - Charlie7 DNA MER1_type -1918 694 214 284 155 35 0 chr2 156730091 156730149 -96526434 + L1MB4 LINE L1 5110 5169 -977 3173 172 41 12 chr2 156730204 156731040 -96525543 + L1MB4 LINE L1 5110 5962 -218 3724 119 48 8 chr2 156731157 156731768 -96524815 + MER41B LTR ERV1 1 635 0 1122 166 29 12 chr2 156731784 156732030 -96524553 + MER21B LTR ERV1 548 867 -64 487 319 75 0 chr2 156733078 156733266 -96523317 - MIR SINE MIR -37 225 24 247 350 21 31 chr2 156733728 156733825 -96522758 + L3 LINE CR1 1475 1570 -7 189 237 0 0 chr2 156733903 156733941 -96522642 - L2 LINE L2 -13 3300 3263 12701 175 27 19 chr2 156734563 156738226 -96518357 + L1MA5 LINE L1 2638 6345 -191 2268 85 0 10 chr2 156738226 156738519 -96518064 + AluSc SINE Alu 1 290 -19 12701 175 27 19 chr2 156738519 156738711 -96517872 + L1MA5 LINE L1 6345 6534 -2 23 0 0 0 chr2 156738711 156738734 -96517849 + AT_rich Low_complexity Low_complexity 1 23 0 199 225 0 0 chr2 156739528 156739568 -96517015 + L3 LINE CR1 1531 1570 -7 1093 183 83 0 chr2 156740241 156740482 -96516101 + L1MB4 LINE L1 5919 6179 -1 1681 176 0 21 chr2 156740592 156740881 -96515702 - AluJb SINE Alu -29 283 1 188 270 135 14 chr2 156741341 156741415 -96515168 - L3b LINE CR1 -18 1565 1483 5559 142 23 17 chr2 156742174 156743871 -96512712 + L1MA5 LINE L1 4588 6298 -2 259 277 12 12 chr2 156743916 156743999 -96512584 + MIR SINE MIR 72 154 -108 2192 103 3 0 chr2 156746202 156746493 -96510090 + AluSx SINE Alu 1 292 -20 280 343 112 0 chr2 156746562 156746705 -96509878 + MIR3 SINE MIR 43 201 -7 1986 146 0 23 chr2 156747429 156747730 -96508853 + AluJo SINE Alu 1 294 -18 1482 181 84 29 chr2 156747964 156748307 -96508276 + LTR44 LTR ERV1 29 390 -129 1990 120 125 33 chr2 156748307 156748379 -96508204 - MSTA LTR MaLR 0 428 364 4216 80 5 10 chr2 156748379 156748955 -96507628 + L1PA11 LINE L1 5600 6172 -2 1990 120 125 33 chr2 156748955 156749274 -96507309 - MSTA LTR MaLR -64 364 1 834 111 0 0 chr2 156749275 156749401 -96507182 + LTR44 LTR ERV1 387 512 -7 217 195 0 0 chr2 156750118 156750159 -96506424 + L2 LINE L2 3271 3311 -2 731 268 21 16 chr2 156752521 156752715 -96503868 - MIR SINE MIR -20 242 48 2554 246 33 29 chr2 156752918 156753819 -96502764 + L1MD2 LINE L1 4426 5330 -816 3708 210 79 23 chr2 156753865 156754022 -96502561 + L1MD2 LINE L1 5295 5442 -917 2357 61 0 35 chr2 156754022 156754335 -96502248 + AluY SINE Alu 1 302 -9 3708 210 79 23 chr2 156754335 156755173 -96501410 + L1MD2 LINE L1 5442 6346 -13 2309 113 0 3 chr2 156755798 156756109 -96500474 + AluSg SINE Alu 1 310 0 691 150 15 15 chr2 156758063 156758196 -96498387 + MLT1A2 LTR MaLR 1 133 -232 1893 158 0 7 chr2 156758241 156758532 -96498051 + AluJb SINE Alu 10 298 -14 309 82 0 0 chr2 156758562 156758611 -96497972 + (TC)n Simple_repeat Simple_repeat 2 50 0 838 161 0 88 chr2 156758651 156758843 -96497740 + MLT1A2 LTR MaLR 189 363 -11 2725 68 0 0 chr2 156758919 156759270 -96497313 + L1PA8 LINE L1 5819 6169 -3 588 287 112 14 chr2 156759375 156759598 -96496985 - MIR SINE MIR -11 251 7 1271 281 6 11 chr2 156759907 156760260 -96496323 + MLT1I LTR MaLR 59 409 0 886 143 86 34 chr2 156760307 156760482 -96496101 + MER20 DNA MER1_type 25 208 -11 312 294 38 60 chr2 156760573 156760808 -96495775 - MLT1J LTR MaLR -52 459 230 315 274 26 60 chr2 156762464 156762581 -96494002 + MIR SINE MIR 19 131 -77 1302 209 65 19 chr2 156762594 156762919 -96493664 - MLT1F LTR MaLR -6 536 197 300 246 121 52 chr2 156763080 156763312 -96493271 - HAL1 LINE L1 0 2507 2260 1357 192 42 42 chr2 156763636 156763923 -96492660 + AluJo SINE Alu 1 287 -25 3061 145 34 7 chr2 156763949 156764508 -96492075 - L1MB3 LINE L1 -15 6168 5595 1371 168 61 2 chr2 156764509 156764918 -96491665 - L1MB3 LINE L1 -695 5485 5059 1246 211 4 0 chr2 156765018 156765297 -96491286 - L1MB3 LINE L1 -1059 5087 4808 1090 220 181 44 chr2 156765299 156765803 -96490780 - HAL1 LINE L1 -433 2074 1502 261 385 109 4 chr2 156765831 156766070 -96490513 - L2 LINE L2 -571 2743 2480 5007 122 8 31 chr2 156766208 156767047 -96489536 - MER4D LTR ERV1 0 903 84 21 95 0 0 chr2 156767047 156767110 -96489473 + AT_rich Low_complexity Low_complexity 1 63 0 1197 49 0 0 chr2 156767214 156767358 -96489225 - L1PA7 LINE L1 -8 6146 6003 492 134 12 0 chr2 156767360 156767442 -96489141 - MER4D LTR ERV1 -788 84 2 194 61 0 30 chr2 156767578 156767611 -96488972 + (CA)n Simple_repeat Simple_repeat 1 32 0 269 294 39 10 chr2 156767667 156767769 -96488814 + L3 LINE CR1 1472 1576 -1 2549 160 22 13 chr2 156767874 156768373 -96488210 + MER41B LTR ERV1 130 466 -12 2092 112 14 3 chr2 156768516 156768812 -96487771 - AluSx SINE Alu -13 299 1 2561 4 0 4 chr2 156769594 156769874 -96486709 + AluY SINE Alu 28 306 -5 1446 187 126 25 chr2 156770032 156770358 -96486225 - MLT1A1 LTR MaLR -11 354 5 550 288 81 30 chr2 156771502 156772061 -96484522 - L1ME4a LINE L1 -4 6117 5531 823 293 56 32 chr2 156772560 156772809 -96483774 - MIR SINE MIR 0 262 8 1918 137 10 3 chr2 156773327 156773619 -96482964 + AluSq SINE Alu 1 294 -19 198 71 0 0 chr2 156774583 156774611 -96481972 + (ATG)n Simple_repeat Simple_repeat 3 30 0 348 353 8 8 chr2 156774910 156775032 -96481551 + MIR SINE MIR 30 151 -57 357 246 8 16 chr2 156775335 156775457 -96481126 + (TCTA)n Simple_repeat Simple_repeat 2 122 0 1862 156 7 10 chr2 156775732 156776027 -96480556 - AluJo SINE Alu -14 298 5 2094 222 55 8 chr2 156776208 156776698 -96479885 - MLT1F LTR MaLR -15 527 15 649 119 56 21 chr2 156778024 156778167 -96478416 + L1MA8 LINE L1 6142 6289 -2 24 0 0 0 chr2 156778167 156778191 -96478392 + AT_rich Low_complexity Low_complexity 1 24 0 2393 105 19 3 chr2 156778224 156778586 -96477997 - L1PA11 LINE L1 0 6174 5807 1771 205 63 97 chr2 156778691 156779339 -96477244 - MLT1E2 LTR MaLR 0 626 1 21 57 0 0 chr2 156779699 156779734 -96476849 + AT_rich Low_complexity Low_complexity 1 35 0 196 167 19 19 chr2 156781265 156781319 -96475264 + (TA)n Simple_repeat Simple_repeat 1 54 0 382 305 21 89 chr2 156781382 156781572 -96475011 - MIR SINE MIR -40 222 46 535 252 126 34 chr2 156781727 156782204 -96474379 + L1ME3A LINE L1 4755 5275 -871 807 301 65 20 chr2 156782236 156782823 -96473760 + L1ME3A LINE L1 5338 5950 -220 245 179 0 60 chr2 156783055 156783122 -96473461 + GA-rich Low_complexity Low_complexity 3 65 0 21 36 0 0 chr2 156783182 156783210 -96473373 + AT_rich Low_complexity Low_complexity 1 28 0 1563 170 55 13 chr2 156783232 156783614 -96472969 + L1MCa LINE L1 2056 2453 -3973 23 0 0 0 chr2 156784017 156784040 -96472543 + AT_rich Low_complexity Low_complexity 1 23 0 256 206 82 0 chr2 156784506 156784603 -96471980 - L1MC5 LINE L1 -596 7365 7261 911 238 91 78 chr2 156784815 156784928 -96471655 - L2 LINE L2 -58 3255 3145 2062 144 0 3 chr2 156784928 156785241 -96471342 + AluJb SINE Alu 1 312 0 911 238 91 78 chr2 156785241 156785715 -96470868 - L2 LINE L2 -168 3145 2655 1468 265 24 20 chr2 156785729 156786223 -96470360 + L1MCb LINE L1 1 496 -5549 1135 203 50 34 chr2 156787751 156788072 -96468511 - MLT1C LTR MaLR -8 459 134 442 182 48 39 chr2 156788138 156788290 -96468293 - MLT1C LTR MaLR -305 162 3 768 160 30 15 chr2 156788623 156788754 -96467829 + FLAM_A SINE Alu 1 133 0 22 0 0 0 chr2 156789169 156789191 -96467392 + AT_rich Low_complexity Low_complexity 1 22 0 304 265 65 120 chr2 156789974 156790450 -96466133 + LTR16A LTR ERVL 1 450 0 331 316 22 14 chr2 156790749 156790888 -96465695 - L3b LINE CR1 -334 1249 1110 2210 108 3 13 chr2 156791807 156792121 -96464462 - AluY SINE Alu 0 311 1 225 357 9 18 chr2 156792164 156792276 -96464307 - L2 LINE L2 -4 3309 3199 435 92 0 0 chr2 156792672 156792737 -96463846 + (T)n Simple_repeat Simple_repeat 1 65 0 335 187 154 0 chr2 156792837 156792928 -96463655 + Ricksha DNA DNA 185 289 -2957 * 3221 117 19 39 chr2 156792925 156793490 -96463093 + Ricksha DNA DNA 1820 2373 -873 2808 145 41 0 chr2 156793496 156794006 -96462577 + Ricksha DNA DNA 2501 3031 -220 1768 132 8 69 chr2 156794007 156794370 -96462213 - MER61A LTR ERV1 -2 341 1 715 91 55 0 chr2 156794370 156794480 -96462103 - MER61A-int LTR ERV1 0 5217 5102 503 180 26 35 chr2 156794483 156794654 -96461929 + Ricksha DNA DNA 3098 3249 -5 497 267 63 57 chr2 156796014 156796114 -96460469 + MLT1J2 LTR MaLR 149 247 -203 545 245 147 6 chr2 156796114 156796277 -96460306 + MER5A DNA MER1_type 4 189 0 497 267 63 57 chr2 156796277 156796476 -96460107 + MLT1J2 LTR MaLR 247 450 0 2980 100 28 0 chr2 156798445 156798876 -96457707 + L1PB4 LINE L1 5701 6143 -13 1882 179 3 0 chr2 156798897 156799188 -96457395 + AluJb SINE Alu 1 292 -20 2227 158 82 18 chr2 156799362 156799887 -96456696 + LTR49 LTR ERV1 1 611 -11 749 189 7 14 chr2 156799894 156800037 -96456546 - FRAM SINE Alu -30 146 5 422 264 82 7 chr2 156800087 156800226 -96456357 - MIR SINE MIR -62 146 1 563 235 79 71 chr2 156800246 156800688 -96455895 + MER21B LTR ERV1 11 465 -398 285 274 255 20 chr2 156801182 156801335 -96455248 - MER5A DNA MER1_type 0 189 1 511 156 0 0 chr2 156802370 156802447 -96454136 - AluSp SINE Alu -95 218 142 2047 149 16 0 chr2 156802455 156802763 -96453820 - AluSq SINE Alu 0 313 1 21 57 0 0 chr2 156803523 156803558 -96453025 + AT_rich Low_complexity Low_complexity 1 35 0 978 213 29 143 chr2 156803685 156804132 -96452451 + MSTD LTR MaLR 1 396 0 404 161 0 11 chr2 156804213 156804300 -96452283 + (TA)n Simple_repeat Simple_repeat 1 86 0 3167 208 42 18 chr2 156804339 156805122 -96451461 - L1MB7 LINE L1 -30 6154 5353 249 57 0 0 chr2 156805134 156805169 -96451414 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2139 107 3 3 chr2 156805172 156805462 -96451121 - AluSq SINE Alu -23 290 1 195 339 45 45 chr2 156805740 156805852 -96450731 + L2 LINE L2 3197 3308 -5 381 350 19 19 chr2 156806011 156806171 -96450412 + MER5A DNA MER1_type 9 168 -21 2465 11 0 4 chr2 156806726 156807000 -96449583 + AluYa5 SINE Alu 39 311 0 491 229 13 72 chr2 156807225 156807378 -96449205 + MLT1G1 LTR MaLR 1 144 -451 315 229 48 0 chr2 156807450 156807533 -96449050 + MLT1H1 LTR MaLR 202 288 -302 367 247 93 74 chr2 156807617 156807779 -96448804 + MLT1H1 LTR MaLR 431 555 0 404 232 138 14 chr2 156807801 156807939 -96448644 + L2 LINE L2 3151 3305 -8 818 56 112 0 chr2 156808140 156808265 -96448318 + MER85 DNA T2_type 1 139 0 346 247 39 0 chr2 156809686 156809763 -96446820 + Tigger3(Golem) DNA MER2_type 1 80 -2949 532 162 50 0 chr2 156809876 156809975 -96446608 + Tigger3(Golem) DNA MER2_type 2919 3022 -7 1366 243 11 32 chr2 156810029 156810403 -96446180 - MLT1A2 LTR MaLR -4 370 5 3121 132 45 2 chr2 156810883 156811420 -96445163 + MER34B LTR ERV1 1 560 -5 451 274 41 69 chr2 156814267 156814501 -96442082 - MIR SINE MIR -25 237 15 661 152 0 0 chr2 156815349 156815454 -96441129 - FRAM SINE Alu -12 164 60 2807 251 83 25 chr2 156815559 156815683 -96440900 + MER69B DNA AcHobo 4 119 -2407 198 0 0 0 chr2 156815683 156815705 -96440878 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 2807 251 83 25 chr2 156815705 156816278 -96440305 + MER69B DNA AcHobo 119 773 -1753 802 226 0 0 chr2 156816278 156816442 -96440141 - FRAM SINE Alu -2 164 1 2807 251 83 25 chr2 156816442 156816693 -96439890 + MER69B DNA AcHobo 773 1008 -218 663 228 24 0 chr2 156816802 156817008 -96439575 + MER69B DNA AcHobo 1016 1226 0 22 56 0 0 chr2 156817503 156817539 -96439044 + AT_rich Low_complexity Low_complexity 1 36 0 387 0 0 0 chr2 156818267 156818310 -96438273 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 278 192 137 0 chr2 156818358 156818431 -96438152 - MIR SINE MIR -70 192 110 2442 74 0 0 chr2 156818597 156818907 -96437676 + AluY SINE Alu 1 310 -1 1165 152 49 168 chr2 156819405 156819755 -96436828 - AluJb SINE Alu 0 302 1 2711 82 6 0 chr2 156822714 156823067 -96433516 - THE1A LTR MaLR 0 355 1 1070 294 126 41 chr2 156824754 156825359 -96431224 + L2 LINE L2 1712 2367 -947 4200 109 35 6 chr2 156825734 156826369 -96430214 - MER39B LTR ERV1 0 653 1 5092 55 3 0 chr2 156826820 156827455 -96429128 - L1PA7 LINE L1 -2 6152 5516 253 393 56 0 chr2 156828357 156828464 -96428119 - L2 LINE L2 -4 3268 3156 618 212 68 0 chr2 156829580 156829712 -96426871 - L2 LINE L2 0 3313 3173 243 0 0 0 chr2 156830600 156830627 -96425956 + (CA)n Simple_repeat Simple_repeat 2 28 0 716 294 91 24 chr2 156832470 156832766 -96423817 + L2 LINE L2 2988 3303 -10 2731 97 11 3 chr2 156832862 156833234 -96423349 - THE1C LTR MaLR 0 375 1 22 35 0 0 chr2 156833350 156833379 -96423204 + AT_rich Low_complexity Low_complexity 1 29 0 2309 86 6 37 chr2 156833673 156833788 -96422795 - L1PA8 LINE L1 -2 6170 6053 1971 89 22 19 chr2 156833788 156834057 -96422526 - AluY SINE Alu -15 296 27 2309 86 6 37 chr2 156834057 156834290 -96422293 - L1PA8 LINE L1 -119 6053 5833 442 242 242 8 chr2 156834541 156834781 -96421802 + HAL1 LINE L1 42 337 -2170 4430 138 34 63 chr2 156835544 156836403 -96420180 + L1MA8 LINE L1 4507 5389 -902 1743 171 3 36 chr2 156836403 156836712 -96419871 + AluSx SINE Alu 1 299 -13 4430 138 34 63 chr2 156836712 156837117 -96419466 + L1MA8 LINE L1 5389 5804 -487 539 55 0 0 chr2 156837117 156837188 -96419395 + L1PA11 LINE L1 6097 6169 -5 4430 138 34 63 chr2 156837188 156837731 -96418852 + L1MA8 LINE L1 5804 6249 -42 26 30 0 0 chr2 156837803 156837836 -96418747 + AT_rich Low_complexity Low_complexity 1 33 0 424 302 57 26 chr2 156837926 156838583 -96418000 + L1MCc LINE L1 1226 2118 -4942 2104 133 0 0 chr2 156838677 156838979 -96417604 + AluSx SINE Alu 1 302 -10 353 314 33 0 chr2 156839116 156839237 -96417346 + L2 LINE L2 3189 3313 0 194 279 73 0 chr2 156839676 156839744 -96416839 + MIR3 SINE MIR 85 157 -51 262 196 98 78 chr2 156839867 156839969 -96416614 + Charlie8 DNA MER1_type 90 193 -2224 2217 220 70 15 chr2 156839969 156840579 -96416004 - LTR48B LTR ERV1 0 644 1 1870 170 93 20 chr2 156840753 156841152 -96415431 - MSTA LTR MaLR 0 428 1 238 173 39 58 chr2 156841260 156841312 -96415271 + MIR3 SINE MIR 112 162 -46 515 321 14 21 chr2 156841510 156841800 -96414783 + L1MCc LINE L1 2239 2526 -4596 279 215 44 130 chr2 156842008 156842301 -96414282 + HAL1 LINE L1 825 1092 -1415 3370 61 5 0 chr2 156842303 156842732 -96413851 + L1PA7 LINE L1 5724 6154 0 1042 190 22 0 chr2 156842732 156842911 -96413672 + AluJb SINE Alu 130 312 0 2857 239 60 65 chr2 156843123 156844532 -96412051 + HAL1 LINE L1 1100 2501 -6 727 303 22 13 chr2 156846459 156846690 -96409893 + MIR SINE MIR 2 234 -28 508 286 38 16 chr2 156847341 156847526 -96409057 - MIR SINE MIR -3 259 71 27 0 0 0 chr2 156848434 156848461 -96408122 + AT_rich Low_complexity Low_complexity 1 27 0 221 333 11 0 chr2 156849546 156849633 -96406950 + CT-rich Low_complexity Low_complexity 1 88 0 819 243 35 5 chr2 156849973 156850175 -96406408 + MER58A DNA MER1_type 2 209 -15 230 236 36 0 chr2 156850588 156850643 -96405940 + MIR SINE MIR 113 169 -93 185 146 73 24 chr2 156850651 156850692 -96405891 + L2 LINE L2 3254 3296 -17 229 379 33 46 chr2 156850849 156851002 -96405581 - L2 LINE L2 0 3272 3122 504 317 116 9 chr2 156853356 156853580 -96403003 - MIR SINE MIR 0 262 15 22 0 0 0 chr2 156854198 156854220 -96402363 + AT_rich Low_complexity Low_complexity 1 22 0 1037 102 14 7 chr2 156855318 156855465 -96401118 - BC200 scRNA scRNA -47 153 6 243 222 153 0 chr2 156855478 156855550 -96401033 - L1ME LINE L1 -510 5611 5529 244 286 0 0 chr2 156857087 156857150 -96399433 + MLT1I LTR MaLR 347 409 0 1690 173 20 23 chr2 156857502 156857803 -96398780 + AluJo SINE Alu 1 300 -12 354 287 0 40 chr2 156858359 156858460 -96398123 + L2 LINE L2 3176 3272 0 310 290 137 8 chr2 156858571 156858702 -96397881 + MARNA DNA Mariner 16 163 -423 194 311 22 11 chr2 156858850 156858940 -96397643 - L2 LINE L2 -56 3257 3167 254 295 16 0 chr2 156859314 156859375 -96397208 + MIR SINE MIR 9 70 -192 1960 80 0 8 chr2 156859404 156859654 -96396929 - AluSg SINE Alu -62 248 1 1144 131 0 12 chr2 156859753 156859921 -96396662 - AluJb SINE Alu -8 304 139 1873 92 0 4 chr2 156859921 156860161 -96396422 - AluSq SINE Alu -74 239 1 21 36 0 0 chr2 156860826 156860854 -96395729 + AT_rich Low_complexity Low_complexity 1 28 0 1590 183 3 21 chr2 156860951 156861236 -96395347 - AluJo SINE Alu -32 280 1 345 274 145 8 chr2 156862791 156862908 -96393675 + MIR SINE MIR 10 142 -66 452 354 71 0 chr2 156862922 156863120 -96393463 - MIR SINE MIR -3 259 48 182 291 0 38 chr2 156863204 156863283 -96393300 + MIR SINE MIR 55 130 -78 367 254 85 49 chr2 156863440 156863626 -96392957 + MIR SINE MIR 15 207 -55 1999 110 21 25 chr2 156864351 156864655 -96391928 - AluSc SINE Alu 0 303 1 2319 99 3 0 chr2 156864803 156865096 -96391487 + AluSq SINE Alu 11 304 -9 272 324 82 33 chr2 156865417 156865599 -96390984 + MIR3 SINE MIR 12 202 -6 1510 111 14 0 chr2 156865738 156865955 -96390628 - AluSg/x SINE Alu -17 292 73 7805 185 22 21 chr2 156866055 156867798 -96388785 + L1PA15 LINE L1 3736 5489 -676 2316 108 0 10 chr2 156867798 156868103 -96388480 + AluSx SINE Alu 1 302 -10 7805 185 22 21 chr2 156868103 156868764 -96387819 + L1PA15 LINE L1 5489 6148 -17 1588 197 23 74 chr2 156869247 156869678 -96386905 + MLT1D-int LTR MaLR 963 1371 0 862 198 12 6 chr2 156869678 156869850 -96386733 + MLT1D LTR MaLR 1 173 -332 201 354 53 53 chr2 156870868 156870964 -96385619 - MIR SINE MIR -52 210 115 2533 59 0 0 chr2 156870964 156871268 -96385315 + AluY SINE Alu 1 304 -7 201 354 53 53 chr2 156871268 156871380 -96385203 - MIR SINE MIR -146 116 2 253 183 183 56 chr2 156872407 156872533 -96384050 - L1MC5 LINE L1 -30 7931 7790 930 157 0 0 chr2 156872607 156872747 -96383836 - FLAM_C SINE Alu -3 140 1 314 256 47 35 chr2 156872752 156872924 -96383659 - L1MC5 LINE L1 -280 7681 7508 1602 102 70 56 chr2 156873846 156874130 -96382453 + AluJb SINE Alu 16 303 -9 2124 121 7 7 chr2 156875296 156875593 -96380990 + AluSx SINE Alu 1 297 -15 1186 204 13 0 chr2 156875712 156875947 -96380636 + MER82 DNA MER2_type 25 262 -391 964 200 17 0 chr2 156877176 156877356 -96379227 - MER5A DNA MER1_type 0 189 7 459 277 27 27 chr2 156877443 156877591 -96378992 + MER5B DNA MER1_type 1 148 -30 1350 159 76 3 chr2 156877919 156878233 -96378350 - MSTA LTR MaLR 0 428 1 24 0 0 0 chr2 156880098 156880122 -96376461 + AT_rich Low_complexity Low_complexity 1 24 0 4861 107 25 14 chr2 156880154 156880959 -96375624 - Tigger3b DNA MER2_type -2 1229 416 1690 152 36 39 chr2 156880956 156881245 -96375338 - Tigger3b DNA MER2_type -2666 362 73 * 2368 91 0 0 chr2 156881245 156881541 -96375042 - AluSc SINE Alu -13 296 1 1690 152 36 39 chr2 156881541 156881614 -96374969 - Tigger3b DNA MER2_type -2955 73 1 876 246 101 4 chr2 156881614 156881890 -96374693 - L1MA9 LINE L1 -77 6235 5933 2314 116 0 0 chr2 156882249 156882552 -96374031 - AluSx SINE Alu -9 303 1 2085 112 17 0 chr2 156882924 156883211 -96373372 + AluSx SINE Alu 4 295 -17 740 225 92 17 chr2 156883672 156883845 -96372738 - MER5A DNA MER1_type 0 189 4 260 324 75 12 chr2 156884306 156884479 -96372104 - MLT1L LTR MaLR -73 542 359 374 291 167 24 chr2 156885366 156885576 -96371007 + MIR SINE MIR 2 241 -21 209 342 108 0 chr2 156886350 156886470 -96370113 + L2 LINE L2 3181 3313 0 279 54 0 0 chr2 156887367 156887404 -96369179 + (TC)n Simple_repeat Simple_repeat 2 38 0 526 238 16 0 chr2 156887602 156887728 -96368855 + LTR67 LTR ERVL 426 553 -4 290 233 23 47 chr2 156887858 156887944 -96368639 - MIR SINE MIR -88 120 37 1779 161 4 11 chr2 156887956 156888236 -96368347 - AluJo SINE Alu -22 290 13 2349 82 3 7 chr2 156889336 156889640 -96366943 + AluSq SINE Alu 1 303 -10 469 270 45 0 chr2 156889937 156890048 -96366535 - L2 LINE L2 -8 3305 3190 255 375 91 0 chr2 156890050 156890138 -96366445 + L2 LINE L2 3137 3232 -40 286 160 60 0 chr2 156890324 156890374 -96366209 - L2 LINE L2 -5 3267 3215 72 47 0 0 chr2 156890839 156890946 -96365637 + AT_rich Low_complexity Low_complexity 1 107 0 2216 103 0 13 chr2 156891113 156891415 -96365168 + AluSg SINE Alu 1 298 -12 1466 176 7 4 chr2 156891431 156891703 -96364880 + L1MC1 LINE L1 6061 6333 0 22 0 0 0 chr2 156892946 156892968 -96363615 + AT_rich Low_complexity Low_complexity 1 22 0 399 227 75 2 chr2 156894399 156894539 -96362044 + L1ME1 LINE L1 6006 6154 -10 282 325 26 26 chr2 156896075 156896189 -96360394 - MIR SINE MIR -97 165 52 2099 104 0 23 chr2 156896295 156896603 -96359980 + AluSx SINE Alu 1 301 -11 993 200 0 0 chr2 156897383 156897553 -96359030 + MIR SINE MIR 20 189 -73 1038 165 10 36 chr2 156897721 156897915 -96358668 + AluJb SINE Alu 120 308 -4 28 71 0 0 chr2 156897974 156898030 -96358553 + AT_rich Low_complexity Low_complexity 1 56 0 246 354 53 18 chr2 156898648 156898761 -96357822 + MIR3 SINE MIR 43 159 -49 267 277 32 0 chr2 156898766 156898860 -96357723 + MER117 DNA MER1_type 6 102 -95 21 0 0 0 chr2 156899256 156899277 -96357306 + AT_rich Low_complexity Low_complexity 1 21 0 1773 224 33 17 chr2 156899290 156899750 -96356833 - MLT1C LTR MaLR 0 467 1 682 250 79 62 chr2 156901710 156902050 -96354533 + MSTD LTR MaLR 51 396 0 273 285 69 6 chr2 156902476 156902653 -96353930 + L1MCa LINE L1 996 1357 -5059 240 289 52 21 chr2 156902666 156902860 -96353723 + L1MCa LINE L1 1530 1729 -4697 275 268 59 85 chr2 156902889 156903042 -96353541 - MIR3 SINE MIR -46 162 14 1937 158 3 17 chr2 156903139 156903437 -96353146 - AluSx SINE Alu -18 294 1 309 311 60 26 chr2 156905429 156905580 -96351003 + L1ME LINE L1 5483 5638 -483 262 247 63 35 chr2 156906443 156906617 -96349966 + Charlie7 DNA MER1_type 2434 2612 0 1701 166 14 7 chr2 156907154 156907443 -96349140 + AluSx SINE Alu 1 291 -21 687 221 70 22 chr2 156908202 156908474 -96348109 - MER45R DNA AcHobo 0 1581 1297 5017 198 8 1 chr2 156908474 156909576 -96347007 + L1 LINE L1 3738 4847 -1299 5169 140 18 4 chr2 156909591 156910800 -96345783 + L1PA16 LINE L1 4949 6166 0 805 186 109 5 chr2 156910802 156910995 -96345588 - MER45R DNA AcHobo -276 1305 1093 1469 222 10 44 chr2 156911064 156911186 -96345397 - L1MEc LINE L1 -5490 906 781 1769 169 23 20 chr2 156911186 156911488 -96345095 - AluJb SINE Alu -9 303 1 1469 222 10 44 chr2 156911488 156911770 -96344813 - L1MEc LINE L1 -5615 781 516 306 257 71 0 chr2 156911810 156911880 -96344703 + MER45R DNA AcHobo 447 521 -1060 613 264 50 42 chr2 156911881 156912363 -96344220 + L1MEc LINE L1 1170 1655 -4908 517 201 84 108 chr2 156912366 156912580 -96344003 + MER34C LTR ERV1 4 212 -373 284 235 61 41 chr2 156912617 156912715 -96343868 + LTR48 LTR ERV1 382 481 -306 380 219 96 14 chr2 156912753 156912930 -96343653 + LTR48 LTR ERV1 378 542 0 561 252 47 74 chr2 156912953 156913293 -96343290 + L1MEc LINE L1 1527 2009 -4554 2246 97 10 10 chr2 156913325 156913634 -96342949 + AluSc SINE Alu 1 309 0 3298 117 30 4 chr2 156913634 156914173 -96342410 + LTR24B LTR ERV1 18 570 -6 7333 143 48 78 chr2 156914207 156914304 -96342279 - Tigger1 DNA MER2_type 0 2418 2320 2407 118 20 8 chr2 156914304 156914660 -96341923 - THE1B LTR MaLR -2 362 3 7333 143 48 78 chr2 156914660 156914765 -96341818 - Tigger1 DNA MER2_type -98 2320 2213 1883 168 14 0 chr2 156914765 156915050 -96341533 + AluJo SINE Alu 1 289 -23 7333 143 48 78 chr2 156915050 156916174 -96340409 - Tigger1 DNA MER2_type -205 2213 1057 1899 148 0 28 chr2 156916174 156916492 -96340091 + AluJo SINE Alu 1 309 -3 2213 75 13 33 chr2 156916502 156916807 -96339776 + AluY SINE Alu 1 299 -12 7333 143 48 78 chr2 156916807 156917205 -96339378 - Tigger1 DNA MER2_type -1370 1048 733 273 250 0 0 chr2 156917305 156917373 -96339210 - MER34 LTR ERV1 -472 70 3 2114 95 14 0 chr2 156917462 156917877 -96338706 + AluSp SINE Alu 1 419 0 2402 241 97 42 chr2 156917878 156919031 -96337552 + L1MEc LINE L1 2278 3366 -3016 1586 128 97 0 chr2 156919031 156919288 -96337295 + AluSx SINE Alu 1 282 -30 2402 241 97 42 chr2 156919288 156919537 -96337046 + L1MEc LINE L1 3366 3600 -2782 2687 150 14 2 chr2 156919537 156919958 -96336625 + MSTB LTR MaLR 1 426 0 2402 241 97 42 chr2 156919958 156920657 -96335926 + L1MEc LINE L1 3600 4591 -1791 287 97 0 166 chr2 156921045 156921061 -96335522 + L1M2 LINE L1 5724 5741 -569 914 125 0 12 chr2 156921061 156921221 -96335362 - L1MA5 LINE L1 0 6300 6143 287 97 0 166 chr2 156921221 156921250 -96335333 + L1M2 LINE L1 5741 5773 -537 1850 156 19 36 chr2 156921250 156921558 -96335025 + AluJo SINE Alu 1 303 -9 287 97 0 166 chr2 156921558 156921618 -96334965 + L1M2 LINE L1 5773 5813 -497 1409 122 200 8 chr2 156921704 156921959 -96334624 + AluSg1 SINE Alu 1 304 -5 36 53 0 0 chr2 156923921 156923978 -96332605 + AT_rich Low_complexity Low_complexity 1 57 0 299 237 141 7 chr2 156924103 156924238 -96332345 - L1ME3A LINE L1 0 6170 6018 2367 72 16 0 chr2 156924611 156924916 -96331667 + AluY SINE Alu 1 310 -1 1351 335 101 16 chr2 156925692 156926547 -96330036 + L2 LINE L2 1913 2839 -475 1520 200 7 7 chr2 156926596 156926876 -96329707 + AluJo SINE Alu 1 280 -32 482 287 173 5 chr2 156927191 156927393 -96329190 + MIR SINE MIR 21 256 -6 21 0 0 0 chr2 156927633 156927654 -96328929 + AT_rich Low_complexity Low_complexity 1 21 0 365 213 37 96 chr2 156927931 156928067 -96328516 - MER94 DNA DNA -1 133 6 1637 191 10 27 chr2 156928128 156928426 -96328157 + AluJo SINE Alu 1 293 -19 2394 97 0 0 chr2 156928426 156928737 -96327846 + AluY SINE Alu 1 311 0 4548 140 49 6 chr2 156929160 156929997 -96326586 + L1MC2 LINE L1 5347 6219 -125 658 280 65 0 chr2 156930040 156930208 -96326375 - MIR SINE MIR -75 187 9 194 311 22 11 chr2 156930582 156930672 -96325911 + L2 LINE L2 3167 3257 -56 310 290 137 8 chr2 156930820 156930951 -96325632 - MARNA DNA Mariner -423 163 16 354 287 0 40 chr2 156931062 156931163 -96325420 - L2 LINE L2 0 3272 3176 1690 173 20 23 chr2 156931719 156932020 -96324563 - AluJo SINE Alu -12 300 1 244 286 0 0 chr2 156932372 156932435 -96324148 - MLT1I LTR MaLR 0 409 347 242 167 153 0 chr2 156933972 156934044 -96322539 + L1MB2 LINE L1 5529 5611 -510 1050 95 14 14 chr2 156934057 156934205 -96322378 + BC200 scRNA scRNA 6 153 -47 21 0 0 0 chr2 156935303 156935324 -96321259 + AT_rich Low_complexity Low_complexity 1 21 0 687 264 226 20 chr2 156936944 156937431 -96319152 + L2 LINE L2 2722 3312 -1 286 296 15 15 chr2 156937645 156937780 -96318803 + L1MC5 LINE L1 7783 7917 -44 1910 124 84 27 chr2 156938983 156939354 -96317229 + L1MB3 LINE L1 5293 5835 -348 * 5240 98 18 9 chr2 156939309 156940158 -96316425 + L1PB2 LINE L1 5293 6148 -3 1824 166 22 8 chr2 156940162 156940524 -96316059 + L1MB2 LINE L1 5798 6164 -7 432 319 0 7 chr2 156941111 156941255 -96315328 + MER117 DNA MER1_type 1 143 -54 2184 107 7 0 chr2 156942464 156942754 -96313829 - AluSx SINE Alu -20 292 1 21 36 0 0 chr2 156943358 156943386 -96313197 + AT_rich Low_complexity Low_complexity 1 28 0 284 93 0 0 chr2 156943956 156943999 -96312584 + L1PA8 LINE L1 6123 6165 -7 420 55 0 0 chr2 156944503 156944558 -96312025 + (CA)n Simple_repeat Simple_repeat 1 55 0 262 192 19 0 chr2 156946186 156946238 -96310345 + MIR SINE MIR 94 146 -62 183 305 102 0 chr2 156946854 156946913 -96309670 - MIR3 SINE MIR -24 184 120 473 272 92 16 chr2 156947123 156947307 -96309276 - LTR67 LTR ERVL -8 549 352 2066 210 86 20 chr2 156947428 156948032 -96308551 + LTR48B LTR ERV1 1 644 0 220 351 64 43 chr2 156948465 156948559 -96308024 - L2 LINE L2 -22 3250 3155 371 298 18 9 chr2 156948794 156948908 -96307675 - MIR SINE MIR -19 243 129 189 258 16 48 chr2 156948974 156949036 -96307547 - L2 LINE L2 -323 2949 2890 964 200 17 0 chr2 156950953 156951133 -96305450 - MER5A DNA MER1_type 0 189 7 469 270 27 27 chr2 156951220 156951368 -96305215 + MER5B DNA MER1_type 1 148 -30 1342 162 76 3 chr2 156951696 156952010 -96304573 - MSTA LTR MaLR 0 428 1 24 0 0 0 chr2 156953875 156953899 -96302684 + AT_rich Low_complexity Low_complexity 1 24 0 4881 106 25 15 chr2 156953931 156954737 -96301846 - Tigger3b DNA MER2_type -2 1229 416 1690 152 36 39 chr2 156954734 156955023 -96301560 - Tigger3b DNA MER2_type -2666 362 73 * 2358 92 0 0 chr2 156955023 156955318 -96301265 - AluSc SINE Alu -14 295 1 1690 152 36 39 chr2 156955318 156955391 -96301192 - Tigger3b DNA MER2_type -2955 73 1 876 246 101 4 chr2 156955391 156955667 -96300916 - L1MA9 LINE L1 -77 6235 5933 2314 116 0 0 chr2 156956026 156956329 -96300254 - AluSx SINE Alu -9 303 1 2085 112 17 0 chr2 156956701 156956988 -96299595 + AluSx SINE Alu 4 295 -17 740 225 92 17 chr2 156957450 156957623 -96298960 - MER5A DNA MER1_type 0 189 4 260 324 75 12 chr2 156958084 156958257 -96298326 - MLT1L LTR MaLR -73 542 359 374 291 167 24 chr2 156959146 156959356 -96297227 + MIR SINE MIR 2 241 -21 209 342 108 0 chr2 156960130 156960250 -96296333 + L2 LINE L2 3181 3313 0 279 54 0 0 chr2 156961147 156961184 -96295399 + (TC)n Simple_repeat Simple_repeat 2 38 0 526 238 16 0 chr2 156961382 156961508 -96295075 + LTR67 LTR ERVL 426 553 -4 290 233 23 47 chr2 156961638 156961724 -96294859 - MIR SINE MIR -88 120 37 1779 161 4 11 chr2 156961736 156962016 -96294567 - AluJo SINE Alu -22 290 13 2367 82 3 7 chr2 156963116 156963422 -96293161 + AluSq SINE Alu 1 305 -8 469 270 45 0 chr2 156963719 156963830 -96292753 - L2 LINE L2 -8 3305 3190 255 375 91 0 chr2 156963832 156963920 -96292663 + L2 LINE L2 3137 3232 -40 286 160 60 0 chr2 156964106 156964156 -96292427 - L2 LINE L2 -5 3267 3215 72 47 0 0 chr2 156964622 156964729 -96291854 + AT_rich Low_complexity Low_complexity 1 107 0 2207 103 0 13 chr2 156964896 156965197 -96291386 + AluSg SINE Alu 1 297 -13 1466 176 7 4 chr2 156965213 156965485 -96291098 + L1MC1 LINE L1 6061 6333 0 22 0 0 0 chr2 156966728 156966750 -96289833 + AT_rich Low_complexity Low_complexity 1 22 0 399 227 75 2 chr2 156968181 156968321 -96288262 + L1ME1 LINE L1 6006 6154 -10 295 317 25 33 chr2 156969857 156969977 -96286606 - MIR SINE MIR -97 165 47 2099 104 0 23 chr2 156970076 156970384 -96286199 + AluSx SINE Alu 1 301 -11 225 0 0 0 chr2 156971141 156971166 -96285417 + (A)n Simple_repeat Simple_repeat 1 25 0 993 200 0 0 chr2 156971170 156971340 -96285243 + MIR SINE MIR 20 189 -73 309 259 198 19 chr2 156971340 156971502 -96285081 + L1MC5 LINE L1 7663 7853 -108 1083 175 0 26 chr2 156971508 156971702 -96284881 + AluJb SINE Alu 120 308 -4 28 71 0 0 chr2 156971761 156971817 -96284766 + AT_rich Low_complexity Low_complexity 1 56 0 391 275 62 31 chr2 156972153 156972282 -96284301 - MIR SINE MIR 0 262 126 2217 93 0 10 chr2 156972282 156972573 -96284010 - AluSg SINE Alu -7 303 16 391 275 62 31 chr2 156972573 156972603 -96283980 - MIR SINE MIR -136 126 98 193 274 43 51 chr2 156972693 156972810 -96283773 - MIR SINE MIR -142 120 5 * 242 284 90 4 chr2 156972809 156972900 -96283683 + MIR SINE MIR 42 135 -86 753 210 17 33 chr2 156973077 156973258 -96283325 + MER5B DNA MER1_type 1 178 0 321 26 0 0 chr2 156973594 156973632 -96282951 + (CA)n Simple_repeat Simple_repeat 1 38 0 2794 19 0 0 chr2 156974435 156974749 -96281834 + AluYb8 SINE Alu 1 314 -4 1034 179 0 6 chr2 156974776 156974944 -96281639 + FAM SINE Alu 1 167 -8 395 339 31 0 chr2 156976077 156976207 -96280376 - MIR3 SINE MIR -39 169 36 332 244 0 0 chr2 156976753 156976831 -96279752 - MER63A DNA MER1_type 0 210 133 1829 196 38 0 chr2 156976896 156977263 -96279320 - MER70A LTR ERVL 0 472 92 677 215 6 31 chr2 156977264 156977427 -96279156 - MER70B LTR ERVL -419 159 1 300 53 0 0 chr2 156977559 156977597 -96278986 + (A)n Simple_repeat Simple_repeat 1 38 0 312 182 11 57 chr2 156979382 156979470 -96277113 - L1ME4a LINE L1 -11 6110 6027 288 103 29 15 chr2 156979546 156979614 -96276969 + (TG)n Simple_repeat Simple_repeat 1 69 0 1436 159 42 4 chr2 156979644 156979908 -96276675 - LTR32 LTR ERVL 0 471 198 333 226 52 61 chr2 156981228 156981343 -96275240 + L2 LINE L2 1559 1672 -1642 324 48 0 0 chr2 156981423 156981465 -96275118 + (CA)n Simple_repeat Simple_repeat 2 43 0 2360 93 54 25 chr2 156981882 156982236 -96274347 - THE1B LTR MaLR 0 364 1 2202 125 0 3 chr2 156983605 156983908 -96272675 + AluSx SINE Alu 1 302 -10 28 48 0 0 chr2 156984217 156984259 -96272324 + AT_rich Low_complexity Low_complexity 1 42 0 21 36 0 0 chr2 156984357 156984385 -96272198 + AT_rich Low_complexity Low_complexity 1 28 0 252 0 0 0 chr2 156985500 156985528 -96271055 + (A)n Simple_repeat Simple_repeat 1 28 0 27 29 0 0 chr2 156985564 156985598 -96270985 + AT_rich Low_complexity Low_complexity 1 34 0 180 0 0 0 chr2 156985856 156985876 -96270707 + (TTTTTG)n Simple_repeat Simple_repeat 4 23 0 285 286 141 90 chr2 156986169 156986424 -96270159 - L2 LINE L2 -179 3093 2826 254 0 0 0 chr2 156986489 156986519 -96270064 + MLT2B2 LTR ERVL 474 503 -12 367 341 95 0 chr2 156986544 156986670 -96269913 - L2 LINE L2 -556 2758 2621 1027 218 42 51 chr2 156986672 156987133 -96269450 + MLT2D LTR ERVL 1 464 0 183 353 0 0 chr2 156987142 156987193 -96269390 - L2 LINE L2 -704 2610 2560 417 330 109 53 chr2 156987399 156987775 -96268808 - L2 LINE L2 -842 2472 2076 421 196 34 28 chr2 156987828 156987957 -96268626 - LTR40c LTR ERVL -71 394 279 26 0 0 0 chr2 156990622 156990648 -96265935 + AT_rich Low_complexity Low_complexity 1 26 0 1431 98 0 5 chr2 156990737 156990930 -96265653 + AluSq SINE Alu 122 313 0 2414 58 0 7 chr2 156992057 156992349 -96264234 + AluY SINE Alu 10 299 -12 1454 143 29 6 chr2 156992485 156992959 -96263624 - LTR24B LTR ERV1 -7 569 1 424 278 127 47 chr2 156993247 156993334 -96263249 + L1M4 LINE L1 3794 3873 -2273 1535 129 0 0 chr2 156993334 156993543 -96263040 + AluSx SINE Alu 1 209 -103 424 278 127 47 chr2 156993543 156993754 -96262829 + L1M4 LINE L1 3873 4116 -2030 2136 104 10 0 chr2 156993872 156994160 -96262423 + AluSp SINE Alu 3 293 -20 2334 55 3 0 chr2 156994251 156994544 -96262039 - L1PA6 LINE L1 -11 6143 5850 4318 152 39 0 chr2 156995043 156995847 -96260736 + L1MC3 LINE L1 6944 7778 -7 2251 128 0 0 chr2 156995888 156996200 -96260383 - AluSx SINE Alu 0 312 1 2557 261 112 64 chr2 156996289 156996876 -96259707 - HAL1 LINE L1 -892 1615 1057 2206 121 3 0 chr2 156996876 156997183 -96259400 - AluSx SINE Alu -4 308 1 2557 261 112 64 chr2 156997183 156997346 -96259237 - HAL1 LINE L1 -1450 1057 903 1766 143 59 14 chr2 156997346 156997703 -96258880 + L1MB2 LINE L1 5795 6167 -4 2557 261 112 64 chr2 156997703 156998413 -96258170 - HAL1 LINE L1 -1604 903 85 2014 127 0 39 chr2 156998433 156998740 -96257843 + AluSx SINE Alu 1 295 -17 405 296 145 12 chr2 156998878 156999050 -96257533 + MIR SINE MIR 12 206 -56 23 0 0 0 chr2 156999325 156999348 -96257235 + AT_rich Low_complexity Low_complexity 1 23 0 211 194 65 32 chr2 156999502 156999564 -96257019 - L3b LINE CR1 -258 1325 1262 566 256 0 51 chr2 156999695 156999871 -96256712 - L2 LINE L2 -1 3312 3146 2130 111 3 0 chr2 157000558 157000846 -96255737 + AluSx SINE Alu 1 289 -23 1846 153 0 16 chr2 157001406 157001726 -96254857 - MER50 LTR ERV1 -23 711 397 1261 155 32 16 chr2 157001713 157001964 -96254619 - MER50 LTR ERV1 -479 255 1 * 601 173 0 118 chr2 157002047 157002286 -96254297 + L1MC4 LINE L1 6572 6703 -1258 491 296 40 0 chr2 157002459 157002635 -96253948 + L1MC4 LINE L1 6796 6978 -1064 440 324 72 7 chr2 157002889 157003303 -96253280 - L1M4 LINE L1 -1549 4597 4157 225 221 29 29 chr2 157003770 157003838 -96252745 - L1M4 LINE L1 -2100 4046 3979 1888 151 3 17 chr2 157003975 157004273 -96252310 - AluJo SINE Alu -18 294 1 231 274 41 0 chr2 157004389 157004462 -96252121 - MER2 DNA MER2_type 0 345 270 1256 143 5 0 chr2 157004492 157004701 -96251882 - MER2 DNA MER2_type -134 211 2 425 333 65 4 chr2 157004726 157004972 -96251611 - L1M4 LINE L1 -2591 3555 3295 574 282 58 11 chr2 157005047 157005324 -96251259 - HAL1 LINE L1 -832 1675 1386 292 253 21 0 chr2 157005523 157005618 -96250965 + L1ME2 LINE L1 4266 4362 -1784 22 0 0 0 chr2 157005658 157005680 -96250903 + AT_rich Low_complexity Low_complexity 1 22 0 1958 162 0 3 chr2 157005686 157005983 -96250600 + AluJb SINE Alu 1 296 -16 1718 211 35 2 chr2 157005983 157006407 -96250176 + L1ME2 LINE L1 5483 5923 -247 2267 99 13 71 chr2 157006407 157006473 -96250110 - L1PB1 LINE L1 0 6151 6083 2266 82 7 26 chr2 157006473 157006777 -96249806 - AluSp SINE Alu -15 298 1 2267 99 13 71 chr2 157006777 157007103 -96249480 - L1PB1 LINE L1 -68 6083 5782 201 195 0 0 chr2 157007112 157007153 -96249430 + (TATATG)n Simple_repeat Simple_repeat 3 43 0 376 250 153 22 chr2 157007153 157007309 -96249274 + L1ME2 LINE L1 5901 6098 -66 1737 211 46 102 chr2 157007309 157007896 -96248687 + MLT2B3 LTR ERVL 1 554 0 376 250 153 22 chr2 157007896 157007967 -96248616 + L1ME2 LINE L1 6098 6158 -6 2141 118 0 0 chr2 157008019 157008315 -96248268 - AluSx SINE Alu -16 296 1 456 378 103 24 chr2 157008714 157008839 -96247744 - L1MEd LINE L1 -5510 609 495 1880 141 6 59 chr2 157008839 157009159 -96247424 - AluSx SINE Alu -9 303 1 456 378 103 24 chr2 157009159 157009374 -96247209 - L1MEd LINE L1 -5624 495 242 28 61 0 0 chr2 157009600 157009649 -96246934 + AT_rich Low_complexity Low_complexity 1 49 0 233 243 43 0 chr2 157009652 157009722 -96246861 - MLT1K LTR MaLR -34 554 482 2353 38 14 10 chr2 157010167 157010458 -96246125 + AluY SINE Alu 1 292 -19 248 253 121 11 chr2 157010468 157010559 -96246024 - L3 LINE CR1 -705 872 772 861 39 0 0 chr2 157011374 157011477 -96245106 + AluY SINE Alu 133 235 -76 25 83 0 0 chr2 157011477 157011537 -96245046 + AT_rich Low_complexity Low_complexity 1 60 0 326 74 19 0 chr2 157011702 157011756 -96244827 + (TG)n Simple_repeat Simple_repeat 2 56 0 200 292 0 0 chr2 157013547 157013595 -96242988 + MIR SINE MIR 182 229 -33 1173 190 40 6 chr2 157014591 157015016 -96241567 + MLT1D LTR MaLR 1 505 0 12182 199 22 20 chr2 157015055 157017902 -96238681 + L1PA15 LINE L1 2626 5491 -674 2339 105 0 10 chr2 157017902 157018208 -96238375 + AluSx SINE Alu 1 303 -9 12182 199 22 20 chr2 157018208 157018868 -96237715 + L1PA15 LINE L1 5491 6148 -17 1588 197 23 74 chr2 157019351 157019782 -96236801 + MLT1D-int LTR MaLR 963 1371 0 862 198 12 6 chr2 157019782 157019954 -96236629 + MLT1D LTR MaLR 1 173 -332 201 354 53 53 chr2 157020972 157021068 -96235515 - MIR SINE MIR -52 210 115 2537 62 0 0 chr2 157021068 157021374 -96235209 + AluY SINE Alu 1 306 -5 201 354 53 53 chr2 157021374 157021486 -96235097 - MIR SINE MIR -146 116 2 253 183 183 56 chr2 157022513 157022639 -96233944 - L1MC5 LINE L1 -30 7931 7790 930 157 0 0 chr2 157022713 157022853 -96233730 - FLAM_C SINE Alu -3 140 1 314 256 47 35 chr2 157022858 157023030 -96233553 - L1MC5 LINE L1 -280 7681 7508 1665 110 67 53 chr2 157023938 157024237 -96232346 + AluJb SINE Alu 1 303 -9 2124 121 7 7 chr2 157025403 157025700 -96230883 + AluSx SINE Alu 1 297 -15 1485 226 9 3 chr2 157025819 157026138 -96230445 + MER82 DNA MER2_type 25 345 -308 1082 177 0 21 chr2 157026144 157026330 -96230253 + AluJo SINE Alu 40 221 -91 2259 87 59 0 chr2 157026609 157026897 -96229686 + AluSq SINE Alu 2 306 -7 1166 161 0 76 chr2 157026899 157027135 -96229448 - AluJo SINE Alu -94 218 1 292 167 0 17 chr2 157027136 157027196 -96229387 - MER82 DNA MER2_type -256 397 339 423 183 0 0 chr2 157027203 157027285 -96229298 + AluJo SINE Alu 224 305 -7 547 223 295 0 chr2 157027286 157027479 -96229104 + MER82 DNA MER2_type 396 645 -8 201 259 0 0 chr2 157027804 157027862 -96228721 + A-rich Low_complexity Low_complexity 1 58 0 1407 118 31 4 chr2 157027924 157028358 -96228225 + LTR54 LTR ERV1 5 510 0 282 278 210 37 chr2 157028976 157029011 -96227572 - MIR SINE MIR -71 191 163 4247 70 13 0 chr2 157029011 157029558 -96227025 - MER41A LTR ERV1 0 554 1 282 278 210 37 chr2 157029558 157029684 -96226899 - MIR SINE MIR -99 163 2 5829 52 28 0 chr2 157029753 157030498 -96226085 - MER4E LTR ERV1 0 766 1 57 28 0 0 chr2 157030657 157030728 -96225855 + AT_rich Low_complexity Low_complexity 1 71 0 184 298 71 24 chr2 157030817 157030901 -96225682 - L2 LINE L2 -650 2664 2577 2000 93 4 0 chr2 157030993 157031252 -96225331 + AluSx SINE Alu 40 299 -13 1247 137 0 0 chr2 157031255 157031430 -96225153 + AluSq SINE Alu 133 307 -6 1843 171 122 109 chr2 157031598 157031912 -96224671 - LTR57-int LTR ERVL -3763 1580 693 2223 181 66 18 chr2 157031912 157032475 -96224108 - MER65-int LTR ERV1 -2721 2150 1561 641 215 51 46 chr2 157032539 157032776 -96223807 - MER34 LTR ERV1 -271 271 34 180 77 0 0 chr2 157032898 157032924 -96223659 + (TTTTTG)n Simple_repeat Simple_repeat 4 29 0 298 115 0 58 chr2 157033038 157033090 -96223493 - LTR57-int LTR ERVL -4992 351 303 2029 179 62 34 chr2 157033571 157033719 -96222864 - MER65C LTR ERV1 0 461 319 2475 67 3 22 chr2 157033719 157034032 -96222551 - AluY SINE Alu -4 307 1 2029 179 62 34 chr2 157034032 157034331 -96222252 - MER65C LTR ERV1 -142 319 1 2396 70 0 10 chr2 157034665 157034966 -96221617 + AluY SINE Alu 2 299 -12 336 411 38 0 chr2 157035008 157035217 -96221366 + MIR SINE MIR 31 247 -15 1795 157 29 0 chr2 157036590 157036870 -96219713 + AluJo SINE Alu 1 288 -24 22 0 0 0 chr2 157037250 157037272 -96219311 + AT_rich Low_complexity Low_complexity 1 22 0 1080 261 182 57 chr2 157037505 157038627 -96217956 + L2 LINE L2 2013 3311 -2 315 49 0 0 chr2 157038637 157038678 -96217905 + (TC)n Simple_repeat Simple_repeat 2 42 0 21 0 0 0 chr2 157039453 157039474 -96217109 + AT_rich Low_complexity Low_complexity 1 21 0 2236 108 0 10 chr2 157039482 157039777 -96216806 + AluSx SINE Alu 1 292 -20 25 31 0 0 chr2 157039807 157039839 -96216744 + AT_rich Low_complexity Low_complexity 1 32 0 285 278 24 41 chr2 157040140 157040309 -96216274 + L1MC4a LINE L1 4860 5025 -1121 2209 121 3 0 chr2 157040312 157040610 -96215973 - AluSx SINE Alu -13 299 1 31 0 0 0 chr2 157040708 157040739 -96215844 + AT_rich Low_complexity Low_complexity 1 31 0 2043 118 14 0 chr2 157040897 157041185 -96215398 + AluSq SINE Alu 12 303 -10 348 43 0 0 chr2 157041656 157041702 -96214881 + (CA)n Simple_repeat Simple_repeat 1 46 0 2314 79 0 3 chr2 157041759 157042051 -96214532 + AluSp SINE Alu 1 291 -22 2290 97 7 3 chr2 157042137 157042447 -96214136 + AluSq SINE Alu 1 311 -2 21 36 0 0 chr2 157042721 157042749 -96213834 + AT_rich Low_complexity Low_complexity 1 28 0 1919 141 0 17 chr2 157042763 157043062 -96213521 + AluJb SINE Alu 1 294 -18 2061 118 29 13 chr2 157043210 157043516 -96213067 + AluSx SINE Alu 1 311 -1 2022 129 24 0 chr2 157043713 157044008 -96212575 + AluSx SINE Alu 1 302 -10 1944 99 0 28 chr2 157044174 157044207 -96212376 - AluSg SINE Alu -1 309 277 185 0 40 0 chr2 157044207 157044232 -96212351 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1944 99 0 28 chr2 157044232 157044480 -96212103 - AluSg SINE Alu -33 277 36 1588 124 136 0 chr2 157044481 157044739 -96211844 - AluSx SINE Alu -8 294 2 384 296 124 75 chr2 157047347 157047800 -96208783 + L1MC4a LINE L1 5351 5825 -1983 1981 120 27 3 chr2 157047802 157048094 -96208489 + AluSx SINE Alu 5 303 -9 267 198 386 0 chr2 157048107 157048208 -96208375 + L2 LINE L2 2215 2354 -960 191 290 335 19 chr2 157048258 157048862 -96207721 + L2 LINE L2 2214 3030 -283 1133 67 0 0 chr2 157048862 157049011 -96207572 + LTR3b LTR ERVK 7 155 -282 2227 96 0 10 chr2 157049495 157049798 -96206785 + AluSc SINE Alu 1 300 -9 272 264 95 85 chr2 157050004 157050299 -96206284 + L1ME LINE L1 5528 5825 -296 898 294 37 17 chr2 157050445 157050795 -96205788 + MLT1I LTR MaLR 4 360 -49 36 0 0 0 chr2 157050801 157050837 -96205746 + AT_rich Low_complexity Low_complexity 1 36 0 646 130 0 0 chr2 157051857 157051957 -96204626 + AluSg/x SINE Alu 203 302 -7 851 176 0 0 chr2 157052500 157052631 -96203952 - AluSq/x SINE Alu -182 131 1 614 285 85 20 chr2 157052635 157052942 -96203641 + MLT1I LTR MaLR 82 407 -2 2302 87 30 0 chr2 157053847 157054145 -96202438 - AluSx SINE Alu -5 307 1 201 307 67 0 chr2 157054253 157054328 -96202255 + L2 LINE L2 3141 3220 -52 317 345 24 33 chr2 157055314 157055649 -96200934 - L2 LINE L2 -540 2774 2353 4286 146 6 16 chr2 157056780 157057472 -96199111 + L1MB3 LINE L1 5499 6183 0 701 284 76 0 chr2 157057477 157057674 -96198909 + MIR SINE MIR 20 231 -31 203 61 30 0 chr2 157057847 157057880 -96198703 + (TTTTA)n Simple_repeat Simple_repeat 3 36 0 2057 125 3 0 chr2 157057883 157058171 -96198412 - AluSx SINE Alu -23 289 1 2434 103 0 0 chr2 157058410 157058722 -96197861 + AluSx SINE Alu 1 312 0 2371 77 0 7 chr2 157058828 157059125 -96197458 - AluSg SINE Alu -15 295 1 1139 131 0 12 chr2 157059224 157059392 -96197191 - AluJb SINE Alu -8 304 139 1879 92 0 4 chr2 157059392 157059632 -96196951 - AluSq SINE Alu -74 239 1 21 36 0 0 chr2 157060297 157060325 -96196258 + AT_rich Low_complexity Low_complexity 1 28 0 1561 183 3 21 chr2 157060422 157060707 -96195876 - AluJo SINE Alu -32 280 1 339 274 145 8 chr2 157062261 157062378 -96194205 + MIR SINE MIR 10 142 -66 439 354 71 0 chr2 157062392 157062590 -96193993 - MIR SINE MIR -3 259 48 362 226 95 28 chr2 157062910 157063096 -96193487 + MIR SINE MIR 15 207 -55 2000 110 21 25 chr2 157063821 157064125 -96192458 - AluSc SINE Alu 0 303 1 2225 102 3 0 chr2 157064273 157064556 -96192027 + AluSq SINE Alu 11 294 -19 247 330 82 33 chr2 157064877 157065059 -96191524 + MIR3 SINE MIR 12 202 -6 2107 107 7 0 chr2 157065198 157065487 -96191096 - AluSg1 SINE Alu -18 291 1 1458 258 84 7 chr2 157065765 157066195 -96190388 - L1ME3A LINE L1 -10 6160 5698 195 69 0 0 chr2 157066787 157066816 -96189767 + (TTG)n Simple_repeat Simple_repeat 2 30 0 203 278 0 0 chr2 157066870 157066924 -96189659 + MIR SINE MIR 77 130 -132 23 0 0 0 chr2 157067174 157067197 -96189386 + AT_rich Low_complexity Low_complexity 1 23 0 27 0 0 0 chr2 157067305 157067332 -96189251 + AT_rich Low_complexity Low_complexity 1 27 0 2215 104 10 3 chr2 157067490 157067788 -96188795 - AluSx SINE Alu -12 300 1 1490 176 82 15 chr2 157068095 157068424 -96188159 + Charlie4a DNA MER1_type 40 390 -118 1334 82 0 18 chr2 157068425 157068595 -96187988 + AluSg SINE Alu 1 167 -143 597 153 13 127 chr2 157068598 157068655 -96187928 + Charlie4a DNA MER1_type 370 432 -1529 1754 148 35 7 chr2 157068655 157068938 -96187645 - AluJb SINE Alu -21 291 1 597 153 13 127 chr2 157068938 157069037 -96187546 + Charlie4a DNA MER1_type 432 508 0 1220 140 11 72 chr2 157069300 157069564 -96187019 + L1MC3 LINE L1 6710 6957 -828 623 196 56 7 chr2 157069532 157069675 -96186908 + L1MC4 LINE L1 6450 6599 -1443 * 540 45 0 0 chr2 157069706 157069773 -96186810 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 1269 112 0 0 chr2 157069787 157069956 -96186627 + AluSg/x SINE Alu 133 301 -11 1925 199 15 18 chr2 157069966 157070357 -96186226 + L1MC4 LINE L1 6671 7060 -982 2447 235 53 19 chr2 157070366 157070792 -96185791 + L1MC4 LINE L1 7239 7696 -346 1860 205 173 18 chr2 157070792 157071347 -96185236 + LTR48B LTR ERV1 4 644 0 2447 235 53 19 chr2 157071347 157071562 -96185021 + L1MC4 LINE L1 7696 7902 -140 180 77 0 0 chr2 157071616 157071642 -96184941 + (TA)n Simple_repeat Simple_repeat 2 27 0 270 136 0 0 chr2 157071669 157071713 -96184870 + (CA)n Simple_repeat Simple_repeat 1 44 0 1798 183 53 91 chr2 157072460 157072903 -96183680 + MLT1D LTR MaLR 1 422 -83 252 59 0 0 chr2 157072903 157072937 -96183646 + (TG)n Simple_repeat Simple_repeat 1 34 0 1798 183 53 91 chr2 157072937 157073018 -96183565 + MLT1D LTR MaLR 422 505 0 2621 25 0 32 chr2 157073311 157073626 -96182957 + AluY SINE Alu 1 305 -6 730 204 183 50 chr2 157074958 157075198 -96181385 - AluSx SINE Alu -6 306 35 360 192 123 0 chr2 157075738 157075811 -96180772 - MIR SINE MIR -111 151 70 481 230 11 115 chr2 157075881 157076055 -96180528 - MER103 DNA DNA 0 166 11 180 0 0 0 chr2 157076330 157076350 -96180233 + (CA)n Simple_repeat Simple_repeat 2 21 0 206 247 75 96 chr2 157076410 157076547 -96180036 - L2 LINE L2 -188 3084 2949 2049 185 17 6 chr2 157076547 157076904 -96179679 + MLT1A1 LTR MaLR 1 361 -4 823 213 18 6 chr2 157077244 157077413 -96179170 + FRAM SINE Alu 1 168 -8 223 281 256 0 chr2 157077455 157077576 -96179007 + MIR SINE MIR 98 249 -13 23 0 0 0 chr2 157077917 157077940 -96178643 + AT_rich Low_complexity Low_complexity 1 23 0 2256 90 33 0 chr2 157078586 157078765 -96177818 - AluY SINE Alu 0 311 117 268 24 24 24 chr2 157078765 157078807 -96177776 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 2256 90 33 0 chr2 157078807 157078928 -96177655 - AluY SINE Alu -194 117 1 2657 36 0 3 chr2 157079153 157079458 -96177125 + AluY SINE Alu 1 304 -7 1573 147 18 42 chr2 157079585 157079870 -96176713 - AluJb SINE Alu -26 286 9 358 248 233 0 chr2 157080040 157080173 -96176410 - MER5A DNA MER1_type 0 189 26 7433 110 161 67 chr2 157080176 157081726 -96174857 + pTR5 LTR ERV1 743 2438 0 1575 209 87 22 chr2 157081917 157082333 -96174250 - LTR47B LTR ERVL 0 443 1 227 324 10 49 chr2 157082977 157083079 -96173504 + MIR3 SINE MIR 1 98 -110 339 200 17 70 chr2 157083157 157083272 -96173311 + MIR SINE MIR 112 220 -42 31 0 0 0 chr2 157083278 157083309 -96173274 + AT_rich Low_complexity Low_complexity 1 31 0 2613 51 0 3 chr2 157083634 157083945 -96172638 - AluY SINE Alu -1 310 1 2025 173 2 2 chr2 157085249 157085719 -96170864 + MLT2B1 LTR ERVL 1 519 -1 2435 113 43 61 chr2 157086041 157086482 -96170101 + L1MA4A LINE L1 5866 6298 -5 2340 91 0 7 chr2 157087828 157088125 -96168458 - AluSc SINE Alu -12 297 3 2415 131 18 59 chr2 157088632 157088923 -96167660 + L1MB3 LINE L1 5758 6026 -157 2352 96 0 10 chr2 157088923 157089237 -96167346 - AluSq SINE Alu -2 311 1 2415 131 18 59 chr2 157089237 157089388 -96167195 + L1MB3 LINE L1 6026 6182 -1 522 214 0 19 chr2 157089655 157089809 -96166774 + GA-rich Low_complexity Low_complexity 2 152 0 327 214 43 0 chr2 157090004 157090074 -96166509 - L3 LINE CR1 -7 1570 1498 27 49 0 0 chr2 157090233 157090274 -96166309 + AT_rich Low_complexity Low_complexity 1 41 0 327 49 0 0 chr2 157090328 157090369 -96166214 + (TG)n Simple_repeat Simple_repeat 2 42 0 22 35 0 0 chr2 157090467 157090496 -96166087 + AT_rich Low_complexity Low_complexity 1 29 0 1691 167 51 20 chr2 157090672 157090966 -96165617 + AluJb SINE Alu 1 303 -9 198 299 37 84 chr2 157091126 157091233 -96165350 - L2 LINE L2 -15 3257 3156 967 288 130 36 chr2 157091744 157092506 -96164077 + L2 LINE L2 2460 3310 -3 2332 116 0 0 chr2 157092637 157092947 -96163636 + AluSx SINE Alu 1 310 -2 1234 190 8 0 chr2 157093170 157093417 -96163166 + L1PB1 LINE L1 6 254 -6609 1363 170 146 56 chr2 157093417 157093828 -96162755 + LTR7 LTR ERV1 1 448 -2 2808 127 9 24 chr2 157093832 157094298 -96162285 + HERVH LTR ERV1 1 459 -7254 13516 124 12 36 chr2 157094356 157096607 -96159976 + HERVH LTR ERV1 800 2995 -4718 5566 133 21 8 chr2 157096586 157098322 -96158261 + HERVH LTR ERV1 3140 4834 -2228 * 1553 171 4 0 chr2 157098350 157098619 -96157964 + HERVH LTR ERV1 5747 6016 -1697 * 2853 106 93 54 chr2 157098612 157099148 -96157435 + HERVH LTR ERV1 7157 7713 0 1261 169 139 85 chr2 157099148 157099573 -96157010 + LTR7 LTR ERV1 1 448 -2 15773 188 18 11 chr2 157099577 157100957 -96155626 + L1PB1 LINE L1 250 1618 -5249 2158 115 0 13 chr2 157100957 157101261 -96155322 + AluSq SINE Alu 1 300 -13 15773 188 18 11 chr2 157101261 157101274 -96155309 + L1PB1 LINE L1 1618 1629 -5238 2080 122 0 10 chr2 157101274 157101570 -96155013 + AluSq SINE Alu 1 293 -20 15773 188 18 11 chr2 157101570 157105375 -96151208 + L1PB1 LINE L1 1629 5762 -1105 2412 101 0 0 chr2 157105375 157105683 -96150900 + AluSg SINE Alu 1 308 -2 15773 188 18 11 chr2 157105683 157106793 -96149790 + L1PB1 LINE L1 5762 6862 -5 445 310 60 23 chr2 157107076 157107292 -96149291 - L2 LINE L2 -834 2480 2257 2411 81 0 3 chr2 157107348 157107644 -96148939 + AluSg SINE Alu 1 295 -15 2347 86 7 0 chr2 157107812 157108115 -96148468 + AluSp SINE Alu 1 305 -8 251 314 0 0 chr2 157108168 157108238 -96148345 + (TAA)n Simple_repeat Simple_repeat 2 71 0 475 317 130 5 chr2 157108257 157108465 -96148118 - MIR SINE MIR -28 234 1 471 232 125 37 chr2 157108701 157109029 -96147554 + L1MEc LINE L1 1864 2220 -4176 2355 97 0 6 chr2 157109055 157109366 -96147217 + AluSg SINE Alu 1 309 -1 1088 289 115 36 chr2 157109381 157109911 -96146672 - MLT1E LTR MaLR 0 593 22 319 236 29 53 chr2 157109932 157110139 -96146444 + L1ME2 LINE L1 5748 5991 -173 1090 174 85 40 chr2 157110149 157110415 -96146168 - MSTD LTR MaLR 0 396 52 2004 143 0 3 chr2 157110415 157110709 -96145874 - AluSg SINE Alu -17 293 1 1090 174 85 40 chr2 157110709 157110764 -96145819 - MSTD LTR MaLR -344 52 1 311 178 6 6 chr2 157110828 157110900 -96145683 + L1ME2 LINE L1 6087 6161 -5 22 56 0 0 chr2 157110900 157110936 -96145647 + AT_rich Low_complexity Low_complexity 1 36 0 27 29 0 0 chr2 157111378 157111412 -96145171 + AT_rich Low_complexity Low_complexity 1 34 0 24 32 0 0 chr2 157111492 157111523 -96145060 + AT_rich Low_complexity Low_complexity 1 31 0 1003 62 0 93 chr2 157111767 157111929 -96144654 + L1PA8 LINE L1 6026 6172 0 1795 176 0 3 chr2 157112185 157112480 -96144103 + AluJb SINE Alu 4 297 -15 860 309 63 50 chr2 157112484 157112578 -96144005 + HAL1 LINE L1 1 92 -2415 1585 167 60 30 chr2 157112578 157112711 -96143872 + AluJo SINE Alu 1 129 -183 189 0 0 0 chr2 157112711 157112732 -96143851 + (TTAA)n Simple_repeat Simple_repeat 2 22 0 1585 167 60 30 chr2 157112732 157112897 -96143686 + AluJo SINE Alu 129 308 -4 860 309 63 50 chr2 157112897 157112909 -96143674 + HAL1 LINE L1 92 102 -2405 2235 101 16 0 chr2 157112909 157113216 -96143367 + AluSx SINE Alu 1 312 0 860 309 63 50 chr2 157113216 157113805 -96142778 + HAL1 LINE L1 102 706 -1801 230 264 110 39 chr2 157113895 157114077 -96142506 + HAL1 LINE L1 841 1035 -1472 257 73 0 24 chr2 157114134 157114175 -96142408 + (GGAA)n Simple_repeat Simple_repeat 3 42 0 397 250 94 39 chr2 157114175 157114355 -96142228 + HAL1 LINE L1 1427 1616 -891 1255 243 52 38 chr2 157114359 157114882 -96141701 + HAL1 LINE L1 1950 2479 -28 22 0 0 0 chr2 157114887 157114909 -96141674 + AT_rich Low_complexity Low_complexity 1 22 0 516 147 28 9 chr2 157115063 157115172 -96141411 - L1MD1 LINE L1 0 6242 6132 1251 176 135 6 chr2 157115182 157115539 -96141044 - L1M4 LINE L1 -583 5591 5197 * 2228 215 57 7 chr2 157115538 157116487 -96140096 - L1MD1 LINE L1 -743 5403 4618 24 32 0 0 chr2 157116492 157116523 -96140060 + AT_rich Low_complexity Low_complexity 1 31 0 577 203 81 8 chr2 157116523 157116646 -96139937 + FLAM_C SINE Alu 1 132 -1 2130 119 0 14 chr2 157116899 157117032 -96139551 + AluSg SINE Alu 2 135 -175 2338 75 44 0 chr2 157117032 157117326 -96139257 + AluY SINE Alu 1 307 -4 2130 119 0 14 chr2 157117326 157117486 -96139097 + AluSg SINE Alu 135 291 -19 234 265 47 100 chr2 157117628 157118145 -96138438 + L1ME4a LINE L1 5539 6037 -84 2510 65 3 0 chr2 157119343 157119653 -96136930 + AluY SINE Alu 1 311 0 3074 267 114 22 chr2 157119847 157121317 -96135266 + HAL1 LINE L1 11 1615 -892 671 255 96 24 chr2 157121319 157121711 -96134872 - LTR33 LTR ERVL -2 519 45 1299 98 0 2 chr2 157121757 157122012 -96134571 + AluSq SINE Alu 1 299 -14 776 200 0 0 chr2 157122565 157122695 -96133888 + FLAM_C SINE Alu 1 130 -3 206 314 43 122 chr2 157122721 157122909 -96133674 - L2 LINE L2 -111 3161 2989 21 36 0 0 chr2 157123321 157123349 -96133234 + AT_rich Low_complexity Low_complexity 1 28 0 429 109 0 0 chr2 157123890 157123954 -96132629 + (TG)n Simple_repeat Simple_repeat 1 64 0 466 317 100 0 chr2 157124253 157124433 -96132150 - MIR SINE MIR -14 248 51 2452 51 0 0 chr2 157124614 157124909 -96131674 + AluY SINE Alu 1 295 -16 1853 179 0 7 chr2 157124967 157125269 -96131314 - AluJb SINE Alu -12 300 1 5997 107 3 0 chr2 157125289 157126379 -96130204 - L1PB1 LINE L1 -3 6148 5064 726 158 0 60 chr2 157126446 157126579 -96130004 + FLAM_C SINE Alu 1 125 -18 2263 89 3 0 chr2 157126741 157127032 -96129551 + AluY SINE Alu 1 292 -19 2462 87 0 0 chr2 157127048 157127348 -96129235 + AluSq SINE Alu 3 302 -11 21 0 0 0 chr2 157127527 157127548 -96129035 + AT_rich Low_complexity Low_complexity 1 21 0 1527 174 66 12 chr2 157127554 157127812 -96128771 - AluJb SINE Alu -36 276 5 2222 105 0 0 chr2 157127992 157128286 -96128297 + AluY SINE Alu 1 294 -17 1922 121 45 17 chr2 157128379 157128668 -96127915 + AluSx SINE Alu 1 297 -15 1006 147 13 13 chr2 157128726 157128882 -96127701 + AluJb SINE Alu 137 292 -20 21 0 0 0 chr2 157129830 157129851 -96126732 + AT_rich Low_complexity Low_complexity 1 21 0 2204 101 0 17 chr2 157129941 157130239 -96126344 + AluSx SINE Alu 1 293 -19 23 0 0 0 chr2 157130281 157130304 -96126279 + AT_rich Low_complexity Low_complexity 1 23 0 2111 123 0 23 chr2 157130309 157130609 -96125974 + AluJb SINE Alu 1 293 -19 299 325 74 48 chr2 157130891 157131122 -96125461 + L2 LINE L2 2740 2976 -338 318 343 79 7 chr2 157131427 157131567 -96125016 + MIR3 SINE MIR 36 185 -23 1854 123 60 27 chr2 157132051 157132385 -96124198 - THE1C LTR MaLR 0 375 31 306 281 103 74 chr2 157132927 157133130 -96123453 - L2 LINE L2 -1 3312 3104 572 239 3 31 chr2 157133133 157133297 -96123286 + L1ME1 LINE L1 6019 6334 0 1072 180 0 0 chr2 157133306 157133473 -96123110 + AluSg/x SINE Alu 130 296 -14 671 347 120 8 chr2 157133500 157133963 -96122620 - L2 LINE L2 -239 3074 2550 371 309 169 11 chr2 157134060 157134338 -96122245 - MLT1J2 LTR MaLR -127 323 2 231 228 101 0 chr2 157134347 157134426 -96122157 - L2 LINE L2 -782 2532 2446 190 308 19 0 chr2 157134452 157134504 -96122079 + L2 LINE L2 2440 2492 -822 331 151 35 29 chr2 157135065 157135297 -96121286 + AluJb SINE Alu 3 302 0 501 178 0 0 chr2 157135480 157135580 -96121003 - AluSg/x SINE Alu 0 308 209 2268 96 3 0 chr2 157135629 157135920 -96120663 + AluSq SINE Alu 1 292 -21 201 108 0 0 chr2 157135947 157135984 -96120599 + (T)n Simple_repeat Simple_repeat 1 37 0 210 122 41 41 chr2 157136014 157136063 -96120520 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 27 49 0 0 chr2 157136130 157136171 -96120412 + AT_rich Low_complexity Low_complexity 1 41 0 359 278 35 69 chr2 157136205 157136378 -96120205 - L1ME4a LINE L1 -11 6110 5944 1179 164 34 84 chr2 157136385 157136647 -96119936 - AluJo SINE Alu 0 312 64 665 236 0 0 chr2 157136891 157137014 -96119569 + FLAM_A SINE Alu 5 127 -6 615 287 50 10 chr2 157137452 157137811 -96118772 - MLT1I LTR MaLR -6 403 1 2198 101 20 0 chr2 157137961 157138257 -96118326 + AluSp SINE Alu 1 302 -11 22 0 0 0 chr2 157138662 157138684 -96117899 + AT_rich Low_complexity Low_complexity 1 22 0 1043 178 11 0 chr2 157138932 157139106 -96117477 - AluJo SINE Alu -17 295 120 2304 104 0 0 chr2 157139449 157139746 -96116837 - AluSg SINE Alu -13 297 1 720 90 449 0 chr2 157143671 157143736 -96112847 + MER30 DNA MER1_type 4 39 -191 2496 70 0 0 chr2 157143736 157144037 -96112546 - AluY SINE Alu -10 301 1 720 90 449 0 chr2 157144037 157144127 -96112456 + MER30 DNA MER1_type 39 229 -1 272 333 22 11 chr2 157144136 157144226 -96112357 + MIR3 SINE MIR 111 201 -7 1773 182 3 10 chr2 157144367 157144674 -96111909 + AluJb SINE Alu 5 309 -3 265 232 0 0 chr2 157144695 157144751 -96111832 - MIR SINE MIR -93 169 114 21 0 0 0 chr2 157144878 157144899 -96111684 + AT_rich Low_complexity Low_complexity 1 21 0 24 67 0 0 chr2 157145089 157145134 -96111449 + AT_rich Low_complexity Low_complexity 1 45 0 911 96 89 38 chr2 157145202 157145359 -96111224 + L1PA13 LINE L1 5999 6163 0 23 0 0 0 chr2 157145375 157145398 -96111185 + AT_rich Low_complexity Low_complexity 1 23 0 2146 106 3 3 chr2 157145408 157145725 -96110858 - AluSx SINE Alu 0 317 1 2652 48 7 0 chr2 157146830 157147139 -96109444 - AluY SINE Alu 0 311 1 2164 110 33 7 chr2 157147383 157147684 -96108899 + AluSx SINE Alu 1 309 -3 2323 68 7 16 chr2 157147725 157148032 -96108551 + AluY SINE Alu 1 304 -7 1677 164 62 7 chr2 157149429 157149704 -96106879 + AluJo SINE Alu 5 294 -18 2124 128 0 0 chr2 157149706 157149994 -96106589 + AluSx SINE Alu 1 288 -24 413 288 73 34 chr2 157150687 157150892 -96105691 - MIR SINE MIR -2 260 48 27 29 0 0 chr2 157151463 157151497 -96105086 + AT_rich Low_complexity Low_complexity 1 34 0 1909 156 17 7 chr2 157153260 157153561 -96103022 + AluSx SINE Alu 1 304 -8 31 76 0 0 chr2 157153603 157153669 -96102914 + AT_rich Low_complexity Low_complexity 1 66 0 732 201 0 8 chr2 157153669 157153803 -96102780 - FLAM_A SINE Alu 0 133 1 1750 190 3 7 chr2 157153841 157154146 -96102437 + AluJo SINE Alu 1 304 -8 2365 88 0 3 chr2 157155137 157155433 -96101150 + AluSx SINE Alu 1 295 -17 2408 97 3 0 chr2 157155935 157156244 -96100339 - AluSx SINE Alu -2 310 1 1602 194 14 0 chr2 157156361 157156650 -96099933 + 7SLRNA srpRNA srpRNA 21 313 -7 25 23 0 23 chr2 157156956 157156987 -96099596 + AT_rich Low_complexity Low_complexity 1 32 -10 2152 137 0 0 chr2 157156987 157157286 -96099297 + AluSx SINE Alu 1 299 -13 25 23 0 23 chr2 157157286 157157297 -96099286 + AT_rich Low_complexity Low_complexity 32 42 0 2133 108 11 0 chr2 157157385 157157663 -96098920 + AluSx SINE Alu 1 306 0 226 0 0 0 chr2 157157663 157157688 -96098895 + (TAAAA)n Simple_repeat Simple_repeat 3 145 0 21 0 0 0 chr2 157158094 157158115 -96098468 + AT_rich Low_complexity Low_complexity 1 21 0 605 245 7 7 chr2 157158429 157158576 -96098007 + MER103 DNA DNA 2 148 -18 2424 79 3 0 chr2 157159193 157159496 -96097087 + AluSp SINE Alu 1 304 -9 2216 102 0 7 chr2 157159776 157160071 -96096512 + AluSc SINE Alu 1 293 -16 1821 140 12 64 chr2 157160180 157160313 -96096270 + AluJb SINE Alu 1 139 -173 1986 148 3 3 chr2 157160313 157160603 -96095980 + AluSx SINE Alu 1 290 -22 1821 140 12 64 chr2 157160603 157160797 -96095786 + AluJb SINE Alu 139 311 -1 248 302 0 52 chr2 157160958 157161054 -96095529 - L1MC/D LINE L1 -1949 5859 5769 1524 148 164 19 chr2 157161224 157161487 -96095096 - AluJo SINE Alu 0 302 2 2395 57 0 0 chr2 157161503 157161818 -96094765 - AluY SINE Alu 0 315 1 261 0 0 0 chr2 157161825 157161854 -96094729 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 316 256 124 31 chr2 157161984 157162113 -96094470 - L1MC/D LINE L1 -2413 5395 5255 21 0 0 0 chr2 157162142 157162163 -96094420 + AT_rich Low_complexity Low_complexity 1 21 0 833 183 26 42 chr2 157162204 157162395 -96094188 + MIR SINE MIR 21 208 -54 792 182 0 0 chr2 157162442 157162563 -96094020 + FLAM_C SINE Alu 15 135 -8 2318 83 3 3 chr2 157162838 157163138 -96093445 - AluSp SINE Alu -13 300 1 2150 88 0 20 chr2 157163174 157163470 -96093113 + AluSx SINE Alu 10 299 -13 1258 268 61 18 chr2 157163975 157164464 -96092119 - L1ME4a LINE L1 0 6121 5612 228 242 136 23 chr2 157164484 157164616 -96091967 - L1ME4a LINE L1 -2348 5460 5314 1589 121 25 16 chr2 157164816 157165255 -96091328 - LTR54 LTR ERV1 0 510 3 3323 122 152 35 chr2 157165371 157165541 -96091042 + MER39 LTR ERV1 1 150 -557 1856 135 3 55 chr2 157165541 157165852 -96090731 + AluJo SINE Alu 3 297 -15 3323 122 152 35 chr2 157165852 157166312 -96090271 + MER39 LTR ERV1 150 705 -2 2178 94 7 3 chr2 157166361 157166658 -96089925 + AluSx SINE Alu 1 298 -14 447 210 14 87 chr2 157166660 157166798 -96089785 - L2 LINE L2 -37 3276 3149 285 278 71 76 chr2 157166839 157167037 -96089546 - L2 LINE L2 -1407 1907 1711 642 272 65 4 chr2 157167280 157167512 -96089071 - LTR33 LTR ERVL -275 246 1 371 257 0 0 chr2 157167512 157167586 -96088997 - L2 LINE L2 -1734 1580 1507 1389 212 82 74 chr2 157167587 157167747 -96088836 - Charlie4a DNA MER1_type -1454 507 350 1159 157 0 17 chr2 157167747 157167925 -96088658 + FAM SINE Alu 1 175 0 1389 212 82 74 chr2 157167925 157168009 -96088574 - Charlie4a DNA MER1_type -1611 350 268 1710 162 32 21 chr2 157168009 157168293 -96088290 + AluJb SINE Alu 1 287 -25 1389 212 82 74 chr2 157168293 157168533 -96088050 - Charlie4a DNA MER1_type -1693 268 18 1797 225 49 87 chr2 157168537 157169039 -96087544 - L2 LINE L2 -1814 1500 1029 2015 146 0 3 chr2 157169039 157169333 -96087250 - AluSx SINE Alu -19 293 1 1797 225 49 87 chr2 157169333 157169506 -96087077 - L2 LINE L2 -2285 1029 851 2517 180 29 41 chr2 157169516 157169963 -96086620 + MLT1D LTR MaLR 1 444 -61 2275 95 0 0 chr2 157169963 157170269 -96086314 + AluSx SINE Alu 1 306 0 2517 180 29 41 chr2 157170269 157170331 -96086252 + MLT1D LTR MaLR 444 505 0 236 191 0 0 chr2 157170693 157170740 -96085843 - Alu SINE Alu -1 298 252 2599 52 0 0 chr2 157170819 157171124 -96085459 + AluY SINE Alu 7 311 0 2258 105 0 3 chr2 157171398 157171694 -96084889 - AluSx SINE Alu -17 295 1 2046 133 3 7 chr2 157171716 157172018 -96084565 - AluJb SINE Alu -11 301 1 743 247 51 79 chr2 157173049 157173463 -96083120 + L2 LINE L2 2750 3156 -157 189 0 0 0 chr2 157173472 157173493 -96083090 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 291 28 0 0 chr2 157173502 157173538 -96083045 + (TTG)n Simple_repeat Simple_repeat 2 37 0 1901 115 0 4 chr2 157173540 157173801 -96082782 - AluSq SINE Alu -53 260 1 774 167 8 16 chr2 157173803 157173929 -96082654 - FLAM_A SINE Alu -8 134 10 1355 193 180 98 chr2 157174008 157174089 -96082494 - LTR41 LTR ERVL 0 795 722 2192 103 0 14 chr2 157174089 157174380 -96082203 + AluSg SINE Alu 1 287 -23 1355 193 180 98 chr2 157174380 157174872 -96081711 - LTR41 LTR ERVL -73 722 129 2343 88 30 7 chr2 157174872 157175177 -96081406 - AluSx SINE Alu 0 312 1 1355 193 180 98 chr2 157175177 157175296 -96081287 - LTR41 LTR ERVL -666 129 21 1344 117 81 14 chr2 157176259 157176482 -96080101 + Tigger7 DNA MER2_type 2254 2491 0 1073 81 0 7 chr2 157176632 157176768 -96079815 - AluSq/x SINE Alu -177 135 1 2809 193 25 32 chr2 157176775 157177341 -96079242 - MER68 LTR ERV1 0 562 1 1957 129 14 3 chr2 157177578 157177872 -96078711 + AluSx SINE Alu 1 297 -15 2382 91 3 10 chr2 157178024 157178331 -96078252 - AluSg SINE Alu -5 305 1 28 29 0 0 chr2 157178528 157178563 -96078020 + AT_rich Low_complexity Low_complexity 1 35 0 23 33 0 0 chr2 157178662 157178692 -96077891 + AT_rich Low_complexity Low_complexity 1 30 0 1394 152 5 5 chr2 157178987 157179234 -96077349 + L1MB7 LINE L1 5725 5971 -213 2097 130 10 3 chr2 157179234 157179541 -96077042 + AluSx SINE Alu 1 309 -3 2958 142 38 11 chr2 157179951 157180423 -96076160 - LTR45B LTR ERV1 0 489 5 1961 151 3 7 chr2 157180801 157181100 -96075483 + AluSx SINE Alu 6 303 -9 1708 184 274 53 chr2 157181170 157181968 -96074615 - L1MC4 LINE L1 -231 7811 6800 723 267 118 13 chr2 157181964 157182279 -96074304 - L1MC4 LINE L1 -1916 5892 5545 * 2405 100 3 0 chr2 157182280 157182590 -96073993 - AluSx SINE Alu -1 311 1 783 193 0 22 chr2 157182834 157182969 -96073614 - FLAM_A SINE Alu -1 132 1 2295 102 0 0 chr2 157183487 157183781 -96072802 + AluSx SINE Alu 3 296 -16 818 108 0 0 chr2 157183784 157183886 -96072697 - AluJo/FLAM SINE Alu -195 117 16 2248 117 0 0 chr2 157183937 157184246 -96072337 - AluSg SINE Alu -1 309 1 761 219 66 74 chr2 157184324 157184580 -96072003 - MIR SINE MIR -3 259 6 252 0 0 0 chr2 157184732 157184760 -96071823 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 1891 124 4 18 chr2 157184765 157185039 -96071544 - AluSx SINE Alu -37 275 6 1968 148 6 13 chr2 157185055 157185229 -96071354 - AluSx SINE Alu -3 309 136 2243 107 3 13 chr2 157185229 157185537 -96071046 - AluSx SINE Alu -6 306 2 1968 148 6 13 chr2 157185537 157185673 -96070910 - AluSx SINE Alu -176 136 1 261 0 0 0 chr2 157185829 157185858 -96070725 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2129 110 0 24 chr2 157185860 157186152 -96070431 - AluSx SINE Alu -27 285 1 264 40 60 0 chr2 157186358 157186408 -96070175 + T-rich Low_complexity Low_complexity 2 54 0 1889 142 0 3 chr2 157186410 157186692 -96069891 - AluSx SINE Alu -31 281 1 2200 108 7 0 chr2 157187004 157187300 -96069283 + AluSg SINE Alu 1 298 -12 5451 139 30 38 chr2 157187306 157187677 -96068906 - L1MA7 LINE L1 0 6291 5919 2083 147 0 0 chr2 157187677 157187976 -96068607 - AluSx SINE Alu -13 299 1 5451 139 30 38 chr2 157187976 157188918 -96067665 - L1MA7 LINE L1 -372 5919 4993 2457 81 0 0 chr2 157188918 157189216 -96067367 - AluSg SINE Alu -12 298 1 5451 139 30 38 chr2 157189216 157189235 -96067348 - L1MA7 LINE L1 -1298 4993 4975 292 281 0 0 chr2 157189308 157189372 -96067211 - L2 LINE L2 0 3313 3250 200 309 135 24 chr2 157189772 157189863 -96066720 + MIR SINE MIR 109 219 -43 1805 169 3 10 chr2 157189863 157190165 -96066418 + AluSx SINE Alu 1 300 -12 200 309 135 24 chr2 157190165 157190199 -96066384 + MIR SINE MIR 219 248 -14 1882 158 7 0 chr2 157190407 157190716 -96065867 + AluJo SINE Alu 1 311 0 2017 109 33 0 chr2 157191363 157191638 -96064945 - AluSx SINE Alu -18 294 11 203 281 101 43 chr2 157191755 157191894 -96064689 - L2 LINE L2 -452 2862 2716 768 208 0 8 chr2 157191916 157192046 -96064537 + FRAM SINE Alu 32 160 -16 227 286 0 18 chr2 157192145 157192201 -96064382 - L2 LINE L2 -76 3237 3183 2348 78 7 3 chr2 157192207 157192513 -96064070 + AluSg SINE Alu 4 310 0 594 157 0 0 chr2 157192514 157192635 -96063948 + (TA)n Simple_repeat Simple_repeat 1 121 0 2338 72 0 0 chr2 157192887 157193179 -96063404 + AluSg1 SINE Alu 1 292 -17 429 275 7 47 chr2 157193284 157193433 -96063150 + MER5A DNA MER1_type 47 189 0 328 186 71 0 chr2 157193459 157193529 -96063054 - MIR SINE MIR -107 155 81 2117 69 38 66 chr2 157193577 157193897 -96062686 - AluSx SINE Alu -1 311 1 207 88 0 0 chr2 157194122 157194156 -96062427 + (GGGAA)n Simple_repeat Simple_repeat 1 34 0 2164 104 6 19 chr2 157195733 157196050 -96060533 - AluSp SINE Alu 0 313 1 182 337 82 0 chr2 157196157 157196255 -96060328 - MIR SINE MIR -37 225 120 724 186 0 57 chr2 157196694 157196834 -96059749 - FLAM_A SINE Alu -1 132 1 2053 121 21 3 chr2 157196842 157197132 -96059451 - AluSx SINE Alu -17 295 1 1728 103 110 22 chr2 157197399 157197671 -96058912 - AluSp SINE Alu -17 296 1 1940 78 103 7 chr2 157198379 157198650 -96057933 + AluSq SINE Alu 1 297 -16 189 0 0 0 chr2 157199024 157199045 -96057538 + (TTTTTA)n Simple_repeat Simple_repeat 2 22 0 2366 88 3 0 chr2 157199415 157199710 -96056873 + AluY SINE Alu 1 296 -15 983 74 201 0 chr2 157199786 157199935 -96056648 + AluY SINE Alu 125 303 -8 2249 83 10 10 chr2 157199942 157200232 -96056351 + AluSp SINE Alu 2 291 -22 1780 114 114 19 chr2 157201853 157202086 -96054497 - MER2 DNA MER2_type 0 345 136 5643 150 55 84 chr2 157202086 157202563 -96054020 - Tigger3b DNA MER2_type -1797 1231 741 1774 176 7 0 chr2 157202563 157202852 -96053731 - AluSx SINE Alu -19 293 3 5643 150 55 84 chr2 157202852 157202954 -96053629 - Tigger3b DNA MER2_type -2287 741 637 2094 109 3 3 chr2 157202954 157203238 -96053345 + AluSx SINE Alu 13 296 -16 5643 150 55 84 chr2 157203238 157203665 -96052918 - Tigger3b DNA MER2_type -2391 637 267 2346 110 0 0 chr2 157203665 157203973 -96052610 - AluSc SINE Alu -1 308 1 5643 150 55 84 chr2 157203973 157204231 -96052352 - Tigger3b DNA MER2_type -2761 267 3 1780 114 114 19 chr2 157204231 157204312 -96052271 - MER2 DNA MER2_type -209 136 1 1880 157 17 3 chr2 157204806 157205105 -96051478 + AluJo SINE Alu 1 303 -9 701 275 181 32 chr2 157205456 157205928 -96050655 - L2 LINE L2 -17 3296 2735 932 153 0 0 chr2 157205928 157206059 -96050524 - FLAM_C SINE Alu -2 131 1 724 172 8 16 chr2 157256288 157256416 -96000167 + FLAM_A SINE Alu 10 136 -6 1922 115 0 4 chr2 157256416 157256677 -95999906 + AluSq SINE Alu 1 260 -53 291 28 0 0 chr2 157256679 157256715 -95999868 + (CAA)n Simple_repeat Simple_repeat 2 37 0 189 0 0 0 chr2 157256724 157256745 -95999838 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 651 249 51 79 chr2 157256754 157257168 -95999415 - L2 LINE L2 -157 3156 2750 2062 133 3 7 chr2 157258199 157258501 -95998082 + AluJb SINE Alu 1 301 -11 2279 105 0 3 chr2 157258523 157258819 -95997764 + AluSx SINE Alu 1 295 -17 2172 103 33 7 chr2 157259049 157259350 -95997233 + AluSx SINE Alu 1 309 -3 2324 64 7 17 chr2 157259391 157259698 -95996885 + AluY SINE Alu 1 293 -18 1677 164 62 7 chr2 157261095 157261370 -95995213 + AluJo SINE Alu 5 294 -18 2124 128 0 0 chr2 157261372 157261660 -95994923 + AluSx SINE Alu 1 288 -24 413 288 73 34 chr2 157262353 157262558 -95994025 - MIR SINE MIR -2 260 48 27 29 0 0 chr2 157263129 157263163 -95993420 + AT_rich Low_complexity Low_complexity 1 34 0 2330 88 0 7 chr2 157264533 157264830 -95991753 + AluSx SINE Alu 1 295 -17 2408 97 3 0 chr2 157265332 157265641 -95990942 - AluSx SINE Alu -2 310 1 1602 194 14 0 chr2 157265758 157266047 -95990536 + 7SLRNA srpRNA srpRNA 21 313 -7 25 23 0 23 chr2 157266353 157266384 -95990199 + AT_rich Low_complexity Low_complexity 1 32 -10 2152 137 0 0 chr2 157266384 157266683 -95989900 + AluSx SINE Alu 1 299 -13 25 23 0 23 chr2 157266683 157266694 -95989889 + AT_rich Low_complexity Low_complexity 32 42 0 2134 108 11 0 chr2 157266782 157267085 -95989498 + AluSx SINE Alu 1 306 0 21 0 0 0 chr2 157267491 157267512 -95989071 + AT_rich Low_complexity Low_complexity 1 21 0 539 245 7 7 chr2 157267826 157267973 -95988610 + MER103 DNA DNA 2 148 -18 2417 79 3 0 chr2 157268590 157268893 -95987690 + AluSp SINE Alu 1 304 -9 2215 102 0 7 chr2 157269173 157269468 -95987115 + AluSc SINE Alu 1 293 -16 1837 140 12 64 chr2 157269577 157269710 -95986873 + AluJb SINE Alu 1 139 -173 2008 148 3 3 chr2 157269710 157270000 -95986583 + AluSx SINE Alu 1 290 -22 1837 140 12 64 chr2 157270000 157270194 -95986389 + AluJb SINE Alu 139 311 -1 360 233 83 101 chr2 157270354 157270582 -95986001 - L1ME4a LINE L1 -259 5862 5639 1411 148 164 19 chr2 157270621 157270884 -95985699 - AluJo SINE Alu 0 302 2 2369 57 0 0 chr2 157270900 157271215 -95985368 - AluY SINE Alu 0 315 1 261 0 0 0 chr2 157271222 157271251 -95985332 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 321 248 124 31 chr2 157271381 157271510 -95985073 - L1ME4a LINE L1 -2413 5395 5255 21 0 0 0 chr2 157271539 157271560 -95985023 + AT_rich Low_complexity Low_complexity 1 21 0 837 183 26 42 chr2 157271601 157271792 -95984791 + MIR SINE MIR 21 208 -54 710 190 0 0 chr2 157271839 157271960 -95984623 + FLAM_C SINE Alu 15 135 -8 1460 82 0 29 chr2 157272144 157272350 -95984233 + AluSg/x SINE Alu 98 297 -13 1058 268 62 19 chr2 157272858 157273344 -95983239 - L1ME4a LINE L1 -3 6118 5612 225 219 125 0 chr2 157273364 157273428 -95983155 - L1ME4a LINE L1 -658 5463 5392 1447 121 25 16 chr2 157273696 157274135 -95982448 - LTR54 LTR ERV1 0 510 3 3026 122 152 35 chr2 157274251 157274421 -95982162 + MER39 LTR ERV1 1 150 -557 1875 135 3 55 chr2 157274421 157274732 -95981851 + AluJo SINE Alu 3 297 -15 3026 122 152 35 chr2 157274732 157275192 -95981391 + MER39 LTR ERV1 150 705 -2 2176 94 7 3 chr2 157275241 157275538 -95981045 + AluSx SINE Alu 1 298 -14 452 210 14 87 chr2 157275540 157275678 -95980905 - L2 LINE L2 -37 3276 3149 279 278 71 76 chr2 157275719 157275917 -95980666 - L2 LINE L2 -1407 1907 1711 571 272 65 4 chr2 157276160 157276392 -95980191 - LTR33 LTR ERVL -275 246 1 370 257 0 0 chr2 157276392 157276466 -95980117 - L2 LINE L2 -1734 1580 1507 1178 212 82 74 chr2 157276467 157276627 -95979956 - Charlie4a DNA MER1_type -1454 507 350 1084 157 0 17 chr2 157276627 157276805 -95979778 + FAM SINE Alu 1 175 0 1178 212 82 74 chr2 157276805 157276889 -95979694 - Charlie4a DNA MER1_type -1611 350 268 1726 162 32 21 chr2 157276889 157277173 -95979410 + AluJb SINE Alu 1 287 -25 1178 212 82 74 chr2 157277173 157277413 -95979170 - Charlie4a DNA MER1_type -1693 268 18 1796 225 49 87 chr2 157277417 157277919 -95978664 - L2 LINE L2 -1814 1500 1029 2028 146 0 3 chr2 157277919 157278213 -95978370 - AluSx SINE Alu -19 293 1 1796 225 49 87 chr2 157278213 157278386 -95978197 - L2 LINE L2 -2285 1029 851 791 187 58 41 chr2 157278396 157278567 -95978016 + MLT1D LTR MaLR 1 174 -331 846 166 113 20 chr2 157278668 157278819 -95977764 - AluJo SINE Alu -143 169 5 2222 105 0 0 chr2 157278999 157279293 -95977290 + AluY SINE Alu 1 294 -17 1922 121 45 17 chr2 157279386 157279675 -95976908 + AluSx SINE Alu 1 297 -15 1006 147 13 13 chr2 157279733 157279889 -95976694 + AluJb SINE Alu 137 292 -20 21 0 0 0 chr2 157280837 157280858 -95975725 + AT_rich Low_complexity Low_complexity 1 21 0 2204 101 0 17 chr2 157280948 157281246 -95975337 + AluSx SINE Alu 1 293 -19 23 0 0 0 chr2 157281288 157281311 -95975272 + AT_rich Low_complexity Low_complexity 1 23 0 2111 123 0 23 chr2 157281316 157281616 -95974967 + AluJb SINE Alu 1 293 -19 299 325 74 48 chr2 157281898 157282129 -95974454 + L2 LINE L2 2740 2976 -338 318 343 79 7 chr2 157282434 157282574 -95974009 + MIR3 SINE MIR 36 185 -23 1854 123 60 27 chr2 157283058 157283392 -95973191 - THE1C LTR MaLR 0 375 31 306 281 103 74 chr2 157283934 157284137 -95972446 - L2 LINE L2 -1 3312 3104 572 239 3 31 chr2 157284140 157284304 -95972279 + L1ME1 LINE L1 6019 6334 0 1072 180 0 0 chr2 157284313 157284480 -95972103 + AluSg/x SINE Alu 132 298 -14 671 347 120 8 chr2 157284507 157284970 -95971613 - L2 LINE L2 -239 3074 2550 371 309 169 11 chr2 157285067 157285345 -95971238 - MLT1J2 LTR MaLR -127 323 2 231 228 101 0 chr2 157285354 157285433 -95971150 - L2 LINE L2 -782 2532 2446 190 308 19 0 chr2 157285459 157285511 -95971072 + L2 LINE L2 2440 2492 -822 331 151 35 29 chr2 157286072 157286304 -95970279 + AluJb SINE Alu 3 302 0 501 178 0 0 chr2 157286487 157286587 -95969996 - AluSg/x SINE Alu 0 307 208 2268 96 3 0 chr2 157286636 157286927 -95969656 + AluSq SINE Alu 1 292 -21 201 108 0 0 chr2 157286954 157286991 -95969592 + (T)n Simple_repeat Simple_repeat 1 37 0 210 122 41 41 chr2 157287021 157287070 -95969513 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 27 49 0 0 chr2 157287137 157287178 -95969405 + AT_rich Low_complexity Low_complexity 1 41 0 359 278 35 69 chr2 157287212 157287385 -95969198 - L1ME4a LINE L1 -11 6110 5944 1179 164 34 84 chr2 157287392 157287654 -95968929 - AluJo SINE Alu 0 312 64 665 236 0 0 chr2 157287898 157288021 -95968562 + FLAM_A SINE Alu 5 127 -6 615 287 50 10 chr2 157288459 157288818 -95967765 - MLT1I LTR MaLR -6 403 1 2198 101 20 0 chr2 157288968 157289264 -95967319 + AluSp SINE Alu 1 302 -11 22 0 0 0 chr2 157289669 157289691 -95966892 + AT_rich Low_complexity Low_complexity 1 22 0 1043 178 11 0 chr2 157289939 157290113 -95966470 - AluJo SINE Alu -17 295 120 2304 104 0 0 chr2 157290456 157290753 -95965830 - AluSg SINE Alu -13 297 1 720 90 449 0 chr2 157294678 157294743 -95961840 + MER30 DNA MER1_type 4 39 -191 2496 70 0 0 chr2 157294743 157295044 -95961539 - AluY SINE Alu -10 301 1 720 90 449 0 chr2 157295044 157295134 -95961449 + MER30 DNA MER1_type 39 229 -1 272 333 22 11 chr2 157295143 157295233 -95961350 + MIR3 SINE MIR 111 201 -7 1773 182 3 10 chr2 157295374 157295681 -95960902 + AluJb SINE Alu 5 309 -3 265 232 0 0 chr2 157295702 157295758 -95960825 - MIR SINE MIR -93 169 114 21 0 0 0 chr2 157295885 157295906 -95960677 + AT_rich Low_complexity Low_complexity 1 21 0 24 67 0 0 chr2 157296096 157296141 -95960442 + AT_rich Low_complexity Low_complexity 1 45 0 911 96 89 38 chr2 157296209 157296366 -95960217 + L1PA13 LINE L1 5999 6163 0 23 0 0 0 chr2 157296382 157296405 -95960178 + AT_rich Low_complexity Low_complexity 1 23 0 2146 106 3 3 chr2 157296415 157296732 -95959851 - AluSx SINE Alu 0 317 1 2506 48 7 0 chr2 157297837 157298129 -95958454 - AluY SINE Alu 0 311 18 2462 87 0 0 chr2 157298386 157298686 -95957897 - AluSq SINE Alu -11 302 3 2263 89 3 0 chr2 157298702 157298993 -95957590 - AluY SINE Alu -19 292 1 726 158 0 60 chr2 157299155 157299288 -95957295 - FLAM_C SINE Alu -18 125 1 5997 107 0 7 chr2 157299355 157300445 -95956138 + L1PB1 LINE L1 5064 6148 -3 1853 179 0 7 chr2 157300465 157300767 -95955816 + AluJb SINE Alu 1 300 -12 2452 51 0 0 chr2 157300825 157301120 -95955463 - AluY SINE Alu -16 295 1 466 317 100 0 chr2 157301301 157301481 -95955102 + MIR SINE MIR 51 248 -14 429 109 0 0 chr2 157301780 157301844 -95954739 + (CA)n Simple_repeat Simple_repeat 1 64 0 21 36 0 0 chr2 157302385 157302413 -95954170 + AT_rich Low_complexity Low_complexity 1 28 0 206 314 43 122 chr2 157302825 157303013 -95953570 + L2 LINE L2 2989 3161 -111 776 200 0 0 chr2 157303039 157303169 -95953414 - FLAM_C SINE Alu -3 130 1 1299 98 0 2 chr2 157303722 157303977 -95952606 - AluSq SINE Alu -14 299 1 671 255 96 24 chr2 157304023 157304415 -95952168 + LTR33 LTR ERVL 45 519 -2 3074 267 114 22 chr2 157304417 157305887 -95950696 - HAL1 LINE L1 -892 1615 11 2496 68 3 0 chr2 157306081 157306391 -95950192 - AluY SINE Alu 0 311 1 234 265 47 100 chr2 157307589 157308106 -95948477 - L1ME4a LINE L1 -84 6037 5539 2130 119 0 14 chr2 157308248 157308408 -95948175 - AluSg SINE Alu -19 291 135 2338 75 44 0 chr2 157308408 157308702 -95947881 - AluY SINE Alu -4 307 1 2130 119 0 14 chr2 157308702 157308835 -95947748 - AluSg SINE Alu -175 135 2 577 203 81 8 chr2 157309088 157309211 -95947372 - FLAM_C SINE Alu -1 132 1 24 32 0 0 chr2 157309211 157309242 -95947341 + AT_rich Low_complexity Low_complexity 1 31 0 2228 215 57 7 chr2 157309247 157310196 -95946387 + L1MC/D LINE L1 4618 5609 -743 1393 176 135 6 chr2 157310195 157310552 -95946031 + L1M4 LINE L1 5197 5591 -583 * 569 147 28 9 chr2 157310562 157310671 -95945912 + L1MD1 LINE L1 6132 6242 0 1439 237 70 39 chr2 157310834 157311375 -95945208 - HAL1 LINE L1 0 2507 1950 461 250 94 39 chr2 157311379 157311559 -95945024 - HAL1 LINE L1 -891 1616 1427 257 73 0 24 chr2 157311559 157311600 -95944983 + (TTCC)n Simple_repeat Simple_repeat 3 42 0 296 264 110 39 chr2 157311657 157311839 -95944744 - HAL1 LINE L1 -1472 1035 841 1050 316 70 50 chr2 157311840 157312518 -95944065 - HAL1 LINE L1 -1705 802 139 2233 101 16 0 chr2 157312518 157312825 -95943758 - AluSx SINE Alu 0 312 1 1050 316 70 50 chr2 157312825 157312837 -95943746 - HAL1 LINE L1 -2368 139 129 1558 167 60 30 chr2 157312837 157313002 -95943581 - AluJo SINE Alu -4 308 129 189 0 0 0 chr2 157313002 157313023 -95943560 + (TTAA)n Simple_repeat Simple_repeat 2 22 0 1558 167 60 30 chr2 157313023 157313156 -95943427 - AluJo SINE Alu -183 129 1 1050 316 70 50 chr2 157313156 157313250 -95943333 - HAL1 LINE L1 -2378 129 1 1766 176 0 3 chr2 157313254 157313549 -95943034 - AluJb SINE Alu -15 297 4 1085 65 0 95 chr2 157313805 157313974 -95942609 - L1PA8 LINE L1 0 6172 6020 24 32 0 0 chr2 157314211 157314242 -95942341 + AT_rich Low_complexity Low_complexity 1 31 0 27 29 0 0 chr2 157314322 157314356 -95942227 + AT_rich Low_complexity Low_complexity 1 34 0 22 56 0 0 chr2 157314798 157314834 -95941749 + AT_rich Low_complexity Low_complexity 1 36 0 340 178 6 6 chr2 157314834 157314906 -95941677 - L1ME2 LINE L1 -5 6161 6087 231 259 0 0 chr2 157314911 157314965 -95941618 - L1ME3 LINE L1 -112 6050 5997 1172 157 6 54 chr2 157314970 157315025 -95941558 + MSTD LTR MaLR 1 57 -339 1994 143 0 3 chr2 157315025 157315319 -95941264 + AluSg SINE Alu 1 293 -17 1172 157 6 54 chr2 157315319 157315585 -95940998 + MSTD LTR MaLR 57 396 0 347 236 29 53 chr2 157315595 157315802 -95940781 - L1ME3 LINE L1 -173 5991 5748 1267 293 115 36 chr2 157315823 157316353 -95940230 + MLT1E LTR MaLR 22 593 0 2356 97 0 6 chr2 157316368 157316679 -95939904 - AluSg SINE Alu -1 309 1 583 233 80 40 chr2 157316705 157317005 -95939578 - L1MEc LINE L1 -4176 2220 1909 1735 96 0 17 chr2 157317348 157317578 -95939005 + AluSg SINE Alu 62 287 -23 1302 231 247 31 chr2 157317635 157318070 -95938513 - LTR41 LTR ERVL -78 695 113 2327 92 30 7 chr2 157318070 157318375 -95938208 - AluSx SINE Alu 0 312 1 1302 231 247 31 chr2 157318375 157318494 -95938089 - LTR41 LTR ERVL -660 113 21 1344 117 81 14 chr2 157319457 157319680 -95936903 + Tigger7 DNA MER2_type 2254 2491 0 1073 81 0 7 chr2 157319830 157319966 -95936617 - AluSq/x SINE Alu -177 135 1 2809 193 25 32 chr2 157319973 157320539 -95936044 - MER68 LTR ERV1 0 562 1 1930 126 17 3 chr2 157320776 157321069 -95935514 + AluSx SINE Alu 1 297 -15 2382 91 3 10 chr2 157321221 157321528 -95935055 - AluSg SINE Alu -5 305 1 28 29 0 0 chr2 157321725 157321760 -95934823 + AT_rich Low_complexity Low_complexity 1 35 0 23 33 0 0 chr2 157321859 157321889 -95934694 + AT_rich Low_complexity Low_complexity 1 30 0 1412 148 5 5 chr2 157322184 157322431 -95934152 + L1MB7 LINE L1 5725 5971 -213 2119 127 10 3 chr2 157322431 157322738 -95933845 + AluSx SINE Alu 1 309 -3 2958 142 38 11 chr2 157323148 157323620 -95932963 - LTR45B LTR ERV1 0 489 5 1961 151 3 7 chr2 157323998 157324297 -95932286 + AluSx SINE Alu 6 303 -9 1713 184 274 53 chr2 157324367 157325165 -95931418 - L1MC4 LINE L1 -231 7811 6800 723 267 118 13 chr2 157325161 157325476 -95931107 - L1MC4 LINE L1 -1916 5892 5545 * 2379 101 3 0 chr2 157325477 157325784 -95930799 - AluSx SINE Alu -4 308 1 783 193 0 22 chr2 157326028 157326163 -95930420 - FLAM_A SINE Alu -1 132 1 2323 99 0 0 chr2 157326681 157326975 -95929608 + AluSx SINE Alu 3 296 -16 818 108 0 0 chr2 157326978 157327080 -95929503 - AluJo/FLAM SINE Alu -195 117 16 2261 113 0 0 chr2 157327131 157327440 -95929143 - AluSg SINE Alu -1 309 1 761 219 66 74 chr2 157327518 157327774 -95928809 - MIR SINE MIR -3 259 6 252 0 0 0 chr2 157327926 157327954 -95928629 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 1874 121 7 18 chr2 157327959 157328232 -95928351 - AluSx SINE Alu -37 275 6 2029 138 6 13 chr2 157328248 157328422 -95928161 - AluSx SINE Alu -3 309 136 2243 107 3 13 chr2 157328422 157328730 -95927853 - AluSx SINE Alu -6 306 2 2029 138 6 13 chr2 157328730 157328866 -95927717 - AluSx SINE Alu -176 136 1 234 0 0 0 chr2 157329022 157329048 -95927535 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2129 110 0 24 chr2 157329050 157329342 -95927241 - AluSx SINE Alu -27 285 1 264 40 60 0 chr2 157329548 157329598 -95926985 + T-rich Low_complexity Low_complexity 2 54 0 1889 142 0 3 chr2 157329600 157329882 -95926701 - AluSx SINE Alu -31 281 1 2234 105 7 0 chr2 157330195 157330491 -95926092 + AluSg SINE Alu 1 298 -12 5451 139 30 38 chr2 157330495 157330866 -95925717 - L1MA7 LINE L1 0 6291 5919 2099 144 0 0 chr2 157330866 157331165 -95925418 - AluSx SINE Alu -13 299 1 5451 139 30 38 chr2 157331165 157332107 -95924476 - L1MA7 LINE L1 -372 5919 4993 2448 81 0 0 chr2 157332107 157332404 -95924179 - AluSg SINE Alu -13 297 1 5451 139 30 38 chr2 157332404 157332423 -95924160 - L1MA7 LINE L1 -1298 4993 4975 292 281 0 0 chr2 157332496 157332560 -95924023 - L2 LINE L2 0 3313 3250 200 309 135 24 chr2 157332960 157333051 -95923532 + MIR SINE MIR 109 219 -43 1822 166 3 10 chr2 157333051 157333352 -95923231 + AluSx SINE Alu 1 299 -13 200 309 135 24 chr2 157333352 157333386 -95923197 + MIR SINE MIR 219 248 -14 180 0 0 0 chr2 157333389 157333409 -95923174 + (T)n Simple_repeat Simple_repeat 1 20 0 1909 154 7 0 chr2 157333594 157333903 -95922680 + AluJo SINE Alu 1 311 0 2034 106 33 0 chr2 157334550 157334825 -95921758 - AluSx SINE Alu -18 294 11 203 281 101 43 chr2 157334942 157335081 -95921502 - L2 LINE L2 -452 2862 2716 768 208 0 8 chr2 157335103 157335233 -95921350 + FRAM SINE Alu 32 160 -16 225 205 0 128 chr2 157335332 157335410 -95921173 - L2 LINE L2 -76 3237 3170 2360 78 7 3 chr2 157335417 157335726 -95920857 + AluSg SINE Alu 1 310 0 308 235 0 0 chr2 157335726 157335794 -95920789 + L1MC4 LINE L1 6636 6703 -1339 258 153 0 0 chr2 157335796 157335855 -95920728 + (TA)n Simple_repeat Simple_repeat 1 59 0 2314 76 0 0 chr2 157336107 157336398 -95920185 + AluSg1 SINE Alu 1 291 -18 429 275 7 47 chr2 157336503 157336652 -95919931 + MER5A DNA MER1_type 47 189 0 328 186 71 0 chr2 157336678 157336748 -95919835 - MIR SINE MIR -107 155 81 2126 68 37 65 chr2 157336798 157337119 -95919464 - AluSx SINE Alu 0 312 1 207 88 0 0 chr2 157337344 157337378 -95919205 + (GGGAA)n Simple_repeat Simple_repeat 1 34 0 2164 104 6 19 chr2 157338957 157339274 -95917309 - AluSp SINE Alu 0 313 1 182 337 82 0 chr2 157339381 157339479 -95917104 - MIR SINE MIR -37 225 120 213 311 133 7 chr2 157339724 157339859 -95916724 + MIR3 SINE MIR 46 197 -11 724 186 0 57 chr2 157339922 157340062 -95916521 - FLAM_A SINE Alu -1 132 1 2053 121 21 3 chr2 157340070 157340360 -95916223 - AluSx SINE Alu -17 295 1 1728 103 110 22 chr2 157340627 157340899 -95915684 - AluSp SINE Alu -17 296 1 1913 78 104 8 chr2 157341607 157341875 -95914708 + AluSq SINE Alu 1 294 -19 189 0 0 0 chr2 157342249 157342270 -95914313 + (TTTTTA)n Simple_repeat Simple_repeat 2 22 0 2375 88 3 0 chr2 157342640 157342936 -95913647 + AluY SINE Alu 1 297 -14 1031 71 194 0 chr2 157343012 157343167 -95913416 + AluY SINE Alu 125 309 -2 2263 79 10 10 chr2 157343175 157343465 -95913118 + AluSp SINE Alu 2 291 -22 1780 114 114 19 chr2 157345086 157345319 -95911264 - MER2 DNA MER2_type 0 345 136 5662 149 55 83 chr2 157345319 157345796 -95910787 - Tigger3b DNA MER2_type -1797 1231 742 1774 176 7 0 chr2 157345796 157346085 -95910498 - AluSx SINE Alu -19 293 3 5662 149 55 83 chr2 157346085 157346187 -95910396 - Tigger3b DNA MER2_type -2286 742 639 2108 106 3 3 chr2 157346187 157346471 -95910112 + AluSx SINE Alu 13 296 -16 5662 149 55 83 chr2 157346471 157346896 -95909687 - Tigger3b DNA MER2_type -2389 639 267 2346 110 0 0 chr2 157346896 157347204 -95909379 - AluSc SINE Alu -1 308 1 5662 149 55 83 chr2 157347204 157347462 -95909121 - Tigger3b DNA MER2_type -2761 267 3 1780 114 114 19 chr2 157347462 157347543 -95909040 - MER2 DNA MER2_type -209 136 1 1905 153 17 3 chr2 157348037 157348337 -95908246 + AluJo SINE Alu 1 304 -8 701 275 181 32 chr2 157348688 157349160 -95907423 - L2 LINE L2 -17 3296 2735 910 160 0 0 chr2 157349160 157349291 -95907292 - FLAM_C SINE Alu -2 131 1 2140 99 24 0 chr2 157349419 157349711 -95906872 - AluSq SINE Alu -14 299 1 2007 112 6 55 chr2 157350086 157350398 -95906185 - AluSx SINE Alu -15 297 1 2465 206 71 32 chr2 157350746 157351334 -95905249 - MER82 DNA MER2_type -42 611 1 2749 162 74 38 chr2 157351381 157351685 -95904898 - L1MB4 LINE L1 -2 6178 5886 2132 118 0 7 chr2 157351685 157351981 -95904602 - AluSc SINE Alu -13 296 3 2749 162 74 38 chr2 157351981 157352257 -95904326 - L1MB4 LINE L1 -294 5886 5577 1174 141 69 110 chr2 157352258 157352548 -95904035 - AluJb SINE Alu -23 289 12 2402 228 65 31 chr2 157352561 157353245 -95903338 - L1MB4 LINE L1 -595 5585 4925 2167 108 0 38 chr2 157353245 157353560 -95903023 - AluSx SINE Alu -9 303 1 2402 228 65 31 chr2 157353560 157353750 -95902833 - L1MB4 LINE L1 -1255 4925 4743 2289 95 0 3 chr2 157353750 157354055 -95902528 - AluSg SINE Alu -6 304 1 2402 228 65 31 chr2 157354055 157354241 -95902342 - L1MB4 LINE L1 -1437 4743 4565 1987 122 56 0 chr2 157354241 157354528 -95902055 - AluSx SINE Alu -9 303 1 2402 228 65 31 chr2 157354528 157354684 -95901899 - L1MB4 LINE L1 -1615 4565 4333 2323 107 7 0 chr2 157354783 157355092 -95901491 - AluSp SINE Alu -2 311 1 207 88 0 0 chr2 157355094 157355128 -95901455 + (T)n Simple_repeat Simple_repeat 1 34 0 1843 136 0 49 chr2 157355222 157355365 -95901218 + AluSx SINE Alu 3 126 -186 1923 107 37 0 chr2 157355365 157355660 -95900923 + AluSx SINE Alu 1 305 0 1843 136 0 49 chr2 157355660 157355823 -95900760 + AluSx SINE Alu 126 295 -17 2184 99 20 0 chr2 157356759 157357061 -95899522 - AluSq SINE Alu -5 308 1 323 254 225 14 chr2 157357072 157357214 -95899369 - MIR SINE MIR -24 238 67 2362 81 0 3 chr2 157357606 157357902 -95898681 - AluY SINE Alu -16 295 1 2248 114 0 0 chr2 157357902 157358201 -95898382 - AluSg SINE Alu -11 299 1 1705 144 42 4 chr2 157358268 157358531 -95898052 - AluJb SINE Alu -35 277 5 258 326 34 0 chr2 157358703 157358792 -95897791 - MLT1J LTR MaLR -94 417 326 1865 98 58 11 chr2 157359095 157359361 -95897222 + AluSp SINE Alu 3 284 -29 324 0 0 0 chr2 157359361 157359397 -95897186 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 189 0 0 0 chr2 157359586 157359607 -95896976 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 1868 146 4 7 chr2 157359610 157359891 -95896692 - AluSx SINE Alu -32 280 1 474 224 67 22 chr2 157360251 157360385 -95896198 - MER20 DNA MER1_type -24 195 56 24 67 0 0 chr2 157360415 157360460 -95896123 + AT_rich Low_complexity Low_complexity 1 45 0 29 0 0 0 chr2 157360532 157360561 -95896022 + AT_rich Low_complexity Low_complexity 1 29 0 198 33 33 0 chr2 157361023 157361053 -95895530 + (TTTA)n Simple_repeat Simple_repeat 2 180 0 1917 131 7 7 chr2 157361053 157361336 -95895247 - AluSx SINE Alu -29 283 1 2073 123 17 3 chr2 157361471 157361772 -95894811 + AluSx SINE Alu 1 305 -7 2548 61 0 0 chr2 157362019 157362316 -95894267 - AluY SINE Alu -9 302 6 24 0 0 0 chr2 157362438 157362462 -95894121 + AT_rich Low_complexity Low_complexity 1 24 0 25 51 0 0 chr2 157362530 157362569 -95894014 + AT_rich Low_complexity Low_complexity 1 39 0 2156 104 0 7 chr2 157363523 157363831 -95892752 + AluSx SINE Alu 1 306 -6 1579 199 13 13 chr2 157363840 157364142 -95892441 + AluJo SINE Alu 1 302 -10 1879 160 7 0 chr2 157364990 157365283 -95891300 + AluJb SINE Alu 1 295 -17 429 306 158 9 chr2 157365294 157365516 -95891067 - MIR SINE MIR -3 259 5 1340 210 24 14 chr2 157365777 157366067 -95890516 + AluJo SINE Alu 1 293 -19 21 0 0 0 chr2 157366414 157366435 -95890148 + AT_rich Low_complexity Low_complexity 1 21 0 1704 186 103 18 chr2 157366475 157366874 -95889709 - Tigger2a DNA MER2_type -1 433 1 2306 80 10 17 chr2 157366964 157367266 -95889317 + AluSp SINE Alu 1 300 -13 2022 141 37 0 chr2 157367283 157367580 -95889003 + AluSx SINE Alu 1 308 -4 534 255 158 16 chr2 157368263 157368447 -95888136 + MIR SINE MIR 2 211 -51 376 146 0 0 chr2 157368588 157368643 -95887940 + AluS SINE Alu 3 57 -242 957 180 23 0 chr2 157368643 157368815 -95887768 + AluJb SINE Alu 122 297 -15 258 250 10 40 chr2 157368929 157369029 -95887554 + L1MC/D LINE L1 5695 5791 -2017 2098 96 11 0 chr2 157369630 157369953 -95886630 - AluSp SINE Alu 0 327 2 25 0 0 0 chr2 157369962 157369987 -95886596 + AT_rich Low_complexity Low_complexity 1 25 0 2161 88 7 16 chr2 157370349 157370657 -95885926 - AluY SINE Alu -6 305 1 1878 154 41 0 chr2 157371887 157372179 -95884404 - AluSx SINE Alu -8 304 1 1631 210 66 25 chr2 157372398 157372837 -95883746 - MLT1C LTR MaLR -5 462 6 1955 139 36 3 chr2 157373118 157373420 -95883163 - AluSx SINE Alu 0 312 1 2085 92 39 3 chr2 157373596 157373880 -95882703 - AluSq SINE Alu -19 294 1 2742 19 0 0 chr2 157374516 157374824 -95881759 - AluY SINE Alu -3 308 1 2078 124 17 0 chr2 157375124 157375422 -95881161 - AluSx SINE Alu -9 303 1 1810 134 33 39 chr2 157375618 157375925 -95880658 - AluSx SINE Alu -7 305 1 246 318 112 9 chr2 157376098 157376205 -95880378 + L2 LINE L2 2685 2802 -512 188 207 95 86 chr2 157376246 157376362 -95880221 + L2 LINE L2 3113 3229 -84 229 241 123 77 chr2 157376461 157376656 -95879927 - L1M4 LINE L1 -1455 4691 4488 795 183 52 0 chr2 157377021 157377174 -95879409 - FAM SINE Alu -1 48 1 2316 74 7 3 chr2 157377426 157377723 -95878860 - AluSq SINE Alu -15 298 1 2180 95 14 0 chr2 157378169 157378465 -95878118 - AluSx SINE Alu -12 300 1 1265 172 84 76 chr2 157378702 157379045 -95877538 + MER7A DNA MER2_type 3 346 0 273 278 28 83 chr2 157380635 157380815 -95875768 - L1MC4 LINE L1 -8 8034 7865 633 195 188 55 chr2 157380822 157380876 -95875707 - L1MC4 LINE L1 -430 7612 7567 2199 110 0 10 chr2 157380876 157381184 -95875399 + AluSx SINE Alu 1 305 -7 633 195 188 55 chr2 157381184 157381385 -95875198 - L1MC4 LINE L1 -475 7567 7323 391 273 14 7 chr2 157381434 157381573 -95875010 - L1MC4 LINE L1 -1453 6589 6450 907 139 40 104 chr2 157383083 157383392 -95873191 - MER2 DNA MER2_type 0 345 7 1959 153 0 3 chr2 157384309 157384609 -95871974 - AluSq SINE Alu -8 305 7 1656 183 28 3 chr2 157384720 157385004 -95871579 - AluJb SINE Alu -21 291 1 2324 98 0 0 chr2 157385808 157386113 -95870470 - AluY SINE Alu -6 305 1 2434 70 0 3 chr2 157388973 157389273 -95867310 - AluY SINE Alu -12 299 1 1974 158 3 0 chr2 157389444 157389754 -95866829 - AluJb SINE Alu -1 311 1 25 51 0 0 chr2 157389951 157389990 -95866593 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr2 157390138 157390160 -95866423 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr2 157390230 157390250 -95866333 + (TG)n Simple_repeat Simple_repeat 2 21 0 2050 103 17 20 chr2 157394522 157394822 -95861761 + AluSx SINE Alu 1 299 -13 2080 134 0 7 chr2 157394916 157395223 -95861360 - AluSg SINE Alu -4 306 2 277 312 149 14 chr2 157396540 157396681 -95859902 - MIR SINE MIR -31 231 72 22 35 0 0 chr2 157397243 157397272 -95859311 + AT_rich Low_complexity Low_complexity 1 29 0 964 155 67 80 chr2 157397968 157398207 -95858376 - MER46A DNA MER2_type 0 236 1 1244 203 79 20 chr2 157398484 157398828 -95857755 - L1MB8 LINE L1 0 6178 5801 * 14342 46 0 0 chr2 157398825 157400599 -95855984 - L1P LINE L1 -867 5279 3506 1044 134 88 0 chr2 157400586 157400780 -95855803 - L1MB8 LINE L1 -365 5819 5609 * 1674 129 66 11 chr2 157400874 157401161 -95855422 - AluSx SINE Alu -9 303 1 25 31 0 0 chr2 157401175 157401207 -95855376 + AT_rich Low_complexity Low_complexity 1 32 0 1881 150 11 0 chr2 157401978 157402258 -95854325 + AluSx SINE Alu 1 283 -29 2278 83 14 0 chr2 157405001 157405291 -95851292 - AluY SINE Alu -17 294 1 2169 111 3 3 chr2 157405292 157405590 -95850993 - AluSq SINE Alu -15 298 1 1348 192 53 0 chr2 157405827 157406072 -95850511 + AluSx SINE Alu 42 299 -13 285 253 69 0 chr2 157406620 157406707 -95849876 - MER5A DNA MER1_type -83 106 14 1158 191 112 7 chr2 157408473 157408750 -95847833 + MER58B DNA MER1_type 35 340 -1 1379 101 19 14 chr2 157409335 157409542 -95847041 + MER1B DNA MER1_type 132 339 0 1732 152 126 42 chr2 157410294 157410722 -95845861 - MLT1C LTR MaLR 0 467 4 282 188 175 0 chr2 157411048 157411128 -95845455 + L1MC5 LINE L1 7808 7901 -60 1611 157 65 44 chr2 157411129 157411259 -95845324 + MER2 DNA MER2_type 1 127 -218 1637 136 136 3 chr2 157411259 157411553 -95845030 + MER1B DNA MER1_type 1 333 -4 1611 157 65 44 chr2 157411553 157411760 -95844823 + MER2 DNA MER2_type 127 345 0 2029 136 0 0 chr2 157411895 157412189 -95844394 + AluSx SINE Alu 1 294 -18 260 333 52 0 chr2 157412359 157412455 -95844128 + L2 LINE L2 3137 3237 -35 22 56 0 0 chr2 157412805 157412841 -95843742 + AT_rich Low_complexity Low_complexity 1 36 0 2985 186 63 71 chr2 157413641 157414594 -95841989 + L1MB7 LINE L1 5184 6127 -57 195 129 0 0 chr2 157414627 157414658 -95841925 + (TG)n Simple_repeat Simple_repeat 2 32 0 263 295 68 19 chr2 157415016 157415223 -95841360 - L1MC4a LINE L1 -1869 5939 5723 21 36 0 0 chr2 157415348 157415376 -95841207 + AT_rich Low_complexity Low_complexity 1 28 0 652 188 54 0 chr2 157415380 157415492 -95841091 - FLAM_C SINE Alu -25 118 1 336 295 77 27 chr2 157415637 157415820 -95840763 - L1MC4a LINE L1 -745 5401 5210 1569 185 24 20 chr2 157415946 157416243 -95840340 + AluJo SINE Alu 1 298 -14 470 299 132 43 chr2 157416314 157416848 -95839735 - L1MC4a LINE L1 -1170 4976 4378 1769 190 7 0 chr2 157416993 157417277 -95839306 - AluJo SINE Alu -25 287 2 335 285 160 50 chr2 157418151 157418351 -95838232 - MIR SINE MIR 0 262 41 213 323 48 0 chr2 157418436 157418498 -95838085 + L2 LINE L2 3027 3091 -181 1102 208 19 9 chr2 157418619 157418831 -95837752 - AluJb SINE Alu -15 297 84 2188 84 0 14 chr2 157422211 157422529 -95834054 - AluSg SINE Alu 0 314 1 759 198 55 22 chr2 157422874 157423056 -95833527 + MER5A DNA MER1_type 2 189 0 200 176 15 59 chr2 157423226 157423294 -95833289 + A-rich Low_complexity Low_complexity 2 66 0 23 20 0 61 chr2 157426829 157426878 -95829705 + AT_rich Low_complexity Low_complexity 1 46 0 2056 147 0 10 chr2 157428167 157428480 -95828103 - AluJb SINE Alu -2 310 1 1849 129 16 13 chr2 157429647 157429958 -95826625 + L1PB1 LINE L1 5840 6151 0 22 0 0 0 chr2 157430318 157430340 -95826243 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 157434260 157434282 -95822301 + AT_rich Low_complexity Low_complexity 1 22 0 236 240 83 49 chr2 157434906 157435013 -95821570 + LTR48B LTR ERV1 1 131 -411 1010 204 164 20 chr2 157435018 157435366 -95821217 + MER39 LTR ERV1 305 702 -5 22 56 0 0 chr2 157436953 157436989 -95819594 + AT_rich Low_complexity Low_complexity 1 36 0 4666 75 44 14 chr2 157437112 157437196 -95819387 - PABL_A LTR ERV1 0 660 580 1897 130 61 7 chr2 157437196 157437489 -95819094 - AluSc SINE Alu 0 309 1 4666 75 44 14 chr2 157437489 157438045 -95818538 - PABL_A LTR ERV1 -80 580 1 2117 97 26 35 chr2 157438065 157438407 -95818176 + MER44D DNA MER2_type 1 609 0 200 270 137 45 chr2 157439004 157439162 -95817421 + MER5A DNA MER1_type 4 171 -13 2484 70 0 13 chr2 157439601 157439915 -95816668 - AluY SINE Alu -1 310 1 1539 183 65 0 chr2 157439915 157440193 -95816390 - AluJb SINE Alu -13 299 3 754 154 8 0 chr2 157442971 157443088 -95813495 - FLAM_A SINE Alu -19 123 6 282 279 0 12 chr2 157443259 157443345 -95813238 - L1MD3 LINE L1 -10 7985 7901 1824 133 16 107 chr2 157445094 157445476 -95811107 - Tigger3(Golem) DNA MER2_type -1 3028 1 185 262 48 0 chr2 157445533 157445575 -95811008 + L2 LINE L2 2715 2758 -556 2309 171 29 2 chr2 157446775 157447226 -95809357 + L1MB4 LINE L1 5712 6174 -6 406 156 44 44 chr2 157447450 157447540 -95809043 + MER94 DNA DNA 1 90 -44 245 222 19 0 chr2 157448062 157448116 -95808467 + L2 LINE L2 3217 3271 -1 1997 141 3 0 chr2 157448164 157448455 -95808128 + AluJb SINE Alu 1 292 -20 294 204 97 10 chr2 157449231 157449334 -95807249 + HAL1b LINE L1 986 1097 -251 24 91 0 0 chr2 157450813 157450879 -95805704 + AT_rich Low_complexity Low_complexity 1 66 0 2371 109 0 3 chr2 157452236 157452547 -95804036 - AluSg SINE Alu 0 310 1 214 260 78 26 chr2 157454102 157454179 -95802404 - MIR SINE MIR -72 190 110 535 250 40 80 chr2 157455518 157455742 -95800841 - MIR SINE MIR -17 245 31 277 208 0 14 chr2 157455890 157455962 -95800621 - L1ME2 LINE L1 -1 6163 6093 425 178 93 0 chr2 157455973 157456080 -95800503 - L1MC4 LINE L1 -1 8041 7925 2111 108 14 3 chr2 157457116 157457411 -95799172 - AluSx SINE Alu -14 298 1 318 325 158 48 chr2 157457538 157457747 -95798836 + L2 LINE L2 3040 3271 -1 646 223 161 14 chr2 157458217 157458508 -95798075 + MLT1G1 LTR MaLR 262 595 0 2236 147 0 0 chr2 157458886 157459198 -95797385 - AluSx SINE Alu 0 312 1 495 243 37 0 chr2 157459201 157459337 -95797246 - MER20B DNA MER1_type -609 174 34 925 135 0 0 chr2 157459674 157459807 -95796776 - AluSg/x SINE Alu -8 302 170 211 298 24 0 chr2 157459835 157459919 -95796664 - MIR SINE MIR -86 122 37 1739 171 7 3 chr2 157463495 157463788 -95792795 - AluJb SINE Alu -18 294 1 24 32 0 0 chr2 157463961 157463992 -95792591 + AT_rich Low_complexity Low_complexity 1 31 0 258 230 112 62 chr2 157464119 157464280 -95792303 + MER58C DNA MER1_type 46 214 -1 194 323 32 0 chr2 157464313 157464375 -95792208 - MIR SINE MIR -62 146 83 24 53 0 0 chr2 157464920 157464958 -95791625 + AT_rich Low_complexity Low_complexity 1 38 0 687 192 70 52 chr2 157465962 157466191 -95790392 + L1MC3 LINE L1 7546 7778 -7 336 381 101 9 chr2 157467414 157467632 -95788951 - MIR SINE MIR -6 256 19 218 222 19 0 chr2 157468501 157468555 -95788028 + (TTTG)n Simple_repeat Simple_repeat 4 58 0 565 354 164 30 chr2 157469186 157470602 -95785981 + L2 LINE L2 1372 2977 -337 446 314 85 7 chr2 157471050 157471203 -95785380 - MIR3 SINE MIR -1 207 43 24 32 0 0 chr2 157471208 157471239 -95785344 + AT_rich Low_complexity Low_complexity 1 31 0 746 198 0 0 chr2 157471246 157471367 -95785216 - FLAM_A SINE Alu -12 121 1 221 274 168 11 chr2 157471611 157471706 -95784877 + MER5A DNA MER1_type 56 165 -24 287 261 78 100 chr2 157471949 157472129 -95784454 - MER5B DNA MER1_type 0 178 3 2390 89 3 0 chr2 157472875 157473178 -95783405 + AluSp SINE Alu 1 304 -9 2460 83 0 0 chr2 157474139 157474440 -95782143 - AluSq SINE Alu -12 301 1 2033 164 7 0 chr2 157477567 157477872 -95778711 + AluJo SINE Alu 1 307 -5 1753 164 7 30 chr2 157478221 157478526 -95778057 - AluJb SINE Alu -14 298 1 2205 105 0 3 chr2 157478529 157478850 -95777733 - AluSq SINE Alu 0 320 1 285 297 35 41 chr2 157479778 157479923 -95776660 - MIR SINE MIR -100 162 19 1675 177 13 7 chr2 157481860 157482159 -95774424 + AluJo SINE Alu 1 301 -11 1378 108 159 16 chr2 157482254 157482505 -95774078 + MER7A DNA MER2_type 62 346 0 251 297 59 10 chr2 157482748 157482849 -95773734 + MIR SINE MIR 107 212 -50 443 221 66 102 chr2 157483803 157484029 -95772554 - MER112 DNA MER1_type -33 227 10 1584 107 8 0 chr2 157484158 157484421 -95772162 + L1PA7 LINE L1 2353 2617 -3529 7262 66 26 1 chr2 157484421 157487535 -95769048 + L1PA7 LINE L1 2962 6153 -1 597 13 0 0 chr2 157489182 157489258 -95767325 - L1PA3 LINE L1 0 6155 6080 30 77 0 0 chr2 157490504 157490569 -95766014 + AT_rich Low_complexity Low_complexity 1 65 0 2148 139 3 0 chr2 157490593 157490895 -95765688 - AluSx SINE Alu -9 303 1 263 0 81 0 chr2 157491707 157491744 -95764839 + T-rich Low_complexity Low_complexity 2 41 0 2095 126 7 0 chr2 157491748 157492034 -95764549 - AluSx SINE Alu -24 288 1 212 335 151 28 chr2 157492275 157492454 -95764129 + L2 LINE L2 3069 3269 -3 21 57 0 0 chr2 157492751 157492786 -95763797 + AT_rich Low_complexity Low_complexity 1 35 0 206 83 83 42 chr2 157495274 157495322 -95761261 + A-rich Low_complexity Low_complexity 1 50 0 455 315 73 28 chr2 157497079 157497365 -95759218 - MER102b DNA MER1_type -30 311 13 1051 98 15 74 chr2 157498429 157498589 -95757994 - L1MA3 LINE L1 -2 6303 6156 2064 75 4 4 chr2 157498589 157498855 -95757728 - AluSp SINE Alu -15 298 33 1051 98 15 74 chr2 157498855 157498897 -95757686 - L1MA3 LINE L1 -149 6156 6113 2225 127 0 0 chr2 157499621 157499921 -95756662 + AluSx SINE Alu 1 300 -12 306 125 38 0 chr2 157500054 157500134 -95756449 + (TA)n Simple_repeat Simple_repeat 2 84 0 2075 112 10 17 chr2 157500135 157500431 -95756152 - AluSx SINE Alu -18 294 1 25 31 0 0 chr2 157500438 157500470 -95756113 + AT_rich Low_complexity Low_complexity 1 32 0 292 374 20 7 chr2 157500472 157500619 -95755964 + MIR SINE MIR 47 195 -67 233 263 96 106 chr2 157501436 157501548 -95755035 - L1M4 LINE L1 -1880 4266 4154 2403 78 0 3 chr2 157501548 157501854 -95754729 - AluY SINE Alu -5 306 2 233 263 96 106 chr2 157501854 157502270 -95754313 - L1M4 LINE L1 -1992 4154 3743 1734 166 0 28 chr2 157502304 157502621 -95753962 - AluJo SINE Alu 0 309 1 28 61 0 0 chr2 157503615 157503664 -95752919 + AT_rich Low_complexity Low_complexity 1 49 0 365 80 53 0 chr2 157504024 157504099 -95752484 + (TA)n Simple_repeat Simple_repeat 2 80 0 2270 126 0 10 chr2 157504106 157504416 -95752167 - AluSx SINE Alu -5 307 1 443 300 96 82 chr2 157504676 157505164 -95751419 + L2 LINE L2 2659 3172 -100 2124 115 7 7 chr2 157505164 157505460 -95751123 - AluSg SINE Alu -14 296 1 443 300 96 82 chr2 157505460 157505561 -95751022 + L2 LINE L2 3172 3270 -2 1612 108 56 4 chr2 157505988 157506219 -95750364 + AluSx SINE Alu 30 272 -40 1014 104 0 0 chr2 157506219 157506373 -95750210 + (GGAA)n Simple_repeat Simple_repeat 1 154 0 2247 123 3 0 chr2 157506381 157506689 -95749894 + AluSx SINE Alu 1 309 -3 2351 99 0 6 chr2 157507574 157507887 -95748696 - AluSx SINE Alu -1 311 1 39 22 0 0 chr2 157507889 157507935 -95748648 + AT_rich Low_complexity Low_complexity 1 46 0 34 96 0 0 chr2 157509273 157509377 -95747206 + AT_rich Low_complexity Low_complexity 1 104 0 244 324 0 0 chr2 157511584 157511652 -95744931 - MIR SINE MIR 0 262 195 350 221 13 0 chr2 157511719 157511796 -95744787 - MIR SINE MIR -72 190 113 1798 100 3 91 chr2 157512276 157512605 -95743978 - AluSq SINE Alu -8 305 6 2023 198 27 17 chr2 157514230 157514596 -95741987 + MLT2D LTR ERVL 1 373 -41 249 57 0 0 chr2 157514596 157514631 -95741952 + (CA)n Simple_repeat Simple_repeat 2 36 0 2023 198 27 17 chr2 157514631 157514674 -95741909 + MLT2D LTR ERVL 373 414 0 1805 68 0 0 chr2 157515204 157515424 -95741159 + AluSp SINE Alu 90 309 -4 21 0 0 0 chr2 157515603 157515624 -95740959 + AT_rich Low_complexity Low_complexity 1 21 0 423 116 0 0 chr2 157515644 157515713 -95740870 + AluSp/q SINE Alu 243 311 -2 310 50 0 0 chr2 157516123 157516163 -95740420 - Alu SINE Alu -268 40 1 390 250 36 0 chr2 157516181 157516265 -95740318 + L2 LINE L2 3225 3311 -2 1488 172 26 22 chr2 157516678 157516946 -95739637 + AluJb SINE Alu 30 298 -14 2112 120 0 16 chr2 157617428 157617745 -95638838 - AluSx SINE Alu 0 312 1 345 296 41 56 chr2 157618154 157618350 -95638233 + L2 LINE L2 2923 3115 -157 2374 83 0 0 chr2 157618561 157618861 -95637722 - AluSg SINE Alu -10 300 1 2327 96 0 3 chr2 157618861 157619164 -95637419 - AluSx SINE Alu -10 302 1 1104 134 0 6 chr2 157619603 157619774 -95636809 - AluJb SINE Alu -9 303 134 2039 125 30 0 chr2 157619774 157620069 -95636514 - AluSx SINE Alu -8 304 1 2092 105 30 3 chr2 157620280 157620576 -95636007 + AluSq SINE Alu 1 304 -9 200 289 102 31 chr2 157620654 157620717 -95635866 + MIR SINE MIR 92 149 -113 2315 72 7 0 chr2 157620717 157621010 -95635573 - AluSp SINE Alu -18 295 1 200 289 102 31 chr2 157621010 157621074 -95635509 + MIR SINE MIR 149 228 -34 552 143 118 50 chr2 157622461 157622580 -95634003 + FLAM_C SINE Alu 1 127 -16 232 367 42 17 chr2 157622872 157622992 -95633591 + MIR SINE MIR 49 171 -91 2416 73 3 0 chr2 157623272 157623573 -95633010 + AluSq SINE Alu 6 307 -6 2127 99 0 7 chr2 157623583 157623877 -95632706 + AluSx SINE Alu 1 292 -20 256 306 12 12 chr2 157623920 157624005 -95632578 + MIR SINE MIR 28 112 -150 1362 169 4 16 chr2 157626179 157626427 -95630156 + AluJo SINE Alu 47 291 -21 2280 76 13 0 chr2 157626427 157626730 -95629853 + AluSx SINE Alu 1 307 -5 259 238 143 29 chr2 157628212 157628317 -95628266 + MIR SINE MIR 13 129 -133 2021 53 0 0 chr2 157629031 157629274 -95627309 + AluY SINE Alu 55 297 -14 1386 75 0 0 chr2 157629353 157629527 -95627056 - AluSg/x SINE Alu -14 296 123 1685 111 122 25 chr2 157629530 157629672 -95626911 - AluSx SINE Alu -6 306 179 2287 92 7 0 chr2 157629672 157629978 -95626605 - AluSp SINE Alu -5 308 1 1685 111 122 25 chr2 157629978 157630114 -95626469 - AluSx SINE Alu -133 179 1 60 37 0 0 chr2 157630139 157630220 -95626363 + AT_rich Low_complexity Low_complexity 1 81 0 803 107 50 8 chr2 157630237 157630358 -95626225 - FLAM_C SINE Alu -17 126 1 2287 87 7 0 chr2 157632538 157632838 -95623745 - AluSp SINE Alu -11 302 1 1853 147 43 10 chr2 157632847 157633146 -95623437 - AluJo SINE Alu -3 309 1 194 336 39 48 chr2 157633694 157633798 -95622785 + MIR SINE MIR 28 130 -132 2236 101 0 0 chr2 157634078 157634375 -95622208 - AluSg SINE Alu -13 297 1 192 172 21 32 chr2 157635089 157635182 -95621401 + (GCATG)n Simple_repeat Simple_repeat 5 96 0 282 263 20 33 chr2 157635239 157635391 -95621192 + (GCATG)n Simple_repeat Simple_repeat 1 150 0 660 260 21 0 chr2 157635956 157636148 -95620435 - MER20 DNA MER1_type -21 198 3 1680 166 21 0 chr2 157636461 157636751 -95619832 - AluJb SINE Alu -16 296 1 2139 119 0 25 chr2 157637535 157637855 -95618728 + AluSx SINE Alu 1 312 0 1381 180 0 97 chr2 157637862 157638212 -95618371 + AluYb8 SINE Alu 1 316 -2 765 194 56 25 chr2 157638313 157638473 -95618110 - FRAM SINE Alu -1 165 1 1753 178 0 7 chr2 157638501 157638788 -95617795 - AluJb SINE Alu -23 289 5 264 231 87 14 chr2 157638798 157638951 -95617632 + MLT1C LTR MaLR 161 347 -153 2311 89 7 0 chr2 157638953 157639256 -95617327 - AluSx SINE Alu -7 305 1 1286 119 0 43 chr2 157639635 157639845 -95616738 - AluSg/x SINE Alu -17 295 95 826 208 45 72 chr2 157639993 157640214 -95616369 + MER20 DNA MER1_type 5 219 0 602 49 12 0 chr2 157640245 157640327 -95616256 + (TCTA)n Simple_repeat Simple_repeat 3 85 0 314 237 37 22 chr2 157640350 157640418 -95616165 + (TCTA)n Simple_repeat Simple_repeat 4 70 -70 2212 100 0 3 chr2 157640418 157640717 -95615866 - AluSq SINE Alu -15 298 1 314 237 37 22 chr2 157640717 157640783 -95615800 + (TCTA)n Simple_repeat Simple_repeat 70 140 0 410 173 51 6 chr2 157640783 157640939 -95615644 + (TCCA)n Simple_repeat Simple_repeat 4 166 0 2114 88 46 3 chr2 157641012 157641297 -95615286 - AluSx SINE Alu -15 297 1 187 172 17 17 chr2 157641313 157641371 -95615212 + (TCCA)n Simple_repeat Simple_repeat 3 60 0 238 154 93 12 chr2 157641385 157641547 -95615036 + (TCCA)n Simple_repeat Simple_repeat 2 176 0 1867 149 3 0 chr2 157643431 157643753 -95612830 - AluSx SINE Alu 0 323 1 1829 174 0 0 chr2 157643755 157644048 -95612535 - AluJo SINE Alu -19 293 1 2204 93 0 3 chr2 157645019 157645332 -95611251 - AluSx SINE Alu 0 312 1 1057 70 56 0 chr2 157645343 157645485 -95611098 - AluSc SINE Alu -13 296 147 1281 127 41 0 chr2 157645490 157645687 -95610896 + AluSg/x SINE Alu 101 305 -5 1384 201 72 0 chr2 157645687 157645950 -95610633 - AluJo SINE Alu -30 282 1 2097 95 49 0 chr2 157646699 157646984 -95609599 + AluSx SINE Alu 1 299 -13 1360 136 8 49 chr2 157646991 157647234 -95609349 - AluJb SINE Alu -15 297 65 1215 132 48 0 chr2 157647239 157647428 -95609155 + AluSg/x SINE Alu 79 276 -34 263 163 0 0 chr2 157647504 157647547 -95609036 - Alu SINE Alu -259 43 1 2275 82 0 7 chr2 157647559 157647862 -95608721 - AluY SINE Alu -10 301 1 1557 170 54 4 chr2 157648011 157648288 -95608295 - AluJb SINE Alu -21 291 1 1767 165 0 14 chr2 157648292 157648467 -95608116 - AluJo SINE Alu 0 307 136 2058 116 0 42 chr2 157648467 157648778 -95607805 - AluSq SINE Alu -15 298 1 1767 165 0 14 chr2 157648778 157648913 -95607670 - AluJo SINE Alu -171 136 1 2288 109 0 0 chr2 157649186 157649497 -95607086 - AluSx SINE Alu -1 311 1 557 118 0 0 chr2 157649966 157650042 -95606541 + FLAM SINE Alu 43 118 -25 264 122 0 0 chr2 157650062 157650103 -95606480 + (A)n Simple_repeat Simple_repeat 1 41 0 208 292 0 0 chr2 157650111 157650176 -95606407 - L2 LINE L2 -14 3258 3194 225 204 0 0 chr2 157650242 157650291 -95606292 - L2 LINE L2 -30 3242 3194 2176 115 10 0 chr2 157650617 157650922 -95605661 + AluSx SINE Alu 2 309 -3 1212 103 17 17 chr2 157652063 157652244 -95604339 - AluSq SINE Alu 0 317 134 2499 49 3 0 chr2 157652244 157652550 -95604033 - AluY SINE Alu -4 307 1 1212 103 17 17 chr2 157652550 157652577 -95604006 - AluSq SINE Alu -182 135 109 507 257 116 49 chr2 157653319 157653603 -95602980 + LTR16A1 LTR ERVL 145 447 -10 2278 84 0 0 chr2 157654422 157654708 -95601875 + AluSx SINE Alu 1 286 -26 27 29 0 0 chr2 157654806 157654840 -95601743 + AT_rich Low_complexity Low_complexity 1 34 0 1906 96 4 8 chr2 157654980 157655240 -95601343 + AluSx SINE Alu 43 301 -11 1743 146 9 54 chr2 157655258 157655573 -95601010 + AluJo SINE Alu 3 303 -9 2143 124 0 3 chr2 157655575 157655910 -95600673 + AluSq SINE Alu 9 342 0 2220 78 13 16 chr2 157656994 157657302 -95599281 + AluSx SINE Alu 1 307 -5 2142 100 0 4 chr2 157657387 157657692 -95598891 - AluSg SINE Alu 0 304 1 1153 149 21 0 chr2 157657716 157657904 -95598679 - AluSg/x SINE Alu 0 312 121 2295 98 0 0 chr2 157657918 157658224 -95598359 + AluSx SINE Alu 1 306 -6 1072 176 57 19 chr2 157658384 157658594 -95597989 + MER20 DNA MER1_type 1 218 -1 2067 104 20 3 chr2 157658596 157658894 -95597689 - AluSx SINE Alu -9 303 1 754 191 0 0 chr2 157659192 157659323 -95597260 - FLAM_C SINE Alu -1 132 2 1604 160 12 0 chr2 157660002 157660258 -95596325 + AluJo SINE Alu 1 259 -53 186 43 0 0 chr2 157660262 157660285 -95596298 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 2184 110 0 0 chr2 157660436 157660726 -95595857 - AluSx SINE Alu -22 290 1 2272 72 0 59 chr2 157661184 157661309 -95595274 + AluSp SINE Alu 11 142 -171 2207 84 0 28 chr2 157661309 157661629 -95594954 + AluY SINE Alu 1 311 0 2272 72 0 59 chr2 157661629 157661823 -95594760 + AluSp SINE Alu 142 311 -2 1969 127 21 0 chr2 157662050 157662334 -95594249 - AluSx SINE Alu -14 298 9 1477 220 20 0 chr2 157662348 157662648 -95593935 - AluJo SINE Alu -4 308 3 219 103 0 0 chr2 157662665 157662704 -95593879 + (TTAA)n Simple_repeat Simple_repeat 1 39 0 2023 122 0 3 chr2 157662704 157662992 -95593591 - AluSg SINE Alu -23 287 1 1874 139 10 7 chr2 157662994 157663288 -95593295 - AluSx SINE Alu -16 296 2 2403 62 3 7 chr2 157663314 157663622 -95592961 + AluY SINE Alu 1 307 -4 1958 131 3 22 chr2 157664041 157664354 -95592229 + AluSq SINE Alu 1 307 -6 425 198 50 10 chr2 157664518 157664619 -95591964 + L1MB5 LINE L1 6029 6133 -41 1633 152 65 0 chr2 157665698 157665974 -95590609 - AluJo SINE Alu -18 294 1 451 241 77 77 chr2 157666520 157666690 -95589893 - MER96B DNA MER1_type? 0 417 248 1690 159 3 45 chr2 157666794 157667102 -95589481 - AluJb SINE Alu -4 308 14 804 162 0 7 chr2 157667204 157667340 -95589243 + AluSg/x SINE Alu 161 295 -15 794 236 131 10 chr2 157667358 157667557 -95589026 - MER58A DNA MER1_type -1 223 1 1343 158 0 178 chr2 157667592 157667958 -95588625 - AluJo SINE Alu -1 301 1 965 144 7 0 chr2 157668013 157668159 -95588424 - FRAM SINE Alu -17 159 13 292 250 0 0 chr2 157668172 157668252 -95588331 - MER33 DNA MER1_type -91 272 193 1051 187 0 25 chr2 157668255 157668453 -95588130 + AluJo SINE Alu 40 232 -80 363 248 0 43 chr2 157668454 157668571 -95588012 - MER33 DNA MER1_type -177 147 36 2266 91 0 3 chr2 157668704 157669002 -95587581 + AluSx SINE Alu 1 297 -15 3774 133 12 31 chr2 157669297 157669718 -95586865 + L1MB3 LINE L1 5548 5954 -229 1890 145 30 3 chr2 157669718 157670014 -95586569 + AluJo SINE Alu 1 304 -8 3774 133 12 31 chr2 157670014 157670240 -95586343 + L1MB3 LINE L1 5954 6183 0 1098 129 0 0 chr2 157671168 157671323 -95585260 - AluJb SINE Alu -10 302 148 283 258 0 0 chr2 157671333 157671399 -95585184 + MER45 DNA AcHobo 1516 1581 0 2011 116 4 0 chr2 157671711 157671987 -95584596 - AluSx SINE Alu -35 277 1 1624 148 3 74 chr2 157672004 157672190 -95584393 - AluJo SINE Alu -11 301 146 2100 118 0 0 chr2 157672190 157672477 -95584106 - AluSx SINE Alu -25 287 1 1624 148 3 74 chr2 157672477 157672614 -95583969 - AluJo SINE Alu -166 146 1 1398 114 164 61 chr2 157672911 157673014 -95583569 + AluSg SINE Alu 1 92 -218 2176 93 10 0 chr2 157673014 157673336 -95583247 + AluSq SINE Alu 3 313 0 1398 114 164 61 chr2 157673336 157673512 -95583071 + AluSg SINE Alu 92 309 -1 809 259 5 5 chr2 157674060 157674257 -95582326 - MER58A DNA MER1_type -1 223 27 2017 134 0 0 chr2 157674788 157675099 -95581484 - AluSx SINE Alu 0 312 1 2050 105 0 71 chr2 157675396 157675721 -95580862 - AluSx SINE Alu -10 302 1 936 222 43 10 chr2 157675848 157676055 -95580528 - MER20 DNA MER1_type -1 218 5 1539 195 0 17 chr2 157676111 157676413 -95580170 - AluJo SINE Alu -15 297 1 1845 127 7 14 chr2 157676423 157676736 -95579847 - AluSx SINE Alu 0 311 1 1506 169 26 15 chr2 157677301 157677573 -95579010 - AluJo SINE Alu -37 275 1 1060 146 0 6 chr2 157677582 157677747 -95578836 - AluJb SINE Alu -16 296 133 251 174 0 0 chr2 157677925 157677971 -95578612 - FAM SINE Alu -32 147 102 2061 124 0 3 chr2 157677973 157678272 -95578311 - AluSx SINE Alu -12 300 3 1292 176 34 13 chr2 157678274 157678513 -95578070 - AluJo SINE Alu -66 246 3 1631 174 28 3 chr2 157678531 157678818 -95577765 + AluJb SINE Alu 2 295 -17 681 292 0 6 chr2 157678864 157679025 -95577558 - AluJo/FRAM SINE Alu -16 296 137 1687 138 3 38 chr2 157679026 157679316 -95577267 - AluJb SINE Alu -17 295 16 323 120 0 0 chr2 157679335 157679385 -95577198 - L1MB2 LINE L1 -44 6127 6078 1996 125 0 31 chr2 157680287 157680607 -95575976 - AluJb SINE Alu -2 310 1 980 98 0 109 chr2 157680644 157680854 -95575729 + AluSg/x SINE Alu 135 312 0 803 179 40 52 chr2 157680877 157681050 -95575533 - AluJb SINE Alu -30 282 112 1798 139 3 36 chr2 157681431 157681740 -95574843 - AluSx SINE Alu -13 299 1 382 145 0 0 chr2 157681740 157681809 -95574774 - L1M4 LINE L1 -684 5500 5432 2133 115 3 0 chr2 157681810 157682105 -95574478 - AluSx SINE Alu -15 297 2 1435 169 75 0 chr2 157682110 157682365 -95574218 - AluJb SINE Alu -26 286 13 703 58 0 0 chr2 157682469 157682555 -95574028 - AluS SINE Alu -226 87 2 2071 112 10 0 chr2 157683129 157683425 -95573158 - AluSx SINE Alu -13 299 1 479 211 0 0 chr2 157684571 157684661 -95571922 + L1M3 LINE L1 5514 5603 -580 2425 68 13 0 chr2 157684662 157684971 -95571612 + AluSp SINE Alu 1 313 0 284 119 0 11 chr2 157685015 157685067 -95571516 - AluSp SINE Alu -137 166 130 191 411 9 9 chr2 157685211 157685323 -95571260 - L3 LINE CR1 -1134 443 332 1676 140 15 0 chr2 157685741 157686006 -95570577 - AluSx SINE Alu -10 302 34 2095 128 0 3 chr2 157686035 157686348 -95570235 - AluSx SINE Alu 0 312 1 1870 150 27 0 chr2 157686410 157686710 -95569873 - AluJb SINE Alu -2 310 3 984 171 0 23 chr2 157686789 157686965 -95569618 - AluSg/x SINE Alu -4 308 137 1386 116 35 97 chr2 157686966 157687086 -95569497 - L1PA13 LINE L1 -9 6154 6028 2172 93 0 16 chr2 157687086 157687398 -95569185 - AluSc SINE Alu -2 307 1 1386 116 35 97 chr2 157687398 157687596 -95568987 - L1PA13 LINE L1 -135 6028 5856 235 169 0 155 chr2 157687889 157688108 -95568475 - AluSp SINE Alu -27 276 92 1536 106 0 0 chr2 157688208 157688415 -95568168 - AluSx SINE Alu -105 207 1 731 194 42 78 chr2 157688494 157688711 -95567872 + MER58B DNA MER1_type 9 217 -124 1645 157 40 0 chr2 157688899 157689173 -95567410 - L1MB5 LINE L1 -6 6168 5884 1555 147 50 7 chr2 157689178 157689457 -95567126 - AluJo SINE Alu -1 311 21 1543 174 20 69 chr2 157690217 157690251 -95566332 + MLT1A1 LTR MaLR 1 35 -330 2164 110 0 3 chr2 157690251 157690551 -95566032 - AluSx SINE Alu -13 299 1 1543 174 20 69 chr2 157690551 157690584 -95565999 + MLT1A1 LTR MaLR 35 68 -297 2397 61 7 0 chr2 157690584 157690881 -95565702 + AluSp SINE Alu 1 299 -14 1543 174 20 69 chr2 157690881 157691162 -95565421 + MLT1A1 LTR MaLR 68 333 -32 1173 113 28 276 chr2 157691162 157691265 -95565318 + MER7A DNA MER2_type 1 128 -2910 342 45 0 0 chr2 157691265 157691309 -95565274 + (TCCA)n Simple_repeat Simple_repeat 1 44 0 2262 90 3 0 chr2 157691313 157691612 -95564971 - AluSp SINE Alu -13 300 1 1173 113 28 276 chr2 157691612 157691626 -95564957 + MER7A DNA MER2_type 131 147 -2891 1679 159 26 4 chr2 157691626 157691897 -95564686 - AluJb SINE Alu -23 289 13 1173 113 28 276 chr2 157691897 157691919 -95564664 + MER7A DNA MER2_type 147 173 -2865 778 240 0 0 chr2 157691919 157692069 -95564514 - FRAM SINE Alu -16 150 1 1173 113 28 276 chr2 157692069 157692178 -95564405 + MER7A DNA MER2_type 173 93 -2945 2052 115 0 16 chr2 157692178 157692483 -95564100 - AluSx SINE Alu -12 300 1 1173 113 28 276 chr2 157692483 157692686 -95563897 + MER7A DNA MER2_type 92 344 -2 854 149 7 32 chr2 157692796 157692950 -95563633 + AluJ SINE Alu 2 151 -161 4297 59 6 0 chr2 157693164 157693692 -95562891 + L1PA7 LINE L1 5624 6154 0 907 168 26 0 chr2 157693692 157693847 -95562736 + AluJ SINE Alu 137 295 -17 180 0 0 0 chr2 157694171 157694191 -95562392 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1284 191 7 48 chr2 157694200 157694355 -95562228 - AluJo SINE Alu -30 282 143 2227 71 20 0 chr2 157694355 157694650 -95561933 - AluSp SINE Alu -12 301 1 1284 191 7 48 chr2 157694650 157694788 -95561795 - AluJo SINE Alu -169 143 1 370 245 21 11 chr2 157694906 157695000 -95561583 - MER20 DNA MER1_type -26 193 99 21 36 0 0 chr2 157696320 157696348 -95560235 + AT_rich Low_complexity Low_complexity 1 28 0 989 166 23 26 chr2 157696369 157696534 -95560049 + L1MA8 LINE L1 5595 5756 -544 2238 107 0 0 chr2 157696534 157696832 -95559751 + AluSx SINE Alu 1 298 -14 989 166 23 26 chr2 157696832 157696909 -95559674 + L1MA8 LINE L1 5756 5832 -468 1650 147 18 0 chr2 157697013 157697285 -95559298 + AluSx SINE Alu 34 310 -2 772 189 71 0 chr2 157697300 157697469 -95559114 + L1MA8 LINE L1 5814 5994 -297 750 205 18 18 chr2 157697432 157697603 -95558980 + L1PB4 LINE L1 5990 6149 -2 * 2360 57 0 7 chr2 157697606 157697902 -95558681 + AluY SINE Alu 1 294 -17 1823 132 18 7 chr2 157697918 157698199 -95558384 + AluJo SINE Alu 6 289 -23 1747 151 63 0 chr2 157698201 157698519 -95558064 + L1MA8 LINE L1 5954 6291 0 2162 75 7 0 chr2 157698521 157698836 -95557747 + AluY SINE Alu 1 317 0 234 29 29 0 chr2 157698802 157698840 -95557743 + (TAAA)n Simple_repeat Simple_repeat 2 37 -340 2248 97 7 0 chr2 157698840 157699150 -95557433 + AluSx SINE Alu 1 312 0 234 29 29 0 chr2 157699150 157699177 -95557406 + (TAAA)n Simple_repeat Simple_repeat 37 377 0 2154 119 3 3 chr2 157699181 157699492 -95557091 + AluSx SINE Alu 1 311 -1 1562 146 43 50 chr2 157699499 157699801 -95556782 + AluJb SINE Alu 1 300 -12 2266 80 0 0 chr2 157700098 157700386 -95556197 + AluSx SINE Alu 1 288 -24 2072 170 62 5 chr2 157700388 157700776 -95555807 - MER31A LTR ERV1 -13 472 63 1705 138 33 49 chr2 157700964 157701121 -95555462 - AluSx SINE Alu -13 299 148 2490 30 0 13 chr2 157701121 157701421 -95555162 - AluY SINE Alu -15 296 1 1705 138 33 49 chr2 157701421 157701567 -95555016 - AluSx SINE Alu -164 148 1 1624 167 6 28 chr2 157701637 157701955 -95554628 + AluJo SINE Alu 1 311 -1 189 179 51 0 chr2 157702096 157702135 -95554448 - MIR SINE MIR -115 147 107 216 0 0 0 chr2 157702333 157702357 -95554226 + (TTG)n Simple_repeat Simple_repeat 1 24 0 1831 119 0 11 chr2 157702362 157702639 -95553944 - AluSx SINE Alu -38 274 1 1672 160 0 46 chr2 157703354 157703661 -95552922 - AluJo SINE Alu -19 293 1 218 288 15 15 chr2 157703747 157703813 -95552770 + MIR SINE MIR 81 146 -62 456 242 106 8 chr2 157703871 157704003 -95552580 - MER58B DNA MER1_type 0 341 197 2059 108 3 10 chr2 157704127 157704422 -95552161 + AluSx SINE Alu 1 293 -19 726 466 198 0 chr2 157704452 157704699 -95551884 + AluSg SINE Alu 1 296 -4 534 314 17 46 chr2 157704711 157704733 -95551850 + MER58B DNA MER1_type 102 123 -2297 2156 82 38 0 chr2 157704733 157704777 -95551806 + AluSg SINE Alu 5 46 -264 248 0 0 30 chr2 157704777 157704810 -95551773 + (TGGGGG)n Simple_repeat Simple_repeat 2 33 0 2156 82 38 0 chr2 157704810 157705056 -95551527 + AluSg SINE Alu 46 306 -4 534 314 17 46 chr2 157705056 157705272 -95551311 + MER58B DNA MER1_type 123 333 -8 1811 153 0 4 chr2 157706413 157706694 -95549889 - AluSx SINE Alu -32 280 1 228 302 54 40 chr2 157706726 157706875 -95549708 - L1M4 LINE L1 -3037 3109 2959 2218 76 42 0 chr2 157706933 157707222 -95549361 - AluSx SINE Alu -11 301 1 784 191 8 0 chr2 157707373 157707499 -95549084 - FLAM_A SINE Alu -6 127 1 667 149 0 19 chr2 157707524 157707631 -95548952 + FLAM_C SINE Alu 3 107 -36 252 0 0 0 chr2 157707731 157707759 -95548824 + (CA)n Simple_repeat Simple_repeat 1 28 0 376 372 76 16 chr2 157707759 157708009 -95548574 - L1M4 LINE L1 -3651 2495 2231 1447 179 33 0 chr2 157708068 157708370 -95548213 - AluJo SINE Alu 0 311 1 500 202 0 0 chr2 157708497 157708581 -95548002 - FLAM_A SINE Alu -58 84 1 1887 97 82 0 chr2 157708660 157708927 -95547656 - AluSx SINE Alu -23 289 1 1773 160 0 7 chr2 157709183 157709477 -95547106 - AluSx SINE Alu -16 296 5 180 0 0 0 chr2 157709720 157709740 -95546843 + (TA)n Simple_repeat Simple_repeat 2 21 0 1930 153 0 0 chr2 157709942 157710243 -95546340 + AluJb SINE Alu 1 301 -11 336 232 12 24 chr2 157710275 157710357 -95546226 - FRAM/FAM SINE Alu -88 78 1 1832 138 28 14 chr2 157710520 157710811 -95545772 - AluJo SINE Alu -4 308 14 1127 128 0 109 chr2 157711104 157711237 -95545346 - AluJb SINE Alu -113 199 96 2129 114 10 0 chr2 157711237 157711545 -95545038 + AluY SINE Alu 1 311 0 1127 128 0 109 chr2 157711545 157711622 -95544961 - AluJb SINE Alu -216 96 12 237 270 112 0 chr2 157711978 157712067 -95544516 - L2 LINE L2 -339 2974 2876 * 328 305 34 0 chr2 157712033 157712151 -95544432 - MIR SINE MIR -128 134 13 21 36 0 0 chr2 157712368 157712396 -95544187 + AT_rich Low_complexity Low_complexity 1 28 0 1958 111 10 27 chr2 157712398 157712723 -95543860 + AluSx SINE Alu 1 320 0 21 0 0 0 chr2 157712725 157712746 -95543837 + AT_rich Low_complexity Low_complexity 1 21 0 784 127 8 0 chr2 157712746 157712864 -95543719 - FLAM_C SINE Alu -23 120 2 1070 213 9 5 chr2 157712972 157713183 -95543400 - MER20 DNA MER1_type -3 216 5 2232 104 0 0 chr2 157713220 157713529 -95543054 - AluSx SINE Alu -3 309 1 2179 103 0 3 chr2 157715416 157715716 -95540867 + AluSx SINE Alu 1 299 -13 939 244 10 19 chr2 157715801 157716010 -95540573 - MER58A DNA MER1_type -17 207 1 968 146 0 0 chr2 157716041 157716192 -95540391 + FRAM SINE Alu 5 155 -21 25 0 0 0 chr2 157716240 157716265 -95540318 + AT_rich Low_complexity Low_complexity 1 25 0 784 243 24 9 chr2 157717031 157717241 -95539342 + MER20 DNA MER1_type 1 213 -6 1876 172 10 26 chr2 157719137 157719527 -95537056 + L1MB5 LINE L1 5743 6126 -48 1037 170 0 0 chr2 157719527 157719692 -95536891 + AluJo SINE Alu 61 225 -87 251 268 37 12 chr2 157719924 157720006 -95536577 + MIR SINE MIR 100 183 -79 1377 259 82 2 chr2 157721250 157721678 -95534905 + MLT1C LTR MaLR 6 467 0 241 83 0 0 chr2 157721687 157721723 -95534860 + MIR SINE MIR 110 145 -63 2225 85 3 14 chr2 157721825 157722170 -95534413 + AluY SINE Alu 1 311 0 2153 97 17 3 chr2 157722177 157722475 -95534108 + AluSx SINE Alu 1 302 -10 812 179 12 6 chr2 157722658 157722826 -95533757 + MER20 DNA MER1_type 49 217 -2 1250 236 69 27 chr2 157723255 157723662 -95532921 + MLT1C LTR MaLR 1 424 -43 1584 158 13 40 chr2 157723937 157724103 -95532480 - AluJo SINE Alu -11 301 145 2275 98 3 0 chr2 157724103 157724409 -95532174 - AluSq SINE Alu -6 307 1 1584 158 13 40 chr2 157724409 157724540 -95532043 - AluJo SINE Alu -167 145 12 1667 202 85 7 chr2 157724683 157725119 -95531464 + L1MC2 LINE L1 5869 6338 -6 828 158 0 20 chr2 157725136 157725282 -95531301 + FLAM_C SINE Alu 1 143 0 2298 176 29 49 chr2 157725773 157725790 -95530793 + MER74A LTR ERVL 1 17 -541 2305 95 0 0 chr2 157725790 157726086 -95530497 - AluSx SINE Alu -14 298 3 2298 176 29 49 chr2 157726086 157726619 -95529964 + MER74A LTR ERVL 17 540 -18 591 141 111 0 chr2 157726637 157726736 -95529847 - FRAM SINE Alu -16 160 51 529 194 11 0 chr2 157826761 157826854 -95429729 + Tigger7 DNA MER2_type 2493 2586 -1 1159 241 23 4 chr2 157826934 157827195 -95429388 - L1ME1 LINE L1 -8 6158 5893 2214 224 38 28 chr2 157827213 157827789 -95428794 - L1ME1 LINE L1 -5 6161 5580 1401 176 55 36 chr2 157827794 157827890 -95428693 - L1ME1 LINE L1 -743 5403 5310 1873 158 0 3 chr2 157827890 157828181 -95428402 - AluJb SINE Alu -16 296 7 1401 176 55 36 chr2 157828181 157828325 -95428258 - L1ME1 LINE L1 -836 5310 5170 1531 151 76 16 chr2 157828325 157828642 -95427941 - MER44D DNA MER2_type -1 608 3 1401 176 55 36 chr2 157828642 157828838 -95427745 - L1ME1 LINE L1 -976 5170 4963 298 244 130 35 chr2 157829072 157829187 -95427396 + L2 LINE L2 3182 3307 -6 849 199 18 21 chr2 157829512 157829720 -95426863 + L1MA7 LINE L1 5800 5931 -360 33 25 0 0 chr2 157831925 157831965 -95424618 + AT_rich Low_complexity Low_complexity 1 40 0 244 257 114 57 chr2 157831967 157832142 -95424441 + MIR SINE MIR 66 250 -12 22 0 0 0 chr2 157832189 157832211 -95424372 + AT_rich Low_complexity Low_complexity 1 22 0 254 356 138 18 chr2 157832393 157832668 -95423915 - L2 LINE L2 -49 3223 2916 677 200 0 0 chr2 157833399 157833519 -95423064 + FLAM_A SINE Alu 1 120 -13 441 0 0 0 chr2 157833522 157833571 -95423012 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 207 0 0 0 chr2 157834537 157834560 -95422023 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2031 137 58 0 chr2 157834566 157834909 -95421674 - L1PA16 LINE L1 -9 6157 5795 1376 199 30 11 chr2 157835141 157835412 -95421171 - AluJo SINE Alu -4 308 33 447 264 123 43 chr2 157836109 157836386 -95420197 + L1ME4a LINE L1 5558 5856 -265 2542 142 138 14 chr2 157836435 157836654 -95419929 - MER7C DNA MER2_type -2429 599 408 626 175 0 9 chr2 157836654 157836768 -95419815 + L1PB4 LINE L1 6037 6149 -7 2542 142 138 14 chr2 157836768 157837034 -95419549 - MER7C DNA MER2_type -2620 408 54 29 60 0 0 chr2 157837919 157837969 -95418614 + AT_rich Low_complexity Low_complexity 1 50 0 24 0 0 0 chr2 157838398 157838422 -95418161 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr2 157838662 157838684 -95417899 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr2 157844696 157844727 -95411856 + AT_rich Low_complexity Low_complexity 1 31 0 1362 176 36 85 chr2 157846146 157846452 -95410131 + AluJo SINE Alu 1 291 -21 21 57 0 0 chr2 157846607 157846642 -95409941 + AT_rich Low_complexity Low_complexity 1 35 0 2192 112 3 16 chr2 157847176 157847488 -95409095 - AluSg SINE Alu -2 308 1 1803 153 7 3 chr2 157848164 157848471 -95408112 - AluJo SINE Alu 0 308 1 329 296 157 0 chr2 157848953 157849068 -95407515 - L2 LINE L2 -1 3271 3139 284 305 86 0 chr2 157851004 157851109 -95405474 + MER81 DNA DNA 1 114 0 229 26 26 26 chr2 157851384 157851423 -95405160 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1673 178 0 7 chr2 157851426 157851707 -95404876 - AluJb SINE Alu -30 282 4 189 0 0 0 chr2 157851955 157851976 -95404607 + (A)n Simple_repeat Simple_repeat 1 21 0 1450 162 68 0 chr2 157851984 157852240 -95404343 + AluJb SINE Alu 32 303 0 1572 158 15 8 chr2 157852465 157852724 -95403859 + AluSx SINE Alu 5 265 -47 473 291 122 47 chr2 157854025 157854120 -95402463 + MLT1H1 LTR MaLR 1 87 -468 948 184 81 126 chr2 157854120 157854429 -95402154 - AluJo SINE Alu -6 296 2 473 291 122 47 chr2 157854429 157854546 -95402037 + MLT1H1 LTR MaLR 87 229 -326 254 200 16 151 chr2 157854567 157854693 -95401890 + MLT1H1 LTR MaLR 435 549 -6 898 231 42 9 chr2 157854710 157854926 -95401657 + MER58A DNA MER1_type 1 223 -1 2395 98 10 0 chr2 157854989 157855295 -95401288 - AluSg SINE Alu -1 309 1 330 188 78 0 chr2 157855409 157855473 -95401110 + MIR3 SINE MIR 89 157 -51 384 238 98 8 chr2 157855548 157855670 -95400913 - MER103 DNA DNA -22 144 12 312 273 26 0 chr2 157856571 157856648 -95399935 + LTR16B LTR ERVL 386 464 0 625 281 84 29 chr2 157856935 157857173 -95399410 + MIR SINE MIR 12 262 0 212 287 241 0 chr2 157857199 157857307 -95399276 - L2 LINE L2 0 3313 3180 435 231 9 9 chr2 157857336 157857444 -95399139 - MIR SINE MIR -1 261 154 35 24 0 0 chr2 157860754 157860796 -95395787 + AT_rich Low_complexity Low_complexity 1 42 0 1858 167 0 26 chr2 157860857 157861162 -95395421 - AluSx SINE Alu -15 297 1 1805 177 0 0 chr2 157861275 157861563 -95395020 - AluJo SINE Alu -24 288 1 363 194 75 52 chr2 157862996 157863130 -95393453 - MER103 DNA DNA -27 139 3 339 240 80 30 chr2 157863519 157863619 -95392964 + L2 LINE L2 3205 3309 -4 835 122 0 0 chr2 157866111 157866226 -95390357 + AluSq/x SINE Alu 1 115 -198 238 306 56 9 chr2 157866658 157866766 -95389817 + L1ME LINE L1 5609 5721 -400 399 190 198 25 chr2 157867490 157867611 -95388972 - L2 LINE L2 0 3313 3172 2400 85 0 3 chr2 157869762 157870069 -95386514 + AluY SINE Alu 1 306 -5 22 94 0 0 chr2 157872349 157872413 -95384170 + AT_rich Low_complexity Low_complexity 1 64 0 21 36 0 0 chr2 157873592 157873620 -95382963 + AT_rich Low_complexity Low_complexity 1 28 0 984 169 36 0 chr2 157874859 157875025 -95381558 - AluJb SINE Alu -8 304 133 312 263 46 13 chr2 157875144 157875296 -95381287 + L1ME LINE L1 5575 5731 -390 1917 180 14 6 chr2 157876845 157877189 -95379394 - MER7A DNA MER2_type 0 346 2 279 284 39 79 chr2 157877714 157877841 -95378742 + MIR SINE MIR 110 231 -31 601 210 54 0 chr2 157878822 157878989 -95377594 - MER105 DNA DNA -1 203 28 1980 157 0 0 chr2 157880115 157880414 -95376169 + AluSx SINE Alu 1 299 -13 2217 92 3 7 chr2 157881163 157881457 -95375126 + AluSx SINE Alu 15 307 -5 21 0 0 0 chr2 157881583 157881604 -95374979 + AT_rich Low_complexity Low_complexity 1 21 0 203 255 0 0 chr2 157881969 157882016 -95374567 + MIR SINE MIR 93 139 -69 35 41 0 0 chr2 157882863 157882912 -95373671 + AT_rich Low_complexity Low_complexity 1 49 0 1970 139 10 10 chr2 157882919 157883220 -95373363 - AluJo SINE Alu -10 302 2 23 0 0 0 chr2 157884560 157884583 -95372000 + AT_rich Low_complexity Low_complexity 1 23 0 1202 153 7 143 chr2 157885918 157886225 -95370358 - AluJo SINE Alu -47 265 1 22 0 0 0 chr2 157886454 157886476 -95370107 + AT_rich Low_complexity Low_complexity 1 22 0 502 270 82 111 chr2 157887312 157887864 -95368719 + MLT1F LTR MaLR 1 536 -6 360 200 164 50 chr2 157887874 157888014 -95368569 + MIR SINE MIR 74 229 -33 1787 199 8 14 chr2 157888052 157888413 -95368170 + MER47B DNA MER2_type 59 417 -1 256 296 56 0 chr2 157888688 157888759 -95367824 + L2 LINE L2 3235 3309 -4 2089 108 3 18 chr2 157889069 157889355 -95367228 + AluSq SINE Alu 1 282 -31 1776 174 7 3 chr2 157889632 157889926 -95366657 - AluJb SINE Alu -17 295 1 557 210 12 48 chr2 157890575 157890742 -95365841 - MARNA DNA Mariner -98 488 328 1669 100 0 14 chr2 157891123 157891343 -95365240 + AluSg1 SINE Alu 1 217 -92 2321 120 0 0 chr2 157891727 157892035 -95364548 + AluSx SINE Alu 1 308 -4 971 150 24 18 chr2 157892968 157893135 -95363448 - AluSx SINE Alu -24 286 119 259 68 23 0 chr2 157893139 157893183 -95363400 - Alu SINE Alu -2 298 254 2289 97 0 7 chr2 157893187 157893487 -95363096 - AluSg SINE Alu -2 308 11 1083 82 0 20 chr2 157893515 157893661 -95362922 - AluSx SINE Alu -169 143 1 184 313 88 12 chr2 157894403 157894483 -95362100 + L2 LINE L2 2439 2524 -790 243 359 19 10 chr2 157894491 157894594 -95361989 + L2 LINE L2 3169 3272 0 1206 236 93 33 chr2 157894820 157895419 -95361164 - LTR41 LTR ERVL -11 762 41 1521 181 25 6 chr2 157895437 157895751 -95360832 + MER47A DNA MER2_type 47 366 0 309 51 0 0 chr2 157895828 157895867 -95360716 + (TAA)n Simple_repeat Simple_repeat 1 39 0 399 307 129 6 chr2 157896160 157896323 -95360260 + MIR SINE MIR 14 196 -66 428 208 77 15 chr2 157896402 157896532 -95360051 + L2 LINE L2 3170 3307 -6 280 301 82 48 chr2 157896686 157896820 -95359763 + MIR SINE MIR 41 182 -80 198 0 0 0 chr2 157896820 157896842 -95359741 + (TAAAA)n Simple_repeat Simple_repeat 5 26 0 280 301 82 48 chr2 157896842 157896853 -95359730 + MIR SINE MIR 182 191 -71 2185 110 3 0 chr2 157897193 157897494 -95359089 + AluSc SINE Alu 2 303 -6 205 216 0 0 chr2 157900344 157900381 -95356202 + L2 LINE L2 2715 2751 -563 188 86 29 0 chr2 157900951 157900986 -95355597 + (GA)n Simple_repeat Simple_repeat 2 37 0 827 326 44 39 chr2 157901038 157901594 -95354989 + L1MEc LINE L1 35 586 -5810 1413 98 20 82 chr2 157901594 157901780 -95354803 + MER30 DNA MER1_type 1 197 -33 1912 128 14 3 chr2 157901780 157902062 -95354521 + AluSx SINE Alu 1 285 -27 189 94 0 0 chr2 157902062 157902094 -95354489 + (TTAA)n Simple_repeat Simple_repeat 3 34 0 1413 98 20 82 chr2 157902094 157902151 -95354432 + MER30 DNA MER1_type 195 230 0 827 326 44 39 chr2 157902151 157902449 -95354134 + L1MEc LINE L1 586 894 -5502 288 273 81 0 chr2 157902449 157902548 -95354035 - MIR SINE MIR -149 113 7 193 333 15 0 chr2 157902739 157902805 -95353778 - MIR SINE MIR -12 250 184 341 99 37 74 chr2 157902828 157902909 -95353674 - AluSp/q SINE Alu 0 303 226 186 318 67 78 chr2 157903787 157903966 -95352617 - MIR3 SINE MIR -31 177 1 2139 134 0 13 chr2 157904170 157904477 -95352106 - AluSx SINE Alu -8 304 2 316 292 102 30 chr2 157905721 157905898 -95350685 + MIR SINE MIR 24 210 -52 2453 93 3 0 chr2 157906889 157907201 -95349382 - AluSp SINE Alu 0 313 1 217 329 175 15 chr2 157908501 157908638 -95347945 + L3 LINE CR1 1415 1573 -4 328 248 198 8 chr2 157908774 157908895 -95347688 + MLT1J1 LTR MaLR 23 166 -280 314 179 15 15 chr2 157909027 157909094 -95347489 + MLT1J1 LTR MaLR 358 424 -22 225 229 21 62 chr2 157909722 157909818 -95346765 - MARNA DNA Mariner -24 562 471 294 29 0 0 chr2 157909888 157909923 -95346660 + (CA)n Simple_repeat Simple_repeat 2 36 0 32 26 0 0 chr2 157909971 157910010 -95346573 + AT_rich Low_complexity Low_complexity 1 39 0 368 186 0 14 chr2 157910916 157910986 -95345597 - L2 LINE L2 0 3313 3245 22 0 0 0 chr2 157914040 157914062 -95342521 + AT_rich Low_complexity Low_complexity 1 22 0 757 315 60 39 chr2 157914246 157914364 -95342219 - L2 LINE L2 -5 3308 3194 1362 154 17 9 chr2 157914364 157914597 -95341986 - MER46A DNA MER2_type 0 236 2 757 315 60 39 chr2 157914597 157914894 -95341689 - L2 LINE L2 -119 3194 2884 1919 164 83 0 chr2 157914914 157915299 -95341284 + MSTA LTR MaLR 1 417 -11 2187 120 17 0 chr2 157915300 157915599 -95340984 + AluSg SINE Alu 1 304 -6 6633 56 29 38 chr2 157916133 157917087 -95339496 - SVA Other Other -8 1378 433 404 18 0 18 chr2 157917104 157917161 -95339422 - SVA Other Other -520 866 811 465 154 11 80 chr2 157917764 157917952 -95338631 + (TTATA)n Simple_repeat Simple_repeat 1 175 0 429 138 28 39 chr2 157917973 157918154 -95338429 + (TA)n Simple_repeat Simple_repeat 1 179 0 308 274 0 12 chr2 157918191 157918275 -95338308 - L1MC4 LINE L1 -1346 6696 6614 1099 224 9 5 chr2 157918301 157918524 -95338059 - MER58A DNA MER1_type 0 224 1 212 184 0 0 chr2 157919313 157919351 -95337232 + (TA)n Simple_repeat Simple_repeat 2 39 0 751 218 115 6 chr2 157919567 157919682 -95336901 + AluJo SINE Alu 2 139 -173 279 0 0 0 chr2 157919682 157919713 -95336870 + (CA)n Simple_repeat Simple_repeat 2 32 0 751 218 115 6 chr2 157919713 157919754 -95336829 + AluJo SINE Alu 139 174 -138 1124 141 11 32 chr2 157919887 157920072 -95336511 + FRAM SINE Alu 1 176 0 253 326 61 20 chr2 157921289 157921436 -95335147 + L2 LINE L2 1470 1622 -1692 2184 93 3 39 chr2 157923013 157923323 -95333260 - AluSg SINE Alu -11 299 1 956 194 12 0 chr2 157923327 157923497 -95333086 - AluJ SINE Alu -4 308 137 2292 78 0 0 chr2 157925164 157925484 -95331099 + AluSg SINE Alu 1 320 0 2431 63 0 38 chr2 157925486 157925803 -95330780 + AluY SINE Alu 1 305 -6 292 325 86 0 chr2 157926302 157926419 -95330164 + MIR SINE MIR 47 173 -89 198 336 16 16 chr2 157926445 157926569 -95330014 - MIR SINE MIR -10 252 29 197 152 0 0 chr2 157926620 157926653 -95329930 + L2 LINE L2 3262 3294 -19 928 158 0 0 chr2 157927123 157927256 -95329327 - AluJ SINE Alu -169 133 1 221 185 31 31 chr2 157927922 157927987 -95328596 + (GTTTG)n Simple_repeat Simple_repeat 3 67 0 515 150 0 0 chr2 157928512 157928592 -95327991 + AluSg/x SINE Alu 217 296 -13 419 250 76 42 chr2 157928782 157928926 -95327657 + MIR SINE MIR 25 173 -89 759 213 59 6 chr2 157929091 157929310 -95327273 - L1MB7 LINE L1 0 6184 5946 1659 174 19 29 chr2 157929422 157929732 -95326851 + AluJb SINE Alu 1 307 -5 207 243 81 103 chr2 157929905 157930016 -95326567 + MIR SINE MIR 124 233 -29 964 143 45 108 chr2 157930016 157930239 -95326344 + MER3 DNA MER1_type 1 209 0 207 243 81 103 chr2 157930239 157930263 -95326320 + MIR SINE MIR 233 256 -6 2331 100 10 0 chr2 157930329 157930629 -95325954 + AluSx SINE Alu 1 303 -9 326 194 32 54 chr2 157931541 157931634 -95324949 - MIR SINE MIR -64 198 108 22 35 0 0 chr2 157932137 157932166 -95324417 + AT_rich Low_complexity Low_complexity 1 29 0 226 239 141 33 chr2 157933832 157933924 -95322659 + L2 LINE L2 3171 3272 0 693 285 97 65 chr2 157934110 157934384 -95322199 + L1M4 LINE L1 4665 4929 -1217 1784 203 0 0 chr2 157934384 157934684 -95321899 - AluSx SINE Alu -12 300 1 693 285 97 65 chr2 157934684 157935038 -95321545 + L1M4 LINE L1 4929 5313 -833 302 138 12 75 chr2 157935076 157935156 -95321427 + L1 LINE L1 3669 3743 -2403 971 162 7 7 chr2 157935164 157935318 -95321265 + FRAM SINE Alu 8 161 -15 5639 136 52 13 chr2 157935324 157936239 -95320344 + L1 LINE L1 3729 4690 -1456 450 0 0 0 chr2 157936239 157936289 -95320294 + (CA)n Simple_repeat Simple_repeat 1 50 0 5639 136 52 13 chr2 157936289 157936401 -95320182 + L1 LINE L1 4690 4796 -1350 442 244 0 0 chr2 157936461 157936539 -95320044 + FRAM/FAM SINE Alu 1 76 -100 233 228 0 0 chr2 157936762 157936819 -95319764 + (TA)n Simple_repeat Simple_repeat 1 57 0 225 143 86 57 chr2 157936913 157936983 -95319600 - MIR SINE MIR 0 262 191 1851 134 7 13 chr2 157936989 157937288 -95319295 - AluSq SINE Alu -16 297 1 421 256 128 17 chr2 157937945 157938125 -95318458 - MIR SINE MIR -51 211 12 508 292 64 6 chr2 157938833 157939004 -95317579 + MIR SINE MIR 34 214 -48 1882 163 37 3 chr2 157942126 157942426 -95314157 - AluJb SINE Alu -2 310 1 1682 189 20 0 chr2 157943176 157943472 -95313111 - AluJo SINE Alu -8 304 3 1849 146 7 17 chr2 157944375 157944670 -95311913 + AluSx SINE Alu 1 292 -20 219 200 0 40 chr2 157944828 157944878 -95311705 + L2 LINE L2 3219 3266 -6 265 355 107 0 chr2 157944997 157945118 -95311465 + L2 LINE L2 3126 3259 -13 2342 98 7 0 chr2 157945682 157945978 -95310605 - AluSx SINE Alu -14 298 1 1593 121 26 15 chr2 157948527 157948791 -95307792 - L1MD3 LINE L1 0 7995 7729 508 346 78 36 chr2 157949665 157949997 -95306586 + L3b LINE CR1 1102 1447 -136 267 104 0 0 chr2 157950218 157950266 -95306317 + (TA)n Simple_repeat Simple_repeat 1 48 0 2279 79 0 38 chr2 157950295 157950613 -95305970 + AluSx SINE Alu 5 310 -2 25476 126 54 17 chr2 157950614 157954627 -95301956 - L1PA8A LINE L1 -28 6418 2555 2271 99 0 3 chr2 157954627 157954931 -95301652 + AluY SINE Alu 1 303 -8 25476 126 54 17 chr2 157954931 157956704 -95299879 - L1PA8A LINE L1 -3891 2555 321 2275 109 0 13 chr2 157956704 157957016 -95299567 + AluSq SINE Alu 1 308 -5 25476 126 54 17 chr2 157957016 157957348 -95299235 - L1PA8A LINE L1 -6125 321 3 1134 236 0 5 chr2 157957897 157958117 -95298466 + MER20 DNA MER1_type 1 219 0 205 280 100 10 chr2 157958547 157958647 -95297936 + MIR SINE MIR 143 251 -11 2327 100 7 0 chr2 157958697 157958998 -95297585 + AluSx SINE Alu 1 303 -9 25 0 0 0 chr2 157959333 157959358 -95297225 + AT_rich Low_complexity Low_complexity 1 25 0 868 206 0 17 chr2 157960363 157960538 -95296045 - FRAM SINE Alu -4 172 1 403 212 37 138 chr2 157960630 157960819 -95295764 - MER96 DNA MER1_type? -5 170 1 180 0 0 0 chr2 157960993 157961013 -95295570 + (CAA)n Simple_repeat Simple_repeat 2 21 0 204 125 0 0 chr2 157961443 157961475 -95295108 + (TTC)n Simple_repeat Simple_repeat 2 33 0 1938 151 10 3 chr2 157961936 157962235 -95294348 + AluJo SINE Alu 1 301 -11 279 308 12 41 chr2 157962523 157962695 -95293888 + CT-rich Low_complexity Low_complexity 3 169 0 5727 133 72 9 chr2 157962847 157963186 -95293397 + Tigger3b DNA MER2_type 213 529 -2499 2201 99 0 19 chr2 157963186 157963499 -95293084 + AluSx SINE Alu 6 312 0 5727 133 72 9 chr2 157963499 157964118 -95292465 + Tigger3b DNA MER2_type 529 1231 0 1457 155 6 81 chr2 157965016 157965339 -95291244 + L1MC3 LINE L1 7479 7777 -8 323 301 110 18 chr2 157966081 157966244 -95290339 + L3 LINE CR1 852 1029 -548 * 414 270 54 60 chr2 157966243 157966495 -95290088 - MIR SINE MIR -10 252 3 268 351 56 35 chr2 157966531 157966816 -95289767 + L3 LINE CR1 1065 1355 -222 273 163 186 0 chr2 157966984 157967070 -95289513 + L1M4 LINE L1 5434 5535 -636 406 323 108 23 chr2 157967572 157967832 -95288751 - L2 LINE L2 -636 2678 2397 311 301 26 13 chr2 157968260 157968416 -95288167 - MER103 DNA DNA 0 166 9 318 308 33 42 chr2 157968612 157968732 -95287851 - MER5B DNA MER1_type -59 119 1 213 302 47 12 chr2 157968870 157968956 -95287627 + L2 LINE L2 3180 3268 -4 396 0 0 0 chr2 157969055 157969099 -95287484 + (CA)n Simple_repeat Simple_repeat 2 45 0 2182 106 3 23 chr2 157969189 157969492 -95287091 - AluSx SINE Alu -15 297 1 2356 159 69 21 chr2 157969649 157970115 -95286468 - L1MB7 LINE L1 -7 6177 5690 970 194 11 0 chr2 157970218 157970393 -95286190 - AluJo SINE Alu -22 290 114 185 186 34 68 chr2 157970518 157970577 -95286006 + MER5A DNA MER1_type 21 77 -112 * 299 277 261 0 chr2 157970547 157970666 -95285917 - MER5A DNA MER1_type -36 153 4 2163 116 0 42 chr2 157970813 157971123 -95285460 + AluSx SINE Alu 1 297 -15 4092 162 21 31 chr2 157971158 157971343 -95285240 + L1MB3 LINE L1 5417 5602 -581 2235 105 7 0 chr2 157971343 157971638 -95284945 + AluSx SINE Alu 1 297 -15 4092 162 21 31 chr2 157971638 157972229 -95284354 + L1MB3 LINE L1 5602 6183 0 294 210 30 90 chr2 157972353 157972453 -95284130 - MIR SINE MIR -64 198 105 2039 120 27 3 chr2 157972717 157973009 -95283574 + AluSx SINE Alu 1 299 -13 700 144 76 8 chr2 157973114 157973232 -95283351 - FLAM_C SINE Alu -16 127 2 2282 71 14 24 chr2 157973462 157973802 -95282781 + AluY SINE Alu 1 311 0 1886 189 20 23 chr2 157974014 157974254 -95282329 - MLT1D LTR MaLR -2 503 263 2180 108 150 26 chr2 157974254 157974635 -95281948 + MSTA LTR MaLR 1 428 0 1886 189 20 23 chr2 157974635 157974786 -95281797 - MLT1D LTR MaLR -242 263 113 673 189 8 8 chr2 157974806 157974928 -95281655 - FRAM SINE Alu -10 166 45 323 350 8 17 chr2 157975482 157975599 -95280984 + MIR SINE MIR 34 149 -59 245 132 0 19 chr2 157975770 157975823 -95280760 + (CATA)n Simple_repeat Simple_repeat 2 53 0 2308 52 0 0 chr2 157975847 157976117 -95280466 - AluY SINE Alu -7 304 35 202 176 27 40 chr2 157976179 157976253 -95280330 + (TTATA)n Simple_repeat Simple_repeat 5 77 0 320 242 0 0 chr2 157976255 157976317 -95280266 - FRAM/FAM SINE Alu -102 64 3 376 341 39 0 chr2 157976806 157976935 -95279648 + L2 LINE L2 3137 3270 -2 2302 266 111 16 chr2 157977446 157978295 -95278288 - L2 LINE L2 -641 2673 1745 1013 216 127 0 chr2 157978304 157978549 -95278034 + Charlie4 DNA MER1_type 18 293 -1668 392 254 88 9 chr2 157978608 157978722 -95277861 + MIR SINE MIR 20 142 -120 618 206 43 0 chr2 157978747 157978888 -95277695 + Charlie4 DNA MER1_type 1809 1955 -6 2288 269 59 9 chr2 157978889 157979569 -95277014 - L2 LINE L2 -1527 1787 1074 1205 154 65 5 chr2 157980414 157980615 -95275968 + AluJb SINE Alu 1 213 -99 757 221 84 22 chr2 157980858 157981084 -95275499 + MER112 DNA MER1_type 8 247 -13 467 299 112 37 chr2 157981180 157981752 -95274831 + L1MC4a LINE L1 4179 4793 -1353 1019 165 6 44 chr2 157982185 157982367 -95274216 - AluJo SINE Alu -137 175 1 260 257 23 22 chr2 157985291 157985384 -95271199 + HAL1b LINE L1 1185 6039 -78 484 304 13 27 chr2 157985646 157985870 -95270713 + L1MC4a LINE L1 5684 5904 -1904 190 203 16 16 chr2 157985899 157985963 -95270620 + (TA)n Simple_repeat Simple_repeat 1 64 0 50 59 0 0 chr2 157987288 157987373 -95269210 + AT_rich Low_complexity Low_complexity 1 85 0 811 175 47 12 chr2 157987596 157987767 -95268816 + MLT1C LTR MaLR 1 177 -213 1319 130 58 0 chr2 157987768 157987975 -95268608 + AluSg/x SINE Alu 83 301 -11 987 245 72 25 chr2 157987986 157988264 -95268319 + MLT1C LTR MaLR 177 467 0 558 94 0 59 chr2 157988264 157988349 -95268234 - MADE1 DNA Mariner 0 80 1 426 253 11 92 chr2 157988557 157988775 -95267808 - MIR SINE MIR -54 208 13 181 250 62 0 chr2 157989542 157989590 -95266993 - MIR SINE MIR -34 228 178 2409 82 0 0 chr2 157989686 157989980 -95266603 + AluSc SINE Alu 1 294 -15 383 315 45 25 chr2 157990357 157990557 -95266026 + MIR SINE MIR 20 223 -39 1015 335 158 31 chr2 157991049 157992617 -95263966 + L2 LINE L2 1479 3246 -26 343 376 106 16 chr2 157993879 157994182 -95262401 - LTR16C LTR ERVL -63 428 99 467 286 134 6 chr2 157996450 157996621 -95259962 - MIR SINE MIR -52 210 18 520 212 123 53 chr2 157997907 157998077 -95258506 - MIR SINE MIR -33 229 48 3243 176 29 26 chr2 157998746 157998809 -95257774 - L1MB5 LINE L1 0 6174 6113 1837 125 66 24 chr2 157998809 157999098 -95257485 + AluSx SINE Alu 1 301 -11 3243 176 29 26 chr2 157999098 157999653 -95256930 - L1MB5 LINE L1 -61 6113 5554 1992 121 30 23 chr2 157999963 158000268 -95256315 - AluSx SINE Alu -5 307 1 311 314 90 66 chr2 158000277 158000671 -95255912 + L2 LINE L2 2695 3105 -167 216 97 0 0 chr2 158000821 158000852 -95255731 + (A)n Simple_repeat Simple_repeat 1 31 0 281 138 9 184 chr2 158000880 158000989 -95255594 - MER102b DNA MER1_type -9 332 243 782 225 62 10 chr2 158001263 158001457 -95255126 - MIR SINE MIR 0 262 59 4488 159 16 1 chr2 158001562 158002290 -95254293 - L1PA16 LINE L1 -9 6157 5419 363 44 0 0 chr2 158002668 158002713 -95253870 + (TG)n Simple_repeat Simple_repeat 2 46 0 1345 174 104 0 chr2 158003120 158003361 -95253222 + AluJo SINE Alu 3 268 -44 2243 110 0 10 chr2 158003777 158004077 -95252506 - AluSx SINE Alu -15 297 1 413 256 31 44 chr2 158004531 158004691 -95251892 - MIR SINE MIR -57 205 48 198 103 0 0 chr2 158004944 158004973 -95251610 + (TG)n Simple_repeat Simple_repeat 2 30 0 384 276 61 84 chr2 158005912 158006131 -95250452 + MLT1J LTR MaLR 2 176 -274 2474 63 3 3 chr2 158006144 158006445 -95250138 + AluY SINE Alu 1 301 -10 342 0 0 0 chr2 158007467 158007505 -95249078 + (CA)n Simple_repeat Simple_repeat 1 38 0 338 250 14 61 chr2 158008853 158009001 -95247582 - L1ME4a LINE L1 0 6121 5981 480 249 73 23 chr2 158009202 158009379 -95247204 - L1ME4a LINE L1 -442 5679 5494 240 316 148 7 chr2 158009648 158009803 -95246780 + MER5B DNA MER1_type 2 178 0 25 0 0 0 chr2 158012229 158012254 -95244329 + AT_rich Low_complexity Low_complexity 1 25 0 1271 213 45 45 chr2 158012305 158012657 -95243926 - MLT1A1 LTR MaLR 0 365 14 2321 84 7 0 chr2 158013252 158013549 -95243034 - AluSg SINE Alu -11 299 1 1000 99 8 0 chr2 158013551 158013682 -95242901 - AluSq/x SINE Alu -181 132 1 1039 115 0 0 chr2 158013695 158013834 -95242749 - AluSg/x SINE Alu -20 290 152 701 181 69 9 chr2 158013970 158014108 -95242475 - FLAM_C SINE Alu 0 133 2 1600 69 5 10 chr2 158014681 158014906 -95241677 + AluY SINE Alu 82 305 0 685 87 0 22 chr2 158015581 158015673 -95240910 + AluJ/FRAM SINE Alu 214 303 -9 195 359 87 10 chr2 158015677 158015780 -95240803 + MIR SINE MIR 36 146 -62 1430 220 108 62 chr2 158016235 158016426 -95240157 + MLT1D LTR MaLR 1 182 -323 2469 55 0 0 chr2 158016426 158016716 -95239867 + AluY SINE Alu 1 290 -21 1430 220 108 62 chr2 158016716 158017005 -95239578 + MLT1D LTR MaLR 182 503 -2 2110 119 33 7 chr2 158017214 158017517 -95239066 + AluSx SINE Alu 1 311 -1 395 288 16 77 chr2 158017557 158017746 -95238837 + MIR SINE MIR 14 191 -64 307 270 16 95 chr2 158018683 158018809 -95237774 + MER5B DNA MER1_type 63 178 0 897 274 25 8 chr2 158019436 158019681 -95236902 + MIR SINE MIR 4 252 -10 394 359 42 14 chr2 158019697 158019909 -95236674 + L2 LINE L2 2297 2514 -800 668 255 135 10 chr2 158020169 158020369 -95236214 - MIR SINE MIR -24 238 14 2190 93 3 75 chr2 158020577 158020909 -95235674 + AluSq SINE Alu 1 308 -5 382 240 29 0 chr2 158023365 158023469 -95233114 - L1ME3A LINE L1 -5 6165 6059 1985 145 3 7 chr2 158024113 158024416 -95232167 + AluJo SINE Alu 1 302 -10 544 230 98 47 chr2 158024534 158024893 -95231690 + LTR33 LTR ERVL 86 492 -29 2544 72 0 0 chr2 158025535 158025839 -95230744 + AluY SINE Alu 1 304 -7 254 351 43 0 chr2 158025848 158025942 -95230641 + MIR SINE MIR 52 149 -59 377 306 75 46 chr2 158026175 158026290 -95230293 + L1ME4a LINE L1 5581 5691 -430 2445 84 10 3 chr2 158026290 158026598 -95229985 + AluSx SINE Alu 1 310 -2 377 306 75 46 chr2 158026598 158026854 -95229729 + L1ME4a LINE L1 5691 5963 -158 479 256 29 17 chr2 158027020 158027192 -95229391 - MER104 DNA MER2_type -4 176 3 23 0 0 0 chr2 158028089 158028112 -95228471 + AT_rich Low_complexity Low_complexity 1 23 0 399 224 105 53 chr2 158028619 158028771 -95227812 - MIR3 SINE MIR -30 178 19 393 53 0 28 chr2 158028981 158029052 -95227531 + Alu SINE Alu 248 300 0 189 0 0 0 chr2 158030109 158030130 -95226453 + (A)n Simple_repeat Simple_repeat 1 21 0 208 170 21 21 chr2 158031636 158031683 -95224900 + G-rich Low_complexity Low_complexity 3 49 0 284 297 9 45 chr2 158033017 158033128 -95223455 + MIR SINE MIR 40 146 -62 620 281 94 0 chr2 158036479 158036682 -95219901 + MIR SINE MIR 8 229 -33 252 268 216 39 chr2 158038238 158038469 -95218114 + L2 LINE L2 2695 2966 -348 221 290 14 43 chr2 158038542 158038611 -95217972 + L2 LINE L2 3156 3222 -50 184 248 28 138 chr2 158038974 158039119 -95217464 + L2 LINE L2 2910 3038 -234 746 276 118 9 chr2 158041914 158042229 -95214354 - L3 LINE CR1 -6 1571 1223 241 301 96 0 chr2 158042990 158043073 -95213510 + MIR3 SINE MIR 12 102 -106 336 328 24 16 chr2 158044646 158044771 -95211812 + MIR SINE MIR 25 150 -112 2311 109 0 0 chr2 158045380 158045682 -95210901 - AluSx SINE Alu -6 306 5 4659 46 6 40 chr2 158046322 158047394 -95209189 + MER11A LTR ERVK 1 1261 -5 312 309 54 57 chr2 158047418 158047716 -95208867 + L3 LINE CR1 632 928 -649 494 299 218 15 chr2 158047759 158048123 -95208460 + L3 LINE CR1 1076 1535 -42 1949 147 0 34 chr2 158048123 158048443 -95208140 - AluJo SINE Alu -3 309 1 494 299 218 15 chr2 158048443 158048490 -95208093 + L3 LINE CR1 1535 1571 -6 2025 140 0 0 chr2 158048613 158048906 -95207677 + AluSx SINE Alu 1 293 -19 1593 178 65 0 chr2 158049490 158049765 -95206818 + AluJb SINE Alu 1 293 -19 359 153 0 0 chr2 158049779 158049851 -95206732 + MIR SINE MIR 136 207 -55 737 163 116 20 chr2 158049853 158050000 -95206583 + FRAM SINE Alu 8 168 -8 224 213 82 0 chr2 158050025 158050086 -95206497 + MIR SINE MIR 197 262 0 208 280 0 0 chr2 158050086 158050136 -95206447 + (TTA)n Simple_repeat Simple_repeat 3 52 0 2252 101 3 3 chr2 158050150 158050446 -95206137 + AluSq SINE Alu 1 296 -17 300 191 274 0 chr2 158050465 158050549 -95206034 + MER81 DNA DNA 5 111 -3 275 212 109 129 chr2 158051413 158051606 -95204977 - MER5A DNA MER1_type 0 189 1 1621 150 27 14 chr2 158051883 158052177 -95204406 + AluSx SINE Alu 1 298 -14 2293 112 0 0 chr2 158052263 158052559 -95204024 + AluSx SINE Alu 1 296 -16 2290 73 7 3 chr2 158052954 158053241 -95203342 - AluSg SINE Alu -18 292 5 1037 267 50 7 chr2 158053382 158053663 -95202920 + MLT1I LTR MaLR 102 394 -15 454 346 87 0 chr2 158054655 158054863 -95201720 - MIR SINE MIR -29 233 8 352 304 55 44 chr2 158054951 158055132 -95201451 - MER5A DNA MER1_type 0 189 7 2218 93 13 3 chr2 158055241 158055543 -95201040 + AluY SINE Alu 1 305 -6 2341 91 14 0 chr2 158055647 158055944 -95200639 - AluSq SINE Alu -12 301 1 22 0 0 0 chr2 158056222 158056244 -95200339 + AT_rich Low_complexity Low_complexity 1 22 0 1312 212 3 17 chr2 158056332 158056620 -95199963 + AluJb SINE Alu 1 284 -18 258 81 0 0 chr2 158056621 158056658 -95199925 + (CA)n Simple_repeat Simple_repeat 2 38 0 332 218 11 0 chr2 158057312 158057399 -95199184 + (TGGA)n Simple_repeat Simple_repeat 3 90 0 2073 108 17 3 chr2 158058785 158059072 -95197511 + AluSc SINE Alu 1 291 -18 1365 139 14 170 chr2 158060748 158061166 -95195417 - THE1A LTR MaLR -2 353 1 2245 91 3 10 chr2 158061252 158061548 -95195035 - AluSq SINE Alu -19 294 1 1634 161 27 27 chr2 158061851 158062143 -95194440 + AluJo SINE Alu 1 292 -20 2393 105 0 0 chr2 158062587 158062893 -95193690 + AluSx SINE Alu 1 306 -6 1569 239 116 44 chr2 158063933 158064196 -95192387 + L2 LINE L2 1449 1692 -1622 2122 123 17 0 chr2 158064196 158064496 -95192087 - AluSx SINE Alu -7 305 1 1569 239 116 44 chr2 158064496 158064725 -95191858 + L2 LINE L2 1692 1994 -1320 2125 108 14 0 chr2 158064725 158065002 -95191581 - AluSx SINE Alu -14 298 18 1569 239 116 44 chr2 158065002 158065102 -95191481 + L2 LINE L2 1994 2085 -1229 878 244 86 22 chr2 158065277 158065428 -95191155 + LTR52 LTR ERVL 46 186 -235 1947 80 4 8 chr2 158065428 158065690 -95190893 + AluSg SINE Alu 44 304 -6 878 244 86 22 chr2 158065690 158065853 -95190730 + LTR52 LTR ERVL 186 380 -41 700 175 54 95 chr2 158066848 158067025 -95189558 + MLT1A2 LTR MaLR 1 160 -230 2499 84 0 3 chr2 158067025 158067334 -95189249 + AluSg SINE Alu 1 308 -2 700 175 54 95 chr2 158067334 158067426 -95189157 + MLT1A2 LTR MaLR 160 254 -136 2148 167 8 11 chr2 158067428 158067794 -95188789 + MLT1A1 LTR MaLR 1 365 0 3118 42 31 0 chr2 158068272 158068653 -95187930 - L1PA5 LINE L1 0 6154 5762 495 0 0 0 chr2 158068653 158068707 -95187876 + L1PA5 LINE L1 5731 5784 -370 478 214 97 0 chr2 158068953 158069056 -95187527 - MER81 DNA DNA -1 113 1 304 242 144 20 chr2 158069992 158070145 -95186438 - MIR3 SINE MIR -5 203 32 1674 166 51 14 chr2 158070495 158070790 -95185793 + AluJo SINE Alu 1 306 -6 214 332 24 26 chr2 158070846 158071035 -95185548 - L2 LINE L2 -297 3016 2825 2112 90 11 4 chr2 158073089 158073366 -95183217 + AluSp SINE Alu 1 279 -34 747 62 0 0 chr2 158073366 158073463 -95183120 + (TC)n Simple_repeat Simple_repeat 2 98 0 198 103 0 0 chr2 158073462 158073491 -95183092 + (TA)n Simple_repeat Simple_repeat 2 30 0 * 2598 149 42 15 chr2 158073676 158074110 -95182473 + L1MB2 LINE L1 5683 6132 -39 2013 138 17 0 chr2 158074110 158074408 -95182175 - AluSx SINE Alu -9 303 1 2598 149 42 15 chr2 158074408 158074444 -95182139 + L1MB2 LINE L1 6132 6166 -5 271 347 0 0 chr2 158074501 158074599 -95181984 + L3 LINE CR1 998 1095 -482 2427 78 0 0 chr2 158076945 158077241 -95179342 + AluSg1 SINE Alu 1 296 -13 2290 116 3 0 chr2 158078239 158078549 -95178034 - AluSx SINE Alu -1 311 1 439 262 63 8 chr2 158079680 158079806 -95176777 + L2 LINE L2 3180 3312 -1 26 0 0 0 chr2 158080486 158080512 -95176071 + AT_rich Low_complexity Low_complexity 1 26 0 4199 124 9 3 chr2 158080521 158081150 -95175433 + MER41B LTR ERV1 3 635 0 1652 176 15 4 chr2 158081154 158081426 -95175157 - AluJo SINE Alu -37 275 1 228 260 0 0 chr2 158081456 158081506 -95175077 - L1MC4 LINE L1 -1334 6708 6659 675 221 0 0 chr2 158081730 158081852 -95174731 + FLAM_A SINE Alu 1 122 -11 2384 94 3 0 chr2 158082016 158082323 -95174260 - AluSg SINE Alu -2 308 1 540 321 33 15 chr2 158082992 158083263 -95173320 + L1MC4a LINE L1 5652 5927 -1881 * 2022 150 3 0 chr2 158083023 158083336 -95173247 + L1MB3 LINE L1 5689 6002 -169 471 85 73 0 chr2 158083348 158083430 -95173153 + L1MB3 LINE L1 6096 6183 0 220 278 0 14 chr2 158083586 158083658 -95172925 + L2 LINE L2 3201 3271 -1 1078 164 38 52 chr2 158084747 158084767 -95171816 - MER20 DNA MER1_type -5 214 195 3995 166 15 61 chr2 158084767 158085417 -95171166 + LTR39 LTR ERV1 1 608 -175 1934 146 0 17 chr2 158085417 158085731 -95170852 + AluSx SINE Alu 1 309 0 3995 166 15 61 chr2 158085731 158085900 -95170683 + LTR39 LTR ERV1 608 783 0 1078 164 38 52 chr2 158085900 158086092 -95170491 - MER20 DNA MER1_type -24 195 5 411 340 6 19 chr2 158086495 158086657 -95169926 + MIR3 SINE MIR 43 202 -6 1273 183 119 58 chr2 158087276 158087620 -95168963 - MLT1A1 LTR MaLR 0 365 1 198 143 0 0 chr2 158087735 158087770 -95168813 + (TA)n Simple_repeat Simple_repeat 1 35 0 908 182 0 53 chr2 158087796 158087983 -95168600 + FRAM SINE Alu 1 176 0 180 0 0 0 chr2 158088349 158088369 -95168214 + (TCTCCC)n Simple_repeat Simple_repeat 4 23 0 1051 158 40 22 chr2 158088383 158088611 -95167972 + SVA Other Other 38 269 -1117 2274 84 37 0 chr2 158088812 158089110 -95167473 - AluSq SINE Alu 0 313 5 910 173 4 80 chr2 158089597 158089846 -95166737 - AluJb SINE Alu -82 230 1 313 136 0 17 chr2 158090194 158090253 -95166330 - L1M4 LINE L1 -351 5833 5776 1966 125 7 17 chr2 158090256 158090552 -95166031 + AluSg SINE Alu 1 293 -17 3245 204 89 50 chr2 158090580 158091079 -95165504 + MER21B LTR ERV1 12 490 -373 2020 149 0 3 chr2 158091079 158091381 -95165202 - AluJo SINE Alu -11 301 1 3245 204 89 50 chr2 158091381 158091642 -95164941 + MER21B LTR ERV1 490 809 -54 2714 26 3 0 chr2 158091642 158091946 -95164637 + AluY SINE Alu 1 305 -6 3245 204 89 50 chr2 158091946 158092002 -95164581 + MER21B LTR ERV1 809 861 -2 2771 166 49 9 chr2 158092007 158092566 -95164017 - L1M4 LINE L1 -402 5782 5207 448 286 0 7 chr2 158092567 158092707 -95163876 - AluSg/x SINE Alu -10 302 164 262 202 24 48 chr2 158092822 158092946 -95163637 + A-rich Low_complexity Low_complexity 1 121 0 1153 156 39 46 chr2 158093231 158093361 -95163222 + L1MB8 LINE L1 5899 6028 -150 1336 199 57 59 chr2 158093361 158093732 -95162851 - MLT1A2 LTR MaLR -4 370 1 1153 156 39 46 chr2 158093732 158093883 -95162700 + L1MB8 LINE L1 6028 6178 0 1776 158 23 23 chr2 158094071 158094381 -95162202 + AluJb SINE Alu 1 310 -2 829 207 0 0 chr2 158094415 158094560 -95162023 - FRAM SINE Alu -21 155 11 186 263 0 0 chr2 158095517 158095574 -95161009 + GA-rich Low_complexity Low_complexity 1 57 0 1902 114 72 14 chr2 158095690 158095980 -95160603 + AluSx SINE Alu 1 307 -5 311 281 166 24 chr2 158097148 158097442 -95159141 + MLT1J LTR MaLR 111 533 -82 2520 83 3 0 chr2 158097737 158098049 -95158534 + AluSq SINE Alu 1 313 0 1930 134 34 10 chr2 158098201 158098492 -95158091 + AluSx SINE Alu 3 300 -12 1331 146 90 34 chr2 158098570 158098837 -95157746 + AluJb SINE Alu 18 299 -13 481 255 133 46 chr2 158099270 158099533 -95157050 + MLT1I LTR MaLR 85 370 -39 21 36 0 0 chr2 158099577 158099605 -95156978 + AT_rich Low_complexity Low_complexity 1 28 0 1375 174 33 8 chr2 158099745 158099987 -95156596 + AluJb SINE Alu 1 248 -64 1776 275 97 28 chr2 158101886 158102496 -95154087 + L1M4b LINE L1 17 668 -6191 700 182 51 51 chr2 158102499 158102529 -95154054 + L1M4 LINE L1 4943 4972 -1174 2869 134 145 2 chr2 158102529 158102990 -95153593 + MER1A DNA MER1_type 1 527 0 700 182 51 51 chr2 158102990 158103135 -95153448 + L1M4 LINE L1 4971 5118 -1028 839 180 7 13 chr2 158103137 158103287 -95153296 + AluJb SINE Alu 122 270 -42 1219 174 42 0 chr2 158103287 158103499 -95153084 - AluJo SINE Alu -91 221 1 409 81 0 0 chr2 158103500 158103562 -95153021 + L1MB8 LINE L1 6112 6173 -5 838 255 13 4 chr2 158103572 158103811 -95152772 + L1ME LINE L1 4965 5205 -941 2245 100 7 3 chr2 158103861 158104161 -95152422 + AluY SINE Alu 1 301 -10 1118 206 12 85 chr2 158104291 158104621 -95151962 - MLT1A2 LTR MaLR -68 306 1 779 260 25 8 chr2 158104820 158105055 -95151528 - L1MEc LINE L1 -6123 273 35 23 0 0 0 chr2 158105515 158105538 -95151045 + AT_rich Low_complexity Low_complexity 1 23 0 419 217 33 33 chr2 158106706 158106826 -95149757 - L2 LINE L2 0 3313 3194 236 211 125 31 chr2 158107082 158107210 -95149373 + L1ME LINE L1 5789 5928 -193 1984 119 11 0 chr2 158107288 158107587 -95148996 - AluY SINE Alu 0 302 1 544 158 9 18 chr2 158108241 158108355 -95148228 + L1M4 LINE L1 5090 5202 -944 1282 139 16 0 chr2 158108356 158108550 -95148033 + AluSx SINE Alu 1 197 -115 355 100 83 0 chr2 158108824 158108884 -95147699 - L1MB5 LINE L1 -6 6168 6104 400 40 0 0 chr2 158108884 158108934 -95147649 - MADE1 DNA Mariner -30 50 1 2369 168 76 42 chr2 158108991 158109142 -95147441 - L1MB5 LINE L1 -270 5904 5760 2310 125 0 0 chr2 158109142 158109454 -95147129 - AluSx SINE Alu 0 312 1 2369 168 76 42 chr2 158109454 158109825 -95146758 - L1MB5 LINE L1 -414 5760 5359 2259 88 0 66 chr2 158109825 158110144 -95146439 - AluY SINE Alu -13 298 1 2369 168 76 42 chr2 158110144 158110185 -95146398 - L1MB5 LINE L1 -815 5359 5321 455 204 10 0 chr2 158110187 158110285 -95146298 - FLAM_A SINE Alu -13 129 31 1278 168 13 66 chr2 158110285 158110661 -95145922 - L1MB5 LINE L1 -836 5332 4885 2423 68 3 0 chr2 158111616 158111908 -95144675 + AluY SINE Alu 1 293 -18 1157 118 183 163 chr2 158113584 158113984 -95142599 - MSTA LTR MaLR -2 426 19 375 23 0 0 chr2 158115390 158115434 -95141149 + (TG)n Simple_repeat Simple_repeat 2 45 0 907 167 17 44 chr2 158115476 158115656 -95140927 - L1MB8 LINE L1 -122 6056 5882 1373 142 0 30 chr2 158115660 158115893 -95140690 - AluJo SINE Alu 0 312 87 2091 106 30 26 chr2 158116122 158116424 -95140159 - AluSx SINE Alu -9 303 1 2258 102 3 7 chr2 158116424 158116727 -95139856 - AluSp SINE Alu -11 302 1 22 0 0 0 chr2 158117531 158117553 -95139030 + AT_rich Low_complexity Low_complexity 1 22 0 356 167 60 0 chr2 158117646 158117730 -95138853 - L1MB4 LINE L1 0 6180 6092 1907 121 0 50 chr2 158118665 158118963 -95137620 + AluJo SINE Alu 17 299 -13 25 0 0 0 chr2 158119549 158119574 -95137009 + AT_rich Low_complexity Low_complexity 1 25 0 335 264 19 9 chr2 158119826 158119932 -95136651 - MLT1K LTR MaLR 0 588 482 306 179 71 0 chr2 158120691 158120747 -95135836 + MLT1G1 LTR MaLR 4 63 -532 1819 142 47 16 chr2 158120903 158120979 -95135604 - MER44D DNA MER2_type -1883 608 536 237 108 0 0 chr2 158120979 158121016 -95135567 + (TA)n Simple_repeat Simple_repeat 2 38 0 1819 142 47 16 chr2 158121016 158121257 -95135326 - MER44D DNA MER2_type -1955 536 11 270 0 0 0 chr2 158121569 158121599 -95134984 + (TG)n Simple_repeat Simple_repeat 2 31 0 1130 263 195 13 chr2 158121606 158122058 -95134525 + MLT1G1 LTR MaLR 48 581 -14 430 298 85 79 chr2 158122143 158122509 -95134074 - L2 LINE L2 -1 3271 2904 339 320 55 55 chr2 158122781 158122962 -95133621 + L2 LINE L2 3083 3263 -9 375 360 69 4 chr2 158123007 158123282 -95133301 - L3b LINE CR1 -125 1458 1166 180 0 0 0 chr2 158123822 158123842 -95132741 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1750 127 11 11 chr2 158123842 158124110 -95132473 - AluSx SINE Alu -33 279 12 2293 85 3 3 chr2 158124373 158124666 -95131917 + AluY SINE Alu 3 295 -16 22 0 0 0 chr2 158124781 158124803 -95131780 + AT_rich Low_complexity Low_complexity 1 22 0 329 188 12 0 chr2 158126895 158126980 -95129603 + GA-rich Low_complexity Low_complexity 3 88 0 232 115 0 39 chr2 158127048 158127100 -95129483 + (GGA)n Simple_repeat Simple_repeat 1 50 0 1327 189 20 36 chr2 158127360 158127662 -95128921 + AluJo SINE Alu 1 297 -15 9739 149 105 84 chr2 158127669 158128921 -95127662 + L1MC3 LINE L1 5320 6545 -1240 1851 141 7 14 chr2 158128921 158129218 -95127365 + AluJb SINE Alu 14 308 -4 9739 149 105 84 chr2 158129218 158129242 -95127341 + L1MC3 LINE L1 6545 6567 -1218 2225 119 3 0 chr2 158129242 158129545 -95127038 + AluSx SINE Alu 2 305 -7 2366 76 3 0 chr2 158129545 158129848 -95126735 + AluY SINE Alu 1 304 -7 9739 149 105 84 chr2 158129848 158130328 -95126255 + L1MC3 LINE L1 6567 7036 -749 235 217 78 52 chr2 158130328 158130443 -95126140 + MLT1F1 LTR MaLR 13 130 -437 9739 149 105 84 chr2 158130443 158130985 -95125598 + L1MC3 LINE L1 7036 7785 0 222 321 0 0 chr2 158130988 158131072 -95125511 - MIR3 SINE MIR -14 194 111 2411 88 0 3 chr2 158131328 158131634 -95124949 + AluSx SINE Alu 3 307 -5 1033 156 6 0 chr2 158132028 158132188 -95124395 + FRAM SINE Alu 5 165 -1 194 274 81 0 chr2 158132290 158132352 -95124231 + MIR3 SINE MIR 138 204 -4 443 216 21 10 chr2 158132427 158132524 -95124059 - MER8 DNA MER2_type -141 98 1 869 207 44 53 chr2 158133179 158133406 -95123177 + MLT1A2 LTR MaLR 32 256 -118 617 182 27 0 chr2 158133444 158133554 -95123029 - FLAM_A SINE Alu -29 113 1 685 202 0 0 chr2 158133556 158133670 -95122913 + MLT1A2 LTR MaLR 257 370 -4 2393 128 38 45 chr2 158133819 158134242 -95122341 - MSTB LTR MaLR -1 425 6 2326 96 0 3 chr2 158134505 158134798 -95121785 + AluSg SINE Alu 1 292 -18 505 180 197 8 chr2 158134954 158135076 -95121507 + MER5B DNA MER1_type 3 147 -31 1799 185 3 3 chr2 158135115 158135423 -95121160 - AluJb SINE Alu -4 308 1 233 195 0 0 chr2 158135463 158135504 -95121079 - MLT1I LTR MaLR -2 407 367 204 40 0 0 chr2 158135513 158135538 -95121045 + (CAA)n Simple_repeat Simple_repeat 2 26 0 2146 88 7 7 chr2 158135539 158135855 -95120728 + AluY SINE Alu 1 316 0 377 261 11 11 chr2 158135930 158136022 -95120561 - MLT1I LTR MaLR -163 246 155 1031 271 57 39 chr2 158136055 158136494 -95120089 - MLT1J LTR MaLR -64 447 1 781 311 57 37 chr2 158136812 158137175 -95119408 + L2 LINE L2 2515 2929 -384 1999 134 7 13 chr2 158137175 158137346 -95119237 - AluSx SINE Alu -9 303 133 2368 107 0 0 chr2 158137346 158137654 -95118929 - AluSg SINE Alu -2 308 1 1999 134 7 13 chr2 158137654 158137787 -95118796 - AluSx SINE Alu -179 133 1 781 311 57 37 chr2 158137787 158138084 -95118499 + L2 LINE L2 2929 3219 -94 2213 88 3 67 chr2 158138464 158138793 -95117790 + AluSg1 SINE Alu 1 308 -1 185 355 45 41 chr2 158139379 158139624 -95116959 + L2 LINE L2 2951 3196 -76 249 226 258 40 chr2 158139681 158139805 -95116778 + MIR SINE MIR 56 206 -56 412 325 13 0 chr2 158139979 158140136 -95116447 + (TGG)n Simple_repeat Simple_repeat 3 161 0 400 198 19 31 chr2 158140156 158140318 -95116265 + (ATGGTG)n Simple_repeat Simple_repeat 1 160 0 433 233 0 23 chr2 158140609 158140785 -95115798 + (TGG)n Simple_repeat Simple_repeat 1 172 0 231 227 0 0 chr2 158140802 158140868 -95115715 + (TGG)n Simple_repeat Simple_repeat 2 67 0 22 35 0 0 chr2 158141376 158141405 -95115178 + AT_rich Low_complexity Low_complexity 1 29 0 2372 85 0 29 chr2 158142101 158142417 -95114166 + AluY SINE Alu 1 307 -4 511 331 66 47 chr2 158142748 158143065 -95113518 + L2 LINE L2 2927 3249 -23 237 65 0 0 chr2 158143078 158143109 -95113474 + (TGAA)n Simple_repeat Simple_repeat 2 32 0 2125 124 7 0 chr2 158143984 158144275 -95112308 + AluSx SINE Alu 1 293 -19 2558 59 0 3 chr2 158144907 158145212 -95111371 + AluY SINE Alu 1 304 -7 263 386 9 9 chr2 158146580 158146803 -95109780 - HERV16 LTR ERVL -4138 930 727 455 321 105 35 chr2 158146833 158147388 -95109195 - HERV16 LTR ERVL -4421 575 13 425 284 50 21 chr2 158147396 158147537 -95109046 - LTR16C LTR ERVL -5 486 342 757 142 0 0 chr2 158147538 158147644 -95108939 + FLAM_C SINE Alu 2 107 -36 257 333 83 26 chr2 158147683 158147875 -95108708 - LTR16C LTR ERVL -130 361 159 7608 29 6 3 chr2 158147893 158148789 -95107794 - L1PA3 LINE L1 -4 6151 5254 223 238 0 79 chr2 158148944 158149133 -95107450 + T-rich Low_complexity Low_complexity 6 179 0 1170 252 57 46 chr2 158149629 158150096 -95106487 + MLT1E LTR MaLR 3 540 -53 207 267 0 0 chr2 158150356 158150401 -95106182 + (CA)n Simple_repeat Simple_repeat 2 46 0 2344 147 3 16 chr2 158150563 158150943 -95105640 + THE1C LTR MaLR 1 375 0 10045 119 48 12 chr2 158150943 158152468 -95104115 + THE1C-int LTR MaLR 1 1580 0 2198 127 30 19 chr2 158152468 158152839 -95103744 + THE1C LTR MaLR 1 375 0 277 359 56 7 chr2 158152845 158152987 -95103596 + L2 LINE L2 3117 3265 -7 230 211 70 0 chr2 158153363 158153434 -95103149 + L1ME4a LINE L1 5718 5793 -328 276 257 178 25 chr2 158153460 158153701 -95102882 + L1ME4a LINE L1 5839 6116 -5 1776 153 14 24 chr2 158153712 158154007 -95102576 + AluJo SINE Alu 1 292 -20 2211 106 0 0 chr2 158154415 158154738 -95101845 + AluSx SINE Alu 1 323 0 632 237 192 0 chr2 158155974 158156172 -95100411 - MIR SINE MIR -1 261 26 608 291 40 64 chr2 158156360 158156656 -95099927 - MER102a DNA MER1_type -11 319 31 358 237 11 21 chr2 158156911 158157004 -95099579 + Charlie7 DNA MER1_type 6 97 -2515 2391 73 0 7 chr2 158157078 158157367 -95099216 - AluSx SINE Alu -25 287 1 2038 108 4 4 chr2 158157818 158158087 -95098496 + AluSx SINE Alu 33 301 -11 831 199 48 0 chr2 158158445 158158591 -95097992 - FRAM SINE Alu -23 153 1 2965 44 0 3 chr2 158158979 158159339 -95097244 + L1P1 LINE L1 5292 5650 -505 332 217 31 54 chr2 158160668 158160786 -95095797 - FLAM_A SINE Alu -17 116 21 1979 108 14 11 chr2 158161804 158162091 -95094492 + AluSx SINE Alu 1 288 -24 264 59 0 0 chr2 158162093 158162127 -95094456 + (TA)n Simple_repeat Simple_repeat 2 35 0 394 318 31 16 chr2 158162309 158162438 -95094145 - L2 LINE L2 -5 3267 3137 2188 98 26 10 chr2 158162609 158162914 -95093669 - AluSx SINE Alu -2 310 1 525 321 67 42 chr2 158164412 158164492 -95092091 - L1ME3A LINE L1 -209 5961 5884 2203 112 3 3 chr2 158164492 158164787 -95091796 - AluSx SINE Alu -17 295 1 525 321 67 42 chr2 158164787 158164999 -95091584 - L1ME3A LINE L1 -286 5884 5679 2314 93 3 13 chr2 158164999 158165299 -95091284 - AluSg SINE Alu -11 299 3 525 321 67 42 chr2 158165299 158165364 -95091219 - L1ME3A LINE L1 -491 5679 5617 1881 133 65 0 chr2 158165364 158165643 -95090940 + AluSx SINE Alu 1 297 -15 525 321 67 42 chr2 158165643 158165928 -95090655 - L1ME3A LINE L1 -553 5617 5301 1669 143 0 12 chr2 158165977 158166235 -95090348 + AluJb SINE Alu 55 309 -3 473 277 16 62 chr2 158166472 158166714 -95089869 - L1ME3A LINE L1 -1053 5093 4863 2159 88 10 10 chr2 158167042 158167337 -95089246 + AluSg SINE Alu 1 295 -15 2025 135 0 46 chr2 158167561 158167888 -95088695 - AluSx SINE Alu 0 312 1 323 226 9 123 chr2 158169238 158169322 -95087261 - L1ME LINE L1 -665 5505 5413 1440 167 117 0 chr2 158169322 158169579 -95087004 - AluSx SINE Alu -25 287 1 323 226 9 123 chr2 158169579 158169706 -95086877 - L1ME LINE L1 -757 5413 5318 196 214 56 111 chr2 158169710 158169836 -95086747 - MIR SINE MIR -71 191 73 2160 104 0 20 chr2 158170058 158170356 -95086227 - AluY SINE Alu -19 292 1 2215 104 7 3 chr2 158170859 158171158 -95085425 + AluSp SINE Alu 1 300 -13 4283 104 99 66 chr2 158171244 158172349 -95084234 - MER11A LTR ERVK 0 1236 1 290 280 34 68 chr2 158172420 158172538 -95084045 + MIR SINE MIR 2 115 -147 1925 108 3 69 chr2 158172538 158172843 -95083740 + AluSx SINE Alu 1 285 -27 31 26 0 0 chr2 158172883 158172921 -95083662 + AT_rich Low_complexity Low_complexity 1 38 0 1580 157 4 30 chr2 158172942 158173210 -95083373 - AluJo SINE Alu -51 261 1 2128 125 3 7 chr2 158173377 158173681 -95082902 + AluSq SINE Alu 1 303 -10 5408 22 2 0 chr2 158173984 158174563 -95082020 - SVA Other Other 0 1386 807 1803 166 13 21 chr2 158174692 158175065 -95081518 + L1MB8 LINE L1 5809 6178 0 2150 114 0 26 chr2 158175072 158175380 -95081203 + AluSg SINE Alu 1 300 -10 638 105 97 32 chr2 158175562 158175686 -95080897 + FLAM_C SINE Alu 1 132 -11 1753 160 10 27 chr2 158175741 158176035 -95080548 - AluJo SINE Alu -23 289 1 1255 158 14 52 chr2 158176507 158176758 -95079825 + Tigger2a DNA MER2_type 1 332 -2386 2192 117 7 0 chr2 158176758 158177057 -95079526 + AluSx SINE Alu 1 301 -11 1255 158 14 52 chr2 158177057 158177166 -95079417 + Tigger2a DNA MER2_type 332 444 0 1669 176 38 0 chr2 158177865 158178154 -95078429 - AluJo SINE Alu 0 312 13 642 254 47 76 chr2 158178724 158178960 -95077623 - MIR SINE MIR 0 262 34 2324 98 0 3 chr2 158180262 158180559 -95076024 - AluSq SINE Alu -11 302 7 23 68 0 0 chr2 158181125 158181169 -95075414 + AT_rich Low_complexity Low_complexity 1 44 0 1684 176 11 0 chr2 158181194 158181472 -95075111 + AluJo SINE Alu 11 291 -21 2221 78 7 0 chr2 158181716 158181999 -95074584 + AluSc SINE Alu 1 285 -24 1058 121 179 5 chr2 158183844 158184034 -95072549 - MER47A DNA MER2_type -143 223 1 2147 70 21 0 chr2 158184662 158184947 -95071636 + AluSg SINE Alu 1 291 -19 2171 105 0 14 chr2 158185050 158185345 -95071238 - AluSx SINE Alu -21 291 1 236 279 23 12 chr2 158185387 158185473 -95071110 + L2 LINE L2 2883 2969 -303 220 280 8 127 chr2 158185943 158186061 -95070522 + L2 LINE L2 2980 3083 -189 1221 189 69 42 chr2 158186119 158186453 -95070130 + MER2 DNA MER2_type 2 344 0 830 182 7 0 chr2 158186612 158186766 -95069817 - FAM SINE Alu -9 40 1 227 333 50 50 chr2 158186773 158186893 -95069690 + L2 LINE L2 3150 3269 -3 897 272 102 68 chr2 158187637 158189010 -95067573 + L1MC/D LINE L1 4178 5633 -556 2007 143 23 0 chr2 158189010 158189311 -95067272 + AluSx SINE Alu 1 308 -4 897 272 102 68 chr2 158189311 158189514 -95067069 + L1MC/D LINE L1 5633 5827 -362 22 0 0 0 chr2 158189526 158189548 -95067035 + AT_rich Low_complexity Low_complexity 1 22 0 2171 112 13 7 chr2 158189733 158190037 -95066546 - AluSx SINE Alu -6 306 1 2310 100 3 0 chr2 158190089 158190390 -95066193 - AluSx SINE Alu -10 302 1 515 264 159 6 chr2 158191396 158191578 -95065005 - MIR SINE MIR -15 247 38 591 182 47 54 chr2 158192400 158192548 -95064035 + L2 LINE L2 3165 3311 -2 37 0 0 0 chr2 158193035 158193072 -95063511 + AT_rich Low_complexity Low_complexity 1 37 0 183 271 68 17 chr2 158194293 158194352 -95062231 - L3 LINE CR1 -1205 372 311 2144 125 0 0 chr2 158194731 158195019 -95061564 - AluSg SINE Alu -22 288 1 1417 99 0 0 chr2 158195167 158195359 -95061224 - AluSg/x SINE Alu -1 308 117 2592 137 55 48 chr2 158196246 158196941 -95059642 - MER51A LTR ERV1 -9 625 1 25 0 0 0 chr2 158197053 158197078 -95059505 + AT_rich Low_complexity Low_complexity 1 25 0 2299 86 0 13 chr2 158200120 158200424 -95056159 - AluSg SINE Alu -10 300 1 1708 174 3 17 chr2 158200427 158200726 -95055857 - AluJb SINE Alu -17 295 1 194 238 0 0 chr2 158200838 158200880 -95055703 + MIR3 SINE MIR 156 197 -11 21 36 0 0 chr2 158201049 158201077 -95055506 + AT_rich Low_complexity Low_complexity 1 28 0 1355 208 32 11 chr2 158201082 158201366 -95055217 - AluJo SINE Alu -22 290 1 21 0 0 0 chr2 158201811 158201832 -95054751 + AT_rich Low_complexity Low_complexity 1 21 0 2104 87 0 21 chr2 158201834 158202122 -95054461 - AluY SINE Alu -19 292 11 1472 168 40 46 chr2 158202621 158202924 -95053659 + AluJo SINE Alu 1 301 -11 180 0 0 0 chr2 158203478 158203498 -95053085 + (T)n Simple_repeat Simple_repeat 1 20 0 301 103 0 0 chr2 158203647 158203686 -95052897 - Alu SINE Alu -30 272 234 29 47 0 0 chr2 158205152 158205195 -95051388 + AT_rich Low_complexity Low_complexity 1 43 0 197 32 0 32 chr2 158205432 158205463 -95051120 + (TA)n Simple_repeat Simple_repeat 2 31 0 21 57 0 0 chr2 158206096 158206131 -95050452 + AT_rich Low_complexity Low_complexity 1 35 0 1544 170 78 0 chr2 158206435 158206706 -95049877 + AluJo SINE Alu 1 292 -20 1201 169 94 53 chr2 158206889 158207178 -95049405 - MER44D DNA MER2_type -1889 602 326 2244 95 10 0 chr2 158207178 158207472 -95049111 + AluSq SINE Alu 1 297 -16 1201 169 94 53 chr2 158207472 158207501 -95049082 - MER44D DNA MER2_type -2165 326 1 939 210 104 49 chr2 158207501 158207828 -95048755 + MLT1C LTR MaLR 76 335 -39 893 126 0 15 chr2 158208315 158208450 -95048133 + FLAM_C SINE Alu 1 133 0 2303 68 7 0 chr2 158208556 158208849 -95047734 + AluY SINE Alu 16 310 -1 415 202 87 29 chr2 158209364 158209468 -95047115 + MER2 DNA MER2_type 236 345 0 1694 189 0 24 chr2 158209645 158209942 -95046641 + AluJb SINE Alu 7 296 -16 1859 115 0 18 chr2 158210658 158210936 -95045647 - AluSx SINE Alu -13 299 27 269 148 37 19 chr2 158210937 158210991 -95045592 + MSTB2 LTR MaLR 14 68 -389 2020 140 0 9 chr2 158211151 158211466 -95045117 + AluSx SINE Alu 1 312 0 1716 251 65 58 chr2 158211667 158211875 -95044708 - L1MC/D LINE L1 -716 5388 5183 1765 121 76 7 chr2 158211875 158212165 -95044418 + AluSx SINE Alu 1 310 -2 1716 251 65 58 chr2 158212165 158212655 -95043928 - L1MC/D LINE L1 -921 5183 4707 2112 130 3 0 chr2 158212655 158212955 -95043628 - AluSq SINE Alu -12 301 1 1716 251 65 58 chr2 158212955 158213265 -95043318 - L1MC/D LINE L1 -1397 4707 4401 240 86 0 0 chr2 158213367 158213402 -95043181 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1290 183 60 12 chr2 158213426 158213678 -95042905 + AluJb SINE Alu 33 296 -16 905 247 63 105 chr2 158213693 158214483 -95042100 - L1MC/D LINE L1 -1714 4366 3610 2099 102 43 16 chr2 158214520 158214823 -95041760 - AluSx SINE Alu -1 311 1 552 311 115 28 chr2 158214823 158215137 -95041446 - L1MC/D LINE L1 -5720 350 6 198 0 0 0 chr2 158215627 158215649 -95040934 + (A)n Simple_repeat Simple_repeat 1 22 0 1924 191 104 48 chr2 158216046 158216565 -95040018 - LTR10A LTR ERV1 -61 548 1 279 310 21 102 chr2 158216567 158216754 -95039829 + MER5A DNA MER1_type 4 175 -14 2407 136 19 67 chr2 158216831 158216936 -95039647 + L1MC1 LINE L1 5879 5988 -345 2402 69 3 0 chr2 158216936 158217224 -95039359 + AluY SINE Alu 1 289 -22 2407 136 19 67 chr2 158217224 158217596 -95038987 + L1MC1 LINE L1 5988 6333 0 241 340 52 21 chr2 158217639 158217736 -95038847 - L2 LINE L2 -5 3267 3168 1172 197 72 70 chr2 158218000 158218456 -95038127 - LTR16A1 LTR ERVL 0 457 1 640 209 38 6 chr2 158218539 158218697 -95037886 - Charlie1 DNA MER1_type 0 2761 2599 350 266 141 0 chr2 158218809 158218937 -95037646 + MIR SINE MIR 104 249 -13 2608 198 36 8 chr2 158219316 158219902 -95036681 - Charlie1 DNA MER1_type -16 2745 2144 353 260 26 0 chr2 158219893 158219970 -95036613 - Charlie1 DNA MER1_type -2682 79 1 * 2759 171 45 31 chr2 158219996 158220552 -95036031 - MER74B LTR ERVL -1 621 58 11326 80 1 4 chr2 158220611 158222924 -95033659 - L1PA7 LINE L1 -3 6151 3838 15529 88 9 6 chr2 158223025 158225004 -95031579 - L1PA7 LINE L1 -2325 3821 1813 2200 112 3 0 chr2 158225004 158225298 -95031285 + AluSg SINE Alu 1 295 -15 15529 88 9 6 chr2 158225298 158225720 -95030863 - L1PA7 LINE L1 -4333 1813 1394 182 266 16 16 chr2 158225790 158225854 -95030729 + L2 LINE L2 2992 3055 -217 1555 167 0 50 chr2 158226481 158226780 -95029803 + AluJb SINE Alu 14 297 -15 1677 179 21 0 chr2 158227187 158227477 -95029106 - AluSx SINE Alu -2 310 15 865 148 7 7 chr2 158227995 158228130 -95028453 + AluJo SINE Alu 1 135 -177 2233 105 3 3 chr2 158228179 158228473 -95028110 + AluSg SINE Alu 1 294 -16 643 174 122 0 chr2 158229254 158229369 -95027214 - FLAM_A SINE Alu -13 129 1 947 189 22 16 chr2 158229422 158229607 -95026976 - AluJb SINE Alu -7 305 120 212 316 45 45 chr2 158230028 158230161 -95026422 + L2 LINE L2 3176 3308 -5 1652 213 17 14 chr2 158230398 158230746 -95025837 - MLT1A1 LTR MaLR 0 365 17 732 165 42 127 chr2 158231160 158231324 -95025259 - MER3 DNA MER1_type -8 201 57 2267 104 3 3 chr2 158231324 158231633 -95024950 + AluSc SINE Alu 1 309 0 732 165 42 127 chr2 158231633 158231680 -95024903 - MER3 DNA MER1_type -152 57 8 1631 183 17 7 chr2 158231766 158232067 -95024516 + AluJo SINE Alu 1 304 -8 41 21 0 0 chr2 158232068 158232116 -95024467 + AT_rich Low_complexity Low_complexity 1 48 0 198 0 0 0 chr2 158232137 158232159 -95024424 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 2509 77 6 3 chr2 158232177 158232488 -95024095 + AluSq SINE Alu 1 312 -1 354 376 60 20 chr2 158232739 158232888 -95023695 - MER91A DNA MER1_type 0 196 42 36 0 0 0 chr2 158233003 158233039 -95023544 + AT_rich Low_complexity Low_complexity 1 36 0 2071 144 3 0 chr2 158233132 158233437 -95023146 + AluSx SINE Alu 1 306 -6 1143 149 0 11 chr2 158233445 158233620 -95022963 + AluJb SINE Alu 127 299 -13 573 133 62 18 chr2 158233644 158233757 -95022826 + L1MCa LINE L1 20 137 -6289 1420 213 133 54 chr2 158233757 158234259 -95022324 + LTR10B LTR ERV1 1 542 -5 4266 183 117 58 chr2 158234266 158234837 -95021746 + L1MCb LINE L1 80 616 -5948 1705 179 0 20 chr2 158234837 158235133 -95021450 - AluJb SINE Alu -22 290 1 4266 183 117 58 chr2 158235133 158236409 -95020174 + L1MCb LINE L1 616 2059 -4505 1272 173 9 18 chr2 158236409 158236635 -95019948 + AluJo SINE Alu 86 309 -3 21 0 0 0 chr2 158236637 158236658 -95019925 + AT_rich Low_complexity Low_complexity 1 21 0 1030 187 10 10 chr2 158236671 158236880 -95019703 - AluJb SINE Alu -1 311 103 1968 137 0 3 chr2 158237175 158237460 -95019123 + AluSx SINE Alu 1 284 -28 234 0 0 0 chr2 158237476 158237502 -95019081 + (TAA)n Simple_repeat Simple_repeat 2 27 0 776 165 0 0 chr2 158237562 158237677 -95018906 - FRAM SINE Alu -14 162 48 3913 96 4 8 chr2 158237677 158238190 -95018393 + MER9 LTR ERVK 1 511 0 4559 82 5 8 chr2 158238190 158238788 -95017795 + HERVK9 LTR ERVK 1 596 -5320 342 132 0 0 chr2 158238786 158238839 -95017744 + HERVK9 LTR ERVK 1270 1322 -4594 * 10909 51 4 2 chr2 158238848 158240152 -95016431 + HERVK9 LTR ERVK 1481 2786 -3130 1841 61 9 0 chr2 158240152 158240381 -95016202 + HERVK9 LTR ERVK 3711 3941 -1975 * 3761 108 7 21 chr2 158240380 158240956 -95015627 + HERVK9 LTR ERVK 4582 5149 -767 3443 103 2 2 chr2 158240956 158241423 -95015160 - MER9 LTR ERVK -3 508 42 891 83 0 0 chr2 158241431 158241540 -95015043 + AluY SINE Alu 181 289 -22 2120 129 0 0 chr2 158241732 158242034 -95014549 - AluSx SINE Alu -10 302 1 385 220 184 18 chr2 158242361 158242470 -95014113 - L2 LINE L2 -5 3308 3182 227 277 15 0 chr2 158242534 158242599 -95013984 + Charlie8 DNA MER1_type 2349 2414 -3 4360 178 92 14 chr2 158292868 158293007 -94963576 + MER45B DNA AcHobo 59 186 -1395 2016 118 52 0 chr2 158293007 158293296 -94963287 - AluSx SINE Alu -8 304 1 4360 178 92 14 chr2 158293296 158294067 -94962516 + MER45B DNA AcHobo 186 1040 0 1876 154 0 7 chr2 158294119 158294411 -94962172 - AluSx SINE Alu -22 290 1 182 195 24 0 chr2 158294726 158294767 -94961816 + L2 LINE L2 3268 3309 -4 910 154 8 0 chr2 158294777 158294907 -94961676 + FLAM_C SINE Alu 1 131 -2 2235 121 0 0 chr2 158296695 158297001 -94959582 - AluSx SINE Alu -6 306 1 613 165 10 0 chr2 158297041 158297138 -94959445 + AluJ/FLAM SINE Alu 2 99 -213 2205 67 46 0 chr2 158297402 158297687 -94958896 + AluY SINE Alu 1 298 -13 356 214 20 20 chr2 158298257 158298355 -94958228 + L1MC5 LINE L1 7102 7199 -762 272 247 13 0 chr2 158298360 158298437 -94958146 + L1MC5 LINE L1 7293 7370 -591 914 172 12 18 chr2 158298851 158299014 -94957569 + FRAM SINE Alu 1 157 -19 3440 204 94 22 chr2 158299332 158299834 -94956749 - L1M4 LINE L1 -920 5226 4761 2180 112 3 0 chr2 158299834 158300137 -94956446 - AluY SINE Alu -7 304 1 3440 204 94 22 chr2 158300137 158300610 -94955973 - L1M4 LINE L1 -1385 4761 4181 2174 98 0 43 chr2 158300623 158300949 -94955634 - AluSq SINE Alu 0 313 2 2298 105 13 3 chr2 158300962 158301267 -94955316 - AluSx SINE Alu -4 308 1 440 176 0 0 chr2 158301267 158301341 -94955242 - AluSq/x SINE Alu -179 133 60 1095 113 0 0 chr2 158301341 158301482 -94955101 - AluSq/x SINE Alu -171 141 1 789 169 15 8 chr2 158301482 158301612 -94954971 - AluSq/x SINE Alu -180 133 3 553 273 8 0 chr2 158301616 158301748 -94954835 - L1M4 LINE L1 -1967 4179 4047 1504 199 58 53 chr2 158301748 158301780 -94954803 - MLT2D LTR ERVL 0 414 384 420 20 0 0 chr2 158301780 158301829 -94954754 + (CA)n Simple_repeat Simple_repeat 2 50 0 1951 113 21 3 chr2 158301837 158302119 -94954464 - AluSx SINE Alu -13 299 13 1504 199 58 53 chr2 158302119 158302140 -94954443 - MLT2D LTR ERVL -36 378 359 2391 135 55 36 chr2 158302140 158302561 -94954022 + Tigger2a DNA MER2_type 5 433 -1 1504 199 58 53 chr2 158302561 158302618 -94953965 - MLT2D LTR ERVL -55 359 304 2228 117 0 0 chr2 158302618 158302918 -94953665 + AluSx SINE Alu 1 300 -12 1504 199 58 53 chr2 158302918 158303208 -94953375 - MLT2D LTR ERVL -110 304 1 502 218 18 0 chr2 158303211 158303321 -94953262 - L1M4 LINE L1 -2098 4048 3937 363 288 200 8 chr2 158303611 158303736 -94952847 + MER5A DNA MER1_type 41 189 0 539 309 30 30 chr2 158303765 158303995 -94952588 - L3b LINE CR1 -229 1354 1125 24 53 0 0 chr2 158304124 158304162 -94952421 + AT_rich Low_complexity Low_complexity 1 38 0 230 224 0 13 chr2 158304304 158304380 -94952203 + GA-rich Low_complexity Low_complexity 4 78 0 1631 190 63 33 chr2 158305788 158306151 -94950432 - MLT1A2 LTR MaLR 0 374 1 1373 227 127 85 chr2 158306446 158306966 -94949617 - MLT1F LTR MaLR 0 542 1 2234 126 96 30 chr2 158307017 158307071 -94949512 + MSTC LTR MaLR 1 50 -378 2418 94 0 3 chr2 158307071 158307379 -94949204 + AluSc SINE Alu 2 308 -1 2234 126 96 30 chr2 158307379 158307690 -94948893 + MSTC LTR MaLR 50 390 -38 964 204 46 5 chr2 158307934 158308130 -94948453 - MER3 DNA MER1_type -5 204 1 1830 149 71 0 chr2 158308325 158308607 -94947976 + AluJb SINE Alu 1 302 -10 234 0 0 0 chr2 158309462 158309488 -94947095 + (A)n Simple_repeat Simple_repeat 1 26 0 386 259 0 12 chr2 158310643 158310724 -94945859 + L2 LINE L2 3192 3271 -1 246 327 58 0 chr2 158311006 158311110 -94945473 + L2 LINE L2 2890 2999 -273 2149 112 3 3 chr2 158312083 158312415 -94944168 - AluSx SINE Alu 0 312 3 2215 137 18 32 chr2 158312487 158312829 -94943754 + MER1B DNA MER1_type 1 337 0 1479 173 150 0 chr2 158313040 158313300 -94943283 + AluJb SINE Alu 1 299 -3 213 39 0 0 chr2 158313969 158313995 -94942588 + (TG)n Simple_repeat Simple_repeat 1 26 0 360 59 0 0 chr2 158313995 158314046 -94942537 + (GA)n Simple_repeat Simple_repeat 2 52 0 370 283 54 63 chr2 158314096 158314301 -94942282 + MIR3 SINE MIR 5 207 -1 697 259 78 38 chr2 158314969 158315262 -94941321 + MLT1H LTR MaLR 206 510 -39 2151 100 23 19 chr2 158315310 158315488 -94941095 - AluSg SINE Alu 0 310 129 2275 115 0 3 chr2 158315488 158315793 -94940790 - AluSx SINE Alu -8 304 1 2151 100 23 19 chr2 158315793 158315923 -94940660 - AluSg SINE Alu -181 129 1 417 200 16 112 chr2 158316127 158316252 -94940331 + L2 LINE L2 3199 3311 -2 2217 121 0 0 chr2 158316788 158317086 -94939497 + AluSx SINE Alu 1 298 -14 294 170 0 0 chr2 158317480 158317527 -94939056 + MSTC LTR MaLR 374 420 -8 362 295 129 14 chr2 158318504 158318643 -94937940 + MIR3 SINE MIR 39 193 -15 1205 195 71 56 chr2 158318948 158319286 -94937297 + MER2 DNA MER2_type 2 344 0 234 0 0 0 chr2 158321339 158321365 -94935218 + (TC)n Simple_repeat Simple_repeat 2 27 0 198 0 0 0 chr2 158321364 158321386 -94935197 + (TA)n Simple_repeat Simple_repeat 1 22 0 * 1937 125 11 7 chr2 158321396 158321683 -94934900 - AluSx SINE Alu -24 288 1 793 154 0 7 chr2 158321704 158321840 -94934743 - L1M4 LINE L1 -383 5795 5661 1613 157 7 7 chr2 158322513 158322794 -94933789 - AluJb SINE Alu -31 281 1 528 291 122 16 chr2 158322952 158323199 -94933384 + L1ME3A LINE L1 5889 6161 -9 256 96 19 19 chr2 158323217 158323223 -94933360 + (GAAAA)n Simple_repeat Simple_repeat 2 7 -46 1929 158 9 25 chr2 158323223 158323540 -94933043 + AluJb SINE Alu 1 312 0 256 96 19 19 chr2 158323540 158323585 -94932998 + (GAAAA)n Simple_repeat Simple_repeat 6 53 0 398 125 0 0 chr2 158323620 158323689 -94932894 + L1PA14 LINE L1 10 385 -6076 5781 144 12 5 chr2 158324232 158325210 -94931373 + L1PA14 LINE L1 5491 6475 -1 2334 98 7 0 chr2 158325227 158325522 -94931061 + AluSq SINE Alu 1 297 -16 2259 91 0 7 chr2 158325755 158326051 -94930532 - AluSx SINE Alu -18 294 1 353 83 0 0 chr2 158326147 158326195 -94930388 + ALR/Alpha Satellite centromeric 3 50 -122 193 261 0 22 chr2 158326245 158326291 -94930292 - L2 LINE L2 -5 3267 3223 849 185 28 66 chr2 158326644 158326691 -94929892 + MER3 DNA MER1_type 2 49 -160 2477 80 7 0 chr2 158326691 158326991 -94929592 + AluSg SINE Alu 1 302 -8 849 185 28 66 chr2 158326991 158327154 -94929429 + MER3 DNA MER1_type 49 204 -5 212 342 103 17 chr2 158327329 158327446 -94929137 - L2 LINE L2 0 3272 3146 23 0 0 0 chr2 158327457 158327480 -94929103 + AT_rich Low_complexity Low_complexity 1 23 0 349 185 109 0 chr2 158327911 158328003 -94928580 - MER103 DNA DNA -52 114 13 313 214 39 0 chr2 158328113 158328216 -94928367 + L1M4 LINE L1 3815 3921 -2225 872 199 136 42 chr2 158328219 158328291 -94928292 + L1M4 LINE L1 4288 4352 -1794 2438 89 0 0 chr2 158328291 158328594 -94927989 + AluY SINE Alu 1 303 -8 872 199 136 42 chr2 158328594 158328852 -94927731 + L1M4 LINE L1 4352 4649 -1497 1134 184 8 37 chr2 158328860 158329104 -94927479 + AluJo SINE Alu 1 237 -75 1228 220 15 30 chr2 158329193 158329597 -94926986 + L1M4c LINE L1 2101 2498 -3886 247 32 0 0 chr2 158329601 158329653 -94926930 + AluY SINE Alu 253 304 0 3463 200 52 57 chr2 158329654 158330347 -94926236 + L1M4c LINE L1 2687 3373 -3009 2337 97 3 0 chr2 158330347 158330645 -94925938 - AluSx SINE Alu -13 299 1 3463 200 52 57 chr2 158330645 158331074 -94925509 + L1M4c LINE L1 3373 3803 -2579 2065 123 32 0 chr2 158331537 158331822 -94924761 - AluSq SINE Alu -19 294 1 5546 197 35 24 chr2 158332494 158334954 -94921629 - L1MC1 LINE L1 -5 6328 3840 318 210 34 13 chr2 158335254 158335360 -94921223 + MLT1L LTR MaLR 404 595 -1 414 294 19 66 chr2 158335658 158335869 -94920714 + MIR SINE MIR 8 208 -54 2125 125 3 0 chr2 158336047 158336342 -94920241 + AluSx SINE Alu 1 296 -16 180 286 0 0 chr2 158336934 158336983 -94919600 - L2 LINE L2 0 3272 3224 264 326 61 61 chr2 158337042 158337118 -94919465 + MER5A DNA MER1_type 7 82 -107 2285 109 0 0 chr2 158337118 158337412 -94919171 + AluSx SINE Alu 1 294 -18 264 326 61 61 chr2 158337412 158337516 -94919067 + MER5A DNA MER1_type 81 187 -2 251 111 0 22 chr2 158337576 158337621 -94918962 + (TG)n Simple_repeat Simple_repeat 1 44 0 4042 137 9 2 chr2 158338003 158338633 -94917950 + MER41B LTR ERV1 1 635 0 325 235 46 92 chr2 158339518 158339556 -94917027 + MIR SINE MIR 117 155 -107 2007 4 53 0 chr2 158339556 158339782 -94916801 + AluY SINE Alu 74 311 0 325 235 46 92 chr2 158339782 158339896 -94916687 + MIR SINE MIR 155 262 0 1503 202 7 17 chr2 158339990 158340302 -94916281 + AluJo SINE Alu 1 309 0 787 159 0 60 chr2 158340350 158340501 -94916082 - AluJo SINE Alu -135 177 36 1094 195 103 55 chr2 158342208 158342556 -94914027 - MLT1A1 LTR MaLR 0 365 1 360 239 83 56 chr2 158342625 158342805 -94913778 + LTR33 LTR ERVL 99 283 -238 355 323 160 18 chr2 158343271 158343553 -94913030 - L1MC/D LINE L1 -2225 5583 5262 1323 187 144 3 chr2 158343554 158343853 -94912730 - MER58B DNA MER1_type 0 341 1 249 262 0 16 chr2 158347404 158347465 -94909118 + CT-rich Low_complexity Low_complexity 5 64 0 2161 114 7 10 chr2 158347643 158347949 -94908634 + AluSx SINE Alu 1 305 -7 338 308 132 13 chr2 158348105 158348264 -94908319 + MIR SINE MIR 79 256 -6 439 293 92 12 chr2 158348416 158348580 -94908003 - MIR SINE MIR -21 241 65 194 261 0 91 chr2 158348673 158348761 -94907822 - L2 LINE L2 -189 3083 3004 1391 102 11 0 chr2 158348868 158349054 -94907529 + AluY SINE Alu 108 295 -16 343 140 0 0 chr2 158349056 158349106 -94907477 - AluJ/FLAM SINE Alu -239 63 14 201 154 0 0 chr2 158349167 158349206 -94907377 + (TA)n Simple_repeat Simple_repeat 1 39 0 2362 112 0 0 chr2 158349288 158349592 -94906991 + AluSx SINE Alu 1 304 -8 441 280 33 25 chr2 158350459 158350633 -94905950 + MER5A DNA MER1_type 1 187 -2 2056 116 14 17 chr2 158350856 158351149 -94905434 + AluSx SINE Alu 1 292 -20 418 285 52 72 chr2 158351237 158351311 -94905272 - MIR SINE MIR -25 237 163 2260 114 0 0 chr2 158351311 158351618 -94904965 + AluSx SINE Alu 1 307 -5 418 285 52 72 chr2 158351618 158351736 -94904847 - MIR SINE MIR -99 163 49 478 118 0 0 chr2 158351928 158351996 -94904587 + AluJ/FRAM SINE Alu 215 282 -30 1996 146 3 3 chr2 158352563 158352864 -94903719 + AluJb SINE Alu 1 301 -11 2148 112 0 40 chr2 158352866 158353189 -94903394 + AluSg SINE Alu 1 310 0 2013 109 17 24 chr2 158354008 158354302 -94902281 + AluSx SINE Alu 17 308 -4 507 287 107 32 chr2 158354346 158354562 -94902021 + L1MEd LINE L1 932 1163 -4956 17850 149 22 27 chr2 158354567 158354729 -94901854 - L1MA2 LINE L1 0 7723 7562 2166 118 3 0 chr2 158354729 158355033 -94901550 - AluSx SINE Alu -7 305 1 17850 149 22 27 chr2 158355033 158356959 -94899624 - L1MA2 LINE L1 -161 7562 5628 1590 148 16 76 chr2 158356959 158357276 -94899307 - AluSx SINE Alu -14 298 1 2192 113 38 0 chr2 158357276 158357569 -94899014 - AluSx SINE Alu -8 304 1 17850 149 22 27 chr2 158357569 158359637 -94896946 - L1MA2 LINE L1 -2094 5629 3552 278 48 0 0 chr2 158359637 158359679 -94896904 - AluSx SINE Alu -2 298 257 1686 117 0 0 chr2 158359679 158359901 -94896682 - AluSx SINE Alu -90 222 1 17850 149 22 27 chr2 158359901 158361158 -94895425 - L1MA2 LINE L1 -4170 3553 2291 1943 102 102 0 chr2 158361158 158361441 -94895142 + AluSx SINE Alu 1 312 0 17850 149 22 27 chr2 158361441 158361456 -94895127 - L1MA2 LINE L1 -5432 2291 2277 1988 154 0 0 chr2 158361456 158361755 -94894828 + AluSx SINE Alu 7 305 -7 17850 149 22 27 chr2 158361755 158363605 -94892978 - L1MA2 LINE L1 -5446 2277 430 557 185 0 0 chr2 158363605 158363697 -94892886 - Tigger5 DNA MER2_type -2231 92 1 340 289 54 7 chr2 158363714 158363863 -94892720 + HAL1 LINE L1 1487 1642 -865 201 74 0 0 chr2 158364026 158364053 -94892530 + (CTA)n Simple_repeat Simple_repeat 1 27 0 1201 247 47 39 chr2 158364218 158364520 -94892063 - L1ME1 LINE L1 -6 6160 5851 1660 201 3 13 chr2 158364520 158364823 -94891760 - AluJb SINE Alu -12 300 1 1201 247 47 39 chr2 158364823 158365010 -94891573 - L1ME1 LINE L1 -315 5851 5667 835 207 188 9 chr2 158365012 158365246 -94891337 + MSTD LTR MaLR 56 364 -64 673 252 6 13 chr2 158365254 158365413 -94891170 - FRAM SINE Alu -18 158 1 651 228 105 0 chr2 158365413 158365606 -94890977 - L1ME1 LINE L1 -728 5438 5229 5636 175 17 63 chr2 158365707 158365905 -94890678 + L1MB1 LINE L1 3924 4130 -2038 2072 155 0 0 chr2 158365905 158366209 -94890374 - AluJb SINE Alu 0 312 9 5636 175 17 63 chr2 158366209 158366245 -94890338 + L1MB1 LINE L1 4130 4166 -2002 2232 135 3 0 chr2 158366245 158366556 -94890027 - AluSx SINE Alu 0 312 1 5636 175 17 63 chr2 158366556 158367962 -94888621 + L1MB1 LINE L1 4166 5494 -674 632 124 21 0 chr2 158367984 158368081 -94888502 + FLAM_C SINE Alu 19 117 -26 216 97 0 0 chr2 158368084 158368115 -94888468 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 2990 154 28 78 chr2 158368121 158368442 -94888141 + L1MB1 LINE L1 5493 5828 -340 1951 167 0 3 chr2 158368442 158368742 -94887841 + AluJb SINE Alu 1 299 -13 2990 154 28 78 chr2 158368742 158369129 -94887454 + L1MB1 LINE L1 5828 6166 -2 2239 222 41 37 chr2 158369178 158369814 -94886769 + L1ME LINE L1 4655 5296 -870 1802 156 21 0 chr2 158369814 158370096 -94886487 - AluJb SINE Alu -24 288 1 2239 222 41 37 chr2 158370096 158370398 -94886185 + L1ME LINE L1 5296 5595 -571 915 237 54 32 chr2 158370407 158370685 -94885898 + L1MDa LINE L1 28 311 -6229 2135 208 11 17 chr2 158370685 158371146 -94885437 + MLT2B3 LTR ERVL 1 458 -96 3453 114 8 6 chr2 158371146 158371656 -94884927 - MER9 LTR ERVK 0 511 1 26935 68 19 1 chr2 158371659 158375370 -94881213 - HERVK9 LTR ERVK -4 5912 2137 8514 78 49 46 chr2 158375369 158375898 -94880685 - HERVK9 LTR ERVK -4555 1361 835 * 207 232 0 87 chr2 158375898 158375967 -94880616 - MER5B DNA MER1_type -61 117 55 8514 78 49 46 chr2 158375967 158376726 -94879857 - HERVK9 LTR ERVK -5081 835 1 3732 103 0 4 chr2 158376726 158377239 -94879344 - MER9 LTR ERVK 0 511 1 717 125 0 0 chr2 158377239 158377351 -94879232 + MLT2B3 LTR ERVL 409 520 0 3124 223 61 79 chr2 158377351 158378667 -94877916 + L1MDa LINE L1 307 1729 -4811 290 158 18 0 chr2 158378912 158378969 -94877614 - MER41A LTR ERV1 -104 450 393 799 142 0 39 chr2 158379292 158379419 -94877164 - FLAM_C SINE Alu -8 125 4 185 385 29 10 chr2 158379835 158379939 -94876644 - MIR3 SINE MIR -92 116 11 257 364 7 39 chr2 158380064 158380218 -94876365 + L2 LINE L2 2828 2976 -296 3048 200 88 3 chr2 158381062 158381803 -94874780 + MER63C DNA MER1_type 1 804 -126 731 83 19 0 chr2 158381823 158381931 -94874652 - HY1 scRNA scRNA -1 111 2 355 278 50 56 chr2 158382203 158382383 -94874200 + L2 LINE L2 3106 3284 -29 483 247 74 48 chr2 158382953 158383289 -94873294 + MER113 DNA MER1_type? 1 345 -176 832 126 0 0 chr2 158383297 158383416 -94873167 + AluJo SINE Alu 5 123 -189 341 153 0 0 chr2 158383455 158383514 -94873069 + MER113 DNA MER1_type? 365 423 -98 1841 165 3 22 chr2 158384138 158384453 -94872130 - AluJb SINE Alu -3 309 1 378 143 195 0 chr2 158384805 158384882 -94871701 + L1MC1 LINE L1 6242 6333 0 1930 188 14 6 chr2 158385179 158385541 -94871042 + MLT1A1 LTR MaLR 1 365 0 693 253 71 120 chr2 158385602 158386150 -94870433 - MLT1G LTR MaLR 0 555 30 1764 197 44 16 chr2 158386150 158386535 -94870048 + MSTD LTR MaLR 1 396 0 693 253 71 120 chr2 158386535 158386564 -94870019 - MLT1G LTR MaLR -525 30 1 533 296 74 60 chr2 158388715 158388967 -94867616 - MIR SINE MIR -14 248 11 297 287 0 0 chr2 158389898 158389992 -94866591 + T-rich Low_complexity Low_complexity 1 94 0 1907 112 66 18 chr2 158390529 158390815 -94865768 - AluSx SINE Alu -8 304 5 865 161 16 65 chr2 158391205 158391391 -94865192 + AluJo SINE Alu 124 300 -12 327 256 0 0 chr2 158391404 158391494 -94865089 + GA-rich Low_complexity Low_complexity 1 90 0 2357 93 0 0 chr2 158392212 158392512 -94864071 - AluSx SINE Alu -11 301 2 2170 190 34 0 chr2 158392954 158393370 -94863213 + MER44D DNA MER2_type 1 430 -275 1052 90 0 0 chr2 158393373 158393507 -94863076 + AluSq/x SINE Alu 1 134 -179 2203 122 0 0 chr2 158393508 158393819 -94862764 + AluSq SINE Alu 1 311 -2 2079 132 7 0 chr2 158393834 158394137 -94862446 + AluSx SINE Alu 7 311 -1 1778 144 10 0 chr2 158394138 158394430 -94862153 + MER44D DNA MER2_type 439 605 0 250 189 53 11 chr2 158394430 158394523 -94862060 - Charlie5 DNA MER1_type -66 2546 2450 754 237 124 8 chr2 158394523 158394789 -94861794 - L1MC4a LINE L1 -158 7650 7354 2598 236 82 3 chr2 158394801 158395371 -94861212 - L1MC4 LINE L1 -749 7293 6647 216 97 0 0 chr2 158395371 158395402 -94861181 + (TATG)n Simple_repeat Simple_repeat 2 32 0 2598 236 82 3 chr2 158395402 158395588 -94860995 - L1MC4 LINE L1 -1395 6647 6477 2111 121 7 0 chr2 158395590 158395879 -94860704 - AluSx SINE Alu -19 293 3 394 202 0 12 chr2 158396122 158396206 -94860377 - MLT1L LTR MaLR -532 83 1 1139 247 113 26 chr2 158396319 158396707 -94859876 + MLT1K LTR MaLR 167 588 0 231 257 20 79 chr2 158398464 158398565 -94858018 + L2 LINE L2 2563 2657 -657 395 311 127 65 chr2 158398633 158399067 -94857516 + L2 LINE L2 2811 3271 -1 1708 150 0 0 chr2 158399142 158399389 -94857194 - AluSx SINE Alu -64 248 2 1091 308 93 18 chr2 158400098 158400497 -94856086 + L2 LINE L2 901 1329 -1985 184 261 22 0 chr2 158400843 158400889 -94855694 + MIR SINE MIR 8 54 -208 187 283 19 0 chr2 158402618 158402671 -94853912 - MIR SINE MIR 0 262 209 2118 122 0 0 chr2 158403118 158403406 -94853177 - AluSx SINE Alu -24 288 1 268 135 19 0 chr2 158403539 158403591 -94852992 + MER41A LTR ERV1 400 452 -102 1449 176 87 7 chr2 158403752 158404034 -94852549 - AluJb SINE Alu 0 412 97 195 42 0 0 chr2 158404034 158404058 -94852525 + (TG)n Simple_repeat Simple_repeat 1 24 0 1449 176 87 7 chr2 158404058 158404164 -94852419 - AluJb SINE Alu -315 97 1 377 267 156 15 chr2 158404167 158404302 -94852281 + MIR SINE MIR 95 248 -14 2082 112 11 0 chr2 158404444 158404729 -94851854 - AluSx SINE Alu -24 288 1 236 206 103 0 chr2 158404842 158404910 -94851673 + L1MEd LINE L1 739 813 -5306 21 0 0 0 chr2 158404911 158404932 -94851651 + AT_rich Low_complexity Low_complexity 1 21 0 1616 154 0 0 chr2 158404946 158405180 -94851403 - AluSx SINE Alu -78 234 1 642 280 41 58 chr2 158405353 158405921 -94850662 + L1MEd LINE L1 907 1587 -4542 1716 183 3 10 chr2 158405921 158406222 -94850361 - AluJo SINE Alu -13 299 1 642 280 41 58 chr2 158406222 158406253 -94850330 + L1MEd LINE L1 1587 1617 -4512 1885 163 45 9 chr2 158407177 158407509 -94849074 + MER2 DNA MER2_type 1 344 0 1214 181 9 5 chr2 158407639 158407849 -94848734 - AluSg/x SINE Alu -17 293 83 1831 148 159 84 chr2 158407931 158407998 -94848585 - MLT2B2 LTR ERVL 0 515 454 2161 124 43 0 chr2 158407998 158408344 -94848239 - MER46B DNA MER2_type 0 236 1 1831 148 159 84 chr2 158408344 158408681 -94847902 - MLT2B2 LTR ERVL -61 454 69 1999 80 3 84 chr2 158408681 158408992 -94847591 - AluSx SINE Alu -26 286 1 1831 148 159 84 chr2 158408992 158409052 -94847531 - MLT2B2 LTR ERVL -446 69 15 1551 163 73 47 chr2 158410335 158410636 -94845947 + AluJb SINE Alu 1 309 -3 21 36 0 0 chr2 158411463 158411491 -94845092 + AT_rich Low_complexity Low_complexity 1 28 0 444 339 44 6 chr2 158411855 158412035 -94844548 + MIR3 SINE MIR 16 202 -6 267 231 62 0 chr2 158412142 158412207 -94844376 - L2 LINE L2 0 3313 3245 595 113 38 9 chr2 158412255 158412361 -94844222 - L1MB5 LINE L1 -8 6166 6058 1640 140 111 4 chr2 158412379 158412650 -94843933 - AluSg1 SINE Alu -9 300 1 959 203 0 0 chr2 158412654 158412817 -94843766 - AluSg/x SINE Alu -16 294 132 1938 179 10 6 chr2 158412825 158413235 -94843348 - L1MB5 LINE L1 -95 6079 5670 1910 158 0 13 chr2 158414254 158414577 -94842006 - AluSx SINE Alu 0 312 1 241 243 95 0 chr2 158415068 158415142 -94841441 + MER5A DNA MER1_type 13 93 -96 1938 155 10 0 chr2 158415201 158415504 -94841079 + AluJb SINE Alu 1 306 -6 248 344 56 16 chr2 158416011 158416136 -94840447 + L3b LINE CR1 1399 1528 -55 649 241 0 0 chr2 158416806 158416939 -94839644 - FLAM_A SINE Alu 0 133 1 2086 103 41 7 chr2 158417057 158417348 -94839235 + AluSq SINE Alu 1 301 -12 203 169 34 17 chr2 158417641 158417700 -94838883 + (TA)n Simple_repeat Simple_repeat 2 61 0 308 276 88 42 chr2 158418295 158418556 -94838027 - L1ME4a LINE L1 -115 6006 5734 1927 155 10 3 chr2 158418575 158418884 -94837699 - AluJb SINE Alu -1 311 1 243 302 169 85 chr2 158418980 158419293 -94837290 + L2 LINE L2 1868 2153 -1161 2526 119 8 3 chr2 158419293 158419655 -94836928 + THE1B LTR MaLR 1 364 0 243 302 169 85 chr2 158419655 158419944 -94836639 + L2 LINE L2 2153 2416 -898 2371 82 3 19 chr2 158419944 158420259 -94836324 - AluY SINE Alu 0 311 2 243 302 169 85 chr2 158420259 158420423 -94836160 + L2 LINE L2 2416 2700 -614 437 276 78 81 chr2 158420534 158420711 -94835872 - L2 LINE L2 -69 3244 3067 2599 55 0 0 chr2 158420711 158421019 -94835564 + AluY SINE Alu 1 308 -3 437 276 78 81 chr2 158421019 158421185 -94835398 - L2 LINE L2 -246 3067 2902 208 290 81 102 chr2 158421231 158421514 -94835069 + L2 LINE L2 2944 3220 -93 454 295 25 15 chr2 158421537 158421747 -94834836 - L1ME4a LINE L1 -452 5669 5458 243 0 0 0 chr2 158423751 158423778 -94832805 + (T)n Simple_repeat Simple_repeat 1 27 0 1581 150 54 0 chr2 158423778 158424018 -94832565 - AluSx SINE Alu -59 253 1 288 368 45 15 chr2 158424560 158424693 -94831890 + MER5A DNA MER1_type 2 138 -51 1873 140 7 0 chr2 158424706 158425017 -94831566 - AluJb SINE Alu 0 313 1 1525 144 24 102 chr2 158425026 158425222 -94831361 - AluYb8 SINE Alu -11 307 146 2383 88 0 7 chr2 158425222 158425530 -94831053 - AluSp SINE Alu -7 306 1 1525 144 24 102 chr2 158425530 158425666 -94830917 - AluYb8 SINE Alu -172 146 1 197 204 204 0 chr2 158425676 158425730 -94830853 - MER5A DNA MER1_type -124 65 1 21 0 0 0 chr2 158425986 158426007 -94830576 + AT_rich Low_complexity Low_complexity 1 21 0 1734 170 0 47 chr2 158426085 158426402 -94830181 + AluJo SINE Alu 1 302 -10 231 203 81 54 chr2 158426614 158426688 -94829895 - MIR SINE MIR -169 93 18 1106 178 18 96 chr2 158426969 158427218 -94829365 + L1M4 LINE L1 3737 4004 -2142 2088 158 0 0 chr2 158427218 158427521 -94829062 - AluJo SINE Alu -9 303 1 1106 178 18 96 chr2 158427521 158427572 -94829011 + L1M4 LINE L1 4004 4009 -2137 1984 144 0 7 chr2 158427572 158427878 -94828705 + AluSx SINE Alu 1 304 -8 1106 178 18 96 chr2 158427878 158427919 -94828664 + L1M4 LINE L1 4009 4052 -2094 423 273 88 48 chr2 158428569 158428796 -94827787 - MLT1H LTR MaLR -105 444 209 2125 136 0 0 chr2 158430253 158430547 -94826036 - AluSx SINE Alu -18 294 1 288 232 0 0 chr2 158430761 158430817 -94825766 - MER5B DNA MER1_type -1 177 122 1722 153 21 7 chr2 158430822 158431110 -94825473 + AluJo SINE Alu 1 292 -20 1938 98 14 11 chr2 158431300 158431577 -94825006 + AluSg SINE Alu 15 292 -18 2865 16 0 3 chr2 158433293 158433609 -94822974 - AluYb8 SINE Alu -3 315 1 250 247 210 32 chr2 158433774 158433960 -94822623 - MIR SINE MIR -43 219 1 395 269 19 104 chr2 158434356 158434665 -94821918 - L2 LINE L2 0 3313 3031 2173 117 0 0 chr2 158435237 158435527 -94821056 + AluSx SINE Alu 1 290 -22 6109 61 13 0 chr2 158435664 158436435 -94820148 - L1PA8 LINE L1 0 6172 5392 191 235 0 0 chr2 158436441 158436475 -94820108 + MER5A DNA MER1_type 152 185 -4 368 292 111 21 chr2 158436783 158436927 -94819656 - MIR SINE MIR -89 173 17 254 274 48 24 chr2 158438010 158438094 -94818489 + MIR SINE MIR 7 92 -170 1969 31 0 0 chr2 158439733 158439958 -94816625 - L1PA4 LINE L1 0 6155 5931 2258 98 0 3 chr2 158440398 158440695 -94815888 - AluSx SINE Alu -16 296 1 270 0 0 0 chr2 158441892 158441922 -94814661 + (A)n Simple_repeat Simple_repeat 1 30 0 2242 102 0 26 chr2 158442322 158442635 -94813948 + AluSx SINE Alu 1 305 -7 2175 178 24 19 chr2 158442974 158443396 -94813187 - L1MB8 LINE L1 -6 6172 5749 277 346 92 8 chr2 158443746 158443876 -94812707 - MIR3 SINE MIR -62 146 6 364 276 76 27 chr2 158444055 158444240 -94812343 + L1ME4a LINE L1 5927 6120 -1 343 231 83 58 chr2 158445403 158445559 -94811024 - MER112 DNA MER1_type -60 200 41 921 182 18 0 chr2 158445688 158445858 -94810725 + FRAM SINE Alu 1 171 -5 204 275 0 0 chr2 158445859 158445899 -94810684 + polypurine Low_complexity Low_complexity 6 45 0 637 308 38 21 chr2 158446751 158446991 -94809592 + MIR SINE MIR 5 248 -14 226 217 171 70 chr2 158447291 158447420 -94809163 + L1MC/D LINE L1 5617 5758 -2050 2000 156 31 74 chr2 158447457 158447532 -94809051 - MLT2A2 LTR ERVL 0 554 477 2034 102 53 7 chr2 158447532 158447815 -94808768 - AluSx SINE Alu -16 296 1 2000 156 31 74 chr2 158447815 158448316 -94808267 - MLT2A2 LTR ERVL -77 477 1 838 217 17 52 chr2 158448289 158448519 -94808064 + MER82 DNA MER2_type 2 223 -430 * 280 233 29 35 chr2 158448896 158449068 -94807515 + (TTATA)n Simple_repeat Simple_repeat 4 174 0 2243 194 26 34 chr2 158449082 158449551 -94807032 + MER82 DNA MER2_type 189 653 0 2053 105 51 7 chr2 158449609 158449903 -94806680 + AluSx SINE Alu 1 307 -5 1040 239 103 18 chr2 158450608 158450938 -94805645 - L1MEc LINE L1 -2292 3923 3566 800 176 0 15 chr2 158450939 158451070 -94805513 - AluJb SINE Alu -182 130 2 2302 233 30 35 chr2 158451070 158451544 -94805039 - L1MEc LINE L1 -2632 3583 3113 1444 222 24 17 chr2 158451544 158451891 -94804692 - AluJo SINE Alu 0 302 4 2302 233 30 35 chr2 158451891 158452158 -94804425 - L1MEc LINE L1 -3102 3113 2846 387 209 216 30 chr2 158452160 158452222 -94804361 - L1MEc LINE L1 -3586 2629 2580 2171 125 3 0 chr2 158452222 158452525 -94804058 - AluSx SINE Alu -8 304 1 387 209 216 30 chr2 158452525 158452596 -94803987 - L1MEc LINE L1 -3635 2580 2471 1716 248 13 13 chr2 158452601 158453049 -94803534 - L1MEc LINE L1 -5927 469 22 1880 171 0 0 chr2 158453067 158453371 -94803212 + AluJb SINE Alu 1 304 -8 2181 148 71 57 chr2 158453851 158454304 -94802279 + LTR32 LTR ERVL 7 465 -6 241 218 75 83 chr2 158454418 158454551 -94802032 + MLT1L LTR MaLR 445 576 -39 337 170 0 0 chr2 158454689 158454742 -94801841 + L2 LINE L2 3258 3310 -3 859 196 6 52 chr2 158455221 158455394 -94801189 - AluJb SINE Alu -7 305 141 1070 241 18 0 chr2 158455536 158455756 -94800827 - MER58A DNA MER1_type 0 224 1 723 154 18 0 chr2 158455900 158456010 -94800573 + FLAM_C SINE Alu 6 117 -26 388 233 85 85 chr2 158456013 158456202 -94800381 - MER50 LTR ERV1 -298 436 248 852 145 8 0 chr2 158456204 158456335 -94800248 - AluJb SINE Alu -180 132 1 22 0 0 0 chr2 158456384 158456406 -94800177 + AT_rich Low_complexity Low_complexity 1 22 0 192 152 0 0 chr2 158457228 158457261 -94799322 - L2 LINE L2 -8 3305 3273 427 272 40 69 chr2 158457361 158457534 -94799049 + MER5B DNA MER1_type 11 178 0 204 140 80 0 chr2 158458444 158458494 -94798089 + (CGGG)n Simple_repeat Simple_repeat 2 55 0 29 60 0 0 chr2 158459264 158459314 -94797269 + GC_rich Low_complexity Low_complexity 1 50 0 282 29 0 0 chr2 158459627 158459662 -94796921 + (CAAAA)n Simple_repeat Simple_repeat 3 37 0 28 0 0 0 chr2 158459737 158459765 -94796818 + GC_rich Low_complexity Low_complexity 1 28 0 297 0 0 0 chr2 158461068 158461101 -94795482 + (TG)n Simple_repeat Simple_repeat 2 34 0 297 0 0 0 chr2 158462497 158462530 -94794053 + (CA)n Simple_repeat Simple_repeat 2 34 0 1323 81 157 10 chr2 158462784 158462982 -94793601 - MER30 DNA MER1_type 0 230 4 195 185 261 0 chr2 158463465 158463530 -94793053 - MIR SINE MIR -10 252 171 1899 154 0 17 chr2 158463575 158463874 -94792709 + AluJb SINE Alu 1 294 -18 1994 124 6 16 chr2 158465197 158465511 -94791072 + AluSx SINE Alu 1 311 -1 964 218 27 32 chr2 158465689 158465909 -94790674 - MER20 DNA MER1_type 0 219 1 2464 63 16 7 chr2 158466944 158467247 -94789336 - AluY SINE Alu -5 306 1 1873 139 45 3 chr2 158468526 158468814 -94787769 - AluJb SINE Alu -12 300 1 1114 124 37 50 chr2 158469304 158469522 -94787061 + L1MA9 LINE L1 6098 6312 0 1397 149 92 0 chr2 158469558 158469807 -94786776 + Tigger3(Golem) DNA MER2_type 1 272 -2757 189 0 0 0 chr2 158469989 158470010 -94786573 + (T)n Simple_repeat Simple_repeat 1 21 0 827 173 0 15 chr2 158470170 158470303 -94786280 + FLAM_A SINE Alu 2 132 -1 435 348 62 11 chr2 158470807 158470985 -94785598 - MIR SINE MIR -55 207 21 26 74 0 0 chr2 158474182 158474236 -94782347 + AT_rich Low_complexity Low_complexity 1 54 0 1425 169 46 65 chr2 158474360 158474667 -94781916 - AluJo SINE Alu -11 301 1 2816 89 22 5 chr2 158474959 158475328 -94781255 - THE1C LTR MaLR 0 375 1 2020 196 28 22 chr2 158475855 158476218 -94780365 - MLT1A1 LTR MaLR 0 365 1 429 293 92 12 chr2 158478869 158479033 -94777550 + MIR SINE MIR 65 241 -21 325 308 132 13 chr2 158479185 158479344 -94777239 - MIR SINE MIR -6 256 79 2103 111 7 10 chr2 158479500 158479797 -94776786 - AluSx SINE Alu -7 305 10 2051 145 0 13 chr2 158480033 158480343 -94776240 + AluJb SINE Alu 1 306 -6 515 211 0 0 chr2 158481172 158481262 -94775321 - FLAM SINE Alu -12 131 42 351 140 0 0 chr2 158481362 158481419 -94775164 + Alu SINE Alu 246 302 0 247 304 52 20 chr2 158481719 158481845 -94774738 + MIR SINE MIR 81 208 -54 881 144 22 116 chr2 158482098 158482196 -94774387 + L1MA7 LINE L1 6068 6174 -117 1990 139 3 16 chr2 158482196 158482512 -94774071 - AluSx SINE Alu 0 312 1 881 144 22 116 chr2 158482512 158482670 -94773913 + L1MA7 LINE L1 6174 6288 -3 1752 155 0 65 chr2 158483102 158483424 -94773159 + AluJo SINE Alu 1 301 -11 27 73 0 0 chr2 158483512 158483567 -94773016 + AT_rich Low_complexity Low_complexity 1 55 0 273 268 0 14 chr2 158484071 158484142 -94772441 + MIR3 SINE MIR 111 180 -28 287 130 19 0 chr2 158484910 158484964 -94771619 + (TA)n Simple_repeat Simple_repeat 1 55 0 2145 102 46 0 chr2 158484964 158485249 -94771334 - AluSg SINE Alu -12 298 1 1652 143 15 84 chr2 158485823 158486158 -94770425 - AluJb SINE Alu 0 312 1 1259 90 94 25 chr2 158486432 158486633 -94769950 - AluSg/x SINE Alu -7 303 89 2204 109 3 16 chr2 158487062 158487375 -94769208 + AluSx SINE Alu 1 309 -3 2136 110 0 3 chr2 158488354 158488657 -94767926 + AluSx SINE Alu 1 302 0 2387 134 66 47 chr2 158490129 158490553 -94766030 + MSTB1 LTR MaLR 1 432 0 341 288 72 0 chr2 158491562 158491673 -94764910 - L2 LINE L2 -1 3271 3153 2088 137 0 3 chr2 158492054 158492354 -94764229 + AluSx SINE Alu 1 299 -13 6240 207 128 17 chr2 158492665 158494373 -94762210 - L1MC4a LINE L1 -2 7806 5910 1646 199 91 26 chr2 158494373 158494915 -94761668 - MLT1E1 LTR MaLR -8 646 12 1998 95 8 8 chr2 158497252 158497515 -94759068 + AluSq SINE Alu 1 263 -50 386 272 62 91 chr2 158497530 158497773 -94758810 - MER102b DNA MER1_type 0 341 106 2177 118 0 19 chr2 158499089 158499403 -94757180 + AluSx SINE Alu 1 308 -4 2676 147 16 68 chr2 158499762 158500274 -94756309 - MER31A LTR ERV1 0 485 1 2006 143 0 3 chr2 158500592 158500893 -94755690 + AluSx SINE Alu 1 300 -12 371 103 221 0 chr2 158500944 158501012 -94755571 - AluY SINE Alu 0 301 219 707 173 74 89 chr2 158501238 158501324 -94755259 + MER3 DNA MER1_type 4 90 -119 1294 200 126 7 chr2 158501324 158501594 -94754989 - AluJb SINE Alu -10 302 1 707 173 74 89 chr2 158501594 158501709 -94754874 + MER3 DNA MER1_type 90 202 -7 648 232 48 18 chr2 158501790 158501958 -94754625 - MER5B DNA MER1_type 0 178 6 217 364 0 0 chr2 158502176 158502253 -94754330 - MIR SINE MIR -95 113 37 611 264 98 0 chr2 158502723 158502897 -94753686 - MIR SINE MIR -59 203 13 1987 128 0 37 chr2 158503919 158504216 -94752367 + AluSx SINE Alu 1 286 -26 293 298 11 24 chr2 158504994 158505106 -94751477 - MER5A DNA MER1_type -20 158 60 274 239 9 92 chr2 158505008 158505117 -94751466 + MER5A DNA MER1_type 44 143 -46 * 516 182 11 0 chr2 158506131 158506219 -94750364 + MER94 DNA DNA 2 90 -44 1943 133 70 13 chr2 158506546 158506861 -94749722 + MER2 DNA MER2_type 3 335 -10 2261 223 75 9 chr2 158506931 158507477 -94749106 - MER119 DNA MER1_type -1 582 1 342 239 23 181 chr2 158507661 158507926 -94748657 - MIR SINE MIR -3 259 38 335 306 97 8 chr2 158508054 158508178 -94748405 - MIR SINE MIR -110 152 18 295 167 22 44 chr2 158508627 158508717 -94747866 + Charlie5 DNA MER1_type 37 124 -2488 1479 178 32 9 chr2 158508717 158509032 -94747551 + Charlie5 DNA MER1_type 2236 2557 -55 330 155 71 24 chr2 158509055 158509139 -94747444 + Charlie5 DNA MER1_type 2498 2585 -27 3501 113 62 39 chr2 158509199 158509714 -94746869 - MER1A DNA MER1_type 0 527 1 567 136 0 0 chr2 158510455 158510543 -94746040 - L1MB8 LINE L1 -9 6169 6082 194 368 48 16 chr2 158511528 158511653 -94744930 + MER5A DNA MER1_type 26 154 -35 2697 163 32 32 chr2 158512127 158512630 -94743953 + MLT1D LTR MaLR 3 505 0 428 102 17 0 chr2 158513338 158513397 -94743186 - Alu SINE Alu -257 61 2 432 212 12 0 chr2 158513398 158513483 -94743100 - L1MB7 LINE L1 -69 6115 6030 1093 101 13 0 chr2 158513612 158513771 -94742812 - L1MA2 LINE L1 0 6304 6144 715 260 10 46 chr2 158513790 158513986 -94742597 - MIR SINE MIR -21 241 53 2306 105 0 0 chr2 158514965 158515259 -94741324 - AluSg SINE Alu -16 294 1 280 354 0 18 chr2 158515611 158515724 -94740859 - MIR3 SINE MIR -24 184 74 384 266 11 11 chr2 158517158 158517252 -94739331 - MER5B DNA MER1_type -77 101 8 2156 124 7 0 chr2 158517835 158518134 -94738449 + AluSx SINE Alu 1 301 -11 268 294 36 4 chr2 158518322 158518422 -94738161 - L1MB7 LINE L1 -557 5564 5476 186 354 42 42 chr2 158518448 158518592 -94737991 - L2 LINE L2 -4 3309 3166 1960 59 26 52 chr2 158519194 158519465 -94737118 + L1PA11 LINE L1 5909 6172 -2 210 71 0 0 chr2 158519478 158519506 -94737077 + (A)n Simple_repeat Simple_repeat 1 28 0 213 261 34 57 chr2 158520080 158520168 -94736415 + MIR3 SINE MIR 111 196 -12 828 47 0 38 chr2 158520216 158520322 -94736261 + L1PA10 LINE L1 6057 6158 -10 2042 115 3 3 chr2 158520853 158521140 -94735443 + AluSx SINE Alu 1 287 -25 226 269 65 11 chr2 158521477 158521570 -94735013 + MIR SINE MIR 119 216 -46 1858 152 7 3 chr2 158521959 158522248 -94734335 + AluJo SINE Alu 14 303 -9 229 243 44 76 chr2 158523216 158523378 -94733205 + MIR SINE MIR 25 254 -8 482 158 13 0 chr2 158525463 158525539 -94731044 + AluS SINE Alu 2 78 -234 1680 190 0 3 chr2 158525821 158526121 -94730462 + AluJo SINE Alu 1 299 -13 236 359 155 0 chr2 158526188 158526291 -94730292 + L2 LINE L2 3134 3252 -20 2042 136 0 13 chr2 158527545 158527846 -94728737 - AluSx SINE Alu -15 297 1 198 0 0 0 chr2 158528606 158528628 -94727955 + (CCCCCA)n Simple_repeat Simple_repeat 2 23 0 1974 133 0 0 chr2 158528636 158528915 -94727668 - AluSg SINE Alu -31 279 1 621 271 93 36 chr2 158530118 158530343 -94726240 + MIR SINE MIR 8 245 -17 2222 104 0 3 chr2 158530389 158530688 -94725895 + AluSg SINE Alu 1 298 -12 700 243 6 17 chr2 158534452 158534629 -94721954 - MER5B DNA MER1_type -1 177 3 627 286 58 24 chr2 158535570 158535776 -94720807 + MIR SINE MIR 29 241 -21 826 231 24 0 chr2 158537366 158537535 -94719048 + AluJo SINE Alu 1 173 -139 1483 141 52 12 chr2 158537538 158537787 -94718796 + AluJo SINE Alu 42 300 -12 21 82 0 0 chr2 158538030 158538079 -94718504 + AT_rich Low_complexity Low_complexity 1 49 0 1364 169 94 8 chr2 158538083 158538218 -94718365 + AluJb SINE Alu 1 123 -189 1791 63 0 0 chr2 158538218 158538425 -94718158 + AluSc SINE Alu 1 207 -102 1364 169 94 8 chr2 158538425 158538544 -94718039 + AluJb SINE Alu 123 277 -35 195 282 0 90 chr2 158540038 158540116 -94716467 - L2 LINE L2 -8 3305 3235 2110 116 30 3 chr2 158540785 158541087 -94715496 - AluSx SINE Alu -2 310 1 288 310 0 0 chr2 158541589 158541676 -94714907 + (TA)n Simple_repeat Simple_repeat 1 87 0 1793 140 33 0 chr2 158541803 158542074 -94714509 + AluJb SINE Alu 1 280 -32 423 0 0 0 chr2 158543577 158543624 -94712959 + (TG)n Simple_repeat Simple_repeat 2 48 0 1395 133 0 10 chr2 158544451 158544647 -94711936 + AluSg/x SINE Alu 83 276 -36 832 173 20 13 chr2 158545178 158545328 -94711255 + FRAM SINE Alu 1 151 -15 537 237 70 32 chr2 158545637 158545793 -94710790 - MIR SINE MIR -43 219 58 583 245 104 25 chr2 158545849 158546090 -94710493 - MER46C DNA MER2_type 0 338 79 395 302 93 0 chr2 158546582 158546711 -94709872 - MER5B DNA MER1_type -37 141 1 287 286 7 13 chr2 158548178 158548335 -94708248 - MIR SINE MIR 0 262 26 218 297 81 14 chr2 158548704 158548778 -94707805 - MIR SINE MIR -79 183 105 1042 208 79 8 chr2 158549788 158550144 -94706439 - Charlie5 DNA MER1_type 0 2624 2244 483 236 8 0 chr2 158550146 158550269 -94706314 - Charlie5 DNA MER1_type -2488 124 1 649 263 111 23 chr2 158550512 158550729 -94705854 + MIR SINE MIR 13 248 -14 549 196 0 0 chr2 158553395 158553492 -94703091 + FLAM_C SINE Alu 35 131 -12 1467 184 85 3 chr2 158554321 158554604 -94701979 - AluJb SINE Alu -6 306 1 1485 171 61 52 chr2 158555061 158555423 -94701160 - MLT1A1 LTR MaLR 0 365 1 21 0 0 0 chr2 158556692 158556713 -94699870 + AT_rich Low_complexity Low_complexity 1 21 0 324 0 0 0 chr2 158557241 158557277 -94699306 + (TG)n Simple_repeat Simple_repeat 1 36 0 199 345 103 7 chr2 158557687 158557832 -94698751 + MIR SINE MIR 85 243 -19 711 188 8 0 chr2 158558282 158558415 -94698168 - AluJo SINE Alu -178 134 1 189 365 12 0 chr2 158559252 158559337 -94697246 - MIR3 SINE MIR -3 205 120 959 138 7 14 chr2 158559559 158559704 -94696879 + FRAM SINE Alu 8 151 -25 2216 96 10 0 chr2 158559716 158560007 -94696576 + AluSp SINE Alu 1 294 -19 2189 116 10 3 chr2 158560400 158560711 -94695872 - AluSq SINE Alu 0 313 1 280 281 23 70 chr2 158560873 158561001 -94695582 - L2 LINE L2 -534 2780 2659 * 337 298 29 58 chr2 158560949 158561120 -94695463 + MER5A DNA MER1_type 8 173 -16 2091 125 3 7 chr2 158561723 158562028 -94694555 + AluSx SINE Alu 1 304 -8 204 309 0 0 chr2 158562147 158562202 -94694381 - L2 LINE L2 -30 3242 3188 568 181 83 7 chr2 158563585 158563729 -94692854 + MER3 DNA MER1_type 31 185 -24 981 156 38 32 chr2 158563746 158563932 -94692651 - MER5A DNA MER1_type 0 189 3 456 201 138 32 chr2 158564509 158564698 -94691885 + L1MC5 LINE L1 7722 7930 -31 1596 206 0 17 chr2 158565264 158565565 -94691018 - AluJo SINE Alu -16 296 1 21 36 0 0 chr2 158566393 158566421 -94690162 + AT_rich Low_complexity Low_complexity 1 28 0 1942 151 13 22 chr2 158566839 158567150 -94689433 - AluJo SINE Alu -4 308 1 724 259 21 0 chr2 158568126 158568319 -94688264 - L1M3 LINE L1 -493 5687 5491 759 183 56 11 chr2 158568343 158568523 -94688060 - MLT1D LTR MaLR -317 188 1 481 205 0 0 chr2 158570229 158570312 -94686271 - Tigger3(Golem) DNA MER2_type -1 3028 2946 1135 122 58 47 chr2 158570330 158570581 -94686002 - L1MA9 LINE L1 -90 6201 5968 265 323 48 16 chr2 158570586 158570710 -94685873 + MIR3 SINE MIR 75 202 -6 195 260 73 73 chr2 158571577 158571635 -94684948 - MIR SINE MIR 0 262 205 1695 166 9 40 chr2 158571635 158571984 -94684599 - MER44D DNA MER2_type -1 608 1 195 260 73 73 chr2 158571984 158572048 -94684535 - MIR SINE MIR -56 206 140 327 359 51 0 chr2 158572085 158572202 -94684381 - MIR SINE MIR -112 150 28 544 302 68 5 chr2 158572740 158572932 -94683651 + MIR SINE MIR 47 250 -12 276 297 78 0 chr2 158573050 158573114 -94683469 - MIR SINE MIR -166 96 28 927 140 27 21 chr2 158573234 158573420 -94683163 + L1MB2 LINE L1 5984 6170 -1 260 312 119 81 chr2 158574445 158574740 -94681843 - L2 LINE L2 -1 3271 2966 885 352 93 25 chr2 158575555 158576503 -94680080 + L2 LINE L2 2254 3270 -2 549 319 39 10 chr2 158576708 158576915 -94679668 + MIR SINE MIR 31 243 -19 31 0 0 24 chr2 158577392 158577414 -94679169 + AT_rich Low_complexity Low_complexity 1 23 -18 2288 100 0 3 chr2 158577414 158577713 -94678870 + AluSq SINE Alu 1 298 -15 31 0 0 24 chr2 158577713 158577732 -94678851 + AT_rich Low_complexity Low_complexity 23 41 0 311 261 89 25 chr2 158579257 158579414 -94677169 + L1MC5 LINE L1 7507 7673 -288 197 256 0 0 chr2 158579415 158579454 -94677129 + MIR SINE MIR 202 240 -22 2142 121 72 26 chr2 158579573 158579919 -94676664 + THE1B LTR MaLR 1 362 -2 228 174 0 22 chr2 158581228 158581274 -94675309 - L1MB4 LINE L1 -48 6132 6088 194 240 27 53 chr2 158581951 158582026 -94674557 - MIR3 SINE MIR 0 208 136 334 193 0 72 chr2 158582124 158582207 -94674376 - MIR SINE MIR -55 153 77 460 329 115 28 chr2 158584084 158584588 -94671995 - L1MC4 LINE L1 -355 7687 7140 552 305 46 15 chr2 158584756 158585084 -94671499 - L1MC4 LINE L1 -973 7069 6732 1032 233 75 59 chr2 158585384 158585840 -94670743 - MLT1C LTR MaLR -4 463 1 465 235 204 42 chr2 158585930 158586190 -94670393 - MLT1J1 LTR MaLR -143 303 2 183 42 0 0 chr2 158587457 158587481 -94669102 + (CA)n Simple_repeat Simple_repeat 1 24 0 201 382 53 0 chr2 158587481 158587557 -94669026 - MIR SINE MIR -99 109 30 1899 121 57 4 chr2 158588581 158588862 -94667721 - AluSx SINE Alu -16 296 1 2426 198 50 85 chr2 158589439 158589702 -94666881 - L1ME LINE L1 -592 5574 5303 2404 104 0 0 chr2 158589702 158590009 -94666574 - AluSx SINE Alu -5 307 1 2426 198 50 85 chr2 158590009 158591011 -94665572 - L1ME LINE L1 -863 5303 4340 200 364 0 15 chr2 158592433 158592499 -94664084 + L2 LINE L2 2997 3061 -211 199 348 120 0 chr2 158594759 158594851 -94661732 - L2 LINE L2 -1 3312 3210 186 43 0 0 chr2 158594984 158595007 -94661576 + (CA)n Simple_repeat Simple_repeat 2 24 0 363 221 29 0 chr2 158595008 158595076 -94661507 + MIR SINE MIR 82 151 -111 2231 115 13 0 chr2 158595373 158595677 -94660906 - AluSx SINE Alu -4 308 1 1341 160 56 0 chr2 158596979 158597192 -94659391 + AluJb SINE Alu 65 289 -23 23 54 0 0 chr2 158597210 158597247 -94659336 + AT_rich Low_complexity Low_complexity 1 37 0 286 132 38 0 chr2 158597554 158597607 -94658976 - L1MB7 LINE L1 0 6184 6130 2029 9 0 0 chr2 158597716 158597945 -94658638 + L1PA2 LINE L1 5920 6148 -7 1602 134 0 4 chr2 158598242 158598473 -94658110 - AluJb SINE Alu 0 312 83 263 290 77 27 chr2 158598864 158599047 -94657536 - L1ME LINE L1 -285 5885 5694 419 220 88 0 chr2 158599081 158599172 -94657411 + MER5A DNA MER1_type 7 105 -84 322 215 13 0 chr2 158599375 158599454 -94657129 + MARNA DNA Mariner 312 391 -195 290 269 45 52 chr2 158599536 158599670 -94656913 + MIR SINE MIR 18 150 -58 180 0 0 0 chr2 158600827 158600847 -94655736 + (A)n Simple_repeat Simple_repeat 1 20 0 2174 104 30 7 chr2 158601232 158601531 -94655052 + AluSq SINE Alu 1 306 -7 22 0 0 0 chr2 158602510 158602532 -94654051 + AT_rich Low_complexity Low_complexity 1 22 0 2072 183 59 7 chr2 158603283 158603687 -94652896 - MSTB LTR MaLR -1 425 1 2082 120 13 3 chr2 158604041 158604341 -94652242 - AluSx SINE Alu -9 303 1 2356 178 107 16 chr2 158605331 158605843 -94650740 + MER68 LTR ERV1 4 562 0 295 346 37 25 chr2 158606903 158607065 -94649518 + MIR3 SINE MIR 40 203 -5 312 216 72 54 chr2 158607126 158607237 -94649346 - MER6 DNA MER2_type 0 865 32 368 242 144 23 chr2 158607513 158607645 -94648938 - MIR3 SINE MIR 0 208 61 2269 112 0 7 chr2 158607956 158608260 -94648323 + AluSx SINE Alu 1 302 -10 1521 176 70 4 chr2 158608838 158609111 -94647472 + AluJo SINE Alu 5 295 -17 488 271 42 70 chr2 158609124 158609338 -94647245 + MIR SINE MIR 52 259 -3 377 352 66 11 chr2 158610417 158610599 -94645984 - MIR SINE MIR -26 236 45 4486 197 62 58 chr2 158610652 158611229 -94645354 - Charlie1a DNA MER1_type -1321 1440 867 1860 148 21 7 chr2 158611229 158611513 -94645070 + AluJb SINE Alu 1 288 -24 4486 197 62 58 chr2 158611513 158612366 -94644217 - Charlie1a DNA MER1_type -1894 867 5 22 35 0 0 chr2 158615192 158615221 -94641362 + AT_rich Low_complexity Low_complexity 1 29 0 1830 93 37 4 chr2 158616460 158616706 -94639877 - AluSq SINE Alu -59 254 1 21 71 0 0 chr2 158617707 158617749 -94638834 + AT_rich Low_complexity Low_complexity 1 42 0 2197 113 0 13 chr2 158618677 158618979 -94637604 - AluSq SINE Alu -15 298 1 250 303 12 55 chr2 158620717 158620882 -94635701 + CT-rich Low_complexity Low_complexity 5 162 0 2126 122 0 35 chr2 158621541 158621852 -94634731 + AluSx SINE Alu 1 300 -12 198 0 0 0 chr2 158621878 158621900 -94634683 + (T)n Simple_repeat Simple_repeat 1 22 0 765 154 71 6 chr2 158622607 158622776 -94633807 + MER65A LTR ERV1 232 411 -34 1886 160 3 3 chr2 158622856 158622868 -94633715 - AluJo SINE Alu -12 300 289 213 39 0 0 chr2 158622868 158622894 -94633689 + (ATG)n Simple_repeat Simple_repeat 2 27 0 1886 160 3 3 chr2 158622894 158623181 -94633402 - AluJo SINE Alu -22 290 1 285 305 121 42 chr2 158623424 158623614 -94632969 - MIR SINE MIR -14 248 44 1946 114 85 0 chr2 158625320 158625592 -94630991 - AluSg SINE Alu -15 295 1 2508 115 25 0 chr2 158625627 158625993 -94630590 - THE1C LTR MaLR 0 375 1 1115 141 5 38 chr2 158626634 158626819 -94629764 + AluJb SINE Alu 134 312 0 2230 122 3 7 chr2 158626829 158627132 -94629451 + AluSx SINE Alu 1 302 -10 1167 235 28 31 chr2 158627936 158628259 -94628324 + L1M4 LINE L1 4 325 -6217 222 265 0 0 chr2 158628260 158628309 -94628274 + CT-rich Low_complexity Low_complexity 2 50 0 565 143 121 43 chr2 158629630 158629852 -94626731 + AluJ SINE Alu 2 289 -23 268 256 120 43 chr2 158630559 158630676 -94625907 + MIR3 SINE MIR 38 163 -45 21 36 0 0 chr2 158630732 158630760 -94625823 + AT_rich Low_complexity Low_complexity 1 28 0 2340 101 0 0 chr2 158631257 158631565 -94625018 + AluSc SINE Alu 1 308 -1 675 207 0 0 chr2 158632405 158632521 -94624062 + L1PB3 LINE L1 6032 6147 -7 25 0 0 0 chr2 158632696 158632721 -94623862 + AT_rich Low_complexity Low_complexity 1 25 0 188 224 138 17 chr2 158632932 158632990 -94623593 - MER5A DNA MER1_type 0 189 125 286 237 79 86 chr2 158633364 158633516 -94623067 - L2 LINE L2 -40 3273 3123 689 249 64 17 chr2 158633549 158633722 -94622861 - MIR SINE MIR -51 211 31 4451 260 94 14 chr2 158633739 158635305 -94621278 - L2 LINE L2 -206 3107 1419 494 203 333 7 chr2 158635338 158635476 -94621107 - Tigger2 DNA MER2_type -1 2717 2535 194 286 261 0 chr2 158635476 158635595 -94620988 - MER5B DNA MER1_type -28 150 1 442 232 20 20 chr2 158635729 158635828 -94620755 - AluJo SINE Alu -101 211 113 2287 109 3 3 chr2 158636518 158636830 -94619753 + AluSx SINE Alu 1 312 0 207 175 0 0 chr2 158638356 158638396 -94618187 + T-rich Low_complexity Low_complexity 2 41 0 432 271 143 12 chr2 158639081 158639270 -94617313 - MIR SINE MIR -13 249 37 26 64 0 0 chr2 158639753 158639800 -94616783 + AT_rich Low_complexity Low_complexity 1 47 0 3468 145 14 0 chr2 158640390 158640895 -94615688 - MER41E LTR ERV1 0 512 1 311 295 43 14 chr2 158642543 158642682 -94613901 - LTR67 LTR ERVL 0 557 415 975 275 71 81 chr2 158643963 158644459 -94612124 - MLT1G LTR MaLR -63 527 40 272 372 36 36 chr2 158644872 158645009 -94611574 - L2 LINE L2 -25 3247 3111 1634 210 72 20 chr2 158645164 158645555 -94611028 - MLT1D LTR MaLR 0 505 95 342 122 0 0 chr2 158645573 158645622 -94610961 + MLT1D LTR MaLR 89 137 -368 276 221 11 105 chr2 158645619 158645714 -94610869 - MLT1D LTR MaLR -419 86 1 * 1172 193 55 5 chr2 158646947 158647038 -94609545 - AluJo SINE Alu -83 229 144 672 102 0 0 chr2 158647038 158647136 -94609447 + (TA)n Simple_repeat Simple_repeat 1 98 0 1172 193 55 5 chr2 158647136 158647262 -94609321 - AluJo SINE Alu -168 144 1 1683 189 3 0 chr2 158647737 158648023 -94608560 + AluJo SINE Alu 11 297 -15 1610 134 34 0 chr2 158648105 158648343 -94608240 - AluSx SINE Alu -13 299 54 27 29 0 0 chr2 158648674 158648708 -94607875 + AT_rich Low_complexity Low_complexity 1 34 0 1504 112 71 4 chr2 158649437 158649706 -94606877 - AluSq SINE Alu -25 288 2 1773 147 25 0 chr2 158649812 158650091 -94606492 + AluJb SINE Alu 1 286 -26 26 30 0 0 chr2 158651263 158651296 -94605287 + AT_rich Low_complexity Low_complexity 1 33 0 2438 67 6 16 chr2 158651770 158652083 -94604500 - AluSg SINE Alu 0 310 1 1572 213 0 0 chr2 158652298 158652589 -94603994 + AluJb SINE Alu 1 291 -21 2208 92 3 3 chr2 158652597 158652890 -94603693 + AluSc SINE Alu 1 293 -16 225 0 0 0 chr2 158654013 158654038 -94602545 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 26 30 0 0 chr2 158654494 158654527 -94602056 + AT_rich Low_complexity Low_complexity 1 33 0 213 39 0 0 chr2 158654610 158654636 -94601947 + (GA)n Simple_repeat Simple_repeat 2 27 0 * 387 0 0 0 chr2 158654635 158654678 -94601905 + (TG)n Simple_repeat Simple_repeat 1 43 0 282 29 0 0 chr2 158654677 158654712 -94601871 + (GA)n Simple_repeat Simple_repeat 1 35 0 * 2157 112 7 0 chr2 158656108 158656393 -94600190 - AluSq SINE Alu -26 287 1 1998 147 0 0 chr2 158656737 158657037 -94599546 - AluSx SINE Alu -12 300 1 603 186 54 16 chr2 158657282 158657411 -94599172 - Charlie1a DNA MER1_type 0 1455 1322 331 227 0 15 chr2 158657413 158657479 -94599104 + AluJ/FLAM SINE Alu 1 65 -237 * 5116 201 64 8 chr2 158657467 158658559 -94598024 - Charlie1a DNA MER1_type -299 1156 4 2210 102 0 3 chr2 158659181 158659466 -94597117 + AluSx SINE Alu 1 284 -28 2386 147 118 36 chr2 158659538 158660014 -94596569 - MLT2B2 LTR ERVL 0 515 1 288 0 0 0 chr2 158660180 158660212 -94596371 + (T)n Simple_repeat Simple_repeat 1 32 0 2366 100 3 0 chr2 158662063 158662374 -94594209 - AluSx SINE Alu 0 312 1 2285 125 0 0 chr2 158662432 158662744 -94593839 - AluSx SINE Alu 0 312 1 304 252 29 29 chr2 158662749 158662852 -94593731 - MIR SINE MIR -61 147 45 255 299 93 19 chr2 158664751 158664858 -94591725 - MER5A DNA MER1_type -54 135 21 252 329 104 37 chr2 158664997 158665161 -94591422 + MIR3 SINE MIR 19 193 -15 2254 106 0 0 chr2 158665378 158665670 -94590913 - AluSx SINE Alu -20 292 1 254 287 9 70 chr2 158665938 158666053 -94590530 + MER5B DNA MER1_type 4 111 -67 324 102 0 0 chr2 158666059 158666108 -94590475 + (TG)n Simple_repeat Simple_repeat 2 50 0 1641 176 10 21 chr2 158666109 158666399 -94590184 - AluJb SINE Alu -25 287 1 298 258 135 0 chr2 158666758 158666847 -94589736 - L2 LINE L2 -8 3305 3205 858 211 64 0 chr2 158667209 158667365 -94589218 + FRAM SINE Alu 1 165 -11 246 32 0 0 chr2 158667768 158667799 -94588784 + (T)n Simple_repeat Simple_repeat 1 31 0 333 0 0 0 chr2 158668245 158668282 -94588301 + (CA)n Simple_repeat Simple_repeat 2 38 0 240 35 0 0 chr2 158669135 158669164 -94587419 + (A)n Simple_repeat Simple_repeat 1 29 0 364 136 0 25 chr2 158669298 158669379 -94587204 + (TA)n Simple_repeat Simple_repeat 2 80 0 487 278 20 82 chr2 158669629 158669874 -94586709 + MER102a DNA MER1_type 91 320 -10 25 0 0 0 chr2 158670408 158670433 -94586150 + AT_rich Low_complexity Low_complexity 1 25 0 3308 208 42 4 chr2 158671073 158671784 -94584799 - L1MB7 LINE L1 -16 6168 5431 24 32 0 0 chr2 158671800 158671831 -94584752 + AT_rich Low_complexity Low_complexity 1 31 0 2322 80 0 0 chr2 158671833 158672122 -94584461 + AluSg SINE Alu 1 289 -21 2219 89 0 23 chr2 158673024 158673326 -94583257 + AluSx SINE Alu 11 305 -7 1458 213 25 16 chr2 158673334 158673648 -94582935 - Tigger7 DNA MER2_type -416 317 1 388 294 0 9 chr2 158674556 158674665 -94581918 - MIR SINE MIR -108 154 47 237 240 202 39 chr2 158674773 158674877 -94581706 + MER5A DNA MER1_type 3 123 -66 1973 164 0 0 chr2 158675008 158675307 -94581276 - AluJb SINE Alu -13 299 1 207 162 0 0 chr2 158675386 158675423 -94581160 + (TGAA)n Simple_repeat Simple_repeat 3 39 0 262 353 24 0 chr2 158675863 158675948 -94580635 - L2 LINE L2 -1 3271 3185 8715 98 45 19 chr2 158675988 158676066 -94580517 - HSMAR1 DNA Mariner -1 1286 1211 2219 101 14 3 chr2 158676066 158676363 -94580220 + AluSx SINE Alu 1 300 -12 8715 98 45 19 chr2 158676363 158677533 -94579050 - HSMAR1 DNA Mariner -76 1211 6 822 242 110 8 chr2 158677774 158678038 -94578545 + AluSg SINE Alu 1 291 -9 210 323 16 0 chr2 158678716 158678778 -94577805 - L2 LINE L2 0 3313 3251 2213 107 0 0 chr2 158679425 158679738 -94576845 + AluSg SINE Alu 1 310 0 22 0 0 0 chr2 158681263 158681285 -94575298 + AT_rich Low_complexity Low_complexity 1 22 0 2317 80 0 3 chr2 158681290 158681577 -94575006 - AluSx SINE Alu -9 303 18 312 206 29 0 chr2 158684159 158684227 -94572356 - L1MB7 LINE L1 -751 5370 5301 234 143 0 0 chr2 158684514 158684563 -94572020 + (TCC)n Simple_repeat Simple_repeat 2 50 0 214 191 0 0 chr2 158687776 158687818 -94568765 + T-rich Low_complexity Low_complexity 1 42 0 22 35 0 0 chr2 158688746 158688775 -94567808 + AT_rich Low_complexity Low_complexity 1 29 0 210 71 0 0 chr2 158688997 158689025 -94567558 + (TCCCC)n Simple_repeat Simple_repeat 5 32 0 314 147 15 0 chr2 158689467 158689535 -94567048 + CT-rich Low_complexity Low_complexity 1 69 0 183 80 0 0 chr2 158689553 158689578 -94567005 + (TTCC)n Simple_repeat Simple_repeat 4 28 0 1797 119 28 18 chr2 158689579 158689864 -94566719 - AluSq SINE Alu -24 289 2 1773 147 25 0 chr2 158689971 158690250 -94566333 + AluJb SINE Alu 1 286 -26 44 0 0 0 chr2 158691419 158691463 -94565120 + AT_rich Low_complexity Low_complexity 1 44 0 2054 136 3 0 chr2 158691463 158691750 -94564833 - AluSx SINE Alu -24 288 1 411 277 17 0 chr2 158695414 158695533 -94561050 + L1ME LINE L1 5532 5652 -469 1043 133 17 12 chr2 158696345 158696518 -94560065 - Tigger7 DNA MER2_type -8 2479 2306 2176 90 3 23 chr2 158696526 158696827 -94559756 + AluSx SINE Alu 11 305 -7 1446 217 25 16 chr2 158696835 158697149 -94559434 - Tigger7 DNA MER2_type -416 317 1 388 294 0 9 chr2 158698056 158698165 -94558418 - MIR SINE MIR -108 154 47 237 240 202 39 chr2 158698273 158698377 -94558206 + MER5A DNA MER1_type 3 123 -66 1973 164 0 0 chr2 158698508 158698807 -94557776 - AluJb SINE Alu -13 299 1 207 162 0 0 chr2 158698886 158698923 -94557660 + (TGAA)n Simple_repeat Simple_repeat 3 39 0 262 353 24 0 chr2 158699363 158699448 -94557135 - L2 LINE L2 -1 3271 3185 8715 98 45 19 chr2 158699488 158699566 -94557017 - HSMAR1 DNA Mariner -1 1286 1211 2219 101 14 3 chr2 158699566 158699863 -94556720 + AluSx SINE Alu 1 300 -12 8715 98 45 19 chr2 158699863 158701033 -94555550 - HSMAR1 DNA Mariner -76 1211 6 535 189 0 0 chr2 158701329 158701419 -94555164 + FRAM SINE Alu 71 160 -16 333 253 23 0 chr2 158701543 158701630 -94554953 + MIR SINE MIR 65 153 -109 211 325 43 26 chr2 158702510 158702627 -94553956 + L3 LINE CR1 1441 1559 -18 852 174 108 63 chr2 158707024 158707311 -94549272 - L1MC5 LINE L1 -59 7902 7603 2278 78 17 3 chr2 158707353 158707646 -94548937 - AluY SINE Alu -14 297 1 1993 120 3 11 chr2 158708131 158708443 -94548140 + AluSx SINE Alu 1 310 0 241 191 24 83 chr2 158709321 158709355 -94547228 - MIR SINE MIR -4 258 224 1894 158 30 0 chr2 158709355 158709653 -94546930 + AluJb SINE Alu 1 307 -5 241 191 24 83 chr2 158709653 158709702 -94546881 - MIR SINE MIR -38 224 180 1074 184 40 72 chr2 158711447 158711724 -94544859 + AluJb SINE Alu 1 268 -44 487 246 18 0 chr2 158711856 158711966 -94544617 - Charlie8 DNA MER1_type -2198 219 108 604 205 54 0 chr2 158712488 158712600 -94543983 + FLAM_A SINE Alu 8 125 -17 25 51 0 0 chr2 158714770 158714809 -94541774 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr2 158715806 158715828 -94540755 + AT_rich Low_complexity Low_complexity 1 22 0 244 267 164 6 chr2 158715895 158716052 -94540531 - MIR SINE MIR -67 141 10 1549 205 32 0 chr2 158716504 158716787 -94539796 - AluJb SINE Alu -20 292 1 21 36 0 0 chr2 158717139 158717167 -94539416 + AT_rich Low_complexity Low_complexity 1 28 0 382 209 114 19 chr2 158718026 158718131 -94538452 - L2 LINE L2 -3 3310 3196 23 54 0 0 chr2 158718467 158718504 -94538079 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr2 158720590 158720618 -94535965 + AT_rich Low_complexity Low_complexity 1 28 0 2178 97 3 3 chr2 158722013 158722303 -94534280 - AluSg SINE Alu -20 290 1 214 314 0 29 chr2 158723904 158723974 -94532609 - MER5A DNA MER1_type -86 103 36 * 254 253 13 40 chr2 158723921 158723996 -94532587 + MER5B DNA MER1_type 104 176 -2 225 180 0 0 chr2 158724055 158724105 -94532478 + (CA)n Simple_repeat Simple_repeat 2 51 0 2326 108 0 0 chr2 158725007 158725312 -94531271 - AluSx SINE Alu -7 305 1 2497 63 3 0 chr2 158725319 158725620 -94530963 - AluY SINE Alu -9 302 1 379 305 172 0 chr2 158726298 158726449 -94530134 - MER5A DNA MER1_type 0 189 13 1116 202 103 79 chr2 158726468 158726760 -94529823 + AluJo SINE Alu 1 299 -3 324 248 271 70 chr2 158726981 158727195 -94529388 + MIR SINE MIR 1 257 -5 2185 105 0 13 chr2 158727241 158727547 -94529036 - AluSx SINE Alu -8 304 3 26 64 0 0 chr2 158728297 158728344 -94528239 + AT_rich Low_complexity Low_complexity 1 47 0 25 31 0 0 chr2 158728359 158728391 -94528192 + AT_rich Low_complexity Low_complexity 1 32 0 944 88 196 0 chr2 158728676 158728824 -94527759 - MER30 DNA MER1_type 0 230 54 1532 128 116 4 chr2 158730258 158730516 -94526067 + MER1B DNA MER1_type 53 339 0 716 183 114 58 chr2 158730570 158730793 -94525790 + MER33 DNA MER1_type 1 227 -88 547 165 6 153 chr2 158731438 158731614 -94524969 - MER20 DNA MER1_type -13 206 57 610 269 20 13 chr2 158732059 158732208 -94524375 - MER5A DNA MER1_type -28 161 12 407 268 0 92 chr2 158732874 158733016 -94523567 + MLT1J LTR MaLR 30 195 -288 594 214 103 0 chr2 158733121 158733247 -94523336 + MER5A DNA MER1_type 1 139 -50 1781 141 13 46 chr2 158733399 158733703 -94522880 - AluJb SINE Alu -18 294 1 245 157 59 0 chr2 158733713 158733764 -94522819 + MER5A DNA MER1_type 136 189 0 547 294 105 34 chr2 158733858 158734096 -94522487 + MIR SINE MIR 7 261 -1 887 115 0 0 chr2 158734797 158734934 -94521649 + FLAM_C SINE Alu 5 141 0 31 68 0 0 chr2 158736793 158736852 -94519731 + AT_rich Low_complexity Low_complexity 1 59 0 208 0 62 0 chr2 158736921 158736953 -94519630 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1866 140 19 32 chr2 158737313 158737627 -94518956 - AluJb SINE Alu -2 310 1 27 96 0 0 chr2 158738118 158738201 -94518382 + AT_rich Low_complexity Low_complexity 1 83 0 22 35 0 0 chr2 158738454 158738483 -94518100 + AT_rich Low_complexity Low_complexity 1 29 0 485 325 62 5 chr2 158739509 158739718 -94516865 + MER58A DNA MER1_type 4 224 0 303 301 68 20 chr2 158740679 158740825 -94515758 - L1MC/D LINE L1 -2319 5489 5337 315 211 0 0 chr2 158740831 158740888 -94515695 + AluS SINE Alu 1 57 -244 1121 130 6 17 chr2 158740889 158741066 -94515517 + AluJb SINE Alu 132 306 -6 1693 154 48 11 chr2 158741068 158741340 -94515243 - AluJo SINE Alu -30 282 1 549 192 39 0 chr2 158741453 158741583 -94515000 - MER96B DNA MER1_type? -241 176 42 288 53 0 0 chr2 158742044 158742082 -94514501 + (CTG)n Simple_repeat Simple_repeat 3 40 0 22 0 0 0 chr2 158743553 158743575 -94513008 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 158744638 158744660 -94511923 + AT_rich Low_complexity Low_complexity 1 22 0 224 310 0 0 chr2 158745126 158745184 -94511399 - MIR SINE MIR -157 105 48 2348 41 41 17 chr2 158745256 158745551 -94511032 - AluY SINE Alu -9 302 1 219 33 0 0 chr2 158747257 158747287 -94509296 + L3 LINE CR1 789 818 -759 1085 238 104 80 chr2 158747586 158748183 -94508400 - HsTC2 DNA Tc2 -14 1884 1274 1916 122 43 23 chr2 158748246 158748549 -94508034 + MER1A DNA MER1_type 1 309 -220 312 274 38 47 chr2 158749141 158749247 -94507336 - MIR SINE MIR -69 193 89 302 271 166 50 chr2 158749521 158749883 -94506700 + L1ME LINE L1 5388 5791 -330 2242 110 3 7 chr2 158750265 158750566 -94506017 + AluSx SINE Alu 4 303 -9 392 301 153 62 chr2 158750890 158751472 -94505111 + L1MC1 LINE L1 3757 4391 -1755 1429 147 5 0 chr2 158751480 158751698 -94504885 - AluJo SINE Alu -10 302 84 325 338 104 4 chr2 158751708 158751939 -94504644 + L1M4 LINE L1 2296 2549 -3597 4640 179 68 22 chr2 158752200 158752970 -94503613 + L1MC1 LINE L1 5140 5982 -351 207 0 0 0 chr2 158752970 158752993 -94503590 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4640 179 68 22 chr2 158752993 158753345 -94503238 + L1MC1 LINE L1 5982 6316 -17 1663 153 35 7 chr2 158753423 158753705 -94502878 - AluJb SINE Alu -22 290 1 398 256 97 41 chr2 158754060 158754348 -94502235 + L1MC/D LINE L1 5191 5509 -706 2011 92 56 30 chr2 158754944 158755248 -94501335 + AluSx SINE Alu 1 312 0 237 132 0 0 chr2 158755669 158755707 -94500876 + (TA)n Simple_repeat Simple_repeat 1 38 0 2204 126 3 0 chr2 158755726 158756036 -94500547 + AluSx SINE Alu 2 312 0 973 201 0 28 chr2 158756802 158757016 -94499567 - MER3 DNA MER1_type -1 208 1 206 267 17 33 chr2 158757763 158757823 -94498760 - L2 LINE L2 -5 3267 3209 240 250 102 11 chr2 158757865 158757953 -94498630 - Charlie8 DNA MER1_type -2296 121 26 2177 97 31 0 chr2 158758001 158758290 -94498293 + AluSg SINE Alu 2 299 -11 833 264 65 22 chr2 158758717 158759039 -94497544 + MER46C DNA MER2_type 2 337 -1 1736 166 20 20 chr2 158759482 158759783 -94496800 + AluJo SINE Alu 7 307 -5 194 139 56 0 chr2 158760135 158760171 -94496412 + L2 LINE L2 3234 3271 -1 2216 96 13 0 chr2 158761615 158761916 -94494667 + AluY SINE Alu 2 306 -5 1770 173 51 12 chr2 158762989 158763324 -94493259 - MER7A DNA MER2_type 0 346 1 1308 134 51 0 chr2 158764571 158764788 -94491795 - MER30 DNA MER1_type 0 230 3 481 320 80 5 chr2 158765036 158765236 -94491347 + MIR SINE MIR 21 235 -27 2170 103 23 3 chr2 158766148 158766450 -94490133 + AluSc SINE Alu 1 308 -1 1721 232 20 3 chr2 158766743 158767101 -94489482 + LTR10B LTR ERV1 184 547 0 26029 212 38 50 chr2 158767101 158773748 -94482835 + HERVI LTR ERV1 2 5384 -1265 2133 247 32 16 chr2 158773750 158774320 -94482263 + HERVI LTR ERV1 5990 6568 -81 1330 267 23 3 chr2 158774320 158774623 -94481960 + LTR10B LTR ERV1 239 547 0 913 182 134 5 chr2 158774720 158774929 -94481654 - MER46A DNA MER2_type 0 236 1 1353 172 109 4 chr2 158775233 158775509 -94481074 + AluSx SINE Alu 1 303 0 2137 125 7 0 chr2 158775556 158775852 -94480731 - AluSq SINE Alu -15 298 1 254 204 136 10 chr2 158776173 158776276 -94480307 + MER103 DNA DNA 7 122 -44 327 147 40 0 chr2 158776758 158776833 -94479750 + MER2 DNA MER2_type 132 209 -136 458 215 41 41 chr2 158777142 158777263 -94479320 - L2 LINE L2 -1 3271 3151 200 343 20 50 chr2 158777751 158777850 -94478733 - L2 LINE L2 -650 2664 2569 322 230 81 23 chr2 158778079 158778166 -94478417 - MIR3 SINE MIR -8 200 109 1725 133 4 8 chr2 158778355 158778611 -94477972 - AluJb SINE Alu -19 293 39 232 255 0 0 chr2 158778720 158778767 -94477816 + L3 LINE CR1 1529 1575 -2 225 65 0 0 chr2 158785692 158785723 -94470860 + (A)n Simple_repeat Simple_repeat 1 31 0 292 267 40 13 chr2 158786305 158786380 -94470203 - MIR SINE MIR -155 107 31 1857 153 0 10 chr2 158786751 158787039 -94469544 + AluJb SINE Alu 1 285 -27 2119 110 0 17 chr2 158788562 158788863 -94467720 + AluSx SINE Alu 1 296 -16 603 229 62 56 chr2 158790634 158790813 -94465770 - MER5A DNA MER1_type -9 180 1 1037 201 113 3 chr2 158790963 158791272 -94465311 + Looper DNA T2_type 10 352 -1206 2367 200 59 29 chr2 158791315 158791944 -94464639 + Looper DNA T2_type 910 1557 -1 353 160 70 30 chr2 158791965 158792065 -94464518 + L1MC5 LINE L1 7805 7908 -53 183 289 0 0 chr2 158792090 158792142 -94464441 + MER5B DNA MER1_type 125 176 -2 6052 146 62 31 chr2 158792636 158793830 -94462753 + Tigger3b DNA MER2_type 1 1231 0 288 287 43 0 chr2 158794068 158794162 -94462421 - L1MC/D LINE L1 -1949 5859 5762 2026 126 7 0 chr2 158794719 158795013 -94461570 + AluSc SINE Alu 1 296 -13 1586 123 0 0 chr2 158795030 158795250 -94461333 + AluSg1 SINE Alu 1 220 -89 210 37 0 0 chr2 158795271 158795298 -94461285 + (TG)n Simple_repeat Simple_repeat 2 28 0 206 283 101 40 chr2 158796115 158796214 -94460369 - L2 LINE L2 -917 2397 2293 1256 237 80 100 chr2 158797825 158798537 -94458046 - L1MC4a LINE L1 -287 5883 5268 1271 168 145 10 chr2 158798661 158798964 -94457619 + MER2 DNA MER2_type 1 344 0 312 317 50 40 chr2 158799002 158799204 -94457379 - L1MC4a LINE L1 -1037 5109 4906 1920 142 11 0 chr2 158799253 158799556 -94457027 - AluSx SINE Alu 0 306 1 551 277 31 31 chr2 158799755 158799950 -94456633 + L2 LINE L2 3119 3313 0 812 225 0 0 chr2 158800488 158800648 -94455935 - FRAM SINE Alu -6 160 1 203 347 153 0 chr2 158802318 158802442 -94454141 + L2 LINE L2 2238 2380 -934 1562 161 98 9 chr2 158802653 158802970 -94453613 - MER2 DNA MER2_type 0 345 1 185 375 62 39 chr2 158803002 158803261 -94453322 + L2 LINE L2 2713 2977 -337 2433 110 11 11 chr2 158803464 158803828 -94452755 - THE1B LTR MaLR 0 364 1 9390 108 33 91 chr2 158803828 158804980 -94451603 - THE1B-int LTR MaLR 0 1580 554 2456 57 0 10 chr2 158804980 158805278 -94451305 - AluY SINE Alu -16 295 1 9390 108 33 91 chr2 158805278 158805802 -94450781 - THE1B-int LTR MaLR -1026 554 1 2518 105 17 8 chr2 158805802 158806163 -94450420 - THE1B LTR MaLR 0 364 1 1477 201 13 26 chr2 158806177 158806481 -94450102 - AluJb SINE Alu -12 300 1 22 0 0 0 chr2 158806605 158806627 -94449956 + AT_rich Low_complexity Low_complexity 1 22 0 197 214 41 0 chr2 158806657 158806755 -94449828 + (TA)n Simple_repeat Simple_repeat 2 103 0 413 73 18 0 chr2 158806757 158806812 -94449771 + FRAM/FAM SINE Alu 23 78 -98 1776 174 3 10 chr2 158808368 158808679 -94447904 + AluJo SINE Alu 1 309 -3 316 241 9 102 chr2 158808895 158809003 -94447580 - MIR SINE MIR -100 162 65 25 51 0 0 chr2 158810861 158810900 -94445683 + AT_rich Low_complexity Low_complexity 1 39 0 2000 137 0 28 chr2 158812089 158812410 -94444173 - AluJb SINE Alu 0 312 1 312 326 82 20 chr2 158812584 158812731 -94443852 + MIR SINE MIR 15 170 -92 1703 145 29 29 chr2 158812901 158813211 -94443372 - AluJo SINE Alu -2 310 1 219 171 71 29 chr2 158813227 158813297 -94443286 - MIR SINE MIR -64 198 126 2130 112 26 3 chr2 158813649 158813952 -94442631 - AluSx SINE Alu -2 310 1 712 186 8 0 chr2 158813958 158814082 -94442501 - FLAM_C SINE Alu -18 125 1 23 33 0 0 chr2 158815198 158815228 -94441355 + AT_rich Low_complexity Low_complexity 1 30 0 288 91 0 0 chr2 158815382 158815426 -94441157 + (CA)n Simple_repeat Simple_repeat 2 45 0 565 301 146 14 chr2 158815622 158815841 -94440742 - MIR SINE MIR -4 258 11 2000 110 24 14 chr2 158816280 158816572 -94440011 + AluSx SINE Alu 3 297 -15 197 116 0 47 chr2 158816585 158816628 -94439955 + (GGAA)n Simple_repeat Simple_repeat 4 44 0 4255 132 15 44 chr2 158817288 158818076 -94438507 - L1MA5 LINE L1 0 6300 5536 380 195 98 12 chr2 158818411 158818493 -94438090 + AluJb SINE Alu 81 169 -133 3672 103 92 7 chr2 158818503 158819102 -94437481 - MER51C LTR ERV1 -10 630 1 802 158 0 8 chr2 158819102 158819235 -94437348 + AluJb SINE Alu 166 297 -15 2389 53 17 17 chr2 158819781 158820080 -94436503 - AluY SINE Alu -10 301 3 3932 161 34 41 chr2 158820216 158820954 -94435629 - L1MB5 LINE L1 -80 6094 5348 7902 58 8 7 chr2 158820954 158821960 -94434623 + LTR13 LTR ERVK 1 1007 0 3932 161 34 41 chr2 158821960 158822366 -94434217 - L1MB5 LINE L1 -826 5348 4941 2267 253 128 18 chr2 158822397 158823470 -94433113 + L1ME3 LINE L1 4984 6162 0 1460 172 60 30 chr2 158824118 158824449 -94432134 + MER2 DNA MER2_type 1 341 -3 25 31 0 0 chr2 158826945 158826977 -94429606 + AT_rich Low_complexity Low_complexity 1 32 0 2056 139 38 15 chr2 158827635 158827974 -94428609 + MER7A DNA MER2_type 1 345 -1 249 197 40 40 chr2 158828430 158828506 -94428077 + MLT1K LTR MaLR 501 576 -12 228 241 0 35 chr2 158828832 158828890 -94427693 + MIR SINE MIR 99 154 -108 252 295 56 50 chr2 158828910 158829212 -94427371 + L1M4 LINE L1 2942 3245 -2901 1639 227 96 56 chr2 158829297 158829830 -94426753 - MLT2B3 LTR ERVL 0 554 1 385 289 118 24 chr2 158830768 158831073 -94425510 - ERVL LTR ERVL -779 4914 4639 1666 156 80 0 chr2 158831073 158831361 -94425222 + AluSx SINE Alu 1 311 -1 385 289 118 24 chr2 158831361 158831606 -94424977 - ERVL LTR ERVL -1054 4639 4296 913 302 80 45 chr2 158831697 158832319 -94424264 - ERVL LTR ERVL -1343 4142 3531 792 166 51 123 chr2 158832342 158832577 -94424006 + MER20 DNA MER1_type 1 218 -1 342 313 91 28 chr2 158832596 158832772 -94423811 - ERVL LTR ERVL -2314 3450 3264 337 306 38 25 chr2 158833202 158833362 -94423221 + ERVL LTR ERVL 5214 5375 -389 369 0 0 0 chr2 158833696 158833737 -94422846 + (TG)n Simple_repeat Simple_repeat 2 42 0 2057 127 7 0 chr2 158833738 158834021 -94422562 - AluSx SINE Alu -27 285 1 2416 110 23 11 chr2 158834040 158834394 -94422189 - THE1C LTR MaLR -1 374 17 338 259 26 35 chr2 158834826 158834942 -94421641 + LTR67 LTR ERVL 431 545 -12 3586 211 23 47 chr2 158835154 158836147 -94420436 - LTR5 LTR ERVK 0 969 1 1635 198 0 23 chr2 158836183 158836486 -94420097 - AluJb SINE Alu -16 296 1 2079 97 44 7 chr2 158836715 158837013 -94419570 + AluSx SINE Alu 1 309 -3 22 0 0 0 chr2 158837150 158837172 -94419411 + AT_rich Low_complexity Low_complexity 1 22 0 1004 161 17 17 chr2 158837656 158837673 -94418910 + MER2 DNA MER2_type 32 48 -297 261 0 0 0 chr2 158837673 158837702 -94418881 + (CCCCAA)n Simple_repeat Simple_repeat 1 29 0 1004 161 17 17 chr2 158837702 158837858 -94418725 + MER2 DNA MER2_type 47 205 -140 2126 104 10 7 chr2 158838804 158839112 -94417471 + AluSg SINE Alu 1 309 -1 22 0 0 0 chr2 158839135 158839157 -94417426 + AT_rich Low_complexity Low_complexity 1 22 0 1738 181 7 0 chr2 158839833 158840121 -94416462 - AluJo SINE Alu -22 290 1 347 265 219 43 chr2 158840571 158840850 -94415733 + L1ME4a LINE L1 5576 5903 -218 298 275 116 7 chr2 158840857 158840995 -94415588 + L1ME4a LINE L1 5946 6098 -23 181 177 81 32 chr2 158841012 158841074 -94415509 + MIR SINE MIR 128 192 -70 581 243 34 42 chr2 158841210 158841400 -94415183 + L1MC4a LINE L1 5658 5843 -340 755 171 0 55 chr2 158841717 158841863 -94414720 + FLAM_C SINE Alu 5 142 -1 958 212 17 11 chr2 158842094 158842273 -94414310 + MER77 LTR ERV1 280 459 -146 308 133 17 0 chr2 158842502 158842562 -94414021 + GA-rich Low_complexity Low_complexity 2 62 0 766 186 45 45 chr2 158842802 158842979 -94413604 + MER5B DNA MER1_type 2 178 0 261 0 0 0 chr2 158843030 158843059 -94413524 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1950 130 3 13 chr2 158843084 158843385 -94413198 - AluJb SINE Alu 0 312 15 216 200 0 0 chr2 158843395 158843440 -94413143 + T-rich Low_complexity Low_complexity 2 46 0 223 324 76 29 chr2 158843856 158843961 -94412622 - L2 LINE L2 -1 3312 3203 1555 35 0 0 chr2 158844127 158844301 -94412282 + L1PA4 LINE L1 5977 6150 -5 2308 71 3 17 chr2 158844772 158845069 -94411514 + AluY SINE Alu 7 299 -12 1423 125 94 45 chr2 158845180 158845468 -94411115 - MLT2C1 LTR ERVL -95 302 1 450 125 0 0 chr2 158845468 158845540 -94411043 - Ricksha DNA DNA -1701 345 274 3921 139 58 32 chr2 158845746 158846252 -94410331 - L1MA9 LINE L1 -1 6311 5820 342 0 0 0 chr2 158846252 158846290 -94410293 + (CA)n Simple_repeat Simple_repeat 1 38 0 3921 139 58 32 chr2 158846290 158846325 -94410258 - L1MA9 LINE L1 -492 5820 5787 2143 137 35 30 chr2 158846325 158846698 -94409885 - THE1C LTR MaLR 0 375 1 3921 139 58 32 chr2 158846698 158846874 -94409709 - L1MA9 LINE L1 -525 5787 5574 1222 172 158 7 chr2 158846875 158847154 -94409429 - ERVL-C1 LTR ERVL -172 5592 5272 * 3462 154 18 4 chr2 158847148 158847706 -94408877 - ERVL-C1 LTR ERVL -1144 4620 4055 1340 168 55 11 chr2 158847699 158847973 -94408610 - ERVL LTR ERVL -4410 1354 1069 * 2481 220 65 38 chr2 158848069 158848650 -94407933 + MER77 LTR ERV1 9 605 0 2272 95 20 0 chr2 158848709 158849003 -94407580 + AluSx SINE Alu 1 300 -12 716 161 16 16 chr2 158849156 158849280 -94407303 - FLAM_A SINE Alu -9 124 1 483 160 0 0 chr2 158849335 158849410 -94407173 - AluSx SINE Alu -17 292 218 1234 111 12 0 chr2 158849410 158849582 -94407001 - AluSx SINE Alu -124 188 15 1488 294 19 28 chr2 158849648 158850114 -94406469 + LTR16B LTR ERVL 1 462 -2 240 261 39 78 chr2 158850118 158850137 -94406446 - L1MC/D LINE L1 -1911 5897 5879 686 272 91 40 chr2 158850137 158850534 -94406049 - L1ME2 LINE L1 -280 5884 5468 614 188 70 65 chr2 158850542 158850728 -94405855 + L1MB7 LINE L1 5722 5908 -270 237 139 0 0 chr2 158851401 158851444 -94405139 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 2027 123 55 76 chr2 158851768 158852151 -94404432 - THE1C LTR MaLR 0 375 1 6690 121 43 13 chr2 158852151 158853160 -94403423 - THE1C-int LTR MaLR 0 1580 542 1809 138 9 22 chr2 158853160 158853509 -94403074 - MER4A LTR ERV1 0 664 262 571 155 0 10 chr2 158853510 158853607 -94402976 - MER4A LTR ERV1 -567 97 2 3045 130 90 4 chr2 158853608 158854109 -94402474 - THE1C-int LTR MaLR -1035 545 2 1775 149 117 20 chr2 158854110 158854452 -94402131 - THE1C LTR MaLR 0 375 1 352 257 76 19 chr2 158855174 158855279 -94401304 - L2 LINE L2 -1 3312 3202 22 0 0 0 chr2 158855336 158855358 -94401225 + AT_rich Low_complexity Low_complexity 1 22 0 192 271 104 0 chr2 158855596 158855644 -94400939 - L2 LINE L2 -11 3261 3209 808 179 0 0 chr2 158855684 158855818 -94400765 + FRAM SINE Alu 38 171 -5 368 325 57 6 chr2 158855819 158855976 -94400607 - MIR SINE MIR -95 167 3 2329 56 0 14 chr2 158856011 158856336 -94400247 + AluY SINE Alu 1 321 0 1288 142 36 36 chr2 158856626 158856826 -94399757 - AluJb SINE Alu -6 306 104 4295 112 90 47 chr2 158856826 158857578 -94399005 + LTR1 LTR ERV1 1 785 0 1288 142 36 36 chr2 158857578 158857602 -94398981 - AluJb SINE Alu -207 105 82 32 43 0 0 chr2 158857670 158857716 -94398867 + AT_rich Low_complexity Low_complexity 1 46 0 1367 228 196 58 chr2 158858140 158858777 -94397806 + MER50 LTR ERV1 10 734 0 408 206 54 0 chr2 158858802 158858894 -94397689 - MIR SINE MIR -72 136 40 237 293 65 49 chr2 158859259 158859304 -94397279 - MIR3 SINE MIR -33 175 132 5029 81 51 2 chr2 158859304 158859933 -94396650 + PABL_A LTR ERV1 1 660 0 237 293 65 49 chr2 158859933 158860010 -94396573 - MIR3 SINE MIR -76 132 51 1011 127 41 118 chr2 158860907 158861047 -94395536 - MER7A DNA MER2_type -2835 203 87 2338 82 0 0 chr2 158861047 158861338 -94395245 - AluSg SINE Alu -19 291 1 1011 127 41 118 chr2 158861338 158861418 -94395165 - MER7A DNA MER2_type -2951 87 2 2406 59 0 26 chr2 158861660 158861964 -94394619 - AluY SINE Alu 0 311 16 1424 165 59 22 chr2 158862723 158863044 -94393539 + LTR37A LTR ERV1 92 424 -2 240 309 71 40 chr2 158863472 158863532 -94393051 - L2 LINE L2 -6 3266 3209 823 231 136 69 chr2 158863532 158864055 -94392528 + MER34B LTR ERV1 5 562 -3 240 309 71 40 chr2 158864055 158864120 -94392463 - L2 LINE L2 -63 3209 3137 3439 154 16 2 chr2 158864149 158864701 -94391882 - LTR24B LTR ERV1 -7 569 10 282 120 0 20 chr2 158864779 158864829 -94391754 - L2 LINE L2 -208 3064 3016 1053 167 17 0 chr2 158864840 158865014 -94391569 + MLT1A1 LTR MaLR 1 177 -188 4105 135 8 94 chr2 158865014 158865770 -94390813 - LTR8 LTR ERV1 0 691 1 4300 133 40 38 chr2 158865896 158867176 -94389407 + pTR5 LTR ERV1 741 2468 0 1559 176 22 72 chr2 158867214 158867629 -94388954 + MER110-int LTR ERV1 4106 4499 -1832 1885 144 75 33 chr2 158867643 158868003 -94388580 + THE1C LTR MaLR 1 375 0 375 376 14 11 chr2 158868024 158868303 -94388280 + MER110-int LTR ERV1 2280 2559 -2088 1080 130 68 232 chr2 158869203 158869703 -94386880 + LTR23 LTR ERV1 10 427 -10 1229 242 47 27 chr2 158870066 158870509 -94386074 - LTR48B LTR ERV1 0 644 137 306 244 0 49 chr2 158870524 158870606 -94385977 - MER34 LTR ERV1 -464 78 1 2787 124 34 23 chr2 158870610 158871053 -94385530 + MER83 LTR ERV1 1 448 0 1114 159 0 21 chr2 158871355 158871544 -94385039 - MLT1A1 LTR MaLR -6 359 175 3625 133 14 100 chr2 158871545 158872268 -94384315 + LTR8 LTR ERV1 1 661 -30 931 248 95 48 chr2 158872554 158873051 -94383532 - pTR5 LTR ERV1 -1178 1260 741 631 101 0 0 chr2 158873048 158873137 -94383446 - LTR23-int LTR ERV1 -2229 4102 4014 * 786 200 66 37 chr2 158873147 158873534 -94383049 - LTR23-int LTR ERV1 -1950 2930 1922 3138 167 38 95 chr2 158873761 158874148 -94382435 - LTR23-int LTR ERV1 -2878 3453 3045 5486 151 7 102 chr2 158874148 158875044 -94381539 - L1PA16 LINE L1 -2 6164 5280 3138 167 38 95 chr2 158875044 158875214 -94381369 - LTR23-int LTR ERV1 -3286 3045 2953 2004 120 7 23 chr2 158875214 158875515 -94381068 + AluSx SINE Alu 2 297 -15 3138 167 38 95 chr2 158875515 158875754 -94380829 - LTR23-int LTR ERV1 -3378 2953 2702 2369 199 29 52 chr2 158875758 158876074 -94380509 - L1 LINE L1 -2144 4002 3707 1248 201 19 19 chr2 158876074 158876387 -94380196 - AluSq SINE Alu 0 313 1 2369 199 29 52 chr2 158876387 158876718 -94379865 - L1 LINE L1 -2439 3707 3370 1923 141 16 16 chr2 158877168 158877472 -94379111 - AluSq SINE Alu -9 304 1 13425 177 21 77 chr2 158877472 158878779 -94377804 - L1 LINE L1 -2449 4399 3020 2496 84 0 0 chr2 158878779 158879087 -94377496 - AluY SINE Alu -3 308 1 13425 177 21 77 chr2 158879087 158879332 -94377251 - L1 LINE L1 -3828 3020 2763 2095 138 3 3 chr2 158879332 158879636 -94376947 - AluSq SINE Alu -9 304 1 13425 177 21 77 chr2 158879636 158879754 -94376829 - L1 LINE L1 -4085 2763 2640 1871 146 14 14 chr2 158879754 158880049 -94376534 - AluJb SINE Alu -17 295 1 13425 177 21 77 chr2 158880049 158882724 -94373859 - L1 LINE L1 -4208 2640 324 4989 109 14 30 chr2 158882724 158882888 -94373695 + LTR8 LTR ERV1 4 169 -522 1818 129 28 3 chr2 158882888 158883174 -94373409 + AluSx SINE Alu 19 311 -1 4989 109 14 30 chr2 158883174 158883708 -94372875 + LTR8 LTR ERV1 169 691 0 13425 177 21 77 chr2 158883708 158884013 -94372570 - L1 LINE L1 -6524 324 3 527 310 77 43 chr2 158884047 158884441 -94372142 - L1M4 LINE L1 -1548 4598 4176 925 280 76 55 chr2 158884441 158884952 -94371631 - LTR33A LTR ERVL 0 523 2 527 310 77 43 chr2 158884952 158885141 -94371442 - L1M4 LINE L1 -1970 4176 3995 25 0 0 0 chr2 158885142 158885167 -94371416 + AT_rich Low_complexity Low_complexity 1 25 0 242 325 0 0 chr2 158885205 158885285 -94371298 - L1M4 LINE L1 -2275 3871 3792 808 158 0 0 chr2 158885296 158885429 -94371154 - AluJb SINE Alu 0 312 180 214 327 113 7 chr2 158885833 158885983 -94370600 + MIR SINE MIR 65 230 -32 204 311 144 0 chr2 158886021 158886111 -94370472 + MIR SINE MIR 38 140 -68 280 343 147 0 chr2 158886160 158886303 -94370280 - MIR SINE MIR -79 183 20 299 325 49 0 chr2 158887170 158887293 -94369290 + MER94 DNA DNA 4 132 -2 2225 116 10 6 chr2 158888406 158888717 -94367866 - AluSx SINE Alu 0 312 1 1370 199 37 43 chr2 158888885 158889082 -94367501 - MLT1A2 LTR MaLR 0 374 178 258 32 0 0 chr2 158889082 158889113 -94367470 + (TA)n Simple_repeat Simple_repeat 1 31 0 1370 199 37 43 chr2 158889113 158889291 -94367292 - MLT1A2 LTR MaLR -196 178 1 1653 271 58 9 chr2 158889590 158890173 -94366410 + MER20B DNA MER1_type 23 634 -149 339 208 73 0 chr2 158890175 158890232 -94366351 + MER53 DNA DNA 1 69 -120 2333 97 0 22 chr2 158890232 158890543 -94366040 + AluSx SINE Alu 1 304 -8 339 208 73 0 chr2 158890543 158890581 -94366002 + MER53 DNA DNA 69 103 -86 838 207 5 83 chr2 158891001 158891218 -94365365 - MLT1A1 LTR MaLR 0 365 166 446 275 123 52 chr2 158891561 158891885 -94364698 + L2 LINE L2 2710 3082 -190 200 342 162 0 chr2 158892078 158892195 -94364388 + L2 LINE L2 3134 3269 -3 385 248 28 73 chr2 158892340 158892449 -94364134 - L2 LINE L2 0 3272 3169 377 268 41 0 chr2 158892546 158892669 -94363914 + Charlie7 DNA MER1_type 258 385 -2227 1183 194 0 16 chr2 158893207 158893454 -94363129 + Charlie7 DNA MER1_type 391 633 -1979 2442 86 0 3 chr2 158893468 158893769 -94362814 + AluY SINE Alu 1 300 -11 337 63 35 0 chr2 158894089 158894201 -94362382 + MADE1 DNA Mariner 1 80 0 2543 133 41 12 chr2 158894225 158894638 -94361945 - MSTA LTR MaLR -3 425 1 382 358 24 36 chr2 158894724 158894889 -94361694 + MER5B DNA MER1_type 2 164 -14 299 235 0 98 chr2 158894951 158895053 -94361530 + MER5A DNA MER1_type 20 111 -78 223 341 56 0 chr2 158895108 158895234 -94361349 - MIR SINE MIR -27 235 103 201 308 0 15 chr2 158895281 158895346 -94361237 - MER5B DNA MER1_type -113 65 2 393 269 50 28 chr2 158896216 158896357 -94360226 + Charlie8 DNA MER1_type 46 189 -2228 2211 124 3 3 chr2 158896528 158896835 -94359748 + AluSg SINE Alu 1 307 -3 236 295 53 11 chr2 158896870 158896965 -94359618 - MIR SINE MIR -68 140 42 209 321 18 0 chr2 158897756 158897868 -94358715 + (TA)n Simple_repeat Simple_repeat 1 114 0 440 235 113 52 chr2 158897926 158898041 -94358542 + FLAM_A SINE Alu 2 123 -10 1003 234 23 9 chr2 158898123 158898341 -94358242 + MIR SINE MIR 4 224 -38 295 262 0 105 chr2 158899098 158899270 -94357313 - L1ME2 LINE L1 -107 6126 5973 1050 190 24 4 chr2 158899274 158899527 -94357056 - L1ME2 LINE L1 -746 5469 5212 529 282 19 33 chr2 158899532 158899742 -94356841 - MLT1G1 LTR MaLR -389 206 3 1316 242 31 56 chr2 158899755 158900359 -94356224 - L1ME2 LINE L1 -2742 3473 2885 4430 205 37 15 chr2 158900363 158901875 -94354708 - L1MB5 LINE L1 -8 6166 4689 1697 140 79 11 chr2 158901875 158902154 -94354429 - AluSg SINE Alu -12 298 1 4430 205 37 15 chr2 158902154 158902270 -94354313 - L1MB5 LINE L1 -1485 4689 4577 1605 191 85 15 chr2 158902270 158902610 -94353973 - MLT1A1 LTR MaLR 0 365 2 4430 205 37 15 chr2 158902610 158902865 -94353718 - L1MB5 LINE L1 -1597 4577 3952 2009 151 3 0 chr2 158902884 158903182 -94353401 - AluJb SINE Alu -13 299 1 1736 253 38 24 chr2 158903184 158903913 -94352670 - L1ME2 LINE L1 -3328 2887 2183 1214 290 120 59 chr2 158903923 158904190 -94352393 - L1ME2 LINE L1 -4293 2103 1854 2043 158 0 0 chr2 158904190 158904501 -94352082 + AluSx SINE Alu 1 311 -1 1214 290 120 59 chr2 158904501 158904702 -94351881 - L1ME2 LINE L1 -4542 1854 1667 246 163 0 0 chr2 158904702 158904745 -94351838 - Alu SINE Alu -15 287 245 1214 290 120 59 chr2 158904745 158905085 -94351498 - L1ME2 LINE L1 -4729 1667 1349 2275 95 7 0 chr2 158905085 158905381 -94351202 - AluSp SINE Alu -15 298 1 1214 290 120 59 chr2 158905381 158906457 -94350126 - L1ME2 LINE L1 -5047 1349 57 25 0 0 0 chr2 158906467 158906492 -94350091 + AT_rich Low_complexity Low_complexity 1 25 0 965 125 23 69 chr2 158906550 158906766 -94349817 - L1MD3 LINE L1 0 7995 7790 4333 58 36 0 chr2 158906768 158907356 -94349227 + L1PA7 LINE L1 5526 6134 -20 2302 71 3 7 chr2 158907369 158907665 -94348918 + AluY SINE Alu 1 295 -16 317 167 107 0 chr2 158907666 158907750 -94348833 - L1MC3 LINE L1 -194 7591 7499 26 0 0 0 chr2 158907822 158907848 -94348735 + AT_rich Low_complexity Low_complexity 1 26 0 5817 104 12 5 chr2 158907855 158908777 -94347806 - L1PB3 LINE L1 -1 6153 5227 317 299 21 49 chr2 158909187 158909331 -94347252 + MLT1K LTR MaLR 200 339 -249 9786 183 32 22 chr2 158909604 158912168 -94344415 - L1M2 LINE L1 -743 5403 2923 1085 257 79 83 chr2 158912188 158912733 -94343850 + MER45C DNA AcHobo 54 596 -357 325 137 0 0 chr2 158912759 158912810 -94343773 + MER45C DNA AcHobo 901 951 -2 21 36 0 0 chr2 158913065 158913093 -94343490 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr2 158913107 158913132 -94343451 + AT_rich Low_complexity Low_complexity 1 25 0 620 276 29 58 chr2 158913400 158913793 -94342790 + L1M2 LINE L1 5340 5715 -576 721 162 0 0 chr2 158913954 158914071 -94342512 - FLAM_C SINE Alu -25 118 2 310 243 86 0 chr2 158914487 158914557 -94342026 - MIR SINE MIR -158 104 29 330 283 23 68 chr2 158914813 158914878 -94341705 - MER5B DNA MER1_type 0 178 112 1727 169 10 19 chr2 158914878 158915186 -94341397 + AluJo SINE Alu 1 305 -7 330 283 23 68 chr2 158915186 158915297 -94341286 - MER5B DNA MER1_type -66 112 10 947 179 27 0 chr2 158915379 158915563 -94341020 - MER5A DNA MER1_type 0 189 1 1727 169 61 6 chr2 158916415 158916759 -94339824 - L1PB3 LINE L1 -2 6868 6506 292 125 0 0 chr2 158916759 158916807 -94339776 + L1P LINE L1 4889 4936 -1210 * 9109 191 10 20 chr2 158916805 158918436 -94338147 - L1PB3 LINE L1 -1230 5632 4027 1583 146 9 117 chr2 158918436 158918786 -94337797 - AluSx SINE Alu 0 312 1 9109 191 10 20 chr2 158918786 158919329 -94337254 - L1PB3 LINE L1 -2835 4027 3480 210 241 0 35 chr2 158919949 158920007 -94336576 + CT-rich Low_complexity Low_complexity 1 56 0 3640 270 24 44 chr2 158920016 158921792 -94334791 - L1PB3 LINE L1 -5219 1644 37 1337 256 86 0 chr2 158921907 158922314 -94334269 + L1MEc LINE L1 74 515 -5881 5590 155 7 25 chr2 158922644 158924692 -94331891 - L1PA13 LINE L1 -7 6156 4149 245 366 55 25 chr2 158924748 158924950 -94331633 + MIR SINE MIR 1 208 -54 1411 196 95 7 chr2 158925410 158925843 -94330740 - Charlie4a DNA MER1_type -8 500 30 1581 213 0 23 chr2 158925864 158926165 -94330418 - AluJo SINE Alu -12 300 7 379 252 40 40 chr2 158926811 158926962 -94329621 + MER112 DNA MER1_type 105 255 -5 255 59 39 20 chr2 158927120 158927171 -94329412 + (TTTG)n Simple_repeat Simple_repeat 2 53 0 1972 143 0 0 chr2 158927173 158927453 -94329130 - AluSx SINE Alu -32 280 1 2073 114 0 7 chr2 158929142 158929454 -94327129 + AluSp SINE Alu 1 313 0 484 315 122 3 chr2 158930247 158930568 -94326015 - LTR16A LTR ERVL 0 450 92 209 293 17 17 chr2 158930618 158930676 -94325907 - MIR SINE MIR -122 86 29 596 281 12 69 chr2 158930690 158930936 -94325647 - L2 LINE L2 -1 3312 3081 1372 133 5 0 chr2 158930984 158931211 -94325372 + AluJo SINE Alu 86 313 0 446 307 40 0 chr2 158931213 158931363 -94325220 - L2 LINE L2 -252 3061 2906 312 245 72 14 chr2 158931424 158931562 -94325021 + MER113 DNA MER1_type? 1 146 -375 1908 148 19 52 chr2 158931562 158931926 -94324657 - MER89 LTR ERV1 0 559 208 23 33 0 0 chr2 158932009 158932039 -94324544 + AT_rich Low_complexity Low_complexity 1 30 0 882 182 13 0 chr2 158932042 158932196 -94324387 + AluSg/x SINE Alu 132 287 -23 678 121 13 141 chr2 158932196 158932345 -94324238 - AluJo/FLAM SINE Alu -172 130 1 3112 104 0 7 chr2 158932409 158932859 -94323724 - L1PA13 LINE L1 -11 6152 5706 712 187 81 30 chr2 158932859 158933057 -94323526 - MER89 LTR ERV1 -351 208 1 230 106 21 0 chr2 158933143 158933190 -94323393 + (CA)n Simple_repeat Simple_repeat 1 48 0 262 381 25 8 chr2 158933813 158933931 -94322652 + L2 LINE L2 3136 3255 -17 1219 223 13 49 chr2 158935706 158936092 -94320491 - MLT2C1 LTR ERVL 0 397 26 327 326 35 85 chr2 158936464 158936722 -94319861 + MIR SINE MIR 2 246 -16 225 0 0 0 chr2 158936800 158936825 -94319758 + (A)n Simple_repeat Simple_repeat 1 25 0 272 279 148 33 chr2 158938051 158938173 -94318410 - L2 LINE L2 0 3272 3137 325 285 163 29 chr2 158938254 158938426 -94318157 + MIR SINE MIR 37 231 -31 507 186 27 137 chr2 158939974 158940157 -94316426 - LTR33A LTR ERVL -355 168 6 1812 87 0 0 chr2 158940548 158940778 -94315805 + AluSg/x SINE Alu 82 311 -1 680 313 99 10 chr2 158940951 158941264 -94315319 - L3 LINE CR1 -103 1474 1134 211 335 71 85 chr2 158941314 158941526 -94315057 + L2 LINE L2 3017 3225 -47 2215 102 0 0 chr2 158941734 158942018 -94314565 + AluSx SINE Alu 27 310 -2 233 320 93 40 chr2 158942143 158942293 -94314290 + MIR SINE MIR 89 246 -16 706 158 116 37 chr2 158942496 158942564 -94314019 - MER3 DNA MER1_type -4 205 144 724 207 0 0 chr2 158942564 158942685 -94313898 + FLAM_A SINE Alu 1 121 -12 706 158 116 37 chr2 158942685 158942806 -94313777 - MER3 DNA MER1_type -65 144 1 310 307 97 0 chr2 158942862 158942976 -94313607 - L3 LINE CR1 -545 1032 908 739 191 74 48 chr2 158943027 158943216 -94313367 - MER58A DNA MER1_type 0 224 31 1728 180 83 6 chr2 158943228 158943567 -94313016 - MLT1A1 LTR MaLR 0 365 1 519 260 183 6 chr2 158943806 158943975 -94312608 - MIR SINE MIR -21 241 43 1364 303 105 56 chr2 158944248 158945536 -94311047 + L2 LINE L2 1912 3267 -5 186 43 0 0 chr2 158948364 158948387 -94308196 + (CA)n Simple_repeat Simple_repeat 2 24 0 313 230 124 9 chr2 158948406 158948519 -94308064 + MIR SINE MIR 116 241 -21 1111 160 9 22 chr2 158948668 158948899 -94307684 + L1MA9 LINE L1 6085 6312 0 2123 168 68 0 chr2 158949601 158950000 -94306583 - MSTB LTR MaLR 0 426 1 181 367 38 0 chr2 158950090 158950169 -94306414 + L2 LINE L2 328 409 -2905 2148 207 19 58 chr2 158950246 158950782 -94305801 + LTR40a LTR ERVL 1 515 -4 2264 249 81 45 chr2 158950790 158950858 -94305725 - MER69B DNA AcHobo -1489 1037 973 7450 141 26 17 chr2 158950858 158952145 -94304438 - HSMAR2 DNA Mariner 0 1302 4 2264 249 81 45 chr2 158952145 158953038 -94303545 - MER69B DNA AcHobo -1553 973 41 421 173 0 60 chr2 158953732 158953865 -94302718 - L1MA4 LINE L1 0 6300 6176 432 193 0 127 chr2 158953887 158954068 -94302515 - L1MA4 LINE L1 -114 6186 6029 2411 81 0 0 chr2 158954070 158954379 -94302204 - AluY SINE Alu -2 309 1 316 313 156 6 chr2 158954472 158954651 -94301932 - MIR SINE MIR -13 249 44 195 122 61 0 chr2 158954971 158955020 -94301563 + CT-rich Low_complexity Low_complexity 2 53 0 413 292 88 6 chr2 158955409 158955580 -94301003 + MIR SINE MIR 22 206 -56 1244 27 0 0 chr2 158955593 158955739 -94300844 + L1PA3 LINE L1 6005 6150 -5 26 0 0 0 chr2 158955740 158955766 -94300817 + AT_rich Low_complexity Low_complexity 1 26 0 206 327 64 6 chr2 158957138 158957294 -94299289 + L2 LINE L2 2689 2853 -461 362 298 51 44 chr2 158957753 158957911 -94298672 - L2 LINE L2 -4 3309 3151 529 356 142 3 chr2 158958040 158958363 -94298220 - L2 LINE L2 -345 2969 2602 297 51 0 0 chr2 158958386 158958425 -94298158 + (ATG)n Simple_repeat Simple_repeat 1 39 0 29 0 0 0 chr2 158958457 158958486 -94298097 + AT_rich Low_complexity Low_complexity 1 29 0 2948 28 3 3 chr2 158958486 158958840 -94297743 - L1PA4 LINE L1 -3 6152 5799 28 0 0 0 chr2 158959377 158959405 -94297178 + AT_rich Low_complexity Low_complexity 1 28 0 1952 157 0 3 chr2 158960110 158960416 -94296167 - AluJo SINE Alu -2 310 6 1291 253 127 32 chr2 158960486 158961083 -94295500 + L1ME2 LINE L1 5510 6163 -1 2273 92 0 20 chr2 158961094 158961399 -94295184 + AluSc SINE Alu 1 299 -10 181 318 76 0 chr2 158961991 158962057 -94294526 + L2 LINE L2 1134 1204 -2110 2297 98 3 0 chr2 158962260 158962557 -94294026 - AluSq SINE Alu -15 298 1 669 271 53 44 chr2 158962609 158962834 -94293749 + MIR SINE MIR 26 252 -10 25 51 0 0 chr2 158963622 158963661 -94292922 + AT_rich Low_complexity Low_complexity 1 39 0 1529 207 3 10 chr2 158963707 158964012 -94292571 - AluSx SINE Alu -7 305 3 30052 107 12 60 chr2 158964444 158970916 -94285667 + L1PA7 LINE L1 2 6152 -2 255 300 54 31 chr2 158971512 158971642 -94284941 - L2 LINE L2 -175 3138 3006 398 176 0 0 chr2 158972378 158972446 -94284137 - MER45B DNA AcHobo -413 627 560 273 152 206 33 chr2 158972602 158972694 -94283889 + MLT1F LTR MaLR 334 441 -101 253 216 0 0 chr2 158973022 158973073 -94283510 - Charlie8 DNA MER1_type 0 2417 2367 2008 174 14 38 chr2 158973128 158973552 -94283031 + L1M3 LINE L1 5202 5614 -569 1791 171 0 23 chr2 158973552 158973856 -94282727 + AluJo SINE Alu 3 299 -13 2008 174 14 38 chr2 158973856 158973931 -94282652 + L1M3 LINE L1 5614 5689 -494 1848 186 20 0 chr2 158973933 158974283 -94282300 - MLT1A1 LTR MaLR -8 357 1 221 125 0 42 chr2 158974878 158974926 -94281657 + (TTCC)n Simple_repeat Simple_repeat 3 48 0 8516 229 25 30 chr2 158976735 158977619 -94278964 - L1MC1 LINE L1 -18 6595 5709 1640 150 8 8 chr2 158977619 158977872 -94278711 - AluSq SINE Alu -20 293 41 8516 229 25 30 chr2 158977872 158978640 -94277943 - L1MC1 LINE L1 -904 5709 4939 2288 160 57 5 chr2 158978640 158979047 -94277536 + MSTA LTR MaLR 1 428 0 8516 229 25 30 chr2 158979047 158980528 -94276055 - L1MC1 LINE L1 -1674 4939 3453 5347 119 26 32 chr2 158980528 158980846 -94275737 + L1PA15 LINE L1 4384 4702 -1463 186 71 0 0 chr2 158980846 158980874 -94275709 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 5347 119 26 32 chr2 158980874 158981294 -94275289 + L1PA15 LINE L1 4702 5123 -1042 2122 135 0 3 chr2 158981294 158981590 -94274993 - AluSg SINE Alu -11 299 5 5347 119 26 32 chr2 158981590 158982636 -94273947 + L1PA15 LINE L1 5123 6152 -13 8516 229 25 30 chr2 158982636 158983652 -94272931 - L1MC1 LINE L1 -3160 3453 2463 363 221 83 2 chr2 158983652 158983741 -94272842 - AluJ/FLAM SINE Alu -217 85 3 2129 137 79 51 chr2 158983742 158984832 -94271751 - L1MC1 LINE L1 -3971 2455 1397 261 57 0 0 chr2 158984832 158984867 -94271716 + (CA)n Simple_repeat Simple_repeat 2 36 0 2129 137 79 51 chr2 158984867 158986089 -94270494 - L1MC1 LINE L1 -5029 1397 32 1376 199 5 93 chr2 158986216 158986583 -94270000 + MLT1A1 LTR MaLR 31 365 0 5861 203 19 59 chr2 158986587 158988259 -94268324 + MLT1A1-int LTR MaLR 5 1729 -6 1256 142 42 61 chr2 158988264 158988568 -94268015 + MLT1A1 LTR MaLR 1 399 -27 234 62 0 0 chr2 158989453 158989485 -94267098 + (TCCCC)n Simple_repeat Simple_repeat 2 33 0 189 214 0 0 chr2 158989480 158989522 -94267061 + CT-rich Low_complexity Low_complexity 2 43 0 * 1929 145 86 6 chr2 158990582 158990920 -94265663 - MLT1A1 LTR MaLR 0 365 1 313 307 0 0 chr2 158991951 158992039 -94264544 + CT-rich Low_complexity Low_complexity 1 88 0 412 216 18 29 chr2 158992273 158992444 -94264139 + CT-rich Low_complexity Low_complexity 1 169 0 214 150 17 17 chr2 158992974 158993034 -94263549 + (CCTTG)n Simple_repeat Simple_repeat 2 61 0 209 129 0 57 chr2 158993021 158993091 -94263492 + (TTCC)n Simple_repeat Simple_repeat 1 66 0 * 511 78 22 11 chr2 158993110 158993200 -94263383 + (TTCCC)n Simple_repeat Simple_repeat 2 92 0 1631 153 3 58 chr2 158993205 158993500 -94263083 - AluJo SINE Alu -33 279 1 795 274 89 24 chr2 158993513 158993919 -94262664 + MLT1K LTR MaLR 69 564 -24 1005 86 0 0 chr2 158995167 158995330 -94261253 + (TA)n Simple_repeat Simple_repeat 1 163 0 1142 264 97 17 chr2 158995416 158995776 -94260807 + MLT1I LTR MaLR 12 400 -9 798 225 225 21 chr2 158995778 158996364 -94260219 + LTR50 LTR ERVL 1 795 0 34 42 0 0 chr2 158996371 158996419 -94260164 + AT_rich Low_complexity Low_complexity 1 48 0 758 155 0 31 chr2 158996423 158996552 -94260031 - FLAM_C SINE Alu -16 127 3 24 0 0 0 chr2 158996786 158996810 -94259773 + AT_rich Low_complexity Low_complexity 1 24 0 800 313 43 9 chr2 158997699 158997932 -94258651 - MIR SINE MIR -6 256 16 206 246 0 35 chr2 158998125 158998182 -94258401 - L2 LINE L2 0 3313 3259 352 322 155 65 chr2 158998290 158998749 -94257834 - L2 LINE L2 -532 2782 2283 338 106 67 29 chr2 158998757 158998861 -94257722 + (TA)n Simple_repeat Simple_repeat 2 109 0 457 116 46 35 chr2 158998861 158999034 -94257549 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 439 99 106 19 chr2 158999037 158999198 -94257385 + (TA)n Simple_repeat Simple_repeat 2 176 0 348 161 11 50 chr2 158999198 158999378 -94257205 + (TTATA)n Simple_repeat Simple_repeat 5 177 0 278 75 106 21 chr2 158999383 158999477 -94257106 + (TA)n Simple_repeat Simple_repeat 2 103 0 282 143 58 63 chr2 158999480 158999830 -94256753 + (CATATA)n Simple_repeat Simple_repeat 1 348 0 238 171 70 39 chr2 158999802 158999931 -94256652 + (TA)n Simple_repeat Simple_repeat 2 134 0 * 256 203 32 32 chr2 159000118 159000241 -94256342 + (TA)n Simple_repeat Simple_repeat 2 124 0 456 151 0 94 chr2 159000887 159000993 -94255590 - L1PA10 LINE L1 0 6168 6073 2131 112 0 0 chr2 159001381 159001668 -94254915 + AluSg1 SINE Alu 1 287 -22 2280 245 67 36 chr2 159002239 159002982 -94253601 - L1ME3A LINE L1 0 6965 6200 4625 251 84 61 chr2 159003005 159003565 -94253018 - L1ME3A LINE L1 -736 6223 5678 1540 209 0 4 chr2 159003565 159003843 -94252740 + AluJo SINE Alu 5 281 -31 233 29 0 29 chr2 159003843 159003878 -94252705 + (CAAAC)n Simple_repeat Simple_repeat 1 34 0 4625 251 84 61 chr2 159003878 159006486 -94250097 - L1ME3A LINE L1 -1280 5679 2995 6748 90 26 12 chr2 159006486 159007491 -94249092 - L1MA1 LINE L1 0 6302 5284 5514 150 30 14 chr2 159007500 159008474 -94248109 - L1MA1 LINE L1 -1062 5084 4090 2351 135 6 8 chr2 159008474 159008838 -94247745 + THE1B LTR MaLR 2 364 0 5514 150 30 14 chr2 159008838 159008940 -94247643 - L1MA1 LINE L1 -2056 4090 3991 363 243 46 112 chr2 159008946 159009098 -94247485 - L1ME3A LINE L1 -4099 3023 2882 600 137 0 0 chr2 159009099 159009194 -94247389 - AluSg/x SINE Alu -1 311 217 5862 112 12 21 chr2 159009196 159010411 -94246172 + L1PA14 LINE L1 4955 6161 0 592 240 22 48 chr2 159010422 159010651 -94245932 - L1MC4 LINE L1 0 8042 7820 520 310 108 58 chr2 159010665 159011100 -94245483 - L1ME3A LINE L1 -4620 2321 1865 302 113 0 19 chr2 159011100 159011153 -94245430 + (TTCC)n Simple_repeat Simple_repeat 1 52 0 352 323 60 23 chr2 159011153 159011184 -94245399 - L1ME3A LINE L1 -4681 2191 2163 2104 81 0 0 chr2 159011184 159011457 -94245126 - AluY SINE Alu -38 273 1 352 323 60 23 chr2 159011457 159011685 -94244898 - L1ME3A LINE L1 -4709 2163 1690 235 292 49 60 chr2 159011753 159011938 -94244645 - L1ME3A LINE L1 -5073 1350 1168 244 324 104 17 chr2 159013500 159013673 -94242910 - MIR SINE MIR -7 255 68 2075 149 13 0 chr2 159015102 159015410 -94241173 + AluSx SINE Alu 1 312 0 309 248 41 83 chr2 159015527 159015648 -94240935 - L2 LINE L2 -10 3303 3188 2248 167 54 10 chr2 159015986 159016394 -94240189 + MSTB LTR MaLR 1 426 0 180 0 0 0 chr2 159018480 159018500 -94238083 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 2362 113 0 26 chr2 159018634 159018980 -94237603 - MER1B DNA MER1_type 0 337 1 213 39 0 0 chr2 159019427 159019453 -94237130 + (CA)n Simple_repeat Simple_repeat 2 27 0 1937 168 27 3 chr2 159019476 159019804 -94236779 + MER2 DNA MER2_type 1 336 -9 708 304 98 35 chr2 159019843 159020189 -94236394 - MLT1K LTR MaLR -86 502 135 295 345 54 14 chr2 159020949 159021097 -94235486 + L2 LINE L2 3117 3270 -2 219 114 0 0 chr2 159021461 159021496 -94235087 + (A)n Simple_repeat Simple_repeat 1 35 0 1931 125 14 7 chr2 159021801 159022088 -94234495 - AluSq SINE Alu -19 294 6 22 0 0 0 chr2 159022937 159022959 -94233624 + AT_rich Low_complexity Low_complexity 1 22 0 1644 145 112 21 chr2 159023516 159023854 -94232729 - THE1C LTR MaLR 0 375 7 995 302 32 30 chr2 159074227 159075126 -94181457 - MER51A-int LTR ERV1 -120 8186 7382 333 161 0 0 chr2 159075999 159076055 -94180528 - MER51A-int LTR ERV1 -274 7542 7487 2056 305 50 49 chr2 159076434 159079310 -94177273 - MER51A-int LTR ERV1 -1155 3908 2897 496 281 24 32 chr2 159080834 159081128 -94175455 - MER51A-int LTR ERV1 -5050 1813 1429 679 193 6 50 chr2 159081205 159081386 -94175197 - MER51A-int LTR ERV1 -7018 798 626 650 124 54 0 chr2 159081383 159081512 -94175071 - MER51A-int LTR ERV1 -2416 3530 3395 * 502 84 0 14 chr2 159081516 159081587 -94174996 + AluSc SINE Alu 62 131 -178 899 90 0 0 chr2 159081688 159081799 -94174784 - AluYb8 SINE Alu -207 111 1 279 129 0 65 chr2 159081801 159081863 -94174720 - MER51A-int LTR ERV1 -3810 4006 3949 2305 164 50 71 chr2 159081957 159082494 -94174089 - MER51A-int LTR ERV1 -7289 527 2 1536 135 12 7 chr2 159082495 159082961 -94173622 - MER51A LTR ERV1 0 590 1 536 246 104 48 chr2 159083738 159084133 -94172450 + HAL1b LINE L1 533 949 -399 5650 200 39 21 chr2 159084655 159086079 -94170504 + Charlie1a DNA MER1_type 7 1455 0 431 309 92 36 chr2 159086836 159087140 -94169443 + L1M4 LINE L1 2979 3299 -2847 2433 100 3 0 chr2 159087179 159087489 -94169094 - AluSq SINE Alu -2 311 1 264 191 65 77 chr2 159087490 159087658 -94168925 + L1MC5 LINE L1 5318 5483 -2325 24 77 0 0 chr2 159087717 159087769 -94168814 + AT_rich Low_complexity Low_complexity 1 52 0 270 174 0 0 chr2 159088275 159088329 -94168254 + L1MC5 LINE L1 5606 5653 -468 572 114 114 0 chr2 159088520 159088634 -94167949 + L1MA4 LINE L1 6165 6291 -9 21 0 0 0 chr2 159089949 159089970 -94166613 + AT_rich Low_complexity Low_complexity 1 21 0 234 303 77 58 chr2 159090402 159090557 -94166026 + L2 LINE L2 2612 2769 -545 413 170 96 0 chr2 159091655 159091749 -94164834 - LTR24B LTR ERV1 -6 570 468 869 191 97 47 chr2 159091771 159092069 -94164514 - LTR56 LTR ERV1 -121 324 12 216 325 155 20 chr2 159092078 159092278 -94164305 + L2 LINE L2 2508 2734 -580 1887 215 63 18 chr2 159092829 159093433 -94163150 - MER69 DNA AcHobo -366 2160 1530 960 270 60 19 chr2 159093434 159093701 -94162882 - MER69 DNA AcHobo -940 286 9 428 252 14 17 chr2 159093726 159093855 -94162728 + MIR3 SINE MIR 80 172 -36 225 311 61 22 chr2 159094073 159094253 -94162330 + L1MC5 LINE L1 5777 5963 -1845 295 269 82 37 chr2 159094386 159094654 -94161929 + MER69 DNA AcHobo 1534 1813 -713 1443 213 97 135 chr2 159094808 159095865 -94160718 + L1MC5 LINE L1 6449 7474 -487 331 234 61 86 chr2 159095991 159096188 -94160395 + L1MC5 LINE L1 7609 7800 -161 419 244 8 32 chr2 159096648 159096731 -94159852 - MER94 DNA DNA -4 130 49 1068 177 130 72 chr2 159096731 159097076 -94159507 - MLT1A1 LTR MaLR 0 365 1 419 244 8 32 chr2 159097076 159097115 -94159468 - MER94 DNA DNA -85 49 11 222 118 0 0 chr2 159097507 159097541 -94159042 + (TAA)n Simple_repeat Simple_repeat 1 34 0 827 310 51 36 chr2 159098003 159098532 -94158051 - L1MEc LINE L1 -5859 537 1 580 245 19 20 chr2 159099008 159099223 -94157360 + MER58 DNA MER1_type 3 2420 0 219 263 0 18 chr2 159099257 159099314 -94157269 - L2 LINE L2 -3 3310 3255 879 310 95 12 chr2 159101032 159101432 -94155151 - MLT1K LTR MaLR -19 569 137 844 309 91 24 chr2 159103800 159104260 -94152323 + MER20B DNA MER1_type 38 528 -255 1112 183 139 26 chr2 159104268 159104541 -94152042 - MER2 DNA MER2_type -2 343 40 491 0 17 0 chr2 159104545 159104604 -94151979 + (TG)n Simple_repeat Simple_repeat 1 60 0 295 220 70 90 chr2 159104609 159104809 -94151774 + MER20B DNA MER1_type 533 728 -55 2258 125 0 0 chr2 159104968 159105273 -94151310 + AluSg SINE Alu 1 305 -5 916 199 44 151 chr2 159105752 159106184 -94150399 - MLT1B LTR MaLR 0 390 5 1983 191 46 2 chr2 159106237 159106714 -94149869 + L1 LINE L1 3092 3589 -2557 566 246 8 0 chr2 159106714 159106844 -94149739 + MLT1B LTR MaLR 260 390 0 712 203 21 0 chr2 159106866 159107009 -94149574 + L1 LINE L1 3614 3759 -2387 * 40881 34 3 2 chr2 159107004 159112728 -94143855 + L1PA3 LINE L1 425 6152 -3 559 219 0 0 chr2 159112758 159112886 -94143697 + L1 LINE L1 3741 3868 -2278 1637 141 6 63 chr2 159112911 159113349 -94143234 + L1MA4 LINE L1 5417 5787 -513 1926 76 23 0 chr2 159113349 159113608 -94142975 + L1PA11 LINE L1 5904 6171 -3 2165 192 47 4 chr2 159113608 159114108 -94142475 + L1MA4 LINE L1 5764 6296 -4 21 36 0 0 chr2 159114749 159114777 -94141806 + AT_rich Low_complexity Low_complexity 1 28 0 514 327 114 16 chr2 159117140 159117525 -94139058 - L1ME3A LINE L1 -231 5939 5517 331 231 84 49 chr2 159117562 159117726 -94138857 - L1ME3A LINE L1 -749 5397 5258 211 91 80 11 chr2 159117742 159117830 -94138753 + (TA)n Simple_repeat Simple_repeat 1 94 0 936 306 48 22 chr2 159117844 159118485 -94138098 - L1ME3A LINE L1 -874 5272 4615 309 259 43 9 chr2 159118503 159118619 -94137964 - L1ME3A LINE L1 -1629 4517 4398 42856 32 21 1 chr2 159118632 159124662 -94131921 - L1HS LINE L1 0 6155 3 1572 155 17 57 chr2 159124707 159124849 -94131734 + AluJo SINE Alu 6 131 -181 2353 97 0 6 chr2 159124849 159125160 -94131423 + AluSc SINE Alu 1 309 0 1572 155 17 57 chr2 159125160 159125314 -94131269 + AluJo SINE Alu 131 290 -22 1599 174 27 27 chr2 159125949 159126248 -94130335 - AluJo SINE Alu -13 299 1 640 313 68 27 chr2 159126295 159126712 -94129871 - L1MEc LINE L1 -711 1779 1286 436 319 73 20 chr2 159126734 159127570 -94129013 - L1MEc LINE L1 -4943 1176 284 2061 129 24 54 chr2 159127687 159127882 -94128701 - THE1B LTR MaLR 0 364 184 2234 112 0 7 chr2 159127882 159128185 -94128398 - AluSg SINE Alu -9 301 1 2061 129 24 54 chr2 159128185 159128361 -94128222 - THE1B LTR MaLR -180 184 4 11513 105 3 1 chr2 159128361 159129922 -94126661 - THE1B-int LTR MaLR -15 1565 1 2170 136 45 17 chr2 159129922 159130274 -94126309 - THE1B LTR MaLR 0 364 3 293 339 31 8 chr2 159131027 159131157 -94125426 - LTR16C LTR ERVL -2 489 357 1552 241 7 3 chr2 159132095 159132398 -94124185 + Tigger5 DNA MER2_type 1 304 -2019 1228 132 39 5 chr2 159132406 159132611 -94123972 + Tigger5 DNA MER2_type 2112 2323 0 699 87 0 0 chr2 159134071 159134163 -94122420 + AluY SINE Alu 203 294 -17 493 308 11 16 chr2 159134361 159134546 -94122037 + MER5A DNA MER1_type 2 185 -4 385 339 108 5 chr2 159135031 159135217 -94121366 - MIR SINE MIR -6 256 52 241 300 67 11 chr2 159135228 159135318 -94121265 + L2 LINE L2 1236 1330 -1984 464 284 165 31 chr2 159136343 159136818 -94119765 + L2 LINE L2 1488 3309 -4 6183 148 30 13 chr2 159136926 159138089 -94118494 - L1MC1 LINE L1 0 6333 5157 229 224 82 0 chr2 159138534 159138619 -94117964 - MLT1K LTR MaLR 0 588 497 229 346 67 10 chr2 159138669 159138773 -94117810 - MLT1K LTR MaLR -190 398 289 21 0 0 0 chr2 159139143 159139164 -94117419 + AT_rich Low_complexity Low_complexity 1 21 0 1720 159 7 28 chr2 159139274 159139564 -94117019 - AluJo SINE Alu -18 294 11 22 0 0 0 chr2 159139596 159139618 -94116965 + AT_rich Low_complexity Low_complexity 1 22 0 339 307 87 7 chr2 159140045 159140195 -94116388 + MIR SINE MIR 95 256 -6 1260 247 52 18 chr2 159140619 159141000 -94115583 - MSTD LTR MaLR -2 394 1 3019 187 98 32 chr2 159141553 159141638 -94114945 + L1MB3 LINE L1 5306 5384 -799 1632 188 0 41 chr2 159141638 159141957 -94114626 + AluJo SINE Alu 1 306 -6 3019 187 98 32 chr2 159141957 159142691 -94113892 + L1MB3 LINE L1 5384 6179 -4 3332 261 138 25 chr2 159143257 159144497 -94112086 + L1M1 LINE L1 5 1384 -5825 * 7790 183 45 26 chr2 159144494 159145588 -94110995 + L1M1 LINE L1 4659 5812 -1553 180 0 0 0 chr2 159145588 159145608 -94110975 + (CAA)n Simple_repeat Simple_repeat 2 21 0 7790 183 45 26 chr2 159145608 159146541 -94110042 + L1M1 LINE L1 5812 6726 -639 228 291 87 24 chr2 159146626 159146753 -94109830 + L2 LINE L2 2919 3053 -219 2002 181 11 162 chr2 159146846 159147464 -94109119 - MER70B LTR ERVL -53 525 1 4278 205 23 38 chr2 159147683 159147762 -94108821 - L1MB2 LINE L1 0 6171 6092 2176 108 7 0 chr2 159147762 159148057 -94108526 - AluSp SINE Alu -16 297 1 4278 205 23 38 chr2 159148057 159149954 -94106629 - L1MB2 LINE L1 -79 6092 4232 335 220 17 0 chr2 159149958 159150017 -94106566 - MER2 DNA MER2_type 0 345 286 * 488 254 15 34 chr2 159150014 159150144 -94106439 - MER2 DNA MER2_type -102 137 1 3793 184 75 43 chr2 159150144 159150886 -94105697 - L1MB2 LINE L1 -1917 4229 3447 234 0 0 0 chr2 159150886 159150912 -94105671 + (TTA)n Simple_repeat Simple_repeat 2 27 0 3793 184 75 43 chr2 159150912 159151149 -94105434 - L1MB2 LINE L1 -2699 3447 3219 1008 231 91 65 chr2 159152801 159152970 -94103613 + MSTD LTR MaLR 1 164 -232 2110 122 3 25 chr2 159152970 159153290 -94103293 + AluSq SINE Alu 1 313 0 1008 231 91 65 chr2 159153290 159153506 -94103077 + MSTD LTR MaLR 164 396 0 26 0 0 0 chr2 159153898 159153924 -94102659 + AT_rich Low_complexity Low_complexity 1 26 0 186 286 0 0 chr2 159154057 159154106 -94102477 - L2 LINE L2 -36 3236 3188 224 189 0 0 chr2 159154106 159154143 -94102440 + polypurine Low_complexity Low_complexity 3 39 0 361 364 31 52 chr2 159154250 159154568 -94102015 - L2 LINE L2 -254 3059 2748 6516 74 2 3 chr2 159154598 159155876 -94100707 - L1PA8A LINE L1 -18 6113 4836 333 250 39 109 chr2 159156301 159156457 -94100126 - L1MC4a LINE L1 -1961 5847 5703 264 316 287 7 chr2 159156732 159156868 -94099715 - MIR3 SINE MIR -15 193 20 27 29 0 0 chr2 159157495 159157529 -94099054 + AT_rich Low_complexity Low_complexity 1 34 0 186 43 0 0 chr2 159157573 159157596 -94098987 + (TATG)n Simple_repeat Simple_repeat 2 24 0 1170 235 130 14 chr2 159158214 159158714 -94097869 + MLT2F LTR ERVL 3 607 -56 297 0 0 0 chr2 159158748 159158781 -94097802 + (CA)n Simple_repeat Simple_repeat 2 34 0 2641 197 35 5 chr2 159159088 159159681 -94096902 + L1PA16 LINE L1 4747 5357 -789 2670 118 7 45 chr2 159159681 159160120 -94096463 + L1PA16 LINE L1 5734 6157 -9 22 88 0 0 chr2 159160120 159160177 -94096406 + AT_rich Low_complexity Low_complexity 1 57 0 1584 208 48 23 chr2 159160260 159160734 -94095849 - MER119 DNA MER1_type 0 583 1 734 358 66 44 chr2 159160867 159161615 -94094968 - L2 LINE L2 0 3272 2505 782 254 64 0 chr2 159161625 159161798 -94094785 - MER5A DNA MER1_type -5 184 1 292 363 123 16 chr2 159161866 159162175 -94094408 - L2 LINE L2 -1904 1410 1069 24 0 0 0 chr2 159162459 159162483 -94094100 + AT_rich Low_complexity Low_complexity 1 24 0 27 73 0 0 chr2 159162775 159162830 -94093753 + AT_rich Low_complexity Low_complexity 1 55 0 761 260 147 30 chr2 159163024 159163486 -94093097 + LTR33A LTR ERVL 6 521 -2 21 36 0 0 chr2 159164698 159164726 -94091857 + AT_rich Low_complexity Low_complexity 1 28 0 271 212 61 0 chr2 159165259 159165325 -94091258 + MER112 DNA MER1_type 4 73 -187 1755 195 32 3 chr2 159167590 159167929 -94088654 + Tigger1 DNA MER2_type 2 350 -2068 2363 183 11 4 chr2 159167931 159168415 -94088168 - L1MEd LINE L1 -3581 3267 2773 * 4686 149 20 111 chr2 159168402 159169015 -94087568 - L1PBa LINE L1 -5850 1013 543 2370 69 3 31 chr2 159169015 159169335 -94087248 + AluY SINE Alu 1 311 0 4686 149 20 111 chr2 159169335 159169825 -94086758 - L1PBa LINE L1 -6320 543 10 850 192 43 29 chr2 159169826 159170034 -94086549 + Tigger1 DNA MER2_type 2207 2417 -1 243 362 31 88 chr2 159170396 159170747 -94085836 + L2 LINE L2 2600 2930 -384 27 0 0 0 chr2 159170927 159170954 -94085629 + AT_rich Low_complexity Low_complexity 1 27 0 2045 198 39 2 chr2 159172041 159172456 -94084127 + MER63B DNA MER1_type 1 430 -6 415 221 33 72 chr2 159172634 159172815 -94083768 + MER104 DNA Tc2 7 180 0 460 274 51 89 chr2 159173775 159174146 -94082437 - L1ME LINE L1 -440 5681 5319 21 0 0 0 chr2 159174251 159174272 -94082311 + AT_rich Low_complexity Low_complexity 1 21 0 1586 221 44 3 chr2 159174349 159174688 -94081895 + MLT1A1 LTR MaLR 13 365 0 260 220 0 0 chr2 159174863 159174913 -94081670 - LTR16C LTR ERVL -2 489 440 1420 266 173 4 chr2 159174917 159175398 -94081185 - REP3 LTR ERV 0 562 1 687 327 52 26 chr2 159175399 159175748 -94080835 - LTR16C LTR ERVL -52 439 82 825 181 52 94 chr2 159176366 159176654 -94079929 + MLT1D LTR MaLR 1 276 -229 317 240 90 0 chr2 159176792 159176892 -94079691 - HAL1 LINE L1 -1313 1194 1086 585 284 124 47 chr2 159177555 159178070 -94078513 - L1MEd LINE L1 -5004 1834 1280 2011 132 3 7 chr2 159178316 159178611 -94077972 - AluSx SINE Alu -18 294 1 22 0 0 0 chr2 159179490 159179512 -94077071 + AT_rich Low_complexity Low_complexity 1 22 0 2721 160 29 11 chr2 159180995 159181515 -94075068 + L1MC2 LINE L1 5807 6335 -9 21 0 0 0 chr2 159181846 159181867 -94074716 + AT_rich Low_complexity Low_complexity 1 21 0 641 176 161 112 chr2 159182588 159182793 -94073790 + MER58C DNA MER1_type 1 215 0 240 244 73 37 chr2 159183881 159183963 -94072620 - MIR SINE MIR -21 241 157 29 84 0 0 chr2 159184154 159184225 -94072358 + AT_rich Low_complexity Low_complexity 1 71 0 3002 249 122 52 chr2 159184343 159185269 -94071314 - L1MC5 LINE L1 -62 7899 7040 912 239 159 7 chr2 159185269 159185570 -94071013 - MER7A DNA MER2_type 0 346 2 3002 249 122 52 chr2 159185570 159185617 -94070966 - L1MC5 LINE L1 -921 7040 6998 1447 217 25 0 chr2 159185617 159185898 -94070685 - AluJo SINE Alu -24 288 1 3002 249 122 52 chr2 159185898 159187139 -94069444 - L1MC5 LINE L1 -963 6998 5487 27 0 0 0 chr2 159187796 159187823 -94068760 + AT_rich Low_complexity Low_complexity 1 27 0 2225 105 3 0 chr2 159187823 159188117 -94068466 - AluSq SINE Alu -18 295 1 787 311 42 11 chr2 159188198 159188481 -94068102 - MER93a LTR ERV1 -3 399 108 393 248 0 10 chr2 159188565 159188666 -94067917 - MER93a LTR ERV1 -3 399 300 237 284 148 61 chr2 159188783 159189175 -94067408 - L1MC5 LINE L1 -1592 4554 4197 2114 123 27 0 chr2 159189175 159189476 -94067107 - AluSx SINE Alu -3 309 1 237 284 148 61 chr2 159189476 159189882 -94066701 - L1MC5 LINE L1 -1949 4197 3687 677 210 56 84 chr2 159189891 159190105 -94066478 - MER74A LTR ERVL -2 556 349 2093 182 41 10 chr2 159190125 159190543 -94066040 - MER95 LTR ERV 0 431 1 1481 191 20 20 chr2 159190551 159190845 -94065738 - MER74A LTR ERVL -264 294 1 411 273 76 62 chr2 159191049 159191324 -94065259 - L1MC5 LINE L1 -3011 3135 2857 260 301 77 31 chr2 159191404 159191793 -94064790 - L1MC5 LINE L1 -3405 2741 2335 21 0 0 0 chr2 159191870 159191891 -94064692 + AT_rich Low_complexity Low_complexity 1 21 0 6334 111 9 4 chr2 159192088 159193038 -94063545 - L1MA1 LINE L1 0 6302 5348 2525 140 12 0 chr2 159193038 159193437 -94063146 - L1PB1 LINE L1 -12 6855 6452 447 19 0 0 chr2 159193439 159193484 -94063099 + (TA)n Simple_repeat Simple_repeat 1 48 -6 423 0 0 0 chr2 159193484 159193531 -94063052 + (CA)n Simple_repeat Simple_repeat 2 48 0 447 19 0 0 chr2 159193531 159193539 -94063044 + (TA)n Simple_repeat Simple_repeat 47 54 0 203 270 15 22 chr2 159193545 159193682 -94062901 + (TAAA)n Simple_repeat Simple_repeat 1 136 0 207 0 0 0 chr2 159193686 159193709 -94062874 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1897 135 7 0 chr2 159193713 159193987 -94062596 - AluSg SINE Alu -32 278 3 13537 207 21 17 chr2 159193990 159195336 -94061247 - L1PB1 LINE L1 -415 6452 5114 2302 135 25 0 chr2 159195336 159195691 -94060892 + THE1B LTR MaLR 1 364 0 9994 116 45 6 chr2 159195691 159197212 -94059371 + THE1B-int LTR MaLR 1 1580 0 1963 137 77 0 chr2 159197212 159197549 -94059034 + THE1B LTR MaLR 1 363 -1 410 0 20 0 chr2 159197559 159197609 -94058974 + (TTTTA)n Simple_repeat Simple_repeat 2 52 0 13537 207 21 17 chr2 159197609 159200742 -94055841 - L1PB1 LINE L1 -1761 5106 1826 6595 176 63 11 chr2 159200846 159202109 -94054474 - L1PB1 LINE L1 -5534 1329 1 13821 177 29 20 chr2 159202130 159203675 -94052908 - L1 LINE L1 -837 6728 5197 2143 111 6 16 chr2 159203675 159203990 -94052593 - AluSx SINE Alu 0 312 1 13821 177 29 20 chr2 159203990 159204790 -94051793 - L1 LINE L1 -2368 5197 4405 7645 46 9 0 chr2 159204790 159206516 -94050067 + L1PA5 LINE L1 4442 6175 0 13821 177 29 20 chr2 159206516 159207847 -94048736 - L1 LINE L1 -3160 4405 3018 271 204 0 0 chr2 159207847 159207896 -94048687 - L1 LINE L1 -7505 60 12 1978 131 17 0 chr2 159208239 159208530 -94048053 + AluSx SINE Alu 1 296 -16 392 288 129 17 chr2 159208576 159208809 -94047774 - HAL1b LINE L1 -608 740 482 739 249 138 65 chr2 159208937 159209351 -94047232 - L1ME3A LINE L1 -194 5968 5525 189 296 70 0 chr2 159209351 159209422 -94047161 - MIR3 SINE MIR -13 195 120 864 126 63 0 chr2 159209447 159209590 -94046993 + AluSg/x SINE Alu 158 309 -3 1904 126 3 45 chr2 159211197 159211506 -94045077 + AluSx SINE Alu 1 296 -16 300 190 0 0 chr2 159212617 159212696 -94043887 + CT-rich Low_complexity Low_complexity 2 80 0 690 311 105 20 chr2 159213454 159213869 -94042714 + L2 LINE L2 2613 3062 -251 364 286 32 32 chr2 159214099 159214253 -94042330 + L2 LINE L2 3118 3271 -42 196 381 31 41 chr2 159214366 159214560 -94042023 + L2 LINE L2 3076 3267 -5 568 353 110 10 chr2 159214724 159215033 -94041550 + MER102b DNA MER1_type 2 341 0 1876 31 4 0 chr2 159215336 159215561 -94041022 - L1PA3 LINE L1 0 6155 5930 6441 21 9 0 chr2 159215579 159216342 -94040241 + L1P LINE L1 3746 4515 -1631 226 361 49 35 chr2 159217767 159217911 -94038672 - MER5A DNA MER1_type 0 189 44 * 274 329 21 71 chr2 159217808 159217948 -94038635 + MER5A DNA MER1_type 57 189 0 1581 136 0 5 chr2 159218407 159218628 -94037955 - AluSx SINE Alu -92 220 1 347 312 89 6 chr2 159220994 159221151 -94035432 + MIR3 SINE MIR 30 199 -9 214 333 103 51 chr2 159224202 159224358 -94032225 - MIR3 SINE MIR -22 186 23 845 275 46 8 chr2 159225309 159225549 -94031034 + MIR SINE MIR 1 249 -13 336 247 31 52 chr2 159226060 159226157 -94030426 + L2 LINE L2 3201 3295 -18 21 0 0 0 chr2 159226184 159226205 -94030378 + AT_rich Low_complexity Low_complexity 1 21 0 475 288 75 19 chr2 159226938 159227205 -94029378 + MARNA DNA Mariner 207 488 -98 247 185 64 134 chr2 159227134 159227241 -94029342 - MARNA DNA Mariner -419 167 73 * 2573 62 0 0 chr2 159227241 159227548 -94029035 - AluY SINE Alu -4 307 1 247 185 64 134 chr2 159227548 159227597 -94028986 - MARNA DNA Mariner -513 73 22 342 0 0 0 chr2 159228558 159228596 -94027987 + (CA)n Simple_repeat Simple_repeat 2 39 0 208 330 95 82 chr2 159228729 159229108 -94027475 + L2 LINE L2 2889 3272 0 725 264 35 39 chr2 159229165 159229306 -94027277 - MIR SINE MIR -29 233 92 2764 109 0 5 chr2 159229306 159229683 -94026900 + THE1C LTR MaLR 1 375 0 725 264 35 39 chr2 159229683 159229772 -94026811 - MIR SINE MIR -170 92 4 736 319 55 57 chr2 159230090 159230475 -94026108 + LTR16C LTR ERVL 108 491 0 1929 134 10 17 chr2 159231975 159232274 -94024309 - AluSx SINE Alu -7 305 9 313 309 183 0 chr2 159232291 159232466 -94024117 - L1ME4a LINE L1 -65 6056 5850 281 340 28 19 chr2 159232628 159232734 -94023849 + L2 LINE L2 3207 3313 0 949 156 48 48 chr2 159233244 159233475 -94023108 + MLT1C LTR MaLR 1 231 -236 716 257 141 12 chr2 159233565 159233814 -94022769 + MLT1C LTR MaLR 187 467 0 1733 260 62 41 chr2 159234267 159234848 -94021735 + MLT1E LTR MaLR 1 593 0 2119 94 7 0 chr2 159234947 159235248 -94021335 - AluSc SINE Alu 0 303 1 362 300 6 62 chr2 159235371 159235447 -94021136 - MIR3 SINE MIR -39 169 105 827 167 21 16 chr2 159235447 159235633 -94020950 + MER53 DNA DNA 2 188 -1 362 300 6 62 chr2 159235633 159235716 -94020867 - MIR3 SINE MIR -103 105 19 234 0 0 0 chr2 159236743 159236769 -94019814 + (TA)n Simple_repeat Simple_repeat 1 26 0 281 324 72 0 chr2 159237741 159237852 -94018731 - MIR SINE MIR -142 120 2 461 242 130 61 chr2 159239146 159239377 -94017206 - MIR SINE MIR -3 259 13 2306 112 22 27 chr2 159239441 159239807 -94016776 - THE1B LTR MaLR 0 364 1 2096 118 72 26 chr2 159239941 159240287 -94016296 - THE1B LTR MaLR -2 362 1 2187 112 11 0 chr2 159240754 159241041 -94015542 + AluSc SINE Alu 1 290 -19 893 253 128 22 chr2 159241282 159241594 -94014989 + L2 LINE L2 2435 2779 -535 404 317 36 24 chr2 159241610 159241777 -94014806 - MER5B DNA MER1_type -7 171 3 193 280 236 11 chr2 159241784 159241966 -94014617 + L2 LINE L2 2807 3029 -284 227 306 0 16 chr2 159242293 159242355 -94014228 + L3 LINE CR1 1516 1576 -1 1813 171 0 10 chr2 159243990 159244282 -94012301 - AluJb SINE Alu -23 289 1 180 0 0 0 chr2 159244295 159244315 -94012268 + (T)n Simple_repeat Simple_repeat 1 20 0 1384 190 53 11 chr2 159244547 159244866 -94011717 + MER61B LTR ERV1 1 425 0 1110 204 99 51 chr2 159246255 159246608 -94009975 - MLT1A2 LTR MaLR -4 370 1 24 32 0 0 chr2 159247108 159247139 -94009444 + AT_rich Low_complexity Low_complexity 1 31 0 225 0 0 0 chr2 159248108 159248133 -94008450 + (CA)n Simple_repeat Simple_repeat 1 25 0 213 295 126 66 chr2 159248777 159248960 -94007623 + MIR SINE MIR 18 211 -51 537 158 25 75 chr2 159249032 159249152 -94007431 - MER81 DNA DNA 0 114 1 927 196 84 18 chr2 159249272 159249497 -94007086 - MIR SINE MIR -21 241 2 206 301 20 87 chr2 159250787 159250983 -94005600 - L2 LINE L2 -227 3045 2863 330 291 10 19 chr2 159251444 159251547 -94005036 - MIR SINE MIR -1 261 160 188 255 21 0 chr2 159251709 159251756 -94004827 - MIR SINE MIR -128 134 87 1426 170 26 61 chr2 159252139 159252516 -94004067 - L1MB8 LINE L1 -37 6141 5778 1068 295 98 5 chr2 159252512 159252929 -94003654 - L1M4b LINE L1 -6219 640 185 * 310 219 31 0 chr2 159252962 159253026 -94003557 - L1M4b LINE L1 -6783 76 11 210 194 0 0 chr2 159253831 159253893 -94002690 + GA-rich Low_complexity Low_complexity 1 62 0 466 329 59 0 chr2 159255494 159255646 -94000937 + MIR3 SINE MIR 17 177 -31 300 339 65 45 chr2 159256004 159256249 -94000334 + MIR SINE MIR 13 262 0 230 310 0 0 chr2 159257272 159257330 -93999253 - MIR SINE MIR -96 112 55 202 388 0 0 chr2 159258022 159258089 -93998494 - L2 LINE L2 -7 3306 3240 232 271 55 21 chr2 159258293 159258387 -93998196 - MIR SINE MIR -63 145 74 383 269 186 0 chr2 159260441 159260586 -93995997 - MIR SINE MIR -67 195 24 388 267 101 68 chr2 159260590 159260990 -93995593 + MLT1I LTR MaLR 1 409 0 6756 57 7 8 chr2 159261516 159262466 -93994117 - L1PA4 LINE L1 -779 5367 4419 6378 47 2 1 chr2 159262466 159263256 -93993327 + L1PA4 LINE L1 5363 6154 -1 6076 92 61 12 chr2 159263675 159265170 -93991413 - L1PA13 LINE L1 -2 6161 4616 26584 33 2 0 chr2 159265297 159269141 -93987442 + L1PA3 LINE L1 1979 5829 -326 10658 33 0 0 chr2 159269241 159271294 -93985289 + L1PA3 LINE L1 4095 6151 -4 2254 128 2 22 chr2 159271304 159271711 -93984872 - HUERS-P1 LTR ERV1 -1586 4677 4279 14573 126 8 8 chr2 159271715 159273919 -93982664 - L1PA8 LINE L1 -4 6483 4267 2343 77 3 10 chr2 159273919 159274232 -93982351 - AluY SINE Alu 0 311 1 14573 126 8 8 chr2 159274232 159275189 -93981394 - L1PA8 LINE L1 -2219 4268 3312 10783 158 29 35 chr2 159275195 159278402 -93978181 - L1PA8 LINE L1 -3220 3241 10 5358 133 53 19 chr2 159278412 159279437 -93977146 - HUERS-P1 LTR ERV1 -1980 4283 3224 * 13758 122 53 86 chr2 159279430 159281086 -93975497 - HUERS-P1 LTR ERV1 -3467 2796 1273 237 65 0 0 chr2 159281086 159281117 -93975466 + (CA)n Simple_repeat Simple_repeat 2 32 0 13758 122 53 86 chr2 159281117 159282350 -93974233 - HUERS-P1 LTR ERV1 -4990 1273 1 994 126 0 0 chr2 159282350 159282493 -93974090 - LTR8 LTR ERV1 0 691 549 9598 161 23 10 chr2 159282493 159285561 -93971022 + L1MA3 LINE L1 3195 6300 -5 8619 123 15 5 chr2 159285570 159286964 -93969619 - Tigger1 DNA MER2_type -582 1836 429 1257 171 20 0 chr2 159287163 159287409 -93969174 + LTR43 LTR ERV1 186 436 -166 268 242 53 42 chr2 159287418 159287513 -93969070 + MER41E LTR ERV1 358 453 -59 1653 177 15 9 chr2 159287526 159287854 -93968729 - Tigger1 DNA MER2_type -1979 439 110 607 280 21 63 chr2 159289449 159289735 -93966848 - Charlie8 DNA MER1_type -2143 274 1 2255 84 24 0 chr2 159293870 159294167 -93962416 - AluSc SINE Alu -5 304 1 332 343 84 28 chr2 159294436 159294614 -93961969 - MIR3 SINE MIR -4 204 17 2713 179 47 25 chr2 159295866 159296419 -93960164 - L1MC3 LINE L1 -84 7701 7137 5599 238 54 54 chr2 159296421 159296533 -93960050 - L1M4 LINE L1 -1424 4722 4611 2110 113 10 10 chr2 159296533 159296825 -93959758 + AluSg SINE Alu 1 292 -18 5599 238 54 54 chr2 159296825 159298270 -93958313 - L1M4 LINE L1 -1535 4611 3167 1915 123 0 51 chr2 159298270 159298602 -93957981 - L1PA16 LINE L1 -10 6156 5842 5599 238 54 54 chr2 159298602 159298770 -93957813 - L1M4 LINE L1 -2979 3167 3000 1995 129 13 35 chr2 159298770 159299081 -93957502 - AluSx SINE Alu -5 307 4 5599 238 54 54 chr2 159299081 159299675 -93956908 - L1M4 LINE L1 -3145 3001 2401 1514 198 162 44 chr2 159299680 159300177 -93956406 + MER52A LTR ERV1 1 661 -1094 5448 201 9 4 chr2 159301171 159302117 -93954466 + L1P4 LINE L1 3 953 -5896 432 252 78 0 chr2 159302113 159302228 -93954355 + L1P4 LINE L1 1538 1661 -5188 * 9514 221 28 12 chr2 159302235 159302935 -93953648 + L1P4 LINE L1 3500 4188 -2681 3048 75 51 14 chr2 159302935 159303363 -93953220 + MLT2A1 LTR ERVL 1 444 0 9514 221 28 12 chr2 159303363 159305485 -93951098 + L1P4 LINE L1 4188 6368 -501 18134 155 28 92 chr2 159305486 159307642 -93948941 + L1PA16 LINE L1 2 1732 -4414 2309 110 0 0 chr2 159307642 159307952 -93948631 - AluSg SINE Alu 0 310 1 18134 155 28 92 chr2 159307952 159310251 -93946332 + L1PA16 LINE L1 1732 4175 -1971 12580 101 16 1 chr2 159310485 159313104 -93943479 + L1PA7 LINE L1 3511 6151 -3 2800 142 43 2 chr2 159313104 159313583 -93943000 + L1PA16 LINE L1 5658 6163 -3 243 0 0 0 chr2 159313609 159313636 -93942947 + (CA)n Simple_repeat Simple_repeat 2 28 0 275 259 185 0 chr2 159315127 159315208 -93941375 + L2 LINE L2 3201 3296 -17 370 308 0 0 chr2 159315237 159315342 -93941241 + (TGAA)n Simple_repeat Simple_repeat 1 105 0 557 284 35 18 chr2 159315442 159315611 -93940972 - MER5B DNA MER1_type -1 177 6 22 0 0 0 chr2 159315894 159315916 -93940667 + AT_rich Low_complexity Low_complexity 1 22 0 1487 195 11 25 chr2 159316030 159316312 -93940271 + AluJo SINE Alu 1 278 -34 226 305 86 9 chr2 159316426 159316531 -93940052 - MIR SINE MIR -100 162 50 * 441 354 35 18 chr2 159316489 159316715 -93939868 + MIR SINE MIR 20 249 -13 964 290 44 61 chr2 159316857 159317381 -93939202 - MLT1K LTR MaLR -2 586 72 390 219 10 0 chr2 159317490 159317586 -93938997 - L1M4 LINE L1 -1051 5095 4999 21 0 0 0 chr2 159318132 159318153 -93938430 + AT_rich Low_complexity Low_complexity 1 21 0 324 319 21 7 chr2 159318620 159318764 -93937819 - L1ME2 LINE L1 -22 6142 5997 1039 229 99 66 chr2 159318810 159318948 -93937635 - L1ME2 LINE L1 -327 5837 5705 2160 100 3 3 chr2 159318948 159319247 -93937336 - AluSc SINE Alu -10 299 1 1039 229 99 66 chr2 159319247 159319825 -93936758 - L1ME2 LINE L1 -459 5705 5112 562 276 79 23 chr2 159319795 159320099 -93936484 - L1ME2 LINE L1 -3373 2773 2453 * 956 224 58 10 chr2 159320114 159320416 -93936167 + MLT1A1 LTR MaLR 1 351 -14 379 269 88 0 chr2 159320432 159320614 -93935969 - L1ME2 LINE L1 -3706 2440 2243 1953 213 62 13 chr2 159320640 159321255 -93935328 - L1M4 LINE L1 -2948 3696 3052 1154 207 40 19 chr2 159321261 159321584 -93934999 - L1M4 LINE L1 -4988 1554 1225 4692 100 14 14 chr2 159321896 159322608 -93933975 - L1PA13 LINE L1 -1 6162 5451 369 323 87 43 chr2 159322812 159323205 -93933378 + MLT1K LTR MaLR 168 577 -11 1622 214 107 26 chr2 159323754 159324213 -93932370 + MLT1F1 LTR MaLR 72 567 0 234 336 76 23 chr2 159324597 159324728 -93931855 + MLT1I LTR MaLR 151 288 -121 2220 122 38 78 chr2 159324790 159325241 -93931342 - Tigger2a DNA MER2_type -1 433 1 360 187 224 8 chr2 159325269 159325403 -93931180 + L1M4 LINE L1 3788 3950 -2196 233 218 18 18 chr2 159325555 159325610 -93930973 - MLT1I LTR MaLR -10 399 345 326 347 89 20 chr2 159325899 159326147 -93930436 - L2 LINE L2 -1113 2201 1937 302 297 97 32 chr2 159326155 159326310 -93930273 - MIR3 SINE MIR -24 184 20 21 71 0 0 chr2 159326646 159326688 -93929895 + AT_rich Low_complexity Low_complexity 1 42 0 228 175 63 0 chr2 159328038 159328101 -93928482 - L1MB4 LINE L1 -2 6178 6112 1725 156 64 0 chr2 159328572 159328854 -93927729 + AluSx SINE Alu 1 300 -12 404 298 113 7 chr2 159329854 159330005 -93926578 + MER5B DNA MER1_type 9 175 -3 202 300 8 62 chr2 159330050 159330180 -93926403 - MIR SINE MIR -41 221 99 7045 151 39 31 chr2 159331820 159333699 -93922884 + L1MA8 LINE L1 3911 5826 -465 315 0 0 0 chr2 159333699 159333734 -93922849 + (CA)n Simple_repeat Simple_repeat 2 36 0 7045 151 39 31 chr2 159333734 159334194 -93922389 + L1MA8 LINE L1 5826 6281 -10 34 0 0 0 chr2 159334196 159334230 -93922353 + AT_rich Low_complexity Low_complexity 1 34 0 921 145 0 0 chr2 159334281 159334419 -93922164 - AluSg/x SINE Alu -9 303 166 1526 159 48 22 chr2 159334420 159334690 -93921893 - AluJb SINE Alu -35 277 1 610 332 14 19 chr2 159335845 159336056 -93920527 + LTR33 LTR ERVL 1 210 -311 594 247 35 17 chr2 159336127 159336301 -93920282 + LTR33 LTR ERVL 335 511 -10 423 160 14 83 chr2 159339824 159339943 -93916640 - MER5A DNA MER1_type -77 112 4 218 309 118 40 chr2 159339960 159340112 -93916471 + MER5B DNA MER1_type 2 165 -13 204 330 38 28 chr2 159340186 159340292 -93916291 + MIR SINE MIR 47 153 -109 22 56 0 0 chr2 159341110 159341146 -93915437 + AT_rich Low_complexity Low_complexity 1 36 0 1561 163 3 97 chr2 159341489 159341800 -93914783 + AluJb SINE Alu 1 283 -29 420 37 0 0 chr2 159341800 159341854 -93914729 + (CA)n Simple_repeat Simple_repeat 1 54 0 1889 191 57 71 chr2 159341936 159342445 -93914138 - MLT1D LTR MaLR -2 503 2 214 200 0 0 chr2 159342718 159342758 -93913825 + (TA)n Simple_repeat Simple_repeat 1 40 0 265 312 133 12 chr2 159342821 159342994 -93913589 + L2 LINE L2 2499 2692 -622 227 278 237 0 chr2 159343186 159343283 -93913300 + L2 LINE L2 3153 3272 0 211 139 0 23 chr2 159345374 159345417 -93911166 + (TAA)n Simple_repeat Simple_repeat 1 42 0 394 329 15 15 chr2 159345577 159345714 -93910869 - MIR SINE MIR -121 141 5 378 339 21 16 chr2 159346089 159346281 -93910302 + MIR SINE MIR 56 248 -14 237 309 22 0 chr2 159346672 159346741 -93909842 + (TA)n Simple_repeat Simple_repeat 1 67 -75 2797 197 22 0 chr2 159346741 159347279 -93909304 - MER44D DNA MER2_type 0 605 1 237 309 22 0 chr2 159347279 159347348 -93909235 + (TA)n Simple_repeat Simple_repeat 67 142 0 3262 155 20 72 chr2 159347650 159348467 -93908116 + LTR1 LTR ERV1 1 774 -11 331 283 75 32 chr2 159349199 159349386 -93907197 + MIR SINE MIR 65 259 -3 341 387 75 9 chr2 159349753 159350086 -93906497 - L1M4 LINE L1 -1922 4224 3870 257 218 0 23 chr2 159350240 159350271 -93906312 + (TATATG)n Simple_repeat Simple_repeat 3 33 -54 1817 126 77 47 chr2 159350271 159350635 -93905948 + THE1C LTR MaLR 1 375 0 257 218 0 23 chr2 159350635 159350690 -93905893 + (TATATG)n Simple_repeat Simple_repeat 33 87 0 12312 197 29 80 chr2 159350731 159352896 -93903687 + L1PA16 LINE L1 2 2276 -4593 1714 191 0 20 chr2 159352896 159353189 -93903394 + AluJb SINE Alu 1 287 -25 12312 197 29 80 chr2 159353189 159357386 -93899197 + L1PA16 LINE L1 2276 5958 -911 2409 77 0 22 chr2 159357386 159357697 -93898886 + AluY SINE Alu 8 311 0 12312 197 29 80 chr2 159357697 159358557 -93898026 + L1PA16 LINE L1 5958 6860 -9 431 251 115 20 chr2 159358657 159358982 -93897601 + L1ME LINE L1 5087 5439 -723 343 290 67 5 chr2 159359530 159359711 -93896872 + L1ME LINE L1 5357 5548 -573 978 174 108 15 chr2 159360000 159360310 -93896273 - MSTD LTR MaLR -6 390 1 1141 117 23 0 chr2 159361393 159361564 -93895019 - AluSq SINE Alu -13 300 126 11228 91 9 3 chr2 159362334 159364719 -93891864 - L1PA7 LINE L1 -13 6141 3764 1591 192 38 3 chr2 159364746 159365033 -93891550 - AluJb SINE Alu -15 297 1 294 318 12 12 chr2 159365129 159365214 -93891369 + MIR SINE MIR 28 112 -150 267 275 117 33 chr2 159365278 159365398 -93891185 + L2 LINE L2 3136 3265 -7 1686 159 64 19 chr2 159365598 159365957 -93890626 + THE1C LTR MaLR 1 375 0 9348 140 10 43 chr2 159365960 159367590 -93888993 + THE1C-int LTR MaLR 4 1579 -1 669 134 55 16 chr2 159367590 159367717 -93888866 + THE1C LTR MaLR 6 137 -238 5688 146 83 17 chr2 159367739 159368815 -93887768 + THE1C-int LTR MaLR 425 1571 -9 2032 154 5 29 chr2 159368823 159369207 -93887376 + THE1C LTR MaLR 1 375 0 967 185 60 5 chr2 159369434 159369650 -93886933 - Tigger1 DNA MER2_type 0 2418 2191 1160 132 0 0 chr2 159369651 159369833 -93886750 - Tigger1 DNA MER2_type -407 2011 1830 17615 159 63 11 chr2 159369846 159370648 -93885935 + L1M1 LINE L1 16 775 -6790 10560 144 10 3 chr2 159370648 159373241 -93883342 - L1PA10 LINE L1 -3 6165 3559 17615 159 63 11 chr2 159373241 159375784 -93880799 + L1M1 LINE L1 775 3536 -4029 2230 134 9 3 chr2 159375796 159376146 -93880437 - THE1B LTR MaLR -12 352 1 3564 229 44 10 chr2 159376147 159377203 -93879380 + L1M1 LINE L1 3533 4623 -2942 315 0 0 0 chr2 159377203 159377238 -93879345 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 585 141 10 0 chr2 159377239 159377338 -93879245 - LTR8 LTR ERV1 -107 584 485 4492 89 38 10 chr2 159377344 159378054 -93878529 - HUERS-P1 LTR ERV1 -643 5303 4574 574 67 22 11 chr2 159378040 159378130 -93878453 - HUERS-P1 LTR ERV1 -1509 4754 4664 * 28643 44 39 2 chr2 159378130 159381946 -93874637 + L1P LINE L1 3 3959 -2187 1796 161 0 12 chr2 159382046 159382382 -93874201 - L1P LINE L1 -2256 3890 3559 13361 152 78 7 chr2 159382383 159384925 -93871658 + L1M1 LINE L1 815 3536 -4029 2230 134 9 3 chr2 159384937 159385287 -93871296 - THE1B LTR MaLR -12 352 1 3564 229 44 10 chr2 159385288 159386344 -93870239 + L1M1 LINE L1 3533 4623 -2942 315 0 0 0 chr2 159386344 159386379 -93870204 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 585 141 10 0 chr2 159386380 159386479 -93870104 - LTR8 LTR ERV1 -107 584 485 4507 90 38 8 chr2 159386485 159387194 -93869389 - HUERS-P1 LTR ERV1 -643 5303 4574 574 67 22 11 chr2 159387180 159387270 -93869313 - HUERS-P1 LTR ERV1 -1509 4754 4664 * 12955 53 79 4 chr2 159387270 159389083 -93867500 + L1P LINE L1 3 1952 -4194 370 328 35 0 chr2 159390158 159390274 -93866309 - L2 LINE L2 0 3272 3153 2982 256 79 75 chr2 159392220 159393847 -93862736 + L1MA4A LINE L1 1 1633 -5576 6397 188 78 87 chr2 159393847 159395617 -93860966 + MER52A LTR ERV1 1 1755 0 13681 205 40 25 chr2 159395617 159397200 -93859383 + L1MA4A LINE L1 1514 3072 -4293 4242 16 6 0 chr2 159397200 159397690 -93858893 - L1PA2 LINE L1 0 6155 5663 13681 205 40 25 chr2 159397690 159401620 -93854963 + L1MA4A LINE L1 3072 7095 -270 1516 142 0 4 chr2 159401718 159401978 -93854605 + L1MA4A LINE L1 7100 7358 -7 23 0 0 0 chr2 159402125 159402148 -93854435 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr2 159402564 159402593 -93853990 + AT_rich Low_complexity Low_complexity 1 29 0 818 257 112 15 chr2 159402677 159403056 -93853527 - L1 LINE L1 -2081 4065 3651 308 253 0 0 chr2 159403086 159403169 -93853414 - L1 LINE L1 -3825 2321 2239 1430 247 17 62 chr2 159403177 159403582 -93853001 + L1MA7 LINE L1 5 391 -5890 23 33 0 0 chr2 159403633 159403663 -93852920 + AT_rich Low_complexity Low_complexity 1 30 0 371 305 73 12 chr2 159403668 159403832 -93852751 - L1MEc LINE L1 -2596 3484 3311 * 18468 154 14 13 chr2 159403829 159403944 -93852639 + L1PA11 LINE L1 1926 2039 -4135 2132 119 10 0 chr2 159403944 159404237 -93852346 + AluSq SINE Alu 1 296 -17 18468 154 14 13 chr2 159404237 159408371 -93848212 + L1PA11 LINE L1 2039 6174 0 2405 90 0 3 chr2 159408467 159408779 -93847804 + AluY SINE Alu 1 311 0 324 197 31 7 chr2 159408894 159409185 -93847398 + (TA)n Simple_repeat Simple_repeat 1 298 0 24 0 0 0 chr2 159409185 159409209 -93847374 + AT_rich Low_complexity Low_complexity 1 24 0 10943 197 35 22 chr2 159409218 159411770 -93844813 + L1MA7 LINE L1 2764 5379 -1116 2044 127 3 25 chr2 159411770 159412086 -93844497 + AluSx SINE Alu 1 309 -3 10943 197 35 22 chr2 159412086 159413218 -93843365 + L1MA7 LINE L1 5379 6495 0 309 301 84 52 chr2 159413242 159413684 -93842899 - L1MEc LINE L1 -4040 2221 1766 461 333 105 3 chr2 159413712 159414006 -93842577 - L1MEc LINE L1 -4579 1682 1359 266 215 38 24 chr2 159414064 159414173 -93842410 - L1MEc LINE L1 -4886 1222 1073 21 0 0 0 chr2 159414198 159414219 -93842364 + AT_rich Low_complexity Low_complexity 1 21 0 329 264 82 0 chr2 159414222 159414364 -93842219 - L1MEc LINE L1 -5097 994 851 287 111 185 0 chr2 159415741 159415795 -93840788 + MLT2C2 LTR ERVL 1 64 -400 3633 204 122 90 chr2 159415846 159417159 -93839424 + MLT1-int LTR MaLR 2 1356 -15 258 222 0 133 chr2 159417281 159417371 -93839212 + MLT1C LTR MaLR 190 267 -200 211 154 31 0 chr2 159417690 159417755 -93838828 + (TA)n Simple_repeat Simple_repeat 2 68 0 206 410 9 9 chr2 159417811 159417916 -93838667 - MIR SINE MIR -63 145 41 417 314 54 5 chr2 159418945 159419130 -93837453 - MLT1L LTR MaLR -2 613 420 334 168 141 32 chr2 159419271 159419408 -93837175 - L1M2 LINE L1 -621 5543 5395 646 301 83 26 chr2 159419542 159419808 -93836775 - MLT1L LTR MaLR -326 289 9 402 234 172 16 chr2 159422062 159422190 -93834393 - MIR SINE MIR -50 212 65 767 163 77 41 chr2 159422213 159422409 -93834174 + L1MA9 LINE L1 6106 6308 -4 342 270 133 21 chr2 159423325 159423563 -93833020 - MLT1I LTR MaLR -10 399 63 1401 191 36 18 chr2 159423700 159423967 -93832616 - MLT1E1 LTR MaLR -31 623 352 2569 127 33 5 chr2 159423967 159424138 -93832445 + LTR57 LTR ERVL 1 166 -245 450 0 0 0 chr2 159424138 159424188 -93832395 + (CA)n Simple_repeat Simple_repeat 1 50 0 2569 127 33 5 chr2 159424188 159424409 -93832174 + LTR57 LTR ERVL 166 404 -7 993 274 29 0 chr2 159424424 159424669 -93831914 - MLT1E1 LTR MaLR -341 252 1 408 368 25 0 chr2 159425723 159425962 -93830621 + L1MC/D LINE L1 5351 5595 -2213 1487 157 15 67 chr2 159425974 159426317 -93830266 + L1MA10 LINE L1 5998 6322 -12 23 54 0 0 chr2 159426649 159426686 -93829897 + AT_rich Low_complexity Low_complexity 1 37 0 2527 37 3 0 chr2 159426774 159427072 -93829511 - AluY SINE Alu -12 299 1 829 295 106 43 chr2 159429013 159429530 -93827053 + L2 LINE L2 2766 3311 -2 391 336 22 8 chr2 159430453 159430587 -93825996 + L2 LINE L2 3132 3267 -5 21 89 0 0 chr2 159432428 159432484 -93824099 + AT_rich Low_complexity Low_complexity 1 56 0 10702 176 17 11 chr2 159434551 159436351 -93820232 + L1P LINE L1 2623 4440 -1706 2204 121 55 3 chr2 159436351 159436697 -93819886 - THE1B LTR MaLR 0 364 1 10702 176 17 11 chr2 159436697 159436980 -93819603 + L1P LINE L1 4440 4720 -1426 3690 147 31 48 chr2 159437117 159437851 -93818732 + MER52A LTR ERV1 1034 1755 0 382 281 120 0 chr2 159437857 159438049 -93818534 - L1MCa LINE L1 -3753 2673 2459 694 64 0 11 chr2 159438074 159438168 -93818415 - AluSg/x SINE Alu -26 284 192 670 169 153 16 chr2 159438168 159438213 -93818370 - L1MCa LINE L1 -3963 2463 2426 1634 128 0 0 chr2 159438213 159438455 -93818128 - L1PA12 LINE L1 -15 6153 5912 670 169 153 16 chr2 159438455 159438630 -93817953 - L1MCa LINE L1 -4000 2426 2261 2713 181 62 12 chr2 159438632 159439201 -93817382 - MER50 LTR ERV1 -137 597 1 211 410 0 0 chr2 159439322 159439422 -93817161 - MIR SINE MIR -61 147 48 626 220 168 55 chr2 159440354 159440700 -93815883 + L1ME1 LINE L1 25 409 -6014 1401 263 84 41 chr2 159440992 159442035 -93814548 + L1ME1 LINE L1 819 1904 -4905 2938 226 54 23 chr2 159442055 159443521 -93813062 + L1ME1 LINE L1 5440 6943 -18 22 0 0 0 chr2 159443521 159443543 -93813040 + AT_rich Low_complexity Low_complexity 1 22 0 253 323 38 53 chr2 159443844 159443977 -93812606 + MIR SINE MIR 23 153 -109 22 0 0 0 chr2 159445217 159445239 -93811344 + AT_rich Low_complexity Low_complexity 1 22 0 399 289 56 28 chr2 159445518 159445698 -93810885 - MIR SINE MIR -26 236 52 1324 212 131 63 chr2 159445871 159446282 -93810301 + LTR40a LTR ERVL 80 518 -1 337 234 303 14 chr2 159447586 159447731 -93808852 - MER5A DNA MER1_type -1 188 2 1961 146 3 16 chr2 159447916 159448224 -93808359 + AluSx SINE Alu 1 304 -8 22 35 0 0 chr2 159448276 159448305 -93808278 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr2 159448559 159448582 -93808001 + AT_rich Low_complexity Low_complexity 1 23 0 4090 221 45 75 chr2 159448676 159450079 -93806504 + L1ME1 LINE L1 3623 4980 -1166 2350 82 3 10 chr2 159450079 159450385 -93806198 + AluY SINE Alu 1 304 -7 4090 221 45 75 chr2 159450385 159450467 -93806116 + L1ME1 LINE L1 4980 5063 -1083 2418 255 42 20 chr2 159450471 159451165 -93805418 + L1ME1 LINE L1 5414 6122 -44 28 0 0 0 chr2 159451274 159451302 -93805281 + AT_rich Low_complexity Low_complexity 1 28 0 1376 234 139 52 chr2 159451601 159452501 -93804082 + L1MC5 LINE L1 6906 7883 -78 299 154 15 0 chr2 159452876 159452941 -93803642 + L1MA3 LINE L1 6240 6305 0 21 36 0 0 chr2 159453455 159453483 -93803100 + AT_rich Low_complexity Low_complexity 1 28 0 192 77 0 0 chr2 159455458 159455484 -93801099 + (TG)n Simple_repeat Simple_repeat 2 27 0 584 333 37 0 chr2 159455707 159455950 -93800633 + MIR SINE MIR 1 252 -10 2601 11 0 0 chr2 159457106 159457389 -93799194 + AluYb8 SINE Alu 32 314 -4 370 328 35 0 chr2 159458707 159458823 -93797760 - L2 LINE L2 0 3272 3153 2251 232 23 4 chr2 159460748 159461218 -93795365 + L1M2 LINE L1 3 481 -6368 5893 127 18 18 chr2 159461354 159462390 -93794193 - L1M1 LINE L1 -4289 3276 2241 2754 77 6 0 chr2 159462992 159463345 -93793238 + THE1A LTR MaLR 1 355 0 11456 104 9 1 chr2 159463345 159464912 -93791671 + THE1A-int LTR MaLR 1 1580 0 2593 83 20 3 chr2 159464912 159465261 -93791322 + THE1A LTR MaLR 1 355 0 278 259 0 0 chr2 159465838 159465892 -93790691 + L1PA15-16 LINE L1 1317 1370 -5479 1322 197 47 7 chr2 159466166 159466440 -93790143 + AluJo SINE Alu 22 306 -6 28 71 0 0 chr2 159466440 159466496 -93790087 + AT_rich Low_complexity Low_complexity 1 56 0 181 349 0 0 chr2 159466499 159466542 -93790041 - MIR SINE MIR -117 91 49 5934 161 24 9 chr2 159466612 159468394 -93788189 - L1MA8 LINE L1 -6 6285 4477 705 169 233 72 chr2 159468388 159468421 -93788162 - L1MA8 LINE L1 -1955 4191 4165 * 180 0 0 0 chr2 159468421 159468441 -93788142 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 705 169 233 72 chr2 159468441 159468498 -93788085 - L1MA8 LINE L1 -1981 4165 4118 2180 122 0 0 chr2 159468498 159468792 -93787791 + AluSg SINE Alu 1 294 -16 705 169 233 72 chr2 159468792 159468949 -93787634 - L1MA8 LINE L1 -2028 4118 3903 951 202 11 16 chr2 159469003 159469191 -93787392 + MER5A DNA MER1_type 1 187 -2 245 313 250 6 chr2 159469221 159469397 -93787186 + MIR SINE MIR 41 259 -3 255 276 30 22 chr2 159472049 159472183 -93784400 - L1ME LINE L1 -218 5903 5769 * 931 187 45 18 chr2 159472182 159472602 -93783981 - L1MC4 LINE L1 -140 7902 7363 368 115 0 0 chr2 159472604 159472680 -93783903 - AluSc SINE Alu 0 308 233 1576 149 7 0 chr2 159472754 159473036 -93783547 + L1MA9 LINE L1 6028 6311 -1 240 35 0 0 chr2 159473728 159473757 -93782826 + (TTTTC)n Simple_repeat Simple_repeat 1 29 0 1127 107 11 0 chr2 159473759 159473936 -93782647 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 1033 175 71 0 chr2 159473939 159474086 -93782497 - AluJo SINE Alu -32 280 116 210 37 0 0 chr2 159474086 159474113 -93782470 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1033 175 71 0 chr2 159474113 159474148 -93782435 - AluJo SINE Alu -196 116 85 347 24 0 0 chr2 159474148 159474190 -93782393 - AluSp/q SINE Alu -53 250 209 638 167 32 90 chr2 159474190 159474346 -93782237 - AluJo SINE Alu -165 147 1 24 0 0 0 chr2 159474630 159474654 -93781929 + AT_rich Low_complexity Low_complexity 1 24 0 455 330 11 22 chr2 159474871 159475050 -93781533 - MIR SINE MIR -3 259 83 694 254 132 27 chr2 159475054 159475274 -93781309 - MER45C DNA AcHobo -1 952 710 * 1199 293 42 22 chr2 159475267 159475622 -93780961 - MER45C DNA AcHobo -541 412 51 2259 120 3 0 chr2 159478496 159478804 -93777779 - AluSq SINE Alu -2 311 3 6721 210 32 7 chr2 159479431 159482296 -93774287 - L1MC1 LINE L1 -15 6318 3377 464 342 31 0 chr2 159483813 159483974 -93772609 + MIR SINE MIR 87 252 -10 277 313 215 12 chr2 159484074 159484237 -93772346 + MIR SINE MIR 26 221 -41 2382 69 0 38 chr2 159484913 159485231 -93771352 - AluY SINE Alu -4 307 2 21 71 0 0 chr2 159486798 159486840 -93769743 + AT_rich Low_complexity Low_complexity 1 42 0 374 305 152 27 chr2 159487077 159487484 -93769099 - L1ME3A LINE L1 -223 5947 5490 23 0 0 0 chr2 159487535 159487558 -93769025 + AT_rich Low_complexity Low_complexity 1 23 0 216 0 0 0 chr2 159487755 159487779 -93768804 + (A)n Simple_repeat Simple_repeat 1 24 0 816 249 48 28 chr2 159487779 159488117 -93768466 + L1MCa LINE L1 811 1315 -5101 26249 137 7 12 chr2 159488118 159494541 -93762042 + L1PA8 LINE L1 5 6485 -2 1102 288 87 47 chr2 159494570 159494844 -93761739 + L1MCa LINE L1 1346 1608 -4999 486 0 0 0 chr2 159494844 159494898 -93761685 + (CA)n Simple_repeat Simple_repeat 2 55 0 1102 288 87 47 chr2 159494898 159495499 -93761084 + L1MCa LINE L1 1608 2256 -4351 791 253 11 0 chr2 159495502 159495676 -93760907 + MLT1D LTR MaLR 6 181 -324 1082 167 20 10 chr2 159495683 159495881 -93760702 + MLT1D LTR MaLR 293 492 -13 3229 239 42 33 chr2 159495888 159496268 -93760315 + L1MCa LINE L1 2253 2628 -3798 1443 196 76 28 chr2 159496268 159496625 -93759958 + MLT1A2 LTR MaLR 1 374 0 3229 239 42 33 chr2 159496625 159497610 -93758973 + L1MCa LINE L1 2628 3597 -2829 997 275 126 59 chr2 159497644 159498166 -93758417 + MLT1F1 LTR MaLR 8 563 -4 1313 281 71 4 chr2 159498168 159498720 -93757863 + L1MCa LINE L1 3618 4206 -2220 1735 253 77 16 chr2 159499236 159499935 -93756648 + L1MCa LINE L1 4191 4932 -1494 459 324 14 29 chr2 159499935 159500142 -93756441 - HAL1 LINE L1 -1638 869 666 282 367 56 47 chr2 159500282 159500489 -93756094 - HAL1 LINE L1 -1907 600 387 2447 91 0 0 chr2 159500489 159500797 -93755786 + AluSc SINE Alu 1 308 -1 282 367 56 47 chr2 159500797 159500927 -93755656 - HAL1 LINE L1 -2120 387 260 270 81 0 0 chr2 159501256 159501293 -93755290 + (TG)n Simple_repeat Simple_repeat 2 38 0 31 26 0 0 chr2 159501435 159501473 -93755110 + AT_rich Low_complexity Low_complexity 1 38 0 236 132 0 0 chr2 159501629 159501667 -93754916 - L1M4 LINE L1 -1542 4604 4567 3907 179 57 45 chr2 159501711 159502640 -93753943 - L1MB3 LINE L1 -32 6151 5210 261 233 100 0 chr2 159502652 159502742 -93753841 - L1MEd LINE L1 -5099 1020 922 596 305 75 31 chr2 159502789 159503109 -93753474 + LTR33 LTR ERVL 97 469 -52 245 246 0 0 chr2 159503256 159503325 -93753258 - L1MB3 LINE L1 -1091 5055 4987 238 217 91 66 chr2 159503575 159503773 -93752810 - L1M4 LINE L1 -1686 4460 4258 2002 148 110 30 chr2 159503899 159504299 -93752284 - MSTB1 LTR MaLR 0 432 1 1621 189 49 43 chr2 159505075 159505445 -93751138 + MLT1B LTR MaLR 1 372 -18 2204 147 35 47 chr2 159505468 159505891 -93750692 + MSTB1 LTR MaLR 15 432 0 423 0 0 0 chr2 159506378 159506425 -93750158 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 21 0 0 0 chr2 159507258 159507279 -93749304 + AT_rich Low_complexity Low_complexity 1 21 0 240 381 89 60 chr2 159507881 159508196 -93748387 - L2 LINE L2 0 3272 2949 1324 173 0 4 chr2 159508217 159508442 -93748141 - MER2 DNA MER2_type 0 345 122 790 216 14 0 chr2 159508442 159508590 -93747993 + FRAM SINE Alu 1 150 -26 632 145 22 36 chr2 159508602 159508740 -93747843 - MER2 DNA MER2_type -209 136 1 35 41 0 0 chr2 159508904 159508953 -93747630 + AT_rich Low_complexity Low_complexity 1 49 0 1640 149 16 42 chr2 159509053 159509361 -93747222 - AluJb SINE Alu -12 300 1 298 284 28 37 chr2 159509437 159509546 -93747037 - MLT1I LTR MaLR -301 108 1 2445 103 106 8 chr2 159510319 159510716 -93745867 - L1PA16 LINE L1 -2 6164 5729 23 33 0 0 chr2 159511128 159511158 -93745425 + AT_rich Low_complexity Low_complexity 1 30 0 667 239 57 79 chr2 159512573 159512853 -93743730 - Charlie8 DNA MER1_type -2143 274 1 5310 98 8 27 chr2 159513156 159513976 -93742607 + L1MA2 LINE L1 5500 6304 0 242 203 0 16 chr2 159516124 159516188 -93740395 + G-rich Low_complexity Low_complexity 4 66 0 461 348 22 6 chr2 159516721 159516902 -93739681 - MIR3 SINE MIR -4 204 21 277 255 10 69 chr2 159517902 159518004 -93738579 + MIR SINE MIR 82 177 -85 4116 68 2 0 chr2 159518052 159518585 -93737998 + L1PA7 LINE L1 5619 6152 -2 669 309 44 63 chr2 159518845 159519211 -93737372 - L2 LINE L2 -5 3308 2950 934 239 59 0 chr2 159519216 159519455 -93737128 - L2 LINE L2 -474 2840 2588 23 0 0 0 chr2 159519940 159519963 -93736620 + AT_rich Low_complexity Low_complexity 1 23 0 29 60 0 0 chr2 159520067 159520117 -93736466 + AT_rich Low_complexity Low_complexity 1 50 0 236 172 62 31 chr2 159520129 159520257 -93736326 + (TA)n Simple_repeat Simple_repeat 1 132 0 703 216 0 14 chr2 159520650 159520789 -93735794 - MLT2D LTR ERVL -105 309 173 1738 214 20 6 chr2 159520880 159521231 -93735352 + MLT1A1 LTR MaLR 10 365 0 281 281 12 12 chr2 159521467 159521549 -93735034 + MLT1I LTR MaLR 15 96 -313 233 247 39 0 chr2 159521611 159521688 -93734895 - MLT1E2 LTR MaLR 0 626 547 * 2000 189 12 34 chr2 159521687 159522061 -93734522 + MLT2D LTR ERVL 7 373 -41 396 0 0 0 chr2 159522061 159522105 -93734478 + (CA)n Simple_repeat Simple_repeat 2 45 0 2000 189 12 34 chr2 159522105 159522147 -93734436 + MLT2D LTR ERVL 373 414 0 655 220 17 0 chr2 159522147 159522265 -93734318 + MLT1I LTR MaLR 99 218 -191 322 287 56 9 chr2 159522291 159522399 -93734184 + MLT1I LTR MaLR 278 390 -19 1087 275 83 57 chr2 159522868 159523446 -93733137 - MLT1E LTR MaLR 0 593 1 1103 234 5 0 chr2 159524018 159524240 -93732343 - MER58A DNA MER1_type 0 224 2 368 259 12 12 chr2 159524331 159524416 -93732167 - L2 LINE L2 -38 3275 3191 42474 38 21 1 chr2 159526035 159532066 -93724517 - L1PA2 LINE L1 0 6155 4 289 280 107 79 chr2 159532310 159532600 -93723983 + MLT1L LTR MaLR 282 609 -6 28 48 0 0 chr2 159534421 159534463 -93722120 + AT_rich Low_complexity Low_complexity 1 42 0 1825 166 0 13 chr2 159534519 159534821 -93721762 - AluSx SINE Alu -14 298 1 997 200 17 0 chr2 159535232 159535412 -93721171 + MER5A DNA MER1_type 7 189 0 207 167 0 0 chr2 159536538 159536580 -93720003 + GA-rich Low_complexity Low_complexity 2 43 0 244 44 67 0 chr2 159536744 159536789 -93719794 + T-rich Low_complexity Low_complexity 1 48 0 1805 164 21 54 chr2 159536869 159537401 -93719182 + MLT2A2 LTR ERVL 1 413 -40 382 81 0 54 chr2 159537403 159537477 -93719106 + (TATATG)n Simple_repeat Simple_repeat 2 71 0 387 91 0 0 chr2 159537492 159537547 -93719036 + MLT2A2 LTR ERVL 399 453 0 397 281 61 61 chr2 159537942 159538205 -93718378 + HAL1b LINE L1 217 482 -866 1458 171 20 53 chr2 159538205 159538509 -93718074 - AluJb SINE Alu -18 294 1 397 281 61 61 chr2 159538509 159538540 -93718043 + HAL1b LINE L1 481 511 -837 268 24 49 0 chr2 159538988 159539029 -93717554 + (GA)n Simple_repeat Simple_repeat 2 44 0 1157 201 88 0 chr2 159539029 159539268 -93717315 - AluJo SINE Alu -51 261 2 213 39 0 0 chr2 159539268 159539294 -93717289 + (TA)n Simple_repeat Simple_repeat 2 27 0 301 317 73 41 chr2 159539346 159539469 -93717114 - L2 LINE L2 0 3313 3187 2614 83 103 17 chr2 159539939 159540348 -93716235 + MLT2A1 LTR ERVL 1 444 0 380 270 27 61 chr2 159540394 159540542 -93716041 + MIR SINE MIR 50 192 -70 325 303 91 43 chr2 159541009 159541217 -93715366 - LTR33 LTR ERVL -5 516 299 423 280 104 5 chr2 159541267 159541460 -93715123 - LTR33 LTR ERVL -297 224 13 2231 117 0 3 chr2 159542207 159542515 -93714068 + AluSg SINE Alu 1 307 -3 228 346 0 0 chr2 159543717 159543821 -93712762 + L1MB1 LINE L1 5825 5928 -193 512 250 34 14 chr2 159544812 159544960 -93711623 - L2 LINE L2 0 3313 3163 263 203 31 16 chr2 159544964 159545028 -93711555 - MER69 DNA AcHobo -9 2517 2453 1697 299 75 55 chr2 159545066 159546119 -93710464 - L2 LINE L2 -161 3152 2077 1751 201 61 6 chr2 159546120 159546548 -93710035 + MLT1D LTR MaLR 1 505 0 1010 204 15 58 chr2 159546548 159546822 -93709761 - L2 LINE L2 -1234 2080 1819 976 158 0 0 chr2 159546822 159546974 -93709609 + AluJb SINE Alu 135 286 -26 1489 196 156 50 chr2 159547099 159547154 -93709429 + L1MD2 LINE L1 5786 5834 -525 2335 104 59 0 chr2 159547154 159547508 -93709075 - THE1C LTR MaLR 0 375 1 1489 196 156 50 chr2 159547508 159547957 -93708626 + L1MD2 LINE L1 5834 6344 -15 348 272 53 42 chr2 159547968 159548251 -93708332 + L1ME3A LINE L1 2142 2427 -3719 474 151 11 11 chr2 159548302 159548395 -93708188 + L1MB4 LINE L1 6087 6179 -1 22 0 0 0 chr2 159548588 159548610 -93707973 + AT_rich Low_complexity Low_complexity 1 22 0 878 263 35 82 chr2 159550162 159550495 -93706088 + L1ME3A LINE L1 2853 3163 -2983 855 173 56 0 chr2 159550495 159550674 -93705909 + L1MB1 LINE L1 5980 6168 0 878 263 35 82 chr2 159550674 159550769 -93705814 + L1ME3A LINE L1 3163 3261 -2885 22 56 0 0 chr2 159550816 159550852 -93705731 + AT_rich Low_complexity Low_complexity 1 36 0 213 237 17 0 chr2 159550954 159551013 -93705570 + (CAA)n Simple_repeat Simple_repeat 3 62 0 21 36 0 0 chr2 159551196 159551224 -93705359 + AT_rich Low_complexity Low_complexity 1 28 0 280 282 124 42 chr2 159551374 159551704 -93704879 + L1P LINE L1 3885 4241 -1905 593 336 118 2 chr2 159551726 159552134 -93704449 + L1ME3A LINE L1 4311 4765 -1381 500 290 99 45 chr2 159552525 159553160 -93703423 + L1ME3A LINE L1 5264 5932 -238 25 0 0 0 chr2 159553425 159553450 -93703133 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr2 159553880 159553903 -93702680 + AT_rich Low_complexity Low_complexity 1 23 0 211 294 99 70 chr2 159555877 159556078 -93700505 + L2 LINE L2 3095 3301 -12 1848 167 43 35 chr2 159556303 159556675 -93699908 - MSTB LTR MaLR -51 375 1 22 35 0 0 chr2 159557772 159557801 -93698782 + AT_rich Low_complexity Low_complexity 1 29 0 258 32 0 0 chr2 159558637 159558668 -93697915 + (GA)n Simple_repeat Simple_repeat 2 32 0 2330 90 10 0 chr2 159558982 159559282 -93697301 + AluSg SINE Alu 1 303 -7 239 246 18 0 chr2 159561080 159561137 -93695446 + (CA)n Simple_repeat Simple_repeat 2 59 0 43400 43 3 1 chr2 159561943 159568070 -93688513 - L1PA4 LINE L1 -3 6152 10 12838 107 8 1 chr2 159568090 159570728 -93685855 - L1PA7 LINE L1 -16 6453 3790 5808 124 4 2 chr2 159570728 159571560 -93685023 - L1PA7 LINE L1 -5565 896 64 2140 118 14 0 chr2 159571752 159572041 -93684542 + AluSq SINE Alu 1 293 -20 443 195 31 0 chr2 159572165 159572293 -93684290 + (TCTA)n Simple_repeat Simple_repeat 3 134 0 234 156 0 0 chr2 159572310 159572355 -93684228 + (CCTA)n Simple_repeat Simple_repeat 1 45 0 198 103 0 0 chr2 159572463 159572492 -93684091 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 1337 263 111 11 chr2 159572762 159573287 -93683296 - L1ME1 LINE L1 -218 5948 5372 29 28 0 0 chr2 159573442 159573478 -93683105 + AT_rich Low_complexity Low_complexity 1 36 0 1825 161 3 3 chr2 159573500 159573786 -93682797 - AluJb SINE Alu -23 289 4 266 278 41 10 chr2 159573904 159574001 -93682582 + L1M4 LINE L1 4029 4128 -2018 271 333 237 5 chr2 159574444 159574642 -93681941 - MIR SINE MIR -16 246 3 348 267 0 0 chr2 159574829 159574904 -93681679 - MER112 DNA MER1_type -8 252 178 227 283 0 0 chr2 159575295 159575341 -93681242 + L2 LINE L2 3252 3297 -16 884 196 17 17 chr2 159576907 159577080 -93679503 + MLT1A2 LTR MaLR 1 173 -201 300 209 0 0 chr2 159577091 159577182 -93679401 + CT-rich Low_complexity Low_complexity 1 91 0 989 165 11 16 chr2 159577203 159577385 -93679198 + MLT1A2 LTR MaLR 189 369 -5 550 254 84 75 chr2 159577409 159577701 -93678882 + LTR33A LTR ERVL 138 435 -88 1262 162 28 114 chr2 159577701 159578097 -93678486 - MLT1A1 LTR MaLR 0 365 4 550 254 84 75 chr2 159578097 159578151 -93678432 + LTR33A LTR ERVL 435 487 -36 23 92 0 0 chr2 159579216 159579281 -93677302 + AT_rich Low_complexity Low_complexity 1 65 0 1236 153 16 0 chr2 159580416 159580606 -93675977 + AluSg/x SINE Alu 105 297 -13 5027 143 32 8 chr2 159580725 159582376 -93674207 + L1PA16 LINE L1 4480 6157 -9 473 329 12 6 chr2 159582524 159582691 -93673892 + L2 LINE L2 2249 2416 -898 468 263 0 17 chr2 159583437 159583555 -93673028 - LTR28 LTR ERV1 0 1020 905 1312 233 176 99 chr2 159583597 159584396 -93672187 - LTR28 LTR ERV1 -38 982 1 782 276 60 5 chr2 159584724 159584941 -93671642 - MIR SINE MIR -19 243 15 363 304 120 28 chr2 159585609 159585826 -93670757 - MIR SINE MIR -2 260 24 278 319 115 87 chr2 159586022 159586853 -93669730 + L2 LINE L2 2420 3272 0 570 191 38 23 chr2 159587447 159587578 -93669005 + FLAM_A SINE Alu 1 133 0 322 286 101 28 chr2 159588424 159588602 -93667981 - L1MC4a LINE L1 -1918 5890 5700 1385 374 63 24 chr2 159594156 159594976 -93661607 - L3 LINE CR1 -11 1566 715 246 267 200 17 chr2 159594969 159595089 -93661494 + MIR SINE MIR 107 248 -14 * 180 255 20 0 chr2 159595665 159595716 -93660867 + MIR SINE MIR 78 129 -133 197 349 48 0 chr2 159596149 159596212 -93660371 - L2 LINE L2 -9 3263 3198 289 253 42 63 chr2 159598190 159598285 -93658298 + MIR SINE MIR 32 124 -84 532 265 247 62 chr2 159598502 159598842 -93657741 + MLT1K LTR MaLR 184 586 -2 2637 60 0 12 chr2 159600990 159601309 -93655274 + L1PA7 LINE L1 5838 6152 -2 26 0 0 0 chr2 159601463 159601489 -93655094 + AT_rich Low_complexity Low_complexity 1 26 0 321 135 0 0 chr2 159607446 159607498 -93649085 + (GGAA)n Simple_repeat Simple_repeat 2 53 0 205 296 42 0 chr2 159607996 159608067 -93648516 + CT-rich Low_complexity Low_complexity 2 75 0 923 123 55 0 chr2 159608125 159608271 -93648312 + L1MA6 LINE L1 6147 6300 0 21 36 0 0 chr2 159610027 159610055 -93646528 + AT_rich Low_complexity Low_complexity 1 28 0 442 236 92 72 chr2 159610515 159610568 -93646015 + MIR SINE MIR 46 96 -166 2106 127 3 3 chr2 159610568 159610875 -93645708 - AluSx SINE Alu -5 307 1 442 236 92 72 chr2 159610875 159611016 -93645567 + MIR SINE MIR 96 244 -18 3808 143 38 23 chr2 159611191 159611513 -93645070 + L1MB4 LINE L1 5505 5821 -359 2345 97 7 0 chr2 159611513 159611821 -93644762 - AluSp SINE Alu -3 310 1 3808 143 38 23 chr2 159611821 159612162 -93644421 + L1MB4 LINE L1 5821 6178 -2 385 318 98 25 chr2 159612320 159612719 -93643864 - L1ME4a LINE L1 -194 5927 5500 671 273 23 11 chr2 159612722 159612898 -93643685 + MER5B DNA MER1_type 1 178 0 1932 138 23 13 chr2 159613726 159614031 -93642552 + AluJo SINE Alu 1 308 -4 2119 120 17 3 chr2 159614040 159614340 -93642243 - AluSg SINE Alu -6 304 1 395 316 138 37 chr2 159615561 159615858 -93640725 - L2 LINE L2 -4 3268 2942 304 292 22 36 chr2 159615938 159616075 -93640508 - L2 LINE L2 -493 2821 2687 688 205 105 124 chr2 159616850 159617099 -93639484 + MLT1A1 LTR MaLR 1 242 -123 1830 147 7 14 chr2 159617099 159617385 -93639198 + L1PB4 LINE L1 5865 6148 -8 688 205 105 124 chr2 159617385 159617505 -93639078 + MLT1A1 LTR MaLR 242 363 -2 595 196 31 0 chr2 159617989 159618086 -93638497 + FRAM SINE Alu 46 145 -31 318 26 0 0 chr2 159618087 159618126 -93638457 + (CA)n Simple_repeat Simple_repeat 2 40 0 1263 178 5 0 chr2 159618477 159618691 -93637892 - AluSg/x SINE Alu -2 310 96 2257 120 0 0 chr2 159618784 159619084 -93637499 + AluSx SINE Alu 1 300 -12 1963 121 11 0 chr2 159619701 159620024 -93636559 - AluSx SINE Alu 0 326 1 2570 247 92 33 chr2 159620805 159621947 -93634636 + L1ME2 LINE L1 2635 3843 -2303 597 231 25 0 chr2 159621968 159622089 -93634494 - MSTB LTR MaLR 0 426 303 1852 240 65 83 chr2 159622143 159623380 -93633203 + L1ME2 LINE L1 4386 5603 -561 288 119 0 51 chr2 159623380 159623467 -93633116 + Alu SINE Alu 247 302 0 1852 240 65 83 chr2 159623467 159623957 -93632626 + L1ME2 LINE L1 5603 6100 -64 2218 125 0 25 chr2 159624810 159625130 -93631453 + AluSx SINE Alu 1 312 0 303 271 56 42 chr2 159625150 159625294 -93631289 - MER103 DNA DNA -20 146 1 2535 83 0 0 chr2 159625631 159625943 -93630640 - AluSx SINE Alu 0 312 1 6611 183 188 33 chr2 159626366 159626957 -93629626 - MER52A LTR ERV1 0 1755 1257 2254 63 7 17 chr2 159626957 159627256 -93629327 - AluY SINE Alu -15 296 1 6611 183 188 33 chr2 159627256 159628184 -93628399 - MER52A LTR ERV1 -498 1257 1 2066 200 14 13 chr2 159628185 159628777 -93627806 - MER52A-int LTR ERV1 -4 6992 3684 * 2960 131 27 56 chr2 159628774 159629407 -93627176 - MER52A-int LTR ERV1 -2251 5565 2226 2125 139 0 0 chr2 159629428 159629737 -93626846 - AluSx SINE Alu -3 309 1 2099 121 9 9 chr2 159629738 159630053 -93626530 - MER52A-int LTR ERV1 -3742 2204 1890 492 148 52 9 chr2 159630052 159630155 -93626428 - MER41-int LTR ERV1 -305 4912 1057 * 24 0 0 0 chr2 159630175 159630199 -93626384 + AT_rich Low_complexity Low_complexity 1 24 0 14046 175 36 15 chr2 159630199 159631537 -93625046 - L1PB1 LINE L1 -2 6865 5557 2009 139 0 26 chr2 159631537 159631846 -93624737 - AluSx SINE Alu -11 301 1 14046 175 36 15 chr2 159631846 159635376 -93621207 - L1PB1 LINE L1 -1310 5557 1705 2064 144 3 0 chr2 159635376 159635682 -93620901 - AluSc SINE Alu 0 309 3 14046 175 36 15 chr2 159635682 159636792 -93619791 - L1PB1 LINE L1 -5162 1705 620 1147 157 10 0 chr2 159636772 159636970 -93619613 - L1PB1 LINE L1 -6663 200 1 * 387 118 26 53 chr2 159636985 159637061 -93619522 - MER61-int LTR ERV1 -4883 1063 990 607 176 0 32 chr2 159637118 159637243 -93619340 - MER61-int LTR ERV1 -463 4754 4634 687 220 306 0 chr2 159637244 159637535 -93619048 - MER52A LTR ERV1 -1375 380 1 21 36 0 0 chr2 159637574 159637602 -93618981 + AT_rich Low_complexity Low_complexity 1 28 0 345 305 183 0 chr2 159638455 159638586 -93617997 - L2 LINE L2 0 3313 3159 554 204 21 120 chr2 159638652 159638843 -93617740 - MER5B DNA MER1_type 0 178 7 2860 272 105 65 chr2 159638859 159640509 -93616074 - L2 LINE L2 -1208 2106 391 906 276 51 28 chr2 159640563 159640817 -93615766 + MIR SINE MIR 2 261 -1 183 80 0 0 chr2 159640862 159640887 -93615696 + (TTA)n Simple_repeat Simple_repeat 1 25 0 294 167 13 26 chr2 159641155 159641233 -93615350 + L1MC4a LINE L1 6927 7003 -805 388 294 95 29 chr2 159642222 159642528 -93614055 - L1MEd LINE L1 -5012 1107 782 272 282 84 75 chr2 159643268 159643495 -93613088 + L2 LINE L2 2737 2965 -349 352 347 117 75 chr2 159643574 159643986 -93612597 - L2 LINE L2 -2 3270 2842 312 279 93 16 chr2 159644076 159644205 -93612378 - L2 LINE L2 -602 2712 2574 286 286 81 61 chr2 159644525 159644822 -93611761 - L2 LINE L2 -1761 1553 1251 26 0 0 0 chr2 159649760 159649786 -93606797 + AT_rich Low_complexity Low_complexity 1 26 0 2465 60 0 12 chr2 159649940 159650259 -93606324 - L1PA7 LINE L1 -2 6152 5838 519 265 247 62 chr2 159652407 159652747 -93603836 - MLT1K LTR MaLR -2 586 184 286 253 42 63 chr2 159652964 159653059 -93603524 - MIR SINE MIR -84 124 32 197 349 48 0 chr2 159655037 159655100 -93601483 + L2 LINE L2 3198 3263 -9 180 255 20 0 chr2 159655533 159655584 -93600999 - MIR SINE MIR -133 129 78 246 267 200 17 chr2 159656160 159656280 -93600303 - MIR SINE MIR -14 248 107 * 1385 374 63 24 chr2 159656273 159657093 -93599490 + L3 LINE CR1 715 1566 -11 322 286 101 28 chr2 159662648 159662826 -93593757 + L1MC4a LINE L1 5700 5890 -1918 570 191 38 23 chr2 159663672 159663803 -93592780 - FLAM_A SINE Alu 0 133 1 276 318 117 87 chr2 159664397 159665226 -93591357 - L2 LINE L2 0 3272 2420 363 304 120 28 chr2 159665422 159665639 -93590944 + MIR SINE MIR 24 260 -2 782 276 60 5 chr2 159666307 159666524 -93590059 + MIR SINE MIR 15 243 -19 1312 233 176 99 chr2 159666852 159667651 -93588932 + LTR28 LTR ERV1 1 982 -38 468 263 0 17 chr2 159667693 159667811 -93588772 + LTR28 LTR ERV1 905 1020 0 473 329 12 6 chr2 159668557 159668724 -93587859 - L2 LINE L2 -898 2416 2249 5027 143 15 4 chr2 159668872 159670523 -93586060 - L1PA16 LINE L1 -9 6157 4480 1236 153 16 0 chr2 159670642 159670832 -93585751 - AluSg/x SINE Alu -13 299 107 23 92 0 0 chr2 159671967 159672032 -93584551 + AT_rich Low_complexity Low_complexity 1 65 0 550 254 84 75 chr2 159673097 159673151 -93583432 - LTR33A LTR ERVL -36 487 435 1262 162 28 114 chr2 159673151 159673547 -93583036 + MLT1A1 LTR MaLR 4 365 0 550 254 84 75 chr2 159673547 159673839 -93582744 - LTR33A LTR ERVL -88 435 138 989 165 11 16 chr2 159673863 159674045 -93582538 - MLT1A2 LTR MaLR -5 369 189 300 209 0 0 chr2 159674066 159674157 -93582426 + GA-rich Low_complexity Low_complexity 1 91 0 884 196 17 17 chr2 159674168 159674341 -93582242 - MLT1A2 LTR MaLR -201 173 1 227 283 0 0 chr2 159675907 159675953 -93580630 - L2 LINE L2 -16 3297 3252 348 267 0 0 chr2 159676344 159676419 -93580164 + MER112 DNA MER1_type 178 252 -8 271 333 237 5 chr2 159676606 159676804 -93579779 + MIR SINE MIR 3 246 -16 266 278 41 10 chr2 159677247 159677344 -93579239 - L1M4 LINE L1 -2018 4128 4029 1825 161 3 3 chr2 159677462 159677748 -93578835 + AluJb SINE Alu 4 289 -23 29 28 0 0 chr2 159677770 159677806 -93578777 + AT_rich Low_complexity Low_complexity 1 36 0 1337 263 111 11 chr2 159677961 159678486 -93578097 + L1ME1 LINE L1 5372 5948 -218 198 103 0 0 chr2 159678756 159678785 -93577798 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 234 156 0 0 chr2 159678893 159678938 -93577645 + (TAGG)n Simple_repeat Simple_repeat 1 45 0 443 195 31 0 chr2 159678955 159679083 -93577500 + (TAGA)n Simple_repeat Simple_repeat 3 134 0 2140 118 14 0 chr2 159679207 159679496 -93577087 - AluSq SINE Alu -20 293 1 5808 124 4 2 chr2 159679688 159680520 -93576063 + L1PA7 LINE L1 64 896 -5565 12863 106 18 1 chr2 159680520 159683158 -93573425 + L1PA7 LINE L1 3790 6453 -16 43384 43 3 1 chr2 159683178 159689305 -93567278 + L1PA4 LINE L1 10 6152 -3 239 246 18 0 chr2 159690111 159690168 -93566415 + (TG)n Simple_repeat Simple_repeat 2 59 0 2401 86 7 0 chr2 159691966 159692267 -93564316 - AluSg SINE Alu -7 303 1 258 32 0 0 chr2 159692581 159692612 -93563971 + (TC)n Simple_repeat Simple_repeat 2 32 0 22 35 0 0 chr2 159693448 159693477 -93563106 + AT_rich Low_complexity Low_complexity 1 29 0 1818 166 43 38 chr2 159694574 159694947 -93561636 + MSTB LTR MaLR 1 375 -51 211 294 99 70 chr2 159695172 159695373 -93561210 - L2 LINE L2 -12 3301 3095 23 0 0 0 chr2 159697347 159697370 -93559213 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr2 159697800 159697825 -93558758 + AT_rich Low_complexity Low_complexity 1 25 0 500 290 99 45 chr2 159698090 159698725 -93557858 - L1ME3A LINE L1 -238 5932 5264 458 309 171 11 chr2 159699122 159699876 -93556707 - L1ME3A LINE L1 -1387 4759 3885 21 36 0 0 chr2 159700026 159700054 -93556529 + AT_rich Low_complexity Low_complexity 1 28 0 213 237 17 0 chr2 159700237 159700296 -93556287 + (TTG)n Simple_repeat Simple_repeat 3 62 0 22 56 0 0 chr2 159700398 159700434 -93556149 + AT_rich Low_complexity Low_complexity 1 36 0 376 276 28 63 chr2 159700483 159700576 -93556007 - L1ME3A LINE L1 -2887 3259 3164 844 173 56 0 chr2 159700576 159700755 -93555828 - L1MB1 LINE L1 0 6168 5980 376 276 28 63 chr2 159700755 159701056 -93555527 - L1ME3A LINE L1 -2982 3164 2879 22 0 0 0 chr2 159702641 159702663 -93553920 + AT_rich Low_complexity Low_complexity 1 22 0 467 155 10 29 chr2 159702856 159702959 -93553624 - L1MB4 LINE L1 -1 6179 6079 279 264 58 43 chr2 159703000 159703277 -93553306 - L1ME3A LINE L1 -3719 2427 2147 1345 198 134 51 chr2 159703294 159703743 -93552840 - L1MD2 LINE L1 -15 6344 5849 2342 104 59 0 chr2 159703743 159704097 -93552486 + THE1C LTR MaLR 1 375 0 1345 198 134 51 chr2 159704097 159704138 -93552445 - L1MD2 LINE L1 -510 5849 5813 965 158 0 0 chr2 159704277 159704429 -93552154 - AluJb SINE Alu -26 286 135 1016 204 15 58 chr2 159704429 159704703 -93551880 + L2 LINE L2 1819 2080 -1234 1633 201 61 6 chr2 159704703 159705131 -93551452 - MLT1D LTR MaLR 0 505 1 1815 294 74 55 chr2 159705132 159706186 -93550397 + L2 LINE L2 2077 3152 -161 244 203 31 16 chr2 159706224 159706288 -93550295 + MER69 DNA AcHobo 2453 2517 -9 511 250 34 14 chr2 159706292 159706440 -93550143 + L2 LINE L2 3163 3313 0 386 316 81 42 chr2 159707250 159707535 -93549048 - L1ME4a LINE L1 -1 6120 5825 2371 72 7 13 chr2 159708748 159709054 -93547529 - AluSx SINE Alu -8 304 1 6140 183 188 33 chr2 159709477 159710068 -93546515 - MER52A LTR ERV1 0 1755 1257 2253 60 7 17 chr2 159710068 159710367 -93546216 - AluY SINE Alu -15 296 1 6140 183 188 33 chr2 159710367 159711295 -93545288 - MER52A LTR ERV1 -498 1257 1 1481 139 71 7 chr2 159711296 159711577 -93545006 - MER52A-int LTR ERV1 -1 5216 4918 1909 143 7 0 chr2 159711580 159711888 -93544695 - MER52A-int LTR ERV1 -1224 3993 3684 * 2755 135 30 38 chr2 159711885 159712506 -93544077 - MER52A-int LTR ERV1 -2279 5537 2226 2168 136 0 0 chr2 159712527 159712836 -93543747 - AluSx SINE Alu -3 309 1 1934 121 9 9 chr2 159712837 159713152 -93543431 - MER52A-int LTR ERV1 -3742 2204 1890 454 136 49 0 chr2 159713161 159713242 -93543341 - MER52A-int LTR ERV1 -4805 1141 1057 23 0 0 0 chr2 159713244 159713267 -93543316 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr2 159713274 159713298 -93543285 + AT_rich Low_complexity Low_complexity 1 24 0 12490 174 35 18 chr2 159713298 159714656 -93541927 - L1PB1 LINE L1 -2 6865 5533 2014 149 0 0 chr2 159714656 159714945 -93541638 - AluSx SINE Alu -23 289 1 12490 174 35 18 chr2 159714945 159718475 -93538108 - L1PB1 LINE L1 -1334 5533 1703 2082 144 3 0 chr2 159718475 159718781 -93537802 - AluSc SINE Alu 0 309 3 12490 174 35 18 chr2 159718781 159719868 -93536715 - L1PB1 LINE L1 -5164 1703 637 1079 152 10 0 chr2 159719871 159720069 -93536514 - L1PB1 LINE L1 -6663 200 1 355 118 26 53 chr2 159720084 159720160 -93536423 - MER61-int LTR ERV1 -4883 1063 990 569 168 0 32 chr2 159720217 159720342 -93536241 - MER61-int LTR ERV1 -463 4754 4634 728 207 13 32 chr2 159720343 159720644 -93535939 - MER52A LTR ERV1 -1375 380 1 21 36 0 0 chr2 159720683 159720711 -93535872 + AT_rich Low_complexity Low_complexity 1 28 0 351 305 183 0 chr2 159721564 159721695 -93534888 - L2 LINE L2 0 3313 3159 557 204 21 120 chr2 159721761 159721952 -93534631 - MER5B DNA MER1_type 0 178 7 2915 273 104 64 chr2 159721958 159723619 -93532964 - L2 LINE L2 -1197 2117 391 920 276 51 28 chr2 159723673 159723927 -93532656 + MIR SINE MIR 2 261 -1 321 156 13 13 chr2 159724263 159724340 -93532243 + L1MD3 LINE L1 6982 7058 -937 401 294 95 29 chr2 159725329 159725635 -93530948 - L1MEd LINE L1 -5012 1107 782 269 300 62 53 chr2 159726375 159726602 -93529981 + L2 LINE L2 2737 2965 -349 381 340 117 75 chr2 159726681 159727093 -93529490 - L2 LINE L2 -2 3270 2842 325 271 93 16 chr2 159727183 159727312 -93529271 - L2 LINE L2 -602 2712 2574 269 291 87 51 chr2 159727632 159727907 -93528676 - L2 LINE L2 -1761 1553 1269 2161 238 46 11 chr2 159728570 159729226 -93527357 + L1MC4a LINE L1 6717 7395 -413 186 326 130 14 chr2 159729443 159729581 -93527002 + L2 LINE L2 3117 3270 -43 250 304 52 52 chr2 159729696 159729811 -93526772 + MIR SINE MIR 38 152 -56 24 0 0 0 chr2 159729836 159729860 -93526723 + AT_rich Low_complexity Low_complexity 1 24 0 5237 201 53 34 chr2 159732573 159733269 -93523314 - L1MC1 LINE L1 0 6613 5931 1991 117 4 4 chr2 159733269 159733550 -93523033 + AluSg SINE Alu 17 297 -13 5237 201 53 34 chr2 159733550 159735536 -93521047 - L1MC1 LINE L1 -682 5931 3879 18859 177 31 10 chr2 159735539 159736633 -93519950 + L1M1 LINE L1 19 1089 -6476 1355 182 165 14 chr2 159736633 159736924 -93519659 + MER1B DNA MER1_type 3 337 0 18859 177 31 10 chr2 159736924 159742340 -93514243 + L1M1 LINE L1 1089 6662 -903 2260 143 85 10 chr2 159742340 159742738 -93513845 - MSTA LTR MaLR 0 428 1 6390 191 59 9 chr2 159742743 159744087 -93512496 - MSTA-int LTR MaLR -14 1637 227 811 139 28 0 chr2 159744071 159744215 -93512368 + L1MA2 LINE L1 6113 6260 -44 * 3833 157 68 62 chr2 159744245 159744456 -93512127 - L1MC1 LINE L1 -4847 1579 1371 2058 126 10 0 chr2 159744456 159744750 -93511833 - AluSq SINE Alu -16 297 1 3833 157 68 62 chr2 159744750 159745104 -93511479 - L1MC1 LINE L1 -5055 1371 1021 839 112 0 15 chr2 159745104 159745238 -93511345 - FLAM_C SINE Alu 0 133 2 3833 157 68 62 chr2 159745238 159745712 -93510871 - L1MC1 LINE L1 -5405 1021 533 2938 63 2 7 chr2 159745736 159746150 -93510433 - LTR7 LTR ERV1 -38 412 1 2296 89 45 21 chr2 159746150 159746531 -93510052 - HERVH LTR ERV1 0 7713 7324 1353 115 18 9 chr2 159746531 159746749 -93509834 - HERVH LTR ERV1 -1894 5819 5600 2835 165 0 2 chr2 159746750 159747236 -93509347 - HERVH LTR ERV1 -2564 5149 4665 1925 225 56 33 chr2 159747236 159747751 -93508832 - L1MC1 LINE L1 -5878 548 22 205 266 248 9 chr2 159747844 159747957 -93508626 - L2 LINE L2 0 3313 3174 245 384 35 17 chr2 159748190 159748362 -93508221 - L2 LINE L2 -211 3061 2887 238 148 262 0 chr2 159748712 159748773 -93507810 + MER39B LTR ERV1 1 77 -576 2362 138 8 0 chr2 159748774 159749143 -93507440 + THE1C LTR MaLR 4 375 0 2299 116 30 0 chr2 159749144 159749507 -93507076 + THE1C-int LTR MaLR 2 375 -1205 330 167 0 0 chr2 159749507 159749591 -93506992 + T-rich Low_complexity Low_complexity 1 84 0 374 0 22 0 chr2 159749558 159749604 -93506979 + (TTTTA)n Simple_repeat Simple_repeat 4 50 0 7546 14 0 0 chr2 159749592 159750493 -93506090 - L1PA2 LINE L1 -1 6154 5254 7840 12 0 0 chr2 159749604 159751062 -93505521 - L1PA2 LINE L1 -13 6142 4685 7800 127 43 6 chr2 159751062 159752242 -93504341 + THE1C-int LTR MaLR 357 1580 0 2453 121 5 5 chr2 159752242 159752614 -93503969 + THE1C LTR MaLR 1 372 -3 3340 148 22 16 chr2 159752617 159753196 -93503387 + MER39B LTR ERV1 71 653 0 2121 115 0 7 chr2 159753233 159753564 -93503019 + AluSq SINE Alu 1 329 0 2217 164 55 7 chr2 159753583 159753998 -93502585 - MER31A LTR ERV1 -50 435 1 198 250 16 16 chr2 159754396 159754460 -93502123 - L2 LINE L2 -1197 2117 2054 24 0 0 0 chr2 159754612 159754636 -93501947 + AT_rich Low_complexity Low_complexity 1 24 0 684 273 137 52 chr2 159756267 159756728 -93499855 - MLT1J LTR MaLR -8 503 4 244 319 0 14 chr2 159756792 159756861 -93499722 + MER45C DNA AcHobo 221 288 -665 242 196 179 0 chr2 159756985 159757041 -93499542 + MER45C DNA AcHobo 483 548 -405 1066 225 47 31 chr2 159757304 159757624 -93498959 + MER45B DNA AcHobo 716 1040 0 321 270 113 9 chr2 159758735 159758850 -93497733 - L2 LINE L2 0 3313 3187 465 331 66 29 chr2 159758962 159759204 -93497379 + MIR SINE MIR 2 252 -10 514 232 155 32 chr2 159759328 159759483 -93497100 - MER5A DNA MER1_type 0 189 16 2680 178 44 0 chr2 159759949 159760450 -93496133 + L1MB7 LINE L1 5620 6142 -42 574 263 100 11 chr2 159760580 159760783 -93495800 + MLT1H LTR MaLR 4 266 -283 335 265 53 8 chr2 159760860 159760968 -93495615 + MLT1H LTR MaLR 435 534 -15 1883 148 17 3 chr2 159761437 159761728 -93494855 - AluSx SINE Alu -15 297 3 604 242 143 6 chr2 159761998 159762180 -93494403 - L2 LINE L2 0 3313 3107 490 333 108 24 chr2 159762224 159762521 -93494062 - LTR16A LTR ERVL -128 322 1 3468 256 99 47 chr2 159762521 159763901 -93492682 - L2 LINE L2 -560 2754 1304 2178 138 3 15 chr2 159763901 159764241 -93492342 - MER1B DNA MER1_type 0 337 2 1029 278 233 25 chr2 159764264 159764427 -93492156 - L2 LINE L2 -2380 934 806 1758 134 14 22 chr2 159764427 159764703 -93491880 + AluJb SINE Alu 13 286 -26 1029 278 233 25 chr2 159764703 159765218 -93491365 - L2 LINE L2 -2508 806 115 2077 63 0 63 chr2 159765261 159765548 -93491035 + AluY SINE Alu 30 298 -13 276 77 0 0 chr2 159765848 159765887 -93490696 + (TG)n Simple_repeat Simple_repeat 2 40 0 395 237 88 9 chr2 159766122 159766236 -93490347 + L2 LINE L2 3190 3312 -1 2801 10 0 0 chr2 159766388 159766691 -93489892 - AluY SINE Alu -8 303 1 23 33 0 0 chr2 159766703 159766733 -93489850 + AT_rich Low_complexity Low_complexity 1 30 0 724 281 105 5 chr2 159766747 159766957 -93489626 - MIR SINE MIR -30 232 2 228 223 48 97 chr2 159767819 159767922 -93488661 - MER102b DNA MER1_type -10 331 234 270 291 73 77 chr2 159767992 159768239 -93488344 + L2 LINE L2 2145 2390 -924 1986 148 48 15 chr2 159768252 159768589 -93487994 + MER7A DNA MER2_type 1 346 0 377 317 79 71 chr2 159768608 159769128 -93487455 + L2 LINE L2 2454 2977 -337 973 231 91 127 chr2 159770255 159771460 -93485123 - L1MC5 LINE L1 -181 7780 6620 319 333 40 4 chr2 159771625 159771853 -93484730 - L1M4 LINE L1 -1088 5058 4823 304 373 73 28 chr2 159772122 159772472 -93484111 - L1M4 LINE L1 -1617 4529 4196 2052 154 6 19 chr2 159772472 159772836 -93483747 - MER46B DNA MER2_type 0 236 3 266 0 29 0 chr2 159772836 159772870 -93483713 + (TG)n Simple_repeat Simple_repeat 2 36 0 304 373 73 28 chr2 159772870 159773012 -93483571 - L1M4 LINE L1 -1949 4197 4014 302 67 22 0 chr2 159773210 159773255 -93483328 + (TC)n Simple_repeat Simple_repeat 1 46 0 416 99 14 0 chr2 159773255 159773326 -93483257 + (TG)n Simple_repeat Simple_repeat 1 72 0 353 186 0 23 chr2 159773331 159773417 -93483166 - L1MC4 LINE L1 -129 7913 7830 229 215 127 0 chr2 159774028 159774107 -93482476 - HAL1b LINE L1 -968 380 292 25 0 0 0 chr2 159775381 159775406 -93481177 + AT_rich Low_complexity Low_complexity 1 25 0 955 276 173 12 chr2 159776003 159776408 -93480175 + MLT1E LTR MaLR 124 593 0 194 152 0 22 chr2 159776665 159776711 -93479872 + (TG)n Simple_repeat Simple_repeat 2 46 0 1087 209 5 0 chr2 159776731 159776932 -93479651 - MER6B DNA MER2_type -7 203 2 2493 69 0 0 chr2 159777543 159777848 -93478735 - AluY SINE Alu -6 305 1 288 323 90 30 chr2 159777856 159777989 -93478594 - MIR SINE MIR -120 142 2 473 300 8 0 chr2 159778068 159778198 -93478385 - MIR SINE MIR -82 180 50 800 215 25 0 chr2 159779413 159779576 -93477007 - AluJb SINE Alu -9 303 137 1261 291 125 41 chr2 159779822 159780715 -93475868 - L1ME3A LINE L1 -13 6157 5188 2700 129 5 14 chr2 159780738 159781180 -93475403 - L1MA1 LINE L1 0 6302 5865 16148 195 35 17 chr2 159781180 159788039 -93468544 - L1M1 LINE L1 -705 7019 19 33 80 0 0 chr2 159788985 159789060 -93467523 + AT_rich Low_complexity Low_complexity 1 75 0 26 0 0 0 chr2 159789110 159789136 -93467447 + AT_rich Low_complexity Low_complexity 1 26 0 31 26 0 0 chr2 159790686 159790724 -93465859 + AT_rich Low_complexity Low_complexity 1 38 0 2030 155 12 6 chr2 159790831 159791166 -93465417 + MER1B DNA MER1_type 1 337 0 21 0 0 0 chr2 159792687 159792708 -93463875 + AT_rich Low_complexity Low_complexity 1 21 0 7385 245 54 55 chr2 159793210 159796662 -93459921 + L1PB4 LINE L1 174 3622 -3226 1929 157 3 7 chr2 159796662 159796962 -93459621 + AluSx SINE Alu 1 299 -13 7385 245 54 55 chr2 159796962 159797063 -93459520 + L1PB4 LINE L1 3622 3722 -3126 2168 126 48 25 chr2 159797063 159797419 -93459164 - THE1B LTR MaLR 0 364 1 4547 77 2 0 chr2 159797419 159797988 -93458595 - THE1B-int LTR MaLR 0 1580 1011 1781 209 0 9 chr2 159798091 159798440 -93458143 + MER52A LTR ERV1 1410 1755 0 2306 84 3 10 chr2 159798879 159799188 -93457395 + AluSx SINE Alu 6 312 0 4437 86 17 33 chr2 159799298 159799584 -93456999 - THE1B-int LTR MaLR -931 649 360 1549 103 119 12 chr2 159799584 159799859 -93456724 + AluSp SINE Alu 5 306 0 4437 86 17 33 chr2 159799859 159800231 -93456352 - THE1B-int LTR MaLR -1220 360 1 2077 129 33 41 chr2 159800233 159800598 -93455985 - THE1B LTR MaLR -2 362 1 6942 206 44 11 chr2 159800598 159803388 -93453195 + L1PB4 LINE L1 3718 6685 -173 2618 223 86 30 chr2 159803389 159804231 -93452352 + L1PBa LINE L1 128 1016 -5847 22 0 0 0 chr2 159804758 159804780 -93451803 + AT_rich Low_complexity Low_complexity 1 22 0 354 356 109 32 chr2 159804942 159805346 -93451237 + L2 LINE L2 1854 2288 -1026 435 281 14 7 chr2 159805553 159805692 -93450891 + HAL1b LINE L1 550 689 -659 762 299 107 51 chr2 159806614 159807139 -93449444 - MLT1G1 LTR MaLR -40 555 2 324 267 113 47 chr2 159807238 159807388 -93449195 + L1M4 LINE L1 4500 4659 -1487 206 277 0 0 chr2 159807459 159807506 -93449077 + (TA)n Simple_repeat Simple_repeat 1 47 0 805 231 12 0 chr2 159807851 159808024 -93448559 - MER45A DNA AcHobo -3 175 1 2050 178 118 6 chr2 159808054 159808754 -93447829 + L1M4 LINE L1 4858 5612 -572 1094 300 92 18 chr2 159808811 159809378 -93447205 + L2 LINE L2 2703 3312 -1 910 198 6 81 chr2 159809885 159810208 -93446375 - L1MA4 LINE L1 -90 6210 5912 219 378 27 0 chr2 159810255 159810329 -93446254 - MIR SINE MIR -166 96 21 640 209 77 41 chr2 159811378 159811574 -93445009 + MER105 DNA DNA 1 203 -1 1047 301 73 54 chr2 159812934 159813646 -93442937 - L2 LINE L2 -1 3312 2584 599 312 163 0 chr2 159813809 159814030 -93442553 + MLT1J LTR MaLR 79 335 -176 274 367 92 0 chr2 159815535 159815633 -93440950 - L2 LINE L2 -16 3256 3150 324 397 37 0 chr2 159815637 159815773 -93440810 - MIR3 SINE MIR -40 168 28 264 276 0 0 chr2 159816884 159816989 -93439594 + (TA)n Simple_repeat Simple_repeat 1 105 0 1335 126 70 0 chr2 159817112 159817326 -93439257 - MER30 DNA MER1_type -1 229 1 257 270 81 0 chr2 159818013 159818087 -93438496 - L2 LINE L2 -16 3297 3218 239 186 38 27 chr2 159819330 159819596 -93436987 + (TA)n Simple_repeat Simple_repeat 1 269 0 1660 192 7 0 chr2 159819630 159819809 -93436774 - AluJb SINE Alu 0 312 129 219 36 0 0 chr2 159819809 159819837 -93436746 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1660 192 7 0 chr2 159819837 159819965 -93436618 - AluJb SINE Alu -183 129 3 361 291 56 58 chr2 159820987 159821131 -93435452 + L1MDa LINE L1 2444 2587 -3953 2086 110 20 3 chr2 159821131 159821431 -93435152 + AluSx SINE Alu 1 305 -7 361 291 56 58 chr2 159821431 159821631 -93434952 + L1MDa LINE L1 2587 2791 -3749 318 326 45 54 chr2 159821672 159821914 -93434669 + L1M4 LINE L1 4759 4998 -1148 232 258 90 11 chr2 159821998 159822087 -93434496 - MIR SINE MIR -145 117 22 1782 152 26 10 chr2 159822098 159822400 -93434183 - AluSx SINE Alu -5 307 1 3552 59 0 0 chr2 159822426 159822883 -93433700 - L1PA8 LINE L1 0 6172 5716 1875 119 11 25 chr2 159822884 159823203 -93433380 + L1MC/D LINE L1 5450 5764 -453 388 266 49 35 chr2 159823733 159823876 -93432707 + MLT1L LTR MaLR 471 615 0 1561 27 0 0 chr2 159824389 159824575 -93432008 - L1PA5 LINE L1 -177 5977 5792 1459 58 5 0 chr2 159824575 159824762 -93431821 + L1PA5 LINE L1 5965 6154 0 23 33 0 0 chr2 159824931 159824961 -93431622 + AT_rich Low_complexity Low_complexity 1 30 0 239 222 19 0 chr2 159824983 159825037 -93431546 + MIR SINE MIR 135 189 -73 187 186 0 29 chr2 159825089 159825159 -93431424 + (TTA)n Simple_repeat Simple_repeat 3 70 0 13832 158 23 43 chr2 159825479 159830863 -93425720 - L1MA1 LINE L1 0 7721 2472 2002 161 0 0 chr2 159830863 159831161 -93425422 - AluSx SINE Alu -14 298 1 13832 158 23 43 chr2 159831161 159831865 -93424718 - L1MA1 LINE L1 -5249 2472 1756 243 309 64 0 chr2 159831895 159832005 -93424578 - MARNA DNA Mariner -38 548 432 2605 220 16 2 chr2 159832103 159832613 -93423970 - L1M1 LINE L1 -5861 1704 1188 339 316 148 29 chr2 159832667 159832945 -93423638 - MARNA DNA Mariner -254 332 22 22 0 0 0 chr2 159832989 159833011 -93423572 + AT_rich Low_complexity Low_complexity 1 22 0 256 254 76 85 chr2 159833945 159834063 -93422520 + MIR SINE MIR 50 148 -60 24 0 0 0 chr2 159834394 159834418 -93422165 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr2 159834500 159834524 -93422059 + AT_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr2 159835530 159835550 -93421033 + (T)n Simple_repeat Simple_repeat 1 20 0 298 98 0 0 chr2 159837297 159837338 -93419245 + L2 LINE L2 3265 3305 -8 358 293 5 2 chr2 159837418 159837602 -93418981 + MER58 DNA MER1_type 1 2420 0 966 289 26 32 chr2 159837716 159838093 -93418490 + MLT1L LTR MaLR 231 605 -10 559 101 0 0 chr2 159838322 159838401 -93418182 - MADE1 DNA Mariner -1 79 1 11913 36 4 1 chr2 159838503 159839961 -93416622 - L1PA3 LINE L1 -1408 4738 3277 7555 32 0 0 chr2 159839968 159841397 -93415186 + L1PA3 LINE L1 4723 6152 -3 33 0 0 0 chr2 159841397 159841430 -93415153 + AT_rich Low_complexity Low_complexity 1 33 0 387 54 0 0 chr2 159841430 159841486 -93415097 + L1P LINE L1 4980 5035 -1111 243 0 0 0 chr2 159841501 159841528 -93415055 + (TA)n Simple_repeat Simple_repeat 1 27 0 6725 60 11 0 chr2 159841630 159842731 -93413852 - L1PA5 LINE L1 -16 6138 5034 2435 177 28 72 chr2 159842994 159843535 -93413048 - L1MC2 LINE L1 -3 6341 5831 1903 137 0 27 chr2 159843535 159843863 -93412720 - AluSq SINE Alu 0 321 2 2435 177 28 72 chr2 159843863 159843971 -93412612 - L1MC2 LINE L1 -513 5831 5720 2459 85 0 0 chr2 159845346 159845652 -93410931 - AluSg SINE Alu -4 306 1 185 368 39 65 chr2 159845655 159845810 -93410773 - MIR SINE MIR -10 252 102 238 75 0 0 chr2 159846193 159846233 -93410350 + LTR66 LTR ERVL 400 439 -171 210 143 0 0 chr2 159846233 159846268 -93410315 + (TA)n Simple_repeat Simple_repeat 1 35 0 425 342 133 10 chr2 159847577 159847878 -93408705 + L3b LINE CR1 1115 1452 -131 199 365 14 14 chr2 159848669 159848743 -93407840 + L2 LINE L2 3170 3243 -29 712 290 216 21 chr2 159848749 159849224 -93407359 - L2 LINE L2 -186 3127 2584 2614 316 134 15 chr2 159849283 159849625 -93406958 - L2 LINE L2 -1828 1486 1186 387 0 0 0 chr2 159849625 159849668 -93406915 + (TTTTG)n Simple_repeat Simple_repeat 1 43 0 2614 316 134 15 chr2 159849668 159850624 -93405959 - L2 LINE L2 -2128 1186 34 1596 183 10 14 chr2 159851080 159851370 -93405213 + AluJb SINE Alu 1 289 -23 26 50 0 0 chr2 159852314 159852354 -93404229 + AT_rich Low_complexity Low_complexity 1 40 0 668 291 140 45 chr2 159852927 159853675 -93402908 + L1M4 LINE L1 2218 3036 -3110 608 328 115 9 chr2 159853701 159854824 -93401759 + L1M4 LINE L1 3107 4348 -1798 28273 40 2 1 chr2 159857054 159861334 -93395249 - L1PA5 LINE L1 -9 6145 1860 290 133 22 0 chr2 159861332 159861377 -93395206 + L1P LINE L1 857 902 -5244 * 805 182 18 12 chr2 159861579 159861749 -93394834 + L1MB1 LINE L1 5996 6166 -2 22 0 0 0 chr2 159862788 159862810 -93393773 + AT_rich Low_complexity Low_complexity 1 22 0 2038 117 21 0 chr2 159862929 159863212 -93393371 + AluSx SINE Alu 10 298 -14 231 217 0 0 chr2 159863545 159863605 -93392978 + (TA)n Simple_repeat Simple_repeat 2 61 0 732 308 98 11 chr2 159863717 159864003 -93392580 - LTR16A LTR ERVL 0 450 140 317 207 35 35 chr2 159864004 159864120 -93392463 + L1MC5 LINE L1 7649 7764 -197 264 245 0 0 chr2 159864135 159864198 -93392385 + L1MC4a LINE L1 6858 6911 -897 723 225 102 104 chr2 159864313 159865060 -93391523 + L1MC5 LINE L1 7001 7745 -216 247 231 77 0 chr2 159865152 159865217 -93391366 - MER2 DNA MER2_type -7 338 269 956 217 19 14 chr2 159865250 159865457 -93391126 - MER2 DNA MER2_type -136 209 2 322 272 104 32 chr2 159865482 159865607 -93390976 + L2 LINE L2 3179 3312 -1 187 380 25 0 chr2 159866727 159866806 -93389777 - L2 LINE L2 -8 3305 3225 282 193 0 0 chr2 159866899 159866956 -93389627 + (TG)n Simple_repeat Simple_repeat 1 57 0 204 364 91 27 chr2 159867019 159867129 -93389454 + L2 LINE L2 3148 3264 -8 518 290 21 38 chr2 159867975 159868161 -93388422 - MIR SINE MIR -21 241 59 253 278 78 94 chr2 159869321 159869512 -93387071 - Charlie8 DNA MER1_type -2228 189 2 355 127 0 18 chr2 159870316 159870371 -93386212 + MER66A LTR ERV1 285 338 -140 22 0 0 0 chr2 159870371 159870393 -93386190 + AT_rich Low_complexity Low_complexity 1 22 0 495 323 100 40 chr2 159870559 159871120 -93385463 - L2 LINE L2 -30 3283 2644 228 175 38 38 chr2 159871125 159871205 -93385378 + (TATAA)n Simple_repeat Simple_repeat 5 84 0 424 297 74 63 chr2 159871206 159871475 -93385108 - MLT1I LTR MaLR -40 369 98 304 333 46 0 chr2 159871689 159871797 -93384786 + MIR3 SINE MIR 47 159 -49 268 317 73 21 chr2 159872270 159872557 -93384026 - L1ME4a LINE L1 -202 5919 5618 1007 350 19 16 chr2 159872601 159873033 -93383550 + LTR16A LTR ERVL 17 449 -1 5016 124 76 17 chr2 159874523 159875383 -93381200 - MER11B LTR ERVK -326 910 1 372 215 259 24 chr2 159875383 159875579 -93381004 + MLT1G LTR MaLR 299 590 0 1184 259 51 6 chr2 159875627 159875982 -93380601 + ERVL LTR ERVL 4973 5343 -421 4874 239 64 12 chr2 159876216 159879045 -93377538 + L1PA13 LINE L1 105 3483 -3314 4097 253 12 21 chr2 159879065 159879985 -93376598 + L1PA13 LINE L1 1 912 -5875 623 137 0 0 chr2 159879984 159880079 -93376504 + L1PA15 LINE L1 6029 6123 -42 * 19617 131 7 38 chr2 159880179 159881147 -93375436 + L1P LINE L1 1867 2864 -3282 1550 101 18 5 chr2 159881147 159881366 -93375217 + AluSc SINE Alu 1 222 -87 19617 131 7 38 chr2 159881366 159883762 -93372821 + L1P LINE L1 2864 5126 -1020 436 165 0 0 chr2 159883895 159883980 -93372603 + L1PA15 LINE L1 6080 6164 -1 36005 77 8 75 chr2 159884017 159890079 -93366504 + L1P1 LINE L1 11 5656 -499 8966 120 9 17 chr2 159890180 159892343 -93364240 + L1PA8A LINE L1 3968 6131 0 1858 272 104 14 chr2 159892393 159893036 -93363547 - L2 LINE L2 -750 2564 1864 25 31 0 0 chr2 159893120 159893152 -93363431 + AT_rich Low_complexity Low_complexity 1 32 0 222 303 0 0 chr2 159893347 159893413 -93363170 + CT-rich Low_complexity Low_complexity 3 68 0 244 287 58 19 chr2 159893700 159893827 -93362756 + MIR3 SINE MIR 71 202 -6 214 287 181 0 chr2 159895067 159895161 -93361422 + MIR SINE MIR 53 163 -99 234 263 50 25 chr2 159895296 159895376 -93361207 - MLT1I LTR MaLR -27 568 487 505 189 54 54 chr2 159895556 159895704 -93360879 - MLT1H LTR MaLR -373 176 29 661 204 0 13 chr2 159895863 159896020 -93360563 - AluSc SINE Alu -17 292 138 318 169 0 0 chr2 159896021 159896110 -93360473 + C-rich Low_complexity Low_complexity 1 89 0 507 171 8 12 chr2 159896150 159896398 -93360185 + C-rich Low_complexity Low_complexity 1 247 0 208 341 171 0 chr2 159896784 159896913 -93359670 + MIR SINE MIR 2 152 -110 1962 115 72 32 chr2 159896919 159897266 -93359317 + THE1B LTR MaLR 4 364 0 376 267 33 0 chr2 159897475 159897565 -93359018 + LTR67 LTR ERVL 83 175 -382 341 202 46 18 chr2 159898617 159898726 -93357857 - Charlie1 DNA MER1_type -19 2742 2631 5286 159 31 40 chr2 159898727 159900307 -93356276 + L1MA7 LINE L1 4702 6290 -1 872 214 49 36 chr2 159900324 159900548 -93356035 - Charlie1 DNA MER1_type -2534 227 1 22 70 0 0 chr2 159900958 159901001 -93355582 + AT_rich Low_complexity Low_complexity 1 43 0 330 291 85 14 chr2 159901442 159901583 -93355000 - MIR SINE MIR -27 235 85 711 304 156 19 chr2 159901703 159901966 -93354617 - MLT1I LTR MaLR -67 342 44 1752 166 10 3 chr2 159903524 159903814 -93352769 - AluSx SINE Alu -20 292 1 27 0 0 0 chr2 159904362 159904389 -93352194 + AT_rich Low_complexity Low_complexity 1 27 0 1422 110 22 18 chr2 159906272 159906499 -93350084 - MER30 DNA MER1_type -2 228 1 21 36 0 0 chr2 159907631 159907659 -93348924 + AT_rich Low_complexity Low_complexity 1 28 0 28 48 0 0 chr2 159907962 159908004 -93348579 + AT_rich Low_complexity Low_complexity 1 42 0 216 0 0 0 chr2 159908460 159908484 -93348099 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 211 175 0 0 chr2 159909195 159909235 -93347348 + L3 LINE CR1 1188 1227 -350 6661 124 29 6 chr2 159909476 159912171 -93344412 + L1PA6 LINE L1 1 2634 -3520 6661 75 9 0 chr2 159912171 159913064 -93343519 + L1PA6 LINE L1 5254 6154 0 6661 124 29 6 chr2 159913064 159914639 -93341944 + L1PA6 LINE L1 2634 4172 -1982 399 41 0 0 chr2 159914639 159914688 -93341895 + (CA)n Simple_repeat Simple_repeat 2 50 0 6661 124 29 6 chr2 159914688 159915516 -93341067 + L1PA6 LINE L1 4172 6154 0 180 0 0 0 chr2 159915519 159915539 -93341044 + (TA)n Simple_repeat Simple_repeat 2 21 0 3198 137 20 0 chr2 159915542 159916046 -93340537 + L1PA15 LINE L1 5644 6157 -8 555 207 52 30 chr2 159916190 159916325 -93340258 + MLT2F LTR ERVL 4 141 -522 1031 262 87 22 chr2 159916332 159916702 -93339881 + MLT2F LTR ERVL 270 663 0 225 94 0 0 chr2 159917492 159917524 -93339059 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 22 0 0 0 chr2 159918773 159918795 -93337788 + AT_rich Low_complexity Low_complexity 1 22 0 247 292 45 22 chr2 159919750 159919839 -93336744 + L2 LINE L2 2229 2319 -995 234 288 15 0 chr2 159919949 159920015 -93336568 + L3 LINE CR1 637 703 -874 517 269 159 24 chr2 159920506 159920714 -93335869 + MIR SINE MIR 27 262 0 217 195 49 0 chr2 159920714 159920755 -93335828 + L3 LINE CR1 1326 1368 -209 198 0 0 0 chr2 159921428 159921450 -93335133 + (TA)n Simple_repeat Simple_repeat 2 23 0 11269 164 17 6 chr2 159922007 159924882 -93331701 - L1PA13 LINE L1 -3 6160 3273 23 68 0 0 chr2 159925268 159925312 -93331271 + AT_rich Low_complexity Low_complexity 1 44 0 1034 184 16 11 chr2 159925463 159925648 -93330935 + MER58A DNA MER1_type 30 215 -9 1093 264 65 43 chr2 159925831 159926339 -93330244 - L1ME3A LINE L1 -37 6202 5684 414 0 0 0 chr2 159926350 159926396 -93330187 + (TG)n Simple_repeat Simple_repeat 2 47 0 231 36 0 0 chr2 159926424 159926452 -93330131 + (TG)n Simple_repeat Simple_repeat 2 29 0 442 268 92 52 chr2 159926452 159926702 -93329881 - L1ME3A LINE L1 -556 5683 5424 321 271 28 39 chr2 159926743 159926983 -93329600 - L1ME3A LINE L1 -857 5358 5031 381 291 86 38 chr2 159926984 159927557 -93329026 - L1ME3A LINE L1 -4734 1402 994 335 327 52 20 chr2 159927879 159928032 -93328551 + ERVL LTR ERVL 2016 2173 -3591 876 281 92 6 chr2 159928481 159928819 -93327764 + L1ME3A LINE L1 5795 6161 -9 2128 268 73 16 chr2 159928878 159929699 -93326884 + L1ME3A LINE L1 5254 6121 -49 1142 320 106 26 chr2 159929723 159930405 -93326178 + ERVL LTR ERVL 2266 3001 -2653 438 355 20 0 chr2 159930446 159930646 -93325937 + ERVL LTR ERVL 3055 3258 -2227 1221 199 65 122 chr2 159930835 159931195 -93325388 - MER4C LTR ERV1 0 465 139 2124 85 30 10 chr2 159931195 159931490 -93325093 + AluY SINE Alu 1 301 -10 1221 199 65 122 chr2 159931490 159931622 -93324961 - MER4C LTR ERV1 -326 139 1 1011 233 38 0 chr2 159931778 159932084 -93324499 + L1ME3 LINE L1 5790 6123 -41 22 0 0 0 chr2 159932095 159932117 -93324466 + AT_rich Low_complexity Low_complexity 1 22 0 2705 212 18 18 chr2 159932248 159932804 -93323779 - MER68 LTR ERV1 -6 556 1 387 314 27 36 chr2 159932805 159933025 -93323558 + ERVL LTR ERVL 5187 5404 -360 22 0 0 0 chr2 159933061 159933083 -93323500 + AT_rich Low_complexity Low_complexity 1 22 0 473 233 0 0 chr2 159933248 159933330 -93323253 - MER44D DNA MER2_type -8 697 616 1960 177 37 33 chr2 159933330 159933877 -93322706 - MLT2A2 LTR ERVL -2 552 1 1130 186 64 17 chr2 159933879 159934115 -93322468 - MER44D DNA MER2_type -85 524 8 877 308 88 35 chr2 159934905 159935279 -93321304 - L2 LINE L2 -339 2975 2582 380 159 0 14 chr2 159935281 159935350 -93321233 + L1P LINE L1 1810 1877 -4269 1924 172 32 41 chr2 159935559 159936000 -93320583 + L1PB4 LINE L1 5706 6142 -14 2245 186 15 43 chr2 159936050 159936588 -93319995 + L1MA7 LINE L1 5769 6291 0 302 325 144 16 chr2 159937206 159937400 -93319183 + HAL1b LINE L1 242 460 -888 1369 272 162 29 chr2 159937428 159938325 -93318258 + L1ME LINE L1 185 1194 -4886 541 291 146 21 chr2 159938309 159938776 -93317807 + L1M4 LINE L1 3354 3878 -2268 * 215 0 0 62 chr2 159938781 159938813 -93317770 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 544 81 30 0 chr2 159938822 159938921 -93317662 + (TAAA)n Simple_repeat Simple_repeat 3 104 0 546 266 53 62 chr2 159938960 159939283 -93317300 + L1ME2 LINE L1 5828 6147 -17 212 233 0 0 chr2 159939396 159939439 -93317144 + (TGGA)n Simple_repeat Simple_repeat 4 46 0 292 360 27 11 chr2 159939569 159939755 -93316828 + HAL1b LINE L1 445 633 -715 246 206 191 3 chr2 159940572 159940723 -93315860 - MIR SINE MIR -39 223 3 3359 243 59 55 chr2 159941647 159942872 -93313711 + L1MC4 LINE L1 6512 7741 -301 245 180 20 0 chr2 159943825 159943875 -93312708 + MADE1 DNA Mariner 30 80 0 259 234 191 0 chr2 159944985 159945079 -93311504 - L2 LINE L2 -6 3266 3155 641 264 91 60 chr2 159945255 159945607 -93310976 - MLT1L LTR MaLR -58 557 195 7569 209 102 39 chr2 159946934 159947318 -93309265 - L1PB3 LINE L1 -12 6142 5784 234 105 0 0 chr2 159947318 159947356 -93309227 + (CA)n Simple_repeat Simple_repeat 1 38 0 7569 209 102 39 chr2 159947356 159950005 -93306578 - L1PB3 LINE L1 -370 5784 2918 4860 72 3 0 chr2 159950005 159950642 -93305941 + L1PA8 LINE L1 5476 6114 -58 2483 71 3 0 chr2 159950832 159951140 -93305443 - AluY SINE Alu -2 309 1 23 68 0 0 chr2 159951852 159951896 -93304687 + AT_rich Low_complexity Low_complexity 1 44 0 3610 33 4 4 chr2 159952307 159952781 -93303802 - L1PA2 LINE L1 0 6155 5704 318 209 27 18 chr2 159952907 159953017 -93303566 - L1P5 LINE L1 -519 5637 5527 1036 148 33 0 chr2 159953065 159953247 -93303336 - L1M2 LINE L1 -511 5780 5593 6051 133 18 11 chr2 159953326 159954341 -93302242 - L1MA2 LINE L1 0 6304 5283 751 228 0 12 chr2 159955507 159955674 -93300909 - AluJb SINE Alu -6 306 142 1548 257 109 67 chr2 159955921 159956848 -93299735 - L1ME3A LINE L1 -13 6157 5187 3873 120 23 20 chr2 159956861 159957215 -93299368 - L1MA1 LINE L1 0 6302 5944 2096 132 10 0 chr2 159957215 159957519 -93299064 - AluSx SINE Alu -5 307 1 3873 120 23 20 chr2 159957519 159957823 -93298760 - L1MA1 LINE L1 -358 5944 5642 382 59 0 0 chr2 159957844 159957895 -93298688 - MADE1 DNA Mariner 0 80 30 19220 179 29 20 chr2 159957895 159958664 -93297919 - L1ME LINE L1 -346 7235 6474 186 43 0 0 chr2 159958664 159958687 -93297896 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 19220 179 29 20 chr2 159958687 159965091 -93291492 - L1ME LINE L1 -1107 6474 13 1614 179 29 5 chr2 159965092 159965526 -93291057 - L1M2 LINE L1 -682 5609 5167 628 137 0 48 chr2 159966785 159966909 -93289674 - L1MA7 LINE L1 -1 7709 7592 11949 205 46 26 chr2 159966915 159968402 -93288181 - L1MA7 LINE L1 -235 7475 6021 1693 170 7 3 chr2 159968402 159968684 -93287899 - AluSx SINE Alu -29 283 1 11949 205 46 26 chr2 159968684 159971100 -93285483 - L1MA7 LINE L1 -1689 6021 3484 24 32 0 0 chr2 159971100 159971131 -93285452 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr2 159972671 159972693 -93283890 + AT_rich Low_complexity Low_complexity 1 22 0 351 289 86 27 chr2 159972714 159973122 -93283461 - L1MA7 LINE L1 -4191 3374 2943 2416 121 22 0 chr2 159973122 159973478 -93283105 + THE1B LTR MaLR 1 364 0 929 139 0 13 chr2 159973478 159973636 -93282947 + THE1B-int LTR MaLR 1 156 -1424 347 71 18 0 chr2 159973636 159973692 -93282891 + THE1B-int LTR MaLR 99 155 -1496 * 380 110 0 85 chr2 159973664 159973746 -93282837 + THE1B-int LTR MaLR 79 153 -1427 9271 115 34 21 chr2 159973746 159974047 -93282536 + THE1B-int LTR MaLR 97 393 -1187 2089 131 3 0 chr2 159974047 159974338 -93282245 + AluSp SINE Alu 1 292 -21 9271 115 34 21 chr2 159974338 159975501 -93281082 + THE1B-int LTR MaLR 393 1580 0 2053 174 22 0 chr2 159975501 159975857 -93280726 + THE1B LTR MaLR 1 364 0 1714 245 31 25 chr2 159975857 159976705 -93279878 - L1M3b LINE L1 -4292 2557 1703 4188 200 13 11 chr2 159976760 159977911 -93278672 - L1PB4 LINE L1 -14 6142 4991 3736 286 33 11 chr2 159977934 159978381 -93278202 - L1PA15-16 LINE L1 -3344 3505 3069 2138 122 0 7 chr2 159978381 159978684 -93277899 + AluY SINE Alu 4 304 -7 3736 286 33 11 chr2 159978684 159979938 -93276645 - L1PA15-16 LINE L1 -3780 3069 1774 789 303 19 15 chr2 159979978 159980302 -93276281 - L1PA15-16 LINE L1 -5189 1661 1337 299 292 0 0 chr2 159980289 159980378 -93276205 - L1PA15-16 LINE L1 -5286 1563 1475 * 345 143 0 0 chr2 159980375 159980424 -93276159 + L1PA15-16 LINE L1 1417 1465 -5384 4786 249 23 61 chr2 159980474 159982461 -93274122 - L1PA15-16 LINE L1 -5391 1458 1 1100 317 73 56 chr2 159982462 159983106 -93273477 - L1M3b LINE L1 -5038 1741 1087 251 208 31 10 chr2 159984080 159984176 -93272407 + L1ME4a LINE L1 6021 6118 -3 1453 187 10 58 chr2 159984411 159984705 -93271878 + AluJo SINE Alu 3 282 -30 656 147 0 0 chr2 159987176 159987285 -93269298 + MLT1A1 LTR MaLR 1 109 -256 255 216 0 0 chr2 159987351 159987402 -93269181 - MLT1I LTR MaLR -248 161 111 4153 122 40 92 chr2 159987411 159988222 -93268361 - LTR1 LTR ERV1 -2 783 16 651 141 0 0 chr2 159988540 159988639 -93267944 - L1PB4 LINE L1 -7 6149 6051 620 265 86 11 chr2 159988692 159988927 -93267656 + MIR SINE MIR 2 250 -12 22 0 0 0 chr2 159989438 159989460 -93267123 + AT_rich Low_complexity Low_complexity 1 22 0 462 36 0 0 chr2 159990010 159990066 -93266517 + (TA)n Simple_repeat Simple_repeat 2 57 0 414 310 84 116 chr2 159990600 159990935 -93265648 - L2 LINE L2 -23 3249 2926 482 255 130 58 chr2 159991629 159991836 -93264747 + MLT1F1 LTR MaLR 102 323 -244 512 182 0 55 chr2 159991836 159991946 -93264637 + MLT1B LTR MaLR 1 104 -286 316 232 37 37 chr2 159991946 159992028 -93264555 - MER7A DNA MER2_type 0 337 256 1484 139 23 34 chr2 159992097 159992363 -93264220 - MER7A DNA MER2_type -83 263 3 1205 189 30 77 chr2 159992364 159992661 -93263922 + MLT1B LTR MaLR 104 386 -4 191 30 0 61 chr2 159993190 159993223 -93263360 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2293 111 33 19 chr2 159993386 159993754 -93262829 + THE1C LTR MaLR 3 375 0 2261 152 14 25 chr2 159993756 159994228 -93262355 + MLT1B-int LTR MaLR 2 397 -1183 422 153 106 0 chr2 159994207 159994292 -93262291 + THE1-int LTR MaLR 415 508 -1072 * 4371 247 34 11 chr2 159994364 159995360 -93261223 + L1PA12 LINE L1 348 1366 -6215 328 148 16 16 chr2 159995359 159995420 -93261163 - L1PA12 LINE L1 -5836 1745 1685 * 338 241 36 15 chr2 159995552 159995689 -93260894 - L1M4 LINE L1 -847 5299 5160 227 232 18 0 chr2 159995704 159995760 -93260823 + (TCTA)n Simple_repeat Simple_repeat 3 59 0 4048 178 40 15 chr2 159995762 159996620 -93259963 - L1MB8 LINE L1 -9 6169 5291 716 265 67 80 chr2 159996659 159997420 -93259163 - L1MB8 LINE L1 -1005 5141 4393 2233 96 0 3 chr2 159997420 159997711 -93258872 - AluSq SINE Alu -23 290 1 716 265 67 80 chr2 159997711 159997916 -93258667 - L1MB8 LINE L1 -1753 4393 4187 381 222 11 0 chr2 159997933 159998023 -93258560 - L1MA10 LINE L1 -9 6325 6235 321 274 19 89 chr2 159998078 159998235 -93258348 - L1ME1 LINE L1 -123 6043 5898 202 196 22 43 chr2 159998235 159998327 -93258256 + (TTATA)n Simple_repeat Simple_repeat 1 90 0 476 200 14 76 chr2 159998327 159998472 -93258111 - L1ME1 LINE L1 -235 5929 5794 259 172 69 0 chr2 159998526 159998584 -93257999 - L1ME1 LINE L1 -384 5782 5721 739 239 36 95 chr2 159998697 159999086 -93257497 + L1PA13 LINE L1 1369 1734 -5847 13797 194 13 14 chr2 159999610 160003959 -93252624 + L1PA13 LINE L1 1607 5958 -1626 5210 120 18 65 chr2 160003932 160004333 -93252250 + L1PA13 LINE L1 6506 6924 -677 232 98 49 0 chr2 160004333 160004374 -93252209 + MADE1 DNA Mariner 1 43 -37 5210 120 18 65 chr2 160004374 160005066 -93251517 + L1PA13 LINE L1 6924 7601 0 1749 161 29 19 chr2 160005161 160005477 -93251106 - MER2 DNA MER2_type -3 342 24 375 286 43 5 chr2 160005516 160005701 -93250882 - L1ME4a LINE L1 -198 5923 5732 274 288 25 0 chr2 160005745 160005825 -93250758 - L1ME4a LINE L1 -485 5636 5555 2317 99 0 10 chr2 160005938 160006250 -93250333 - AluSc SINE Alu 0 309 1 23 78 0 0 chr2 160007186 160007237 -93249346 + AT_rich Low_complexity Low_complexity 1 51 0 2232 109 0 0 chr2 160007503 160007797 -93248786 - AluSg SINE Alu -16 294 1 23 0 0 0 chr2 160008170 160008193 -93248390 + AT_rich Low_complexity Low_complexity 1 23 0 466 273 182 0 chr2 160010942 160011085 -93245498 + MER5A DNA MER1_type 21 189 0 624 309 89 10 chr2 160012668 160012959 -93243624 + MLT1I LTR MaLR 91 404 -5 351 0 0 0 chr2 160013025 160013064 -93243519 + (TC)n Simple_repeat Simple_repeat 1 39 0 4096 157 32 13 chr2 160013085 160013830 -93242753 - Tigger1 DNA MER2_type 0 2418 1660 5824 144 16 6 chr2 160013831 160014795 -93241788 - Tigger1 DNA MER2_type -1422 996 24 189 222 0 0 chr2 160015939 160015975 -93240608 + MIR SINE MIR 57 92 -170 1434 206 35 72 chr2 160016224 160016390 -93240193 + MLT1B LTR MaLR 1 172 -218 2581 55 0 0 chr2 160016390 160016701 -93239882 + AluY SINE Alu 1 311 0 1434 206 35 72 chr2 160016701 160016937 -93239646 + MLT1B LTR MaLR 172 388 -2 1348 211 13 38 chr2 160017139 160017456 -93239127 - AluJb SINE Alu -3 309 1 309 342 36 0 chr2 160018244 160018440 -93238143 + HAL1b LINE L1 378 580 -768 1265 262 126 75 chr2 160018863 160019827 -93236756 + L1MC5 LINE L1 6566 7519 -442 232 180 49 0 chr2 160020204 160020265 -93236318 + (TA)n Simple_repeat Simple_repeat 1 64 0 27 29 0 0 chr2 160020472 160020506 -93236077 + AT_rich Low_complexity Low_complexity 1 34 0 320 272 60 63 chr2 160020696 160020964 -93235619 - L1MEd LINE L1 -5291 828 562 1647 341 161 5 chr2 160021252 160022212 -93234371 + L2 LINE L2 376 1485 -1829 430 257 112 61 chr2 160022387 160022601 -93233982 - MLT1L LTR MaLR -225 390 166 532 323 50 15 chr2 160022721 160022922 -93233661 + L2 LINE L2 1474 1681 -1633 1986 116 7 10 chr2 160022926 160023242 -93233341 - AluY SINE Alu 0 311 1 429 270 197 0 chr2 160023930 160024067 -93232516 + MIR SINE MIR 74 237 -25 189 107 0 0 chr2 160024082 160024110 -93232473 + (TTA)n Simple_repeat Simple_repeat 2 29 0 233 353 118 25 chr2 160024110 160024229 -93232354 - MIR3 SINE MIR -69 139 10 990 244 26 70 chr2 160024887 160025273 -93231310 - L1ME3 LINE L1 0 6162 5794 411 298 16 24 chr2 160026562 160026686 -93229897 - L3 LINE CR1 -23 1554 1432 554 265 107 86 chr2 160026769 160027138 -93229445 - MLT1H LTR MaLR -57 498 139 2394 46 0 0 chr2 160027138 160027489 -93229094 + AluY SINE Alu 1 351 0 554 265 107 86 chr2 160027489 160027632 -93228951 - MLT1H LTR MaLR -416 139 1 270 320 219 7 chr2 160027896 160028165 -93228418 - L3 LINE CR1 -154 1423 1098 212 315 43 11 chr2 160028233 160028325 -93228258 - L3 LINE CR1 -625 952 858 509 312 83 47 chr2 160029025 160029483 -93227100 - L2 LINE L2 -92 3221 2752 252 154 80 9 chr2 160029540 160029609 -93226974 - MLT2B3 LTR ERVL 0 554 444 861 367 27 13 chr2 160029663 160030113 -93226470 + ERVL LTR ERVL 3081 3536 -2228 2928 145 10 8 chr2 160030242 160030726 -93225857 + MER31A LTR ERV1 1 485 0 633 200 33 0 chr2 160030726 160030876 -93225707 + L1MB7 LINE L1 5673 5827 -357 11032 231 50 65 chr2 160030877 160037404 -93219179 + L1P4 LINE L1 1 6396 -472 626 130 0 78 chr2 160037565 160037628 -93218955 + MLT1E3 LTR MaLR 1 53 -571 1837 148 114 78 chr2 160037628 160038041 -93218542 + MSTA LTR MaLR 1 428 0 626 130 0 78 chr2 160038041 160038092 -93218491 + MLT1E3 LTR MaLR 53 106 -518 742 274 11 0 chr2 160038099 160038278 -93218305 + MER20 DNA MER1_type 38 218 -1 470 310 75 56 chr2 160038546 160038587 -93217996 + LTR16C LTR ERVL 71 110 -381 405 0 0 0 chr2 160038587 160038632 -93217951 + (TG)n Simple_repeat Simple_repeat 2 46 0 470 310 75 56 chr2 160038632 160038858 -93217725 + LTR16C LTR ERVL 110 343 -148 290 176 20 0 chr2 160038859 160038910 -93217673 - MSTC LTR MaLR 0 428 377 1943 161 5 50 chr2 160039070 160039450 -93217133 - MSTC LTR MaLR -65 363 1 576 218 75 14 chr2 160039450 160039591 -93216992 + LTR16C LTR ERVL 342 491 0 499 295 166 44 chr2 160039599 160039969 -93216614 - L2 LINE L2 -568 2746 2423 2095 143 5 60 chr2 160039969 160040320 -93216263 - THE1B LTR MaLR 0 364 34 2258 93 0 10 chr2 160040320 160040622 -93215961 + AluY SINE Alu 1 299 -12 2095 143 5 60 chr2 160040622 160040655 -93215928 - THE1B LTR MaLR -330 34 1 11335 102 5 6 chr2 160040655 160042237 -93214346 - THE1B-int LTR MaLR 0 1580 1 2376 129 5 30 chr2 160042237 160042609 -93213974 - THE1B LTR MaLR 0 364 2 499 295 166 44 chr2 160042609 160042718 -93213865 - L2 LINE L2 -890 2424 2206 303 303 76 38 chr2 160043229 160043467 -93213116 - L1ME LINE L1 -357 5764 5518 316 277 113 14 chr2 160043498 160043639 -93212944 - L1ME LINE L1 -2340 5468 5314 655 241 194 28 chr2 160044258 160044582 -93212001 + LTR50 LTR ERVL 52 429 -366 267 304 64 8 chr2 160045543 160045668 -93210915 + L3b LINE CR1 1243 1374 -209 758 226 38 0 chr2 160045734 160045893 -93210690 - MER58A DNA MER1_type -1 223 59 2552 204 15 4 chr2 160045894 160046375 -93210208 + Tigger7 DNA MER2_type 1 486 -2001 895 229 66 20 chr2 160046379 160046692 -93209891 + Tigger7 DNA MER2_type 394 2486 -1 235 308 0 0 chr2 160046699 160046751 -93209832 - MER58A DNA MER1_type -172 52 1 253 250 0 0 chr2 160047239 160047299 -93209284 - Charlie8 DNA MER1_type -997 1420 1361 593 257 53 15 chr2 160047395 160047601 -93208982 - Charlie8 DNA MER1_type -2144 273 60 1312 178 68 34 chr2 160049157 160049483 -93207100 - L1MA9 LINE L1 -10 6302 5966 7510 35 1 0 chr2 160049486 160050387 -93206196 - L1PA3 LINE L1 0 6155 5254 6550 171 37 30 chr2 160050405 160052535 -93204048 - L1MA9 LINE L1 -329 5983 3851 338 250 77 3 chr2 160053725 160053889 -93202694 - LTR33 LTR ERVL -301 220 1 258 330 104 33 chr2 160054388 160054600 -93201983 - MIR SINE MIR -5 257 31 282 56 0 0 chr2 160055702 160055738 -93200845 + (CA)n Simple_repeat Simple_repeat 2 37 0 567 301 68 52 chr2 160055931 160056085 -93200498 + L1MEc LINE L1 1057 1207 -5189 2446 174 17 2 chr2 160056085 160056505 -93200078 - MSTB LTR MaLR 0 426 1 8566 182 18 12 chr2 160056513 160058153 -93198430 - MSTB-int LTR MaLR -2 1649 1 2371 146 22 65 chr2 160058153 160058598 -93197985 - MSTB LTR MaLR 0 426 1 567 301 68 52 chr2 160058598 160059171 -93197412 + L1MEc LINE L1 1212 1806 -4590 337 281 169 8 chr2 160059326 160059568 -93197015 + L1MEc LINE L1 2010 2290 -4106 762 211 85 31 chr2 160059573 160059894 -93196689 - LTR37A LTR ERV1 -2 424 49 1026 279 89 37 chr2 160059920 160060379 -93196204 + L1MEc LINE L1 2250 2769 -3446 180 0 0 0 chr2 160060379 160060399 -93196184 + (CA)n Simple_repeat Simple_repeat 1 20 0 1026 279 89 37 chr2 160060399 160060728 -93195855 + L1MEc LINE L1 2769 3079 -3136 569 232 33 20 chr2 160060852 160061003 -93195580 - LTR16A1 LTR ERVL -139 318 166 1434 254 122 33 chr2 160061386 160062344 -93194239 + L1MEc LINE L1 3126 4168 -2047 2797 259 79 67 chr2 160062455 160062858 -93193725 + L1ME LINE L1 111 508 -5888 2354 64 0 55 chr2 160062858 160063186 -93193397 + AluY SINE Alu 1 310 -1 2797 259 79 67 chr2 160063186 160064407 -93192176 + L1ME LINE L1 508 1755 -4641 1380 200 28 14 chr2 160064418 160064703 -93191880 + AluJo SINE Alu 22 310 -2 1531 221 105 42 chr2 160064703 160065677 -93190906 + L1ME LINE L1 1752 2754 -3461 696 211 7 0 chr2 160065676 160065818 -93190765 + L1ME LINE L1 5612 5754 -481 * 1447 200 60 37 chr2 160065825 160066350 -93190233 - MLT2A2 LTR ERVL -11 543 1 1032 284 117 7 chr2 160066636 160067079 -93189504 + L1ME3A LINE L1 5501 5992 -178 393 315 49 20 chr2 160067113 160067316 -93189267 - MER63A DNA MER1_type -1 209 1 292 172 0 16 chr2 160067323 160067387 -93189196 + L1ME3A LINE L1 6105 6167 -3 229 208 42 52 chr2 160067626 160067722 -93188861 - Charlie8 DNA MER1_type -1928 489 395 376 333 25 19 chr2 160067724 160067883 -93188700 + MIR SINE MIR 8 167 -95 639 308 154 24 chr2 160067912 160068427 -93188156 - L2 LINE L2 -36 3277 2692 1308 181 4 8 chr2 160068459 160068718 -93187865 + MER44D DNA MER2_type 1 528 -81 2064 101 4 4 chr2 160068751 160069029 -93187554 - AluSq SINE Alu -24 289 12 385 222 12 0 chr2 160069062 160069143 -93187440 + MER44D DNA MER2_type 528 609 0 225 248 99 10 chr2 160069196 160069297 -93187286 - Charlie8 DNA MER1_type -2220 197 88 243 272 87 39 chr2 160070706 160070809 -93185774 - L2 LINE L2 -18 3295 3188 344 355 70 5 chr2 160071157 160071343 -93185240 - MIR SINE MIR -4 258 61 2077 127 0 37 chr2 160071562 160071885 -93184698 - AluSq SINE Alu -2 311 1 23 0 0 0 chr2 160073284 160073307 -93183276 + AT_rich Low_complexity Low_complexity 1 23 0 199 356 173 10 chr2 160073747 160073851 -93182732 - L2 LINE L2 -8 3264 3144 1439 50 10 0 chr2 160074398 160074597 -93181986 - L1PA2 LINE L1 -1720 4426 4226 7958 9 0 0 chr2 160074601 160076332 -93180251 + L1PA2 LINE L1 4423 6155 0 207 276 26 13 chr2 160077418 160077494 -93179089 + L2 LINE L2 3102 3178 -135 3676 128 10 0 chr2 160077498 160078021 -93178562 - MER1A DNA MER1_type -1 528 1 208 250 36 0 chr2 160078033 160078089 -93178494 + L2 LINE L2 3185 3242 -71 300 284 12 0 chr2 160078155 160078236 -93178347 + L2 LINE L2 3230 3311 -2 246 353 23 15 chr2 160078324 160078457 -93178126 - L2 LINE L2 -483 2831 2698 1983 222 57 67 chr2 160078980 160079724 -93176859 - L1MC4 LINE L1 -6 8036 7301 452 297 161 40 chr2 160079737 160080209 -93176374 + MLT1H LTR MaLR 13 541 -8 301 259 143 0 chr2 160080209 160080321 -93176262 - L1MC4 LINE L1 -746 7296 7169 256 325 56 16 chr2 160080861 160080987 -93175596 - MIR SINE MIR -90 172 42 280 68 0 45 chr2 160081081 160081125 -93175458 - MIR SINE MIR -32 230 189 207 148 19 37 chr2 160081869 160081923 -93174660 + G-rich Low_complexity Low_complexity 2 54 0 774 206 31 45 chr2 160081952 160082239 -93174344 + pTR5 LTR ERV1 746 1028 -1410 258 293 20 34 chr2 160082883 160083030 -93173553 + (TCTCTG)n Simple_repeat Simple_repeat 2 146 0 402 132 0 0 chr2 160083822 160083898 -93172685 + (TC)n Simple_repeat Simple_repeat 1 76 0 206 267 17 0 chr2 160084570 160084630 -93171953 + L2 LINE L2 3251 3311 -2 23 33 0 0 chr2 160085319 160085349 -93171234 + AT_rich Low_complexity Low_complexity 1 30 0 371 20 0 20 chr2 160086204 160086253 -93170330 + (CA)n Simple_repeat Simple_repeat 1 48 0 249 313 23 46 chr2 160087833 160087964 -93168619 - MIR SINE MIR -8 254 127 223 290 75 32 chr2 160088990 160089083 -93167500 - MER5A DNA MER1_type -55 134 38 651 261 45 0 chr2 160089153 160089329 -93167254 - MIR SINE MIR -21 241 58 318 50 0 0 chr2 160089365 160089405 -93167178 + (TG)n Simple_repeat Simple_repeat 2 41 0 1497 165 70 33 chr2 160089407 160089680 -93166903 - AluJo SINE Alu -29 283 1 216 0 0 0 chr2 160090962 160090986 -93165597 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1150 172 33 28 chr2 160092639 160092854 -93163729 - AluJo SINE Alu -13 299 84 323 197 66 156 chr2 160092856 160093046 -93163537 + HAL1 LINE L1 814 971 -1536 374 85 17 0 chr2 160093046 160093105 -93163478 + (TA)n Simple_repeat Simple_repeat 1 60 0 323 197 66 156 chr2 160093105 160093203 -93163380 + HAL1 LINE L1 971 1076 -1431 537 250 77 31 chr2 160093393 160093589 -93162994 + HAL1 LINE L1 1551 1755 -752 311 323 16 8 chr2 160093733 160093860 -93162723 + HAL1 LINE L1 2005 2132 -375 351 263 11 89 chr2 160093922 160094112 -93162471 + HAL1b LINE L1 737 911 -437 281 348 87 9 chr2 160094549 160094664 -93161919 + MIR SINE MIR 30 153 -55 884 74 0 0 chr2 160094667 160094775 -93161808 + AluSq/x SINE Alu 24 131 -182 384 218 0 0 chr2 160094775 160094862 -93161721 + (TATG)n Simple_repeat Simple_repeat 2 88 0 261 0 0 0 chr2 160094864 160094893 -93161690 + (CA)n Simple_repeat Simple_repeat 2 30 0 1011 159 7 0 chr2 160094897 160095091 -93161492 + AluSp SINE Alu 134 328 0 234 62 0 0 chr2 160096006 160096038 -93160545 + (GA)n Simple_repeat Simple_repeat 1 32 0 1595 49 5 5 chr2 160096219 160096423 -93160160 - L1PA4 LINE L1 0 6155 5952 1631 45 0 0 chr2 160096423 160096623 -93159960 + L1PA4 LINE L1 5771 5970 -185 295 244 11 33 chr2 160096988 160097078 -93159505 + MIR SINE MIR 70 157 -105 309 188 43 14 chr2 160097121 160097190 -93159393 - MIR SINE MIR -43 219 149 256 269 37 56 chr2 160097188 160097296 -93159287 + MIR SINE MIR 157 262 0 * 22 0 0 0 chr2 160098833 160098855 -93157728 + AT_rich Low_complexity Low_complexity 1 22 0 2242 119 27 11 chr2 160099441 160099810 -93156773 - THE1C LTR MaLR 0 375 1 401 296 158 13 chr2 160099817 160099969 -93156614 + MER5A DNA MER1_type 13 186 -3 371 58 0 19 chr2 160100574 160100626 -93155957 + THE1A LTR MaLR 1 51 -304 1220 341 33 13 chr2 160100726 160101271 -93155312 - L2 LINE L2 -980 2334 1779 303 340 107 0 chr2 160101699 160101858 -93154725 + L1ME4a LINE L1 5757 5932 -189 28 48 0 0 chr2 160102036 160102078 -93154505 + AT_rich Low_complexity Low_complexity 1 42 0 300 300 23 8 chr2 160102417 160102547 -93154036 + HsTC2 DNA Tc2 423 554 -1344 218 422 65 0 chr2 160102958 160103188 -93153395 - L3 LINE CR1 -1130 447 203 206 217 22 0 chr2 160103198 160103244 -93153339 + CT-rich Low_complexity Low_complexity 4 50 0 1707 136 4 4 chr2 160103900 160104172 -93152411 + L1PB1 LINE L1 5877 6148 -3 2235 107 3 3 chr2 160104289 160104589 -93151994 + AluSx SINE Alu 1 300 -12 552 99 52 17 chr2 160105083 160105255 -93151328 + (TAGA)n Simple_repeat Simple_repeat 3 180 0 204 47 78 31 chr2 160105272 160105336 -93151247 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 924 217 31 8 chr2 160105718 160105976 -93150607 + L1MB8 LINE L1 5908 6171 -7 1608 267 122 10 chr2 160106018 160106800 -93149783 + L1ME3A LINE L1 5129 5992 -178 392 315 49 20 chr2 160106834 160107037 -93149546 - MER63A DNA MER1_type -1 209 1 298 172 0 16 chr2 160107044 160107108 -93149475 + L1ME3A LINE L1 6105 6167 -3 236 208 42 52 chr2 160107347 160107443 -93149140 - Charlie8 DNA MER1_type -1928 489 395 379 333 25 19 chr2 160107445 160107604 -93148979 + MIR SINE MIR 8 167 -95 647 305 154 24 chr2 160107633 160108148 -93148435 - L2 LINE L2 -36 3277 2692 1321 181 4 8 chr2 160108180 160108439 -93148144 + MER44D DNA MER2_type 1 528 -81 2031 101 4 4 chr2 160108472 160108750 -93147833 - AluSq SINE Alu -24 289 12 380 222 12 0 chr2 160108783 160108864 -93147719 + MER44D DNA MER2_type 524 605 0 237 248 99 10 chr2 160108917 160109018 -93147565 - Charlie8 DNA MER1_type -2231 186 77 240 272 87 39 chr2 160110427 160110530 -93146053 - L2 LINE L2 -18 3295 3188 351 355 70 5 chr2 160110878 160111064 -93145519 - MIR SINE MIR -4 258 61 2050 127 0 37 chr2 160111283 160111606 -93144977 - AluSq SINE Alu -2 311 1 23 0 0 0 chr2 160113005 160113028 -93143555 + AT_rich Low_complexity Low_complexity 1 23 0 201 356 173 10 chr2 160113468 160113572 -93143011 - L2 LINE L2 -8 3264 3144 1642 24 10 0 chr2 160114119 160114324 -93142259 - L1PA4 LINE L1 -1720 4426 4220 * 8113 23 2 0 chr2 160114322 160115867 -93140716 + L1PA4 LINE L1 4423 5970 -185 298 244 11 33 chr2 160116232 160116322 -93140261 + MIR SINE MIR 70 157 -105 332 253 35 11 chr2 160116347 160116434 -93140149 - MIR SINE MIR -25 237 149 254 269 37 56 chr2 160116432 160116540 -93140043 + MIR SINE MIR 157 262 0 * 22 0 0 0 chr2 160118077 160118099 -93138484 + AT_rich Low_complexity Low_complexity 1 22 0 548 279 65 47 chr2 160122648 160123154 -93133429 - L1ME4a LINE L1 -2 6119 5605 206 217 22 0 chr2 160123808 160123854 -93132729 + GA-rich Low_complexity Low_complexity 4 50 0 261 413 65 0 chr2 160123864 160124094 -93132489 + L3 LINE CR1 203 447 -1130 955 266 23 9 chr2 160124505 160124920 -93131663 - HsTC2 DNA Tc2 -1344 554 64 334 277 18 9 chr2 160124968 160125080 -93131503 + L1ME LINE L1 5594 5706 -415 231 219 36 29 chr2 160125608 160125745 -93130838 + (TA)n Simple_repeat Simple_repeat 1 138 0 1307 124 25 0 chr2 160125832 160126033 -93130550 - L1PA15 LINE L1 0 6165 5960 2211 208 132 44 chr2 160126145 160127192 -93129391 - L1MC4 LINE L1 -5 8037 6810 31 26 0 0 chr2 160127904 160127942 -93128641 + AT_rich Low_complexity Low_complexity 1 38 0 381 298 76 6 chr2 160128275 160128433 -93128150 - Charlie8 DNA MER1_type -2248 169 1 279 312 55 9 chr2 160128484 160128593 -93127990 + MIR SINE MIR 38 151 -111 213 39 0 0 chr2 160129160 160129186 -93127397 + (TA)n Simple_repeat Simple_repeat 2 27 0 1664 104 0 0 chr2 160129186 160129407 -93127176 - AluSg/x SINE Alu -8 302 82 1955 214 48 6 chr2 160130369 160130884 -93125699 - L1 LINE L1 -1281 4865 4329 384 298 40 40 chr2 160132030 160132181 -93124402 - MIR SINE MIR -106 156 6 489 81 81 0 chr2 160132631 160132705 -93123878 + MADE1 DNA Mariner 1 80 0 478 303 32 41 chr2 160132719 160132940 -93123643 + MIR SINE MIR 3 221 -41 21 57 0 0 chr2 160132940 160132975 -93123608 + AT_rich Low_complexity Low_complexity 1 35 0 279 262 63 16 chr2 160133057 160133183 -93123400 - L1ME3A LINE L1 -52 6913 6782 1550 276 33 20 chr2 160133285 160133896 -93122687 - L1ME3A LINE L1 -210 6747 6102 502 317 89 22 chr2 160134085 160134533 -93122050 - L1ME3A LINE L1 -1158 5783 5306 2127 112 9 18 chr2 160134534 160134864 -93121719 - Tigger7 DNA MER2_type 0 2487 2161 2898 200 43 2 chr2 160134867 160135403 -93121180 - Tigger7 DNA MER2_type -171 562 5 7677 25 25 11 chr2 160135502 160136536 -93120047 - L1PA4 LINE L1 -3 6152 5115 221 186 35 12 chr2 160136566 160136652 -93119931 + (TA)n Simple_repeat Simple_repeat 1 88 0 17189 201 21 17 chr2 160136655 160142655 -93113928 - L1PA13 LINE L1 -5 6809 787 3116 192 0 0 chr2 160142649 160143171 -93113412 - L1PA13 LINE L1 -6265 522 1 * 764 288 50 31 chr2 160143197 160143520 -93113063 - L1ME3A LINE L1 -1782 5159 4823 1639 126 4 4 chr2 160143520 160143758 -93112825 + AluSx SINE Alu 64 301 -11 764 288 50 31 chr2 160143758 160143892 -93112691 - L1ME3A LINE L1 -2118 4823 4693 829 329 105 31 chr2 160144000 160144554 -93112029 - L1ME3A LINE L1 -5324 1099 505 826 297 12 8 chr2 160144613 160144872 -93111711 - L1ME3A LINE L1 -6037 386 127 269 315 30 85 chr2 160144901 160145066 -93111517 - MLT1J LTR MaLR -116 395 240 504 59 0 0 chr2 160145341 160145409 -93111174 + (TTCC)n Simple_repeat Simple_repeat 1 68 0 1720 188 13 0 chr2 160145409 160145713 -93110870 - AluJo SINE Alu -4 308 1 341 317 98 15 chr2 160145742 160145947 -93110636 + MIR SINE MIR 13 234 -28 265 374 14 14 chr2 160146244 160146383 -93110200 + MIR3 SINE MIR 66 204 -4 316 281 6 113 chr2 160146520 160146680 -93109903 - L1ME3 LINE L1 -29 6133 5991 347 327 150 51 chr2 160147561 160148624 -93107959 + L2 LINE L2 1169 2336 -978 26 88 0 0 chr2 160148672 160148740 -93107843 + AT_rich Low_complexity Low_complexity 1 68 0 242 331 113 8 chr2 160149007 160149131 -93107452 - MIR SINE MIR -3 259 123 207 132 66 0 chr2 160149225 160149316 -93107267 + (TA)n Simple_repeat Simple_repeat 1 97 0 5495 129 24 0 chr2 160149498 160150882 -93105701 + L1PA15 LINE L1 4748 6153 -12 26 0 0 0 chr2 160152080 160152106 -93104477 + AT_rich Low_complexity Low_complexity 1 26 0 2189 108 0 16 chr2 160152142 160152458 -93104125 - AluSx SINE Alu -1 311 1 4100 37 0 0 chr2 160152799 160153288 -93103295 - L1PA5 LINE L1 0 6154 5666 6865 154 12 6 chr2 160153308 160155320 -93101263 - L1PA11 LINE L1 -8 6166 4146 25 0 0 0 chr2 160155422 160155447 -93101136 + AT_rich Low_complexity Low_complexity 1 25 0 260 255 37 121 chr2 160156354 160156521 -93100062 - L1ME LINE L1 -488 5633 5484 21 0 0 0 chr2 160156563 160156584 -93099999 + AT_rich Low_complexity Low_complexity 1 21 0 222 265 51 10 chr2 160158489 160158587 -93097996 + MER5A DNA MER1_type 11 112 -77 12756 209 52 21 chr2 160158599 160160325 -93096258 - L1PA15 LINE L1 -2 6163 4492 342 0 0 0 chr2 160160325 160160363 -93096220 + (TG)n Simple_repeat Simple_repeat 2 39 0 12756 209 52 21 chr2 160160363 160161873 -93094710 - L1PA15 LINE L1 -1673 4492 3030 2188 125 0 0 chr2 160161873 160162186 -93094397 - AluSq SINE Alu 0 313 1 12756 209 52 21 chr2 160162186 160162959 -93093624 - L1PA15 LINE L1 -3135 3030 2003 192 40 0 0 chr2 160162959 160162984 -93093599 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 12756 209 52 21 chr2 160162984 160163371 -93093212 - L1PA15 LINE L1 -4162 2003 1630 269 225 28 28 chr2 160163373 160163444 -93093139 + L2 LINE L2 3242 3312 -1 509 179 67 20 chr2 160163662 160163812 -93092771 - LTR40c LTR ERVL -9 453 308 456 286 53 13 chr2 160163915 160164175 -93092408 - LTR40c LTR ERVL -158 304 3 3807 250 42 40 chr2 160164177 160165344 -93091239 - HERVL40 LTR ERVL 0 5530 4362 887 212 108 39 chr2 160165345 160165604 -93090979 - MER2 DNA MER2_type -1 344 68 877 250 21 0 chr2 160165607 160165795 -93090788 - HERVL40 LTR ERVL -1619 3911 3720 250 284 0 0 chr2 160165796 160165863 -93090720 - HERVL40 LTR ERVL -4164 1366 1300 202 298 143 101 chr2 160165892 160165985 -93090598 - L2 LINE L2 -518 2796 2708 2148 90 17 0 chr2 160165985 160166275 -93090308 - AluY SINE Alu -16 295 1 202 298 143 101 chr2 160166275 160166362 -93090221 - L2 LINE L2 -606 2708 2626 2299 189 39 13 chr2 160166362 160166903 -93089680 + L1MB8 LINE L1 5615 6169 -9 202 298 143 101 chr2 160166903 160167057 -93089526 - L2 LINE L2 -688 2626 2447 1060 308 159 34 chr2 160167058 160167815 -93088768 - L2 LINE L2 -1330 1984 1119 1826 149 57 39 chr2 160167815 160168198 -93088385 - MLT1B LTR MaLR 0 390 1 1060 308 159 34 chr2 160168198 160168245 -93088338 - L2 LINE L2 -2195 1119 1079 721 271 117 52 chr2 160168266 160168635 -93087948 - L2 LINE L2 -96 3217 2825 463 186 0 29 chr2 160168729 160168831 -93087752 - L1ME2 LINE L1 -3 6161 6063 603 355 62 4 chr2 160169007 160169249 -93087334 - MIR SINE MIR 0 262 7 2079 128 10 0 chr2 160169511 160169815 -93086768 - AluSx SINE Alu -5 307 1 202 146 24 0 chr2 160170203 160170244 -93086339 + A-rich Low_complexity Low_complexity 2 43 0 414 123 0 0 chr2 160170324 160170389 -93086194 - AluSp/q SINE Alu -22 291 227 1159 134 0 0 chr2 160170390 160170554 -93086029 - AluSx SINE Alu -148 164 1 200 297 27 14 chr2 160171471 160171545 -93085038 - MIR SINE MIR -130 132 58 22 0 0 0 chr2 160172724 160172746 -93083837 + AT_rich Low_complexity Low_complexity 1 22 0 2249 112 0 0 chr2 160172758 160173053 -93083530 - AluSq SINE Alu -18 295 1 346 245 182 42 chr2 160173076 160173268 -93083315 - MIR SINE MIR -43 219 1 322 291 91 67 chr2 160173996 160174161 -93082422 + MIR3 SINE MIR 37 205 -3 1640 216 44 6 chr2 160175688 160176031 -93080552 - MLT1A1 LTR MaLR 0 365 10 222 394 63 0 chr2 160176232 160176359 -93080224 + MIR3 SINE MIR 60 194 -14 203 343 43 36 chr2 160176418 160176558 -93080025 - L2 LINE L2 0 3313 3173 200 189 0 0 chr2 160176570 160176607 -93079976 + (TG)n Simple_repeat Simple_repeat 2 38 0 399 219 0 0 chr2 160176607 160176680 -93079903 + MER7A DNA MER2_type 2 74 -274 4585 129 19 7 chr2 160176682 160177497 -93079086 - L1P LINE L1 -750 5413 4594 5132 104 20 5 chr2 160177505 160178264 -93078319 + L1PA13 LINE L1 5386 6155 -8 1740 139 37 0 chr2 160178265 160178538 -93078045 + MER7A DNA MER2_type 66 346 0 669 220 8 8 chr2 160178653 160178785 -93077798 + FLAM_C SINE Alu 2 133 0 560 284 96 53 chr2 160179089 160180051 -93076532 + L1MC4 LINE L1 4860 5401 -745 828 134 14 7 chr2 160180058 160180200 -93076383 + L1PA16 LINE L1 6024 6166 0 578 333 49 38 chr2 160180525 160180996 -93075587 - L2 LINE L2 -557 2757 2282 344 278 99 19 chr2 160181519 160181681 -93074902 + MIR3 SINE MIR 34 208 0 2033 179 35 33 chr2 160181870 160182419 -93074164 - MLT2A2 LTR ERVL 0 554 1 357 297 9 18 chr2 160182663 160182774 -93073809 - MIR SINE MIR -77 185 76 57 39 0 0 chr2 160183830 160183908 -93072675 + AT_rich Low_complexity Low_complexity 1 78 0 465 281 22 0 chr2 160183913 160184052 -93072531 - MIR SINE MIR -42 220 79 500 245 35 0 chr2 160184900 160185043 -93071540 - MER66A LTR ERV1 0 478 331 766 309 13 4 chr2 160185053 160185286 -93071297 + LOR1-int LTR ERV1 6890 7124 -996 8266 194 50 32 chr2 160185287 160187045 -93069538 - MER66B-int LTR ERV1 -2261 4415 2627 316 229 0 0 chr2 160187037 160187107 -93069476 - MER66B-int LTR ERV1 -4271 2405 2336 * 2816 170 53 21 chr2 160187095 160187978 -93068605 - MER66B-int LTR ERV1 -4507 2169 1223 735 280 23 23 chr2 160188044 160188258 -93068325 - MER66B-int LTR ERV1 -3542 3134 2921 2913 170 111 50 chr2 160188312 160189084 -93067499 - MER66B-int LTR ERV1 -5562 1114 296 972 220 65 79 chr2 160189207 160189561 -93067022 - MER66B-int LTR ERV1 -6277 399 51 1794 189 65 44 chr2 160189570 160190046 -93066537 - MER66B LTR ERV1 0 486 1 22 35 0 0 chr2 160190083 160190112 -93066471 + AT_rich Low_complexity Low_complexity 1 29 0 424 91 65 0 chr2 160190277 160190354 -93066229 + L1MA10 LINE L1 6252 6333 -1 239 282 26 0 chr2 160190746 160190824 -93065759 + L1 LINE L1 2386 2465 -3681 369 235 25 0 chr2 160191145 160191226 -93065357 + L2 LINE L2 3229 3311 -2 469 236 252 26 chr2 160191924 160192234 -93064349 - L1ME1 LINE L1 -3 6163 5784 557 272 89 64 chr2 160192243 160192556 -93064027 - MLT1A1 LTR MaLR -12 353 33 1773 211 53 45 chr2 160192561 160192989 -93063594 - L1ME1 LINE L1 -390 5776 5249 477 0 0 0 chr2 160192989 160193042 -93063541 + (TG)n Simple_repeat Simple_repeat 2 54 0 1773 211 53 45 chr2 160193042 160193279 -93063304 - L1ME1 LINE L1 -917 5249 5015 1798 171 0 3 chr2 160193425 160193724 -93062859 + AluSx SINE Alu 1 298 -14 25 65 0 0 chr2 160193805 160193851 -93062732 + AT_rich Low_complexity Low_complexity 1 46 0 21 116 0 0 chr2 160193923 160194035 -93062548 + AT_rich Low_complexity Low_complexity 1 112 0 247 319 53 16 chr2 160194078 160194266 -93062317 - L1ME LINE L1 -238 5883 5689 1740 209 28 21 chr2 160194323 160194759 -93061824 - L1MA4 LINE L1 -6 6294 5856 7897 241 32 26 chr2 160194831 160195632 -93060951 - L1M1 LINE L1 -4045 3520 2725 2312 60 0 10 chr2 160195632 160195930 -93060653 - AluY SINE Alu -16 295 1 7897 241 32 26 chr2 160195930 160197929 -93058654 - L1M1 LINE L1 -4840 2725 10 28 48 0 0 chr2 160198577 160198619 -93057964 + AT_rich Low_complexity Low_complexity 1 42 0 354 327 107 0 chr2 160198797 160198956 -93057627 - L1ME4a LINE L1 -189 5932 5757 2034 322 134 19 chr2 160199384 160200709 -93055874 + L2 LINE L2 1779 3276 -37 1335 234 71 38 chr2 160201063 160201511 -93055072 + MLT1C LTR MaLR 5 467 0 28 29 0 0 chr2 160202801 160202836 -93053747 + AT_rich Low_complexity Low_complexity 1 35 0 182 171 0 0 chr2 160203173 160203208 -93053375 + L2 LINE L2 3273 3307 -6 207 374 16 16 chr2 160203330 160203512 -93053071 + L2 LINE L2 2636 2817 -497 312 325 57 8 chr2 160203555 160203718 -93052865 + MIR3 SINE MIR 9 179 -29 * 647 289 57 0 chr2 160203709 160203903 -93052680 - L2 LINE L2 0 3313 3109 192 281 35 35 chr2 160204584 160204641 -93051942 + MER5A DNA MER1_type 133 189 0 247 381 30 12 chr2 160204642 160204810 -93051773 + L2 LINE L2 2804 2974 -340 1572 148 36 23 chr2 160204942 160205245 -93051338 + L1MA9 LINE L1 6001 6307 -5 358 315 94 40 chr2 160205264 160205540 -93051043 + L2 LINE L2 3023 3313 0 2441 106 22 5 chr2 160206536 160206905 -93049678 - THE1C LTR MaLR 0 375 1 390 303 158 13 chr2 160206912 160207064 -93049519 + MER5A DNA MER1_type 13 186 -3 2717 77 3 0 chr2 160207669 160208021 -93048562 + THE1A LTR MaLR 1 353 -2 892 144 0 63 chr2 160208045 160208219 -93048364 + FRAM SINE Alu 1 157 -19 202 365 12 12 chr2 160208256 160208341 -93048242 + MIR SINE MIR 158 242 -20 21 36 0 0 chr2 160208361 160208389 -93048194 + AT_rich Low_complexity Low_complexity 1 28 0 326 336 124 47 chr2 160209357 160209720 -93046863 - L2 LINE L2 -371 2943 2553 291 352 29 0 chr2 160209827 160209932 -93046651 - L2 LINE L2 -945 2369 2262 25 31 0 0 chr2 160210239 160210271 -93046312 + AT_rich Low_complexity Low_complexity 1 32 0 3580 51 0 11 chr2 160210481 160210935 -93045648 - L1PA5 LINE L1 -6 6148 5700 24 32 0 0 chr2 160211162 160211193 -93045390 + AT_rich Low_complexity Low_complexity 1 31 0 26 82 0 0 chr2 160212011 160212072 -93044511 + AT_rich Low_complexity Low_complexity 1 61 0 40 37 0 0 chr2 160213731 160213785 -93042798 + AT_rich Low_complexity Low_complexity 1 54 0 449 218 0 0 chr2 160213838 160213947 -93042636 - L1ME1 LINE L1 0 6334 6067 444 242 81 16 chr2 160214010 160214196 -93042387 - L1MEc LINE L1 -5176 1220 1023 244 285 166 26 chr2 160214258 160214409 -93042174 + MIR SINE MIR 91 262 0 195 364 80 11 chr2 160214740 160214828 -93041755 + L2 LINE L2 3141 3234 -38 24 0 0 0 chr2 160214851 160214875 -93041708 + AT_rich Low_complexity Low_complexity 1 24 0 555 332 56 61 chr2 160216012 160216639 -93039944 - L2 LINE L2 -433 2881 2258 21 36 0 0 chr2 160217250 160217278 -93039305 + AT_rich Low_complexity Low_complexity 1 28 0 2455 177 33 26 chr2 160217281 160217336 -93039247 - L1MA7 LINE L1 -12 6279 6226 255 61 0 0 chr2 160217336 160217369 -93039214 + (CA)n Simple_repeat Simple_repeat 2 34 0 2455 177 33 26 chr2 160217369 160217854 -93038729 - L1MA7 LINE L1 -65 6226 5735 413 333 85 15 chr2 160219307 160219508 -93037075 - MIR SINE MIR -4 258 44 272 342 87 12 chr2 160220958 160221119 -93035464 + MIR SINE MIR 6 178 -84 2397 75 3 7 chr2 160222676 160222982 -93033601 + AluY SINE Alu 1 305 -6 7169 55 0 4 chr2 160223178 160224193 -93032390 - L1PA5 LINE L1 0 6154 5142 21 57 0 0 chr2 160224567 160224602 -93031981 + AT_rich Low_complexity Low_complexity 1 35 0 7714 234 37 75 chr2 160224785 160226910 -93029673 - L1MA6 LINE L1 0 7719 5515 6864 67 12 2 chr2 160226910 160228164 -93028419 - L1PA7 LINE L1 -3 6151 4891 7714 234 37 75 chr2 160228164 160232058 -93024525 - L1MA6 LINE L1 -2204 5515 2097 658 346 92 11 chr2 160232380 160232828 -93023755 - L1MA6 LINE L1 -5797 1699 1216 2322 136 53 12 chr2 160232877 160233288 -93023295 + MSTA LTR MaLR 1 428 0 1942 128 3 7 chr2 160233471 160233767 -93022816 - AluSc SINE Alu -14 295 1 484 314 22 16 chr2 160235035 160235220 -93021363 - MER5A DNA MER1_type -3 186 1 30 0 0 0 chr2 160235876 160235906 -93020677 + AT_rich Low_complexity Low_complexity 1 30 0 1600 236 98 64 chr2 160236124 160236688 -93019895 + MLT1E1 LTR MaLR 1 583 -71 832 175 0 0 chr2 160237398 160237541 -93019042 - L1P LINE L1 -2015 4131 3989 3814 122 11 28 chr2 160237685 160238331 -93018252 - L1PA15 LINE L1 -2 6814 6180 12351 233 38 14 chr2 160238333 160238765 -93017818 - L1PA15 LINE L1 -1167 5630 5210 1636 134 28 0 chr2 160238765 160239018 -93017565 - AluSx SINE Alu -17 295 36 12351 233 38 14 chr2 160239018 160242593 -93013990 - L1PA15 LINE L1 -1587 5210 1505 2531 275 107 32 chr2 160242765 160243828 -93012755 - L1PA15 LINE L1 -5644 1143 1 2363 61 3 3 chr2 160243899 160244195 -93012388 - AluY SINE Alu -15 296 1 24 53 0 0 chr2 160244559 160244597 -93011986 + AT_rich Low_complexity Low_complexity 1 38 0 24 0 0 0 chr2 160245103 160245127 -93011456 + AT_rich Low_complexity Low_complexity 1 24 0 2147 110 7 0 chr2 160245679 160245979 -93010604 - AluSg SINE Alu -8 302 1 26 50 0 0 chr2 160246055 160246095 -93010488 + AT_rich Low_complexity Low_complexity 1 40 0 420 229 7 57 chr2 160247814 160248261 -93008322 + GA-rich Low_complexity Low_complexity 1 424 0 1685 120 96 4 chr2 160248616 160248866 -93007717 + AluSc SINE Alu 1 273 -36 468 0 0 0 chr2 160248866 160248918 -93007665 + (CA)n Simple_repeat Simple_repeat 1 52 0 38656 37 3 1 chr2 160248964 160254484 -93002099 - L1PA4 LINE L1 0 6155 623 785 42 0 0 chr2 160254484 160254580 -93002003 - L1PA4 LINE L1 -6050 96 1 261 340 16 63 chr2 160254598 160254789 -93001794 - L1ME4a LINE L1 -70 6051 5870 194 280 0 0 chr2 160254924 160254974 -93001609 - L2 LINE L2 -1 3312 3263 1271 204 74 41 chr2 160255710 160256077 -93000506 - MLT1B LTR MaLR -11 379 1 328 256 135 33 chr2 160258118 160258395 -92998188 + L1ME1 LINE L1 72 642 -5780 28 71 0 0 chr2 160258412 160258468 -92998115 + AT_rich Low_complexity Low_complexity 1 56 0 1984 275 103 33 chr2 160258637 160259834 -92996749 + L1ME1 LINE L1 1018 2129 -4812 1661 174 130 18 chr2 160259834 160260219 -92996364 + MSTA LTR MaLR 1 428 0 1984 275 103 33 chr2 160260219 160261226 -92995357 + L1ME1 LINE L1 2129 3472 -3469 621 247 27 27 chr2 160261220 160261483 -92995100 + L1ME1 LINE L1 3770 4032 -2909 * 1434 264 76 21 chr2 160261544 160262109 -92994474 + L1ME1 LINE L1 4282 4877 -2064 192 77 0 0 chr2 160262124 160262150 -92994433 + (T)n Simple_repeat Simple_repeat 1 26 0 2397 198 49 22 chr2 160262285 160262922 -92993661 + L1ME1 LINE L1 5618 6300 -661 2059 111 0 4 chr2 160262922 160263234 -92993349 + AluSg SINE Alu 1 311 0 2397 198 49 22 chr2 160263234 160263578 -92993005 + L1ME1 LINE L1 6300 6633 -328 2049 149 11 25 chr2 160263705 160264068 -92992515 - L1PB4 LINE L1 -5 6151 5794 2042 130 114 5 chr2 160264068 160264437 -92992146 + L1PB4 LINE L1 5384 5792 -364 260 336 75 19 chr2 160264867 160264974 -92991609 + L2 LINE L2 3193 3305 -8 207 304 0 0 chr2 160265826 160265882 -92990701 + (TG)n Simple_repeat Simple_repeat 1 56 0 192 40 0 0 chr2 160265920 160265945 -92990638 + (CTTTA)n Simple_repeat Simple_repeat 2 26 0 548 289 17 29 chr2 160266048 160266221 -92990362 - MER5B DNA MER1_type -3 175 5 2543 173 2 18 chr2 160266618 160267114 -92989469 + L1MA5 LINE L1 3994 4481 -1665 952 235 67 4 chr2 160267141 160267379 -92989204 + AluJo SINE Alu 6 258 -54 6198 170 14 6 chr2 160267387 160269183 -92987400 + L1MA5 LINE L1 4488 6300 0 314 343 58 29 chr2 160269323 160269460 -92987123 - L2 LINE L2 -9 3263 3123 536 335 45 13 chr2 160269677 160269901 -92986682 + MIR SINE MIR 3 233 -29 21 36 0 0 chr2 160270002 160270030 -92986553 + AT_rich Low_complexity Low_complexity 1 28 0 24 67 0 0 chr2 160270081 160270126 -92986457 + AT_rich Low_complexity Low_complexity 1 45 0 182 211 0 0 chr2 160271525 160271563 -92985020 - L2 LINE L2 -2106 1208 1171 430 281 199 19 chr2 160271734 160271955 -92984628 + L2 LINE L2 3012 3286 -27 255 61 0 0 chr2 160271955 160271988 -92984595 + (TA)n Simple_repeat Simple_repeat 2 34 0 430 281 199 19 chr2 160271988 160272022 -92984561 + L2 LINE L2 3286 3313 0 25 0 0 0 chr2 160272071 160272096 -92984487 + AT_rich Low_complexity Low_complexity 1 25 0 317 289 171 43 chr2 160272177 160272457 -92984126 - L2 LINE L2 -158 3155 2840 417 86 0 0 chr2 160272679 160272737 -92983846 + (TA)n Simple_repeat Simple_repeat 1 58 0 1297 139 0 28 chr2 160273149 160273365 -92983218 + AluSg/x SINE Alu 99 308 -1 23 0 0 0 chr2 160274056 160274079 -92982504 + AT_rich Low_complexity Low_complexity 1 23 0 1366 190 3 59 chr2 160275290 160275580 -92981003 + AluJo SINE Alu 1 274 -38 1566 218 5 40 chr2 160275837 160276241 -92980342 + MLT1B LTR MaLR 1 390 0 555 302 43 35 chr2 160276671 160276929 -92979654 + MIR SINE MIR 3 262 0 901 167 13 113 chr2 160277021 160277204 -92979379 - MER20 DNA MER1_type -3 216 61 2134 145 63 27 chr2 160277204 160277617 -92978966 - MSTA LTR MaLR 0 428 1 901 167 13 113 chr2 160277617 160277672 -92978911 - MER20 DNA MER1_type -158 61 2 27 62 0 0 chr2 160278536 160278584 -92977999 + AT_rich Low_complexity Low_complexity 1 48 0 289 239 18 9 chr2 160278590 160278699 -92977884 + (TA)n Simple_repeat Simple_repeat 1 110 0 217 89 33 56 chr2 160278711 160278801 -92977782 + (TA)n Simple_repeat Simple_repeat 2 89 0 26 30 0 0 chr2 160279128 160279161 -92977422 + AT_rich Low_complexity Low_complexity 1 33 0 2811 10 0 0 chr2 160280541 160280854 -92975729 - AluYb8 SINE Alu -5 313 1 358 284 18 9 chr2 160281404 160281513 -92975070 + L2 LINE L2 3199 3308 -5 2338 59 3 16 chr2 160281999 160282304 -92974279 - AluY SINE Alu -10 301 1 23 54 0 0 chr2 160284091 160284128 -92972455 + AT_rich Low_complexity Low_complexity 1 37 0 35 54 0 0 chr2 160286101 160286157 -92970426 + AT_rich Low_complexity Low_complexity 1 56 0 2053 117 0 0 chr2 160286280 160286593 -92969990 - AluY SINE Alu 0 313 1 223 333 125 0 chr2 160286745 160286841 -92969742 - L2 LINE L2 -55 3217 3110 232 267 12 47 chr2 160287190 160287264 -92969319 - L2 LINE L2 0 3313 3241 1257 255 32 19 chr2 160287264 160287633 -92968950 + MLT1A2 LTR MaLR 1 374 0 232 267 12 47 chr2 160287633 160287644 -92968939 - L2 LINE L2 -72 3241 3231 1724 313 54 6 chr2 160287752 160288440 -92968143 - L2 LINE L2 -191 3122 2391 672 194 0 0 chr2 160289042 160289171 -92967412 - LTR33 LTR ERVL 0 521 393 1520 191 69 33 chr2 160289180 160289541 -92967042 + MLT1A2 LTR MaLR 1 374 0 1938 159 0 3 chr2 160289608 160289916 -92966667 - AluSx SINE Alu 0 312 6 454 307 26 20 chr2 160290043 160290196 -92966387 - LTR33 LTR ERVL -364 157 4 496 199 0 52 chr2 160290319 160290455 -92966128 - L1MC4 LINE L1 0 8042 7914 958 187 25 30 chr2 160290496 160290699 -92965884 - MER76 LTR ERV -486 202 1 473 141 51 0 chr2 160290847 160290925 -92965658 - MSTA LTR MaLR -346 82 1 283 333 69 39 chr2 160291143 160291551 -92965032 - HAL1b LINE L1 -733 615 196 1628 147 215 6 chr2 160291676 160292030 -92964553 - MSTA LTR MaLR 0 428 1 215 236 0 0 chr2 160292272 160292327 -92964256 + T-rich Low_complexity Low_complexity 1 55 0 22211 149 23 6 chr2 160293072 160296930 -92959653 + L1MA3 LINE L1 15 3938 -3627 6268 145 7 28 chr2 160296953 160298324 -92958259 + L1MA3 LINE L1 6382 7724 0 371 311 111 13 chr2 160298334 160298559 -92958024 + L1ME4a LINE L1 1545 1791 -4605 305 288 54 19 chr2 160298571 160298776 -92957807 + L1ME4a LINE L1 4367 4578 -1637 360 276 116 28 chr2 160298778 160299028 -92957555 + L1ME4a LINE L1 4642 4913 -1302 2079 133 10 0 chr2 160299900 160300209 -92956374 + AluSx SINE Alu 1 312 0 1634 247 8 61 chr2 160300807 160301285 -92955298 - MER82 DNA MER2_type 0 653 201 534 235 104 27 chr2 160302214 160302397 -92954186 + Charlie1a DNA MER1_type 1 197 -1258 3326 224 65 25 chr2 160302408 160303468 -92953115 + Charlie1a DNA MER1_type 352 1454 -1 223 302 57 19 chr2 160303680 160303786 -92952797 - MIR SINE MIR -56 206 97 2931 175 66 12 chr2 160303811 160304383 -92952200 + L1M1 LINE L1 5025 5627 -1938 897 143 12 19 chr2 160304386 160304547 -92952036 + L1PA15 LINE L1 6001 6160 -5 312 275 60 13 chr2 160304720 160304869 -92951714 - L1ME LINE L1 -274 5847 5692 212 204 45 0 chr2 160305133 160305177 -92951406 - MIR SINE MIR -30 232 187 732 368 9 3 chr2 160305240 160305566 -92951017 - MLT1I LTR MaLR 0 409 82 553 292 0 0 chr2 160305682 160305812 -92950771 - MIR SINE MIR -112 150 21 314 319 45 65 chr2 160306620 160306912 -92949671 + L1ME4a LINE L1 5352 5637 -2240 334 274 65 24 chr2 160307056 160307224 -92949359 + L1ME4a LINE L1 5819 5993 -197 572 282 115 24 chr2 160308050 160308259 -92948324 + MIR SINE MIR 8 235 -27 22 0 0 0 chr2 160308694 160308716 -92947867 + AT_rich Low_complexity Low_complexity 1 22 0 695 309 35 7 chr2 160308716 160308998 -92947585 - MER50 LTR ERV1 -130 604 315 237 160 0 40 chr2 160309556 160309606 -92946977 + GA-rich Low_complexity Low_complexity 4 51 0 6646 96 0 0 chr2 160311986 160312941 -92943642 - L1P LINE L1 -803 5343 4389 270 266 117 21 chr2 160314811 160314905 -92941678 + MIR SINE MIR 30 132 -130 528 255 21 14 chr2 160315049 160315190 -92941393 + FLAM_C SINE Alu 1 142 -1 276 126 74 21 chr2 160315360 160315455 -92941128 + (TA)n Simple_repeat Simple_repeat 1 100 0 193 149 46 11 chr2 160315647 160315734 -92940849 + (TA)n Simple_repeat Simple_repeat 1 90 0 2032 126 0 3 chr2 160317729 160318015 -92938568 - AluSq SINE Alu -26 287 3 4132 231 26 38 chr2 160318101 160319169 -92937414 - L1M4b LINE L1 -5792 1067 13 344 339 100 42 chr2 160320385 160320715 -92935868 + L3 LINE CR1 427 775 -802 234 0 0 0 chr2 160321340 160321366 -92935217 + (A)n Simple_repeat Simple_repeat 1 26 0 24 0 0 0 chr2 160322279 160322303 -92934280 + AT_rich Low_complexity Low_complexity 1 24 0 205 152 22 22 chr2 160322851 160322897 -92933686 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 184 236 57 157 chr2 160322993 160323133 -92933450 - MIR SINE MIR -63 145 20 25 65 0 0 chr2 160324148 160324194 -92932389 + AT_rich Low_complexity Low_complexity 1 46 0 651 225 197 25 chr2 160324516 160324760 -92931823 + Charlie4a DNA MER1_type 222 507 -1 273 146 0 0 chr2 160326249 160326297 -92930286 + (TAAG)n Simple_repeat Simple_repeat 3 50 0 350 333 67 40 chr2 160326425 160326575 -92930008 - L2 LINE L2 -9 3263 3110 259 270 138 72 chr2 160327153 160327305 -92929278 - MIR3 SINE MIR -17 191 30 10221 210 44 11 chr2 160327715 160328920 -92927663 - L1PB4 LINE L1 -1 6857 5694 1474 207 21 7 chr2 160328920 160329205 -92927378 + AluJb SINE Alu 1 289 -23 10221 210 44 11 chr2 160329205 160330418 -92926165 - L1PB4 LINE L1 -1164 5694 4523 225 0 0 0 chr2 160330418 160330443 -92926140 + (TTG)n Simple_repeat Simple_repeat 3 27 0 10221 210 44 11 chr2 160330443 160331494 -92925089 - L1PB4 LINE L1 -2335 4523 3270 1609 120 0 12 chr2 160331497 160331729 -92924854 + L1PBa LINE L1 1091 1321 -5542 1256 136 9 23 chr2 160331729 160331950 -92924633 + L1PB1 LINE L1 5934 6151 0 739 263 32 0 chr2 160331990 160332237 -92924346 - L1PB4 LINE L1 -3588 3260 3006 * 2240 248 55 21 chr2 160332214 160333150 -92923433 - L1PB4 LINE L1 -4463 2385 1347 229 408 17 21 chr2 160333609 160333842 -92922741 - L1PB4 LINE L1 -5867 982 751 412 363 68 60 chr2 160334027 160334542 -92922041 - L1PB4 LINE L1 -6321 528 10 1706 182 14 28 chr2 160334562 160334914 -92921669 + MER7A DNA MER2_type 2 346 0 763 228 67 5 chr2 160334974 160335167 -92921416 + MER3 DNA MER1_type 1 205 -4 1434 257 30 11 chr2 160335325 160335850 -92920733 - L1M4 LINE L1 -869 5277 4743 6297 207 77 22 chr2 160335999 160336105 -92920478 - L1MA7 LINE L1 0 6495 6396 1881 191 98 13 chr2 160336105 160336278 -92920305 + MSTB1 LTR MaLR 1 158 -274 221 0 35 0 chr2 160336278 160336307 -92920276 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1881 191 98 13 chr2 160336307 160336531 -92920052 + MSTB1 LTR MaLR 158 432 0 6297 207 77 22 chr2 160336531 160336577 -92920006 - L1MA7 LINE L1 -99 6396 6354 2232 112 10 0 chr2 160336577 160336882 -92919701 + AluSc SINE Alu 1 308 -1 6297 207 77 22 chr2 160336882 160339447 -92917136 - L1MA7 LINE L1 -141 6354 3630 180 0 0 0 chr2 160339447 160339467 -92917116 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2963 73 59 7 chr2 160339503 160339543 -92917040 - MLT2A1 LTR ERVL 0 444 408 531 0 0 0 chr2 160339543 160339602 -92916981 + (TA)n Simple_repeat Simple_repeat 2 60 0 * 636 26 0 0 chr2 160339601 160339679 -92916904 + (GA)n Simple_repeat Simple_repeat 2 79 0 2963 73 59 7 chr2 160339602 160340060 -92916523 - MLT2A1 LTR ERVL -36 408 1 42638 83 10 4 chr2 160340060 160344544 -92912039 - HERVL-A1-A1 LTR ERVL 0 5654 1198 233 73 0 24 chr2 160344544 160344585 -92911998 + (TTA)n Simple_repeat Simple_repeat 3 42 0 778 30 0 40 chr2 160344585 160344686 -92911897 - L1PA4 LINE L1 -18 6137 6041 1980 153 0 0 chr2 160344690 160344985 -92911598 - AluSx SINE Alu -17 295 1 42638 83 10 4 chr2 160344985 160346115 -92910468 - HERVL-A1-A1 LTR ERVL -4458 1196 1 3067 95 2 20 chr2 160346115 160346567 -92910016 - MLT2A1 LTR ERVL 0 444 1 2301 117 15 0 chr2 160346567 160346909 -92909674 - L1PB1 LINE L1 -30 6121 5775 1143 194 4 4 chr2 160346896 160347144 -92909439 + L1 LINE L1 4785 5032 -1114 * 4732 267 36 66 chr2 160347152 160349332 -92907251 - L1MA7 LINE L1 -3374 2976 1267 192 40 0 0 chr2 160349332 160349357 -92907226 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 4732 267 36 66 chr2 160349357 160350587 -92905996 - L1MA7 LINE L1 -5083 1267 2 1263 235 51 90 chr2 160350633 160352061 -92904522 - L1M4 LINE L1 -1536 4610 3311 683 261 109 50 chr2 160352075 160352438 -92904145 + L1ME2 LINE L1 1351 1923 -4684 244 294 50 8 chr2 160352654 160352773 -92903810 - Zaphod DNA AcHobo -8 4023 3900 502 236 89 31 chr2 160352774 160352965 -92903618 + L1ME2 LINE L1 5708 5909 -535 776 279 41 33 chr2 160352968 160353314 -92903269 + L1ME2 LINE L1 6106 6614 0 508 300 69 34 chr2 160354212 160354445 -92902138 + MIR SINE MIR 12 252 -10 286 310 62 9 chr2 160354589 160354702 -92901881 + L2 LINE L2 3191 3309 -4 2460 61 0 0 chr2 160355618 160355928 -92900655 + AluY SINE Alu 1 310 -1 250 253 0 63 chr2 160356948 160357043 -92899540 + L1MC4 LINE L1 6614 6702 -1340 221 282 12 12 chr2 160357068 160357153 -92899430 + (TA)n Simple_repeat Simple_repeat 1 85 0 26 50 0 0 chr2 160358874 160358914 -92897669 + AT_rich Low_complexity Low_complexity 1 40 0 790 336 39 11 chr2 160359066 160359447 -92897136 - ERVL LTR ERVL -1766 3998 3607 457 302 98 19 chr2 160359447 160359662 -92896921 - LTR33 LTR ERVL -289 232 1 23 0 0 0 chr2 160359697 160359720 -92896863 + AT_rich Low_complexity Low_complexity 1 23 0 2030 162 34 41 chr2 160360933 160361487 -92895096 - MLT2A2 LTR ERVL 0 554 1 386 217 67 0 chr2 160361641 160361761 -92894822 - L1ME4a LINE L1 -223 5898 5771 1756 137 23 52 chr2 160361868 160362175 -92894408 + AluSx SINE Alu 1 298 -14 21 0 0 0 chr2 160362516 160362537 -92894046 + AT_rich Low_complexity Low_complexity 1 21 0 459 0 0 0 chr2 160362799 160362850 -92893733 + (TA)n Simple_repeat Simple_repeat 1 51 0 712 280 116 30 chr2 160363059 160363462 -92893121 - MLT1J2 LTR MaLR 0 450 6 448 268 18 29 chr2 160363747 160363961 -92892622 + L1MC4a LINE L1 5667 5819 -302 1861 135 24 0 chr2 160363974 160364271 -92892312 + AluSq SINE Alu 1 304 -9 207 173 0 0 chr2 160364423 160364475 -92892108 + CT-rich Low_complexity Low_complexity 2 53 0 23 33 0 0 chr2 160364495 160364525 -92892058 + AT_rich Low_complexity Low_complexity 1 30 0 718 222 0 36 chr2 160364945 160365112 -92891471 + FRAM SINE Alu 1 161 -5 23 33 0 0 chr2 160365879 160365909 -92890674 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr2 160366000 160366022 -92890561 + AT_rich Low_complexity Low_complexity 1 22 0 225 0 0 0 chr2 160366567 160366592 -92889991 + (CA)n Simple_repeat Simple_repeat 2 26 0 1071 239 48 95 chr2 160367075 160367644 -92888939 + MER34 LTR ERV1 1 542 0 181 390 92 20 chr2 160368117 160368366 -92888217 - L3 LINE CR1 -188 1389 1123 288 0 0 0 chr2 160368886 160368918 -92887665 + (CA)n Simple_repeat Simple_repeat 2 33 0 4016 155 44 6 chr2 160370096 160370820 -92885763 - Tigger3(Golem) DNA MER2_type 0 3029 2278 451 208 0 0 chr2 160370812 160370889 -92885694 - Tigger3(Golem) DNA MER2_type -2922 107 31 * 2284 113 3 0 chr2 160371532 160371842 -92884741 + AluSq SINE Alu 1 311 -2 189 213 0 0 chr2 160372085 160372132 -92884451 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 1771 168 23 49 chr2 160372285 160372631 -92883952 - MER1B DNA MER1_type 0 337 1 2391 89 0 13 chr2 160372840 160373154 -92883429 + AluSx SINE Alu 2 311 -1 24 67 0 0 chr2 160373355 160373400 -92883183 + AT_rich Low_complexity Low_complexity 1 45 0 32 43 0 0 chr2 160374108 160374154 -92882429 + AT_rich Low_complexity Low_complexity 1 46 0 324 130 0 0 chr2 160374315 160374384 -92882199 + (TCTA)n Simple_repeat Simple_repeat 4 72 0 45 34 0 0 chr2 160374392 160374451 -92882132 + AT_rich Low_complexity Low_complexity 1 59 0 209 254 15 30 chr2 160375349 160375416 -92881167 + (TATG)n Simple_repeat Simple_repeat 4 69 0 285 146 0 0 chr2 160375416 160375464 -92881119 + (CA)n Simple_repeat Simple_repeat 2 49 0 934 188 37 41 chr2 160375707 160375780 -92880803 - L1MB2 LINE L1 -11 6160 6088 1050 268 18 67 chr2 160375780 160376347 -92880236 + MER34 LTR ERV1 1 539 -3 934 188 37 41 chr2 160376347 160376491 -92880092 - L1MB2 LINE L1 -83 6088 5944 211 211 21 0 chr2 160376572 160376667 -92879916 + (TA)n Simple_repeat Simple_repeat 1 97 0 43623 42 1 3 chr2 160377184 160383346 -92873237 - L1PA3 LINE L1 -2 6153 4 23 68 0 0 chr2 160383482 160383526 -92873057 + AT_rich Low_complexity Low_complexity 1 44 0 300 27 0 0 chr2 160384195 160384232 -92872351 + (TG)n Simple_repeat Simple_repeat 2 38 0 453 316 97 26 chr2 160385733 160385961 -92870622 - MIR SINE MIR -7 255 12 2217 278 69 111 chr2 160386220 160386652 -92869931 + L2 LINE L2 1189 1637 -1677 713 146 0 0 chr2 160386652 160386755 -92869828 - FLAM_A SINE Alu -18 124 22 2217 278 69 111 chr2 160386755 160387733 -92868850 + L2 LINE L2 1637 2638 -676 209 309 0 85 chr2 160387783 160387877 -92868706 + L2 LINE L2 2651 2736 -578 387 258 31 10 chr2 160387905 160388002 -92868581 + L2 LINE L2 2907 3005 -308 925 40 80 8 chr2 160388015 160388140 -92868443 + MER85 DNA T2_type 6 139 0 2076 114 7 10 chr2 160388367 160388699 -92867884 - AluSx SINE Alu 0 312 1 215 143 0 0 chr2 160388734 160388769 -92867814 + L2 LINE L2 3275 3309 -4 288 288 79 43 chr2 160389142 160389281 -92867302 - MIR SINE MIR -12 250 107 2297 74 7 3 chr2 160391048 160391344 -92865239 - AluY SINE Alu -13 298 2 216 318 0 15 chr2 160392112 160392178 -92864405 - MIR SINE MIR -58 150 86 2212 36 0 21 chr2 160392240 160392521 -92864062 - L1PA4 LINE L1 0 6155 5881 1852 30 0 0 chr2 160392521 160392757 -92863826 + L1P LINE L1 3151 3386 -2760 248 341 77 35 chr2 160393071 160393241 -92863342 + MIR3 SINE MIR 19 195 -13 22 88 0 0 chr2 160394813 160394870 -92861713 + AT_rich Low_complexity Low_complexity 1 57 0 1994 149 0 0 chr2 160395387 160395675 -92860908 + AluSx SINE Alu 1 288 -24 6052 40 0 0 chr2 160395675 160396399 -92860184 + L1PA5 LINE L1 5426 6149 -5 269 351 52 13 chr2 160396425 160396579 -92860004 - L2 LINE L2 -12 3301 3142 1933 207 8 16 chr2 160397439 160397749 -92858834 - MLT2D LTR ERVL -50 364 56 1905 158 19 84 chr2 160397749 160397817 -92858766 - MSTB1 LTR MaLR 0 432 361 2035 125 3 31 chr2 160397817 160398136 -92858447 + AluSg SINE Alu 1 310 0 1905 158 19 84 chr2 160398136 160398529 -92858054 - MSTB1 LTR MaLR -71 361 1 1933 207 8 16 chr2 160398529 160398585 -92857998 - MLT2D LTR ERVL -358 56 1 584 244 0 30 chr2 160398599 160398734 -92857849 + MER63A DNA MER1_type 80 210 0 685 348 13 40 chr2 160398748 160399047 -92857536 - LTR16A LTR ERVL -144 306 16 1632 141 4 4 chr2 160399398 160399646 -92856937 - MLT2B3 LTR ERVL -306 248 1 248 243 14 27 chr2 160399901 160399975 -92856608 + MIR SINE MIR 134 206 -56 339 305 20 37 chr2 160400684 160400901 -92855682 - MIR SINE MIR -50 212 5 321 26 0 0 chr2 160401233 160401271 -92855312 + (CA)n Simple_repeat Simple_repeat 1 38 0 22 0 0 0 chr2 160401406 160401428 -92855155 + AT_rich Low_complexity Low_complexity 1 22 0 2564 166 59 44 chr2 160401433 160402046 -92854537 - L1MA4 LINE L1 0 6300 5679 * 4118 151 34 65 chr2 160402038 160403333 -92853250 + L1MA4 LINE L1 4441 5671 -629 1031 237 151 19 chr2 160404834 160405264 -92851319 - Charlie4a DNA MER1_type -2 506 20 1945 70 85 0 chr2 160405505 160405816 -92850767 - AluY SINE Alu 0 333 1 24 32 0 0 chr2 160405822 160405853 -92850730 + AT_rich Low_complexity Low_complexity 1 31 0 486 252 0 49 chr2 160406178 160406321 -92850262 + MER5A DNA MER1_type 9 144 -45 2402 135 70 68 chr2 160406448 160407003 -92849580 + L1MC2 LINE L1 5776 6331 -13 228 233 0 0 chr2 160407005 160407048 -92849535 + (CATA)n Simple_repeat Simple_repeat 2 44 0 310 303 83 28 chr2 160407077 160407222 -92849361 + MER102b DNA MER1_type 164 316 -25 1742 18 18 9 chr2 160407617 160407837 -92848746 + L1PA4 LINE L1 5929 6150 -5 207 298 0 0 chr2 160408553 160408600 -92847983 + L2 LINE L2 3267 3313 0 180 0 0 0 chr2 160409089 160409109 -92847474 + (A)n Simple_repeat Simple_repeat 1 20 0 30 59 0 0 chr2 160409544 160409595 -92846988 + AT_rich Low_complexity Low_complexity 1 51 0 350 148 0 33 chr2 160410134 160410195 -92846388 + Tigger2 DNA MER2_type 2 60 -2658 682 265 7 7 chr2 160410259 160410410 -92846173 - MER8 DNA MER2_type -87 152 2 30 45 0 0 chr2 160411027 160411071 -92845512 + AT_rich Low_complexity Low_complexity 1 44 0 421 368 38 0 chr2 160411286 160411495 -92845088 - MIR SINE MIR -11 251 35 328 200 80 0 chr2 160411797 160411897 -92844686 - Charlie1a DNA MER1_type -41 1414 1307 246 126 81 11 chr2 160411902 160411989 -92844594 + (TA)n Simple_repeat Simple_repeat 2 94 0 416 213 21 11 chr2 160412025 160412119 -92844464 + AluJ/FLAM SINE Alu 1 95 -217 2883 209 43 26 chr2 160412122 160412696 -92843887 - L1M4c LINE L1 -2324 4058 3464 1852 154 3 13 chr2 160412696 160413001 -92843582 + AluJo SINE Alu 3 304 -8 2883 209 43 26 chr2 160413001 160413235 -92843348 - L1M4c LINE L1 -2918 3464 3236 338 190 0 0 chr2 160413235 160413293 -92843290 - FLAM SINE Alu -20 113 56 38 51 0 0 chr2 160413323 160413382 -92843201 + AT_rich Low_complexity Low_complexity 1 59 0 499 285 94 3 chr2 160413403 160413833 -92842750 - L1M4c LINE L1 -3724 2658 2183 662 219 22 4 chr2 160413833 160414052 -92842531 - MSTB1 LTR MaLR 0 432 116 2187 289 38 13 chr2 160414142 160415034 -92841549 - L1M4c LINE L1 -4512 1872 971 2030 237 18 43 chr2 160415047 160415705 -92840878 - Charlie1a DNA MER1_type -483 972 331 731 169 58 7 chr2 160415731 160415885 -92840698 - Charlie1a DNA MER1_type -1220 235 74 22 0 0 0 chr2 160416485 160416507 -92840076 + AT_rich Low_complexity Low_complexity 1 22 0 405 0 0 0 chr2 160416634 160416679 -92839904 + (CA)n Simple_repeat Simple_repeat 2 46 0 306 0 0 0 chr2 160417279 160417313 -92839270 + (TC)n Simple_repeat Simple_repeat 1 34 0 241 320 68 34 chr2 160418130 160418146 -92838437 + MIR SINE MIR 66 80 -182 468 71 129 0 chr2 160418146 160418216 -92838367 + MADE1 DNA Mariner 2 80 0 241 320 68 34 chr2 160418216 160418346 -92838237 + MIR SINE MIR 80 217 -45 1050 207 80 88 chr2 160418542 160418919 -92837664 + MLT1A2 LTR MaLR 1 374 0 1171 171 72 13 chr2 160420020 160420332 -92836251 - MER33 DNA MER1_type -28 296 1 218 205 0 0 chr2 160420504 160420543 -92836040 + (CA)n Simple_repeat Simple_repeat 1 39 0 3848 125 35 63 chr2 160420905 160421713 -92834870 - LTR1 LTR ERV1 0 785 1 28 48 0 0 chr2 160422443 160422485 -92834098 + AT_rich Low_complexity Low_complexity 1 42 0 792 260 8 70 chr2 160423017 160423259 -92833324 + MIR SINE MIR 36 262 0 489 303 39 39 chr2 160423288 160423466 -92833117 + MER5B DNA MER1_type 1 178 0 618 268 81 53 chr2 160423913 160424124 -92832459 - MIR SINE MIR -8 254 34 1668 91 0 4 chr2 160424124 160424354 -92832229 - L1PA8 LINE L1 -2 6170 5942 618 268 81 53 chr2 160424354 160424388 -92832195 - MIR SINE MIR -228 34 2 285 289 106 33 chr2 160425265 160425445 -92831138 + MLT1L LTR MaLR 186 378 -237 198 304 0 18 chr2 160426110 160426166 -92830417 - L3 LINE CR1 -72 1505 1451 22 35 0 0 chr2 160426313 160426342 -92830241 + AT_rich Low_complexity Low_complexity 1 29 0 708 98 0 0 chr2 160426408 160426510 -92830073 + AluSp/q SINE Alu 211 312 -1 465 307 65 27 chr2 160426748 160427318 -92829265 + L1ME LINE L1 4942 5535 -635 267 122 0 0 chr2 160427591 160427640 -92828943 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 566 112 10 10 chr2 160427651 160427749 -92828834 - L1MB4 LINE L1 0 6180 6083 273 230 59 66 chr2 160427932 160428084 -92828499 + HAL1b LINE L1 754 904 -444 24 32 0 0 chr2 160428484 160428515 -92828068 + AT_rich Low_complexity Low_complexity 1 31 0 1338 185 30 104 chr2 160429695 160430089 -92826494 - MLT1A1 LTR MaLR 0 365 1 268 329 40 33 chr2 160432078 160432230 -92824353 - MER5A DNA MER1_type 0 189 37 240 59 0 0 chr2 160432721 160432755 -92823828 + (TAGA)n Simple_repeat Simple_repeat 4 37 0 576 336 170 33 chr2 160432847 160433681 -92822902 + L2 LINE L2 2356 3312 -1 239 330 129 21 chr2 160433788 160434021 -92822562 + L2 LINE L2 2626 2883 -431 225 154 0 0 chr2 160434274 160434313 -92822270 + (TGGA)n Simple_repeat Simple_repeat 3 41 0 634 224 82 0 chr2 160434611 160434781 -92821802 + MER33 DNA MER1_type 18 201 -123 1767 143 10 24 chr2 160434793 160435086 -92821497 - THE1B LTR MaLR 0 364 76 2117 84 3 17 chr2 160435255 160435565 -92821018 - AluY SINE Alu 0 306 1 2037 104 43 7 chr2 160435777 160436076 -92820507 + AluSx SINE Alu 1 310 -2 22 0 0 0 chr2 160436326 160436348 -92820235 + AT_rich Low_complexity Low_complexity 1 22 0 334 188 286 9 chr2 160436719 160436831 -92819752 + MIR SINE MIR 110 252 -10 22 35 0 0 chr2 160437621 160437650 -92818933 + AT_rich Low_complexity Low_complexity 1 29 0 423 38 0 0 chr2 160437881 160437934 -92818649 + (TG)n Simple_repeat Simple_repeat 2 54 0 3856 150 36 1 chr2 160438991 160439716 -92816867 - L1MA7 LINE L1 -4 6287 5538 1370 338 126 20 chr2 160439728 160440377 -92816206 - L2 LINE L2 -379 2935 2356 1583 126 92 95 chr2 160440377 160440609 -92815974 - MER7A DNA MER2_type -2692 346 116 2356 99 0 3 chr2 160440609 160440923 -92815660 + AluSp SINE Alu 1 313 0 1583 126 92 95 chr2 160440923 160441039 -92815544 - MER7A DNA MER2_type -2922 116 1 1370 338 126 20 chr2 160441039 160441489 -92815094 - L2 LINE L2 -958 2356 1720 2235 96 3 0 chr2 160441516 160441808 -92814775 - AluSx SINE Alu -19 293 1 342 269 23 0 chr2 160441827 160441998 -92814585 + CT-rich Low_complexity Low_complexity 6 180 0 1362 169 90 0 chr2 160442377 160442644 -92813939 - AluJb SINE Alu -21 291 1 2162 131 35 11 chr2 160443732 160444098 -92812485 + THE1C LTR MaLR 1 375 0 762 298 83 34 chr2 160444120 160444529 -92812054 + MLT1K LTR MaLR 143 571 -17 218 370 73 21 chr2 160444557 160444749 -92811834 + L2 LINE L2 2659 2860 -454 48 53 0 0 chr2 160445221 160445297 -92811286 + AT_rich Low_complexity Low_complexity 1 76 0 22 35 0 0 chr2 160445969 160445998 -92810585 + AT_rich Low_complexity Low_complexity 1 29 0 1301 190 82 18 chr2 160446067 160446346 -92810237 - AluJo SINE Alu -5 307 11 356 300 87 43 chr2 160447683 160447913 -92808670 + L2 LINE L2 1712 1951 -1363 843 268 29 12 chr2 160448437 160448680 -92807903 - MIR SINE MIR 0 262 16 521 232 54 18 chr2 160449253 160449421 -92807162 - MER69A DNA AcHobo -3 174 1 21 36 0 0 chr2 160452505 160452533 -92804050 + AT_rich Low_complexity Low_complexity 1 28 0 1719 106 4 0 chr2 160452703 160452938 -92803645 - AluSp SINE Alu 0 313 78 422 278 88 10 chr2 160453396 160453590 -92802993 + L1ME2 LINE L1 5941 6149 -15 589 305 139 45 chr2 160453730 160454350 -92802233 + L1MC/D LINE L1 4670 5347 -799 754 11 21 0 chr2 160454366 160454461 -92802122 + (TAGA)n Simple_repeat Simple_repeat 2 98 0 1153 264 19 19 chr2 160454496 160454814 -92801769 + L1MC/D LINE L1 5376 5693 -2115 3207 145 57 27 chr2 160454847 160455480 -92801103 - MER39B LTR ERV1 -1 652 1 576 191 79 7 chr2 160455534 160455686 -92800897 + L1MC4 LINE L1 7354 7516 -526 28 0 0 0 chr2 160455886 160455914 -92800669 + AT_rich Low_complexity Low_complexity 1 28 0 263 297 232 0 chr2 160456400 160456538 -92800045 + MER91A DNA MER1_type 10 179 -17 3042 48 0 20 chr2 160456594 160456992 -92799591 - L1PA4 LINE L1 0 6155 5766 3605 102 0 8 chr2 160457032 160457549 -92799034 + MER75 DNA T2_type 1 513 -1 2246 176 47 9 chr2 160457783 160458227 -92798356 - LOR1b LTR ERV1 0 461 1 32 0 0 0 chr2 160458614 160458646 -92797937 + AT_rich Low_complexity Low_complexity 1 32 0 228 371 159 18 chr2 160458964 160459247 -92797336 - L2 LINE L2 -343 2971 2649 22 80 0 0 chr2 160459905 160459955 -92796628 + AT_rich Low_complexity Low_complexity 1 50 0 639 62 0 0 chr2 160460993 160461073 -92795510 + MADE1 DNA Mariner 1 80 0 504 180 125 0 chr2 160461188 160461310 -92795273 - MIR SINE MIR -27 235 100 189 0 0 0 chr2 160461311 160461332 -92795251 + (GA)n Simple_repeat Simple_repeat 2 22 0 342 306 139 0 chr2 160461901 160462009 -92794574 + MIR SINE MIR 32 154 -108 1696 161 13 28 chr2 160462015 160462332 -92794251 + AluJo SINE Alu 1 312 0 447 275 161 15 chr2 160462382 160462655 -92793928 - MER110 LTR ERV1 -6 485 173 197 347 0 13 chr2 160462860 160462935 -92793648 + MIR SINE MIR 186 259 -3 23 33 0 0 chr2 160463549 160463579 -92793004 + AT_rich Low_complexity Low_complexity 1 30 0 203 365 47 0 chr2 160464028 160464113 -92792470 - L2 LINE L2 -1 3271 3183 25 0 0 0 chr2 160465279 160465304 -92791279 + AT_rich Low_complexity Low_complexity 1 25 0 508 331 12 6 chr2 160465585 160465754 -92790829 + MER5B DNA MER1_type 7 176 -2 182 351 18 0 chr2 160466400 160466457 -92790126 + MIR3 SINE MIR 133 190 -18 213 368 0 0 chr2 160466516 160466592 -92789991 - MIR3 SINE MIR -30 178 103 205 29 59 0 chr2 160466783 160466817 -92789766 + (TA)n Simple_repeat Simple_repeat 1 36 0 931 289 14 7 chr2 160466985 160467262 -92789321 + HsTC2 DNA Tc2 144 422 -1476 362 333 154 0 chr2 160467264 160467420 -92789163 + MER5A DNA MER1_type 7 186 -3 529 269 113 5 chr2 160467423 160467609 -92788974 + HsTC2 DNA Tc2 410 615 -1283 410 228 76 60 chr2 160467610 160467794 -92788789 + HsTC2 DNA Tc2 1712 1898 0 1507 129 52 18 chr2 160467959 160468245 -92788338 - L1MA9 LINE L1 0 6312 6017 228 73 73 24 chr2 160469422 160469463 -92787120 + L1PA6 LINE L1 6026 6068 -86 398 220 88 0 chr2 160469649 160469740 -92786843 + MER5A DNA MER1_type 14 112 -77 203 147 29 0 chr2 160469732 160469766 -92786817 - MER5A DNA MER1_type -114 75 41 * 2863 142 83 32 chr2 160469766 160470329 -92786254 - LTR1 LTR ERV1 0 785 194 923 128 123 68 chr2 160470369 160470604 -92785979 - LTR1 LTR ERV1 -527 258 11 252 22 43 22 chr2 160471473 160471519 -92785064 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 267 206 76 87 chr2 160472486 160472578 -92784005 - MIR SINE MIR -79 183 93 21 0 0 0 chr2 160472730 160472751 -92783832 + AT_rich Low_complexity Low_complexity 1 21 0 1735 133 61 0 chr2 160474104 160474368 -92782215 + AluSx SINE Alu 1 280 -32 387 0 0 0 chr2 160474369 160474412 -92782171 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 193 263 18 0 chr2 160475483 160475540 -92781043 - L2 LINE L2 0 3272 3215 771 193 176 0 chr2 160476039 160476215 -92780368 - MER6B DNA MER2_type -3 207 1 24 32 0 0 chr2 160476288 160476319 -92780264 + AT_rich Low_complexity Low_complexity 1 31 0 742 275 47 4 chr2 160477784 160478020 -92778563 + Charlie8 DNA MER1_type 3 248 -2169 21 57 0 0 chr2 160481257 160481292 -92775291 + AT_rich Low_complexity Low_complexity 1 35 0 2207 74 0 3 chr2 160481594 160481920 -92774663 - AluY SINE Alu 0 325 1 536 0 16 0 chr2 160481989 160482053 -92774530 + (TAGA)n Simple_repeat Simple_repeat 2 66 0 288 77 0 0 chr2 160482053 160482092 -92774491 + (GGAGA)n Simple_repeat Simple_repeat 5 43 0 414 237 108 17 chr2 160482312 160482507 -92774076 - MIR SINE MIR -1 261 12 384 245 163 0 chr2 160482781 160482879 -92773704 + FLAM_A SINE Alu 2 115 -18 1786 178 0 13 chr2 160485034 160485338 -92771245 + AluJb SINE Alu 1 300 -12 284 327 0 9 chr2 160485922 160486032 -92770551 - MIR SINE MIR -3 259 151 29 0 0 0 chr2 160486399 160486428 -92770155 + AT_rich Low_complexity Low_complexity 1 29 0 411 267 22 39 chr2 160487165 160487345 -92769238 + MER5B DNA MER1_type 1 177 -1 29 60 0 0 chr2 160487791 160487841 -92768742 + AT_rich Low_complexity Low_complexity 1 50 0 36 40 0 0 chr2 160488970 160489020 -92767563 + AT_rich Low_complexity Low_complexity 1 50 0 1578 175 13 25 chr2 160489136 160489450 -92767133 - AluJb SINE Alu -2 310 1 229 322 107 33 chr2 160490862 160490983 -92765600 - L2 LINE L2 -2 3270 3141 294 299 0 0 chr2 160491457 160491534 -92765049 - MIR SINE MIR -180 82 6 488 251 56 34 chr2 160491877 160492056 -92764527 - L2 LINE L2 -34 3279 3097 599 304 47 9 chr2 160492424 160492638 -92763945 + MIR SINE MIR 13 234 -28 24 0 0 0 chr2 160492874 160492898 -92763685 + AT_rich Low_complexity Low_complexity 1 24 0 1274 261 109 26 chr2 160493063 160493557 -92763026 + L1ME1 LINE L1 57 591 -5805 5296 235 56 88 chr2 160493558 160493606 -92762977 + L1ME1 LINE L1 2919 2967 -3268 1900 130 9 51 chr2 160493606 160493921 -92762662 + AluSx SINE Alu 3 304 -8 5296 235 56 88 chr2 160493921 160494681 -92761902 + L1ME1 LINE L1 2967 3750 -2485 2182 116 0 0 chr2 160494681 160494984 -92761599 + AluSq SINE Alu 1 303 -10 5296 235 56 88 chr2 160494984 160496622 -92759961 + L1ME1 LINE L1 3750 5270 -965 2155 95 3 0 chr2 160496622 160496930 -92759653 + AluSq SINE Alu 1 309 0 5296 235 56 88 chr2 160496930 160497861 -92758722 + L1ME1 LINE L1 5270 6230 -5 219 36 0 0 chr2 160497889 160497917 -92758666 + (GA)n Simple_repeat Simple_repeat 2 29 0 180 237 43 65 chr2 160498048 160498141 -92758442 + MIR SINE MIR 145 235 -27 303 71 0 0 chr2 160499148 160499190 -92757393 + (TA)n Simple_repeat Simple_repeat 2 43 0 218 363 33 0 chr2 160500712 160500803 -92755780 - L2 LINE L2 -240 3032 2939 472 301 32 85 chr2 160502314 160502630 -92753953 - L2 LINE L2 -92 3221 2923 1061 173 139 0 chr2 160502785 160503080 -92753503 + MER7A DNA MER2_type 1 333 -4 26 30 0 0 chr2 160503156 160503189 -92753394 + AT_rich Low_complexity Low_complexity 1 33 0 1410 97 3 2 chr2 160503689 160504014 -92752569 + THE1C LTR MaLR 1 375 0 9381 118 39 58 chr2 160504014 160505476 -92751107 + THE1C-int LTR MaLR 1 1433 -147 1811 153 6 50 chr2 160505476 160505796 -92750787 - AluSx SINE Alu -2 310 5 9381 118 39 58 chr2 160505796 160505931 -92750652 + THE1C-int LTR MaLR 1433 1569 -11 2469 110 19 11 chr2 160505935 160506307 -92750276 + THE1C LTR MaLR 1 375 0 23 68 0 0 chr2 160508179 160508223 -92748360 + AT_rich Low_complexity Low_complexity 1 44 0 249 370 110 6 chr2 160508384 160508557 -92748026 - MIR SINE MIR -54 208 18 22 0 0 0 chr2 160509055 160509077 -92747506 + AT_rich Low_complexity Low_complexity 1 22 0 242 271 57 66 chr2 160509544 160509666 -92746917 + L2 LINE L2 3190 3310 -3 568 14 0 0 chr2 160512790 160512859 -92743724 + AluY SINE Alu 229 297 -13 301 327 10 0 chr2 160512934 160513035 -92743548 + (CATA)n Simple_repeat Simple_repeat 2 103 0 6901 185 39 38 chr2 160513250 160513785 -92742798 - L1MA5 LINE L1 -1 6885 6352 279 0 0 0 chr2 160513785 160513816 -92742767 + (CA)n Simple_repeat Simple_repeat 2 32 0 6901 185 39 38 chr2 160513816 160515723 -92740860 - L1MA5 LINE L1 -534 6352 4452 279 192 0 0 chr2 160515721 160515773 -92740810 + L1M1 LINE L1 2964 3015 -4550 * 2084 211 45 10 chr2 160516754 160517262 -92739321 - L1MA5 LINE L1 -4711 1942 1417 2390 117 17 8 chr2 160517262 160517621 -92738962 - THE1B LTR MaLR 0 364 3 6240 126 15 18 chr2 160517623 160518582 -92738001 - THE1B-int LTR MaLR 0 1580 625 2607 110 3 0 chr2 160518593 160518956 -92737627 - THE1B LTR MaLR 0 364 1 1953 294 12 2 chr2 160518958 160519438 -92737145 - L1MA5 LINE L1 -5234 1419 935 276 273 34 34 chr2 160519466 160519554 -92737029 - L1MA5 LINE L1 -6287 366 279 232 279 0 16 chr2 160519598 160519659 -92736924 - L1MA5 LINE L1 -6316 337 278 440 305 37 37 chr2 160519706 160519896 -92736687 - L1M3de LINE L1 -5665 988 799 5026 99 58 48 chr2 160519933 160521127 -92735456 - pTR5 LTR ERV1 0 2606 1520 391 285 50 60 chr2 160521178 160521542 -92735041 - L1M3de LINE L1 -5558 1095 565 313 304 13 0 chr2 160521599 160521678 -92734905 + L2 LINE L2 2552 2631 -683 384 285 84 84 chr2 160521722 160521936 -92734647 - MIR SINE MIR -48 214 1 318 335 84 40 chr2 160522746 160522997 -92733586 - MIR SINE MIR 0 262 1 1626 201 54 82 chr2 160523746 160524208 -92732375 - MER39 LTR ERV1 0 707 259 233 286 31 41 chr2 160524184 160524282 -92732301 - LTR48B LTR ERV1 -547 97 1 * 1933 132 0 30 chr2 160524603 160524937 -92731646 - AluSx SINE Alu 0 312 1 25 0 0 0 chr2 160526007 160526032 -92730551 + AT_rich Low_complexity Low_complexity 1 25 0 862 46 9 0 chr2 160526037 160526146 -92730437 - L1PA7 LINE L1 -1 6153 6044 665 350 51 17 chr2 160526153 160526612 -92729971 - L2 LINE L2 -262 3051 2553 1059 230 92 48 chr2 160526615 160526950 -92729633 + MLT1A2 LTR MaLR 25 374 0 194 275 44 66 chr2 160526968 160527059 -92729524 - L2 LINE L2 -779 2535 2447 582 325 28 0 chr2 160527183 160527395 -92729188 - L2 LINE L2 -942 2372 2155 542 130 62 3 chr2 160527656 160527982 -92728601 + (TA)n Simple_repeat Simple_repeat 1 345 0 547 81 64 17 chr2 160527994 160528166 -92728417 + (TA)n Simple_repeat Simple_repeat 1 180 0 52 58 0 0 chr2 160528266 160528353 -92728230 + AT_rich Low_complexity Low_complexity 1 87 0 249 320 37 65 chr2 160528412 160528706 -92727877 - L2 LINE L2 -1603 1711 1426 2442 46 7 29 chr2 160528720 160529027 -92727556 - AluY SINE Alu -11 300 1 26 0 0 0 chr2 160529155 160529181 -92727402 + AT_rich Low_complexity Low_complexity 1 26 0 2301 111 0 6 chr2 160529352 160529667 -92726916 - AluSp SINE Alu 0 313 1 227 175 35 18 chr2 160529829 160529886 -92726697 + (TATATG)n Simple_repeat Simple_repeat 3 60 0 21 0 0 0 chr2 160531147 160531168 -92725415 + AT_rich Low_complexity Low_complexity 1 21 0 242 226 11 54 chr2 160531316 160531409 -92725174 + L1ME4a LINE L1 5977 6065 -56 1834 187 100 27 chr2 160531790 160532329 -92724254 - MER4E LTR ERV1 0 779 104 3059 151 86 12 chr2 160532329 160532899 -92723684 - LTR9 LTR ERV1 0 612 1 1834 187 100 27 chr2 160532899 160533012 -92723571 - MER4E LTR ERV1 -675 104 1 2089 94 17 0 chr2 160533027 160533315 -92723268 - AluSx SINE Alu -16 296 4 203 278 79 40 chr2 160534238 160534364 -92722219 + L3 LINE CR1 150 280 -1297 213 94 0 0 chr2 160534639 160534671 -92721912 + (CA)n Simple_repeat Simple_repeat 2 33 0 207 0 0 0 chr2 160535407 160535430 -92721153 + (TTA)n Simple_repeat Simple_repeat 2 24 0 2046 58 4 0 chr2 160535430 160535688 -92720895 - L1PA7 LINE L1 -14 6140 5882 3255 167 35 59 chr2 160535696 160536404 -92720179 - LTR8 LTR ERV1 0 691 1 1682 188 148 5 chr2 160538634 160539034 -92717549 - MSTB2 LTR MaLR 0 457 1 212 143 48 0 chr2 160539669 160539711 -92716872 + (CATATA)n Simple_repeat Simple_repeat 3 46 0 285 322 13 4 chr2 160539746 160539970 -92716613 - L1MC/D LINE L1 -342 5822 5648 623 244 120 31 chr2 160539979 160540204 -92716379 + MIR SINE MIR 18 262 0 257 262 58 58 chr2 160540292 160540395 -92716188 - L1MC/D LINE L1 -2182 5626 5524 186 208 0 0 chr2 160540446 160540499 -92716084 + (TA)n Simple_repeat Simple_repeat 1 53 0 9045 35 3 2 chr2 160540511 160541581 -92715002 - MER11C LTR ERVK 0 1071 1 360 298 19 63 chr2 160541619 160541824 -92714759 - L1MC/D LINE L1 -749 5397 5202 225 163 0 0 chr2 160542488 160542537 -92714046 - LTR66 LTR ERVL -172 438 390 502 166 7 26 chr2 160542585 160542736 -92713847 + (TA)n Simple_repeat Simple_repeat 2 149 0 2129 116 0 0 chr2 160542738 160543014 -92713569 - AluSc SINE Alu -31 278 3 2297 161 30 23 chr2 160543703 160544132 -92712451 - MSTB1 LTR MaLR 0 432 1 1797 99 0 8 chr2 160545127 160545369 -92711214 + AluSg SINE Alu 57 296 -14 22 0 0 0 chr2 160545676 160545698 -92710885 + AT_rich Low_complexity Low_complexity 1 22 0 916 186 66 51 chr2 160545778 160546133 -92710450 - MSTB2 LTR MaLR 0 457 8 226 297 223 39 chr2 160546138 160546194 -92710389 + L3 LINE CR1 1168 1212 -365 2182 120 10 0 chr2 160546194 160546495 -92710088 + AluSx SINE Alu 1 304 -8 226 297 223 39 chr2 160546495 160546775 -92709808 + L3 LINE CR1 1212 1566 -11 239 326 82 76 chr2 160546848 160546925 -92709658 + L3 LINE CR1 1345 1420 -157 489 220 30 23 chr2 160546925 160547057 -92709526 - MER94 DNA DNA -1 133 1 239 326 82 76 chr2 160547057 160547163 -92709420 + L3 LINE CR1 1420 1529 -48 23 0 0 0 chr2 160547196 160547219 -92709364 + AT_rich Low_complexity Low_complexity 1 23 0 2206 125 3 0 chr2 160547709 160548004 -92708579 + AluSx SINE Alu 3 298 -14 207 246 0 0 chr2 160548132 160548189 -92708394 + (CA)n Simple_repeat Simple_repeat 2 58 0 2075 128 17 0 chr2 160548647 160548943 -92707640 + AluSx SINE Alu 1 301 -11 181 146 42 0 chr2 160549233 160549281 -92707302 + (TA)n Simple_repeat Simple_repeat 2 51 0 535 322 23 0 chr2 160550801 160550972 -92705611 + MIR SINE MIR 75 249 -13 21 0 0 0 chr2 160550974 160550995 -92705588 + AT_rich Low_complexity Low_complexity 1 21 0 270 0 0 0 chr2 160551408 160551438 -92705145 + (T)n Simple_repeat Simple_repeat 1 30 0 1747 255 28 10 chr2 160551943 160552412 -92704171 - MLT1H1 LTR MaLR -1 554 33 706 234 58 13 chr2 160552412 160552566 -92704017 + FRAM SINE Alu 1 160 -16 263 182 0 0 chr2 160552567 160552611 -92703972 - MLT1H1 LTR MaLR -511 44 1 21 71 0 0 chr2 160553221 160553263 -92703320 + AT_rich Low_complexity Low_complexity 1 42 0 245 295 18 36 chr2 160553272 160553384 -92703199 - L1MC4a LINE L1 -1644 6164 6055 499 193 30 37 chr2 160554872 160555007 -92701576 - L1MA3 LINE L1 -1 6304 6171 21 0 0 0 chr2 160555019 160555040 -92701543 + AT_rich Low_complexity Low_complexity 1 21 0 450 176 321 15 chr2 160555142 160555273 -92701310 + MER5A DNA MER1_type 19 189 0 294 226 278 0 chr2 160555304 160555419 -92701164 + MER5A DNA MER1_type 42 188 -1 180 254 55 18 chr2 160555370 160555425 -92701158 + L3 LINE CR1 447 503 -1074 * 735 153 45 40 chr2 160555602 160555778 -92700805 - MER53 DNA DNA -12 177 1 1882 137 34 65 chr2 160556246 160556633 -92699950 + THE1C LTR MaLR 1 375 0 360 296 136 12 chr2 160557538 160557781 -92698802 - L1ME3 LINE L1 -216 5946 5674 438 134 144 21 chr2 160557808 160557905 -92698678 + MER5A DNA MER1_type 4 112 -77 266 278 208 7 chr2 160557926 160558070 -92698513 - L1ME3 LINE L1 -514 5650 5478 246 239 80 31 chr2 160558198 160558361 -92698222 - L1ME3 LINE L1 -773 5373 5203 2126 116 14 0 chr2 160558373 160558666 -92697917 - AluSx SINE Alu -15 297 1 2568 143 9 14 chr2 160558864 160559297 -92697286 + MSTB1 LTR MaLR 2 432 0 1205 210 40 16 chr2 160560608 160560860 -92695723 - AluJo SINE Alu -51 261 4 21 36 0 0 chr2 160561765 160561793 -92694790 + AT_rich Low_complexity Low_complexity 1 28 0 25 65 0 0 chr2 160562592 160562638 -92693945 + AT_rich Low_complexity Low_complexity 1 46 0 22 0 0 0 chr2 160562871 160562893 -92693690 + AT_rich Low_complexity Low_complexity 1 22 0 278 378 130 4 chr2 160563813 160564083 -92692500 + L2 LINE L2 2398 2701 -613 32 57 0 0 chr2 160566259 160566312 -92690271 + AT_rich Low_complexity Low_complexity 1 53 0 22 35 0 0 chr2 160566644 160566673 -92689910 + AT_rich Low_complexity Low_complexity 1 29 0 30 0 0 0 chr2 160566765 160566795 -92689788 + AT_rich Low_complexity Low_complexity 1 30 0 2209 179 38 7 chr2 160566970 160567417 -92689166 - MER65C LTR ERV1 0 461 1 1963 228 80 19 chr2 160567690 160568216 -92688367 - MER74A LTR ERVL 0 558 1 578 233 8 8 chr2 160569532 160569652 -92686931 - FLAM_A SINE Alu -13 120 1 262 200 0 24 chr2 160570152 160570237 -92686346 + (TG)n Simple_repeat Simple_repeat 2 84 0 1785 290 139 31 chr2 160570483 160571550 -92685033 - L2 LINE L2 -1 3312 2119 981 232 79 40 chr2 160571694 160572022 -92684561 + MER58B DNA MER1_type 1 341 0 240 35 0 0 chr2 160572083 160572112 -92684471 + (TG)n Simple_repeat Simple_repeat 1 29 0 272 346 75 8 chr2 160573764 160573897 -92682686 - MIR SINE MIR -56 206 65 724 217 25 12 chr2 160574666 160574827 -92681756 + MER3 DNA MER1_type 5 167 -42 298 340 68 42 chr2 160575292 160575483 -92681100 + MIR SINE MIR 1 196 -66 2213 125 42 31 chr2 160575636 160575996 -92680587 + THE1B LTR MaLR 1 364 0 447 297 55 25 chr2 160576980 160577182 -92679401 - MIR SINE MIR -35 227 20 376 327 146 0 chr2 160577265 160577491 -92679092 - MIR SINE MIR -2 260 2 2101 174 35 33 chr2 160579405 160579955 -92676628 + MLT2A2 LTR ERVL 1 554 0 2628 45 0 0 chr2 160580665 160580976 -92675607 + AluY SINE Alu 1 311 0 711 226 30 57 chr2 160581684 160581914 -92674669 - MIR SINE MIR -13 249 26 483 284 63 31 chr2 160582305 160582527 -92674056 + MIR SINE MIR 20 248 -14 4161 189 53 40 chr2 160582567 160584069 -92672514 - L1MA9 LINE L1 -34 6278 4767 339 192 41 0 chr2 160584576 160584649 -92671934 + MER116 DNA Mariner 5 80 0 260 366 37 55 chr2 160586331 160586495 -92670088 + MIR3 SINE MIR 37 197 -11 256 359 39 0 chr2 160589947 160590050 -92666533 - L2 LINE L2 -8 3305 3199 601 293 80 44 chr2 160590700 160590949 -92665634 + MIR SINE MIR 5 262 0 317 300 53 47 chr2 160591518 160591668 -92664915 + MLT1H LTR MaLR 82 232 -317 216 256 0 0 chr2 160591675 160591718 -92664865 + polypyrimidine Low_complexity Low_complexity 1 43 0 643 245 86 59 chr2 160591731 160592006 -92664577 + MLT1H LTR MaLR 250 610 -14 432 0 0 0 chr2 160593906 160593954 -92662629 + (TTTTG)n Simple_repeat Simple_repeat 1 48 0 1926 124 3 7 chr2 160593954 160594230 -92662353 - AluSx SINE Alu -32 280 6 25 31 0 0 chr2 160595315 160595347 -92661236 + AT_rich Low_complexity Low_complexity 1 32 0 22 35 0 0 chr2 160596331 160596360 -92660223 + AT_rich Low_complexity Low_complexity 1 29 0 242 277 33 68 chr2 160597839 160598044 -92658539 + MIR SINE MIR 17 261 -1 216 0 0 0 chr2 160598261 160598285 -92658298 + (TTG)n Simple_repeat Simple_repeat 2 25 0 215 313 174 9 chr2 160598498 160598613 -92657970 + MIR SINE MIR 2 135 -127 330 140 0 0 chr2 160598815 160598865 -92657718 + MSTC LTR MaLR 3 52 -376 * 600 168 150 0 chr2 160598858 160598971 -92657612 - MSTC LTR MaLR -298 130 1 * 778 214 85 80 chr2 160598971 160599422 -92657161 - MLT1A2 LTR MaLR -16 449 11 1825 304 80 40 chr2 160599470 160600465 -92656118 - L2 LINE L2 -475 2839 1805 253 293 88 75 chr2 160600496 160600643 -92655940 + MER5B DNA MER1_type 29 177 -1 304 357 25 35 chr2 160600645 160600928 -92655655 - L2 LINE L2 -1517 1797 1518 251 321 57 36 chr2 160601717 160601857 -92654726 + L1ME LINE L1 5676 5818 -303 2114 101 7 7 chr2 160604254 160604551 -92652032 - AluY SINE Alu -14 297 1 24 53 0 0 chr2 160605755 160605793 -92650790 + AT_rich Low_complexity Low_complexity 1 38 0 24 0 0 0 chr2 160606158 160606182 -92650401 + AT_rich Low_complexity Low_complexity 1 24 0 218 194 16 0 chr2 160606653 160606715 -92649868 + GA-rich Low_complexity Low_complexity 2 64 0 545 247 164 63 chr2 160606923 160607210 -92649373 - L2 LINE L2 -1 3312 2997 425 191 122 0 chr2 160607890 160608005 -92648578 - L1MA6 LINE L1 -260 6040 5912 471 161 21 0 chr2 160608005 160608098 -92648485 + L1MA6 LINE L1 6204 6298 -2 257 347 167 7 chr2 160609411 160609561 -92647022 - MIR SINE MIR -41 221 48 23 54 0 0 chr2 160609729 160609766 -92646817 + AT_rich Low_complexity Low_complexity 1 37 0 1746 263 134 16 chr2 160609933 160610446 -92646137 - MLT1E LTR MaLR -19 574 1 430 267 119 54 chr2 160610581 160610858 -92645725 + L2 LINE L2 2999 3293 -20 364 333 0 38 chr2 160610870 160611002 -92645581 + MIR3 SINE MIR 15 141 -67 408 309 29 0 chr2 160612497 160612633 -92643950 - MIR SINE MIR -1 261 122 22 0 0 0 chr2 160612934 160612956 -92643627 + AT_rich Low_complexity Low_complexity 1 22 0 189 333 19 0 chr2 160613237 160613291 -92643292 - L2 LINE L2 -9 3263 3209 1532 278 77 34 chr2 160613696 160614383 -92642200 - HsTC2a DNA Tc2 -3 741 25 301 361 67 48 chr2 160614713 160614921 -92641662 + MIR SINE MIR 2 213 -49 3113 129 6 8 chr2 160615350 160615846 -92640737 - LOR1a LTR ERV1 -2 495 1 4946 174 54 17 chr2 160616566 160617898 -92638685 - L1MA7 LINE L1 -3 6288 4908 23 0 0 0 chr2 160617955 160617978 -92638605 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr2 160618219 160618249 -92638334 + AT_rich Low_complexity Low_complexity 1 30 0 1903 123 0 41 chr2 160618380 160618698 -92637885 - AluSx SINE Alu -3 309 5 3066 152 0 8 chr2 160618890 160619391 -92637192 - LOR1a LTR ERV1 0 497 1 3002 97 2 2 chr2 160619498 160619919 -92636664 - L1PA13 LINE L1 -14 6149 5729 526 244 107 12 chr2 160620109 160620277 -92636306 + L2 LINE L2 3118 3301 -12 385 356 56 17 chr2 160620340 160620573 -92636010 - MLT1K LTR MaLR -158 430 189 333 217 12 24 chr2 160620629 160620712 -92635871 + MER5A DNA MER1_type 24 105 -84 310 265 93 93 chr2 160620753 160620904 -92635679 - MLT1K LTR MaLR -435 153 3 272 306 24 0 chr2 160620921 160621006 -92635577 - MIR SINE MIR -16 246 160 1105 322 98 46 chr2 160621057 160621393 -92635190 - L2 LINE L2 -117 3196 2879 2965 127 44 6 chr2 160621393 160621872 -92634711 - LOR1a LTR ERV1 0 497 1 1105 322 98 46 chr2 160621872 160622487 -92634096 - L2 LINE L2 -434 2879 2188 325 259 61 3 chr2 160622579 160622723 -92633860 - MLT1I LTR MaLR -190 219 67 2802 7 0 0 chr2 160623060 160623368 -92633215 + AluYa5 SINE Alu 1 308 -3 698 220 132 0 chr2 160623448 160623630 -92632953 + MER58 DNA MER1_type 1 206 -2214 21 0 0 0 chr2 160624500 160624521 -92632062 + AT_rich Low_complexity Low_complexity 1 21 0 1556 209 43 38 chr2 160625613 160626083 -92630500 - Charlie1b DNA MER1_type -1 522 51 265 203 41 24 chr2 160626163 160626286 -92630297 + (TA)n Simple_repeat Simple_repeat 2 126 0 2142 75 0 14 chr2 160626417 160626697 -92629886 + AluY SINE Alu 1 276 -35 268 294 198 41 chr2 160627873 160628070 -92628513 + MIR SINE MIR 8 235 -27 446 278 84 16 chr2 160628090 160628281 -92628302 - MIR SINE MIR -1 261 58 22 70 0 0 chr2 160628344 160628387 -92628196 + AT_rich Low_complexity Low_complexity 1 43 0 622 215 7 22 chr2 160628400 160628535 -92628048 + FLAM_A SINE Alu 1 133 0 1298 207 31 90 chr2 160628547 160628993 -92627590 - MLT1A1 LTR MaLR 0 365 1 1922 160 3 10 chr2 160632435 160632747 -92623836 + AluSx SINE Alu 1 310 -2 297 256 83 83 chr2 160633109 160633230 -92623353 + MIR SINE MIR 33 153 -55 247 239 0 0 chr2 160634213 160634259 -92622324 + polypurine Low_complexity Low_complexity 3 48 0 314 312 91 65 chr2 160634631 160634728 -92621855 + HAL1b LINE L1 103 196 -1152 1351 142 154 27 chr2 160634728 160634988 -92621595 + AluSx SINE Alu 1 293 -9 314 312 91 65 chr2 160634988 160635352 -92621231 + HAL1b LINE L1 196 576 -772 888 319 105 17 chr2 160635360 160636150 -92620433 + L2 LINE L2 2404 3313 0 378 299 143 47 chr2 160639515 160639899 -92616684 - MLT1L LTR MaLR -12 603 183 213 339 97 16 chr2 160640203 160640327 -92616256 + L2 LINE L2 3180 3313 0 411 21 0 0 chr2 160640576 160640624 -92615959 + (CA)n Simple_repeat Simple_repeat 1 48 0 285 316 15 7 chr2 160640632 160640768 -92615815 + L1MC/D LINE L1 5701 5837 -1971 183 359 94 18 chr2 160641101 160641271 -92615312 + MIR SINE MIR 73 255 -7 387 250 121 7 chr2 160642366 160642506 -92614077 + L2 LINE L2 2221 2376 -938 259 371 42 42 chr2 160642734 160642947 -92613636 + L2 LINE L2 2743 2955 -359 302 345 43 0 chr2 160643259 160643468 -92613115 - L1ME LINE L1 -331 5790 5573 273 370 130 0 chr2 160643516 160643708 -92612875 - MIR SINE MIR -38 224 8 26 30 0 0 chr2 160644249 160644282 -92612301 + AT_rich Low_complexity Low_complexity 1 33 0 712 223 0 0 chr2 160644282 160644412 -92612171 + FLAM_A SINE Alu 1 130 -3 1608 219 34 11 chr2 160645427 160645784 -92610799 - MLT1A1 LTR MaLR 0 365 1 189 0 0 0 chr2 160646546 160646567 -92610016 + (A)n Simple_repeat Simple_repeat 1 21 0 2143 95 0 3 chr2 160646753 160647075 -92609508 - AluSx SINE Alu 0 321 1 1473 257 106 2 chr2 160647539 160647991 -92608592 + MLT1D LTR MaLR 3 501 -4 24 0 0 0 chr2 160648289 160648313 -92608270 + AT_rich Low_complexity Low_complexity 1 24 0 5233 58 1 0 chr2 160652176 160652829 -92603754 - L1PA6 LINE L1 0 6154 5501 235 274 69 29 chr2 160652989 160653091 -92603492 + MLT1F1 LTR MaLR 42 147 -420 1159 227 77 54 chr2 160653091 160653479 -92603104 + L1MC3 LINE L1 7213 7609 -176 403 316 7 26 chr2 160653518 160653670 -92602913 + MIR SINE MIR 20 168 -94 1164 282 110 10 chr2 160653757 160654140 -92602443 + LTR16C LTR ERVL 67 487 -4 1537 186 45 72 chr2 160655210 160655743 -92600840 - MLT1E3 LTR MaLR -1 623 32 246 296 61 23 chr2 160656334 160656466 -92600117 - MIR SINE MIR -1 261 125 21 0 0 0 chr2 160657197 160657218 -92599365 + AT_rich Low_complexity Low_complexity 1 21 0 1373 155 0 4 chr2 160657815 160658041 -92598542 + Tigger1 DNA MER2_type 2 226 -2192 1111 41 95 0 chr2 160658041 160658188 -92598395 - AluY SINE Alu -8 303 143 12977 141 19 17 chr2 160658190 160660366 -92596217 + Tigger1 DNA MER2_type 238 2418 0 2724 91 6 0 chr2 160660907 160661269 -92595314 + THE1B LTR MaLR 1 364 0 1570 183 104 54 chr2 160661712 160662155 -92594428 - MLT1C LTR MaLR 0 467 3 407 200 0 0 chr2 160662320 160662395 -92594188 + MER45A DNA AcHobo 95 169 -9 30 0 0 0 chr2 160662748 160662778 -92593805 + AT_rich Low_complexity Low_complexity 1 30 0 2138 150 48 5 chr2 160663107 160663481 -92593102 + MLT1B LTR MaLR 1 390 0 2094 83 7 0 chr2 160663527 160663805 -92592778 - AluY SINE Alu -15 296 17 1303 157 46 32 chr2 160666161 160666464 -92590119 - AluJo SINE Alu 0 307 1 2201 94 3 3 chr2 160666838 160667135 -92589448 + AluSc SINE Alu 1 297 -12 297 321 28 19 chr2 160667299 160667405 -92589178 - L3b LINE CR1 -88 1495 1389 303 282 68 10 chr2 160667642 160667745 -92588838 - MIR SINE MIR -80 182 74 22 0 0 0 chr2 160669899 160669921 -92586662 + AT_rich Low_complexity Low_complexity 1 22 0 425 248 202 0 chr2 160670265 160670394 -92586189 + MER5A DNA MER1_type 29 183 -6 218 214 366 9 chr2 160670737 160670849 -92585734 - MIR3 SINE MIR -11 197 46 315 299 89 4 chr2 160671101 160671240 -92585343 - MIR SINE MIR -42 220 68 23 0 0 0 chr2 160671865 160671888 -92584695 + AT_rich Low_complexity Low_complexity 1 23 0 758 192 0 0 chr2 160673322 160673452 -92583131 + FLAM_A SINE Alu 1 130 -3 411 261 50 0 chr2 160673876 160673995 -92582588 + L1ME LINE L1 5602 5726 -395 201 272 147 59 chr2 160675058 160675194 -92581389 - L2 LINE L2 -10 3303 3156 225 0 0 0 chr2 160678690 160678715 -92577868 + (A)n Simple_repeat Simple_repeat 1 25 0 22 35 0 0 chr2 160679026 160679055 -92577528 + AT_rich Low_complexity Low_complexity 1 29 0 1128 269 145 12 chr2 160682174 160682601 -92573982 + L2 LINE L2 2374 2857 -457 195 129 0 0 chr2 160682601 160682632 -92573951 + (CA)n Simple_repeat Simple_repeat 2 32 0 350 165 258 0 chr2 160682912 160683009 -92573574 + L2 LINE L2 3191 3312 -1 22 35 0 0 chr2 160683053 160683082 -92573501 + AT_rich Low_complexity Low_complexity 1 29 0 338 348 17 8 chr2 160683435 160683553 -92573030 - MIR3 SINE MIR -31 177 59 1925 129 46 0 chr2 160683644 160683924 -92572659 + AluSx SINE Alu 1 293 -19 272 49 25 74 chr2 160685400 160685481 -92571102 + (TTTTG)n Simple_repeat Simple_repeat 1 77 0 297 128 0 0 chr2 160686250 160686297 -92570286 + (GGGAA)n Simple_repeat Simple_repeat 3 49 0 2568 268 144 42 chr2 160687286 160688507 -92568076 + L2 LINE L2 1959 3313 0 212 349 12 12 chr2 160689435 160689518 -92567065 + MIR SINE MIR 7 89 -173 21 0 0 0 chr2 160690456 160690477 -92566106 + AT_rich Low_complexity Low_complexity 1 21 0 749 75 0 0 chr2 160690477 160690584 -92565999 - L1PA13 LINE L1 -3 6160 6054 237 333 33 25 chr2 160691760 160691880 -92564703 + MLT1K LTR MaLR 126 246 -342 195 329 105 20 chr2 160692194 160692346 -92564237 + MIR SINE MIR 92 256 -6 222 156 0 0 chr2 160693488 160693533 -92563050 + (TG)n Simple_repeat Simple_repeat 2 46 0 1416 206 80 67 chr2 160693848 160694309 -92562274 - MLT1C LTR MaLR 0 467 1 257 330 30 20 chr2 160694981 160695081 -92561502 - MER90 LTR ERV1 -16 559 459 232 283 88 38 chr2 160695550 160695709 -92560874 + MER117 DNA MER1_type 2 168 -29 229 208 0 0 chr2 160695950 160695998 -92560585 + MLT1L LTR MaLR 184 231 -384 272 235 15 15 chr2 160696094 160696162 -92560421 + MLT1K LTR MaLR 504 571 -17 309 396 102 8 chr2 160696198 160696453 -92560130 - L2 LINE L2 -850 2464 2186 402 276 53 0 chr2 160696527 160696679 -92559904 - MER112 DNA MER1_type -100 160 1 472 238 21 111 chr2 160697855 160698090 -92558493 + L1MC5 LINE L1 5682 5895 -1913 491 260 101 34 chr2 160698090 160698298 -92558285 + MLT1G1 LTR MaLR 3 224 -371 2472 290 59 32 chr2 160698304 160699665 -92556918 + HERVL-F LTR ERVL 4299 5756 -8 905 282 128 42 chr2 160699665 160700268 -92556315 + MLT2F LTR ERVL 1 655 -8 185 192 0 19 chr2 160700528 160700580 -92556003 + (TA)n Simple_repeat Simple_repeat 2 52 0 2088 120 3 0 chr2 160700644 160700975 -92555608 + AluSp SINE Alu 2 333 0 29 28 0 0 chr2 160701142 160701178 -92555405 + AT_rich Low_complexity Low_complexity 1 36 0 3511 98 6 2 chr2 160701203 160701713 -92554870 + MER57-int LTR ERV1 4401 4912 -2625 8602 117 24 5 chr2 160701713 160703051 -92553532 - MER57A-int LTR ERV1 -3163 4374 3012 889 130 8 0 chr2 160703051 160703182 -92553401 - MER57A-int LTR ERV1 -4629 2908 2777 * 949 143 14 0 chr2 160703177 160703324 -92553259 - MER57A-int LTR ERV1 -3932 2014 1866 * 3735 152 39 24 chr2 160703323 160703989 -92552594 - MER57A-int LTR ERV1 -5166 2371 1696 * 7956 135 47 4 chr2 160703969 160705186 -92551397 - MER57A-int LTR ERV1 -6268 1269 1 2187 166 18 0 chr2 160705190 160705582 -92551001 - MER57A LTR ERV1 -4 399 1 1010 216 65 119 chr2 160705591 160706130 -92550453 + L1MC5 LINE L1 6673 7240 -721 1604 148 183 30 chr2 160706130 160706501 -92550082 + MSTA LTR MaLR 1 428 0 7819 138 80 50 chr2 160706503 160708034 -92548549 + MSTA-int LTR MaLR 3 1580 0 1202 173 97 84 chr2 160708034 160708209 -92548374 + THE1C LTR MaLR 1 172 -203 327 49 0 0 chr2 160708209 160708250 -92548333 + (TC)n Simple_repeat Simple_repeat 1 41 0 1202 173 97 84 chr2 160708250 160708444 -92548139 + THE1C LTR MaLR 172 375 0 1010 216 65 119 chr2 160708444 160708488 -92548095 + L1MC5 LINE L1 7183 7228 -733 873 229 111 73 chr2 160708675 160709224 -92547359 + L1MC5 LINE L1 7339 7908 -53 230 0 33 0 chr2 160709273 160709303 -92547280 + (CA)n Simple_repeat Simple_repeat 2 32 0 2954 173 77 39 chr2 160709852 160710552 -92546031 + LTR8A LTR ERV1 1 727 0 384 239 0 0 chr2 160711481 160711574 -92545009 + AluJ/FLAM SINE Alu 1 73 -229 335 275 113 28 chr2 160711944 160712086 -92544497 - MIR3 SINE MIR -4 204 51 397 347 97 9 chr2 160712437 160712653 -92543930 - MIR SINE MIR -24 238 4 249 284 62 0 chr2 160714084 160714165 -92542418 + L2 LINE L2 3183 3268 -4 22 0 0 0 chr2 160714425 160714447 -92542136 + AT_rich Low_complexity Low_complexity 1 22 0 1641 132 120 0 chr2 160714550 160714816 -92541767 + AluSg SINE Alu 1 298 -2 420 266 31 23 chr2 160714936 160715064 -92541519 - MIR SINE MIR -61 201 73 2727 91 3 3 chr2 160715480 160715844 -92540739 + THE1B LTR MaLR 1 364 0 707 281 71 4 chr2 160716516 160716754 -92539829 + MIR SINE MIR 9 262 0 1605 142 0 0 chr2 160716994 160717226 -92539357 + AluJb SINE Alu 1 232 -80 406 311 34 8 chr2 160718251 160718370 -92538213 + L2 LINE L2 3146 3267 -5 189 0 0 0 chr2 160720532 160720553 -92536030 + (T)n Simple_repeat Simple_repeat 1 21 0 4469 164 64 6 chr2 160720960 160721538 -92535045 - L1MA8 LINE L1 -11 6280 5626 198 0 0 0 chr2 160721538 160721560 -92535023 + (TTTC)n Simple_repeat Simple_repeat 2 23 0 4469 164 64 6 chr2 160721560 160721923 -92534660 - L1MA8 LINE L1 -665 5626 5285 31 76 0 0 chr2 160721949 160722015 -92534568 + AT_rich Low_complexity Low_complexity 1 66 0 213 250 28 28 chr2 160722144 160722216 -92534367 + MIR SINE MIR 121 192 -70 1940 138 36 24 chr2 160722379 160722712 -92533871 + MER1B DNA MER1_type 1 337 0 2487 60 0 29 chr2 160723218 160723533 -92533050 - AluY SINE Alu -5 306 1 435 223 84 79 chr2 160723567 160723769 -92532814 - MER67D LTR ERV1 -6 508 306 1067 189 17 63 chr2 160723814 160724115 -92532468 - MER67D LTR ERV1 -203 311 25 344 219 52 83 chr2 160724203 160724299 -92532284 + MER5B DNA MER1_type 64 156 -22 1679 224 118 26 chr2 160724444 160725029 -92531554 - LTR48B LTR ERV1 0 644 6 603 281 108 40 chr2 160725189 160725669 -92530914 + MLT1L LTR MaLR 101 613 -2 235 336 74 27 chr2 160725828 160725977 -92530606 + L2 LINE L2 3116 3271 -1 2110 246 72 44 chr2 160727297 160729008 -92527575 + L1ME2 LINE L1 4422 6333 -1 194 347 40 46 chr2 160729222 160729395 -92527188 + MIR SINE MIR 18 147 -61 655 146 0 0 chr2 160730588 160730718 -92525865 - L1P LINE L1 -779 5387 5258 945 202 5 5 chr2 160730727 160730950 -92525633 - L1 LINE L1 -1269 4877 4655 4088 131 65 21 chr2 160730950 160731669 -92524914 + L1PA16 LINE L1 5412 6163 -3 1530 184 3 28 chr2 160732108 160732391 -92524192 + AluJo SINE Alu 22 297 -15 26 0 0 0 chr2 160732442 160732468 -92524115 + AT_rich Low_complexity Low_complexity 1 26 0 2713 82 3 0 chr2 160732561 160732915 -92523668 + THE1A LTR MaLR 1 355 0 11107 108 10 2 chr2 160732915 160734482 -92522101 + THE1A-int LTR MaLR 1 1579 -1 2691 85 3 0 chr2 160734482 160734836 -92521747 + THE1A LTR MaLR 1 355 0 545 199 49 35 chr2 160736353 160736530 -92520053 + MER110 LTR ERV1 326 476 -8 2474 70 0 3 chr2 160737466 160737778 -92518805 - AluY SINE Alu 0 311 1 343 304 71 28 chr2 160737904 160738106 -92518477 + L1MC/D LINE L1 5272 5477 -885 494 248 178 19 chr2 160738106 160738263 -92518320 - MER5A DNA MER1_type -1 188 7 257 290 48 48 chr2 160739572 160739696 -92516887 + L3 LINE CR1 589 712 -865 237 33 0 0 chr2 160739835 160739865 -92516718 + (A)n Simple_repeat Simple_repeat 1 30 0 2168 172 23 11 chr2 160740783 160741224 -92515359 - HERVS71 LTR ERV1 -8529 449 4 4101 58 24 6 chr2 160741227 160741775 -92514808 - LTR6B LTR ERV1 0 558 1 578 255 44 11 chr2 160742680 160742883 -92513700 + L1MCa LINE L1 1 176 -5869 2131 213 31 24 chr2 160742892 160743438 -92513145 + MER74A LTR ERVL 9 558 0 3092 225 54 21 chr2 160743441 160744589 -92511994 + L1MCa LINE L1 201 1390 -4848 1066 250 21 12 chr2 160744593 160744929 -92511654 + L1M4 LINE L1 3440 3778 -2368 * 1471 182 45 14 chr2 160744924 160745282 -92511301 + L1MC3 LINE L1 7417 7785 0 225 320 20 20 chr2 160745955 160746055 -92510528 - L3 LINE CR1 -271 1306 1207 2399 84 104 7 chr2 160746119 160746522 -92510061 - LTR7 LTR ERV1 -8 442 1 2289 90 48 13 chr2 160746522 160746899 -92509684 - HERVH LTR ERV1 0 7713 7324 1183 137 23 18 chr2 160746899 160746948 -92509635 - HERVH LTR ERV1 -1894 5819 5772 2095 118 0 7 chr2 160746948 160747245 -92509338 + AluY SINE Alu 1 295 -16 1183 137 23 18 chr2 160747245 160747414 -92509169 - HERVH LTR ERV1 -1941 5772 5600 5987 118 4 1 chr2 160747415 160748340 -92508243 - HERVH LTR ERV1 -2564 5149 4222 1802 151 1 4 chr2 160748339 160748647 -92507936 - HERVH LTR ERV1 -3423 4290 3994 * 1464 150 0 4 chr2 160748658 160748904 -92507679 - HERVH LTR ERV1 -3977 3736 3492 791 161 13 0 chr2 160748894 160749043 -92507540 - HERVH LTR ERV1 -4423 3290 3140 * 10010 102 9 28 chr2 160749022 160750662 -92505921 - HERVH LTR ERV1 -4718 2995 1387 1384 245 151 0 chr2 160751158 160751575 -92505008 - MLT2B1 LTR ERVL -40 480 1 244 289 39 51 chr2 160751575 160751731 -92504852 - MIR SINE MIR -8 254 101 710 215 92 65 chr2 160751732 160752047 -92504536 + MLT1A1 LTR MaLR 1 365 0 233 143 61 0 chr2 160752500 160752549 -92504034 - MER63 DNA MER1_type -1009 52 1 192 420 0 0 chr2 160752785 160752854 -92503729 + L2 LINE L2 3186 3254 -18 504 291 159 0 chr2 160753102 160753253 -92503330 + MER5A DNA MER1_type 15 189 0 518 182 0 0 chr2 160753881 160753969 -92502614 + 5S rRNA rRNA 4 91 -30 449 274 81 0 chr2 160753991 160754115 -92502468 - MIR SINE MIR -120 142 9 678 225 87 0 chr2 160754115 160754288 -92502295 - MER5A DNA MER1_type 0 189 2 341 148 0 0 chr2 160754532 160754586 -92501997 + LTR17 LTR ERV1 1 54 -726 217 307 87 63 chr2 160754608 160754735 -92501848 + MIR3 SINE MIR 28 157 -51 3222 145 12 6 chr2 160755858 160756367 -92500216 - MER41E LTR ERV1 0 512 1 196 300 0 0 chr2 160756451 160756501 -92500082 - L2 LINE L2 -35 3237 3188 3872 139 46 28 chr2 160756563 160757277 -92499306 + LTR8A LTR ERV1 1 727 0 2332 97 3 0 chr2 160758047 160758347 -92498236 - AluSp SINE Alu -12 301 1 431 304 76 0 chr2 160759215 160759439 -92497144 - L1ME LINE L1 -337 5784 5544 1366 152 35 18 chr2 160760017 160760300 -92496283 + L1ME1 LINE L1 5874 6161 -5 21 0 0 0 chr2 160760844 160760865 -92495718 + AT_rich Low_complexity Low_complexity 1 21 0 1717 109 4 16 chr2 160760939 160761186 -92495397 - AluSc SINE Alu -15 294 51 229 254 27 45 chr2 160761391 160761501 -92495082 - L1MEc LINE L1 -2686 3529 3422 252 103 52 0 chr2 160761529 160761587 -92494996 + (TA)n Simple_repeat Simple_repeat 1 61 0 335 248 47 60 chr2 160761598 160761671 -92494912 - L1MEc LINE L1 -2823 3392 3320 1951 177 0 0 chr2 160761671 160761981 -92494602 - AluSx SINE Alu -2 310 1 335 248 47 60 chr2 160761981 160762206 -92494377 - L1MEc LINE L1 -2895 3320 3098 3183 157 24 12 chr2 160762211 160762520 -92494063 + L1PA16 LINE L1 5465 5786 -380 2255 110 0 0 chr2 160762520 160762810 -92493773 + AluSx SINE Alu 12 301 -11 3183 157 24 12 chr2 160762810 160763091 -92493492 + L1PA16 LINE L1 5786 6062 -104 365 228 139 5 chr2 160763178 160763380 -92493203 - L1MEc LINE L1 -3138 3077 2849 543 334 75 25 chr2 160763599 160764153 -92492430 - L1MEc LINE L1 -3646 2569 2033 1084 252 50 36 chr2 160764248 160764609 -92491974 + MLT1E3 LTR MaLR 60 425 -199 288 229 22 22 chr2 160764898 160765007 -92491576 - L1MEc LINE L1 -861 1715 1563 2231 120 0 13 chr2 160765379 160765558 -92491025 - AluSx SINE Alu 0 312 137 2263 78 7 3 chr2 160765558 160765865 -92490718 - AluY SINE Alu -3 308 1 2231 120 0 13 chr2 160765865 160766001 -92490582 - AluSx SINE Alu -175 137 1 232 238 113 38 chr2 160766115 160766195 -92490388 - MLT1D LTR MaLR -400 105 20 495 310 48 67 chr2 160766995 160767366 -92489217 - LTR16A1 LTR ERVL -4 453 90 820 292 83 40 chr2 160767733 160768154 -92488429 + MLT1J1 LTR MaLR 8 446 0 180 0 0 0 chr2 160769598 160769618 -92486965 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr2 160769802 160769823 -92486760 + AT_rich Low_complexity Low_complexity 1 21 0 24 100 0 0 chr2 160772598 160772678 -92483905 + AT_rich Low_complexity Low_complexity 1 80 0 23 0 0 0 chr2 160773611 160773634 -92482949 + AT_rich Low_complexity Low_complexity 1 23 0 2104 97 37 0 chr2 160773911 160774209 -92482374 - AluSq SINE Alu -1 312 4 1646 62 0 5 chr2 160774228 160774436 -92482147 - AluY SINE Alu 0 311 105 620 334 32 57 chr2 160775644 160776048 -92480535 - L2 LINE L2 -1 3312 2919 189 243 40 27 chr2 160776697 160776771 -92479812 - L2 LINE L2 -192 3080 3006 21 0 0 0 chr2 160776796 160776817 -92479766 + AT_rich Low_complexity Low_complexity 1 21 0 280 314 27 66 chr2 160776969 160777227 -92479356 - L2 LINE L2 -514 2800 2553 532 264 160 64 chr2 160778148 160778398 -92478185 - MLT1L LTR MaLR -340 275 2 24 0 0 0 chr2 160779770 160779794 -92476789 + AT_rich Low_complexity Low_complexity 1 24 0 1877 144 9 38 chr2 160780231 160780578 -92476005 + MER1B DNA MER1_type 1 337 0 261 281 22 79 chr2 160780745 160780884 -92475699 + MIR3 SINE MIR 69 199 -9 245 247 41 21 chr2 160781658 160781755 -92474828 - LTR67 LTR ERVL 0 557 459 2163 50 0 8 chr2 160783334 160783595 -92472988 + AluY SINE Alu 19 277 -34 2522 147 26 91 chr2 160783734 160784272 -92472311 - MLT2B1 LTR ERVL 0 520 18 1049 127 0 17 chr2 160784307 160784339 -92472244 + (TTCC)n Simple_repeat Simple_repeat 1 209 0 1049 127 0 17 chr2 160784339 160784520 -92472063 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 55 29 0 0 chr2 160785166 160785235 -92471348 + AT_rich Low_complexity Low_complexity 1 69 0 254 236 101 11 chr2 160785235 160785324 -92471259 + L1MC4 LINE L1 6609 6705 -1337 198 103 0 0 chr2 160785409 160785438 -92471145 + (TA)n Simple_repeat Simple_repeat 2 30 0 1141 264 31 54 chr2 160786404 160786791 -92469792 + LTR16C LTR ERVL 97 474 -17 194 281 70 0 chr2 160786817 160786874 -92469709 + L2 LINE L2 3212 3272 0 493 316 100 4 chr2 160787819 160788050 -92468533 + MIR SINE MIR 2 254 -8 289 303 84 42 chr2 160789734 160789853 -92466730 + L2 LINE L2 3148 3271 -1 1585 168 0 36 chr2 160789979 160790259 -92466324 + AluJb SINE Alu 1 270 -42 343 111 14 14 chr2 160790282 160790354 -92466229 + (TA)n Simple_repeat Simple_repeat 2 73 0 1360 208 62 4 chr2 160790822 160791096 -92465487 - AluJo SINE Alu -19 293 4 409 340 105 52 chr2 160791517 160792203 -92464380 + L2 LINE L2 2239 2960 -354 22 35 0 0 chr2 160792383 160792412 -92464171 + AT_rich Low_complexity Low_complexity 1 29 0 195 382 18 0 chr2 160792412 160792467 -92464116 + L2 LINE L2 3144 3199 -73 27 81 0 0 chr2 160793677 160793739 -92462844 + AT_rich Low_complexity Low_complexity 1 62 0 25 31 0 0 chr2 160793917 160793949 -92462634 + AT_rich Low_complexity Low_complexity 1 32 0 1058 216 43 43 chr2 160794377 160794678 -92461905 + AluJo SINE Alu 1 301 -1 319 259 49 57 chr2 160795095 160795242 -92461341 - L1MC/D LINE L1 -466 5655 5510 180 293 24 61 chr2 160795629 160795711 -92460872 + L2 LINE L2 3193 3271 -1 22 35 0 0 chr2 160795930 160795959 -92460624 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 160796572 160796593 -92459990 + AT_rich Low_complexity Low_complexity 1 21 0 430 289 123 9 chr2 160797211 160797422 -92459161 - L1ME LINE L1 -375 5746 5512 201 265 29 0 chr2 160797569 160797671 -92458912 + (TA)n Simple_repeat Simple_repeat 2 106 0 328 323 62 12 chr2 160797708 160797869 -92458714 - L1ME4a LINE L1 -159 5962 5794 373 162 171 43 chr2 160797970 160798087 -92458496 + MER89 LTR ERV1 426 557 -2 216 282 190 35 chr2 160798660 160798802 -92457781 + MIR SINE MIR 1 164 -98 670 196 15 88 chr2 160798896 160799100 -92457483 - MER5A DNA MER1_type 0 189 1 236 190 44 51 chr2 160799995 160800132 -92456451 + (TA)n Simple_repeat Simple_repeat 1 136 0 390 193 33 44 chr2 160800151 160800332 -92456251 + (TA)n Simple_repeat Simple_repeat 2 180 0 264 220 18 9 chr2 160800378 160800487 -92456096 + (TA)n Simple_repeat Simple_repeat 1 110 0 516 318 46 46 chr2 160801796 160802035 -92454548 + MIR SINE MIR 9 247 -15 183 80 0 0 chr2 160802036 160802061 -92454522 + (TTA)n Simple_repeat Simple_repeat 3 27 0 274 338 116 60 chr2 160803237 160804086 -92452497 - L2 LINE L2 -203 3069 2152 283 287 28 28 chr2 160804906 160805014 -92451569 - MIR SINE MIR -1 261 154 1826 133 80 0 chr2 160806055 160806356 -92450227 - MER7A DNA MER2_type 0 346 24 21 0 0 0 chr2 160806695 160806716 -92449867 + AT_rich Low_complexity Low_complexity 1 21 0 419 297 58 22 chr2 160809190 160809328 -92447255 + MIR SINE MIR 41 183 -79 453 254 100 21 chr2 160809405 160809612 -92446971 - L1ME4a LINE L1 -304 5817 5584 377 309 48 32 chr2 160810342 160810530 -92446053 - L1MEc LINE L1 -5707 689 499 1648 277 54 47 chr2 160810634 160810790 -92445793 + MLT1E LTR MaLR 13 166 -427 2322 90 3 0 chr2 160810790 160811100 -92445483 - AluY SINE Alu 0 311 1 1648 277 54 47 chr2 160811100 160811520 -92445063 + MLT1E LTR MaLR 166 593 0 491 316 36 45 chr2 160811857 160812489 -92444094 - L1MEd LINE L1 -4756 1554 889 1008 320 19 29 chr2 160812676 160813051 -92443532 + LTR16C LTR ERVL 111 481 -10 389 296 25 25 chr2 160813239 160813401 -92443182 - MER58B DNA MER1_type -8 333 172 2093 123 0 3 chr2 160813413 160813715 -92442868 - AluSq SINE Alu -12 301 1 557 273 256 14 chr2 160814290 160814579 -92442004 + L2 LINE L2 561 919 -2395 256 358 83 0 chr2 160814593 160814713 -92441870 + L2 LINE L2 2077 2206 -1108 362 220 11 44 chr2 160815905 160815996 -92440587 + MIR SINE MIR 174 261 -1 396 316 158 0 chr2 160816372 160816568 -92440015 - L3 LINE CR1 -64 1513 1287 184 383 158 5 chr2 160817801 160818023 -92438560 - MIR SINE MIR -4 258 3 759 83 0 0 chr2 160818430 160818551 -92438032 + (TC)n Simple_repeat Simple_repeat 1 121 0 396 0 0 0 chr2 160818550 160818594 -92437989 + (CA)n Simple_repeat Simple_repeat 1 44 0 * 1944 140 3 3 chr2 160819682 160819975 -92436608 - AluSx SINE Alu -19 293 1 26 0 0 0 chr2 160819984 160820010 -92436573 + AT_rich Low_complexity Low_complexity 1 26 0 343 313 93 22 chr2 160820248 160820430 -92436153 - MIR SINE MIR -55 207 13 1092 123 0 12 chr2 160821560 160821730 -92434853 - AluSg/x SINE Alu 0 310 143 2424 185 33 26 chr2 160821749 160822321 -92434262 - L1MA8 LINE L1 -5 6286 5711 199 89 0 44 chr2 160825525 160825570 -92431013 + (TA)n Simple_repeat Simple_repeat 2 44 0 1062 297 61 16 chr2 160825743 160826380 -92430203 + L1MEc LINE L1 1008 1673 -4723 225 0 0 0 chr2 160827030 160827055 -92429528 + (A)n Simple_repeat Simple_repeat 1 25 0 1833 171 59 11 chr2 160827298 160827654 -92428929 - L1MB3 LINE L1 -297 5886 5514 24 0 0 0 chr2 160829114 160829138 -92427445 + AT_rich Low_complexity Low_complexity 1 24 0 28 29 0 0 chr2 160829553 160829588 -92426995 + AT_rich Low_complexity Low_complexity 1 35 0 341 359 18 49 chr2 160830044 160830267 -92426316 - L2 LINE L2 -464 2850 2635 366 363 42 44 chr2 160830370 160830827 -92425756 - L2 LINE L2 -902 2412 1957 215 273 0 0 chr2 160831419 160831463 -92425120 + L2 LINE L2 3219 3262 -10 219 324 133 50 chr2 160831517 160831974 -92424609 + L2 LINE L2 2805 3299 -14 25 51 0 0 chr2 160832036 160832075 -92424508 + AT_rich Low_complexity Low_complexity 1 39 0 227 237 138 64 chr2 160832752 160832897 -92423686 + MER5B DNA MER1_type 5 171 -18 309 301 156 29 chr2 160833190 160833363 -92423220 - MER117 DNA MER1_type 0 197 3 474 18 0 0 chr2 160834252 160834307 -92422276 + (CA)n Simple_repeat Simple_repeat 2 56 0 2243 107 0 3 chr2 160834410 160834826 -92421757 - AluSq SINE Alu 0 416 2 480 261 117 27 chr2 160835309 160835531 -92421052 + L1MC4a LINE L1 5733 5974 -1834 1114 93 0 0 chr2 160835571 160835722 -92420861 + L1PA8 LINE L1 6020 6170 -2 621 293 69 17 chr2 160835847 160836079 -92420504 + MIR SINE MIR 19 262 0 2351 88 3 3 chr2 160836376 160836683 -92419900 - AluSg SINE Alu -3 307 1 4082 123 36 7 chr2 160836714 160837387 -92419196 - L1MA2 LINE L1 0 7723 7032 2148 95 25 9 chr2 160837390 160837787 -92418796 - LTR7 LTR ERV1 -2 448 1 19618 162 34 15 chr2 160837790 160841886 -92414697 - L1MA2 LINE L1 -691 7032 2749 1712 166 0 0 chr2 160841886 160842164 -92414419 - AluSq SINE Alu -15 298 21 19618 162 34 15 chr2 160842164 160844958 -92411625 - L1MA2 LINE L1 -4974 2749 10 445 159 24 159 chr2 160844958 160845165 -92411418 + MER4B-int LTR ERV1 2298 2476 -4282 907 153 10 45 chr2 160845258 160845460 -92411123 + MER4B-int LTR ERV1 3536 3730 -2868 968 206 58 33 chr2 160845541 160846065 -92410518 + MER4B-int LTR ERV1 2666 2950 -1986 291 315 65 4 chr2 160846408 160846543 -92410040 - MLT1H1 LTR MaLR -362 187 2 1474 283 151 8 chr2 160846615 160847117 -92409466 + MLT2E LTR ERVL 55 628 0 482 304 67 57 chr2 160847424 160847707 -92408876 - MLT1I LTR MaLR -50 359 74 1390 160 0 0 chr2 160848320 160848526 -92408057 + AluSx SINE Alu 1 206 -106 256 188 21 0 chr2 160848605 160848653 -92407930 - MER110 LTR ERV1 -336 155 107 299 355 45 0 chr2 160849193 160849303 -92407280 - MIR3 SINE MIR -49 159 45 280 347 45 50 chr2 160850246 160850283 -92406300 + MIR SINE MIR 57 93 -169 1916 188 75 15 chr2 160850283 160850751 -92405832 + LTR54B LTR ERV1 1 496 -2 280 347 45 50 chr2 160850751 160850912 -92405671 + MIR SINE MIR 93 254 -8 190 367 0 0 chr2 160850871 160850931 -92405652 - MIR SINE MIR -155 107 48 * 1066 145 109 87 chr2 160851181 160851457 -92405126 + LTR49 LTR ERV1 1 282 -313 1876 121 28 44 chr2 160851468 160851904 -92404679 + MER51B LTR ERV1 3 377 0 567 208 82 54 chr2 160851940 160852164 -92404419 + LTR29 LTR ERV1 366 638 -15 2239 81 0 28 chr2 160852922 160853242 -92403341 - AluY SINE Alu 0 311 1 1971 134 34 34 chr2 160855051 160855379 -92401204 + MSTC LTR MaLR 1 328 -100 2143 173 77 10 chr2 160855387 160855803 -92400780 + LTR47A LTR ERVL 9 452 0 500 212 20 0 chr2 160855803 160855902 -92400681 + MSTC LTR MaLR 324 424 -4 2234 81 7 7 chr2 160856160 160856457 -92400126 + AluY SINE Alu 1 297 -14 646 106 0 0 chr2 160856791 160856885 -92399698 + AluSg/x SINE Alu 217 310 -2 992 164 0 0 chr2 160857100 160857280 -92399303 + AluSg/x SINE Alu 134 313 0 342 319 82 24 chr2 160857584 160857791 -92398792 + L1ME2 LINE L1 308 526 -5846 1312 270 133 41 chr2 160858460 160860451 -92396132 + L1ME2 LINE L1 1173 3469 -2913 981 268 99 38 chr2 160860498 160860628 -92395955 + L1ME2 LINE L1 3586 3707 -2675 2094 103 7 20 chr2 160860628 160860929 -92395654 + AluSq SINE Alu 1 297 -16 981 268 99 38 chr2 160860929 160861665 -92394918 + L1ME2 LINE L1 3707 4498 -1884 * 1118 259 71 30 chr2 160861659 160862043 -92394540 + L1ME2 LINE L1 5962 6328 -72 2143 151 20 3 chr2 160862043 160862401 -92394182 + THE1B LTR MaLR 1 364 0 9207 122 89 3 chr2 160862401 160863856 -92392727 + THE1B-int LTR MaLR 1 1580 0 2250 116 11 53 chr2 160863856 160864162 -92392421 + THE1B LTR MaLR 1 290 -74 2337 100 3 3 chr2 160864162 160864473 -92392110 - AluSp SINE Alu -2 311 1 2250 116 11 53 chr2 160864473 160864545 -92392038 + THE1B LTR MaLR 290 363 -1 1118 259 71 30 chr2 160864545 160864564 -92392019 + L1ME2 LINE L1 6327 6384 -16 378 0 0 0 chr2 160864750 160864792 -92391791 + (TG)n Simple_repeat Simple_repeat 2 43 0 207 69 0 0 chr2 160864793 160864822 -92391761 + (GA)n Simple_repeat Simple_repeat 2 30 0 23 0 0 0 chr2 160865303 160865326 -92391257 + AT_rich Low_complexity Low_complexity 1 23 0 207 163 0 47 chr2 160866171 160866214 -92390369 + GA-rich Low_complexity Low_complexity 4 44 0 282 284 0 12 chr2 160866349 160866430 -92390153 + HAL1 LINE L1 1 80 -2427 355 294 98 77 chr2 160866983 160867310 -92389273 + L2 LINE L2 2980 3313 0 246 204 0 54 chr2 160867658 160867751 -92388832 + A-rich Low_complexity Low_complexity 4 91 0 1958 165 0 82 chr2 160867810 160868106 -92388477 - MLT1B LTR MaLR 0 390 138 1468 152 128 35 chr2 160868106 160868449 -92388134 + THE1C LTR MaLR 1 375 0 1958 165 0 82 chr2 160868449 160868577 -92388006 - MLT1B LTR MaLR -252 138 1 23 68 0 0 chr2 160868640 160868684 -92387899 + AT_rich Low_complexity Low_complexity 1 44 0 22 0 0 0 chr2 160869123 160869145 -92387438 + AT_rich Low_complexity Low_complexity 1 22 0 2112 102 3 0 chr2 160870020 160870304 -92386279 + AluSx SINE Alu 1 285 -27 228 262 29 29 chr2 160870731 160870834 -92385749 + LTR33A LTR ERVL 408 510 -13 1058 234 63 29 chr2 160870987 160871364 -92385219 - MSTC LTR MaLR 0 428 1 255 308 29 0 chr2 160873124 160873228 -92383355 - LTR16A LTR ERVL -44 406 300 333 339 62 27 chr2 160873231 160873455 -92383128 - ERVL LTR ERVL -621 5143 4912 2117 120 3 0 chr2 160875106 160875429 -92381154 + AluSp SINE Alu 3 313 0 3187 98 2 14 chr2 160875433 160875934 -92380649 - L1P LINE L1 -2567 3579 3085 1561 70 0 0 chr2 160875935 160876136 -92380447 + L1PA7 LINE L1 5952 6152 -2 5805 173 26 19 chr2 160876550 160877613 -92378970 - L1MA4 LINE L1 -47 6253 5199 186 43 0 0 chr2 160877613 160877636 -92378947 + (CCTG)n Simple_repeat Simple_repeat 1 23 0 264 30 0 0 chr2 160877636 160877669 -92378914 + (TCCC)n Simple_repeat Simple_repeat 2 34 0 5805 173 26 19 chr2 160877669 160878880 -92377703 - L1MA4 LINE L1 -1100 5200 3952 219 240 40 0 chr2 160878948 160878998 -92377585 + GA-rich Low_complexity Low_complexity 3 54 0 12904 212 31 24 chr2 160879109 160879875 -92376708 - L1MA4 LINE L1 -357 7362 6603 186 43 0 0 chr2 160879875 160879898 -92376685 + (CCTG)n Simple_repeat Simple_repeat 1 23 0 264 30 0 0 chr2 160879898 160879931 -92376652 + (TCCC)n Simple_repeat Simple_repeat 2 34 0 12904 212 31 24 chr2 160879931 160882601 -92373982 - L1MA4 LINE L1 -1116 6603 3954 231 36 0 0 chr2 160882601 160882629 -92373954 + (TG)n Simple_repeat Simple_repeat 2 29 0 12904 212 31 24 chr2 160882629 160884025 -92372558 - L1MA4 LINE L1 -3765 3954 2505 2016 114 10 14 chr2 160884025 160884322 -92372261 - AluSg1 SINE Alu -13 296 1 12904 212 31 24 chr2 160884322 160884783 -92371800 - L1MA4 LINE L1 -5214 2505 2049 505 361 53 32 chr2 160885211 160885718 -92370865 - L1MA4 LINE L1 -5763 1733 1216 199 315 63 0 chr2 160885835 160885946 -92370637 + L2 LINE L2 3122 3239 -74 246 264 28 85 chr2 160886477 160886583 -92370000 - MER5B DNA MER1_type -78 100 1 347 276 110 31 chr2 160886714 160886877 -92369706 + L1MC4a LINE L1 5374 5549 -2259 234 316 0 0 chr2 160887011 160887087 -92369496 + L1MC4a LINE L1 5727 5802 -360 897 291 75 42 chr2 160887110 160887564 -92369019 - MLT1H LTR MaLR -8 541 73 552 272 101 50 chr2 160887589 160887887 -92368696 - MER46C DNA MER2_type -24 314 2 23 68 0 0 chr2 160888005 160888049 -92368534 + AT_rich Low_complexity Low_complexity 1 44 0 338 257 43 29 chr2 160888473 160888613 -92367970 + L1MC4a LINE L1 5802 5943 -1865 2764 7 0 0 chr2 160888734 160889038 -92367545 - AluY SINE Alu -7 304 1 23 68 0 0 chr2 160889073 160889117 -92367466 + AT_rich Low_complexity Low_complexity 1 44 0 229 184 20 0 chr2 160889202 160889251 -92367332 - MER46C DNA MER2_type -277 61 12 1783 173 131 11 chr2 160889268 160889650 -92366933 + MSTA LTR MaLR 1 428 0 899 278 101 3 chr2 160889987 160890275 -92366308 + L1MC4a LINE L1 6549 6864 -944 29 70 0 0 chr2 160890965 160891022 -92365561 + AT_rich Low_complexity Low_complexity 1 57 0 730 275 55 64 chr2 160891072 160892435 -92364148 - L1MC4 LINE L1 -84 7958 6669 2165 125 0 0 chr2 160892504 160892801 -92363782 - AluSx SINE Alu -15 297 1 25 65 0 0 chr2 160892837 160892883 -92363700 + AT_rich Low_complexity Low_complexity 1 46 0 459 299 125 70 chr2 160892998 160893330 -92363253 - L1MC4a LINE L1 -1445 6363 5994 450 0 0 0 chr2 160893330 160893380 -92363203 + (TG)n Simple_repeat Simple_repeat 2 51 0 459 299 125 70 chr2 160893380 160893535 -92363048 - L1MC4a LINE L1 -1814 5994 5849 22 35 0 0 chr2 160893958 160893987 -92362596 + AT_rich Low_complexity Low_complexity 1 29 0 30 27 0 0 chr2 160894746 160894783 -92361800 + AT_rich Low_complexity Low_complexity 1 37 0 7229 76 3 5 chr2 160894859 160895815 -92360768 - HERVS71 LTR ERV1 -7483 1495 542 907 58 14 0 chr2 160895845 160895984 -92360599 + (GA)n Simple_repeat Simple_repeat 2 142 0 3074 100 9 13 chr2 160895984 160896434 -92360149 - HERVS71 LTR ERV1 -8527 451 4 434 87 43 0 chr2 160896437 160896506 -92360077 - LTR6B LTR ERV1 0 558 487 718 208 0 0 chr2 160897164 160897294 -92359289 - FLAM_A SINE Alu -3 130 1 229 322 107 33 chr2 160898843 160898964 -92357619 + L2 LINE L2 3141 3270 -2 781 203 66 51 chr2 160900066 160900421 -92356162 - MSTB2 LTR MaLR 0 457 8 247 297 223 39 chr2 160900426 160900482 -92356101 + L3 LINE CR1 1168 1212 -365 2113 126 10 0 chr2 160900482 160900783 -92355800 + AluSx SINE Alu 1 304 -8 247 297 223 39 chr2 160900783 160901063 -92355520 + L3 LINE CR1 1212 1566 -11 235 326 82 76 chr2 160901136 160901213 -92355370 + L3 LINE CR1 1345 1420 -157 486 220 30 23 chr2 160901213 160901345 -92355238 - MER94 DNA DNA -1 133 1 235 326 82 76 chr2 160901345 160901451 -92355132 + L3 LINE CR1 1420 1529 -48 23 0 0 0 chr2 160901484 160901507 -92355076 + AT_rich Low_complexity Low_complexity 1 23 0 2098 129 3 10 chr2 160901997 160902292 -92354291 + AluSx SINE Alu 3 295 -17 207 246 0 0 chr2 160902420 160902477 -92354106 + (CA)n Simple_repeat Simple_repeat 2 58 0 481 275 12 0 chr2 160902935 160903095 -92353488 + AluSx SINE Alu 1 162 -150 333 0 0 0 chr2 160953618 160953655 -92302928 + (T)n Simple_repeat Simple_repeat 1 37 0 261 257 40 0 chr2 160955040 160955141 -92301442 + GA-rich Low_complexity Low_complexity 1 105 0 241 24 48 24 chr2 160955189 160955231 -92301352 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 517 290 87 29 chr2 160955286 160955493 -92301090 - MIR SINE MIR -28 234 16 547 301 25 10 chr2 160955733 160955932 -92300651 + MIR SINE MIR 23 224 -38 316 301 142 18 chr2 160956136 160956355 -92300228 - MIR SINE MIR -16 246 1 224 173 19 19 chr2 160956408 160956460 -92300123 + (TATATG)n Simple_repeat Simple_repeat 2 53 0 361 335 24 63 chr2 160956651 160956857 -92299726 + MIR SINE MIR 9 206 -56 2223 301 105 22 chr2 160957474 160958906 -92297677 - L1MDa LINE L1 -2212 4328 2777 1711 221 153 14 chr2 160958914 160959431 -92297152 - L1MDa LINE L1 -5189 1351 763 2054 171 25 6 chr2 160959434 160959796 -92296787 + Tigger2 DNA MER2_type 2350 2718 0 782 197 141 9 chr2 160959796 160960009 -92296574 + MER2 DNA MER2_type 105 345 0 321 118 0 0 chr2 160960011 160960023 -92296560 + (TA)n Simple_repeat Simple_repeat 1 63 0 321 118 0 0 chr2 160960023 160960074 -92296509 + (TA)n Simple_repeat Simple_repeat 1 51 0 1585 196 28 0 chr2 160962994 160963280 -92293303 + AluJo SINE Alu 1 294 -18 213 318 117 28 chr2 160963433 160963612 -92292971 - MIR SINE MIR 0 262 68 22 35 0 0 chr2 160963869 160963898 -92292685 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 160964097 160964118 -92292465 + AT_rich Low_complexity Low_complexity 1 21 0 712 181 0 18 chr2 160964250 160964443 -92292140 + AluJ SINE Alu 75 303 -9 28 48 0 0 chr2 160964473 160964515 -92292068 + AT_rich Low_complexity Low_complexity 1 42 0 304 281 39 55 chr2 160965042 160965170 -92291413 + MIR SINE MIR 65 190 -72 26 0 0 0 chr2 160967643 160967669 -92288914 + AT_rich Low_complexity Low_complexity 1 26 0 333 185 0 0 chr2 160967773 160967838 -92288745 + (CATATA)n Simple_repeat Simple_repeat 2 66 0 324 281 26 72 chr2 160969429 160969582 -92287001 - L2 LINE L2 0 3313 3168 2304 92 0 13 chr2 160969626 160969942 -92286641 + AluSx SINE Alu 1 312 0 21 0 0 0 chr2 160970596 160970617 -92285966 + AT_rich Low_complexity Low_complexity 1 21 0 845 272 26 0 chr2 160970971 160971166 -92285417 - MER90 LTR ERV1 0 614 415 327 317 57 34 chr2 160971166 160971428 -92285155 - L1M4 LINE L1 -1965 4181 3914 574 298 84 81 chr2 160971715 160972346 -92284237 + L1M4 LINE L1 4067 4699 -1447 2328 284 127 30 chr2 160972563 160973122 -92283461 - L1M4 LINE L1 -1460 4686 4182 2282 93 0 19 chr2 160973122 160973432 -92283151 - AluSc SINE Alu -5 304 1 2328 284 127 30 chr2 160973432 160975069 -92281514 - L1M4 LINE L1 -1964 4182 2278 2197 77 0 33 chr2 160975257 160975556 -92281027 + AluY SINE Alu 7 295 -16 3641 55 0 8 chr2 160975822 160976293 -92280290 - L1PA8 LINE L1 0 6172 5706 24 32 0 0 chr2 160976483 160976514 -92280069 + AT_rich Low_complexity Low_complexity 1 31 0 251 317 79 11 chr2 160976791 160976903 -92279680 + MIR SINE MIR 49 171 -37 479 233 156 34 chr2 160976944 160977140 -92279443 - MLT1E2 LTR MaLR -319 307 118 1025 97 0 0 chr2 160978196 160978341 -92278242 + L1PB1 LINE L1 6007 6151 0 555 242 73 46 chr2 160978360 160978687 -92277896 - L1M4 LINE L1 -3040 3106 2771 2051 169 21 8 chr2 160978841 160979226 -92277357 - MLT1B LTR MaLR 0 390 1 305 294 47 68 chr2 160979439 160979674 -92276909 + L1 LINE L1 4308 4537 -1609 236 322 41 34 chr2 160979849 160979995 -92276588 + MIR SINE MIR 72 218 -44 518 254 103 10 chr2 160981024 160981229 -92275354 - L1MD1 LINE L1 0 7805 6085 374 148 62 0 chr2 160981223 160981304 -92275279 - L1MC3 LINE L1 0 7785 7700 * 1285 262 88 63 chr2 160981287 160981453 -92275130 - L1M4 LINE L1 -2160 3986 3826 2210 94 0 16 chr2 160981453 160981760 -92274823 - AluSq SINE Alu -11 302 1 1285 262 88 63 chr2 160981760 160982525 -92274058 - L1M4 LINE L1 -2320 3826 3032 230 284 68 11 chr2 160983019 160983107 -92273476 + MIR SINE MIR 63 155 -107 1023 60 0 0 chr2 160983685 160983818 -92272765 - L1PA7 LINE L1 -129 6025 5893 946 59 0 0 chr2 160983817 160983970 -92272613 + L1PA7 LINE L1 6013 6165 0 * 25 83 0 0 chr2 160984220 160984280 -92272303 + AT_rich Low_complexity Low_complexity 1 60 0 2039 202 0 3 chr2 160984811 160985177 -92271406 - MLT1A1 LTR MaLR 0 365 1 1791 197 6 6 chr2 160985517 160985847 -92270736 + MER2 DNA MER2_type 1 330 -15 229 208 0 0 chr2 160986744 160986797 -92269786 + (TA)n Simple_repeat Simple_repeat 1 53 0 468 276 58 29 chr2 160987239 160987482 -92269101 - L1ME LINE L1 -575 5587 5338 653 289 17 0 chr2 160987730 160987910 -92268673 - AluJb SINE Alu -1 311 129 2429 74 0 3 chr2 160987912 160988222 -92268361 - AluY SINE Alu -2 309 1 22 0 0 0 chr2 160988225 160988247 -92268336 + AT_rich Low_complexity Low_complexity 1 22 0 315 182 8 0 chr2 160988252 160988328 -92268255 - FLAM_A SINE Alu 0 133 81 296 293 9 9 chr2 160988634 160988750 -92267833 - L1ME LINE L1 -1497 4649 4534 1777 211 188 2 chr2 160988995 160989421 -92267162 + MLT1D LTR MaLR 1 505 0 217 238 0 0 chr2 160990181 160990223 -92266360 + MIR SINE MIR 103 144 -64 218 280 69 43 chr2 160990866 160991012 -92265571 + MIR SINE MIR 2 148 -62 1346 130 27 14 chr2 160991790 160992013 -92264570 + MER30 DNA MER1_type 5 230 0 243 381 10 0 chr2 160992018 160992115 -92264468 + L2 LINE L2 2871 2968 -304 843 166 60 74 chr2 160992195 160992412 -92264171 - MER20 DNA MER1_type -5 214 1 579 284 33 85 chr2 160992427 160992733 -92263850 + L2 LINE L2 3022 3311 -2 2096 247 60 11 chr2 160992859 160993413 -92263170 + MER119 DNA MER1_type 3 583 0 622 123 9 0 chr2 160993533 160993639 -92262944 - L1P4 LINE L1 -714 5451 5345 296 325 171 29 chr2 160994660 160994900 -92261683 + L2 LINE L2 2475 2748 -566 1990 169 42 44 chr2 160995504 160995935 -92260648 - MSTB1 LTR MaLR 0 432 3 331 221 44 0 chr2 160995986 160996054 -92260529 - MER69 DNA AcHobo -106 71 1 289 211 0 0 chr2 160996961 160997013 -92259570 + MIR SINE MIR 63 114 -148 23 33 0 0 chr2 160997038 160997068 -92259515 + AT_rich Low_complexity Low_complexity 1 30 0 5052 185 34 18 chr2 160997070 160998083 -92258500 - L1MC2 LINE L1 -9 6335 5306 24 0 0 0 chr2 160998097 160998121 -92258462 + AT_rich Low_complexity Low_complexity 1 24 0 2027 93 14 0 chr2 160998146 160998449 -92258134 + AluY SINE Alu 1 307 0 195 223 27 0 chr2 160999115 160999227 -92257356 + (TA)n Simple_repeat Simple_repeat 2 116 0 2077 96 11 0 chr2 160999654 160999934 -92256649 + AluSx SINE Alu 30 312 0 23 68 0 0 chr2 161001142 161001186 -92255397 + AT_rich Low_complexity Low_complexity 1 44 0 22 56 0 0 chr2 161001670 161001706 -92254877 + AT_rich Low_complexity Low_complexity 1 36 0 644 320 49 12 chr2 161002021 161002268 -92254315 + MIR SINE MIR 7 262 0 23 68 0 0 chr2 161002355 161002399 -92254184 + AT_rich Low_complexity Low_complexity 1 44 0 37538 86 11 10 chr2 161002647 161008779 -92247804 - L1PA6 LINE L1 -4 6150 11 2065 125 3 0 chr2 161008828 161009115 -92247468 - AluSx SINE Alu -24 288 1 2206 112 3 0 chr2 161009385 161009680 -92246903 + AluSx SINE Alu 1 296 -16 247 352 68 42 chr2 161010082 161010318 -92246265 - MIR SINE MIR -1 261 20 203 61 30 0 chr2 161011165 161011198 -92245385 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 2040 123 3 0 chr2 161011210 161011495 -92245088 - AluSg SINE Alu -24 286 1 14422 50 2 1 chr2 161011828 161014427 -92242156 - L1PA5 LINE L1 -1 6153 3554 2189 114 3 3 chr2 161015522 161015829 -92240754 - AluSx SINE Alu -1 311 5 279 341 49 12 chr2 161015929 161016093 -92240490 + L1 LINE L1 4900 5069 -1077 23 33 0 0 chr2 161019077 161019107 -92237476 + AT_rich Low_complexity Low_complexity 1 30 0 29 47 0 0 chr2 161019160 161019203 -92237380 + AT_rich Low_complexity Low_complexity 1 43 0 1905 158 0 13 chr2 161019543 161019859 -92236724 - AluJb SINE Alu 0 312 1 2275 94 0 0 chr2 161020645 161020944 -92235639 - AluSq SINE Alu -14 299 1 234 91 0 0 chr2 161021671 161021704 -92234879 + (CA)n Simple_repeat Simple_repeat 1 33 0 24 53 0 0 chr2 161023298 161023336 -92233247 + AT_rich Low_complexity Low_complexity 1 38 0 295 283 142 0 chr2 161023585 161023698 -92232885 + MIR SINE MIR 120 248 -14 533 100 54 0 chr2 161024068 161024198 -92232385 + (TA)n Simple_repeat Simple_repeat 1 137 0 2084 106 7 3 chr2 161024199 161024482 -92232101 - AluSc SINE Alu -25 284 1 202 215 15 31 chr2 161025338 161025403 -92231180 + (TA)n Simple_repeat Simple_repeat 2 65 0 1312 213 92 59 chr2 161025479 161025968 -92230615 + MLT1D LTR MaLR 1 505 0 908 249 22 26 chr2 161026831 161027060 -92229523 + MIR SINE MIR 35 262 0 180 152 0 0 chr2 161027158 161027191 -92229392 + (CA)n Simple_repeat Simple_repeat 2 34 0 2165 92 3 3 chr2 161027537 161027830 -92228753 + AluSq SINE Alu 1 293 -20 774 299 37 0 chr2 161028186 161028400 -92228183 - MIR SINE MIR -27 235 14 22 80 0 0 chr2 161028813 161028863 -92227720 + AT_rich Low_complexity Low_complexity 1 50 0 2200 102 3 20 chr2 161029020 161029323 -92227260 - AluSg SINE Alu -12 298 1 664 281 47 51 chr2 161029371 161029627 -92226956 + MIR SINE MIR 7 261 -1 1949 168 12 63 chr2 161029836 161030036 -92226547 - MLT1B LTR MaLR 0 390 220 1057 239 118 14 chr2 161030036 161030392 -92226191 + MSTD LTR MaLR 1 393 -3 1949 168 12 63 chr2 161030392 161030602 -92225981 - MLT1B LTR MaLR -170 220 1 337 284 26 71 chr2 161034419 161034574 -92222009 - L2 LINE L2 0 3313 3166 2093 130 0 13 chr2 161034616 161034932 -92221651 + AluSx SINE Alu 1 312 0 604 207 50 0 chr2 161035180 161035301 -92221282 - MER94 DNA DNA 0 134 8 180 0 0 0 chr2 161036825 161036845 -92219738 + (TTG)n Simple_repeat Simple_repeat 2 21 0 208 330 104 9 chr2 161037147 161037262 -92219321 - MIR SINE MIR -31 231 106 181 261 0 22 chr2 161037301 161037347 -92219236 - L3 LINE CR1 -254 1323 1279 1775 166 13 25 chr2 161037849 161038163 -92218420 + AluJo SINE Alu 1 310 -2 184 179 45 15 chr2 161038349 161038483 -92218100 + (TA)n Simple_repeat Simple_repeat 2 139 0 203 271 0 0 chr2 161038508 161038567 -92218016 + T-rich Low_complexity Low_complexity 1 59 0 201 94 0 0 chr2 161039391 161039423 -92217160 + (CA)n Simple_repeat Simple_repeat 1 32 0 267 256 47 0 chr2 161039469 161039555 -92217028 - L1MC4 LINE L1 -1339 6703 6614 2797 269 107 52 chr2 161039564 161041353 -92215230 - HAL1 LINE L1 -13 2494 609 1799 228 35 35 chr2 161041696 161042188 -92214395 - MLT1D LTR MaLR -13 492 1 363 44 0 0 chr2 161042442 161042487 -92214096 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 2902 65 8 105 chr2 161044246 161044742 -92211841 + LTR7 LTR ERV1 1 448 -2 20204 98 11 14 chr2 161044744 161047744 -92208839 + HERVH LTR ERV1 1 2992 -4721 862 149 20 0 chr2 161047730 161047878 -92208705 + HERVH LTR ERV1 3140 3290 -4423 * 3315 111 2 6 chr2 161047868 161048372 -92208211 + HERVH LTR ERV1 3492 3993 -3720 4232 148 3 1 chr2 161048374 161049035 -92207548 + HERVH LTR ERV1 4488 5149 -2564 * 16219 53 13 3 chr2 161049032 161051129 -92205454 + HERVH LTR ERV1 5597 7713 0 3324 65 5 7 chr2 161051129 161051578 -92205005 + LTR7 LTR ERV1 1 448 -2 1814 145 31 3 chr2 161052247 161052537 -92204046 + AluSq SINE Alu 4 301 -12 626 249 78 54 chr2 161054572 161054777 -92201806 - MLT1E LTR MaLR -354 239 30 28 71 0 0 chr2 161055249 161055305 -92201278 + AT_rich Low_complexity Low_complexity 1 56 0 930 188 81 0 chr2 161055494 161055680 -92200903 - MER2 DNA MER2_type -135 210 10 420 284 90 5 chr2 161055703 161055904 -92200679 + L1ME3A LINE L1 5666 5883 -287 4654 199 14 4 chr2 161057512 161059109 -92197474 - L1MA4 LINE L1 -369 6113 4502 2077 155 19 8 chr2 161059110 161059471 -92197112 - L1PA15 LINE L1 -8 6157 5793 267 293 0 13 chr2 161059592 161059667 -92196916 + CT-rich Low_complexity Low_complexity 5 78 0 5512 128 30 2 chr2 161059668 161060822 -92195761 - L1PA15 LINE L1 -7 6158 4987 7127 256 65 21 chr2 161060828 161064561 -92192022 - L1PA13 LINE L1 -2880 3917 1 2144 220 55 12 chr2 161064583 161065142 -92191441 - L1MA4 LINE L1 -1767 4561 3979 4537 213 26 13 chr2 161065242 161066451 -92190132 - L1MA4 LINE L1 -2624 3704 2480 4077 210 12 21 chr2 161066426 161067236 -92189347 - L1MA4 LINE L1 -4524 804 2 * 211 376 21 0 chr2 161067265 161067358 -92189225 - MIR SINE MIR -70 192 98 471 312 105 71 chr2 161067442 161068134 -92188449 - L2 LINE L2 -80 3233 2504 345 100 0 0 chr2 161068344 161068394 -92188189 + (A)n Simple_repeat Simple_repeat 1 50 0 48 0 0 0 chr2 161068632 161068680 -92187903 + AT_rich Low_complexity Low_complexity 1 48 0 395 303 56 42 chr2 161070196 161070553 -92186030 - L1MC/D LINE L1 -2143 5665 5304 702 302 183 8 chr2 161070727 161071098 -92185485 - LTR16A LTR ERVL -5 445 10 488 244 125 30 chr2 161073424 161073592 -92182991 - MIR SINE MIR -43 219 36 270 362 0 17 chr2 161073888 161074004 -92182579 - L2 LINE L2 0 3313 3200 695 247 73 104 chr2 161074105 161074555 -92182028 + LTR40b LTR ERVL 1 436 -29 193 250 39 0 chr2 161076858 161076910 -92179673 + L2 LINE L2 3259 3312 -1 242 323 83 0 chr2 161076984 161077080 -92179503 - L2 LINE L2 -36 3236 3133 22 0 0 0 chr2 161079604 161079626 -92176957 + AT_rich Low_complexity Low_complexity 1 22 0 254 276 0 20 chr2 161079627 161079725 -92176858 + (TA)n Simple_repeat Simple_repeat 2 97 0 1040 174 26 0 chr2 161079877 161080067 -92176516 - L1MB1 LINE L1 -3 6165 5971 249 86 0 0 chr2 161080069 161080104 -92176479 + L1M3 LINE L1 5705 5739 -429 211 192 27 41 chr2 161080116 161080189 -92176394 + (CA)n Simple_repeat Simple_repeat 2 73 0 321 26 0 0 chr2 161080232 161080270 -92176313 + (CA)n Simple_repeat Simple_repeat 1 38 0 513 260 18 57 chr2 161080371 161080652 -92175931 + L1M4 LINE L1 4549 4818 -1328 942 205 23 5 chr2 161080735 161080955 -92175628 - L1MB1 LINE L1 -264 5904 5676 274 109 40 59 chr2 161080956 161081057 -92175526 + (TG)n Simple_repeat Simple_repeat 2 100 0 1697 137 53 27 chr2 161081168 161081467 -92175116 - AluSg SINE Alu -3 307 1 435 326 107 15 chr2 161081818 161082088 -92174495 - L2 LINE L2 -14 3299 3005 415 275 123 59 chr2 161083103 161083339 -92173244 + MIR SINE MIR 4 254 -8 1656 172 6 38 chr2 161083524 161083968 -92172615 - AluJb SINE Alu 0 436 3 22 35 0 0 chr2 161085437 161085466 -92171117 + AT_rich Low_complexity Low_complexity 1 29 0 30 0 0 0 chr2 161085508 161085538 -92171045 + AT_rich Low_complexity Low_complexity 1 30 0 200 336 65 28 chr2 161086181 161086288 -92170295 + MIR SINE MIR 145 255 -7 300 324 81 14 chr2 161086694 161086842 -92169741 - MIR SINE MIR -88 174 17 24 0 0 0 chr2 161087665 161087689 -92168894 + AT_rich Low_complexity Low_complexity 1 24 0 1210 233 17 31 chr2 161088162 161088449 -92168134 - LTR40a LTR ERVL -2 517 235 523 195 8 51 chr2 161088735 161088853 -92167730 - HERVL68 LTR ERVL -140 5390 5278 271 339 58 36 chr2 161088837 161089111 -92167472 - MER89-int LTR ERV1 -316 6485 6206 * 374 303 70 52 chr2 161089359 161089630 -92166953 - HERVL68 LTR ERVL -328 2709 2434 2991 283 20 37 chr2 161089898 161090126 -92166457 - HERVL68 LTR ERVL -866 4664 4434 2091 128 3 3 chr2 161090126 161090423 -92166160 - AluSx SINE Alu -14 298 2 2991 283 20 37 chr2 161090423 161091142 -92165441 - HERVL68 LTR ERVL -1096 4434 3733 180 176 0 0 chr2 161091932 161091966 -92164617 + (TA)n Simple_repeat Simple_repeat 1 34 0 213 39 0 0 chr2 161092106 161092132 -92164451 + (TC)n Simple_repeat Simple_repeat 2 27 0 1853 152 3 3 chr2 161092138 161092427 -92164156 - AluJb SINE Alu -23 289 1 185 256 0 0 chr2 161093128 161093167 -92163416 - MIR SINE MIR -11 251 213 1463 93 0 34 chr2 161093430 161093635 -92162948 - AluSg SINE Alu -112 198 1 275 273 30 20 chr2 161094240 161094339 -92162244 + L1M4 LINE L1 4513 4612 -1534 22 56 0 0 chr2 161094447 161094483 -92162100 + AT_rich Low_complexity Low_complexity 1 36 0 389 304 29 68 chr2 161094936 161095143 -92161440 - MIR SINE MIR 0 262 64 2090 106 3 0 chr2 161096398 161096715 -92159868 + AluSq SINE Alu 1 318 0 546 347 121 19 chr2 161097739 161098111 -92158472 + L2 LINE L2 2804 3213 -100 195 268 63 47 chr2 161099738 161099865 -92156718 - L3b LINE CR1 -147 1436 1308 402 256 108 23 chr2 161100513 161100642 -92155941 - MIR SINE MIR -14 248 109 278 31 0 0 chr2 161100961 161100993 -92155590 + (T)n Simple_repeat Simple_repeat 1 32 0 606 213 25 0 chr2 161101076 161101198 -92155385 + FLAM_A SINE Alu 16 140 -2 251 266 75 0 chr2 161101328 161101422 -92155161 - L1MC5 LINE L1 -30 7931 7831 2122 104 0 0 chr2 161101557 161101869 -92154714 - AluSc SINE Alu 0 314 3 997 208 62 71 chr2 161102030 161102539 -92154044 - L1MD3 LINE L1 -30 7965 7380 576 127 7 48 chr2 161102626 161102742 -92153841 - MER101 LTR ERV1 0 474 383 228 119 134 75 chr2 161102687 161102754 -92153829 + MER101 LTR ERV1 404 474 0 * 472 208 0 82 chr2 161102754 161102913 -92153670 - L1MC5 LINE L1 -736 7225 7080 554 286 53 60 chr2 161103053 161103354 -92153229 - L1MC4 LINE L1 -974 7068 6770 1967 151 3 0 chr2 161103678 161103983 -92152600 - AluSx SINE Alu -6 306 1 28 71 0 0 chr2 161104748 161104804 -92151779 + AT_rich Low_complexity Low_complexity 1 56 0 220 267 0 17 chr2 161105339 161105399 -92151184 + GA-rich Low_complexity Low_complexity 1 59 0 298 294 25 89 chr2 161105737 161105972 -92150611 + L2 LINE L2 3094 3313 0 1973 148 0 3 chr2 161106106 161106404 -92150179 + AluJb SINE Alu 12 308 -4 24 0 0 0 chr2 161106434 161106458 -92150125 + AT_rich Low_complexity Low_complexity 1 24 0 238 356 89 72 chr2 161107122 161107482 -92149101 + L2 LINE L2 2891 3256 -16 1740 170 0 10 chr2 161107584 161107918 -92148665 - AluJb SINE Alu 0 334 4 26 0 0 0 chr2 161107918 161107944 -92148639 + AT_rich Low_complexity Low_complexity 1 26 0 1775 141 0 0 chr2 161111174 161111443 -92145140 - L1PA15 LINE L1 -12 6153 5885 359 333 27 27 chr2 161212182 161212365 -92044218 + MER5A DNA MER1_type 7 189 0 1343 186 15 40 chr2 161212781 161213109 -92043474 - MER33 DNA MER1_type -4 320 1 277 242 31 94 chr2 161213135 161213263 -92043320 + MIR SINE MIR 49 168 -94 223 361 6 57 chr2 161215275 161215433 -92041150 - L2 LINE L2 -180 3092 2943 1642 244 28 3 chr2 161215639 161215995 -92040588 + MLT1A1 LTR MaLR 1 365 0 481 375 46 21 chr2 161215995 161216278 -92040305 - L2 LINE L2 -602 2712 2423 246 59 0 0 chr2 161217433 161217458 -92039125 + (T)n Simple_repeat Simple_repeat 1 28 -6 2132 119 0 0 chr2 161217458 161217753 -92038830 + AluSg SINE Alu 1 295 -15 246 59 0 0 chr2 161217753 161217761 -92038822 + (T)n Simple_repeat Simple_repeat 27 34 0 21 0 0 0 chr2 161218662 161218683 -92037900 + AT_rich Low_complexity Low_complexity 1 21 0 570 131 0 0 chr2 161218963 161219047 -92037536 + AluS SINE Alu 223 306 -3 408 71 0 0 chr2 161219047 161219103 -92037480 + (TA)n Simple_repeat Simple_repeat 2 57 0 914 284 94 43 chr2 161219810 161220204 -92036379 - LTR33 LTR ERVL -63 458 45 371 294 202 0 chr2 161220592 161220810 -92035773 - MIR SINE MIR 0 262 1 739 301 64 64 chr2 161220814 161221189 -92035394 - L2 LINE L2 -12 3301 2927 290 333 161 6 chr2 161221262 161221430 -92035153 - MIR SINE MIR -32 230 37 362 294 158 52 chr2 161221446 161222140 -92034443 - HAL1 LINE L1 -1274 1233 466 363 222 28 0 chr2 161222201 161222273 -92034310 - L2 LINE L2 -9 3304 3231 23 33 0 0 chr2 161222394 161222424 -92034159 + AT_rich Low_complexity Low_complexity 1 30 0 302 222 6 33 chr2 161225915 161226095 -92030488 + (TA)n Simple_repeat Simple_repeat 1 175 0 190 133 22 22 chr2 161226149 161226194 -92030389 + (TA)n Simple_repeat Simple_repeat 2 46 0 464 314 41 33 chr2 161226653 161226895 -92029688 + L1MEc LINE L1 43 286 -6110 2125 295 81 26 chr2 161226911 161228014 -92028569 + L1MEc LINE L1 336 1498 -4898 1056 174 16 45 chr2 161228054 161228296 -92028287 + L1ME1 LINE L1 5665 5899 -265 1176 167 9 20 chr2 161228301 161228640 -92027943 - Tigger2 DNA MER2_type -11 2707 2280 395 214 0 0 chr2 161228638 161228708 -92027875 + MER8 DNA MER2_type 170 239 0 * 565 277 30 52 chr2 161228708 161228979 -92027604 + L1ME1 LINE L1 5898 6162 -4 211 136 34 34 chr2 161229036 161229095 -92027488 + (CATATA)n Simple_repeat Simple_repeat 6 64 0 257 308 0 0 chr2 161229193 161229258 -92027325 - MIR3 SINE MIR -5 203 139 189 0 0 0 chr2 161229272 161229293 -92027290 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 7000 21 0 1 chr2 161229293 161230109 -92026474 - L1PA3 LINE L1 -10 6145 5331 860 148 19 12 chr2 161231580 161231742 -92024841 + L1PA13 LINE L1 5998 6160 -3 288 302 50 121 chr2 161232264 161232602 -92023981 - L2 LINE L2 -38 3275 2962 202 235 88 15 chr2 161232702 161232770 -92023813 - MIR SINE MIR -31 231 159 244 253 0 13 chr2 161233120 161233195 -92023388 + L1MC4 LINE L1 6626 6699 -1343 222 214 0 0 chr2 161233659 161233701 -92022882 + L2 LINE L2 2669 2710 -604 1307 299 90 1 chr2 161233787 161234317 -92022266 + L2 LINE L2 2732 3306 -7 805 247 11 0 chr2 161235520 161235694 -92020889 + MIR SINE MIR 55 230 -32 658 207 0 0 chr2 161235889 161236005 -92020578 - FLAM_C SINE Alu -17 116 1 1478 277 65 53 chr2 161236077 161236683 -92019900 - L1MCc LINE L1 -4321 2801 2204 405 0 0 0 chr2 161236683 161236728 -92019855 + (TG)n Simple_repeat Simple_repeat 1 45 0 1478 277 65 53 chr2 161236728 161237893 -92018690 - L1MCc LINE L1 -4918 2204 823 249 300 114 24 chr2 161238031 161238241 -92018342 - L1MCc LINE L1 -6104 319 91 312 311 84 9 chr2 161238464 161238689 -92017894 + L1M4 LINE L1 1177 1418 -5124 22 0 0 0 chr2 161238735 161238757 -92017826 + AT_rich Low_complexity Low_complexity 1 22 0 792 251 91 9 chr2 161239022 161239253 -92017330 - MIR SINE MIR -1 261 12 1263 158 0 68 chr2 161242314 161242421 -92014162 - L1PA16 LINE L1 0 6166 6053 1950 110 10 13 chr2 161242421 161242721 -92013862 + AluSg SINE Alu 1 299 -11 1263 158 0 68 chr2 161242721 161242892 -92013691 - L1PA16 LINE L1 -113 6053 5907 198 0 0 0 chr2 161243614 161243636 -92012947 + (T)n Simple_repeat Simple_repeat 1 22 0 1051 261 95 28 chr2 161245115 161245265 -92011318 - L1MDb LINE L1 -3930 2476 2338 1619 173 26 23 chr2 161245265 161245572 -92011011 - AluJb SINE Alu -2 310 3 1051 261 95 28 chr2 161245572 161246039 -92010544 - L1MDb LINE L1 -4068 2338 1792 197 33 33 0 chr2 161246039 161246069 -92010514 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 1051 261 95 28 chr2 161246069 161246239 -92010344 - L1MDb LINE L1 -4614 1792 1635 470 214 156 115 chr2 161246251 161246443 -92010140 - MER20 DNA MER1_type -19 200 1 1074 261 148 26 chr2 161246443 161247224 -92009359 - L1MDb LINE L1 -4766 1640 794 1368 241 123 16 chr2 161247276 161247725 -92008858 + MLT1D LTR MaLR 7 503 -2 2071 132 13 7 chr2 161248558 161248868 -92007715 - AluSx SINE Alu 0 312 1 22 0 0 0 chr2 161249121 161249143 -92007440 + AT_rich Low_complexity Low_complexity 1 22 0 286 174 0 0 chr2 161249217 161249263 -92007320 + L2 LINE L2 3210 3255 -17 2308 52 3 7 chr2 161249297 161249617 -92006966 + AluY SINE Alu 1 319 0 345 24 0 0 chr2 161250385 161250427 -92006156 + (TG)n Simple_repeat Simple_repeat 2 43 0 233 395 24 6 chr2 161250459 161250626 -92005957 + L2 LINE L2 2231 2400 -914 2803 7 0 0 chr2 161252168 161252475 -92004108 - AluYb8 SINE Alu -11 307 1 28 61 0 0 chr2 161252706 161252755 -92003828 + AT_rich Low_complexity Low_complexity 1 49 0 23 0 0 0 chr2 161254010 161254033 -92002550 + AT_rich Low_complexity Low_complexity 1 23 0 288 351 24 36 chr2 161254446 161254614 -92001969 + MER5B DNA MER1_type 6 171 -7 6087 164 25 24 chr2 161254635 161255176 -92001407 + L1MA4 LINE L1 4105 4644 -1656 1893 107 0 4 chr2 161255176 161255438 -92001145 + AluSg SINE Alu 35 295 -15 6087 164 25 24 chr2 161255438 161256844 -91999739 + L1MA4 LINE L1 4644 6060 -240 1889 113 11 0 chr2 161256844 161257110 -91999473 + AluSp SINE Alu 33 301 -12 6087 164 25 24 chr2 161257110 161257350 -91999233 + L1MA4 LINE L1 6060 6298 -2 26 88 0 0 chr2 161258357 161258425 -91998158 + AT_rich Low_complexity Low_complexity 1 68 0 2353 91 0 0 chr2 161258564 161258871 -91997712 - AluY SINE Alu -4 307 1 23 0 0 0 chr2 161259293 161259316 -91997267 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 161259380 161259402 -91997181 + AT_rich Low_complexity Low_complexity 1 22 0 31 26 0 0 chr2 161259631 161259669 -91996914 + AT_rich Low_complexity Low_complexity 1 38 0 1214 255 42 12 chr2 161260781 161261118 -91995465 - MER90 LTR ERV1 -9 605 259 1106 94 0 6 chr2 161262067 161262227 -91994356 - L1MA2 LINE L1 0 6304 6146 2055 136 36 36 chr2 161262263 161262624 -91993959 - THE1B LTR MaLR 0 364 4 11533 98 2 8 chr2 161262632 161264210 -91992373 - THE1B-int LTR MaLR -12 1568 1 2186 130 20 31 chr2 161264210 161264565 -91992018 - THE1B LTR MaLR 0 364 14 335 158 61 0 chr2 161264600 161264765 -91991818 + (TA)n Simple_repeat Simple_repeat 2 176 0 374 57 98 8 chr2 161264808 161264930 -91991653 + (TA)n Simple_repeat Simple_repeat 2 134 0 444 143 0 0 chr2 161265200 161265284 -91991299 + L1MA4A LINE L1 6216 6299 -4 323 325 17 25 chr2 161265284 161265404 -91991179 + MER5B DNA MER1_type 57 175 -3 446 228 0 79 chr2 161265410 161265537 -91991046 + L2 LINE L2 3196 3312 -1 424 308 43 26 chr2 161265724 161266071 -91990512 - L1M4 LINE L1 -1772 4374 4022 352 274 117 11 chr2 161266069 161266248 -91990335 - L1MEc LINE L1 -4638 1672 1475 * 327 302 84 42 chr2 161266351 161266828 -91989755 - L1MEc LINE L1 -5008 1111 740 1981 149 0 0 chr2 161266916 161267212 -91989371 - AluSx SINE Alu -16 296 1 1396 224 32 3 chr2 161268001 161268344 -91988239 + L1MDa LINE L1 1088 1440 -5103 455 279 37 0 chr2 161268377 161268513 -91988070 + L1MDb LINE L1 1734 1874 -4666 2001 210 96 101 chr2 161268569 161268960 -91987623 + L1MDa LINE L1 1514 1905 -4635 2134 122 23 49 chr2 161268960 161269345 -91987238 - THE1C LTR MaLR 0 375 1 2001 210 96 101 chr2 161269345 161269959 -91986624 + L1MDa LINE L1 1905 2514 -4026 * 2580 216 34 8 chr2 161269956 161270567 -91986016 + L1MD2 LINE L1 5712 6338 -21 284 257 97 65 chr2 161271057 161271322 -91985261 + MLT1I LTR MaLR 98 407 -2 302 60 0 20 chr2 161271723 161271773 -91984810 + (TTG)n Simple_repeat Simple_repeat 2 50 0 21 36 0 0 chr2 161271975 161272003 -91984580 + AT_rich Low_complexity Low_complexity 1 28 0 1862 226 48 46 chr2 161272207 161272748 -91983835 - LTR9 LTR ERV1 -63 549 8 1068 224 43 80 chr2 161273718 161273782 -91982801 - MER69 DNA AcHobo -106 2420 2355 2345 86 0 13 chr2 161273782 161274095 -91982488 + AluY SINE Alu 3 311 0 1068 224 43 80 chr2 161274095 161274468 -91982115 - MER69 DNA AcHobo -171 2355 1999 725 279 106 13 chr2 161274631 161274770 -91981813 - MER69 DNA AcHobo -2206 320 195 918 244 67 56 chr2 161274770 161275130 -91981453 - MLT1A1 LTR MaLR -1 364 1 725 279 106 13 chr2 161275130 161275227 -91981356 - MER69 DNA AcHobo -2331 195 62 471 286 39 45 chr2 161275262 161275546 -91981037 + L3 LINE CR1 1084 1438 -139 239 120 0 20 chr2 161276410 161276460 -91980123 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 256 308 69 0 chr2 161276515 161276645 -91979938 - L1ME3A LINE L1 -213 5957 5819 32 75 0 0 chr2 161276711 161276778 -91979805 + AT_rich Low_complexity Low_complexity 1 67 0 4058 219 48 10 chr2 161277395 161278410 -91978173 - L1 LINE L1 -988 5158 4105 1656 227 150 4 chr2 161278492 161278946 -91977637 - MLT2B1 LTR ERVL 0 520 1 4291 162 101 11 chr2 161278946 161279907 -91976676 - ERVL-B1 LTR ERVL -7 5757 4609 534 209 36 107 chr2 161279907 161280103 -91976480 - MLT2B1 LTR ERVL -200 320 139 4554 176 48 6 chr2 161280103 161280894 -91975689 - ERVL-B1 LTR ERVL -1174 4590 3767 2214 125 24 16 chr2 161280947 161281316 -91975267 - L1PB3 LINE L1 -1 6210 5839 249 224 0 0 chr2 161281316 161281374 -91975209 + (TA)n Simple_repeat Simple_repeat 1 58 0 231 24 49 0 chr2 161281375 161281416 -91975167 + LTR66 LTR ERVL 397 439 -171 12098 219 42 17 chr2 161281427 161283368 -91973215 - L1PB3 LINE L1 -363 5848 3956 2294 92 0 0 chr2 161283368 161283674 -91972909 - AluY SINE Alu -5 306 1 12098 219 42 17 chr2 161283674 161286715 -91969868 - L1PB3 LINE L1 -2255 3956 746 6918 211 33 3 chr2 161286755 161288438 -91968145 - ERVL LTR ERVL -1552 3933 2178 1816 224 61 3 chr2 161288438 161288800 -91967783 - MER70A LTR ERVL 0 472 90 910 206 0 6 chr2 161288799 161288959 -91967624 - MER70A LTR ERVL -313 159 1 * 3135 205 17 16 chr2 161288959 161289413 -91967170 - ERVL LTR ERVL -3543 2221 1764 1291 196 18 101 chr2 161289413 161289811 -91966772 + MLT1A1 LTR MaLR 1 365 0 3135 205 17 16 chr2 161289811 161289994 -91966589 - ERVL LTR ERVL -4000 1764 1583 2646 240 19 17 chr2 161290001 161290819 -91965764 - ERVL LTR ERVL -4525 1239 461 721 279 64 50 chr2 161290824 161291305 -91965278 + L1MEc LINE L1 1614 2101 -4295 25 0 0 0 chr2 161292540 161292565 -91964018 + AT_rich Low_complexity Low_complexity 1 25 0 349 318 26 26 chr2 161292845 161293034 -91963549 - MLT1K LTR MaLR 0 588 400 227 332 79 50 chr2 161294163 161294365 -91962218 + MIR SINE MIR 9 216 -46 1137 193 22 29 chr2 161294366 161294640 -91961943 - L1MC3 LINE L1 -22 7763 7492 207 0 0 0 chr2 161295051 161295074 -91961509 + (TTG)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr2 161295257 161295279 -91961304 + AT_rich Low_complexity Low_complexity 1 22 0 236 208 0 28 chr2 161295412 161295484 -91961099 + (CATATA)n Simple_repeat Simple_repeat 5 74 0 1905 80 15 0 chr2 161295947 161296209 -91960374 + L1PA11 LINE L1 5906 6171 -3 2191 86 0 0 chr2 161296295 161296597 -91959986 - AluSc SINE Alu 0 302 1 312 222 0 28 chr2 161296738 161296810 -91959773 - MIR SINE MIR -128 134 65 714 327 65 26 chr2 161298102 161298567 -91958016 + MER20B DNA MER1_type 4 486 -297 21 57 0 0 chr2 161299024 161299059 -91957524 + AT_rich Low_complexity Low_complexity 1 35 0 218 222 0 0 chr2 161299458 161299503 -91957080 + (TTA)n Simple_repeat Simple_repeat 1 45 0 2027 50 8 4 chr2 161300108 161300370 -91956213 + L1PA6 LINE L1 5887 6149 -5 22 35 0 0 chr2 161300413 161300442 -91956141 + AT_rich Low_complexity Low_complexity 1 29 0 196 395 97 8 chr2 161301220 161301344 -91955239 - MER5B DNA MER1_type -42 136 2 13240 225 30 41 chr2 161301756 161303356 -91953227 - L1PA15 LINE L1 0 6489 4873 1106 126 6 0 chr2 161303356 161303518 -91953065 + L1PB3 LINE L1 5980 6147 -7 13240 225 30 41 chr2 161303518 161305420 -91951163 - L1PA15 LINE L1 -1616 4873 3025 533 14 29 0 chr2 161305420 161305489 -91951094 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 13240 225 30 41 chr2 161305489 161306894 -91949689 - L1PA15 LINE L1 -3464 3025 1606 582 188 30 0 chr2 161306931 161307032 -91949551 - U6 snRNA snRNA 0 107 4 325 314 64 19 chr2 161307781 161307937 -91948646 + MIR3 SINE MIR 41 203 -5 21 0 0 0 chr2 161308014 161308035 -91948548 + AT_rich Low_complexity Low_complexity 1 21 0 193 305 49 37 chr2 161308144 161308226 -91948357 + MER5A DNA MER1_type 106 188 -1 1375 269 45 21 chr2 161308413 161308940 -91947643 + L1ME1 LINE L1 5583 6122 -44 40 21 0 0 chr2 161310063 161310110 -91946473 + AT_rich Low_complexity Low_complexity 1 47 0 417 39 0 0 chr2 161310530 161310581 -91946002 + (TC)n Simple_repeat Simple_repeat 1 51 0 324 0 0 0 chr2 161310580 161310616 -91945967 + (CA)n Simple_repeat Simple_repeat 1 36 0 * 306 90 0 45 chr2 161311488 161311555 -91945028 + (TTA)n Simple_repeat Simple_repeat 3 66 0 240 178 0 59 chr2 161311563 161311664 -91944919 + (TA)n Simple_repeat Simple_repeat 2 96 0 374 325 65 25 chr2 161311683 161311883 -91944700 - L2 LINE L2 -636 2678 2471 313 228 13 32 chr2 161311916 161312074 -91944509 + (TA)n Simple_repeat Simple_repeat 1 155 0 1236 316 29 0 chr2 161312532 161312946 -91943637 + L2 LINE L2 1451 1876 -1438 1224 289 65 94 chr2 161312969 161313946 -91942637 + L2 LINE L2 2340 3303 -10 777 215 23 11 chr2 161313946 161314123 -91942460 + MLT1D LTR MaLR 1 179 -326 1122 149 10 25 chr2 161314126 161314327 -91942256 - L1PA15 LINE L1 -1 6164 5967 798 223 65 5 chr2 161314420 161314604 -91941979 + MLT1D LTR MaLR 310 504 -1 21 0 0 0 chr2 161314758 161314779 -91941804 + AT_rich Low_complexity Low_complexity 1 21 0 852 265 114 30 chr2 161315344 161316110 -91940473 - L1MEc LINE L1 -4753 1643 814 1403 172 74 74 chr2 161316450 161316840 -91939743 - MLT1B LTR MaLR 0 390 1 648 221 0 14 chr2 161316840 161316985 -91939598 - MLT1B-int LTR MaLR 0 1735 1593 * 4996 191 76 88 chr2 161316981 161318864 -91937719 + L1M1 LINE L1 11 2231 -5334 2100 171 20 0 chr2 161318864 161319221 -91937362 - THE1B LTR MaLR 0 364 1 8008 204 30 6 chr2 161319221 161320831 -91935752 - THE1B-int LTR MaLR 0 1651 3 2248 135 28 6 chr2 161320833 161321189 -91935394 - THE1B LTR MaLR 0 364 1 7118 175 28 38 chr2 161321189 161321566 -91935017 + L1M1 LINE L1 2227 2606 -4959 241 89 0 0 chr2 161321566 161321611 -91934972 + LTR66 LTR ERVL 394 438 -172 7118 175 28 38 chr2 161321611 161323986 -91932597 + L1M1 LINE L1 2606 4993 -2572 5243 166 33 5 chr2 161323986 161325197 -91931386 + L1PA15 LINE L1 4919 6165 0 5947 187 12 46 chr2 161325244 161326379 -91930204 + L1M1 LINE L1 4981 6083 -1482 183 100 0 0 chr2 161326379 161326409 -91930174 + (CAA)n Simple_repeat Simple_repeat 3 32 0 5947 187 12 46 chr2 161326409 161326809 -91929774 + L1M1 LINE L1 6083 6495 -1070 984 240 87 58 chr2 161327135 161327568 -91929015 - MLT1B-int LTR MaLR -493 878 342 1268 253 48 32 chr2 161327568 161328010 -91928573 + MSTB2 LTR MaLR 9 457 0 1034 181 6 0 chr2 161328010 161328234 -91928349 - MLT1B-int LTR MaLR -1028 343 1 1308 185 23 128 chr2 161328236 161328664 -91927919 - MLT1B LTR MaLR -7 383 1 204 40 0 0 chr2 161329401 161329426 -91927157 + (GA)n Simple_repeat Simple_repeat 2 26 0 29 60 0 0 chr2 161330415 161330465 -91926118 + AT_rich Low_complexity Low_complexity 1 50 0 709 182 0 15 chr2 161331386 161331553 -91925030 + FLAM_C SINE Alu 1 133 0 200 209 30 30 chr2 161331670 161331737 -91924846 + (TTTG)n Simple_repeat Simple_repeat 2 68 0 2436 36 0 23 chr2 161332020 161332324 -91924259 + AluY SINE Alu 1 297 -14 6028 233 46 69 chr2 161332545 161334173 -91922410 + L1M4b LINE L1 5 2016 -4942 524 199 15 66 chr2 161334173 161334309 -91922274 + FLAM_A SINE Alu 4 132 -1 6028 233 46 69 chr2 161334309 161334768 -91921815 + L1M4b LINE L1 2016 2484 -4474 394 130 0 14 chr2 161334771 161334840 -91921743 - MLT1D LTR MaLR 0 505 438 1427 147 126 11 chr2 161334842 161335127 -91921456 + THE1C LTR MaLR 1 318 -57 6842 32 2 0 chr2 161335180 161336329 -91920254 - L1P1 LINE L1 -446 5709 4559 3804 29 2 0 chr2 161336327 161336783 -91919800 + L1P1 LINE L1 4113 4569 -1577 * 2263 92 0 13 chr2 161337523 161337827 -91918756 + AluSc SINE Alu 2 301 -8 272 217 0 85 chr2 161337830 161337936 -91918647 + MER5C DNA MER1_type 227 323 -1 35 41 0 0 chr2 161338444 161338493 -91918090 + AT_rich Low_complexity Low_complexity 1 49 0 2400 72 7 0 chr2 161339887 161340194 -91916389 + AluY SINE Alu 1 309 -2 22 88 0 0 chr2 161340342 161340399 -91916184 + AT_rich Low_complexity Low_complexity 1 57 0 282 239 28 18 chr2 161340399 161340508 -91916075 + (TA)n Simple_repeat Simple_repeat 1 110 0 38 39 0 0 chr2 161340680 161340732 -91915851 + AT_rich Low_complexity Low_complexity 1 52 0 1236 224 98 98 chr2 161341143 161341662 -91914921 + MLT2B1 LTR ERVL 2 520 0 262 219 0 41 chr2 161342769 161342842 -91913741 + MLT2D LTR ERVL 1 70 -344 201 291 70 23 chr2 161342884 161342970 -91913613 + MIR SINE MIR 67 156 -106 189 107 0 0 chr2 161343172 161343200 -91913383 + (TG)n Simple_repeat Simple_repeat 2 29 0 298 163 0 0 chr2 161343205 161343254 -91913329 + MLT2B1 LTR ERVL 472 520 0 204 227 0 0 chr2 161343425 161343469 -91913114 + GA-rich Low_complexity Low_complexity 3 46 0 246 404 66 0 chr2 161344021 161344219 -91912364 + L2 LINE L2 2846 3056 -257 4735 284 58 28 chr2 161344721 161347102 -91909481 + L1MB8 LINE L1 13 2468 -4491 2212 158 64 7 chr2 161347161 161347566 -91909017 + MSTA LTR MaLR 1 428 0 7869 245 67 34 chr2 161347747 161349451 -91907132 + L1MB8 LINE L1 2663 4309 -2648 1273 181 67 26 chr2 161349451 161349721 -91906862 + AluJb SINE Alu 3 283 -29 7869 245 67 34 chr2 161349721 161351248 -91905335 + L1MB8 LINE L1 4309 5967 -990 3011 218 60 15 chr2 161351267 161352060 -91904523 + L1MB8 LINE L1 6149 6980 -9 180 0 0 0 chr2 161352901 161352921 -91903662 + (CA)n Simple_repeat Simple_repeat 2 21 0 701 79 10 0 chr2 161354821 161354922 -91901661 + (TCTA)n Simple_repeat Simple_repeat 3 104 0 2280 91 0 16 chr2 161355830 161356139 -91900444 - AluY SINE Alu -7 304 1 889 244 130 64 chr2 161356218 161356764 -91899819 - MER34C LTR ERV1 -3 582 1 398 172 0 4 chr2 161356998 161357082 -91899501 + MER21A LTR ERV1 1 83 -780 527 119 0 89 chr2 161357183 161357284 -91899299 + MER21A LTR ERV1 74 165 -766 2932 212 64 74 chr2 161357290 161358101 -91898482 + MER21A LTR ERV1 103 905 -26 192 158 0 0 chr2 161358394 161358432 -91898151 + (TCTA)n Simple_repeat Simple_repeat 1 38 0 279 17 0 102 chr2 161358830 161358889 -91897694 + (CATATA)n Simple_repeat Simple_repeat 2 54 0 247 245 181 0 chr2 161358895 161358989 -91897594 + LTR33 LTR ERVL 11 121 -400 1404 216 45 21 chr2 161359149 161359483 -91897100 - MER67C LTR ERV1 -307 403 62 321 157 0 0 chr2 161359533 161359584 -91896999 - MER67D LTR ERV1 -463 51 1 3392 157 15 5 chr2 161361300 161361885 -91894698 - MER39B LTR ERV1 0 653 63 707 103 28 0 chr2 161362077 161362184 -91894399 - MER39B LTR ERV1 -543 110 1 361 306 53 29 chr2 161362730 161362900 -91893683 - MLT1J2 LTR MaLR -276 174 1 22 56 0 0 chr2 161362919 161362955 -91893628 + AT_rich Low_complexity Low_complexity 1 36 0 1631 279 78 26 chr2 161364526 161365355 -91891228 - L1ME3 LINE L1 -202 5960 5096 516 262 132 28 chr2 161365358 161365827 -91890756 - L1ME3 LINE L1 -1289 4857 4340 333 146 0 0 chr2 161365851 161365906 -91890677 - MLT2A2 LTR ERVL 0 453 399 338 126 32 11 chr2 161365906 161366001 -91890582 + (TA)n Simple_repeat Simple_repeat 1 97 0 2782 77 48 0 chr2 161366112 161366489 -91890094 - MLT2A2 LTR ERVL -58 395 1 752 271 164 22 chr2 161366490 161366893 -91889690 - L1ME3 LINE L1 -2871 3275 2816 479 229 28 14 chr2 161366923 161367067 -91889516 - L1MA10 LINE L1 -4 6330 6185 23 0 0 0 chr2 161368015 161368038 -91888545 + AT_rich Low_complexity Low_complexity 1 23 0 24 32 0 0 chr2 161368183 161368214 -91888369 + AT_rich Low_complexity Low_complexity 1 31 0 188 425 34 0 chr2 161368235 161368414 -91888169 - MIR SINE MIR -30 232 48 2066 113 37 3 chr2 161368463 161368763 -91887820 - AluSg SINE Alu 0 310 1 23 0 0 0 chr2 161368791 161368814 -91887769 + AT_rich Low_complexity Low_complexity 1 23 0 21 57 0 0 chr2 161368848 161368883 -91887700 + AT_rich Low_complexity Low_complexity 1 35 0 518 291 58 49 chr2 161369873 161370199 -91886384 - LTR16A LTR ERVL -13 437 109 1385 264 27 56 chr2 161370392 161370816 -91885767 - THE1B LTR MaLR 0 428 3 21 36 0 0 chr2 161370897 161370925 -91885658 + AT_rich Low_complexity Low_complexity 1 28 0 383 348 50 6 chr2 161371403 161371584 -91884999 - MIR SINE MIR -14 248 60 1494 186 78 27 chr2 161372308 161372679 -91883904 - MLT1B LTR MaLR 0 390 1 320 129 24 57 chr2 161372786 161372910 -91883673 + A-rich Low_complexity Low_complexity 1 120 0 336 231 37 9 chr2 161372973 161373081 -91883502 + A-rich Low_complexity Low_complexity 2 112 0 22 35 0 0 chr2 161374157 161374186 -91882397 + AT_rich Low_complexity Low_complexity 1 29 0 210 241 38 0 chr2 161374233 161374312 -91882271 + (TATAA)n Simple_repeat Simple_repeat 2 83 0 21 71 0 0 chr2 161374333 161374375 -91882208 + AT_rich Low_complexity Low_complexity 1 42 0 3174 173 53 14 chr2 161375040 161375686 -91880897 + LTR51 LTR ERV1 1 671 0 2289 164 0 8 chr2 161375708 161376087 -91880496 - MER57A LTR ERV1 -27 376 1 6635 65 6 8 chr2 161376094 161377184 -91879399 + L1PA6 LINE L1 5065 6152 -2 6682 68 3 8 chr2 161376283 161377188 -91879395 + L1PA6 LINE L1 5254 6154 0 438 20 0 0 chr2 161377496 161377547 -91879036 + (CA)n Simple_repeat Simple_repeat 2 52 0 1653 158 40 0 chr2 161377881 161378192 -91878391 + AluSx SINE Alu 1 322 0 692 251 159 14 chr2 161378213 161378496 -91878087 + L1ME3A LINE L1 4608 4931 -1215 21 0 0 0 chr2 161379044 161379065 -91877518 + AT_rich Low_complexity Low_complexity 1 21 0 609 276 35 58 chr2 161379269 161379889 -91876694 + L1ME3A LINE L1 5451 6160 -2 1165 129 46 0 chr2 161380011 161380228 -91876355 - L1MA8 LINE L1 -2 6289 6063 2204 71 46 0 chr2 161380337 161380618 -91875965 + AluY SINE Alu 1 294 -17 259 261 133 13 chr2 161380841 161380952 -91875631 - MIR SINE MIR -59 149 42 180 0 0 0 chr2 161381490 161381510 -91875073 + (TAAAAA)n Simple_repeat Simple_repeat 5 24 0 1583 232 62 23 chr2 161382886 161383325 -91873258 - L1ME2 LINE L1 -90 6074 5619 357 119 24 60 chr2 161383329 161383413 -91873170 + L1ME LINE L1 5634 5714 -452 21 36 0 0 chr2 161387012 161387040 -91869543 + AT_rich Low_complexity Low_complexity 1 28 0 192 77 0 0 chr2 161388402 161388428 -91868155 + (CA)n Simple_repeat Simple_repeat 2 27 0 273 235 47 0 chr2 161388454 161388539 -91868044 + L1MC4 LINE L1 6614 6702 -1340 690 208 0 16 chr2 161388551 161388734 -91867849 + (TA)n Simple_repeat Simple_repeat 1 180 0 218 304 14 14 chr2 161389203 161389272 -91867311 + L2 LINE L2 1851 1919 -1395 3023 35 0 0 chr2 161389844 161390210 -91866373 - L1PA4 LINE L1 -4 6151 5786 2759 18 17 0 chr2 161390210 161390697 -91865886 + L1P2 LINE L1 5053 5545 -610 5078 109 17 17 chr2 161392021 161392385 -91864198 - L1PB1 LINE L1 -3 6148 5785 468 0 0 0 chr2 161392385 161392437 -91864146 + (TA)n Simple_repeat Simple_repeat 2 53 0 5078 109 17 17 chr2 161392437 161392814 -91863769 - L1PB1 LINE L1 -366 5785 5404 2038 137 25 27 chr2 161392814 161393179 -91863404 - THE1B LTR MaLR 0 364 1 5078 109 17 17 chr2 161393179 161393249 -91863334 - L1PB1 LINE L1 -746 5405 5336 257 324 129 0 chr2 161393612 161393890 -91862693 - L1ME LINE L1 -223 5898 5585 23 54 0 0 chr2 161394950 161394987 -91861596 + AT_rich Low_complexity Low_complexity 1 37 0 49 95 0 0 chr2 161395047 161395194 -91861389 + AT_rich Low_complexity Low_complexity 1 147 0 847 207 6 6 chr2 161395390 161395554 -91861029 + FRAM SINE Alu 1 161 -15 23 0 0 0 chr2 161395677 161395700 -91860883 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr2 161395754 161395778 -91860805 + AT_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr2 161396275 161396310 -91860273 + AT_rich Low_complexity Low_complexity 1 35 0 22 70 0 0 chr2 161396373 161396416 -91860167 + AT_rich Low_complexity Low_complexity 1 43 0 2262 154 14 0 chr2 161396919 161397289 -91859294 + THE1C LTR MaLR 1 375 0 21 36 0 0 chr2 161397389 161397417 -91859166 + AT_rich Low_complexity Low_complexity 1 28 0 27 0 0 0 chr2 161397549 161397576 -91859007 + AT_rich Low_complexity Low_complexity 1 27 0 302 244 12 0 chr2 161398064 161398146 -91858437 + (TA)n Simple_repeat Simple_repeat 2 84 0 1323 193 13 23 chr2 161398732 161399032 -91857551 + AluJo SINE Alu 1 297 -15 208 337 30 30 chr2 161399493 161399594 -91856989 - MIR SINE MIR -115 147 47 399 304 9 9 chr2 161400048 161400163 -91856420 - MIR SINE MIR -139 123 9 183 268 0 24 chr2 161400185 161400226 -91856357 + L2 LINE L2 3237 3276 -37 30 0 0 0 chr2 161403551 161403581 -91853002 + AT_rich Low_complexity Low_complexity 1 30 0 873 262 68 64 chr2 161403673 161404112 -91852471 - LTR9 LTR ERV1 0 612 172 37 0 0 0 chr2 161404143 161404180 -91852403 + AT_rich Low_complexity Low_complexity 1 37 0 4727 155 33 23 chr2 161405034 161405406 -91851177 + L1MA8 LINE L1 4955 5322 -969 1896 166 10 0 chr2 161405406 161405702 -91850881 + AluSx SINE Alu 1 299 -13 4727 155 33 23 chr2 161405702 161406500 -91850083 + L1MA8 LINE L1 5322 6139 -152 26 30 0 0 chr2 161406973 161407006 -91849577 + AT_rich Low_complexity Low_complexity 1 33 0 1696 164 0 18 chr2 161408724 161409040 -91847543 - AluJo SINE Alu 0 317 7 271 341 12 0 chr2 161409059 161409141 -91847442 - L2 LINE L2 -2 3311 3229 7767 16 0 0 chr2 161409233 161410463 -91846120 - L1PA2 LINE L1 0 6155 4973 336 318 137 33 chr2 161411672 161411994 -91844589 + L2 LINE L2 2781 3134 -179 560 259 160 14 chr2 161412049 161412261 -91844322 + MLT1D LTR MaLR 3 245 -260 399 245 21 0 chr2 161412318 161412412 -91844171 + MLT1D LTR MaLR 402 497 -8 2908 209 57 29 chr2 161412425 161413180 -91843403 - LTR48 LTR ERV1 -16 742 1 233 244 0 0 chr2 161413204 161413249 -91843334 + L2 LINE L2 3183 3227 -86 207 186 0 23 chr2 161413374 161413417 -91843166 + (CA)n Simple_repeat Simple_repeat 1 42 0 4212 252 26 55 chr2 161414963 161416226 -91840357 + L1MB7 LINE L1 3 1222 -5320 2092 62 15 0 chr2 161416226 161416500 -91840083 + L1PA4 LINE L1 5875 6152 -3 4212 252 26 55 chr2 161416500 161416659 -91839924 + L1MB7 LINE L1 1222 1384 -5158 597 97 0 0 chr2 161416694 161416797 -91839786 + (TAGA)n Simple_repeat Simple_repeat 4 106 0 388 208 0 0 chr2 161416833 161416905 -91839678 + Tigger5 DNA MER2_type 2249 2320 -3 360 253 0 13 chr2 161416905 161416983 -91839600 - Tigger5 DNA MER2_type -2245 78 2 1025 277 16 3 chr2 161416987 161417308 -91839275 + L1MB7 LINE L1 1509 1833 -4813 1477 255 24 6 chr2 161417320 161417811 -91838772 + L1MB7 LINE L1 3192 3691 -2953 * 3240 238 23 37 chr2 161417809 161417868 -91838715 + L1MB7 LINE L1 5295 5353 -1329 1788 165 7 0 chr2 161417868 161418165 -91838418 - AluSx SINE Alu -11 301 3 3240 238 23 37 chr2 161418165 161419497 -91837086 + L1MB7 LINE L1 5353 6657 -25 24 53 0 0 chr2 161419557 161419595 -91836988 + AT_rich Low_complexity Low_complexity 1 38 0 222 226 16 32 chr2 161419757 161419819 -91836764 + MIR SINE MIR 83 143 -119 23 0 0 0 chr2 161419913 161419936 -91836647 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 161421957 161421978 -91834605 + AT_rich Low_complexity Low_complexity 1 21 0 331 253 139 38 chr2 161423366 161423524 -91833059 - LTR41 LTR ERVL -595 178 5 2041 143 22 22 chr2 161423961 161424325 -91832258 - THE1B LTR MaLR 0 364 1 4488 178 19 18 chr2 161424464 161425346 -91831237 + L1MB3 LINE L1 5301 6183 0 255 224 94 24 chr2 161425360 161425445 -91831138 - MIR SINE MIR -156 106 16 191 243 159 37 chr2 161425753 161425860 -91830723 - L2 LINE L2 -3 3310 3191 526 214 156 39 chr2 161426105 161426259 -91830324 - MER5A DNA MER1_type -6 183 12 337 225 116 39 chr2 161426259 161426388 -91830195 + MLT1L LTR MaLR 134 272 -343 306 249 196 48 chr2 161427510 161427719 -91828864 + L2 LINE L2 3072 3311 -2 843 152 22 13 chr2 161427722 161427955 -91828628 + GA-rich Low_complexity Low_complexity 1 235 0 22 94 0 0 chr2 161429156 161429220 -91827363 + AT_rich Low_complexity Low_complexity 1 64 0 22 0 0 0 chr2 161429319 161429341 -91827242 + AT_rich Low_complexity Low_complexity 1 22 0 1597 170 20 47 chr2 161429925 161430225 -91826358 - AluSx SINE Alu -20 292 1 893 213 58 10 chr2 161430338 161430545 -91826038 + MER20 DNA MER1_type 3 219 0 273 196 22 22 chr2 161431342 161431434 -91825149 + GA-rich Low_complexity Low_complexity 3 94 0 24 32 0 0 chr2 161431717 161431748 -91824835 + AT_rich Low_complexity Low_complexity 1 31 0 209 358 0 12 chr2 161431802 161431883 -91824700 - L2 LINE L2 0 3313 3234 23 97 0 0 chr2 161431894 161431966 -91824617 + AT_rich Low_complexity Low_complexity 1 72 0 22 0 0 0 chr2 161432161 161432183 -91824400 + AT_rich Low_complexity Low_complexity 1 22 0 330 281 146 39 chr2 161432444 161432622 -91823961 - MIR SINE MIR -13 249 53 22 35 0 0 chr2 161432667 161432696 -91823887 + AT_rich Low_complexity Low_complexity 1 29 0 602 183 17 0 chr2 161432968 161433083 -91823500 + FRAM SINE Alu 22 138 -38 237 65 0 0 chr2 161434806 161434837 -91821746 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 269 304 0 43 chr2 161435352 161435467 -91821116 - MIR SINE MIR 0 262 153 298 352 0 39 chr2 161435549 161435677 -91820906 - MIR SINE MIR -87 175 53 21 36 0 0 chr2 161435764 161435792 -91820791 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr2 161435912 161435937 -91820646 + AT_rich Low_complexity Low_complexity 1 25 0 281 294 49 11 chr2 161436935 161437119 -91819464 + HAL1 LINE L1 1157 1347 -1160 362 350 30 47 chr2 161437486 161437912 -91818671 + L1MC/D LINE L1 2202 2620 -3526 23 0 0 0 chr2 161438053 161438076 -91818507 + AT_rich Low_complexity Low_complexity 1 23 0 369 292 131 54 chr2 161438151 161438490 -91818093 + L1MC/D LINE L1 3153 3528 -2618 24 24 0 24 chr2 161438719 161438730 -91817853 + AT_rich Low_complexity Low_complexity 1 11 -30 4585 133 6 1 chr2 161438730 161439457 -91817126 + L1MA2 LINE L1 5575 6304 0 24 24 0 24 chr2 161439457 161439487 -91817096 + AT_rich Low_complexity Low_complexity 11 41 0 314 375 31 0 chr2 161439554 161439746 -91816837 + L1MC/D LINE L1 5439 5636 -2172 202 224 0 0 chr2 161440925 161440974 -91815609 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 233 315 59 73 chr2 161442132 161442472 -91814111 + L3 LINE CR1 923 1257 -320 221 302 73 42 chr2 161442585 161442681 -91813902 + L3b LINE CR1 1485 1583 0 203 343 65 9 chr2 161443340 161443448 -91813135 + MIR3 SINE MIR 89 202 -6 2781 86 0 5 chr2 161443702 161444085 -91812498 - L1PA8 LINE L1 -4 6168 5788 3670 86 12 0 chr2 161444085 161444666 -91811917 + L1PA8 LINE L1 5176 5762 -410 2222 109 0 0 chr2 161445021 161445314 -91811269 + AluSg SINE Alu 1 293 -17 23 0 0 0 chr2 161445727 161445750 -91810833 + AT_rich Low_complexity Low_complexity 1 23 0 6261 69 21 0 chr2 161445835 161446680 -91809903 - L1PA7 LINE L1 -5 6149 5287 3389 224 13 9 chr2 161446652 161447415 -91809168 - L1 LINE L1 -1773 4373 3608 * 486 186 76 42 chr2 161447420 161447538 -91809045 - MER31B LTR ERV1 -344 122 1 203 349 83 54 chr2 161447943 161448184 -91808399 + MIR SINE MIR 13 260 -2 2192 92 13 3 chr2 161449111 161449415 -91807168 + AluY SINE Alu 3 309 -2 210 71 0 0 chr2 161449416 161449444 -91807139 + (GGAGAA)n Simple_repeat Simple_repeat 4 31 0 2018 116 0 7 chr2 161449457 161449751 -91806832 + AluSx SINE Alu 1 292 -20 2262 227 55 96 chr2 161450404 161451241 -91805342 - MER21B LTR ERV1 -60 803 1 37 60 0 12 chr2 161451548 161451582 -91805001 + AT_rich Low_complexity Low_complexity 1 34 -48 2115 111 0 0 chr2 161451582 161451870 -91804713 - AluSx SINE Alu -13 299 12 37 60 0 12 chr2 161451870 161451918 -91804665 + AT_rich Low_complexity Low_complexity 34 82 0 2292 90 0 3 chr2 161451930 161452242 -91804341 - AluY SINE Alu 0 311 1 272 27 27 0 chr2 161452487 161452524 -91804059 + (TA)n Simple_repeat Simple_repeat 2 39 0 776 198 54 6 chr2 161454588 161454755 -91801828 + FRAM SINE Alu 1 175 -1 427 319 53 15 chr2 161454961 161455416 -91801167 + L1M4 LINE L1 4771 5242 -904 419 228 16 8 chr2 161455442 161455565 -91801018 - L1M LINE L1 -2422 5386 5263 1138 214 111 4 chr2 161455567 161455663 -91800920 - MER93b LTR ERV1 -79 294 210 2441 131 8 5 chr2 161455663 161456037 -91800546 - THE1C LTR MaLR 0 375 1 1138 214 111 4 chr2 161456037 161456202 -91800381 - MER93b LTR ERV1 -163 210 5 815 232 71 60 chr2 161456211 161456547 -91800036 - MER57-int LTR ERV1 -398 7139 6800 2727 281 61 29 chr2 161456779 161457203 -91799380 + L1MC4a LINE L1 6186 6595 -1213 2095 116 0 7 chr2 161457203 161457496 -91799087 + AluSc SINE Alu 1 291 -18 227 79 26 0 chr2 161457506 161457544 -91799039 + (TG)n Simple_repeat Simple_repeat 2 40 0 2727 281 61 29 chr2 161457544 161458328 -91798255 + L1MC4a LINE L1 6603 7444 -364 1203 228 16 5 chr2 161458338 161458590 -91797993 - MLT1D LTR MaLR -9 496 252 242 71 0 24 chr2 161458731 161458773 -91797810 + (GA)n Simple_repeat Simple_repeat 2 42 0 4214 127 17 19 chr2 161458787 161459804 -91796779 + L1PA15 LINE L1 5067 6160 -5 279 0 0 0 chr2 161459834 161459865 -91796718 + (CA)n Simple_repeat Simple_repeat 2 32 0 243 0 0 0 chr2 161459864 161459891 -91796692 + (GA)n Simple_repeat Simple_repeat 2 28 0 * 7807 17 0 0 chr2 161460228 161461412 -91795171 - L1PA2 LINE L1 0 6155 4972 4601 17 0 0 chr2 161461412 161461945 -91794638 + L1PA2 LINE L1 4445 4977 -1169 200 208 0 0 chr2 161462584 161462632 -91793951 + T-rich Low_complexity Low_complexity 1 48 0 3084 42 0 8 chr2 161465223 161465609 -91790974 + L1PA4 LINE L1 5770 6152 -3 772 160 15 0 chr2 161466415 161466546 -91790037 + FLAM_A SINE Alu 1 133 0 35 54 0 0 chr2 161466827 161466883 -91789700 + AT_rich Low_complexity Low_complexity 1 56 0 5218 168 81 16 chr2 161467735 161468846 -91787737 + L1MC1 LINE L1 5069 6256 -77 399 56 0 0 chr2 161468846 161468900 -91787683 + (TG)n Simple_repeat Simple_repeat 1 54 0 5218 168 81 16 chr2 161468900 161468983 -91787600 + L1MC1 LINE L1 6256 6332 -1 22 0 0 0 chr2 161471311 161471333 -91785250 + AT_rich Low_complexity Low_complexity 1 22 0 376 291 85 20 chr2 161472194 161472393 -91784190 + L1M4 LINE L1 4027 4238 -1908 214 261 0 15 chr2 161473332 161473397 -91783186 + (TATATG)n Simple_repeat Simple_repeat 2 65 0 1938 118 0 4 chr2 161475009 161475310 -91781273 - AluSg SINE Alu 0 300 1 26 30 0 0 chr2 161475320 161475353 -91781230 + AT_rich Low_complexity Low_complexity 1 33 0 689 62 0 54 chr2 161477595 161477707 -91778876 + L1PA6 LINE L1 6049 6154 0 270 333 0 13 chr2 161478151 161478301 -91778282 + L1 LINE L1 3477 3624 -2522 427 227 51 40 chr2 161478501 161478677 -91777906 + L1ME LINE L1 622 799 -5271 814 262 84 62 chr2 161478707 161479372 -91777211 + L1ME LINE L1 781 1460 -4620 * 977 296 121 17 chr2 161479362 161479815 -91776768 + L1MEc LINE L1 688 1092 -5304 410 0 20 0 chr2 161479815 161479865 -91776718 + (CA)n Simple_repeat Simple_repeat 2 52 0 977 296 121 17 chr2 161479865 161480255 -91776328 + L1MEc LINE L1 1092 1619 -4777 1475 342 65 25 chr2 161480255 161481564 -91775019 - HERV16 LTR ERVL -1938 3058 1664 1251 340 21 12 chr2 161481592 161482109 -91774474 - HERV16 LTR ERVL -3432 1564 1043 199 258 32 0 chr2 161482663 161482725 -91773858 + MIR SINE MIR 66 129 -133 1111 170 39 27 chr2 161482851 161483110 -91773473 + L1MA4 LINE L1 6039 6300 0 1948 211 7 56 chr2 161484533 161485167 -91771416 + L1MD3 LINE L1 7212 7828 -10 25 31 0 0 chr2 161485503 161485535 -91771048 + AT_rich Low_complexity Low_complexity 1 32 0 354 360 87 35 chr2 161485604 161485973 -91770610 - L2 LINE L2 -2 3311 2924 204 281 35 0 chr2 161486513 161486570 -91770013 - L2 LINE L2 -517 2797 2739 297 206 44 0 chr2 161487506 161487574 -91769009 - L1M4 LINE L1 -1394 5146 5076 335 205 71 31 chr2 161487689 161487816 -91768767 + L1M4 LINE L1 4595 4726 -1420 316 320 42 33 chr2 161487840 161488174 -91768409 - L1MDa LINE L1 -2538 4002 3666 508 269 118 23 chr2 161488175 161488384 -91768199 - L1MDa LINE L1 -2846 3694 3506 1164 120 21 0 chr2 161488384 161488575 -91768008 - L1MA5A LINE L1 0 6297 6103 508 269 118 23 chr2 161488575 161489434 -91767149 - L1MDa LINE L1 -3034 3506 2448 629 293 15 11 chr2 161489582 161489848 -91766735 + L1MC4 LINE L1 7775 8041 -1 180 357 0 0 chr2 161491283 161491325 -91765258 - L2 LINE L2 -16 3256 3215 1828 205 125 0 chr2 161491357 161491782 -91764801 - MLT1D LTR MaLR 0 505 28 547 149 0 0 chr2 161491782 161491869 -91764714 - AluS SINE Alu -226 87 1 241 219 0 0 chr2 161491871 161491912 -91764671 - MLT1D LTR MaLR -464 41 1 197 324 0 14 chr2 161494532 161494603 -91761980 + L3 LINE CR1 1248 1317 -260 1681 209 11 17 chr2 161494655 161495009 -91761574 - MLT1A1 LTR MaLR -4 361 10 292 157 20 0 chr2 161495026 161495077 -91761506 - MLT2C2 LTR ERVL 0 464 413 22 0 0 0 chr2 161495185 161495207 -91761376 + AT_rich Low_complexity Low_complexity 1 22 0 2028 128 7 0 chr2 161496151 161496448 -91760135 + AluSp SINE Alu 1 299 -14 27 62 0 0 chr2 161496650 161496698 -91759885 + AT_rich Low_complexity Low_complexity 1 48 0 506 285 123 52 chr2 161496738 161497274 -91759309 + HAL1b LINE L1 280 853 -495 348 299 74 32 chr2 161497577 161497794 -91758789 + L1MC4a LINE L1 2205 2430 -3716 576 265 56 0 chr2 161497941 161498103 -91758480 - MER76 LTR ERV -513 175 5 2838 236 35 57 chr2 161498308 161499231 -91757352 + L1MC4a LINE L1 5376 6277 -1531 697 195 13 119 chr2 161499441 161499677 -91756906 + MER20 DNA MER1_type 4 214 -5 1742 154 11 0 chr2 161500539 161500843 -91755740 - AluY SINE Alu 0 307 1 336 102 0 0 chr2 161501111 161501160 -91755423 + (TA)n Simple_repeat Simple_repeat 2 50 0 1756 55 38 0 chr2 161501161 161501396 -91755187 - L1PA7 LINE L1 -14 6140 5897 387 311 57 34 chr2 161501501 161501678 -91754905 - MIR SINE MIR 0 262 82 349 259 218 7 chr2 161501944 161502091 -91754492 + MIR SINE MIR 29 206 -56 183 156 0 0 chr2 161502147 161502179 -91754404 + (TTA)n Simple_repeat Simple_repeat 2 33 0 67 49 0 0 chr2 161502979 161503081 -91753502 + AT_rich Low_complexity Low_complexity 1 102 0 6241 214 24 32 chr2 161503413 161503600 -91752983 - L1M2 LINE L1 -4296 2553 2366 5203 123 15 29 chr2 161503600 161504471 -91752112 - L1MA2 LINE L1 0 6304 5446 6241 214 24 32 chr2 161504471 161505770 -91750813 - L1M2 LINE L1 -4483 2366 1078 21 36 0 0 chr2 161507349 161507377 -91749206 + AT_rich Low_complexity Low_complexity 1 28 0 234 279 57 0 chr2 161507393 161507515 -91749068 + L1ME1 LINE L1 3321 3449 -2697 1644 190 33 49 chr2 161507589 161507979 -91748604 + Tigger7 DNA MER2_type 2204 2587 0 1373 259 33 15 chr2 161507980 161508378 -91748205 + L1ME1 LINE L1 5680 6084 -82 * 1960 226 60 34 chr2 161508374 161509030 -91747553 - L1 LINE L1 -1994 4152 3480 475 268 35 0 chr2 161509001 161509143 -91747440 - L1M4c LINE L1 -4920 1464 1318 * 287 232 11 42 chr2 161509143 161509238 -91747345 + (TATATG)n Simple_repeat Simple_repeat 2 93 0 670 249 23 32 chr2 161509260 161509481 -91747102 - L1M4c LINE L1 -5091 1293 1075 328 241 0 0 chr2 161509485 161509564 -91747019 + L1ME3A LINE L1 5872 5950 -220 24 53 0 0 chr2 161509775 161509813 -91746770 + AT_rich Low_complexity Low_complexity 1 38 0 315 307 44 36 chr2 161511578 161511715 -91744868 - MIR SINE MIR -111 151 14 181 263 20 0 chr2 161511968 161512067 -91744516 + GA-rich Low_complexity Low_complexity 4 104 0 199 306 0 0 chr2 161513783 161513832 -91742751 + MIR SINE MIR 109 157 -105 210 234 0 31 chr2 161513837 161513901 -91742682 + T-rich Low_complexity Low_complexity 3 64 0 4842 246 53 24 chr2 161515445 161516836 -91739747 + L1M1 LINE L1 1879 3228 -4337 285 51 0 0 chr2 161516836 161516875 -91739708 + (TG)n Simple_repeat Simple_repeat 2 40 0 4842 246 53 24 chr2 161516875 161517980 -91738603 + L1M1 LINE L1 3228 4456 -3109 2032 134 3 0 chr2 161517980 161518286 -91738297 + AluSx SINE Alu 1 307 -5 4842 246 53 24 chr2 161518286 161518326 -91738257 + L1M1 LINE L1 4456 4493 -3072 8709 184 39 14 chr2 161518744 161520667 -91735916 + L1M1 LINE L1 4492 6463 -1102 6284 92 33 0 chr2 161521436 161522431 -91734152 - L1PA10 LINE L1 -3 6165 5156 219 323 16 0 chr2 161522915 161522977 -91733606 - L2 LINE L2 -5 3267 3205 14407 171 30 8 chr2 161523113 161526088 -91730495 - L1MA3 LINE L1 0 7724 4816 2364 81 3 0 chr2 161526088 161526386 -91730197 - AluSp SINE Alu -14 299 1 14407 171 30 8 chr2 161526386 161530462 -91726121 - L1MA3 LINE L1 -2908 4816 500 1797 133 58 20 chr2 161530462 161530755 -91725828 - AluSx SINE Alu -8 304 1 14407 171 30 8 chr2 161530755 161531241 -91725342 - L1MA3 LINE L1 -7224 500 26 2242 123 0 0 chr2 161531654 161531964 -91724619 - AluSx SINE Alu 0 312 3 21 36 0 0 chr2 161533050 161533078 -91723505 + AT_rich Low_complexity Low_complexity 1 28 0 29 0 0 62 chr2 161535570 161535618 -91720965 + AT_rich Low_complexity Low_complexity 1 45 0 235 343 38 19 chr2 161535746 161535851 -91720732 - MIR SINE MIR -151 111 5 14957 162 37 7 chr2 161536309 161539062 -91717521 + L1M4 LINE L1 901 3737 -3828 946 126 103 0 chr2 161539063 161539237 -91717346 + L1MA2 LINE L1 6112 6303 -1 349 239 39 52 chr2 161539289 161539444 -91717139 + L1M4 LINE L1 4626 4778 -2787 12378 86 23 4 chr2 161539449 161541764 -91714819 - L1PA7 LINE L1 -259 5895 3558 1699 68 0 5 chr2 161541764 161542011 -91714572 + L1PA7 LINE L1 5919 6166 0 265 221 65 0 chr2 161542094 161542171 -91714412 + L1ME3A LINE L1 6084 6165 -5 754 292 79 50 chr2 161542186 161543163 -91713420 + L1ME3A LINE L1 4326 5330 -816 349 43 0 0 chr2 161543217 161543264 -91713319 - MADE1 DNA Mariner -33 47 1 428 327 85 24 chr2 161543295 161543708 -91712875 + L1ME3A LINE L1 5410 5847 -323 1079 281 62 9 chr2 161544484 161544918 -91711665 + L1M4 LINE L1 6296 6752 -813 782 170 19 6 chr2 161544939 161545098 -91711485 + L1MD1 LINE L1 6072 6232 -10 520 231 16 33 chr2 161545113 161545234 -91711349 + FLAM_A SINE Alu 12 130 -12 189 224 90 30 chr2 161545492 161545559 -91711024 - MIR3 SINE MIR -26 182 112 679 232 11 10 chr2 161545561 161545763 -91710820 - MER5A DNA MER1_type -7 182 2 28 0 0 0 chr2 161545866 161545894 -91710689 + AT_rich Low_complexity Low_complexity 1 28 0 227 265 48 12 chr2 161547432 161547515 -91709068 - L1ME LINE L1 -460 5661 5576 1904 149 40 0 chr2 161547545 161547841 -91708742 - AluSx SINE Alu -4 308 1 414 319 42 33 chr2 161547849 161548090 -91708493 - ERVL LTR ERVL -1039 3957 3715 1630 327 71 61 chr2 161548327 161549278 -91707305 - ERVL LTR ERVL -1595 3694 2754 1283 198 34 58 chr2 161549278 161549571 -91707012 + AluJo SINE Alu 2 287 -25 1630 327 71 61 chr2 161549571 161549612 -91706971 - ERVL LTR ERVL -2535 2754 2715 426 79 0 0 chr2 161549612 161549675 -91706908 + (CATA)n Simple_repeat Simple_repeat 2 64 0 1630 327 71 61 chr2 161549675 161550176 -91706407 - ERVL LTR ERVL -2574 2715 2214 261 242 39 110 chr2 161550197 161550283 -91706300 - MER110-int LTR ERV1 -540 4107 4036 2138 115 3 0 chr2 161550283 161550591 -91705992 + AluSp SINE Alu 1 309 0 261 242 39 110 chr2 161550591 161550683 -91705900 - MER110-int LTR ERV1 -611 4036 3939 270 0 0 0 chr2 161550745 161550775 -91705808 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 901 276 5 5 chr2 161551211 161551432 -91705151 - MER58A DNA MER1_type -2 222 2 29 0 0 0 chr2 161551830 161551859 -91704724 + AT_rich Low_complexity Low_complexity 1 29 0 465 321 64 55 chr2 161552462 161552823 -91703760 - LTR16C LTR ERVL -39 452 89 2798 202 31 16 chr2 161553141 161553431 -91703152 - MER90 LTR ERV1 0 614 330 2055 115 0 20 chr2 161553431 161553727 -91702856 - AluSc SINE Alu -19 290 1 2798 202 31 16 chr2 161553727 161554041 -91702542 - MER90 LTR ERV1 -284 330 1 2461 121 8 11 chr2 161554138 161554511 -91702072 + THE1C LTR MaLR 1 372 -3 29 28 0 0 chr2 161554650 161554686 -91701897 + AT_rich Low_complexity Low_complexity 1 36 0 26 64 0 0 chr2 161555066 161555113 -91701470 + AT_rich Low_complexity Low_complexity 1 47 0 24 77 0 0 chr2 161556806 161556858 -91699725 + AT_rich Low_complexity Low_complexity 1 52 0 22 94 0 0 chr2 161557006 161557070 -91699513 + AT_rich Low_complexity Low_complexity 1 64 0 925 242 59 108 chr2 161557163 161557618 -91698965 - MLT1H LTR MaLR -113 436 4 261 309 60 0 chr2 161557647 161557731 -91698852 + L2 LINE L2 3225 3313 0 26 0 0 0 chr2 161558139 161558165 -91698418 + AT_rich Low_complexity Low_complexity 1 26 0 26 0 0 0 chr2 161558976 161559002 -91697581 + AT_rich Low_complexity Low_complexity 1 26 0 307 95 0 60 chr2 161563390 161563474 -91693109 + (TTATA)n Simple_repeat Simple_repeat 5 83 0 1352 262 83 9 chr2 161563505 161563937 -91692646 + L1ME1 LINE L1 5455 5918 -248 1354 260 63 85 chr2 161564079 161564918 -91691665 + L1MC5 LINE L1 6710 7530 -431 21 57 0 0 chr2 161565267 161565302 -91691281 + AT_rich Low_complexity Low_complexity 1 35 0 453 244 167 0 chr2 161565818 161565986 -91690597 + MER5C DNA MER1_type 129 324 0 444 101 0 0 chr2 161566327 161566396 -91690187 - L1PA13 LINE L1 -2 6161 6093 731 254 110 108 chr2 161567074 161567673 -91688910 - L1ME3 LINE L1 -230 5932 5333 230 357 19 45 chr2 161567684 161567841 -91688742 - L2 LINE L2 -905 2409 2257 291 196 80 27 chr2 161569273 161569385 -91687198 - Charlie7 DNA MER1_type -2451 161 44 330 383 25 0 chr2 161570811 161571046 -91685537 + L2 LINE L2 2380 2620 -694 441 352 46 29 chr2 161572053 161572334 -91684249 + MLT1J LTR MaLR 79 364 -147 22 70 0 0 chr2 161572361 161572404 -91684179 + AT_rich Low_complexity Low_complexity 1 43 0 193 320 21 21 chr2 161572465 161572562 -91684021 + L2 LINE L2 2619 2715 -599 728 228 60 9 chr2 161572562 161572777 -91683806 + L1MCc LINE L1 17 242 -6181 1066 213 114 47 chr2 161573075 161573497 -91683086 + L1MCc LINE L1 1087 1536 -4887 258 394 45 15 chr2 161574250 161574514 -91682069 - LTR16C LTR ERVL -146 345 74 180 0 0 0 chr2 161574755 161574775 -91681808 + (CA)n Simple_repeat Simple_repeat 2 21 0 1728 181 0 3 chr2 161574850 161575142 -91681441 + AluJb SINE Alu 5 295 -17 5087 194 26 11 chr2 161576225 161578146 -91678437 + L1PA16 LINE L1 4204 6157 -9 697 251 10 15 chr2 161578586 161578781 -91677802 + L1MCc LINE L1 2279 2472 -4650 441 267 60 44 chr2 161578800 161579115 -91677468 + L1MCc LINE L1 3600 3919 -3022 739 105 0 0 chr2 161579116 161579221 -91677362 + U6 snRNA snRNA 1 105 -2 2697 209 10 3 chr2 161579231 161579810 -91676773 + L1P LINE L1 1259 1841 -4305 2233 39 0 52 chr2 161579810 161580115 -91676468 - L1PA4 LINE L1 0 6155 5867 246 32 0 0 chr2 161580115 161580146 -91676437 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1264 92 0 0 chr2 161580146 161580310 -91676273 - AluY SINE Alu -29 282 119 1345 192 50 3 chr2 161580315 161580612 -91675971 - AluY SINE Alu 0 311 1 230 299 31 21 chr2 161580614 161580711 -91675872 - L1P LINE L1 -1692 4454 4357 207 0 0 0 chr2 161580891 161580914 -91675669 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 779 224 0 0 chr2 161580914 161581078 -91675505 - AluY SINE Alu -29 282 119 2312 54 51 0 chr2 161581083 161581379 -91675204 - AluY SINE Alu 0 311 1 4730 206 21 3 chr2 161581381 161582396 -91674187 - L1P LINE L1 -1692 4454 3422 1710 112 15 38 chr2 161582416 161582683 -91673900 - AluSx SINE Alu -48 264 4 1172 266 47 0 chr2 161582686 161583051 -91673532 - L1P LINE L1 -3104 3042 2661 1901 135 0 0 chr2 161583170 161583436 -91673147 + AluSq SINE Alu 1 266 -47 1258 53 12 0 chr2 161583452 161583623 -91672960 + (GAAA)n Simple_repeat Simple_repeat 2 174 0 716 382 26 19 chr2 161584015 161584439 -91672144 + LTR16A LTR ERVL 18 444 -6 1518 307 57 36 chr2 161584444 161585580 -91671003 + HERV16 LTR ERVL 1 1178 -3818 2596 319 74 53 chr2 161586291 161586622 -91669961 + HERV16 LTR ERVL 1789 2111 -3487 1221 207 10 67 chr2 161586622 161586922 -91669661 - AluJo SINE Alu -27 285 3 2596 319 74 53 chr2 161586922 161588444 -91668139 + HERV16 LTR ERVL 2111 3697 -1901 585 375 46 22 chr2 161588858 161589450 -91667133 + HERV16 LTR ERVL 4508 5113 -651 2319 91 3 0 chr2 161589485 161589793 -91666790 - AluY SINE Alu -2 309 1 2081 180 0 30 chr2 161590184 161590579 -91666004 - MLT1B LTR MaLR -7 383 1 404 345 43 59 chr2 161590646 161590950 -91665633 + LTR16A LTR ERVL 105 403 -47 925 278 48 75 chr2 161591047 161591583 -91665000 - L1ME3A LINE L1 -213 5957 5436 616 306 95 28 chr2 161591597 161592209 -91664374 - L1ME3A LINE L1 -788 5358 4706 293 281 30 43 chr2 161592341 161592505 -91664078 + L1MC3 LINE L1 422 583 -5947 24 0 0 0 chr2 161592705 161592729 -91663854 + AT_rich Low_complexity Low_complexity 1 24 0 1938 138 24 53 chr2 161592931 161593309 -91663274 + MER4E LTR ERV1 1 367 -399 1000 57 0 0 chr2 161593302 161593424 -91663159 + MER4E LTR ERV1 645 766 0 * 23 33 0 0 chr2 161593440 161593470 -91663113 + AT_rich Low_complexity Low_complexity 1 30 0 1221 167 12 56 chr2 161593485 161593638 -91662945 - Tigger5 DNA MER2_type 0 2323 2184 2038 136 0 13 chr2 161593638 161593948 -91662635 + AluSx SINE Alu 3 308 -4 1221 167 12 56 chr2 161593948 161594046 -91662537 - Tigger5 DNA MER2_type -139 2184 2083 1128 232 9 9 chr2 161594037 161594270 -91662313 - Tigger5 DNA MER2_type -2090 233 1 * 415 279 58 47 chr2 161594329 161594673 -91661910 - L1M4 LINE L1 -798 5348 5001 * 743 261 131 17 chr2 161594667 161595264 -91661319 - L1M4 LINE L1 -2726 3420 2756 29054 125 9 31 chr2 161595269 161601508 -91655075 - L1PA8 LINE L1 -7 6480 264 619 216 141 30 chr2 161601622 161601853 -91654730 - L1 LINE L1 -2177 3969 3713 842 272 23 33 chr2 161601863 161602257 -91654326 - L1 LINE L1 -2496 3650 3261 21 0 0 0 chr2 161603167 161603188 -91653395 + AT_rich Low_complexity Low_complexity 1 21 0 226 306 36 0 chr2 161603491 161603602 -91652981 + L1MC3 LINE L1 1295 1409 -5131 953 260 99 36 chr2 161604204 161604566 -91652017 - MSTD LTR MaLR -6 390 6 731 258 70 65 chr2 161604822 161605689 -91650894 + L1ME1 LINE L1 1266 2138 -4803 6363 218 45 6 chr2 161605692 161607321 -91649262 + L1ME1 LINE L1 3566 5258 -1683 586 256 87 35 chr2 161608072 161608558 -91648025 + L1ME1 LINE L1 5874 6379 -578 3744 175 12 4 chr2 161608585 161609309 -91647274 - L1 LINE L1 -1744 4402 3673 3123 257 43 38 chr2 161609306 161611078 -91645505 + L1MC3 LINE L1 4452 5784 -756 * 2456 191 55 8 chr2 161611075 161611587 -91644996 + L1MC3 LINE L1 7636 8171 -8 * 855 274 62 18 chr2 161611644 161611933 -91644650 + L1MD2 LINE L1 5808 6119 -240 1332 252 88 27 chr2 161612216 161612694 -91643889 + L1ME1 LINE L1 6448 6950 -11 254 315 25 9 chr2 161613226 161613441 -91643142 - L1ME LINE L1 -688 5482 5265 302 296 217 18 chr2 161613810 161614438 -91642145 - L1ME LINE L1 -1428 4718 3966 317 302 73 21 chr2 161614568 161614760 -91641823 - L1ME LINE L1 -2388 3758 3557 282 305 113 40 chr2 161614973 161615442 -91641141 - L1ME LINE L1 -3181 2965 2463 25 75 0 0 chr2 161615613 161615666 -91640917 + AT_rich Low_complexity Low_complexity 1 53 0 373 15 60 15 chr2 161615957 161616024 -91640559 + (TA)n Simple_repeat Simple_repeat 1 70 0 2494 182 22 4 chr2 161616192 161616691 -91639892 - L1MA8 LINE L1 -22 6269 5762 812 179 0 0 chr2 161616706 161616846 -91639737 + L1MA8 LINE L1 5601 5740 -560 * 2834 190 111 6 chr2 161616845 161617557 -91639026 - L1MA8 LINE L1 -1206 4940 4154 1401 152 0 0 chr2 161617795 161618019 -91638564 - L1P LINE L1 -1034 5112 4889 2537 159 4 4 chr2 161618019 161618484 -91638099 + L1P LINE L1 4402 4866 -1280 400 280 28 82 chr2 161619189 161619371 -91637212 - MER5B DNA MER1_type 0 178 7 664 273 13 7 chr2 161619518 161619672 -91636911 + MER5B DNA MER1_type 20 174 -4 342 351 13 20 chr2 161619669 161619820 -91636763 - L2 LINE L2 -325 2988 2839 * 30 27 0 0 chr2 161620403 161620440 -91636143 + AT_rich Low_complexity Low_complexity 1 37 0 244 327 145 0 chr2 161620714 161620873 -91635710 - MLT1I LTR MaLR -148 261 80 374 274 59 87 chr2 161621108 161621685 -91634898 + L1ME LINE L1 4075 4635 -1511 253 250 13 0 chr2 161621777 161621853 -91634730 + L1ME LINE L1 5743 5819 -302 34 42 0 0 chr2 161621889 161621937 -91634646 + AT_rich Low_complexity Low_complexity 1 48 0 24 0 0 0 chr2 161622213 161622237 -91634346 + AT_rich Low_complexity Low_complexity 1 24 0 183 284 88 20 chr2 161623055 161623157 -91633426 - MIR SINE MIR -70 192 84 494 331 71 40 chr2 161623805 161624131 -91632452 + L3 LINE CR1 633 968 -609 373 182 20 20 chr2 161624219 161624318 -91632265 + (TATAA)n Simple_repeat Simple_repeat 5 103 0 509 168 36 0 chr2 161624318 161624485 -91632098 + (TTATA)n Simple_repeat Simple_repeat 5 177 0 422 353 64 8 chr2 161624511 161624746 -91631837 + L3 LINE CR1 1170 1417 -160 23 0 0 0 chr2 161624921 161624944 -91631639 + AT_rich Low_complexity Low_complexity 1 23 0 227 182 0 23 chr2 161625795 161625839 -91630744 + CT-rich Low_complexity Low_complexity 3 45 0 207 220 0 0 chr2 161626366 161626416 -91630167 + GA-rich Low_complexity Low_complexity 3 52 0 26 50 0 0 chr2 161628703 161628743 -91627840 + AT_rich Low_complexity Low_complexity 1 40 0 21 71 0 0 chr2 161628897 161628939 -91627644 + AT_rich Low_complexity Low_complexity 1 42 0 32 57 0 0 chr2 161629613 161629666 -91626917 + AT_rich Low_complexity Low_complexity 1 53 0 180 0 0 0 chr2 161631993 161632013 -91624570 + (TAAAA)n Simple_repeat Simple_repeat 4 23 0 484 224 65 0 chr2 161632623 161632730 -91623853 + MER81 DNA DNA 1 114 0 387 336 96 46 chr2 161633433 161633757 -91622826 + HAL1b LINE L1 55 394 -954 303 274 78 46 chr2 161633884 161634037 -91622546 + HAL1b LINE L1 693 850 -498 43 85 0 0 chr2 161634153 161634259 -91622324 + AT_rich Low_complexity Low_complexity 1 106 0 38 75 0 0 chr2 161634397 161634477 -91622106 + AT_rich Low_complexity Low_complexity 1 80 0 521 144 16 24 chr2 161634759 161634884 -91621699 + GA-rich Low_complexity Low_complexity 1 124 0 317 207 17 0 chr2 161634884 161634942 -91621641 + polypurine Low_complexity Low_complexity 2 60 0 370 298 53 76 chr2 161635372 161635634 -91620949 + L1M4 LINE L1 2903 3158 -2988 1289 293 68 44 chr2 161635693 161636458 -91620125 + L1M4 LINE L1 3239 4033 -2113 1945 143 10 0 chr2 161636458 161636758 -91619825 + AluSx SINE Alu 1 303 -9 1289 293 68 44 chr2 161636758 161636933 -91619650 + L1M4 LINE L1 4033 4202 -1944 364 332 107 8 chr2 161636946 161637310 -91619273 - L1M4c LINE L1 -2867 3515 3116 21 0 0 0 chr2 161637838 161637859 -91618724 + AT_rich Low_complexity Low_complexity 1 21 0 220 282 0 47 chr2 161637998 161638083 -91618500 + (CATATA)n Simple_repeat Simple_repeat 4 84 0 373 236 42 9 chr2 161639566 161639723 -91616860 - L1M4c LINE L1 -4536 1856 1582 7878 203 17 15 chr2 161639741 161642471 -91614112 - L1PA16 LINE L1 -2 6164 3437 217 368 9 0 chr2 161644522 161644628 -91611955 + GA-rich Low_complexity Low_complexity 4 110 0 22 35 0 0 chr2 161645626 161645655 -91610928 + AT_rich Low_complexity Low_complexity 1 29 0 893 248 157 76 chr2 161646292 161646763 -91609820 + LTR33A LTR ERVL 1 509 -14 1448 204 77 52 chr2 161647468 161647909 -91608674 + MER31B LTR ERV1 6 457 -9 396 303 74 34 chr2 161648695 161648870 -91607713 + MIR3 SINE MIR 16 197 -11 232 192 39 13 chr2 161649585 161649663 -91606920 + (TA)n Simple_repeat Simple_repeat 1 80 0 23 78 0 0 chr2 161649761 161649812 -91606771 + AT_rich Low_complexity Low_complexity 1 51 0 1235 88 11 0 chr2 161649853 161650034 -91606549 - L1PA7 LINE L1 0 6154 5972 583 306 85 69 chr2 161651088 161652083 -91604500 - L1M4 LINE L1 -1333 4813 3803 386 350 60 69 chr2 161652626 161653046 -91603537 + L2 LINE L2 2851 3266 -47 22 0 0 0 chr2 161653426 161653448 -91603135 + AT_rich Low_complexity Low_complexity 1 22 0 229 286 0 22 chr2 161653551 161653642 -91602941 + L1MC4 LINE L1 6615 6703 -1339 23 33 0 0 chr2 161654192 161654222 -91602361 + AT_rich Low_complexity Low_complexity 1 30 0 452 208 313 14 chr2 161655100 161655244 -91601339 - MER5A DNA MER1_type -1 188 2 191 244 22 0 chr2 161655635 161655680 -91600903 - MIR SINE MIR -51 211 166 4578 33 0 0 chr2 161655682 161656258 -91600325 - L1PA2 LINE L1 -2717 3429 2854 16567 23 0 0 chr2 161656258 161658972 -91597611 + L1PA2 LINE L1 3438 6151 -4 248 348 43 7 chr2 161658985 161659123 -91597460 - MIR SINE MIR -86 176 34 22 70 0 0 chr2 161659190 161659233 -91597350 + AT_rich Low_complexity Low_complexity 1 43 0 697 324 75 40 chr2 161659243 161659617 -91596966 - MLT1J LTR MaLR 0 511 125 512 300 76 23 chr2 161659757 161660128 -91596455 + MLT1I LTR MaLR 3 409 0 862 280 30 8 chr2 161660493 161660729 -91595854 + MIR SINE MIR 17 257 -5 246 219 82 14 chr2 161661423 161661496 -91595087 - L2 LINE L2 -1589 1725 1648 22 0 0 0 chr2 161661710 161661732 -91594851 + AT_rich Low_complexity Low_complexity 1 22 0 627 106 4 0 chr2 161661759 161661866 -91594717 + L1PA16 LINE L1 2031 2149 -4700 441 171 37 0 chr2 161661868 161661950 -91594633 + L1PB3 LINE L1 5866 5950 -204 9799 240 18 19 chr2 161661950 161664803 -91591780 + L1PA16 LINE L1 2811 5661 -1188 478 212 48 48 chr2 161664869 161665015 -91591568 + L1 LINE L1 4943 5088 -1058 2998 151 26 4 chr2 161665035 161665565 -91591018 + L1PA16 LINE L1 6325 6866 -3 773 289 89 32 chr2 161665618 161666123 -91590460 + L1ME1 LINE L1 527 1060 -5336 * 5427 252 61 22 chr2 161666101 161666644 -91589939 + L1ME1 LINE L1 3096 3616 -2619 3259 135 2 4 chr2 161666644 161667164 -91589419 + L1PA13 LINE L1 5645 6163 0 5427 252 61 22 chr2 161667164 161668351 -91588232 + L1ME1 LINE L1 3616 4755 -1480 988 303 34 65 chr2 161668351 161668886 -91587697 - LTR40a LTR ERVL -1 518 1 5427 252 61 22 chr2 161668886 161670065 -91586518 + L1ME1 LINE L1 4755 6116 -119 245 128 21 0 chr2 161670080 161670127 -91586456 + GA-rich Low_complexity Low_complexity 2 49 0 279 0 0 0 chr2 161671339 161671370 -91585213 + (A)n Simple_repeat Simple_repeat 1 31 0 1728 146 29 0 chr2 161671370 161671690 -91584893 + AluSx SINE Alu 1 328 0 195 346 49 25 chr2 161672118 161672199 -91584384 - MIR SINE MIR -107 101 19 22 0 0 0 chr2 161672364 161672386 -91584197 + AT_rich Low_complexity Low_complexity 1 22 0 216 189 0 0 chr2 161673775 161673812 -91582771 + GA-rich Low_complexity Low_complexity 3 39 0 2159 133 0 0 chr2 161673836 161674144 -91582439 + AluSx SINE Alu 1 308 -4 815 229 35 0 chr2 161674368 161674538 -91582045 - MER45A DNA AcHobo 0 178 3 221 414 61 10 chr2 161674627 161674825 -91581758 - L2 LINE L2 -574 2740 2533 180 0 0 0 chr2 161674869 161674889 -91581694 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 235 306 112 10 chr2 161675021 161675119 -91581464 + L3 LINE CR1 1352 1459 -118 1569 201 166 53 chr2 161675132 161675333 -91581250 - MLT1D LTR MaLR -1 504 327 1067 255 60 58 chr2 161675333 161675870 -91580713 + MER34 LTR ERV1 1 538 -4 1569 201 166 53 chr2 161675870 161675888 -91580695 - MLT1D LTR MaLR -178 327 312 303 28 0 0 chr2 161675888 161675924 -91580659 + (TC)n Simple_repeat Simple_repeat 1 36 0 * 333 47 0 0 chr2 161675923 161675966 -91580617 + (CA)n Simple_repeat Simple_repeat 1 43 0 1569 201 166 53 chr2 161675924 161676198 -91580385 - MLT1D LTR MaLR -193 312 1 466 196 11 0 chr2 161677170 161677262 -91579321 + LTR37A LTR ERV1 112 204 -222 8892 183 48 8 chr2 161677270 161680212 -91576371 + L1MA5A LINE L1 3238 6295 -2 395 256 73 36 chr2 161680239 161680458 -91576125 + LTR37B LTR ERV1 207 433 -35 1838 183 54 11 chr2 161680458 161680774 -91575809 + MLT1A1 LTR MaLR 1 335 -30 1527 160 71 29 chr2 161680774 161681124 -91575459 + MER47A DNA MER2_type 2 366 0 1838 183 54 11 chr2 161681124 161681157 -91575426 + MLT1A1 LTR MaLR 335 365 0 435 318 81 14 chr2 161682329 161682552 -91574031 + L3b LINE CR1 1103 1340 -243 1993 96 3 65 chr2 161682846 161683168 -91573415 - AluSg SINE Alu -8 302 1 2076 125 7 0 chr2 161684607 161684911 -91571672 + AluSp SINE Alu 1 306 -7 2341 199 33 31 chr2 161685429 161686099 -91570484 + LTR27 LTR ERV1 3 728 -141 249 226 97 0 chr2 161686098 161686160 -91570423 + LTR27 LTR ERV1 567 634 -2 * 21 57 0 0 chr2 161686700 161686735 -91569848 + AT_rich Low_complexity Low_complexity 1 35 0 643 162 0 0 chr2 161688036 161688135 -91568448 + AluSg/x SINE Alu 196 294 -15 466 286 143 0 chr2 161688310 161688471 -91568112 + MLT1J2 LTR MaLR 2 185 -265 897 236 19 24 chr2 161688487 161688699 -91567884 + MER58A DNA MER1_type 11 221 -3 1861 162 0 6 chr2 161689165 161689479 -91567104 - AluSx SINE Alu 0 312 1 323 333 0 6 chr2 161690211 161690370 -91566213 + (TA)n Simple_repeat Simple_repeat 1 158 0 317 269 0 43 chr2 161690371 161690464 -91566119 - L1MC4 LINE L1 -1339 6703 6615 312 286 0 22 chr2 161690491 161690582 -91566001 - L1MC4 LINE L1 -1339 6703 6615 2043 108 31 0 chr2 161690698 161690986 -91565597 - AluSg SINE Alu -13 297 1 4887 245 36 42 chr2 161690987 161692852 -91563731 - L1PA12 LINE L1 -2954 4630 2794 2015 286 28 2 chr2 161693103 161693705 -91562878 + L1PA13 LINE L1 1369 1986 -4801 270 296 55 80 chr2 161694471 161694670 -91561913 + LTR67 LTR ERVL 190 383 -174 2864 46 8 0 chr2 161694737 161695110 -91561473 - L1PA2 LINE L1 -787 5359 4984 7184 10 0 0 chr2 161695110 161695923 -91560660 + L1PA2 LINE L1 5343 6155 0 260 233 54 70 chr2 161696166 161696295 -91560288 - L1MC4 LINE L1 -297 5824 5708 2323 143 3 3 chr2 161696639 161697003 -91559580 - THE1B LTR MaLR 0 364 1 874 229 0 0 chr2 161698286 161698461 -91558122 - FRAM SINE Alu -1 175 1 23 33 0 0 chr2 161698464 161698494 -91558089 + AT_rich Low_complexity Low_complexity 1 30 0 22 56 0 0 chr2 161698954 161698990 -91557593 + AT_rich Low_complexity Low_complexity 1 36 0 1957 146 140 8 chr2 161699446 161699824 -91556759 - MSTA LTR MaLR 0 428 1 985 226 67 4 chr2 161699958 161700197 -91556386 - MER58B DNA MER1_type -1 340 87 535 252 0 0 chr2 161700197 161700312 -91556271 - FLAM_A SINE Alu -18 124 10 303 300 0 11 chr2 161700333 161700423 -91556160 - MER58B DNA MER1_type -252 89 1 2115 133 0 0 chr2 161700776 161701077 -91555506 - AluSx SINE Alu -9 303 3 330 232 152 0 chr2 161701425 161701524 -91555059 - L2 LINE L2 -1872 1442 1329 197 214 0 83 chr2 161701910 161701994 -91554589 + L2 LINE L2 1588 1664 -1650 418 203 17 0 chr2 161702451 161702569 -91554014 + GA-rich Low_complexity Low_complexity 4 123 0 280 343 50 0 chr2 161703476 161703575 -91553008 + MIR SINE MIR 7 110 -152 623 159 15 61 chr2 161703575 161703707 -91552876 - LTR52 LTR ERVL -293 128 3 1363 231 7 7 chr2 161704266 161704552 -91552031 + AluJo SINE Alu 3 288 -24 195 42 0 0 chr2 161706118 161706142 -91550441 + (A)n Simple_repeat Simple_repeat 1 24 0 186 267 23 105 chr2 161706677 161706763 -91549820 - MIR SINE MIR -78 130 52 442 292 16 70 chr2 161711069 161711254 -91545329 - MIR3 SINE MIR -2 206 32 234 271 0 0 chr2 161711982 161712122 -91544461 + CT-rich Low_complexity Low_complexity 1 140 0 21 0 0 0 chr2 161712644 161712665 -91543918 + AT_rich Low_complexity Low_complexity 1 21 0 246 188 0 0 chr2 161712757 161712805 -91543778 - MIR SINE MIR -92 116 69 21 0 0 0 chr2 161712969 161712990 -91543593 + AT_rich Low_complexity Low_complexity 1 21 0 29 47 0 0 chr2 161713085 161713128 -91543455 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr2 161713154 161713175 -91543408 + AT_rich Low_complexity Low_complexity 1 21 0 674 229 80 11 chr2 161714820 161715008 -91541575 + MIR SINE MIR 6 206 -56 19040 45 4 2 chr2 161715827 161718993 -91537590 - L1PA5 LINE L1 0 6154 2983 1206 143 5 13 chr2 161720060 161720284 -91536299 - L1 LINE L1 -945 5201 4980 290 203 29 0 chr2 161720285 161720354 -91536229 + L1 LINE L1 5203 5273 -873 848 195 0 0 chr2 161720400 161720554 -91536029 - L1MB1 LINE L1 -51 6117 5964 * 3435 182 29 2 chr2 161720552 161721363 -91535220 + L1PA15 LINE L1 5302 6174 0 1927 65 8 4 chr2 161722739 161723000 -91533583 - L1PA6 LINE L1 -6 6148 5887 42166 38 25 1 chr2 161723130 161728908 -91527675 + L1PA3 LINE L1 1 5915 -240 239 164 36 0 chr2 161729009 161729064 -91527519 + (CATATA)n Simple_repeat Simple_repeat 2 58 0 237 268 21 0 chr2 161729065 161729162 -91527421 - L1MC4 LINE L1 -1339 6703 6605 2289 126 56 0 chr2 161729518 161729874 -91526709 - MER51B LTR ERV1 0 377 2 8197 146 74 57 chr2 161729880 161731813 -91524770 - MER51B-int LTR ERV1 -3 7813 5620 513 121 110 0 chr2 161731803 161731894 -91524689 - MER51B-int LTR ERV1 -2188 5349 5249 * 1593 122 27 19 chr2 161731893 161732314 -91524269 - MER51B-int LTR ERV1 -1878 4967 2210 * 1864 154 50 15 chr2 161732299 161732314 -91524269 - MER51B-int LTR ERV1 -2775 3171 3158 219 36 0 0 chr2 161732314 161732342 -91524241 + (CAA)n Simple_repeat Simple_repeat 2 29 0 1864 154 50 15 chr2 161732342 161732803 -91523780 - MER51B-int LTR ERV1 -2788 3158 1474 * 7926 103 105 6 chr2 161732787 161734159 -91522424 - LTR10B-int LTR ERV1 -4501 3315 1804 2020 115 19 29 chr2 161734159 161734471 -91522112 - AluSx SINE Alu -3 309 1 584 170 38 119 chr2 161734483 161734642 -91521941 - MER4A LTR ERV1 -147 517 372 4768 131 20 10 chr2 161734748 161736029 -91520554 - LTR10B-int LTR ERV1 -6321 1495 114 3273 119 22 6 chr2 161736029 161736526 -91520057 - LTR10B LTR ERV1 0 505 1 4768 131 20 10 chr2 161736526 161736642 -91519941 - LTR10B-int LTR ERV1 -7702 114 1 2133 133 71 0 chr2 161736642 161736994 -91519589 - MER51B LTR ERV1 0 377 1 496 287 166 17 chr2 161737207 161737496 -91519087 - HAL1 LINE L1 -692 1815 1484 243 0 0 0 chr2 161737540 161737567 -91519016 + (TC)n Simple_repeat Simple_repeat 2 28 0 286 209 86 103 chr2 161737658 161737892 -91518691 - L1MC5 LINE L1 -36 7925 7696 348 274 19 28 chr2 161737972 161738078 -91518505 - MLT1J LTR MaLR -57 454 350 29 0 0 0 chr2 161738566 161738595 -91517988 + AT_rich Low_complexity Low_complexity 1 29 0 2520 139 11 39 chr2 161738596 161739036 -91517547 - MSTC LTR MaLR 0 428 1 1510 216 0 0 chr2 161741228 161741520 -91515063 + AluJo SINE Alu 1 292 -20 212 163 0 0 chr2 161741522 161741565 -91515018 + (TA)n Simple_repeat Simple_repeat 1 43 0 217 246 33 0 chr2 161741759 161741820 -91514763 + GA-rich Low_complexity Low_complexity 3 65 0 246 81 0 0 chr2 161742710 161742747 -91513836 + (CA)n Simple_repeat Simple_repeat 2 38 0 1256 273 110 29 chr2 161743081 161743528 -91513055 + MER77 LTR ERV1 119 601 -4 2107 102 3 7 chr2 161743713 161744008 -91512575 - AluSg SINE Alu -14 296 3 30 59 0 0 chr2 161744592 161744643 -91511940 + AT_rich Low_complexity Low_complexity 1 51 0 32 0 0 0 chr2 161744859 161744891 -91511692 + AT_rich Low_complexity Low_complexity 1 32 0 322 271 152 20 chr2 161745087 161745238 -91511345 - MLT1I LTR MaLR -11 398 228 342 326 68 30 chr2 161746060 161746192 -91510391 + L2 LINE L2 3134 3270 -2 21 57 0 0 chr2 161747116 161747151 -91509432 + AT_rich Low_complexity Low_complexity 1 35 0 903 104 0 7 chr2 161748062 161748206 -91508377 + L1MA5 LINE L1 6158 6300 0 213 308 0 0 chr2 161748384 161748436 -91508147 + L2 LINE L2 3210 3261 -11 283 241 184 0 chr2 161748450 161748537 -91508046 + L3 LINE CR1 1044 1146 -431 679 218 0 0 chr2 161749685 161749809 -91506774 - FLAM_A SINE Alu -11 131 8 25 51 0 0 chr2 161749998 161750037 -91506546 + AT_rich Low_complexity Low_complexity 1 39 0 524 295 75 43 chr2 161750615 161750920 -91505663 + ERVL LTR ERVL 1988 2302 -3462 326 301 37 42 chr2 161750958 161751174 -91505409 + ERVL LTR ERVL 2667 2881 -2883 244 332 161 47 chr2 161751939 161752472 -91504111 + L2 LINE L2 2638 3221 -92 371 222 86 34 chr2 161752563 161752702 -91503881 + MIR SINE MIR 70 218 -44 1096 300 140 17 chr2 161752775 161753599 -91502984 - L2 LINE L2 -2 3311 2378 183 391 0 0 chr2 161756297 161756384 -91500199 - MER5B DNA MER1_type -46 132 46 495 337 44 20 chr2 161758347 161758599 -91497984 + MIR SINE MIR 5 262 0 292 269 25 0 chr2 161759712 161759831 -91496752 + (TA)n Simple_repeat Simple_repeat 2 123 0 248 279 39 19 chr2 161760175 161760279 -91496304 - MIR SINE MIR -98 164 59 21 36 0 0 chr2 161760889 161760917 -91495666 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr2 161760975 161761006 -91495577 + AT_rich Low_complexity Low_complexity 1 31 0 262 380 42 48 chr2 161764255 161764421 -91492162 + MIR3 SINE MIR 19 183 -25 24 85 0 0 chr2 161765583 161765642 -91490941 + AT_rich Low_complexity Low_complexity 1 59 0 21 36 0 0 chr2 161765792 161765820 -91490763 + AT_rich Low_complexity Low_complexity 1 28 0 25 51 0 0 chr2 161766915 161766954 -91489629 + AT_rich Low_complexity Low_complexity 1 39 0 246 136 0 0 chr2 161768336 161768380 -91488203 + (T)n Simple_repeat Simple_repeat 1 44 0 361 215 75 0 chr2 161769057 161769150 -91487433 - L1MC3 LINE L1 -6 7779 7680 26 74 0 0 chr2 161770099 161770153 -91486430 + AT_rich Low_complexity Low_complexity 1 54 0 405 0 0 0 chr2 161770876 161770921 -91485662 + (CA)n Simple_repeat Simple_repeat 2 46 0 26 0 0 0 chr2 161771052 161771078 -91485505 + AT_rich Low_complexity Low_complexity 1 26 0 392 244 46 46 chr2 161771754 161771885 -91484698 - MER91B DNA MER1_type -29 161 31 220 150 67 0 chr2 161773580 161773640 -91482943 + (TA)n Simple_repeat Simple_repeat 2 65 0 21 0 0 0 chr2 161774919 161774940 -91481643 + AT_rich Low_complexity Low_complexity 1 21 0 368 288 28 75 chr2 161775506 161775682 -91480901 - L1ME2 LINE L1 -298 5866 5700 1960 154 3 10 chr2 161775682 161775994 -91480589 - AluSx SINE Alu -2 310 1 368 288 28 75 chr2 161775994 161776029 -91480554 - L1ME2 LINE L1 -464 5700 5665 2226 165 27 22 chr2 161776046 161776447 -91480136 + MER50 LTR ERV1 1 403 -331 291 91 23 0 chr2 161776820 161776864 -91479719 + MER50 LTR ERV1 665 709 -25 3968 164 29 7 chr2 161776918 161777614 -91478969 - MER50 LTR ERV1 -23 711 1 414 302 64 87 chr2 161777625 161777983 -91478600 - L1ME2 LINE L1 -555 5607 5258 327 293 44 84 chr2 161778145 161778394 -91478189 - L1ME2 LINE L1 -3433 2713 2475 433 329 68 60 chr2 161778458 161779057 -91477526 + L1M4 LINE L1 4617 5220 -926 765 303 71 58 chr2 161779892 161780448 -91476135 + L1MEc LINE L1 282 858 -5705 2232 31 4 0 chr2 161780448 161780708 -91475875 + AluY SINE Alu 36 296 -15 765 303 71 58 chr2 161780708 161781161 -91475422 + L1MEc LINE L1 858 1304 -5259 237 281 128 52 chr2 161781273 161781522 -91475061 + L1MEc LINE L1 1409 1676 -4706 4962 181 64 48 chr2 161781581 161782777 -91473806 + L1MEc LINE L1 3 1218 -5166 676 151 0 8 chr2 161782776 161782941 -91473642 + L1MEc LINE L1 1856 2134 -4250 * 536 153 0 64 chr2 161782939 161783108 -91473475 + L1MEc LINE L1 2398 2575 -3826 * 567 276 50 15 chr2 161783168 161783367 -91473216 + L1M2 LINE L1 2 207 -6642 271 362 7 0 chr2 161784348 161784500 -91472083 + L1PA15-16 LINE L1 1396 1548 -5301 332 284 0 0 chr2 161784515 161784603 -91471980 + L1PA15-16 LINE L1 1472 1559 -5290 * 4477 244 42 14 chr2 161784593 161786212 -91470371 + L1PA15-16 LINE L1 1336 3096 -3753 6106 184 66 47 chr2 161786213 161787671 -91468912 - L1MCa LINE L1 -4907 1519 34 271 263 90 23 chr2 161787716 161787849 -91468734 + L1MEc LINE L1 1866 2007 -4389 249 281 143 19 chr2 161787870 161788080 -91468503 + L1MEc LINE L1 2078 2313 -4083 1627 192 21 26 chr2 161788142 161788481 -91468102 - MER44D DNA MER2_type 0 609 3 829 283 50 22 chr2 161788484 161788947 -91467636 + L1MEc LINE L1 2352 2827 -3388 1829 129 54 4 chr2 161788951 161789229 -91467354 + L1P3 LINE L1 6 297 -6164 2358 167 24 4 chr2 161789638 161790088 -91466495 - L1MA8 LINE L1 -71 6220 5762 812 179 0 0 chr2 161790103 161790243 -91466340 + L1MA8 LINE L1 5601 5740 -560 * 2082 205 124 0 chr2 161790242 161790784 -91465799 - L1MA8 LINE L1 -1206 4940 4332 234 239 15 15 chr2 161791186 161791253 -91465330 + AluS SINE Alu 227 293 -9 2174 168 48 60 chr2 161791263 161791764 -91464819 + L1MC1 LINE L1 5839 6333 0 710 297 103 15 chr2 161791779 161792132 -91464451 + L2 LINE L2 2720 3110 -162 200 357 0 29 chr2 161792151 161792221 -91464362 - L2 LINE L2 -370 2944 2877 235 248 38 29 chr2 161792237 161792342 -91464241 + HAL1b LINE L1 1235 1340 -8 21 36 0 0 chr2 161793055 161793083 -91463500 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr2 161793489 161793525 -91463058 + AT_rich Low_complexity Low_complexity 1 36 0 1537 192 50 52 chr2 161794099 161794463 -91462120 + MLT1A2 LTR MaLR 1 363 -11 757 329 126 26 chr2 161794482 161794883 -91461700 - L2 LINE L2 -154 3159 2677 1950 152 0 0 chr2 161794883 161795192 -91461391 - AluSg SINE Alu -1 309 1 757 329 126 26 chr2 161795192 161795375 -91461208 - L2 LINE L2 -636 2677 2514 332 251 68 47 chr2 161795527 161795718 -91460865 + L2 LINE L2 3009 3203 -110 185 320 0 0 chr2 161796163 161796213 -91460370 - L2 LINE L2 -80 3233 3184 484 233 110 0 chr2 161796225 161796388 -91460195 - L1MCc LINE L1 -1572 5369 5189 5451 116 0 0 chr2 161796390 161797382 -91459201 - L1PA13 LINE L1 -4 6159 5175 9463 178 19 10 chr2 161797391 161799206 -91457377 - L1PA13 LINE L1 -1032 5114 3284 1534 254 27 66 chr2 161799187 161799965 -91456618 - L1MCc LINE L1 -2366 4575 3828 * 234 205 54 18 chr2 161799995 161800107 -91456476 + (TA)n Simple_repeat Simple_repeat 1 116 0 1818 281 90 29 chr2 161800137 161801573 -91455010 - L1MCc LINE L1 -3143 3798 2305 966 314 80 20 chr2 161802048 161802840 -91453743 - L1MCc LINE L1 -4892 1531 971 332 231 102 114 chr2 161803135 161803399 -91453184 - L1MDa LINE L1 -4726 1814 1554 278 224 82 10 chr2 161803740 161803838 -91452745 + HsTC2 DNA Tc2 3 107 -1791 233 65 0 0 chr2 161804026 161804057 -91452526 - THE1-int LTR MaLR -1228 352 322 24 0 0 0 chr2 161804214 161804238 -91452345 + AT_rich Low_complexity Low_complexity 1 24 0 708 325 75 17 chr2 161804398 161804746 -91451837 + MLT1J LTR MaLR 39 406 -105 281 261 14 94 chr2 161804827 161804858 -91451725 + MIR SINE MIR 128 160 -102 2502 117 3 8 chr2 161804858 161805233 -91451350 + THE1C LTR MaLR 1 373 -2 9035 115 50 46 chr2 161805235 161805643 -91450940 + THE1C-int LTR MaLR 1 406 -1174 2065 90 0 8 chr2 161805643 161805911 -91450672 - AluY SINE Alu -45 266 1 9035 115 50 46 chr2 161805911 161807075 -91449508 + THE1C-int LTR MaLR 406 1580 0 2498 110 8 29 chr2 161807075 161807458 -91449125 + THE1C LTR MaLR 1 375 0 281 261 14 94 chr2 161807458 161807560 -91449023 + MIR SINE MIR 159 254 -8 32 0 0 0 chr2 161809746 161809778 -91446805 + AT_rich Low_complexity Low_complexity 1 32 0 200 213 16 0 chr2 161810161 161810222 -91446361 + CT-rich Low_complexity Low_complexity 4 65 0 22 70 0 0 chr2 161810748 161810791 -91445792 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr2 161812930 161812951 -91443632 + AT_rich Low_complexity Low_complexity 1 21 0 471 297 37 81 chr2 161814200 161814496 -91442087 - MLT1J LTR MaLR -228 283 1 609 137 10 0 chr2 161815436 161815538 -91441045 - L1MC1 LINE L1 -386 5947 5845 2110 70 17 10 chr2 161815540 161815842 -91440741 - AluY SINE Alu -3 308 5 269 332 10 91 chr2 161816187 161816251 -91440332 - L1MC1 LINE L1 -2167 5641 5573 2076 92 7 20 chr2 161816251 161816555 -91440028 + AluSq SINE Alu 3 302 -11 269 332 10 91 chr2 161816555 161816698 -91439885 - L1MC1 LINE L1 -2235 5573 5451 219 204 21 54 chr2 161816794 161816887 -91439696 + (TAAA)n Simple_repeat Simple_repeat 2 91 0 181 210 32 0 chr2 161816900 161816962 -91439621 + (TATATG)n Simple_repeat Simple_repeat 2 65 0 437 297 100 23 chr2 161817012 161817322 -91439261 - L1MC1 LINE L1 -1662 4484 4151 353 341 36 23 chr2 161817550 161817770 -91438813 - L1MC1 LINE L1 -2196 3950 3728 255 280 145 68 chr2 161817799 161818006 -91438577 + MIR SINE MIR 29 251 -11 22 0 0 0 chr2 161818093 161818115 -91438468 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr2 161818290 161818316 -91438267 + AT_rich Low_complexity Low_complexity 1 26 0 23 33 0 0 chr2 161818496 161818526 -91438057 + AT_rich Low_complexity Low_complexity 1 30 0 514 325 60 38 chr2 161819013 161819330 -91437253 - LTR16A LTR ERVL -8 442 119 24 53 0 0 chr2 161819426 161819464 -91437119 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr2 161819659 161819681 -91436902 + AT_rich Low_complexity Low_complexity 1 22 0 318 367 143 26 chr2 161820023 161820901 -91435682 - L2 LINE L2 -940 2374 1394 7106 50 16 6 chr2 161820903 161821974 -91434609 - L1PA5 LINE L1 -2 6152 5078 25505 50 9 3 chr2 161822075 161824614 -91431969 - L1P LINE L1 -754 5392 2828 2280 105 0 0 chr2 161824614 161824920 -91431663 - AluY SINE Alu -5 306 1 25505 50 9 3 chr2 161824920 161825680 -91430903 - L1P LINE L1 -3318 2828 2074 345 67 0 0 chr2 161825681 161825726 -91430857 - L1P LINE L1 -4030 2116 2072 282 54 0 0 chr2 161825722 161825759 -91430824 + L1P LINE L1 2033 2069 -4077 * 231 313 25 49 chr2 161825797 161825960 -91430623 - L2 LINE L2 -1966 1348 1190 1795 191 73 0 chr2 161826073 161826413 -91430170 + MLT1A1 LTR MaLR 1 365 0 1376 180 35 54 chr2 161826515 161826863 -91429720 - AluJb SINE Alu 0 342 1 469 270 106 4 chr2 161827041 161827278 -91429305 - L1MC1 LINE L1 -3129 3017 2757 2191 91 7 3 chr2 161827288 161827586 -91428997 + AluY SINE Alu 1 299 -12 1046 90 35 0 chr2 161827586 161827759 -91428824 + AluY SINE Alu 133 310 0 640 237 154 4 chr2 161827764 161828017 -91428566 - L1MC1 LINE L1 -3400 2746 2456 245 155 17 0 chr2 161828032 161828090 -91428493 + (TTA)n Simple_repeat Simple_repeat 1 59 0 615 250 45 0 chr2 161828952 161829128 -91427455 - L1ME3A LINE L1 -30 6140 5957 435 153 10 31 chr2 161829447 161829545 -91427038 - L1MA5 LINE L1 -3 6297 6202 3246 154 42 43 chr2 161829545 161830203 -91426380 + L1MA5 LINE L1 5516 6174 -126 22 70 0 0 chr2 161830307 161830350 -91426233 + AT_rich Low_complexity Low_complexity 1 43 0 25 31 0 0 chr2 161830853 161830885 -91425698 + AT_rich Low_complexity Low_complexity 1 32 0 370 310 60 38 chr2 161830885 161831069 -91425514 - MIR SINE MIR -41 221 34 203 218 36 0 chr2 161831594 161831649 -91424934 + (CATATA)n Simple_repeat Simple_repeat 6 62 0 58 0 0 0 chr2 161831925 161831983 -91424600 + AT_rich Low_complexity Low_complexity 1 58 0 7243 151 28 3 chr2 161831988 161834348 -91422235 - L1MA3 LINE L1 -1 6304 3883 2355 121 3 0 chr2 161834385 161834740 -91421843 - L1PB2 LINE L1 -3 6148 5793 285 75 0 0 chr2 161834740 161834780 -91421803 + (TG)n Simple_repeat Simple_repeat 2 11 -30 4903 281 34 69 chr2 161834786 161837477 -91419106 + L1PA12 LINE L1 33 3202 -4382 682 123 0 74 chr2 161837477 161837599 -91418984 + AluJb SINE Alu 38 150 -162 4903 281 34 69 chr2 161837599 161838846 -91417737 + L1PA12 LINE L1 3202 4491 -3093 542 171 91 48 chr2 161838816 161839003 -91417580 + L1 LINE L1 5689 5883 -1701 * 358 198 16 8 chr2 161838976 161839097 -91417486 + L1 LINE L1 4499 4620 -2964 * 340 327 73 64 chr2 161839475 161839805 -91416778 - ERVL LTR ERVL -833 4931 4599 571 333 66 25 chr2 161839897 161840140 -91416443 - ERVL LTR ERVL -1130 4355 4103 234 128 0 0 chr2 161841733 161841772 -91414811 + (CA)n Simple_repeat Simple_repeat 2 40 0 210 118 0 0 chr2 161841823 161841857 -91414726 + (GA)n Simple_repeat Simple_repeat 1 34 0 27 29 0 0 chr2 161842399 161842433 -91414150 + AT_rich Low_complexity Low_complexity 1 34 0 26 0 0 0 chr2 161842517 161842543 -91414040 + AT_rich Low_complexity Low_complexity 1 26 0 4345 249 88 34 chr2 161843261 161844793 -91411790 + L1MEc LINE L1 8 1621 -4921 266 298 50 8 chr2 161844824 161844945 -91411638 + L1MB7 LINE L1 2716 2841 -3803 2876 264 56 29 chr2 161844951 161846820 -91409763 + L1MEc LINE L1 1774 3666 -2978 6132 238 50 16 chr2 161846858 161847769 -91408814 + L1MB7 LINE L1 3779 4657 -2025 204 40 0 0 chr2 161847769 161847794 -91408789 + (CA)n Simple_repeat Simple_repeat 2 26 0 6132 238 50 16 chr2 161847794 161848131 -91408452 + L1MB7 LINE L1 4657 4981 -1701 2220 90 0 7 chr2 161848131 161848431 -91408152 - AluY SINE Alu -13 298 1 6132 238 50 16 chr2 161848431 161849667 -91406916 + L1MB7 LINE L1 4981 6381 -301 2033 100 7 4 chr2 161849667 161849968 -91406615 + AluSp SINE Alu 6 307 0 6132 238 50 16 chr2 161849968 161850262 -91406321 + L1MB7 LINE L1 6381 6663 -19 3532 207 94 130 chr2 161850884 161852705 -91403878 - MER52A LTR ERV1 0 1755 1 579 188 29 58 chr2 161852955 161853093 -91403490 - LTR53 LTR ERVL -3 516 383 4331 250 88 34 chr2 161854236 161855768 -91400815 + L1M4c LINE L1 8 1621 -4921 266 298 50 8 chr2 161855799 161855920 -91400663 + L1M4 LINE L1 2716 2841 -3803 * 1460 268 53 2 chr2 161855917 161856388 -91400195 + L1M4c LINE L1 1617 2111 -4535 2748 259 54 34 chr2 161856472 161857794 -91398789 + L1M4c LINE L1 2351 3666 -2978 3481 262 75 8 chr2 161857832 161858743 -91397840 + L1M4c LINE L1 3779 4798 -1846 204 40 0 0 chr2 161858743 161858768 -91397815 + (CA)n Simple_repeat Simple_repeat 2 26 0 3481 262 75 8 chr2 161858768 161859102 -91397481 + L1M4c LINE L1 4798 5108 -1536 2015 90 0 62 chr2 161859105 161859426 -91397157 - AluY SINE Alu -10 301 1 1834 60 140 4 chr2 161863202 161863467 -91393116 - AluY SINE Alu 0 301 1 193 352 37 19 chr2 161864358 161864466 -91392117 + L2 LINE L2 2926 3035 -237 406 355 65 14 chr2 161864618 161864832 -91391751 + MIR SINE MIR 37 261 -1 238 294 29 52 chr2 161865164 161865300 -91391283 + MIR SINE MIR 59 191 -71 27 0 0 0 chr2 161866029 161866056 -91390527 + AT_rich Low_complexity Low_complexity 1 27 0 2421 69 0 0 chr2 161866960 161867266 -91389317 + AluY SINE Alu 1 306 -5 1754 135 0 47 chr2 161867379 161867487 -91389096 - L1PB3 LINE L1 -86 6068 5956 1882 134 0 64 chr2 161867487 161867801 -91388782 - AluSx SINE Alu -18 294 1 1754 135 0 47 chr2 161867801 161867844 -91388739 - L1PB3 LINE L1 -198 5956 5604 5259 179 23 32 chr2 161867844 161869697 -91386886 - L1MA9 LINE L1 -363 5791 4131 250 298 48 0 chr2 161870478 161870562 -91386021 + L2 LINE L2 3226 3313 0 282 253 11 23 chr2 161870950 161871037 -91385546 + (TATATG)n Simple_repeat Simple_repeat 4 89 0 228 135 0 0 chr2 161871041 161871078 -91385505 + (CA)n Simple_repeat Simple_repeat 2 38 0 230 240 146 29 chr2 161871166 161871337 -91385246 + L1ME4a LINE L1 5926 6116 -5 1852 89 7 29 chr2 161871763 161872044 -91384539 + AluY SINE Alu 1 275 -36 1824 75 0 56 chr2 161872396 161872662 -91383921 + AluY SINE Alu 46 296 -15 1845 229 28 52 chr2 161872933 161873466 -91383117 - MLT2B1 LTR ERVL 0 520 1 258 287 75 0 chr2 161873583 161873677 -91382906 - L2 LINE L2 -4 3268 3168 226 360 151 40 chr2 161873749 161874327 -91382256 - L2 LINE L2 -371 2943 2302 562 209 159 25 chr2 161874962 161875163 -91381420 + L1ME4a LINE L1 5894 6121 0 205 273 91 38 chr2 161876483 161876615 -91379968 - MIR SINE MIR -51 211 73 36 70 0 0 chr2 161876977 161877048 -91379535 + AT_rich Low_complexity Low_complexity 1 71 0 280 300 123 59 chr2 161877058 161877278 -91379305 - L2 LINE L2 -60 3253 3020 302 295 50 50 chr2 161878051 161878190 -91378393 + L3 LINE CR1 1350 1488 -89 291 322 70 28 chr2 161878528 161878671 -91377912 + MIR3 SINE MIR 21 169 -39 2043 116 7 0 chr2 161878731 161879016 -91377567 + AluSx SINE Alu 1 287 -25 212 0 36 0 chr2 161879032 161879060 -91377523 + (GAA)n Simple_repeat Simple_repeat 2 30 0 548 293 88 8 chr2 161879146 161879385 -91377198 + MIR SINE MIR 2 259 -3 21 36 0 0 chr2 161880824 161880852 -91375731 + AT_rich Low_complexity Low_complexity 1 28 0 486 285 87 17 chr2 161882333 161882505 -91374078 + MIR SINE MIR 10 193 -69 2183 120 7 0 chr2 161883373 161883682 -91372901 + AluSx SINE Alu 1 311 -1 22 0 0 0 chr2 161884248 161884270 -91372313 + AT_rich Low_complexity Low_complexity 1 22 0 255 350 10 0 chr2 161884318 161884421 -91372162 - L1ME LINE L1 -530 5591 5488 180 94 0 31 chr2 161884970 161885002 -91371581 + MIR SINE MIR 132 162 -100 21 71 0 0 chr2 161885312 161885354 -91371229 + AT_rich Low_complexity Low_complexity 1 42 0 26 104 0 0 chr2 161885395 161885491 -91371092 + AT_rich Low_complexity Low_complexity 1 96 0 24 0 0 0 chr2 161885585 161885609 -91370974 + AT_rich Low_complexity Low_complexity 1 24 0 420 349 7 13 chr2 161885727 161885879 -91370704 + MLT1H LTR MaLR 136 286 -263 199 384 103 29 chr2 161886478 161886856 -91369727 - L2 LINE L2 -724 2590 2185 180 0 0 0 chr2 161886976 161886996 -91369587 + (A)n Simple_repeat Simple_repeat 1 20 0 302 283 200 0 chr2 161887673 161887793 -91368790 + MER20B DNA MER1_type 1 144 -639 5377 189 120 79 chr2 161887856 161888933 -91367650 + L1MC3 LINE L1 5996 7257 -528 321 289 0 0 chr2 161888933 161889023 -91367560 + MLT1F1 LTR MaLR 36 125 -442 5377 189 120 79 chr2 161889023 161889567 -91367016 + L1MC3 LINE L1 7257 7777 -8 1008 255 75 5 chr2 161889578 161889950 -91366633 + MER20B DNA MER1_type 238 635 -148 22 35 0 0 chr2 161890232 161890261 -91366322 + AT_rich Low_complexity Low_complexity 1 29 0 203 260 234 58 chr2 161890512 161890666 -91365917 - MER5A DNA MER1_type 0 189 9 603 320 38 60 chr2 161891380 161891749 -91364834 + L2 LINE L2 2953 3313 0 25 51 0 0 chr2 161892455 161892494 -91364089 + AT_rich Low_complexity Low_complexity 1 39 0 1001 249 61 40 chr2 161894104 161894595 -91361988 - MLT1H LTR MaLR 0 549 4 450 176 11 53 chr2 161897242 161897429 -91359154 + (TA)n Simple_repeat Simple_repeat 2 180 0 30 0 0 0 chr2 161897633 161897663 -91358920 + AT_rich Low_complexity Low_complexity 1 30 0 644 307 71 50 chr2 161899529 161899928 -91356655 + LTR16A LTR ERVL 31 457 0 246 262 116 0 chr2 161900064 161900179 -91356404 - L1MC/D LINE L1 -456 5665 5555 281 252 81 8 chr2 161900189 161900312 -91356271 - L1MC/D LINE L1 -2324 5484 5353 473 269 224 40 chr2 161900666 161901216 -91355367 - L1MC/D LINE L1 -2376 3770 3120 2567 7 0 0 chr2 161902617 161902898 -91353685 - AluYb8 SINE Alu 0 318 38 201 94 0 0 chr2 161903079 161903111 -91353472 + (T)n Simple_repeat Simple_repeat 1 32 0 193 269 104 104 chr2 161903368 161903502 -91353081 + MIR3 SINE MIR 2 135 -73 237 196 0 36 chr2 161903508 161903564 -91353019 + L2 LINE L2 3190 3243 -70 26 30 0 0 chr2 161904193 161904226 -91352357 + AT_rich Low_complexity Low_complexity 1 33 0 271 155 62 10 chr2 161904434 161904518 -91352065 + (TA)n Simple_repeat Simple_repeat 2 93 -10 1905 133 0 7 chr2 161904518 161904796 -91351787 - AluSq SINE Alu -37 276 1 271 155 62 10 chr2 161904796 161904808 -91351775 + (TA)n Simple_repeat Simple_repeat 93 103 0 219 262 19 112 chr2 161905480 161905587 -91350996 + L2 LINE L2 3217 3313 0 1078 90 0 0 chr2 161905787 161905931 -91350652 - AluSg/x SINE Alu 0 309 166 453 326 104 5 chr2 161906666 161906887 -91349696 + MIR SINE MIR 17 259 -3 224 250 0 0 chr2 161907090 161907138 -91349445 - L2 LINE L2 -17 3296 3249 284 333 58 43 chr2 161907250 161907457 -91349126 + L2 LINE L2 2666 2875 -439 251 319 53 53 chr2 161907511 161907699 -91348884 + L2 LINE L2 2959 3146 -167 22 0 0 0 chr2 161907706 161907728 -91348855 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr2 161908690 161908713 -91347870 + AT_rich Low_complexity Low_complexity 1 23 0 183 80 0 0 chr2 161908903 161908928 -91347655 + (GA)n Simple_repeat Simple_repeat 1 25 0 321 68 0 0 chr2 161911071 161911115 -91345468 + (CA)n Simple_repeat Simple_repeat 2 45 0 30 27 0 0 chr2 161912324 161912361 -91344222 + AT_rich Low_complexity Low_complexity 1 37 0 285 232 74 11 chr2 161912745 161912840 -91343743 + MIR SINE MIR 87 187 -75 538 239 19 52 chr2 161913712 161913867 -91342716 - L2 LINE L2 0 3313 3164 452 246 67 15 chr2 161913875 161914009 -91342574 - MIR SINE MIR -86 176 36 484 252 7 0 chr2 161915927 161916078 -91340505 + GA-rich Low_complexity Low_complexity 1 152 0 1476 148 16 12 chr2 161916088 161916344 -91340239 - MLT2C1 LTR ERVL -131 266 10 404 318 42 115 chr2 161916400 161916686 -91339897 - L2 LINE L2 -4 3268 3004 252 241 110 83 chr2 161916723 161916868 -91339715 - L2 LINE L2 -38 3275 3127 21 36 0 0 chr2 161917036 161917064 -91339519 + AT_rich Low_complexity Low_complexity 1 28 0 30 27 0 0 chr2 161917098 161917135 -91339448 + AT_rich Low_complexity Low_complexity 1 37 0 1406 212 94 44 chr2 161917347 161917828 -91338755 + MLT1D LTR MaLR 1 505 0 386 316 38 19 chr2 161918798 161918956 -91337627 - MIR3 SINE MIR -3 205 45 2666 17 0 0 chr2 161918957 161919257 -91337326 + AluYa5 SINE Alu 1 300 -11 3822 145 22 28 chr2 161919514 161920224 -91336359 + L1MA8 LINE L1 5586 6291 0 27 0 0 0 chr2 161920266 161920293 -91336290 + AT_rich Low_complexity Low_complexity 1 27 0 207 244 51 64 chr2 161920521 161920599 -91335984 + MIR SINE MIR 111 187 -75 252 0 0 0 chr2 161920644 161920672 -91335911 + (TG)n Simple_repeat Simple_repeat 2 29 0 491 295 104 6 chr2 161921091 161921264 -91335319 + MIR3 SINE MIR 19 208 0 449 34 17 0 chr2 161921456 161921515 -91335068 + (TAGA)n Simple_repeat Simple_repeat 3 62 0 282 208 100 42 chr2 161922039 161922159 -91334424 - MIR SINE MIR -8 254 128 951 162 0 46 chr2 161922178 161922375 -91334208 - L1PA11 LINE L1 0 6174 5987 21 36 0 0 chr2 161924690 161924718 -91331865 + AT_rich Low_complexity Low_complexity 1 28 0 454 264 155 19 chr2 161924822 161924977 -91331606 + MER5A DNA MER1_type 9 184 -5 356 346 79 38 chr2 161927081 161927195 -91329388 + L3 LINE CR1 1046 1154 -423 1850 10 0 0 chr2 161927195 161927399 -91329184 + AluYb8 SINE Alu 110 313 -5 356 346 79 38 chr2 161927399 161927576 -91329007 + L3 LINE CR1 1154 1349 -228 344 105 0 0 chr2 161928175 161928232 -91328351 - L1MA8 LINE L1 -1 6290 6234 8033 174 41 30 chr2 161928232 161928517 -91328066 - L1M2 LINE L1 -658 5633 5353 1839 122 7 4 chr2 161928517 161928787 -91327796 + AluSq SINE Alu 11 281 -32 818 62 9 0 chr2 161928788 161928901 -91327682 + (GAAA)n Simple_repeat Simple_repeat 2 115 0 8033 174 41 30 chr2 161928901 161930628 -91325955 - L1M2 LINE L1 -937 5354 3584 2939 195 32 7 chr2 161930635 161930982 -91325601 + L1MC1 LINE L1 4978 5315 -1018 2003 110 0 0 chr2 161930982 161931255 -91325328 + AluSg SINE Alu 38 310 0 2939 195 32 7 chr2 161931255 161931744 -91324839 + L1MC1 LINE L1 5315 5830 -503 1667 198 6 3 chr2 161931741 161932075 -91324508 + L1PB4 LINE L1 4009 4343 -1803 * 4948 185 9 8 chr2 161932068 161933464 -91323119 + L1PB4 LINE L1 4757 6151 -5 1193 157 52 0 chr2 161933467 161933677 -91322906 + L1MC1 LINE L1 5813 6033 -300 233 253 40 0 chr2 161933675 161933750 -91322833 - L1MC5 LINE L1 -1266 6695 6618 * 280 183 0 0 chr2 161934181 161934241 -91322342 + LTR66 LTR ERVL 380 439 -171 280 236 24 24 chr2 161934246 161934369 -91322214 + (TA)n Simple_repeat Simple_repeat 2 124 0 22 56 0 0 chr2 161934651 161934687 -91321896 + AT_rich Low_complexity Low_complexity 1 36 0 483 257 188 27 chr2 161934788 161935193 -91321390 + L1MC5 LINE L1 7308 7777 -184 21 36 0 0 chr2 161936779 161936807 -91319776 + AT_rich Low_complexity Low_complexity 1 28 0 33 0 0 0 chr2 161936861 161936894 -91319689 + AT_rich Low_complexity Low_complexity 1 33 0 21 36 0 0 chr2 161937460 161937488 -91319095 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr2 161937973 161938008 -91318575 + AT_rich Low_complexity Low_complexity 1 35 0 1986 186 48 36 chr2 161939443 161939961 -91316622 - L1MB8 LINE L1 -9 6169 5653 2252 66 7 3 chr2 161940001 161940289 -91316294 + AluSx SINE Alu 1 289 -23 24 0 0 0 chr2 161940289 161940313 -91316270 + AT_rich Low_complexity Low_complexity 1 24 0 2205 277 28 26 chr2 161940313 161940966 -91315617 - L1M4b LINE L1 -5977 882 229 2546 246 86 10 chr2 161941195 161942258 -91314325 + L1ME LINE L1 4475 5615 -547 234 321 44 22 chr2 161943075 161943212 -91313371 + MIR SINE MIR 113 252 -10 342 363 102 8 chr2 161944602 161944858 -91311725 + L2 LINE L2 2456 2735 -579 186 384 27 36 chr2 161945115 161945227 -91311356 + L2 LINE L2 2925 3035 -237 22 0 0 0 chr2 161945604 161945626 -91310957 + AT_rich Low_complexity Low_complexity 1 22 0 664 318 99 45 chr2 161945646 161946152 -91310431 - L2 LINE L2 -619 2695 2163 21 0 0 0 chr2 161946254 161946275 -91310308 + AT_rich Low_complexity Low_complexity 1 21 0 30 27 0 0 chr2 161947000 161947037 -91309546 + AT_rich Low_complexity Low_complexity 1 37 0 21 57 0 0 chr2 161947077 161947112 -91309471 + AT_rich Low_complexity Low_complexity 1 35 0 218 357 0 0 chr2 161947115 161947185 -91309398 + MIR SINE MIR 174 243 -19 252 86 0 0 chr2 161948037 161948072 -91308511 + (TCC)n Simple_repeat Simple_repeat 3 37 0 23 0 0 0 chr2 161948256 161948279 -91308304 + AT_rich Low_complexity Low_complexity 1 23 0 230 250 0 0 chr2 161949410 161949478 -91307105 + L1MC4 LINE L1 6643 6710 -1332 383 219 19 0 chr2 161949479 161949693 -91306890 + (TA)n Simple_repeat Simple_repeat 1 218 0 338 225 40 6 chr2 161949722 161949895 -91306688 + (TA)n Simple_repeat Simple_repeat 2 180 0 2019 115 3 10 chr2 161950613 161950950 -91305633 - AluSx SINE Alu 0 312 1 2832 106 2 28 chr2 161950951 161951045 -91305538 - L1PA13 LINE L1 -11 6152 6057 405 0 0 0 chr2 161951045 161951090 -91305493 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 2119 85 0 3 chr2 161951090 161951373 -91305210 - AluY SINE Alu -29 282 1 2832 106 2 28 chr2 161951373 161951712 -91304871 - L1PA13 LINE L1 -104 6059 5729 788 95 0 17 chr2 161951712 161951828 -91304755 + L1PA13 LINE L1 5625 5738 -430 691 139 0 17 chr2 161953375 161953490 -91303093 - FLAM_A SINE Alu -10 132 20 258 167 0 56 chr2 161953965 161954037 -91302546 + A-rich Low_complexity Low_complexity 3 70 0 251 156 22 0 chr2 161955073 161955118 -91301465 - L2 LINE L2 0 3313 3268 583 328 60 34 chr2 161955194 161955462 -91301121 - L2 LINE L2 -6 3266 2992 196 321 67 57 chr2 161955520 161955713 -91300870 - L2 LINE L2 -340 2974 2780 27 0 0 0 chr2 161955819 161955846 -91300737 + AT_rich Low_complexity Low_complexity 1 27 0 346 316 68 34 chr2 161958499 161958681 -91297902 - MIR3 SINE MIR -39 169 35 185 0 40 0 chr2 161959099 161959124 -91297459 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 22 56 0 0 chr2 161961198 161961234 -91295349 + AT_rich Low_complexity Low_complexity 1 36 0 435 279 58 19 chr2 161961281 161961435 -91295148 - MIR SINE MIR -48 214 55 352 197 33 72 chr2 161961847 161961999 -91294584 + Charlie7 DNA MER1_type 2441 2586 -26 974 228 151 19 chr2 161962320 161962737 -91293846 + MER20B DNA MER1_type 275 746 -37 251 296 0 0 chr2 161963089 161963143 -91293440 + L2 LINE L2 3137 3190 -82 25 0 0 0 chr2 161963938 161963963 -91292620 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr2 161964406 161964429 -91292154 + AT_rich Low_complexity Low_complexity 1 23 0 273 312 91 39 chr2 161964710 161964864 -91291719 - MIR3 SINE MIR -5 203 42 579 188 29 58 chr2 161966170 161966308 -91290275 + LTR53 LTR ERVL 383 516 -3 2235 217 125 100 chr2 161966558 161967652 -91288931 + MER52A LTR ERV1 1 625 -395 22 56 0 0 chr2 161968006 161968042 -91288541 + AT_rich Low_complexity Low_complexity 1 36 0 435 279 58 19 chr2 161968089 161968243 -91288340 - MIR SINE MIR -48 214 55 193 309 0 0 chr2 161969927 161969969 -91286614 - MIR SINE MIR -170 92 51 27 29 0 0 chr2 161970570 161970604 -91285979 + AT_rich Low_complexity Low_complexity 1 34 0 27 0 0 0 chr2 161973046 161973073 -91283510 + AT_rich Low_complexity Low_complexity 1 27 0 642 299 30 5 chr2 161973201 161973398 -91283185 - MIR SINE MIR -49 213 12 196 102 57 45 chr2 161973900 161973988 -91282595 + (TATAA)n Simple_repeat Simple_repeat 5 93 0 207 114 0 0 chr2 161974037 161974072 -91282511 + (GA)n Simple_repeat Simple_repeat 2 36 0 349 271 100 0 chr2 161974510 161974620 -91281963 - MIR SINE MIR -62 146 38 2263 72 0 10 chr2 161978295 161978585 -91277998 - AluY SINE Alu -6 305 19 699 224 13 13 chr2 161978594 161978764 -91277819 + MIR SINE MIR 63 230 -32 23 54 0 0 chr2 161980192 161980229 -91276354 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr2 161980406 161980428 -91276155 + AT_rich Low_complexity Low_complexity 1 22 0 186 263 300 0 chr2 161980604 161980684 -91275899 + L3 LINE CR1 1279 1382 -195 2063 131 3 0 chr2 161980877 161981168 -91275415 - AluSx SINE Alu -20 292 1 34 0 0 0 chr2 161981238 161981272 -91275311 + AT_rich Low_complexity Low_complexity 1 34 0 3189 193 132 9 chr2 161981888 161982442 -91274141 - L1 LINE L1 -786 5360 4683 2661 93 8 8 chr2 161982442 161982817 -91273766 - THE1C LTR MaLR 0 375 1 3189 193 132 9 chr2 161982817 161983036 -91273547 - L1 LINE L1 -1463 4683 4492 21 0 0 0 chr2 161983427 161983448 -91273135 + AT_rich Low_complexity Low_complexity 1 21 0 186 71 0 0 chr2 161983656 161983684 -91272899 + (GA)n Simple_repeat Simple_repeat 2 29 0 286 208 0 83 chr2 161983684 161983780 -91272803 + HAL1 LINE L1 1451 1538 -969 4637 208 47 15 chr2 161983799 161985241 -91271342 - L1MA7 LINE L1 -11 6280 4794 1745 126 76 44 chr2 161985241 161985588 -91270995 - THE1B LTR MaLR 0 444 1 682 192 0 65 chr2 161985594 161985818 -91270765 - L1M2 LINE L1 -770 5527 5336 1060 166 20 15 chr2 161986121 161986320 -91270263 + AluJb SINE Alu 109 308 -4 22 0 0 0 chr2 161987476 161987498 -91269085 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr2 161987638 161987669 -91268914 + AT_rich Low_complexity Low_complexity 1 31 0 222 37 0 0 chr2 161988457 161988484 -91268099 + (TA)n Simple_repeat Simple_repeat 2 28 0 239 235 0 0 chr2 161989612 161989663 -91266920 + L3 LINE CR1 1520 1570 -7 25 0 0 0 chr2 161990072 161990097 -91266486 + AT_rich Low_complexity Low_complexity 1 25 0 28 0 0 0 chr2 161991311 161991339 -91265244 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 161996420 161996441 -91260142 + AT_rich Low_complexity Low_complexity 1 21 0 225 65 0 0 chr2 161999223 161999254 -91257329 + (GAAA)n Simple_repeat Simple_repeat 4 34 0 324 0 0 0 chr2 161999656 161999692 -91256891 + (CA)n Simple_repeat Simple_repeat 1 36 0 463 274 211 15 chr2 162000132 162000398 -91256185 + L1ME LINE L1 5502 5819 -302 925 97 149 51 chr2 162000515 162000690 -91255893 + AluSg/x SINE Alu 112 303 -7 211 309 144 43 chr2 162002060 162002199 -91254384 + MER5A DNA MER1_type 37 189 0 23 33 0 0 chr2 162002570 162002600 -91253983 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr2 162002668 162002696 -91253887 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 162003032 162003053 -91253530 + AT_rich Low_complexity Low_complexity 1 21 0 216 111 0 0 chr2 162003055 162003091 -91253492 + (CAATT)n Simple_repeat Simple_repeat 3 38 0 202 347 0 51 chr2 162003315 162003413 -91253170 - L2 LINE L2 -261 3011 2919 344 320 16 16 chr2 162004119 162004244 -91252339 + REP3 LTR ERV 3 127 -435 293 384 0 20 chr2 162004772 162004918 -91251665 - MIR SINE MIR -110 152 10 322 298 88 44 chr2 162005211 162005483 -91251100 - L1ME LINE L1 -5496 574 291 1192 66 0 0 chr2 162005483 162005635 -91250948 - AluY SINE Alu -3 308 157 183 42 0 0 chr2 162005722 162005746 -91250837 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 369 298 10 0 chr2 162005820 162005924 -91250659 - L1ME LINE L1 -5933 137 33 209 208 0 19 chr2 162006119 162006172 -91250411 + T-rich Low_complexity Low_complexity 4 55 0 4943 280 42 39 chr2 162006794 162009164 -91247419 + L1M3b LINE L1 1 2176 -4175 855 141 59 0 chr2 162010319 162010454 -91246129 + AluJb SINE Alu 147 289 -23 212 271 30 36 chr2 162010548 162010714 -91245869 + (CATATA)n Simple_repeat Simple_repeat 4 168 0 279 0 0 0 chr2 162011440 162011471 -91245112 + (TG)n Simple_repeat Simple_repeat 2 32 0 230 0 33 0 chr2 162011470 162011500 -91245083 + (TA)n Simple_repeat Simple_repeat 2 32 0 * 14746 174 26 18 chr2 162012958 162016726 -91239857 - L1PA13 LINE L1 0 6163 2365 184 277 43 0 chr2 162016817 162016864 -91239719 + MIR SINE MIR 97 145 -63 308 344 116 18 chr2 162018283 162018620 -91237963 + L1MDa LINE L1 1669 2038 -4502 537 311 22 0 chr2 162018680 162018863 -91237720 - MER115 DNA AcHobo 0 693 507 279 273 130 13 chr2 162019672 162019826 -91236757 - HAL1 LINE L1 -932 1575 1404 195 69 0 0 chr2 162019889 162019918 -91236665 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 709 265 80 25 chr2 162020496 162020734 -91235849 + MIR SINE MIR 2 252 -10 2730 67 3 0 chr2 162021211 162021570 -91235013 - L1PA7 LINE L1 0 6154 5795 197 261 0 0 chr2 162021578 162021624 -91234959 - L2 LINE L2 -1053 2261 2216 429 284 71 33 chr2 162022584 162022767 -91233816 + MIR SINE MIR 10 199 -63 2306 226 48 27 chr2 162022774 162023477 -91233106 + L1M4 LINE L1 4348 5065 -1081 808 228 6 0 chr2 162023603 162023774 -91232809 + L1MC1 LINE L1 6142 6313 -20 1934 167 53 0 chr2 162023954 162024313 -91232270 - L1PB4 LINE L1 -3 6153 5776 405 313 61 48 chr2 162025462 162025772 -91230811 - MER102a DNA MER1_type -4 326 13 203 189 0 0 chr2 162025836 162025873 -91230710 + A-rich Low_complexity Low_complexity 1 37 0 22 56 0 0 chr2 162026181 162026217 -91230366 + AT_rich Low_complexity Low_complexity 1 36 0 1088 120 0 0 chr2 162027296 162027446 -91229137 - AluSg/x SINE Alu -9 303 154 233 143 0 20 chr2 162027537 162027586 -91228997 + (ATG)n Simple_repeat Simple_repeat 1 48 0 2357 276 49 39 chr2 162027731 162028602 -91227981 + L1MCb LINE L1 3 882 -5163 647 221 218 16 chr2 162028611 162028914 -91227669 + L1MCb LINE L1 1991 2354 -4210 968 176 0 0 chr2 162028921 162029080 -91227503 - FRAM SINE Alu -16 160 2 912 162 45 15 chr2 162029094 162029292 -91227291 + L1MCb LINE L1 2388 2591 -3973 1041 231 109 0 chr2 162029317 162029620 -91226963 + L1MCb LINE L1 2985 3320 -3244 1318 203 15 15 chr2 162029629 162029925 -91226658 - AluJo SINE Alu 0 308 13 539 279 34 5 chr2 162029938 162030146 -91226437 + L1MCb LINE L1 3327 3540 -3024 20298 132 17 78 chr2 162030170 162034283 -91222300 + L1P LINE L1 12 3874 -2272 461 137 0 0 chr2 162034525 162034598 -91221985 - L1MC3 LINE L1 -1639 6146 6074 1387 247 108 23 chr2 162035448 162036037 -91220546 - L1MC4 LINE L1 -798 7089 6382 445 300 44 6 chr2 162036063 162036223 -91220360 - L1ME2 LINE L1 -9 6155 5990 400 105 0 0 chr2 162036228 162036285 -91220298 - L1PA13 LINE L1 -18 6145 6089 2410 78 6 3 chr2 162036289 162036622 -91219961 - L1PA7 LINE L1 0 6154 5821 862 280 111 49 chr2 162036644 162037108 -91219475 - L1ME LINE L1 -4676 1404 970 27 73 0 0 chr2 162037108 162037163 -91219420 + AT_rich Low_complexity Low_complexity 1 55 0 862 280 111 49 chr2 162037163 162037599 -91218984 - L1ME LINE L1 -5110 970 393 409 170 52 15 chr2 162038213 162038348 -91218235 - L1M4 LINE L1 -3160 2986 2847 500 181 35 4 chr2 162038459 162038575 -91218008 - L1MA9 LINE L1 -12 6292 6171 * 785 175 28 69 chr2 162038561 162038725 -91217858 - L1MA9 LINE L1 -207 6093 5958 1288 208 24 41 chr2 162038725 162039018 -91217565 - AluJo SINE Alu -24 288 1 785 175 28 69 chr2 162039018 162039150 -91217433 - L1MA9 LINE L1 -342 5958 5822 258 239 43 33 chr2 162039138 162039230 -91217353 - L1ME LINE L1 -5302 768 676 * 23 33 0 0 chr2 162039507 162039537 -91217046 + AT_rich Low_complexity Low_complexity 1 30 0 22 70 0 0 chr2 162042661 162042704 -91213879 + AT_rich Low_complexity Low_complexity 1 43 0 392 0 21 0 chr2 162043023 162043071 -91213512 + (TTTTA)n Simple_repeat Simple_repeat 2 50 0 5864 177 16 31 chr2 162043129 162044654 -91211929 - L1PA10 LINE L1 -4 6479 4932 1271 76 0 0 chr2 162044654 162044825 -91211758 - L1PA6 LINE L1 -2 6152 5982 5864 177 16 31 chr2 162044825 162049858 -91206725 - L1PA10 LINE L1 -1551 4932 10 730 279 120 62 chr2 162050216 162050683 -91205900 - MLT1H LTR MaLR -13 536 1 2231 90 7 10 chr2 162051319 162051629 -91204954 + AluY SINE Alu 3 311 0 28 48 0 0 chr2 162051880 162051922 -91204661 + AT_rich Low_complexity Low_complexity 1 42 0 247 329 53 13 chr2 162052298 162052526 -91204057 - L1M4 LINE L1 -2222 3924 3688 1958 122 28 0 chr2 162052805 162053092 -91203491 + AluSq SINE Alu 1 295 -18 21 0 0 0 chr2 162053194 162053215 -91203368 + AT_rich Low_complexity Low_complexity 1 21 0 699 268 6 16 chr2 162053349 162053532 -91203051 + MIR SINE MIR 7 187 -75 189 0 0 0 chr2 162053535 162053556 -91203027 + (TG)n Simple_repeat Simple_repeat 2 22 0 44 0 0 0 chr2 162053556 162053600 -91202983 + AT_rich Low_complexity Low_complexity 1 44 0 857 79 0 0 chr2 162053600 162053714 -91202869 - L1PA8 LINE L1 -3 6169 6056 859 138 0 0 chr2 162053898 162054021 -91202562 - AluSq/x SINE Alu -188 125 3 1521 257 79 28 chr2 162054163 162054633 -91201950 - MLT1D LTR MaLR -5 500 7 895 236 5 10 chr2 162055018 162055213 -91201370 - MLT1B LTR MaLR 0 390 197 719 210 50 108 chr2 162055454 162055897 -91200686 + L1MEd LINE L1 823 1239 -4880 354 267 0 12 chr2 162055898 162055984 -91200599 + Tigger2a DNA MER2_type 5 89 -345 1352 163 17 4 chr2 162055996 162056229 -91200354 + Tigger2a DNA MER2_type 209 444 0 21 0 0 0 chr2 162056303 162056324 -91200259 + AT_rich Low_complexity Low_complexity 1 21 0 1380 154 89 76 chr2 162057499 162057869 -91198714 - THE1C LTR MaLR 0 375 1 9746 120 4 69 chr2 162057869 162059558 -91197025 - THE1C-int LTR MaLR 0 1580 1 1632 167 73 14 chr2 162059558 162059912 -91196671 - THE1C LTR MaLR 0 375 1 323 318 95 0 chr2 162059957 162060105 -91196478 - L1ME LINE L1 -371 5799 5638 236 242 44 0 chr2 162060106 162060197 -91196386 - L1ME LINE L1 -769 5401 5307 198 121 35 17 chr2 162060305 162060363 -91196220 + (TA)n Simple_repeat Simple_repeat 2 60 0 620 282 71 85 chr2 162060416 162061736 -91194847 - L1ME LINE L1 -1930 4216 2915 405 337 99 25 chr2 162061879 162062161 -91194422 - L2 LINE L2 -908 2406 2104 384 251 64 53 chr2 162062216 162062387 -91194196 - L2 LINE L2 -1545 1769 1597 2384 205 30 47 chr2 162062407 162062625 -91193958 + L1ME2 LINE L1 5468 5688 -476 928 116 7 7 chr2 162062625 162062771 -91193812 + L1PB2 LINE L1 6003 6148 -3 2384 205 30 47 chr2 162062771 162063196 -91193387 + L1ME2 LINE L1 5688 6100 -64 189 0 0 0 chr2 162063528 162063549 -91193034 + (T)n Simple_repeat Simple_repeat 1 21 0 400 274 23 63 chr2 162068462 162068637 -91187946 + MIR SINE MIR 40 207 -55 1597 186 55 26 chr2 162068691 162069036 -91187547 - MLT1B LTR MaLR 0 390 36 254 345 18 0 chr2 162069226 162069337 -91187246 + MLT1J2 LTR MaLR 286 398 -52 349 276 124 21 chr2 162069337 162069482 -91187101 + MLT1E LTR MaLR 1 160 -433 1258 315 50 26 chr2 162069486 162069950 -91186633 + MLT1E LTR MaLR 119 593 0 229 354 98 20 chr2 162070016 162070270 -91186313 + L3 LINE CR1 478 751 -826 2169 137 6 11 chr2 162070652 162071002 -91185581 + MER7A DNA MER2_type 1 346 0 329 306 97 49 chr2 162072402 162072546 -91184037 + MIR SINE MIR 17 167 -95 247 263 26 26 chr2 162072556 162072632 -91183951 - MIR SINE MIR 0 262 187 * 269 266 31 0 chr2 162072623 162072687 -91183896 + MIR SINE MIR 189 254 -8 203 236 146 0 chr2 162073796 162073851 -91182732 - L2 LINE L2 -246 3067 3005 417 314 76 54 chr2 162073891 162074299 -91182284 - L1MC/D LINE L1 -2060 5748 5332 1482 203 33 0 chr2 162074548 162074819 -91181764 + AluJb SINE Alu 1 280 -32 183 139 0 0 chr2 162074846 162074882 -91181701 + (TA)n Simple_repeat Simple_repeat 2 37 0 596 291 137 32 chr2 162074902 162075311 -91181272 - L2 LINE L2 -185 3128 2587 1608 206 7 10 chr2 162075367 162075673 -91180910 + AluJb SINE Alu 3 307 -5 3131 181 32 3 chr2 162075947 162076532 -91180051 - MER7C DNA MER2_type 0 602 1 25 0 0 0 chr2 162076613 162076638 -91179945 + AT_rich Low_complexity Low_complexity 1 25 0 965 203 35 62 chr2 162077028 162077368 -91179215 - L1MC/D LINE L1 -969 5177 4847 304 375 83 29 chr2 162077380 162077988 -91178595 + L1M2 LINE L1 10 1572 -5277 452 346 32 45 chr2 162078066 162078378 -91178205 + L1PB4 LINE L1 53 360 -5844 3714 266 34 21 chr2 162078666 162080707 -91175876 + L1PB4 LINE L1 571 2552 -3651 1466 185 73 20 chr2 162080710 162081066 -91175517 + THE1C LTR MaLR 1 375 0 8262 130 12 127 chr2 162081069 162082521 -91174062 + THE1C-int LTR MaLR 4 1215 -365 1814 122 0 0 chr2 162082521 162082775 -91173808 - AluSx SINE Alu -3 309 56 8262 130 12 127 chr2 162082775 162083104 -91173479 + THE1C-int LTR MaLR 1215 1580 0 1705 163 70 20 chr2 162083104 162083461 -91173122 + THE1C LTR MaLR 1 375 0 3123 243 20 11 chr2 162083461 162084365 -91172218 + L1PB4 LINE L1 2551 3462 -2741 4222 199 38 31 chr2 162084365 162086174 -91170409 + L1PB4 LINE L1 4330 6143 -70 1647 259 86 18 chr2 162086169 162087063 -91169520 - L1M4b LINE L1 -3270 3687 2774 * 288 253 24 12 chr2 162087461 162087544 -91169039 + (TATG)n Simple_repeat Simple_repeat 1 84 0 934 178 12 6 chr2 162087544 162087707 -91168876 + Tigger4(Zombi) DNA MER2_type 1 164 -2567 3865 110 5 0 chr2 162087707 162088263 -91168320 + Tigger4(Zombi) DNA MER2_type 2173 2731 0 1648 294 70 16 chr2 162088306 162089920 -91166663 - L1M4b LINE L1 -5123 1732 3 1629 276 83 15 chr2 162089930 162091144 -91165439 - L1ME3 LINE L1 -220 5942 4636 1590 164 82 20 chr2 162091376 162091729 -91164854 - THE1C LTR MaLR 0 375 1 449 59 0 29 chr2 162091729 162091797 -91164786 - THE1C-int LTR MaLR 0 1580 1515 2564 107 5 5 chr2 162091802 162092176 -91164407 - THE1C-int LTR MaLR -1205 375 2 1598 155 63 82 chr2 162092179 162092559 -91164024 - THE1C LTR MaLR -2 373 1 228 35 0 0 chr2 162094934 162094963 -91161620 + (ATG)n Simple_repeat Simple_repeat 2 30 0 365 236 7 0 chr2 162095420 162095568 -91161015 + (TA)n Simple_repeat Simple_repeat 1 149 0 243 0 0 0 chr2 162095570 162095597 -91160986 + (CA)n Simple_repeat Simple_repeat 2 28 0 303 363 71 24 chr2 162097095 162097475 -91159108 + L2 LINE L2 1227 1624 -1690 1867 202 0 3 chr2 162097552 162097883 -91158700 - MSTC LTR MaLR -88 340 11 633 240 47 21 chr2 162097910 162098102 -91158481 - LTR16B LTR ERVL -20 444 248 1427 230 34 14 chr2 162098106 162098458 -91158125 + MSTB2-int LTR MaLR 1285 1643 -8 1144 265 92 12 chr2 162098460 162098883 -91157700 + MSTB2 LTR MaLR 1 457 0 372 303 48 14 chr2 162098883 162099028 -91157555 - LTR16B LTR ERVL -306 158 9 528 198 48 25 chr2 162099031 162099228 -91157355 - L1ME1 LINE L1 -279 5887 5692 922 239 50 75 chr2 162099332 162099797 -91156786 + MSTB2 LTR MaLR 5 457 0 373 318 47 7 chr2 162099797 162099945 -91156638 - LTR16B LTR ERVL -306 158 5 301 372 108 4 chr2 162099949 162100180 -91156403 + L2 LINE L2 1834 2088 -1226 268 324 106 54 chr2 162100258 162100700 -91155883 + L2 LINE L2 2440 2904 -410 3833 173 34 7 chr2 162100877 162101564 -91155019 - MER44D DNA MER2_type 0 705 1 233 366 86 0 chr2 162101759 162101852 -91154731 + MIR SINE MIR 33 133 -75 211 262 0 0 chr2 162101916 162101958 -91154625 + L3b LINE CR1 1528 1569 -14 443 209 115 34 chr2 162102220 162102368 -91154215 + MIR SINE MIR 103 262 0 421 283 99 7 chr2 162105135 162105287 -91151296 - MIR SINE MIR -72 190 25 21 0 0 0 chr2 162105971 162105992 -91150591 + AT_rich Low_complexity Low_complexity 1 21 0 195 298 35 0 chr2 162106564 162106621 -91149962 - MIR SINE MIR -63 145 87 550 108 10 10 chr2 162106847 162106949 -91149634 + (TTCC)n Simple_repeat Simple_repeat 4 105 0 23 0 0 0 chr2 162107461 162107484 -91149099 + AT_rich Low_complexity Low_complexity 1 23 0 3714 125 72 54 chr2 162108827 162109245 -91147338 + LTR1 LTR ERV1 1 441 -344 318 26 0 0 chr2 162109245 162109284 -91147299 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 3714 125 72 54 chr2 162109284 162109626 -91146957 + LTR1 LTR ERV1 441 775 -10 706 352 92 0 chr2 162110589 162110958 -91145625 - L2 LINE L2 0 3313 2911 1301 332 148 18 chr2 162110966 162111575 -91145008 - L2 LINE L2 -560 2754 2226 2056 9 0 0 chr2 162111575 162111801 -91144782 + AluY SINE Alu 86 311 0 1301 332 148 18 chr2 162111801 162112205 -91144378 - L2 LINE L2 -1088 2226 1609 354 395 54 0 chr2 162113282 162113429 -91143154 + MER91A DNA MER1_type 36 190 -6 432 383 60 4 chr2 162113687 162113935 -91142648 + MIR SINE MIR 1 262 0 246 291 164 9 chr2 162113988 162114098 -91142485 + L2 LINE L2 3186 3312 -1 437 277 173 50 chr2 162114226 162114544 -91142039 - MLT1G1 LTR MaLR -22 573 217 824 257 80 14 chr2 162114995 162115419 -91141164 + L1MC5 LINE L1 7474 7925 -36 1019 254 77 19 chr2 162115787 162116098 -91140485 + MLT1I LTR MaLR 81 409 0 344 258 118 21 chr2 162116599 162116779 -91139804 - MLT1I LTR MaLR 0 409 263 229 294 193 0 chr2 162116870 162116979 -91139604 - MLT1I LTR MaLR -279 130 1 180 176 0 0 chr2 162117244 162117278 -91139305 + (TAA)n Simple_repeat Simple_repeat 2 35 0 255 311 0 0 chr2 162117282 162117356 -91139227 - MIR SINE MIR -5 257 184 734 359 54 28 chr2 162118484 162118871 -91137712 + L2 LINE L2 2874 3270 -2 384 325 70 13 chr2 162119065 162119222 -91137361 - MIR SINE MIR -31 231 66 25 51 0 0 chr2 162120615 162120654 -91135929 + AT_rich Low_complexity Low_complexity 1 39 0 570 339 101 67 chr2 162120934 162121380 -91135203 - L3 LINE CR1 -23 1554 1094 371 235 42 17 chr2 162121389 162121508 -91135075 + L1ME1 LINE L1 6043 6164 -2 195 250 287 37 chr2 162121792 162121900 -91134683 - L2 LINE L2 0 3272 3138 331 373 116 10 chr2 162122004 162122449 -91134134 - L2 LINE L2 -199 3073 2581 211 321 147 18 chr2 162122404 162122513 -91134070 - L3 LINE CR1 -920 657 535 * 350 240 30 20 chr2 162122515 162122615 -91133968 + Charlie7 DNA MER1_type 4 104 -2508 180 347 83 0 chr2 162122737 162122809 -91133774 - L3 LINE CR1 -1026 551 474 600 261 36 56 chr2 162123048 162123297 -91133286 + L1MD1 LINE L1 4365 4608 -1538 1838 227 43 29 chr2 162123313 162124168 -91132415 + L1MD1 LINE L1 4710 5569 -745 931 157 0 14 chr2 162124170 162124353 -91132230 - AluJb SINE Alu 0 317 137 784 199 108 19 chr2 162124354 162124381 -91132202 + L1MD1 LINE L1 5555 5578 -664 2235 96 7 0 chr2 162124381 162124683 -91131900 + AluSx SINE Alu 1 304 -8 784 199 108 19 chr2 162124683 162125025 -91131558 + L1MD1 LINE L1 5578 5888 -354 1115 207 153 7 chr2 162125025 162125325 -91131258 + MER2 DNA MER2_type 1 344 0 784 199 108 19 chr2 162125325 162125590 -91130993 + L1MD1 LINE L1 5888 6234 -8 387 98 0 0 chr2 162125738 162125799 -91130784 + (TG)n Simple_repeat Simple_repeat 2 62 0 34 24 0 0 chr2 162126009 162126050 -91130533 + AT_rich Low_complexity Low_complexity 1 41 0 910 191 0 0 chr2 162126552 162126714 -91129869 - AluSg/x SINE Alu -19 293 132 27 62 0 0 chr2 162126726 162126774 -91129809 + AT_rich Low_complexity Low_complexity 1 48 0 2127 148 25 10 chr2 162127003 162127396 -91129187 - L1MA8 LINE L1 0 6291 5893 24 0 0 0 chr2 162130556 162130580 -91126003 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 162131845 162131866 -91124717 + AT_rich Low_complexity Low_complexity 1 21 0 235 280 88 52 chr2 162132477 162132670 -91123913 + L2 LINE L2 3114 3313 0 33 0 0 0 chr2 162133676 162133709 -91122874 + AT_rich Low_complexity Low_complexity 1 33 0 203 0 37 0 chr2 162135010 162135037 -91121546 + (CA)n Simple_repeat Simple_repeat 2 29 0 2346 220 56 18 chr2 162136973 162137527 -91119056 + L1MA4A LINE L1 2 576 -6273 5680 210 12 5 chr2 162137556 162138715 -91117868 + L1MA4A LINE L1 1016 2182 -4667 13205 105 19 0 chr2 162138715 162140611 -91115972 + L1P LINE L1 1 1931 -4215 9357 37 4 2 chr2 162140612 162142526 -91114057 + L1PA5 LINE L1 4239 6154 0 3490 194 24 12 chr2 162142527 162143638 -91112945 + L1MA4A LINE L1 2171 4665 -2183 31065 103 10 23 chr2 162143642 162149312 -91107271 + L1PA7 LINE L1 1 5681 -788 2020 131 0 26 chr2 162149312 162149618 -91106965 + AluSg1 SINE Alu 1 298 -11 31065 103 10 23 chr2 162149618 162150398 -91106185 + L1PA7 LINE L1 5681 6469 0 5741 178 45 21 chr2 162150405 162152190 -91104393 + L1MA4A LINE L1 4654 6513 -492 2523 60 0 10 chr2 162152190 162152504 -91104079 + AluY SINE Alu 1 311 0 5741 178 45 21 chr2 162152504 162153002 -91103581 + L1MA4A LINE L1 6513 6998 -7 352 255 16 1 chr2 162152998 162153148 -91103435 + L1P5 LINE L1 5299 5438 -716 * 207 182 39 13 chr2 162153190 162153267 -91103316 + (TATG)n Simple_repeat Simple_repeat 2 80 0 829 302 16 19 chr2 162153270 162153588 -91102995 + L1ME2 LINE L1 5848 6164 0 22 0 0 0 chr2 162153609 162153631 -91102952 + AT_rich Low_complexity Low_complexity 1 22 0 273 314 82 55 chr2 162155021 162155241 -91101342 + L2 LINE L2 1481 1706 -1608 311 133 36 24 chr2 162155241 162155324 -91101259 + GA-rich Low_complexity Low_complexity 1 84 0 1078 329 107 20 chr2 162155452 162156142 -91100441 + L2 LINE L2 1731 2480 -834 254 377 11 60 chr2 162156149 162156191 -91100392 + L2 LINE L2 2736 2779 -535 2281 193 16 47 chr2 162156191 162156677 -91099906 - MER70A LTR ERVL -1 471 1 254 377 11 60 chr2 162156677 162156817 -91099766 + L2 LINE L2 2779 2909 -405 456 291 81 0 chr2 162157089 162157237 -91099346 + L2 LINE L2 3128 3287 -26 916 218 68 28 chr2 162158109 162158361 -91098222 + ORSL DNA AcHobo 14 275 0 262 335 71 29 chr2 162159840 162160010 -91096573 + MIR SINE MIR 8 184 -78 352 271 118 66 chr2 162160579 162161397 -91095186 + HAL1 LINE L1 838 1767 -740 321 278 94 78 chr2 162161401 162161598 -91094985 + HAL1 LINE L1 1835 2038 -469 1212 158 166 46 chr2 162161598 162161857 -91094726 + AluJb SINE Alu 5 294 -8 321 278 94 78 chr2 162161857 162161904 -91094679 + HAL1 LINE L1 2038 2083 -424 2136 131 3 3 chr2 162165540 162165846 -91090737 + AluSq SINE Alu 3 308 -5 237 159 0 0 chr2 162165962 162166006 -91090577 + (CA)n Simple_repeat Simple_repeat 1 44 0 23 33 0 0 chr2 162166173 162166203 -91090380 + AT_rich Low_complexity Low_complexity 1 30 0 181 391 0 0 chr2 162166488 162166575 -91090008 + L2 LINE L2 3186 3272 0 270 81 0 0 chr2 162166742 162166779 -91089804 + (TG)n Simple_repeat Simple_repeat 2 38 0 614 244 0 0 chr2 162167035 162167166 -91089417 - FLAM_A SINE Alu -2 131 1 21 57 0 0 chr2 162169288 162169323 -91087260 + AT_rich Low_complexity Low_complexity 1 35 0 300 111 0 0 chr2 162170582 162170627 -91085956 + (CA)n Simple_repeat Simple_repeat 2 46 0 414 351 23 0 chr2 162174292 162174423 -91082160 - MIR3 SINE MIR -37 171 38 313 301 36 67 chr2 162174615 162174808 -91081775 + L1MC4a LINE L1 5725 5911 -1897 21 0 0 0 chr2 162174990 162175011 -91081572 + AT_rich Low_complexity Low_complexity 1 21 0 31 0 0 0 chr2 162175157 162175188 -91081395 + AT_rich Low_complexity Low_complexity 1 31 0 25 0 0 0 chr2 162175296 162175321 -91081262 + AT_rich Low_complexity Low_complexity 1 25 0 2199 135 7 52 chr2 162177612 162178020 -91078563 - MLT1B LTR MaLR 0 390 1 22 0 0 0 chr2 162179341 162179363 -91077220 + AT_rich Low_complexity Low_complexity 1 22 0 2056 132 3 0 chr2 162179756 162180066 -91076517 + AluSx SINE Alu 1 311 -1 1268 210 44 26 chr2 162182269 162182654 -91073929 - Charlie5 DNA MER1_type 0 2623 2232 392 261 0 17 chr2 162182651 162182770 -91073813 - Charlie5 DNA MER1_type -2494 118 2 * 1869 121 0 81 chr2 162182819 162183141 -91073442 + AluSx SINE Alu 1 296 -16 389 303 45 45 chr2 162183672 162183870 -91072713 - MIR SINE MIR -30 232 35 277 215 38 0 chr2 162184439 162184518 -91072065 - Charlie4 DNA MER1_type -53 1908 1827 202 280 144 45 chr2 162184668 162184800 -91071783 - L2 LINE L2 -10 3303 3159 649 230 11 43 chr2 162184869 162185056 -91071527 + MIR SINE MIR 79 259 -3 24 53 0 0 chr2 162185077 162185115 -91071468 + AT_rich Low_complexity Low_complexity 1 38 0 1788 180 36 3 chr2 162185139 162185472 -91071111 - MER2 DNA MER2_type 0 344 1 2065 135 3 3 chr2 162186068 162186364 -91070219 - AluSg SINE Alu -14 296 1 2160 93 35 0 chr2 162186459 162186772 -91069811 + L1PA12 LINE L1 5677 6000 -168 11205 79 1 3 chr2 162186774 162188357 -91068226 - HERVL-A1 LTR ERVL -1003 4651 2973 * 16893 76 16 10 chr2 162188349 162191005 -91065578 - HERVL-A1 LTR ERVL -2606 3048 376 3538 62 9 0 chr2 162191105 162191558 -91065025 - HERVL-A1 LTR ERVL -5197 457 1 1473 124 0 29 chr2 162191558 162191604 -91064979 - MLT2A1 LTR ERVL 0 444 398 276 30 0 0 chr2 162191604 162191637 -91064946 + (TG)n Simple_repeat Simple_repeat 2 34 0 1473 124 0 29 chr2 162191637 162191832 -91064751 - MLT2A1 LTR ERVL -46 398 210 23 0 0 0 chr2 162192914 162192937 -91063646 + AT_rich Low_complexity Low_complexity 1 23 0 515 233 45 60 chr2 162194252 162194556 -91062027 - LTR16A1 LTR ERVL 0 457 107 290 304 33 22 chr2 162194585 162194677 -91061906 - LTR16A1 LTR ERVL -346 111 19 41 58 0 0 chr2 162195403 162195472 -91061111 + AT_rich Low_complexity Low_complexity 1 69 0 2351 228 96 40 chr2 162195635 162196521 -91060062 + L1ME1 LINE L1 5127 6154 -12 348 361 13 93 chr2 162198118 162198495 -91058088 + L2 LINE L2 2918 3264 -8 925 286 65 12 chr2 162199271 162199670 -91056913 - L1MEc LINE L1 -3394 2821 2402 1889 285 88 39 chr2 162199722 162201199 -91055384 - L1MEc LINE L1 -4064 2332 783 246 260 0 0 chr2 162201937 162202010 -91054573 + (TA)n Simple_repeat Simple_repeat 1 73 0 5468 107 14 21 chr2 162203046 162204349 -91052234 - L1PA14 LINE L1 0 6161 4849 10906 186 45 24 chr2 162204349 162205311 -91051272 + L1P LINE L1 2377 3317 -2829 1804 146 168 14 chr2 162205311 162205680 -91050903 - MSTA LTR MaLR -2 426 1 10906 186 45 24 chr2 162205680 162207158 -91049425 + L1P LINE L1 3317 4870 -1276 26 0 0 0 chr2 162207776 162207802 -91048781 + AT_rich Low_complexity Low_complexity 1 26 0 240 211 10 19 chr2 162209255 162209359 -91047224 + (TA)n Simple_repeat Simple_repeat 2 104 0 30 27 0 0 chr2 162209737 162209774 -91046809 + AT_rich Low_complexity Low_complexity 1 37 0 25 0 0 0 chr2 162210277 162210302 -91046281 + AT_rich Low_complexity Low_complexity 1 25 0 2678 112 21 9 chr2 162212120 162212772 -91043811 - L1M2 LINE L1 -4941 1908 3 274 255 32 0 chr2 162214115 162214209 -91042374 + L1ME LINE L1 5684 5780 -341 1957 134 10 0 chr2 162214269 162214561 -91042022 + AluSx SINE Alu 4 298 -14 466 263 52 33 chr2 162214643 162214668 -91041915 + L1ME3A LINE L1 5676 5699 -467 2138 98 3 14 chr2 162214668 162214965 -91041618 + AluY SINE Alu 2 295 -16 466 263 52 33 chr2 162214965 162215140 -91041443 + L1ME3A LINE L1 5699 5882 -284 1616 196 7 0 chr2 162215183 162215468 -91041115 - AluJo SINE Alu -23 289 3 216 0 0 0 chr2 162215493 162215517 -91041066 + (CA)n Simple_repeat Simple_repeat 1 24 0 227 95 95 0 chr2 162215718 162215781 -91040802 + (TAGA)n Simple_repeat Simple_repeat 2 70 0 536 324 69 20 chr2 162215883 162216130 -91040453 + MIR SINE MIR 2 260 -2 777 311 61 59 chr2 162216765 162217157 -91039426 - LTR16C LTR ERVL -2 489 97 251 291 75 30 chr2 162217477 162217611 -91038972 + L1ME LINE L1 5579 5718 -403 299 133 0 17 chr2 162217647 162217707 -91038876 + (ATG)n Simple_repeat Simple_repeat 1 59 0 593 289 57 57 chr2 162217753 162217981 -91038602 - MIR SINE MIR -3 259 32 225 261 70 26 chr2 162217981 162218096 -91038487 + L1ME LINE L1 5789 5908 -213 201 74 0 0 chr2 162218747 162218774 -91037809 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 361 274 85 12 chr2 162218992 162219240 -91037343 + L1M4 LINE L1 2297 2562 -3584 2368 96 0 0 chr2 162219716 162220018 -91036565 - AluSx SINE Alu -10 302 1 213 213 157 74 chr2 162220979 162221087 -91035496 - MIR SINE MIR -57 205 89 1565 105 0 23 chr2 162221562 162221781 -91034802 - AluSq SINE Alu -91 222 9 13934 136 44 13 chr2 162222359 162224691 -91031892 + Tigger1 DNA MER2_type 2 2404 -14 23 0 0 0 chr2 162226554 162226577 -91030006 + AT_rich Low_complexity Low_complexity 1 23 0 476 291 28 0 chr2 162226698 162226839 -91029744 - MIR SINE MIR -111 151 7 402 311 184 18 chr2 162227014 162227410 -91029173 - L2 LINE L2 -954 2360 1899 23 0 0 0 chr2 162227831 162227854 -91028729 + AT_rich Low_complexity Low_complexity 1 23 0 354 91 0 0 chr2 162228368 162228423 -91028160 + (CA)n Simple_repeat Simple_repeat 2 56 0 21 0 0 0 chr2 162228443 162228464 -91028119 + AT_rich Low_complexity Low_complexity 1 21 0 705 302 69 62 chr2 162229360 162229797 -91026786 + MLT1L LTR MaLR 19 458 -157 42297 34 22 2 chr2 162229798 162235826 -91020757 + L1PA2 LINE L1 2 6155 0 330 67 0 0 chr2 162235838 162235883 -91020700 - ALR/Alpha Satellite centromeric -26 146 102 2747 220 125 41 chr2 162235973 162237023 -91019560 + L1ME1 LINE L1 4272 5536 -630 1449 226 30 24 chr2 162237023 162237395 -91019188 - MLT1A2 LTR MaLR 0 374 1 2747 220 125 41 chr2 162237395 162238025 -91018558 + L1ME1 LINE L1 5536 6112 -54 26 30 0 0 chr2 162239080 162239113 -91017470 + AT_rich Low_complexity Low_complexity 1 33 0 27 29 0 0 chr2 162239415 162239449 -91017134 + AT_rich Low_complexity Low_complexity 1 34 0 257 343 57 9 chr2 162240943 162241048 -91015535 + MIR SINE MIR 37 146 -62 1502 199 61 28 chr2 162241421 162241783 -91014800 - MLT1A2 LTR MaLR 0 374 1 396 0 0 0 chr2 162242001 162242045 -91014538 + (TG)n Simple_repeat Simple_repeat 1 44 0 3410 119 51 0 chr2 162242346 162242832 -91013751 + MER1A DNA MER1_type 19 529 0 577 264 0 0 chr2 162242907 162243047 -91013536 - Charlie1 DNA MER1_type 0 2761 2622 553 234 25 6 chr2 162243043 162243201 -91013382 - Charlie1 DNA MER1_type -2534 227 67 * 33 73 0 0 chr2 162243454 162243522 -91013061 + AT_rich Low_complexity Low_complexity 1 68 0 872 351 15 29 chr2 162243574 162243984 -91012599 + L1M3a LINE L1 1542 1945 -5541 1052 306 24 5 chr2 162244457 162244840 -91011743 + L1M3a LINE L1 1899 2288 -5277 30 45 0 0 chr2 162244840 162244884 -91011699 + AT_rich Low_complexity Low_complexity 1 44 0 433 283 33 13 chr2 162244895 162245047 -91011536 - L2 LINE L2 -1956 1358 1204 1794 142 163 39 chr2 162245085 162245466 -91011117 - MSTA LTR MaLR 0 428 1 444 176 6 132 chr2 162245499 162245658 -91010925 + Charlie4 DNA MER1_type 1823 1961 0 371 308 42 67 chr2 162245884 162246241 -91010342 - L1M4 LINE L1 -2660 3486 3139 681 241 39 25 chr2 162246257 162246460 -91010123 + MIR SINE MIR 47 252 -10 771 323 79 37 chr2 162247865 162248519 -91008064 + L1MC4a LINE L1 4745 5439 -682 1824 161 7 0 chr2 162248519 162248824 -91007759 - AluSx SINE Alu 0 307 1 771 323 79 37 chr2 162248824 162248930 -91007653 + L1MC4a LINE L1 5439 5539 -582 402 278 54 45 chr2 162248959 162249272 -91007311 + L1MC4a LINE L1 5616 5931 -1877 1141 321 90 50 chr2 162249357 162250304 -91006279 - L2 LINE L2 0 3313 2321 232 265 29 0 chr2 162250337 162250405 -91006178 - MIR SINE MIR -44 218 149 521 132 0 0 chr2 162252120 162252211 -91004372 - MER53 DNA DNA -4 185 95 801 189 61 0 chr2 162252221 162252385 -91004198 + FRAM SINE Alu 2 175 -1 23 0 0 0 chr2 162252388 162252411 -91004172 + AT_rich Low_complexity Low_complexity 1 23 0 189 365 19 19 chr2 162252968 162253075 -91003508 + MIR SINE MIR 35 141 -67 455 281 96 25 chr2 162253298 162253497 -91003086 + L1MEd LINE L1 2 214 -5905 10542 205 23 31 chr2 162253573 162254102 -91002481 - L1PA16 LINE L1 -1 6165 5633 315 0 0 0 chr2 162254102 162254137 -91002446 + (TA)n Simple_repeat Simple_repeat 2 36 0 10542 205 23 31 chr2 162254137 162255858 -91000725 - L1PA16 LINE L1 -533 5633 3899 1864 104 21 0 chr2 162255858 162256145 -91000438 - L1MA2 LINE L1 -4 6300 6008 10542 205 23 31 chr2 162256145 162256949 -90999634 - L1PA16 LINE L1 -2267 3899 3090 198 0 0 0 chr2 162256949 162256971 -90999612 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 2057 98 0 4 chr2 162256974 162257249 -90999334 - AluY SINE Alu -22 289 16 10542 205 23 31 chr2 162257249 162257801 -90998782 - L1PA16 LINE L1 -3078 3088 2592 1575 204 0 4 chr2 162257802 162258082 -90998501 + AluJb SINE Alu 1 279 -33 205 39 77 19 chr2 162258086 162258138 -90998445 + (TA)n Simple_repeat Simple_repeat 1 55 0 383 246 16 63 chr2 162258141 162258267 -90998316 - L1PA16 LINE L1 -3550 2596 2477 405 270 59 20 chr2 162258872 162259024 -90997559 + MLT1J2 LTR MaLR 3 160 -290 40 21 0 0 chr2 162260397 162260444 -90996139 + AT_rich Low_complexity Low_complexity 1 47 0 1692 177 0 45 chr2 162260503 162260630 -90995953 + AluSx SINE Alu 1 132 -180 198 71 0 0 chr2 162260630 162260658 -90995925 + (CAAAA)n Simple_repeat Simple_repeat 1 28 0 1692 177 0 45 chr2 162260658 162260841 -90995742 + AluSx SINE Alu 132 297 -15 1102 265 106 7 chr2 162261454 162261756 -90994827 + MLT1G LTR MaLR 39 370 -220 500 222 105 52 chr2 162261815 162261936 -90994647 + MLT1A1 LTR MaLR 1 114 -260 5538 136 9 4 chr2 162261936 162263566 -90993017 + L1PA16 LINE L1 4521 6157 -9 500 222 105 52 chr2 162263566 162263769 -90992814 + MLT1A1 LTR MaLR 114 363 -11 1025 220 35 28 chr2 162263792 162264058 -90992525 - MLT1D LTR MaLR -16 489 246 963 229 51 16 chr2 162264162 162264415 -90992168 - MLT1D LTR MaLR -243 262 1 804 249 11 28 chr2 162264427 162264608 -90991975 - MER45A DNA AcHobo 0 178 1 590 286 62 10 chr2 162264612 162264804 -90991779 + MLT1G LTR MaLR 389 590 0 402 294 135 19 chr2 162265069 162265440 -90991143 + L1ME4a LINE L1 5616 6029 -92 282 236 58 81 chr2 162265772 162265946 -90990637 + L1MC/D LINE L1 5685 5856 -265 302 313 21 0 chr2 162265947 162266043 -90990540 + GA-rich Low_complexity Low_complexity 5 102 0 31 0 0 0 chr2 162266053 162266084 -90990499 + AT_rich Low_complexity Low_complexity 1 31 0 32 91 0 0 chr2 162266189 162266277 -90990306 + AT_rich Low_complexity Low_complexity 1 88 0 23 68 0 0 chr2 162266567 162266611 -90989972 + AT_rich Low_complexity Low_complexity 1 44 0 191 319 0 34 chr2 162267208 162267305 -90989278 + MER5B DNA MER1_type 60 164 -25 1733 166 52 0 chr2 162267923 162268213 -90988370 - AluJb SINE Alu -7 305 1 239 214 143 10 chr2 162268589 162268687 -90987896 - LTR33 LTR ERVL 0 521 411 497 286 51 29 chr2 162268725 162268900 -90987683 - LTR33 LTR ERVL -339 182 4 444 224 28 9 chr2 162269154 162269261 -90987322 - MER94 DNA DNA -20 114 6 25 51 0 0 chr2 162269392 162269431 -90987152 + AT_rich Low_complexity Low_complexity 1 39 0 6641 193 150 10 chr2 162269581 162271075 -90985508 - MER52A LTR ERV1 0 1755 53 1811 192 104 16 chr2 162271690 162272248 -90984335 - MER39 LTR ERV1 -25 682 1 506 292 83 41 chr2 162272249 162272612 -90983971 + L1 LINE L1 2797 3174 -2972 25 65 0 0 chr2 162272761 162272807 -90983776 + AT_rich Low_complexity Low_complexity 1 46 0 395 270 133 54 chr2 162273027 162273268 -90983315 + L1 LINE L1 3684 3943 -2203 2217 120 57 14 chr2 162273615 162273964 -90982619 - THE1B LTR MaLR 0 364 1 370 289 100 56 chr2 162274540 162274789 -90981794 + MIR SINE MIR 1 260 -2 4772 106 13 24 chr2 162275184 162275374 -90981209 - LTR8 LTR ERV1 0 691 500 1850 173 39 15 chr2 162275374 162275709 -90980874 + MER61A LTR ERV1 1 343 0 4772 106 13 24 chr2 162275709 162276217 -90980366 - LTR8 LTR ERV1 -191 500 1 195 100 0 0 chr2 162276981 162277011 -90979572 + (GA)n Simple_repeat Simple_repeat 1 30 0 25 31 0 0 chr2 162279332 162279364 -90977219 + AT_rich Low_complexity Low_complexity 1 32 0 3619 117 29 0 chr2 162329472 162330387 -90926196 - L1PA8A LINE L1 -407 5724 4795 935 76 8 0 chr2 162330389 162330521 -90926062 + L1P4 LINE L1 5338 5470 -691 530 75 0 32 chr2 162330521 162330615 -90925968 - L1PA12 LINE L1 0 6168 6078 274 321 68 19 chr2 162330992 162331154 -90925429 - MIR SINE MIR -47 215 46 285 261 159 11 chr2 162331335 162331423 -90925160 + MER5A DNA MER1_type 6 106 -83 1532 237 44 35 chr2 162332005 162332461 -90924122 - MLT1C LTR MaLR 0 467 8 25 65 0 0 chr2 162332875 162332921 -90923662 + AT_rich Low_complexity Low_complexity 1 46 0 258 165 47 82 chr2 162333276 162333361 -90923222 - HsTC2 DNA Tc2 -1807 91 10 500 66 0 26 chr2 162336102 162336178 -90920405 + L1PA8 LINE L1 6097 6170 -2 3479 60 0 0 chr2 162337380 162337815 -90918768 + L1PA7 LINE L1 5709 6143 -11 2028 111 7 39 chr2 162339355 162339661 -90916922 - AluSx SINE Alu -16 296 1 21 0 0 0 chr2 162339890 162339911 -90916672 + AT_rich Low_complexity Low_complexity 1 21 0 2042 114 29 10 chr2 162339912 162340218 -90916365 + AluSx SINE Alu 1 312 0 473 46 0 15 chr2 162340220 162340285 -90916298 + (GGAA)n Simple_repeat Simple_repeat 2 65 0 246 258 0 0 chr2 162340369 162340458 -90916125 + GA-rich Low_complexity Low_complexity 1 89 0 699 151 0 35 chr2 162340671 162340843 -90915740 + GA-rich Low_complexity Low_complexity 1 166 0 659 302 56 34 chr2 162341063 162341384 -90915199 - MER102a DNA MER1_type 0 330 3 716 279 91 26 chr2 162342331 162342671 -90913912 + L1MC4a LINE L1 3680 4041 -2105 464 258 44 13 chr2 162342674 162342833 -90913750 + L1MC4a LINE L1 5727 5890 -1918 370 216 0 72 chr2 162342838 162342935 -90913648 + MLT1F1 LTR MaLR 42 131 -436 1874 222 81 16 chr2 162342935 162343481 -90913102 + L1MD3 LINE L1 7410 7990 -5 427 289 132 4 chr2 162343481 162343709 -90912874 + L1MC4a LINE L1 5875 6131 -1677 1917 100 0 8 chr2 162344221 162344480 -90912103 - AluSg SINE Alu -17 293 37 283 204 122 10 chr2 162344951 162345049 -90911534 + L1MC4a LINE L1 6121 6229 -1579 937 262 62 64 chr2 162345111 162345630 -90910953 + L1MC4 LINE L1 7525 8042 0 1737 124 15 0 chr2 162346512 162346808 -90909775 + L1PA14 LINE L1 5879 6178 0 277 331 8 24 chr2 162347203 162347327 -90909256 + L1MCa LINE L1 742 863 -5553 209 299 0 23 chr2 162348184 162348271 -90908312 + GA-rich Low_complexity Low_complexity 4 88 0 6698 212 33 25 chr2 162348331 162350122 -90906461 + L1PA13 LINE L1 7 2894 -4680 5180 176 31 22 chr2 162350125 162351145 -90905438 - L1P LINE L1 -3639 2507 1479 2462 233 82 20 chr2 162351138 162351445 -90905138 + L1MCa LINE L1 2417 2703 -3723 * 2620 23 0 16 chr2 162351445 162351752 -90904831 - AluYa5 SINE Alu -9 302 1 2462 233 82 20 chr2 162351752 162352054 -90904529 + L1MCa LINE L1 2703 2985 -3441 2143 115 10 0 chr2 162352054 162352350 -90904233 + AluSg SINE Alu 1 299 -11 2462 233 82 20 chr2 162352350 162352714 -90903869 + L1MCa LINE L1 2985 3454 -2972 4093 174 17 162 chr2 162352714 162352982 -90903601 + L1PA13 LINE L1 5563 5868 -1716 387 0 0 0 chr2 162352982 162353025 -90903558 + (CA)n Simple_repeat Simple_repeat 2 44 0 4093 174 17 162 chr2 162353025 162354185 -90902398 + L1PA13 LINE L1 5868 6783 -801 180 0 0 0 chr2 162354185 162354205 -90902378 + (TTTTC)n Simple_repeat Simple_repeat 2 21 0 3333 122 10 11 chr2 162354214 162354737 -90901846 - L1PA10 LINE L1 0 6168 5647 2101 125 54 0 chr2 162354883 162355236 -90901347 + L1PA13 LINE L1 7215 7586 -15 3161 159 22 5 chr2 162355240 162356100 -90900483 + L1P4 LINE L1 4903 5775 -391 2678 175 28 4 chr2 162356100 162356596 -90899987 + L1P3 LINE L1 1 508 -5367 15823 163 110 34 chr2 162356596 162360017 -90896566 + L1P3 LINE L1 771 4522 -1939 2452 88 38 0 chr2 162360017 162360356 -90896227 - THE1A LTR MaLR -3 352 1 15823 163 110 34 chr2 162360356 162360576 -90896007 + L1P3 LINE L1 4522 4724 -1737 825 212 17 55 chr2 162360581 162360874 -90895709 + L1MC1 LINE L1 4738 5019 -1127 5646 162 24 11 chr2 162360976 162362013 -90894570 + L1MC1 LINE L1 5272 6322 -11 1811 141 0 72 chr2 162362013 162362365 -90894218 - AluSx SINE Alu 0 330 1 560 289 30 88 chr2 162362594 162362857 -90893726 + MIR SINE MIR 9 256 -6 844 285 66 41 chr2 162362987 162363398 -90893185 + LTR33A LTR ERVL 53 473 -50 2256 191 51 0 chr2 162363721 162364150 -90892433 - MLT1C LTR MaLR -16 451 1 267 114 0 0 chr2 162365348 162365392 -90891191 + (TG)n Simple_repeat Simple_repeat 2 45 0 243 0 0 0 chr2 162366162 162366189 -90890394 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 209 261 43 0 chr2 162367618 162367664 -90888919 - MIR SINE MIR -108 100 53 180 179 0 0 chr2 162368333 162368372 -90888211 + GA-rich Low_complexity Low_complexity 4 42 0 30 0 0 0 chr2 162369344 162369374 -90887209 + AT_rich Low_complexity Low_complexity 1 30 0 342 239 0 0 chr2 162370889 162370956 -90885627 - L2 LINE L2 -5 3267 3201 305 347 58 53 chr2 162370994 162371184 -90885399 - L2 LINE L2 -184 3088 2898 2088 111 7 0 chr2 162371727 162372007 -90884576 + AluSp SINE Alu 1 282 -31 261 0 0 0 chr2 162372010 162372039 -90884544 + (CAA)n Simple_repeat Simple_repeat 2 30 0 186 336 0 65 chr2 162372200 162372307 -90884276 - L2 LINE L2 -554 2760 2661 240 239 0 42 chr2 162374942 162375013 -90881570 + GA-rich Low_complexity Low_complexity 4 71 0 22 35 0 0 chr2 162377005 162377034 -90879549 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr2 162378525 162378554 -90878029 + AT_rich Low_complexity Low_complexity 1 29 0 405 0 0 0 chr2 162380511 162380556 -90876027 + (TG)n Simple_repeat Simple_repeat 1 45 0 660 243 88 80 chr2 162380602 162380853 -90875730 - MIR SINE MIR 0 262 10 304 354 46 11 chr2 162381036 162381211 -90875372 - MIR SINE MIR 0 262 82 236 281 58 41 chr2 162381212 162381333 -90875250 + MIR SINE MIR 57 179 -83 180 0 0 0 chr2 162381492 162381512 -90875071 + (A)n Simple_repeat Simple_repeat 1 20 0 804 249 89 58 chr2 162382197 162382498 -90874085 + MLT1I LTR MaLR 74 387 -22 555 258 144 12 chr2 162382498 162382665 -90873918 - MER5A DNA MER1_type 0 189 1 804 249 89 58 chr2 162382665 162382689 -90873894 + MLT1I LTR MaLR 387 409 0 204 346 53 15 chr2 162382860 162382993 -90873590 - MIR SINE MIR -32 230 93 412 238 84 97 chr2 162383648 162383947 -90872636 + L1ME4a LINE L1 5786 6080 -41 22 0 0 0 chr2 162384155 162384177 -90872406 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 162384188 162384210 -90872373 + AT_rich Low_complexity Low_complexity 1 22 0 1000 183 11 0 chr2 162384216 162384396 -90872187 + L1 LINE L1 3943 4124 -2022 21 0 0 0 chr2 162384514 162384535 -90872048 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr2 162385064 162385085 -90871498 + (GTTTG)n Simple_repeat Simple_repeat 2 22 0 710 257 31 109 chr2 162385726 162386084 -90870499 - L2 LINE L2 0 3313 2984 2110 153 3 0 chr2 162386087 162386440 -90870143 - L1PB1 LINE L1 -4 6147 5794 252 0 0 0 chr2 162386443 162386471 -90870112 + (TA)n Simple_repeat Simple_repeat 1 28 0 4785 232 22 13 chr2 162386571 162387771 -90868812 + L1 LINE L1 3928 5137 -1009 1497 88 19 0 chr2 162387770 162387985 -90868598 + L1P5 LINE L1 5330 5548 -603 * 245 291 100 14 chr2 162388316 162388536 -90868047 + L1MC/D LINE L1 5583 5821 -1987 24 67 0 0 chr2 162388740 162388785 -90867798 + AT_rich Low_complexity Low_complexity 1 45 0 3665 37 7 0 chr2 162388847 162389309 -90867274 - L1P LINE L1 -800 5346 4882 4837 30 5 0 chr2 162389309 162389879 -90866704 + L1PA4 LINE L1 5576 6153 -2 662 278 48 19 chr2 162390218 162390427 -90866156 + MIR SINE MIR 6 220 -42 531 241 78 0 chr2 162390644 162390760 -90865823 - L2 LINE L2 0 3313 3189 447 291 186 0 chr2 162391931 162392168 -90864415 - L2 LINE L2 0 3313 3033 581 260 121 72 chr2 162393001 162393228 -90863355 - MLT1K LTR MaLR -36 552 297 1618 182 0 42 chr2 162393228 162393536 -90863047 - AluJo SINE Alu -15 297 3 581 260 121 72 chr2 162393536 162393697 -90862886 - MLT1K LTR MaLR -291 297 145 3697 107 11 8 chr2 162394195 162394720 -90861863 + MER1A DNA MER1_type 1 527 0 281 233 198 0 chr2 162395228 162395314 -90861269 - L3 LINE CR1 -143 1434 1332 229 182 0 0 chr2 162395359 162395392 -90861191 + AluJb SINE Alu 1 33 -267 1785 145 54 18 chr2 162395393 162395724 -90860859 - MER61A LTR ERV1 0 343 1 1620 181 0 0 chr2 162395724 162396003 -90860580 + AluJb SINE Alu 31 309 0 226 320 48 48 chr2 162396004 162396129 -90860454 - L3 LINE CR1 -493 1084 960 1863 210 57 36 chr2 162396287 162396782 -90859801 + MLT1D LTR MaLR 1 505 0 261 229 14 14 chr2 162397052 162397122 -90859461 + LTR33A LTR ERVL 452 521 -2 423 333 56 60 chr2 162397305 162397572 -90859011 - L2 LINE L2 -2 3270 3005 291 364 51 8 chr2 162398080 162398198 -90858385 + MIR3 SINE MIR 14 136 -72 198 191 0 0 chr2 162398270 162398312 -90858271 + T-rich Low_complexity Low_complexity 3 44 0 1811 162 10 0 chr2 162399723 162400031 -90856552 + L1MC1 LINE L1 6023 6333 0 291 386 25 13 chr2 162400077 162400235 -90856348 + L2 LINE L2 3154 3313 0 714 233 38 6 chr2 162400793 162400952 -90855631 + AluJo SINE Alu 113 276 -36 212 171 0 0 chr2 162402626 162402667 -90853916 + T-rich Low_complexity Low_complexity 2 42 0 8571 163 33 6 chr2 162406512 162409259 -90847324 - L1PBa LINE L1 -2805 4057 1093 3257 229 70 15 chr2 162409262 162410249 -90846334 - L1PBa LINE L1 -5817 1046 6 388 300 228 12 chr2 162410309 162410559 -90846024 - L2 LINE L2 -418 2896 2593 392 255 0 35 chr2 162411231 162411372 -90845211 + MER103 DNA DNA 22 157 -9 23 33 0 0 chr2 162412294 162412324 -90844259 + AT_rich Low_complexity Low_complexity 1 30 0 1207 183 0 19 chr2 162412684 162412988 -90843595 - MLT1A1 LTR MaLR 0 365 1 23 33 0 0 chr2 162413278 162413308 -90843275 + AT_rich Low_complexity Low_complexity 1 30 0 599 307 41 4 chr2 162414209 162414453 -90842130 + L2 LINE L2 564 816 -2498 5273 195 40 9 chr2 162414498 162415154 -90841429 - L1MC1 LINE L1 0 6333 5699 1660 218 37 8 chr2 162415154 162415507 -90841076 + MLT1A1 LTR MaLR 3 365 0 5273 195 40 9 chr2 162415507 162416735 -90839848 - L1MC1 LINE L1 -634 5699 4375 698 217 49 0 chr2 162416879 162417022 -90839561 + MER58A DNA MER1_type 37 186 -38 2421 292 111 22 chr2 162417022 162418079 -90838504 + L2 LINE L2 812 1962 -1352 869 308 50 37 chr2 162418150 162418471 -90838112 - LTR16C LTR ERVL -74 417 93 1809 283 144 42 chr2 162418549 162419784 -90836799 + L2 LINE L2 1954 3312 -1 1255 257 63 65 chr2 162419891 162419909 -90836674 + L1MD2 LINE L1 3512 3529 -2617 1763 238 73 22 chr2 162419909 162420400 -90836183 - LTR40a LTR ERVL -1 518 3 1255 257 63 65 chr2 162420400 162421078 -90835505 + L1MD2 LINE L1 3529 4207 -1939 907 266 23 4 chr2 162421069 162421332 -90835251 + L1MD2 LINE L1 5670 5937 -422 * 554 233 0 0 chr2 162421350 162421453 -90835130 + L2 LINE L2 2660 2762 -552 370 308 8 25 chr2 162421465 162421585 -90834998 + L1ME1 LINE L1 5951 6068 -98 1162 188 114 96 chr2 162421655 162422165 -90834418 + L1ME2 LINE L1 5594 6112 -52 358 353 32 0 chr2 162423066 162423222 -90833361 - MER117 DNA MER1_type -33 164 4 396 0 0 0 chr2 162425997 162426041 -90830542 + (CA)n Simple_repeat Simple_repeat 2 45 0 319 265 26 34 chr2 162426197 162426314 -90830269 + L2 LINE L2 1890 2005 -1309 410 290 11 57 chr2 162427064 162427240 -90829343 - L2 LINE L2 0 3313 3146 885 247 13 21 chr2 162427269 162427508 -90829075 + L1ME1 LINE L1 4767 5003 -1143 * 6620 221 27 39 chr2 162427485 162428649 -90827934 + L1MC1 LINE L1 3426 4603 -1569 1909 155 10 0 chr2 162428649 162428939 -90827644 + AluJb SINE Alu 1 293 -19 6620 221 27 39 chr2 162428939 162429468 -90827115 + L1MC1 LINE L1 4603 5084 -1088 1717 42 19 0 chr2 162429468 162429681 -90826902 - L1PA3 LINE L1 -1 6154 5938 6620 221 27 39 chr2 162429681 162430023 -90826560 + L1MC1 LINE L1 5084 5429 -743 742 181 21 0 chr2 162430019 162430163 -90826420 + L1MA6 LINE L1 6026 6172 -128 * 21 0 0 0 chr2 162430174 162430195 -90826388 + AT_rich Low_complexity Low_complexity 1 21 0 539 188 0 36 chr2 162430309 162430417 -90826166 + L1MA6 LINE L1 6164 6267 -33 509 79 26 0 chr2 162430417 162430493 -90826090 - MADE1 DNA Mariner 0 80 3 539 188 0 36 chr2 162430493 162430522 -90826061 + L1MA6 LINE L1 6267 6296 -4 4821 173 25 5 chr2 162430526 162431423 -90825160 + L1MC1 LINE L1 5417 6331 -2 3132 234 16 62 chr2 162431426 162431714 -90824869 + L1ME1 LINE L1 4985 5284 -1028 7007 46 26 0 chr2 162431714 162432864 -90823719 + L1PA5 LINE L1 4981 6154 0 3132 234 16 62 chr2 162432864 162433816 -90822767 + L1ME1 LINE L1 5284 6312 0 931 298 68 10 chr2 162433863 162434155 -90822428 - L2 LINE L2 -578 2736 2428 607 306 16 25 chr2 162434181 162434423 -90822160 - L2 LINE L2 -1150 2164 1925 208 296 62 12 chr2 162434459 162434540 -90822043 - L2 LINE L2 -13 3300 3216 2194 65 18 0 chr2 162434723 162435040 -90821543 - AluY SINE Alu 0 322 1 613 347 29 4 chr2 162435952 162436191 -90820392 - MIR SINE MIR 0 262 18 493 189 45 9 chr2 162437055 162437166 -90819417 + FRAM SINE Alu 60 174 -2 27 0 0 0 chr2 162437207 162437234 -90819349 + AT_rich Low_complexity Low_complexity 1 27 0 729 97 9 0 chr2 162437317 162437431 -90819152 + L1MA9 LINE L1 6198 6312 0 3520 183 20 33 chr2 162438099 162438865 -90817718 - L1MB8 LINE L1 0 6178 5423 21 0 0 0 chr2 162438895 162438916 -90817667 + AT_rich Low_complexity Low_complexity 1 21 0 1088 165 17 32 chr2 162438916 162439192 -90817391 - L1MB8 LINE L1 -743 5403 5158 598 212 11 34 chr2 162439203 162439382 -90817201 - L1MB8 LINE L1 -3653 2493 2319 2159 119 3 3 chr2 162439383 162439686 -90816897 - AluSx SINE Alu -9 303 1 267 351 30 38 chr2 162439834 162439965 -90816618 + MER5A DNA MER1_type 51 180 -9 23 0 0 0 chr2 162440731 162440754 -90815829 + AT_rich Low_complexity Low_complexity 1 23 0 1586 255 24 24 chr2 162440787 162441199 -90815384 - MLT1F LTR MaLR 0 542 131 1527 179 41 31 chr2 162441209 162441527 -90815056 + THE1C LTR MaLR 55 375 0 1089 146 34 10 chr2 162441528 162441733 -90814850 - Tigger1 DNA MER2_type 0 2418 2209 701 173 113 8 chr2 162441737 162441870 -90814713 - Tigger1 DNA MER2_type -2271 147 1 427 237 166 84 chr2 162442187 162442626 -90813957 - MLT1H LTR MaLR -40 509 35 369 339 103 31 chr2 162443615 162443907 -90812676 + L3b LINE CR1 1102 1414 -169 226 0 100 0 chr2 162444121 162444161 -90812422 + (TTTA)n Simple_repeat Simple_repeat 2 180 0 2173 72 14 4 chr2 162444161 162444440 -90812143 - AluY SINE Alu -1 321 1 989 117 0 0 chr2 162444524 162444669 -90811914 - AluSc SINE Alu -7 302 158 1420 158 31 17 chr2 162444670 162444962 -90811621 + L1MB5 LINE L1 5667 5962 -212 1034 270 126 3 chr2 162444962 162445288 -90811295 - L2 LINE L2 -804 2510 2145 1319 203 56 40 chr2 162445292 162445818 -90810765 - L1M3 LINE L1 -691 5489 4961 24 0 0 0 chr2 162445821 162445845 -90810738 + AT_rich Low_complexity Low_complexity 1 24 0 269 278 103 32 chr2 162445850 162445976 -90810607 + L2 LINE L2 3179 3313 0 2431 73 0 25 chr2 162446135 162446451 -90810132 + AluY SINE Alu 1 308 -3 2544 102 16 13 chr2 162446481 162446855 -90809728 + THE1C LTR MaLR 1 375 0 10416 112 11 35 chr2 162446856 162448475 -90808108 + THE1C-int LTR MaLR 2 1580 0 2201 114 58 17 chr2 162448475 162448835 -90807748 + THE1C LTR MaLR 1 375 0 2296 99 3 0 chr2 162448918 162449220 -90807363 - AluY SINE Alu 0 311 9 250 311 131 0 chr2 162451599 162451721 -90804862 - MER91C DNA MER1_type 0 140 3 2470 144 12 132 chr2 162452602 162452856 -90803727 + MLT2B3 LTR ERVL 1 145 -375 2581 119 6 0 chr2 162452856 162453218 -90803365 - THE1B LTR MaLR 0 364 1 2470 144 12 132 chr2 162453218 162453554 -90803029 + MLT2B3 LTR ERVL 145 520 0 496 206 72 83 chr2 162453995 162454175 -90802408 + MIR SINE MIR 81 258 -4 399 366 51 14 chr2 162455890 162456106 -90800477 + MLT1K LTR MaLR 7 230 -358 * 521 281 63 102 chr2 162456098 162456252 -90800331 + MLT1K LTR MaLR 154 312 -276 357 24 0 0 chr2 162456252 162456294 -90800289 + (TTTTG)n Simple_repeat Simple_repeat 3 44 0 521 281 63 102 chr2 162456294 162456319 -90800264 + MLT1K LTR MaLR 312 336 -252 2379 94 3 0 chr2 162456319 162456626 -90799957 + AluY SINE Alu 1 308 -3 521 281 63 102 chr2 162456626 162456887 -90799696 + MLT1K LTR MaLR 336 578 -10 292 320 0 0 chr2 162457269 162457344 -90799239 - L2 LINE L2 0 3313 3239 2171 117 0 19 chr2 162464823 162465139 -90791444 + AluSx SINE Alu 1 310 -2 1150 149 5 10 chr2 162465980 162466174 -90790409 - L1PA16 LINE L1 -5 6161 5969 328 323 154 0 chr2 162466386 162466587 -90789996 + L1ME LINE L1 5364 5595 -526 7641 46 1 0 chr2 162466588 162467527 -90789056 - L1PA5 LINE L1 -1364 4782 3843 7284 40 6 0 chr2 162467527 162468881 -90787702 + L1PA5 LINE L1 4788 6146 -8 183 204 0 0 chr2 162472096 162472140 -90784443 + (TA)n Simple_repeat Simple_repeat 2 45 0 748 266 15 75 chr2 162474309 162474576 -90782007 - MIR SINE MIR 0 262 12 27 73 0 0 chr2 162476023 162476078 -90780505 + AT_rich Low_complexity Low_complexity 1 55 0 302 306 24 0 chr2 162477021 162477106 -90779477 + MIR3 SINE MIR 90 176 -32 344 277 157 24 chr2 162478091 162478257 -90778326 - MIR3 SINE MIR -1 207 20 199 337 24 0 chr2 162478281 162478364 -90778219 - MIR3 SINE MIR -5 203 119 464 348 11 16 chr2 162479117 162479304 -90777279 - L2 LINE L2 -259 3054 2869 3166 173 24 0 chr2 162479312 162479906 -90776677 - L1PA13 LINE L1 -771 5375 4768 * 5791 69 23 0 chr2 162479902 162480681 -90775902 + L1PA13 LINE L1 5366 6162 -1 250 116 319 14 chr2 162481959 162482028 -90774555 + MER99 DNA DNA 2 91 -737 36 53 0 0 chr2 162482136 162482193 -90774390 + AT_rich Low_complexity Low_complexity 1 57 0 26 88 0 0 chr2 162482232 162482300 -90774283 + AT_rich Low_complexity Low_complexity 1 68 0 30 0 0 0 chr2 162482333 162482363 -90774220 + AT_rich Low_complexity Low_complexity 1 30 0 2912 197 49 15 chr2 162482735 162483023 -90773560 + MER99 DNA DNA 192 469 -359 393 39 0 0 chr2 162483023 162483074 -90773509 + (CA)n Simple_repeat Simple_repeat 1 51 0 2912 197 49 15 chr2 162483074 162483400 -90773183 + MER99 DNA DNA 469 827 -1 246 263 0 0 chr2 162483477 162483534 -90773049 + (TA)n Simple_repeat Simple_repeat 2 58 0 606 254 11 40 chr2 162484534 162484711 -90771872 - MER5B DNA MER1_type -1 177 6 1466 173 10 62 chr2 162484847 162485154 -90771429 - MER47A DNA MER2_type -75 291 1 1850 163 0 25 chr2 162485284 162485604 -90770979 - AluSx SINE Alu 0 312 1 534 316 18 18 chr2 162485838 162486110 -90770473 + L1PBa LINE L1 101 372 -6491 22 0 0 0 chr2 162486664 162486686 -90769897 + AT_rich Low_complexity Low_complexity 1 22 0 1505 191 40 10 chr2 162487439 162487738 -90768845 - AluJo SINE Alu -2 310 3 2218 112 0 3 chr2 162490288 162490584 -90765999 + AluSx SINE Alu 9 303 -9 1970 109 0 0 chr2 162490658 162490914 -90765669 + AluSx SINE Alu 37 292 -20 189 0 0 0 chr2 162490914 162490935 -90765648 + (GA)n Simple_repeat Simple_repeat 2 22 0 420 278 15 5 chr2 162491471 162491630 -90764953 + MLT1J2 LTR MaLR 62 222 -224 711 235 118 11 chr2 162491655 162491842 -90764741 + MER20 DNA MER1_type 12 218 -1 268 298 19 19 chr2 162491885 162491989 -90764594 + MLT1J1 LTR MaLR 287 390 -56 24 32 0 0 chr2 162492396 162492427 -90764156 + GC_rich Low_complexity Low_complexity 1 31 0 1276 55 6 0 chr2 162495302 162495467 -90761116 + L1PA5 LINE L1 5989 6154 0 423 0 0 0 chr2 162497357 162497404 -90759179 + (TG)n Simple_repeat Simple_repeat 2 48 0 1584 63 0 10 chr2 162498073 162498280 -90758303 - AluYa5 SINE Alu -9 302 98 1479 119 75 17 chr2 162498284 162498577 -90758006 + L1M1 LINE L1 2831 3140 -4425 5861 181 8 4 chr2 162498589 162499680 -90756903 + L1P LINE L1 1440 2535 -3611 9647 112 65 1 chr2 162499782 162501343 -90755240 - L1PBa LINE L1 -3942 2921 1261 843 251 19 5 chr2 162501883 162502098 -90754485 - MER20 DNA MER1_type -1 218 1 437 368 57 41 chr2 162502363 162502822 -90753761 - L2 LINE L2 0 3272 2807 516 188 83 49 chr2 162502944 162502984 -90753599 - MLT2B1 LTR ERVL 0 520 483 459 0 0 0 chr2 162502984 162503035 -90753548 + (TG)n Simple_repeat Simple_repeat 1 51 0 516 188 83 49 chr2 162503035 162503138 -90753445 - MLT2B1 LTR ERVL -37 483 372 946 217 0 20 chr2 162503140 162503343 -90753240 - MLT2B1 LTR ERVL -321 199 1 1931 139 3 22 chr2 162504906 162505222 -90751361 + AluSx SINE Alu 1 310 -2 1150 149 5 10 chr2 162506062 162506256 -90750327 - L1PA16 LINE L1 -5 6161 5969 1761 158 10 17 chr2 162506554 162506845 -90749738 + AluJo SINE Alu 6 294 -18 212 415 34 0 chr2 162506949 162507067 -90749516 - L3 LINE CR1 -1271 306 185 236 53 26 0 chr2 162508195 162508233 -90748350 + (TA)n Simple_repeat Simple_repeat 1 39 0 886 246 93 20 chr2 162508670 162509023 -90747560 + L1ME3A LINE L1 5787 6165 -5 2021 94 12 76 chr2 162509105 162509434 -90747149 - AluSx SINE Alu -4 308 1 358 264 243 0 chr2 162509589 162509729 -90746854 + L1ME LINE L1 5484 5657 -464 21 0 0 0 chr2 162509882 162509903 -90746680 + AT_rich Low_complexity Low_complexity 1 21 0 314 329 29 15 chr2 162510497 162510634 -90745949 - L3b LINE CR1 -232 1351 1213 185 218 146 0 chr2 162510706 162510761 -90745822 + L2 LINE L2 3003 3065 -207 2116 140 0 0 chr2 162511259 162511552 -90745031 + AluSx SINE Alu 1 293 -19 22 35 0 0 chr2 162512399 162512428 -90744155 + AT_rich Low_complexity Low_complexity 1 29 0 288 228 17 39 chr2 162515481 162515661 -90740922 + GA-rich Low_complexity Low_complexity 3 178 0 3420 197 49 85 chr2 162515982 162517097 -90739486 - L1MDa LINE L1 -4401 2139 1065 21 36 0 0 chr2 162517576 162517604 -90738979 + AT_rich Low_complexity Low_complexity 1 28 0 227 196 20 0 chr2 162518675 162518726 -90737857 - MIR3 SINE MIR -38 170 119 703 251 148 5 chr2 162519167 162519447 -90737136 + L1ME4a LINE L1 5528 5849 -272 30 0 0 0 chr2 162519665 162519695 -90736888 + AT_rich Low_complexity Low_complexity 1 30 0 185 150 0 25 chr2 162520060 162520100 -90736483 + (CA)n Simple_repeat Simple_repeat 2 40 0 28 71 0 0 chr2 162520195 162520251 -90736332 + AT_rich Low_complexity Low_complexity 1 56 0 27 0 0 0 chr2 162521478 162521505 -90735078 + AT_rich Low_complexity Low_complexity 1 27 0 337 231 67 114 chr2 162522143 162522329 -90734254 - L1ME3A LINE L1 -3 6159 5987 1706 155 3 45 chr2 162522329 162522639 -90733944 - AluSx SINE Alu -15 297 1 337 231 67 114 chr2 162522639 162522680 -90733903 - L1ME3A LINE L1 -175 5987 5946 333 0 0 0 chr2 162522680 162522717 -90733866 + (TA)n Simple_repeat Simple_repeat 1 37 0 226 109 22 0 chr2 162522747 162522793 -90733790 - L1 LINE L1 -1801 4345 4299 255 93 0 0 chr2 162522808 162522851 -90733732 + (TA)n Simple_repeat Simple_repeat 2 44 0 2059 126 3 3 chr2 162522851 162523137 -90733446 - AluSg SINE Alu -24 286 1 1454 247 65 39 chr2 162523147 162523637 -90732946 - L1ME3A LINE L1 -230 5940 5438 17123 197 20 13 chr2 162523642 162525400 -90731183 - L1PA15 LINE L1 -4 6812 5067 194 0 39 0 chr2 162525400 162525426 -90731157 + (TTTTA)n Simple_repeat Simple_repeat 4 30 0 17123 197 20 13 chr2 162525426 162527457 -90729126 - L1PA15 LINE L1 -1749 5067 2984 2004 157 3 0 chr2 162527457 162527763 -90728820 + AluSq SINE Alu 1 307 -6 17123 197 20 13 chr2 162527763 162528777 -90727806 - L1PA15 LINE L1 -3832 2984 1978 366 290 13 19 chr2 162528928 162529083 -90727500 - L1ME3A LINE L1 -808 5338 5185 23 0 0 0 chr2 162529088 162529111 -90727472 + AT_rich Low_complexity Low_complexity 1 23 0 3961 219 10 75 chr2 162529833 162531422 -90725161 + L1PA12 LINE L1 2029 3451 -4133 243 0 0 0 chr2 162531422 162531449 -90725134 + (TC)n Simple_repeat Simple_repeat 1 27 0 3961 219 10 75 chr2 162531449 162531926 -90724657 + L1PA12 LINE L1 3451 3957 -3627 814 254 173 26 chr2 162531990 162532332 -90724251 + MLT1I LTR MaLR 16 407 -2 1668 205 26 17 chr2 162532351 162532702 -90723881 + MLT1A1 LTR MaLR 11 364 -1 2530 187 48 37 chr2 162533611 162534173 -90722410 + L1 LINE L1 17 584 -6981 * 5311 115 56 19 chr2 162534152 162534825 -90721758 + L1 LINE L1 2136 2857 -4708 1994 0 0 0 chr2 162534825 162535038 -90721545 - AluYa5 SINE Alu -1 310 98 5311 115 56 19 chr2 162535038 162535333 -90721250 + L1 LINE L1 2857 3140 -4425 21508 166 10 9 chr2 162535345 162539367 -90717216 + L1PA11 LINE L1 1440 5465 -709 535 157 0 0 chr2 162539370 162539453 -90717130 - AluSg/x SINE Alu -14 296 214 4707 105 8 24 chr2 162539455 162540178 -90716405 + L1PA11 LINE L1 5460 6171 -3 4502 199 28 1 chr2 162540183 162541115 -90715468 + L1 LINE L1 4688 5644 -1921 1631 233 71 27 chr2 162541115 162541784 -90714799 + L1M1 LINE L1 3811 4560 -3005 2331 234 52 34 chr2 162541788 162542614 -90713969 + L1M1 LINE L1 4820 5660 -1905 33 25 0 0 chr2 162542614 162542654 -90713929 + AT_rich Low_complexity Low_complexity 1 40 0 2146 236 56 11 chr2 162542703 162543326 -90713257 + L1M1 LINE L1 5971 6621 -944 17531 184 38 8 chr2 162543337 162547573 -90709010 + L1MB7 LINE L1 1 4370 -2492 182 175 0 35 chr2 162547656 162547713 -90708870 + C-rich Low_complexity Low_complexity 4 58 0 183 80 0 0 chr2 162549215 162549240 -90707343 + (A)n Simple_repeat Simple_repeat 1 25 0 316 246 152 64 chr2 162550243 162550473 -90706110 + L1PB1 LINE L1 528 1392 -5457 327 318 39 16 chr2 162550586 162550715 -90705868 - L2 LINE L2 0 3313 3182 619 171 0 0 chr2 162552162 162552267 -90704316 + L1PB1 LINE L1 4463 4567 -2281 * 6950 157 26 11 chr2 162552266 162554558 -90702025 + L1PB1 LINE L1 4527 6848 -5 3793 167 86 54 chr2 162554566 162554645 -90701938 + L1MB7 LINE L1 5905 5980 -920 490 110 0 37 chr2 162554645 162554727 -90701856 - MADE1 DNA Mariner -1 79 1 3793 167 86 54 chr2 162554727 162554912 -90701671 + L1MB7 LINE L1 5980 6158 -742 2149 135 0 0 chr2 162554912 162555209 -90701374 + AluSx SINE Alu 1 297 -15 3793 167 86 54 chr2 162555209 162555909 -90700674 + L1MB7 LINE L1 6158 6900 0 228 377 0 0 chr2 162555938 162556076 -90700507 - L1M4 LINE L1 -2287 3859 3722 233 182 45 0 chr2 162556099 162556143 -90700440 - MLT1B LTR MaLR 0 390 345 629 199 91 11 chr2 162556169 162556345 -90700238 + L1M4 LINE L1 4549 4738 -1408 1690 196 22 52 chr2 162556348 162556750 -90699833 - MLT1B LTR MaLR 0 390 1 35 41 0 0 chr2 162557123 162557172 -90699411 + AT_rich Low_complexity Low_complexity 1 49 0 464 324 98 12 chr2 162557184 162557604 -90698979 - L1ME LINE L1 -304 5817 5362 670 249 12 24 chr2 162557966 162558135 -90698448 - LTR67 LTR ERVL -7 550 384 586 294 82 0 chr2 162558603 162558773 -90697810 + MIR SINE MIR 8 191 -71 518 172 50 0 chr2 162559309 162559408 -90697175 - MLT1D LTR MaLR -5 500 397 499 185 11 0 chr2 162559488 162559580 -90697003 - LTR67 LTR ERVL -8 549 457 1330 211 100 30 chr2 162559586 162559956 -90696627 - MLT1D LTR MaLR -109 396 1 24 32 0 0 chr2 162560032 162560063 -90696520 + AT_rich Low_complexity Low_complexity 1 31 0 5225 140 60 9 chr2 162560065 162561014 -90695569 - L1MA4 LINE L1 -4 6296 5295 210 37 0 0 chr2 162561014 162561041 -90695542 + (TTA)n Simple_repeat Simple_repeat 2 28 0 5225 140 60 9 chr2 162561041 162561063 -90695520 - L1MA4 LINE L1 -1005 5295 5276 2148 129 3 3 chr2 162561101 162561404 -90695179 - AluSx SINE Alu -9 303 1 26 64 0 0 chr2 162561878 162561925 -90694658 + AT_rich Low_complexity Low_complexity 1 47 0 29 0 0 0 chr2 162562030 162562059 -90694524 + AT_rich Low_complexity Low_complexity 1 29 0 2287 102 3 0 chr2 162562121 162562416 -90694167 + AluSx SINE Alu 2 297 -15 2119 106 17 3 chr2 162563662 162563954 -90692629 - AluSq SINE Alu -17 296 1 316 248 50 58 chr2 162564462 162564583 -90692000 + L1MC5 LINE L1 7812 7931 -30 194 311 0 0 chr2 162565298 162565343 -90691240 + MIR SINE MIR 120 164 -98 180 0 0 0 chr2 162566111 162566131 -90690452 + (T)n Simple_repeat Simple_repeat 1 20 0 890 332 59 81 chr2 162566171 162566984 -90689599 + L3 LINE CR1 404 1198 -379 320 290 105 16 chr2 162567099 162567223 -90689360 - L2 LINE L2 0 3313 3179 241 380 60 7 chr2 162567406 162567556 -90689027 + L3 LINE CR1 1327 1484 -93 298 304 68 50 chr2 162567751 162567912 -90688671 - MER5B DNA MER1_type -14 164 1 248 323 15 0 chr2 162567912 162567960 -90688623 + L3b LINE CR1 1531 1579 -4 1547 228 33 63 chr2 162568447 162568550 -90688033 - MLT1D LTR MaLR 0 505 400 2289 104 3 0 chr2 162568550 162568848 -90687735 + AluSg SINE Alu 1 299 -11 1547 228 33 63 chr2 162568848 162569265 -90687318 - MLT1D LTR MaLR -105 400 1 2525 111 11 3 chr2 162569511 162569872 -90686711 + THE1B LTR MaLR 1 364 0 518 174 0 0 chr2 162570261 162570353 -90686230 + AluJb SINE Alu 213 304 -8 286 276 141 25 chr2 162570512 162570711 -90685872 + L2 LINE L2 3080 3301 -12 2374 69 0 3 chr2 162570715 162571006 -90685577 + AluY SINE Alu 1 290 -21 1570 146 32 0 chr2 162571238 162571484 -90685099 + AluSx SINE Alu 11 264 -48 586 318 123 28 chr2 162571660 162572132 -90684451 + L1MB3 LINE L1 5384 5900 -283 3597 142 19 27 chr2 162572545 162573216 -90683367 + L1PA5 LINE L1 4660 5325 -821 42654 34 22 2 chr2 162573218 162579271 -90677312 + L1PA2 LINE L1 2 6155 0 1984 131 3 0 chr2 162579304 162579587 -90676996 + AluSx SINE Alu 1 284 -28 3623 179 24 87 chr2 162579625 162580514 -90676069 + L1PA5 LINE L1 5318 6150 -4 25 0 0 0 chr2 162580517 162580542 -90676041 + AT_rich Low_complexity Low_complexity 1 25 0 1146 238 114 68 chr2 162580659 162580876 -90675707 + L1MC4 LINE L1 7382 7588 -454 1600 194 24 24 chr2 162580876 162581054 -90675529 + MER58B DNA MER1_type 1 181 -2239 2250 98 0 33 chr2 162581054 162581361 -90675222 + AluSq SINE Alu 1 297 -16 1600 194 24 24 chr2 162581361 162581522 -90675061 + MER58B DNA MER1_type 180 340 -1 1146 238 114 68 chr2 162581522 162581935 -90674648 + L1MC4 LINE L1 7588 8041 -1 805 303 124 57 chr2 162582087 162582391 -90674192 + L2 LINE L2 2424 2706 -607 2158 122 3 26 chr2 162582391 162582734 -90673849 - MER1B DNA MER1_type 0 337 3 805 303 124 57 chr2 162582734 162583226 -90673357 + L2 LINE L2 2706 3306 -7 427 315 23 8 chr2 162583210 162583340 -90673243 - L2 LINE L2 0 3313 3182 * 190 270 127 0 chr2 162584972 162585035 -90671548 + L3 LINE CR1 284 354 -1223 278 336 114 0 chr2 162585088 162585228 -90671355 + L3 LINE CR1 355 510 -1067 1893 151 3 0 chr2 162585613 162585911 -90670672 - AluJb SINE Alu -13 299 1 687 143 0 0 chr2 162586070 162586168 -90670415 - FRAM SINE Alu -20 156 59 320 286 75 8 chr2 162586178 162586311 -90670272 - MIR SINE MIR 0 262 121 374 258 23 47 chr2 162588616 162588744 -90667839 - MIR SINE MIR -59 203 79 692 240 28 23 chr2 162589044 162589261 -90667322 - L1M4 LINE L1 -1581 4565 4348 2582 43 0 10 chr2 162589577 162589879 -90666704 + AluY SINE Alu 1 299 -12 222 150 0 0 chr2 162589903 162589943 -90666640 + (A)n Simple_repeat Simple_repeat 1 40 0 277 320 90 0 chr2 162590817 162590939 -90665644 - MIR SINE MIR -10 252 120 468 278 53 62 chr2 162591122 162591331 -90665252 - MIR SINE MIR -31 231 25 412 266 28 9 chr2 162591405 162591514 -90665069 + MIR SINE MIR 40 150 -58 315 311 156 0 chr2 162592427 162592607 -90663976 + MIR SINE MIR 42 249 -13 279 179 263 11 chr2 162592611 162592706 -90663877 + L1ME1 LINE L1 6043 6161 -5 284 355 35 7 chr2 162592855 162592996 -90663587 - LTR67 LTR ERVL -299 258 114 836 260 71 26 chr2 162593311 162593661 -90662922 + L1ME4a LINE L1 5490 5855 -266 336 222 0 14 chr2 162594128 162594200 -90662383 - MIR SINE MIR -6 256 186 22 0 0 0 chr2 162594563 162594585 -90661998 + AT_rich Low_complexity Low_complexity 1 22 0 651 304 49 20 chr2 162595406 162595653 -90660930 - L3 LINE CR1 -1 1576 1323 470 300 131 54 chr2 162595796 162596109 -90660474 - L3 LINE CR1 -258 1319 983 674 223 16 21 chr2 162596902 162597090 -90659493 + MER53 DNA DNA 1 187 -2 219 204 0 0 chr2 162597113 162597162 -90659421 + CT-rich Low_complexity Low_complexity 3 51 0 1837 235 38 38 chr2 162597512 162598142 -90658441 + L1ME1 LINE L1 5519 6148 -18 287 303 53 68 chr2 162599400 162599532 -90657051 - L2 LINE L2 -5 3267 3138 2393 171 34 13 chr2 162599626 162600093 -90656490 + L1PA16 LINE L1 5666 6142 -24 23 86 0 0 chr2 162600979 162601037 -90655546 + AT_rich Low_complexity Low_complexity 1 58 0 23 0 0 0 chr2 162601891 162601914 -90654669 + AT_rich Low_complexity Low_complexity 1 23 0 2220 55 0 17 chr2 162602392 162602684 -90653899 - L1PA5 LINE L1 -4 6150 5864 480 262 35 21 chr2 162602868 162603013 -90653570 + L2 LINE L2 3166 3312 -1 246 313 0 0 chr2 162603201 162603265 -90653318 + L2 LINE L2 3208 3271 -1 971 183 10 0 chr2 162604082 162604290 -90652293 - L1MA6 LINE L1 0 6300 6091 224 258 45 0 chr2 162604841 162604907 -90651676 - MIR3 SINE MIR -7 201 133 182 313 52 43 chr2 162605124 162605239 -90651344 + MIR SINE MIR 81 196 -66 415 231 157 0 chr2 162605504 162605612 -90650971 + L2 LINE L2 3188 3312 -1 331 246 56 32 chr2 162605775 162605901 -90650682 - MIR SINE MIR -58 204 76 2291 103 0 0 chr2 162605920 162606211 -90650372 - AluSq SINE Alu -21 292 2 3474 212 42 32 chr2 162607701 162608795 -90647788 - L1ME1 LINE L1 -75 6091 4973 2048 133 0 0 chr2 162608795 162609109 -90647474 - AluSx SINE Alu 0 319 6 3474 212 42 32 chr2 162609109 162609874 -90646709 - L1ME1 LINE L1 -1193 4973 4217 304 340 9 19 chr2 162610015 162610121 -90646462 - L1M4 LINE L1 -5672 1183 1079 376 272 116 17 chr2 162610472 162610645 -90645938 - L1M4 LINE L1 -6599 260 71 908 206 57 14 chr2 162611149 162611358 -90645225 + MER20 DNA MER1_type 2 219 0 763 135 8 29 chr2 162611412 162611651 -90644932 + MER1B DNA MER1_type 1 339 0 2588 203 42 84 chr2 162611762 162611853 -90644730 - MER69 DNA AcHobo -3 2523 2430 279 0 0 0 chr2 162611853 162611884 -90644699 + (TCTCCC)n Simple_repeat Simple_repeat 3 33 0 6878 70 19 9 chr2 162611884 162613320 -90643263 + SVA Other Other 53 1386 0 2588 203 42 84 chr2 162613320 162613524 -90643059 - MER69 DNA AcHobo -95 2431 2220 1507 161 8 8 chr2 162613524 162613779 -90642804 - AluJb SINE Alu -8 304 50 417 39 0 0 chr2 162613779 162613830 -90642753 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 1813 102 75 0 chr2 162613831 162614086 -90642497 - AluSc SINE Alu -30 279 6 2588 203 42 84 chr2 162614086 162614747 -90641836 - MER69 DNA AcHobo -305 2221 1609 1728 175 7 0 chr2 162614747 162615072 -90641511 - AluJb SINE Alu 0 327 1 2588 203 42 84 chr2 162615072 162615199 -90641384 - MER69 DNA AcHobo -917 1609 1478 488 252 17 0 chr2 162615234 162615353 -90641230 - MER69 DNA AcHobo -1104 122 2 659 274 98 5 chr2 162615354 162615569 -90641014 - LTR33 LTR ERVL -277 244 10 221 348 133 27 chr2 162617083 162617376 -90639207 + L2 LINE L2 2468 2791 -523 547 204 57 102 chr2 162617791 162617967 -90638616 - MER5A DNA MER1_type -21 168 1 292 269 125 0 chr2 162618228 162618332 -90638251 + MIR SINE MIR 44 160 -102 602 203 29 14 chr2 162618863 162619001 -90637582 - MLT1G LTR MaLR -57 533 394 247 289 45 45 chr2 162619057 162619213 -90637370 - MLT1G LTR MaLR -195 395 240 1636 184 113 3 chr2 162619367 162619693 -90636890 + MLT1A1 LTR MaLR 4 365 0 1433 187 4 50 chr2 162619809 162620087 -90636496 + AluJb SINE Alu 14 278 -34 26 0 0 0 chr2 162620088 162620114 -90636469 + AT_rich Low_complexity Low_complexity 1 26 0 730 272 76 27 chr2 162620132 162620356 -90636227 + MIR SINE MIR 22 256 -6 368 286 167 0 chr2 162620639 162620765 -90635818 + L2 LINE L2 3121 3267 -5 21 0 0 0 chr2 162622360 162622381 -90634202 + AT_rich Low_complexity Low_complexity 1 21 0 1940 107 33 0 chr2 162622500 162622821 -90633762 + AluY SINE Alu 3 332 0 6255 78 5 13 chr2 162622972 162623918 -90632665 + L1PA8 LINE L1 5216 6154 -18 773 216 6 6 chr2 162624063 162624225 -90632358 - MER45A DNA AcHobo 0 178 17 349 159 0 0 chr2 162625188 162625257 -90631326 + L1M3 LINE L1 4566 4634 -1512 1182 120 0 6 chr2 162625269 162625444 -90631139 + AluSg/x SINE Alu 137 310 -2 2857 158 37 79 chr2 162625452 162625628 -90630955 + L1M3 LINE L1 4639 4821 -1347 2073 141 0 10 chr2 162625628 162625934 -90630649 + AluSx SINE Alu 1 303 -9 2857 158 37 79 chr2 162625934 162626729 -90629854 + L1M3 LINE L1 4821 5563 -605 870 211 6 0 chr2 162626733 162626894 -90629689 + FRAM SINE Alu 2 163 -13 1048 75 5 43 chr2 162626894 162627080 -90629503 + (GGAGA)n Simple_repeat Simple_repeat 1 179 0 308 233 0 0 chr2 162627180 162627266 -90629317 + HAL1 LINE L1 2253 2338 -169 334 272 15 52 chr2 162627272 162627408 -90629175 + HAL1 LINE L1 2376 2506 -1 196 287 80 67 chr2 162627557 162627707 -90628876 + L2 LINE L2 2635 2786 -528 1265 205 98 41 chr2 162627714 162628080 -90628503 - MSTD LTR MaLR 0 396 10 214 304 54 62 chr2 162628305 162628417 -90628166 + L2 LINE L2 3112 3222 -50 595 216 101 0 chr2 162628621 162628769 -90627814 - MIR SINE MIR -37 225 63 1553 146 204 22 chr2 162628801 162629163 -90627420 - MSTA LTR MaLR 0 428 1 28 29 0 0 chr2 162631199 162631234 -90625349 + AT_rich Low_complexity Low_complexity 1 35 0 391 246 14 56 chr2 162632772 162632914 -90623669 - L3b LINE CR1 -346 1237 1102 23 0 0 0 chr2 162636413 162636436 -90620147 + AT_rich Low_complexity Low_complexity 1 23 0 338 250 108 40 chr2 162637160 162637308 -90619275 + MIR SINE MIR 48 205 -57 1407 113 158 63 chr2 162638270 162638588 -90617995 + AluSx SINE Alu 1 345 0 364 234 35 41 chr2 162638766 162638911 -90617672 + MER112 DNA MER1_type 116 259 -1 180 0 0 0 chr2 162641866 162641886 -90614697 + (CA)n Simple_repeat Simple_repeat 1 20 0 300 70 0 0 chr2 162644875 162644918 -90611665 + (TG)n Simple_repeat Simple_repeat 2 44 0 339 320 7 31 chr2 162646103 162646270 -90610313 + CT-rich Low_complexity Low_complexity 5 280 0 186 209 0 0 chr2 162648223 162648266 -90608317 + T-rich Low_complexity Low_complexity 1 43 0 183 80 0 0 chr2 162652489 162652514 -90604069 + (T)n Simple_repeat Simple_repeat 1 25 0 201 175 0 0 chr2 162653999 162654039 -90602544 + (CTG)n Simple_repeat Simple_repeat 2 41 0 37 0 0 0 chr2 162654881 162654918 -90601665 + AT_rich Low_complexity Low_complexity 1 37 0 453 19 0 0 chr2 162655303 162655357 -90601226 + (CA)n Simple_repeat Simple_repeat 1 54 0 38 22 0 0 chr2 162661908 162661953 -90594630 + GC_rich Low_complexity Low_complexity 1 45 0 523 255 70 69 chr2 162665133 162665561 -90591022 + LTR33A LTR ERVL 3 515 -8 540 305 81 14 chr2 162666654 162666877 -90589706 + MLT1K LTR MaLR 351 588 0 1804 179 0 16 chr2 162667371 162667703 -90588880 - AluJb SINE Alu 0 312 1 185 237 51 17 chr2 162667831 162667890 -90588693 + L2 LINE L2 3159 3219 -94 372 36 72 24 chr2 162668883 162668966 -90587617 + (TTTA)n Simple_repeat Simple_repeat 2 88 0 2690 118 88 101 chr2 162669259 162669793 -90586790 + MER1A DNA MER1_type 1 527 0 1659 138 34 8 chr2 162670254 162670546 -90586037 + AluJb SINE Alu 9 307 0 591 278 114 11 chr2 162671977 162672250 -90584333 - L1MC4a LINE L1 -1916 5892 5592 336 64 0 0 chr2 162672421 162672468 -90584115 + (CA)n Simple_repeat Simple_repeat 2 48 0 767 191 92 155 chr2 162672780 162673199 -90583384 - HAL1 LINE L1 -632 1875 1490 1739 160 41 3 chr2 162673199 162673492 -90583091 - AluJb SINE Alu -8 304 1 767 191 92 155 chr2 162673492 162673563 -90583020 - HAL1 LINE L1 -1017 1490 1416 425 215 62 62 chr2 162673577 162673721 -90582862 - HAL1 LINE L1 -1253 1254 1111 2232 120 52 16 chr2 162673752 162674136 -90582447 - L1MB3 LINE L1 -2 6181 5784 1373 153 52 0 chr2 162674136 162674384 -90582199 - MER2 DNA MER2_type -2 343 83 649 189 5 120 chr2 162674386 162674486 -90582097 - FRAM SINE Alu -136 40 99 2108 98 7 43 chr2 162674486 162674791 -90581792 + AluSx SINE Alu 1 294 -18 649 189 5 120 chr2 162674791 162674881 -90581702 - FRAM SINE Alu -76 100 1 529 174 0 31 chr2 162674889 162674987 -90581596 - MER2 DNA MER2_type -250 95 1 492 181 21 0 chr2 162674987 162675081 -90581502 - L1MB3 LINE L1 -400 5783 5688 1670 268 95 67 chr2 162675087 162676076 -90580507 - HAL1 LINE L1 -1410 1097 81 1612 177 6 54 chr2 162676497 162676814 -90579769 + AluJb SINE Alu 1 302 -10 340 234 234 19 chr2 162678259 162678413 -90578170 + MIR SINE MIR 11 197 -65 549 248 0 0 chr2 162680032 162680141 -90576442 + MER58A DNA MER1_type 28 136 0 563 187 6 26 chr2 162680239 162680376 -90576207 + MER58B DNA MER1_type 87 340 -1 732 325 32 14 chr2 162680401 162680746 -90575837 + L2 LINE L2 201 551 -2763 853 169 0 0 chr2 162680756 162680880 -90575703 - FLAM_C SINE Alu -19 124 1 1620 329 55 32 chr2 162680883 162681987 -90574596 + L2 LINE L2 542 1671 -1643 279 276 112 65 chr2 162682112 162682344 -90574239 + L2 LINE L2 3013 3255 -58 216 97 0 0 chr2 162682380 162682411 -90574172 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 423 0 0 0 chr2 162682414 162682461 -90574122 + (TG)n Simple_repeat Simple_repeat 2 48 0 213 300 0 0 chr2 162682760 162682830 -90573753 + (TA)n Simple_repeat Simple_repeat 1 70 0 244 219 7 124 chr2 162683616 162683753 -90572830 - MLT1L LTR MaLR -305 310 190 276 263 0 26 chr2 162684650 162684726 -90571857 + GA-rich Low_complexity Low_complexity 2 75 0 21 0 0 0 chr2 162685576 162685597 -90570986 + AT_rich Low_complexity Low_complexity 1 21 0 2455 80 0 6 chr2 162685762 162686073 -90570510 + AluSq SINE Alu 1 309 -4 226 222 83 14 chr2 162686442 162686514 -90570069 - MLT1K LTR MaLR -370 218 142 617 240 33 0 chr2 162686841 162686962 -90569621 + AluJ SINE Alu 2 126 -186 5944 77 20 57 chr2 162687078 162687977 -90568606 + SVA Other Other 1 866 -520 6285 82 18 60 chr2 162687995 162689586 -90566997 + SVA Other Other 433 1386 0 41334 69 8 4 chr2 162689682 162695816 -90560767 - L1PA5 LINE L1 -1 6153 1 213 258 0 0 chr2 162695926 162695992 -90560591 + GA-rich Low_complexity Low_complexity 3 68 0 256 212 123 103 chr2 162696354 162696378 -90560205 - HAL1 LINE L1 -6 2501 2479 1929 187 19 8 chr2 162696378 162696737 -90559846 + MLT1A1 LTR MaLR 1 363 -2 256 212 123 103 chr2 162696737 162696858 -90559725 - HAL1 LINE L1 -28 2479 2353 1007 178 0 6 chr2 162696869 162697032 -90559551 + AluJ SINE Alu 134 295 -17 309 200 39 117 chr2 162697149 162697354 -90559229 - HAL1 LINE L1 -335 2172 1984 5812 136 22 8 chr2 162697372 162698450 -90558133 - L1PA16 LINE L1 -9 6157 5069 279 0 0 0 chr2 162698568 162698599 -90557984 + (T)n Simple_repeat Simple_repeat 1 31 0 664 271 127 70 chr2 162698666 162699643 -90556940 - HAL1 LINE L1 -695 1812 780 323 346 165 19 chr2 162699671 162699791 -90556792 - HAL1 LINE L1 -1708 799 698 1742 200 67 48 chr2 162699791 162700287 -90556296 - MLT1D LTR MaLR 0 505 1 323 346 165 19 chr2 162700287 162700475 -90556108 - HAL1 LINE L1 -1809 698 446 349 275 53 63 chr2 162700581 162700865 -90555718 - HAL1 LINE L1 -2087 420 52 2348 95 0 25 chr2 162701076 162701392 -90555191 + AluSc SINE Alu 1 308 -1 530 293 167 21 chr2 162701499 162701834 -90554749 - HAL1b LINE L1 -633 715 332 24 53 0 0 chr2 162703738 162703776 -90552807 + AT_rich Low_complexity Low_complexity 1 38 0 655 285 149 13 chr2 162703936 162704164 -90552419 - MIR SINE MIR -3 259 1 333 274 0 0 chr2 162705363 162705436 -90551147 + MIR3 SINE MIR 98 170 -38 697 116 132 0 chr2 162705682 162705803 -90550780 + AluJb SINE Alu 1 137 -175 653 139 9 0 chr2 162706534 162706649 -90549934 + L1MB8 LINE L1 6060 6175 -3 239 298 122 61 chr2 162706654 162706785 -90549798 - MER5A DNA MER1_type -15 174 36 244 336 112 12 chr2 162707071 162707252 -90549331 - MIR3 SINE MIR -23 185 11 322 266 164 57 chr2 162707599 162707862 -90548721 + L2 LINE L2 575 865 -2449 2201 129 0 0 chr2 162708208 162708503 -90548080 - AluSx SINE Alu -17 295 1 2149 142 0 0 chr2 162708983 162709278 -90547305 + AluSx SINE Alu 1 295 -17 451 110 70 0 chr2 162709361 162709461 -90547122 - Charlie5 DNA MER1_type -68 2544 2438 2242 111 3 23 chr2 162709462 162709815 -90546768 + L1MB3 LINE L1 5835 6180 -3 2147 132 0 0 chr2 162709839 162710135 -90546448 + AluSx SINE Alu 1 296 -16 229 135 39 0 chr2 162710135 162710187 -90546396 + (TA)n Simple_repeat Simple_repeat 1 54 0 244 109 18 18 chr2 162710264 162710319 -90546264 + (TA)n Simple_repeat Simple_repeat 1 55 0 29 28 0 0 chr2 162710325 162710361 -90546222 + AT_rich Low_complexity Low_complexity 1 36 0 558 354 47 71 chr2 162710597 162711054 -90545529 + L2 LINE L2 2655 3103 -169 698 205 8 0 chr2 162711054 162711181 -90545402 - FLAM_C SINE Alu -5 128 1 558 354 47 71 chr2 162711181 162711347 -90545236 + L2 LINE L2 3103 3272 0 185 327 220 24 chr2 162711630 162711798 -90544785 + L2 LINE L2 1884 2084 -1230 477 240 31 8 chr2 162711959 162712088 -90544495 - MLT1J LTR MaLR -6 505 374 356 262 19 10 chr2 162712150 162712253 -90544330 + MLT1J LTR MaLR 118 221 -290 1880 151 0 29 chr2 162712258 162712399 -90544184 + AluJb SINE Alu 1 145 -167 2241 98 3 7 chr2 162712399 162712705 -90543878 + AluSx SINE Alu 1 305 -7 1880 151 0 29 chr2 162712705 162712874 -90543709 + AluJb SINE Alu 145 302 -10 224 355 36 9 chr2 162713007 162713117 -90543466 + MIR SINE MIR 22 134 -128 1173 125 72 168 chr2 162713346 162713721 -90542862 - MER1B DNA MER1_type 0 339 1 1508 77 26 0 chr2 162713853 162714047 -90542536 - AluSg/x SINE Alu -7 305 107 295 242 43 17 chr2 162714047 162714165 -90542418 - L1MB8 LINE L1 -37 6137 6019 1181 194 5 0 chr2 162714491 162714702 -90541881 - AluJb SINE Alu 0 312 101 337 208 0 14 chr2 162714702 162714774 -90541809 - MSTD LTR MaLR -325 71 1 2078 133 0 29 chr2 162715219 162715534 -90541049 - AluSx SINE Alu -6 306 1 701 182 126 6 chr2 162715867 162716026 -90540557 + MER5B DNA MER1_type 1 178 0 358 119 34 0 chr2 162716071 162716130 -90540453 - MER5B DNA MER1_type 0 178 118 428 131 93 5 chr2 162716131 162716313 -90540270 + L1MA9 LINE L1 5994 6288 -24 273 57 0 0 chr2 162716313 162716348 -90540235 + (TA)n Simple_repeat Simple_repeat 1 35 0 606 178 22 52 chr2 162716348 162716483 -90540100 - MER5B DNA MER1_type -46 132 2 2140 229 25 25 chr2 162716644 162717198 -90539385 - MLT2B3 LTR ERVL 0 554 1 2583 107 20 67 chr2 162717320 162717386 -90539197 - MSTA LTR MaLR 0 428 360 2302 105 0 0 chr2 162717386 162717692 -90538891 - AluSx SINE Alu -6 306 1 2583 107 20 67 chr2 162717692 162718074 -90538509 - MSTA LTR MaLR -68 360 1 22 0 0 0 chr2 162720098 162720120 -90536463 + AT_rich Low_complexity Low_complexity 1 22 0 557 69 0 0 chr2 162720193 162720265 -90536318 + tRNA-Ala-GCG tRNA tRNA 1 72 -3 637 0 0 0 chr2 162720571 162720642 -90535941 - tRNA-Gly-GGC tRNA tRNA -3 71 1 773 174 75 37 chr2 162722038 162722073 -90534510 - AluJo SINE Alu -145 167 135 303 71 0 0 chr2 162722073 162722115 -90534468 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 773 174 75 37 chr2 162722115 162722240 -90534343 - AluJo SINE Alu -177 135 1 648 97 0 0 chr2 162722466 162722559 -90534024 + AluJb SINE Alu 210 302 -10 256 236 18 0 chr2 162722829 162722884 -90533699 + MLT1L LTR MaLR 339 394 -221 245 244 58 12 chr2 162722946 162723032 -90533551 + MLT1L LTR MaLR 515 604 -11 225 0 0 0 chr2 162723037 162723062 -90533521 + (TG)n Simple_repeat Simple_repeat 1 25 0 225 272 53 44 chr2 162723381 162723495 -90533088 + MLT1K LTR MaLR 409 523 -65 1623 168 3 68 chr2 162723510 162723819 -90532764 + AluJo SINE Alu 1 289 -23 1892 127 13 54 chr2 162723984 162724298 -90532285 + AluSx SINE Alu 1 301 -11 221 228 35 18 chr2 162725977 162726034 -90530549 + CT-rich Low_complexity Low_complexity 3 60 0 2059 90 4 4 chr2 162726355 162726622 -90529961 + AluSx SINE Alu 1 267 -45 24 0 0 0 chr2 162726713 162726737 -90529846 + AT_rich Low_complexity Low_complexity 1 24 0 679 289 57 0 chr2 162727055 162727266 -90529317 - L1MC/D LINE L1 -2023 5785 5563 2036 149 3 3 chr2 162727371 162727680 -90528903 - AluJb SINE Alu -3 309 1 219 118 0 0 chr2 162727832 162727866 -90528717 + MER5A DNA MER1_type 40 73 -116 1429 157 90 47 chr2 162727869 162728168 -90528415 + AluJo SINE Alu 1 312 0 1610 173 145 5 chr2 162728286 162728673 -90527910 + MLT1C LTR MaLR 27 467 0 1641 200 3 13 chr2 162728841 162729146 -90527437 + AluJo SINE Alu 2 303 -9 1056 221 173 4 chr2 162729232 162729486 -90527097 + AluSx SINE Alu 1 297 -5 426 267 10 0 chr2 162729571 162729672 -90526911 - U13 snRNA snRNA -2 102 1 520 165 0 0 chr2 162729969 162730048 -90526535 - FLAM SINE Alu -16 127 49 243 306 222 9 chr2 162730552 162730660 -90525923 - MIR SINE MIR -119 143 13 2029 119 0 11 chr2 162730737 162731015 -90525568 - AluSq SINE Alu -12 301 27 2153 116 7 10 chr2 162731579 162731881 -90524702 + AluSx SINE Alu 1 301 -11 905 265 26 13 chr2 162731882 162732112 -90524471 + MIR SINE MIR 26 258 -4 1986 141 0 0 chr2 162732253 162732523 -90524060 + AluJb SINE Alu 12 281 -31 2180 117 0 13 chr2 162732727 162733043 -90523540 + AluSx SINE Alu 1 312 0 2144 111 3 0 chr2 162733050 162733347 -90523236 + AluSp SINE Alu 1 298 -15 182 267 44 0 chr2 162733998 162734043 -90522540 + L3 LINE CR1 1524 1570 -7 1120 291 16 118 chr2 162734438 162734581 -90522002 - L1PB2 LINE L1 -41 6110 5954 2346 85 0 0 chr2 162734581 162734886 -90521697 - AluY SINE Alu -6 305 1 1120 291 16 118 chr2 162734886 162735008 -90521575 - L1PB2 LINE L1 -197 5954 5821 2247 117 3 0 chr2 162735008 162735307 -90521276 + AluSp SINE Alu 1 300 -13 1553 22 0 0 chr2 162735307 162735485 -90521098 + AluYa5 SINE Alu 134 311 0 1120 291 16 118 chr2 162735485 162735601 -90520982 - L1PB2 LINE L1 -329 5822 5775 210 71 0 0 chr2 162735601 162735629 -90520954 + (TA)n Simple_repeat Simple_repeat 1 28 0 1120 291 16 118 chr2 162735629 162735684 -90520899 - L1PB2 LINE L1 -376 5775 5716 1595 190 0 50 chr2 162735783 162736083 -90520500 - AluJb SINE Alu -13 299 15 687 211 43 78 chr2 162736097 162736329 -90520254 - L2 LINE L2 -15 3298 3075 27 0 0 0 chr2 162736396 162736423 -90520160 + AT_rich Low_complexity Low_complexity 1 27 0 210 351 98 69 chr2 162736492 162736666 -90519917 + L2 LINE L2 3092 3270 -2 206 171 0 0 chr2 162736938 162736979 -90519604 - L2 LINE L2 0 3313 3273 987 184 25 0 chr2 162737169 162737332 -90519251 + FRAM SINE Alu 1 165 -11 2219 117 0 0 chr2 162737369 162737669 -90518914 + AluSg SINE Alu 1 300 -10 1195 137 22 0 chr2 162737671 162737854 -90518729 + AluSg/x SINE Alu 126 312 0 725 163 105 14 chr2 162738006 162738269 -90518314 - LTR49 LTR ERV1 -4 591 310 711 204 236 14 chr2 162738263 162738479 -90518104 - LTR29 LTR ERV1 -347 275 12 * 2480 87 3 0 chr2 162738483 162738795 -90517788 - AluSp SINE Alu 0 313 1 2050 127 30 3 chr2 162739608 162739907 -90516676 - AluSc SINE Alu -2 307 1 474 250 179 0 chr2 162740456 162740596 -90515987 - MER5A DNA MER1_type -16 173 9 230 271 14 14 chr2 162740628 162740698 -90515885 + MER5A DNA MER1_type 15 84 -105 1609 183 4 7 chr2 162741280 162741554 -90515029 + AluJo SINE Alu 1 273 -39 347 261 52 96 chr2 162741554 162741632 -90514951 + L1ME LINE L1 5593 5673 -448 404 235 0 10 chr2 162741632 162741734 -90514849 + U13 snRNA snRNA 2 102 -2 347 261 52 96 chr2 162741734 162741885 -90514698 + L1ME LINE L1 5673 5812 -309 2184 107 13 7 chr2 162741885 162742194 -90514389 + AluY SINE Alu 1 311 0 27 49 0 0 chr2 162742289 162742330 -90514253 + AT_rich Low_complexity Low_complexity 1 41 0 228 225 225 0 chr2 162742333 162742404 -90514179 + L2 LINE L2 3227 3313 0 709 286 55 5 chr2 162742422 162742639 -90513944 - MIR SINE MIR -16 246 19 375 60 0 0 chr2 162742697 162742747 -90513836 - MADE1 DNA Mariner 0 80 31 456 250 8 8 chr2 162744164 162744284 -90512299 + MER102b DNA MER1_type 107 226 -115 1373 196 96 24 chr2 162744522 162744813 -90511770 - AluJo SINE Alu 0 312 1 286 288 109 18 chr2 162744853 162745127 -90511456 - L1MC4 LINE L1 -389 7653 7355 1885 133 45 58 chr2 162745309 162745360 -90511223 - THE1C LTR MaLR 0 375 325 2488 50 0 3 chr2 162745360 162745659 -90510924 - AluY SINE Alu -13 298 1 1885 133 45 58 chr2 162745659 162745983 -90510600 - THE1C LTR MaLR -50 325 5 279 289 0 13 chr2 162745983 162746059 -90510524 + L2 LINE L2 3236 3310 -3 950 320 101 3 chr2 162746328 162746716 -90509867 - LTR16A LTR ERVL 0 450 25 1671 201 78 64 chr2 162747120 162747618 -90508965 - MLT1D LTR MaLR 0 505 1 22 35 0 0 chr2 162749092 162749121 -90507462 + AT_rich Low_complexity Low_complexity 1 29 0 357 274 57 94 chr2 162749683 162749895 -90506688 + MIR SINE MIR 57 260 -2 2347 96 0 3 chr2 162751322 162751624 -90504959 - AluSx SINE Alu -11 301 1 1847 148 41 58 chr2 162751691 162752056 -90504527 - L1PA16 LINE L1 -3 6163 5805 5206 77 48 5 chr2 162752477 162753139 -90503444 + LTR8 LTR ERV1 1 691 0 279 238 62 25 chr2 162753220 162753300 -90503283 - L2 LINE L2 0 3272 3190 2217 120 0 0 chr2 162753538 162753838 -90502745 - AluSg SINE Alu -10 300 1 1623 106 64 7 chr2 162753850 162754132 -90502451 - LTR23 LTR ERV1 -139 298 1 215 260 65 107 chr2 162754150 162754187 -90502396 + MER5B DNA MER1_type 17 54 -124 790 189 107 18 chr2 162754187 162754356 -90502227 - MER5A DNA MER1_type -2 187 4 215 260 65 107 chr2 162754356 162754487 -90502096 + MER5B DNA MER1_type 54 178 0 25 0 0 0 chr2 162755763 162755788 -90500795 + GC_rich Low_complexity Low_complexity 1 25 0 403 318 19 19 chr2 162757390 162757544 -90499039 + L2 LINE L2 3158 3311 -2 226 339 0 0 chr2 162757545 162757610 -90498973 + L2 LINE L2 3247 3311 -2 185 222 0 0 chr2 162757695 162757731 -90498852 + MIR SINE MIR 117 152 -110 1319 139 10 29 chr2 162758732 162758940 -90497643 + AluJb SINE Alu 1 204 -108 294 50 0 0 chr2 162758950 162758990 -90497593 + (A)n Simple_repeat Simple_repeat 1 40 0 2088 112 0 17 chr2 162758999 162759313 -90497270 + AluSx SINE Alu 4 312 0 189 0 0 0 chr2 162759923 162759944 -90496639 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 2858 239 71 32 chr2 162760228 162760706 -90495877 + MER21B LTR ERV1 1 522 -341 1734 183 0 22 chr2 162760706 162761018 -90495565 + AluJb SINE Alu 1 305 -7 2858 239 71 32 chr2 162761018 162761318 -90495265 + MER21B LTR ERV1 522 809 -54 1916 130 39 0 chr2 162761976 162762260 -90494323 + AluJb SINE Alu 13 307 -5 21 57 0 0 chr2 162763014 162763049 -90493534 + AT_rich Low_complexity Low_complexity 1 35 0 230 213 163 25 chr2 162763455 162763535 -90493048 + MIR3 SINE MIR 84 174 -34 1981 132 7 0 chr2 162763868 162764156 -90492427 + AluSx SINE Alu 2 291 -21 180 0 0 0 chr2 162764157 162764177 -90492406 + (CA)n Simple_repeat Simple_repeat 2 21 0 839 209 13 0 chr2 162764185 162764338 -90492245 - FRAM SINE Alu -9 167 13 692 320 58 37 chr2 162765217 162765369 -90491214 - MLT1J2 LTR MaLR -118 332 185 2135 111 7 0 chr2 162765369 162765657 -90490926 - AluSx SINE Alu -22 290 1 692 320 58 37 chr2 162765657 162765829 -90490754 - MLT1J2 LTR MaLR -265 185 1 2002 109 69 0 chr2 162765840 162766115 -90490468 - AluSg SINE Alu -16 294 1 1768 180 0 0 chr2 162766600 162766883 -90489700 - AluJo SINE Alu -16 296 14 2143 84 23 23 chr2 162767374 162767673 -90488910 - AluSg1 SINE Alu -10 299 1 575 336 132 16 chr2 162767702 162768034 -90488549 - L2 LINE L2 -68 3204 2812 1619 239 102 26 chr2 162768034 162768503 -90488080 - MLT1D LTR MaLR 0 505 1 575 336 132 16 chr2 162768503 162768608 -90487975 - L2 LINE L2 -460 2812 2721 32 26 0 0 chr2 162768669 162768708 -90487875 + AT_rich Low_complexity Low_complexity 1 39 0 672 170 102 48 chr2 162768711 162768858 -90487725 - MER106B DNA MER1_type -904 155 1 2064 108 14 17 chr2 162768989 162769284 -90487299 + AluSx SINE Alu 1 294 -18 2148 290 141 81 chr2 162769292 162769927 -90486656 - L2 LINE L2 -757 2557 1962 6577 62 34 32 chr2 162769927 162771845 -90484738 - SVA Other Other -520 1383 8 2148 290 141 81 chr2 162771845 162772876 -90483707 - L2 LINE L2 -1352 1962 646 2225 103 0 0 chr2 162772876 162773167 -90483416 + AluSx SINE Alu 21 311 -1 2148 290 141 81 chr2 162773167 162773409 -90483174 - L2 LINE L2 -2668 646 420 798 185 8 0 chr2 162773636 162773766 -90482817 + FLAM_C SINE Alu 1 131 -2 267 254 61 24 chr2 162773880 162774081 -90482502 - L2 LINE L2 -2972 342 70 187 282 51 26 chr2 162774573 162774651 -90481932 + MIR SINE MIR 156 235 -27 196 205 26 0 chr2 162775107 162775146 -90481437 + L2 LINE L2 3273 3312 -1 1925 146 28 0 chr2 162775583 162775870 -90480713 + AluSx SINE Alu 1 295 -17 323 178 313 14 chr2 162777186 162777292 -90479291 - MIR SINE MIR -66 142 3 506 272 58 16 chr2 162778076 162778267 -90478316 - L1ME4a LINE L1 -1 6120 5922 189 0 0 0 chr2 162778268 162778289 -90478294 + (TA)n Simple_repeat Simple_repeat 2 22 0 2283 103 6 16 chr2 162778666 162778978 -90477605 + AluSc SINE Alu 1 309 0 216 250 167 39 chr2 162778979 162779135 -90477448 - MIR3 SINE MIR -31 177 2 726 142 0 0 chr2 162780423 162780529 -90476054 - AluJb SINE Alu -5 307 202 234 328 0 76 chr2 162780529 162780648 -90475935 + L2 LINE L2 2642 2751 -563 1817 154 34 3 chr2 162780648 162780941 -90475642 - AluJo SINE Alu -10 302 1 263 244 256 43 chr2 162780973 162781137 -90475446 + L2 LINE L2 3112 3310 -3 2261 100 0 49 chr2 162781534 162781863 -90474720 - AluSp SINE Alu 0 313 1 847 75 19 0 chr2 162782133 162782240 -90474343 + L1PA5 LINE L1 6042 6150 -4 335 276 126 8 chr2 162782543 162782670 -90473913 + L2 LINE L2 3167 3308 -5 325 346 80 0 chr2 162782784 162782946 -90473637 - MIR3 SINE MIR -1 207 33 2298 102 3 0 chr2 162784109 162784412 -90472171 - AluSq SINE Alu -9 304 1 1607 171 33 23 chr2 162784611 162784910 -90471673 - AluJo SINE Alu 0 312 11 3792 109 47 26 chr2 162787961 162788423 -90468160 - L1MA3 LINE L1 0 6305 5825 2200 96 0 23 chr2 162788423 162788726 -90467857 - AluSx SINE Alu -16 296 1 3792 109 47 26 chr2 162788726 162788875 -90467708 - L1MA3 LINE L1 -480 5825 5681 1138 96 191 0 chr2 162789152 162789340 -90467243 - MER41B LTR ERV1 0 635 412 478 35 0 0 chr2 162789334 162789392 -90467191 - MER41A LTR ERV1 -496 58 1 * 1783 185 3 13 chr2 162789446 162789759 -90466824 - AluJo SINE Alu -2 310 1 218 349 107 35 chr2 162790219 162790388 -90466195 + L2 LINE L2 2268 2448 -866 2229 114 0 13 chr2 162791575 162791883 -90464700 - AluSx SINE Alu -8 304 1 334 314 189 12 chr2 162792123 162792292 -90464291 + MIR SINE MIR 64 262 0 640 156 0 0 chr2 162793302 162793392 -90463191 - FRAM SINE Alu -21 155 66 1063 179 103 83 chr2 162794105 162794395 -90462188 + AluJo SINE Alu 11 306 -6 1187 92 0 0 chr2 162794599 162794751 -90461832 - AluSg/x SINE Alu -21 291 140 340 113 0 0 chr2 162794751 162794802 -90461781 - Alu SINE Alu -258 44 1 1900 161 0 3 chr2 162796410 162796695 -90459888 + AluJb SINE Alu 1 284 -28 412 143 0 0 chr2 162796916 162796986 -90459597 - L1MA5A LINE L1 -3 6294 6225 204 167 0 24 chr2 162797763 162797805 -90458778 + A-rich Low_complexity Low_complexity 2 42 0 1177 92 0 7 chr2 162800037 162800190 -90456393 - AluSq SINE Alu -10 303 152 3578 122 7 33 chr2 162800428 162800911 -90455672 - L1MA5 LINE L1 -1 6299 5834 778 114 38 30 chr2 162800911 162801042 -90455541 - FLAM_C SINE Alu -1 132 1 3578 122 7 33 chr2 162801042 162801164 -90455419 - L1MA5 LINE L1 -466 5834 5710 478 284 104 6 chr2 162801164 162801347 -90455236 + MIR SINE MIR 61 261 -1 201 139 0 0 chr2 162802377 162802420 -90454163 + (A)n Simple_repeat Simple_repeat 1 43 0 262 264 91 50 chr2 162802579 162802700 -90453883 + MIR SINE MIR 121 246 -16 216 0 0 0 chr2 162803250 162803274 -90453309 + (T)n Simple_repeat Simple_repeat 1 24 0 2071 86 0 7 chr2 162803406 162803686 -90452897 - AluSx SINE Alu -21 291 14 1323 135 10 29 chr2 162804705 162804913 -90451670 + AluJb SINE Alu 1 204 -108 324 0 0 0 chr2 162804923 162804959 -90451624 + (A)n Simple_repeat Simple_repeat 1 36 0 1254 211 7 21 chr2 162804969 162805258 -90451325 + AluSq SINE Alu 4 288 -25 330 26 0 0 chr2 162805258 162805297 -90451286 + (TTAA)n Simple_repeat Simple_repeat 1 39 0 1609 111 0 0 chr2 162805480 162805711 -90450872 + AluSg/x SINE Alu 74 304 0 1746 133 71 12 chr2 162805735 162806057 -90450526 - L1MA9 LINE L1 -269 6043 5703 539 321 59 0 chr2 162806414 162806601 -90449982 - MLT1J2 LTR MaLR 0 450 253 189 250 33 33 chr2 162807178 162807238 -90449345 - MIR SINE MIR -92 116 57 1865 141 3 30 chr2 162807871 162808176 -90448407 + AluSq SINE Alu 1 297 -16 201 289 36 60 chr2 162808344 162808427 -90448156 + MIR SINE MIR 3 83 -125 352 295 29 29 chr2 162809946 162810085 -90446498 - MER102b DNA MER1_type 0 341 203 658 173 8 36 chr2 162810536 162810790 -90445793 + CT-rich Low_complexity Low_complexity 1 247 0 25 51 0 0 chr2 162811233 162811272 -90445311 + AT_rich Low_complexity Low_complexity 1 39 0 787 267 52 13 chr2 162811473 162811705 -90444878 + MIR SINE MIR 2 242 -20 273 161 12 99 chr2 162811741 162811822 -90444761 - L1ME1 LINE L1 -7 6159 6086 2333 226 38 50 chr2 162811822 162812088 -90444495 - L1ME1 LINE L1 -31 6135 5867 967 224 67 0 chr2 162812088 162812298 -90444285 - MER58A DNA MER1_type 0 224 1 2333 226 38 50 chr2 162812298 162812586 -90443997 - L1ME1 LINE L1 -299 5867 5588 2176 102 3 0 chr2 162812586 162812879 -90443704 + AluSg SINE Alu 1 294 -16 2333 226 38 50 chr2 162812879 162812982 -90443601 - L1ME1 LINE L1 -578 5588 5485 2033 125 34 0 chr2 162812993 162813290 -90443293 - AluSx SINE Alu -5 307 1 195 42 0 0 chr2 162813290 162813314 -90443269 + (T)n Simple_repeat Simple_repeat 1 24 0 898 343 89 21 chr2 162813378 162814077 -90442506 - L2 LINE L2 -559 2755 2010 312 27 0 0 chr2 162814768 162814805 -90441778 + (TG)n Simple_repeat Simple_repeat 2 38 0 196 250 76 33 chr2 162815215 162815307 -90441276 - MIR SINE MIR -109 153 58 1585 191 0 17 chr2 162815911 162816205 -90440378 + AluJb SINE Alu 1 289 -23 1728 60 21 0 chr2 162817074 162817307 -90439276 - L1PA10 LINE L1 0 6168 5931 30 27 0 0 chr2 162817579 162817616 -90438967 + AT_rich Low_complexity Low_complexity 1 37 0 496 280 56 60 chr2 162817933 162818183 -90438400 + MIR SINE MIR 14 262 0 237 340 58 10 chr2 162819023 162819126 -90437457 - L2 LINE L2 -13 3259 3152 22 0 0 0 chr2 162821138 162821160 -90435423 + AT_rich Low_complexity Low_complexity 1 22 0 540 317 6 24 chr2 162822192 162822359 -90434224 + MIR SINE MIR 2 165 -97 231 218 0 0 chr2 162822943 162822998 -90433585 + (TATG)n Simple_repeat Simple_repeat 2 56 0 327 324 146 9 chr2 162823021 162823234 -90433349 + L1M4 LINE L1 4996 5237 -909 180 0 0 0 chr2 162823271 162823291 -90433292 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1662 189 4 0 chr2 162823293 162823574 -90433009 - AluJo SINE Alu -30 282 1 799 225 109 29 chr2 162825461 162825845 -90430738 + HAL1b LINE L1 1191 1331 -17 21 0 0 0 chr2 162827752 162827773 -90428810 + AT_rich Low_complexity Low_complexity 1 21 0 2087 110 24 3 chr2 162827865 162828156 -90428427 - AluSx SINE Alu -15 297 1 1723 173 16 19 chr2 162828158 162828471 -90428112 - AluJb SINE Alu 0 312 1 457 232 199 49 chr2 162828913 162829344 -90427239 - MLT1F LTR MaLR -27 515 1 2307 94 0 28 chr2 162830611 162830930 -90425653 - AluSx SINE Alu -1 311 2 271 23 45 23 chr2 162831067 162831111 -90425472 + (TTTC)n Simple_repeat Simple_repeat 2 46 0 210 292 44 44 chr2 162832512 162832625 -90423958 + MIR SINE MIR 100 212 -50 421 227 220 33 chr2 162833815 162833965 -90422618 - MER5B DNA MER1_type 0 178 1 1369 176 151 4 chr2 162835979 162836251 -90420332 + AluJb SINE Alu 1 312 0 22 35 0 0 chr2 162836517 162836546 -90420037 + AT_rich Low_complexity Low_complexity 1 29 0 255 37 19 111 chr2 162837149 162837203 -90419380 - L1MB5 LINE L1 -8 6166 6118 1658 185 0 20 chr2 162837299 162837591 -90418992 - AluJo SINE Alu -24 288 3 717 88 193 0 chr2 162837992 162838106 -90418477 - AluJb SINE Alu -176 136 1 22 35 0 0 chr2 162838694 162838723 -90417860 + AT_rich Low_complexity Low_complexity 1 29 0 309 326 0 0 chr2 162839813 162839908 -90416675 + Charlie7 DNA MER1_type 7 101 -2511 283 125 25 75 chr2 162839943 162840023 -90416560 + Charlie7 DNA MER1_type 2485 2560 -52 1168 182 91 59 chr2 162840528 162841205 -90415378 - LTR1B LTR ERV1 0 785 1 1794 152 3 3 chr2 162841370 162841728 -90414855 - AluSx SINE Alu 0 358 1 742 300 38 6 chr2 162841765 162842086 -90414497 + L1ME3A LINE L1 5536 5875 -295 303 182 0 0 chr2 162843386 162843441 -90413142 - L2 LINE L2 0 3313 3259 2483 157 12 2 chr2 162843762 162844190 -90412393 - L1MC1 LINE L1 0 6333 5902 265 201 182 88 chr2 162844243 162844504 -90412079 - L1MC5 LINE L1 -16 7945 7649 450 0 0 0 chr2 162844513 162844563 -90412020 + (TAGA)n Simple_repeat Simple_repeat 1 50 0 834 143 0 15 chr2 162844563 162844686 -90411897 - FLAM_C SINE Alu -179 123 1 265 201 182 88 chr2 162844686 162844732 -90411851 - L1MC5 LINE L1 -312 7649 7609 874 179 11 28 chr2 162844836 162845015 -90411568 - L1PB4 LINE L1 -5 6151 5976 1029 233 126 59 chr2 162845121 162845598 -90410985 - MLT1H1 LTR MaLR -10 545 38 1644 213 54 88 chr2 162845658 162846442 -90410141 - L1MC5 LINE L1 -656 7305 6542 309 306 145 16 chr2 162846512 162846760 -90409823 - L1MC4a LINE L1 -1480 6328 6049 207 0 0 0 chr2 162849262 162849285 -90407298 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 11651 22 4 0 chr2 162849285 162851673 -90404910 - L1PA3 LINE L1 -5 6150 3753 633 226 0 0 chr2 162851695 162851828 -90404755 - FLAM_A SINE Alu -4 138 6 28 0 0 0 chr2 162852806 162852834 -90403749 + AT_rich Low_complexity Low_complexity 1 28 0 1316 219 19 35 chr2 162852838 162853149 -90403434 - AluJo SINE Alu -6 306 1 3907 164 82 7 chr2 162854582 162855350 -90401233 - LTR1B LTR ERV1 0 826 1 191 303 84 17 chr2 162855759 162855878 -90400705 - L2 LINE L2 -212 3060 2934 646 152 5 63 chr2 162856118 162856309 -90400274 + GA-rich Low_complexity Low_complexity 1 180 0 197 32 0 32 chr2 162856404 162856435 -90400148 + (TTTTG)n Simple_repeat Simple_repeat 4 33 0 2426 73 0 3 chr2 162859382 162859682 -90396901 + AluY SINE Alu 1 299 -12 194 297 100 42 chr2 162860053 162860242 -90396341 - MIR SINE MIR -50 212 21 254 320 105 7 chr2 162861063 162861216 -90395367 - LTR67 LTR ERVL -240 317 150 303 330 184 5 chr2 162861878 162862063 -90394520 - MIR SINE MIR 0 262 45 286 238 40 79 chr2 162862254 162862355 -90394228 + L2 LINE L2 3202 3298 -15 201 39 0 0 chr2 162862664 162862690 -90393893 + (T)n Simple_repeat Simple_repeat 1 26 0 349 293 96 52 chr2 162863626 162863875 -90392708 + L2 LINE L2 3045 3304 -9 185 356 92 0 chr2 162864157 162864244 -90392339 - L2 LINE L2 -4 3268 3174 297 312 0 0 chr2 162864285 162864362 -90392221 + L2 LINE L2 3178 3254 -18 541 232 158 65 chr2 162865012 162865335 -90391248 - MLT1H LTR MaLR -184 365 13 190 341 57 16 chr2 162865581 162865704 -90390879 - MIR SINE MIR -113 149 22 224 200 15 0 chr2 162865940 162866005 -90390578 + (CA)n Simple_repeat Simple_repeat 1 66 0 269 297 66 55 chr2 162867908 162867999 -90388584 + L2 LINE L2 3148 3239 -33 193 294 61 136 chr2 162868089 162868303 -90388280 - L2 LINE L2 -184 3088 2891 22 0 0 0 chr2 162870905 162870927 -90385656 + AT_rich Low_complexity Low_complexity 1 22 0 376 233 68 8 chr2 162872099 162872232 -90384351 + L1MC5 LINE L1 7772 7912 -49 670 303 111 3 chr2 162872403 162872746 -90383837 + L1ME4a LINE L1 5669 6048 -73 213 395 12 0 chr2 162873502 162873583 -90383000 + MIR SINE MIR 64 145 -63 183 184 149 69 chr2 162873688 162873738 -90382845 + MIR SINE MIR 80 125 -137 2139 102 41 0 chr2 162873738 162874031 -90382552 - AluSx SINE Alu -7 305 1 183 184 149 69 chr2 162874031 162874067 -90382516 + MIR SINE MIR 125 173 -89 417 204 11 0 chr2 162874090 162874178 -90382405 + L2 LINE L2 3221 3309 -4 23 68 0 0 chr2 162876236 162876280 -90380303 + AT_rich Low_complexity Low_complexity 1 44 0 26 30 0 0 chr2 162876901 162876934 -90379649 + AT_rich Low_complexity Low_complexity 1 33 0 431 326 131 26 chr2 162879039 162879422 -90377161 + L2 LINE L2 2367 2789 -525 1998 103 0 67 chr2 162879436 162879759 -90376824 - AluSg SINE Alu 0 303 1 592 279 71 50 chr2 162881742 162881884 -90374699 - MIR SINE MIR -15 247 97 2415 85 0 0 chr2 162881884 162882189 -90374394 - AluSg SINE Alu -5 305 1 592 279 71 50 chr2 162882189 162882286 -90374297 - MIR SINE MIR -165 97 3 922 230 0 19 chr2 162884660 162884873 -90371710 - MER3 DNA MER1_type 0 209 1 322 267 102 40 chr2 162884973 162885149 -90371434 - MLT1L LTR MaLR -66 549 363 22 0 0 0 chr2 162885621 162885643 -90370940 + AT_rich Low_complexity Low_complexity 1 22 0 448 328 16 8 chr2 162886784 162886906 -90369677 + MER91A DNA MER1_type 2 124 -72 4897 163 39 17 chr2 162887041 162888276 -90368307 - L1MB3 LINE L1 -2 6181 4918 379 307 31 75 chr2 162888919 162889173 -90367410 + MIR SINE MIR 1 243 -19 854 146 0 29 chr2 162889834 162889971 -90366612 - FLAM_C SINE Alu 0 133 1 21 0 0 0 chr2 162891210 162891231 -90365352 + AT_rich Low_complexity Low_complexity 1 21 0 305 159 16 0 chr2 162892583 162892646 -90363937 + (CA)n Simple_repeat Simple_repeat 1 64 0 912 253 45 8 chr2 162892734 162892999 -90363584 + L2 LINE L2 1782 2056 -1258 440 193 56 204 chr2 162893000 162893373 -90363210 + L2 LINE L2 2373 2690 -624 727 235 86 48 chr2 162893376 162893644 -90362939 - L2 LINE L2 -1024 2290 2013 1080 186 11 11 chr2 162893650 162893838 -90362745 - MLT1A1 LTR MaLR 0 365 178 328 287 59 20 chr2 162894010 162894171 -90362412 - MIR SINE MIR -61 147 20 439 233 60 20 chr2 162894612 162894762 -90361821 + L3b LINE CR1 1109 1264 -319 306 236 82 18 chr2 162895124 162895234 -90361349 + MER103 DNA DNA 6 122 -44 1350 351 146 43 chr2 162895896 162896235 -90360348 + L3 LINE CR1 45 348 -1229 2050 154 0 10 chr2 162896235 162896546 -90360037 - AluJo SINE Alu -2 310 3 1350 351 146 43 chr2 162896546 162897593 -90358990 + L3 LINE CR1 348 1573 -4 219 114 0 0 chr2 162897857 162897892 -90358691 + (CA)n Simple_repeat Simple_repeat 2 36 0 1660 177 13 30 chr2 162898042 162898341 -90358242 + AluJb SINE Alu 1 294 -18 510 340 68 19 chr2 162898544 162898853 -90357730 - MLT1I LTR MaLR -18 391 68 1218 239 7 0 chr2 162899287 162899563 -90357020 + L1ME1 LINE L1 5800 6077 -89 2186 110 0 16 chr2 162900157 162900474 -90356109 - AluSx SINE Alu 0 312 1 25 0 0 0 chr2 162901688 162901713 -90354870 + AT_rich Low_complexity Low_complexity 1 25 0 281 209 19 19 chr2 162902756 162902861 -90353722 + (TA)n Simple_repeat Simple_repeat 2 106 0 189 147 0 0 chr2 162905700 162905734 -90350849 + (TC)n Simple_repeat Simple_repeat 2 35 0 201 94 0 0 chr2 162907264 162907296 -90349287 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 22 56 0 0 chr2 162907795 162907831 -90348752 + AT_rich Low_complexity Low_complexity 1 36 0 28 48 0 0 chr2 162915717 162915759 -90340824 + AT_rich Low_complexity Low_complexity 1 42 0 745 162 19 0 chr2 162917672 162917699 -90338884 - L1MA7 LINE L1 -207 6084 6059 617 105 97 24 chr2 162917699 162917823 -90338760 - L1MA7 LINE L1 0 6291 6159 745 162 19 0 chr2 162917823 162917954 -90338629 - L1MA7 LINE L1 -232 6059 5920 279 0 0 0 chr2 162919194 162919225 -90337358 + (TG)n Simple_repeat Simple_repeat 1 31 0 273 29 0 0 chr2 162919224 162919258 -90337325 + (GA)n Simple_repeat Simple_repeat 1 34 0 * 275 307 84 14 chr2 162919484 162919631 -90336952 - MIR SINE MIR -62 146 41 675 278 21 5 chr2 162920408 162920602 -90335981 - MIR SINE MIR -9 253 57 897 118 0 0 chr2 162922097 162922224 -90334359 - FLAM_C SINE Alu -12 131 5 246 250 24 24 chr2 162924173 162924276 -90332307 - L1M LINE L1 -760 5386 5299 327 277 109 15 chr2 162924318 162924520 -90332063 - L1 LINE L1 -944 5202 4982 1945 139 0 33 chr2 162925121 162925424 -90331159 - AluJo SINE Alu -19 293 1 303 310 183 7 chr2 162925711 162925995 -90330588 - L1MC/D LINE L1 -1962 5846 5513 410 336 47 40 chr2 162926339 162926592 -90329991 + L2 LINE L2 2319 2573 -741 813 315 120 33 chr2 162926592 162927112 -90329471 + L2 LINE L2 2727 3307 -6 1089 218 65 22 chr2 162927511 162927832 -90328751 - L1ME3 LINE L1 -20 6142 5808 24 0 0 0 chr2 162928544 162928568 -90328015 + AT_rich Low_complexity Low_complexity 1 24 0 247 269 39 10 chr2 162929756 162929860 -90326723 + L1MC4 LINE L1 6961 7067 -975 338 280 15 23 chr2 162929880 162930012 -90326571 + L1MC5 LINE L1 6961 7091 -870 241 139 28 42 chr2 162930122 162930194 -90326389 + L1MC5 LINE L1 7855 7925 -36 2671 20 7 0 chr2 162930828 162931133 -90325450 + AluYa5 SINE Alu 1 307 -4 255 318 16 0 chr2 162931683 162931812 -90324771 + (TA)n Simple_repeat Simple_repeat 2 132 0 702 211 53 90 chr2 162932034 162932300 -90324283 + MIR SINE MIR 7 262 0 1376 134 5 0 chr2 162932826 162933042 -90323541 - AluJb SINE Alu 0 304 88 24 0 0 0 chr2 162933082 162933106 -90323477 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 162934246 162934267 -90322316 + AT_rich Low_complexity Low_complexity 1 21 0 415 193 134 148 chr2 162934504 162934587 -90321996 + Charlie2 DNA MER1_type 1 84 -2698 1990 141 0 0 chr2 162934587 162934884 -90321699 - AluSx SINE Alu -7 305 9 415 193 134 148 chr2 162934884 162935002 -90321581 + Charlie2 DNA MER1_type 84 199 -2583 1257 178 143 71 chr2 162935116 162935565 -90321018 + Charlie2 DNA MER1_type 2241 2743 -119 616 26 0 0 chr2 162935565 162935641 -90320942 - L1PA6 LINE L1 -3 6151 6076 1257 178 143 71 chr2 162935641 162935771 -90320812 + Charlie2 DNA MER1_type 2743 2862 0 303 394 32 4 chr2 162936780 162937031 -90319552 - L2 LINE L2 -617 2697 2440 320 302 34 40 chr2 162937662 162937811 -90318772 + MIR3 SINE MIR 13 160 -48 806 75 0 0 chr2 162937886 162937992 -90318591 - AluY SINE Alu -1 310 205 4426 103 110 139 chr2 162938009 162939464 -90317119 - pTR5 LTR ERV1 0 2438 743 518 235 37 62 chr2 162939572 162939734 -90316849 + MIR SINE MIR 9 166 -96 977 220 106 46 chr2 162939823 162940105 -90316478 + MLT1A1 LTR MaLR 66 364 -1 261 296 118 53 chr2 162940872 162941024 -90315559 - MIR SINE MIR -37 225 64 522 274 89 24 chr2 162941121 162941289 -90315294 - MIR SINE MIR 0 262 84 2103 133 7 0 chr2 162941518 162941811 -90314772 - AluSx SINE Alu -17 295 1 189 321 19 0 chr2 162941821 162941874 -90314709 + MER5A DNA MER1_type 136 189 0 22 0 0 0 chr2 162942077 162942099 -90314484 + AT_rich Low_complexity Low_complexity 1 22 0 1831 192 39 10 chr2 162942401 162942786 -90313797 + MSTD LTR MaLR 1 396 0 737 165 104 18 chr2 162944325 162944489 -90312094 - MER5B DNA MER1_type 0 178 1 408 343 203 0 chr2 162944580 162944750 -90311833 + L3 LINE CR1 178 312 -1265 441 0 0 0 chr2 162944750 162944799 -90311784 + (TG)n Simple_repeat Simple_repeat 2 50 0 408 343 203 0 chr2 162944799 162944879 -90311704 + L3 LINE CR1 312 479 -1098 391 288 100 46 chr2 162945245 162945408 -90311175 + L3 LINE CR1 647 833 -744 1335 226 125 12 chr2 162945408 162945744 -90310839 - MLT1A2 LTR MaLR 0 374 1 391 288 100 46 chr2 162945744 162945861 -90310722 + L3 LINE CR1 833 942 -635 1196 253 28 52 chr2 162946290 162946690 -90309893 + LTR16A LTR ERVL 51 440 -10 269 291 68 10 chr2 162947047 162947150 -90309433 - MIR3 SINE MIR -1 207 99 1703 173 6 26 chr2 162948228 162948541 -90308042 - AluJb SINE Alu -5 307 1 249 314 93 20 chr2 162948542 162948746 -90307837 - L1MC/D LINE L1 -2045 5763 5545 287 246 29 29 chr2 162951404 162951473 -90305110 - MIR3 SINE MIR -27 181 113 2683 188 12 21 chr2 162951672 162952235 -90304348 - MER74A LTR ERVL 0 558 1 289 222 16 0 chr2 162953632 162953695 -90302888 - MER103 DNA DNA -65 101 38 2260 103 7 0 chr2 162955086 162955387 -90301196 - AluSx SINE Alu -5 307 5 360 0 0 0 chr2 162956000 162956040 -90300543 + (TG)n Simple_repeat Simple_repeat 1 40 0 2236 82 3 14 chr2 162956146 162956437 -90300146 - AluSg SINE Alu -3 307 20 284 239 116 109 chr2 162956660 162956798 -90299785 + MIR SINE MIR 16 154 -108 2169 110 0 0 chr2 162956839 162957121 -90299462 + AluSq SINE Alu 17 298 -15 21 71 0 0 chr2 162957605 162957647 -90298936 + AT_rich Low_complexity Low_complexity 1 42 0 336 257 13 26 chr2 162957708 162957860 -90298723 + (TAA)n Simple_repeat Simple_repeat 2 151 0 240 315 0 0 chr2 162959251 162959340 -90297243 + L1MC4 LINE L1 6615 6703 -1339 180 0 0 0 chr2 162959534 162959554 -90297029 + (TA)n Simple_repeat Simple_repeat 1 20 0 309 161 0 0 chr2 162959565 162959621 -90296962 - L1MC4 LINE L1 -1339 6703 6648 923 125 7 0 chr2 162959624 162959760 -90296823 - AluSg/x SINE Alu -6 306 170 1489 307 88 34 chr2 162960233 162961048 -90295535 + L1MA6 LINE L1 42 900 -6309 14498 198 32 28 chr2 162961078 162962391 -90294192 + L1MA6 LINE L1 1735 3042 -4320 2049 132 3 3 chr2 162962391 162962687 -90293896 + AluSg SINE Alu 3 298 -12 14498 198 32 28 chr2 162962687 162965597 -90290986 + L1MA6 LINE L1 3042 5699 -1663 5939 84 1 13 chr2 162965597 162966386 -90290197 + LTR17 LTR ERV1 1 780 0 14498 198 32 28 chr2 162966386 162968057 -90288526 + L1MA6 LINE L1 5699 7362 0 1403 182 97 3 chr2 162969121 162969429 -90287154 + MER44D DNA MER2_type 1 607 -2 504 142 18 26 chr2 162969626 162969739 -90286844 + CT-rich Low_complexity Low_complexity 4 115 0 1566 183 25 15 chr2 162969763 162970037 -90286546 - AluJb SINE Alu -35 277 1 360 0 0 0 chr2 162971320 162971360 -90285223 + (CA)n Simple_repeat Simple_repeat 2 41 0 333 354 35 20 chr2 162971378 162971576 -90285007 + Charlie8 DNA MER1_type 74 274 -2143 1462 176 49 52 chr2 162971594 162971646 -90284937 - MLT1A2 LTR MaLR -6 368 317 2281 122 0 0 chr2 162971646 162971958 -90284625 + AluSx SINE Alu 1 312 0 1462 176 49 52 chr2 162971958 162972274 -90284309 - MLT1A2 LTR MaLR -57 317 1 185 234 0 78 chr2 162972388 162972452 -90284131 - MIR3 SINE MIR -42 166 108 516 16 0 0 chr2 162973225 162973286 -90283297 + (TCTCC)n Simple_repeat Simple_repeat 1 61 0 24 0 0 0 chr2 162975597 162975621 -90280962 + AT_rich Low_complexity Low_complexity 1 24 0 508 240 47 23 chr2 162975835 162975964 -90280619 + MER5B DNA MER1_type 47 178 0 2111 127 0 0 chr2 162976851 162977173 -90279410 + AluSx SINE Alu 1 322 0 2241 97 3 10 chr2 162977494 162977825 -90278758 + AluSq SINE Alu 1 313 0 277 359 38 28 chr2 162978073 162978179 -90278404 + L2 LINE L2 3158 3264 -8 837 168 0 0 chr2 162979467 162979610 -90276973 - FLAM_C SINE Alu 0 143 1 1811 238 77 81 chr2 162979762 162980389 -90276194 - MLT1E2 LTR MaLR 0 626 1 777 218 0 0 chr2 162980443 162980576 -90276007 - FLAM_A SINE Alu 0 133 1 978 289 84 45 chr2 162980669 162981229 -90275354 + L2 LINE L2 2730 3310 -3 1942 142 56 12 chr2 162981749 162982072 -90274511 + MER1B DNA MER1_type 1 337 0 2398 59 3 3 chr2 162982697 162983003 -90273580 - AluY SINE Alu -5 306 1 227 351 34 87 chr2 162983256 162983612 -90272971 + L2 LINE L2 2927 3263 -9 305 345 75 23 chr2 162984089 162984263 -90272320 - MER5A DNA MER1_type -1 188 6 429 324 119 14 chr2 162985544 162985915 -90270668 - L1ME3A LINE L1 -284 5886 5477 322 278 112 12 chr2 162985986 162986155 -90270428 - L1ME3A LINE L1 -770 5376 5191 4583 160 25 28 chr2 162986163 162987037 -90269546 - L1MC2 LINE L1 -23 6321 5450 2297 217 12 29 chr2 162987037 162987548 -90269035 + MER74A LTR ERVL 1 502 -56 5719 210 37 68 chr2 162987553 162988196 -90268387 - L1MC2 LINE L1 -743 5403 4741 2259 113 0 3 chr2 162988196 162988506 -90268077 - AluSx SINE Alu -3 309 1 5719 210 37 68 chr2 162988506 162988889 -90267694 - L1MC2 LINE L1 -1405 4741 4347 1749 189 0 3 chr2 162988889 162989180 -90267403 - AluJo SINE Alu -22 290 1 5719 210 37 68 chr2 162989180 162990285 -90266298 - L1MC2 LINE L1 -1799 4347 3398 757 188 0 15 chr2 162990286 162990419 -90266164 + AluJo SINE Alu 1 131 -181 275 246 0 0 chr2 162990420 162990489 -90266094 - L1MC2 LINE L1 -2740 3406 3338 256 106 21 0 chr2 162990490 162990537 -90266046 - L1MB4 LINE L1 -6 6174 6127 1878 160 4 0 chr2 162990550 162990831 -90265752 - AluJo SINE Alu -30 282 1 2597 156 19 6 chr2 162990841 162991321 -90265262 - L1MB3 LINE L1 -2 6181 5696 1259 239 51 36 chr2 162991330 162991778 -90264805 - L1 LINE L1 -1348 4798 4344 263 311 102 64 chr2 162991845 162992080 -90264503 + ERVL LTR ERVL 3713 3956 -1808 260 400 75 0 chr2 162992711 162992831 -90263752 + L2 LINE L2 3125 3253 -19 1014 252 118 22 chr2 162994106 162994463 -90262120 + MLT1J2 LTR MaLR 1 391 -59 965 207 0 0 chr2 162995762 162995926 -90260657 + AluJo SINE Alu 137 300 -2 232 280 75 43 chr2 162995927 162996020 -90260563 - L2 LINE L2 -15 3257 3162 323 241 78 84 chr2 162996172 162996338 -90260245 + MIR SINE MIR 31 195 -67 188 370 0 0 chr2 162996531 162996604 -90259979 - MIR SINE MIR -123 139 67 652 133 273 6 chr2 162997815 162997980 -90258603 + MER3 DNA MER1_type 1 209 0 218 105 26 0 chr2 162998942 162998980 -90257603 + (CA)n Simple_repeat Simple_repeat 2 40 0 5043 185 26 19 chr2 162999613 162999681 -90256902 - L1MB2 LINE L1 -3 6168 6102 2442 37 40 7 chr2 162999681 162999977 -90256606 + AluY SINE Alu 1 306 -5 5043 185 26 19 chr2 162999977 163001710 -90254873 - L1MB2 LINE L1 -69 6102 4351 1577 197 27 3 chr2 163001722 163002021 -90254562 - AluJo SINE Alu -6 306 1 28 29 0 0 chr2 163002357 163002392 -90254191 + AT_rich Low_complexity Low_complexity 1 35 0 1944 204 11 53 chr2 163002547 163002983 -90253600 + MER47B DNA MER2_type 1 418 0 503 352 62 40 chr2 163003015 163003627 -90252956 - L2 LINE L2 -76 3237 2622 1935 139 30 24 chr2 163005007 163005344 -90251239 + MER2 DNA MER2_type 1 339 -6 2268 121 0 0 chr2 163006749 163007062 -90249521 - AluSq SINE Alu 0 313 1 466 164 60 75 chr2 163007201 163007335 -90249248 - MER69A DNA AcHobo -35 142 11 669 305 75 13 chr2 163007957 163008196 -90248387 - MIR SINE MIR -6 256 3 862 210 27 0 chr2 163008227 163008413 -90248170 - MLT1B LTR MaLR -8 382 192 262 385 7 7 chr2 163009876 163010011 -90246572 + G-rich Low_complexity Low_complexity 4 138 0 988 232 31 31 chr2 163011471 163011725 -90244858 + LTR52 LTR ERVL 15 268 -153 3476 47 5 0 chr2 163012283 163012712 -90243871 - L1PA5 LINE L1 -1 6153 5723 1968 115 59 0 chr2 163012715 163013003 -90243580 - AluSg SINE Alu -5 305 1 200 118 29 0 chr2 163013061 163013095 -90243488 + A-rich Low_complexity Low_complexity 2 36 0 243 303 45 11 chr2 163013326 163013415 -90243168 + MIR3 SINE MIR 85 176 -32 181 321 79 14 chr2 163014287 163014427 -90242156 + L2 LINE L2 2835 2983 -289 256 369 92 23 chr2 163016138 163016268 -90240315 - L2 LINE L2 0 3272 3134 194 296 28 28 chr2 163016563 163016634 -90239949 - MIR3 SINE MIR -51 157 87 192 200 46 62 chr2 163017452 163017517 -90239066 + L3b LINE CR1 1288 1351 -232 1666 190 53 18 chr2 163017580 163017922 -90238661 + MLT1A1 LTR MaLR 10 363 -2 1919 72 0 0 chr2 163020669 163020906 -90235677 - AluY SINE Alu -6 305 69 365 272 0 0 chr2 163021026 163021107 -90235476 + MIR3 SINE MIR 83 163 -45 207 336 84 44 chr2 163021334 163021560 -90235023 - L3b LINE CR1 -1 1582 1348 874 203 16 5 chr2 163022084 163022271 -90234312 + MER5A DNA MER1_type 1 189 0 272 274 14 0 chr2 163023385 163023458 -90233125 - L3 LINE CR1 -855 722 649 21 0 0 0 chr2 163024431 163024452 -90232131 + AT_rich Low_complexity Low_complexity 1 21 0 2318 138 41 8 chr2 163029010 163029400 -90227183 + MER57A LTR ERV1 1 403 0 828 307 82 31 chr2 163032145 163032572 -90224011 + LTR16A LTR ERVL 1 455 -2 647 58 0 11 chr2 163033146 163033233 -90223350 - AluY SINE Alu -12 299 214 5753 115 23 44 chr2 163033608 163034276 -90222307 - L1PA14 LINE L1 -2 6159 5479 180 77 0 0 chr2 163034276 163034302 -90222281 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 5753 115 23 44 chr2 163034302 163035575 -90221008 - L1PA14 LINE L1 -682 5479 4227 4713 130 17 15 chr2 163035576 163036439 -90220144 - L1PA12 LINE L1 -4305 3279 2364 2346 74 0 7 chr2 163036440 163036738 -90219845 - AluY SINE Alu -15 296 1 6497 139 34 3 chr2 163036738 163037719 -90218864 - L1PA12 LINE L1 -5538 2043 1033 * 9155 138 18 2 chr2 163037718 163039231 -90217352 - L1P LINE L1 -1522 4624 3088 6303 82 11 41 chr2 163039231 163039729 -90216854 + L1PA10 LINE L1 4667 5179 -989 2281 115 3 0 chr2 163039729 163040034 -90216549 + AluSx SINE Alu 1 306 -6 6303 82 11 41 chr2 163040034 163040565 -90216018 + L1PA10 LINE L1 5179 5649 -519 2129 117 0 0 chr2 163040565 163040847 -90215736 + AluSx SINE Alu 1 282 -30 6303 82 11 41 chr2 163040847 163041350 -90215233 + L1PA10 LINE L1 5649 6166 -2 483 138 161 0 chr2 163041351 163041438 -90215145 - L1PA12 LINE L1 -6803 778 678 270 0 0 0 chr2 163041785 163041815 -90214768 + (TTA)n Simple_repeat Simple_repeat 2 31 0 671 150 7 57 chr2 163042237 163042377 -90214206 + FLAM_C SINE Alu 1 133 -10 2733 80 95 7 chr2 163042786 163043198 -90213385 - LTR7 LTR ERV1 -2 448 1 1810 96 11 18 chr2 163043198 163043480 -90213103 - HERVH LTR ERV1 0 7713 7434 1338 140 85 13 chr2 163043583 163043819 -90212764 + MSTA LTR MaLR 176 428 0 1963 157 10 0 chr2 163043985 163044291 -90212292 + AluSx SINE Alu 1 309 -3 24 0 0 0 chr2 163044328 163044352 -90212231 + AT_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr2 163046761 163046781 -90209802 + (TA)n Simple_repeat Simple_repeat 2 21 0 2445 96 3 0 chr2 163048823 163049135 -90207448 - AluSq SINE Alu 0 313 1 211 214 0 0 chr2 163049744 163049786 -90206797 + (TATATG)n Simple_repeat Simple_repeat 6 47 0 508 273 149 3 chr2 163050357 163050559 -90206024 - L1MCc LINE L1 -4887 1536 1328 246 32 0 0 chr2 163050559 163050590 -90205993 + (TC)n Simple_repeat Simple_repeat 1 31 0 508 273 149 3 chr2 163050590 163050698 -90205885 - L1MCc LINE L1 -5095 1328 1237 1209 254 40 77 chr2 163051128 163051295 -90205288 - MER21B LTR ERV1 -107 756 584 3707 116 16 0 chr2 163051295 163051840 -90204743 - MER41A LTR ERV1 0 554 1 1209 254 40 77 chr2 163051840 163052125 -90204458 - MER21B LTR ERV1 -279 584 321 840 241 82 36 chr2 163052147 163052367 -90204216 - MER21B LTR ERV1 -615 248 19 537 108 0 72 chr2 163052548 163052742 -90203841 + (TA)n Simple_repeat Simple_repeat 1 180 0 26 50 0 0 chr2 163053034 163053074 -90203509 + AT_rich Low_complexity Low_complexity 1 40 0 644 50 0 0 chr2 163053595 163053675 -90202908 + MADE1 DNA Mariner 1 80 0 231 91 0 0 chr2 163054092 163054125 -90202458 - L1M LINE L1 -875 5427 5395 378 230 10 0 chr2 163054844 163054944 -90201639 + L1MB8 LINE L1 6072 6172 -6 241 259 0 17 chr2 163056684 163056742 -90199841 - MIR3 SINE MIR -2 206 150 2443 167 15 8 chr2 163057350 163057745 -90198838 + MER6A DNA MER2_type 1 398 -207 2144 163 64 7 chr2 163057745 163058150 -90198433 + MSTA LTR MaLR 1 428 0 8525 176 63 5 chr2 163058151 163058413 -90198170 + MSTA-int LTR MaLR 1 246 -1405 2115 129 33 33 chr2 163058413 163058777 -90197806 - THE1B LTR MaLR 0 364 1 8525 176 63 5 chr2 163058777 163060058 -90196525 + MSTA-int LTR MaLR 246 1635 -16 2573 141 16 14 chr2 163060063 163060490 -90196093 + MSTA LTR MaLR 1 428 0 813 89 24 0 chr2 163060490 163060614 -90195969 + MER6A DNA MER2_type 394 520 -85 2220 118 40 9 chr2 163060616 163060965 -90195618 - THE1B LTR MaLR -2 362 3 8666 104 35 113 chr2 163060967 163062146 -90194437 - THE1B-int LTR MaLR 0 1580 391 1017 167 0 0 chr2 163062146 163062302 -90194281 + AluSg/x SINE Alu 136 291 -21 8666 104 35 113 chr2 163062302 163062576 -90194007 - THE1B-int LTR MaLR -1189 391 97 807 107 0 0 chr2 163062573 163062694 -90193889 - THE1B-int LTR MaLR -1424 156 36 * 2124 130 0 0 chr2 163062694 163062994 -90193589 - AluSc SINE Alu 0 309 10 1856 104 21 18 chr2 163063028 163063308 -90193275 - THE1B LTR MaLR -83 281 1 585 117 75 0 chr2 163063308 163063396 -90193187 + MER6A DNA MER2_type 511 605 0 2173 239 81 33 chr2 163064509 163064710 -90191873 + L1ME1 LINE L1 5377 5567 -599 1812 157 3 46 chr2 163064710 163065034 -90191549 - AluJb SINE Alu -1 311 2 2173 239 81 33 chr2 163065034 163065581 -90191002 + L1ME1 LINE L1 5567 6161 -5 23 54 0 0 chr2 163066016 163066053 -90190530 + AT_rich Low_complexity Low_complexity 1 37 0 2116 104 10 3 chr2 163066296 163066584 -90189999 + AluSq SINE Alu 1 290 -23 408 40 0 0 chr2 163066597 163066647 -90189936 + (GGAA)n Simple_repeat Simple_repeat 3 52 0 1466 289 88 67 chr2 163066823 163068342 -90188241 + L1ME1 LINE L1 92 1641 -4755 * 2720 244 68 43 chr2 163068338 163069666 -90186917 + L1ME1 LINE L1 4144 6224 -11 25 0 0 0 chr2 163069666 163069691 -90186892 + AT_rich Low_complexity Low_complexity 1 25 0 1341 231 49 52 chr2 163069713 163070285 -90186298 + L1MB8 LINE L1 3443 4012 -2134 21 104 0 0 chr2 163070293 163070370 -90186213 + AT_rich Low_complexity Low_complexity 1 77 0 459 208 0 0 chr2 163070377 163070454 -90186129 - Tigger5 DNA MER2_type 0 2323 2247 344 211 40 0 chr2 163070524 163070600 -90185983 - Tigger5 DNA MER2_type -2244 79 1 410 269 145 0 chr2 163070600 163070786 -90185797 + L1MB8 LINE L1 4391 4603 -1543 216 0 0 0 chr2 163070808 163070832 -90185751 + (T)n Simple_repeat Simple_repeat 1 24 0 433 149 0 0 chr2 163070906 163070980 -90185603 + AluS SINE Alu 1 74 -235 741 191 0 0 chr2 163070988 163071119 -90185464 + AluJb SINE Alu 157 287 -25 1023 228 23 105 chr2 163071140 163071491 -90185092 + MLT2C1 LTR ERVL 1 312 -85 2075 122 3 19 chr2 163071491 163071802 -90184781 - AluSx SINE Alu -6 306 1 1023 228 23 105 chr2 163071802 163071880 -90184703 + MLT2C1 LTR ERVL 312 395 -2 2694 208 55 2 chr2 163071881 163072586 -90183997 + L1MB8 LINE L1 4671 5417 -747 2014 227 71 46 chr2 163072594 163073273 -90183310 + L1MB8 LINE L1 5476 6171 -7 34 24 0 0 chr2 163073273 163073314 -90183269 + AT_rich Low_complexity Low_complexity 1 41 0 28 102 0 0 chr2 163073522 163073620 -90182963 + AT_rich Low_complexity Low_complexity 1 98 0 416 200 0 0 chr2 163073979 163074059 -90182524 - MER116 DNA Mariner 0 80 1 549 301 33 6 chr2 163074502 163074685 -90181898 - MIR SINE MIR -2 260 73 1212 241 75 63 chr2 163076963 163077683 -90178900 + L1MC5 LINE L1 6403 7005 -803 1015 216 44 0 chr2 163077781 163077985 -90178598 - MER58A DNA MER1_type 0 224 12 311 233 67 67 chr2 163077989 163078139 -90178444 + L1MC5 LINE L1 7198 7347 -614 322 296 0 0 chr2 163078211 163078299 -90178284 + (TA)n Simple_repeat Simple_repeat 2 89 0 651 252 73 23 chr2 163078310 163078612 -90177971 + L1MC5 LINE L1 7609 7925 -36 22 35 0 0 chr2 163079322 163079351 -90177232 + AT_rich Low_complexity Low_complexity 1 29 0 319 356 95 5 chr2 163079506 163079728 -90176855 - MIR SINE MIR -1 261 20 21 0 0 0 chr2 163080110 163080131 -90176452 + AT_rich Low_complexity Low_complexity 1 21 0 267 347 60 15 chr2 163080500 163080699 -90175884 + L2 LINE L2 2850 3057 -215 225 0 0 0 chr2 163081185 163081210 -90175373 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 5513 198 9 1 chr2 163081310 163082604 -90173979 - L1P5 LINE L1 -688 5463 4157 1848 128 4 0 chr2 163082604 163082870 -90173713 - AluSp SINE Alu 0 313 47 293 62 21 0 chr2 163082973 163083021 -90173562 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 275 376 37 0 chr2 163083585 163083694 -90172889 + L2 LINE L2 3196 3308 -5 747 312 148 38 chr2 163084376 163084828 -90171755 + L2 LINE L2 2812 3313 0 374 262 97 79 chr2 163084858 163085148 -90171435 + L1ME4a LINE L1 5824 6118 -3 634 263 6 22 chr2 163086683 163086862 -90169721 - MER5B DNA MER1_type 0 178 3 378 191 0 0 chr2 163087013 163087081 -90169502 - MLT1E2 LTR MaLR 0 626 559 303 203 0 14 chr2 163087535 163087609 -90168974 - HAL1 LINE L1 -360 2147 2075 1665 150 87 14 chr2 163087663 163087950 -90168633 + AluJo SINE Alu 5 312 0 586 174 76 0 chr2 163088129 163088261 -90168322 + L1MB1 LINE L1 6026 6167 -1 311 325 79 16 chr2 163088309 163088435 -90168148 - HAL1 LINE L1 -559 1948 1815 3546 55 2 0 chr2 163088743 163089195 -90167388 - L1PA7 LINE L1 -2 6152 5700 377 360 37 11 chr2 163090141 163090330 -90166253 + MIR SINE MIR 10 203 -59 228 81 0 0 chr2 163090352 163090389 -90166194 - L1PA15 LINE L1 0 6165 6129 387 105 0 0 chr2 163090530 163090587 -90165996 + (CA)n Simple_repeat Simple_repeat 2 58 0 235 71 48 0 chr2 163091986 163092028 -90164555 + (TA)n Simple_repeat Simple_repeat 1 44 0 324 316 113 34 chr2 163093357 163093534 -90163049 + MIR SINE MIR 20 210 -52 198 209 0 0 chr2 163095915 163095958 -90160625 + (TATATG)n Simple_repeat Simple_repeat 5 47 0 195 129 0 0 chr2 163096924 163096955 -90159628 + (TG)n Simple_repeat Simple_repeat 2 32 0 252 186 0 0 chr2 163097391 163097450 -90159133 + (CA)n Simple_repeat Simple_repeat 1 59 0 183 80 0 0 chr2 163099012 163099037 -90157546 + (TATG)n Simple_repeat Simple_repeat 3 27 0 198 103 0 0 chr2 163099525 163099554 -90157029 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 237 316 32 27 chr2 163100181 163100312 -90156271 + MIR SINE MIR 17 129 -79 26 30 0 0 chr2 163101425 163101458 -90155125 + AT_rich Low_complexity Low_complexity 1 33 0 437 267 9 0 chr2 163101459 163101564 -90155019 + MIR SINE MIR 147 252 -10 1655 195 96 30 chr2 163101585 163102021 -90154562 - MLT1C LTR MaLR 0 467 3 251 323 43 115 chr2 163102481 163102943 -90153640 + L2 LINE L2 2821 3249 -23 * 402 331 127 42 chr2 163102917 163103225 -90153358 - L2 LINE L2 0 3272 2939 387 340 106 49 chr2 163103331 163103820 -90152763 - L2 LINE L2 -556 2758 2242 328 251 102 60 chr2 163103851 163104018 -90152565 - MER5B DNA MER1_type -4 174 1 330 164 48 34 chr2 163104030 163104176 -90152407 + (TA)n Simple_repeat Simple_repeat 2 149 0 2676 159 56 20 chr2 163104219 163104716 -90151867 + MLT2B2 LTR ERVL 1 515 0 247 389 41 9 chr2 163104720 163104941 -90151642 + L2 LINE L2 2827 3054 -218 1028 103 0 0 chr2 163105225 163105381 -90151202 + L1MA8 LINE L1 6135 6290 -1 1619 91 0 5 chr2 163105462 163105682 -90150901 + L1PA7 LINE L1 5932 6150 -4 699 214 66 90 chr2 163105698 163106030 -90150553 - L1MA9 LINE L1 -30 6282 5959 729 215 31 43 chr2 163106057 163106220 -90150363 - AluJo SINE Alu -31 281 121 2281 190 19 0 chr2 163106233 163106665 -90149918 - L1MA9 LINE L1 -377 5935 5496 435 209 229 0 chr2 163106846 163106951 -90149632 + FLAM_C SINE Alu 4 132 -1 298 291 159 77 chr2 163107029 163107507 -90149076 + LTR33 LTR ERVL 3 519 -2 1991 94 4 18 chr2 163107963 163108239 -90148344 - AluSq SINE Alu -17 296 25 491 316 91 0 chr2 163108607 163108794 -90147789 + MIR SINE MIR 5 208 -54 702 184 43 0 chr2 163108929 163109070 -90147513 - FRAM SINE Alu -21 155 9 381 302 22 7 chr2 163109982 163110121 -90146462 + MLT1J1 LTR MaLR 11 151 -295 403 318 47 0 chr2 163110258 163110365 -90146218 - L2 LINE L2 0 3313 3202 358 250 60 0 chr2 163110602 163110702 -90145881 + MER112 DNA MER1_type 149 254 -6 779 179 113 0 chr2 163110905 163111056 -90145527 - FRAM SINE Alu 0 176 9 198 217 0 36 chr2 163111173 163111256 -90145327 + GA-rich Low_complexity Low_complexity 2 81 0 207 0 0 0 chr2 163112789 163112812 -90143771 + (TGGGGG)n Simple_repeat Simple_repeat 2 24 0 413 296 31 66 chr2 163112891 163113117 -90143466 + L2 LINE L2 3095 3312 -1 255 242 0 0 chr2 163113426 163113488 -90143095 - L1MEd LINE L1 -4886 1233 1172 479 250 113 63 chr2 163113512 163113796 -90142787 - L1MEd LINE L1 -5011 1108 811 3320 47 0 0 chr2 163114339 163114744 -90141839 - L1PA7 LINE L1 -13 6141 5737 185 362 0 0 chr2 163115236 163115283 -90141300 + L2 LINE L2 3179 3225 -88 24 0 0 0 chr2 163115690 163115714 -90140869 + AT_rich Low_complexity Low_complexity 1 24 0 292 155 121 0 chr2 163116924 163116982 -90139601 + MER5A DNA MER1_type 42 106 -83 369 282 57 70 chr2 163117918 163118145 -90138438 - L1MEc LINE L1 -4317 2079 1856 752 295 70 8 chr2 163118210 163118597 -90137986 - L1MEc LINE L1 -4775 1621 1211 1383 151 62 75 chr2 163118850 163119142 -90137441 + AluJo SINE Alu 1 288 -24 319 390 81 5 chr2 163119274 163119497 -90137086 + MIR SINE MIR 5 244 -18 754 308 24 0 chr2 163119895 163120106 -90136477 - MIR SINE MIR -10 252 37 21 0 0 0 chr2 163121730 163121751 -90134832 + AT_rich Low_complexity Low_complexity 1 21 0 31 0 0 0 chr2 163122384 163122415 -90134168 + AT_rich Low_complexity Low_complexity 1 31 0 235 288 34 42 chr2 163123719 163123837 -90132746 + L1MC4 LINE L1 6586 6702 -1340 387 268 39 16 chr2 163124201 163124328 -90132255 - MIR3 SINE MIR -31 177 48 1218 247 67 110 chr2 163124462 163125244 -90131339 - MER20B DNA MER1_type 0 783 36 23 54 0 0 chr2 163125349 163125386 -90131197 + AT_rich Low_complexity Low_complexity 1 37 0 26 107 0 0 chr2 163125505 163125608 -90130975 + AT_rich Low_complexity Low_complexity 1 103 0 710 194 0 38 chr2 163126426 163126586 -90129997 - FRAM SINE Alu -12 154 1 508 174 11 0 chr2 163127200 163127292 -90129291 - MER5A DNA MER1_type -83 106 14 194 234 0 13 chr2 163127733 163127810 -90128773 + (TA)n Simple_repeat Simple_repeat 2 77 0 258 215 31 0 chr2 163127835 163127900 -90128683 + L1MC4 LINE L1 6637 6703 -1339 * 274 239 43 11 chr2 163127872 163127964 -90128619 - L1MC4 LINE L1 -1339 6703 6609 197 268 0 9 chr2 163127996 163128108 -90128475 + (TA)n Simple_repeat Simple_repeat 1 111 0 273 62 70 0 chr2 163128378 163128428 -90128155 - L1P5 LINE L1 -422 5729 5677 * 339 80 40 0 chr2 163128395 163128445 -90128138 - L1P1 LINE L1 -446 5709 5658 1821 31 9 0 chr2 163128445 163128662 -90127921 + L1PA5 LINE L1 5921 6145 -9 21 0 0 0 chr2 163128663 163128684 -90127899 + AT_rich Low_complexity Low_complexity 1 21 0 2172 115 0 3 chr2 163128918 163129213 -90127370 + AluSx SINE Alu 1 294 -18 23 0 0 0 chr2 163129383 163129406 -90127177 + AT_rich Low_complexity Low_complexity 1 23 0 2078 110 7 0 chr2 163129962 163130262 -90126321 - AluSx SINE Alu -10 302 1 2136 118 36 25 chr2 163130373 163130730 -90125853 + THE1B LTR MaLR 3 363 -1 2773 66 0 3 chr2 163130731 163131093 -90125490 + THE1B-int LTR MaLR 1 361 -1219 1666 147 7 41 chr2 163131106 163131399 -90125184 + THE1B LTR MaLR 72 354 -10 2981 113 4 0 chr2 163133781 163134231 -90122352 - L1PA14 LINE L1 -4 6157 5706 181 243 68 68 chr2 163135844 163135918 -90120665 + MIR3 SINE MIR 97 170 -38 425 303 102 68 chr2 163135989 163136398 -90120185 + L1M4 LINE L1 3632 4063 -2083 2193 132 0 0 chr2 163136398 163136709 -90119874 + AluSx SINE Alu 1 311 -1 425 303 102 68 chr2 163136709 163136798 -90119785 + L1M4 LINE L1 4063 4147 -1999 14753 123 21 24 chr2 163136805 163138348 -90118235 - Tigger1 DNA MER2_type 0 2418 872 1823 150 27 3 chr2 163138348 163138641 -90117942 - AluSx SINE Alu -12 300 1 14753 123 21 24 chr2 163138641 163138988 -90117595 - Tigger1 DNA MER2_type -1546 872 525 2131 114 0 0 chr2 163138988 163139277 -90117306 - AluSx SINE Alu -10 302 14 14753 123 21 24 chr2 163139277 163139323 -90117260 - Tigger1 DNA MER2_type -1893 525 480 1528 184 7 43 chr2 163139323 163139622 -90116961 - AluJo SINE Alu -24 288 1 14753 123 21 24 chr2 163139622 163140108 -90116475 - Tigger1 DNA MER2_type -1938 480 1 198 0 0 0 chr2 163141067 163141089 -90115494 + (T)n Simple_repeat Simple_repeat 1 22 0 294 73 0 0 chr2 163142220 163142261 -90114322 + (CA)n Simple_repeat Simple_repeat 2 42 0 3662 110 4 0 chr2 163142518 163143045 -90113538 - L1PA15 LINE L1 -1 6164 5636 420 165 0 134 chr2 163143960 163144057 -90112526 - Tigger7 DNA MER2_type -2 2485 2402 24 77 0 0 chr2 163144617 163144669 -90111914 + AT_rich Low_complexity Low_complexity 1 52 0 21 0 0 0 chr2 163145284 163145305 -90111278 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr2 163145605 163145642 -90110941 + AT_rich Low_complexity Low_complexity 1 37 0 1690 124 13 126 chr2 163145733 163146113 -90110470 - MER44D DNA MER2_type -2 607 1 21 0 0 0 chr2 163147645 163147666 -90108917 + AT_rich Low_complexity Low_complexity 1 21 0 1075 182 0 45 chr2 163148095 163148315 -90108268 - AluJb SINE Alu -21 291 82 368 204 204 80 chr2 163148355 163148581 -90108002 + MER112 DNA MER1_type 1 254 -6 961 103 242 6 chr2 163149126 163149291 -90107292 - MER30 DNA MER1_type -26 204 1 370 263 35 0 chr2 163149348 163149462 -90107121 + L1MEc LINE L1 108 225 -6171 1200 172 187 11 chr2 163149598 163149866 -90106717 - MSTA LTR MaLR 0 428 114 1069 253 58 36 chr2 163149992 163150720 -90105863 + L1MEc LINE L1 498 1354 -5042 1039 259 76 50 chr2 163150738 163151317 -90105266 + L1MEc LINE L1 1409 2002 -4394 656 250 136 16 chr2 163151364 163151548 -90105035 + MER58C DNA MER1_type 10 215 0 2483 237 46 55 chr2 163151548 163152770 -90103813 + L1MEc LINE L1 2020 3193 -3022 269 189 31 94 chr2 163153373 163153532 -90103051 + L1MEc LINE L1 3239 3387 -2828 1911 237 79 9 chr2 163153535 163154177 -90102406 + L1M4 LINE L1 4408 5094 -1052 13285 177 34 17 chr2 163154189 163160196 -90096387 - L1MA4A LINE L1 -9 7356 1239 267 295 57 48 chr2 163160291 163160396 -90096187 - L1MA4A LINE L1 -5977 1232 1117 24 77 0 0 chr2 163160471 163160523 -90096060 + AT_rich Low_complexity Low_complexity 1 52 0 356 310 87 65 chr2 163161435 163161758 -90094825 + MLT1I LTR MaLR 42 371 -38 233 250 0 0 chr2 163162089 163162153 -90094430 + L1MC4 LINE L1 6640 6703 -1339 676 232 77 46 chr2 163162361 163162555 -90094028 - MER58C DNA MER1_type 0 215 16 211 290 0 0 chr2 163163369 163163438 -90093145 + A-rich Low_complexity Low_complexity 1 69 0 1495 194 18 4 chr2 163164249 163164553 -90092030 - AluJo SINE Alu 0 308 1 504 274 132 9 chr2 163165005 163165217 -90091366 + MIR SINE MIR 20 257 -5 26 50 0 0 chr2 163165854 163165894 -90090689 + AT_rich Low_complexity Low_complexity 1 40 0 376 201 35 28 chr2 163165899 163166043 -90090540 + (TTATA)n Simple_repeat Simple_repeat 2 146 0 2521 57 0 0 chr2 163166846 163167146 -90089437 + AluY SINE Alu 3 302 -9 965 256 33 4 chr2 163168256 163168529 -90088054 - L3b LINE CR1 -189 1394 1114 2543 163 30 32 chr2 163168802 163169329 -90087254 + LTR27 LTR ERV1 3 528 -108 765 291 61 34 chr2 163169673 163170085 -90086498 - L1ME3 LINE L1 -211 5951 5529 279 273 137 25 chr2 163170092 163170802 -90085781 - L1ME3 LINE L1 -874 5272 4460 * 1723 225 40 1 chr2 163170774 163171221 -90085362 - L1 LINE L1 -807 5339 4880 * 2342 265 36 40 chr2 163171220 163172405 -90084178 - L1ME LINE L1 -677 5556 4372 249 273 14 43 chr2 163172746 163172885 -90083698 + A-rich Low_complexity Low_complexity 6 140 0 830 317 100 52 chr2 163172959 163173939 -90082644 - L1ME LINE L1 -5333 1063 37 641 277 35 76 chr2 163174617 163175039 -90081544 + MLT1I LTR MaLR 1 405 -4 23 0 0 0 chr2 163175172 163175195 -90081388 + AT_rich Low_complexity Low_complexity 1 23 0 691 313 19 5 chr2 163175794 163176002 -90080581 + MIR SINE MIR 18 228 -34 22 35 0 0 chr2 163176007 163176036 -90080547 + AT_rich Low_complexity Low_complexity 1 29 0 188 337 96 0 chr2 163176170 163176253 -90080330 - MIR3 SINE MIR -3 205 115 22 0 0 0 chr2 163176378 163176400 -90080183 + AT_rich Low_complexity Low_complexity 1 22 0 429 244 76 17 chr2 163176974 163177093 -90079490 - L2 LINE L2 -5 3267 3142 442 322 71 46 chr2 163177489 163177840 -90078743 + MLT1I LTR MaLR 46 405 -4 196 343 48 48 chr2 163178042 163178188 -90078395 - L2 LINE L2 -996 2318 2173 277 279 71 97 chr2 163178745 163178899 -90077684 + L2 LINE L2 3163 3312 -1 1339 311 70 38 chr2 163179023 163179851 -90076732 + L2 LINE L2 2467 3308 -5 588 133 11 0 chr2 163179865 163179955 -90076628 - MSTB1 LTR MaLR 0 432 342 7865 37 0 0 chr2 163180055 163181789 -90074794 + L1PA3 LINE L1 4421 6155 0 3758 235 95 62 chr2 163181820 163182445 -90074138 - L1M4c LINE L1 -3900 2746 2143 255 31 0 0 chr2 163182445 163182477 -90074106 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 3758 235 95 62 chr2 163182477 163183576 -90073007 - L1M4c LINE L1 -4503 2143 965 360 154 60 60 chr2 163183626 163183743 -90072840 - L1M4c LINE L1 -6371 171 55 2067 290 31 20 chr2 163183776 163184721 -90071862 - L1MEc LINE L1 -3060 3155 2201 296 293 60 14 chr2 163184725 163184940 -90071643 - L1MEc LINE L1 -4176 2220 1996 452 328 41 25 chr2 163185030 163185423 -90071160 - L1MEc LINE L1 -4393 2003 1605 451 221 56 56 chr2 163185648 163185897 -90070686 - L1MEc LINE L1 -5054 1151 903 615 369 63 58 chr2 163186434 163187069 -90069514 + L3 LINE CR1 762 1399 -178 256 301 87 10 chr2 163187918 163188021 -90068562 + MIR SINE MIR 28 138 -70 1131 259 292 15 chr2 163189417 163190016 -90066567 - LTR50 LTR ERVL -23 772 8 6011 120 41 13 chr2 163190173 163191446 -90065137 - L1PB1 LINE L1 -44 6107 4796 1245 106 53 57 chr2 163191446 163191673 -90064910 - THE1B LTR MaLR 0 364 139 2260 77 7 0 chr2 163191693 163192003 -90064580 - L1PBa LINE L1 -5093 1770 1459 5835 114 20 0 chr2 163192514 163194019 -90062564 - L1PA14 LINE L1 -17 6144 4629 23 54 0 0 chr2 163194159 163194196 -90062387 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr2 163194821 163194844 -90061739 + AT_rich Low_complexity Low_complexity 1 23 0 264 30 0 0 chr2 163194993 163195026 -90061557 + (CAAAAA)n Simple_repeat Simple_repeat 3 35 0 1404 140 140 11 chr2 163195805 163196069 -90060514 - AluJb SINE Alu -2 300 3 849 142 0 0 chr2 163196620 163196747 -90059836 + FLAM_C SINE Alu 1 127 -6 630 298 18 46 chr2 163196948 163197166 -90059417 + MIR SINE MIR 12 223 -39 2451 167 24 7 chr2 163197218 163197637 -90058946 + MSTB LTR MaLR 1 426 0 21 36 0 0 chr2 163198450 163198478 -90058105 + AT_rich Low_complexity Low_complexity 1 28 0 327 308 19 19 chr2 163198735 163198839 -90057744 + MIR SINE MIR 3 106 -156 199 283 22 0 chr2 163198831 163198877 -90057706 + L2 LINE L2 3251 3297 -16 * 1109 302 70 14 chr2 163198929 163199343 -90057240 - L2 LINE L2 -453 2861 2425 1413 88 5 5 chr2 163200122 163200315 -90056268 - MER107 DNA MER1_type 0 197 5 2413 128 15 46 chr2 163200605 163201064 -90055519 - MER65A LTR ERV1 0 445 1 1815 146 19 0 chr2 163202846 163203114 -90053469 + AluSx SINE Alu 8 280 -32 312 120 0 0 chr2 163203118 163203138 -90053445 + (CA)n Simple_repeat Simple_repeat 1 70 0 312 120 0 0 chr2 163203138 163203188 -90053395 + (CA)n Simple_repeat Simple_repeat 2 51 0 22 0 0 0 chr2 163205137 163205159 -90051424 + AT_rich Low_complexity Low_complexity 1 22 0 187 174 22 43 chr2 163205750 163205796 -90050787 + MIR3 SINE MIR 157 201 -7 251 340 10 10 chr2 163205833 163205930 -90050653 - MARNA DNA Mariner -405 181 85 604 148 65 0 chr2 163206128 163206236 -90050347 - MER58 DNA MER1_type 0 2420 2306 782 277 27 50 chr2 163207113 163207132 -90049451 + MIR SINE MIR 6 24 -238 2067 142 9 20 chr2 163207132 163207476 -90049107 + MER58B DNA MER1_type 1 340 -1 782 277 27 50 chr2 163207476 163207716 -90048867 + MIR SINE MIR 24 259 -3 1765 147 0 7 chr2 163208819 163209098 -90047485 + AluSq SINE Alu 33 309 -4 21 0 0 0 chr2 163209483 163209504 -90047079 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr2 163209597 163209628 -90046955 + AT_rich Low_complexity Low_complexity 1 31 0 2247 106 16 0 chr2 163209823 163210126 -90046457 - AluSc SINE Alu -1 308 1 199 336 53 69 chr2 163210149 163210280 -90046303 + L2 LINE L2 3139 3267 -5 207 281 112 11 chr2 163212538 163212627 -90043956 + L2 LINE L2 2221 2318 -996 226 263 84 21 chr2 163212679 163212774 -90043809 - L1M3 LINE L1 -449 5719 5619 700 200 77 47 chr2 163212969 163213139 -90043444 - MER20 DNA MER1_type -21 198 24 411 38 0 0 chr2 163214711 163214764 -90041819 + (CA)n Simple_repeat Simple_repeat 2 54 0 263 260 41 0 chr2 163215443 163215516 -90041067 + MIR3 SINE MIR 84 159 -49 362 251 160 18 chr2 163215519 163215738 -90040845 - MER112 DNA MER1_type -3 253 4 209 205 0 0 chr2 163219210 163219249 -90037334 - MIR SINE MIR -4 258 220 317 320 0 10 chr2 163219309 163219409 -90037174 + L2 LINE L2 3215 3313 0 233 309 33 22 chr2 163219415 163219568 -90037015 - MIR SINE MIR -64 198 5 2729 174 100 6 chr2 163219589 163219621 -90036962 - MLT2B3 LTR ERVL -8 546 518 216 0 0 0 chr2 163219621 163219645 -90036938 + (TAGA)n Simple_repeat Simple_repeat 2 25 0 2729 174 100 6 chr2 163219645 163220111 -90036472 - MLT2B3 LTR ERVL -36 518 1 7487 146 7 9 chr2 163220119 163221303 -90035280 - ERVL-B3 LTR ERVL -15 5749 4569 395 323 59 86 chr2 163222025 163222712 -90033871 + L2 LINE L2 2585 3256 -16 2224 115 3 0 chr2 163222712 163223016 -90033567 + AluSp SINE Alu 1 305 -8 395 323 59 86 chr2 163223016 163223032 -90033551 + L2 LINE L2 3256 3271 -1 236 98 0 24 chr2 163223033 163223074 -90033509 + (GGAA)n Simple_repeat Simple_repeat 2 41 0 531 300 79 12 chr2 163224705 163224945 -90031638 - MIR SINE MIR -4 258 3 618 245 10 68 chr2 163225365 163225557 -90031026 + MER63A DNA MER1_type 3 183 -27 188 281 109 0 chr2 163225864 163225928 -90030655 + L2 LINE L2 3193 3263 -50 21 0 0 0 chr2 163227001 163227022 -90029561 + AT_rich Low_complexity Low_complexity 1 21 0 204 231 0 0 chr2 163227397 163227449 -90029134 + (TG)n Simple_repeat Simple_repeat 2 53 0 2763 70 95 7 chr2 163227601 163228013 -90028570 + LTR7 LTR ERV1 1 448 -2 19974 91 13 30 chr2 163228015 163231053 -90025530 + HERVH LTR ERV1 1 2987 -4726 828 152 41 0 chr2 163231047 163231192 -90025391 + HERVH LTR ERV1 3140 3290 -4423 * 3416 89 8 14 chr2 163231182 163231687 -90024896 + HERVH LTR ERV1 3492 3993 -3720 4288 139 1 9 chr2 163231689 163232356 -90024227 + HERVH LTR ERV1 4488 5149 -2564 1316 148 19 0 chr2 163232357 163232573 -90024010 + HERVH LTR ERV1 5600 5819 -1894 31 26 0 0 chr2 163234495 163234533 -90022050 + AT_rich Low_complexity Low_complexity 1 38 0 24 32 0 0 chr2 163234849 163234880 -90021703 + AT_rich Low_complexity Low_complexity 1 31 0 616 323 102 0 chr2 163234880 163235115 -90021468 - MIR SINE MIR -1 261 3 26 0 0 0 chr2 163235553 163235579 -90021004 + AT_rich Low_complexity Low_complexity 1 26 0 26 30 0 0 chr2 163235996 163236029 -90020554 + AT_rich Low_complexity Low_complexity 1 33 0 2079 142 0 0 chr2 163236630 163236932 -90019651 + AluSx SINE Alu 1 302 -10 217 234 117 26 chr2 163236932 163237009 -90019574 - MIR SINE MIR -15 247 164 2155 127 0 3 chr2 163237256 163237563 -90019020 - AluSc SINE Alu -3 306 1 198 0 0 0 chr2 163238418 163238440 -90018143 + (TCTA)n Simple_repeat Simple_repeat 1 22 0 261 347 60 56 chr2 163238772 163239057 -90017526 - L2 LINE L2 -338 2976 2691 26 64 0 0 chr2 163239077 163239124 -90017459 + AT_rich Low_complexity Low_complexity 1 47 0 520 341 48 39 chr2 163239444 163239907 -90016676 + MLT1K LTR MaLR 105 571 -17 282 247 124 0 chr2 163240790 163240887 -90015696 - MER5A DNA MER1_type -77 112 4 218 273 45 45 chr2 163240967 163241055 -90015528 - MIR3 SINE MIR -12 196 109 200 306 14 42 chr2 163241525 163241597 -90014986 + L2 LINE L2 3242 3311 -2 1810 306 139 25 chr2 163242415 163243653 -90012930 + L2 LINE L2 1925 3313 0 265 261 0 22 chr2 163243934 163244026 -90012557 + CT-rich Low_complexity Low_complexity 2 91 0 25 31 0 0 chr2 163244981 163245013 -90011570 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr2 163245982 163246004 -90010579 + AT_rich Low_complexity Low_complexity 1 22 0 2394 86 7 0 chr2 163246343 163246646 -90009937 - AluSp SINE Alu -7 306 2 301 353 61 39 chr2 163246737 163247049 -90009534 + L2 LINE L2 2331 2649 -665 231 346 145 41 chr2 163247178 163247571 -90009012 + L2 LINE L2 2826 3259 -13 198 308 58 87 chr2 163248284 163248388 -90008195 - L2 LINE L2 -14 3258 3158 25 31 0 0 chr2 163248404 163248436 -90008147 + AT_rich Low_complexity Low_complexity 1 32 0 1376 131 14 9 chr2 163250888 163251110 -90005473 - L1PB1 LINE L1 0 6151 5929 2182 131 0 0 chr2 163251210 163251515 -90005068 + AluSx SINE Alu 1 305 -7 21 57 0 0 chr2 163252517 163252552 -90004031 + AT_rich Low_complexity Low_complexity 1 35 0 21 57 0 0 chr2 163253132 163253167 -90003416 + AT_rich Low_complexity Low_complexity 1 35 0 3162 208 53 17 chr2 163254347 163255217 -90001366 - L1M4 LINE L1 -3009 3137 2237 21085 34 1 3 chr2 163255220 163260136 -89996447 + L1PA3 LINE L1 3 5867 -288 772 152 13 0 chr2 163260577 163260728 -89995855 + GA-rich Low_complexity Low_complexity 2 154 0 436 222 64 28 chr2 163261770 163261893 -89994690 - MLT1J2 LTR MaLR 0 446 324 192 309 0 18 chr2 163261939 163261994 -89994589 + L2 LINE L2 1083 1136 -2178 1707 279 133 16 chr2 163261998 163262700 -89993883 + L2 LINE L2 1245 2028 -1286 484 317 175 18 chr2 163262704 163263212 -89993371 + L2 LINE L2 2715 3306 -7 218 192 19 0 chr2 163264566 163264618 -89991965 + CT-rich Low_complexity Low_complexity 2 54 0 324 0 0 0 chr2 163264861 163264897 -89991686 + (CA)n Simple_repeat Simple_repeat 2 37 0 239 246 0 0 chr2 163266735 163266792 -89989791 - MIR SINE MIR -87 121 65 308 297 59 14 chr2 163267178 163267366 -89989217 - MIR SINE MIR -13 249 4 1952 134 3 24 chr2 163269198 163269489 -89987094 + AluSx SINE Alu 1 285 -27 666 47 0 0 chr2 163269489 163269575 -89987008 + (CATAG)n Simple_repeat Simple_repeat 2 87 0 186 103 0 0 chr2 163269577 163269606 -89986977 + (TAAAA)n Simple_repeat Simple_repeat 5 33 0 210 316 25 38 chr2 163271939 163272018 -89984565 + MER5B DNA MER1_type 1 78 -100 21 0 0 0 chr2 163272202 163272223 -89984360 + AT_rich Low_complexity Low_complexity 1 21 0 11185 207 27 11 chr2 163273715 163277384 -89979199 - L1PA16 LINE L1 -3 6866 3142 634 170 0 0 chr2 163277407 163277513 -89979070 + L1PA15-16 LINE L1 2453 2558 -4291 * 1514 93 23 9 chr2 163277509 163277725 -89978858 - L1PA16 LINE L1 -4315 2534 2316 765 111 0 0 chr2 163277779 163277887 -89978696 + L1PA15-16 LINE L1 2450 2557 -4292 10209 151 13 14 chr2 163277887 163279573 -89977010 - L1PA15-16 LINE L1 -4319 2530 847 367 180 0 0 chr2 163279574 163279635 -89976948 - L1PA15-16 LINE L1 -6647 202 142 681 209 16 0 chr2 163279867 163279996 -89976587 - FLAM_A SINE Alu -2 131 1 417 330 55 53 chr2 163280028 163280443 -89976140 + L1ME LINE L1 2602 3017 -3129 25 0 0 0 chr2 163280509 163280534 -89976049 + AT_rich Low_complexity Low_complexity 1 25 0 376 333 102 48 chr2 163280624 163281146 -89975437 + L1ME LINE L1 3088 3637 -2509 1038 196 76 0 chr2 163281147 163281372 -89975211 + L1PB4 LINE L1 5914 6155 -1 314 323 113 56 chr2 163281499 163281573 -89975010 + L1ME LINE L1 3748 3816 -2330 4841 208 71 85 chr2 163281573 163283353 -89973230 - MER52A LTR ERV1 0 1755 1 314 323 113 56 chr2 163283353 163283687 -89972896 + L1ME LINE L1 3816 4179 -1967 24 0 0 0 chr2 163283962 163283986 -89972597 + AT_rich Low_complexity Low_complexity 1 24 0 351 0 0 0 chr2 163284044 163284083 -89972500 + (TG)n Simple_repeat Simple_repeat 2 40 0 377 248 46 13 chr2 163284129 163284282 -89972301 + L1ME LINE L1 5582 5739 -382 1801 184 76 25 chr2 163284563 163284970 -89971613 - MSTA LTR MaLR 0 428 1 44386 35 1 1 chr2 163285480 163291643 -89964940 - L1PA3 LINE L1 0 6155 9 25 75 0 0 chr2 163292192 163292245 -89964338 + AT_rich Low_complexity Low_complexity 1 53 0 30 27 0 0 chr2 163292290 163292327 -89964256 + AT_rich Low_complexity Low_complexity 1 37 0 731 261 27 63 chr2 163292373 163292762 -89963821 - L1ME4a LINE L1 -196 5925 5542 207 0 0 0 chr2 163292970 163292993 -89963590 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 227 260 39 29 chr2 163295057 163295161 -89961422 - HAL1 LINE L1 -113 2394 2290 940 220 117 20 chr2 163295170 163295543 -89961040 - LTR50 LTR ERVL -4 791 296 697 220 144 43 chr2 163295686 163296032 -89960551 - HAL1 LINE L1 -320 2187 1807 1184 265 89 50 chr2 163296084 163296768 -89959815 - HAL1 LINE L1 -1078 1429 719 367 283 40 81 chr2 163297125 163297323 -89959260 - HAL1 LINE L1 -2299 208 19 9364 233 48 53 chr2 163297524 163300105 -89956478 - L1 LINE L1 -1306 5800 3208 195 42 0 0 chr2 163300105 163300129 -89956454 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 1968 142 0 3 chr2 163300129 163300418 -89956165 - AluSx SINE Alu -24 288 1 9364 233 48 53 chr2 163300418 163300944 -89955639 - L1 LINE L1 -3897 3209 2682 2369 59 3 3 chr2 163300944 163301230 -89955353 - AluY SINE Alu -25 286 1 9364 233 48 53 chr2 163301230 163302168 -89954415 - L1 LINE L1 -4424 2682 1699 377 184 23 58 chr2 163302187 163302274 -89954309 - L1 LINE L1 -5141 1896 1813 502 309 58 46 chr2 163302650 163303045 -89953538 - L1 LINE L1 -5481 1546 1 22 88 0 0 chr2 163303236 163303293 -89953290 + AT_rich Low_complexity Low_complexity 1 57 0 614 311 147 36 chr2 163303579 163304055 -89952528 - HAL1 LINE L1 -811 1696 1168 297 75 0 0 chr2 163304998 163305038 -89951545 + (CACTT)n Simple_repeat Simple_repeat 2 41 0 2264 77 11 0 chr2 163305038 163305325 -89951258 - AluY SINE Alu -21 290 1 244 339 90 26 chr2 163305606 163305828 -89950755 - MIR SINE MIR 0 262 15 687 303 96 32 chr2 163305855 163306261 -89950322 - MLT1K LTR MaLR 0 588 157 355 143 0 0 chr2 163307546 163307595 -89948988 + MER92B LTR ERV1 1 49 -587 1077 236 58 16 chr2 163307595 163307853 -89948730 - MLT2B3 LTR ERVL -1 553 285 825 126 16 0 chr2 163307974 163308101 -89948482 - Tigger3b DNA MER2_type -304 927 799 * 3352 136 7 28 chr2 163308097 163308643 -89947940 - Tigger3b DNA MER2_type -696 535 1 305 374 24 12 chr2 163309557 163309723 -89946860 + MIR SINE MIR 21 188 -74 376 282 264 6 chr2 163309835 163310009 -89946574 + MER97c DNA MER1_type? 317 535 -555 310 287 98 25 chr2 163310053 163310175 -89946408 - L1ME3A LINE L1 -7 6163 6033 6593 99 23 41 chr2 163310352 163311442 -89945141 + L1MA3 LINE L1 5229 6298 -7 2121 109 3 3 chr2 163311550 163311844 -89944739 - AluSg SINE Alu -11 299 6 229 258 62 0 chr2 163312047 163312144 -89944439 - L1M4 LINE L1 -3176 2970 2868 516 270 81 53 chr2 163312700 163312791 -89943792 - L1M4 LINE L1 -3387 2759 2672 1975 126 28 0 chr2 163312791 163313077 -89943506 + AluSx SINE Alu 4 297 -15 516 270 81 53 chr2 163313077 163313381 -89943202 - L1M4 LINE L1 -3474 2672 2353 247 196 18 0 chr2 163313383 163313439 -89943144 - L1M4 LINE L1 -3868 2278 2222 191 35 0 35 chr2 163313478 163313507 -89943076 + (TA)n Simple_repeat Simple_repeat 1 28 0 22 0 0 0 chr2 163315621 163315643 -89940940 + AT_rich Low_complexity Low_complexity 1 22 0 292 321 165 38 chr2 163315712 163316367 -89940216 - L2 LINE L2 -871 2443 1706 259 322 118 26 chr2 163316848 163317000 -89939583 + MIR3 SINE MIR 4 169 -39 387 235 123 9 chr2 163317035 163317175 -89939408 + MIR SINE MIR 3 154 -65 2316 97 0 0 chr2 163317259 163317557 -89939026 - AluSc SINE Alu -11 298 1 282 160 0 0 chr2 163319457 163319507 -89937076 + (CA)n Simple_repeat Simple_repeat 2 51 0 221 289 33 33 chr2 163319512 163319633 -89936950 - MIR3 SINE MIR -3 205 85 982 235 31 15 chr2 163321226 163321486 -89935097 - MLT2B3 LTR ERVL -290 264 1 934 212 6 11 chr2 163321486 163321665 -89934918 + MER92B LTR ERV1 44 221 -415 5557 92 19 0 chr2 163321674 163322695 -89933888 - L1PA10 LINE L1 -104 6064 5025 424 316 85 22 chr2 163322736 163323052 -89933531 + MER102b DNA MER1_type 2 337 -4 356 296 108 46 chr2 163324114 163324421 -89932162 + L1ME4a LINE L1 5609 5934 -187 1978 120 7 19 chr2 163327017 163327325 -89929258 + AluSx SINE Alu 1 304 -8 2385 63 10 0 chr2 163328184 163328486 -89928097 + AluY SINE Alu 1 305 -6 386 338 156 50 chr2 163329335 163330235 -89926348 - L2 LINE L2 -505 2809 1815 27 73 0 0 chr2 163330252 163330307 -89926276 + AT_rich Low_complexity Low_complexity 1 55 0 4993 45 0 0 chr2 163330420 163331066 -89925517 - L1P LINE L1 -2455 3691 3046 12419 26 0 0 chr2 163331067 163333300 -89923283 + L1PA3 LINE L1 3918 6152 -3 961 184 105 71 chr2 163333951 163334304 -89922279 - MLT1A1 LTR MaLR 0 365 1 24 0 0 0 chr2 163334634 163334658 -89921925 + AT_rich Low_complexity Low_complexity 1 24 0 258 56 0 0 chr2 163336071 163336107 -89920476 + (GA)n Simple_repeat Simple_repeat 1 36 0 1240 311 94 41 chr2 163336158 163337672 -89918911 + L1MEc LINE L1 36 1629 -4767 316 263 20 20 chr2 163337723 163337822 -89918761 + (CATATA)n Simple_repeat Simple_repeat 5 103 0 350 207 43 50 chr2 163337825 163337965 -89918618 + L1MC4 LINE L1 7904 8042 0 553 245 11 65 chr2 163337969 163338187 -89918396 + L1MEc LINE L1 1633 1861 -4354 1953 126 4 0 chr2 163338187 163338456 -89918127 + AluSg SINE Alu 19 288 -22 553 245 11 65 chr2 163338456 163338637 -89917946 + L1MEc LINE L1 1861 3428 -2787 468 182 10 20 chr2 163338717 163338816 -89917767 + AluSg/x SINE Alu 198 295 -17 220 224 15 0 chr2 163338827 163338894 -89917689 + (TA)n Simple_repeat Simple_repeat 2 69 0 1128 247 85 75 chr2 163338899 163339591 -89916992 + L1MEc LINE L1 4036 4734 -1481 316 211 40 13 chr2 163339895 163339971 -89916612 - LTR33A LTR ERVL -2 521 444 222 246 15 62 chr2 163340364 163340429 -89916154 - L2 LINE L2 -5 3308 3247 2210 99 10 3 chr2 163342358 163342661 -89913922 + AluSc SINE Alu 1 305 -4 488 339 72 15 chr2 163342872 163343067 -89913516 - MIR SINE MIR -52 210 5 218 294 4 0 chr2 163343817 163343883 -89912700 + MIR SINE MIR 36 102 -106 327 275 54 74 chr2 163344354 163344503 -89912080 + L2 LINE L2 3118 3263 -9 22 0 0 0 chr2 163347218 163347240 -89909343 + AT_rich Low_complexity Low_complexity 1 22 0 537 270 70 23 chr2 163348471 163348686 -89907897 + MIR SINE MIR 37 261 -1 812 304 179 23 chr2 163349168 163349975 -89906608 - L2 LINE L2 -1 3312 2332 419 373 74 20 chr2 163350081 163350379 -89906204 - L1MEd LINE L1 -5283 836 523 872 289 138 56 chr2 163350777 163351344 -89905239 - L2 LINE L2 -1042 2272 1623 2142 118 10 0 chr2 163351344 163351650 -89904933 - AluSq SINE Alu -4 309 1 872 289 138 56 chr2 163351650 163351856 -89904727 - L2 LINE L2 -1691 1623 1435 517 259 102 91 chr2 163352018 163352292 -89904291 + L3 LINE CR1 1243 1519 -58 27 73 0 0 chr2 163354371 163354426 -89902157 + AT_rich Low_complexity Low_complexity 1 55 0 370 258 194 45 chr2 163355557 163355712 -89900871 - MIR SINE MIR -70 192 15 4293 185 36 51 chr2 163357042 163357509 -89899074 - L1 LINE L1 -1121 5025 4552 1774 119 119 32 chr2 163357509 163357854 -89898729 + THE1C LTR MaLR 1 375 0 4293 185 36 51 chr2 163357854 163358422 -89898161 - L1 LINE L1 -1594 4552 4006 * 4486 183 42 4 chr2 163358419 163359520 -89897063 + L1MB1 LINE L1 5028 6168 0 28 29 0 0 chr2 163359572 163359607 -89896976 + AT_rich Low_complexity Low_complexity 1 35 0 949 169 38 58 chr2 163359722 163359983 -89896600 + Charlie5 DNA MER1_type 2369 2624 0 33 43 0 0 chr2 163360103 163360150 -89896433 + AT_rich Low_complexity Low_complexity 1 47 0 1874 122 14 14 chr2 163360151 163360439 -89896144 - AluSx SINE Alu -24 288 1 279 306 105 10 chr2 163361177 163361380 -89895203 - L2 LINE L2 0 3313 2754 237 241 139 22 chr2 163361777 163361914 -89894669 + L1ME LINE L1 5709 5861 -260 23 54 0 0 chr2 163362090 163362127 -89894456 + AT_rich Low_complexity Low_complexity 1 37 0 450 173 222 6 chr2 163362131 163362293 -89894290 - MER113 DNA MER1_type? -280 241 45 25 31 0 0 chr2 163362539 163362571 -89894012 + AT_rich Low_complexity Low_complexity 1 32 0 2092 124 0 0 chr2 163362664 163362981 -89893602 + AluSx SINE Alu 1 317 0 532 101 13 0 chr2 163363355 163363434 -89893149 - MADE1 DNA Mariner 0 80 1 245 343 58 36 chr2 163364796 163364933 -89891650 + L2 LINE L2 3133 3272 0 266 294 38 52 chr2 163365027 163365166 -89891417 + MER5A DNA MER1_type 7 161 -28 595 253 98 0 chr2 163365524 163365698 -89890885 - MSTD LTR MaLR -43 353 163 1834 247 62 96 chr2 163365845 163366998 -89889585 - L1MEc LINE L1 -3705 2522 1440 809 137 38 0 chr2 163367034 163367165 -89889418 + MSTC LTR MaLR 1 136 -292 1415 229 37 44 chr2 163367278 163367714 -89888869 + MLT1D LTR MaLR 73 505 0 207 0 0 0 chr2 163368445 163368468 -89888115 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1634 126 76 50 chr2 163368951 163369255 -89887328 + AluSx SINE Alu 1 311 0 2482 193 6 28 chr2 163369322 163369793 -89886790 - MLT2B1 LTR ERVL -57 463 3 2310 88 60 28 chr2 163370453 163370806 -89885777 + THE1B LTR MaLR 1 364 0 11581 93 8 6 chr2 163370806 163372384 -89884199 + THE1B-int LTR MaLR 1 1580 0 1895 139 81 29 chr2 163372384 163372730 -89883853 + THE1B LTR MaLR 1 364 0 24 0 0 0 chr2 163373021 163373045 -89883538 + AT_rich Low_complexity Low_complexity 1 24 0 1541 145 3 82 chr2 163373285 163373456 -89883127 + L1PA16 LINE L1 5874 6057 -109 1976 89 79 34 chr2 163373456 163373747 -89882836 + AluSq SINE Alu 1 304 -9 1541 145 3 82 chr2 163373747 163373760 -89882823 + L1PA16 LINE L1 6057 6069 -97 194 0 39 0 chr2 163373760 163373786 -89882797 + (CAA)n Simple_repeat Simple_repeat 2 28 0 1541 145 3 82 chr2 163373786 163373918 -89882665 + L1PA16 LINE L1 6069 6166 0 1795 157 64 20 chr2 163373963 163374006 -89882577 + MER46B DNA MER2_type 2 42 -2689 4196 68 9 0 chr2 163374006 163374551 -89882032 + L1PA7 LINE L1 5605 6154 0 1795 157 64 20 chr2 163374551 163374852 -89881731 + MER46B DNA MER2_type 42 236 0 734 214 140 84 chr2 163374852 163375137 -89881446 + MLT1A1 LTR MaLR 65 365 0 456 217 38 0 chr2 163375137 163375241 -89881342 - MLT1C LTR MaLR -357 110 3 2254 41 0 0 chr2 163376166 163376436 -89880147 + L1PA3 LINE L1 5883 6152 -3 2127 92 0 4 chr2 163377884 163378156 -89878427 - AluSx SINE Alu 0 312 42 24 32 0 0 chr2 163378383 163378414 -89878169 + AT_rich Low_complexity Low_complexity 1 31 0 703 245 43 59 chr2 163378891 163379150 -89877433 - MIR SINE MIR 0 262 9 351 248 68 3 chr2 163379842 163379977 -89876606 - MER5A DNA MER1_type 0 189 7 261 313 20 10 chr2 163380022 163380121 -89876462 + MER5A DNA MER1_type 39 138 -51 23 33 0 0 chr2 163381049 163381079 -89875504 + AT_rich Low_complexity Low_complexity 1 30 0 186 233 283 0 chr2 163381453 163381513 -89875070 - L2 LINE L2 -2 3270 3194 535 213 67 109 chr2 163381554 163381793 -89874790 - MER112 DNA MER1_type -26 234 6 644 116 0 0 chr2 163381812 163381907 -89874676 + AluSg/x SINE Alu 185 279 -33 193 308 143 30 chr2 163382388 163382521 -89874062 - L2 LINE L2 -665 2649 2502 5479 78 15 1 chr2 163383297 163384044 -89872539 + L1P LINE L1 3880 4636 -1510 302 325 77 62 chr2 163384255 163384449 -89872134 + MIR3 SINE MIR 9 205 -3 294 226 0 0 chr2 163385793 163385846 -89870737 - MER3 DNA MER1_type -114 95 43 205 364 9 27 chr2 163387162 163387272 -89869311 - L2 LINE L2 -215 3057 2950 203 184 0 20 chr2 163387544 163387593 -89868990 + CT-rich Low_complexity Low_complexity 3 50 0 23 0 0 0 chr2 163387978 163388001 -89868582 + AT_rich Low_complexity Low_complexity 1 23 0 379 172 25 16 chr2 163390105 163390227 -89866356 + CT-rich Low_complexity Low_complexity 2 124 0 231 173 0 0 chr2 163390344 163390396 -89866187 + (TTTA)n Simple_repeat Simple_repeat 2 53 0 2434 160 15 26 chr2 163390403 163390871 -89865712 - L1MB7 LINE L1 -21 6163 5701 25171 67 4 3 chr2 163390871 163394995 -89861588 + L1PA6 LINE L1 2018 6148 -6 1327 248 13 0 chr2 163394993 163395299 -89861284 - L1MB7 LINE L1 -467 5711 5402 * 1306 308 25 31 chr2 163395632 163396142 -89860441 - LTR33 LTR ERVL 0 521 15 186 43 0 0 chr2 163396983 163397006 -89859577 + (GA)n Simple_repeat Simple_repeat 2 24 0 267 194 30 15 chr2 163397911 163397978 -89858605 + GA-rich Low_complexity Low_complexity 2 69 0 214 263 0 0 chr2 163399949 163400006 -89856577 + (CATATA)n Simple_repeat Simple_repeat 4 60 0 336 48 0 0 chr2 163400026 163400068 -89856515 + (CA)n Simple_repeat Simple_repeat 2 43 0 1075 209 118 65 chr2 163400184 163400463 -89856120 + MLT1A2 LTR MaLR 1 304 -70 2159 142 3 0 chr2 163400463 163400773 -89855810 - AluSx SINE Alu 0 312 2 1075 209 118 65 chr2 163400773 163400848 -89855735 + MLT1A2 LTR MaLR 304 374 0 221 305 17 69 chr2 163401064 163401238 -89855345 - MIR SINE MIR -52 210 46 458 333 0 0 chr2 163401526 163401643 -89854940 - L2 LINE L2 0 3313 3197 1968 118 34 3 chr2 163403060 163403357 -89853226 + AluSg1 SINE Alu 1 306 -3 226 364 0 0 chr2 163403452 163403540 -89853043 + MER99 DNA DNA 6 93 -735 2579 201 58 53 chr2 163403729 163403923 -89852660 + MER99 DNA DNA 100 291 -537 5745 110 6 26 chr2 163403923 163404811 -89851772 + MER4D LTR ERV1 1 870 -2 2579 201 58 53 chr2 163404811 163405338 -89851245 + MER99 DNA DNA 291 825 -3 1887 151 4 0 chr2 163405519 163405797 -89850786 + AluSp SINE Alu 3 281 -32 23 0 0 0 chr2 163405824 163405847 -89850736 + AT_rich Low_complexity Low_complexity 1 23 0 21 57 0 0 chr2 163405886 163405921 -89850662 + AT_rich Low_complexity Low_complexity 1 35 0 631 289 85 49 chr2 163407163 163407550 -89849033 + MLT1J2 LTR MaLR 1 401 -45 22 35 0 0 chr2 163407713 163407742 -89848841 + AT_rich Low_complexity Low_complexity 1 29 0 1837 104 13 30 chr2 163408007 163408306 -89848277 - MER39B LTR ERV1 -83 570 277 180 77 0 0 chr2 163411096 163411122 -89845461 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 187 250 71 18 chr2 163413660 163413716 -89842867 - MIR SINE MIR -160 102 44 2117 131 0 7 chr2 163413960 163414266 -89842317 + AluJb SINE Alu 1 304 -8 527 291 62 75 chr2 163415085 163415501 -89841082 - L1MEc LINE L1 -4307 2089 1679 672 229 71 28 chr2 163415543 163415796 -89840787 - L1MEc LINE L1 -5117 1088 825 40 0 0 0 chr2 163415816 163415856 -89840727 + AT_rich Low_complexity Low_complexity 1 40 0 386 261 42 17 chr2 163415880 163415999 -89840584 - L1M3c LINE L1 -5697 444 323 747 270 22 14 chr2 163416005 163416227 -89840356 - L1M3c LINE L1 -5912 229 6 2089 253 59 17 chr2 163416232 163418332 -89838251 - L1MEc LINE L1 -2295 3920 1595 36249 65 2 6 chr2 163418497 163424041 -89832542 - L1PA5 LINE L1 -2 6152 630 575 291 102 23 chr2 163424047 163425147 -89831436 - L1MEc LINE L1 -4996 1400 56 2988 247 41 24 chr2 163426218 163427407 -89829176 + L1M3c LINE L1 2108 3043 -4522 2181 115 3 10 chr2 163427407 163427712 -89828871 - AluSg SINE Alu -3 307 5 2988 247 41 24 chr2 163427712 163428118 -89828465 + L1M3c LINE L1 3043 3441 -4124 4514 291 20 22 chr2 163428182 163429722 -89826861 + L1PBa LINE L1 7 1543 -5320 12267 194 32 58 chr2 163429730 163429753 -89826830 + L1PB3 LINE L1 642 664 -5547 2144 119 0 0 chr2 163429753 163430038 -89826545 + AluSx SINE Alu 1 285 -27 12267 194 32 58 chr2 163430038 163431739 -89824844 + L1PB3 LINE L1 664 2407 -3804 2036 128 17 0 chr2 163431739 163432036 -89824547 + AluSg SINE Alu 1 302 -8 12267 194 32 58 chr2 163432036 163433394 -89823189 + L1PB3 LINE L1 2407 3798 -2413 987 214 0 0 chr2 163433394 163433581 -89823002 + AluSg/x SINE Alu 117 303 -9 12267 194 32 58 chr2 163433581 163435959 -89820624 + L1PB3 LINE L1 3798 6203 -8 1424 248 49 24 chr2 163435986 163436129 -89820454 + L1ME1 LINE L1 2133 2271 -3944 1330 204 85 4 chr2 163436129 163436428 -89820155 + AluJo SINE Alu 1 320 0 1424 248 49 24 chr2 163436428 163436818 -89819765 + L1ME1 LINE L1 2271 2642 -3573 * 2367 220 24 37 chr2 163436814 163437437 -89819146 + L1MA10 LINE L1 5719 6333 -1 4173 247 63 9 chr2 163437449 163438584 -89817999 + L1ME1 LINE L1 3919 5169 -1117 2346 82 0 3 chr2 163438584 163438890 -89817693 + AluY SINE Alu 1 305 -6 4173 247 63 9 chr2 163438890 163439287 -89817296 + L1ME1 LINE L1 5169 5543 -743 825 272 10 9 chr2 163439288 163439526 -89817057 - L1ME LINE L1 -462 5704 5472 290 115 0 82 chr2 163439516 163439577 -89817006 - L1PB1 LINE L1 0 6151 6096 * 2293 94 0 3 chr2 163439577 163439876 -89816707 - AluY SINE Alu -13 298 1 702 210 7 0 chr2 163439920 163440063 -89816520 - AluY SINE Alu -30 281 138 2367 237 93 18 chr2 163440163 163440948 -89815635 - L1PBa LINE L1 -6014 849 6 231 254 0 66 chr2 163441040 163441162 -89815421 + GA-rich Low_complexity Low_complexity 4 117 0 195 42 0 0 chr2 163441179 163441203 -89815380 + (GAAAA)n Simple_repeat Simple_repeat 3 26 0 24 0 0 0 chr2 163441462 163441486 -89815097 + AT_rich Low_complexity Low_complexity 1 24 0 404 301 23 53 chr2 163443454 163443587 -89812996 + MIR SINE MIR 23 151 -111 212 333 194 22 chr2 163443786 163444152 -89812431 + L2 LINE L2 2832 3260 -12 216 0 0 0 chr2 163445171 163445195 -89811388 + (A)n Simple_repeat Simple_repeat 1 24 0 436 193 0 0 chr2 163445849 163445932 -89810651 - AluY SINE Alu -228 83 1 2507 50 7 0 chr2 163445951 163446253 -89810330 - AluY SINE Alu -7 304 1 5573 163 32 73 chr2 163446254 163447348 -89809235 - L1PB1 LINE L1 -44 6107 5008 1123 84 36 54 chr2 163447348 163447515 -89809068 - AluSg/x SINE Alu -24 286 123 5573 163 32 73 chr2 163447515 163448483 -89808100 - L1PB1 LINE L1 -1143 5008 4002 266 192 41 14 chr2 163448483 163448556 -89808027 - L1ME1 LINE L1 -2534 5577 5503 * 2053 243 61 14 chr2 163448553 163449178 -89807405 + L1ME1 LINE L1 5563 6216 -19 518 196 135 0 chr2 163449209 163449342 -89807241 + L1ME1 LINE L1 5281 5431 -747 588 207 20 154 chr2 163449345 163449650 -89806933 + L1ME1 LINE L1 5831 6094 -72 460 214 166 0 chr2 163449561 163449706 -89806877 + L1MA10 LINE L1 6164 6332 -2 * 275 284 54 0 chr2 163451022 163451096 -89805487 - MIR SINE MIR -184 78 1 659 265 19 72 chr2 163451103 163451367 -89805216 - MIR SINE MIR 0 262 13 2148 100 3 13 chr2 163451469 163451769 -89804814 - AluY SINE Alu -14 297 1 24 32 0 0 chr2 163451825 163451856 -89804727 + AT_rich Low_complexity Low_complexity 1 31 0 2247 264 22 9 chr2 163452021 163452571 -89804012 + L1P4 LINE L1 6 562 -7019 * 16833 227 44 21 chr2 163452569 163452858 -89803725 + L1P4 LINE L1 969 1250 -6353 3084 175 28 51 chr2 163452858 163453565 -89803018 + LTR8 LTR ERV1 1 691 0 16833 227 44 21 chr2 163453565 163454263 -89802320 + L1P4 LINE L1 1250 1931 -5672 2423 106 56 0 chr2 163454263 163454620 -89801963 + MER51B LTR ERV1 1 377 0 16833 227 44 21 chr2 163454620 163458320 -89798263 + L1P4 LINE L1 1931 5545 -2058 198 0 0 0 chr2 163458320 163458342 -89798241 + (TA)n Simple_repeat Simple_repeat 2 23 0 16833 227 44 21 chr2 163458342 163458899 -89797684 + L1P4 LINE L1 5545 6088 -1515 1615 171 128 50 chr2 163458899 163459296 -89797287 - MSTA LTR MaLR 0 428 1 16833 227 44 21 chr2 163459296 163459977 -89796606 + L1P4 LINE L1 6088 7084 -519 225 362 133 0 chr2 163461117 163461222 -89795361 - L2 LINE L2 -6 3266 3148 219 36 0 0 chr2 163461319 163461347 -89795236 + (CA)n Simple_repeat Simple_repeat 2 29 0 2218 93 36 0 chr2 163461883 163462185 -89794398 - AluSp SINE Alu 0 313 1 297 278 155 0 chr2 163462246 163462343 -89794240 + MIR SINE MIR 57 168 -94 583 304 89 5 chr2 163463506 163463720 -89792863 + MIR SINE MIR 12 243 -19 396 293 28 71 chr2 163463946 163464158 -89792425 + MIR SINE MIR 18 220 -42 25 0 0 0 chr2 163464485 163464510 -89792073 + AT_rich Low_complexity Low_complexity 1 25 0 14848 211 11 6 chr2 163464707 163469086 -89787497 - L1PB1 LINE L1 -14 6137 1766 249 397 71 12 chr2 163469230 163469570 -89787013 + L3 LINE CR1 621 980 -597 4018 84 0 25 chr2 163469590 163470158 -89786425 + MER41A LTR ERV1 1 554 0 276 237 51 17 chr2 163470204 163470322 -89786261 + MER103 DNA DNA 45 166 0 500 311 46 20 chr2 163470325 163470521 -89786062 + MIR SINE MIR 53 253 -9 1013 289 39 72 chr2 163470822 163471307 -89785276 + L3 LINE CR1 1108 1576 -1 274 238 95 29 chr2 163471702 163471807 -89784776 - L2 LINE L2 -1 3271 3160 246 32 0 0 chr2 163472422 163472453 -89784130 + (CA)n Simple_repeat Simple_repeat 2 32 0 922 269 16 0 chr2 163472615 163472871 -89783712 + MIR SINE MIR 3 262 0 387 293 86 14 chr2 163473014 163473154 -89783429 + MER5A DNA MER1_type 35 184 -5 402 307 69 37 chr2 163473220 163473438 -89783145 - MIR SINE MIR -28 234 10 483 285 108 27 chr2 163474021 163474207 -89782376 - MIR SINE MIR -15 247 47 21 0 0 0 chr2 163474725 163474746 -89781837 + AT_rich Low_complexity Low_complexity 1 21 0 185 286 17 101 chr2 163474840 163474959 -89781624 - L2 LINE L2 -619 2695 2587 198 333 152 0 chr2 163476470 163476608 -89779975 - MIR SINE MIR -27 235 77 463 254 35 28 chr2 163476649 163476791 -89779792 - MIR SINE MIR -1 261 119 746 319 24 27 chr2 163476881 163477176 -89779407 + MLT1K LTR MaLR 137 430 -158 2007 102 88 0 chr2 163477727 163478010 -89778573 + AluSg SINE Alu 1 308 -2 1894 172 122 45 chr2 163478048 163478222 -89778361 - MLT1D LTR MaLR -3 502 343 1129 142 42 84 chr2 163478222 163478461 -89778122 - MER30 DNA MER1_type -1 229 1 1894 172 122 45 chr2 163478461 163478752 -89777831 - MLT1D LTR MaLR -162 343 1 2092 143 0 0 chr2 163478856 163479157 -89777426 - AluSx SINE Alu -11 301 1 1438 223 83 54 chr2 163480132 163480728 -89775855 + MLT2F LTR ERVL 5 663 0 1977 129 0 4 chr2 163481123 163481401 -89775182 + AluSp SINE Alu 1 277 -36 707 293 0 16 chr2 163482453 163482641 -89773942 + MIR SINE MIR 73 257 -5 31 26 0 0 chr2 163482907 163482945 -89773638 + AT_rich Low_complexity Low_complexity 1 38 0 225 180 0 0 chr2 163482950 163483000 -89773583 + (TATATG)n Simple_repeat Simple_repeat 3 52 0 289 360 83 31 chr2 163483003 163483353 -89773230 - L2 LINE L2 -17 3296 2929 255 333 34 17 chr2 163484783 163484900 -89771683 + MIR SINE MIR 44 162 -100 22 35 0 0 chr2 163485047 163485076 -89771507 + AT_rich Low_complexity Low_complexity 1 29 0 22 70 0 0 chr2 163485229 163485272 -89771311 + AT_rich Low_complexity Low_complexity 1 43 0 2212 98 14 0 chr2 163485751 163485919 -89770664 - AluSq SINE Alu -14 299 124 243 0 0 0 chr2 163485919 163485946 -89770637 + (TG)n Simple_repeat Simple_repeat 2 28 0 2212 98 14 0 chr2 163485946 163486072 -89770511 - AluSq SINE Alu -189 124 1 381 43 0 0 chr2 163487766 163487813 -89768770 + (TG)n Simple_repeat Simple_repeat 1 47 0 343 296 134 0 chr2 163487944 163488086 -89768497 - MER103 DNA DNA 0 166 6 207 167 0 0 chr2 163488472 163488514 -89768069 + (ATG)n Simple_repeat Simple_repeat 3 44 0 233 116 0 23 chr2 163492841 163492884 -89763699 + (TA)n Simple_repeat Simple_repeat 2 43 0 1628 241 25 84 chr2 163493638 163494289 -89762294 + LTR9 LTR ERV1 1 612 0 301 322 103 50 chr2 163494626 163494868 -89761715 + MIR SINE MIR 2 256 -6 2239 106 0 0 chr2 163494957 163495241 -89761342 - AluSg SINE Alu -24 286 3 1813 153 50 29 chr2 163496590 163496930 -89759653 - MER7A DNA MER2_type -1 345 1 290 293 64 50 chr2 163497304 163497444 -89759139 + MIR3 SINE MIR 40 181 -27 23 0 0 0 chr2 163497762 163497785 -89758798 + AT_rich Low_complexity Low_complexity 1 23 0 219 36 0 0 chr2 163500010 163500038 -89756545 + (TC)n Simple_repeat Simple_repeat 1 28 0 745 258 45 5 chr2 163500633 163500831 -89755752 + MER63A DNA MER1_type 1 206 -4 21 36 0 0 chr2 163501109 163501137 -89755446 + AT_rich Low_complexity Low_complexity 1 28 0 366 314 164 23 chr2 163501546 163501766 -89754817 + MIR SINE MIR 7 257 -5 437 231 184 0 chr2 163502391 163502538 -89754045 + MER5A DNA MER1_type 13 186 -3 376 313 119 48 chr2 163503820 163504047 -89752536 - MIR SINE MIR -1 261 19 504 327 195 29 chr2 163505247 163505831 -89750752 + L1MEd LINE L1 98 778 -5341 401 268 78 13 chr2 163505995 163506148 -89750435 + MER103 DNA DNA 3 165 -1 238 229 66 0 chr2 163507563 163507624 -89748959 + MER116 DNA Mariner 3 67 -13 198 118 0 0 chr2 163508326 163508360 -89748223 + (GGAA)n Simple_repeat Simple_repeat 2 35 0 548 312 112 27 chr2 163508360 163508854 -89747729 + L2 LINE L2 2771 3313 0 210 300 80 20 chr2 163510767 163510867 -89745716 - MIR SINE MIR -10 252 147 756 120 0 16 chr2 163510883 163511008 -89745575 + 7SK RNA RNA 1 123 -70 387 141 16 0 chr2 163511095 163511159 -89745424 + 7SK RNA RNA 129 193 0 4013 104 27 22 chr2 163511278 163511914 -89744669 - MER51C LTR ERV1 -1 639 1 547 278 90 19 chr2 163511943 163512155 -89744428 - MIR SINE MIR -7 255 29 350 327 188 5 chr2 163512507 163512709 -89743874 + MIR SINE MIR 16 254 -8 747 182 29 12 chr2 163514874 163515044 -89741539 + L1MB2 LINE L1 5992 6164 -7 402 0 17 33 chr2 163515217 163515277 -89741306 + (TG)n Simple_repeat Simple_repeat 1 59 0 2061 214 81 31 chr2 163515302 163515922 -89740661 + MER76 LTR ERV 11 661 -27 643 338 30 4 chr2 163515940 163516171 -89740412 - MIR SINE MIR -6 256 20 1849 187 16 22 chr2 163516527 163516890 -89739693 + MLT1A1 LTR MaLR 5 365 0 2063 128 7 0 chr2 163517039 163517328 -89739255 + AluSc SINE Alu 1 291 -18 205 276 103 0 chr2 163517851 163517909 -89738674 + MIR SINE MIR 57 120 -142 1476 88 22 0 chr2 163518007 163518233 -89738350 - L1MA5 LINE L1 -4 6296 6066 304 212 221 26 chr2 163519745 163519858 -89736725 + MER5C DNA MER1_type 2 136 -188 343 225 169 0 chr2 163519863 163519952 -89736631 + L1MC4 LINE L1 6600 6703 -1339 2283 82 10 7 chr2 163519955 163520249 -89736334 - AluSq SINE Alu -18 295 1 338 230 163 0 chr2 163520269 163520404 -89736179 + MER5C DNA MER1_type 165 321 -3 350 298 102 38 chr2 163520450 163520685 -89735898 - MER112 DNA MER1_type -10 250 1 1203 351 83 8 chr2 163520957 163521583 -89735000 + L2 LINE L2 2305 2977 -337 808 301 23 0 chr2 163521980 163522199 -89734384 + MIR SINE MIR 9 232 -30 403 196 72 0 chr2 163522455 163522552 -89734031 + L1MC4 LINE L1 6914 7017 -1025 186 154 31 31 chr2 163522600 163522665 -89733918 + GA-rich Low_complexity Low_complexity 3 67 0 268 261 161 22 chr2 163522775 163522955 -89733628 + L1MC4a LINE L1 7146 7350 -458 396 0 0 0 chr2 163523093 163523137 -89733446 + (CA)n Simple_repeat Simple_repeat 2 45 0 2195 84 3 0 chr2 163523249 163523534 -89733049 + AluY SINE Alu 21 306 -5 483 263 19 54 chr2 163523599 163523858 -89732725 + L1MC4 LINE L1 7792 8041 -1 512 242 186 21 chr2 163524423 163524617 -89731966 + MER69 DNA AcHobo 161 386 -2140 363 182 0 0 chr2 163524631 163524697 -89731886 + MER69 DNA AcHobo 2460 2525 -1 458 242 81 7 chr2 163526133 163526282 -89730301 + MIR SINE MIR 100 259 -3 380 284 73 18 chr2 163526823 163526932 -89729651 - MIR SINE MIR -116 146 32 240 346 168 20 chr2 163527299 163527501 -89729082 + MIR SINE MIR 23 254 -8 187 307 53 0 chr2 163527577 163527652 -89728931 - MER5A DNA MER1_type -50 139 61 211 204 0 0 chr2 163527658 163527707 -89728876 + (CAAA)n Simple_repeat Simple_repeat 4 52 0 21 0 0 0 chr2 163527788 163527809 -89728774 + AT_rich Low_complexity Low_complexity 1 21 0 1944 184 2 137 chr2 163528056 163528398 -89728185 - MLT1D-int LTR MaLR -822 549 162 281 220 0 0 chr2 163528398 163528474 -89728109 - AluS SINE Alu 0 306 231 1944 184 2 137 chr2 163528474 163528637 -89727946 - MLT1D-int LTR MaLR -1209 162 88 2469 152 18 39 chr2 163528637 163528685 -89727898 - MSTB LTR MaLR 0 426 379 1887 107 0 30 chr2 163528685 163528979 -89727604 + AluSx SINE Alu 20 305 0 2469 152 18 39 chr2 163528979 163529363 -89727220 - MSTB LTR MaLR -47 379 1 1944 184 2 137 chr2 163529363 163529440 -89727143 - MLT1D-int LTR MaLR -1283 88 2 787 206 186 90 chr2 163529441 163529887 -89726696 - MLT1D LTR MaLR 0 505 17 982 112 0 8 chr2 163529933 163530067 -89726516 + AluSp SINE Alu 1 133 -180 35943 85 12 11 chr2 163530080 163536208 -89720375 + L1PA6 LINE L1 11 6144 -10 1417 104 0 5 chr2 163536208 163536401 -89720182 + AluSp SINE Alu 121 312 -1 4398 114 39 24 chr2 163536936 163537649 -89718934 + L1PA16 LINE L1 5434 6157 -9 788 301 169 43 chr2 163537905 163538915 -89717668 + L2 LINE L2 1939 3136 -177 2172 78 46 3 chr2 163538915 163539198 -89717385 - AluY SINE Alu -16 295 1 788 301 169 43 chr2 163539198 163539402 -89717181 + L2 LINE L2 3136 3313 0 435 326 22 13 chr2 163541345 163541544 -89715039 + MIR SINE MIR 9 206 -56 290 313 99 30 chr2 163542569 163542700 -89713883 + MIR3 SINE MIR 65 204 -4 212 316 166 43 chr2 163542753 163542892 -89713691 + L2 LINE L2 2702 2857 -457 355 321 46 4 chr2 163543366 163543531 -89713052 + MIR SINE MIR 17 185 -67 206 191 0 32 chr2 163543537 163543600 -89712983 + (CATA)n Simple_repeat Simple_repeat 2 62 0 329 304 29 66 chr2 163543754 163543987 -89712596 + MIR SINE MIR 5 228 -34 377 285 24 32 chr2 163544080 163544203 -89712380 + MIR SINE MIR 103 224 -38 24 0 0 0 chr2 163544840 163544864 -89711719 + AT_rich Low_complexity Low_complexity 1 24 0 5921 146 9 43 chr2 163544968 163546114 -89710469 - HERVH LTR ERV1 -5834 1879 773 1462 191 108 8 chr2 163546126 163546488 -89710095 - HERVH LTR ERV1 -7315 398 1 1902 164 37 20 chr2 163546488 163546896 -89709687 - LTR7 LTR ERV1 0 450 36 7867 168 6 9 chr2 163546922 163548427 -89708156 + HERVH LTR ERV1 6214 7713 0 2304 134 43 25 chr2 163548429 163548869 -89707714 + LTR7 LTR ERV1 3 450 0 3266 222 90 46 chr2 163548869 163550585 -89705998 + L1MCb LINE L1 7 1801 -4763 2205 134 3 0 chr2 163550585 163550891 -89705692 + AluSx SINE Alu 1 307 -5 358 111 4 2 chr2 163550891 163551135 -89705448 + AluSp SINE Alu 1 302 -1 312 213 38 0 chr2 163551135 163551215 -89705368 + L1M1 LINE L1 2907 2989 -4576 349 358 159 12 chr2 163551331 163551658 -89704925 - L3 LINE CR1 -1070 507 133 281 258 61 0 chr2 163552491 163552597 -89703986 + MIR SINE MIR 45 162 -46 966 242 56 3 chr2 163552680 163552986 -89703597 - MER113 DNA MER1_type? -34 487 166 839 139 0 0 chr2 163552996 163553125 -89703458 - AluSg/x SINE Alu 0 312 184 226 231 108 15 chr2 163553128 163553258 -89703325 - MER113 DNA MER1_type? -378 143 2 32 0 0 0 chr2 163553307 163553339 -89703244 + AT_rich Low_complexity Low_complexity 1 32 0 414 266 48 20 chr2 163554638 163554797 -89701786 - MIR SINE MIR -55 207 45 993 175 42 23 chr2 163555064 163555281 -89701302 + Tigger1 DNA MER2_type 1 221 -2197 1024 159 0 40 chr2 163555292 163555468 -89701115 - AluJb SINE Alu -6 306 138 759 109 0 34 chr2 163555471 163555590 -89700993 + Tigger1 DNA MER2_type 219 333 -2085 1755 198 29 8 chr2 163555625 163555999 -89700584 + Tigger1 DNA MER2_type 277 658 -1760 * 2942 131 4 25 chr2 163555989 163556259 -89700324 + Tigger1 DNA MER2_type 987 1244 -1174 2104 134 3 0 chr2 163556259 163556551 -89700032 - AluSp SINE Alu -19 294 2 2942 131 4 25 chr2 163556551 163556767 -89699816 + Tigger1 DNA MER2_type 1244 1463 -955 1079 190 5 15 chr2 163556769 163556969 -89699614 - AluJb SINE Alu -80 232 35 5953 122 8 8 chr2 163556969 163557192 -89699391 + Tigger1 DNA MER2_type 1449 1671 -747 2011 126 44 47 chr2 163557192 163557557 -89699026 - THE1B LTR MaLR 0 364 1 5953 122 8 8 chr2 163557557 163558303 -89698280 + Tigger1 DNA MER2_type 1670 2418 0 243 0 0 0 chr2 163558303 163558330 -89698253 + (TA)n Simple_repeat Simple_repeat 2 28 0 259 250 28 0 chr2 163560795 163560867 -89695716 - MIR SINE MIR -95 167 94 232 255 202 24 chr2 163560892 163561100 -89695483 + LTR33A LTR ERVL 3 247 -276 475 331 39 0 chr2 163561951 163562129 -89694454 - MIR SINE MIR 0 262 78 428 318 158 50 chr2 163562375 163562989 -89693594 + L3 LINE CR1 739 1418 -159 1795 147 50 0 chr2 163563445 163563724 -89692859 - AluJb SINE Alu -17 295 3 265 347 32 0 chr2 163563966 163564061 -89692522 + L3 LINE CR1 1469 1566 -11 2373 125 13 19 chr2 163564171 163564548 -89692035 + THE1C LTR MaLR 1 375 0 9315 113 72 42 chr2 163564548 163566082 -89690501 + THE1C-int LTR MaLR 1 1580 0 2309 134 11 26 chr2 163566082 163566463 -89690120 + THE1C LTR MaLR 1 375 0 211 300 88 12 chr2 163566613 163566693 -89689890 + MIR3 SINE MIR 87 172 -36 853 291 93 70 chr2 163567483 163568313 -89688270 - L2 LINE L2 0 3313 2462 208 291 0 13 chr2 163568698 163568777 -89687806 + A-rich Low_complexity Low_complexity 4 81 0 234 191 0 21 chr2 163569113 163569160 -89687423 + CT-rich Low_complexity Low_complexity 3 48 0 368 320 40 15 chr2 163570073 163570244 -89686339 + MIR SINE MIR 17 190 -62 1669 190 10 0 chr2 163570431 163570726 -89685857 + AluJo SINE Alu 1 298 -14 508 281 214 0 chr2 163571174 163571384 -89685199 - MIR SINE MIR -5 257 3 577 281 35 30 chr2 163571752 163571955 -89684628 - MIR SINE MIR -10 252 49 42919 33 21 1 chr2 163571955 163577986 -89678597 + L1PA2 LINE L1 1 6154 -1 2109 145 99 18 chr2 163578090 163578484 -89678099 - MSTA LTR MaLR 0 428 3 2574 145 7 5 chr2 163578488 163578902 -89677681 - MSTA-int LTR MaLR 0 1651 1237 * 5531 172 85 1 chr2 163578896 163579910 -89676673 - MSTA-int LTR MaLR -552 1099 1 1209 138 61 22 chr2 163579910 163580141 -89676442 - MSTA LTR MaLR 0 428 189 2317 85 0 0 chr2 163580141 163580435 -89676148 - AluY SINE Alu -17 294 1 937 179 6 6 chr2 163581723 163581902 -89674681 + L1 LINE L1 3559 3737 -2409 276 242 0 0 chr2 163583166 163583228 -89673355 + CT-rich Low_complexity Low_complexity 3 64 0 2560 191 2 12 chr2 163583923 163584430 -89672153 + L1 LINE L1 3727 4228 -1918 940 196 29 0 chr2 163584441 163584645 -89671938 + L1 LINE L1 5057 5266 -880 * 6084 129 38 5 chr2 163584640 163585742 -89670841 + L1MA5A LINE L1 5156 6293 -4 1647 167 0 8 chr2 163585967 163586231 -89670352 + AluJb SINE Alu 40 301 -11 1534 125 0 9 chr2 163586270 163586502 -89670081 + MER30 DNA MER1_type 1 230 0 24 32 0 0 chr2 163586964 163586995 -89669588 + AT_rich Low_complexity Low_complexity 1 31 0 450 268 106 24 chr2 163587064 163587393 -89669190 + L1M4 LINE L1 2209 2564 -3582 6293 133 4 4 chr2 163587580 163588576 -89668007 + L1PA8A LINE L1 4008 5003 -1143 4456 117 91 56 chr2 163588582 163588809 -89667774 + L1PA8A LINE L1 5264 5482 -649 2264 100 7 3 chr2 163588809 163589109 -89667474 + AluSq SINE Alu 1 301 -12 4456 117 91 56 chr2 163589109 163589720 -89666863 + L1PA8A LINE L1 5482 6131 0 636 133 9 44 chr2 163589723 163589836 -89666747 + L1M1 LINE L1 118 226 -7339 10957 113 24 3 chr2 163589840 163591576 -89665007 + L1M1 LINE L1 1845 3617 -3948 6283 99 5 2 chr2 163591776 163593133 -89663450 - L1PA14 LINE L1 0 6161 4799 252 0 0 0 chr2 163593150 163593178 -89663405 + (TTA)n Simple_repeat Simple_repeat 3 30 0 2837 18 0 0 chr2 163593178 163593504 -89663079 - L1PA3 LINE L1 -18 6137 5812 13274 189 17 3 chr2 163593505 163596154 -89660429 - L1PA14 LINE L1 -1364 4782 2096 313 278 62 57 chr2 163596547 163596723 -89659860 + L1ME4a LINE L1 5839 6015 -106 27 29 0 0 chr2 163596751 163596785 -89659798 + AT_rich Low_complexity Low_complexity 1 34 0 180 310 23 85 chr2 163598694 163598823 -89657760 - L2 LINE L2 -588 2726 2606 516 285 129 46 chr2 163598831 163598970 -89657613 + Charlie8 DNA MER1_type 2 128 -213 1583 193 0 27 chr2 163598970 163599265 -89657318 + AluJb SINE Alu 1 287 -25 516 285 129 46 chr2 163599265 163599388 -89657195 + Charlie8 DNA MER1_type 128 286 -55 284 301 0 0 chr2 163600062 163600145 -89656438 + (TA)n Simple_repeat Simple_repeat 1 83 0 233 127 0 36 chr2 163600530 163600540 -89656043 + (TTTTC)n Simple_repeat Simple_repeat 2 11 -43 2915 69 0 65 chr2 163600540 163600973 -89655610 - L1PA5 LINE L1 0 6154 5750 233 127 0 36 chr2 163600973 163601017 -89655566 + (TTTTC)n Simple_repeat Simple_repeat 11 54 0 40344 70 9 1 chr2 163601019 163607121 -89649462 - L1PA3 LINE L1 -3 6152 2 425 341 24 12 chr2 163607754 163607918 -89648665 + MER5A DNA MER1_type 2 167 -22 367 249 52 92 chr2 163607787 163607960 -89648623 - MER5A DNA MER1_type -22 167 2 * 21 57 0 0 chr2 163608220 163608255 -89648328 + AT_rich Low_complexity Low_complexity 1 35 0 7508 28 27 11 chr2 163608278 163609414 -89647169 - L1PA4 LINE L1 -2 6153 5025 3024 251 43 7 chr2 163609421 163610424 -89646159 - L1M4 LINE L1 -2887 3259 2221 1026 171 31 61 chr2 163610448 163610597 -89645986 - L1MCa LINE L1 -6187 239 98 2330 104 0 0 chr2 163610597 163610906 -89645677 - AluSg1 SINE Alu 0 309 1 1026 171 31 61 chr2 163610906 163610984 -89645599 - L1MCa LINE L1 -6328 98 19 2472 57 0 0 chr2 163610989 163611286 -89645297 - AluY SINE Alu -14 297 1 36 70 0 0 chr2 163611300 163611371 -89645212 + AT_rich Low_complexity Low_complexity 1 71 0 7217 182 83 82 chr2 163611454 163612061 -89644522 - L1MC3 LINE L1 0 7768 7163 283 350 0 0 chr2 163612061 163612158 -89644425 - MLT1F1 LTR MaLR -436 131 35 7217 182 83 82 chr2 163612158 163613475 -89643108 - L1MC3 LINE L1 -605 7163 5746 3650 236 90 10 chr2 163613473 163614640 -89641943 - L1MC3 LINE L1 -919 5210 3951 * 317 295 67 47 chr2 163614680 163614829 -89641754 - L1MC3 LINE L1 -5346 773 622 1271 269 96 45 chr2 163615165 163615692 -89640891 + MLT1E LTR MaLR 1 560 -33 2265 119 0 0 chr2 163615692 163616003 -89640580 - AluSq SINE Alu -1 312 2 1271 269 96 45 chr2 163616003 163616037 -89640546 + MLT1E LTR MaLR 560 591 -2 228 111 0 0 chr2 163616164 163616200 -89640383 + (GA)n Simple_repeat Simple_repeat 2 37 0 275 283 105 11 chr2 163617532 163617669 -89638914 + MIR SINE MIR 28 186 -76 315 0 0 0 chr2 163618000 163618035 -89638548 + (GA)n Simple_repeat Simple_repeat 2 36 0 22 35 0 0 chr2 163619786 163619815 -89636768 + AT_rich Low_complexity Low_complexity 1 29 0 24 32 0 0 chr2 163620020 163620051 -89636532 + AT_rich Low_complexity Low_complexity 1 31 0 234 0 0 0 chr2 163620398 163620424 -89636159 + (GA)n Simple_repeat Simple_repeat 1 26 0 21 0 0 0 chr2 163621040 163621061 -89635522 + AT_rich Low_complexity Low_complexity 1 21 0 26 30 0 0 chr2 163622014 163622047 -89634536 + AT_rich Low_complexity Low_complexity 1 33 0 25 65 0 0 chr2 163622248 163622294 -89634289 + AT_rich Low_complexity Low_complexity 1 46 0 521 277 84 0 chr2 163622306 163622472 -89634111 + MIR SINE MIR 72 251 -11 1515 103 23 5 chr2 163622496 163622710 -89633873 - AluSg SINE Alu -92 218 1 1464 170 27 88 chr2 163623471 163623651 -89632932 + AluJo SINE Alu 1 154 -158 2086 142 0 0 chr2 163623651 163623947 -89632636 + AluSq SINE Alu 1 296 -17 1464 170 27 88 chr2 163623947 163624095 -89632488 + AluJo SINE Alu 154 309 -3 315 200 0 31 chr2 163624661 163624726 -89631857 + L2 LINE L2 3206 3268 -4 2376 81 0 7 chr2 163625803 163626110 -89630473 + AluSq SINE Alu 1 305 -8 414 293 115 44 chr2 163626178 163626971 -89629612 + L1MEd LINE L1 835 3504 -2625 691 278 109 54 chr2 163627001 163627960 -89628623 + L1MEd LINE L1 3572 4583 -1546 853 204 7 0 chr2 163627961 163628113 -89628470 + FRAM SINE Alu 1 152 -24 567 255 22 54 chr2 163628251 163628529 -89628054 + L1MEd LINE L1 4768 5036 -1093 259 276 26 35 chr2 163628579 163628695 -89627888 + L1MCa LINE L1 1575 1689 -4737 311 309 61 24 chr2 163629304 163629469 -89627114 + L1M4 LINE L1 4099 4269 -1877 295 336 0 84 chr2 163631180 163631311 -89625272 - L2 LINE L2 -2 3311 3192 526 259 98 11 chr2 163632342 163632516 -89624067 + MIR SINE MIR 14 202 -60 706 350 90 28 chr2 163632517 163633043 -89623540 + L2 LINE L2 2754 3311 -2 2550 56 0 0 chr2 163633159 163633463 -89623120 + AluY SINE Alu 1 304 -7 278 287 37 28 chr2 163635377 163635485 -89621098 - L3 LINE CR1 -2 1575 1467 232 307 34 0 chr2 163635898 163635986 -89620597 - MIR SINE MIR -12 250 160 243 103 0 0 chr2 163637974 163638013 -89618570 + (TG)n Simple_repeat Simple_repeat 2 40 0 225 0 0 0 chr2 163638835 163638860 -89617723 + (A)n Simple_repeat Simple_repeat 1 25 0 352 234 25 21 chr2 163641383 163641665 -89614918 + (TA)n Simple_repeat Simple_repeat 1 283 0 316 151 6 164 chr2 163641695 163641854 -89614729 - L1MA7 LINE L1 -2 6289 6156 197 400 83 8 chr2 163643076 163643196 -89613387 - L2 LINE L2 -36 3236 3108 359 338 86 7 chr2 163643268 163643407 -89613176 + MIR3 SINE MIR 36 185 -23 2039 149 3 0 chr2 163644665 163644973 -89611610 + AluSx SINE Alu 1 309 -3 1658 244 86 59 chr2 163645076 163645759 -89610824 + MER50 LTR ERV1 14 715 -19 607 272 100 35 chr2 163646132 163646422 -89610161 - L2 LINE L2 0 3313 3005 750 272 40 24 chr2 163646945 163647369 -89609214 + L1MCa LINE L1 2313 2750 -3676 21 71 0 0 chr2 163647637 163647679 -89608904 + AT_rich Low_complexity Low_complexity 1 42 0 244 287 75 0 chr2 163647771 163647865 -89608718 - MIR SINE MIR -1 261 161 * 285 348 102 13 chr2 163647859 163648156 -89608427 - L2 LINE L2 -255 3017 2685 440 371 22 22 chr2 163648330 163648508 -89608075 - MIR3 SINE MIR -15 193 16 266 358 42 0 chr2 163648877 163648997 -89607586 + L3 LINE CR1 1447 1571 -6 243 286 100 0 chr2 163650405 163650475 -89606108 - MER2 DNA MER2_type 0 345 269 1114 133 18 89 chr2 163650525 163650750 -89605833 - MER2 DNA MER2_type -135 210 2 521 229 229 7 chr2 163650756 163650909 -89605674 - MIR SINE MIR -69 193 7 24 53 0 0 chr2 163651670 163651708 -89604875 + AT_rich Low_complexity Low_complexity 1 38 0 1254 225 81 75 chr2 163652096 163652590 -89603993 - MLT1D LTR MaLR -8 497 1 7176 202 134 27 chr2 163654092 163655678 -89600905 - MER52A LTR ERV1 0 1755 1 1960 194 44 70 chr2 163656650 163657176 -89599407 + MLT2B3 LTR ERVL 1 512 -42 261 305 11 11 chr2 163657177 163657272 -89599311 + (TATATG)n Simple_repeat Simple_repeat 2 96 0 892 194 6 0 chr2 163657272 163657437 -89599146 + AluJb SINE Alu 133 298 -14 603 348 17 9 chr2 163657918 163658148 -89598435 - MIR SINE MIR -1 261 30 764 296 86 26 chr2 163658269 163658617 -89597966 - MLT1I LTR MaLR -22 387 19 255 291 12 12 chr2 163658789 163658875 -89597708 + MIR SINE MIR 177 262 0 1578 201 3 26 chr2 163659282 163659595 -89596988 - AluJo SINE Alu -6 306 1 670 265 119 15 chr2 163659757 163660025 -89596558 + LTR33A LTR ERVL 226 521 -2 271 360 212 18 chr2 163660025 163660520 -89596063 + L3 LINE CR1 966 1556 -21 1062 0 0 0 chr2 163661422 163661540 -89595043 - AluYa5/8 SINE Alu 0 311 194 306 290 131 0 chr2 163661540 163661647 -89594936 - MLT1H LTR MaLR -37 512 392 294 305 123 7 chr2 163661674 163661828 -89594755 - MLT1H LTR MaLR -251 298 127 649 271 106 26 chr2 163664171 163664473 -89592110 - MER102b DNA MER1_type -9 332 7 308 318 177 5 chr2 163664641 163664839 -89591744 + MIR SINE MIR 28 259 -3 545 277 74 43 chr2 163664917 163665148 -89591435 - MIR SINE MIR -13 249 12 3590 54 6 35 chr2 163666065 163666544 -89590039 + THE1B-int LTR MaLR 1116 1580 0 1976 126 27 48 chr2 163666544 163666916 -89589667 + THE1B LTR MaLR 1 364 0 375 323 50 31 chr2 163667445 163667606 -89588977 - MER5B DNA MER1_type -3 175 12 198 246 18 35 chr2 163667865 163667922 -89588661 - L3 LINE CR1 -880 697 642 1176 205 9 0 chr2 163667925 163668140 -89588443 + AluJo SINE Alu 1 217 -95 289 295 29 72 chr2 163668152 163668291 -89588292 + MER5A DNA MER1_type 55 187 -2 2286 64 3 14 chr2 163668391 163668688 -89587895 + AluSc SINE Alu 1 294 -15 562 100 0 0 chr2 163668783 163668863 -89587720 + MADE1 DNA Mariner 1 80 0 181 286 0 0 chr2 163669319 163669368 -89587215 - MIR SINE MIR -98 110 62 216 0 0 0 chr2 163670007 163670031 -89586552 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 290 289 0 52 chr2 163670770 163670867 -89585716 - L2 LINE L2 0 3313 3222 1722 172 3 7 chr2 163670882 163671173 -89585410 + AluJb SINE Alu 3 292 -20 207 100 0 0 chr2 163672781 163672811 -89583772 + (CA)n Simple_repeat Simple_repeat 1 30 0 637 333 82 0 chr2 163673456 163673687 -89582896 - MIR SINE MIR 0 262 13 1397 81 38 81 chr2 163673730 163673965 -89582618 - AluSx SINE Alu -7 305 81 471 120 0 0 chr2 163674081 163674156 -89582427 - AluSx SINE Alu -237 75 1 646 369 16 35 chr2 163675865 163676177 -89580406 + L2 LINE L2 2967 3272 0 766 309 69 24 chr2 163676201 163676576 -89580007 - L2 LINE L2 -1 3312 2921 2332 87 0 10 chr2 163677239 163677539 -89579044 + AluSq SINE Alu 1 297 -16 34 42 0 0 chr2 163677663 163677711 -89578872 + AT_rich Low_complexity Low_complexity 1 48 0 28 0 0 0 chr2 163678623 163678651 -89577932 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr2 163678847 163678877 -89577706 + AT_rich Low_complexity Low_complexity 1 30 0 237 187 19 93 chr2 163679009 163679116 -89577467 + Charlie7 DNA MER1_type 2514 2612 0 22 0 0 0 chr2 163683442 163683464 -89573119 + AT_rich Low_complexity Low_complexity 1 22 0 235 364 73 0 chr2 163683546 163683656 -89572927 + L3 LINE CR1 1459 1576 -1 424 271 8 10 chr2 163684763 163684884 -89571699 - MIR SINE MIR -61 147 42 207 269 51 51 chr2 163684969 163685047 -89571536 - MER5B DNA MER1_type -75 103 26 2181 226 155 20 chr2 163685342 163686007 -89570576 + MER63C DNA MER1_type 124 893 -167 2300 45 0 21 chr2 163686007 163686320 -89570263 + AluY SINE Alu 1 307 0 2181 226 155 20 chr2 163686320 163686364 -89570219 + MER63C DNA MER1_type 893 930 0 290 351 67 15 chr2 163686373 163686507 -89570076 - MIR3 SINE MIR -66 142 2 6052 161 17 39 chr2 163686742 163687950 -89568633 + L1MC1 LINE L1 292 1473 -4953 * 6449 221 52 48 chr2 163687948 163688170 -89568413 + L1MC1 LINE L1 3020 3240 -3186 1500 190 7 35 chr2 163688170 163688459 -89568124 + AluJo SINE Alu 1 281 -31 6449 221 52 48 chr2 163688459 163690268 -89566315 + L1MC1 LINE L1 3240 5060 -1366 6208 156 23 8 chr2 163690269 163690694 -89565889 + L1MC1 LINE L1 5262 5679 -934 975 194 131 91 chr2 163690694 163691045 -89565538 - MLT1A1 LTR MaLR 0 365 1 6208 156 23 8 chr2 163691045 163691951 -89564632 + L1MC1 LINE L1 5679 6607 -6 395 230 34 95 chr2 163691985 163692133 -89564450 - L1MC5 LINE L1 -845 7116 6978 254 313 9 42 chr2 163692304 163692441 -89564142 + MIR SINE MIR 20 154 -63 1033 156 5 80 chr2 163692769 163692993 -89563590 - MER20 DNA MER1_type -1 218 12 431 104 0 0 chr2 163693354 163693421 -89563162 - Alu SINE Alu -7 302 236 201 39 0 0 chr2 163693978 163694004 -89562579 + (TA)n Simple_repeat Simple_repeat 2 27 0 678 262 99 27 chr2 163694112 163694460 -89562123 + LTR33A LTR ERVL 123 521 -2 190 270 16 32 chr2 163694499 163694562 -89562021 + L2 LINE L2 3210 3271 -1 356 184 24 80 chr2 163694766 163694891 -89561692 - L1ME3A LINE L1 -91 6079 5962 31 26 0 0 chr2 163695007 163695045 -89561538 + AT_rich Low_complexity Low_complexity 1 38 0 2450 58 0 3 chr2 163695045 163695354 -89561229 - AluY SINE Alu -3 308 1 1111 269 47 41 chr2 163695357 163695822 -89560761 - L1MC5 LINE L1 -445 7516 7049 2822 225 85 56 chr2 163696337 163697290 -89559293 - L1ME2 LINE L1 -8 6951 6027 315 0 0 0 chr2 163697290 163697325 -89559258 + (TG)n Simple_repeat Simple_repeat 2 36 0 2822 225 85 56 chr2 163697325 163697984 -89558599 - L1ME2 LINE L1 -932 6027 5238 252 111 0 0 chr2 163697984 163698029 -89558554 - LTR66 LTR ERVL -172 438 394 2822 225 85 56 chr2 163698029 163698182 -89558401 - L1ME2 LINE L1 -1721 5238 5091 3315 266 92 36 chr2 163698201 163699263 -89557320 - L1ME2 LINE L1 -2223 4718 3522 1999 118 4 0 chr2 163699263 163699543 -89557040 - AluSg SINE Alu -28 282 2 3315 266 92 36 chr2 163699543 163700197 -89556386 - L1ME2 LINE L1 -3419 3522 2906 32 26 0 0 chr2 163700219 163700258 -89556325 + AT_rich Low_complexity Low_complexity 1 39 0 1695 294 45 33 chr2 163701425 163703144 -89553439 - L1ME2 LINE L1 -4209 2913 960 504 253 20 7 chr2 163703509 163703655 -89552928 - L1ME2 LINE L1 -5990 433 286 904 243 212 21 chr2 163703664 163703952 -89552631 - MLT2B1 LTR ERVL 0 520 178 849 95 16 32 chr2 163703985 163704111 -89552472 - AluSq/x SINE Alu -188 124 1 969 174 12 0 chr2 163704117 163704289 -89552294 - MLT2B1 LTR ERVL -346 174 1 767 263 53 0 chr2 163704290 163704499 -89552084 - L1ME2 LINE L1 -6143 280 61 26 0 0 0 chr2 163704725 163704751 -89551832 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr2 163706499 163706521 -89550062 + AT_rich Low_complexity Low_complexity 1 22 0 30 83 0 0 chr2 163707144 163707216 -89549367 + AT_rich Low_complexity Low_complexity 1 72 0 1716 167 17 0 chr2 163707736 163708030 -89548553 + AluSx SINE Alu 3 301 -11 926 188 25 14 chr2 163708502 163708700 -89547883 - MSTD LTR MaLR 0 396 225 1766 174 0 10 chr2 163709317 163709627 -89546956 - AluJb SINE Alu -3 309 3 261 0 0 0 chr2 163710606 163710635 -89545948 + (CA)n Simple_repeat Simple_repeat 2 30 0 2208 98 3 10 chr2 163712821 163713128 -89543455 + AluSq SINE Alu 1 305 -8 5017 35 0 2 chr2 163714286 163714882 -89541701 + L1PA5 LINE L1 5545 6139 -15 372 22 0 0 chr2 163714882 163714927 -89541656 + (TA)n Simple_repeat Simple_repeat 1 45 0 3653 173 14 0 chr2 163714927 163715587 -89540996 + L1P LINE L1 3777 4445 -1701 1636 273 69 18 chr2 163715712 163716495 -89540088 - L1MEd LINE L1 -1822 4307 3485 23 33 0 0 chr2 163716609 163716639 -89539944 + AT_rich Low_complexity Low_complexity 1 30 0 396 291 42 13 chr2 163716647 163716884 -89539699 - L1MEd LINE L1 -2694 3435 3192 7099 153 29 31 chr2 163716964 163719330 -89537253 - L1MA4A LINE L1 -6 6297 3925 1713 218 54 10 chr2 163719320 163719573 -89537010 - L1 LINE L1 -2461 5104 4863 * 2111 161 53 0 chr2 163719573 163719953 -89536630 - MER57A LTR ERV1 0 403 4 1713 218 54 10 chr2 163719953 163720259 -89536324 - L1 LINE L1 -2702 4863 4475 548 141 4 2 chr2 163720259 163720364 -89536219 - L1 LINE L1 -3924 3641 3536 * 2671 178 47 18 chr2 163720350 163720907 -89535676 - L1 LINE L1 -6344 1222 358 2086 106 17 0 chr2 163720917 163721209 -89535374 - AluSx SINE Alu -15 297 1 911 273 40 12 chr2 163721227 163721626 -89534957 - L1MEd LINE L1 -2980 3149 2740 861 318 100 69 chr2 163721672 163721844 -89534739 - L1MEd LINE L1 -4092 2218 2053 3375 178 21 3 chr2 163721844 163722503 -89534080 - L1MB3 LINE L1 -1 6182 5512 861 318 100 69 chr2 163722503 163723434 -89533149 - L1MEd LINE L1 -4257 2053 1040 293 331 18 4 chr2 163724271 163724448 -89532135 - MIR SINE MIR 0 262 21 183 337 84 68 chr2 163724833 163725023 -89531560 + L2 LINE L2 3075 3267 -5 1334 95 5 20 chr2 163725369 163725569 -89531014 + L1PA6 LINE L1 5957 6153 -1 2058 214 124 56 chr2 163726659 163727432 -89529151 + LTR1B LTR ERV1 1 826 0 296 377 147 34 chr2 163728702 163729116 -89527467 + L2 LINE L2 2808 3268 -4 1592 128 15 0 chr2 163729540 163729806 -89526777 + L1MA2 LINE L1 6035 6304 0 303 366 72 21 chr2 163729866 163730060 -89526523 - MIR SINE MIR -5 257 54 447 188 24 0 chr2 163730603 163730688 -89525895 - L1MC1 LINE L1 -6 6327 6241 3783 92 2 0 chr2 163730729 163731242 -89525341 - MER75 DNA T2_type 0 514 1 236 356 11 0 chr2 163731392 163731482 -89525101 - MIR SINE MIR 0 262 172 7077 133 20 36 chr2 163732320 163733569 -89523014 - Tigger3b DNA MER2_type -1 1230 2 838 284 26 4 chr2 163733822 163734051 -89522532 - MIR SINE MIR 0 262 29 333 331 31 0 chr2 163734079 163734206 -89522377 - MER20B DNA MER1_type -592 191 61 253 258 0 0 chr2 163734287 163734349 -89522234 + (CA)n Simple_repeat Simple_repeat 1 62 0 250 258 10 21 chr2 163734483 163734580 -89522003 + A-rich Low_complexity Low_complexity 2 97 0 861 319 58 28 chr2 163734704 163735065 -89521518 - L3 LINE CR1 -3 1574 1203 209 333 0 19 chr2 163735230 163735338 -89521245 + (TA)n Simple_repeat Simple_repeat 1 106 0 1211 208 175 16 chr2 163737045 163737473 -89519110 + LTR54B LTR ERV1 1 496 -2 507 267 6 25 chr2 163738313 163738474 -89518109 - L1MA10 LINE L1 -1 6333 6176 228 290 0 0 chr2 163738737 163738799 -89517784 + (CA)n Simple_repeat Simple_repeat 2 63 0 29 0 0 0 chr2 163739012 163739041 -89517542 + AT_rich Low_complexity Low_complexity 1 29 0 210 71 0 0 chr2 163739133 163739161 -89517422 + (TCC)n Simple_repeat Simple_repeat 1 28 0 360 64 0 0 chr2 163739688 163739735 -89516848 + (TG)n Simple_repeat Simple_repeat 2 48 0 2590 55 3 0 chr2 163740773 163741080 -89515503 + AluY SINE Alu 1 308 -3 1603 191 25 4 chr2 163741233 163741542 -89515041 - AluJb SINE Alu 0 318 4 302 283 85 0 chr2 163742874 163742980 -89513603 + MIR SINE MIR 21 135 -73 240 35 0 0 chr2 163745884 163745913 -89510670 + (CAG)n Simple_repeat Simple_repeat 2 30 0 591 247 6 41 chr2 163746632 163746705 -89509878 - MER5C DNA MER1_type -160 164 90 2137 170 20 0 chr2 163746705 163747063 -89509520 + MLT1A1 LTR MaLR 1 365 0 591 247 6 41 chr2 163747063 163747159 -89509424 - MER5C DNA MER1_type -234 90 1 396 0 0 0 chr2 163747286 163747330 -89509253 + (TA)n Simple_repeat Simple_repeat 2 45 0 327 127 0 18 chr2 163747347 163747402 -89509181 - MER5B DNA MER1_type -124 54 1 2928 163 12 68 chr2 163747469 163748047 -89508536 + MLT2B3 LTR ERVL 9 554 0 355 327 125 14 chr2 163748345 163748553 -89508030 - MIR SINE MIR -30 232 2 25 0 0 0 chr2 163748994 163749019 -89507564 + AT_rich Low_complexity Low_complexity 1 25 0 186 339 17 0 chr2 163749580 163749639 -89506944 + MIR SINE MIR 45 104 -104 236 193 23 125 chr2 163750271 163750359 -89506224 + MIR SINE MIR 120 198 -64 183 270 122 0 chr2 163750354 163750428 -89506155 - MIR SINE MIR -2 260 178 * 5685 154 28 24 chr2 163750854 163751370 -89505213 - L1MA9 LINE L1 0 6312 5800 350 89 0 18 chr2 163751370 163751426 -89505157 + (TG)n Simple_repeat Simple_repeat 2 56 0 5685 154 28 24 chr2 163751426 163752242 -89504341 - L1MA9 LINE L1 -512 5800 4981 1755 158 28 51 chr2 163752249 163752678 -89503905 + L1 LINE L1 4360 4778 -1368 1162 202 0 5 chr2 163752680 163752893 -89503690 + AluJb SINE Alu 79 290 -22 943 203 4 5 chr2 163752896 163753107 -89503476 + L1 LINE L1 4769 4978 -1168 28 71 0 0 chr2 163753708 163753764 -89502819 + AT_rich Low_complexity Low_complexity 1 56 0 231 262 119 60 chr2 163754082 163754166 -89502417 - L2 LINE L2 -8 3305 3217 313 281 79 55 chr2 163754198 163754362 -89502221 - MER5A DNA MER1_type -19 170 3 320 145 33 0 chr2 163755036 163755107 -89501476 - L1MC/D LINE L1 -567 5599 5538 342 0 0 0 chr2 163755277 163755315 -89501268 + (TC)n Simple_repeat Simple_repeat 1 38 0 * 450 0 0 0 chr2 163755314 163755364 -89501219 + (CA)n Simple_repeat Simple_repeat 1 50 0 237 108 0 0 chr2 163757048 163757085 -89499498 + (TA)n Simple_repeat Simple_repeat 1 37 0 222 333 97 0 chr2 163757151 163757223 -89499360 + L2 LINE L2 3216 3294 -19 6854 110 24 39 chr2 163757454 163757885 -89498698 + L1MA5A LINE L1 4921 5357 -940 2198 114 7 0 chr2 163757885 163758191 -89498392 + AluSx SINE Alu 3 310 -2 6854 110 24 39 chr2 163758191 163759137 -89497446 + L1MA5A LINE L1 5357 6290 -7 348 24 0 0 chr2 163762014 163762063 -89494520 + (CA)n Simple_repeat Simple_repeat 1 90 0 348 24 0 0 chr2 163762063 163762104 -89494479 + (CA)n Simple_repeat Simple_repeat 1 41 0 238 125 21 42 chr2 163762776 163762824 -89493759 - L3 LINE CR1 -1257 320 274 685 271 48 0 chr2 163763585 163763795 -89492788 - MIR SINE MIR -1 261 42 231 323 10 40 chr2 163765772 163765871 -89490712 - MER102b DNA MER1_type 0 341 246 306 0 0 0 chr2 163765942 163765976 -89490607 + (TG)n Simple_repeat Simple_repeat 2 35 0 30 27 0 0 chr2 163766101 163766138 -89490445 + AT_rich Low_complexity Low_complexity 1 37 0 37 0 0 0 chr2 163766780 163766817 -89489766 + AT_rich Low_complexity Low_complexity 1 37 0 223 339 17 0 chr2 163767472 163767531 -89489052 + MIR SINE MIR 16 75 -187 1519 180 31 48 chr2 163767537 163767892 -89488691 + MLT1A2 LTR MaLR 3 351 -23 200 116 0 70 chr2 163768430 163768473 -89488110 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 2382 67 0 3 chr2 163770450 163770769 -89485814 - AluY SINE Alu 0 311 2 626 309 78 84 chr2 163770921 163772112 -89484471 + L1MC4a LINE L1 3950 5133 -1013 535 272 74 107 chr2 163772225 163772588 -89483995 + L1MC4a LINE L1 5308 5636 -485 2084 133 3 0 chr2 163772588 163772897 -89483686 + AluSx SINE Alu 1 310 -2 535 272 74 107 chr2 163772897 163773264 -89483319 + L1MC4a LINE L1 5636 6014 -107 480 283 158 5 chr2 163774066 163774315 -89482268 + L2 LINE L2 2763 3046 -267 423 0 0 0 chr2 163774578 163774625 -89481958 + (TG)n Simple_repeat Simple_repeat 2 48 0 234 314 14 0 chr2 163774780 163774850 -89481733 + L2 LINE L2 3235 3305 -8 210 71 0 0 chr2 163775022 163775050 -89481533 + (TC)n Simple_repeat Simple_repeat 1 28 0 2106 137 30 9 chr2 163775064 163775401 -89481182 + MER2 DNA MER2_type 1 344 0 336 235 59 0 chr2 163775402 163775487 -89481096 - L1MC4 LINE L1 -1339 6703 6614 516 262 30 30 chr2 163775548 163775712 -89480871 - MIR3 SINE MIR -16 192 29 267 307 102 18 chr2 163775770 163775936 -89480647 - MIR SINE MIR -82 180 1 1082 238 86 31 chr2 163776224 163776607 -89479976 + MLT1C LTR MaLR 3 406 -61 384 192 350 0 chr2 163777498 163777618 -89478965 + MIR SINE MIR 89 250 -12 209 357 56 24 chr2 163777895 163778021 -89478562 + L2 LINE L2 3180 3309 -4 300 271 65 7 chr2 163778259 163778414 -89478169 - MER104 DNA Tc2 -3 177 14 1566 120 49 0 chr2 163778993 163779259 -89477324 - L1MA8 LINE L1 -3 6288 6010 23 33 0 0 chr2 163779516 163779546 -89477037 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr2 163780633 163780655 -89475928 + AT_rich Low_complexity Low_complexity 1 22 0 210 318 34 23 chr2 163781777 163781865 -89474718 - MIR3 SINE MIR -10 198 110 1981 158 7 0 chr2 163782746 163783056 -89473527 + AluJb SINE Alu 1 312 0 271 279 13 0 chr2 163783059 163783138 -89473445 + GA-rich Low_complexity Low_complexity 3 82 0 199 330 11 34 chr2 163783322 163783410 -89473173 - MIR3 SINE MIR 0 208 123 211 313 0 38 chr2 163784145 163784225 -89472358 + L3b LINE CR1 1369 1445 -138 2062 100 30 0 chr2 163784226 163784497 -89472086 + AluSg SINE Alu 1 279 -31 283 82 0 20 chr2 163785526 163785575 -89471008 + L1PB4 LINE L1 6100 6147 -9 1938 144 10 0 chr2 163786633 163786924 -89469659 + AluSx SINE Alu 1 294 -18 934 273 120 3 chr2 163788362 163788695 -89467888 + MLT1G1 LTR MaLR 222 593 -2 388 151 261 34 chr2 163789131 163789250 -89467333 + MIR SINE MIR 110 255 -7 367 259 133 7 chr2 163791997 163792132 -89464451 + MIR SINE MIR 97 248 -14 2210 131 0 0 chr2 163792141 163792446 -89464137 + AluSg SINE Alu 1 305 -5 215 111 0 22 chr2 163792483 163792528 -89464055 + (TAG)n Simple_repeat Simple_repeat 1 44 0 1915 135 0 39 chr2 163792675 163792987 -89463596 + AluJb SINE Alu 7 306 -6 395 267 22 22 chr2 163793634 163793769 -89462814 + L2 LINE L2 3179 3313 0 235 287 45 38 chr2 163795728 163795885 -89460698 - L1ME LINE L1 -295 5826 5669 5462 97 20 15 chr2 163795926 163796774 -89459809 + L1PA14 LINE L1 5308 6159 -2 255 239 14 14 chr2 163796777 163796848 -89459735 - L1ME LINE L1 -497 5624 5554 361 268 146 50 chr2 163797057 163797296 -89459287 - L1ME LINE L1 -900 5246 4985 734 276 20 5 chr2 163797509 163797705 -89458878 + MIR SINE MIR 8 206 -56 594 184 57 0 chr2 163798203 163798344 -89458239 + L1PA13 LINE L1 6011 6159 -4 866 160 7 0 chr2 163798452 163798596 -89457987 - L1MC1 LINE L1 -6 6327 6183 312 295 0 21 chr2 163798597 163798692 -89457891 + MIR SINE MIR 108 200 -62 3867 156 24 24 chr2 163798720 163798873 -89457710 - L1MC1 LINE L1 -173 6160 6008 2356 77 30 0 chr2 163798873 163799171 -89457412 - AluY SINE Alu -4 307 1 3867 156 24 24 chr2 163799171 163799763 -89456820 - L1MC1 LINE L1 -324 6009 5415 13578 169 50 6 chr2 163799778 163802323 -89454260 + L1M1 LINE L1 36 2692 -4873 899 180 14 0 chr2 163802319 163802593 -89453990 - L1MC1 LINE L1 -743 5403 5152 * 386 237 0 10 chr2 163804026 163804123 -89452460 - L1MD3 LINE L1 -355 7640 7545 213 254 210 36 chr2 163804810 163804948 -89451635 + MIR SINE MIR 101 262 0 2219 102 7 7 chr2 163805642 163805945 -89450638 - AluSq SINE Alu -10 303 1 343 271 136 73 chr2 163806629 163806806 -89449777 + MER5A DNA MER1_type 2 189 0 297 197 0 0 chr2 163807196 163807262 -89449321 + CT-rich Low_complexity Low_complexity 1 66 0 268 160 20 0 chr2 163809701 163809751 -89446832 - L2 LINE L2 -1 3312 3262 248 194 119 0 chr2 163810694 163810761 -89445822 - LTR58 LTR ERV1 -232 447 373 213 146 0 0 chr2 163811361 163811409 -89445174 + (CA)n Simple_repeat Simple_repeat 2 49 0 383 253 74 0 chr2 163812384 163812479 -89444104 - MIR SINE MIR -66 196 95 716 180 19 12 chr2 163813453 163813614 -89442969 - MER65C LTR ERV1 0 461 300 644 230 213 10 chr2 163813721 163814017 -89442566 - MER65C LTR ERV1 -105 356 1 288 161 115 92 chr2 163814848 163814935 -89441648 - L2 LINE L2 -41 3272 3184 3652 195 78 15 chr2 163815134 163815896 -89440687 - L1MC4a LINE L1 -218 7590 6877 1573 143 57 32 chr2 163815896 163816175 -89440408 + AluJb SINE Alu 1 286 -26 557 72 12 0 chr2 163816175 163816258 -89440325 + (TAGA)n Simple_repeat Simple_repeat 4 87 0 3652 195 78 15 chr2 163816258 163816421 -89440162 - L1MC4a LINE L1 -930 6878 6606 966 140 140 0 chr2 163816487 163816665 -89439918 - MER2 DNA MER2_type -139 206 4 327 85 0 0 chr2 163816718 163816765 -89439818 + (TC)n Simple_repeat Simple_repeat 1 47 0 228 35 0 0 chr2 163816765 163816794 -89439789 + (TG)n Simple_repeat Simple_repeat 2 30 0 2155 230 51 24 chr2 163816806 163817468 -89439115 - L1MC4a LINE L1 -1203 6605 5926 1304 223 32 46 chr2 163817835 163817947 -89438636 - L1MC4a LINE L1 -1834 5974 5862 2365 62 3 3 chr2 163817947 163818237 -89438346 + AluSc SINE Alu 1 290 -19 1304 223 32 46 chr2 163818237 163818536 -89438047 - L1MC4a LINE L1 -1946 5862 5569 234 356 44 0 chr2 163818537 163818627 -89437956 - MER5B DNA MER1_type -39 139 46 338 211 61 44 chr2 163818636 163818750 -89437833 - L1MB7 LINE L1 -15 6169 6054 351 305 131 77 chr2 163819113 163819711 -89436872 - L2 LINE L2 -204 3068 2448 * 1627 266 105 11 chr2 163819703 163820245 -89436338 + L2 LINE L2 538 1130 -2184 2680 235 83 12 chr2 163820702 163821594 -89434989 - L1ME2 LINE L1 -9 6155 5203 629 190 10 187 chr2 163821605 163821738 -89434845 + L1MC4 LINE L1 7734 7840 -202 263 120 0 0 chr2 163821738 163821788 -89434795 - LTR66 LTR ERVL -167 443 394 629 190 10 187 chr2 163821788 163821915 -89434668 + L1MC4 LINE L1 7840 7988 -54 4863 181 41 7 chr2 163921926 163922934 -89333649 + L1MA7 LINE L1 3502 4543 -1603 297 253 195 0 chr2 163922924 163923011 -89333572 + L1 LINE L1 2587 2690 -3456 * 337 169 217 0 chr2 163924327 163924410 -89332173 + MER90 LTR ERV1 503 603 -11 5232 172 25 15 chr2 163926881 163927925 -89328658 + L1MA7 LINE L1 5227 6280 -11 235 217 65 0 chr2 163928243 163928335 -89328248 + (TA)n Simple_repeat Simple_repeat 1 98 0 284 313 18 9 chr2 163929412 163929524 -89327059 + Tigger1 DNA MER2_type 1040 1152 -1266 762 329 23 26 chr2 163930078 163930425 -89326158 - MARNA DNA Mariner -181 405 60 43 56 0 0 chr2 163932250 163932321 -89324262 + AT_rich Low_complexity Low_complexity 1 71 0 5309 20 3 0 chr2 163933550 163934424 -89322159 + L1P1 LINE L1 4750 5625 -530 189 0 0 0 chr2 163934756 163934777 -89321806 + (T)n Simple_repeat Simple_repeat 1 21 0 225 383 21 0 chr2 163934890 163934984 -89321599 + MIR SINE MIR 4 99 -163 496 170 0 0 chr2 163934984 163935078 -89321505 + MLT2B1 LTR ERVL 1 94 -426 3771 194 101 21 chr2 163935083 163935904 -89320679 + ERVL LTR ERVL 388 1274 -4490 7003 149 16 22 chr2 163938571 163939612 -89316971 + Tigger1 DNA MER2_type 501 1535 -883 2192 99 20 0 chr2 163939612 163939906 -89316677 + AluSq SINE Alu 1 300 -13 7003 149 16 22 chr2 163939906 163940097 -89316486 + Tigger1 DNA MER2_type 1535 1726 -692 371 311 0 0 chr2 163940097 163940248 -89316335 + G-rich Low_complexity Low_complexity 1 151 0 399 199 0 43 chr2 163940260 163940446 -89316137 + G-rich Low_complexity Low_complexity 3 180 0 267 293 12 0 chr2 163940459 163940541 -89316042 + G-rich Low_complexity Low_complexity 2 84 0 198 235 39 0 chr2 163942107 163942158 -89314425 - L2 LINE L2 0 3313 3261 257 204 255 20 chr2 163942336 163942434 -89314149 + MIR SINE MIR 113 233 -29 719 291 35 31 chr2 163942468 163942724 -89313859 + MIR SINE MIR 6 262 0 2200 33 7 4 chr2 163942900 163943171 -89313412 - L1PA4 LINE L1 -3 6152 5881 23 33 0 0 chr2 163943601 163943631 -89312952 + AT_rich Low_complexity Low_complexity 1 30 0 325 287 17 9 chr2 163943999 163944114 -89312469 + L1ME4a LINE L1 5525 5640 -481 297 268 118 0 chr2 163944311 163944438 -89312145 + L1ME4a LINE L1 5955 6096 -25 24 32 0 0 chr2 163945402 163945433 -89311150 + AT_rich Low_complexity Low_complexity 1 31 0 236 263 143 53 chr2 163945442 163945651 -89310932 - HAL1 LINE L1 -10 2497 2270 1562 243 114 2 chr2 163945810 163946276 -89310307 - L1ME1 LINE L1 -144 6302 5785 2864 219 45 24 chr2 163946278 163947080 -89309503 - L1ME1 LINE L1 -816 5610 4792 725 192 15 0 chr2 163947083 163947213 -89309370 + MER2 DNA MER2_type 5 136 -209 1698 151 46 14 chr2 163947232 163947577 -89309006 - L1MA4A LINE L1 -8 6295 5940 329 301 77 61 chr2 163948152 163948348 -89308235 - MIR SINE MIR -44 218 20 2074 128 10 0 chr2 163948704 163949010 -89307573 - AluSx SINE Alu -3 309 1 247 204 0 0 chr2 163950019 163950063 -89306520 - MIR3 SINE MIR -11 197 154 3801 134 31 9 chr2 163950166 163950733 -89305850 - L1MA4A LINE L1 -425 6940 6387 198 0 0 0 chr2 163950733 163950755 -89305828 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 3801 134 31 9 chr2 163950755 163951329 -89305254 - L1MA4A LINE L1 -978 6387 5785 11670 201 31 39 chr2 163951760 163957720 -89298863 - L1MA4A LINE L1 -1381 5827 1 623 199 144 30 chr2 163957734 163957935 -89298648 + MER2 DNA MER2_type 122 345 0 2037 257 36 16 chr2 163957991 163958677 -89297906 - L1ME1 LINE L1 -2211 4215 3516 2547 228 41 41 chr2 163958725 163959552 -89297031 - L1ME1 LINE L1 -3316 3110 2310 821 144 0 43 chr2 163959592 163959731 -89296852 + FLAM_C SINE Alu 1 133 -10 1714 167 0 4 chr2 163959796 163960060 -89296523 - AluJo SINE Alu -26 286 24 229 254 127 0 chr2 163960062 163960172 -89296411 - L1ME1 LINE L1 -4586 1840 1717 29 0 0 0 chr2 163960194 163960223 -89296360 + AT_rich Low_complexity Low_complexity 1 29 0 1475 237 55 88 chr2 163960244 163961024 -89295559 - L1ME1 LINE L1 -4865 1561 808 1257 252 142 17 chr2 163961188 163961845 -89294738 + L1MEc LINE L1 2037 2741 -3474 455 253 79 50 chr2 163961839 163962041 -89294542 + L1ME2 LINE L1 5937 6144 -20 * 814 275 52 9 chr2 163962318 163962664 -89293919 + L1MEc LINE L1 1627 1987 -4409 647 241 112 47 chr2 163962665 163963086 -89293497 + L1MEc LINE L1 1991 2467 -3890 411 256 33 0 chr2 163963076 163963197 -89293386 + L1MEc LINE L1 2356 2480 -3735 * 1713 278 20 19 chr2 163963188 163963885 -89292698 + L1MEc LINE L1 2433 3130 -3085 742 226 149 15 chr2 163963888 163964083 -89292500 + MER58A DNA MER1_type 4 224 0 452 294 72 8 chr2 163964097 163964362 -89292221 + L1MEc LINE L1 3139 3420 -2795 21 57 0 0 chr2 163964990 163965025 -89291558 + AT_rich Low_complexity Low_complexity 1 35 0 1156 112 17 0 chr2 163965025 163965203 -89291380 - L1MA5 LINE L1 -5 6295 6115 25 31 0 0 chr2 163965489 163965521 -89291062 + AT_rich Low_complexity Low_complexity 1 32 0 7102 115 24 8 chr2 163966639 163968304 -89288279 + L1MA1 LINE L1 4605 6298 -4 21 0 0 0 chr2 163968310 163968331 -89288252 + AT_rich Low_complexity Low_complexity 1 21 0 676 213 52 6 chr2 163969245 163969419 -89287164 - MER53 DNA DNA 0 189 8 914 238 35 64 chr2 163969454 163969736 -89286847 + L2 LINE L2 2218 2491 -823 1813 167 10 13 chr2 163970374 163970679 -89285904 - AluJo SINE Alu -8 304 1 314 294 157 77 chr2 163972970 163973440 -89283143 - L1M2 LINE L1 -5768 1081 574 411 21 0 0 chr2 163973994 163974042 -89282541 + (CA)n Simple_repeat Simple_repeat 2 49 0 234 0 0 0 chr2 163975005 163975031 -89281552 + (A)n Simple_repeat Simple_repeat 1 26 0 2553 53 0 0 chr2 163975031 163975332 -89281251 + AluY SINE Alu 1 301 -10 1409 186 25 6 chr2 163975411 163975728 -89280855 + MER33 DNA MER1_type 2 324 0 2828 7 0 0 chr2 163977268 163977574 -89279009 - AluYa5 SINE Alu -5 306 1 4429 140 3 7 chr2 163977681 163978404 -89278179 - L1PB4 LINE L1 -2 6154 5435 1169 173 102 7 chr2 163978776 163979071 -89277512 + MER33 DNA MER1_type 1 323 -1 1978 111 53 58 chr2 163979139 163979269 -89277314 - THE1C LTR MaLR 0 375 246 2098 125 0 3 chr2 163979269 163979565 -89277018 + AluSg SINE Alu 1 295 -15 1978 111 53 58 chr2 163979565 163979811 -89276772 - THE1C LTR MaLR -129 246 1 596 170 15 7 chr2 163980166 163980301 -89276282 - Charlie1 DNA MER1_type -4 2757 2622 * 1034 227 17 13 chr2 163980287 163980525 -89276058 - Charlie1 DNA MER1_type -2522 239 1 682 314 102 22 chr2 163980531 163980932 -89275651 + L2 LINE L2 2154 2586 -728 847 168 21 0 chr2 163980938 163981081 -89275502 - AluJb SINE Alu -35 277 132 426 307 43 0 chr2 163981218 163981358 -89275225 + MIR SINE MIR 100 245 -17 405 175 19 0 chr2 163981437 163981540 -89275043 + L1MA4A LINE L1 6198 6302 -1 1521 113 0 0 chr2 163982280 163982484 -89274099 + AluSx SINE Alu 1 204 -108 340 141 12 12 chr2 163983032 163983117 -89273466 + (TGAA)n Simple_repeat Simple_repeat 4 88 0 236 295 55 44 chr2 163983369 163983552 -89273031 + MLT1J LTR MaLR 327 511 0 317 259 65 0 chr2 163983948 163984056 -89272527 + MER103 DNA DNA 49 163 -3 2310 90 0 0 chr2 163984089 163984378 -89272205 - AluSg SINE Alu -21 289 1 809 146 2 13 chr2 163984681 163984837 -89271746 + L1ME3 LINE L1 6021 6170 0 547 271 195 29 chr2 163985066 163985276 -89271307 - MIR SINE MIR -13 249 5 195 366 43 0 chr2 163985366 163985459 -89271124 + L2 LINE L2 2569 2665 -649 212 307 49 55 chr2 163985476 163985639 -89270944 + L2 LINE L2 3147 3308 -5 387 39 0 0 chr2 163985782 163985834 -89270749 - MADE1 DNA Mariner 0 80 29 277 221 47 47 chr2 163985983 163986069 -89270514 + L2 LINE L2 3186 3271 -1 2474 53 3 3 chr2 163987204 163987505 -89269078 + AluY SINE Alu 1 301 -10 695 272 60 13 chr2 163987967 163988199 -89268384 + MLT1K LTR MaLR 344 586 -2 4844 34 0 0 chr2 163988516 163989084 -89267499 - L1PA5 LINE L1 -2 6152 5585 4431 131 13 13 chr2 163989197 163989900 -89266683 - MER44D DNA MER2_type -2 703 1 21 0 0 0 chr2 163990531 163990552 -89266031 + AT_rich Low_complexity Low_complexity 1 21 0 2373 96 0 6 chr2 163990688 163991002 -89265581 + AluSx SINE Alu 1 312 0 1664 263 101 40 chr2 163991278 163992448 -89264135 + HAL1 LINE L1 114 1388 -1119 534 194 123 29 chr2 163992967 163993137 -89263446 + HAL1 LINE L1 1397 1582 -925 984 260 43 85 chr2 163993172 163993450 -89263133 + HAL1 LINE L1 1521 1809 -698 1969 152 14 0 chr2 163993450 163993739 -89262844 + AluSx SINE Alu 1 293 -19 984 260 43 85 chr2 163993739 163994249 -89262334 + HAL1 LINE L1 1809 2276 -231 1053 177 0 11 chr2 163994273 163994448 -89262135 + AluJb SINE Alu 2 174 -138 3028 261 84 38 chr2 163994611 163994903 -89261680 + L1ME2 LINE L1 44 321 -5894 2819 39 0 0 chr2 163994903 163995268 -89261315 + L1PA5 LINE L1 5800 6164 0 3028 261 84 38 chr2 163995268 163996362 -89260221 + L1ME2 LINE L1 321 1364 -4851 2128 120 35 37 chr2 163996362 163996738 -89259845 + THE1C LTR MaLR 1 375 0 3028 261 84 38 chr2 163996738 163998265 -89258318 + L1ME2 LINE L1 1364 3072 -3143 620 211 98 31 chr2 163998265 163998459 -89258124 - MER3 DNA MER1_type -1 208 2 3028 261 84 38 chr2 163998459 163998600 -89257983 + L1ME2 LINE L1 3072 3205 -3010 598 202 0 0 chr2 163998612 163998721 -89257862 + AluSg/x SINE Alu 188 296 -13 3055 218 51 43 chr2 163998754 164000437 -89256146 + L1ME2 LINE L1 4537 6224 -9 180 330 170 0 chr2 164000658 164000752 -89255831 - MIR SINE MIR -84 178 69 597 302 59 20 chr2 164000800 164001141 -89255442 - LTR16A LTR ERVL -5 445 92 1490 202 53 37 chr2 164001288 164001718 -89254865 + LTR47B LTR ERVL 7 443 0 705 261 27 36 chr2 164001901 164002123 -89254460 - MIR SINE MIR -30 232 13 198 0 0 0 chr2 164002236 164002258 -89254325 + (A)n Simple_repeat Simple_repeat 1 22 0 562 283 66 20 chr2 164002731 164002883 -89253700 + MIR3 SINE MIR 23 181 -27 405 289 0 10 chr2 164003490 164003594 -89252989 - MIR SINE MIR -61 147 45 219 114 0 0 chr2 164003796 164003831 -89252752 + (TTCA)n Simple_repeat Simple_repeat 2 36 0 1853 276 48 20 chr2 164003838 164004724 -89251859 - L2 LINE L2 0 3313 2396 273 260 26 143 chr2 164004724 164004878 -89251705 - L2 LINE L2 -564 2750 2615 206 132 38 19 chr2 164004972 164005025 -89251558 + (TA)n Simple_repeat Simple_repeat 1 54 0 186 118 0 0 chr2 164005025 164005059 -89251524 + (TCTA)n Simple_repeat Simple_repeat 1 34 0 896 128 0 0 chr2 164005200 164005325 -89251258 + AluSp/q SINE Alu 177 301 -12 13470 131 11 20 chr2 164005327 164005821 -89250762 - Tigger1 DNA MER2_type -169 2249 1752 2206 118 0 0 chr2 164005821 164006117 -89250466 + AluSx SINE Alu 1 296 -16 13470 131 11 20 chr2 164006117 164006352 -89250231 - Tigger1 DNA MER2_type -666 1752 1516 2248 94 17 3 chr2 164006352 164006649 -89249934 - AluSq SINE Alu -12 301 1 13470 131 11 20 chr2 164006649 164008188 -89248395 - Tigger1 DNA MER2_type -902 1516 1 2424 150 25 5 chr2 164008188 164008942 -89247641 - L1M2 LINE L1 -645 5646 4876 27 0 0 0 chr2 164008952 164008979 -89247604 + AT_rich Low_complexity Low_complexity 1 27 0 267 31 0 0 chr2 164009724 164009756 -89246827 + (CTA)n Simple_repeat Simple_repeat 3 34 0 280 211 79 0 chr2 164009819 164009895 -89246688 - MIR SINE MIR -50 212 131 802 225 4 81 chr2 164010329 164010565 -89246018 - MER58A DNA MER1_type -2 222 5 327 274 5 93 chr2 164010567 164010777 -89245806 + MIR SINE MIR 57 247 -15 222 118 0 0 chr2 164010923 164010957 -89245626 + (CA)n Simple_repeat Simple_repeat 1 34 0 384 121 71 193 chr2 164011464 164011564 -89245019 + MER63 DNA MER1_type 2 113 -723 1156 123 91 50 chr2 164011564 164011686 -89244897 + MER30 DNA MER1_type 3 140 -90 2204 91 0 14 chr2 164011686 164011992 -89244591 + AluSc SINE Alu 1 302 0 1156 123 91 50 chr2 164011992 164012087 -89244496 + MER30 DNA MER1_type 140 230 0 384 121 71 193 chr2 164012087 164012126 -89244457 + MER63 DNA MER1_type 113 750 -86 330 26 0 0 chr2 164012421 164012460 -89244123 + (CA)n Simple_repeat Simple_repeat 1 39 0 356 302 10 0 chr2 164012579 164012675 -89243908 + MER5A DNA MER1_type 10 106 -83 223 343 60 66 chr2 164012973 164013050 -89243533 + L2 LINE L2 3060 3136 -136 1828 189 106 38 chr2 164013050 164013521 -89243062 + MLT1D LTR MaLR 1 503 -2 223 343 60 66 chr2 164013521 164013609 -89242974 + L2 LINE L2 3136 3224 -48 259 286 65 0 chr2 164013700 164013777 -89242806 + L2 LINE L2 2730 2811 -503 443 252 92 0 chr2 164014018 164014137 -89242446 + L2 LINE L2 3179 3308 -5 607 249 35 12 chr2 164014467 164014636 -89241947 - MER63A DNA MER1_type -36 174 2 23 33 0 0 chr2 164015654 164015684 -89240899 + AT_rich Low_complexity Low_complexity 1 30 0 10157 209 35 26 chr2 164015730 164021510 -89235073 + L1MA4A LINE L1 21 5859 -1349 29811 104 12 56 chr2 164021523 164027958 -89228625 + L1PA7 LINE L1 9 6152 -2 3256 178 19 6 chr2 164027953 164029055 -89227528 + L1MA4A LINE L1 5845 6956 -409 * 514 242 69 35 chr2 164029055 164029373 -89227210 - L1MEc LINE L1 -2726 3489 3161 729 125 29 0 chr2 164029373 164029477 -89227106 - AluSq/x SINE Alu -205 107 1 2969 250 91 63 chr2 164029481 164029560 -89227023 - L1MEc LINE L1 -3214 3001 2926 2069 180 57 7 chr2 164029560 164029966 -89226617 - MSTB LTR MaLR 0 426 1 2969 250 91 63 chr2 164029966 164031363 -89225220 - L1MEc LINE L1 -3289 2926 1569 2066 117 6 49 chr2 164031363 164031689 -89224894 - AluSp SINE Alu -1 312 1 2969 250 91 63 chr2 164031689 164033179 -89223404 - L1MEc LINE L1 -4646 1569 4 1361 191 81 106 chr2 164033221 164033591 -89222992 - MLT1D LTR MaLR 0 505 127 2250 85 3 0 chr2 164033591 164033874 -89222709 + AluSp SINE Alu 1 284 -29 211 0 57 29 chr2 164033879 164033914 -89222669 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 1361 191 81 106 chr2 164033914 164034055 -89222528 - MLT1D LTR MaLR -382 123 1 2428 100 0 0 chr2 164035572 164035882 -89220701 + AluSg SINE Alu 1 310 0 767 257 6 0 chr2 164035930 164036113 -89220470 + Charlie8 DNA MER1_type 103 286 -2131 456 199 81 81 chr2 164036536 164036697 -89219886 + MIR SINE MIR 100 260 -2 2577 39 3 3 chr2 164037382 164037688 -89218895 - AluY SINE Alu -5 306 1 714 240 5 60 chr2 164038460 164038660 -89217923 - MER5A DNA MER1_type 0 189 1 2335 96 3 16 chr2 164038821 164039134 -89217449 + AluSq SINE Alu 4 312 -1 1928 259 115 58 chr2 164039138 164040435 -89216148 + L1MEc LINE L1 450 1820 -4576 425 332 118 14 chr2 164041221 164041441 -89215142 + MIR SINE MIR 18 260 -2 2062 135 0 0 chr2 164041670 164041976 -89214607 + AluSx SINE Alu 1 306 0 2454 158 15 17 chr2 164041985 164042452 -89214131 + L1MB2 LINE L1 5705 6170 -1 1476 164 61 0 chr2 164042455 164042784 -89213799 + L1MB4 LINE L1 5832 6180 0 288 351 88 29 chr2 164044425 164044596 -89211987 - MIR3 SINE MIR -8 200 20 239 254 123 62 chr2 164044642 164044772 -89211811 + MER5B DNA MER1_type 30 167 -11 204 0 26 53 chr2 164044911 164044949 -89211634 + (TA)n Simple_repeat Simple_repeat 2 38 0 659 281 127 34 chr2 164044951 164045336 -89211247 + Charlie7 DNA MER1_type 114 534 -2078 544 217 55 77 chr2 164045475 164045710 -89210873 + HAL1 LINE L1 796 1025 -1482 1720 188 7 7 chr2 164045735 164046044 -89210539 + AluJb SINE Alu 1 309 -3 1027 218 13 39 chr2 164046193 164046427 -89210156 - MIR SINE MIR -33 229 2 418 191 0 29 chr2 164046428 164046533 -89210050 + HAL1 LINE L1 1154 1255 -1252 526 234 169 43 chr2 164046545 164046870 -89209713 + HAL1 LINE L1 1427 1792 -715 394 221 111 22 chr2 164046880 164047061 -89209522 + HAL1 LINE L1 1980 2176 -331 466 246 8 42 chr2 164047069 164047187 -89209396 + L2 LINE L2 3200 3313 0 7110 48 10 3 chr2 164047389 164049134 -89207449 + L1PA7 LINE L1 4400 6154 0 231 274 24 48 chr2 164049136 164049220 -89207363 + HAL1 LINE L1 2377 2458 -49 629 329 77 8 chr2 164049634 164049868 -89206715 + MIR SINE MIR 5 254 -8 1068 169 140 0 chr2 164050273 164050480 -89206103 - MER8 DNA MER2_type 0 239 4 992 173 19 0 chr2 164051185 164051347 -89205236 + AluJb SINE Alu 135 299 -13 2281 105 32 32 chr2 164051380 164051750 -89204833 + THE1C LTR MaLR 6 375 0 870 244 162 0 chr2 164051758 164052086 -89204497 - LTR50 LTR ERVL -192 603 223 440 254 35 29 chr2 164052258 164052431 -89204152 + L1MB3 LINE L1 5466 5639 -531 693 222 91 21 chr2 164052446 164052689 -89203894 + L1ME3A LINE L1 5909 6168 -2 2340 152 101 12 chr2 164052695 164053189 -89203394 + L1MB3 LINE L1 5626 6163 -20 21 0 0 0 chr2 164057217 164057238 -89199345 + AT_rich Low_complexity Low_complexity 1 21 0 2054 135 3 3 chr2 164057241 164057538 -89199045 + AluSx SINE Alu 1 297 -15 2195 107 3 0 chr2 164058692 164058991 -89197592 + AluSc SINE Alu 10 309 0 278 349 0 46 chr2 164060700 164060852 -89195731 + L2 LINE L2 3159 3303 -10 1098 238 35 50 chr2 164060860 164061200 -89195383 - MER46C DNA MER2_type -3 335 1 270 335 71 24 chr2 164061236 164061406 -89195177 - MIR3 SINE MIR -24 184 7 681 197 58 24 chr2 164061778 164061986 -89194597 - MER113 DNA MER1_type? -306 215 1 21 0 0 0 chr2 164062419 164062440 -89194143 + AT_rich Low_complexity Low_complexity 1 21 0 381 204 142 26 chr2 164063579 164063692 -89192891 - MIR SINE MIR -21 241 116 499 245 28 0 chr2 164063976 164064082 -89192501 + MER5A DNA MER1_type 81 189 0 420 221 39 94 chr2 164064550 164064731 -89191852 + L1ME LINE L1 5512 5682 -439 3299 244 54 52 chr2 164067008 164068254 -89188329 + L1M2b LINE L1 1052 2272 -4937 7972 143 152 13 chr2 164068260 164069909 -89186674 + L1PBa LINE L1 1 1878 -4985 7156 179 27 9 chr2 164069905 164070584 -89185999 + L1PBa LINE L1 2416 3081 -3781 * 2298 100 0 0 chr2 164070584 164070875 -89185708 + AluSg SINE Alu 1 291 -19 7156 179 27 9 chr2 164070875 164072384 -89184199 + L1PBa LINE L1 3081 4644 -2218 1466 183 25 6 chr2 164073798 164074115 -89182468 - MER33 DNA MER1_type 0 324 2 2779 7 0 0 chr2 164074194 164074496 -89182087 - AluYa5 SINE Alu -9 302 1 4460 140 3 7 chr2 164074603 164075326 -89181257 - L1PB4 LINE L1 -2 6154 5435 1204 173 102 7 chr2 164075698 164075993 -89180590 + MER33 DNA MER1_type 1 323 -1 2124 109 35 37 chr2 164076061 164076190 -89180393 - THE1C LTR MaLR 0 375 247 2039 132 0 3 chr2 164076190 164076486 -89180097 + AluSg SINE Alu 1 295 -15 2124 109 35 37 chr2 164076486 164076732 -89179851 - THE1C LTR MaLR -128 247 1 636 180 14 7 chr2 164077083 164077222 -89179361 - Charlie1 DNA MER1_type 0 2761 2622 * 1112 227 17 13 chr2 164077208 164077446 -89179137 - Charlie1 DNA MER1_type -2522 239 1 673 314 102 22 chr2 164077452 164077853 -89178730 + L2 LINE L2 2154 2586 -728 728 164 43 0 chr2 164077859 164077999 -89178584 - AluJb SINE Alu -35 277 132 426 307 43 0 chr2 164078136 164078276 -89178307 + MIR SINE MIR 100 245 -17 416 175 19 0 chr2 164078355 164078458 -89178125 + L1MA4A LINE L1 6198 6302 -1 180 263 66 53 chr2 164081527 164081603 -89174980 + MIR SINE MIR 175 251 -11 433 320 117 16 chr2 164081778 164082034 -89174549 - L2 LINE L2 -4 3309 3028 525 16 0 0 chr2 164082077 164082139 -89174444 + (TG)n Simple_repeat Simple_repeat 2 63 0 996 306 131 19 chr2 164082139 164082818 -89173765 - L2 LINE L2 -375 2939 2185 839 290 48 8 chr2 164084242 164084490 -89172093 + MIR SINE MIR 3 260 -2 206 140 88 0 chr2 164085689 164085746 -89170837 + (TTAAA)n Simple_repeat Simple_repeat 4 65 0 390 296 80 30 chr2 164085833 164086047 -89170536 - MIR SINE MIR -28 234 10 198 339 73 28 chr2 164086065 164086174 -89170409 - MER5B DNA MER1_type -23 155 42 4175 24 6 6 chr2 164086921 164087429 -89169154 + L1PA3 LINE L1 5648 6155 0 682 281 171 41 chr2 164087594 164088032 -89168551 + MLT1L LTR MaLR 121 615 0 395 37 0 19 chr2 164088356 164088410 -89168173 + (TC)n Simple_repeat Simple_repeat 1 53 0 395 318 0 19 chr2 164088563 164088717 -89167866 - MER117 DNA MER1_type -44 153 3 210 254 18 0 chr2 164088799 164088854 -89167729 - MER5A DNA MER1_type -81 108 53 676 262 70 42 chr2 164088858 164089253 -89167330 + Charlie8 DNA MER1_type 4 412 -2005 420 276 256 18 chr2 164090092 164090537 -89166046 - L1MC4a LINE L1 -1905 5903 5353 372 343 56 19 chr2 164090540 164090808 -89165775 - L1MC4a LINE L1 -826 5320 5043 638 163 16 47 chr2 164091052 164091181 -89165402 - FLAM_C SINE Alu -6 127 3 201 278 0 0 chr2 164091262 164091316 -89165267 + (TAA)n Simple_repeat Simple_repeat 1 54 0 336 291 200 24 chr2 164091321 164091531 -89165052 - MIR SINE MIR -1 261 15 21 36 0 0 chr2 164092062 164092090 -89164493 + AT_rich Low_complexity Low_complexity 1 28 0 369 282 109 70 chr2 164092091 164092648 -89163935 + L1MC4a LINE L1 5352 5930 -1878 22 0 0 0 chr2 164093293 164093315 -89163268 + AT_rich Low_complexity Low_complexity 1 22 0 309 352 38 19 chr2 164094659 164094818 -89161765 + MIR3 SINE MIR 23 184 -24 335 319 72 0 chr2 164094864 164095002 -89161581 + MIR SINE MIR 75 222 -40 942 225 6 0 chr2 164095018 164095196 -89161387 - MSTD LTR MaLR 0 396 218 2547 14 0 0 chr2 164095198 164095477 -89161106 + AluYb8 SINE Alu 1 279 -39 204 40 0 0 chr2 164095619 164095644 -89160939 + (A)n Simple_repeat Simple_repeat 1 25 0 769 205 19 6 chr2 164095663 164095819 -89160764 - MSTD LTR MaLR -270 158 1 180 200 0 0 chr2 164095819 164095864 -89160719 + (ATG)n Simple_repeat Simple_repeat 2 46 0 2911 90 12 88 chr2 164096213 164096703 -89159880 + MLT2A2 LTR ERVL 1 453 0 186 362 75 0 chr2 164098422 164098516 -89158067 + L2 LINE L2 3139 3239 -33 186 43 0 0 chr2 164098547 164098570 -89158013 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 233 306 97 16 chr2 164098626 164098750 -89157833 + MIR SINE MIR 109 242 -20 492 276 167 6 chr2 164100523 164100679 -89155904 - MER5A DNA MER1_type 0 189 9 1180 216 9 0 chr2 164100729 164100951 -89155632 - MER58A DNA MER1_type 0 224 1 323 287 27 103 chr2 164101448 164101790 -89154793 - L2 LINE L2 0 3272 2927 6317 56 4 18 chr2 164101790 164101923 -89154660 + L1PA8 LINE L1 5358 5491 -681 2188 84 7 26 chr2 164101923 164102231 -89154352 + AluY SINE Alu 1 302 -9 6317 56 4 18 chr2 164102231 164102924 -89153659 + L1PA8 LINE L1 5491 6172 0 323 287 27 103 chr2 164102924 164103058 -89153525 - L2 LINE L2 -345 2927 2784 1019 296 65 53 chr2 164103179 164103797 -89152786 - L2 LINE L2 -556 2758 2134 342 247 37 0 chr2 164104598 164104679 -89151904 - MIR SINE MIR -113 149 66 501 304 56 0 chr2 164105084 164105245 -89151338 - L2 LINE L2 -1 3271 3102 3742 167 18 4 chr2 164106165 164107417 -89149166 + L1PB1 LINE L1 4525 5793 -358 249 113 14 28 chr2 164107430 164107501 -89149082 + (TA)n Simple_repeat Simple_repeat 1 70 0 420 122 14 0 chr2 164107501 164107575 -89149008 + L1PB1 LINE L1 5782 5856 -295 * 4174 172 28 20 chr2 164107574 164108716 -89147867 + L1PA12 LINE L1 1974 3103 -3745 912 206 94 49 chr2 164108722 164108945 -89147638 + MER8 DNA MER2_type 7 239 0 7544 189 78 8 chr2 164108945 164110655 -89145928 + L1 LINE L1 3102 4932 -1916 2005 155 22 27 chr2 164110657 164111058 -89145525 + L1MA4A LINE L1 5894 6292 -11 1602 152 100 7 chr2 164112635 164112945 -89143638 + MER44D DNA MER2_type 1 609 0 301 146 0 0 chr2 164113035 164113083 -89143500 - MLT1F1 LTR MaLR -518 49 2 994 225 163 56 chr2 164113096 164113536 -89143047 + MLT1F LTR MaLR 53 542 0 397 268 34 50 chr2 164113668 164113847 -89142736 + L1MC4 LINE L1 7795 7970 -72 1495 184 56 11 chr2 164113910 164114177 -89142406 + AluJo SINE Alu 6 284 -28 2039 82 0 82 chr2 164114661 164114977 -89141606 - AluSx SINE Alu -22 290 1 217 308 77 22 chr2 164115129 164115220 -89141363 - MIR SINE MIR -142 120 25 443 211 140 70 chr2 164115868 164116039 -89140544 + L1ME2 LINE L1 5972 6154 -10 248 238 59 20 chr2 164116196 164116297 -89140286 + L1MC4 LINE L1 7923 8027 -15 307 302 12 55 chr2 164117028 164117176 -89139407 + MIR3 SINE MIR 20 163 -45 180 240 17 166 chr2 164117361 164117491 -89139092 - L2 LINE L2 -183 3089 2990 2283 99 0 6 chr2 164117491 164117803 -89138780 - AluSq SINE Alu -3 310 1 180 240 17 166 chr2 164117803 164117847 -89138736 - L2 LINE L2 -282 2990 2941 296 271 116 23 chr2 164118123 164118252 -89138331 - MIR SINE MIR -53 209 69 253 371 0 21 chr2 164118414 164118511 -89138072 - MIR SINE MIR -167 95 1 21 0 0 0 chr2 164118950 164118971 -89137612 + AT_rich Low_complexity Low_complexity 1 21 0 369 329 38 13 chr2 164119237 164119395 -89137188 + MIR SINE MIR 101 262 0 2442 87 3 0 chr2 164124822 164125134 -89131449 - AluSp SINE Alu 0 313 1 750 170 15 30 chr2 164126357 164126492 -89130091 - FLAM_C SINE Alu 0 133 1 662 263 162 7 chr2 164127326 164127604 -89128979 - MER113 DNA MER1_type? -41 480 160 1061 208 33 57 chr2 164127750 164128082 -89128501 + MER33 DNA MER1_type 1 324 0 250 246 0 0 chr2 164129292 164129349 -89127234 + (TTCA)n Simple_repeat Simple_repeat 2 58 0 1135 235 13 4 chr2 164131599 164131833 -89124750 - MER46A DNA MER2_type 0 236 1 221 333 43 11 chr2 164136256 164136349 -89120234 + L2 LINE L2 2349 2444 -870 206 234 78 13 chr2 164136351 164136428 -89120155 + L2 LINE L2 2739 2820 -494 333 327 66 83 chr2 164136498 164136847 -89119736 + L2 LINE L2 2926 3268 -4 3098 179 26 4 chr2 164138695 164139227 -89117356 + MER44D DNA MER2_type 7 605 0 291 244 44 0 chr2 164141810 164141900 -89114683 - L1ME4a LINE L1 -82 6039 5946 266 200 144 33 chr2 164142052 164142118 -89114465 - L2 LINE L2 0 3272 3192 378 61 0 0 chr2 164142118 164142167 -89114416 + (CA)n Simple_repeat Simple_repeat 2 50 0 266 200 144 33 chr2 164142167 164142190 -89114393 - L2 LINE L2 -80 3192 3173 181 325 0 0 chr2 164142252 164142292 -89114291 - L2 LINE L2 -247 3066 3027 2815 7 0 0 chr2 164142296 164142597 -89113986 + AluYa5 SINE Alu 1 301 -10 2170 110 36 0 chr2 164142718 164143019 -89113564 - AluSx SINE Alu 0 312 1 291 54 0 0 chr2 164143037 164143074 -89113509 + (T)n Simple_repeat Simple_repeat 1 37 0 2103 120 30 0 chr2 164143204 164143505 -89113078 - AluSx SINE Alu -2 310 1 959 172 0 0 chr2 164143508 164143659 -89112924 + AluJb SINE Alu 105 255 -57 777 200 30 0 chr2 164143668 164143803 -89112780 + MLT1A1 LTR MaLR 227 365 0 2076 137 0 7 chr2 164144032 164144331 -89112252 - AluSx SINE Alu -15 297 1 1231 159 10 5 chr2 164146310 164146511 -89110072 + AluJb SINE Alu 1 202 -110 604 190 83 0 chr2 164146710 164146831 -89109752 + MER99 DNA DNA 698 828 0 323 156 16 31 chr2 164147566 164147630 -89108953 + MER116 DNA Mariner 1 63 -17 1913 150 7 0 chr2 164147632 164147918 -89108665 + AluJo SINE Alu 1 288 -24 2033 129 27 10 chr2 164148200 164148495 -89108088 - AluSx SINE Alu -12 300 1 2096 121 3 3 chr2 164150311 164150617 -89105966 + AluSx SINE Alu 4 309 -3 322 286 158 0 chr2 164151253 164151386 -89105197 + MIR SINE MIR 11 164 -98 220 318 95 0 chr2 164151397 164151523 -89105060 - MIR SINE MIR -1 261 124 1974 122 3 38 chr2 164152681 164153001 -89103582 - AluSx SINE Alu -3 309 1 814 168 8 15 chr2 164153002 164153133 -89103450 - AluJo SINE Alu -178 134 5 4227 95 16 0 chr2 164153249 164153794 -89102789 + MER41A LTR ERV1 1 554 0 292 164 16 33 chr2 164154000 164154061 -89102522 - MER113 DNA MER1_type? -1 520 461 513 172 45 76 chr2 164154188 164154345 -89102238 + MER5B DNA MER1_type 24 175 -3 331 219 114 38 chr2 164154445 164154550 -89102033 - MER81 DNA DNA -1 113 1 243 212 82 59 chr2 164154746 164154831 -89101752 + MER103 DNA DNA 70 156 -10 309 271 110 51 chr2 164155083 164155201 -89101382 - MER5A DNA MER1_type -56 133 9 229 231 0 0 chr2 164155482 164155534 -89101049 + L2 LINE L2 3262 3313 0 240 111 89 22 chr2 164155683 164155728 -89100855 - Alu SINE Alu -203 99 52 424 148 0 157 chr2 164155734 164155784 -89100799 - MLT1A1 LTR MaLR -274 91 65 2356 103 0 3 chr2 164155784 164156095 -89100488 - AluSx SINE Alu -2 310 1 424 148 0 157 chr2 164156095 164156152 -89100431 - MLT1A1 LTR MaLR -300 65 1 364 290 77 103 chr2 164156170 164156667 -89099916 + MLT1K LTR MaLR 99 582 -6 242 388 23 47 chr2 164156667 164156881 -89099702 - L2 LINE L2 -232 3040 2832 1627 174 30 127 chr2 164157000 164157266 -89099317 - MLT1B LTR MaLR 0 390 180 2569 53 7 0 chr2 164157266 164157569 -89099014 - AluY SINE Alu -6 305 1 1627 174 30 127 chr2 164157569 164157734 -89098849 - MLT1B LTR MaLR -210 180 1 264 346 55 28 chr2 164157741 164158030 -89098553 + L1ME3A LINE L1 5483 5779 -383 1692 188 0 10 chr2 164158038 164158331 -89098252 - AluJo SINE Alu -21 291 2 313 246 15 90 chr2 164158332 164158466 -89098117 + L1ME3A LINE L1 5765 5888 -282 758 232 88 5 chr2 164158489 164158683 -89097900 - MER63A DNA MER1_type 0 210 1 506 176 52 15 chr2 164158699 164158835 -89097748 - MIR SINE MIR -65 197 57 2121 77 34 24 chr2 164159597 164159894 -89096689 - AluSc SINE Alu -9 300 1 1500 180 21 25 chr2 164159952 164160235 -89096348 - AluJb SINE Alu -19 293 12 21 0 0 0 chr2 164160676 164160697 -89095886 + AT_rich Low_complexity Low_complexity 1 21 0 187 295 29 105 chr2 164160917 164161022 -89095561 - MIR3 SINE MIR -36 172 76 241 296 14 0 chr2 164161132 164161203 -89095380 + L1MC/D LINE L1 5588 5659 -2149 218 81 27 0 chr2 164161206 164161243 -89095340 + (TAGA)n Simple_repeat Simple_repeat 2 39 0 2415 64 3 13 chr2 164161243 164161554 -89095029 + AluSp SINE Alu 2 309 -4 396 0 0 0 chr2 164161554 164161598 -89094985 + (TAGA)n Simple_repeat Simple_repeat 2 45 0 425 172 0 0 chr2 164161622 164161686 -89094897 - Tigger7 DNA MER2_type -22 2565 2502 914 110 0 0 chr2 164162465 164162583 -89094000 + FLAM_C SINE Alu 1 118 -15 34 24 0 0 chr2 164162587 164162628 -89093955 + AT_rich Low_complexity Low_complexity 1 41 0 828 299 153 24 chr2 164163169 164163804 -89092779 + Charlie7 DNA MER1_type 7 723 -1889 234 221 174 27 chr2 164163801 164163950 -89092633 + Charlie7 DNA MER1_type 2442 2612 0 * 230 290 170 0 chr2 164164005 164164105 -89092478 - L2 LINE L2 0 3313 3197 412 299 61 121 chr2 164164571 164165043 -89091540 + L2 LINE L2 2828 3271 -1 21 0 0 0 chr2 164165683 164165704 -89090879 + AT_rich Low_complexity Low_complexity 1 21 0 1074 196 135 24 chr2 164165862 164166239 -89090344 - Charlie1 DNA MER1_type 0 2761 2343 258 304 14 14 chr2 164166237 164166306 -89090277 - Charlie1 DNA MER1_type -2690 71 3 * 212 366 30 15 chr2 164167465 164167599 -89088984 - L3 LINE CR1 -13 1564 1429 180 0 0 0 chr2 164167899 164167919 -89088664 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1931 159 0 13 chr2 164167932 164168246 -89088337 - AluJb SINE Alu -2 310 1 312 70 0 0 chr2 164170026 164170069 -89086514 + (TC)n Simple_repeat Simple_repeat 2 44 0 308 216 102 148 chr2 164170182 164170418 -89086165 + L2 LINE L2 3073 3297 -16 21 0 0 0 chr2 164170993 164171014 -89085569 + AT_rich Low_complexity Low_complexity 1 21 0 1848 169 0 3 chr2 164171910 164172200 -89084383 + AluJo SINE Alu 1 289 -23 261 274 111 34 chr2 164173045 164173162 -89083421 - MER5A DNA MER1_type -26 163 38 31 0 0 0 chr2 164173544 164173575 -89083008 + AT_rich Low_complexity Low_complexity 1 31 0 365 193 99 62 chr2 164173691 164173883 -89082700 - L1MC5 LINE L1 -158 7803 7605 189 0 0 0 chr2 164173904 164173925 -89082658 + (CAA)n Simple_repeat Simple_repeat 1 21 0 24 0 0 0 chr2 164174558 164174582 -89082001 + AT_rich Low_complexity Low_complexity 1 24 0 1564 168 100 24 chr2 164174681 164175020 -89081563 + MLT1A1 LTR MaLR 1 365 0 1016 221 124 51 chr2 164175159 164175594 -89080989 + MLT1C LTR MaLR 1 467 0 1194 167 46 30 chr2 164175965 164176228 -89080355 + MLT1D LTR MaLR 32 298 -207 446 183 0 11 chr2 164176225 164176324 -89080259 + MLT1D LTR MaLR 276 499 -6 * 430 251 0 7 chr2 164176629 164176774 -89079809 + L1ME3 LINE L1 6025 6169 -1 315 221 117 32 chr2 164177103 164177257 -89079326 + MER112 DNA MER1_type 42 208 -52 966 165 31 0 chr2 164177902 164178096 -89078487 + L1MC3 LINE L1 7410 7609 -176 1925 203 128 28 chr2 164178096 164178627 -89077956 + MLT1G LTR MaLR 7 590 0 451 217 78 35 chr2 164178955 164179070 -89077513 + L2 LINE L2 2492 2611 -703 335 228 33 11 chr2 164179172 164179264 -89077319 - MER5C DNA MER1_type -200 124 31 2358 203 72 3 chr2 164179325 164179896 -89076687 + MER99 DNA DNA 77 686 -142 229 200 0 0 chr2 164179893 164179933 -89076650 - MER3 DNA MER1_type -129 80 41 * 495 128 12 12 chr2 164180146 164180232 -89076351 + AluSg/x SINE Alu 217 302 -7 314 325 244 30 chr2 164180291 164180495 -89076088 + L3 LINE CR1 289 448 -1129 2190 130 0 0 chr2 164180495 164180795 -89075788 + AluSx SINE Alu 1 300 -12 314 325 244 30 chr2 164180795 164181618 -89074965 + L3 LINE CR1 448 1536 -41 504 0 0 0 chr2 164181677 164181733 -89074850 + (CA)n Simple_repeat Simple_repeat 2 57 0 2004 146 3 7 chr2 164182038 164182346 -89074237 + AluJb SINE Alu 1 307 -5 1595 207 39 8 chr2 164183003 164183365 -89073218 - MLT1A2 LTR MaLR 0 374 2 484 333 69 74 chr2 164183543 164183991 -89072592 + L2 LINE L2 2826 3271 -1 2358 71 3 3 chr2 164184263 164184559 -89072024 + AluY SINE Alu 1 296 -15 2114 112 0 17 chr2 164184575 164184869 -89071714 + AluSc SINE Alu 1 289 -20 1378 161 11 80 chr2 164184955 164185091 -89071492 + AluJb SINE Alu 1 145 -167 360 0 0 0 chr2 164185091 164185131 -89071452 + (TG)n Simple_repeat Simple_repeat 2 41 0 1378 161 11 80 chr2 164185131 164185145 -89071438 + AluJb SINE Alu 145 158 -154 207 0 0 0 chr2 164185145 164185168 -89071415 + (CA)n Simple_repeat Simple_repeat 2 24 0 1378 161 11 80 chr2 164185168 164185302 -89071281 + AluJb SINE Alu 158 266 -46 184 188 0 0 chr2 164186365 164186397 -89070186 - L2 LINE L2 -12 3301 3270 2131 150 3 0 chr2 164186738 164187045 -89069538 + AluJb SINE Alu 1 308 -4 24 32 0 0 chr2 164187288 164187319 -89069264 + AT_rich Low_complexity Low_complexity 1 31 0 2170 118 0 40 chr2 164187496 164187819 -89068764 + AluSx SINE Alu 1 310 -2 262 200 0 0 chr2 164187938 164187988 -89068595 - MLT1L LTR MaLR -414 201 152 321 345 21 7 chr2 164188698 164188840 -89067743 + L3 LINE CR1 1415 1558 -19 897 212 26 37 chr2 164188877 164188969 -89067614 + MER5A DNA MER1_type 3 94 -95 1994 210 47 13 chr2 164188969 164189421 -89067162 + MLT1C LTR MaLR 1 467 0 897 212 26 37 chr2 164189421 164189517 -89067066 + MER5A DNA MER1_type 94 189 0 234 0 0 0 chr2 164189522 164189548 -89067035 + (TTCC)n Simple_repeat Simple_repeat 3 28 0 5701 98 12 2 chr2 164189551 164190031 -89066552 - L1PA16 LINE L1 0 6166 5693 1644 186 23 3 chr2 164190031 164190332 -89066251 - AluJo SINE Alu -5 307 1 5701 98 12 2 chr2 164190332 164191165 -89065418 - L1PA16 LINE L1 -473 5693 4820 483 131 202 0 chr2 164191205 164191289 -89065294 - U6 snRNA snRNA -6 101 1 377 284 174 19 chr2 164191329 164191484 -89065099 - MER5A DNA MER1_type -7 182 4 686 193 36 7 chr2 164191495 164191635 -89064948 + MER3 DNA MER1_type 1 144 -65 896 109 0 29 chr2 164191639 164191776 -89064807 - FLAM_C SINE Alu 0 133 1 31 26 0 0 chr2 164191782 164191820 -89064763 + AT_rich Low_complexity Low_complexity 1 38 0 189 0 0 0 chr2 164192417 164192438 -89064145 + (A)n Simple_repeat Simple_repeat 1 21 0 190 282 149 101 chr2 164192812 164193220 -89063363 - L2 LINE L2 -20 3252 2825 2391 77 7 0 chr2 164193998 164194297 -89062286 + AluSp SINE Alu 1 301 -12 228 219 0 0 chr2 164194692 164194733 -89061850 + MER5B DNA MER1_type 1 41 -137 2332 109 0 0 chr2 164194802 164195113 -89061470 - AluSx SINE Alu 0 312 2 416 240 10 0 chr2 164195784 164195884 -89060699 + MLT1L LTR MaLR 32 132 -483 229 204 0 0 chr2 164195945 164195989 -89060594 + MIR SINE MIR 82 125 -137 244 302 0 42 chr2 164196015 164196111 -89060472 + MLT1L LTR MaLR 411 502 -113 566 218 0 9 chr2 164196111 164196221 -89060362 + L2 LINE L2 3197 3305 -8 245 226 16 0 chr2 164196758 164196820 -89059763 + MLT1K LTR MaLR 518 580 -8 2333 117 0 0 chr2 164196936 164197245 -89059338 + AluSc SINE Alu 1 309 0 309 26 0 0 chr2 164198195 164198233 -89058350 + (CA)n Simple_repeat Simple_repeat 2 39 0 306 200 10 30 chr2 164198626 164198712 -89057871 + CT-rich Low_complexity Low_complexity 3 88 -12 2106 101 3 7 chr2 164198712 164198998 -89057585 - AluSg SINE Alu -25 285 1 306 200 10 30 chr2 164198998 164199011 -89057572 + CT-rich Low_complexity Low_complexity 88 100 0 623 175 0 0 chr2 164199089 164199186 -89057397 - FRAM SINE Alu -77 99 3 192 77 0 0 chr2 164199262 164199288 -89057295 + (A)n Simple_repeat Simple_repeat 1 26 0 474 33 0 0 chr2 164199307 164199367 -89057216 + (CAAG)n Simple_repeat Simple_repeat 2 61 0 1950 163 17 0 chr2 164199387 164199688 -89056895 + AluJb SINE Alu 1 306 -6 337 306 146 10 chr2 164199835 164200034 -89056549 - MIR SINE MIR -17 245 20 411 175 12 25 chr2 164200314 164200394 -89056189 + MER94 DNA DNA 1 79 -55 390 284 30 23 chr2 164200662 164200814 -89055769 - MER5A DNA MER1_type -1 188 26 408 291 61 56 chr2 164201192 164201388 -89055195 - MIR SINE MIR -30 232 36 187 263 75 25 chr2 164202223 164202303 -89054280 + MIR SINE MIR 64 147 -115 21 36 0 0 chr2 164202404 164202432 -89054151 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr2 164202744 164202769 -89053814 + AT_rich Low_complexity Low_complexity 1 25 0 2438 101 3 0 chr2 164202878 164203186 -89053397 - AluSx SINE Alu -2 310 2 466 261 47 85 chr2 164204718 164204936 -89051647 - L1MC5 LINE L1 -51 7910 7685 1753 156 0 11 chr2 164204936 164205211 -89051372 + AluSx SINE Alu 3 274 -38 350 42 21 0 chr2 164205219 164205267 -89051316 + (TAAA)n Simple_repeat Simple_repeat 3 51 0 466 261 47 85 chr2 164205267 164205461 -89051122 - L1MC5 LINE L1 -283 7678 7505 207 0 0 0 chr2 164206473 164206496 -89050087 + (T)n Simple_repeat Simple_repeat 1 23 0 693 181 17 0 chr2 164208165 164208281 -89048302 - FLAM_A SINE Alu -15 118 1 981 254 27 52 chr2 164208389 164208795 -89047788 + L1MC4a LINE L1 5521 5916 -1892 25 31 0 0 chr2 164209047 164209079 -89047504 + AT_rich Low_complexity Low_complexity 1 32 0 668 207 0 0 chr2 164209079 164209195 -89047388 - FLAM_A SINE Alu -14 119 4 238 245 0 0 chr2 164209225 164209278 -89047305 + MIR SINE MIR 118 170 -92 398 268 0 0 chr2 164210355 164210437 -89046146 - L2 LINE L2 0 3313 3232 271 215 215 22 chr2 164210464 164210599 -89045984 - MIR SINE MIR -21 241 81 517 200 33 72 chr2 164211627 164211807 -89044776 - MER112 DNA MER1_type -85 175 3 305 298 161 6 chr2 164213520 164213688 -89042895 + MIR SINE MIR 68 261 -1 480 18 0 0 chr2 164214307 164214364 -89042219 + (CA)n Simple_repeat Simple_repeat 2 58 0 1874 158 7 0 chr2 164214871 164215169 -89041414 + AluJo SINE Alu 1 300 -12 1710 177 13 7 chr2 164215199 164215499 -89041084 + AluSx SINE Alu 1 302 -10 287 267 13 13 chr2 164215655 164215730 -89040853 - MER20 DNA MER1_type -144 75 1 284 179 155 12 chr2 164215919 164216003 -89040580 - MER33 DNA MER1_type 0 324 229 * 466 218 145 0 chr2 164216001 164216133 -89040450 - MER33 DNA MER1_type -252 72 1 1069 241 32 123 chr2 164216640 164216712 -89039871 + MER20B DNA MER1_type 106 183 -600 1415 182 141 3 chr2 164216712 164217031 -89039552 + MLT1A1 LTR MaLR 3 365 0 1069 241 32 123 chr2 164217031 164217472 -89039111 + MER20B DNA MER1_type 183 662 -121 2200 119 0 0 chr2 164217472 164217757 -89038826 - AluSx SINE Alu -27 285 1 1069 241 32 123 chr2 164217757 164217821 -89038762 + MER20B DNA MER1_type 662 606 -177 2260 112 3 0 chr2 164217821 164218125 -89038458 - AluSx SINE Alu -7 305 1 1069 241 32 123 chr2 164218125 164218284 -89038299 + MER20B DNA MER1_type 605 777 -6 180 0 0 0 chr2 164218962 164218982 -89037601 + (CAA)n Simple_repeat Simple_repeat 1 20 0 530 260 62 31 chr2 164219160 164219387 -89037196 + L1MC4a LINE L1 6495 6728 -1080 376 283 26 20 chr2 164219387 164219539 -89037044 + L1MC5 LINE L1 7375 7527 -434 234 330 0 0 chr2 164220376 164220479 -89036104 + L1MC1 LINE L1 4745 4847 -1299 316 324 68 42 chr2 164220550 164221002 -89035581 + MLT1J2 LTR MaLR 1 511 0 430 263 0 72 chr2 164221156 164221308 -89035275 + L2 LINE L2 3173 3313 0 1124 284 75 26 chr2 164221450 164221977 -89034606 + L1MC1 LINE L1 5287 5852 -1956 2264 84 0 19 chr2 164221977 164222287 -89034296 + AluY SINE Alu 2 305 -6 1124 284 75 26 chr2 164222287 164222401 -89034182 + L1MC1 LINE L1 5852 5959 -1849 1415 167 0 50 chr2 164223515 164223773 -89032810 + AluJo SINE Alu 40 313 0 241 35 0 0 chr2 164223773 164223802 -89032781 + (TAA)n Simple_repeat Simple_repeat 2 180 0 1690 194 0 10 chr2 164224138 164224437 -89032146 - AluJb SINE Alu -16 296 1 2335 154 41 5 chr2 164224493 164224882 -89031701 + L1MC1 LINE L1 5931 6333 0 2222 112 3 10 chr2 164224893 164225205 -89031378 + AluSg SINE Alu 1 310 0 2888 7 0 0 chr2 164225970 164226277 -89030306 + AluYa5 SINE Alu 1 307 -4 1752 94 11 60 chr2 164226422 164226689 -89029894 + AluSq SINE Alu 49 302 -11 359 276 45 85 chr2 164228264 164228463 -89028120 - Charlie8 DNA MER1_type -2226 191 1 456 239 72 7 chr2 164228513 164228651 -89027932 + MIR SINE MIR 79 225 -37 2165 94 7 14 chr2 164228896 164229193 -89027390 + AluSg SINE Alu 2 296 -14 406 272 93 37 chr2 164230098 164230344 -89026239 - MER112 DNA MER1_type 0 260 1 330 250 67 39 chr2 164231692 164231796 -89024787 - L2 LINE L2 -8 3264 3158 561 246 47 52 chr2 164233678 164233889 -89022694 - MER113 DNA MER1_type? -311 210 1 361 282 210 31 chr2 164233894 164234089 -89022494 + MIR SINE MIR 13 242 -20 252 59 0 0 chr2 164236178 164236212 -89020371 + (CA)n Simple_repeat Simple_repeat 2 35 0 1676 150 3 47 chr2 164236675 164236975 -89019608 - AluJo SINE Alu -4 308 22 341 247 0 0 chr2 164236977 164237058 -89019525 - AluJ/FLAM SINE Alu -240 62 1 423 92 0 0 chr2 164237162 164237227 -89019356 + L1PB4 LINE L1 6092 6156 0 867 144 6 61 chr2 164237258 164237438 -89019145 + L1MB8 LINE L1 6007 6176 -2 2037 125 10 10 chr2 164237449 164237744 -89018839 + AluSx SINE Alu 1 295 -17 227 316 31 10 chr2 164237749 164237847 -89018736 - L1ME4a LINE L1 -73 6048 5949 880 231 0 0 chr2 164237909 164238069 -89018514 + FRAM SINE Alu 2 161 -5 364 314 57 19 chr2 164238105 164238264 -89018319 + MIR3 SINE MIR 41 205 -3 257 265 0 91 chr2 164238316 164238448 -89018135 + L1MC4a LINE L1 5819 5938 -1870 321 25 50 0 chr2 164238585 164238625 -89017958 + tRNA-Gln-CAG tRNA tRNA 1 42 -33 1782 145 60 0 chr2 164238648 164238931 -89017652 - AluJb SINE Alu -7 305 6 188 0 74 0 chr2 164238947 164238974 -89017609 + (TTTTC)n Simple_repeat Simple_repeat 1 29 0 * 225 94 0 0 chr2 164238973 164239005 -89017578 + (TCCC)n Simple_repeat Simple_repeat 3 34 0 2135 141 0 3 chr2 164239005 164239317 -89017266 - AluSx SINE Alu -1 311 1 2270 100 10 0 chr2 164239440 164239740 -89016843 - AluSp SINE Alu -10 303 1 220 345 78 21 chr2 164239764 164239906 -89016677 + L2 LINE L2 2783 2932 -382 358 243 72 18 chr2 164239972 164240083 -89016500 - MIR3 SINE MIR -16 192 76 410 224 197 0 chr2 164240791 164240938 -89015645 - L1ME4a LINE L1 -2 6119 5944 430 272 31 25 chr2 164241052 164241214 -89015369 - L1ME4a LINE L1 -426 5695 5533 24 0 0 0 chr2 164241279 164241303 -89015280 + AT_rich Low_complexity Low_complexity 1 24 0 2318 68 0 0 chr2 164241512 164241816 -89014767 + AluY SINE Alu 1 304 0 24 67 0 0 chr2 164242002 164242047 -89014536 + AT_rich Low_complexity Low_complexity 1 45 0 2365 73 0 0 chr2 164243469 164243755 -89012828 - AluSx SINE Alu -15 297 12 24 32 0 0 chr2 164243861 164243892 -89012691 + AT_rich Low_complexity Low_complexity 1 31 0 49 0 0 0 chr2 164243987 164244036 -89012547 + AT_rich Low_complexity Low_complexity 1 49 0 1339 153 28 23 chr2 164244349 164244565 -89012018 + MER20 DNA MER1_type 3 219 0 342 0 0 0 chr2 164244669 164244707 -89011876 + (CA)n Simple_repeat Simple_repeat 2 39 0 3426 134 88 0 chr2 164244816 164245325 -89011258 - MER41C LTR ERV1 0 554 1 343 314 57 8 chr2 164245494 164245618 -89010965 - L2 LINE L2 0 3272 3143 222 254 16 16 chr2 164245757 164245820 -89010763 - MIR SINE MIR -152 110 48 244 191 43 0 chr2 164246198 164246245 -89010338 + Charlie3 DNA MER1_type 2629 2677 -33 319 289 96 19 chr2 164246771 164246875 -89009708 + L2 LINE L2 3201 3312 -1 1674 179 40 7 chr2 164246897 164247217 -89009366 + AluJb SINE Alu 1 525 -87 1093 63 0 53 chr2 164247217 164247407 -89009176 + (GGAAA)n Simple_repeat Simple_repeat 1 180 0 1674 179 40 7 chr2 164247407 164247499 -89009084 + AluJb SINE Alu 525 612 0 1536 167 53 25 chr2 164248558 164248683 -89007900 + AluJb SINE Alu 1 121 -191 2307 88 3 10 chr2 164248683 164248989 -89007594 + AluSx SINE Alu 1 304 -8 1536 167 53 25 chr2 164248989 164249145 -89007438 + AluJb SINE Alu 121 290 -22 22 80 0 0 chr2 164249191 164249241 -89007342 + AT_rich Low_complexity Low_complexity 1 50 0 2191 105 0 3 chr2 164249272 164249585 -89006998 - AluSx SINE Alu 0 312 1 227 285 192 10 chr2 164250054 164250247 -89006336 + L2 LINE L2 2807 3034 -238 2217 98 3 20 chr2 164250450 164250755 -89005828 + AluSq SINE Alu 1 300 -13 22 35 0 0 chr2 164251251 164251280 -89005303 + AT_rich Low_complexity Low_complexity 1 29 0 869 247 0 0 chr2 164251455 164251613 -89004970 - FRAM SINE Alu -18 158 1 875 142 13 13 chr2 164252329 164252484 -89004099 + L1MB7 LINE L1 6030 6184 0 234 296 104 17 chr2 164252606 164252721 -89003862 + MIR SINE MIR 20 144 -118 23 33 0 0 chr2 164252807 164252837 -89003746 + AT_rich Low_complexity Low_complexity 1 30 0 228 219 0 0 chr2 164253878 164253919 -89002664 + MER5B DNA MER1_type 1 41 -137 225 213 0 21 chr2 164253957 164254004 -89002579 + MER5B DNA MER1_type 133 178 0 2081 90 0 4 chr2 164254643 164254910 -89001673 - AluSx SINE Alu -46 266 1 237 200 0 29 chr2 164255149 164255219 -89001364 + (TA)n Simple_repeat Simple_repeat 2 69 0 2059 170 19 35 chr2 164255227 164255598 -89000985 + MLT1A1 LTR MaLR 1 365 0 618 260 121 14 chr2 164255734 164255957 -89000626 + MIR SINE MIR 14 260 -2 194 218 77 51 chr2 164257180 164257258 -88999325 + L2 LINE L2 3168 3247 -25 204 280 273 30 chr2 164257507 164257639 -88998944 + MIR SINE MIR 81 244 -18 31 26 0 0 chr2 164257996 164258034 -88998549 + AT_rich Low_complexity Low_complexity 1 38 0 254 29 29 0 chr2 164258310 164258345 -88998238 + (GGA)n Simple_repeat Simple_repeat 3 38 0 24 0 0 0 chr2 164259587 164259611 -88996972 + AT_rich Low_complexity Low_complexity 1 24 0 506 297 125 47 chr2 164260513 164260856 -88995727 + MLT1K LTR MaLR 196 565 -23 992 210 0 39 chr2 164262076 164262257 -88994326 + FAM SINE Alu 1 174 -1 2220 99 0 13 chr2 164262259 164262563 -88994020 + AluY SINE Alu 1 300 -11 203 246 53 0 chr2 164262710 164262767 -88993816 + L2 LINE L2 3187 3246 -26 408 306 48 0 chr2 164262905 164263029 -88993554 - L2 LINE L2 0 3313 3184 185 253 96 24 chr2 164263819 164263902 -88992681 + MIR SINE MIR 74 162 -100 * 743 269 11 34 chr2 164263887 164264151 -88992432 - MIR SINE MIR 0 262 5 270 300 0 27 chr2 164314790 164314900 -88941683 - LTR67 LTR ERVL -22 535 429 2343 92 0 0 chr2 164315066 164315361 -88941222 - AluSg SINE Alu -15 295 1 1758 132 0 8 chr2 164315381 164315632 -88940951 + AluSx SINE Alu 46 294 -18 529 198 41 25 chr2 164315684 164315805 -88940778 - MLT1B LTR MaLR 0 390 268 529 198 41 25 chr2 164315811 164315932 -88940651 - MLT1B LTR MaLR 0 390 268 1527 200 49 38 chr2 164315938 164316308 -88940275 - MLT1A2 LTR MaLR 0 374 1 2269 114 0 0 chr2 164316503 164316801 -88939782 - AluSx SINE Alu -14 298 1 309 291 10 0 chr2 164317146 164317249 -88939334 + MIR SINE MIR 159 262 0 1479 221 113 36 chr2 164317656 164318123 -88938460 + MLT1D LTR MaLR 1 503 -2 3125 297 46 15 chr2 164318920 164319982 -88936601 + HERV16-F LTR ERVL 474 1568 -3428 3210 308 65 30 chr2 164320048 164320148 -88936435 + HERV16-F LTR ERVL 1736 1831 -3165 2142 107 23 7 chr2 164320148 164320456 -88936127 - AluSp SINE Alu 0 313 1 3210 308 65 30 chr2 164320456 164320844 -88935739 + HERV16-F LTR ERVL 1831 2204 -2792 1462 211 24 63 chr2 164320844 164320920 -88935663 + MLT1A1 LTR MaLR 1 78 -287 1634 143 0 0 chr2 164320920 164321171 -88935412 - AluSx SINE Alu 0 305 55 1462 211 24 63 chr2 164321171 164321472 -88935111 + MLT1A1 LTR MaLR 78 365 0 3210 308 65 30 chr2 164321472 164322266 -88934317 + HERV16-F LTR ERVL 2204 3063 -1933 1349 156 13 5 chr2 164322266 164322490 -88934093 + AluJb SINE Alu 87 312 0 456 332 71 50 chr2 164322503 164323285 -88933298 + HERV16-F LTR ERVL 3059 3534 -1462 1207 346 66 18 chr2 164323370 164324021 -88932562 + HERV16-F LTR ERVL 3996 4677 -977 382 318 29 18 chr2 164324322 164324492 -88932091 + HERV16-F LTR ERVL 4517 4688 -308 23 0 0 0 chr2 164324508 164324531 -88932052 + AT_rich Low_complexity Low_complexity 1 23 0 777 147 0 44 chr2 164324531 164324667 -88931916 - FLAM_C SINE Alu -3 130 1 491 264 69 45 chr2 164324702 164324860 -88931723 - L1M4 LINE L1 -976 5170 5017 310 89 0 0 chr2 164324860 164324905 -88931678 + (TTTA)n Simple_repeat Simple_repeat 2 96 0 2092 81 0 4 chr2 164324905 164325163 -88931420 - AluSg1 SINE Alu -30 279 23 491 264 69 45 chr2 164325163 164325249 -88931334 - L1M4 LINE L1 -1128 5018 4919 1059 304 72 45 chr2 164325343 164325483 -88931100 + MLT2F LTR ERVL 1 136 -527 698 34 11 0 chr2 164325483 164325572 -88931011 + (TCTA)n Simple_repeat Simple_repeat 2 91 0 1059 304 72 45 chr2 164325572 164326056 -88930527 + MLT2F LTR ERVL 136 642 -21 183 100 0 0 chr2 164326577 164326607 -88929976 + (TG)n Simple_repeat Simple_repeat 1 30 0 305 293 54 59 chr2 164326889 164327111 -88929472 + MLT1J LTR MaLR 279 499 -12 782 211 0 0 chr2 164327173 164327306 -88929277 - FLAM_A SINE Alu 0 133 1 768 237 0 13 chr2 164327330 164327486 -88929097 - AluJb SINE Alu -26 286 133 1293 191 67 24 chr2 164328244 164328573 -88928010 - MER2 DNA MER2_type -1 343 1 4848 112 56 92 chr2 164328628 164329645 -88926938 - L1MA8 LINE L1 -4 6287 5321 185 0 0 39 chr2 164329645 164329671 -88926912 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 4848 112 56 92 chr2 164329671 164329874 -88926709 - L1MA8 LINE L1 -970 5321 5112 21 0 0 0 chr2 164329951 164329972 -88926611 + AT_rich Low_complexity Low_complexity 1 21 0 1589 132 116 4 chr2 164329979 164330237 -88926346 + AluSx SINE Alu 1 287 -25 200 272 78 68 chr2 164330298 164330401 -88926182 + MIR SINE MIR 36 139 -69 4151 143 22 3 chr2 164330486 164331178 -88925405 + MER50 LTR ERV1 3 707 -27 1938 157 7 3 chr2 164331423 164331717 -88924866 - AluJb SINE Alu -17 295 1 1493 273 84 26 chr2 164331753 164332165 -88924418 - MER20B DNA MER1_type 0 783 397 1396 139 3 133 chr2 164332165 164332497 -88924086 + AluJo SINE Alu 2 290 -12 1493 273 84 26 chr2 164332497 164332700 -88923883 - MER20B DNA MER1_type -386 397 207 2337 107 3 16 chr2 164332700 164333017 -88923566 + AluSp SINE Alu 1 313 0 1493 273 84 26 chr2 164333017 164333134 -88923449 - MER20B DNA MER1_type -576 207 7 189 263 0 70 chr2 164333146 164333203 -88923380 + L2 LINE L2 3261 3313 0 508 273 38 30 chr2 164333235 164333579 -88923004 - MLT1J LTR MaLR -14 497 116 2429 103 0 0 chr2 164333627 164333937 -88922646 + AluSg SINE Alu 1 310 0 308 308 54 85 chr2 164333940 164334164 -88922419 + L1MEd LINE L1 83 299 -5820 3632 212 26 22 chr2 164334202 164335180 -88921403 + L1MB7 LINE L1 5190 6184 0 1689 175 3 31 chr2 164335347 164335633 -88920950 - AluJo SINE Alu -26 286 9 1006 214 42 45 chr2 164335713 164336026 -88920557 - L1M4 LINE L1 -2060 4086 3775 189 0 0 0 chr2 164336046 164336067 -88920516 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 1126 180 21 5 chr2 164336071 164336260 -88920323 - AluSg/x SINE Alu -36 274 83 2384 105 62 3 chr2 164336341 164336694 -88919889 - THE1C LTR MaLR -1 374 1 9603 121 41 10 chr2 164336699 164338225 -88918358 - THE1C-int LTR MaLR -6 1574 1 2587 96 2 53 chr2 164338225 164338294 -88918289 - THE1C LTR MaLR 0 375 304 225 0 0 0 chr2 164338294 164338319 -88918264 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2083 104 0 7 chr2 164338328 164338606 -88917977 - AluSp SINE Alu -37 276 1 2587 96 2 53 chr2 164338606 164338921 -88917662 - THE1C LTR MaLR -79 296 1 2099 149 0 0 chr2 164339254 164339555 -88917028 + AluSx SINE Alu 1 301 -11 1430 232 26 5 chr2 164341213 164341635 -88914948 - L1M4 LINE L1 -2368 3778 3348 846 240 1 5 chr2 164341641 164341849 -88914734 - MLT1A2 LTR MaLR 0 374 183 6820 168 29 25 chr2 164341906 164342305 -88914278 - L1PB1 LINE L1 -1 6866 6470 1959 147 0 23 chr2 164342305 164342611 -88913972 - AluSx SINE Alu -13 299 1 6820 168 29 25 chr2 164342611 164343807 -88912776 - L1PB1 LINE L1 -397 6470 5280 1851 176 3 0 chr2 164343807 164344102 -88912481 - AluSx SINE Alu -16 296 1 6820 168 29 25 chr2 164344102 164344287 -88912296 - L1PB1 LINE L1 -1587 5280 5097 2178 109 0 7 chr2 164344287 164344594 -88911989 - AluSg SINE Alu 0 305 1 6820 168 29 25 chr2 164344594 164345284 -88911299 - L1PB1 LINE L1 -1770 5097 4408 2876 136 118 108 chr2 164345284 164346603 -88909980 - pTR5 LTR ERV1 0 1600 6 7394 170 27 12 chr2 164346603 164349696 -88906887 - L1PB1 LINE L1 -2444 4418 1093 4131 205 54 12 chr2 164349697 164350698 -88905885 - L1PB1 LINE L1 -5815 1048 6 542 182 45 65 chr2 164350716 164350870 -88905713 - MLT1A2 LTR MaLR -216 158 8 2926 241 46 36 chr2 164350908 164350961 -88905622 - L1M4c LINE L1 -2833 3549 3498 2248 110 3 28 chr2 164350961 164351279 -88905304 - AluSx SINE Alu -2 310 1 2926 241 46 36 chr2 164351279 164352113 -88904470 - L1M4c LINE L1 -2884 3498 2674 2178 122 0 7 chr2 164352113 164352408 -88904175 - AluSx SINE Alu -19 293 1 2926 241 46 36 chr2 164352408 164352631 -88903952 - L1M4c LINE L1 -3708 2674 2455 2225 113 0 39 chr2 164352631 164352942 -88903641 - AluSq SINE Alu -14 299 1 2926 241 46 36 chr2 164352942 164353165 -88903418 - L1M4c LINE L1 -3927 2455 2195 1293 104 0 0 chr2 164353183 164353375 -88903208 - L1MA2 LINE L1 0 7723 7532 3050 110 9 9 chr2 164353378 164353841 -88902742 - L1PA11 LINE L1 -2 6172 5710 14031 156 20 20 chr2 164353842 164354651 -88901932 - L1MA2 LINE L1 -172 7551 6743 2155 96 48 0 chr2 164354651 164354942 -88901641 - AluSx SINE Alu -7 305 1 14031 156 20 20 chr2 164354942 164357367 -88899216 - L1MA2 LINE L1 -980 6743 4318 2231 118 48 25 chr2 164357367 164357723 -88898860 + THE1B LTR MaLR 1 364 0 11589 93 12 4 chr2 164357724 164359290 -88897293 + THE1B-int LTR MaLR 2 1580 0 2015 131 49 55 chr2 164359290 164359579 -88897004 + THE1B LTR MaLR 1 289 -75 2296 114 0 0 chr2 164359579 164359878 -88896705 - AluSc SINE Alu -10 299 1 2015 131 49 55 chr2 164359878 164359954 -88896629 + THE1B LTR MaLR 289 364 0 14031 156 20 20 chr2 164359954 164360002 -88896581 - L1MA2 LINE L1 -3404 4319 4272 2308 67 0 0 chr2 164360002 164360309 -88896274 - AluY SINE Alu 0 307 1 14031 156 20 20 chr2 164360309 164363106 -88893477 - L1MA2 LINE L1 -3451 4272 1434 330 259 47 35 chr2 164363094 164363133 -88893450 - L1M4c LINE L1 -4157 2227 2190 * 2169 207 13 103 chr2 164363133 164363742 -88892841 - MLT2B3 LTR ERVL 0 554 1 330 259 47 35 chr2 164363742 164363872 -88892711 - L1M4c LINE L1 -4194 2190 2056 587 198 9 0 chr2 164363963 164364069 -88892514 - U6 snRNA snRNA 0 107 1 946 321 96 45 chr2 164364089 164364861 -88891722 - L2 LINE L2 -611 2703 1893 925 258 179 25 chr2 164364861 164365337 -88891246 + MLT1H1 LTR MaLR 1 549 -6 249 320 92 42 chr2 164365363 164365583 -88891000 - L2 LINE L2 -1426 1888 1647 1754 172 0 20 chr2 164365583 164365880 -88890703 + AluJo SINE Alu 9 299 -13 249 320 92 42 chr2 164365880 164365965 -88890618 - L2 LINE L2 -1667 1647 1568 592 271 21 27 chr2 164366217 164366405 -88890178 - MLT1L LTR MaLR -112 503 317 381 324 58 0 chr2 164366493 164366632 -88889951 + MIR SINE MIR 86 232 -30 1686 34 19 0 chr2 164366740 164366949 -88889634 + L1PA7 LINE L1 5941 6153 -1 200 271 29 93 chr2 164368924 164369010 -88887573 + MIR SINE MIR 82 157 -105 1494 193 21 70 chr2 164369010 164369394 -88887189 - MLT1A1 LTR MaLR 0 365 1 200 271 29 93 chr2 164369394 164369447 -88887136 + MIR SINE MIR 157 212 -50 323 259 23 46 chr2 164370990 164371121 -88885462 + MIR SINE MIR 79 206 -56 2177 128 88 20 chr2 164371825 164372224 -88884359 - MSTA LTR MaLR -2 426 1 2036 176 37 42 chr2 164372259 164372691 -88883892 - MSTB1 LTR MaLR -2 430 1 411 335 15 35 chr2 164372736 164372939 -88883644 - MIR SINE MIR -32 230 32 1022 186 6 0 chr2 164372942 164373119 -88883464 + MER45A DNA AcHobo 1 178 0 24 53 0 0 chr2 164373785 164373823 -88882760 + AT_rich Low_complexity Low_complexity 1 38 0 440 252 84 0 chr2 164374069 164374212 -88882371 - L1ME LINE L1 -454 5667 5513 23 0 0 0 chr2 164375419 164375442 -88881141 + AT_rich Low_complexity Low_complexity 1 23 0 391 329 52 33 chr2 164375720 164375933 -88880650 - MERVL LTR ERVL -725 4760 4544 933 334 48 48 chr2 164375941 164376605 -88879978 + ERVL LTR ERVL 796 1459 -4305 1152 245 68 68 chr2 164376633 164376694 -88879889 - L1MEc LINE L1 -4972 1424 1364 1967 135 11 4 chr2 164376694 164377008 -88879575 + AluSx SINE Alu 1 316 0 1152 245 68 68 chr2 164377008 164377339 -88879244 - L1MEc LINE L1 -5032 1364 1027 2066 129 4 0 chr2 164377339 164377652 -88878931 - AluSx SINE Alu 0 314 1 1152 245 68 68 chr2 164377652 164377770 -88878813 - L1MEc LINE L1 -5368 1028 911 569 252 0 0 chr2 164377771 164377878 -88878705 + Tigger3(Golem) DNA MER2_type 2 108 -2921 467 107 133 0 chr2 164377875 164377950 -88878633 + Tigger3(Golem) DNA MER2_type 2281 2365 -664 * 186 133 0 0 chr2 164378116 164378146 -88878437 + (GGGA)n Simple_repeat Simple_repeat 4 33 0 810 92 0 9 chr2 164378242 164378351 -88878232 - AluSg/x SINE Alu -17 293 186 455 278 0 0 chr2 164378373 164378488 -88878095 - L1MEc LINE L1 -5869 527 413 345 264 56 16 chr2 164378807 164378932 -88877651 - MLT1K LTR MaLR -304 284 155 1141 228 174 38 chr2 164379375 164379818 -88876765 - LTR33 LTR ERVL -17 504 2 231 36 0 0 chr2 164380132 164380160 -88876423 + (A)n Simple_repeat Simple_repeat 1 28 0 591 280 47 19 chr2 164381521 164381600 -88874983 + L1MC4 LINE L1 6470 6545 -1497 2279 128 0 0 chr2 164381600 164381912 -88874671 + AluSx SINE Alu 1 312 0 591 280 47 19 chr2 164381912 164382046 -88874537 + L1MC4 LINE L1 6545 6689 -1353 397 241 17 17 chr2 164382149 164382265 -88874318 + MIR SINE MIR 146 261 -1 335 229 59 59 chr2 164382715 164382833 -88873750 - L2 LINE L2 -30 3283 3166 319 304 145 0 chr2 164382959 164383097 -88873486 + MIR SINE MIR 105 262 0 431 378 49 18 chr2 164383474 164383802 -88872781 - L2 LINE L2 -510 2804 2467 2396 56 0 56 chr2 164384352 164384674 -88871909 + AluY SINE Alu 1 304 -7 471 278 87 48 chr2 164385304 164385534 -88871049 - MIR SINE MIR -14 248 10 1813 110 98 0 chr2 164385790 164386054 -88870529 - AluSg SINE Alu 0 310 21 335 129 9 4 chr2 164386054 164386114 -88870469 - Alu SINE Alu -257 45 2 21 0 0 0 chr2 164388274 164388295 -88868288 + AT_rich Low_complexity Low_complexity 1 21 0 2337 101 3 0 chr2 164388932 164389239 -88867344 - AluSx SINE Alu -4 308 1 292 310 96 43 chr2 164389583 164389770 -88866813 - MLT1K LTR MaLR -254 334 138 255 136 34 85 chr2 164389737 164389796 -88866787 - MLT1K LTR MaLR -349 239 184 * 195 42 0 0 chr2 164389841 164389865 -88866718 + (GGGA)n Simple_repeat Simple_repeat 2 25 0 218 143 143 0 chr2 164389948 164389990 -88866593 + L2 LINE L2 3265 3312 -1 2259 109 10 0 chr2 164390438 164390742 -88865841 - AluSx SINE Alu -5 307 1 259 264 151 9 chr2 164390756 164390862 -88865721 - L1ME LINE L1 -401 5720 5600 1480 173 71 35 chr2 164391187 164391470 -88865113 - AluJo SINE Alu -19 293 1 364 188 100 0 chr2 164391537 164391617 -88864966 + Zaphod DNA AcHobo 3944 4031 0 23 51 0 34 chr2 164393242 164393262 -88863321 + AT_rich Low_complexity Low_complexity 1 20 -37 4330 136 21 8 chr2 164393262 164393760 -88862823 - L1MB2 LINE L1 -17 6154 5643 2064 141 136 21 chr2 164393760 164394143 -88862440 + MSTA LTR MaLR 2 428 0 4330 136 21 8 chr2 164394143 164394299 -88862284 - L1MB2 LINE L1 -528 5643 5491 23 51 0 34 chr2 164394299 164394337 -88862246 + AT_rich Low_complexity Low_complexity 20 57 0 2175 113 7 0 chr2 164394521 164394813 -88861770 - AluSq SINE Alu -19 294 1 210 207 52 0 chr2 164396612 164396670 -88859913 + CT-rich Low_complexity Low_complexity 3 63 0 1830 216 25 43 chr2 164397005 164397450 -88859133 - LTR47B LTR ERVL -6 437 1 441 0 0 0 chr2 164397814 164397863 -88858720 + (CA)n Simple_repeat Simple_repeat 2 50 0 242 253 129 37 chr2 164397986 164398131 -88858452 + L1MD2 LINE L1 6008 6166 0 768 176 30 0 chr2 164399192 164399323 -88857260 - Charlie4 DNA MER1_type -7 1954 1820 311 342 0 9 chr2 164399348 164399462 -88857121 - Charlie8 DNA MER1_type -2210 207 95 362 267 163 45 chr2 164400276 164400352 -88856231 + MER112 DNA MER1_type 2 68 -192 2365 80 3 3 chr2 164400352 164400651 -88855932 + AluSg SINE Alu 1 299 -11 362 267 163 45 chr2 164400651 164400795 -88855788 + MER112 DNA MER1_type 68 248 -12 224 271 47 24 chr2 164400995 164401080 -88855503 - L2 LINE L2 -2 3311 3225 396 314 103 13 chr2 164401632 164401788 -88854795 - MIR3 SINE MIR -5 203 34 351 268 65 43 chr2 164402199 164402337 -88854246 - MER5A DNA MER1_type -12 177 37 22 0 0 0 chr2 164403021 164403043 -88853540 + AT_rich Low_complexity Low_complexity 1 22 0 2362 87 3 3 chr2 164403094 164403394 -88853189 + AluSx SINE Alu 1 300 -12 2402 118 9 3 chr2 164404908 164405255 -88851328 - THE1A LTR MaLR 0 355 7 12837 82 9 1 chr2 164405262 164406830 -88849753 - THE1A-int LTR MaLR 0 1580 1 2031 128 7 7 chr2 164406830 164407128 -88849455 - THE1A LTR MaLR 0 355 58 494 206 10 0 chr2 164407728 164407825 -88848758 + MER94 DNA DNA 1 98 -36 21 0 0 0 chr2 164407970 164407991 -88848592 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 164409257 164409279 -88847304 + AT_rich Low_complexity Low_complexity 1 22 0 541 325 203 10 chr2 164410147 164410532 -88846051 + L3 LINE CR1 1061 1519 -58 198 0 0 0 chr2 164411683 164411705 -88844878 + (CAGC)n Simple_repeat Simple_repeat 2 23 0 2411 75 7 0 chr2 164413333 164413628 -88842955 - AluSg SINE Alu -13 297 1 2212 95 10 13 chr2 164415267 164415571 -88841012 + AluSg SINE Alu 1 303 -7 2534 165 28 28 chr2 164415585 164416052 -88840531 - MLT1C LTR MaLR 0 467 1 385 299 35 28 chr2 164417417 164417561 -88839022 + MIR3 SINE MIR 17 161 -47 391 228 317 14 chr2 164417562 164417707 -88838876 - MIR SINE MIR -13 249 61 366 260 83 0 chr2 164417814 164417910 -88838673 + MER5A DNA MER1_type 9 112 -77 232 391 31 1 chr2 164418977 164419128 -88837455 + MIR SINE MIR 9 161 -63 396 289 52 15 chr2 164419139 164419274 -88837309 + MIR SINE MIR 67 206 -56 21 89 0 0 chr2 164419400 164419456 -88837127 + AT_rich Low_complexity Low_complexity 1 56 0 478 310 84 24 chr2 164422003 164422216 -88834367 + MIR SINE MIR 31 256 -6 235 300 0 0 chr2 164425957 164426017 -88830566 - L2 LINE L2 -5 3308 3249 1809 165 11 4 chr2 164426502 164426781 -88829802 + AluJb SINE Alu 5 285 -27 722 225 0 0 chr2 164428691 164428820 -88827763 + FLAM_A SINE Alu 1 129 -4 1412 98 60 0 chr2 164429000 164429234 -88827349 + L1MA2 LINE L1 6052 6299 -5 420 20 0 0 chr2 164429332 164429381 -88827202 + (TG)n Simple_repeat Simple_repeat 2 50 0 2083 111 0 0 chr2 164429675 164429993 -88826590 + AluSg SINE Alu 1 318 0 569 116 22 3 chr2 164430224 164430366 -88826217 + MER53 DNA DNA 1 189 0 241 250 53 40 chr2 164430660 164430736 -88825847 + L2 LINE L2 3196 3272 0 * 351 291 56 3 chr2 164430724 164430859 -88825724 + MIR SINE MIR 7 160 -66 186 103 0 0 chr2 164430900 164430929 -88825654 + (CAT)n Simple_repeat Simple_repeat 3 31 0 1123 216 5 0 chr2 164430935 164431157 -88825426 - MER58A DNA MER1_type -1 223 1 463 338 196 5 chr2 164431454 164431673 -88824910 - MIR SINE MIR 0 262 2 201 39 0 0 chr2 164431756 164431782 -88824801 + (TGGA)n Simple_repeat Simple_repeat 4 29 0 1622 137 49 19 chr2 164432204 164432467 -88824116 + AluSx SINE Alu 42 312 0 1698 114 19 35 chr2 164432967 164433206 -88823377 - L1MB3 LINE L1 -17 6166 5932 2583 115 53 24 chr2 164433206 164433622 -88822961 - MSTC LTR MaLR 0 428 1 1698 114 19 35 chr2 164433622 164433698 -88822885 - L1MB3 LINE L1 -251 5932 5856 4037 165 34 20 chr2 164434368 164434604 -88821979 - L1MC3 LINE L1 -2 7783 7552 1559 231 53 29 chr2 164434604 164435059 -88821524 - MLT1C LTR MaLR -1 466 1 4037 165 34 20 chr2 164435059 164435711 -88820872 - L1MC3 LINE L1 -233 7552 6883 717 112 20 33 chr2 164435722 164435874 -88820709 - L1MC3 LINE L1 -68 7717 7568 1027 194 80 48 chr2 164436015 164436184 -88820399 + MLT1B LTR MaLR 1 163 -227 2535 67 0 6 chr2 164436184 164436497 -88820086 + AluY SINE Alu 1 311 0 1027 194 80 48 chr2 164436497 164436548 -88820035 + MLT1B LTR MaLR 163 211 -179 333 0 0 0 chr2 164436548 164436585 -88819998 + (TC)n Simple_repeat Simple_repeat 1 37 0 279 0 0 0 chr2 164436594 164436625 -88819958 + (TG)n Simple_repeat Simple_repeat 2 32 0 1027 194 80 48 chr2 164436625 164436836 -88819747 + MLT1B LTR MaLR 218 390 0 841 113 56 38 chr2 164436837 164436997 -88819586 - L1MC3 LINE L1 -909 6876 6714 200 260 40 0 chr2 164438247 164438297 -88818286 + (CATG)n Simple_repeat Simple_repeat 3 54 0 494 323 8 15 chr2 164438330 164438590 -88817993 + MIR SINE MIR 4 261 -1 1951 181 22 8 chr2 164438776 164439141 -88817442 + MLT1A2 LTR MaLR 1 370 -4 379 323 31 0 chr2 164439336 164439463 -88817120 - MIR3 SINE MIR 0 208 78 738 253 6 0 chr2 164440152 164440326 -88816257 + MER58A DNA MER1_type 45 219 -5 979 230 5 0 chr2 164440330 164440534 -88816049 + MER3 DNA MER1_type 5 209 0 664 324 88 0 chr2 164441310 164441572 -88815011 + L2 LINE L2 3028 3312 -1 6748 65 16 1 chr2 164441772 164443204 -88813379 - L1PA7 LINE L1 0 6154 4711 360 78 0 0 chr2 164443204 164443255 -88813328 + L1P3 LINE L1 20 70 -6391 222 205 0 0 chr2 164445545 164445584 -88810999 + GA-rich Low_complexity Low_complexity 2 40 0 25 0 0 0 chr2 164445927 164445952 -88810631 + AT_rich Low_complexity Low_complexity 1 25 0 203 161 0 0 chr2 164446764 164446795 -88809788 + MIR3 SINE MIR 124 154 -54 342 0 0 0 chr2 164446940 164446978 -88809605 + (TA)n Simple_repeat Simple_repeat 2 39 0 2439 55 21 0 chr2 164446980 164447269 -88809314 - AluY SINE Alu 0 311 17 1307 245 112 56 chr2 164447398 164447924 -88808659 + LTR41 LTR ERVL 1 556 -217 1170 183 93 11 chr2 164447924 164448192 -88808391 - MLT1A1 LTR MaLR 0 365 76 852 178 13 98 chr2 164448193 164448429 -88808154 + LTR41 LTR ERVL 552 767 -6 520 294 55 7 chr2 164448595 164448741 -88807842 - MIR3 SINE MIR -54 154 2 19834 158 30 23 chr2 164448777 164449453 -88807130 + L1MA2 LINE L1 15 685 -7038 2272 110 13 0 chr2 164449453 164449753 -88806830 + AluSx SINE Alu 7 310 -2 19834 158 30 23 chr2 164449753 164450816 -88805767 + L1MA2 LINE L1 685 1739 -5984 324 0 0 0 chr2 164450816 164450852 -88805731 + (CAGA)n Simple_repeat Simple_repeat 2 37 0 19834 158 30 23 chr2 164450852 164452067 -88804516 + L1MA2 LINE L1 1739 2944 -4779 1531 224 3 19 chr2 164452067 164452384 -88804199 + AluJb SINE Alu 1 312 0 19834 158 30 23 chr2 164452384 164452862 -88803721 + L1MA2 LINE L1 2944 3417 -4306 339 25 0 0 chr2 164452862 164452902 -88803681 + (CA)n Simple_repeat Simple_repeat 1 40 0 19834 158 30 23 chr2 164452902 164457063 -88799520 + L1MA2 LINE L1 3417 7680 -43 1989 133 77 14 chr2 164457063 164457416 -88799167 + THE1C LTR MaLR 1 375 0 19834 158 30 23 chr2 164457416 164457461 -88799122 + L1MA2 LINE L1 7680 7723 0 193 279 139 23 chr2 164458356 164458485 -88798098 - MIR SINE MIR 0 262 119 23 68 0 0 chr2 164459135 164459179 -88797404 + AT_rich Low_complexity Low_complexity 1 44 0 3147 126 30 0 chr2 164459535 164460065 -88796518 + L1MA3 LINE L1 5535 6080 -225 1916 92 7 52 chr2 164460075 164460128 -88796455 - L1PB1 LINE L1 -2 6865 6811 2086 122 10 10 chr2 164460128 164460424 -88796159 - AluSx SINE Alu -16 296 1 1916 92 7 52 chr2 164460424 164460676 -88795907 - L1PB1 LINE L1 -56 6811 6574 7175 53 8 0 chr2 164460676 164461889 -88794694 + L1PA7 LINE L1 4934 6153 -1 525 82 47 0 chr2 164461890 164461975 -88794608 - L1PB1 LINE L1 -281 6586 6498 249 197 0 0 chr2 164461975 164462036 -88794547 + (TA)n Simple_repeat Simple_repeat 2 62 0 13753 162 42 7 chr2 164462050 164468202 -88788381 - L1PB1 LINE L1 -360 6507 1 1211 141 12 52 chr2 164468204 164468395 -88788188 + L1MA3 LINE L1 6067 6264 -41 2388 51 3 10 chr2 164468395 164468691 -88787892 + AluY SINE Alu 1 294 -17 180 0 0 0 chr2 164468697 164468717 -88787866 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 1211 141 12 52 chr2 164468717 164468767 -88787816 + L1MA3 LINE L1 6269 6305 0 448 297 115 35 chr2 164469084 164469623 -88786960 + L1MEd LINE L1 309 890 -5229 369 330 11 11 chr2 164469997 164470176 -88786407 - MLT1H LTR MaLR -363 186 8 486 298 71 17 chr2 164470207 164470712 -88785871 + L1MEd LINE L1 993 1626 -864 1982 132 0 0 chr2 164471122 164471394 -88785189 - AluSx SINE Alu -39 273 2 330 26 0 0 chr2 164471442 164471481 -88785102 + (CA)n Simple_repeat Simple_repeat 2 40 0 510 299 63 21 chr2 164471673 164472008 -88784575 + L1MC/D LINE L1 5258 5606 -2202 284 139 19 46 chr2 164472120 164472228 -88784355 + (TA)n Simple_repeat Simple_repeat 1 105 0 22 35 0 0 chr2 164472507 164472536 -88784047 + AT_rich Low_complexity Low_complexity 1 29 0 675 272 35 31 chr2 164473695 164473923 -88782660 + MIR SINE MIR 8 236 -26 22 0 0 0 chr2 164474466 164474488 -88782095 + AT_rich Low_complexity Low_complexity 1 22 0 2300 92 0 0 chr2 164474491 164474806 -88781777 + AluSx SINE Alu 1 315 0 27 62 0 0 chr2 164475218 164475266 -88781317 + AT_rich Low_complexity Low_complexity 1 48 0 214 244 0 0 chr2 164475322 164475363 -88781220 + L2 LINE L2 3267 3307 -6 195 344 19 69 chr2 164477160 164477320 -88779263 + L3b LINE CR1 1161 1312 -271 322 307 0 0 chr2 164477355 164477443 -88779140 + L2 LINE L2 3185 3272 0 524 311 22 0 chr2 164481576 164481711 -88774872 + MER5B DNA MER1_type 40 177 -1 615 232 166 7 chr2 164481853 164482004 -88774579 - MER5A DNA MER1_type 0 189 15 197 286 151 59 chr2 164482449 164482564 -88774019 - L2 LINE L2 -222 3050 2925 304 296 39 67 chr2 164482564 164482743 -88773840 - MER5B DNA MER1_type 0 178 5 2001 130 4 0 chr2 164482814 164483091 -88773492 + AluSx SINE Alu 1 278 -34 939 85 0 0 chr2 164483092 164483222 -88773361 + (GGGAA)n Simple_repeat Simple_repeat 4 133 0 527 271 114 12 chr2 164483597 164483763 -88772820 + MER5A DNA MER1_type 1 183 -6 343 256 0 49 chr2 164483778 164483860 -88772723 - MIR SINE MIR -157 105 28 380 312 71 0 chr2 164483911 164484065 -88772518 + MIR SINE MIR 37 201 -61 309 225 138 51 chr2 164484933 164485071 -88771512 - L1ME4a LINE L1 -6 6115 5966 220 326 96 30 chr2 164485530 164485666 -88770917 - MIR3 SINE MIR -73 135 14 207 167 0 0 chr2 164485801 164485843 -88770740 + GA-rich Low_complexity Low_complexity 3 44 0 346 256 67 110 chr2 164486355 164486571 -88770012 - MIR SINE MIR -8 254 44 180 47 47 47 chr2 164486604 164486647 -88769936 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 318 87 0 0 chr2 164486762 164486808 -88769775 + (CA)n Simple_repeat Simple_repeat 1 46 0 417 20 0 0 chr2 164487062 164487112 -88769471 + (TG)n Simple_repeat Simple_repeat 2 51 0 1117 242 43 70 chr2 164487523 164487940 -88768643 - MLT1J2 LTR MaLR -44 406 1 399 274 40 0 chr2 164488060 164488184 -88768399 + L1M4 LINE L1 2912 3040 -3106 6822 43 20 0 chr2 164488186 164489333 -88767250 - L1PA5 LINE L1 -7 6147 5003 1345 225 82 27 chr2 164489352 164490058 -88766525 - L1MEc LINE L1 -3570 2645 1966 * 2964 219 11 0 chr2 164490051 164490781 -88765802 + L1M4 LINE L1 4409 5146 -1000 223 378 65 20 chr2 164492099 164492345 -88764238 - MIR SINE MIR 0 262 6 255 307 79 39 chr2 164494835 164494962 -88761621 - MIR3 SINE MIR -1 207 76 2058 158 3 3 chr2 164497903 164498213 -88758370 + AluSx SINE Alu 1 310 -2 946 196 0 6 chr2 164498363 164498542 -88758041 - MER58A DNA MER1_type -1 223 46 552 262 54 13 chr2 164498600 164498749 -88757834 - L2 LINE L2 0 3313 3159 663 201 40 25 chr2 164500475 164500674 -88755909 + MER20B DNA MER1_type 582 783 0 421 170 38 19 chr2 164500762 164500868 -88755715 + Charlie8 DNA MER1_type 49 156 -2261 187 289 14 99 chr2 164502211 164502323 -88754260 - MIR SINE MIR -63 145 76 2147 265 165 4 chr2 164502445 164503335 -88753248 - L2 LINE L2 -303 3010 1984 2105 129 10 16 chr2 164503584 164503894 -88752689 - AluSx SINE Alu -4 308 1 532 262 112 115 chr2 164505327 164505632 -88750951 + L2 LINE L2 3010 3313 0 309 308 7 7 chr2 164506742 164506867 -88749716 - MIR SINE MIR -83 125 1 367 298 112 6 chr2 164507597 164507758 -88748825 - MIR3 SINE MIR -15 193 16 1425 173 24 97 chr2 164507934 164508264 -88748319 - AluJo SINE Alu -6 306 1 2050 87 0 32 chr2 164508372 164508649 -88747934 + AluY SINE Alu 38 305 -6 268 279 157 76 chr2 164508922 164509094 -88747489 - MER5A DNA MER1_type 0 189 4 363 306 52 8 chr2 164510578 164510712 -88745871 + MIR SINE MIR 63 202 -60 5368 142 36 10 chr2 164510781 164511835 -88744748 + L1MA7 LINE L1 5217 6290 -1 569 328 50 11 chr2 164514699 164514961 -88741622 + L2 LINE L2 2384 2655 -659 377 258 57 94 chr2 164515208 164515367 -88741216 + MER91A DNA MER1_type 43 195 -1 474 341 111 22 chr2 164515383 164515744 -88740839 + L2 LINE L2 2921 3313 0 261 248 195 40 chr2 164516844 164516993 -88739590 - MER5B DNA MER1_type -4 174 3 265 300 100 0 chr2 164517101 164517191 -88739392 + L2 LINE L2 3143 3241 -31 58 78 0 0 chr2 164517207 164517335 -88739248 + AT_rich Low_complexity Low_complexity 1 128 0 706 207 154 0 chr2 164517973 164518219 -88738364 + LTR33 LTR ERVL 238 521 0 279 370 28 62 chr2 164518513 164518870 -88737713 - L3 LINE CR1 -1136 441 97 22 0 0 0 chr2 164519105 164519127 -88737456 + AT_rich Low_complexity Low_complexity 1 22 0 1791 160 22 22 chr2 164520699 164521061 -88735522 + L1MB3 LINE L1 5794 6155 -28 329 313 117 18 chr2 164522308 164522471 -88734112 + L1MEd LINE L1 605 783 -5336 1865 243 81 6 chr2 164522591 164523224 -88733359 + L1PA5 LINE L1 6 685 -6178 482 171 226 0 chr2 164523225 164523433 -88733150 + L1PA5 LINE L1 990 1393 -5470 1696 167 107 31 chr2 164523476 164523896 -88732687 + LTR10A LTR ERV1 97 548 -61 13938 188 21 11 chr2 164523909 164526080 -88730503 + L1PA5 LINE L1 1390 3537 -3330 2386 81 3 0 chr2 164526080 164526376 -88730207 + AluY SINE Alu 1 297 -14 13938 188 21 11 chr2 164526376 164529197 -88727386 + L1PA5 LINE L1 3537 6487 -380 396 0 0 0 chr2 164529201 164529245 -88727338 + (TA)n Simple_repeat Simple_repeat 1 44 0 995 33 0 0 chr2 164529751 164529872 -88726711 - L1PA5 LINE L1 -1 6153 6033 558 49 85 0 chr2 164529872 164529954 -88726629 + L1PA5 LINE L1 6671 6759 -111 241 82 0 20 chr2 164530958 164531007 -88725576 + LTR66 LTR ERVL 393 440 -170 300 66 92 13 chr2 164531013 164531089 -88725494 + (CATAT)n Simple_repeat Simple_repeat 1 82 0 2539 93 3 13 chr2 164531103 164531481 -88725102 + L1PB1 LINE L1 5778 6151 0 267 79 0 0 chr2 164531530 164531568 -88725015 + (ATG)n Simple_repeat Simple_repeat 2 39 0 687 237 15 61 chr2 164531610 164531808 -88724775 - MIR SINE MIR -67 195 7 379 267 82 66 chr2 164531898 164532481 -88724102 + L1MEd LINE L1 948 1629 -861 16803 141 12 35 chr2 164532796 164534152 -88722431 + L1M1 LINE L1 13 1399 -6166 1775 145 4 11 chr2 164534152 164534428 -88722155 + AluSq SINE Alu 1 274 -39 16803 141 12 35 chr2 164534428 164535947 -88720636 + L1M1 LINE L1 1399 2822 -4743 778 300 30 9 chr2 164536150 164536380 -88720203 + MIR SINE MIR 28 262 0 481 218 96 80 chr2 164536513 164536939 -88719644 - MLT1H LTR MaLR -106 436 25 641 319 76 23 chr2 164538292 164538960 -88717623 + ERVL LTR ERVL 4639 5333 -152 288 0 0 0 chr2 164538991 164539023 -88717560 + (CA)n Simple_repeat Simple_repeat 2 33 0 255 281 174 25 chr2 164539392 164539588 -88716995 + LTR67 LTR ERVL 33 257 -300 272 318 8 30 chr2 164539774 164539906 -88716677 + LTR67 LTR ERVL 429 557 0 243 306 0 0 chr2 164539906 164539968 -88716615 + MIR3 SINE MIR 144 205 -3 22 35 0 0 chr2 164539971 164540000 -88716583 + AT_rich Low_complexity Low_complexity 1 29 0 338 224 9 0 chr2 164540065 164540181 -88716402 + (TA)n Simple_repeat Simple_repeat 1 117 0 7516 96 6 0 chr2 164540585 164541699 -88714884 + L1P LINE L1 1721 2841 -3305 2290 88 0 50 chr2 164541699 164542019 -88714564 + AluY SINE Alu 1 304 -7 1696 70 0 0 chr2 164542019 164542234 -88714349 + L1PA7 LINE L1 5939 6153 -1 6746 40 1 1 chr2 164544109 164544933 -88711650 + L1PA4 LINE L1 5332 6155 0 246 341 110 26 chr2 164545626 164546054 -88710529 + L2 LINE L2 1527 1990 -1324 1021 327 116 34 chr2 164546090 164547169 -88709414 - L2 LINE L2 0 3313 2152 195 292 97 35 chr2 164547173 164547317 -88709266 + L2 LINE L2 2909 3061 -211 188 379 0 0 chr2 164547633 164547691 -88708892 + L2 LINE L2 3184 3241 -31 2010 133 12 3 chr2 164548785 164549117 -88707466 + L1MA4 LINE L1 5955 6289 -11 2083 130 0 3 chr2 164549855 164550147 -88706436 + AluSc SINE Alu 1 291 -18 26 30 0 0 chr2 164550443 164550476 -88706107 + AT_rich Low_complexity Low_complexity 1 33 0 236 333 95 0 chr2 164550525 164550672 -88705911 + L1ME4a LINE L1 5664 5824 -297 305 145 159 58 chr2 164550778 164550916 -88705667 + L1ME4a LINE L1 5959 6110 -11 1236 93 11 0 chr2 164550917 164551099 -88705484 + L1PA13 LINE L1 5974 6157 -6 311 282 60 8 chr2 164552646 164552763 -88703820 - MIR3 SINE MIR 0 208 86 2449 295 164 14 chr2 164552847 164554480 -88702103 - L2 LINE L2 0 3313 1422 845 242 116 5 chr2 164554962 164555177 -88701406 + MIR SINE MIR 3 241 -21 39138 51 6 2 chr2 164555472 164560677 -88695906 - L1P LINE L1 -922 5224 2 281 352 181 34 chr2 164560678 164561059 -88695524 - L2 LINE L2 -2678 636 200 350 248 98 23 chr2 164561396 164561529 -88695054 - L1ME4a LINE L1 -1 6120 5978 341 307 53 0 chr2 164563376 164563490 -88693093 - MIR3 SINE MIR -3 205 86 357 232 89 47 chr2 164563490 164563747 -88692836 - LTR41 LTR ERVL 0 795 510 748 202 39 6 chr2 164564004 164564182 -88692401 - LTR41 LTR ERVL -589 184 1 307 194 30 0 chr2 164564333 164564400 -88692183 + L1MC1 LINE L1 6260 6328 -5 498 255 74 47 chr2 164565116 164565265 -88691318 + MIR3 SINE MIR 19 171 -37 21 0 0 0 chr2 164565427 164565448 -88691135 + AT_rich Low_complexity Low_complexity 1 21 0 2234 86 0 10 chr2 164565806 164566097 -88690486 + AluY SINE Alu 1 288 -23 366 212 0 0 chr2 164566101 164566200 -88690383 + (TA)n Simple_repeat Simple_repeat 1 99 0 472 96 27 0 chr2 164566218 164566291 -88690292 - MER116 DNA Mariner -1 79 5 887 277 41 8 chr2 164566437 164566679 -88689904 + MIR SINE MIR 2 251 -11 866 192 0 6 chr2 164566747 164566914 -88689669 + MLT1B LTR MaLR 225 390 0 1485 62 0 0 chr2 164566947 164567124 -88689459 + AluSg/x SINE Alu 134 310 -2 31 26 0 0 chr2 164567182 164567220 -88689363 + AT_rich Low_complexity Low_complexity 1 38 0 1063 217 132 15 chr2 164567431 164567758 -88688825 - MLT1A1 LTR MaLR 0 365 1 717 40 0 30 chr2 164567867 164567966 -88688617 + L1PA5 LINE L1 6057 6152 -2 364 358 7 22 chr2 164568036 164568173 -88688410 - MER91A DNA MER1_type -61 135 1 366 344 113 13 chr2 164568230 164568541 -88688042 - L1M4 LINE L1 -1133 5013 4672 207 0 0 0 chr2 164569365 164569388 -88687195 + (T)n Simple_repeat Simple_repeat 1 23 0 650 222 45 45 chr2 164570358 164570534 -88686049 + MER5B DNA MER1_type 3 178 0 24 0 0 0 chr2 164571257 164571281 -88685302 + AT_rich Low_complexity Low_complexity 1 24 0 611 346 103 18 chr2 164572717 164573174 -88683409 - LTR67 LTR ERVL -18 539 44 370 276 12 77 chr2 164573248 164573418 -88683165 - L2 LINE L2 -809 2505 2347 2039 145 3 3 chr2 164573553 164573850 -88682733 + AluSc SINE Alu 1 297 -12 23 33 0 0 chr2 164574635 164574665 -88681918 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr2 164574737 164574761 -88681822 + AT_rich Low_complexity Low_complexity 1 24 0 5193 180 65 33 chr2 164574830 164577198 -88679385 + L1MB4 LINE L1 3733 6179 -1 252 186 174 0 chr2 164577278 164577364 -88679219 + L1MC4 LINE L1 7942 8042 0 463 327 101 38 chr2 164577374 164577692 -88678891 + HAL1b LINE L1 73 410 -938 23 33 0 0 chr2 164578048 164578078 -88678505 + AT_rich Low_complexity Low_complexity 1 30 0 23 54 0 0 chr2 164578244 164578281 -88678302 + AT_rich Low_complexity Low_complexity 1 37 0 1882 154 7 3 chr2 164578303 164578602 -88677981 - AluSx SINE Alu -12 300 1 799 282 6 2 chr2 164578609 164578898 -88677685 + L1MC4 LINE L1 6615 6824 -1137 794 264 82 64 chr2 164578908 164579359 -88677224 + MLT1G1 LTR MaLR 16 426 -116 1901 213 57 25 chr2 164579359 164579847 -88676736 + MLT1D LTR MaLR 2 505 0 794 264 82 64 chr2 164579847 164579960 -88676623 + MLT1G1 LTR MaLR 426 536 -6 1130 231 49 102 chr2 164579963 164580712 -88675871 + L1MC5 LINE L1 6818 7527 -434 1372 338 84 8 chr2 164580770 164581494 -88675089 - L2 LINE L2 -1156 2158 1380 728 255 208 21 chr2 164582193 164582707 -88673876 - L1ME3A LINE L1 -208 5962 5353 2371 150 19 0 chr2 164582743 164583164 -88673419 + L1P LINE L1 4850 5278 -868 332 361 60 53 chr2 164585949 164586251 -88670332 - L2 LINE L2 -574 2740 2437 181 297 94 22 chr2 164586267 164586405 -88670178 + L2 LINE L2 2128 2275 -1039 21 36 0 0 chr2 164586416 164586444 -88670139 + AT_rich Low_complexity Low_complexity 1 28 0 480 292 115 6 chr2 164586659 164586856 -88669727 - MIR SINE MIR -13 249 32 1304 140 17 162 chr2 164587050 164587457 -88669126 - MER7A DNA MER2_type 0 346 1 247 322 35 0 chr2 164588141 164588228 -88668355 + L2 LINE L2 3224 3313 0 26 0 0 0 chr2 164588308 164588334 -88668249 + AT_rich Low_complexity Low_complexity 1 26 0 311 160 13 0 chr2 164588399 164588474 -88668109 + (TCCA)n Simple_repeat Simple_repeat 3 78 0 32 26 0 0 chr2 164588679 164588718 -88667865 + AT_rich Low_complexity Low_complexity 1 39 0 30 45 0 0 chr2 164588775 164588819 -88667764 + AT_rich Low_complexity Low_complexity 1 44 0 766 248 59 5 chr2 164590343 164590545 -88666038 + MIR SINE MIR 37 249 -13 401 270 48 96 chr2 164590517 164590737 -88665846 - MIR SINE MIR -51 211 6 * 2050 93 45 0 chr2 164591705 164591974 -88664609 - AluSc SINE Alu -7 302 22 183 217 65 0 chr2 164592152 164592198 -88664385 + MER5A DNA MER1_type 17 65 -124 449 290 14 28 chr2 164592774 164592919 -88663664 - MIR SINE MIR -13 249 107 815 321 53 56 chr2 164593882 164594349 -88662234 - L2 LINE L2 0 3272 2807 344 296 236 7 chr2 164594706 164595139 -88661444 - L2 LINE L2 -1054 2260 1729 452 205 8 90 chr2 164596999 164597121 -88659462 - L2 LINE L2 -6 3307 3196 527 216 40 40 chr2 164597263 164597411 -88659172 + MER5B DNA MER1_type 31 178 0 984 181 22 0 chr2 164597422 164597604 -88658979 - MER5A DNA MER1_type -1 188 3 388 159 115 26 chr2 164598483 164598596 -88657987 + MER97c DNA MER1_type? 56 178 -912 213 396 10 0 chr2 164598615 164598716 -88657867 + L2 LINE L2 311 412 -2902 249 200 0 0 chr2 164599046 164599086 -88657497 - MER91 DNA MER1_type -24 116 77 284 333 0 30 chr2 164599264 164599399 -88657184 + L2 LINE L2 1713 1843 -1471 465 347 76 42 chr2 164599900 164600376 -88656207 + L2 LINE L2 1588 2079 -1235 1966 157 24 21 chr2 164601155 164601797 -88654786 + L1P4 LINE L1 4908 5550 -616 351 208 31 0 chr2 164601887 164601983 -88654600 + MLT1K LTR MaLR 485 583 -5 447 247 25 32 chr2 164602146 164602304 -88654279 + MER103 DNA DNA 8 164 -2 359 299 75 34 chr2 164602404 164602551 -88654032 + L2 LINE L2 3102 3254 -18 380 326 105 23 chr2 164606121 164606293 -88650290 + MER5A DNA MER1_type 3 188 -1 1908 193 35 35 chr2 164607692 164608127 -88648456 - MER63B DNA MER1_type 0 436 2 378 313 106 14 chr2 164608635 164608843 -88647740 + L3b LINE CR1 1122 1348 -235 228 125 0 69 chr2 164609517 164609589 -88646994 + (TTAA)n Simple_repeat Simple_repeat 4 70 0 198 386 34 0 chr2 164609632 164609720 -88646863 + L2 LINE L2 2792 2882 -432 261 346 0 0 chr2 164609905 164609983 -88646600 + L2 LINE L2 3134 3211 -61 2108 128 0 7 chr2 164610887 164611192 -88645391 - AluSx SINE Alu -9 303 1 230 179 18 36 chr2 164611700 164611756 -88644827 + L3 LINE CR1 812 866 -711 364 269 94 65 chr2 164611788 164612043 -88644540 - L1MC4 LINE L1 -355 7687 7331 778 246 133 0 chr2 164612044 164612239 -88644344 + MER58A DNA MER1_type 1 221 -3 583 268 78 12 chr2 164612253 164612751 -88643832 - L1MC4 LINE L1 -547 7495 6733 304 255 175 65 chr2 164612788 164613046 -88643537 - L1MC4a LINE L1 -1211 6597 6294 1767 191 0 6 chr2 164613046 164613360 -88643223 - AluJb SINE Alu 0 312 1 304 255 175 65 chr2 164613360 164613426 -88643157 - L1MC4a LINE L1 -1514 6294 6237 620 274 50 44 chr2 164613433 164613750 -88642833 + L1MC4 LINE L1 7694 8012 -30 1318 181 46 23 chr2 164614182 164614486 -88642097 - MER58B DNA MER1_type -2 339 29 264 309 113 98 chr2 164615201 164615528 -88641055 + L3 LINE CR1 1214 1545 -32 320 346 128 58 chr2 164615724 164615912 -88640671 - L2 LINE L2 0 3272 3072 1273 274 60 16 chr2 164615912 164616368 -88640215 + MLT1G LTR MaLR 1 504 -91 558 319 195 8 chr2 164616441 164617137 -88639446 - L2 LINE L2 -257 3056 2230 281 309 12 0 chr2 164617207 164617288 -88639295 - MIR SINE MIR -147 115 34 472 366 33 19 chr2 164617304 164617670 -88638913 + HERVL LTR ERVL 2959 3329 -2325 424 316 8 0 chr2 164617676 164617809 -88638774 - MIR SINE MIR -1 261 128 233 200 20 0 chr2 164618245 164618295 -88638288 + L2 LINE L2 3263 3313 0 253 253 23 0 chr2 164618296 164618383 -88638200 + HERVL LTR ERVL 3858 3946 -1818 307 262 94 58 chr2 164618448 164618639 -88637944 + HERVL LTR ERVL 4063 4260 -1504 231 77 39 77 chr2 164619325 164619377 -88637206 + (TTTAA)n Simple_repeat Simple_repeat 5 54 0 222 37 0 0 chr2 164620189 164620216 -88636367 + (TC)n Simple_repeat Simple_repeat 1 27 0 * 351 0 0 0 chr2 164620215 164620254 -88636329 + (CA)n Simple_repeat Simple_repeat 1 39 0 191 35 0 35 chr2 164620857 164620886 -88635697 + (TTAGG)n Simple_repeat Simple_repeat 3 30 0 285 320 0 0 chr2 164620940 164621015 -88635568 + (TATATG)n Simple_repeat Simple_repeat 4 78 0 336 250 215 12 chr2 164622117 164622289 -88634294 - MIR SINE MIR -9 253 47 416 278 61 22 chr2 164623138 164623318 -88633265 - MLT1E2-int LTR MaLR -493 878 692 843 227 27 47 chr2 164623518 164624016 -88632567 - MLT1E2-int LTR MaLR -766 605 1 1474 226 106 31 chr2 164624016 164624471 -88632112 - MLT1E2 LTR MaLR 0 626 138 192 77 0 0 chr2 164626240 164626266 -88630317 + (CA)n Simple_repeat Simple_repeat 2 27 0 262 232 11 11 chr2 164626829 164626924 -88629659 + L1ME3A LINE L1 5191 5285 -861 251 302 63 19 chr2 164626933 164627092 -88629491 + L1ME3A LINE L1 5317 5482 -639 363 293 113 39 chr2 164627122 164627338 -88629245 + L1ME3A LINE L1 5584 5819 -351 2298 94 3 0 chr2 164627338 164627626 -88628957 + AluSx SINE Alu 1 289 -23 363 293 113 39 chr2 164627626 164627638 -88628945 + L1ME3A LINE L1 5819 5829 -341 1496 40 0 0 chr2 164627673 164627849 -88628734 - L1PA8 LINE L1 -8 6164 5989 37 39 0 0 chr2 164628167 164628218 -88628365 + AT_rich Low_complexity Low_complexity 1 51 0 212 261 23 45 chr2 164630528 164630616 -88625967 + CT-rich Low_complexity Low_complexity 2 87 0 679 284 80 43 chr2 164631164 164631650 -88624933 + L1ME4a LINE L1 5517 6020 -101 269 356 132 12 chr2 164632265 164632689 -88623894 + L2 LINE L2 1894 2368 -946 215 222 19 56 chr2 164633360 164633414 -88623169 + L2 LINE L2 3213 3264 -8 377 146 21 31 chr2 164633442 164633538 -88623045 + L1MC5 LINE L1 7134 7228 -733 941 210 89 99 chr2 164633613 164634251 -88622332 + L1MC5 LINE L1 7226 7857 -104 213 39 0 0 chr2 164634871 164634897 -88621686 + (GAAAA)n Simple_repeat Simple_repeat 4 29 0 29 28 0 0 chr2 164636241 164636277 -88620306 + AT_rich Low_complexity Low_complexity 1 36 0 691 330 56 35 chr2 164636495 164636783 -88619800 + L2 LINE L2 2979 3272 0 279 227 30 0 chr2 164637749 164637815 -88618768 + MIR SINE MIR 81 148 -60 341 198 170 9 chr2 164637816 164637922 -88618661 - MER112 DNA MER1_type 0 260 138 290 296 0 0 chr2 164637964 164638035 -88618548 - MER112 DNA MER1_type -187 73 3 418 335 66 6 chr2 164638159 164638326 -88618257 + MIR SINE MIR 3 179 -83 463 334 71 96 chr2 164638336 164639211 -88617372 + L2 LINE L2 2430 3268 -4 476 313 40 27 chr2 164639829 164639979 -88616604 + L2 LINE L2 3121 3272 0 8040 163 21 11 chr2 164639998 164642261 -88614322 + L1PA14 LINE L1 3865 6133 -28 1946 117 73 31 chr2 164642261 164642619 -88613964 - THE1C LTR MaLR 0 375 3 8040 163 21 11 chr2 164642619 164642639 -88613944 + L1PA14 LINE L1 6133 6151 -10 31 58 0 0 chr2 164643128 164643180 -88613403 + AT_rich Low_complexity Low_complexity 1 52 0 29 47 0 0 chr2 164643648 164643691 -88612892 + AT_rich Low_complexity Low_complexity 1 43 0 638 325 135 18 chr2 164645479 164645922 -88610661 + L2 LINE L2 2263 2757 -557 587 212 15 135 chr2 164645932 164646191 -88610392 - MER102b DNA MER1_type 0 341 114 2398 96 11 14 chr2 164646239 164646604 -88609979 - L1PB1 LINE L1 -4 6147 5784 210 37 0 0 chr2 164646604 164646631 -88609952 + (TG)n Simple_repeat Simple_repeat 2 28 0 239 259 0 0 chr2 164646639 164646724 -88609859 - L1MC4 LINE L1 -1339 6703 6619 * 243 245 21 21 chr2 164646654 164646748 -88609835 + L1MC4 LINE L1 6615 6708 -1334 251 338 83 59 chr2 164646879 164647169 -88609414 + L2 LINE L2 2806 3102 -170 182 371 9 29 chr2 164647234 164647339 -88609244 + L2 LINE L2 3179 3281 -32 2140 194 38 6 chr2 164647546 164648015 -88608568 - L1ME1 LINE L1 -203 5963 5480 4100 164 66 14 chr2 164648203 164649098 -88607485 - L1MA9 LINE L1 -1 6311 5371 2042 205 82 29 chr2 164651037 164651558 -88605025 + MER44D DNA MER2_type 1 604 -1 713 152 0 0 chr2 164652618 164652743 -88603840 + L1MA7 LINE L1 6162 6286 -5 435 230 23 11 chr2 164653922 164654009 -88602574 + MER5A DNA MER1_type 4 91 -98 1142 271 49 3 chr2 164654093 164654459 -88602124 + MER20B DNA MER1_type 398 780 -3 443 327 19 43 chr2 164654465 164654676 -88601907 - L2 LINE L2 -556 2758 2553 307 286 91 31 chr2 164654931 164655102 -88601481 + MIR SINE MIR 33 212 -50 2224 106 0 10 chr2 164655918 164656221 -88600362 + AluSx SINE Alu 10 309 -3 591 68 0 0 chr2 164656241 164656348 -88600235 + AluSg/x SINE Alu 206 312 0 249 246 174 0 chr2 164656762 164656831 -88599752 - MIR3 SINE MIR -9 199 119 204 181 0 169 chr2 164656918 164657001 -88599582 + MER91B DNA MER1_type 10 78 -112 521 304 26 60 chr2 164657232 164657342 -88599241 - MIR SINE MIR 0 262 150 2243 67 0 0 chr2 164657342 164657610 -88598973 - AluY SINE Alu -7 304 37 521 304 26 60 chr2 164657610 164657765 -88598818 - MIR SINE MIR -112 150 6 39346 48 6 2 chr2 164657889 164663085 -88593498 + L1P LINE L1 4 5221 -925 204 244 6 67 chr2 164663134 164663298 -88593285 + A-rich Low_complexity Low_complexity 6 159 0 320 212 10 20 chr2 164663584 164663683 -88592900 - L1ME3A LINE L1 -214 5939 5842 1212 280 56 74 chr2 164663694 164664395 -88592188 - L1ME3A LINE L1 -387 5766 5054 2761 82 0 0 chr2 164664395 164664750 -88591833 + THE1A LTR MaLR 1 355 0 10964 102 33 1 chr2 164664750 164666281 -88590302 + THE1A-int LTR MaLR 1 1580 0 2657 91 6 0 chr2 164666281 164666634 -88589949 + THE1A LTR MaLR 1 355 0 1212 280 56 74 chr2 164666634 164667209 -88589374 - L1ME3A LINE L1 -1097 5056 4463 376 73 18 0 chr2 164667209 164667264 -88589319 - MER41A LTR ERV1 -101 453 398 1212 280 56 74 chr2 164667264 164667687 -88588896 - L1ME3A LINE L1 -1690 4463 4034 2470 50 0 20 chr2 164667706 164668007 -88588576 + AluY SINE Alu 1 295 -16 219 114 0 0 chr2 164668041 164668076 -88588507 + (TATG)n Simple_repeat Simple_repeat 2 36 0 384 303 45 70 chr2 164668084 164668235 -88588348 - L1ME3A LINE L1 -5002 1117 964 2299 123 0 0 chr2 164668235 164668536 -88588047 - AluSq SINE Alu -12 301 1 384 303 45 70 chr2 164668536 164668714 -88587869 - L1ME3A LINE L1 -5155 964 796 28 0 0 0 chr2 164669157 164669185 -88587398 + AT_rich Low_complexity Low_complexity 1 28 0 19650 34 2 0 chr2 164669253 164672417 -88584166 - L1PA3 LINE L1 0 6155 2985 321 227 0 0 chr2 164672789 164672864 -88583719 + MER116 DNA Mariner 5 79 -1 378 244 89 8 chr2 164673202 164673325 -88583258 + MLT1J LTR MaLR 8 140 -371 680 141 8 0 chr2 164673376 164673497 -88583086 + CT-rich Low_complexity Low_complexity 1 122 0 1976 225 42 94 chr2 164673497 164674001 -88582582 - L1ME1 LINE L1 -140 6095 5643 1954 136 7 0 chr2 164674001 164674287 -88582296 + AluSx SINE Alu 17 304 -8 1976 225 42 94 chr2 164674287 164674551 -88582032 - L1ME1 LINE L1 -592 5643 5367 * 6711 33 0 0 chr2 164674550 164675388 -88581195 + L1P LINE L1 3372 4209 -1937 1436 255 44 8 chr2 164675385 164675864 -88580719 - L1ME1 LINE L1 -847 5368 4873 * 487 267 30 35 chr2 164677037 164677239 -88579344 - LTR67 LTR ERVL -7 550 350 1024 276 43 58 chr2 164677339 164677355 -88579228 - L1ME1 LINE L1 -4947 1449 1434 2540 112 11 8 chr2 164677355 164677729 -88578854 - THE1C LTR MaLR 0 375 1 1024 276 43 58 chr2 164677729 164678472 -88578111 - L1ME1 LINE L1 -4962 1434 701 415 356 45 77 chr2 164678614 164679041 -88577542 - L1ME1 LINE L1 -5831 565 153 258 287 65 28 chr2 164679045 164679153 -88577430 - L1ME1 LINE L1 -5956 249 138 501 321 39 101 chr2 164679713 164680303 -88576280 - L2 LINE L2 0 3272 2719 1784 167 0 33 chr2 164680303 164680602 -88575981 - AluJo SINE Alu -23 289 1 501 321 39 101 chr2 164680602 164680711 -88575872 - L2 LINE L2 -553 2719 2605 2206 102 10 0 chr2 164681076 164681369 -88575214 + AluSc SINE Alu 1 296 -13 350 235 51 20 chr2 164681963 164682061 -88574522 + MIR3 SINE MIR 81 181 -27 184 302 0 0 chr2 164682481 164682524 -88574059 + L2 LINE L2 3210 3252 -20 1040 260 20 57 chr2 164683213 164683655 -88572928 + L1MCc LINE L1 24 449 -5974 581 274 77 19 chr2 164683857 164684039 -88572544 + L1MCc LINE L1 799 996 -5427 1781 172 6 32 chr2 164684039 164684353 -88572230 + AluJo SINE Alu 1 306 -6 581 274 77 19 chr2 164684353 164684378 -88572205 + L1MCc LINE L1 996 1018 -5405 1730 171 49 8 chr2 164684445 164684814 -88571769 + L1ME1 LINE L1 5750 6133 -33 1904 93 24 111 chr2 164684814 164684950 -88571633 + AluYb8 SINE Alu 1 147 -171 3885 37 0 0 chr2 164684950 164685411 -88571172 + L1PA5 LINE L1 5691 6151 -3 1904 93 24 111 chr2 164685411 164685606 -88570977 + AluYb8 SINE Alu 147 303 -15 2086 215 92 20 chr2 164685661 164686427 -88570156 + L1ME3 LINE L1 5144 5972 -190 255 390 29 17 chr2 164686594 164686652 -88569931 + L2 LINE L2 2949 3005 -308 1186 186 18 22 chr2 164686652 164686927 -88569656 - L1MA6 LINE L1 -3 6297 6024 255 390 29 17 chr2 164686927 164687040 -88569543 + L2 LINE L2 3005 3122 -191 40439 36 23 1 chr2 164687135 164693143 -88563440 + L1PA2 LINE L1 11 6155 0 201 257 300 0 chr2 164693198 164693268 -88563315 + L2 LINE L2 3210 3300 -13 243 202 111 81 chr2 164694118 164694217 -88562366 + MIR SINE MIR 161 262 0 35 63 0 0 chr2 164694563 164694626 -88561957 + AT_rich Low_complexity Low_complexity 1 63 0 29785 109 16 60 chr2 164695290 164701259 -88555324 + L1P3 LINE L1 12 5699 -455 357 269 19 19 chr2 164701639 164701795 -88554788 + L1ME3 LINE L1 5926 6081 -81 259 156 0 0 chr2 164701967 164702012 -88554571 + MER116 DNA Mariner 4 48 -32 334 173 27 0 chr2 164703064 164703139 -88553444 + MER116 DNA Mariner 4 80 0 256 298 65 48 chr2 164703619 164703743 -88552840 + MIR3 SINE MIR 44 169 -39 4742 77 7 11 chr2 164703749 164704362 -88552221 - SVA Other Other 0 1386 777 5159 107 34 22 chr2 164704714 164705687 -88550896 - SVA Other Other -518 868 1 2040 78 7 7 chr2 164706497 164706768 -88549815 + AluSc SINE Alu 39 309 0 887 254 50 61 chr2 164709785 164710242 -88546341 + LTR16A1 LTR ERVL 6 457 0 1879 151 14 0 chr2 164712938 164713222 -88543361 - AluJo SINE Alu -19 293 6 338 242 101 97 chr2 164713415 164713663 -88542920 + MLT1L LTR MaLR 95 343 -272 263 235 71 12 chr2 164713751 164713836 -88542747 + MLT1L LTR MaLR 508 597 -18 216 143 0 0 chr2 164714131 164714166 -88542417 - L3 LINE CR1 -203 1374 1340 726 255 32 19 chr2 164716250 164716564 -88540019 + L1ME4a LINE L1 5532 5849 -272 375 265 37 22 chr2 164716697 164716833 -88539750 + L1ME4a LINE L1 5981 6118 -3 28 61 0 0 chr2 164717036 164717085 -88539498 + AT_rich Low_complexity Low_complexity 1 49 0 1211 144 65 20 chr2 164717407 164717699 -88538884 + MER33 DNA MER1_type 1 305 -19 287 267 74 52 chr2 164717797 164717932 -88538651 + MIR3 SINE MIR 4 141 -67 1903 141 43 10 chr2 164718128 164718427 -88538156 - AluSx SINE Alu -3 309 1 370 279 91 50 chr2 164718549 164718890 -88537693 - L1ME4a LINE L1 -224 6177 5823 3933 241 134 36 chr2 164719048 164720696 -88535887 + L2 LINE L2 1432 3234 -79 477 313 67 41 chr2 164721127 164721514 -88535069 - L1MC4a LINE L1 -1915 5893 5497 445 295 108 36 chr2 164721919 164722224 -88534359 - L1MC4a LINE L1 -1540 4606 4280 28593 42 5 0 chr2 164722234 164726714 -88529869 - L1PA4 LINE L1 0 6155 1655 8546 82 16 2 chr2 164726688 164727972 -88528611 - L1P LINE L1 -2438 3708 2406 * 866 229 50 16 chr2 164727971 164728229 -88528354 - L1ME4a LINE L1 -1315 5111 4845 * 2247 182 34 5 chr2 164728220 164728666 -88527917 - L1ME4a LINE L1 -5956 470 12 21 0 0 0 chr2 164728731 164728752 -88527831 + AT_rich Low_complexity Low_complexity 1 21 0 33 25 0 0 chr2 164728997 164729037 -88527546 + AT_rich Low_complexity Low_complexity 1 40 0 2452 104 28 0 chr2 164729624 164729978 -88526605 - THE1B LTR MaLR 0 364 1 258 297 9 36 chr2 164730022 164730133 -88526450 - MLT1K LTR MaLR -373 215 108 181 302 95 16 chr2 164730985 164731048 -88525535 - L2 LINE L2 -56 3257 3190 443 276 213 36 chr2 164733787 164734275 -88522308 - L2 LINE L2 -146 3167 2577 25 51 0 0 chr2 164734322 164734361 -88522222 + AT_rich Low_complexity Low_complexity 1 39 0 2188 100 0 0 chr2 164735530 164735811 -88520772 - AluSx SINE Alu 0 312 32 911 204 0 6 chr2 164736521 164736697 -88519886 - FAM SINE Alu 0 175 1 512 286 57 26 chr2 164736795 164736987 -88519596 + MIR SINE MIR 16 213 -49 233 97 0 0 chr2 164736995 164737026 -88519557 + MADE1 DNA Mariner 4 34 -46 193 265 0 20 chr2 164737032 164737081 -88519502 + MIR SINE MIR 215 262 0 22 0 0 0 chr2 164739455 164739477 -88517106 + AT_rich Low_complexity Low_complexity 1 22 0 924 282 95 21 chr2 164739643 164740126 -88516457 + LTR33A LTR ERVL 4 522 -1 401 291 19 38 chr2 164740522 164740680 -88515903 + L2 LINE L2 3159 3313 0 394 336 50 62 chr2 164740742 164740953 -88515630 + L2 LINE L2 2499 2711 -603 737 165 0 8 chr2 164740953 164741080 -88515503 - FLAM_A SINE Alu -6 127 2 394 336 50 62 chr2 164741080 164741350 -88515233 + L2 LINE L2 2711 2974 -340 447 278 120 0 chr2 164741523 164741656 -88514927 + L2 LINE L2 3165 3313 0 344 274 0 0 chr2 164743990 164744085 -88512498 + L1ME3 LINE L1 6067 6161 -1 1167 276 41 3 chr2 164744112 164744431 -88512152 + L1MC/D LINE L1 5427 5757 -2051 1486 221 101 32 chr2 164744434 164745030 -88511553 + L1MC5 LINE L1 7292 7928 -33 25 51 0 0 chr2 164745414 164745453 -88511130 + AT_rich Low_complexity Low_complexity 1 39 0 392 308 0 43 chr2 164746796 164746981 -88509602 + A-rich Low_complexity Low_complexity 2 178 0 2933 53 0 0 chr2 164747325 164747685 -88508898 + L1PA7 LINE L1 5790 6149 -5 23 54 0 0 chr2 164747969 164748006 -88508577 + AT_rich Low_complexity Low_complexity 1 37 0 818 302 87 9 chr2 164748325 164748659 -88507924 + LTR16A LTR ERVL 3 362 -88 300 297 109 29 chr2 164749779 164749908 -88506675 - MIR3 SINE MIR -21 187 50 622 207 125 85 chr2 164749917 164750212 -88506371 + MER46C DNA MER2_type 32 338 0 5525 96 17 135 chr2 164751004 164752137 -88504446 - L1P LINE L1 -1454 4692 3694 914 152 37 18 chr2 164752137 164752301 -88504282 + L1PA10 LINE L1 5983 6149 -19 180 0 0 0 chr2 164752301 164752321 -88504262 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 23 54 0 0 chr2 164752362 164752399 -88504184 + AT_rich Low_complexity Low_complexity 1 37 0 255 339 77 63 chr2 164754837 164754927 -88501656 + L2 LINE L2 2828 2915 -357 1817 165 73 75 chr2 164754927 164755431 -88501152 + MLT1D LTR MaLR 1 503 -2 255 339 77 63 chr2 164755431 164755626 -88500957 + L2 LINE L2 2915 3117 -155 510 352 40 26 chr2 164755721 164755994 -88500589 + L2 LINE L2 3031 3307 -6 228 188 39 13 chr2 164756615 164756693 -88499890 + L1MC/D LINE L1 5853 5932 -427 270 219 0 0 chr2 164756867 164756931 -88499652 + (TA)n Simple_repeat Simple_repeat 1 64 0 1097 180 10 10 chr2 164756976 164757182 -88499401 + MER2 DNA MER2_type 1 206 -139 329 258 0 0 chr2 164757215 164757281 -88499302 + MER2 DNA MER2_type 280 345 0 238 236 83 14 chr2 164757769 164757841 -88498742 + MLT1L LTR MaLR 3 79 -536 581 287 93 48 chr2 164757882 164758237 -88498346 + MLT1J LTR MaLR 137 507 -4 219 174 109 0 chr2 164758725 164758771 -88497812 + L2 LINE L2 3261 3311 -2 578 261 140 57 chr2 164759647 164759802 -88496781 + L1ME LINE L1 5398 5539 -582 13982 167 29 5 chr2 164759802 164762163 -88494420 + Tigger1 DNA MER2_type 1 2418 0 677 191 24 0 chr2 164762171 164762297 -88494286 - FLAM_A SINE Alu -4 129 1 578 261 140 57 chr2 164762297 164762503 -88494080 + L1ME LINE L1 5545 5799 -322 260 273 0 91 chr2 164762634 164762722 -88493861 + MIR SINE MIR 28 107 -155 2160 253 48 28 chr2 164762731 164763906 -88492677 + L1ME4a LINE L1 4533 5743 -419 733 208 44 6 chr2 164763906 164764065 -88492518 + AluJo SINE Alu 86 250 -62 1433 213 0 85 chr2 164764096 164764495 -88492088 + MLT1A1 LTR MaLR 1 365 0 1857 104 27 53 chr2 164764841 164765140 -88491443 + AluSg SINE Alu 1 291 -19 2002 126 3 55 chr2 164765226 164765535 -88491048 + AluSx SINE Alu 1 293 -19 227 273 117 0 chr2 164765607 164765761 -88490822 + L1ME4a LINE L1 5911 6082 -39 264 153 0 34 chr2 164765802 164765861 -88490722 - L1MC4 LINE L1 0 8042 7986 2402 203 84 22 chr2 164765862 164766483 -88490100 - L1MC4 LINE L1 -140 7902 7244 686 137 72 43 chr2 164766493 164766534 -88490049 - L1MC4 LINE L1 -962 7080 7042 2089 149 120 3 chr2 164766534 164766917 -88489666 + MSTA LTR MaLR 1 428 0 686 137 72 43 chr2 164766917 164767014 -88489569 - L1MC4 LINE L1 -1000 7042 6938 465 220 71 23 chr2 164767015 164767145 -88489438 - MLT1E3 LTR MaLR -46 571 442 1109 226 153 31 chr2 164767368 164767834 -88488749 - MLT1E3 LTR MaLR -168 458 9 229 208 57 0 chr2 164767835 164767888 -88488695 + MIR SINE MIR 196 251 -11 293 250 212 0 chr2 164767987 164768119 -88488464 + L1ME LINE L1 5540 5699 -422 493 292 66 0 chr2 164768619 164768756 -88487827 - MIR SINE MIR -83 179 34 1533 221 155 2 chr2 164769477 164769915 -88486668 - L1MC4 LINE L1 -1094 6948 6444 524 232 110 89 chr2 164770816 164770927 -88485656 + MIR SINE MIR 10 117 -145 2213 118 0 0 chr2 164770927 164771231 -88485352 - AluSq SINE Alu -3 310 7 524 232 110 89 chr2 164771231 164771365 -88485218 + MIR SINE MIR 117 260 -2 460 294 8 8 chr2 164773486 164773612 -88482971 - L2 LINE L2 0 3313 3188 23 33 0 0 chr2 164774007 164774037 -88482546 + AT_rich Low_complexity Low_complexity 1 30 0 419 264 45 9 chr2 164774623 164774733 -88481850 - L2 LINE L2 0 3272 3159 1208 146 87 14 chr2 164774837 164775056 -88481527 + MER46A DNA MER2_type 1 235 -1 800 252 24 24 chr2 164775347 164775597 -88480986 - Charlie7 DNA MER1_type -2095 517 268 337 312 142 25 chr2 164778129 164778363 -88478220 + MIR SINE MIR 3 262 0 473 286 57 86 chr2 164778553 164778889 -88477694 + Charlie8 DNA MER1_type 2 327 -2090 448 294 89 14 chr2 164778981 164779164 -88477419 + MIR SINE MIR 27 203 -59 264 238 0 0 chr2 164779235 164779319 -88477264 + (CTA)n Simple_repeat Simple_repeat 2 85 0 7785 72 24 4 chr2 164779673 164784148 -88472435 + L1PA6 LINE L1 1591 6154 0 209 196 22 0 chr2 164785795 164785841 -88470742 + (CA)n Simple_repeat Simple_repeat 1 47 0 216 111 0 0 chr2 164786130 164786166 -88470417 + (CA)n Simple_repeat Simple_repeat 2 37 0 692 261 28 37 chr2 164786379 164786597 -88469986 + MIR SINE MIR 46 261 -1 269 254 0 0 chr2 164786613 164786676 -88469907 + MER94 DNA DNA 2 64 -70 27 29 0 0 chr2 164787116 164787150 -88469433 + AT_rich Low_complexity Low_complexity 1 34 0 312 272 158 9 chr2 164787490 164787718 -88468865 + L1MC4a LINE L1 5914 6175 -1633 234 356 22 22 chr2 164788432 164788567 -88468016 + 7SK RNA RNA 1 135 -58 229 341 152 15 chr2 164788758 164788890 -88467693 + MER91A DNA MER1_type 38 187 -9 1938 176 0 0 chr2 164789053 164789365 -88467218 - AluJb SINE Alu 0 312 1 211 236 14 28 chr2 164789445 164789517 -88467066 + CT-rich Low_complexity Low_complexity 2 72 0 3320 140 91 63 chr2 164790527 164791508 -88465075 - L1MA9 LINE L1 -1 6311 5266 22 35 0 0 chr2 164791516 164791545 -88465038 + AT_rich Low_complexity Low_complexity 1 29 0 5010 89 0 0 chr2 164791563 164792204 -88464379 + THE1B-int LTR MaLR 940 1580 0 1957 115 80 37 chr2 164792204 164792553 -88464030 + THE1B LTR MaLR 1 364 0 2826 239 81 17 chr2 164792570 164794330 -88462253 - L1 LINE L1 -3773 3394 1562 625 291 91 51 chr2 164794402 164794853 -88461730 - L1 LINE L1 -6699 469 1 218 343 0 0 chr2 164794925 164794998 -88461585 + MER5A DNA MER1_type 60 132 -57 387 0 0 0 chr2 164795269 164795312 -88461271 + (TTA)n Simple_repeat Simple_repeat 3 45 0 1067 32 0 0 chr2 164795312 164795435 -88461148 - L1PA3 LINE L1 -18 6137 6015 214 352 38 38 chr2 164795910 164796015 -88460568 - L2 LINE L2 -8 3264 3160 717 224 107 15 chr2 164796074 164796279 -88460304 - MER58A DNA MER1_type 0 224 1 595 73 52 10 chr2 164796939 164797035 -88459548 + L1PA4 LINE L1 6053 6152 -3 459 279 8 115 chr2 164797035 164797279 -88459304 - MIR SINE MIR -27 235 18 2035 139 142 18 chr2 164797522 164797903 -88458680 - MSTA LTR MaLR 0 428 1 2288 124 30 3 chr2 164797903 164798267 -88458316 - MSTA-int LTR MaLR 0 1651 1278 * 5274 168 68 10 chr2 164798256 164799265 -88457318 - MSTA-int LTR MaLR -510 1070 3 2172 138 138 5 chr2 164799267 164799645 -88456938 - MSTA LTR MaLR 0 428 1 1392 255 54 34 chr2 164799752 164800199 -88456384 + LTR16B LTR ERVL 1 456 -8 23 78 0 0 chr2 164800434 164800485 -88456098 + AT_rich Low_complexity Low_complexity 1 51 0 566 294 12 12 chr2 164800591 164800751 -88455832 + MIR3 SINE MIR 48 207 -1 742 286 156 31 chr2 164800914 164801305 -88455278 + L2 LINE L2 2874 3313 0 544 266 108 0 chr2 164801930 164802088 -88454495 + MIR SINE MIR 58 232 -30 29230 56 10 2 chr2 164802574 164807170 -88449413 + L1PA5 LINE L1 1521 6152 -2 22 0 0 0 chr2 164808059 164808081 -88448502 + AT_rich Low_complexity Low_complexity 1 22 0 26 30 0 0 chr2 164809503 164809536 -88447047 + AT_rich Low_complexity Low_complexity 1 33 0 1175 314 79 80 chr2 164809880 164810032 -88446551 - L2 LINE L2 -221 3051 2900 1713 196 3 3 chr2 164810032 164810323 -88446260 + AluJb SINE Alu 3 293 -19 1175 314 79 80 chr2 164810323 164811015 -88445568 - L2 LINE L2 -372 2900 2209 5907 50 0 0 chr2 164811015 164811741 -88444842 + L1PA5 LINE L1 5429 6154 0 1175 314 79 80 chr2 164811741 164811803 -88444780 - L2 LINE L2 -1063 2209 2148 396 0 0 0 chr2 164811803 164811847 -88444736 + (TAGA)n Simple_repeat Simple_repeat 4 47 0 1175 314 79 80 chr2 164811847 164812030 -88444553 - L2 LINE L2 -1124 2148 1965 953 335 64 27 chr2 164812118 164812895 -88443688 + L1ME2 LINE L1 35 840 -5556 1113 176 70 4 chr2 164812944 164813188 -88443395 + L1MA4 LINE L1 6030 6289 -11 902 252 55 86 chr2 164813201 164814098 -88442485 + L1ME2 LINE L1 862 1732 -4664 1711 158 11 7 chr2 164814098 164814370 -88442213 + AluSx SINE Alu 1 273 -39 902 252 55 86 chr2 164814370 164814395 -88442188 + L1ME2 LINE L1 1732 1756 -4640 740 252 106 19 chr2 164814418 164814882 -88441701 + L1ME2 LINE L1 1906 2409 -3987 669 314 27 6 chr2 164814896 164815234 -88441349 + L1ME2 LINE L1 3417 3761 -2454 812 106 0 0 chr2 164815236 164815340 -88441243 + AluSq/x SINE Alu 3 106 -207 1313 236 0 10 chr2 164815398 164815534 -88441049 + AluJb SINE Alu 1 137 -175 180 0 0 0 chr2 164815534 164815554 -88441029 + (TA)n Simple_repeat Simple_repeat 2 21 0 1313 236 0 10 chr2 164815554 164815705 -88440878 + AluJb SINE Alu 137 285 -27 637 211 67 9 chr2 164815713 164815936 -88440647 + L1ME2 LINE L1 5162 5397 -818 40888 66 4 2 chr2 164815944 164822080 -88434503 + L1PA5 LINE L1 1 6153 -1 1807 182 68 68 chr2 164822140 164822316 -88434267 + L1ME2 LINE L1 5386 5561 -672 1483 190 7 34 chr2 164822316 164822611 -88433972 - AluJo SINE Alu -25 287 1 1807 182 68 68 chr2 164822611 164822908 -88433675 + L1ME2 LINE L1 5561 5862 -371 1579 135 122 3 chr2 164822908 164823211 -88433372 - MER44D DNA MER2_type 0 609 1 1807 182 68 68 chr2 164823211 164823252 -88433331 + L1ME2 LINE L1 5861 5901 -332 940 193 18 6 chr2 164823342 164823513 -88433070 + FAM SINE Alu 1 173 -2 677 231 156 0 chr2 164825201 164825387 -88431196 - MIR SINE MIR -21 241 27 243 0 0 0 chr2 164825477 164825504 -88431079 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1522 162 12 96 chr2 164825637 164825971 -88430612 + AluJb SINE Alu 4 309 -3 238 266 31 55 chr2 164826196 164826324 -88430259 - MIR SINE MIR -64 144 20 189 233 23 0 chr2 164826778 164826821 -88429762 + MIR3 SINE MIR 159 202 -6 1990 135 3 16 chr2 164826942 164827253 -88429330 + AluJo SINE Alu 2 308 -4 187 254 42 28 chr2 164827564 164827635 -88428948 - MIR SINE MIR -62 146 75 24 32 0 0 chr2 164828202 164828233 -88428350 + AT_rich Low_complexity Low_complexity 1 31 0 994 247 102 33 chr2 164828299 164828508 -88428075 - Charlie7 DNA MER1_type -265 2347 2154 1816 151 13 23 chr2 164828508 164828807 -88427776 + AluJo SINE Alu 1 296 -16 994 247 102 33 chr2 164828807 164829018 -88427565 - Charlie7 DNA MER1_type -458 2154 1898 22 35 0 0 chr2 164829034 164829063 -88427520 + AT_rich Low_complexity Low_complexity 1 29 0 2495 234 81 30 chr2 164829065 164829597 -88426986 - L1ME1 LINE L1 -5 6397 5894 1639 205 10 0 chr2 164829597 164829904 -88426679 - 7SLRNA srpRNA srpRNA -10 310 1 2495 234 81 30 chr2 164829904 164830783 -88425800 - L1ME1 LINE L1 -508 5894 5062 1886 162 13 0 chr2 164830783 164831086 -88425497 - AluJb SINE Alu -5 307 1 2495 234 81 30 chr2 164831086 164831267 -88425316 - L1ME1 LINE L1 -1340 5062 4892 2235 116 0 0 chr2 164831267 164831568 -88425015 - AluSg SINE Alu -9 301 1 2495 234 81 30 chr2 164831568 164831845 -88424738 - L1ME1 LINE L1 -1510 4892 4314 303 165 58 184 chr2 164831845 164831893 -88424690 - 5S rRNA rRNA -31 90 60 2036 131 7 3 chr2 164831893 164832191 -88424392 - AluSx SINE Alu -13 299 1 303 165 58 184 chr2 164832191 164832245 -88424338 - 5S rRNA rRNA -61 60 1 579 257 35 5 chr2 164832246 164832448 -88424135 - L1ME1 LINE L1 -2065 4317 4110 2095 280 75 12 chr2 164832987 164833852 -88422731 - L1ME1 LINE L1 -4728 1656 737 757 209 114 101 chr2 164834468 164835003 -88421580 - MER34 LTR ERV1 0 542 1 393 299 209 31 chr2 164839236 164839557 -88417026 - L1M2 LINE L1 -5930 919 542 23 92 0 0 chr2 164839750 164839815 -88416768 + GC_rich Low_complexity Low_complexity 1 65 0 293 0 0 26 chr2 164842232 164842270 -88414313 + (CA)n Simple_repeat Simple_repeat 1 37 0 946 230 19 0 chr2 164845159 164845368 -88411215 + MIR SINE MIR 37 249 -13 639 257 76 26 chr2 164845960 164846140 -88410443 + MIR3 SINE MIR 11 201 -7 2143 110 0 27 chr2 164848857 164849156 -88407427 + AluSx SINE Alu 1 291 -21 801 166 13 14 chr2 164849641 164849855 -88406728 - L1MD1 LINE L1 -66 6176 5929 906 179 13 0 chr2 164849856 164850007 -88406576 + AluJb SINE Alu 145 297 -15 1759 197 0 3 chr2 164850010 164850314 -88406269 + AluJo SINE Alu 5 307 -5 1233 204 95 0 chr2 164850314 164850608 -88405975 - L1MD1 LINE L1 -312 5930 5609 21 57 0 0 chr2 164850924 164850959 -88405624 + AT_rich Low_complexity Low_complexity 1 35 0 1944 148 6 28 chr2 164851204 164851521 -88405062 - AluJo SINE Alu -2 310 1 2306 113 0 0 chr2 164851530 164851832 -88404751 - AluSx SINE Alu -10 302 1 278 316 77 93 chr2 164852326 164852649 -88403934 + L2 LINE L2 2955 3272 0 253 262 119 38 chr2 164852968 164853178 -88403405 + L1MCb LINE L1 36 262 -5783 1058 191 59 0 chr2 164854469 164854741 -88401842 + L1MA8 LINE L1 6003 6290 -1 2311 82 0 19 chr2 164854770 164855086 -88401497 + AluY SINE Alu 1 310 -1 6013 98 22 0 chr2 164855303 164856242 -88400341 + L1PA14 LINE L1 5187 6144 -17 21 0 0 0 chr2 164856934 164856955 -88399628 + AT_rich Low_complexity Low_complexity 1 21 0 364 314 109 16 chr2 164857244 164857566 -88399017 - L1MCc LINE L1 -6000 423 72 367 319 44 52 chr2 164857703 164857838 -88398745 + L2 LINE L2 3116 3249 -23 589 268 158 4 chr2 164858094 164858322 -88398261 + LTR16C LTR ERVL 229 491 0 1714 185 14 3 chr2 164858776 164859073 -88397510 - AluJo SINE Alu -12 300 1 307 224 54 48 chr2 164859159 164859306 -88397277 - L1ME4a LINE L1 0 6121 5974 257 396 0 0 chr2 164859617 164859713 -88396870 - MIR3 SINE MIR -6 202 107 948 200 0 6 chr2 164860144 164860309 -88396274 + FAM SINE Alu 4 167 -8 53 34 0 22 chr2 164861640 164861672 -88394911 + AT_rich Low_complexity Low_complexity 1 32 -55 1874 144 34 0 chr2 164861672 164861964 -88394619 - AluJb SINE Alu -10 302 1 53 34 0 22 chr2 164861964 164862020 -88394563 + AT_rich Low_complexity Low_complexity 32 87 0 2188 113 7 3 chr2 164862679 164862979 -88393604 - AluSq SINE Alu -12 301 1 27 62 0 0 chr2 164863080 164863128 -88393455 + AT_rich Low_complexity Low_complexity 1 48 0 1757 157 23 26 chr2 164863152 164863495 -88393088 - L1MB7 LINE L1 -19 6165 5824 885 127 0 45 chr2 164863532 164863666 -88392917 - FLAM_C SINE Alu -15 128 1 2788 132 20 10 chr2 164863666 164864175 -88392408 - L1MB7 LINE L1 -359 5825 5312 824 181 77 11 chr2 164864496 164864678 -88391905 - MER3 DNA MER1_type 0 209 16 182 125 0 25 chr2 164864732 164864772 -88391811 + (TTCC)n Simple_repeat Simple_repeat 3 41 0 682 204 0 0 chr2 164864776 164864889 -88391694 - FLAM_A SINE Alu -19 114 2 1659 192 31 0 chr2 164864997 164865283 -88391300 + AluJo SINE Alu 1 295 -17 2786 19 0 19 chr2 164866465 164866789 -88389794 - AluYb8 SINE Alu 0 318 1 680 270 69 20 chr2 164867642 164867846 -88388737 - MIR SINE MIR 0 262 49 207 347 0 14 chr2 164867976 164868048 -88388535 + L2 LINE L2 3201 3271 -1 24 67 0 0 chr2 164868433 164868478 -88388105 + AT_rich Low_complexity Low_complexity 1 45 0 246 319 31 80 chr2 164869739 164869902 -88386681 - MIR SINE MIR -56 206 52 247 177 32 0 chr2 164870217 164870279 -88386304 + GA-rich Low_complexity Low_complexity 3 66 0 183 167 56 0 chr2 164870676 164870712 -88385871 - L2 LINE L2 -9 3304 3267 374 308 20 14 chr2 164871040 164871186 -88385397 + MLT1E LTR MaLR 1 147 -446 308 236 42 0 chr2 164871415 164871487 -88385096 + MIR3 SINE MIR 89 163 -45 317 324 79 81 chr2 164873349 164873818 -88382765 - L1MB5 LINE L1 -166 6008 5541 266 256 80 25 chr2 164873839 164874038 -88382545 - L1P5 LINE L1 -690 5466 5257 1474 194 6 52 chr2 164874227 164874551 -88382032 - AluJb SINE Alu -3 309 1 29 84 0 0 chr2 164875387 164875458 -88381125 + AT_rich Low_complexity Low_complexity 1 71 0 285 272 99 25 chr2 164875460 164875622 -88380961 - HAL1 LINE L1 -56 2451 2278 374 282 80 41 chr2 164875668 164876030 -88380553 - HAL1 LINE L1 -302 2205 1830 321 281 72 29 chr2 164877169 164877308 -88379275 + MIR SINE MIR 58 202 -60 2211 107 0 3 chr2 164877379 164877677 -88378906 + AluSg SINE Alu 1 297 -13 1982 119 7 0 chr2 164877998 164878323 -88378260 + AluSx SINE Alu 3 329 0 1962 135 3 3 chr2 164878421 164878723 -88377860 - AluSx SINE Alu 0 302 1 23 33 0 0 chr2 164878724 164878754 -88377829 + AT_rich Low_complexity Low_complexity 1 30 0 363 23 0 0 chr2 164879163 164879202 -88377381 + (TG)n Simple_repeat Simple_repeat 1 83 0 363 23 0 0 chr2 164879202 164879246 -88377337 + (TG)n Simple_repeat Simple_repeat 2 45 0 356 185 217 0 chr2 164879595 164879687 -88376896 - MER21B LTR ERV1 -423 440 329 499 294 110 5 chr2 164880000 164880218 -88376365 + MIR SINE MIR 10 250 -12 782 163 31 0 chr2 164880600 164880729 -88375854 - FLAM_A SINE Alu 0 133 1 21 36 0 0 chr2 164885807 164885835 -88370748 + AT_rich Low_complexity Low_complexity 1 28 0 577 202 10 0 chr2 164886240 164886344 -88370239 - MER5A DNA MER1_type 0 189 85 207 0 0 0 chr2 164886408 164886431 -88370152 + (T)n Simple_repeat Simple_repeat 1 23 0 220 236 0 18 chr2 164886734 164886789 -88369794 + L2 LINE L2 3218 3271 -1 2410 81 0 28 chr2 164890517 164890837 -88365746 + AluSq SINE Alu 1 311 -2 2512 63 3 0 chr2 164892108 164892409 -88364174 + AluSp SINE Alu 1 302 -11 2171 113 3 0 chr2 164893547 164893839 -88362744 + AluSx SINE Alu 1 293 -19 376 295 19 19 chr2 164896615 164896720 -88359863 - L2 LINE L2 -7 3265 3161 2336 100 0 0 chr2 164897103 164897394 -88359189 + AluSx SINE Alu 3 293 -19 658 231 0 15 chr2 164897780 164897914 -88358669 + FLAM_A SINE Alu 1 132 -1 1590 200 4 0 chr2 164898216 164898486 -88358097 + AluJo SINE Alu 11 281 -31 381 282 167 6 chr2 164898608 164898764 -88357819 - MER5A DNA MER1_type 0 189 9 2289 101 7 10 chr2 164899096 164899403 -88357180 - AluSq SINE Alu -7 306 1 1502 181 14 14 chr2 164900090 164900378 -88356205 + AluJb SINE Alu 15 302 -10 536 237 109 55 chr2 164900489 164900911 -88355672 - MLT1H LTR MaLR -19 530 14 527 307 189 36 chr2 164901172 164901781 -88354802 - HAL1 LINE L1 -836 1671 970 301 323 129 39 chr2 164903031 164903186 -88353397 - L1ME3A LINE L1 -37 6133 5965 1219 274 77 14 chr2 164903230 164903799 -88352784 - L1ME3A LINE L1 -211 5959 5355 40971 32 21 1 chr2 164905060 164911092 -88345491 + L1PA2 LINE L1 1 6155 0 309 294 59 39 chr2 164911417 164911570 -88345013 - L3 LINE CR1 -13 1564 1409 503 332 207 33 chr2 164911923 164912880 -88343703 - L3 LINE CR1 -418 1159 37 246 62 0 0 chr2 164912939 164912971 -88343612 + (T)n Simple_repeat Simple_repeat 1 32 0 286 220 0 17 chr2 164914806 164914865 -88341718 - L2 LINE L2 0 3272 3215 1576 181 0 37 chr2 164917864 164918163 -88338420 - AluJo SINE Alu -24 288 1 22 0 0 0 chr2 164918164 164918186 -88338397 + AT_rich Low_complexity Low_complexity 1 22 0 566 187 194 14 chr2 164918341 164918480 -88338103 + MIR SINE MIR 78 241 -21 182 309 8 89 chr2 164919377 164919500 -88337083 + L2 LINE L2 3160 3272 0 1911 139 45 7 chr2 164920189 164920477 -88336106 + AluJb SINE Alu 2 300 -12 2380 101 0 7 chr2 164920977 164921284 -88335299 - AluSx SINE Alu -7 305 1 190 320 0 27 chr2 164922172 164922247 -88334336 - L3 LINE CR1 -900 677 605 23 33 0 0 chr2 164922864 164922894 -88333689 + AT_rich Low_complexity Low_complexity 1 30 0 21 89 0 0 chr2 164924025 164924081 -88332502 + AT_rich Low_complexity Low_complexity 1 56 0 270 193 0 0 chr2 164925213 164925270 -88331313 + (CTA)n Simple_repeat Simple_repeat 3 59 0 255 229 0 0 chr2 164925363 164925411 -88331172 - MIR SINE MIR -2 260 213 300 181 24 48 chr2 164925591 164925674 -88330909 - MER46A DNA MER2_type -43 193 113 284 182 0 0 chr2 164925676 164925731 -88330852 + MER46A DNA MER2_type 97 151 -85 362 293 44 68 chr2 164926312 164926561 -88330022 - MIR SINE MIR 0 262 20 193 288 113 73 chr2 164926572 164926749 -88329834 + MIR SINE MIR 33 216 -46 234 0 0 0 chr2 164927516 164927542 -88329041 + (T)n Simple_repeat Simple_repeat 1 26 0 319 204 23 0 chr2 164929325 164929413 -88327170 + L1ME2 LINE L1 4157 4246 -1900 332 284 12 0 chr2 164929422 164929503 -88327080 + MER58 DNA MER1_type 10 91 -2329 1739 231 62 38 chr2 164929519 164930120 -88326463 + L1ME2 LINE L1 5541 6155 -9 26 0 0 0 chr2 164931831 164931857 -88324726 + AT_rich Low_complexity Low_complexity 1 26 0 403 159 262 0 chr2 164932783 164932890 -88323693 - L1ME1 LINE L1 -6 6160 6026 1490 243 94 19 chr2 164934369 164934839 -88321744 + MLT1D LTR MaLR 1 505 0 1144 160 8 5 chr2 164934839 164935080 -88321503 + MLT1D-int LTR MaLR 1 356 -1015 1131 97 49 80 chr2 164935083 164935309 -88321274 - Tigger1 DNA MER2_type 0 2418 2200 712 221 0 7 chr2 164935307 164935443 -88321140 - Tigger1 DNA MER2_type -2281 137 3 * 3177 214 71 92 chr2 164935448 164936456 -88320127 + MLT1D-int LTR MaLR 361 1347 -24 247 302 96 55 chr2 164936510 164936872 -88319711 + L2 LINE L2 452 928 -2386 2455 68 0 0 chr2 164936872 164937167 -88319416 - AluY SINE Alu -16 295 1 247 302 96 55 chr2 164937167 164937227 -88319356 + L2 LINE L2 928 984 -2330 201 247 86 49 chr2 164939065 164939146 -88317437 + L3 LINE CR1 1486 1569 -8 411 314 145 0 chr2 164939423 164939582 -88317001 + MIR SINE MIR 10 191 -71 270 352 31 38 chr2 164940322 164940481 -88316102 - L2 LINE L2 -961 2353 2196 194 300 25 75 chr2 164940575 164940695 -88315888 + MIR SINE MIR 128 241 -21 355 315 81 34 chr2 164940798 164941182 -88315401 - L2 LINE L2 -1201 2113 1712 2275 99 0 0 chr2 164942317 164942609 -88313974 - AluSx SINE Alu -20 292 1 30 0 0 0 chr2 164943107 164943137 -88313446 + AT_rich Low_complexity Low_complexity 1 30 0 501 285 87 17 chr2 164943172 164943344 -88313239 - MIR SINE MIR -51 211 28 1498 155 40 40 chr2 164943428 164943751 -88312832 + MER58B DNA MER1_type 19 341 0 1434 50 75 5 chr2 164944236 164944435 -88312148 - L1PA6 LINE L1 -1 6153 5941 2124 117 117 18 chr2 164944701 164945096 -88311487 + L1MB3 LINE L1 5747 6180 -3 21 0 0 0 chr2 164945309 164945330 -88311253 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr2 164945687 164945722 -88310861 + AT_rich Low_complexity Low_complexity 1 35 0 344 304 159 24 chr2 164945902 164946280 -88310303 - L1MC4a LINE L1 -1920 5888 5460 32 57 0 0 chr2 164946550 164946603 -88309980 + AT_rich Low_complexity Low_complexity 1 53 0 661 260 88 37 chr2 164946793 164947209 -88309374 - L1MC/D LINE L1 -459 5662 5375 248 178 79 26 chr2 164947482 164947549 -88309034 + MIR SINE MIR 51 121 -94 237 178 0 0 chr2 164947855 164947900 -88308683 + T-rich Low_complexity Low_complexity 1 45 0 23 33 0 0 chr2 164948908 164948938 -88307645 + AT_rich Low_complexity Low_complexity 1 30 0 214 342 195 13 chr2 164949711 164949860 -88306723 - L2 LINE L2 -340 2974 2799 199 323 255 5 chr2 164949922 164950114 -88306469 + MIR SINE MIR 9 248 -14 600 142 277 65 chr2 164950432 164950495 -88306088 - MER5A DNA MER1_type 0 189 141 2198 100 3 17 chr2 164950495 164950796 -88305787 + AluSq SINE Alu 1 297 -16 600 142 277 65 chr2 164950796 164950887 -88305696 - MER5A DNA MER1_type -48 141 2 2028 119 4 0 chr2 164951147 164951424 -88305159 + AluSx SINE Alu 14 291 -21 537 235 27 7 chr2 164952194 164952343 -88304240 + MER103 DNA DNA 14 165 -1 367 282 14 150 chr2 164953886 164954166 -88302417 - L2 LINE L2 -2829 485 244 253 274 89 12 chr2 164954569 164954737 -88301846 + L1MEd LINE L1 895 1075 -5044 958 288 57 58 chr2 164955167 164955746 -88300837 + L1ME2 LINE L1 5366 5882 -282 23 54 0 0 chr2 164955894 164955931 -88300652 + AT_rich Low_complexity Low_complexity 1 37 0 247 271 37 9 chr2 164955947 164956054 -88300529 + L1MC4 LINE L1 7929 8038 -4 426 266 128 18 chr2 164956116 164956412 -88300171 - LTR16A LTR ERVL 0 450 77 531 290 20 30 chr2 164957404 164957604 -88298979 - LTR67 LTR ERVL -4 553 356 497 348 44 23 chr2 164961161 164961503 -88295080 + L1MEd LINE L1 4 352 -5767 246 256 51 26 chr2 164961516 164961594 -88294989 + L1MEd LINE L1 475 554 -5565 1287 119 0 10 chr2 164961651 164961844 -88294739 + L1M3e LINE L1 1 191 -6839 232 258 40 96 chr2 164962009 164962207 -88294376 + L1ME LINE L1 5665 5851 -319 186 128 0 0 chr2 164962287 164962326 -88294257 + (TA)n Simple_repeat Simple_repeat 2 40 0 184 215 13 89 chr2 164963378 164963457 -88293126 + L2 LINE L2 3198 3270 -2 379 168 39 136 chr2 164965963 164966118 -88290465 - L1MB7 LINE L1 -12 6172 6033 30 0 0 0 chr2 164966155 164966185 -88290398 + AT_rich Low_complexity Low_complexity 1 30 0 21 57 0 0 chr2 164966292 164966327 -88290256 + AT_rich Low_complexity Low_complexity 1 35 0 866 151 0 0 chr2 164966982 164967108 -88289475 + FLAM_C SINE Alu 1 126 -17 27 49 0 0 chr2 164967436 164967477 -88289106 + AT_rich Low_complexity Low_complexity 1 41 0 2261 177 23 8 chr2 164968190 164968665 -88287918 - L1MB7 LINE L1 0 6184 5703 24 0 0 0 chr2 164969799 164969823 -88286760 + AT_rich Low_complexity Low_complexity 1 24 0 35 24 0 0 chr2 164970159 164970201 -88286382 + AT_rich Low_complexity Low_complexity 1 42 0 408 269 134 77 chr2 164970433 164970976 -88285607 - L1ME3 LINE L1 -300 5862 5289 416 19 19 0 chr2 164972755 164972808 -88283775 + (TG)n Simple_repeat Simple_repeat 2 55 0 1268 257 75 35 chr2 164973265 164974010 -88282573 + L1MC5 LINE L1 7233 7911 -50 26 64 0 0 chr2 164975017 164975064 -88281519 + AT_rich Low_complexity Low_complexity 1 47 0 23 0 0 0 chr2 164975525 164975548 -88281035 + AT_rich Low_complexity Low_complexity 1 23 0 243 121 0 0 chr2 164979007 164979040 -88277543 + Alu SINE Alu 3 35 -268 * 284 189 0 0 chr2 164979035 164979088 -88277495 + FAM SINE Alu 126 178 -1 314 275 38 0 chr2 164979561 164979641 -88276942 + L2 LINE L2 3227 3309 -4 1562 168 9 63 chr2 164980250 164980566 -88276017 - AluJo SINE Alu -13 299 1 2391 54 7 7 chr2 164980929 164981223 -88275360 + AluY SINE Alu 2 295 -16 328 327 57 42 chr2 164981483 164981746 -88274837 - L2 LINE L2 -491 2823 2557 283 308 65 28 chr2 164981757 164981864 -88274719 - L2 LINE L2 -25 3247 3137 564 277 7 19 chr2 164982065 164982220 -88274363 - LTR67 LTR ERVL -3 554 402 184 191 0 71 chr2 164982845 164982887 -88273696 + L2 LINE L2 3218 3256 -16 21 36 0 0 chr2 164983227 164983255 -88273328 + AT_rich Low_complexity Low_complexity 1 28 0 376 238 12 12 chr2 164983532 164983616 -88272967 - L2 LINE L2 -19 3253 3170 293 293 253 35 chr2 164984641 164984839 -88271744 + MIR SINE MIR 7 247 -15 342 260 16 79 chr2 164986108 164986235 -88270348 - L2 LINE L2 -5 3308 3190 198 341 106 32 chr2 164986739 164986985 -88269598 - L2 LINE L2 -456 2858 2595 180 326 0 0 chr2 164987517 164987566 -88269017 + L2 LINE L2 3168 3216 -56 2865 169 77 12 chr2 164988071 164988668 -88267915 - L1MB8 LINE L1 -5 6173 5538 805 111 0 0 chr2 164988686 164988803 -88267780 + AluY SINE Alu 187 303 -8 413 125 88 0 chr2 164988807 164988898 -88267685 - L1MB8 LINE L1 -644 5526 5426 254 239 55 55 chr2 164988948 164989057 -88267526 - L1ME4a LINE L1 0 6121 6013 700 281 47 4 chr2 164989382 164989635 -88266948 - L1ME4a LINE L1 -348 5773 5510 820 284 87 38 chr2 164989780 164990146 -88266437 - LTR33A LTR ERVL -2 521 138 1450 133 39 0 chr2 164990393 164990649 -88265934 + L1MA2 LINE L1 6039 6304 0 2023 139 0 10 chr2 164991244 164991553 -88265030 - AluSx SINE Alu 0 312 7 23 0 0 0 chr2 164993888 164993911 -88262672 + AT_rich Low_complexity Low_complexity 1 23 0 200 189 0 0 chr2 164994541 164994578 -88262005 + (CA)n Simple_repeat Simple_repeat 2 38 0 540 292 129 20 chr2 164994682 164995031 -88261552 - L1MC4a LINE L1 -1884 5924 5538 508 230 40 17 chr2 164995502 164995676 -88260907 + MER5B DNA MER1_type 1 178 0 525 234 65 37 chr2 164995678 164995892 -88260691 + L1MC5 LINE L1 7009 7228 -733 717 247 5 75 chr2 164995902 164996088 -88260495 + MER5B DNA MER1_type 6 178 0 260 236 67 0 chr2 164996561 164996650 -88259933 + L1MC5 LINE L1 7680 7774 -187 21 36 0 0 chr2 164998024 164998052 -88258531 + AT_rich Low_complexity Low_complexity 1 28 0 188 194 0 0 chr2 164998167 164998198 -88258385 - MIR SINE MIR -202 60 30 2034 132 31 0 chr2 165000343 165000631 -88255952 + AluSx SINE Alu 1 297 -15 586 205 63 24 chr2 165002137 165002264 -88254319 - L2 LINE L2 0 3313 3182 194 275 0 0 chr2 165002323 165002363 -88254220 + L2 LINE L2 3019 3058 -214 213 39 0 0 chr2 165002373 165002399 -88254184 + (CA)n Simple_repeat Simple_repeat 2 27 0 2537 67 0 0 chr2 165003906 165004218 -88252365 + AluSx SINE Alu 1 312 0 1622 171 0 38 chr2 165005632 165005925 -88250658 - AluJo SINE Alu -30 282 1 858 243 143 53 chr2 165008735 165009282 -88247301 - L1MC4a LINE L1 -1899 5909 5314 21 0 0 0 chr2 165010211 165010232 -88246351 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr2 165010389 165010415 -88246168 + AT_rich Low_complexity Low_complexity 1 26 0 2459 75 0 0 chr2 165010415 165010721 -88245862 - AluSc SINE Alu -3 306 1 262 326 118 0 chr2 165011783 165011927 -88244656 + MIR3 SINE MIR 46 206 -2 1804 118 0 76 chr2 165012160 165012474 -88244109 - AluSg1 SINE Alu -19 290 1 2352 53 0 11 chr2 165013369 165013681 -88242902 - AluY SINE Alu 0 310 2 1694 161 3 28 chr2 165013832 165014118 -88242465 - AluJo SINE Alu -18 294 16 1185 148 0 0 chr2 165015581 165015770 -88240813 - Tigger7 DNA MER2_type -1 2486 2298 * 1875 175 16 6 chr2 165015766 165016081 -88240502 - Tigger7 DNA MER2_type -415 318 1 2001 305 76 38 chr2 165018575 165020248 -88236335 - L1MEc LINE L1 -4626 1770 35 503 299 39 39 chr2 165020732 165020943 -88235640 - MIR SINE MIR -50 212 3 433 265 157 60 chr2 165021026 165021294 -88235289 - L2 LINE L2 -597 2717 2424 359 260 47 16 chr2 165021498 165021625 -88234958 + MIR SINE MIR 118 248 -14 309 89 0 0 chr2 165021764 165021809 -88234774 + (TG)n Simple_repeat Simple_repeat 1 45 0 436 297 282 0 chr2 165022220 165022422 -88234161 + MIR SINE MIR 4 262 0 2050 120 21 3 chr2 165023497 165023788 -88232795 + AluSx SINE Alu 1 296 -16 2055 117 0 7 chr2 165024485 165024766 -88231817 - AluSx SINE Alu -33 279 1 210 266 63 38 chr2 165025529 165025608 -88230975 - L2 LINE L2 -25 3288 3208 1857 164 3 10 chr2 165025871 165026181 -88230402 + AluJo SINE Alu 1 308 -4 2161 118 0 0 chr2 165026220 165026508 -88230075 - AluSx SINE Alu -24 288 1 23 0 0 0 chr2 165027347 165027370 -88229213 + AT_rich Low_complexity Low_complexity 1 23 0 416 300 31 0 chr2 165029168 165029298 -88227285 - L3 LINE CR1 -18 1559 1426 2033 122 17 0 chr2 165031159 165031447 -88225136 + AluSx SINE Alu 1 293 -19 263 240 53 27 chr2 165031602 165031677 -88224906 - MIR3 SINE MIR -24 184 108 995 191 187 0 chr2 165034471 165034744 -88221839 - MER33 DNA MER1_type 0 324 1 228 226 81 0 chr2 165037540 165037602 -88218981 + MIR SINE MIR 189 255 -7 373 228 132 22 chr2 165041415 165041551 -88215032 + MIR SINE MIR 107 257 -5 938 291 163 22 chr2 165041890 165042928 -88213655 - L2 LINE L2 -70 3243 2005 499 196 0 0 chr2 165043391 165043498 -88213085 - MIR SINE MIR -38 224 118 304 262 12 0 chr2 165047215 165047299 -88209284 + MIR SINE MIR 111 195 -67 198 0 0 0 chr2 165047630 165047652 -88208931 + (GGCTG)n Simple_repeat Simple_repeat 5 26 0 662 263 6 0 chr2 165049485 165049641 -88206942 + MER96 DNA MER1_type? 1 157 -18 209 279 13 38 chr2 165050025 165050104 -88206479 + MIR SINE MIR 152 228 -34 2204 141 22 14 chr2 165052602 165052964 -88203619 - MLT1A1 LTR MaLR 0 365 1 298 263 42 53 chr2 165053530 165053625 -88202958 + L2 LINE L2 3213 3306 -7 21 71 0 0 chr2 165053767 165053809 -88202774 + AT_rich Low_complexity Low_complexity 1 42 0 658 314 52 29 chr2 165054051 165054494 -88202089 - L2 LINE L2 -5 3308 2856 378 198 23 5 chr2 165054622 165054758 -88201825 - L2 LINE L2 -1366 1948 1751 1441 117 40 5 chr2 165057654 165057876 -88198707 - MER30 DNA MER1_type 0 230 1 183 42 0 0 chr2 165059503 165059527 -88197056 + (TATG)n Simple_repeat Simple_repeat 3 26 0 296 271 84 9 chr2 165065554 165065661 -88190922 + MER5B DNA MER1_type 63 177 -1 299 232 167 54 chr2 165065985 165066153 -88190430 - MIR SINE MIR -7 255 69 226 96 96 39 chr2 165066258 165066310 -88190273 + MER113 DNA MER1_type? 136 190 -331 1204 139 0 0 chr2 165066403 165066569 -88190014 + FRAM SINE Alu 1 161 -15 252 235 0 44 chr2 165066570 165066638 -88189945 + MER113 DNA MER1_type? 453 517 -4 1228 158 157 92 chr2 165066894 165067289 -88189294 + L1ME2 LINE L1 5679 6110 -54 2221 110 10 0 chr2 165067289 165067590 -88188993 + AluSq SINE Alu 1 304 -9 1228 158 157 92 chr2 165067590 165067649 -88188934 + L1ME2 LINE L1 6110 6164 0 2162 113 0 20 chr2 165067773 165068075 -88188508 - AluSx SINE Alu -16 296 1 384 242 157 68 chr2 165070456 165070737 -88185846 - MLT1J LTR MaLR -202 309 4 213 0 53 26 chr2 165071630 165071668 -88184915 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 218 289 0 77 chr2 165071738 165071842 -88184741 - MIR SINE MIR 0 262 167 221 321 12 0 chr2 165073365 165073446 -88183137 - MIR SINE MIR -97 165 84 2119 55 51 39 chr2 165073577 165073888 -88182695 - L1PA7 LINE L1 -2 6152 5838 439 168 56 47 chr2 165074336 165074443 -88182140 - MER103 DNA DNA 0 166 59 2038 189 114 6 chr2 165074717 165075189 -88181394 - Charlie1b DNA MER1_type 0 523 1 587 266 176 0 chr2 165076077 165076276 -88180307 + MIR SINE MIR 29 262 0 974 247 109 19 chr2 165076489 165076902 -88179681 - Zaphod DNA AcHobo 0 4031 3582 * 1025 207 60 64 chr2 165076887 165077001 -88179582 - Zaphod DNA AcHobo -3043 988 875 2080 122 27 3 chr2 165077001 165077295 -88179288 - AluSg SINE Alu -9 301 1 1025 207 60 64 chr2 165077295 165077698 -88178885 - Zaphod DNA AcHobo -3156 875 473 5043 126 14 40 chr2 165077703 165078216 -88178367 + L1MB2 LINE L1 5311 5793 -378 1861 176 0 0 chr2 165078216 165078506 -88178077 + AluJb SINE Alu 1 290 -22 5043 126 14 40 chr2 165078506 165078875 -88177708 + L1MB2 LINE L1 5793 6170 -1 3668 234 62 12 chr2 165078992 165080032 -88176551 + L1MC/D LINE L1 3949 5039 -1107 570 164 16 47 chr2 165080032 165080160 -88176423 + AluJb SINE Alu 189 312 0 2579 145 61 91 chr2 165080160 165080437 -88176146 + L1MC/D LINE L1 5049 5333 -1000 3001 95 2 0 chr2 165080437 165080846 -88175737 + L1PA8 LINE L1 5749 6158 -14 2579 145 61 91 chr2 165080846 165081329 -88175254 + L1MC/D LINE L1 5333 5809 -524 21 0 0 0 chr2 165081359 165081380 -88175203 + AT_rich Low_complexity Low_complexity 1 21 0 334 230 58 0 chr2 165081439 165081526 -88175057 - ERVL LTR ERVL -1909 3855 3764 255 57 0 57 chr2 165081595 165081648 -88174935 + (GGA)n Simple_repeat Simple_repeat 3 52 0 906 284 105 14 chr2 165081664 165082034 -88174549 - Zaphod DNA AcHobo -3537 494 91 410 53 18 0 chr2 165082036 165082093 -88174490 + (TG)n Simple_repeat Simple_repeat 1 58 0 1431 172 72 48 chr2 165082220 165082444 -88174139 + MER44D DNA MER2_type 1 218 -2273 5022 153 33 12 chr2 165082444 165083291 -88173292 + MER6 DNA MER2_type 1 865 0 1431 172 72 48 chr2 165083291 165083397 -88173186 + MER44D DNA MER2_type 218 609 0 435 96 36 0 chr2 165084110 165084193 -88172390 + CT-rich Low_complexity Low_complexity 1 86 0 1901 165 38 22 chr2 165084324 165084693 -88171890 - THE1C LTR MaLR 0 375 1 511 224 118 35 chr2 165084789 165084905 -88171678 + MER20 DNA MER1_type 36 172 -47 419 0 20 0 chr2 165084905 165084956 -88171627 + (TAA)n Simple_repeat Simple_repeat 2 53 0 511 224 118 35 chr2 165084956 165085009 -88171574 + MER20 DNA MER1_type 172 219 0 926 210 149 14 chr2 165085055 165085331 -88171252 - MLT1C LTR MaLR 0 467 155 485 215 92 61 chr2 165086151 165086314 -88170269 - MLT1C LTR MaLR -299 168 1 1468 263 135 2 chr2 165086625 165087142 -88169441 + MLT1G LTR MaLR 3 588 -2 1733 128 50 61 chr2 165087186 165087618 -88168965 + THE1C LTR MaLR 1 375 0 383 326 41 0 chr2 165087720 165087867 -88168716 - MIR SINE MIR -9 253 101 4143 110 35 74 chr2 165088028 165088746 -88167837 - LTR8 LTR ERV1 0 691 2 3598 175 82 13 chr2 165089194 165089593 -88166990 + L1MCa LINE L1 19 389 -6037 225 0 0 0 chr2 165089593 165089618 -88166965 + (CA)n Simple_repeat Simple_repeat 2 26 0 3598 175 82 13 chr2 165089618 165089972 -88166611 + L1MCa LINE L1 389 824 -5602 371 143 231 0 chr2 165089974 165090065 -88166518 - MER1B DNA MER1_type -185 112 1 272 354 139 0 chr2 165090305 165090463 -88166120 - MIR SINE MIR -79 183 4 3342 153 106 52 chr2 165090605 165091111 -88165472 - L1MD1 LINE L1 0 6242 5676 1556 159 47 29 chr2 165091111 165091427 -88165156 - AluJb SINE Alu 0 321 1 3342 153 106 52 chr2 165091427 165091690 -88164893 - L1MD1 LINE L1 -566 5676 5429 * 4180 243 19 43 chr2 165091660 165091878 -88164705 - L1MDa LINE L1 -2458 4082 3860 1972 130 18 0 chr2 165091878 165092180 -88164403 - AluSx SINE Alu 0 307 1 4180 243 19 43 chr2 165092180 165093015 -88163568 - L1MDa LINE L1 -2680 3860 3006 2198 123 13 13 chr2 165093015 165093325 -88163258 - AluSx SINE Alu -2 310 1 4180 243 19 43 chr2 165093325 165093422 -88163161 - L1MDa LINE L1 -3534 3006 2908 1585 174 3 68 chr2 165093422 165093743 -88162840 - AluJb SINE Alu -12 300 1 4180 243 19 43 chr2 165093743 165094040 -88162543 - L1MDa LINE L1 -3632 2908 2666 3681 166 4 36 chr2 165094041 165094766 -88161817 - L1MB3 LINE L1 -36 6147 5446 9216 197 107 20 chr2 165094767 165095066 -88161517 - L1MDa LINE L1 -3858 2682 2411 2154 139 10 0 chr2 165095066 165095375 -88161208 - AluSx SINE Alu 0 312 1 9216 197 107 20 chr2 165095375 165097526 -88159057 - L1MDa LINE L1 -4129 2411 18 400 291 80 7 chr2 165097716 165097867 -88158716 - MER103 DNA DNA -3 163 2 25 0 0 0 chr2 165098408 165098433 -88158150 + AT_rich Low_complexity Low_complexity 1 25 0 371 257 230 0 chr2 165099637 165099789 -88156794 + MIR3 SINE MIR 13 199 -9 423 243 81 22 chr2 165099981 165100117 -88156466 + MIR SINE MIR 13 156 -106 381 360 7 20 chr2 165100991 165101144 -88155439 + MIR SINE MIR 103 253 -9 295 255 78 49 chr2 165101151 165101253 -88155330 + L2 LINE L2 3104 3208 -64 337 226 157 9 chr2 165101332 165101447 -88155136 - MLT1H LTR MaLR -13 536 405 1022 210 63 34 chr2 165101535 165101773 -88154810 - MLT1H LTR MaLR -304 245 1 351 268 84 101 chr2 165103480 165103659 -88152924 - MER5A DNA MER1_type -5 184 9 1192 195 137 117 chr2 165103729 165103790 -88152793 - MLT1D LTR MaLR -7 498 440 2551 179 11 4 chr2 165103790 165104260 -88152323 + L1MB3 LINE L1 5704 6176 -7 1192 195 137 117 chr2 165104260 165104686 -88151897 - MLT1D LTR MaLR -65 440 1 320 364 45 0 chr2 165105094 165105248 -88151335 - MIR SINE MIR -21 241 81 251 272 37 12 chr2 165105282 165105363 -88151220 + MIR SINE MIR 15 97 -165 543 270 38 49 chr2 165107727 165107912 -88148671 + MIR SINE MIR 28 210 -52 426 292 62 31 chr2 165109947 165110108 -88146475 + MIR SINE MIR 22 187 -75 385 289 111 45 chr2 165110123 165110455 -88146128 - MLT1K LTR MaLR -68 520 167 1000 295 110 41 chr2 165110457 165111166 -88145417 - L2 LINE L2 0 3313 2524 359 320 61 20 chr2 165111409 165111556 -88145027 - MIR3 SINE MIR -32 176 24 324 353 93 43 chr2 165114536 165114836 -88141747 + L2 LINE L2 2921 3235 -37 516 219 65 32 chr2 165114905 165115060 -88141523 - MER5A DNA MER1_type 0 189 30 1209 207 26 16 chr2 165115286 165115635 -88140948 + HsTC2 DNA Tc2 1 406 -1492 489 276 173 0 chr2 165115658 165115814 -88140769 + MER5A DNA MER1_type 4 186 -3 536 211 10 0 chr2 165115816 165115920 -88140663 + HsTC2 DNA Tc2 409 513 -1385 1014 216 123 33 chr2 165115921 165116320 -88140263 + HsTC2 DNA Tc2 1287 1897 -1 2384 107 0 3 chr2 165116462 165116659 -88139924 - AluSx SINE Alu -4 308 111 219 69 0 0 chr2 165116659 165116688 -88139895 + (CGGGG)n Simple_repeat Simple_repeat 1 29 0 2384 107 0 3 chr2 165116688 165116799 -88139784 - AluSx SINE Alu -201 111 1 351 324 52 7 chr2 165117075 165117211 -88139372 - MIR SINE MIR -68 194 53 805 214 18 6 chr2 165117771 165117939 -88138644 + MER5B DNA MER1_type 2 171 -7 2030 124 10 23 chr2 165118031 165118338 -88138245 + AluSx SINE Alu 1 303 -9 236 287 24 86 chr2 165118387 165118596 -88137987 - L1ME4a LINE L1 -1 6120 5925 883 195 44 44 chr2 165119068 165119120 -88137463 - MSTC LTR MaLR -14 414 363 1604 172 62 7 chr2 165119120 165119411 -88137172 + AluJb SINE Alu 1 307 -5 883 195 44 44 chr2 165119411 165119562 -88137021 - MSTC LTR MaLR -65 363 213 1976 115 0 38 chr2 165119562 165119849 -88136734 - AluSx SINE Alu -36 276 1 883 195 44 44 chr2 165119849 165119904 -88136679 - MSTC LTR MaLR -215 213 152 1612 157 55 7 chr2 165119904 165120178 -88136405 - AluJb SINE Alu -23 289 3 883 195 44 44 chr2 165120178 165120189 -88136394 - MSTC LTR MaLR -275 153 143 244 125 25 0 chr2 165120192 165120232 -88136351 - Alu SINE Alu -177 126 86 187 292 0 0 chr2 165121194 165121242 -88135341 + L2 LINE L2 3207 3254 -18 331 339 0 0 chr2 165121841 165121950 -88134633 + C-rich Low_complexity Low_complexity 1 109 0 232 169 34 47 chr2 165121967 165122115 -88134468 + (CACCC)n Simple_repeat Simple_repeat 3 148 0 313 304 40 40 chr2 165124093 165124241 -88132342 - L1MCa LINE L1 -4038 2388 2241 296 252 84 17 chr2 165124257 165124376 -88132207 + MER3 DNA MER1_type 83 209 0 2129 112 0 30 chr2 165128557 165128861 -88127722 + AluSx SINE Alu 1 295 -17 608 182 139 27 chr2 165128985 165129038 -88127545 - L1ME2 LINE L1 0 6164 6118 2285 106 10 0 chr2 165129038 165129341 -88127242 - AluSq SINE Alu -7 306 1 608 182 139 27 chr2 165129341 165129474 -88127109 - L1ME2 LINE L1 -46 6118 5957 447 343 57 41 chr2 165130088 165130403 -88126180 + L2 LINE L2 2376 2695 -619 427 309 170 65 chr2 165130492 165130874 -88125709 + L2 LINE L2 2848 3269 -3 303 93 0 0 chr2 165131326 165131369 -88125214 + (A)n Simple_repeat Simple_repeat 1 43 0 270 307 40 33 chr2 165131465 165131615 -88124968 - MER69A DNA AcHobo -2 175 25 1913 155 12 78 chr2 165132873 165132968 -88123615 + L1PB3 LINE L1 5778 5878 -276 2305 73 0 7 chr2 165132968 165133254 -88123329 - AluY SINE Alu -18 293 10 1913 155 12 78 chr2 165133254 165133558 -88123025 + L1PB3 LINE L1 5878 6151 -3 23 0 0 0 chr2 165133563 165133586 -88122997 + AT_rich Low_complexity Low_complexity 1 23 0 1984 136 10 7 chr2 165133661 165133962 -88122621 + AluJo SINE Alu 1 302 -10 245 257 28 18 chr2 165134370 165134479 -88122104 + (CA)n Simple_repeat Simple_repeat 1 110 0 3321 132 25 16 chr2 165135503 165136071 -88120512 + MER50 LTR ERV1 1 573 -161 1305 92 0 0 chr2 165136071 165136235 -88120348 - AluSg/x SINE Alu -15 297 134 845 75 15 30 chr2 165136235 165136368 -88120215 + MER50 LTR ERV1 567 697 -37 399 280 31 16 chr2 165137304 165137451 -88119132 + MIR SINE MIR 5 153 -67 305 202 61 70 chr2 165137698 165137812 -88118771 - MLT1L LTR MaLR -333 282 170 278 221 88 0 chr2 165137998 165138066 -88118517 + MIR SINE MIR 174 247 -15 1048 190 72 0 chr2 165138464 165138659 -88117924 + MER3 DNA MER1_type 1 209 0 1338 169 72 22 chr2 165140105 165140383 -88116200 - L1MB4 LINE L1 -3 6177 5886 567 175 95 7 chr2 165141266 165141403 -88115180 + MER103 DNA DNA 16 164 -2 638 280 35 19 chr2 165141981 165142238 -88114345 - MIR SINE MIR 0 262 2 893 247 125 55 chr2 165142335 165142719 -88113864 + MLT1J LTR MaLR 101 511 0 186 43 0 0 chr2 165143358 165143381 -88113202 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 378 0 0 0 chr2 165143919 165143961 -88112622 + (TG)n Simple_repeat Simple_repeat 2 43 0 482 261 94 7 chr2 165143961 165144099 -88112484 - MIR SINE MIR -74 188 39 604 212 9 0 chr2 165144145 165144258 -88112325 + MER81 DNA DNA 1 114 0 1716 109 174 0 chr2 165144863 165145128 -88111455 - AluY SINE Alu 0 311 1 971 128 134 0 chr2 165145128 165145292 -88111291 + Tigger7 DNA MER2_type 2302 2487 0 187 280 144 24 chr2 165146794 165146919 -88109664 - L2 LINE L2 -961 2353 2214 2076 137 0 16 chr2 165149365 165149672 -88106911 + AluJo SINE Alu 1 302 -10 1420 159 78 62 chr2 165150155 165150475 -88106108 + MLT1B LTR MaLR 66 390 0 218 178 44 0 chr2 165150475 165150520 -88106063 + MER5A DNA MER1_type 53 99 -90 330 83 21 0 chr2 165150585 165150633 -88105950 + MSTD LTR MaLR 1 49 -347 23 54 0 0 chr2 165150638 165150675 -88105908 + AT_rich Low_complexity Low_complexity 1 37 0 1421 194 7 25 chr2 165150675 165150953 -88105630 - AluJb SINE Alu -39 273 1 867 188 134 21 chr2 165150953 165151271 -88105312 + MSTD LTR MaLR 38 396 0 213 277 62 0 chr2 165151615 165151680 -88104903 - L2 LINE L2 -36 3236 3168 183 319 0 0 chr2 165152044 165152113 -88104470 - L2 LINE L2 -560 2754 2686 1135 129 14 69 chr2 165152759 165152976 -88103607 + L1MB3 LINE L1 5769 5973 -210 241 214 143 0 chr2 165153635 165153691 -88102892 - MLT2E LTR ERVL -192 436 373 2092 140 0 10 chr2 165153891 165154205 -88102378 + AluSx SINE Alu 1 311 -1 1982 227 137 7 chr2 165155202 165155739 -88100844 + MLT2E LTR ERVL 11 660 -3 202 243 14 68 chr2 165156697 165156771 -88099812 + MIR SINE MIR 35 104 -104 974 249 122 47 chr2 165156873 165157282 -88099301 + MLT1J LTR MaLR 72 511 0 2134 130 0 17 chr2 165157421 165157721 -88098862 - AluSx SINE Alu -17 295 1 1431 140 33 29 chr2 165158389 165158661 -88097922 - L1MA5A LINE L1 -1 6296 6024 2297 206 36 14 chr2 165159587 165160091 -88096492 - MLT2B1 LTR ERVL 0 520 6 385 238 0 0 chr2 165160244 165160324 -88096259 - MER94 DNA DNA -53 81 2 735 212 20 40 chr2 165160458 165160656 -88095927 - LTR67 LTR ERVL -3 554 361 230 54 0 27 chr2 165162218 165162255 -88094328 + (CAAAAA)n Simple_repeat Simple_repeat 2 37 0 558 151 44 12 chr2 165162465 165162569 -88094014 + MLT1C LTR MaLR 1 105 -371 2136 131 23 0 chr2 165162600 165162905 -88093678 - AluSx SINE Alu 0 312 1 456 149 0 0 chr2 165162905 165162972 -88093611 + MLT1C LTR MaLR 401 467 0 197 0 0 67 chr2 165163105 165163135 -88093448 + (TAAAAA)n Simple_repeat Simple_repeat 2 29 0 1764 193 0 0 chr2 165164289 165164589 -88091994 + AluJo SINE Alu 1 300 -12 197 298 107 0 chr2 165165246 165165330 -88091253 - MIR SINE MIR -87 175 83 929 179 23 17 chr2 165165330 165165503 -88091080 - LTR40b LTR ERVL 0 462 289 1072 272 85 15 chr2 165165583 165165914 -88090669 - LTR40a LTR ERVL -165 354 1 3062 141 42 26 chr2 165166099 165166640 -88089943 + MER44D DNA MER2_type 1 605 0 3249 149 38 53 chr2 165167469 165168153 -88088430 + L1MD1 LINE L1 5569 6242 0 1944 78 0 58 chr2 165168687 165168982 -88087601 - L1PA12 LINE L1 0 6168 5891 2445 53 0 0 chr2 165170827 165171141 -88085442 - AluY SINE Alu 0 314 1 2325 106 0 0 chr2 165171285 165171588 -88084995 - AluSx SINE Alu -9 303 1 784 228 160 68 chr2 165171893 165172486 -88084097 + L1MC5 LINE L1 7260 7907 -54 470 196 0 21 chr2 165172508 165172605 -88083978 + AluJ SINE Alu 44 138 -174 1455 196 18 14 chr2 165172605 165172914 -88083669 + AluJo SINE Alu 3 312 0 954 191 0 0 chr2 165173213 165173395 -88083188 + AluJ SINE Alu 120 301 0 1350 219 32 0 chr2 165173407 165173526 -88083057 + AluJo SINE Alu 1 115 -197 396 0 0 0 chr2 165173526 165173570 -88083013 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 1350 219 32 0 chr2 165173570 165173729 -88082854 + AluJo SINE Alu 115 288 -24 1353 271 68 20 chr2 165173729 165174266 -88082317 + L1MC4a LINE L1 5387 5952 -1856 2380 43 20 33 chr2 165174266 165174570 -88082013 + AluY SINE Alu 2 301 -10 1971 180 143 119 chr2 165174730 165175583 -88081000 - LTR28 LTR ERV1 0 1020 1 894 136 68 0 chr2 165177368 165177515 -88079068 + MSTC LTR MaLR 1 157 -271 656 179 0 0 chr2 165177526 165177632 -88078951 + FLAM_C SINE Alu 21 126 -17 1117 189 42 39 chr2 165177635 165177646 -88078937 + MSTC LTR MaLR 143 152 -276 1634 156 51 7 chr2 165177646 165177921 -88078662 + AluJb SINE Alu 3 289 -23 1117 189 42 39 chr2 165177921 165177976 -88078607 + MSTC LTR MaLR 152 205 -223 1961 115 0 38 chr2 165177976 165178263 -88078320 + AluSx SINE Alu 1 276 -36 1117 189 42 39 chr2 165178263 165178413 -88078170 + MSTC LTR MaLR 205 364 -64 1602 172 62 3 chr2 165178413 165178703 -88077880 - AluJb SINE Alu -5 307 1 1117 189 42 39 chr2 165178703 165178769 -88077814 + MSTC LTR MaLR 364 428 0 1286 68 11 0 chr2 165179625 165179802 -88076781 + (TTTC)n Simple_repeat Simple_repeat 1 179 0 186 133 0 0 chr2 165179803 165179833 -88076750 + (TTCC)n Simple_repeat Simple_repeat 4 33 0 502 200 83 8 chr2 165179833 165179953 -88076630 - FLAM_A SINE Alu 0 133 5 1728 156 0 30 chr2 165179993 165180295 -88076288 - AluJb SINE Alu -19 293 1 226 221 30 114 chr2 165180357 165180488 -88076095 - MER103 DNA DNA -27 139 20 871 178 15 50 chr2 165180699 165180901 -88075682 - MER3 DNA MER1_type 0 209 15 186 316 68 15 chr2 165180961 165181094 -88075489 + L2 LINE L2 3133 3272 0 230 214 48 39 chr2 165181185 165181288 -88075295 - L1ME4a LINE L1 -43 6078 5975 3666 208 52 16 chr2 165181314 165182274 -88074309 - L1ME1 LINE L1 -5 6161 5165 367 276 78 31 chr2 165182441 165182698 -88073885 - L1ME4a LINE L1 -238 5883 5615 321 317 0 17 chr2 165184992 165185112 -88071471 + MIR SINE MIR 100 217 -45 2372 88 3 0 chr2 165185301 165185596 -88070987 + AluSq SINE Alu 1 296 -17 299 284 0 0 chr2 165186369 165186457 -88070126 - MIR SINE MIR -122 140 53 1404 66 0 0 chr2 165187706 165187873 -88068710 + AluSc SINE Alu 132 298 -11 270 402 71 4 chr2 165187986 165188225 -88068358 - L3 LINE CR1 -36 1541 1287 201 294 220 17 chr2 165188224 165188401 -88068182 - MIR SINE MIR 0 262 50 * 416 231 141 30 chr2 165188431 165188630 -88067953 - L3 LINE CR1 -293 1284 1064 2174 120 0 10 chr2 165188634 165188934 -88067649 - AluSx SINE Alu -15 297 1 1464 238 61 72 chr2 165189580 165190100 -88066483 + L1MC4a LINE L1 5160 5125 -1021 3220 177 20 2 chr2 165190100 165190647 -88065936 + MER41D LTR ERV1 1 557 0 1464 238 61 72 chr2 165190647 165190921 -88065662 + L1MC4a LINE L1 5124 5399 -747 24 0 0 0 chr2 165191912 165191936 -88064647 + AT_rich Low_complexity Low_complexity 1 24 0 382 228 56 72 chr2 165193658 165193838 -88062745 - MER69A DNA AcHobo 0 177 1 512 196 59 37 chr2 165194117 165194336 -88062247 + L1ME3A LINE L1 5873 6170 0 2292 112 0 3 chr2 165194342 165194661 -88061922 + AluSq SINE Alu 1 318 0 2166 120 7 0 chr2 165195435 165195735 -88060848 - AluSq SINE Alu -11 302 1 414 285 38 6 chr2 165196079 165196237 -88060346 + MIR SINE MIR 74 236 -26 2399 82 3 0 chr2 165196868 165197162 -88059421 + AluSg SINE Alu 1 295 -15 536 272 25 55 chr2 165197257 165197492 -88059091 + MIR SINE MIR 12 239 -23 546 227 80 23 chr2 165197742 165197918 -88058665 + L1ME1 LINE L1 5962 6147 -19 190 304 11 54 chr2 165198623 165198715 -88057868 + MIR SINE MIR 31 118 -90 3702 134 1 68 chr2 165200202 165200300 -88056283 + L1MB3 LINE L1 5523 5626 -557 1769 191 0 3 chr2 165200300 165200609 -88055974 + AluJo SINE Alu 1 308 -4 3702 134 1 68 chr2 165200609 165201211 -88055372 + L1MB3 LINE L1 5626 6176 -7 2475 78 0 0 chr2 165201335 165201643 -88054940 - AluY SINE Alu -3 308 1 455 216 37 60 chr2 165202210 165202344 -88054239 - L1ME4a LINE L1 -24 6097 5967 327 329 163 31 chr2 165202668 165202973 -88053610 - L3b LINE CR1 -10 1573 1197 322 250 0 0 chr2 165202973 165203053 -88053530 + MER116 DNA Mariner 1 80 0 327 329 163 31 chr2 165203053 165203164 -88053419 - L3b LINE CR1 -386 1197 1102 369 0 0 0 chr2 165204350 165204391 -88052192 + (CA)n Simple_repeat Simple_repeat 1 41 0 211 254 152 0 chr2 165204966 165205063 -88051520 + MIR SINE MIR 40 154 -87 238 310 69 9 chr2 165205851 165205967 -88050616 - L2 LINE L2 -42 3230 3108 605 211 40 105 chr2 165206118 165206346 -88050237 - L1MC5 LINE L1 -44 7917 7705 214 91 0 45 chr2 165206865 165206909 -88049674 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 1563 163 54 22 chr2 165206911 165207188 -88049395 - AluJb SINE Alu -26 286 1 251 338 19 25 chr2 165208005 165208162 -88048421 - MIR SINE MIR -31 231 76 2707 109 46 12 chr2 165208419 165208833 -88047750 + MSTC LTR MaLR 1 428 0 195 125 0 0 chr2 165209715 165209747 -88046836 - L2 LINE L2 -5 3308 3277 1127 170 31 87 chr2 165209761 165209889 -88046694 - MLT1C LTR MaLR -188 279 145 1888 146 20 10 chr2 165209889 165210184 -88046399 + AluJo SINE Alu 1 298 -14 1127 170 31 87 chr2 165210184 165210344 -88046239 - MLT1C LTR MaLR -322 145 7 355 230 133 18 chr2 165210380 165210493 -88046090 + MIR SINE MIR 115 240 -22 350 346 83 22 chr2 165210766 165210994 -88045589 + L2 LINE L2 2986 3227 -45 1185 239 156 41 chr2 165210994 165211487 -88045096 + MLT1L LTR MaLR 3 552 -63 268 250 80 11 chr2 165211516 165211604 -88044979 + MLT1L LTR MaLR 521 614 -1 393 200 12 12 chr2 165211777 165211862 -88044721 - MIR SINE MIR -118 144 60 243 0 0 0 chr2 165212574 165212601 -88043982 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 225 0 0 0 chr2 165212846 165212871 -88043712 + (T)n Simple_repeat Simple_repeat 1 25 0 1980 112 7 44 chr2 165214638 165214819 -88041764 - AluSq SINE Alu 0 305 138 2240 100 0 0 chr2 165214819 165215153 -88041430 - AluY SINE Alu 0 311 1 1980 112 7 44 chr2 165215153 165215287 -88041296 - AluSq SINE Alu -167 138 1 1835 162 0 10 chr2 165215299 165215589 -88040994 - AluJb SINE Alu -25 287 1 3388 195 25 6 chr2 165216541 165217193 -88039390 + L1MB5 LINE L1 5503 6166 -8 301 198 0 11 chr2 165217812 165217882 -88038701 + Alu SINE Alu 1 52 -251 2493 79 7 0 chr2 165218396 165218699 -88037884 + AluSx SINE Alu 1 305 -7 1957 125 40 14 chr2 165218972 165219268 -88037315 - AluSx SINE Alu -8 304 1 740 224 9 75 chr2 165219650 165219878 -88036705 - L1ME LINE L1 -385 5736 5524 439 317 48 0 chr2 165219916 165220083 -88036500 + MIR SINE MIR 39 213 -49 1979 141 0 3 chr2 165220089 165220373 -88036210 + AluJb SINE Alu 1 283 -29 2623 169 31 33 chr2 165220586 165221138 -88035445 - L1MB8 LINE L1 0 6178 5628 234 219 146 0 chr2 165221307 165221389 -88035194 + MIR SINE MIR 169 262 0 225 65 0 0 chr2 165221799 165221830 -88034753 + (GA)n Simple_repeat Simple_repeat 1 31 0 1543 184 34 10 chr2 165221888 165222182 -88034401 - AluJb SINE Alu -9 303 3 21 36 0 0 chr2 165222207 165222235 -88034348 + AT_rich Low_complexity Low_complexity 1 28 0 509 132 18 140 chr2 165222241 165222355 -88034228 + L1PA16 LINE L1 6045 6144 -22 335 22 0 22 chr2 165222355 165222400 -88034183 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 938 160 0 0 chr2 165222400 165222544 -88034039 - FRAM SINE Alu -19 147 4 21 57 0 0 chr2 165222548 165222583 -88034000 + AT_rich Low_complexity Low_complexity 1 35 0 565 289 44 4 chr2 165222795 165223020 -88033563 - L1MC4a LINE L1 -1729 6079 5846 279 0 0 0 chr2 165224183 165224214 -88032369 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 2327 85 0 0 chr2 165224238 165224521 -88032062 - AluSx SINE Alu -29 283 1 2169 173 96 19 chr2 165224679 165225146 -88031437 - MLT1D LTR MaLR 0 505 3 2192 117 0 3 chr2 165225668 165225967 -88030616 - AluSx SINE Alu -9 303 6 619 274 90 67 chr2 165225985 165226276 -88030307 + L1MC4a LINE L1 5299 5579 -542 455 151 0 94 chr2 165226276 165226382 -88030201 - L1PB4 LINE L1 -3 6153 6058 619 274 90 67 chr2 165226382 165226629 -88029954 + L1MC4a LINE L1 5579 5819 -302 1793 108 4 0 chr2 165226650 165226891 -88029692 + AluSp SINE Alu 61 302 -11 2490 59 7 0 chr2 165226893 165227196 -88029387 + AluY SINE Alu 1 305 -6 1442 219 17 37 chr2 165227295 165227372 -88029211 + L1ME1 LINE L1 5818 5895 -271 2125 90 0 4 chr2 165227372 165227639 -88028944 + AluSx SINE Alu 11 276 -36 1442 219 17 37 chr2 165227639 165227912 -88028671 + L1ME1 LINE L1 5895 6161 -5 341 43 21 0 chr2 165228273 165228320 -88028263 + (TG)n Simple_repeat Simple_repeat 1 48 0 244 289 182 32 chr2 165228492 165228679 -88027904 - L2 LINE L2 -1756 1558 1344 2129 113 3 3 chr2 165228804 165229105 -88027478 + AluSg SINE Alu 6 306 -4 226 219 156 0 chr2 165229202 165229266 -88027317 - Charlie8 DNA MER1_type -2246 171 98 275 27 54 0 chr2 165229276 165229339 -88027244 + AluY SINE Alu 244 308 0 835 144 0 0 chr2 165229571 165229689 -88026894 + FLAM_C SINE Alu 1 118 -15 2011 128 7 4 chr2 165229698 165230003 -88026580 - AluSx SINE Alu 0 306 1 30 27 0 0 chr2 165230003 165230040 -88026543 + AT_rich Low_complexity Low_complexity 1 37 0 2058 121 3 0 chr2 165230162 165230451 -88026132 - AluSp SINE Alu -10 303 14 702 173 0 24 chr2 165230665 165230792 -88025791 + FLAM_C SINE Alu 2 125 -18 202 176 0 0 chr2 165231249 165231283 -88025300 + MER5A DNA MER1_type 140 173 -16 1590 158 0 77 chr2 165231612 165231922 -88024661 - AluJo SINE Alu -16 296 11 1648 91 4 4 chr2 165232047 165232278 -88024305 + MER50 LTR ERV1 2 232 -502 329 181 42 28 chr2 165232280 165232352 -88024231 + MER50 LTR ERV1 435 507 -227 942 144 88 0 chr2 165232464 165232624 -88023959 + MER50 LTR ERV1 561 734 0 6998 56 9 51 chr2 165233211 165234084 -88022499 - L1PA7 LINE L1 -6 6148 5294 2244 105 0 3 chr2 165234084 165234380 -88022203 - AluY SINE Alu -16 295 1 6998 56 9 51 chr2 165234380 165234580 -88022003 - L1PA7 LINE L1 -860 5294 5087 2123 139 0 7 chr2 165234586 165234888 -88021695 + AluSx SINE Alu 1 300 -12 384 22 0 0 chr2 165235741 165235786 -88020797 + (CA)n Simple_repeat Simple_repeat 1 45 0 1972 193 70 31 chr2 165235994 165236225 -88020358 - MLT1D LTR MaLR -3 502 282 2332 104 7 0 chr2 165236225 165236533 -88020050 - AluSx SINE Alu -2 310 1 1972 193 70 31 chr2 165236533 165236784 -88019799 - MLT1D LTR MaLR -223 282 1 928 142 117 0 chr2 165237119 165237281 -88019302 - L1MCa LINE L1 -6001 425 245 498 228 8 41 chr2 165237396 165237519 -88019064 - MER20B DNA MER1_type -647 136 18 426 158 146 0 chr2 165238630 165238712 -88017871 - MIR SINE MIR -98 164 71 16934 84 7 16 chr2 165240003 165242296 -88014287 + HERVE LTR ERV1 2892 5165 -2648 2214 193 91 30 chr2 165242296 165244598 -88011985 - SATR1 Satellite Satellite -2 2442 1 1239 212 234 31 chr2 165244639 165245803 -88010780 - SATR1 Satellite Satellite -1 1400 1 1419 99 27 18 chr2 165245805 165246027 -88010556 - AluSq SINE Alu -89 224 1 677 239 46 0 chr2 165247936 165248133 -88008450 + MER6B DNA MER2_type 5 210 0 396 260 19 45 chr2 165248236 165248390 -88008193 - MER5B DNA MER1_type -4 174 25 1062 133 8 0 chr2 165248575 165248894 -88007689 - AluSp SINE Alu -30 283 1 852 171 17 28 chr2 165249084 165249265 -88007318 + L1MA4 LINE L1 5771 5949 -351 1496 122 4 4 chr2 165249266 165249496 -88007087 + AluSx SINE Alu 1 230 -82 592 241 285 4 chr2 165249524 165249903 -88006680 - SATR1 Satellite Satellite -2 485 1 2307 190 123 12 chr2 165249941 165251352 -88005231 - SATR1 Satellite Satellite -1 1567 1 233 217 14 49 chr2 165251526 165251669 -88004914 + (TTA)n Simple_repeat Simple_repeat 1 138 0 1164 219 164 16 chr2 165251689 165252068 -88004515 + SATR1 Satellite Satellite 12 446 -24 1812 198 65 50 chr2 165252123 165252582 -88004001 - SATR1 Satellite Satellite -1 469 4 2306 171 103 7 chr2 165252615 165253272 -88003311 - SATR1 Satellite Satellite 0 719 1 823 208 0 42 chr2 165253443 165253635 -88002948 + LTR2 LTR ERV1 266 449 0 525 122 0 0 chr2 165253640 165253714 -88002869 - tRNA-Glu-GAG tRNA tRNA 0 75 2 29241 89 13 10 chr2 165253715 165257639 -87998944 + HERVE LTR ERV1 647 4580 -3233 915 206 275 30 chr2 165257739 165258186 -87998397 - SATR1 Satellite Satellite -1 556 1 1394 109 27 14 chr2 165258188 165258409 -87998174 - AluSq SINE Alu -89 224 1 700 234 46 0 chr2 165260283 165260480 -87996103 + MER6B DNA MER2_type 5 210 0 379 230 97 9 chr2 165260585 165260698 -87995885 - MER5B DNA MER1_type -6 172 50 287 244 94 62 chr2 165260885 165260896 -87995687 - HsTC2 DNA Tc2 -103 1795 1786 1852 142 0 25 chr2 165260896 165261213 -87995370 - AluSp SINE Alu -4 309 1 287 244 94 62 chr2 165261213 165261361 -87995222 - HsTC2 DNA Tc2 -112 1786 1631 1329 216 3 72 chr2 165261402 165261582 -87995001 + L1MA4 LINE L1 5770 5910 -390 1600 151 7 4 chr2 165261582 165261861 -87994722 + AluSx SINE Alu 1 280 -32 1329 216 3 72 chr2 165261861 165262068 -87994515 + L1MA4 LINE L1 5910 6130 -170 1886 134 3 3 chr2 165262147 165262454 -87994129 - AluSp SINE Alu -4 309 3 3019 232 25 55 chr2 165262501 165263493 -87993090 + L1MB3 LINE L1 4818 5838 -345 1899 129 7 3 chr2 165263493 165263802 -87992781 + AluSx SINE Alu 1 310 -2 3019 232 25 55 chr2 165263802 165263936 -87992647 + L1MB3 LINE L1 5838 5974 -209 1840 138 7 0 chr2 165263936 165264227 -87992356 + AluSx SINE Alu 12 304 -8 3019 232 25 55 chr2 165264227 165264473 -87992110 + L1MB3 LINE L1 5974 6151 -32 189 132 0 0 chr2 165265256 165265294 -87991289 + (ATG)n Simple_repeat Simple_repeat 3 40 0 309 327 65 33 chr2 165265313 165265527 -87991056 - MIR SINE MIR -10 252 32 2041 98 10 7 chr2 165265921 165266227 -87990356 + AluSg SINE Alu 1 307 -3 265 319 44 26 chr2 165266611 165266724 -87989859 + L2 LINE L2 3158 3272 0 2062 93 0 10 chr2 165266789 165267091 -87989492 - AluSc SINE Alu -10 299 1 2307 171 112 6 chr2 165268173 165268892 -87987691 + SATR1 Satellite Satellite 1 795 -2 1341 243 137 27 chr2 165268924 165269585 -87986998 + SATR1 Satellite Satellite 1 733 -144 592 241 285 4 chr2 165269623 165270002 -87986581 + SATR1 Satellite Satellite 1 485 -94 1503 130 0 4 chr2 165270030 165270261 -87986322 - AluSx SINE Alu -82 230 1 852 171 17 28 chr2 165270262 165270443 -87986140 - L1MA4 LINE L1 -351 5949 5771 1279 168 20 114 chr2 165270633 165270984 -87985599 + AluYb8 SINE Alu 1 318 0 380 266 19 45 chr2 165271139 165271293 -87985290 + MER5B DNA MER1_type 25 174 -4 647 237 45 5 chr2 165271396 165271594 -87984989 - MER6B DNA MER2_type 0 210 5 1419 99 27 18 chr2 165273503 165273725 -87982858 + AluSq SINE Alu 1 224 -89 1987 190 165 64 chr2 165273754 165275647 -87980936 + SATR1 Satellite Satellite 1 2084 -1 2324 200 111 11 chr2 165275686 165277298 -87979285 + SATR1 Satellite Satellite 1 1773 -20 29289 97 11 11 chr2 165277298 165281356 -87975227 - HERVE LTR ERV1 -2648 5165 1108 252 209 11 73 chr2 165281426 165281617 -87974966 + (TAA)n Simple_repeat Simple_repeat 1 179 0 1959 217 210 15 chr2 165281715 165282879 -87973704 + SATR1 Satellite Satellite 1 1390 -3 961 225 249 43 chr2 165282900 165283741 -87972842 + SATR1 Satellite Satellite 1 1014 -4 961 221 193 29 chr2 165283789 165284198 -87972385 + SATR1 Satellite Satellite 1 475 -404 1769 107 48 38 chr2 165285074 165285365 -87971218 - AluSx SINE Alu -18 294 1 2077 238 85 6 chr2 165285448 165285978 -87970605 + MER97b DNA MER1_type? 3 574 -479 1359 66 0 16 chr2 165286259 165286441 -87970142 - AluYb8 SINE Alu -139 179 1 761 89 27 18 chr2 165286444 165286556 -87970027 + Tigger1 DNA MER2_type 2248 2360 -58 637 238 8 0 chr2 165286620 165286746 -87969837 + FLAM_A SINE Alu 1 127 -6 1346 101 0 0 chr2 165286823 165287002 -87969581 - AluSx SINE Alu -131 181 3 1694 187 7 0 chr2 165287046 165287346 -87969237 + AluJo SINE Alu 1 302 -10 218 297 20 59 chr2 165287390 165287491 -87969092 - MIR SINE MIR -78 184 88 1132 149 111 76 chr2 165287726 165288013 -87968570 - MLT1A2 LTR MaLR -9 365 69 971 140 27 104 chr2 165288013 165288180 -87968403 + Tigger2a DNA MER2_type 1 179 -2529 351 0 0 0 chr2 165288180 165288219 -87968364 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 2012 103 0 0 chr2 165288224 165288497 -87968086 - AluSg SINE Alu -37 273 1 971 140 27 104 chr2 165288497 165288544 -87968039 + Tigger2a DNA MER2_type 183 204 -230 186 43 0 0 chr2 165288544 165288567 -87968016 + (TTC)n Simple_repeat Simple_repeat 2 24 0 805 186 0 0 chr2 165288568 165288692 -87967891 - FLAM_C SINE Alu -17 126 3 1427 145 17 21 chr2 165288694 165288935 -87967648 + Tigger2a DNA MER2_type 205 444 0 406 159 14 0 chr2 165288935 165289004 -87967579 - MLT1A2 LTR MaLR -304 70 1 485 240 154 17 chr2 165289039 165289272 -87967311 + MER110A LTR ERV1 184 448 -20 25 0 0 0 chr2 165289282 165289307 -87967276 + AT_rich Low_complexity Low_complexity 1 25 0 180 0 0 0 chr2 165289366 165289386 -87967197 + (A)n Simple_repeat Simple_repeat 1 20 0 1708 168 10 0 chr2 165289390 165289687 -87966896 + AluJb SINE Alu 1 300 -12 1285 178 115 32 chr2 165290017 165290040 -87966543 - MLT1A1 LTR MaLR -25 340 320 1383 159 55 38 chr2 165290040 165290329 -87966254 + AluJb SINE Alu 1 294 -18 1285 178 115 32 chr2 165290329 165290619 -87965964 - MLT1A1 LTR MaLR -45 320 1 270 156 41 115 chr2 165290619 165290741 -87965842 + HAL1 LINE L1 2286 2398 -109 247 32 0 0 chr2 165290931 165290962 -87965621 + (TTTC)n Simple_repeat Simple_repeat 2 72 0 1208 174 10 0 chr2 165290962 165291160 -87965423 - AluJo SINE Alu -30 282 86 2195 114 7 0 chr2 165291234 165291531 -87965052 - AluSp SINE Alu -12 301 3 834 145 76 0 chr2 165291549 165291680 -87964903 - FRAM SINE Alu -15 161 21 612 287 7 52 chr2 165291802 165292074 -87964509 + MER52A LTR ERV1 1496 1755 0 1600 127 4 28 chr2 165292171 165292423 -87964160 + L1PA16 LINE L1 5912 6157 -9 217 179 60 0 chr2 165292424 165292491 -87964092 + (TA)n Simple_repeat Simple_repeat 2 72 0 926 254 122 21 chr2 165292583 165292910 -87963673 + MLT1I LTR MaLR 48 407 -2 217 294 0 0 chr2 165293036 165293087 -87963496 - L2 LINE L2 0 3272 3222 2172 115 0 7 chr2 165293114 165293440 -87963143 + AluSx SINE Alu 1 324 0 693 103 0 62 chr2 165293616 165293839 -87962744 + AluSx SINE Alu 1 296 -13 1525 156 62 82 chr2 165293840 165294257 -87962326 - LTR37A LTR ERV1 0 426 18 232 233 225 58 chr2 165294328 165294448 -87962135 - MIR SINE MIR -3 259 120 407 234 80 29 chr2 165294543 165294680 -87961903 - L1ME1 LINE L1 -18 6148 6005 2178 234 16 24 chr2 165294689 165295189 -87961394 - LTR31 LTR ERV1 -15 604 109 239 266 0 0 chr2 165295298 165295362 -87961221 - L1ME1 LINE L1 -211 5955 5892 * 872 158 85 69 chr2 165295358 165295577 -87961006 - L1MD2 LINE L1 -3 6356 6131 1800 172 3 7 chr2 165295577 165295880 -87960703 - AluJb SINE Alu -10 302 1 872 158 85 69 chr2 165295880 165295906 -87960677 - L1MD2 LINE L1 -228 6131 6107 337 250 16 113 chr2 165296020 165296144 -87960439 - MER52A LTR ERV1 -300 1455 1344 2150 208 24 57 chr2 165296169 165296845 -87959738 - LTR27 LTR ERV1 -141 495 2 240 167 136 15 chr2 165297911 165297977 -87958606 + MIR SINE MIR 168 241 -21 28 48 0 0 chr2 165298017 165298059 -87958524 + AT_rich Low_complexity Low_complexity 1 42 0 1076 153 11 17 chr2 165298497 165298673 -87957910 - L1MC1 LINE L1 0 6333 6159 1196 199 4 13 chr2 165298673 165298899 -87957684 - AluJo SINE Alu -88 224 1 1790 159 106 0 chr2 165298901 165299222 -87957361 - L1MC1 LINE L1 -2310 5685 5331 1513 171 148 41 chr2 165299222 165299615 -87956968 - MSTB2 LTR MaLR 0 457 23 1786 213 27 18 chr2 165299634 165300023 -87956560 - L1MC1 LINE L1 -812 5334 4939 203 0 0 36 chr2 165300023 165300051 -87956532 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 1786 213 27 18 chr2 165300051 165300102 -87956481 - L1MC1 LINE L1 -1207 4939 4890 1777 87 4 21 chr2 165300104 165300345 -87956238 + AluY SINE Alu 1 237 -74 783 221 104 8 chr2 165300540 165300780 -87955803 + MER97c DNA MER1_type? 827 1089 -1 230 69 0 0 chr2 165301826 165301855 -87954728 + MER53 DNA DNA 1 29 -160 768 266 23 5 chr2 165301930 165302148 -87954435 + LTR33 LTR ERVL 293 514 -7 198 191 0 0 chr2 165302498 165302545 -87954038 + (TG)n Simple_repeat Simple_repeat 2 48 0 1492 97 24 0 chr2 165302620 165302852 -87953731 + L1PA10 LINE L1 5937 6173 0 2130 132 0 10 chr2 165302857 165303167 -87953416 + AluSx SINE Alu 6 312 0 4453 252 79 57 chr2 165303437 165304644 -87951939 + HAL1 LINE L1 35 1213 -1294 2204 194 96 35 chr2 165304644 165304908 -87951675 - MLT2B1 LTR ERVL -1 519 273 1874 142 48 0 chr2 165304908 165305197 -87951386 - AluJb SINE Alu -9 303 1 2204 194 96 35 chr2 165305197 165305421 -87951162 - MLT2B1 LTR ERVL -247 273 1 4453 252 79 57 chr2 165305421 165305671 -87950912 + HAL1 LINE L1 1213 1456 -1051 1949 150 7 0 chr2 165305671 165305964 -87950619 + AluSx SINE Alu 1 295 -17 4453 252 79 57 chr2 165305964 165306394 -87950189 + HAL1 LINE L1 1456 1966 -541 1523 141 0 29 chr2 165306560 165306802 -87949781 - AluJo SINE Alu -77 235 1 22 0 0 0 chr2 165307111 165307133 -87949450 + AT_rich Low_complexity Low_complexity 1 22 0 490 315 65 36 chr2 165307531 165307810 -87948773 + L2 LINE L2 2445 2731 -583 662 195 65 8 chr2 165307826 165307949 -87948634 - FLAM_A SINE Alu -2 131 2 2233 102 3 0 chr2 165307959 165308253 -87948330 - AluSx SINE Alu -17 295 1 307 147 44 15 chr2 165308264 165308332 -87948251 - L1MB7 LINE L1 0 6184 6115 2382 176 164 17 chr2 165308370 165308961 -87947622 - L1ME1 LINE L1 -149 6017 5340 894 171 19 0 chr2 165308965 165309123 -87947460 - AluJb SINE Alu -16 296 136 1351 149 0 31 chr2 165311778 165312000 -87944583 - AluJo SINE Alu -13 299 85 2110 144 0 0 chr2 165312421 165312720 -87943863 - AluSx SINE Alu -3 309 11 392 219 187 0 chr2 165312866 165312989 -87943594 - MIR SINE MIR -26 236 91 369 284 103 0 chr2 165313043 165313159 -87943424 - MIR SINE MIR -101 161 34 3263 97 0 0 chr2 165313262 165313694 -87942889 + HERVE LTR ERV1 4743 5174 -2639 2341 172 109 6 chr2 165313695 165315675 -87940908 - SATR1 Satellite Satellite -2 2183 1 324 264 64 36 chr2 165315740 165315880 -87940703 + MIR SINE MIR 86 229 -33 2697 217 27 23 chr2 165315904 165315921 -87940662 + L1ME2 LINE L1 5174 5189 -975 2018 120 43 3 chr2 165315921 165316220 -87940363 + AluSq SINE Alu 1 311 -2 2697 217 27 23 chr2 165316220 165316280 -87940303 + L1ME2 LINE L1 5189 5247 -917 1589 172 23 33 chr2 165316280 165316582 -87940001 + AluJo SINE Alu 1 299 -13 2697 217 27 23 chr2 165316582 165317232 -87939351 + L1ME2 LINE L1 5247 5905 -259 722 203 20 0 chr2 165317289 165317437 -87939146 + L1ME2 LINE L1 5997 6147 -17 2118 96 11 0 chr2 165317445 165317751 -87938832 + AluSp SINE Alu 1 309 0 1402 232 141 3 chr2 165318512 165318895 -87937688 - MER110 LTR ERV1 -1 490 55 407 208 10 30 chr2 165319136 165319237 -87937346 + MIR SINE MIR 118 216 -46 2016 135 0 0 chr2 165319680 165319988 -87936595 - AluJb SINE Alu 0 308 1 347 285 45 121 chr2 165320997 165321327 -87935256 + L2 LINE L2 2887 3191 -81 394 315 23 0 chr2 165321625 165321755 -87934828 + MIR3 SINE MIR 73 205 -3 1107 168 0 0 chr2 165322060 165322233 -87934350 - AluSq SINE Alu -39 274 102 312 0 0 0 chr2 165322233 165322267 -87934316 + U2 snRNA snRNA 1 34 -154 780 191 0 0 chr2 165322267 165322382 -87934201 - AluSq SINE Alu -196 116 2 5906 212 39 71 chr2 165322383 165322424 -87934159 - L1M4 LINE L1 -1441 4705 4664 288 0 0 0 chr2 165322424 165322456 -87934127 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 5906 212 39 71 chr2 165322456 165323032 -87933551 - L1M4 LINE L1 -1482 4664 4071 2382 97 3 0 chr2 165323032 165323343 -87933240 - AluSp SINE Alu -1 312 1 5906 212 39 71 chr2 165323343 165324528 -87932055 - L1M4 LINE L1 -2075 4071 2960 199 284 34 57 chr2 165324730 165324818 -87931765 - MER5A DNA MER1_type -76 113 28 217 266 31 16 chr2 165324746 165324810 -87931773 + MER5B DNA MER1_type 89 153 -25 352 341 196 19 chr2 165324867 165325081 -87931502 + L2 LINE L2 2923 3174 -98 2768 205 2 34 chr2 165325092 165325377 -87931206 - MLT1F LTR MaLR 0 542 249 2062 180 105 10 chr2 165325377 165325766 -87930817 + MSTB LTR MaLR 1 426 0 2768 205 2 34 chr2 165325766 165325989 -87930594 - MLT1F LTR MaLR -293 249 51 2225 162 21 0 chr2 165325989 165326328 -87930255 + MER7A DNA MER2_type 3 346 0 2768 205 2 34 chr2 165326328 165326378 -87930205 - MLT1F LTR MaLR -491 51 1 1005 245 58 80 chr2 165326469 165326918 -87929665 + MLT1K LTR MaLR 139 577 -11 643 258 69 26 chr2 165328054 165328192 -87928391 + MIR SINE MIR 19 172 -90 603 214 8 56 chr2 165328192 165328318 -87928265 + FLAM_A SINE Alu 1 120 -13 643 258 69 26 chr2 165328318 165328412 -87928171 + MIR SINE MIR 172 261 -1 22 0 0 0 chr2 165328501 165328523 -87928060 + AT_rich Low_complexity Low_complexity 1 22 0 1243 129 0 6 chr2 165328922 165329100 -87927483 - AluJb SINE Alu -135 177 1 1901 131 14 3 chr2 165330341 165330631 -87925952 - AluSx SINE Alu -18 294 2 719 238 33 22 chr2 165331266 165331447 -87925136 - U2 snRNA snRNA -3 185 3 2259 108 0 0 chr2 165331778 165332073 -87924510 + AluSx SINE Alu 1 295 -17 504 245 28 21 chr2 165332074 165332217 -87924366 - L1MC5 LINE L1 -36 7925 7782 820 141 8 23 chr2 165332244 165332372 -87924211 - FLAM_C SINE Alu -3 140 15 366 172 200 48 chr2 165332387 165332532 -87924051 - L1MC5 LINE L1 -262 7699 7533 1036 282 43 35 chr2 165332542 165332889 -87923694 - MLT1I LTR MaLR 0 409 60 491 243 116 16 chr2 165332930 165333119 -87923464 - L1MC5 LINE L1 -440 7521 7314 1610 236 68 68 chr2 165333231 165333773 -87922810 - MLT1F LTR MaLR 0 542 1 2362 80 10 3 chr2 165333810 165334109 -87922474 + AluSg SINE Alu 1 301 -9 24 32 0 0 chr2 165334258 165334289 -87922294 + AT_rich Low_complexity Low_complexity 1 31 0 753 242 22 63 chr2 165334330 165334449 -87922134 + L1M3 LINE L1 5506 5628 -548 526 205 137 0 chr2 165334449 165334566 -87922017 - FLAM_A SINE Alu 0 133 1 753 242 22 63 chr2 165334566 165334739 -87921844 + L1M3 LINE L1 5628 5781 -395 1294 124 14 24 chr2 165334739 165334949 -87921634 + MER2 DNA MER2_type 2 209 -136 9403 137 14 17 chr2 165335088 165335614 -87920969 + Tigger1 DNA MER2_type 1 527 -1891 2307 70 0 0 chr2 165335614 165335887 -87920696 + AluSc SINE Alu 27 299 -10 9403 137 14 17 chr2 165335887 165336607 -87919976 + Tigger1 DNA MER2_type 527 1245 -1173 2178 113 7 0 chr2 165336607 165336899 -87919684 - AluSq SINE Alu -17 296 3 9403 137 14 17 chr2 165336899 165337133 -87919450 + Tigger1 DNA MER2_type 1245 1478 -940 328 257 9 37 chr2 165337301 165337410 -87919173 + L1ME4a LINE L1 5926 6031 -90 1011 104 0 8 chr2 165337417 165337551 -87919032 - FLAM_C SINE Alu 0 133 1 1746 211 200 25 chr2 165337555 165337653 -87918930 + MLT1F1 LTR MaLR 1 80 -487 333 0 0 0 chr2 165337653 165337690 -87918893 + (TG)n Simple_repeat Simple_repeat 1 37 0 1746 211 200 25 chr2 165337690 165338070 -87918513 + MLT1F1 LTR MaLR 80 563 -4 2089 110 27 13 chr2 165338105 165338406 -87918177 - AluSg SINE Alu -5 305 1 1564 174 24 20 chr2 165338485 165338779 -87917804 + AluJo SINE Alu 1 295 -17 2248 125 0 0 chr2 165340720 165341017 -87915566 + AluSx SINE Alu 1 297 -15 2373 105 0 3 chr2 165341214 165341528 -87915055 + AluSq SINE Alu 1 313 0 23 68 0 0 chr2 165341542 165341586 -87914997 + AT_rich Low_complexity Low_complexity 1 44 0 21 0 0 0 chr2 165341882 165341903 -87914680 + AT_rich Low_complexity Low_complexity 1 21 0 201 304 152 7 chr2 165342462 165342600 -87913983 + MIR SINE MIR 90 247 -15 910 283 103 19 chr2 165342611 165342978 -87913605 + MLT1I LTR MaLR 3 400 -9 735 160 64 0 chr2 165343160 165343285 -87913298 - FRAM SINE Alu -33 143 11 2286 97 16 3 chr2 165343625 165343933 -87912650 - AluSp SINE Alu -1 312 1 841 248 109 74 chr2 165343981 165344465 -87912118 - MLT1J LTR MaLR -8 503 3 582 240 17 57 chr2 165344469 165344644 -87911939 - MIR SINE MIR -54 208 41 234 62 0 0 chr2 165345357 165345389 -87911194 + (TG)n Simple_repeat Simple_repeat 1 32 0 1809 156 23 26 chr2 165345476 165345784 -87910799 - AluJo SINE Alu -5 307 1 2498 83 3 0 chr2 165345790 165346102 -87910481 - AluSp SINE Alu 0 313 1 424 290 105 42 chr2 165346208 165346625 -87909958 - L1ME4a LINE L1 -169 5952 5507 675 278 78 32 chr2 165346631 165346982 -87909601 + LTR50 LTR ERVL 1 346 -177 460 207 93 21 chr2 165346986 165347126 -87909457 + LTR33A LTR ERVL 365 514 -9 25 90 0 0 chr2 165347236 165347303 -87909280 + AT_rich Low_complexity Low_complexity 1 67 0 1113 227 60 113 chr2 165347361 165347565 -87909018 + MLT1D LTR MaLR 1 214 -291 771 228 95 0 chr2 165347565 165347723 -87908860 + FAM SINE Alu 2 174 -1 1113 227 60 113 chr2 165347723 165348051 -87908532 + MLT1D LTR MaLR 214 505 0 221 0 0 33 chr2 165348251 165348281 -87908302 + (TTCTG)n Simple_repeat Simple_repeat 4 32 0 2049 120 23 3 chr2 165348503 165348802 -87907781 - AluJb SINE Alu -7 305 1 451 104 13 26 chr2 165348835 165348912 -87907671 + SVA Other Other 488 563 -823 22 35 0 0 chr2 165348993 165349022 -87907561 + AT_rich Low_complexity Low_complexity 1 29 0 499 316 41 62 chr2 165349250 165349686 -87906897 + MLT1K LTR MaLR 141 567 -21 241 36 0 0 chr2 165350363 165350418 -87906165 - AluY SINE Alu 0 309 255 203 263 28 117 chr2 165352471 165352650 -87903933 + L3 LINE CR1 901 1063 -514 460 161 12 0 chr2 165352785 165352866 -87903717 + AluJ/FLAM SINE Alu 4 85 -227 278 281 68 52 chr2 165353057 165353274 -87903309 + MIR SINE MIR 3 224 -38 964 146 24 24 chr2 165353845 165354009 -87902574 - AluJb SINE Alu -20 292 129 410 274 87 117 chr2 165354268 165354414 -87902169 - LTR67 LTR ERVL 0 557 408 2031 145 30 0 chr2 165354414 165354711 -87901872 + AluJb SINE Alu 1 306 -6 410 274 87 117 chr2 165354711 165355104 -87901479 - LTR67 LTR ERVL -149 408 34 870 225 6 11 chr2 165355207 165355385 -87901198 - MER45A DNA AcHobo 0 178 2 1440 181 25 3 chr2 165355661 165355943 -87900640 - L1MB4 LINE L1 -155 6025 5738 2473 77 0 0 chr2 165355956 165356255 -87900328 - AluY SINE Alu -12 299 1 1003 82 0 0 chr2 165356339 165356461 -87900122 - AluSg SINE Alu -187 123 2 1006 161 0 0 chr2 165356522 165356703 -87899880 - AluSg/x SINE Alu 0 299 119 2249 119 3 0 chr2 165356818 165357121 -87899462 - AluSq SINE Alu -9 304 1 458 247 0 0 chr2 165357124 165357213 -87899370 - AluJ/FLAM SINE Alu -222 90 2 279 298 39 19 chr2 165358618 165358722 -87897861 - L2 LINE L2 -4 3309 3204 204 346 80 49 chr2 165358720 165358882 -87897701 - L2 LINE L2 -235 3037 2871 * 21 71 0 0 chr2 165359004 165359046 -87897537 + AT_rich Low_complexity Low_complexity 1 42 0 1390 194 51 31 chr2 165359976 165360269 -87896314 - AluJo SINE Alu -13 299 1 1992 120 14 3 chr2 165360433 165360717 -87895866 + AluSx SINE Alu 1 287 -25 22 0 0 0 chr2 165360724 165360746 -87895837 + AT_rich Low_complexity Low_complexity 1 22 0 596 246 149 58 chr2 165360793 165361175 -87895408 + MLT1F LTR MaLR 120 536 -6 230 171 0 0 chr2 165361221 165361256 -87895327 - L2 LINE L2 -96 3217 3183 2642 48 0 3 chr2 165361428 165361737 -87894846 - AluY SINE Alu -3 308 1 1303 169 55 19 chr2 165361813 165362120 -87894463 - L1MD1 LINE L1 0 6242 5925 797 171 79 6 chr2 165362124 165362288 -87894295 + AluJb SINE Alu 137 312 0 2472 55 3 0 chr2 165362288 165362612 -87893971 + AluY SINE Alu 1 325 0 1848 160 49 9 chr2 165362616 165362947 -87893636 - L1MD1 LINE L1 -302 5940 5593 213 39 0 0 chr2 165362947 165362973 -87893610 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1848 160 49 9 chr2 165362973 165362991 -87893592 - L1MD1 LINE L1 -649 5593 5577 1202 162 131 35 chr2 165362996 165363255 -87893328 + AluJo SINE Alu 11 294 -18 467 214 0 0 chr2 165363280 165363364 -87893219 - L1MD1 LINE L1 -651 5591 5508 392 294 95 23 chr2 165364986 165365216 -87891367 - MIR SINE MIR 0 262 19 22 70 0 0 chr2 165365915 165365958 -87890625 + AT_rich Low_complexity Low_complexity 1 43 0 26 30 0 0 chr2 165366700 165366733 -87889850 + AT_rich Low_complexity Low_complexity 1 33 0 35 54 0 0 chr2 165368962 165369018 -87887565 + GC_rich Low_complexity Low_complexity 1 56 0 21 36 0 0 chr2 165369609 165369637 -87886946 + GC_rich Low_complexity Low_complexity 1 28 0 204 282 97 40 chr2 165372293 165372417 -87884166 - MIR3 SINE MIR -76 132 2 971 201 60 116 chr2 165374782 165374908 -87881675 + MER2 DNA MER2_type 9 141 -204 2296 103 3 7 chr2 165374908 165375209 -87881374 - AluSx SINE Alu -12 300 1 1658 141 7 67 chr2 165375218 165375515 -87881068 - AluJb SINE Alu -21 291 13 971 201 60 116 chr2 165375515 165375630 -87880953 + MER2 DNA MER2_type 149 237 -108 217 51 51 0 chr2 165375630 165375669 -87880914 + (TATTG)n Simple_repeat Simple_repeat 5 45 0 971 201 60 116 chr2 165375669 165375769 -87880814 + MER2 DNA MER2_type 237 341 -4 513 313 12 0 chr2 165375791 165375954 -87880629 + MLT1L LTR MaLR 50 214 -401 726 147 17 0 chr2 165376093 165376209 -87880374 - FLAM_C SINE Alu -24 119 2 300 213 93 0 chr2 165376223 165376298 -87880285 + MLT1L LTR MaLR 474 555 -60 2313 122 0 0 chr2 165376298 165376610 -87879973 - AluJb SINE Alu 0 312 1 947 225 212 16 chr2 165376634 165377007 -87879576 + Charlie7 DNA MER1_type 29 474 -2138 2255 112 0 0 chr2 165377075 165377381 -87879202 + AluSx SINE Alu 1 306 0 22 80 0 0 chr2 165377528 165377578 -87879005 + AT_rich Low_complexity Low_complexity 1 50 0 1015 175 0 0 chr2 165377614 165377780 -87878803 - FRAM SINE Alu 0 166 1 26 0 0 27 chr2 165377780 165377795 -87878788 + AT_rich Low_complexity Low_complexity 1 15 -21 2130 130 0 0 chr2 165377795 165378087 -87878496 - AluSx SINE Alu -20 292 1 26 0 0 27 chr2 165378087 165378108 -87878475 + AT_rich Low_complexity Low_complexity 15 36 0 314 194 0 16 chr2 165378148 165378210 -87878373 + MLT1L LTR MaLR 555 615 0 1778 190 0 16 chr2 165379683 165379999 -87876584 + AluJb SINE Alu 1 311 -1 576 228 24 42 chr2 165380591 165380758 -87875825 + MER103 DNA DNA 1 164 -2 231 242 91 38 chr2 165380836 165380968 -87875615 - L1MC5 LINE L1 -191 7770 7632 2563 57 3 0 chr2 165380971 165381268 -87875315 + AluY SINE Alu 1 298 -13 355 289 86 0 chr2 165381440 165381568 -87875015 - L1MC5 LINE L1 -534 7427 7289 1365 191 11 36 chr2 165381666 165381944 -87874639 + AluJo SINE Alu 18 288 -24 468 0 0 0 chr2 165381968 165382020 -87874563 + (TA)n Simple_repeat Simple_repeat 1 52 0 246 264 242 22 chr2 165382825 165383007 -87873576 + MIR SINE MIR 5 226 -36 1681 171 6 54 chr2 165383057 165383399 -87873184 - AluJo SINE Alu 0 327 1 2633 43 0 3 chr2 165383661 165383964 -87872619 + AluY SINE Alu 1 302 -9 234 62 0 0 chr2 165385141 165385173 -87871410 + (GGA)n Simple_repeat Simple_repeat 3 34 0 246 317 106 39 chr2 165385244 165385604 -87870979 - L2 LINE L2 -337 2977 2594 262 239 45 23 chr2 165385679 165385767 -87870816 - MIR SINE MIR -62 200 111 1722 169 44 102 chr2 165385834 165386118 -87870465 - LTR54B LTR ERV1 -2 496 256 2171 127 3 0 chr2 165386118 165386417 -87870166 - AluSg SINE Alu -10 300 1 1722 169 44 102 chr2 165386417 165386659 -87869924 - LTR54B LTR ERV1 -242 256 1 331 287 25 25 chr2 165386968 165387090 -87869493 - MER5A DNA MER1_type -22 167 46 1375 118 5 50 chr2 165387489 165387709 -87868874 + AluSg/x SINE Alu 93 302 -10 2148 124 0 7 chr2 165387720 165388011 -87868572 + AluJb SINE Alu 1 289 -23 245 353 66 0 chr2 165388130 165388252 -87868331 + MIR SINE MIR 18 147 -115 2252 87 3 13 chr2 165388517 165388826 -87867757 + AluSx SINE Alu 1 306 -6 227 308 0 0 chr2 165389131 165389196 -87867387 - L2 LINE L2 0 3313 3249 261 209 0 0 chr2 165389704 165389747 -87866836 + AluJ/monomer SINE Alu 2 44 -264 1907 162 3 16 chr2 165389800 165390108 -87866475 + AluJo SINE Alu 1 304 -8 465 270 156 9 chr2 165390267 165390395 -87866188 + MIR SINE MIR 2 110 -152 1984 89 13 70 chr2 165390395 165390708 -87865875 - AluSg SINE Alu -15 295 1 465 270 156 9 chr2 165390708 165390790 -87865793 + MIR SINE MIR 110 243 -19 272 336 99 48 chr2 165390848 165391202 -87865381 - L2 LINE L2 -73 3199 2828 1873 137 0 69 chr2 165391263 165391598 -87864985 + AluJb SINE Alu 1 312 0 343 286 17 0 chr2 165391787 165391906 -87864677 + L1MC3 LINE L1 5761 5881 -1927 2279 84 27 3 chr2 165391944 165392241 -87864342 + AluY SINE Alu 1 304 -7 2046 139 0 7 chr2 165392553 165392855 -87863728 + AluJb SINE Alu 1 300 -12 2349 62 0 58 chr2 165392982 165393290 -87863293 - AluY SINE Alu -19 292 3 1339 169 50 0 chr2 165393724 165393966 -87862617 - AluJb SINE Alu 0 312 59 235 88 0 0 chr2 165394008 165394042 -87862541 - HY3 scRNA scRNA -1 100 67 22 56 0 0 chr2 165394103 165394139 -87862444 + AT_rich Low_complexity Low_complexity 1 36 0 1559 169 24 14 chr2 165394744 165395040 -87861543 - AluJo SINE Alu -10 302 4 1801 151 10 33 chr2 165396541 165396845 -87859738 + AluJb SINE Alu 1 297 -15 2724 223 149 22 chr2 165397481 165398281 -87858302 + L1MC3 LINE L1 6190 7090 -695 345 225 32 20 chr2 165398288 165398392 -87858191 + MLT1F1 LTR MaLR 35 138 -442 441 165 12 12 chr2 165398392 165398477 -87858106 + L1MD3 LINE L1 7413 7497 -498 1440 127 73 33 chr2 165398502 165398747 -87857836 + AluJo SINE Alu 54 308 -4 673 194 24 0 chr2 165400420 165400544 -87856039 - FLAM_C SINE Alu -5 128 2 631 243 81 5 chr2 165401346 165401531 -87855052 - MIR SINE MIR -23 239 41 956 138 66 0 chr2 165401847 165402014 -87854569 + L1MB3 LINE L1 6004 6181 -2 568 306 86 9 chr2 165402081 165402303 -87854280 - MIR SINE MIR -12 250 12 22 35 0 0 chr2 165403314 165403343 -87853240 + AT_rich Low_complexity Low_complexity 1 29 0 280 187 53 27 chr2 165403883 165403958 -87852625 + L2 LINE L2 3217 3293 -20 297 258 0 0 chr2 165403967 165404033 -87852550 - MIR SINE MIR -125 137 72 21 36 0 0 chr2 165404896 165404924 -87851659 + AT_rich Low_complexity Low_complexity 1 28 0 188 119 0 48 chr2 165405078 165405120 -87851463 + (TATG)n Simple_repeat Simple_repeat 3 42 0 3369 118 12 23 chr2 165405223 165405740 -87850843 - MER9 LTR ERVK 0 511 1 1880 164 10 0 chr2 165405781 165406074 -87850509 + AluJb SINE Alu 1 296 -16 33 25 0 0 chr2 165406096 165406136 -87850447 + AT_rich Low_complexity Low_complexity 1 40 0 208 186 151 81 chr2 165406142 165406228 -87850355 + MIR SINE MIR 161 252 -10 2086 131 3 7 chr2 165406485 165406791 -87849792 + AluSx SINE Alu 1 305 -7 1716 135 50 130 chr2 165407495 165407611 -87848972 + Tigger3(Golem) DNA MER2_type 1 125 -2903 2378 94 3 0 chr2 165407611 165407918 -87848665 - AluSp SINE Alu -5 308 1 1716 135 50 130 chr2 165407918 165408179 -87848404 + Tigger3(Golem) DNA MER2_type 125 3028 0 4362 129 34 7 chr2 165409659 165410373 -87846210 + L1MA5 LINE L1 5568 6300 0 230 287 28 46 chr2 165411237 165411345 -87845238 + MIR3 SINE MIR 82 187 -21 303 146 0 0 chr2 165411368 165411423 -87845160 - Alu SINE Alu 0 302 248 246 283 109 14 chr2 165411514 165411652 -87844931 - MIR SINE MIR -54 208 58 1065 158 0 18 chr2 165412000 165412171 -87844412 - FRAM SINE Alu -7 169 2 1963 153 14 83 chr2 165414226 165414599 -87841984 - MLT1B LTR MaLR 0 390 -7 2098 143 22 25 chr2 165414599 165414964 -87841619 - THE1B LTR MaLR 0 364 1 11436 107 11 2 chr2 165414964 165416529 -87840054 - THE1B-int LTR MaLR 0 1580 1 2018 124 19 62 chr2 165416529 165416900 -87839683 - THE1A LTR MaLR 0 355 1 1963 153 14 83 chr2 165416900 165416943 -87839640 - MLT1B LTR MaLR -345 45 1 2454 80 0 0 chr2 165417047 165417346 -87839237 - AluY SINE Alu -12 299 1 21 0 0 0 chr2 165418165 165418186 -87838397 + AT_rich Low_complexity Low_complexity 1 21 0 1349 60 0 0 chr2 165418192 165418360 -87838223 + L1PA8 LINE L1 6005 6172 0 1538 160 32 7 chr2 165418948 165419230 -87837353 - L1MB4 LINE L1 -6 6174 5886 746 230 20 56 chr2 165419415 165419667 -87836916 - MIR SINE MIR 0 262 20 511 249 55 36 chr2 165419805 165419970 -87836613 - Charlie8 DNA MER1_type -2226 191 24 587 91 0 0 chr2 165420129 165420217 -87836366 - Alu SINE Alu 0 312 225 720 127 42 8 chr2 165420219 165420337 -87836246 - AluJb SINE Alu -138 174 53 2105 112 13 39 chr2 165420586 165420898 -87835685 - AluSx SINE Alu -8 304 1 200 310 0 28 chr2 165421008 165421079 -87835504 - MIR SINE MIR 0 262 194 895 188 0 36 chr2 165421923 165422119 -87834464 + FAM SINE Alu 1 54 0 2061 130 27 0 chr2 165422936 165423229 -87833354 + AluSx SINE Alu 1 301 -11 180 333 159 0 chr2 165423409 165423478 -87833105 - L2 LINE L2 -48 3224 3145 1735 176 7 7 chr2 165423814 165424115 -87832468 - AluJb SINE Alu -11 301 1 2163 120 0 17 chr2 165424159 165424459 -87832124 + AluSx SINE Alu 1 295 -17 257 98 0 0 chr2 165424602 165424643 -87831940 - L1MA9 LINE L1 -38 6274 6234 2707 164 50 47 chr2 165424670 165424948 -87831635 + MER7C DNA MER2_type 46 321 -2707 2331 109 0 0 chr2 165424948 165425241 -87831342 + AluSx SINE Alu 5 297 -15 2707 164 50 47 chr2 165425241 165425517 -87831066 + MER7C DNA MER2_type 321 602 0 337 233 0 0 chr2 165425523 165425596 -87830987 - L1MA9 LINE L1 -71 6241 6169 841 108 36 12 chr2 165425597 165425763 -87830820 + CT-rich Low_complexity Low_complexity 4 173 0 679 219 12 18 chr2 165425763 165425927 -87830656 - L1MA9 LINE L1 -147 6165 6003 265 265 152 8 chr2 165425931 165426063 -87830520 - L1MC5 LINE L1 -187 7774 7624 1803 164 10 3 chr2 165426402 165426707 -87829876 - AluJo SINE Alu -5 307 1 1033 140 37 0 chr2 165426970 165427134 -87829449 - MSTC LTR MaLR -12 416 247 3615 232 29 60 chr2 165427147 165427512 -87829071 - MSTD-int LTR MaLR -802 933 558 743 126 0 0 chr2 165427512 165427615 -87828968 - U6 snRNA snRNA -2 105 3 3615 232 29 60 chr2 165427615 165428211 -87828372 - MSTD-int LTR MaLR -1177 558 2 883 203 134 78 chr2 165428214 165428588 -87827995 - MSTD LTR MaLR -1 395 1 2137 139 0 0 chr2 165428600 165428895 -87827688 - AluSq SINE Alu -18 295 1 2592 156 30 76 chr2 165429012 165429256 -87827327 - L1MB1 LINE L1 -5 6163 5909 1353 183 59 22 chr2 165429256 165429529 -87827054 - AluJo SINE Alu -28 284 2 2592 156 30 76 chr2 165429529 165429860 -87826723 - L1MB1 LINE L1 -259 5909 5615 1489 210 21 4 chr2 165430051 165430332 -87826251 - AluJo SINE Alu -23 289 4 716 183 0 0 chr2 165430347 165430462 -87826121 - FLAM_C SINE Alu -27 116 2 220 218 30 30 chr2 165434423 165434524 -87822059 + (CA)n Simple_repeat Simple_repeat 1 101 0 434 236 140 25 chr2 165434943 165435100 -87821483 - MER5B DNA MER1_type -1 177 3 24251 57 7 3 chr2 165436905 165440772 -87815811 - L1PA6 LINE L1 -11 6143 2266 10813 128 9 21 chr2 165440773 165442463 -87814120 - L1PA6 LINE L1 -4476 1670 1 181 315 19 0 chr2 165444172 165444226 -87812357 + L2 LINE L2 3211 3265 -7 1621 127 53 46 chr2 165444693 165444976 -87811607 + AluJo SINE Alu 2 286 -26 1684 112 116 8 chr2 165445712 165445979 -87810604 + AluSx SINE Alu 1 296 -16 396 306 93 81 chr2 165446954 165447125 -87809458 + L2 LINE L2 1868 2036 -1278 1964 146 0 16 chr2 165447125 165447440 -87809143 - AluJb SINE Alu -2 310 1 396 306 93 81 chr2 165447440 165447870 -87808713 + L2 LINE L2 2036 2476 -838 491 168 32 11 chr2 165447953 165448048 -87808535 + MER4A LTR ERV1 2 98 -566 1837 108 32 28 chr2 165448048 165448392 -87808191 + MER4A LTR ERV1 261 664 0 240 325 83 30 chr2 165448495 165448664 -87807919 - MIR SINE MIR -34 228 51 905 128 0 0 chr2 165449343 165449468 -87807115 - FLAM_C SINE Alu -18 125 1 351 226 71 0 chr2 165450043 165450127 -87806456 + MER5A DNA MER1_type 79 168 -21 1253 184 139 38 chr2 165450673 165450940 -87805643 - AluJo SINE Alu -8 294 1 482 208 50 0 chr2 165451142 165451243 -87805340 + MIR SINE MIR 83 188 -74 23 0 0 0 chr2 165451523 165451546 -87805037 + AT_rich Low_complexity Low_complexity 1 23 0 381 22 0 0 chr2 165452202 165452248 -87804335 + (TG)n Simple_repeat Simple_repeat 2 47 0 835 167 0 83 chr2 165453021 165453189 -87803394 + MSTD LTR MaLR 243 396 0 * 1321 220 122 17 chr2 165453189 165453606 -87802977 + Charlie4a DNA MER1_type 38 498 -10 615 222 169 0 chr2 165454741 165454930 -87801653 + MIR SINE MIR 27 247 -15 227 255 32 75 chr2 165454937 165455031 -87801552 + MER5B DNA MER1_type 17 106 -72 186 200 80 20 chr2 165455433 165455483 -87801100 - MIR3 SINE MIR -7 201 149 192 324 56 0 chr2 165456031 165456102 -87800481 + MIR SINE MIR 18 92 -170 234 0 0 0 chr2 165456429 165456455 -87800128 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 2248 102 0 13 chr2 165456859 165457172 -87799411 - AluY SINE Alu -2 309 1 659 138 147 0 chr2 165457656 165457772 -87798811 - FLAM_C SINE Alu 0 133 1 184 363 0 12 chr2 165458041 165458121 -87798462 + MIR SINE MIR 43 121 -87 243 0 0 0 chr2 165459373 165459400 -87797183 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1449 200 22 35 chr2 165459778 165460093 -87796490 + AluJb SINE Alu 1 311 -1 378 0 0 0 chr2 165460446 165460488 -87796095 + (TG)n Simple_repeat Simple_repeat 1 42 0 220 226 48 12 chr2 165460488 165460572 -87796011 + T-rich Low_complexity Low_complexity 5 91 0 191 265 122 20 chr2 165461178 165461276 -87795307 - L2 LINE L2 -10 3262 3155 329 226 29 49 chr2 165461817 165461919 -87794664 + LTR48B LTR ERV1 1 100 -544 * 2005 188 92 12 chr2 165461893 165462308 -87794275 + MER39 LTR ERV1 260 707 0 2399 103 3 0 chr2 165462513 165462825 -87793758 + AluSq SINE Alu 1 313 0 2886 19 0 0 chr2 165463243 165463557 -87793026 + AluYb8 SINE Alu 1 314 -4 370 288 90 0 chr2 165465093 165465204 -87791379 + MIR SINE MIR 33 153 -55 249 267 27 13 chr2 165465432 165465507 -87791076 + C-rich Low_complexity Low_complexity 5 80 0 1810 139 3 30 chr2 165466682 165466984 -87789599 + AluJo SINE Alu 1 294 -18 1995 119 7 11 chr2 165469310 165469596 -87786987 - AluSx SINE Alu -26 286 2 189 344 137 38 chr2 165469894 165470077 -87786506 - L3b LINE CR1 -4 1579 1379 284 239 104 60 chr2 165470217 165470322 -87786261 + L1M4 LINE L1 4327 4426 -1720 1624 142 35 76 chr2 165470322 165470638 -87785945 - AluJb SINE Alu -9 303 1 284 239 104 60 chr2 165470638 165470807 -87785776 + L1M4 LINE L1 4426 4619 -1527 1870 132 62 10 chr2 165470807 165471111 -87785472 - L1MC1 LINE L1 0 6333 6014 284 239 104 60 chr2 165471111 165471153 -87785430 + L1M4 LINE L1 4619 4658 -1488 283 253 12 24 chr2 165471201 165471284 -87785299 - LTR67 LTR ERVL -379 178 97 2074 139 0 7 chr2 165472528 165472838 -87783745 - AluSx SINE Alu -4 308 1 236 355 0 21 chr2 165472940 165473033 -87783550 + MIR SINE MIR 20 110 -152 1065 60 0 0 chr2 165473202 165473336 -87783247 + L1PA4 LINE L1 6022 6155 0 1412 198 83 52 chr2 165475268 165475631 -87780952 - MLT1A2 LTR MaLR 0 374 1 1689 187 0 35 chr2 165475843 165476158 -87780425 + AluJb SINE Alu 2 305 -7 441 303 125 29 chr2 165476252 165476707 -87779876 - L1ME LINE L1 -314 5807 5309 212 317 142 33 chr2 165477244 165477364 -87779219 - MIR3 SINE MIR -21 187 55 1008 188 11 0 chr2 165477634 165477815 -87778768 - AluJo SINE Alu -31 281 99 790 279 136 10 chr2 165478236 165478627 -87777956 - L1MC/D LINE L1 -2007 5801 5362 571 206 284 0 chr2 165478628 165478783 -87777800 + MIR SINE MIR 37 235 -27 770 203 0 15 chr2 165479753 165479886 -87776697 - FLAM_A SINE Alu -2 131 1 189 0 0 0 chr2 165479903 165479924 -87776659 + (T)n Simple_repeat Simple_repeat 1 21 0 336 318 45 0 chr2 165479994 165480082 -87776501 - MIR SINE MIR -150 112 21 290 238 25 25 chr2 165480102 165480182 -87776401 + MIR SINE MIR 116 195 -67 207 152 0 0 chr2 165482583 165482629 -87773954 + (CCCTG)n Simple_repeat Simple_repeat 3 48 0 263 250 0 0 chr2 165482946 165483002 -87773581 + MIR SINE MIR 207 262 0 1992 136 3 40 chr2 165483488 165483811 -87772772 - AluSx SINE Alu -1 311 1 22 35 0 0 chr2 165483811 165483840 -87772743 + AT_rich Low_complexity Low_complexity 1 29 0 2275 98 0 0 chr2 165484526 165484821 -87771762 + AluSg SINE Alu 1 295 -15 557 271 32 13 chr2 165485404 165485559 -87771024 + MIR SINE MIR 2 159 -103 1776 151 58 0 chr2 165485631 165485943 -87770640 + MSTB2 LTR MaLR 122 451 -6 224 216 0 95 chr2 165485949 165486023 -87770560 + MIR SINE MIR 196 262 0 2206 160 118 3 chr2 165486050 165486432 -87770151 - MSTB LTR MaLR 0 426 1 21 36 0 0 chr2 165487222 165487250 -87769333 + AT_rich Low_complexity Low_complexity 1 28 0 229 311 60 40 chr2 165487858 165488009 -87768574 - HAL1b LINE L1 -738 610 457 914 212 0 0 chr2 165488051 165488230 -87768353 - AluJb SINE Alu -1 311 133 1938 225 56 9 chr2 165488279 165488724 -87767859 + MLT1C LTR MaLR 2 467 0 1574 97 65 5 chr2 165489133 165489350 -87767233 - MER30 DNA MER1_type 0 230 1 192 179 0 0 chr2 165490766 165490805 -87765778 + (CATATA)n Simple_repeat Simple_repeat 5 43 0 297 327 36 0 chr2 165490956 165491066 -87765517 + MER5B DNA MER1_type 3 116 -62 808 217 29 24 chr2 165491737 165491944 -87764639 + MIR SINE MIR 28 235 -27 341 257 14 0 chr2 165493299 165493373 -87763210 + MER58 DNA MER1_type 2345 2419 -1 2205 125 0 6 chr2 165495486 165495798 -87760785 - AluSg SINE Alu 0 310 1 2406 80 10 0 chr2 165496009 165496309 -87760274 + AluSg SINE Alu 1 303 -7 3036 126 51 38 chr2 165496971 165497519 -87759064 - LTR10A LTR ERV1 -54 555 1 22 35 0 0 chr2 165498514 165498543 -87758040 + AT_rich Low_complexity Low_complexity 1 29 0 2012 155 35 18 chr2 165498683 165499025 -87757558 + MER7A DNA MER2_type 1 346 0 228 35 0 0 chr2 165500051 165500080 -87756503 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2207 154 85 40 chr2 165500083 165500532 -87756051 + MER31A LTR ERV1 12 480 -5 22 0 0 0 chr2 165501417 165501439 -87755144 + AT_rich Low_complexity Low_complexity 1 22 0 1867 134 6 51 chr2 165502832 165503145 -87753438 - AluJb SINE Alu -13 299 1 2431 86 3 0 chr2 165503264 165503568 -87753015 - AluY SINE Alu -6 305 1 637 126 63 0 chr2 165503633 165503744 -87752839 - L1MB2 LINE L1 -1 6170 6053 548 262 24 53 chr2 165503751 165503957 -87752626 - L1ME LINE L1 -421 5700 5501 245 312 51 36 chr2 165504210 165504348 -87752235 - MIR3 SINE MIR -2 206 67 621 274 0 30 chr2 165504878 165505046 -87751537 - MER5B DNA MER1_type -15 163 1 1814 135 7 53 chr2 165505109 165505413 -87751170 - AluJb SINE Alu -22 290 1 2673 58 0 0 chr2 165505533 165505844 -87750739 - AluY SINE Alu 0 311 1 630 127 64 0 chr2 165505908 165506018 -87750565 - L1MB2 LINE L1 -2 6169 6053 234 273 13 39 chr2 165506025 165506102 -87750481 - L1ME LINE L1 -421 5700 5626 2938 182 45 72 chr2 165506650 165507562 -87749021 - L1MB7 LINE L1 0 6184 5174 2041 119 3 7 chr2 165507562 165507877 -87748706 - AluSx SINE Alu 0 314 1 2938 182 45 72 chr2 165507877 165508172 -87748411 - L1MB7 LINE L1 -1010 5174 4873 845 217 44 30 chr2 165509891 165510094 -87746489 + MLT1A2 LTR MaLR 1 206 -168 3915 174 35 8 chr2 165510099 165510805 -87745778 + Tigger7 DNA MER2_type 25 749 -1738 571 159 65 28 chr2 165510803 165510910 -87745673 + Tigger7 DNA MER2_type 2381 2491 0 * 562 167 87 29 chr2 165510910 165511032 -87745551 + MLT1A2 LTR MaLR 211 340 -25 870 134 0 8 chr2 165511039 165511166 -87745417 - AluJb SINE Alu -186 126 1 1995 142 0 28 chr2 165512789 165513107 -87743476 - AluSx SINE Alu -3 309 1 1727 160 6 49 chr2 165513107 165513432 -87743151 - AluJo SINE Alu -1 311 1 1515 143 39 80 chr2 165513508 165513794 -87742789 - AluJb SINE Alu -23 289 16 248 253 102 48 chr2 165513898 165514064 -87742519 + MIR SINE MIR 40 214 -48 545 231 16 8 chr2 165514269 165514390 -87742193 + FLAM_A SINE Alu 1 122 -11 209 316 44 44 chr2 165515528 165515642 -87740941 - L2 LINE L2 -20 3252 3139 375 60 0 0 chr2 165515723 165515773 -87740810 + (TG)n Simple_repeat Simple_repeat 2 51 0 2233 113 0 7 chr2 165516696 165517023 -87739560 + AluSg SINE Alu 1 310 0 1204 188 10 0 chr2 165517074 165517282 -87739301 - MER58A DNA MER1_type -8 216 7 233 301 49 32 chr2 165517384 165517507 -87739076 - MIR SINE MIR -111 151 27 1490 184 61 56 chr2 165517778 165517947 -87738636 - L1MC3 LINE L1 0 7785 7618 2505 60 0 3 chr2 165517947 165518247 -87738336 - AluY SINE Alu -12 299 1 1490 184 61 56 chr2 165518247 165518473 -87738110 - L1MC3 LINE L1 -167 7618 7388 1213 177 29 150 chr2 165518521 165518973 -87737610 - L1MC3 LINE L1 -351 7434 7038 25 0 0 0 chr2 165520909 165520934 -87735649 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr2 165521135 165521160 -87735423 + AT_rich Low_complexity Low_complexity 1 25 0 1656 144 27 19 chr2 165521196 165521452 -87735131 - AluJb SINE Alu -54 258 1 487 215 156 7 chr2 165521482 165521617 -87734966 - MLT1D LTR MaLR -350 155 1 385 261 85 76 chr2 165521635 165521846 -87734737 - MLT1J LTR MaLR -201 310 98 1882 134 36 0 chr2 165521899 165522174 -87734409 - AluSq SINE Alu -27 286 2 311 185 46 85 chr2 165522292 165522422 -87734161 - LTR37A LTR ERV1 -264 162 38 2015 153 0 0 chr2 165522488 165522789 -87733794 - AluJb SINE Alu -11 301 1 906 215 129 22 chr2 165523006 165523317 -87733266 - L1ME1 LINE L1 -15 6151 5808 733 210 18 0 chr2 165523315 165523485 -87733098 - L1M3 LINE L1 -573 5610 5434 * 2052 114 50 0 chr2 165524627 165524907 -87731676 + AluSx SINE Alu 1 294 -18 386 137 14 0 chr2 165524939 165525012 -87731571 - MER5A DNA MER1_type -96 93 20 1628 157 30 40 chr2 165525294 165525594 -87730989 - AluJb SINE Alu -15 297 1 1441 190 110 116 chr2 165525876 165526155 -87730428 - MLT1E2 LTR MaLR 0 626 347 2245 78 18 3 chr2 165526155 165526439 -87730144 - AluSx SINE Alu -24 288 1 1441 190 110 116 chr2 165526439 165526790 -87729793 - MLT1E2 LTR MaLR -279 347 3 1356 113 35 1 chr2 165527676 165528432 -87728151 + L1PA10 LINE L1 5304 6168 0 180 77 0 0 chr2 165530678 165530704 -87725879 + (TTG)n Simple_repeat Simple_repeat 2 27 0 578 121 143 0 chr2 165531301 165531392 -87725191 - FRAM SINE Alu -69 107 4 609 238 119 58 chr2 165531394 165531755 -87724828 - HAL1 LINE L1 -1583 924 542 203 167 0 0 chr2 165532053 165532089 -87724494 + C-rich Low_complexity Low_complexity 3 38 0 289 321 82 33 chr2 165532609 165532793 -87723790 + MIR SINE MIR 11 203 -59 1814 130 25 35 chr2 165533019 165533344 -87723239 - AluSx SINE Alu 0 322 1 1162 162 0 0 chr2 165533895 165534074 -87722509 - FRAM SINE Alu -2 174 1 1730 160 13 27 chr2 165534859 165535023 -87721560 - AluJb SINE Alu -16 296 136 2327 87 3 10 chr2 165535023 165535333 -87721250 - AluSg SINE Alu -2 308 1 1730 160 13 27 chr2 165535333 165535468 -87721115 - AluJb SINE Alu -176 136 1 2395 202 110 23 chr2 165535476 165536099 -87720484 - L1MB8 LINE L1 0 6178 5514 432 0 0 0 chr2 165536553 165536601 -87719982 + (TG)n Simple_repeat Simple_repeat 1 48 0 685 216 0 0 chr2 165539636 165539761 -87716822 + FLAM_C SINE Alu 1 125 -18 1705 203 3 0 chr2 165540491 165540797 -87715786 + AluJo SINE Alu 1 307 -5 2343 122 0 0 chr2 165541237 165541541 -87715042 - AluSq SINE Alu -9 304 1 1204 188 50 13 chr2 165541603 165541842 -87714741 - MLT1A1 LTR MaLR 0 365 118 3660 189 68 57 chr2 165542745 165543332 -87713251 + Charlie1a DNA MER1_type 1 605 -2156 2315 110 3 0 chr2 165543332 165543642 -87712941 + AluSx SINE Alu 1 311 -1 3660 189 68 57 chr2 165543642 165544008 -87712575 + Charlie1a DNA MER1_type 605 965 -490 758 117 17 8 chr2 165544009 165544129 -87712454 + FLAM_C SINE Alu 23 143 0 1451 167 102 75 chr2 165544137 165544616 -87711967 + Charlie1a DNA MER1_type 960 1451 -4 2097 109 0 65 chr2 165544925 165545247 -87711336 - AluSx SINE Alu -11 301 1 195 304 143 62 chr2 165545937 165546098 -87710485 - MIR SINE MIR -46 216 43 2357 87 3 0 chr2 165547081 165547391 -87709192 - AluSq SINE Alu -2 311 1 341 309 32 16 chr2 165551638 165551761 -87704822 + MIR3 SINE MIR 33 157 -51 241 425 18 0 chr2 165551764 165551877 -87704706 + MER5B DNA MER1_type 1 115 -63 1152 162 40 47 chr2 165552383 165552636 -87703947 - L1MB8 LINE L1 -11 6167 5917 1465 172 25 47 chr2 165553015 165553334 -87703249 - AluJo SINE Alu 0 312 1 212 287 115 46 chr2 165556987 165557074 -87699509 - L2 LINE L2 -1 3271 3179 1748 147 3 17 chr2 165558624 165558924 -87697659 + AluJo SINE Alu 1 296 -16 259 300 25 12 chr2 165558978 165559058 -87697525 + MIR SINE MIR 158 238 -24 1657 124 30 8 chr2 165559741 165560008 -87696575 + AluJb SINE Alu 28 300 -12 243 0 0 0 chr2 165560242 165560269 -87696314 + (TG)n Simple_repeat Simple_repeat 1 27 0 * 396 0 0 0 chr2 165560268 165560312 -87696271 + (GA)n Simple_repeat Simple_repeat 1 44 0 742 197 0 15 chr2 165560425 165560557 -87696026 + FLAM_A SINE Alu 1 130 -3 196 225 25 0 chr2 165562121 165562161 -87694422 + L2 LINE L2 3216 3256 -16 305 200 36 0 chr2 165562435 165562490 -87694093 - L2 LINE L2 0 3272 3216 437 294 7 15 chr2 165564186 165564322 -87692261 + MIR3 SINE MIR 73 207 -1 1097 196 46 1 chr2 165564742 165565039 -87691544 - MER2 DNA MER2_type 0 345 2 2050 113 3 10 chr2 165568850 165569152 -87687431 - AluSx SINE Alu -12 300 1 2196 108 7 0 chr2 165570261 165570557 -87686026 + AluSq SINE Alu 1 298 -15 1446 151 34 0 chr2 165571900 165572139 -87684444 + AluJo SINE Alu 1 247 -65 2154 108 0 0 chr2 165572140 165572437 -87684146 + AluSx SINE Alu 16 312 0 414 227 136 68 chr2 165573687 165573871 -87682712 + MER112 DNA MER1_type 3 206 -54 2023 127 0 7 chr2 165573871 165574179 -87682404 + AluSx SINE Alu 1 306 -6 414 227 136 68 chr2 165574179 165574214 -87682369 + MER112 DNA MER1_type 206 237 -23 243 225 64 56 chr2 165574445 165574552 -87682031 + MIR SINE MIR 37 150 -83 23 33 0 0 chr2 165575234 165575264 -87681319 + AT_rich Low_complexity Low_complexity 1 30 0 2219 99 0 0 chr2 165577458 165577760 -87678823 - AluSx SINE Alu -10 302 1 598 214 76 27 chr2 165578302 165578526 -87678057 + L1ME3A LINE L1 5931 6165 -5 406 185 12 0 chr2 165581134 165581215 -87675368 + MER96 DNA MER1_type? 1 82 -93 2256 66 7 7 chr2 165581844 165582147 -87674436 - AluY SINE Alu -8 303 1 2072 93 10 30 chr2 165582469 165582771 -87673812 + AluSq SINE Alu 1 296 -17 950 239 158 38 chr2 165582778 165583392 -87673191 - L1MC5 LINE L1 -98 7863 7176 605 270 93 19 chr2 165584576 165584791 -87671792 + MIR SINE MIR 16 246 -16 234 355 159 0 chr2 165586127 165586234 -87670349 - L2 LINE L2 0 3313 3190 343 246 30 75 chr2 165586709 165586843 -87669740 - L1MC5 LINE L1 -435 7526 7399 622 118 157 0 chr2 165586843 165586945 -87669638 - FRAM SINE Alu -49 127 10 1243 151 0 5 chr2 165587004 165587203 -87669380 + AluSg/x SINE Alu 92 289 -21 237 323 52 21 chr2 165588113 165588209 -87668374 - MIR SINE MIR -88 174 76 282 290 81 59 chr2 165589544 165589730 -87666853 + MIR SINE MIR 64 253 -9 370 272 122 7 chr2 165590089 165590236 -87666347 - MIR SINE MIR -22 240 77 521 261 111 0 chr2 165590293 165590446 -87666137 + MER5B DNA MER1_type 6 175 -3 238 287 7 4 chr2 165590703 165590782 -87665801 - MIR SINE MIR -79 129 50 2272 103 0 0 chr2 165591090 165591402 -87665181 - AluSq SINE Alu -1 312 1 280 278 181 30 chr2 165591887 165592153 -87664430 - L2 LINE L2 -199 3114 2809 819 151 0 0 chr2 165592873 165592999 -87663584 - FLAM_C SINE Alu -17 126 1 526 190 116 16 chr2 165593054 165593175 -87663408 + MER5A DNA MER1_type 1 133 -56 2041 115 3 3 chr2 165593188 165593500 -87663083 - AluSx SINE Alu 0 312 1 2708 174 38 5 chr2 165593516 165594068 -87662515 - L1MB2 LINE L1 -2 6169 5600 2322 76 7 0 chr2 165594068 165594371 -87662212 - AluSc SINE Alu -4 305 1 933 163 6 6 chr2 165594395 165594561 -87662022 - FAM SINE Alu -7 42 1 449 106 26 18 chr2 165594568 165594656 -87661927 - L1MB2 LINE L1 -554 5614 5529 290 196 20 0 chr2 165594659 165594710 -87661873 + MER5A DNA MER1_type 138 189 0 537 272 48 20 chr2 165595475 165595622 -87660961 + MIR SINE MIR 35 185 -77 1868 144 17 0 chr2 165595678 165595970 -87660613 - AluSx SINE Alu -15 297 1 225 0 0 0 chr2 165598155 165598180 -87658403 + (CA)n Simple_repeat Simple_repeat 2 26 0 1726 208 86 47 chr2 165598406 165598892 -87657691 - MLT1D LTR MaLR 0 505 1 210 263 74 63 chr2 165600734 165600829 -87655754 + MIR SINE MIR 2 97 -165 201 235 88 29 chr2 165600835 165600903 -87655680 - MER5A DNA MER1_type -75 114 43 793 248 44 9 chr2 165601210 165601404 -87655179 - MLT1E LTR MaLR -53 514 298 2137 118 0 0 chr2 165603750 165604055 -87652528 - AluSc SINE Alu -4 305 1 1708 147 0 45 chr2 165604115 165604427 -87652156 - AluJb SINE Alu -14 298 1 953 173 99 11 chr2 165604501 165604692 -87651891 + MER3 DNA MER1_type 2 209 0 1598 193 46 21 chr2 165605970 165606296 -87650287 + MER7A DNA MER2_type 1 332 -14 2266 88 7 0 chr2 165607970 165608278 -87648305 + AluSg SINE Alu 1 310 0 436 275 73 28 chr2 165608303 165608481 -87648102 + MIR SINE MIR 77 262 0 515 356 24 24 chr2 165608506 165608753 -87647830 + MIR SINE MIR 15 261 -1 22 0 0 0 chr2 165608771 165608793 -87647790 + AT_rich Low_complexity Low_complexity 1 22 0 1590 162 115 17 chr2 165609341 165609637 -87646946 - MER7A DNA MER2_type -23 323 1 607 301 61 29 chr2 165610192 165610504 -87646079 - Tigger8 DNA MER2_type -89 577 256 1974 102 0 21 chr2 165611104 165611418 -87645165 - AluSc SINE Alu 0 311 4 2265 88 3 0 chr2 165611427 165611721 -87644862 - AluSx SINE Alu -17 295 1 2423 145 131 20 chr2 165612996 165613190 -87643393 - MER34C LTR ERV1 0 585 414 2170 99 3 3 chr2 165613190 165613492 -87643091 + AluSg SINE Alu 1 302 -8 2423 145 131 20 chr2 165613492 165613793 -87642790 - MER34C LTR ERV1 -171 414 35 2242 94 3 0 chr2 165614394 165614692 -87641891 + AluSx SINE Alu 1 299 -13 255 225 135 72 chr2 165614840 165614951 -87641632 - MIR3 SINE MIR -53 155 38 362 344 80 24 chr2 165616278 165616691 -87639892 - L1ME3A LINE L1 -229 5941 5506 1042 252 58 33 chr2 165617605 165617996 -87638587 - MLT1G1 LTR MaLR -130 465 19 185 56 0 56 chr2 165618608 165618644 -87637939 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 396 0 0 0 chr2 165620528 165620572 -87636011 + (TG)n Simple_repeat Simple_repeat 2 45 0 2171 101 13 7 chr2 165620844 165621152 -87635431 - AluSg SINE Alu 0 310 1 1519 152 67 7 chr2 165621161 165621430 -87635153 - AluJb SINE Alu -25 287 3 2479 135 65 32 chr2 165621436 165621619 -87634964 - L1MA7 LINE L1 0 6291 6115 1681 115 3 91 chr2 165621619 165621950 -87634633 + AluSq SINE Alu 1 302 -11 2479 135 65 32 chr2 165621950 165622261 -87634322 - L1MA7 LINE L1 -176 6115 5781 3617 174 35 62 chr2 165622785 165623451 -87633132 - L1MB2 LINE L1 0 6171 5536 2168 109 3 0 chr2 165623451 165623755 -87632828 - AluSx SINE Alu -7 305 1 3617 174 35 62 chr2 165623755 165624018 -87632565 - L1MB2 LINE L1 -635 5536 5267 197 228 76 13 chr2 165625192 165625271 -87631312 - MER5B DNA MER1_type -94 84 1 409 267 118 18 chr2 165625538 165625759 -87630824 - MIR SINE MIR -7 255 13 1916 128 42 0 chr2 165626450 165626738 -87629845 + AluSx SINE Alu 1 300 -12 990 232 66 5 chr2 165627258 165627469 -87629114 - MER58A DNA MER1_type 0 224 1 247 281 217 35 chr2 165628996 165629309 -87627274 + L2 LINE L2 1441 1810 -1504 267 231 64 13 chr2 165629908 165629986 -87626597 + MIR SINE MIR 21 102 -160 266 226 71 0 chr2 165632228 165632312 -87624271 - MARNA DNA Mariner -239 347 258 2146 76 59 0 chr2 165634268 165634556 -87622027 + AluSc SINE Alu 1 305 -4 2044 61 90 7 chr2 165634595 165634873 -87621710 + AluY SINE Alu 1 301 -10 1805 144 17 0 chr2 165635060 165635358 -87621225 + AluSg SINE Alu 1 303 -7 1462 126 158 4 chr2 165637201 165637471 -87619112 - AluSq SINE Alu 0 308 1 2058 122 0 3 chr2 165637788 165638084 -87618499 + AluSx SINE Alu 1 295 -17 239 241 0 0 chr2 165638223 165638277 -87618306 - L1MC/D LINE L1 -1883 5925 5872 1071 212 158 45 chr2 165638281 165638742 -87617841 - L1MC/D LINE L1 -428 5750 5306 444 214 0 11 chr2 165638910 165638999 -87617584 - FLAM_A SINE Alu -54 88 1 253 346 81 4 chr2 165639009 165639243 -87617340 - L1MC/D LINE L1 -1127 5019 4768 1561 186 0 17 chr2 165639561 165639857 -87616726 - AluJo SINE Alu -21 291 1 715 147 9 0 chr2 165640193 165640302 -87616281 + AluJb SINE Alu 2 111 -201 2105 174 285 2 chr2 165640507 165641128 -87615455 - L1MB7 LINE L1 -15 6169 5373 904 235 25 15 chr2 165641147 165641347 -87615236 - MIR SINE MIR -42 220 19 232 216 21 62 chr2 165641362 165641459 -87615124 + L1ME1 LINE L1 1026 1118 -5278 1619 142 0 0 chr2 165641883 165642122 -87614461 + AluSx SINE Alu 54 292 -20 1002 107 0 0 chr2 165642258 165642398 -87614185 - AluSg/x SINE Alu -7 305 166 307 248 105 124 chr2 165642398 165642602 -87613981 + L1ME4a LINE L1 5695 5901 -220 2258 75 0 23 chr2 165642602 165642907 -87613676 - AluY SINE Alu -13 298 1 307 248 105 124 chr2 165642907 165642935 -87613648 + L1ME4a LINE L1 5901 5928 -193 1887 109 46 3 chr2 165642935 165643219 -87613364 + AluSq SINE Alu 1 296 -17 307 248 105 124 chr2 165643219 165643291 -87613292 + L1ME4a LINE L1 5928 5994 -127 1207 204 162 8 chr2 165643733 165644159 -87612424 + L1MD2 LINE L1 5850 6242 0 835 212 221 4 chr2 165644170 165644543 -87612040 + L1ME3A LINE L1 5457 5920 -250 737 199 174 25 chr2 165644608 165644884 -87611699 + L1ME1 LINE L1 4019 4335 -1880 484 170 48 18 chr2 165644885 165645043 -87611540 - MER2 DNA MER2_type -4 341 114 2101 222 154 24 chr2 165645111 165645193 -87611390 + L1ME1 LINE L1 4349 4419 -1816 1505 180 10 27 chr2 165645193 165645493 -87611090 + AluJo SINE Alu 1 295 -17 2101 222 154 24 chr2 165645493 165645795 -87610788 + L1ME1 LINE L1 4419 4680 -1555 1840 133 0 20 chr2 165645795 165646097 -87610486 + AluSx SINE Alu 1 296 -16 2101 222 154 24 chr2 165646097 165646701 -87609882 + L1ME1 LINE L1 4680 5204 -1031 2472 70 0 0 chr2 165646701 165646999 -87609584 + AluY SINE Alu 1 298 -13 2101 222 154 24 chr2 165646999 165647431 -87609152 + L1ME1 LINE L1 5204 5965 -270 251 304 14 0 chr2 165647732 165647801 -87608782 - MIR SINE MIR -5 257 188 362 351 92 50 chr2 165647884 165648360 -87608223 + L1ME LINE L1 5396 5891 -299 450 49 0 0 chr2 165648433 165648494 -87608089 + (TA)n Simple_repeat Simple_repeat 1 61 0 1986 142 0 10 chr2 165649167 165649456 -87607127 - AluJb SINE Alu -26 286 1 474 202 223 34 chr2 165650055 165650293 -87606290 + LTR40a LTR ERVL 1 283 -236 2022 125 0 70 chr2 165650334 165650661 -87605922 + AluSx SINE Alu 1 304 -8 315 282 129 12 chr2 165651203 165651373 -87605210 - L2 LINE L2 -2235 1079 890 1925 158 3 16 chr2 165651532 165651843 -87604740 + AluJo SINE Alu 1 307 -5 31 0 0 0 chr2 165652681 165652712 -87603871 + AT_rich Low_complexity Low_complexity 1 31 0 1827 167 0 3 chr2 165654828 165655121 -87601462 + AluJb SINE Alu 1 292 -20 1764 160 7 4 chr2 165655400 165655675 -87600908 + AluJo SINE Alu 2 277 -35 2398 89 0 0 chr2 165655736 165656030 -87600553 + AluY SINE Alu 1 297 -14 192 40 0 0 chr2 165656030 165656055 -87600528 + (TTAAA)n Simple_repeat Simple_repeat 2 26 0 1077 130 65 5 chr2 165656391 165656632 -87599951 + L1M4 LINE L1 5231 5485 -693 693 215 8 0 chr2 165657034 165657164 -87599419 + FLAM_A SINE Alu 1 131 -2 21 0 0 0 chr2 165657220 165657241 -87599342 + AT_rich Low_complexity Low_complexity 1 21 0 1697 179 0 10 chr2 165657562 165657852 -87598731 - AluJb SINE Alu -25 287 1 2245 113 0 3 chr2 165657938 165658238 -87598345 - AluSq SINE Alu -14 299 1 22 0 0 0 chr2 165658451 165658473 -87598110 + AT_rich Low_complexity Low_complexity 1 22 0 2088 130 3 3 chr2 165658927 165659228 -87597355 + AluSx SINE Alu 1 301 -11 1982 144 0 3 chr2 165659583 165659875 -87596708 - AluSx SINE Alu -21 291 1 1993 134 3 14 chr2 165660572 165660863 -87595720 + AluSg SINE Alu 1 288 -22 1183 199 84 16 chr2 165661617 165661938 -87594645 - MER2 DNA MER2_type -2 343 1 547 161 8 51 chr2 165662181 165662299 -87594284 + L1M3e LINE L1 1 113 -6917 450 0 0 0 chr2 165662398 165662448 -87594135 + (TA)n Simple_repeat Simple_repeat 2 51 0 288 0 0 0 chr2 165662448 165662480 -87594103 + (T)n Simple_repeat Simple_repeat 1 32 0 664 279 54 38 chr2 165664410 165664650 -87591933 - MIR SINE MIR -11 251 8 2380 100 0 0 chr2 165665352 165665683 -87590900 + AluSq SINE Alu 1 313 0 665 230 115 0 chr2 165665691 165665830 -87590753 + AluJb SINE Alu 132 286 -26 269 26 26 0 chr2 165665835 165665873 -87590710 + (CA)n Simple_repeat Simple_repeat 1 39 0 1623 151 94 0 chr2 165666000 165666265 -87590318 + AluJb SINE Alu 1 290 -22 225 216 0 0 chr2 165666435 165666486 -87590097 + Charlie1 DNA MER1_type 157 207 -2554 * 602 111 0 20 chr2 165666485 165666584 -87589999 + Charlie1 DNA MER1_type 2432 2528 -233 554 177 39 0 chr2 165666610 165666740 -87589843 + Charlie1 DNA MER1_type 2595 2729 -32 2404 62 0 0 chr2 165666748 165667038 -87589545 - AluY SINE Alu -21 290 1 276 184 0 0 chr2 165667050 165667099 -87589484 + Charlie1 DNA MER1_type 2713 2761 0 1915 158 3 0 chr2 165667320 165667623 -87588960 - AluJo SINE Alu -8 304 1 1905 160 3 22 chr2 165667842 165668154 -87588429 - AluJo SINE Alu -6 306 1 369 267 57 68 chr2 165669398 165669716 -87586867 + L1ME3A LINE L1 1011 1344 -5052 2371 108 0 0 chr2 165669716 165670021 -87586562 - AluSx SINE Alu -7 305 1 369 267 57 68 chr2 165670021 165670199 -87586384 + L1ME3A LINE L1 1344 1522 -4874 784 267 97 19 chr2 165670237 165670649 -87585934 + L1ME3A LINE L1 3874 4317 -1898 536 207 37 83 chr2 165670781 165670998 -87585585 + L1ME3A LINE L1 4549 4755 -1460 456 239 75 52 chr2 165671011 165671224 -87585359 + L1ME3A LINE L1 4832 5049 -1166 1592 274 81 14 chr2 165671418 165672156 -87584427 + L1ME3A LINE L1 5352 6139 -100 2841 142 19 60 chr2 165672536 165673071 -87583512 - LTR64 LTR ERVK 0 513 1 204 270 0 0 chr2 165673710 165673747 -87582836 - L2 LINE L2 -44 3228 3192 2134 125 10 0 chr2 165673967 165674270 -87582313 - AluSx SINE Alu -6 306 1 894 176 0 0 chr2 165674772 165674914 -87581669 + AluJo SINE Alu 1 142 -170 456 270 144 18 chr2 165675435 165675761 -87580822 + HAL1 LINE L1 1022 1388 -1119 315 282 124 38 chr2 165675766 165675975 -87580608 + HAL1 LINE L1 2277 2503 -4 22 0 0 0 chr2 165676190 165676212 -87580371 + AT_rich Low_complexity Low_complexity 1 22 0 2256 102 3 10 chr2 165676606 165676909 -87579674 - AluSg SINE Alu -9 301 1 1516 166 69 11 chr2 165677289 165677566 -87579017 + AluJo SINE Alu 1 293 -19 22 0 0 0 chr2 165678091 165678113 -87578470 + AT_rich Low_complexity Low_complexity 1 22 0 236 279 20 48 chr2 165678947 165679094 -87577489 - L2 LINE L2 -73 3240 3098 791 173 237 15 chr2 165679421 165679689 -87576894 + MER33 DNA MER1_type 1 363 0 2801 0 0 0 chr2 165680960 165681260 -87575323 + AluYa5 SINE Alu 1 300 -11 989 165 13 0 chr2 165681799 165681957 -87574626 - FRAM SINE Alu -20 156 1 2133 106 0 16 chr2 165682240 165682543 -87574040 + AluSq SINE Alu 1 298 -15 2480 61 0 0 chr2 165682748 165683042 -87573541 - AluY SINE Alu -17 294 1 1062 118 34 0 chr2 165683769 165683947 -87572636 - MER1B DNA MER1_type 0 339 156 1115 123 19 0 chr2 165683965 165684119 -87572464 + AluSg/x SINE Alu 126 282 -30 615 135 143 8 chr2 165684230 165684356 -87572227 - MER1B DNA MER1_type -150 147 5 1984 133 13 3 chr2 165684360 165684662 -87571921 - AluSx SINE Alu -7 305 1 535 274 220 30 chr2 165685282 165685732 -87570851 + L2 LINE L2 2759 3305 -8 1651 169 4 4 chr2 165685976 165686254 -87570329 + AluJb SINE Alu 3 280 -32 349 240 118 25 chr2 165688491 165688695 -87567888 - L1ME4a LINE L1 -222 5899 5677 488 308 63 14 chr2 165688725 165688784 -87567799 - L1ME4a LINE L1 -430 5691 5636 2157 115 0 10 chr2 165688784 165689089 -87567494 + AluSx SINE Alu 1 302 -10 488 308 63 14 chr2 165689089 165689250 -87567333 - L1ME4a LINE L1 -485 5636 5460 1905 105 0 4 chr2 165689258 165689516 -87567067 - AluSx SINE Alu -13 299 43 2221 108 0 3 chr2 165689921 165690217 -87566366 + AluSx SINE Alu 1 295 -17 2202 91 10 0 chr2 165690335 165690633 -87565950 - AluY SINE Alu -10 301 1 1247 20 0 0 chr2 165690666 165690812 -87565771 - L1PA4 LINE L1 -3 6152 6007 263 247 27 0 chr2 165691167 165691240 -87565343 + L1ME3A LINE L1 6081 6155 -15 208 51 26 26 chr2 165691814 165691853 -87564730 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1289 129 5 49 chr2 165691855 165692079 -87564504 - AluJo SINE Alu -98 214 1 1341 246 201 4 chr2 165692618 165693110 -87563473 + MLT1G1 LTR MaLR 2 590 -5 213 39 0 0 chr2 165693162 165693188 -87563395 + (T)n Simple_repeat Simple_repeat 1 26 0 7117 5 0 0 chr2 165693188 165694019 -87562564 - L1HS LINE L1 0 6155 5325 * 11955 52 78 4 chr2 165694016 165695686 -87560897 - L1P LINE L1 -4353 1793 1 2049 148 0 19 chr2 165695837 165696155 -87560428 - AluJb SINE Alu 0 312 1 811 132 21 7 chr2 165696157 165696301 -87560282 + MER50 LTR ERV1 566 711 -23 860 172 80 6 chr2 165697712 165697875 -87558708 + FRAM SINE Alu 1 169 -7 454 178 51 34 chr2 165698013 165698131 -87558452 - MER65B LTR ERV1 -403 128 9 202 71 0 89 chr2 165698234 165698290 -87558293 + (TTTTTG)n Simple_repeat Simple_repeat 4 54 0 1613 178 7 7 chr2 165698295 165698582 -87558001 - AluJo SINE Alu -23 289 3 2090 157 42 14 chr2 165698740 165699168 -87557415 + LTR7 LTR ERV1 3 442 -8 3200 193 58 9 chr2 165699175 165699870 -87556713 - L1MB7 LINE L1 -19 6165 5437 * 7153 215 26 28 chr2 165699868 165699991 -87556592 - L1MB7 LINE L1 -996 5150 5028 2230 102 0 0 chr2 165699991 165700284 -87556299 + AluSg SINE Alu 1 293 -17 7153 215 26 28 chr2 165700284 165700988 -87555595 - L1MB7 LINE L1 -1118 5028 4324 3518 145 18 12 chr2 165700988 165701589 -87554994 - MER6A DNA MER2_type 0 605 1 7153 215 26 28 chr2 165701589 165702694 -87553889 - L1MB7 LINE L1 -1822 4324 3220 839 161 15 0 chr2 165702694 165702831 -87553752 + L1MB3 LINE L1 5899 6037 -146 1230 112 73 0 chr2 165702839 165702959 -87553624 - L1MA9 LINE L1 -25 6287 6177 408 104 0 0 chr2 165702959 165703026 -87553557 + (TG)n Simple_repeat Simple_repeat 1 67 0 1230 112 73 0 chr2 165703026 165703111 -87553472 - L1MA9 LINE L1 -135 6177 6067 4702 86 14 5 chr2 165703358 165704011 -87552572 - L1PA11 LINE L1 -1 6173 5515 1613 107 0 0 chr2 165704011 165704217 -87552366 - AluSx SINE Alu -102 210 5 1337 163 14 62 chr2 165704217 165704506 -87552077 - L1PA11 LINE L1 -812 5334 5060 9218 158 31 2 chr2 165704517 165706174 -87550409 + L1P LINE L1 2047 3750 -2396 848 148 0 7 chr2 165706174 165706322 -87550261 + L1MB3 LINE L1 6029 6176 -7 254 118 0 0 chr2 165706325 165706359 -87550224 - U2 snRNA snRNA -153 35 2 2189 109 0 22 chr2 165706359 165706671 -87549912 - AluSx SINE Alu -7 305 1 387 328 132 41 chr2 165706720 165707065 -87549518 - L2 LINE L2 -692 2622 2235 1723 150 126 3 chr2 165707065 165707391 -87549192 - MER47A DNA MER2_type 0 366 1 387 328 132 41 chr2 165707391 165707438 -87549145 - L2 LINE L2 -1079 2235 2194 201 129 0 0 chr2 165707610 165707641 -87548942 + (CAA)n Simple_repeat Simple_repeat 3 33 0 2210 115 0 0 chr2 165707675 165707963 -87548620 - AluSc SINE Alu -21 288 1 2700 218 83 23 chr2 165708372 165709144 -87547439 - L1ME1 LINE L1 -7 6228 5411 428 222 40 40 chr2 165709150 165709326 -87547257 - L1ME1 LINE L1 -860 5355 5180 * 1500 241 32 63 chr2 165709313 165709870 -87546713 - L1ME1 LINE L1 -1841 4374 3835 2189 283 39 23 chr2 165709900 165710852 -87545731 - L1ME1 LINE L1 -5289 965 40 1753 156 25 0 chr2 165710949 165711251 -87545332 + AluJo SINE Alu 1 309 0 202 339 0 16 chr2 165711514 165711576 -87545007 - MER91 DNA MER1_type -79 61 1 1106 221 148 36 chr2 165711601 165712013 -87544570 - MLT1L LTR MaLR -31 584 127 234 346 51 13 chr2 165712564 165712720 -87543863 + MARNA DNA Mariner 320 481 -105 2137 125 0 3 chr2 165713020 165713324 -87543259 - AluSx SINE Alu -9 303 1 6928 57 11 0 chr2 165713915 165715570 -87541013 + L1PA7 LINE L1 4470 6146 -8 380 284 81 55 chr2 165715664 165715819 -87540764 + L1MB8 LINE L1 5512 5662 -516 2344 214 52 12 chr2 165715819 165716338 -87540245 - MLT1F LTR MaLR -2 540 1 380 284 81 55 chr2 165716338 165716492 -87540091 + L1MB8 LINE L1 5662 5829 -349 2561 52 7 0 chr2 165716961 165717268 -87539315 + AluY SINE Alu 1 309 -2 1808 136 30 4 chr2 165717287 165717590 -87538993 + AluSx SINE Alu 12 321 0 196 262 95 60 chr2 165719050 165719134 -87537449 + L2 LINE L2 3146 3232 -40 5074 87 34 3 chr2 165721856 165722593 -87533990 + L1MA2 LINE L1 5545 6304 0 1279 175 76 12 chr2 165722815 165723077 -87533506 - L1MB5 LINE L1 -10 6164 5881 1924 138 28 0 chr2 165723545 165723835 -87532748 - AluSx SINE Alu -14 298 1 2331 90 10 3 chr2 165724071 165724382 -87532201 + AluSq SINE Alu 1 313 0 576 0 0 0 chr2 165725176 165725240 -87531343 + (CA)n Simple_repeat Simple_repeat 2 65 0 319 324 9 19 chr2 165725243 165725348 -87531235 + L2 LINE L2 3164 3267 -5 811 9 43 0 chr2 165725583 165725699 -87530884 + (TA)n Simple_repeat Simple_repeat 1 121 0 2034 138 0 0 chr2 165725699 165725981 -87530602 - AluSx SINE Alu -30 282 1 289 384 130 0 chr2 165727133 165727279 -87529304 + MIR3 SINE MIR 32 196 -12 1047 146 12 6 chr2 165727606 165727770 -87528813 - AluJb SINE Alu -15 297 133 2207 131 0 3 chr2 165728332 165728645 -87527938 + AluSx SINE Alu 1 312 0 1111 278 34 12 chr2 165728937 165729261 -87527322 + MER102b DNA MER1_type 2 332 -9 214 234 0 0 chr2 165729271 165729318 -87527265 + (TG)n Simple_repeat Simple_repeat 2 48 0 1177 194 44 88 chr2 165729328 165729396 -87527187 - MER2 DNA MER2_type -5 340 271 2277 115 0 10 chr2 165729396 165729709 -87526874 + AluSx SINE Alu 1 310 -2 1177 194 44 88 chr2 165729709 165729980 -87526603 - MER2 DNA MER2_type -74 271 16 237 177 16 48 chr2 165729983 165730045 -87526538 - L1MC4 LINE L1 -1327 6715 6656 216 97 0 0 chr2 165730069 165730100 -87526483 + (CATA)n Simple_repeat Simple_repeat 4 34 0 305 274 78 10 chr2 165730743 165730845 -87525738 - MIR SINE MIR -45 217 109 * 2537 287 138 21 chr2 165730844 165731129 -87525454 - L2 LINE L2 -1187 2127 1877 1435 200 17 10 chr2 165731129 165731419 -87525164 + AluJo SINE Alu 1 292 -20 2537 287 138 21 chr2 165731419 165731932 -87524651 - L2 LINE L2 -1437 1877 1426 1866 143 0 31 chr2 165731932 165732225 -87524358 - AluSx SINE Alu -26 286 3 2537 287 138 21 chr2 165732225 165732592 -87523991 - L2 LINE L2 -1888 1426 824 198 316 26 0 chr2 165732605 165732681 -87523902 - L2 LINE L2 -2467 847 770 1476 194 36 16 chr2 165732757 165733061 -87523522 + AluJo SINE Alu 1 310 -2 24 32 0 0 chr2 165733901 165733932 -87522651 + AT_rich Low_complexity Low_complexity 1 31 0 902 206 17 17 chr2 165735450 165735625 -87520958 - FAM SINE Alu 0 175 1 2231 107 13 3 chr2 165735815 165736114 -87520469 + AluSx SINE Alu 1 302 -10 2182 115 17 0 chr2 165736429 165736724 -87519859 + AluSq SINE Alu 1 300 -13 21 57 0 0 chr2 165738518 165738553 -87518030 + AT_rich Low_complexity Low_complexity 1 35 0 487 259 73 121 chr2 165738739 165739094 -87517489 + L2 LINE L2 2930 3267 -5 300 388 85 38 chr2 165739169 165739592 -87516991 + L2 LINE L2 2825 3267 -5 233 255 0 0 chr2 165739706 165739753 -87516830 + L1MA5A LINE L1 533 579 -5269 1634 161 0 14 chr2 165739765 165740045 -87516538 + L1MA5A LINE L1 564 839 -5009 * 2960 156 4 8 chr2 165740038 165740543 -87516040 + L1MA4 LINE L1 5563 6065 -235 * 4647 188 42 39 chr2 165740534 165742634 -87513949 + L1MA5A LINE L1 1804 3910 -2938 1269 188 23 0 chr2 165742648 165742914 -87513669 + L1P LINE L1 4412 4683 -1463 1557 140 5 0 chr2 165742914 165743136 -87513447 - AluJb SINE Alu -89 223 1 6268 133 26 24 chr2 165743136 165744295 -87512288 + L1MA5A LINE L1 5023 6178 -821 2447 83 0 6 chr2 165744295 165744608 -87511975 + AluY SINE Alu 1 311 0 6268 133 26 24 chr2 165744608 165744806 -87511777 + L1MA5A LINE L1 6178 6374 -625 2379 80 13 0 chr2 165744806 165745108 -87511475 + AluSp SINE Alu 1 306 -7 6268 133 26 24 chr2 165745108 165745478 -87511105 + L1MA5A LINE L1 6374 6757 -242 2266 108 0 3 chr2 165745478 165745785 -87510798 + AluSp SINE Alu 1 306 -7 6268 133 26 24 chr2 165745785 165746027 -87510556 + L1MA5A LINE L1 6757 6997 -2 1832 143 55 0 chr2 165746973 165747266 -87509317 + AluSx SINE Alu 1 309 -3 579 261 155 0 chr2 165747785 165747992 -87508591 + MIR SINE MIR 20 258 -4 1810 168 23 52 chr2 165748490 165748587 -87507996 + MER2 DNA MER2_type 7 105 -240 2009 155 0 3 chr2 165748587 165748896 -87507687 + AluJo SINE Alu 1 308 -4 1810 168 23 52 chr2 165748896 165749144 -87507439 + MER2 DNA MER2_type 105 342 -3 23 33 0 0 chr2 165751078 165751108 -87505475 + AT_rich Low_complexity Low_complexity 1 30 0 1904 142 3 20 chr2 165751127 165751423 -87505160 - AluSx SINE Alu -21 291 1 516 303 108 43 chr2 165751428 165751460 -87505123 - L1ME4a LINE L1 -21 6100 6072 1390 19 0 0 chr2 165751460 165751621 -87504962 + L1PA3 LINE L1 5995 6155 0 516 303 108 43 chr2 165751621 165752323 -87504260 - L1ME4a LINE L1 -49 6072 5314 679 297 91 75 chr2 165752591 165753037 -87503546 + L2 LINE L2 2763 3220 -93 1737 172 14 14 chr2 165753037 165753334 -87503249 - AluJb SINE Alu -13 299 3 679 297 91 75 chr2 165753334 165753410 -87503173 + L2 LINE L2 3220 3293 -20 909 137 0 0 chr2 165753410 165753541 -87503042 + FLAM_A SINE Alu 2 132 -1 314 260 20 62 chr2 165753589 165753735 -87502848 - L1MC4a LINE L1 -1926 5882 5743 3292 214 60 15 chr2 165753793 165754577 -87502006 + L1MEc LINE L1 35 853 -5543 23 0 0 0 chr2 165754891 165754914 -87501669 + AT_rich Low_complexity Low_complexity 1 23 0 2032 136 3 0 chr2 165754914 165755201 -87501382 - AluSx SINE Alu -24 288 1 32380 103 11 54 chr2 165756244 165762670 -87493913 + L1PA7 LINE L1 9 6153 -1 1575 173 85 0 chr2 165764948 165765220 -87491363 - AluJb SINE Alu -17 295 1 23 0 0 0 chr2 165767965 165767988 -87488595 + AT_rich Low_complexity Low_complexity 1 23 0 2282 85 0 10 chr2 165768154 165768448 -87488135 + AluY SINE Alu 1 291 -20 1087 204 15 5 chr2 165768700 165768901 -87487682 - AluJo SINE Alu -107 205 3 191 265 88 29 chr2 165768905 165768973 -87487610 + L2 LINE L2 3238 3309 -4 181 349 28 37 chr2 165769236 165769345 -87487238 - MIR SINE MIR -54 208 101 225 0 0 0 chr2 165769409 165769434 -87487149 + (A)n Simple_repeat Simple_repeat 1 25 0 22 70 0 0 chr2 165769474 165769517 -87487066 + AT_rich Low_complexity Low_complexity 1 43 0 181 276 40 53 chr2 165770199 165770275 -87486308 + MER5A DNA MER1_type 86 160 -29 * 263 203 165 38 chr2 165770215 165770294 -87486289 - MER5B DNA MER1_type -88 90 2 1241 72 1 3 chr2 165770314 165770466 -87486117 - L1PA5 LINE L1 -396 5759 5608 3473 34 0 0 chr2 165770466 165770875 -87485708 + L1PA5 LINE L1 5737 6146 -8 1241 72 1 3 chr2 165770875 165770901 -87485682 - L1P1 LINE L1 -547 5608 5583 2310 58 41 7 chr2 165770929 165771222 -87485361 - AluY SINE Alu -8 303 1 2086 112 0 20 chr2 165771353 165771658 -87484925 - AluSp SINE Alu -14 299 1 192 97 0 0 chr2 165771677 165771708 -87484875 + (TATG)n Simple_repeat Simple_repeat 2 32 0 1795 164 3 3 chr2 165771708 165771994 -87484589 - AluSx SINE Alu -26 286 1 244 286 36 60 chr2 165772266 165772350 -87484233 - L2 LINE L2 -92 3180 3099 357 248 120 34 chr2 165772668 165772785 -87483798 + L2 LINE L2 3129 3255 -17 1838 156 26 3 chr2 165774099 165774401 -87482182 + AluJb SINE Alu 1 309 -3 1010 98 0 0 chr2 165774617 165774749 -87481834 - FLAM_C SINE Alu 0 143 12 205 224 102 0 chr2 165775348 165775397 -87481186 - L2 LINE L2 0 3272 3219 1557 173 69 0 chr2 165775489 165775766 -87480817 + AluJo SINE Alu 6 301 -11 358 204 97 11 chr2 165776676 165776769 -87479814 + MIR SINE MIR 92 192 -70 2397 76 3 0 chr2 165778083 165778384 -87478199 + AluSg SINE Alu 1 302 -8 5016 135 26 52 chr2 165778947 165780058 -87476525 + L1MB1 LINE L1 5082 6163 -5 927 320 122 49 chr2 165780540 165781052 -87475531 + L2 LINE L2 1432 1905 -1367 2866 154 82 11 chr2 165781052 165781577 -87475006 + MER68 LTR ERV1 1 562 0 927 320 122 49 chr2 165781577 165782489 -87474094 + L2 LINE L2 1905 3020 -252 233 286 286 18 chr2 165782906 165783074 -87473509 - MIR SINE MIR -49 213 1 222 206 0 0 chr2 165783161 165783224 -87473359 + (CAT)n Simple_repeat Simple_repeat 3 65 0 204 303 0 15 chr2 165784588 165784654 -87471929 + (CATATA)n Simple_repeat Simple_repeat 2 66 0 423 248 43 7 chr2 165785521 165785662 -87470921 + L1ME4a LINE L1 5973 6118 -3 200 33 0 33 chr2 165787161 165787191 -87469392 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 21 0 0 0 chr2 165787505 165787526 -87469057 + AT_rich Low_complexity Low_complexity 1 21 0 880 55 0 2 chr2 165788564 165788687 -87467896 + L1PA3 LINE L1 6009 6152 -3 947 234 43 13 chr2 165789031 165789262 -87467321 + MIR SINE MIR 15 252 -10 1277 156 14 92 chr2 165789355 165789644 -87466939 + AluJo SINE Alu 21 287 -20 324 64 0 0 chr2 165789644 165789691 -87466892 + (CCAA)n Simple_repeat Simple_repeat 1 47 0 286 336 43 0 chr2 165790472 165790588 -87465995 + MARNA DNA Mariner 357 477 -109 749 190 7 21 chr2 165791837 165791979 -87464604 + Tigger3(Golem) DNA MER2_type 2888 3027 -2 192 246 18 35 chr2 165792824 165792881 -87463702 + L2 LINE L2 2928 2983 -289 197 351 63 36 chr2 165792986 165793097 -87463486 + L2 LINE L2 3104 3217 -55 26 74 0 0 chr2 165793488 165793542 -87463041 + AT_rich Low_complexity Low_complexity 1 54 0 449 338 80 28 chr2 165793545 165793906 -87462677 - L2 LINE L2 -265 3048 2632 750 257 19 53 chr2 165795236 165795442 -87461141 - MIR SINE MIR -27 235 37 221 0 35 0 chr2 165796449 165796478 -87460105 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 324 167 12 60 chr2 165798038 165798122 -87458461 + MER116 DNA Mariner 1 80 0 258 155 35 0 chr2 165799778 165799836 -87456747 - L1ME4a LINE L1 0 6121 6062 27 0 0 0 chr2 165799839 165799866 -87456717 + AT_rich Low_complexity Low_complexity 1 27 0 24 0 0 0 chr2 165799897 165799921 -87456662 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr2 165801112 165801140 -87455443 + AT_rich Low_complexity Low_complexity 1 28 0 2358 66 3 13 chr2 165801309 165801610 -87454973 + AluY SINE Alu 1 298 -13 31 0 0 0 chr2 165802139 165802170 -87454413 + AT_rich Low_complexity Low_complexity 1 31 0 30 45 0 0 chr2 165802263 165802307 -87454276 + AT_rich Low_complexity Low_complexity 1 44 0 1923 143 0 6 chr2 165802716 165803030 -87453553 + AluSx SINE Alu 1 312 0 332 311 66 22 chr2 165803410 165803593 -87452990 - MIR SINE MIR -37 225 35 412 321 132 11 chr2 165804302 165804492 -87452091 - MIR SINE MIR -18 244 32 185 191 0 106 chr2 165804544 165804591 -87451992 - MIR3 SINE MIR -20 188 147 2294 79 0 3 chr2 165805770 165806061 -87450522 - AluSg SINE Alu -20 290 1 192 209 0 0 chr2 165806074 165806117 -87450466 - MIR SINE MIR -155 107 65 719 277 121 29 chr2 165806584 165807006 -87449577 + MLT1H LTR MaLR 4 533 -16 284 331 76 25 chr2 165807258 165807294 -87449289 - MIR SINE MIR -8 254 221 2479 68 3 0 chr2 165807294 165807604 -87448979 - AluY SINE Alu 0 311 1 284 331 76 25 chr2 165807604 165807724 -87448859 - MIR SINE MIR -41 221 90 1820 127 58 4 chr2 165807740 165808015 -87448568 + AluSq SINE Alu 1 290 -23 1356 194 51 31 chr2 165808730 165809023 -87447560 - AluJo SINE Alu -13 299 1 22 80 0 0 chr2 165809092 165809142 -87447441 + AT_rich Low_complexity Low_complexity 1 50 0 2207 109 3 3 chr2 165809187 165809500 -87447083 + AluSq SINE Alu 1 313 0 415 172 166 51 chr2 165809745 165809902 -87446681 + MER104 DNA MER2_type 5 179 -1 1894 145 56 11 chr2 165810861 165811220 -87445363 + THE1C LTR MaLR 1 375 0 21 0 0 0 chr2 165811374 165811395 -87445188 + AT_rich Low_complexity Low_complexity 1 21 0 1546 205 0 7 chr2 165811573 165811856 -87444727 - AluJo SINE Alu -13 299 19 1423 204 127 95 chr2 165813484 165813975 -87442608 + L1MC5 LINE L1 7086 7560 -401 2177 92 0 3 chr2 165813975 165814287 -87442296 + AluSq SINE Alu 1 311 0 1423 204 127 95 chr2 165814287 165814367 -87442216 + L1MC5 LINE L1 7560 7636 -325 4601 110 18 36 chr2 165814367 165815085 -87441498 + L1MA3 LINE L1 5546 6251 -54 2158 102 0 0 chr2 165815085 165815380 -87441203 + AluSx SINE Alu 1 295 -17 4601 110 18 36 chr2 165815380 165815435 -87441148 + L1MA3 LINE L1 6251 6305 0 1423 204 127 95 chr2 165815435 165815663 -87440920 + L1MC5 LINE L1 7636 7913 -48 2304 98 0 0 chr2 165815715 165816012 -87440571 + AluSg SINE Alu 1 297 -13 469 278 161 31 chr2 165816375 165816598 -87439985 - MIR SINE MIR -1 261 10 2207 118 0 0 chr2 165817714 165818019 -87438564 - AluSx SINE Alu -5 307 3 185 276 53 66 chr2 165819705 165819781 -87436802 - MIR3 SINE MIR -14 194 120 216 250 36 18 chr2 165820436 165820492 -87436091 - MIR SINE MIR -129 79 23 266 262 12 24 chr2 165820526 165820610 -87435973 + MLT1J LTR MaLR 1 83 -428 1732 191 0 16 chr2 165821711 165822025 -87434558 - AluJo SINE Alu -3 309 1 23 33 0 0 chr2 165822119 165822149 -87434434 + AT_rich Low_complexity Low_complexity 1 30 0 5136 180 47 18 chr2 165822290 165823584 -87432999 + L1PA16 LINE L1 4136 5496 -670 2213 105 0 3 chr2 165823584 165823888 -87432695 + AluY SINE Alu 1 303 -8 5136 180 47 18 chr2 165823888 165824576 -87432007 + L1PA16 LINE L1 5496 6163 -3 21 0 0 0 chr2 165825029 165825050 -87431533 + AT_rich Low_complexity Low_complexity 1 21 0 1567 197 25 16 chr2 165825222 165825537 -87431046 + MER2 DNA MER2_type 28 345 0 2119 109 3 3 chr2 165825729 165826031 -87430552 - AluSx SINE Alu -10 302 1 195 343 0 57 chr2 165827565 165827670 -87428913 - MIR SINE MIR -56 206 108 22 35 0 0 chr2 165829154 165829183 -87427400 + AT_rich Low_complexity Low_complexity 1 29 0 23 54 0 0 chr2 165829831 165829868 -87426715 + AT_rich Low_complexity Low_complexity 1 37 0 2496 136 58 5 chr2 165830695 165831107 -87425476 + Tigger2a DNA MER2_type 1 434 0 192 172 0 0 chr2 165833327 165833385 -87423198 + (CAT)n Simple_repeat Simple_repeat 3 60 0 21 0 0 0 chr2 165834095 165834116 -87422467 + AT_rich Low_complexity Low_complexity 1 21 0 1716 171 17 16 chr2 165834355 165834700 -87421883 - MER47B DNA MER2_type -1 417 25 2301 78 0 0 chr2 165834702 165835009 -87421574 - AluSc SINE Alu 0 307 1 21 36 0 0 chr2 165835499 165835527 -87421056 + AT_rich Low_complexity Low_complexity 1 28 0 36 23 0 0 chr2 165835723 165835766 -87420817 + AT_rich Low_complexity Low_complexity 1 43 0 1773 112 26 22 chr2 165835769 165835899 -87420684 - AluSx SINE Alu -44 268 140 2360 95 0 0 chr2 165835899 165836204 -87420379 - AluSc SINE Alu -4 305 1 1773 112 26 22 chr2 165836204 165836340 -87420243 - AluSx SINE Alu -172 140 1 2263 85 0 10 chr2 165837017 165837322 -87419261 + AluY SINE Alu 1 302 -9 393 240 96 16 chr2 165837562 165837687 -87418896 + MIR SINE MIR 116 250 -12 859 133 7 22 chr2 165837946 165838081 -87418502 - FLAM_C SINE Alu 0 133 1 2033 148 0 0 chr2 165838185 165838489 -87418094 + AluSx SINE Alu 1 304 -8 183 42 0 0 chr2 165839632 165839656 -87416927 + (TTC)n Simple_repeat Simple_repeat 3 26 0 302 291 121 24 chr2 165840206 165840371 -87416212 - L2 LINE L2 -86 3227 3047 2126 96 24 0 chr2 165841068 165841359 -87415224 - AluSg1 SINE Alu -11 298 1 24 0 0 0 chr2 165841563 165841587 -87414996 + AT_rich Low_complexity Low_complexity 1 24 0 23 68 0 0 chr2 165842161 165842205 -87414378 + AT_rich Low_complexity Low_complexity 1 44 0 855 131 7 22 chr2 165842207 165842344 -87414239 - FRAM SINE Alu -22 154 20 688 325 105 33 chr2 165842494 165843014 -87413569 - L2 LINE L2 -12 3301 2740 3125 149 35 51 chr2 165843046 165843696 -87412887 - L1MB3 LINE L1 -1 6182 5543 26 30 0 0 chr2 165843854 165843887 -87412696 + AT_rich Low_complexity Low_complexity 1 33 0 202 279 152 0 chr2 165844418 165844497 -87412086 + L2 LINE L2 3208 3298 -15 284 236 79 0 chr2 165844559 165844648 -87411935 + L1MC5 LINE L1 7706 7801 -160 694 226 3 142 chr2 165845769 165846079 -87410504 - LTR41 LTR ERVL -11 762 496 1660 197 10 0 chr2 165846383 165846692 -87409891 + AluJb SINE Alu 1 312 0 288 233 341 16 chr2 165846697 165846826 -87409757 - LTR41 LTR ERVL -600 173 3 407 179 116 27 chr2 165846827 165846939 -87409644 + L1MC5 LINE L1 7796 7917 -44 291 295 98 55 chr2 165846981 165847164 -87409419 + MIR SINE MIR 72 262 0 1748 190 43 0 chr2 165847545 165847914 -87408669 + L1MB5 LINE L1 5783 6167 -7 1354 159 37 83 chr2 165848381 165848707 -87407876 + AluJo SINE Alu 1 311 -1 23 0 0 0 chr2 165850001 165850024 -87406559 + AT_rich Low_complexity Low_complexity 1 23 0 689 209 14 7 chr2 165850441 165850580 -87406003 + AluJo SINE Alu 3 142 -170 962 155 12 19 chr2 165850783 165850944 -87405639 + AluSg/x SINE Alu 139 298 -11 1652 164 64 0 chr2 165851292 165851572 -87405011 - AluSx SINE Alu -14 298 1 942 239 29 25 chr2 165852863 165853102 -87403481 - MIR SINE MIR 0 262 23 2194 129 0 0 chr2 165853368 165853677 -87402906 + AluSx SINE Alu 1 309 -3 24 53 0 0 chr2 165854659 165854697 -87401886 + AT_rich Low_complexity Low_complexity 1 38 0 2091 173 3 0 chr2 165854857 165855203 -87401380 - MER7A DNA MER2_type 0 346 2 225 0 0 0 chr2 165856314 165856339 -87400244 + (T)n Simple_repeat Simple_repeat 1 25 0 248 324 83 28 chr2 165857678 165857786 -87398797 - L2 LINE L2 -1 3271 3158 249 312 26 0 chr2 165857893 165857970 -87398613 + L2 LINE L2 3194 3272 0 1978 123 11 7 chr2 165858572 165858856 -87397727 - AluSg SINE Alu -23 287 3 2507 71 0 0 chr2 165858864 165859175 -87397408 - AluY SINE Alu 0 311 1 216 377 37 33 chr2 165859178 165859422 -87397161 + L2 LINE L2 1986 2230 -1084 2528 126 17 10 chr2 165863835 165864249 -87392334 - L1M2 LINE L1 -542 5749 5333 2106 118 0 3 chr2 165864267 165864554 -87392029 - AluSg SINE Alu -24 286 1 2176 223 62 19 chr2 165864562 165865158 -87391425 - L1MD3 LINE L1 0 7995 7374 1602 180 5 88 chr2 165865564 165865986 -87390597 - MLT1B LTR MaLR 0 390 4 2033 123 28 0 chr2 165866193 165866478 -87390105 + AluSx SINE Alu 4 296 -16 335 339 191 32 chr2 165866924 165867149 -87389434 - L2 LINE L2 -1 3312 3124 1252 163 309 22 chr2 165867149 165867553 -87389030 - MLT2B1 LTR ERVL 0 520 1 335 339 191 32 chr2 165867553 165867766 -87388817 - L2 LINE L2 -189 3124 2804 359 278 35 75 chr2 165868006 165868179 -87388404 - MLT1K LTR MaLR -285 303 138 301 295 91 56 chr2 165868234 165868661 -87387922 + L1ME LINE L1 11 452 -5618 228 35 0 0 chr2 165868862 165868891 -87387692 + (CAA)n Simple_repeat Simple_repeat 2 30 0 2102 224 102 82 chr2 165869041 165869313 -87387270 + L1M4 LINE L1 2782 3047 -3099 1961 125 3 26 chr2 165869313 165869618 -87386965 + AluSg SINE Alu 1 298 -12 2102 224 102 82 chr2 165869618 165869974 -87386609 + L1M4 LINE L1 3047 3394 -2752 2076 100 0 17 chr2 165869974 165870291 -87386292 - AluSx SINE Alu 0 312 1 2102 224 102 82 chr2 165870291 165870846 -87385737 + L1M4 LINE L1 3394 3991 -2155 757 259 63 0 chr2 165870843 165871032 -87385551 + L1ME1 LINE L1 5965 6165 -1 * 1100 264 217 70 chr2 165871062 165871870 -87384713 - L2 LINE L2 -620 2694 1720 1497 158 75 15 chr2 165871870 165872136 -87384447 + AluJb SINE Alu 1 282 -30 1100 264 217 70 chr2 165872136 165872293 -87384290 - L2 LINE L2 -1594 1720 1587 23715 104 18 37 chr2 165872627 165876789 -87379794 - L1P3 LINE L1 -1609 4852 777 2253 95 0 7 chr2 165877574 165877878 -87378705 + AluY SINE Alu 1 302 -9 236 224 0 0 chr2 165877883 165877941 -87378642 - L1MC4 LINE L1 -1339 6703 6646 1806 106 78 0 chr2 165878397 165878653 -87377930 - AluSp SINE Alu -37 276 1 21 57 0 0 chr2 165878866 165878901 -87377682 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr2 165879352 165879375 -87377208 + AT_rich Low_complexity Low_complexity 1 23 0 509 71 0 0 chr2 165881907 165881977 -87374606 + L1PA5 LINE L1 6078 6147 -7 30 27 0 0 chr2 165881977 165882014 -87374569 + AT_rich Low_complexity Low_complexity 1 37 0 2242 192 97 67 chr2 165882015 165882672 -87373911 + L1MC4a LINE L1 7132 7808 0 378 281 168 12 chr2 165882829 165882996 -87373587 + MIR SINE MIR 43 235 -27 1606 165 0 11 chr2 165883756 165884023 -87372560 - AluJb SINE Alu -21 291 28 2061 136 0 13 chr2 165884045 165884390 -87372193 + AluSx SINE Alu 1 312 0 681 216 88 33 chr2 165884576 165884757 -87371826 + MER20 DNA MER1_type 29 219 0 249 354 31 21 chr2 165886124 165886220 -87370363 + MIR3 SINE MIR 85 181 -27 201 147 0 0 chr2 165887128 165887162 -87369421 + (T)n Simple_repeat Simple_repeat 1 34 0 384 230 145 56 chr2 165887229 165887533 -87369050 + L1MC4a LINE L1 5637 5967 -1841 1874 111 44 0 chr2 165888249 165888564 -87368019 + L1PBa LINE L1 1986 2314 -4549 1995 142 3 7 chr2 165888616 165888919 -87367664 - AluSx SINE Alu -6 306 5 955 105 46 0 chr2 165888923 165889075 -87367508 + L1MA3 LINE L1 6147 6305 0 346 182 56 91 chr2 165889081 165889224 -87367359 + L1ME4a LINE L1 5964 6101 -20 217 317 89 41 chr2 165889295 165889418 -87367165 + L3 LINE CR1 1371 1499 -78 1395 209 38 38 chr2 165889742 165890167 -87366416 + L1MDa LINE L1 1260 1684 -4856 1399 179 13 45 chr2 165890173 165890481 -87366102 + AluJo SINE Alu 2 299 -13 1059 174 0 55 chr2 165891061 165891297 -87365286 - AluJb SINE Alu -6 306 84 2755 7 0 3 chr2 165891989 165892297 -87364286 + AluYa5 SINE Alu 1 307 -4 258 369 45 9 chr2 165893035 165893146 -87363437 + L2 LINE L2 3157 3271 -1 598 158 105 0 chr2 165893751 165893865 -87362718 - MER3 DNA MER1_type -1 208 83 262 234 0 26 chr2 165894970 165895047 -87361536 + (CATATA)n Simple_repeat Simple_repeat 2 76 0 2814 6 0 0 chr2 165895754 165896065 -87360518 + AluYa5 SINE Alu 1 311 0 23 92 0 0 chr2 165896120 165896185 -87360398 + AT_rich Low_complexity Low_complexity 1 65 0 2010 92 14 14 chr2 165896325 165896619 -87359964 - AluY SINE Alu -17 294 1 2204 101 0 13 chr2 165896644 165896952 -87359631 + AluSc SINE Alu 1 304 -5 425 122 222 0 chr2 165896963 165897053 -87359530 + AluY SINE Alu 191 300 -11 2371 68 10 3 chr2 165897053 165897363 -87359220 + AluSp SINE Alu 1 312 -1 6328 91 11 30 chr2 165899564 165901063 -87355520 - L1PA11 LINE L1 -2 6172 4678 2150 136 0 0 chr2 165901222 165901532 -87355051 + AluSx SINE Alu 1 310 -2 1580 171 21 4 chr2 165901538 165901663 -87354920 + AluJb SINE Alu 1 122 -190 692 46 54 0 chr2 165901663 165901793 -87354790 + (TA)n Simple_repeat Simple_repeat 1 137 0 1580 171 21 4 chr2 165901793 165901947 -87354636 + AluJb SINE Alu 122 285 -27 2860 141 52 48 chr2 165902291 165902889 -87353694 + L1MB8 LINE L1 5579 6178 0 1590 185 7 30 chr2 165902898 165903195 -87353388 + AluJb SINE Alu 6 295 -17 480 324 73 58 chr2 165903523 165904042 -87352541 + L2 LINE L2 2553 3081 -191 2353 92 0 3 chr2 165904117 165904431 -87352152 - AluSq SINE Alu 0 313 1 494 175 0 71 chr2 165904702 165904828 -87351755 - L1PA11 LINE L1 -1 6173 6057 852 205 6 6 chr2 165904886 165905052 -87351531 - FAM SINE Alu -8 167 2 496 227 81 52 chr2 165905852 165906024 -87350559 + MER5B DNA MER1_type 2 178 0 1828 141 4 4 chr2 165908445 165908721 -87347862 - AluSx SINE Alu -36 276 1 22 70 0 0 chr2 165909684 165909727 -87346856 + AT_rich Low_complexity Low_complexity 1 43 0 276 164 27 9 chr2 165910147 165910255 -87346328 + L1MB4 LINE L1 5555 5700 -480 215 215 15 0 chr2 165910284 165910349 -87346234 + (TA)n Simple_repeat Simple_repeat 2 67 0 227 242 22 44 chr2 165910352 165910443 -87346140 + L1MC4 LINE L1 6615 6703 -1339 180 179 0 0 chr2 165910451 165910490 -87346093 + (TATG)n Simple_repeat Simple_repeat 3 41 0 1700 172 39 57 chr2 165910500 165910726 -87345857 + L1MB4 LINE L1 5781 5998 -182 1601 133 72 34 chr2 165910726 165911019 -87345564 - AluJb SINE Alu -8 304 1 1700 172 39 57 chr2 165911019 165911199 -87345384 + L1MB4 LINE L1 5998 6180 0 536 100 0 0 chr2 165911204 165911284 -87345299 + L1MB8 LINE L1 6093 6172 -6 2169 121 0 7 chr2 165911749 165912056 -87344527 - AluSq SINE Alu -8 305 1 336 314 117 21 chr2 165913538 165913726 -87342857 + MIR SINE MIR 20 225 -37 1175 266 189 25 chr2 165913988 165914810 -87341773 + L2 LINE L2 2293 3263 -50 406 268 58 14 chr2 165914935 165915073 -87341510 + L2 LINE L2 3169 3312 -1 612 242 75 91 chr2 165915123 165915375 -87341208 + MIR SINE MIR 3 250 -12 214 360 20 10 chr2 165916199 165916299 -87340284 - MIR SINE MIR -73 135 35 2882 3 0 3 chr2 165919761 165920080 -87336503 - AluYb8 SINE Alu 0 318 1 1135 68 0 0 chr2 165920214 165920362 -87336221 - AluY SINE Alu -3 308 161 248 254 119 0 chr2 165923466 165923533 -87333050 + MER5A DNA MER1_type 1 75 -114 764 174 0 8 chr2 165923534 165923666 -87332917 + FLAM_C SINE Alu 1 131 -2 1689 193 7 3 chr2 165923671 165923971 -87332612 + AluJo SINE Alu 1 301 -11 2166 104 20 0 chr2 165923974 165924272 -87332311 + AluSg SINE Alu 1 304 -6 1391 139 9 112 chr2 165924702 165925025 -87331558 + AluJb SINE Alu 14 303 -9 22 0 0 0 chr2 165925352 165925374 -87331209 + AT_rich Low_complexity Low_complexity 1 22 0 191 309 0 36 chr2 165925381 165925436 -87331147 - L2 LINE L2 -30 3242 3190 658 149 0 0 chr2 165925478 165925585 -87330998 + FLAM_A SINE Alu 24 130 -12 214 321 34 101 chr2 165925639 165925848 -87330735 - L2 LINE L2 -193 3079 2885 668 175 0 0 chr2 165925933 165926036 -87330547 + Tigger4(Zombi) DNA MER2_type 22 124 -2607 * 1217 120 24 19 chr2 165926032 165926240 -87330343 + Tigger4(Zombi) DNA MER2_type 2523 2731 0 295 320 103 18 chr2 165926778 165927106 -87329477 + L1ME LINE L1 5493 5849 -317 411 145 40 0 chr2 165927398 165927474 -87329109 - AluJ/FRAM SINE Alu -10 302 224 1445 178 55 113 chr2 165927477 165927628 -87328955 - L1ME LINE L1 -548 5618 5460 403 141 70 0 chr2 165927628 165927699 -87328884 - AluJo SINE Alu -166 136 61 1445 178 55 113 chr2 165927699 165928151 -87328432 - L1ME LINE L1 -706 5460 4996 383 366 47 17 chr2 165928600 165928832 -87327751 - L2 LINE L2 -482 2832 2594 2284 103 3 0 chr2 165928951 165929251 -87327332 + AluSx SINE Alu 1 301 -11 1638 29 0 10 chr2 165929470 165929674 -87326909 + L1PA5 LINE L1 5951 6152 -2 22 35 0 0 chr2 165929674 165929703 -87326880 + AT_rich Low_complexity Low_complexity 1 29 0 1089 303 67 27 chr2 165929905 165930354 -87326229 + L2 LINE L2 2826 3292 -21 21 0 0 0 chr2 165931019 165931040 -87325543 + AT_rich Low_complexity Low_complexity 1 21 0 2034 112 18 0 chr2 165931239 165931547 -87325036 + AluSx SINE Alu 1 313 0 433 315 47 0 chr2 165931738 165931865 -87324718 + MIR3 SINE MIR 70 202 -6 29 0 0 0 chr2 165932636 165932665 -87323918 + AT_rich Low_complexity Low_complexity 1 29 0 271 342 68 19 chr2 165933134 165933295 -87323288 + MIR3 SINE MIR 30 198 -10 229 318 169 40 chr2 165933892 165934040 -87322543 + MIR3 SINE MIR 19 185 -23 1902 133 8 100 chr2 165934759 165935128 -87321455 - MER7A DNA MER2_type 0 346 14 1837 124 78 0 chr2 165935174 165935457 -87321126 - AluSx SINE Alu -7 305 1 2129 123 0 10 chr2 165935790 165936091 -87320492 + AluSx SINE Alu 1 298 -14 602 129 0 10 chr2 165936796 165936897 -87319686 - HY3 scRNA scRNA -1 100 1 22 56 0 0 chr2 165936959 165936995 -87319588 + AT_rich Low_complexity Low_complexity 1 36 0 2085 180 0 13 chr2 165937524 165937919 -87318664 + L1MB3 LINE L1 5714 6103 -80 229 266 71 71 chr2 165937924 165938037 -87318546 - HAL1 LINE L1 -2044 463 351 836 273 48 32 chr2 165938122 165938433 -87318150 - HAL1 LINE L1 -2180 327 12 1384 159 0 4 chr2 165938544 165938777 -87317806 - AluSg/x SINE Alu -9 303 72 650 180 0 33 chr2 165940140 165940262 -87316321 + FLAM_C SINE Alu 1 118 -25 682 287 63 44 chr2 165940440 165940757 -87315826 + L2 LINE L2 2991 3313 0 221 342 34 43 chr2 165941168 165941285 -87315298 + MIR SINE MIR 8 123 -139 350 337 0 10 chr2 165941636 165941737 -87314846 + MIR SINE MIR 26 125 -137 2020 113 3 3 chr2 165941810 165942129 -87314454 - AluSx SINE Alu 0 319 1 591 182 8 23 chr2 165942293 165942425 -87314158 - L1M4c LINE L1 -4567 1817 1688 * 2866 161 27 44 chr2 165942398 165943036 -87313547 + L1M4c LINE L1 898 1524 -4860 974 204 0 0 chr2 165943036 165943212 -87313371 + FRAM SINE Alu 1 171 -5 524 223 0 87 chr2 165943217 165943401 -87313182 + L1M4c LINE L1 1516 1683 -4701 708 269 52 16 chr2 165943451 165943700 -87312883 + MIR SINE MIR 3 260 -2 23 0 0 0 chr2 165943847 165943870 -87312713 + AT_rich Low_complexity Low_complexity 1 23 0 1040 215 80 40 chr2 165944053 165944083 -87312500 - L1MC5 LINE L1 -280 7681 7654 2213 113 0 0 chr2 165944083 165944384 -87312199 - AluSc SINE Alu -8 301 1 1040 215 80 40 chr2 165944384 165944729 -87311854 - L1MC5 LINE L1 -307 7654 7291 453 298 50 0 chr2 165944764 165944905 -87311678 + MIR SINE MIR 115 262 0 508 332 53 42 chr2 165944921 165945204 -87311379 - L2 LINE L2 -791 2523 2238 212 342 60 87 chr2 165946174 165946323 -87310260 - L2 LINE L2 -13 3259 3115 1998 132 69 26 chr2 165946688 165947037 -87309546 + THE1B LTR MaLR 1 364 0 273 291 154 0 chr2 165948987 165949097 -87307486 + MIR SINE MIR 67 193 -69 25 31 0 0 chr2 165949167 165949199 -87307384 + AT_rich Low_complexity Low_complexity 1 32 0 806 203 13 13 chr2 165949203 165949361 -87307222 + FRAM SINE Alu 1 158 -8 24 32 0 0 chr2 165949402 165949433 -87307150 + AT_rich Low_complexity Low_complexity 1 31 0 2101 105 0 3 chr2 165949548 165949855 -87306728 + AluSx SINE Alu 1 306 0 1365 150 18 4 chr2 165950049 165950276 -87306307 + MER30 DNA MER1_type 1 230 0 2017 106 0 67 chr2 165950364 165950694 -87305889 - AluSg SINE Alu -2 308 1 1280 248 135 22 chr2 165950730 165951189 -87305394 - MLT1J LTR MaLR 0 511 1 1712 169 3 14 chr2 165951397 165951687 -87304896 - AluJo SINE Alu -23 289 3 2312 92 7 0 chr2 165951738 165952041 -87304542 + AluY SINE Alu 1 305 -6 435 322 101 14 chr2 165952409 165952617 -87303966 - MIR SINE MIR -27 235 10 367 250 103 59 chr2 165953064 165953200 -87303383 - MIR SINE MIR -120 142 1 197 347 52 89 chr2 165953523 165953665 -87302918 - L2 LINE L2 -338 2976 2830 2255 121 7 0 chr2 165953665 165953972 -87302611 + AluSx SINE Alu 3 311 -1 197 347 52 89 chr2 165953972 165954198 -87302385 - L2 LINE L2 -484 2830 2622 23 78 0 0 chr2 165954256 165954307 -87302276 + AT_rich Low_complexity Low_complexity 1 51 0 23 0 0 0 chr2 165954787 165954810 -87301773 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 165954924 165954945 -87301638 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr2 165955620 165955640 -87300943 + (TG)n Simple_repeat Simple_repeat 2 21 0 2372 80 10 0 chr2 165955641 165955941 -87300642 - AluSx SINE Alu -9 303 1 24 96 0 0 chr2 165956142 165956215 -87300368 + AT_rich Low_complexity Low_complexity 1 73 0 1884 158 7 3 chr2 165957014 165957312 -87299271 - AluSx SINE Alu -13 299 1 181 316 36 50 chr2 165957401 165957540 -87299043 - MIR SINE MIR -45 217 81 777 140 45 57 chr2 165957708 165957865 -87298718 - AluJb SINE Alu -121 191 37 758 290 71 29 chr2 165957871 165958199 -87298384 + L2 LINE L2 2710 3059 -254 2355 73 0 10 chr2 165958797 165959110 -87297473 - AluSp SINE Alu 0 310 1 1812 151 13 20 chr2 165959507 165959806 -87296777 + AluJb SINE Alu 1 297 -15 430 88 0 0 chr2 165961123 165961180 -87295403 - AluSg1 SINE Alu -15 297 241 1507 82 5 5 chr2 165961181 165961377 -87295206 - AluSg1 SINE Alu -113 196 1 1017 200 5 24 chr2 165961555 165961623 -87294960 + MER3 DNA MER1_type 1 69 -140 2280 163 47 29 chr2 165961623 165962072 -87294511 + MSTB2 LTR MaLR 1 457 0 1017 200 5 24 chr2 165962072 165962208 -87294375 + MER3 DNA MER1_type 69 201 -8 1821 120 68 19 chr2 165964064 165964389 -87292194 + L1MB3 LINE L1 5839 6179 -4 945 283 219 19 chr2 165964475 165965258 -87291325 - L2 LINE L2 -1 3312 2375 1028 238 64 57 chr2 165965279 165965429 -87291154 - L2 LINE L2 -1260 2054 1907 2208 110 3 0 chr2 165965429 165965720 -87290863 - AluSx SINE Alu -20 292 1 1028 238 64 57 chr2 165965720 165965993 -87290590 - L2 LINE L2 -1407 1907 1628 2186 123 0 3 chr2 165966047 165966357 -87290226 + AluSg SINE Alu 1 309 -1 2324 82 3 0 chr2 165966567 165966860 -87289723 - AluSp SINE Alu -18 295 2 2057 115 45 0 chr2 165967512 165967800 -87288783 + AluSx SINE Alu 1 301 -11 2270 110 0 0 chr2 165968242 165968550 -87288033 + AluSc SINE Alu 1 308 -1 750 137 13 59 chr2 165968570 165968723 -87287860 - L1MB5 LINE L1 -30 6144 5999 22 0 0 0 chr2 165969957 165969979 -87286604 + AT_rich Low_complexity Low_complexity 1 22 0 969 179 0 6 chr2 165970219 165970387 -87286196 + FRAM SINE Alu 1 158 -18 199 283 0 0 chr2 165970523 165970569 -87286014 + L2 LINE L2 3259 3304 -9 2400 84 7 0 chr2 165970723 165971031 -87285552 - AluSg SINE Alu 0 310 1 2129 139 0 0 chr2 165971402 165971704 -87284879 - AluSx SINE Alu -10 302 1 373 258 0 21 chr2 165971772 165971869 -87284714 + MER34 LTR ERV1 1 95 -447 1953 283 68 29 chr2 165971929 165972179 -87284404 + MER21B LTR ERV1 1 240 -623 1532 215 38 26 chr2 165972179 165972570 -87284013 - MSTD LTR MaLR 0 396 1 1953 283 68 29 chr2 165972570 165973043 -87283540 + MER21B LTR ERV1 240 752 -111 3225 157 33 83 chr2 165973742 165974367 -87282216 + L1MB8 LINE L1 4670 5325 -853 1555 181 7 7 chr2 165974367 165974643 -87281940 + AluJb SINE Alu 1 276 -36 3225 157 33 83 chr2 165974643 165974667 -87281916 + L1MB8 LINE L1 5325 5349 -829 459 35 0 0 chr2 165974667 165974724 -87281859 + (CA)n Simple_repeat Simple_repeat 2 58 0 3225 157 33 83 chr2 165974724 165975254 -87281329 + L1MB8 LINE L1 5349 5804 -374 2091 122 47 0 chr2 165975254 165975550 -87281033 + AluSg SINE Alu 1 310 0 3225 157 33 83 chr2 165975550 165975752 -87280831 + L1MB8 LINE L1 5804 6014 -164 271 143 0 0 chr2 165975818 165975867 -87280716 + Alu SINE Alu 246 294 -6 183 209 139 0 chr2 165976145 165976188 -87280395 + MIR SINE MIR 98 146 -116 583 251 85 38 chr2 165976669 165976879 -87279704 + MIR SINE MIR 32 253 -9 330 137 0 0 chr2 165976906 165976957 -87279626 + FLAM SINE Alu 81 131 -2 314 297 117 8 chr2 165976958 165977086 -87279497 + L1ME4a LINE L1 5336 5477 -2331 2424 84 0 3 chr2 165977182 165977490 -87279093 + AluSg SINE Alu 1 307 -3 1768 178 0 7 chr2 165977494 165977787 -87278796 + AluJb SINE Alu 1 291 -21 245 263 163 38 chr2 165977869 165978029 -87278554 + L1ME4a LINE L1 5941 6120 -1 293 235 15 0 chr2 165978892 165978960 -87277623 - MER103 DNA DNA 0 166 98 21555 54 3 5 chr2 165979050 165982624 -87273959 + L1PA5 LINE L1 2563 6146 -8 23 54 0 0 chr2 165982730 165982767 -87273816 + AT_rich Low_complexity Low_complexity 1 37 0 1504 147 94 4 chr2 165982968 165983233 -87273350 - AluJb SINE Alu -21 291 3 2390 105 0 0 chr2 165983652 165983965 -87272618 - AluSq SINE Alu 0 313 1 1568 257 93 81 chr2 165984122 165984678 -87271905 - L2 LINE L2 0 3313 2765 2152 120 0 0 chr2 165984678 165984970 -87271613 - AluSc SINE Alu -17 292 1 1568 257 93 81 chr2 165984970 165985248 -87271335 - L2 LINE L2 -548 2765 2450 2466 149 42 2 chr2 165985248 165985657 -87270926 + MSTA LTR MaLR 2 426 -2 1568 257 93 81 chr2 165985657 165985818 -87270765 - L2 LINE L2 -863 2450 2292 23 33 0 0 chr2 165986748 165986778 -87269805 + AT_rich Low_complexity Low_complexity 1 30 0 601 164 0 36 chr2 165987163 165987273 -87269310 + AluJo SINE Alu 27 132 -180 2425 64 0 7 chr2 165987632 165987929 -87268654 - AluY SINE Alu -15 296 2 286 362 69 9 chr2 165988286 165988402 -87268181 + L2 LINE L2 3127 3249 -23 1591 145 3 80 chr2 165988458 165988783 -87267800 + AluJo SINE Alu 1 300 -12 775 239 6 18 chr2 165988899 165989066 -87267517 + AluJo SINE Alu 111 275 -37 384 251 64 41 chr2 165989122 165989293 -87267290 - MER20B DNA MER1_type -608 175 1 1003 263 170 22 chr2 165989594 165990187 -87266396 + Charlie7 DNA MER1_type 39 719 -1893 559 183 73 26 chr2 165990175 165990366 -87266217 + Charlie7 DNA MER1_type 2410 2609 -3 * 2328 112 0 0 chr2 165990455 165990768 -87265815 + AluSq SINE Alu 1 313 0 2031 119 3 7 chr2 165990858 165991176 -87265407 + AluSq SINE Alu 1 317 0 24 32 0 0 chr2 165991453 165991484 -87265099 + AT_rich Low_complexity Low_complexity 1 31 0 23 54 0 0 chr2 165992073 165992110 -87264473 + AT_rich Low_complexity Low_complexity 1 37 0 1132 209 4 0 chr2 165992469 165992699 -87263884 + AluJb SINE Alu 82 312 0 816 120 17 0 chr2 165992858 165992998 -87263585 - FLAM_C SINE Alu 0 142 1 1258 247 99 11 chr2 165993099 165993464 -87263119 + MLT1F1 LTR MaLR 163 559 -8 1406 219 11 0 chr2 165994039 165994304 -87262279 + Tigger7 DNA MER2_type 1 268 -2219 318 109 0 36 chr2 165994334 165994389 -87262194 + Tigger7 DNA MER2_type 2535 2587 0 374 185 46 0 chr2 165994435 165994500 -87262083 - 5S rRNA rRNA -31 90 23 551 125 0 0 chr2 165994502 165994590 -87261993 - L1MB4 LINE L1 -42 6138 6051 2289 61 0 14 chr2 165994672 165994968 -87261615 + AluY SINE Alu 1 292 -19 1678 194 0 3 chr2 165995184 165995483 -87261100 - AluJb SINE Alu -14 298 1 2233 77 4 0 chr2 165995659 165995932 -87260651 - AluSp SINE Alu -19 294 21 313 253 84 0 chr2 165996064 165996159 -87260424 + MER31-int LTR ERV1 1965 2067 -2869 2196 159 18 8 chr2 165996210 165996601 -87259982 + MER57A LTR ERV1 9 403 0 579 241 9 46 chr2 165996691 165996907 -87259676 - Charlie1 DNA MER1_type -4 2757 2550 2048 105 36 24 chr2 165997094 165997427 -87259156 - L1PB1 LINE L1 -1 6150 5814 2837 71 15 5 chr2 165997427 165997812 -87258771 - L1P5 LINE L1 -476 5675 5284 1030 133 13 0 chr2 165998088 165998238 -87258345 - AluSx SINE Alu -21 291 140 450 118 0 0 chr2 165998238 165998306 -87258277 - AluSx SINE Alu -245 68 1 2280 100 3 0 chr2 165998543 165998842 -87257741 - AluSg SINE Alu -10 300 1 334 292 7 65 chr2 165998916 165999070 -87257513 + MER31-int LTR ERV1 2919 3063 -1873 1666 103 60 68 chr2 165999121 165999425 -87257158 + AluSg SINE Alu 4 305 0 219 36 0 0 chr2 165999470 165999498 -87257085 + (CATA)n Simple_repeat Simple_repeat 1 28 0 1084 125 81 0 chr2 165999513 165999673 -87256910 + AluSx SINE Alu 3 175 -137 732 208 79 129 chr2 165999686 165999888 -87256695 + MER31-int LTR ERV1 3764 3975 -961 2332 103 3 0 chr2 165999888 166000199 -87256384 + AluSp SINE Alu 2 313 0 2519 71 0 0 chr2 166000205 166000515 -87256068 + AluY SINE Alu 1 310 -1 732 208 79 129 chr2 166000515 166000661 -87255922 + MER31-int LTR ERV1 3980 4101 -835 695 148 0 0 chr2 166001883 166001991 -87254592 + AluJb SINE Alu 192 299 -13 2255 98 7 0 chr2 166001991 166002286 -87254297 + AluSq SINE Alu 1 297 -16 236 250 54 11 chr2 166002489 166002581 -87254002 + L1 LINE L1 4195 4290 -1856 1315 201 100 15 chr2 166002877 166003276 -87253307 - MER63B DNA MER1_type 0 436 4 297 198 329 29 chr2 166003277 166003405 -87253178 + L1ME4a LINE L1 5602 5690 -431 1965 159 0 0 chr2 166003405 166003713 -87252870 + AluSx SINE Alu 1 308 -4 297 198 329 29 chr2 166003713 166003791 -87252792 + L1ME4a LINE L1 5690 5870 -251 353 254 78 21 chr2 166004262 166004404 -87252179 + L2 LINE L2 1839 1988 -1326 24 32 0 0 chr2 166004578 166004609 -87251974 + AT_rich Low_complexity Low_complexity 1 31 0 696 204 0 8 chr2 166004825 166004957 -87251626 - FLAM_A SINE Alu -2 131 1 347 70 88 0 chr2 166004957 166005014 -87251569 - L1MA5 LINE L1 -3 6297 6236 21 36 0 0 chr2 166005109 166005137 -87251446 + AT_rich Low_complexity Low_complexity 1 28 0 228 67 0 0 chr2 166005483 166005513 -87251070 + (TG)n Simple_repeat Simple_repeat 1 30 0 225 167 0 0 chr2 166005533 166005569 -87251014 - Alu SINE Alu -20 282 247 1587 170 28 28 chr2 166005604 166005886 -87250697 - AluJo SINE Alu -30 282 1 723 144 34 0 chr2 166006161 166006279 -87250304 + FLAM_A SINE Alu 1 122 -11 24 0 0 0 chr2 166006279 166006303 -87250280 + AT_rich Low_complexity Low_complexity 1 24 0 688 96 0 0 chr2 166007467 166007561 -87249022 - AluSx SINE Alu -9 303 210 1121 88 0 0 chr2 166007569 166007705 -87248878 - AluSx SINE Alu -176 136 1 1904 165 3 3 chr2 166008643 166008952 -87247631 + AluJb SINE Alu 1 309 -3 22 0 0 0 chr2 166010251 166010273 -87246310 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr2 166011273 166011304 -87245279 + AT_rich Low_complexity Low_complexity 1 31 0 25 75 0 0 chr2 166012604 166012657 -87243926 + AT_rich Low_complexity Low_complexity 1 53 0 22 0 0 0 chr2 166017605 166017627 -87238956 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 166019148 166019170 -87237413 + AT_rich Low_complexity Low_complexity 1 22 0 28 48 0 0 chr2 166019588 166019630 -87236953 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr2 166019923 166019946 -87236637 + AT_rich Low_complexity Low_complexity 1 23 0 51 17 0 0 chr2 166020085 166020143 -87236440 + AT_rich Low_complexity Low_complexity 1 58 0 498 317 153 51 chr2 166020884 166021680 -87234903 - L2 LINE L2 -1 3271 2395 282 291 90 61 chr2 166022090 166022240 -87234343 + L1MC5 LINE L1 4765 4909 -1237 1681 159 42 36 chr2 166022240 166022375 -87234208 + AluJo SINE Alu 1 134 -178 2254 81 7 7 chr2 166022375 166022670 -87233913 + AluSp SINE Alu 2 296 -17 1681 159 42 36 chr2 166022670 166022842 -87233741 + AluJo SINE Alu 134 310 -2 282 291 90 61 chr2 166022842 166023281 -87233302 + L1MC5 LINE L1 4909 5371 -775 1420 157 157 0 chr2 166023281 166023542 -87233041 + AluJb SINE Alu 1 302 -10 411 230 22 28 chr2 166023564 166023742 -87232841 + GA-rich Low_complexity Low_complexity 3 179 0 751 236 81 0 chr2 166023774 166023935 -87232648 + FAM SINE Alu 1 174 -1 1095 238 50 85 chr2 166023987 166024471 -87232112 + L1MC5 LINE L1 5363 5829 -1979 31407 105 9 28 chr2 166024509 166030385 -87226198 + L1PA7 LINE L1 387 6152 -2 362 237 0 34 chr2 166030403 166030521 -87226062 + L1MC5 LINE L1 5813 5926 -1882 900 210 0 12 chr2 166030727 166030894 -87225689 + FRAM SINE Alu 1 165 -1 2684 23 0 3 chr2 166031079 166031384 -87225199 - AluY SINE Alu -7 304 1 1718 182 7 7 chr2 166031462 166031780 -87224803 + AluJb SINE Alu 1 312 0 1430 204 36 94 chr2 166031826 166032370 -87224213 + L1MC5 LINE L1 6542 7065 -896 201 175 0 0 chr2 166032426 166032466 -87224117 + (TA)n Simple_repeat Simple_repeat 2 41 0 2992 195 105 29 chr2 166032872 166033703 -87222880 - MER63C DNA MER1_type -6 924 31 2184 133 3 0 chr2 166034282 166034590 -87221993 - AluSx SINE Alu -3 309 1 216 149 0 0 chr2 166035906 166035953 -87220630 + (CAAAAA)n Simple_repeat Simple_repeat 3 49 0 1196 204 0 0 chr2 166036413 166036633 -87219950 + AluJb SINE Alu 89 308 -4 19704 157 50 36 chr2 166036648 166038114 -87218469 + L1M1 LINE L1 15 1460 -6105 1792 158 27 13 chr2 166038114 166038412 -87218171 - AluJb SINE Alu -10 302 1 19704 157 50 36 chr2 166038412 166041683 -87214900 + L1M1 LINE L1 1460 4815 -2750 2474 126 26 4 chr2 166041687 166042353 -87214230 - L1P4 LINE L1 -581 5587 4910 2130 141 0 3 chr2 166042777 166043089 -87213494 - AluSx SINE Alu -1 311 1 2661 202 37 3 chr2 166043089 166043707 -87212876 - Tigger6a DNA MER2_type -66 1017 379 1143 285 39 17 chr2 166043710 166044071 -87212512 - MLT1A2 LTR MaLR 0 374 6 2034 185 16 63 chr2 166044074 166044148 -87212435 - MLT1A2-int LTR MaLR 0 1735 1659 2225 110 0 3 chr2 166044148 166044449 -87212134 + AluSq SINE Alu 6 305 -8 2034 185 16 63 chr2 166044449 166044515 -87212068 - MLT1A2-int LTR MaLR -76 1659 1591 541 237 93 0 chr2 166044515 166044654 -87211929 + FRAM SINE Alu 2 153 -13 2034 185 16 63 chr2 166044654 166044955 -87211628 - MLT1A2-int LTR MaLR -144 1591 1314 308 276 11 0 chr2 166045047 166045134 -87211449 - MLT1A2-int LTR MaLR -969 766 679 1078 237 43 23 chr2 166045195 166045541 -87211042 - MLT1-int LTR MaLR -487 884 441 1869 150 14 0 chr2 166045543 166045829 -87210754 + AluJb SINE Alu 1 290 -22 2165 132 3 51 chr2 166045883 166046185 -87210398 - MER1B DNA MER1_type -2374 338 54 7925 85 4 13 chr2 166046185 166047266 -87209317 - MER11C LTR ERVK 0 1071 1 2165 132 3 51 chr2 166047266 166047318 -87209265 - MER1B DNA MER1_type -2658 54 1 1340 179 168 19 chr2 166047319 166047683 -87208900 - MLT1-int LTR MaLR -953 418 1 1306 257 119 15 chr2 166047683 166048154 -87208429 - MLT2B1 LTR ERVL 0 520 1 1777 181 43 16 chr2 166048154 166048524 -87208059 - Tigger6a DNA MER2_type -703 380 1 445 257 7 22 chr2 166048524 166048572 -87208011 - L1MA10 LINE L1 -26 6308 6261 2781 229 22 39 chr2 166048572 166048670 -87207913 - L1ME1 LINE L1 -143 6092 5994 2017 147 0 0 chr2 166048670 166048988 -87207595 - AluSx SINE Alu 0 318 1 2781 229 22 39 chr2 166048988 166049771 -87206812 - L1ME1 LINE L1 -241 5994 5323 2698 98 14 16 chr2 166049774 166050142 -87206441 - MER1A DNA MER1_type -162 367 1 3108 273 65 33 chr2 166050142 166051550 -87205033 - L1ME1 LINE L1 -4906 1490 38 3386 194 68 17 chr2 166052116 166052764 -87203819 - L1MB8 LINE L1 -2 6176 5484 2242 107 3 3 chr2 166052764 166053062 -87203521 - AluSq SINE Alu -15 298 1 3386 194 68 17 chr2 166053062 166053161 -87203422 - L1MB8 LINE L1 -694 5484 5391 1548 194 3 30 chr2 166053171 166053470 -87203113 - AluJb SINE Alu -21 291 1 2224 115 3 10 chr2 166053479 166053791 -87202792 - AluSx SINE Alu -1 311 2 320 384 35 6 chr2 166054132 166054304 -87202279 - MIR3 SINE MIR -13 195 19 1382 128 87 5 chr2 166055245 166055463 -87201120 + AluJb SINE Alu 1 236 -76 670 120 0 0 chr2 166055712 166055804 -87200779 + AluSq/x SINE Alu 43 134 -178 963 269 158 13 chr2 166055804 166056718 -87199865 - L1M4c LINE L1 -4695 2264 1212 * 6182 224 53 24 chr2 166056696 166056726 -87199857 - L1MC/D LINE L1 -744 6213 6185 2636 171 48 9 chr2 166056726 166057270 -87199313 - L1MC2 LINE L1 -2 6342 5778 6182 224 53 24 chr2 166057270 166058896 -87197687 - L1MC/D LINE L1 -772 6185 4554 1550 204 0 14 chr2 166058896 166059054 -87197529 - AluJo SINE Alu -22 290 136 1881 155 3 19 chr2 166059054 166059371 -87197212 - AluSx SINE Alu 0 312 1 1550 204 0 14 chr2 166059371 166059506 -87197077 - AluJo SINE Alu -176 136 1 6182 224 53 24 chr2 166059506 166059702 -87196881 - L1MC/D LINE L1 -2403 4554 4365 307 309 21 19 chr2 166060222 166060414 -87196169 - L1MC/D LINE L1 -6318 537 110 2834 202 24 15 chr2 166060488 166061166 -87195417 - L1MB4 LINE L1 0 6180 5497 1899 135 44 0 chr2 166061174 166061448 -87195135 - AluSx SINE Alu -24 288 3 22 0 0 0 chr2 166061454 166061476 -87195107 + AT_rich Low_complexity Low_complexity 1 22 0 2285 248 31 35 chr2 166061479 166062213 -87194370 - L1ME1 LINE L1 -6 6160 5430 4060 174 40 41 chr2 166062246 166062331 -87194252 - L1MB5 LINE L1 -17 6157 6073 784 167 0 23 chr2 166062331 166062463 -87194120 - FLAM_C SINE Alu -4 129 1 4060 174 40 41 chr2 166062463 166063064 -87193519 - L1MB5 LINE L1 -101 6073 5471 2069 116 6 31 chr2 166063064 166063384 -87193199 - AluSx SINE Alu 0 312 1 4060 174 40 41 chr2 166063384 166063744 -87192839 - L1MB5 LINE L1 -703 5471 5112 2359 97 6 3 chr2 166063744 166064055 -87192528 - AluSx SINE Alu 0 312 1 2237 96 3 16 chr2 166064066 166064369 -87192214 - AluSg SINE Alu -11 299 1 204 40 0 0 chr2 166064403 166064428 -87192155 + (T)n Simple_repeat Simple_repeat 1 25 0 7936 11 0 0 chr2 166064428 166065505 -87191078 - L1HS LINE L1 0 6155 5079 7191 19 0 0 chr2 166065502 166066343 -87190240 + L1HS LINE L1 4239 5079 -1067 * 2393 258 76 42 chr2 166066341 166066796 -87189787 - L1ME LINE L1 -579 5654 5216 * 2066 133 3 16 chr2 166066796 166067112 -87189471 - AluJb SINE Alu 0 312 1 2393 258 76 42 chr2 166067112 166067151 -87189432 - L1ME LINE L1 -1017 5216 5180 1836 137 7 3 chr2 166067151 166067435 -87189148 + AluSx SINE Alu 25 309 -3 1711 68 5 0 chr2 166067436 166067657 -87188926 + L1PA8 LINE L1 5947 6168 -4 2393 258 76 42 chr2 166067657 166067866 -87188717 - L1ME LINE L1 -1053 5180 4980 1964 148 3 0 chr2 166067866 166068196 -87188387 + AluSx SINE Alu 1 331 0 2393 258 76 42 chr2 166068196 166069103 -87187480 - L1ME LINE L1 -1253 4980 3981 * 2704 250 69 49 chr2 166069078 166069339 -87187244 - L1MEc LINE L1 -2870 3345 3091 2089 123 3 7 chr2 166069339 166069639 -87186944 + AluSx SINE Alu 14 312 0 2704 250 69 49 chr2 166069639 166070518 -87186065 - L1MEc LINE L1 -3124 3091 2211 2148 128 0 0 chr2 166070518 166070822 -87185761 - AluSx SINE Alu -8 304 1 2704 250 69 49 chr2 166070822 166071620 -87184963 - L1MEc LINE L1 -4004 2211 1430 2268 259 49 46 chr2 166073322 166074558 -87182025 + L1MC4a LINE L1 4900 5403 -743 28 0 0 0 chr2 166074575 166074603 -87181980 + AT_rich Low_complexity Low_complexity 1 28 0 1682 196 33 3 chr2 166074613 166074979 -87181604 + AluJb SINE Alu 2 376 0 2148 125 0 3 chr2 166074983 166075286 -87181297 + AluSq SINE Alu 1 302 -11 617 301 57 38 chr2 166075287 166075659 -87180924 + L1MC4a LINE L1 6187 6565 -1243 467 200 0 0 chr2 166075676 166075756 -87180827 + AluJ/FLAM SINE Alu 6 85 -227 25 0 0 0 chr2 166075788 166075813 -87180770 + AT_rich Low_complexity Low_complexity 1 25 0 1656 166 13 20 chr2 166076294 166076454 -87180129 - AluJo SINE Alu -13 299 140 2124 107 10 0 chr2 166076454 166076744 -87179839 - AluSg SINE Alu -17 293 1 1656 166 13 20 chr2 166076744 166076884 -87179699 - AluJo SINE Alu -172 140 1 525 206 10 0 chr2 166077086 166077188 -87179395 + FLAM_A SINE Alu 1 103 -39 306 0 0 0 chr2 166077199 166077233 -87179350 + (CA)n Simple_repeat Simple_repeat 1 34 0 1064 155 68 0 chr2 166077259 166077466 -87179117 + L1MB4 LINE L1 5940 6160 -20 387 0 0 0 chr2 166077504 166077547 -87179036 + (TA)n Simple_repeat Simple_repeat 2 44 0 518 183 43 17 chr2 166079080 166079195 -87177388 + FLAM_A SINE Alu 11 128 -14 683 241 108 64 chr2 166079285 166079542 -87177041 - L1MD2 LINE L1 -246 6113 5840 2539 59 0 0 chr2 166079542 166079846 -87176737 + AluY SINE Alu 1 304 -7 683 241 108 64 chr2 166079846 166079883 -87176700 - L1MD2 LINE L1 -519 5840 5806 269 140 0 20 chr2 166079898 166079948 -87176635 - L1P5 LINE L1 -332 5824 5776 332 213 0 0 chr2 166079984 166080059 -87176524 - L1MD2 LINE L1 -2002 5783 5709 381 283 92 13 chr2 166080347 166080499 -87176084 - MER117 DNA MER1_type -2 195 32 274 241 35 60 chr2 166080790 166080906 -87175677 - L3 LINE CR1 -801 776 664 341 278 30 53 chr2 166081969 166082102 -87174481 + L1MDa LINE L1 1258 1387 -5153 647 261 80 73 chr2 166082146 166082200 -87174383 - LTR33 LTR ERVL -5 516 464 2275 74 37 10 chr2 166082200 166082498 -87174085 + AluSq SINE Alu 1 306 -7 647 261 80 73 chr2 166082498 166082742 -87173841 - LTR33 LTR ERVL -57 464 138 1622 154 63 0 chr2 166082742 166083027 -87173556 - AluJo SINE Alu -9 303 1 647 261 80 73 chr2 166083027 166083167 -87173416 - LTR33 LTR ERVL -383 138 1 298 219 109 0 chr2 166083244 166083308 -87173275 - MLT1L LTR MaLR -76 539 469 590 174 24 84 chr2 166083767 166083806 -87172777 - L1ME1 LINE L1 -5 6161 6121 649 153 0 139 chr2 166083806 166083950 -87172633 - FLAM_A SINE Alu -9 124 1 590 174 24 84 chr2 166083950 166084077 -87172506 - L1ME1 LINE L1 -45 6121 6005 920 242 65 11 chr2 166084081 166084518 -87172065 - MLT1D LTR MaLR -4 501 5 1966 194 40 9 chr2 166084521 166084944 -87171639 - L1ME1 LINE L1 -157 6009 5574 721 100 10 0 chr2 166085095 166085195 -87171388 - FRAM SINE Alu -55 121 21 21 0 0 0 chr2 166085823 166085844 -87170739 + AT_rich Low_complexity Low_complexity 1 21 0 1839 185 45 118 chr2 166085999 166086440 -87170143 + L1MD3 LINE L1 6707 7178 -817 298 200 0 0 chr2 166086440 166086495 -87170088 + MLT1F1 LTR MaLR 68 122 -445 1839 185 45 118 chr2 166086495 166086532 -87170051 + L1MD3 LINE L1 7178 7216 -779 1609 177 0 15 chr2 166086532 166086803 -87169780 + AluJo SINE Alu 3 269 -43 1839 185 45 118 chr2 166086803 166087311 -87169272 + L1MD3 LINE L1 7216 7851 -144 2477 67 0 0 chr2 166087311 166087609 -87168974 + AluY SINE Alu 1 298 -13 1839 185 45 118 chr2 166087609 166087695 -87168888 + L1MD3 LINE L1 7851 7942 -53 2076 255 58 70 chr2 166087705 166088521 -87168062 + MER21B LTR ERV1 7 812 -51 1470 193 55 7 chr2 166088603 166088878 -87167705 - AluJo SINE Alu -24 288 1 2411 199 113 58 chr2 166088900 166089660 -87166923 - L1MC4 LINE L1 -48 7994 7193 2240 109 6 6 chr2 166089911 166090222 -87166361 - AluSx SINE Alu -1 311 1 246 279 29 67 chr2 166090921 166091161 -87165422 - L1 LINE L1 -1665 4481 4251 453 285 7 40 chr2 166091161 166091312 -87165271 - MER58B DNA MER1_type 0 341 196 902 238 44 85 chr2 166091341 166091800 -87164783 - L1 LINE L1 -1900 4246 3807 1439 129 75 0 chr2 166091800 166092040 -87164543 - Tigger2 DNA MER2_type 0 2718 2461 4297 146 14 38 chr2 166092114 166092697 -87163886 - Tigger2 DNA MER2_type -1974 744 149 2274 97 0 16 chr2 166092697 166093008 -87163575 - AluSx SINE Alu -6 306 1 4297 146 14 38 chr2 166093008 166093121 -87163462 - Tigger2 DNA MER2_type -2569 149 65 787 141 7 30 chr2 166093121 166093256 -87163327 + FLAM_A SINE Alu 2 133 0 4297 146 14 38 chr2 166093256 166093320 -87163263 - Tigger2 DNA MER2_type -2653 65 1 375 234 51 82 chr2 166093320 166093347 -87163236 - L1 LINE L1 -2338 3808 3782 1138 189 64 81 chr2 166093347 166093643 -87162940 - AluJo SINE Alu -10 292 2 375 234 51 82 chr2 166093643 166093773 -87162810 - L1 LINE L1 -2364 3782 3656 1611 174 8 0 chr2 166093974 166094238 -87162345 - AluJb SINE Alu -12 300 35 897 171 101 6 chr2 166094260 166094418 -87162165 - FAM SINE Alu -2 173 1 230 143 0 0 chr2 166094480 166094522 -87162061 - L1ME2 LINE L1 0 6164 6123 * 264 80 0 100 chr2 166094489 166094539 -87162044 - L1MB7 LINE L1 -19 6165 6121 1784 144 45 45 chr2 166094539 166094915 -87161668 + MLT1B LTR MaLR 15 390 0 4166 180 22 58 chr2 166094915 166096293 -87160290 - L1MB7 LINE L1 -57 6127 4790 2006 137 3 19 chr2 166096293 166096607 -87159976 - AluSx SINE Alu -1 311 3 2059 114 4 4 chr2 166097329 166097635 -87158948 - AluSx SINE Alu 0 306 1 310 305 34 26 chr2 166098451 166098585 -87157998 + MIR SINE MIR 37 170 -65 1696 137 62 42 chr2 166098789 166099095 -87157488 + AluJo SINE Alu 1 312 0 21 0 0 0 chr2 166099168 166099189 -87157394 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr2 166099350 166099388 -87157195 + AT_rich Low_complexity Low_complexity 1 38 0 1705 180 20 7 chr2 166099810 166100104 -87156479 + AluJo SINE Alu 1 298 -14 839 221 36 111 chr2 166100390 166100697 -87155886 - MLT1A1 LTR MaLR -79 286 3 1211 213 53 19 chr2 166100756 166100987 -87155596 + MER2 DNA MER2_type 1 247 -98 2223 98 0 7 chr2 166100987 166101294 -87155289 - AluSg SINE Alu -5 305 1 1211 213 53 19 chr2 166101294 166101381 -87155202 + MER2 DNA MER2_type 247 330 -15 21 0 0 0 chr2 166101495 166101516 -87155067 + AT_rich Low_complexity Low_complexity 1 21 0 35 41 0 0 chr2 166102171 166102220 -87154363 + AT_rich Low_complexity Low_complexity 1 49 0 201 119 15 45 chr2 166102220 166102287 -87154296 + (TTATA)n Simple_repeat Simple_repeat 5 69 0 2118 123 3 0 chr2 166102292 166102577 -87154006 - AluSx SINE Alu -26 286 1 2356 77 0 13 chr2 166103308 166103620 -87152963 + AluY SINE Alu 1 308 -3 1570 157 72 4 chr2 166103973 166104235 -87152348 + AluJo SINE Alu 12 291 -21 216 97 0 0 chr2 166104808 166104839 -87151744 + (TCCC)n Simple_repeat Simple_repeat 4 34 0 2192 115 0 7 chr2 166104842 166105146 -87151437 - AluSq SINE Alu -3 310 9 1557 75 30 5 chr2 166105168 166105369 -87151214 - AluY SINE Alu -105 206 1 1870 156 0 32 chr2 166105379 166105694 -87150889 - AluJb SINE Alu -5 307 3 319 219 19 156 chr2 166105838 166106043 -87150540 + L1M4 LINE L1 4809 4985 -1161 201 39 0 0 chr2 166106461 166106487 -87150096 + (CA)n Simple_repeat Simple_repeat 2 27 0 236 300 0 0 chr2 166106886 166106946 -87149637 + (CGTG)n Simple_repeat Simple_repeat 4 63 0 387 188 139 20 chr2 166107011 166107112 -87149471 - MER58B DNA MER1_type 0 341 229 1721 129 94 46 chr2 166107118 166107489 -87149094 + MLT2C1 LTR ERVL 1 389 -8 32 57 0 0 chr2 166107522 166107575 -87149008 + AT_rich Low_complexity Low_complexity 1 53 0 612 180 23 31 chr2 166107649 166107777 -87148806 + FLAM_C SINE Alu 1 127 -16 1966 104 0 27 chr2 166107810 166107927 -87148656 + AluSq SINE Alu 21 140 -173 2251 112 0 3 chr2 166107927 166108223 -87148360 + AluSg SINE Alu 1 295 -15 1966 104 0 27 chr2 166108223 166108403 -87148180 + AluSq SINE Alu 140 310 -3 991 191 83 58 chr2 166108415 166108693 -87147890 + AluJo SINE Alu 3 287 -15 1263 156 85 37 chr2 166108937 166109258 -87147325 - AluJo SINE Alu 0 334 1 347 86 0 43 chr2 166109570 166109640 -87146943 + AluS SINE Alu 1 67 -235 2094 133 14 11 chr2 166109640 166110002 -87146581 + L1MA4A LINE L1 5936 6298 -5 2262 87 0 10 chr2 166110621 166110919 -87145664 - AluY SINE Alu -16 295 1 672 215 127 59 chr2 166111369 166111606 -87144977 - MIR SINE MIR -2 260 8 204 40 0 0 chr2 166112508 166112533 -87144050 + (A)n Simple_repeat Simple_repeat 1 25 0 25 65 0 0 chr2 166112636 166112682 -87143901 + GC_rich Low_complexity Low_complexity 1 46 0 187 382 22 44 chr2 166114752 166114888 -87141695 - L2 LINE L2 -77 3195 3063 1189 182 73 31 chr2 166115088 166115374 -87141209 + AluJo SINE Alu 3 300 -2 1337 159 112 28 chr2 166115828 166116079 -87140504 - AluJb SINE Alu -32 280 9 1990 128 24 10 chr2 166116800 166117090 -87139493 + AluJb SINE Alu 1 294 -18 283 281 128 25 chr2 166117313 166117516 -87139067 - MLT1H1 LTR MaLR -11 544 321 257 250 29 19 chr2 166117652 166117756 -87138827 - MLT1H LTR MaLR -432 117 13 226 153 118 35 chr2 166117870 166117955 -87138628 + L1MC5 LINE L1 7834 7925 -36 353 262 79 27 chr2 166118479 166118644 -87137939 - MIR SINE MIR 0 262 53 29 28 0 0 chr2 166118769 166118805 -87137778 + AT_rich Low_complexity Low_complexity 1 36 0 1126 127 76 35 chr2 166119438 166119635 -87136948 - AluSg/x SINE Alu -26 284 80 636 134 134 0 chr2 166119654 166119766 -87136817 - FLAM_C SINE Alu -16 127 1 816 253 116 23 chr2 166120128 166120472 -87136111 - L1MCc LINE L1 -5007 1416 1041 2082 111 0 0 chr2 166120480 166120759 -87135824 - AluSg SINE Alu -31 279 1 265 241 72 0 chr2 166120766 166120849 -87135734 - L1MC4 LINE L1 -477 7565 7477 326 375 22 5 chr2 166121087 166121271 -87135312 - L1MEd LINE L1 -5449 670 484 1815 135 7 38 chr2 166121312 166121600 -87134983 - AluSg SINE Alu -31 279 1 276 250 100 0 chr2 166122074 166122154 -87134429 - MER45B DNA AcHobo -624 416 329 382 250 100 0 chr2 166122217 166122317 -87134266 - MER45B DNA AcHobo -872 168 59 2035 125 20 3 chr2 166122566 166122869 -87133714 - AluSx SINE Alu -4 308 1 434 277 0 17 chr2 166123743 166123862 -87132721 + MER94 DNA DNA 4 120 -14 357 261 6 62 chr2 166123895 166124056 -87132527 - HAL1 LINE L1 -59 2448 2297 23 0 0 0 chr2 166124214 166124237 -87132346 + AT_rich Low_complexity Low_complexity 1 23 0 988 263 124 48 chr2 166124425 166125126 -87131457 - HAL1 LINE L1 -741 1766 979 6906 64 22 0 chr2 166125126 166126054 -87130529 - L1PA5 LINE L1 -8 6146 5215 988 263 124 48 chr2 166126054 166126258 -87130325 - HAL1 LINE L1 -1528 979 792 2177 85 0 0 chr2 166126654 166126997 -87129586 - AluY SINE Alu 0 343 1 773 172 133 16 chr2 166127041 166127275 -87129308 - L1MB3 LINE L1 -2 6181 5946 1282 169 77 0 chr2 166127275 166127536 -87129047 + MER7A DNA MER2_type 67 345 -1 845 123 0 32 chr2 166127536 166127690 -87128893 + L1MB3 LINE L1 5785 5933 -250 2330 78 0 3 chr2 166127741 166128034 -87128549 + AluY SINE Alu 1 292 -19 814 238 57 16 chr2 166128058 166128306 -87128277 + L1ME3A LINE L1 5696 5953 -217 665 235 43 32 chr2 166128544 166128731 -87127852 + MIR SINE MIR 71 259 -3 199 231 0 19 chr2 166128785 166128837 -87127746 - L2 LINE L2 -1 3312 3262 187 250 0 39 chr2 166128805 166128857 -87127726 - MIR SINE MIR -14 248 199 * 229 167 42 0 chr2 166129756 166129804 -87126779 - MER46C DNA MER2_type -287 51 2 1487 150 39 18 chr2 166129825 166130111 -87126472 + AluSx SINE Alu 2 293 -19 690 211 16 8 chr2 166130498 166130626 -87125957 - FLAM_A SINE Alu -4 129 1 299 305 181 40 chr2 166131197 166131305 -87125278 + MIR SINE MIR 5 96 -166 1762 169 6 13 chr2 166131305 166131618 -87124965 - AluJb SINE Alu -1 311 1 299 305 181 40 chr2 166131618 166131735 -87124848 + MIR SINE MIR 96 262 0 26 30 0 0 chr2 166131740 166131773 -87124810 + AT_rich Low_complexity Low_complexity 1 33 0 2266 89 3 3 chr2 166131898 166132191 -87124392 + AluSp SINE Alu 1 293 -20 2550 68 0 0 chr2 166132249 166132560 -87124023 + AluY SINE Alu 1 311 0 24 77 0 0 chr2 166132717 166132769 -87123814 + AT_rich Low_complexity Low_complexity 1 52 0 1460 175 0 68 chr2 166132950 166133258 -87123325 - AluJo SINE Alu -25 287 1 264 279 39 29 chr2 166133331 166133435 -87123148 + MIR SINE MIR 131 235 -27 189 200 0 50 chr2 166133405 166133445 -87123138 + L2 LINE L2 3251 3288 -25 * 250 188 12 38 chr2 166133455 166133535 -87123048 + (TTA)n Simple_repeat Simple_repeat 2 79 0 1426 221 11 3 chr2 166133679 166133964 -87122619 - AluJo SINE Alu -25 287 1 1718 162 7 40 chr2 166135116 166135419 -87121164 + AluJb SINE Alu 1 293 -19 3191 174 96 43 chr2 166135789 166136273 -87120310 - L1MB8 LINE L1 -6 6172 5715 1487 218 7 0 chr2 166136273 166136553 -87120030 + AluJo SINE Alu 1 282 -30 3191 174 96 43 chr2 166136553 166137019 -87119564 - L1MB8 LINE L1 -463 5715 5167 252 54 0 0 chr2 166137360 166137397 -87119186 - L1MB8 LINE L1 -12 6166 6130 1348 146 75 26 chr2 166137589 166137928 -87118655 + L1M4 LINE L1 5123 5487 -687 1694 152 13 36 chr2 166137928 166138230 -87118353 + AluJo SINE Alu 1 295 -17 1348 146 75 26 chr2 166138230 166138311 -87118272 + L1M4 LINE L1 5487 5563 -611 6148 184 88 21 chr2 166138319 166139759 -87116824 - MER52A LTR ERV1 -12 1743 1 416 219 219 0 chr2 166139782 166139928 -87116655 + L1M4 LINE L1 5568 5745 -439 22 35 0 0 chr2 166140908 166140937 -87115646 + AT_rich Low_complexity Low_complexity 1 29 0 916 143 0 29 chr2 166141322 166141462 -87115121 + AluJo SINE Alu 1 136 -176 1635 169 86 0 chr2 166141519 166141797 -87114786 + AluJb SINE Alu 1 302 -10 2134 105 31 0 chr2 166143092 166143378 -87113205 + AluSg SINE Alu 1 295 -15 1457 170 0 38 chr2 166144085 166144350 -87112233 + AluJo SINE Alu 42 296 -16 2693 13 7 3 chr2 166144402 166144712 -87111871 - AluYa5 SINE Alu 0 311 1 228 321 12 24 chr2 166144741 166144825 -87111758 + MIR SINE MIR 58 140 -68 2070 106 3 3 chr2 166145798 166146101 -87110482 + AluSx SINE Alu 1 303 0 2089 141 3 0 chr2 166146820 166147125 -87109458 - AluSq SINE Alu -7 306 1 2289 116 3 0 chr2 166149391 166149702 -87106881 - AluSx SINE Alu 0 312 1 2057 120 18 0 chr2 166149752 166150071 -87106512 - AluSq SINE Alu 0 325 2 837 153 0 0 chr2 166150506 166150630 -87105953 - FLAM_C SINE Alu -19 124 1 2138 108 4 0 chr2 166150670 166150975 -87105608 + AluSc SINE Alu 1 306 0 210 247 13 78 chr2 166153401 166153478 -87103105 - L2 LINE L2 -20 3252 3181 2394 290 205 25 chr2 166153495 166153714 -87102869 - L2 LINE L2 -250 3063 2885 2156 47 77 4 chr2 166153714 166153988 -87102595 + AluY SINE Alu 1 294 -17 2394 290 205 25 chr2 166153988 166155875 -87100708 - L2 LINE L2 -428 2885 607 439 332 62 22 chr2 166155882 166156108 -87100475 - L2 LINE L2 -2817 497 263 269 250 95 0 chr2 166156492 166156576 -87100007 + MIR SINE MIR 169 260 -2 267 330 0 36 chr2 166156655 166156766 -87099817 + MIR SINE MIR 1 107 -155 346 237 25 68 chr2 166156766 166156829 -87099754 - MER5B DNA MER1_type 0 178 121 2435 87 0 3 chr2 166156829 166157139 -87099444 + AluSx SINE Alu 1 309 -3 346 237 25 68 chr2 166157139 166157193 -87099390 - MER5B DNA MER1_type -57 121 66 267 256 128 45 chr2 166157186 166157319 -87099264 + MIR SINE MIR 114 257 -5 * 2081 119 3 17 chr2 166157320 166157622 -87098961 - AluSx SINE Alu -14 298 1 718 233 55 0 chr2 166157913 166158076 -87098507 + AluJb SINE Alu 120 291 -21 290 297 45 27 chr2 166158445 166158556 -87098027 + L2 LINE L2 3156 3268 -4 1447 173 67 20 chr2 166158773 166159115 -87097468 - L1MB4 LINE L1 -19 6161 5804 23 0 0 0 chr2 166159924 166159947 -87096636 + AT_rich Low_complexity Low_complexity 1 23 0 708 160 16 24 chr2 166160250 166160375 -87096208 + FLAM_C SINE Alu 10 133 -10 994 179 30 15 chr2 166160446 166160647 -87095936 - L1MB5 LINE L1 -80 6094 5891 284 0 0 27 chr2 166161134 166161171 -87095412 + (TTTTTG)n Simple_repeat Simple_repeat 1 36 0 2142 91 20 7 chr2 166161452 166161748 -87094835 - AluSq SINE Alu -13 300 1 2344 107 10 0 chr2 166161827 166162136 -87094447 - AluSq SINE Alu -1 312 1 750 236 99 58 chr2 166162340 166162770 -87093813 + LTR56 LTR ERV1 11 437 0 396 0 0 0 chr2 166164637 166164681 -87091902 + (TG)n Simple_repeat Simple_repeat 1 44 0 21 57 0 0 chr2 166164850 166164885 -87091698 + AT_rich Low_complexity Low_complexity 1 35 0 212 220 20 0 chr2 166167871 166167921 -87088662 + (TA)n Simple_repeat Simple_repeat 1 51 0 26 64 0 0 chr2 166168344 166168391 -87088192 + AT_rich Low_complexity Low_complexity 1 47 0 1796 159 0 11 chr2 166169786 166170069 -87086514 + AluSx SINE Alu 1 280 -32 743 189 141 11 chr2 166170252 166170437 -87086146 + MER3 DNA MER1_type 1 209 0 725 166 140 4 chr2 166171035 166171291 -87085292 + MER7A DNA MER2_type 25 335 -1 22 0 0 0 chr2 166173173 166173195 -87083388 + AT_rich Low_complexity Low_complexity 1 22 0 1294 170 26 0 chr2 166173510 166173739 -87082844 - AluSx SINE Alu -77 235 1 200 299 69 11 chr2 166174382 166174469 -87082114 + L2 LINE L2 1829 1920 -1394 262 218 151 0 chr2 166174956 166175060 -87081523 - MIR SINE MIR -84 124 3 246 275 55 33 chr2 166175307 166175398 -87081185 - L3 LINE CR1 -224 1353 1261 * 581 249 110 91 chr2 166175377 166175686 -87080897 + L2 LINE L2 2980 3294 -19 206 254 0 18 chr2 166175686 166175741 -87080842 + (CATATA)n Simple_repeat Simple_repeat 5 58 0 299 260 130 31 chr2 166175859 166176051 -87080532 - HAL1 LINE L1 -1 2506 2296 735 193 124 27 chr2 166176065 166176311 -87080272 - L1MB3 LINE L1 -16 6158 5882 570 112 0 56 chr2 166176311 166176437 -87080146 - AluSx SINE Alu 0 312 200 1004 82 0 15 chr2 166176443 166176578 -87080005 - AluSx SINE Alu -179 133 1 1866 157 50 55 chr2 166176578 166176999 -87079584 - L1MB3 LINE L1 -289 5894 5476 1322 94 11 11 chr2 166177123 166177314 -87079269 - AluSg/x SINE Alu -3 309 119 1546 158 24 4 chr2 166177399 166177646 -87078937 + AluJb SINE Alu 1 252 -60 1430 231 107 11 chr2 166177648 166178199 -87078384 + L1ME2 LINE L1 5320 5923 -241 237 48 0 48 chr2 166179138 166179180 -87077403 - AluSg/x SINE Alu -177 125 86 * 350 213 88 0 chr2 166179152 166179232 -87077351 - AluSc SINE Alu -212 87 1 2419 81 0 3 chr2 166179375 166179682 -87076901 + AluSg SINE Alu 1 306 -4 1424 184 99 0 chr2 166180055 166180327 -87076256 - AluJb SINE Alu -13 299 1 1991 135 51 0 chr2 166181691 166181811 -87074772 + AluSx SINE Alu 1 113 -199 192 40 0 0 chr2 166181811 166181836 -87074747 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 1991 135 51 0 chr2 166181836 166182011 -87074572 + AluSx SINE Alu 113 311 -1 215 200 0 18 chr2 166182017 166182072 -87074511 + GA-rich Low_complexity Low_complexity 3 56 0 954 143 0 0 chr2 166182409 166182542 -87074041 + AluSq/x SINE Alu 1 133 -180 2089 94 9 44 chr2 166182545 166182864 -87073719 + AluY SINE Alu 1 308 -3 1855 152 31 3 chr2 166182875 166183164 -87073419 + AluJo SINE Alu 1 297 -15 582 279 90 30 chr2 166183328 166183561 -87073022 + MIR SINE MIR 2 248 -14 2089 146 0 0 chr2 166184771 166185080 -87071503 - AluJb SINE Alu -3 309 1 1880 158 7 7 chr2 166185397 166185695 -87070888 - AluJo SINE Alu -10 302 5 327 209 127 22 chr2 166185913 166186047 -87070536 + HAL1 LINE L1 242 389 -2118 359 293 185 10 chr2 166186298 166186503 -87070080 + MIR SINE MIR 20 260 -2 290 364 51 8 chr2 166186531 166186649 -87069934 + L2 LINE L2 3150 3272 0 2430 88 0 0 chr2 166186751 166187058 -87069525 - AluSx SINE Alu -5 307 1 848 178 114 111 chr2 166187140 166187438 -87069145 - L1ME3A LINE L1 -5 6234 5936 589 212 163 5 chr2 166187475 166187659 -87068924 - L1ME3A LINE L1 -400 5839 5627 546 243 88 40 chr2 166187660 166188059 -87068524 - L1ME3A LINE L1 -4049 2347 1930 413 317 28 36 chr2 166188085 166188259 -87068324 - L1ME3A LINE L1 -4576 1820 1647 2193 88 37 7 chr2 166188259 166188556 -87068027 + AluSx SINE Alu 3 308 -4 413 317 28 36 chr2 166188556 166188630 -87067953 - L1ME3A LINE L1 -4749 1647 1574 1657 158 42 33 chr2 166188644 166188974 -87067609 + MER7A DNA MER2_type 2 332 -14 444 289 67 49 chr2 166189007 166189353 -87067230 - L1MEc LINE L1 -4826 1542 1040 1721 129 82 25 chr2 166189447 166189726 -87066857 - AluJo SINE Alu -17 295 1 334 302 119 20 chr2 166189728 166190038 -87066545 - L1MEc LINE L1 -5149 1089 786 445 378 67 30 chr2 166190513 166190844 -87065739 - L2 LINE L2 -2 3270 2928 252 236 0 0 chr2 166190837 166190892 -87065691 + L2 LINE L2 3258 3312 -1 * 215 288 15 0 chr2 166191029 166191095 -87065488 + CT-rich Low_complexity Low_complexity 3 69 0 470 232 116 45 chr2 166192082 166192237 -87064346 + MIR SINE MIR 13 178 -84 419 275 0 30 chr2 166192243 166192374 -87064209 - L2 LINE L2 -48 3265 3139 1890 214 37 9 chr2 166192374 166192805 -87063778 - MLT1F LTR MaLR 0 542 100 277 0 0 53 chr2 166192806 166192844 -87063739 - MLT2B2 LTR ERVL 0 515 480 405 0 0 0 chr2 166192847 166192892 -87063691 + (TG)n Simple_repeat Simple_repeat 2 46 0 342 147 59 15 chr2 166193077 166193145 -87063438 + Tigger5 DNA MER2_type 2253 2323 0 193 333 56 44 chr2 166193396 166193486 -87063097 + L3 LINE CR1 1452 1542 -35 1913 152 0 14 chr2 166194403 166194741 -87061842 + AluJb SINE Alu 1 334 0 2000 141 0 23 chr2 166195009 166195313 -87061270 - AluSx SINE Alu -15 297 1 1658 165 70 0 chr2 166195521 166195793 -87060790 + AluJo SINE Alu 1 291 -21 2451 91 0 0 chr2 166197757 166198065 -87058518 + AluSg SINE Alu 1 308 -2 338 283 200 23 chr2 166198254 166198636 -87057947 - L2 LINE L2 -69 3244 2785 252 268 195 8 chr2 166199260 166199383 -87057200 - MIR SINE MIR -31 231 86 324 315 102 76 chr2 166200772 166201194 -87055389 - L1M2 LINE L1 -5889 960 528 1759 231 65 14 chr2 166201239 166201758 -87054825 - L1MC4a LINE L1 -8 7800 7255 5641 142 30 7 chr2 166202006 166203043 -87053540 + L1MC2 LINE L1 5284 6344 0 219 309 59 52 chr2 166203167 166203303 -87053280 - MIR3 SINE MIR -70 138 2 2208 108 0 7 chr2 166204208 166204505 -87052078 - AluSx SINE Alu -17 295 1 187 394 0 39 chr2 166204538 166204718 -87051865 + L2 LINE L2 1166 1338 -1976 767 161 23 15 chr2 166204732 166204862 -87051721 + AluJ SINE Alu 1 131 -171 505 157 0 22 chr2 166204871 166204960 -87051623 + AluJ SINE Alu 209 295 -17 345 318 75 68 chr2 166205116 166205420 -87051163 + L2 LINE L2 1529 1838 -1476 2177 109 3 67 chr2 166205420 166205751 -87050832 - AluSx SINE Alu -2 310 1 345 318 75 68 chr2 166205751 166205899 -87050684 + L2 LINE L2 1838 1984 -1330 1687 166 0 24 chr2 166205910 166206200 -87050383 - AluJo SINE Alu -24 288 12 2371 71 0 3 chr2 166207224 166207520 -87049063 + AluSx SINE Alu 1 295 -17 185 328 31 0 chr2 166208685 166208749 -87047834 + L2 LINE L2 2159 2224 -1090 582 312 112 37 chr2 166208840 166209299 -87047284 + L2 LINE L2 2733 3290 -23 1033 142 89 0 chr2 166210215 166210405 -87046178 - MER3 DNA MER1_type 0 209 3 301 93 0 0 chr2 166210908 166210951 -87045632 - MADE1 DNA Mariner -37 43 1 333 166 112 53 chr2 166211838 166211964 -87044619 - MIR SINE MIR -59 149 16 32 26 0 0 chr2 166212622 166212661 -87043922 + AT_rich Low_complexity Low_complexity 1 39 0 2125 133 0 0 chr2 166212661 166212969 -87043614 - AluSx SINE Alu -4 308 1 382 268 117 46 chr2 166213003 166213034 -87043549 - L1ME4a LINE L1 -267 5854 5827 2229 74 0 4 chr2 166213034 166213305 -87043278 - AluSc SINE Alu -21 288 19 382 268 117 46 chr2 166213305 166213512 -87043071 - L1ME4a LINE L1 -294 5827 5599 21 0 0 0 chr2 166213984 166214005 -87042578 + AT_rich Low_complexity Low_complexity 1 21 0 869 127 0 8 chr2 166214041 166214167 -87042416 - AluSq/x SINE Alu -187 125 1 3640 148 65 25 chr2 166215347 166215405 -87041178 - L1MB3 LINE L1 0 6183 6129 1813 187 0 7 chr2 166215405 166215705 -87040878 - AluJo SINE Alu -14 298 1 3640 148 65 25 chr2 166215705 166216324 -87040259 - L1MB3 LINE L1 -54 6129 5479 1588 219 67 5 chr2 166216366 166216755 -87039828 - MLT1C LTR MaLR 0 467 55 387 177 0 25 chr2 166217280 166217359 -87039224 + MER103 DNA DNA 9 85 -81 1743 177 6 22 chr2 166217359 166217670 -87038913 + AluJo SINE Alu 1 306 -6 386 19 57 0 chr2 166217673 166217726 -87038857 + (GAAAA)n Simple_repeat Simple_repeat 4 59 0 2425 59 0 3 chr2 166217990 166218293 -87038290 - AluY SINE Alu -9 302 1 244 285 163 49 chr2 166219387 166219510 -87037073 - MIR SINE MIR -106 156 20 822 140 5 83 chr2 166220429 166220622 -87035961 + L1MC3 LINE L1 6835 7012 -773 293 89 10 198 chr2 166220722 166220758 -87035825 + L1MC3 LINE L1 7013 7022 -763 2221 81 0 3 chr2 166220758 166221073 -87035510 + AluSx SINE Alu 1 314 0 293 89 10 198 chr2 166221073 166221135 -87035448 + L1MC3 LINE L1 7022 7094 -691 258 319 0 11 chr2 166221136 166221230 -87035353 + MLT1F1 LTR MaLR 33 125 -442 2752 173 65 7 chr2 166221230 166221786 -87034797 + L1MC3 LINE L1 7190 7777 -8 23 68 0 0 chr2 166222221 166222265 -87034318 + AT_rich Low_complexity Low_complexity 1 44 0 3652 63 10 16 chr2 166223188 166223682 -87032901 + L1PB1 LINE L1 5661 6151 0 2083 120 0 3 chr2 166223838 166224130 -87032453 - AluSg1 SINE Alu -18 291 1 956 174 122 70 chr2 166224131 166224326 -87032257 + L1MB8 LINE L1 4847 5061 -1085 2057 137 3 9 chr2 166224326 166224641 -87031942 + AluSq SINE Alu 1 313 0 956 174 122 70 chr2 166224641 166224715 -87031868 + L1MB8 LINE L1 5061 5130 -1016 32811 105 10 45 chr2 166224737 166231109 -87025474 + L1PA7 LINE L1 12 6154 0 58 28 0 0 chr2 166231181 166231253 -87025330 + AT_rich Low_complexity Low_complexity 1 72 0 3597 172 57 36 chr2 166231264 166232043 -87024540 + L1MB8 LINE L1 5255 6049 -129 2130 112 26 10 chr2 166233568 166233872 -87022711 - AluSx SINE Alu -3 309 1 1813 129 187 8 chr2 166234086 166234449 -87022134 + MSTA LTR MaLR 1 428 0 1638 126 113 74 chr2 166235156 166235482 -87021101 + MER1B DNA MER1_type 1 339 0 1452 202 49 3 chr2 166236120 166236407 -87020176 - AluJo SINE Alu -12 300 1 2593 95 17 3 chr2 166236667 166237026 -87019557 + THE1B LTR MaLR 1 364 0 22 35 0 0 chr2 166238279 166238308 -87018275 + AT_rich Low_complexity Low_complexity 1 29 0 26 0 0 0 chr2 166238719 166238745 -87017838 + AT_rich Low_complexity Low_complexity 1 26 0 846 268 57 0 chr2 166238746 166238974 -87017609 - MIR SINE MIR -11 251 11 339 291 160 34 chr2 166239075 166239281 -87017302 + MIR SINE MIR 7 238 -24 3564 146 11 3 chr2 166240005 166240573 -87016010 + L1PA16 LINE L1 5519 6090 -76 182 384 52 35 chr2 166240716 166240888 -87015695 + L2 LINE L2 354 528 -2786 254 317 89 40 chr2 166241079 166241303 -87015280 + L2 LINE L2 2539 2773 -541 306 239 94 36 chr2 166241506 166241644 -87014939 + L1ME4a LINE L1 5944 6089 -32 26 0 0 0 chr2 166241845 166241871 -87014712 + AT_rich Low_complexity Low_complexity 1 26 0 2214 119 0 0 chr2 166241871 166242165 -87014418 - AluSx SINE Alu -18 294 1 597 180 47 39 chr2 166242638 166242766 -87013817 - FLAM_A SINE Alu -4 129 1 2212 129 0 0 chr2 166242793 166243102 -87013481 + AluSx SINE Alu 1 309 -3 1764 189 0 3 chr2 166243359 166243650 -87012933 + AluJb SINE Alu 2 291 -21 23 68 0 0 chr2 166244612 166244656 -87011927 + AT_rich Low_complexity Low_complexity 1 44 0 23 0 0 0 chr2 166244951 166244974 -87011609 + AT_rich Low_complexity Low_complexity 1 23 0 25 51 0 0 chr2 166245069 166245108 -87011475 + AT_rich Low_complexity Low_complexity 1 39 0 614 128 288 0 chr2 166245108 166245233 -87011350 - L1PA16 LINE L1 -6 6160 6000 318 351 0 9 chr2 166246404 166246518 -87010065 + L1ME4a LINE L1 3347 3459 -2687 710 271 76 17 chr2 166246549 166246785 -87009798 - MIR SINE MIR 0 262 13 941 187 0 5 chr2 166246823 166247021 -87009562 + L1MA6 LINE L1 6102 6298 -2 22 0 0 0 chr2 166247023 166247045 -87009538 + AT_rich Low_complexity Low_complexity 1 22 0 254 305 81 43 chr2 166247135 166247505 -87009078 + L1ME4a LINE L1 3595 3978 -2168 284 127 14 42 chr2 166247867 166247938 -87008645 - L1PA16 LINE L1 0 6166 6098 883 150 11 0 chr2 166247939 166248148 -87008435 - L1PA15 LINE L1 -105 6061 5808 247 196 98 20 chr2 166248185 166248287 -87008296 + L1ME4a LINE L1 4459 4568 -1578 1106 100 72 0 chr2 166248545 166248725 -87007858 - MER2 DNA MER2_type 0 345 153 567 109 0 76 chr2 166248850 166248942 -87007641 - FLAM_C SINE Alu -28 115 31 1600 187 31 7 chr2 166249110 166249404 -87007179 + AluJo SINE Alu 1 301 -11 2090 127 0 16 chr2 166249865 166250181 -87006402 - AluSx SINE Alu -1 311 1 779 196 0 7 chr2 166250208 166250361 -87006222 - FRAM SINE Alu -21 155 4 456 319 118 0 chr2 166250363 166250567 -87006016 + MIR SINE MIR 33 260 -2 720 265 112 3 chr2 166250573 166250860 -87005723 + L1ME4a LINE L1 5494 5811 -310 487 125 0 0 chr2 166250854 166250926 -87005657 + L1PB1 LINE L1 5704 5775 -376 * 230 111 44 0 chr2 166250929 166250974 -87005609 + LTR66 LTR ERVL 392 438 -172 214 191 16 16 chr2 166250994 166251057 -87005526 + (TATG)n Simple_repeat Simple_repeat 2 64 0 2563 84 3 16 chr2 166251057 166251425 -87005158 + L1PB1 LINE L1 5781 6143 -8 277 244 51 0 chr2 166251443 166251521 -87005062 + L1ME4a LINE L1 5838 5919 -202 261 241 111 19 chr2 166251610 166251718 -87004865 - MER112 DNA MER1_type -25 235 118 595 190 44 25 chr2 166251740 166251898 -87004685 - MER112 DNA MER1_type -91 169 9 1269 172 37 11 chr2 166252498 166252771 -87003812 - L1MB8 LINE L1 -6 6172 5893 587 170 0 20 chr2 166253503 166253603 -87002980 - FRAM SINE Alu -24 152 55 310 82 82 0 chr2 166253640 166253738 -87002845 + (TA)n Simple_repeat Simple_repeat 2 107 0 422 280 259 16 chr2 166253750 166253943 -87002640 - MIR SINE MIR -12 250 11 330 262 103 32 chr2 166254340 166254466 -87002117 + MLT1J LTR MaLR 311 445 -66 2169 128 0 3 chr2 166255279 166255585 -87000998 - AluSx SINE Alu -7 305 1 33 80 0 0 chr2 166257150 166257225 -86999358 + AT_rich Low_complexity Low_complexity 1 75 0 1477 78 0 5 chr2 166307387 166307578 -86949005 + AluY SINE Alu 116 305 -6 773 204 95 5 chr2 166307578 166307789 -86948794 + Charlie2 DNA MER1_type 2425 2654 -208 * 2946 188 94 7 chr2 166307787 166308057 -86948526 + L1MC4a LINE L1 6714 6959 -849 195 42 0 0 chr2 166308057 166308081 -86948502 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 2946 188 94 7 chr2 166308081 166308533 -86948050 + L1MC4a LINE L1 6959 7499 -309 898 229 81 0 chr2 166308650 166308908 -86947675 - Charlie2a DNA MER1_type -1117 1745 1467 1330 252 120 22 chr2 166308997 166309497 -86947086 - Charlie2a DNA MER1_type -2181 601 53 511 217 159 0 chr2 166309941 166310098 -86946485 - MIR SINE MIR -19 243 62 212 218 64 13 chr2 166310459 166310537 -86946046 - MIR SINE MIR -59 149 68 241 83 62 0 chr2 166310987 166311035 -86945548 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 4427 147 9 4 chr2 166311035 166312428 -86944155 - L1P5 LINE L1 -360 5791 4395 260 357 62 0 chr2 166312895 166313007 -86943576 - MIR SINE MIR -67 141 23 2735 10 0 3 chr2 166314004 166314306 -86942277 - AluYa5 SINE Alu -10 301 1 279 315 0 0 chr2 166314534 166314607 -86941976 - L2 LINE L2 0 3272 3200 1583 124 154 0 chr2 166314751 166315010 -86941573 + AluSg SINE Alu 1 299 -1 1549 111 33 0 chr2 166315050 166315293 -86941290 + L1PA10 LINE L1 5918 6168 0 220 277 15 46 chr2 166315546 166315611 -86940972 - MIR3 SINE MIR -8 200 138 237 33 0 0 chr2 166318086 166318116 -86938467 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 1177 157 10 102 chr2 166318145 166318450 -86938133 - MLT1B LTR MaLR 0 390 114 357 91 26 39 chr2 166318569 166318646 -86937937 + (TATATG)n Simple_repeat Simple_repeat 6 81 0 2535 75 3 47 chr2 166318651 166318911 -86937672 + L1PB1 LINE L1 5777 6016 -135 2440 64 0 0 chr2 166318911 166319207 -86937376 + AluY SINE Alu 1 296 -15 2535 75 3 47 chr2 166319207 166319330 -86937253 + L1PB1 LINE L1 6016 6143 -8 1178 220 0 16 chr2 166320032 166320277 -86936306 + AluJo SINE Alu 1 241 -71 1039 139 104 12 chr2 166320347 166320520 -86936063 - AluJb SINE Alu -21 291 103 27 29 0 0 chr2 166321608 166321642 -86934941 + AT_rich Low_complexity Low_complexity 1 34 0 307 366 45 73 chr2 166322243 166322489 -86934094 + L2 LINE L2 3024 3262 -10 1050 180 87 0 chr2 166322605 166322811 -86933772 - MER58A DNA MER1_type 0 224 1 939 263 77 39 chr2 166323126 166323594 -86932989 + LTR33 LTR ERVL 36 521 0 306 258 54 11 chr2 166324455 166324548 -86932035 - MIR SINE MIR -110 152 56 26 0 0 0 chr2 166325453 166325479 -86931104 + AT_rich Low_complexity Low_complexity 1 26 0 370 228 11 0 chr2 166325743 166325835 -86930748 + LTR67 LTR ERVL 117 209 -348 1840 198 42 32 chr2 166325842 166326337 -86930246 + MLT1D LTR MaLR 6 505 0 292 323 32 0 chr2 166326338 166326431 -86930152 + LTR67 LTR ERVL 208 303 -254 295 299 47 0 chr2 166326529 166326636 -86929947 + LTR67 LTR ERVL 440 551 -6 381 242 216 39 chr2 166327007 166327160 -86929423 + MER5A DNA MER1_type 9 188 -1 205 339 209 26 chr2 166327171 166327286 -86929297 - L2 LINE L2 -220 3052 2917 319 233 47 39 chr2 166328007 166328136 -86928447 - LTR67 LTR ERVL 0 557 428 196 321 91 43 chr2 166329558 166329745 -86926838 + MIR SINE MIR 35 230 -32 32 0 0 0 chr2 166330776 166330808 -86925775 + AT_rich Low_complexity Low_complexity 1 32 0 1978 140 7 0 chr2 166331457 166331743 -86924840 + AluSx SINE Alu 1 288 -24 294 273 141 16 chr2 166332816 166332944 -86923639 - MLT1J LTR MaLR -144 367 224 523 276 125 39 chr2 166333637 166333869 -86922714 + MIR SINE MIR 5 256 -6 251 91 0 23 chr2 166333873 166333917 -86922666 + (CACCAT)n Simple_repeat Simple_repeat 1 43 0 255 302 24 56 chr2 166333970 166334096 -86922487 + L2 LINE L2 3095 3216 -56 1761 163 37 0 chr2 166335463 166335733 -86920850 + AluJb SINE Alu 1 280 -32 1759 182 14 3 chr2 166336323 166336619 -86919964 + AluJb SINE Alu 1 299 -13 1819 163 0 23 chr2 166336665 166336965 -86919618 - AluJo SINE Alu -19 293 1 270 234 0 0 chr2 166337350 166337414 -86919169 - L1M4 LINE L1 -2198 3948 3885 231 241 18 107 chr2 166337453 166337565 -86919018 - MER102b DNA MER1_type -32 309 208 46 0 0 0 chr2 166337601 166337647 -86918936 + AT_rich Low_complexity Low_complexity 1 46 0 737 102 0 0 chr2 166337840 166337938 -86918645 + AluS SINE Alu 1 98 -215 212 255 0 0 chr2 166337949 166337996 -86918587 + (TATG)n Simple_repeat Simple_repeat 2 48 0 322 122 0 56 chr2 166339268 166339358 -86917225 + (GAA)n Simple_repeat Simple_repeat 2 86 0 493 212 32 3 chr2 166339846 166340472 -86916111 + (TA)n Simple_repeat Simple_repeat 1 643 0 310 207 30 0 chr2 166340484 166340648 -86915935 + (TA)n Simple_repeat Simple_repeat 1 169 0 585 142 35 0 chr2 166340801 166340970 -86915613 + (TA)n Simple_repeat Simple_repeat 1 175 0 547 244 138 12 chr2 166341772 166341932 -86914651 - MIR SINE MIR -75 187 8 333 285 171 8 chr2 166342119 166342242 -86914341 - MIR SINE MIR -82 180 38 2476 82 0 9 chr2 166342657 166342973 -86913610 + AluSq SINE Alu 1 313 0 275 306 218 7 chr2 166343309 166343456 -86913127 + MIR3 SINE MIR 27 204 -4 2201 127 3 0 chr2 166343521 166343829 -86912754 + AluSx SINE Alu 1 309 -3 1107 199 5 5 chr2 166345658 166345869 -86910714 + AluJb SINE Alu 85 295 -17 5459 128 34 17 chr2 166346076 166347081 -86909502 - L1MA8 LINE L1 -3 6288 5267 1115 153 153 30 chr2 166347261 166347523 -86909060 + MER7A DNA MER2_type 55 346 0 3696 133 2 5 chr2 166347523 166348153 -86908430 - L1MA8 LINE L1 -878 5268 4641 188 314 0 29 chr2 166348875 166348945 -86907638 - L2 LINE L2 -32 3240 3173 195 272 173 25 chr2 166351575 166351656 -86904927 - L2 LINE L2 -6 3266 3174 375 261 102 0 chr2 166351788 166351945 -86904638 + L1ME4a LINE L1 5943 6115 -6 2644 58 0 0 chr2 166352337 166352680 -86903903 + L1PA6 LINE L1 5782 6124 -30 497 196 78 0 chr2 166353177 166353279 -86903304 - L1PB4 LINE L1 -13 6143 6034 2246 127 0 0 chr2 166353345 166353652 -86902931 + AluSc SINE Alu 1 307 -2 968 172 0 0 chr2 166354524 166354675 -86901908 - FRAM SINE Alu -24 152 2 951 175 155 0 chr2 166356347 166356541 -86900042 + MER58A DNA MER1_type 1 224 0 2141 123 7 3 chr2 166357089 166357389 -86899194 - AluSx SINE Alu -11 301 1 266 270 90 0 chr2 166357478 166357589 -86898994 - L1MA4 LINE L1 -2 6298 6178 220 256 0 64 chr2 166357721 166357799 -86898784 + MIR SINE MIR 121 193 -69 30 0 0 0 chr2 166359289 166359319 -86897264 + AT_rich Low_complexity Low_complexity 1 30 0 4549 19 2 2 chr2 166359319 166359846 -86896737 - L1PA3 LINE L1 -3 6152 5626 872 166 34 23 chr2 166360183 166360358 -86896225 + MER97c DNA MER1_type? 8 184 -906 200 132 26 0 chr2 166362139 166362177 -86894406 + (CATAA)n Simple_repeat Simple_repeat 2 40 0 429 254 100 23 chr2 166362204 166362334 -86894249 + MIR SINE MIR 21 160 -102 25 51 0 0 chr2 166362334 166362373 -86894210 + AT_rich Low_complexity Low_complexity 1 39 0 189 107 0 0 chr2 166362499 166362527 -86894056 + (A)n Simple_repeat Simple_repeat 1 28 0 246 304 60 50 chr2 166363254 166363455 -86893128 + L2 LINE L2 3111 3313 0 804 251 149 54 chr2 166364094 166364591 -86891992 + L1MC4a LINE L1 5426 5969 -152 21 36 0 0 chr2 166364692 166364720 -86891863 + AT_rich Low_complexity Low_complexity 1 28 0 360 355 65 5 chr2 166366437 166366637 -86889946 + MIR SINE MIR 48 259 -3 278 258 142 58 chr2 166367385 166367540 -86889043 - MIR SINE MIR -94 168 1 216 0 0 0 chr2 166367680 166367704 -86888879 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2003 107 7 4 chr2 166367708 166367988 -86888595 - AluSx SINE Alu -30 282 2 322 228 63 0 chr2 166367995 166368074 -86888509 + MIR SINE MIR 102 185 -77 210 37 0 0 chr2 166368369 166368396 -86888187 + (TA)n Simple_repeat Simple_repeat 2 28 0 27 62 0 0 chr2 166369247 166369295 -86887288 + AT_rich Low_complexity Low_complexity 1 48 0 39 38 0 0 chr2 166369405 166369458 -86887125 + AT_rich Low_complexity Low_complexity 1 53 0 1515 117 133 15 chr2 166371270 166371534 -86885049 - MER1B DNA MER1_type -9 330 36 793 224 56 0 chr2 166372409 166372605 -86883978 - MER3 DNA MER1_type -2 207 1 1486 16 0 33 chr2 166373697 166373881 -86882702 + L1PA2 LINE L1 5977 6154 -1 2067 121 75 29 chr2 166374536 166374884 -86881699 + THE1B LTR MaLR 1 364 0 1034 172 32 16 chr2 166375257 166375443 -86881140 - MER5A DNA MER1_type 0 189 1 23 0 0 0 chr2 166376193 166376216 -86880367 + AT_rich Low_complexity Low_complexity 1 23 0 294 266 51 13 chr2 166377539 166377618 -86878965 - L2 LINE L2 -52 3261 3180 210 26 77 0 chr2 166377696 166377735 -86878848 + (TA)n Simple_repeat Simple_repeat 2 43 0 351 0 0 0 chr2 166377801 166377840 -86878743 + (CA)n Simple_repeat Simple_repeat 1 39 0 1996 105 0 15 chr2 166377914 166378181 -86878402 + AluSx SINE Alu 50 312 0 919 192 6 0 chr2 166378822 166378978 -86877605 + FAM SINE Alu 1 157 -18 312 313 165 16 chr2 166379013 166379195 -86877388 + MIR SINE MIR 53 261 -1 764 249 21 10 chr2 166379379 166379572 -86877011 + MIR SINE MIR 37 231 -31 27 29 0 0 chr2 166379651 166379685 -86876898 + AT_rich Low_complexity Low_complexity 1 34 0 532 188 35 41 chr2 166379746 166379817 -86876766 + L1M4 LINE L1 4487 4557 -1589 1634 180 27 23 chr2 166379817 166380117 -86876466 - AluJo SINE Alu -11 301 1 532 188 35 41 chr2 166380117 166380215 -86876368 + L1M4 LINE L1 4557 4655 -1491 25 83 0 0 chr2 166380230 166380290 -86876293 + AT_rich Low_complexity Low_complexity 1 60 0 277 228 30 40 chr2 166381484 166381585 -86874998 + (TATATG)n Simple_repeat Simple_repeat 3 102 0 354 276 217 20 chr2 166381801 166381953 -86874630 - MIR3 SINE MIR -25 183 2 269 296 28 9 chr2 166382371 166382479 -86874104 + MIR3 SINE MIR 84 193 -15 772 211 84 6 chr2 166382628 166382794 -86873789 + MER5A DNA MER1_type 3 181 -8 934 264 19 8 chr2 166382908 166383166 -86873417 + MIR SINE MIR 2 262 0 1990 155 90 55 chr2 166383604 166384095 -86872488 + LTR54 LTR ERV1 3 510 0 198 349 58 0 chr2 166384136 166384222 -86872361 + L2 LINE L2 1818 1908 -1406 354 292 56 28 chr2 166384776 166384920 -86871663 + MIR SINE MIR 1 148 -114 195 355 108 0 chr2 166387047 166387140 -86869443 + MIR SINE MIR 35 137 -71 552 227 15 0 chr2 166387608 166387740 -86868843 - Charlie4 DNA MER1_type -4 1957 1824 1012 160 6 17 chr2 166388612 166388787 -86867796 - FAM SINE Alu -2 173 1 312 248 49 14 chr2 166388927 166389022 -86867561 + MIR SINE MIR 44 123 -85 531 270 225 0 chr2 166389735 166389913 -86866670 + MIR SINE MIR 2 219 -43 227 204 0 0 chr2 166391213 166391257 -86865326 + (CAA)n Simple_repeat Simple_repeat 2 45 0 2318 103 0 0 chr2 166391355 166391647 -86864936 - AluSx SINE Alu -20 292 1 325 302 90 94 chr2 166394865 166395332 -86861251 + L1M2 LINE L1 653 1117 -5732 188 222 133 22 chr2 166396238 166396328 -86860255 - L2 LINE L2 -5 3308 3209 1635 168 83 30 chr2 166396355 166396885 -86859698 + MLT2A2 LTR ERVL 1 554 0 369 303 37 0 chr2 166397299 166397408 -86859175 + L2 LINE L2 3201 3313 0 288 331 138 19 chr2 166397419 166397579 -86859004 + L2 LINE L2 2571 2749 -565 2269 95 3 3 chr2 166397778 166398074 -86858509 - AluSp SINE Alu -17 296 1 537 313 59 47 chr2 166398441 166398697 -86857886 + L2 LINE L2 3005 3263 -50 406 298 60 20 chr2 166398932 166399083 -86857500 - MIR SINE MIR -35 227 71 21 0 0 0 chr2 166399208 166399229 -86857354 + AT_rich Low_complexity Low_complexity 1 21 0 973 237 95 61 chr2 166399377 166399954 -86856629 - L1ME3A LINE L1 -220 5950 5354 683 222 101 110 chr2 166399975 166400501 -86856082 + LTR33A LTR ERVL 1 521 -2 363 347 85 17 chr2 166401086 166401735 -86854848 - L1ME3A LINE L1 -927 5219 4527 324 368 70 5 chr2 166401837 166402022 -86854561 - L2 LINE L2 -565 2749 2553 238 266 56 49 chr2 166402207 166402244 -86854339 + L2 LINE L2 2933 2968 -304 2222 81 41 0 chr2 166402244 166402539 -86854044 - AluSq SINE Alu -6 307 1 238 266 56 49 chr2 166402539 166402644 -86853939 + L2 LINE L2 2968 3076 -196 254 95 24 0 chr2 166403352 166403394 -86853189 + (TG)n Simple_repeat Simple_repeat 2 44 0 707 281 49 31 chr2 166403981 166404330 -86852253 - LTR16C LTR ERVL -65 426 72 514 255 67 20 chr2 166405700 166405849 -86850734 + MIR SINE MIR 107 262 0 228 338 99 73 chr2 166406248 166406520 -86850063 - L2 LINE L2 -470 2844 2566 245 333 212 23 chr2 166407410 166407882 -86848701 - L2 LINE L2 -723 2591 2031 27 73 0 0 chr2 166408010 166408065 -86848518 + AT_rich Low_complexity Low_complexity 1 55 0 416 236 47 20 chr2 166408226 166408374 -86848209 + HsTC2 DNA Tc2 1725 1876 -22 285 146 0 0 chr2 166408366 166408414 -86848169 - Charlie7 DNA MER1_type -2520 92 45 * 2404 92 0 13 chr2 166408443 166408758 -86847825 + AluSx SINE Alu 1 311 -1 486 279 158 9 chr2 166408975 166409190 -86847393 - MIR SINE MIR -11 251 5 313 301 141 69 chr2 166409355 166409966 -86846617 - L2 LINE L2 -1611 1703 1049 272 341 67 22 chr2 166410203 166410338 -86846245 + MLT2E LTR ERVL 32 172 -456 489 269 62 43 chr2 166410693 166410901 -86845682 - LTR67 LTR ERVL -2 555 344 2255 99 0 7 chr2 166410917 166411211 -86845372 - AluSg SINE Alu -18 292 1 273 314 81 41 chr2 166411213 166411385 -86845198 - LTR67 LTR ERVL -377 180 2 204 97 0 0 chr2 166411399 166411430 -86845153 + (TG)n Simple_repeat Simple_repeat 2 32 0 1626 150 20 10 chr2 166411895 166412201 -86844382 + MER4B LTR ERV1 299 607 -3 2272 101 0 13 chr2 166412513 166412819 -86843764 - AluSc SINE Alu -7 302 1 2393 143 44 12 chr2 166413224 166413637 -86842946 + MSTB LTR MaLR 1 426 0 843 193 25 35 chr2 166413852 166414054 -86842529 + MER20 DNA MER1_type 1 200 -19 291 271 24 12 chr2 166414063 166414148 -86842435 + L2 LINE L2 2695 2780 -534 783 338 106 26 chr2 166414782 166415388 -86841195 + L2 LINE L2 2317 2970 -344 318 289 22 11 chr2 166415512 166415602 -86840981 + L2 LINE L2 3134 3224 -48 196 294 0 0 chr2 166415914 166415965 -86840618 + MIR SINE MIR 76 126 -136 532 274 30 36 chr2 166416525 166416693 -86839890 + MER5B DNA MER1_type 12 178 0 7043 52 7 0 chr2 166417093 166418205 -86838378 + L1PA7 LINE L1 5034 6151 -3 4270 178 33 20 chr2 166418388 166419565 -86837018 + L1MB4 LINE L1 4973 6165 -15 5655 96 28 28 chr2 166419888 166419950 -86836633 - L1MC1 LINE L1 -3 6330 6269 1815 128 16 0 chr2 166419950 166420201 -86836382 + AluSx SINE Alu 36 290 -22 5655 96 28 28 chr2 166420201 166421053 -86835530 - L1MC1 LINE L1 -63 6270 5416 295 361 54 25 chr2 166421091 166421287 -86835296 + MIR SINE MIR 4 210 -52 2187 160 36 16 chr2 166421287 166421730 -86834853 + L1MB2 LINE L1 5720 6171 0 295 361 54 25 chr2 166421730 166421774 -86834809 + MIR SINE MIR 210 251 -11 318 271 0 0 chr2 166422309 166422416 -86834167 + (CA)n Simple_repeat Simple_repeat 2 108 0 486 155 3 180 chr2 166424631 166424719 -86831864 + L1MA10 LINE L1 6052 6073 -261 2120 107 3 3 chr2 166424719 166425009 -86831574 - AluSx SINE Alu -22 290 1 486 155 3 180 chr2 166425009 166425157 -86831426 + L1MA10 LINE L1 6073 6245 -89 2797 39 0 0 chr2 166425947 166426278 -86830305 + L1PA7 LINE L1 5821 6151 -3 260 307 55 47 chr2 166426354 166426481 -86830102 + L3 LINE CR1 902 1029 -548 249 33 0 0 chr2 166426641 166426671 -86829912 + (CA)n Simple_repeat Simple_repeat 1 30 0 21 0 0 0 chr2 166427808 166427829 -86828754 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 166428068 166428089 -86828494 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 166428222 166428244 -86828339 + AT_rich Low_complexity Low_complexity 1 22 0 1691 169 69 31 chr2 166428531 166428881 -86827702 + MLT1A1 LTR MaLR 3 365 0 517 283 52 13 chr2 166429433 166429619 -86826964 + MIR SINE MIR 31 220 -42 272 131 16 0 chr2 166430349 166430410 -86826173 - L1MA8 LINE L1 -10 6281 6220 238 363 88 0 chr2 166430423 166430514 -86826069 + L2 LINE L2 3169 3267 -5 194 303 166 21 chr2 166430541 166430686 -86825897 - L3b LINE CR1 -169 1414 1249 423 254 10 83 chr2 166430712 166430917 -86825666 + L2 LINE L2 3063 3252 -61 204 318 0 0 chr2 166431488 166431551 -86825032 + (CA)n Simple_repeat Simple_repeat 2 64 0 197 0 0 67 chr2 166432788 166432818 -86823765 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 2111 100 43 20 chr2 166432818 166433119 -86823464 + AluY SINE Alu 1 308 -3 298 327 37 0 chr2 166433850 166433957 -86822626 + MIR3 SINE MIR 87 197 -11 360 256 327 18 chr2 166434075 166434243 -86822340 + MIR SINE MIR 29 248 -14 465 147 0 55 chr2 166435132 166435241 -86821342 + L1PA8 LINE L1 6070 6172 0 282 116 0 0 chr2 166436366 166436409 -86820174 + (TG)n Simple_repeat Simple_repeat 2 44 0 1764 155 21 17 chr2 166436576 166436867 -86819716 - AluJb SINE Alu -20 292 1 1083 183 191 12 chr2 166436882 166437128 -86819455 - AluJo SINE Alu -11 291 2 243 299 115 11 chr2 166437432 166437519 -86819064 - MER5A DNA MER1_type -30 159 64 255 217 133 0 chr2 166437662 166437745 -86818838 + MER103 DNA DNA 71 164 -2 371 269 237 9 chr2 166438230 166438449 -86818134 + L3 LINE CR1 1232 1500 -77 195 265 44 0 chr2 166439409 166439477 -86817106 - MIR SINE MIR -64 198 128 187 231 0 58 chr2 166439512 166439564 -86817019 + L2 LINE L2 3264 3312 -1 * 364 250 58 10 chr2 166439553 166439657 -86816926 - MIR SINE MIR -128 134 26 443 324 77 6 chr2 166440238 166440408 -86816175 + MIR3 SINE MIR 16 197 -11 225 154 0 0 chr2 166440717 166440756 -86815827 + (CA)n Simple_repeat Simple_repeat 2 40 0 1250 233 106 6 chr2 166440965 166441304 -86815279 + MER70A LTR ERVL 4 376 -96 2221 125 0 0 chr2 166441510 166441821 -86814762 - AluSx SINE Alu -1 311 1 266 213 0 0 chr2 166441945 166441992 -86814591 - L2 LINE L2 -11 3302 3256 260 312 60 134 chr2 166443227 166443525 -86813058 - L2 LINE L2 -3 3269 2994 263 299 92 29 chr2 166444445 166444619 -86811964 + MIR SINE MIR 27 211 -51 214 250 15 15 chr2 166445492 166445560 -86811023 + CT-rich Low_complexity Low_complexity 2 69 0 499 261 68 17 chr2 166445619 166445795 -86810788 - MIR SINE MIR -30 232 48 * 576 265 66 19 chr2 166445789 166446000 -86810583 - MIR SINE MIR -6 256 36 6877 22 0 1 chr2 166446396 166447230 -86809353 - L1PA3 LINE L1 -2 6153 5321 3892 30 0 0 chr2 166447214 166447707 -86808876 + L1P LINE L1 4259 4751 -1395 * 2772 219 69 69 chr2 166448320 166448385 -86808198 + L1MC5 LINE L1 6538 6601 -1360 252 0 0 0 chr2 166448385 166448413 -86808170 + (CA)n Simple_repeat Simple_repeat 2 29 0 2772 219 69 69 chr2 166448413 166449653 -86806930 + L1MC5 LINE L1 6601 7857 -104 304 167 36 0 chr2 166449811 166449895 -86806688 + L1MC1 LINE L1 6141 6227 -106 679 163 75 12 chr2 166450702 166450862 -86805721 - L1MC1 LINE L1 -23 6310 6141 * 8116 141 61 37 chr2 166450859 166450913 -86805670 - L1MCa LINE L1 -4321 2105 2054 205 29 59 0 chr2 166450913 166450947 -86805636 + (TCTA)n Simple_repeat Simple_repeat 2 37 0 8116 141 61 37 chr2 166450947 166452843 -86803740 - L1MCa LINE L1 -4372 2054 18 662 258 154 34 chr2 166453179 166453412 -86803171 - MIR SINE MIR 0 262 2 245 324 112 41 chr2 166453472 166453642 -86802941 + L2 LINE L2 2712 2893 -421 1401 158 143 60 chr2 166453867 166454202 -86802381 + MLT1A1 LTR MaLR 1 363 -2 557 321 64 57 chr2 166454492 166455137 -86801446 + L1ME4a LINE L1 25 673 -5446 428 259 91 62 chr2 166455203 166455620 -86800963 + L1ME4a LINE L1 776 1204 -4915 1071 305 49 25 chr2 166456050 166456922 -86799661 + L1ME4a LINE L1 2093 2985 -3144 489 242 0 10 chr2 166457173 166457272 -86799311 + MER5A DNA MER1_type 9 106 -83 332 280 108 33 chr2 166457332 166457546 -86799037 + L1ME4a LINE L1 3729 3958 -2171 305 301 134 33 chr2 166457734 166458010 -86798573 + L1ME4a LINE L1 4894 5197 -932 263 291 61 20 chr2 166458141 166458289 -86798294 + L1ME4a LINE L1 5357 5510 -594 304 297 63 26 chr2 166458373 166458698 -86797885 + L1ME4a LINE L1 5661 5998 -106 337 314 48 0 chr2 166458785 166458909 -86797674 + MER94 DNA DNA 1 130 -4 1772 147 72 0 chr2 166459783 166460046 -86796537 + AluJb SINE Alu 1 287 -25 310 51 0 0 chr2 166460046 166460085 -86796498 + (CAAA)n Simple_repeat Simple_repeat 2 160 0 1772 147 72 0 chr2 166460085 166460100 -86796483 + AluJb SINE Alu 287 299 -13 1602 132 10 34 chr2 166461904 166462199 -86794384 + LTR1 LTR ERV1 16 303 -482 5243 170 30 31 chr2 166462206 166462634 -86793949 + L1MB3 LINE L1 4364 4791 -1392 1855 164 0 13 chr2 166462634 166462946 -86793637 + AluJo SINE Alu 1 308 -4 5243 170 30 31 chr2 166462946 166464340 -86792243 + L1MB3 LINE L1 4791 6182 -1 1908 164 0 7 chr2 166464437 166464741 -86791842 + AluJo SINE Alu 5 306 -6 202 293 0 0 chr2 166466137 166466178 -86790405 + L2 LINE L2 3216 3256 -16 261 98 0 0 chr2 166466551 166466592 -86789991 + (TG)n Simple_repeat Simple_repeat 1 41 0 2315 110 3 0 chr2 166467234 166467544 -86789039 + AluSx SINE Alu 1 311 -1 22 70 0 0 chr2 166468167 166468210 -86788373 + AT_rich Low_complexity Low_complexity 1 43 0 471 62 0 0 chr2 166468263 166468315 -86788268 + (TC)n Simple_repeat Simple_repeat 2 56 -10 369 0 0 0 chr2 166468315 166468356 -86788227 + (TG)n Simple_repeat Simple_repeat 2 42 0 471 62 0 0 chr2 166468356 166468368 -86788215 + (TC)n Simple_repeat Simple_repeat 55 66 0 454 270 184 6 chr2 166468407 166468581 -86788002 + MIR SINE MIR 12 216 -46 185 306 111 0 chr2 166468683 166468755 -86787828 - MIR SINE MIR -84 124 45 216 97 0 0 chr2 166468821 166468852 -86787731 + (T)n Simple_repeat Simple_repeat 1 31 0 296 143 0 0 chr2 166469001 166469043 -86787540 + 5S rRNA rRNA 1 42 -79 2285 120 3 0 chr2 166470409 166470718 -86785865 + AluSx SINE Alu 1 310 -2 252 43 43 21 chr2 166470916 166470963 -86785620 + (GA)n Simple_repeat Simple_repeat 1 48 0 265 310 203 5 chr2 166471385 166471572 -86785011 - MIR SINE MIR -2 260 37 937 220 22 0 chr2 166471621 166471803 -86784780 - MER5A DNA MER1_type -3 186 1 693 284 213 35 chr2 166473524 166474278 -86782305 + L2 LINE L2 2362 3264 -49 3043 107 41 2 chr2 166474666 166475078 -86781505 + MSTC LTR MaLR 1 428 0 3999 125 35 25 chr2 166475352 166475999 -86780584 + L1PB4 LINE L1 5490 6143 -13 4955 228 26 68 chr2 166477348 166477384 -86779199 + L1M2a LINE L1 401 437 -7129 3839 127 83 5 chr2 166477384 166477973 -86778610 + MER41B LTR ERV1 1 635 0 4955 228 26 68 chr2 166477973 166479339 -86777244 + L1M2a LINE L1 437 1744 -5822 1144 223 57 97 chr2 166479339 166479445 -86777138 + L1M2a LINE L1 3069 3178 -4387 763 199 81 0 chr2 166479445 166479611 -86776972 + FRAM SINE Alu 1 44 0 1144 223 57 97 chr2 166479611 166480097 -86776486 + L1M2a LINE L1 3178 3640 -3925 905 249 28 21 chr2 166480097 166480382 -86776201 + L1MA9 LINE L1 5996 6282 -30 2113 81 18 0 chr2 166481079 166481352 -86775231 + AluSq SINE Alu 1 278 -35 365 242 17 33 chr2 166481474 166481594 -86774989 + GA-rich Low_complexity Low_complexity 2 119 0 21 71 0 0 chr2 166482067 166482109 -86774474 + AT_rich Low_complexity Low_complexity 1 42 0 572 282 0 0 chr2 166484198 166484329 -86772254 - MER94 DNA DNA -1 133 3 353 284 82 15 chr2 166485356 166485490 -86771093 + L1ME4a LINE L1 5555 5697 -424 336 297 0 0 chr2 166485570 166485681 -86770902 + L1ME4a LINE L1 5800 5910 -211 759 250 83 13 chr2 166485689 166485917 -86770666 - MIR SINE MIR -3 259 16 1986 149 0 16 chr2 166485978 166486293 -86770290 - AluSx SINE Alu -2 310 1 273 206 41 52 chr2 166486376 166486473 -86770110 + L1ME4a LINE L1 6006 6101 -20 604 178 68 20 chr2 166488248 166488394 -86768189 - MER103 DNA DNA -11 155 3 1238 181 9 14 chr2 166488877 166489098 -86767485 + AluJo SINE Alu 1 220 -92 1768 127 81 0 chr2 166489118 166489402 -86767181 + MER46B DNA MER2_type 55 236 0 509 271 65 7 chr2 166489548 166489703 -86766880 + LTR16A LTR ERVL 106 269 -181 251 122 0 0 chr2 166489981 166490022 -86766561 - L1M4 LINE L1 -2506 3640 3600 689 305 154 27 chr2 166490063 166490512 -86766071 + L2 LINE L2 1884 2389 -925 774 115 0 0 chr2 166490593 166490697 -86765886 + MER76 LTR ERV 1 104 -584 1526 195 42 47 chr2 166490812 166491197 -86765386 + MER76 LTR ERV 306 688 0 665 331 76 24 chr2 166491199 166491568 -86765015 + L2 LINE L2 2507 2894 -420 589 237 12 41 chr2 166491666 166491835 -86764748 - MER97b DNA MER1_type? -878 175 12 628 267 140 38 chr2 166491869 166492184 -86764399 + L2 LINE L2 2967 3313 0 266 338 25 31 chr2 166492266 166492426 -86764157 - L2 LINE L2 -1516 1798 1640 826 228 18 0 chr2 166492435 166492602 -86763981 - MER5A DNA MER1_type -19 170 1 396 288 59 59 chr2 166492614 166492951 -86763632 - L2 LINE L2 -1736 1578 1242 2116 112 7 0 chr2 166493034 166493312 -86763271 - AluSx SINE Alu -32 280 1 315 294 73 29 chr2 166494636 166494772 -86761811 + MER5A DNA MER1_type 26 167 -22 192 125 0 0 chr2 166494972 166495004 -86761579 + (CTG)n Simple_repeat Simple_repeat 1 32 0 523 329 46 42 chr2 166495024 166495264 -86761319 - MIR SINE MIR -19 243 3 588 249 114 102 chr2 166496734 166496939 -86759644 - L2 LINE L2 0 3313 3112 381 43 0 0 chr2 166496939 166496986 -86759597 + (TG)n Simple_repeat Simple_repeat 1 47 0 588 249 114 102 chr2 166496986 166497476 -86759107 - L2 LINE L2 -201 3112 2602 242 296 0 0 chr2 166498052 166498123 -86758460 + L2 LINE L2 3159 3229 -43 375 78 0 0 chr2 166498167 166498218 -86758365 + (TGGA)n Simple_repeat Simple_repeat 2 52 0 399 254 162 12 chr2 166501272 166501445 -86755138 + MIR SINE MIR 12 210 -52 1860 151 0 24 chr2 166501978 166502270 -86754313 - AluJb SINE Alu -27 285 1 1001 271 123 40 chr2 166502537 166502936 -86753647 - MER45C DNA AcHobo -521 432 1 195 256 0 0 chr2 166503033 166503076 -86753507 + MIR SINE MIR 116 158 -104 841 138 8 0 chr2 166503079 166503202 -86753381 + FLAM_C SINE Alu 1 124 -19 26 30 0 0 chr2 166503203 166503236 -86753347 + AT_rich Low_complexity Low_complexity 1 33 0 25 0 0 0 chr2 166503287 166503312 -86753271 + AT_rich Low_complexity Low_complexity 1 25 0 281 211 239 49 chr2 166504573 166504715 -86751868 + MIR SINE MIR 40 208 -54 668 239 67 50 chr2 166505029 166505267 -86751316 - MER112 DNA MER1_type -5 255 14 322 337 40 40 chr2 166505292 166505494 -86751089 + L2 LINE L2 716 917 -2397 290 280 201 28 chr2 166506365 166506579 -86750004 + L2 LINE L2 2872 3122 -150 851 249 215 19 chr2 166506697 166507107 -86749476 + LTR16C LTR ERVL 2 491 0 3736 120 15 19 chr2 166507695 166508220 -86748363 - MER1A DNA MER1_type -4 523 1 777 244 17 0 chr2 166508366 166508538 -86748045 - MIR SINE MIR -87 175 1 2990 76 0 0 chr2 166508563 166508918 -86747665 - THE1A LTR MaLR 0 355 1 267 333 12 0 chr2 166509233 166509317 -86747266 + MIR3 SINE MIR 119 203 -5 192 133 0 0 chr2 166510278 166510308 -86746275 + L2 LINE L2 3276 3305 -8 2054 112 0 3 chr2 166510413 166510718 -86745865 + AluJb SINE Alu 1 304 -8 23 33 0 0 chr2 166510954 166510984 -86745599 + GC_rich Low_complexity Low_complexity 1 30 0 237 132 0 0 chr2 166511286 166511324 -86745259 + (CAG)n Simple_repeat Simple_repeat 1 38 0 271 306 46 28 chr2 166512029 166512137 -86744446 - MIR SINE MIR -68 194 85 2373 66 0 17 chr2 166562932 166563234 -86693349 + AluY SINE Alu 1 297 -14 2154 107 3 0 chr2 166563533 166563822 -86692761 - AluSx SINE Alu -22 290 1 520 267 6 50 chr2 166563822 166563983 -86692600 + MIR SINE MIR 79 232 -30 243 61 0 0 chr2 166564306 166564339 -86692244 + (TC)n Simple_repeat Simple_repeat 2 34 0 346 306 153 23 chr2 166564530 166564837 -86691746 + L1ME3A LINE L1 5531 5877 -293 418 136 25 0 chr2 166564906 166564987 -86691596 + L1MB4 LINE L1 6098 6180 0 238 149 0 0 chr2 166565097 166565144 -86691439 - LTR66 LTR ERVL -170 440 394 2361 85 3 3 chr2 166565361 166565667 -86690916 - AluSq SINE Alu -7 306 1 207 0 0 0 chr2 166566242 166566265 -86690318 + (CAAAAA)n Simple_repeat Simple_repeat 4 26 0 211 191 0 0 chr2 166567195 166567237 -86689346 + C-rich Low_complexity Low_complexity 6 47 0 231 114 0 0 chr2 166567940 166567975 -86688608 + (T)n Simple_repeat Simple_repeat 1 35 0 180 97 0 0 chr2 166567999 166568030 -86688553 + (T)n Simple_repeat Simple_repeat 1 31 0 881 236 46 49 chr2 166569452 166569779 -86686804 - MER46C DNA MER2_type -9 329 4 211 344 141 8 chr2 166570189 166570317 -86686266 + L2 LINE L2 3128 3272 0 2177 120 0 13 chr2 166570432 166570732 -86685851 + AluSx SINE Alu 1 296 -16 196 349 0 16 chr2 166572027 166572090 -86684493 - L2 LINE L2 -6 3307 3246 373 287 70 21 chr2 166574194 166574337 -86682246 - MIR SINE MIR -112 150 1 829 228 103 61 chr2 166574511 166574919 -86681664 - MLT1C LTR MaLR -42 425 1 213 186 34 51 chr2 166574932 166574991 -86681592 + MIR SINE MIR 163 220 -42 1914 223 10 24 chr2 166575914 166576416 -86680167 + Charlie4a DNA MER1_type 13 507 -1 324 280 157 66 chr2 166576998 166577316 -86679267 + Tigger8 DNA MER2_type 68 414 -252 243 0 0 0 chr2 166578173 166578200 -86678383 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 22 0 0 0 chr2 166579427 166579449 -86677134 + GC_rich Low_complexity Low_complexity 1 22 0 301 306 184 35 chr2 166580058 166580401 -86676182 - L3 LINE CR1 -67 1510 1117 292 209 23 0 chr2 166580609 166580695 -86675888 + L1ME4a LINE L1 5838 5925 -196 1517 196 23 13 chr2 166580719 166581020 -86675563 + AluJo SINE Alu 1 304 -8 195 42 0 0 chr2 166582059 166582083 -86674500 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 271 230 90 0 chr2 166583229 166583329 -86673254 - L1MC4 LINE L1 -217 7825 7717 542 222 0 0 chr2 166583332 166583449 -86673134 - L1MC4 LINE L1 -401 7641 7525 489 158 0 11 chr2 166583575 166583670 -86672913 + (CCA)n Simple_repeat Simple_repeat 1 94 0 1366 187 0 32 chr2 166584176 166584427 -86672156 - AluJo SINE Alu -69 243 1 188 146 0 42 chr2 166587510 166587558 -86669025 + (TATATG)n Simple_repeat Simple_repeat 2 47 0 196 186 23 0 chr2 166589897 166589940 -86666643 + MIR SINE MIR 110 153 -109 598 251 23 59 chr2 166590969 166591191 -86665392 - MIR SINE MIR 0 262 53 1022 135 0 31 chr2 166592350 166592513 -86664070 + FRAM SINE Alu 1 155 -21 576 199 147 13 chr2 166592615 166592771 -86663812 - MER3 DNA MER1_type 0 209 33 510 265 38 0 chr2 166593977 166594109 -86662474 + L2 LINE L2 3136 3272 0 243 228 33 0 chr2 166594246 166594338 -86662245 + (TA)n Simple_repeat Simple_repeat 1 95 0 183 42 0 0 chr2 166594800 166594824 -86661759 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 443 282 73 16 chr2 166595899 166596023 -86660560 - L2 LINE L2 -4 3268 3138 22 0 0 0 chr2 166596724 166596746 -86659837 + AT_rich Low_complexity Low_complexity 1 22 0 475 314 7 14 chr2 166599628 166599768 -86656815 + L2 LINE L2 3134 3272 0 4739 142 83 15 chr2 166601352 166602198 -86654385 + MER4D LTR ERV1 1 903 0 335 286 126 0 chr2 166602537 166602656 -86653927 - L2 LINE L2 0 3313 3180 339 299 243 6 chr2 166603329 166603654 -86652929 - L2 LINE L2 -925 2389 1988 188 280 0 20 chr2 166603794 166603844 -86652739 - L2 LINE L2 -16 3256 3208 289 275 12 12 chr2 166603970 166604050 -86652533 + MIR SINE MIR 180 259 -3 230 161 0 36 chr2 166604389 166604445 -86652138 + (TATG)n Simple_repeat Simple_repeat 1 54 0 317 217 72 12 chr2 166604445 166604469 -86652114 - L1MC4 LINE L1 -1340 6702 6681 1957 170 33 0 chr2 166604469 166604805 -86651778 - MER7A DNA MER2_type 0 346 2 317 217 72 12 chr2 166604805 166604863 -86651720 - L1MC4 LINE L1 -1361 6681 6615 279 197 0 16 chr2 166604884 166604945 -86651638 - MER47A DNA MER2_type -1 365 306 204 40 0 0 chr2 166605574 166605599 -86650984 + (CAA)n Simple_repeat Simple_repeat 3 27 0 269 250 0 0 chr2 166606042 166606098 -86650485 + L2 LINE L2 3248 3303 -10 341 246 0 0 chr2 166607436 166607505 -86649078 + L2 LINE L2 3244 3312 -1 24830 34 6 0 chr2 166607603 166611570 -86645013 + L1PA4 LINE L1 2171 6155 0 247 186 51 17 chr2 166611823 166611882 -86644701 - L2 LINE L2 -10 3303 3243 1658 226 79 25 chr2 166612563 166613045 -86643538 - HsTC2 DNA Tc2 -1381 517 10 397 79 16 0 chr2 166613359 166613422 -86643161 - L1MA2 LINE L1 0 6304 6241 289 281 156 0 chr2 166613483 166613611 -86642972 - L2 LINE L2 -2620 694 547 249 309 41 32 chr2 166616849 166616972 -86639611 + Charlie8 DNA MER1_type 142 265 -2152 237 204 19 0 chr2 166620040 166620094 -86636489 + MIR SINE MIR 97 151 -111 2508 59 3 3 chr2 166620131 166620436 -86636147 - AluY SINE Alu -6 305 1 426 341 77 46 chr2 166620443 166620768 -86635815 - L2 LINE L2 -14 3258 2924 180 177 32 97 chr2 166623064 166623126 -86633457 + L2 LINE L2 522 579 -2735 260 179 103 51 chr2 166623590 166623668 -86632915 + MIR SINE MIR 69 150 -112 710 253 56 0 chr2 166623678 166623856 -86632727 + MER5A DNA MER1_type 2 189 0 3123 225 1 43 chr2 166624062 166624743 -86631840 - MER82 DNA MER2_type 0 653 1 306 249 190 24 chr2 166625654 166625859 -86630724 - L1ME LINE L1 -334 5787 5549 1007 231 75 29 chr2 166626096 166626604 -86629979 - L1MC4 LINE L1 -566 7476 6993 1694 95 56 4 chr2 166626604 166626835 -86629748 - AluSx SINE Alu -69 243 1 1007 231 75 29 chr2 166626835 166627049 -86629534 - L1MC4 LINE L1 -1049 6993 6790 1504 187 7 21 chr2 166627049 166627333 -86629250 - AluJo SINE Alu -6 306 27 1007 231 75 29 chr2 166627333 166627417 -86629166 - L1MC4 LINE L1 -1252 6790 6711 1907 136 188 22 chr2 166627417 166627784 -86628799 + MSTA LTR MaLR 1 428 0 1007 231 75 29 chr2 166627784 166627803 -86628780 - L1MC4 LINE L1 -1331 6711 6459 243 290 8 38 chr2 166628150 166628281 -86628302 + GA-rich Low_complexity Low_complexity 1 127 0 510 319 28 28 chr2 166629622 166629804 -86626779 - MER91B DNA MER1_type -5 185 4 244 179 54 71 chr2 166630325 166630381 -86626202 + MER91A DNA MER1_type 127 181 -15 890 298 103 19 chr2 166630581 166630787 -86625796 + LTR33 LTR ERVL 16 203 -318 1939 163 120 6 chr2 166630787 166631137 -86625446 + MLT1B LTR MaLR 1 390 0 890 298 103 19 chr2 166631137 166631397 -86625186 + LTR33 LTR ERVL 203 521 0 808 226 122 63 chr2 166631524 166631804 -86624779 + Charlie7 DNA MER1_type 1660 1963 -649 1705 197 3 0 chr2 166631804 166632103 -86624480 + AluJo SINE Alu 1 300 -12 808 226 122 63 chr2 166632103 166632141 -86624442 + Charlie7 DNA MER1_type 1963 1997 -615 2302 69 7 13 chr2 166632144 166632449 -86624134 + L1MA4 LINE L1 5645 5947 -353 483 151 32 0 chr2 166632499 166632592 -86623991 + L1MB3 LINE L1 6085 6180 -3 245 229 0 16 chr2 166632602 166632663 -86623920 + Charlie7 DNA MER1_type 1922 1981 -631 310 156 62 31 chr2 166632719 166632783 -86623800 + LTR33 LTR ERVL 85 150 -371 * 1365 224 119 45 chr2 166632777 166633159 -86623424 + Charlie7 DNA MER1_type 2019 2456 -156 2330 97 3 7 chr2 166633159 166633469 -86623114 - AluSx SINE Alu 0 312 4 1365 224 119 45 chr2 166633469 166633639 -86622944 + Charlie7 DNA MER1_type 2456 2612 0 225 83 0 0 chr2 166634661 166634697 -86621886 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 286 279 203 17 chr2 166635704 166635863 -86620720 + MIR3 SINE MIR 2 189 -65 446 273 125 51 chr2 166635932 166636229 -86620354 + L1ME LINE L1 5485 5770 -351 542 256 48 72 chr2 166637390 166637597 -86618986 - MIR3 SINE MIR -3 205 4 536 347 63 5 chr2 166637679 166637901 -86618682 + MIR SINE MIR 28 262 0 1977 115 18 7 chr2 166641189 166641475 -86615108 + AluJb SINE Alu 2 290 -22 948 199 6 0 chr2 166642227 166642383 -86614200 - FRAM SINE Alu -8 158 2 570 115 0 11 chr2 166644388 166644475 -86612108 - L1MA5 LINE L1 -6 6294 6209 249 139 0 0 chr2 166644837 166644880 -86611703 + (TC)n Simple_repeat Simple_repeat 2 44 0 1767 157 59 0 chr2 166645006 166645293 -86611290 + AluJb SINE Alu 6 309 -3 357 69 14 42 chr2 166645301 166645373 -86611210 + (GAAA)n Simple_repeat Simple_repeat 2 71 0 333 259 0 37 chr2 166645373 166645481 -86611102 - L1ME3 LINE L1 -107 6055 5952 296 262 48 10 chr2 166645494 166645597 -86610986 + L1ME LINE L1 5060 5166 -980 * 3381 193 35 2 chr2 166645591 166646663 -86609920 + L1MC1 LINE L1 4567 5668 -665 38457 86 12 6 chr2 166646663 166652770 -86603813 + L1PA6 LINE L1 11 6147 -7 3975 144 20 29 chr2 166652770 166653033 -86603550 + L1MC1 LINE L1 5653 5917 -416 2274 122 163 0 chr2 166653033 166653401 -86603182 + MSTA LTR MaLR 1 428 0 3975 144 20 29 chr2 166653401 166653821 -86602762 + L1MC1 LINE L1 5917 6333 0 1160 223 160 24 chr2 166653821 166654275 -86602308 + L1ME LINE L1 5156 5689 -479 382 314 59 3 chr2 166654837 166654996 -86601587 - MIR SINE MIR -82 180 19 1328 170 75 78 chr2 166655109 166655515 -86601068 - MLT1C LTR MaLR 0 390 1 198 0 0 0 chr2 166655930 166655952 -86600631 + (A)n Simple_repeat Simple_repeat 1 22 0 502 185 17 101 chr2 166656927 166657000 -86599583 + MER5A DNA MER1_type 4 65 -124 2263 110 0 3 chr2 166657000 166657300 -86599283 + AluSc SINE Alu 1 299 -10 502 185 17 101 chr2 166657300 166657345 -86599238 + MER5A DNA MER1_type 65 112 -77 622 235 0 15 chr2 166657411 166657543 -86599040 - MER5B DNA MER1_type -48 130 1 826 271 122 49 chr2 166657746 166658215 -86598368 + L2 LINE L2 2810 3312 -1 783 215 164 6 chr2 166658221 166658398 -86598185 + MER58A DNA MER1_type 1 205 -19 794 188 33 17 chr2 166658404 166658585 -86597998 - MER53 DNA DNA -5 184 1 1776 124 0 0 chr2 166659532 166659774 -86596809 - AluSx SINE Alu -70 242 1 2152 117 0 46 chr2 166659948 166660274 -86596309 + AluSq SINE Alu 1 311 -2 575 179 137 17 chr2 166660444 166660561 -86596022 - FLAM_A SINE Alu -1 132 2 446 110 0 33 chr2 166660578 166660669 -86595914 - L1PA15 LINE L1 -1 6164 6077 788 220 19 0 chr2 166660669 166660828 -86595755 + Charlie1a DNA MER1_type 5 166 -1289 29307 91 8 7 chr2 166660828 166667260 -86589323 + L1PA7 LINE L1 9 6468 -1 2913 158 45 79 chr2 166667275 166668070 -86588513 + Charlie1 DNA MER1_type 1993 2760 -1 354 280 56 0 chr2 166668148 166668255 -86588328 - MIR SINE MIR -64 198 86 468 340 39 27 chr2 166668660 166668737 -86587846 - MIR SINE MIR 0 262 187 2045 140 0 7 chr2 166668737 166669037 -86587546 - AluSg SINE Alu -12 298 1 468 340 39 27 chr2 166669037 166669052 -86587531 - MIR SINE MIR -75 187 174 8147 26 2 0 chr2 166669052 166670499 -86586084 + L1PA4 LINE L1 4707 6155 0 468 340 39 27 chr2 166670499 166670664 -86585919 - MIR SINE MIR -88 174 1 452 250 55 0 chr2 166670668 166670796 -86585787 + L2 LINE L2 3138 3272 0 251 250 53 0 chr2 166671412 166671488 -86585095 + MLT1L LTR MaLR 20 99 -516 * 338 227 146 45 chr2 166671468 166671578 -86585005 + MLT1J LTR MaLR 52 187 -237 4618 228 53 27 chr2 166671586 166673757 -86582826 + L1ME2 LINE L1 3926 6154 -10 686 262 56 72 chr2 166673768 166674008 -86582575 + MLT1J LTR MaLR 212 448 -63 2082 125 0 0 chr2 166674008 166674323 -86582260 + AluSx SINE Alu 1 315 0 686 262 56 72 chr2 166674323 166674386 -86582197 + MLT1J LTR MaLR 448 511 0 23 33 0 0 chr2 166674519 166674549 -86582034 + AT_rich Low_complexity Low_complexity 1 30 0 297 311 20 92 chr2 166674608 166674804 -86581779 + MIR SINE MIR 54 235 -27 219 36 0 0 chr2 166676813 166676841 -86579742 + (TG)n Simple_repeat Simple_repeat 1 28 0 1182 69 0 0 chr2 166677202 166677346 -86579237 + AluYa5 SINE Alu 149 292 -19 27 62 0 0 chr2 166680525 166680573 -86576010 + AT_rich Low_complexity Low_complexity 1 48 0 25 75 0 0 chr2 166680784 166680837 -86575746 + AT_rich Low_complexity Low_complexity 1 53 0 191 316 140 26 chr2 166680908 166681022 -86575561 + L2 LINE L2 3146 3272 0 1576 78 0 0 chr2 166681276 166681481 -86575102 + L1MA2 LINE L1 6100 6304 0 27 0 0 0 chr2 166681482 166681509 -86575074 + AT_rich Low_complexity Low_complexity 1 27 0 1392 289 118 32 chr2 166681791 166682891 -86573692 - L2 LINE L2 0 3313 2075 2012 237 24 63 chr2 166682935 166683475 -86573108 + LTR40a LTR ERVL 1 519 0 377 329 50 0 chr2 166683735 166683875 -86572708 + MLT1J2 LTR MaLR 16 163 -284 396 339 68 85 chr2 166684031 166684429 -86572154 + L2 LINE L2 2882 3272 0 2907 168 22 6 chr2 166686270 166686777 -86569806 - L1MB3 LINE L1 0 6183 5669 607 199 18 72 chr2 166687010 166687082 -86569501 - MER69 DNA AcHobo -2 2524 2450 2114 122 14 0 chr2 166687082 166687378 -86569205 + AluSx SINE Alu 1 300 -12 607 199 18 72 chr2 166687378 166687471 -86569112 - MER69 DNA AcHobo -76 2450 2368 472 314 26 7 chr2 166687694 166687847 -86568736 - MIR SINE MIR -14 248 93 1054 262 110 35 chr2 166688726 166689536 -86567047 - L2 LINE L2 0 3313 2438 1094 204 56 32 chr2 166690112 166690362 -86566221 - AluJo SINE Alu -12 300 45 336 268 21 21 chr2 166691427 166691524 -86565059 - MER103 DNA DNA -35 131 35 450 165 254 5 chr2 166692863 166692986 -86563597 - L1MC3 LINE L1 -2 7766 6186 797 73 92 0 chr2 166692986 166693095 -86563488 - AluSg/x SINE Alu -21 291 173 313 299 88 57 chr2 166693256 166693450 -86563133 + MIR3 SINE MIR 3 202 -6 205 292 66 44 chr2 166693708 166693845 -86562738 - L2 LINE L2 -455 2859 2720 2000 115 81 37 chr2 166694037 166694360 -86562223 + MER1B DNA MER1_type 1 337 0 1072 77 15 0 chr2 166694399 166694529 -86562054 + L1PA10 LINE L1 6032 6163 -5 1031 276 69 38 chr2 166694569 166694940 -86561643 + MLT1I LTR MaLR 42 394 -15 200 181 121 96 chr2 166695737 166695820 -86560763 - MIR SINE MIR -1 261 177 1067 231 139 12 chr2 166695832 166696447 -86560136 + LTR50 LTR ERVL 6 794 -1 221 345 115 7 chr2 166696449 166696588 -86559995 - MIR SINE MIR -96 166 13 548 248 0 17 chr2 166697740 166697857 -86558726 + MER91B DNA MER1_type 69 183 -7 331 297 191 12 chr2 166698456 166698772 -86557811 - L2 LINE L2 -222 3091 2712 357 314 111 7 chr2 166698818 166698971 -86557612 - MIR SINE MIR -82 180 12 228 148 33 33 chr2 166700485 166700546 -86556037 + (CA)n Simple_repeat Simple_repeat 2 62 0 252 278 103 21 chr2 166700822 166700919 -86555664 - L2 LINE L2 0 3272 3168 520 320 129 16 chr2 166702564 166702929 -86553654 - L2 LINE L2 -4 3309 2904 663 272 117 7 chr2 166702977 166703275 -86553308 - L2 LINE L2 -556 2758 2428 227 382 35 74 chr2 166704682 166704965 -86551618 - L2 LINE L2 -95 3177 2906 1585 113 123 39 chr2 166705554 166705838 -86550745 - AluSg SINE Alu -2 308 1 465 314 44 0 chr2 166705981 166706140 -86550443 + MIR SINE MIR 63 228 -34 255 296 28 0 chr2 166706216 166706287 -86550296 - MIR SINE MIR -80 182 110 1400 159 82 46 chr2 166706528 166706851 -86549732 + MER33 DNA MER1_type 1 323 -1 959 255 42 45 chr2 166707067 166707377 -86549206 - MER102a DNA MER1_type 0 330 22 2141 126 3 0 chr2 166707597 166707890 -86548693 + AluSg SINE Alu 1 294 -16 8681 115 8 30 chr2 166708762 166708912 -86547671 + HSMAR2 DNA Mariner 2 154 -1148 1753 169 21 0 chr2 166708912 166709202 -86547381 + AluJb SINE Alu 2 297 -15 8681 115 8 30 chr2 166709202 166710296 -86546287 + HSMAR2 DNA Mariner 154 1218 -84 1845 143 0 7 chr2 166710296 166710598 -86545985 - AluJb SINE Alu 0 312 13 8681 115 8 30 chr2 166710598 166710680 -86545903 + HSMAR2 DNA Mariner 1218 1300 -2 2103 121 0 0 chr2 166711080 166711391 -86545192 + AluSx SINE Alu 3 313 0 22 0 0 0 chr2 166712348 166712370 -86544213 + AT_rich Low_complexity Low_complexity 1 22 0 400 273 135 34 chr2 166712443 166712710 -86543873 - L2 LINE L2 -1 3312 3019 972 249 82 55 chr2 166712876 166713325 -86543258 + L2 LINE L2 2755 3313 0 237 213 0 0 chr2 166714180 166714227 -86542356 - MER103 DNA DNA -71 95 49 251 289 39 10 chr2 166714540 166714644 -86541939 - MIR SINE MIR -142 120 14 22 0 0 0 chr2 166715796 166715818 -86540765 + AT_rich Low_complexity Low_complexity 1 22 0 230 404 66 0 chr2 166716017 166716153 -86540430 - L2 LINE L2 -5 3267 3123 518 277 14 0 chr2 166716481 166716629 -86539954 + MER91B DNA MER1_type 28 177 -13 322 262 87 10 chr2 166717472 166717575 -86539008 + L2 LINE L2 3162 3272 0 2020 172 12 65 chr2 166717610 166718022 -86538561 - MLT2C1 LTR ERVL -7 390 1 244 314 0 0 chr2 166718192 166718262 -86538321 - L2 LINE L2 -86 3186 3117 21 0 0 0 chr2 166720045 166720066 -86536517 + AT_rich Low_complexity Low_complexity 1 21 0 1313 246 33 26 chr2 166720459 166721050 -86535533 + L2 LINE L2 2677 3268 -45 192 77 0 0 chr2 166722014 166722040 -86534543 + (T)n Simple_repeat Simple_repeat 1 26 0 1028 129 0 25 chr2 166722083 166722246 -86534337 - L1PA13 LINE L1 -11 6152 5994 564 15 0 0 chr2 166722258 166722323 -86534260 + (GAAA)n Simple_repeat Simple_repeat 1 65 0 213 311 0 0 chr2 166722323 166722384 -86534199 - MIR SINE MIR -143 119 59 240 263 0 0 chr2 166723503 166723560 -86533023 - Charlie8 DNA MER1_type 0 2417 2361 351 285 159 60 chr2 166723564 166723929 -86532654 - Charlie8 DNA MER1_type -1875 542 142 536 257 0 7 chr2 166724404 166724540 -86532043 - L1M4 LINE L1 -1822 4324 4190 390 173 0 40 chr2 166724808 166724883 -86531700 + MLT1H LTR MaLR 407 478 -71 360 0 0 0 chr2 166725755 166725795 -86530788 + (TG)n Simple_repeat Simple_repeat 2 41 0 1940 186 68 6 chr2 166726156 166726521 -86530062 + MSTD LTR MaLR 8 395 -1 258 274 179 56 chr2 166826678 166826930 -86429653 + L2 LINE L2 3023 3305 -8 23 0 0 0 chr2 166827884 166827907 -86428676 + AT_rich Low_complexity Low_complexity 1 23 0 195 315 27 14 chr2 166828024 166828097 -86428486 + MIR3 SINE MIR 112 185 -23 2006 125 0 27 chr2 166828478 166828775 -86427808 - AluSq SINE Alu -24 289 1 1449 196 20 55 chr2 166831195 166831529 -86425054 - L1M4 LINE L1 -772 5374 5055 1047 165 34 0 chr2 166831529 166831735 -86424848 - L1MA6 LINE L1 -1 6299 6087 1449 196 20 55 chr2 166831735 166831797 -86424786 - L1M4 LINE L1 -1091 5055 4992 9161 179 31 23 chr2 166831824 166834204 -86422379 - L1PA16 LINE L1 -1 6165 3759 2209 93 33 13 chr2 166834204 166834506 -86422077 - AluY SINE Alu -1 310 3 9161 179 31 23 chr2 166834506 166835216 -86421367 - L1PA16 LINE L1 -2407 3759 3056 2920 226 109 15 chr2 166835215 166835724 -86420859 - L1M4 LINE L1 -1142 5004 4544 * 1907 183 0 0 chr2 166835724 166836030 -86420553 - AluJb SINE Alu -4 308 3 2920 226 109 15 chr2 166836030 166836381 -86420202 - L1M4 LINE L1 -1602 4544 4063 2861 249 36 8 chr2 166836384 166837297 -86419286 - L1M4 LINE L1 -2988 3158 2220 218 231 58 0 chr2 166837706 166837758 -86418825 - MIR3 SINE MIR -42 166 112 5823 25 0 0 chr2 166838179 166839196 -86417387 + L1P1 LINE L1 4690 5706 -449 7710 17 1 0 chr2 166839296 166840735 -86415848 + L1PA2 LINE L1 4727 6166 0 186 189 0 0 chr2 166841456 166841493 -86415090 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 201 207 0 85 chr2 166842549 166842631 -86413952 + A-rich Low_complexity Low_complexity 2 76 0 226 293 129 7 chr2 166842691 166842838 -86413745 - MIR SINE MIR 0 262 98 979 204 23 5 chr2 166843106 166843322 -86413261 + L1ME1 LINE L1 5734 5953 -213 458 219 34 25 chr2 166843323 166843442 -86413141 + L1ME1 LINE L1 6043 6162 -2 335 315 42 7 chr2 166843869 166844012 -86412571 + HsTC2 DNA Tc2 490 637 -1261 1033 260 12 4 chr2 166844424 166844682 -86411901 + HsTC2 DNA Tc2 632 891 -1007 2153 72 8 0 chr2 166844847 166845109 -86411474 - AluSc SINE Alu -43 266 3 468 0 0 0 chr2 166845399 166845451 -86411132 + (TG)n Simple_repeat Simple_repeat 2 53 0 293 308 58 0 chr2 166846248 166846368 -86410215 - L2 LINE L2 -3 3310 3184 792 188 53 0 chr2 166847000 166847170 -86409413 + MIR SINE MIR 28 206 -56 269 160 309 0 chr2 166847549 166847643 -86408940 + MIR SINE MIR 130 252 -10 1612 210 46 9 chr2 166848035 166848382 -86408201 + MLT1A1 LTR MaLR 6 365 0 222 37 0 0 chr2 166848709 166848736 -86407847 + (TG)n Simple_repeat Simple_repeat 2 28 0 14014 106 5 7 chr2 166848750 166849441 -86407142 - L1PA8 LINE L1 -2 6170 5479 2059 133 14 3 chr2 166849441 166849735 -86406848 - AluSg SINE Alu -13 297 1 14014 106 5 7 chr2 166849735 166851927 -86404656 - L1PA8 LINE L1 -693 5479 3305 8173 224 23 21 chr2 166852373 166855190 -86401393 + L1PA16 LINE L1 3127 5938 -228 326 255 78 20 chr2 166855291 166855393 -86401190 + MIR SINE MIR 29 136 -126 246 246 222 40 chr2 166855448 166855574 -86401009 + L2 LINE L2 3146 3294 -19 235 341 78 16 chr2 166855903 166856032 -86400551 - L3 LINE CR1 -802 775 639 762 318 109 23 chr2 166857534 166857766 -86398817 - L2 LINE L2 -4 3309 3098 1504 214 70 62 chr2 166857766 166858265 -86398318 - MLT1D LTR MaLR 0 505 3 762 318 109 23 chr2 166858265 166858610 -86397973 - L2 LINE L2 -215 3098 2686 535 301 32 58 chr2 166858610 166858952 -86397631 + L1ME3A LINE L1 5559 5891 -279 799 277 148 51 chr2 166858999 166859719 -86396864 - L2 LINE L2 -9 3304 2533 260 215 46 0 chr2 166859745 166859810 -86396773 - L1MC4 LINE L1 0 8042 7975 507 151 0 0 chr2 166859836 166859929 -86396654 + (CA)n Simple_repeat Simple_repeat 1 93 0 3969 190 78 32 chr2 166859929 166860896 -86395687 - L1MC4 LINE L1 -229 7813 6803 2570 253 75 19 chr2 166860958 166861781 -86394802 - L2 LINE L2 -826 2488 1620 916 207 67 110 chr2 166861789 166862165 -86394418 - MLT1E2 LTR MaLR -161 344 1 1276 245 117 7 chr2 166862462 166862874 -86393709 + LTR33A LTR ERVL 65 521 -2 1154 175 53 0 chr2 166864528 166864734 -86391849 + MER20 DNA MER1_type 1 217 -2 2190 129 0 0 chr2 166865463 166865766 -86390817 + AluSx SINE Alu 3 305 -7 396 0 0 0 chr2 166866298 166866342 -86390241 + (CA)n Simple_repeat Simple_repeat 1 44 0 291 224 40 13 chr2 166867221 166867297 -86389286 + LTR16C LTR ERVL 412 489 -2 459 322 131 62 chr2 166867683 166868087 -86388496 + L2 LINE L2 2837 3268 -4 578 196 12 68 chr2 166868485 166868648 -86387935 - L1PA16 LINE L1 -5 6161 6008 316 343 79 17 chr2 166869180 166869358 -86387225 + MIR3 SINE MIR 20 208 0 29 47 0 0 chr2 166870139 166870182 -86386401 + AT_rich Low_complexity Low_complexity 1 43 0 186 43 0 0 chr2 166871572 166871595 -86384988 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 1440 260 56 27 chr2 166871680 166872237 -86384346 + L1ME LINE L1 4512 5084 -1062 28 0 0 0 chr2 166872251 166872279 -86384304 + AT_rich Low_complexity Low_complexity 1 28 0 1492 302 104 35 chr2 166872362 166873600 -86382983 + L2 LINE L2 1978 3313 0 226 245 137 0 chr2 166873614 166873716 -86382867 + L1ME LINE L1 5709 5824 -297 874 195 41 26 chr2 166873918 166874113 -86382470 + MER20 DNA MER1_type 17 214 -5 751 269 79 18 chr2 166875494 166875721 -86380862 + MIR SINE MIR 22 262 0 854 247 117 57 chr2 166876055 166876423 -86380160 + LTR16C LTR ERVL 102 491 0 312 172 0 0 chr2 166876524 166876582 -86380001 + (TCTG)n Simple_repeat Simple_repeat 2 59 0 674 220 173 0 chr2 166879814 166880005 -86376578 - MER58A DNA MER1_type 0 224 1 898 281 82 63 chr2 166880467 166880727 -86375856 - L1MEd LINE L1 -4893 1226 972 2396 97 0 13 chr2 166880727 166881036 -86375547 - AluSc SINE Alu -4 305 1 898 281 82 63 chr2 166881036 166881731 -86374852 - L1MEd LINE L1 -5147 972 253 21 0 0 0 chr2 166882001 166882022 -86374561 + AT_rich Low_complexity Low_complexity 1 21 0 42305 35 1 4 chr2 166883230 166889400 -86367183 - L1PA3 LINE L1 -1 6154 2 278 180 16 0 chr2 166890796 166890857 -86365726 + CT-rich Low_complexity Low_complexity 1 62 0 2024 113 32 3 chr2 166890857 166891140 -86365443 - AluSg SINE Alu -18 292 2 399 297 53 24 chr2 166891891 166892239 -86364344 + L2 LINE L2 2699 3120 -193 41049 43 10 4 chr2 166892813 166898932 -86357651 + L1PA4 LINE L1 1 6152 -3 21 0 0 0 chr2 166899014 166899035 -86357548 + AT_rich Low_complexity Low_complexity 1 21 0 348 176 0 0 chr2 166899065 166899133 -86357450 + (TG)n Simple_repeat Simple_repeat 1 68 0 24 32 0 0 chr2 166899495 166899526 -86357057 + AT_rich Low_complexity Low_complexity 1 31 0 266 367 55 3 chr2 166899536 166899866 -86356717 + L1MEc LINE L1 36 382 -6014 234 274 103 26 chr2 166900183 166900417 -86356166 + L1MEc LINE L1 711 962 -5243 * 2136 232 97 15 chr2 166900412 166900730 -86355853 + L1MEc LINE L1 2252 2542 -3673 1470 191 44 39 chr2 166900730 166901092 -86355491 - MLT1A1 LTR MaLR -1 364 1 2136 232 97 15 chr2 166901092 166901647 -86354936 + L1MEc LINE L1 2542 3197 -3018 257 100 40 0 chr2 166901648 166901698 -86354885 + Alu SINE Alu 251 302 0 427 232 9 9 chr2 166902019 166902131 -86354452 + L1MEc LINE L1 3509 3620 -2595 857 218 142 12 chr2 166902201 166902545 -86354038 + Charlie1b DNA MER1_type 106 494 -29 280 267 12 0 chr2 166902589 166902675 -86353908 + L1MEc LINE L1 3658 3744 -2471 2772 262 38 23 chr2 166902697 166903484 -86353099 + L1PA15 LINE L1 1 799 -5988 14305 207 28 14 chr2 166903488 166908947 -86347636 + L1PA15 LINE L1 1236 6811 -5 1580 323 72 36 chr2 166909172 166910333 -86346250 + HERV16 LTR ERVL 1 1203 -3793 847 188 52 31 chr2 166910647 166910839 -86345744 - MER3 DNA MER1_type 0 209 14 2870 324 55 26 chr2 166910902 166911082 -86345501 + HERV16 LTR ERVL 1738 1911 -3574 1443 172 62 52 chr2 166911082 166911373 -86345210 + AluJo SINE Alu 1 294 -18 2870 324 55 26 chr2 166911373 166913364 -86343219 + HERV16 LTR ERVL 1911 4001 -1484 482 250 44 7 chr2 166913352 166913488 -86343095 + HERV16 LTR ERVL 4167 4307 -1347 * 2548 206 100 39 chr2 166913690 166914408 -86342175 + L1ME2 LINE L1 4978 5779 -385 1882 182 19 14 chr2 166914408 166914771 -86341812 + MLT1A1 LTR MaLR 1 365 0 2548 206 100 39 chr2 166914771 166915182 -86341401 + L1ME2 LINE L1 5779 6164 0 23 54 0 0 chr2 166916292 166916329 -86340254 + AT_rich Low_complexity Low_complexity 1 37 0 4369 251 57 47 chr2 166916794 166918321 -86338262 + L1M4b LINE L1 -558 983 -5301 * 5088 165 39 22 chr2 166918291 166919230 -86337353 + L1MA7 LINE L1 5411 6371 -156 1173 201 54 62 chr2 166919230 166919598 -86336985 - MLT1A1 LTR MaLR 0 365 1 5088 165 39 22 chr2 166919598 166919756 -86336827 + L1MA7 LINE L1 6371 6525 -2 278 232 0 0 chr2 166919750 166919819 -86336764 + L1M4b LINE L1 969 1037 -5247 * 1483 292 84 9 chr2 166919823 166920599 -86335984 + L1M4b LINE L1 1136 2112 -4451 31 26 0 0 chr2 166920671 166920709 -86335874 + AT_rich Low_complexity Low_complexity 1 38 0 243 246 89 84 chr2 166920749 166920861 -86335722 + L1M4b LINE L1 2045 2160 -4403 198 91 0 0 chr2 166920861 166920894 -86335689 + (TA)n Simple_repeat Simple_repeat 2 34 0 243 246 89 84 chr2 166920894 166920972 -86335611 + L1M4b LINE L1 2160 2236 -4327 8257 138 36 23 chr2 166921007 166921844 -86334739 + Tigger1 DNA MER2_type 6 831 -1587 2091 114 3 56 chr2 166921844 166922168 -86334415 + AluSq SINE Alu 1 307 -6 8257 138 36 23 chr2 166922168 166922351 -86334232 + Tigger1 DNA MER2_type 831 1010 -1408 2510 73 18 0 chr2 166922351 166922693 -86333890 + L1PA6 LINE L1 5806 6153 -1 1598 120 56 3 chr2 166922703 166922987 -86333596 + L1MA3 LINE L1 6007 6305 0 8257 138 36 23 chr2 166922987 166923186 -86333397 + Tigger1 DNA MER2_type 1018 1213 -1205 1636 189 25 3 chr2 166923186 166923472 -86333111 - AluJb SINE Alu -20 292 1 8257 138 36 23 chr2 166923472 166923700 -86332883 + Tigger1 DNA MER2_type 1213 1484 -934 44468 37 1 1 chr2 166923706 166929873 -86326710 + L1PA3 LINE L1 9 6171 0 5986 105 30 26 chr2 166929873 166930704 -86325879 + Tigger1 DNA MER2_type 1466 2302 -116 2243 116 3 0 chr2 166930704 166931007 -86325576 - AluSp SINE Alu -9 304 1 5986 105 30 26 chr2 166931007 166931125 -86325458 + Tigger1 DNA MER2_type 2302 2418 0 2648 242 31 7 chr2 166931198 166932050 -86324533 + L1M4b LINE L1 2339 3168 -3214 816 140 0 0 chr2 166932056 166932170 -86324413 + AluJb SINE Alu 1 114 -198 1992 144 53 6 chr2 166932170 166932509 -86324074 - THE1A LTR MaLR 0 355 1 9140 117 13 2 chr2 166932509 166934062 -86322521 - THE1-int LTR MaLR 0 1580 1 624 212 7 48 chr2 166934062 166934208 -86322375 + AluJb SINE Alu 110 249 -63 295 133 0 0 chr2 166934233 166934278 -86322305 - THE1-int LTR MaLR -928 652 608 * 728 118 0 34 chr2 166934267 166934386 -86322197 + THE1-int LTR MaLR 953 1067 -513 22 0 0 0 chr2 166934390 166934412 -86322171 + AT_rich Low_complexity Low_complexity 1 22 0 7844 125 37 1 chr2 166934413 166936456 -86320127 - L1PA10 LINE L1 -11 6157 4067 429 229 248 0 chr2 166937604 166937757 -86318826 - MIR SINE MIR -63 199 9 745 279 73 0 chr2 166938082 166938286 -86318297 + MLT1H1 LTR MaLR 197 415 -140 574 179 28 0 chr2 166938273 166938379 -86318204 + MER45A DNA AcHobo 69 177 -1 * 180 0 0 0 chr2 166938402 166938422 -86318161 + (TA)n Simple_repeat Simple_repeat 2 21 0 269 300 100 43 chr2 166939443 166939583 -86317000 - L2 LINE L2 -2 3270 3123 402 57 0 0 chr2 166940831 166940884 -86315699 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 2525 142 42 2 chr2 166941936 166942346 -86314237 + MSTB LTR MaLR 1 426 0 234 320 49 49 chr2 166943176 166943298 -86313285 - MIR3 SINE MIR 0 208 87 1262 236 93 16 chr2 166944522 166945033 -86311550 - L1ME2 LINE L1 -129 6035 5441 * 5057 198 21 18 chr2 166945029 166947043 -86309540 - L1MC1 LINE L1 -178 6155 4140 1219 229 153 10 chr2 166947043 166947428 -86309155 - MSTB2 LTR MaLR 0 457 18 3171 247 11 14 chr2 166947432 166948303 -86308280 - L1MC1 LINE L1 -2000 4146 3278 2694 123 18 0 chr2 166948303 166948743 -86307840 - L1MA5 LINE L1 -2 7319 6872 1445 157 19 0 chr2 166948756 166949072 -86307511 - L1MA5 LINE L1 -743 6424 6141 * 9124 201 29 20 chr2 166949068 166953667 -86302916 - L1MA5 LINE L1 -1949 5218 644 3759 200 29 65 chr2 166953748 166954672 -86301911 - L1M2a LINE L1 -6272 896 6 2107 209 35 14 chr2 166954674 166955295 -86301288 - L1MCa LINE L1 -2840 3586 2953 364 205 16 131 chr2 166955282 166955404 -86301179 - L1MCa LINE L1 -5746 680 573 * 2441 196 52 63 chr2 166955407 166956023 -86300560 - L1MCa LINE L1 -5811 615 7 * 2606 277 85 27 chr2 166956010 166957610 -86298973 - L1ME LINE L1 -4003 2258 519 516 75 0 0 chr2 166957946 166958013 -86298570 - MLT2C2 LTR ERVL -397 67 1 25 0 0 0 chr2 166958417 166958442 -86298141 + AT_rich Low_complexity Low_complexity 1 25 0 735 164 33 0 chr2 166958455 166958577 -86298006 + FLAM_C SINE Alu 1 126 -7 2098 113 7 7 chr2 166958581 166958865 -86297718 + AluSx SINE Alu 1 284 -28 405 0 0 0 chr2 166958873 166958918 -86297665 + (CAT)n Simple_repeat Simple_repeat 2 46 0 804 105 0 0 chr2 166959120 166959234 -86297349 + AluSg/x SINE Alu 189 302 -7 26 0 0 0 chr2 166960452 166960478 -86296105 + AT_rich Low_complexity Low_complexity 1 26 0 842 291 73 18 chr2 166961590 166961865 -86294718 + MLT1J LTR MaLR 5 294 -217 252 304 133 63 chr2 166962803 166963073 -86293510 + L2 LINE L2 2807 3095 -177 387 0 0 0 chr2 166964339 166964382 -86292201 + (CA)n Simple_repeat Simple_repeat 2 44 0 241 254 0 16 chr2 166966298 166966361 -86290222 + GA-rich Low_complexity Low_complexity 2 63 0 245 216 32 17 chr2 166966957 166967045 -86289538 + L1MB3 LINE L1 5342 5434 -746 * 3088 245 38 17 chr2 166967044 166967970 -86288613 + L1M4 LINE L1 3328 4272 -1874 907 163 0 0 chr2 166967972 166968132 -86288451 + L1MB3 LINE L1 5984 6143 -40 15773 164 32 15 chr2 166968140 166970740 -86285843 + L1PB1 LINE L1 1 2556 -4311 2271 109 3 0 chr2 166970740 166971044 -86285539 + AluY SINE Alu 1 305 -6 15773 164 32 15 chr2 166971044 166974803 -86281780 + L1PB1 LINE L1 2556 6490 -377 364 37 37 0 chr2 166974803 166974857 -86281726 + (TA)n Simple_repeat Simple_repeat 2 57 0 15773 164 32 15 chr2 166974857 166975238 -86281345 + L1PB1 LINE L1 6490 6863 -4 263 0 96 19 chr2 166975251 166975303 -86281280 + L1MB4 LINE L1 6125 6180 0 204 302 302 0 chr2 166975851 166975947 -86280636 - L2 LINE L2 -7 3265 3141 407 243 146 27 chr2 166976505 166976806 -86279777 + L1MC4 LINE L1 7691 8027 -15 232 299 15 0 chr2 166976856 166976923 -86279660 + MIR3 SINE MIR 109 176 -32 228 149 0 0 chr2 166976988 166977035 -86279548 + (T)n Simple_repeat Simple_repeat 1 47 0 40470 35 22 1 chr2 166977035 166983063 -86273520 - L1PA2 LINE L1 0 6155 2 2383 164 42 11 chr2 166983338 166983814 -86272769 - L1MC3 LINE L1 -21 7764 7274 1118 305 24 12 chr2 166983830 166984253 -86272330 - L1MCb LINE L1 -5617 428 1 210 37 0 0 chr2 166984559 166984586 -86271997 + (TC)n Simple_repeat Simple_repeat 2 28 0 191 246 18 35 chr2 166984708 166984765 -86271818 + MIR SINE MIR 157 212 -50 212 123 27 68 chr2 166984858 166984931 -86271652 + T-rich Low_complexity Low_complexity 1 70 0 180 339 32 0 chr2 166985044 166985106 -86271477 - L3b LINE CR1 -160 1423 1360 183 80 0 0 chr2 166986715 166986740 -86269843 + (GGGAA)n Simple_repeat Simple_repeat 5 29 0 523 90 20 80 chr2 166986787 166986887 -86269696 - L1PA16 LINE L1 0 6166 6073 4349 12 4 0 chr2 166986889 166987405 -86269178 + L1PA2 LINE L1 5429 5946 -209 250 261 10 0 chr2 166987742 166987806 -86268777 + MIR SINE MIR 98 148 -60 399 256 128 13 chr2 166987814 166987970 -86268613 - MIR SINE MIR 0 262 89 1226 261 37 22 chr2 166988003 166988512 -86268071 + MER113 DNA MER1_type? 1 517 -4 269 315 19 9 chr2 166988789 166988897 -86267686 + LTR67 LTR ERVL 440 548 -9 312 320 123 35 chr2 166989972 166990175 -86266408 - MIR SINE MIR -40 222 2 23 0 0 0 chr2 166990185 166990208 -86266375 + AT_rich Low_complexity Low_complexity 1 23 0 1449 324 107 59 chr2 166990868 166991130 -86265453 - L2 LINE L2 -1311 2003 1755 426 39 0 0 chr2 166991130 166991182 -86265401 + (TG)n Simple_repeat Simple_repeat 2 53 0 1449 324 107 59 chr2 166991182 166991612 -86264971 - L2 LINE L2 -1559 1755 1347 2322 103 0 3 chr2 166991612 166991922 -86264661 + AluSq SINE Alu 1 309 -4 1449 324 107 59 chr2 166991922 166992962 -86263621 - L2 LINE L2 -1967 1347 187 2535 236 13 22 chr2 166993249 166993923 -86262660 + L1ME1 LINE L1 5494 6161 -5 2001 212 114 63 chr2 166993951 166994711 -86261872 + L1ME1 LINE L1 5317 6115 -51 591 201 12 47 chr2 166994605 166994774 -86261809 + L1MA10 LINE L1 6171 6333 -1 * 1209 144 15 0 chr2 166996284 166996479 -86260104 + L1PA16 LINE L1 5956 6153 -13 384 22 0 0 chr2 166996767 166996812 -86259771 + (CA)n Simple_repeat Simple_repeat 1 45 0 339 282 77 22 chr2 166997155 166997336 -86259247 - HAL1 LINE L1 -74 2433 2243 781 264 134 25 chr2 166997519 166997833 -86258750 - HAL1 LINE L1 -616 1891 1544 1549 134 119 34 chr2 166997838 166998107 -86258476 - AluSx SINE Alu -12 300 9 738 279 171 41 chr2 166998167 166998906 -86257677 - L2 LINE L2 -4 3309 2470 1846 158 14 0 chr2 166998964 166999256 -86257327 - AluJb SINE Alu -16 296 1 2664 193 86 32 chr2 166999584 166999807 -86256776 - MER69 DNA AcHobo -1 2525 2316 216 0 0 0 chr2 166999807 166999831 -86256752 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2664 193 86 32 chr2 166999831 167000332 -86256251 - MER69 DNA AcHobo -210 2316 1736 2832 142 62 30 chr2 167000332 167000778 -86255805 + L1MA4 LINE L1 5682 6153 -147 1777 75 0 0 chr2 167000778 167001005 -86255578 + AluY SINE Alu 71 297 -14 2832 142 62 30 chr2 167001005 167001158 -86255425 + L1MA4 LINE L1 6153 6300 0 2664 193 86 32 chr2 167001158 167001327 -86255256 - MER69 DNA AcHobo -790 1736 1578 2650 249 92 16 chr2 167001331 167002196 -86254387 - MER69 DNA AcHobo -1520 1006 1 1778 182 0 3 chr2 167003887 167004173 -86252410 + 7SLRNA srpRNA srpRNA 25 309 -11 291 182 18 0 chr2 167004223 167004278 -86252305 - L2 LINE L2 0 3272 3217 * 379 281 0 50 chr2 167004277 167004398 -86252185 + L2 LINE L2 3197 3311 -2 1715 140 169 63 chr2 167004476 167004933 -86251650 - MLT1D LTR MaLR 0 505 1 243 356 141 0 chr2 167004956 167005105 -86251478 - L2 LINE L2 -189 3083 2914 377 248 55 0 chr2 167005353 167005462 -86251121 - Charlie4 DNA MER1_type -27 1934 1820 2187 76 7 0 chr2 167005611 167005886 -86250697 + AluSp SINE Alu 37 313 0 24 67 0 0 chr2 167006059 167006104 -86250479 + AT_rich Low_complexity Low_complexity 1 45 0 210 333 242 8 chr2 167006104 167006224 -86250359 + L2 LINE L2 3117 3264 -8 10222 177 29 21 chr2 167006227 167007119 -86249464 - L1MC3 LINE L1 -15 7770 6886 396 0 0 0 chr2 167007119 167007163 -86249420 + (TG)n Simple_repeat Simple_repeat 2 45 0 10222 177 29 21 chr2 167007163 167007621 -86248962 - L1MC3 LINE L1 -899 6886 6433 2196 143 25 0 chr2 167007621 167007978 -86248605 - MER47A DNA MER2_type 0 366 1 10222 177 29 21 chr2 167007978 167008544 -86248039 - L1MC3 LINE L1 -1352 6433 5831 2045 149 3 31 chr2 167008544 167008865 -86247718 + AluSx SINE Alu 1 312 0 10222 177 29 21 chr2 167008865 167009145 -86247438 - L1MC3 LINE L1 -1954 5831 5555 2449 154 2 10 chr2 167011333 167011748 -86244835 - MER47B DNA MER2_type 0 418 7 1911 197 45 16 chr2 167012293 167012739 -86243844 + L1MD3 LINE L1 7537 7995 0 455 247 160 40 chr2 167012892 167013167 -86243416 - MLT1K LTR MaLR 0 588 281 330 260 42 10 chr2 167013177 167013273 -86243310 + L1MEc LINE L1 1762 1860 -4536 799 242 47 0 chr2 167013293 167013483 -86243100 - MER58C DNA MER1_type -16 199 1 2987 222 62 21 chr2 167013486 167014650 -86241933 + L1MEc LINE L1 1868 3047 -3168 1950 282 86 28 chr2 167014656 167015705 -86240878 - L2 LINE L2 -12 3301 2208 461 268 87 0 chr2 167015708 167015835 -86240748 - LTR33 LTR ERVL -8 513 376 858 248 180 6 chr2 167016137 167016464 -86240119 - L2 LINE L2 -1089 2225 1842 319 229 0 0 chr2 167016487 167016548 -86240035 + AluJ/FLAM SINE Alu 1 61 -241 1005 172 6 11 chr2 167016568 167016742 -86239841 + FRAM SINE Alu 1 165 -11 234 116 0 70 chr2 167016902 167016945 -86239638 + Alu SINE Alu 252 291 -11 549 248 56 96 chr2 167016945 167017215 -86239368 - L2 LINE L2 -1489 1825 1567 184 376 51 8 chr2 167017230 167017347 -86239236 + MIR SINE MIR 141 262 0 387 0 0 0 chr2 167018390 167018433 -86238150 + (CA)n Simple_repeat Simple_repeat 2 44 0 269 301 43 0 chr2 167018982 167019075 -86237508 + MIR SINE MIR 91 187 -75 216 0 0 0 chr2 167019215 167019239 -86237344 + (T)n Simple_repeat Simple_repeat 1 24 0 841 193 39 0 chr2 167019563 167019744 -86236839 + MER53 DNA DNA 1 188 -1 642 292 70 12 chr2 167020271 167020514 -86236069 + MIR SINE MIR 2 258 -4 370 265 38 45 chr2 167020947 167021084 -86235499 + MER5B DNA MER1_type 1 145 -44 251 328 23 23 chr2 167021114 167021242 -86235341 + MIR SINE MIR 21 148 -114 1840 178 0 6 chr2 167021435 167021749 -86234834 - AluJo SINE Alu 0 312 1 204 136 30 15 chr2 167021802 167021868 -86234715 + (TA)n Simple_repeat Simple_repeat 1 67 0 1511 253 47 20 chr2 167022372 167022966 -86233617 - L1MCc LINE L1 -3905 3217 2608 690 213 49 0 chr2 167023004 167023168 -86233415 + MER58A DNA MER1_type 38 209 -15 1705 188 7 3 chr2 167023304 167023591 -86232992 - AluJo SINE Alu -24 288 1 3312 255 62 60 chr2 167023604 167025884 -86230699 - L1MCc LINE L1 -4611 2511 25 290 75 0 0 chr2 167026198 167026238 -86230345 - MLT2B1 LTR ERVL -8 456 417 712 157 19 22 chr2 167026266 167026418 -86230165 - L1PA15 LINE L1 -261 5904 5748 2158 44 15 0 chr2 167026427 167026700 -86229883 - L1PA7 LINE L1 0 6154 5878 1007 236 103 61 chr2 167026736 167027163 -86229420 - MLT2B1 LTR ERVL -75 445 1 231 275 225 45 chr2 167027311 167027489 -86229094 - LTR40a LTR ERVL -78 441 232 21 0 0 0 chr2 167028755 167028776 -86227807 + AT_rich Low_complexity Low_complexity 1 21 0 1754 146 25 11 chr2 167028838 167029119 -86227464 + AluJb SINE Alu 12 296 -16 1125 136 20 0 chr2 167030773 167030861 -86225722 + MER2 DNA MER2_type 2 87 -258 195 42 0 0 chr2 167030861 167030885 -86225698 + (TG)n Simple_repeat Simple_repeat 2 25 0 1125 136 20 0 chr2 167030885 167030994 -86225589 + MER2 DNA MER2_type 87 203 -142 247 203 68 0 chr2 167031023 167031082 -86225501 + MER2 DNA MER2_type 269 331 -14 275 279 265 34 chr2 167032527 167032674 -86223909 - MER5A DNA MER1_type 0 189 9 315 221 39 0 chr2 167032690 167032767 -86223816 + MER112 DNA MER1_type 1 80 -180 887 224 63 8 chr2 167032880 167033148 -86223435 + L1MD2 LINE L1 6074 6356 -3 2326 107 0 7 chr2 167033595 167033905 -86222678 - AluSx SINE Alu -4 308 1 207 0 0 0 chr2 167037971 167037994 -86218589 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1547 179 31 26 chr2 167040406 167040757 -86215826 - MLT1A1 LTR MaLR -11 354 2 6927 66 9 2 chr2 167040880 167042178 -86214405 - L1PA8 LINE L1 -13 6159 4857 2943 97 11 15 chr2 167042184 167042647 -86213936 + L1P LINE L1 4301 4761 -1385 180 275 25 62 chr2 167048138 167048218 -86208365 + L2 LINE L2 3188 3264 -8 947 174 50 0 chr2 167048267 167048428 -86208155 + FRAM SINE Alu 1 167 -9 244 243 129 0 chr2 167048874 167048944 -86207639 + MIR SINE MIR 73 151 -111 25 51 0 0 chr2 167049335 167049374 -86207209 + AT_rich Low_complexity Low_complexity 1 39 0 312 345 0 0 chr2 167049935 167050019 -86206564 + L2 LINE L2 3188 3271 -1 230 336 78 9 chr2 167050226 167050342 -86206241 + MIR SINE MIR 48 171 -91 863 141 0 0 chr2 167050411 167050532 -86206051 + FLAM_A SINE Alu 1 121 -12 241 192 91 111 chr2 167050715 167050814 -86205769 + MER5A DNA MER1_type 68 164 -25 544 206 10 0 chr2 167050867 167050964 -86205619 - MER5A DNA MER1_type 0 189 92 1484 124 7 4 chr2 167050964 167051229 -86205354 - THE1B LTR MaLR 0 375 1 570 148 0 0 chr2 167051229 167051317 -86205266 - MER5A DNA MER1_type -93 96 9 284 266 76 0 chr2 167051340 167051419 -86205164 + MER5A DNA MER1_type 12 96 -93 287 317 92 8 chr2 167051450 167051570 -86205013 + MER5A DNA MER1_type 40 169 -20 247 293 89 89 chr2 167051454 167051611 -86204972 - MER5A DNA MER1_type -32 157 1 * 736 272 59 35 chr2 167052060 167052471 -86204112 + MLT1G1 LTR MaLR 1 391 -199 549 235 197 0 chr2 167052748 167052880 -86203703 - MER5A DNA MER1_type -15 174 17 782 273 81 64 chr2 167052924 167053456 -86203127 - L1MC4 LINE L1 -150 7892 7352 1755 153 18 4 chr2 167053477 167053758 -86202825 - AluJb SINE Alu 0 312 28 463 284 135 0 chr2 167053794 167054016 -86202567 - MLT1L LTR MaLR -363 252 1 3258 76 20 31 chr2 167056825 167057283 -86199300 + MLT2A2 LTR ERVL 1 453 0 188 414 21 14 chr2 167058098 167058238 -86198345 - L2 LINE L2 -725 2589 2449 1653 187 0 23 chr2 167058239 167058539 -86198044 - AluJb SINE Alu -12 300 8 434 320 0 33 chr2 167058600 167058750 -86197833 - L2 LINE L2 -2 3311 3167 344 269 69 40 chr2 167059069 167059264 -86197319 + MIR3 SINE MIR 2 200 -62 480 264 84 22 chr2 167059321 167059499 -86197084 - LTR33 LTR ERVL 0 521 333 316 335 22 17 chr2 167059560 167059739 -86196844 - LTR33 LTR ERVL -297 224 45 275 246 18 97 chr2 167059758 167059872 -86196711 - MER5A DNA MER1_type 0 189 85 225 292 62 0 chr2 167060367 167060432 -86196151 + L2 LINE L2 3187 3255 -17 639 232 38 11 chr2 167061529 167061714 -86194869 - MLT1L LTR MaLR 0 615 426 1940 183 33 13 chr2 167061742 167062131 -86194452 - MLT2C1 LTR ERVL 0 397 1 437 237 59 30 chr2 167062159 167062294 -86194289 - MLT1L LTR MaLR -333 282 144 200 226 57 0 chr2 167062384 167062437 -86194146 + L2 LINE L2 3258 3313 0 2468 150 7 54 chr2 167064414 167064455 -86192128 - MSTB LTR MaLR 0 426 385 2025 122 17 3 chr2 167064455 167064779 -86191804 + AluSx SINE Alu 1 312 0 2468 150 7 54 chr2 167064779 167065183 -86191400 - MSTB LTR MaLR -41 385 2 2878 3 0 0 chr2 167065423 167065734 -86190849 - AluYa5 SINE Alu 0 311 1 328 216 21 0 chr2 167067472 167067569 -86189014 + GA-rich Low_complexity Low_complexity 1 99 0 242 333 102 27 chr2 167068199 167068387 -86188196 - MIR3 SINE MIR -64 198 3 22 35 0 0 chr2 167068437 167068466 -86188117 + AT_rich Low_complexity Low_complexity 1 29 0 267 233 167 33 chr2 167068900 167068990 -86187593 + MER5A DNA MER1_type 50 151 -38 195 338 14 28 chr2 167070197 167070268 -86186315 + MIR SINE MIR 24 93 -115 191 300 0 0 chr2 167070384 167070437 -86186146 + MIR SINE MIR 99 152 -56 709 204 20 26 chr2 167070672 167070824 -86185759 + MER20 DNA MER1_type 69 219 0 301 254 14 0 chr2 167070961 167071032 -86185551 + ERVL LTR ERVL 2182 2253 -3511 4271 319 79 55 chr2 167071180 167072979 -86183604 + ERVL LTR ERVL 942 2697 -3067 1911 118 57 0 chr2 167072979 167073258 -86183325 + AluSq SINE Alu 1 295 -18 4271 319 79 55 chr2 167073258 167073738 -86182845 + ERVL LTR ERVL 2697 3164 -2600 2418 93 3 6 chr2 167073738 167074050 -86182533 - AluSx SINE Alu 0 312 2 4271 319 79 55 chr2 167074050 167075599 -86180984 + ERVL LTR ERVL 3164 4995 -769 368 78 0 47 chr2 167075639 167075703 -86180880 + L1PA16 LINE L1 6106 6166 0 26 30 0 0 chr2 167075733 167075766 -86180817 + AT_rich Low_complexity Low_complexity 1 33 0 10134 28 1 2 chr2 167075790 167077769 -86178814 + L1PA3 LINE L1 4172 6152 -3 192 158 0 0 chr2 167077773 167077811 -86178772 + A-rich Low_complexity Low_complexity 1 38 0 1742 160 6 31 chr2 167077922 167078241 -86178342 - AluJo SINE Alu -1 311 1 290 255 41 76 chr2 167079720 167079865 -86176718 + L2 LINE L2 3123 3262 -51 300 208 101 77 chr2 167080040 167080208 -86176375 + L2 LINE L2 3073 3244 -69 862 258 105 62 chr2 167080273 167080757 -86175826 + L2 LINE L2 2809 3313 0 405 0 0 0 chr2 167081043 167081088 -86175495 + (CA)n Simple_repeat Simple_repeat 2 46 0 184 322 11 11 chr2 167081505 167081592 -86174991 - MIR3 SINE MIR -1 207 121 394 271 110 0 chr2 167081969 167082087 -86174496 - MIR SINE MIR -5 257 127 220 320 39 13 chr2 167084801 167084879 -86171704 - L3 LINE CR1 0 1577 1498 2370 103 3 0 chr2 167086175 167086485 -86170098 + AluSp SINE Alu 1 311 -2 894 189 0 19 chr2 167087173 167087332 -86169251 + FRAM SINE Alu 2 157 -9 1517 149 38 59 chr2 167087590 167087902 -86168681 + AluJo SINE Alu 1 306 0 579 276 96 7 chr2 167087906 167088207 -86168376 + L1M4 LINE L1 2235 2562 -3584 278 220 103 81 chr2 167088428 167088490 -86168093 + L1M4 LINE L1 2880 2939 -3207 601 158 139 0 chr2 167088490 167088612 -86167971 + FLAM_A SINE Alu 1 136 0 278 220 103 81 chr2 167088612 167088820 -86167763 + L1M4 LINE L1 2939 3158 -2988 181 277 84 12 chr2 167088852 167088935 -86167648 + L2 LINE L2 2529 2617 -697 1328 149 45 23 chr2 167088953 167089262 -86167321 - MER33 DNA MER1_type -3 321 6 381 315 212 20 chr2 167090059 167090262 -86166321 + MIR SINE MIR 16 257 -5 781 309 32 0 chr2 167091105 167091322 -86165261 - MIR SINE MIR -36 226 3 22 35 0 0 chr2 167092846 167092875 -86163708 + AT_rich Low_complexity Low_complexity 1 29 0 1688 173 3 14 chr2 167093193 167093488 -86163095 + AluJb SINE Alu 2 293 -19 1003 212 0 5 chr2 167095232 167095416 -86161167 - MER5A DNA MER1_type 0 189 7 403 311 67 6 chr2 167095458 167095638 -86160945 + MIR SINE MIR 72 262 0 2626 29 9 3 chr2 167095936 167096252 -86160331 + AluYb8 SINE Alu 1 318 0 237 324 52 35 chr2 167097335 167097502 -86159081 + MIR3 SINE MIR 3 172 -36 426 265 245 0 chr2 167097502 167097649 -86158934 - MER5A DNA MER1_type -3 186 4 1355 209 49 9 chr2 167098019 167098077 -86158506 + L1ME1 LINE L1 5143 5197 -1121 2228 98 7 0 chr2 167098077 167098362 -86158221 + AluSq SINE Alu 1 287 -26 1355 209 49 9 chr2 167098362 167098729 -86157854 + L1ME1 LINE L1 5197 5575 -743 663 222 104 14 chr2 167098709 167098921 -86157662 + L1ME1 LINE L1 5918 6148 -18 * 562 259 114 42 chr2 167099361 167099675 -86156908 + L1ME4a LINE L1 5327 5665 -456 329 224 68 48 chr2 167100124 167100271 -86156312 + L1ME4a LINE L1 5970 6119 -2 7279 46 50 0 chr2 167101851 167102999 -86153584 - L1PA7 LINE L1 0 6154 4985 398 305 0 0 chr2 167103205 167103310 -86153273 - MIR SINE MIR -112 150 46 24 67 0 0 chr2 167104066 167104111 -86152472 + AT_rich Low_complexity Low_complexity 1 45 0 205 49 0 49 chr2 167104473 167104514 -86152069 + (CAAAAA)n Simple_repeat Simple_repeat 2 40 0 558 231 0 45 chr2 167104892 167105026 -86151557 + MIR3 SINE MIR 64 191 -17 511 203 15 58 chr2 167105334 167105598 -86150985 + MER34 LTR ERV1 306 542 0 192 77 0 0 chr2 167106000 167106026 -86150557 + (TATG)n Simple_repeat Simple_repeat 2 27 0 288 224 13 0 chr2 167106076 167106152 -86150431 - L1MD1 LINE L1 -11 6231 6155 2308 92 20 0 chr2 167106199 167106505 -86150078 - AluSp SINE Alu -1 312 1 303 214 41 0 chr2 167106633 167106731 -86149852 + L1MB4 LINE L1 6062 6163 -17 1175 272 100 46 chr2 167106772 167107442 -86149141 + L1MB5 LINE L1 54 759 -5783 528 232 0 0 chr2 167107456 167107551 -86149032 + FLAM_A SINE Alu 20 114 -28 477 0 0 0 chr2 167107553 167107606 -86148977 + (CA)n Simple_repeat Simple_repeat 2 54 0 1668 204 20 68 chr2 167107609 167107799 -86148784 + L1MB5 LINE L1 751 949 -5593 2451 113 39 53 chr2 167107799 167108233 -86148350 + MSTA LTR MaLR 1 428 0 1668 204 20 68 chr2 167108233 167108582 -86148001 + L1MB5 LINE L1 949 1264 -5278 * 4125 181 63 8 chr2 167108574 167110085 -86146498 + L1MB5 LINE L1 5059 6659 -13 356 297 128 87 chr2 167110171 167110238 -86146345 + L2 LINE L2 2809 2872 -400 2029 158 30 25 chr2 167110238 167110599 -86145984 + THE1B LTR MaLR 1 363 -1 356 297 128 87 chr2 167110599 167110969 -86145614 + L2 LINE L2 2872 3264 -8 274 297 33 43 chr2 167111250 167111429 -86145154 + MIR SINE MIR 30 204 -58 862 124 0 0 chr2 167112733 167112846 -86143737 + AluY SINE Alu 1 113 -198 4709 50 16 3 chr2 167112846 167113865 -86142718 - MER11A LTR ERVK -1 1265 1 1586 90 0 0 chr2 167113865 167114065 -86142518 + AluY SINE Alu 107 306 -5 1213 117 0 0 chr2 167114065 167114228 -86142355 + AluSg/x SINE Alu 134 296 -16 234 360 121 47 chr2 167114506 167114803 -86141780 + L2 LINE L2 2954 3272 0 460 272 65 71 chr2 167115333 167115587 -86140996 + LTR33 LTR ERVL 14 254 -269 337 325 10 62 chr2 167117878 167118072 -86138511 + MER5A DNA MER1_type 6 189 0 1858 168 3 20 chr2 167118150 167118453 -86138130 + AluSx SINE Alu 1 298 -14 349 293 10 10 chr2 167118904 167119003 -86137580 - MIR SINE MIR 0 262 164 2285 98 24 0 chr2 167119003 167119299 -86137284 - AluSp SINE Alu -10 303 1 304 196 0 0 chr2 167119353 167119404 -86137179 - MIR SINE MIR -93 169 119 197 300 40 0 chr2 167119450 167119500 -86137083 - L2 LINE L2 -11 3302 3251 * 601 255 21 7 chr2 167119473 167119618 -86136965 - MIR SINE MIR -94 168 22 1050 77 0 0 chr2 167119730 167119860 -86136723 - L1PA3 LINE L1 -3 6152 6023 303 154 0 0 chr2 167120457 167120522 -86136061 + GA-rich Low_complexity Low_complexity 2 66 0 213 39 0 0 chr2 167120522 167120548 -86136035 + (TG)n Simple_repeat Simple_repeat 2 27 0 7298 122 37 57 chr2 167121072 167121381 -86135202 + Tigger3b DNA MER2_type 1 315 -2713 1705 159 25 0 chr2 167121381 167121664 -86134919 - AluJo SINE Alu -12 300 11 7298 122 37 57 chr2 167121664 167121979 -86134604 + Tigger3b DNA MER2_type 315 635 -2393 2136 96 0 27 chr2 167121979 167122271 -86134312 + AluY SINE Alu 21 304 -7 7298 122 37 57 chr2 167122271 167122900 -86133683 + Tigger3b DNA MER2_type 635 1229 -2 2133 141 0 3 chr2 167123378 167123690 -86132893 + AluSx SINE Alu 1 311 -1 34 0 0 0 chr2 167123727 167123761 -86132822 + AT_rich Low_complexity Low_complexity 1 34 0 32946 29 3 3 chr2 167123774 167128451 -86128132 - L1PA3 LINE L1 -2 6153 1480 11444 70 15 7 chr2 167128447 167129948 -86126635 + L1P LINE L1 9 1522 -4624 * 350 307 52 7 chr2 167130312 167130465 -86126118 - MIR SINE MIR -83 179 20 247 48 24 24 chr2 167130997 167131039 -86125544 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 312 297 36 29 chr2 167131257 167131395 -86125188 + MLT1H LTR MaLR 95 233 -316 247 122 108 149 chr2 167131526 167131600 -86124983 + MLT1H LTR MaLR 479 549 0 22 56 0 0 chr2 167132316 167132352 -86124231 + AT_rich Low_complexity Low_complexity 1 36 0 421 262 73 29 chr2 167133070 167133127 -86123456 - MIR SINE MIR -6 256 203 2206 114 39 36 chr2 167133127 167133461 -86123122 - MER1B DNA MER1_type 0 337 3 421 262 73 29 chr2 167133461 167133618 -86122965 - MIR SINE MIR -59 203 36 4361 25 0 0 chr2 167133700 167134174 -86122409 - L1PA3 LINE L1 0 6155 5682 243 351 11 0 chr2 167134192 167134286 -86122297 + L3 LINE CR1 1280 1374 -203 4417 194 19 59 chr2 167134640 167134998 -86121585 + Charlie1a DNA MER1_type 14 385 -2376 2744 74 14 6 chr2 167134998 167135350 -86121233 + THE1A LTR MaLR 1 355 0 4417 194 19 59 chr2 167135350 167135420 -86121163 + Charlie1a DNA MER1_type 385 456 -2305 1756 178 11 0 chr2 167135420 167135707 -86120876 + AluJo SINE Alu 5 294 -18 4417 194 19 59 chr2 167135707 167136271 -86120312 + Charlie1a DNA MER1_type 456 967 -488 33783 96 12 57 chr2 167136284 167142728 -86113855 + L1PA7 LINE L1 12 6154 0 855 168 20 0 chr2 167142728 167142877 -86113706 + Charlie1a DNA MER1_type 958 1109 -346 646 214 80 5 chr2 167142988 167143175 -86113408 + L1M4 LINE L1 2666 2866 -3280 800 223 27 32 chr2 167143179 167143367 -86113216 - MSTD LTR MaLR 0 396 210 243 79 0 0 chr2 167143417 167143455 -86113128 + (TTA)n Simple_repeat Simple_repeat 2 39 0 1624 277 13 14 chr2 167143458 167144011 -86112572 + L1M4 LINE L1 3171 3722 -2424 2258 211 55 0 chr2 167144047 167144506 -86112077 + MLT1D LTR MaLR 22 505 0 273 282 18 35 chr2 167145981 167146151 -86110432 + CT-rich Low_complexity Low_complexity 5 171 0 555 296 156 46 chr2 167147568 167147940 -86108643 + MLT2F LTR ERVL 250 662 -1 2525 61 3 13 chr2 167148008 167148318 -86108265 + AluY SINE Alu 1 307 -4 1800 182 14 17 chr2 167148798 167149160 -86107423 - MER74A LTR ERVL -197 361 1 265 183 141 0 chr2 167149604 167149675 -86106908 - L1MB2 LINE L1 0 6171 6091 201 287 117 0 chr2 167151132 167151226 -86105357 - MIR SINE MIR -81 181 77 943 205 5 20 chr2 167151363 167151563 -86105020 - LTR23-int LTR ERV1 -401 4722 4526 1003 289 68 32 chr2 167151567 167151635 -86104948 - Charlie7 DNA MER1_type -2126 486 422 2123 121 7 3 chr2 167151635 167151940 -86104643 - AluSx SINE Alu -6 306 1 1003 289 68 32 chr2 167151940 167152339 -86104244 - Charlie7 DNA MER1_type -2190 422 2 1193 176 22 57 chr2 167152358 167152585 -86103998 - MER20 DNA MER1_type 0 219 1 200 351 14 14 chr2 167152903 167152977 -86103606 + MIR SINE MIR 19 92 -170 1214 81 12 0 chr2 167153001 167153162 -86103421 - AluY SINE Alu -12 299 137 357 75 0 0 chr2 167153574 167153627 -86102956 + (TG)n Simple_repeat Simple_repeat 2 54 0 1265 106 56 0 chr2 167154340 167154520 -86102063 - AluSq SINE Alu -123 190 1 509 246 43 103 chr2 167154640 167154772 -86101811 + L1ME4a LINE L1 5582 5690 -431 791 271 110 64 chr2 167154772 167155270 -86101313 + LTR33A LTR ERVL 3 523 0 509 246 43 103 chr2 167155270 167155418 -86101165 + L1ME4a LINE L1 5690 5845 -276 455 257 128 6 chr2 167155892 167155946 -86100637 - MLT1K LTR MaLR -10 578 532 194 62 31 0 chr2 167155946 167155978 -86100605 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 455 257 128 6 chr2 167155978 167156102 -86100481 - MLT1K LTR MaLR -56 532 378 348 123 18 0 chr2 167156664 167156721 -86099862 - L1MB7 LINE L1 -16 6168 6111 458 289 88 102 chr2 167156898 167157271 -86099312 - MLT1I LTR MaLR 0 409 42 1444 179 153 7 chr2 167157319 167157620 -86098963 + MER7A DNA MER2_type 1 343 -3 246 141 47 62 chr2 167157641 167157705 -86098878 - MLT1J1 LTR MaLR 0 446 384 7877 141 25 18 chr2 167158080 167159450 -86097133 + MER61-int LTR ERV1 2173 5030 -187 313 247 79 36 chr2 167159827 167159955 -86096628 - L1MC/D LINE L1 -491 5630 5498 322 270 31 55 chr2 167161004 167161065 -86095518 + L1MC4a LINE L1 5733 5794 -2014 2373 191 109 27 chr2 167161065 167161589 -86094994 - MLT1F1 LTR MaLR 0 567 1 322 270 31 55 chr2 167161589 167161690 -86094893 + L1MC4a LINE L1 5794 5891 -1917 1704 126 98 25 chr2 167161948 167162300 -86094283 + MSTA LTR MaLR 5 411 -17 289 273 68 11 chr2 167162574 167162750 -86093833 + L1MEd LINE L1 706 891 -5228 378 343 29 0 chr2 167163522 167163662 -86092921 + MER69 DNA AcHobo 6 149 -2377 * 426 211 39 51 chr2 167163650 167163806 -86092777 + MER69 DNA AcHobo 1989 2142 -384 944 199 11 6 chr2 167163814 167163990 -86092593 + AluJo SINE Alu 13 189 -123 556 208 87 111 chr2 167164110 167164240 -86092343 - L1M2 LINE L1 -4225 2202 2070 1597 103 60 4 chr2 167164240 167164472 -86092111 - AluSx SINE Alu -18 294 50 556 208 87 111 chr2 167164472 167164686 -86091897 - L1M2 LINE L1 -4357 2070 1748 207 146 0 0 chr2 167165218 167165259 -86091324 + (TG)n Simple_repeat Simple_repeat 1 41 0 211 320 20 0 chr2 167165772 167165872 -86090711 + C-rich Low_complexity Low_complexity 6 107 0 443 295 120 32 chr2 167166159 167166826 -86089757 - L1MC4a LINE L1 -748 5398 5196 32 26 0 0 chr2 167166853 167166892 -86089691 + AT_rich Low_complexity Low_complexity 1 39 0 1430 200 163 0 chr2 167168065 167168360 -86088223 + MER57A LTR ERV1 15 357 -46 324 301 57 23 chr2 167168460 167168636 -86087947 - MLT1K-int LTR MaLR -882 489 308 1492 150 0 0 chr2 167168640 167168867 -86087716 - AluSg/x SINE Alu 0 312 86 230 136 0 23 chr2 167169784 167169828 -86086755 + L1MB8 LINE L1 6136 6178 0 2243 201 129 111 chr2 167169839 167170260 -86086323 + L1MC3 LINE L1 6675 7087 -908 298 266 0 43 chr2 167170260 167170354 -86086229 + MLT1F1 LTR MaLR 35 124 -443 2243 201 129 111 chr2 167170354 167170829 -86085754 + L1MC3 LINE L1 7087 7894 -101 301 193 70 0 chr2 167173263 167173320 -86083263 - L2 LINE L2 0 3272 3212 247 297 148 29 chr2 167173622 167173831 -86082752 - MLT1K LTR MaLR -20 568 335 255 349 151 9 chr2 167174104 167174316 -86082267 - L2 LINE L2 -218 3054 2813 2393 60 7 3 chr2 167174556 167174856 -86081727 + AluY SINE Alu 1 301 -10 243 301 14 0 chr2 167175778 167175851 -86080732 - L1MEd LINE L1 -5615 504 431 318 262 64 35 chr2 167176086 167176227 -86080356 - L1MEd LINE L1 -5899 220 76 604 139 0 9 chr2 167176436 167176544 -86080039 - L1PA15 LINE L1 0 6165 6059 1541 165 22 13 chr2 167176546 167176861 -86079722 - MER57B LTR ERV1 -3 431 114 1861 19 5 0 chr2 167177245 167177457 -86079126 - AluYa5 SINE Alu -6 305 93 343 284 60 49 chr2 167178575 167178758 -86077825 - MIR3 SINE MIR -7 201 17 1161 126 21 97 chr2 167178788 167179026 -86077557 + AluJo SINE Alu 2 221 -91 238 305 201 0 chr2 167180451 167180605 -86075978 + MIR SINE MIR 22 206 -56 1521 72 0 0 chr2 167180620 167180800 -86075783 + AluSc SINE Alu 1 180 -129 384 200 11 28 chr2 167180956 167181136 -86075447 + (TTG)n Simple_repeat Simple_repeat 3 179 0 522 173 43 7 chr2 167181224 167181363 -86075220 + CT-rich Low_complexity Low_complexity 1 144 0 1197 195 13 26 chr2 167181363 167181594 -86074989 - AluJo SINE Alu -3 309 82 212 227 0 0 chr2 167182013 167182057 -86074526 - L2 LINE L2 -2 3311 3268 5454 179 55 27 chr2 167182417 167183659 -86072924 - L1MC3 LINE L1 -274 7511 6236 21 0 0 0 chr2 167184754 167184775 -86071808 + AT_rich Low_complexity Low_complexity 1 21 0 1818 135 11 0 chr2 167186545 167186819 -86069764 + AluY SINE Alu 1 277 -34 1887 131 22 0 chr2 167187072 167187385 -86069198 + MER61-int LTR ERV1 4886 5205 -12 2946 42 0 0 chr2 167187390 167187744 -86068839 - L1PA4 LINE L1 0 6155 5802 3468 29 0 0 chr2 167187744 167188351 -86068232 + L1P2 LINE L1 5075 5681 -474 274 263 5 134 chr2 167188632 167188841 -86067742 - MER102a DNA MER1_type -3 327 146 503 130 10 0 chr2 167188841 167188941 -86067642 + (TTCC)n Simple_repeat Simple_repeat 2 102 0 210 203 27 14 chr2 167188931 167188979 -86067604 + CT-rich Low_complexity Low_complexity 2 53 -23 * 2239 136 0 0 chr2 167188979 167189289 -86067294 - AluSg SINE Alu 0 310 1 210 203 27 14 chr2 167189289 167189314 -86067269 + CT-rich Low_complexity Low_complexity 53 76 0 558 187 0 0 chr2 167189342 167189449 -86067134 + MLT2B2 LTR ERVL 409 515 0 2214 227 96 50 chr2 167189458 167190154 -86066429 - L1M4 LINE L1 -5543 999 272 1814 118 3 14 chr2 167190297 167190593 -86065990 - L1P LINE L1 -2187 3959 3667 4276 86 52 5 chr2 167190593 167191211 -86065372 + L1PA13 LINE L1 5512 6160 -3 797 254 47 14 chr2 167191215 167191634 -86064949 + L1MCa LINE L1 1750 2220 -4206 504 162 0 0 chr2 167191899 167192004 -86064579 - L1P4 LINE L1 -713 5452 5348 433 307 122 8 chr2 167192039 167192277 -86064306 - HAL1 LINE L1 -671 1836 1572 2362 232 87 41 chr2 167192289 167193202 -86063381 + L1MCc LINE L1 12 1315 -5107 476 275 0 14 chr2 167194321 167194463 -86062120 - MER117 DNA MER1_type -51 146 7 1172 199 146 12 chr2 167194690 167195012 -86061571 + MLT1A1 LTR MaLR 1 365 0 255 169 0 62 chr2 167195105 167195170 -86061413 - Alu SINE Alu 0 301 241 650 277 62 32 chr2 167195574 167195816 -86060767 - MIR SINE MIR -6 256 10 1144 227 123 54 chr2 167196528 167196990 -86059593 - MLT1D LTR MaLR -9 496 3 236 263 12 25 chr2 167197359 167197439 -86059144 + MLT1J2 LTR MaLR 58 136 -314 537 273 52 47 chr2 167198171 167198556 -86058027 - L1ME LINE L1 -477 5644 5258 23 68 0 0 chr2 167199346 167199390 -86057193 + AT_rich Low_complexity Low_complexity 1 44 0 374 318 62 31 chr2 167199548 167199740 -86056843 - L1ME LINE L1 -1999 4147 3950 942 151 6 73 chr2 167200571 167200750 -86055833 + AluJb SINE Alu 134 300 -12 22 0 0 0 chr2 167200804 167200826 -86055757 + AT_rich Low_complexity Low_complexity 1 22 0 2326 105 0 3 chr2 167200893 167201206 -86055377 + AluSx SINE Alu 1 312 0 1564 138 15 4 chr2 167201591 167201852 -86054731 + AluY SINE Alu 1 264 -47 378 341 157 45 chr2 167202194 167203069 -86053514 - L2 LINE L2 -180 3092 2136 406 301 100 50 chr2 167203521 167203780 -86052803 + HAL1b LINE L1 303 574 -774 240 297 129 66 chr2 167204800 167205086 -86051497 + L2 LINE L2 3008 3311 -2 2326 103 0 0 chr2 167205195 167205496 -86051087 + AluSx SINE Alu 1 301 -11 1046 192 74 3 chr2 167205904 167206324 -86050259 + MLT1D LTR MaLR 2 497 -8 307 270 98 76 chr2 167207199 167207396 -86049187 - MIR SINE MIR -21 187 14 325 311 43 6 chr2 167207813 167207974 -86048609 - L1ME LINE L1 -648 5522 5356 392 294 156 20 chr2 167207977 167208368 -86048215 - L1ME LINE L1 -843 5303 4860 189 0 0 0 chr2 167208833 167208854 -86047729 + (A)n Simple_repeat Simple_repeat 1 21 0 491 101 13 13 chr2 167209225 167209304 -86047279 + MADE1 DNA Mariner 2 80 0 380 170 40 90 chr2 167209337 167209437 -86047146 + MLT1E2 LTR MaLR 1 95 -531 1456 133 58 94 chr2 167209559 167209919 -86046664 - THE1C LTR MaLR -27 348 2 1945 137 11 0 chr2 167210692 167210977 -86045606 - AluSp SINE Alu -16 297 10 2220 96 10 0 chr2 167212106 167212399 -86044184 + AluSg SINE Alu 1 296 -14 2060 143 21 19 chr2 167212484 167212856 -86043727 - THE1C LTR MaLR -2 373 1 889 152 8 0 chr2 167213041 167213173 -86043410 - AluJb SINE Alu -21 291 159 1626 142 9 72 chr2 167214317 167214663 -86041920 - MER33 DNA MER1_type 0 324 1 842 156 70 5 chr2 167215088 167215287 -86041296 + Charlie1 DNA MER1_type 2550 2761 0 304 290 48 32 chr2 167215661 167215785 -86040798 + L3 LINE CR1 1443 1568 -9 22 99 0 0 chr2 167216900 167216971 -86039612 + AT_rich Low_complexity Low_complexity 1 71 0 1270 58 26 0 chr2 167217616 167217807 -86038776 + L1P3 LINE L1 5254 5449 -705 278 404 44 0 chr2 167217888 167218002 -86038581 + L2 LINE L2 3153 3271 -1 818 222 45 0 chr2 167218119 167218295 -86038288 - MER63A DNA MER1_type 0 210 27 202 277 0 0 chr2 167218627 167218674 -86037909 - L2 LINE L2 0 3272 3226 726 267 23 1 chr2 167218714 167218907 -86037676 + MLT1H LTR MaLR 36 213 -336 1912 164 3 3 chr2 167219153 167219464 -86037119 + AluJb SINE Alu 1 311 -1 1758 170 27 3 chr2 167219474 167219809 -86036774 - L1MB5 LINE L1 -31 6143 5801 391 280 121 34 chr2 167220365 167220572 -86036011 - L1M2 LINE L1 -5958 891 667 1072 202 29 83 chr2 167220641 167220810 -86035773 - L1MB5 LINE L1 -848 5298 5121 2077 106 6 13 chr2 167220810 167221122 -86035461 + AluY SINE Alu 1 310 -1 1072 202 29 83 chr2 167221122 167221372 -86035211 - L1MB5 LINE L1 -1025 5121 4902 1106 197 52 21 chr2 167221380 167221669 -86034914 - L1MB5 LINE L1 -1976 4170 3873 1042 137 132 0 chr2 167222111 167222308 -86034275 - L1P LINE L1 -5923 223 1 1389 147 0 77 chr2 167222324 167222583 -86034000 - AluJo SINE Alu -30 282 44 2212 107 3 0 chr2 167222772 167223071 -86033512 - AluSc SINE Alu -9 300 1 296 273 45 0 chr2 167223232 167223342 -86033241 - HAL1 LINE L1 -863 1644 1530 234 240 0 60 chr2 167223347 167223447 -86033136 + T-rich Low_complexity Low_complexity 1 94 0 881 168 7 0 chr2 167223693 167223842 -86032741 - Tigger2 DNA MER2_type -23 2695 2546 815 229 6 0 chr2 167223842 167223999 -86032584 - FRAM SINE Alu -22 154 1 296 167 28 14 chr2 167223999 167224071 -86032512 + MLT1I LTR MaLR 326 398 -11 1106 285 92 27 chr2 167224162 167224481 -86032102 - LTR33 LTR ERVL -2 519 156 1376 116 74 5 chr2 167224481 167224696 -86031887 - MER30 DNA MER1_type 0 230 1 1106 285 92 27 chr2 167224696 167224863 -86031720 - LTR33 LTR ERVL -365 156 1 21 82 0 0 chr2 167225061 167225110 -86031473 + AT_rich Low_complexity Low_complexity 1 49 0 1313 126 19 24 chr2 167225632 167225838 -86030745 - AluSg/x SINE Alu -2 310 106 576 190 5 0 chr2 167226363 167226601 -86029982 - ACRO1 Satellite acromeric -5 239 1 359 21 21 0 chr2 167227022 167227070 -86029513 + (TG)n Simple_repeat Simple_repeat 1 49 0 344 227 78 91 chr2 167227165 167227319 -86029264 + MIR SINE MIR 61 212 -50 219 290 65 32 chr2 167228008 167228101 -86028482 + MER5B DNA MER1_type 83 178 0 196 273 0 36 chr2 167228141 167228196 -86028387 - MIR SINE MIR -73 135 83 14095 119 28 27 chr2 167230233 167230425 -86026158 + Tigger1 DNA MER2_type 1 191 -2227 1792 197 0 16 chr2 167230425 167230740 -86025843 - AluJo SINE Alu -2 310 1 14095 119 28 27 chr2 167230740 167231342 -86025241 + Tigger1 DNA MER2_type 191 791 -1627 2047 94 48 92 chr2 167231342 167231734 -86024849 - THE1C LTR MaLR 0 375 1 14095 119 28 27 chr2 167231734 167232421 -86024162 + Tigger1 DNA MER2_type 791 1476 -942 1707 167 3 27 chr2 167232421 167232721 -86023862 + AluJo SINE Alu 1 293 -19 14095 119 28 27 chr2 167232721 167233554 -86023029 + Tigger1 DNA MER2_type 1476 2323 -95 9876 169 19 34 chr2 167233554 167235869 -86020714 + L1PA15 LINE L1 3421 5739 -426 1472 108 212 0 chr2 167235869 167236110 -86020473 - AluSx SINE Alu -20 292 1 9876 169 19 34 chr2 167236110 167236525 -86020058 + L1PA15 LINE L1 5739 6159 -6 14095 119 28 27 chr2 167236525 167236622 -86019961 + Tigger1 DNA MER2_type 2323 2418 0 1938 176 29 3 chr2 167236626 167237006 -86019577 - L1M4 LINE L1 -393 5781 5392 231 254 0 0 chr2 167237011 167237070 -86019513 + MLT1I LTR MaLR 481 539 -16 339 261 96 9 chr2 167237227 167237342 -86019241 - L2 LINE L2 -181 3091 2967 843 316 99 54 chr2 167237385 167238131 -86018452 - L2 LINE L2 -411 2903 2124 210 313 62 0 chr2 167238161 167238241 -86018342 - L2 LINE L2 -1411 1903 1819 1454 130 99 50 chr2 167238262 167238585 -86017998 + MER44D DNA MER2_type 1 609 0 211 278 160 65 chr2 167239024 167239384 -86017199 - L2 LINE L2 -79 3193 2796 374 271 30 36 chr2 167239390 167239556 -86017027 - MLT1K LTR MaLR 0 588 424 403 282 128 13 chr2 167239560 167239716 -86016867 - MLT1K LTR MaLR -330 258 85 402 293 127 13 chr2 167239746 167239903 -86016680 - MLT1K LTR MaLR -330 258 84 321 311 10 29 chr2 167239922 167240025 -86016558 - L2 LINE L2 -521 2793 2693 451 248 43 21 chr2 167240629 167240770 -86015813 - MIR SINE MIR -50 212 69 573 285 18 53 chr2 167240836 167241064 -86015519 + MIR SINE MIR 12 231 -31 21 0 0 0 chr2 167241289 167241310 -86015273 + AT_rich Low_complexity Low_complexity 1 21 0 2009 154 7 0 chr2 167241452 167241758 -86014825 + AluSx SINE Alu 1 308 -4 205 277 24 60 chr2 167242205 167242288 -86014295 + L2 LINE L2 3141 3220 -93 1232 265 66 48 chr2 167242291 167242834 -86013749 - LTR67 LTR ERVL 0 557 5 270 297 91 48 chr2 167243920 167243996 -86012587 - MIR3 SINE MIR -3 205 134 3806 102 13 48 chr2 167243996 167244606 -86011977 - L1PA14 LINE L1 -9 6152 5564 270 297 91 48 chr2 167244606 167244694 -86011889 - MIR3 SINE MIR -74 134 34 248 208 104 0 chr2 167246824 167246901 -86009682 - MIR SINE MIR -61 201 117 212 0 36 0 chr2 167247180 167247208 -86009375 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 536 223 69 0 chr2 167247793 167247923 -86008660 - MER117 DNA MER1_type -29 168 30 207 367 13 0 chr2 167248091 167248170 -86008413 - MER5A DNA MER1_type -5 184 105 734 256 11 0 chr2 167248295 167248475 -86008108 + MIR SINE MIR 76 257 -5 1631 186 7 0 chr2 167249383 167249663 -86006920 - AluJo SINE Alu -30 282 1 183 42 0 0 chr2 167250156 167250180 -86006403 + (CA)n Simple_repeat Simple_repeat 2 25 0 423 263 51 44 chr2 167251136 167251273 -86005310 - MIR SINE MIR -118 144 7 752 276 22 0 chr2 167252462 167252647 -86003936 - MIR SINE MIR -12 250 62 917 238 183 55 chr2 167253822 167253908 -86002675 + L2 LINE L2 2820 2894 -419 949 48 56 0 chr2 167253908 167254034 -86002549 - L1PB1 LINE L1 -2 6149 6017 917 238 183 55 chr2 167254034 167254384 -86002199 + L2 LINE L2 2894 3312 -1 1880 227 43 63 chr2 167254922 167255520 -86001063 + MLT1E2 LTR MaLR 37 622 -4 871 227 0 0 chr2 167255827 167255990 -86000593 + FRAM SINE Alu 1 163 -3 1477 189 63 30 chr2 167256583 167256885 -85999698 + AluJb SINE Alu 1 312 0 322 294 36 67 chr2 167259675 167259869 -85996714 + L2 LINE L2 2872 3059 -213 330 344 32 16 chr2 167259882 167260007 -85996576 + L2 LINE L2 3178 3304 -9 1073 208 148 67 chr2 167260121 167260553 -85996030 - MLT1D LTR MaLR -8 497 31 202 310 93 97 chr2 167261042 167261352 -85995231 - L2 LINE L2 -7 3265 2957 283 363 68 49 chr2 167261541 167261951 -85994632 - L2 LINE L2 -563 2751 2334 2743 148 30 53 chr2 167262288 167262894 -85993689 - Ricksha DNA DNA -23 3228 2637 2021 113 46 0 chr2 167262939 167263221 -85993362 + AluSx SINE Alu 1 295 -17 209 280 178 9 chr2 167263365 167263472 -85993111 - L2 LINE L2 -9 3304 3180 181 329 76 32 chr2 167263672 167263830 -85992753 - L2 LINE L2 -1623 1691 1527 695 281 45 49 chr2 167264100 167264346 -85992237 + MIR SINE MIR 16 260 -2 649 184 146 0 chr2 167264362 167264520 -85992063 + MER3 DNA MER1_type 5 185 -24 2063 105 16 7 chr2 167264540 167264846 -85991737 - L1PA10 LINE L1 -10 6158 5850 594 85 21 0 chr2 167264848 167264942 -85991641 + LTR10E LTR ERV1 1 96 -537 2131 174 12 5 chr2 167264968 167265383 -85991200 + LTR10E LTR ERV1 173 590 -43 3407 79 17 0 chr2 167265389 167265871 -85990712 - L1PA10 LINE L1 -304 5864 5375 2324 107 3 0 chr2 167266668 167266966 -85989617 - AluSp SINE Alu -14 299 1 535 278 112 10 chr2 167267391 167267596 -85988987 + MIR SINE MIR 27 252 -10 1837 172 37 30 chr2 167269859 167270414 -85986169 + MLT2A2 LTR ERVL 1 554 0 186 171 0 24 chr2 167270819 167270860 -85985723 - L2 LINE L2 0 3313 3274 207 0 0 0 chr2 167271158 167271181 -85985402 + (T)n Simple_repeat Simple_repeat 1 23 0 387 192 13 0 chr2 167272700 167272778 -85983805 + MER116 DNA Mariner 2 80 0 28 29 0 0 chr2 167273281 167273316 -85983267 + AT_rich Low_complexity Low_complexity 1 35 0 551 317 38 0 chr2 167273456 167273696 -85982887 + L1MC4a LINE L1 5363 5611 -2197 2149 112 7 3 chr2 167273803 167274099 -85982484 - AluSx SINE Alu -15 297 1 223 193 102 91 chr2 167275112 167275200 -85981383 + MIR3 SINE MIR 72 160 -48 619 227 32 7 chr2 167275200 167275354 -85981229 - MER106B DNA MER1_type 0 1059 902 598 330 45 9 chr2 167275464 167275688 -85980895 + MIR SINE MIR 24 255 -7 232 351 35 35 chr2 167275862 167275976 -85980607 + L2 LINE L2 2992 3105 -167 222 118 0 0 chr2 167276072 167276106 -85980477 + (CA)n Simple_repeat Simple_repeat 1 34 0 554 310 41 4 chr2 167277679 167277947 -85978636 + L1MC4a LINE L1 5612 5889 -1919 2191 122 0 22 chr2 167278002 167278362 -85978221 + AluSx SINE Alu 1 353 0 228 146 0 0 chr2 167278384 167278425 -85978158 + L1ME4a LINE L1 5975 6015 -106 673 235 48 46 chr2 167279548 167279917 -85976666 + MLT1I LTR MaLR 7 409 0 189 171 0 0 chr2 167280138 167280173 -85976410 + CT-rich Low_complexity Low_complexity 2 36 0 213 387 0 38 chr2 167280569 167280675 -85975908 - MIR SINE MIR -113 149 48 208 307 133 0 chr2 167280735 167280810 -85975773 - L2 LINE L2 -179 3093 3009 6767 73 6 0 chr2 167280937 167282233 -85974350 - L1PA8 LINE L1 -14 6158 4857 3495 121 6 0 chr2 167282239 167282783 -85973800 + L1PA8 LINE L1 4301 4847 -1299 1098 158 24 49 chr2 167282802 167283114 -85973469 + MER2 DNA MER2_type 1 345 0 2880 193 57 21 chr2 167283170 167283887 -85972696 - Zaphod DNA AcHobo 0 4031 3289 2086 235 128 17 chr2 167283892 167284488 -85972095 - Zaphod DNA AcHobo -3368 663 2 1217 138 60 0 chr2 167284648 167284865 -85971718 - MER30 DNA MER1_type 0 230 1 576 275 52 20 chr2 167284887 167285099 -85971484 - MIR SINE MIR -38 224 13 463 252 203 0 chr2 167285170 167285313 -85971270 + MIR SINE MIR 41 212 -50 258 309 31 0 chr2 167285375 167285472 -85971111 + MIR SINE MIR 124 223 -39 1985 118 35 0 chr2 167285473 167285761 -85970822 + AluSx SINE Alu 1 298 -14 257 371 138 40 chr2 167285905 167286748 -85969835 - L2 LINE L2 -1668 1646 698 1771 168 52 29 chr2 167286748 167287129 -85969454 - MLT1B LTR MaLR 0 390 1 257 371 138 40 chr2 167287129 167287232 -85969351 - L2 LINE L2 -2616 698 607 491 225 238 19 chr2 167287668 167287828 -85968755 - MIR SINE MIR 0 262 68 1202 226 122 28 chr2 167288855 167289139 -85967444 - MSTD LTR MaLR 0 396 69 1703 155 45 21 chr2 167289139 167289429 -85967154 - AluSx SINE Alu -15 297 1 1202 226 122 28 chr2 167289429 167289506 -85967077 - MSTD LTR MaLR -327 69 1 23 0 0 0 chr2 167289686 167289709 -85966874 + AT_rich Low_complexity Low_complexity 1 23 0 1282 38 6 0 chr2 167289749 167289906 -85966677 - L1PA8 LINE L1 -2 6170 6013 803 75 0 0 chr2 167289906 167290012 -85966571 - L1P3 LINE L1 -591 5581 5476 7055 52 42 0 chr2 167290018 167290959 -85965624 - L1PA7 LINE L1 -1 6153 5204 23 0 0 0 chr2 167291523 167291546 -85965037 + AT_rich Low_complexity Low_complexity 1 23 0 230 275 100 40 chr2 167292380 167292729 -85963854 + L1ME4a LINE L1 4457 4826 -1320 491 295 118 22 chr2 167292745 167293152 -85963431 + L1ME4a LINE L1 5643 6088 -33 147 0 0 0 chr2 167293190 167293337 -85963246 + AT_rich Low_complexity Low_complexity 1 147 0 1021 285 97 14 chr2 167293710 167294131 -85962452 - MLT1L LTR MaLR -18 597 142 381 350 104 27 chr2 167294334 167294554 -85962029 - L2 LINE L2 -47 3225 2989 614 330 17 13 chr2 167294600 167294833 -85961750 - L2 LINE L2 -483 2831 2598 259 290 0 0 chr2 167294901 167294970 -85961613 - L2 LINE L2 -955 2359 2291 354 231 31 51 chr2 167295340 167295535 -85961048 - L1ME4a LINE L1 -250 5871 5681 186 43 0 0 chr2 167295704 167295727 -85960856 + (A)n Simple_repeat Simple_repeat 1 23 0 231 273 71 40 chr2 167295727 167295826 -85960757 + MIR3 SINE MIR 76 177 -31 1006 191 0 0 chr2 167296973 167297151 -85959432 + MER5B DNA MER1_type 1 178 0 211 189 0 0 chr2 167299799 167299836 -85956747 + MIR SINE MIR 117 153 -109 212 0 36 0 chr2 167300044 167300072 -85956511 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 458 221 12 0 chr2 167300576 167300662 -85955921 + L2 LINE L2 3186 3272 0 1960 164 49 0 chr2 167300694 167301042 -85955541 - MLT1A1 LTR MaLR 0 365 1 630 205 0 16 chr2 167301194 167301321 -85955262 + L1ME3 LINE L1 5587 5711 -453 685 281 0 13 chr2 167301350 167301503 -85955080 + MER63A DNA MER1_type 51 201 -9 352 222 111 0 chr2 167301503 167301584 -85954999 + L1ME3 LINE L1 5848 5937 -225 * 756 189 7 13 chr2 167301558 167301738 -85954845 - L1ME2 LINE L1 -285 5881 5695 803 181 6 31 chr2 167302244 167302404 -85954179 + FRAM SINE Alu 1 154 -22 452 249 189 0 chr2 167302673 167302906 -85953677 + L1ME4a LINE L1 5581 5857 -264 598 265 172 9 chr2 167303264 167303479 -85953104 - MLT1J LTR MaLR -261 250 1 335 259 37 0 chr2 167303655 167303763 -85952820 + L1ME4a LINE L1 5969 6080 -41 21 0 0 0 chr2 167304453 167304474 -85952109 + AT_rich Low_complexity Low_complexity 1 21 0 189 181 28 125 chr2 167305167 167305239 -85951344 + L3b LINE CR1 1273 1337 -246 202 182 0 0 chr2 167305421 167305454 -85951129 + polypurine Low_complexity Low_complexity 3 35 0 633 163 163 22 chr2 167305656 167305791 -85950792 + FAM SINE Alu 1 40 -9 1694 170 3 24 chr2 167305794 167306088 -85950495 + AluJb SINE Alu 1 288 -24 8419 83 19 1 chr2 167306470 167308408 -85948175 - L1PA7 LINE L1 -8 6146 4185 189 0 0 0 chr2 167309777 167309798 -85946785 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 22 35 0 0 chr2 167311102 167311131 -85945452 + AT_rich Low_complexity Low_complexity 1 29 0 32 0 0 0 chr2 167312489 167312521 -85944062 + AT_rich Low_complexity Low_complexity 1 32 0 236 299 24 79 chr2 167312521 167312648 -85943935 + MER5A DNA MER1_type 69 188 -1 2313 90 0 0 chr2 167313329 167313618 -85942965 + AluSg SINE Alu 1 289 -21 207 0 0 0 chr2 167314376 167314399 -85942184 + (TAA)n Simple_repeat Simple_repeat 2 24 0 259 197 45 0 chr2 167314931 167314997 -85941586 + (TATAA)n Simple_repeat Simple_repeat 5 73 0 212 330 110 17 chr2 167315182 167315300 -85941283 - L2 LINE L2 -1 3312 3184 347 381 31 35 chr2 167315385 167315645 -85940938 - L2 LINE L2 -511 2803 2545 761 138 0 0 chr2 167315964 167316094 -85940489 + L1M3 LINE L1 5318 5447 -721 726 183 57 51 chr2 167316473 167316648 -85939935 - MER69A DNA AcHobo -1 176 1 1543 142 101 51 chr2 167317115 167317510 -85939073 + Charlie1 DNA MER1_type 2343 2757 -4 522 300 25 92 chr2 167317659 167317986 -85938597 + L2 LINE L2 3008 3312 -1 348 176 0 0 chr2 167318406 167318474 -85938109 + (CA)n Simple_repeat Simple_repeat 1 68 0 2000 118 4 7 chr2 167318533 167318813 -85937770 + AluSg SINE Alu 1 279 -31 260 303 33 92 chr2 167319098 167319250 -85937333 + MIR SINE MIR 70 212 -50 22 0 0 0 chr2 167319398 167319420 -85937163 + AT_rich Low_complexity Low_complexity 1 22 0 2229 107 10 0 chr2 167320862 167321170 -85935413 + AluSp SINE Alu 1 311 -2 394 303 45 45 chr2 167322226 167322358 -85934225 - L2 LINE L2 0 3272 3141 1996 224 38 5 chr2 167324237 167324684 -85931899 - LTR40b LTR ERVL 0 462 1 198 348 35 26 chr2 167324759 167324874 -85931709 + MIR SINE MIR 76 191 -71 407 286 9 18 chr2 167325581 167325693 -85930890 + MER5A DNA MER1_type 74 184 -5 219 276 9 86 chr2 167325608 167325713 -85930870 - MER5A DNA MER1_type -90 99 3 * 399 293 111 11 chr2 167325910 167326091 -85930492 + L1ME4a LINE L1 5724 5922 -199 1844 191 92 27 chr2 167328000 167328495 -85928088 - MER39 LTR ERV1 0 707 1 1564 216 10 10 chr2 167328935 167329241 -85927342 + AluJo SINE Alu 1 306 -6 376 247 280 5 chr2 167329308 167329494 -85927089 + MIR SINE MIR 20 256 -6 513 263 0 53 chr2 167330001 167330153 -85926430 + MER5B DNA MER1_type 18 161 -17 500 245 175 7 chr2 167330534 167330677 -85925906 - MER5A DNA MER1_type -10 179 13 1486 196 22 104 chr2 167332844 167333258 -85923325 + MLT1B LTR MaLR 1 380 -10 695 244 28 15 chr2 167334070 167334280 -85922303 + LTR41 LTR ERVL 1 240 -555 445 190 16 33 chr2 167334641 167334762 -85921821 + LTR41 LTR ERVL 649 767 -6 655 233 16 0 chr2 167335196 167335325 -85921258 + FAM SINE Alu 1 131 -54 387 0 0 0 chr2 167335528 167335571 -85921012 + (CA)n Simple_repeat Simple_repeat 1 43 0 217 323 219 0 chr2 167335677 167335773 -85920810 + MIR SINE MIR 145 261 -1 493 231 38 56 chr2 167335823 167335983 -85920600 - MLT1L LTR MaLR -10 605 449 1921 132 0 41 chr2 167335985 167336280 -85920303 + AluSx SINE Alu 3 285 -27 27 0 0 0 chr2 167336281 167336308 -85920275 + AT_rich Low_complexity Low_complexity 1 27 0 2308 106 0 3 chr2 167336735 167337037 -85919546 - AluSx SINE Alu -11 301 1 272 280 30 21 chr2 167337119 167337276 -85919307 - MIR SINE MIR -25 237 9 183 290 32 0 chr2 167337656 167337718 -85918865 + MIR SINE MIR 79 142 -120 1740 153 27 30 chr2 167338950 167339284 -85917299 - THE1C LTR MaLR 0 375 43 1731 99 121 7 chr2 167339485 167339757 -85916826 + AluSg1 SINE Alu 3 305 -4 737 264 101 0 chr2 167339880 167340107 -85916476 + MIR SINE MIR 13 262 0 481 290 233 69 chr2 167340124 167340794 -85915789 - L3 LINE CR1 -73 1504 725 3825 106 65 2 chr2 167340907 167341492 -85915091 + L1PA13 LINE L1 5485 6106 -57 1834 162 13 22 chr2 167341634 167341948 -85914635 + AluJo SINE Alu 2 312 0 316 331 161 24 chr2 167342265 167342389 -85914194 + L2 LINE L2 3128 3268 -4 1902 89 75 169 chr2 167342390 167342804 -85913779 + Tigger2 DNA MER2_type 1 2659 -59 257 320 154 46 chr2 167344547 167344722 -85911861 + MIR3 SINE MIR 3 196 -12 506 267 86 12 chr2 167344727 167344908 -85911675 + MIR3 SINE MIR 3 195 -13 183 42 0 0 chr2 167345369 167345393 -85911190 + (TTG)n Simple_repeat Simple_repeat 2 25 0 846 136 0 0 chr2 167345892 167346010 -85910573 + FLAM_C SINE Alu 1 118 -15 25 0 0 0 chr2 167346058 167346083 -85910500 + AT_rich Low_complexity Low_complexity 1 25 0 2086 116 28 0 chr2 167346342 167346627 -85909956 + AluSq SINE Alu 1 293 -20 449 257 40 20 chr2 167347810 167347958 -85908625 - L1M4 LINE L1 -1981 4165 4015 473 320 83 51 chr2 167348671 167349140 -85907443 - L1M4 LINE L1 -2409 3737 3254 408 297 80 34 chr2 167349202 167349455 -85907128 - L1M4 LINE L1 -2995 3151 2876 1030 161 9 19 chr2 167349473 167349684 -85906899 - L1MC2 LINE L1 -9 6335 6127 1519 179 18 0 chr2 167349699 167349973 -85906610 - L1MB5 LINE L1 0 6672 6394 27190 133 14 20 chr2 167349974 167356420 -85900163 - L1PA8 LINE L1 -1 6486 5 11368 221 30 12 chr2 167356420 167359237 -85897346 - L1MB5 LINE L1 -270 6402 3369 2061 125 33 13 chr2 167359237 167359541 -85897042 - AluSx SINE Alu -2 310 1 11368 221 30 12 chr2 167359541 167361243 -85895340 - L1MB5 LINE L1 -3303 3369 1699 184 259 0 19 chr2 167361284 167361338 -85895245 + L2 LINE L2 3259 3311 -2 433 242 0 0 chr2 167361418 167361509 -85895074 + L1M4 LINE L1 1125 1215 -5327 * 1010 213 26 10 chr2 167361507 167361993 -85894590 - L1MB5 LINE L1 -4941 1705 1137 1948 138 3 3 chr2 167362072 167362362 -85894221 + AluJb SINE Alu 17 306 -6 265 353 115 0 chr2 167362486 167362608 -85893975 - MIR SINE MIR -122 140 5 2067 133 0 0 chr2 167363398 167363684 -85892899 - AluSx SINE Alu -15 297 12 28 48 0 0 chr2 167363913 167363955 -85892628 + AT_rich Low_complexity Low_complexity 1 42 0 233 300 129 34 chr2 167364005 167364355 -85892228 - HAL1b LINE L1 -618 730 348 211 387 110 19 chr2 167364462 167364617 -85891966 + L2 LINE L2 3104 3272 0 307 303 97 21 chr2 167365927 167366072 -85890511 - MER91A DNA MER1_type 0 196 41 2164 113 0 0 chr2 167366347 167366631 -85889952 - AluSx SINE Alu -25 287 4 27 29 0 0 chr2 167366678 167366712 -85889871 + AT_rich Low_complexity Low_complexity 1 34 0 726 162 8 0 chr2 167366712 167366829 -85889754 - FLAM_C SINE Alu -15 118 1 2809 118 39 16 chr2 167367347 167367914 -85888669 + L1MC/D LINE L1 5135 5711 -622 701 164 16 8 chr2 167367923 167368051 -85888532 + L1MC1 LINE L1 6197 6325 -8 333 351 54 30 chr2 167368569 167368737 -85887846 + MER5A DNA MER1_type 2 173 -16 298 219 0 42 chr2 167368883 167368979 -85887604 + (CGGGG)n Simple_repeat Simple_repeat 3 94 0 468 341 100 23 chr2 167370515 167370946 -85885637 - L1M4 LINE L1 -1008 5138 4675 24 0 0 0 chr2 167371086 167371110 -85885473 + AT_rich Low_complexity Low_complexity 1 24 0 294 278 62 38 chr2 167371158 167371367 -85885216 - L1M4 LINE L1 -1981 4165 3952 492 274 140 33 chr2 167371512 167371906 -85884677 - L1M4 LINE L1 -2191 3955 3520 619 130 0 19 chr2 167373370 167373478 -85883105 - L1MB2 LINE L1 -1 6170 6065 189 0 0 0 chr2 167373690 167373711 -85882872 + (T)n Simple_repeat Simple_repeat 1 21 0 828 160 6 61 chr2 167375293 167375474 -85881109 + FRAM SINE Alu 4 174 -2 1225 202 80 78 chr2 167376144 167376259 -85880324 - LTR56 LTR ERV1 -1 444 331 207 0 0 0 chr2 167376259 167376282 -85880301 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2228 80 0 7 chr2 167376285 167376574 -85880009 - AluY SINE Alu -24 287 1 1225 202 80 78 chr2 167376574 167376890 -85879693 - LTR56 LTR ERV1 -115 330 8 3104 232 145 21 chr2 167376921 167377201 -85879382 + HAL1 LINE L1 1175 1419 -1088 2000 117 0 4 chr2 167377201 167377475 -85879108 + AluSx SINE Alu 1 273 -39 3104 232 145 21 chr2 167377475 167378380 -85878203 + HAL1 LINE L1 1419 2507 0 369 254 45 110 chr2 167378385 167378589 -85877994 + MIR SINE MIR 15 212 -50 215 290 65 32 chr2 167379278 167379371 -85877212 + MER5B DNA MER1_type 83 178 0 194 273 0 36 chr2 167379411 167379466 -85877117 - MIR SINE MIR -128 134 82 249 287 0 69 chr2 167381298 167381399 -85875184 + MER5A DNA MER1_type 6 99 -90 * 438 314 116 34 chr2 167381386 167381739 -85874844 + L2 LINE L2 2438 2819 -495 335 280 96 8 chr2 167381751 167381876 -85874707 + MER91C DNA MER1_type 5 140 0 225 290 19 37 chr2 167381992 167382099 -85874484 + L2 LINE L2 2945 3049 -223 284 265 0 0 chr2 167382661 167382729 -85873854 - MLT1J LTR MaLR -431 80 13 254 327 65 9 chr2 167383785 167383892 -85872691 + L2 LINE L2 3195 3307 -6 230 259 119 76 chr2 167385280 167385465 -85871118 - MIR3 SINE MIR -3 205 13 4344 189 37 10 chr2 167386042 167387327 -85869256 + L1MB7 LINE L1 4843 6165 -19 21 57 0 0 chr2 167388666 167388701 -85867882 + AT_rich Low_complexity Low_complexity 1 35 0 1240 240 121 60 chr2 167389287 167389737 -85866846 - MER68 LTR ERV1 0 562 74 1719 138 126 69 chr2 167389737 167389789 -85866794 - MSTA LTR MaLR 0 428 380 2099 142 3 0 chr2 167389789 167390099 -85866484 + AluSq SINE Alu 1 311 -2 1719 138 126 69 chr2 167390099 167390451 -85866132 - MSTA LTR MaLR -48 380 1 1240 240 121 60 chr2 167390451 167390530 -85866053 - MER68 LTR ERV1 -488 74 1 387 178 27 0 chr2 167390619 167390692 -85865891 - MER21A LTR ERV1 0 931 857 21 0 0 0 chr2 167390768 167390789 -85865794 + AT_rich Low_complexity Low_complexity 1 21 0 4340 176 34 62 chr2 167390826 167391713 -85864870 - MER21A LTR ERV1 -69 862 1 280 349 0 0 chr2 167392395 167392478 -85864105 - L2 LINE L2 -4 3309 3227 219 323 0 0 chr2 167392968 167393030 -85863553 - L2 LINE L2 -10 3303 3242 215 225 22 22 chr2 167393070 167393159 -85863424 + (TA)n Simple_repeat Simple_repeat 2 90 0 190 315 83 55 chr2 167393339 167393628 -85862955 - L2 LINE L2 -863 2451 2155 620 342 76 21 chr2 167393739 167394122 -85862461 - L2 LINE L2 -1181 2133 1730 2543 32 0 3 chr2 167394212 167394521 -85862062 + L1PA2 LINE L1 5843 6150 -5 381 206 103 79 chr2 167394534 167394660 -85861923 + L2 LINE L2 2654 2782 -532 950 125 5 103 chr2 167394667 167394851 -85861732 + FRAM SINE Alu 1 159 -17 463 314 91 15 chr2 167394852 167395068 -85861515 + L2 LINE L2 2774 3002 -311 6756 207 49 33 chr2 167395092 167395796 -85860787 + L1M1 LINE L1 2278 2969 -3316 1687 171 10 19 chr2 167395796 167396106 -85860477 + AluJb SINE Alu 3 309 -3 6756 207 49 33 chr2 167396106 167397399 -85859184 + L1M1 LINE L1 2969 4240 -2045 999 210 148 66 chr2 167397399 167397765 -85858818 + MSTD LTR MaLR 1 396 0 6756 207 49 33 chr2 167397765 167398448 -85858135 + L1M1 LINE L1 4240 5540 -745 4093 189 50 7 chr2 167398452 167399556 -85857027 + L1MB3 LINE L1 4954 6098 -85 552 266 153 52 chr2 167400121 167400350 -85856233 - MIR SINE MIR -4 258 7 2072 114 21 0 chr2 167400448 167400738 -85855845 - AluSx SINE Alu -16 296 1 398 260 199 7 chr2 167400764 167400910 -85855673 + L2 LINE L2 2186 2359 -955 217 261 58 14 chr2 167401416 167401485 -85855098 - MIR SINE MIR -87 175 104 720 209 0 8 chr2 167402089 167402223 -85854360 + AluJo SINE Alu 2 134 -178 1028 258 119 0 chr2 167402285 167402587 -85853996 - MLT1J LTR MaLR -173 338 1 436 264 51 51 chr2 167403817 167404014 -85852569 - L2 LINE L2 -4 3309 3113 216 284 53 21 chr2 167404186 167404281 -85852302 - L2 LINE L2 -481 2833 2736 1984 109 6 51 chr2 167404449 167404762 -85851821 + AluSq SINE Alu 1 299 -14 526 223 64 128 chr2 167405101 167405223 -85851360 + MIR SINE MIR 1 100 -162 1741 106 0 4 chr2 167405223 167405458 -85851125 + AluSq SINE Alu 1 234 -79 526 223 64 128 chr2 167405458 167405586 -85850997 + MIR SINE MIR 100 235 -27 1697 147 15 105 chr2 167406135 167406536 -85850047 - MLT1A1 LTR MaLR 0 365 1 2574 205 47 80 chr2 167406536 167407203 -85849380 - MLT1A1-int LTR MaLR 0 1735 1091 206 247 101 45 chr2 167407302 167407391 -85849192 - MIR SINE MIR -88 174 81 937 113 0 0 chr2 167408412 167408536 -85848047 + FLAM_C SINE Alu 1 124 -19 541 89 0 0 chr2 167409456 167409535 -85847048 - MER41B LTR ERV1 -88 547 469 488 255 138 7 chr2 167409567 167409712 -85846871 - L2 LINE L2 -1 3271 3108 2161 85 0 0 chr2 167410829 167411101 -85845482 - AluY SINE Alu -1 310 39 497 304 20 57 chr2 167412405 167412652 -85843931 + L1ME LINE L1 5502 5739 -382 1472 202 34 14 chr2 167413693 167413985 -85842598 + AluJb SINE Alu 1 298 -14 222 250 0 19 chr2 167414005 167414057 -85842526 + (TATATG)n Simple_repeat Simple_repeat 3 53 0 258 239 239 0 chr2 167414204 167414296 -85842287 + L1ME LINE L1 5653 5766 -396 26 30 0 0 chr2 167414318 167414351 -85842232 + AT_rich Low_complexity Low_complexity 1 33 0 180 0 0 0 chr2 167414439 167414459 -85842124 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 720 120 0 0 chr2 167414463 167414563 -85842020 - AluSg/x SINE Alu -21 288 189 186 310 0 17 chr2 167414735 167414793 -85841790 - L3 LINE CR1 -1443 134 78 22 0 0 0 chr2 167416077 167416099 -85840484 + AT_rich Low_complexity Low_complexity 1 22 0 1166 220 109 12 chr2 167417171 167417609 -85838974 - MLT1F1 LTR MaLR -30 537 1 193 250 100 38 chr2 167418948 167419028 -85837555 - L2 LINE L2 -2 3311 3227 1630 86 0 0 chr2 167419160 167419369 -85837214 + AluSq SINE Alu 96 304 -9 2099 135 0 0 chr2 167420714 167421011 -85835572 - AluSx SINE Alu -15 297 1 2270 142 37 35 chr2 167421480 167421909 -85834674 - MSTB1 LTR MaLR -2 430 1 2193 117 13 0 chr2 167421971 167422271 -85834312 + AluSq SINE Alu 1 304 -9 5268 166 67 32 chr2 167422320 167423349 -85833234 - Charlie1a DNA MER1_type -1630 1131 60 1314 207 90 43 chr2 167423349 167423793 -85832790 - LTR40c LTR ERVL 0 465 1 5268 166 67 32 chr2 167423793 167423856 -85832727 - Charlie1a DNA MER1_type -2701 60 1 625 121 87 107 chr2 167425631 167425780 -85830803 - L1MC/D LINE L1 -534 5708 5563 1003 296 87 31 chr2 167425780 167426236 -85830347 - L1ME LINE L1 -5504 566 76 405 0 0 0 chr2 167426236 167426281 -85830302 + (TG)n Simple_repeat Simple_repeat 2 46 0 1003 296 87 31 chr2 167426281 167426341 -85830242 - L1ME LINE L1 -5994 76 21 371 259 82 7 chr2 167426394 167426541 -85830042 + L1ME LINE L1 612 769 -5301 188 360 70 20 chr2 167427042 167427142 -85829441 + MIR SINE MIR 8 112 -150 583 233 0 8 chr2 167427198 167427318 -85829265 + FLAM_A SINE Alu 1 119 -14 541 180 153 0 chr2 167427464 167427575 -85829008 - FLAM_A SINE Alu -5 128 1 22 35 0 0 chr2 167427974 167428003 -85828580 + AT_rich Low_complexity Low_complexity 1 29 0 2307 107 0 0 chr2 167428971 167429271 -85827312 + AluSq SINE Alu 1 300 -13 534 122 22 0 chr2 167430895 167430985 -85825598 - AluY SINE Alu -2 309 218 22 0 0 0 chr2 167431878 167431900 -85824683 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 167432689 167432717 -85823866 + AT_rich Low_complexity Low_complexity 1 28 0 33 25 0 0 chr2 167433149 167433189 -85823394 + AT_rich Low_complexity Low_complexity 1 40 0 682 124 25 41 chr2 167433867 167433988 -85822595 - FAM SINE Alu -4 45 1 871 256 64 20 chr2 167436046 167436296 -85820287 + MIR SINE MIR 2 262 0 619 332 113 58 chr2 167436667 167436806 -85819777 - L2 LINE L2 -4 3268 3138 3384 123 51 35 chr2 167436806 167436902 -85819681 + MER7C DNA MER2_type 1 94 -2934 2300 78 3 14 chr2 167436902 167437198 -85819385 + AluSp SINE Alu 3 295 -18 3384 123 51 35 chr2 167437198 167437693 -85818890 + MER7C DNA MER2_type 94 601 -1 619 332 113 58 chr2 167437693 167438327 -85818256 - L2 LINE L2 -134 3138 2451 24 32 0 0 chr2 167441036 167441067 -85815516 + AT_rich Low_complexity Low_complexity 1 31 0 1744 157 0 43 chr2 167441752 167442051 -85814532 + AluJo SINE Alu 1 286 -26 30 0 0 0 chr2 167442051 167442081 -85814502 + AT_rich Low_complexity Low_complexity 1 30 0 23 68 0 0 chr2 167442420 167442464 -85814119 + AT_rich Low_complexity Low_complexity 1 44 0 28 61 0 0 chr2 167442621 167442670 -85813913 + AT_rich Low_complexity Low_complexity 1 49 0 396 0 0 0 chr2 167445683 167445727 -85810856 + (CA)n Simple_repeat Simple_repeat 1 44 0 33 0 0 0 chr2 167447134 167447167 -85809416 + AT_rich Low_complexity Low_complexity 1 33 0 243 261 11 22 chr2 167447452 167447544 -85809039 + CT-rich Low_complexity Low_complexity 1 91 0 23 0 0 0 chr2 167447545 167447568 -85809015 + GC_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr2 167447661 167447691 -85808892 + GC_rich Low_complexity Low_complexity 1 30 0 2218 92 0 0 chr2 167451261 167451542 -85805041 + AluSx SINE Alu 1 281 -31 210 37 0 0 chr2 167451543 167451570 -85805013 + (CAAT)n Simple_repeat Simple_repeat 2 28 0 492 126 39 58 chr2 167452957 167453060 -85803523 + MER53 DNA DNA 1 101 -88 27 0 0 0 chr2 167453812 167453839 -85802744 + GC_rich Low_complexity Low_complexity 1 27 0 27 29 0 0 chr2 167455268 167455302 -85801281 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr2 167457370 167457391 -85799192 + AT_rich Low_complexity Low_complexity 1 21 0 221 319 219 6 chr2 167458572 167458732 -85797851 - MIR SINE MIR -43 219 26 247 61 0 0 chr2 167460672 167460705 -85795878 - L1ME4a LINE L1 -5 6116 6084 1244 87 0 0 chr2 167460706 167460867 -85795716 - AluY SINE Alu -150 161 1 821 270 146 40 chr2 167460944 167461065 -85795518 - L1ME4a LINE L1 -241 5880 5773 2250 111 0 3 chr2 167461065 167461362 -85795221 - AluSx SINE Alu -16 296 1 821 270 146 40 chr2 167461362 167461778 -85794805 - L1ME4a LINE L1 -348 5773 5288 1675 96 0 5 chr2 167461954 167462172 -85794411 + AluSg SINE Alu 1 217 -93 271 152 0 0 chr2 167462172 167462218 -85794365 + AluSg SINE Alu 261 306 -2 1009 154 0 0 chr2 167462270 167462426 -85794157 - AluJb SINE Alu -13 299 144 1650 123 47 11 chr2 167463236 167463512 -85793071 + L1MB3 LINE L1 5891 6176 -7 2310 80 0 0 chr2 167463513 167463801 -85792782 - AluSg SINE Alu -22 288 1 21 36 0 0 chr2 167463935 167463963 -85792620 + AT_rich Low_complexity Low_complexity 1 28 0 236 191 24 0 chr2 167463963 167464005 -85792578 + MER57A LTR ERV1 295 337 -66 528 219 133 57 chr2 167464795 167465201 -85791382 - L1ME4a LINE L1 0 6121 5685 28 29 0 0 chr2 167465267 167465302 -85791281 + AT_rich Low_complexity Low_complexity 1 35 0 337 183 150 83 chr2 167466064 167466185 -85790398 - MLT1I LTR MaLR -16 533 282 210 91 0 0 chr2 167467164 167467197 -85789386 + (TA)n Simple_repeat Simple_repeat 1 33 0 2296 106 0 0 chr2 167467197 167467499 -85789084 - AluSx SINE Alu -10 302 1 324 291 149 38 chr2 167467549 167467865 -85788718 + L3b LINE CR1 1103 1453 -130 261 196 0 0 chr2 167468552 167468608 -85787975 + (TG)n Simple_repeat Simple_repeat 1 56 0 1880 182 0 0 chr2 167468669 167468971 -85787612 - AluJo SINE Alu -8 304 3 26 50 0 0 chr2 167469592 167469632 -85786951 + AT_rich Low_complexity Low_complexity 1 40 0 2370 161 31 5 chr2 167469912 167470327 -85786256 + MSTB LTR MaLR 1 426 0 719 242 71 52 chr2 167470392 167470702 -85785881 + L1MC4a LINE L1 5571 5886 -1922 1541 205 64 12 chr2 167470764 167471106 -85785477 - MLT1A1 LTR MaLR -1 364 5 2276 110 3 0 chr2 167472100 167472400 -85784183 - AluSx SINE Alu -11 301 1 757 186 0 0 chr2 167472874 167473003 -85783580 - FLAM_A SINE Alu -4 129 1 2127 96 48 7 chr2 167475469 167475761 -85780822 - AluSq SINE Alu -9 304 1 320 177 0 16 chr2 167477278 167477340 -85779243 + L1MB3 LINE L1 6038 6098 -85 21 0 0 0 chr2 167478158 167478179 -85778404 + AT_rich Low_complexity Low_complexity 1 21 0 259 273 30 0 chr2 167478335 167478401 -85778182 - L3 LINE CR1 -1 1576 1509 25 31 0 0 chr2 167480068 167480100 -85776483 + AT_rich Low_complexity Low_complexity 1 32 0 430 281 16 39 chr2 167480268 167480421 -85776162 + MER5A DNA MER1_type 29 188 -1 2118 113 0 20 chr2 167480520 167480822 -85775761 + AluSx SINE Alu 1 296 -16 22 56 0 0 chr2 167480983 167481019 -85775564 + AT_rich Low_complexity Low_complexity 1 36 0 1975 167 0 0 chr2 167481554 167481853 -85774730 - AluSx SINE Alu -13 299 1 254 313 17 43 chr2 167483103 167483218 -85773365 + MIR SINE MIR 8 119 -143 2297 65 31 7 chr2 167483502 167483794 -85772789 + AluSx SINE Alu 1 299 -13 222 261 9 45 chr2 167484183 167484294 -85772289 + T-rich Low_complexity Low_complexity 2 108 0 2311 93 7 0 chr2 167484393 167484693 -85771890 - AluSg1 SINE Alu -7 302 1 1968 151 0 0 chr2 167484783 167485075 -85771508 + AluJo SINE Alu 1 292 -20 25 90 0 0 chr2 167485109 167485176 -85771407 + AT_rich Low_complexity Low_complexity 1 67 0 1089 136 32 120 chr2 167485177 167485493 -85771090 - L1MA4 LINE L1 -7 6293 6006 423 170 30 0 chr2 167485792 167485892 -85770691 + CT-rich Low_complexity Low_complexity 2 104 0 1069 152 99 19 chr2 167485892 167486050 -85770533 - AluJo SINE Alu 0 312 131 1785 185 0 0 chr2 167486050 167486348 -85770235 - AluJb SINE Alu -14 298 1 1069 152 99 19 chr2 167486348 167486400 -85770183 - AluJo SINE Alu -181 131 85 1676 169 14 10 chr2 167486555 167486850 -85769733 + AluJo SINE Alu 5 300 -12 1578 161 15 70 chr2 167486857 167487187 -85769396 + AluJo SINE Alu 1 312 0 609 184 39 129 chr2 167487231 167487486 -85769097 - L1MB8 LINE L1 -108 6070 5839 540 0 0 0 chr2 167487541 167487601 -85768982 + (TTCC)n Simple_repeat Simple_repeat 4 63 0 248 254 0 0 chr2 167487899 167487954 -85768629 - Tigger5 DNA MER2_type -2268 55 1 1800 110 65 0 chr2 167488335 167488625 -85767958 + L1PA10 LINE L1 5860 6168 0 1286 227 178 7 chr2 167488811 167489265 -85767318 - MER21B LTR ERV1 -133 730 199 275 250 92 0 chr2 167489511 167489587 -85766996 - MER5A DNA MER1_type -2 187 105 207 0 0 0 chr2 167490008 167490031 -85766552 + (TCTG)n Simple_repeat Simple_repeat 2 24 0 449 17 17 0 chr2 167490073 167490131 -85766452 + (CA)n Simple_repeat Simple_repeat 1 59 0 576 186 5 0 chr2 167490552 167490790 -85765793 + ACRO1 Satellite acromeric 1 239 -56 1320 122 19 24 chr2 167491315 167491520 -85765063 + AluSg/x SINE Alu 104 307 -3 21 82 0 0 chr2 167492042 167492091 -85764492 + AT_rich Low_complexity Low_complexity 1 49 0 1095 288 92 27 chr2 167492289 167492456 -85764127 + LTR33 LTR ERVL 1 156 -365 1376 116 74 5 chr2 167492456 167492671 -85763912 + MER30 DNA MER1_type 1 230 0 1095 288 92 27 chr2 167492671 167492990 -85763593 + LTR33 LTR ERVL 156 519 -2 296 167 28 14 chr2 167493081 167493153 -85763430 - MLT1I LTR MaLR -11 398 326 815 229 6 0 chr2 167493153 167493310 -85763273 + FRAM SINE Alu 1 154 -22 881 168 7 0 chr2 167493310 167493459 -85763124 + Tigger2 DNA MER2_type 2546 2695 -23 21 0 0 0 chr2 167493564 167493585 -85762998 + AT_rich Low_complexity Low_complexity 1 21 0 234 240 0 60 chr2 167493707 167493807 -85762776 + A-rich Low_complexity Low_complexity 1 94 0 296 273 45 0 chr2 167493812 167493922 -85762661 + HAL1 LINE L1 1530 1644 -863 2226 104 3 0 chr2 167494083 167494382 -85762201 + AluSc SINE Alu 1 300 -9 1389 147 0 77 chr2 167494571 167494830 -85761753 + AluJo SINE Alu 44 282 -30 38852 66 12 2 chr2 167494846 167497131 -85759452 + L1PA5 LINE L1 1 2263 -3891 198 0 0 0 chr2 167497131 167497153 -85759430 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 38852 66 12 2 chr2 167497153 167500960 -85755623 + L1PA5 LINE L1 2263 6148 -6 23 0 0 0 chr2 167500962 167500985 -85755598 + AT_rich Low_complexity Low_complexity 1 23 0 277 188 116 0 chr2 167501077 167501146 -85755437 - MIR SINE MIR -49 213 137 2488 181 17 11 chr2 167501224 167501687 -85754896 + Tigger7 DNA MER2_type 57 522 -1965 407 148 114 34 chr2 167501700 167501788 -85754795 + Tigger7 DNA MER2_type 2393 2487 0 2273 110 0 7 chr2 167502068 167502376 -85754207 - AluSg SINE Alu -4 306 1 2194 97 0 0 chr2 167503026 167503324 -85753259 - AluSc SINE Alu 0 298 1 2063 120 0 28 chr2 167503830 167504159 -85752424 - AluSx SINE Alu 0 321 1 2271 93 0 3 chr2 167504819 167505110 -85751473 + AluSq SINE Alu 3 292 -21 2268 100 0 26 chr2 167505115 167505425 -85751158 - AluSx SINE Alu -10 302 1 1086 156 5 5 chr2 167505527 167505713 -85750870 - L1PA15 LINE L1 -2 6163 5978 3225 37 0 2 chr2 167505958 167506362 -85750221 - L1PA15 LINE L1 -356 5798 5396 436 70 0 28 chr2 167506362 167506430 -85750153 + L1PA8 LINE L1 6098 6166 -6 21 0 0 0 chr2 167506430 167506451 -85750132 + AT_rich Low_complexity Low_complexity 1 21 0 642 185 8 31 chr2 167506456 167506586 -85749997 + FLAM_A SINE Alu 7 133 -9 2036 144 7 3 chr2 167506794 167507099 -85749484 - AluJb SINE Alu -6 306 1 180 285 123 64 chr2 167507111 167507346 -85749237 - L3b LINE CR1 -204 1379 1131 1008 171 11 21 chr2 167507376 167507563 -85749020 + AluJb SINE Alu 122 306 -6 1686 146 19 65 chr2 167508043 167508352 -85748231 - AluJb SINE Alu -16 296 2 902 251 97 22 chr2 167508614 167509047 -85747536 + L1MC/D LINE L1 5317 5799 -389 272 300 57 21 chr2 167509047 167509187 -85747396 - L2 LINE L2 -1035 2279 2135 2105 145 0 0 chr2 167509415 167509718 -85746865 + AluSx SINE Alu 1 303 -9 22 0 0 0 chr2 167510027 167510049 -85746534 + AT_rich Low_complexity Low_complexity 1 22 0 1771 160 14 7 chr2 167510853 167511146 -85745437 + AluSx SINE Alu 1 295 -17 255 167 36 36 chr2 167511644 167511659 -85744924 - L1MA10 LINE L1 0 6334 6320 1616 246 73 24 chr2 167511659 167512245 -85744338 - L1ME1 LINE L1 -5 6659 6045 500 212 53 12 chr2 167512240 167512410 -85744173 - L1ME1 LINE L1 -3828 2816 2640 * 1254 221 82 50 chr2 167512417 167512837 -85743746 + MER101 LTR ERV1 10 446 -28 1889 163 0 7 chr2 167512837 167513137 -85743446 - AluJb SINE Alu -14 298 1 1254 221 82 50 chr2 167513137 167513155 -85743428 + MER101 LTR ERV1 446 462 -12 3432 214 35 74 chr2 167513174 167514817 -85741766 - L1ME1 LINE L1 -4149 2676 949 459 173 260 0 chr2 167514817 167514921 -85741662 - FLAM_A SINE Alu -2 131 1 3432 214 35 74 chr2 167514921 167515121 -85741462 - L1ME1 LINE L1 -5876 949 743 258 67 283 0 chr2 167515121 167515181 -85741402 - MADE1 DNA Mariner 0 80 4 862 211 5 41 chr2 167515187 167515381 -85741202 - L1ME1 LINE L1 -5797 745 559 210 342 60 17 chr2 167515443 167515560 -85741023 - L2 LINE L2 -534 2780 2659 1012 168 34 103 chr2 167515564 167515826 -85740757 + AluJb SINE Alu 44 287 -25 189 0 0 0 chr2 167515847 167515868 -85740715 + (TAAAA)n Simple_repeat Simple_repeat 5 25 0 1787 119 41 31 chr2 167518524 167518817 -85737766 + AluSg SINE Alu 1 296 -14 184 296 167 0 chr2 167519183 167519237 -85737346 + MIR3 SINE MIR 128 190 -18 495 299 145 14 chr2 167519261 167519468 -85737115 - MIR SINE MIR 0 262 29 1669 146 58 24 chr2 167519591 167519675 -85736908 - MER2 DNA MER2_type -1 343 263 2083 99 20 26 chr2 167519675 167519977 -85736606 + AluSx SINE Alu 1 300 -12 1669 146 58 24 chr2 167519977 167520220 -85736363 - MER2 DNA MER2_type -81 263 5 2107 97 59 0 chr2 167520276 167520565 -85736018 - AluSx SINE Alu -6 306 1 22 0 0 0 chr2 167520611 167520633 -85735950 + AT_rich Low_complexity Low_complexity 1 22 0 2293 107 0 0 chr2 167520796 167521094 -85735489 - AluSx SINE Alu -14 298 1 660 280 92 23 chr2 167521622 167521840 -85734743 - MIR SINE MIR -1 261 29 2270 149 80 124 chr2 167521851 167522005 -85734578 - Looper DNA T2_type 0 1558 1399 2143 129 0 0 chr2 167522005 167522300 -85734283 - AluSx SINE Alu -17 295 1 2270 149 80 124 chr2 167522300 167522529 -85734054 - Looper DNA T2_type -159 1399 1162 761 123 39 0 chr2 167522529 167522659 -85733924 - L1MB3 LINE L1 -10 6173 6039 2270 149 80 124 chr2 167522659 167523033 -85733550 - Looper DNA T2_type -396 1162 783 2666 171 21 46 chr2 167523033 167523641 -85732942 - L1MB5 LINE L1 -8 6166 5574 2270 149 80 124 chr2 167523641 167523727 -85732856 - Looper DNA T2_type -775 783 695 852 210 59 11 chr2 167523781 167523967 -85732616 + MER20 DNA MER1_type 25 219 0 1748 206 103 25 chr2 167523970 167524484 -85732099 - Looper DNA T2_type -868 690 119 2375 77 7 7 chr2 167524484 167524794 -85731789 - AluSq SINE Alu -3 310 1 1748 206 103 25 chr2 167524794 167524892 -85731691 - Looper DNA T2_type -1439 119 30 24 32 0 0 chr2 167525041 167525072 -85731511 + AT_rich Low_complexity Low_complexity 1 31 0 21 57 0 0 chr2 167525226 167525261 -85731322 + AT_rich Low_complexity Low_complexity 1 35 0 926 211 105 11 chr2 167525988 167526254 -85730329 + L1ME3A LINE L1 5852 6142 -28 21 36 0 0 chr2 167528024 167528052 -85728531 + AT_rich Low_complexity Low_complexity 1 28 0 29 21 0 21 chr2 167529360 167529385 -85727198 + AT_rich Low_complexity Low_complexity 1 26 -20 2188 114 0 0 chr2 167529385 167529674 -85726909 - AluSx SINE Alu -21 291 3 29 21 0 21 chr2 167529674 167529695 -85726888 + AT_rich Low_complexity Low_complexity 26 46 0 189 103 0 0 chr2 167529879 167529908 -85726675 - L3 LINE CR1 -457 1120 1092 1406 254 92 77 chr2 167530152 167530838 -85725745 - MER21B LTR ERV1 -160 703 8 1918 154 0 0 chr2 167531054 167531340 -85725243 - AluSx SINE Alu -26 286 1 1993 143 3 0 chr2 167532032 167532326 -85724257 + AluSx SINE Alu 1 295 -17 180 111 0 0 chr2 167533271 167533298 -85723285 + (T)n Simple_repeat Simple_repeat 1 27 0 608 289 118 18 chr2 167533434 167533662 -85722921 + MLT1I LTR MaLR 28 278 -131 811 288 77 26 chr2 167534150 167534685 -85721898 + L1MB3 LINE L1 4467 5028 -1118 2075 122 24 0 chr2 167534691 167534979 -85721604 - AluSx SINE Alu -15 297 3 3803 154 35 14 chr2 167535004 167535035 -85721548 + L1MB3 LINE L1 5452 5481 -702 180 0 0 0 chr2 167535035 167535055 -85721528 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3803 154 35 14 chr2 167535055 167535345 -85721238 + L1MB3 LINE L1 5481 5763 -420 1089 222 114 22 chr2 167535345 167535660 -85720923 + MER2 DNA MER2_type 1 344 0 3803 154 35 14 chr2 167535660 167536045 -85720538 + L1MB3 LINE L1 5763 6174 -9 269 282 97 0 chr2 167536062 167536165 -85720418 + MIR SINE MIR 120 232 -30 278 243 55 39 chr2 167536420 167536591 -85719992 + L1ME3A LINE L1 5344 5443 -721 342 0 0 0 chr2 167536597 167536635 -85719948 + (TG)n Simple_repeat Simple_repeat 1 38 0 210 281 70 0 chr2 167536657 167536714 -85719869 + L2 LINE L2 3248 3308 -5 315 349 46 5 chr2 167536727 167536922 -85719661 + L1ME3A LINE L1 5549 5751 -419 330 313 69 21 chr2 167536929 167537073 -85719510 + L1ME3A LINE L1 5790 5940 -230 760 219 77 0 chr2 167537139 167537308 -85719275 + MER3 DNA MER1_type 2 183 -26 506 223 124 0 chr2 167537294 167537415 -85719168 + MER3 DNA MER1_type 74 209 0 * 281 204 0 0 chr2 167537373 167537422 -85719161 - MER3 DNA MER1_type -120 89 41 * 398 260 113 40 chr2 167537694 167537844 -85718739 - L2 LINE L2 -467 2847 2687 26 0 0 0 chr2 167539462 167539488 -85717095 + AT_rich Low_complexity Low_complexity 1 26 0 2279 84 13 3 chr2 167539909 167540208 -85716375 - AluSg SINE Alu -8 302 1 216 222 136 25 chr2 167540496 167540577 -85716006 - MIR SINE MIR -61 201 112 22 0 0 0 chr2 167541031 167541053 -85715530 + AT_rich Low_complexity Low_complexity 1 22 0 2259 97 7 0 chr2 167542402 167542701 -85713882 + AluSg SINE Alu 2 302 -8 2007 132 3 14 chr2 167542701 167542989 -85713594 + AluSp SINE Alu 1 285 -28 24 32 0 0 chr2 167542989 167543020 -85713563 + AT_rich Low_complexity Low_complexity 1 31 0 266 226 38 0 chr2 167543128 167543181 -85713402 - MIR SINE MIR -116 146 92 739 110 55 55 chr2 167543385 167543512 -85713071 - FLAM_C SINE Alu -3 130 4 941 223 15 5 chr2 167543937 167544143 -85712440 + MER3 DNA MER1_type 2 209 0 473 306 37 33 chr2 167544158 167544403 -85712180 - L1MC4a LINE L1 -1945 5863 5618 218 380 87 0 chr2 167544444 167544536 -85712047 + MIR SINE MIR 46 145 -63 364 228 228 21 chr2 167544917 167545062 -85711521 + Tigger8 DNA MER2_type 148 322 -344 2158 113 3 0 chr2 167545207 167545525 -85711058 - AluSx SINE Alu 0 319 1 387 240 62 47 chr2 167546016 167546145 -85710438 - MIR SINE MIR -29 233 103 221 303 74 33 chr2 167546412 167546534 -85710049 + MIR3 SINE MIR 12 138 -70 3164 218 50 16 chr2 167547303 167548149 -85708434 - L1ME1 LINE L1 -8 6227 5354 214 305 0 9 chr2 167549564 167549669 -85706914 + CT-rich Low_complexity Low_complexity 1 104 0 395 309 67 56 chr2 167549678 167549963 -85706620 - L1M2 LINE L1 -5885 964 677 1173 202 29 83 chr2 167550039 167550208 -85706375 - L1ME1 LINE L1 -848 5367 5190 2185 96 3 13 chr2 167550208 167550521 -85706062 + AluY SINE Alu 1 310 -1 1173 202 29 83 chr2 167550521 167550771 -85705812 - L1ME1 LINE L1 -1025 5190 4971 1187 212 50 20 chr2 167550779 167551081 -85705502 - L1ME1 LINE L1 -1976 4239 3929 * 1557 228 50 58 chr2 167551060 167551660 -85704923 - L1ME1 LINE L1 -3873 2523 1929 2743 148 43 32 chr2 167551704 167552199 -85704384 - L1MB3 LINE L1 0 6183 5680 1966 150 0 0 chr2 167552199 167552493 -85704090 + AluSx SINE Alu 4 297 -15 2743 148 43 32 chr2 167552493 167552532 -85704051 - L1MB3 LINE L1 -503 5680 5643 1290 137 45 11 chr2 167552536 167552830 -85703753 - MER2 DNA MER2_type -6 339 2 1027 212 27 27 chr2 167552862 167553121 -85703462 - MLT1A1 LTR MaLR 0 365 107 579 195 122 18 chr2 167553211 167553375 -85703208 - L1ME1 LINE L1 -4530 1866 1686 * 1938 202 60 12 chr2 167553373 167553887 -85702696 - L1MB3 LINE L1 -818 5328 4790 2025 114 0 56 chr2 167553887 167554211 -85702372 - AluJb SINE Alu -6 306 1 676 268 157 32 chr2 167554232 167554536 -85702047 - L1ME1 LINE L1 -4797 1418 1057 1748 158 34 7 chr2 167554536 167554833 -85701750 - AluJb SINE Alu -7 305 1 676 268 157 32 chr2 167554833 167554905 -85701678 - L1ME1 LINE L1 -5158 1057 995 3071 243 50 20 chr2 167554987 167555951 -85700632 - L1ME1 LINE L1 -5343 1053 36 565 205 49 8 chr2 167555968 167556090 -85700493 - FLAM_A SINE Alu -2 131 5 490 248 55 28 chr2 167556407 167556552 -85700031 - MIR SINE MIR -3 259 111 250 228 163 0 chr2 167556570 167556693 -85699890 + L1ME LINE L1 5205 5347 -799 477 284 96 46 chr2 167556718 167556888 -85699695 + L1ME LINE L1 5529 5716 -454 968 212 52 0 chr2 167556888 167557100 -85699483 - MER58A DNA MER1_type 0 224 2 477 284 96 46 chr2 167557100 167557168 -85699415 + L1ME LINE L1 5716 5779 -391 21 71 0 0 chr2 167557518 167557560 -85699023 + AT_rich Low_complexity Low_complexity 1 42 0 502 128 0 0 chr2 167557753 167557831 -85698752 - MADE1 DNA Mariner -1 79 2 939 125 74 0 chr2 167558845 167559021 -85697562 + MER53 DNA DNA 1 189 0 716 242 37 22 chr2 167560272 167560613 -85695970 - MLT1I LTR MaLR 0 409 16 772 206 34 17 chr2 167560844 167561019 -85695564 + MER5B DNA MER1_type 1 178 0 25 0 0 0 chr2 167562602 167562627 -85693956 + AT_rich Low_complexity Low_complexity 1 25 0 1122 175 21 5 chr2 167562916 167563110 -85693473 - AluJb SINE Alu -30 282 86 21 89 0 0 chr2 167564043 167564099 -85692484 + AT_rich Low_complexity Low_complexity 1 56 0 249 119 0 0 chr2 167564180 167564222 -85692361 + (TTTC)n Simple_repeat Simple_repeat 2 43 0 21 0 0 0 chr2 167565317 167565338 -85691245 + AT_rich Low_complexity Low_complexity 1 21 0 1447 117 10 0 chr2 167567313 167567510 -85689073 + AluSg SINE Alu 1 199 -111 1557 194 17 17 chr2 167567629 167567922 -85688661 - AluJb SINE Alu -19 293 1 1061 138 19 0 chr2 167568842 167569001 -85687582 - FRAM SINE Alu -4 162 1 2065 111 31 0 chr2 167569017 167569305 -85687278 - AluSx SINE Alu -15 297 1 1358 118 0 0 chr2 167569308 167569486 -85687097 - AluY SINE Alu -133 178 1 329 269 179 74 chr2 167569884 167570371 -85686212 + L1M4 LINE L1 3326 3863 -2283 313 301 87 20 chr2 167570459 167570655 -85685928 - L1MEc LINE L1 -4028 2368 2160 22 0 0 0 chr2 167570706 167570728 -85685855 + AT_rich Low_complexity Low_complexity 1 22 0 839 152 15 0 chr2 167570728 167570860 -85685723 - AluJb SINE Alu -23 289 156 321 282 65 78 chr2 167571054 167571440 -85685143 - HAL1b LINE L1 -625 723 343 1793 151 45 7 chr2 167571660 167571951 -85684632 + MER1B DNA MER1_type 38 339 0 3199 169 90 38 chr2 167572352 167573185 -85683398 - LTR1 LTR ERV1 0 785 1 1822 142 3 10 chr2 167573472 167573775 -85682808 + AluSx SINE Alu 1 301 -11 346 261 0 43 chr2 167573993 167574085 -85682498 - L2 LINE L2 0 3313 3226 1177 158 81 0 chr2 167574319 167574565 -85682018 - L1MA7 LINE L1 0 6291 6026 315 0 0 0 chr2 167575038 167575073 -85681510 + (CA)n Simple_repeat Simple_repeat 2 36 0 22 0 0 0 chr2 167580270 167580292 -85676291 + AT_rich Low_complexity Low_complexity 1 22 0 223 140 0 35 chr2 167580587 167580644 -85675939 + (TTTC)n Simple_repeat Simple_repeat 4 58 0 21 89 0 0 chr2 167581784 167581840 -85674743 + AT_rich Low_complexity Low_complexity 1 56 0 26 50 0 0 chr2 167581860 167581900 -85674683 + AT_rich Low_complexity Low_complexity 1 40 0 377 352 53 44 chr2 167582521 167582748 -85673835 - MIR SINE MIR -14 248 20 21 36 0 0 chr2 167582950 167582978 -85673605 + AT_rich Low_complexity Low_complexity 1 28 0 670 181 0 56 chr2 167584399 167584543 -85672040 + FLAM_C SINE Alu 1 136 -7 267 79 0 0 chr2 167584734 167584772 -85671811 + (TA)n Simple_repeat Simple_repeat 1 38 0 665 296 60 21 chr2 167584796 167585029 -85671554 + MIR SINE MIR 9 250 -12 190 268 158 0 chr2 167585365 167585447 -85671136 + L2 LINE L2 3126 3220 -93 22 35 0 0 chr2 167585482 167585511 -85671072 + AT_rich Low_complexity Low_complexity 1 29 0 204 303 157 11 chr2 167586494 167586583 -85670000 - L2 LINE L2 -2 3270 3169 220 337 40 40 chr2 167587160 167587261 -85669322 - L2 LINE L2 -5 3267 3167 482 338 56 5 chr2 167587323 167587521 -85669062 + MIR SINE MIR 6 213 -49 1176 272 87 12 chr2 167588274 167588675 -85667908 - LTR16B LTR ERVL 0 464 34 501 265 0 37 chr2 167588794 167588930 -85667653 - MIR SINE MIR -130 132 2 204 102 61 0 chr2 167589878 167589927 -85666656 + (TA)n Simple_repeat Simple_repeat 1 52 0 25 0 0 0 chr2 167593974 167593999 -85662584 + AT_rich Low_complexity Low_complexity 1 25 0 425 214 223 26 chr2 167596228 167596457 -85660126 + L1ME4a LINE L1 5836 6109 -12 26 50 0 0 chr2 167596597 167596637 -85659946 + AT_rich Low_complexity Low_complexity 1 40 0 274 311 58 10 chr2 167596976 167597079 -85659504 - MIR SINE MIR -64 144 37 393 248 218 30 chr2 167597884 167598017 -85658566 + MER91A DNA MER1_type 4 161 -35 351 279 66 41 chr2 167598406 167598528 -85658055 + MIR SINE MIR 5 129 -133 931 120 0 0 chr2 167598547 167598680 -85657903 - FLAM_C SINE Alu 0 133 1 181 273 91 13 chr2 167598690 167598767 -85657816 + MIR SINE MIR 126 208 -54 207 0 0 0 chr2 167600231 167600254 -85656329 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1424 208 0 25 chr2 167600265 167600549 -85656034 - AluJo SINE Alu -35 277 1 2112 113 17 3 chr2 167602622 167602922 -85653661 - AluSx SINE Alu -8 304 1 382 272 112 0 chr2 167602998 167603123 -85653460 - MIR3 SINE MIR -1 207 69 684 269 157 55 chr2 167603193 167603557 -85653026 - L2 LINE L2 0 3313 2913 770 217 144 0 chr2 167603950 167604130 -85652453 - MER58A DNA MER1_type -18 206 1 204 178 67 0 chr2 167604272 167604317 -85652266 - L2 LINE L2 -1 3312 3265 343 238 0 38 chr2 167604565 167604645 -85651938 + MER5A DNA MER1_type 20 96 -93 2442 108 15 44 chr2 167604905 167605314 -85651269 + L1MA8 LINE L1 5620 6016 -275 338 389 125 20 chr2 167605332 167605470 -85651113 - L2 LINE L2 -401 2913 2791 2018 118 0 7 chr2 167605470 167605780 -85650803 - AluSx SINE Alu 0 308 1 338 389 125 20 chr2 167605780 167606151 -85650432 - L2 LINE L2 -523 2791 2349 21 57 0 0 chr2 167606264 167606299 -85650284 + AT_rich Low_complexity Low_complexity 1 35 0 254 276 61 33 chr2 167607707 167607888 -85648695 + L1MB5 LINE L1 4384 4569 -1577 209 250 0 0 chr2 167607967 167608007 -85648576 - MIR SINE MIR 0 262 223 24 0 0 98 chr2 167608081 167608105 -85648478 + AT_rich Low_complexity Low_complexity 1 19 -27 792 134 0 15 chr2 167608105 167608239 -85648344 - L1PB1 LINE L1 -1 6150 6019 24 0 0 98 chr2 167608239 167608265 -85648318 + AT_rich Low_complexity Low_complexity 19 46 0 26 82 0 0 chr2 167608340 167608401 -85648182 + AT_rich Low_complexity Low_complexity 1 61 0 825 246 108 52 chr2 167608777 167609065 -85647518 - MLT1J LTR MaLR -39 472 168 1283 196 44 32 chr2 167609065 167609204 -85647379 + Tigger2 DNA MER2_type 1 137 -2581 1802 172 28 0 chr2 167609204 167609495 -85647088 - AluJb SINE Alu -12 300 2 1283 196 44 32 chr2 167609495 167609671 -85646912 + Tigger2 DNA MER2_type 137 320 -2398 498 91 0 0 chr2 167609666 167609732 -85646851 + Tigger2 DNA MER2_type 679 744 -1974 * 1376 164 27 19 chr2 167609797 167610053 -85646530 + Tigger2 DNA MER2_type 2461 2718 0 397 256 28 78 chr2 167610053 167610233 -85646350 - MLT1J LTR MaLR -340 171 1 259 338 51 2 chr2 167610503 167610621 -85645962 + MIR SINE MIR 28 146 -62 189 226 0 0 chr2 167610639 167610670 -85645913 + L2 LINE L2 3263 3293 -20 203 287 113 28 chr2 167610703 167610901 -85645682 + L2 LINE L2 2460 2721 -593 372 243 0 19 chr2 167610901 167611008 -85645575 + L1MB5 LINE L1 5171 5275 -871 1520 172 14 25 chr2 167611012 167611316 -85645267 + AluJb SINE Alu 7 307 0 4198 161 92 7 chr2 167611359 167612200 -85644383 + L1MB5 LINE L1 5263 6174 0 1250 228 7 17 chr2 167612561 167612859 -85643724 - AluJo SINE Alu -17 295 1 304 255 196 0 chr2 167612892 167612994 -85643589 + L2 LINE L2 3191 3312 -1 269 301 43 0 chr2 167618209 167618302 -85638281 + 5S rRNA rRNA 6 102 -19 198 0 0 0 chr2 167621646 167621668 -85634915 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 397 259 27 75 chr2 167622187 167622334 -85634249 + MER5A DNA MER1_type 10 149 -40 304 350 88 43 chr2 167623116 167623513 -85633070 + L1M2 LINE L1 533 947 -5902 192 77 0 0 chr2 167623808 167623834 -85632749 + (CA)n Simple_repeat Simple_repeat 2 27 0 375 23 0 0 chr2 167626738 167626782 -85629801 + (TG)n Simple_repeat Simple_repeat 2 45 0 21 36 0 0 chr2 167627446 167627474 -85629109 + GC_rich Low_complexity Low_complexity 1 28 0 259 145 0 32 chr2 167629030 167629092 -85627491 + (TTC)n Simple_repeat Simple_repeat 2 61 0 261 0 0 0 chr2 167630588 167630617 -85625966 + (CA)n Simple_repeat Simple_repeat 2 30 0 453 157 17 13 chr2 167631041 167631108 -85625475 + MIR SINE MIR 91 156 -106 209 136 23 45 chr2 167631108 167631152 -85625431 + L2 LINE L2 3214 3256 -16 372 279 98 103 chr2 167632095 167632816 -85623767 + L1M2 LINE L1 530 1391 -5458 235 247 0 43 chr2 167632879 167632972 -85623611 + (CCCCG)n Simple_repeat Simple_repeat 3 91 0 207 0 0 0 chr2 167633345 167633368 -85623215 + (TGGA)n Simple_repeat Simple_repeat 1 23 0 190 188 0 31 chr2 167633490 167633554 -85623029 + T-rich Low_complexity Low_complexity 2 63 0 25 0 0 0 chr2 167635847 167635872 -85620711 + GC_rich Low_complexity Low_complexity 1 25 0 370 280 156 47 chr2 167636695 167637016 -85619567 - L1M2 LINE L1 -5487 1362 1007 261 0 0 0 chr2 167640980 167641009 -85615574 + (TTCA)n Simple_repeat Simple_repeat 3 31 0 200 94 31 0 chr2 167641659 167641691 -85614892 + (TG)n Simple_repeat Simple_repeat 2 34 0 187 236 111 28 chr2 167642144 167642216 -85614367 + MIR3 SINE MIR 127 204 -4 561 229 175 27 chr2 167642281 167642504 -85614079 + MER112 DNA MER1_type 1 256 0 240 35 0 0 chr2 167642877 167642906 -85613677 + (CA)n Simple_repeat Simple_repeat 1 29 0 576 239 7 45 chr2 167643079 167643234 -85613349 + MER5B DNA MER1_type 16 164 -14 4797 137 15 7 chr2 167643337 167644786 -85611797 - L1PA15 LINE L1 -117 6048 4586 192 347 123 42 chr2 167647031 167647316 -85609267 - L2 LINE L2 -158 3114 2807 1219 147 215 12 chr2 167648308 167648559 -85608024 + AluJb SINE Alu 1 302 0 1958 102 106 3 chr2 167649905 167650189 -85606394 - AluSq SINE Alu 0 313 1 433 294 61 71 chr2 167651462 167651659 -85604924 - MIR SINE MIR -62 200 6 1895 135 7 7 chr2 167651844 167652125 -85604458 - AluSx SINE Alu -8 304 24 893 218 109 0 chr2 167652355 167652566 -85604017 - MIR SINE MIR 0 262 29 473 65 0 140 chr2 167652706 167652799 -85603784 - MADE1 DNA Mariner 0 80 1 2222 98 19 3 chr2 167652875 167653182 -85603401 - AluSx SINE Alu 0 312 1 22 0 0 0 chr2 167653381 167653403 -85603180 + AT_rich Low_complexity Low_complexity 1 22 0 1123 96 117 10 chr2 167653844 167654041 -85602542 - AluSx SINE Alu -94 218 1 416 259 139 13 chr2 167654610 167654656 -85601927 + MER5B DNA MER1_type 1 40 -138 192 111 0 0 chr2 167654656 167654692 -85601891 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 416 259 139 13 chr2 167654692 167654803 -85601780 + MER5B DNA MER1_type 40 178 0 600 103 82 0 chr2 167655977 167656074 -85600509 - FLAM_A SINE Alu -15 127 23 226 273 171 0 chr2 167656168 167656256 -85600327 + L2 LINE L2 3208 3310 -3 649 256 112 18 chr2 167656490 167656728 -85599855 + MIR SINE MIR 3 262 0 22 0 0 0 chr2 167656728 167656750 -85599833 + AT_rich Low_complexity Low_complexity 1 22 0 2153 103 10 7 chr2 167658082 167658384 -85598199 - AluSg SINE Alu -7 303 1 25 90 0 0 chr2 167658384 167658451 -85598132 + AT_rich Low_complexity Low_complexity 1 67 0 899 214 99 92 chr2 167658473 167659072 -85597511 - L1MC5 LINE L1 -621 7340 6761 1510 172 37 7 chr2 167659072 167659345 -85597238 - AluJb SINE Alu -31 281 1 899 214 99 92 chr2 167659345 167659567 -85597016 - L1MC5 LINE L1 -1200 6761 6542 2222 115 0 0 chr2 167659739 167660043 -85596540 - AluSx SINE Alu -8 304 1 1087 174 93 20 chr2 167660162 167660437 -85596146 + MLT1D LTR MaLR 1 309 -224 1842 244 109 26 chr2 167660660 167661169 -85595414 - MER69 DNA AcHobo -1899 627 63 2222 173 67 50 chr2 167661169 167661665 -85594918 - MLT1D LTR MaLR -1 504 1 1842 244 109 26 chr2 167661665 167661734 -85594849 - MER69 DNA AcHobo -2463 63 1 435 360 51 6 chr2 167661734 167662045 -85594538 - L1M4 LINE L1 -1665 4481 4157 915 218 43 28 chr2 167662230 167662441 -85594142 + MER20 DNA MER1_type 1 214 -5 369 328 80 67 chr2 167662691 167663142 -85593441 - HAL1 LINE L1 -899 1608 1152 2047 220 23 33 chr2 167663175 167663514 -85593069 - L1ME2 LINE L1 -6 6092 5760 2277 73 20 3 chr2 167663514 167663692 -85592891 - AluY SINE Alu -6 305 118 603 0 0 0 chr2 167663692 167663759 -85592824 + (TG)n Simple_repeat Simple_repeat 2 68 0 2277 73 20 3 chr2 167663759 167663880 -85592703 - AluY SINE Alu -193 118 1 2047 220 23 33 chr2 167663880 167664144 -85592439 - L1ME2 LINE L1 -338 5760 5495 2206 239 123 39 chr2 167664167 167665231 -85591352 - L1ME2 LINE L1 -1340 4740 3587 229 0 0 29 chr2 167665297 167665331 -85591252 - L1PA7 LINE L1 -8 6146 6114 4843 58 0 0 chr2 167665349 167665948 -85590635 + L1PA5 LINE L1 5556 6154 0 27836 125 27 65 chr2 167665949 167671504 -85585079 - L1P LINE L1 -795 5351 12 1004 272 42 20 chr2 167671524 167672071 -85584512 - L1ME2 LINE L1 -2466 3614 3056 320 333 78 0 chr2 167672078 167672231 -85584352 - L1ME2 LINE L1 -4765 1317 1153 1888 152 7 7 chr2 167672241 167672531 -85584052 - AluJo SINE Alu -22 290 1 911 239 74 60 chr2 167672541 167672691 -85583892 - L1ME2 LINE L1 -4946 1315 1169 1645 183 13 27 chr2 167672691 167672991 -85583592 - AluJo SINE Alu -16 296 1 911 239 74 60 chr2 167672991 167673323 -85583260 - L1ME2 LINE L1 -5092 1169 819 2697 39 0 0 chr2 167673323 167673632 -85582951 - AluY SINE Alu -2 309 1 911 239 74 60 chr2 167673632 167673780 -85582803 - L1ME2 LINE L1 -5442 819 675 * 2575 238 75 17 chr2 167673775 167674954 -85581629 - L1MEc LINE L1 -3020 3520 2314 595 243 22 0 chr2 167675060 167675241 -85581342 - L1MEc LINE L1 -4588 1952 1768 382 318 117 78 chr2 167675343 167675670 -85580913 - L1ME2 LINE L1 -5575 495 182 3762 121 24 95 chr2 167675670 167675806 -85580777 - L1MB2 LINE L1 -2 6169 6025 2450 96 0 3 chr2 167675806 167676119 -85580464 - AluSq SINE Alu -1 312 1 3762 121 24 95 chr2 167676119 167676264 -85580319 - L1MB2 LINE L1 -146 6025 5871 2523 54 3 0 chr2 167676264 167676560 -85580023 - AluSp SINE Alu -16 297 1 3762 121 24 95 chr2 167676560 167677097 -85579486 - L1MB2 LINE L1 -300 5871 5408 382 318 117 78 chr2 167677097 167677241 -85579342 - L1ME2 LINE L1 -5888 182 6 673 299 72 72 chr2 167677243 167678029 -85578554 - L1MEc LINE L1 -5575 1146 361 209 368 19 0 chr2 167679406 167679512 -85577071 + L2 LINE L2 1011 1118 -2196 284 163 20 0 chr2 167679532 167679581 -85577002 - LTR67 LTR ERVL -489 68 19 291 238 48 0 chr2 167680448 167680511 -85576072 - LTR67 LTR ERVL -490 67 2 2371 92 0 0 chr2 167680845 167681138 -85575445 + AluY SINE Alu 1 293 -18 1966 158 0 64 chr2 167681290 167681650 -85574933 - MER1B DNA MER1_type 0 337 1 202 64 0 85 chr2 167682004 167682051 -85574532 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 325 260 124 23 chr2 167682098 167682275 -85574308 - L1MC4a LINE L1 -1884 5924 5730 447 349 32 26 chr2 167682275 167682587 -85573996 - L1MC4a LINE L1 -1613 4533 4220 238 337 62 11 chr2 167682602 167682780 -85573803 - L1MC4a LINE L1 -2002 4144 3958 1732 175 0 7 chr2 167682861 167683153 -85573430 - AluJb SINE Alu -9 303 14 1010 198 0 10 chr2 167683502 167683759 -85572824 + AluJo SINE Alu 1 306 -6 6702 115 14 4 chr2 167683759 167685105 -85571478 + L1PA10 LINE L1 4278 5634 -534 605 125 0 21 chr2 167685103 167685199 -85571384 - L1P4 LINE L1 -600 5568 5475 * 3643 76 23 12 chr2 167685199 167685712 -85570871 + L1PA10 LINE L1 5647 6167 -1 378 287 102 12 chr2 167685783 167685950 -85570633 + L2 LINE L2 1818 1999 -1315 2194 115 3 0 chr2 167686136 167686432 -85570151 + AluSq SINE Alu 1 297 -16 276 240 54 54 chr2 167686515 167686644 -85569939 - L1ME4a LINE L1 0 6121 5993 351 222 0 0 chr2 167686683 167686746 -85569837 - MER2 DNA MER2_type -1 344 282 * 803 261 6 0 chr2 167686721 167686897 -85569686 - MER8 DNA MER2_type -60 179 3 387 0 0 0 chr2 167686897 167686940 -85569643 + (TCTA)n Simple_repeat Simple_repeat 2 44 0 1647 233 67 36 chr2 167687000 167687630 -85568953 - HAL1b LINE L1 -187 1161 513 11377 162 31 100 chr2 167687896 167690696 -85565887 + L1MA5A LINE L1 14 2549 -4240 1957 166 0 0 chr2 167690696 167690991 -85565592 + AluJb SINE Alu 1 295 -17 11377 162 31 100 chr2 167690991 167691256 -85565327 + L1MA5A LINE L1 2549 2831 -3958 1273 161 26 43 chr2 167691257 167691487 -85565096 + AluJo SINE Alu 1 226 -86 14258 169 28 21 chr2 167691487 167692615 -85563968 + L1MA5A LINE L1 2825 3943 -2996 1620 199 0 3 chr2 167692615 167692897 -85563686 - AluJo SINE Alu -24 288 8 14258 169 28 21 chr2 167692897 167695553 -85561030 + L1MA5A LINE L1 3943 6639 -300 1725 297 21 12 chr2 167695570 167696055 -85560528 - HERV16 LTR ERVL -2818 2178 1690 2548 53 0 3 chr2 167696097 167696397 -85560186 - AluY SINE Alu -12 299 1 1789 291 72 14 chr2 167696406 167696959 -85559624 - HERV16 LTR ERVL -3419 1577 993 459 0 0 0 chr2 167697163 167697214 -85559369 + (TTCC)n Simple_repeat Simple_repeat 2 52 0 416 331 33 0 chr2 167697265 167697416 -85559167 - HERV16 LTR ERVL -4155 841 686 795 315 93 13 chr2 167697489 167698078 -85558505 - HERV16 LTR ERVL -4330 666 1 500 294 79 17 chr2 167698084 167698261 -85558322 - LTR16A LTR ERVL -6 444 257 1626 144 11 23 chr2 167698382 167698645 -85557938 - AluJo SINE Alu -24 288 29 24 0 0 0 chr2 167698738 167698762 -85557821 + AT_rich Low_complexity Low_complexity 1 24 0 1736 162 4 4 chr2 167698765 167699043 -85557540 + AluJb SINE Alu 1 278 -34 270 0 0 0 chr2 167699043 167699073 -85557510 + (TC)n Simple_repeat Simple_repeat 1 30 0 * 432 0 0 0 chr2 167699072 167699120 -85557463 + (CA)n Simple_repeat Simple_repeat 1 48 0 197 203 17 102 chr2 167701041 167701100 -85555483 + L2 LINE L2 3219 3272 0 1412 254 75 54 chr2 167701933 167702066 -85554517 - L2 LINE L2 -15 3298 3169 1815 155 11 4 chr2 167702066 167702344 -85554239 + AluJb SINE Alu 1 280 -32 1412 254 75 54 chr2 167702344 167703015 -85553568 - L2 LINE L2 -144 3169 2470 226 376 55 0 chr2 167703588 167703697 -85552886 + L2 LINE L2 3199 3313 0 252 146 0 0 chr2 167704455 167704496 -85552087 + MADE1 DNA Mariner 40 80 0 26 0 0 0 chr2 167704901 167704927 -85551656 + AT_rich Low_complexity Low_complexity 1 26 0 1288 202 115 0 chr2 167704927 167705179 -85551404 - AluJo SINE Alu -31 281 1 189 132 0 0 chr2 167705307 167705345 -85551238 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 4879 180 10 16 chr2 167705365 167707013 -85549570 - L1MB5 LINE L1 -17 6157 4519 2272 113 0 0 chr2 167707022 167707322 -85549261 - AluSq SINE Alu 0 313 14 2377 150 83 0 chr2 167707332 167707791 -85548792 - L1MA9 LINE L1 0 6312 5816 23 33 0 0 chr2 167709426 167709456 -85547127 + AT_rich Low_complexity Low_complexity 1 30 0 31 26 0 0 chr2 167716504 167716542 -85540041 + GC_rich Low_complexity Low_complexity 1 38 0 2358 51 0 0 chr2 167716568 167716844 -85539739 - AluY SINE Alu 0 311 36 7399 173 25 20 chr2 167716844 167716889 -85539694 - L1MA9 LINE L1 -499 5813 5770 1518 152 126 4 chr2 167716889 167717158 -85539425 - AluSx SINE Alu 0 302 1 7399 173 25 20 chr2 167717158 167719104 -85537479 - L1MA9 LINE L1 -542 5770 3810 1057 199 90 28 chr2 167719110 167719497 -85537086 - L1MA9 LINE L1 -2766 3380 2970 1407 233 47 14 chr2 167719500 167719929 -85536654 - L1MB5 LINE L1 -1620 4526 4084 * 9022 163 18 1 chr2 167719912 167721550 -85535033 + L1P4 LINE L1 3698 5363 -783 11265 85 34 8 chr2 167721560 167723107 -85533476 + L1P3 LINE L1 1 1587 -4874 6865 57 6 2 chr2 167723114 167724444 -85532139 + L1PA7 LINE L1 4807 6140 -14 1940 89 18 4 chr2 167724488 167724769 -85531814 + L1P4 LINE L1 5352 5636 -529 635 114 38 0 chr2 167724766 167724871 -85531712 - L1MB3 LINE L1 -301 5882 5774 * 2774 161 37 42 chr2 167724890 167725571 -85531012 - L1MB3 LINE L1 -355 6064 5388 1793 57 4 37 chr2 167725606 167725852 -85530731 - L1PB1 LINE L1 -3 6148 5911 2852 148 94 49 chr2 167725897 167726027 -85530556 - L1MCa LINE L1 -4141 2285 2162 1621 199 0 0 chr2 167726027 167726308 -85530275 - AluJb SINE Alu -31 281 1 2852 148 94 49 chr2 167726308 167727329 -85529254 - L1MCa LINE L1 -4264 2162 991 5061 234 103 43 chr2 167727333 167729548 -85527035 - L1MB3 LINE L1 -2021 4361 2279 1874 183 0 3 chr2 167729548 167729860 -85526723 - AluJb SINE Alu -1 311 1 5061 234 103 43 chr2 167729860 167730141 -85526442 - L1MB3 LINE L1 -4103 2279 2016 2295 104 0 0 chr2 167730141 167730438 -85526145 - AluSx SINE Alu -11 301 5 5061 234 103 43 chr2 167730438 167730934 -85525649 - L1MB3 LINE L1 -4366 2016 1551 1854 183 0 0 chr2 167730934 167731229 -85525354 - AluJo SINE Alu -17 295 1 5061 234 103 43 chr2 167731229 167731276 -85525307 - L1MB3 LINE L1 -4831 1551 1508 1820 143 7 46 chr2 167731276 167731583 -85525000 - AluSq SINE Alu -18 295 1 5061 234 103 43 chr2 167731583 167732625 -85523958 - L1MB3 LINE L1 -4874 1508 111 3206 203 71 36 chr2 167732694 167733726 -85522857 - L1MDa LINE L1 -3933 2607 1540 483 272 173 6 chr2 167734074 167734236 -85522347 - MIR SINE MIR 0 262 74 745 200 30 96 chr2 167734289 167734415 -85522168 - L1MDa LINE L1 -4982 1558 1458 1744 161 13 23 chr2 167734415 167734720 -85521863 - AluJo SINE Alu -1 311 10 745 200 30 96 chr2 167734720 167734863 -85521720 - L1MDa LINE L1 -5082 1458 1307 14792 36 7 2 chr2 167734870 167737462 -85519121 - L1PA4 LINE L1 -2 6153 3553 4124 63 0 0 chr2 167737462 167737998 -85518585 - L1PA4 LINE L1 -4517 1629 1094 743 114 18 0 chr2 167737980 167738094 -85518489 - L1PA4 LINE L1 -6030 116 1 * 1032 202 20 134 chr2 167738093 167738113 -85518470 - L1MDa LINE L1 -5249 1291 1270 237 65 0 0 chr2 167738113 167738144 -85518439 + (TA)n Simple_repeat Simple_repeat 2 32 0 1032 202 20 134 chr2 167738144 167738578 -85518005 - L1MDa LINE L1 -5270 1270 889 1998 252 108 23 chr2 167738670 167738827 -85517756 - MLT1E2 LTR MaLR -1 625 483 2213 125 33 22 chr2 167738827 167739187 -85517396 + THE1B LTR MaLR 1 364 0 1998 252 108 23 chr2 167739187 167739605 -85516978 - MLT1E2 LTR MaLR -143 483 1 28 29 0 0 chr2 167740090 167740125 -85516458 + AT_rich Low_complexity Low_complexity 1 35 0 575 0 0 0 chr2 167740140 167740206 -85516377 - L1P1 LINE L1 -376 5779 5714 2774 30 0 6 chr2 167740206 167740538 -85516045 + L1PA2 LINE L1 5823 6155 0 2506 57 0 13 chr2 167740545 167740859 -85515724 + AluY SINE Alu 1 310 -1 230 270 32 16 chr2 167740865 167740991 -85515592 + L1 LINE L1 2335 2462 -3684 4022 242 61 43 chr2 167741426 167742574 -85514009 + L1M3b LINE L1 11 1137 -5213 2920 179 13 20 chr2 167742574 167743127 -85513456 - MER44D DNA MER2_type -1 604 1 4022 242 61 43 chr2 167743127 167743473 -85513110 + L1M3b LINE L1 1137 1475 -4875 2729 112 12 69 chr2 167743473 167743964 -85512619 + L1PA16 LINE L1 5704 6166 0 4022 242 61 43 chr2 167743964 167744860 -85511723 + L1M3b LINE L1 1475 2302 -4048 539 60 0 0 chr2 167744862 167744929 -85511654 + L1PA3 LINE L1 32 98 -6048 * 37446 34 26 3 chr2 167744898 167750344 -85506239 + L1PA3 LINE L1 580 6155 0 1623 220 135 0 chr2 167750339 167750909 -85505674 + L1M3b LINE L1 2288 2945 -3405 * 1042 150 12 95 chr2 167750906 167751017 -85505566 + L1MC2 LINE L1 6113 6193 -151 * 1590 199 14 3 chr2 167751017 167751314 -85505269 + AluJo SINE Alu 1 300 -12 1042 150 12 95 chr2 167751314 167751455 -85505128 + L1MC2 LINE L1 6193 6344 0 363 179 15 0 chr2 167751452 167751519 -85505064 + L1MC4 LINE L1 6935 7002 -1040 * 1099 216 48 11 chr2 167751562 167751901 -85504682 - L1ME2 LINE L1 -167 5999 5654 405 217 47 0 chr2 167751987 167752093 -85504490 + L1MC5 LINE L1 7001 7111 -850 308 312 124 26 chr2 167752119 167752465 -85504118 + L1MC4 LINE L1 7095 7474 -568 * 357 266 105 61 chr2 167752434 167752825 -85503758 + L1MC5 LINE L1 7270 7677 -284 913 288 113 18 chr2 167752856 167753559 -85503024 + L1ME3A LINE L1 4759 5596 -574 2532 34 3 3 chr2 167753559 167753855 -85502728 - AluY SINE Alu -15 296 1 913 288 113 18 chr2 167753855 167754181 -85502402 + L1ME3A LINE L1 5596 5890 -280 27 29 0 0 chr2 167754415 167754449 -85502134 + AT_rich Low_complexity Low_complexity 1 34 0 2028 121 13 3 chr2 167754589 167754895 -85501688 - AluSx SINE Alu -3 309 1 303 176 0 0 chr2 167755194 167755245 -85501338 - MSTA LTR MaLR -2 426 376 2064 148 104 0 chr2 167755245 167755610 -85500973 - MSTA LTR MaLR -24 404 2 2246 122 0 0 chr2 167756077 167756388 -85500195 - AluSx SINE Alu -1 311 1 2188 245 55 30 chr2 167756389 167757112 -85499471 - L1MC4a LINE L1 -1802 6006 5266 657 261 183 48 chr2 167757162 167758079 -85498504 - L1MC4a LINE L1 -988 5158 4121 296 354 31 19 chr2 167758316 167758477 -85498106 - L3b LINE CR1 -200 1383 1221 806 153 0 0 chr2 167758477 167758595 -85497988 + FLAM_C SINE Alu 2 119 -14 24 0 0 0 chr2 167758969 167758993 -85497590 + AT_rich Low_complexity Low_complexity 1 24 0 557 239 142 0 chr2 167759102 167759257 -85497326 + MER117 DNA MER1_type 1 177 -20 21 36 0 0 chr2 167763812 167763840 -85492743 + AT_rich Low_complexity Low_complexity 1 28 0 10270 34 1 0 chr2 167815201 167816455 -85440128 - L1P LINE L1 -1831 4315 3061 432 0 0 0 chr2 167816558 167816606 -85439977 + (CA)n Simple_repeat Simple_repeat 1 48 0 283 252 136 9 chr2 167818725 167818939 -85437644 - L1 LINE L1 -1785 4361 4121 309 354 31 19 chr2 167819176 167819337 -85437246 - L3b LINE CR1 -200 1383 1221 793 153 0 0 chr2 167819337 167819455 -85437128 + FLAM_C SINE Alu 2 119 -14 24 0 0 0 chr2 167819829 167819853 -85436730 + AT_rich Low_complexity Low_complexity 1 24 0 553 239 142 0 chr2 167819962 167820117 -85436466 + MER117 DNA MER1_type 1 177 -20 1217 195 52 9 chr2 167820559 167820812 -85435771 + L1MA5A LINE L1 2414 2639 -4210 1889 166 0 3 chr2 167820812 167821108 -85435475 + AluJb SINE Alu 1 295 -17 1217 195 52 9 chr2 167821108 167821373 -85435210 + L1MA5A LINE L1 2639 2891 -3958 1252 161 26 43 chr2 167821374 167821604 -85434979 + AluJo SINE Alu 1 226 -86 14440 170 27 20 chr2 167821604 167822732 -85433851 + L1MA5A LINE L1 2885 4003 -2996 1596 199 0 3 chr2 167822732 167823014 -85433569 - AluJo SINE Alu -24 288 8 14440 170 27 20 chr2 167823014 167825670 -85430913 + L1MA5A LINE L1 4003 6699 -300 1733 297 21 12 chr2 167825687 167826172 -85430411 - HERV16 LTR ERVL -2818 2178 1690 2510 53 0 3 chr2 167826214 167826514 -85430069 - AluY SINE Alu -12 299 1 1585 296 77 15 chr2 167826523 167827044 -85429539 - HERV16 LTR ERVL -3419 1577 1025 1481 150 128 4 chr2 167827146 167827412 -85429171 - AluSx SINE Alu -3 299 1 7500 170 27 16 chr2 167827413 167829359 -85427224 - L1M2 LINE L1 -533 5779 3810 1089 199 90 28 chr2 167829365 167829752 -85426831 - L1M2 LINE L1 -2766 3380 2970 1435 233 47 14 chr2 167829755 167830184 -85426399 - L1 LINE L1 -1620 4526 4084 * 8031 165 19 1 chr2 167830167 167831805 -85424778 + L1P4 LINE L1 3698 5363 -783 11202 87 34 8 chr2 167831815 167833362 -85423221 + L1P3 LINE L1 1 1587 -4874 6865 57 6 2 chr2 167833369 167834699 -85421884 + L1PA7 LINE L1 4807 6140 -14 1940 89 18 4 chr2 167834743 167835024 -85421559 + L1P4 LINE L1 5352 5636 -529 635 114 38 0 chr2 167835021 167835126 -85421457 - L1MB3 LINE L1 -301 5882 5774 * 2774 161 37 42 chr2 167835145 167835826 -85420757 - L1MB3 LINE L1 -355 6064 5388 1793 57 4 37 chr2 167835861 167836107 -85420476 - L1PB1 LINE L1 -3 6148 5911 2852 148 94 49 chr2 167836152 167836282 -85420301 - L1MCa LINE L1 -4141 2285 2162 1621 199 0 0 chr2 167836282 167836563 -85420020 - AluJb SINE Alu -31 281 1 2852 148 94 49 chr2 167836563 167837584 -85418999 - L1MCa LINE L1 -4264 2162 991 5061 240 83 14 chr2 167837588 167839386 -85417197 - L1MB3 LINE L1 -2021 4361 2441 4442 231 118 66 chr2 167839402 167839803 -85416780 - L1MB3 LINE L1 -3884 2500 2121 1874 183 0 3 chr2 167839803 167840115 -85416468 - AluJb SINE Alu -1 311 1 4442 231 118 66 chr2 167840115 167840396 -85416187 - L1MB3 LINE L1 -4263 2121 1856 2264 111 0 0 chr2 167840396 167840693 -85415890 - AluSx SINE Alu -11 301 5 4442 231 118 66 chr2 167840693 167841189 -85415394 - L1MB3 LINE L1 -4528 1856 1387 1854 183 0 0 chr2 167841189 167841484 -85415099 - AluJo SINE Alu -17 295 1 4442 231 118 66 chr2 167841484 167841531 -85415052 - L1MB3 LINE L1 -4997 1387 1344 1820 143 7 46 chr2 167841531 167841838 -85414745 - AluSq SINE Alu -18 295 1 4442 231 118 66 chr2 167841838 167842881 -85413702 - L1MB3 LINE L1 -5040 1344 111 3206 203 71 36 chr2 167842950 167843982 -85412601 - L1MDa LINE L1 -3933 2607 1540 483 272 173 6 chr2 167844330 167844492 -85412091 - MIR SINE MIR 0 262 74 745 200 30 96 chr2 167844545 167844671 -85411912 - L1MDa LINE L1 -4982 1558 1458 1744 161 13 23 chr2 167844671 167844976 -85411607 - AluJo SINE Alu -1 311 10 745 200 30 96 chr2 167844976 167845119 -85411464 - L1MDa LINE L1 -5082 1458 1307 5915 42 0 1 chr2 167845126 167845845 -85410738 - L1PA4 LINE L1 -2 6153 5436 1412 254 75 54 chr2 167846374 167846507 -85410076 - L2 LINE L2 -15 3298 3169 1815 155 11 4 chr2 167846507 167846785 -85409798 + AluJb SINE Alu 1 280 -32 1412 254 75 54 chr2 167846785 167847456 -85409127 - L2 LINE L2 -144 3169 2470 226 376 55 0 chr2 167848029 167848138 -85408445 + L2 LINE L2 3199 3313 0 252 146 0 0 chr2 167848896 167848937 -85407646 + MADE1 DNA Mariner 40 80 0 26 0 0 0 chr2 167849342 167849368 -85407215 + AT_rich Low_complexity Low_complexity 1 26 0 1288 202 115 0 chr2 167849368 167849620 -85406963 - AluJo SINE Alu -31 281 1 189 132 0 0 chr2 167849748 167849786 -85406797 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 4809 182 10 16 chr2 167849806 167851454 -85405129 - L1MB5 LINE L1 -17 6157 4519 2272 113 0 0 chr2 167851463 167851763 -85404820 - AluSq SINE Alu 0 313 14 2377 150 83 0 chr2 167851773 167852232 -85404351 - L1MA9 LINE L1 0 6312 5816 23 33 0 0 chr2 167853866 167853896 -85402687 + AT_rich Low_complexity Low_complexity 1 30 0 31 26 0 0 chr2 167860944 167860982 -85395601 + GC_rich Low_complexity Low_complexity 1 38 0 20536 42 54 6 chr2 167861109 167863785 -85392798 - L1P LINE L1 -2762 3384 580 539 60 0 0 chr2 167863754 167863821 -85392762 - L1P LINE L1 -6048 98 32 * 4026 251 67 39 chr2 167863823 167864719 -85391864 - L1M1 LINE L1 -4048 2302 1432 2729 112 12 69 chr2 167864719 167865210 -85391373 - L1PA16 LINE L1 0 6166 5704 4026 251 67 39 chr2 167865210 167865556 -85391027 - L1M1 LINE L1 -4918 1432 1097 2920 179 13 20 chr2 167865556 167866109 -85390474 + MER44D DNA MER2_type 1 604 -1 4026 251 67 39 chr2 167866109 167867257 -85389326 - L1M1 LINE L1 -5253 1097 11 230 270 32 16 chr2 167867692 167867818 -85388765 - L1 LINE L1 -3684 2462 2335 2493 60 0 13 chr2 167867824 167868138 -85388445 - AluY SINE Alu -1 310 1 2803 27 0 6 chr2 167868145 167868480 -85388103 - L1PA2 LINE L1 0 6155 5823 547 0 0 0 chr2 167868480 167868543 -85388040 + L1P1 LINE L1 5717 5779 -376 28 29 0 0 chr2 167868558 167868593 -85387990 + AT_rich Low_complexity Low_complexity 1 35 0 1998 252 108 23 chr2 167869078 167869496 -85387087 + MLT1E2 LTR MaLR 1 483 -143 2183 125 33 25 chr2 167869496 167869857 -85386726 - THE1B LTR MaLR 0 364 1 1998 252 108 23 chr2 167869857 167870014 -85386569 + MLT1E2 LTR MaLR 483 625 -1 1032 202 20 134 chr2 167870106 167870540 -85386043 + L1MDa LINE L1 889 1270 -5270 237 65 0 0 chr2 167870540 167870571 -85386012 + (TA)n Simple_repeat Simple_repeat 1 31 0 1032 202 20 134 chr2 167870571 167870591 -85385992 + L1MDa LINE L1 1270 1291 -5249 743 114 18 0 chr2 167870590 167870704 -85385879 + L1PA3 LINE L1 1 116 -6030 * 4124 66 0 7 chr2 167870686 167871222 -85385361 + L1PA3 LINE L1 1094 1627 -4519 15156 32 0 0 chr2 167871222 167873827 -85382756 + L1PA3 LINE L1 3553 6155 0 1609 218 136 3 chr2 167873827 167874393 -85382190 + L1M1 LINE L1 3508 4160 -3405 1042 150 12 95 chr2 167874390 167874501 -85382082 + L1MC2 LINE L1 6113 6193 -151 * 1590 199 14 3 chr2 167874501 167874798 -85381785 + AluJo SINE Alu 1 300 -12 1042 150 12 95 chr2 167874798 167874939 -85381644 + L1MC2 LINE L1 6193 6344 0 363 179 15 0 chr2 167874936 167875003 -85381580 + L1MC4 LINE L1 6935 7002 -1040 * 1099 216 48 11 chr2 167875046 167875385 -85381198 - L1ME2 LINE L1 -167 5999 5654 405 217 47 0 chr2 167875471 167875577 -85381006 + L1MC5 LINE L1 7001 7111 -850 308 312 124 26 chr2 167875603 167875949 -85380634 + L1MC4 LINE L1 7095 7474 -568 * 357 266 105 61 chr2 167875918 167876309 -85380274 + L1MC5 LINE L1 7270 7677 -284 913 288 113 18 chr2 167876340 167877043 -85379540 + L1ME3A LINE L1 4759 5596 -574 2497 34 3 7 chr2 167877043 167877340 -85379243 - AluY SINE Alu -15 296 1 913 288 113 18 chr2 167877340 167877666 -85378917 + L1ME3A LINE L1 5596 5890 -280 27 29 0 0 chr2 167877900 167877934 -85378649 + AT_rich Low_complexity Low_complexity 1 34 0 2028 121 13 3 chr2 167878074 167878380 -85378203 - AluSx SINE Alu -3 309 1 303 176 0 0 chr2 167878679 167878730 -85377853 - MSTA LTR MaLR -2 426 376 2064 148 104 0 chr2 167878730 167879095 -85377488 - MSTA LTR MaLR -24 404 2 2230 125 0 0 chr2 167879562 167879873 -85376710 - AluSx SINE Alu -1 311 1 2188 245 55 30 chr2 167879874 167880597 -85375986 - L1MC4a LINE L1 -1802 6006 5266 643 283 81 48 chr2 167880647 167881152 -85375431 - L1MC4a LINE L1 -988 5158 4637 332 264 137 28 chr2 167881358 167881570 -85375013 - L1MC4a LINE L1 -1797 4349 4115 21 36 0 0 chr2 167885967 167885995 -85370588 + AT_rich Low_complexity Low_complexity 1 28 0 403 267 86 9 chr2 167888848 167888964 -85367619 + L2 LINE L2 3178 3302 -11 671 119 10 0 chr2 167889350 167889451 -85367132 + U13 snRNA snRNA 3 104 0 283 222 17 43 chr2 167889580 167889607 -85366976 - L1MA4A LINE L1 -1 6302 6276 8519 170 18 21 chr2 167889607 167889960 -85366623 - L1PB4 LINE L1 -8 6850 6498 279 0 0 0 chr2 167889960 167889991 -85366592 + (TA)n Simple_repeat Simple_repeat 2 32 0 249 33 0 0 chr2 167889990 167890020 -85366563 + (CA)n Simple_repeat Simple_repeat 2 31 0 * 8519 170 18 21 chr2 167889991 167891247 -85365336 - L1PB4 LINE L1 -360 6498 5240 2238 128 19 27 chr2 167891247 167891614 -85364969 + THE1B LTR MaLR 1 364 0 11379 104 5 0 chr2 167891614 167893186 -85363397 + THE1B-int LTR MaLR 1 1580 0 2177 111 25 43 chr2 167893189 167893557 -85363026 + THE1B LTR MaLR 4 364 0 8519 170 18 21 chr2 167893557 167894633 -85361950 - L1PB4 LINE L1 -1619 5239 4196 1463 257 13 29 chr2 167894638 167895093 -85361490 - L1PB4 LINE L1 -4397 2452 2005 * 5901 89 48 1 chr2 167895087 167895938 -85360645 + L1PA11 LINE L1 5284 6174 0 1584 195 69 5 chr2 167895935 167896325 -85360258 - L1PB4 LINE L1 -4825 2024 1610 * 7221 49 0 0 chr2 167896491 167897817 -85358766 - L1PA5 LINE L1 0 6154 4829 9922 52 3 0 chr2 167897817 167899067 -85357516 + L1P LINE L1 3381 4634 -1512 1000 86 0 0 chr2 167899167 167899295 -85357288 - AluSg SINE Alu -182 128 1 1130 160 0 0 chr2 167899311 167899486 -85357097 + L1 LINE L1 3787 3961 -2185 25 0 0 0 chr2 167899660 167899685 -85356898 + AT_rich Low_complexity Low_complexity 1 25 0 450 283 48 14 chr2 167900401 167900546 -85356037 + MIR SINE MIR 110 259 -3 22 0 0 0 chr2 167900725 167900747 -85355836 + AT_rich Low_complexity Low_complexity 1 22 0 29 0 0 0 chr2 167901098 167901127 -85355456 + AT_rich Low_complexity Low_complexity 1 29 0 1985 137 17 0 chr2 167901776 167902075 -85354508 - AluSx SINE Alu -8 304 1 2260 145 3 3 chr2 167902120 167902478 -85354105 + L1PB4 LINE L1 5525 5882 -274 183 42 0 0 chr2 167903813 167903837 -85352746 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 15292 51 1 1 chr2 167906635 167909060 -85347523 - L1PA4 LINE L1 -280 5875 3451 2283 84 3 7 chr2 167909060 167909370 -85347213 - AluY SINE Alu -2 309 1 195 355 40 57 chr2 167909777 167909901 -85346682 - L2 LINE L2 -217 3055 2934 * 566 304 9 51 chr2 167909888 167910102 -85346481 - MIR SINE MIR -10 252 48 492 292 110 14 chr2 167910603 167910812 -85345771 - MIR SINE MIR -3 259 31 503 269 146 14 chr2 167911030 167911249 -85345334 - MIR SINE MIR -1 261 14 2214 132 14 0 chr2 167911498 167911869 -85344714 - L1MA4 LINE L1 -11 6289 5914 3174 109 15 4 chr2 167911869 167912348 -85344235 + L1MA4 LINE L1 5407 5890 -410 1091 297 25 2 chr2 167913071 167913459 -85343124 + L1ME4a LINE L1 5478 5882 -239 244 239 0 87 chr2 167913496 167913588 -85342995 + L1ME4a LINE L1 5982 6065 -56 485 305 137 14 chr2 167914694 167915051 -85341532 - L1ME4a LINE L1 -195 5926 5526 438 304 54 34 chr2 167915283 167915431 -85341152 + MIR3 SINE MIR 20 170 -38 1074 170 64 17 chr2 167915579 167915859 -85340724 + MLT1A1 LTR MaLR 1 374 0 461 333 162 18 chr2 167916432 167916828 -85339755 + L2 LINE L2 2455 2907 -407 326 333 131 31 chr2 167916861 167917083 -85339500 + L2 LINE L2 3029 3272 0 237 108 0 0 chr2 167919050 167919087 -85337496 + (TG)n Simple_repeat Simple_repeat 2 38 0 1798 110 44 4 chr2 167920960 167921232 -85335351 - AluSx SINE Alu -29 283 1 313 257 83 49 chr2 167921296 167921440 -85335143 + L1ME4a LINE L1 5925 6073 -48 25 0 0 0 chr2 167921471 167921496 -85335087 + AT_rich Low_complexity Low_complexity 1 25 0 1909 120 73 25 chr2 167921685 167922043 -85334540 + THE1C LTR MaLR 1 375 0 272 358 91 29 chr2 167922154 167922397 -85334186 + L3b LINE CR1 1317 1574 -9 662 207 0 8 chr2 167922865 167922986 -85333597 + Tigger3(Golem) DNA MER2_type 3 122 -2907 * 4398 110 46 15 chr2 167922972 167923688 -85332895 + Tigger3(Golem) DNA MER2_type 2285 3022 -7 6405 83 18 10 chr2 167924077 167925030 -85331553 + L1PA10 LINE L1 5209 6168 0 2158 109 26 3 chr2 167925328 167925675 -85330908 + L1MA2 LINE L1 5950 6304 0 24 91 0 0 chr2 167926302 167926368 -85330215 + AT_rich Low_complexity Low_complexity 1 66 0 21 57 0 0 chr2 167927344 167927379 -85329204 + AT_rich Low_complexity Low_complexity 1 35 0 2121 130 5 46 chr2 167927635 167928005 -85328578 - L1MA9 LINE L1 -278 6034 5680 209 95 0 24 chr2 167929944 167929986 -85326597 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 2975 41 3 3 chr2 167929986 167930355 -85326228 - L1PA5 LINE L1 -16 6138 5770 2571 29 0 10 chr2 167930365 167930679 -85325904 - L1PA3 LINE L1 -3 6152 5842 26 50 0 0 chr2 167930985 167931025 -85325558 + AT_rich Low_complexity Low_complexity 1 40 0 386 250 62 0 chr2 167932350 167932446 -85324137 - L2 LINE L2 -33 3280 3179 201 217 22 0 chr2 167932708 167932754 -85323829 + (TA)n Simple_repeat Simple_repeat 1 47 0 628 308 161 14 chr2 167933273 167933621 -85322962 + L3 LINE CR1 1123 1521 -56 242 148 19 0 chr2 167934413 167934467 -85322116 + (CA)n Simple_repeat Simple_repeat 2 56 0 542 301 106 13 chr2 167934987 167935213 -85321370 + MIR SINE MIR 16 262 0 219 254 0 0 chr2 167935298 167935361 -85321222 + T-rich Low_complexity Low_complexity 2 64 0 192 188 0 0 chr2 167935375 167935407 -85321176 - MIR SINE MIR -14 248 217 1487 169 42 82 chr2 167936103 167936481 -85320102 + MLT1A1 LTR MaLR 3 365 0 1141 136 0 6 chr2 167936565 167936741 -85319842 + L1PA16 LINE L1 5976 6150 -16 24 53 0 0 chr2 167937383 167937421 -85319162 + AT_rich Low_complexity Low_complexity 1 38 0 545 141 24 0 chr2 167937476 167937561 -85319022 + FLAM_A SINE Alu 38 124 -18 2065 138 0 0 chr2 167938758 167939054 -85317529 + AluSx SINE Alu 1 296 -16 365 213 64 11 chr2 167939270 167939364 -85317219 + MIR SINE MIR 77 175 -87 22 0 0 0 chr2 167939383 167939405 -85317178 + AT_rich Low_complexity Low_complexity 1 22 0 428 312 0 36 chr2 167939788 167939926 -85316657 - L2 LINE L2 -13 3300 3168 301 301 23 45 chr2 167940606 167940739 -85315844 + MIR3 SINE MIR 79 208 0 236 139 0 0 chr2 167941958 167941994 -85314589 - MER103 DNA DNA -71 95 60 2105 189 33 0 chr2 167942044 167942441 -85314142 + MSTB1 LTR MaLR 1 410 -22 674 299 34 10 chr2 167942762 167942969 -85313614 - MIR SINE MIR -10 252 41 2580 240 39 13 chr2 167943604 167944305 -85312278 - L1ME3 LINE L1 -7 6155 5437 323 333 23 30 chr2 167944463 167944595 -85311988 - L2 LINE L2 -5 3267 3137 306 0 0 0 chr2 167944817 167944851 -85311732 + (TG)n Simple_repeat Simple_repeat 2 35 0 256 406 19 45 chr2 167945226 167945381 -85311202 + L2 LINE L2 3027 3177 -95 475 147 32 0 chr2 167945820 167945915 -85310668 - L1MA9 LINE L1 0 6312 6215 281 303 115 0 chr2 167946449 167946571 -85310012 - MIR3 SINE MIR 0 208 73 304 259 129 14 chr2 167947284 167947431 -85309152 - MER103 DNA DNA -2 164 1 363 264 98 55 chr2 167947669 167948034 -85308549 - MLT1G1 LTR MaLR 0 595 182 36 94 0 0 chr2 167948041 167948147 -85308436 + AT_rich Low_complexity Low_complexity 1 106 0 233 286 40 40 chr2 167948160 167948286 -85308297 - MLT1G1 LTR MaLR -467 126 1 341 250 210 8 chr2 167948347 167948471 -85308112 + L2 LINE L2 3165 3313 0 2448 189 2 4 chr2 167948990 167949461 -85307122 - L1MB3 LINE L1 0 6183 5714 578 198 33 8 chr2 167949711 167949832 -85306751 + MIR SINE MIR 68 191 -71 703 304 57 22 chr2 167950337 167950464 -85306119 - MIR SINE MIR -8 254 113 1929 133 0 7 chr2 167950464 167950785 -85305798 + AluSx SINE Alu 11 329 0 703 304 57 22 chr2 167950785 167950886 -85305697 - MIR SINE MIR -149 113 17 218 302 163 16 chr2 167951043 167951172 -85305411 - L2 LINE L2 -81 3191 3044 23 86 0 0 chr2 167951460 167951518 -85305065 + AT_rich Low_complexity Low_complexity 1 58 0 257 319 40 53 chr2 167951518 167951744 -85304839 + L1ME LINE L1 5471 5693 -428 794 240 153 0 chr2 167952911 167953107 -85303476 + MIR SINE MIR 13 238 -24 188 329 57 0 chr2 167954222 167954292 -85302291 - L2 LINE L2 -280 2992 2919 732 269 43 24 chr2 167955838 167956091 -85300492 + MIR SINE MIR 4 261 -1 295 306 0 24 chr2 167956119 167956243 -85300340 + (TA)n Simple_repeat Simple_repeat 2 122 0 350 328 0 42 chr2 167956272 167956391 -85300192 - MIR SINE MIR -148 114 1 15683 139 28 10 chr2 167956516 167960081 -85296502 - L1PA10 LINE L1 -4 6164 2532 1079 150 10 0 chr2 167960081 167960272 -85296311 - L1PA3 LINE L1 -2 6153 5959 5832 157 18 12 chr2 167960373 167960823 -85295760 + L1MA8 LINE L1 4246 4692 -1519 210 37 0 0 chr2 167960823 167960850 -85295733 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5832 157 18 12 chr2 167960850 167961615 -85294968 + L1MA8 LINE L1 4692 5466 -745 1652 156 32 24 chr2 167961805 167962145 -85294438 + L1MA8 LINE L1 5946 6288 -3 29 78 0 0 chr2 167962336 167962400 -85294183 + AT_rich Low_complexity Low_complexity 1 64 0 6011 102 6 2 chr2 167963651 167964501 -85292082 - L1PA11 LINE L1 0 6174 5322 571 265 22 0 chr2 167965223 167965359 -85291224 + MIR SINE MIR 49 187 -75 827 188 44 12 chr2 167965611 167965771 -85290812 + MER7C DNA MER2_type 1 165 -437 326 235 59 0 chr2 167966226 167966311 -85290272 + L1MC4 LINE L1 6614 6703 -1339 216 0 0 0 chr2 167966311 167966335 -85290248 + (TG)n Simple_repeat Simple_repeat 2 25 0 * 393 75 0 0 chr2 167966334 167966387 -85290196 + (TA)n Simple_repeat Simple_repeat 2 54 0 6157 232 24 8 chr2 167967291 167968621 -85287962 - ERVL LTR ERVL -3578 2186 835 30 45 0 0 chr2 167969086 167969130 -85287453 + AT_rich Low_complexity Low_complexity 1 44 0 362 282 174 46 chr2 167970384 167970579 -85286004 - L2 LINE L2 -5 3267 3048 746 302 69 8 chr2 167970644 167970889 -85285694 + MIR SINE MIR 3 262 0 876 227 50 38 chr2 167972176 167972510 -85284073 - MSTD LTR MaLR -8 388 19 573 143 0 0 chr2 167973429 167973520 -85283063 - MER53 DNA DNA -4 185 95 652 307 34 84 chr2 167973589 167974029 -85282554 + LTR16A LTR ERVL 31 448 -2 1672 275 129 24 chr2 167974030 167974666 -85281917 + HERV16 LTR ERVL 2095 2797 -2199 4090 164 56 7 chr2 167975385 167975989 -85280594 - L1MB2 LINE L1 -57 6114 5463 324 0 0 0 chr2 167975989 167976025 -85280558 + (TG)n Simple_repeat Simple_repeat 2 37 0 4090 164 56 7 chr2 167976025 167976186 -85280397 - L1MB2 LINE L1 -708 5463 5311 76 12 0 0 chr2 167976217 167976300 -85280283 + AT_rich Low_complexity Low_complexity 1 83 0 2584 128 22 14 chr2 167977560 167978005 -85278578 - L1MA9 LINE L1 0 6312 5864 1046 175 0 48 chr2 167978005 167978234 -85278349 - L1MA9 LINE L1 -764 5382 5165 638 278 135 27 chr2 167978246 167978755 -85277828 - L1MEd LINE L1 -892 1598 929 223 345 58 11 chr2 167978987 167979074 -85277509 + L2 LINE L2 2964 3054 -218 263 193 0 0 chr2 167979221 167979278 -85277305 + L1P5 LINE L1 5739 5795 -361 218 149 43 0 chr2 167979294 167979341 -85277242 + (CA)n Simple_repeat Simple_repeat 2 50 0 22 0 0 0 chr2 167979373 167979395 -85277188 + AT_rich Low_complexity Low_complexity 1 22 0 304 288 12 22 chr2 167979396 167979560 -85277023 - MIR SINE MIR 0 262 34 1064 260 111 77 chr2 167981721 167982225 -85274358 - LTR33 LTR ERVL 0 521 1 1699 268 30 8 chr2 167982303 167982810 -85273773 + L1MC4a LINE L1 5553 6070 -1738 779 259 58 4 chr2 167983414 167983657 -85272926 - MER112 DNA MER1_type 0 256 1 1973 126 20 27 chr2 167983707 167984008 -85272575 + AluSx SINE Alu 1 299 -13 2021 108 7 3 chr2 167984677 167984973 -85271610 + AluSx SINE Alu 14 310 -2 4440 130 14 8 chr2 167984997 167985729 -85270854 + L1MA3 LINE L1 5570 6305 0 1402 165 42 39 chr2 167985732 167986066 -85270517 + L1MA9 LINE L1 5814 6148 -164 314 27 0 0 chr2 167986079 167986116 -85270467 + tRNA-Tyr-TAC tRNA tRNA 1 37 -39 1360 197 75 0 chr2 167986127 167986406 -85270177 - AluJb SINE Alu -12 300 1 536 161 66 80 chr2 167986408 167986545 -85270038 + L1MA9 LINE L1 6138 6272 -40 10622 181 43 29 chr2 167986581 167988741 -85267842 + MER21-int LTR ERV1 1744 3933 -258 2032 191 48 5 chr2 167988742 167989120 -85267463 + MER57A LTR ERV1 1 394 -9 3226 218 38 48 chr2 167989128 167989963 -85266620 + MER57A-int LTR ERV1 5 831 -6706 419 303 0 21 chr2 167990055 167990200 -85266383 + MER57A-int LTR ERV1 841 982 -4141 525 212 139 82 chr2 167990206 167990246 -85266337 + MER34C LTR ERV1 155 191 -394 1548 185 7 28 chr2 167990246 167990558 -85266025 + AluJb SINE Alu 2 307 0 525 212 139 82 chr2 167990558 167990639 -85265944 + MER34C LTR ERV1 191 266 -319 2644 112 3 0 chr2 167990639 167991013 -85265570 + THE1C LTR MaLR 1 375 0 525 212 139 82 chr2 167991013 167991134 -85265449 + MER34C LTR ERV1 266 413 -172 272 194 0 0 chr2 167991206 167991268 -85265315 + MER57A-int LTR ERV1 1128 1189 -3682 21 71 0 0 chr2 167991284 167991326 -85265257 + AT_rich Low_complexity Low_complexity 1 42 0 1051 184 38 65 chr2 167991360 167991621 -85264962 + MER21B-int LTR ERV1 3087 3340 -2991 480 274 34 0 chr2 167991667 167991784 -85264799 + MER21B-int LTR ERV1 3344 3464 -2867 560 206 22 40 chr2 167991892 167992232 -85264351 + MER21B-int LTR ERV1 1711 2104 -3019 202 56 56 0 chr2 167992232 167992268 -85264315 + (TA)n Simple_repeat Simple_repeat 2 39 0 1604 153 71 42 chr2 167992269 167992622 -85263961 - THE1C LTR MaLR -12 363 1 2214 116 14 14 chr2 167992841 167993196 -85263387 - THE1A LTR MaLR 0 355 1 11071 88 9 25 chr2 167993196 167994756 -85261827 - THE1A-int LTR MaLR 0 1580 46 567 191 8 53 chr2 167994756 167994887 -85261696 + MER21B-int LTR ERV1 4020 4144 -47 2549 207 53 0 chr2 167994964 167995433 -85261150 + MER21B LTR ERV1 1 494 -369 21 36 0 0 chr2 167995452 167995480 -85261103 + AT_rich Low_complexity Low_complexity 1 28 0 371 266 130 49 chr2 167995830 167996014 -85260569 - HAL1 LINE L1 0 2507 2309 289 247 0 0 chr2 167996013 167996086 -85260497 - L1M4 LINE L1 -3111 3035 2963 * 195 160 100 80 chr2 167996232 167996282 -85260301 - L2 LINE L2 0 3272 3222 390 299 146 0 chr2 167996711 167996855 -85259728 - L3 LINE CR1 -33 1544 1380 190 154 64 0 chr2 167996922 167997000 -85259583 + (TAGA)n Simple_repeat Simple_repeat 3 85 0 389 324 52 35 chr2 167997030 167997203 -85259380 - L3 LINE CR1 -210 1367 1192 1067 207 25 8 chr2 167997514 167997751 -85258832 - L1 LINE L1 -2427 3719 3479 6673 174 26 10 chr2 167997752 167999710 -85256873 + L1MB1 LINE L1 3988 5977 -191 5637 55 10 0 chr2 167999710 168000422 -85256161 + L1PA7 LINE L1 5435 6153 -1 250 167 62 0 chr2 168000422 168000470 -85256113 - L1 LINE L1 -3458 2688 2638 1002 196 32 0 chr2 168000470 168000689 -85255894 + L1MB1 LINE L1 5942 6167 -1 805 184 24 24 chr2 168000887 168001094 -85255489 + L1MC3 LINE L1 6906 7090 -695 389 194 78 19 chr2 168001107 168001210 -85255373 + MLT1F1 LTR MaLR 39 147 -420 584 75 0 12 chr2 168001210 168001290 -85255293 + L1MD3 LINE L1 7424 7502 -493 7177 175 63 36 chr2 168001290 168002923 -85253660 - MER52A LTR ERV1 0 1755 1 2430 179 33 16 chr2 168002924 168003416 -85253167 + L1MD3 LINE L1 6208 6342 -2 28 29 0 0 chr2 168003649 168003684 -85252899 + AT_rich Low_complexity Low_complexity 1 35 0 249 227 195 16 chr2 168003776 168003904 -85252679 + L1ME LINE L1 5319 5469 -2339 1611 153 35 7 chr2 168003908 168004190 -85252393 - AluJb SINE Alu -22 290 1 287 254 143 38 chr2 168004345 168004554 -85252029 + L1MD3 LINE L1 5686 5916 -1892 225 310 64 96 chr2 168005053 168005286 -85251297 + MIR3 SINE MIR 5 225 -37 23 0 0 0 chr2 168008387 168008410 -85248173 + AT_rich Low_complexity Low_complexity 1 23 0 1531 179 47 0 chr2 168008781 168009060 -85247523 - AluJo SINE Alu -18 294 3 208 239 0 0 chr2 168009185 168009231 -85247352 + A-rich Low_complexity Low_complexity 3 48 0 822 181 0 19 chr2 168012447 168012607 -85243976 + FAM SINE Alu 1 157 -18 645 49 0 0 chr2 168012609 168012690 -85243893 + (GGAA)n Simple_repeat Simple_repeat 3 83 0 302 244 0 26 chr2 168012807 168012885 -85243698 + L1ME LINE L1 5532 5607 -514 * 1090 218 83 65 chr2 168012879 168013251 -85243332 + L1MD3 LINE L1 6771 7149 -846 * 6415 149 30 5 chr2 168013249 168014411 -85242172 - L1MA6 LINE L1 -1751 4395 3205 5036 154 34 37 chr2 168014405 168015766 -85240817 + L1MA6 LINE L1 4399 5779 -521 * 1985 116 3 14 chr2 168015776 168016061 -85240522 + AluSx SINE Alu 1 282 -30 240 35 0 0 chr2 168016061 168016090 -85240493 + (TC)n Simple_repeat Simple_repeat 2 30 0 240 143 0 0 chr2 168016092 168016134 -85240449 + (TA)n Simple_repeat Simple_repeat 2 43 0 316 234 21 43 chr2 168016134 168016228 -85240355 - L1MC4 LINE L1 -1337 6705 6614 1380 188 0 92 chr2 168016259 168016584 -85239999 + AluJo SINE Alu 1 295 -17 1883 125 24 17 chr2 168016584 168016871 -85239712 + AluSq SINE Alu 1 289 -24 3082 130 15 26 chr2 168016905 168017055 -85239528 + L1MA6 LINE L1 5773 5923 -377 8050 129 20 3 chr2 168017055 168018333 -85238250 + HSMAR2 DNA Mariner 1 1300 -2 3082 130 15 26 chr2 168018333 168018711 -85237872 + L1MA6 LINE L1 5923 6295 -5 1911 241 123 5 chr2 168018727 168019378 -85237205 + L1MC4a LINE L1 7081 7808 0 407 340 75 19 chr2 168019647 168019859 -85236724 - MIR SINE MIR -27 235 12 482 213 0 0 chr2 168020040 168020120 -85236463 - Tigger5 DNA MER2_type -2 2321 2242 342 253 0 0 chr2 168020110 168020189 -85236394 + Tigger5 DNA MER2_type 2242 2320 -3 * 302 210 16 0 chr2 168020189 168020250 -85236333 - Tigger5 DNA MER2_type -2245 78 17 22 0 0 0 chr2 168020412 168020434 -85236149 + AT_rich Low_complexity Low_complexity 1 22 0 431 338 13 6 chr2 168020471 168020628 -85235955 - MER5A DNA MER1_type -6 183 26 1622 146 14 4 chr2 168021950 168022231 -85234352 - L1MB7 LINE L1 -1 6183 5900 468 321 42 0 chr2 168022385 168022550 -85234033 + MIR SINE MIR 53 224 -38 361 264 0 138 chr2 168022657 168022816 -85233767 + MIR3 SINE MIR 38 174 -34 752 210 33 0 chr2 168022885 168023066 -85233517 + L1MC1 LINE L1 3587 3773 -2373 4624 146 52 1 chr2 168023066 168023880 -85232703 + L1MC1 LINE L1 5477 6331 -2 885 288 62 0 chr2 168023954 168024246 -85232337 + Charlie7 DNA MER1_type 24 333 -2279 21 57 0 0 chr2 168024406 168024441 -85232142 + AT_rich Low_complexity Low_complexity 1 35 0 335 319 18 18 chr2 168025337 168025450 -85231133 + L2 LINE L2 3177 3289 -24 315 278 172 17 chr2 168026128 168026308 -85230275 - MIR SINE MIR -1 261 54 423 305 64 14 chr2 168026502 168026643 -85229940 + MIR SINE MIR 41 188 -74 414 0 0 0 chr2 168028162 168028208 -85228375 + (CA)n Simple_repeat Simple_repeat 2 47 0 22 56 0 0 chr2 168029984 168030020 -85226563 + AT_rich Low_complexity Low_complexity 1 36 0 26 88 0 0 chr2 168030347 168030415 -85226168 + AT_rich Low_complexity Low_complexity 1 68 0 2386 138 42 22 chr2 168032069 168032475 -85224108 - Tigger2a DNA MER2_type -16 418 5 210 263 232 0 chr2 168032955 168033054 -85223529 - L2 LINE L2 -8 3305 3184 458 244 32 8 chr2 168034123 168034246 -85222337 - L1ME4a LINE L1 -30 6091 5966 29 78 0 0 chr2 168034859 168034923 -85221660 + AT_rich Low_complexity Low_complexity 1 64 0 409 292 154 51 chr2 168035034 168035229 -85221354 - L2 LINE L2 -1 3271 3057 319 353 16 8 chr2 168035520 168035642 -85220941 - MER5A DNA MER1_type -12 177 55 778 282 57 4 chr2 168035829 168036077 -85220506 - MIR SINE MIR 0 262 2 199 345 170 47 chr2 168036635 168037142 -85219441 - L2 LINE L2 -400 2914 2346 683 244 116 45 chr2 168037142 168037384 -85219199 + MIR SINE MIR 3 261 -1 670 287 62 68 chr2 168038668 168039037 -85217546 - L2 LINE L2 -5 3308 2942 * 768 242 157 8 chr2 168039033 168039281 -85217302 - L2 LINE L2 -638 2676 2392 416 256 158 35 chr2 168039286 168039489 -85217094 - L2 LINE L2 -1390 1924 1697 362 320 41 0 chr2 168040109 168040231 -85216352 + L2 LINE L2 3187 3313 0 242 234 62 0 chr2 168041374 168041438 -85215145 + MLT1K LTR MaLR 203 270 -318 211 208 75 38 chr2 168041812 168041865 -85214718 - MIR SINE MIR -67 141 87 315 352 9 0 chr2 168042346 168042451 -85214132 - MER5A DNA MER1_type -80 109 4 346 225 107 47 chr2 168042502 168042671 -85213912 + L2 LINE L2 2951 3129 -184 2192 241 57 60 chr2 168042674 168043476 -85213107 + L1MEc LINE L1 29 828 -5568 * 3448 159 0 36 chr2 168043474 168044158 -85212425 + L1P LINE L1 4557 5215 -931 6452 80 13 1 chr2 168044158 168045193 -85211390 + L1PA13 LINE L1 5116 6161 -2 3537 195 73 61 chr2 168045193 168045547 -85211036 + L1MB7 LINE L1 4484 4832 -1352 513 0 0 0 chr2 168045547 168045604 -85210979 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 3537 195 73 61 chr2 168045604 168046941 -85209642 + L1MB7 LINE L1 4832 6174 -10 1313 232 76 25 chr2 168046946 168047554 -85209029 + L1MEc LINE L1 1627 2265 -4131 219 250 19 0 chr2 168047608 168047660 -85208923 + L2 LINE L2 3255 3307 -6 27 29 0 0 chr2 168047766 168047800 -85208783 + AT_rich Low_complexity Low_complexity 1 34 0 22 35 0 0 chr2 168049016 168049045 -85207538 + AT_rich Low_complexity Low_complexity 1 29 0 4599 182 23 10 chr2 168049467 168050678 -85205905 - L1MB5 LINE L1 -8 6166 4941 919 104 0 37 chr2 168050681 168050815 -85205768 + AluJb SINE Alu 5 133 -179 2565 173 87 35 chr2 168050844 168051473 -85205110 - L1MB7 LINE L1 -10 6174 5513 1550 206 34 43 chr2 168051473 168051910 -85204673 - L1MB5 LINE L1 -1183 4963 4531 338 279 0 35 chr2 168052285 168052371 -85204212 - MER5A DNA MER1_type -98 91 9 687 201 6 19 chr2 168052389 168052548 -85204035 + MER5B DNA MER1_type 21 177 -1 801 244 105 29 chr2 168052940 168053328 -85203255 + L1ME LINE L1 5220 5636 -534 340 65 5 136 chr2 168053333 168053409 -85203174 + Alu SINE Alu 245 301 -1 329 286 0 0 chr2 168053411 168053530 -85203053 + L1ME LINE L1 5644 5762 -400 481 224 109 38 chr2 168053576 168053759 -85202824 - MIR SINE MIR -21 241 46 6955 185 33 9 chr2 168053767 168056125 -85200458 - L1PA16 LINE L1 0 6166 3713 603 175 329 7 chr2 168056162 168056305 -85200278 + MER5A DNA MER1_type 1 189 0 1675 195 3 7 chr2 168057326 168057628 -85198955 - AluSx SINE Alu -11 301 1 1335 307 68 53 chr2 168058218 168059065 -85197518 + L1M3b LINE L1 1226 2085 -5411 30 0 0 0 chr2 168059089 168059119 -85197464 + AT_rich Low_complexity Low_complexity 1 30 0 2205 247 67 36 chr2 168059119 168059801 -85196782 + L1M3b LINE L1 2097 2756 -4809 213 65 0 0 chr2 168059801 168059832 -85196751 + (TG)n Simple_repeat Simple_repeat 2 32 0 2205 247 67 36 chr2 168059832 168060665 -85195918 + L1M3b LINE L1 2756 3636 -3929 1386 170 52 48 chr2 168060675 168060946 -85195637 + AluJo SINE Alu 11 282 -30 378 42 0 0 chr2 168060949 168060997 -85195586 + (CA)n Simple_repeat Simple_repeat 2 49 0 7569 211 29 22 chr2 168060998 168061228 -85195355 + L1M3b LINE L1 3632 3859 -3706 11174 33 0 3 chr2 168061228 168063347 -85193236 + L1PA4 LINE L1 4022 6154 -1 7569 211 29 22 chr2 168063347 168064987 -85191596 + L1M3b LINE L1 3859 5516 -2049 4372 129 32 61 chr2 168064987 168065868 -85190715 + L1MA9 LINE L1 5456 6310 -2 725 132 20 26 chr2 168065869 168066021 -85190562 + L1MA9 LINE L1 6160 6310 -2 1147 167 38 0 chr2 168067234 168067444 -85189139 + L1PA16 LINE L1 5932 6149 -17 25 31 0 0 chr2 168067444 168067476 -85189107 + AT_rich Low_complexity Low_complexity 1 32 0 2301 105 0 6 chr2 168067812 168068127 -85188456 - AluSq SINE Alu 0 313 1 2132 83 18 0 chr2 168068351 168068668 -85187915 - AluSx SINE Alu 0 322 1 390 249 145 25 chr2 168068694 168069044 -85187539 - L1MC/D LINE L1 -351 5770 5415 543 215 153 21 chr2 168069147 168069291 -85187292 + MIR SINE MIR 3 165 -97 365 269 81 11 chr2 168069334 168069520 -85187063 - L1MC/D LINE L1 -860 5286 5088 28 61 0 0 chr2 168070229 168070278 -85186305 + AT_rich Low_complexity Low_complexity 1 49 0 25 0 0 0 chr2 168071024 168071049 -85185534 + AT_rich Low_complexity Low_complexity 1 25 0 2276 153 53 8 chr2 168071091 168071470 -85185113 + MSTB LTR MaLR 31 426 0 24 0 0 0 chr2 168071936 168071960 -85184623 + AT_rich Low_complexity Low_complexity 1 24 0 1846 155 7 3 chr2 168073441 168073737 -85182846 + AluJb SINE Alu 1 297 -15 254 400 53 24 chr2 168073781 168074154 -85182429 + L2 LINE L2 2811 3272 0 9712 201 85 19 chr2 168074320 168076661 -85179922 + L1MDa LINE L1 27 2521 -4019 3677 126 34 90 chr2 168076663 168077495 -85179088 - LTR1 LTR ERV1 0 785 1 1507 166 3 75 chr2 168077550 168077857 -85178726 + AluJo SINE Alu 6 290 -22 1152 271 34 11 chr2 168077864 168078310 -85178273 + L1MDa LINE L1 3658 4113 -2427 * 2576 194 60 15 chr2 168078277 168079305 -85177278 + L1PA15 LINE L1 4895 5973 -586 229 121 61 20 chr2 168079337 168079436 -85177147 + (TA)n Simple_repeat Simple_repeat 2 104 0 2910 144 2 33 chr2 168079491 168080005 -85176578 + L1PA15 LINE L1 6062 6559 0 1130 186 7 81 chr2 168080095 168080260 -85176323 + L1MD1 LINE L1 5167 5343 -899 1505 123 100 16 chr2 168080260 168080534 -85176049 + AluSx SINE Alu 14 308 0 1130 186 7 81 chr2 168080534 168080739 -85175844 + L1MD1 LINE L1 5343 5520 -722 1399 164 50 47 chr2 168080741 168081082 -85175501 + L1MD1 LINE L1 5901 6242 0 319 193 35 0 chr2 168081325 168081382 -85175201 - MIR3 SINE MIR -31 177 119 2559 268 86 90 chr2 168081416 168083031 -85173552 + L1M2 LINE L1 13 1621 -5228 11441 51 3 0 chr2 168084942 168086380 -85170203 - L1P LINE L1 -1325 4821 3380 3721 47 0 0 chr2 168086379 168086847 -85169736 + L1P LINE L1 4829 5296 -850 * 256 362 60 0 chr2 168087070 168087186 -85169397 - L3 LINE CR1 -392 1185 1063 476 228 4 3 chr2 168087347 168087468 -85169115 - L1ME1 LINE L1 -50 6116 6016 2890 263 37 28 chr2 168087479 168088267 -85168316 - L1M4 LINE L1 -1822 4324 3522 1957 138 10 3 chr2 168088267 168088558 -85168025 - AluSx SINE Alu -14 298 6 2890 263 37 28 chr2 168088558 168088877 -85167706 - L1M4 LINE L1 -2624 3522 3207 * 3327 272 86 22 chr2 168088861 168089925 -85166658 - HAL1 LINE L1 -1044 1463 290 2049 152 0 0 chr2 168089925 168090228 -85166355 - AluSx SINE Alu -8 304 2 3327 272 86 22 chr2 168090228 168090538 -85166045 - HAL1 LINE L1 -2217 290 1 326 306 117 0 chr2 168090791 168090902 -85165681 - L2 LINE L2 -17 3255 3132 312 274 294 20 chr2 168091417 168091621 -85164962 - MIR SINE MIR 0 262 3 194 363 52 22 chr2 168091792 168091927 -85164656 - L2 LINE L2 0 3313 3175 208 296 0 0 chr2 168092230 168092274 -85164309 + L2 LINE L2 3017 3060 -253 223 326 151 0 chr2 168092322 168092408 -85164175 + L2 LINE L2 3174 3272 0 491 339 192 27 chr2 168092456 168093019 -85163564 - L2 LINE L2 -443 2871 2216 427 352 11 11 chr2 168093020 168093196 -85163387 - MER5B DNA MER1_type 0 178 3 4287 221 29 43 chr2 168093407 168095259 -85161324 + L1PA12 LINE L1 48 3178 -4406 2792 197 19 13 chr2 168095360 168095984 -85160599 - L1 LINE L1 -1781 5784 5157 * 15791 181 115 9 chr2 168095977 168099081 -85157502 - L1 LINE L1 -4122 3443 12 12202 204 43 24 chr2 168099142 168099874 -85156709 - L1M2 LINE L1 -564 5984 5268 324 0 0 0 chr2 168099874 168099910 -85156673 + (TG)n Simple_repeat Simple_repeat 1 36 0 12202 204 43 24 chr2 168099910 168102942 -85153641 - L1M2 LINE L1 -1280 5268 2121 277 131 33 82 chr2 168103041 168103102 -85153481 - L1M2 LINE L1 -6081 232 175 25 31 0 0 chr2 168103683 168103715 -85152868 + AT_rich Low_complexity Low_complexity 1 32 0 1754 169 103 20 chr2 168103892 168104276 -85152307 + L1MA8 LINE L1 5599 6014 -286 1011 142 64 0 chr2 168104277 168104481 -85152102 + L1MA8 LINE L1 6072 6288 -3 580 267 15 8 chr2 168104871 168105002 -85151581 + MIR SINE MIR 20 151 -111 204 40 0 0 chr2 168105058 168105083 -85151500 + (TAG)n Simple_repeat Simple_repeat 1 25 0 1727 152 7 47 chr2 168105293 168105639 -85150944 - AluSx SINE Alu 0 334 1 232 341 93 8 chr2 168106822 168106951 -85149632 + MIR3 SINE MIR 64 203 -5 2205 101 3 3 chr2 168107209 168107506 -85149077 - AluSg SINE Alu -13 297 1 248 309 27 13 chr2 168107674 168107823 -85148760 + L1ME LINE L1 5688 5838 -283 405 283 42 103 chr2 168107846 168108157 -85148426 - MLT1I LTR MaLR -2 407 116 1186 147 71 4 chr2 168108480 168108705 -85147878 + L1PA16 LINE L1 5916 6155 -11 305 303 19 74 chr2 168108723 168108885 -85147698 + MIR SINE MIR 51 203 -59 622 236 90 57 chr2 168108913 168109125 -85147458 - MIR SINE MIR -36 226 8 4667 164 5 21 chr2 168109753 168110279 -85146304 + L1P LINE L1 1694 2202 -3944 2156 110 7 0 chr2 168110279 168110570 -85146013 + AluSx SINE Alu 13 305 -7 4667 164 5 21 chr2 168110570 168110907 -85145676 + L1P LINE L1 2202 2543 -3603 7395 27 12 1 chr2 168110909 168112489 -85144094 + L1PA4 LINE L1 4566 6153 -2 564 209 19 51 chr2 168113219 168113377 -85143206 + MER5B DNA MER1_type 26 178 0 1747 131 47 68 chr2 168113427 168113808 -85142775 - THE1C LTR MaLR -2 373 1 359 269 75 0 chr2 168113834 168113927 -85142656 - MER5A DNA MER1_type -80 109 10 24 85 0 0 chr2 168113932 168113991 -85142592 + AT_rich Low_complexity Low_complexity 1 59 0 5773 122 18 3 chr2 168114040 168114931 -85141652 - L1PA16 LINE L1 -9 6157 5254 439 223 176 34 chr2 168114999 168115147 -85141436 - MER5B DNA MER1_type -9 169 1 2736 148 30 2 chr2 168116137 168116604 -85139979 + L1PA16 LINE L1 5683 6162 -4 313 361 105 11 chr2 168117267 168117544 -85139039 - L2 LINE L2 -1882 1432 1130 8863 221 58 3 chr2 168117566 168120547 -85136036 + L1PA16 LINE L1 3102 6151 -15 249 326 0 0 chr2 168121031 168121120 -85135463 + L1MEc LINE L1 1555 1643 -4753 188 359 9 19 chr2 168121511 168121617 -85134966 - L2 LINE L2 -2515 799 695 2193 116 51 23 chr2 168121723 168122077 -85134506 + THE1B LTR MaLR 1 364 0 11648 97 8 3 chr2 168122077 168123650 -85132933 + THE1B-int LTR MaLR 1 1580 0 2201 98 53 36 chr2 168123651 168124008 -85132575 + THE1B LTR MaLR 2 364 0 1577 127 16 0 chr2 168125022 168125266 -85131317 + MER44D DNA MER2_type 303 605 0 2756 155 20 6 chr2 168125267 168125777 -85130806 + L1MC2 LINE L1 5814 6330 -14 1371 202 49 69 chr2 168125990 168126381 -85130202 + MLT1B LTR MaLR 8 390 0 180 263 228 0 chr2 168127760 168127817 -85128766 + L2 LINE L2 410 479 -2835 938 261 172 20 chr2 168127852 168128201 -85128382 + L2 LINE L2 462 863 -2451 408 292 35 0 chr2 168128212 168128325 -85128258 + L2 LINE L2 3197 3313 0 241 202 48 24 chr2 168128898 168128982 -85127601 - LTR68 LTR ERV1 -651 89 4 261 259 12 62 chr2 168129008 168129089 -85127494 + MIR SINE MIR 180 256 -6 25 31 0 0 chr2 168129448 168129480 -85127103 + AT_rich Low_complexity Low_complexity 1 32 0 22 35 0 0 chr2 168130147 168130176 -85126407 + AT_rich Low_complexity Low_complexity 1 29 0 217 375 86 8 chr2 168131333 168131461 -85125122 - L2 LINE L2 -210 3062 2925 22 70 0 0 chr2 168131563 168131606 -85124977 + AT_rich Low_complexity Low_complexity 1 43 0 1005 252 134 42 chr2 168132159 168132623 -85123960 + MLT1H LTR MaLR 1 547 -2 23 0 0 0 chr2 168132638 168132661 -85123922 + AT_rich Low_complexity Low_complexity 1 23 0 456 290 52 0 chr2 168132971 168133126 -85123457 - MIR SINE MIR -6 256 94 1283 195 62 4 chr2 168133126 168133246 -85123337 + L1MA10 LINE L1 6046 6158 -176 246 81 0 0 chr2 168133246 168133283 -85123300 + (TAA)n Simple_repeat Simple_repeat 3 39 0 1283 195 62 4 chr2 168133283 168133434 -85123149 + L1MA10 LINE L1 6158 6333 -1 265 200 40 0 chr2 168133506 168133556 -85123027 + L2 LINE L2 3221 3272 0 614 298 6 6 chr2 168133905 168134063 -85122520 - MER63A DNA MER1_type 0 210 53 686 169 17 96 chr2 168134355 168134532 -85122051 - L1MA10 LINE L1 -125 6209 6047 246 266 101 0 chr2 168134533 168134612 -85121971 + MIR SINE MIR 94 180 -82 5361 206 21 11 chr2 168135237 168136697 -85119886 - L1P LINE L1 -1565 4581 3102 319 361 105 11 chr2 168136719 168136996 -85119587 + L2 LINE L2 1130 1432 -1882 2722 148 30 2 chr2 168137659 168138126 -85118457 - L1PA16 LINE L1 -4 6162 5683 437 223 176 34 chr2 168139116 168139264 -85117319 + MER5B DNA MER1_type 1 169 -9 5777 122 18 3 chr2 168139332 168140223 -85116360 + L1PA16 LINE L1 5254 6157 -9 24 85 0 0 chr2 168140272 168140331 -85116252 + AT_rich Low_complexity Low_complexity 1 59 0 357 269 75 0 chr2 168140336 168140429 -85116154 + MER5A DNA MER1_type 10 109 -80 1781 128 47 65 chr2 168140455 168140837 -85115746 + THE1C LTR MaLR 1 375 0 618 200 26 39 chr2 168140884 168141039 -85115544 - MER5B DNA MER1_type 0 178 26 14581 37 3 1 chr2 168141769 168144322 -85112261 - L1PA4 LINE L1 -2 6153 3594 28 0 0 0 chr2 168144677 168144705 -85111878 + AT_rich Low_complexity Low_complexity 1 28 0 2160 103 0 3 chr2 168144788 168145080 -85111503 - AluSg SINE Alu -19 291 1 2022 249 98 23 chr2 168145711 168146526 -85110057 - L1ME3A LINE L1 -133 6037 5175 727 236 47 0 chr2 168146767 168146915 -85109668 + FRAM SINE Alu 1 155 -11 1093 103 22 197 chr2 168147856 168147977 -85108606 + Tigger2 DNA MER2_type 1 33 -2685 1734 177 7 0 chr2 168147977 168148265 -85108318 + AluSx SINE Alu 1 290 -22 1093 103 22 197 chr2 168148265 168148463 -85108120 + Tigger2 DNA MER2_type 33 264 -2454 3794 152 12 15 chr2 168148876 168149534 -85107049 + Tigger2 DNA MER2_type 95 750 -1968 9142 144 49 4 chr2 168149611 168151115 -85105468 + Tigger2 DNA MER2_type 1147 2718 0 315 318 27 34 chr2 168152810 168152958 -85103625 + L2 LINE L2 3167 3313 0 256 346 93 45 chr2 168152974 168153329 -85103254 + L2 LINE L2 2067 2438 -876 2344 40 7 13 chr2 168153427 168153726 -85102857 - AluY SINE Alu -14 297 1 337 198 27 18 chr2 168154345 168154456 -85102127 + (TA)n Simple_repeat Simple_repeat 1 112 0 402 21 0 0 chr2 168154629 168154676 -85101907 + (TA)n Simple_repeat Simple_repeat 2 48 0 2208 121 30 30 chr2 168155562 168155926 -85100657 - THE1B LTR MaLR 0 364 1 373 324 93 55 chr2 168156575 168157014 -85099569 - L2 LINE L2 -33 3280 2825 320 249 104 23 chr2 168157302 168157475 -85099108 - L1ME3A LINE L1 -1643 4503 4317 1789 231 92 12 chr2 168157742 168158223 -85098360 + LTR40a LTR ERVL 1 519 0 991 255 78 93 chr2 168158224 168158574 -85098009 + HERVL40 LTR ERVL 1 340 -5190 2346 50 0 27 chr2 168158574 168158907 -85097676 - AluY SINE Alu 0 311 1 991 255 78 93 chr2 168158907 168159168 -85097415 + HERVL40 LTR ERVL 340 603 -4927 979 309 14 14 chr2 168159171 168159462 -85097121 + HERVL40 LTR ERVL 564 854 -4676 3314 253 22 10 chr2 168159479 168160284 -85096299 + HERVL40 LTR ERVL 3729 4543 -987 369 0 0 0 chr2 168160523 168160564 -85096019 + (CA)n Simple_repeat Simple_repeat 2 42 0 2200 114 0 3 chr2 168160902 168161199 -85095384 - AluSg SINE Alu -14 296 1 286 280 28 28 chr2 168161550 168161657 -85094926 + HERVL40 LTR ERVL 4568 4674 -349 * 779 257 30 41 chr2 168161631 168161978 -85094605 + HERVL40 LTR ERVL 2783 5530 0 745 214 107 104 chr2 168162014 168162086 -85094497 + L1ME1 LINE L1 1261 1331 -5095 2041 104 0 0 chr2 168162086 168162346 -85094237 + AluSx SINE Alu 9 268 -44 967 52 13 26 chr2 168162347 168162501 -85094082 + (GAAA)n Simple_repeat Simple_repeat 1 152 0 745 214 107 104 chr2 168162501 168162862 -85093721 + L1ME1 LINE L1 1330 1842 -4584 * 3782 227 45 36 chr2 168162856 168163601 -85092982 + L1ME1 LINE L1 4303 5040 -1406 1623 204 31 14 chr2 168163601 168163959 -85092624 + MLT1A1 LTR MaLR 2 365 0 3782 227 45 36 chr2 168163959 168165211 -85091372 + L1ME1 LINE L1 5040 6314 -132 24 96 0 0 chr2 168165365 168165438 -85091145 + AT_rich Low_complexity Low_complexity 1 73 0 302 305 109 23 chr2 168166400 168166528 -85090055 - L2 LINE L2 0 3313 3175 201 338 0 15 chr2 168166613 168166681 -85089902 - MER5A DNA MER1_type -6 183 117 294 298 8 24 chr2 168166771 168166895 -85089688 - L2 LINE L2 -213 3059 2938 207 0 0 0 chr2 168166924 168166947 -85089636 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1940 129 0 0 chr2 168166950 168167229 -85089354 - AluSx SINE Alu -29 283 5 216 280 27 13 chr2 168167316 168167391 -85089192 - L3 LINE CR1 -576 1001 926 1053 266 87 46 chr2 168167689 168168359 -85088224 - L1MC4a LINE L1 -106 6015 5318 193 318 15 0 chr2 168169058 168169124 -85087459 - MIR SINE MIR -159 103 37 4490 199 30 11 chr2 168171484 168172802 -85083781 + L1MD2 LINE L1 4789 6130 -229 1594 168 3 37 chr2 168172806 168173104 -85083479 + AluJb SINE Alu 1 288 -24 268 24 24 24 chr2 168173127 168173169 -85083414 + (CA)n Simple_repeat Simple_repeat 1 42 0 12422 206 16 24 chr2 168173196 168175972 -85080611 - L1PA15 LINE L1 0 6165 3453 1648 183 11 7 chr2 168175972 168176280 -85080303 + AluSx SINE Alu 1 309 0 12422 206 16 24 chr2 168176280 168177400 -85079183 - L1PA15 LINE L1 -2712 3453 2325 21 36 0 0 chr2 168177503 168177531 -85079052 + AT_rich Low_complexity Low_complexity 1 28 0 1019 209 9 5 chr2 168177752 168177962 -85078621 - AluJo SINE Alu -11 301 91 257 252 50 122 chr2 168178583 168178722 -85077861 + MIR SINE MIR 5 133 -129 246 333 25 0 chr2 168178716 168178797 -85077786 - MIR SINE MIR -60 148 66 * 21 36 0 0 chr2 168178946 168178974 -85077609 + AT_rich Low_complexity Low_complexity 1 28 0 773 282 37 60 chr2 168179034 168179414 -85077169 - MLT1I LTR MaLR 0 409 39 281 346 143 8 chr2 168181106 168181239 -85075344 - MIR3 SINE MIR -27 181 31 189 292 108 0 chr2 168181892 168181957 -85074626 - MIR SINE MIR -74 188 117 383 0 21 0 chr2 168182222 168182269 -85074314 + (CA)n Simple_repeat Simple_repeat 2 49 0 210 319 14 14 chr2 168182667 168182736 -85073847 - MIR SINE MIR -105 157 89 24 0 0 0 chr2 168183719 168183743 -85072840 + AT_rich Low_complexity Low_complexity 1 24 0 759 160 8 0 chr2 168183758 168183877 -85072706 - FLAM_C SINE Alu -13 120 1 1585 125 0 4 chr2 168185147 168185379 -85071204 - AluSc SINE Alu -2 307 77 2507 46 0 0 chr2 168185455 168185760 -85070823 - AluY SINE Alu -1 310 6 261 157 0 20 chr2 168186545 168186596 -85069987 - L3 LINE CR1 -1 1576 1527 1534 220 15 0 chr2 168186686 168187013 -85069570 + MER58B DNA MER1_type 10 341 0 313 200 46 0 chr2 168187046 168187111 -85069472 + MLT1L LTR MaLR 139 206 -409 305 275 125 0 chr2 168187548 168187668 -85068915 - MIR SINE MIR -10 252 118 2380 55 0 3 chr2 168189786 168190079 -85066504 + AluY SINE Alu 1 292 -19 331 203 0 0 chr2 168192228 168192287 -85064296 - MADE1 DNA Mariner -21 59 1 722 237 121 20 chr2 168193524 168193722 -85062861 - MIR SINE MIR -42 220 3 686 136 18 0 chr2 168194085 168194195 -85062388 + Tigger4(Zombi) DNA MER2_type 13 124 -2607 1167 147 20 5 chr2 168194198 168194396 -85062187 + Tigger4(Zombi) DNA MER2_type 2531 2731 0 38 39 0 0 chr2 168194585 168194637 -85061946 + AT_rich Low_complexity Low_complexity 1 52 0 511 335 10 20 chr2 168196823 168197020 -85059563 - MIR SINE MIR -16 246 52 228 200 0 0 chr2 168198417 168198472 -85058111 + (CA)n Simple_repeat Simple_repeat 2 56 0 2251 234 75 38 chr2 168200450 168201052 -85055531 + MER72 LTR ERV1 62 685 -37 3935 229 121 11 chr2 168201240 168201361 -85055222 - L1M4b LINE L1 -5768 1091 985 805 152 0 36 chr2 168201361 168201499 -85055084 - FLAM_C SINE Alu 0 133 1 3935 229 121 11 chr2 168201499 168202351 -85054232 - L1M4b LINE L1 -5874 985 11 259 275 0 0 chr2 168202406 168202475 -85054108 + HAL1 LINE L1 2080 2148 -359 22 103 0 0 chr2 168202523 168202601 -85053982 + AT_rich Low_complexity Low_complexity 1 78 0 1974 127 3 3 chr2 168202949 168203248 -85053335 + AluSc SINE Alu 4 302 -7 257 289 34 27 chr2 168203250 168203399 -85053184 + HAL1 LINE L1 2246 2395 -112 25 75 0 0 chr2 168203794 168203847 -85052736 + AT_rich Low_complexity Low_complexity 1 53 0 700 151 104 137 chr2 168203868 168204038 -85052545 + LTR64 LTR ERVK 354 517 -41 1807 161 7 0 chr2 168204038 168204330 -85052253 - AluSx SINE Alu -18 294 1 700 151 104 137 chr2 168204330 168204371 -85052212 + LTR64 LTR ERVK 517 558 0 233 182 0 73 chr2 168204371 168204425 -85052158 - MLT1A2 LTR MaLR -324 50 1 10484 165 75 36 chr2 168205101 168206563 -85050020 + L1MA8 LINE L1 2768 4172 -2119 180 0 0 0 chr2 168206563 168206583 -85050000 + (GAAA)n Simple_repeat Simple_repeat 1 20 0 10484 165 75 36 chr2 168206583 168207706 -85048877 + L1MA8 LINE L1 4172 5478 -813 3754 126 7 7 chr2 168207706 168208303 -85048280 + L1MA3 LINE L1 5709 6305 0 10484 165 75 36 chr2 168208303 168208622 -85047961 + L1MA8 LINE L1 5478 5783 -508 1481 194 20 7 chr2 168208626 168208919 -85047664 + AluJo SINE Alu 1 297 -15 283 207 0 23 chr2 168208926 168209013 -85047570 + GA-rich Low_complexity Low_complexity 1 85 0 1025 102 17 6 chr2 168209013 168209189 -85047394 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 1332 155 4 17 chr2 168209206 168209445 -85047138 + L1MA8 LINE L1 5766 6001 -290 22 0 0 0 chr2 168210793 168210815 -85045768 + AT_rich Low_complexity Low_complexity 1 22 0 1438 119 10 0 chr2 168211170 168211416 -85045167 + AluSg/x SINE Alu 81 328 0 224 246 49 0 chr2 168211665 168211726 -85044857 + MIR SINE MIR 49 112 -150 42 20 0 0 chr2 168211742 168211791 -85044792 + AT_rich Low_complexity Low_complexity 1 49 0 220 353 164 25 chr2 168213537 168213659 -85042924 - MIR3 SINE MIR -51 157 19 28 48 0 0 chr2 168213737 168213779 -85042804 + AT_rich Low_complexity Low_complexity 1 42 0 7697 21 0 0 chr2 168213780 168214878 -85041705 - L1PA3 LINE L1 0 6155 5063 17925 43 2 6 chr2 168214878 168217155 -85039428 + L1P LINE L1 1267 3534 -2612 36 94 0 0 chr2 168217729 168217835 -85038748 + AT_rich Low_complexity Low_complexity 1 106 0 192 152 0 0 chr2 168218142 168218175 -85038408 + A-rich Low_complexity Low_complexity 2 34 0 695 249 24 103 chr2 168218303 168218484 -85038099 + MIR SINE MIR 4 161 -101 2595 32 0 9 chr2 168218484 168218800 -85037783 - L1PA4 LINE L1 -2 6153 5841 695 249 24 103 chr2 168218800 168218871 -85037712 + MIR SINE MIR 161 236 -26 258 285 152 30 chr2 168220186 168220351 -85036232 + L2 LINE L2 3099 3283 -30 518 333 57 10 chr2 168220518 168220710 -85035873 + MIR SINE MIR 26 226 -36 205 328 0 0 chr2 168221308 168221372 -85035211 - L2 LINE L2 0 3313 3250 2331 152 36 10 chr2 168222029 168222444 -85034139 - MER52A LTR ERV1 0 1755 1330 298 326 0 0 chr2 168223142 168223234 -85033349 + L1PA15-16 LINE L1 1473 1564 -5285 * 4697 228 22 49 chr2 168223219 168224694 -85031889 + L1PA15-16 LINE L1 1336 2861 -3988 569 252 13 7 chr2 168224769 168224920 -85031663 + L1PA15-16 LINE L1 2710 2861 -3988 2108 245 31 10 chr2 168224995 168225690 -85030893 + L1PA15-16 LINE L1 2710 3410 -3439 6761 240 74 25 chr2 168225693 168229864 -85026719 - L1 LINE L1 -1989 3981 1 588 280 30 0 chr2 168229872 168230040 -85026543 - Cheshire DNA MER1_type -1498 922 750 21 36 0 0 chr2 168230041 168230069 -85026514 + AT_rich Low_complexity Low_complexity 1 28 0 2428 153 52 27 chr2 168231413 168231859 -85024724 + MSTB2 LTR MaLR 1 457 0 1277 245 6 21 chr2 168232879 168232966 -85023617 + L1 LINE L1 4964 5051 -1095 2068 137 30 35 chr2 168232966 168233332 -85023251 + THE1B LTR MaLR 1 364 0 1277 245 6 21 chr2 168233332 168233583 -85023000 + L1 LINE L1 5051 5297 -849 3715 187 139 12 chr2 168233693 168234604 -85021979 - MER52A LTR ERV1 -728 1027 1 21 36 0 0 chr2 168234787 168234815 -85021768 + AT_rich Low_complexity Low_complexity 1 28 0 1978 165 0 0 chr2 168234863 168235172 -85021411 + AluSx SINE Alu 1 309 -3 618 223 19 32 chr2 168235432 168235589 -85020994 - L2 LINE L2 0 3313 3159 268 267 47 47 chr2 168235618 168235704 -85020879 + L1ME1 LINE L1 5493 5578 -588 639 136 0 34 chr2 168235711 168235829 -85020754 - AluJb SINE Alu 0 312 199 358 239 0 0 chr2 168235829 168235896 -85020687 + L1ME1 LINE L1 5580 5646 -520 188 130 0 58 chr2 168235898 168235967 -85020616 + (TCTA)n Simple_repeat Simple_repeat 3 67 0 1783 213 140 4 chr2 168235967 168236417 -85020166 + L1ME1 LINE L1 5650 6160 -6 1250 277 131 32 chr2 168236484 168237083 -85019500 - L2 LINE L2 -259 3054 2386 1275 242 27 70 chr2 168237134 168237493 -85019090 - MLT1C LTR MaLR 0 467 133 1657 205 186 131 chr2 168237493 168238458 -85018125 - LTR28 LTR ERV1 0 1020 2 1275 242 27 70 chr2 168238458 168238586 -85017997 - MLT1C LTR MaLR -334 133 1 21 0 0 0 chr2 168238644 168238665 -85017918 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 168239894 168239915 -85016668 + AT_rich Low_complexity Low_complexity 1 21 0 202 128 0 26 chr2 168241411 168241450 -85015133 - L2 LINE L2 -1 3312 3275 265 307 63 8 chr2 168241579 168241706 -85014877 - L2 LINE L2 -36 3277 3144 38 68 0 0 chr2 168242257 168242330 -85014253 + AT_rich Low_complexity Low_complexity 1 73 0 1914 35 0 0 chr2 168244076 168244307 -85012276 - L1PA4 LINE L1 -3 6152 5922 2402 28 0 0 chr2 168245036 168245320 -85011263 - L1PA4 LINE L1 -3 6152 5869 23 0 0 0 chr2 168245479 168245502 -85011081 + AT_rich Low_complexity Low_complexity 1 23 0 537 296 102 73 chr2 168245875 168246189 -85010394 + L2 LINE L2 2918 3240 -32 2311 22 0 7 chr2 168246548 168246822 -85009761 - AluY SINE Alu -1 310 39 235 366 21 0 chr2 168247533 168247626 -85008957 + L3 LINE CR1 1478 1572 -5 2074 126 60 0 chr2 168248139 168248457 -85008126 + MER1B DNA MER1_type 1 337 0 26 50 0 0 chr2 168248524 168248564 -85008019 + AT_rich Low_complexity Low_complexity 1 40 0 523 298 7 0 chr2 168252831 168252972 -85003611 + MIR SINE MIR 56 197 -65 275 306 59 12 chr2 168252980 168253065 -85003518 - L2 LINE L2 0 3272 3184 3454 238 91 15 chr2 168254022 168254964 -85001619 - L2 LINE L2 -1268 2046 1033 244 218 0 36 chr2 168255273 168255285 -85001298 + MER3 DNA MER1_type 38 47 -162 772 222 130 0 chr2 168255285 168255470 -85001113 - MER3 DNA MER1_type 0 209 1 251 288 45 4 chr2 168255483 168255571 -85001012 - MIR SINE MIR -92 116 19 1054 8 0 0 chr2 168256960 168257084 -84999499 - L1PA3 LINE L1 -1621 4525 4402 7457 36 1 0 chr2 168257084 168258736 -84997847 + L1PA3 LINE L1 4521 6172 0 27 49 0 0 chr2 168258968 168259009 -84997574 + AT_rich Low_complexity Low_complexity 1 41 0 23 0 0 0 chr2 168259098 168259121 -84997462 + AT_rich Low_complexity Low_complexity 1 23 0 811 202 0 0 chr2 168259433 168259562 -84997021 + MER2 DNA MER2_type 2 130 -215 416 215 0 0 chr2 168259564 168259643 -84996940 + Tigger5 DNA MER2_type 2 80 -2243 456 157 0 0 chr2 168259643 168259713 -84996870 - Tigger5 DNA MER2_type -5 2318 2249 314 141 183 28 chr2 168259710 168259781 -84996802 + Tigger5 DNA MER2_type 2242 2323 0 * 433 224 81 48 chr2 168259781 168259913 -84996670 + MER2 DNA MER2_type 130 273 -72 1662 163 20 30 chr2 168259913 168260213 -84996370 - AluJo SINE Alu -11 301 5 433 224 81 48 chr2 168260213 168260288 -84996295 + MER2 DNA MER2_type 273 344 -1 700 299 102 27 chr2 168260386 168260757 -84995826 + MLT1I LTR MaLR 1 399 -10 24 0 0 0 chr2 168261320 168261344 -84995239 + AT_rich Low_complexity Low_complexity 1 24 0 28987 97 10 9 chr2 168261835 168266949 -84989634 + L1PA7 LINE L1 1042 6152 -2 220 361 34 8 chr2 168267193 168267312 -84989271 - L2 LINE L2 -1410 1904 1783 729 136 24 131 chr2 168267699 168267760 -84988823 + Charlie1 DNA MER1_type 2550 2616 -145 1451 180 28 14 chr2 168267760 168268043 -84988540 - AluJb SINE Alu -22 290 4 729 136 24 131 chr2 168268043 168268187 -84988396 + Charlie1 DNA MER1_type 2616 2733 -28 2081 155 0 0 chr2 168268636 168268971 -84987612 - AluSx SINE Alu 0 312 1 1205 217 64 108 chr2 168269856 168270339 -84986244 + MLT1C LTR MaLR 6 467 0 201 176 0 0 chr2 168273845 168273879 -84982704 + T-rich Low_complexity Low_complexity 1 34 0 180 0 0 0 chr2 168274300 168274320 -84982263 + (A)n Simple_repeat Simple_repeat 1 20 0 186 296 0 0 chr2 168274797 168274851 -84981732 + L2 LINE L2 3256 3309 -4 21 57 0 0 chr2 168276013 168276048 -84980535 + AT_rich Low_complexity Low_complexity 1 35 0 23 86 0 0 chr2 168277028 168277086 -84979497 + AT_rich Low_complexity Low_complexity 1 58 0 1702 146 7 24 chr2 168277178 168277466 -84979117 - AluJb SINE Alu -25 287 5 22 0 0 0 chr2 168277483 168277505 -84979078 + AT_rich Low_complexity Low_complexity 1 22 0 299 337 103 0 chr2 168277968 168278109 -84978474 + MIR3 SINE MIR 42 198 -10 537 302 107 25 chr2 168278921 168279163 -84977420 - MIR SINE MIR 0 262 1 1188 144 0 0 chr2 168280310 168280484 -84976099 - AluSg/x SINE Alu -4 308 135 2285 101 0 0 chr2 168280853 168281160 -84975423 + AluSx SINE Alu 1 307 -5 39 22 0 0 chr2 168283695 168283741 -84972842 + AT_rich Low_complexity Low_complexity 1 46 0 21 36 0 0 chr2 168284061 168284089 -84972494 + AT_rich Low_complexity Low_complexity 1 28 0 21 71 0 0 chr2 168286374 168286416 -84970167 + AT_rich Low_complexity Low_complexity 1 42 0 25 75 0 0 chr2 168286992 168287045 -84969538 + AT_rich Low_complexity Low_complexity 1 53 0 21 0 0 0 chr2 168287165 168287186 -84969397 + AT_rich Low_complexity Low_complexity 1 21 0 339 78 0 0 chr2 168288041 168288092 -84968491 + (TA)n Simple_repeat Simple_repeat 2 52 0 284 130 101 14 chr2 168389767 168389836 -84866747 + L1MC3 LINE L1 7711 7785 0 206 300 0 50 chr2 168389964 168390064 -84866519 - L2 LINE L2 -211 3061 2967 1764 99 8 4 chr2 168390173 168390426 -84866157 - L1PA10 LINE L1 0 6168 5915 1016 159 44 6 chr2 168390622 168390804 -84865779 - MER20 DNA MER1_type 0 219 31 450 222 0 0 chr2 168391042 168391132 -84865451 - L2 LINE L2 0 3272 3183 16537 39 1 2 chr2 168392244 168394993 -84861590 - L1PA5 LINE L1 -3 6151 3409 296 314 131 21 chr2 168395029 168395265 -84861318 - L2 LINE L2 -403 2911 2650 864 163 102 152 chr2 168395372 168395715 -84860868 - L1MC4 LINE L1 -369 7673 7348 671 171 7 64 chr2 168395791 168395931 -84860652 - AluJo SINE Alu -58 254 123 1160 208 102 12 chr2 168396036 168396281 -84860302 + MER74A LTR ERVL 292 558 0 335 159 43 0 chr2 168396281 168396350 -84860233 - L1MC4 LINE L1 -692 7350 7279 239 236 18 0 chr2 168396350 168396405 -84860178 + MER112 DNA MER1_type 9 64 -196 324 0 0 0 chr2 168396405 168396441 -84860142 + (TG)n Simple_repeat Simple_repeat 2 37 0 276 30 0 0 chr2 168396550 168396583 -84860000 + (CA)n Simple_repeat Simple_repeat 2 34 0 292 323 56 0 chr2 168396583 168396744 -84859839 + MER112 DNA MER1_type 89 258 -2 223 301 70 8 chr2 168396767 168396974 -84859609 - L2 LINE L2 -624 2690 2416 214 297 16 0 chr2 168397347 168397411 -84859172 + CT-rich Low_complexity Low_complexity 2 66 0 531 0 0 0 chr2 168397610 168397669 -84858914 + (CA)n Simple_repeat Simple_repeat 1 59 0 334 326 14 14 chr2 168399079 168399223 -84857360 + CT-rich Low_complexity Low_complexity 4 147 0 262 343 12 6 chr2 168399392 168399564 -84857019 + (TG)n Simple_repeat Simple_repeat 2 174 0 338 342 0 0 chr2 168400716 168400833 -84855750 + GA-rich Low_complexity Low_complexity 4 120 0 790 58 16 0 chr2 168400849 168400970 -84855613 + (GA)n Simple_repeat Simple_repeat 2 124 0 21 0 0 0 chr2 168401834 168401855 -84854728 + AT_rich Low_complexity Low_complexity 1 21 0 813 228 10 16 chr2 168401887 168402080 -84854503 - MIR SINE MIR -30 232 41 2221 114 0 16 chr2 168402128 168402435 -84854148 - AluSx SINE Alu -10 302 1 573 292 34 14 chr2 168402945 168403154 -84853429 + MIR SINE MIR 21 233 -29 24 53 0 0 chr2 168403172 168403210 -84853373 + AT_rich Low_complexity Low_complexity 1 38 0 204 40 0 0 chr2 168403353 168403378 -84853205 + (T)n Simple_repeat Simple_repeat 1 25 0 717 195 0 0 chr2 168403448 168403566 -84853017 - FLAM_C SINE Alu -15 118 1 199 289 29 67 chr2 168403850 168403954 -84852629 - MIR3 SINE MIR -5 203 104 41 21 0 0 chr2 168404477 168404525 -84852058 + AT_rich Low_complexity Low_complexity 1 48 0 2145 122 0 0 chr2 168404647 168405019 -84851564 + AluSg SINE Alu 1 310 0 313 282 118 46 chr2 168405625 168405820 -84850763 + MIR SINE MIR 13 221 -41 575 306 84 64 chr2 168405993 168406084 -84850499 - MLT1K LTR MaLR -2 586 498 2065 135 0 7 chr2 168406084 168406380 -84850203 + AluJo SINE Alu 1 294 -18 575 306 84 64 chr2 168406380 168406405 -84850178 - MLT1K LTR MaLR -90 498 475 361 123 37 49 chr2 168406405 168406486 -84850097 - MER116 DNA Mariner 0 80 1 575 306 84 64 chr2 168406486 168406822 -84849761 - MLT1K LTR MaLR -113 475 124 261 178 0 0 chr2 168408253 168408298 -84848285 - Alu SINE Alu -4 298 254 1566 186 45 0 chr2 168408299 168408568 -84848015 - AluJb SINE Alu -31 281 1 430 244 15 23 chr2 168408735 168408866 -84847717 - MLT1K LTR MaLR -10 578 449 3008 56 0 51 chr2 168409228 168409641 -84846942 - L1PA8 LINE L1 -4 6168 5777 389 64 3 3 chr2 168409641 168409698 -84846885 + L1PA8 LINE L1 5735 5791 -387 186 217 100 0 chr2 168409753 168409813 -84846770 - MIR3 SINE MIR -48 160 95 2412 243 136 118 chr2 168410238 168411530 -84845053 + L2 LINE L2 893 2229 -1085 2131 108 34 3 chr2 168411530 168411826 -84844757 - AluSx SINE Alu -7 305 1 2412 243 136 118 chr2 168411826 168412362 -84844221 + L2 LINE L2 2229 2754 -560 870 258 186 0 chr2 168412371 168412662 -84843921 - LTR16A LTR ERVL -5 445 101 968 255 135 35 chr2 168412741 168413258 -84843325 + L2 LINE L2 2750 3313 0 449 282 144 0 chr2 168414066 168414254 -84842329 - MIR SINE MIR 0 262 48 216 0 0 0 chr2 168414431 168414455 -84842128 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 764 151 7 58 chr2 168415579 168415718 -84840865 - FLAM_A SINE Alu -1 132 1 261 0 0 0 chr2 168416389 168416418 -84840165 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 494 229 30 15 chr2 168416648 168416779 -84839804 - L1MD2 LINE L1 -212 6147 6015 2263 58 0 0 chr2 168417880 168418157 -84838426 + L1PA7 LINE L1 5878 6154 0 283 256 183 30 chr2 168418613 168418777 -84837806 + MIR SINE MIR 64 252 -10 182 294 26 137 chr2 168419523 168419676 -84836907 - L2 LINE L2 -133 3139 3004 21 0 0 0 chr2 168420064 168420085 -84836498 + AT_rich Low_complexity Low_complexity 1 21 0 595 217 57 34 chr2 168420177 168420353 -84836230 + MER20B DNA MER1_type 29 211 -8 288 273 13 0 chr2 168420470 168420547 -84836036 - MIR SINE MIR -72 190 113 35 0 0 0 chr2 168420927 168420962 -84835621 + AT_rich Low_complexity Low_complexity 1 35 0 237 254 17 0 chr2 168421339 168421398 -84835185 + L2 LINE L2 3205 3264 -8 1042 289 78 34 chr2 168421503 168421915 -84834668 - MLT1J LTR MaLR -54 457 28 667 315 39 8 chr2 168421944 168422198 -84834385 + L3 LINE CR1 1049 1310 -267 485 244 172 6 chr2 168423241 168423421 -84833162 - MIR SINE MIR -3 259 50 998 144 33 3 chr2 168423805 168424142 -84832441 + CT-rich Low_complexity Low_complexity 1 348 0 1800 161 7 16 chr2 168424147 168424452 -84832131 - AluJo SINE Alu -10 302 1 285 29 0 0 chr2 168425706 168425740 -84830843 + (TG)n Simple_repeat Simple_repeat 1 34 0 2001 128 0 7 chr2 168425740 168426021 -84830562 - AluSx SINE Alu -33 279 1 2092 144 0 3 chr2 168426246 168426545 -84830038 - AluSx SINE Alu -14 298 1 610 235 8 15 chr2 168426611 168426743 -84829840 - FLAM_C SINE Alu -2 131 1 217 246 0 0 chr2 168427067 168427124 -84829459 + (TAAA)n Simple_repeat Simple_repeat 2 58 0 270 263 0 0 chr2 168427560 168427617 -84828966 - L2 LINE L2 -62 3210 3154 26 30 0 0 chr2 168427729 168427762 -84828821 + AT_rich Low_complexity Low_complexity 1 33 0 24 32 0 0 chr2 168428040 168428071 -84828512 + AT_rich Low_complexity Low_complexity 1 31 0 500 99 0 12 chr2 168428739 168428820 -84827763 + (TTCC)n Simple_repeat Simple_repeat 3 82 0 229 311 0 0 chr2 168429512 168429586 -84826997 + L1MC4 LINE L1 6652 6725 -1317 270 211 40 13 chr2 168429832 168429908 -84826675 + CT-rich Low_complexity Low_complexity 1 78 0 21 0 0 0 chr2 168430958 168430979 -84825604 + AT_rich Low_complexity Low_complexity 1 21 0 497 261 60 27 chr2 168431492 168431676 -84824907 + MER20B DNA MER1_type 2 191 -592 2349 112 0 32 chr2 168432109 168432456 -84824127 - MER1B DNA MER1_type 0 337 2 854 129 8 0 chr2 168432892 168433016 -84823567 - AluSq/x SINE Alu -188 125 1 528 265 138 0 chr2 168433216 168433405 -84823178 + MIR SINE MIR 14 228 -34 490 293 65 14 chr2 168433461 168433676 -84822907 + MIR SINE MIR 23 248 -14 306 123 0 0 chr2 168433776 168433833 -84822750 + (T)n Simple_repeat Simple_repeat 1 57 0 1835 91 34 85 chr2 168433833 168435120 -84821463 - SVA Other Other -551 902 433 5853 65 21 52 chr2 168435197 168436037 -84820546 - SVA Other Other -520 866 53 643 36 0 45 chr2 168436037 168436149 -84820434 + (GGGAGA)n Simple_repeat Simple_repeat 3 109 0 201 74 0 0 chr2 168437190 168437217 -84819366 + (T)n Simple_repeat Simple_repeat 1 27 0 914 249 21 9 chr2 168437981 168438214 -84818369 + MIR SINE MIR 6 241 -21 25 0 0 0 chr2 168440593 168440618 -84815965 + AT_rich Low_complexity Low_complexity 1 25 0 304 263 42 11 chr2 168440728 168440823 -84815760 - L1ME4a LINE L1 -73 6048 5951 730 268 100 19 chr2 168440862 168441340 -84815243 - L1ME4a LINE L1 -249 5872 5356 286 293 164 0 chr2 168442064 168442180 -84814403 - MIR SINE MIR -56 206 72 427 286 182 13 chr2 168442424 168442578 -84814005 - MER5A DNA MER1_type 0 189 10 206 271 0 0 chr2 168442773 168442821 -84813762 + (TAA)n Simple_repeat Simple_repeat 1 48 0 300 268 138 8 chr2 168442834 168442957 -84813626 - MIR SINE MIR -52 210 72 209 56 0 28 chr2 168444162 168444198 -84812385 + (TTTTA)n Simple_repeat Simple_repeat 2 36 0 1805 151 4 0 chr2 168444200 168444471 -84812112 - AluJo SINE Alu -30 282 11 753 235 55 0 chr2 168444612 168444812 -84811771 - MLT1L LTR MaLR 0 615 405 616 334 113 19 chr2 168445244 168445711 -84810872 + L2 LINE L2 1879 2389 -925 285 304 24 120 chr2 168445954 168446121 -84810462 + L2 LINE L2 2424 2561 -753 1844 127 6 64 chr2 168446121 168446435 -84810148 - AluJb SINE Alu -16 296 1 285 304 24 120 chr2 168446435 168446517 -84810066 + L2 LINE L2 2561 2649 -665 498 330 54 68 chr2 168446780 168447116 -84809467 + L2 LINE L2 2942 3272 0 1324 191 6 85 chr2 168447839 168448158 -84808425 - AluJo SINE Alu -16 296 3 730 73 0 0 chr2 168448445 168448541 -84808042 + L1PA5 LINE L1 1 96 -6050 35284 57 5 2 chr2 168448541 168454053 -84802530 + L1PA5 LINE L1 623 6154 0 430 211 33 46 chr2 168454376 168454528 -84802055 - L1ME4a LINE L1 -1 6120 5971 22 35 0 0 chr2 168454840 168454869 -84801714 + AT_rich Low_complexity Low_complexity 1 29 0 2347 98 3 0 chr2 168455718 168456025 -84800558 - AluSp SINE Alu -5 308 1 31 44 0 0 chr2 168456089 168456134 -84800449 + AT_rich Low_complexity Low_complexity 1 45 0 1885 152 0 60 chr2 168456196 168456565 -84800018 - MER7A DNA MER2_type -1 345 1 215 283 0 0 chr2 168457097 168457150 -84799433 + L2 LINE L2 3182 3234 -38 2263 76 0 0 chr2 168457191 168457530 -84799053 - L1PA8 LINE L1 -3 6169 5675 25 0 0 0 chr2 168458348 168458373 -84798210 + AT_rich Low_complexity Low_complexity 1 25 0 193 241 74 19 chr2 168458917 168458971 -84797612 - MIR SINE MIR -188 74 18 1828 215 49 67 chr2 168459084 168459652 -84796931 - L1MC5 LINE L1 -54 7907 7353 997 174 123 0 chr2 168459652 168459847 -84796736 - MER20 DNA MER1_type 0 219 1 1828 215 49 67 chr2 168459847 168460012 -84796571 - L1MC5 LINE L1 -608 7353 7187 22 35 0 0 chr2 168460729 168460758 -84795825 + AT_rich Low_complexity Low_complexity 1 29 0 315 251 66 163 chr2 168461616 168461935 -84794648 + L2 LINE L2 1641 1928 -1386 1120 21 21 0 chr2 168463084 168463226 -84793357 + (TTTC)n Simple_repeat Simple_repeat 4 148 0 972 249 25 8 chr2 168463804 168464041 -84792542 + MIR SINE MIR 12 252 -10 360 0 0 0 chr2 168464043 168464083 -84792500 + (ATG)n Simple_repeat Simple_repeat 2 41 0 207 0 0 0 chr2 168464281 168464304 -84792279 + (TG)n Simple_repeat Simple_repeat 2 24 0 23 68 0 0 chr2 168465936 168465980 -84790603 + AT_rich Low_complexity Low_complexity 1 44 0 214 308 66 22 chr2 168466604 168466695 -84789888 - L2 LINE L2 -37 3276 3182 188 289 109 31 chr2 168466986 168467114 -84789469 - MIR3 SINE MIR -70 138 1 427 314 127 21 chr2 168467223 168467506 -84789077 + L2 LINE L2 2996 3308 -5 222 118 0 0 chr2 168467525 168467559 -84789024 + (T)n Simple_repeat Simple_repeat 1 34 0 1091 193 19 5 chr2 168467700 168467907 -84788676 - MER63A DNA MER1_type 0 210 1 218 31 0 31 chr2 168468168 168468200 -84788383 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 2161 133 3 0 chr2 168468575 168468883 -84787700 - AluSx SINE Alu -3 309 1 1440 124 0 62 chr2 168469418 168469660 -84786923 - AluJb SINE Alu -4 308 82 351 172 65 32 chr2 168471507 168471600 -84784983 - MLT1H LTR MaLR 0 549 454 335 145 53 26 chr2 168471757 168471833 -84784750 - MLT1H LTR MaLR -393 156 79 261 0 0 0 chr2 168471983 168472012 -84784571 + (A)n Simple_repeat Simple_repeat 1 29 0 332 261 60 45 chr2 168472432 168472566 -84784017 - L1ME4a LINE L1 -14 6107 5972 1230 224 0 26 chr2 168472695 168472963 -84783620 - AluJo SINE Alu -5 307 47 69 0 0 0 chr2 168474379 168474448 -84782135 + AT_rich Low_complexity Low_complexity 1 69 0 207 0 0 0 chr2 168474610 168474633 -84781950 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1378 157 102 47 chr2 168476976 168477250 -84779333 - AluJo SINE Alu -23 289 1 2226 127 0 6 chr2 168477710 168478054 -84778529 + AluSx SINE Alu 1 342 0 313 280 0 10 chr2 168478220 168478320 -84778263 - LTR33 LTR ERVL -396 125 27 993 158 34 38 chr2 168478734 168478943 -84777640 + MER3 DNA MER1_type 2 209 0 457 285 41 12 chr2 168480423 168480505 -84776078 - L1MC4a LINE L1 -1892 5916 5838 2143 96 7 0 chr2 168480505 168480838 -84775745 - AluY SINE Alu 0 335 1 2257 112 0 0 chr2 168480841 168481137 -84775446 - AluSq SINE Alu -17 296 1 457 285 41 12 chr2 168481137 168481291 -84775292 - L1MC4a LINE L1 -1971 5837 5668 380 296 52 47 chr2 168481476 168481648 -84774935 + MIR SINE MIR 20 192 -70 1795 178 7 3 chr2 168483781 168484074 -84772509 - AluJo SINE Alu -18 294 1 2092 161 3 0 chr2 168485060 168485364 -84771219 - AluSx SINE Alu -7 305 1 256 235 284 10 chr2 168487473 168487575 -84769008 - L2 LINE L2 -4 3309 3180 251 218 51 26 chr2 168487568 168487646 -84768937 - MIR3 SINE MIR -41 167 88 * 737 187 0 8 chr2 168487841 168487975 -84768608 - FLAM_C SINE Alu 0 133 1 331 288 134 42 chr2 168488197 168488555 -84768028 + MARNA DNA Mariner 21 411 -175 403 327 85 0 chr2 168488661 168488826 -84767757 + MIR SINE MIR 29 207 -55 399 41 0 0 chr2 168490621 168490670 -84765913 + (TG)n Simple_repeat Simple_repeat 2 50 0 959 69 8 0 chr2 168490751 168490882 -84765701 - L1PA5 LINE L1 -1 6153 6022 27 62 0 0 chr2 168491032 168491080 -84765503 + AT_rich Low_complexity Low_complexity 1 48 0 219 69 0 0 chr2 168491385 168491414 -84765169 + (TG)n Simple_repeat Simple_repeat 2 30 0 324 0 0 0 chr2 168491483 168491519 -84765064 + (TTTA)n Simple_repeat Simple_repeat 4 39 0 21085 58 2 1 chr2 168491521 168495010 -84761573 - L1PA5 LINE L1 -12 6142 2650 1603 183 4 8 chr2 168495125 168495393 -84761190 + AluJo SINE Alu 38 304 -8 764 263 39 16 chr2 168495601 168495856 -84760727 + MIR SINE MIR 2 262 0 1389 253 156 19 chr2 168495930 168496734 -84759849 - HAL1 LINE L1 -130 2377 1464 294 325 106 14 chr2 168496767 168497050 -84759533 - HAL1 LINE L1 -1557 950 642 632 323 114 39 chr2 168497168 168497713 -84758870 - HAL1 LINE L1 -1812 695 110 23 0 0 0 chr2 168497995 168498018 -84758565 + AT_rich Low_complexity Low_complexity 1 23 0 15827 26 1 0 chr2 168498018 168500663 -84755920 - L1PA3 LINE L1 0 6155 3509 632 171 178 0 chr2 168500798 168500944 -84755639 + FRAM SINE Alu 1 166 -10 325 325 157 33 chr2 168500978 168501489 -84755094 + L2 LINE L2 1584 2157 -1157 269 357 31 0 chr2 168501651 168501780 -84754803 + L2 LINE L2 2244 2376 -938 565 294 31 0 chr2 168502126 168502286 -84754297 + MIR SINE MIR 98 262 0 189 0 0 0 chr2 168502910 168502931 -84753652 + (T)n Simple_repeat Simple_repeat 1 21 0 427 315 46 20 chr2 168503903 168504100 -84752483 - MIR SINE MIR -43 219 18 294 123 0 0 chr2 168504410 168504467 -84752116 + (T)n Simple_repeat Simple_repeat 1 57 0 21 0 0 0 chr2 168504679 168504700 -84751883 + AT_rich Low_complexity Low_complexity 1 21 0 30 59 0 0 chr2 168505894 168505945 -84750638 + AT_rich Low_complexity Low_complexity 1 51 0 447 339 106 17 chr2 168506960 168507140 -84749443 + MER91A DNA MER1_type 1 196 0 41031 30 21 2 chr2 168507620 168513653 -84742930 - L1HS LINE L1 0 6155 2 199 339 15 0 chr2 168514299 168514364 -84742219 - MIR3 SINE MIR -1 207 142 723 153 93 0 chr2 168515883 168516001 -84740582 + FLAM_C SINE Alu 3 131 -12 667 12 0 0 chr2 168516001 168516083 -84740500 + L1PA3 LINE L1 6074 6155 0 347 117 0 67 chr2 168516188 168516248 -84740335 - AluY SINE Alu -126 175 120 644 223 8 0 chr2 168516276 168516406 -84740177 + AluJb SINE Alu 171 301 -11 448 275 44 55 chr2 168516940 168517178 -84739405 + MIR SINE MIR 9 250 -12 257 229 0 0 chr2 168518165 168518213 -84738370 + MIR3 SINE MIR 150 197 -11 1688 62 0 0 chr2 168518931 168519140 -84737443 + L1PA7 LINE L1 5946 6154 0 187 186 70 0 chr2 168522887 168522930 -84733653 + MIR SINE MIR 161 206 -56 756 279 82 19 chr2 168523253 168523572 -84733011 - MLT1J LTR MaLR -172 339 1 2309 108 3 0 chr2 168526738 168527033 -84729550 + AluSx SINE Alu 1 296 -16 2065 144 0 10 chr2 168527065 168527370 -84729213 + AluJb SINE Alu 1 302 -10 5077 46 36 0 chr2 168527511 168528147 -84728436 + L1PA8 LINE L1 5514 6172 0 255 259 43 69 chr2 168528316 168528432 -84728151 + MIR SINE MIR 30 142 -66 720 322 176 2 chr2 168529446 168529850 -84726733 + L2 LINE L2 2840 3313 0 1914 176 0 0 chr2 168530953 168531265 -84725318 - AluJb SINE Alu 0 312 1 341 330 121 13 chr2 168533064 168533288 -84723295 + L2 LINE L2 3019 3266 -6 514 285 15 15 chr2 168534996 168535133 -84721450 - L2 LINE L2 0 3272 3136 229 378 13 74 chr2 168536089 168536319 -84720264 - L2 LINE L2 0 3272 3057 2202 105 0 14 chr2 168537144 168537469 -84719114 - AluSx SINE Alu 0 312 1 470 227 0 0 chr2 168538182 168538279 -84718304 + Tigger7 DNA MER2_type 2391 2487 0 182 282 18 118 chr2 168538481 168538591 -84717992 - MIR3 SINE MIR -6 202 104 1712 130 43 34 chr2 168539425 168539747 -84716836 + MER44D DNA MER2_type 7 601 -8 404 189 27 0 chr2 168539873 168539947 -84716636 + MIR SINE MIR 70 145 -117 210 71 0 0 chr2 168540568 168540596 -84715987 + (TG)n Simple_repeat Simple_repeat 1 28 0 479 280 87 7 chr2 168540870 168541020 -84715563 + MIR SINE MIR 89 250 -12 263 297 173 27 chr2 168541040 168541225 -84715358 - MIR SINE MIR -14 248 37 273 288 154 43 chr2 168542254 168542446 -84714137 - L2 LINE L2 -358 2956 2718 1527 76 141 24 chr2 168542446 168542695 -84713888 - L1PA16 LINE L1 -1 6165 5888 273 288 154 43 chr2 168542695 168542801 -84713782 - L2 LINE L2 -596 2718 2625 1441 241 47 16 chr2 168543256 168543683 -84712900 - MLT1J1 LTR MaLR 0 446 7 435 149 51 29 chr2 168546398 168546573 -84710010 + (TA)n Simple_repeat Simple_repeat 2 180 0 237 167 0 0 chr2 168546644 168546698 -84709885 + (TATG)n Simple_repeat Simple_repeat 3 56 0 213 284 0 54 chr2 168547725 168547799 -84708784 + L2 LINE L2 3198 3267 -5 490 256 176 20 chr2 168548845 168549044 -84707539 + L2 LINE L2 3077 3306 -7 2305 88 3 6 chr2 168549346 168549675 -84706908 - L1PB1 LINE L1 0 6151 5824 815 214 28 6 chr2 168550452 168550634 -84705949 - MER5A DNA MER1_type -1 188 3 1498 248 120 80 chr2 168551260 168552499 -84704084 - L1MC4 LINE L1 -8 8034 6746 2184 113 0 16 chr2 168553520 168553831 -84702752 + AluSx SINE Alu 1 306 -6 1374 161 18 0 chr2 168553978 168554195 -84702388 + MER58A DNA MER1_type 1 221 -3 201 246 29 29 chr2 168557678 168557747 -84698836 - MIR SINE MIR -14 248 180 2126 117 13 0 chr2 168558500 168558798 -84697785 - AluSx SINE Alu -10 302 1 446 278 170 5 chr2 168559693 168559887 -84696696 + MIR SINE MIR 12 237 -25 782 252 115 85 chr2 168560886 168561642 -84694941 - L1MC5 LINE L1 -261 7700 6969 201 39 0 0 chr2 168561642 168561668 -84694915 + (TTTAG)n Simple_repeat Simple_repeat 5 30 0 782 252 115 85 chr2 168561668 168562011 -84694572 - L1MC5 LINE L1 -992 6969 6638 2499 61 0 3 chr2 168562011 168562308 -84694275 - AluY SINE Alu -15 296 1 782 252 115 85 chr2 168562308 168563082 -84693501 - L1MC5 LINE L1 -1323 6638 5762 1850 163 7 0 chr2 168563856 168564145 -84692438 - AluJo SINE Alu -21 291 1 502 254 232 0 chr2 168566009 168566190 -84690393 + MER58A DNA MER1_type 2 224 0 247 268 48 30 chr2 168566203 168566371 -84690212 - L1ME LINE L1 -303 5818 5648 390 301 120 14 chr2 168566970 168567246 -84689337 - L1MC4 LINE L1 -1899 5909 5605 2313 68 34 0 chr2 168567268 168567560 -84689023 + AluSc SINE Alu 1 302 -7 502 239 60 33 chr2 168567828 168568012 -84688571 - L2 LINE L2 -50 3263 3075 1884 166 6 19 chr2 168568816 168569130 -84687453 - AluJb SINE Alu 0 312 3 496 269 63 23 chr2 168569705 168569880 -84686703 + MIR SINE MIR 5 186 -76 783 176 47 12 chr2 168570498 168570668 -84685915 - ORSL DNA AcHobo -2 273 98 486 151 23 0 chr2 168570739 168570825 -84685758 - ORSL DNA AcHobo -187 88 1 720 278 122 36 chr2 168570872 168571264 -84685319 - Charlie8 DNA MER1_type -1990 427 2 284 272 0 25 chr2 168572343 168572424 -84684159 + CT-rich Low_complexity Low_complexity 2 80 0 691 61 50 10 chr2 168575106 168575205 -84681378 + L1PA11 LINE L1 6072 6174 0 365 336 29 7 chr2 168575512 168575652 -84680931 - MIR3 SINE MIR -8 200 58 498 263 68 0 chr2 168575828 168575961 -84680622 - MER63A DNA MER1_type -19 191 50 21 0 0 0 chr2 168576954 168576975 -84679608 + AT_rich Low_complexity Low_complexity 1 21 0 296 363 0 32 chr2 168577071 168577195 -84679388 - L2 LINE L2 0 3272 3153 1594 172 11 4 chr2 168577216 168577530 -84679053 + AluJb SINE Alu 1 316 0 253 270 87 52 chr2 168578749 168578864 -84677719 + MIR SINE MIR 144 262 0 22 56 0 0 chr2 168579311 168579347 -84677236 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr2 168581586 168581608 -84674975 + AT_rich Low_complexity Low_complexity 1 22 0 285 337 0 0 chr2 168581715 168581801 -84674782 - MER117 DNA MER1_type -11 186 101 2277 96 3 0 chr2 168582545 168582838 -84673745 - AluSp SINE Alu -19 294 1 1607 191 11 0 chr2 168582970 168583242 -84673341 + AluSx SINE Alu 1 275 -37 384 22 0 0 chr2 168583247 168583292 -84673291 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 23 0 0 0 chr2 168583491 168583514 -84673069 + AT_rich Low_complexity Low_complexity 1 23 0 1608 159 4 4 chr2 168587467 168587718 -84668865 + AluJb SINE Alu 1 251 -61 357 282 62 77 chr2 168588642 168588837 -84667746 - MIR SINE MIR -70 192 1 678 226 0 0 chr2 168591217 168591350 -84665233 + FLAM_A SINE Alu 1 133 0 186 103 0 0 chr2 168591356 168591385 -84665198 + (GA)n Simple_repeat Simple_repeat 2 30 0 330 152 61 0 chr2 168593001 168593067 -84663516 - LTR5 LTR ERVK 0 969 900 401 160 67 0 chr2 168593074 168593149 -84663434 - LTR5 LTR ERVK -889 80 1 252 0 0 0 chr2 168594230 168594258 -84662325 + (TA)n Simple_repeat Simple_repeat 2 29 0 337 308 33 66 chr2 168594276 168594458 -84662125 + MER5B DNA MER1_type 3 178 0 391 270 0 11 chr2 168594538 168594627 -84661956 + MER5A DNA MER1_type 2 89 -100 195 349 38 47 chr2 168594687 168594793 -84661790 - MER5A DNA MER1_type -50 139 35 * 346 231 0 0 chr2 168594745 168594810 -84661773 + MER5A DNA MER1_type 119 183 -6 448 250 33 0 chr2 168595966 168596058 -84660525 + L2 LINE L2 3134 3228 -44 237 276 16 65 chr2 168596995 168597118 -84659465 - L1MC5 LINE L1 -819 7142 7026 346 221 4 31 chr2 168597500 168597605 -84658978 - MLT1I LTR MaLR -1 449 316 500 225 25 24 chr2 168597640 168597813 -84658770 - MLT1J2 LTR MaLR -172 237 67 453 231 8 43 chr2 168598176 168598293 -84658290 - MER94 DNA DNA -20 114 2 292 283 33 11 chr2 168599271 168599363 -84657220 - MLT1J2 LTR MaLR -14 436 343 455 239 169 11 chr2 168599386 168599570 -84657013 - MLT1J1 LTR MaLR -168 278 66 451 338 101 9 chr2 168599938 168600157 -84656426 - MIR SINE MIR -4 258 20 1262 57 0 19 chr2 168600223 168600381 -84656202 + L1PA6 LINE L1 5995 6149 -5 1709 184 10 0 chr2 168600503 168600821 -84655762 + AluJb SINE Alu 1 312 0 276 275 211 7 chr2 168600953 168601095 -84655488 - MIR SINE MIR -50 212 42 288 255 102 0 chr2 168601107 168601205 -84655378 + MIR SINE MIR 39 146 -62 341 147 0 15 chr2 168601767 168601835 -84654748 + (TTC)n Simple_repeat Simple_repeat 3 69 0 654 168 40 62 chr2 168601883 168602074 -84654509 - L1MA9 LINE L1 -34 6265 6078 580 279 0 6 chr2 168602558 168602723 -84653860 + L1M4 LINE L1 3298 3461 -2685 363 272 87 40 chr2 168603435 168603711 -84652872 - L1ME4a LINE L1 -57 6064 5776 491 201 94 20 chr2 168603712 168603861 -84652722 + MER104 DNA Tc2 8 167 -13 428 267 98 84 chr2 168603869 168604165 -84652418 - L1ME4a LINE L1 -336 5785 5486 333 0 0 0 chr2 168604178 168604215 -84652368 + (TG)n Simple_repeat Simple_repeat 2 38 0 444 136 19 19 chr2 168604318 168604421 -84652162 + (TCTA)n Simple_repeat Simple_repeat 4 106 0 213 227 15 30 chr2 168605090 168605156 -84651427 + L2 LINE L2 3208 3272 0 232 300 45 18 chr2 168605638 168605748 -84650835 + MIR SINE MIR 150 262 0 367 348 36 76 chr2 168608124 168608426 -84648157 + L2 LINE L2 2982 3271 -1 340 299 24 72 chr2 168608540 168608707 -84647876 + MIR SINE MIR 58 216 -46 26 64 0 0 chr2 168611766 168611813 -84644770 + AT_rich Low_complexity Low_complexity 1 47 0 2132 118 7 7 chr2 168612416 168612722 -84643861 - AluSq SINE Alu -7 306 1 333 304 7 29 chr2 168613027 168613165 -84643418 - MIR SINE MIR -8 254 120 31 44 0 0 chr2 168613598 168613643 -84642940 + AT_rich Low_complexity Low_complexity 1 45 0 819 87 10 0 chr2 168613650 168613754 -84642829 - FRAM SINE Alu -31 145 41 1339 147 65 54 chr2 168613802 168614081 -84642502 - L1MB8 LINE L1 -21 6157 5876 331 296 57 45 chr2 168614246 168614422 -84642161 + Charlie8 DNA MER1_type 4 181 -2236 1660 153 31 8 chr2 168614661 168614922 -84641661 + AluJo SINE Alu 2 268 -44 487 202 37 9 chr2 168614923 168615032 -84641551 + L2 LINE L2 3201 3312 -1 23 0 0 0 chr2 168615558 168615581 -84641002 + AT_rich Low_complexity Low_complexity 1 23 0 315 252 92 25 chr2 168617178 168617297 -84639286 - MIR SINE MIR -65 197 71 255 61 0 0 chr2 168617876 168617909 -84638674 + (TGGGGG)n Simple_repeat Simple_repeat 3 35 0 890 225 39 0 chr2 168617938 168618120 -84638463 - MER5A DNA MER1_type 0 189 1 547 197 142 16 chr2 168618131 168618290 -84638293 + MER5A DNA MER1_type 4 185 -4 192 259 56 0 chr2 168618406 168618460 -84638123 - MIR3 SINE MIR -1 207 151 474 204 51 66 chr2 168618513 168618603 -84637980 + MER5B DNA MER1_type 28 117 -61 2438 73 0 13 chr2 168618603 168618916 -84637667 - AluY SINE Alu -2 309 1 474 204 51 66 chr2 168618916 168618962 -84637621 + MER5B DNA MER1_type 117 162 -16 186 331 147 22 chr2 168619159 168619295 -84637288 - L2 LINE L2 -46 3226 3074 1006 222 83 23 chr2 168620774 168621076 -84635507 - L2 LINE L2 -19 3294 2975 240 237 68 4 chr2 168621985 168622122 -84634461 - MER5A DNA MER1_type 0 189 4 446 303 101 22 chr2 168624096 168624324 -84632259 + MIR SINE MIR 9 254 -8 315 85 0 0 chr2 168624728 168624775 -84631808 + (TC)n Simple_repeat Simple_repeat 2 48 0 203 321 0 0 chr2 168625193 168625249 -84631334 + L2 LINE L2 3217 3272 0 3114 58 2 12 chr2 168625470 168625884 -84630699 - LTR7 LTR ERV1 -40 410 1 2451 81 47 24 chr2 168625884 168626265 -84630318 - HERVH LTR ERV1 0 7713 7324 1511 127 0 0 chr2 168626265 168626485 -84630098 - HERVH LTR ERV1 -1894 5819 5600 7918 124 13 5 chr2 168626486 168628197 -84628386 - HERVH LTR ERV1 -1805 5286 3492 941 140 7 0 chr2 168628187 168628337 -84628246 - HERVH LTR ERV1 -4423 3290 3140 * 1003 159 0 0 chr2 168628331 168628494 -84628089 - HERVH LTR ERV1 -4726 2987 2825 24 0 0 0 chr2 168629829 168629853 -84626730 + AT_rich Low_complexity Low_complexity 1 24 0 504 256 47 24 chr2 168630490 168630688 -84625895 - MER20B DNA MER1_type -5 214 2 363 89 0 0 chr2 168630987 168631043 -84625540 + (CA)n Simple_repeat Simple_repeat 1 56 0 2200 131 0 0 chr2 168631691 168631988 -84624595 + AluSg SINE Alu 1 297 -13 508 176 124 26 chr2 168632549 168632702 -84623881 + MIR SINE MIR 95 262 0 919 158 0 0 chr2 168634726 168634859 -84621724 - FLAM_A SINE Alu 0 133 1 273 119 0 0 chr2 168634982 168635024 -84621559 + (TGAA)n Simple_repeat Simple_repeat 3 44 0 222 222 0 0 chr2 168635585 168635634 -84620949 + MIR SINE MIR 104 153 -55 15447 195 35 20 chr2 168636114 168641351 -84615232 - L1 LINE L1 -857 5991 676 989 172 0 64 chr2 168641333 168641467 -84615116 - L1 LINE L1 -6656 193 75 * 2575 67 0 10 chr2 168641467 168641781 -84614802 - AluY SINE Alu 0 311 1 989 172 0 64 chr2 168641781 168641850 -84614733 - L1 LINE L1 -6774 75 3 299 287 148 9 chr2 168643237 168643345 -84613238 - L2 LINE L2 -2 3311 3189 * 426 319 31 21 chr2 168643337 168643528 -84613055 - MIR SINE MIR -56 206 14 26 30 0 0 chr2 168644114 168644147 -84612436 + AT_rich Low_complexity Low_complexity 1 33 0 803 146 42 114 chr2 168644163 168644359 -84612224 + MER51C LTR ERV1 471 640 0 524 341 66 12 chr2 168647355 168647613 -84608970 + LTR16A LTR ERVL 83 354 -96 184 278 83 42 chr2 168648011 168648083 -84608500 - L3 LINE CR1 -4 1573 1499 198 302 110 55 chr2 168648219 168648474 -84608109 - L2 LINE L2 -9 3304 3036 677 84 21 0 chr2 168648520 168648615 -84607968 + L1PA13 LINE L1 6064 6160 -3 338 238 105 19 chr2 168649088 168649193 -84607390 + MIR SINE MIR 65 178 -84 1448 218 51 60 chr2 168649515 168649969 -84606614 - MER39 LTR ERV1 -1 706 257 321 216 137 39 chr2 168649953 168650008 -84606575 - MER34 LTR ERV1 -430 112 64 * 1713 188 0 3 chr2 168650008 168650301 -84606282 - AluJo SINE Alu -16 296 5 321 216 137 39 chr2 168650301 168650347 -84606236 - MER34 LTR ERV1 -478 64 1 338 316 0 34 chr2 168652605 168652722 -84603861 + MIR SINE MIR 16 128 -80 448 254 8 24 chr2 168653640 168653766 -84602817 + MIR SINE MIR 81 204 -58 738 191 32 0 chr2 168654538 168654664 -84601919 + FLAM_A SINE Alu 1 130 -3 21 0 0 0 chr2 168654735 168654756 -84601827 + AT_rich Low_complexity Low_complexity 1 21 0 267 250 200 43 chr2 168654937 168655077 -84601506 + MIR SINE MIR 59 220 -42 581 260 117 20 chr2 168655860 168656056 -84600527 - MIR SINE MIR -38 224 10 1869 156 13 73 chr2 168656204 168656602 -84599981 - MLT1B LTR MaLR -16 374 1 2644 119 10 83 chr2 168657226 168657706 -84598877 + MER65A LTR ERV1 1 445 0 596 273 176 70 chr2 168658467 168659321 -84597262 - L3 LINE CR1 -33 1544 601 292 368 23 0 chr2 168659834 168659967 -84596616 + MIR SINE MIR 126 261 -1 229 294 131 39 chr2 168660041 168660194 -84596389 + L3 LINE CR1 1374 1540 -37 189 0 0 0 chr2 168660227 168660248 -84596335 + (T)n Simple_repeat Simple_repeat 1 21 0 221 178 22 0 chr2 168660586 168660631 -84595952 + GA-rich Low_complexity Low_complexity 3 48 0 1267 107 0 0 chr2 168660908 168661067 -84595516 - AluSq SINE Alu -154 159 1 531 287 29 0 chr2 168661081 168661217 -84595366 + MIR SINE MIR 1 140 -122 201 133 0 0 chr2 168661720 168661750 -84594833 + (GAAAA)n Simple_repeat Simple_repeat 5 34 0 269 344 128 0 chr2 168662196 168662321 -84594262 + L3b LINE CR1 1425 1565 -18 1446 170 62 38 chr2 168662552 168662841 -84593742 - AluJo SINE Alu -16 296 1 400 307 118 68 chr2 168662904 168663639 -84592944 - L2 LINE L2 -5 3308 2472 1597 155 44 0 chr2 168664966 168665244 -84591339 - AluJb SINE Alu 0 309 21 939 209 17 0 chr2 168666916 168667093 -84589490 - MER5A DNA MER1_type 0 189 10 2459 145 43 19 chr2 168667452 168667595 -84588988 + L1M2 LINE L1 4896 5034 -1257 918 132 0 22 chr2 168667595 168667731 -84588852 + FLAM_C SINE Alu 1 133 0 2459 145 43 19 chr2 168667731 168668310 -84588273 + L1M2 LINE L1 5034 5624 -667 288 77 0 0 chr2 168668906 168668945 -84587638 + (TG)n Simple_repeat Simple_repeat 2 40 0 646 270 146 21 chr2 168669268 168669501 -84587082 + MIR SINE MIR 1 262 0 247 325 209 0 chr2 168669945 168670151 -84586432 + MIR SINE MIR 4 252 -10 338 235 160 59 chr2 168670625 168670744 -84585839 - MIR SINE MIR -59 149 19 684 0 0 0 chr2 168670976 168671052 -84585531 + (TTTTA)n Simple_repeat Simple_repeat 5 80 0 2234 184 45 5 chr2 168671149 168671551 -84585032 - MER47B DNA MER2_type 0 418 1 554 187 193 0 chr2 168672378 168672521 -84584062 + MER5A DNA MER1_type 4 178 -11 398 290 85 30 chr2 168673021 168673221 -84583362 + LTR33 LTR ERVL 307 517 -4 234 316 0 13 chr2 168673265 168673341 -84583242 + L1MDa LINE L1 21 95 -6445 544 232 27 0 chr2 168673554 168673666 -84582917 + MIR SINE MIR 35 149 -113 18056 129 25 17 chr2 168673670 168676425 -84580158 + L1MA3 LINE L1 1 2775 -4790 6920 130 22 27 chr2 168676424 168678581 -84578002 + L1MA3 LINE L1 5590 7724 0 * 2106 59 11 11 chr2 168679238 168679509 -84577074 - L1PA4 LINE L1 -5 6150 5880 2154 110 0 23 chr2 168682219 168682234 -84574349 - AluSq SINE Alu -12 301 287 1065 145 0 0 chr2 168682234 168682413 -84574170 + (TC)n Simple_repeat Simple_repeat 2 180 0 2154 110 0 23 chr2 168682413 168682705 -84573878 - AluSq SINE Alu -26 287 1 2039 97 6 82 chr2 168683130 168683461 -84573122 + AluSg SINE Alu 1 306 -4 189 250 167 42 chr2 168684056 168684152 -84572431 - MIR SINE MIR -70 192 85 1269 209 28 6 chr2 168684602 168684973 -84571610 + Charlie4 DNA MER1_type 18 1891 -70 2330 127 63 3 chr2 168685231 168685594 -84570989 + Tigger2 DNA MER2_type 2334 2718 0 4782 209 84 40 chr2 168685603 168687049 -84569534 + L1MC4 LINE L1 6467 8042 0 354 319 96 6 chr2 168687901 168688058 -84568525 + MIR SINE MIR 2 172 -90 1259 170 19 0 chr2 168688178 168688390 -84568193 - MER20 DNA MER1_type -3 216 1 288 74 13 19 chr2 168688624 168688680 -84567903 + MSTA LTR MaLR 1 55 -309 300 296 150 49 chr2 168688836 168689062 -84567521 - MIR SINE MIR -1 261 13 195 129 0 0 chr2 168689152 168689183 -84567400 + (GGAA)n Simple_repeat Simple_repeat 3 33 0 2572 62 0 0 chr2 168691185 168691494 -84565089 - AluY SINE Alu -2 309 1 187 274 48 32 chr2 168691750 168691812 -84564771 - L2 LINE L2 -64 3208 3146 1636 130 16 8 chr2 168693685 168693962 -84562621 + AluSx SINE Alu 35 313 0 423 305 118 22 chr2 168696287 168696619 -84559964 + L1MC/D LINE L1 5500 5862 -304 261 244 26 0 chr2 168696868 168696946 -84559637 + L1MC5 LINE L1 7297 7376 -585 1065 190 28 12 chr2 168697050 168697297 -84559286 + L1PB4 LINE L1 5903 6153 -3 655 234 63 36 chr2 168697411 168697744 -84558839 + L1MC5 LINE L1 7584 7925 -36 2364 61 7 0 chr2 168697764 168698058 -84558525 + AluY SINE Alu 1 296 -15 1262 220 83 35 chr2 168698955 168699377 -84557206 + MER39 LTR ERV1 266 707 0 339 239 177 18 chr2 168699941 168700054 -84556529 - MIR SINE MIR -34 228 98 6528 78 21 0 chr2 168700238 168701190 -84555393 - L1PA13 LINE L1 -1 6162 5210 * 7683 25 1 0 chr2 168701189 168702123 -84554460 + L1PA4 LINE L1 5218 6152 -3 6344 161 4 1 chr2 168702129 168703287 -84553296 - L1PA13 LINE L1 -917 5229 4068 20297 134 12 7 chr2 168703311 168706397 -84550186 - L1PA10 LINE L1 -6 6162 3041 2231 102 3 3 chr2 168706397 168706701 -84549882 - AluY SINE Alu -7 304 1 20297 134 12 7 chr2 168706701 168708043 -84548540 - L1PA10 LINE L1 -3127 3041 1708 2123 152 3 0 chr2 168708095 168708404 -84548179 + AluSx SINE Alu 1 310 -2 22 56 0 0 chr2 168708405 168708441 -84548142 + AT_rich Low_complexity Low_complexity 1 36 0 368 320 59 18 chr2 168708449 168708671 -84547912 - L1ME4a LINE L1 -255 5866 5636 311 313 141 6 chr2 168708760 168708923 -84547660 + MLT1H LTR MaLR 97 281 -268 2002 159 0 3 chr2 168709042 168709350 -84547233 - AluSx SINE Alu -5 307 1 355 281 78 8 chr2 168709386 168709514 -84547069 + MER39 LTR ERV1 1 137 -570 * 948 179 193 18 chr2 168709482 168709762 -84546821 + MER39 LTR ERV1 257 585 -122 337 195 1 0 chr2 168709837 168709913 -84546670 + MLT1H LTR MaLR 482 549 0 1490 165 45 88 chr2 168710902 168711301 -84545282 - MLT1B LTR MaLR -6 384 3 3558 179 24 28 chr2 168711511 168712270 -84544313 - L1MB5 LINE L1 -10 6662 5907 1975 184 15 11 chr2 168712282 168712738 -84543845 - L1MB5 LINE L1 -872 5772 5315 * 16545 112 32 7 chr2 168712730 168715364 -84541219 - L1M1 LINE L1 -4046 3519 819 3460 137 8 27 chr2 168715361 168715960 -84540623 - L1M1 LINE L1 -6963 602 15 * 4565 216 51 23 chr2 168715961 168716938 -84539645 - L1MB5 LINE L1 -1310 5334 4386 2752 74 6 0 chr2 168716938 168717289 -84539294 - THE1A LTR MaLR 0 355 3 11592 101 4 6 chr2 168717291 168718873 -84537710 - THE1A-int LTR MaLR 0 1580 1 2703 91 6 0 chr2 168718873 168719226 -84537357 - THE1A LTR MaLR 0 355 1 4565 216 51 23 chr2 168719226 168719525 -84537058 - L1MB5 LINE L1 -2257 4387 4018 3483 234 54 57 chr2 168719529 168720106 -84536477 - L1MB5 LINE L1 -4662 1984 1407 768 204 0 0 chr2 168720106 168720238 -84536345 - FLAM_C SINE Alu -1 132 1 3483 234 54 57 chr2 168720238 168721616 -84534967 - L1MB5 LINE L1 -5239 1407 1 823 350 53 31 chr2 168721812 168722264 -84534319 + L2 LINE L2 2012 2473 -841 2169 120 0 3 chr2 168722450 168722751 -84533832 + AluJb SINE Alu 10 309 -3 1517 116 0 8 chr2 168723255 168723497 -84533086 + L1PA13 LINE L1 5924 6163 0 201 210 0 65 chr2 168723865 168723927 -84532656 + T-rich Low_complexity Low_complexity 4 61 0 946 280 80 49 chr2 168724100 168724586 -84531997 - MLT1L LTR MaLR -73 542 42 286 273 187 50 chr2 168724651 168724836 -84531747 + MIR SINE MIR 4 211 -51 296 260 67 47 chr2 168726608 168726758 -84529825 - L1ME4a LINE L1 -16 6105 5953 520 196 0 0 chr2 168726890 168726982 -84529601 - MIR SINE MIR -100 162 71 1249 246 47 39 chr2 168727017 168727378 -84529205 + MLT1J1 LTR MaLR 8 371 -75 306 297 20 20 chr2 168727392 168727493 -84529090 - MIR SINE MIR -160 102 2 578 219 62 23 chr2 168728443 168728571 -84528012 - MER5A DNA MER1_type -56 133 1 * 661 209 104 149 chr2 168728571 168729092 -84527491 + L2 LINE L2 2782 3277 -36 278 274 24 43 chr2 168729285 168729400 -84527183 + MIR3 SINE MIR 87 203 -5 21 57 0 0 chr2 168729772 168729807 -84526776 + AT_rich Low_complexity Low_complexity 1 35 0 678 313 25 16 chr2 168729978 168730221 -84526362 + MIR SINE MIR 18 262 0 2846 13 3 0 chr2 168732237 168732552 -84524031 + AluYb8 SINE Alu 1 316 -2 189 107 0 0 chr2 168732989 168733017 -84523566 + (A)n Simple_repeat Simple_repeat 1 28 0 447 288 64 72 chr2 168733547 168734033 -84522550 + L2 LINE L2 2687 3181 -91 479 198 166 57 chr2 168734133 168734290 -84522293 - MER58B DNA MER1_type 0 341 168 1078 254 80 4 chr2 168736065 168736510 -84520073 + MER90 LTR ERV1 35 614 0 24 32 0 0 chr2 168737141 168737172 -84519411 + AT_rich Low_complexity Low_complexity 1 31 0 1625 124 10 112 chr2 168737443 168737846 -84518737 + L1MC3 LINE L1 7401 7762 -23 180 0 0 0 chr2 168738063 168738083 -84518500 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 1332 86 30 5 chr2 168738083 168738281 -84518302 - L1PA10 LINE L1 -21 6147 5945 277 288 87 19 chr2 168738596 168738838 -84517745 - L1MC4a LINE L1 -303 5887 5732 731 299 15 0 chr2 168738838 168739042 -84517541 + MIR SINE MIR 52 258 -4 387 285 26 2 chr2 168739042 168739242 -84517341 - L1MC4a LINE L1 -505 5685 5529 21 36 0 0 chr2 168739306 168739334 -84517249 + AT_rich Low_complexity Low_complexity 1 28 0 259 308 110 23 chr2 168739423 168740040 -84516543 - L1MC4a LINE L1 -2324 3891 3221 240 256 91 0 chr2 168740106 168740227 -84516356 - L1MC4a LINE L1 -3126 3089 2958 23 33 0 0 chr2 168740520 168740550 -84516033 + AT_rich Low_complexity Low_complexity 1 30 0 21 89 0 0 chr2 168740621 168740677 -84515906 + AT_rich Low_complexity Low_complexity 1 56 0 434 285 92 50 chr2 168740758 168741014 -84515569 - L1MEd LINE L1 -3673 2542 2298 2118 141 0 0 chr2 168741014 168741311 -84515272 + AluSx SINE Alu 1 297 -15 434 285 92 50 chr2 168741311 168741355 -84515228 - L1MEd LINE L1 -3917 2298 2257 1818 145 36 36 chr2 168741355 168741720 -84514863 - L1MB7 LINE L1 0 6184 5820 434 285 92 50 chr2 168741720 168741841 -84514742 - L1MEd LINE L1 -3958 2257 2145 29 60 0 0 chr2 168742024 168742074 -84514509 + AT_rich Low_complexity Low_complexity 1 50 0 346 283 115 56 chr2 168742271 168742593 -84513990 - HAL1 LINE L1 -754 1822 1482 1063 207 4 65 chr2 168742601 168742847 -84513736 - MER8 DNA MER2_type -3 236 6 313 260 11 25 chr2 168742897 168743039 -84513544 - L1MEd LINE L1 -1155 1421 1188 257 362 9 17 chr2 168744693 168744809 -84511774 - MIR SINE MIR -120 142 28 396 0 0 0 chr2 168745253 168745297 -84511286 + (TG)n Simple_repeat Simple_repeat 2 45 0 1011 326 34 36 chr2 168746357 168746918 -84509665 - L2 LINE L2 0 3313 2750 280 338 118 23 chr2 168746957 168747389 -84509194 - L2 LINE L2 -2106 1208 736 377 340 25 19 chr2 168747532 168747694 -84508889 - MIR3 SINE MIR -32 176 14 2036 110 24 0 chr2 168749508 168749799 -84506784 - AluSq SINE Alu 0 313 16 188 312 28 128 chr2 168750219 168750312 -84506271 - L2 LINE L2 0 3272 3196 1371 210 58 11 chr2 168750312 168750588 -84505995 + AluJo SINE Alu 1 289 -23 188 312 28 128 chr2 168750588 168750635 -84505948 - L2 LINE L2 -76 3196 3146 532 317 24 6 chr2 168752064 168752231 -84504352 - MLT1F LTR MaLR -371 171 2 763 144 0 8 chr2 168752397 168752529 -84504054 - L1MB8 LINE L1 0 6178 6048 4657 31 4 0 chr2 168752539 168753086 -84503497 - L1PA4 LINE L1 -2 6153 5605 2858 161 58 14 chr2 168753087 168753639 -84502944 - L1MB8 LINE L1 -115 6063 5488 1426 219 104 40 chr2 168753660 168754130 -84502453 + MLT1D LTR MaLR 6 505 0 1185 195 16 65 chr2 168754130 168754570 -84502013 - L1MB8 LINE L1 -713 5471 5059 483 218 73 0 chr2 168754559 168754683 -84501900 - L1M4 LINE L1 -955 5191 5059 * 1261 162 32 5 chr2 168754686 168754902 -84501681 + MSTA LTR MaLR 207 428 0 5514 223 70 5 chr2 168754912 168755689 -84500894 - L1M4 LINE L1 -1139 5007 4282 312 27 0 0 chr2 168755689 168755726 -84500857 + (TTTTA)n Simple_repeat Simple_repeat 4 40 0 5514 223 70 5 chr2 168755726 168756421 -84500162 - L1M4 LINE L1 -1864 4282 3439 1022 106 6 0 chr2 168756428 168756588 -84499995 - L1MA8 LINE L1 -3 6288 6128 8361 106 32 16 chr2 168756626 168758436 -84498147 + L1PB1 LINE L1 634 2616 -4247 2682 96 3 16 chr2 168758438 168758824 -84497759 + L1PB1 LINE L1 6126 6506 -361 26 74 0 0 chr2 168758843 168758897 -84497686 + AT_rich Low_complexity Low_complexity 1 54 0 2671 75 11 19 chr2 168758916 168758928 -84497655 + L1PB1 LINE L1 6498 6509 -358 240 35 0 0 chr2 168758928 168758957 -84497626 + (CA)n Simple_repeat Simple_repeat 1 29 0 2671 75 11 19 chr2 168758957 168759315 -84497268 + L1PB1 LINE L1 6509 6865 -2 29 60 0 0 chr2 168759315 168759365 -84497218 + AT_rich Low_complexity Low_complexity 1 50 0 3763 142 55 0 chr2 168759365 168760005 -84496578 - L1MA8 LINE L1 -152 6139 5465 1377 184 27 12 chr2 168760003 168760340 -84496243 - L1M4 LINE L1 -3650 2496 2155 * 1687 247 73 44 chr2 168760336 168760852 -84495731 + L1MD1 LINE L1 94 712 -5828 2812 156 52 20 chr2 168760855 168761451 -84495132 + L1MD1 LINE L1 1917 2531 -4009 3769 195 66 19 chr2 168761464 168762918 -84493665 + L1MD1 LINE L1 5009 6529 -107 229 218 26 77 chr2 168762968 168763046 -84493537 + A-rich Low_complexity Low_complexity 5 78 0 1899 118 34 12 chr2 168763686 168764008 -84492575 - L1MA6 LINE L1 -6 6294 5966 196 53 53 35 chr2 168765410 168765467 -84491116 + (TA)n Simple_repeat Simple_repeat 2 59 0 216 0 0 0 chr2 168766277 168766301 -84490282 + (T)n Simple_repeat Simple_repeat 1 24 0 236 320 72 10 chr2 168766494 168766591 -84489992 - MIR SINE MIR -62 146 44 29 0 0 0 chr2 168766989 168767018 -84489565 + AT_rich Low_complexity Low_complexity 1 29 0 258 324 83 0 chr2 168767351 168767459 -84489124 + MIR SINE MIR 17 133 -75 23 33 0 0 chr2 168767555 168767585 -84488998 + AT_rich Low_complexity Low_complexity 1 30 0 889 219 109 13 chr2 168767657 168767895 -84488688 - MIR SINE MIR 0 262 2 639 278 109 17 chr2 168768784 168769014 -84487569 - MIR SINE MIR -11 251 1 441 320 69 11 chr2 168769542 168769717 -84486866 + MIR SINE MIR 60 244 -18 1113 173 0 69 chr2 168770210 168770441 -84486142 + AluJo SINE Alu 85 299 -13 22 0 0 0 chr2 168770639 168770661 -84485922 + AT_rich Low_complexity Low_complexity 1 22 0 4673 149 14 11 chr2 168771819 168772625 -84483958 + L1MA8 LINE L1 3302 4109 -2037 4109 128 31 54 chr2 168772629 168774059 -84482524 + L1MA8 LINE L1 4657 6048 -243 1198 111 43 34 chr2 168774172 168774407 -84482176 + L1MA8 LINE L1 6051 6287 -4 1902 167 0 7 chr2 168774546 168774840 -84481743 + AluJo SINE Alu 1 292 -20 192 269 0 0 chr2 168774945 168774997 -84481586 - L2 LINE L2 0 3313 3262 5721 116 26 45 chr2 168776323 168777459 -84479124 - L1PB1 LINE L1 0 6151 5027 471 254 34 115 chr2 168777831 168778040 -84478543 - L2 LINE L2 -2 3311 3120 195 326 169 11 chr2 168778185 168778363 -84478220 + L2 LINE L2 3014 3219 -94 229 188 21 0 chr2 168779272 168779320 -84477263 - L2 LINE L2 0 3313 3265 308 43 22 0 chr2 168779463 168779509 -84477074 + (TC)n Simple_repeat Simple_repeat 1 47 0 1139 202 23 5 chr2 168780344 168780562 -84476021 + MER58A DNA MER1_type 1 222 -2 505 286 15 8 chr2 168780752 168780885 -84475698 - MIR SINE MIR -40 222 89 266 270 276 13 chr2 168781601 168781753 -84474830 + MIR SINE MIR 34 225 -37 1058 53 0 0 chr2 168782574 168782705 -84473878 - AluSp/q SINE Alu 0 313 183 349 316 76 68 chr2 168782712 168783107 -84473476 - L2 LINE L2 -65 3248 2851 1895 158 0 3 chr2 168783257 168783561 -84473022 + AluJb SINE Alu 1 303 -9 2054 133 33 0 chr2 168783841 168784143 -84472440 + AluJo SINE Alu 1 312 0 1932 125 70 25 chr2 168784321 168784680 -84471903 + THE1C LTR MaLR 1 375 0 266 309 93 22 chr2 168784941 168785080 -84471503 + MIR SINE MIR 76 224 -38 244 179 28 47 chr2 168785099 168785205 -84471378 + (TATAA)n Simple_repeat Simple_repeat 5 108 0 36 53 0 0 chr2 168785220 168785277 -84471306 + AT_rich Low_complexity Low_complexity 1 57 0 294 53 0 79 chr2 168786454 168786530 -84470053 + (TA)n Simple_repeat Simple_repeat 2 71 0 25 0 0 0 chr2 168786593 168786618 -84469965 + AT_rich Low_complexity Low_complexity 1 25 0 564 206 10 0 chr2 168786621 168787361 -84469222 + (TA)n Simple_repeat Simple_repeat 1 747 0 247 130 22 0 chr2 168787516 168787562 -84469021 + MADE1 DNA Mariner 7 53 -27 261 303 101 17 chr2 168787590 168787709 -84468874 - L2 LINE L2 0 3272 3144 420 250 0 0 chr2 168788788 168788868 -84467715 + Tigger3(Golem) DNA MER2_type 1 80 -2949 636 159 28 0 chr2 168788972 168789079 -84467504 + Tigger3(Golem) DNA MER2_type 2919 3028 -1 584 298 126 5 chr2 168789253 168789468 -84467115 - MIR SINE MIR -2 260 20 1032 253 8 12 chr2 168790986 168791227 -84465356 - MIR SINE MIR -10 252 13 777 294 48 16 chr2 168791282 168791530 -84465053 + MIR SINE MIR 5 260 -2 197 287 94 72 chr2 168796177 168796400 -84460183 - L2 LINE L2 -695 2619 2392 451 323 37 43 chr2 168796663 168796963 -84459620 - MLT1K LTR MaLR -20 568 271 230 302 78 47 chr2 168797270 168797399 -84459184 + L2 LINE L2 3181 3313 0 280 282 20 19 chr2 168800496 168800601 -84455982 - MIR SINE MIR -91 117 11 233 312 104 0 chr2 168801166 168801243 -84455340 - L2 LINE L2 0 3272 3188 241 327 96 26 chr2 168802035 168802191 -84454392 + MER5B DNA MER1_type 9 175 -3 395 191 38 19 chr2 168802198 168802303 -84454280 - LTR40b LTR ERVL -2 460 354 225 0 0 0 chr2 168802317 168802342 -84454241 + (T)n Simple_repeat Simple_repeat 1 25 0 1351 247 21 35 chr2 168802364 168802740 -84453843 - LTR40b LTR ERVL -87 375 5 297 261 15 0 chr2 168802744 168802809 -84453774 - MIR3 SINE MIR -45 163 98 707 273 128 0 chr2 168804909 168805096 -84451487 - MIR SINE MIR -31 231 21 1275 335 23 5 chr2 168805155 168805585 -84450998 + L1PB4 LINE L1 373 810 -6399 805 149 75 0 chr2 168805733 168805935 -84450648 + L1PB4 LINE L1 1845 2089 -5120 1610 150 48 48 chr2 168805940 168806273 -84450310 + THE1C LTR MaLR 5 337 -38 2406 110 5 19 chr2 168806273 168806646 -84449937 + MSTA-int LTR MaLR 1213 1580 0 1645 168 204 11 chr2 168806646 168807003 -84449580 + MSTA LTR MaLR 1 426 -2 4299 211 16 28 chr2 168807004 168808143 -84448440 + L1PB4 LINE L1 2090 3214 -3995 1885 148 3 22 chr2 168808143 168808495 -84448088 - MER4A LTR ERV1 0 664 261 554 128 53 11 chr2 168808495 168808589 -84447994 - MER4A LTR ERV1 -566 98 1 13636 190 38 6 chr2 168808589 168811980 -84444603 + L1PB4 LINE L1 3211 6704 -514 330 105 0 35 chr2 168811981 168812038 -84444545 - MLT2A2 LTR ERVL 0 453 399 201 147 0 0 chr2 168812041 168812075 -84444508 + (CATATA)n Simple_repeat Simple_repeat 2 35 0 261 0 0 0 chr2 168812107 168812136 -84444447 + (TG)n Simple_repeat Simple_repeat 2 30 0 2473 106 50 24 chr2 168812154 168812566 -84444017 - MLT2A1 LTR ERVL -34 481 1 3007 137 43 0 chr2 168812566 168813056 -84443527 + L1PB4 LINE L1 6701 7211 -7 193 319 0 0 chr2 168813194 168813241 -84443342 - MIR SINE MIR -134 74 28 243 323 113 15 chr2 168813641 168813774 -84442809 - L2 LINE L2 -1 3312 3167 296 288 39 102 chr2 168813779 168813984 -84442599 - L2 LINE L2 0 3272 3081 399 294 44 50 chr2 168814152 168814312 -84442271 + MIR3 SINE MIR 39 197 -11 388 280 79 58 chr2 168814903 168815157 -84441426 + MIR SINE MIR 4 256 -6 26 50 0 0 chr2 168815672 168815712 -84440871 + AT_rich Low_complexity Low_complexity 1 40 0 184 244 22 0 chr2 168815956 168816001 -84440582 + L2 LINE L2 3265 3310 -3 573 169 7 27 chr2 168816595 168816743 -84439840 + CT-rich Low_complexity Low_complexity 2 146 0 1704 114 20 0 chr2 168816975 168817230 -84439353 - L1MC1 LINE L1 -2 6331 6072 33 56 0 0 chr2 168818355 168818409 -84438174 + AT_rich Low_complexity Low_complexity 1 54 0 308 308 30 23 chr2 168818663 168818796 -84437787 - L1ME4a LINE L1 -195 5926 5793 422 317 48 63 chr2 168819202 168819510 -84437073 - L1ME4a LINE L1 -1081 5065 4765 1629 94 19 23 chr2 168819510 168819775 -84436808 - L1MA1 LINE L1 0 6302 6039 422 317 48 63 chr2 168819775 168819924 -84436659 - L1ME4a LINE L1 -1381 4765 4615 12365 123 88 50 chr2 168820258 168822565 -84434018 - Tigger1 DNA MER2_type 0 2418 25 21 0 0 0 chr2 168822769 168822790 -84433793 + AT_rich Low_complexity Low_complexity 1 21 0 2124 128 0 0 chr2 168923851 168924139 -84332444 + AluSx SINE Alu 3 290 -22 242 308 71 55 chr2 168924174 168924356 -84332227 + L2 LINE L2 3123 3307 -6 591 281 52 26 chr2 168924860 168925052 -84331531 - MIR3 SINE MIR -7 201 5 24 77 0 0 chr2 168928539 168928591 -84327992 + AT_rich Low_complexity Low_complexity 1 52 0 693 257 42 46 chr2 168930420 168930661 -84325922 + MER41D LTR ERV1 318 557 0 459 0 0 0 chr2 168931179 168931230 -84325353 + (TA)n Simple_repeat Simple_repeat 2 52 0 232 264 69 0 chr2 168931243 168931315 -84325268 - MIR SINE MIR -85 177 101 185 128 0 26 chr2 168931323 168931362 -84325221 + (TA)n Simple_repeat Simple_repeat 1 38 0 335 225 56 100 chr2 168931992 168932152 -84324431 - MIR SINE MIR -77 185 33 1840 124 14 14 chr2 168932724 168933034 -84323549 - AluSx SINE Alu 0 310 1 2001 122 61 0 chr2 168934705 168934984 -84321599 + AluSx SINE Alu 1 296 -16 2410 97 0 0 chr2 168934991 168935301 -84321282 - AluY SINE Alu -1 310 1 1643 129 109 22 chr2 168940088 168940399 -84316184 + MER44D DNA MER2_type 2 609 0 263 290 75 11 chr2 168940858 168940951 -84315632 + L2 LINE L2 3169 3267 -46 436 261 48 100 chr2 168941138 168941368 -84315215 - MIR SINE MIR -1 261 44 668 286 110 13 chr2 168943314 168943541 -84313042 - MIR SINE MIR -12 250 2 425 262 85 7 chr2 168944626 168944767 -84311816 + MIR SINE MIR 99 250 -12 323 328 86 0 chr2 168945537 168945653 -84310930 - MER91A DNA MER1_type 0 196 71 326 156 16 0 chr2 168946121 168946185 -84310398 + GA-rich Low_complexity Low_complexity 1 65 0 24 0 0 0 chr2 168947012 168947036 -84309547 + AT_rich Low_complexity Low_complexity 1 24 0 273 57 0 0 chr2 168948068 168948103 -84308480 + (CA)n Simple_repeat Simple_repeat 1 35 0 21 57 0 0 chr2 168950155 168950190 -84306393 + AT_rich Low_complexity Low_complexity 1 35 0 25 31 0 0 chr2 168950868 168950900 -84305683 + AT_rich Low_complexity Low_complexity 1 32 0 216 216 0 0 chr2 168952462 168952513 -84304070 + CT-rich Low_complexity Low_complexity 3 53 0 357 24 0 0 chr2 168952996 168953038 -84303545 + (TG)n Simple_repeat Simple_repeat 1 42 0 246 267 10 40 chr2 168953648 168953749 -84302834 - L1ME3A LINE L1 -5 6165 6068 461 185 99 26 chr2 168953853 168954004 -84302579 - L1ME3A LINE L1 -223 5947 5786 203 292 239 18 chr2 168954477 168954590 -84301993 + MIR SINE MIR 36 173 -89 22 35 0 0 chr2 168956609 168956638 -84299945 + AT_rich Low_complexity Low_complexity 1 29 0 260 337 40 0 chr2 168957045 168957146 -84299437 + MIR SINE MIR 110 214 -48 349 287 180 13 chr2 168959356 168959506 -84297077 + MER5A DNA MER1_type 15 189 0 186 259 103 0 chr2 168960895 168960953 -84295630 + MIR SINE MIR 81 144 -64 596 281 108 0 chr2 168961329 168961514 -84295069 + MIR SINE MIR 45 249 -13 364 266 70 14 chr2 168961690 168961833 -84294750 + MIR SINE MIR 7 157 -105 21 57 0 0 chr2 168962769 168962804 -84293779 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr2 168963786 168963815 -84292768 + AT_rich Low_complexity Low_complexity 1 29 0 203 240 40 27 chr2 168964328 168964403 -84292180 + MIR SINE MIR 132 207 -55 253 274 86 91 chr2 168966500 168966697 -84289886 + L2 LINE L2 2326 2521 -793 255 312 80 40 chr2 168967366 168967491 -84289092 + L2 LINE L2 3143 3272 0 180 263 63 63 chr2 168968147 168968242 -84288341 - MIR3 SINE MIR -109 99 5 208 225 0 0 chr2 168968424 168968464 -84288119 + GA-rich Low_complexity Low_complexity 1 40 0 273 250 0 0 chr2 168969445 168969509 -84287074 + L2 LINE L2 3202 3265 -7 1189 226 61 18 chr2 168970355 168970604 -84285979 - MER58B DNA MER1_type -2079 341 73 1822 117 8 0 chr2 168970604 168970853 -84285730 + AluSx SINE Alu 54 304 -8 1189 226 61 18 chr2 168970853 168970930 -84285653 - MER58B DNA MER1_type -2347 73 1 1984 158 0 0 chr2 168971563 168971860 -84284723 + AluSx SINE Alu 2 298 -14 717 277 91 9 chr2 168972193 168972424 -84284159 - MIR SINE MIR 0 262 13 264 267 0 17 chr2 168972645 168972705 -84283878 + L2 LINE L2 3214 3272 0 255 61 0 0 chr2 168973422 168973455 -84283128 + (TCCA)n Simple_repeat Simple_repeat 2 34 0 298 296 0 0 chr2 168973466 168973537 -84283046 - L2 LINE L2 0 3272 3202 493 202 0 0 chr2 168974620 168974714 -84281869 + MIR SINE MIR 45 138 -70 209 250 0 0 chr2 168975830 168975874 -84280709 + MIR SINE MIR 219 262 0 243 128 0 0 chr2 168975878 168975888 -84280695 + (CAA)n Simple_repeat Simple_repeat 2 11 -37 2190 80 31 7 chr2 168975888 168976176 -84280407 + AluSg SINE Alu 1 295 -15 243 128 0 0 chr2 168976176 168976212 -84280371 + (CAA)n Simple_repeat Simple_repeat 10 48 0 905 284 113 27 chr2 168976454 168976898 -84279685 + L2 LINE L2 2832 3313 0 317 80 0 20 chr2 168977338 168977388 -84279195 + (TA)n Simple_repeat Simple_repeat 1 49 0 488 301 174 9 chr2 168979856 168980075 -84276508 - MIR SINE MIR -6 256 2 220 366 0 0 chr2 168980080 168980151 -84276432 - L3 LINE CR1 -106 1471 1401 270 287 153 20 chr2 168980169 168980348 -84276235 - MIR SINE MIR -41 221 21 236 320 19 39 chr2 168980355 168980458 -84276125 - L3 LINE CR1 -192 1385 1285 199 300 113 25 chr2 168982805 168982885 -84273698 - L3 LINE CR1 -11 1566 1480 264 315 39 2 chr2 168982994 168983161 -84273422 + L1MC2 LINE L1 5443 5604 -517 872 256 88 5 chr2 168983251 168983672 -84272911 + L1M4 LINE L1 3083 3538 -2608 3479 138 31 64 chr2 168983672 168984409 -84272174 + L1MC2 LINE L1 5623 6335 -9 250 405 91 0 chr2 168984738 168984859 -84271724 + L2 LINE L2 3122 3253 -19 238 303 99 10 chr2 168984877 168984978 -84271605 - MIR SINE MIR -85 123 39 306 311 228 0 chr2 168985593 168985773 -84270810 + MIR SINE MIR 18 238 -24 207 256 0 0 chr2 168985866 168985905 -84270678 + (CTCA)n Simple_repeat Simple_repeat 3 41 0 319 311 174 29 chr2 168986188 168986574 -84270009 - L2 LINE L2 0 3313 2872 347 293 9 19 chr2 168986608 168986714 -84269869 - MER5B DNA MER1_type -73 105 1 467 301 38 30 chr2 168986726 168986962 -84269621 - L2 LINE L2 -448 2866 2629 453 226 19 101 chr2 168987165 168987231 -84269352 - MER5B DNA MER1_type 0 178 108 1843 187 0 0 chr2 168987231 168987525 -84269058 + AluJo SINE Alu 4 297 -15 453 226 19 101 chr2 168987525 168987617 -84268966 - MER5B DNA MER1_type -70 108 33 189 227 0 0 chr2 168987880 168987990 -84268593 + (TG)n Simple_repeat Simple_repeat 2 111 0 963 182 6 28 chr2 168988429 168988610 -84267973 - FRAM SINE Alu 0 176 1 188 372 39 28 chr2 168989324 168989504 -84267079 - L2 LINE L2 -282 2990 2809 487 276 159 72 chr2 168989817 168990320 -84266263 - L2 LINE L2 -833 2481 1935 862 203 100 7 chr2 168991246 168991544 -84265039 - MER33 DNA MER1_type 0 363 5 2822 104 0 10 chr2 168992741 168993146 -84263437 + L1PA11 LINE L1 5774 6174 0 32 26 0 0 chr2 168994536 168994575 -84262008 + AT_rich Low_complexity Low_complexity 1 39 0 307 215 13 0 chr2 168994601 168994680 -84261903 - MER116 DNA Mariner 0 80 1 239 271 71 0 chr2 168995324 168995394 -84261189 + MIR SINE MIR 36 110 -152 873 196 71 82 chr2 168995395 168995520 -84261063 + MLT1A1 LTR MaLR 1 126 -239 2237 115 7 0 chr2 168995520 168995825 -84260758 + AluSp SINE Alu 1 307 -6 873 196 71 82 chr2 168995825 168996066 -84260517 + MLT1A1 LTR MaLR 126 363 -2 6367 199 75 48 chr2 168996068 168996817 -84259766 + MLT1A1-int LTR MaLR 1 728 -1007 1352 104 90 0 chr2 168996817 168997028 -84259555 + MER30 DNA MER1_type 1 230 0 6367 199 75 48 chr2 168997028 168997960 -84258623 + MLT1A1-int LTR MaLR 728 1729 -6 1178 166 142 59 chr2 168997964 168998301 -84258282 + MLT1A1 LTR MaLR 1 365 0 217 313 111 0 chr2 168998324 168998423 -84258160 + MIR SINE MIR 131 240 -22 1684 120 109 14 chr2 168998897 168999172 -84257411 + AluSq SINE Alu 1 301 -12 1320 239 79 44 chr2 168999361 168999843 -84256740 + L2 LINE L2 2810 3308 -5 2582 171 66 122 chr2 168999977 169000747 -84255836 + LTR8A LTR ERV1 1 727 0 326 291 108 54 chr2 169000802 169001005 -84255578 + LTR50 LTR ERVL 1 214 -581 290 200 191 0 chr2 169001155 169001260 -84255323 + LTR33A LTR ERVL 364 488 -35 2177 129 0 0 chr2 169001261 169001555 -84255028 - AluSx SINE Alu -18 294 1 2601 166 74 0 chr2 169001649 169002082 -84254501 + LTR24 LTR ERV1 3 467 0 795 217 5 48 chr2 169002129 169002318 -84254265 - MER58A DNA MER1_type -2 222 42 475 286 122 34 chr2 169003362 169003600 -84252983 - MIR SINE MIR 0 262 4 908 146 6 0 chr2 169004342 169004520 -84252063 + CT-rich Low_complexity Low_complexity 1 179 0 982 168 0 24 chr2 169004522 169004689 -84251894 - FRAM SINE Alu -14 162 1 23 0 0 0 chr2 169005114 169005137 -84251446 + AT_rich Low_complexity Low_complexity 1 23 0 716 289 16 11 chr2 169005202 169005392 -84251191 - L2 LINE L2 -1 3312 3122 3459 270 98 33 chr2 169005400 169005471 -84251112 - L2 LINE L2 -556 2758 2693 1973 142 0 41 chr2 169005471 169005787 -84250796 + AluSx SINE Alu 3 305 -7 3459 270 98 33 chr2 169005787 169005810 -84250773 - L2 LINE L2 -621 2693 2673 2255 202 86 72 chr2 169005810 169006425 -84250158 - MLT1E2 LTR MaLR -2 624 1 3459 270 98 33 chr2 169006425 169007755 -84248828 - L2 LINE L2 -641 2673 1240 1353 263 48 54 chr2 169008548 169009069 -84247514 + MLT1L LTR MaLR 90 607 -8 289 330 76 0 chr2 169009322 169009440 -84247143 + L2 LINE L2 3173 3299 -14 496 303 130 34 chr2 169009651 169010098 -84246485 + L2 LINE L2 2454 2857 -456 2137 142 117 28 chr2 169010098 169010493 -84246090 - MSTB1 LTR MaLR -2 430 1 496 303 130 34 chr2 169010493 169010559 -84246024 + L2 LINE L2 2857 3305 -8 296 290 161 23 chr2 169011815 169011926 -84244657 + MIR SINE MIR 1 116 -92 1096 199 0 35 chr2 169011937 169012163 -84244420 + MLT1F1 LTR MaLR 7 224 -318 1463 153 142 0 chr2 169012362 169012623 -84243960 + MLT1F1 LTR MaLR 266 563 -4 413 248 62 23 chr2 169012648 169012777 -84243806 + MIR SINE MIR 129 262 0 224 82 66 33 chr2 169014010 169014071 -84242512 + CT-rich Low_complexity Low_complexity 2 64 0 182 188 0 0 chr2 169014384 169014416 -84242167 + L2 LINE L2 2300 2331 -983 1519 121 5 5 chr2 169014845 169015060 -84241523 + AluSc SINE Alu 2 216 -93 248 234 91 110 chr2 169015549 169015703 -84240880 + L2 LINE L2 3161 3311 -2 34 42 0 0 chr2 169016564 169016612 -84239971 + AT_rich Low_complexity Low_complexity 1 48 0 285 287 40 27 chr2 169017870 169018020 -84238563 - MIR3 SINE MIR -25 183 32 281 273 56 20 chr2 169018246 169018378 -84238205 - MIR SINE MIR -67 141 20 267 315 74 0 chr2 169018502 169018610 -84237973 - L2 LINE L2 -1 3312 3197 1541 286 63 37 chr2 169019027 169019884 -84236699 - ERVL LTR ERVL -1452 4312 3396 567 211 18 0 chr2 169019885 169019994 -84236589 + MLT1C LTR MaLR 1 111 -356 828 158 7 7 chr2 169021196 169021348 -84235235 + MLT1C LTR MaLR 100 251 -139 2941 96 3 0 chr2 169021359 169021722 -84234861 - THE1B LTR MaLR 0 364 1 9514 105 92 28 chr2 169021722 169023208 -84233375 - THE1B-int LTR MaLR 0 1580 1 2950 99 0 3 chr2 169023208 169023573 -84233010 - THE1B LTR MaLR 0 364 1 882 173 7 0 chr2 169023591 169023730 -84232853 + MLT1C LTR MaLR 325 464 -3 285 120 0 40 chr2 169023845 169023895 -84232688 + MLT1F1 LTR MaLR 518 565 -2 1711 323 64 9 chr2 169023940 169024612 -84231971 - ERVL LTR ERVL -2495 3269 2561 801 250 39 42 chr2 169024641 169024901 -84231682 - ERVL LTR ERVL -3290 2474 2216 1328 184 5 0 chr2 169024904 169025122 -84231461 + MLT1D LTR MaLR 281 499 -6 735 269 32 56 chr2 169025621 169025870 -84230713 - LTR33 LTR ERVL -255 266 24 284 281 45 0 chr2 169025972 169026061 -84230522 + L2 LINE L2 3179 3271 -1 505 246 79 97 chr2 169027465 169027763 -84228820 - MER34 LTR ERV1 -45 497 230 345 282 0 0 chr2 169027944 169028029 -84228554 - MER34 LTR ERV1 -457 85 1 189 74 0 0 chr2 169029707 169029734 -84226849 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 334 219 0 62 chr2 169029790 169029886 -84226697 - MER57-int LTR ERV1 -1387 6150 6061 253 283 0 0 chr2 169031152 169031212 -84225371 - MER57-int LTR ERV1 -3824 5095 5036 334 104 75 60 chr2 169031575 169031642 -84224941 - L1MB2 LINE L1 -1 6170 6103 189 107 0 0 chr2 169032140 169032168 -84224415 + (T)n Simple_repeat Simple_repeat 1 28 0 582 184 94 65 chr2 169032187 169032294 -84224289 - MER106A DNA MER1_type -29 207 105 180 0 0 0 chr2 169032294 169032314 -84224269 + (TA)n Simple_repeat Simple_repeat 2 21 0 582 184 94 65 chr2 169032314 169032407 -84224176 - MER106A DNA MER1_type -131 105 1 2198 133 3 0 chr2 169032545 169032847 -84223736 - AluSx SINE Alu -9 303 1 484 191 0 0 chr2 169032868 169032957 -84223626 + MER89 LTR ERV1 1 89 -470 1334 211 47 0 chr2 169032973 169033252 -84223331 + MER89 LTR ERV1 268 559 0 242 133 0 22 chr2 169034221 169034266 -84222317 - L1MA9 LINE L1 -365 5947 5904 859 291 34 9 chr2 169034266 169034589 -84221994 + L1MA9 LINE L1 5951 6281 -31 320 296 80 92 chr2 169035104 169035418 -84221165 + L2 LINE L2 2178 2487 -827 195 274 97 0 chr2 169035568 169035630 -84220953 + L2 LINE L2 2720 2787 -527 291 368 58 23 chr2 169035748 169035919 -84220664 + L2 LINE L2 2915 3091 -181 796 282 77 0 chr2 169035986 169036220 -84220363 - MIR SINE MIR 0 262 11 357 307 0 10 chr2 169036234 169036335 -84220248 + L2 LINE L2 3214 3313 0 232 332 69 55 chr2 169036764 169036966 -84219617 + L3b LINE CR1 1111 1315 -268 225 0 0 0 chr2 169038562 169038587 -84217996 + (TA)n Simple_repeat Simple_repeat 2 26 0 4375 53 0 15 chr2 169038587 169039106 -84217477 - L1PA5 LINE L1 -10 6144 5634 370 213 0 0 chr2 169039324 169039399 -84217184 + MER116 DNA Mariner 6 80 0 1601 202 36 14 chr2 169039761 169040118 -84216465 - MLT1A1 LTR MaLR 0 365 1 2197 132 0 0 chr2 169040788 169041091 -84215492 + AluSx SINE Alu 1 303 -9 347 266 0 0 chr2 169041743 169041822 -84214761 + L2 LINE L2 3235 3313 0 320 301 144 6 chr2 169041970 169042143 -84214440 + MIR SINE MIR 60 256 -6 27 73 0 0 chr2 169042250 169042305 -84214278 + AT_rich Low_complexity Low_complexity 1 55 0 2081 129 0 0 chr2 169042434 169042712 -84213871 + AluSx SINE Alu 3 280 -32 237 289 10 39 chr2 169044315 169044419 -84212164 + LTR33 LTR ERVL 5 105 -416 368 67 0 0 chr2 169044420 169044465 -84212118 - MLT2B1 LTR ERVL 0 464 420 2842 122 34 11 chr2 169044465 169044901 -84211682 - Tigger2 DNA MER2_type 0 2718 2273 300 111 0 0 chr2 169044942 169044987 -84211596 + (TG)n Simple_repeat Simple_repeat 2 46 0 1691 192 38 38 chr2 169045012 169045356 -84211227 - MLT2B1 LTR ERVL -175 345 2 395 286 34 25 chr2 169045356 169045469 -84211114 + LTR33 LTR ERVL 99 212 -309 238 214 36 0 chr2 169045518 169045574 -84211009 + LTR33 LTR ERVL 464 521 0 211 285 76 56 chr2 169045578 169045722 -84210861 - L2 LINE L2 -193 3079 2933 899 197 88 35 chr2 169046295 169046750 -84209833 - MLT1G LTR MaLR -14 516 11 515 376 43 16 chr2 169047363 169047738 -84208845 + LTR16C LTR ERVL 89 473 -18 1817 223 64 40 chr2 169048036 169048340 -84208243 + MLT1F LTR MaLR 1 296 -358 2279 158 120 57 chr2 169048340 169048815 -84207768 - MLT1D LTR MaLR 0 505 1 1817 223 64 40 chr2 169048815 169049008 -84207575 + MLT1F LTR MaLR 296 630 -24 307 182 0 0 chr2 169049023 169049080 -84207503 + MLT1F1 LTR MaLR 509 559 -8 1438 227 7 20 chr2 169049336 169049640 -84206943 + AluJo SINE Alu 1 300 -12 928 163 29 77 chr2 169049647 169049856 -84206727 + L1MB8 LINE L1 5980 6178 0 340 181 24 24 chr2 169049863 169049946 -84206637 + L1ME3A LINE L1 5939 6021 -149 213 0 36 0 chr2 169049958 169049986 -84206597 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 983 128 0 45 chr2 169049986 169050142 -84206441 - AluSg/x SINE Alu -29 283 135 349 250 62 0 chr2 169050158 169050254 -84206329 + L1ME3A LINE L1 6058 6159 -11 21 36 0 0 chr2 169050726 169050754 -84205829 + AT_rich Low_complexity Low_complexity 1 28 0 667 249 17 45 chr2 169050850 169050868 -84205715 + Charlie1 DNA MER1_type 4 21 -2740 1807 232 37 35 chr2 169050868 169051386 -84205197 - LTR40a LTR ERVL 0 519 1 667 249 17 45 chr2 169051386 169051544 -84205039 + Charlie1 DNA MER1_type 21 175 -2586 774 174 14 0 chr2 169051552 169051690 -84204893 + Charlie1 DNA MER1_type 2622 2761 0 566 193 25 34 chr2 169052146 169052265 -84204318 + MER63 DNA MER1_type 9 752 -84 402 167 139 0 chr2 169052267 169052339 -84204244 + MER63 DNA MER1_type 979 1060 0 411 291 36 45 chr2 169053176 169053316 -84203267 - L1ME3A LINE L1 -261 5909 5770 2076 78 53 0 chr2 169053316 169053597 -84202986 - AluSp SINE Alu -17 296 1 411 291 36 45 chr2 169053597 169053679 -84202904 - L1ME3A LINE L1 -400 5770 5689 1613 129 4 0 chr2 169053803 169054036 -84202547 + AluSx SINE Alu 62 295 -17 433 205 172 70 chr2 169054495 169054768 -84201815 - L1ME4a LINE L1 -5 6116 5816 663 195 34 0 chr2 169054797 169054915 -84201668 - FLAM_C SINE Alu -10 123 2 592 258 98 104 chr2 169055155 169055683 -84200900 + MLT1F LTR MaLR 18 542 0 263 307 0 91 chr2 169055687 169055775 -84200808 + L2 LINE L2 3234 3313 0 208 296 178 7 chr2 169057334 169057469 -84199114 + L2 LINE L2 3000 3157 -115 462 75 0 0 chr2 169057523 169057590 -84198993 + (TGAA)n Simple_repeat Simple_repeat 4 70 0 201 171 0 0 chr2 169058076 169058111 -84198472 + A-rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 169058124 169058145 -84198438 + AT_rich Low_complexity Low_complexity 1 21 0 204 83 56 0 chr2 169058172 169058208 -84198375 + T-rich Low_complexity Low_complexity 5 42 0 734 210 249 42 chr2 169059382 169059597 -84196986 - MLT1G3 LTR MaLR 0 530 361 1493 221 20 8 chr2 169059597 169059955 -84196628 + MLT1A1 LTR MaLR 1 362 -3 734 210 249 42 chr2 169059955 169060048 -84196535 - MLT1G3 LTR MaLR -169 361 158 272 315 0 14 chr2 169060049 169060122 -84196461 + MER45 DNA AcHobo 1 72 -881 253 281 0 0 chr2 169060128 169060192 -84196391 + MER45 DNA AcHobo 1516 1579 -2 221 57 29 0 chr2 169060202 169060237 -84196346 + (GA)n Simple_repeat Simple_repeat 2 37 0 767 260 45 14 chr2 169060251 169060474 -84196109 - MLT1G1 LTR MaLR -365 230 1 38 85 0 0 chr2 169060859 169060953 -84195630 + AT_rich Low_complexity Low_complexity 1 94 0 1911 155 0 19 chr2 169060956 169061273 -84195310 - AluSx SINE Alu -1 311 1 510 243 19 0 chr2 169061843 169061950 -84194633 + MER81 DNA DNA 6 114 0 219 36 0 0 chr2 169062898 169062926 -84193657 + (CAGCT)n Simple_repeat Simple_repeat 4 31 0 490 270 50 25 chr2 169063163 169063322 -84193261 + MIR SINE MIR 50 212 -50 3467 269 78 52 chr2 169063725 169065146 -84191437 - L2 LINE L2 -1264 2050 593 2300 55 21 7 chr2 169065241 169065530 -84191053 + AluY SINE Alu 1 293 -18 1717 196 109 31 chr2 169065717 169066196 -84190387 + Charlie1b DNA MER1_type 8 523 0 283 269 65 0 chr2 169066534 169066642 -84189941 - L1ME4a LINE L1 0 6121 6007 21 0 0 0 chr2 169066755 169066776 -84189807 + AT_rich Low_complexity Low_complexity 1 21 0 291 54 0 0 chr2 169066890 169066927 -84189656 + (CA)n Simple_repeat Simple_repeat 1 37 0 403 302 47 52 chr2 169067044 169067276 -84189307 + L1M4 LINE L1 4569 4799 -1347 356 364 58 60 chr2 169068720 169069184 -84187399 + L2 LINE L2 2809 3271 -1 654 342 94 31 chr2 169069655 169070070 -84186513 - L3b LINE CR1 -4 1579 1139 2269 171 60 25 chr2 169070329 169070815 -84185768 + MLT1D LTR MaLR 3 505 0 338 323 159 15 chr2 169071013 169071214 -84185369 - MIR SINE MIR -12 250 21 279 288 88 50 chr2 169072207 169072367 -84184216 + L2 LINE L2 2313 2478 -836 1786 143 4 11 chr2 169072419 169072692 -84183891 + AluJb SINE Alu 27 297 -15 6666 124 29 6 chr2 169072763 169074540 -84182043 - L1MA3 LINE L1 -3 6302 4484 183 100 0 0 chr2 169074609 169074639 -84181944 + (TTG)n Simple_repeat Simple_repeat 2 31 0 2160 115 0 3 chr2 169074736 169075047 -84181536 - AluSq SINE Alu 0 310 1 1967 131 0 30 chr2 169075460 169075758 -84180825 + AluSx SINE Alu 1 289 -23 555 212 146 7 chr2 169076064 169076201 -84180382 - MER63A DNA MER1_type -5 205 50 462 226 27 41 chr2 169076369 169076515 -84180068 - L1MC5 LINE L1 -30 7931 7788 327 307 44 7 chr2 169076725 169076862 -84179721 - L1MC5 LINE L1 -426 7535 7394 243 0 0 0 chr2 169077076 169077103 -84179480 + (T)n Simple_repeat Simple_repeat 1 27 0 487 282 32 23 chr2 169077103 169077323 -84179260 - L1MC5 LINE L1 -777 7184 6963 2086 114 0 7 chr2 169077340 169077648 -84178935 + AluSq SINE Alu 3 313 0 232 259 25 37 chr2 169077678 169077759 -84178824 - L1MC4 LINE L1 -31 8011 7932 624 259 192 20 chr2 169077768 169078169 -84178414 - L1MC4 LINE L1 -1115 6927 6458 904 283 111 16 chr2 169078249 169078617 -84177966 - L1MC4 LINE L1 -1987 5821 5419 796 233 24 114 chr2 169078654 169079236 -84177347 - L1ME2 LINE L1 -9 6155 5489 573 279 109 40 chr2 169079271 169080070 -84176513 - L1ME2 LINE L1 -2172 3974 3121 3103 263 74 30 chr2 169080071 169081815 -84174768 - L1MC4 LINE L1 -2185 3961 2142 1672 201 8 41 chr2 169081887 169082190 -84174393 - MER82 DNA MER2_type 0 653 362 1812 167 31 0 chr2 169082190 169082478 -84174105 + AluJb SINE Alu 1 297 -15 1672 201 8 41 chr2 169082478 169082538 -84174045 - MER82 DNA MER2_type -291 362 302 183 80 0 0 chr2 169082821 169082846 -84173737 + (T)n Simple_repeat Simple_repeat 1 25 0 234 248 26 88 chr2 169083245 169083358 -84173225 - MER5A DNA MER1_type -80 109 4 27 49 0 0 chr2 169083427 169083468 -84173115 + AT_rich Low_complexity Low_complexity 1 41 0 2288 110 0 0 chr2 169083618 169083918 -84172665 - AluSq SINE Alu -13 300 1 380 287 30 23 chr2 169084091 169084290 -84172293 + MLT1J LTR MaLR 16 282 -310 347 269 106 80 chr2 169084383 169084658 -84171925 + MLT1J LTR MaLR 228 509 -2 285 182 0 0 chr2 169084970 169085025 -84171558 + (CA)n Simple_repeat Simple_repeat 2 56 0 243 270 52 7 chr2 169085546 169085654 -84170929 - MIR SINE MIR -66 142 28 411 289 107 11 chr2 169086051 169086238 -84170345 - Charlie8 DNA MER1_type -2166 251 47 227 217 22 0 chr2 169087270 169087316 -84169267 + L2 LINE L2 3226 3272 0 25 0 0 0 chr2 169088553 169088578 -84168005 + AT_rich Low_complexity Low_complexity 1 25 0 361 235 49 0 chr2 169088686 169088767 -84167816 - MER94 DNA DNA -25 109 25 392 67 17 0 chr2 169090021 169090081 -84166502 + (TC)n Simple_repeat Simple_repeat 2 62 0 873 276 141 25 chr2 169091579 169092212 -84164371 + L1ME4a LINE L1 5415 6120 -1 407 252 54 9 chr2 169096667 169096778 -84159805 + MIR3 SINE MIR 52 167 -41 376 215 370 7 chr2 169097066 169097201 -84159382 + MER5A DNA MER1_type 4 187 -2 217 214 0 0 chr2 169097512 169097554 -84159029 + CT-rich Low_complexity Low_complexity 1 42 0 291 309 121 0 chr2 169098124 169098226 -84158357 + MER45 DNA AcHobo 21 1539 -42 705 302 163 26 chr2 169098282 169098858 -84157725 + L1MC4a LINE L1 5458 6112 -1696 1856 219 99 14 chr2 169098933 169099496 -84157087 + L1ME2 LINE L1 5544 6154 -10 476 219 22 22 chr2 169099541 169099678 -84156905 + L1MC5 LINE L1 7794 7930 -31 244 314 192 27 chr2 169100214 169100475 -84156108 + L3b LINE CR1 1227 1530 -53 180 125 0 0 chr2 169100740 169100772 -84155811 + (TA)n Simple_repeat Simple_repeat 2 33 0 1982 61 0 4 chr2 169101651 169101939 -84154644 - AluY SINE Alu 0 326 40 209 351 143 0 chr2 169102356 169102510 -84154073 - MIR SINE MIR -3 259 84 2944 174 18 4 chr2 169102715 169103272 -84153311 - L1MB7 LINE L1 -58 6126 5562 4137 199 49 8 chr2 169103995 169104482 -84152101 - L1MB5 LINE L1 -8 6166 5626 411 21 0 0 chr2 169104482 169104530 -84152053 + (TA)n Simple_repeat Simple_repeat 1 48 0 4137 199 49 8 chr2 169104530 169104917 -84151666 - L1MB5 LINE L1 -548 5626 5256 46 86 0 0 chr2 169104933 169105049 -84151534 + AT_rich Low_complexity Low_complexity 1 116 0 24 32 0 0 chr2 169105121 169105152 -84151431 + AT_rich Low_complexity Low_complexity 1 31 0 2233 109 0 22 chr2 169105459 169105770 -84150813 - AluSx SINE Alu -8 304 1 430 232 55 118 chr2 169106785 169107057 -84149526 + Charlie8 DNA MER1_type 75 1416 -1001 2060 115 7 0 chr2 169107187 169107532 -84149051 + AluSq SINE Alu 3 349 0 844 321 98 25 chr2 169108798 169109287 -84147296 - L2 LINE L2 -4 3309 2783 627 306 53 5 chr2 169109681 169109890 -84146693 - MIR SINE MIR -32 230 12 242 314 0 47 chr2 169111377 169111463 -84145120 + L2 LINE L2 3232 3313 0 21 0 0 0 chr2 169111488 169111509 -84145074 + AT_rich Low_complexity Low_complexity 1 21 0 195 42 0 0 chr2 169111776 169111800 -84144783 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 417 221 35 12 chr2 169112101 169112187 -84144396 + L2 LINE L2 3185 3272 0 714 189 28 0 chr2 169112425 169112568 -84144015 + MER3 DNA MER1_type 7 153 -56 371 316 0 0 chr2 169114872 169114967 -84141616 + MIR3 SINE MIR 103 197 -11 1362 167 51 10 chr2 169115269 169115562 -84141021 - L1MA4 LINE L1 -12 6288 5984 253 289 53 0 chr2 169115771 169115847 -84140736 - L2 LINE L2 0 3272 3193 342 298 78 52 chr2 169116006 169116197 -84140386 - MIR3 SINE MIR -12 196 1 235 218 0 0 chr2 169119615 169119670 -84136913 + GA-rich Low_complexity Low_complexity 2 56 0 1269 284 64 16 chr2 169120834 169121339 -84135244 + L2 LINE L2 2775 3311 -2 400 298 112 21 chr2 169121339 169121527 -84135056 - MIR SINE MIR -55 207 3 1317 139 48 0 chr2 169121826 169122035 -84134548 - MER20 DNA MER1_type 0 219 1 184 327 117 44 chr2 169122330 169122578 -84134005 + L2 LINE L2 2442 2707 -607 244 280 8 129 chr2 169122912 169123044 -84133539 - L2 LINE L2 -30 3283 3168 321 93 0 0 chr2 169123242 169123296 -84133287 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 2271 109 0 0 chr2 169123296 169123589 -84132994 - AluSg SINE Alu -17 293 1 212 388 80 15 chr2 169123612 169123875 -84132708 - L2 LINE L2 -453 2861 2582 * 681 185 152 0 chr2 169123860 169124011 -84132572 + MER5A DNA MER1_type 16 189 0 501 347 96 20 chr2 169124033 169124376 -84132207 - L2 LINE L2 -725 2589 2221 1889 157 13 20 chr2 169124475 169124781 -84131802 + AluSx SINE Alu 1 304 -8 181 268 54 45 chr2 169124937 169125049 -84131534 + L2 LINE L2 2871 2983 -330 27 73 0 0 chr2 169126535 169126590 -84129993 + AT_rich Low_complexity Low_complexity 1 55 0 21 0 0 0 chr2 169127095 169127116 -84129467 + AT_rich Low_complexity Low_complexity 1 21 0 194 352 45 0 chr2 169127225 169127313 -84129270 - MIR SINE MIR -84 124 33 219 36 0 0 chr2 169133878 169133906 -84122677 + (CA)n Simple_repeat Simple_repeat 2 29 0 911 315 102 39 chr2 169135445 169136270 -84120313 + L2 LINE L2 1537 2413 -901 443 300 0 129 chr2 169136355 169136618 -84119965 + L2 LINE L2 3038 3266 -6 243 348 104 17 chr2 169136663 169136778 -84119805 + MER5A DNA MER1_type 22 146 -43 331 274 77 17 chr2 169137555 169137672 -84118911 + L3 LINE CR1 846 969 -608 252 0 0 0 chr2 169137755 169137783 -84118800 + (CA)n Simple_repeat Simple_repeat 1 28 0 206 296 84 0 chr2 169137836 169137907 -84118676 + L3 LINE CR1 1498 1574 -3 294 326 82 0 chr2 169140697 169140795 -84115788 - L2 LINE L2 -5 3267 3162 357 298 33 20 chr2 169141934 169142085 -84114498 + MIR SINE MIR 12 164 -98 324 250 45 11 chr2 169143440 169143528 -84113055 + MIR SINE MIR 148 238 -24 256 268 0 0 chr2 169143699 169143755 -84112828 + L2 LINE L2 3258 3313 0 273 283 80 44 chr2 169145182 169145295 -84111288 - L2 LINE L2 -2 3311 3195 396 267 43 0 chr2 169145799 169145915 -84110668 + MIR SINE MIR 49 169 -93 1250 225 86 48 chr2 169147827 169148267 -84108316 + MLT1C LTR MaLR 11 467 0 597 303 82 33 chr2 169148334 169148700 -84107883 + MER57A LTR ERV1 14 397 -6 2111 113 17 3 chr2 169148992 169149294 -84107289 - AluSp SINE Alu -7 306 1 21 0 0 0 chr2 169150060 169150081 -84106502 + AT_rich Low_complexity Low_complexity 1 21 0 225 338 14 0 chr2 169150330 169150404 -84106179 + MIR SINE MIR 41 115 -93 275 280 60 48 chr2 169150668 169150836 -84105747 - MARNA DNA Mariner -9 577 408 233 349 15 8 chr2 169150938 169151070 -84105513 + MARNA DNA Mariner 246 378 -208 1900 44 9 4 chr2 169151197 169151424 -84105159 - AluY SINE Alu -16 295 68 2338 85 0 0 chr2 169151458 169151751 -84104832 + AluSc SINE Alu 1 293 -16 237 259 82 24 chr2 169151884 169151969 -84104614 + MARNA DNA Mariner 409 498 -88 22 0 0 0 chr2 169152567 169152589 -84103994 + AT_rich Low_complexity Low_complexity 1 22 0 362 342 152 27 chr2 169153966 169154334 -84102249 - L2 LINE L2 -341 2973 2560 1044 244 34 84 chr2 169154482 169154896 -84101687 + MLT1J1 LTR MaLR 24 416 -30 226 284 9 64 chr2 169154957 169155066 -84101517 - L2 LINE L2 -1219 2095 1993 2370 97 0 0 chr2 169156578 169156918 -84099665 + AluSc SINE Alu 1 340 0 23 0 0 0 chr2 169156960 169156983 -84099600 + AT_rich Low_complexity Low_complexity 1 23 0 516 325 98 5 chr2 169158227 169158421 -84098162 + MIR SINE MIR 51 262 0 23 0 0 0 chr2 169161857 169161880 -84094703 + AT_rich Low_complexity Low_complexity 1 23 0 447 19 0 0 chr2 169162044 169162096 -84094487 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 22 35 0 0 chr2 169162478 169162507 -84094076 + AT_rich Low_complexity Low_complexity 1 29 0 292 341 101 0 chr2 169163542 169163671 -84092912 + MIR3 SINE MIR 19 160 -48 * 555 309 23 17 chr2 169163662 169163837 -84092746 - MIR3 SINE MIR 0 208 33 263 180 0 20 chr2 169163858 169163908 -84092675 + MIR3 SINE MIR 151 199 -9 1787 116 56 3 chr2 169164740 169165024 -84091559 + AluSx SINE Alu 1 299 -13 209 118 0 0 chr2 169165795 169165829 -84090754 + L2 LINE L2 3272 3305 -8 21 0 0 0 chr2 169165974 169165995 -84090588 + AT_rich Low_complexity Low_complexity 1 21 0 375 292 50 87 chr2 169166122 169166444 -84090139 + L2 LINE L2 2664 2973 -341 28 79 0 0 chr2 169166603 169166666 -84089917 + AT_rich Low_complexity Low_complexity 1 63 0 25 51 0 0 chr2 169167625 169167664 -84088919 + AT_rich Low_complexity Low_complexity 1 39 0 587 299 30 53 chr2 169168488 169168752 -84087831 - MIR SINE MIR -4 258 1 232 286 0 48 chr2 169169219 169169282 -84087301 + MER91 DNA MER1_type 130 189 -1 342 335 81 64 chr2 169171274 169171632 -84084951 + L2 LINE L2 2950 3313 0 258 95 0 0 chr2 169171644 169171686 -84084897 + (GCTG)n Simple_repeat Simple_repeat 4 45 0 268 319 67 8 chr2 169171707 169171826 -84084757 + MIR3 SINE MIR 76 201 -7 223 290 14 0 chr2 169172703 169172772 -84083811 + MIR SINE MIR 183 252 -10 361 324 0 9 chr2 169173910 169174015 -84082568 + L2 LINE L2 3205 3308 -5 22 0 0 0 chr2 169174141 169174163 -84082420 + AT_rich Low_complexity Low_complexity 1 22 0 360 276 52 39 chr2 169174168 169174317 -84082266 + MER5A DNA MER1_type 27 185 -4 570 275 122 11 chr2 169175707 169175896 -84080687 - MIR SINE MIR -48 214 5 473 281 118 46 chr2 169176578 169176816 -84079767 + L2 LINE L2 2262 2516 -798 3984 214 60 13 chr2 169176916 169178124 -84078459 - L1M3 LINE L1 -733 5447 4088 3799 127 38 156 chr2 169178158 169179195 -84077388 + pTR5 LTR ERV1 6 277 -437 266 286 0 0 chr2 169179195 169179272 -84077311 + LTR30 LTR ERV1 544 620 -102 775 102 0 0 chr2 169179275 169179394 -84077189 + pTR5 LTR ERV1 48 400 -2038 2293 205 38 45 chr2 169179402 169180041 -84076542 - L1M3 LINE L1 -2104 4042 3409 1577 148 72 0 chr2 169180111 169180374 -84076209 - AluSx SINE Alu -30 282 1 22 80 0 0 chr2 169180469 169180519 -84076064 + AT_rich Low_complexity Low_complexity 1 50 0 6638 55 4 0 chr2 169180706 169181710 -84074873 - L1PA7 LINE L1 -4 6150 5124 220 250 17 0 chr2 169182478 169182538 -84074045 + (TA)n Simple_repeat Simple_repeat 1 61 0 1076 161 0 32 chr2 169182629 169182815 -84073768 - AluJb SINE Alu -127 185 6 24 32 0 0 chr2 169187682 169187713 -84068870 + AT_rich Low_complexity Low_complexity 1 31 0 273 261 62 0 chr2 169189193 169189258 -84067325 - L2 LINE L2 -60 3253 3185 288 324 36 14 chr2 169189303 169189442 -84067141 + MER117 DNA MER1_type 55 196 -1 222 270 40 40 chr2 169190105 169190179 -84066404 - MIR3 SINE MIR -46 162 89 25 0 0 0 chr2 169190250 169190275 -84066308 + AT_rich Low_complexity Low_complexity 1 25 0 646 241 86 0 chr2 169191176 169191338 -84065245 - MIR SINE MIR -46 216 41 349 348 75 38 chr2 169191423 169191742 -84064841 - L2 LINE L2 -2316 998 668 264 329 12 0 chr2 169191807 169191889 -84064694 + HAL1 LINE L1 1 83 -2424 252 0 0 0 chr2 169192125 169192153 -84064430 + (A)n Simple_repeat Simple_repeat 1 28 0 1849 195 54 13 chr2 169192558 169192921 -84063662 + MLT2B2 LTR ERVL 1 378 -36 493 76 25 0 chr2 169192921 169193000 -84063583 + (TCTA)n Simple_repeat Simple_repeat 2 82 0 1849 195 54 13 chr2 169193000 169193037 -84063546 + MLT2B2 LTR ERVL 378 412 -2 821 323 91 15 chr2 169193048 169193662 -84062921 + HAL1 LINE L1 1071 1731 -776 231 234 7 124 chr2 169194049 169194194 -84062389 + HAL1b LINE L1 775 902 -446 577 296 61 47 chr2 169194480 169194973 -84061610 + L1MC/D LINE L1 5315 5814 -1994 525 279 17 17 chr2 169195112 169195284 -84061299 + MER97b DNA MER1_type? 8 179 -874 225 198 99 25 chr2 169195364 169195445 -84061138 + Charlie8 DNA MER1_type 381 467 -1950 816 283 66 7 chr2 169196047 169196333 -84060250 + L2 LINE L2 3011 3313 0 24 0 0 0 chr2 169196791 169196815 -84059768 + AT_rich Low_complexity Low_complexity 1 24 0 746 282 49 76 chr2 169198010 169198441 -84058142 - LTR16A LTR ERVL -2 455 29 1407 187 88 54 chr2 169198453 169198806 -84057777 - MLT1A1 LTR MaLR 0 365 1 1235 184 58 19 chr2 169199009 169199318 -84057265 + MER33 DNA MER1_type 4 324 0 1567 203 13 45 chr2 169199503 169199878 -84056705 - MLT1A2 LTR MaLR -11 363 1 218 302 0 0 chr2 169200986 169201049 -84055534 - MIR SINE MIR -6 256 194 222 91 0 0 chr2 169201429 169201462 -84055121 + (TC)n Simple_repeat Simple_repeat 2 34 0 727 272 136 0 chr2 169201570 169201776 -84054807 - MIR SINE MIR -11 251 18 183 254 68 0 chr2 169201793 169201852 -84054731 - MIR SINE MIR -126 136 74 738 315 95 35 chr2 169202037 169202590 -84053993 + L2 LINE L2 2455 3056 -257 2053 107 0 0 chr2 169203105 169203375 -84053208 - AluSc SINE Alu -39 270 1 258 299 29 72 chr2 169203430 169203637 -84052946 - MARNA DNA Mariner -143 443 246 213 139 0 0 chr2 169203679 169203722 -84052861 + (CTAG)n Simple_repeat Simple_repeat 1 43 0 252 236 42 28 chr2 169204163 169204235 -84052348 + MIR SINE MIR 184 256 -6 1101 103 12 6 chr2 169204348 169204513 -84052070 + L1PA10 LINE L1 5998 6163 -5 2308 204 146 40 chr2 169204806 169205499 -84051084 - LTR41 LTR ERVL -6 767 2 33 25 0 0 chr2 169205827 169205867 -84050716 + AT_rich Low_complexity Low_complexity 1 40 0 2388 50 0 10 chr2 169206171 169206470 -84050113 + AluY SINE Alu 1 296 -15 237 285 271 0 chr2 169206956 169207107 -84049476 - MIR SINE MIR -48 214 23 450 266 73 57 chr2 169208224 169208353 -84048230 - MIR3 SINE MIR 0 208 74 1866 134 31 0 chr2 169208353 169208645 -84047938 - AluSx SINE Alu -11 301 1 450 266 73 57 chr2 169208645 169208692 -84047891 - MIR3 SINE MIR -134 74 29 1506 242 60 20 chr2 169209762 169210300 -84046283 + MLT1E LTR MaLR 1 591 -2 368 346 31 0 chr2 169210327 169210454 -84046129 - MIR3 SINE MIR -65 143 13 710 292 69 38 chr2 169211975 169212065 -84044518 - L3 LINE CR1 -155 1422 1336 1786 163 4 0 chr2 169212065 169212366 -84044217 - AluSx SINE Alu 0 307 6 710 292 69 38 chr2 169212366 169212565 -84044018 - L3 LINE CR1 -241 1336 1123 631 270 171 55 chr2 169212565 169212928 -84043655 + MLT1J LTR MaLR 1 405 -106 337 250 12 0 chr2 169213820 169213900 -84042683 + MER117 DNA MER1_type 6 86 -111 278 250 46 172 chr2 169214673 169214749 -84041834 + L2 LINE L2 3005 3089 -224 2733 63 0 0 chr2 169214749 169215100 -84041483 + L1PA5 LINE L1 5802 6152 -2 278 250 46 172 chr2 169215100 169215371 -84041212 + L2 LINE L2 3089 3308 -5 21 0 0 0 chr2 169218148 169218169 -84038414 + AT_rich Low_complexity Low_complexity 1 21 0 1629 206 0 6 chr2 169219803 169220114 -84036469 + AluJo SINE Alu 1 309 -3 185 0 0 39 chr2 169220120 169220146 -84036437 + (GAAAA)n Simple_repeat Simple_repeat 4 28 0 375 128 117 0 chr2 169220450 169220544 -84036039 + L1MA7 LINE L1 6183 6287 -4 216 200 0 0 chr2 169220955 169221015 -84035568 + (CAT)n Simple_repeat Simple_repeat 2 61 0 1212 224 26 0 chr2 169222235 169222507 -84034076 + L1ME3A LINE L1 5878 6156 -14 256 329 0 0 chr2 169222740 169222825 -84033758 - MIR SINE MIR -2 260 176 23 0 0 0 chr2 169223369 169223392 -84033191 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 169225356 169225378 -84031205 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr2 169225466 169225492 -84031091 + AT_rich Low_complexity Low_complexity 1 26 0 25 31 0 0 chr2 169225803 169225835 -84030748 + AT_rich Low_complexity Low_complexity 1 32 0 279 289 21 70 chr2 169227472 169227614 -84028969 + MER5A DNA MER1_type 7 141 -48 423 183 87 17 chr2 169227822 169227937 -84028646 + MIR SINE MIR 69 191 -71 448 311 56 20 chr2 169228024 169228220 -84028363 + MIR SINE MIR 20 222 -40 1161 288 126 35 chr2 169229302 169229938 -84026645 + L3 LINE CR1 795 1488 -89 316 293 72 8 chr2 169230360 169230479 -84026104 - MIR SINE MIR -17 191 49 372 22 0 0 chr2 169232400 169232445 -84024138 + (CA)n Simple_repeat Simple_repeat 1 45 0 33 100 0 0 chr2 169232693 169232803 -84023780 + AT_rich Low_complexity Low_complexity 1 110 0 250 220 20 0 chr2 169234027 169234077 -84022506 - L2 LINE L2 0 3313 3263 271 236 0 0 chr2 169235553 169235608 -84020975 + L2 LINE L2 3218 3272 0 291 286 22 62 chr2 169236345 169236523 -84020060 + L1MC/D LINE L1 5402 5572 -594 27 29 0 0 chr2 169236660 169236694 -84019889 + AT_rich Low_complexity Low_complexity 1 34 0 25 0 0 0 chr2 169237165 169237190 -84019393 + AT_rich Low_complexity Low_complexity 1 25 0 31 0 0 0 chr2 169238224 169238255 -84018328 + AT_rich Low_complexity Low_complexity 1 31 0 273 247 35 0 chr2 169238478 169238563 -84018020 - L1ME1 LINE L1 -7 6159 6072 * 297 236 73 73 chr2 169238543 169238573 -84018010 - L1MA10 LINE L1 -56 6278 6249 1243 207 27 65 chr2 169238573 169238926 -84017657 - L1ME1 LINE L1 -69 6097 5760 486 226 48 78 chr2 169239822 169240052 -84016531 - MIR SINE MIR -31 231 9 25 75 0 0 chr2 169240518 169240571 -84016012 + AT_rich Low_complexity Low_complexity 1 53 0 282 143 0 0 chr2 169242250 169242299 -84014284 + (CA)n Simple_repeat Simple_repeat 2 50 0 707 266 68 0 chr2 169242906 169243098 -84013485 + MER63A DNA MER1_type 5 209 -1 181 263 93 110 chr2 169243264 169243500 -84013083 + L2 LINE L2 2820 3051 -221 30 45 0 0 chr2 169245806 169245850 -84010733 + AT_rich Low_complexity Low_complexity 1 44 0 2091 120 0 13 chr2 169246598 169246898 -84009685 - AluSq SINE Alu -17 296 1 322 294 55 9 chr2 169246954 169247063 -84009520 + L2 LINE L2 3199 3312 -1 281 278 0 22 chr2 169247065 169247155 -84009428 + GA-rich Low_complexity Low_complexity 1 88 0 23 0 0 0 chr2 169247233 169247256 -84009327 + AT_rich Low_complexity Low_complexity 1 23 0 1730 129 0 36 chr2 169247674 169247952 -84008631 + AluJb SINE Alu 15 282 -30 455 282 67 29 chr2 169248200 169248602 -84007981 + L1ME4a LINE L1 5414 5857 -264 2081 106 0 0 chr2 169248770 169249097 -84007486 + AluSx SINE Alu 1 327 0 1878 202 58 0 chr2 169249110 169249520 -84007063 - MER63B DNA MER1_type 0 436 3 24 0 0 0 chr2 169250056 169250080 -84006503 + AT_rich Low_complexity Low_complexity 1 24 0 503 170 44 175 chr2 169251335 169251541 -84005042 - MIR SINE MIR -49 213 35 1153 204 82 99 chr2 169251577 169251864 -84004719 - MLT1B LTR MaLR -5 385 105 2207 101 7 0 chr2 169251864 169252160 -84004423 - AluSx SINE Alu -14 298 1 1153 204 82 99 chr2 169252160 169252264 -84004319 - MLT1B LTR MaLR -285 105 1 1894 222 14 63 chr2 169252264 169252755 -84003828 - MLT1B-int LTR MaLR 0 1735 1269 374 272 0 0 chr2 169252857 169252949 -84003634 - MLT1B-int LTR MaLR -968 767 676 1343 159 168 9 chr2 169253005 169253578 -84003005 - MLT1-int LTR MaLR -485 886 16 223 296 80 0 chr2 169254063 169254151 -84002432 + MIR3 SINE MIR 108 202 -6 198 0 0 0 chr2 169254604 169254626 -84001957 + (CAA)n Simple_repeat Simple_repeat 3 24 0 426 305 7 26 chr2 169255336 169255490 -84001093 - MER5B DNA MER1_type 0 178 28 580 270 107 10 chr2 169255793 169255989 -84000594 - MIR SINE MIR -21 241 27 27 0 0 0 chr2 169256689 169256716 -83999867 + AT_rich Low_complexity Low_complexity 1 27 0 2209 106 3 3 chr2 169257819 169258270 -83998313 - AluY SINE Alu 0 451 1 206 326 43 22 chr2 169258314 169258406 -83998177 + L2 LINE L2 3160 3253 -19 204 40 0 0 chr2 169258412 169258437 -83998146 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 314 326 54 33 chr2 169259019 169259203 -83997380 - MIR SINE MIR -46 216 29 315 0 0 0 chr2 169260499 169260534 -83996049 + (TG)n Simple_repeat Simple_repeat 1 35 0 795 208 64 2 chr2 169260588 169260854 -83995729 - MER58B DNA MER1_type 0 341 1 645 260 68 16 chr2 169260908 169261100 -83995483 + MIR SINE MIR 59 260 -2 262 211 0 40 chr2 169261976 169262052 -83994531 + (CGGG)n Simple_repeat Simple_repeat 2 74 0 503 301 65 27 chr2 169264167 169264353 -83992230 - L2 LINE L2 0 3313 3121 376 313 178 0 chr2 169265058 169265266 -83991317 + MIR SINE MIR 2 246 -16 507 73 0 0 chr2 169265363 169265431 -83991152 + (TA)n Simple_repeat Simple_repeat 1 68 0 320 264 102 42 chr2 169265650 169265866 -83990717 - Charlie7 DNA MER1_type -669 1943 1715 306 0 0 0 chr2 169265868 169265902 -83990681 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 7729 19 0 0 chr2 169265902 169267489 -83989094 - L1PA3 LINE L1 -13 6142 4556 3899 103 67 62 chr2 169267489 169268225 -83988358 - LTR1 LTR ERV1 -46 739 1 16864 147 41 18 chr2 169268268 169269989 -83986594 - HUERS-P2 LTR ERV1 0 3088 1277 2193 132 0 3 chr2 169269989 169270300 -83986283 - AluSx SINE Alu -2 310 1 16864 147 41 18 chr2 169270300 169271359 -83985224 - HUERS-P2 LTR ERV1 -1811 1277 244 768 183 0 54 chr2 169271415 169271601 -83984982 + pTR5 LTR ERV1 743 918 -1520 1827 122 4 40 chr2 169271611 169271889 -83984694 + AluSx SINE Alu 31 298 -14 361 196 80 80 chr2 169271889 169272001 -83984582 - HUERS-P2 LTR ERV1 -2976 112 1 3561 121 64 88 chr2 169272016 169272736 -83983847 - LTR1 LTR ERV1 -67 718 16 305 215 283 29 chr2 169272843 169273122 -83983461 + Charlie7 DNA MER1_type 2234 2583 -29 42 0 0 0 chr2 169273123 169273165 -83983418 + AT_rich Low_complexity Low_complexity 1 42 0 4944 88 22 0 chr2 169273169 169273847 -83982736 - L1PA13 LINE L1 -6 6157 5465 3380 195 47 6 chr2 169274263 169274884 -83981699 + MER82 DNA MER2_type 7 652 -1 1351 219 19 35 chr2 169274887 169275256 -83981327 + MLT1A1 LTR MaLR 3 365 0 2488 71 0 0 chr2 169275511 169275806 -83980777 + AluY SINE Alu 2 296 -15 290 51 76 13 chr2 169275806 169275885 -83980698 + (TA)n Simple_repeat Simple_repeat 1 84 0 443 380 44 0 chr2 169278128 169278286 -83978297 + L2 LINE L2 3107 3271 -1 180 209 70 0 chr2 169278353 169278396 -83978187 - MIR SINE MIR -54 208 163 438 333 72 36 chr2 169278403 169278625 -83977958 + MLT1K LTR MaLR 2 231 -357 2063 108 0 11 chr2 169278638 169278916 -83977667 + AluSx SINE Alu 27 301 -11 307 224 85 30 chr2 169279010 169279168 -83977415 + MLT1K LTR MaLR 421 558 -30 245 330 12 18 chr2 169279175 169279283 -83977300 - MIR SINE MIR -31 177 71 1514 300 65 2 chr2 169280531 169281005 -83975578 + LTR33 LTR ERVL 2 505 -16 26 50 0 0 chr2 169281640 169281680 -83974903 + AT_rich Low_complexity Low_complexity 1 40 0 1497 195 23 64 chr2 169282988 169283378 -83973205 + MLT1A2 LTR MaLR 1 374 0 29 0 0 0 chr2 169283478 169283507 -83973076 + AT_rich Low_complexity Low_complexity 1 29 0 1459 272 129 26 chr2 169283733 169284665 -83971918 + L2 LINE L2 2289 3313 0 297 0 0 0 chr2 169284750 169284783 -83971800 + (TA)n Simple_repeat Simple_repeat 2 34 0 23 68 0 0 chr2 169285478 169285522 -83971061 + AT_rich Low_complexity Low_complexity 1 44 0 1299 236 48 27 chr2 169285763 169286094 -83970489 - LTR40a LTR ERVL 0 519 182 238 257 0 43 chr2 169286075 169286145 -83970438 - LTR40b LTR ERVL -394 68 2 * 535 184 127 38 chr2 169286863 169287021 -83969562 - MER53 DNA DNA -5 184 13 270 223 107 0 chr2 169288425 169288528 -83968055 + Charlie7 DNA MER1_type 48 161 -2451 429 36 0 0 chr2 169288576 169288631 -83967952 + (TGG)n Simple_repeat Simple_repeat 1 55 0 352 182 15 0 chr2 169288641 169288707 -83967876 + Charlie2a DNA MER1_type 77 143 -2639 1137 242 136 25 chr2 169288813 169289329 -83967254 + Charlie2a DNA MER1_type 328 900 -1962 384 203 99 35 chr2 169289457 169289659 -83966924 + Charlie2a DNA MER1_type 2234 2448 -414 450 287 69 40 chr2 169289871 169290137 -83966446 + MLT1H1 LTR MaLR 2 317 -232 484 248 293 9 chr2 169290144 169290479 -83966104 - Charlie7 DNA MER1_type -1967 645 216 609 199 26 7 chr2 169290498 169290649 -83965934 - Charlie2 DNA MER1_type -6 2856 2703 21 0 0 0 chr2 169291991 169292012 -83964571 + AT_rich Low_complexity Low_complexity 1 21 0 237 236 38 66 chr2 169292365 169292471 -83964112 + L1M4 LINE L1 4518 4620 -1526 34 42 0 0 chr2 169292536 169292584 -83963999 + AT_rich Low_complexity Low_complexity 1 48 0 437 256 69 96 chr2 169293572 169293978 -83962605 + MLT1J LTR MaLR 112 506 -5 4089 246 218 31 chr2 169295979 169296670 -83959913 - HAL1 LINE L1 -8 2499 1939 2202 112 0 0 chr2 169296670 169296966 -83959617 + AluSc SINE Alu 1 296 -13 4089 246 218 31 chr2 169296966 169298344 -83958239 - HAL1 LINE L1 -568 1939 42 347 368 97 16 chr2 169299272 169299519 -83957064 + L2 LINE L2 2594 2860 -454 21 36 0 0 chr2 169301363 169301391 -83955192 + AT_rich Low_complexity Low_complexity 1 28 0 248 247 57 32 chr2 169301772 169301930 -83954653 + Charlie7 DNA MER1_type 2449 2610 -2 24 67 0 0 chr2 169304325 169304370 -83952213 + AT_rich Low_complexity Low_complexity 1 45 0 333 246 162 14 chr2 169305596 169305738 -83950845 - MER103 DNA DNA -2 164 2 626 240 130 19 chr2 169311271 169311479 -83945104 - MIR SINE MIR -9 253 23 940 189 11 21 chr2 169311493 169311683 -83944900 - MER5A DNA MER1_type -1 188 1 24 32 0 0 chr2 169311958 169311989 -83944594 + AT_rich Low_complexity Low_complexity 1 31 0 1101 205 5 9 chr2 169314248 169314463 -83942120 - AluJb SINE Alu -13 299 86 26 0 0 0 chr2 169315052 169315078 -83941505 + AT_rich Low_complexity Low_complexity 1 26 0 25 0 0 0 chr2 169315820 169315845 -83940738 + AT_rich Low_complexity Low_complexity 1 25 0 519 275 28 22 chr2 169316744 169316926 -83939657 - MER5A DNA MER1_type -5 184 2 196 341 22 22 chr2 169318522 169318613 -83937970 + L2 LINE L2 3001 3091 -181 1413 156 138 25 chr2 169319128 169319403 -83937180 + AluJb SINE Alu 1 306 -6 2196 98 3 0 chr2 169319847 169320144 -83936439 - AluSg1 SINE Alu -11 298 1 454 253 193 7 chr2 169320144 169320294 -83936289 + MER5A DNA MER1_type 12 189 0 2405 142 42 9 chr2 169320821 169321252 -83935331 - MER65A LTR ERV1 0 445 1 223 342 135 30 chr2 169324505 169324771 -83931812 + L3b LINE CR1 1145 1438 -145 21 89 0 0 chr2 169326442 169326498 -83930085 + AT_rich Low_complexity Low_complexity 1 56 0 452 264 74 25 chr2 169327288 169327451 -83929132 - MIR SINE MIR -50 212 42 180 0 0 0 chr2 169327653 169327673 -83928910 + (TAAAAA)n Simple_repeat Simple_repeat 4 23 0 23 33 0 0 chr2 169329404 169329434 -83927149 + AT_rich Low_complexity Low_complexity 1 30 0 26 64 0 0 chr2 169331642 169331689 -83924894 + AT_rich Low_complexity Low_complexity 1 47 0 1306 157 66 7 chr2 169331698 169331835 -83924748 + L1MA9 LINE L1 6009 6136 -176 198 71 0 0 chr2 169331835 169331863 -83924720 + (CA)n Simple_repeat Simple_repeat 1 28 0 1306 157 66 7 chr2 169331863 169332011 -83924572 + L1MA9 LINE L1 6136 6311 -1 208 28 83 0 chr2 169332612 169332648 -83923935 + T-rich Low_complexity Low_complexity 2 40 0 317 221 30 92 chr2 169333668 169333799 -83922784 - L1MC4 LINE L1 -1306 6736 6614 452 318 71 52 chr2 169335162 169335414 -83921169 + L3b LINE CR1 1170 1426 -157 276 100 0 0 chr2 169335756 169335796 -83920787 + (TG)n Simple_repeat Simple_repeat 2 41 0 227 336 175 49 chr2 169336036 169336179 -83920404 - L2 LINE L2 -2 3270 3110 1198 302 66 59 chr2 169336318 169337163 -83919420 - L2 LINE L2 -559 2755 1905 2099 191 21 23 chr2 169338308 169338743 -83917840 + Tigger2a DNA MER2_type 1 434 0 559 281 20 81 chr2 169341174 169341420 -83915163 - MIR SINE MIR 0 262 32 26 50 0 0 chr2 169342393 169342433 -83914150 + AT_rich Low_complexity Low_complexity 1 40 0 200 279 73 0 chr2 169342471 169342539 -83914044 - L2 LINE L2 -38 3275 3203 214 0 81 27 chr2 169342809 169342846 -83913737 + T-rich Low_complexity Low_complexity 2 40 0 1445 51 0 0 chr2 169342860 169343036 -83913547 - L1PA5 LINE L1 -6 6148 5973 238 241 172 11 chr2 169345277 169345364 -83911219 + MIR SINE MIR 45 145 -63 210 118 0 0 chr2 169346268 169346302 -83910281 + (TG)n Simple_repeat Simple_repeat 1 34 0 528 308 50 22 chr2 169346398 169346580 -83910003 + MIR SINE MIR 26 212 -50 310 214 10 143 chr2 169347841 169347884 -83908699 - L2 LINE L2 -2 3311 3287 2332 150 65 0 chr2 169347884 169348285 -83908298 + MSTA LTR MaLR 2 428 0 310 214 10 143 chr2 169348285 169348339 -83908244 - L2 LINE L2 -26 3287 3227 181 236 200 0 chr2 169351243 169351298 -83905285 + L3b LINE CR1 1479 1544 -39 478 306 106 26 chr2 169352376 169352867 -83903716 + L1MC/D LINE L1 2921 3450 -2696 5541 183 14 18 chr2 169353057 169355106 -83901477 + L1PA16 LINE L1 4126 6166 0 52 69 0 0 chr2 169355194 169355295 -83901288 + AT_rich Low_complexity Low_complexity 1 101 0 214 218 13 51 chr2 169355431 169355509 -83901074 + (CAAAT)n Simple_repeat Simple_repeat 5 79 0 190 238 426 8 chr2 169355810 169355932 -83900651 - MER5B DNA MER1_type 0 178 6 306 371 30 20 chr2 169356492 169356612 -83899971 + L1MC/D LINE L1 4648 4765 -1381 1919 141 10 0 chr2 169356612 169356909 -83899674 - AluSq SINE Alu -13 300 1 306 371 30 20 chr2 169356909 169357087 -83899496 + L1MC/D LINE L1 4765 4949 -1197 557 360 41 0 chr2 169357563 169357855 -83898728 + L1MC/D LINE L1 5451 5754 -2054 21 82 0 0 chr2 169357905 169357954 -83898629 + AT_rich Low_complexity Low_complexity 1 49 0 223 229 0 33 chr2 169358088 169358149 -83898434 + (TATATG)n Simple_repeat Simple_repeat 2 60 0 1174 197 29 35 chr2 169358316 169358631 -83897952 + LTR56 LTR ERV1 1 313 -132 232 170 0 0 chr2 169358631 169358678 -83897905 + A-rich Low_complexity Low_complexity 1 47 0 401 167 60 12 chr2 169358717 169358801 -83897782 + LTR23 LTR ERV1 350 437 0 27 29 0 0 chr2 169359161 169359195 -83897388 + AT_rich Low_complexity Low_complexity 1 34 0 1925 122 56 0 chr2 169359591 169359878 -83896705 + AluSg SINE Alu 1 303 -7 207 0 0 0 chr2 169362757 169362780 -83893803 + (A)n Simple_repeat Simple_repeat 1 23 0 292 219 188 21 chr2 169362963 169363059 -83893524 - MIR SINE MIR -76 132 21 2069 132 3 0 chr2 169363577 169363881 -83892702 + AluSx SINE Alu 1 305 -7 1368 173 155 82 chr2 169368347 169368832 -83887751 + MLT2B1 LTR ERVL 1 520 0 1995 148 0 0 chr2 169369414 169369718 -83886865 + AluJb SINE Alu 1 304 -8 3721 187 47 19 chr2 169370203 169371211 -83885372 - L1ME2 LINE L1 -9 6224 5191 2780 248 115 52 chr2 169371214 169373343 -83883240 - L1ME2 LINE L1 -2687 3528 1085 1271 329 60 25 chr2 169373381 169374222 -83882361 - L1ME2 LINE L1 -5491 905 36 34 55 0 0 chr2 169374333 169374388 -83882195 + AT_rich Low_complexity Low_complexity 1 55 0 234 91 0 0 chr2 169375296 169375329 -83881254 + (GGAA)n Simple_repeat Simple_repeat 3 35 0 4990 204 36 2 chr2 169376086 169377184 -83879399 + L1PA16 LINE L1 3928 5063 -1083 4215 129 1 30 chr2 169377188 169377877 -83878706 + L1PA16 LINE L1 5489 6157 -9 252 143 0 0 chr2 169378185 169378227 -83878356 + (TA)n Simple_repeat Simple_repeat 2 43 0 254 295 76 19 chr2 169379369 169379474 -83877109 - L2 LINE L2 0 3272 3162 294 241 50 122 chr2 169379484 169379746 -83876837 - L2 LINE L2 -83 3230 2988 1698 167 3 40 chr2 169380311 169380611 -83875972 + AluJo SINE Alu 2 290 -22 285 224 86 115 chr2 169380993 169381167 -83875416 + MIR SINE MIR 7 175 -87 25 0 0 0 chr2 169383306 169383331 -83873252 + AT_rich Low_complexity Low_complexity 1 25 0 35 98 0 0 chr2 169383554 169383666 -83872917 + AT_rich Low_complexity Low_complexity 1 112 0 295 339 60 60 chr2 169384150 169384333 -83872250 - L3b LINE CR1 -118 1465 1283 2513 47 0 31 chr2 169385487 169385808 -83870775 - AluY SINE Alu 0 311 1 1705 159 14 3 chr2 169386059 169386342 -83870241 + AluJb SINE Alu 1 286 -26 204 184 0 0 chr2 169386396 169386445 -83870138 + (TTTA)n Simple_repeat Simple_repeat 1 49 0 596 290 85 104 chr2 169386775 169387817 -83868766 + L2 LINE L2 2292 3312 -1 202 283 19 19 chr2 169387922 169387975 -83868608 + L3b LINE CR1 1517 1569 -14 252 139 0 0 chr2 169388425 169388468 -83868115 - MIR SINE MIR -102 160 118 24 32 0 0 chr2 169390359 169390390 -83866193 + AT_rich Low_complexity Low_complexity 1 31 0 202 321 58 88 chr2 169392251 169392662 -83863921 - L2 LINE L2 -47 3225 2827 1879 195 43 37 chr2 169392882 169393344 -83863239 + MLT1C LTR MaLR 3 467 0 230 271 0 0 chr2 169393422 169393481 -83863102 - MER116 DNA Mariner -21 59 1 1213 266 71 99 chr2 169394890 169395423 -83861160 - MLT1H1 LTR MaLR 0 555 38 568 231 33 47 chr2 169395499 169395711 -83860872 + L1MC5 LINE L1 7653 7861 -100 24 53 0 0 chr2 169395716 169395754 -83860829 + AT_rich Low_complexity Low_complexity 1 38 0 19305 113 12 24 chr2 169396422 169400357 -83856226 - L1PA8 LINE L1 0 6172 2280 23 33 0 0 chr2 169401479 169401509 -83855074 + AT_rich Low_complexity Low_complexity 1 30 0 294 29 0 0 chr2 169401582 169401617 -83854966 + (TG)n Simple_repeat Simple_repeat 2 36 0 1189 170 5 15 chr2 169402290 169402530 -83854053 + AluJb SINE Alu 87 324 0 228 179 51 0 chr2 169402697 169402736 -83853847 + L2 LINE L2 3196 3236 -36 275 224 0 0 chr2 169402928 169402986 -83853597 + MLT1J1 LTR MaLR 63 120 -326 2305 100 0 3 chr2 169403296 169403606 -83852977 + AluSc SINE Alu 1 309 0 1172 256 30 13 chr2 169403973 169404274 -83852309 + MLT1C LTR MaLR 162 467 0 369 296 57 61 chr2 169404709 169404939 -83851644 + MIR SINE MIR 33 261 -1 336 94 0 0 chr2 169405991 169406044 -83850539 + (GA)n Simple_repeat Simple_repeat 1 53 0 714 128 0 0 chr2 169406270 169406387 -83850196 + L1MA7 LINE L1 6175 6291 0 184 222 16 16 chr2 169406800 169406863 -83849720 + CT-rich Low_complexity Low_complexity 4 66 0 207 191 0 0 chr2 169407261 169407308 -83849275 + A-rich Low_complexity Low_complexity 1 47 0 292 293 0 24 chr2 169408688 169408770 -83847813 + MIR3 SINE MIR 123 202 -6 1797 136 36 19 chr2 169409731 169410062 -83846521 - THE1C LTR MaLR 0 375 1 2028 183 58 5 chr2 169410760 169411170 -83845413 + MSTB1 LTR MaLR 1 432 0 1686 201 84 3 chr2 169411213 169411546 -83845037 - MLT1A1 LTR MaLR -3 362 3 2106 105 0 81 chr2 169411995 169412329 -83844254 - AluY SINE Alu -4 307 1 1436 213 49 17 chr2 169412337 169412624 -83843959 - AluJo SINE Alu -6 296 1 292 302 69 57 chr2 169413090 169413155 -83843428 - MER5A DNA MER1_type -2 187 124 10743 36 1 130 chr2 169413155 169414747 -83841836 + SVA Other Other 1 1386 0 292 302 69 57 chr2 169414747 169414840 -83841743 - MER5A DNA MER1_type -65 124 27 299 305 0 0 chr2 169414843 169414925 -83841658 + (TG)n Simple_repeat Simple_repeat 1 82 0 7780 43 20 2 chr2 169415006 169416718 -83839865 + L1PA5 LINE L1 4426 6154 0 316 243 132 59 chr2 169417081 169417217 -83839366 - L2 LINE L2 0 3313 3168 875 319 8 0 chr2 169417500 169417760 -83838823 - MIR SINE MIR 0 262 1 293 317 55 48 chr2 169417832 169417977 -83838606 - L2 LINE L2 -588 2726 2581 733 219 123 68 chr2 169417978 169418335 -83838248 + MLT1F1 LTR MaLR 32 409 -158 276 248 80 80 chr2 169418302 169418439 -83838144 + MLT1F1 LTR MaLR 142 278 -289 * 657 255 10 10 chr2 169418436 169418610 -83837973 + MLT1F1 LTR MaLR 419 564 -3 411 113 0 0 chr2 169421295 169421357 -83835226 + (TCCA)n Simple_repeat Simple_repeat 1 62 0 344 275 101 50 chr2 169421370 169421588 -83834995 - L2 LINE L2 -56 3257 3029 381 43 0 0 chr2 169423140 169423187 -83833396 + (TG)n Simple_repeat Simple_repeat 2 48 0 188 200 89 0 chr2 169425139 169425184 -83831399 + L2 LINE L2 3265 3313 0 400 18 35 0 chr2 169425432 169425489 -83831094 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 186 43 0 0 chr2 169425512 169425535 -83831048 + (CAT)n Simple_repeat Simple_repeat 3 25 0 261 366 10 10 chr2 169427459 169427560 -83829023 + MIR3 SINE MIR 12 112 -96 324 64 0 0 chr2 169427703 169427750 -83828833 + (CA)n Simple_repeat Simple_repeat 2 48 0 2361 138 43 17 chr2 169428086 169428507 -83828076 + MSTB1 LTR MaLR 1 432 0 255 266 21 11 chr2 169430297 169430391 -83826192 + MER103 DNA DNA 2 96 -70 208 268 0 0 chr2 169431033 169431074 -83825509 + L3 LINE CR1 1530 1570 -7 1370 203 102 42 chr2 169431853 169432331 -83824252 + MER84 LTR ERV1 1 507 0 1449 126 36 0 chr2 169432754 169432976 -83823607 + MER30 DNA MER1_type 1 230 0 1785 176 28 17 chr2 169433550 169433991 -83822592 + MER61D LTR ERV1 2 501 0 341 246 115 46 chr2 169434102 169434232 -83822351 + MER61D-int LTR ERV1 113 251 -6840 * 1437 234 58 81 chr2 169434228 169434947 -83821636 + MER61D-int LTR ERV1 224 887 -2331 12754 170 29 46 chr2 169434950 169439722 -83816861 + HUERS-P3b LTR ERV1 609 6994 -2 1876 160 24 21 chr2 169439725 169440160 -83816423 + MER61D LTR ERV1 1 501 0 561 191 0 0 chr2 169440419 169440508 -83816075 + 5S rRNA rRNA 2 90 -31 574 294 50 28 chr2 169441115 169441333 -83815250 + MIR SINE MIR 32 254 -8 182 374 206 14 chr2 169441460 169441679 -83814904 - L3b LINE CR1 -197 1386 1126 333 0 0 0 chr2 169441799 169441836 -83814747 + (TTTAA)n Simple_repeat Simple_repeat 5 41 0 337 193 0 126 chr2 169442384 169442503 -83814080 + MLT1K LTR MaLR 485 588 0 199 241 130 0 chr2 169443531 169443585 -83812998 + L2 LINE L2 3210 3270 -43 333 128 84 11 chr2 169443587 169443868 -83812715 + (TA)n Simple_repeat Simple_repeat 1 301 0 218 160 20 0 chr2 169443889 169443939 -83812644 + (TGAA)n Simple_repeat Simple_repeat 1 51 0 191 355 50 28 chr2 169444677 169444818 -83811765 + L2 LINE L2 2578 2721 -593 1822 199 14 19 chr2 169444986 169445348 -83811235 - MLT1A1 LTR MaLR -2 363 4 21 82 0 0 chr2 169445348 169445397 -83811186 + AT_rich Low_complexity Low_complexity 1 49 0 242 269 51 26 chr2 169445693 169445771 -83810812 - L2 LINE L2 0 3272 3193 648 303 23 34 chr2 169446347 169446611 -83809972 + Charlie8 DNA MER1_type 3 263 -2154 1059 246 201 29 chr2 169450302 169450721 -83805862 + MER20B DNA MER1_type 3 493 -290 21 0 0 0 chr2 169450829 169450850 -83805733 + AT_rich Low_complexity Low_complexity 1 21 0 936 200 94 0 chr2 169451456 169451691 -83804892 + MER20B DNA MER1_type 527 783 0 187 286 0 18 chr2 169452104 169452160 -83804423 - MIR SINE MIR -96 166 112 201 316 25 0 chr2 169453832 169453911 -83802672 + L3b LINE CR1 1285 1365 -218 195 42 0 0 chr2 169454963 169454987 -83801596 + (A)n Simple_repeat Simple_repeat 1 24 0 680 155 0 8 chr2 169456624 169456753 -83799830 + CT-rich Low_complexity Low_complexity 1 128 0 1338 95 0 2 chr2 169456646 169457005 -83799578 + (TTCC)n Simple_repeat Simple_repeat 1 358 0 449 250 32 0 chr2 169457005 169457129 -83799454 - FLAM_A SINE Alu -5 128 1 1196 205 80 0 chr2 169457979 169458267 -83798316 + MER5C DNA MER1_type 11 321 -3 229 353 39 10 chr2 169459576 169459678 -83796905 - L2 LINE L2 -13 3259 3155 658 261 21 64 chr2 169460289 169460523 -83796060 + MIR SINE MIR 29 252 -10 201 171 0 0 chr2 169462273 169462308 -83794275 + T-rich Low_complexity Low_complexity 1 35 0 34 55 0 0 chr2 169462405 169462460 -83794123 + AT_rich Low_complexity Low_complexity 1 55 0 386 262 63 49 chr2 169462463 169462705 -83793878 + L1ME LINE L1 5386 5635 -535 561 345 67 58 chr2 169463345 169463927 -83792656 + L2 LINE L2 2091 2677 -637 22 35 0 0 chr2 169463927 169463956 -83792627 + AT_rich Low_complexity Low_complexity 1 29 0 1379 209 3 33 chr2 169463964 169464265 -83792318 + AluJo SINE Alu 5 296 -16 187 327 39 52 chr2 169464575 169464728 -83791855 + L2 LINE L2 3123 3273 -40 1624 178 12 15 chr2 169465103 169465446 -83791137 - L1MA4 LINE L1 -9 6291 5950 252 86 0 0 chr2 169467015 169467050 -83789533 + (TC)n Simple_repeat Simple_repeat 2 36 0 403 312 142 27 chr2 169467558 169467968 -83788615 - LTR16A1 LTR ERVL 0 457 1 7428 91 6 23 chr2 169469454 169470543 -83786040 - MER11C LTR ERVK 0 1071 1 599 232 107 0 chr2 169471393 169471561 -83785022 - MER5A DNA MER1_type -3 186 1 309 337 105 57 chr2 169472062 169472873 -83783710 - L2 LINE L2 -462 2852 2003 23 54 0 0 chr2 169473028 169473065 -83783518 + AT_rich Low_complexity Low_complexity 1 37 0 198 0 0 0 chr2 169473955 169473977 -83782606 + (CA)n Simple_repeat Simple_repeat 1 22 0 477 328 15 18 chr2 169475909 169476151 -83780432 + HAL1b LINE L1 382 1715 -758 226 57 29 0 chr2 169476493 169476528 -83780055 - MADE1 DNA Mariner 0 80 45 331 321 48 71 chr2 169476887 169477283 -83779300 + L1MC/D LINE L1 2223 2609 -3537 986 325 105 30 chr2 169477345 169479638 -83776945 + L1MC/D LINE L1 2678 5141 -1005 1288 246 86 34 chr2 169479765 169480209 -83776374 + L1MC/D LINE L1 5321 5787 -2021 1473 84 44 22 chr2 169481597 169481822 -83774761 - MER30 DNA MER1_type 0 230 1 1767 265 84 46 chr2 169484049 169484898 -83771685 - L2 LINE L2 -392 2922 2035 3085 108 9 0 chr2 169484898 169485350 -83771233 + L1PA11 LINE L1 5717 6172 -2 1767 265 84 46 chr2 169485350 169485408 -83771175 - L2 LINE L2 -1279 2035 1981 5730 39 0 0 chr2 169485737 169486424 -83770159 - L1PA3 LINE L1 -5 6150 5464 264 59 0 0 chr2 169486753 169486787 -83769796 + (CA)n Simple_repeat Simple_repeat 1 34 0 553 269 19 66 chr2 169487155 169487367 -83769216 + MIR SINE MIR 60 261 -1 384 223 100 31 chr2 169487847 169487977 -83768606 - MIR SINE MIR -8 254 116 321 330 17 0 chr2 169488681 169488799 -83767784 - MER103 DNA DNA -43 123 4 1531 154 26 48 chr2 169490432 169490743 -83765840 - THE1C LTR MaLR 0 375 72 785 293 9 14 chr2 169490959 169491181 -83765402 - MIR SINE MIR -1 261 41 707 285 81 29 chr2 169492129 169492375 -83764208 + MIR SINE MIR 4 262 0 704 305 144 30 chr2 169493755 169494221 -83762362 + LTR33 LTR ERVL 3 521 0 279 0 0 0 chr2 169494370 169494401 -83762182 + (TAA)n Simple_repeat Simple_repeat 3 33 0 196 266 77 89 chr2 169495614 169495783 -83760800 - MIR SINE MIR -93 169 3 1070 253 113 51 chr2 169495954 169496467 -83760116 + MLT1E3 LTR MaLR 7 551 -73 6398 182 20 7 chr2 169496569 169497892 -83758691 - L1 LINE L1 -747 5399 4059 2159 84 7 0 chr2 169498321 169498607 -83757976 + AluY SINE Alu 24 311 0 25 31 0 0 chr2 169500310 169500342 -83756241 + AT_rich Low_complexity Low_complexity 1 32 0 630 275 48 39 chr2 169500419 169500626 -83755957 - MIR SINE MIR 0 262 54 839 284 90 78 chr2 169501187 169501775 -83754808 - MLT1G1 LTR MaLR 0 595 1 185 333 0 23 chr2 169502487 169502574 -83754009 - L2 LINE L2 -316 2956 2872 21 82 0 0 chr2 169503609 169503658 -83752925 + AT_rich Low_complexity Low_complexity 1 49 0 2060 109 0 48 chr2 169504043 169504354 -83752229 - AluSg SINE Alu -14 296 1 234 339 48 4 chr2 169504423 169504650 -83751933 - L1ME LINE L1 -249 5872 5636 28 29 0 0 chr2 169505362 169505397 -83751186 + AT_rich Low_complexity Low_complexity 1 35 0 360 368 112 21 chr2 169506745 169507030 -83749553 - L2 LINE L2 -830 2484 2174 27 0 0 0 chr2 169507071 169507098 -83749485 + AT_rich Low_complexity Low_complexity 1 27 0 479 219 42 0 chr2 169507813 169507909 -83748674 - AluJo SINE Alu -101 211 112 30 0 0 0 chr2 169508123 169508153 -83748430 + AT_rich Low_complexity Low_complexity 1 30 0 306 50 0 0 chr2 169508514 169508554 -83748029 + (TCC)n Simple_repeat Simple_repeat 2 41 0 482 303 131 17 chr2 169508713 169509043 -83747540 - L2 LINE L2 -157 3156 2779 243 0 0 0 chr2 169510022 169510049 -83746534 + (A)n Simple_repeat Simple_repeat 1 27 0 217 283 22 98 chr2 169510411 169510456 -83746127 - MIR3 SINE MIR -11 197 161 334 286 112 6 chr2 169510456 169510634 -83745949 - MER117 DNA MER1_type 0 197 1 217 283 22 98 chr2 169510634 169510680 -83745903 - MIR3 SINE MIR -47 161 113 243 0 0 0 chr2 169511237 169511264 -83745319 + (A)n Simple_repeat Simple_repeat 1 27 0 228 304 0 76 chr2 169511625 169511670 -83744913 - MIR3 SINE MIR -11 197 161 334 286 112 6 chr2 169511670 169511848 -83744735 - MER117 DNA MER1_type 0 197 1 228 304 0 76 chr2 169511848 169511894 -83744689 - MIR3 SINE MIR -47 161 113 271 340 94 21 chr2 169512481 169512672 -83743911 + L3 LINE CR1 601 805 -772 191 158 0 26 chr2 169512751 169512789 -83743794 - L3 LINE CR1 -1238 339 303 755 122 0 32 chr2 169513425 169513548 -83743035 - AluSx SINE Alu 0 312 194 1176 78 0 0 chr2 169513549 169513690 -83742893 - AluSx SINE Alu -172 141 1 3969 152 27 24 chr2 169514822 169515571 -83741012 - L1MA7 LINE L1 -2 6289 5539 253 302 16 0 chr2 169515795 169515858 -83740725 - MIR3 SINE MIR -5 203 140 280 217 29 14 chr2 169516416 169516485 -83740098 + LTR37B LTR ERV1 13 82 -386 522 333 31 12 chr2 169518322 169518580 -83738003 + L1MEd LINE L1 4 266 -5853 239 268 18 0 chr2 169518603 169518659 -83737924 + L1MEd LINE L1 328 384 -5735 356 302 29 36 chr2 169518749 169518888 -83737695 + L1MEd LINE L1 483 620 -5499 348 325 58 38 chr2 169519105 169519666 -83736917 + L1MEd LINE L1 911 1575 -915 387 323 30 0 chr2 169520271 169520449 -83736134 + L1ME3A LINE L1 5480 5664 -506 564 233 33 0 chr2 169520550 169520670 -83735913 - MER5C DNA MER1_type -200 124 1 401 263 28 78 chr2 169520688 169520905 -83735678 + L1ME3A LINE L1 5665 5870 -300 258 73 36 18 chr2 169520974 169521029 -83735554 + (TA)n Simple_repeat Simple_repeat 2 57 0 507 299 46 17 chr2 169522698 169522872 -83733711 + MIR3 SINE MIR 7 185 -23 2579 46 0 0 chr2 169523497 169523800 -83732783 + AluY SINE Alu 1 303 -8 21 71 0 0 chr2 169524289 169524331 -83732252 + AT_rich Low_complexity Low_complexity 1 42 0 21 57 0 0 chr2 169526117 169526152 -83730431 + AT_rich Low_complexity Low_complexity 1 35 0 214 279 15 7 chr2 169526445 169526581 -83730002 + (TA)n Simple_repeat Simple_repeat 1 137 0 197 250 0 0 chr2 169526593 169526633 -83729950 + MIR3 SINE MIR 142 181 -27 435 233 78 0 chr2 169527191 169527294 -83729289 + MER94 DNA DNA 20 130 -4 225 0 0 0 chr2 169527554 169527579 -83729004 + (T)n Simple_repeat Simple_repeat 1 25 0 567 135 67 122 chr2 169528053 169528264 -83728319 + THE1C LTR MaLR 208 428 0 1078 226 8 12 chr2 169528264 169528375 -83728208 - L1 LINE L1 -2291 3855 3745 1710 183 45 15 chr2 169528375 169528708 -83727875 + MER2 DNA MER2_type 2 344 0 1078 226 8 12 chr2 169528708 169528853 -83727730 - L1 LINE L1 -2401 3745 3600 441 181 138 0 chr2 169529395 169529489 -83727094 - MER46A DNA MER2_type -129 107 1 205 97 0 0 chr2 169529950 169529981 -83726602 - MIR SINE MIR -108 154 124 490 266 88 57 chr2 169530040 169530232 -83726351 + MER58C DNA MER1_type 1 198 -17 21 36 0 0 chr2 169530530 169530558 -83726025 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr2 169531529 169531560 -83725023 + AT_rich Low_complexity Low_complexity 1 31 0 790 315 134 38 chr2 169531885 169532701 -83723882 - L2 LINE L2 -12 3301 2420 1627 114 38 0 chr2 169534408 169534672 -83721911 + L1MA5A LINE L1 6024 6297 0 21 0 0 0 chr2 169535733 169535754 -83720829 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr2 169536421 169536456 -83720127 + AT_rich Low_complexity Low_complexity 1 35 0 1011 224 88 81 chr2 169536642 169537187 -83719396 - MLT1H LTR MaLR 0 549 1 21 57 0 0 chr2 169537261 169537296 -83719287 + AT_rich Low_complexity Low_complexity 1 35 0 23 54 0 0 chr2 169537398 169537435 -83719148 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr2 169538408 169538431 -83718152 + AT_rich Low_complexity Low_complexity 1 23 0 410 252 10 47 chr2 169539123 169539323 -83717260 + MER46C DNA MER2_type 93 336 -2 292 290 161 0 chr2 169540343 169540467 -83716116 - MIR3 SINE MIR -35 173 30 180 216 0 0 chr2 169542626 169542677 -83713906 + (AATTG)n Simple_repeat Simple_repeat 3 53 0 22 0 0 0 chr2 169544876 169544898 -83711685 + AT_rich Low_complexity Low_complexity 1 22 0 499 319 14 7 chr2 169545146 169545287 -83711296 + MIR SINE MIR 12 153 -109 21 0 0 0 chr2 169545314 169545335 -83711248 + AT_rich Low_complexity Low_complexity 1 21 0 1033 30 8 8 chr2 169545790 169545924 -83710659 + (TAGA)n Simple_repeat Simple_repeat 4 137 0 1655 168 10 45 chr2 169545987 169546318 -83710265 + AluJo SINE Alu 1 312 0 296 290 93 0 chr2 169546832 169546939 -83709644 - MIR SINE MIR -55 153 37 13240 31 1 0 chr2 169550139 169552495 -83704088 - L1PA3 LINE L1 0 6155 3805 14752 33 0 4 chr2 169552495 169554330 -83702253 + L1PA3 LINE L1 1971 3797 -2349 1794 178 51 18 chr2 169554703 169554881 -83701702 - MER7A DNA MER2_type -2692 346 152 2158 119 38 24 chr2 169554881 169555251 -83701332 + THE1C LTR MaLR 1 375 0 1794 178 51 18 chr2 169555251 169555404 -83701179 - MER7A DNA MER2_type -2886 152 6 436 223 154 23 chr2 169555478 169555608 -83700975 - L2 LINE L2 -6 3307 3161 190 304 141 11 chr2 169556481 169556573 -83700010 + L2 LINE L2 3193 3296 -17 300 296 156 34 chr2 169557231 169557410 -83699173 - MIR SINE MIR -50 212 12 24 0 0 0 chr2 169558983 169559007 -83697576 + AT_rich Low_complexity Low_complexity 1 24 0 3768 64 2 0 chr2 169560986 169561471 -83695112 - L1PA7 LINE L1 -3 6151 5666 2975 49 3 0 chr2 169561471 169561839 -83694744 + L1PA7 LINE L1 5312 5680 -474 228 299 13 13 chr2 169563937 169564014 -83692569 + MIR3 SINE MIR 91 167 -41 2225 59 31 7 chr2 169564120 169564407 -83692176 - AluY SINE Alu -1 310 17 375 257 79 0 chr2 169564697 169564798 -83691785 + MER94 DNA DNA 20 128 -6 216 0 0 0 chr2 169565061 169565085 -83691498 + (T)n Simple_repeat Simple_repeat 1 24 0 190 237 0 0 chr2 169565435 169565473 -83691110 - L2 LINE L2 -8 3305 3268 298 200 0 0 chr2 169567140 169567200 -83689383 - MER116 DNA Mariner -20 60 1 717 286 69 28 chr2 169567378 169567595 -83688988 + MIR SINE MIR 7 232 -30 2342 210 21 31 chr2 169567661 169568207 -83688376 + MER44D DNA MER2_type 1 605 0 2101 126 3 0 chr2 169568697 169568999 -83687584 - AluSp SINE Alu -5 308 6 668 322 21 21 chr2 169569011 169569244 -83687339 + MIR SINE MIR 30 262 0 21 0 0 0 chr2 169569886 169569907 -83686676 + AT_rich Low_complexity Low_complexity 1 21 0 238 259 0 35 chr2 169571515 169571573 -83685010 + 7SK RNA RNA 8 63 -130 2355 118 18 26 chr2 169572250 169572639 -83683944 - L1PA13 LINE L1 0 6163 5778 888 225 24 29 chr2 169573426 169573635 -83682948 - MER63A DNA MER1_type -2 208 1 210 371 28 21 chr2 169573824 169573967 -83682616 - L2 LINE L2 -2493 821 678 387 341 50 48 chr2 169573997 169574355 -83682228 - L2 LINE L2 -954 2360 2002 392 311 101 39 chr2 169575842 169576867 -83679716 + L1M4 LINE L1 4146 5233 -913 257 345 99 21 chr2 169576961 169577152 -83679431 - MIR SINE MIR -12 250 45 271 321 152 31 chr2 169627160 169627591 -83628992 + L2 LINE L2 429 917 -2397 1905 174 0 3 chr2 169627591 169627902 -83628681 - AluJb SINE Alu 0 312 3 271 321 152 31 chr2 169627902 169627918 -83628665 + L2 LINE L2 917 930 -2384 * 685 344 54 32 chr2 169627903 169628536 -83628047 + L2 LINE L2 2661 3312 -1 517 327 93 58 chr2 169628693 169629772 -83626811 + L1MEc LINE L1 184 1300 -4905 308 255 12 0 chr2 169629969 169630061 -83626522 + L1MEc LINE L1 1531 1667 -909 896 181 75 0 chr2 169630212 169630372 -83626211 + MER20 DNA MER1_type 36 207 -12 2288 84 0 3 chr2 169630401 169630709 -83625874 + AluSq SINE Alu 1 307 -6 2073 123 13 3 chr2 169630774 169631082 -83625501 + AluSq SINE Alu 1 311 -2 4555 135 32 30 chr2 169631494 169632311 -83624272 + L1PB4 LINE L1 5328 6149 -7 338 292 50 71 chr2 169632347 169632587 -83623996 + L1ME3A LINE L1 2351 2585 -3630 227 291 0 23 chr2 169632611 169632697 -83623886 + L1ME3A LINE L1 2532 2615 -3600 729 282 44 17 chr2 169632806 169633100 -83623483 + L1ME3A LINE L1 2769 3070 -3145 22 0 0 0 chr2 169633112 169633134 -83623449 + AT_rich Low_complexity Low_complexity 1 22 0 258 291 35 0 chr2 169633244 169633330 -83623253 - MIR SINE MIR -21 241 153 395 306 109 36 chr2 169633519 169633849 -83622734 + L1ME3A LINE L1 3439 3792 -2423 357 263 59 0 chr2 169633884 169634002 -83622581 + L1ME3A LINE L1 3811 3935 -2280 456 346 67 28 chr2 169634076 169634359 -83622224 + MLT1I LTR MaLR 94 387 -22 1084 301 110 36 chr2 169634363 169635644 -83620939 + L1ME3A LINE L1 3944 5319 -896 373 335 45 9 chr2 169635796 169636017 -83620566 + L1ME3A LINE L1 5455 5683 -548 458 293 46 24 chr2 169636021 169636268 -83620315 + L1ME3A LINE L1 5779 6028 -203 238 65 0 0 chr2 169636451 169636482 -83620101 - MER113 DNA MER1_type? -467 54 24 27 49 0 0 chr2 169637557 169637598 -83618985 + AT_rich Low_complexity Low_complexity 1 41 0 1577 244 109 8 chr2 169638026 169638564 -83618019 - L1ME3A LINE L1 -268 5902 5305 244 277 31 0 chr2 169638664 169638729 -83617854 + (TATG)n Simple_repeat Simple_repeat 1 67 0 269 281 8 41 chr2 169641129 169641250 -83615333 - L2 LINE L2 -44 3269 3153 * 356 319 124 0 chr2 169641245 169641414 -83615169 + MIR SINE MIR 10 199 -63 494 243 50 44 chr2 169641903 169642084 -83614499 + L1ME3A LINE L1 6047 6228 -11 243 267 33 22 chr2 169642778 169642868 -83613715 - L2 LINE L2 0 3313 3223 276 53 0 0 chr2 169642988 169643026 -83613557 + (GA)n Simple_repeat Simple_repeat 1 38 0 303 229 114 14 chr2 169643182 169643322 -83613261 + L1ME4a LINE L1 5968 6121 0 22 35 0 0 chr2 169643897 169643926 -83612657 + AT_rich Low_complexity Low_complexity 1 29 0 7051 50 6 0 chr2 169644350 169645937 -83610646 + L1PA7 LINE L1 4562 6150 -4 1412 251 57 26 chr2 169647861 169648284 -83608299 - MER63B DNA MER1_type 0 436 1 183 80 0 0 chr2 169649313 169649338 -83607245 + (T)n Simple_repeat Simple_repeat 1 25 0 282 298 144 43 chr2 169649459 169649667 -83606916 + MIR SINE MIR 34 262 0 1709 122 8 4 chr2 169649723 169649989 -83606594 - AluSq SINE Alu 0 313 47 881 181 4 97 chr2 169650890 169651127 -83605456 - MER20 DNA MER1_type -3 216 2 247 213 40 53 chr2 169651214 169651289 -83605294 - MIR SINE MIR -44 218 145 460 256 8 16 chr2 169651345 169651466 -83605117 - MIR SINE MIR -119 143 24 4267 223 59 28 chr2 169651594 169653391 -83603192 + L1MD1 LINE L1 4044 5925 -317 681 151 0 65 chr2 169653391 169653530 -83603053 + FLAM_C SINE Alu 1 130 -3 4267 223 59 28 chr2 169653530 169653859 -83602724 + L1MD1 LINE L1 5925 6242 0 180 289 39 19 chr2 169654207 169654259 -83602324 - L2 LINE L2 -11 3302 3250 25 0 0 0 chr2 169654280 169654305 -83602278 + AT_rich Low_complexity Low_complexity 1 25 0 200 79 53 0 chr2 169655281 169655319 -83601264 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 2315 88 7 3 chr2 169655491 169655798 -83600785 + AluSc SINE Alu 2 309 0 280 369 121 0 chr2 169656638 169656787 -83599796 - L3b LINE CR1 -308 1275 1109 2103 126 7 0 chr2 169657123 169657409 -83599174 - AluSc SINE Alu -21 288 1 257 236 18 0 chr2 169658422 169658477 -83598106 + MLT1E1 LTR MaLR 92 147 -507 * 2065 252 84 11 chr2 169658447 169658983 -83597600 + MLT1E2 LTR MaLR 52 626 0 2059 159 31 0 chr2 169659425 169659778 -83596805 + THE1B LTR MaLR 1 364 0 1967 151 125 10 chr2 169660058 169660442 -83596141 - MSTA LTR MaLR 0 428 1 304 224 17 0 chr2 169660620 169660678 -83595905 + MER58 DNA MER1_type 1 59 -2361 * 346 179 0 107 chr2 169660677 169660761 -83595822 + MER58 DNA MER1_type 2346 2420 0 210 71 0 0 chr2 169661652 169661680 -83594903 + (GA)n Simple_repeat Simple_repeat 2 29 0 506 294 56 109 chr2 169662457 169662814 -83593769 + L2 LINE L2 2935 3272 0 5789 99 27 0 chr2 169663182 169664029 -83592554 - L1PA14 LINE L1 -9 6152 5283 298 317 41 16 chr2 169664180 169664303 -83592280 + MIR SINE MIR 70 195 -67 1472 146 19 127 chr2 169664325 169664702 -83591881 - MER1B DNA MER1_type -1 336 1 5818 150 63 14 chr2 169665170 169667246 -83589337 + L1MA8 LINE L1 4099 6291 0 441 243 179 21 chr2 169667324 169667464 -83589119 + MIR SINE MIR 18 179 -83 2276 72 3 26 chr2 169667468 169667774 -83588809 + AluSc SINE Alu 1 299 -10 323 272 176 8 chr2 169668819 169668944 -83587639 - MER102a DNA MER1_type 0 330 185 3772 142 57 39 chr2 169668974 169669749 -83586834 - L1MC1 LINE L1 -3 6330 5542 340 216 10 0 chr2 169669767 169669864 -83586719 + L1M4 LINE L1 4978 5075 -1071 1018 240 0 28 chr2 169669873 169670127 -83586456 + MLT1A1 LTR MaLR 10 256 -109 4817 245 32 18 chr2 169670154 169671304 -83585279 - L1MC1 LINE L1 -1195 4951 3820 2180 119 0 3 chr2 169671304 169671606 -83584977 - AluSx SINE Alu -11 301 1 4817 245 32 18 chr2 169671606 169672604 -83583979 - L1MC1 LINE L1 -2326 3820 2614 22 35 0 0 chr2 169672981 169673010 -83583573 + AT_rich Low_complexity Low_complexity 1 29 0 32 26 0 0 chr2 169673842 169673881 -83582702 + AT_rich Low_complexity Low_complexity 1 39 0 2282 100 0 3 chr2 169673945 169674254 -83582329 + AluSg SINE Alu 1 308 -2 376 270 12 68 chr2 169674682 169674845 -83581738 + L2 LINE L2 3160 3313 0 262 313 128 24 chr2 169674858 169675069 -83581514 + MIR SINE MIR 6 238 -24 193 238 0 0 chr2 169675164 169675206 -83581377 + L2 LINE L2 3223 3264 -8 367 345 58 22 chr2 169676407 169676546 -83580037 - MIR SINE MIR -117 145 2 21 57 0 0 chr2 169677961 169677996 -83578587 + AT_rich Low_complexity Low_complexity 1 35 0 279 350 42 63 chr2 169678160 169678491 -83578092 + L2 LINE L2 71 394 -2920 39 50 0 0 chr2 169678652 169678712 -83577871 + AT_rich Low_complexity Low_complexity 1 60 0 3937 88 9 16 chr2 169678852 169679422 -83577161 + L1PA13 LINE L1 5594 6159 -4 1398 126 0 27 chr2 169681150 169681372 -83575211 - AluSc SINE Alu -15 294 79 216 186 23 0 chr2 169681443 169681486 -83575097 + (CA)n Simple_repeat Simple_repeat 2 45 0 282 132 0 0 chr2 169683479 169683532 -83573051 + (TG)n Simple_repeat Simple_repeat 1 53 0 1965 98 3 79 chr2 169683774 169684091 -83572492 - AluSg SINE Alu -17 293 1 1828 238 80 71 chr2 169685571 169686457 -83570126 + L1MC5 LINE L1 6633 7526 -435 23 54 0 0 chr2 169686753 169686790 -83569793 + AT_rich Low_complexity Low_complexity 1 37 0 340 246 23 0 chr2 169687713 169687824 -83568759 + MIR SINE MIR 101 214 -48 826 138 57 16 chr2 169687937 169687968 -83568615 - L1MA7 LINE L1 -202 5952 5924 1771 121 32 13 chr2 169687968 169688282 -83568301 - L1MA8 LINE L1 -2 6289 5970 826 138 57 16 chr2 169688282 169688422 -83568161 - L1MA7 LINE L1 -230 5924 5781 301 132 0 0 chr2 169688540 169688593 -83567990 - L1PA7 LINE L1 -1 6153 6101 186 103 0 0 chr2 169690368 169690397 -83566186 + (TA)n Simple_repeat Simple_repeat 1 29 0 2166 130 0 0 chr2 169690751 169691052 -83565531 + AluSg SINE Alu 1 301 -9 203 354 14 49 chr2 169691733 169691877 -83564706 + L2 LINE L2 2926 3064 -208 310 346 7 46 chr2 169692216 169692369 -83564214 - MIR SINE MIR -67 195 49 513 272 98 11 chr2 169695392 169695576 -83561007 - MIR SINE MIR -18 244 45 23 33 0 0 chr2 169696468 169696498 -83560085 + AT_rich Low_complexity Low_complexity 1 30 0 951 294 87 22 chr2 169696786 169697235 -83559348 + L2 LINE L2 2831 3308 -5 365 259 0 12 chr2 169698128 169698213 -83558370 + MIR SINE MIR 114 197 -65 508 316 53 24 chr2 169699759 169699965 -83556618 - Charlie8 DNA MER1_type -2199 218 7 955 114 0 54 chr2 169702038 169702187 -83554396 - AluSq SINE Alu -103 210 70 29 0 0 0 chr2 169702657 169702686 -83553897 + AT_rich Low_complexity Low_complexity 1 29 0 2205 122 3 0 chr2 169702759 169703071 -83553512 - AluSq SINE Alu 0 313 1 1578 202 43 6 chr2 169703625 169703952 -83552631 - MER58B DNA MER1_type -2 339 1 1940 156 122 8 chr2 169704109 169704493 -83552090 - MSTA LTR MaLR 0 428 1 362 299 29 17 chr2 169704498 169704672 -83551911 + MLT1H LTR MaLR 1 176 -373 795 152 20 0 chr2 169704694 169704845 -83551738 + L1MD1 LINE L1 6089 6242 0 271 276 11 0 chr2 169704879 169704966 -83551617 - L1M4 LINE L1 -1542 4604 4517 288 0 0 0 chr2 169704970 169705002 -83551581 + (TG)n Simple_repeat Simple_repeat 1 32 0 26 30 0 0 chr2 169705039 169705072 -83551511 + AT_rich Low_complexity Low_complexity 1 33 0 427 348 124 0 chr2 169706263 169706441 -83550142 - MIR SINE MIR -50 212 13 390 297 249 0 chr2 169706472 169706765 -83549818 + L2 LINE L2 2841 3206 -107 186 43 0 0 chr2 169706794 169706817 -83549766 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 583 274 62 48 chr2 169707582 169707955 -83548628 - MARNA DNA Mariner -40 546 169 21 36 0 0 chr2 169708897 169708925 -83547658 + AT_rich Low_complexity Low_complexity 1 28 0 186 43 0 0 chr2 169709102 169709125 -83547458 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 216 0 0 0 chr2 169709634 169709658 -83546925 + (A)n Simple_repeat Simple_repeat 1 24 0 * 249 108 0 0 chr2 169709657 169709694 -83546889 + (GA)n Simple_repeat Simple_repeat 2 38 0 3324 223 40 26 chr2 169709778 169710693 -83545890 + MER63C DNA MER1_type 2 929 -1 2141 230 53 65 chr2 169711785 169712700 -83543883 - L1M4c LINE L1 -4516 1787 798 524 177 143 8 chr2 169712701 169712827 -83543756 + L1MB1 LINE L1 5719 5860 -308 1486 164 43 66 chr2 169713534 169713725 -83542858 - MER44D DNA MER2_type -1882 609 415 2601 13 0 7 chr2 169713725 169714023 -83542560 + AluYa5 SINE Alu 1 296 -15 1486 164 43 66 chr2 169714023 169714178 -83542405 - MER44D DNA MER2_type -2076 415 1 186 43 0 0 chr2 169714971 169714994 -83541589 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 553 265 29 25 chr2 169715078 169715282 -83541301 - L1MC5 LINE L1 -48 7913 7709 315 147 147 69 chr2 169715614 169715716 -83540867 - L1MC5 LINE L1 -905 7056 6947 1896 144 0 0 chr2 169715893 169716178 -83540405 - AluSx SINE Alu -27 285 1 718 258 54 74 chr2 169716180 169716557 -83540026 - L1MC5 LINE L1 -884 6924 6542 959 245 120 45 chr2 169716810 169717275 -83539308 - L1ME1 LINE L1 -6 6160 5661 1588 229 86 37 chr2 169717430 169717955 -83538628 - L1ME LINE L1 -468 5698 5113 2178 89 4 0 chr2 169717955 169718256 -83538327 + AluSp SINE Alu 1 302 0 1588 229 86 37 chr2 169718256 169718614 -83537969 - L1ME LINE L1 -1053 5113 4774 1435 46 0 0 chr2 169718622 169718796 -83537787 - AluY SINE Alu -9 302 129 461 225 0 63 chr2 169718810 169718952 -83537631 - L1ME LINE L1 -1388 4758 4626 * 668 245 108 83 chr2 169718947 169719383 -83537200 - L1ME LINE L1 -1819 4327 3881 491 291 97 10 chr2 169719593 169719799 -83536784 + L1ME3 LINE L1 1033 1256 -4863 251 342 8 0 chr2 169720167 169720287 -83536296 + L1ME3 LINE L1 3609 3729 -2400 422 271 119 61 chr2 169720368 169720678 -83535905 + L1ME3 LINE L1 4928 5255 -874 228 136 85 0 chr2 169720679 169720738 -83535845 + (TA)n Simple_repeat Simple_repeat 2 65 0 341 283 62 0 chr2 169720855 169721012 -83535571 + L1ME3 LINE L1 5699 5868 -285 22 0 0 0 chr2 169721034 169721056 -83535527 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr2 169721107 169721137 -83535446 + AT_rich Low_complexity Low_complexity 1 30 0 342 268 21 78 chr2 169722037 169722179 -83534404 + MIR SINE MIR 56 189 -73 414 293 21 0 chr2 169722359 169722499 -83534084 + Charlie8 DNA MER1_type 38 180 -2237 855 311 82 16 chr2 169722773 169723140 -83533443 + MLT1I LTR MaLR 19 409 0 341 293 109 7 chr2 169723350 169723497 -83533086 - MIR SINE MIR -6 256 95 412 277 70 67 chr2 169724587 169724864 -83531719 + LTR8 LTR ERV1 1 283 -444 1005 252 100 55 chr2 169724865 169725334 -83531249 + LTR8A LTR ERV1 113 727 0 2112 120 3 13 chr2 169727242 169727551 -83529032 + AluSx SINE Alu 1 306 -6 198 224 0 0 chr2 169727672 169727721 -83528862 + (TATG)n Simple_repeat Simple_repeat 4 52 0 240 228 5 60 chr2 169730634 169730818 -83525765 + (TAA)n Simple_repeat Simple_repeat 3 176 0 204 240 0 0 chr2 169730891 169730941 -83525642 + (TTATA)n Simple_repeat Simple_repeat 5 54 0 21 36 0 0 chr2 169731716 169731744 -83524839 + AT_rich Low_complexity Low_complexity 1 28 0 31 0 0 0 chr2 169732742 169732773 -83523810 + AT_rich Low_complexity Low_complexity 1 31 0 30 27 0 0 chr2 169733317 169733354 -83523229 + AT_rich Low_complexity Low_complexity 1 37 0 2516 49 0 3 chr2 169734028 169734332 -83522251 - AluY SINE Alu -8 303 1 793 156 25 0 chr2 169738301 169738461 -83518122 + CT-rich Low_complexity Low_complexity 3 166 0 216 240 39 10 chr2 169738573 169738677 -83517906 + CT-rich Low_complexity Low_complexity 3 109 0 532 283 85 94 chr2 169738795 169739124 -83517459 - L2 LINE L2 0 3313 2988 23 0 0 0 chr2 169739797 169739820 -83516763 + AT_rich Low_complexity Low_complexity 1 23 0 31 26 0 0 chr2 169741159 169741197 -83515386 + AT_rich Low_complexity Low_complexity 1 38 0 694 228 88 49 chr2 169741748 169742077 -83514506 + Charlie4a DNA MER1_type 166 507 -1 2092 109 0 7 chr2 169742077 169742491 -83514092 + AluSx SINE Alu 2 413 0 27 0 0 0 chr2 169742814 169742841 -83513742 + AT_rich Low_complexity Low_complexity 1 27 0 33 73 0 0 chr2 169743405 169743473 -83513110 + AT_rich Low_complexity Low_complexity 1 68 0 1936 132 3 14 chr2 169744646 169744957 -83511626 + AluSp SINE Alu 1 308 0 197 286 48 0 chr2 169745792 169745855 -83510728 + L2 LINE L2 3238 3303 -10 1627 190 20 7 chr2 169745928 169746223 -83510360 - AluJo SINE Alu -13 299 1 185 342 40 0 chr2 169747535 169747611 -83508972 + L2 LINE L2 3230 3308 -5 302 261 0 22 chr2 169747903 169747995 -83508588 - L1MC4 LINE L1 -1339 6703 6614 * 312 289 0 48 chr2 169747967 169748071 -83508512 - L1MC4 LINE L1 -1330 6712 6614 217 245 10 10 chr2 169749100 169749198 -83507385 + GA-rich Low_complexity Low_complexity 2 99 0 27 29 0 0 chr2 169749791 169749825 -83506758 + AT_rich Low_complexity Low_complexity 1 34 0 256 284 256 6 chr2 169750985 169751161 -83505422 - MIR SINE MIR -9 253 34 270 176 0 0 chr2 169751722 169751773 -83504810 + (TA)n Simple_repeat Simple_repeat 2 52 0 396 0 0 0 chr2 169753188 169753232 -83503351 + (TG)n Simple_repeat Simple_repeat 2 45 0 181 277 85 0 chr2 169753275 169753322 -83503261 - L2 LINE L2 -18 3254 3204 21 0 0 0 chr2 169754443 169754464 -83502119 + AT_rich Low_complexity Low_complexity 1 21 0 1307 187 25 25 chr2 169755211 169755494 -83501089 - AluJo SINE Alu -7 305 23 197 33 33 0 chr2 169755629 169755659 -83500924 + (TG)n Simple_repeat Simple_repeat 2 32 0 405 39 0 0 chr2 169756324 169756375 -83500208 + (CA)n Simple_repeat Simple_repeat 2 52 0 762 266 46 126 chr2 169756381 169756927 -83499656 - L1MC4 LINE L1 -1875 5933 5432 234 194 46 9 chr2 169759095 169759203 -83497380 + (TA)n Simple_repeat Simple_repeat 1 112 0 24 0 0 0 chr2 169759715 169759739 -83496844 + AT_rich Low_complexity Low_complexity 1 24 0 284 127 18 0 chr2 169759762 169759817 -83496766 + (TA)n Simple_repeat Simple_repeat 2 57 0 223 345 71 0 chr2 169759899 169760012 -83496571 + MIR SINE MIR 32 152 -110 268 337 139 39 chr2 169760144 169760583 -83496000 + L2 LINE L2 2158 2640 -674 670 310 23 0 chr2 169761431 169761647 -83494936 + MLT1L LTR MaLR 387 607 -8 2031 129 7 10 chr2 169762665 169762968 -83493615 + AluSx SINE Alu 1 302 -10 191 70 0 93 chr2 169763079 169763122 -83493461 + (CAAAAA)n Simple_repeat Simple_repeat 4 42 0 29 0 0 0 chr2 169763638 169763667 -83492916 + AT_rich Low_complexity Low_complexity 1 29 0 239 311 106 0 chr2 169764150 169764282 -83492301 - L1ME4a LINE L1 -30 6091 5946 302 274 219 30 chr2 169764471 169764708 -83491875 - L1ME4a LINE L1 -443 5678 5397 523 310 188 0 chr2 169765301 169765514 -83491069 + MIR SINE MIR 8 260 -2 239 314 29 29 chr2 169765586 169765656 -83490927 - L2 LINE L2 -2 3311 3242 190 173 19 19 chr2 169765972 169766024 -83490559 + GA-rich Low_complexity Low_complexity 2 53 0 1880 170 24 3 chr2 169766627 169766956 -83489627 + MER2 DNA MER2_type 10 345 0 558 250 51 83 chr2 169767009 169767225 -83489358 - MIR SINE MIR -7 255 47 325 348 0 8 chr2 169767744 169767862 -83488721 + L2 LINE L2 3196 3312 -1 311 296 104 32 chr2 169767946 169768071 -83488512 + L2 LINE L2 3137 3270 -2 2236 102 0 3 chr2 169768639 169768958 -83487625 - AluSc SINE Alu 0 309 1 507 264 24 55 chr2 169769659 169769913 -83486670 - L1MC4a LINE L1 -1878 5930 5685 288 286 31 0 chr2 169770487 169770585 -83485998 - MIR3 SINE MIR -5 203 103 371 390 14 9 chr2 169770627 169770837 -83485746 - MIR SINE MIR -2 260 50 1286 278 50 20 chr2 169771623 169772134 -83484449 - L2 LINE L2 -67 3246 2725 1212 274 68 27 chr2 169772294 169772812 -83483771 + MLT2E LTR ERVL 27 624 -4 24 0 0 0 chr2 169773539 169773563 -83483020 + AT_rich Low_complexity Low_complexity 1 24 0 229 372 115 6 chr2 169774067 169774223 -83482360 + MIR SINE MIR 29 201 -61 2091 129 0 7 chr2 169775422 169775725 -83480858 + AluSg SINE Alu 1 301 -9 586 327 58 4 chr2 169775737 169775963 -83480620 - MIR SINE MIR -6 256 19 1238 219 34 0 chr2 169776247 169776512 -83480071 + L1M3e LINE L1 3 276 -6754 2257 275 61 51 chr2 169776522 169777642 -83478941 + L1M3e LINE L1 921 2051 -4979 271 211 19 0 chr2 169777642 169777694 -83478889 + Tigger5 DNA MER2_type 1 53 -2270 353 157 229 0 chr2 169777703 169777773 -83478810 + Tigger5 DNA MER2_type 2238 2323 0 2192 260 45 45 chr2 169777774 169778708 -83477875 + L1M4c LINE L1 928 1861 -4523 7646 209 37 11 chr2 169778798 169780658 -83475925 + L1M4c LINE L1 2700 4607 -1775 * 9910 159 15 14 chr2 169780655 169782224 -83474359 - L1P LINE L1 -1413 4733 3159 414 0 0 0 chr2 169782224 169782270 -83474313 + (TG)n Simple_repeat Simple_repeat 2 47 0 9910 159 15 14 chr2 169782270 169782543 -83474040 - L1P LINE L1 -2987 3159 2888 2836 85 0 0 chr2 169782543 169782927 -83473656 + L1PA13 LINE L1 5775 6161 -2 889 168 159 4 chr2 169782928 169783160 -83473423 + L1M4c LINE L1 4602 4869 -1513 725 173 0 0 chr2 169783132 169783265 -83473318 + L1MA9 LINE L1 6172 6304 -244 * 1301 152 45 0 chr2 169783314 169783557 -83473026 + L1MA9 LINE L1 6295 6548 0 314 96 0 19 chr2 169783676 169783728 -83472855 + (GGAA)n Simple_repeat Simple_repeat 3 53 0 593 315 33 9 chr2 169785591 169785804 -83470779 + MIR SINE MIR 20 237 -25 21 0 0 0 chr2 169788578 169788599 -83467984 + AT_rich Low_complexity Low_complexity 1 21 0 276 30 0 0 chr2 169789403 169789436 -83467147 + (CA)n Simple_repeat Simple_repeat 2 34 0 839 224 28 6 chr2 169791459 169791638 -83464945 - MER5A DNA MER1_type -1 188 6 920 222 49 8 chr2 169792009 169792275 -83464308 - Charlie5 DNA MER1_type 0 2624 2348 345 191 61 61 chr2 169792296 169792443 -83464140 - Charlie5 DNA MER1_type -2441 171 25 21 0 0 0 chr2 169792663 169792684 -83463899 + AT_rich Low_complexity Low_complexity 1 21 0 344 192 51 0 chr2 169792910 169792988 -83463595 - MIR SINE MIR -110 152 71 5980 158 18 13 chr2 169793615 169795698 -83460885 + L1PB3 LINE L1 4055 6147 -7 29 28 0 0 chr2 169795698 169795734 -83460849 + AT_rich Low_complexity Low_complexity 1 36 0 207 0 0 0 chr2 169796261 169796284 -83460299 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 1834 130 0 81 chr2 169796590 169796912 -83459671 + AluSx SINE Alu 1 296 -16 2325 63 0 3 chr2 169797135 169797443 -83459140 - AluSg SINE Alu 0 307 1 373 172 0 0 chr2 169797509 169797567 -83459016 + MER2 DNA MER2_type 37 94 -251 27 73 0 0 chr2 169798106 169798161 -83458422 + AT_rich Low_complexity Low_complexity 1 55 0 2739 23 0 0 chr2 169799289 169799597 -83456986 - AluY SINE Alu -3 308 1 21 36 0 0 chr2 169800060 169800088 -83456495 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr2 169800598 169800627 -83455956 + AT_rich Low_complexity Low_complexity 1 29 0 2323 88 7 0 chr2 169805359 169805665 -83450918 + AluSp SINE Alu 1 308 -5 2772 235 76 18 chr2 169806464 169807284 -83449299 - L1ME2 LINE L1 -19 6145 5279 200 250 18 0 chr2 169807284 169807340 -83449243 + (TA)n Simple_repeat Simple_repeat 1 57 0 1649 247 141 11 chr2 169807446 169808192 -83448391 - L1ME2 LINE L1 -946 5200 4358 1745 228 45 67 chr2 169808228 169808935 -83447648 + L1MC4 LINE L1 7363 8042 0 2242 74 27 3 chr2 169809415 169809591 -83446992 - AluY SINE Alu -6 305 118 351 0 0 0 chr2 169809591 169809630 -83446953 + (TG)n Simple_repeat Simple_repeat 2 40 0 2242 74 27 3 chr2 169809630 169809751 -83446832 - AluY SINE Alu -193 118 1 197 0 71 0 chr2 169809991 169810019 -83446564 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 455 286 8 8 chr2 169810962 169811095 -83445488 - MER94 DNA DNA -1 133 1 21 0 0 0 chr2 169811660 169811681 -83444902 + AT_rich Low_complexity Low_complexity 1 21 0 546 291 94 30 chr2 169811683 169811917 -83444666 - MIR SINE MIR -11 251 3 230 197 155 28 chr2 169812030 169812101 -83444482 - L2 LINE L2 0 3313 3234 375 314 127 30 chr2 169812447 169812683 -83443900 + MIR SINE MIR 4 262 0 23 33 0 0 chr2 169813182 169813212 -83443371 + AT_rich Low_complexity Low_complexity 1 30 0 327 279 110 64 chr2 169814886 169815367 -83441216 + L1ME4a LINE L1 5574 6076 -45 282 250 54 11 chr2 169816785 169816877 -83439706 + MER94 DNA DNA 10 105 -29 287 253 147 21 chr2 169817150 169817245 -83439338 + MIR SINE MIR 80 186 -76 243 277 123 67 chr2 169819754 169819949 -83436634 - MIR SINE MIR -5 257 52 1511 197 22 48 chr2 169819973 169820344 -83436239 + MLT1A1 LTR MaLR 5 365 0 397 379 40 0 chr2 169820482 169820656 -83435927 + MIR SINE MIR 63 243 -19 212 352 0 19 chr2 169820792 169820897 -83435686 - L2 LINE L2 -769 2545 2443 22 0 0 0 chr2 169821940 169821962 -83434621 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr2 169823704 169823734 -83432849 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr2 169826907 169826931 -83429652 + AT_rich Low_complexity Low_complexity 1 24 0 204 258 0 0 chr2 169827997 169828094 -83428489 + G-rich Low_complexity Low_complexity 2 98 0 2454 54 0 0 chr2 169830982 169831277 -83425306 - AluY SINE Alu -14 297 3 1134 229 44 55 chr2 169831288 169831581 -83425002 - AluJb SINE Alu -12 290 1 223 211 18 0 chr2 169832909 169832966 -83423617 + (TA)n Simple_repeat Simple_repeat 2 59 0 3578 277 96 37 chr2 169833187 169835582 -83421001 + L1ME1 LINE L1 46 2542 -3673 1860 196 10 24 chr2 169835582 169835925 -83420658 + L1MB7 LINE L1 5759 6096 -88 1705 180 41 18 chr2 169835925 169836264 -83420319 + MER7A DNA MER2_type 1 345 -1 1860 196 10 24 chr2 169836264 169836338 -83420245 + L1MB7 LINE L1 6096 6170 -14 3578 277 96 37 chr2 169836338 169836450 -83420133 + L1ME1 LINE L1 2542 2646 -3569 1185 154 22 22 chr2 169836451 169836678 -83419905 - THE1C LTR MaLR 0 375 149 5207 134 110 1 chr2 169836705 169837586 -83418997 - THE1C-int LTR MaLR -603 977 1 1510 163 89 50 chr2 169837586 169837947 -83418636 - THE1C LTR MaLR 0 375 1 593 246 107 0 chr2 169837953 169838225 -83418358 + L1ME1 LINE L1 2649 2949 -3266 1350 216 47 50 chr2 169838254 169838615 -83417968 + MLT1A1 LTR MaLR 6 365 0 1006 245 57 53 chr2 169838620 169838938 -83417645 + MLT2C1 LTR ERVL 14 332 -65 4001 252 90 55 chr2 169839002 169841380 -83415203 + L1ME1 LINE L1 2970 5430 -785 791 160 28 104 chr2 169841376 169841588 -83414995 + L1MA9 LINE L1 6116 6311 -1 * 1967 246 91 48 chr2 169841593 169842283 -83414300 + L1ME1 LINE L1 5420 6139 -96 547 252 31 0 chr2 169843221 169843348 -83413235 - MIR SINE MIR -68 194 64 242 257 0 0 chr2 169843747 169843817 -83412766 - L1MB7 LINE L1 -1 6183 6114 4199 68 10 0 chr2 169843842 169844690 -83411893 - L1P2 LINE L1 -496 5658 4806 3245 60 25 2 chr2 169844690 169845117 -83411466 + L1PA6 LINE L1 5710 6152 -2 473 209 43 17 chr2 169845122 169845237 -83411346 - L1MD2 LINE L1 -19 6340 6223 1760 242 149 6 chr2 169845280 169845756 -83410827 - MER77 LTR ERV1 0 605 62 226 289 72 36 chr2 169846187 169846270 -83410313 + L2 LINE L2 3186 3271 -1 237 279 17 31 chr2 169846302 169846656 -83409927 + GA-rich Low_complexity Low_complexity 1 349 0 192 240 140 0 chr2 169847288 169847338 -83409245 - MIR SINE MIR -67 141 85 1440 108 70 0 chr2 169848230 169848444 -83408139 - MER30 DNA MER1_type -1 229 1 271 291 30 55 chr2 169848884 169849127 -83407456 - MLT1L LTR MaLR -199 416 203 29 60 0 0 chr2 169849731 169849781 -83406802 + AT_rich Low_complexity Low_complexity 1 50 0 22 0 0 0 chr2 169849963 169849985 -83406598 + AT_rich Low_complexity Low_complexity 1 22 0 29 0 0 0 chr2 169850157 169850186 -83406397 + AT_rich Low_complexity Low_complexity 1 29 0 24 53 0 0 chr2 169851939 169851977 -83404606 + AT_rich Low_complexity Low_complexity 1 38 0 328 252 25 84 chr2 169852106 169852225 -83404358 + L2 LINE L2 3197 3308 -5 554 278 124 6 chr2 169852362 169852531 -83404052 + LTR33 LTR ERVL 15 203 -318 1834 154 47 16 chr2 169852603 169852967 -83403616 - THE1C LTR MaLR 0 375 1 10336 104 36 19 chr2 169852967 169854520 -83402063 - THE1C-int LTR MaLR 0 1580 1 2227 128 50 8 chr2 169854520 169854880 -83401703 - THE1C LTR MaLR 0 375 1 1682 161 3 59 chr2 169854942 169855308 -83401275 - MER4A LTR ERV1 0 664 261 800 334 47 18 chr2 169855390 169855731 -83400852 - ERVL LTR ERVL -2255 3509 3159 1112 324 56 17 chr2 169855733 169856214 -83400369 - ERVL LTR ERVL -2193 2803 2304 19864 178 27 15 chr2 169856214 169859163 -83397420 + L1MA2 LINE L1 16 2929 -4636 2297 105 14 6 chr2 169859163 169859515 -83397068 - THE1A LTR MaLR 0 355 1 19864 178 27 15 chr2 169859515 169863180 -83393403 + L1MA2 LINE L1 2929 6705 -860 30 77 0 0 chr2 169863187 169863252 -83393331 + AT_rich Low_complexity Low_complexity 1 65 0 * 6941 98 14 3 chr2 169863233 169864242 -83392341 + L1MA2 LINE L1 6704 7723 0 25 51 0 0 chr2 169864243 169864282 -83392301 + AT_rich Low_complexity Low_complexity 1 39 0 400 291 55 81 chr2 169864282 169864553 -83392030 - ERVL LTR ERVL -3413 2351 2088 451 216 0 0 chr2 169864557 169864631 -83391952 - MER2 DNA MER2_type 0 345 272 410 235 0 0 chr2 169864631 169864712 -83391871 + FRAM/FAM SINE Alu 1 73 -103 1646 137 3 46 chr2 169864739 169865024 -83391559 - MER2 DNA MER2_type -72 273 1 1125 291 34 20 chr2 169865027 169865385 -83391198 - ERVL LTR ERVL -2960 2036 1674 815 303 4 0 chr2 169865490 169865754 -83390829 + L1ME3A LINE L1 5676 5940 -230 25 0 0 0 chr2 169865761 169865786 -83390797 + AT_rich Low_complexity Low_complexity 1 25 0 229 234 88 98 chr2 169865877 169866082 -83390501 + L1ME3A LINE L1 5968 6170 0 1811 171 11 38 chr2 169866294 169866663 -83389920 - MER47A DNA MER2_type -4 362 4 6411 99 20 0 chr2 169866968 169868638 -83387945 + L1PA7 LINE L1 4466 6152 -2 573 310 12 12 chr2 169869216 169869387 -83387196 + MER5B DNA MER1_type 1 171 -7 760 325 114 14 chr2 169869835 169870272 -83386311 - MLT1J LTR MaLR -30 481 1 785 234 35 0 chr2 169870462 169870633 -83385950 + MER20 DNA MER1_type 21 197 -22 356 287 37 30 chr2 169870951 169871014 -83385569 - Charlie8 DNA MER1_type -81 260 199 1551 223 25 68 chr2 169871014 169871502 -83385081 - MLT1C LTR MaLR 0 467 1 356 287 37 30 chr2 169871502 169871602 -83384981 - Charlie8 DNA MER1_type -142 199 96 340 260 55 0 chr2 169872202 169872275 -83384308 - MLT1K LTR MaLR -440 148 72 264 59 0 0 chr2 169872294 169872328 -83384255 + (TGGA)n Simple_repeat Simple_repeat 1 34 0 210 236 0 0 chr2 169872357 169872412 -83384171 + CT-rich Low_complexity Low_complexity 2 56 0 233 311 25 41 chr2 169872614 169872736 -83383847 - L2 LINE L2 -218 3054 2935 195 239 45 91 chr2 169875410 169875498 -83381085 - L2 LINE L2 0 3313 3230 549 206 71 29 chr2 169875982 169876152 -83380431 + MIR SINE MIR 85 261 -1 354 307 34 45 chr2 169876160 169876336 -83380247 - MER5B DNA MER1_type -2 176 3 231 167 0 0 chr2 169877596 169877638 -83378945 + (CA)n Simple_repeat Simple_repeat 2 43 0 253 323 71 0 chr2 169878093 169878220 -83378363 - MIR SINE MIR 0 262 127 21 0 0 0 chr2 169879059 169879080 -83377503 + AT_rich Low_complexity Low_complexity 1 21 0 264 246 62 0 chr2 169879912 169879977 -83376606 + MER94 DNA DNA 4 72 -62 203 200 0 33 chr2 169880162 169880222 -83376361 + (TATATG)n Simple_repeat Simple_repeat 3 60 0 581 154 43 0 chr2 169880655 169880817 -83375766 + (TA)n Simple_repeat Simple_repeat 2 170 0 2329 79 7 0 chr2 169880893 169881185 -83375398 - AluSc SINE Alu -15 294 1 234 0 0 0 chr2 169881537 169881563 -83375020 + (TG)n Simple_repeat Simple_repeat 2 27 0 2024 129 0 3 chr2 169881598 169881892 -83374691 - AluSq SINE Alu -18 295 3 21 0 0 0 chr2 169881934 169881955 -83374628 + AT_rich Low_complexity Low_complexity 1 21 0 2028 104 0 0 chr2 169882110 169882370 -83374213 - AluSc SINE Alu -49 260 1 1130 277 36 53 chr2 169882667 169883519 -83373064 - L1M4b LINE L1 -3542 3415 2610 24 63 0 16 chr2 169883519 169883559 -83373024 + AT_rich Low_complexity Low_complexity 1 41 -21 1437 123 22 43 chr2 169883559 169883835 -83372748 - L1MA5A LINE L1 -4 6293 6024 24 63 0 16 chr2 169883835 169883857 -83372726 + AT_rich Low_complexity Low_complexity 41 62 0 21 36 0 0 chr2 169884102 169884130 -83372453 + AT_rich Low_complexity Low_complexity 1 28 0 1598 207 46 23 chr2 169884136 169884746 -83371837 - L1M4b LINE L1 -5679 1180 6 5928 134 4 6 chr2 169884782 169885734 -83370849 - L1MA3 LINE L1 -5 6300 5351 412 289 81 97 chr2 169885715 169886890 -83369693 - L1MEc LINE L1 -5206 1190 35 * 28 29 0 0 chr2 169886972 169887007 -83369576 + AT_rich Low_complexity Low_complexity 1 35 0 217 271 21 42 chr2 169887052 169887148 -83369435 + MIR SINE MIR 55 148 -114 445 280 161 0 chr2 169887342 169887528 -83369055 + MIR SINE MIR 47 262 0 6670 161 18 3 chr2 169888109 169888460 -83368123 - L1PB1 LINE L1 0 6151 5806 240 111 0 0 chr2 169888460 169888496 -83368087 + (TA)n Simple_repeat Simple_repeat 2 37 0 6670 161 18 3 chr2 169888496 169890328 -83366255 - L1PB1 LINE L1 -345 5806 3941 1339 207 0 0 chr2 169890325 169890595 -83365988 + L1PB1 LINE L1 3641 3910 -2236 * 1082 229 118 102 chr2 169890599 169891215 -83365368 - MLT1E2 LTR MaLR 0 626 1 536 263 50 57 chr2 169891251 169891513 -83365070 + L2 LINE L2 3054 3313 0 1658 172 45 56 chr2 169892091 169892409 -83364174 + MLT1A2 LTR MaLR 1 316 -58 1831 162 40 9 chr2 169892409 169892736 -83363847 + MER1B DNA MER1_type 1 337 0 1658 172 45 56 chr2 169892736 169892795 -83363788 + MLT1A2 LTR MaLR 316 374 0 305 342 19 51 chr2 169892824 169892982 -83363601 - MIR3 SINE MIR -54 154 2 1606 223 71 11 chr2 169894018 169894453 -83362130 + MLT1C LTR MaLR 4 464 -3 186 167 38 27 chr2 169898844 169898892 -83357691 - L3b LINE CR1 -10 1573 1518 250 413 45 10 chr2 169899230 169899518 -83357065 + L2 LINE L2 2559 2856 -458 510 341 11 6 chr2 169899758 169899937 -83356646 - MER5A DNA MER1_type -7 182 3 1041 316 50 45 chr2 169900533 169900902 -83355681 + LTR16A LTR ERVL 16 389 -61 1257 153 146 55 chr2 169900902 169901176 -83355407 + AluSg SINE Alu 1 299 -11 1041 316 50 45 chr2 169901176 169901224 -83355359 + LTR16A LTR ERVL 389 435 -15 3479 298 59 40 chr2 169901241 169902776 -83353807 + HERV16 LTR ERVL 13 1576 -3420 3377 304 60 25 chr2 169902842 169904066 -83352517 + HERV16 LTR ERVL 1712 2978 -2018 1632 149 174 0 chr2 169904136 169904452 -83352131 + MER83C LTR ERV1 3 373 0 3662 222 91 30 chr2 169904455 169905505 -83351078 + MER83C-int LTR ERV1 15 2204 -3845 2224 154 0 23 chr2 169905749 169906099 -83350484 + MER83B-int LTR ERV1 4525 4866 -14 1563 162 200 0 chr2 169906113 169906428 -83350155 + MER83B LTR ERV1 1 378 0 1278 328 36 2 chr2 169906795 169907207 -83349376 + LTR16A LTR ERVL 11 436 -14 24 0 0 0 chr2 169907444 169907468 -83349115 + AT_rich Low_complexity Low_complexity 1 24 0 212 236 73 0 chr2 169907953 169908008 -83348575 - MER91 DNA MER1_type -17 123 65 471 322 99 78 chr2 169908502 169909027 -83347556 + HAL1 LINE L1 818 1353 -1154 228 292 42 0 chr2 169909115 169909187 -83347396 + HAL1b LINE L1 392 466 -882 190 256 11 11 chr2 169909289 169909379 -83347204 + (CATATA)n Simple_repeat Simple_repeat 6 95 0 544 220 0 0 chr2 169909380 169909480 -83347103 - MER20 DNA MER1_type -1 218 119 222 220 0 0 chr2 169909532 169909591 -83346992 + (TA)n Simple_repeat Simple_repeat 2 60 0 260 316 0 0 chr2 169909605 169909703 -83346880 + (TA)n Simple_repeat Simple_repeat 1 98 0 2177 169 33 24 chr2 169909732 169910158 -83346425 - Tigger2a DNA MER2_type -1 433 4 213 39 0 0 chr2 169910203 169910229 -83346354 + (TGGA)n Simple_repeat Simple_repeat 4 29 0 2366 203 83 14 chr2 169910229 169910782 -83345801 + MER90 LTR ERV1 3 593 -21 331 323 0 67 chr2 169911069 169911233 -83345350 + HAL1b LINE L1 759 911 -437 235 172 58 23 chr2 169911723 169911810 -83344773 + (TA)n Simple_repeat Simple_repeat 2 91 0 345 311 64 60 chr2 169912073 169912340 -83344243 - L2 LINE L2 -941 2373 2106 2527 197 85 16 chr2 169912442 169913006 -83343577 - MLT2F LTR ERVL -58 605 3 183 179 107 89 chr2 169913229 169913285 -83343298 + L2 LINE L2 3257 3313 0 317 277 207 27 chr2 169913377 169913565 -83343018 + MIR SINE MIR 31 252 -10 225 0 0 0 chr2 169913747 169913772 -83342811 + (CA)n Simple_repeat Simple_repeat 1 25 0 192 125 0 0 chr2 169915146 169915178 -83341405 + (GA)n Simple_repeat Simple_repeat 1 32 0 693 183 0 9 chr2 169916344 169916459 -83340124 + Tigger3(Golem) DNA MER2_type 1 114 -2915 * 3714 133 81 16 chr2 169916444 169917150 -83339433 + Tigger3(Golem) DNA MER2_type 2278 3029 0 1913 110 10 0 chr2 169917371 169917661 -83338922 - L1PA13 LINE L1 -13 6150 5858 1347 121 70 0 chr2 169917713 169917928 -83338655 - MER30 DNA MER1_type 0 230 1 348 83 0 0 chr2 169918287 169918335 -83338248 + (TG)n Simple_repeat Simple_repeat 2 49 0 217 220 34 0 chr2 169918853 169918912 -83337671 + (TA)n Simple_repeat Simple_repeat 1 61 0 1139 291 47 28 chr2 169918920 169919387 -83337196 + MER74B LTR ERVL 72 547 -75 290 325 113 16 chr2 169919231 169919425 -83337158 - MER88 LTR ERVL -206 258 46 * 220 222 19 0 chr2 169919438 169919492 -83337091 + (CATATA)n Simple_repeat Simple_repeat 4 58 0 32 0 0 0 chr2 169919492 169919524 -83337059 + AT_rich Low_complexity Low_complexity 1 32 0 380 259 224 6 chr2 169919636 169919810 -83336773 + LTR33 LTR ERVL 5 216 -305 319 108 40 40 chr2 169919869 169919920 -83336663 + CT-rich Low_complexity Low_complexity 3 56 -20 1377 146 124 0 chr2 169919920 169920187 -83336396 - AluSx SINE Alu 0 302 3 319 108 40 40 chr2 169920187 169920209 -83336374 + CT-rich Low_complexity Low_complexity 55 76 0 183 80 0 0 chr2 169920831 169920856 -83335727 + (TCTA)n Simple_repeat Simple_repeat 2 26 0 194 270 16 32 chr2 169921526 169921589 -83334994 - MIR SINE MIR -131 77 16 339 130 0 0 chr2 169922873 169922927 -83333656 + (TC)n Simple_repeat Simple_repeat 1 54 0 2464 243 113 42 chr2 169923080 169924431 -83332152 + L1ME1 LINE L1 3781 5228 -918 2855 238 30 47 chr2 169924440 169925272 -83331311 + L1ME1 LINE L1 5273 6090 -76 540 55 112 0 chr2 169925274 169926054 -83330529 + (TA)n Simple_repeat Simple_repeat 1 867 0 24 32 0 0 chr2 169926440 169926471 -83330112 + AT_rich Low_complexity Low_complexity 1 31 0 3464 179 43 33 chr2 169926720 169927538 -83329045 + LTR1B LTR ERV1 1 826 0 2234 89 0 3 chr2 169928199 169928491 -83328092 + AluY SINE Alu 3 293 -18 23 0 0 0 chr2 169929742 169929765 -83326818 + AT_rich Low_complexity Low_complexity 1 23 0 1564 123 127 8 chr2 169929846 169930106 -83326477 + AluSg SINE Alu 1 291 -19 2274 90 0 10 chr2 169931334 169931634 -83324949 - AluY SINE Alu -14 297 1 983 244 7 18 chr2 169931689 169931963 -83324620 + L1M2 LINE L1 2245 2515 -4334 861 162 7 0 chr2 169931967 169932121 -83324462 - L1PA13 LINE L1 -17 6146 5992 1061 151 0 0 chr2 169932126 169932316 -83324267 + AluSg/x SINE Alu 123 312 0 1467 210 43 34 chr2 169932323 169933049 -83323534 + L1M2 LINE L1 3664 4493 -2355 * 9553 200 38 55 chr2 169933042 169935998 -83320585 + L1PA16 LINE L1 427 3430 -4135 3803 151 32 5 chr2 169935998 169936654 -83319929 + L1PA16 LINE L1 6903 7576 -9 9553 200 38 55 chr2 169936654 169937106 -83319477 + L1PA16 LINE L1 3430 3888 -3677 2106 53 46 7 chr2 169937106 169937389 -83319194 + AluY SINE Alu 1 294 -17 9553 200 38 55 chr2 169937389 169937550 -83319033 + L1PA16 LINE L1 3888 4616 -2949 508 167 0 10 chr2 169937651 169937747 -83318836 + THE1C-int LTR MaLR 1486 1580 0 1743 150 76 17 chr2 169937747 169938101 -83318482 + THE1C LTR MaLR 1 375 0 28 29 0 0 chr2 169938449 169938484 -83318099 + AT_rich Low_complexity Low_complexity 1 35 0 310 252 126 17 chr2 169938533 169938652 -83317931 + L2 LINE L2 3178 3309 -4 2486 139 33 49 chr2 169938817 169939307 -83317276 + L1MA2 LINE L1 5816 6297 -7 22 0 0 0 chr2 169939386 169939408 -83317175 + AT_rich Low_complexity Low_complexity 1 22 0 6763 29 0 2 chr2 169939997 169941125 -83315458 + L1PA3 LINE L1 4934 6059 -96 3072 193 50 3 chr2 169941225 169941841 -83314742 + MLT1-int LTR MaLR 88 732 -639 348 262 12 0 chr2 169941944 169942028 -83314555 + MLT1-int LTR MaLR 673 757 -978 1902 265 15 1 chr2 169942096 169942592 -83313991 + MLT1B-int LTR MaLR 953 1370 -1 1412 189 60 49 chr2 169942593 169942773 -83313810 + MLT1B LTR MaLR 1 178 -212 279 93 0 0 chr2 169942773 169942816 -83313767 + (TG)n Simple_repeat Simple_repeat 2 44 0 1412 189 60 49 chr2 169942816 169943021 -83313562 + MLT1B LTR MaLR 178 390 0 189 216 78 0 chr2 169943131 169943182 -83313401 - L2 LINE L2 -8 3264 3210 1137 193 29 8 chr2 169944390 169944634 -83311949 - L1MB5 LINE L1 0 6174 5926 535 286 117 0 chr2 169946154 169946325 -83310258 - MIR SINE MIR -24 238 48 267 313 12 0 chr2 169946546 169946626 -83309957 - L2 LINE L2 -4 3309 3229 4492 185 49 10 chr2 169946626 169947283 -83309300 + L1MA9 LINE L1 4251 4881 -1431 2226 107 0 0 chr2 169947283 169947574 -83309009 + AluSg SINE Alu 1 291 -19 4492 185 49 10 chr2 169947574 169948506 -83308077 + L1MA9 LINE L1 4881 5903 -409 272 231 141 0 chr2 169949020 169949098 -83307485 + MER58A DNA MER1_type 31 119 0 320 256 13 0 chr2 169949098 169949176 -83307407 + MER58A DNA MER1_type 146 224 0 500 272 42 38 chr2 169949668 169949881 -83306702 + LTR16C LTR ERVL 276 489 -2 322 254 89 93 chr2 169949881 169950117 -83306466 - L2 LINE L2 -90 3223 2989 308 319 60 0 chr2 169950867 169950983 -83305600 - MIR SINE MIR -56 206 84 333 247 0 35 chr2 169952063 169952148 -83304435 + MER92B LTR ERV1 1 82 -554 292 211 0 0 chr2 169952377 169952429 -83304154 + MER92C LTR ERV1 484 535 -19 180 306 16 0 chr2 169952741 169952803 -83303780 + MIR SINE MIR 200 262 0 16346 29 2 1 chr2 169953885 169956609 -83299974 - L1PA4 LINE L1 0 6155 3429 1791 182 44 62 chr2 169958133 169958682 -83297901 + L1M1 LINE L1 3239 3777 -2369 2786 168 37 2 chr2 169958777 169959702 -83296881 + L1M1 LINE L1 4774 5728 -577 1225 293 78 11 chr2 169959699 169960457 -83296126 + L1ME3A LINE L1 3161 3969 -2177 * 2158 265 52 8 chr2 169960474 169961186 -83295397 + L1ME3A LINE L1 5418 6160 -10 425 51 39 13 chr2 169961190 169961268 -83295315 + (TA)n Simple_repeat Simple_repeat 1 80 0 1661 194 104 40 chr2 169961268 169961738 -83294845 - MLT1D LTR MaLR -1 504 5 277 134 15 15 chr2 169961738 169961805 -83294778 + (TG)n Simple_repeat Simple_repeat 2 68 0 218 343 120 0 chr2 169961887 169961995 -83294588 + MIR3 SINE MIR 49 169 -39 488 265 56 31 chr2 169964192 169964390 -83292193 - MIR SINE MIR -48 214 13 1359 173 23 0 chr2 169964797 169965057 -83291526 - L1MA6 LINE L1 0 6300 6035 29 28 0 0 chr2 169965159 169965195 -83291388 + AT_rich Low_complexity Low_complexity 1 36 0 2307 95 7 0 chr2 169965288 169965583 -83291000 - AluSx SINE Alu -11 301 5 21 0 0 0 chr2 169965668 169965689 -83290894 + AT_rich Low_complexity Low_complexity 1 21 0 186 43 0 0 chr2 169966144 169966167 -83290416 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 470 371 130 23 chr2 169967778 169968422 -83288161 + L2 LINE L2 1362 2074 -1240 420 143 0 0 chr2 169968428 169968498 -83288085 + (CA)n Simple_repeat Simple_repeat 2 71 0 317 366 125 49 chr2 169968639 169968967 -83287616 + L2 LINE L2 2920 3272 0 438 319 83 75 chr2 169968997 169969263 -83287320 + L3 LINE CR1 228 495 -1082 8413 106 14 1 chr2 169969291 169971398 -83285185 + L1PA8 LINE L1 4096 6194 0 265 256 35 35 chr2 169971418 169971429 -83285154 + L3 LINE CR1 592 602 -975 2403 115 19 16 chr2 169971429 169971803 -83284780 + THE1C LTR MaLR 1 375 0 265 256 35 35 chr2 169971803 169971877 -83284706 + L3 LINE CR1 601 677 -900 188 35 35 0 chr2 169971878 169971907 -83284676 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 339 285 39 62 chr2 169971939 169972069 -83284514 + L3 LINE CR1 1450 1576 -1 250 387 47 33 chr2 169972972 169973246 -83283337 + L2 LINE L2 2510 2787 -527 219 331 145 28 chr2 169974753 169974841 -83281742 + MER5B DNA MER1_type 14 90 -88 216 0 0 0 chr2 169974841 169974865 -83281718 + (TG)n Simple_repeat Simple_repeat 2 25 0 219 331 145 28 chr2 169974865 169974921 -83281662 + MER5B DNA MER1_type 90 175 -3 313 233 76 135 chr2 169975953 169976193 -83280390 + MIR SINE MIR 47 262 0 225 0 0 0 chr2 169977166 169977191 -83279392 + (TG)n Simple_repeat Simple_repeat 2 26 0 314 368 45 0 chr2 169977827 169977960 -83278623 + MER91A DNA MER1_type 10 148 -48 1650 192 54 0 chr2 169978964 169979298 -83277285 - MER46B DNA MER2_type -9 227 1 23 0 0 0 chr2 169979408 169979431 -83277152 + AT_rich Low_complexity Low_complexity 1 23 0 288 0 0 0 chr2 169981559 169981591 -83274992 + (CA)n Simple_repeat Simple_repeat 2 33 0 297 375 10 10 chr2 169981919 169982023 -83274560 + MIR SINE MIR 31 134 -74 420 143 0 0 chr2 169983169 169983239 -83273344 + (GGAA)n Simple_repeat Simple_repeat 1 70 0 395 316 101 13 chr2 169984542 169984700 -83271883 - MIR SINE MIR -27 235 64 850 252 14 18 chr2 169984728 169984946 -83271637 + MER20 DNA MER1_type 1 217 -2 234 220 0 0 chr2 169985238 169985297 -83271286 + (TA)n Simple_repeat Simple_repeat 2 60 0 546 263 105 7 chr2 169985414 169985566 -83271017 - MIR SINE MIR -92 170 4 1127 189 49 4 chr2 169985894 169986138 -83270445 + L1MA4 LINE L1 6037 6291 -9 627 245 27 7 chr2 169986646 169986793 -83269790 + MIR SINE MIR 63 212 -50 184 226 0 57 chr2 169987286 169987339 -83269244 - L2 LINE L2 0 3272 3223 * 333 315 144 17 chr2 169987305 169987486 -83269097 - MIR SINE MIR -10 252 49 457 350 132 15 chr2 169987592 169988181 -83268402 + L2 LINE L2 1749 2406 -908 224 295 82 0 chr2 169988183 169988244 -83268339 + L2 LINE L2 2584 2649 -665 563 358 108 13 chr2 169988497 169988894 -83267689 - L2 LINE L2 -1 3312 2878 740 302 98 67 chr2 169988907 169989430 -83267153 + MLT1H LTR MaLR 1 539 -10 551 317 75 29 chr2 169989491 169989797 -83266786 - L2 LINE L2 -1219 2095 1776 793 310 53 0 chr2 169991177 169991458 -83265125 + LTR16B LTR ERVL 36 331 -133 1840 334 39 51 chr2 169991474 169992660 -83263923 + ERVL LTR ERVL 2614 3785 -1979 1341 169 43 128 chr2 169992663 169993084 -83263499 - MLT1B LTR MaLR -5 385 1 24 32 0 0 chr2 169993206 169993237 -83263346 + AT_rich Low_complexity Low_complexity 1 31 0 1081 194 40 49 chr2 169993254 169993501 -83263082 - AluJo SINE Alu -26 286 42 12414 141 27 6 chr2 169993601 169995627 -83260956 + Tigger1 DNA MER2_type 107 2174 -244 1191 260 98 32 chr2 169995641 169996387 -83260196 - L1ME LINE L1 -2575 3505 2711 4860 144 29 1 chr2 169996388 169997189 -83259394 - HSMAR2 DNA Mariner -478 824 2 273 57 0 0 chr2 169997199 169997234 -83259349 + (TCTA)n Simple_repeat Simple_repeat 2 36 0 1962 173 10 50 chr2 169997237 169997637 -83258946 - MLT1B LTR MaLR -6 384 1 780 294 82 28 chr2 169997807 169998498 -83258085 - L1ME LINE L1 -4835 1143 450 710 315 98 35 chr2 169998754 169999154 -83257429 - L1ME LINE L1 -5630 440 16 21 57 0 0 chr2 170000419 170000454 -83256129 + AT_rich Low_complexity Low_complexity 1 35 0 1590 173 0 4 chr2 170000622 170000882 -83255701 + AluJb SINE Alu 33 291 -21 21 82 0 0 chr2 170001537 170001586 -83254997 + AT_rich Low_complexity Low_complexity 1 49 0 2152 94 7 0 chr2 170002211 170002520 -83254063 - L1PA8 LINE L1 -4 6168 5858 30183 128 12 60 chr2 170002547 170005556 -83251027 - L1PA8 LINE L1 -581 5591 3011 3573 110 0 12 chr2 170005556 170006073 -83250510 + MER9 LTR ERVK 1 511 0 30183 128 12 60 chr2 170006073 170008946 -83247637 - L1PA8 LINE L1 -3161 3011 2 273 372 62 0 chr2 170009343 170009456 -83247127 - L3 LINE CR1 -74 1503 1384 180 111 0 0 chr2 170010176 170010203 -83246380 + (GAAAA)n Simple_repeat Simple_repeat 4 30 0 262 284 23 11 chr2 170010961 170011049 -83245534 - MIR3 SINE MIR -6 202 114 352 315 56 7 chr2 170011229 170011372 -83245211 - MIR SINE MIR -93 169 20 2860 183 87 5 chr2 170011542 170012171 -83244412 - L1MB7 LINE L1 -31 6153 5473 340 291 146 34 chr2 170012175 170012470 -83244113 - L1ME4a LINE L1 -218 5903 5576 387 0 0 0 chr2 170013362 170013405 -83243178 + (TC)n Simple_repeat Simple_repeat 2 44 0 252 0 0 0 chr2 170013404 170013432 -83243151 + (TG)n Simple_repeat Simple_repeat 1 28 0 * 232 290 58 58 chr2 170013696 170013834 -83242749 - HAL1 LINE L1 -263 2244 2107 1296 305 81 17 chr2 170013842 170014547 -83242036 - HAL1 LINE L1 -475 2032 1283 25 31 0 0 chr2 170014547 170014579 -83242004 + AT_rich Low_complexity Low_complexity 1 32 0 4450 146 14 0 chr2 170014585 170015312 -83241271 - L1PA15 LINE L1 -6 6159 5423 5045 84 39 0 chr2 170015312 170016029 -83240554 + L1PA13 LINE L1 5411 6156 -7 326 180 27 9 chr2 170016477 170016588 -83239995 + (TA)n Simple_repeat Simple_repeat 2 114 0 22 70 0 0 chr2 170016633 170016676 -83239907 + AT_rich Low_complexity Low_complexity 1 43 0 21 100 0 0 chr2 170016773 170016843 -83239740 + AT_rich Low_complexity Low_complexity 1 70 0 3871 137 74 85 chr2 170016953 170018347 -83238236 + pTR5 LTR ERV1 741 2438 0 2227 236 4 4 chr2 170018466 170018933 -83237650 + MLT1C LTR MaLR 1 467 0 356 320 180 21 chr2 170019084 170019512 -83237071 - L2 LINE L2 -5 3308 2813 229 198 49 37 chr2 170019816 170019897 -83236686 + MLT1K LTR MaLR 399 480 -108 529 330 65 48 chr2 170020346 170020570 -83236013 + L2 LINE L2 2813 3049 -264 2492 43 0 17 chr2 170020570 170020871 -83235712 - AluY SINE Alu -15 296 1 529 330 65 48 chr2 170020871 170021058 -83235525 + L2 LINE L2 3049 3231 -82 904 195 29 0 chr2 170021058 170021263 -83235320 - L1MA9 LINE L1 0 6312 6102 607 207 0 0 chr2 170021266 170021377 -83235206 - Tigger1 DNA MER2_type -12 2406 2296 245 88 0 0 chr2 170021377 170021411 -83235172 - Tigger1 DNA MER2_type -85 2333 2300 382 184 58 11 chr2 170021417 170021504 -83235079 + L1ME1 LINE L1 3569 3659 -2487 * 1827 250 28 5 chr2 170021500 170022076 -83234507 - L1 LINE L1 -2709 3437 2849 310 190 26 17 chr2 170022095 170022211 -83234372 + L1ME1 LINE L1 4399 4515 -1631 271 57 0 91 chr2 170022233 170022321 -83234262 + (TA)n Simple_repeat Simple_repeat 1 80 0 999 239 8 4 chr2 170022391 170022646 -83233937 + L1ME1 LINE L1 4614 4869 -1277 2076 190 41 41 chr2 170022696 170023181 -83233402 + MLT1D LTR MaLR 21 505 0 1868 256 72 57 chr2 170023185 170024352 -83232231 + L1ME1 LINE L1 4901 6093 -73 240 35 0 0 chr2 170024352 170024381 -83232202 + (TA)n Simple_repeat Simple_repeat 1 29 0 1868 256 72 57 chr2 170024381 170024448 -83232135 + L1ME1 LINE L1 6093 6157 -9 629 276 35 65 chr2 170024465 170024806 -83231777 + L1ME2 LINE L1 5825 6155 -9 953 330 68 22 chr2 170025415 170025873 -83230710 - MLT1K LTR MaLR -16 572 94 5830 96 64 0 chr2 170026581 170027722 -83228861 - L1PA12 LINE L1 -3 6165 4973 3132 166 7 13 chr2 170027726 170028324 -83228259 + L1PA13 LINE L1 1602 2195 -4592 376 213 0 0 chr2 170028785 170028860 -83227723 + MLT1K LTR MaLR 506 580 -8 25 0 0 0 chr2 170029564 170029589 -83226994 + AT_rich Low_complexity Low_complexity 1 25 0 248 337 59 48 chr2 170029627 170029814 -83226769 + MER5A DNA MER1_type 1 189 0 22 0 0 0 chr2 170030630 170030652 -83225931 + AT_rich Low_complexity Low_complexity 1 22 0 222 270 130 43 chr2 170031063 170031178 -83225405 - L2 LINE L2 -5 3267 3143 323 353 10 0 chr2 170031517 170031619 -83224964 - L2 LINE L2 -20 3293 3191 308 328 125 39 chr2 170031651 170032084 -83224499 + L2 LINE L2 2013 2482 -832 2851 103 51 14 chr2 170032426 170032810 -83223773 + MLT2A1 LTR ERVL 1 404 -40 189 107 0 0 chr2 170032810 170032838 -83223745 + (TA)n Simple_repeat Simple_repeat 2 29 0 2851 103 51 14 chr2 170032838 170032881 -83223702 + MLT2A1 LTR ERVL 404 444 0 1750 188 0 16 chr2 170033222 170033530 -83223053 + AluJb SINE Alu 1 303 -9 214 183 28 0 chr2 170034409 170034480 -83222103 + (TA)n Simple_repeat Simple_repeat 1 73 0 23 0 0 0 chr2 170034561 170034584 -83221999 + AT_rich Low_complexity Low_complexity 1 23 0 371 306 23 91 chr2 170035782 170036001 -83220582 - MIR SINE MIR -8 254 51 259 331 131 0 chr2 170036197 170036342 -83220241 + MER5A DNA MER1_type 26 189 0 192 360 20 10 chr2 170036968 170037068 -83219515 - L2 LINE L2 -291 2981 2881 2205 114 0 16 chr2 170037182 170037499 -83219084 - AluSq SINE Alu -1 312 1 455 299 62 21 chr2 170038194 170038343 -83218240 - MER5A DNA MER1_type -19 170 5 1887 235 19 26 chr2 170039294 170039868 -83216715 - L1M4 LINE L1 -1481 4665 4096 240 297 54 27 chr2 170039970 170040118 -83216465 + HAL1 LINE L1 1897 2048 -459 234 0 0 0 chr2 170040508 170040534 -83216049 + (CA)n Simple_repeat Simple_repeat 1 26 0 * 405 0 0 0 chr2 170040533 170040578 -83216005 + (GA)n Simple_repeat Simple_repeat 2 46 0 375 285 41 0 chr2 170041757 170041880 -83214703 - MIR3 SINE MIR -6 202 75 184 382 13 0 chr2 170041941 170042017 -83214566 - MIR3 SINE MIR -15 193 117 1398 258 48 0 chr2 170042590 170042904 -83213679 + REP3 LTR ERV 3 331 -231 230 229 86 0 chr2 170042923 170042993 -83213590 + REP3 LTR ERV 480 555 -7 461 277 39 30 chr2 170044335 170044486 -83212097 + MER5A DNA MER1_type 5 170 -19 431 209 0 0 chr2 170045187 170045273 -83211310 + AluS SINE Alu 5 90 -222 537 296 117 35 chr2 170045653 170045883 -83210700 - MIR SINE MIR -11 251 3 332 331 14 35 chr2 170047285 170047427 -83209156 + MIR SINE MIR 25 163 -99 24 0 0 0 chr2 170047560 170047584 -83208999 + AT_rich Low_complexity Low_complexity 1 24 0 1461 223 3 10 chr2 170049760 170050051 -83206532 - AluJb SINE Alu -23 289 1 4260 222 72 52 chr2 170050055 170050378 -83206205 + MER57-int LTR ERV1 2493 2808 -2063 2447 64 0 3 chr2 170050378 170050674 -83205909 + AluSg SINE Alu 1 295 -15 4260 222 72 52 chr2 170050674 170051162 -83205421 + MER57-int LTR ERV1 2808 3285 -1586 210 105 0 0 chr2 170051162 170051200 -83205383 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 4260 222 72 52 chr2 170051200 170051382 -83205201 + MER57-int LTR ERV1 3285 3462 -1409 2368 45 3 14 chr2 170051382 170051688 -83204895 + AluY SINE Alu 1 303 0 4260 222 72 52 chr2 170051688 170052614 -83203969 + MER57-int LTR ERV1 3462 4174 -697 700 279 61 18 chr2 170052705 170052934 -83203649 + MER57-int LTR ERV1 6614 6852 -685 2053 137 0 0 chr2 170053866 170054165 -83202418 - AluSx SINE Alu -13 299 1 217 196 0 22 chr2 170054250 170054296 -83202287 + (TA)n Simple_repeat Simple_repeat 2 46 0 462 302 84 54 chr2 170055048 170055776 -83200807 - HAL1b LINE L1 -503 845 96 27 0 0 0 chr2 170056020 170056047 -83200536 + AT_rich Low_complexity Low_complexity 1 27 0 2117 112 0 10 chr2 170057040 170057335 -83199248 + AluSq SINE Alu 9 300 -13 1668 139 8 0 chr2 170059733 170059898 -83196685 - AluJo SINE Alu -15 297 135 282 29 0 0 chr2 170059898 170059933 -83196650 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2385 67 0 0 chr2 170059933 170060217 -83196366 - AluY SINE Alu -27 284 1 1668 139 8 0 chr2 170060217 170060302 -83196281 - AluJo SINE Alu -176 136 44 3132 152 49 3 chr2 170060840 170061407 -83195176 - L1MC1 LINE L1 0 6333 5741 1057 159 24 0 chr2 170061407 170061614 -83194969 + L1PA8 LINE L1 5858 6069 -103 2202 103 0 13 chr2 170061733 170062033 -83194550 - AluSg SINE Alu -14 296 1 298 335 17 6 chr2 170062033 170062206 -83194377 - L1MC4a LINE L1 -1256 6552 6378 1688 266 47 49 chr2 170062497 170063270 -83193313 - L1MC4a LINE L1 -1736 6072 5300 2389 77 3 0 chr2 170063270 170063567 -83193016 - AluSg SINE Alu -11 299 2 1688 266 47 49 chr2 170063567 170063611 -83192972 - L1MC4a LINE L1 -2508 5300 5257 1705 163 82 18 chr2 170064955 170065298 -83191285 - MLT1A1 LTR MaLR 0 365 1 2801 122 28 30 chr2 170065377 170065836 -83190747 + MER4C LTR ERV1 1 458 -7 33 25 0 0 chr2 170067140 170067180 -83189403 + AT_rich Low_complexity Low_complexity 1 40 0 2066 152 28 11 chr2 170068070 170068426 -83188157 - THE1B LTR MaLR 0 364 3 1388 145 0 0 chr2 170068534 170068741 -83187842 - THE1B-int LTR MaLR -191 1389 1183 322 283 136 68 chr2 170069260 170069696 -83186887 + L1ME LINE L1 42 513 -5557 703 303 73 28 chr2 170069999 170070679 -83185904 + L1ME LINE L1 525 1235 -4845 796 193 7 0 chr2 170071562 170071707 -83184876 + AluJb SINE Alu 157 302 -10 309 26 0 0 chr2 170071707 170071745 -83184838 + (TA)n Simple_repeat Simple_repeat 2 39 0 305 237 17 17 chr2 170072257 170072375 -83184208 - L1ME4a LINE L1 -5 5979 1160 315 0 0 0 chr2 170072394 170072429 -83184154 + (CA)n Simple_repeat Simple_repeat 2 36 0 23 33 0 0 chr2 170072677 170072707 -83183876 + AT_rich Low_complexity Low_complexity 1 30 0 207 214 18 18 chr2 170073234 170073290 -83183293 + (TTCA)n Simple_repeat Simple_repeat 3 58 0 380 376 102 45 chr2 170073303 170073723 -83182860 - L2 LINE L2 -17 3255 2812 1374 261 107 14 chr2 170074042 170074211 -83182372 - L1ME2 LINE L1 0 6098 5946 2407 132 51 14 chr2 170074211 170074643 -83181940 + MER83 LTR ERV1 1 448 0 1374 261 107 14 chr2 170074643 170075274 -83181309 - L1ME2 LINE L1 -152 5946 5205 458 241 91 32 chr2 170075267 170075520 -83181063 - L1ME2 LINE L1 -5224 846 579 * 31 0 0 0 chr2 170075538 170075569 -83181014 + AT_rich Low_complexity Low_complexity 1 31 0 863 287 106 45 chr2 170075722 170076234 -83180349 - L1ME2 LINE L1 -5527 543 1 210 37 0 0 chr2 170076270 170076297 -83180286 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 638 316 42 50 chr2 170076414 170076894 -83179689 - L1ME LINE L1 -5563 507 32 416 329 15 0 chr2 170077220 170077357 -83179226 - MIR SINE MIR -13 249 111 219 255 64 0 chr2 170077458 170077505 -83179078 - MIR SINE MIR -192 70 21 1514 197 89 11 chr2 170077730 170078101 -83178482 - L1MCb LINE L1 -4923 984 585 2344 32 0 0 chr2 170078112 170078396 -83178187 - L1PA5 LINE L1 -1009 5137 4854 6855 41 10 2 chr2 170078396 170079340 -83177243 + L1PA5 LINE L1 5158 6107 -47 1321 237 148 15 chr2 170079493 170079953 -83176630 - L1MCb LINE L1 -5877 549 29 444 154 18 9 chr2 170080384 170080494 -83176089 + (TA)n Simple_repeat Simple_repeat 2 112 0 24 53 0 0 chr2 170080649 170080687 -83175896 + AT_rich Low_complexity Low_complexity 1 38 0 417 225 45 36 chr2 170081277 170081388 -83175195 + MIR SINE MIR 1 112 -150 735 241 120 81 chr2 170081409 170081791 -83174792 + MER57A LTR ERV1 5 401 -2 180 286 20 0 chr2 170083460 170083509 -83173074 - MIR SINE MIR -58 150 101 267 259 109 34 chr2 170083544 170083691 -83172892 - L1MC4a LINE L1 -490 7318 7161 1348 224 15 8 chr2 170085512 170085776 -83170807 + Tigger7 DNA MER2_type 1 266 -284 563 153 20 10 chr2 170085774 170085872 -83170711 + Tigger7 DNA MER2_type 2389 2487 0 * 1671 201 94 3 chr2 170085912 170086275 -83170308 + MSTD LTR MaLR 1 396 0 2059 138 0 0 chr2 170086324 170086620 -83169963 + AluSx SINE Alu 1 296 -16 248 284 37 0 chr2 170090268 170090349 -83166234 + MER103 DNA DNA 36 119 -47 23 0 0 0 chr2 170091717 170091740 -83164843 + AT_rich Low_complexity Low_complexity 1 23 0 261 0 0 0 chr2 170092536 170092565 -83164018 + (TG)n Simple_repeat Simple_repeat 1 29 0 189 0 0 0 chr2 170092564 170092585 -83163998 + (GA)n Simple_repeat Simple_repeat 1 21 0 * 1956 175 12 12 chr2 170092821 170093164 -83163419 + MER61A LTR ERV1 1 343 0 5280 138 50 21 chr2 170093164 170094701 -83161882 + MER61A-int LTR ERV1 1 2250 -2967 1244 218 109 7 chr2 170094979 170095391 -83161192 + Charlie4a DNA MER1_type 54 507 -1 588 247 53 99 chr2 170095591 170095834 -83160749 + MIR SINE MIR 31 262 0 218 157 216 0 chr2 170095946 170095997 -83160586 + L2 LINE L2 3251 3312 -1 269 309 113 0 chr2 170096738 170096835 -83159748 + MIR3 SINE MIR 71 178 -30 3529 157 19 3 chr2 170097507 170098101 -83158482 - LTR26 LTR ERV1 0 603 1 977 305 91 7 chr2 170098234 170098664 -83157919 + HsTC2 DNA Tc2 347 812 -1086 959 194 33 0 chr2 170099049 170099229 -83157354 + MER5A DNA MER1_type 1 186 -3 255 288 76 8 chr2 170099679 170099797 -83156786 + MER103 DNA DNA 36 161 -5 6348 88 6 12 chr2 170100415 170100846 -83155737 + MER61A-int LTR ERV1 2440 2872 -2345 3269 108 10 19 chr2 170100846 170101362 -83155221 - MER9 LTR ERVK 0 511 1 6348 88 6 12 chr2 170101362 170102561 -83154022 + MER61A-int LTR ERV1 2872 4116 -1101 6029 117 35 1 chr2 170102561 170103468 -83153115 + MER61A-int LTR ERV1 4280 5217 0 2073 168 15 3 chr2 170103468 170103807 -83152776 + MER61A LTR ERV1 1 343 0 203 239 0 0 chr2 170104392 170104438 -83152145 + CT-rich Low_complexity Low_complexity 1 46 0 334 265 26 17 chr2 170105540 170105657 -83150926 - L1MDb LINE L1 -5186 1223 1106 2323 102 0 10 chr2 170105962 170106276 -83150307 - AluY SINE Alu 0 311 1 1856 161 0 0 chr2 170106977 170107276 -83149307 - AluSx SINE Alu -13 299 1 217 196 0 22 chr2 170107362 170107408 -83149175 + (TA)n Simple_repeat Simple_repeat 1 45 0 313 122 0 0 chr2 170108890 170108939 -83147644 + MADE1 DNA Mariner 32 80 0 230 128 0 85 chr2 170108975 170109022 -83147561 - MIR SINE MIR -111 151 109 465 246 88 44 chr2 170110047 170110283 -83146300 + MER113 DNA MER1_type? 75 326 -195 2649 93 0 3 chr2 170110283 170110639 -83145944 + THE1A LTR MaLR 1 355 0 465 246 88 44 chr2 170110639 170110674 -83145909 + MER113 DNA MER1_type? 326 358 -163 318 310 65 50 chr2 170111029 170111229 -83145354 + L1MEd LINE L1 97 299 -5906 540 298 66 44 chr2 170111236 170111578 -83145005 + L1MEd LINE L1 357 753 -5452 2130 104 0 49 chr2 170111578 170111760 -83144823 - AluSx SINE Alu 0 312 152 2066 88 47 10 chr2 170111760 170112056 -83144527 - AluY SINE Alu -3 308 2 2130 104 0 49 chr2 170112056 170112201 -83144382 - AluSx SINE Alu -160 152 1 540 298 66 44 chr2 170112201 170112376 -83144207 + L1MEd LINE L1 753 923 -5282 409 306 138 14 chr2 170112640 170112987 -83143596 + L1MEd LINE L1 1262 1651 -4745 272 89 22 0 chr2 170112997 170113042 -83143541 + MADE1 DNA Mariner 35 80 0 250 347 27 27 chr2 170113821 170113971 -83142612 + L1MEd LINE L1 305 454 -5665 2632 40 0 0 chr2 170114913 170115216 -83141367 + AluY SINE Alu 1 303 -8 23 78 0 0 chr2 170115429 170115480 -83141103 + AT_rich Low_complexity Low_complexity 1 51 0 322 302 72 14 chr2 170116572 170116711 -83139872 + L1ME4a LINE L1 5931 6077 -44 238 218 69 23 chr2 170116725 170116812 -83139771 - Zaphod DNA AcHobo -323 3708 3618 3086 157 49 3 chr2 170117350 170117917 -83138666 - L1MC1 LINE L1 0 6333 5741 2286 86 0 0 chr2 170117917 170118231 -83138352 + L1PA8 LINE L1 5858 6171 -1 3284 203 47 11 chr2 170118235 170118690 -83137893 - L1MC1 LINE L1 -579 5754 5317 1786 103 0 0 chr2 170118690 170118924 -83137659 + AluSc SINE Alu 65 298 -11 3284 203 47 11 chr2 170118924 170119250 -83137333 - L1MC1 LINE L1 -1016 5317 5004 180 0 0 0 chr2 170119250 170119270 -83137313 + (TTTTA)n Simple_repeat Simple_repeat 5 24 0 3284 203 47 11 chr2 170119270 170119780 -83136803 - L1MC1 LINE L1 -1329 5004 4409 247 278 42 0 chr2 170120367 170120439 -83136144 - L2 LINE L2 -7 3306 3232 354 286 0 16 chr2 170121128 170121254 -83135329 + (TATATG)n Simple_repeat Simple_repeat 6 129 0 237 196 0 0 chr2 170122047 170122098 -83134485 + (TA)n Simple_repeat Simple_repeat 2 52 0 378 285 49 14 chr2 170122232 170122376 -83134207 + L1 LINE L1 3688 3836 -2310 318 225 62 0 chr2 170123659 170123739 -83132844 - HsTC2 DNA Tc2 -1 1897 1813 357 24 0 0 chr2 170123928 170123970 -83132613 + (CA)n Simple_repeat Simple_repeat 1 42 0 195 254 175 0 chr2 170124631 170124694 -83131889 + MER5A DNA MER1_type 40 113 -76 187 263 105 0 chr2 170124686 170124743 -83131840 - MER5B DNA MER1_type -115 63 1 * 30 69 0 0 chr2 170124974 170125032 -83131551 + AT_rich Low_complexity Low_complexity 1 58 0 232 244 13 26 chr2 170125167 170125245 -83131338 + (TATATG)n Simple_repeat Simple_repeat 3 79 0 276 111 0 0 chr2 170125255 170125291 -83131292 - U2 snRNA snRNA -152 36 1 30 27 0 0 chr2 170126004 170126041 -83130542 + AT_rich Low_complexity Low_complexity 1 37 0 475 336 56 17 chr2 170127589 170127821 -83128762 - MIR SINE MIR -13 249 9 5495 70 1 1 chr2 170128049 170128789 -83127794 + pTR5 LTR ERV1 393 2468 0 * 21993 98 5 11 chr2 170128789 170131868 -83124715 + HERV17 LTR ERV1 79 3139 -5260 6338 100 3 12 chr2 170131875 170132778 -83123805 + HERV17 LTR ERV1 4080 4974 -3425 1880 118 25 32 chr2 170132745 170133625 -83122958 + HERV17 LTR ERV1 703 1720 -5176 * 4643 100 3 0 chr2 170133619 170134261 -83122322 + HERV17 LTR ERV1 7756 8399 0 4391 69 128 2 chr2 170134261 170134872 -83121711 + LTR12 LTR ERV1 1 688 0 1479 248 52 7 chr2 170135051 170135475 -83121108 + LTR47B LTR ERVL 1 443 0 412 259 22 37 chr2 170135890 170136025 -83120558 - Charlie8 DNA MER1_type -2212 205 73 270 241 0 0 chr2 170138180 170138238 -83118345 - MER103 DNA DNA -57 109 52 225 0 0 0 chr2 170138446 170138471 -83118112 + (TG)n Simple_repeat Simple_repeat 1 25 0 21 36 0 0 chr2 170139236 170139264 -83117319 + AT_rich Low_complexity Low_complexity 1 28 0 3587 136 55 50 chr2 170139716 170140439 -83116144 + LTR8A LTR ERV1 1 727 0 1114 245 9 0 chr2 170140439 170140655 -83115928 + HUERS-P1 LTR ERV1 1 218 -6045 261 135 19 39 chr2 170140784 170140836 -83115747 + HUERS-P1 LTR ERV1 475 525 -5738 6638 210 31 23 chr2 170140906 170141965 -83114618 + HUERS-P1 LTR ERV1 662 1572 -4374 1839 145 78 20 chr2 170141965 170142309 -83114274 - THE1B LTR MaLR 0 364 1 6638 210 31 23 chr2 170142309 170142765 -83113818 + HUERS-P1 LTR ERV1 1572 2023 -3923 1569 212 74 104 chr2 170142773 170143272 -83113311 + HUERS-P1 LTR ERV1 2931 3414 -4123 724 244 38 48 chr2 170143342 170143633 -83112950 + HUERS-P1 LTR ERV1 1824 2111 -4487 * 7010 203 76 55 chr2 170143628 170145827 -83110756 + HUERS-P1 LTR ERV1 3652 5790 -541 1204 163 147 49 chr2 170145849 170146175 -83110408 + HUERS-P1 LTR ERV1 5914 6271 -60 771 274 11 0 chr2 170146324 170146510 -83110073 + HUERS-P1 LTR ERV1 6076 6263 0 2585 150 65 12 chr2 170146510 170147002 -83109581 + LTR8A LTR ERV1 1 518 -209 3823 78 29 100 chr2 170147014 170147665 -83108918 + LTR14B LTR ERVK 4 608 0 850 250 0 21 chr2 170147675 170147863 -83108720 + LTR8 LTR ERV1 497 680 -11 1431 181 144 34 chr2 170148104 170148547 -83108036 + LTR54B LTR ERV1 1 492 -6 529 258 39 38 chr2 170148609 170148891 -83107692 + MER31-int LTR ERV1 1995 2239 -4092 459 224 61 20 chr2 170148864 170149011 -83107572 + MER31-int LTR ERV1 329 481 -7056 * 1136 186 4 174 chr2 170149143 170149648 -83106935 + MER31-int LTR ERV1 478 3352 -4185 278 250 57 32 chr2 170149729 170149853 -83106730 + MER31-int LTR ERV1 2551 2677 -3654 1601 166 3 24 chr2 170149864 170150154 -83106429 - AluSg SINE Alu -17 293 10 254 208 0 0 chr2 170150258 170150311 -83106272 + MER31-int LTR ERV1 566 618 -6919 751 215 0 86 chr2 170150337 170150570 -83106013 + MER31-int LTR ERV1 617 829 -6708 392 218 57 32 chr2 170150649 170150773 -83105810 + MER31-int LTR ERV1 2551 2677 -3654 2034 123 3 23 chr2 170150782 170151083 -83105500 - AluSg SINE Alu -15 295 1 511 188 0 0 chr2 170151099 170151184 -83105399 - MER54A LTR ERVL -561 340 256 * 524 113 0 12 chr2 170151175 170151255 -83105328 - MER54A LTR ERVL -816 85 7 889 217 87 74 chr2 170151434 170151994 -83104589 + MER31-int LTR ERV1 1095 1520 -3416 259 269 29 57 chr2 170152093 170152268 -83104315 + MER31-int LTR ERV1 1723 1892 -3231 895 199 6 0 chr2 170152285 170152441 -83104142 - AluJo SINE Alu -29 283 127 1473 231 46 54 chr2 170152455 170152751 -83103832 + MER31-int LTR ERV1 2409 2681 -2255 1528 220 3 10 chr2 170152751 170153055 -83103528 - AluJb SINE Alu -10 302 1 1473 231 46 54 chr2 170153055 170153371 -83103212 + MER31-int LTR ERV1 2681 2998 -1938 2162 113 0 3 chr2 170153382 170153691 -83102892 + AluSg SINE Alu 1 308 -2 2164 85 3 38 chr2 170153922 170154238 -83102345 - AluSc SINE Alu -4 305 1 2173 89 3 10 chr2 170154248 170154540 -83102043 - AluSx SINE Alu -14 298 9 1629 185 34 0 chr2 170154559 170154856 -83101727 + LOR1b LTR ERV1 155 461 0 390 277 106 21 chr2 170155629 170155770 -83100813 - MIR SINE MIR -1 261 109 444 216 40 32 chr2 170155776 170155901 -83100682 + L2 LINE L2 2395 2520 -794 4472 132 40 6 chr2 170156299 170157252 -83099331 + L1MA6 LINE L1 5095 6080 -220 1287 107 123 7 chr2 170157252 170157554 -83099029 + Charlie3 DNA MER1_type 1 2527 -183 851 189 0 16 chr2 170157654 170157839 -83098744 + L1MA8 LINE L1 4973 5154 -992 * 5029 150 19 21 chr2 170157837 170158907 -83097676 + L1MA8 LINE L1 5106 6164 -127 8982 144 8 1 chr2 170159008 170160510 -83096073 - L1P LINE L1 -1640 4506 2995 281 349 63 16 chr2 170161358 170161484 -83095099 + L2 LINE L2 3137 3268 -4 243 298 25 41 chr2 170161474 170161595 -83094988 + MIR SINE MIR 33 151 -111 * 25 31 0 0 chr2 170161749 170161781 -83094802 + AT_rich Low_complexity Low_complexity 1 32 0 838 84 7 78 chr2 170162428 170162582 -83094001 + L1 LINE L1 4674 4816 -1330 818 138 31 19 chr2 170162580 170162739 -83093844 + L1MA8 LINE L1 6021 6181 -110 * 24 53 0 0 chr2 170162739 170162777 -83093806 + AT_rich Low_complexity Low_complexity 1 38 0 2739 227 81 77 chr2 170163629 170163736 -83092847 + L1MB5 LINE L1 4080 4185 -1989 2082 133 130 18 chr2 170163736 170164121 -83092462 + MSTA LTR MaLR 1 428 0 2739 227 81 77 chr2 170164121 170165499 -83091084 + L1MB5 LINE L1 4185 5571 -603 2076 119 20 0 chr2 170165499 170165793 -83090790 + AluSq SINE Alu 1 300 -13 2739 227 81 77 chr2 170165793 170166251 -83090332 + L1MB5 LINE L1 5571 6026 -148 1651 147 46 46 chr2 170166410 170166804 -83089779 + L1MA4A LINE L1 5906 6299 -4 783 269 70 8 chr2 170166825 170167081 -83089502 + LTR16B LTR ERVL 191 462 -2 1393 349 53 17 chr2 170167108 170167976 -83088607 + HERV16 LTR ERVL 96 994 -4002 981 308 106 21 chr2 170168133 170168893 -83087690 + HERV16 LTR ERVL 1200 2078 -2918 367 295 114 18 chr2 170169439 170169605 -83086978 - MIR SINE MIR -69 193 12 561 245 20 34 chr2 170169607 170169754 -83086829 - MIR SINE MIR -1 261 117 296 345 126 0 chr2 170170922 170171096 -83085487 - MIR SINE MIR -19 243 48 2188 88 14 0 chr2 170171214 170171497 -83085086 - AluSc SINE Alu -18 291 5 244 333 25 0 chr2 170172331 170172412 -83084171 - MIR3 SINE MIR 0 208 126 1050 132 103 5 chr2 170173789 170173993 -83082590 + L1MA3 LINE L1 6079 6302 -3 30 0 0 0 chr2 170173993 170174023 -83082560 + AT_rich Low_complexity Low_complexity 1 30 0 453 370 15 27 chr2 170174134 170174396 -83082187 + HAL1 LINE L1 812 1070 -1437 2826 159 33 74 chr2 170174401 170174818 -83081765 + L1PB1 LINE L1 5449 5825 -326 432 0 0 0 chr2 170174818 170174866 -83081717 + (TCTA)n Simple_repeat Simple_repeat 3 50 0 2826 159 33 74 chr2 170174866 170175177 -83081406 + L1PB1 LINE L1 5825 6147 -4 228 255 124 52 chr2 170175190 170175343 -83081240 + L1MC4a LINE L1 5811 5974 -1834 23 33 0 0 chr2 170175474 170175504 -83081079 + AT_rich Low_complexity Low_complexity 1 30 0 230 276 102 41 chr2 170175641 170175739 -83080844 - L2 LINE L2 -7 3306 3203 253 309 75 32 chr2 170175841 170175935 -83080648 + MER63A DNA MER1_type 113 210 0 1853 158 7 0 chr2 170176011 170176308 -83080275 - AluJo SINE Alu -13 299 1 1657 267 63 55 chr2 170176412 170177067 -83079516 - L1M4 LINE L1 -5863 679 20 1473 236 65 0 chr2 170177081 170177525 -83079058 - L1MC4 LINE L1 -445 7597 7125 225 348 70 9 chr2 170177564 170177679 -83078904 + L2 LINE L2 3192 3313 0 1278 273 47 56 chr2 170178098 170178648 -83077935 + MER77 LTR ERV1 54 598 -7 307 320 23 8 chr2 170178869 170178997 -83077586 + MLT1I LTR MaLR 280 409 0 1698 199 0 3 chr2 170179251 170179553 -83077030 + AluJo SINE Alu 2 302 -10 355 252 41 0 chr2 170180170 170180293 -83076290 + (TA)n Simple_repeat Simple_repeat 2 129 0 21 36 0 0 chr2 170180614 170180642 -83075941 + AT_rich Low_complexity Low_complexity 1 28 0 2506 56 0 0 chr2 170180773 170181075 -83075508 + AluY SINE Alu 1 302 -9 253 341 22 0 chr2 170181082 170181173 -83075410 - MIR SINE MIR -12 250 158 21 0 0 0 chr2 170183704 170183725 -83072858 + AT_rich Low_complexity Low_complexity 1 21 0 2291 168 16 0 chr2 170183985 170184367 -83072216 + MLT1B LTR MaLR 1 388 -2 186 320 170 59 chr2 170184478 170184631 -83071952 - L2 LINE L2 0 3272 3103 380 330 106 13 chr2 170184826 170185129 -83071454 + L2 LINE L2 2296 2626 -688 234 91 0 0 chr2 170185694 170185727 -83070856 + (TTA)n Simple_repeat Simple_repeat 2 34 0 45 19 0 0 chr2 170186125 170186177 -83070406 + AT_rich Low_complexity Low_complexity 1 52 0 301 207 24 24 chr2 170190701 170190783 -83065800 - MER103 DNA DNA -56 110 29 311 277 110 13 chr2 170191682 170191837 -83064746 - L1ME4a LINE L1 -5 6116 5947 497 317 14 7 chr2 170193293 170193438 -83063145 + MIR3 SINE MIR 17 162 -46 304 349 109 10 chr2 170194119 170194311 -83062272 - MLT1J1 LTR MaLR -235 211 1 456 344 96 0 chr2 170195619 170195849 -83060734 - MLT1J2 LTR MaLR -162 288 37 44 63 0 0 chr2 170196285 170196364 -83060219 + AT_rich Low_complexity Low_complexity 1 79 0 481 246 43 20 chr2 170196564 170196715 -83059868 + MLT1H LTR MaLR 23 142 -267 350 186 42 127 chr2 170196856 170196974 -83059609 + MLT1E3 LTR MaLR 411 564 -31 26 0 0 0 chr2 170198499 170198525 -83058058 + AT_rich Low_complexity Low_complexity 1 26 0 4527 197 38 12 chr2 170198692 170199842 -83056741 + L1MA9 LINE L1 4304 5485 -683 686 253 6 6 chr2 170199847 170200021 -83056562 + FRAM SINE Alu 1 174 -2 2573 209 76 47 chr2 170200021 170200433 -83056150 + L1MA9 LINE L1 5493 5891 -421 243 0 0 0 chr2 170200433 170200460 -83056123 + (TA)n Simple_repeat Simple_repeat 1 27 0 2657 45 0 0 chr2 170200464 170200775 -83055808 - AluY SINE Alu 0 311 1 2573 209 76 47 chr2 170200775 170201109 -83055474 + L1MA9 LINE L1 5893 6266 -46 385 228 0 0 chr2 170201138 170201217 -83055366 + MLT1E3 LTR MaLR 544 622 -2 29 47 0 0 chr2 170201386 170201429 -83055154 + AT_rich Low_complexity Low_complexity 1 43 0 509 284 114 33 chr2 170201838 170202049 -83054534 - MIR SINE MIR -11 251 24 21 36 0 0 chr2 170202951 170202979 -83053604 + AT_rich Low_complexity Low_complexity 1 28 0 35 24 0 0 chr2 170204307 170204349 -83052234 + AT_rich Low_complexity Low_complexity 1 42 0 475 317 100 17 chr2 170205566 170205806 -83050777 - MIR SINE MIR -1 261 2 1744 102 0 0 chr2 170208270 170208506 -83048077 - AluSg/x SINE Alu -2 310 75 246 268 52 21 chr2 170208672 170208769 -83047814 + MIR SINE MIR 67 166 -96 355 324 9 0 chr2 170208815 170208923 -83047660 - MLT1I LTR MaLR -300 109 1 323 320 0 0 chr2 170208923 170209026 -83047557 + MIR SINE MIR 160 262 0 231 246 49 0 chr2 170209364 170209425 -83047158 + MER94 DNA DNA 18 81 -53 360 357 70 7 chr2 170209694 170209837 -83046746 + L2 LINE L2 3121 3272 0 202 326 30 53 chr2 170210362 170210494 -83046089 + L2 LINE L2 2611 2739 -575 29 47 0 0 chr2 170210503 170210546 -83046037 + AT_rich Low_complexity Low_complexity 1 43 0 184 233 35 70 chr2 170210561 170210647 -83045936 - L3 LINE CR1 -196 1381 1299 336 342 75 0 chr2 170211730 170211850 -83044733 + MIR3 SINE MIR 40 168 -40 207 294 132 37 chr2 170212201 170212337 -83044246 - MER5A DNA MER1_type -24 165 17 527 313 116 11 chr2 170212424 170212699 -83043884 - MER102b DNA MER1_type 0 341 38 228 128 26 0 chr2 170214216 170214255 -83042328 - L2 LINE L2 0 3313 3274 258 297 82 51 chr2 170214440 170214530 -83042053 - L1MC4a LINE L1 -1875 5933 5847 1750 154 0 67 chr2 170214530 170214684 -83041899 + AluJo SINE Alu 1 123 -189 2272 97 0 0 chr2 170214684 170214974 -83041609 + AluY SINE Alu 4 293 -18 1750 154 0 67 chr2 170214974 170215149 -83041434 + AluJo SINE Alu 123 308 -4 2042 141 3 0 chr2 170215155 170215446 -83041137 + AluSx SINE Alu 1 292 -20 258 297 82 51 chr2 170215446 170215604 -83040979 - L1MC4a LINE L1 -1965 5843 5670 185 154 26 0 chr2 170215992 170216031 -83040552 + (CATATA)n Simple_repeat Simple_repeat 2 41 0 265 310 103 0 chr2 170217054 170217141 -83039442 - MIR3 SINE MIR -104 104 9 310 413 75 0 chr2 170218059 170218219 -83038364 + L2 LINE L2 3101 3272 0 21 0 0 0 chr2 170218415 170218436 -83038147 + AT_rich Low_complexity Low_complexity 1 21 0 408 256 183 0 chr2 170220542 170220679 -83035904 - MIR SINE MIR -40 222 61 235 325 0 0 chr2 170221556 170221639 -83034944 + (TATATG)n Simple_repeat Simple_repeat 5 87 0 387 329 113 18 chr2 170221689 170221911 -83034672 + MIR SINE MIR 20 262 0 180 152 30 0 chr2 170221916 170221949 -83034634 + L2 LINE L2 3265 3298 -15 221 304 65 22 chr2 170222288 170222380 -83034203 + MIR3 SINE MIR 85 180 -28 1221 40 14 0 chr2 170222576 170222724 -83033859 - AluY SINE Alu -18 293 144 186 382 13 0 chr2 170223625 170223701 -83032882 + MIR3 SINE MIR 117 193 -15 379 285 41 0 chr2 170223762 170223885 -83032698 + MIR3 SINE MIR 75 202 -6 199 372 23 0 chr2 170224477 170224563 -83032020 - MIR SINE MIR 0 262 175 356 232 79 49 chr2 170224861 170225025 -83031558 - L1MC5 LINE L1 -175 7786 7618 300 219 10 10 chr2 170225029 170225125 -83031458 + L1ME3A LINE L1 2902 2997 -3149 739 245 82 106 chr2 170225128 170225834 -83030749 + L1ME3A LINE L1 3846 4534 -1612 243 0 0 0 chr2 170225925 170225952 -83030631 + (TG)n Simple_repeat Simple_repeat 2 28 0 1678 267 21 15 chr2 170226219 170226698 -83029885 + L1ME3A LINE L1 5655 6136 -34 883 263 82 23 chr2 170226738 170227175 -83029408 + HAL1 LINE L1 1272 1734 -773 461 317 111 29 chr2 170227185 170227723 -83028860 + MLT1G1 LTR MaLR 14 555 0 373 220 119 0 chr2 170228203 170228312 -83028271 + HAL1 LINE L1 2306 2427 -80 1281 213 38 35 chr2 170228666 170228980 -83027603 - L1MC3 LINE L1 -1181 6604 6290 1470 184 111 55 chr2 170228982 170229379 -83027204 + L1MC3 LINE L1 6588 7006 -779 1717 120 10 50 chr2 170229406 170229705 -83026878 + MER51A LTR ERV1 348 634 0 281 283 38 0 chr2 170229783 170229889 -83026694 + L1 LINE L1 4934 5043 -1103 261 57 0 0 chr2 170230608 170230643 -83025940 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5517 173 64 13 chr2 170232515 170233682 -83022901 + Tigger3b DNA MER2_type 1 1227 -4 5368 193 61 32 chr2 170233689 170234618 -83021965 - L1MCa LINE L1 -5114 1312 336 2140 125 112 20 chr2 170234618 170235010 -83021573 - MSTA LTR MaLR 0 428 1 5368 193 61 32 chr2 170235010 170235347 -83021236 - L1MCa LINE L1 -6090 336 10 186 118 0 0 chr2 170235653 170235687 -83020896 + (CA)n Simple_repeat Simple_repeat 1 34 0 512 220 66 25 chr2 170236409 170236650 -83019933 - L1M4 LINE L1 -3657 2489 2239 225 174 22 0 chr2 170237887 170237933 -83018650 + L1MC3 LINE L1 5923 5969 -1816 21 0 0 0 chr2 170238142 170238163 -83018420 + AT_rich Low_complexity Low_complexity 1 21 0 2543 40 0 0 chr2 170238605 170238906 -83017677 + AluY SINE Alu 1 301 -10 3460 164 18 0 chr2 170239807 170240423 -83016160 - L1 LINE L1 -1968 5138 4512 189 0 0 0 chr2 170240509 170240530 -83016053 + (TTA)n Simple_repeat Simple_repeat 1 21 0 3632 77 8 2 chr2 170240531 170241023 -83015560 - L1PA7 LINE L1 -18 6136 5642 2358 45 3 0 chr2 170241024 170241311 -83015272 + L1PA7 LINE L1 5371 5658 -496 * 5450 224 38 11 chr2 170241305 170242949 -83013634 - L1 LINE L1 -2561 4545 2854 1282 148 59 35 chr2 170242966 170243222 -83013361 - Tigger2a DNA MER2_type -172 262 1 2839 241 291 37 chr2 170243249 170245614 -83010969 - L1 LINE L1 -4172 2935 1 813 276 57 12 chr2 170245727 170245973 -83010610 + MIR SINE MIR 3 259 -3 240 250 143 27 chr2 170245977 170246089 -83010494 - HAL1 LINE L1 -3 2504 2380 318 263 166 14 chr2 170246581 170246798 -83009785 + Charlie7 DNA MER1_type 70 319 -2293 1873 249 119 28 chr2 170246841 170247116 -83009467 + Charlie7 DNA MER1_type 1490 1738 -874 2395 140 65 2 chr2 170247116 170247517 -83009066 - MSTA LTR MaLR -2 426 1 1873 249 119 28 chr2 170247517 170247863 -83008720 + Charlie7 DNA MER1_type 1738 2051 -561 2251 102 0 0 chr2 170247863 170248156 -83008427 + AluSx SINE Alu 1 293 -19 1873 249 119 28 chr2 170248156 170248551 -83008032 + Charlie7 DNA MER1_type 2051 2600 -12 250 313 83 0 chr2 170249693 170249789 -83006794 + MIR SINE MIR 109 212 -50 348 83 0 0 chr2 170250561 170250609 -83005974 + (TA)n Simple_repeat Simple_repeat 2 49 0 1014 213 0 11 chr2 170255966 170256149 -83000434 - MER5A DNA MER1_type -1 188 8 349 329 43 25 chr2 170256820 170256981 -82999602 - LTR16C LTR ERVL 0 491 328 678 207 64 0 chr2 170257955 170258118 -82998465 + FRAM SINE Alu 1 170 0 2210 131 0 0 chr2 170258159 170258472 -82998111 + AluSq SINE Alu 1 313 0 251 140 20 0 chr2 170259651 170259701 -82996882 + CT-rich Low_complexity Low_complexity 2 52 0 262 316 50 16 chr2 170260787 170261064 -82995519 - L1ME LINE L1 -271 5899 5612 1590 173 4 0 chr2 170261156 170261404 -82995179 - AluJo SINE Alu -63 249 1 940 191 0 0 chr2 170261804 170261961 -82994622 - AluSp SINE Alu -18 295 139 3724 96 0 4 chr2 170262300 170262813 -82993770 - MER9 LTR ERVK 0 511 1 32 86 0 0 chr2 170263648 170263729 -82992854 + AT_rich Low_complexity Low_complexity 1 81 0 313 263 0 0 chr2 170264104 170264184 -82992399 - MER116 DNA Mariner 0 80 1 208 321 132 19 chr2 170266551 170266657 -82989926 - L2 LINE L2 -936 2378 2261 21 0 0 0 chr2 170266803 170266824 -82989759 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 170268930 170268959 -82987624 + AT_rich Low_complexity Low_complexity 1 29 0 1990 118 31 3 chr2 170269327 170269648 -82986935 - MER6A DNA MER2_type -2 603 274 637 175 44 15 chr2 170269648 170269785 -82986798 - MER6A DNA MER2_type -461 144 4 3405 217 63 29 chr2 170269845 170271277 -82985306 - L1ME1 LINE L1 -5 6161 4680 1297 206 3 62 chr2 170271278 170271529 -82985054 + AluJo SINE Alu 1 234 -78 2380 57 0 20 chr2 170271529 170271828 -82984755 + AluY SINE Alu 1 293 -18 1297 206 3 62 chr2 170271828 170271867 -82984716 + AluJo SINE Alu 234 274 -38 746 270 20 8 chr2 170271872 170272124 -82984459 - L1ME1 LINE L1 -1449 4697 4443 230 73 24 0 chr2 170272150 170272191 -82984392 + (TA)n Simple_repeat Simple_repeat 1 42 0 1473 215 26 24 chr2 170272206 170272630 -82983953 - L1ME1 LINE L1 -1892 4254 3830 2776 216 53 22 chr2 170272642 170273352 -82983231 - L1MD2 LINE L1 -46 6707 5976 761 70 0 35 chr2 170273352 170273467 -82983116 + AluY SINE Alu 187 297 -14 824 276 52 23 chr2 170273533 170273881 -82982702 - L1MD2 LINE L1 -908 5632 5275 1016 229 45 93 chr2 170273977 170274310 -82982273 - L1MD2 LINE L1 -3388 3152 2853 4486 71 3 12 chr2 170274310 170274914 -82981669 - L1PA8 LINE L1 -2 6170 5572 1016 229 45 93 chr2 170274914 170275116 -82981467 - L1MD2 LINE L1 -3687 2853 2643 2764 228 83 19 chr2 170275137 170276155 -82980428 - L1MD2 LINE L1 -4321 2219 1136 1938 201 21 3 chr2 170276150 170276523 -82980060 - L1PBa LINE L1 -6483 380 1 * 1360 240 97 13 chr2 170276530 170277175 -82979408 - L1M3c LINE L1 -4690 2347 1600 297 0 0 0 chr2 170277175 170277208 -82979375 + (TC)n Simple_repeat Simple_repeat 2 34 0 1360 240 97 13 chr2 170277208 170277393 -82979190 - L1M3c LINE L1 -5437 1600 1432 2202 99 0 0 chr2 170277555 170277862 -82978721 - AluSg SINE Alu 0 307 1 283 312 0 30 chr2 170278592 170278739 -82977844 - L1M3c LINE L1 -5992 1045 2 718 261 50 18 chr2 170278878 170279158 -82977425 - L1ME LINE L1 -299 5822 5534 239 328 34 25 chr2 170280962 170281081 -82975502 - MER5A DNA MER1_type -27 162 43 239 339 28 9 chr2 170280978 170281087 -82975496 + MER5A DNA MER1_type 54 164 -25 548 263 82 47 chr2 170281369 170281601 -82974982 - MIR SINE MIR 0 262 23 431 320 97 58 chr2 170281695 170282677 -82973906 + L1ME LINE L1 41 1060 -5059 1424 171 0 45 chr2 170282876 170283163 -82973420 + AluJo SINE Alu 37 310 -2 2229 94 17 0 chr2 170283645 170283944 -82972639 - AluSp SINE Alu -9 304 1 238 281 0 0 chr2 170283944 170284008 -82972575 + MLT1I LTR MaLR 346 409 0 759 291 88 35 chr2 170284212 170285432 -82971151 + L1ME LINE L1 4368 5642 -505 243 0 0 0 chr2 170285448 170285475 -82971108 + (CA)n Simple_repeat Simple_repeat 2 28 0 16541 50 1 0 chr2 170285694 170287782 -82968801 + L1P LINE L1 2690 4780 -1366 9542 136 24 22 chr2 170287782 170288211 -82968372 - Tigger1 DNA MER2_type -813 1605 1178 2348 102 73 14 chr2 170288211 170288555 -82968028 - THE1B LTR MaLR 0 364 1 9542 136 24 22 chr2 170288555 170289224 -82967359 - Tigger1 DNA MER2_type -1240 1178 501 1931 173 0 0 chr2 170289224 170289531 -82967052 - AluSx SINE Alu -5 307 1 9542 136 24 22 chr2 170289531 170290033 -82966550 - Tigger1 DNA MER2_type -1917 501 1 320 309 230 21 chr2 170290037 170290228 -82966355 + MIR SINE MIR 16 246 -16 322 272 191 7 chr2 170290355 170290502 -82966081 + MER69A DNA AcHobo 4 177 0 634 202 0 0 chr2 170290719 170290833 -82965750 + FRAM SINE Alu 58 171 -5 1453 169 0 20 chr2 170291156 170291404 -82965179 - AluJb SINE Alu -69 243 1 757 278 86 43 chr2 170291580 170291636 -82964947 - LTR16C LTR ERVL 0 491 439 2130 119 0 0 chr2 170291636 170291944 -82964639 - AluSx SINE Alu 0 312 3 757 278 86 43 chr2 170291944 170292211 -82964372 - LTR16C LTR ERVL -52 439 154 610 148 20 0 chr2 170292471 170292572 -82964011 + U6 snRNA snRNA 1 103 -4 1371 101 14 0 chr2 170292582 170292791 -82963792 + L1MA2 LINE L1 6093 6304 0 2309 130 11 16 chr2 170294950 170295327 -82961256 + THE1C LTR MaLR 1 375 0 284 358 30 55 chr2 170295836 170296001 -82960582 - L2 LINE L2 -52 3220 3060 1238 244 43 40 chr2 170296325 170296698 -82959885 + MLT1B LTR MaLR 1 374 -16 411 305 228 4 chr2 170296993 170297252 -82959331 - Charlie7 DNA MER1_type -2191 421 105 426 257 0 0 chr2 170297381 170297486 -82959097 - L1 LINE L1 -1249 4897 4793 212 200 18 0 chr2 170297699 170297754 -82958829 + (TA)n Simple_repeat Simple_repeat 2 57 0 280 260 78 0 chr2 170298005 170298082 -82958501 - MIR3 SINE MIR -1 207 125 2084 149 22 8 chr2 170298908 170299264 -82957319 - MLT1A1 LTR MaLR 0 365 5 2447 71 0 10 chr2 170299318 170299629 -82956954 + AluY SINE Alu 1 308 -3 327 376 66 9 chr2 170300155 170300368 -82956215 + L1ME LINE L1 5479 5703 -418 21 82 0 0 chr2 170301464 170301513 -82955070 + AT_rich Low_complexity Low_complexity 1 49 0 1976 147 83 0 chr2 170304464 170304824 -82951759 + MLT1B LTR MaLR 1 390 0 49 60 0 0 chr2 170305777 170305861 -82950722 + AT_rich Low_complexity Low_complexity 1 84 0 503 256 30 77 chr2 170305862 170306030 -82950553 - MER63 DNA MER1_type -276 786 1 21 0 0 0 chr2 170306048 170306069 -82950514 + AT_rich Low_complexity Low_complexity 1 21 0 523 306 119 42 chr2 170306080 170306649 -82949934 + L1ME LINE L1 4362 4974 -1172 546 298 72 24 chr2 170307669 170307961 -82948622 + L1ME LINE L1 5318 5623 -2185 1056 269 55 60 chr2 170307967 170308402 -82948181 + LTR16A LTR ERVL 16 448 -2 395 258 50 13 chr2 170308405 170308564 -82948019 + L1ME LINE L1 5623 5787 -334 2471 142 41 14 chr2 170308717 170308855 -82947728 + MSTA LTR MaLR 3 136 -292 2357 129 5 24 chr2 170308855 170309226 -82947357 + THE1B LTR MaLR 1 364 0 2471 142 41 14 chr2 170309226 170309502 -82947081 + MSTA LTR MaLR 136 428 0 8468 175 24 43 chr2 170309502 170311185 -82945398 + MSTA-int LTR MaLR 1 1651 0 2619 126 28 14 chr2 170311185 170311607 -82944976 + MSTA LTR MaLR 1 428 0 187 340 117 10 chr2 170312243 170312346 -82944237 + MIR SINE MIR 20 133 -129 194 250 83 12 chr2 170312766 170312850 -82943733 + MIR SINE MIR 39 128 -80 195 218 0 0 chr2 170312864 170312919 -82943664 + (CATA)n Simple_repeat Simple_repeat 2 56 0 26 0 0 0 chr2 170313036 170313062 -82943521 + AT_rich Low_complexity Low_complexity 1 26 0 207 100 0 0 chr2 170313240 170313270 -82943313 + (TG)n Simple_repeat Simple_repeat 2 31 0 181 326 134 62 chr2 170313323 170313630 -82942953 - L2 LINE L2 0 3313 2985 263 314 0 12 chr2 170314767 170314853 -82941730 + GA-rich Low_complexity Low_complexity 5 89 0 328 306 41 54 chr2 170314906 170315053 -82941530 - MIR SINE MIR -77 185 41 276 30 0 0 chr2 170315398 170315431 -82941152 + (TG)n Simple_repeat Simple_repeat 2 34 0 23 33 0 0 chr2 170316182 170316212 -82940371 + AT_rich Low_complexity Low_complexity 1 30 0 579 256 6 6 chr2 170316735 170316899 -82939684 + MER103 DNA DNA 1 164 -2 335 311 115 7 chr2 170317239 170317387 -82939196 + L3 LINE CR1 1412 1575 -2 1393 201 62 27 chr2 170317526 170317864 -82938719 + MLT1A1 LTR MaLR 5 354 -11 21 82 0 0 chr2 170318180 170318229 -82938354 + AT_rich Low_complexity Low_complexity 1 49 0 2194 145 176 5 chr2 170319760 170320187 -82936396 - MER61D LTR ERV1 0 501 2 28 0 0 0 chr2 170320303 170320331 -82936252 + AT_rich Low_complexity Low_complexity 1 28 0 533 292 200 5 chr2 170321044 170321594 -82934989 - LTR50 LTR ERVL 0 683 27 25 51 0 0 chr2 170322280 170322319 -82934264 + AT_rich Low_complexity Low_complexity 1 39 0 267 265 238 27 chr2 170322342 170322489 -82934094 - MIR SINE MIR -56 206 29 771 266 52 8 chr2 170322711 170322959 -82933624 - MIR SINE MIR -1 261 3 2501 211 49 12 chr2 170323527 170324115 -82932468 + MER90 LTR ERV1 3 612 -2 2251 92 0 3 chr2 170324387 170324691 -82931892 + AluY SINE Alu 1 303 -8 21 0 0 0 chr2 170324748 170324769 -82931814 + AT_rich Low_complexity Low_complexity 1 21 0 2159 104 19 10 chr2 170324952 170325261 -82931322 + AluSx SINE Alu 1 312 0 225 94 0 0 chr2 170326316 170326348 -82930235 + (A)n Simple_repeat Simple_repeat 1 32 0 240 143 0 0 chr2 170326762 170326804 -82929779 + (T)n Simple_repeat Simple_repeat 1 42 0 360 259 177 6 chr2 170327149 170327307 -82929276 - MIR SINE MIR -10 252 68 196 333 78 39 chr2 170329490 170329619 -82926964 - MIR SINE MIR -2 260 127 554 298 107 18 chr2 170330204 170330429 -82926154 - MIR SINE MIR -15 247 3 611 335 43 13 chr2 170331811 170332044 -82924539 - MIR SINE MIR -21 241 2 189 74 0 0 chr2 170332318 170332345 -82924238 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 21 57 0 0 chr2 170333258 170333293 -82923290 + AT_rich Low_complexity Low_complexity 1 35 0 267 261 0 15 chr2 170333487 170333552 -82923031 - MIR SINE MIR -46 216 153 207 0 0 0 chr2 170333851 170333874 -82922709 + (ATATG)n Simple_repeat Simple_repeat 5 27 0 1888 183 4 5 chr2 170333874 170334358 -82922225 - L1MC/D LINE L1 -654 5588 5106 454 135 14 0 chr2 170334340 170334414 -82922169 + L1MC/D LINE L1 5630 5704 -655 * 446 349 57 78 chr2 170334898 170335093 -82921490 - L2 LINE L2 -338 2976 2779 777 148 0 0 chr2 170335093 170335228 -82921355 + L1MA7 LINE L1 6157 6291 0 446 349 57 78 chr2 170335228 170335714 -82920869 - L2 LINE L2 -535 2779 2309 418 315 154 7 chr2 170335728 170335877 -82920706 - MER5A DNA MER1_type -7 182 12 203 156 0 0 chr2 170335946 170335978 -82920605 + A-rich Low_complexity Low_complexity 5 36 0 189 0 0 0 chr2 170336455 170336476 -82920107 + (TTTTG)n Simple_repeat Simple_repeat 4 24 0 1762 191 62 37 chr2 170338585 170338989 -82917594 + MLT2D LTR ERVL 1 414 0 513 307 52 16 chr2 170339633 170339825 -82916758 - L3 LINE CR1 -7 1570 1372 279 93 0 0 chr2 170341864 170341907 -82914676 + (TG)n Simple_repeat Simple_repeat 2 44 0 279 0 0 0 chr2 170342242 170342273 -82914310 + (CAG)n Simple_repeat Simple_repeat 3 33 0 201 244 0 0 chr2 170342733 170342774 -82913809 + GA-rich Low_complexity Low_complexity 2 42 0 1951 234 95 67 chr2 170342793 170343852 -82912731 + L1MDa LINE L1 1013 2101 -4439 1520 299 131 33 chr2 170343857 170344736 -82911847 - L2 LINE L2 -253 3060 2108 209 296 222 9 chr2 170345050 170345158 -82911425 - MIR SINE MIR -50 212 82 236 146 36 36 chr2 170345758 170345813 -82910770 + L2 LINE L2 3250 3304 -9 361 254 51 29 chr2 170347427 170347565 -82909018 - LTR67 LTR ERVL 0 557 417 209 170 19 19 chr2 170347797 170347850 -82908733 + (TTAAA)n Simple_repeat Simple_repeat 5 57 0 22 35 0 0 chr2 170349453 170349482 -82907101 + AT_rich Low_complexity Low_complexity 1 29 0 28 86 0 0 chr2 170350392 170350462 -82906121 + AT_rich Low_complexity Low_complexity 1 70 0 405 248 0 68 chr2 170353633 170353750 -82902833 - MER94 DNA DNA -1 133 25 483 315 35 7 chr2 170353811 170353991 -82902592 - MIR SINE MIR -21 187 3 24 32 0 0 chr2 170354805 170354836 -82901747 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr2 170356488 170356511 -82900072 + AT_rich Low_complexity Low_complexity 1 23 0 180 111 0 0 chr2 170357131 170357158 -82899425 + (CATA)n Simple_repeat Simple_repeat 1 27 0 30 59 0 0 chr2 170357181 170357232 -82899351 + AT_rich Low_complexity Low_complexity 1 51 0 519 252 103 34 chr2 170357561 170357584 -82898999 + MER112 DNA MER1_type 10 30 -230 1986 200 58 11 chr2 170357584 170358030 -82898553 + MLT1C LTR MaLR 1 467 0 519 252 103 34 chr2 170358030 170358240 -82898343 + MER112 DNA MER1_type 30 259 -1 278 267 20 30 chr2 170358791 170358892 -82897691 - MLT1G1 LTR MaLR -13 582 483 206 311 0 22 chr2 170360366 170360456 -82896127 + A-rich Low_complexity Low_complexity 2 89 0 1133 314 90 11 chr2 170360734 170361701 -82894882 + L1ME3A LINE L1 2470 3471 -3069 1708 158 40 0 chr2 170361727 170362094 -82894489 + AluY SINE Alu 1 378 0 311 277 183 0 chr2 170362094 170362231 -82894352 + L1ME3A LINE L1 4139 4300 -2240 429 314 20 20 chr2 170362298 170362543 -82894040 + L1ME3A LINE L1 5317 5561 -979 1750 234 137 36 chr2 170362699 170363524 -82893059 + L1ME3A LINE L1 5648 6555 -9 323 284 30 71 chr2 170363665 170363834 -82892749 - MIR SINE MIR -21 241 80 23 33 0 0 chr2 170365055 170365085 -82891498 + AT_rich Low_complexity Low_complexity 1 30 0 439 239 0 18 chr2 170365438 170365551 -82891032 + MIR SINE MIR 152 262 0 188 326 0 0 chr2 170365760 170365809 -82890774 - L2 LINE L2 -15 3298 3250 250 333 73 13 chr2 170366891 170367041 -82889542 - L2 LINE L2 0 3313 3155 203 373 86 38 chr2 170367315 170367524 -82889059 - L2 LINE L2 -482 2832 2614 369 357 20 20 chr2 170367758 170367957 -82888626 - MIR SINE MIR -60 202 4 223 250 188 0 chr2 170367973 170368053 -82888530 - L2 LINE L2 -952 2362 2268 250 389 28 9 chr2 170368265 170368373 -82888210 + L2 LINE L2 2990 3099 -173 551 278 85 22 chr2 170368792 170369015 -82887568 + MIR SINE MIR 2 238 -24 180 111 0 0 chr2 170369025 170369052 -82887531 + (CTG)n Simple_repeat Simple_repeat 3 29 0 306 175 0 0 chr2 170369369 170369381 -82887202 + L1MC3 LINE L1 7041 7052 -733 270 0 0 0 chr2 170369381 170369411 -82887172 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 306 175 0 0 chr2 170369411 170369455 -82887128 + L1MC3 LINE L1 7051 7097 -688 328 320 0 0 chr2 170369455 170369552 -82887031 + MLT1F1 LTR MaLR 35 131 -436 3054 170 24 5 chr2 170369554 170370135 -82886448 + L1MC3 LINE L1 7194 7785 0 1093 187 10 0 chr2 170370131 170370340 -82886243 + L1MC3 LINE L1 7575 7785 0 * 286 275 25 0 chr2 170373024 170373104 -82883479 + CT-rich Low_complexity Low_complexity 3 84 0 834 338 113 39 chr2 170374374 170375126 -82881457 + L2 LINE L2 1906 2713 -601 824 266 42 13 chr2 170375221 170375520 -82881063 + L2 LINE L2 2492 2867 -447 453 241 14 48 chr2 170375571 170375710 -82880873 + MIR SINE MIR 39 175 -67 25 31 0 0 chr2 170376048 170376080 -82880503 + AT_rich Low_complexity Low_complexity 1 32 0 614 242 19 13 chr2 170376252 170376409 -82880174 + MIR SINE MIR 48 205 -57 220 250 0 0 chr2 170376907 170376947 -82879636 + (CGTG)n Simple_repeat Simple_repeat 4 43 0 1008 314 91 36 chr2 170377674 170378432 -82878151 - L2 LINE L2 0 3313 2494 288 178 41 41 chr2 170378929 170379002 -82877581 - MLT1K LTR MaLR -166 422 350 578 277 90 68 chr2 170379395 170379838 -82876745 + MLT1H LTR MaLR 1 525 -24 247 362 87 18 chr2 170380190 170380524 -82876059 - L2 LINE L2 -1211 2103 1747 408 298 81 12 chr2 170380731 170380892 -82875691 - MIR SINE MIR -55 207 36 2067 121 0 0 chr2 170381155 170381471 -82875112 - AluSx SINE Alu 0 316 1 23 0 0 0 chr2 170381668 170381691 -82874892 + AT_rich Low_complexity Low_complexity 1 23 0 10125 209 72 53 chr2 170381879 170386985 -82869598 - L1MC1 LINE L1 0 6613 1048 919 186 6 6 chr2 170386985 170387162 -82869421 - FRAM SINE Alu 0 176 1 10125 209 72 53 chr2 170387162 170388203 -82868380 - L1MC1 LINE L1 -5565 1048 28 2390 49 3 10 chr2 170388223 170388527 -82868056 - AluY SINE Alu -9 302 1 1955 139 0 0 chr2 170388572 170388846 -82867737 - AluSx SINE Alu -38 274 1 316 260 41 48 chr2 170389062 170389208 -82867375 - LTR67 LTR ERVL -15 542 398 205 259 0 52 chr2 170389621 170389679 -82866904 + L2 LINE L2 3214 3268 -4 1528 105 41 0 chr2 170389930 170390149 -82866434 - MER30 DNA MER1_type 0 230 3 321 289 78 14 chr2 170391321 170391463 -82865120 - L2 LINE L2 -7 3306 3156 2849 3 0 0 chr2 170393017 170393327 -82863256 + AluYa5 SINE Alu 1 310 -1 1426 132 21 113 chr2 170393329 170393655 -82862928 + AluYb8 SINE Alu 1 296 -22 26 0 0 0 chr2 170393655 170393681 -82862902 + AT_rich Low_complexity Low_complexity 1 26 0 562 334 61 2 chr2 170393755 170393997 -82862586 + L1ME LINE L1 5443 5706 -415 3037 268 57 68 chr2 170394060 170394768 -82861815 - L2 LINE L2 -99 3214 2500 592 98 0 0 chr2 170394768 170394850 -82861733 + L1PA16 LINE L1 6076 6157 -9 3037 268 57 68 chr2 170394850 170395609 -82860974 - L2 LINE L2 -813 2500 1777 2098 105 31 0 chr2 170396132 170396426 -82860157 + AluSq SINE Alu 1 303 -10 219 170 0 0 chr2 170396591 170396638 -82859945 + A-rich Low_complexity Low_complexity 1 47 0 683 311 32 9 chr2 170396988 170397207 -82859376 - MIR SINE MIR -24 238 15 27 29 0 0 chr2 170397777 170397811 -82858772 + AT_rich Low_complexity Low_complexity 1 34 0 252 0 0 0 chr2 170399562 170399590 -82856993 + (CA)n Simple_repeat Simple_repeat 2 29 0 6391 74 10 6 chr2 170399725 170401173 -82855410 - L1PA8A LINE L1 -6 6125 4675 1851 184 9 11 chr2 170401522 170401870 -82854713 - MER7A DNA MER2_type 0 346 2 234 319 77 11 chr2 170402227 170402318 -82854265 + L2 LINE L2 3164 3260 -12 21 0 0 0 chr2 170402680 170402701 -82853882 + AT_rich Low_complexity Low_complexity 1 21 0 243 208 19 0 chr2 170403289 170403342 -82853241 + (TATATG)n Simple_repeat Simple_repeat 2 55 0 2391 74 0 3 chr2 170403434 170403732 -82852851 + AluY SINE Alu 1 297 -14 25 31 0 0 chr2 170403775 170403807 -82852776 + AT_rich Low_complexity Low_complexity 1 32 0 5161 134 19 12 chr2 170403821 170405832 -82850751 - L1PA16 LINE L1 0 6166 4110 477 298 157 28 chr2 170406562 170406867 -82849716 - L2 LINE L2 -188 3125 2861 279 0 0 0 chr2 170406867 170406898 -82849685 + (TG)n Simple_repeat Simple_repeat 1 31 0 477 298 157 28 chr2 170406898 170407079 -82849504 - L2 LINE L2 -452 2861 2530 318 364 16 8 chr2 170408409 170408538 -82848045 - MER5A DNA MER1_type -3 186 57 243 274 14 0 chr2 170408576 170408649 -82847934 - MER116 DNA Mariner -6 74 1 540 360 35 26 chr2 170410183 170410494 -82846089 + L3 LINE CR1 1263 1576 -1 186 71 0 0 chr2 170410620 170410648 -82845935 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 209 154 39 0 chr2 170411080 170411132 -82845451 + A-rich Low_complexity Low_complexity 1 54 0 420 134 67 0 chr2 170412462 170412596 -82843987 + (TA)n Simple_repeat Simple_repeat 1 143 0 1802 158 53 0 chr2 170412972 170413135 -82843448 - AluSx SINE Alu -13 299 113 438 20 0 0 chr2 170413135 170413186 -82843397 + (TG)n Simple_repeat Simple_repeat 2 52 0 1802 158 53 0 chr2 170413186 170413306 -82843277 - AluSx SINE Alu -199 113 1 23 0 0 0 chr2 170414196 170414219 -82842364 + AT_rich Low_complexity Low_complexity 1 23 0 328 337 49 54 chr2 170414340 170414524 -82842059 + MIR SINE MIR 20 151 -57 471 228 82 54 chr2 170415042 170415226 -82841357 + L1MC5 LINE L1 7725 7913 -48 21 0 0 0 chr2 170415226 170415247 -82841336 + AT_rich Low_complexity Low_complexity 1 21 0 253 273 43 122 chr2 170417923 170418062 -82838521 - MIR3 SINE MIR -26 182 55 225 0 0 0 chr2 170418819 170418844 -82837739 + (CA)n Simple_repeat Simple_repeat 2 26 0 958 291 72 42 chr2 170419068 170419515 -82837068 - LTR16B LTR ERVL 0 464 5 21 0 0 0 chr2 170419706 170419727 -82836856 + AT_rich Low_complexity Low_complexity 1 21 0 25 51 0 0 chr2 170420295 170420334 -82836249 + AT_rich Low_complexity Low_complexity 1 39 0 405 248 0 68 chr2 170420912 170421029 -82835554 - MER94 DNA DNA -1 133 25 496 315 35 7 chr2 170421090 170421270 -82835313 - MIR SINE MIR -21 187 3 24 32 0 0 chr2 170422084 170422115 -82834468 + AT_rich Low_complexity Low_complexity 1 31 0 354 208 104 10 chr2 170423422 170423518 -82833065 + L1ME4a LINE L1 6008 6112 -9 449 357 32 13 chr2 170424059 170424216 -82832367 + MER91A DNA MER1_type 2 161 -35 248 322 0 0 chr2 170424254 170424313 -82832270 + MER91A DNA MER1_type 132 190 0 256 290 50 0 chr2 170426018 170426118 -82830465 - MIR SINE MIR -122 140 36 420 283 185 6 chr2 170426635 170426808 -82829775 + MIR SINE MIR 20 223 -39 224 361 48 12 chr2 170426859 170426942 -82829641 + L2 LINE L2 3143 3228 -44 775 288 103 23 chr2 170426977 170427366 -82829217 + MLT1J1 LTR MaLR 16 435 -11 602 325 81 0 chr2 170427868 170428102 -82828481 + MIR SINE MIR 1 253 -9 725 266 14 14 chr2 170429442 170429656 -82826927 + LTR33 LTR ERVL 305 518 -3 2920 195 12 28 chr2 170429860 170429902 -82826681 - MLT2B3 LTR ERVL 0 554 513 297 0 0 0 chr2 170429902 170429935 -82826648 + (TA)n Simple_repeat Simple_repeat 2 34 0 * 549 30 0 0 chr2 170429934 170430001 -82826582 + (GA)n Simple_repeat Simple_repeat 2 68 0 2920 195 12 28 chr2 170429935 170430521 -82826062 - MLT2B3 LTR ERVL -41 513 1 404 243 19 39 chr2 170430659 170430762 -82825821 + MIR SINE MIR 30 130 -78 366 23 0 0 chr2 170432318 170432361 -82824222 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 525 314 27 21 chr2 170432887 170433293 -82823290 + MLT1K LTR MaLR 136 588 0 750 294 44 12 chr2 170433323 170433575 -82823008 + MIR SINE MIR 3 262 0 248 271 17 0 chr2 170434261 170434320 -82822263 + L2 LINE L2 3211 3270 -2 2132 123 0 0 chr2 170435277 170435579 -82821004 + AluY SINE Alu 1 302 -9 193 191 0 64 chr2 170435962 170435995 -82820588 + MIR SINE MIR 184 213 -49 502 248 19 9 chr2 170435995 170436100 -82820483 + MER5B DNA MER1_type 1 106 -72 419 256 101 59 chr2 170436096 170436315 -82820268 + L2 LINE L2 162 389 -2925 * 517 218 28 42 chr2 170436252 170436394 -82820189 - MER91B DNA MER1_type -13 177 38 1158 271 298 7 chr2 170436414 170437119 -82819464 + L2 LINE L2 334 1243 -2071 1002 174 0 0 chr2 170437125 170437280 -82819303 - AluJb SINE Alu -24 288 134 740 289 184 18 chr2 170437281 170437624 -82818959 + L2 LINE L2 1242 1641 -1673 592 218 52 17 chr2 170437656 170437830 -82818753 + L1MC4 LINE L1 7721 7900 -142 200 163 23 0 chr2 170437832 170437875 -82818708 + GA-rich Low_complexity Low_complexity 1 44 0 3108 175 4 4 chr2 170437910 170438419 -82818164 - MLT2B1 LTR ERVL -8 512 4 254 258 129 30 chr2 170439316 170439448 -82817135 - MER117 DNA MER1_type 0 197 53 423 237 70 64 chr2 170439670 170439826 -82816757 - MIR3 SINE MIR -21 187 31 187 219 57 0 chr2 170439921 170440026 -82816557 + GA-rich Low_complexity Low_complexity 5 115 0 279 245 0 0 chr2 170441215 170441309 -82815274 + G-rich Low_complexity Low_complexity 1 94 0 564 258 12 68 chr2 170442302 170442465 -82814118 + MER96 DNA MER1_type? 8 161 -14 2148 133 0 0 chr2 170442743 170443045 -82813538 + AluSg SINE Alu 2 303 -7 272 314 106 14 chr2 170443266 170443623 -82812960 + L1M4c LINE L1 1174 1563 -4821 2831 217 15 31 chr2 170443677 170444391 -82812192 - Cheshire DNA MER1_type -1654 766 64 242 247 12 12 chr2 170445164 170445327 -82811256 + GA-rich Low_complexity Low_complexity 1 163 0 757 132 0 137 chr2 170445724 170445928 -82810655 - L1MA10 LINE L1 -10 6324 6149 1117 213 130 108 chr2 170446137 170446667 -82809916 + MLT1F LTR MaLR 1 542 0 25 0 0 0 chr2 170448467 170448492 -82808091 + AT_rich Low_complexity Low_complexity 1 25 0 450 36 0 0 chr2 170448529 170448585 -82807998 + (CA)n Simple_repeat Simple_repeat 1 56 0 180 77 0 0 chr2 170448585 170448611 -82807972 + (GA)n Simple_repeat Simple_repeat 1 26 0 259 174 0 0 chr2 170448619 170448665 -82807918 + MADE1 DNA Mariner 35 80 0 369 371 129 22 chr2 170448825 170449509 -82807074 - L2 LINE L2 -338 2976 2220 202 241 35 0 chr2 170450425 170450483 -82806100 + GA-rich Low_complexity Low_complexity 5 64 0 21 36 0 0 chr2 170450676 170450704 -82805879 + AT_rich Low_complexity Low_complexity 1 28 0 185 219 0 16 chr2 170452163 170452227 -82804356 + CT-rich Low_complexity Low_complexity 2 64 0 1850 130 11 0 chr2 170452898 170453160 -82803423 - AluSp SINE Alu -45 268 4 1211 199 75 53 chr2 170454055 170454337 -82802246 + AluJo SINE Alu 6 293 -19 195 220 0 0 chr2 170455261 170455311 -82801272 + (CA)n Simple_repeat Simple_repeat 2 51 0 2048 130 0 3 chr2 170455341 170455633 -82800950 + AluSx SINE Alu 1 291 -21 447 78 0 0 chr2 170455633 170455697 -82800886 + (GGGGA)n Simple_repeat Simple_repeat 1 64 0 642 21 21 21 chr2 170455698 170455791 -82800792 + (GAAA)n Simple_repeat Simple_repeat 4 96 0 660 291 64 30 chr2 170455806 170456040 -82800543 + MIR SINE MIR 8 249 -13 256 326 23 0 chr2 170456276 170456362 -82800221 + MIR SINE MIR 61 148 -60 5048 66 158 6 chr2 170457232 170457949 -82798634 + LTR12 LTR ERV1 1 826 0 207 69 0 0 chr2 170458062 170458091 -82798492 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 2081 116 0 0 chr2 170458095 170458371 -82798212 - AluSg SINE Alu -34 276 1 292 375 132 0 chr2 170458750 170458894 -82797689 - MER91A DNA MER1_type -16 180 18 23 0 0 0 chr2 170459129 170459152 -82797431 + AT_rich Low_complexity Low_complexity 1 23 0 221 352 88 16 chr2 170461160 170461285 -82795298 - L2 LINE L2 -6 3266 3133 294 29 0 0 chr2 170462435 170462470 -82794113 + (GA)n Simple_repeat Simple_repeat 2 36 0 216 0 0 0 chr2 170465971 170465995 -82790588 + (A)n Simple_repeat Simple_repeat 1 24 0 894 296 128 22 chr2 170466049 170466370 -82790213 - L2 LINE L2 -5 3308 2954 383 350 43 12 chr2 170466875 170467038 -82789545 - MIR3 SINE MIR -18 190 23 197 239 0 0 chr2 170468291 170468337 -82788246 + L2 LINE L2 3268 3313 0 212 161 16 32 chr2 170469298 170469360 -82787223 + (TATAA)n Simple_repeat Simple_repeat 5 65 0 387 0 0 0 chr2 170471132 170471175 -82785408 + (TG)n Simple_repeat Simple_repeat 2 44 0 183 302 32 32 chr2 170472149 170472212 -82784371 + L2 LINE L2 3242 3304 -9 303 28 0 0 chr2 170473117 170473153 -82783430 + (TG)n Simple_repeat Simple_repeat 2 37 0 251 221 12 0 chr2 170473755 170473841 -82782742 + CT-rich Low_complexity Low_complexity 2 88 0 195 100 0 0 chr2 170473844 170473874 -82782709 + (CA)n Simple_repeat Simple_repeat 2 31 0 207 162 0 0 chr2 170474767 170474804 -82781779 + A-rich Low_complexity Low_complexity 1 37 0 26 64 0 0 chr2 170475051 170475098 -82781485 + AT_rich Low_complexity Low_complexity 1 47 0 22 0 0 0 chr2 170475357 170475379 -82781204 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 170477236 170477257 -82779326 + AT_rich Low_complexity Low_complexity 1 21 0 599 294 6 17 chr2 170477931 170478108 -82778475 - MIR3 SINE MIR -16 192 18 361 274 51 44 chr2 170478624 170478818 -82777765 + MIR SINE MIR 1 254 -8 252 86 0 0 chr2 170478819 170478854 -82777729 + (TTA)n Simple_repeat Simple_repeat 1 35 0 419 294 162 17 chr2 170479594 170479816 -82776767 - MIR SINE MIR -6 256 2 189 0 0 0 chr2 170479862 170479883 -82776700 + (CA)n Simple_repeat Simple_repeat 2 22 0 304 337 44 17 chr2 170479933 170480114 -82776469 - L2 LINE L2 -1369 1945 1760 22 0 0 0 chr2 170483749 170483771 -82772812 + AT_rich Low_complexity Low_complexity 1 22 0 731 198 22 44 chr2 170483791 170483973 -82772610 - L1MD2 LINE L1 -39 6320 6143 568 280 45 72 chr2 170484640 170484904 -82771679 - MIR SINE MIR -4 258 2 6212 93 47 13 chr2 170485110 170486157 -82770426 - L1PA13 LINE L1 -3 6160 5095 1862 140 3 25 chr2 170487122 170487407 -82769176 + AluJb SINE Alu 1 279 -33 216 0 0 0 chr2 170487409 170487433 -82769150 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1792 119 0 4 chr2 170488056 170488307 -82768276 + AluSc SINE Alu 44 293 -16 312 183 50 8 chr2 170488617 170488737 -82767846 + (TA)n Simple_repeat Simple_repeat 2 126 0 243 344 74 33 chr2 170489071 170489193 -82767390 + MIR3 SINE MIR 28 154 -54 321 345 68 17 chr2 170489414 170489591 -82766992 - MIR SINE MIR -2 260 75 2035 114 30 0 chr2 170491830 170492004 -82764579 - AluSx SINE Alu -5 307 119 438 20 0 0 chr2 170492004 170492055 -82764528 + (TG)n Simple_repeat Simple_repeat 2 52 0 2035 114 30 0 chr2 170492055 170492177 -82764406 - AluSx SINE Alu -193 119 2 303 315 232 11 chr2 170493225 170493406 -82763177 + MIR SINE MIR 28 248 -14 1112 301 97 93 chr2 170493648 170495234 -82761349 + L2 LINE L2 1331 2922 -392 1027 107 0 29 chr2 170495333 170495473 -82761110 + AluSq/x SINE Alu 1 136 -177 2166 80 0 0 chr2 170495473 170495735 -82760848 + AluSg SINE Alu 1 262 -48 597 291 63 5 chr2 170495751 170495940 -82760643 + MIR SINE MIR 63 262 0 200 246 0 35 chr2 170496174 170496231 -82760352 + L2 LINE L2 2917 2971 -301 2167 113 0 7 chr2 170496747 170497047 -82759536 + AluSx SINE Alu 11 308 -4 686 209 109 109 chr2 170498202 170498532 -82758051 - MLT1K LTR MaLR -34 554 225 272 232 37 37 chr2 170498591 170498673 -82757910 + MIR SINE MIR 4 85 -177 279 322 9 61 chr2 170498677 170498792 -82757791 - MLT1K LTR MaLR -367 221 113 215 390 0 0 chr2 170498970 170499047 -82757536 + L2 LINE L2 3111 3187 -85 1952 131 80 14 chr2 170501914 170502266 -82754317 + THE1C LTR MaLR 1 375 0 621 186 18 9 chr2 170502269 170502382 -82754201 - L2 LINE L2 -5 3308 3195 7882 121 14 3 chr2 170502456 170504348 -82752235 + L1PA10 LINE L1 4068 5974 -194 31266 112 11 58 chr2 170504358 170510818 -82745765 + L1PA7 LINE L1 12 6154 0 1399 106 0 42 chr2 170510818 170511035 -82745548 + L1PA10 LINE L1 5959 6166 -2 6271 144 31 8 chr2 170511891 170513104 -82743479 - L1MA3 LINE L1 -8 6297 5113 236 30 30 0 chr2 170513104 170513137 -82743446 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 6271 144 31 8 chr2 170513137 170513463 -82743120 - L1MA3 LINE L1 -1192 5113 4796 193 0 94 0 chr2 170513463 170513495 -82743088 + T-rich Low_complexity Low_complexity 2 36 0 6271 144 31 8 chr2 170513495 170514069 -82742514 - L1MA3 LINE L1 -1509 4796 4135 361 65 5 39 chr2 170514373 170514451 -82742132 + Alu SINE Alu 261 308 0 1651 108 0 0 chr2 170514462 170514675 -82741908 + AluSx SINE Alu 4 216 -96 37 86 0 0 chr2 170514754 170514847 -82741736 + AT_rich Low_complexity Low_complexity 1 93 0 2438 75 0 0 chr2 170515091 170515386 -82741197 + AluY SINE Alu 1 295 -16 2149 103 0 0 chr2 170515391 170515663 -82740920 + AluSx SINE Alu 4 275 -37 450 0 0 0 chr2 170515667 170515717 -82740866 + (TAAAA)n Simple_repeat Simple_repeat 1 50 0 262 291 23 23 chr2 170515752 170515838 -82740745 - L2 LINE L2 -2 3270 3185 284 252 144 27 chr2 170515894 170516005 -82740578 - MIR SINE MIR -50 212 89 23 0 0 0 chr2 170516672 170516695 -82739888 + AT_rich Low_complexity Low_complexity 1 23 0 634 342 45 4 chr2 170517299 170517542 -82739041 + MIR SINE MIR 10 262 0 396 0 0 0 chr2 170518251 170518295 -82738288 + (CA)n Simple_repeat Simple_repeat 2 45 0 325 303 17 8 chr2 170520214 170520333 -82736250 + L2 LINE L2 3152 3271 -42 1637 172 33 33 chr2 170520333 170520694 -82735889 - MLT1A1 LTR MaLR 0 365 5 21 95 0 0 chr2 170520727 170520790 -82735793 + AT_rich Low_complexity Low_complexity 1 63 0 1908 149 3 7 chr2 170520938 170521234 -82735349 + AluSx SINE Alu 1 295 -17 369 0 0 0 chr2 170522113 170522154 -82734429 + (CA)n Simple_repeat Simple_repeat 2 42 0 581 309 0 12 chr2 170522966 170523128 -82733455 - LTR33 LTR ERVL -360 161 2 483 365 147 14 chr2 170523150 170523586 -82732997 - L2 LINE L2 -955 2359 1866 733 285 85 4 chr2 170524298 170524533 -82732050 + MIR SINE MIR 2 255 -7 212 351 105 18 chr2 170524529 170524700 -82731883 - L2 LINE L2 -1589 1725 1540 * 2334 97 3 0 chr2 170524760 170525060 -82731523 + AluSx SINE Alu 1 301 -11 1307 237 56 0 chr2 170525143 170525413 -82731170 + AluJo SINE Alu 1 285 -17 28 0 0 0 chr2 170525422 170525450 -82731133 + AT_rich Low_complexity Low_complexity 1 28 0 203 147 0 0 chr2 170525509 170525543 -82731040 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 2014 149 39 0 chr2 170526406 170526741 -82729842 + MER7A DNA MER2_type 1 346 0 710 282 31 9 chr2 170526854 170527081 -82729502 + MIR SINE MIR 2 233 -29 805 285 193 18 chr2 170527793 170528264 -82728319 + MLT1G1 LTR MaLR 1 595 0 603 314 106 36 chr2 170528344 170528771 -82727812 + L2 LINE L2 2770 3233 -80 225 0 0 0 chr2 170528777 170528802 -82727781 + (T)n Simple_repeat Simple_repeat 1 25 0 189 277 231 0 chr2 170528803 170528868 -82727715 + L2 LINE L2 3189 3268 -4 9883 191 34 7 chr2 170528889 170531237 -82725346 - L1PA13 LINE L1 -3 6160 3721 252 0 0 0 chr2 170531237 170531265 -82725318 + (TTTTG)n Simple_repeat Simple_repeat 5 32 0 9883 191 34 7 chr2 170531265 170531797 -82724786 - L1PA13 LINE L1 -2442 3721 3205 772 126 0 0 chr2 170531814 170531933 -82724650 + AluY SINE Alu 192 310 -1 1645 199 19 29 chr2 170531946 170531970 -82724613 - L1PA13 LINE L1 -2938 3208 3185 1721 173 17 30 chr2 170531970 170532146 -82724437 - AluSx SINE Alu -14 298 126 381 43 0 0 chr2 170532146 170532193 -82724390 + (TG)n Simple_repeat Simple_repeat 2 48 0 1721 173 17 30 chr2 170532193 170532317 -82724266 - AluSx SINE Alu -186 126 2 1645 199 19 29 chr2 170532317 170532704 -82723879 - L1PA13 LINE L1 -2961 3185 2801 1933 93 0 23 chr2 170532715 170532974 -82723609 - AluY SINE Alu -7 304 52 591 187 8 21 chr2 170533422 170533555 -82723028 + L1M4 LINE L1 5469 5595 -579 * 3679 195 68 74 chr2 170533531 170533697 -82722886 + L1MB4 LINE L1 4892 5057 -1123 234 33 0 4 chr2 170533697 170533744 -82722839 + Alu SINE Alu 264 301 0 3679 195 68 74 chr2 170533744 170533866 -82722717 + L1MB4 LINE L1 5057 5178 -1002 1888 182 0 3 chr2 170533866 170534174 -82722409 - AluSx SINE Alu -5 307 1 3679 195 68 74 chr2 170534174 170535132 -82721451 + L1MB4 LINE L1 5178 6180 0 2283 224 41 29 chr2 170535127 170535784 -82720799 + L1M4 LINE L1 2489 3153 -2993 * 1285 257 59 11 chr2 170536366 170536821 -82719762 - L1ME3A LINE L1 -208 5962 5486 811 31 15 31 chr2 170536857 170536987 -82719596 + (TTTC)n Simple_repeat Simple_repeat 3 130 0 745 246 99 65 chr2 170536989 170537288 -82719295 - L1ME3A LINE L1 -968 5178 4858 1626 157 26 46 chr2 170537288 170537422 -82719161 + AluJb SINE Alu 1 136 -176 2092 127 0 0 chr2 170537422 170537735 -82718848 + AluSx SINE Alu 1 313 0 1626 157 26 46 chr2 170537735 170537905 -82718678 + AluJb SINE Alu 136 300 -12 745 246 99 65 chr2 170537905 170538039 -82718544 - L1ME3A LINE L1 -1288 4858 4730 796 267 6 0 chr2 170538063 170538235 -82718348 - MER45A DNA AcHobo -1 177 5 878 196 22 6 chr2 170538249 170538428 -82718155 + MER58B DNA MER1_type 158 339 -2 229 365 35 0 chr2 170538454 170538569 -82718014 - L2 LINE L2 -213 3059 2941 309 240 10 60 chr2 170540287 170540387 -82716196 - MIR SINE MIR -89 173 79 243 274 293 3 chr2 170540649 170540830 -82715753 - MIR SINE MIR 0 262 31 1239 270 96 73 chr2 170541296 170541592 -82714991 + L2 LINE L2 2204 2492 -821 606 231 8 0 chr2 170541592 170541722 -82714861 - FLAM_A SINE Alu -2 131 1 1239 270 96 73 chr2 170541722 170542442 -82714141 + L2 LINE L2 2492 3306 -7 2547 149 34 12 chr2 170542559 170543063 -82713520 + L1MA7 LINE L1 5777 6291 0 2257 108 7 0 chr2 170543104 170543401 -82713182 + AluSp SINE Alu 1 299 -14 188 283 0 22 chr2 170544112 170544158 -82712425 + MIR SINE MIR 79 123 -139 457 233 17 9 chr2 170544627 170544743 -82711840 + MER5A DNA MER1_type 2 118 -71 409 330 105 22 chr2 170544855 170545026 -82711557 - MER102a DNA MER1_type -1089 328 126 1921 129 44 72 chr2 170545026 170545412 -82711171 + THE1C LTR MaLR 1 375 0 409 330 105 22 chr2 170545412 170545507 -82711076 - MER102a DNA MER1_type -1291 126 40 778 285 34 38 chr2 170545507 170545770 -82710813 - L2 LINE L2 -379 2935 2674 912 293 277 14 chr2 170545916 170546605 -82709978 - L3 LINE CR1 -89 1488 619 418 345 7 0 chr2 170546637 170546782 -82709801 - MER117 DNA MER1_type -33 164 19 1857 147 3 3 chr2 170546963 170547249 -82709334 - AluJb SINE Alu -26 286 1 215 389 28 28 chr2 170547426 170547570 -82709013 - L2 LINE L2 0 3313 3170 1589 185 31 10 chr2 170547587 170547879 -82708704 + AluJo SINE Alu 1 298 -14 26 0 0 0 chr2 170547879 170547905 -82708678 + AT_rich Low_complexity Low_complexity 1 26 0 520 342 123 32 chr2 170548193 170548664 -82707919 - L2 LINE L2 -555 2759 2246 3232 201 65 30 chr2 170548977 170549804 -82706779 - L1MB8 LINE L1 -1 6675 5820 1037 204 47 55 chr2 170549804 170550281 -82706302 - MLT1F1 LTR MaLR 0 567 1 2191 206 98 21 chr2 170550281 170550583 -82706000 - L1MB8 LINE L1 -820 5824 5547 2359 82 3 0 chr2 170550583 170550877 -82705706 - AluY SINE Alu -16 295 1 2191 206 98 21 chr2 170550877 170551228 -82705355 - L1MB8 LINE L1 -1097 5547 5121 3392 244 36 55 chr2 170551233 170552350 -82704233 - L1MB8 LINE L1 -2776 3868 2731 228 67 0 0 chr2 170552350 170552380 -82704203 + (TG)n Simple_repeat Simple_repeat 1 30 0 1262 208 68 4 chr2 170552385 170552649 -82703934 - AluJb SINE Alu -30 282 2 3392 244 36 55 chr2 170552649 170553346 -82703237 - L1MB8 LINE L1 -3917 2727 2101 1421 257 91 60 chr2 170553345 170553949 -82702634 - L1MB8 LINE L1 -4782 1864 1280 * 2221 110 7 0 chr2 170553949 170554240 -82702343 - AluSc SINE Alu -16 293 1 1421 257 91 60 chr2 170554240 170554347 -82702236 - L1MB8 LINE L1 -5366 1280 1178 210 37 0 0 chr2 170554347 170554374 -82702209 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1421 257 91 60 chr2 170554374 170554561 -82702022 - L1MB8 LINE L1 -5468 1178 937 233 243 27 54 chr2 170554681 170554755 -82701828 - L1MB8 LINE L1 -5662 880 809 429 192 0 0 chr2 170555378 170555451 -82701132 + Tigger2 DNA MER2_type 1 73 -2645 911 220 6 17 chr2 170555486 170555663 -82700920 - MER8 DNA MER2_type -64 175 1 1779 184 0 16 chr2 170556604 170556914 -82699669 - AluJb SINE Alu -3 309 5 369 0 0 0 chr2 170556982 170557023 -82699560 + (CA)n Simple_repeat Simple_repeat 2 42 0 2248 91 3 0 chr2 170557035 170557320 -82699263 - AluSq SINE Alu -27 286 1 453 237 0 18 chr2 170557355 170557469 -82699114 + Charlie8 DNA MER1_type 100 211 -2206 188 194 0 0 chr2 170557528 170557559 -82699024 + L3 LINE CR1 1543 1573 -4 512 247 67 36 chr2 170557833 170558027 -82698556 - MIR SINE MIR -14 248 49 27 29 0 0 chr2 170560142 170560176 -82696407 + AT_rich Low_complexity Low_complexity 1 34 0 21 36 0 0 chr2 170560485 170560513 -82696070 + AT_rich Low_complexity Low_complexity 1 28 0 1068 193 25 41 chr2 170561569 170561638 -82694945 + Charlie1 DNA MER1_type 1 70 -2691 2386 93 0 10 chr2 170561638 170561949 -82694634 - AluSp SINE Alu -5 308 1 1068 193 25 41 chr2 170561949 170562123 -82694460 + Charlie1 DNA MER1_type 70 240 -2521 418 309 58 38 chr2 170562548 170562779 -82693804 - MIR SINE MIR -26 236 4 207 297 83 55 chr2 170563259 170563404 -82693179 - MIR SINE MIR -111 151 3 234 312 80 16 chr2 170564028 170564153 -82692430 - MIR SINE MIR -62 200 68 225 225 155 14 chr2 170564267 170564338 -82692245 - MIR SINE MIR -16 246 166 202 246 15 15 chr2 170565993 170566058 -82690525 + CT-rich Low_complexity Low_complexity 3 67 0 43 56 0 0 chr2 170566598 170566669 -82689914 + AT_rich Low_complexity Low_complexity 1 71 0 207 0 0 0 chr2 170566875 170566898 -82689685 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1295 223 50 43 chr2 170567849 170568285 -82688298 - MLT1C LTR MaLR -9 458 13 784 130 8 0 chr2 170568799 170568922 -82687661 - L1PB4 LINE L1 -3 6153 6030 2171 114 0 3 chr2 170569002 170569299 -82687284 - AluSq SINE Alu -17 296 1 2940 172 44 2 chr2 170570330 170570858 -82685725 + MER44D DNA MER2_type 1 605 0 2031 166 30 0 chr2 170570864 170571195 -82685388 - MER7A DNA MER2_type 0 346 8 423 0 0 0 chr2 170571200 170571247 -82685336 + (TG)n Simple_repeat Simple_repeat 2 48 0 509 152 0 0 chr2 170571843 170571922 -82684661 + MSTA LTR MaLR 299 377 -51 22 0 0 0 chr2 170573154 170573176 -82683407 + AT_rich Low_complexity Low_complexity 1 22 0 33 56 0 0 chr2 170574343 170574397 -82682186 + AT_rich Low_complexity Low_complexity 1 54 0 1752 197 3 3 chr2 170574430 170574921 -82681662 + AluJb SINE Alu 3 493 0 441 106 0 15 chr2 170574921 170574987 -82681596 + (GGGA)n Simple_repeat Simple_repeat 2 66 0 297 336 19 19 chr2 170575482 170575586 -82680997 - MIR SINE MIR -157 105 2 194 171 73 0 chr2 170575661 170575702 -82680881 - MER5A DNA MER1_type -145 44 1 855 286 34 67 chr2 170576303 170576799 -82679784 - MLT1J LTR MaLR -31 480 1 22 0 0 0 chr2 170576849 170576871 -82679712 + AT_rich Low_complexity Low_complexity 1 22 0 536 241 69 0 chr2 170577188 170577333 -82679250 - L2 LINE L2 -1 3312 3158 1825 181 17 64 chr2 170577368 170577755 -82678828 + MLT1B LTR MaLR 1 370 -20 1519 207 41 41 chr2 170577755 170578118 -82678465 + MLT1A1 LTR MaLR 3 365 0 1825 181 17 64 chr2 170578118 170578139 -82678444 + MLT1B LTR MaLR 370 390 0 367 269 160 8 chr2 170578178 170578297 -82678286 - L2 LINE L2 -246 3067 2931 320 321 28 0 chr2 170578754 170578863 -82677720 - MIR SINE MIR -78 184 73 365 166 187 129 chr2 170578960 170579066 -82677517 - MER5A DNA MER1_type 0 189 72 1513 171 16 44 chr2 170579066 170579241 -82677342 - AluJb SINE Alu 0 312 149 233 0 62 0 chr2 170579241 170579273 -82677310 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1513 171 16 44 chr2 170579273 170579418 -82677165 - AluJb SINE Alu -163 149 1 365 166 187 129 chr2 170579418 170579450 -82677133 - MER5A DNA MER1_type -117 72 43 2378 47 0 69 chr2 170579608 170579927 -82676656 - AluY SINE Alu -14 297 1 31 58 0 0 chr2 170580382 170580434 -82676149 + AT_rich Low_complexity Low_complexity 1 52 0 2092 118 6 16 chr2 170581013 170581328 -82675255 - AluSx SINE Alu 0 312 1 2351 87 0 0 chr2 170581705 170582003 -82674580 + AluY SINE Alu 3 300 -11 1544 143 11 19 chr2 170582252 170582518 -82674065 - AluJo SINE Alu -20 292 29 2001 118 47 7 chr2 170583902 170584198 -82672385 + AluSx SINE Alu 1 308 -4 2195 146 69 30 chr2 170584548 170585051 -82671532 + MLT2A2 LTR ERVL 1 554 0 1363 216 53 38 chr2 170585051 170585393 -82671190 - MLT1A1 LTR MaLR -18 347 1 1384 307 96 52 chr2 170585933 170586156 -82670427 - L2 LINE L2 -17 3296 3084 195 42 0 0 chr2 170586156 170586180 -82670403 + (ACATG)n Simple_repeat Simple_repeat 5 28 0 1384 307 96 52 chr2 170586180 170586288 -82670295 - L2 LINE L2 -229 3084 2982 2256 100 0 3 chr2 170586288 170586587 -82669996 + AluSx SINE Alu 1 298 -14 1384 307 96 52 chr2 170586587 170587284 -82669299 - L2 LINE L2 -331 2982 2221 896 275 124 14 chr2 170587350 170587714 -82668869 + LTR33 LTR ERVL 104 507 -14 2423 81 3 0 chr2 170588399 170588709 -82667874 - AluY SINE Alu 0 311 1 1086 347 59 51 chr2 170588907 170589866 -82666717 + HERVL LTR ERVL 1003 1975 -3789 847 209 73 6 chr2 170589866 170590043 -82666540 - MER5A DNA MER1_type 0 189 1 1086 347 59 51 chr2 170590043 170590261 -82666322 + HERVL LTR ERVL 1975 2190 -3574 577 334 70 22 chr2 170590376 170590747 -82665836 + HERVL LTR ERVL 2305 2693 -2961 845 316 37 3 chr2 170590804 170591101 -82665482 + HERVL LTR ERVL 2829 3135 -2629 1106 239 103 8 chr2 170591469 170591732 -82664851 + AluJo SINE Alu 2 289 -13 342 316 52 23 chr2 170591753 170591934 -82664649 + HERVL LTR ERVL 3453 3610 -2044 334 149 0 15 chr2 170592193 170592260 -82664323 - MLT1D LTR MaLR 0 505 440 745 171 0 0 chr2 170592260 170592377 -82664206 + FLAM_C SINE Alu 1 117 -26 234 246 0 31 chr2 170592536 170592601 -82663982 + L2 LINE L2 3237 3299 -14 * 246 304 0 89 chr2 170592584 170592696 -82663887 - L2 LINE L2 0 3313 3212 898 254 38 14 chr2 170592716 170592929 -82663654 - MER58A DNA MER1_type 0 224 7 762 316 121 1 chr2 170592933 170593386 -82663197 - L2 LINE L2 -163 3150 2646 251 274 16 0 chr2 170593763 170593825 -82662758 - L2 LINE L2 -1 3312 3250 2523 54 0 0 chr2 170594051 170594345 -82662238 - AluY SINE Alu -17 294 1 1894 153 6 34 chr2 170595334 170595654 -82660929 + AluJb SINE Alu 1 311 -1 2153 96 3 0 chr2 170595931 170596244 -82660339 + AluSg SINE Alu 1 314 0 412 200 109 9 chr2 170596918 170597028 -82659555 - MIR SINE MIR -50 212 92 25 51 0 0 chr2 170597435 170597474 -82659109 + AT_rich Low_complexity Low_complexity 1 39 0 340 272 117 0 chr2 170597829 170597932 -82658651 - L2 LINE L2 -44 3228 3114 297 337 96 17 chr2 170599071 170599249 -82657334 + MIR SINE MIR 14 205 -57 2309 119 0 0 chr2 170599500 170599812 -82656771 - AluSx SINE Alu 0 312 1 270 346 25 12 chr2 170599896 170599977 -82656606 - MIR SINE MIR -96 112 31 223 241 78 78 chr2 170603498 170603614 -82652969 + MIR SINE MIR 123 238 -24 375 359 163 0 chr2 170603867 170604076 -82652507 + MIR SINE MIR 20 262 0 270 0 0 0 chr2 170604242 170604272 -82652311 + (TG)n Simple_repeat Simple_repeat 2 31 0 1767 181 0 7 chr2 170604423 170604721 -82651862 - AluJb SINE Alu -16 296 1 783 260 12 12 chr2 170606602 170606775 -82649808 + MER5A DNA MER1_type 17 189 0 441 0 0 0 chr2 170608222 170608271 -82648312 + (CA)n Simple_repeat Simple_repeat 1 49 0 351 113 38 0 chr2 170611784 170611864 -82644719 + GA-rich Low_complexity Low_complexity 2 84 0 231 88 0 0 chr2 170612598 170612632 -82643951 + (CA)n Simple_repeat Simple_repeat 2 35 0 27 0 0 0 chr2 170612632 170612659 -82643924 + AT_rich Low_complexity Low_complexity 1 27 0 24 0 0 0 chr2 170614633 170614657 -82641926 + AT_rich Low_complexity Low_complexity 1 24 0 221 228 0 0 chr2 170615271 170615328 -82641255 + (TTTG)n Simple_repeat Simple_repeat 2 58 0 207 100 0 0 chr2 170615432 170615462 -82641121 + (CCA)n Simple_repeat Simple_repeat 2 31 0 243 0 0 0 chr2 170619696 170619723 -82636860 + (TG)n Simple_repeat Simple_repeat 2 28 0 203 0 37 0 chr2 170619753 170619780 -82636803 + (TA)n Simple_repeat Simple_repeat 2 29 0 237 65 0 0 chr2 170619780 170619811 -82636772 + (GA)n Simple_repeat Simple_repeat 1 31 0 413 292 97 27 chr2 170620037 170620222 -82636361 - MIR3 SINE MIR -7 201 4 24 53 0 0 chr2 170621023 170621061 -82635522 + AT_rich Low_complexity Low_complexity 1 38 0 30 27 0 0 chr2 170623692 170623729 -82632854 + AT_rich Low_complexity Low_complexity 1 37 0 474 297 79 55 chr2 170625502 170625832 -82630751 + MER102b DNA MER1_type 2 339 -2 261 0 0 0 chr2 170627855 170627884 -82628699 + (TG)n Simple_repeat Simple_repeat 2 30 0 866 182 38 0 chr2 170629185 170629344 -82627239 + AluSg/x SINE Alu 124 288 -22 35 0 0 0 chr2 170629545 170629580 -82627003 + AT_rich Low_complexity Low_complexity 1 35 0 1926 136 0 11 chr2 170629580 170629867 -82626716 - AluJb SINE Alu -27 285 2 237 65 0 0 chr2 170631682 170631713 -82624870 + (TA)n Simple_repeat Simple_repeat 1 31 0 4271 106 11 8 chr2 170633631 170634264 -82622319 + MER41B LTR ERV1 1 635 0 192 77 0 0 chr2 170634766 170634792 -82621791 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 265 248 116 25 chr2 170635818 170635939 -82620644 - MIR SINE MIR -72 190 59 1010 214 36 5 chr2 170636600 170636820 -82619763 - MSTB LTR MaLR -198 228 2 2008 144 6 6 chr2 170637814 170638126 -82618457 + AluSx SINE Alu 1 312 0 312 91 0 0 chr2 170638649 170638693 -82617890 + (CATATA)n Simple_repeat Simple_repeat 5 48 0 1062 144 0 0 chr2 170638693 170638873 -82617710 + (TA)n Simple_repeat Simple_repeat 1 180 0 1938 141 16 0 chr2 170638873 170639177 -82617406 - AluSq SINE Alu -4 309 1 25 0 0 0 chr2 170639218 170639243 -82617340 + AT_rich Low_complexity Low_complexity 1 25 0 254 264 0 0 chr2 170639245 170639298 -82617285 - AluJ/monomer SINE Alu -14 286 234 1647 194 13 16 chr2 170639557 170639867 -82616716 - AluJb SINE Alu -2 310 2 184 339 0 17 chr2 170641339 170641398 -82615185 + L2 LINE L2 3206 3263 -50 2184 131 0 0 chr2 170641468 170641774 -82614809 + AluSq SINE Alu 1 306 -7 629 290 165 44 chr2 170641807 170642214 -82614369 - MER115 DNA AcHobo -74 619 164 180 242 48 0 chr2 170642214 170642276 -82614307 + MIR SINE MIR 144 208 -54 195 329 0 14 chr2 170642317 170642390 -82614193 + L3 LINE CR1 1290 1361 -216 1488 186 37 14 chr2 170642511 170642807 -82613776 + AluJo SINE Alu 1 303 -9 806 207 131 5 chr2 170642889 170643111 -82613472 - MIR SINE MIR 0 262 13 315 326 58 16 chr2 170643354 170643544 -82613039 + L2 LINE L2 2222 2419 -895 336 102 0 0 chr2 170643677 170643726 -82612857 + (TG)n Simple_repeat Simple_repeat 2 50 0 218 343 15 0 chr2 170644486 170644553 -82612030 + L2 LINE L2 3185 3252 -20 1775 188 10 10 chr2 170644888 170645191 -82611392 + AluJb SINE Alu 1 303 -9 202 220 0 0 chr2 170645526 170645576 -82611007 + (TAGA)n Simple_repeat Simple_repeat 2 51 0 1951 78 4 0 chr2 170645886 170646151 -82610432 - AluSp SINE Alu 0 302 37 30 45 0 0 chr2 170646390 170646434 -82610149 + AT_rich Low_complexity Low_complexity 1 44 0 1530 115 0 5 chr2 170646471 170646689 -82609894 + AluSg/x SINE Alu 82 298 -12 22 0 0 0 chr2 170648708 170648730 -82607853 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 170649336 170649364 -82607219 + AT_rich Low_complexity Low_complexity 1 28 0 312 302 12 0 chr2 170650994 170651080 -82605503 - MIR3 SINE MIR -10 198 112 291 323 42 0 chr2 170652245 170652341 -82604242 + L2 LINE L2 3167 3266 -6 4346 190 38 19 chr2 170652341 170652964 -82603619 + L1MB8 LINE L1 4352 4961 -1217 2059 149 0 0 chr2 170652964 170653260 -82603323 + AluSx SINE Alu 4 299 -13 1798 129 77 3 chr2 170653265 170653552 -82603031 + AluSq SINE Alu 2 309 -4 4346 190 38 19 chr2 170653552 170654710 -82601873 + L1MB8 LINE L1 4964 6178 0 251 295 57 25 chr2 170654777 170654899 -82601684 - L2 LINE L2 -353 2960 2835 23 0 0 0 chr2 170656122 170656145 -82600438 + AT_rich Low_complexity Low_complexity 1 23 0 402 318 69 12 chr2 170657071 170657244 -82599339 - MIR3 SINE MIR -15 193 11 205 179 36 18 chr2 170657382 170657438 -82599145 + (TATATG)n Simple_repeat Simple_repeat 3 59 0 208 231 0 51 chr2 170657584 170657662 -82598921 + (CAGAGA)n Simple_repeat Simple_repeat 5 78 0 260 153 167 28 chr2 170658815 170658887 -82597696 + MLT1H1 LTR MaLR 1 82 -460 697 221 182 54 chr2 170658972 170659350 -82597233 + MLT1H1 LTR MaLR 172 553 -2 260 250 39 67 chr2 170659517 170659621 -82596962 - MIR SINE MIR -146 116 16 241 169 48 24 chr2 170659888 170659971 -82596612 + (TA)n Simple_repeat Simple_repeat 1 85 0 1856 67 16 4 chr2 170659990 170660245 -82596338 - L1PA7 LINE L1 -4 6150 5893 2127 104 23 0 chr2 170660775 170661074 -82595509 + AluY SINE Alu 1 306 -5 381 22 0 0 chr2 170661937 170661983 -82594600 + (CA)n Simple_repeat Simple_repeat 2 47 0 1036 245 63 4 chr2 170662581 170662818 -82593765 + MIR SINE MIR 1 251 -11 219 389 0 14 chr2 170662827 170662899 -82593684 - L2 LINE L2 -32 3281 3211 24 0 0 0 chr2 170662943 170662967 -82593616 + AT_rich Low_complexity Low_complexity 1 24 0 23 33 0 0 chr2 170663720 170663750 -82592833 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr2 170663832 170663861 -82592722 + AT_rich Low_complexity Low_complexity 1 29 0 882 98 116 12 chr2 170664283 170664447 -82592136 + L1MA3 LINE L1 6125 6305 0 291 93 0 0 chr2 170665356 170665399 -82591184 + (CA)n Simple_repeat Simple_repeat 2 44 0 216 0 0 0 chr2 170665398 170665422 -82591161 + (GA)n Simple_repeat Simple_repeat 2 25 0 * 288 0 0 0 chr2 170667094 170667126 -82589457 + (TG)n Simple_repeat Simple_repeat 1 32 0 362 261 0 22 chr2 170668015 170668107 -82588476 + L1MC4 LINE L1 6614 6703 -1339 356 250 0 22 chr2 170668035 170668127 -82588456 - L1MC4 LINE L1 -1339 6703 6614 * 2403 82 16 0 chr2 170668134 170668438 -82588145 - AluSq SINE Alu -4 309 1 180 0 0 0 chr2 170668488 170668508 -82588075 + (TTA)n Simple_repeat Simple_repeat 2 21 0 844 206 0 0 chr2 170668508 170668654 -82587929 - AluJo/FRAM SINE Alu -16 286 141 1284 148 0 5 chr2 170668657 170668853 -82587730 - AluSq SINE Alu -20 293 99 2808 79 0 0 chr2 170668853 170669208 -82587375 + THE1A LTR MaLR 1 355 0 5005 110 15 5 chr2 170669208 170669943 -82586640 + THE1A-int LTR MaLR 1 742 -838 2550 87 6 14 chr2 170669949 170670307 -82586276 + THE1A LTR MaLR 1 355 0 1009 96 0 34 chr2 170670329 170670475 -82586108 - AluSq/x SINE Alu -172 141 1 1800 96 4 0 chr2 170670580 170670833 -82585750 - AluSp SINE Alu 0 309 56 2242 89 3 3 chr2 170670856 170671163 -82585420 + AluSp SINE Alu 2 308 0 183 275 187 0 chr2 170671241 170671332 -82585251 + MIR SINE MIR 48 155 -107 198 273 136 0 chr2 170673080 170673146 -82583437 + MIR SINE MIR 70 144 -118 308 328 40 57 chr2 170673731 170673908 -82582675 + MIR3 SINE MIR 32 205 -3 188 281 156 62 chr2 170673975 170674071 -82582512 - MIR3 SINE MIR -49 159 55 198 191 0 0 chr2 170674191 170674233 -82582350 + (TA)n Simple_repeat Simple_repeat 1 42 0 502 303 92 92 chr2 170674806 170675186 -82581397 + L2 LINE L2 2893 3272 0 756 252 163 27 chr2 170675455 170675792 -82580791 - L2 LINE L2 -1091 2223 1841 2571 46 0 3 chr2 170675914 170676216 -82580367 + AluY SINE Alu 1 301 -10 189 0 0 0 chr2 170676271 170676292 -82580291 + (TA)n Simple_repeat Simple_repeat 1 21 0 1299 145 0 23 chr2 170676472 170676686 -82579897 - AluJb SINE Alu -17 295 87 529 234 0 0 chr2 170677844 170677968 -82578615 - L1MA7 LINE L1 -6 6285 6162 245 255 0 0 chr2 170679768 170679819 -82576764 + L2 LINE L2 3257 3307 -6 250 282 14 0 chr2 170680925 170680996 -82575587 + L2 LINE L2 3154 3225 -47 301 252 148 0 chr2 170681138 170681253 -82575330 + MIR SINE MIR 116 247 -15 1008 181 33 0 chr2 170682654 170682836 -82573747 + MER5A DNA MER1_type 2 189 0 285 98 0 0 chr2 170682945 170682986 -82573597 + (T)n Simple_repeat Simple_repeat 1 41 0 192 26 53 26 chr2 170683071 170683109 -82573474 + (TA)n Simple_repeat Simple_repeat 2 40 0 23 0 0 0 chr2 170683295 170683318 -82573265 + AT_rich Low_complexity Low_complexity 1 23 0 450 0 0 0 chr2 170683691 170683741 -82572842 + (TA)n Simple_repeat Simple_repeat 2 51 0 945 169 38 22 chr2 170684640 170684824 -82571759 + MER3 DNA MER1_type 23 209 0 1326 181 19 54 chr2 170685213 170685472 -82571111 - L1MC3 LINE L1 -21 7764 7516 2279 112 0 0 chr2 170685472 170685777 -82570806 - AluSx SINE Alu -7 305 1 1326 181 19 54 chr2 170685777 170685831 -82570752 - L1MC3 LINE L1 -269 7516 7462 2289 81 0 10 chr2 170686468 170686765 -82569818 + AluY SINE Alu 1 294 -17 237 384 96 0 chr2 170687126 170687272 -82569311 - MIR3 SINE MIR -8 200 41 555 284 113 9 chr2 170688177 170688399 -82568184 - MIR SINE MIR 0 262 18 190 203 186 0 chr2 170688551 170688610 -82567973 - MIR3 SINE MIR -26 182 113 731 208 0 0 chr2 170688685 170688815 -82567768 + FLAM_C SINE Alu 1 130 -3 207 0 0 0 chr2 170689393 170689416 -82567167 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 284 271 17 0 chr2 170689997 170690056 -82566527 - L2 LINE L2 -5 3267 3208 449 257 10 20 chr2 170690124 170690225 -82566358 + MIR3 SINE MIR 79 178 -30 1104 131 11 6 chr2 170690870 170691046 -82565537 - MER5B DNA MER1_type -1 177 1 1226 125 9 54 chr2 170692024 170692248 -82564335 - AluSq SINE Alu -6 307 94 1034 101 0 0 chr2 170692386 170692515 -82564068 - AluSg SINE Alu -179 131 3 434 336 92 35 chr2 170692732 170693047 -82563536 - L3 LINE CR1 -306 1271 939 301 161 18 0 chr2 170694191 170694247 -82562336 - L1MC4 LINE L1 -1340 6702 6646 234 91 0 0 chr2 170694445 170694478 -82562105 + (CA)n Simple_repeat Simple_repeat 2 34 0 192 171 0 73 chr2 170694582 170694623 -82561960 - L2 LINE L2 -1098 2216 2179 1520 198 35 0 chr2 170696320 170696603 -82559980 + AluJb SINE Alu 1 293 -19 249 57 0 0 chr2 170696606 170696641 -82559942 + (CA)n Simple_repeat Simple_repeat 2 36 0 21 0 0 0 chr2 170696906 170696927 -82559656 + AT_rich Low_complexity Low_complexity 1 21 0 180 374 43 0 chr2 170698047 170698162 -82558421 + L3b LINE CR1 1153 1272 -311 414 258 169 54 chr2 170698622 170698917 -82557666 + MER102a DNA MER1_type 2 330 0 26 50 0 0 chr2 170699548 170699588 -82556995 + AT_rich Low_complexity Low_complexity 1 40 0 218 116 23 0 chr2 170700664 170700707 -82555876 + (TG)n Simple_repeat Simple_repeat 2 45 0 204 213 98 16 chr2 170700810 170700871 -82555712 + L2 LINE L2 3169 3234 -38 186 143 0 0 chr2 170701047 170701082 -82555501 + (CA)n Simple_repeat Simple_repeat 2 36 0 474 234 131 0 chr2 170701751 170701888 -82554695 - MER103 DNA DNA -9 157 3 412 295 41 0 chr2 170701969 170702091 -82554492 - MIR3 SINE MIR -1 207 81 637 219 0 8 chr2 170702265 170702384 -82554199 - FLAM_A SINE Alu -15 118 1 523 261 42 0 chr2 170702989 170703108 -82553475 + MER94 DNA DNA 5 128 -6 216 316 237 0 chr2 170703115 170703254 -82553329 + L2 LINE L2 3124 3295 -18 2081 122 0 10 chr2 170703258 170703571 -82553012 + AluSx SINE Alu 1 310 0 227 278 37 83 chr2 170704005 170704067 -82552516 - MIR SINE MIR -56 206 148 1498 208 0 10 chr2 170704067 170704403 -82552180 - AluJo SINE Alu 0 333 1 227 278 37 83 chr2 170704403 170704447 -82552136 - MIR SINE MIR -114 148 104 2067 152 7 0 chr2 170704523 170704833 -82551750 - AluSx SINE Alu 0 312 1 363 309 81 42 chr2 170705079 170705315 -82551268 + MIR SINE MIR 16 260 -2 352 323 24 24 chr2 170705475 170705642 -82550941 + MIR SINE MIR 21 187 -75 200 61 61 0 chr2 170707474 170707507 -82549076 + GA-rich Low_complexity Low_complexity 3 37 0 370 283 109 43 chr2 170708547 170708731 -82547852 + MIR SINE MIR 12 207 -55 693 182 71 29 chr2 170709569 170709739 -82546844 + MER69A DNA AcHobo 1 177 0 27 0 0 0 chr2 170711526 170711553 -82545030 + AT_rich Low_complexity Low_complexity 1 27 0 315 299 46 0 chr2 170711950 170712037 -82544546 + MIR SINE MIR 59 149 -113 357 24 0 0 chr2 170712048 170712090 -82544493 + (TC)n Simple_repeat Simple_repeat 1 42 0 306 0 0 0 chr2 170712089 170712123 -82544460 + (CA)n Simple_repeat Simple_repeat 1 34 0 * 343 292 62 31 chr2 170712811 170712941 -82543642 - MIR3 SINE MIR -11 197 64 26 30 0 0 chr2 170713912 170713945 -82542638 + AT_rich Low_complexity Low_complexity 1 33 0 1565 101 0 40 chr2 170714586 170714813 -82541770 + AluSc SINE Alu 88 305 -4 27 0 0 0 chr2 170715741 170715768 -82540815 + AT_rich Low_complexity Low_complexity 1 27 0 209 189 0 0 chr2 170718436 170718473 -82538110 + (CA)n Simple_repeat Simple_repeat 2 38 0 221 0 35 0 chr2 170720877 170720906 -82535677 + (CA)n Simple_repeat Simple_repeat 1 30 0 22 0 0 0 chr2 170724961 170724983 -82531600 + AT_rich Low_complexity Low_complexity 1 22 0 249 57 0 0 chr2 170726263 170726298 -82530285 + (GA)n Simple_repeat Simple_repeat 2 36 0 186 43 0 0 chr2 170728407 170728430 -82528153 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 21 0 0 0 chr2 170728626 170728647 -82527936 + AT_rich Low_complexity Low_complexity 1 21 0 236 239 155 0 chr2 170729811 170729882 -82526701 + L3 LINE CR1 1403 1484 -93 36 53 0 0 chr2 170730281 170730338 -82526245 + AT_rich Low_complexity Low_complexity 1 57 0 2167 63 0 17 chr2 170730340 170730668 -82525915 + AluY SINE Alu 1 323 0 272 318 76 62 chr2 170730701 170730990 -82525593 - L2 LINE L2 -4 3309 3017 356 256 0 108 chr2 170731476 170731605 -82524978 - MIR3 SINE MIR -9 199 85 208 154 103 0 chr2 170731865 170731904 -82524679 + MER5B DNA MER1_type 16 58 -120 27 0 0 0 chr2 170731938 170731965 -82524618 + AT_rich Low_complexity Low_complexity 1 27 0 180 111 0 0 chr2 170732695 170732722 -82523861 + (GAAAA)n Simple_repeat Simple_repeat 2 28 0 685 208 39 45 chr2 170735972 170736150 -82520433 + MER45A DNA AcHobo 1 177 -1 213 155 0 42 chr2 170736443 170736514 -82520069 + (TA)n Simple_repeat Simple_repeat 1 68 0 318 26 0 0 chr2 170737748 170737787 -82518796 + (TG)n Simple_repeat Simple_repeat 1 39 0 215 163 0 23 chr2 170741106 170741149 -82515434 + CT-rich Low_complexity Low_complexity 2 43 0 180 0 0 0 chr2 170741191 170741211 -82515372 + (A)n Simple_repeat Simple_repeat 1 20 0 180 0 0 0 chr2 170741806 170741826 -82514757 + (A)n Simple_repeat Simple_repeat 1 20 0 262 279 0 73 chr2 170743362 170743527 -82513056 + G-rich Low_complexity Low_complexity 1 153 0 28 0 0 0 chr2 170743584 170743612 -82512971 + GC_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 170743627 170743651 -82512932 + GC_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 170745479 170745500 -82511083 + AT_rich Low_complexity Low_complexity 1 21 0 26 98 0 0 chr2 170747039 170747121 -82509462 + AT_rich Low_complexity Low_complexity 1 82 0 243 88 0 0 chr2 170747345 170747379 -82509204 + (A)n Simple_repeat Simple_repeat 1 34 0 632 218 0 27 chr2 170747889 170748036 -82508547 - FLAM_C SINE Alu 0 143 1 282 116 0 0 chr2 170749312 170749355 -82507228 + (T)n Simple_repeat Simple_repeat 1 43 0 208 256 0 0 chr2 170749394 170749437 -82507146 + (TATATG)n Simple_repeat Simple_repeat 5 47 0 26 50 0 0 chr2 170750742 170750782 -82505801 + AT_rich Low_complexity Low_complexity 1 40 0 1542 150 8 0 chr2 170751208 170751474 -82505109 + L1PA16 LINE L1 5890 6157 -9 338 252 43 9 chr2 170752085 170752200 -82504383 - MLT1L LTR MaLR -4 611 493 350 274 157 15 chr2 170752245 170752442 -82504141 - MLT1L LTR MaLR -239 376 152 22 88 0 0 chr2 170752925 170752982 -82503601 + AT_rich Low_complexity Low_complexity 1 57 0 1515 160 15 8 chr2 170754514 170754782 -82501801 - L1PB4 LINE L1 -13 6143 5874 516 262 91 11 chr2 170755412 170755599 -82500984 - MIR SINE MIR -52 210 9 26 30 0 0 chr2 170755952 170755985 -82500598 + AT_rich Low_complexity Low_complexity 1 33 0 1535 150 11 15 chr2 170755990 170756256 -82500327 - AluJb SINE Alu -10 302 38 293 283 158 20 chr2 170756679 170756831 -82499752 + MER5A DNA MER1_type 8 180 -9 591 15 0 0 chr2 170756938 170757006 -82499577 + (TTCC)n Simple_repeat Simple_repeat 4 71 0 243 125 0 0 chr2 170757040 170757080 -82499503 + (GA)n Simple_repeat Simple_repeat 1 40 0 776 259 0 0 chr2 170758348 170758514 -82498069 - FAM SINE Alu -8 167 2 253 199 15 206 chr2 170759951 170760082 -82496501 + MIR SINE MIR 85 190 -72 491 296 154 18 chr2 170762481 170762701 -82493882 + MIR SINE MIR 10 259 -3 384 209 143 11 chr2 170764524 170764615 -82491968 - MIR3 SINE MIR -1 207 105 437 240 223 11 chr2 170764716 170764891 -82491692 - MIR SINE MIR -26 236 25 1600 145 32 51 chr2 170765563 170765874 -82490709 + AluJo SINE Alu 7 311 -1 490 275 103 34 chr2 170768700 170768933 -82487650 - MIR SINE MIR 0 262 14 236 302 0 0 chr2 170770195 170770248 -82486335 + L2 LINE L2 3251 3303 -10 190 281 18 18 chr2 170770276 170770333 -82486250 + L3 LINE CR1 178 234 -1343 432 336 36 9 chr2 170770342 170770562 -82486021 + MIR SINE MIR 36 261 -1 210 118 0 0 chr2 170770770 170770804 -82485779 + (TCTA)n Simple_repeat Simple_repeat 1 34 0 236 161 49 12 chr2 170770806 170770887 -82485696 + CT-rich Low_complexity Low_complexity 1 84 0 2015 176 80 9 chr2 170771333 170771760 -82484823 - MLT1C LTR MaLR -8 459 3 198 256 0 0 chr2 170771875 170771918 -82484665 - L2 LINE L2 -2 3311 3269 183 329 66 0 chr2 170771885 170771961 -82484622 - MIR SINE MIR -6 256 176 * 653 0 13 0 chr2 170771998 170772075 -82484508 + (TCTA)n Simple_repeat Simple_repeat 1 78 0 264 319 0 0 chr2 170772991 170773063 -82483520 - Charlie8 DNA MER1_type -1 2416 2345 436 200 31 113 chr2 170773412 170773572 -82483011 - MER103 DNA DNA -8 158 12 21 0 0 0 chr2 170775242 170775263 -82481320 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr2 170776488 170776523 -82480060 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 170778446 170778467 -82478116 + AT_rich Low_complexity Low_complexity 1 21 0 452 110 55 0 chr2 170778769 170778842 -82477741 - MADE1 DNA Mariner 0 80 4 342 0 0 0 chr2 170779372 170779410 -82477173 + (TG)n Simple_repeat Simple_repeat 2 39 0 2065 126 10 0 chr2 170779458 170779629 -82476954 - AluSq SINE Alu -8 305 128 657 0 0 0 chr2 170779629 170779702 -82476881 + (TTTTA)n Simple_repeat Simple_repeat 2 74 0 2065 126 10 0 chr2 170779702 170779832 -82476751 - AluSq SINE Alu -185 128 1 421 308 39 13 chr2 170780386 170780542 -82476041 - MIR SINE MIR -6 256 97 1117 176 32 14 chr2 170780542 170780579 -82476004 + AluJb SINE Alu 84 119 -193 207 0 0 0 chr2 170780579 170780602 -82475981 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 279 0 0 0 chr2 170780603 170780634 -82475949 + (CA)n Simple_repeat Simple_repeat 2 32 0 1117 176 32 14 chr2 170780634 170780810 -82475773 + AluJb SINE Alu 118 303 -9 1990 149 0 3 chr2 170783161 170783456 -82473127 + AluJb SINE Alu 1 294 -18 1673 171 9 50 chr2 170783492 170783814 -82472769 - AluJb SINE Alu -3 309 1 22 0 0 0 chr2 170783926 170783948 -82472635 + AT_rich Low_complexity Low_complexity 1 22 0 325 245 201 0 chr2 170784238 170784377 -82472206 - MIR SINE MIR -6 256 90 1161 294 112 20 chr2 170784812 170785379 -82471204 + L2 LINE L2 2687 3310 -3 3088 118 113 84 chr2 170785589 170786290 -82470293 + L1MA9 LINE L1 5592 6312 0 191 304 25 0 chr2 170786599 170786678 -82469905 - L2 LINE L2 -532 2782 2702 272 344 41 25 chr2 170788519 170788641 -82467942 + L3 LINE CR1 497 620 -957 470 257 40 7 chr2 170789062 170789210 -82467373 + L1M4 LINE L1 4085 4237 -1909 411 187 252 0 chr2 170789218 170789373 -82467210 - L1MCa LINE L1 -4321 2105 1912 433 245 147 11 chr2 170789390 170789574 -82467009 + L3 LINE CR1 907 1115 -462 2226 90 45 0 chr2 170789695 170790027 -82466556 - L1MA3 LINE L1 0 6305 5959 233 289 0 0 chr2 170790743 170790819 -82465764 + A-rich Low_complexity Low_complexity 1 76 0 411 273 119 6 chr2 170790826 170791002 -82465581 + L3 LINE CR1 1356 1551 -26 194 125 0 100 chr2 170791145 170791185 -82465398 + L2 LINE L2 3266 3301 -12 2260 107 3 0 chr2 170791864 170792174 -82464409 - AluSq SINE Alu -2 311 1 1773 226 26 61 chr2 170792174 170792713 -82463870 + MLT2B1 LTR ERVL 1 520 0 2310 102 3 0 chr2 170793135 170793438 -82463145 - AluSg SINE Alu -6 304 1 607 206 17 56 chr2 170793611 170793791 -82462792 - L2 LINE L2 0 3313 3141 4077 176 28 55 chr2 170794506 170795385 -82461198 - MER21B LTR ERV1 -7 856 1 241 200 20 0 chr2 170795741 170795791 -82460792 - L2 LINE L2 0 3272 3222 7641 48 1 1 chr2 170796203 170797926 -82458657 + L1PA5 LINE L1 4429 6152 -2 332 310 69 30 chr2 170798120 170798329 -82458254 - MIR SINE MIR -5 257 41 21 0 0 0 chr2 170799231 170799252 -82457331 + AT_rich Low_complexity Low_complexity 1 21 0 239 78 26 78 chr2 170799252 170799329 -82457254 - L1MA3 LINE L1 -1 6304 6232 239 86 0 103 chr2 170799979 170800037 -82456546 - L1PA4 LINE L1 -1 6154 6103 684 176 0 133 chr2 170800137 170800347 -82456236 + MER3 DNA MER1_type 27 208 -1 242 242 30 81 chr2 170800674 170800773 -82455810 - MIR3 SINE MIR -103 105 12 1586 243 128 17 chr2 170802242 170802822 -82453761 + LTR48B LTR ERV1 1 644 0 246 279 29 0 chr2 170802826 170802894 -82453689 + MIR SINE MIR 75 144 -64 2604 45 3 0 chr2 170803163 170803471 -82453112 - AluY SINE Alu -2 309 1 196 214 0 0 chr2 170804096 170804138 -82452445 + L2 LINE L2 3221 3262 -10 4582 255 71 36 chr2 170804498 170806185 -82450398 - L1MEc LINE L1 -4228 2168 540 426 20 0 0 chr2 170806185 170806236 -82450347 + (TC)n Simple_repeat Simple_repeat 2 52 0 4582 255 71 36 chr2 170806236 170806465 -82450118 - L1MEc LINE L1 -5856 540 320 369 113 62 0 chr2 170806465 170806545 -82450038 + L1PA16 LINE L1 6080 6164 -2 4582 255 71 36 chr2 170806545 170806652 -82449931 - L1MEc LINE L1 -6076 320 37 282 276 11 11 chr2 170810693 170810780 -82445803 + CT-rich Low_complexity Low_complexity 1 87 0 227 344 11 22 chr2 170811337 170811427 -82445156 + MIR3 SINE MIR 111 199 -9 27 62 0 0 chr2 170811996 170812044 -82444539 + AT_rich Low_complexity Low_complexity 1 48 0 379 330 53 94 chr2 170813252 170813719 -82442864 - L2 LINE L2 -2 3270 2823 238 314 97 76 chr2 170813919 170814104 -82442479 - L2 LINE L2 -523 2791 2603 1512 245 44 46 chr2 170814710 170815246 -82441337 + MLT1E2 LTR MaLR 3 505 0 2173 140 8 17 chr2 170815298 170815354 -82441229 - MER7A DNA MER2_type -2692 346 291 2667 152 17 0 chr2 170815354 170815775 -82440808 + MSTA LTR MaLR 1 428 0 2173 140 8 17 chr2 170815775 170816069 -82440514 - MER7A DNA MER2_type -2747 291 1 1267 305 99 5 chr2 170816692 170817128 -82439455 + LTR16C LTR ERVL 1 477 -14 24 32 0 0 chr2 170817620 170817651 -82438932 + AT_rich Low_complexity Low_complexity 1 31 0 2590 64 0 0 chr2 170817802 170818113 -82438470 + AluY SINE Alu 1 311 0 191 102 0 61 chr2 170818951 170819000 -82437583 + (A)n Simple_repeat Simple_repeat 1 46 0 1369 185 54 40 chr2 170819490 170819788 -82436795 - AluJo SINE Alu -10 302 1 321 82 0 0 chr2 170819933 170819982 -82436601 + (TC)n Simple_repeat Simple_repeat 2 50 0 334 320 84 48 chr2 170820205 170820514 -82436069 - HAL1b LINE L1 -970 378 59 29 0 0 0 chr2 170820795 170820824 -82435759 + AT_rich Low_complexity Low_complexity 1 29 0 201 121 0 0 chr2 170820892 170820925 -82435658 + (TCCCC)n Simple_repeat Simple_repeat 5 37 0 1543 181 0 46 chr2 170820943 170821224 -82435359 - AluJo SINE Alu -39 273 6 1916 268 96 30 chr2 170821480 170822372 -82434211 - L1MEc LINE L1 -3905 2312 1376 336 48 0 0 chr2 170822372 170822414 -82434169 + (TCTA)n Simple_repeat Simple_repeat 3 44 0 1916 268 96 30 chr2 170822414 170822614 -82433969 - L1MEc LINE L1 -4841 1376 1191 758 137 39 46 chr2 170822622 170822775 -82433808 - BC200 scRNA scRNA -47 153 2 333 228 11 0 chr2 170822802 170822894 -82433689 - L1MEc LINE L1 -5249 1147 1055 7765 20 0 1 chr2 170822911 170824366 -82432217 - L1PA3 LINE L1 0 6155 4702 600 113 38 38 chr2 170824366 170824472 -82432111 - BC200 scRNA scRNA -93 107 2 1397 296 55 67 chr2 170824502 170825526 -82431057 - L1MEc LINE L1 -5254 1142 132 189 74 0 0 chr2 170825538 170825565 -82431018 + (TCTA)n Simple_repeat Simple_repeat 4 30 0 576 355 183 16 chr2 170826741 170827299 -82429284 + L3 LINE CR1 369 1019 -558 187 288 243 27 chr2 170827511 170827622 -82428961 + L3 LINE CR1 1209 1343 -234 272 235 0 24 chr2 170828142 170828227 -82428356 + L2 LINE L2 3115 3197 -116 829 80 0 0 chr2 170828237 170828350 -82428233 - L1MA1 LINE L1 0 7721 7609 15702 174 74 27 chr2 170828350 170831038 -82425545 - L1MA1 LINE L1 -326 7395 4834 2204 124 0 0 chr2 170831038 170831345 -82425238 - AluSc SINE Alu -2 307 1 15702 174 74 27 chr2 170831345 170834559 -82422024 - L1MA1 LINE L1 -2887 4834 1772 1976 144 79 15 chr2 170834559 170834900 -82421683 - THE1B LTR MaLR 0 364 2 11317 93 10 1 chr2 170834901 170836467 -82420116 - THE1B-int LTR MaLR 0 1580 1 2111 128 72 17 chr2 170836467 170836812 -82419771 - THE1B LTR MaLR 0 364 1 15702 174 74 27 chr2 170836812 170837941 -82418642 - L1MA1 LINE L1 -5948 1773 11 1141 209 95 71 chr2 170837982 170838393 -82418190 - MLT1C LTR MaLR -41 426 6 441 263 20 0 chr2 170838397 170838496 -82418087 + L2 LINE L2 3208 3308 -5 208 202 24 155 chr2 170838469 170838553 -82418030 - L2 LINE L2 -4 3309 3237 * 192 313 0 0 chr2 170838587 170838635 -82417948 + L2 LINE L2 3179 3226 -87 2471 60 0 13 chr2 170838665 170838980 -82417603 - AluY SINE Alu 0 311 1 22 70 0 0 chr2 170839814 170839857 -82416726 + AT_rich Low_complexity Low_complexity 1 43 0 285 29 0 0 chr2 170839986 170840020 -82416563 + (CA)n Simple_repeat Simple_repeat 2 35 0 1007 218 28 25 chr2 170841460 170841771 -82414812 - MER39 LTR ERV1 -4 662 392 207 91 0 68 chr2 170842056 170842100 -82414483 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 2248 109 0 0 chr2 170842148 170842450 -82414133 - AluSg SINE Alu -8 302 1 235 203 135 11 chr2 170842460 170842560 -82414023 - MER39 LTR ERV1 -419 123 1 423 263 123 61 chr2 170844018 170844409 -82412174 - L1ME4a LINE L1 -1 6120 5706 262 256 59 66 chr2 170844450 170844793 -82411790 - L1ME4a LINE L1 -491 5630 5291 594 294 110 77 chr2 170844822 170845431 -82411152 - L1ME4a LINE L1 -913 5233 4605 905 162 45 0 chr2 170845463 170845617 -82410966 + MLT1D LTR MaLR 1 161 -344 847 217 43 0 chr2 170845656 170845840 -82410743 + MLT1D LTR MaLR 314 505 0 1643 168 66 0 chr2 170845929 170846215 -82410368 - AluSx SINE Alu -7 305 1 365 303 172 36 chr2 170846402 170846440 -82410143 - L1ME4a LINE L1 -2958 3188 3157 930 230 0 0 chr2 170846440 170846614 -82409969 + FAM SINE Alu 2 175 0 365 303 172 36 chr2 170846614 170847017 -82409566 - L1ME4a LINE L1 -2989 3157 2687 2623 134 26 44 chr2 170848276 170848820 -82407763 + L1MA8 LINE L1 5753 6286 -5 412 284 278 22 chr2 170848934 170849304 -82407279 - L1ME3 LINE L1 -268 6288 5824 1712 246 108 27 chr2 170849351 170850165 -82406418 - L1ME3 LINE L1 -806 5734 4855 2230 253 135 60 chr2 170850204 170852171 -82404412 - L1ME3 LINE L1 -1744 4796 2660 5360 148 19 0 chr2 170852171 170853524 -82403059 + L1PA16 LINE L1 4789 6157 -9 2230 253 135 60 chr2 170853524 170853671 -82402912 - L1ME3 LINE L1 -3880 2660 2525 3228 261 54 11 chr2 170853722 170855022 -82401561 - L1M4 LINE L1 -2436 3710 2355 335 257 0 0 chr2 170855024 170855094 -82401489 - L1ME3 LINE L1 -5811 729 660 4730 200 81 32 chr2 170855102 170856445 -82400138 + L1MDa LINE L1 1123 2544 -3996 4198 113 13 6 chr2 170856445 170857076 -82399507 - MER41B LTR ERV1 0 635 1 4730 200 81 32 chr2 170857076 170857185 -82399398 + L1MDa LINE L1 2544 2646 -3894 2061 269 19 12 chr2 170857211 170857441 -82399142 + L1MDa LINE L1 2747 2974 -3566 2485 43 3 0 chr2 170857441 170857746 -82398837 + AluY SINE Alu 1 306 -5 2061 269 19 12 chr2 170857746 170858200 -82398383 + L1MDa LINE L1 2974 3436 -3104 294 121 17 35 chr2 170858201 170858259 -82398324 + AluSq/x SINE Alu 87 143 -159 273 188 0 0 chr2 170858258 170858306 -82398277 + Alu SINE Alu 252 299 -3 * 1344 266 60 54 chr2 170858317 170859062 -82397521 + L1MDa LINE L1 3447 4196 -2344 788 284 48 21 chr2 170859056 170859390 -82397193 + L1MDa LINE L1 5067 5409 -1131 * 540 308 83 33 chr2 170859445 170860266 -82396317 - L1MEc LINE L1 -4750 1646 785 4443 45 4 1 chr2 170860591 170860612 -82395971 + L1P2 LINE L1 5097 5116 -1038 2341 54 0 7 chr2 170860612 170860909 -82395674 - L1PA6 LINE L1 -8 6146 5852 4443 45 4 1 chr2 170860909 170861586 -82394997 + L1P2 LINE L1 5116 5799 -355 455 290 39 77 chr2 170862347 170862874 -82393709 + L1MC4 LINE L1 7215 7743 -299 1708 121 52 33 chr2 170862874 170863199 -82393384 - AluSx SINE Alu 0 335 6 455 290 39 77 chr2 170863199 170863352 -82393231 + L1MC4 LINE L1 7743 7900 -142 21 0 0 0 chr2 170865051 170865072 -82391511 + AT_rich Low_complexity Low_complexity 1 21 0 379 162 68 0 chr2 170865164 170865238 -82391345 + MADE1 DNA Mariner 2 80 0 948 43 0 0 chr2 170865476 170865591 -82390992 - L1PA2 LINE L1 -3 6152 6038 456 271 50 8 chr2 170867626 170867772 -82388811 + MIR SINE MIR 37 187 -65 1934 135 3 7 chr2 170869708 170869996 -82386587 + AluSx SINE Alu 1 287 -25 1739 264 107 57 chr2 170870328 170872380 -82384203 - L1ME3A LINE L1 -2 6168 4002 420 251 161 41 chr2 170872701 170873067 -82383516 - L1MC5 LINE L1 -48 7913 7504 6311 171 8 13 chr2 170873126 170874345 -82382238 + L1PA13 LINE L1 4186 5403 -760 2475 110 8 26 chr2 170874345 170874727 -82381856 - THE1C LTR MaLR 0 375 1 6311 171 8 13 chr2 170874727 170875479 -82381104 + L1PA13 LINE L1 5403 6158 -5 392 259 92 11 chr2 170875522 170875696 -82380887 - L1MC5 LINE L1 -474 7487 7300 216 0 0 0 chr2 170877420 170877444 -82379139 + (T)n Simple_repeat Simple_repeat 1 24 0 22 0 0 0 chr2 170877781 170877803 -82378780 + AT_rich Low_complexity Low_complexity 1 22 0 28 0 0 0 chr2 170878053 170878081 -82378502 + AT_rich Low_complexity Low_complexity 1 28 0 759 118 0 8 chr2 170878081 170878200 -82378383 - AluSp/q SINE Alu -22 291 174 285 258 73 73 chr2 170879487 170879611 -82376972 - L2 LINE L2 -30 3283 3160 255 292 125 0 chr2 170879621 170879717 -82376866 - L2 LINE L2 -256 3057 2950 271 125 107 0 chr2 170880112 170880168 -82376415 + L1PA16 LINE L1 6102 6163 -3 27 0 0 0 chr2 170880447 170880474 -82376109 + AT_rich Low_complexity Low_complexity 1 27 0 439 306 93 29 chr2 170882064 170882342 -82374241 - L3b LINE CR1 -123 1460 1165 347 216 63 0 chr2 170883393 170883504 -82373079 + L1ME4a LINE L1 6002 6119 -2 2236 78 10 10 chr2 170883599 170883895 -82372688 + AluSc SINE Alu 1 296 -13 532 326 69 16 chr2 170884658 170884903 -82371680 + MIR SINE MIR 1 258 -4 299 340 70 83 chr2 170884905 170885205 -82371378 - L2 LINE L2 -5 3267 2972 457 301 181 26 chr2 170885209 170885595 -82370988 - MLT1K LTR MaLR -29 559 114 759 341 203 18 chr2 170885681 170886667 -82369916 - L2 LINE L2 -400 2914 1747 1051 224 33 12 chr2 170886749 170886994 -82369589 - MIR SINE MIR -10 252 3 422 299 71 0 chr2 170887101 170887255 -82369328 - MLT1J LTR MaLR -11 500 336 1304 175 28 55 chr2 170887301 170887627 -82368956 + MER33 DNA MER1_type 2 318 -6 809 301 106 0 chr2 170887632 170887888 -82368695 - MLT1J LTR MaLR -228 283 1 387 0 0 0 chr2 170888037 170888080 -82368503 + (TG)n Simple_repeat Simple_repeat 2 44 0 914 337 50 31 chr2 170888080 170888697 -82367886 - L2 LINE L2 -1980 1334 706 412 227 64 9 chr2 170888763 170888873 -82367710 + LTR40b LTR ERVL 1 116 -346 456 271 25 30 chr2 170888994 170889193 -82367390 - L2 LINE L2 -2411 903 706 1753 240 26 9 chr2 170889259 170889713 -82366870 + LTR40b LTR ERVL 1 462 0 2083 106 7 7 chr2 170891789 170892082 -82364501 + AluSx SINE Alu 9 301 -11 1232 236 85 14 chr2 170892637 170893073 -82363510 - MLT1C LTR MaLR 0 467 1 26 0 0 0 chr2 170893148 170893174 -82363409 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr2 170894061 170894089 -82362494 + AT_rich Low_complexity Low_complexity 1 28 0 247 390 59 7 chr2 170894759 170894895 -82361688 - MIR3 SINE MIR -33 175 33 228 214 0 0 chr2 170895780 170895822 -82360761 + CT-rich Low_complexity Low_complexity 1 42 0 1081 241 18 9 chr2 170897116 170897344 -82359239 + MIR SINE MIR 1 230 -32 1695 179 0 38 chr2 170898260 170898484 -82358099 + AluJo SINE Alu 6 237 -75 2303 126 39 8 chr2 170898484 170898848 -82357735 - THE1C LTR MaLR 0 375 1 9267 122 42 45 chr2 170898848 170900432 -82356151 - THE1C-int LTR MaLR 0 1580 1 2415 110 39 8 chr2 170900432 170900796 -82355787 - THE1C LTR MaLR 0 375 1 1695 179 0 38 chr2 170900796 170900929 -82355654 + AluJo SINE Alu 234 312 0 249 353 166 7 chr2 170901454 170901732 -82354851 + L3 LINE CR1 645 966 -611 3291 164 11 31 chr2 170901974 170902590 -82353993 + MER6A DNA MER2_type 2 605 0 243 292 67 45 chr2 170904354 170904443 -82352140 - L2 LINE L2 -33 3280 3190 1226 251 143 13 chr2 170904601 170904980 -82351603 + L1M1 LINE L1 10 437 -6412 7791 258 29 15 chr2 170905159 170907182 -82349401 + L1M1 LINE L1 676 2727 -4122 * 10342 197 20 23 chr2 170907179 170910134 -82346449 + L1M1 LINE L1 3423 6367 -638 1906 233 58 39 chr2 170910161 170910909 -82345674 + L1MC/D LINE L1 4663 5436 -743 25 31 0 0 chr2 170910950 170910982 -82345601 + AT_rich Low_complexity Low_complexity 1 32 0 322 321 41 56 chr2 170911079 170911275 -82345308 - L1 LINE L1 -1219 4927 4735 253 342 55 62 chr2 170911872 170912144 -82344439 - L2 LINE L2 -2359 955 686 307 306 81 8 chr2 170912212 170912336 -82344247 + Charlie1a DNA MER1_type 2 134 -1321 5348 210 30 19 chr2 170912354 170914487 -82342096 + L1MB7 LINE L1 4023 6178 -6 4885 185 70 42 chr2 170914491 170914621 -82341962 + Charlie1a DNA MER1_type 144 269 -2492 2428 75 3 7 chr2 170914621 170914927 -82341656 + AluSq SINE Alu 1 305 -8 4885 185 70 42 chr2 170914927 170914988 -82341595 + Charlie1a DNA MER1_type 269 327 -2434 2434 67 3 0 chr2 170914988 170915286 -82341297 + AluY SINE Alu 2 300 -11 4885 185 70 42 chr2 170915286 170916370 -82340213 + Charlie1a DNA MER1_type 327 1455 0 372 278 46 38 chr2 170916484 170916660 -82339923 - MIR SINE MIR -63 145 5 6426 108 87 33 chr2 170916660 170917804 -82338779 + pTR5 LTR ERV1 821 2025 -413 361 163 0 54 chr2 170917804 170917896 -82338687 + LTR30 LTR ERV1 544 630 -92 1538 88 0 31 chr2 170917905 170918133 -82338450 + pTR5 LTR ERV1 172 392 -2046 258 379 46 17 chr2 170918260 170918434 -82338149 - MIR SINE MIR -18 244 66 25 0 0 0 chr2 170918599 170918624 -82337959 + AT_rich Low_complexity Low_complexity 1 25 0 23 68 0 0 chr2 170918682 170918726 -82337857 + AT_rich Low_complexity Low_complexity 1 44 0 223 65 43 43 chr2 170918753 170918799 -82337784 + CT-rich Low_complexity Low_complexity 3 48 0 2089 174 49 35 chr2 170918839 170919292 -82337291 + LOR1b LTR ERV1 1 459 -2 767 200 76 12 chr2 170919292 170919445 -82337138 - Charlie1 DNA MER1_type -5 2756 2579 3625 164 23 67 chr2 170919445 170920266 -82336317 + LTR1 LTR ERV1 1 785 0 767 200 76 12 chr2 170920266 170920362 -82336221 - Charlie1 DNA MER1_type -182 2579 2491 226 130 19 19 chr2 170920363 170920417 -82336166 + (TA)n Simple_repeat Simple_repeat 1 54 0 4394 103 93 110 chr2 170920662 170922103 -82334480 + pTR5 LTR ERV1 66 2438 0 747 297 39 31 chr2 170922732 170922991 -82333592 + MIR SINE MIR 2 262 0 353 306 87 22 chr2 170923515 170923744 -82332839 + HAL1 LINE L1 1091 1334 -1173 337 341 53 0 chr2 170924108 170924278 -82332305 + MIR SINE MIR 74 252 -10 22 0 0 0 chr2 170924531 170924553 -82332030 + AT_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr2 170925052 170925088 -82331495 + AT_rich Low_complexity Low_complexity 1 36 0 503 248 55 45 chr2 170926062 170926264 -82330319 - MIR SINE MIR -56 206 3 230 284 239 9 chr2 170926488 170926597 -82329986 - MIR SINE MIR -78 184 51 387 231 0 0 chr2 170926723 170926814 -82329769 + L1M4 LINE L1 4519 4609 -1537 591 295 27 16 chr2 170926814 170926997 -82329586 + L3 LINE CR1 1308 1492 -85 526 317 58 8 chr2 170927122 170927362 -82329221 + MIR SINE MIR 11 262 0 1514 256 27 17 chr2 170928504 170928981 -82327602 - L1ME1 LINE L1 -8 6438 5957 376 203 38 0 chr2 170928981 170929060 -82327523 - MLT1A1 LTR MaLR -2 363 282 * 495 127 13 0 chr2 170929051 170929130 -82327453 - MLT1A1 LTR MaLR -285 80 1 7381 246 54 45 chr2 170929145 170929625 -82326958 - L1ME1 LINE L1 -504 5942 5468 30 0 0 0 chr2 170929625 170929655 -82326928 + AT_rich Low_complexity Low_complexity 1 30 0 7381 246 54 45 chr2 170929655 170932554 -82324029 - L1ME1 LINE L1 -978 5468 2508 2082 110 27 10 chr2 170932554 170932855 -82323728 - AluSg SINE Alu -4 306 1 7381 246 54 45 chr2 170932855 170933353 -82323230 - L1ME1 LINE L1 -3938 2508 2016 872 269 6 10 chr2 170933357 170933666 -82322917 - L1ME1 LINE L1 -4620 1987 1494 1783 156 53 35 chr2 170933667 170934006 -82322577 + MER21B LTR ERV1 503 847 -16 5296 153 22 3 chr2 170934294 170935291 -82321292 + L1PA15 LINE L1 5156 6165 0 220 293 17 0 chr2 170937097 170937155 -82319428 - L2 LINE L2 -5 3308 3250 24 32 0 0 chr2 170937979 170938010 -82318573 + AT_rich Low_complexity Low_complexity 1 31 0 183 114 0 0 chr2 170938233 170938268 -82318315 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 2141 91 0 0 chr2 170938575 170938851 -82317732 - AluSg SINE Alu -13 297 22 229 372 131 25 chr2 170938865 170939147 -82317436 - L3 LINE CR1 -181 1396 1085 454 270 179 20 chr2 170939344 170939540 -82317043 - L3 LINE CR1 -859 718 492 231 325 114 0 chr2 170939570 170939693 -82316890 - MIR SINE MIR -79 183 47 307 260 34 75 chr2 170939712 170939752 -82316831 - L3 LINE CR1 -1136 441 401 2135 163 20 0 chr2 170939752 170940109 -82316474 + MER47A DNA MER2_type 2 365 -1 307 260 34 75 chr2 170940109 170940214 -82316369 - L3 LINE CR1 -1176 401 302 271 287 117 57 chr2 170940190 170940455 -82316128 + L2 LINE L2 3033 3313 0 * 365 289 25 63 chr2 170941022 170941181 -82315402 - L2 LINE L2 -192 3080 2928 315 387 46 13 chr2 170941560 170941865 -82314718 - L2 LINE L2 -1043 2271 1957 1249 160 28 0 chr2 170941887 170942099 -82314484 + AluJo SINE Alu 82 299 -13 196 185 15 31 chr2 170942101 170942166 -82314417 + GA-rich Low_complexity Low_complexity 3 66 0 215 221 182 39 chr2 170942187 170942264 -82314319 - MIR SINE MIR -25 237 150 277 163 102 0 chr2 170942453 170942502 -82314081 - MIR SINE MIR -113 149 96 681 318 85 41 chr2 170944648 170945104 -82311479 + L2 LINE L2 2641 3141 -172 2230 132 27 39 chr2 170945104 170945512 -82311071 - MER57A LTR ERV1 0 403 1 681 318 85 41 chr2 170945512 170945693 -82310890 + L2 LINE L2 3141 3313 0 3042 204 39 14 chr2 170946859 170947480 -82309103 - MER82 DNA MER2_type -6 647 12 264 30 0 0 chr2 170947491 170947524 -82309059 + (TG)n Simple_repeat Simple_repeat 1 33 0 432 252 233 14 chr2 170947755 170947965 -82308618 + MIR SINE MIR 7 262 0 192 40 0 0 chr2 170948037 170948062 -82308521 + (TTG)n Simple_repeat Simple_repeat 1 25 0 191 204 23 23 chr2 170948441 170948485 -82308098 + MIR SINE MIR 117 160 -102 1883 209 9 95 chr2 170948652 170949221 -82307362 + MLT2B1 LTR ERVL 1 520 0 180 111 0 0 chr2 170951115 170951142 -82305441 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 802 291 77 52 chr2 170953457 170953935 -82302648 - MLT1L LTR MaLR -9 606 117 554 259 113 87 chr2 170954153 170954523 -82302060 - MLT1J LTR MaLR -106 405 26 647 314 103 0 chr2 170957201 170957405 -82299178 + MIR SINE MIR 11 235 -27 613 225 126 50 chr2 170957687 170957909 -82298674 - MLT1F LTR MaLR -1 541 303 24 32 0 0 chr2 170958639 170958670 -82297913 + AT_rich Low_complexity Low_complexity 1 31 0 1518 165 55 15 chr2 170958728 170959043 -82297540 - AluSq SINE Alu 0 326 1 1525 143 0 4 chr2 170959603 170959834 -82296749 + AluSq SINE Alu 1 230 -83 536 173 82 9 chr2 170960163 170960273 -82296310 + AluSg/x SINE Alu 192 309 0 196 51 26 26 chr2 170960276 170960315 -82296268 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 2065 138 0 3 chr2 170960350 170960648 -82295935 - AluSg SINE Alu -11 299 3 24 0 0 0 chr2 170960755 170960779 -82295804 + AT_rich Low_complexity Low_complexity 1 24 0 3853 119 12 9 chr2 170960794 170961357 -82295226 - MER61E LTR ERV1 -4 565 1 384 281 144 0 chr2 170962543 170962682 -82293901 - MIR SINE MIR -2 260 102 1996 186 24 3 chr2 170962838 170963214 -82293369 - MLT1C LTR MaLR -81 386 3 353 203 68 0 chr2 170963921 170963995 -82292588 + MIR SINE MIR 184 262 0 21 57 0 0 chr2 170964364 170964399 -82292184 + AT_rich Low_complexity Low_complexity 1 35 0 586 256 40 57 chr2 170964952 170965128 -82291455 + MER5B DNA MER1_type 4 176 -2 2323 66 7 3 chr2 170965159 170965461 -82291122 + AluY SINE Alu 1 303 -8 1534 223 52 63 chr2 170966316 170966778 -82289805 - MER31B LTR ERV1 -9 457 1 432 296 31 30 chr2 170967920 170968066 -82288517 + MIR SINE MIR 12 157 -65 298 318 40 0 chr2 170968372 170968498 -82288085 + MIR SINE MIR 51 181 -81 243 0 0 0 chr2 170968506 170968533 -82288050 + (CA)n Simple_repeat Simple_repeat 2 28 0 195 42 0 0 chr2 170968532 170968556 -82288027 + (GA)n Simple_repeat Simple_repeat 2 25 0 * 2218 116 6 0 chr2 170968678 170968989 -82287594 + AluSq SINE Alu 1 313 0 1841 181 9 20 chr2 170969041 170969383 -82287200 - MLT1A1 LTR MaLR -26 339 2 264 111 0 0 chr2 170969400 170969445 -82287138 + (CA)n Simple_repeat Simple_repeat 2 46 0 2830 236 56 31 chr2 170969446 170970673 -82285910 + L1ME1 LINE L1 4840 6096 -70 37 23 0 0 chr2 170971079 170971123 -82285460 + AT_rich Low_complexity Low_complexity 1 44 0 1023 117 31 79 chr2 170971127 170971382 -82285201 - L1MA7 LINE L1 0 6291 6050 5776 78 39 32 chr2 170971382 170972201 -82284382 - LTR12 LTR ERV1 0 826 2 1023 117 31 79 chr2 170972201 170972236 -82284347 - L1MA7 LINE L1 -241 6050 6015 197 341 95 40 chr2 170973326 170973452 -82283131 + L2 LINE L2 3140 3272 0 486 201 176 4 chr2 170973580 170973742 -82282841 + MIR SINE MIR 58 249 -13 352 343 41 23 chr2 170973776 170973948 -82282635 - MIR SINE MIR -54 208 34 494 304 85 20 chr2 170974270 170974684 -82281899 + MLT1L LTR MaLR 164 615 0 262 226 38 0 chr2 170975334 170975387 -82281196 + L2 LINE L2 3246 3300 -13 2090 86 24 3 chr2 170975427 170975717 -82280866 + AluSc SINE Alu 1 296 -13 2135 59 79 7 chr2 170975917 170976207 -82280376 + AluY SINE Alu 1 311 0 313 284 137 37 chr2 170976340 170976530 -82280053 - HAL1 LINE L1 -1622 885 677 1185 302 73 40 chr2 170976848 170977558 -82279025 - L2 LINE L2 -4 3309 2579 1444 225 66 35 chr2 170977558 170978011 -82278572 - MLT1C LTR MaLR 0 467 1 1185 302 73 40 chr2 170978011 170978135 -82278448 - L2 LINE L2 -734 2579 2461 660 284 31 22 chr2 170978137 170978366 -82278217 - HAL1 LINE L1 -2275 232 2 339 227 68 0 chr2 170978381 170978469 -82278114 - MER69 DNA AcHobo 0 2526 2433 1969 246 58 58 chr2 170978476 170979135 -82277448 + Zaphod DNA AcHobo 2 660 -3371 2012 224 87 32 chr2 170979138 170979848 -82276735 + Zaphod DNA AcHobo 3283 4031 0 1079 206 96 16 chr2 170979858 170980232 -82276351 - MER69 DNA AcHobo -110 2416 2013 1541 246 82 39 chr2 170980250 170980949 -82275634 - MER69 DNA AcHobo -98 79 6 269 298 22 56 chr2 170981881 170982059 -82274524 + MIR SINE MIR 41 212 -50 39 50 0 0 chr2 170982070 170982130 -82274453 + AT_rich Low_complexity Low_complexity 1 60 0 204 313 25 25 chr2 170982936 170983016 -82273567 - L2 LINE L2 -537 2777 2698 254 274 28 47 chr2 170983912 170984018 -82272565 + MLT1L LTR MaLR 165 268 -347 2326 109 0 0 chr2 170984027 170984331 -82272252 + AluSg SINE Alu 1 304 -6 1814 213 95 30 chr2 170984518 170984992 -82271591 + MLT1D LTR MaLR 1 505 0 3660 169 79 21 chr2 170986038 170986218 -82270365 + MER6 DNA MER2_type 32 200 -665 210 37 0 0 chr2 170986218 170986245 -82270338 + (TG)n Simple_repeat Simple_repeat 1 27 0 3660 169 79 21 chr2 170986245 170986771 -82269812 + MER6 DNA MER2_type 200 790 -75 1678 157 22 44 chr2 170986771 170987089 -82269494 - AluJo SINE Alu -1 311 1 3660 169 79 21 chr2 170987089 170987170 -82269413 + MER6 DNA MER2_type 790 865 0 238 361 121 0 chr2 170987260 170987426 -82269157 + MIR SINE MIR 77 262 0 2444 81 0 10 chr2 170988301 170988608 -82267975 - AluSq SINE Alu -9 304 1 513 252 20 13 chr2 170989463 170989614 -82266969 + MER69A DNA AcHobo 1 152 -25 861 298 144 33 chr2 170989644 170990191 -82266392 + Charlie2 DNA MER1_type 1 608 -2254 714 222 114 19 chr2 170990292 170990616 -82265967 + Charlie2a DNA MER1_type 1473 1827 -1035 2388 206 63 21 chr2 170990744 170991520 -82265063 + Charlie2a DNA MER1_type 2004 2812 -50 319 287 9 56 chr2 170991968 170992076 -82264507 + L2 LINE L2 3210 3312 -1 568 313 0 0 chr2 170992803 170992947 -82263636 + MIR SINE MIR 36 179 -83 1853 56 0 9 chr2 170993279 170993511 -82263072 - AluY SINE Alu -7 304 75 25 65 0 0 chr2 170993709 170993755 -82262828 + AT_rich Low_complexity Low_complexity 1 46 0 351 0 0 0 chr2 170994896 170994935 -82261648 + (CA)n Simple_repeat Simple_repeat 2 40 0 201 216 0 0 chr2 170997381 170997418 -82259165 + MIR SINE MIR 117 153 -109 27 29 0 0 chr2 170999949 170999983 -82256600 + AT_rich Low_complexity Low_complexity 1 34 0 23 0 0 0 chr2 171000826 171000849 -82255734 + AT_rich Low_complexity Low_complexity 1 23 0 305 293 131 20 chr2 171000858 171000957 -82255626 - MER91A DNA MER1_type -1 195 86 787 365 70 6 chr2 171001096 171001438 -82255145 - MER115 DNA AcHobo -327 366 3 615 264 204 0 chr2 171001464 171001744 -82254839 - LTR33 LTR ERVL -173 348 12 24 0 0 0 chr2 171001845 171001869 -82254714 + AT_rich Low_complexity Low_complexity 1 24 0 252 0 0 0 chr2 171002159 171002187 -82254396 + (T)n Simple_repeat Simple_repeat 1 28 0 2057 123 0 44 chr2 171002281 171002598 -82253985 - AluSx SINE Alu -9 303 1 24 0 0 0 chr2 171002636 171002660 -82253923 + AT_rich Low_complexity Low_complexity 1 24 0 243 195 78 13 chr2 171002913 171002990 -82253593 - MER103 DNA DNA -51 115 34 423 316 68 11 chr2 171004774 171004951 -82251632 - MIR SINE MIR -28 234 48 231 114 0 0 chr2 171005844 171005861 -82250722 + (CA)n Simple_repeat Simple_repeat 1 52 0 231 114 0 0 chr2 171005861 171005896 -82250687 + (CA)n Simple_repeat Simple_repeat 2 36 0 852 222 17 11 chr2 171006843 171007019 -82249564 - MER5A DNA MER1_type -12 177 1 1861 149 7 0 chr2 171007186 171007490 -82249093 + AluSx SINE Alu 1 306 0 23 33 0 0 chr2 171008309 171008339 -82248244 + AT_rich Low_complexity Low_complexity 1 30 0 29 28 0 0 chr2 171008384 171008420 -82248163 + AT_rich Low_complexity Low_complexity 1 36 0 185 333 0 0 chr2 171008919 171008973 -82247610 + L2 LINE L2 3250 3303 -10 357 235 167 53 chr2 171009018 171009150 -82247433 + MIR3 SINE MIR 53 199 -9 272 296 130 19 chr2 171009734 171009842 -82246741 + L2 LINE L2 3153 3272 0 21 36 0 0 chr2 171010550 171010578 -82246005 + AT_rich Low_complexity Low_complexity 1 28 0 187 405 11 34 chr2 171010645 171010734 -82245849 - L2 LINE L2 -76 3196 3110 264 342 35 9 chr2 171011909 171012023 -82244560 + MIR SINE MIR 138 254 -8 444 286 73 73 chr2 171013408 171013600 -82242983 - MIR SINE MIR -5 257 66 911 187 0 0 chr2 171013715 171013886 -82242697 + MER2 DNA MER2_type 40 210 -135 434 208 0 0 chr2 171013914 171013991 -82242592 + MER2 DNA MER2_type 269 345 0 369 105 0 0 chr2 171014013 171014070 -82242513 + MER53 DNA DNA 131 187 -2 21 0 0 0 chr2 171015264 171015285 -82241298 + AT_rich Low_complexity Low_complexity 1 21 0 2066 213 82 43 chr2 171015286 171015362 -82241221 + MER21B LTR ERV1 17 89 -774 1740 114 4 0 chr2 171015362 171015599 -82240984 - AluSq SINE Alu -11 302 65 2066 213 82 43 chr2 171015599 171016105 -82240478 + MER21B LTR ERV1 89 622 -241 948 101 0 0 chr2 171016106 171016244 -82240339 + (TTCC)n Simple_repeat Simple_repeat 4 141 0 346 279 14 71 chr2 171017149 171017289 -82239294 - MIR SINE MIR -51 211 80 758 322 131 12 chr2 171018219 171018647 -82237936 - MLT1K LTR MaLR -92 496 18 223 370 9 37 chr2 171019925 171020033 -82236550 + L2 LINE L2 3165 3269 -3 2035 101 4 4 chr2 171020339 171020606 -82235977 - AluSg1 SINE Alu -42 267 1 195 100 0 0 chr2 171020633 171020663 -82235920 + (ATGGTG)n Simple_repeat Simple_repeat 6 35 0 463 182 52 52 chr2 171020835 171021104 -82235479 - L1M4 LINE L1 -1944 4202 3809 * 1046 259 142 2 chr2 171021102 171021504 -82235079 - L1M4 LINE L1 -3434 2712 2255 * 1461 162 86 37 chr2 171021501 171021523 -82235060 + L1M2 LINE L1 4203 4222 -1924 291 65 0 48 chr2 171021523 171021585 -82234998 + (TA)n Simple_repeat Simple_repeat 2 60 0 1461 162 86 37 chr2 171021585 171021945 -82234638 + L1M2 LINE L1 4222 4604 -1542 * 35760 34 1 0 chr2 171021944 171027251 -82229332 + L1PA3 LINE L1 841 6150 -5 3125 167 72 14 chr2 171027257 171028161 -82228422 + L1M2 LINE L1 4600 5557 -734 634 251 158 57 chr2 171028756 171029179 -82227404 - MLT1H LTR MaLR 0 549 84 310 333 99 9 chr2 171030484 171030595 -82225988 - L2 LINE L2 -5 3267 3147 448 174 23 0 chr2 171030656 171030742 -82225841 - MER33 DNA MER1_type -236 88 1 400 207 23 0 chr2 171030956 171031043 -82225540 - MER103 DNA DNA -21 145 57 200 259 29 149 chr2 171031312 171031386 -82225197 + L2 LINE L2 2939 2982 -290 2416 83 7 0 chr2 171031386 171031688 -82224895 + AluSp SINE Alu 5 308 -5 200 259 29 149 chr2 171031688 171031787 -82224796 + L2 LINE L2 2982 3091 -181 1543 92 5 42 chr2 171033575 171033792 -82222791 - AluSq SINE Alu -104 209 1 1298 254 88 99 chr2 171034682 171035236 -82221347 + L1MC4 LINE L1 5975 6534 -1335 2285 95 20 0 chr2 171035236 171035531 -82221052 + AluSc SINE Alu 1 301 -8 1298 254 88 99 chr2 171035531 171036022 -82220561 + L1MC4 LINE L1 6534 7029 -840 227 79 26 0 chr2 171036022 171036060 -82220523 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 1298 254 88 99 chr2 171036060 171036079 -82220504 + L1MC4 LINE L1 7029 7047 -822 1823 143 66 0 chr2 171036079 171036351 -82220232 + AluSx SINE Alu 1 290 -22 1298 254 88 99 chr2 171036351 171036650 -82219933 + L1MC4 LINE L1 7047 7386 -483 1469 141 8 0 chr2 171036723 171036971 -82219612 + Tigger1 DNA MER2_type 1 250 -2168 * 4680 115 21 3 chr2 171036964 171037676 -82218907 + Tigger1 DNA MER2_type 1694 2418 0 1234 265 39 42 chr2 171037677 171038220 -82218363 + L1MC4 LINE L1 7491 8031 -11 21 0 0 0 chr2 171038950 171038971 -82217612 + AT_rich Low_complexity Low_complexity 1 21 0 238 191 0 0 chr2 171039010 171039057 -82217526 + CT-rich Low_complexity Low_complexity 1 47 0 284 309 100 70 chr2 171039885 171040316 -82216267 - L2 LINE L2 -3 3269 2826 2003 241 56 15 chr2 171040377 171040896 -82215687 + MER74A LTR ERVL 5 544 -14 405 0 0 0 chr2 171040902 171040947 -82215636 + (TA)n Simple_repeat Simple_repeat 2 46 0 2306 83 0 7 chr2 171040950 171041252 -82215331 - AluY SINE Alu -11 300 1 702 165 3 5 chr2 171042469 171042620 -82213963 + L1PA8 LINE L1 5996 6162 -10 2316 87 0 3 chr2 171042651 171042950 -82213633 + AluSc SINE Alu 1 298 -11 21 0 0 0 chr2 171043192 171043213 -82213370 + AT_rich Low_complexity Low_complexity 1 21 0 465 212 12 0 chr2 171044544 171044629 -82211954 + MER5A DNA MER1_type 102 187 -2 732 173 135 0 chr2 171044740 171044896 -82211687 + MER20 DNA MER1_type 36 212 -7 233 261 31 0 chr2 171044899 171044964 -82211619 + MLT1L LTR MaLR 190 256 -359 389 325 22 15 chr2 171045544 171045812 -82210771 - HAL1 LINE L1 -737 1770 1501 21 36 0 0 chr2 171045915 171045943 -82210640 + AT_rich Low_complexity Low_complexity 1 28 0 946 123 36 55 chr2 171045947 171046166 -82210417 - L1MA9 LINE L1 -17 6295 6081 2233 117 0 0 chr2 171046369 171046676 -82209907 - AluSg SINE Alu -3 307 1 560 249 43 22 chr2 171047070 171047255 -82209328 + MER5A DNA MER1_type 1 189 0 335 309 21 0 chr2 171047930 171048024 -82208559 - MER5A DNA MER1_type -84 105 10 1681 91 53 11 chr2 171050085 171050339 -82206244 - L1PA10 LINE L1 -234 5934 5667 1248 46 0 0 chr2 171050339 171050488 -82206095 + L1PA10 LINE L1 6013 6164 -4 618 305 73 7 chr2 171050540 171050812 -82205771 - MLT1J1 LTR MaLR -4 442 153 182 222 16 79 chr2 171050933 171050996 -82205587 + MIR SINE MIR 21 79 -129 233 330 80 18 chr2 171051665 171051777 -82204806 + L2 LINE L2 2227 2345 -969 470 337 53 53 chr2 171051925 171052717 -82203866 + L1MEc LINE L1 170 961 -5435 840 76 84 30 chr2 171052717 171052848 -82203735 - MER85 DNA T2_type -1 138 1 470 337 53 53 chr2 171052848 171052885 -82203698 + L1MEc LINE L1 961 997 -5399 1718 115 57 11 chr2 171052885 171053164 -82203419 - AluSg SINE Alu -18 292 1 470 337 53 53 chr2 171053164 171053720 -82202863 + L1MEc LINE L1 996 1556 -4840 2098 103 23 3 chr2 171053907 171054209 -82202374 + AluSc SINE Alu 1 308 -1 2156 62 79 7 chr2 171054397 171054687 -82201896 + AluY SINE Alu 1 311 0 252 284 137 37 chr2 171054819 171055009 -82201574 - HAL1 LINE L1 -1622 885 677 1218 302 73 40 chr2 171055327 171056037 -82200546 - L2 LINE L2 -4 3309 2579 1441 225 66 35 chr2 171056037 171056490 -82200093 - MLT1C LTR MaLR 0 467 1 1218 302 73 40 chr2 171056490 171056614 -82199969 - L2 LINE L2 -734 2579 2461 565 279 35 26 chr2 171056616 171056845 -82199738 - HAL1 LINE L1 -2275 232 2 305 227 68 0 chr2 171056860 171056948 -82199635 - MER69 DNA AcHobo 0 2526 2433 1759 246 58 58 chr2 171056955 171057614 -82198969 + Zaphod DNA AcHobo 2 660 -3371 1748 224 87 32 chr2 171057617 171058327 -82198256 + Zaphod DNA AcHobo 3283 4031 0 961 203 96 16 chr2 171058337 171058711 -82197872 - MER69 DNA AcHobo -110 2416 2013 1779 234 131 36 chr2 171058729 171059428 -82197155 - MER69 DNA AcHobo -98 79 6 269 298 22 56 chr2 171060360 171060538 -82196045 + MIR SINE MIR 41 212 -50 39 50 0 0 chr2 171060549 171060609 -82195974 + AT_rich Low_complexity Low_complexity 1 60 0 204 313 25 25 chr2 171061415 171061495 -82195088 - L2 LINE L2 -537 2777 2698 254 274 28 47 chr2 171062391 171062497 -82194086 + MLT1L LTR MaLR 165 268 -347 2326 109 0 0 chr2 171062506 171062810 -82193773 + AluSg SINE Alu 1 304 -6 1814 213 95 30 chr2 171062997 171063471 -82193112 + MLT1D LTR MaLR 1 505 0 3675 167 79 21 chr2 171064517 171064697 -82191886 + MER6 DNA MER2_type 32 200 -665 210 37 0 0 chr2 171064697 171064724 -82191859 + (TG)n Simple_repeat Simple_repeat 1 27 0 3675 167 79 21 chr2 171064724 171065250 -82191333 + MER6 DNA MER2_type 200 790 -75 1651 160 22 44 chr2 171065250 171065568 -82191015 - AluJo SINE Alu -1 311 1 3675 167 79 21 chr2 171065568 171065649 -82190934 + MER6 DNA MER2_type 790 865 0 238 361 121 0 chr2 171065739 171065905 -82190678 + MIR SINE MIR 77 262 0 2454 78 0 10 chr2 171066780 171067087 -82189496 - AluSq SINE Alu -9 304 1 513 252 20 13 chr2 171067942 171068093 -82188490 + MER69A DNA AcHobo 1 152 -25 861 298 144 33 chr2 171068123 171068670 -82187913 + Charlie2 DNA MER1_type 1 608 -2254 725 219 114 19 chr2 171068771 171069095 -82187488 + Charlie2a DNA MER1_type 1473 1827 -1035 2399 205 63 21 chr2 171069223 171069999 -82186584 + Charlie2a DNA MER1_type 2004 2812 -50 319 287 9 56 chr2 171070447 171070555 -82186028 + L2 LINE L2 3210 3312 -1 541 310 0 7 chr2 171071283 171071428 -82185155 + MIR SINE MIR 36 179 -83 1795 58 0 9 chr2 171071760 171071985 -82184598 - AluY SINE Alu -14 297 75 25 65 0 0 chr2 171072183 171072229 -82184354 + AT_rich Low_complexity Low_complexity 1 46 0 315 0 0 0 chr2 171073370 171073405 -82183178 + (CA)n Simple_repeat Simple_repeat 2 36 0 201 216 0 0 chr2 171075849 171075886 -82180697 + MIR SINE MIR 117 153 -109 27 29 0 0 chr2 171078417 171078451 -82178132 + AT_rich Low_complexity Low_complexity 1 34 0 23 0 0 0 chr2 171079294 171079317 -82177266 + AT_rich Low_complexity Low_complexity 1 23 0 305 293 131 20 chr2 171079326 171079425 -82177158 - MER91A DNA MER1_type -1 195 86 787 365 70 6 chr2 171079564 171079906 -82176677 - MER115 DNA AcHobo -327 366 3 615 264 204 0 chr2 171079932 171080212 -82176371 - LTR33 LTR ERVL -173 348 12 24 0 0 0 chr2 171080313 171080337 -82176246 + AT_rich Low_complexity Low_complexity 1 24 0 252 0 0 0 chr2 171080627 171080655 -82175928 + (T)n Simple_repeat Simple_repeat 1 28 0 2057 123 0 44 chr2 171080749 171081066 -82175517 - AluSx SINE Alu -9 303 1 24 0 0 0 chr2 171081104 171081128 -82175455 + AT_rich Low_complexity Low_complexity 1 24 0 267 195 78 13 chr2 171081381 171081458 -82175125 - MER103 DNA DNA -51 115 34 433 316 68 11 chr2 171083242 171083419 -82173164 - MIR SINE MIR -28 234 48 231 114 0 0 chr2 171084312 171084329 -82172254 + (CA)n Simple_repeat Simple_repeat 1 52 0 231 114 0 0 chr2 171084329 171084364 -82172219 + (CA)n Simple_repeat Simple_repeat 2 36 0 849 222 17 11 chr2 171085311 171085487 -82171096 - MER5A DNA MER1_type -12 177 1 1848 149 7 0 chr2 171085654 171085958 -82170625 + AluSx SINE Alu 1 306 0 23 33 0 0 chr2 171086777 171086807 -82169776 + AT_rich Low_complexity Low_complexity 1 30 0 29 28 0 0 chr2 171086852 171086888 -82169695 + AT_rich Low_complexity Low_complexity 1 36 0 188 352 242 0 chr2 171087350 171087441 -82169142 + L2 LINE L2 3150 3262 -10 355 235 167 53 chr2 171087486 171087618 -82168965 + MIR3 SINE MIR 53 199 -9 270 296 130 19 chr2 171088202 171088310 -82168273 + L2 LINE L2 3153 3272 0 180 273 0 0 chr2 171088463 171088507 -82168076 + MIR SINE MIR 120 163 -99 21 36 0 0 chr2 171089018 171089046 -82167537 + AT_rich Low_complexity Low_complexity 1 28 0 189 405 11 34 chr2 171089113 171089202 -82167381 - L2 LINE L2 -76 3196 3110 498 294 99 18 chr2 171089713 171089934 -82166649 + LTR16A LTR ERVL 207 445 -5 2028 144 0 0 chr2 171090274 171090572 -82166011 - AluSx SINE Alu -14 298 1 220 250 125 0 chr2 171091886 171091982 -82164601 - MIR SINE MIR -9 253 146 555 186 0 0 chr2 171091985 171092082 -82164501 - FRAM SINE Alu -3 173 77 334 247 43 21 chr2 171092084 171092177 -82164406 - MIR SINE MIR -102 160 66 626 263 100 14 chr2 171092847 171093150 -82163433 - MLT1J1 LTR MaLR -107 339 1 423 298 50 46 chr2 171093152 171093255 -82163328 + MIR SINE MIR 41 142 -120 2193 120 0 0 chr2 171093255 171093554 -82163029 + AluSx SINE Alu 1 299 -13 423 298 50 46 chr2 171093554 171093668 -82162915 + MIR SINE MIR 142 259 -3 389 326 22 0 chr2 171093829 171093967 -82162616 - MIR SINE MIR -21 241 101 2060 112 0 49 chr2 171093968 171094273 -82162310 - AluSx SINE Alu -16 296 7 22 56 0 0 chr2 171095495 171095531 -82161052 + AT_rich Low_complexity Low_complexity 1 36 0 183 42 0 0 chr2 171095566 171095590 -82160993 + (CA)n Simple_repeat Simple_repeat 1 24 0 24 32 0 0 chr2 171096657 171096688 -82159895 + AT_rich Low_complexity Low_complexity 1 31 0 219 69 0 0 chr2 171097652 171097681 -82158902 + (CATATA)n Simple_repeat Simple_repeat 5 33 0 241 263 30 12 chr2 171097960 171098060 -82158523 + GA-rich Low_complexity Low_complexity 1 101 0 29 70 0 0 chr2 171098327 171098384 -82158199 + AT_rich Low_complexity Low_complexity 1 57 0 25 51 0 0 chr2 171099712 171099751 -82156832 + AT_rich Low_complexity Low_complexity 1 39 0 203 175 0 0 chr2 171100051 171100091 -82156492 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 22 35 0 0 chr2 171101178 171101207 -82155376 + AT_rich Low_complexity Low_complexity 1 29 0 1830 113 0 43 chr2 171103604 171103886 -82152697 + AluSq SINE Alu 35 304 -9 619 327 40 5 chr2 171104146 171104345 -82152238 - MIR SINE MIR -50 212 7 184 353 164 8 chr2 171104379 171104501 -82152082 + MIR SINE MIR 5 145 -117 613 200 23 31 chr2 171104506 171104636 -82151947 + FLAM_C SINE Alu 3 131 -12 212 237 105 105 chr2 171104658 171104772 -82151811 + MIR SINE MIR 137 250 -12 2393 90 0 0 chr2 171104917 171105217 -82151366 + AluSc SINE Alu 1 300 -9 22 0 0 0 chr2 171105494 171105516 -82151067 + AT_rich Low_complexity Low_complexity 1 22 0 5647 104 5 6 chr2 171105516 171106351 -82150232 - L1PB1 LINE L1 -1 6150 5317 26 30 0 0 chr2 171106859 171106892 -82149691 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr2 171106991 171107012 -82149571 + AT_rich Low_complexity Low_complexity 1 21 0 24 67 0 0 chr2 171107282 171107327 -82149256 + AT_rich Low_complexity Low_complexity 1 45 0 321 89 0 0 chr2 171107835 171107880 -82148703 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 256 355 131 20 chr2 171108323 171108867 -82147716 - L2 LINE L2 -475 2839 2236 42 36 0 0 chr2 171109318 171109374 -82147209 + AT_rich Low_complexity Low_complexity 1 56 0 377 330 9 9 chr2 171109465 171109574 -82147009 + L2 LINE L2 3195 3303 -10 21 36 0 0 chr2 171109615 171109643 -82146940 + AT_rich Low_complexity Low_complexity 1 28 0 2311 295 122 26 chr2 171109880 171110296 -82146287 - L2 LINE L2 -62 3251 2876 7763 128 16 27 chr2 171110296 171111611 -82144972 - HSMAR2 DNA Mariner -1 1301 2 2311 295 122 26 chr2 171111611 171112587 -82143996 - L2 LINE L2 -437 2876 1752 253 204 20 0 chr2 171112594 171112643 -82143940 + L2 LINE L2 2613 2662 -652 1001 290 98 24 chr2 171112646 171113056 -82143527 - MLT1J1 LTR MaLR -5 441 2 254 289 201 29 chr2 171113102 171113306 -82143277 - L2 LINE L2 -1647 1667 1429 5008 156 13 70 chr2 171113830 171114905 -82141678 + L1MA8 LINE L1 5282 6161 -5 372 313 104 18 chr2 171115421 171115580 -82141003 - MLT1I LTR MaLR 0 409 237 576 191 107 28 chr2 171115580 171115758 -82140825 - MER95 LTR ERV 0 431 240 614 282 162 8 chr2 171116719 171116960 -82139623 - LTR16C LTR ERVL 0 491 214 180 0 0 0 chr2 171117472 171117492 -82139091 + (GGAAA)n Simple_repeat Simple_repeat 1 20 0 532 226 136 77 chr2 171117618 171117928 -82138655 - MLT1J2 LTR MaLR -19 431 100 212 266 46 49 chr2 171118040 171118186 -82138397 + MIR SINE MIR 19 154 -62 209 353 16 41 chr2 171118309 171118431 -82138152 + MER5A DNA MER1_type 70 188 -1 200 411 38 19 chr2 171118431 171118586 -82137997 - MIR3 SINE MIR -48 160 3 23 0 0 0 chr2 171118657 171118680 -82137903 + AT_rich Low_complexity Low_complexity 1 23 0 252 309 0 15 chr2 171119032 171119100 -82137483 - L1MCc LINE L1 -5689 734 668 1399 208 98 63 chr2 171119314 171119631 -82136952 - L1MCc LINE L1 -5899 524 183 248 0 0 30 chr2 171119631 171119664 -82136919 + (TG)n Simple_repeat Simple_repeat 1 32 0 1399 208 98 63 chr2 171119664 171119837 -82136746 - L1MCc LINE L1 -6240 183 17 230 81 27 0 chr2 171119918 171119955 -82136628 + (TAG)n Simple_repeat Simple_repeat 1 38 0 2193 235 55 10 chr2 171120659 171121559 -82135024 - L1MCb LINE L1 -4856 1189 568 1530 269 45 31 chr2 171121665 171122216 -82134367 - L1MCb LINE L1 -5486 559 1 376 278 32 29 chr2 171122242 171122438 -82134145 - L1MC4 LINE L1 -889 6934 6730 2165 76 0 28 chr2 171123120 171123301 -82133282 - AluY SINE Alu 0 310 139 2472 81 0 0 chr2 171123301 171123611 -82132972 - AluSg SINE Alu 0 310 1 2165 76 0 28 chr2 171123611 171123747 -82132836 - AluY SINE Alu -171 139 1 198 103 0 0 chr2 171123769 171123798 -82132785 + (CCCCCT)n Simple_repeat Simple_repeat 3 31 0 745 206 15 78 chr2 171123954 171124160 -82132423 + MIR SINE MIR 71 262 0 2162 107 7 10 chr2 171124252 171124551 -82132032 - AluSp SINE Alu -15 298 1 1201 195 0 0 chr2 171127006 171127232 -82129351 + AluJo SINE Alu 86 311 -1 743 284 95 69 chr2 171128146 171128236 -82128347 + MLT1K LTR MaLR 155 241 -347 2712 128 31 0 chr2 171128236 171128651 -82127932 - MSTA LTR MaLR 0 428 1 743 284 95 69 chr2 171128651 171128983 -82127600 + MLT1K LTR MaLR 241 588 0 231 259 19 0 chr2 171129123 171129177 -82127406 + L2 LINE L2 3165 3219 -94 310 321 37 48 chr2 171129479 171129666 -82126917 + MIR SINE MIR 22 206 -56 2291 136 19 8 chr2 171129817 171130177 -82126406 - THE1B LTR MaLR 0 364 1 11260 101 6 8 chr2 171130182 171131757 -82124826 - THE1B-int LTR MaLR -6 1574 3 1465 133 28 28 chr2 171131780 171132029 -82124554 - THE1B LTR MaLR -115 249 1 24 32 0 0 chr2 171133789 171133820 -82122763 + AT_rich Low_complexity Low_complexity 1 31 0 207 146 0 0 chr2 171133857 171133898 -82122685 + (A)n Simple_repeat Simple_repeat 1 41 0 748 216 42 47 chr2 171135266 171135502 -82121081 - L1MC4 LINE L1 0 8042 7808 495 211 10 0 chr2 171135500 171135604 -82120979 + L1MC4a LINE L1 7086 7190 -618 * 667 233 76 156 chr2 171135659 171136029 -82120554 + MER77 LTR ERV1 55 305 -354 2372 51 9 25 chr2 171136029 171136220 -82120363 - AluY SINE Alu -1 310 124 234 0 0 0 chr2 171136220 171136246 -82120337 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 2372 51 9 25 chr2 171136246 171136369 -82120214 - AluY SINE Alu -187 124 1 667 233 76 156 chr2 171136369 171136695 -82119888 + MER77 LTR ERV1 305 655 -4 1449 247 94 15 chr2 171136825 171137311 -82119272 + L1MC4a LINE L1 6163 6310 -49 466 277 76 27 chr2 171137326 171137510 -82119073 + MIR SINE MIR 59 251 -11 1222 226 104 62 chr2 171138344 171138782 -82117801 + MLT2B1 LTR ERVL 1 419 -101 183 100 0 0 chr2 171138782 171138812 -82117771 + (CA)n Simple_repeat Simple_repeat 2 31 0 1222 226 104 62 chr2 171138812 171138831 -82117752 + MLT2B1 LTR ERVL 419 436 -84 189 0 0 0 chr2 171138831 171138852 -82117731 + (CA)n Simple_repeat Simple_repeat 1 21 0 1222 226 104 62 chr2 171138852 171138892 -82117691 + MLT2B1 LTR ERVL 436 520 0 180 0 0 0 chr2 171139800 171139820 -82116763 + (TTTTTG)n Simple_repeat Simple_repeat 3 22 0 185 184 0 26 chr2 171140980 171141018 -82115565 - L2 LINE L2 -35 3237 3201 1773 210 42 22 chr2 171141463 171141958 -82114625 - MLT1D LTR MaLR 0 505 1 237 83 0 0 chr2 171142034 171142070 -82114513 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 22 0 0 0 chr2 171142308 171142330 -82114253 + AT_rich Low_complexity Low_complexity 1 22 0 577 264 111 23 chr2 171143512 171143728 -82112855 + MIR SINE MIR 28 262 0 2026 128 0 4 chr2 171146436 171146755 -82109828 + AluSg SINE Alu 1 318 0 468 267 166 23 chr2 171150665 171150882 -82105701 - MIR SINE MIR -13 249 2 1672 168 10 7 chr2 171152680 171152971 -82103612 - AluJb SINE Alu -20 292 1 288 283 8 33 chr2 171153213 171153333 -82103250 + L1ME3A LINE L1 5773 5889 -281 23 0 0 0 chr2 171153669 171153692 -82102891 + AT_rich Low_complexity Low_complexity 1 23 0 219 69 0 0 chr2 171154346 171154375 -82102208 + (TA)n Simple_repeat Simple_repeat 1 29 0 22 0 0 0 chr2 171157522 171157544 -82099039 + AT_rich Low_complexity Low_complexity 1 22 0 195 340 78 57 chr2 171157821 171157962 -82098621 - MIR3 SINE MIR -62 146 3 227 257 122 40 chr2 171160484 171160558 -82096025 + MIR3 SINE MIR 86 165 -43 205 189 0 0 chr2 171161009 171161046 -82095537 + MER5B DNA MER1_type 7 43 -135 244 267 186 12 chr2 171161057 171161143 -82095440 + MIR SINE MIR 36 136 -126 290 295 72 36 chr2 171161289 171161455 -82095128 + MIR SINE MIR 35 206 -56 183 208 83 21 chr2 171161541 171161589 -82094994 - L2 LINE L2 -5 3308 3258 180 313 55 31 chr2 171161763 171161891 -82094692 + L2 LINE L2 2921 3051 -221 315 0 0 0 chr2 171161950 171161985 -82094598 + (TA)n Simple_repeat Simple_repeat 2 36 0 2066 82 9 73 chr2 171161985 171162315 -82094268 - AluSx SINE Alu -3 309 1 2217 106 7 0 chr2 171162316 171162608 -82093975 - AluSx SINE Alu -9 303 10 1430 179 106 0 chr2 171164566 171164812 -82091771 + AluJo SINE Alu 5 276 -36 645 299 131 47 chr2 171165048 171165665 -82090918 + L2 LINE L2 2626 3313 0 25 31 0 0 chr2 171165783 171165815 -82090768 + AT_rich Low_complexity Low_complexity 1 32 0 25 51 0 0 chr2 171166152 171166191 -82090392 + AT_rich Low_complexity Low_complexity 1 39 0 869 266 53 50 chr2 171166258 171166577 -82090006 + MER21B LTR ERV1 395 714 -149 287 254 50 116 chr2 171166773 171166954 -82089629 - L2 LINE L2 0 3313 3145 268 275 34 7 chr2 171167689 171167838 -82088745 + (TA)n Simple_repeat Simple_repeat 2 154 0 1493 156 38 0 chr2 171169192 171169430 -82087153 - AluJb SINE Alu -20 292 46 187 339 0 0 chr2 171169684 171169743 -82086840 + MIR SINE MIR 42 100 -108 261 0 0 0 chr2 171170420 171170449 -82086134 + (TA)n Simple_repeat Simple_repeat 1 29 0 288 0 0 0 chr2 171170864 171170896 -82085687 + (T)n Simple_repeat Simple_repeat 1 32 0 468 0 0 0 chr2 171171907 171171959 -82084624 + (TCCA)n Simple_repeat Simple_repeat 2 53 0 328 348 61 0 chr2 171171967 171172082 -82084501 - L2 LINE L2 -1 3312 3191 952 142 35 71 chr2 171172284 171172481 -82084102 + MER20 DNA MER1_type 29 218 -1 2279 123 0 0 chr2 171172499 171172808 -82083775 + AluSq SINE Alu 1 309 -4 790 278 75 58 chr2 171173012 171173479 -82083104 - MLT1L LTR MaLR -9 606 132 201 292 125 42 chr2 171173577 171173697 -82082886 - MIR SINE MIR -118 144 15 537 230 85 24 chr2 171174543 171174708 -82081875 - MER5B DNA MER1_type -1 177 3 295 347 72 24 chr2 171175358 171175525 -82081058 - L2 LINE L2 -9 3263 3089 472 248 227 7 chr2 171175941 171176082 -82080501 + MER5A DNA MER1_type 11 182 -7 510 302 52 21 chr2 171176097 171176289 -82080294 - MIR SINE MIR -44 218 21 257 50 0 25 chr2 171177396 171177436 -82079147 + (TTTTA)n Simple_repeat Simple_repeat 1 39 0 4775 29 0 0 chr2 171177436 171177990 -82078593 - L1PA4 LINE L1 -24 6131 5578 1987 29 0 0 chr2 171177988 171178232 -82078351 + L1P2 LINE L1 5291 5534 -621 * 285 302 60 0 chr2 171178486 171178602 -82077981 + MER117 DNA MER1_type 28 150 -47 1851 163 52 19 chr2 171178761 171179124 -82077459 + THE1C LTR MaLR 1 375 0 228 257 95 0 chr2 171179755 171179829 -82076754 - MLT1J2 LTR MaLR -6 444 364 728 174 43 8 chr2 171179853 171179999 -82076584 - MLT1J2 LTR MaLR -305 145 5 238 260 26 26 chr2 171180501 171180578 -82076005 + CT-rich Low_complexity Low_complexity 4 80 0 1721 158 30 27 chr2 171180960 171181257 -82075326 - AluJo SINE Alu -14 298 1 2140 116 0 7 chr2 171182653 171182955 -82073628 + AluY SINE Alu 1 300 -11 600 220 48 18 chr2 171183489 171183657 -82072926 + L1MC5 LINE L1 7753 7925 -36 288 261 84 79 chr2 171184271 171184474 -82072109 - MLT1H LTR MaLR 0 549 346 198 277 21 0 chr2 171184516 171184563 -82072020 + L2 LINE L2 3009 3056 -257 2828 187 131 133 chr2 171184658 171185256 -82071327 - L1MD3 LINE L1 -3 7992 7273 494 244 16 0 chr2 171185256 171185379 -82071204 - MLT1F1 LTR MaLR -442 125 1 2828 187 131 133 chr2 171185379 171185764 -82070819 - L1MD3 LINE L1 -722 7273 6889 282 302 17 70 chr2 171185894 171185921 -82070662 - L1M4 LINE L1 -1944 4202 4175 181 56 28 28 chr2 171185921 171185957 -82070626 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 2415 75 0 0 chr2 171185959 171186251 -82070332 - AluY SINE Alu -19 292 1 282 302 17 70 chr2 171186251 171186392 -82070191 - L1M4 LINE L1 -1972 4174 4040 253 266 0 0 chr2 171186596 171186660 -82069923 - HsTC2 DNA Tc2 -604 1294 1231 350 303 118 84 chr2 171186794 171187150 -82069433 - L1M4 LINE L1 -2324 3822 3437 2252 113 0 0 chr2 171187150 171187460 -82069123 - AluSg SINE Alu 0 310 1 350 303 118 84 chr2 171187460 171187688 -82068895 - L1M4 LINE L1 -2709 3437 3218 731 307 51 18 chr2 171188293 171188567 -82068016 + LTR16B LTR ERVL 176 458 -6 192 40 0 0 chr2 171188916 171188941 -82067642 + (TC)n Simple_repeat Simple_repeat 2 26 0 258 136 0 0 chr2 171188941 171188985 -82067598 + (TG)n Simple_repeat Simple_repeat 2 45 0 869 185 113 5 chr2 171189566 171189761 -82066822 - MER20 DNA MER1_type 0 219 4 364 349 34 0 chr2 171190011 171190160 -82066423 - MIR3 SINE MIR -4 204 51 294 295 108 0 chr2 171191564 171191693 -82064890 - L1ME4a LINE L1 -12 6109 5967 1675 127 0 40 chr2 171191739 171191992 -82064591 + AluSq SINE Alu 2 244 -69 180 77 0 0 chr2 171192220 171192246 -82064337 + (GA)n Simple_repeat Simple_repeat 2 27 0 198 0 0 0 chr2 171193782 171193804 -82062779 + (CAAAA)n Simple_repeat Simple_repeat 3 24 0 2603 46 7 0 chr2 171194255 171194562 -82062021 + AluY SINE Alu 1 309 -2 243 308 88 76 chr2 171196050 171196446 -82060137 - MLT1K LTR MaLR 0 588 188 244 328 68 29 chr2 171196760 171196905 -82059678 + MIR3 SINE MIR 6 153 -67 2190 109 20 0 chr2 171198120 171198423 -82058160 - AluSp SINE Alu -4 309 1 645 210 204 0 chr2 171199681 171199838 -82056745 + MER20 DNA MER1_type 31 219 0 471 259 36 30 chr2 171202828 171202994 -82053589 + L1ME1 LINE L1 5976 6142 -24 766 57 0 19 chr2 171205014 171205120 -82051463 - L1PA5 LINE L1 -3 6151 6048 226 212 0 97 chr2 171205157 171205270 -82051313 + A-rich Low_complexity Low_complexity 3 104 0 3814 148 80 11 chr2 171205444 171206165 -82050418 + LTR1 LTR ERV1 12 782 -3 302 344 68 16 chr2 171206463 171206655 -82049928 + MIR SINE MIR 6 207 -55 385 250 313 10 chr2 171206760 171206952 -82049631 + MIR SINE MIR 10 259 -3 23 0 0 0 chr2 171207342 171207365 -82049218 + AT_rich Low_complexity Low_complexity 1 23 0 739 72 63 0 chr2 171208488 171208599 -82047984 - L1PA12 LINE L1 0 6168 6051 1069 216 33 25 chr2 171208599 171208844 -82047739 - MLT2B3 LTR ERVL -49 505 259 1984 166 6 29 chr2 171208956 171209300 -82047283 + MER1B DNA MER1_type 1 336 -1 527 299 200 44 chr2 171210355 171210760 -82045823 - L2 LINE L2 0 3313 2846 193 311 47 57 chr2 171211200 171211306 -82045277 + MER5A DNA MER1_type 32 136 -53 24 0 0 0 chr2 171212565 171212589 -82043994 + AT_rich Low_complexity Low_complexity 1 24 0 341 267 57 61 chr2 171212835 171213026 -82043557 - MIR SINE MIR -42 220 32 1490 97 0 0 chr2 171213794 171213980 -82042603 + AluSc SINE Alu 1 186 -123 611 103 0 0 chr2 171213980 171214067 -82042516 + AluSp/q SINE Alu 221 307 -6 486 202 0 0 chr2 171214687 171214771 -82041812 + MER5A DNA MER1_type 12 95 -94 249 247 57 44 chr2 171215269 171215427 -82041156 + L1MEc LINE L1 1313 1472 -4924 648 274 55 78 chr2 171215559 171215866 -82040717 + MLT1H LTR MaLR 31 330 -219 422 313 90 10 chr2 171216664 171216971 -82039612 + L1ME LINE L1 5479 5807 -357 239 207 17 17 chr2 171217112 171217170 -82039413 + (TATATG)n Simple_repeat Simple_repeat 3 60 0 238 302 95 69 chr2 171217435 171217551 -82039032 - L2 LINE L2 -4 3268 3150 1727 144 71 37 chr2 171217582 171217908 -82038675 - MER1B DNA MER1_type 0 337 1 376 277 45 0 chr2 171218069 171218181 -82038402 - MIR SINE MIR 0 262 146 2202 193 50 20 chr2 171218355 171218895 -82037688 - L1MA6 LINE L1 -4 6296 5741 294 191 0 0 chr2 171218995 171219042 -82037541 + Tigger3(Golem) DNA MER2_type 2983 3029 0 2089 147 0 29 chr2 171219057 171219404 -82037179 - MER1B DNA MER1_type 0 337 1 1825 154 14 47 chr2 171219405 171219749 -82036834 - MLT2C1 LTR ERVL -62 335 3 937 266 40 9 chr2 171219853 171220079 -82036504 + MIR SINE MIR 21 253 -9 204 239 55 73 chr2 171220704 171220813 -82035770 + L2 LINE L2 3110 3216 -97 214 341 117 68 chr2 171222206 171222514 -82034069 - L2 LINE L2 0 3272 2950 1363 241 149 23 chr2 171222661 171223143 -82033440 - MLT1H LTR MaLR -6 543 1 23 33 0 0 chr2 171225037 171225067 -82031516 + AT_rich Low_complexity Low_complexity 1 30 0 589 336 37 9 chr2 171225167 171225381 -82031202 - MIR SINE MIR -26 236 17 252 143 0 0 chr2 171225627 171225669 -82030914 + (TA)n Simple_repeat Simple_repeat 1 42 0 181 290 0 75 chr2 171225714 171225807 -82030776 + L2 LINE L2 1654 1739 -1575 307 253 46 11 chr2 171225899 171225986 -82030597 - HAL1 LINE L1 -1886 621 532 284 358 52 18 chr2 171226070 171226299 -82030284 - HAL1 LINE L1 -2129 378 142 204 357 32 16 chr2 171227700 171227826 -82028757 + MER5A DNA MER1_type 59 186 -3 205 154 0 26 chr2 171228203 171228242 -82028341 - MIR SINE MIR -50 212 175 2240 146 6 3 chr2 171228276 171228640 -82027943 - MER47A DNA MER2_type 0 366 2 6728 24 0 0 chr2 171228640 171229422 -82027161 - L1HS LINE L1 -1914 4232 3451 * 9680 15 0 1 chr2 171229421 171231325 -82025258 + L1HS LINE L1 4251 6154 -1 29 28 0 0 chr2 171231325 171231361 -82025222 + AT_rich Low_complexity Low_complexity 1 36 0 268 229 43 14 chr2 171232626 171232696 -82023887 + MER102b DNA MER1_type 246 317 -24 237 233 42 33 chr2 171232911 171233031 -82023552 + L1ME LINE L1 5761 5881 -240 411 321 38 0 chr2 171233058 171233189 -82023394 - MER63A DNA MER1_type -3 207 72 3401 186 32 4 chr2 171233290 171233926 -82022657 - L1 LINE L1 -784 5362 4702 2274 105 0 3 chr2 171233926 171234232 -82022351 - AluSc SINE Alu -4 305 1 3401 186 32 4 chr2 171234232 171234315 -82022268 - L1 LINE L1 -1444 4702 4623 1722 258 65 34 chr2 171234311 171234478 -82022105 - L1M2c LINE L1 -4877 2332 2172 * 1750 125 29 36 chr2 171234478 171234759 -82021824 + AluSx SINE Alu 1 279 -33 473 44 15 0 chr2 171234762 171234830 -82021753 + (TAAA)n Simple_repeat Simple_repeat 2 70 0 1722 258 65 34 chr2 171234830 171235332 -82021251 - L1M2c LINE L1 -5038 2171 1638 816 304 88 35 chr2 171235337 171235989 -82020594 - L1M2c LINE L1 -6569 640 10 261 0 0 0 chr2 171235989 171236018 -82020565 + (TG)n Simple_repeat Simple_repeat 2 30 0 391 222 154 99 chr2 171239988 171240150 -82016433 + MIR SINE MIR 21 191 -71 395 361 119 9 chr2 171240564 171240791 -82015792 + MIR SINE MIR 4 255 -7 199 385 152 39 chr2 171240950 171241375 -82015208 - L2 LINE L2 -4 3268 2797 2409 84 7 0 chr2 171241392 171241700 -82014883 + AluSp SINE Alu 1 310 -3 245 139 0 0 chr2 171241989 171242032 -82014551 + 5S rRNA rRNA 1 43 -78 245 139 0 0 chr2 171242043 171242086 -82014497 + 5S rRNA rRNA 1 43 -78 32 43 0 0 chr2 171243408 171243454 -82013129 + AT_rich Low_complexity Low_complexity 1 46 0 856 211 0 6 chr2 171243466 171243632 -82012951 - FRAM SINE Alu -1 165 1 942 262 62 13 chr2 171245235 171245540 -82011043 - MER46C DNA MER2_type -8 330 11 210 253 93 13 chr2 171245688 171245763 -82010820 + L3b LINE CR1 1241 1321 -262 259 232 14 0 chr2 171247078 171247147 -82009436 - L1ME4a LINE L1 -70 6051 5982 262 270 30 10 chr2 171248252 171248352 -82008231 - L1ME4a LINE L1 -448 5673 5572 180 0 0 0 chr2 171248663 171248683 -82007900 + (TTTTTA)n Simple_repeat Simple_repeat 6 25 0 558 153 27 0 chr2 171249013 171249124 -82007459 + L1MB4 LINE L1 6066 6179 -1 520 169 23 153 chr2 171249275 171249452 -82007131 - L1ME1 LINE L1 -5 6555 6402 1848 245 100 28 chr2 171249456 171250524 -82006059 - L1M4 LINE L1 -2734 3412 2268 884 217 16 11 chr2 171250563 171250752 -82005831 - L1ME1 LINE L1 -657 6096 5907 2290 80 0 0 chr2 171251114 171251402 -82005181 + AluY SINE Alu 1 288 -23 334 256 30 30 chr2 171251408 171251541 -82005042 - L1ME1 LINE L1 -996 5544 5412 * 1769 210 30 142 chr2 171251514 171252310 -82004273 - L1ME1 LINE L1 -1756 4784 4078 317 248 47 60 chr2 171252349 171252498 -82004085 - L1ME1 LINE L1 -3563 2977 2831 589 70 0 82 chr2 171252502 171252673 -82003910 + (TA)n Simple_repeat Simple_repeat 2 158 0 512 176 9 9 chr2 171252694 171252802 -82003781 - L1ME1 LINE L1 -3756 2784 2677 340 211 137 0 chr2 171252804 171252899 -82003684 - L1ME1 LINE L1 -6384 156 49 3677 226 42 14 chr2 171252928 171254627 -82001956 - L1MB8 LINE L1 -6 6172 4425 1320 126 0 0 chr2 171254627 171254818 -82001765 - AluSc SINE Alu -5 304 114 1906 248 65 43 chr2 171254820 171255590 -82000993 - L1MB8 LINE L1 -1776 4370 3584 1874 305 117 16 chr2 171255604 171256394 -82000189 + L1M4b LINE L1 68 936 -5923 1908 65 37 65 chr2 171256786 171257080 -81999503 - AluY SINE Alu -25 286 1 992 329 35 27 chr2 171257212 171257732 -81998851 - L1ME LINE L1 -5541 529 6 548 265 86 26 chr2 171257832 171258145 -81998438 - L1MEc LINE L1 -3979 2417 2086 233 288 144 8 chr2 171258288 171258406 -81998177 - L1MEc LINE L1 -4582 1814 1681 309 313 10 21 chr2 171258602 171258698 -81997885 + CT-rich Low_complexity Low_complexity 2 96 0 189 154 0 0 chr2 171258716 171258755 -81997828 + CT-rich Low_complexity Low_complexity 2 40 0 942 309 115 3 chr2 171258791 171259462 -81997121 - L1MEc LINE L1 -4815 1581 836 493 288 66 55 chr2 171259543 171259800 -81996783 - L1MEc LINE L1 -6038 358 99 2067 209 55 92 chr2 171259824 171260478 -81996105 - MER21B LTR ERV1 -2 861 232 495 77 0 0 chr2 171260649 171260714 -81995869 - AluY SINE Alu -37 274 210 294 361 39 39 chr2 171260954 171261209 -81995374 + L2 LINE L2 2477 2731 -583 433 323 87 62 chr2 171261702 171261818 -81994765 + L2 LINE L2 2712 2824 -489 2725 7 0 3 chr2 171261818 171262117 -81994466 - AluYa5 SINE Alu -13 298 1 433 323 87 62 chr2 171262117 171262384 -81994199 + L2 LINE L2 2824 3120 -193 1621 182 7 11 chr2 171262384 171262670 -81993913 + AluJb SINE Alu 1 285 -27 433 323 87 62 chr2 171262670 171262870 -81993713 + L2 LINE L2 3120 3313 0 2774 83 88 5 chr2 171263651 171264059 -81992524 - MLT2A1 LTR ERVL -2 442 1 37359 81 6 8 chr2 171264059 171268978 -81987605 - HERVL-A1 LTR ERVL 0 5654 743 700 65 0 0 chr2 171268978 171269070 -81987513 - MLT2A2 LTR ERVL -361 92 1 258 116 0 0 chr2 171269127 171269170 -81987413 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 335 254 116 29 chr2 171269721 171269859 -81986724 - MIR SINE MIR -30 232 83 2135 113 0 0 chr2 171269867 171270179 -81986404 - AluY SINE Alu 0 312 1 243 310 80 44 chr2 171271567 171271680 -81984903 - MIR SINE MIR -143 119 3 22 0 0 0 chr2 171271729 171271751 -81984832 + AT_rich Low_complexity Low_complexity 1 22 0 770 304 27 19 chr2 171272103 171272360 -81984223 + MIR SINE MIR 4 262 0 639 255 143 54 chr2 171273143 171273457 -81983126 - MLT1I LTR MaLR -67 342 1 249 360 0 0 chr2 171274222 171274311 -81982272 + GA-rich Low_complexity Low_complexity 2 90 0 1427 268 159 17 chr2 171275225 171275766 -81980817 - MLT2F LTR ERVL -45 618 1 26 30 0 0 chr2 171277184 171277217 -81979366 + AT_rich Low_complexity Low_complexity 1 33 0 267 54 0 0 chr2 171277498 171277535 -81979048 + (CA)n Simple_repeat Simple_repeat 2 38 0 229 278 65 42 chr2 171277747 171278010 -81978573 - L1MDa LINE L1 -3597 2943 2675 257 246 9 39 chr2 171278023 171278197 -81978386 - L1MDa LINE L1 -3933 2607 2441 30 83 0 0 chr2 171279257 171279329 -81977254 + AT_rich Low_complexity Low_complexity 1 72 0 359 182 13 13 chr2 171280215 171280292 -81976291 - MLT1K LTR MaLR 0 588 512 1802 144 74 0 chr2 171283050 171283334 -81973249 + AluSx SINE Alu 1 305 -7 3072 123 2 0 chr2 171283369 171283834 -81972749 + L1PA14 LINE L1 5695 6160 -1 2641 98 0 11 chr2 171284341 171284709 -81971874 + THE1B LTR MaLR 1 364 0 1333 213 28 31 chr2 171285177 171285468 -81971115 - AluJo SINE Alu -12 290 1 191 226 0 16 chr2 171286274 171286336 -81970247 + GA-rich Low_complexity Low_complexity 3 63 0 448 267 148 51 chr2 171287242 171287459 -81969124 + L2 LINE L2 3076 3313 0 21 0 0 0 chr2 171287898 171287919 -81968664 + AT_rich Low_complexity Low_complexity 1 21 0 5381 180 28 12 chr2 171289133 171291074 -81965509 + L1MB1 LINE L1 4195 6168 0 241 231 0 0 chr2 171293229 171293281 -81963302 + (TG)n Simple_repeat Simple_repeat 1 52 0 2146 129 10 0 chr2 171293310 171293613 -81962970 - AluSx SINE Alu -6 306 1 24 53 0 0 chr2 171293823 171293861 -81962722 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr2 171295780 171295801 -81960782 + AT_rich Low_complexity Low_complexity 1 21 0 214 310 0 0 chr2 171296132 171296203 -81960380 + MIR SINE MIR 183 253 -9 234 0 0 0 chr2 171299542 171299568 -81957015 + (T)n Simple_repeat Simple_repeat 1 26 0 429 227 7 57 chr2 171299870 171300018 -81956565 + MLT1E3 LTR MaLR 56 177 -447 851 173 17 4 chr2 171301274 171301513 -81955070 + GA-rich Low_complexity Low_complexity 1 242 0 243 0 0 0 chr2 171301673 171301700 -81954883 + (T)n Simple_repeat Simple_repeat 1 27 0 1303 231 182 28 chr2 171301968 171302523 -81954060 + MLT1E2 LTR MaLR 2 626 0 203 365 43 30 chr2 171302529 171302759 -81953824 + L2 LINE L2 2492 2724 -590 2123 101 0 0 chr2 171303271 171303547 -81953036 + AluSg SINE Alu 1 276 -34 791 61 30 15 chr2 171303547 171303678 -81952905 + (GAAA)n Simple_repeat Simple_repeat 3 135 0 374 343 4 37 chr2 171303847 171303924 -81952659 + HAL1 LINE L1 818 896 -1611 1721 152 0 7 chr2 171303924 171304193 -81952390 + AluSx SINE Alu 1 267 -45 374 343 4 37 chr2 171304193 171304386 -81952197 + HAL1 LINE L1 896 1079 -1428 * 767 283 125 27 chr2 171304361 171304880 -81951703 + HAL1 LINE L1 1315 1884 -623 790 236 11 0 chr2 171305054 171305232 -81951351 + L1MD3 LINE L1 7800 7979 -16 655 308 4 25 chr2 171306451 171306691 -81949892 + L1MC3 LINE L1 1062 1296 -5842 * 945 227 70 56 chr2 171306676 171307406 -81949177 + L1MC3 LINE L1 2462 3351 -3606 1401 263 49 14 chr2 171307411 171308043 -81948540 + L1MC3 LINE L1 3518 4171 -2786 4039 154 8 1 chr2 171308161 171308815 -81947768 + HERVH LTR ERV1 4492 5149 -2564 1305 131 23 14 chr2 171308812 171309033 -81947550 + HERVH LTR ERV1 5597 5819 -1894 * 2530 69 45 13 chr2 171309033 171309411 -81947172 + HERVH LTR ERV1 7324 7713 0 1385 152 110 65 chr2 171309411 171309840 -81946743 + LTR7 LTR ERV1 1 448 -2 1726 240 98 35 chr2 171309841 171310208 -81946375 + L1MC3 LINE L1 5318 5661 -1296 2277 102 0 7 chr2 171310208 171310513 -81946070 + AluSq SINE Alu 1 303 -10 1726 240 98 35 chr2 171310513 171310933 -81945650 + L1MC3 LINE L1 5661 6154 -803 1487 265 24 0 chr2 171310943 171311279 -81945304 + L1MEc LINE L1 10 353 -6506 1293 173 77 8 chr2 171311282 171311530 -81945053 + L1MEc LINE L1 670 934 -5925 1947 238 96 32 chr2 171311544 171312333 -81944250 + L1MEc LINE L1 994 1832 -5023 1137 195 24 4 chr2 171312323 171312574 -81944009 + L1MEc LINE L1 4468 4723 -2234 * 815 175 25 10 chr2 171312574 171312888 -81943695 + MSTC LTR MaLR 1 428 0 4396 232 46 33 chr2 171312888 171314408 -81942175 + L1MEc LINE L1 4719 6260 -745 1494 217 59 5 chr2 171314382 171314756 -81941827 + L1MB8 LINE L1 6592 6985 -4 * 2840 263 44 18 chr2 171314763 171315702 -81940881 + L1MC3 LINE L1 6139 7101 -1495 3068 214 51 8 chr2 171315706 171316505 -81940078 + L1MD1 LINE L1 4466 5299 -847 305 261 78 20 chr2 171316509 171316662 -81939921 + L1MD1 LINE L1 5757 5931 -311 * 3044 132 25 35 chr2 171316547 171316679 -81939904 + L1MA3 LINE L1 5757 5889 -416 3044 119 18 43 chr2 171316679 171317076 -81939507 + L1MA3 LINE L1 5757 6138 -167 1957 126 0 7 chr2 171317076 171317383 -81939200 + AluSx SINE Alu 1 305 0 3044 119 18 43 chr2 171317383 171317547 -81939036 + L1MA3 LINE L1 6138 6305 0 3044 132 25 35 chr2 171317547 171317566 -81939017 + L1MA3 LINE L1 5889 6305 0 22 35 0 0 chr2 171317627 171317656 -81938927 + AT_rich Low_complexity Low_complexity 1 29 0 32 67 0 0 chr2 171317673 171317733 -81938850 + AT_rich Low_complexity Low_complexity 1 60 0 2133 273 40 28 chr2 171317844 171318763 -81937820 + L1M4 LINE L1 3386 4315 -1831 318 298 43 53 chr2 171319740 171319928 -81936655 + HAL1 LINE L1 2176 2361 -146 22 56 0 0 chr2 171320074 171320110 -81936473 + AT_rich Low_complexity Low_complexity 1 36 0 24 32 0 0 chr2 171321241 171321272 -81935311 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr2 171323576 171323605 -81932978 + AT_rich Low_complexity Low_complexity 1 29 0 387 347 73 0 chr2 171324152 171324302 -81932281 - L2 LINE L2 -13 3300 3140 739 277 56 14 chr2 171325964 171326177 -81930406 + MIR SINE MIR 1 222 -40 221 268 127 0 chr2 171326377 171326448 -81930135 + MIR3 SINE MIR 98 177 -31 333 320 145 17 chr2 171326550 171326755 -81929828 - MIR SINE MIR -2 260 28 24 0 0 0 chr2 171327000 171327024 -81929559 + AT_rich Low_complexity Low_complexity 1 24 0 493 321 38 22 chr2 171328472 171328656 -81927927 + MIR SINE MIR 30 216 -46 1889 107 7 7 chr2 171328656 171328946 -81927637 - L1PA10 LINE L1 -815 5331 5042 * 5683 92 3 39 chr2 171328941 171329378 -81927205 + L1PA10 LINE L1 5347 5741 -427 1657 117 12 24 chr2 171329378 171329626 -81926957 + AluSg SINE Alu 64 308 -2 5683 92 3 39 chr2 171329626 171330036 -81926547 + L1PA10 LINE L1 5741 6164 -4 1128 198 118 33 chr2 171330052 171330418 -81926165 + MLT1E3 LTR MaLR 176 577 -47 773 79 9 0 chr2 171330419 171330533 -81926050 + (GGAA)n Simple_repeat Simple_repeat 1 115 0 218 321 291 0 chr2 171331204 171331338 -81925245 - L2 LINE L2 -6 3266 3094 2320 86 10 0 chr2 171331479 171331783 -81924800 - AluSg SINE Alu -3 307 1 1750 160 10 33 chr2 171332024 171332331 -81924252 + AluJb SINE Alu 1 300 -12 310 310 11 0 chr2 171332734 171332821 -81923762 - L2 LINE L2 0 3313 3226 648 178 42 0 chr2 171332909 171333027 -81923556 - MER63 DNA MER1_type -87 749 1 330 246 209 21 chr2 171333217 171333404 -81923179 - L2 LINE L2 -378 2936 2715 21 0 0 0 chr2 171336080 171336101 -81920482 + AT_rich Low_complexity Low_complexity 1 21 0 317 318 30 30 chr2 171337446 171337578 -81919005 + MIR SINE MIR 8 139 -123 30 83 0 0 chr2 171337578 171337650 -81918933 + AT_rich Low_complexity Low_complexity 1 72 0 436 265 67 59 chr2 171337900 171338045 -81918538 - MLT1K LTR MaLR 0 588 439 2197 92 3 7 chr2 171338045 171338340 -81918243 + AluSp SINE Alu 1 294 -19 436 265 67 59 chr2 171338340 171338432 -81918151 - MLT1K LTR MaLR -149 439 349 1197 241 4 4 chr2 171338465 171338714 -81917869 + MER58 DNA MER1_type 1 249 -92 335 271 67 75 chr2 171338715 171339091 -81917492 + L1ME4a LINE L1 5524 5896 -225 687 312 126 39 chr2 171340742 171341429 -81915154 - L2 LINE L2 -3 3310 2575 2047 111 91 24 chr2 171341463 171341804 -81914779 - THE1B LTR MaLR 0 364 1 11640 101 4 1 chr2 171341809 171343378 -81913205 - THE1B-int LTR MaLR -6 1574 1 2062 120 88 20 chr2 171343378 171343719 -81912864 - THE1B LTR MaLR 0 364 1 1719 319 46 12 chr2 171343719 171344367 -81912216 - L2 LINE L2 -768 2546 1877 429 95 0 0 chr2 171344651 171344714 -81911869 + (CA)n Simple_repeat Simple_repeat 2 64 0 23 33 0 0 chr2 171344834 171344864 -81911719 + AT_rich Low_complexity Low_complexity 1 30 0 27 49 0 0 chr2 171346105 171346146 -81910437 + AT_rich Low_complexity Low_complexity 1 41 0 590 171 8 0 chr2 171346738 171346861 -81909722 + CT-rich Low_complexity Low_complexity 1 124 0 1612 181 0 44 chr2 171346861 171347181 -81909402 - AluJb SINE Alu -6 306 1 920 254 10 5 chr2 171349117 171349314 -81907269 - MER58A DNA MER1_type -1 223 26 1758 210 43 43 chr2 171349527 171349988 -81906595 + MLT1C LTR MaLR 7 467 0 1498 213 56 48 chr2 171350067 171350551 -81906032 - Charlie4a DNA MER1_type -19 489 2 29 0 0 0 chr2 171350935 171350964 -81905619 + AT_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr2 171351236 171351278 -81905305 + AT_rich Low_complexity Low_complexity 1 42 0 1976 127 45 10 chr2 171351959 171352273 -81904310 - MER7A DNA MER2_type -20 326 4 222 290 145 32 chr2 171352726 171352850 -81903733 - L2 LINE L2 -1 3312 3175 182 302 127 16 chr2 171357891 171358017 -81898566 + L2 LINE L2 1762 1901 -1413 228 135 0 0 chr2 171358397 171358434 -81898149 + (TA)n Simple_repeat Simple_repeat 2 38 0 445 287 97 43 chr2 171360037 171360244 -81896339 + L1ME2 LINE L1 2261 2455 -3691 2398 92 0 0 chr2 171360244 171360550 -81896033 + AluSc SINE Alu 1 306 -3 445 287 97 43 chr2 171360550 171361176 -81895407 + L1ME2 LINE L1 2455 3139 -3007 1330 165 27 0 chr2 171361230 171361454 -81895129 + AluSg/x SINE Alu 71 300 -12 292 259 109 38 chr2 171361493 171361914 -81894669 + L1ME2 LINE L1 3164 3614 -2532 1259 216 63 116 chr2 171362208 171362778 -81893805 - MLT1F LTR MaLR 0 542 3 7009 68 239 8 chr2 171362931 171364036 -81892547 + L1P LINE L1 1 1360 -4786 876 172 13 0 chr2 171364151 171364389 -81892194 + GA-rich Low_complexity Low_complexity 1 241 0 206 241 17 17 chr2 171364969 171365027 -81891556 + MIR SINE MIR 132 189 -73 460 323 137 33 chr2 171366968 171367332 -81889251 + L1MEd LINE L1 589 914 -1576 1771 149 61 30 chr2 171367332 171367694 -81888889 - THE1C LTR MaLR -2 373 1 460 323 137 33 chr2 171367694 171367711 -81888872 + L1MEd LINE L1 914 928 -1562 19651 96 3 0 chr2 171367711 171371355 -81885228 + L1PA7 LINE L1 2501 6153 -1 460 323 137 33 chr2 171371355 171371672 -81884911 + L1MEd LINE L1 928 1441 -1049 2661 178 27 37 chr2 171371766 171372282 -81884301 - MER68 LTR ERV1 -51 511 1 312 343 62 19 chr2 171372414 171372624 -81883959 + L2 LINE L2 2130 2348 -966 716 261 32 18 chr2 171372716 171372996 -81883587 + L1ME2 LINE L1 4229 4512 -1634 1279 185 97 62 chr2 171372996 171373429 -81883154 + LTR7 LTR ERV1 1 448 -2 20070 99 13 14 chr2 171373431 171376421 -81880162 + HERVH LTR ERV1 1 2987 -4726 949 127 7 0 chr2 171376415 171376565 -81880018 + HERVH LTR ERV1 3140 3290 -4423 * 2709 122 16 7 chr2 171376555 171376996 -81879587 + HERVH LTR ERV1 3492 3936 -3777 33729 31 1 2 chr2 171377102 171381941 -81874642 + L1PA4 LINE L1 1304 6141 -14 1154 142 9 47 chr2 171381941 171382153 -81874430 + THE1B LTR MaLR 159 362 -2 11029 109 5 9 chr2 171382155 171383741 -81872842 + THE1B-int LTR MaLR 1 1580 0 2446 100 11 30 chr2 171383741 171384112 -81872471 + THE1B LTR MaLR 1 364 0 5515 172 11 20 chr2 171384284 171386057 -81870526 - L1PA16 LINE L1 0 6166 4410 1945 270 71 22 chr2 171386051 171386989 -81869594 + L1ME2 LINE L1 5178 6161 -3 * 22 0 0 0 chr2 171388615 171388637 -81867946 + AT_rich Low_complexity Low_complexity 1 22 0 227 53 0 53 chr2 171389255 171389293 -81867290 + (TTTTTG)n Simple_repeat Simple_repeat 1 36 0 329 296 170 35 chr2 171389432 171389662 -81866921 - HAL1 LINE L1 -27 2480 2220 1268 271 134 63 chr2 171389719 171390654 -81865929 - HAL1 LINE L1 -301 2206 1206 767 326 92 3 chr2 171390679 171390983 -81865600 - HAL1 LINE L1 -1604 903 573 265 250 91 15 chr2 171391106 171391238 -81865345 + L1ME LINE L1 5597 5738 -383 355 216 12 17 chr2 171391425 171391602 -81864981 + GA-rich Low_complexity Low_complexity 1 176 0 22 0 0 0 chr2 171392379 171392401 -81864182 + AT_rich Low_complexity Low_complexity 1 22 0 2315 168 10 27 chr2 171392652 171393139 -81863444 - L1MA6 LINE L1 -5 6295 5817 13240 189 36 22 chr2 171393242 171394382 -81862201 - L1MA6 LINE L1 -726 5574 4452 225 0 0 0 chr2 171394382 171394407 -81862176 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2174 86 0 0 chr2 171394408 171394687 -81861896 - AluY SINE Alu -32 279 1 13240 189 36 22 chr2 171394687 171396891 -81859692 - L1MA6 LINE L1 -1847 4453 2183 245 139 0 0 chr2 171396891 171396934 -81859649 - L1 LINE L1 -3816 2330 2288 * 1161 211 11 3 chr2 171396930 171397215 -81859368 - L1 LINE L1 -3011 4554 4268 543 216 12 64 chr2 171397225 171397396 -81859187 - L1 LINE L1 -3802 3763 3602 * 1042 224 15 72 chr2 171397395 171397552 -81859031 - L1 LINE L1 -3815 3750 3586 2172 98 0 57 chr2 171397552 171397870 -81858713 - AluSq SINE Alu -13 300 1 1042 224 15 72 chr2 171397870 171398168 -81858415 - L1 LINE L1 -3979 3586 3313 235 316 18 9 chr2 171398302 171398416 -81858167 + L1ME4a LINE L1 4187 4301 -1845 910 245 94 24 chr2 171398439 171398811 -81857772 - L1M4 LINE L1 -985 5161 4764 26 101 0 0 chr2 171398870 171398959 -81857624 + AT_rich Low_complexity Low_complexity 1 89 0 342 251 40 91 chr2 171399190 171399389 -81857194 + L1ME4a LINE L1 5676 5864 -257 1718 177 93 3 chr2 171399421 171399777 -81856806 + L1MC1 LINE L1 5946 6333 0 388 284 35 0 chr2 171399983 171400099 -81856484 - Zaphod DNA AcHobo -3860 171 52 1913 209 14 69 chr2 171400173 171400681 -81855902 - MLT1D LTR MaLR -22 483 4 2551 148 52 70 chr2 171400682 171401255 -81855328 - MER34B LTR ERV1 -2 563 1 806 337 8 35 chr2 171401262 171401636 -81854947 - MLT1I LTR MaLR -6 403 40 508 334 136 56 chr2 171401685 171402059 -81854524 + L1MEd LINE L1 59 462 -5657 380 375 102 3 chr2 171402082 171402407 -81854176 - L1 LINE L1 -3595 2551 2195 269 193 181 48 chr2 171402448 171402664 -81853919 + L1MC/D LINE L1 5176 5422 -742 267 223 108 45 chr2 171402744 171402927 -81853656 + L1MC/D LINE L1 5628 5814 -320 22 56 0 0 chr2 171403068 171403104 -81853479 + AT_rich Low_complexity Low_complexity 1 36 0 33 25 0 0 chr2 171403315 171403355 -81853228 + AT_rich Low_complexity Low_complexity 1 40 0 237 267 47 23 chr2 171404114 171404200 -81852383 + L2 LINE L2 3216 3303 -10 348 236 30 79 chr2 171405829 171405994 -81850589 + MER103 DNA DNA 3 159 -7 183 80 0 0 chr2 171406010 171406035 -81850548 + (TG)n Simple_repeat Simple_repeat 2 26 0 21 82 0 0 chr2 171406570 171406619 -81849964 + AT_rich Low_complexity Low_complexity 1 49 0 262 355 136 0 chr2 171407716 171407885 -81848698 + MIR SINE MIR 68 259 -3 428 327 97 35 chr2 171408393 171408535 -81848048 + MIR SINE MIR 15 178 -84 195 69 0 0 chr2 171408535 171408564 -81848019 + (TG)n Simple_repeat Simple_repeat 2 30 0 428 327 97 35 chr2 171408564 171408647 -81847936 + MIR SINE MIR 178 254 -8 227 280 0 0 chr2 171408663 171408713 -81847870 - MIR SINE MIR -162 100 51 5082 183 83 88 chr2 171409054 171409634 -81846949 - L1MC3 LINE L1 -9 7776 7195 284 274 36 12 chr2 171409634 171409718 -81846865 - MLT1F1 LTR MaLR -437 130 45 5082 183 83 88 chr2 171409718 171410485 -81846098 - L1MC3 LINE L1 -590 7195 6353 2104 137 32 0 chr2 171410482 171410855 -81845728 - L1M4c LINE L1 -4993 1391 1007 * 463 137 20 20 chr2 171410836 171410858 -81845725 - L1P5 LINE L1 -475 5681 5660 * 2226 143 69 2 chr2 171410858 171411264 -81845319 - L1PB4 LINE L1 0 6156 5724 463 137 20 20 chr2 171411264 171411343 -81845240 - L1P5 LINE L1 -495 5661 5580 329 289 72 7 chr2 171411669 171411821 -81844762 + HAL1 LINE L1 2061 2222 -285 192 182 0 0 chr2 171411848 171411892 -81844691 + (TATG)n Simple_repeat Simple_repeat 2 45 0 399 249 36 18 chr2 171411895 171412060 -81844523 + HAL1 LINE L1 2231 2398 -109 972 258 50 74 chr2 171412849 171412954 -81843629 - L1M4 LINE L1 -1394 4752 4646 1474 172 7 36 chr2 171412954 171413256 -81843327 - AluJo SINE Alu -19 293 1 972 258 50 74 chr2 171413256 171413536 -81843047 - L1M4 LINE L1 -1500 4646 4361 300 70 0 0 chr2 171413536 171413579 -81843004 + (TG)n Simple_repeat Simple_repeat 2 44 0 565 213 56 0 chr2 171413581 171413689 -81842894 - FLAM_C SINE Alu -18 115 2 972 258 50 74 chr2 171413689 171413978 -81842605 - L1M4 LINE L1 -1786 4360 4090 626 206 52 0 chr2 171413978 171414114 -81842469 - AluJb SINE Alu -4 308 166 454 252 112 0 chr2 171414427 171414570 -81842013 + MER3 DNA MER1_type 45 203 -6 389 291 59 44 chr2 171414675 171414878 -81841705 + MER46C DNA MER2_type 67 272 -66 236 279 9 18 chr2 171414881 171414992 -81841591 + (TA)n Simple_repeat Simple_repeat 1 110 0 5419 189 32 28 chr2 171414996 171416538 -81840045 - L1P5 LINE L1 -568 6291 4742 3568 258 55 18 chr2 171416560 171417981 -81838602 - L1P5 LINE L1 -3491 3358 1900 1249 85 18 0 chr2 171418012 171418177 -81838406 - AluY SINE Alu -11 300 133 2423 52 13 20 chr2 171418177 171418482 -81838101 - AluY SINE Alu -8 303 1 5992 258 24 73 chr2 171418500 171420479 -81836104 - L1P5 LINE L1 -4965 1884 2 5332 167 24 26 chr2 171420479 171421496 -81835087 - L1M4c LINE L1 -5352 1032 18 4322 250 97 55 chr2 171421520 171425260 -81831323 - L1MCa LINE L1 -1886 4678 783 314 299 32 19 chr2 171425330 171425487 -81831096 - L1MCa LINE L1 -5480 565 407 2102 285 30 29 chr2 171425490 171426216 -81830367 - L1MCb LINE L1 -5316 729 3 275 271 111 28 chr2 171426325 171426469 -81830114 - L2 LINE L2 -167 3146 2991 662 368 69 26 chr2 171426538 171427114 -81829469 - L2 LINE L2 -433 2881 2281 1781 155 35 58 chr2 171429203 171429602 -81826981 + MLT1B LTR MaLR 1 390 0 33 56 0 0 chr2 171430077 171430131 -81826452 + AT_rich Low_complexity Low_complexity 1 54 0 315 276 13 0 chr2 171430784 171430860 -81825723 + CT-rich Low_complexity Low_complexity 1 77 0 321 264 107 16 chr2 171431121 171431242 -81825341 - MIR SINE MIR -108 154 23 474 303 57 57 chr2 171431510 171432322 -81824261 - L1MDa LINE L1 -2961 3579 2768 326 278 19 78 chr2 171432502 171432707 -81823876 - L1MDa LINE L1 -3980 2560 2368 342 334 30 41 chr2 171433096 171433458 -81823125 - HAL1 LINE L1 -865 1642 1285 838 300 88 45 chr2 171434297 171434825 -81821758 + HAL1b LINE L1 88 651 -697 2342 74 3 3 chr2 171434825 171435136 -81821447 - AluY SINE Alu 0 311 1 838 300 88 45 chr2 171435136 171435254 -81821329 + HAL1b LINE L1 651 762 -586 343 345 34 26 chr2 171435403 171435667 -81820916 + MLT1L LTR MaLR 1 266 -349 198 0 0 0 chr2 171435682 171435704 -81820879 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 3443 180 52 69 chr2 171435707 171436637 -81819946 - L1MB7 LINE L1 -9 6175 5263 3133 108 30 16 chr2 171436642 171437133 -81819450 - L1PA14 LINE L1 -9 6152 5655 354 24 0 0 chr2 171437133 171437174 -81819409 - MLT2A2 LTR ERVL 0 453 413 198 0 0 0 chr2 171437175 171437197 -81819386 + (TA)n Simple_repeat Simple_repeat 2 23 0 270 81 0 0 chr2 171437239 171437276 -81819307 - HERVL LTR ERVL -2565 3089 3053 25 0 0 0 chr2 171437301 171437326 -81819257 + AT_rich Low_complexity Low_complexity 1 25 0 22 99 0 0 chr2 171437357 171437428 -81819155 + AT_rich Low_complexity Low_complexity 1 71 0 951 118 40 7 chr2 171437446 171437598 -81818985 - MLT2A2 LTR ERVL -50 403 247 10984 134 18 28 chr2 171437609 171439451 -81817132 - L1PA12 LINE L1 -4463 3121 1296 326 266 62 9 chr2 171439454 171439567 -81817016 + L1ME4a LINE L1 4932 5050 -1096 1917 148 19 40 chr2 171439608 171439980 -81816603 - THE1B LTR MaLR 0 364 1 281 67 0 22 chr2 171440130 171440175 -81816408 + (TA)n Simple_repeat Simple_repeat 1 44 0 317 304 20 54 chr2 171440451 171440599 -81815984 + MIR SINE MIR 49 191 -71 22 0 0 0 chr2 171440716 171440738 -81815845 + AT_rich Low_complexity Low_complexity 1 22 0 1283 221 41 39 chr2 171442516 171442905 -81813678 - MLT1B LTR MaLR 0 390 1 239 167 21 0 chr2 171443252 171443300 -81813283 + (CA)n Simple_repeat Simple_repeat 2 50 0 230 307 68 55 chr2 171443353 171443516 -81813067 - L2 LINE L2 -505 2809 2645 180 0 0 0 chr2 171443828 171443848 -81812735 + (TA)n Simple_repeat Simple_repeat 2 21 0 1951 109 4 4 chr2 171443851 171444117 -81812466 - AluSg SINE Alu -19 291 26 262 351 98 25 chr2 171444252 171444497 -81812086 + L3 LINE CR1 996 1258 -319 183 254 111 0 chr2 171445250 171445313 -81811270 + L2 LINE L2 3202 3271 -1 2038 121 3 3 chr2 171445881 171446170 -81810413 - AluSx SINE Alu -23 289 1 189 333 0 0 chr2 171446943 171446988 -81809595 + L2 LINE L2 2999 3043 -229 542 242 134 6 chr2 171447493 171447650 -81808933 + MIR3 SINE MIR 19 195 -13 23 54 0 0 chr2 171448502 171448539 -81808044 + AT_rich Low_complexity Low_complexity 1 37 0 206 351 185 9 chr2 171448548 171448759 -81807824 + L3 LINE CR1 1264 1511 -66 211 200 0 22 chr2 171449506 171449551 -81807032 + CT-rich Low_complexity Low_complexity 4 47 0 738 217 118 0 chr2 171450317 171450478 -81806105 + MER5A DNA MER1_type 1 180 -9 460 288 144 11 chr2 171451038 171451316 -81805267 + L1ME4a LINE L1 5382 5696 -425 478 259 12 12 chr2 171451342 171451508 -81805075 + L1ME4a LINE L1 5743 5908 -213 623 40 0 0 chr2 171451563 171451638 -81804945 - L1PA4 LINE L1 -344 5811 5737 2845 50 33 0 chr2 171451638 171451999 -81804584 + L1PA4 LINE L1 5779 6153 -2 397 332 124 10 chr2 171452092 171452285 -81804298 + L2 LINE L2 2762 2976 -338 342 287 33 113 chr2 171452510 171452759 -81803824 - MER41B LTR ERV1 -202 433 53 241 279 176 62 chr2 171452918 171453190 -81803393 + L2 LINE L2 2986 3288 -25 390 244 17 43 chr2 171453759 171453874 -81802709 + MER77 LTR ERV1 85 196 -409 * 1328 274 71 45 chr2 171453846 171454453 -81802130 + MER21B LTR ERV1 96 718 -145 458 291 75 91 chr2 171455792 171456057 -81800526 - MIR SINE MIR 0 262 2 211 178 55 14 chr2 171456355 171456428 -81800155 + (TA)n Simple_repeat Simple_repeat 2 77 0 565 267 49 12 chr2 171456428 171456675 -81799908 - Tigger8 DNA MER2_type -149 517 262 2255 125 0 0 chr2 171456699 171457004 -81799579 - AluSq SINE Alu -8 305 1 2907 152 20 48 chr2 171457830 171458031 -81798552 - L1PB4 LINE L1 -8 6148 5638 2344 113 0 0 chr2 171458031 171458341 -81798242 - AluSx SINE Alu -2 310 1 2762 184 14 97 chr2 171458341 171459114 -81797469 - L1MA8 LINE L1 -323 5968 5260 23 0 0 0 chr2 171461074 171461097 -81795486 + AT_rich Low_complexity Low_complexity 1 23 0 2432 113 10 51 chr2 171461233 171461600 -81794983 + THE1C LTR MaLR 1 353 -22 1811 128 70 56 chr2 171461600 171461959 -81794624 - THE1B LTR MaLR 0 364 1 2432 113 10 51 chr2 171461959 171461982 -81794601 + THE1C LTR MaLR 353 375 0 8874 135 69 14 chr2 171461982 171462295 -81794288 + THE1C-int LTR MaLR 1 295 -1285 2029 153 0 0 chr2 171462295 171462589 -81793994 - AluSx SINE Alu -18 294 1 8874 135 69 14 chr2 171462589 171463773 -81792810 + THE1C-int LTR MaLR 295 1580 0 2346 121 27 16 chr2 171463773 171464144 -81792439 + THE1C LTR MaLR 1 375 0 22 0 0 0 chr2 171464610 171464632 -81791951 + AT_rich Low_complexity Low_complexity 1 22 0 190 314 119 34 chr2 171464674 171464792 -81791791 + MIR SINE MIR 99 226 -36 868 304 12 8 chr2 171464795 171465045 -81791538 - MIR SINE MIR -10 252 2 284 206 16 0 chr2 171465263 171465326 -81791257 + L1 LINE L1 2555 2618 -4231 1544 276 14 20 chr2 171465473 171466023 -81790560 + L1 LINE L1 2836 3382 -3466 * 3070 203 21 24 chr2 171466020 171466769 -81789814 + L1 LINE L1 4741 5487 -1361 1696 66 0 82 chr2 171467031 171467288 -81789295 - AluY SINE Alu 0 311 76 346 246 232 21 chr2 171468902 171469044 -81787539 - MER5A DNA MER1_type 0 189 18 198 237 153 17 chr2 171469846 171469905 -81786678 + L3b LINE CR1 1504 1570 -13 23 0 0 0 chr2 171470321 171470344 -81786239 + AT_rich Low_complexity Low_complexity 1 23 0 189 290 97 32 chr2 171470831 171470924 -81785659 + L2 LINE L2 3215 3313 0 324 0 0 0 chr2 171472275 171472311 -81784272 + (TG)n Simple_repeat Simple_repeat 1 36 0 2051 125 0 14 chr2 171472897 171473194 -81783389 + AluSq SINE Alu 1 293 -20 414 299 138 22 chr2 171474143 171474367 -81782216 - MIR SINE MIR -12 250 1 838 271 54 19 chr2 171475812 171476129 -81780454 - L1M4 LINE L1 -1847 4299 3972 478 175 35 0 chr2 171476123 171476237 -81780346 + L1M4 LINE L1 4321 4438 -1708 * 1712 149 102 18 chr2 171476237 171476572 -81780011 + L1PB4 LINE L1 5794 6156 0 298 369 49 0 chr2 171476755 171476877 -81779706 + L2 LINE L2 3145 3272 0 185 289 23 62 chr2 171477289 171477417 -81779166 - MIR SINE MIR -42 220 98 191 358 98 16 chr2 171477471 171477594 -81778989 + MIR SINE MIR 20 152 -110 1128 198 18 9 chr2 171479933 171480155 -81776428 + AluJo SINE Alu 78 301 -11 245 98 24 0 chr2 171481704 171481745 -81774838 + (TCTCC)n Simple_repeat Simple_repeat 1 42 0 216 226 19 38 chr2 171482612 171482665 -81773918 + MIR SINE MIR 211 262 0 21 0 0 0 chr2 171483041 171483062 -81773521 + AT_rich Low_complexity Low_complexity 1 21 0 1146 274 69 33 chr2 171483461 171483984 -81772599 + MLT1G LTR MaLR 1 503 -87 35 54 0 0 chr2 171484197 171484253 -81772330 + AT_rich Low_complexity Low_complexity 1 56 0 731 261 66 30 chr2 171484806 171485170 -81771413 - L1M4 LINE L1 -2181 3965 3589 399 344 118 14 chr2 171485308 171485782 -81770801 - L1M4 LINE L1 -2713 3433 2906 2031 101 7 7 chr2 171486515 171486844 -81769739 - AluSx SINE Alu 0 363 35 530 298 36 23 chr2 171486993 171487295 -81769288 - HAL1b LINE L1 -734 614 309 2499 61 0 3 chr2 171488657 171488969 -81767614 + AluY SINE Alu 1 311 0 280 322 112 0 chr2 171490426 171490569 -81766014 - MIR SINE MIR -98 164 6 1010 225 83 17 chr2 171492849 171493200 -81763383 - L1M4 LINE L1 -1286 4860 4487 7222 134 15 5 chr2 171493299 171493798 -81762785 + L1MA1 LINE L1 4675 5167 -1135 1702 175 11 3 chr2 171493798 171494084 -81762499 + AluSx SINE Alu 1 288 -24 7222 134 15 5 chr2 171494084 171495194 -81761389 + L1MA1 LINE L1 5167 6302 0 819 207 12 122 chr2 171495215 171495506 -81761077 + MLT1H1 LTR MaLR 289 536 -6 473 260 127 78 chr2 171496565 171496873 -81759710 + MLT1A1-int LTR MaLR 1034 1707 -28 9732 190 51 62 chr2 171496914 171498327 -81758256 + L1MC3 LINE L1 4407 5833 -1952 1659 224 25 6 chr2 171498327 171498685 -81757898 + MLT1A1 LTR MaLR 1 365 0 9732 190 51 62 chr2 171498685 171500683 -81755900 + L1MC3 LINE L1 5833 7778 -7 1990 116 7 0 chr2 171500683 171500967 -81755616 + AluY SINE Alu 1 286 -25 30 0 0 0 chr2 171500967 171500997 -81755586 + AT_rich Low_complexity Low_complexity 1 30 0 1053 240 26 60 chr2 171501006 171501356 -81755227 + L1ME1 LINE L1 4695 5032 -1114 361 344 32 60 chr2 171501722 171502004 -81754579 - L2 LINE L2 -1321 1993 1720 1475 263 82 8 chr2 171502269 171502755 -81753828 + L1ME1 LINE L1 5639 6160 -6 198 369 0 24 chr2 171502788 171502872 -81753711 - L2 LINE L2 -3154 160 79 26 0 0 0 chr2 171503409 171503435 -81753148 + AT_rich Low_complexity Low_complexity 1 26 0 1847 152 24 27 chr2 171505597 171505973 -81750610 - THE1C LTR MaLR 0 375 1 9637 123 56 6 chr2 171505973 171507478 -81749105 - THE1C-int LTR MaLR 0 1580 1 1873 144 41 35 chr2 171507478 171507846 -81748737 - THE1C LTR MaLR 0 375 6 1151 283 87 15 chr2 171507857 171508327 -81748256 + Charlie7 DNA MER1_type 67 570 -2042 274 235 126 53 chr2 171508375 171508622 -81747961 + Charlie7 DNA MER1_type 2347 2611 -1 26 30 0 0 chr2 171508697 171508730 -81747853 + AT_rich Low_complexity Low_complexity 1 33 0 212 359 122 0 chr2 171508740 171508896 -81747687 + L3 LINE CR1 320 494 -1083 1012 294 174 24 chr2 171508948 171509488 -81747095 + L2 LINE L2 884 1504 -1810 634 239 18 18 chr2 171509534 171509697 -81746886 - LTR40b LTR ERVL 0 462 300 1147 198 83 68 chr2 171509710 171510085 -81746498 + MLT2D LTR ERVL 1 479 -41 1290 258 25 34 chr2 171510158 171510515 -81746068 - LTR40a LTR ERVL -164 355 2 197 160 0 60 chr2 171510517 171510567 -81746016 + L2 LINE L2 1538 1584 -1730 241 195 0 0 chr2 171510577 171510618 -81745965 + L2 LINE L2 2661 2701 -613 3451 279 82 49 chr2 171510624 171510962 -81745621 + L2 LINE L2 1561 1886 -1427 1902 180 11 16 chr2 171510962 171511329 -81745254 - MLT1A1 LTR MaLR 0 365 1 3451 279 82 49 chr2 171511329 171512680 -81743903 + L2 LINE L2 1886 3300 -13 289 290 99 27 chr2 171512681 171512902 -81743681 + L1MC1 LINE L1 5761 5997 -336 * 2318 154 58 41 chr2 171512718 171512978 -81743605 + L1MA10 LINE L1 5812 6066 -268 1915 119 54 48 chr2 171512978 171513313 -81743270 - MER1B DNA MER1_type 0 337 1 2318 154 58 41 chr2 171513313 171513567 -81743016 + L1MA10 LINE L1 6066 6334 0 185 269 32 21 chr2 171513611 171513704 -81742879 + L2 LINE L2 2890 2983 -289 322 348 14 7 chr2 171514094 171514235 -81742348 + L3 LINE CR1 1418 1559 -18 23 0 0 0 chr2 171515122 171515145 -81741438 + AT_rich Low_complexity Low_complexity 1 23 0 516 123 0 0 chr2 171515893 171515966 -81740617 + MADE1 DNA Mariner 8 80 0 27 29 0 0 chr2 171515969 171516003 -81740580 + AT_rich Low_complexity Low_complexity 1 34 0 267 152 0 0 chr2 171516020 171516066 -81740517 + (TA)n Simple_repeat Simple_repeat 2 47 0 233 209 0 0 chr2 171516692 171516735 -81739848 + GA-rich Low_complexity Low_complexity 2 44 0 246 160 0 0 chr2 171516925 171516975 -81739608 + (TA)n Simple_repeat Simple_repeat 1 50 0 26 30 0 0 chr2 171516995 171517028 -81739555 + AT_rich Low_complexity Low_complexity 1 33 0 290 109 36 0 chr2 171517519 171517574 -81739009 + CT-rich Low_complexity Low_complexity 3 59 0 321 257 124 29 chr2 171525887 171525992 -81730591 - L2 LINE L2 -1 3271 3157 48 72 0 0 chr2 171527656 171527753 -81728830 + AT_rich Low_complexity Low_complexity 1 97 0 21 0 0 0 chr2 171528999 171529020 -81727563 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 171530082 171530103 -81726480 + AT_rich Low_complexity Low_complexity 1 21 0 2249 123 47 3 chr2 171530982 171531341 -81725242 + THE1C LTR MaLR 1 375 0 22 35 0 0 chr2 171532064 171532093 -81724490 + AT_rich Low_complexity Low_complexity 1 29 0 181 279 15 118 chr2 171533761 171533817 -81722766 + L2 LINE L2 3191 3251 -62 234 0 0 0 chr2 171533817 171533843 -81722740 + (TAG)n Simple_repeat Simple_repeat 1 26 0 181 279 15 118 chr2 171533843 171533922 -81722661 + L2 LINE L2 3251 3312 -1 366 215 99 37 chr2 171534742 171534893 -81721690 - MIR SINE MIR -56 206 44 190 250 66 13 chr2 171534901 171534977 -81721606 - L2 LINE L2 -86 3227 3148 321 398 88 43 chr2 171535148 171535372 -81721211 - L2 LINE L2 -450 2864 2652 354 203 13 0 chr2 171535372 171535451 -81721132 + MER116 DNA Mariner 1 80 0 321 398 88 43 chr2 171535451 171535691 -81720892 - L2 LINE L2 -662 2652 2379 349 258 41 10 chr2 171537006 171537103 -81719480 - MIR SINE MIR -97 165 66 2033 116 7 0 chr2 171537321 171537606 -81718977 - AluSc SINE Alu -19 290 4 387 0 0 0 chr2 171538452 171538495 -81718088 + (TA)n Simple_repeat Simple_repeat 2 44 0 725 306 39 20 chr2 171539472 171539570 -81717013 - MIR SINE MIR 0 262 167 799 183 12 108 chr2 171539570 171539811 -81716772 + MER20 DNA MER1_type 2 219 0 725 306 39 20 chr2 171539811 171539967 -81716616 - MIR SINE MIR -95 167 3 2506 61 0 3 chr2 171541059 171541370 -81715213 + AluY SINE Alu 1 310 -1 209 184 0 0 chr2 171542095 171542133 -81714450 + (CA)n Simple_repeat Simple_repeat 2 39 0 2291 59 0 0 chr2 171543232 171543504 -81713079 + AluSc SINE Alu 29 300 -9 430 174 153 0 chr2 171544630 171544728 -81711855 - MER105 DNA DNA -64 140 28 1078 270 156 35 chr2 171545307 171545892 -81710691 + L2 LINE L2 2398 3049 -264 601 318 52 6 chr2 171546357 171546530 -81710053 - MIR3 SINE MIR -16 192 12 232 261 0 0 chr2 171546928 171546993 -81709590 + (TA)n Simple_repeat Simple_repeat 1 65 0 1696 184 3 7 chr2 171547626 171547930 -81708653 + AluJo SINE Alu 1 303 -9 273 255 48 48 chr2 171549719 171549864 -81706719 - MER117 DNA MER1_type -50 147 3 22 35 0 0 chr2 171550360 171550389 -81706194 + AT_rich Low_complexity Low_complexity 1 29 0 663 89 0 20 chr2 171550936 171551037 -81705546 - MIR3 SINE MIR -1 207 109 204 40 0 0 chr2 171551092 171551117 -81705466 + (T)n Simple_repeat Simple_repeat 1 25 0 3222 52 0 70 chr2 171551520 171552002 -81704581 + LTR7 LTR ERV1 1 448 -2 19427 95 45 8 chr2 171552004 171554892 -81701691 + HERVH LTR ERV1 1 2995 -4718 974 120 7 0 chr2 171554871 171555021 -81701562 + HERVH LTR ERV1 3140 3290 -4423 * 3374 120 0 6 chr2 171555011 171555518 -81701065 + HERVH LTR ERV1 3492 3995 -3718 989 71 0 0 chr2 171555518 171555645 -81700938 + HERVH LTR ERV1 4488 4614 -3099 582 249 106 5 chr2 171555645 171555834 -81700749 - L1ME LINE L1 -654 5512 5305 361 325 80 43 chr2 171556197 171556385 -81700198 + MER91A DNA MER1_type 2 196 0 836 207 50 15 chr2 171557232 171557430 -81699153 - MLT1A1 LTR MaLR 0 365 161 306 252 87 17 chr2 171557446 171557561 -81699022 - MLT1A1 LTR MaLR -171 194 72 2794 66 11 0 chr2 171557598 171557963 -81698620 - L1PA13 LINE L1 -30 6133 5765 408 161 62 0 chr2 171557963 171558044 -81698539 - MLT1A1 LTR MaLR -279 86 1 355 285 108 49 chr2 171558067 171558415 -81698168 + L2 LINE L2 2690 3051 -221 2532 72 0 3 chr2 171558597 171558904 -81697679 - AluSq SINE Alu -7 306 1 362 317 102 59 chr2 171559225 171559432 -81697151 - L2 LINE L2 -100 3213 3016 1795 156 17 3 chr2 171559432 171559720 -81696863 + AluSq SINE Alu 3 294 -19 362 317 102 59 chr2 171559720 171560045 -81696538 - L2 LINE L2 -297 3016 2664 672 241 35 30 chr2 171561074 171561273 -81695310 - MIR SINE MIR -61 201 2 555 335 87 0 chr2 171561447 171561677 -81694906 + MIR SINE MIR 2 251 -11 180 0 0 0 chr2 171563010 171563030 -81693553 + (T)n Simple_repeat Simple_repeat 1 20 0 504 299 25 14 chr2 171563270 171563548 -81693035 + L1ME LINE L1 4573 4853 -1293 207 0 0 0 chr2 171563628 171563651 -81692932 + (TAA)n Simple_repeat Simple_repeat 2 24 0 2399 81 0 10 chr2 171563717 171564024 -81692559 + AluY SINE Alu 1 304 -7 374 264 104 49 chr2 171564097 171564571 -81692012 + L1ME LINE L1 5149 5647 -520 198 0 0 0 chr2 171564751 171564773 -81691810 + (CA)n Simple_repeat Simple_repeat 1 22 0 21 0 0 0 chr2 171565067 171565088 -81691495 + AT_rich Low_complexity Low_complexity 1 21 0 257 266 87 75 chr2 171565637 171565810 -81690773 - MLT1I LTR MaLR -2 407 233 233 186 34 0 chr2 171567964 171568023 -81688560 + (CATATA)n Simple_repeat Simple_repeat 2 62 0 353 390 48 0 chr2 171568282 171568428 -81688155 + L2 LINE L2 3116 3268 -4 251 219 42 16 chr2 171569320 171569400 -81687183 - MIR SINE MIR -78 130 43 640 72 50 7 chr2 171569535 171569674 -81686909 + (TAGA)n Simple_repeat Simple_repeat 1 145 0 274 333 128 7 chr2 171570564 171570705 -81685878 + MIR SINE MIR 102 259 -3 258 307 139 10 chr2 171572089 171572190 -81684393 + MER5A DNA MER1_type 3 116 -73 325 228 8 110 chr2 171572506 171572633 -81683950 + L1ME4a LINE L1 5997 6110 -11 305 82 20 0 chr2 171572735 171572784 -81683799 + (CAT)n Simple_repeat Simple_repeat 3 52 0 393 323 98 51 chr2 171574066 171574382 -81682201 + L2 LINE L2 2646 2976 -338 2187 112 13 0 chr2 171574745 171575049 -81681534 + AluSg SINE Alu 3 310 0 253 227 92 30 chr2 171575228 171575364 -81681219 - L1P5 LINE L1 -722 5434 5292 2168 87 102 15 chr2 171575497 171575832 -81680751 + THE1B LTR MaLR 1 364 0 219 103 0 0 chr2 171576278 171576317 -81680266 + (A)n Simple_repeat Simple_repeat 1 39 0 1732 148 57 15 chr2 171577241 171577572 -81679011 - Tigger7 DNA MER2_type 0 2587 2243 1563 190 0 7 chr2 171577570 171577844 -81678739 + Tigger7 DNA MER2_type 75 346 -204 * 524 367 47 56 chr2 171578165 171578506 -81678077 - L2 LINE L2 0 3272 2935 658 311 145 51 chr2 171578538 171579394 -81677189 - L2 LINE L2 -557 2757 1822 315 206 0 15 chr2 171581259 171581327 -81675256 + Charlie4 DNA MER1_type 1888 1954 -7 324 48 0 0 chr2 171581931 171581973 -81674610 + (CA)n Simple_repeat Simple_repeat 2 43 0 35 24 0 0 chr2 171583201 171583243 -81673340 + AT_rich Low_complexity Low_complexity 1 42 0 212 167 0 24 chr2 171584650 171584692 -81671891 + (CA)n Simple_repeat Simple_repeat 2 42 0 185 0 40 0 chr2 171584821 171584846 -81671737 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2039 122 35 0 chr2 171585739 171586026 -81670557 - AluSx SINE Alu -15 297 1 27 62 0 0 chr2 171586123 171586171 -81670412 + AT_rich Low_complexity Low_complexity 1 48 0 195 304 63 63 chr2 171587574 171587653 -81668930 - L2 LINE L2 0 3272 3194 229 248 208 10 chr2 171590676 171590777 -81665806 - MIR3 SINE MIR -21 187 67 28 29 0 0 chr2 171591817 171591852 -81664731 + AT_rich Low_complexity Low_complexity 1 35 0 25 65 0 0 chr2 171592775 171592821 -81663762 + AT_rich Low_complexity Low_complexity 1 46 0 230 256 0 13 chr2 171592932 171593010 -81663573 + (TATAA)n Simple_repeat Simple_repeat 4 80 0 231 88 0 0 chr2 171593951 171593985 -81662598 + (A)n Simple_repeat Simple_repeat 1 34 0 288 0 0 0 chr2 171594224 171594256 -81662327 + (A)n Simple_repeat Simple_repeat 1 32 0 25 0 0 0 chr2 171594370 171594395 -81662188 + AT_rich Low_complexity Low_complexity 1 25 0 297 0 0 0 chr2 171594775 171594808 -81661775 + (A)n Simple_repeat Simple_repeat 1 33 0 22 0 0 0 chr2 171594924 171594946 -81661637 + AT_rich Low_complexity Low_complexity 1 22 0 375 245 117 0 chr2 171595604 171595698 -81660885 + L1MDb LINE L1 9 113 -6296 294 182 13 39 chr2 171595724 171595801 -81660782 + L1MDb LINE L1 316 390 -6019 1873 202 64 25 chr2 171596031 171596517 -81660066 + MLT1D LTR MaLR 1 505 0 319 244 148 0 chr2 171596653 171596768 -81659815 + HsTC2 DNA Tc2 4 135 -1763 267 229 16 0 chr2 171596767 171596828 -81659755 + HsTC2 DNA Tc2 1251 1312 -586 * 496 261 15 0 chr2 171596844 171596974 -81659609 + HsTC2 DNA Tc2 1564 1695 -203 255 257 27 0 chr2 171596975 171597049 -81659534 + (TATATG)n Simple_repeat Simple_repeat 1 76 0 541 222 19 48 chr2 171597051 171597258 -81659325 + HsTC2 DNA Tc2 1698 1898 0 3021 162 79 64 chr2 171597723 171598444 -81658139 + L1MB5 LINE L1 5442 6173 -1 22 70 0 0 chr2 171600391 171600434 -81656149 + AT_rich Low_complexity Low_complexity 1 43 0 686 174 181 0 chr2 171600974 171601123 -81655460 + MER5A DNA MER1_type 14 189 0 198 0 0 0 chr2 171601124 171601146 -81655437 + (A)n Simple_repeat Simple_repeat 1 22 0 8261 149 31 95 chr2 171601909 171603462 -81653121 + L1M1 LINE L1 9 1660 -5905 222 37 0 0 chr2 171603462 171603489 -81653094 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2231 104 0 0 chr2 171603492 171603781 -81652802 - AluSq SINE Alu -24 289 1 8261 149 31 95 chr2 171603781 171603958 -81652625 + L1M1 LINE L1 1445 1632 -5933 209 274 9 0 chr2 171604399 171604505 -81652078 + CT-rich Low_complexity Low_complexity 1 107 0 647 232 88 45 chr2 171604595 171604869 -81651714 + MLT1D LTR MaLR 1 262 -128 400 340 21 34 chr2 171604877 171605115 -81651468 + HAL1 LINE L1 1249 1483 -1024 14855 144 55 59 chr2 171605508 171607864 -81648719 + L1PB1 LINE L1 11 2377 -4490 1097 124 37 0 chr2 171607864 171608025 -81648558 + AluSc SINE Alu 141 307 -2 14855 144 55 59 chr2 171608025 171608284 -81648299 + L1PB1 LINE L1 2377 2636 -4231 1793 130 4 0 chr2 171608284 171608538 -81648045 + AluSx SINE Alu 27 281 -31 2331 125 30 25 chr2 171608538 171608899 -81647684 - THE1B LTR MaLR -1 363 1 14855 144 55 59 chr2 171608899 171612660 -81643923 + L1PB1 LINE L1 2635 6521 -346 225 94 0 0 chr2 171612660 171612692 -81643891 + (CAGA)n Simple_repeat Simple_repeat 2 33 0 14855 144 55 59 chr2 171612692 171613034 -81643549 + L1PB1 LINE L1 6521 6863 -4 651 287 83 78 chr2 171614234 171614826 -81641757 + MLT1G1 LTR MaLR 1 595 0 27 29 0 0 chr2 171616485 171616519 -81640064 + AT_rich Low_complexity Low_complexity 1 34 0 274 351 68 14 chr2 171616679 171616827 -81639756 - MER5A DNA MER1_type -5 184 29 193 183 130 126 chr2 171616888 171617077 -81639506 - MIR3 SINE MIR -65 143 2 * 402 318 15 42 chr2 171617077 171617241 -81639342 - MER5A DNA MER1_type -12 177 7 715 179 144 20 chr2 171617269 171617464 -81639119 - MER20 DNA MER1_type 0 219 1 24 0 0 0 chr2 171617496 171617520 -81639063 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 171617615 171617636 -81638947 + AT_rich Low_complexity Low_complexity 1 21 0 333 0 0 0 chr2 171618693 171618730 -81637853 + (TA)n Simple_repeat Simple_repeat 1 37 0 1347 242 108 18 chr2 171619392 171619826 -81636757 + L1ME3A LINE L1 5692 6164 -6 3038 138 21 27 chr2 171620363 171620921 -81635662 + L1MB3 LINE L1 5591 6145 -38 1553 299 63 27 chr2 171621399 171621570 -81635013 - L2 LINE L2 -1 3312 3149 2203 166 77 0 chr2 171621570 171621962 -81634621 - MSTB LTR MaLR -1 425 4 1553 299 63 27 chr2 171621962 171622693 -81633890 - L2 LINE L2 -164 3149 2371 1004 217 57 143 chr2 171623897 171624318 -81632265 + MLT1D LTR MaLR 1 390 0 2281 70 40 0 chr2 171624730 171625028 -81631555 - AluY SINE Alu -1 310 1 299 228 0 0 chr2 171625252 171625309 -81631274 + AluSp SINE Alu 129 185 -118 22 70 0 0 chr2 171625745 171625788 -81630795 + AT_rich Low_complexity Low_complexity 1 43 0 21 71 0 0 chr2 171626374 171626416 -81630167 + AT_rich Low_complexity Low_complexity 1 42 0 189 171 0 0 chr2 171626794 171626829 -81629754 + A-rich Low_complexity Low_complexity 1 35 0 563 249 113 42 chr2 171627932 171628365 -81628218 - L1ME4a LINE L1 -2 6119 5656 182 345 81 0 chr2 171629108 171629195 -81627388 - L2 LINE L2 -667 2647 2554 1072 261 52 52 chr2 171630637 171630872 -81625711 - L2 LINE L2 -9 3304 3071 2143 129 0 0 chr2 171630872 171631175 -81625408 - AluSg SINE Alu -7 303 1 1072 261 52 52 chr2 171631175 171631551 -81625032 - L2 LINE L2 -242 3071 2694 1973 139 3 0 chr2 171632018 171632312 -81624271 - AluSx SINE Alu -17 295 1 228 294 88 0 chr2 171632813 171632915 -81623668 + L2 LINE L2 294 404 -2910 272 296 9 9 chr2 171632918 171633026 -81623557 + L1MEc LINE L1 1643 1750 -4646 235 266 39 49 chr2 171633264 171633467 -81623116 + L1MEc LINE L1 2032 2232 -4164 1813 121 16 77 chr2 171633704 171634017 -81622566 - AluSx SINE Alu -18 294 1 189 306 16 0 chr2 171634121 171634183 -81622400 + MIR3 SINE MIR 118 180 -28 576 200 36 0 chr2 171634684 171634794 -81621789 + FRAM SINE Alu 42 155 -21 30 0 0 0 chr2 171634794 171634824 -81621759 + AT_rich Low_complexity Low_complexity 1 30 0 1156 151 24 63 chr2 171634861 171635113 -81621470 - L1PA16 LINE L1 -1 6165 5924 3281 147 57 44 chr2 171635113 171636185 -81620398 + L1PA16 LINE L1 4651 5740 -426 1944 139 0 26 chr2 171636185 171636494 -81620089 + AluSx SINE Alu 1 301 -11 3281 147 57 44 chr2 171636494 171636664 -81619919 + L1PA16 LINE L1 5740 5906 -260 267 339 45 0 chr2 171638147 171638259 -81618324 + Charlie2 DNA MER1_type 203 319 -2543 898 206 128 47 chr2 171638269 171638420 -81618163 + Charlie2 DNA MER1_type 1859 1996 -866 1595 208 143 18 chr2 171638420 171638867 -81617716 + MLT1D LTR MaLR 1 503 -2 898 206 128 47 chr2 171638867 171639098 -81617485 + Charlie2 DNA MER1_type 1996 2272 -590 6357 162 71 9 chr2 171639559 171640801 -81615782 + L1M3f LINE L1 3 1648 -4065 4478 172 41 51 chr2 171641053 171641547 -81615036 - L1MA9 LINE L1 -38 6274 5777 204 97 0 0 chr2 171641547 171641578 -81615005 + (TG)n Simple_repeat Simple_repeat 2 32 0 4478 172 41 51 chr2 171641578 171642047 -81614536 - L1MA9 LINE L1 -535 5777 5333 1879 128 13 42 chr2 171642047 171642353 -81614230 - AluSp SINE Alu -14 299 3 4478 172 41 51 chr2 171642353 171642493 -81614090 - L1MA9 LINE L1 -979 5333 5193 2085 128 0 3 chr2 171642756 171643104 -81613479 + AluSx SINE Alu 1 347 0 977 281 108 9 chr2 171643281 171643605 -81612978 + MLT1J2 LTR MaLR 81 436 -14 341 298 123 19 chr2 171643669 171643978 -81612605 + L1ME4a LINE L1 5512 5852 -269 313 327 122 44 chr2 171644015 171644131 -81612452 + MLT1K LTR MaLR 13 119 -469 332 271 144 43 chr2 171644131 171644319 -81612264 - MER63A DNA MER1_type 0 210 4 313 327 122 44 chr2 171644319 171644563 -81612020 + MLT1K LTR MaLR 119 401 -187 722 207 27 7 chr2 171644570 171644720 -81611863 + MLT1A1 LTR MaLR 1 153 -212 249 290 116 92 chr2 171644773 171644980 -81611603 + L2 LINE L2 2936 3147 -125 2307 172 33 2 chr2 171644987 171645406 -81611177 - MSTB1 LTR MaLR 0 432 1 2134 73 40 0 chr2 171646854 171647129 -81609454 + AluSp SINE Alu 7 292 -21 56 16 0 0 chr2 171648776 171648839 -81607744 + AT_rich Low_complexity Low_complexity 1 63 0 23 92 0 0 chr2 171648858 171648923 -81607660 + AT_rich Low_complexity Low_complexity 1 65 0 425 385 125 5 chr2 171649656 171650040 -81606543 + L2 LINE L2 2819 3248 -24 27 49 0 0 chr2 171650576 171650617 -81605966 + AT_rich Low_complexity Low_complexity 1 41 0 430 293 47 37 chr2 171650685 171650900 -81605683 - MLT1J LTR MaLR -3 508 292 183 100 0 0 chr2 171651581 171651611 -81604972 + (CA)n Simple_repeat Simple_repeat 1 30 0 451 213 138 19 chr2 171652112 171652272 -81604311 + MER104 DNA MER2_type 1 179 -1 3907 114 12 3 chr2 171652464 171653062 -81603521 - L1PB1 LINE L1 -3 6148 5546 424 330 75 21 chr2 171653140 171653328 -81603255 - MIR3 SINE MIR -6 202 5 310 269 85 14 chr2 171653988 171654129 -81602454 - MARNA DNA Mariner -126 460 310 369 266 107 12 chr2 171654809 171654978 -81601605 + MIR SINE MIR 34 218 -44 249 348 26 9 chr2 171655225 171655340 -81601243 - L2 LINE L2 -5 3308 3192 393 333 114 15 chr2 171655817 171656018 -81600565 - MIR SINE MIR -11 251 31 199 211 0 0 chr2 171656437 171656475 -81600108 - L2 LINE L2 -13 3300 3263 433 319 107 45 chr2 171656475 171656924 -81599659 + MLT1J LTR MaLR 1 477 -34 2082 106 0 7 chr2 171657899 171658210 -81598373 + AluSc SINE Alu 1 309 0 282 29 0 0 chr2 171658436 171658471 -81598112 + (CA)n Simple_repeat Simple_repeat 1 35 0 517 272 20 27 chr2 171658653 171658800 -81597783 + MIR3 SINE MIR 20 165 -43 30 45 0 0 chr2 171659878 171659922 -81596661 + AT_rich Low_complexity Low_complexity 1 44 0 334 279 66 37 chr2 171659952 171660088 -81596495 - MIR3 SINE MIR -3 205 66 21 71 0 0 chr2 171660774 171660816 -81595767 + AT_rich Low_complexity Low_complexity 1 42 0 1735 76 0 9 chr2 171662916 171663140 -81593443 + AluY SINE Alu 84 305 -6 246 304 49 20 chr2 171663192 171663294 -81593289 - L2 LINE L2 -4 3309 3205 240 308 141 26 chr2 171664054 171664210 -81592373 + MIR SINE MIR 63 236 -26 350 167 281 18 chr2 171664453 171664567 -81592016 - MIR SINE MIR -10 252 109 187 250 0 23 chr2 171664823 171664867 -81591716 - L2 LINE L2 -13 3300 3258 544 113 0 0 chr2 171664997 171665077 -81591506 - MADE1 DNA Mariner 0 80 1 326 232 61 0 chr2 171665367 171665449 -81591134 - MIR SINE MIR -45 217 131 208 289 39 29 chr2 171666012 171666116 -81590467 + L2 LINE L2 3179 3283 -30 2270 88 14 3 chr2 171667081 171667375 -81589208 - AluSc SINE Alu -12 297 1 1654 155 48 14 chr2 171667502 171667792 -81588791 + AluJo SINE Alu 6 305 -7 273 290 138 29 chr2 171667822 171667960 -81588623 + HAL1b LINE L1 295 447 -901 306 373 26 36 chr2 171667997 171668190 -81588393 + HAL1b LINE L1 453 643 -705 23 0 0 0 chr2 171669138 171669161 -81587422 + AT_rich Low_complexity Low_complexity 1 23 0 313 264 23 106 chr2 171669437 171669702 -81586881 + L1MDa LINE L1 2281 2523 -4017 339 315 88 26 chr2 171669793 171670066 -81586517 + L1MDa LINE L1 3706 3995 -2545 1770 145 180 11 chr2 171670150 171670516 -81586067 + MSTA LTR MaLR 1 428 0 2190 123 0 0 chr2 171670791 171671091 -81585492 + AluSg SINE Alu 1 300 -10 344 277 106 50 chr2 171671260 171671361 -81585222 + L1MB8 LINE L1 5254 5348 -830 324 0 0 0 chr2 171671361 171671397 -81585186 + (CA)n Simple_repeat Simple_repeat 1 36 0 344 277 106 50 chr2 171671397 171671930 -81584653 + L1MB8 LINE L1 5348 5930 -248 3039 169 26 30 chr2 171671961 171672346 -81584237 - MER6A DNA MER2_type -261 604 220 207 0 0 0 chr2 171672346 171672369 -81584214 + (CA)n Simple_repeat Simple_repeat 1 23 0 3039 169 26 30 chr2 171672369 171672588 -81583995 - MER6A DNA MER2_type -645 220 2 1094 111 0 0 chr2 171672756 171672900 -81583683 + AluSg/x SINE Alu 158 301 -11 1707 197 38 80 chr2 171673381 171673908 -81582675 + MLT1D LTR MaLR 1 505 0 998 303 14 43 chr2 171674156 171674579 -81582004 + L2 LINE L2 2156 2566 -748 2196 86 0 0 chr2 171674579 171674895 -81581688 - AluSg1 SINE Alu 0 316 1 567 311 40 31 chr2 171675044 171675269 -81581314 + L2 LINE L2 59 285 -3029 2138 129 0 0 chr2 171725611 171725920 -81530663 - AluSc SINE Alu 0 309 1 238 196 39 0 chr2 171725939 171725990 -81530593 - L2 LINE L2 0 3313 3261 606 273 139 0 chr2 171725992 171726164 -81530419 + MIR SINE MIR 20 215 -47 207 310 17 0 chr2 171726202 171726260 -81530323 - L2 LINE L2 -50 3222 3164 28 0 0 0 chr2 171726993 171727021 -81529562 + AT_rich Low_complexity Low_complexity 1 28 0 186 103 0 0 chr2 171727841 171727870 -81528713 + (CA)n Simple_repeat Simple_repeat 2 30 0 222 37 0 0 chr2 171728798 171728825 -81527758 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 378 252 9 78 chr2 171728826 171728943 -81527640 - L1MC/D LINE L1 -451 5711 5615 736 314 105 21 chr2 171728944 171729376 -81527207 - LTR33 LTR ERVL 0 521 15 603 292 46 15 chr2 171729386 171729645 -81526938 - L1MC/D LINE L1 -585 5577 5336 955 289 78 25 chr2 171729649 171730324 -81526259 + L1MC/D LINE L1 4619 5329 -817 230 372 83 25 chr2 171730369 171730490 -81526093 + L2 LINE L2 3144 3271 -1 1688 77 53 20 chr2 171731250 171731496 -81525087 + L1PA7 LINE L1 5887 6140 -14 225 0 0 0 chr2 171731501 171731526 -81525057 + (TAA)n Simple_repeat Simple_repeat 2 26 0 1010 134 45 0 chr2 171732205 171732384 -81524199 + MER53 DNA DNA 3 189 0 691 249 101 92 chr2 171732809 171733146 -81523437 - MLT1H LTR MaLR -199 350 11 421 209 76 29 chr2 171734300 171734405 -81522178 - MIR SINE MIR -120 142 33 366 23 0 0 chr2 171734559 171734602 -81521981 + (CA)n Simple_repeat Simple_repeat 2 44 0 32 0 0 0 chr2 171734756 171734788 -81521795 + AT_rich Low_complexity Low_complexity 1 32 0 23 33 0 0 chr2 171735050 171735080 -81521503 + AT_rich Low_complexity Low_complexity 1 30 0 604 310 178 9 chr2 171735327 171735766 -81520817 - L1ME3 LINE L1 -296 5866 5354 228 243 78 97 chr2 171739870 171739973 -81516610 + L2 LINE L2 3208 3308 -5 448 147 54 54 chr2 171741240 171741369 -81515214 - MER96B DNA MER1_type? -245 172 44 397 310 74 26 chr2 171741536 171741807 -81514776 - L1ME3A LINE L1 -302 5868 5585 21 0 0 0 chr2 171741846 171741867 -81514716 + AT_rich Low_complexity Low_complexity 1 21 0 192 397 66 16 chr2 171742257 171742378 -81514205 + L2 LINE L2 3138 3264 -8 321 256 87 30 chr2 171747532 171747679 -81508904 + MIR SINE MIR 3 151 -67 30 0 0 0 chr2 171749945 171749975 -81506608 + AT_rich Low_complexity Low_complexity 1 30 0 806 180 40 112 chr2 171750673 171750951 -81505632 + MIR SINE MIR 3 260 -2 297 51 0 0 chr2 171751104 171751143 -81505440 + (CA)n Simple_repeat Simple_repeat 2 40 0 505 315 85 6 chr2 171752750 171752915 -81503668 + MER5B DNA MER1_type 1 178 0 41 58 0 0 chr2 171753516 171753585 -81502998 + AT_rich Low_complexity Low_complexity 1 69 0 26 74 0 0 chr2 171753655 171753709 -81502874 + AT_rich Low_complexity Low_complexity 1 54 0 2318 64 17 3 chr2 171753843 171754139 -81502444 + AluY SINE Alu 1 300 -11 815 203 6 13 chr2 171754212 171754370 -81502213 - FRAM SINE Alu -19 157 1 181 413 80 0 chr2 171756779 171756929 -81499654 - L2 LINE L2 -2 3270 3109 1615 273 148 49 chr2 171757205 171757256 -81499327 + L2 LINE L2 1724 1769 -1544 246 62 0 0 chr2 171757256 171757288 -81499295 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 1615 273 148 49 chr2 171757288 171757310 -81499273 + L2 LINE L2 1769 1787 -1526 1976 119 0 42 chr2 171757310 171757620 -81498963 + AluSq SINE Alu 11 307 -6 1615 273 148 49 chr2 171757620 171758712 -81497871 + L2 LINE L2 1787 3076 -237 1978 135 10 0 chr2 171758712 171759000 -81497583 - AluSx SINE Alu -19 293 3 1615 273 148 49 chr2 171759000 171759264 -81497319 + L2 LINE L2 3076 3312 -1 2106 123 3 0 chr2 171760997 171761311 -81495272 + AluSq SINE Alu 1 313 0 207 0 0 0 chr2 171762067 171762090 -81494493 + (TTAAA)n Simple_repeat Simple_repeat 3 25 0 2278 90 0 3 chr2 171762125 171762424 -81494159 - AluSg1 SINE Alu -11 298 1 452 333 16 21 chr2 171762638 171762827 -81493756 + MIR SINE MIR 75 262 0 22 0 0 0 chr2 171764228 171764250 -81492333 + AT_rich Low_complexity Low_complexity 1 22 0 294 280 12 0 chr2 171765497 171765586 -81490997 - MIR3 SINE MIR -17 191 100 243 0 0 0 chr2 171765716 171765743 -81490840 + (CA)n Simple_repeat Simple_repeat 2 28 0 250 259 123 12 chr2 171766599 171766680 -81489903 + MIR SINE MIR 163 252 -10 1661 164 0 37 chr2 171769126 171769424 -81487159 - AluJo SINE Alu -23 289 3 1341 239 65 25 chr2 171770924 171771367 -81485216 - MLT1C LTR MaLR -6 461 1 380 329 129 0 chr2 171774211 171774381 -81482202 - MIR SINE MIR -50 212 21 787 233 14 45 chr2 171774587 171774810 -81481773 + MER20 DNA MER1_type 3 218 -1 21 0 0 0 chr2 171774853 171774874 -81481709 + AT_rich Low_complexity Low_complexity 1 21 0 1616 220 41 112 chr2 171774894 171775341 -81481242 + L1MC5 LINE L1 6636 7113 -848 189 0 0 0 chr2 171775341 171775362 -81481221 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 1616 220 41 112 chr2 171775362 171775378 -81481205 + L1MC5 LINE L1 7113 7129 -832 2054 109 0 0 chr2 171775378 171775654 -81480929 - AluSx SINE Alu -36 276 1 1616 220 41 112 chr2 171775654 171776086 -81480497 + L1MC5 LINE L1 7129 7469 -492 338 329 82 0 chr2 171776153 171776299 -81480284 + L1M4 LINE L1 2875 3032 -3114 297 0 0 0 chr2 171776663 171776696 -81479887 + (TA)n Simple_repeat Simple_repeat 2 34 0 210 338 0 0 chr2 171776746 171776814 -81479769 - MIR SINE MIR -146 116 49 1889 163 7 3 chr2 171776974 171777280 -81479303 - AluJb SINE Alu -5 307 1 284 336 134 0 chr2 171777664 171777783 -81478800 - MIR3 SINE MIR -27 181 47 402 204 88 29 chr2 171778013 171778150 -81478433 - L1ME4a LINE L1 -3 6118 5974 267 247 0 49 chr2 171780227 171780308 -81476275 + MIR SINE MIR 185 261 -1 24 32 0 0 chr2 171780669 171780700 -81475883 + AT_rich Low_complexity Low_complexity 1 31 0 22 56 0 0 chr2 171780809 171780845 -81475738 + AT_rich Low_complexity Low_complexity 1 36 0 1321 163 0 33 chr2 171781812 171782057 -81474526 + AluJb SINE Alu 44 280 -32 252 122 0 0 chr2 171782059 171782100 -81474483 + (CAA)n Simple_repeat Simple_repeat 2 42 0 717 263 8 59 chr2 171782575 171782811 -81473772 + MER58A DNA MER1_type 1 224 0 462 309 177 22 chr2 171783092 171783600 -81472983 - HAL1 LINE L1 -1626 881 295 2267 85 0 0 chr2 171784335 171784649 -81471934 + AluY SINE Alu 1 314 0 345 204 93 33 chr2 171785346 171785507 -81471076 + MER3 DNA MER1_type 7 208 -1 920 203 17 0 chr2 171785519 171785696 -81470887 + MER5A DNA MER1_type 4 183 -6 836 277 279 12 chr2 171785698 171786270 -81470313 - L2 LINE L2 -103 3210 2468 303 225 125 89 chr2 171788279 171788559 -81468024 + L1ME4a LINE L1 5829 6118 -3 950 178 6 12 chr2 171788562 171788731 -81467852 + AluJo SINE Alu 123 290 -22 361 279 19 19 chr2 171789519 171789623 -81466960 - MIR SINE MIR -87 121 18 1157 190 19 9 chr2 171790226 171790437 -81466146 - MER46A DNA MER2_type 0 236 24 206 119 48 0 chr2 171790485 171790527 -81466056 + (CATA)n Simple_repeat Simple_repeat 4 47 0 26 0 0 0 chr2 171790544 171790570 -81466013 + AT_rich Low_complexity Low_complexity 1 26 0 1145 191 19 0 chr2 171791731 171791940 -81464643 + AluJb SINE Alu 90 302 -10 190 271 34 34 chr2 171792159 171792218 -81464365 - L2 LINE L2 -4 3309 3251 2189 117 7 0 chr2 171792555 171792854 -81463729 + AluSx SINE Alu 1 301 -11 23 0 0 0 chr2 171793932 171793955 -81462628 + AT_rich Low_complexity Low_complexity 1 23 0 520 252 17 0 chr2 171796102 171796221 -81460362 + FLAM_A SINE Alu 1 121 -12 585 257 268 4 chr2 171797612 171797873 -81458710 + L2 LINE L2 2386 2715 -599 456 108 0 0 chr2 171797873 171797938 -81458645 + U3 snRNA snRNA 1 65 -152 219 272 86 37 chr2 171797963 171798044 -81458539 + L2 LINE L2 2701 2785 -529 402 204 68 0 chr2 171798047 171798150 -81458433 - Tigger5 DNA MER2_type 0 2323 2214 305 247 14 14 chr2 171798184 171798257 -81458326 - Tigger5 DNA MER2_type 0 2323 2251 260 236 0 0 chr2 171798226 171798281 -81458302 - Tigger5 DNA MER2_type -2268 55 1 * 309 231 49 112 chr2 171798493 171798636 -81457947 + L2 LINE L2 3180 3313 0 1753 161 32 0 chr2 171799054 171799334 -81457249 - AluSx SINE Alu -21 291 3 28 0 0 0 chr2 171800087 171800115 -81456468 + AT_rich Low_complexity Low_complexity 1 28 0 1881 289 61 64 chr2 171801366 171802329 -81454254 + L2 LINE L2 1883 2837 -476 473 215 196 13 chr2 171802329 171802487 -81454096 + MER5A DNA MER1_type 3 189 0 1881 289 61 64 chr2 171802487 171802951 -81453632 + L2 LINE L2 2837 3301 -12 747 309 76 0 chr2 171803727 171803950 -81452633 - MIR SINE MIR -18 244 5 188 237 224 0 chr2 171804092 171804168 -81452415 - MIR SINE MIR -89 173 81 486 285 95 13 chr2 171804330 171804488 -81452095 + MIR3 SINE MIR 20 190 -18 497 195 124 0 chr2 171805129 171805242 -81451341 + MER3 DNA MER1_type 48 127 -82 * 1144 167 42 45 chr2 171805239 171805301 -81451282 + MER3 DNA MER1_type 2234 2295 -329 1846 164 31 0 chr2 171805301 171805588 -81450995 - AluSx SINE Alu -10 302 7 1144 167 42 45 chr2 171805588 171805812 -81450771 + MER3 DNA MER1_type 2295 2519 -105 706 231 327 7 chr2 171805817 171806138 -81450445 + MLT1F1 LTR MaLR 3 427 -140 1455 202 40 7 chr2 171806453 171806725 -81449858 + AluJb SINE Alu 1 281 -31 330 156 0 0 chr2 171807618 171807682 -81448901 + GA-rich Low_complexity Low_complexity 1 64 0 267 310 125 42 chr2 171808376 171808553 -81448030 + MIR SINE MIR 12 212 -50 763 150 125 12 chr2 171808553 171808713 -81447870 - MER5B DNA MER1_type 0 178 1 267 310 125 42 chr2 171808713 171808751 -81447832 + MIR SINE MIR 212 245 -17 900 189 18 6 chr2 171809211 171809395 -81447188 + AluJb SINE Alu 121 306 0 186 289 22 0 chr2 171809677 171809722 -81446861 - L2 LINE L2 -7 3265 3220 3175 240 54 40 chr2 171810954 171812310 -81444273 + L1MC4a LINE L1 4975 7807 -1 248 299 227 7 chr2 171812335 171812489 -81444094 + MER5A DNA MER1_type 2 189 0 2032 114 4 0 chr2 171812688 171812961 -81443622 + AluSp SINE Alu 1 274 -39 487 113 0 0 chr2 171812961 171813032 -81443551 + AluSp/q SINE Alu 227 297 -16 935 219 13 75 chr2 171814220 171814258 -81442325 + MER58A DNA MER1_type 11 50 -2370 2364 78 0 0 chr2 171814258 171814554 -81442029 - AluY SINE Alu -12 299 4 935 219 13 75 chr2 171814554 171814743 -81441840 + MER58A DNA MER1_type 50 224 0 1202 274 82 14 chr2 171814870 171815311 -81441272 + L1MC5 LINE L1 5466 5936 -1872 1775 171 3 10 chr2 171815456 171815760 -81440823 - AluJo SINE Alu -10 302 1 757 226 67 82 chr2 171815995 171816482 -81440101 + L1MC5 LINE L1 6554 6992 -816 350 294 42 14 chr2 171816690 171816833 -81439750 + L1MC4 LINE L1 7349 7495 -547 229 250 26 66 chr2 171816868 171817020 -81439563 + L1MC5 LINE L1 7390 7535 -426 262 271 105 11 chr2 171817023 171817204 -81439379 + L1MC5 LINE L1 7663 7860 -101 256 296 42 0 chr2 171817380 171817451 -81439132 + MIR3 SINE MIR 118 191 -17 1394 217 31 5 chr2 171817490 171817831 -81438752 - L1MB8 LINE L1 -186 5992 5678 2544 125 72 2 chr2 171817851 171818251 -81438332 + MSTA LTR MaLR 1 428 0 28 29 0 0 chr2 171819386 171819421 -81437162 + AT_rich Low_complexity Low_complexity 1 35 0 1483 91 101 0 chr2 171819878 171820087 -81436496 - MER30 DNA MER1_type 0 230 1 329 313 0 9 chr2 171820552 171820667 -81435916 + L2 LINE L2 3194 3307 -6 752 155 0 0 chr2 171821138 171821254 -81435329 + FLAM_C SINE Alu 1 116 -17 246 359 122 11 chr2 171821599 171821780 -81434803 - MIR SINE MIR -61 201 1 21 0 0 0 chr2 171823756 171823777 -81432806 + AT_rich Low_complexity Low_complexity 1 21 0 810 208 12 75 chr2 171826310 171826551 -81430032 + L1MA9 LINE L1 6049 6274 -38 716 209 40 14 chr2 171826582 171826730 -81429853 + FRAM SINE Alu 6 157 -19 264 301 15 66 chr2 171826733 171826929 -81429654 + L2 LINE L2 1797 1982 -1332 2064 115 32 0 chr2 171827011 171827315 -81429268 - AluSx SINE Alu 0 313 1 558 305 180 42 chr2 171827415 171828302 -81428281 + L2 LINE L2 2286 3313 0 1133 165 55 8 chr2 171828462 171828717 -81427866 - L1MD3 LINE L1 0 7995 7729 261 0 0 0 chr2 171828893 171828922 -81427661 + (CA)n Simple_repeat Simple_repeat 2 30 0 295 328 88 0 chr2 171829376 171829501 -81427082 - Charlie8 DNA MER1_type -2194 223 88 1824 138 15 0 chr2 171829886 171830154 -81426429 + AluSx SINE Alu 1 272 -40 212 0 36 0 chr2 171830660 171830688 -81425895 + (TTG)n Simple_repeat Simple_repeat 2 30 0 24 0 0 0 chr2 171831523 171831547 -81425036 + AT_rich Low_complexity Low_complexity 1 24 0 418 259 50 7 chr2 171831660 171831799 -81424784 + MIR SINE MIR 36 180 -82 25 31 0 0 chr2 171831947 171831979 -81424604 + AT_rich Low_complexity Low_complexity 1 32 0 242 300 17 0 chr2 171833197 171833257 -81423326 - MIR SINE MIR -195 67 7 864 194 55 46 chr2 171834045 171834262 -81422321 + L1MB5 LINE L1 5953 6171 -3 1654 184 6 47 chr2 171834684 171835005 -81421578 + AluJb SINE Alu 4 311 -1 1658 177 7 3 chr2 171835246 171835529 -81421054 + AluJo SINE Alu 1 284 -28 1031 171 143 70 chr2 171836422 171836737 -81419846 + MLT1A1 LTR MaLR 1 338 -27 1318 173 0 0 chr2 171836741 171836943 -81419640 + AluSg/x SINE Alu 74 275 -37 1124 143 122 4 chr2 171838897 171839127 -81417456 + L1MA9 LINE L1 6051 6307 -5 726 145 0 48 chr2 171840268 171840392 -81416191 + AluSq/x SINE Alu 1 118 -194 405 0 0 0 chr2 171840582 171840627 -81415956 + (CA)n Simple_repeat Simple_repeat 2 46 0 591 176 7 120 chr2 171840627 171840769 -81415814 + FLAM_A SINE Alu 5 130 -3 2999 185 27 8 chr2 171841594 171842182 -81414401 + MER6A DNA MER2_type 4 602 -3 30 27 0 0 chr2 171842844 171842881 -81413702 + AT_rich Low_complexity Low_complexity 1 37 0 210 71 0 0 chr2 171843032 171843060 -81413523 + (CAGA)n Simple_repeat Simple_repeat 1 28 0 221 77 51 0 chr2 171843060 171843099 -81413484 + (CATA)n Simple_repeat Simple_repeat 3 43 0 21 0 0 0 chr2 171843545 171843566 -81413017 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr2 171843669 171843691 -81412892 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 1809 143 0 0 chr2 171843704 171843969 -81412614 - AluJo SINE Alu -26 286 22 336 315 157 6 chr2 171844054 171844232 -81412351 + MIR SINE MIR 6 210 -52 187 31 62 0 chr2 171844865 171844897 -81411686 + A-rich Low_complexity Low_complexity 2 35 0 245 257 40 14 chr2 171845763 171845837 -81410746 + MIR SINE MIR 114 189 -73 35 54 0 0 chr2 171848143 171848199 -81408384 + AT_rich Low_complexity Low_complexity 1 56 0 189 0 0 0 chr2 171848267 171848288 -81408295 + (A)n Simple_repeat Simple_repeat 1 21 0 1535 172 4 4 chr2 171848294 171848544 -81408039 + AluJo SINE Alu 41 290 -22 212 336 100 44 chr2 171848913 171849142 -81407441 - MIR SINE MIR -1 261 20 2424 63 0 3 chr2 171850299 171850600 -81405983 + AluY SINE Alu 1 300 -11 3196 237 51 11 chr2 171850938 171852578 -81404005 + L1ME1 LINE L1 4407 6111 -55 1397 185 24 51 chr2 171852579 171852719 -81403864 + AluJo SINE Alu 1 130 -182 2854 10 0 0 chr2 171852719 171853030 -81403553 + AluY SINE Alu 1 311 0 1397 185 24 51 chr2 171853030 171853181 -81403402 + AluJo SINE Alu 130 284 -28 2676 20 0 0 chr2 171854845 171855172 -81401411 + AluYa5 SINE Alu 1 327 0 375 370 84 24 chr2 171855588 171855837 -81400746 - L2 LINE L2 -453 2861 2598 1062 251 161 21 chr2 171856043 171856578 -81400005 - Charlie7 DNA MER1_type -1970 642 33 4477 156 59 8 chr2 171856677 171856837 -81399746 - L1MC2 LINE L1 -25 6319 6169 501 32 0 0 chr2 171856837 171856900 -81399683 + (TC)n Simple_repeat Simple_repeat 2 64 0 234 0 0 0 chr2 171856899 171856925 -81399658 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 4477 156 59 8 chr2 171856900 171857593 -81398990 - L1MC2 LINE L1 -175 6169 5449 210 320 0 0 chr2 171857824 171857874 -81398709 + MIR SINE MIR 48 97 -165 1632 187 7 23 chr2 171858256 171858566 -81398017 - AluJb SINE Alu -7 305 1 1891 117 52 31 chr2 171858727 171859017 -81397566 + AluSx SINE Alu 3 298 -14 1972 134 7 17 chr2 171859346 171859681 -81396902 - AluSx SINE Alu 0 312 1 24 91 0 0 chr2 171861880 171861946 -81394637 + AT_rich Low_complexity Low_complexity 1 66 0 628 184 8 8 chr2 171862401 171862526 -81394057 + HsTC2 DNA Tc2 626 750 -1148 479 279 88 25 chr2 171862528 171862810 -81393773 + HsTC2 DNA Tc2 1286 1762 -136 281 263 61 0 chr2 171862964 171863063 -81393520 + HsTC2 DNA Tc2 1794 1898 0 237 253 187 33 chr2 171863865 171863956 -81392627 - L2 LINE L2 0 3272 3168 366 284 99 31 chr2 171864156 171864318 -81392265 + MIR SINE MIR 84 256 -6 302 354 55 0 chr2 171865440 171865567 -81391016 - MIR SINE MIR -80 182 49 23 0 0 0 chr2 171865661 171865684 -81390899 + AT_rich Low_complexity Low_complexity 1 23 0 224 319 21 69 chr2 171865771 171865915 -81390668 + MIR SINE MIR 125 261 -1 2025 144 3 0 chr2 171866679 171866978 -81389605 + AluSx SINE Alu 1 300 -12 344 296 111 19 chr2 171867020 171867182 -81389401 + MIR SINE MIR 8 184 -78 274 350 78 30 chr2 171867696 171868077 -81388506 - L2 LINE L2 -204 3068 2673 21 0 0 0 chr2 171868193 171868214 -81388369 + AT_rich Low_complexity Low_complexity 1 21 0 202 188 0 0 chr2 171868923 171868955 -81387628 + polypurine Low_complexity Low_complexity 2 33 0 228 234 21 85 chr2 171869646 171869740 -81386843 + L1MC4 LINE L1 6615 6702 -1340 * 239 261 23 23 chr2 171869700 171869788 -81386795 - L1MC4 LINE L1 -1340 6702 6615 227 287 0 43 chr2 171869803 171869897 -81386686 - L1MC4 LINE L1 -1339 6703 6614 * 240 247 0 82 chr2 171869859 171869956 -81386627 + L1MC4 LINE L1 6614 6702 -1340 487 219 11 15 chr2 171869957 171870350 -81386233 + (TA)n Simple_repeat Simple_repeat 1 391 0 1555 178 43 7 chr2 171870351 171870632 -81385951 - AluJb SINE Alu -21 291 1 21 0 0 0 chr2 171871082 171871103 -81385480 + AT_rich Low_complexity Low_complexity 1 21 0 2044 128 0 26 chr2 171871377 171871690 -81384893 - AluSx SINE Alu -2 310 6 1655 195 0 3 chr2 171871790 171872082 -81384501 - AluJb SINE Alu -21 291 1 2112 107 0 4 chr2 171872443 171872748 -81383835 - AluSg SINE Alu 0 304 1 295 255 89 57 chr2 171873599 171873756 -81382827 - MIR SINE MIR -54 208 47 446 0 19 0 chr2 171874291 171874345 -81382238 + (TTA)n Simple_repeat Simple_repeat 2 56 0 1381 126 5 5 chr2 171874348 171874547 -81382036 - AluSg/x SINE Alu -30 282 84 182 352 37 0 chr2 171874822 171874876 -81381707 + L2 LINE L2 3249 3304 -9 308 316 62 34 chr2 171875453 171875630 -81380953 + L1ME4a LINE L1 5729 5910 -211 2232 116 3 0 chr2 171875661 171875963 -81380620 + AluSx SINE Alu 1 303 -9 445 238 12 61 chr2 171876040 171876204 -81380379 - MER103 DNA DNA -8 158 3 522 327 58 13 chr2 171876494 171876720 -81379863 + MIR SINE MIR 8 243 -19 271 286 156 7 chr2 171878106 171878241 -81378342 - MIR SINE MIR -62 146 2 204 127 55 0 chr2 171878441 171878496 -81378087 + T-rich Low_complexity Low_complexity 3 60 0 2025 146 7 0 chr2 171878501 171878810 -81377773 - AluSx SINE Alu -1 311 1 485 234 39 0 chr2 171879964 171880118 -81376465 + L1MC4a LINE L1 5730 5889 -1919 584 247 78 0 chr2 171880194 171880360 -81376223 + Charlie5 DNA MER1_type 2 180 -2432 350 134 75 0 chr2 171880405 171880472 -81376111 + Charlie5 DNA MER1_type 2513 2584 -28 21 57 0 0 chr2 171881292 171881327 -81375256 + AT_rich Low_complexity Low_complexity 1 35 0 51 26 0 13 chr2 171882579 171882602 -81373981 + AT_rich Low_complexity Low_complexity 1 23 -52 2072 146 3 0 chr2 171882602 171882911 -81373672 + AluSx SINE Alu 1 310 -2 51 26 0 13 chr2 171882911 171882963 -81373620 + AT_rich Low_complexity Low_complexity 23 75 0 29 0 0 0 chr2 171883004 171883033 -81373550 + AT_rich Low_complexity Low_complexity 1 29 0 321 258 81 84 chr2 171883851 171884161 -81372422 + MARNA DNA Mariner 21 329 -257 21 36 0 0 chr2 171884252 171884280 -81372303 + AT_rich Low_complexity Low_complexity 1 28 0 2245 86 3 0 chr2 171884335 171884626 -81371957 + AluSp SINE Alu 13 304 -9 1750 134 48 31 chr2 171884640 171884932 -81371651 + AluJb SINE Alu 3 299 -13 2472 60 0 0 chr2 171885011 171885311 -81371272 - AluY SINE Alu -11 300 1 24 0 0 0 chr2 171885388 171885412 -81371171 + AT_rich Low_complexity Low_complexity 1 24 0 675 216 82 18 chr2 171886172 171886343 -81370240 - MER58A DNA MER1_type -3 221 40 3663 166 92 47 chr2 171886351 171887241 -81369342 + L1MB3 LINE L1 5254 6183 0 24 67 0 0 chr2 171887916 171887961 -81368622 + AT_rich Low_complexity Low_complexity 1 45 0 384 256 88 22 chr2 171888040 171888177 -81368406 + MIR SINE MIR 6 151 -111 452 273 37 35 chr2 171888358 171888535 -81368048 + MER5B DNA MER1_type 1 188 -1 334 252 25 8 chr2 171889173 171889292 -81367291 + (TA)n Simple_repeat Simple_repeat 2 122 0 629 195 0 39 chr2 171889462 171889590 -81366993 + FLAM_A SINE Alu 1 123 -10 245 304 73 10 chr2 171890127 171890237 -81366346 + MIR SINE MIR 36 148 -60 626 223 8 8 chr2 171890872 171891002 -81365581 + FLAM_C SINE Alu 1 130 -13 366 248 119 152 chr2 171892281 171892979 -81363604 + L1M2 LINE L1 441 1115 -5734 514 33 11 143 chr2 171894279 171894370 -81362213 - MADE1 DNA Mariner -1 79 1 509 302 76 55 chr2 171895206 171895534 -81361049 + MLT1I LTR MaLR 19 353 -56 2420 100 0 0 chr2 171895636 171895946 -81360637 - AluSq SINE Alu -3 310 1 2171 112 10 3 chr2 171896263 171896566 -81360017 - AluSg SINE Alu -5 305 1 250 309 138 0 chr2 171898673 171898767 -81357816 - L2 LINE L2 -20 3252 3146 425 230 0 20 chr2 171899672 171899772 -81356811 + MIR SINE MIR 7 104 -158 255 188 62 50 chr2 171899903 171899983 -81356600 + MIR SINE MIR 64 144 -64 232 305 142 12 chr2 171900176 171900281 -81356302 - MIR SINE MIR -62 146 34 228 35 0 0 chr2 171900799 171900828 -81355755 + (CAA)n Simple_repeat Simple_repeat 2 30 0 354 286 30 30 chr2 171901102 171901235 -81355348 + MIR SINE MIR 111 243 -19 27 29 0 0 chr2 171902254 171902288 -81354295 + AT_rich Low_complexity Low_complexity 1 34 0 180 296 45 34 chr2 171902405 171902493 -81354090 - MIR3 SINE MIR -9 199 111 804 182 57 17 chr2 171902501 171902677 -81353906 + MER53 DNA DNA 7 189 0 2647 174 40 37 chr2 171902718 171902799 -81353784 - L1MA9 LINE L1 -230 6082 6002 1716 214 24 72 chr2 171902799 171902985 -81353598 - L1MD3 LINE L1 -672 5496 5303 1752 118 0 0 chr2 171902985 171903223 -81353360 - AluSx SINE Alu -12 300 63 1716 214 24 72 chr2 171903223 171903257 -81353326 - L1MD3 LINE L1 -865 5303 5269 312 27 0 0 chr2 171903257 171903294 -81353289 + (CA)n Simple_repeat Simple_repeat 2 38 0 1716 214 24 72 chr2 171903294 171903583 -81353000 - L1MD3 LINE L1 -899 5269 4968 1873 184 0 7 chr2 171903583 171903893 -81352690 - AluJb SINE Alu 0 312 5 180 111 0 0 chr2 171903906 171903933 -81352650 + (TTG)n Simple_repeat Simple_repeat 1 27 0 306 149 0 6 chr2 171903933 171904004 -81352579 - AluJb SINE Alu -175 127 1 1716 214 24 72 chr2 171904004 171904482 -81352101 - L1MD3 LINE L1 -651 5517 5017 3452 117 11 13 chr2 171904781 171905303 -81351280 - Tigger1 DNA MER2_type -3 2415 1895 2133 101 7 0 chr2 171905305 171905593 -81350990 + AluSp SINE Alu 1 290 -23 330 294 0 0 chr2 171905603 171905695 -81350888 + L1MC4 LINE L1 6612 6703 -1339 317 258 40 3 chr2 171905637 171905737 -81350846 - L1MC4 LINE L1 -1339 6703 6614 * 10854 141 25 41 chr2 171905738 171907684 -81348899 - Tigger1 DNA MER2_type -499 1919 5 2204 121 0 0 chr2 171907684 171907981 -81348602 + AluSx SINE Alu 1 297 -15 333 281 50 25 chr2 171908161 171908321 -81348262 - L1MD3 LINE L1 -2830 3316 3153 219 315 11 33 chr2 171908363 171908455 -81348128 + L3 LINE CR1 1456 1545 -32 1833 158 0 7 chr2 171908782 171909079 -81347504 - AluJo SINE Alu -5 307 13 1709 158 56 33 chr2 171909652 171910012 -81346571 - THE1C LTR MaLR 0 375 8 605 157 9 9 chr2 171909993 171910101 -81346482 + 5S rRNA rRNA 1 108 -13 * 260 83 0 0 chr2 171910078 171910114 -81346469 - MSTA LTR MaLR -392 36 1 * 1363 190 45 93 chr2 171911575 171911893 -81344690 + LTR37B LTR ERV1 8 340 -128 186 48 24 48 chr2 171911893 171911935 -81344648 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 2264 90 0 0 chr2 171911938 171912215 -81344368 - AluSq SINE Alu -36 277 1 1824 175 3 7 chr2 171912216 171912513 -81344070 - AluJo SINE Alu -16 296 1 1363 190 45 93 chr2 171912513 171912630 -81343953 + LTR37B LTR ERV1 341 428 -40 22 35 0 0 chr2 171913008 171913037 -81343546 + AT_rich Low_complexity Low_complexity 1 29 0 535 298 49 69 chr2 171915021 171915410 -81341173 + MER31-int LTR ERV1 3672 4052 -884 588 137 51 0 chr2 171915793 171915910 -81340673 + LTR37B LTR ERV1 339 461 -7 24 0 0 0 chr2 171916486 171916510 -81340073 + AT_rich Low_complexity Low_complexity 1 24 0 6669 63 43 0 chr2 171917630 171918488 -81338095 + HERVL-A1 LTR ERVL 4760 5654 0 3166 70 0 2 chr2 171918488 171918887 -81337696 + MLT2A1 LTR ERVL 1 398 -46 288 200 0 0 chr2 171918896 171918956 -81337627 + (CATA)n Simple_repeat Simple_repeat 2 61 0 380 56 0 19 chr2 171918994 171919048 -81337535 + MLT2A1 LTR ERVL 392 444 0 614 284 67 21 chr2 171920373 171920655 -81335928 - L2 LINE L2 -107 3206 2912 259 311 0 0 chr2 171920982 171921043 -81335540 + L2 LINE L2 3245 3305 -8 602 276 72 0 chr2 171921233 171921414 -81335169 + MIR SINE MIR 68 261 -1 206 314 40 32 chr2 171921826 171921950 -81334633 + MIR SINE MIR 122 246 -16 2215 111 0 0 chr2 171922054 171922352 -81334231 + AluSg SINE Alu 1 298 -12 967 184 112 5 chr2 171922481 171922563 -81334020 - AluJo SINE Alu -89 223 151 198 0 0 0 chr2 171922563 171922585 -81333998 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 967 184 112 5 chr2 171922585 171922698 -81333885 - AluJo SINE Alu -161 151 7 2326 109 0 0 chr2 171922737 171923048 -81333535 + AluSx SINE Alu 1 311 -1 2254 107 7 3 chr2 171924213 171924521 -81332062 + AluSg SINE Alu 1 309 -1 253 279 86 64 chr2 171925934 171926074 -81330509 - MIR SINE MIR -11 251 109 288 280 0 32 chr2 171926190 171926283 -81330300 + GA-rich Low_complexity Low_complexity 4 93 0 2175 192 23 21 chr2 171926313 171926745 -81329838 - Tigger2a DNA MER2_type 0 434 2 2230 108 7 0 chr2 171927055 171927351 -81329232 - AluSx SINE Alu -14 298 1 31 26 0 0 chr2 171927424 171927462 -81329121 + AT_rich Low_complexity Low_complexity 1 38 0 255 241 65 169 chr2 171928926 171929216 -81327367 - LTR33A LTR ERVL -113 410 151 489 231 77 23 chr2 171929588 171929718 -81326865 - MIR SINE MIR -47 215 79 327 316 164 11 chr2 171929839 171930016 -81326567 + L2 LINE L2 2570 2773 -541 2543 62 0 0 chr2 171930737 171931041 -81325542 + AluY SINE Alu 1 304 -7 1001 174 6 0 chr2 171932303 171932464 -81324119 - FRAM SINE Alu -18 158 1 573 285 128 29 chr2 171933016 171933297 -81323286 - LTR16A1 LTR ERVL -2 455 147 6071 164 10 4 chr2 171934628 171935670 -81320913 - L1MC1 LINE L1 -18 6315 5268 1264 226 55 58 chr2 171935952 171936723 -81319860 - L1MC5 LINE L1 -42 7919 7033 2109 86 25 62 chr2 171936723 171937048 -81319535 - AluSq SINE Alu 0 313 1 1264 226 55 58 chr2 171937048 171937465 -81319118 - L1MC5 LINE L1 -928 7033 6616 1765 187 0 3 chr2 171937561 171937866 -81318717 - AluJb SINE Alu -8 304 1 820 252 144 33 chr2 171938160 171938640 -81317943 + L1ME4a LINE L1 5482 6014 -107 25 51 0 0 chr2 171938851 171938890 -81317693 + AT_rich Low_complexity Low_complexity 1 39 0 213 336 145 0 chr2 171939016 171939147 -81317436 - MIR SINE MIR -77 185 36 543 183 0 0 chr2 171939224 171939328 -81317255 - L1MA9 LINE L1 0 6312 6209 1725 125 47 3 chr2 171939329 171939625 -81316958 - L1MA9 LINE L1 -194 6118 5810 21 0 0 0 chr2 171939715 171939736 -81316847 + AT_rich Low_complexity Low_complexity 1 21 0 1481 201 7 39 chr2 171940286 171940595 -81315988 - AluJb SINE Alu -13 299 1 468 325 149 0 chr2 171940837 171940991 -81315592 - MER5A DNA MER1_type -1 188 12 504 330 103 0 chr2 171941653 171941838 -81314745 - L3 LINE CR1 -11 1566 1363 2081 122 0 0 chr2 171942635 171942923 -81313660 - AluSx SINE Alu -24 288 1 186 43 0 0 chr2 171942995 171943018 -81313565 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1727 173 53 18 chr2 171945442 171945784 -81310799 - THE1A LTR MaLR -1 354 1 1085 162 17 0 chr2 171946528 171946707 -81309876 + MER5A DNA MER1_type 7 188 -1 625 133 0 0 chr2 171947248 171947338 -81309245 - 5S rRNA rRNA -31 90 1 704 304 112 0 chr2 171948736 171949058 -81307525 + LTR16A LTR ERVL 1 358 -92 192 97 0 0 chr2 171949306 171949337 -81307246 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 21 36 0 0 chr2 171949897 171949925 -81306658 + AT_rich Low_complexity Low_complexity 1 28 0 5375 218 38 19 chr2 171951225 171953582 -81303001 - L1MA9 LINE L1 -25 6287 3883 1723 181 44 0 chr2 171953583 171953881 -81302702 - AluJb SINE Alu -1 311 1 269 195 0 61 chr2 171954031 171954113 -81302470 - L1MC5 LINE L1 -36 7925 7849 261 57 0 0 chr2 171954745 171954780 -81301803 + (TG)n Simple_repeat Simple_repeat 2 36 0 430 276 238 19 chr2 171956453 171956667 -81299916 + MIR SINE MIR 2 262 0 2053 118 0 44 chr2 171956677 171956992 -81299591 - AluSx SINE Alu -11 301 1 21 0 0 0 chr2 171957367 171957388 -81299195 + AT_rich Low_complexity Low_complexity 1 21 0 1968 136 30 0 chr2 171958824 171959125 -81297458 - AluJb SINE Alu -2 310 1 225 217 0 0 chr2 171959221 171959267 -81297316 + L2 LINE L2 3265 3310 -3 830 185 76 0 chr2 171959849 171960006 -81296577 - MER20 DNA MER1_type 0 219 51 396 389 75 4 chr2 171960612 171960877 -81295706 - L3b LINE CR1 -26 1557 1274 263 317 99 0 chr2 171961062 171961163 -81295420 - L3 LINE CR1 -11 1566 1456 223 248 33 25 chr2 171962547 171962668 -81293915 + (TATATG)n Simple_repeat Simple_repeat 5 126 0 1743 145 33 0 chr2 171963419 171963695 -81292888 + MER7A DNA MER2_type 63 345 -1 23 0 0 0 chr2 171964449 171964472 -81292111 + AT_rich Low_complexity Low_complexity 1 23 0 26 50 0 0 chr2 171964554 171964594 -81291989 + AT_rich Low_complexity Low_complexity 1 40 0 262 250 172 44 chr2 171965630 171965801 -81290782 + MIR3 SINE MIR 3 198 -64 469 292 111 5 chr2 171967994 171968225 -81288358 - MIR SINE MIR -6 256 1 957 303 0 8 chr2 171968372 171968626 -81287957 + MIR SINE MIR 11 262 0 26 50 0 0 chr2 171969848 171969888 -81286695 + AT_rich Low_complexity Low_complexity 1 40 0 574 323 109 13 chr2 171969911 171970378 -81286205 + L1M4 LINE L1 3852 4363 -1783 347 223 0 58 chr2 171970462 171970565 -81286018 + L1M4 LINE L1 4490 4586 -1560 1540 212 23 0 chr2 171970614 171970916 -81285667 + AluJo SINE Alu 1 309 -3 1293 159 0 5 chr2 171971101 171971308 -81285275 + MER2 DNA MER2_type 1 206 -139 229 205 0 0 chr2 171971446 171971485 -81285098 - Tigger7 DNA MER2_type 0 2487 2449 2069 109 10 23 chr2 171971556 171971859 -81284724 + AluSg SINE Alu 3 301 -9 21 0 0 0 chr2 171971892 171971913 -81284670 + AT_rich Low_complexity Low_complexity 1 21 0 364 348 22 7 chr2 171971967 171972102 -81284481 + HAL1 LINE L1 1 137 -2370 528 245 158 17 chr2 171972254 171972495 -81284088 + HAL1 LINE L1 1687 1961 -546 271 254 131 8 chr2 171972674 171972796 -81283787 + HAL1 LINE L1 2244 2380 -127 1411 156 39 35 chr2 171972877 171973189 -81283394 - AluJo SINE Alu 0 313 1 320 274 0 35 chr2 171974148 171974261 -81282322 + L1P LINE L1 4496 4604 -1542 4467 213 18 17 chr2 171974778 171976307 -81280276 - L1MA9 LINE L1 -39 6273 4744 459 202 137 77 chr2 171978239 171978339 -81278244 - MER5A DNA MER1_type -3 186 71 1816 124 37 33 chr2 171978339 171978638 -81277945 - AluSx SINE Alu -12 300 1 459 202 137 77 chr2 171978638 171978705 -81277878 - MER5A DNA MER1_type -118 71 9 1439 80 57 57 chr2 171978776 171979040 -81277543 + MER1B DNA MER1_type 1 264 -75 303 294 148 28 chr2 171979098 171979672 -81276911 - L1M4 LINE L1 -2521 3625 2983 24 67 0 0 chr2 171980144 171980189 -81276394 + AT_rich Low_complexity Low_complexity 1 45 0 2115 120 3 0 chr2 171980240 171980539 -81276044 + AluSc SINE Alu 1 300 -9 925 363 57 37 chr2 171980764 171981073 -81275510 + L2 LINE L2 1836 2137 -1177 2188 128 0 0 chr2 171981073 171981385 -81275198 - AluSx SINE Alu 0 312 1 925 363 57 37 chr2 171981385 171981884 -81274699 + L2 LINE L2 2137 2660 -654 196 244 278 0 chr2 171982036 171982126 -81274457 + MIR SINE MIR 72 186 -76 569 245 31 19 chr2 171982273 171982432 -81274151 - MIR SINE MIR -2 260 100 463 274 148 30 chr2 171982650 171982729 -81273854 - MIR SINE MIR -3 259 191 467 226 108 0 chr2 171982729 171982831 -81273752 + MER81 DNA DNA 2 114 0 463 274 148 30 chr2 171982831 171982981 -81273602 - MIR SINE MIR -71 191 3 527 299 72 0 chr2 171983113 171983280 -81273303 - MIR SINE MIR -66 196 18 1901 124 84 12 chr2 171984386 171984732 -81271851 + THE1C LTR MaLR 1 371 -4 2400 50 0 0 chr2 171984806 171985089 -81271494 + AluY SINE Alu 1 283 -28 200 296 54 36 chr2 171987611 171987731 -81268852 + MIR SINE MIR 48 141 -67 241 354 148 55 chr2 171987976 171988213 -81268370 + L2 LINE L2 3014 3272 0 26 0 0 0 chr2 171988277 171988303 -81268280 + AT_rich Low_complexity Low_complexity 1 26 0 2034 123 0 30 chr2 171988316 171988618 -81267965 - AluSx SINE Alu -17 295 3 198 0 0 0 chr2 171988967 171988989 -81267594 + (TTG)n Simple_repeat Simple_repeat 3 24 0 366 191 292 6 chr2 171990742 171990920 -81265663 - LTR16A1 LTR ERVL -12 445 217 222 37 0 0 chr2 171991691 171991718 -81264865 + (TG)n Simple_repeat Simple_repeat 2 28 0 32 57 0 0 chr2 171993146 171993199 -81263384 + AT_rich Low_complexity Low_complexity 1 53 0 4044 115 6 53 chr2 171994101 171994796 -81261787 + L1PA16 LINE L1 5496 6157 -9 2011 48 41 82 chr2 171994998 171995325 -81261258 - AluY SINE Alu 0 315 1 21 0 0 0 chr2 171995327 171995348 -81261235 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 171995863 171995892 -81260691 + AT_rich Low_complexity Low_complexity 1 29 0 220 286 36 0 chr2 171996085 171996141 -81260442 + L2 LINE L2 3244 3301 -12 255 351 76 62 chr2 171996190 171996611 -81259972 + L2 LINE L2 2421 2847 -467 1313 179 12 148 chr2 171996717 171996799 -81259784 + MLT1A1 LTR MaLR 1 93 -272 4084 43 2 4 chr2 171996799 171997306 -81259277 + L1PA5 LINE L1 5649 6154 0 1313 179 12 148 chr2 171997306 171997642 -81258941 + MLT1A1 LTR MaLR 93 362 -3 331 271 68 42 chr2 171998056 171998248 -81258335 + L2 LINE L2 3112 3308 -5 417 352 24 0 chr2 171998732 171998857 -81257726 - L2 LINE L2 -8 3264 3137 216 313 117 52 chr2 171999003 171999233 -81257350 + L2 LINE L2 1352 1596 -1718 503 302 70 38 chr2 171999716 172000057 -81256526 + MLT1K LTR MaLR 237 588 0 11739 170 53 6 chr2 172000085 172003164 -81253419 + L1PA13 LINE L1 3028 6144 -19 201 287 0 92 chr2 172004427 172004514 -81252069 + L2 LINE L2 3171 3249 -64 553 233 55 20 chr2 172004702 172004848 -81251735 + MER5B DNA MER1_type 28 178 0 21 36 0 0 chr2 172004997 172005025 -81251558 + AT_rich Low_complexity Low_complexity 1 28 0 224 343 7 71 chr2 172005213 172005353 -81251230 + L2 LINE L2 2923 3053 -219 213 323 39 47 chr2 172005490 172005617 -81250966 + L2 LINE L2 3147 3272 0 1760 141 15 61 chr2 172005666 172005993 -81250590 + AluJo SINE Alu 1 312 0 1326 224 16 52 chr2 172005999 172006387 -81250196 + MLT1A2 LTR MaLR 1 374 0 23 54 0 0 chr2 172006400 172006437 -81250146 + AT_rich Low_complexity Low_complexity 1 37 0 482 252 17 0 chr2 172008487 172008606 -81247977 - MIR SINE MIR -139 123 3 23 54 0 0 chr2 172010495 172010532 -81246051 + AT_rich Low_complexity Low_complexity 1 37 0 26 0 0 0 chr2 172010960 172010986 -81245597 + AT_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr2 172011403 172011426 -81245157 + AT_rich Low_complexity Low_complexity 1 23 0 1816 157 56 0 chr2 172011452 172011739 -81244844 + AluJb SINE Alu 1 303 -9 354 289 149 10 chr2 172011776 172011970 -81244613 - L1ME4a LINE L1 -38 6083 5863 563 282 40 27 chr2 172012053 172012276 -81244307 - MIR SINE MIR 0 262 30 1420 229 24 85 chr2 172012554 172012946 -81243637 + L1ME1 LINE L1 5664 6078 -88 633 193 92 0 chr2 172012946 172013065 -81243518 - FLAM_A SINE Alu -3 130 1 1420 229 24 85 chr2 172013065 172013145 -81243438 + L1ME1 LINE L1 6078 6103 -63 1999 142 3 0 chr2 172013145 172013441 -81243142 - AluJb SINE Alu -15 297 1 1420 229 24 85 chr2 172013441 172013499 -81243084 + L1ME1 LINE L1 6103 6163 -3 21 0 0 0 chr2 172013594 172013615 -81242968 + AT_rich Low_complexity Low_complexity 1 21 0 27 18 6 0 chr2 172013761 172013829 -81242754 + AT_rich Low_complexity Low_complexity 1 34 0 522 297 73 57 chr2 172014999 172015353 -81241230 - HAL1b LINE L1 -493 855 496 668 164 164 30 chr2 172016737 172016902 -81239681 + MER3 DNA MER1_type 15 201 -8 351 269 263 13 chr2 172017439 172017595 -81238988 + MIR SINE MIR 35 229 -33 1796 143 33 7 chr2 172017723 172017996 -81238587 + AluSx SINE Alu 1 280 -32 438 253 73 2 chr2 172018748 172018871 -81237712 - MIR SINE MIR -73 135 6 278 284 35 35 chr2 172019069 172019185 -81237398 - MIR SINE MIR -130 132 17 898 92 0 0 chr2 172019511 172019631 -81236952 + AluSg/x SINE Alu 187 306 -3 261 244 157 17 chr2 172019986 172020101 -81236482 - L2 LINE L2 -217 3096 2966 572 307 6 6 chr2 172020210 172020376 -81236207 + LTR33 LTR ERVL 33 198 -323 476 191 0 11 chr2 172020459 172020548 -81236035 - MLT1D LTR MaLR -416 89 2 414 294 40 51 chr2 172021274 172021451 -81235132 - MIR3 SINE MIR 0 208 34 2541 71 0 0 chr2 172021663 172021974 -81234609 + AluY SINE Alu 1 311 0 754 329 156 43 chr2 172022579 172022951 -81233632 + L2 LINE L2 1405 1734 -1580 2263 51 7 14 chr2 172022951 172023244 -81233339 - L1PA7 LINE L1 -3 6151 5861 754 329 156 43 chr2 172023244 172024045 -81232538 + L2 LINE L2 1734 2710 -604 240 289 26 13 chr2 172024612 172024688 -81231895 + L2 LINE L2 2698 2774 -540 283 375 48 57 chr2 172024899 172025214 -81231369 + L2 LINE L2 2845 3156 -116 2455 162 25 2 chr2 172028599 172029006 -81227577 - MSTB LTR MaLR -2 424 9 1458 147 0 121 chr2 172029009 172029356 -81227227 + AluY SINE Alu 1 305 -6 350 173 13 0 chr2 172029449 172029524 -81227059 + CT-rich Low_complexity Low_complexity 2 77 0 274 164 164 14 chr2 172029560 172029633 -81226950 - MLT1K LTR MaLR -2 586 503 200 170 19 0 chr2 172030264 172030317 -81226266 + (TA)n Simple_repeat Simple_repeat 2 55 0 2154 203 13 82 chr2 172030324 172030876 -81225707 - MLT2B3 LTR ERVL -40 514 1 187 283 38 0 chr2 172031129 172031182 -81225401 - L2 LINE L2 -482 2832 2778 2707 167 64 22 chr2 172031810 172032230 -81224353 - MER74A LTR ERVL 0 558 110 2300 89 3 19 chr2 172032230 172032546 -81224037 + AluSp SINE Alu 1 311 -2 2707 167 64 22 chr2 172032546 172032658 -81223925 - MER74A LTR ERVL -448 110 4 298 265 36 12 chr2 172034116 172034199 -81222384 - MIR3 SINE MIR -14 194 110 1719 179 49 6 chr2 172034284 172034613 -81221970 + MER2 DNA MER2_type 3 345 0 2199 98 0 3 chr2 172035198 172035484 -81221099 - AluSq SINE Alu -28 285 1 406 333 20 44 chr2 172035489 172035738 -81220845 - L1ME LINE L1 -532 5589 5347 262 259 36 0 chr2 172035749 172035861 -81220722 - L1ME LINE L1 -816 5330 5215 939 286 86 30 chr2 172035944 172036804 -81219779 + L1M4 LINE L1 3685 4592 -1554 251 98 131 0 chr2 172036990 172037051 -81219532 - MADE1 DNA Mariner -11 69 1 2324 207 76 28 chr2 172037111 172037519 -81219064 + MLT1F1 LTR MaLR 2 444 -123 2080 133 0 3 chr2 172037519 172037813 -81218770 + AluSx SINE Alu 1 293 -19 2324 207 76 28 chr2 172037813 172037944 -81218639 + MLT1F1 LTR MaLR 444 567 0 23 54 0 0 chr2 172037992 172038029 -81218554 + AT_rich Low_complexity Low_complexity 1 37 0 369 270 0 45 chr2 172039041 172039105 -81217478 - MER94 DNA DNA -14 120 62 2380 112 112 0 chr2 172039105 172039490 -81217093 - MSTA LTR MaLR 0 428 1 369 270 0 45 chr2 172039490 172039536 -81217047 - MER94 DNA DNA -72 62 15 458 271 96 23 chr2 172039687 172039864 -81216719 + MIR SINE MIR 7 196 -66 1317 131 44 12 chr2 172039870 172040122 -81216461 - L1MA5 LINE L1 -5 6295 6036 1693 148 111 100 chr2 172040139 172040599 -81215984 - MLT1C LTR MaLR -2 465 1 954 311 96 19 chr2 172040731 172041200 -81215383 + MLT1J LTR MaLR 7 511 0 4078 74 20 0 chr2 172041878 172042421 -81214162 + MER41A LTR ERV1 1 554 0 4209 151 9 28 chr2 172043748 172044489 -81212094 - LTR8A LTR ERV1 0 727 1 800 339 45 16 chr2 172045066 172045447 -81211136 + L3 LINE CR1 768 1159 -418 246 278 175 48 chr2 172045509 172045635 -81210948 + L3 LINE CR1 1362 1503 -74 1854 128 97 34 chr2 172046014 172046365 -81210218 - MER93b LTR ERV1 0 373 1 4978 111 48 5 chr2 172046599 172047347 -81209236 - LTR17 LTR ERV1 0 780 1 2220 111 53 17 chr2 172047397 172047758 -81208825 - THE1C LTR MaLR -1 374 1 378 0 0 0 chr2 172048791 172048833 -81207750 + (TG)n Simple_repeat Simple_repeat 2 43 0 2094 106 7 0 chr2 172050602 172050911 -81205672 - AluSx SINE Alu 0 311 1 2390 227 68 21 chr2 172050916 172051621 -81204962 - L1ME2 LINE L1 -37 6127 5390 225 235 0 20 chr2 172051654 172051705 -81204878 + L2 LINE L2 3256 3305 -8 234 305 79 89 chr2 172051753 172051943 -81204640 + L3b LINE CR1 1377 1564 -19 906 240 20 10 chr2 172053519 172053715 -81202868 + AluJo SINE Alu 87 284 -28 800 255 50 84 chr2 172054996 172055400 -81201183 - MLT1I LTR MaLR -2 407 18 1693 173 7 0 chr2 172055916 172056242 -81200341 + AluJb SINE Alu 1 328 0 237 241 0 0 chr2 172056390 172056448 -81200135 + MLT1I LTR MaLR 340 397 -12 396 152 6 5 chr2 172056525 172056697 -81199886 - AluJb SINE Alu -45 257 3 329 257 37 15 chr2 172056766 172056902 -81199681 - L1MC4 LINE L1 -2 8040 7902 500 265 36 22 chr2 172056964 172057187 -81199396 - L1MC4 LINE L1 -128 7914 7689 191 111 0 28 chr2 172057573 172057609 -81198974 + (TA)n Simple_repeat Simple_repeat 1 35 0 427 210 8 65 chr2 172057618 172057742 -81198841 - L1MC4 LINE L1 -492 7550 7434 247 208 0 26 chr2 172058280 172058357 -81198226 + CT-rich Low_complexity Low_complexity 2 76 0 264 212 0 0 chr2 172058797 172058863 -81197720 + CT-rich Low_complexity Low_complexity 1 66 0 250 290 0 16 chr2 172059419 172059481 -81197102 - L2 LINE L2 -8 3305 3245 323 291 26 0 chr2 172059585 172059673 -81196910 + MIR3 SINE MIR 73 163 -45 281 343 84 76 chr2 172059730 172060243 -81196340 + LTR33A LTR ERVL 3 519 -4 4627 78 20 20 chr2 172060435 172060636 -81195947 - PABL_B LTR ERV1 -28 639 439 2354 99 3 0 chr2 172060636 172060940 -81195643 - AluSp SINE Alu -8 305 1 4627 78 20 20 chr2 172060940 172061377 -81195206 - PABL_B LTR ERV1 -227 440 1 189 0 0 0 chr2 172061415 172061436 -81195147 + (TTA)n Simple_repeat Simple_repeat 1 21 0 2019 170 96 40 chr2 172062033 172062510 -81194073 - MLT1D LTR MaLR -1 504 1 375 302 76 64 chr2 172062866 172063309 -81193274 - L1MEc LINE L1 -3633 2582 2177 198 153 51 0 chr2 172063417 172063476 -81193107 + (TA)n Simple_repeat Simple_repeat 1 62 0 26 0 0 0 chr2 172063635 172063661 -81192922 + AT_rich Low_complexity Low_complexity 1 26 0 26 64 0 0 chr2 172063709 172063756 -81192827 + AT_rich Low_complexity Low_complexity 1 47 0 400 162 21 7 chr2 172063943 172064034 -81192549 - L1M4 LINE L1 -401 5777 5683 761 181 101 85 chr2 172067085 172067443 -81189140 + MSTD LTR MaLR 1 396 0 2239 115 3 3 chr2 172067988 172068300 -81188283 + AluSq SINE Alu 1 312 -1 1685 185 3 26 chr2 172068612 172068915 -81187668 + AluJo SINE Alu 1 296 -16 306 0 0 0 chr2 172069215 172069249 -81187334 + (TG)n Simple_repeat Simple_repeat 1 34 0 23 0 0 0 chr2 172069383 172069406 -81187177 + AT_rich Low_complexity Low_complexity 1 23 0 197 290 16 16 chr2 172070288 172070350 -81186233 - L2 LINE L2 0 3313 3252 198 91 0 0 chr2 172071469 172071502 -81185081 + (CAGAGA)n Simple_repeat Simple_repeat 2 34 0 1296 147 29 9 chr2 172071515 172071743 -81184840 - LTR9 LTR ERV1 -203 409 195 1514 90 5 9 chr2 172071748 172071970 -81184613 - pTR5 LTR ERV1 -2046 392 172 352 202 32 21 chr2 172071973 172072067 -81184516 - LTR30 LTR ERV1 -80 642 548 5132 130 151 26 chr2 172072072 172073132 -81183451 - pTR5 LTR ERV1 -509 1929 738 1021 127 28 33 chr2 172073157 172073338 -81183245 - LTR9 LTR ERV1 -432 180 1 1786 185 0 7 chr2 172073396 172073694 -81182889 + AluJo SINE Alu 1 296 -16 601 294 141 37 chr2 172074318 172074645 -81181938 + L2 LINE L2 2953 3313 0 2335 92 3 13 chr2 172074909 172075225 -81181358 - AluSp SINE Alu 0 313 1 324 333 146 6 chr2 172075620 172075785 -81180798 + MIR3 SINE MIR 14 201 -7 21 0 0 0 chr2 172076640 172076661 -81179922 + AT_rich Low_complexity Low_complexity 1 21 0 475 315 68 29 chr2 172077098 172077371 -81179212 - L1M4 LINE L1 -1818 4328 4067 2236 113 54 25 chr2 172077371 172077725 -81178858 - THE1B LTR MaLR 0 364 1 475 315 68 29 chr2 172077725 172077751 -81178832 - L1M4 LINE L1 -2079 4067 4043 1385 191 44 37 chr2 172077751 172078045 -81178538 - AluJo SINE Alu -16 296 1 475 315 68 29 chr2 172078045 172078357 -81178226 - L1M4 LINE L1 -2103 4043 3692 872 159 49 12 chr2 172079327 172079490 -81177093 + L1PA15 LINE L1 5991 6159 -6 7789 116 27 8 chr2 172079494 172080326 -81176257 - Tigger1 DNA MER2_type -111 2307 1445 2391 84 0 16 chr2 172080326 172080637 -81175946 - AluY SINE Alu -5 306 1 7789 116 27 8 chr2 172080637 172080989 -81175594 - Tigger1 DNA MER2_type -973 1445 1101 1633 159 56 47 chr2 172080990 172081079 -81175504 + MER2 DNA MER2_type 1 88 -256 2237 105 0 10 chr2 172081079 172081384 -81175199 + AluSq SINE Alu 1 302 -11 1633 159 56 47 chr2 172081384 172081634 -81174949 + MER2 DNA MER2_type 88 343 -1 248 242 91 0 chr2 172081655 172081721 -81174862 + MIR3 SINE MIR 120 191 -17 649 117 0 0 chr2 172082511 172082614 -81173969 - L1PA12 LINE L1 0 6168 6066 6039 156 55 19 chr2 172082626 172084599 -81171984 - L1PB1 LINE L1 -7 6144 4090 1587 188 12 9 chr2 172084596 172084931 -81171652 + L1PB1 LINE L1 3740 4075 -2071 * 5442 99 5 41 chr2 172084929 172085865 -81170718 - L1PA12 LINE L1 -85 6083 5175 405 0 0 0 chr2 172085865 172085910 -81170673 + (TA)n Simple_repeat Simple_repeat 2 46 0 5442 99 5 41 chr2 172085910 172085942 -81170641 - L1PA12 LINE L1 -993 5175 5143 24 53 0 0 chr2 172086156 172086194 -81170389 + AT_rich Low_complexity Low_complexity 1 38 0 929 199 6 11 chr2 172086202 172086378 -81170205 - FRAM SINE Alu -2 174 1 246 348 104 50 chr2 172086891 172087092 -81169491 + L2 LINE L2 2429 2640 -674 2084 170 47 8 chr2 172087175 172088139 -81168444 + L1M2 LINE L1 4255 5331 -981 180 0 0 0 chr2 172088139 172088159 -81168424 + (TAA)n Simple_repeat Simple_repeat 2 21 0 2084 170 47 8 chr2 172088159 172088495 -81168088 + L1M2 LINE L1 5331 5652 -660 * 2618 203 6 4 chr2 172088489 172089027 -81167556 + L1MA7 LINE L1 3550 4088 -2058 2871 162 56 26 chr2 172089032 172089150 -81167433 + L1MA7 LINE L1 5662 5775 -516 267 31 0 0 chr2 172089150 172089182 -81167401 + (CA)n Simple_repeat Simple_repeat 1 32 0 2871 162 56 26 chr2 172089182 172089673 -81166910 + L1MA7 LINE L1 5775 6289 -2 695 289 66 12 chr2 172089777 172090019 -81166564 + MIR SINE MIR 8 262 0 30 100 0 0 chr2 172090141 172090241 -81166342 + AT_rich Low_complexity Low_complexity 1 100 0 180 290 160 47 chr2 172091024 172091193 -81165390 + L2 LINE L2 2859 3046 -226 259 316 86 50 chr2 172091273 172091412 -81165171 + MIR SINE MIR 35 178 -84 1838 245 34 14 chr2 172091965 172092463 -81164120 - L1ME2 LINE L1 -8 6156 5649 * 1964 232 62 23 chr2 172092461 172093155 -81163428 + L1M4 LINE L1 2185 2905 -3241 378 0 0 0 chr2 172093157 172093199 -81163384 + (CA)n Simple_repeat Simple_repeat 1 42 0 185 335 140 30 chr2 172093562 172093798 -81162785 + L3b LINE CR1 1299 1560 -23 270 116 0 0 chr2 172093968 172094011 -81162572 + (TC)n Simple_repeat Simple_repeat 2 44 0 192 158 0 0 chr2 172094747 172094785 -81161798 + A-rich Low_complexity Low_complexity 1 38 0 886 238 26 87 chr2 172095628 172095972 -81160611 + L2 LINE L2 2985 3307 -6 2263 103 0 0 chr2 172096132 172096424 -81160159 - AluSg SINE Alu -18 292 1 232 360 12 0 chr2 172096454 172096540 -81160043 - MIR SINE MIR -156 106 20 21 0 0 0 chr2 172096783 172096804 -81159779 + AT_rich Low_complexity Low_complexity 1 21 0 1146 86 0 0 chr2 172097290 172097430 -81159153 + AluY SINE Alu 5 144 -167 241 31 0 0 chr2 172097430 172097462 -81159121 + Alu SINE Alu 260 291 -10 1237 229 49 24 chr2 172097697 172098025 -81158558 - MER93a LTR ERV1 0 402 67 206 287 23 69 chr2 172098136 172098223 -81158360 - L3 LINE CR1 -227 1350 1268 2052 160 21 24 chr2 172098634 172099010 -81157573 - THE1C LTR MaLR 0 375 1 1381 226 34 0 chr2 172099048 172099340 -81157243 + AluJb SINE Alu 1 302 0 306 143 0 0 chr2 172099356 172099419 -81157164 + (GGAA)n Simple_repeat Simple_repeat 3 65 0 436 316 37 0 chr2 172099444 172099580 -81157003 - MIR SINE MIR -121 141 1 31 26 0 0 chr2 172099938 172099976 -81156607 + AT_rich Low_complexity Low_complexity 1 38 0 2181 109 50 34 chr2 172100170 172100528 -81156055 + THE1B LTR MaLR 1 364 0 309 302 35 0 chr2 172100667 172100753 -81155830 - L2 LINE L2 -18 3295 3207 570 301 31 56 chr2 172100942 172101261 -81155322 + LTR16A1 LTR ERVL 147 457 0 25 31 0 0 chr2 172101289 172101321 -81155262 + AT_rich Low_complexity Low_complexity 1 32 0 1609 163 35 11 chr2 172101332 172101615 -81154968 + AluJo SINE Alu 1 290 -22 844 284 51 32 chr2 172101708 172102154 -81154429 - L2 LINE L2 -225 3088 2617 2070 264 128 50 chr2 172102154 172102984 -81153599 + MER45C DNA AcHobo 1 905 -676 604 236 8 0 chr2 172102984 172103107 -81153476 - FLAM_A SINE Alu -9 124 1 2070 264 128 50 chr2 172103107 172103159 -81153424 + MER45C DNA AcHobo 905 952 -1 770 265 10 10 chr2 172103160 172103356 -81153227 - L2 LINE L2 -690 2624 2429 183 328 103 34 chr2 172103615 172103819 -81152764 - L2 LINE L2 -944 2370 2153 339 96 0 0 chr2 172104436 172104488 -81152095 + (TC)n Simple_repeat Simple_repeat 1 52 0 2307 67 3 0 chr2 172104551 172104861 -81151722 - AluY SINE Alu 0 311 1 4204 147 18 40 chr2 172107352 172108079 -81148504 - MER50 LTR ERV1 -23 711 1 21 36 0 0 chr2 172108872 172108900 -81147683 + AT_rich Low_complexity Low_complexity 1 28 0 252 143 0 0 chr2 172109125 172109167 -81147416 + (TG)n Simple_repeat Simple_repeat 1 42 0 27 29 0 0 chr2 172109685 172109719 -81146864 + AT_rich Low_complexity Low_complexity 1 34 0 540 286 53 75 chr2 172110333 172110474 -81146109 + MIR SINE MIR 3 137 -125 1953 85 85 3 chr2 172110474 172110792 -81145791 - L1MA5A LINE L1 0 6297 5954 540 286 53 75 chr2 172110792 172110916 -81145667 + MIR SINE MIR 137 262 0 2192 99 3 7 chr2 172111424 172111727 -81144856 - AluSq SINE Alu -2 311 10 618 79 0 0 chr2 172111741 172111830 -81144753 + (TTCC)n Simple_repeat Simple_repeat 4 92 0 689 169 12 12 chr2 172111830 172112002 -81144581 + CT-rich Low_complexity Low_complexity 2 173 0 715 194 7 7 chr2 172112002 172112141 -81144442 - FRAM SINE Alu -38 138 1 470 278 140 81 chr2 172112194 172112637 -81143946 + MLT1K LTR MaLR 104 572 -16 1638 139 7 11 chr2 172112711 172112991 -81143592 - L1PA16 LINE L1 -2 6164 5886 462 262 129 25 chr2 172113116 172113318 -81143265 + MIR SINE MIR 22 244 -18 2023 149 20 9 chr2 172113698 172114040 -81142543 - MER7A DNA MER2_type -2 344 1 252 0 0 0 chr2 172114403 172114431 -81142152 + (A)n Simple_repeat Simple_repeat 1 28 0 25 0 0 0 chr2 172116836 172116861 -81139722 + AT_rich Low_complexity Low_complexity 1 25 0 2331 286 43 31 chr2 172120641 172121764 -81134819 - L2 LINE L2 0 3313 2170 381 300 96 43 chr2 172121818 172122048 -81134535 + MIR SINE MIR 7 248 -14 355 343 52 17 chr2 172122189 172122361 -81134222 - MIR3 SINE MIR -5 203 26 294 240 53 0 chr2 172123024 172123099 -81133484 - MIR SINE MIR -111 151 73 2550 46 0 0 chr2 172123661 172123965 -81132618 - AluY SINE Alu -7 304 1 25 51 0 0 chr2 172124310 172124349 -81132234 + AT_rich Low_complexity Low_complexity 1 39 0 1809 142 15 0 chr2 172124503 172124771 -81131812 - AluSx SINE Alu -27 285 14 284 365 24 0 chr2 172124900 172124985 -81131598 - L2 LINE L2 -45 3227 3141 1332 338 111 46 chr2 172125177 172126772 -81129811 - L2 LINE L2 -450 2864 1167 441 0 0 0 chr2 172126894 172126943 -81129640 + (TG)n Simple_repeat Simple_repeat 2 50 0 30 0 0 0 chr2 172127052 172127082 -81129501 + AT_rich Low_complexity Low_complexity 1 30 0 347 339 26 42 chr2 172127527 172127716 -81128867 - MIR SINE MIR -13 249 64 24 0 0 0 chr2 172131025 172131049 -81125534 + AT_rich Low_complexity Low_complexity 1 24 0 211 286 0 0 chr2 172131652 172131708 -81124875 + (TATG)n Simple_repeat Simple_repeat 4 59 0 363 266 276 5 chr2 172132889 172133088 -81123495 + MIR SINE MIR 7 259 -3 212 259 0 0 chr2 172135981 172136035 -81120548 + A-rich Low_complexity Low_complexity 2 55 0 21 0 0 0 chr2 172136181 172136202 -81120381 + AT_rich Low_complexity Low_complexity 1 21 0 214 224 112 84 chr2 172136953 172137096 -81119487 - MIR SINE MIR 0 262 116 266 180 16 0 chr2 172137746 172137807 -81118776 + GA-rich Low_complexity Low_complexity 4 65 0 239 264 11 0 chr2 172138272 172138363 -81118220 + GA-rich Low_complexity Low_complexity 1 92 0 2457 75 3 3 chr2 172139445 172139753 -81116830 + AluY SINE Alu 1 308 -3 1787 168 19 45 chr2 172139895 172140269 -81116314 - THE1B LTR MaLR 0 364 1 11898 91 2 2 chr2 172140269 172141850 -81114733 - THE1B-int LTR MaLR 0 1580 1 2041 136 19 45 chr2 172141850 172142224 -81114359 - THE1B LTR MaLR 0 364 1 810 291 173 3 chr2 172142330 172142701 -81113882 - MLT1K LTR MaLR -6 582 149 571 279 0 25 chr2 172145014 172145193 -81111390 - MIR SINE MIR -28 234 21 373 332 15 51 chr2 172145296 172145492 -81111091 + MER5A DNA MER1_type 1 189 0 22 56 0 0 chr2 172146317 172146353 -81110230 + AT_rich Low_complexity Low_complexity 1 36 0 449 308 114 14 chr2 172147944 172148155 -81108428 + MIR SINE MIR 21 252 -10 207 0 0 0 chr2 172149374 172149397 -81107186 + (T)n Simple_repeat Simple_repeat 1 23 0 21 36 0 0 chr2 172150960 172150988 -81105595 + AT_rich Low_complexity Low_complexity 1 28 0 35 41 0 0 chr2 172152427 172152476 -81104107 + AT_rich Low_complexity Low_complexity 1 49 0 267 293 24 55 chr2 172152757 172152921 -81103662 - MIR SINE MIR 0 262 104 245 341 22 0 chr2 172152997 172153088 -81103495 - L3 LINE CR1 -6 1571 1479 500 340 71 35 chr2 172153147 172153485 -81103098 - MLT1K LTR MaLR -38 550 201 8534 233 42 19 chr2 172153727 172157101 -81099482 + L1MB7 LINE L1 2674 6124 -60 381 307 48 6 chr2 172157100 172157266 -81099317 - L1MC/D LINE L1 -2006 5802 5630 * 1441 280 86 42 chr2 172157301 172158301 -81098282 + L1MEc LINE L1 810 1862 -4534 1683 136 38 0 chr2 172158301 172158566 -81098017 - L1PA15 LINE L1 -6 6159 5885 1441 280 86 42 chr2 172158566 172158636 -81097947 + L1MEc LINE L1 1862 1927 -4469 2331 70 0 3 chr2 172158649 172158947 -81097636 - AluY SINE Alu -14 297 1 2576 255 105 44 chr2 172158987 172159326 -81097257 + L1M4 LINE L1 3690 4007 -2139 2230 85 3 25 chr2 172159326 172159644 -81096939 + AluSq SINE Alu 1 311 -2 2576 255 105 44 chr2 172159644 172160643 -81095940 + L1M4 LINE L1 4007 5110 -1036 610 329 132 50 chr2 172160764 172161474 -81095109 - L2 LINE L2 -841 2473 1639 2496 56 0 0 chr2 172161474 172161780 -81094803 - AluY SINE Alu -5 306 1 610 329 132 50 chr2 172161780 172162177 -81094406 - L2 LINE L2 -1675 1639 1276 516 16 0 0 chr2 172164782 172164886 -81091697 + L1PA3 LINE L1 6091 6194 0 7090 89 13 4 chr2 172165797 172166832 -81089751 - L1P LINE L1 -3691 2455 1412 7059 57 5 0 chr2 172166833 172167984 -81088599 + L1PA7 LINE L1 4981 6146 -8 2005 151 0 0 chr2 172168464 172168763 -81087820 + AluSx SINE Alu 2 300 -12 2198 216 33 0 chr2 172168970 172169396 -81087187 - MLT1F1 LTR MaLR -44 523 84 195 42 0 0 chr2 172170637 172170661 -81085922 + (CA)n Simple_repeat Simple_repeat 2 25 0 419 154 210 5 chr2 172170666 172170861 -81085722 + L1MA8 LINE L1 5782 6016 -275 2985 140 0 0 chr2 172170966 172171424 -81085159 - L1PA15 LINE L1 -211 5954 5497 2297 133 19 68 chr2 172171420 172171848 -81084735 + L1P4 LINE L1 4876 5323 -845 * 255 31 0 0 chr2 172171848 172171880 -81084703 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2297 133 19 68 chr2 172171880 172172024 -81084559 + L1P4 LINE L1 5323 5428 -740 2004 114 3 0 chr2 172172024 172172368 -81084215 + AluSx SINE Alu 1 312 0 2297 133 19 68 chr2 172172368 172172418 -81084165 + L1P4 LINE L1 5428 5479 -689 545 220 42 0 chr2 172172418 172172536 -81084047 + Tigger1 DNA MER2_type 2296 2418 0 2159 110 3 7 chr2 172173554 172173863 -81082720 + AluSx SINE Alu 1 308 -4 22 70 0 0 chr2 172174734 172174777 -81081806 + AT_rich Low_complexity Low_complexity 1 43 0 437 339 102 18 chr2 172175335 172175774 -81080809 + L1 LINE L1 3558 4033 -2113 977 227 56 28 chr2 172176175 172176461 -81080122 - MER58B DNA MER1_type -3 338 45 1640 248 62 20 chr2 172176712 172177163 -81079420 + MER92B LTR ERV1 53 522 -114 28 0 0 0 chr2 172177322 172177350 -81079233 + AT_rich Low_complexity Low_complexity 1 28 0 614 295 51 0 chr2 172177819 172178036 -81078547 + MIR SINE MIR 31 258 -4 511 228 32 44 chr2 172178036 172178194 -81078389 - LTR33 LTR ERVL 0 521 366 28 29 0 0 chr2 172178839 172178874 -81077709 + AT_rich Low_complexity Low_complexity 1 35 0 354 80 0 0 chr2 172179319 172179369 -81077214 + (TG)n Simple_repeat Simple_repeat 1 50 0 296 302 103 8 chr2 172180636 172180762 -81075821 - L2 LINE L2 -12 3301 3164 5240 298 86 51 chr2 172181032 172183651 -81072932 - L2 LINE L2 -5 3308 616 395 248 159 0 chr2 172184079 172184192 -81072391 - MER94 DNA DNA -2 132 2 2521 112 5 5 chr2 172184328 172184703 -81071880 - THE1C LTR MaLR 0 375 1 1803 160 13 7 chr2 172185565 172185891 -81070692 - AluSx SINE Alu 0 312 5 2160 105 10 0 chr2 172186242 172186538 -81070045 - AluSx SINE Alu -13 299 1 233 284 80 45 chr2 172188034 172188122 -81068461 + L2 LINE L2 3155 3245 -27 324 70 0 0 chr2 172188683 172188726 -81067857 + (CA)n Simple_repeat Simple_repeat 2 44 0 186 319 35 78 chr2 172188822 172188938 -81067645 + MIR3 SINE MIR 59 169 -39 324 0 0 0 chr2 172189161 172189197 -81067386 + (CA)n Simple_repeat Simple_repeat 1 36 0 24 32 0 0 chr2 172192116 172192147 -81064436 + AT_rich Low_complexity Low_complexity 1 31 0 820 319 129 4 chr2 172192309 172192856 -81063727 + L2 LINE L2 2677 3289 -24 191 149 0 43 chr2 172193350 172193397 -81063186 + (CATA)n Simple_repeat Simple_repeat 2 46 0 556 291 148 9 chr2 172194192 172194402 -81062181 - MIR SINE MIR -3 259 21 245 167 19 0 chr2 172196236 172196290 -81060293 + (TA)n Simple_repeat Simple_repeat 1 55 0 260 300 161 0 chr2 172197664 172197794 -81058789 + L3 LINE CR1 1355 1505 -72 184 340 0 0 chr2 172197887 172197937 -81058646 - MIR SINE MIR -59 149 100 2610 186 76 10 chr2 172197938 172198418 -81058165 + MLT2B3 LTR ERVL 2 520 -34 845 45 9 0 chr2 172198418 172198528 -81058055 + (TCTA)n Simple_repeat Simple_repeat 2 112 0 2610 186 76 10 chr2 172198528 172198562 -81058021 + MLT2B3 LTR ERVL 520 550 -4 1882 69 120 14 chr2 172198592 172198867 -81057716 + AluY SINE Alu 1 304 -7 530 323 40 24 chr2 172199106 172199354 -81057229 + MLT1J2 LTR MaLR 5 256 -194 201 373 65 56 chr2 172200941 172201247 -81055336 + L2 LINE L2 2667 2975 -339 2003 75 3 150 chr2 172201502 172201862 -81054721 + AluSq SINE Alu 1 307 -6 189 284 190 17 chr2 172202255 172202371 -81054212 - L2 LINE L2 -7 3306 3171 1583 122 8 8 chr2 172203999 172204246 -81052337 - L1PA11 LINE L1 0 6174 5928 249 118 0 0 chr2 172204517 172204551 -81052032 - MSTA LTR MaLR -389 39 6 368 234 125 8 chr2 172204551 172204679 -81051904 + MIR SINE MIR 80 222 -40 180 214 0 0 chr2 172205057 172205113 -81051470 + (CA)n Simple_repeat Simple_repeat 2 57 0 2255 119 3 0 chr2 172205165 172205476 -81051107 + AluSx SINE Alu 1 312 0 2146 148 55 33 chr2 172205533 172205952 -81050631 + MSTA LTR MaLR 1 428 0 966 153 0 7 chr2 172205962 172206112 -81050471 + MLT1A1 LTR MaLR 1 149 -216 2596 188 12 35 chr2 172206113 172206683 -81049900 + L1MB8 LINE L1 5621 6177 -1 235 292 68 42 chr2 172206762 172206998 -81049585 - L2 LINE L2 -1234 2080 1839 546 305 39 117 chr2 172208154 172208751 -81047832 + MLT1K LTR MaLR 39 588 0 214 195 37 37 chr2 172209427 172209509 -81047074 + (TA)n Simple_repeat Simple_repeat 1 82 0 6746 65 18 1 chr2 172210793 172211999 -81044584 + L1PA8 LINE L1 4942 6163 -9 21 36 0 0 chr2 172212103 172212131 -81044452 + AT_rich Low_complexity Low_complexity 1 28 0 1191 330 41 11 chr2 172212131 172212671 -81043912 + MLT1K LTR MaLR 25 580 -8 343 315 70 14 chr2 172212944 172213087 -81043496 + L2 LINE L2 3122 3272 0 26 0 0 0 chr2 172214857 172214883 -81041700 + AT_rich Low_complexity Low_complexity 1 26 0 431 232 106 32 chr2 172214896 172215180 -81041403 - L1MC5 LINE L1 -48 7913 7609 561 283 64 17 chr2 172215619 172215792 -81040791 - MIR SINE MIR -10 252 72 244 174 14 14 chr2 172216555 172216624 -81039959 + CT-rich Low_complexity Low_complexity 1 69 0 355 360 50 18 chr2 172216832 172217115 -81039468 + L2 LINE L2 2245 2536 -778 713 228 25 103 chr2 172217883 172218203 -81038380 + L2 LINE L2 3019 3313 0 22 0 0 0 chr2 172219050 172219072 -81037511 + AT_rich Low_complexity Low_complexity 1 22 0 1527 271 97 24 chr2 172220715 172220928 -81035655 - L1ME3A LINE L1 -14 6156 5960 1397 191 26 43 chr2 172220928 172221231 -81035352 - AluJo SINE Alu -12 300 3 1527 271 97 24 chr2 172221231 172221689 -81034894 - L1ME3A LINE L1 -210 5960 5436 2397 98 3 62 chr2 172222796 172223183 -81033400 - THE1B LTR MaLR 0 364 1 544 141 174 16 chr2 172223219 172223340 -81033243 + MIR SINE MIR 123 262 0 1309 215 82 77 chr2 172223500 172223965 -81032618 + MLT1C LTR MaLR 1 467 0 22 0 0 0 chr2 172225448 172225470 -81031113 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr2 172225915 172225937 -81030646 + (A)n Simple_repeat Simple_repeat 1 22 0 24 91 0 0 chr2 172226649 172226715 -81029868 + AT_rich Low_complexity Low_complexity 1 66 0 247 435 21 10 chr2 172227787 172227980 -81028603 + MIR3 SINE MIR 7 201 -7 403 274 96 0 chr2 172228202 172228337 -81028246 + MIR SINE MIR 84 231 -31 24 32 0 0 chr2 172230245 172230276 -81026307 + AT_rich Low_complexity Low_complexity 1 31 0 265 311 17 34 chr2 172231117 172231236 -81025347 - MER102a DNA MER1_type -9 321 205 595 263 17 23 chr2 172232343 172232518 -81024065 + MER5B DNA MER1_type 2 175 -3 383 133 67 0 chr2 172234361 172234436 -81022147 + L1MC2 LINE L1 6259 6338 -6 368 223 50 29 chr2 172236717 172236856 -81019727 - Charlie5 DNA MER1_type 0 2623 2482 293 207 17 0 chr2 172236871 172236929 -81019654 - Charlie5 DNA MER1_type -2548 64 6 530 299 109 11 chr2 172237320 172237494 -81019089 + MIR SINE MIR 71 261 -1 786 296 105 36 chr2 172237946 172238596 -81017987 - L2 LINE L2 0 3313 2615 708 176 127 18 chr2 172238814 172238979 -81017604 + MER5A DNA MER1_type 7 189 0 28 0 0 0 chr2 172239058 172239086 -81017497 + AT_rich Low_complexity Low_complexity 1 28 0 331 176 16 0 chr2 172239223 172239348 -81017235 + (TA)n Simple_repeat Simple_repeat 1 127 0 452 297 5 72 chr2 172240857 172241011 -81015572 + MER5A DNA MER1_type 7 147 -42 2282 77 0 53 chr2 172241011 172241334 -81015249 - AluSg SINE Alu -4 306 1 452 297 5 72 chr2 172241334 172241374 -81015209 + MER5A DNA MER1_type 147 188 -1 246 266 195 19 chr2 172242053 172242207 -81014376 - L2 LINE L2 -463 2851 2671 229 233 68 0 chr2 172242725 172242798 -81013785 + GA-rich Low_complexity Low_complexity 2 79 0 2320 88 3 0 chr2 172243545 172243851 -81012732 - AluY SINE Alu -3 308 2 23 0 0 0 chr2 172243931 172243954 -81012629 + AT_rich Low_complexity Low_complexity 1 23 0 497 338 47 20 chr2 172244189 172244485 -81012098 - MLT1L LTR MaLR -136 479 176 258 32 0 0 chr2 172245328 172245359 -81011224 + (T)n Simple_repeat Simple_repeat 1 31 0 526 303 25 19 chr2 172245394 172245556 -81011027 + MIR SINE MIR 100 262 0 1051 151 18 0 chr2 172246844 172247010 -81009573 - FRAM SINE Alu -6 170 2 449 311 161 8 chr2 172247032 172247286 -81009297 + L2 LINE L2 2235 2527 -787 507 276 124 29 chr2 172247338 172247548 -81009035 - MIR SINE MIR -13 249 20 5666 200 76 16 chr2 172247626 172248999 -81007584 + Charlie1a DNA MER1_type 1 1455 0 310 289 66 144 chr2 172249117 172249618 -81006965 + L2 LINE L2 2809 3270 -2 32 81 0 0 chr2 172249824 172249898 -81006685 + AT_rich Low_complexity Low_complexity 1 74 0 1862 134 3 14 chr2 172251313 172251605 -81004978 + AluJb SINE Alu 1 289 -23 22 0 0 0 chr2 172251605 172251627 -81004956 + AT_rich Low_complexity Low_complexity 1 22 0 796 282 62 4 chr2 172252360 172252601 -81003982 - MIR SINE MIR -1 261 7 318 294 7 68 chr2 172252605 172252751 -81003832 + L3 LINE CR1 1222 1358 -219 318 161 0 119 chr2 172253068 172253186 -81003397 - L1MA7 LINE L1 -2 6289 6186 304 229 286 7 chr2 172254780 172254920 -81001663 - MER5A DNA MER1_type -1 188 10 895 199 0 0 chr2 172255635 172255791 -81000792 + FRAM SINE Alu 1 156 -20 859 234 87 0 chr2 172256322 172256553 -81000030 - MIR SINE MIR 0 262 12 486 266 162 13 chr2 172258237 172258391 -80998192 - MER5B DNA MER1_type -1 177 1 218 293 24 24 chr2 172258432 172258514 -80998069 + L3 LINE CR1 1489 1570 -7 267 175 0 0 chr2 172259826 172259883 -80996700 + CT-rich Low_complexity Low_complexity 3 59 0 21 36 0 0 chr2 172260243 172260271 -80996312 + AT_rich Low_complexity Low_complexity 1 28 0 1647 107 0 4 chr2 172262715 172262940 -80993643 + AluSg/x SINE Alu 74 297 -15 22 0 0 0 chr2 172263308 172263330 -80993253 + AT_rich Low_complexity Low_complexity 1 22 0 260 250 0 16 chr2 172264534 172264598 -80991985 + (CA)n Simple_repeat Simple_repeat 2 64 0 22 0 0 0 chr2 172264758 172264780 -80991803 + AT_rich Low_complexity Low_complexity 1 22 0 522 205 108 12 chr2 172264813 172265031 -80991552 + Charlie5 DNA MER1_type 2 2624 0 727 294 21 13 chr2 172268401 172268639 -80987944 + MIR SINE MIR 12 251 -11 375 141 0 0 chr2 172268675 172268739 -80987844 + (A)n Simple_repeat Simple_repeat 1 64 0 805 211 56 0 chr2 172268741 172268902 -80987681 + AluJo SINE Alu 120 289 -23 1743 155 3 14 chr2 172268903 172269194 -80987389 + AluSx SINE Alu 1 288 -24 25 0 0 0 chr2 172269194 172269219 -80987364 + AT_rich Low_complexity Low_complexity 1 25 0 1328 116 5 20 chr2 172269400 172269599 -80986984 - Charlie3 DNA MER1_type -4 2706 2511 502 118 0 13 chr2 172269599 172269675 -80986908 - AluS SINE Alu -238 75 1 2363 58 7 0 chr2 172269688 172269982 -80986601 - AluY SINE Alu -3 308 13 9697 166 117 39 chr2 172270023 172270182 -80986401 + L1MC3 LINE L1 5110 5255 -2530 1591 182 3 24 chr2 172270182 172270500 -80986083 + AluJb SINE Alu 1 312 0 9697 166 117 39 chr2 172270500 172272634 -80983949 + L1MC3 LINE L1 5255 7584 -201 2407 84 0 0 chr2 172272634 172272942 -80983641 + AluY SINE Alu 1 308 -3 9697 166 117 39 chr2 172272942 172272992 -80983591 + L1MC3 LINE L1 7584 7629 -156 704 157 9 0 chr2 172272992 172273107 -80983476 + FLAM_C SINE Alu 1 116 -27 260 244 58 0 chr2 172273141 172273227 -80983356 + L1MC3 LINE L1 7695 7785 0 23 0 0 29 chr2 172273284 172273301 -80983282 + AT_rich Low_complexity Low_complexity 1 17 -16 1607 174 3 22 chr2 172273301 172273618 -80982965 - AluY SINE Alu 0 311 1 23 0 0 29 chr2 172273618 172273634 -80982949 + AT_rich Low_complexity Low_complexity 17 33 0 1770 178 3 0 chr2 172274143 172274435 -80982148 + AluJb SINE Alu 1 293 -19 335 89 38 38 chr2 172274436 172274515 -80982068 + GA-rich Low_complexity Low_complexity 1 79 0 23 0 0 0 chr2 172275662 172275685 -80980898 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr2 172275834 172275855 -80980728 + (A)n Simple_repeat Simple_repeat 1 21 0 1601 233 99 26 chr2 172276088 172276892 -80979691 - L1ME LINE L1 -636 5597 4713 1238 39 7 0 chr2 172276916 172277069 -80979514 - L1PA5 LINE L1 -7 6147 5994 2407 25 0 0 chr2 172277069 172277346 -80979237 + L1P2 LINE L1 5454 5730 -424 3082 256 86 22 chr2 172277374 172278430 -80978153 - L1ME LINE L1 -5237 1159 36 26 0 0 0 chr2 172278892 172278918 -80977665 + AT_rich Low_complexity Low_complexity 1 26 0 2280 95 3 0 chr2 172280369 172280664 -80975919 + AluSx SINE Alu 1 296 -16 22 56 0 0 chr2 172281302 172281338 -80975245 + AT_rich Low_complexity Low_complexity 1 36 0 302 308 206 0 chr2 172281680 172281787 -80974796 - L2 LINE L2 -5 3267 3139 21 0 0 0 chr2 172282152 172282173 -80974410 + AT_rich Low_complexity Low_complexity 1 21 0 348 245 19 0 chr2 172283316 172283475 -80973108 + (TA)n Simple_repeat Simple_repeat 1 162 0 284 276 211 7 chr2 172284602 172284754 -80971829 + MIR SINE MIR 5 187 -75 1162 309 71 19 chr2 172284948 172285424 -80971159 - L2 LINE L2 0 3313 2813 21 57 0 0 chr2 172285807 172285842 -80970741 + AT_rich Low_complexity Low_complexity 1 35 0 343 352 28 22 chr2 172286600 172286782 -80969801 + MER5A DNA MER1_type 2 184 -5 1880 144 0 3 chr2 172286792 172287120 -80969463 + AluSx SINE Alu 1 327 0 197 0 0 67 chr2 172287658 172287688 -80968895 + (TATATG)n Simple_repeat Simple_repeat 2 29 0 23 0 0 0 chr2 172287979 172288002 -80968581 + AT_rich Low_complexity Low_complexity 1 23 0 27 0 0 0 chr2 172288766 172288793 -80967790 + AT_rich Low_complexity Low_complexity 1 27 0 23 0 0 0 chr2 172291378 172291401 -80965182 + AT_rich Low_complexity Low_complexity 1 23 0 190 243 29 43 chr2 172293022 172293092 -80963491 + L2 LINE L2 1950 2018 -1296 552 271 60 40 chr2 172293194 172293435 -80963148 + MIR SINE MIR 4 248 -14 456 316 36 41 chr2 172293659 172293855 -80962728 + MIR3 SINE MIR 10 204 -4 22 0 0 0 chr2 172294841 172294863 -80961720 + AT_rich Low_complexity Low_complexity 1 22 0 1767 138 57 20 chr2 172296200 172296496 -80960087 + AluSx SINE Alu 1 307 -5 8303 29 0 0 chr2 172296500 172297815 -80958768 - L1PA3 LINE L1 -452 5703 4389 3371 50 0 0 chr2 172297815 172298224 -80958359 + L1PA3 LINE L1 5721 6136 -19 30 45 0 0 chr2 172298242 172298286 -80958297 + AT_rich Low_complexity Low_complexity 1 44 0 37 0 0 0 chr2 172298664 172298701 -80957882 + AT_rich Low_complexity Low_complexity 1 37 0 263 321 95 22 chr2 172300004 172300141 -80956442 + MIR SINE MIR 46 192 -70 22 0 0 0 chr2 172300886 172300908 -80955675 + AT_rich Low_complexity Low_complexity 1 22 0 204 40 0 0 chr2 172301024 172301049 -80955534 + (CA)n Simple_repeat Simple_repeat 2 26 0 231 36 0 0 chr2 172301389 172301417 -80955166 + (TC)n Simple_repeat Simple_repeat 1 28 0 231 274 0 20 chr2 172301596 172301647 -80954936 + L2 LINE L2 3255 3304 -9 1778 161 3 10 chr2 172302483 172302775 -80953808 + AluJb SINE Alu 1 290 -22 704 178 7 14 chr2 172303164 172303457 -80953126 + GA-rich Low_complexity Low_complexity 1 291 0 205 379 0 0 chr2 172304053 172304119 -80952464 - L2 LINE L2 -3 3269 3204 2203 78 0 45 chr2 172304227 172304535 -80952048 + AluY SINE Alu 1 294 -17 24 0 0 0 chr2 172305748 172305772 -80950811 + AT_rich Low_complexity Low_complexity 1 24 0 218 180 40 0 chr2 172306508 172306558 -80950025 + (TA)n Simple_repeat Simple_repeat 1 52 0 351 113 0 0 chr2 172307584 172307637 -80948946 + (A)n Simple_repeat Simple_repeat 1 53 0 1657 179 0 63 chr2 172310633 172310777 -80945806 + AluJb SINE Alu 1 116 -196 2392 77 0 0 chr2 172310777 172311077 -80945506 + AluY SINE Alu 1 300 -11 1657 179 0 63 chr2 172311077 172311251 -80945332 + AluJb SINE Alu 116 299 -13 29 47 0 0 chr2 172312026 172312069 -80944514 + AT_rich Low_complexity Low_complexity 1 43 0 227 221 0 13 chr2 172312296 172312373 -80944210 + (TATATG)n Simple_repeat Simple_repeat 4 79 0 186 43 0 0 chr2 172312999 172313022 -80943561 + (A)n Simple_repeat Simple_repeat 1 23 0 1118 206 31 76 chr2 172314604 172314895 -80941688 + AluJo SINE Alu 6 283 -29 35 41 0 0 chr2 172314895 172314944 -80941639 + AT_rich Low_complexity Low_complexity 1 49 0 26 64 0 0 chr2 172315947 172315994 -80940589 + AT_rich Low_complexity Low_complexity 1 47 0 341 368 76 18 chr2 172318224 172318395 -80938188 - MIR3 SINE MIR -25 183 3 423 0 0 0 chr2 172318435 172318482 -80938101 + (TG)n Simple_repeat Simple_repeat 2 48 0 2306 81 3 3 chr2 172318618 172318913 -80937670 - AluSq SINE Alu -17 296 2 435 327 105 40 chr2 172319646 172320102 -80936481 - L2 LINE L2 0 3313 2828 1467 261 146 68 chr2 172320232 172321041 -80935542 - L2 LINE L2 -596 2718 1847 26 0 0 0 chr2 172321266 172321292 -80935291 + AT_rich Low_complexity Low_complexity 1 26 0 853 299 30 0 chr2 172321842 172322076 -80934507 - MIR SINE MIR -17 245 5 187 277 134 27 chr2 172322116 172322228 -80934355 - MIR SINE MIR -75 187 64 21 36 0 0 chr2 172322638 172322666 -80933917 + AT_rich Low_complexity Low_complexity 1 28 0 293 298 187 23 chr2 172322759 172323112 -80933471 + L2 LINE L2 2239 2649 -665 409 257 129 0 chr2 172323255 172323395 -80933188 - MIR SINE MIR 0 262 105 259 298 53 0 chr2 172323827 172323921 -80932662 - L1MC/D LINE L1 -2013 5795 5697 950 188 0 0 chr2 172324088 172324248 -80932335 - FRAM SINE Alu -15 161 2 401 286 139 41 chr2 172324786 172325125 -80931458 - HAL1 LINE L1 -2112 395 24 653 280 125 72 chr2 172325160 172325831 -80930752 - L1MC/D LINE L1 -826 5320 4614 181 395 42 25 chr2 172326564 172326683 -80929900 + MIR3 SINE MIR 3 123 -85 1608 173 3 36 chr2 172327430 172327736 -80928847 - AluJo SINE Alu -14 298 3 865 178 19 13 chr2 172328251 172328408 -80928175 + MER105 DNA DNA 27 184 -20 243 342 52 32 chr2 172328432 172328587 -80927996 + MIR SINE MIR 16 173 -89 857 161 136 0 chr2 172328735 172328890 -80927693 - MER46A DNA MER2_type -60 176 1 228 300 271 14 chr2 172329759 172329899 -80926684 - MIR3 SINE MIR -3 205 30 189 94 0 0 chr2 172330217 172330249 -80926334 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2318 50 4 0 chr2 172330251 172330530 -80926053 - AluY SINE Alu -31 280 1 1369 86 0 11 chr2 172331267 172331454 -80925129 - MER107 DNA MER1_type 0 197 13 240 307 102 11 chr2 172335080 172335168 -80921415 + L2 LINE L2 3172 3267 -5 285 267 23 0 chr2 172336160 172336255 -80920328 - MIR SINE MIR -76 132 36 1666 172 27 7 chr2 172336895 172337192 -80919391 - AluJo SINE Alu -9 303 1 22 35 0 0 chr2 172341180 172341209 -80915374 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr2 172341879 172341904 -80914679 + AT_rich Low_complexity Low_complexity 1 25 0 2346 100 0 6 chr2 172342797 172343108 -80913475 + AluSg SINE Alu 1 309 -1 22 35 0 0 chr2 172343278 172343307 -80913276 + AT_rich Low_complexity Low_complexity 1 29 0 307 330 58 40 chr2 172343417 172343590 -80912993 + MIR3 SINE MIR 21 196 -12 423 161 0 0 chr2 172344148 172344229 -80912354 + AluS SINE Alu 232 312 0 35 24 0 0 chr2 172344267 172344309 -80912274 + AT_rich Low_complexity Low_complexity 1 42 0 480 72 0 0 chr2 172344394 172344463 -80912120 + (TAGA)n Simple_repeat Simple_repeat 3 71 0 339 291 25 15 chr2 172344822 172345018 -80911565 + L1M4 LINE L1 3587 3784 -2362 2701 271 57 29 chr2 172345029 172345978 -80910605 + L1M4b LINE L1 12 1225 -5634 4318 102 22 28 chr2 172346231 172346899 -80909684 - MER4A LTR ERV1 0 664 1 342 269 7 87 chr2 172347101 172347250 -80909333 + L1M4b LINE L1 1205 1341 -5518 * 1983 265 54 13 chr2 172347234 172347939 -80908644 + L1M4b LINE L1 1620 2353 -4606 1539 151 11 14 chr2 172348036 172348320 -80908263 - L1MA8 LINE L1 -20 6271 5989 344 326 111 22 chr2 172348774 172348955 -80907628 + MIR SINE MIR 1 197 -65 2299 153 47 2 chr2 172348982 172349387 -80907196 - MSTB LTR MaLR -3 423 1 1681 174 7 3 chr2 172350240 172350533 -80906050 - AluJo SINE Alu -18 294 1 379 296 60 16 chr2 172350910 172351132 -80905451 + MLT1K LTR MaLR 13 245 -343 1549 249 54 39 chr2 172351205 172351671 -80904912 + MER74B LTR ERVL 56 528 -94 286 143 20 0 chr2 172351927 172351976 -80904607 + MLT1K LTR MaLR 506 555 -33 833 168 34 50 chr2 172352243 172352422 -80904161 + MLT1B LTR MaLR 215 390 0 815 292 50 30 chr2 172352811 172353208 -80903375 + MLT1I LTR MaLR 2 406 -3 320 287 116 37 chr2 172353689 172353957 -80902626 - L1M4 LINE L1 -1125 5021 4733 846 184 30 4 chr2 172353987 172354162 -80902421 + LTR8A LTR ERV1 1 157 -384 7514 181 94 21 chr2 172354165 172355718 -80900865 - MER52A LTR ERV1 0 1755 5 1980 189 29 90 chr2 172355715 172356271 -80900312 + LTR8 LTR ERV1 170 691 0 * 2687 275 95 49 chr2 172356283 172358015 -80898568 - L1M4 LINE L1 -1453 4693 3041 1375 174 35 90 chr2 172358015 172358326 -80898257 + AluJo SINE Alu 1 294 -18 2687 275 95 49 chr2 172358326 172358342 -80898241 - L1M4 LINE L1 -3105 3041 3027 2474 287 48 32 chr2 172358342 172359053 -80897530 + MER72 LTR ERV1 1 722 0 2687 275 95 49 chr2 172359053 172359418 -80897165 - L1M4 LINE L1 -3119 3027 2483 233 268 0 14 chr2 172359691 172359762 -80896821 - MLT2F LTR ERVL -593 70 1 2694 185 16 101 chr2 172359959 172360028 -80896555 + LTR8 LTR ERV1 1 74 -617 1921 141 3 10 chr2 172360028 172360332 -80896251 - AluSx SINE Alu -8 304 3 2694 185 16 101 chr2 172360332 172361017 -80895566 + LTR8 LTR ERV1 74 691 0 27 0 0 0 chr2 172361119 172361146 -80895437 + AT_rich Low_complexity Low_complexity 1 27 0 211 211 0 39 chr2 172363180 172363232 -80893351 + CT-rich Low_complexity Low_complexity 1 50 0 384 22 0 0 chr2 172363387 172363432 -80893151 + (CA)n Simple_repeat Simple_repeat 1 45 0 325 301 27 30 chr2 172363805 172364072 -80892511 + CT-rich Low_complexity Low_complexity 1 266 0 266 260 10 0 chr2 172364142 172364242 -80892341 + CT-rich Low_complexity Low_complexity 5 105 0 355 257 114 50 chr2 172364786 172364988 -80891595 - MIR SINE MIR 0 262 48 1470 198 18 3 chr2 172365024 172365307 -80891276 + AluJb SINE Alu 3 289 -23 351 299 79 8 chr2 172365720 172365847 -80890736 - L2 LINE L2 -14 3299 3164 2022 145 42 24 chr2 172366334 172366665 -80889918 + MER1B DNA MER1_type 1 337 0 513 276 86 21 chr2 172367030 172367273 -80889310 - MIR SINE MIR -3 259 1 2217 105 7 0 chr2 172367325 172367619 -80888964 + AluSg SINE Alu 1 296 -14 3026 118 22 0 chr2 172367999 172368413 -80888170 + LTR46 LTR ERV1 1 427 -33 441 0 0 0 chr2 172368413 172368462 -80888121 + (TG)n Simple_repeat Simple_repeat 2 50 0 3026 118 22 0 chr2 172368462 172368496 -80888087 + LTR46 LTR ERV1 427 459 -1 881 122 0 7 chr2 172368509 172368657 -80887926 + (TTC)n Simple_repeat Simple_repeat 2 148 0 2154 110 0 0 chr2 172368659 172368941 -80887642 - AluSq SINE Alu -31 282 1 384 282 27 74 chr2 172370408 172370557 -80886026 - MIR SINE MIR -38 224 83 512 285 82 43 chr2 172370561 172370974 -80885609 + MLT1H1 LTR MaLR 1 415 -175 25 31 0 0 chr2 172371091 172371123 -80885460 + AT_rich Low_complexity Low_complexity 1 32 0 618 92 0 0 chr2 172371184 172371271 -80885312 - L1PA11 LINE L1 0 6174 6088 6324 191 35 21 chr2 172371410 172372096 -80884487 + Charlie1a DNA MER1_type 1 676 -2085 1634 141 63 19 chr2 172372096 172372394 -80884189 + AluJb SINE Alu 1 310 0 6324 191 35 21 chr2 172372394 172373141 -80883442 + Charlie1a DNA MER1_type 676 1455 0 2098 176 97 103 chr2 172373260 172373958 -80882625 - LTR8A LTR ERV1 0 727 34 11280 236 18 26 chr2 172375036 172376638 -80879945 - L1MC1 LINE L1 -6 6396 4782 1540 122 36 0 chr2 172376638 172376860 -80879723 - MER30 DNA MER1_type 0 230 1 11280 236 18 26 chr2 172376860 172380439 -80876144 - L1MC1 LINE L1 -1620 4782 1313 1055 218 56 48 chr2 172380445 172380697 -80875886 + AluJo SINE Alu 35 288 -24 2484 67 0 0 chr2 172381020 172381319 -80875264 + AluY SINE Alu 1 299 -12 194 222 89 0 chr2 172381753 172381798 -80874785 - L2 LINE L2 -3 3310 3262 250 217 67 0 chr2 172381885 172381945 -80874638 - MLT1K LTR MaLR -15 573 510 2845 7 0 0 chr2 172382287 172382595 -80873988 + AluY SINE Alu 1 308 -3 260 271 73 10 chr2 172383598 172383694 -80872889 + MIR SINE MIR 161 262 0 17885 138 39 17 chr2 172384236 172387249 -80869334 + L1PA3 LINE L1 3 3119 -3743 20334 28 5 0 chr2 172387249 172390460 -80866123 + L1PA3 LINE L1 3655 6871 0 17885 138 39 17 chr2 172390460 172391234 -80865349 + L1PA3 LINE L1 3119 3874 -2988 3122 158 25 1 chr2 172391277 172392695 -80863888 + L1PB1 LINE L1 4613 6150 -1 25 0 0 0 chr2 172392711 172392736 -80863847 + AT_rich Low_complexity Low_complexity 1 25 0 23 54 0 0 chr2 172392988 172393025 -80863558 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr2 172393098 172393119 -80863464 + AT_rich Low_complexity Low_complexity 1 21 0 196 246 277 15 chr2 172394220 172394285 -80862298 - L2 LINE L2 -26 3287 3206 589 269 63 6 chr2 172394650 172394825 -80861758 + MIR SINE MIR 3 187 -75 2277 206 25 37 chr2 172394846 172395408 -80861175 + MER74A LTR ERVL 2 556 -2 1855 112 34 78 chr2 172395430 172395625 -80860958 - AluSx SINE Alu -4 308 131 315 0 0 0 chr2 172395625 172395660 -80860923 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1855 112 34 78 chr2 172395660 172395786 -80860797 - AluSx SINE Alu -181 131 1 197 203 68 17 chr2 172395789 172395848 -80860735 + MIR SINE MIR 183 244 -18 328 254 82 41 chr2 172395920 172396042 -80860541 - L2 LINE L2 0 3313 3187 181 100 33 0 chr2 172396815 172396845 -80859738 - L2 LINE L2 -1 3271 3241 204 322 158 15 chr2 172397610 172397812 -80858771 + L2 LINE L2 2825 3055 -217 195 290 43 29 chr2 172397920 172397989 -80858594 + L2 LINE L2 3198 3267 -5 2546 64 0 6 chr2 172398193 172398506 -80858077 + AluY SINE Alu 1 311 0 2139 112 29 52 chr2 172399159 172399543 -80857040 - THE1C LTR MaLR 0 375 1 225 269 160 26 chr2 172399873 172400029 -80856554 - MER117 DNA MER1_type -19 178 2 408 148 49 0 chr2 172400990 172401071 -80855512 + MER33 DNA MER1_type 1 85 -239 507 332 82 9 chr2 172401470 172401702 -80854881 + MIR SINE MIR 8 256 -6 1804 177 49 0 chr2 172402475 172402819 -80853764 + MER46B DNA MER2_type 1 236 0 2051 165 80 12 chr2 172403408 172403809 -80852774 - MSTA LTR MaLR 0 428 1 23 0 0 0 chr2 172404868 172404891 -80851692 + AT_rich Low_complexity Low_complexity 1 23 0 1870 100 0 8 chr2 172405702 172405953 -80850630 + AluSg SINE Alu 50 298 -12 22 0 0 0 chr2 172407040 172407062 -80849521 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr2 172407317 172407346 -80849237 + AT_rich Low_complexity Low_complexity 1 29 0 27 0 0 0 chr2 172410038 172410065 -80846518 + AT_rich Low_complexity Low_complexity 1 27 0 190 261 261 0 chr2 172412013 172412082 -80844501 - L2 LINE L2 0 3313 3227 180 111 0 0 chr2 172413109 172413136 -80843447 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 25 51 0 0 chr2 172413911 172413950 -80842633 + AT_rich Low_complexity Low_complexity 1 39 0 26 50 0 0 chr2 172415021 172415061 -80841522 + AT_rich Low_complexity Low_complexity 1 40 0 324 127 25 25 chr2 172415266 172415345 -80841238 + (TCTA)n Simple_repeat Simple_repeat 1 79 0 225 316 60 34 chr2 172416173 172416290 -80840293 + L2 LINE L2 3185 3304 -9 375 269 101 57 chr2 172416310 172416396 -80840187 + L1ME4a LINE L1 5676 5757 -364 1871 113 67 14 chr2 172416396 172416679 -80839904 + AluSx SINE Alu 1 298 -14 375 269 101 57 chr2 172416679 172416819 -80839764 + L1ME4a LINE L1 5757 5912 -209 22 0 0 0 chr2 172416959 172416981 -80839602 + AT_rich Low_complexity Low_complexity 1 22 0 1872 204 112 86 chr2 172417644 172418449 -80838134 - LTR1B LTR ERV1 0 826 1 204 333 21 21 chr2 172418458 172418554 -80838029 + L2 LINE L2 3195 3290 -23 1663 162 14 11 chr2 172418870 172419174 -80837409 - AluSx SINE Alu 0 305 1 246 289 13 40 chr2 172420258 172420334 -80836249 + L2 LINE L2 3219 3292 -21 225 247 71 0 chr2 172420963 172421048 -80835535 + L1ME4a LINE L1 5979 6069 -52 184 347 99 47 chr2 172421508 172421851 -80834732 - L2 LINE L2 -355 2959 2599 275 323 0 10 chr2 172421950 172422046 -80834537 - L3b LINE CR1 -202 1381 1287 22 35 0 0 chr2 172422298 172422327 -80834256 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 172422410 172422432 -80834151 + AT_rich Low_complexity Low_complexity 1 22 0 606 252 103 7 chr2 172422935 172423090 -80833493 + MER5A DNA MER1_type 20 189 0 2181 142 18 0 chr2 172424976 172425314 -80831269 + L1MA8 LINE L1 5433 5776 -515 216 0 0 0 chr2 172425314 172425338 -80831245 + (TG)n Simple_repeat Simple_repeat 2 25 0 201 237 0 0 chr2 172425340 172425399 -80831184 + (TA)n Simple_repeat Simple_repeat 2 60 0 252 247 68 0 chr2 172425402 172425475 -80831108 + L1MC4 LINE L1 6615 6692 -1350 195 42 0 0 chr2 172425760 172425784 -80830799 + (CA)n Simple_repeat Simple_repeat 2 25 0 2556 137 43 8 chr2 172425789 172426278 -80830305 + L1MA8 LINE L1 5782 6287 -4 195 42 0 0 chr2 172426645 172426669 -80829914 + (TG)n Simple_repeat Simple_repeat 2 25 0 271 268 159 7 chr2 172428389 172428527 -80828056 - MIR SINE MIR 0 262 104 999 283 91 45 chr2 172428735 172429319 -80827264 + L1ME3A LINE L1 5344 5954 -208 278 289 155 37 chr2 172429381 172429568 -80827015 + L1ME3A LINE L1 5962 6170 0 322 247 52 21 chr2 172429647 172429744 -80826839 + MER112 DNA MER1_type 140 239 -21 513 187 53 29 chr2 172430030 172430164 -80826419 - MIR SINE MIR -21 241 105 21 104 0 0 chr2 172431303 172431380 -80825203 + AT_rich Low_complexity Low_complexity 1 77 0 218 408 130 7 chr2 172433295 172433741 -80822842 - L2 LINE L2 -418 2896 2396 614 249 34 15 chr2 172435408 172435613 -80820970 - L1MD3 LINE L1 -19 7976 7768 2258 108 0 7 chr2 172436089 172436394 -80820189 + AluSg SINE Alu 1 303 -7 222 308 77 22 chr2 172436395 172436486 -80820097 + MIR SINE MIR 19 114 -94 355 313 57 88 chr2 172437796 172437982 -80818601 + MIR SINE MIR 46 252 -10 192 306 0 20 chr2 172438038 172438087 -80818496 - MIR SINE MIR -194 68 21 225 178 0 0 chr2 172440508 172440553 -80816030 + L1MC4 LINE L1 6659 6703 -1339 221 191 0 21 chr2 172441934 172441981 -80814602 + T-rich Low_complexity Low_complexity 1 46 0 377 273 27 96 chr2 172442602 172442789 -80813794 + MER5B DNA MER1_type 2 175 -3 306 293 0 38 chr2 172443357 172443463 -80813120 + G-rich Low_complexity Low_complexity 4 105 0 1669 178 0 41 chr2 172443590 172443921 -80812662 - AluJo SINE Alu 0 322 4 192 158 0 0 chr2 172444598 172444636 -80811947 + CT-rich Low_complexity Low_complexity 4 41 0 233 296 64 8 chr2 172444936 172445061 -80811522 - L1MEc LINE L1 -4640 1756 1625 359 161 43 0 chr2 172445077 172445238 -80811345 + (TA)n Simple_repeat Simple_repeat 1 168 0 44 35 0 0 chr2 172445238 172445296 -80811287 + AT_rich Low_complexity Low_complexity 1 58 0 353 269 56 62 chr2 172445388 172445548 -80811035 - L1MEc LINE L1 -4916 1289 1131 1183 255 85 22 chr2 172445553 172446059 -80810524 - L1M4 LINE L1 -2471 3675 3138 * 2422 285 92 35 chr2 172446045 172447890 -80808693 - L1MEc LINE L1 -1951 4264 2315 306 0 0 0 chr2 172447951 172447985 -80808598 + (CA)n Simple_repeat Simple_repeat 1 34 0 1666 102 81 73 chr2 172448277 172448345 -80808238 - THE1C LTR MaLR 0 375 309 1925 151 7 0 chr2 172448345 172448649 -80807934 - AluSq SINE Alu -7 306 1 1666 102 81 73 chr2 172448649 172448952 -80807631 - THE1C LTR MaLR -66 309 1 316 309 62 21 chr2 172449013 172449207 -80807376 - L1MEc LINE L1 -4653 1743 1542 399 221 0 18 chr2 172449231 172449344 -80807239 - LTR37A LTR ERV1 -27 399 289 2384 198 63 18 chr2 172450470 172450845 -80805738 + L1MB5 LINE L1 5579 5989 -185 1625 187 30 3 chr2 172450845 172451144 -80805439 + AluJb SINE Alu 1 307 -5 2384 198 63 18 chr2 172451144 172451325 -80805258 + L1MB5 LINE L1 5989 6160 -14 988 241 109 18 chr2 172452628 172453131 -80803452 - MLT1E1 LTR MaLR -2 591 55 369 0 0 0 chr2 172453646 172453687 -80802896 + (CA)n Simple_repeat Simple_repeat 2 42 0 225 275 62 25 chr2 172454594 172454674 -80801909 + L2 LINE L2 3174 3256 -16 29 90 0 0 chr2 172456948 172457026 -80799557 + AT_rich Low_complexity Low_complexity 1 78 0 488 264 148 11 chr2 172457043 172457225 -80799358 - MIR SINE MIR -34 228 22 1438 182 0 26 chr2 172457724 172457988 -80798595 + AluJb SINE Alu 11 267 -45 1852 122 7 0 chr2 172458989 172459267 -80797316 + THE1-int LTR MaLR 940 1219 -361 848 104 37 15 chr2 172459267 172459401 -80797182 + THE1B LTR MaLR 5 141 -223 1041 167 11 53 chr2 172459412 172459675 -80796908 + THE1B LTR MaLR 113 364 0 1467 139 0 9 chr2 172459675 172459891 -80796692 + AluSg/x SINE Alu 97 310 0 378 121 0 0 chr2 172460584 172460650 -80795933 + (TC)n Simple_repeat Simple_repeat 2 67 0 2906 0 0 0 chr2 172460913 172461224 -80795359 + AluYa5 SINE Alu 1 311 0 30 27 0 0 chr2 172461417 172461454 -80795129 + AT_rich Low_complexity Low_complexity 1 37 0 240 213 50 62 chr2 172463081 172463161 -80793422 - MER68 LTR ERV1 0 562 484 * 690 233 40 67 chr2 172463160 172463383 -80793200 - MER68 LTR ERV1 -345 217 1 23 0 0 0 chr2 172463412 172463435 -80793148 + AT_rich Low_complexity Low_complexity 1 23 0 419 35 18 0 chr2 172463496 172463553 -80793030 + (TCTA)n Simple_repeat Simple_repeat 3 60 0 185 83 28 0 chr2 172463702 172463738 -80792845 + (TAAAAA)n Simple_repeat Simple_repeat 4 40 0 2231 126 14 0 chr2 172463762 172464111 -80792472 - L1PB1 LINE L1 -5 6862 6509 195 42 0 0 chr2 172464111 172464135 -80792448 + (TG)n Simple_repeat Simple_repeat 2 25 0 198 191 0 0 chr2 172464137 172464179 -80792404 + (CA)n Simple_repeat Simple_repeat 2 43 0 451 170 75 0 chr2 172464242 172464336 -80792247 + MER68 LTR ERV1 117 217 -345 5065 176 7 18 chr2 172464369 172466045 -80790538 - L1PB1 LINE L1 -360 6507 4854 * 6493 149 11 9 chr2 172466036 172467191 -80789392 - L1PB1 LINE L1 -4682 2181 1025 3356 144 35 39 chr2 172467192 172467886 -80788697 - L1PB1 LINE L1 -6170 693 3 237 190 103 17 chr2 172468931 172468989 -80787594 - MER81 DNA DNA -30 84 22 255 257 81 22 chr2 172469081 172469217 -80787366 - L1ME LINE L1 -443 5678 5535 22 35 0 0 chr2 172469604 172469633 -80786950 + AT_rich Low_complexity Low_complexity 1 29 0 1897 156 3 3 chr2 172469695 172469983 -80786600 - AluSx SINE Alu -24 288 1 785 287 16 10 chr2 172470092 172470395 -80786188 + L1MC4a LINE L1 5545 5849 -1959 25 31 0 0 chr2 172470960 172470992 -80785591 + AT_rich Low_complexity Low_complexity 1 32 0 296 215 161 54 chr2 172471645 172471782 -80784801 + Charlie7 DNA MER1_type 390 511 -2101 2495 136 14 28 chr2 172471782 172472216 -80784367 - MSTA LTR MaLR 0 428 1 9189 173 18 9 chr2 172472216 172473853 -80782730 - MSTA-int LTR MaLR 0 1651 1 2386 153 14 34 chr2 172473853 172474290 -80782293 - MSTA LTR MaLR 0 428 1 296 215 161 54 chr2 172474290 172474336 -80782247 + Charlie7 DNA MER1_type 510 595 -2017 289 291 55 4 chr2 172475607 172475727 -80780856 + MER21B LTR ERV1 24 196 -409 830 257 76 53 chr2 172475757 172476306 -80780277 + MER77 LTR ERV1 141 598 -7 915 222 22 0 chr2 172476383 172476568 -80780015 + MER5A DNA MER1_type 1 189 0 5875 190 133 13 chr2 172476594 172478017 -80778566 + MER52A LTR ERV1 1 1755 0 4551 179 55 24 chr2 172478120 172479229 -80777354 - Charlie1a DNA MER1_type 0 1455 313 4189 25 0 0 chr2 172479243 172479861 -80776722 - L1PA3 LINE L1 -665 5490 4873 5767 17 0 0 chr2 172479862 172480515 -80776068 + L1PA3 LINE L1 5503 6155 0 1477 214 0 19 chr2 172480535 172480801 -80775782 - AluJo SINE Alu -30 282 22 406 123 0 0 chr2 172480832 172480897 -80775686 - L1PA8 LINE L1 -9 6163 6099 533 94 12 0 chr2 172480917 172481002 -80775581 + (TC)n Simple_repeat Simple_repeat 1 86 0 1058 212 12 24 chr2 172481002 172481252 -80775331 - Charlie1a DNA MER1_type -1208 247 1 222 358 67 8 chr2 172481270 172481404 -80775179 + L2 LINE L2 3172 3313 0 310 352 86 52 chr2 172482003 172482330 -80774253 + L2 LINE L2 2924 3261 -11 220 223 213 64 chr2 172482683 172482777 -80773806 + MER5A DNA MER1_type 9 116 -73 1612 153 141 6 chr2 172483465 172483792 -80772791 + MSTA LTR MaLR 58 428 0 216 0 0 0 chr2 172483883 172483907 -80772676 + (TTG)n Simple_repeat Simple_repeat 2 25 0 818 140 7 0 chr2 172483922 172484058 -80772525 - MER72 LTR ERV1 0 722 586 14716 148 48 58 chr2 172484058 172487299 -80769284 - MER4B-int LTR ERV1 -706 6052 2729 1145 181 60 91 chr2 172487266 172487337 -80769246 - MER4B-int LTR ERV1 -3538 1585 1513 * 2288 67 0 7 chr2 172487337 172487648 -80768935 - AluY SINE Alu 0 309 1 1145 181 60 91 chr2 172487648 172488092 -80768491 - MER4B-int LTR ERV1 -3610 1513 1190 461 167 98 10 chr2 172488290 172488392 -80768191 - MLT1A2 LTR MaLR -5 369 259 1922 158 3 22 chr2 172488392 172488709 -80767874 + AluSx SINE Alu 1 311 -1 756 204 234 0 chr2 172488749 172489014 -80767569 - Charlie7 DNA MER1_type -513 2099 1773 572 251 216 40 chr2 172489013 172489467 -80767116 - Charlie7 DNA MER1_type -2036 576 43 * 198 229 119 51 chr2 172489491 172489609 -80766974 - MER5A DNA MER1_type -21 168 43 198 325 87 32 chr2 172489501 172489627 -80766956 + MER5A DNA MER1_type 44 176 -13 318 308 77 44 chr2 172489645 172489827 -80766756 + MER5A DNA MER1_type 2 189 0 620 169 186 0 chr2 172489941 172490065 -80766518 + MER5A DNA MER1_type 3 149 -40 1784 164 3 14 chr2 172491132 172491419 -80765164 + AluJo SINE Alu 6 289 -23 472 152 0 25 chr2 172491419 172491498 -80765085 + FLAM SINE Alu 51 127 -16 29 0 0 0 chr2 172491498 172491527 -80765056 + AT_rich Low_complexity Low_complexity 1 29 0 184 146 21 21 chr2 172492395 172492443 -80764140 + (TA)n Simple_repeat Simple_repeat 2 49 0 927 117 0 41 chr2 172492577 172492722 -80763861 + FLAM_C SINE Alu 3 141 -2 647 205 98 29 chr2 172493146 172493351 -80763232 - Charlie8 DNA MER1_type -2160 257 39 217 286 43 29 chr2 172493391 172493461 -80763122 - MIR3 SINE MIR -51 157 87 13460 135 43 22 chr2 172494017 172496384 -80760199 + Tigger1 DNA MER2_type 2 2418 0 212 364 26 0 chr2 172496631 172496708 -80759875 - MER5B DNA MER1_type -31 147 69 318 275 158 23 chr2 172498323 172498494 -80758089 + MIR SINE MIR 25 218 -44 390 291 57 14 chr2 172498720 172498930 -80757653 - L1ME LINE L1 -356 5765 5547 315 0 0 0 chr2 172500597 172500632 -80755951 + (CA)n Simple_repeat Simple_repeat 2 36 0 343 257 83 9 chr2 172501221 172501330 -80755253 + MIR SINE MIR 96 212 -50 545 158 9 9 chr2 172502282 172502396 -80754187 + CT-rich Low_complexity Low_complexity 3 116 0 25 0 0 0 chr2 172502775 172502800 -80753783 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr2 172504209 172504231 -80752352 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr2 172506035 172506065 -80750518 + AT_rich Low_complexity Low_complexity 1 30 0 423 314 68 28 chr2 172506359 172506713 -80749870 + L1MEd LINE L1 976 1343 -4862 23 0 0 0 chr2 172506721 172506744 -80749839 + AT_rich Low_complexity Low_complexity 1 23 0 230 320 10 10 chr2 172506798 172506898 -80749685 + L1MEd LINE L1 1676 1775 -4621 1649 187 0 0 chr2 172507176 172507443 -80749140 + AluJb SINE Alu 1 267 -45 245 192 0 0 chr2 172507483 172507535 -80749048 + A-rich Low_complexity Low_complexity 1 52 0 429 282 26 39 chr2 172507599 172507755 -80748828 + L1MC5 LINE L1 5483 5636 -2172 * 737 233 163 60 chr2 172507747 172508347 -80748236 + L1MC5 LINE L1 7005 7666 -295 5022 169 29 24 chr2 172508370 172510082 -80746501 - L1PA16 LINE L1 -7 6159 4457 188 358 28 18 chr2 172510301 172510410 -80746173 - MER5A DNA MER1_type -44 145 36 25 51 0 0 chr2 172510450 172510489 -80746094 + AT_rich Low_complexity Low_complexity 1 39 0 632 183 51 15 chr2 172510912 172511049 -80745534 - FLAM_C SINE Alu -1 142 1 24 32 0 0 chr2 172511103 172511134 -80745449 + AT_rich Low_complexity Low_complexity 1 31 0 1922 142 10 0 chr2 172511324 172511613 -80744970 - AluSx SINE Alu -20 292 1 22 35 0 0 chr2 172512115 172512144 -80744439 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 172512181 172512203 -80744380 + AT_rich Low_complexity Low_complexity 1 22 0 437 271 0 0 chr2 172514062 172514169 -80742414 + FLAM_A SINE Alu 18 124 -18 421 241 53 70 chr2 172514373 172514560 -80742023 + L2 LINE L2 3122 3305 -8 22 35 0 0 chr2 172515333 172515362 -80741221 + AT_rich Low_complexity Low_complexity 1 29 0 261 276 60 22 chr2 172515734 172515868 -80740715 + L2 LINE L2 1793 1931 -1383 336 210 280 21 chr2 172515871 172516014 -80740569 - MER5A DNA MER1_type 0 189 10 201 341 48 36 chr2 172516048 172516215 -80740368 + L2 LINE L2 1991 2159 -1155 468 302 8 16 chr2 172516224 172516353 -80740230 - MER5A DNA MER1_type -3 186 59 22 35 0 0 chr2 172516373 172516402 -80740181 + AT_rich Low_complexity Low_complexity 1 29 0 3734 191 34 23 chr2 172516466 172517493 -80739090 - L1MA9 LINE L1 -60 6252 5254 236 344 143 22 chr2 172517494 172517718 -80738865 + L2 LINE L2 2176 2426 -888 387 278 87 46 chr2 172517784 172517957 -80738626 - MER5A DNA MER1_type -9 180 1 188 83 0 28 chr2 172520699 172520735 -80735848 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 26 0 0 0 chr2 172522114 172522140 -80734443 + AT_rich Low_complexity Low_complexity 1 26 0 23 33 0 0 chr2 172522279 172522309 -80734274 + AT_rich Low_complexity Low_complexity 1 30 0 31 44 0 0 chr2 172523930 172523975 -80732608 + AT_rich Low_complexity Low_complexity 1 45 0 769 233 6 17 chr2 172523975 172524151 -80732432 - FAM SINE Alu -1 174 1 211 231 0 0 chr2 172524309 172524348 -80732235 - MIR SINE MIR -116 146 108 252 330 119 9 chr2 172525280 172525389 -80731194 + L2 LINE L2 3150 3270 -2 209 359 13 0 chr2 172525402 172525480 -80731103 - L3 LINE CR1 -91 1486 1408 465 294 115 32 chr2 172526447 172526665 -80729918 + MIR SINE MIR 3 238 -24 2150 106 10 0 chr2 172527142 172527272 -80729311 + AluSx SINE Alu 1 128 -184 310 56 19 19 chr2 172527272 172527326 -80729257 + (TA)n Simple_repeat Simple_repeat 2 55 0 2150 106 10 0 chr2 172527326 172527487 -80729096 + AluSx SINE Alu 128 295 -17 1736 188 7 0 chr2 172527500 172527878 -80728705 + AluSx SINE Alu 1 380 0 406 365 66 8 chr2 172528513 172528757 -80727826 + MIR SINE MIR 4 261 -1 595 269 48 27 chr2 172529150 172529336 -80727247 + MIR SINE MIR 14 203 -59 1997 211 57 61 chr2 172529336 172529441 -80727142 - MLT1E3 LTR MaLR 0 624 520 1577 156 11 4 chr2 172529441 172529704 -80726879 + AluJo SINE Alu 34 298 -14 1997 211 57 61 chr2 172529704 172530268 -80726315 - MLT1E3 LTR MaLR -104 520 1 304 210 16 0 chr2 172530269 172530331 -80726252 + MIR SINE MIR 200 262 0 328 233 216 26 chr2 172530435 172530551 -80726032 + L1ME LINE L1 5541 5678 -443 303 104 78 0 chr2 172530552 172530667 -80725916 + (TA)n Simple_repeat Simple_repeat 1 124 0 803 169 0 40 chr2 172530672 172530820 -80725763 + FLAM_C SINE Alu 1 142 -1 244 230 53 115 chr2 172530841 172531050 -80725533 + L1ME LINE L1 5712 5907 -214 1620 181 10 0 chr2 172531600 172531904 -80724679 + L1PA16 LINE L1 5858 6164 -2 374 213 40 0 chr2 172531908 172531983 -80724600 - MIR SINE MIR -95 167 90 1632 130 3 39 chr2 172532071 172532378 -80724205 - AluSx SINE Alu -14 298 3 269 216 11 0 chr2 172532833 172532921 -80723662 + (TA)n Simple_repeat Simple_repeat 1 89 0 1500 168 78 56 chr2 172533395 172533752 -80722831 - MLT1A1 LTR MaLR 0 365 1 1638 131 71 11 chr2 172533918 172534186 -80722397 - AluSx SINE Alu -7 305 22 216 200 0 0 chr2 172534697 172534757 -80721826 + CT-rich Low_complexity Low_complexity 2 61 0 780 163 8 0 chr2 172534828 172534957 -80721626 - MLT1A1 LTR MaLR 0 365 236 42278 32 23 2 chr2 172535749 172541774 -80714809 + L1PA2 LINE L1 4 6155 0 469 269 49 149 chr2 172541956 172542664 -80713919 + L2 LINE L2 2602 3313 0 248 295 134 69 chr2 172543871 172544088 -80712495 + Charlie8 DNA MER1_type 181 411 -2006 631 100 10 30 chr2 172546371 172546471 -80710112 + L1PA6 LINE L1 6051 6148 -6 181 302 54 39 chr2 172546824 172546953 -80709630 + L2 LINE L2 3142 3272 0 458 282 26 56 chr2 172548116 172548311 -80708272 - MIR3 SINE MIR -11 197 9 285 146 0 0 chr2 172550799 172550847 -80705736 + (TA)n Simple_repeat Simple_repeat 2 49 0 228 152 0 0 chr2 172550851 172550897 -80705686 - LTR66 LTR ERVL -171 439 394 180 0 0 0 chr2 172550914 172550934 -80705649 + (TA)n Simple_repeat Simple_repeat 1 20 0 2104 102 0 27 chr2 172550934 172551228 -80705355 - AluSx SINE Alu -26 286 1 302 229 0 14 chr2 172552038 172552108 -80704475 - MIR SINE MIR -15 247 179 241 259 222 15 chr2 172552991 172553126 -80703457 - L1ME LINE L1 -466 5655 5493 243 125 0 0 chr2 172553207 172553247 -80703336 + (TC)n Simple_repeat Simple_repeat 2 41 0 240 220 0 17 chr2 172553251 172553310 -80703273 + (CATA)n Simple_repeat Simple_repeat 2 59 0 210 71 0 0 chr2 172553402 172553430 -80703153 + (TG)n Simple_repeat Simple_repeat 1 28 0 518 262 24 97 chr2 172554770 172554976 -80701607 - MIR SINE MIR -71 191 1 27 0 0 0 chr2 172556161 172556188 -80700395 + AT_rich Low_complexity Low_complexity 1 27 0 388 281 57 31 chr2 172556372 172556564 -80700019 - MLT1K LTR MaLR 0 588 392 744 298 44 79 chr2 172556749 172557260 -80699323 + LTR33A LTR ERVL 46 521 -2 246 304 14 0 chr2 172557262 172557331 -80699252 - MLT1K LTR MaLR -351 237 168 189 241 172 0 chr2 172557732 172557790 -80698793 - MIR SINE MIR -114 148 81 426 291 55 111 chr2 172558967 172559545 -80697038 - L1MC4a LINE L1 -236 5928 5508 589 268 86 26 chr2 172559579 172560042 -80696541 - L2 LINE L2 -86 3227 2469 3317 255 28 17 chr2 172560061 172561074 -80695509 - L1MC3 LINE L1 -1 7784 6761 3251 301 54 28 chr2 172561199 172562561 -80694022 - L2 LINE L2 -962 2352 955 2097 88 7 10 chr2 172563292 172563587 -80692996 + AluSc SINE Alu 1 294 -15 282 73 0 0 chr2 172565172 172565213 -80691370 + (TCC)n Simple_repeat Simple_repeat 3 43 0 455 211 0 11 chr2 172565228 172565318 -80691265 - FLAM_A SINE Alu -52 90 2 2131 90 7 23 chr2 172565505 172565804 -80690779 + AluSg SINE Alu 1 294 -16 2098 143 0 0 chr2 172566396 172566704 -80689879 - AluSx SINE Alu -4 308 1 764 227 39 5 chr2 172566986 172567193 -80689390 + L1MA8 LINE L1 6068 6281 -10 23 54 0 0 chr2 172567959 172567996 -80688587 + AT_rich Low_complexity Low_complexity 1 37 0 194 277 0 0 chr2 172569405 172569452 -80687131 - MIR SINE MIR -12 250 204 619 269 14 33 chr2 172570241 172570453 -80686130 - L2 LINE L2 -6 3307 3100 189 0 0 0 chr2 172571289 172571310 -80685273 + (TCTA)n Simple_repeat Simple_repeat 2 22 0 642 83 25 0 chr2 172571313 172571433 -80685150 + (TA)n Simple_repeat Simple_repeat 1 123 0 1141 180 24 24 chr2 172571433 172571644 -80684939 - AluJb SINE Alu -17 295 85 917 209 52 38 chr2 172572281 172572491 -80684092 - MER20 DNA MER1_type 0 219 7 1741 159 0 31 chr2 172572609 172572923 -80683660 + AluJb SINE Alu 1 305 0 344 349 120 47 chr2 172573207 172573957 -80682626 + L2 LINE L2 1277 2081 -1233 265 216 36 16 chr2 172573976 172574058 -80682525 - Charlie8 DNA MER1_type -7 2410 240 40 37 0 0 chr2 172574574 172574628 -80681955 + AT_rich Low_complexity Low_complexity 1 54 0 3027 231 60 24 chr2 172574728 172575734 -80680849 - L1ME1 LINE L1 -18 6148 5072 2118 128 3 3 chr2 172575734 172576046 -80680537 - AluSx SINE Alu 0 312 1 3027 231 60 24 chr2 172576046 172576545 -80680038 - L1ME1 LINE L1 -1094 5072 4592 225 290 75 36 chr2 172576840 172577023 -80679560 + MIR SINE MIR 1 261 -1 747 296 35 18 chr2 172577027 172577447 -80679136 + L1ME4a LINE L1 5489 5914 -207 2291 98 3 0 chr2 172577459 172577764 -80678819 - AluY SINE Alu -5 306 1 417 137 21 11 chr2 172578160 172578255 -80678328 + GA-rich Low_complexity Low_complexity 2 97 0 2724 205 27 18 chr2 172578354 172579017 -80677566 - L1 LINE L1 -755 5391 4723 1649 195 16 24 chr2 172579017 172579386 -80677197 + MER52A LTR ERV1 1 366 -1389 297 167 0 0 chr2 172579386 172579434 -80677149 + L1P4 LINE L1 5423 5470 -691 * 612 45 11 11 chr2 172579426 172579515 -80677068 + THE1A-int LTR MaLR 1492 1580 0 1537 156 101 15 chr2 172579515 172579842 -80676741 + THE1A LTR MaLR 1 355 0 181 346 167 0 chr2 172579968 172580046 -80676537 + L2 LINE L2 3147 3237 -35 1082 42 0 28 chr2 172581740 172581882 -80674701 - L1PA4 LINE L1 -229 5926 5789 * 11657 24 0 0 chr2 172581881 172583273 -80673310 + L1P LINE L1 3051 4442 -1704 236 338 14 0 chr2 172584433 172584504 -80672079 + Charlie8 DNA MER1_type 1 72 -2345 506 304 111 26 chr2 172584650 172585002 -80671581 + L1MC4a LINE L1 5506 5887 -1921 23 68 0 0 chr2 172585040 172585084 -80671499 + AT_rich Low_complexity Low_complexity 1 44 0 203 184 82 20 chr2 172588129 172588178 -80668405 - L2 LINE L2 0 3313 3262 24 0 0 0 chr2 172588511 172588535 -80668048 + AT_rich Low_complexity Low_complexity 1 24 0 229 281 0 0 chr2 172592652 172592709 -80663874 + (TATG)n Simple_repeat Simple_repeat 3 59 0 537 270 158 7 chr2 172592743 172593021 -80663562 - L1ME4a LINE L1 -227 5894 5575 24 85 0 0 chr2 172593516 172593575 -80663008 + AT_rich Low_complexity Low_complexity 1 59 0 692 151 0 72 chr2 172593920 172594072 -80662511 - L1MA1 LINE L1 0 6302 6162 419 253 49 19 chr2 172594086 172594248 -80662335 - L2 LINE L2 -1 3312 3146 21 0 0 0 chr2 172594251 172594272 -80662311 + AT_rich Low_complexity Low_complexity 1 21 0 3184 277 157 14 chr2 172594313 172595732 -80660851 - L2 LINE L2 -140 3173 1545 333 290 20 30 chr2 172595884 172595984 -80660599 + L2 LINE L2 3205 3303 -10 21 82 0 0 chr2 172596034 172596083 -80660500 + AT_rich Low_complexity Low_complexity 1 49 0 422 275 38 8 chr2 172596277 172596408 -80660175 - MIR SINE MIR -108 154 20 2101 92 4 7 chr2 172596447 172596751 -80659832 - AluSg SINE Alu 0 303 1 670 274 103 42 chr2 172597410 172597923 -80658660 - L1MC4a LINE L1 -850 5447 5278 403 295 79 0 chr2 172598515 172598664 -80657919 + MIR SINE MIR 30 190 -63 266 281 70 9 chr2 172602734 172602848 -80653735 - MIR SINE MIR 0 262 142 4750 259 152 46 chr2 172602853 172602955 -80653628 + L2 LINE L2 580 670 -2643 2048 124 23 0 chr2 172602955 172603254 -80653329 - AluSx SINE Alu -6 306 1 4750 259 152 46 chr2 172603254 172605630 -80650953 + L2 LINE L2 670 3313 0 251 313 91 0 chr2 172605638 172605737 -80650846 - MIR SINE MIR -120 142 35 214 358 37 0 chr2 172605996 172606077 -80650506 - L2 LINE L2 -253 3019 2936 531 321 91 49 chr2 172606332 172606880 -80649703 - L2 LINE L2 -718 2596 2026 1336 220 35 49 chr2 172607322 172607668 -80648915 + MER58B DNA MER1_type 1 341 0 233 229 73 62 chr2 172607936 172608032 -80648551 + L2 LINE L2 3168 3264 -8 183 42 0 0 chr2 172609334 172609358 -80647225 + (GA)n Simple_repeat Simple_repeat 1 24 0 25 51 0 0 chr2 172609759 172609798 -80646785 + AT_rich Low_complexity Low_complexity 1 39 0 2451 70 0 0 chr2 172610049 172610347 -80646236 - AluY SINE Alu -1 310 13 2716 101 57 19 chr2 172613426 172613844 -80642739 + MER57B LTR ERV1 1 434 0 258 364 53 0 chr2 172616527 172616659 -80639924 + L2 LINE L2 2920 3058 -214 503 243 81 27 chr2 172616728 172616876 -80639707 + MIR SINE MIR 107 262 0 351 206 27 41 chr2 172616886 172616959 -80639624 - AluJo SINE Alu -145 157 86 183 167 0 0 chr2 172617128 172617170 -80639413 + (TGAA)n Simple_repeat Simple_repeat 3 44 0 180 111 0 0 chr2 172617897 172617924 -80638659 + (TG)n Simple_repeat Simple_repeat 2 28 0 1031 303 8 4 chr2 172618766 172619030 -80637553 - MLT1H1 LTR MaLR -275 280 16 27 29 0 0 chr2 172619030 172619064 -80637519 + AT_rich Low_complexity Low_complexity 1 34 0 25 31 0 0 chr2 172619131 172619163 -80637420 + AT_rich Low_complexity Low_complexity 1 32 0 345 277 89 18 chr2 172619308 172619420 -80637163 + L2 LINE L2 3153 3272 0 32 26 0 0 chr2 172621686 172621725 -80634858 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr2 172621909 172621930 -80634653 + AT_rich Low_complexity Low_complexity 1 21 0 27 29 0 0 chr2 172623309 172623343 -80633240 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr2 172623488 172623509 -80633074 + AT_rich Low_complexity Low_complexity 1 21 0 224 239 33 0 chr2 172626304 172626489 -80630094 + (TA)n Simple_repeat Simple_repeat 1 191 0 22 56 0 0 chr2 172626540 172626576 -80630007 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr2 172627492 172627515 -80629068 + AT_rich Low_complexity Low_complexity 1 23 0 21 82 0 0 chr2 172627572 172627621 -80628962 + AT_rich Low_complexity Low_complexity 1 49 0 33 85 0 0 chr2 172627928 172628010 -80628573 + AT_rich Low_complexity Low_complexity 1 82 0 284 232 14 0 chr2 172628864 172628933 -80627650 - MER103 DNA DNA -65 101 32 408 320 131 0 chr2 172629142 172629317 -80627266 + MIR SINE MIR 65 262 0 219 244 0 0 chr2 172629834 172629879 -80626704 + L2 LINE L2 3225 3269 -3 2143 62 0 0 chr2 172630182 172630440 -80626143 - AluY SINE Alu -5 306 49 2243 100 0 0 chr2 172631808 172632097 -80624486 - AluSx SINE Alu -23 289 1 271 375 10 10 chr2 172632097 172632201 -80624382 - MIR SINE MIR -60 148 45 256 207 262 62 chr2 172632426 172632571 -80624012 + MIR SINE MIR 88 261 -1 360 297 181 0 chr2 172633769 172633907 -80622676 + MIR SINE MIR 73 235 -27 3311 118 59 2 chr2 172634092 172634616 -80621967 - MER41C LTR ERV1 0 554 1 1481 104 45 5 chr2 172635051 172635272 -80621311 + MER30 DNA MER1_type 1 230 0 284 185 141 65 chr2 172636665 172636757 -80619826 + MER53 DNA DNA 2 100 -89 * 545 106 333 0 chr2 172636704 172636827 -80619756 - MER53 DNA DNA -25 164 1 227 407 47 0 chr2 172638084 172638170 -80618413 - L2 LINE L2 -42 3230 3141 516 242 48 66 chr2 172638203 172638430 -80618153 - L2 LINE L2 0 3313 3091 * 849 377 32 0 chr2 172638415 172638786 -80617797 - L2 LINE L2 -356 2958 2576 1593 174 13 22 chr2 172638932 172639243 -80617340 + AluJo SINE Alu 1 308 -4 2759 91 5 0 chr2 172640776 172641149 -80615434 + THE1C LTR MaLR 1 375 0 8937 113 49 63 chr2 172641149 172642752 -80613831 + THE1C-int LTR MaLR 1 1580 0 2325 110 21 32 chr2 172642754 172643056 -80613527 + THE1C LTR MaLR 5 304 -71 2748 10 0 0 chr2 172643056 172643360 -80613223 - AluYa5 SINE Alu -7 304 1 2325 110 21 32 chr2 172643360 172643430 -80613153 + THE1C LTR MaLR 304 373 -2 696 250 5 46 chr2 172643597 172643793 -80612790 - MER5A DNA MER1_type -1 188 1 1949 176 20 3 chr2 172644085 172644438 -80612145 + MER46B DNA MER2_type 2 235 -1 21 82 0 0 chr2 172645116 172645165 -80611418 + AT_rich Low_complexity Low_complexity 1 49 0 1820 137 43 0 chr2 172646066 172646223 -80610360 - AluSx SINE Alu -22 290 114 185 83 28 0 chr2 172646223 172646259 -80610324 + (TTTTA)n Simple_repeat Simple_repeat 2 38 0 1820 137 43 0 chr2 172646259 172646379 -80610204 - AluSx SINE Alu -198 114 1 201 94 0 0 chr2 172646383 172646415 -80610168 + (T)n Simple_repeat Simple_repeat 1 32 0 192 239 18 150 chr2 172646993 172647106 -80609477 + MIR SINE MIR 139 236 -26 439 284 117 0 chr2 172647119 172647281 -80609302 - MIR SINE MIR -1 261 81 28 48 0 0 chr2 172648683 172648725 -80607858 + AT_rich Low_complexity Low_complexity 1 42 0 1585 164 60 17 chr2 172649217 172649624 -80606959 + AluJb SINE Alu 1 420 0 961 188 0 6 chr2 172649676 172649846 -80606737 - AluJb SINE Alu -139 173 5 7072 27 0 0 chr2 172650192 172651020 -80605563 - L1PA3 LINE L1 0 6155 5328 305 138 0 17 chr2 172651900 172651958 -80604625 + (TTCC)n Simple_repeat Simple_repeat 1 57 0 2370 61 7 10 chr2 172653144 172653454 -80603129 - AluY SINE Alu -2 309 1 232 288 68 27 chr2 172654371 172654444 -80602139 - L2 LINE L2 -46 3226 3151 259 342 55 25 chr2 172655071 172655273 -80601310 - L3 LINE CR1 -706 871 664 * 344 302 223 32 chr2 172655240 172655675 -80600908 + L2 LINE L2 2531 3070 -243 292 243 188 45 chr2 172655687 172655889 -80600694 + L1MC5 LINE L1 7701 7931 -30 235 197 56 42 chr2 172655893 172655964 -80600619 + AluJ/FRAM SINE Alu 231 302 0 614 272 149 21 chr2 172656176 172656599 -80599984 + L1ME LINE L1 4803 5279 -867 312 327 77 36 chr2 172656640 172656888 -80599695 + L1ME LINE L1 5317 5574 -590 182 37 37 0 chr2 172658331 172658358 -80598225 + (TA)n Simple_repeat Simple_repeat 1 28 0 25 31 0 0 chr2 172659030 172659062 -80597521 + AT_rich Low_complexity Low_complexity 1 32 0 2353 58 0 55 chr2 172659068 172659380 -80597203 + AluY SINE Alu 1 295 -16 285 347 99 19 chr2 172659386 172659433 -80597150 + MIR SINE MIR 32 74 -188 2499 63 0 13 chr2 172659433 172659748 -80596835 + AluY SINE Alu 1 311 0 285 347 99 19 chr2 172659748 172659913 -80596670 + MIR SINE MIR 74 261 -1 245 351 22 37 chr2 172660362 172660496 -80596087 - MIR SINE MIR -130 132 1 359 148 6 225 chr2 172661559 172661728 -80594855 + L1MA8 LINE L1 6158 6289 -2 695 270 5 25 chr2 172661878 172662074 -80594509 - MIR SINE MIR -53 209 18 7307 159 25 24 chr2 172662663 172665009 -80591574 - L1MA5 LINE L1 -126 7236 4892 6060 208 77 40 chr2 172664993 172665522 -80591061 - L1MA5 LINE L1 -3178 4030 3522 * 2312 102 0 0 chr2 172665522 172665817 -80590766 + AluY SINE Alu 2 296 -15 6060 208 77 40 chr2 172665817 172665991 -80590592 - L1MA5 LINE L1 -3686 3522 3356 1367 174 80 67 chr2 172665991 172666290 -80590293 - AluJb SINE Alu -9 303 1 6060 208 77 40 chr2 172666290 172668677 -80587906 - L1MA5 LINE L1 -3852 3356 24 189 74 0 0 chr2 172669840 172669867 -80586716 + (CA)n Simple_repeat Simple_repeat 2 28 0 845 306 51 24 chr2 172672730 172673066 -80583517 - MLT1J LTR MaLR -53 458 114 1429 191 93 28 chr2 172673263 172673448 -80583135 - MER2 DNA MER2_type 0 345 173 1970 149 33 9 chr2 172673448 172673777 -80582806 + MER1B DNA MER1_type 1 337 0 1429 191 93 28 chr2 172673777 172673915 -80582668 - MER2 DNA MER2_type -172 173 1 37 62 0 0 chr2 172674422 172674487 -80582096 + AT_rich Low_complexity Low_complexity 1 65 0 312 263 179 6 chr2 172675066 172675222 -80581361 - MIR SINE MIR -43 219 37 259 216 153 12 chr2 172675311 172675412 -80581171 + MIR SINE MIR 34 145 -63 807 305 106 8 chr2 172675424 172675605 -80580978 - L2 LINE L2 -1 3312 3150 2032 129 10 26 chr2 172675605 172675916 -80580667 + AluSx SINE Alu 2 307 -5 807 305 106 8 chr2 172675916 172675928 -80580655 - L2 LINE L2 -163 3150 3141 1786 100 140 0 chr2 172675928 172676199 -80580384 + AluSq SINE Alu 1 309 -4 2250 118 3 0 chr2 172676202 172676508 -80580075 + AluSq SINE Alu 3 309 -4 807 305 106 8 chr2 172676508 172676666 -80579917 - L2 LINE L2 -173 3140 2921 225 283 50 20 chr2 172678074 172678173 -80578410 - MIR SINE MIR -112 150 49 185 262 24 0 chr2 172678658 172678700 -80577883 + MER5A DNA MER1_type 2 44 -145 2321 91 0 0 chr2 172678701 172678997 -80577586 + AluSq SINE Alu 1 296 -17 911 116 7 34 chr2 172679044 172679191 -80577392 + FLAM_C SINE Alu 1 143 0 249 241 0 37 chr2 172679191 172679245 -80577338 + MER5A DNA MER1_type 107 158 -31 477 196 165 0 chr2 172679303 172679400 -80577183 - MER63 DNA MER1_type -323 739 1 183 189 0 0 chr2 172681117 172681154 -80575429 - L2 LINE L2 -1 3312 3276 1036 225 19 5 chr2 172681979 172682188 -80574395 + MER58A DNA MER1_type 1 212 -12 1685 177 45 10 chr2 172682500 172682788 -80573795 + AluJo SINE Alu 2 299 -13 315 230 81 0 chr2 172683953 172684027 -80572556 + L2 LINE L2 3226 3305 -8 1840 157 3 7 chr2 172684322 172684615 -80571968 + AluJb SINE Alu 7 298 -14 500 353 71 14 chr2 172684643 172684938 -80571645 - L2 LINE L2 -7 3306 2995 199 282 114 30 chr2 172685114 172685245 -80571338 + L2 LINE L2 3123 3264 -8 207 218 73 0 chr2 172686498 172686553 -80570030 + L2 LINE L2 3255 3313 0 25 0 0 0 chr2 172687041 172687066 -80569517 + AT_rich Low_complexity Low_complexity 1 25 0 493 266 94 70 chr2 172688216 172688439 -80568144 - L1ME4a LINE L1 -236 5885 5669 2131 125 3 0 chr2 172688439 172688734 -80567849 + AluSq SINE Alu 1 296 -17 493 266 94 70 chr2 172688734 172688999 -80567584 - L1ME4a LINE L1 -452 5669 5385 21 0 0 0 chr2 172689000 172689021 -80567562 + AT_rich Low_complexity Low_complexity 1 21 0 2719 204 97 3 chr2 172689102 172689699 -80566884 + MER82 DNA MER2_type 1 653 0 700 278 74 4 chr2 172690432 172690662 -80565921 - MIR SINE MIR -5 257 12 670 275 45 33 chr2 172691005 172691249 -80565334 + MIR SINE MIR 2 248 -14 259 257 36 21 chr2 172691323 172691463 -80565120 - Charlie7 DNA MER1_type -4 2608 2467 471 18 0 0 chr2 172692351 172692407 -80564176 + (CA)n Simple_repeat Simple_repeat 2 57 0 2219 109 3 3 chr2 172692819 172693121 -80563462 - AluSq SINE Alu -11 302 1 206 156 22 0 chr2 172693214 172693259 -80563324 + GA-rich Low_complexity Low_complexity 1 46 0 215 337 48 12 chr2 172693373 172693456 -80563127 - L2 LINE L2 0 3313 3228 1832 242 24 0 chr2 172693458 172693876 -80562707 + LTR40c LTR ERVL 1 428 -37 22 0 0 0 chr2 172693959 172693981 -80562602 + AT_rich Low_complexity Low_complexity 1 22 0 424 329 88 40 chr2 172694732 172694981 -80561602 - L2 LINE L2 0 3272 3012 2045 152 19 43 chr2 172695079 172695311 -80561272 - MLT1A1 LTR MaLR 0 365 144 1992 160 0 3 chr2 172695311 172695624 -80560959 + AluSx SINE Alu 1 312 0 2045 152 19 43 chr2 172695624 172695765 -80560818 - MLT1A1 LTR MaLR -221 144 1 1144 161 196 16 chr2 172696000 172696132 -80560451 - AluSg1 SINE Alu -8 301 194 328 20 20 20 chr2 172696132 172696182 -80560401 + (TTTTG)n Simple_repeat Simple_repeat 2 51 0 1144 161 196 16 chr2 172696182 172696304 -80560279 - AluSg1 SINE Alu -115 194 1 2090 125 19 27 chr2 172697861 172698230 -80558353 + MER47A DNA MER2_type 1 366 0 23 0 0 0 chr2 172698357 172698380 -80558203 + AT_rich Low_complexity Low_complexity 1 23 0 37 39 0 0 chr2 172698715 172698766 -80557817 + AT_rich Low_complexity Low_complexity 1 51 0 307 93 0 0 chr2 172698770 172698813 -80557770 - tRNA-Cys-TGC tRNA tRNA -32 43 1 2401 84 0 0 chr2 172701917 172702215 -80554368 - AluSx SINE Alu -14 298 1 2057 107 39 0 chr2 172702489 172702770 -80553813 + AluSc SINE Alu 1 292 -17 1786 178 0 3 chr2 172702799 172703097 -80553486 - AluSx SINE Alu -9 303 7 2434 99 0 0 chr2 172703949 172704262 -80552321 + AluSq SINE Alu 1 313 0 226 313 36 27 chr2 172704452 172704564 -80552019 + L3b LINE CR1 1390 1502 -81 424 201 13 128 chr2 172704822 172704877 -80551706 + L2 LINE L2 3182 3242 -71 2078 130 10 0 chr2 172704877 172705184 -80551399 - AluSx SINE Alu 0 312 3 424 201 13 128 chr2 172705184 172705277 -80551306 + L2 LINE L2 3242 3313 0 493 293 98 19 chr2 172705555 172705760 -80550823 + MIR SINE MIR 41 261 -1 1289 206 92 70 chr2 172705827 172706284 -80550299 - MLT1C LTR MaLR 0 467 1 330 369 43 0 chr2 172706415 172706556 -80550027 + MIR3 SINE MIR 37 183 -25 664 181 22 0 chr2 172706675 172706813 -80549770 + L1MA8 LINE L1 6148 6288 -3 2737 192 38 6 chr2 172707186 172707717 -80548866 + MER44D DNA MER2_type 2 604 -1 663 298 118 64 chr2 172708473 172708824 -80547759 - L2 LINE L2 0 3313 2982 2109 111 53 39 chr2 172708824 172709183 -80547400 - THE1B LTR MaLR 0 364 1 663 298 118 64 chr2 172709183 172709808 -80546775 - L2 LINE L2 -331 2982 2292 333 261 93 25 chr2 172710469 172710630 -80545953 - MIR SINE MIR 0 262 91 1803 212 69 5 chr2 172711492 172711884 -80544699 - MER47B DNA MER2_type -1 417 1 753 191 158 16 chr2 172713968 172714151 -80542432 - MER63A DNA MER1_type 0 210 2 1050 279 121 81 chr2 172714497 172715387 -80541196 - L3 LINE CR1 -28 1549 624 1576 169 7 28 chr2 172715738 172716022 -80540561 + AluJo SINE Alu 1 278 -34 393 113 0 0 chr2 172716025 172716078 -80540505 + (GA)n Simple_repeat Simple_repeat 2 54 0 766 192 9 14 chr2 172716078 172716434 -80540149 + GA-rich Low_complexity Low_complexity 1 354 0 687 256 6 14 chr2 172716450 172716945 -80539638 + GA-rich Low_complexity Low_complexity 1 490 0 186 240 147 0 chr2 172717116 172717191 -80539392 - L2 LINE L2 -124 3189 3104 1720 192 10 0 chr2 172717220 172717528 -80539055 + AluJb SINE Alu 1 311 -1 3555 158 46 42 chr2 172717850 172718701 -80537882 + L1MB7 LINE L1 5314 6167 -17 712 132 35 9 chr2 172718851 172718965 -80537618 + FLAM_C SINE Alu 6 122 -21 2063 195 83 15 chr2 172719674 172720141 -80536442 - MLT1D LTR MaLR -6 499 1 198 0 0 0 chr2 172720414 172720436 -80536147 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 457 297 16 60 chr2 172721030 172721089 -80535494 - MER5B DNA MER1_type -4 174 114 1570 192 6 40 chr2 172721089 172721369 -80535214 + AluJo SINE Alu 1 270 -42 207 0 0 0 chr2 172721369 172721392 -80535191 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 1570 192 6 40 chr2 172721392 172721434 -80535149 + AluJo SINE Alu 270 312 0 457 297 16 60 chr2 172721434 172721556 -80535027 - MER5B DNA MER1_type -64 114 1 448 315 107 28 chr2 172721758 172721974 -80534609 + MIR SINE MIR 20 252 -10 342 0 0 0 chr2 172722029 172722067 -80534516 + (CA)n Simple_repeat Simple_repeat 1 38 0 999 195 9 14 chr2 172722477 172722687 -80533896 - MER3 DNA MER1_type 0 209 1 257 164 82 0 chr2 172723397 172723458 -80533125 + MLT1I LTR MaLR 1 66 -343 699 228 138 12 chr2 172723554 172723808 -80532775 + MLT1I LTR MaLR 98 383 -26 21 71 0 0 chr2 172724568 172724610 -80531973 + AT_rich Low_complexity Low_complexity 1 42 0 31 0 0 0 chr2 172724667 172724698 -80531885 + AT_rich Low_complexity Low_complexity 1 31 0 35 41 0 0 chr2 172724753 172724802 -80531781 + AT_rich Low_complexity Low_complexity 1 49 0 369 0 0 0 chr2 172724805 172724846 -80531737 + (CA)n Simple_repeat Simple_repeat 2 42 0 216 0 0 0 chr2 172724845 172724869 -80531714 + (TA)n Simple_repeat Simple_repeat 2 25 0 * 269 345 11 0 chr2 172726253 172726340 -80530243 - L2 LINE L2 -3 3269 3182 468 329 201 14 chr2 172726678 172726967 -80529616 - L3 LINE CR1 -181 1396 1054 676 298 96 16 chr2 172727181 172727493 -80529090 + LTR16A LTR ERVL 109 445 -5 3586 318 42 26 chr2 172727609 172729516 -80527067 + HERV16 LTR ERVL 1449 3090 -1906 1167 154 131 0 chr2 172730159 172730426 -80526157 + MER33 DNA MER1_type 1 302 -22 754 304 17 0 chr2 172730536 172730773 -80525810 + HERV16 LTR ERVL 4106 4346 -1308 354 358 47 35 chr2 172730980 172731321 -80525262 + HERV16 LTR ERVL 4612 4956 -808 672 285 113 26 chr2 172731767 172732156 -80524427 + LTR16A LTR ERVL 28 450 0 191 326 68 15 chr2 172732243 172732375 -80524208 + L2 LINE L2 2246 2384 -930 189 366 84 8 chr2 172733145 172733276 -80523307 - L2 LINE L2 -3 3310 3170 270 326 12 81 chr2 172733532 172733704 -80522879 - L2 LINE L2 -464 2850 2691 23 0 0 0 chr2 172735528 172735551 -80521032 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr2 172735719 172735743 -80520840 + AT_rich Low_complexity Low_complexity 1 24 0 286 330 91 23 chr2 172736698 172736874 -80519709 + L3b LINE CR1 1374 1561 -22 214 306 47 0 chr2 172740056 172740141 -80516442 + L2 LINE L2 3184 3272 0 333 256 0 0 chr2 172741938 172742028 -80514555 - L1MC4 LINE L1 -1339 6703 6614 231 36 0 0 chr2 172742028 172742056 -80514527 + (TA)n Simple_repeat Simple_repeat 2 29 0 23 0 0 0 chr2 172742338 172742361 -80514222 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr2 172743067 172743092 -80513491 + AT_rich Low_complexity Low_complexity 1 25 0 285 98 0 0 chr2 172744630 172744671 -80511912 + (TCC)n Simple_repeat Simple_repeat 2 42 0 1054 202 0 39 chr2 172746386 172746619 -80509964 - MER58A DNA MER1_type 0 224 1 325 338 62 21 chr2 172746619 172746764 -80509819 - MIR3 SINE MIR -48 160 10 25 0 0 0 chr2 172748486 172748511 -80508072 + AT_rich Low_complexity Low_complexity 1 25 0 1951 148 3 7 chr2 172748764 172749061 -80507522 + AluJb SINE Alu 1 296 -16 411 132 19 9 chr2 172749062 172749168 -80507415 + (TA)n Simple_repeat Simple_repeat 2 108 0 2254 102 0 10 chr2 172749723 172750028 -80506555 - AluSx SINE Alu 0 312 11 1926 173 0 0 chr2 172750339 172750645 -80505938 + AluSx SINE Alu 1 306 -6 2016 137 69 29 chr2 172751162 172751512 -80505071 + THE1B LTR MaLR 1 364 0 4582 108 52 65 chr2 172751512 172752340 -80504243 + THE1B-int LTR MaLR 1 817 -763 484 120 120 11 chr2 172752344 172752436 -80504147 + THE1B LTR MaLR 212 313 -51 804 237 43 19 chr2 172753078 172753289 -80503294 - MIR SINE MIR -29 233 18 204 300 80 30 chr2 172753563 172753663 -80502920 - L2 LINE L2 -257 3015 2911 206 295 16 0 chr2 172753928 172753989 -80502594 + (TG)n Simple_repeat Simple_repeat 1 62 0 202 114 29 0 chr2 172754469 172754504 -80502079 + A-rich Low_complexity Low_complexity 3 38 0 242 355 37 47 chr2 172754775 172754882 -80501701 - MIR SINE MIR -67 141 36 2115 137 7 0 chr2 172755077 172755383 -80501200 + AluSg SINE Alu 1 308 -2 452 319 7 21 chr2 172755674 172755815 -80500768 + L2 LINE L2 3134 3272 0 224 324 114 9 chr2 172755837 172755942 -80500641 - L2 LINE L2 -40 3232 3117 254 175 0 18 chr2 172756606 172756663 -80499920 + CT-rich Low_complexity Low_complexity 4 59 0 243 253 63 13 chr2 172806664 172806743 -80449840 + L2 LINE L2 3201 3283 -30 250 265 143 77 chr2 172807210 172807406 -80449177 + MIR SINE MIR 48 256 -6 3374 54 0 69 chr2 172807542 172808023 -80448560 - LTR7 LTR ERV1 -2 448 1 54651 74 16 12 chr2 172808023 172815706 -80440877 - HERVH LTR ERV1 0 7713 1 3191 64 0 69 chr2 172815708 172816189 -80440394 - LTR7 LTR ERV1 -2 448 1 2206 96 0 0 chr2 172817015 172817307 -80439276 + AluSc SINE Alu 1 292 -17 644 227 77 21 chr2 172818114 172818161 -80438422 - L1MC4 LINE L1 -1 8041 7998 1398 218 13 53 chr2 172818161 172818538 -80438045 + MLT1A1 LTR MaLR 1 362 -3 644 227 77 21 chr2 172818538 172818684 -80437899 - L1MC4 LINE L1 -44 7998 7837 797 206 164 33 chr2 172819329 172819505 -80437078 - MER69 DNA AcHobo -4 2522 2370 1851 166 0 7 chr2 172819505 172819794 -80436789 + AluJb SINE Alu 2 288 -24 797 206 164 33 chr2 172819794 172819947 -80436636 - MER69 DNA AcHobo -156 2370 2150 214 333 27 27 chr2 172822068 172822179 -80434404 + L2 LINE L2 2981 3091 -181 817 294 38 39 chr2 172823360 172823711 -80432872 - L1ME LINE L1 -466 5655 5324 1899 189 56 52 chr2 172823785 172824288 -80432295 + MLT1D LTR MaLR 1 505 0 3167 244 123 35 chr2 172824632 172824726 -80431857 + L1MC4 LINE L1 6459 6543 -1499 2232 105 7 0 chr2 172824726 172825022 -80431561 + AluSx SINE Alu 13 310 -2 234 0 0 0 chr2 172825022 172825048 -80431535 + (TA)n Simple_repeat Simple_repeat 2 27 0 3167 244 123 35 chr2 172825048 172826282 -80430301 + L1MC4 LINE L1 6542 7906 -136 285 98 0 0 chr2 172826284 172826325 -80430258 + (TG)n Simple_repeat Simple_repeat 1 41 0 1365 172 68 74 chr2 172826745 172827041 -80429542 + AluJo SINE Alu 1 294 -18 389 311 71 31 chr2 172828061 172828257 -80428326 + L1ME2 LINE L1 1141 1344 -5079 480 134 0 12 chr2 172828262 172828344 -80428239 + L1PA15 LINE L1 6084 6164 -1 720 215 134 14 chr2 172828345 172828568 -80428015 + L1ME2 LINE L1 3619 3868 -3073 924 167 0 32 chr2 172828568 172828724 -80427859 - AluJo SINE Alu -153 159 9 483 256 61 6 chr2 172828758 172828938 -80427645 + L1ME2 LINE L1 4388 4577 -2364 4203 199 63 20 chr2 172828938 172830413 -80426170 + L1ME2 LINE L1 4913 6476 -503 1526 185 59 0 chr2 172830413 172830700 -80425883 + AluJo SINE Alu 1 304 -8 4203 199 63 20 chr2 172830700 172831003 -80425580 + L1ME2 LINE L1 6476 6765 -214 1112 258 95 5 chr2 172831024 172831415 -80425168 + L1ME2 LINE L1 4566 4991 -1950 607 235 101 14 chr2 172831412 172831629 -80424954 + L1ME2 LINE L1 5420 5655 -1286 * 43142 30 21 1 chr2 172831654 172837685 -80418898 - L1PA2 LINE L1 0 6155 1 1499 132 80 25 chr2 172837725 172838040 -80418543 - THE1C LTR MaLR 0 355 1 2066 224 69 90 chr2 172838063 172838851 -80417732 + L1ME2 LINE L1 5703 6443 -516 2255 84 0 20 chr2 172838851 172839147 -80417436 - AluY SINE Alu -8 303 14 2066 224 69 90 chr2 172839147 172839637 -80416946 + L1ME2 LINE L1 6443 6942 -17 540 233 18 0 chr2 172839717 172839857 -80416726 + L1ME2 LINE L1 6818 6962 -3 816 289 39 92 chr2 172840134 172840698 -80415885 + LTR67 LTR ERVL 16 549 -8 464 355 124 22 chr2 172841606 172842075 -80414508 - L2 LINE L2 -96 3217 2678 344 324 42 0 chr2 172842138 172842280 -80414303 + HAL1 LINE L1 35 182 -2325 530 210 344 10 chr2 172842446 172842641 -80413942 + HAL1 LINE L1 417 676 -1831 1746 265 110 43 chr2 172842651 172843705 -80412878 + HAL1 LINE L1 716 1840 -667 954 335 138 45 chr2 172843707 172844695 -80411888 - L2 LINE L2 -2153 1161 83 430 290 0 0 chr2 172844731 172844831 -80411752 + MER5A DNA MER1_type 10 109 -80 24 77 0 0 chr2 172845359 172845411 -80411172 + AT_rich Low_complexity Low_complexity 1 52 0 286 22 0 44 chr2 172845411 172845456 -80411127 + (CA)n Simple_repeat Simple_repeat 2 44 0 2030 152 33 25 chr2 172846591 172846952 -80409631 + THE1B LTR MaLR 1 364 0 1636 167 9 72 chr2 172847017 172847335 -80409248 - AluJo SINE Alu -14 298 1 24 0 0 0 chr2 172848042 172848066 -80408517 + AT_rich Low_complexity Low_complexity 1 24 0 588 224 54 14 chr2 172850286 172850433 -80406150 + MIR SINE MIR 110 262 0 348 292 36 108 chr2 172850825 172851075 -80405508 + L2 LINE L2 2926 3157 -115 258 242 0 61 chr2 172851197 172851263 -80405320 - MIR SINE MIR -7 255 194 673 279 184 17 chr2 172851956 172852503 -80404080 + L2 LINE L2 2679 3309 -4 232 277 0 32 chr2 172852896 172852990 -80403593 + L1MC4 LINE L1 6616 6706 -1336 218 154 77 39 chr2 172853566 172853618 -80402965 + L2 LINE L2 3219 3272 0 2128 131 0 6 chr2 172854066 172854380 -80402203 - AluSx SINE Alu 0 312 1 225 0 0 0 chr2 172854383 172854408 -80402175 + (T)n Simple_repeat Simple_repeat 1 25 0 25 0 0 0 chr2 172854764 172854789 -80401794 + AT_rich Low_complexity Low_complexity 1 25 0 371 306 20 10 chr2 172855951 172856049 -80400534 - MER91A DNA MER1_type -97 99 1 228 367 11 11 chr2 172858110 172858200 -80398383 - MIR SINE MIR -161 101 12 1115 165 68 8 chr2 172859706 172859943 -80396640 - L1MA9 LINE L1 -6 6306 6056 237 65 0 0 chr2 172861187 172861218 -80395365 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 2048 137 0 0 chr2 172861218 172861502 -80395081 - AluSx SINE Alu -28 284 1 225 0 0 0 chr2 172861554 172861579 -80395004 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1529 149 39 52 chr2 172862782 172863090 -80393493 - AluJb SINE Alu -8 304 1 526 249 57 40 chr2 172863793 172863970 -80392613 + MIR SINE MIR 16 195 -67 204 250 0 0 chr2 172864291 172864339 -80392244 - MIR SINE MIR -62 200 153 231 264 136 0 chr2 172864342 172864467 -80392116 + MER104 DNA Tc2 1 142 -38 656 201 47 40 chr2 172864489 172864638 -80391945 - MIR SINE MIR -112 150 1 2237 73 14 0 chr2 172865488 172865774 -80390809 - AluY SINE Alu -17 294 5 670 172 22 30 chr2 172865935 172866069 -80390514 - FLAM_C SINE Alu 0 133 1 187 204 143 0 chr2 172866090 172866139 -80390444 - L2 LINE L2 -1 3271 3216 1751 88 0 0 chr2 172867860 172868076 -80388507 - AluSc SINE Alu -7 302 87 513 149 0 0 chr2 172868076 172868150 -80388433 + AluS SINE Alu 3 76 -233 2101 113 3 3 chr2 172868783 172869085 -80387498 - AluSq SINE Alu -11 302 1 2166 109 0 0 chr2 172869114 172869433 -80387150 + AluSx SINE Alu 1 319 0 1390 94 0 6 chr2 172869462 172869642 -80386941 + AluSq SINE Alu 1 179 -134 28 0 0 0 chr2 172871071 172871099 -80385484 + AT_rich Low_complexity Low_complexity 1 28 0 222 335 95 76 chr2 172872147 172872293 -80384290 - L2 LINE L2 -36 3236 3094 2051 147 3 3 chr2 172872293 172872600 -80383983 + AluJo SINE Alu 1 307 -5 222 335 95 76 chr2 172872600 172872967 -80383616 - L2 LINE L2 -178 3094 2691 211 330 124 36 chr2 172873080 172873112 -80383471 - L2 LINE L2 -829 2485 2457 2235 137 25 6 chr2 172873112 172873469 -80383114 + THE1B LTR MaLR 1 364 0 211 330 124 36 chr2 172873469 172873742 -80382841 - L2 LINE L2 -857 2457 2153 278 279 67 19 chr2 172874639 172874743 -80381840 + L2 LINE L2 3200 3308 -5 811 161 0 29 chr2 172874908 172875045 -80381538 - FLAM_C SINE Alu 0 133 1 398 265 106 65 chr2 172875620 172875790 -80380793 - MER5B DNA MER1_type 0 178 2 26 0 0 0 chr2 172876056 172876082 -80380501 + AT_rich Low_complexity Low_complexity 1 26 0 198 103 0 0 chr2 172876529 172876558 -80380025 + (A)n Simple_repeat Simple_repeat 1 29 0 289 211 0 0 chr2 172876860 172876917 -80379666 - MER5A DNA MER1_type -6 183 127 836 228 150 67 chr2 172878394 172878780 -80377803 - LTR41 LTR ERVL -20 753 336 871 241 117 11 chr2 172879088 172879354 -80377229 - LTR41 LTR ERVL -477 296 3 4209 291 62 13 chr2 172879871 172880637 -80375946 - HERVL LTR ERVL -1210 4444 3717 288 0 0 0 chr2 172880637 172880669 -80375914 + (TTG)n Simple_repeat Simple_repeat 2 33 0 4209 291 62 13 chr2 172880669 172881299 -80375284 - HERVL LTR ERVL -1937 3717 2979 1602 191 24 10 chr2 172881310 172881608 -80374975 + AluJb SINE Alu 1 302 -10 3202 265 87 16 chr2 172881649 172882264 -80374319 - HERVL LTR ERVL -2885 2879 2176 1511 116 17 30 chr2 172882264 172882497 -80374086 + MER30 DNA MER1_type 1 230 0 3202 265 87 16 chr2 172882497 172882799 -80373784 - HERVL LTR ERVL -3588 2176 1897 250 351 23 30 chr2 172882997 172883128 -80373455 - HERVL LTR ERVL -4140 1624 1495 914 255 57 5 chr2 172883534 172883746 -80372837 - MER58A DNA MER1_type -1 223 1 711 139 9 0 chr2 172884562 172884670 -80371913 + FLAM_A SINE Alu 18 126 -16 381 258 104 33 chr2 172885082 172885322 -80371261 + L1MC4a LINE L1 5631 5887 -1921 21 0 0 0 chr2 172885364 172885385 -80371198 + AT_rich Low_complexity Low_complexity 1 21 0 1372 256 123 54 chr2 172885557 172886357 -80370226 + HAL1 LINE L1 1615 2469 -38 1177 231 106 0 chr2 172886383 172886694 -80369889 + MER2 DNA MER2_type 1 344 0 751 281 67 5 chr2 172886695 172886905 -80369678 + MIR SINE MIR 24 246 -16 611 306 188 17 chr2 172887179 172887695 -80368888 - L2 LINE L2 -236 3036 2440 2151 89 41 3 chr2 172888037 172888329 -80368254 + AluY SINE Alu 1 303 -8 360 0 0 0 chr2 172888457 172888497 -80368086 + (TG)n Simple_repeat Simple_repeat 2 41 0 323 387 87 17 chr2 172888826 172889107 -80367476 - L2 LINE L2 -519 2795 2484 1521 166 65 39 chr2 172889107 172889463 -80367120 - MLT1A1 LTR MaLR 0 365 1 323 387 87 17 chr2 172889463 172889527 -80367056 - L2 LINE L2 -830 2484 2426 810 124 0 9 chr2 172889597 172889710 -80366873 + FLAM_A SINE Alu 20 131 -11 552 221 96 66 chr2 172889710 172889981 -80366602 - MER46C DNA MER2_type -52 286 8 267 93 0 0 chr2 172891228 172891271 -80365312 + (TG)n Simple_repeat Simple_repeat 2 44 0 22 0 0 0 chr2 172891417 172891439 -80365144 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr2 172892600 172892623 -80363960 + AT_rich Low_complexity Low_complexity 1 23 0 354 61 0 0 chr2 172896315 172896364 -80360219 + (GA)n Simple_repeat Simple_repeat 2 50 0 1475 103 115 12 chr2 172896364 172896607 -80359976 - MER46B DNA MER2_type -93 143 1 21 0 0 0 chr2 172896662 172896683 -80359900 + AT_rich Low_complexity Low_complexity 1 21 0 338 89 0 18 chr2 172896997 172897053 -80359530 + (CA)n Simple_repeat Simple_repeat 1 55 0 340 222 0 0 chr2 172897130 172897193 -80359390 + L2 LINE L2 3251 3313 0 231 308 58 19 chr2 172897404 172897508 -80359075 + MIR3 SINE MIR 97 204 -4 186 43 0 0 chr2 172897523 172897546 -80359037 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 307 95 0 0 chr2 172898181 172898223 -80358360 + L2 LINE L2 3263 3304 -9 306 273 165 6 chr2 172898717 172898893 -80357690 - L1ME4a LINE L1 -223 5898 5695 813 164 0 7 chr2 172898939 172899079 -80357504 - FLAM_C SINE Alu -2 141 3 1473 214 50 0 chr2 172899083 172899241 -80357342 - AluJb SINE Alu -18 294 114 216 0 0 0 chr2 172899241 172899265 -80357318 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1473 214 50 0 chr2 172899265 172899386 -80357197 - AluJb SINE Alu -197 115 1 2389 117 22 6 chr2 172899776 172900134 -80356449 + THE1B LTR MaLR 1 364 0 21 36 0 0 chr2 172900469 172900497 -80356086 + AT_rich Low_complexity Low_complexity 1 28 0 938 251 152 41 chr2 172901123 172901585 -80354998 + MLT1H LTR MaLR 3 515 -34 953 176 0 0 chr2 172902256 172902415 -80354168 + MER58A DNA MER1_type 43 201 -23 255 244 158 0 chr2 172903347 172903429 -80353154 - MIR SINE MIR -11 251 157 1506 150 92 15 chr2 172904025 172904318 -80352265 - AluSx SINE Alu 0 312 1 637 266 142 51 chr2 172905397 172905713 -80350870 - L1ME3A LINE L1 -268 5902 5558 186 103 0 0 chr2 172905767 172905796 -80350787 + (CA)n Simple_repeat Simple_repeat 1 29 0 2608 42 0 3 chr2 172905996 172906305 -80350278 - AluY SINE Alu -3 308 1 527 296 136 0 chr2 172907463 172907676 -80348907 - MIR SINE MIR -15 247 6 191 223 11 85 chr2 172907836 172907930 -80348653 - L2 LINE L2 -95 3218 3132 2887 13 0 0 chr2 172908231 172908549 -80348034 - AluYb8 SINE Alu 0 318 1 487 303 15 0 chr2 172908579 172908711 -80347872 - L2 LINE L2 -2 3270 3137 26 0 0 0 chr2 172909485 172909511 -80347072 + AT_rich Low_complexity Low_complexity 1 26 0 28 29 0 0 chr2 172909783 172909818 -80346765 + AT_rich Low_complexity Low_complexity 1 35 0 1944 160 0 0 chr2 172909918 172910224 -80346359 + AluSx SINE Alu 6 311 -1 415 309 84 35 chr2 172910401 172910712 -80345871 - MLT1L LTR MaLR -73 542 217 188 288 17 0 chr2 172910885 172910944 -80345639 + L2 LINE L2 3187 3246 -67 918 211 34 29 chr2 172911152 172911356 -80345227 - MLT1A2 LTR MaLR -165 209 5 21 36 0 0 chr2 172911356 172911384 -80345199 + AT_rich Low_complexity Low_complexity 1 28 0 463 321 112 12 chr2 172911567 172911784 -80344799 - MIR SINE MIR -1 261 25 189 0 0 0 chr2 172912583 172912604 -80343979 + (TTTTTG)n Simple_repeat Simple_repeat 4 24 0 306 325 40 0 chr2 172912604 172912730 -80343853 - L3 LINE CR1 -79 1498 1368 775 235 36 68 chr2 172912735 172912986 -80343597 - MLT1I LTR MaLR -5 404 162 183 325 26 61 chr2 172913155 172913269 -80343314 - L3 LINE CR1 -293 1284 1175 586 304 16 27 chr2 172913654 172913838 -80342745 + MIR SINE MIR 10 191 -71 353 255 125 98 chr2 172914041 172914179 -80342404 + MER5A DNA MER1_type 1 147 -42 1067 127 5 21 chr2 172914179 172914368 -80342215 - MER53 DNA DNA 0 189 4 353 255 125 98 chr2 172914368 172914413 -80342170 + MER5A DNA MER1_type 147 189 0 219 147 0 0 chr2 172914460 172914494 -80342089 + (GGAA)n Simple_repeat Simple_repeat 3 36 0 763 127 62 4 chr2 172914494 172914741 -80341842 + GA-rich Low_complexity Low_complexity 1 261 0 270 0 0 0 chr2 172914934 172914964 -80341619 + (T)n Simple_repeat Simple_repeat 1 30 0 436 227 97 51 chr2 172915425 172915601 -80340982 + MIR SINE MIR 79 262 0 184 209 47 0 chr2 172917166 172917209 -80339374 - L2 LINE L2 -4 3309 3265 190 111 0 44 chr2 172917225 172917270 -80339313 + (GGAGAA)n Simple_repeat Simple_repeat 4 46 0 240 322 125 26 chr2 172917515 172917667 -80338916 + MIR SINE MIR 8 174 -88 743 240 51 24 chr2 172917694 172917948 -80338635 + MIR SINE MIR 2 262 0 254 128 0 0 chr2 172918251 172918290 -80338293 + FLAM SINE Alu 88 126 -7 181 200 25 0 chr2 172918680 172918720 -80337863 - L2 LINE L2 -5 3267 3227 745 251 30 44 chr2 172919368 172919639 -80336944 + L1MC4a LINE L1 5613 5879 -1929 29 0 0 0 chr2 172919896 172919925 -80336658 + AT_rich Low_complexity Low_complexity 1 29 0 1461 251 19 67 chr2 172921644 172921719 -80334864 + MER34 LTR ERV1 1 78 -464 1967 147 7 7 chr2 172921719 172922019 -80334564 + AluSx SINE Alu 1 300 -12 1461 251 19 67 chr2 172922019 172922512 -80334071 + MER34 LTR ERV1 78 542 0 21 71 0 0 chr2 172922523 172922565 -80334018 + AT_rich Low_complexity Low_complexity 1 42 0 245 267 167 0 chr2 172922635 172922755 -80333828 - L1ME LINE L1 -348 5773 5634 889 282 78 46 chr2 172924048 172924679 -80331904 - HAL1 LINE L1 0 2507 1857 2082 243 78 32 chr2 172925003 172925611 -80330972 - HAL1 LINE L1 -658 1849 1191 889 78 78 0 chr2 172925611 172925740 -80330843 - MER85 DNA T2_type 0 139 1 2082 243 78 32 chr2 172925740 172925970 -80330613 - HAL1 LINE L1 -1316 1191 973 533 295 68 32 chr2 172926009 172926260 -80330323 + MIR SINE MIR 2 261 -1 689 213 7 20 chr2 172926261 172926411 -80330172 - HAL1 LINE L1 -1575 932 785 303 273 45 39 chr2 172928068 172928190 -80328393 - MIR SINE MIR -38 224 99 580 221 9 0 chr2 172928190 172928303 -80328280 + MER81 DNA DNA 1 114 0 303 273 45 39 chr2 172928303 172928334 -80328249 - MIR SINE MIR -163 99 70 1586 184 7 24 chr2 172928430 172928724 -80327859 - AluJo SINE Alu -23 289 1 208 250 28 28 chr2 172928877 172928949 -80327634 - MIR3 SINE MIR -48 160 89 4053 164 43 1 chr2 172930080 172930783 -80325800 - MER44D DNA MER2_type 0 605 2 860 68 76 0 chr2 172932163 172932281 -80324302 + AluY SINE Alu 180 306 -5 231 103 0 0 chr2 172932451 172932490 -80324093 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 241 196 0 39 chr2 172933578 172933629 -80322954 + L2 LINE L2 3265 3313 0 230 0 0 32 chr2 172933775 172933806 -80322777 + (TAAAAA)n Simple_repeat Simple_repeat 1 30 0 250 235 185 0 chr2 172933886 172933967 -80322616 + MLT1L LTR MaLR 503 598 -17 1332 119 42 19 chr2 172934392 172934652 -80321931 - MER33 DNA MER1_type -23 301 36 273 301 252 0 chr2 172935174 172935297 -80321286 + MIR SINE MIR 1 154 -108 1472 266 96 11 chr2 172935300 172935758 -80320825 + MLT1J LTR MaLR 1 497 -14 232 321 0 45 chr2 172935762 172935874 -80320709 + MIR SINE MIR 156 262 0 228 250 24 48 chr2 172936735 172936819 -80319764 + MIR SINE MIR 180 261 -1 312 275 125 62 chr2 172937829 172937989 -80318594 + MER91A DNA MER1_type 1 170 -26 264 278 62 21 chr2 172938110 172938207 -80318376 - MIR3 SINE MIR 0 208 108 1395 141 35 51 chr2 172938210 172938465 -80318118 + MSTB LTR MaLR 5 255 -171 1204 214 0 9 chr2 172938468 172938692 -80317891 - AluJb SINE Alu -22 290 69 724 206 6 31 chr2 172938692 172938852 -80317731 - AluJo SINE Alu -156 156 1 729 156 220 0 chr2 172938852 172938993 -80317590 + MSTB LTR MaLR 255 426 0 23 54 0 0 chr2 172939025 172939062 -80317521 + AT_rich Low_complexity Low_complexity 1 37 0 343 323 23 118 chr2 172939274 172939537 -80317046 + L2 LINE L2 3026 3263 -9 2548 207 14 56 chr2 172939796 172940389 -80316194 + MLT1E LTR MaLR 26 593 0 721 136 11 38 chr2 172940436 172940620 -80315963 + GA-rich Low_complexity Low_complexity 2 180 0 288 352 65 20 chr2 172941010 172941127 -80315456 - MIR SINE MIR -6 256 125 279 0 0 0 chr2 172941127 172941158 -80315425 + (CA)n Simple_repeat Simple_repeat 2 32 0 288 352 65 20 chr2 172941158 172941239 -80315344 - MIR SINE MIR -137 125 49 439 300 72 4 chr2 172941391 172941641 -80314942 + L1M3 LINE L1 5299 5565 -603 2255 87 7 3 chr2 172941853 172942152 -80314431 + AluSg SINE Alu 1 300 -10 396 0 0 0 chr2 172943722 172943766 -80312817 + (TG)n Simple_repeat Simple_repeat 1 44 0 289 189 21 0 chr2 172943767 172943862 -80312721 + (TA)n Simple_repeat Simple_repeat 2 98 0 29 0 0 0 chr2 172946368 172946397 -80310186 + AT_rich Low_complexity Low_complexity 1 29 0 14169 176 48 88 chr2 172947768 172948093 -80308490 - L1MA6 LINE L1 0 7002 6665 351 154 0 15 chr2 172948093 172948158 -80308425 + MADE1 DNA Mariner 17 80 0 14169 176 48 88 chr2 172948158 172949299 -80307284 - L1MA6 LINE L1 -337 6665 5479 1467 181 73 7 chr2 172949299 172949587 -80306996 - AluJb SINE Alu 0 312 6 14169 176 48 88 chr2 172949587 172953255 -80303328 - L1MA6 LINE L1 -1523 5479 2022 488 245 50 57 chr2 172953255 172953414 -80303169 - AluJo SINE Alu -74 238 81 14169 176 48 88 chr2 172953414 172955356 -80301227 - L1MA6 LINE L1 -4980 2022 3 398 245 166 53 chr2 172955500 172955630 -80300953 + LTR16A1 LTR ERVL 51 165 -292 1212 189 50 98 chr2 172955630 172956068 -80300515 + MER96B DNA MER1_type 1 417 0 398 245 166 53 chr2 172956068 172956239 -80300344 + LTR16A1 LTR ERVL 165 386 -71 266 321 21 64 chr2 172956290 172956372 -80300211 - MIR SINE MIR -128 134 57 1697 166 7 4 chr2 172956372 172956681 -80299902 + AluJb SINE Alu 3 312 0 266 321 21 64 chr2 172956681 172956736 -80299847 - MIR SINE MIR -205 57 1 2218 147 102 34 chr2 172956894 172957363 -80299220 + MLT1D LTR MaLR 1 501 -4 25 0 0 0 chr2 172957489 172957514 -80299069 + AT_rich Low_complexity Low_complexity 1 25 0 1613 164 55 33 chr2 172958419 172958784 -80297799 - THE1C LTR MaLR -2 373 1 23 0 0 0 chr2 172959010 172959033 -80297550 + AT_rich Low_complexity Low_complexity 1 23 0 2293 100 54 17 chr2 172959752 172960103 -80296480 - THE1B LTR MaLR 0 364 1 10375 101 3 5 chr2 172960104 172961687 -80294896 - THE1B-int LTR MaLR -1 1579 1 933 129 18 37 chr2 172961687 172961748 -80294835 - THE1B LTR MaLR 0 355 294 1702 127 46 120 chr2 172961748 172962141 -80294442 + THE1B LTR MaLR 1 364 0 933 129 18 37 chr2 172962141 172962242 -80294341 - THE1B LTR MaLR -61 294 196 249 278 0 0 chr2 172962300 172962354 -80294229 + L2 LINE L2 3205 3258 -14 317 265 10 10 chr2 172962636 172962738 -80293845 + (TA)n Simple_repeat Simple_repeat 1 102 0 209 366 42 0 chr2 172962746 172962817 -80293766 + MIR3 SINE MIR 92 165 -43 402 265 72 63 chr2 172963389 172963584 -80292999 - MIR SINE MIR -50 212 10 204 120 0 60 chr2 172964651 172964701 -80291882 + (TAAAAA)n Simple_repeat Simple_repeat 3 49 0 2273 103 3 13 chr2 172965159 172965471 -80291112 - AluSq SINE Alu -4 309 1 1740 228 26 45 chr2 172965636 172966274 -80290309 + L1MC4 LINE L1 6380 7074 -819 1504 260 129 30 chr2 172966501 172967263 -80289320 + L1MC4 LINE L1 7075 7911 -131 318 299 130 23 chr2 172968972 172969149 -80287434 - MER91A DNA MER1_type 0 196 1 2036 115 14 3 chr2 172969805 172970100 -80286483 - AluSx SINE Alu -2 310 13 599 239 113 48 chr2 172971533 172971763 -80284820 - MIR SINE MIR -16 246 2 497 342 75 4 chr2 172971945 172972173 -80284410 + MIR SINE MIR 7 250 -12 1581 219 14 14 chr2 172972348 172972713 -80283870 - MLT1A1 LTR MaLR 0 365 1 210 243 86 14 chr2 172972780 172972850 -80283733 + MIR SINE MIR 116 190 -72 1717 148 0 0 chr2 172972943 172973200 -80283383 + AluSx SINE Alu 48 304 -8 33 0 0 0 chr2 172973954 172973987 -80282596 + AT_rich Low_complexity Low_complexity 1 33 0 2197 124 0 0 chr2 172974058 172974365 -80282218 + AluY SINE Alu 1 307 -4 315 217 0 0 chr2 172977353 172977360 -80279223 + (TA)n Simple_repeat Simple_repeat 2 8 -76 1731 153 109 0 chr2 172977360 172977673 -80278910 + MER7A DNA MER2_type 2 346 0 315 217 0 0 chr2 172977673 172977748 -80278835 + (TA)n Simple_repeat Simple_repeat 7 84 0 298 297 38 44 chr2 172977950 172978136 -80278447 + MIR SINE MIR 34 217 -45 217 271 0 0 chr2 172978583 172978631 -80277952 + (TG)n Simple_repeat Simple_repeat 2 49 0 2437 83 0 0 chr2 172978744 172979045 -80277538 - AluSx SINE Alu -11 301 1 416 361 62 12 chr2 172979519 172979760 -80276823 + L3 LINE CR1 866 1118 -459 32 0 0 0 chr2 172979819 172979851 -80276732 + AT_rich Low_complexity Low_complexity 1 32 0 438 273 198 22 chr2 172979893 172980212 -80276371 + L3 LINE CR1 1123 1497 -80 499 200 145 21 chr2 172980294 172980439 -80276144 - MER103 DNA DNA -1 165 3 23 33 0 0 chr2 172980576 172980606 -80275977 + AT_rich Low_complexity Low_complexity 1 30 0 238 360 0 20 chr2 172980975 172981075 -80275508 + MER5B DNA MER1_type 1 98 -80 1055 214 92 62 chr2 172981146 172981731 -80274852 - L1MC5 LINE L1 -53 7908 7306 240 179 0 0 chr2 172982059 172982098 -80274485 + MER96B DNA MER1_type? 193 231 -186 226 79 0 0 chr2 172982098 172982136 -80274447 - MER96B DNA MER1_type? -313 104 67 1071 172 118 113 chr2 172982216 172982692 -80273891 - L1MC5 LINE L1 -722 7239 6762 278 221 16 8 chr2 172984940 172985023 -80271560 + AluS SINE Alu 1 58 -250 1199 162 0 24 chr2 172985023 172985233 -80271350 + AluJo SINE Alu 98 302 -10 212 351 108 40 chr2 172986399 172986547 -80270036 + L2 LINE L2 3112 3269 -3 1835 109 8 0 chr2 172987512 172987769 -80268814 + AluSq SINE Alu 42 300 -13 330 229 67 38 chr2 172988938 172989043 -80267540 - MIR3 SINE MIR -49 159 52 529 322 122 29 chr2 172989431 172989816 -80266767 + L2 LINE L2 1906 2326 -988 22 0 0 0 chr2 172991345 172991367 -80265216 + AT_rich Low_complexity Low_complexity 1 22 0 396 0 0 0 chr2 172991828 172991872 -80264711 + (TTCA)n Simple_repeat Simple_repeat 2 45 0 294 252 107 0 chr2 172991983 172992114 -80264469 - L1ME4a LINE L1 -2 6119 5975 316 192 0 14 chr2 172992271 172992344 -80264239 - L1ME4a LINE L1 -248 5873 5802 2471 171 48 45 chr2 172992586 172993147 -80263436 + L1MB3 LINE L1 5613 6175 -8 229 325 95 16 chr2 172993309 172993435 -80263148 + MIR SINE MIR 19 154 -108 28 48 0 0 chr2 172993469 172993511 -80263072 + AT_rich Low_complexity Low_complexity 1 42 0 244 321 107 18 chr2 172993953 172994121 -80262462 - L2 LINE L2 -194 3078 2896 208 347 40 0 chr2 172994316 172994391 -80262192 - L2 LINE L2 -665 2649 2572 731 109 0 0 chr2 172994841 172994942 -80261641 - AluSg/x SINE Alu -25 287 187 300 381 119 0 chr2 172994982 172995116 -80261467 - L2 LINE L2 0 3272 3123 501 234 36 9 chr2 172995170 172995281 -80261302 - MER81 DNA DNA 0 114 1 34 0 0 0 chr2 172996107 172996141 -80260442 + AT_rich Low_complexity Low_complexity 1 34 0 262 290 0 14 chr2 172996529 172996598 -80259985 + CT-rich Low_complexity Low_complexity 3 70 0 264 309 85 0 chr2 172996615 172996709 -80259874 - L2 LINE L2 -20 3293 3192 183 42 0 0 chr2 172997143 172997167 -80259416 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 395 242 34 64 chr2 172997255 172997427 -80259156 + MLT1J LTR MaLR 291 437 -74 2540 307 146 19 chr2 172997502 172998911 -80257672 - L2 LINE L2 -657 2657 1070 347 263 158 15 chr2 173000395 173000528 -80256055 + MIR3 SINE MIR 21 172 -36 22 0 0 0 chr2 173000630 173000652 -80255931 + AT_rich Low_complexity Low_complexity 1 22 0 65 56 0 0 chr2 173000989 173001096 -80255487 + AT_rich Low_complexity Low_complexity 1 107 0 1887 171 3 3 chr2 173001157 173001466 -80255117 - AluJb SINE Alu -3 309 1 2125 105 3 16 chr2 173001649 173001954 -80254629 - AluSx SINE Alu -11 301 1 186 339 65 0 chr2 173002729 173002791 -80253792 - L2 LINE L2 0 3272 3207 311 344 65 62 chr2 173003737 173004028 -80252555 - L2 LINE L2 -516 2798 2507 182 138 0 0 chr2 173004130 173004159 -80252424 + L2 LINE L2 3243 3271 -1 216 200 0 0 chr2 173004767 173004812 -80251771 + (CA)n Simple_repeat Simple_repeat 1 45 0 282 280 70 31 chr2 173004906 173005014 -80251569 + MIR SINE MIR 3 118 -90 1771 259 102 50 chr2 173005645 173006856 -80249727 + L1MC4a LINE L1 2110 3383 -2763 2311 93 0 31 chr2 173006995 173007318 -80249265 + AluSq SINE Alu 1 313 0 617 196 45 58 chr2 173007336 173007560 -80249023 + L1MC4a LINE L1 3716 3936 -2210 314 234 45 9 chr2 173007603 173007714 -80248869 + L1MC4a LINE L1 4394 4508 -1638 185 333 265 0 chr2 173007724 173007886 -80248697 + MIR SINE MIR 48 252 -10 936 242 18 81 chr2 173008517 173008790 -80247793 + MIR SINE MIR 2 257 -5 253 354 66 22 chr2 173008886 173009067 -80247516 + MIR SINE MIR 64 252 -10 239 242 87 52 chr2 173009576 173009828 -80246755 + L1MC4a LINE L1 4995 5255 -891 298 262 94 13 chr2 173010077 173010226 -80246357 + L1MC4a LINE L1 5735 5895 -1913 2371 79 0 0 chr2 173010454 173010746 -80245837 + AluY SINE Alu 1 292 -19 387 292 135 34 chr2 173010759 173011026 -80245557 + L1ME4a LINE L1 5547 5840 -281 2103 125 0 7 chr2 173012125 173012421 -80244162 - AluSx SINE Alu -18 294 1 2051 103 50 4 chr2 173013501 173013782 -80242801 - AluSx SINE Alu -18 294 1 25 0 0 0 chr2 173014156 173014181 -80242402 + AT_rich Low_complexity Low_complexity 1 25 0 219 288 113 0 chr2 173014633 173014713 -80241870 - MIR SINE MIR -45 217 129 374 0 22 0 chr2 173015115 173015161 -80241422 + (TG)n Simple_repeat Simple_repeat 2 48 0 1291 193 83 4 chr2 173016473 173016727 -80239856 + AluJo SINE Alu 16 289 -23 25 0 0 0 chr2 173016917 173016942 -80239641 + AT_rich Low_complexity Low_complexity 1 25 0 2250 110 0 7 chr2 173017334 173017634 -80238949 - AluSx SINE Alu -12 300 3 231 325 88 44 chr2 173018584 173018698 -80237885 - MER5B DNA MER1_type -4 174 56 2392 62 0 3 chr2 173018760 173019052 -80237531 - AluY SINE Alu -20 291 1 224 232 96 0 chr2 173019415 173019508 -80237075 - MIR SINE MIR -58 204 101 24 32 0 0 chr2 173020208 173020239 -80236344 + AT_rich Low_complexity Low_complexity 1 31 0 40 21 0 0 chr2 173021203 173021250 -80235333 + AT_rich Low_complexity Low_complexity 1 47 0 1112 240 90 95 chr2 173021596 173022162 -80234421 + MER21B LTR ERV1 144 706 -157 1386 56 36 31 chr2 173022287 173022482 -80234101 - L1PB1 LINE L1 0 6151 5956 4377 120 9 19 chr2 173022799 173023499 -80233084 + L1PB3 LINE L1 5255 5947 -207 2179 100 13 3 chr2 173023922 173024221 -80232362 - AluY SINE Alu -9 302 1 1973 139 0 16 chr2 173024223 173024532 -80232051 - AluJb SINE Alu -8 304 1 679 248 122 56 chr2 173026732 173027035 -80229548 + L2 LINE L2 2652 2974 -340 2936 96 23 0 chr2 173027051 173027448 -80229135 + MLT2A2 LTR ERVL 1 406 -47 356 268 0 0 chr2 173027453 173027570 -80229013 + L1MC3 LINE L1 6571 6703 -1131 187 588 0 0 chr2 173027792 173027877 -80228706 + G-rich Low_complexity Low_complexity 1 85 0 625 55 33 60 chr2 173028060 173028243 -80228340 + (TA)n Simple_repeat Simple_repeat 2 179 0 569 303 142 11 chr2 173028249 173028516 -80228067 + L2 LINE L2 3008 3309 -4 1083 322 179 56 chr2 173028581 173029786 -80226797 + L3 LINE CR1 223 1576 -1 22 35 0 0 chr2 173031292 173031321 -80225262 + AT_rich Low_complexity Low_complexity 1 29 0 306 0 0 0 chr2 173031599 173031633 -80224950 + (TG)n Simple_repeat Simple_repeat 2 35 0 21 36 0 0 chr2 173033951 173033979 -80222604 + AT_rich Low_complexity Low_complexity 1 28 0 316 243 27 68 chr2 173034175 173034323 -80222260 + L1MC5 LINE L1 3732 3873 -2273 427 317 101 13 chr2 173034530 173034757 -80221826 + MLT1H LTR MaLR 1 247 -302 319 235 40 82 chr2 173034864 173035019 -80221564 + MLT1E LTR MaLR 399 581 0 1372 116 14 5 chr2 173035181 173035396 -80221187 + AluSp SINE Alu 96 312 -1 506 234 101 57 chr2 173035507 173035755 -80220828 + L1MC5 LINE L1 5353 5611 -2197 421 316 168 40 chr2 173035756 173036155 -80220428 + MLT1J2 LTR MaLR 1 450 0 237 302 49 58 chr2 173036159 173036364 -80220219 + L1MC5 LINE L1 5613 5815 -1993 6220 181 34 18 chr2 173036371 173038488 -80218095 + L1MC1 LINE L1 4180 6333 0 21 36 0 0 chr2 173038605 173038633 -80217950 + AT_rich Low_complexity Low_complexity 1 28 0 468 0 0 0 chr2 173038638 173038690 -80217893 + (CA)n Simple_repeat Simple_repeat 1 52 0 2036 230 45 69 chr2 173038736 173039566 -80217017 + L1MC5 LINE L1 6688 7497 -464 221 217 0 29 chr2 173039583 173039652 -80216931 + GA-rich Low_complexity Low_complexity 6 72 0 626 201 64 61 chr2 173039682 173039946 -80216637 + L1MC5 LINE L1 7511 7775 -186 730 263 22 22 chr2 173040466 173040694 -80215889 + L2 LINE L2 2207 2434 -880 851 242 6 6 chr2 173040699 173040877 -80215706 + MIR SINE MIR 12 189 -73 1192 269 114 22 chr2 173040944 173041675 -80214908 + L2 LINE L2 2428 3231 -82 326 253 112 46 chr2 173042503 173042744 -80213839 + L1ME4a LINE L1 5614 5870 -251 830 323 134 19 chr2 173043280 173043838 -80212745 + L2 LINE L2 2694 3310 -3 260 389 75 24 chr2 173044999 173045251 -80211332 + L2 LINE L2 2200 2464 -850 204 312 8 88 chr2 173045683 173045808 -80210775 + L2 LINE L2 2945 3059 -213 315 154 0 0 chr2 173045839 173045891 -80210692 + MIR SINE MIR 211 262 0 285 253 24 12 chr2 173046075 173046158 -80210425 + GA-rich Low_complexity Low_complexity 4 87 0 21 0 0 0 chr2 173046574 173046595 -80209988 + AT_rich Low_complexity Low_complexity 1 21 0 1308 187 84 30 chr2 173046661 173046911 -80209672 - Charlie5 DNA MER1_type -2 2622 2344 2238 74 0 45 chr2 173046911 173047222 -80209361 + AluY SINE Alu 1 297 -14 1308 187 84 30 chr2 173047222 173047340 -80209243 - Charlie5 DNA MER1_type -280 2344 2234 268 96 0 0 chr2 173047348 173047400 -80209183 - Charlie5 DNA MER1_type -2490 122 71 1884 94 23 23 chr2 173047423 173047688 -80208895 + AluSq SINE Alu 1 265 -48 231 36 0 0 chr2 173048033 173048061 -80208522 + (TA)n Simple_repeat Simple_repeat 2 29 0 721 160 15 8 chr2 173049588 173049719 -80206864 - FLAM_C SINE Alu 0 133 2 1850 128 48 3 chr2 173051482 173051771 -80204812 - AluSx SINE Alu -7 305 4 210 284 81 14 chr2 173052177 173052251 -80204332 + MIR SINE MIR 117 195 -67 385 257 53 58 chr2 173052520 173052691 -80203892 - L2 LINE L2 -2 3311 3142 1326 199 111 0 chr2 173053013 173053320 -80203263 + MER58B DNA MER1_type 1 341 0 648 265 54 15 chr2 173053609 173053813 -80202770 + L2 LINE L2 3102 3313 0 370 254 109 0 chr2 173053834 173053944 -80202639 + L2 LINE L2 3190 3311 -2 237 178 0 0 chr2 173054507 173054552 -80202031 + (CCCG)n Simple_repeat Simple_repeat 3 47 0 205 258 96 21 chr2 173056567 173056657 -80199926 + MIR SINE MIR 44 140 -68 1454 163 34 90 chr2 173056751 173057108 -80199475 - MER1B DNA MER1_type 0 337 1 4206 154 42 27 chr2 173057269 173058490 -80198093 - pTR5 LTR ERV1 -259 1683 31 423 318 127 0 chr2 173058496 173058669 -80197914 + MIR SINE MIR 67 261 -1 911 228 141 6 chr2 173059156 173059464 -80197119 + MER57A LTR ERV1 78 403 0 184 342 66 13 chr2 173059575 173059651 -80196932 + MIR SINE MIR 36 115 -93 2083 131 3 0 chr2 173059667 173059957 -80196626 + AluSx SINE Alu 1 291 -21 8438 179 32 12 chr2 173059961 173062126 -80194457 - L1MA4 LINE L1 -7 7712 5591 2352 79 0 0 chr2 173062126 173062418 -80194165 + AluY SINE Alu 1 292 -19 8438 179 32 12 chr2 173062418 173062582 -80194001 - L1MA4 LINE L1 -2128 5591 5432 1455 84 0 5 chr2 173062582 173062773 -80193810 - AluSg/x SINE Alu -5 307 118 8438 179 32 12 chr2 173062773 173063911 -80192672 - L1MA4 LINE L1 -2287 5432 4181 818 240 0 28 chr2 173063912 173064091 -80192492 - FRAM SINE Alu -3 173 1 5217 228 46 14 chr2 173064103 173066212 -80190371 - L1MA4 LINE L1 -3384 4181 2008 2142 62 0 18 chr2 173066261 173066536 -80190047 - AluY SINE Alu -41 270 1 249 186 62 78 chr2 173066716 173066845 -80189738 - L1MC4 LINE L1 -2 8040 7914 933 211 45 0 chr2 173066913 173067112 -80189471 - MER3 DNA MER1_type 0 209 2 2670 85 0 25 chr2 173067474 173067650 -80188933 + THE1A LTR MaLR 1 165 -190 2200 83 0 13 chr2 173067650 173067950 -80188633 - AluY SINE Alu -1 310 15 2670 85 0 25 chr2 173067950 173068137 -80188446 + THE1A LTR MaLR 165 355 0 11303 99 11 1 chr2 173068137 173069700 -80186883 + THE1A-int LTR MaLR 1 1580 0 2517 105 3 0 chr2 173069701 173070054 -80186529 + THE1A LTR MaLR 2 355 0 255 154 0 0 chr2 173070337 173070376 -80186207 - MER5A DNA MER1_type 0 189 151 243 244 64 0 chr2 173070376 173070454 -80186129 - L1MA8 LINE L1 -142 6149 6067 641 174 28 0 chr2 173070454 173070598 -80185985 + L1MA8 LINE L1 6140 6287 -4 891 177 6 24 chr2 173070632 173070796 -80185787 - MER5A DNA MER1_type -28 161 1 6133 188 32 16 chr2 173071153 173072361 -80184222 + L1M3f LINE L1 1 1228 -4100 28886 120 15 64 chr2 173072369 173078805 -80177778 + L1PA8 LINE L1 2 6100 -72 1953 172 42 0 chr2 173078787 173079547 -80177036 + L1MA4 LINE L1 5429 6295 -5 * 265 283 38 57 chr2 173079994 173080100 -80176483 - MIR3 SINE MIR -17 191 88 1779 198 17 6 chr2 173080553 173080912 -80175671 + MLT1A1 LTR MaLR 3 365 0 831 122 0 36 chr2 173080912 173081051 -80175532 + MLT1A1-int LTR MaLR 1 134 -1601 294 277 50 0 chr2 173081172 173081273 -80175310 - L3b LINE CR1 -335 1248 1143 460 226 29 0 chr2 173082165 173082267 -80174316 - MER94 DNA DNA -4 130 26 3549 129 17 72 chr2 173082540 173082925 -80173658 - L1PB3 LINE L1 -1 6153 5823 1361 96 5 10 chr2 173082925 173083123 -80173460 - MER107 DNA MER1_type 0 197 1 3549 129 17 72 chr2 173083123 173083449 -80173134 - L1PB3 LINE L1 -331 5823 5481 647 256 175 19 chr2 173083746 173083957 -80172626 - MIR SINE MIR -6 256 13 2162 120 0 0 chr2 173084034 173084334 -80172249 + AluSx SINE Alu 1 300 -12 1861 119 30 10 chr2 173084694 173084997 -80171586 + AluSc SINE Alu 1 309 0 23 33 0 0 chr2 173085459 173085489 -80171094 + AT_rich Low_complexity Low_complexity 1 30 0 476 194 5 43 chr2 173086149 173086335 -80170248 + GA-rich Low_complexity Low_complexity 2 180 0 203 300 0 0 chr2 173087603 173087663 -80168920 + (CATA)n Simple_repeat Simple_repeat 4 63 0 3274 214 95 22 chr2 173087671 173088614 -80167969 - L1MC4 LINE L1 -142 7900 6889 1317 276 109 11 chr2 173089194 173089662 -80166921 - LTR33 LTR ERVL -7 514 1 360 0 0 0 chr2 173089902 173089942 -80166641 + (TG)n Simple_repeat Simple_repeat 1 40 0 21 0 0 0 chr2 173090393 173090414 -80166169 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 173092096 173092124 -80164459 + AT_rich Low_complexity Low_complexity 1 28 0 30 59 0 0 chr2 173093420 173093471 -80163112 + AT_rich Low_complexity Low_complexity 1 51 0 279 0 0 0 chr2 173094054 173094085 -80162498 + (TG)n Simple_repeat Simple_repeat 1 31 0 252 305 128 20 chr2 173094543 173094746 -80161837 + L2 LINE L2 2129 2353 -961 258 254 0 0 chr2 173094883 173094946 -80161637 + L1ME4a LINE L1 5967 6029 -92 279 0 0 0 chr2 173095524 173095555 -80161028 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 227 364 63 28 chr2 173097146 173097289 -80159294 - MIR SINE MIR -55 207 60 240 276 0 0 chr2 173097701 173097777 -80158806 + L1P LINE L1 5323 5398 -756 237 254 36 18 chr2 173098039 173098149 -80158434 + L1ME LINE L1 5682 5793 -328 33 25 0 0 chr2 173099342 173099382 -80157201 + AT_rich Low_complexity Low_complexity 1 40 0 776 162 0 21 chr2 173102015 173102157 -80154426 - FLAM_C SINE Alu 0 143 5 23 33 0 0 chr2 173102568 173102598 -80153985 + AT_rich Low_complexity Low_complexity 1 30 0 468 55 0 14 chr2 173102753 173102826 -80153757 - AluSp/q SINE Alu -4 309 238 32 67 0 0 chr2 173104056 173104116 -80152467 + AT_rich Low_complexity Low_complexity 1 60 0 263 356 19 0 chr2 173105783 173105887 -80150696 - MIR3 SINE MIR 0 208 103 229 97 0 0 chr2 173109383 173109414 -80147169 - L1ME4a LINE L1 -104 6017 5987 23 0 0 0 chr2 173109711 173109734 -80146849 + AT_rich Low_complexity Low_complexity 1 23 0 207 0 0 0 chr2 173113486 173113509 -80143074 + (T)n Simple_repeat Simple_repeat 1 23 0 204 194 0 0 chr2 173113910 173113946 -80142637 + CT-rich Low_complexity Low_complexity 2 37 0 23 68 0 0 chr2 173113993 173114037 -80142546 + AT_rich Low_complexity Low_complexity 1 44 0 240 256 0 0 chr2 173115555 173115641 -80140942 + GA-rich Low_complexity Low_complexity 3 88 0 238 264 0 42 chr2 173116884 173116956 -80139627 + GA-rich Low_complexity Low_complexity 3 71 0 184 222 0 0 chr2 173117541 173117586 -80138997 - L2 LINE L2 0 3313 3269 2482 60 0 0 chr2 173120783 173121083 -80135500 - AluY SINE Alu -11 300 1 23 33 0 0 chr2 173122408 173122438 -80134145 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr2 173122796 173122825 -80133758 + AT_rich Low_complexity Low_complexity 1 29 0 511 269 0 0 chr2 173122838 173122946 -80133637 + FLAM_A SINE Alu 21 128 -14 864 216 6 6 chr2 173123422 173123584 -80132999 + MLT1E LTR MaLR 1 162 -431 305 315 138 0 chr2 173124263 173124393 -80132190 + MIR3 SINE MIR 56 203 -5 777 151 60 128 chr2 173124591 173124655 -80131928 + AluJo SINE Alu 83 150 -166 2311 78 3 3 chr2 173124655 173124949 -80131634 - AluSq SINE Alu -19 294 1 777 151 60 128 chr2 173124949 173125133 -80131450 + AluJo SINE Alu 150 316 0 209 167 21 21 chr2 173125356 173125404 -80131179 + T-rich Low_complexity Low_complexity 2 49 0 1727 154 35 0 chr2 173125540 173125825 -80130758 - AluJb SINE Alu -15 297 3 1419 211 176 82 chr2 173125932 173126530 -80130053 - MLT1E1 LTR MaLR 0 654 1 351 314 58 11 chr2 173126826 173127017 -80129566 - L1M4 LINE L1 -3261 2885 2686 2170 70 0 0 chr2 173127545 173127816 -80128767 - AluY SINE Alu 0 311 41 268 178 27 0 chr2 173128438 173128511 -80128072 + (TA)n Simple_repeat Simple_repeat 1 75 0 352 326 108 15 chr2 173129369 173129531 -80127052 + MIR SINE MIR 35 214 -48 405 329 89 50 chr2 173129629 173129909 -80126674 - L2 LINE L2 -37 3235 2945 290 339 116 16 chr2 173129956 173130266 -80126317 - L2 LINE L2 -424 2890 2550 413 299 120 34 chr2 173131030 173131264 -80125319 + MIR SINE MIR 7 260 -2 26 0 0 0 chr2 173131404 173131430 -80125153 + AT_rich Low_complexity Low_complexity 1 26 0 195 273 71 50 chr2 173131496 173131595 -80124988 - MIR SINE MIR -74 188 88 225 254 0 51 chr2 173131649 173131708 -80124875 - L2 LINE L2 -14 3258 3203 508 284 123 19 chr2 173132581 173132792 -80123791 - MIR SINE MIR 0 262 30 303 28 0 0 chr2 173133073 173133109 -80123474 + (CA)n Simple_repeat Simple_repeat 1 36 0 230 328 75 46 chr2 173133538 173133712 -80122871 + L3 LINE CR1 792 970 -607 463 94 0 0 chr2 173134303 173134367 -80122216 + Alu SINE Alu 1 64 -245 1382 200 20 83 chr2 173135519 173135914 -80120669 + MLT1A2 LTR MaLR 1 370 -4 322 284 163 7 chr2 173136019 173136161 -80120422 + MIR SINE MIR 30 189 -66 1254 186 8 0 chr2 173136386 173136622 -80119961 - Tigger5 DNA MER2_type -1 2322 2085 * 1282 181 12 52 chr2 173136612 173136860 -80119723 - Tigger5 DNA MER2_type -2085 238 1 203 161 0 0 chr2 173136860 173136891 -80119692 + (TATATG)n Simple_repeat Simple_repeat 4 34 0 252 368 75 17 chr2 173137517 173137691 -80118892 + MIR3 SINE MIR 14 197 -11 709 12 0 0 chr2 173138529 173138614 -80117969 - L1PA2 LINE L1 -4 6151 6067 1843 137 51 0 chr2 173139218 173139511 -80117072 - AluSx SINE Alu -4 308 1 487 341 24 12 chr2 173140615 173140785 -80115798 - MIR SINE MIR -50 212 41 2502 46 20 0 chr2 173140786 173141091 -80115492 - AluY SINE Alu 0 311 1 27 29 0 0 chr2 173143523 173143557 -80113026 + AT_rich Low_complexity Low_complexity 1 34 0 231 36 0 0 chr2 173145165 173145193 -80111390 + (CA)n Simple_repeat Simple_repeat 2 29 0 180 324 88 60 chr2 173145536 173145718 -80110865 - MIR3 SINE MIR -1 207 21 3596 74 12 2 chr2 173149068 173149553 -80107030 - L1PA12 LINE L1 0 6168 5679 203 267 0 0 chr2 173149700 173149745 -80106838 + (CATA)n Simple_repeat Simple_repeat 2 46 0 27 29 0 0 chr2 173151147 173151181 -80105402 + AT_rich Low_complexity Low_complexity 1 34 0 200 200 22 22 chr2 173151225 173151270 -80105313 - MIR3 SINE MIR -7 201 157 911 127 19 57 chr2 173151459 173151487 -80105096 - AluJo SINE Alu -161 151 123 270 81 0 0 chr2 173151487 173151524 -80105059 + (TA)n Simple_repeat Simple_repeat 2 38 0 911 127 19 57 chr2 173151524 173151652 -80104931 - AluJo SINE Alu -189 123 1 25 31 0 0 chr2 173152203 173152235 -80104348 + AT_rich Low_complexity Low_complexity 1 32 0 1169 86 40 0 chr2 173152402 173152576 -80104007 - L1MA2 LINE L1 0 6304 6124 217 321 0 24 chr2 173154858 173154942 -80101641 + GA-rich Low_complexity Low_complexity 2 83 0 22 35 0 0 chr2 173154971 173155000 -80101583 + AT_rich Low_complexity Low_complexity 1 29 0 207 167 0 0 chr2 173155219 173155261 -80101322 + (TG)n Simple_repeat Simple_repeat 1 42 0 23 33 0 0 chr2 173156320 173156350 -80100233 + AT_rich Low_complexity Low_complexity 1 30 0 346 127 113 0 chr2 173156454 173156525 -80100058 - MADE1 DNA Mariner -1 79 1 456 270 32 8 chr2 173157492 173157618 -80098965 + MIR SINE MIR 92 220 -42 406 263 10 101 chr2 173157999 173158197 -80098386 + MIR SINE MIR 78 257 -5 212 301 60 12 chr2 173158207 173158290 -80098293 - MIR3 SINE MIR -5 203 117 21 0 0 0 chr2 173159227 173159248 -80097335 + AT_rich Low_complexity Low_complexity 1 21 0 498 246 95 0 chr2 173160826 173161005 -80095578 + MER5C DNA MER1_type 56 251 -73 2122 103 0 39 chr2 173161449 173161761 -80094822 + AluSq SINE Alu 1 300 -13 21 0 0 0 chr2 173161804 173161825 -80094758 + AT_rich Low_complexity Low_complexity 1 21 0 1975 130 36 0 chr2 173162253 173162583 -80094000 + L1MA5A LINE L1 5953 6294 -3 820 178 145 79 chr2 173164505 173164809 -80091774 - MER33 DNA MER1_type 0 324 1 519 314 51 0 chr2 173165008 173165164 -80091419 + MIR SINE MIR 17 180 -82 290 333 111 29 chr2 173165339 173165546 -80091037 - L3 LINE CR1 -1167 410 187 293 265 72 54 chr2 173166691 173166857 -80089726 - Charlie8 DNA MER1_type -2238 179 11 365 253 122 46 chr2 173167191 173167359 -80089224 + MIR SINE MIR 31 214 -48 306 348 60 22 chr2 173167654 173167838 -80088745 + L2 LINE L2 2671 2861 -453 227 303 157 0 chr2 173167875 173167964 -80088619 + L2 LINE L2 2942 3044 -228 24 32 0 0 chr2 173168154 173168185 -80088398 + AT_rich Low_complexity Low_complexity 1 31 0 782 277 60 78 chr2 173168582 173169029 -80087554 + MLT1K LTR MaLR 13 451 -137 184 239 0 60 chr2 173170551 173170618 -80085965 - L2 LINE L2 -1606 1708 1646 229 333 0 0 chr2 173171216 173171279 -80085304 - U1 snRNA snRNA -96 69 7 2370 75 0 0 chr2 173172482 173172788 -80083795 + AluY SINE Alu 1 306 -5 288 77 0 0 chr2 173173656 173173695 -80082888 + (TTCC)n Simple_repeat Simple_repeat 1 39 0 2062 101 10 13 chr2 173173704 173174011 -80082572 - AluSc SINE Alu -3 306 1 1144 309 44 19 chr2 173176284 173176857 -80079726 - L1MC4a LINE L1 -1887 5921 5335 2168 256 12 2 chr2 173177254 173177833 -80078750 + L1MC1 LINE L1 4479 5063 -1083 871 137 6 48 chr2 173177856 173178024 -80078559 - L1M3f LINE L1 -5165 163 3 * 4691 141 10 9 chr2 173178022 173179092 -80077491 + L1MC1 LINE L1 5077 7663 -122 613 187 97 8 chr2 173179306 173179440 -80077143 + L1MC1 LINE L1 6187 6332 -1 385 340 64 10 chr2 173179512 173179715 -80076868 + L1M4 LINE L1 4487 4700 -1446 301 310 70 36 chr2 173179729 173180346 -80076237 - L1M4 LINE L1 -3243 2903 2266 22 0 0 0 chr2 173180661 173180683 -80075900 + AT_rich Low_complexity Low_complexity 1 22 0 24 53 0 0 chr2 173180802 173180840 -80075743 + AT_rich Low_complexity Low_complexity 1 38 0 254 367 0 13 chr2 173183147 173183226 -80073357 - MIR SINE MIR -104 104 27 2217 189 60 9 chr2 173185613 173186048 -80070535 + LTR32 LTR ERVL 15 471 0 4292 141 56 1 chr2 173186916 173187595 -80068988 + MER72 LTR ERV1 7 722 0 2135 148 30 50 chr2 173187857 173188059 -80068524 + MSTB1 LTR MaLR 1 206 -226 2071 110 3 27 chr2 173188059 173188358 -80068225 + AluSp SINE Alu 1 292 -21 2135 148 30 50 chr2 173188358 173188594 -80067989 + MSTB1 LTR MaLR 206 430 -2 183 309 29 0 chr2 173188615 173188683 -80067900 - L2 LINE L2 -1 3312 3243 300 27 0 0 chr2 173188923 173188960 -80067623 + (TG)n Simple_repeat Simple_repeat 2 38 0 715 198 43 32 chr2 173189807 173189892 -80066691 - MER53 DNA DNA 0 189 106 1517 71 28 5 chr2 173189892 173190104 -80066479 - L1PA7 LINE L1 0 6154 5938 715 198 43 32 chr2 173190104 173190205 -80066378 - MER53 DNA DNA -83 106 1 204 40 0 0 chr2 173190879 173190904 -80065679 + (TTCC)n Simple_repeat Simple_repeat 1 25 0 1613 190 30 0 chr2 173190904 173191204 -80065379 - AluJo SINE Alu -2 310 2 205 200 80 0 chr2 173192705 173192755 -80063828 + L2 LINE L2 3219 3272 0 444 264 35 58 chr2 173193068 173193242 -80063341 - MER5A DNA MER1_type -19 170 1 682 212 7 7 chr2 173193401 173193538 -80063045 - AluJo SINE Alu -173 139 3 250 403 7 19 chr2 173193597 173193751 -80062832 + MIR SINE MIR 19 170 -92 2257 94 0 16 chr2 173194209 173194517 -80062066 - AluY SINE Alu -8 303 1 463 324 61 24 chr2 173195945 173196192 -80060391 - L3b LINE CR1 -224 1359 1104 2237 91 3 0 chr2 173197158 173197454 -80059129 - AluSg SINE Alu -13 297 1 1583 161 4 4 chr2 173197885 173198158 -80058425 - AluSx SINE Alu -1 311 39 1501 200 11 7 chr2 173198475 173198755 -80057828 - AluJo SINE Alu -31 281 1 7997 174 20 11 chr2 173198912 173200015 -80056568 + L1PA16 LINE L1 3659 4750 -1416 13576 23 5 0 chr2 173200015 173202397 -80054186 + L1PA2 LINE L1 3768 6155 0 7997 174 20 11 chr2 173202397 173203089 -80053494 + L1PA16 LINE L1 4750 5479 -687 2383 76 0 16 chr2 173203089 173203405 -80053178 + AluY SINE Alu 1 311 0 7997 174 20 11 chr2 173203405 173203785 -80052798 + L1PA16 LINE L1 5479 5854 -312 2029 114 0 0 chr2 173204043 173204370 -80052213 + AluSx SINE Alu 1 327 0 192 227 23 0 chr2 173204715 173204759 -80051824 - MIR SINE MIR -108 154 110 188 254 127 0 chr2 173204869 173204932 -80051651 + L2 LINE L2 3201 3271 -1 268 328 81 11 chr2 173205149 173205335 -80051248 - L2 LINE L2 -1293 2021 1823 1834 169 3 0 chr2 173205335 173205631 -80050952 + AluJb SINE Alu 1 297 -15 341 165 111 128 chr2 173206744 173206780 -80049803 - LTR41 LTR ERVL -1 794 759 2420 71 0 0 chr2 173206780 173207089 -80049494 + AluY SINE Alu 1 309 -2 341 165 111 128 chr2 173207089 173207284 -80049299 - LTR41 LTR ERVL -36 759 544 588 247 60 0 chr2 173207678 173207844 -80048739 - LTR41 LTR ERVL -595 178 3 248 235 0 0 chr2 173208135 173208186 -80048397 - LTR11 LTR ERV -207 477 427 4027 206 25 23 chr2 173208560 173209796 -80046787 + L1MB7 LINE L1 4867 6117 -67 5875 120 21 41 chr2 173210319 173210739 -80045844 + Tigger1 DNA MER2_type 1 428 -1990 1563 121 29 77 chr2 173210739 173211052 -80045531 + L1MA3 LINE L1 6008 6305 0 5875 120 21 41 chr2 173211052 173211591 -80044992 + Tigger1 DNA MER2_type 428 941 -1477 2750 93 0 8 chr2 173211591 173211958 -80044625 + THE1B LTR MaLR 1 364 0 10163 111 10 5 chr2 173211958 173213432 -80043151 + Tigger1 DNA MER2_type 938 2418 0 336 193 0 102 chr2 173213432 173213518 -80043065 + MER21B LTR ERV1 20 96 -767 1647 208 339 9 chr2 173213520 173214063 -80042520 + MER21B LTR ERV1 18 739 -124 231 36 0 0 chr2 173214083 173214111 -80042472 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 191 158 26 0 chr2 173214223 173214261 -80042322 + L2 LINE L2 3273 3311 -2 751 256 6 0 chr2 173214570 173214750 -80041833 + L1PB4 LINE L1 5969 6149 -7 24 32 0 0 chr2 173214750 173214781 -80041802 + AT_rich Low_complexity Low_complexity 1 31 0 242 250 77 0 chr2 173215582 173215686 -80040897 + L1ME LINE L1 5761 5872 -249 1952 133 27 13 chr2 173215958 173216258 -80040325 + AluSq SINE Alu 1 304 -9 22 35 0 0 chr2 173216453 173216482 -80040101 + AT_rich Low_complexity Low_complexity 1 29 0 465 242 69 17 chr2 173217548 173217779 -80038804 - Charlie1a DNA MER1_type -12 1443 1201 3013 219 70 12 chr2 173217784 173218311 -80038272 - Charlie1a DNA MER1_type -1962 799 213 201 74 0 0 chr2 173218311 173218338 -80038245 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 3013 219 70 12 chr2 173218338 173218565 -80038018 - Charlie1a DNA MER1_type -2548 213 1 1879 89 124 0 chr2 173218589 173218848 -80037735 + AluSg SINE Alu 1 291 -19 183 100 0 0 chr2 173219019 173219049 -80037534 + (GA)n Simple_repeat Simple_repeat 2 31 0 441 84 0 0 chr2 173219177 173219248 -80037335 - Alu SINE Alu -2 310 240 453 89 0 63 chr2 173219770 173219849 -80036734 - MER1B DNA MER1_type -1 338 265 1645 112 0 0 chr2 173219851 173220074 -80036509 - MER1B DNA MER1_type -73 224 2 23 33 0 0 chr2 173220878 173220908 -80035675 + AT_rich Low_complexity Low_complexity 1 30 0 408 285 116 26 chr2 173221161 173221463 -80035120 - L1ME4a LINE L1 -69 6052 5724 2239 110 0 28 chr2 173221471 173221790 -80034793 - AluSx SINE Alu -2 310 1 258 105 0 0 chr2 173221984 173222022 -80034561 + (A)n Simple_repeat Simple_repeat 1 38 0 278 233 35 12 chr2 173222156 173222242 -80034341 + LTR67 LTR ERVL 445 532 -25 1790 193 37 5 chr2 173222649 173223027 -80033556 + MLT1B LTR MaLR 1 390 0 1259 228 11 15 chr2 173223470 173223824 -80032759 + L1M4 LINE L1 4860 5205 -941 342 0 0 0 chr2 173224098 173224136 -80032447 + (A)n Simple_repeat Simple_repeat 1 38 0 23 0 0 0 chr2 173224342 173224365 -80032218 + AT_rich Low_complexity Low_complexity 1 23 0 786 77 0 0 chr2 173224370 173224474 -80032109 - HY1 scRNA scRNA -6 106 3 366 298 107 22 chr2 173224902 173225080 -80031503 + L2 LINE L2 3070 3262 -51 22 0 0 0 chr2 173225114 173225136 -80031447 + AT_rich Low_complexity Low_complexity 1 22 0 2021 118 7 0 chr2 173225141 173225451 -80031132 + AluSx SINE Alu 1 312 0 782 211 106 29 chr2 173225613 173225821 -80030762 + MIR SINE MIR 18 241 -21 193 264 38 0 chr2 173225788 173225841 -80030742 + L2 LINE L2 3254 3308 -5 * 244 118 20 20 chr2 173228460 173228511 -80028072 + GA-rich Low_complexity Low_complexity 2 52 0 249 146 0 0 chr2 173228796 173228844 -80027739 + (CA)n Simple_repeat Simple_repeat 2 49 0 200 317 108 25 chr2 173230017 173230137 -80026446 - MIR SINE MIR -105 157 28 193 386 88 0 chr2 173230237 173230351 -80026232 + MIR3 SINE MIR 72 195 -13 367 304 54 0 chr2 173231143 173231255 -80025328 - L2 LINE L2 -1 3312 3195 21 0 0 0 chr2 173233637 173233658 -80022925 + AT_rich Low_complexity Low_complexity 1 21 0 26 30 0 0 chr2 173233897 173233930 -80022653 + AT_rich Low_complexity Low_complexity 1 33 0 513 206 16 32 chr2 173235022 173235148 -80021435 - MIR3 SINE MIR -9 199 76 181 286 0 0 chr2 173238186 173238221 -80018362 + L2 LINE L2 3247 3281 -32 2224 141 8 19 chr2 173238225 173238588 -80017995 + THE1B LTR MaLR 1 359 -5 11709 94 13 0 chr2 173238592 173240152 -80016431 + THE1B-int LTR MaLR 1 1580 0 2053 122 9 28 chr2 173240152 173240478 -80016105 + THE1B LTR MaLR 1 320 -44 1332 131 60 33 chr2 173240478 173240773 -80015810 - THE1B LTR MaLR 0 375 1 653 272 14 42 chr2 173240874 173241091 -80015492 - MIR SINE MIR -49 213 3 553 216 161 12 chr2 173241744 173241906 -80014677 + MER5A DNA MER1_type 4 189 0 22 35 0 0 chr2 173242243 173242272 -80014311 + AT_rich Low_complexity Low_complexity 1 29 0 772 167 0 0 chr2 173242286 173242406 -80014177 + FLAM_C SINE Alu 3 122 -21 408 313 15 79 chr2 173242530 173242795 -80013788 - L1MC/D LINE L1 -2020 5788 5541 2289 136 28 0 chr2 173243588 173243942 -80012641 + THE1B LTR MaLR 1 364 0 2551 54 0 0 chr2 173244042 173244339 -80012244 - AluY SINE Alu -14 297 1 184 239 43 0 chr2 173245080 173245126 -80011457 - L2 LINE L2 -4 3268 3221 182 257 114 38 chr2 173245238 173245343 -80011240 + MIR SINE MIR 93 205 -57 218 343 14 0 chr2 173245639 173245709 -80010874 + MIR SINE MIR 111 181 -81 2132 86 54 4 chr2 173245727 173246007 -80010576 - AluSg SINE Alu -14 296 3 24 0 0 0 chr2 173246014 173246038 -80010545 + AT_rich Low_complexity Low_complexity 1 24 0 2854 10 0 0 chr2 173246144 173246455 -80010128 - AluY SINE Alu 0 311 1 381 250 64 14 chr2 173246599 173246739 -80009844 - HAL1b LINE L1 -3 1345 1199 1920 149 3 3 chr2 173246798 173247094 -80009489 - AluSx SINE Alu -16 296 1 580 101 22 36 chr2 173247319 173247458 -80009125 + (CATATA)n Simple_repeat Simple_repeat 3 139 0 434 136 0 101 chr2 173247484 173247682 -80008901 + (TA)n Simple_repeat Simple_repeat 1 178 0 344 139 5 77 chr2 173247701 173247895 -80008688 + (TA)n Simple_repeat Simple_repeat 1 180 0 241 253 48 90 chr2 173247907 173248073 -80008510 - L1MC/D LINE L1 -552 5569 5411 429 286 183 43 chr2 173248712 173249201 -80007382 - L1MC/D LINE L1 -1534 4612 4051 7811 69 1 0 chr2 173251031 173252834 -80003749 + L1PA6 LINE L1 4353 6154 0 276 53 0 0 chr2 173253582 173253620 -80002963 + (TTG)n Simple_repeat Simple_repeat 1 38 0 2016 133 0 0 chr2 173253620 173253899 -80002684 - AluSx SINE Alu -33 279 1 455 297 147 30 chr2 173254367 173254599 -80001984 + MIR SINE MIR 4 262 0 2605 223 80 98 chr2 173255256 173255762 -80000821 + L1M3c LINE L1 807 1320 -5062 6951 40 9 5 chr2 173255762 173256631 -79999952 + L1PA4 LINE L1 5282 6154 -1 2605 223 80 98 chr2 173256631 173256935 -79999648 + L1M3c LINE L1 1320 1628 -4754 2037 129 3 10 chr2 173256935 173257238 -79999345 + AluSq SINE Alu 1 301 -12 2605 223 80 98 chr2 173257238 173258271 -79998312 + L1M3c LINE L1 1628 2561 -3821 777 277 11 0 chr2 173258282 173258459 -79998124 + MER8 DNA MER2_type 1 179 -60 4618 240 37 4 chr2 173258495 173259618 -79996965 + L1M3c LINE L1 2569 3744 -2638 387 60 0 0 chr2 173259618 173259668 -79996915 + (TAA)n Simple_repeat Simple_repeat 2 51 0 4618 240 37 4 chr2 173259668 173259869 -79996714 + L1M3c LINE L1 3744 3937 -2445 361 346 45 30 chr2 173259880 173260146 -79996437 + L1M3d LINE L1 2 271 -5620 671 322 103 26 chr2 173260304 173260655 -79995928 + L1MA8 LINE L1 620 997 -5656 2704 16 0 26 chr2 173260658 173260971 -79995612 - AluY SINE Alu -6 305 1 11386 195 40 18 chr2 173261080 173264124 -79992459 + L1MA8 LINE L1 3194 6386 -367 484 54 0 163 chr2 173264124 173264216 -79992367 - MADE1 DNA Mariner 0 80 4 11386 195 40 18 chr2 173264216 173264593 -79991990 + L1MA8 LINE L1 6386 6753 0 259 236 24 73 chr2 173264601 173264724 -79991859 + L1MA7 LINE L1 5940 6056 -235 6498 86 7 3 chr2 173264725 173265900 -79990683 + L1PA12 LINE L1 4990 6167 -1 892 171 22 0 chr2 173265929 173266110 -79990473 + L1MA7 LINE L1 6106 6290 -1 1372 167 13 33 chr2 173266120 173266425 -79990158 + L1M3 LINE L1 3681 3979 -2167 1206 231 80 54 chr2 173266426 173266812 -79989771 + MSTD LTR MaLR 1 396 0 5822 192 25 19 chr2 173266812 173267553 -79989030 + L1M3 LINE L1 3976 4794 -1374 1516 207 13 10 chr2 173267553 173267853 -79988730 - AluJo SINE Alu -9 303 3 5822 192 25 19 chr2 173267853 173268505 -79988078 + L1M3 LINE L1 4794 5441 -727 2153 112 7 0 chr2 173268505 173268799 -79987784 + AluSc SINE Alu 1 296 -13 2596 35 3 0 chr2 173268808 173269118 -79987465 + AluY SINE Alu 1 311 0 30 0 0 0 chr2 173270419 173270449 -79986134 + AT_rich Low_complexity Low_complexity 1 30 0 272 260 73 31 chr2 173270976 173271072 -79985511 + MIR SINE MIR 38 137 -71 431 356 57 35 chr2 173271260 173271631 -79984952 + L2 LINE L2 1968 2346 -968 251 250 250 0 chr2 173271781 173271853 -79984730 + MER5A DNA MER1_type 100 189 0 536 296 61 14 chr2 173272069 173272282 -79984301 + MIR SINE MIR 2 224 -38 618 321 130 34 chr2 173273233 173273681 -79982902 - L2 LINE L2 -1 3312 2909 1836 172 3 10 chr2 173273681 173273989 -79982594 + AluSx SINE Alu 1 306 -6 618 321 130 34 chr2 173273989 173274286 -79982297 - L2 LINE L2 -404 2909 2485 1798 93 0 0 chr2 173274895 173275120 -79981463 + AluSc SINE Alu 61 285 -24 21 0 0 0 chr2 173275374 173275395 -79981188 + AT_rich Low_complexity Low_complexity 1 21 0 243 146 0 0 chr2 173275449 173275490 -79981093 + (T)n Simple_repeat Simple_repeat 1 41 0 210 191 0 0 chr2 173275648 173275690 -79980893 + T-rich Low_complexity Low_complexity 1 42 0 2508 237 52 7 chr2 173277460 173278132 -79978451 + MER63C DNA MER1_type 2 703 -227 808 240 148 4 chr2 173278245 173278495 -79978088 + MER63C DNA MER1_type 645 930 0 464 320 83 52 chr2 173278787 173279209 -79977374 + L2 LINE L2 2449 2883 -431 24 32 0 0 chr2 173280121 173280152 -79976431 + AT_rich Low_complexity Low_complexity 1 31 0 205 333 13 0 chr2 173280488 173280563 -79976020 - L2 LINE L2 -10 3262 3187 488 182 66 41 chr2 173280571 173280692 -79975891 - LTR51 LTR ERV1 0 671 548 * 1663 191 11 31 chr2 173280662 173281013 -79975570 - MER65C LTR ERV1 -117 344 1 1748 236 26 12 chr2 173281696 173282115 -79974468 - LTR40c LTR ERVL -5 460 36 653 59 0 0 chr2 173282499 173282584 -79973999 + L1PA14 LINE L1 6076 6160 -1 436 259 127 0 chr2 173282585 173282778 -79973805 - MIR SINE MIR -2 260 45 644 60 0 0 chr2 173283605 173283688 -79972895 - AluSg/x SINE Alu -11 301 219 186 284 60 15 chr2 173284067 173284134 -79972449 - L2 LINE L2 -2 3270 3201 21 57 0 0 chr2 173285397 173285432 -79971151 + AT_rich Low_complexity Low_complexity 1 35 0 38 61 0 0 chr2 173285632 173285698 -79970885 + AT_rich Low_complexity Low_complexity 1 66 0 2267 82 0 7 chr2 173286124 173286416 -79970167 + AluSx SINE Alu 1 290 -22 29 60 0 0 chr2 173286778 173286828 -79969755 + AT_rich Low_complexity Low_complexity 1 50 0 573 255 37 37 chr2 173287195 173287383 -79969200 + MER5A DNA MER1_type 1 188 -1 221 271 0 0 chr2 173287482 173287541 -79969042 + (TA)n Simple_repeat Simple_repeat 2 60 0 1851 189 58 19 chr2 173287667 173288079 -79968504 - MSTC LTR MaLR 0 428 1 437 181 11 44 chr2 173289623 173289805 -79966778 + (TA)n Simple_repeat Simple_repeat 1 176 0 235 208 19 63 chr2 173289886 173290045 -79966538 + (TATAA)n Simple_repeat Simple_repeat 2 153 0 * 326 205 26 39 chr2 173289963 173290119 -79966464 + (TA)n Simple_repeat Simple_repeat 1 154 0 241 346 28 9 chr2 173290422 173290529 -79966054 - MIR SINE MIR -73 189 81 660 243 40 0 chr2 173290986 173291045 -79965538 + MER5A DNA MER1_type 4 59 -130 1793 99 4 8 chr2 173291045 173291298 -79965285 + AluSg SINE Alu 50 301 -9 660 243 40 0 chr2 173291298 173291386 -79965197 + MER5A DNA MER1_type 59 157 -32 218 344 144 42 chr2 173292013 173292417 -79964166 - L2 LINE L2 -3 3269 2825 590 215 134 7 chr2 173292621 173292770 -79963813 + MER58A DNA MER1_type 19 186 -38 24 0 0 0 chr2 173293326 173293350 -79963233 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr2 173293440 173293468 -79963115 + AT_rich Low_complexity Low_complexity 1 28 0 26 30 0 0 chr2 173293545 173293578 -79963005 + AT_rich Low_complexity Low_complexity 1 33 0 2294 91 0 10 chr2 173294290 173294597 -79961986 + AluSg SINE Alu 1 304 -6 225 0 0 0 chr2 173294817 173294842 -79961741 + (A)n Simple_repeat Simple_repeat 1 25 0 478 242 32 148 chr2 173295550 173295827 -79960756 + MIR SINE MIR 7 251 -11 25 0 0 0 chr2 173295836 173295861 -79960722 + AT_rich Low_complexity Low_complexity 1 25 0 23 68 0 0 chr2 173296155 173296199 -79960384 + AT_rich Low_complexity Low_complexity 1 44 0 475 262 88 6 chr2 173296985 173297063 -79959520 - MIR SINE MIR 0 262 192 1637 221 82 16 chr2 173297063 173297501 -79959082 - MLT1C LTR MaLR 0 467 1 475 262 88 6 chr2 173297501 173297616 -79958967 - MIR SINE MIR -70 192 52 3427 166 37 34 chr2 173299343 173299694 -79956889 - L1MB1 LINE L1 -3 6165 5816 186 103 0 0 chr2 173299694 173299723 -79956860 + (TG)n Simple_repeat Simple_repeat 1 29 0 3427 166 37 34 chr2 173299723 173300107 -79956476 - L1MB1 LINE L1 -352 5816 5428 216 0 0 0 chr2 173300116 173300140 -79956443 + (T)n Simple_repeat Simple_repeat 1 24 0 26 0 0 0 chr2 173300176 173300202 -79956381 + GC_rich Low_complexity Low_complexity 1 26 0 31 26 0 0 chr2 173303245 173303283 -79953300 + AT_rich Low_complexity Low_complexity 1 38 0 24 0 0 0 chr2 173304154 173304178 -79952405 + AT_rich Low_complexity Low_complexity 1 24 0 1698 159 11 7 chr2 173304271 173304554 -79952029 - AluJo SINE Alu -24 288 5 269 295 82 22 chr2 173305603 173305718 -79950865 - MIR SINE MIR -41 221 97 562 299 67 36 chr2 173305718 173305942 -79950641 + MIR SINE MIR 1 231 -31 527 202 10 0 chr2 173307573 173307672 -79948911 + MLT1E LTR MaLR 476 575 -18 233 264 33 0 chr2 173308139 173308230 -79948353 - MER103 DNA DNA -2 164 71 * 373 206 11 22 chr2 173308217 173308309 -79948274 - LTR40b LTR ERVL -74 388 298 1088 174 33 46 chr2 173308313 173308554 -79948029 - MLT1A2 LTR MaLR -1 373 136 276 91 0 0 chr2 173308562 173308606 -79947977 + (TA)n Simple_repeat Simple_repeat 2 45 0 837 200 7 7 chr2 173308732 173308887 -79947696 - MER2 DNA MER2_type -190 155 1 430 322 143 32 chr2 173308910 173309224 -79947359 + L2 LINE L2 2395 2743 -571 1033 207 9 9 chr2 173309757 173309974 -79946609 - MER20 DNA MER1_type -2 217 1 230 214 0 0 chr2 173310720 173310762 -79945821 - MER69 DNA AcHobo -2 2524 2483 23 0 0 0 chr2 173310893 173310916 -79945667 + AT_rich Low_complexity Low_complexity 1 23 0 1712 19 5 0 chr2 173310916 173311122 -79945461 - L1PA4 LINE L1 -190 5964 5758 1159 27 60 0 chr2 173311122 173311272 -79945311 + L1PA4 LINE L1 5995 6153 -2 1195 248 37 16 chr2 173312468 173312851 -79943732 + L1ME3A LINE L1 5404 5794 -368 886 172 0 0 chr2 173312863 173312997 -79943586 + FRAM SINE Alu 13 146 -30 2055 119 0 13 chr2 173313018 173313320 -79943263 - AluSx SINE Alu -14 298 1 709 223 65 47 chr2 173313346 173313692 -79942891 + L1ME3A LINE L1 5803 6160 -10 440 318 40 6 chr2 173313713 173313886 -79942697 - L1MEd LINE L1 -5869 250 72 948 299 58 58 chr2 173314511 173314759 -79941824 + L2 LINE L2 2459 2705 -608 2188 38 0 0 chr2 173314759 173315025 -79941558 + L1PA4 LINE L1 5890 6155 0 948 299 58 58 chr2 173315025 173315565 -79941018 + L2 LINE L2 2705 3252 -61 723 226 39 29 chr2 173315915 173316123 -79940460 + MER63A DNA MER1_type 1 210 0 193 310 184 0 chr2 173316220 173316307 -79940276 - MIR SINE MIR -128 134 32 680 236 22 50 chr2 173316829 173317011 -79939572 - MER5A DNA MER1_type 0 189 13 622 247 36 6 chr2 173317080 173317246 -79939337 - MER5B DNA MER1_type -3 175 5 528 175 53 0 chr2 173317266 173317380 -79939203 - L1PA16 LINE L1 0 6166 6047 2018 140 6 3 chr2 173317380 173317694 -79938889 + MER1A DNA MER1_type 215 529 0 1919 218 22 16 chr2 173317694 173318195 -79938388 - L1PA13 LINE L1 -4490 3094 2591 180 0 0 0 chr2 173318313 173318333 -79938250 + (T)n Simple_repeat Simple_repeat 1 20 0 241 338 0 0 chr2 173319185 173319265 -79937318 - L1PA13 LINE L1 -5399 2182 2103 474 204 0 0 chr2 173319296 173319399 -79937184 + 7SK RNA RNA 33 135 -58 470 164 0 0 chr2 173319433 173319506 -79937077 + 7SK RNA RNA 121 193 0 544 243 27 181 chr2 173319506 173319876 -79936707 - L1PA13 LINE L1 -6524 1061 749 234 244 78 56 chr2 173320132 173320222 -79936361 + MIR SINE MIR 38 129 -133 1756 237 0 2 chr2 173321226 173321636 -79934947 - L1MA2 LINE L1 -929 5217 4809 * 6493 130 19 6 chr2 173321629 173322696 -79933887 + L1MA2 LINE L1 5225 6304 0 264 186 194 48 chr2 173323245 173323369 -79933214 - L1ME4a LINE L1 -25 6096 5955 381 95 0 0 chr2 173323499 173323562 -79933021 + (TC)n Simple_repeat Simple_repeat 2 64 0 222 118 0 0 chr2 173324203 173324237 -79932346 + (A)n Simple_repeat Simple_repeat 1 34 0 190 430 0 0 chr2 173324655 173324734 -79931849 + L2 LINE L2 2551 2629 -685 209 33 33 0 chr2 173325813 173325843 -79930740 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 296 284 29 10 chr2 173326114 173326216 -79930367 - LTR67 LTR ERVL -26 531 428 516 310 86 102 chr2 173329369 173329891 -79926692 - L2 LINE L2 -13 3300 2765 5056 177 24 12 chr2 173329928 173331901 -79924682 - L1PA16 LINE L1 -2 6164 4137 263 260 77 39 chr2 173331917 173332021 -79924562 - L2 LINE L2 -650 2664 2557 210 269 119 0 chr2 173332108 173332175 -79924408 - L2 LINE L2 -14 3299 3225 22 0 0 0 chr2 173333186 173333208 -79923375 + AT_rich Low_complexity Low_complexity 1 22 0 246 194 15 30 chr2 173333251 173333318 -79923265 + (CATATA)n Simple_repeat Simple_repeat 4 69 0 1877 164 121 44 chr2 173334749 173335230 -79921353 + MLT2B1 LTR ERVL 3 520 0 366 314 29 21 chr2 173335318 173335458 -79921125 + LTR16A1 LTR ERVL 13 153 -304 478 326 157 47 chr2 173336144 173336527 -79920056 - L2 LINE L2 -1 3271 2847 826 279 29 85 chr2 173336592 173336968 -79919615 - LTR16A LTR ERVL -15 435 81 2388 69 10 3 chr2 173337148 173337522 -79919061 + AluY SINE Alu 1 376 0 499 360 71 44 chr2 173337522 173338069 -79918514 - L2 LINE L2 -613 2701 2140 294 309 88 28 chr2 173338204 173338385 -79918198 - MIR SINE MIR -65 197 6 209 294 176 0 chr2 173340919 173341021 -79915562 - MIR SINE MIR -6 256 137 2468 156 26 5 chr2 173342013 173342435 -79914148 - MSTB1 LTR MaLR 0 432 2 359 333 34 0 chr2 173342752 173342869 -79913714 + MIR3 SINE MIR 38 158 -50 21 0 0 0 chr2 173343688 173343709 -79912874 + AT_rich Low_complexity Low_complexity 1 21 0 221 305 49 49 chr2 173343993 173344075 -79912508 - L2 LINE L2 -24 3289 3208 426 151 0 0 chr2 173345129 173345202 -79911381 + CT-rich Low_complexity Low_complexity 2 74 0 234 0 0 0 chr2 173345760 173345786 -79910797 + (TC)n Simple_repeat Simple_repeat 2 27 0 186 43 0 0 chr2 173345785 173345808 -79910775 + (TG)n Simple_repeat Simple_repeat 2 24 0 * 321 274 54 54 chr2 173345921 173346089 -79910494 + MLT1J LTR MaLR 1 168 -343 1514 198 7 11 chr2 173346148 173346431 -79910152 - AluJo SINE Alu -30 282 1 531 277 64 62 chr2 173346876 173347281 -79909302 + MLT1J2 LTR MaLR 4 450 0 506 272 91 87 chr2 173348502 173348962 -79907621 + MLT1J LTR MaLR 50 511 0 257 247 123 0 chr2 173349173 173349254 -79907329 - L2 LINE L2 0 3313 3223 274 320 139 0 chr2 173349704 173349876 -79906707 + MIR3 SINE MIR 4 199 -9 21 36 0 0 chr2 173350026 173350054 -79906529 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr2 173352806 173352837 -79903746 + AT_rich Low_complexity Low_complexity 1 31 0 1043 186 0 21 chr2 173353029 173353222 -79903361 + MER5A DNA MER1_type 1 189 0 226 309 25 12 chr2 173353494 173353575 -79903008 + MIR3 SINE MIR 79 160 -48 773 221 56 28 chr2 173353575 173353788 -79902795 - MER20 DNA MER1_type 0 219 1 21 0 0 0 chr2 173354193 173354214 -79902369 + AT_rich Low_complexity Low_complexity 1 21 0 215 225 0 0 chr2 173354660 173354700 -79901883 + (CA)n Simple_repeat Simple_repeat 1 40 0 824 125 16 99 chr2 173354893 173355085 -79901498 + AluJb SINE Alu 137 312 0 271 250 23 0 chr2 173455366 173455454 -79801129 - L1MC4 LINE L1 -1339 6703 6614 266 191 0 16 chr2 173455457 173455520 -79801063 + (TATATG)n Simple_repeat Simple_repeat 3 64 0 1560 208 0 0 chr2 173455521 173455809 -79800774 - AluSx SINE Alu -23 289 2 22 0 0 0 chr2 173456358 173456380 -79800203 + AT_rich Low_complexity Low_complexity 1 22 0 1051 134 25 0 chr2 173456590 173456791 -79799792 + L1MA8 LINE L1 6086 6291 0 514 248 124 75 chr2 173457681 173457832 -79798751 - L1MEc LINE L1 -5774 622 480 1864 127 87 6 chr2 173457832 173458154 -79798429 + MER7A DNA MER2_type 1 346 0 514 248 124 75 chr2 173458154 173458494 -79798089 - L1MEc LINE L1 -5916 480 107 323 191 32 40 chr2 173459853 173459979 -79796604 + (TATAA)n Simple_repeat Simple_repeat 5 129 0 5627 151 33 23 chr2 173460018 173461240 -79795343 + L1MC1 LINE L1 5093 6333 0 21 0 0 0 chr2 173461789 173461810 -79794773 + AT_rich Low_complexity Low_complexity 1 21 0 222 62 0 0 chr2 173462373 173462405 -79794178 + (CA)n Simple_repeat Simple_repeat 2 33 0 195 42 0 0 chr2 173462542 173462566 -79794017 + (GGGA)n Simple_repeat Simple_repeat 2 25 0 26 0 0 0 chr2 173463965 173463991 -79792592 + AT_rich Low_complexity Low_complexity 1 26 0 22 56 0 0 chr2 173464088 173464124 -79792459 + AT_rich Low_complexity Low_complexity 1 36 0 273 319 69 108 chr2 173465002 173465337 -79791246 + L2 LINE L2 2360 2681 -633 194 150 25 0 chr2 173465389 173465429 -79791154 + GA-rich Low_complexity Low_complexity 2 42 0 239 323 213 40 chr2 173465498 173465925 -79790658 + L2 LINE L2 2812 3312 -1 285 51 0 0 chr2 173466595 173466634 -79789949 + (CA)n Simple_repeat Simple_repeat 1 39 0 30 45 0 0 chr2 173467052 173467096 -79789487 + AT_rich Low_complexity Low_complexity 1 44 0 2530 64 3 3 chr2 173468143 173468454 -79788129 - AluY SINE Alu 0 311 1 405 0 0 0 chr2 173468478 173468523 -79788060 + (TTA)n Simple_repeat Simple_repeat 2 46 0 697 197 15 0 chr2 173468747 173468879 -79787704 + AluJo SINE Alu 2 135 -177 2195 107 3 0 chr2 173469711 173470010 -79786573 - AluSq SINE Alu -13 300 1 408 91 26 26 chr2 173470013 173470090 -79786493 - L1PA10 LINE L1 0 6168 6092 1973 128 4 0 chr2 173470091 173470364 -79786219 - AluSx SINE Alu -38 274 1 2081 105 3 16 chr2 173470972 173471276 -79785307 + AluSx SINE Alu 1 300 -12 2276 160 89 5 chr2 173471819 173472244 -79784339 + L1MB1 LINE L1 5425 5885 -304 198 209 0 0 chr2 173472575 173472618 -79783965 + CT-rich Low_complexity Low_complexity 2 44 0 511 318 128 29 chr2 173472733 173473007 -79783576 - L2 LINE L2 -177 3136 2836 190 192 14 27 chr2 173473228 173473301 -79783282 + (TATATG)n Simple_repeat Simple_repeat 4 75 0 4680 192 41 5 chr2 173473681 173474834 -79781749 - L1MB3 LINE L1 -4 6179 4994 2115 101 38 3 chr2 173476355 173476642 -79779941 + AluSx SINE Alu 1 297 -15 737 274 42 30 chr2 173478125 173478388 -79778195 - L2 LINE L2 -15 3298 3033 388 327 37 23 chr2 173478640 173478854 -79777729 + MLT1I LTR MaLR 69 285 -124 620 216 8 22 chr2 173478978 173479112 -79777471 + FLAM_A SINE Alu 2 133 0 279 303 78 43 chr2 173479714 173479907 -79776676 - L1ME LINE L1 -278 5843 5631 2188 115 0 3 chr2 173479907 173480211 -79776372 + AluSq SINE Alu 1 303 -10 279 303 78 43 chr2 173480211 173480364 -79776219 - L1ME LINE L1 -490 5631 5485 1193 276 80 35 chr2 173480613 173481212 -79775371 - L1ME1 LINE L1 -6 6160 5535 586 158 184 2 chr2 173482518 173482654 -79773929 - L1MB4 LINE L1 0 6180 6017 283 287 83 15 chr2 173483048 173483375 -79773208 - L1MEd LINE L1 -856 1232 416 5761 172 30 19 chr2 173483473 173485235 -79771348 - L1MA8 LINE L1 -2 6289 4491 429 305 89 43 chr2 173485235 173485560 -79771023 - L1MEd LINE L1 -5098 1021 682 2832 122 115 11 chr2 173485646 173486187 -79770396 + Tigger3b DNA MER2_type 306 902 -329 231 61 0 0 chr2 173487036 173487069 -79769514 + (CA)n Simple_repeat Simple_repeat 2 34 0 674 218 53 0 chr2 173487080 173487213 -79769370 - FRAM SINE Alu -37 139 1 1838 212 81 7 chr2 173487277 173487707 -79768876 - MLT1C LTR MaLR 0 467 6 693 336 60 58 chr2 173490096 173490683 -79765900 + HERVL LTR ERVL 1873 2460 -3194 519 349 44 3 chr2 173490782 173491080 -79765503 + HERVL LTR ERVL 2604 2913 -2741 331 247 144 20 chr2 173491409 173491555 -79765028 + HERVL LTR ERVL 3338 3501 -2263 433 276 63 86 chr2 173492826 173493268 -79763315 - L1MDa LINE L1 -4574 1966 1535 1864 104 4 4 chr2 173493938 173494211 -79762372 - AluSx SINE Alu 0 305 33 2042 106 32 0 chr2 173494340 173494623 -79761960 + AluSg SINE Alu 1 292 -18 2383 93 0 0 chr2 173496344 173496654 -79759929 - AluSg SINE Alu 0 310 1 662 273 61 13 chr2 173496928 173497159 -79759424 - L1MEc LINE L1 -4677 1719 1478 1625 272 94 49 chr2 173497303 173497558 -79759025 - L1MEc LINE L1 -5127 1269 1027 2352 95 0 0 chr2 173497558 173497863 -79758720 + AluSx SINE Alu 1 305 -7 1625 272 94 49 chr2 173497863 173498215 -79758368 - L1MEc LINE L1 -5369 1027 692 2132 122 3 0 chr2 173498215 173498511 -79758072 - AluSp SINE Alu -16 297 1 1625 272 94 49 chr2 173498511 173498882 -79757701 - L1MEc LINE L1 -5704 692 246 27 0 0 0 chr2 173499455 173499482 -79757101 + AT_rich Low_complexity Low_complexity 1 27 0 199 297 102 55 chr2 173499645 173499696 -79756887 + MIR SINE MIR 108 155 -107 2039 91 7 24 chr2 173499696 173499993 -79756590 - AluSx SINE Alu -20 292 1 199 297 102 55 chr2 173499993 173500069 -79756514 + MIR SINE MIR 155 241 -21 556 311 42 40 chr2 173500267 173500691 -79755892 - L1MDa LINE L1 -4674 1866 1442 10330 194 27 9 chr2 173500709 173503919 -79752664 - L1MA4 LINE L1 -2 6298 3028 2039 113 6 52 chr2 173503932 173504096 -79752487 + THE1B LTR MaLR 1 171 -261 1790 151 53 0 chr2 173504096 173504381 -79752202 - AluSx SINE Alu -12 300 1 2039 113 6 52 chr2 173504381 173504568 -79752015 + THE1B LTR MaLR 171 406 -26 513 201 31 19 chr2 173504602 173504761 -79751822 + L1 LINE L1 2734 2894 -3252 2277 90 17 0 chr2 173504763 173505062 -79751521 + AluSg SINE Alu 1 304 -6 37620 83 9 10 chr2 173505123 173511284 -79745299 + L1PA6 LINE L1 3 6154 0 2522 261 138 22 chr2 173511305 173512707 -79743876 + L1 LINE L1 2942 4505 -1641 2946 271 45 51 chr2 173512717 173513526 -79743057 - L1MDa LINE L1 -1367 5173 4361 600 181 43 0 chr2 173513526 173513642 -79742941 - L1PA15 LINE L1 -13 6152 6032 2001 128 7 0 chr2 173513648 173513946 -79742637 + AluSg SINE Alu 9 308 -2 2946 271 45 51 chr2 173513946 173515417 -79741166 - L1MDa LINE L1 -2184 4356 1482 * 3942 277 71 25 chr2 173515412 173516751 -79739832 - L1MDa LINE L1 -4940 1600 200 1626 188 140 11 chr2 173516762 173517134 -79739449 + MSTA LTR MaLR 9 428 0 549 274 40 0 chr2 173517134 173517309 -79739274 - L1MDa LINE L1 -6340 200 19 251 331 15 54 chr2 173517363 173517493 -79739090 + L2 LINE L2 2934 3058 -214 223 270 225 9 chr2 173517632 173517743 -79738840 + L2 LINE L2 3138 3272 0 5614 221 37 26 chr2 173518160 173518550 -79738033 + L1 LINE L1 2224 2608 -3538 1789 166 6 35 chr2 173518550 173518869 -79737714 + AluSx SINE Alu 3 312 0 5614 221 37 26 chr2 173518869 173520033 -79736550 + L1 LINE L1 2608 3794 -2352 1960 148 61 17 chr2 173520034 173520393 -79736190 - THE1C LTR MaLR 0 375 1 2543 138 5 10 chr2 173520393 173520792 -79735791 - THE1C-int LTR MaLR 0 1580 1184 3864 152 10 19 chr2 173520792 173520871 -79735712 + L1 LINE L1 3791 3869 -2277 1720 151 148 13 chr2 173520871 173521248 -79735335 - MSTA LTR MaLR 0 428 1 8537 162 26 26 chr2 173521249 173522826 -79733757 - MSTA-int LTR MaLR -1 1579 3 1814 161 135 26 chr2 173522830 173523214 -79733369 - MSTA LTR MaLR -2 426 1 3864 152 10 19 chr2 173523214 173523829 -79732754 + L1 LINE L1 3872 4486 -1660 4854 100 18 32 chr2 173524715 173524973 -79731610 + L1MA2 LINE L1 5531 5791 -513 2187 50 7 4 chr2 173524973 173525250 -79731333 + AluY SINE Alu 1 278 -33 180 0 0 0 chr2 173525252 173525272 -79731311 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 4854 100 18 32 chr2 173525272 173525790 -79730793 + L1MA2 LINE L1 5792 6299 -5 253 349 36 0 chr2 173527881 173527964 -79728619 + L2 LINE L2 3175 3260 -12 522 291 95 11 chr2 173529536 173529725 -79726858 - MIR SINE MIR -38 224 20 696 185 12 17 chr2 173531814 173531987 -79724596 + CT-rich Low_complexity Low_complexity 4 175 0 1001 183 89 5 chr2 173531999 173532201 -79724382 - AluJb SINE Alu -9 303 85 333 253 53 67 chr2 173532203 173532353 -79724230 + L1MEd LINE L1 1108 1255 -4864 22 0 0 0 chr2 173532550 173532572 -79724011 + AT_rich Low_complexity Low_complexity 1 22 0 200 213 0 21 chr2 173532609 173532656 -79723927 + CT-rich Low_complexity Low_complexity 2 47 0 384 319 92 29 chr2 173533149 173533422 -79723161 - L1MC/D LINE L1 -2238 5547 5258 534 331 92 52 chr2 173533527 173534251 -79722332 - L1MC/D LINE L1 -1027 5119 4367 411 216 37 12 chr2 173534311 173534473 -79722110 + (TA)n Simple_repeat Simple_repeat 1 166 0 1505 235 36 8 chr2 173534583 173534945 -79721638 + MLT1A2 LTR MaLR 3 374 0 3641 139 25 3 chr2 173536322 173537159 -79719424 + L1P5 LINE L1 4934 5788 -363 209 204 0 11 chr2 173537164 173537252 -79719331 + (TA)n Simple_repeat Simple_repeat 2 88 0 628 179 0 0 chr2 173537264 173537370 -79719213 + MLT2B3 LTR ERVL 15 120 -434 233 160 20 0 chr2 173537370 173537420 -79719163 + (TA)n Simple_repeat Simple_repeat 1 51 0 2286 89 62 0 chr2 173537436 173537774 -79718809 + L1PB1 LINE L1 5793 6151 0 221 239 0 0 chr2 173537796 173537842 -79718741 - MIR SINE MIR -105 157 112 1889 214 82 65 chr2 173537853 173538390 -79718193 + MLT2B3 LTR ERVL 1 546 -8 1316 211 48 0 chr2 173540354 173540624 -79715959 - AluJb SINE Alu -29 283 1 1886 221 89 4 chr2 173541047 173541509 -79715074 - MLT1D LTR MaLR -2 503 3 805 323 12 4 chr2 173542281 173542529 -79714054 + MIR SINE MIR 13 262 0 316 275 43 43 chr2 173542840 173542978 -79713605 - L2 LINE L2 0 3313 3176 284 386 17 6 chr2 173543115 173543291 -79713292 - L2 LINE L2 -383 2931 2754 333 264 58 0 chr2 173543369 173543456 -79713127 - MLT1D LTR MaLR -122 383 292 381 345 35 49 chr2 173543456 173543659 -79712924 - L2 LINE L2 -685 2629 2430 42 48 0 0 chr2 173545138 173545201 -79711382 + AT_rich Low_complexity Low_complexity 1 63 0 1334 300 45 32 chr2 173545215 173546762 -79709821 - L1ME2 LINE L1 -48 6116 4533 6908 227 31 17 chr2 173546782 173548640 -79707943 + L1 LINE L1 3040 4923 -1223 35 83 0 0 chr2 173548696 173548780 -79707803 + AT_rich Low_complexity Low_complexity 1 84 0 320 326 58 16 chr2 173548812 173549125 -79707458 - L1ME2 LINE L1 -1743 4403 4078 23 0 0 0 chr2 173549429 173549452 -79707131 + AT_rich Low_complexity Low_complexity 1 23 0 2817 169 22 7 chr2 173549452 173549992 -79706591 - L1PA16 LINE L1 -8 6158 5611 2677 217 41 4 chr2 173549992 173550696 -79705887 - L1 LINE L1 -2395 3751 3022 1853 266 148 22 chr2 173551771 173553194 -79703389 + L1MC4a LINE L1 2237 3838 -2308 1798 146 7 4 chr2 173553281 173553585 -79702998 - AluSg SINE Alu 0 305 1 721 230 7 7 chr2 173553606 173553758 -79702825 - FRAM SINE Alu -12 164 13 1187 152 0 0 chr2 173554734 173554912 -79701671 - AluSg/x SINE Alu -12 300 123 186 303 0 45 chr2 173556006 173556072 -79700511 + MER5A DNA MER1_type 122 184 -5 23 54 0 0 chr2 173556786 173556823 -79699760 + AT_rich Low_complexity Low_complexity 1 37 0 315 0 0 0 chr2 173557637 173557672 -79698911 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 236 263 18 0 chr2 173558187 173558244 -79698339 + GA-rich Low_complexity Low_complexity 1 58 0 408 303 27 23 chr2 173559837 173560098 -79696485 - MIR SINE MIR 0 262 1 236 304 208 36 chr2 173560295 173560463 -79696120 - MIR SINE MIR -36 226 30 2469 71 10 0 chr2 173560810 173561119 -79695464 - AluSp SINE Alu 0 313 2 32 26 0 0 chr2 173561189 173561228 -79695355 + AT_rich Low_complexity Low_complexity 1 39 0 22 35 0 0 chr2 173561467 173561496 -79695087 + AT_rich Low_complexity Low_complexity 1 29 0 232 268 115 58 chr2 173561952 173562195 -79694388 + L1MC4a LINE L1 4795 5051 -1095 448 239 0 0 chr2 173562229 173562321 -79694262 - U13 snRNA snRNA -4 100 9 424 294 60 67 chr2 173562517 173562689 -79693894 + L1MC4a LINE L1 5273 5445 -2363 1933 137 0 0 chr2 173562689 173563024 -79693559 + AluSq SINE Alu 1 335 0 424 294 60 67 chr2 173563024 173563166 -79693417 + L1MC4a LINE L1 5445 5586 -2222 468 238 27 56 chr2 173563392 173563630 -79692953 - MER41B LTR ERV1 -210 425 55 282 266 0 64 chr2 173563727 173563821 -79692762 + L1MC4a LINE L1 5569 5656 -2152 1741 96 0 0 chr2 173563851 173564100 -79692483 + L1PA13 LINE L1 5911 6159 -4 364 307 66 23 chr2 173564147 173564480 -79692103 + L1MC4a LINE L1 5716 6067 -1741 198 0 0 0 chr2 173564702 173564724 -79691859 + (TGAA)n Simple_repeat Simple_repeat 1 22 0 2068 96 46 0 chr2 173564988 173565269 -79691314 + AluSc SINE Alu 1 294 -15 183 42 0 0 chr2 173565527 173565551 -79691032 + (CA)n Simple_repeat Simple_repeat 1 24 0 1056 197 65 55 chr2 173565821 173566111 -79690472 + AluJo SINE Alu 1 293 -9 21 36 0 0 chr2 173566996 173567024 -79689559 + AT_rich Low_complexity Low_complexity 1 28 0 303 333 57 8 chr2 173567116 173567239 -79689344 - L2 LINE L2 -5 3308 3180 929 122 8 0 chr2 173567853 173567984 -79688599 - AluSq/x SINE Alu -179 134 3 27 49 0 0 chr2 173570074 173570115 -79686468 + AT_rich Low_complexity Low_complexity 1 41 0 205 295 53 21 chr2 173570856 173570951 -79685632 - MIR3 SINE MIR 0 208 111 2454 84 3 0 chr2 173571056 173571366 -79685217 - AluSp SINE Alu 0 313 3 257 329 38 0 chr2 173571779 173571858 -79684725 - L2 LINE L2 -12 3260 3179 279 0 0 0 chr2 173571901 173571932 -79684651 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2123 89 7 11 chr2 173571933 173572215 -79684368 - AluSp SINE Alu -32 281 1 303 291 119 46 chr2 173572414 173572565 -79684018 - L2 LINE L2 -557 2757 2596 293 176 0 0 chr2 173573083 173573134 -79683449 + MER53 DNA DNA 139 189 0 213 342 154 0 chr2 173573311 173573460 -79683123 + MIR SINE MIR 43 214 -48 23 0 0 0 chr2 173577238 173577261 -79679322 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr2 173577903 173577933 -79678650 + AT_rich Low_complexity Low_complexity 1 30 0 1218 218 0 11 chr2 173579738 173579999 -79676584 + AluJb SINE Alu 1 258 -54 296 169 22 34 chr2 173580179 173580268 -79676315 + GA-rich Low_complexity Low_complexity 1 88 0 22 0 0 0 chr2 173580561 173580583 -79676000 + AT_rich Low_complexity Low_complexity 1 22 0 218 293 86 0 chr2 173580804 173580862 -79675721 - MIR SINE MIR -151 111 49 354 297 11 40 chr2 173581832 173581953 -79674630 + MIR SINE MIR 30 146 -64 602 193 15 15 chr2 173581961 173582096 -79674487 + L1MC4 LINE L1 7513 7647 -395 519 269 104 0 chr2 173582097 173582279 -79674304 + L1MD3 LINE L1 7787 7987 -8 551 259 117 15 chr2 173582850 173583055 -79673528 - MIR SINE MIR 0 262 37 499 310 51 48 chr2 173583295 173583666 -79672917 + L2 LINE L2 2208 2579 -735 243 247 96 0 chr2 173584243 173584316 -79672267 - MER20 DNA MER1_type -57 162 83 1107 172 6 0 chr2 173584642 173584822 -79671761 + MER2 DNA MER2_type 1 181 -164 30 69 0 0 chr2 173586680 173586738 -79669845 + AT_rich Low_complexity Low_complexity 1 58 0 2127 160 40 104 chr2 173586855 173587404 -79669179 - MLT2B2 LTR ERVL -1 514 1 8168 173 43 26 chr2 173587404 173588994 -79667589 - ERVL-B2 LTR ERVL -7 5757 4141 695 143 118 0 chr2 173588996 173589115 -79667468 - MLT2B2 LTR ERVL -382 133 1 2219 124 0 0 chr2 173589310 173589601 -79666982 - AluSx SINE Alu -21 291 1 394 269 99 9 chr2 173590814 173590979 -79665604 - MLT1L LTR MaLR -319 269 81 29 28 0 0 chr2 173592472 173592508 -79664075 + AT_rich Low_complexity Low_complexity 1 36 0 1201 264 112 55 chr2 173592821 173593366 -79663217 + LTR41 LTR ERVL 1 576 -197 3016 159 37 14 chr2 173594026 173594593 -79661990 + LTR22 LTR ERVK 1 580 0 3421 153 55 64 chr2 173594724 173595475 -79661108 + HERVK22 LTR ERVK 9 752 -6085 852 176 31 6 chr2 173595877 173596036 -79660547 + HERVK22 LTR ERVK 2327 2489 -4348 4494 106 129 12 chr2 173596079 173596799 -79659784 - pTR5 LTR ERV1 0 2438 1635 528 138 0 0 chr2 173597198 173597278 -79659305 + HERVK22 LTR ERVK 3474 3553 -3284 * 6446 118 8 12 chr2 173597274 173598359 -79658224 + HERVK22 LTR ERVK 2021 4824 -2013 4352 164 36 24 chr2 173598422 173599366 -79657217 + HERVKC4 LTR ERVK 2626 6834 -3 3208 145 26 28 chr2 173599367 173599948 -79656635 + LTR22 LTR ERVK 1 580 0 2393 109 17 0 chr2 173600213 173600561 -79656022 - L1PA10 LINE L1 -16 6152 5799 1632 224 128 29 chr2 173600774 173601284 -79655299 + L1MC3 LINE L1 6403 6962 -823 745 272 72 9 chr2 173601281 173601627 -79654956 - L1MCa LINE L1 -3462 2964 2597 * 827 192 51 31 chr2 173601615 173602055 -79654528 - L1MCa LINE L1 -4090 2336 1847 2756 214 48 35 chr2 173602056 173602888 -79653695 - L1MCa LINE L1 -4786 1640 798 4823 137 37 4 chr2 173602921 173603653 -79652930 + THE1-int LTR MaLR 506 1261 -319 335 211 79 40 chr2 173603653 173603729 -79652854 - AluS SINE Alu -223 80 2 898 221 100 108 chr2 173603733 173604213 -79652370 - L1MCa LINE L1 -5948 478 3 23 0 0 0 chr2 173604622 173604645 -79651938 + AT_rich Low_complexity Low_complexity 1 23 0 2872 117 28 37 chr2 173605324 173605861 -79650722 - L1MA3 LINE L1 -5 7719 7188 215 0 67 0 chr2 173605861 173605891 -79650692 + (TTTTC)n Simple_repeat Simple_repeat 5 36 0 1394 163 61 0 chr2 173605912 173606157 -79650426 - AluSq SINE Alu -53 260 1 8110 149 33 23 chr2 173606157 173607573 -79649010 - L1MA3 LINE L1 -526 7198 5798 2349 69 0 3 chr2 173607573 173607863 -79648720 + AluY SINE Alu 1 289 -22 188 0 74 0 chr2 173607873 173607900 -79648683 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 8110 149 33 23 chr2 173607900 173608446 -79648137 - L1MA3 LINE L1 -1934 5790 5206 10977 205 6 12 chr2 173608454 173611694 -79644889 - L1PA13 LINE L1 0 7601 4376 1349 157 0 0 chr2 173611694 173611920 -79644663 - L1P LINE L1 -3568 2578 2350 6389 254 48 37 chr2 173611927 173614238 -79642345 - L1PA13 LINE L1 -4286 3298 952 20717 158 49 7 chr2 173614266 173618212 -79638371 - L1MA3 LINE L1 -3444 4121 13 907 230 16 26 chr2 173618306 173618497 -79638086 - MER5A DNA MER1_type 0 189 1 2002 113 81 14 chr2 173621222 173621599 -79634984 + LTR7 LTR ERV1 3 450 0 390 314 92 7 chr2 173622125 173622278 -79634305 - L2 LINE L2 0 3313 3148 262 333 137 0 chr2 173622299 173622416 -79634167 + L2 LINE L2 3181 3313 0 * 423 334 161 26 chr2 173622411 173622908 -79633675 - L2 LINE L2 -1025 2289 1726 345 232 21 21 chr2 173623215 173623310 -79633273 - MLT1I LTR MaLR 0 409 315 258 314 10 20 chr2 173623627 173623729 -79632854 - MER5B DNA MER1_type -10 168 68 4256 206 34 20 chr2 173624286 173624965 -79631618 - MER54A LTR ERVL 0 901 206 2287 50 60 0 chr2 173624965 173625246 -79631337 + AluY SINE Alu 1 298 -13 4256 206 34 20 chr2 173625246 173625451 -79631132 - MER54A LTR ERVL -695 206 5 199 305 12 37 chr2 173626141 173626223 -79630360 + MIR SINE MIR 61 140 -122 29 0 0 0 chr2 173626281 173626310 -79630273 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr2 173626327 173626356 -79630227 + AT_rich Low_complexity Low_complexity 1 29 0 2061 113 3 0 chr2 173627359 173627672 -79628911 - AluSc SINE Alu 0 314 1 241 287 83 65 chr2 173628526 173628634 -79627949 - MIR3 SINE MIR -15 193 84 693 210 83 17 chr2 173628646 173628827 -79627756 - MER3 DNA MER1_type 0 209 17 460 181 11 0 chr2 173629154 173629248 -79627335 - L1PA15 LINE L1 -4 6161 6067 204 376 43 54 chr2 173630992 173631178 -79625405 - L2 LINE L2 -56 3216 3033 22 0 0 0 chr2 173631939 173631961 -79624622 + AT_rich Low_complexity Low_complexity 1 22 0 361 314 142 15 chr2 173631969 173632306 -79624277 - HAL1 LINE L1 0 2507 2128 714 293 43 53 chr2 173632472 173632888 -79623695 - HAL1 LINE L1 -623 1884 1473 300 233 27 0 chr2 173632897 173632970 -79623613 - L1MD3 LINE L1 -173 7822 7748 28648 125 18 57 chr2 173632978 173639400 -79617183 + L1PA8 LINE L1 12 6172 0 1747 236 49 7 chr2 173639431 173639881 -79616702 - L1MC4a LINE L1 -221 7587 7119 22 0 0 0 chr2 173639891 173639913 -79616670 + AT_rich Low_complexity Low_complexity 1 22 0 7781 18 0 0 chr2 173639923 173640854 -79615729 - L1PA2 LINE L1 0 6155 5226 13729 26 0 0 chr2 173640854 173642479 -79614104 + L1PA2 LINE L1 3613 5237 -909 2647 197 13 31 chr2 173642477 173643081 -79613502 - L1MC3 LINE L1 -10 7775 7183 * 790 306 73 68 chr2 173643053 173643185 -79613398 - HAL1 LINE L1 -1337 1170 1040 * 1770 195 12 32 chr2 173643185 173643616 -79612967 - L1MA9 LINE L1 -3 6309 5888 790 306 73 68 chr2 173643616 173644300 -79612283 - HAL1 LINE L1 -1467 1040 350 625 305 155 27 chr2 173644913 173645359 -79611224 + MLT1J LTR MaLR 3 505 -6 861 151 178 36 chr2 173646281 173646500 -79610083 + L1PB4 LINE L1 5907 6156 0 2201 95 3 0 chr2 173646594 173646901 -79609682 + AluSx SINE Alu 1 308 0 3692 176 42 9 chr2 173647284 173648070 -79608513 - L1MA7 LINE L1 -10 6281 5470 375 42 0 0 chr2 173648072 173648120 -79608463 + L1MA7 LINE L1 5433 5480 -811 334 299 87 22 chr2 173648440 173648624 -79607959 - L2 LINE L2 -9 3304 3109 307 236 63 31 chr2 173649851 173649978 -79606605 + L1MC5 LINE L1 7630 7760 -201 226 408 0 6 chr2 173650356 173650530 -79606053 + C-rich Low_complexity Low_complexity 4 176 0 203 222 32 0 chr2 173650642 173650705 -79605878 + GA-rich Low_complexity Low_complexity 1 65 0 198 348 36 14 chr2 173653675 173653813 -79602770 + MER5A DNA MER1_type 24 164 -25 1155 131 26 11 chr2 173654358 173654549 -79602034 - L1MA7 LINE L1 -451 5840 5647 2274 136 8 75 chr2 173654553 173655045 -79601538 + L1MA7 LINE L1 5833 6291 0 396 350 67 35 chr2 173655763 173656043 -79600540 - L1MC4a LINE L1 -1928 5880 5584 2239 126 0 0 chr2 173656043 173656352 -79600231 + AluSx SINE Alu 1 309 -3 396 350 67 35 chr2 173656352 173656442 -79600141 - L1MC4a LINE L1 -2224 5584 5498 430 303 0 8 chr2 173657727 173657846 -79598737 + MER94 DNA DNA 3 120 -14 726 195 59 42 chr2 173659784 173660020 -79596563 - L1ME2 LINE L1 -210 5954 5715 414 298 14 28 chr2 173660101 173660316 -79596267 - L1MDa LINE L1 -4597 1943 1732 369 271 7 14 chr2 173660530 173660674 -79595909 + (TA)n Simple_repeat Simple_repeat 1 143 0 232 311 122 25 chr2 173661009 173661295 -79595288 - L1ME LINE L1 -316 5805 5492 46 68 0 0 chr2 173661318 173661406 -79595177 + AT_rich Low_complexity Low_complexity 1 88 0 883 335 139 7 chr2 173663010 173663587 -79592996 - L3 LINE CR1 -153 1424 772 322 369 84 9 chr2 173663609 173663834 -79592749 - MIR SINE MIR -2 260 19 23 0 0 0 chr2 173664426 173664449 -79592134 + AT_rich Low_complexity Low_complexity 1 23 0 2355 74 3 3 chr2 173664495 173664804 -79591779 - AluY SINE Alu -2 309 1 28 29 0 0 chr2 173666638 173666673 -79589910 + AT_rich Low_complexity Low_complexity 1 35 0 597 43 0 87 chr2 173666673 173666765 -79589818 - L1PA5 LINE L1 -7 6147 6064 21 36 0 0 chr2 173669470 173669498 -79587085 + AT_rich Low_complexity Low_complexity 1 28 0 23 54 0 0 chr2 173669644 173669681 -79586902 + AT_rich Low_complexity Low_complexity 1 37 0 432 118 0 0 chr2 173669841 173669909 -79586674 + (TA)n Simple_repeat Simple_repeat 1 68 0 181 210 32 0 chr2 173669937 173669999 -79586584 + (CATATA)n Simple_repeat Simple_repeat 3 66 0 290 216 48 16 chr2 173671174 173671299 -79585284 + (TTATA)n Simple_repeat Simple_repeat 4 132 0 21 0 0 0 chr2 173671624 173671645 -79584938 + AT_rich Low_complexity Low_complexity 1 21 0 2127 102 15 24 chr2 173671782 173672116 -79584467 - L1PA13 LINE L1 0 6163 5833 771 132 0 0 chr2 173672116 173672237 -79584346 + L1P LINE L1 4645 4765 -1381 1257 49 6 0 chr2 173672855 173673017 -79583566 + L1PA4 LINE L1 5993 6155 0 207 310 0 0 chr2 173673487 173673545 -79583038 + (TTA)n Simple_repeat Simple_repeat 2 59 0 1123 215 12 8 chr2 173673558 173673800 -79582783 - MIR SINE MIR -5 257 15 226 184 26 0 chr2 173673821 173673897 -79582686 + (CAT)n Simple_repeat Simple_repeat 3 80 0 24 53 0 0 chr2 173674603 173674641 -79581942 + AT_rich Low_complexity Low_complexity 1 38 0 299 191 44 0 chr2 173675102 173675170 -79581413 + L1MB7 LINE L1 6104 6174 -10 532 317 102 62 chr2 173675789 173676438 -79580145 + HAL1b LINE L1 109 783 -565 282 309 118 25 chr2 173676495 173676732 -79579851 + Charlie8 DNA MER1_type 58 1407 -1010 240 186 0 0 chr2 173677478 173677537 -79579046 + (TA)n Simple_repeat Simple_repeat 2 60 0 254 270 72 45 chr2 173678094 173678205 -79578378 - MIR SINE MIR -74 188 75 192 179 0 0 chr2 173678288 173678327 -79578256 + GA-rich Low_complexity Low_complexity 3 41 0 324 272 39 75 chr2 173679612 173679652 -79576931 - MIR SINE MIR -62 200 160 1804 195 25 8 chr2 173679652 173680011 -79576572 - MLT1A1 LTR MaLR 0 365 1 324 272 39 75 chr2 173680011 173680160 -79576423 - MIR SINE MIR -102 160 24 190 346 86 12 chr2 173680923 173681004 -79575579 - MIR SINE MIR -15 247 161 231 0 77 0 chr2 173681005 173681044 -79575539 + GA-rich Low_complexity Low_complexity 2 43 0 180 143 0 0 chr2 173681043 173681066 -79575517 + (TG)n Simple_repeat Simple_repeat 1 26 -9 * 2209 84 10 0 chr2 173681066 173681364 -79575219 - AluY SINE Alu -10 301 1 180 143 0 0 chr2 173681364 173681375 -79575208 + (TG)n Simple_repeat Simple_repeat 25 35 0 204 342 108 9 chr2 173681377 173681488 -79575095 - MIR SINE MIR -122 140 19 249 33 0 0 chr2 173682098 173682128 -79574455 + (A)n Simple_repeat Simple_repeat 1 30 0 3292 65 5 7 chr2 173683045 173683479 -79573104 - L1PA7 LINE L1 -14 6140 5708 217 233 192 0 chr2 173683634 173683707 -79572876 - L2 LINE L2 -1 3312 3226 196 318 127 9 chr2 173683742 173683852 -79572731 - MIR SINE MIR -4 258 136 1106 167 48 53 chr2 173684072 173684273 -79572310 + MER2 DNA MER2_type 2 201 -144 1793 166 27 23 chr2 173684273 173684652 -79571931 - Tigger3(Golem) DNA MER2_type 0 3029 1 577 220 113 0 chr2 173684653 173684794 -79571789 + MER2 DNA MER2_type 188 344 -1 1183 143 10 15 chr2 173684826 173685022 -79571561 - AluJb SINE Alu -13 299 105 24 77 0 0 chr2 173685350 173685402 -79571181 + AT_rich Low_complexity Low_complexity 1 52 0 333 102 0 0 chr2 173686307 173686366 -79570217 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 229 154 51 0 chr2 173686372 173686411 -79570172 - MLT1H LTR MaLR -49 500 460 272 193 70 0 chr2 173686594 173686651 -79569932 - MLT1H LTR MaLR -488 61 1 28 0 0 0 chr2 173686725 173686753 -79569830 + AT_rich Low_complexity Low_complexity 1 28 0 2623 81 7 65 chr2 173686796 173687214 -79569369 - L1PA7 LINE L1 -2 6152 5759 1702 108 0 0 chr2 173687217 173687467 -79569116 + L1P LINE L1 3745 3994 -2152 2160 124 21 3 chr2 173687467 173687805 -79568778 - L1PA16 LINE L1 -9 6157 5814 22 56 0 0 chr2 173689276 173689312 -79567271 + AT_rich Low_complexity Low_complexity 1 36 0 682 287 42 17 chr2 173689447 173689684 -79566899 + MIR SINE MIR 10 252 -10 354 306 52 0 chr2 173689875 173690009 -79566574 - MIR SINE MIR -9 253 113 21 0 0 0 chr2 173690556 173690577 -79566006 + AT_rich Low_complexity Low_complexity 1 21 0 217 356 11 22 chr2 173690631 173690721 -79565862 - L2 LINE L2 -48 3224 3136 394 283 102 31 chr2 173690830 173691184 -79565399 + L1MC5 LINE L1 7310 7688 -273 246 230 108 65 chr2 173691206 173691345 -79565238 + L1MC5 LINE L1 7743 7887 -74 193 242 172 70 chr2 173691431 173691559 -79565024 - L2 LINE L2 -217 3055 2915 2183 76 22 0 chr2 173692371 173692647 -79563936 - AluSc SINE Alu -24 285 4 4586 139 29 42 chr2 173692688 173693545 -79563038 - L1PA16 LINE L1 0 6166 5321 23 0 0 0 chr2 173694501 173694524 -79562059 + AT_rich Low_complexity Low_complexity 1 23 0 4389 146 14 4 chr2 173694592 173695353 -79561230 + L1MA4 LINE L1 5532 6300 0 2662 101 2 15 chr2 173696120 173696515 -79560068 - L1PA8 LINE L1 -6 6166 5777 3631 82 21 1 chr2 173696684 173697505 -79559078 - L1PA8 LINE L1 -471 5701 4870 519 73 0 0 chr2 173697504 173697572 -79559011 + L1P LINE L1 3757 3824 -2322 * 345 183 19 145 chr2 173697572 173697734 -79558849 - LTR9 LTR ERV1 -31 581 366 419 92 15 0 chr2 173697864 173697929 -79558654 + (TTCC)n Simple_repeat Simple_repeat 1 66 0 2028 144 7 0 chr2 173697929 173698228 -79558355 - AluSx SINE Alu -11 301 1 21 0 0 0 chr2 173699350 173699371 -79557212 + AT_rich Low_complexity Low_complexity 1 21 0 344 293 49 16 chr2 173699800 173699923 -79556660 + MIR SINE MIR 116 242 -20 397 382 64 4 chr2 173700389 173700622 -79555961 + L3 LINE CR1 612 858 -719 1231 174 22 4 chr2 173700640 173700870 -79555713 + AluJo SINE Alu 66 299 -13 230 372 173 16 chr2 173700896 173701087 -79555496 + L3 LINE CR1 891 1111 -466 770 202 25 18 chr2 173701898 173702111 -79554472 + MER33 DNA MER1_type 1 188 -97 1324 239 15 0 chr2 173702111 173702371 -79554212 + Tigger7 DNA MER2_type 2 265 -2222 439 211 0 0 chr2 173702374 173702464 -79554119 + Tigger7 DNA MER2_type 2498 2587 0 26 64 0 0 chr2 173702518 173702565 -79554018 + AT_rich Low_complexity Low_complexity 1 47 0 550 186 48 0 chr2 173702608 173702732 -79553851 + MER33 DNA MER1_type 233 362 -1 389 289 170 7 chr2 173702755 173702890 -79553693 + MER5A DNA MER1_type 32 188 -1 705 235 31 19 chr2 173702917 173703079 -79553504 - MER5B DNA MER1_type -14 164 1 345 301 111 13 chr2 173703363 173703516 -79553067 + L2 LINE L2 3124 3291 -22 704 332 61 48 chr2 173703540 173704101 -79552482 - MLT1K LTR MaLR -10 578 11 240 250 0 0 chr2 173704148 173704212 -79552371 - L1MC4 LINE L1 -1339 6703 6640 196 75 25 25 chr2 173704214 173704254 -79552329 + (TA)n Simple_repeat Simple_repeat 2 41 0 189 345 17 17 chr2 173704729 173704787 -79551796 + MIR SINE MIR 17 74 -134 2517 123 11 5 chr2 173704787 173705160 -79551423 - THE1C LTR MaLR 0 375 1 6786 213 84 8 chr2 173705160 173706629 -79549954 - THE1C-int LTR MaLR 0 1580 1 2380 142 8 3 chr2 173706629 173707002 -79549581 - THE1C LTR MaLR 0 375 1 293 339 43 0 chr2 173707004 173707119 -79549464 + MIR SINE MIR 71 190 -72 210 208 0 0 chr2 173708081 173708134 -79548449 + (TATG)n Simple_repeat Simple_repeat 4 56 0 210 354 125 0 chr2 173708259 173708355 -79548228 - L2 LINE L2 -12 3301 3194 289 329 51 44 chr2 173709590 173709748 -79546835 + MIR SINE MIR 81 239 -23 782 149 20 0 chr2 173709823 173709971 -79546612 - L1MA8 LINE L1 -3 6288 6138 890 48 112 0 chr2 173709971 173710096 -79546487 + MER85 DNA T2_type 1 139 0 1095 142 5 59 chr2 173710113 173710332 -79546251 + L1MA8 LINE L1 5947 6153 -138 450 291 128 34 chr2 173710961 173711140 -79545443 + MIR SINE MIR 59 254 -8 206 300 0 33 chr2 173711282 173711342 -79545241 + L3 LINE CR1 1515 1572 -5 212 171 0 0 chr2 173712209 173712250 -79544333 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 243 273 66 50 chr2 173712306 173712548 -79544035 - L1ME4a LINE L1 -64 6057 5812 23 54 0 0 chr2 173712651 173712688 -79543895 + AT_rich Low_complexity Low_complexity 1 37 0 31 26 0 0 chr2 173715459 173715497 -79541086 + AT_rich Low_complexity Low_complexity 1 38 0 559 279 86 44 chr2 173715693 173716055 -79540528 + L1MC4a LINE L1 5594 5970 -1838 630 270 77 12 chr2 173716200 173716459 -79540124 - L1ME3A LINE L1 -22 6148 5873 502 307 26 26 chr2 173716818 173716971 -79539612 - HERV16 LTR ERVL -1910 3086 2934 426 273 10 0 chr2 173716966 173717065 -79539518 - HERV16 LTR ERVL -2190 2806 2707 * 735 196 37 0 chr2 173717157 173717320 -79539263 + MLT1D LTR MaLR 5 173 -332 585 204 113 16 chr2 173717789 173717975 -79538608 + MLT1D LTR MaLR 300 503 -2 424 290 30 53 chr2 173718017 173718186 -79538397 - HERV16 LTR ERVL -4103 893 729 495 232 80 66 chr2 173718246 173718535 -79538048 - LTR16A1 LTR ERVL -164 293 1 250 320 95 0 chr2 173718678 173718825 -79537758 - L1M4 LINE L1 -3594 2552 2392 256 350 14 35 chr2 173719635 173719778 -79536805 + MER117 DNA MER1_type 15 154 -43 1008 326 89 16 chr2 173720439 173721186 -79535397 + L2 LINE L2 2511 3313 0 21 0 0 0 chr2 173722078 173722099 -79534484 + AT_rich Low_complexity Low_complexity 1 21 0 36 62 0 0 chr2 173723235 173723299 -79533284 + AT_rich Low_complexity Low_complexity 1 64 0 1712 150 10 33 chr2 173723736 173724036 -79532547 + AluJb SINE Alu 6 298 -14 1630 125 50 39 chr2 173724966 173725288 -79531295 + AluSq SINE Alu 1 325 0 202 325 38 0 chr2 173725588 173725668 -79530915 + L2 LINE L2 1993 2075 -1239 33 0 0 0 chr2 173726256 173726289 -79530294 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr2 173726358 173726379 -79530204 + AT_rich Low_complexity Low_complexity 1 21 0 2089 104 0 10 chr2 173726483 173726780 -79529803 - AluY SINE Alu -17 294 1 4769 59 16 1 chr2 173727409 173728421 -79528162 - MER11A LTR ERVK 0 1266 1 2101 140 0 0 chr2 173728449 173728757 -79527826 + AluSc SINE Alu 1 308 -1 1583 98 45 0 chr2 173729013 173729257 -79527326 - MLT2A2 LTR ERVL -198 255 1 1853 224 85 10 chr2 173731092 173731588 -79524995 - Tigger7 DNA MER2_type -200 533 1 390 320 27 99 chr2 173733566 173733860 -79522723 - L2 LINE L2 -52 3220 2948 186 286 61 0 chr2 173733887 173733936 -79522647 + L2 LINE L2 3190 3241 -72 182 315 192 0 chr2 173733918 173733991 -79522592 - L2 LINE L2 -16 3297 3211 * 418 376 122 43 chr2 173734095 173734686 -79521897 - L2 LINE L2 -2293 1021 353 1856 107 0 35 chr2 173734686 173734975 -79521608 + L1PA8A LINE L1 5850 6128 -3 418 376 122 43 chr2 173734975 173735155 -79521428 - L2 LINE L2 -2961 353 189 186 103 0 0 chr2 173737871 173737900 -79518683 + (T)n Simple_repeat Simple_repeat 1 29 0 21 36 0 0 chr2 173738554 173738582 -79518001 + AT_rich Low_complexity Low_complexity 1 28 0 229 353 49 48 chr2 173739613 173739759 -79516824 - MIR SINE MIR -61 147 6 180 263 0 0 chr2 173740776 173740814 -79515769 - L2 LINE L2 -12 3301 3264 818 149 0 0 chr2 173741246 173741367 -79515216 + FLAM_C SINE Alu 1 121 -12 443 170 57 0 chr2 173741457 173741563 -79515020 - L1MB7 LINE L1 0 6184 6073 2973 201 67 42 chr2 173742168 173742312 -79514271 - L1ME2 LINE L1 -118 6440 6301 2885 84 0 0 chr2 173742312 173742705 -79513878 - L1PA13 LINE L1 -1 6162 5770 2973 201 67 42 chr2 173742705 173744073 -79512510 - L1ME2 LINE L1 -257 6301 4890 2510 246 67 59 chr2 173744071 173744878 -79511705 - L1ME2 LINE L1 -2906 3634 2835 * 2051 29 4 0 chr2 173744878 173745124 -79511459 - L1PA3 LINE L1 0 6155 5909 2510 246 67 59 chr2 173745124 173745640 -79510943 - L1ME2 LINE L1 -3705 2835 2318 186 103 0 0 chr2 173745640 173745669 -79510914 + (TCTA)n Simple_repeat Simple_repeat 2 30 0 2510 246 67 59 chr2 173745669 173745699 -79510884 - L1ME2 LINE L1 -4222 2318 2290 616 217 120 11 chr2 173745741 173745925 -79510658 - L1ME2 LINE L1 -4366 2174 1971 866 183 170 35 chr2 173745925 173746155 -79510428 + L1PB4 LINE L1 5892 6152 -4 534 198 149 0 chr2 173746535 173746656 -79509927 + MER5A DNA MER1_type 48 186 -3 807 251 16 0 chr2 173746673 173746864 -79509719 - MER3 DNA MER1_type -15 194 1 618 283 0 0 chr2 173746918 173747070 -79509513 + LTR33 LTR ERVL 1 152 -369 412 84 14 14 chr2 173747490 173747561 -79509022 + (GGAA)n Simple_repeat Simple_repeat 2 72 0 2288 108 0 0 chr2 173747754 173748061 -79508522 + AluSg SINE Alu 1 307 -3 254 319 28 7 chr2 173750039 173750183 -79506400 + L1MEc LINE L1 38 184 -6212 719 289 103 33 chr2 173750213 173750725 -79505858 + L1MEc LINE L1 631 1178 -5218 1278 268 50 35 chr2 173750774 173751378 -79505205 + L1MEc LINE L1 1620 2232 -4164 1598 266 47 12 chr2 173751480 173752122 -79504461 + L1MEc LINE L1 2306 2969 -3246 1477 261 61 27 chr2 173752117 173752703 -79503880 + L1M4 LINE L1 4183 4788 -1358 * 455 269 87 20 chr2 173752703 173752852 -79503731 - MIR SINE MIR -30 232 74 2138 114 70 9 chr2 173753538 173753881 -79502702 + THE1B LTR MaLR 1 364 0 732 300 115 32 chr2 173754452 173754799 -79501784 - LTR16A LTR ERVL -54 396 21 24 32 0 0 chr2 173755096 173755127 -79501456 + AT_rich Low_complexity Low_complexity 1 31 0 289 320 13 95 chr2 173755186 173755564 -79501019 + L2 LINE L2 2283 2629 -685 219 336 44 9 chr2 173755824 173755937 -79500646 + L2 LINE L2 2936 3052 -220 2787 7 0 0 chr2 173756557 173756864 -79499719 - AluY SINE Alu -4 307 1 22 70 0 0 chr2 173757510 173757553 -79499030 + AT_rich Low_complexity Low_complexity 1 43 0 1830 143 11 0 chr2 173757990 173758276 -79498307 + AluSx SINE Alu 1 289 -23 249 83 0 0 chr2 173758277 173758313 -79498270 + (CA)n Simple_repeat Simple_repeat 2 37 0 285 331 33 0 chr2 173758481 173758602 -79497981 - MIR3 SINE MIR -28 180 56 487 277 126 19 chr2 173758841 173759000 -79497583 + MIR SINE MIR 1 176 -86 767 178 8 0 chr2 173759000 173759129 -79497454 + AluJ SINE Alu 1 130 -172 1784 152 68 17 chr2 173759145 173759500 -79497083 - THE1C LTR MaLR -2 373 1 902 184 7 0 chr2 173759500 173759670 -79496913 + AluJ SINE Alu 138 308 0 215 309 12 12 chr2 173759674 173759755 -79496828 + MIR SINE MIR 172 252 -10 27 0 0 0 chr2 173760022 173760049 -79496534 + AT_rich Low_complexity Low_complexity 1 27 0 3460 107 8 2 chr2 173760220 173760695 -79495888 - MER1A DNA MER1_type 0 529 52 261 347 28 7 chr2 173761092 173761236 -79495347 - MARNA DNA Mariner -45 541 395 1760 191 0 9 chr2 173761260 173761575 -79495008 - AluJb SINE Alu 0 312 1 670 254 5 5 chr2 173762113 173762298 -79494285 - L1MEc LINE L1 -3033 3349 3165 186 118 88 0 chr2 173762306 173762408 -79494175 + (TA)n Simple_repeat Simple_repeat 2 112 0 1144 270 24 26 chr2 173762408 173762823 -79493760 - L1 LINE L1 -3227 3155 2742 4099 61 0 2 chr2 173762828 173763355 -79493228 - L1PA5 LINE L1 -5 6149 5624 982 290 94 51 chr2 173763455 173764485 -79492098 - L1MEc LINE L1 -3142 3240 2189 720 243 35 0 chr2 173764673 173764875 -79491708 - L1MEc LINE L1 -4979 1405 1197 451 335 63 81 chr2 173765699 173766293 -79490290 - L2 LINE L2 0 3272 2686 26 64 0 0 chr2 173767605 173767652 -79488931 + AT_rich Low_complexity Low_complexity 1 47 0 2149 193 117 2 chr2 173767757 173768364 -79488219 - SATR1 Satellite Satellite -2 676 1 28 0 0 0 chr2 173768364 173768392 -79488191 + AT_rich Low_complexity Low_complexity 1 28 0 409 205 5 63 chr2 173768400 173768590 -79487993 + (TAA)n Simple_repeat Simple_repeat 1 179 0 277 200 0 0 chr2 173768593 173768643 -79487940 - SATR1 Satellite Satellite -410 60 11 47 33 0 0 chr2 173768646 173768707 -79487876 + AT_rich Low_complexity Low_complexity 1 61 0 1935 193 114 1 chr2 173768707 173769182 -79487401 + SATR1 Satellite Satellite 1 528 -101 503 264 39 0 chr2 173769286 173769464 -79487119 + L1MB8 LINE L1 3035 3219 -2927 1073 61 0 0 chr2 173769473 173769604 -79486979 + AluY SINE Alu 164 294 -17 2649 222 44 66 chr2 173769680 173770630 -79485953 + L1MB8 LINE L1 3499 4427 -1719 2754 183 34 0 chr2 173770711 173771235 -79485348 + L1MB8 LINE L1 5451 5992 -186 1477 246 37 38 chr2 173772210 173772317 -79484266 + L1M4b LINE L1 1165 1271 -5584 905 228 86 100 chr2 173772317 173772827 -79483756 + MLT1D LTR MaLR 3 505 0 1477 246 37 38 chr2 173772827 173773311 -79483272 + L1M4b LINE L1 1271 1755 -5100 5936 210 29 12 chr2 173773414 173774971 -79481612 + L1M1 LINE L1 3188 4771 -1375 1890 146 28 56 chr2 173774970 173775307 -79481276 + L1M1 LINE L1 5228 5551 -752 * 2330 98 3 0 chr2 173775307 173775614 -79480969 + AluY SINE Alu 1 308 -3 1890 146 28 56 chr2 173775614 173775711 -79480872 + L1M1 LINE L1 5551 5649 -654 2129 178 110 6 chr2 173775813 173777318 -79479265 + SATR1 Satellite Satellite 1 1661 -173 2434 39 23 6 chr2 173777941 173778460 -79478123 - L1P2 LINE L1 -565 5589 5065 * 5776 52 79 0 chr2 173778456 173779263 -79477320 + L1P2 LINE L1 4203 5073 -1073 1175 241 85 55 chr2 173779265 173780386 -79476197 - L1M4 LINE L1 -3625 2345 1191 788 252 0 36 chr2 173780513 173780735 -79475848 - L1M4 LINE L1 -4994 897 684 648 322 52 11 chr2 173780736 173781075 -79475508 - L1M4 LINE L1 -5379 512 240 421 303 21 86 chr2 173781098 173781425 -79475158 - MER77 LTR ERV1 -296 309 4 676 254 97 0 chr2 173783965 173784129 -79472454 + MLT1A1 LTR MaLR 160 345 -20 195 42 0 0 chr2 173784129 173784153 -79472430 + (TTG)n Simple_repeat Simple_repeat 3 26 0 676 254 97 0 chr2 173784153 173784173 -79472410 + MLT1A1 LTR MaLR 345 362 -3 215 191 0 0 chr2 173784380 173784422 -79472161 - MIR3 SINE MIR -17 191 150 23 54 0 0 chr2 173785349 173785386 -79471197 + AT_rich Low_complexity Low_complexity 1 37 0 3886 185 33 23 chr2 173786557 173787477 -79469106 - L1MA8 LINE L1 -3 6288 5360 1749 170 7 14 chr2 173787600 173787894 -79468689 - AluSg SINE Alu -18 292 1 900 247 0 0 chr2 173788396 173788635 -79467948 - L1P LINE L1 -1020 5126 4888 1998 147 3 9 chr2 173788643 173788977 -79467606 + L1PB3 LINE L1 5820 6151 -3 433 325 152 0 chr2 173789232 173789423 -79467160 - MIR SINE MIR -29 233 14 206 247 214 45 chr2 173789760 173789914 -79466669 - MIR SINE MIR -6 256 77 335 274 24 0 chr2 173790241 173790325 -79466258 - MIR SINE MIR 0 262 177 186 195 0 208 chr2 173790412 173790489 -79466094 + MER5A DNA MER1_type 65 125 -64 2152 134 3 0 chr2 173790501 173790799 -79465784 - AluSx SINE Alu -13 299 1 396 88 0 0 chr2 173792061 173792118 -79464465 + (TG)n Simple_repeat Simple_repeat 2 58 0 2612 84 6 8 chr2 173792158 173792514 -79464069 - THE1A LTR MaLR 0 355 1 11322 105 11 0 chr2 173792514 173794076 -79462507 - THE1A-int LTR MaLR 0 1580 1 2650 99 0 0 chr2 173794076 173794431 -79462152 - THE1A LTR MaLR 0 355 1 437 345 52 22 chr2 173799540 173799772 -79456811 - MIR SINE MIR -4 258 20 360 0 0 0 chr2 173799885 173799925 -79456658 + (TG)n Simple_repeat Simple_repeat 2 41 0 23 0 0 0 chr2 173799962 173799985 -79456598 + AT_rich Low_complexity Low_complexity 1 23 0 2254 161 102 3 chr2 173800366 173802200 -79454383 - SATR1 Satellite Satellite -1 2015 1 273 288 123 34 chr2 173802851 173802997 -79453586 - L2 LINE L2 -2 3311 3153 1126 143 22 14 chr2 173803009 173803232 -79453351 - MER57B LTR ERV1 -6 428 204 3437 158 70 33 chr2 173803235 173803574 -79453009 - MER57B-int LTR ERV1 -3698 4118 3793 2065 132 7 0 chr2 173803574 173803863 -79452720 - AluSq SINE Alu -22 291 1 3437 158 70 33 chr2 173803863 173805082 -79451501 - MER57B-int LTR ERV1 -4023 3793 288 * 3858 147 24 21 chr2 173805076 173805749 -79450834 - MER57B-int LTR ERV1 -6862 675 1 2358 165 11 16 chr2 173805749 173806185 -79450398 - MER57B LTR ERV1 0 434 1 353 349 150 15 chr2 173806188 173806561 -79450022 - L2 LINE L2 -175 3138 2710 1456 207 31 17 chr2 173807508 173807866 -79448717 + MLT1A1 LTR MaLR 3 365 0 2443 129 5 16 chr2 173808436 173808815 -79447768 - THE1C LTR MaLR 0 375 1 1703 231 62 2 chr2 173808972 173809427 -79447156 + MER21B LTR ERV1 321 802 -61 305 102 0 0 chr2 173810243 173810292 -79446291 - MLT2B1 LTR ERVL -14 506 458 40250 42 23 1 chr2 173810394 173815857 -79440726 - L1P1 LINE L1 -558 5597 13 3768 188 40 17 chr2 173816290 173817408 -79439175 - L1MB1 LINE L1 -1 6167 5023 1296 60 5 0 chr2 173817528 173817712 -79438871 + L1P LINE L1 4631 4815 -1331 38094 69 10 3 chr2 173817916 173824018 -79432565 - L1PA5 LINE L1 0 6154 11 1298 99 0 16 chr2 173824320 173824502 -79432081 - AluSq SINE Alu -134 179 1 2552 178 31 25 chr2 173824617 173825094 -79431489 + MLT2B1 LTR ERVL 1 480 -40 200 182 0 0 chr2 173825101 173825134 -79431449 + (TG)n Simple_repeat Simple_repeat 2 34 0 1804 198 15 3 chr2 173825135 173825474 -79431109 - MER2 DNA MER2_type 0 344 2 441 0 0 0 chr2 173825474 173825523 -79431060 + (CA)n Simple_repeat Simple_repeat 2 50 0 279 0 0 0 chr2 173825522 173825553 -79431030 + (GA)n Simple_repeat Simple_repeat 2 32 0 * 2055 134 3 3 chr2 173825553 173825866 -79430717 - Tigger3(Golem) DNA MER2_type -7 3022 2710 278 296 42 0 chr2 173825854 173825925 -79430658 - Tigger3(Golem) DNA MER2_type -2947 82 9 * 1024 181 110 9 chr2 173826001 173826228 -79430355 + ERVL-B1 LTR ERVL 2 251 -5513 4326 205 30 0 chr2 173826339 173827318 -79429265 - L1 LINE L1 -753 5393 4386 348 91 18 0 chr2 173827318 173827373 -79429210 - MADE1 DNA Mariner 0 80 25 420 150 58 42 chr2 173827376 173827496 -79429087 - L1 LINE L1 -1759 4387 4266 4906 151 55 15 chr2 173827503 173828363 -79428220 - MER4D LTR ERV1 -9 894 1 4527 203 39 36 chr2 173828363 173829982 -79426601 - L1 LINE L1 -1876 4270 2503 28 61 0 0 chr2 173829986 173830035 -79426548 + AT_rich Low_complexity Low_complexity 1 49 0 901 291 52 21 chr2 173830258 173830677 -79425906 - L2 LINE L2 -637 2677 2246 256 316 9 35 chr2 173832002 173832116 -79424467 + MIR SINE MIR 91 201 -61 24 0 0 0 chr2 173832203 173832227 -79424356 + AT_rich Low_complexity Low_complexity 1 24 0 428 252 114 24 chr2 173832708 173832831 -79423752 - L2 LINE L2 0 3313 3180 561 310 21 10 chr2 173832837 173833060 -79423523 - L2 LINE L2 -307 3006 2782 2788 216 20 27 chr2 173834502 173834944 -79421639 - L1 LINE L1 -758 5592 5155 2316 88 0 3 chr2 173834944 173835238 -79421345 - AluY SINE Alu -18 293 1 2788 216 20 27 chr2 173835238 173835490 -79421093 - L1 LINE L1 -1195 5155 4903 3511 189 27 0 chr2 173835491 173836186 -79420397 + L1MB1 LINE L1 5437 6150 -18 357 62 0 0 chr2 173836640 173836688 -79419895 + (CA)n Simple_repeat Simple_repeat 1 48 0 22 35 0 0 chr2 173837366 173837395 -79419188 + AT_rich Low_complexity Low_complexity 1 29 0 236 205 137 26 chr2 173839139 173839256 -79417327 + MER65B LTR ERV1 325 454 -77 204 40 0 0 chr2 173839380 173839405 -79417178 + (TG)n Simple_repeat Simple_repeat 2 26 0 3246 160 23 3 chr2 173839772 173840702 -79415881 + L1P4 LINE L1 4830 5782 -379 321 316 181 38 chr2 173840937 173841406 -79415177 - L2 LINE L2 -394 2920 2385 2362 202 38 58 chr2 173844401 173845162 -79411421 + L1MD3 LINE L1 7054 7995 0 23 54 0 0 chr2 173845215 173845252 -79411331 + AT_rich Low_complexity Low_complexity 1 37 0 283 262 75 117 chr2 173847696 173847910 -79408673 + MIR SINE MIR 2 206 -56 199 272 54 43 chr2 173848408 173848500 -79408083 - MIR SINE MIR -111 151 59 5634 99 29 13 chr2 173848626 173849452 -79407131 - L1PA11 LINE L1 -1 6173 5335 3422 201 66 15 chr2 173849552 173850410 -79406173 - L1 LINE L1 -2161 4189 3288 416 121 0 0 chr2 173850448 173850506 -79406077 - AluSc SINE Alu -14 295 238 5823 77 6 64 chr2 173850510 173851385 -79405198 - LTR12 LTR ERV1 -2 824 1 5689 96 3 0 chr2 173851385 173852157 -79404426 - HERV9 LTR ERV1 0 8399 7626 1090 96 0 0 chr2 173852155 173852312 -79404271 - HERV17 LTR ERV1 -5156 1740 1584 * 1945 114 48 32 chr2 173852289 173853118 -79403465 - HERV17 LTR ERV1 -3380 4980 877 * 14176 109 9 9 chr2 173853117 173855950 -79400633 - HERV17 LTR ERV1 -5427 2972 58 5595 80 12 71 chr2 173855998 173856875 -79399708 - LTR12 LTR ERV1 0 826 1 1851 113 0 0 chr2 173856875 173857114 -79399469 - AluSc SINE Alu -70 239 1 707 269 41 0 chr2 173857120 173857317 -79399266 - L1 LINE L1 -4957 1324 1120 1928 147 7 0 chr2 173857335 173857614 -79398969 - AluSx SINE Alu -31 281 1 601 372 40 28 chr2 173857987 173858490 -79398093 - L1 LINE L1 -5770 511 3 306 256 25 25 chr2 173859775 173859935 -79396648 + (TA)n Simple_repeat Simple_repeat 1 160 0 21 0 0 0 chr2 173860304 173860325 -79396258 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 173864195 173864220 -79392363 + AT_rich Low_complexity Low_complexity 1 25 0 261 272 133 6 chr2 173865151 173865311 -79391272 + L1ME LINE L1 5582 5764 -357 1877 140 58 0 chr2 173865317 173865610 -79390973 + AluSx SINE Alu 1 310 -2 207 0 0 0 chr2 173865643 173865666 -79390917 + (CA)n Simple_repeat Simple_repeat 2 24 0 273 57 0 0 chr2 173865829 173865864 -79390719 + (CA)n Simple_repeat Simple_repeat 2 36 0 652 289 70 19 chr2 173866038 173866294 -79390289 - MLT1J LTR MaLR -9 502 234 198 50 75 0 chr2 173866493 173866533 -79390050 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 23 33 0 0 chr2 173866588 173866618 -79389965 + AT_rich Low_complexity Low_complexity 1 30 0 245 169 17 0 chr2 173867351 173867410 -79389173 + CT-rich Low_complexity Low_complexity 1 60 0 590 250 172 17 chr2 173868360 173868592 -79387991 + MLT1F1 LTR MaLR 156 423 -144 265 176 20 0 chr2 173869055 173869106 -79387477 + LTR50 LTR ERVL 2 53 -742 * 2657 163 11 8 chr2 173869103 173869575 -79387008 - MER50 LTR ERV1 -218 516 44 324 276 123 50 chr2 173869567 173869828 -79386755 + LTR50 LTR ERVL 510 789 -6 * 1898 196 99 22 chr2 173869874 173870329 -79386254 + LTR2B LTR ERV1 1 490 0 9721 167 19 5 chr2 173870984 173873604 -79382979 - L1PA13 LINE L1 -7 6807 4162 710 256 53 14 chr2 173873623 173873830 -79382753 + L1PA13 LINE L1 592 806 -5981 * 1884 190 13 24 chr2 173873823 173874287 -79382296 + L1P LINE L1 2946 3404 -2742 854 130 40 17 chr2 173874423 173874600 -79381983 - L1MA8 LINE L1 -19 6272 6092 1351 193 79 57 chr2 173874609 173874925 -79381658 - L1PA13 LINE L1 -6360 427 105 638 117 0 11 chr2 173874949 173875043 -79381540 + MER4A LTR ERV1 6 98 -566 1769 117 177 76 chr2 173875043 173875410 -79381173 + MER4A LTR ERV1 261 664 0 4501 136 41 40 chr2 173875410 173876266 -79380317 + LTR49-int LTR ERV1 5475 6331 0 3264 154 35 3 chr2 173876267 173876843 -79379740 + LTR49 LTR ERV1 2 595 0 6230 183 51 10 chr2 173876843 173878241 -79378342 - L1 LINE L1 -1275 4871 3417 216 340 100 20 chr2 173878268 173878368 -79378215 - MIR SINE MIR -109 153 46 183 351 45 9 chr2 173878570 173878681 -79377902 + MIR SINE MIR 86 200 -62 473 248 169 40 chr2 173879271 173879596 -79376987 - MLT1J LTR MaLR -21 468 120 336 281 182 20 chr2 173879816 173880019 -79376564 - L1 LINE L1 -3609 2537 2302 2470 87 0 0 chr2 173881038 173881350 -79375233 + AluSx SINE Alu 1 312 0 832 306 4 8 chr2 173881612 173881864 -79374719 - MIR SINE MIR 0 262 12 1530 204 0 17 chr2 173881890 173882213 -79374370 + AluJb SINE Alu 1 318 0 196 319 26 71 chr2 173882281 173882394 -79374189 - MIR SINE MIR 0 262 155 300 278 21 21 chr2 173882908 173883005 -79373578 + L1MC4 LINE L1 6616 6712 -1330 195 287 191 43 chr2 173883005 173883099 -79373484 - MIR SINE MIR -98 164 57 1784 180 7 10 chr2 173883134 173883439 -79373144 + AluJo SINE Alu 1 304 -8 732 102 31 0 chr2 173883440 173883568 -79373015 + GA-rich Low_complexity Low_complexity 1 132 0 305 365 94 22 chr2 173883707 173883888 -79372695 - L2 LINE L2 -672 2642 2449 2039 285 95 23 chr2 173884157 173884909 -79371674 - L1M4 LINE L1 -1456 4690 3800 1602 170 48 14 chr2 173884909 173885203 -79371380 - AluJb SINE Alu -8 304 1 2039 285 95 23 chr2 173885203 173885617 -79370966 - L1M4 LINE L1 -2346 3800 3417 2247 78 41 3 chr2 173885650 173885944 -79370639 - AluSg SINE Alu -5 305 1 611 313 59 55 chr2 173886061 173886779 -79369804 - ERVL LTR ERVL -1494 4160 3450 865 296 12 16 chr2 173886779 173887022 -79369561 - LTR16C LTR ERVL -181 310 69 1450 206 41 0 chr2 173887317 173887608 -79368975 - AluJo SINE Alu -5 307 5 22 35 0 0 chr2 173887969 173887998 -79368585 + AT_rich Low_complexity Low_complexity 1 29 0 23 54 0 0 chr2 173888159 173888196 -79368387 + AT_rich Low_complexity Low_complexity 1 37 0 233 324 83 28 chr2 173888683 173888828 -79367755 + MLT1L LTR MaLR 1 153 -462 4239 134 9 16 chr2 173888949 173890187 -79366396 + L1P4 LINE L1 4545 5766 -395 455 211 62 2 chr2 173890204 173890354 -79366229 + L1M4 LINE L1 5325 5480 -690 369 134 73 7 chr2 173890457 173890767 -79365816 + (TTATA)n Simple_repeat Simple_repeat 1 330 0 985 164 13 78 chr2 173891745 173891976 -79364607 + L1MC3 LINE L1 6712 6927 -858 29 0 0 0 chr2 173894323 173894352 -79362231 + AT_rich Low_complexity Low_complexity 1 29 0 313 325 53 0 chr2 173894367 173894481 -79362102 + L2 LINE L2 3148 3267 -5 189 268 0 0 chr2 173895048 173895104 -79361479 + (TG)n Simple_repeat Simple_repeat 2 57 0 31 26 0 0 chr2 173895365 173895403 -79361180 + AT_rich Low_complexity Low_complexity 1 38 0 1893 251 29 21 chr2 173895536 173896157 -79360426 - L1M4c LINE L1 -3425 2957 2329 318 296 37 15 chr2 173896159 173896294 -79360289 - L1M4c LINE L1 -4214 2170 2033 5692 87 8 10 chr2 173896294 173897252 -79359331 - L1P3 LINE L1 -634 5520 4570 2219 116 0 3 chr2 173897352 173897663 -79358920 - AluSx SINE Alu -2 310 1 207 303 101 0 chr2 173897798 173897887 -79358696 + MIR SINE MIR 37 134 -128 270 184 23 23 chr2 173898406 173898493 -79358090 + (TATG)n Simple_repeat Simple_repeat 2 88 0 24 0 0 0 chr2 173899036 173899060 -79357523 + AT_rich Low_complexity Low_complexity 1 24 0 404 313 125 39 chr2 173899966 173900513 -79356070 - L2 LINE L2 -154 3159 2542 1708 124 14 37 chr2 173900835 173901218 -79355365 - Charlie3 DNA MER1_type 0 2712 1 228 271 57 0 chr2 173902831 173902901 -79353682 + Charlie8 DNA MER1_type 2341 2414 -3 463 10 106 0 chr2 173903863 173903967 -79352616 + (TA)n Simple_repeat Simple_repeat 2 116 0 52 50 0 0 chr2 173903967 173904047 -79352536 + AT_rich Low_complexity Low_complexity 1 80 0 274 237 11 65 chr2 173905306 173905399 -79351184 + L2 LINE L2 3226 3313 0 2192 194 34 74 chr2 173905880 173906558 -79350025 - L1MD3 LINE L1 -84 7911 7026 309 185 0 0 chr2 173906660 173906725 -79349858 + (TA)n Simple_repeat Simple_repeat 2 66 0 477 373 69 45 chr2 173906856 173907485 -79349098 + L2 LINE L2 2612 3256 -16 577 258 67 27 chr2 173908447 173908613 -79347970 - MIR SINE MIR -25 183 8 23 54 0 0 chr2 173910132 173910169 -79346414 + AT_rich Low_complexity Low_complexity 1 37 0 336 284 43 35 chr2 173912132 173912273 -79344310 + MIR SINE MIR 66 207 -55 499 279 0 0 chr2 173912722 173912851 -79343732 - L1PB4 LINE L1 -7 6149 6021 268 370 99 30 chr2 173915608 173915970 -79340613 - L2 LINE L2 -470 2844 2458 207 226 19 19 chr2 173917419 173917472 -79339111 - L2 LINE L2 0 3313 3261 246 338 125 12 chr2 173917852 173918012 -79338571 - L2 LINE L2 -470 2844 2667 227 258 237 43 chr2 173918506 173918599 -79337984 + MIR SINE MIR 40 150 -58 22 35 0 0 chr2 173919529 173919558 -79337025 + AT_rich Low_complexity Low_complexity 1 29 0 296 311 135 5 chr2 173919618 173919765 -79336818 - MIR SINE MIR -65 143 30 303 320 32 32 chr2 173919837 173919962 -79336621 - MER5A DNA MER1_type -1 188 64 180 0 0 0 chr2 173920535 173920555 -79336028 + (A)n Simple_repeat Simple_repeat 1 20 0 393 70 0 0 chr2 173920649 173920706 -79335877 + (TG)n Simple_repeat Simple_repeat 1 57 0 5332 250 80 24 chr2 173920878 173923196 -79333387 + L1M4b LINE L1 6 2603 -4535 180 152 0 0 chr2 173923270 173923303 -79333280 + GA-rich Low_complexity Low_complexity 2 34 0 1162 193 43 12 chr2 173923462 173923716 -79332867 - LTR22 LTR ERVK 0 580 319 282 111 0 252 chr2 173923817 173923936 -79332647 + L1MC3 LINE L1 6272 7772 -13 2063 104 0 66 chr2 173923936 173924253 -79332330 + AluSq SINE Alu 1 296 -17 197 326 152 0 chr2 173924532 173924624 -79331959 + MIR3 SINE MIR 97 202 -6 292 286 31 20 chr2 173925579 173925677 -79330906 + MERVL LTR ERVL 4357 4455 -1030 2509 263 88 15 chr2 173925769 173926118 -79330465 - L1ME2 LINE L1 -27 6137 5815 192 77 0 0 chr2 173926118 173926144 -79330439 + (CATTC)n Simple_repeat Simple_repeat 2 27 0 2509 263 88 15 chr2 173926144 173927241 -79329342 - L1ME2 LINE L1 -349 5815 4590 381 43 0 0 chr2 173928023 173928070 -79328513 + (CA)n Simple_repeat Simple_repeat 2 48 0 447 253 5 104 chr2 173928741 173928943 -79327640 + L1ME3A LINE L1 5985 6166 -4 1366 166 19 15 chr2 173929235 173929494 -79327089 - LTR22 LTR ERVK -320 260 1 21 36 0 0 chr2 173929539 173929567 -79327016 + AT_rich Low_complexity Low_complexity 1 28 0 3003 256 118 24 chr2 173929705 173931231 -79325352 + L1M4b LINE L1 2679 4345 -2612 321 234 91 0 chr2 173931236 173931313 -79325270 - MLT1F LTR MaLR -458 84 1 278 224 0 26 chr2 173933143 173933219 -79323364 + L1M4b LINE L1 5396 5469 -1488 189 151 57 0 chr2 173933304 173933357 -79323226 + GA-rich Low_complexity Low_complexity 5 60 0 310 319 137 17 chr2 173933366 173933607 -79322976 + L1M4b LINE L1 5503 5772 -1185 959 114 0 0 chr2 173933607 173933739 -79322844 + AluSg/x SINE Alu 161 292 -20 351 321 138 0 chr2 173933747 173933971 -79322612 + L1M4b LINE L1 5861 6115 -842 1625 208 28 77 chr2 173934008 173934541 -79322042 - L1MB7 LINE L1 -16 6168 5662 2411 84 26 55 chr2 173934546 173934925 -79321658 - L1PA14 LINE L1 -3 6158 5791 7046 183 15 10 chr2 173934925 173936366 -79320217 + L1P LINE L1 2908 4354 -1792 2513 153 34 0 chr2 173936874 173937286 -79319297 + MSTB LTR MaLR 1 426 0 720 149 155 20 chr2 173937493 173937641 -79318942 + MLT1E LTR MaLR 426 593 0 25 31 0 0 chr2 173939444 173939476 -79317107 + AT_rich Low_complexity Low_complexity 1 32 0 222 208 13 26 chr2 173940759 173940836 -79315747 + (TTA)n Simple_repeat Simple_repeat 3 78 0 438 295 36 71 chr2 173940868 173941399 -79315184 + L1MC4 LINE L1 6488 7084 -801 213 296 0 0 chr2 173941872 173941943 -79314640 + A-rich Low_complexity Low_complexity 1 71 0 888 251 58 64 chr2 173942071 173942413 -79314170 + MLT1D LTR MaLR 1 340 -165 22 0 0 0 chr2 173943247 173943269 -79313314 + AT_rich Low_complexity Low_complexity 1 22 0 1058 197 81 1 chr2 173943412 173943630 -79312953 + MLT2D LTR ERVL 1 228 -186 226 139 93 0 chr2 173943673 173943716 -79312867 + MLT2B1 LTR ERVL 474 520 0 444 272 65 24 chr2 173943748 173943917 -79312666 - L2 LINE L2 -1345 1969 1794 1673 199 85 45 chr2 173944240 173944712 -79311871 + MLT1D LTR MaLR 1 491 -14 275 286 0 0 chr2 173945865 173945935 -79310648 + T-rich Low_complexity Low_complexity 5 74 0 22 0 0 0 chr2 173946896 173946918 -79309665 + AT_rich Low_complexity Low_complexity 1 22 0 379 233 11 22 chr2 173947449 173947539 -79309044 - MIR SINE MIR -108 154 66 334 278 53 45 chr2 173947717 173947850 -79308733 + L2 LINE L2 3175 3308 -5 25 31 0 0 chr2 173948163 173948195 -79308388 + AT_rich Low_complexity Low_complexity 1 32 0 236 286 150 45 chr2 173948195 173948328 -79308255 - MIR SINE MIR -11 251 105 1104 183 54 5 chr2 173948748 173948972 -79307611 - L1MC2 LINE L1 -108 6236 6002 481 305 42 21 chr2 173950349 173950588 -79305995 + LTR16C LTR ERVL 240 483 -8 181 400 8 8 chr2 173951102 173951222 -79305361 + L2 LINE L2 2365 2484 -830 3375 168 40 35 chr2 173951237 173951672 -79304911 - L1MA8 LINE L1 -36 6255 5813 225 0 0 0 chr2 173951672 173951697 -79304886 + (TG)n Simple_repeat Simple_repeat 2 26 0 3375 168 40 35 chr2 173951697 173951957 -79304626 - L1MA8 LINE L1 -478 5813 5556 27 0 0 0 chr2 173951984 173952011 -79304572 + AT_rich Low_complexity Low_complexity 1 27 0 43586 42 3 1 chr2 173952011 173958148 -79298435 - L1PA3 LINE L1 -3 6152 9 2235 181 11 20 chr2 173958134 173958848 -79297735 - L1MA8 LINE L1 -717 5574 4871 * 4047 213 62 11 chr2 173958872 173959846 -79296737 - L1MA7 LINE L1 0 6291 5269 2024 163 11 17 chr2 173959846 173960044 -79296539 - MER7A DNA MER2_type -2692 346 151 2287 101 30 41 chr2 173960044 173960412 -79296171 + THE1B LTR MaLR 1 364 0 2024 163 11 17 chr2 173960412 173960563 -79296020 - MER7A DNA MER2_type -2887 151 1 519 213 9 0 chr2 173960563 173960671 -79295912 - L1MA7 LINE L1 -876 5270 5162 3454 161 9 5 chr2 173960672 173961326 -79295257 - L1MA8 LINE L1 -1272 4874 4218 267 190 50 10 chr2 173961328 173961428 -79295155 - L1MA8 LINE L1 -2877 3269 3166 363 162 0 0 chr2 173961430 173961498 -79295085 + L1 LINE L1 4403 4470 -1676 1012 257 12 9 chr2 173961515 173961858 -79294725 - L1MA8 LINE L1 -2985 3161 2818 630 306 60 42 chr2 173962995 173963427 -79293156 + MLT1J1 LTR MaLR 7 446 0 210 37 0 0 chr2 173963857 173963884 -79292699 + (TA)n Simple_repeat Simple_repeat 2 28 0 29 0 0 0 chr2 173965123 173965152 -79291431 + AT_rich Low_complexity Low_complexity 1 29 0 1995 99 0 89 chr2 173965180 173965504 -79291079 - AluSp SINE Alu -14 299 5 184 300 150 30 chr2 173966869 173966969 -79289614 + MIR SINE MIR 23 134 -74 1301 183 82 57 chr2 173967737 173968104 -79288479 - MER51B LTR ERV1 0 377 2 282 56 0 0 chr2 173968220 173968256 -79288327 + (TGGA)n Simple_repeat Simple_repeat 2 37 0 2333 87 7 0 chr2 173968720 173969020 -79287563 + AluSp SINE Alu 1 302 -11 213 224 176 24 chr2 173969205 173969290 -79287293 + MIR SINE MIR 156 253 -9 211 245 85 64 chr2 173970455 173970549 -79286034 + MER5C DNA MER1_type 29 124 -200 219 167 14 97 chr2 173970692 173970764 -79285819 + MER5C DNA MER1_type 259 324 0 1306 308 12 12 chr2 173970934 173971349 -79285234 + LTR16A LTR ERVL 35 449 -1 599 256 154 0 chr2 173972006 173972162 -79284421 + MER5A DNA MER1_type 10 189 0 1095 201 107 10 chr2 173973156 173973455 -79283128 - L1MEc LINE L1 -6057 339 12 1078 243 73 30 chr2 173973674 173974153 -79282430 - MLT1E LTR MaLR -2 591 1 2060 144 0 0 chr2 173974191 173974554 -79282029 - AluSx SINE Alu 0 363 1 28 29 0 0 chr2 173974563 173974598 -79281985 + AT_rich Low_complexity Low_complexity 1 35 0 578 364 66 36 chr2 173975649 173976345 -79280238 + L2 LINE L2 2170 2886 -428 282 303 75 45 chr2 173977307 173977574 -79279009 + L1MEd LINE L1 276 550 -5569 386 259 157 61 chr2 173977671 173978034 -79278549 + L1MEd LINE L1 685 1082 -5037 261 280 74 32 chr2 173978062 173978251 -79278332 + L1MEd LINE L1 1176 1372 -4938 1970 140 3 0 chr2 173978644 173978937 -79277646 + AluSx SINE Alu 1 294 -18 556 157 77 18 chr2 173979386 173979590 -79276993 + L1MC3 LINE L1 6735 7038 -747 257 282 0 14 chr2 173979604 173979675 -79276908 + MLT1F1 LTR MaLR 45 114 -453 3025 187 10 10 chr2 173979681 173980264 -79276319 + L1MC3 LINE L1 7184 7766 -19 21 57 0 0 chr2 173980381 173980416 -79276167 + AT_rich Low_complexity Low_complexity 1 35 0 876 195 38 24 chr2 173980876 173980914 -79275669 - MLT2B1 LTR ERVL 0 520 484 234 91 0 0 chr2 173980914 173980947 -79275636 + (TG)n Simple_repeat Simple_repeat 2 34 0 876 195 38 24 chr2 173980947 173981118 -79275465 - MLT2B1 LTR ERVL -36 484 308 1644 249 35 9 chr2 173981570 173982063 -79274520 + LTR51 LTR ERV1 222 923 0 1649 258 27 30 chr2 173982832 173983270 -79273313 + MER21B LTR ERV1 12 448 -415 13959 45 3 1 chr2 174033274 174035218 -79221365 - L1P2 LINE L1 -545 5609 3661 12429 29 0 3 chr2 174035318 174037346 -79219237 + L1PA3 LINE L1 3903 5924 -231 21 0 0 0 chr2 174037592 174037613 -79218970 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 174038167 174038189 -79218394 + AT_rich Low_complexity Low_complexity 1 22 0 262 301 57 46 chr2 174039020 174039183 -79217400 + MIR SINE MIR 27 185 -58 2382 77 3 13 chr2 174039607 174039918 -79216665 + AluY SINE Alu 3 310 -1 281 341 58 0 chr2 174041377 174041515 -79215068 + MIR SINE MIR 57 202 -60 270 297 59 30 chr2 174041616 174041717 -79214866 + MIR3 SINE MIR 66 169 -39 349 280 136 37 chr2 174042370 174042543 -79214040 + MIR SINE MIR 2 201 -61 413 36 18 0 chr2 174042543 174042598 -79213985 + (TAGA)n Simple_repeat Simple_repeat 3 58 0 349 280 136 37 chr2 174042598 174042638 -79213945 + MIR SINE MIR 201 236 -26 476 324 49 3 chr2 174043081 174043271 -79213312 + MIR SINE MIR 7 262 0 634 297 52 62 chr2 174043397 174043781 -79212802 - HAL1 LINE L1 -1291 1216 837 356 230 46 0 chr2 174044493 174044580 -79212003 + MER5A DNA MER1_type 28 118 -71 22 0 0 0 chr2 174044974 174044996 -79211587 + AT_rich Low_complexity Low_complexity 1 22 0 7433 31 13 0 chr2 174045683 174046605 -79209978 + L1P LINE L1 2891 3824 -2322 24051 72 5 1 chr2 174046705 174049884 -79206699 - L1P LINE L1 -2659 3487 297 620 85 0 0 chr2 174049884 174049966 -79206617 - L1P LINE L1 -6063 83 2 880 247 39 9 chr2 174049977 174050208 -79206375 - MLT1H LTR MaLR -311 238 1 746 242 104 22 chr2 174050370 174050756 -79205827 + MLT1D LTR MaLR 3 446 -59 2066 92 0 7 chr2 174050761 174051033 -79205550 - AluY SINE Alu -5 306 37 1939 136 17 3 chr2 174051150 174051451 -79205132 + AluSx SINE Alu 3 307 -5 1575 197 132 28 chr2 174051484 174051763 -79204820 - MER67D LTR ERV1 -4 510 261 416 198 0 31 chr2 174051763 174051859 -79204724 - L1MA3 LINE L1 -5 6300 6208 1575 197 132 28 chr2 174051859 174052041 -79204542 - MER67D LTR ERV1 -253 261 1 540 276 33 43 chr2 174052795 174053005 -79203578 + L3 LINE CR1 1198 1405 -172 257 194 97 0 chr2 174053686 174053758 -79202825 - MER117 DNA MER1_type -117 80 2 1964 125 7 0 chr2 174054827 174055135 -79201448 - AluY SINE Alu 0 310 1 223 327 26 39 chr2 174055159 174055312 -79201271 - MER5A DNA MER1_type -4 185 35 * 274 316 19 45 chr2 174055176 174055331 -79201252 + MER5B DNA MER1_type 25 175 -3 279 330 25 51 chr2 174059033 174059151 -79197432 + MER5A DNA MER1_type 2 116 -73 477 314 75 46 chr2 174059250 174059706 -79196877 - L2 LINE L2 -5 3308 2840 560 226 0 0 chr2 174060668 174060770 -79195813 + Tigger3b DNA MER2_type 1 102 -1129 * 916 163 0 59 chr2 174060768 174060971 -79195612 + Tigger3b DNA MER2_type 274 464 -767 763 278 67 94 chr2 174061306 174062334 -79194249 - L1MEc LINE L1 -4187 2209 1210 471 306 15 15 chr2 174062548 174062744 -79193839 + L1MEc LINE L1 59 254 -6142 385 247 0 0 chr2 174062756 174062833 -79193750 + L1MEc LINE L1 565 641 -5755 1282 265 39 85 chr2 174062862 174063647 -79192936 - L1M4 LINE L1 -1052 5094 4361 1468 167 73 0 chr2 174063647 174063893 -79192690 + AluJb SINE Alu 1 264 -48 1282 265 39 85 chr2 174063893 174064083 -79192500 - L1M4 LINE L1 -1785 4361 4164 1361 278 51 20 chr2 174064296 174064882 -79191701 - L1M4 LINE L1 -1956 4190 3587 243 224 45 0 chr2 174065096 174065163 -79191420 - L1MC4a LINE L1 -492 7316 7247 629 255 148 0 chr2 174065570 174065766 -79190817 + L1MC4a LINE L1 7506 7730 -78 205 100 0 50 chr2 174066710 174066750 -79189833 + (CAAAAA)n Simple_repeat Simple_repeat 6 43 0 553 341 60 9 chr2 174067120 174067337 -79189246 - MIR SINE MIR -17 245 18 486 203 34 17 chr2 174067488 174067606 -79188977 + MER104 DNA Tc2 14 133 -47 519 306 45 18 chr2 174067673 174067895 -79188688 - MIR SINE MIR -15 247 20 1051 187 35 0 chr2 174068188 174068386 -79188197 - L1MC/D LINE L1 -670 5663 5459 379 275 75 0 chr2 174068426 174068546 -79188037 - MER94 DNA DNA -3 131 3 545 91 0 0 chr2 174069675 174069752 -79186831 + Alu SINE Alu 221 297 -15 204 179 0 0 chr2 174069777 174069816 -79186767 + CT-rich Low_complexity Low_complexity 2 40 0 514 305 67 42 chr2 174070561 174070846 -79185737 - L3 LINE CR1 -11 1566 1275 267 115 0 0 chr2 174072532 174072584 -79183999 + MER4B-int LTR ERV1 1145 1196 -5562 312 70 0 0 chr2 174072584 174072627 -79183956 + (TA)n Simple_repeat Simple_repeat 1 43 0 206 292 14 28 chr2 174072683 174072755 -79183828 + L2 LINE L2 3243 3313 0 1612 187 0 33 chr2 174072763 174073068 -79183515 + AluJo SINE Alu 1 295 -17 1527 218 33 90 chr2 174074256 174074769 -79181814 - MLT1D LTR MaLR -1 504 21 2146 253 77 49 chr2 174076183 174077126 -79179457 - L1ME3 LINE L1 -8 6154 5238 1577 178 24 24 chr2 174077126 174077424 -79179159 - AluJo SINE Alu -14 298 1 2146 253 77 49 chr2 174077424 174077977 -79178606 - L1ME3 LINE L1 -924 5238 4609 300 91 0 0 chr2 174077977 174078021 -79178562 + (CA)n Simple_repeat Simple_repeat 2 45 0 2146 253 77 49 chr2 174078021 174078063 -79178520 - L1ME3 LINE L1 -1553 4609 4570 2316 88 0 3 chr2 174078063 174078358 -79178225 - AluY SINE Alu -17 294 1 295 215 75 28 chr2 174078539 174078646 -79177937 + MER103 DNA DNA 55 166 0 309 164 19 106 chr2 174078909 174079013 -79177570 - LTR41 LTR ERVL -6 767 673 494 239 65 43 chr2 174079544 174079728 -79176855 - LTR41 LTR ERVL -585 188 1 576 223 11 0 chr2 174079897 174080050 -79176533 - L1MD2 LINE L1 -13 7807 6200 1062 242 26 7 chr2 174080058 174080327 -79176256 - L1MD2 LINE L1 -226 6133 5860 3731 268 96 66 chr2 174080333 174081190 -79175393 - L1MDa LINE L1 -3922 2618 1788 258 108 0 0 chr2 174081190 174081227 -79175356 - LTR41 LTR ERVL -736 37 1 3731 268 96 66 chr2 174081227 174082857 -79173726 - L1MDa LINE L1 -4752 1788 19 509 263 25 72 chr2 174083574 174083810 -79172773 - MER112 DNA MER1_type -35 225 1 192 40 0 0 chr2 174084000 174084025 -79172558 + (TG)n Simple_repeat Simple_repeat 2 26 0 568 284 120 27 chr2 174084160 174084385 -79172198 + MIR SINE MIR 15 260 -2 195 100 0 0 chr2 174087765 174087795 -79168788 + (CATATA)n Simple_repeat Simple_repeat 4 33 0 227 197 29 22 chr2 174087795 174087932 -79168651 + (TATATG)n Simple_repeat Simple_repeat 5 142 0 1522 157 19 77 chr2 174088276 174088589 -79167994 + AluSx SINE Alu 1 295 -17 7302 49 0 0 chr2 174088962 174090632 -79165951 - L1PA5 LINE L1 -3 6151 4480 30889 73 3 13 chr2 174090633 174092945 -79163638 - L1PA5 LINE L1 -1989 4157 1903 2403 77 3 0 chr2 174092945 174093255 -79163328 + AluY SINE Alu 1 311 0 30889 73 3 13 chr2 174093255 174095139 -79161444 - L1PA5 LINE L1 -4243 1903 2 23 68 0 0 chr2 174096801 174096845 -79159738 + AT_rich Low_complexity Low_complexity 1 44 0 237 293 60 72 chr2 174097098 174097265 -79159318 + MLT1K LTR MaLR 92 256 -332 624 271 41 66 chr2 174098192 174098436 -79158147 - MIR SINE MIR 0 262 25 23 68 0 0 chr2 174099017 174099061 -79157522 + AT_rich Low_complexity Low_complexity 1 44 0 1653 98 53 0 chr2 174099211 174099387 -79157196 - AluSp SINE Alu -5 308 116 183 42 0 0 chr2 174099387 174099411 -79157172 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1653 98 53 0 chr2 174099411 174099459 -79157124 - AluSp SINE Alu -197 116 72 957 218 95 41 chr2 174100226 174100593 -79155990 - LTR37A LTR ERV1 -19 407 21 3825 169 73 8 chr2 174101173 174101944 -79154639 + L1MC1 LINE L1 5513 6333 0 331 244 44 11 chr2 174102075 174102165 -79154418 - MIR SINE MIR -76 186 94 591 248 41 28 chr2 174102298 174102516 -79154067 - LTR37B LTR ERV1 -39 429 209 562 324 16 16 chr2 174102889 174103071 -79153512 + MIR SINE MIR 6 187 -75 1185 108 42 100 chr2 174104871 174105131 -79151452 - MSTA LTR MaLR -4 424 180 331 183 0 0 chr2 174105136 174105196 -79151387 + AluSg/x SINE Alu 211 270 -32 542 250 42 9 chr2 174105585 174105750 -79150833 + MIR SINE MIR 34 198 -62 236 296 45 0 chr2 174105778 174105866 -79150717 - MLT1J LTR MaLR -2 547 456 1717 121 10 2 chr2 174106889 174107182 -79149401 + THE1B LTR MaLR 1 363 -1 213 39 0 0 chr2 174107484 174107510 -79149073 + (TTCC)n Simple_repeat Simple_repeat 4 29 0 814 174 71 0 chr2 174107783 174107979 -79148604 - Tigger6a DNA MER2_type -22 1061 852 1256 84 22 11 chr2 174108079 174108258 -79148325 + L1PA10 LINE L1 5977 6157 -11 1653 236 19 27 chr2 174108298 174108785 -79147798 + L1MB7 LINE L1 5696 6178 -6 3610 203 16 45 chr2 174108785 174109626 -79146957 - Tigger6a DNA MER2_type -267 816 1 387 241 137 80 chr2 174109742 174110078 -79146505 - MLT1J LTR MaLR -50 461 107 24 67 0 0 chr2 174110536 174110581 -79146002 + AT_rich Low_complexity Low_complexity 1 45 0 447 293 89 44 chr2 174111662 174111887 -79144696 + MIR SINE MIR 28 262 0 260 283 0 50 chr2 174112049 174112148 -79144435 - MIR3 SINE MIR -2 206 113 1438 117 48 0 chr2 174116095 174116326 -79140257 + L1MA5A LINE L1 6051 6292 -5 30 45 0 0 chr2 174116326 174116370 -79140213 + AT_rich Low_complexity Low_complexity 1 44 0 357 109 0 0 chr2 174116472 174116527 -79140056 + (TTCA)n Simple_repeat Simple_repeat 2 56 0 587 340 100 38 chr2 174116597 174117266 -79139317 - L2 LINE L2 -144 3169 2450 417 327 75 47 chr2 174118077 174118395 -79138188 - MLT1I LTR MaLR -71 338 12 1606 199 3 10 chr2 174118753 174119064 -79137519 - AluJo SINE Alu -3 309 1 21 36 0 0 chr2 174119134 174119162 -79137421 + AT_rich Low_complexity Low_complexity 1 28 0 320 340 58 6 chr2 174120023 174120179 -79136404 + L3 LINE CR1 1360 1523 -54 266 286 39 0 chr2 174120482 174120559 -79136024 - MIR3 SINE MIR -4 204 125 22 0 0 0 chr2 174122746 174122768 -79133815 + AT_rich Low_complexity Low_complexity 1 22 0 430 235 61 23 chr2 174122768 174122900 -79133683 + L2 LINE L2 3176 3312 -1 1203 192 75 36 chr2 174123534 174123894 -79132689 + MLT1A2 LTR MaLR 1 374 0 369 245 35 63 chr2 174125002 174125145 -79131438 - MIR SINE MIR -100 162 24 353 238 9 38 chr2 174125164 174125269 -79131314 + MER5A DNA MER1_type 5 106 -83 1789 277 53 41 chr2 174125527 174127025 -79129558 + L1ME LINE L1 7 2730 -3350 235 65 0 0 chr2 174127025 174127081 -79129502 + AluSc SINE Alu 247 302 0 257 320 78 0 chr2 174127102 174127205 -79129378 + L1ME2 LINE L1 5988 6098 -66 1844 26 0 26 chr2 174127214 174127444 -79129139 + AluY SINE Alu 1 224 -87 23375 33 2 1 chr2 174127544 174132374 -79124209 + L1PA2 LINE L1 1316 6155 0 1314 196 31 31 chr2 174132848 174133134 -79123449 - AluJo SINE Alu -23 289 4 23 54 0 0 chr2 174133219 174133256 -79123327 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr2 174133324 174133345 -79123238 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 174133415 174133443 -79123140 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 174133660 174133681 -79122902 + AT_rich Low_complexity Low_complexity 1 21 0 439 324 0 27 chr2 174134100 174134285 -79122298 - L2 LINE L2 -2876 438 259 2135 93 14 7 chr2 174134421 174134711 -79121872 - AluSp SINE Alu 0 313 22 247 390 50 66 chr2 174135374 174135615 -79120968 - L2 LINE L2 -1 3271 3035 738 211 7 154 chr2 174135726 174136006 -79120577 + MER8 DNA MER2_type 1 239 0 388 265 64 73 chr2 174136563 174136782 -79119801 - L2 LINE L2 -937 2377 2161 391 272 43 0 chr2 174136867 174136959 -79119624 - MER91B DNA MER1_type -4 186 91 331 228 16 87 chr2 174136982 174137109 -79119474 - MER91B DNA MER1_type -65 125 8 465 248 55 21 chr2 174137366 174137511 -79119072 - MIR SINE MIR 0 262 113 217 299 137 8 chr2 174137690 174137807 -79118776 + MIR SINE MIR 32 163 -99 247 248 82 78 chr2 174137841 174138047 -79118536 + MLT1H LTR MaLR 41 247 -302 294 87 0 0 chr2 174138102 174138148 -79118435 + (GA)n Simple_repeat Simple_repeat 2 47 0 431 278 95 105 chr2 174138188 174138587 -79117996 + MLT1G3 LTR MaLR 156 553 -2 543 273 147 17 chr2 174138687 174138918 -79117665 - MIR SINE MIR -1 261 1 182 282 0 0 chr2 174139038 174139077 -79117506 + L2 LINE L2 3216 3254 -18 439 301 46 77 chr2 174139573 174139832 -79116751 + L2 LINE L2 3022 3272 0 1229 148 55 169 chr2 174140430 174140795 -79115788 + MLT1B LTR MaLR 1 309 -81 228 35 0 0 chr2 174140795 174140824 -79115759 + (CAAAA)n Simple_repeat Simple_repeat 1 29 0 1229 148 55 169 chr2 174140824 174140897 -79115686 + MLT1B LTR MaLR 309 389 -1 314 314 29 20 chr2 174143158 174143316 -79113267 + MIR3 SINE MIR 7 164 -66 205 388 78 9 chr2 174144659 174144775 -79111808 - L2 LINE L2 0 3272 3149 299 189 72 18 chr2 174144895 174145006 -79111577 + LTR37A LTR ERV1 308 424 -2 501 309 104 29 chr2 174145100 174145446 -79111137 + L2 LINE L2 1723 2094 -1220 807 212 54 114 chr2 174145529 174145789 -79110794 - MSTD LTR MaLR 0 396 162 2002 121 0 7 chr2 174145789 174146125 -79110458 - AluSx SINE Alu 0 336 3 807 212 54 114 chr2 174146125 174146273 -79110310 - MSTD LTR MaLR -234 162 7 2438 256 21 14 chr2 174147469 174148318 -79108265 + L1MD1 LINE L1 2183 3003 -3212 5408 214 30 23 chr2 174148559 174148990 -79107593 + L1PA15 LINE L1 1532 1959 -4838 6069 34 1 1 chr2 174148990 174149719 -79106864 + L1PA3 LINE L1 5427 6155 0 5408 214 30 23 chr2 174149719 174151209 -79105374 + L1PA15 LINE L1 1959 3474 -3323 1918 156 0 10 chr2 174151209 174151497 -79105086 + AluSx SINE Alu 1 285 -27 286 181 9 9 chr2 174151522 174151638 -79104945 + (TA)n Simple_repeat Simple_repeat 1 116 0 11348 204 42 38 chr2 174151667 174154582 -79102001 + L1PA15 LINE L1 3475 6375 -441 2079 114 0 7 chr2 174154582 174154863 -79101720 + AluSx SINE Alu 1 279 -33 252 0 0 0 chr2 174154864 174154892 -79101691 + (GGAGAA)n Simple_repeat Simple_repeat 4 31 0 11348 204 42 38 chr2 174154892 174155298 -79101285 + L1PA15 LINE L1 6374 6809 -7 1106 273 52 21 chr2 174155593 174156175 -79100408 + L1MD1 LINE L1 2987 3586 -2629 4407 221 40 58 chr2 174156178 174159079 -79097504 + L1MD1 LINE L1 3463 6311 0 21 36 0 0 chr2 174159650 174159678 -79096905 + AT_rich Low_complexity Low_complexity 1 28 0 1045 204 0 0 chr2 174160998 174161189 -79095394 - AluJb SINE Alu -3 309 119 189 244 0 0 chr2 174162230 174162275 -79094308 + L2 LINE L2 3269 3313 0 2433 108 25 0 chr2 174162478 174162839 -79093744 + L1PB1 LINE L1 5781 6150 -1 359 245 42 68 chr2 174162841 174163033 -79093550 - L1MC4a LINE L1 -1849 5959 5773 37 76 0 0 chr2 174163928 174164007 -79092576 + AT_rich Low_complexity Low_complexity 1 79 0 29833 121 14 54 chr2 174164199 174166768 -79089815 + L1PA7 LINE L1 9 2678 -3476 180 77 0 0 chr2 174166768 174166794 -79089789 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 29833 121 14 54 chr2 174166794 174168088 -79088495 + L1PA7 LINE L1 2678 4022 -2132 1667 89 0 0 chr2 174168088 174168302 -79088281 + AluY SINE Alu 98 311 0 29833 121 14 54 chr2 174168302 174170842 -79085741 + L1PA7 LINE L1 4022 6152 -2 24 106 0 0 chr2 174170867 174170961 -79085622 + AT_rich Low_complexity Low_complexity 1 94 0 234 306 89 42 chr2 174172528 174172933 -79083650 + L1MEd LINE L1 880 1303 -4902 267 317 16 44 chr2 174173170 174173191 -79083392 + L1MEd LINE L1 1600 1620 -4776 2282 181 50 5 chr2 174173191 174173628 -79082955 + MSTB2 LTR MaLR 1 457 0 267 317 16 44 chr2 174173628 174173789 -79082794 + L1MEd LINE L1 1620 1777 -4619 506 345 13 8 chr2 174173984 174174217 -79082366 + Charlie1a DNA MER1_type 1 234 -1221 770 256 18 31 chr2 174174217 174174444 -79082139 - MER58A DNA MER1_type 0 224 1 1320 201 7 28 chr2 174174578 174174861 -79081722 + Charlie1a DNA MER1_type 269 545 -910 245 286 116 34 chr2 174174862 174175009 -79081574 + MLT1L LTR MaLR 220 378 -237 552 342 119 20 chr2 174175138 174175799 -79080784 - L2 LINE L2 -1 3271 2550 184 280 93 13 chr2 174175815 174175890 -79080693 - L2 LINE L2 -215 3057 2977 16906 46 2 20 chr2 174176195 174179202 -79077381 + L1P LINE L1 2 3082 -3064 7458 116 12 6 chr2 174179303 174180509 -79076074 + L1P LINE L1 2627 3839 -2307 5860 110 29 19 chr2 174180525 174181347 -79075236 + L1MA2 LINE L1 5361 6195 -109 6696 115 29 14 chr2 174181347 174182399 -79074184 + MER11C LTR ERVK 1 1067 -4 5860 110 29 19 chr2 174182399 174182511 -79074072 + L1MA2 LINE L1 6195 6304 0 3077 281 81 23 chr2 174182526 174183241 -79073342 + L1MEd LINE L1 2357 3029 -3186 2238 103 3 7 chr2 174183241 174183551 -79073032 + AluSx SINE Alu 4 312 0 3077 281 81 23 chr2 174183551 174184766 -79071817 + L1MEd LINE L1 3029 4459 -1756 7300 227 108 56 chr2 174184778 174185558 -79071025 + L1ME2 LINE L1 19 757 -5687 2203 68 0 0 chr2 174185558 174185836 -79070747 + AluY SINE Alu 34 311 0 7300 227 108 56 chr2 174185836 174185986 -79070597 + L1ME2 LINE L1 757 898 -5546 203 61 30 0 chr2 174185986 174186019 -79070564 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 7300 227 108 56 chr2 174186019 174187581 -79069002 + L1ME2 LINE L1 898 2378 -4066 1981 149 136 0 chr2 174187581 174187956 -79068627 + MSTB LTR MaLR 1 426 0 7300 227 108 56 chr2 174187956 174189968 -79066615 + L1ME2 LINE L1 2378 4285 -2159 2426 54 0 19 chr2 174189968 174190283 -79066300 - AluY SINE Alu -2 309 1 7300 227 108 56 chr2 174190283 174191739 -79064844 + L1ME2 LINE L1 4285 6435 -9 2171 102 73 14 chr2 174191790 174192134 -79064449 + THE1B LTR MaLR 1 364 0 11172 105 6 0 chr2 174192134 174193704 -79062879 + THE1B-int LTR MaLR 1 1580 0 1929 137 82 23 chr2 174193704 174194046 -79062537 + THE1B LTR MaLR 1 362 -2 234 235 195 20 chr2 174194101 174194250 -79062333 + L1ME4a LINE L1 5947 6121 0 239 284 60 35 chr2 174194453 174194569 -79062014 - HAL1b LINE L1 -891 457 339 350 346 25 63 chr2 174194655 174194892 -79061691 - MIR SINE MIR -30 232 5 29 60 0 0 chr2 174194915 174194965 -79061618 + AT_rich Low_complexity Low_complexity 1 50 0 181 325 39 0 chr2 174194967 174195044 -79061539 + MIR SINE MIR 127 206 -56 545 251 12 109 chr2 174195312 174195559 -79061024 + LTR41 LTR ERVL 473 695 -78 240 178 22 0 chr2 174195668 174195713 -79060870 + L2 LINE L2 2601 2646 -668 189 0 0 0 chr2 174195730 174195751 -79060832 + (TTTTA)n Simple_repeat Simple_repeat 5 25 0 6823 213 28 11 chr2 174195873 174196885 -79059698 + L1 LINE L1 3084 4135 -2011 468 58 0 116 chr2 174196885 174196920 -79059663 + MADE1 DNA Mariner 5 42 -38 2341 64 0 7 chr2 174196920 174197218 -79059365 - AluY SINE Alu -15 296 1 468 58 0 116 chr2 174197218 174197268 -79059315 + MADE1 DNA Mariner 42 80 0 6823 213 28 11 chr2 174197268 174197902 -79058681 + L1 LINE L1 4135 4757 -1389 778 301 82 26 chr2 174197902 174198413 -79058170 + L2 LINE L2 2668 3311 -2 1427 181 36 4 chr2 174198621 174198742 -79057841 + AluSx SINE Alu 2 118 -194 213 65 0 0 chr2 174198742 174198773 -79057810 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1427 181 36 4 chr2 174198773 174198927 -79057656 + AluSx SINE Alu 118 286 -26 1677 113 0 110 chr2 174199797 174200107 -79056476 + AluSq SINE Alu 1 276 -37 216 0 0 0 chr2 174200567 174200591 -79055992 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 225 255 0 0 chr2 174200607 174200654 -79055929 - L2 LINE L2 -32 3281 3235 214 351 95 27 chr2 174200700 174200848 -79055735 - MIR3 SINE MIR -9 199 42 1415 186 65 0 chr2 174200848 174201111 -79055472 + AluJb SINE Alu 1 280 -32 387 89 0 0 chr2 174201112 174201168 -79055415 + (CA)n Simple_repeat Simple_repeat 1 56 0 251 343 105 29 chr2 174201478 174201717 -79054866 - MIR SINE MIR 0 262 6 21 36 0 0 chr2 174202705 174202733 -79053850 + AT_rich Low_complexity Low_complexity 1 28 0 28 0 0 0 chr2 174203665 174203693 -79052890 + AT_rich Low_complexity Low_complexity 1 28 0 311 315 99 11 chr2 174204711 174204892 -79051691 + MIR SINE MIR 64 260 -2 916 257 41 24 chr2 174206444 174206736 -79049847 - MER2 DNA MER2_type -5 340 44 1474 104 50 5 chr2 174206820 174207040 -79049543 + MER30 DNA MER1_type 1 230 0 571 289 29 10 chr2 174207048 174207256 -79049327 + MER58C DNA MER1_type 1 212 -3 245 319 29 0 chr2 174207358 174207496 -79049087 + L1MCc LINE L1 1367 1508 -4915 195 69 0 0 chr2 174207501 174207530 -79049053 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 284 279 19 82 chr2 174207767 174207925 -79048658 + L1MCc LINE L1 1085 1232 -5890 867 173 13 6 chr2 174207974 174208130 -79048453 + Tigger1 DNA MER2_type 1 157 -2261 * 879 174 112 0 chr2 174208118 174208314 -79048269 + Tigger1 DNA MER2_type 2201 2418 0 967 276 72 20 chr2 174208348 174208887 -79047696 + L1MCc LINE L1 1696 2262 -4860 2714 193 16 23 chr2 174208889 174209449 -79047134 - L1MA10 LINE L1 -274 5894 5339 1581 165 125 21 chr2 174209449 174209692 -79046891 + L1MA10 LINE L1 5913 6210 -124 195 42 0 0 chr2 174209692 174209716 -79046867 + (CA)n Simple_repeat Simple_repeat 2 25 0 1581 165 125 21 chr2 174209716 174209848 -79046735 + L1MA10 LINE L1 6210 6327 -7 594 283 109 25 chr2 174209837 174210159 -79046424 + L1MCc LINE L1 2235 2583 -4539 * 4543 188 15 24 chr2 174210172 174211279 -79045304 + L1MB2 LINE L1 5073 6169 -2 620 255 103 26 chr2 174211284 174211555 -79045028 + L1MCc LINE L1 2574 2865 -4257 583 146 109 0 chr2 174211549 174211686 -79044897 + L1MA9 LINE L1 6161 6312 0 * 4370 236 75 112 chr2 174211858 174213437 -79043146 + L1MCc LINE L1 2957 4593 -2348 603 208 22 67 chr2 174213437 174213615 -79042968 + MER63A DNA MER1_type 2 171 -39 4370 236 75 112 chr2 174213615 174213808 -79042775 + L1MCc LINE L1 4593 4792 -2149 1662 236 35 15 chr2 174213808 174214266 -79042317 - MLT1C LTR MaLR 0 467 1 4370 236 75 112 chr2 174214266 174215348 -79041235 + L1MCc LINE L1 4792 5877 -1064 301 271 54 55 chr2 174215597 174215779 -79040804 - MLT1H1 LTR MaLR -13 582 351 396 0 0 0 chr2 174216279 174216323 -79040260 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 1833 109 31 59 chr2 174216362 174216683 -79039900 + AluSx SINE Alu 1 312 0 385 271 139 22 chr2 174217077 174217383 -79039200 + MLT1H1 LTR MaLR 224 555 0 1410 156 20 80 chr2 174217393 174217770 -79038813 + AluJb SINE Alu 1 359 0 225 108 0 0 chr2 174218614 174218651 -79037932 + (ATG)n Simple_repeat Simple_repeat 1 37 0 259 244 156 25 chr2 174218653 174218813 -79037770 - MIR SINE MIR 0 262 82 268 338 0 0 chr2 174219095 174219175 -79037408 - MIR SINE MIR -112 150 71 732 171 33 39 chr2 174220700 174220870 -79035713 + MLT1H LTR MaLR 387 595 0 2144 127 0 0 chr2 174221064 174221372 -79035211 - AluSx SINE Alu -4 308 1 21 36 0 0 chr2 174224033 174224061 -79032522 + AT_rich Low_complexity Low_complexity 1 28 0 487 175 0 0 chr2 174227648 174227728 -79028855 + MLT1A1 LTR MaLR 1 80 -285 317 302 123 45 chr2 174228243 174228773 -79027810 - L1M4 LINE L1 -1542 4604 4034 2922 175 6 4 chr2 174228827 174229354 -79027229 - L1PA15 LINE L1 0 6816 6289 514 208 0 0 chr2 174229359 174229465 -79027118 + L1P LINE L1 3942 4047 -2099 1032 209 51 0 chr2 174229494 174229748 -79026835 + L1P LINE L1 4231 4497 -1649 594 175 0 0 chr2 174229766 174229880 -79026703 + L1P LINE L1 3934 4047 -2099 13741 219 36 36 chr2 174229895 174234587 -79021996 - L1PA15 LINE L1 -528 6288 1650 1886 284 66 50 chr2 174234595 174235602 -79020981 - L1PA15 LINE L1 -5251 1536 1 377 326 64 50 chr2 174235717 174235999 -79020584 - L1ME LINE L1 -345 5817 5532 216 122 0 0 chr2 174236169 174236210 -79020373 + (TG)n Simple_repeat Simple_repeat 2 42 0 258 250 0 110 chr2 174236369 174236469 -79020114 + L2 LINE L2 3184 3272 0 28 48 0 0 chr2 174237100 174237142 -79019441 + AT_rich Low_complexity Low_complexity 1 42 0 21 57 0 0 chr2 174237331 174237366 -79019217 + AT_rich Low_complexity Low_complexity 1 35 0 26 30 0 0 chr2 174237848 174237881 -79018702 + AT_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr2 174238055 174238077 -79018506 + AT_rich Low_complexity Low_complexity 1 22 0 360 0 0 0 chr2 174238218 174238258 -79018325 + (CA)n Simple_repeat Simple_repeat 2 41 0 5716 156 40 24 chr2 174238446 174238692 -79017891 - L1 LINE L1 -3384 4181 3941 2683 84 3 6 chr2 174238692 174239048 -79017535 - THE1A LTR MaLR 0 355 1 10942 106 18 2 chr2 174239048 174240603 -79015980 - THE1A-int LTR MaLR 0 1580 1 2618 93 3 3 chr2 174240603 174240958 -79015625 - THE1A LTR MaLR 0 355 1 5716 156 40 24 chr2 174240958 174242127 -79014456 - L1 LINE L1 -3624 3941 2725 225 65 0 0 chr2 174242127 174242158 -79014425 + (TTTTG)n Simple_repeat Simple_repeat 4 34 0 5716 156 40 24 chr2 174242158 174242327 -79014256 - L1 LINE L1 -4840 2725 2560 8134 94 12 0 chr2 174242334 174244261 -79012322 - L1PA7 LINE L1 -10 6144 4198 15301 114 13 6 chr2 174244261 174246622 -79009961 + L1PA7 LINE L1 1830 4206 -1940 4876 152 20 1 chr2 174246619 174247455 -79009128 - L1 LINE L1 -4993 2572 1721 * 239 326 11 0 chr2 174247533 174247628 -79008955 + MIR SINE MIR 164 259 -3 22 0 0 0 chr2 174247642 174247664 -79008919 + AT_rich Low_complexity Low_complexity 1 22 0 329 274 126 42 chr2 174247708 174247971 -79008612 - L1ME LINE L1 -482 5639 5355 36217 38 1 11 chr2 174247992 174253324 -79003259 + L1PA3 LINE L1 873 6152 -3 1489 165 92 0 chr2 174253941 174254201 -79002382 - AluJb SINE Alu -20 292 9 217 227 0 0 chr2 174254692 174254736 -79001847 - MER5B DNA MER1_type -131 47 4 250 331 29 43 chr2 174256737 174256876 -78999707 - L2 LINE L2 -2 3270 3134 474 286 136 29 chr2 174257149 174257429 -78999154 + LTR16B LTR ERVL 155 464 0 689 359 37 17 chr2 174257485 174258020 -78998563 + HERV16 LTR ERVL 122 667 -4329 300 269 51 39 chr2 174258269 174258425 -78998158 + HERV16 LTR ERVL 4506 4663 -333 352 271 47 47 chr2 174258473 174258709 -78997874 + HERV16 LTR ERVL 4761 4996 0 1027 285 50 48 chr2 174258709 174259172 -78997411 + LTR16B LTR ERVL 1 464 0 192 279 0 0 chr2 174259392 174259435 -78997148 - L2 LINE L2 -601 2713 2671 215 222 0 14 chr2 174259573 174259645 -78996938 + GA-rich Low_complexity Low_complexity 2 72 0 1603 56 0 0 chr2 174259855 174260052 -78996531 + L1PA3 LINE L1 5956 6152 -3 24 0 0 0 chr2 174260052 174260076 -78996507 + AT_rich Low_complexity Low_complexity 1 24 0 23 78 0 0 chr2 174260101 174260152 -78996431 + AT_rich Low_complexity Low_complexity 1 51 0 21 36 0 0 chr2 174260279 174260307 -78996276 + AT_rich Low_complexity Low_complexity 1 28 0 246 347 135 1 chr2 174260722 174261003 -78995580 + L3 LINE CR1 1080 1415 -162 928 221 73 31 chr2 174261021 174261378 -78995205 - MER69 DNA AcHobo 0 2526 2155 324 0 0 0 chr2 174261378 174261414 -78995169 + (TG)n Simple_repeat Simple_repeat 1 36 0 225 0 0 0 chr2 174261413 174261438 -78995145 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 236 289 9 26 chr2 174261515 174261629 -78994954 - L1MC3 LINE L1 -74 7711 7600 253 332 42 42 chr2 174262960 174263150 -78993433 - L2 LINE L2 0 3313 3124 232 303 26 45 chr2 174263410 174263565 -78993018 - L3b LINE CR1 -241 1342 1191 339 258 91 23 chr2 174263631 174263763 -78992820 + MIR3 SINE MIR 60 200 -8 323 292 151 32 chr2 174264740 174264925 -78991658 + MIR SINE MIR 43 249 -13 21 36 0 0 chr2 174265174 174265202 -78991381 + AT_rich Low_complexity Low_complexity 1 28 0 771 199 0 0 chr2 174268085 174268216 -78988367 - FAM SINE Alu -53 132 2 551 227 117 79 chr2 174268464 174268856 -78987727 + L1MC5 LINE L1 7165 7571 -390 21 36 0 0 chr2 174269183 174269211 -78987372 + AT_rich Low_complexity Low_complexity 1 28 0 1445 185 92 59 chr2 174270178 174270458 -78986125 - MER93b LTR ERV1 0 373 77 2273 105 0 0 chr2 174270458 174270762 -78985821 - AluY SINE Alu -7 304 1 1445 185 92 59 chr2 174270762 174270838 -78985745 - MER93b LTR ERV1 -296 77 5 391 182 13 0 chr2 174270851 174270928 -78985655 - L1PA10 LINE L1 -11 6157 6080 449 25 0 0 chr2 174270928 174270985 -78985598 + L1P4 LINE L1 5689 5745 -423 2200 109 0 7 chr2 174271190 174271493 -78985090 - AluSc SINE Alu -8 301 1 2031 147 13 0 chr2 174272463 174272769 -78983814 - AluSx SINE Alu -2 310 1 343 283 43 43 chr2 174272912 174273050 -78983533 - L2 LINE L2 0 3313 3176 1772 98 0 0 chr2 174273938 174274172 -78982411 + AluSc SINE Alu 1 234 -75 618 246 26 10 chr2 174274225 174274420 -78982163 - L1MD3 LINE L1 -11 7984 7787 22 0 0 0 chr2 174274605 174274627 -78981956 + AT_rich Low_complexity Low_complexity 1 22 0 42922 31 21 2 chr2 174274627 174280663 -78975920 - L1HS LINE L1 0 6155 4 1230 240 16 9 chr2 174280669 174280986 -78975597 - L1MD3 LINE L1 -202 7793 7475 1010 251 163 28 chr2 174280984 174281487 -78975096 - L1MC4a LINE L1 -556 7252 6682 * 23 54 0 0 chr2 174281603 174281640 -78974943 + AT_rich Low_complexity Low_complexity 1 37 0 323 366 56 19 chr2 174283312 174283528 -78973055 + L1MEc LINE L1 762 985 -6137 636 240 41 28 chr2 174283744 174284072 -78972511 + L1MEc LINE L1 1374 1873 -4973 315 288 19 120 chr2 174284080 174284396 -78972187 + L1ME LINE L1 150 433 -5772 847 269 74 50 chr2 174284408 174285316 -78971267 + L1ME LINE L1 841 1764 -4451 1350 203 83 83 chr2 174285356 174285523 -78971060 + MLT1C LTR MaLR 9 175 -292 1808 129 75 0 chr2 174285523 174285801 -78970782 + AluSx SINE Alu 3 301 -11 1350 203 83 83 chr2 174285801 174286092 -78970491 + MLT1C LTR MaLR 174 467 0 516 293 49 15 chr2 174286213 174286476 -78970107 + L1ME LINE L1 1986 2257 -4139 2244 104 0 3 chr2 174286506 174286803 -78969780 + AluSq SINE Alu 3 298 -15 250 231 0 0 chr2 174288294 174288346 -78968237 + (TGAA)n Simple_repeat Simple_repeat 2 53 0 13736 31 0 0 chr2 174289299 174290962 -78965621 - L1P LINE L1 -1436 4710 3048 7631 25 1 0 chr2 174290962 174292206 -78964377 + L1PA3 LINE L1 4908 6152 -3 21 0 0 0 chr2 174292206 174292227 -78964356 + AT_rich Low_complexity Low_complexity 1 21 0 320 369 21 14 chr2 174292256 174292397 -78964186 - MIR SINE MIR -119 143 2 1028 276 99 21 chr2 174293036 174293516 -78963067 - MER34 LTR ERV1 -20 565 2 194 288 0 68 chr2 174293835 174293894 -78962689 + L2 LINE L2 3166 3220 -93 392 135 11 45 chr2 174294148 174294237 -78962346 - L1PB4 LINE L1 0 6156 6071 24 0 0 0 chr2 174294856 174294880 -78961703 + AT_rich Low_complexity Low_complexity 1 24 0 315 276 11 9 chr2 174295069 174295214 -78961369 - L1ME LINE L1 -331 5773 5628 568 200 9 0 chr2 174295503 174295613 -78960970 - L1PA16 LINE L1 -18 6148 6038 686 320 89 31 chr2 174295613 174296163 -78960420 - L1ME LINE L1 -753 5376 4795 472 286 8 8 chr2 174296219 174296352 -78960231 - L1ME LINE L1 -5394 725 593 327 364 57 60 chr2 174296482 174296798 -78959785 - L1ME LINE L1 -5692 427 113 503 131 28 11 chr2 174297086 174297244 -78959339 + CT-rich Low_complexity Low_complexity 1 155 -295 1959 120 0 0 chr2 174297244 174297511 -78959072 - AluSx SINE Alu -45 267 1 503 131 28 11 chr2 174297511 174297529 -78959054 + CT-rich Low_complexity Low_complexity 155 450 0 2856 218 17 15 chr2 174297762 174298355 -78958228 - MER77 LTR ERV1 -11 594 1 269 331 24 5 chr2 174298475 174298692 -78957891 - L1MEc LINE L1 -861 1715 1572 551 276 95 77 chr2 174298900 174299080 -78957503 - L1MEc LINE L1 -4914 1291 1116 2207 135 0 3 chr2 174299080 174299391 -78957192 - AluSx SINE Alu 0 312 3 551 276 95 77 chr2 174299391 174299873 -78956710 - L1MEc LINE L1 -5089 1116 617 404 296 39 90 chr2 174299933 174300244 -78956339 - HAL1 LINE L1 -962 1545 1251 25 0 0 0 chr2 174300483 174300508 -78956075 + AT_rich Low_complexity Low_complexity 1 25 0 28 29 0 0 chr2 174301537 174301572 -78955011 + AT_rich Low_complexity Low_complexity 1 35 0 499 383 51 10 chr2 174302177 174302488 -78954095 + L2 LINE L2 2949 3272 0 246 239 0 0 chr2 174302617 174302688 -78953895 + CT-rich Low_complexity Low_complexity 4 74 0 2170 115 3 13 chr2 174303030 174303343 -78953240 - AluSg SINE Alu 0 310 1 1678 155 7 4 chr2 174303726 174304003 -78952580 - AluJo SINE Alu -6 306 29 701 268 48 64 chr2 174304010 174304324 -78952259 + L2 LINE L2 3004 3312 -1 794 196 0 35 chr2 174305701 174305874 -78950709 - MER3 DNA MER1_type -82 127 8 309 151 0 0 chr2 174306486 174306539 -78950044 + (TA)n Simple_repeat Simple_repeat 1 53 0 2101 114 0 3 chr2 174306539 174306828 -78949755 - AluSx SINE Alu -24 288 1 582 257 162 0 chr2 174308525 174308673 -78947910 - MER5A DNA MER1_type -6 183 12 29 60 0 0 chr2 174309325 174309375 -78947208 + AT_rich Low_complexity Low_complexity 1 50 0 1990 176 161 8 chr2 174310561 174311038 -78945545 + MER44D DNA MER2_type 1 605 0 198 203 25 13 chr2 174311219 174311298 -78945285 + (TA)n Simple_repeat Simple_repeat 1 80 0 386 240 11 11 chr2 174311309 174311488 -78945095 + (TA)n Simple_repeat Simple_repeat 2 180 0 341 319 0 0 chr2 174312474 174312565 -78944018 + MIR SINE MIR 42 132 -76 26 0 0 0 chr2 174312626 174312652 -78943931 + AT_rich Low_complexity Low_complexity 1 26 0 565 340 164 53 chr2 174312856 174313062 -78943521 - L2 LINE L2 -341 2973 2791 342 0 0 0 chr2 174313062 174313100 -78943483 + (TG)n Simple_repeat Simple_repeat 2 39 0 565 340 164 53 chr2 174313100 174313162 -78943421 - L2 LINE L2 -523 2791 2737 889 247 5 27 chr2 174313162 174313385 -78943198 - MER20 DNA MER1_type 0 219 2 565 340 164 53 chr2 174313385 174314468 -78942115 - L2 LINE L2 -577 2737 1471 4940 96 63 7 chr2 174314592 174315365 -78941218 - L1P3 LINE L1 -2946 3515 2699 * 7577 91 124 2 chr2 174315345 174316492 -78940091 - L1P3 LINE L1 -5174 1287 1 745 328 46 28 chr2 174316496 174316956 -78939627 - L1MCc LINE L1 -4978 1445 978 631 284 64 64 chr2 174317013 174317453 -78939130 - L1MCc LINE L1 -5970 453 14 379 221 62 41 chr2 174317472 174317617 -78938966 - L1ME4a LINE L1 -260 5861 5714 24 32 0 0 chr2 174317678 174317709 -78938874 + AT_rich Low_complexity Low_complexity 1 31 0 458 251 9 7 chr2 174317868 174317997 -78938586 + L1MC/D LINE L1 5667 5796 -368 221 309 73 0 chr2 174318865 174318933 -78937650 + L2 LINE L2 3227 3299 -14 2297 100 0 3 chr2 174319336 174319647 -78936936 - AluSg SINE Alu 0 310 1 1513 189 7 27 chr2 174319670 174319971 -78936612 - AluJb SINE Alu -14 298 4 21 0 0 0 chr2 174320291 174320312 -78936271 + AT_rich Low_complexity Low_complexity 1 21 0 33 43 0 0 chr2 174321528 174321575 -78935008 + AT_rich Low_complexity Low_complexity 1 47 0 512 302 39 0 chr2 174322620 174322806 -78933777 + MIR SINE MIR 37 230 -32 220 254 45 73 chr2 174323142 174323252 -78933331 + L3 LINE CR1 579 685 -892 407 308 9 9 chr2 174323496 174323751 -78932832 - L1ME LINE L1 -5115 1294 1040 23 0 0 0 chr2 174323951 174323974 -78932609 + AT_rich Low_complexity Low_complexity 1 23 0 238 257 29 0 chr2 174324970 174325040 -78931543 + (TCTA)n Simple_repeat Simple_repeat 2 73 0 389 232 56 49 chr2 174325843 174325985 -78930598 - MIR SINE MIR -56 206 64 826 210 72 5 chr2 174326010 174326205 -78930378 + MER3 DNA MER1_type 1 208 -1 180 158 0 0 chr2 174329254 174329292 -78927291 + CT-rich Low_complexity Low_complexity 1 38 0 2275 241 56 50 chr2 174329776 174330528 -78926055 - MER21B LTR ERV1 -107 756 1 1758 147 65 10 chr2 174330946 174331265 -78925318 + AluJb SINE Alu 5 339 0 182 359 117 31 chr2 174331277 174331405 -78925178 - MIR3 SINE MIR -32 176 38 183 184 0 0 chr2 174333401 174333439 -78923144 + (TATATG)n Simple_repeat Simple_repeat 2 39 0 2189 121 0 7 chr2 174333618 174333923 -78922660 + AluSx SINE Alu 1 303 -9 2268 114 3 0 chr2 174334097 174334404 -78922179 - AluSx SINE Alu -4 308 1 961 230 38 8 chr2 174334689 174334928 -78921655 + MIR SINE MIR 15 260 -2 387 0 0 0 chr2 174336436 174336479 -78920104 + (TG)n Simple_repeat Simple_repeat 2 44 0 193 356 0 0 chr2 174337413 174337472 -78919111 - L2 LINE L2 -4 3309 3251 22 56 0 0 chr2 174341060 174341096 -78915487 + AT_rich Low_complexity Low_complexity 1 36 0 384 275 168 0 chr2 174341135 174341284 -78915299 + MIR SINE MIR 45 218 -44 2360 213 6 27 chr2 174341947 174342463 -78914120 - MLT1D LTR MaLR 0 505 1 535 283 132 28 chr2 174343234 174343446 -78913137 + MIR SINE MIR 25 258 -4 243 234 45 36 chr2 174343688 174343799 -78912784 - L1 LINE L1 -1131 5015 4904 303 267 78 120 chr2 174343863 174344054 -78912529 + L2 LINE L2 3004 3186 -86 25 65 0 0 chr2 174344139 174344185 -78912398 + AT_rich Low_complexity Low_complexity 1 46 0 326 310 20 82 chr2 174344841 174345086 -78911497 - HAL1b LINE L1 -914 434 205 25 51 0 0 chr2 174346551 174346590 -78909993 + AT_rich Low_complexity Low_complexity 1 39 0 267 356 56 0 chr2 174346816 174346906 -78909677 + MIR SINE MIR 50 144 -64 2390 35 0 7 chr2 174347111 174347394 -78909189 - AluY SINE Alu -30 281 1 22 0 0 0 chr2 174347603 174347625 -78908958 + AT_rich Low_complexity Low_complexity 1 22 0 186 271 34 0 chr2 174348687 174348746 -78907837 + MIR3 SINE MIR 147 207 -1 322 366 59 0 chr2 174349061 174349247 -78907336 + MIR SINE MIR 66 262 0 487 248 112 90 chr2 174349769 174349884 -78906699 + MIR SINE MIR 1 112 -150 2181 98 27 3 chr2 174349884 174350181 -78906402 - AluSc SINE Alu -5 304 1 487 248 112 90 chr2 174350181 174350327 -78906256 + MIR SINE MIR 112 262 0 213 94 0 0 chr2 174350741 174350773 -78905810 + (GA)n Simple_repeat Simple_repeat 1 32 0 234 325 156 7 chr2 174351315 174351469 -78905114 - MIR3 SINE MIR -9 199 23 328 316 93 46 chr2 174351973 174352210 -78904373 - MIR SINE MIR -6 256 9 949 97 8 0 chr2 174352739 174352863 -78903720 + AluSq/x SINE Alu 8 132 -180 518 43 14 0 chr2 174352864 174352933 -78903650 + (GGAA)n Simple_repeat Simple_repeat 4 73 0 544 151 0 28 chr2 174353047 174353153 -78903430 + AluSg/x SINE Alu 198 300 -9 2177 117 0 7 chr2 174353225 174353524 -78903059 - AluSg SINE Alu -13 297 1 6111 17 0 2 chr2 174354601 174355761 -78900822 + L1PA2 LINE L1 4803 5960 -195 258 277 15 0 chr2 174355867 174355932 -78900651 + MIR SINE MIR 107 172 -90 222 324 32 70 chr2 174357811 174357889 -78898694 + MIR SINE MIR 13 92 -170 825 224 53 6 chr2 174357889 174358059 -78898524 + MER45A DNA AcHobo 1 178 0 222 324 32 70 chr2 174358059 174358165 -78898418 + MIR SINE MIR 92 190 -72 425 162 54 0 chr2 174358421 174358495 -78898088 - MER63 DNA MER1_type -317 745 42 957 308 0 0 chr2 174358576 174358826 -78897757 + MIR SINE MIR 7 256 -6 2015 88 48 0 chr2 174359517 174359789 -78896794 + AluSp SINE Alu 1 285 -28 23 68 0 0 chr2 174360203 174360247 -78896336 + AT_rich Low_complexity Low_complexity 1 44 0 719 210 6 6 chr2 174361286 174361448 -78895135 - L1MB7 LINE L1 -12 6172 6011 1013 221 118 76 chr2 174362325 174362647 -78893936 - MSTD LTR MaLR 0 396 54 1717 155 3 44 chr2 174362647 174362943 -78893640 - AluJb SINE Alu -26 286 3 1013 221 118 76 chr2 174362943 174363000 -78893583 - MSTD LTR MaLR -342 54 1 188 313 62 10 chr2 174365357 174365453 -78891130 + MER5B DNA MER1_type 60 160 -18 1690 114 7 73 chr2 174365824 174366113 -78890470 + AluJo SINE Alu 21 290 -22 599 318 58 73 chr2 174370051 174370514 -78886069 + LTR67 LTR ERVL 102 557 0 238 329 68 0 chr2 174370973 174371046 -78885537 + L2 LINE L2 3231 3308 -5 523 258 102 6 chr2 174371096 174371263 -78885320 - MIR SINE MIR -61 201 19 363 346 61 43 chr2 174371624 174371904 -78884679 - L2 LINE L2 -446 2868 2584 24 0 0 0 chr2 174372801 174372825 -78883758 + AT_rich Low_complexity Low_complexity 1 24 0 208 281 31 31 chr2 174372878 174372942 -78883641 + L2 LINE L2 3209 3272 0 459 116 35 12 chr2 174373482 174373568 -78883015 - L1PB4 LINE L1 -1 6155 6068 202 383 67 38 chr2 174373902 174374142 -78882441 - L2 LINE L2 -20 3252 3006 472 195 168 27 chr2 174375775 174375924 -78880659 - Charlie8 DNA MER1_type -2228 189 20 195 262 66 16 chr2 174376318 174376379 -78880204 + L2 LINE L2 3230 3293 -20 252 0 0 0 chr2 174377120 174377148 -78879435 + (CAAT)n Simple_repeat Simple_repeat 3 30 0 1547 200 109 54 chr2 174377515 174377994 -78878589 + MLT1D LTR MaLR 1 505 0 2083 118 0 10 chr2 174378380 174378677 -78877906 + AluSg SINE Alu 1 294 -16 275 158 53 0 chr2 174379674 174379731 -78876852 - L1ME4a LINE L1 -1 6120 6061 812 169 0 0 chr2 174379894 174380018 -78876565 - FLAM_C SINE Alu -19 124 1 244 221 13 26 chr2 174391996 174392073 -78864510 + (TA)n Simple_repeat Simple_repeat 1 76 0 743 208 25 84 chr2 174392799 174393001 -78863582 - MER58A DNA MER1_type 0 224 35 999 333 81 19 chr2 174393241 174393862 -78862721 + L2 LINE L2 1914 2572 -742 488 326 64 33 chr2 174394125 174394641 -78861942 - HAL1b LINE L1 -755 593 62 207 170 0 125 chr2 174394651 174394763 -78861820 + T-rich Low_complexity Low_complexity 2 99 0 207 139 0 0 chr2 174396736 174396772 -78859811 + (GGAA)n Simple_repeat Simple_repeat 2 37 0 1535 209 42 24 chr2 174398834 174399217 -78857366 - MLT1B LTR MaLR 0 390 1 2387 88 41 6 chr2 174399675 174400039 -78856544 - L1MA1 LINE L1 -4 6298 5922 1983 171 32 5 chr2 174400390 174400769 -78855814 - MLT1B LTR MaLR 0 390 2 242 351 53 15 chr2 174402388 174402519 -78854064 + LTR16A LTR ERVL 16 151 -299 807 210 98 29 chr2 174402550 174402755 -78853828 + LTR16A LTR ERVL 227 445 -5 411 295 73 15 chr2 174402762 174403059 -78853524 + HERV16 LTR ERVL 3 359 -4637 207 161 0 0 chr2 174403221 174403252 -78853331 + (TTG)n Simple_repeat Simple_repeat 3 33 0 544 230 174 59 chr2 174403311 174403581 -78853002 - MLT1H LTR MaLR -110 439 139 201 178 0 0 chr2 174404778 174404823 -78851760 + (TG)n Simple_repeat Simple_repeat 2 46 0 422 368 81 16 chr2 174405168 174405551 -78851032 + L2 LINE L2 2151 2558 -756 2251 112 42 22 chr2 174405632 174405988 -78850595 + THE1B LTR MaLR 2 364 0 11320 91 6 31 chr2 174405988 174407609 -78848974 + THE1B-int LTR MaLR 1 1580 0 1801 176 48 20 chr2 174407609 174407961 -78848622 + THE1B LTR MaLR 1 362 -2 360 357 23 8 chr2 174407963 174408092 -78848491 + L2 LINE L2 3142 3272 0 220 286 24 8 chr2 174408423 174408549 -78848034 + (TA)n Simple_repeat Simple_repeat 2 129 0 349 288 8 20 chr2 174408867 174409016 -78847567 - MIR SINE MIR -59 203 57 292 312 0 16 chr2 174409215 174409340 -78847243 + (TATATG)n Simple_repeat Simple_repeat 2 124 0 281 263 59 25 chr2 174409637 174409755 -78846828 - MIR SINE MIR -70 192 71 208 323 23 15 chr2 174409926 174410059 -78846524 + (TA)n Simple_repeat Simple_repeat 2 135 0 281 305 85 0 chr2 174411384 174411502 -78845081 - MIR SINE MIR -71 191 64 1059 256 84 22 chr2 174411855 174412222 -78844361 - MLT1J2 LTR MaLR -25 425 36 2396 51 0 42 chr2 174412279 174412592 -78843991 - AluY SINE Alu -11 300 1 3044 34 18 8 chr2 174463648 174464030 -78792553 - L1PA5 LINE L1 0 6154 5769 360 0 0 0 chr2 174464891 174464931 -78791652 + (CA)n Simple_repeat Simple_repeat 2 41 0 212 343 0 0 chr2 174465190 174465260 -78791323 - MIR SINE MIR -109 153 84 613 286 132 29 chr2 174465889 174466169 -78790414 - MLT1G1 LTR MaLR 0 595 287 423 0 0 0 chr2 174468613 174468660 -78787923 + (TG)n Simple_repeat Simple_repeat 2 48 0 333 242 63 11 chr2 174469939 174470034 -78786549 - L2 LINE L2 -5 3267 3168 1865 102 0 4 chr2 174470235 174470503 -78786080 + AluSg SINE Alu 39 305 0 395 196 125 18 chr2 174470703 174470815 -78785768 + L2 LINE L2 3183 3306 -7 303 287 50 40 chr2 174471177 174471278 -78785305 - MIR3 SINE MIR -24 184 83 576 334 128 25 chr2 174471581 174472237 -78784346 - L2 LINE L2 -3 3310 2577 363 78 0 0 chr2 174472237 174472288 -78784295 + (TG)n Simple_repeat Simple_repeat 1 51 0 576 334 128 25 chr2 174472288 174472304 -78784279 - L2 LINE L2 -736 2577 2564 207 0 0 0 chr2 174472767 174472790 -78783793 + (T)n Simple_repeat Simple_repeat 1 23 0 575 268 73 38 chr2 174473467 174473919 -78782664 + L1MC5 LINE L1 7447 7914 -47 25 0 0 0 chr2 174474095 174474120 -78782463 + AT_rich Low_complexity Low_complexity 1 25 0 740 225 6 19 chr2 174474288 174474448 -78782135 - FRAM SINE Alu -8 158 1 3764 139 6 19 chr2 174474827 174475474 -78781109 + L1MC1 LINE L1 5693 6331 -2 2189 129 0 0 chr2 174476725 174477035 -78779548 - AluSg SINE Alu 0 310 1 12928 178 45 17 chr2 174477039 174477701 -78778882 - L1M1 LINE L1 -725 6280 5638 207 0 0 0 chr2 174477701 174477724 -78778859 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 1992 131 0 0 chr2 174477727 174478009 -78778574 - AluSx SINE Alu -30 282 1 12928 178 45 17 chr2 174478009 174479823 -78776760 - L1M1 LINE L1 -1368 5637 3685 1957 150 10 0 chr2 174479823 174480130 -78776453 - AluSx SINE Alu 0 312 3 12928 178 45 17 chr2 174480130 174480717 -78775866 - L1M1 LINE L1 -3320 3685 3116 9946 196 77 34 chr2 174480691 174481344 -78775239 - L1M1 LINE L1 -4249 2600 1976 * 1678 183 0 11 chr2 174481344 174481628 -78774955 + AluJo SINE Alu 1 281 -31 9946 196 77 34 chr2 174481628 174483287 -78773296 - L1M1 LINE L1 -4873 1976 190 1334 278 27 27 chr2 174484065 174484468 -78772115 + HAL1 LINE L1 4 406 -2101 203 256 0 0 chr2 174484534 174484577 -78772006 - MIR SINE MIR -100 108 66 793 78 0 0 chr2 174486305 174486407 -78770176 - MER57B LTR ERV1 -331 103 2 3635 112 22 4 chr2 174486410 174486964 -78769619 - MER41B LTR ERV1 -71 564 1 195 69 0 0 chr2 174487748 174487777 -78768806 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 317 117 17 0 chr2 174488366 174488426 -78768157 + (CA)n Simple_repeat Simple_repeat 1 61 0 325 299 163 23 chr2 174489570 174489871 -78766712 + L1ME LINE L1 4911 5253 -893 471 310 105 22 chr2 174489884 174490269 -78766314 + L1ME LINE L1 5378 5795 -367 2244 113 3 0 chr2 174490856 174491166 -78765417 + AluSx SINE Alu 1 311 -1 2205 107 0 0 chr2 174491922 174492220 -78764363 - AluSx SINE Alu -14 298 1 354 219 30 3 chr2 174492702 174492783 -78763800 - MER5A DNA MER1_type 0 189 96 3441 122 56 8 chr2 174492806 174493412 -78763171 + L1MA4 LINE L1 5660 6294 -6 661 254 22 0 chr2 174493418 174493556 -78763027 - MER5A DNA MER1_type -48 141 1 22 0 0 0 chr2 174493905 174493927 -78762656 + AT_rich Low_complexity Low_complexity 1 22 0 197 313 0 0 chr2 174494456 174494504 -78762079 + MER5A DNA MER1_type 6 53 -136 2293 75 7 3 chr2 174494911 174495203 -78761380 + AluSc SINE Alu 1 293 -16 40 59 0 0 chr2 174496589 174496657 -78759926 + AT_rich Low_complexity Low_complexity 1 68 0 195 184 0 0 chr2 174496958 174496996 -78759587 + (CATA)n Simple_repeat Simple_repeat 1 38 0 232 225 14 14 chr2 174497199 174497270 -78759313 + (TA)n Simple_repeat Simple_repeat 2 72 0 25 31 0 0 chr2 174497359 174497391 -78759192 + AT_rich Low_complexity Low_complexity 1 32 0 2503 67 0 0 chr2 174499364 174499664 -78756919 + AluSc SINE Alu 1 300 -9 22 0 0 0 chr2 174500306 174500328 -78756255 + AT_rich Low_complexity Low_complexity 1 22 0 2147 86 13 10 chr2 174501265 174501568 -78755015 - AluY SINE Alu -7 304 1 192 40 0 0 chr2 174501714 174501739 -78754844 + (A)n Simple_repeat Simple_repeat 1 25 0 27 29 0 0 chr2 174501855 174501889 -78754694 + AT_rich Low_complexity Low_complexity 1 34 0 27 0 0 0 chr2 174501960 174501987 -78754596 + AT_rich Low_complexity Low_complexity 1 27 0 1192 253 52 44 chr2 174502060 174503521 -78753062 + L1M4 LINE L1 3775 5347 -799 1105 175 6 0 chr2 174503608 174503791 -78752792 - AluSx SINE Alu -126 186 3 17118 189 22 11 chr2 174503794 174508935 -78747648 - L1PA16 LINE L1 -11 6858 1625 1959 114 36 65 chr2 174508935 174509321 -78747262 - THE1C LTR MaLR 0 375 1 17118 189 22 11 chr2 174509321 174510754 -78745829 - L1PA16 LINE L1 -5244 1625 210 198 0 0 0 chr2 174511621 174511643 -78744940 + (A)n Simple_repeat Simple_repeat 1 22 0 303 264 115 6 chr2 174512263 174512445 -78744138 + L1MDb LINE L1 1116 1317 -5092 2019 149 0 0 chr2 174512689 174512984 -78743599 + AluSx SINE Alu 3 297 -15 2268 119 0 7 chr2 174513615 174513925 -78742658 + AluSx SINE Alu 3 310 -2 183 309 48 48 chr2 174516065 174516149 -78740434 - MIR SINE MIR -118 144 61 239 192 0 19 chr2 174516343 174516395 -78740188 - L2 LINE L2 -1 3312 3262 192 220 102 17 chr2 174516983 174517042 -78739541 - L2 LINE L2 -70 3202 3139 27 0 0 0 chr2 174517400 174517427 -78739156 + AT_rich Low_complexity Low_complexity 1 27 0 225 94 0 0 chr2 174518065 174518097 -78738486 + (TG)n Simple_repeat Simple_repeat 2 33 0 400 320 99 35 chr2 174519250 174519476 -78737107 + MIR SINE MIR 16 252 -10 21 82 0 0 chr2 174519481 174519530 -78737053 + AT_rich Low_complexity Low_complexity 1 49 0 223 389 51 25 chr2 174520035 174520310 -78736273 + L2 LINE L2 3020 3301 -12 4059 170 23 12 chr2 174520392 174521117 -78735466 + MER44D DNA MER2_type 1 605 0 291 297 10 94 chr2 174521466 174521658 -78734925 + MIR SINE MIR 38 213 -49 2413 99 0 0 chr2 174522294 174522606 -78733977 + AluSx SINE Alu 1 312 0 2212 104 3 31 chr2 174523256 174523574 -78733009 - AluSc SINE Alu 0 309 1 192 40 0 0 chr2 174523576 174523601 -78732982 + (T)n Simple_repeat Simple_repeat 1 25 0 1137 145 6 6 chr2 174523702 174523881 -78732702 - L1PA15-16 LINE L1 -6669 180 2 1857 168 24 7 chr2 174523904 174524202 -78732381 - AluJb SINE Alu -7 305 3 409 308 58 23 chr2 174524268 174524440 -78732143 + MER5B DNA MER1_type 1 178 0 202 222 19 0 chr2 174525120 174525174 -78731409 + CT-rich Low_complexity Low_complexity 3 57 0 240 167 0 0 chr2 174525276 174525324 -78731259 + CT-rich Low_complexity Low_complexity 2 49 0 546 200 27 0 chr2 174525747 174525977 -78730606 + L1MA4A LINE L1 5989 6274 -17 205 333 15 0 chr2 174526249 174526315 -78730268 + L2 LINE L2 2945 3011 -261 236 339 122 65 chr2 174527990 174528344 -78728239 + L2 LINE L2 2885 3258 -14 291 352 0 0 chr2 174528446 174528554 -78728029 - MIR SINE MIR -124 138 31 192 40 0 0 chr2 174529855 174529880 -78726703 + (CATAT)n Simple_repeat Simple_repeat 4 28 0 631 206 22 56 chr2 174531478 174531658 -78724925 + MER5B DNA MER1_type 5 178 0 936 180 12 0 chr2 174532608 174532780 -78723803 + AluJb SINE Alu 137 310 -2 206 143 0 48 chr2 174533523 174533565 -78723018 + L2 LINE L2 3164 3203 -110 207 0 0 0 chr2 174533635 174533658 -78722925 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 233 302 36 79 chr2 174534591 174534730 -78721853 + L2 LINE L2 3173 3305 -8 25 0 0 0 chr2 174535632 174535657 -78720926 + AT_rich Low_complexity Low_complexity 1 25 0 2547 53 3 0 chr2 174535795 174536098 -78720485 + AluY SINE Alu 1 304 -7 22 0 0 0 chr2 174536117 174536139 -78720444 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr2 174536741 174536772 -78719811 + AT_rich Low_complexity Low_complexity 1 31 0 1447 213 23 104 chr2 174537588 174538030 -78718553 + MLT1D-int LTR MaLR 961 1366 -5 2118 200 45 59 chr2 174538031 174538536 -78718047 + MLT1D LTR MaLR 8 505 0 279 0 0 0 chr2 174539376 174539407 -78717176 + (TG)n Simple_repeat Simple_repeat 2 32 0 35 54 0 0 chr2 174539434 174539490 -78717093 + AT_rich Low_complexity Low_complexity 1 56 0 288 209 0 29 chr2 174540030 174540135 -78716448 + CT-rich Low_complexity Low_complexity 3 104 0 25 51 0 0 chr2 174542200 174542239 -78714344 + AT_rich Low_complexity Low_complexity 1 39 0 1205 304 82 27 chr2 174542524 174543004 -78713579 - HAL1 LINE L1 -600 1907 1372 372 59 0 0 chr2 174543004 174543055 -78713528 + (TG)n Simple_repeat Simple_repeat 2 52 0 1205 304 82 27 chr2 174543055 174543289 -78713294 - HAL1 LINE L1 -1135 1372 1153 288 180 40 0 chr2 174543344 174543394 -78713189 + LTR50 LTR ERVL 100 151 -644 655 301 71 4 chr2 174545347 174545586 -78710997 - MIR SINE MIR -2 260 6 3488 72 9 0 chr2 174545868 174546329 -78710254 - L1PA5 LINE L1 0 6154 5690 426 270 145 64 chr2 174546383 174546804 -78709779 + L3 LINE CR1 914 1380 -197 2035 156 65 29 chr2 174546804 174547221 -78709362 - MSTB1 LTR MaLR 0 432 1 426 270 145 64 chr2 174547221 174547281 -78709302 + L3 LINE CR1 1380 1434 -143 22 88 0 0 chr2 174548866 174548923 -78707660 + AT_rich Low_complexity Low_complexity 1 57 0 439 269 60 7 chr2 174548971 174549120 -78707463 + L1ME3A LINE L1 4960 5116 -1030 * 3509 182 30 16 chr2 174549118 174549795 -78706788 + L1MA4 LINE L1 2 687 -4641 9246 166 43 26 chr2 174549795 174550857 -78705726 + L1MA4 LINE L1 2782 3824 -2504 552 15 0 0 chr2 174550857 174550922 -78705661 + (CA)n Simple_repeat Simple_repeat 2 66 0 9246 166 43 26 chr2 174550922 174551943 -78704640 + L1MA4 LINE L1 3824 4901 -1427 2961 193 0 0 chr2 174551977 174552564 -78704019 - L1P LINE L1 -4382 1764 1178 5689 47 5 24 chr2 174552565 174553063 -78703520 + L1PA8 LINE L1 5438 5919 -253 2189 79 45 0 chr2 174553063 174553353 -78703230 + AluY SINE Alu 1 303 -8 5689 47 5 24 chr2 174553353 174553602 -78702981 + L1PA8 LINE L1 5919 6171 -1 3953 141 60 57 chr2 174553900 174554065 -78702518 + L1MA4 LINE L1 5203 5366 -1116 269 26 0 26 chr2 174554065 174554104 -78702479 + (CAA)n Simple_repeat Simple_repeat 2 39 0 3953 141 60 57 chr2 174554104 174554920 -78701663 + L1MA4 LINE L1 5366 6204 -278 1669 265 109 14 chr2 174555091 174556019 -78700564 + L1ME3A LINE L1 5136 6160 -10 436 277 78 55 chr2 174556056 174556583 -78700000 - L1M4 LINE L1 -3354 2792 2254 833 212 35 35 chr2 174556827 174557058 -78699525 - MER39 LTR ERV1 0 707 477 215 402 0 11 chr2 174557106 174557193 -78699390 + MIR SINE MIR 20 105 -103 341 283 156 61 chr2 174557812 174557931 -78698652 - MIR SINE MIR -11 251 145 2243 159 83 5 chr2 174557931 174558326 -78698257 + MSTC LTR MaLR 1 426 -2 5002 288 86 33 chr2 174558326 174559970 -78696613 + MSTC-int LTR MaLR 2 1733 -2 2408 147 33 19 chr2 174559972 174560394 -78696189 + MSTC LTR MaLR 1 428 0 341 283 156 61 chr2 174560394 174560450 -78696133 - MIR SINE MIR -117 145 55 298 106 0 0 chr2 174561541 174561588 -78694995 - AluSp/q SINE Alu -4 299 253 851 99 0 0 chr2 174561588 174561699 -78694884 - AluSq/x SINE Alu -202 111 1 194 316 94 17 chr2 174562263 174562380 -78694203 - L2 LINE L2 -12 3301 3176 680 224 33 81 chr2 174563994 174564204 -78692379 - MER3 DNA MER1_type -3 206 7 408 222 11 11 chr2 174564824 174564914 -78691669 + MLT1A2 LTR MaLR 26 115 -250 355 233 8 8 chr2 174564914 174565034 -78691549 + GA-rich Low_complexity Low_complexity 2 121 0 195 218 0 0 chr2 174565057 174565112 -78691471 + CT-rich Low_complexity Low_complexity 2 56 0 998 201 20 15 chr2 174565113 174565312 -78691271 + MLT1A2 LTR MaLR 175 374 0 296 222 167 0 chr2 174566696 174566786 -78689797 + L2 LINE L2 3206 3310 -3 1910 128 0 7 chr2 174568611 174568892 -78687691 - AluSx SINE Alu -11 301 23 269 276 69 11 chr2 174568925 174569012 -78687571 + L2 LINE L2 3181 3272 0 1120 267 87 15 chr2 174569092 174569504 -78687079 + L1ME3A LINE L1 5529 5970 -200 1463 189 12 0 chr2 174569888 174570132 -78686451 - AluJo SINE Alu -26 286 40 1978 125 0 11 chr2 174570744 174571023 -78685560 + AluSx SINE Alu 15 290 -22 25 0 0 0 chr2 174571231 174571256 -78685327 + AT_rich Low_complexity Low_complexity 1 25 0 2554 58 0 7 chr2 174571335 174571645 -78684938 + AluY SINE Alu 1 308 -3 24 32 0 0 chr2 174571901 174571932 -78684651 + AT_rich Low_complexity Low_complexity 1 31 0 491 304 134 9 chr2 174571965 174572189 -78684394 + MIR SINE MIR 3 254 -8 1460 282 136 19 chr2 174572217 174573098 -78683485 - L2 LINE L2 -2 3311 2338 1973 170 80 5 chr2 174573876 174574252 -78682331 + MSTA LTR MaLR 25 428 0 3222 148 50 34 chr2 174574257 174574901 -78681682 + L1MA4A LINE L1 5638 6291 -12 30 0 0 0 chr2 174575184 174575214 -78681369 + AT_rich Low_complexity Low_complexity 1 30 0 186 286 63 0 chr2 174575703 174575766 -78680817 - MIR SINE MIR -83 179 113 340 271 182 0 chr2 174576356 174576526 -78680057 + Tigger8 DNA MER2_type 192 392 -274 30 27 0 0 chr2 174577103 174577140 -78679443 + AT_rich Low_complexity Low_complexity 1 37 0 1982 143 3 3 chr2 174579005 174579298 -78677285 + AluSx SINE Alu 7 299 -13 268 303 131 23 chr2 174579539 174579714 -78676869 + MIR SINE MIR 69 262 0 2001 98 22 4 chr2 174581137 174581443 -78675140 - AluSg1 SINE Alu 0 311 1 1177 283 132 0 chr2 174582603 174582967 -78673616 - LTR16C LTR ERVL 0 491 80 330 318 65 20 chr2 174586733 174587091 -78669492 - L1MDb LINE L1 -3855 2551 2215 318 277 72 30 chr2 174587535 174587827 -78668756 - L1MDb LINE L1 -4915 1481 1162 265 234 48 57 chr2 174587979 174588103 -78668480 - L1MC4 LINE L1 0 8042 7920 412 328 116 33 chr2 174588865 174589167 -78667416 + L2 LINE L2 2837 3163 -150 23 54 0 0 chr2 174589643 174589680 -78666903 + AT_rich Low_complexity Low_complexity 1 37 0 308 296 22 80 chr2 174591216 174591442 -78665141 + MIR SINE MIR 48 260 -2 24 32 0 0 chr2 174592997 174593028 -78663555 + AT_rich Low_complexity Low_complexity 1 31 0 785 286 56 47 chr2 174593149 174593597 -78662986 - L1ME4a LINE L1 -222 5899 5448 460 359 50 27 chr2 174593630 174593928 -78662655 + L3 LINE CR1 399 703 -874 509 264 96 38 chr2 174593951 174594243 -78662340 + L1MC4a LINE L1 5598 5906 -1902 2164 231 50 0 chr2 174594320 174594762 -78661821 + MLT2B1 LTR ERVL 1 464 -56 299 105 18 0 chr2 174594795 174594852 -78661731 + (TC)n Simple_repeat Simple_repeat 1 58 0 317 157 0 28 chr2 174594852 174594921 -78661662 + MLT2D LTR ERVL 366 412 -2 585 232 0 40 chr2 174594922 174595073 -78661510 + ERVL-D LTR ERVL 2 146 -5618 2415 206 44 40 chr2 174595194 174595737 -78660846 + ERVL-D LTR ERVL 332 876 -4888 420 20 0 0 chr2 174595800 174595849 -78660734 + (TG)n Simple_repeat Simple_repeat 2 50 0 1359 186 73 0 chr2 174595850 174596098 -78660485 - MLT2B1 LTR ERVL -254 266 1 22 35 0 0 chr2 174596207 174596236 -78660347 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr2 174596853 174596876 -78659707 + AT_rich Low_complexity Low_complexity 1 23 0 243 158 70 0 chr2 174597303 174597360 -78659223 - L1ME LINE L1 -222 5899 5839 255 256 77 0 chr2 174597458 174597536 -78659047 - L1ME LINE L1 -452 5669 5586 1886 132 11 4 chr2 174597635 174597943 -78658640 + AluSx SINE Alu 1 310 0 182 259 37 62 chr2 174648334 174648415 -78608168 - L3 LINE CR1 -73 1504 1426 185 321 57 19 chr2 174650210 174650263 -78606320 + L2 LINE L2 3193 3247 -25 198 118 0 0 chr2 174650274 174650308 -78606275 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 942 231 49 7 chr2 174650373 174650659 -78605924 - MER33 DNA MER1_type 0 324 27 297 0 0 0 chr2 174651147 174651180 -78605403 + (TA)n Simple_repeat Simple_repeat 2 34 0 329 316 60 40 chr2 174651221 174651690 -78604893 - L1ME LINE L1 -1333 4813 4336 292 250 250 10 chr2 174651732 174651836 -78604747 - MIR SINE MIR -73 189 61 413 319 0 0 chr2 174652500 174652613 -78603970 + MER117 DNA MER1_type 85 197 0 275 308 112 0 chr2 174652613 174652720 -78603863 - MIR3 SINE MIR -48 160 42 650 258 129 45 chr2 174653459 174653792 -78602791 + L2 LINE L2 2953 3313 0 256 392 70 0 chr2 174654044 174654215 -78602368 - L3b LINE CR1 -105 1478 1296 2950 110 22 10 chr2 174655132 174655632 -78600951 - SVA Other Other -659 727 222 8480 39 8 2 chr2 174655632 174657458 -78599125 + L1PA3 LINE L1 4318 6150 -5 278 328 60 26 chr2 174657526 174657642 -78598941 - MIR3 SINE MIR -51 157 38 372 381 45 6 chr2 174657834 174658010 -78598573 + MER5A DNA MER1_type 1 183 -6 6702 188 51 19 chr2 174658502 174661392 -78595191 - L1MC1 LINE L1 0 6333 3353 258 266 35 35 chr2 174661753 174661866 -78594717 - MER103 DNA DNA -20 146 34 473 312 102 14 chr2 174665716 174665931 -78590652 - L3 LINE CR1 -525 1052 819 599 308 33 14 chr2 174665940 174666154 -78590429 + MIR SINE MIR 31 248 -14 1083 299 48 6 chr2 174666262 174666613 -78589970 - L3 LINE CR1 -779 798 433 288 102 0 0 chr2 174667450 174667499 -78589084 + (T)n Simple_repeat Simple_repeat 1 49 0 182 362 43 0 chr2 174668293 174668362 -78588221 + MIR3 SINE MIR 89 160 -48 21 0 0 0 chr2 174670261 174670282 -78586301 + AT_rich Low_complexity Low_complexity 1 21 0 267 209 0 0 chr2 174670303 174670346 -78586237 + MER5B DNA MER1_type 2 44 -134 273 75 0 0 chr2 174670360 174670400 -78586183 + (T)n Simple_repeat Simple_repeat 1 40 0 4027 187 67 17 chr2 174675358 174676161 -78580422 - MER21B LTR ERV1 -20 843 1 1581 279 105 20 chr2 174676257 174677096 -78579487 + L1ME3A LINE L1 5254 6157 -13 2291 97 0 0 chr2 174677252 174677551 -78579032 - AluY SINE Alu -12 299 1 309 222 58 105 chr2 174678267 174678438 -78578145 - MIR SINE MIR -5 257 95 478 249 119 34 chr2 174679391 174679688 -78576895 - L1ME LINE L1 -522 5599 5290 24 32 0 0 chr2 174679731 174679762 -78576821 + AT_rich Low_complexity Low_complexity 1 31 0 874 82 8 8 chr2 174679771 174679905 -78576678 + (TTCC)n Simple_repeat Simple_repeat 3 136 0 1666 175 10 20 chr2 174679906 174680198 -78576385 - AluJo SINE Alu -23 289 1 22 35 0 0 chr2 174680658 174680687 -78575896 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr2 174680700 174680729 -78575854 + AT_rich Low_complexity Low_complexity 1 29 0 2626 50 0 0 chr2 174681017 174681319 -78575264 + AluY SINE Alu 1 302 -9 855 133 13 27 chr2 174681319 174681469 -78575114 + L1PA11 LINE L1 6024 6171 -3 632 315 52 14 chr2 174681911 174682197 -78574386 - L2 LINE L2 -1 3312 3016 1717 276 130 20 chr2 174682239 174682412 -78574171 - L2 LINE L2 -417 2897 2744 1609 179 7 14 chr2 174682412 174682725 -78573858 - AluJo SINE Alu 0 311 1 198 71 0 0 chr2 174682730 174682758 -78573825 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1717 276 130 20 chr2 174682758 174683222 -78573361 - L2 LINE L2 -573 2741 2182 320 306 124 12 chr2 174683988 174684318 -78572265 + L1MC4a LINE L1 5543 5909 -1899 28 0 0 0 chr2 174684560 174684588 -78571995 + AT_rich Low_complexity Low_complexity 1 28 0 1951 147 23 0 chr2 174685583 174685883 -78570700 + AluSx SINE Alu 1 307 -5 320 355 117 9 chr2 174687320 174687542 -78569041 + MIR SINE MIR 3 254 -8 359 296 86 37 chr2 174687840 174688002 -78568581 - MIR3 SINE MIR -1 207 38 2307 98 0 10 chr2 174688058 174688365 -78568218 - AluY SINE Alu -7 304 1 235 185 19 19 chr2 174689227 174689281 -78567302 + (CATATA)n Simple_repeat Simple_repeat 6 59 0 350 245 78 88 chr2 174689920 174690112 -78566471 - MIR3 SINE MIR -2 206 17 2400 197 14 71 chr2 174691307 174691946 -78564637 - L1MB8 LINE L1 0 6178 5573 1934 109 41 0 chr2 174692008 174692300 -78564283 - AluSc SINE Alu 0 303 1 275 263 53 13 chr2 174692533 174692609 -78563974 - MIR SINE MIR -87 175 97 432 278 53 20 chr2 174692876 174693027 -78563556 - MIR SINE MIR -87 175 20 358 212 0 81 chr2 174694686 174694785 -78561798 + MIR SINE MIR 106 196 -66 759 308 76 26 chr2 174696551 174696973 -78559610 - MLT1G1 LTR MaLR -15 580 138 308 315 111 22 chr2 174697029 174697210 -78559373 - MIR SINE MIR -32 230 34 335 284 142 43 chr2 174698661 174698802 -78557781 - MLT1J2 LTR MaLR -249 201 47 180 77 0 0 chr2 174698805 174698831 -78557752 + (TG)n Simple_repeat Simple_repeat 1 26 0 566 326 159 8 chr2 174700646 174701036 -78555547 - MLT1L LTR MaLR 0 615 167 1250 119 68 0 chr2 174702239 174702458 -78554125 + L1PA15 LINE L1 5932 6165 0 37 0 0 0 chr2 174702493 174702530 -78554053 + AT_rich Low_complexity Low_complexity 1 37 0 261 0 0 0 chr2 174703663 174703692 -78552891 + (TTA)n Simple_repeat Simple_repeat 2 30 0 510 284 43 23 chr2 174704428 174704727 -78551856 + L1ME4a LINE L1 5593 5897 -224 28 29 0 0 chr2 174704727 174704762 -78551821 + AT_rich Low_complexity Low_complexity 1 35 0 248 323 10 0 chr2 174705303 174705402 -78551181 + L1M4 LINE L1 4100 4199 -1947 2360 78 0 3 chr2 174707045 174707340 -78549243 + AluY SINE Alu 1 294 -17 4231 205 12 9 chr2 174707344 174708223 -78548360 - L1MC2 LINE L1 -37 6307 5426 225 0 0 0 chr2 174708390 174708415 -78548168 + (TG)n Simple_repeat Simple_repeat 2 26 0 269 366 69 11 chr2 174709287 174709462 -78547121 - MER5A DNA MER1_type -4 185 1 28 29 0 0 chr2 174709727 174709762 -78546821 + AT_rich Low_complexity Low_complexity 1 35 0 260 53 26 0 chr2 174709824 174709862 -78546721 + Alu SINE Alu 256 294 -7 22 35 0 0 chr2 174710213 174710242 -78546341 + AT_rich Low_complexity Low_complexity 1 29 0 192 255 66 85 chr2 174710324 174710430 -78546153 - MER5A DNA MER1_type -25 164 61 2350 82 7 0 chr2 174710839 174711144 -78545439 - AluSp SINE Alu -6 307 1 298 239 28 0 chr2 174712060 174712131 -78544452 - L2 LINE L2 -16 3297 3225 1356 213 16 75 chr2 174712147 174712462 -78544121 + MLT1A1 LTR MaLR 1 292 -73 935 26 0 0 chr2 174712462 174712575 -78544008 + L1PA4 LINE L1 6039 6151 -4 1356 213 16 75 chr2 174712575 174712635 -78543948 + MLT1A1 LTR MaLR 292 354 -11 475 332 55 30 chr2 174712703 174712938 -78543645 - L2 LINE L2 -179 3134 2894 212 182 0 23 chr2 174715479 174715523 -78541060 + (TG)n Simple_repeat Simple_repeat 1 43 0 30 45 0 0 chr2 174716848 174716892 -78539691 + AT_rich Low_complexity Low_complexity 1 44 0 225 0 0 0 chr2 174717236 174717261 -78539322 + (A)n Simple_repeat Simple_repeat 1 25 0 214 229 96 51 chr2 174717580 174717751 -78538832 - L2 LINE L2 -1 3271 3092 1893 129 153 47 chr2 174717938 174718275 -78538308 - MSTA LTR MaLR 0 428 43 2309 100 3 0 chr2 174718275 174718586 -78537997 + AluSq SINE Alu 1 312 -1 1893 129 153 47 chr2 174718586 174718635 -78537948 - MSTA LTR MaLR -385 43 1 554 261 32 37 chr2 174720098 174720153 -78536430 + L1MC4a LINE L1 5742 5796 -2012 1874 180 39 0 chr2 174720153 174720487 -78536096 + MER7A DNA MER2_type 1 345 -1 554 261 32 37 chr2 174720487 174720649 -78535934 + L1MC4a LINE L1 5796 5958 -1850 231 279 58 0 chr2 174720729 174720815 -78535768 + L1MC4a LINE L1 6078 6168 -1640 2119 103 7 0 chr2 174721296 174721586 -78534997 + AluSx SINE Alu 1 292 -20 2237 91 3 7 chr2 174722740 174723036 -78533547 + AluSc SINE Alu 4 298 -11 1520 188 61 17 chr2 174723359 174723705 -78532878 - MLT1A1 LTR MaLR 0 365 5 2405 76 0 19 chr2 174723743 174724060 -78532523 - AluY SINE Alu 0 311 1 274 202 119 12 chr2 174724506 174724590 -78531993 - L2 LINE L2 -842 2472 2380 888 289 131 41 chr2 174724795 174725566 -78531017 - L2 LINE L2 -13 3300 2465 1245 266 6 12 chr2 174726989 174727309 -78529274 - L2 LINE L2 -840 2474 2157 2098 129 38 30 chr2 174727569 174727941 -78528642 + THE1C LTR MaLR 1 375 0 236 214 225 11 chr2 174728023 174728112 -78528471 + L1ME4a LINE L1 5979 6086 -35 527 193 102 96 chr2 174728253 174728440 -78528143 - L2 LINE L2 -21 3292 3105 774 272 55 3 chr2 174728485 174728797 -78527786 - L1M4 LINE L1 -2022 4124 3797 357 195 0 67 chr2 174728843 174728963 -78527620 + L1MC4 LINE L1 1996 6983 -1339 1493 181 4 29 chr2 174728970 174729247 -78527336 - AluJb SINE Alu -26 286 17 48 32 0 0 chr2 174729262 174729324 -78527259 + AT_rich Low_complexity Low_complexity 1 62 0 334 276 59 54 chr2 174729333 174729536 -78527047 + L1MC5 LINE L1 7242 7445 -516 289 289 0 31 chr2 174729547 174729644 -78526939 + L1M4 LINE L1 4031 4124 -2022 335 215 65 9 chr2 174729780 174729887 -78526696 + L1MC5 LINE L1 7603 7715 -246 2255 99 0 3 chr2 174730224 174730526 -78526057 - AluY SINE Alu -10 301 1 28 48 0 0 chr2 174730533 174730575 -78526008 + AT_rich Low_complexity Low_complexity 1 42 0 590 222 153 0 chr2 174730753 174730929 -78525654 - LTR50 LTR ERVL -590 205 3 248 358 149 8 chr2 174730997 174731131 -78525452 + MIR SINE MIR 1 153 -109 228 363 102 62 chr2 174732549 174732805 -78523778 + L2 LINE L2 2586 2851 -463 * 557 271 55 55 chr2 174732795 174733013 -78523570 + MIR SINE MIR 30 247 -15 201 200 40 0 chr2 174733023 174733073 -78523510 + (TTG)n Simple_repeat Simple_repeat 2 53 0 189 0 0 0 chr2 174733270 174733291 -78523292 + (TA)n Simple_repeat Simple_repeat 1 21 0 183 336 48 62 chr2 174733300 174733446 -78523137 + L2 LINE L2 3170 3313 0 289 319 0 0 chr2 174734508 174734577 -78522006 - tRNA-Ile-ATT tRNA tRNA -3 74 6 242 323 15 0 chr2 174735184 174735249 -78521334 + tRNA-Ile-ATT tRNA tRNA 9 74 -3 23 0 0 0 chr2 174735728 174735751 -78520832 + AT_rich Low_complexity Low_complexity 1 23 0 1700 148 97 0 chr2 174736109 174736387 -78520196 + AluSx SINE Alu 1 305 -7 7923 122 16 5 chr2 174736428 174737642 -78518941 - HSMAR2 DNA Mariner -7 1295 68 448 301 103 24 chr2 174737711 174738050 -78518533 - L1ME4a LINE L1 -257 5864 5499 252 111 0 0 chr2 174738294 174738339 -78518244 + LTR66 LTR ERVL 394 438 -172 391 288 152 18 chr2 174739635 174739746 -78516837 - L1MC4a LINE L1 -1689 6119 6024 2030 131 3 7 chr2 174739746 174740044 -78516539 - AluSx SINE Alu -15 297 1 391 288 152 18 chr2 174740044 174740321 -78516262 - L1MC4a LINE L1 -1784 6024 5679 278 294 0 0 chr2 174740337 174740405 -78516178 - L1MC4a LINE L1 -504 5617 5550 203 212 188 24 chr2 174740655 174740740 -78515843 - L3b LINE CR1 -286 1297 1199 553 321 59 53 chr2 174741118 174741592 -78514991 - L1MC4a LINE L1 -1907 5884 5408 36 70 0 0 chr2 174741699 174741770 -78514813 + AT_rich Low_complexity Low_complexity 1 71 0 2301 223 49 38 chr2 174741782 174741939 -78514644 - L1MC3 LINE L1 -722 7063 6909 1417 172 88 44 chr2 174741939 174742236 -78514347 - AluJo SINE Alu 0 312 3 2301 223 49 38 chr2 174742236 174742786 -78513797 - L1MC3 LINE L1 -876 6909 6348 339 279 82 0 chr2 174743086 174743244 -78513339 - L1ME4a LINE L1 -1 6120 5950 461 356 92 26 chr2 174744417 174744784 -78511799 + L2 LINE L2 2746 3134 -179 322 326 69 21 chr2 174744830 174744974 -78511609 + MIR SINE MIR 20 170 -92 1988 330 139 22 chr2 174745199 174746629 -78509954 + L2 LINE L2 1714 3313 0 256 392 70 0 chr2 174746881 174747052 -78509531 - L3b LINE CR1 -105 1478 1296 343 204 57 19 chr2 174748236 174748373 -78508210 - L1MC4a LINE L1 -719 5430 5287 198 118 0 0 chr2 174748721 174748755 -78507828 + (CA)n Simple_repeat Simple_repeat 2 35 0 917 232 187 61 chr2 174748884 174749032 -78507551 - L1MC4a LINE L1 -1779 4350 4222 2338 101 3 0 chr2 174749032 174749338 -78507245 - AluSp SINE Alu -6 307 1 917 232 187 61 chr2 174749338 174749792 -78506791 - L1MC4a LINE L1 -1907 4222 3672 505 292 75 35 chr2 174749968 174750566 -78506017 - L1MEd LINE L1 -4657 1653 987 397 296 177 14 chr2 174751037 174751257 -78505326 - MIR SINE MIR -6 256 1 229 263 118 0 chr2 174751462 174751538 -78505045 - MER91B DNA MER1_type -103 87 3 1974 121 59 0 chr2 174752095 174752384 -78504199 - AluSx SINE Alu -6 306 1 181 230 0 46 chr2 174752443 174752530 -78504053 + GA-rich Low_complexity Low_complexity 4 86 0 2099 137 51 11 chr2 174753206 174753556 -78503027 - THE1B LTR MaLR 0 364 1 201 243 24 136 chr2 174753693 174753862 -78502721 + L2 LINE L2 2385 2534 -780 1904 140 13 3 chr2 174754000 174754300 -78502283 - AluSx SINE Alu -9 303 1 192 228 0 0 chr2 174754535 174754592 -78501991 + (TA)n Simple_repeat Simple_repeat 1 57 0 36 0 0 0 chr2 174755989 174756025 -78500558 + AT_rich Low_complexity Low_complexity 1 36 0 562 255 153 6 chr2 174756470 174756627 -78499956 + MER5A DNA MER1_type 10 189 0 23 0 0 0 chr2 174758301 174758324 -78498259 + AT_rich Low_complexity Low_complexity 1 23 0 530 296 160 29 chr2 174759995 174760414 -78496169 - MLT1L LTR MaLR -15 600 127 2044 134 3 7 chr2 174760466 174760771 -78495812 - AluSx SINE Alu -6 306 3 640 188 48 105 chr2 174760991 174761220 -78495363 - LTR12 LTR ERV1 -251 463 248 829 191 57 81 chr2 174761332 174761615 -78494968 - LTR37A LTR ERV1 -133 293 18 5096 158 19 14 chr2 174762098 174762988 -78493595 - MER4D LTR ERV1 -8 895 1 201 328 15 0 chr2 174763436 174763503 -78493080 + L2 LINE L2 3201 3268 -4 2351 101 3 0 chr2 174763878 174764185 -78492398 + AluSc SINE Alu 1 308 -1 2068 87 15 0 chr2 174764240 174764506 -78492077 + AluSc SINE Alu 1 270 -39 28 71 0 0 chr2 174764760 174764816 -78491767 + AT_rich Low_complexity Low_complexity 1 56 0 345 330 30 66 chr2 174766083 174766280 -78490303 + L2 LINE L2 3083 3272 0 312 304 13 19 chr2 174766391 174766414 -78490169 - L1MA10 LINE L1 -14 6320 6298 1238 209 47 0 chr2 174766414 174766692 -78489891 - L1ME2 LINE L1 -27 6137 5847 1096 273 62 90 chr2 174768335 174768517 -78488066 - MER77 LTR ERV1 -28 577 392 1764 144 107 3 chr2 174768517 174768844 -78487739 - MER46B DNA MER2_type 0 236 1 1096 273 62 90 chr2 174768844 174769310 -78487273 - MER77 LTR ERV1 -213 392 54 317 302 0 93 chr2 174770069 174770127 -78486456 - MIR SINE MIR -69 139 98 2135 111 7 3 chr2 174770127 174770424 -78486159 + AluSg SINE Alu 1 298 -12 317 302 0 93 chr2 174770424 174770494 -78486089 - MIR SINE MIR -110 98 23 306 230 243 7 chr2 174770798 174770950 -78485633 - MIR3 SINE MIR -2 206 19 1181 228 98 25 chr2 174771088 174771383 -78485200 + MLT1J LTR MaLR 101 430 -81 474 75 0 0 chr2 174771383 174771450 -78485133 + (TG)n Simple_repeat Simple_repeat 1 67 0 1181 228 98 25 chr2 174771450 174771522 -78485061 + MLT1J LTR MaLR 430 495 -16 218 213 160 0 chr2 174771940 174772015 -78484568 - MIR SINE MIR -81 181 95 1059 261 113 7 chr2 174773542 174773948 -78482635 - MLT1J2 LTR MaLR 0 450 2 282 406 35 0 chr2 174774225 174774368 -78482215 + MER91A DNA MER1_type 1 148 -48 266 254 0 17 chr2 174774435 174774494 -78482089 + MER91A DNA MER1_type 133 190 0 395 232 66 122 chr2 174774831 174775012 -78481571 + MIR3 SINE MIR 32 202 -6 22 35 0 0 chr2 174775122 174775151 -78481432 + AT_rich Low_complexity Low_complexity 1 29 0 368 262 95 36 chr2 174776047 174776215 -78480368 - MIR3 SINE MIR -13 195 18 696 308 63 4 chr2 174776762 174776999 -78479584 + MIR SINE MIR 1 251 -11 289 197 91 0 chr2 174779582 174779648 -78476935 - MIR SINE MIR -73 189 118 35034 46 2 2 chr2 174781034 174785363 -78471220 + L1P LINE L1 5 4332 -1814 5985 80 6 71 chr2 174785363 174786376 -78470207 - SVA Other Other -1 1385 439 357 247 82 27 chr2 174786554 174786700 -78469883 + L1 LINE L1 4357 4510 -1636 296 161 16 0 chr2 174787125 174787187 -78469396 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 2461 152 75 37 chr2 174787419 174787938 -78468645 + L1MA8 LINE L1 5753 6291 0 905 253 20 33 chr2 174788004 174788249 -78468334 - MIR SINE MIR 0 262 21 232 228 101 13 chr2 174788532 174788611 -78467972 + L1ME LINE L1 5546 5631 -490 1936 131 29 0 chr2 174788699 174788998 -78467585 + AluSx SINE Alu 1 307 0 965 258 79 72 chr2 174789222 174789831 -78466752 - MLT1L LTR MaLR -2 613 1 285 319 78 60 chr2 174789957 174790123 -78466460 - MIR3 SINE MIR -5 203 35 2976 222 113 14 chr2 174790553 174791479 -78465104 - L1MD3 LINE L1 -8 8028 7024 319 237 92 61 chr2 174791637 174791768 -78464815 + L2 LINE L2 3152 3286 -27 375 348 80 26 chr2 174792084 174792397 -78464186 - L2 LINE L2 0 3313 2984 299 331 43 49 chr2 174792593 174792756 -78463827 - L2 LINE L2 -426 2888 2727 1183 204 57 37 chr2 174792810 174793055 -78463528 - MER82 DNA MER2_type -14 639 390 1862 167 13 3 chr2 174793366 174793666 -78462917 - AluJb SINE Alu -9 303 1 2573 63 0 118 chr2 174793870 174794295 -78462288 + THE1C LTR MaLR 1 375 0 617 329 167 22 chr2 174794423 174794873 -78461710 + MLT1L LTR MaLR 93 607 -8 427 209 0 0 chr2 174794903 174794989 -78461594 + HsTC2 DNA Tc2 2 87 -1811 252 150 0 0 chr2 174794963 174795003 -78461580 + HsTC2 DNA Tc2 1856 1895 -3 * 5350 64 26 3 chr2 174795330 174796046 -78460537 + L1PA7 LINE L1 5422 6154 0 193 320 48 48 chr2 174796283 174796408 -78460175 - L2 LINE L2 -222 3050 2926 498 297 169 0 chr2 174796740 174796935 -78459648 - MIR SINE MIR -30 232 5 414 0 0 0 chr2 174798227 174798273 -78458310 + (TA)n Simple_repeat Simple_repeat 2 47 0 516 294 2 2 chr2 174798503 174798694 -78457889 - L1MC4a LINE L1 -1211 6597 6433 270 254 15 30 chr2 174799303 174799370 -78457213 + L2 LINE L2 3161 3226 -46 3444 218 8 48 chr2 174799480 174800465 -78456118 - L1ME1 LINE L1 -41 6125 5180 439 268 14 21 chr2 174802347 174802489 -78454094 + MIR SINE MIR 82 222 -40 373 288 34 38 chr2 174802821 174803057 -78453526 + L1MC4 LINE L1 7795 8029 -13 222 217 17 17 chr2 174803178 174803238 -78453345 + CT-rich Low_complexity Low_complexity 2 61 0 326 172 17 0 chr2 174803773 174803831 -78452752 - U7 snRNA snRNA -3 60 2 210 71 0 0 chr2 174804052 174804080 -78452503 + (T)n Simple_repeat Simple_repeat 1 28 0 6941 62 0 0 chr2 174804091 174805365 -78451218 - L1PA7 LINE L1 0 6154 4878 18816 89 130 13 chr2 174805365 174808371 -78448212 + L1PA7 LINE L1 1523 4878 -1268 4992 60 0 5 chr2 174808659 174809293 -78447290 + L1PA7 LINE L1 5524 6154 0 2787 143 30 2 chr2 174809655 174810129 -78446454 - L1MA4A LINE L1 -3 6300 5814 369 225 62 12 chr2 174811147 174811227 -78445356 + MIR SINE MIR 47 130 -78 276 316 7 29 chr2 174812902 174813038 -78443545 + Charlie8 DNA MER1_type 20 152 -2265 430 269 21 21 chr2 174813542 174813683 -78442900 + L2 LINE L2 1790 1930 -1384 482 308 29 0 chr2 174813690 174813862 -78442721 + MIR SINE MIR 86 262 0 1000 276 138 13 chr2 174813893 174814277 -78442306 + L2 LINE L2 1960 2391 -923 218 250 0 36 chr2 174814800 174814856 -78441727 + L2 LINE L2 3003 3056 -257 319 98 0 0 chr2 174814883 174814924 -78441659 + Alu SINE Alu 2 42 -260 420 255 66 80 chr2 174814977 174815189 -78441394 + L2 LINE L2 3105 3313 0 2554 68 0 0 chr2 174816787 174817095 -78439488 + AluY SINE Alu 2 309 -2 2201 117 0 28 chr2 174817841 174818158 -78438425 - AluSx SINE Alu -4 308 1 280 281 73 0 chr2 174818340 174818436 -78438147 - MIR3 SINE MIR -9 199 97 190 337 74 31 chr2 174819858 174820021 -78436562 + L2 LINE L2 2227 2396 -918 1294 97 0 0 chr2 174820073 174820258 -78436325 - L1MA1 LINE L1 0 6302 6118 1856 176 31 21 chr2 174821584 174821970 -78434613 - L1MB5 LINE L1 -8 6166 5777 2061 233 21 21 chr2 174821971 174822551 -78434032 - L1MB5 LINE L1 -1763 4383 3804 1586 205 61 22 chr2 174822603 174823013 -78433570 - L1MB5 LINE L1 -2280 3866 3441 324 0 0 0 chr2 174823523 174823559 -78433024 + (TG)n Simple_repeat Simple_repeat 1 36 0 412 234 0 43 chr2 174823854 174823948 -78432635 - L2 LINE L2 -1 3271 3182 287 344 21 0 chr2 174824619 174824715 -78431868 + MIR SINE MIR 48 145 -63 204 324 15 0 chr2 174825201 174825269 -78431314 + (TG)n Simple_repeat Simple_repeat 2 70 0 707 262 114 13 chr2 174826331 174826568 -78430015 + MIR SINE MIR 2 262 0 1605 203 20 7 chr2 174826777 174827082 -78429501 - AluJo SINE Alu -3 309 1 245 276 66 0 chr2 174829175 174829251 -78427332 - L2 LINE L2 -8 3264 3184 532 335 41 49 chr2 174829342 174829733 -78426850 - L2 LINE L2 -878 2436 2049 21 82 0 0 chr2 174830080 174830129 -78426454 + AT_rich Low_complexity Low_complexity 1 49 0 234 354 44 0 chr2 174830236 174830349 -78426234 + L3 LINE CR1 1312 1429 -148 426 304 14 58 chr2 174830369 174830576 -78426007 - L2 LINE L2 -11 3302 3105 219 321 71 60 chr2 174830591 174830775 -78425808 - L2 LINE L2 -1636 1678 1493 632 223 102 12 chr2 174830783 174830949 -78425634 - MER63A DNA MER1_type -29 181 1 394 222 10 10 chr2 174833081 174833180 -78423403 - HsTC2 DNA Tc2 -1796 102 4 808 223 53 10 chr2 174833769 174833975 -78422608 - MER20 DNA MER1_type -4 215 1 662 157 0 0 chr2 174834621 174834729 -78421854 - L1MC1 LINE L1 -18 6315 6208 1226 258 92 10 chr2 174834813 174835223 -78421360 + L2 LINE L2 2594 3036 -277 38127 37 24 3 chr2 174835242 174841261 -78415322 - L1PA3 LINE L1 0 6155 2 216 299 52 43 chr2 174841262 174841473 -78415110 + L2 LINE L2 3024 3236 -77 4632 248 91 10 chr2 174842041 174843246 -78413337 + L1M3c LINE L1 239 1540 -4601 3688 225 74 9 chr2 174843251 174844336 -78412247 + L1M3c LINE L1 2326 3480 -2730 804 248 39 10 chr2 174844833 174845039 -78411544 + MIR SINE MIR 36 247 -15 30 0 0 0 chr2 174845890 174845920 -78410663 + AT_rich Low_complexity Low_complexity 1 30 0 34 24 0 0 chr2 174847139 174847180 -78409403 + AT_rich Low_complexity Low_complexity 1 41 0 1770 235 135 50 chr2 174847573 174848293 -78408290 - MER20B DNA MER1_type 0 783 3 411 160 0 0 chr2 174848765 174848840 -78407743 + (CA)n Simple_repeat Simple_repeat 2 76 0 1671 128 98 0 chr2 174848856 174849121 -78407462 - AluSq SINE Alu -22 291 1 674 253 128 32 chr2 174849294 174849606 -78406977 + L1MA9 LINE L1 5933 6274 -38 2351 132 5 13 chr2 174849992 174850370 -78406213 - THE1C LTR MaLR 0 375 1 718 304 22 13 chr2 174850514 174850738 -78405845 - MIR SINE MIR 0 262 37 2461 82 0 6 chr2 174851388 174851703 -78404880 - AluSp SINE Alu 0 313 1 1076 83 0 0 chr2 174851703 174851836 -78404747 - AluSp SINE Alu -178 135 3 398 293 180 6 chr2 174851949 174852116 -78404467 + MIR SINE MIR 61 256 -6 180 0 0 0 chr2 174852691 174852711 -78403872 + (GA)n Simple_repeat Simple_repeat 1 20 0 23 0 0 0 chr2 174853530 174853553 -78403030 + AT_rich Low_complexity Low_complexity 1 23 0 344 296 9 35 chr2 174854821 174854936 -78401647 - MER5A DNA MER1_type -4 185 74 1664 173 36 0 chr2 174855731 174856008 -78400575 + AluJb SINE Alu 1 287 -25 189 0 0 0 chr2 174856031 174856052 -78400531 + (CA)n Simple_repeat Simple_repeat 2 22 0 533 360 39 42 chr2 174856207 174856540 -78400043 + L2 LINE L2 2941 3272 0 662 197 8 16 chr2 174857549 174857676 -78398907 - FLAM_A SINE Alu -7 126 1 557 318 87 4 chr2 174857821 174858063 -78398520 - L2 LINE L2 -338 2976 2715 248 304 104 44 chr2 174860392 174860527 -78396056 + MIR SINE MIR 18 160 -102 2219 178 52 34 chr2 174860540 174861136 -78395447 + L1MDa LINE L1 1074 1680 -4860 1986 161 53 23 chr2 174861388 174861823 -78394760 + L1MDa LINE L1 1681 2128 -4412 968 294 90 13 chr2 174861853 174862231 -78394352 - L2 LINE L2 -528 2786 2380 31 82 0 0 chr2 174862477 174862550 -78394033 + AT_rich Low_complexity Low_complexity 1 73 0 29 70 0 0 chr2 174862646 174862703 -78393880 + AT_rich Low_complexity Low_complexity 1 57 0 22 0 0 0 chr2 174863307 174863329 -78393254 + AT_rich Low_complexity Low_complexity 1 22 0 351 223 98 27 chr2 174863853 174863965 -78392618 + L2 LINE L2 3187 3306 -7 25 51 0 0 chr2 174865070 174865109 -78391474 + AT_rich Low_complexity Low_complexity 1 39 0 592 264 93 41 chr2 174866117 174866363 -78390220 - MLT1A1 LTR MaLR -5 550 292 * 830 179 46 7 chr2 174866358 174866509 -78390074 - MLT1A1 LTR MaLR -208 157 1 852 244 108 6 chr2 174866509 174866833 -78389750 + Charlie2 DNA MER1_type 1839 2195 -667 559 261 48 56 chr2 174866882 174867106 -78389477 - MLT1H1 LTR MaLR -276 273 11 778 310 63 22 chr2 174868102 174868421 -78388162 - MLT1J LTR MaLR -179 332 1 525 290 70 16 chr2 174868514 174868700 -78387883 + MIR SINE MIR 66 261 -1 468 285 21 7 chr2 174869158 174869302 -78387281 + MIR SINE MIR 102 247 -15 234 308 103 27 chr2 174870712 174870858 -78385725 - MIR3 SINE MIR -31 177 21 225 0 0 0 chr2 174871665 174871690 -78384893 + (T)n Simple_repeat Simple_repeat 1 25 0 2189 121 0 0 chr2 174872007 174872297 -78384286 - AluSq SINE Alu -23 290 1 1126 197 28 9 chr2 174872334 174872547 -78384036 + AluJb SINE Alu 85 301 -11 317 276 102 8 chr2 174873259 174873386 -78383197 - MIR SINE MIR 0 262 124 460 282 77 59 chr2 174875375 174875606 -78380977 - MIR SINE MIR -14 248 17 2479 63 0 0 chr2 174876184 174876487 -78380096 + AluY SINE Alu 1 303 -8 1015 151 117 6 chr2 174878076 174878255 -78378328 - MER3 DNA MER1_type -10 199 1 1710 214 107 66 chr2 174879054 174879614 -78376969 + MLT1G1 LTR MaLR 5 587 -8 1490 234 52 46 chr2 174879648 174880109 -78376474 - MLT1D LTR MaLR -41 464 1 2268 99 3 3 chr2 174880663 174880965 -78375618 + AluSp SINE Alu 1 302 -11 218 235 94 24 chr2 174881965 174882050 -78374533 - MIR SINE MIR -44 218 128 350 260 55 39 chr2 174882110 174882237 -78374346 + MIR SINE MIR 119 247 -15 360 268 0 12 chr2 174882626 174882708 -78373875 - MIR3 SINE MIR -12 196 116 821 289 205 18 chr2 174883019 174883701 -78372882 + L2 LINE L2 2458 3272 0 26 0 0 0 chr2 174883939 174883965 -78372618 + AT_rich Low_complexity Low_complexity 1 26 0 1707 186 0 10 chr2 174883969 174884264 -78372319 + AluSx SINE Alu 3 294 -18 21 36 0 0 chr2 174885615 174885643 -78370940 + AT_rich Low_complexity Low_complexity 1 28 0 1503 197 96 40 chr2 174888605 174889349 -78367234 - L1MDa LINE L1 -3634 2906 2122 207 167 0 0 chr2 174889474 174889516 -78367067 + CT-rich Low_complexity Low_complexity 2 43 0 1154 21 28 7 chr2 174889579 174889724 -78366859 - L1PA4 LINE L1 -2 6153 6006 728 311 119 35 chr2 174889727 174890305 -78366278 - L1ME4a LINE L1 -177 5944 5318 756 188 87 97 chr2 174890765 174891063 -78365520 - MER39 LTR ERV1 0 707 413 255 172 0 78 chr2 174891099 174891163 -78365420 - MER39 LTR ERV1 -425 282 224 2291 92 3 3 chr2 174891938 174892233 -78364350 + AluSg SINE Alu 3 297 -13 189 107 0 0 chr2 174893250 174893278 -78363305 + (TTG)n Simple_repeat Simple_repeat 2 29 0 384 158 20 10 chr2 174893294 174893395 -78363188 + CT-rich Low_complexity Low_complexity 1 102 0 23 54 0 0 chr2 174895737 174895774 -78360809 + AT_rich Low_complexity Low_complexity 1 37 0 2095 151 0 6 chr2 174895803 174896115 -78360468 - AluSx SINE Alu -2 310 1 1231 214 146 18 chr2 174896772 174897199 -78359384 - Charlie1 DNA MER1_type -6 2755 3 244 267 93 12 chr2 174897813 174897899 -78358684 - MIR3 SINE MIR -52 156 64 574 322 29 5 chr2 174898866 174899071 -78357512 - MIR SINE MIR -32 230 21 250 205 222 68 chr2 174899641 174899758 -78356825 - MLT1D LTR MaLR -370 135 1 557 203 23 23 chr2 174899758 174899891 -78356692 - MLT1D-int LTR MaLR 0 1371 1239 240 208 21 125 chr2 174899900 174899996 -78356587 - MLT1D-int LTR MaLR -107 1264 1179 1044 292 32 3 chr2 174900006 174900345 -78356238 - HsTC2 DNA Tc2 -1057 841 493 2063 114 4 4 chr2 174900389 174900669 -78355914 + AluSx SINE Alu 1 280 -32 289 234 194 0 chr2 174900968 174901092 -78355491 - L1ME4a LINE L1 -244 5877 5730 411 258 66 46 chr2 174902766 174902917 -78353666 - MIR SINE MIR -96 166 13 861 279 41 0 chr2 174903146 174903378 -78353205 - MIR SINE MIR -4 258 17 385 280 76 8 chr2 174903378 174903510 -78353073 + MIR SINE MIR 2 142 -120 555 253 169 0 chr2 174905153 174905319 -78351264 - MIR SINE MIR -2 260 67 1546 78 50 0 chr2 174905594 174905813 -78350770 - MER30 DNA MER1_type 0 230 1 243 355 81 16 chr2 174905869 174905993 -78350590 - MIR SINE MIR -73 189 58 476 271 111 17 chr2 174907968 174908149 -78348434 - MIR SINE MIR 0 262 65 212 167 21 0 chr2 174908176 174908224 -78348359 + GA-rich Low_complexity Low_complexity 3 51 0 431 335 57 26 chr2 174908235 174908429 -78348154 - MIR SINE MIR -35 227 28 1503 138 6 106 chr2 174908904 174909216 -78347367 + AluY SINE Alu 1 281 -30 416 307 178 5 chr2 174909455 174909657 -78346926 - MIR SINE MIR -11 251 15 242 343 0 0 chr2 174909665 174909735 -78346848 + L3 LINE CR1 522 591 -986 534 335 55 99 chr2 174909740 174910233 -78346350 + L3 LINE CR1 1070 1540 -37 183 237 75 75 chr2 174911937 174912030 -78344553 + L2 LINE L2 3221 3313 0 1634 187 0 27 chr2 174912093 174912434 -78344149 + AluJo SINE Alu 1 312 0 23 54 0 0 chr2 174912987 174913024 -78343559 + AT_rich Low_complexity Low_complexity 1 37 0 241 211 26 66 chr2 174913227 174913303 -78343280 + MLT1K LTR MaLR 176 248 -340 183 341 57 11 chr2 174913641 174913729 -78342854 - L2 LINE L2 -51 3262 3171 744 192 11 45 chr2 174913729 174913906 -78342677 + MER97b DNA MER1_type? 9 179 -874 558 284 138 31 chr2 174915263 174915848 -78340735 - L1ME3A LINE L1 -219 6020 5373 470 293 46 42 chr2 174915899 174916182 -78340401 - L1ME3A LINE L1 -2792 3423 3140 560 293 113 32 chr2 174916245 174916875 -78339708 - L1MEd LINE L1 -3199 3016 2315 2222 91 14 0 chr2 174916875 174917172 -78339411 - AluSq SINE Alu -12 301 1 560 293 113 32 chr2 174917172 174917476 -78339107 - L1MEd LINE L1 -3900 2315 2037 326 282 109 39 chr2 174917802 174918320 -78338263 - L1MEd LINE L1 -865 1711 1056 277 254 0 0 chr2 174921179 174921238 -78335345 - L2 LINE L2 -2 3270 3212 180 0 0 0 chr2 174923019 174923039 -78333544 + (A)n Simple_repeat Simple_repeat 1 20 0 1225 202 18 0 chr2 174923221 174923439 -78333144 - MER58A DNA MER1_type -2 222 1 206 205 0 0 chr2 174924854 174924893 -78331690 + C-rich Low_complexity Low_complexity 1 39 0 386 291 63 32 chr2 174926599 174926757 -78329826 - MER5A DNA MER1_type 0 189 27 23 0 0 0 chr2 174927113 174927136 -78329447 + AT_rich Low_complexity Low_complexity 1 23 0 1554 194 0 29 chr2 174927970 174928280 -78328303 + AluJo SINE Alu 1 301 -11 291 322 17 17 chr2 174929261 174929379 -78327204 + MIR SINE MIR 39 156 -106 267 210 37 37 chr2 174929727 174929808 -78326775 + L1PB4 LINE L1 6062 6142 -14 195 278 19 0 chr2 174931564 174931618 -78324965 + MIR SINE MIR 103 158 -50 181 267 33 17 chr2 174931721 174931781 -78324802 + MIR SINE MIR 188 248 -14 201 286 100 14 chr2 174934198 174934268 -78322315 + L2 LINE L2 3229 3304 -9 22 0 0 0 chr2 174934859 174934881 -78321702 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr2 174935391 174935428 -78321155 + AT_rich Low_complexity Low_complexity 1 37 0 1097 149 6 0 chr2 174935828 174935996 -78320587 + AluSg/x SINE Alu 135 303 -9 8213 110 32 5 chr2 174938661 174939924 -78316659 - HSMAR2 DNA Mariner -2 1300 4 2176 166 126 18 chr2 174940079 174940525 -78316058 - MLT2B1 LTR ERVL -26 494 1 2587 216 52 70 chr2 174941699 174942382 -78314201 - L1ME1 LINE L1 -9 6157 5463 216 0 0 0 chr2 174942382 174942406 -78314177 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 954 174 0 0 chr2 174942406 174942555 -78314028 - FRAM SINE Alu -17 149 1 2587 216 52 70 chr2 174942555 174943033 -78313550 - L1ME1 LINE L1 -701 5465 5023 401 258 113 38 chr2 174943296 174943509 -78313074 + MIR SINE MIR 4 232 -30 1887 89 96 31 chr2 174943592 174943883 -78312700 + AluSx SINE Alu 1 310 -2 644 324 42 13 chr2 174944579 174944817 -78311766 - MIR SINE MIR -13 249 5 218 159 58 43 chr2 174945521 174945590 -78310993 + (TATATG)n Simple_repeat Simple_repeat 2 71 0 2570 71 0 0 chr2 174946770 174947080 -78309503 - AluSg SINE Alu 0 310 1 335 298 135 37 chr2 174947137 174947573 -78309010 + L1ME4a LINE L1 5371 5849 -272 2346 97 0 0 chr2 174947573 174947872 -78308711 + AluSg SINE Alu 1 299 -11 342 0 0 0 chr2 174948325 174948363 -78308220 + (CA)n Simple_repeat Simple_repeat 1 38 0 223 324 137 6 chr2 174948645 174948827 -78307756 + MIR SINE MIR 41 246 -16 2259 99 0 3 chr2 174949638 174949932 -78306651 - AluSx SINE Alu -19 293 1 1087 171 32 23 chr2 174950123 174950340 -78306243 + MER20 DNA MER1_type 1 219 0 23 33 0 0 chr2 174950674 174950704 -78305879 + AT_rich Low_complexity Low_complexity 1 30 0 764 174 7 0 chr2 174953142 174953286 -78303297 + L1MB5 LINE L1 6029 6173 -1 2077 142 3 3 chr2 174954017 174954326 -78302257 - AluSx SINE Alu -3 309 1 343 286 31 8 chr2 174956767 174956934 -78299649 + L1ME LINE L1 5602 5777 -346 266 363 18 0 chr2 174958505 174958618 -78297965 + MIR SINE MIR 88 202 -60 409 241 32 91 chr2 174959079 174959207 -78297376 - MER5B DNA MER1_type -1 177 62 183 42 0 0 chr2 174959207 174959231 -78297352 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 409 241 32 91 chr2 174959231 174959289 -78297294 - MER5B DNA MER1_type -116 62 2 502 286 101 0 chr2 174959432 174959600 -78296983 + MIR SINE MIR 20 204 -58 3590 107 23 21 chr2 174960486 174961011 -78295572 - MER1A DNA MER1_type 0 527 2 545 320 68 19 chr2 174961585 174961791 -78294792 + MIR SINE MIR 17 232 -30 209 227 0 0 chr2 174961817 174961861 -78294722 + (TAA)n Simple_repeat Simple_repeat 3 46 0 216 0 0 0 chr2 174962321 174962345 -78294238 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 962 194 68 10 chr2 174963348 174963554 -78293029 - MIR SINE MIR -7 255 38 204 457 36 7 chr2 174964548 174964688 -78291895 - L2 LINE L2 -6 3266 3123 238 387 31 40 chr2 174964887 174965112 -78291471 - L2 LINE L2 -493 2821 2599 23 0 0 0 chr2 174965143 174965166 -78291417 + AT_rich Low_complexity Low_complexity 1 23 0 340 294 89 33 chr2 174965284 174965464 -78291119 - MLT1L LTR MaLR -2 613 424 286 271 74 0 chr2 174965557 174965679 -78290904 - MLT1L LTR MaLR -339 276 146 2018 131 3 13 chr2 174968753 174969058 -78287525 + AluSx SINE Alu 1 302 -10 6216 82 14 0 chr2 174969253 174969987 -78286596 - L1PA11 LINE L1 -2 6172 5450 216 0 0 0 chr2 174969987 174970011 -78286572 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2173 100 14 0 chr2 174970011 174970290 -78286293 - AluY SINE Alu -28 283 1 6216 82 14 0 chr2 174970290 174971066 -78285517 - L1PA11 LINE L1 -723 5451 4657 243 279 16 0 chr2 174971233 174971294 -78285289 + L2 LINE L2 3245 3306 -7 1455 132 12 16 chr2 174971477 174971728 -78284855 - L1PB3 LINE L1 0 6154 5905 503 286 8 15 chr2 174972272 174972405 -78284178 + L2 LINE L2 3178 3309 -4 21 57 0 0 chr2 174974690 174974725 -78281858 + AT_rich Low_complexity Low_complexity 1 35 0 363 23 0 0 chr2 174975365 174975409 -78281174 + (CA)n Simple_repeat Simple_repeat 2 45 0 2003 118 21 0 chr2 174976297 174976577 -78280006 - AluSx SINE Alu -26 286 1 37218 38 9 0 chr2 174976614 174982169 -78274414 - L1PA4 LINE L1 0 6155 552 2041 120 17 3 chr2 174982624 174982915 -78273668 - AluSx SINE Alu -15 297 3 801 231 18 10 chr2 174982917 174983120 -78273463 - L1ME1 LINE L1 -57 6109 5920 688 183 7 33 chr2 174983120 174983273 -78273310 - AluY SINE Alu -30 281 133 431 299 0 0 chr2 174983572 174983669 -78272914 + MER81 DNA DNA 18 114 0 847 153 136 0 chr2 174983670 174983846 -78272737 - Cheshire DNA MER1_type -1392 1028 829 1692 169 38 0 chr2 174983847 174984137 -78272446 + AluSx SINE Alu 11 311 -1 315 273 182 71 chr2 174984212 174984387 -78272196 + L2 LINE L2 3013 3226 -87 1950 138 0 17 chr2 174984387 174984683 -78271900 + AluSx SINE Alu 4 294 -18 315 273 182 71 chr2 174984683 174984760 -78271823 + L2 LINE L2 3226 3293 -20 1335 128 0 14 chr2 174984988 174985199 -78271384 - AluY SINE Alu -101 210 3 21 0 0 0 chr2 174985291 174985312 -78271271 + AT_rich Low_complexity Low_complexity 1 21 0 1814 96 4 0 chr2 174985456 174985695 -78270888 - AluSx SINE Alu -70 242 3 646 213 115 51 chr2 174985941 174986366 -78270217 + MLT1F1 LTR MaLR 68 403 -6 29231 49 10 0 chr2 174986734 174990537 -78266046 - L1P LINE L1 -2302 3844 3 207 154 0 0 chr2 174993059 174993092 -78263491 + (CA)n Simple_repeat Simple_repeat 2 35 0 192 40 0 0 chr2 174993092 174993117 -78263466 + (CCCCCA)n Simple_repeat Simple_repeat 3 27 0 2020 126 10 0 chr2 174994591 174994884 -78261699 + AluY SINE Alu 1 296 -15 447 266 49 49 chr2 174994966 174995150 -78261433 + MER63A DNA MER1_type 27 210 0 553 286 18 12 chr2 174995151 174995322 -78261261 + LTR16A LTR ERVL 239 410 -40 265 303 101 23 chr2 174997255 174997453 -78259130 + MIR SINE MIR 42 262 0 447 252 133 0 chr2 174997456 174997599 -78258984 - MIR SINE MIR 0 262 101 228 337 21 21 chr2 174998091 174998186 -78258397 + MIR SINE MIR 58 152 -56 521 256 26 112 chr2 174998258 174998571 -78258012 + MER102b DNA MER1_type 53 338 -3 301 104 21 0 chr2 174999114 174999162 -78257421 - L1PA10 LINE L1 -3 6165 6117 338 316 45 38 chr2 174999623 174999756 -78256827 + MIR3 SINE MIR 9 142 -66 345 250 87 58 chr2 175000272 175000444 -78256139 - L2 LINE L2 -92 3221 3045 725 273 67 64 chr2 175000477 175000836 -78255747 + MLT1I LTR MaLR 44 403 -6 2390 99 7 0 chr2 175001542 175001845 -78254738 - AluSq SINE Alu -8 305 1 204 243 252 0 chr2 175002130 175002233 -78254350 - MIR SINE MIR -114 148 20 501 286 12 30 chr2 175002987 175003155 -78253428 + MLT1J1 LTR MaLR 1 165 -281 290 344 85 0 chr2 175003208 175003397 -78253186 + MLT1J2 LTR MaLR 239 443 -7 265 298 124 16 chr2 175003735 175003856 -78252727 - L2 LINE L2 -5 3267 3134 27 62 0 0 chr2 175003956 175004004 -78252579 + AT_rich Low_complexity Low_complexity 1 48 0 346 332 159 60 chr2 175004185 175004637 -78251946 - L2 LINE L2 -339 2975 2479 228 257 67 57 chr2 175004587 175004692 -78251891 - MIR3 SINE MIR -100 108 3 * 551 284 103 70 chr2 175004847 175005131 -78251452 - L2 LINE L2 -840 2474 2176 2408 62 3 0 chr2 175005131 175005421 -78251162 + AluY SINE Alu 21 311 0 551 284 103 70 chr2 175005421 175005477 -78251106 - L2 LINE L2 -1138 2176 2123 262 164 15 30 chr2 175005497 175005544 -78251039 - MLT2B1 LTR ERVL -4 516 469 276 100 0 0 chr2 175005544 175005584 -78250999 + (TG)n Simple_repeat Simple_repeat 2 41 0 262 164 15 30 chr2 175005584 175005603 -78250980 - MLT2B1 LTR ERVL -51 469 451 1174 211 78 19 chr2 175006770 175007092 -78249491 - MER2 DNA MER2_type -1 343 3 514 269 96 18 chr2 175008770 175008999 -78247584 - MIR SINE MIR 0 262 19 2299 106 0 6 chr2 175009306 175009618 -78246965 + AluSg SINE Alu 1 310 0 304 224 0 0 chr2 175012258 175012325 -78244258 + MER116 DNA Mariner 11 77 -3 1822 152 0 0 chr2 175014703 175014966 -78241617 + AluSx SINE Alu 32 294 -18 42444 33 3 1 chr2 175015148 175021295 -78235288 + L1PA3 LINE L1 2 6155 0 21 0 0 0 chr2 175022011 175022032 -78234551 + AT_rich Low_complexity Low_complexity 1 21 0 28 48 0 0 chr2 175022655 175022697 -78233886 + AT_rich Low_complexity Low_complexity 1 42 0 1791 150 8 4 chr2 175022697 175022963 -78233620 + AluJb SINE Alu 1 267 -45 296 268 92 20 chr2 175023102 175023200 -78233383 - MIR SINE MIR -101 107 2 13748 199 40 11 chr2 175024344 175029711 -78226872 + L1PB1 LINE L1 6 5748 -1119 2480 46 0 10 chr2 175029711 175030013 -78226570 + AluY SINE Alu 1 299 -12 13748 199 40 11 chr2 175030013 175030783 -78225800 + L1PB1 LINE L1 5748 6494 -373 1984 111 0 0 chr2 175030785 175031073 -78225510 + L1PB1 LINE L1 6572 6859 -8 286 286 36 6 chr2 175031089 175031257 -78225326 + L1ME4a LINE L1 5938 6110 -11 249 220 0 0 chr2 175031627 175031686 -78224897 - MER103 DNA DNA -75 91 33 327 49 0 0 chr2 175032573 175032614 -78223969 + (TG)n Simple_repeat Simple_repeat 1 41 0 189 412 0 0 chr2 175033333 175033430 -78223153 + L2 LINE L2 2878 2974 -298 252 343 0 0 chr2 175034724 175034797 -78221786 - LTR67 LTR ERVL -369 188 116 204 167 0 0 chr2 175034920 175034956 -78221627 - MIR SINE MIR -164 98 63 521 249 77 50 chr2 175035424 175035605 -78220978 + MIR SINE MIR 47 232 -30 180 0 0 0 chr2 175038448 175038468 -78218115 + (A)n Simple_repeat Simple_repeat 1 20 0 307 273 60 54 chr2 175038624 175038790 -78217793 - MIR SINE MIR -56 206 36 1202 179 212 0 chr2 175041158 175041460 -78215123 + MER47A DNA MER2_type 1 366 0 324 243 195 24 chr2 175041709 175041878 -78214705 + L2 LINE L2 3005 3202 -111 190 286 18 0 chr2 175041961 175042017 -78214566 + L2 LINE L2 3215 3271 -1 3202 157 0 4 chr2 175042208 175042725 -78213858 - MLT2B1 LTR ERVL -5 515 1 402 115 0 0 chr2 175044073 175044134 -78212449 + (TG)n Simple_repeat Simple_repeat 2 62 0 1797 153 0 37 chr2 175044373 175044668 -78211915 + AluJb SINE Alu 1 284 -28 459 250 29 0 chr2 175044807 175044911 -78211672 + MIR SINE MIR 69 175 -87 2174 109 20 3 chr2 175045220 175045523 -78211060 + AluSx SINE Alu 1 308 -4 2383 59 0 3 chr2 175045604 175045891 -78210692 + AluY SINE Alu 1 286 -25 205 282 90 98 chr2 175046035 175046269 -78210314 + L2 LINE L2 2831 3062 -210 235 278 56 0 chr2 175046302 175046374 -78210209 + MER91C DNA MER1_type 49 124 -16 2500 48 0 0 chr2 175047030 175047320 -78209263 - AluY SINE Alu -21 290 1 22 0 0 0 chr2 175048582 175048604 -78207979 + AT_rich Low_complexity Low_complexity 1 22 0 228 111 0 0 chr2 175050796 175050832 -78205751 + (T)n Simple_repeat Simple_repeat 1 36 0 284 305 62 16 chr2 175051238 175051366 -78205217 + MIR SINE MIR 48 181 -81 2736 23 0 3 chr2 175051993 175052303 -78204280 - AluY SINE Alu -2 309 1 2452 90 41 3 chr2 175054744 175055109 -78201474 - L1PA11 LINE L1 -1 6173 5795 1765 142 11 3 chr2 175055303 175055620 -78200963 + AluSx SINE Alu 1 319 0 561 252 136 0 chr2 175055620 175055775 -78200808 + MER5A DNA MER1_type 14 189 0 643 243 120 26 chr2 175055783 175056050 -78200533 + MER58D DNA MER1_type 1 292 -94 2397 38 10 0 chr2 175056355 175056644 -78199939 - AluY SINE Alu -19 292 1 374 214 67 0 chr2 175056644 175056733 -78199850 + MER58D DNA MER1_type 292 386 0 21 0 0 0 chr2 175056925 175056946 -78199637 + AT_rich Low_complexity Low_complexity 1 21 0 405 234 256 7 chr2 175057744 175057881 -78198702 - MIR SINE MIR -77 185 15 850 157 71 15 chr2 175058009 175058206 -78198377 - L1ME1 LINE L1 -3 6163 5956 277 326 245 14 chr2 175058998 175059145 -78197438 - MER5A DNA MER1_type 0 189 9 1625 130 70 30 chr2 175059192 175059492 -78197091 - AluJb SINE Alu 0 312 1 2110 132 3 0 chr2 175060110 175060405 -78196178 + AluSx SINE Alu 1 296 -16 195 69 0 0 chr2 175060459 175060488 -78196095 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 310 318 32 39 chr2 175060540 175060694 -78195889 - MIR SINE MIR -108 154 2 204 40 0 0 chr2 175061951 175061976 -78194607 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 181 279 0 98 chr2 175062611 175062672 -78193911 + L2 LINE L2 1128 1182 -2132 207 304 69 10 chr2 175063146 175063248 -78193335 + L2 LINE L2 2357 2464 -850 728 323 90 16 chr2 175063330 175063998 -78192585 + L2 LINE L2 2605 3313 0 259 303 30 10 chr2 175064180 175064279 -78192304 - L3 LINE CR1 -84 1493 1393 206 274 265 29 chr2 175064372 175064576 -78192007 + L2 LINE L2 2726 2977 -337 2425 91 0 17 chr2 175065329 175065681 -78190902 - L1PB1 LINE L1 0 6151 5806 252 143 0 0 chr2 175065690 175065732 -78190851 + (TA)n Simple_repeat Simple_repeat 2 43 0 1245 243 10 18 chr2 175065732 175066119 -78190464 + L1P LINE L1 3267 3650 -2496 188 70 116 0 chr2 175066126 175066212 -78190371 + (TA)n Simple_repeat Simple_repeat 1 96 0 316 200 0 0 chr2 175066227 175066287 -78190296 + L1MC4 LINE L1 6644 6703 -1339 247 143 0 0 chr2 175066311 175066360 -78190223 - LTR66 LTR ERVL -171 439 391 5521 167 8 4 chr2 175066367 175067720 -78188863 - L1P5 LINE L1 -383 5768 4406 453 19 0 0 chr2 175067720 175067774 -78188809 + (GTATG)n Simple_repeat Simple_repeat 2 55 0 5521 167 8 4 chr2 175067774 175068089 -78188494 - L1P5 LINE L1 -1745 4406 4094 8422 174 48 2 chr2 175068093 175071512 -78185071 - L1PBa LINE L1 -2430 4432 722 757 69 0 10 chr2 175071612 175071714 -78184869 + AluSp/q SINE Alu 206 306 -7 2402 149 24 4 chr2 175072063 175072513 -78184070 - Tigger4(Zombi) DNA MER2_type 0 2731 2273 473 148 86 0 chr2 175072511 175072592 -78183991 - Tigger4(Zombi) DNA MER2_type -2643 88 1 * 2112 101 3 11 chr2 175072592 175072900 -78183683 - AluSx SINE Alu 0 306 1 230 170 0 64 chr2 175073941 175073988 -78182595 - MIR3 SINE MIR -15 193 150 256 331 250 0 chr2 175074163 175074287 -78182296 - MIR3 SINE MIR -51 157 3 342 311 37 50 chr2 175074594 175074755 -78181828 - L2 LINE L2 -48 3224 3066 434 297 34 38 chr2 175074952 175075215 -78181368 + L1M4 LINE L1 28 289 -6570 306 293 16 16 chr2 175075558 175075681 -78180902 + L1M4 LINE L1 1066 1188 -5667 969 261 169 17 chr2 175075729 175076762 -78179821 + L1M4 LINE L1 1187 2527 -4611 380 125 111 0 chr2 175076775 175076847 -78179736 + MADE1 DNA Mariner 1 80 0 453 238 68 68 chr2 175077131 175077337 -78179246 + L1M4 LINE L1 5637 5842 -1115 457 254 76 65 chr2 175077605 175077680 -78178903 - MLT1K LTR MaLR -27 561 488 1727 181 3 0 chr2 175077680 175077968 -78178615 + AluJb SINE Alu 1 289 -23 457 254 76 65 chr2 175077968 175078167 -78178416 - MLT1K LTR MaLR -100 488 284 472 254 168 5 chr2 175078205 175078390 -78178193 - MLT1K LTR MaLR -372 216 2 183 42 0 0 chr2 175078519 175078543 -78178040 + (GA)n Simple_repeat Simple_repeat 1 24 0 2532 65 0 0 chr2 175079244 175079551 -78177032 + AluY SINE Alu 1 307 -4 486 260 77 30 chr2 175080139 175080308 -78176275 - MIR SINE MIR -79 183 7 259 306 134 37 chr2 175081043 175081177 -78175406 + MIR SINE MIR 52 198 -64 304 259 35 12 chr2 175081212 175081297 -78175286 + L2 LINE L2 3227 3313 0 472 300 17 55 chr2 175081470 175081760 -78174823 - HAL1 LINE L1 -701 1806 1528 358 266 35 0 chr2 175081774 175081887 -78174696 - L1ME4a LINE L1 -31 6090 5974 203 229 16 0 chr2 175082872 175082933 -78173650 + GA-rich Low_complexity Low_complexity 2 63 0 1096 183 11 61 chr2 175083065 175083327 -78173256 - MLT1D LTR MaLR -7 498 250 1866 154 7 13 chr2 175083328 175083627 -78172956 + AluSx SINE Alu 1 297 -15 2714 123 14 0 chr2 175083646 175084060 -78172523 + MER57B LTR ERV1 1 420 -14 297 100 0 0 chr2 175084061 175084111 -78172472 + MER57B LTR ERV1 385 434 0 528 208 28 111 chr2 175084145 175084361 -78172222 - MLT1D LTR MaLR -307 198 1 5655 167 16 30 chr2 175084660 175085732 -78170851 - L1MC1 LINE L1 0 6333 5248 243 0 0 0 chr2 175085732 175085759 -78170824 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1607 164 7 7 chr2 175085761 175086035 -78170548 - AluSx SINE Alu -35 277 4 5655 167 16 30 chr2 175086035 175086308 -78170275 - L1MC1 LINE L1 -1086 5247 5024 234 114 91 0 chr2 175086328 175086372 -78170211 - L1MC1 LINE L1 -1198 4948 4901 2746 133 24 0 chr2 175086420 175086885 -78169698 - L1MB2 LINE L1 -3 6168 5693 738 191 11 39 chr2 175088698 175088876 -78167707 + L1PA16 LINE L1 5989 6161 -5 945 154 74 12 chr2 175088883 175089045 -78167538 + FAM SINE Alu 3 174 -1 2398 96 0 10 chr2 175089057 175089369 -78167214 + AluSx SINE Alu 1 309 -3 200 282 223 0 chr2 175090184 175090287 -78166296 + L2 LINE L2 2934 3059 -213 948 262 0 0 chr2 175090489 175090676 -78165907 + MER5A DNA MER1_type 1 187 -2 269 229 108 117 chr2 175090715 175090955 -78165628 - MER102b DNA MER1_type 0 341 104 2231 102 7 0 chr2 175092233 175092527 -78164056 - AluSq SINE Alu -17 296 1 344 247 62 12 chr2 175092614 175092776 -78163807 - L1ME4a LINE L1 -2 6119 5950 7758 106 11 15 chr2 175092823 175092876 -78163707 + HSMAR2 DNA Mariner 2 54 -1248 2043 138 10 0 chr2 175092876 175093180 -78163403 + AluSx SINE Alu 1 307 -5 7758 106 11 15 chr2 175093180 175094332 -78162251 + HSMAR2 DNA Mariner 54 1202 -100 952 159 51 0 chr2 175094345 175094502 -78162081 + FRAM SINE Alu 1 165 -1 412 347 56 30 chr2 175094502 175094839 -78161744 + L1MC4a LINE L1 2253 2598 -3548 22 35 0 0 chr2 175094896 175094925 -78161658 + AT_rich Low_complexity Low_complexity 1 29 0 444 300 99 60 chr2 175094962 175095351 -78161232 + L1MC4a LINE L1 2783 3155 -2991 2209 106 20 0 chr2 175095351 175095654 -78160929 + AluSq SINE Alu 1 309 -4 444 300 99 60 chr2 175095654 175097223 -78159360 + L1MC4a LINE L1 3155 4837 -1309 2442 62 26 7 chr2 175097223 175097528 -78159055 + AluY SINE Alu 1 311 0 444 300 99 60 chr2 175097528 175097719 -78158864 + L1MC4a LINE L1 4837 5019 -1127 1400 189 57 7 chr2 175097743 175098040 -78158543 + AluJo SINE Alu 1 312 0 431 207 69 52 chr2 175098179 175098295 -78158288 + FLAM_C SINE Alu 2 119 -14 180 0 0 0 chr2 175098296 175098316 -78158267 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 647 219 8 122 chr2 175098337 175098396 -78158187 + MIR SINE MIR 19 83 -179 2580 33 10 0 chr2 175098396 175098699 -78157884 - AluY SINE Alu -5 306 1 647 219 8 122 chr2 175098699 175098886 -78157697 + MIR SINE MIR 83 237 -25 1070 296 88 33 chr2 175098931 175099441 -78157142 + L1MC4a LINE L1 5406 5943 -1865 662 280 78 67 chr2 175099582 175099991 -78156592 + LTR16A LTR ERVL 4 450 0 23 54 0 0 chr2 175100034 175100071 -78156512 + AT_rich Low_complexity Low_complexity 1 37 0 388 342 71 58 chr2 175100719 175101664 -78154919 - L2 LINE L2 -460 2854 1898 1552 155 0 0 chr2 175101769 175102001 -78154582 - MSTC LTR MaLR 0 428 197 759 177 8 23 chr2 175102006 175102136 -78154447 - FLAM_A SINE Alu -13 129 2 796 129 103 39 chr2 175102137 175102292 -78154291 - MSTC LTR MaLR -217 211 47 517 183 42 70 chr2 175102392 175102534 -78154049 + MIR SINE MIR 109 246 -16 1746 151 46 3 chr2 175102805 175103090 -78153493 + AluJo SINE Alu 1 297 -15 2449 133 3 0 chr2 175104822 175105175 -78151408 + MER72 LTR ERV1 367 720 -2 396 308 31 15 chr2 175105722 175105852 -78150731 - MIR3 SINE MIR -14 194 63 24 0 0 0 chr2 175105902 175105926 -78150657 + AT_rich Low_complexity Low_complexity 1 24 0 417 167 97 79 chr2 175106162 175106276 -78150307 + MER69A DNA AcHobo 61 176 -1 767 270 58 9 chr2 175106283 175106509 -78150074 + MIR SINE MIR 2 238 -24 581 287 86 24 chr2 175106546 175106755 -78149828 + MIR SINE MIR 4 225 -37 326 236 34 11 chr2 175106802 175106891 -78149692 + MER112 DNA MER1_type 1 91 -169 222 316 110 7 chr2 175109249 175109385 -78147198 - L2 LINE L2 -23 3290 3141 560 276 31 6 chr2 175110133 175110296 -78146287 + MIR SINE MIR 15 181 -81 211 354 43 34 chr2 175110915 175111124 -78145459 + L2 LINE L2 2556 2766 -548 406 254 71 8 chr2 175111219 175111345 -78145238 - Charlie8 DNA MER1_type -1959 458 325 761 242 13 6 chr2 175111561 175111718 -78144865 + Charlie1 DNA MER1_type 2 159 -2602 395 277 39 15 chr2 175111830 175111960 -78144623 - L2 LINE L2 -3 3269 3137 226 297 144 8 chr2 175112271 175112389 -78144194 - MER94 DNA DNA 0 134 1 2850 127 30 5 chr2 175112452 175112853 -78143730 + LTR57 LTR ERVL 1 411 0 747 170 64 29 chr2 175112893 175113064 -78143519 + MLT1B LTR MaLR 1 177 -213 1838 113 35 0 chr2 175113066 175113348 -78143235 + AluSx SINE Alu 1 292 -20 2215 237 80 9 chr2 175113683 175114334 -78142249 - L1PBa LINE L1 -6161 702 6 226 315 45 0 chr2 175114430 175114519 -78142064 + MER102a DNA MER1_type 205 297 -33 405 308 36 15 chr2 175114563 175114775 -78141808 - L2 LINE L2 -267 3005 2791 304 305 105 0 chr2 175114970 175115075 -78141508 - L2 LINE L2 -557 2757 2642 1747 190 76 11 chr2 175115149 175115518 -78141065 - L1MB7 LINE L1 -17 6167 5775 * 1914 235 35 26 chr2 175115516 175116197 -78140386 - L1M4 LINE L1 -2775 3869 3183 * 5431 202 30 58 chr2 175116194 175116929 -78139654 - L1M4 LINE L1 -5223 1319 565 2284 97 10 3 chr2 175116929 175117227 -78139356 - AluSq SINE Alu -13 300 1 5431 202 30 58 chr2 175117227 175117798 -78138785 - L1M4 LINE L1 -5977 565 48 1979 145 3 22 chr2 175117798 175118116 -78138467 - AluJo SINE Alu 0 312 1 5431 202 30 58 chr2 175118116 175118151 -78138432 - L1M4 LINE L1 -6494 48 14 214 324 69 10 chr2 175118220 175118322 -78138261 - L2 LINE L2 -5 3267 3160 1246 84 137 4 chr2 175119023 175119285 -78137298 + AluSp SINE Alu 1 297 -6 1660 161 0 4 chr2 175119511 175119772 -78136811 + AluSx SINE Alu 13 272 -40 417 129 32 11 chr2 175119778 175119871 -78136712 + GA-rich Low_complexity Low_complexity 1 95 0 1199 32 5 43 chr2 175119872 175120059 -78136524 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2001 181 38 107 chr2 175120086 175120645 -78135938 + MLT2B1 LTR ERVL 1 520 0 2084 113 0 10 chr2 175120677 175120968 -78135615 + AluSg SINE Alu 1 288 -22 313 321 30 30 chr2 175121648 175121813 -78134770 + MIR3 SINE MIR 3 167 -41 634 198 0 0 chr2 175121930 175122041 -78134542 + FLAM_A SINE Alu 12 122 -20 185 65 32 0 chr2 175122667 175122698 -78133885 + (TATAA)n Simple_repeat Simple_repeat 4 35 0 284 229 145 0 chr2 175124163 175124246 -78132337 + MIR SINE MIR 168 262 0 2552 74 36 3 chr2 175125420 175125757 -78130826 - THE1A LTR MaLR 0 355 8 810 281 122 47 chr2 175125808 175126274 -78130309 - L2 LINE L2 0 3313 2813 336 260 135 0 chr2 175127217 175127313 -78129270 + MER117 DNA MER1_type 42 150 -47 3050 90 59 5 chr2 175127418 175127839 -78128744 - MLT2A1 LTR ERVL 0 444 1 1393 137 0 31 chr2 175127886 175128113 -78128470 + AluJb SINE Alu 85 304 -8 498 259 168 11 chr2 175128880 175129065 -78127518 + MIR SINE MIR 49 262 0 705 177 0 0 chr2 175129241 175129344 -78127239 + MER72 LTR ERV1 5 107 -615 3766 152 6 24 chr2 175129344 175129982 -78126601 + MER41B LTR ERV1 1 627 -8 1018 152 127 120 chr2 175129989 175130272 -78126311 + MER72 LTR ERV1 104 388 -334 2363 89 0 0 chr2 175131339 175131631 -78124952 + AluSx SINE Alu 1 292 -20 4560 148 80 59 chr2 175132250 175132705 -78123878 - L1MA9 LINE L1 -25 6287 5843 1613 130 0 55 chr2 175132705 175132958 -78123625 + AluJb SINE Alu 44 282 -30 4560 148 80 59 chr2 175132958 175134199 -78122384 - L1MA9 LINE L1 -469 5843 4566 319 313 17 62 chr2 175134757 175134936 -78121647 + MIR3 SINE MIR 15 185 -23 22 0 0 0 chr2 175136479 175136501 -78120082 + AT_rich Low_complexity Low_complexity 1 22 0 24 53 0 0 chr2 175137042 175137080 -78119503 + AT_rich Low_complexity Low_complexity 1 38 0 2218 83 3 26 chr2 175137437 175137739 -78118844 + AluSc SINE Alu 1 295 -14 270 0 0 0 chr2 175137828 175137858 -78118725 + (CA)n Simple_repeat Simple_repeat 2 31 0 * 297 0 0 0 chr2 175137857 175137890 -78118693 + (TC)n Simple_repeat Simple_repeat 1 33 0 656 209 12 86 chr2 175139282 175139526 -78117057 - Charlie1 DNA MER1_type 0 2761 2536 5095 181 88 58 chr2 175139528 175140265 -78116318 - Charlie1a DNA MER1_type -1420 1341 546 2193 79 7 24 chr2 175140265 175140588 -78115995 - AluY SINE Alu 0 318 1 5095 181 88 58 chr2 175140588 175141147 -78115436 - Charlie1a DNA MER1_type -2215 546 5 2534 181 47 30 chr2 175141159 175141691 -78114892 + MER34 LTR ERV1 1 541 -1 884 202 16 16 chr2 175142015 175142203 -78114380 - MER5A DNA MER1_type 0 189 2 393 261 25 8 chr2 175142898 175143017 -78113566 + MER5B DNA MER1_type 2 122 -56 231 299 145 0 chr2 175143031 175143148 -78113435 - MIR SINE MIR -118 144 11 210 143 39 143 chr2 175143172 175143249 -78113334 + MER5B DNA MER1_type 108 176 -2 21 57 0 0 chr2 175146913 175146948 -78109635 + AT_rich Low_complexity Low_complexity 1 35 0 3355 138 25 0 chr2 175148962 175149520 -78107063 - L1PA16 LINE L1 -9 6157 5586 29 0 0 0 chr2 175149963 175149992 -78106591 + AT_rich Low_complexity Low_complexity 1 29 0 801 239 35 63 chr2 175150108 175150363 -78106220 + MIR SINE MIR 2 249 -13 299 352 51 40 chr2 175150366 175150639 -78105944 + L2 LINE L2 2596 2871 -443 1326 259 77 33 chr2 175150792 175151502 -78105081 + L2 LINE L2 2524 3264 -49 2899 107 36 0 chr2 175151772 175152191 -78104392 + MER57B LTR ERV1 1 434 0 4077 123 28 8 chr2 175152191 175152844 -78103739 + MER57B-int LTR ERV1 1 666 -6871 1285 80 0 0 chr2 175152844 175153019 -78103564 + MER57B-int LTR ERV1 793 967 -6570 * 3272 145 41 18 chr2 175153013 175153783 -78102800 + MER57B-int LTR ERV1 648 3585 -4231 583 157 9 17 chr2 175153786 175153901 -78102682 + MER41-int LTR ERV1 1901 2014 -3932 * 844 123 29 0 chr2 175153900 175154038 -78102545 + MER41-int LTR ERV1 2781 2922 -4615 * 13098 101 44 41 chr2 175154030 175156368 -78100215 + MER41-int LTR ERV1 3252 5595 -1942 1762 80 4 0 chr2 175156694 175156919 -78099664 + AluY SINE Alu 1 226 -85 612 304 113 14 chr2 175156919 175157264 -78099319 + LTR16A LTR ERVL 61 439 -11 3095 143 123 29 chr2 175157442 175158106 -78098477 + LTR8A LTR ERV1 1 727 0 2686 147 51 103 chr2 175158914 175159643 -78096940 - LTR8 LTR ERV1 0 691 1 2094 193 58 108 chr2 175159777 175160611 -78095972 - L1ME1 LINE L1 -6 6160 5369 279 160 0 20 chr2 175163712 175163762 -78092821 - MER94 DNA DNA -85 49 1 395 308 9 0 chr2 175164116 175164223 -78092360 + L2 LINE L2 3206 3313 0 1911 105 98 0 chr2 175164357 175164634 -78091949 + AluSp SINE Alu 1 304 -9 342 0 0 0 chr2 175164637 175164675 -78091908 + (GGAA)n Simple_repeat Simple_repeat 3 40 0 289 324 141 62 chr2 175165283 175165688 -78090895 - L2 LINE L2 0 3272 2836 289 324 141 62 chr2 175166529 175166934 -78089649 - L2 LINE L2 0 3272 2836 23 0 0 0 chr2 175168138 175168161 -78088422 + AT_rich Low_complexity Low_complexity 1 23 0 704 251 45 10 chr2 175170315 175170514 -78086069 - MIR SINE MIR -48 214 9 346 260 115 10 chr2 175173148 175173252 -78083331 - L2 LINE L2 0 3313 3199 367 242 9 117 chr2 175174570 175174801 -78081782 - Charlie8 DNA MER1_type -2211 206 1 587 108 0 0 chr2 175176054 175176137 -78080446 + AluJ/FLAM SINE Alu 1 83 -229 568 268 79 9 chr2 175176160 175176388 -78080195 + MLT1L LTR MaLR 368 611 -4 1952 144 3 3 chr2 175177087 175177400 -78079183 - L1MB5 LINE L1 -11 6163 5851 33 35 0 17 chr2 175177759 175177794 -78078789 + AT_rich Low_complexity Low_complexity 1 36 -21 2405 81 0 3 chr2 175177794 175178102 -78078481 - AluSc SINE Alu -2 307 1 33 35 0 17 chr2 175178102 175178124 -78078459 + AT_rich Low_complexity Low_complexity 36 57 0 217 360 103 0 chr2 175178405 175178541 -78078042 + L3 LINE CR1 1326 1475 -102 843 171 61 0 chr2 175178586 175178750 -78077833 + MER45A DNA AcHobo 5 178 0 553 289 89 22 chr2 175180098 175180323 -78076260 - MIR SINE MIR -3 259 20 212 0 36 0 chr2 175181313 175181341 -78075242 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 239 298 35 61 chr2 175181732 175181846 -78074737 + L2 LINE L2 2779 2889 -425 401 336 62 38 chr2 175181889 175182146 -78074437 + L2 LINE L2 3015 3281 -32 2391 90 0 3 chr2 175182146 175182456 -78074127 - AluY SINE Alu -2 309 1 401 336 62 38 chr2 175182456 175182490 -78074093 + L2 LINE L2 3281 3313 0 308 104 0 0 chr2 175183903 175183951 -78072632 + L1MA4 LINE L1 6242 6289 -11 2269 94 20 0 chr2 175185671 175185970 -78070613 - AluSg SINE Alu -5 305 1 2384 87 0 3 chr2 175187145 175187445 -78069138 + AluY SINE Alu 1 299 -12 342 328 8 25 chr2 175187463 175187582 -78069001 - MER5A DNA MER1_type -1 188 72 2089 153 0 3 chr2 175187790 175188103 -78068480 + AluJb SINE Alu 1 312 0 2208 131 0 0 chr2 175189448 175189753 -78066830 - AluSx SINE Alu -7 305 1 211 247 191 22 chr2 175189990 175190079 -78066504 - L2 LINE L2 0 3313 3210 2807 257 114 75 chr2 175191815 175192333 -78064250 - L2 LINE L2 0 3313 2817 1554 160 24 3 chr2 175192333 175192621 -78063962 - L1MB7 LINE L1 -19 6165 5872 2807 257 114 75 chr2 175192621 175193784 -78062799 - L2 LINE L2 -496 2817 1551 256 214 51 82 chr2 175194007 175194105 -78062478 + MIR SINE MIR 107 201 -61 2206 112 0 3 chr2 175195463 175195759 -78060824 + AluSx SINE Alu 1 295 -17 22 35 0 0 chr2 175195883 175195912 -78060671 + AT_rich Low_complexity Low_complexity 1 29 0 436 356 0 0 chr2 175196231 175196363 -78060220 + MIR3 SINE MIR 67 198 -10 1858 131 46 3 chr2 175196637 175196920 -78059663 - AluSq SINE Alu -18 295 1 417 156 0 0 chr2 175198241 175198318 -78058265 + (TG)n Simple_repeat Simple_repeat 1 77 0 274 224 17 0 chr2 175198357 175198415 -78058168 + MIR SINE MIR 203 261 -1 1591 168 71 20 chr2 175198650 175198947 -78057636 + AluJo SINE Alu 1 312 0 2036 147 0 0 chr2 175200383 175200675 -78055908 - AluSx SINE Alu -20 292 1 234 0 0 0 chr2 175200835 175200861 -78055722 + (A)n Simple_repeat Simple_repeat 1 26 0 2182 85 48 7 chr2 175201825 175202119 -78054464 - AluSp SINE Alu -7 306 1 22 0 0 0 chr2 175202119 175202141 -78054442 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr2 175202318 175202355 -78054228 + AT_rich Low_complexity Low_complexity 1 37 0 497 224 155 31 chr2 175205898 175206059 -78050524 + MER5A DNA MER1_type 9 189 0 489 287 41 61 chr2 175206122 175206342 -78050241 - MIR SINE MIR -34 228 16 8143 101 66 12 chr2 175206428 175206669 -78049914 + THE1B-int LTR MaLR 250 477 -1103 2369 78 0 3 chr2 175206669 175206965 -78049618 + AluY SINE Alu 1 295 -16 8143 101 66 12 chr2 175206965 175207986 -78048597 + THE1B-int LTR MaLR 477 1580 0 2395 136 5 19 chr2 175207986 175208355 -78048228 + THE1B LTR MaLR 1 364 0 190 344 0 0 chr2 175209276 175209340 -78047243 + MIR SINE MIR 199 262 0 249 319 168 8 chr2 175209719 175209838 -78046745 - L2 LINE L2 -1 3271 3134 599 319 49 29 chr2 175210118 175210425 -78046158 - MER102b DNA MER1_type -8 333 21 323 184 112 31 chr2 175210706 175210804 -78045779 + MLT1F1 LTR MaLR 413 518 -49 553 327 20 0 chr2 175210814 175211068 -78045515 + MLT1F1-int LTR MaLR 292 550 -821 576 265 82 14 chr2 175212008 175212298 -78044285 + MLT1G LTR MaLR 3 276 -314 288 215 37 56 chr2 175212343 175212450 -78044133 + MLT1G LTR MaLR 453 557 -10 23 33 0 0 chr2 175212932 175212962 -78043621 + AT_rich Low_complexity Low_complexity 1 30 0 1058 230 37 55 chr2 175213645 175214049 -78042534 + MLT2C1 LTR ERVL 1 397 0 1930 92 62 0 chr2 175215948 175216220 -78040363 - AluSp SINE Alu -24 289 1 225 0 0 0 chr2 175216613 175216638 -78039945 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 182 301 24 48 chr2 175216892 175216975 -78039608 + L2 LINE L2 3191 3271 -1 306 0 0 0 chr2 175217472 175217506 -78039077 + (CA)n Simple_repeat Simple_repeat 1 34 0 520 233 104 29 chr2 175218009 175218356 -78038227 - L1MC5 LINE L1 -31 7930 7558 2387 95 40 6 chr2 175219563 175219912 -78036671 - THE1B LTR MaLR 0 364 4 205 278 28 42 chr2 175221655 175221727 -78034856 - MER5A DNA MER1_type -5 184 114 * 228 298 0 18 chr2 175221682 175221739 -78034844 + MER5A DNA MER1_type 44 99 -90 1269 53 0 0 chr2 175221942 175222093 -78034490 - AluY SINE Alu -5 306 156 454 277 134 26 chr2 175222589 175222820 -78033763 + MIR SINE MIR 1 256 -6 313 303 30 0 chr2 175223649 175223748 -78032835 + L2 LINE L2 3146 3247 -25 1575 181 3 35 chr2 175223765 175224080 -78032503 + AluJo SINE Alu 1 305 -7 241 208 21 0 chr2 175224463 175224511 -78032072 + L2 LINE L2 3251 3299 -14 814 254 152 49 chr2 175225069 175225596 -78030987 + MLT1G1 LTR MaLR 7 587 -8 366 297 76 8 chr2 175226627 175226745 -78029838 + MIR3 SINE MIR 12 137 -71 822 131 0 8 chr2 175226765 175226887 -78029696 - FLAM_C SINE Alu -12 121 1 969 87 0 0 chr2 175226897 175227035 -78029548 + L1PA7 LINE L1 5145 5282 -864 5347 49 1 0 chr2 175227035 175227690 -78028893 + L1PA7 LINE L1 5496 6152 -2 2132 134 0 6 chr2 175227779 175228093 -78028490 + AluSx SINE Alu 1 312 0 1364 135 38 19 chr2 175228104 175228371 -78028212 - L1MB8 LINE L1 -12 6166 5895 1584 171 49 17 chr2 175228374 175228718 -78027865 - L1MB8 LINE L1 -411 5767 5413 2512 65 3 7 chr2 175228971 175229280 -78027303 + AluY SINE Alu 1 308 -3 417 305 130 51 chr2 175230246 175230616 -78025967 + L1ME4a LINE L1 5723 6121 0 820 235 138 12 chr2 175231056 175231375 -78025208 + L1MC4a LINE L1 5563 5921 -1887 1139 130 0 0 chr2 175232301 175232455 -78024128 - AluSc SINE Alu -26 283 130 682 287 28 9 chr2 175232510 175232726 -78023857 + MIR SINE MIR 43 262 0 1942 146 0 10 chr2 175232860 175233155 -78023428 + AluJo SINE Alu 1 292 -20 247 253 13 13 chr2 175233156 175233231 -78023352 + (TA)n Simple_repeat Simple_repeat 1 75 0 1971 144 29 10 chr2 175234598 175234904 -78021679 + AluJb SINE Alu 1 312 0 531 309 37 0 chr2 175235238 175235426 -78021157 - MIR SINE MIR -32 230 36 581 279 141 35 chr2 175235644 175236546 -78020037 - L1ME2 LINE L1 -226 5938 4836 1737 190 0 22 chr2 175236546 175236862 -78019721 - AluJo SINE Alu -3 309 1 581 279 141 35 chr2 175236862 175237330 -78019253 - L1ME2 LINE L1 -1328 4836 4419 304 267 118 26 chr2 175237363 175237584 -78018999 - L1ME2 LINE L1 -2678 3468 3224 231 303 156 28 chr2 175237699 175237917 -78018666 - HAL1 LINE L1 -840 1667 1422 1704 143 81 39 chr2 175238623 175238981 -78017602 + THE1C LTR MaLR 3 375 0 182 333 14 0 chr2 175239339 175239411 -78017172 - L3 LINE CR1 -159 1418 1346 276 320 0 20 chr2 175240008 175240108 -78016475 + MER5A DNA MER1_type 35 132 -57 198 286 0 0 chr2 175240777 175240833 -78015750 - MIR SINE MIR -49 213 158 21 0 0 0 chr2 175241555 175241576 -78015007 + AT_rich Low_complexity Low_complexity 1 21 0 1817 132 26 0 chr2 175241934 175242199 -78014384 + AluSx SINE Alu 12 283 -29 695 0 0 40 chr2 175242208 175242307 -78014276 + (GAAA)n Simple_repeat Simple_repeat 2 96 0 1534 167 97 6 chr2 175242919 175243230 -78013353 + MER44D DNA MER2_type 1 609 0 2217 113 0 25 chr2 175243391 175243709 -78012874 - AluSx SINE Alu -1 311 2 1887 200 68 18 chr2 175243772 175244268 -78012315 - Charlie1b DNA MER1_type -1 522 2 271 192 27 0 chr2 175244269 175244342 -78012241 + (TA)n Simple_repeat Simple_repeat 1 75 0 201 279 132 62 chr2 175244385 175244514 -78012069 - MIR SINE MIR -60 202 65 998 255 62 21 chr2 175245700 175246073 -78010510 - L1MC4a LINE L1 -1884 5924 5537 592 284 33 0 chr2 175246138 175246349 -78010234 - Charlie8 DNA MER1_type -2153 264 47 1656 183 13 16 chr2 175246615 175246921 -78009662 - AluJo SINE Alu -7 305 1 207 167 74 19 chr2 175248003 175248057 -78008526 + MIR SINE MIR 100 156 -106 1469 198 119 0 chr2 175248064 175248418 -78008165 + MSTD LTR MaLR 1 396 0 462 316 40 23 chr2 175248420 175248597 -78007986 - MIR SINE MIR -21 241 62 229 322 91 37 chr2 175248762 175249201 -78007382 + L2 LINE L2 2066 2601 -713 278 296 61 0 chr2 175249637 175249735 -78006848 + MIR SINE MIR 70 173 -89 650 254 8 0 chr2 175250053 175250187 -78006396 - MIR3 SINE MIR -1 207 73 244 214 54 0 chr2 175250193 175250249 -78006334 - L2 LINE L2 -3 3310 3252 741 176 0 0 chr2 175250542 175250661 -78005922 + AluJb SINE Alu 2 120 -192 336 301 21 0 chr2 175251267 175251360 -78005223 + (CATA)n Simple_repeat Simple_repeat 4 98 0 262 245 20 20 chr2 175251891 175251989 -78004594 - L1MC4 LINE L1 -16 8026 7929 2255 70 3 3 chr2 175253664 175253949 -78002634 + AluY SINE Alu 1 285 -26 1878 158 45 26 chr2 175255180 175255561 -78001022 + MLT1B LTR MaLR 3 390 0 446 310 19 13 chr2 175257462 175257617 -77998966 + MIR SINE MIR 28 183 -79 202 342 26 26 chr2 175260574 175260691 -77995892 + L3 LINE CR1 268 384 -1193 819 276 103 29 chr2 175261041 175261585 -77994998 + L1ME4a LINE L1 5530 6113 -8 2478 221 98 26 chr2 175262022 175263015 -77993568 + L1ME1 LINE L1 4899 6134 -200 2859 10 0 0 chr2 175263015 175263327 -77993256 + AluYb8 SINE Alu 1 312 -6 2478 221 98 26 chr2 175263327 175263542 -77993041 + L1ME1 LINE L1 6134 6332 -2 366 256 11 0 chr2 175264713 175264803 -77991780 - L2 LINE L2 -45 3268 3178 54 16 0 0 chr2 175264958 175265019 -77991564 + AT_rich Low_complexity Low_complexity 1 61 0 194 226 38 135 chr2 175265165 175265298 -77991285 - MER5A DNA MER1_type -42 147 28 2309 112 0 0 chr2 175266277 175266580 -77990003 - AluSg1 SINE Alu -6 303 1 182 62 31 0 chr2 175268747 175268779 -77987804 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 2193 84 3 14 chr2 175269788 175270104 -77986479 + AluSc SINE Alu 1 313 0 2397 81 0 0 chr2 175271917 175272212 -77984371 - AluY SINE Alu -16 295 1 490 303 41 32 chr2 175273194 175273412 -77983171 + MIR SINE MIR 33 252 -10 2014 183 47 27 chr2 175274045 175274531 -77982052 + MLT1D LTR MaLR 10 505 0 809 146 0 15 chr2 175275323 175275453 -77981130 - FLAM_C SINE Alu -5 128 1 387 286 33 60 chr2 175276855 175277222 -77979361 + L1ME4a LINE L1 5715 6071 -50 231 315 86 9 chr2 175277514 175277636 -77978947 + MIR SINE MIR 5 137 -71 485 380 9 9 chr2 175277948 175278174 -77978409 + MIR SINE MIR 20 245 -17 331 289 125 29 chr2 175278569 175278777 -77977806 + L2 LINE L2 3075 3302 -11 186 230 216 14 chr2 175279850 175279924 -77976659 - L3 LINE CR1 -1384 193 105 190 191 16 32 chr2 175280357 175280420 -77976163 + (TATATG)n Simple_repeat Simple_repeat 5 66 0 2255 121 0 0 chr2 175280886 175281192 -77975391 - AluSx SINE Alu -6 306 1 255 189 0 0 chr2 175281234 175281287 -77975296 + (CA)n Simple_repeat Simple_repeat 1 53 0 3071 269 171 26 chr2 175281307 175282881 -77973702 + L2 LINE L2 1233 3104 -209 2265 218 112 7 chr2 175282881 175283473 -77973110 + MLT1E1 LTR MaLR 1 654 0 3071 269 171 26 chr2 175283473 175283719 -77972864 + L2 LINE L2 3104 3313 0 1176 178 131 42 chr2 175283947 175284284 -77972299 + MLT1A2 LTR MaLR 1 367 -7 956 320 117 48 chr2 175284297 175285043 -77971540 + L3 LINE CR1 314 1110 -467 258 267 114 0 chr2 175285063 175285168 -77971415 + MER103 DNA DNA 1 117 -49 183 351 108 43 chr2 175285362 175285547 -77971036 + L3 LINE CR1 1132 1328 -249 * 214 362 43 0 chr2 175285545 175285614 -77970969 + MER5A DNA MER1_type 109 180 -9 343 332 85 53 chr2 175285619 175285866 -77970717 + L3 LINE CR1 1305 1559 -18 248 303 14 97 chr2 175285850 175285995 -77970588 + L2 LINE L2 3140 3272 0 * 22 0 0 0 chr2 175286610 175286632 -77969951 + AT_rich Low_complexity Low_complexity 1 22 0 195 129 0 0 chr2 175286896 175286927 -77969656 + (A)n Simple_repeat Simple_repeat 1 31 0 312 315 16 63 chr2 175288103 175288230 -77968353 + MIR3 SINE MIR 45 165 -43 367 326 91 17 chr2 175289193 175289368 -77967215 + MER5A DNA MER1_type 1 188 -1 2206 158 40 42 chr2 175290584 175290637 -77965946 + MSTB LTR MaLR 3 55 -371 1967 166 0 7 chr2 175290637 175290938 -77965645 + AluSx SINE Alu 1 299 -13 2206 158 40 42 chr2 175290938 175291309 -77965274 + MSTB LTR MaLR 55 426 0 2373 141 6 3 chr2 175291547 175291910 -77964673 - THE1B LTR MaLR 0 364 1 949 274 7 0 chr2 175292087 175292357 -77964226 + L1MD3 LINE L1 7719 7990 -5 2309 92 7 3 chr2 175292622 175292915 -77963668 - AluSx SINE Alu -18 294 1 383 291 52 30 chr2 175293386 175293520 -77963063 + MER5B DNA MER1_type 6 142 -36 187 308 0 15 chr2 175293933 175293998 -77962585 + L2 LINE L2 3205 3268 -4 2774 41 3 0 chr2 175294139 175294479 -77962104 - L1PA5 LINE L1 0 6154 5814 2163 80 42 3 chr2 175295292 175295580 -77961003 + AluY SINE Alu 1 299 -12 254 270 20 10 chr2 175295695 175295795 -77960788 + L1MC/D LINE L1 5735 5835 -1973 668 277 44 65 chr2 175296043 175296364 -77960219 + L2 LINE L2 2992 3305 -8 1913 119 40 0 chr2 175297332 175297610 -77958973 - AluSx SINE Alu -23 289 1 368 262 69 45 chr2 175298411 175298577 -77958006 - MIR SINE MIR -62 146 15 507 237 90 0 chr2 175299834 175299990 -77956593 - MIR3 SINE MIR -8 200 31 460 314 69 23 chr2 175300113 175300416 -77956167 + L1ME4a LINE L1 5611 5927 -194 200 368 23 41 chr2 175300487 175300658 -77955925 - L2 LINE L2 -410 2904 2737 22 0 0 0 chr2 175301175 175301197 -77955386 + AT_rich Low_complexity Low_complexity 1 22 0 189 0 0 0 chr2 175303289 175303310 -77953273 + (A)n Simple_repeat Simple_repeat 1 21 0 236 155 17 35 chr2 175303682 175303740 -77952843 + MIR SINE MIR 98 154 -108 195 369 63 27 chr2 175304641 175304752 -77951831 + MIR3 SINE MIR 87 201 -7 218 238 181 29 chr2 175305383 175305488 -77951095 - MIR SINE MIR -23 239 119 306 272 179 11 chr2 175305841 175305975 -77950608 + MIR3 SINE MIR 4 143 -65 312 321 131 0 chr2 175306463 175306600 -77949983 - MIR SINE MIR -17 245 91 2765 124 7 5 chr2 175306709 175307119 -77949464 - L1PA15 LINE L1 0 6165 5755 1661 202 11 0 chr2 175307133 175307420 -77949163 - AluJo SINE Alu -22 290 1 2429 189 168 21 chr2 175307637 175308261 -77948322 + L1MC4 LINE L1 7327 8042 0 2155 101 6 25 chr2 175308270 175308586 -77947997 + AluSq SINE Alu 1 310 -3 2230 107 7 0 chr2 175309082 175309382 -77947201 - AluSx SINE Alu -10 302 1 2496 51 7 0 chr2 175309526 175309818 -77946765 + L1PA7 LINE L1 5860 6153 -1 2144 115 0 0 chr2 175311820 175312132 -77944451 - AluSc SINE Alu 0 309 1 30 27 0 0 chr2 175313536 175313573 -77943010 + AT_rich Low_complexity Low_complexity 1 37 0 222 222 0 0 chr2 175313637 175313691 -77942892 + (TAAA)n Simple_repeat Simple_repeat 4 57 0 565 300 80 16 chr2 175315011 175315464 -77941119 - L1MC5 LINE L1 -398 7410 7018 707 250 204 44 chr2 175315472 175315972 -77940611 + L1MC4 LINE L1 7462 8041 -1 425 338 15 8 chr2 175316560 175316693 -77939890 - L2 LINE L2 -1 3271 3138 228 278 35 76 chr2 175317389 175317533 -77939050 + L2 LINE L2 3127 3264 -49 2222 91 31 0 chr2 175318264 175318551 -77938032 + AluSx SINE Alu 1 296 -16 295 269 39 0 chr2 175320044 175320122 -77936461 - MIR SINE MIR -78 184 104 2329 97 3 10 chr2 175320765 175321076 -77935507 + AluSc SINE Alu 1 309 0 377 267 73 12 chr2 175324082 175324247 -77932336 + L1ME4a LINE L1 5944 6118 -3 1089 194 5 22 chr2 175325928 175326150 -77930433 - MER46A DNA MER2_type -17 219 2 22 0 0 0 chr2 175326622 175326644 -77929939 + AT_rich Low_complexity Low_complexity 1 22 0 28 48 0 0 chr2 175327052 175327094 -77929489 + AT_rich Low_complexity Low_complexity 1 42 0 348 250 138 47 chr2 175327927 175328110 -77928473 + L2 LINE L2 2538 2748 -566 2041 118 0 10 chr2 175328110 175328406 -77928177 + AluSc SINE Alu 1 293 -16 348 250 138 47 chr2 175328406 175328454 -77928129 + L2 LINE L2 2748 2790 -524 1842 178 0 7 chr2 175328978 175329287 -77927296 - AluJo SINE Alu -5 307 1 1055 169 12 0 chr2 175329519 175329679 -77926904 + FRAM SINE Alu 4 165 -1 455 307 36 18 chr2 175330106 175330272 -77926311 - Charlie8 DNA MER1_type -2188 229 61 190 286 16 16 chr2 175332633 175332696 -77923887 + L2 LINE L2 2683 2745 -569 376 306 44 33 chr2 175334073 175334253 -77922330 + MLT1L LTR MaLR 428 609 -6 442 264 209 0 chr2 175334653 175334801 -77921782 + MER5A DNA MER1_type 10 188 -1 516 82 41 0 chr2 175335327 175335400 -77921183 - MADE1 DNA Mariner -2 78 3 2270 96 0 10 chr2 175336133 175336435 -77920148 + AluY SINE Alu 1 299 -12 251 304 0 0 chr2 175337101 175337170 -77919413 - MIR3 SINE MIR -26 182 114 184 319 99 22 chr2 175337299 175337390 -77919193 + MIR SINE MIR 86 183 -79 1552 272 158 44 chr2 175337891 175338068 -77918515 - L2 LINE L2 0 3313 3157 990 169 49 27 chr2 175338068 175338252 -77918331 - MER5A DNA MER1_type -1 188 1 1552 272 158 44 chr2 175338252 175338950 -77917633 - L2 LINE L2 -156 3157 2355 201 238 113 38 chr2 175338969 175339049 -77917534 - MIR3 SINE MIR -19 189 104 348 327 83 6 chr2 175339333 175339489 -77917094 + L2 LINE L2 3140 3307 -6 266 330 160 0 chr2 175340633 175340727 -77915856 - L2 LINE L2 -26 3246 3138 470 248 58 29 chr2 175341338 175341475 -77915108 - MIR SINE MIR -114 148 8 2231 177 8 0 chr2 175342098 175342460 -77914123 - MLT1A1 LTR MaLR 0 365 1 673 295 40 9 chr2 175343298 175343522 -77913061 + MIR SINE MIR 26 256 -6 216 228 0 0 chr2 175345113 175345170 -77911413 + (TAG)n Simple_repeat Simple_repeat 1 57 0 536 299 113 9 chr2 175345193 175345414 -77911169 - MIR SINE MIR -11 251 8 279 223 48 29 chr2 175345614 175345717 -77910866 + L1MC5 LINE L1 7783 7887 -74 2307 98 10 0 chr2 175346681 175346987 -77909596 + AluSq SINE Alu 1 309 -4 23 54 0 0 chr2 175347277 175347314 -77909269 + AT_rich Low_complexity Low_complexity 1 37 0 2263 118 3 0 chr2 175347420 175347724 -77908859 + AluSx SINE Alu 1 305 -7 23 78 0 0 chr2 175347701 175347752 -77908831 + AT_rich Low_complexity Low_complexity 1 51 0 2089 153 0 3 chr2 175349069 175349382 -77907201 - AluJb SINE Alu 0 312 1 209 200 0 0 chr2 175350240 175350275 -77906308 + T-rich Low_complexity Low_complexity 2 36 0 224 357 0 0 chr2 175350661 175350731 -77905852 + MIR SINE MIR 81 150 -58 532 329 19 14 chr2 175350783 175350990 -77905593 + MIR SINE MIR 55 262 0 182 193 18 70 chr2 175351219 175351276 -77905307 - MIR SINE MIR -6 256 203 668 188 124 5 chr2 175351307 175351493 -77905090 - MER3 DNA MER1_type -1 208 1 214 297 66 11 chr2 175352504 175352595 -77903988 + MIR SINE MIR 125 220 -42 350 240 10 10 chr2 175352675 175352779 -77903804 - MER103 DNA DNA -9 157 54 1811 163 27 7 chr2 175353383 175353683 -77902900 + AluSx SINE Alu 1 306 -6 270 0 0 0 chr2 175354306 175354336 -77902247 + (TG)n Simple_repeat Simple_repeat 2 31 0 546 253 152 6 chr2 175355148 175355306 -77901277 - MER5A DNA MER1_type 0 189 9 1584 204 10 10 chr2 175356168 175356462 -77900121 - AluJo SINE Alu -18 294 1 598 295 47 11 chr2 175356658 175356848 -77899735 + MIR SINE MIR 48 244 -18 809 220 6 6 chr2 175357561 175357738 -77898845 - MER5B DNA MER1_type 0 178 2 2119 106 29 22 chr2 175358212 175358523 -77898060 - AluSq SINE Alu 0 313 1 747 189 8 0 chr2 175359391 175359523 -77897060 + FLAM_A SINE Alu 1 133 0 2322 109 0 0 chr2 175364739 175365043 -77891540 + AluSx SINE Alu 1 304 -8 187 277 191 43 chr2 175365144 175365285 -77891298 - MIR3 SINE MIR -4 204 43 4243 177 22 60 chr2 175365781 175366391 -77890192 + L1 LINE L1 3544 4176 -1970 1172 100 100 0 chr2 175366391 175366551 -77890032 + AluSg/x SINE Alu 121 296 -14 4243 177 22 60 chr2 175366551 175367305 -77889278 + L1 LINE L1 4176 4932 -1214 425 282 60 40 chr2 175369541 175369690 -77886893 - MIR SINE MIR -91 171 20 370 263 72 46 chr2 175370654 175370806 -77885777 - MIR3 SINE MIR -17 191 36 309 239 261 14 chr2 175370825 175370967 -77885616 - MER112 DNA MER1_type 0 260 84 216 346 12 0 chr2 175371987 175372068 -77884515 - L2 LINE L2 0 3272 3191 1775 185 8 58 chr2 175372143 175372537 -77884046 + MLT1A2 LTR MaLR 1 374 0 234 240 20 0 chr2 175372895 175372945 -77883638 + MIR3 SINE MIR 110 160 -48 2333 105 0 0 chr2 175373238 175373532 -77883051 + AluSg SINE Alu 1 294 -16 1012 245 14 0 chr2 175373557 175373773 -77882810 + MIR SINE MIR 39 257 -5 313 299 15 8 chr2 175373825 175373959 -77882624 - L1ME LINE L1 -349 5821 5687 405 322 38 4 chr2 175374404 175374643 -77881940 - Charlie8 DNA MER1_type -2131 286 40 233 113 208 0 chr2 175374751 175374804 -77881779 - MER116 DNA Mariner -15 65 2 23 33 0 0 chr2 175375257 175375287 -77881296 + AT_rich Low_complexity Low_complexity 1 30 0 203 369 15 0 chr2 175375994 175376059 -77880524 + MIR SINE MIR 51 116 -92 22 0 0 0 chr2 175377554 175377576 -77879007 + AT_rich Low_complexity Low_complexity 1 22 0 365 335 13 20 chr2 175377682 175377834 -77878749 + MER5A DNA MER1_type 36 186 -3 535 247 263 38 chr2 175377902 175378497 -77878086 - LTR50 LTR ERVL -3 659 9 506 283 27 43 chr2 175378757 175378941 -77877642 + MIR SINE MIR 79 259 -3 396 198 55 0 chr2 175379934 175380025 -77876558 - MER5A DNA MER1_type -85 104 9 1929 145 0 20 chr2 175380297 175380593 -77875990 + AluSx SINE Alu 1 290 -22 1237 173 0 14 chr2 175381366 175381574 -77875009 + AluJo SINE Alu 87 291 -21 2079 119 0 0 chr2 175381909 175382186 -77874397 + AluSq SINE Alu 11 287 -26 621 133 8 25 chr2 175382375 175382495 -77874088 + L1M1 LINE L1 4886 5003 -1143 1946 173 38 29 chr2 175382499 175383049 -77873534 - MLT2A2 LTR ERVL 0 554 1 2726 133 20 2 chr2 175383049 175383733 -77872850 + L1M1 LINE L1 5003 5699 -605 525 163 0 41 chr2 175383733 175383831 -77872752 - AluJo SINE Alu -123 189 96 1118 86 7 0 chr2 175383831 175383971 -77872612 - AluSq/x SINE Alu -170 143 3 24 0 0 0 chr2 175384471 175384495 -77872088 + AT_rich Low_complexity Low_complexity 1 24 0 2374 92 0 3 chr2 175385784 175386088 -77870495 - AluSg SINE Alu -7 303 1 566 256 87 6 chr2 175386600 175386698 -77869885 + MIR SINE MIR 77 166 -96 1750 149 66 30 chr2 175386698 175387060 -77869523 - THE1C LTR MaLR 0 375 1 566 256 87 6 chr2 175387060 175387133 -77869450 + MIR SINE MIR 166 262 0 2001 113 55 7 chr2 175387402 175387695 -77868888 + AluSx SINE Alu 1 307 -5 630 326 61 26 chr2 175387991 175388577 -77868006 + L1MEc LINE L1 90 696 -5700 2216 96 0 13 chr2 175388581 175388893 -77867690 + AluSx SINE Alu 1 308 -4 563 179 0 0 chr2 175388904 175388999 -77867584 + FLAM_A SINE Alu 38 132 -10 820 267 36 23 chr2 175389064 175389453 -77867130 + L1MEc LINE L1 759 1152 -5244 2377 196 105 19 chr2 175389489 175390192 -77866391 + L1MC4 LINE L1 7082 7845 -197 22 35 0 0 chr2 175390192 175390221 -77866362 + AT_rich Low_complexity Low_complexity 1 29 0 1590 214 150 67 chr2 175390229 175390914 -77865669 + L1M4 LINE L1 3833 4641 -1505 2268 134 0 0 chr2 175390914 175391219 -77865364 + AluSx SINE Alu 1 305 -7 1590 214 150 67 chr2 175391219 175391466 -77865117 + L1M4 LINE L1 4641 4866 -1280 353 219 0 11 chr2 175391480 175391583 -77865000 - L1ME2 LINE L1 -152 6010 5912 775 313 114 11 chr2 175391604 175391972 -77864611 - MLT1K LTR MaLR -87 501 96 21 0 0 0 chr2 175392730 175392751 -77863832 + AT_rich Low_complexity Low_complexity 1 21 0 1530 264 117 0 chr2 175393052 175393522 -77863061 + MLT1H1 LTR MaLR 12 536 -19 4881 59 3 0 chr2 175394586 175395192 -77861391 + L1PA7 LINE L1 5536 6143 -11 2488 74 0 3 chr2 175395950 175396262 -77860321 + AluY SINE Alu 1 311 0 2276 109 0 0 chr2 175397279 175397573 -77859010 - AluSx SINE Alu -11 301 8 237 191 159 0 chr2 175397652 175397715 -77858868 - MLT1K LTR MaLR -24 564 492 2078 103 4 18 chr2 175398391 175398672 -77857911 + AluSx SINE Alu 1 277 -35 2088 136 0 22 chr2 175398800 175399116 -77857467 + AluSx SINE Alu 1 309 -3 419 185 46 46 chr2 175399157 175399287 -77857296 + MER31-int LTR ERV1 2784 2913 -2023 662 191 55 0 chr2 175399331 175399441 -77857142 - FLAM_A SINE Alu -17 116 1 1112 243 125 85 chr2 175399914 175400618 -77855965 + MER31-int LTR ERV1 3330 4061 -875 2221 102 20 0 chr2 175400895 175401199 -77855384 + AluSg SINE Alu 1 310 0 2186 104 7 3 chr2 175401272 175401571 -77855012 - AluSx SINE Alu -12 300 1 758 306 115 28 chr2 175402768 175402917 -77853666 - L2 LINE L2 -1 3312 3177 1939 95 73 4 chr2 175402917 175403190 -77853393 + AluSx SINE Alu 1 292 -20 758 306 115 28 chr2 175403190 175403809 -77852774 - L2 LINE L2 -136 3177 2472 2360 99 0 6 chr2 175404290 175404602 -77851981 + AluSq SINE Alu 1 310 -3 2191 89 46 0 chr2 175406068 175406349 -77850234 - AluSg SINE Alu -16 294 1 1902 144 0 40 chr2 175406919 175407217 -77849366 + AluSx SINE Alu 1 286 -26 315 0 0 0 chr2 175407221 175407256 -77849327 + (TAAAA)n Simple_repeat Simple_repeat 2 36 0 381 311 34 17 chr2 175408628 175408805 -77847778 + MER5A DNA MER1_type 7 186 -3 308 256 256 0 chr2 175408931 175409048 -77847535 - MIR SINE MIR -69 193 47 803 181 93 84 chr2 175409540 175409755 -77846828 - MER20 DNA MER1_type 0 219 3 186 191 0 0 chr2 175409964 175410006 -77846577 + A-rich Low_complexity Low_complexity 1 42 0 2245 96 0 3 chr2 175410139 175410430 -77846153 - AluSx SINE Alu -22 290 1 181 359 16 0 chr2 175410698 175410762 -77845821 - L2 LINE L2 -10 3262 3198 242 222 103 17 chr2 175411604 175411721 -77844862 + L1MC4 LINE L1 7916 8042 0 518 172 52 9 chr2 175411842 175411958 -77844625 + L1ME4a LINE L1 5979 6099 -22 30 45 0 0 chr2 175411968 175412012 -77844571 + AT_rich Low_complexity Low_complexity 1 44 0 1675 148 19 53 chr2 175412064 175412382 -77844201 + AluJo SINE Alu 6 312 0 2298 99 3 3 chr2 175412824 175413137 -77843446 - AluSp SINE Alu 0 313 1 181 219 0 0 chr2 175413158 175413190 -77843393 + MIR SINE MIR 81 112 -150 295 320 90 8 chr2 175414316 175414438 -77842145 - MIR SINE MIR -113 149 18 359 253 111 82 chr2 175415228 175415544 -77841039 + MLT1I LTR MaLR 83 407 -2 2101 113 3 16 chr2 175415931 175416241 -77840342 + AluSp SINE Alu 1 306 -7 2100 144 10 0 chr2 175416253 175416559 -77840024 + AluSx SINE Alu 1 309 -3 495 48 0 0 chr2 175416562 175416624 -77839959 + (GGAA)n Simple_repeat Simple_repeat 3 64 0 2007 152 0 0 chr2 175417052 175417355 -77839228 - AluSx SINE Alu -9 303 1 186 256 0 0 chr2 175418984 175419027 -77837556 + MIR SINE MIR 77 119 -143 213 296 174 10 chr2 175419813 175419911 -77836672 + MIR SINE MIR 149 262 0 1271 147 5 27 chr2 175420019 175420243 -77836340 + AluJo SINE Alu 83 301 -11 274 328 35 0 chr2 175420390 175420506 -77836077 + L1ME4a LINE L1 5695 5814 -307 415 306 96 6 chr2 175420595 175420752 -77835831 + MIR SINE MIR 11 181 -81 1090 146 48 125 chr2 175420881 175421176 -77835407 + L1MB5 LINE L1 5893 6164 -10 269 277 18 27 chr2 175421435 175421547 -77835036 - L1MC4a LINE L1 -1892 5916 5806 1924 151 88 3 chr2 175424076 175424393 -77832190 + MER2 DNA MER2_type 1 344 0 1231 99 0 6 chr2 175425673 175425834 -77830749 + AluSg/x SINE Alu 135 294 -16 670 170 9 9 chr2 175426635 175426741 -77829842 - FLAM_C SINE Alu -25 118 13 200 116 0 139 chr2 175426896 175426939 -77829644 + MIR SINE MIR 2 38 -224 344 255 51 0 chr2 175429377 175429475 -77827108 + MIR SINE MIR 134 236 -26 304 273 64 76 chr2 175429519 175429691 -77826892 - MIR SINE MIR -56 206 37 2370 99 3 6 chr2 175429761 175430073 -77826510 + AluSx SINE Alu 1 311 -1 330 316 70 23 chr2 175430193 175430364 -77826219 + MIR SINE MIR 77 255 -7 192 77 0 0 chr2 175433149 175433175 -77823408 + (CACCC)n Simple_repeat Simple_repeat 5 30 0 260 314 57 9 chr2 175433299 175433404 -77823179 + L1ME4a LINE L1 5549 5658 -2150 291 275 33 71 chr2 175433641 175433823 -77822760 + L1ME4a LINE L1 5874 6048 -73 2213 79 62 0 chr2 175434198 175434489 -77822094 - AluY SINE Alu -2 309 1 239 261 135 18 chr2 175434906 175435017 -77821566 + L1ME4a LINE L1 5985 6108 -13 2064 121 17 0 chr2 175435041 175435330 -77821253 + AluSq SINE Alu 1 294 -19 2018 115 3 58 chr2 175435620 175435932 -77820651 + AluSg SINE Alu 1 295 -15 200 226 0 19 chr2 175435975 175436028 -77820555 + A-rich Low_complexity Low_complexity 3 54 0 1392 268 72 25 chr2 175436665 175437177 -77819406 + MLT1H LTR MaLR 14 549 0 343 303 121 0 chr2 175437691 175437823 -77818760 + MARNA DNA Mariner 86 233 -353 2333 88 0 3 chr2 175439163 175439458 -77817125 + AluSg SINE Alu 1 294 -16 945 228 19 19 chr2 175440752 175440958 -77815625 + MER3 DNA MER1_type 1 206 -3 934 165 0 0 chr2 175441403 175441536 -77815047 + FLAM_C SINE Alu 1 133 0 2158 113 0 20 chr2 175441572 175441874 -77814709 - AluSg SINE Alu -14 296 1 12900 25 8 0 chr2 175441981 175444212 -77812371 - L1PA4 LINE L1 0 6155 3937 513 210 10 0 chr2 175446491 175446591 -77809992 + L1ME3A LINE L1 6059 6159 -11 500 349 126 34 chr2 175446658 175447285 -77809298 - L2 LINE L2 -340 2974 2290 196 307 155 60 chr2 175447366 175447780 -77808803 - L2 LINE L2 -1245 2069 1617 622 249 106 18 chr2 175448313 175448530 -77808053 - MIR SINE MIR -4 258 23 548 89 11 22 chr2 175448728 175448818 -77807765 + L1MB4 LINE L1 6091 6179 -1 1724 139 61 4 chr2 175448830 175449110 -77807473 + AluSx SINE Alu 1 296 -16 333 0 0 0 chr2 175449110 175449147 -77807436 + (TA)n Simple_repeat Simple_repeat 2 38 0 1781 156 3 31 chr2 175449151 175449472 -77807111 + AluJo SINE Alu 1 312 0 292 304 165 45 chr2 175451752 175451995 -77804588 + L2 LINE L2 2999 3270 -2 25 31 0 0 chr2 175452496 175452528 -77804055 + AT_rich Low_complexity Low_complexity 1 32 0 216 0 0 0 chr2 175453587 175453611 -77802972 + (A)n Simple_repeat Simple_repeat 1 24 0 252 0 0 0 chr2 175453741 175453769 -77802814 + (A)n Simple_repeat Simple_repeat 1 28 0 42 71 0 0 chr2 175453962 175454046 -77802537 + GC_rich Low_complexity Low_complexity 1 84 0 189 74 0 0 chr2 175454216 175454243 -77802340 + (CCG)n Simple_repeat Simple_repeat 1 27 0 696 181 170 29 chr2 175456453 175456522 -77800061 - MER20 DNA MER1_type 0 219 161 1723 201 77 0 chr2 175456522 175456861 -77799722 + MLT1A1 LTR MaLR 1 365 0 696 181 170 29 chr2 175456861 175456962 -77799621 - MER20 DNA MER1_type -58 161 25 1476 82 0 53 chr2 175457157 175457331 -77799252 - AluSq SINE Alu -14 299 136 2459 74 0 6 chr2 175457331 175457643 -77798940 - AluY SINE Alu -1 310 1 1476 82 0 53 chr2 175457643 175457675 -77798908 - AluSq SINE Alu -177 136 104 1999 120 7 14 chr2 175457683 175457974 -77798609 - AluSx SINE Alu -23 289 1 1676 164 24 14 chr2 175457980 175458267 -77798316 - AluJo SINE Alu -22 290 1 312 231 261 8 chr2 175458285 175458415 -77798168 + MIR SINE MIR 86 248 -14 579 186 25 25 chr2 175458515 175458633 -77797950 + L2 LINE L2 3193 3310 -3 195 327 27 64 chr2 175458703 175458813 -77797770 - L2 LINE L2 -649 2665 2560 283 288 200 18 chr2 175459215 175459385 -77797198 + MIR SINE MIR 12 212 -50 1826 160 70 72 chr2 175459481 175459919 -77796664 + MLT1C LTR MaLR 8 446 -21 1846 126 171 58 chr2 175459919 175460030 -77796553 - MER65A LTR ERV1 0 445 348 243 0 0 0 chr2 175460030 175460057 -77796526 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1846 126 171 58 chr2 175460057 175460343 -77796240 - MER65A LTR ERV1 -97 348 3 1826 160 70 72 chr2 175460343 175460360 -77796223 + MLT1C LTR MaLR 446 462 -5 2066 106 58 7 chr2 175460451 175460743 -77795840 + AluSx SINE Alu 1 307 -5 211 299 111 26 chr2 175461885 175462002 -77794581 - L2 LINE L2 0 3313 3187 816 119 0 2 chr2 175462074 175462335 -77794248 + AluSx SINE Alu 1 310 0 397 239 100 23 chr2 175462776 175462906 -77793677 - Charlie8 DNA MER1_type -2227 190 51 235 280 47 19 chr2 175463119 175463226 -77793357 + L1MC4 LINE L1 7933 8042 0 335 344 134 6 chr2 175463392 175463549 -77793034 + MER5B DNA MER1_type 1 177 -1 3600 63 20 14 chr2 175463725 175464116 -77792467 + MLT2A1 LTR ERVL 1 397 -47 405 0 0 0 chr2 175464116 175464161 -77792422 + (CA)n Simple_repeat Simple_repeat 2 46 0 3600 63 20 14 chr2 175464161 175464210 -77792373 + MLT2A1 LTR ERVL 397 444 0 17908 111 10 6 chr2 175464210 175464872 -77791711 + HERVL-A1 LTR ERVL 1 659 -4995 1976 133 4 0 chr2 175464872 175465201 -77791382 - AluSx SINE Alu 0 333 4 17908 111 10 6 chr2 175465201 175470111 -77786472 + HERVL-A1 LTR ERVL 659 5654 0 3589 57 2 63 chr2 175470111 175470584 -77785999 + MLT2A1 LTR ERVL 1 444 0 1243 118 21 11 chr2 175470621 175470808 -77785775 - L1MC1 LINE L1 -2 6331 6143 639 157 0 0 chr2 175470808 175470910 -77785673 + L1MC1 LINE L1 6038 6139 -194 2204 104 13 13 chr2 175470910 175471218 -77785365 - AluSg SINE Alu -2 308 1 324 255 57 64 chr2 175471285 175471426 -77785157 - L2 LINE L2 -12 3260 3121 328 305 42 47 chr2 175471950 175472140 -77784443 - MIR SINE MIR -38 224 36 29 70 0 0 chr2 175472183 175472240 -77784343 + AT_rich Low_complexity Low_complexity 1 57 0 1859 162 0 19 chr2 175473134 175473312 -77783271 - AluJb SINE Alu -2 310 130 243 0 0 0 chr2 175473312 175473339 -77783244 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2094 125 0 0 chr2 175473339 175473619 -77782964 - AluSc SINE Alu -29 280 1 1859 162 0 19 chr2 175473619 175473753 -77782830 - AluJb SINE Alu -180 132 3 2213 105 7 3 chr2 175473913 175474209 -77782374 - AluSc SINE Alu -12 297 1 500 190 86 0 chr2 175474553 175474669 -77781914 - L1ME2 LINE L1 0 6164 6039 * 987 267 155 25 chr2 175474668 175474955 -77781628 - L1ME2 LINE L1 -480 5832 5469 2129 70 0 0 chr2 175474955 175475212 -77781371 - AluY SINE Alu -12 299 43 987 267 155 25 chr2 175475212 175475333 -77781250 - L1ME2 LINE L1 -843 5469 5365 285 301 29 10 chr2 175476168 175476271 -77780312 - MIR SINE MIR -95 167 63 570 266 65 91 chr2 175476398 175476706 -77779877 - MARNA DNA Mariner -17 569 270 1040 78 0 72 chr2 175476757 175476910 -77779673 + L1PA8A LINE L1 5990 6131 0 253 261 29 14 chr2 175476991 175477060 -77779523 - LTR67 LTR ERVL -389 168 99 2543 175 177 23 chr2 175477092 175477624 -77778959 - LTR18B LTR ERVL 0 614 1 210 271 73 21 chr2 175477745 175477841 -77778742 + MIR3 SINE MIR 101 201 -7 2320 89 0 3 chr2 175478383 175478674 -77777909 + AluSc SINE Alu 1 290 -19 1695 227 125 20 chr2 175478843 175479332 -77777251 + MLT1H LTR MaLR 1 540 -9 232 290 85 0 chr2 175479410 175479586 -77776997 - L1ME4a LINE L1 -4 6117 5927 2381 76 7 3 chr2 175479615 175479918 -77776665 - AluY SINE Alu -7 304 1 2028 137 0 19 chr2 175479920 175480227 -77776356 - AluSx SINE Alu -8 304 4 27 0 0 0 chr2 175480246 175480273 -77776310 + AT_rich Low_complexity Low_complexity 1 27 0 256 196 0 18 chr2 175480429 175480485 -77776098 - L1M1 LINE L1 -749 5554 5500 2905 222 41 19 chr2 175480582 175481266 -77775317 - L1ME2 LINE L1 -3 6161 5463 544 279 61 72 chr2 175481558 175481715 -77774868 - L1ME4a LINE L1 -2037 5771 5614 2143 173 62 0 chr2 175481715 175482085 -77774498 + MLT2C1 LTR ERVL 1 393 -4 544 279 61 72 chr2 175482085 175482289 -77774294 - L1ME4a LINE L1 -2194 5614 5414 437 236 16 0 chr2 175482592 175482839 -77773744 + (TA)n Simple_repeat Simple_repeat 1 251 0 1577 201 28 0 chr2 175483115 175483280 -77773303 - AluJb SINE Alu -15 297 119 201 39 0 0 chr2 175483280 175483306 -77773277 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 1577 201 28 0 chr2 175483306 175483429 -77773154 - AluJb SINE Alu -193 119 1 323 280 60 73 chr2 175483435 175483667 -77772916 - L1ME4a LINE L1 -1896 4250 4022 628 260 55 11 chr2 175483940 175484121 -77772462 - MER5A DNA MER1_type 0 189 1 864 287 117 32 chr2 175484434 175484877 -77771706 + MLT1J LTR MaLR 21 501 -10 2052 107 0 21 chr2 175484878 175485208 -77771375 - AluSx SINE Alu 0 324 1 342 0 0 0 chr2 175485784 175485822 -77770761 + (TG)n Simple_repeat Simple_repeat 1 38 0 1040 223 5 14 chr2 175486242 175486453 -77770130 - MER63A DNA MER1_type 0 210 2 264 283 111 0 chr2 175487315 175487414 -77769169 + L1M LINE L1 5285 5394 -2414 1060 167 17 11 chr2 175487416 175487590 -77768993 - FAM SINE Alu 0 175 1 214 378 11 0 chr2 175487999 175488089 -77768494 - MIR SINE MIR -1 261 171 570 269 81 46 chr2 175489025 175489397 -77767186 - MLT1H LTR MaLR -9 540 96 2106 101 0 50 chr2 175489602 175489919 -77766664 + AluSg SINE Alu 1 301 -9 542 273 91 14 chr2 175490478 175490698 -77765885 - LTR33A LTR ERVL 0 523 287 228 238 0 48 chr2 175542114 175542177 -77714406 + GA-rich Low_complexity Low_complexity 3 62 0 5621 198 8 2 chr2 175542534 175543590 -77712993 + L1M1 LINE L1 353 1415 -6150 1911 147 10 3 chr2 175544427 175544719 -77711864 - AluSx SINE Alu -18 294 1 236 237 13 40 chr2 175545452 175545528 -77711055 + GA-rich Low_complexity Low_complexity 6 79 0 371 266 71 0 chr2 175546160 175546273 -77710310 - MIR3 SINE MIR -5 203 83 1127 121 0 11 chr2 175546477 175546659 -77709924 - L1MB3 LINE L1 -2 6181 6002 316 0 0 23 chr2 175546799 175546842 -77709741 + MADE1 DNA Mariner 39 80 0 5192 138 31 11 chr2 175548026 175549679 -77706904 - L1PA16 LINE L1 0 6166 4480 238 171 13 13 chr2 175549679 175549755 -77706828 - L1PA16 LINE L1 -2976 3170 3095 1110 193 5 5 chr2 175549865 175550052 -77706531 - AluJo SINE Alu -125 187 1 2265 96 0 20 chr2 175550280 175550582 -77706001 + AluSc SINE Alu 1 296 -13 626 294 309 15 chr2 175550691 175551028 -77705555 - L2 LINE L2 -10 3303 2868 489 325 75 47 chr2 175551040 175551295 -77705288 - MIR SINE MIR 0 262 1 5032 161 12 35 chr2 175552343 175552471 -77704112 - L1MA6 LINE L1 0 6300 6171 2163 97 28 0 chr2 175552471 175552761 -77703822 - AluSp SINE Alu -15 298 1 5032 161 12 35 chr2 175552761 175553853 -77702730 - L1MA6 LINE L1 -129 6171 5108 2789 123 31 2 chr2 175553861 175554210 -77702373 - L1PB1 LINE L1 -5 6146 5779 207 100 0 0 chr2 175554210 175554240 -77702343 + (TA)n Simple_repeat Simple_repeat 1 30 0 2789 123 31 2 chr2 175554240 175554347 -77702236 - L1PB1 LINE L1 -372 5779 5677 341 264 152 52 chr2 175554525 175554609 -77701974 + HAL1 LINE L1 2141 2215 -292 2241 100 3 3 chr2 175554609 175554910 -77701673 + AluSx SINE Alu 1 301 -11 341 264 152 52 chr2 175554910 175555094 -77701489 + HAL1 LINE L1 2215 2436 -71 21 0 0 0 chr2 175555238 175555259 -77701324 + AT_rich Low_complexity Low_complexity 1 21 0 280 269 11 54 chr2 175555604 175555697 -77700886 + MIR SINE MIR 49 137 -125 1820 132 77 0 chr2 175556201 175556474 -77700109 + AluSx SINE Alu 1 294 -18 196 278 37 0 chr2 175556481 175556535 -77700048 + L2 LINE L2 3225 3280 -33 2236 104 17 46 chr2 175558171 175558518 -77698065 + MER1B DNA MER1_type 1 337 0 307 250 22 59 chr2 175558529 175558665 -77697918 + MIR SINE MIR 132 262 0 404 276 44 83 chr2 175559396 175559624 -77696959 + MIR SINE MIR 14 232 -30 21 57 0 0 chr2 175559680 175559715 -77696868 + AT_rich Low_complexity Low_complexity 1 35 0 356 324 76 59 chr2 175559733 175559971 -77696612 + L3 LINE CR1 1029 1270 -307 1011 319 27 17 chr2 175560013 175560598 -77695985 - L1MEd LINE L1 -5494 625 4 23 54 0 0 chr2 175560601 175560638 -77695945 + AT_rich Low_complexity Low_complexity 1 37 0 216 0 0 0 chr2 175562402 175562426 -77694157 + (CAA)n Simple_repeat Simple_repeat 2 25 0 1364 221 54 54 chr2 175563258 175563328 -77693255 + MER41B LTR ERV1 112 181 -454 2155 124 0 0 chr2 175563328 175563661 -77692922 + AluSg SINE Alu 1 333 0 1364 221 54 54 chr2 175563661 175564072 -77692511 + MER41B LTR ERV1 180 595 -40 1160 120 0 0 chr2 175565468 175565618 -77690965 + AluSg/x SINE Alu 152 301 -9 28 71 0 0 chr2 175565815 175565871 -77690712 + AT_rich Low_complexity Low_complexity 1 56 0 21 0 0 0 chr2 175566080 175566101 -77690482 + AT_rich Low_complexity Low_complexity 1 21 0 247 139 0 0 chr2 175566246 175566282 -77690301 + MER5B DNA MER1_type 3 38 -140 26 0 0 0 chr2 175566626 175566652 -77689931 + AT_rich Low_complexity Low_complexity 1 26 0 2423 110 39 6 chr2 175567013 175567376 -77689207 - THE1C LTR MaLR 0 375 1 237 294 0 0 chr2 175568248 175568316 -77688267 + CT-rich Low_complexity Low_complexity 2 69 0 21 0 0 0 chr2 175568693 175568714 -77687869 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr2 175568975 175568996 -77687587 + (ATTG)n Simple_repeat Simple_repeat 2 22 0 1090 110 0 7 chr2 175568996 175569151 -77687432 - AluSg/x SINE Alu -28 282 129 238 231 0 0 chr2 175569573 175569625 -77686958 - MLT1H1 LTR MaLR 0 555 504 737 247 64 8 chr2 175569737 175569972 -77686611 - MLT1H1 LTR MaLR -299 256 9 1490 222 31 86 chr2 175570220 175570769 -77685814 - MLT2B1 LTR ERVL 0 520 2 555 294 127 56 chr2 175571303 175571697 -77684886 - L2 LINE L2 0 3272 2851 236 226 79 110 chr2 175571679 175571845 -77684738 - MIR SINE MIR -63 145 18 * 21 36 0 0 chr2 175572547 175572575 -77684008 + AT_rich Low_complexity Low_complexity 1 28 0 2255 96 7 3 chr2 175573072 175573374 -77683209 - AluY SINE Alu -8 303 1 501 186 90 32 chr2 175573453 175573609 -77682974 + MLT1F1 LTR MaLR 403 567 0 791 209 144 9 chr2 175573664 175573908 -77682675 - MLT1J2 LTR MaLR -149 301 8 2326 64 34 7 chr2 175575421 175575718 -77680865 + AluY SINE Alu 1 305 -6 4287 212 112 20 chr2 175575745 175577385 -77679198 + L1ME LINE L1 3767 5552 -614 1620 230 39 54 chr2 175577371 175577931 -77678652 - L1ME1 LINE L1 -45 6121 5570 * 302 255 54 66 chr2 175577935 175578096 -77678487 - MIR SINE MIR -36 172 31 225 331 51 0 chr2 175578273 175578430 -77678153 - MER103 DNA DNA -1 165 1 625 228 124 51 chr2 175579286 175579680 -77676903 + LTR33 LTR ERVL 83 505 -16 1716 166 18 0 chr2 175580410 175580714 -77675869 + AluJb SINE Alu 1 309 0 1146 160 0 0 chr2 175581173 175581342 -77675241 - AluJo SINE Alu -7 305 137 746 198 0 0 chr2 175582048 175582174 -77674409 - AluJo SINE Alu -175 127 2 200 35 35 0 chr2 175582352 175582381 -77674202 + (GA)n Simple_repeat Simple_repeat 2 31 0 393 215 85 70 chr2 175582427 175582617 -77673966 - MLT1K LTR MaLR -1 587 395 1199 191 46 0 chr2 175582617 175582899 -77673684 + MER63 DNA MER1_type 3 297 -764 1185 201 80 20 chr2 175582909 175583258 -77673325 + MLT1B LTR MaLR 1 370 -20 588 239 94 0 chr2 175583279 175583480 -77673103 + MER63 DNA MER1_type 438 657 -404 1010 211 37 18 chr2 175583481 175583699 -77672884 + MER58A DNA MER1_type 3 224 0 * 1873 158 18 91 chr2 175583699 175584143 -77672440 + MER63 DNA MER1_type 649 1059 -2 701 328 37 52 chr2 175584475 175584935 -77671648 - L3 LINE CR1 -458 1119 667 209 344 16 0 chr2 175585810 175585871 -77670712 + L2 LINE L2 3231 3292 -21 840 137 8 8 chr2 175587036 175587167 -77669416 - AluJo SINE Alu -169 133 3 326 203 53 4 chr2 175587865 175587975 -77668608 - L1MC4 LINE L1 -1339 6983 1995 195 175 75 0 chr2 175588017 175588057 -77668526 - L2 LINE L2 -10 3303 3261 3486 159 47 6 chr2 175588135 175588790 -77667793 + L1MB3 LINE L1 5444 6125 -58 1575 179 3 44 chr2 175588793 175589090 -77667493 - AluJo SINE Alu -19 293 9 293 328 71 58 chr2 175589110 175589421 -77667162 - L2 LINE L2 -148 3165 2851 188 204 61 122 chr2 175589672 175589770 -77666813 + MER5A DNA MER1_type 61 152 -37 * 294 336 23 39 chr2 175589721 175589849 -77666734 + MIR SINE MIR 61 186 -76 1860 174 3 0 chr2 175589986 175590284 -77666299 + AluJb SINE Alu 1 299 -13 429 228 31 55 chr2 175590975 175591102 -77665481 + L2 LINE L2 3190 3313 0 714 182 49 0 chr2 175592967 175593141 -77663442 - L1MD3 LINE L1 -142 7825 7460 2121 116 3 7 chr2 175593583 175593876 -77662707 + AluSg SINE Alu 1 292 -18 2269 227 18 0 chr2 175593935 175594424 -77662159 + MLT1D LTR MaLR 1 498 -7 596 174 25 0 chr2 175594457 175594578 -77662005 + L1MA3 LINE L1 12 135 -7430 * 14931 147 30 10 chr2 175594574 175597578 -77659005 + L1MA3 LINE L1 1105 4046 -3678 4829 57 0 0 chr2 175597578 175598175 -77658408 + L1PA6 LINE L1 5550 6146 -8 14931 147 30 10 chr2 175598175 175601663 -77654920 + L1MA3 LINE L1 4046 7724 0 460 259 146 5 chr2 175602254 175602439 -77654144 - LTR67 LTR ERVL 0 557 347 1382 178 16 55 chr2 175602628 175602654 -77653929 + AluJo SINE Alu 1 26 -286 1840 128 60 81 chr2 175602654 175602888 -77653695 - THE1C LTR MaLR 0 375 151 2116 121 3 34 chr2 175602888 175603211 -77653372 - AluSq SINE Alu 0 313 1 1840 128 60 81 chr2 175603211 175603359 -77653224 - THE1C LTR MaLR -224 151 1 1382 178 16 55 chr2 175603359 175603641 -77652942 + AluJo SINE Alu 26 297 -15 312 280 14 118 chr2 175603651 175603862 -77652721 - LTR67 LTR ERVL -367 190 2 581 231 49 20 chr2 175604086 175604289 -77652294 + L1MC5 LINE L1 7732 7940 -21 12499 146 21 1 chr2 175604655 175605440 -77651143 + L1 LINE L1 2975 3743 -2403 2148 43 0 12 chr2 175605440 175605697 -77650886 + AluY SINE Alu 49 302 -9 12499 146 21 1 chr2 175605697 175607014 -77649569 + L1 LINE L1 3743 5119 -1027 618 250 41 0 chr2 175607008 175607180 -77649403 + L1PBa LINE L1 18 196 -6667 * 12253 204 19 11 chr2 175607178 175611126 -77645457 + L1PBa LINE L1 1392 5420 -1442 5711 233 26 6 chr2 175611241 175613244 -77643339 - L1PA13 LINE L1 -3417 3380 1330 1946 318 11 16 chr2 175613337 175613944 -77642639 - L1PA13 LINE L1 -6183 604 1 210 143 0 0 chr2 175614210 175614245 -77642338 + (CAT)n Simple_repeat Simple_repeat 1 35 0 222 247 27 14 chr2 175614951 175615024 -77641559 + L2 LINE L2 2671 2744 -570 366 310 59 73 chr2 175615213 175615384 -77641199 + L2 LINE L2 3015 3182 -131 1675 223 103 73 chr2 175615384 175616025 -77640558 - MLT2F LTR ERVL 0 663 4 366 310 59 73 chr2 175616025 175616156 -77640427 + L2 LINE L2 3182 3313 0 910 194 17 11 chr2 175616171 175616346 -77640237 - AluJo SINE Alu -16 296 121 22 0 0 0 chr2 175616566 175616588 -77639995 + AT_rich Low_complexity Low_complexity 1 22 0 7145 128 21 9 chr2 175617423 175618520 -77638063 + HSMAR2 DNA Mariner 4 1113 -189 188 61 61 0 chr2 175618563 175618596 -77637987 + (TTTAA)n Simple_repeat Simple_repeat 1 35 0 850 229 0 0 chr2 175618596 175618749 -77637834 - AluJb SINE Alu -26 286 134 17085 88 18 1 chr2 175618749 175619421 -77637162 - L1PA7 LINE L1 0 6154 5495 2022 137 3 3 chr2 175619421 175619720 -77636863 - AluSx SINE Alu -13 299 1 17085 88 18 1 chr2 175619720 175622104 -77634479 - L1PA7 LINE L1 -659 5495 3070 53 17 0 0 chr2 175622104 175622164 -77634419 + AT_rich Low_complexity Low_complexity 1 60 0 13396 134 19 118 chr2 175622164 175622700 -77633883 - L1PA7 LINE L1 -3405 2741 2154 2489 66 17 0 chr2 175622700 175623001 -77633582 - AluY SINE Alu -5 306 1 13396 134 19 118 chr2 175623001 175625497 -77631086 - L1PA7 LINE L1 -3992 2154 9 291 326 0 11 chr2 175625563 175625655 -77630928 - L2 LINE L2 -55 3258 3168 2537 128 0 3 chr2 175626063 175626423 -77630160 - THE1B LTR MaLR -5 359 1 10978 109 32 40 chr2 175626423 175628015 -77628568 - THE1B-int LTR MaLR 0 1580 1 2449 140 37 0 chr2 175628016 175628366 -77628217 - THE1B LTR MaLR -1 363 1 1655 167 0 72 chr2 175628777 175629112 -77627471 + AluJb SINE Alu 1 311 -1 286 259 150 34 chr2 175629145 175629439 -77627144 + L1ME3A LINE L1 4373 4700 -1446 403 230 60 51 chr2 175629454 175629671 -77626912 + L1ME3A LINE L1 5087 5305 -841 562 303 50 72 chr2 175629679 175630077 -77626506 + L1ME3A LINE L1 5544 5883 -287 2253 108 10 0 chr2 175630077 175630384 -77626199 + AluSx SINE Alu 1 310 -2 562 303 50 72 chr2 175630384 175630429 -77626154 + L1ME3A LINE L1 5883 5927 -243 819 214 0 0 chr2 175630729 175630874 -77625709 - FRAM SINE Alu -30 146 2 1941 127 0 14 chr2 175632879 175633163 -77623420 - AluJo SINE Alu -30 282 3 2492 60 0 0 chr2 175633328 175633626 -77622957 - AluY SINE Alu -13 298 1 840 258 26 15 chr2 175633946 175634214 -77622369 + AluY SINE Alu 1 271 -40 195 352 0 0 chr2 175635495 175635549 -77621034 + L2 LINE L2 3041 3094 -178 433 246 9 18 chr2 175636031 175636145 -77620438 - MER34C LTR ERV1 0 585 473 483 345 90 33 chr2 175636544 175637153 -77619430 - L2 LINE L2 -346 2968 2325 967 183 16 16 chr2 175637367 175637553 -77619030 - L1MB7 LINE L1 -2 6182 5997 1284 177 0 33 chr2 175638014 175638229 -77618354 - AluJo SINE Alu -101 211 4 332 291 50 43 chr2 175639308 175639449 -77617134 + MIR SINE MIR 9 150 -112 879 284 97 37 chr2 175640198 175640631 -77615952 + LTR67 LTR ERVL 2 460 -97 926 231 113 40 chr2 175640779 175641397 -77615186 + MER20B DNA MER1_type 47 755 -28 1409 166 72 16 chr2 175643389 175643696 -77612887 + MER33 DNA MER1_type 1 324 0 32 26 0 0 chr2 175645070 175645109 -77611474 + AT_rich Low_complexity Low_complexity 1 39 0 1101 242 263 17 chr2 175645109 175645375 -77611208 - MLT1G1 LTR MaLR -61 529 330 219 36 0 0 chr2 175645375 175645403 -77611180 + (TG)n Simple_repeat Simple_repeat 1 28 0 186 43 0 0 chr2 175645402 175645425 -77611158 + (GA)n Simple_repeat Simple_repeat 1 23 0 * 1101 242 263 17 chr2 175645403 175645629 -77610954 - MLT1G1 LTR MaLR -260 330 1 332 330 51 8 chr2 175645637 175645755 -77610828 - MIR SINE MIR -122 140 18 23 54 0 0 chr2 175645800 175645837 -77610746 + AT_rich Low_complexity Low_complexity 1 37 0 252 0 0 0 chr2 175646364 175646392 -77610191 + (A)n Simple_repeat Simple_repeat 1 28 0 2403 81 3 0 chr2 175646398 175646695 -77609888 + AluY SINE Alu 2 299 -12 254 241 0 0 chr2 175647276 175647330 -77609253 + GA-rich Low_complexity Low_complexity 2 55 0 396 259 78 102 chr2 175647332 175647537 -77609046 - MIR SINE MIR -6 256 57 239 331 74 25 chr2 175647668 175647789 -77608794 - L2 LINE L2 -14 3258 3132 259 273 74 40 chr2 175648063 175648239 -77608344 - L2 LINE L2 -454 2860 2679 4532 127 35 6 chr2 175649689 175650384 -77606199 - MER50 LTR ERV1 -12 722 8 1489 188 3 70 chr2 175650638 175650725 -77605858 - 7SLRNA srpRNA srpRNA -12 308 217 2517 129 89 5 chr2 175650725 175651120 -77605463 - MSTA LTR MaLR 0 428 1 1489 188 3 70 chr2 175651120 175651362 -77605221 - 7SLRNA srpRNA srpRNA -103 217 1 529 277 98 35 chr2 175651784 175652069 -77604514 - L2 LINE L2 -1 3312 3010 22 0 0 0 chr2 175653317 175653339 -77603244 + AT_rich Low_complexity Low_complexity 1 22 0 298 279 173 0 chr2 175654373 175654477 -77602106 + L2 LINE L2 3151 3272 0 240 192 0 19 chr2 175654537 175654589 -77601994 + CT-rich Low_complexity Low_complexity 2 52 0 642 318 54 17 chr2 175654608 175654847 -77601736 - MIR SINE MIR -14 248 1 716 294 51 32 chr2 175654926 175655242 -77601341 + MLT1I LTR MaLR 80 401 -8 23 33 0 0 chr2 175655424 175655454 -77601129 + AT_rich Low_complexity Low_complexity 1 30 0 2274 70 13 7 chr2 175655807 175656108 -77600475 - AluY SINE Alu -8 303 1 516 338 81 9 chr2 175656141 175656475 -77600108 - L3 LINE CR1 -27 1550 1193 201 289 0 0 chr2 175656773 175656825 -77599758 + CT-rich Low_complexity Low_complexity 3 54 0 252 345 18 36 chr2 175657203 175657313 -77599270 - L3 LINE CR1 -405 1172 1065 310 213 13 0 chr2 175657421 175657496 -77599087 + Charlie8 DNA MER1_type 2341 2416 -1 1746 142 4 0 chr2 175657896 175658143 -77598440 + AluSq SINE Alu 1 248 -65 234 0 0 0 chr2 175658146 175658172 -77598411 + (CAA)n Simple_repeat Simple_repeat 2 27 0 400 259 241 12 chr2 175658544 175658706 -77597877 + L3 LINE CR1 1378 1576 -1 1543 192 49 49 chr2 175658848 175659234 -77597349 + MSTD LTR MaLR 11 396 0 184 314 0 0 chr2 175660197 175660248 -77596335 - MIR SINE MIR -6 256 206 2157 78 33 0 chr2 175660734 175661037 -77595546 + AluSg SINE Alu 1 312 0 1807 150 68 14 chr2 175661476 175661769 -77594814 + 7SLRNA srpRNA srpRNA 1 309 -11 195 69 0 0 chr2 175663113 175663142 -77593441 + (ACATG)n Simple_repeat Simple_repeat 4 32 0 3241 255 118 25 chr2 175663459 175664718 -77591865 - L2 LINE L2 0 3313 1906 1569 178 68 37 chr2 175664718 175665072 -77591511 + MLT1A1 LTR MaLR 1 365 0 3241 255 118 25 chr2 175665072 175665258 -77591325 - L2 LINE L2 -1407 1906 1739 216 0 0 0 chr2 175665280 175665304 -77591279 + (TG)n Simple_repeat Simple_repeat 1 24 0 285 29 0 0 chr2 175665655 175665689 -77590894 + (CAT)n Simple_repeat Simple_repeat 2 35 0 206 250 39 0 chr2 175665930 175665982 -77590601 + C-rich Low_complexity Low_complexity 4 57 0 328 305 100 86 chr2 175666079 175666578 -77590005 - L1M2 LINE L1 -5749 1100 595 202 293 0 13 chr2 175666803 175666878 -77589705 + (CG)n Simple_repeat Simple_repeat 2 75 0 1919 159 0 7 chr2 175670337 175670646 -77585937 - AluJo SINE Alu -5 307 1 180 97 0 0 chr2 175671123 175671154 -77585429 + (GA)n Simple_repeat Simple_repeat 1 31 0 864 127 0 8 chr2 175671505 175671631 -77584952 + AluJb SINE Alu 180 304 -8 1536 185 50 14 chr2 175672686 175672983 -77583600 - AluJo SINE Alu -4 308 1 361 298 136 5 chr2 175673153 175673344 -77583239 - MIR SINE MIR 0 262 47 418 246 33 40 chr2 175673396 175673748 -77582835 - L1ME4a LINE L1 -206 5915 5528 1888 169 0 3 chr2 175673775 175674070 -77582513 + AluJb SINE Alu 1 294 -18 342 0 0 0 chr2 175674324 175674362 -77582221 + (TG)n Simple_repeat Simple_repeat 1 38 0 1549 123 131 8 chr2 175674366 175674610 -77581973 - AluSg SINE Alu -36 274 1 3467 150 98 24 chr2 175674925 175675322 -77581261 + L1MB3 LINE L1 5376 5742 -441 2127 169 11 3 chr2 175675322 175675684 -77580899 - MLT1A1 LTR MaLR 0 365 1 3467 150 98 24 chr2 175675684 175676038 -77580545 + L1MB3 LINE L1 5742 6183 0 272 253 0 27 chr2 175677167 175677242 -77579341 + CT-rich Low_complexity Low_complexity 4 76 0 531 211 186 6 chr2 175678561 175678717 -77577866 + MIR SINE MIR 47 230 -32 519 234 74 51 chr2 175679720 175679895 -77576688 + MER97b DNA MER1_type? 1 179 -874 252 252 61 61 chr2 175679995 175680126 -77576457 - MIR3 SINE MIR -27 181 51 1220 171 58 46 chr2 175680252 175680492 -77576091 + AluJo SINE Alu 1 243 -69 374 194 0 101 chr2 175682360 175682499 -77574084 - L1ME3A LINE L1 -19 6151 6027 352 259 28 0 chr2 175683223 175683331 -77573252 - HAL1b LINE L1 -1152 196 86 23 0 0 0 chr2 175683874 175683897 -77572686 + AT_rich Low_complexity Low_complexity 1 23 0 972 194 29 0 chr2 175684060 175684230 -77572353 + FAM SINE Alu 1 175 0 330 245 79 36 chr2 175684502 175684641 -77571942 - L1ME LINE L1 -482 5639 5495 21 0 0 0 chr2 175685757 175685778 -77570805 + AT_rich Low_complexity Low_complexity 1 21 0 1927 205 113 21 chr2 175686586 175687120 -77569463 - MLT2B3 LTR ERVL -8 519 1 773 167 52 35 chr2 175687120 175687292 -77569291 - MLT1A1 LTR MaLR -16 349 175 384 88 0 0 chr2 175687310 175687367 -77569216 + (GA)n Simple_repeat Simple_repeat 1 57 0 533 172 52 15 chr2 175687373 175687507 -77569076 - MLT1A1 LTR MaLR -225 140 2 465 254 132 61 chr2 175687549 175688049 -77568534 - L1ME3A LINE L1 -225 5896 5351 388 183 39 39 chr2 175688273 175688377 -77568206 - HAL1 LINE L1 -1806 701 598 492 281 70 12 chr2 175688414 175688656 -77567927 - HAL1 LINE L1 -2000 507 252 487 214 221 21 chr2 175688665 175688810 -77567773 + MER5A DNA MER1_type 9 182 -7 2349 97 3 0 chr2 175689746 175690055 -77566528 - AluSp SINE Alu -3 310 1 260 299 185 6 chr2 175690109 175690266 -77566317 + MIR SINE MIR 53 237 -25 516 254 55 44 chr2 175690552 175690733 -77565850 - MIR3 SINE MIR -5 203 21 2265 87 3 0 chr2 175691281 175691570 -77565013 + AluY SINE Alu 1 290 -21 667 251 16 11 chr2 175693248 175693431 -77563152 - MIR SINE MIR -1 261 78 951 174 62 0 chr2 175693966 175694144 -77562439 - MER5A DNA MER1_type 0 189 1 2370 94 3 3 chr2 175694286 175694623 -77561960 - AluSp SINE Alu 0 343 7 4551 183 61 30 chr2 175695324 175696817 -77559766 - L1MC2 LINE L1 0 6278 4743 1445 155 43 53 chr2 175697863 175698166 -77558417 - AluJo SINE Alu -12 300 1 1926 267 96 32 chr2 175698519 175700272 -77556311 - L1MC2 LINE L1 -3802 2278 411 288 332 66 13 chr2 175700269 175700495 -77556088 - L1MC2 LINE L1 -5576 494 257 * 192 40 0 0 chr2 175700594 175700619 -77555964 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 7007 45 15 0 chr2 175701783 175702916 -77553667 - L1PA7 LINE L1 -1 6153 5003 321 271 122 0 chr2 175703540 175703647 -77552936 - MIR SINE MIR -138 124 5 305 287 7 59 chr2 175703651 175703787 -77552796 - L2 LINE L2 -44 3269 3141 211 133 40 67 chr2 175703952 175704027 -77552556 + (TATAA)n Simple_repeat Simple_repeat 2 74 0 275 313 26 35 chr2 175704325 175704440 -77552143 + L2 LINE L2 3115 3228 -44 895 230 88 4 chr2 175704444 175704670 -77551913 + MIR SINE MIR 5 249 -13 2580 160 20 4 chr2 175704744 175705194 -77551389 - LTR32 LTR ERVL 0 471 15 435 222 9 9 chr2 175706318 175706426 -77550157 - L1MC/D LINE L1 -2036 5772 5665 229 238 79 30 chr2 175706625 175706726 -77549857 + L2 LINE L2 3200 3305 -8 21 0 0 0 chr2 175706787 175706808 -77549775 + AT_rich Low_complexity Low_complexity 1 21 0 241 116 0 47 chr2 175707424 175707467 -77549116 - L2 LINE L2 -8 3305 3265 180 0 0 0 chr2 175707520 175707540 -77549043 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 227 77 0 26 chr2 175707551 175707590 -77548993 + (GAAA)n Simple_repeat Simple_repeat 1 38 0 829 267 190 8 chr2 175707647 175708036 -77548547 - L2 LINE L2 -254 3059 2588 2713 203 49 30 chr2 175708473 175709173 -77547410 - MER72 LTR ERV1 0 722 10 1680 196 44 11 chr2 175709182 175709545 -77547038 - MER72-int LTR ERV1 0 6758 6384 349 244 49 8 chr2 175709697 175709820 -77546763 - MER84-int LTR ERV1 -500 4454 4327 436 157 17 113 chr2 175711355 175711470 -77545113 - MER84-int LTR ERV1 -4238 3882 3779 210 235 20 0 chr2 175712515 175712566 -77544017 + GA-rich Low_complexity Low_complexity 6 57 0 2247 123 21 21 chr2 175713102 175713475 -77543108 + THE1C LTR MaLR 3 375 0 1208 169 169 15 chr2 175714281 175714542 -77542041 + AluJo SINE Alu 1 301 -1 276 211 75 95 chr2 175714636 175714783 -77541800 - ERVL LTR ERVL -3087 2677 2534 1930 161 3 19 chr2 175715247 175715564 -77541019 + AluJb SINE Alu 1 312 0 2183 246 99 29 chr2 175717069 175717189 -77539394 - L1MD3 LINE L1 -5 8037 7927 225 94 0 0 chr2 175717189 175717221 -77539362 + (TG)n Simple_repeat Simple_repeat 1 32 0 2183 246 99 29 chr2 175717221 175717984 -77538599 - L1MD3 LINE L1 -115 7927 7094 2627 56 3 3 chr2 175718684 175719022 -77537561 + L1PA7 LINE L1 5813 6150 -4 239 333 104 7 chr2 175719653 175719797 -77536786 + MIR3 SINE MIR 45 202 -6 751 190 0 0 chr2 175719931 175720068 -77536515 + FLAM_C SINE Alu 1 137 -6 1514 179 83 12 chr2 175720441 175720766 -77535817 + Tigger3(Golem) DNA MER2_type 2681 3028 -1 302 202 37 64 chr2 175720805 175720914 -77535669 - HAL1 LINE L1 -412 2095 1990 472 300 30 79 chr2 175720918 175721185 -77535398 - MIR SINE MIR -8 254 1 751 294 157 36 chr2 175721242 175721885 -77534698 - HAL1 LINE L1 -616 1891 1171 488 139 69 0 chr2 175721899 175722000 -77534583 - L1ME1 LINE L1 -9 6157 6050 2508 150 0 45 chr2 175722001 175722103 -77534480 + L1MB3 LINE L1 5712 5817 -366 270 0 0 0 chr2 175722103 175722133 -77534450 + (CA)n Simple_repeat Simple_repeat 1 30 0 2508 150 0 45 chr2 175722133 175722524 -77534059 + L1MB3 LINE L1 5817 6183 0 527 264 52 64 chr2 175722563 175722812 -77533771 - HAL1 LINE L1 -1322 1185 942 2330 108 0 0 chr2 175722812 175723118 -77533465 - AluSg SINE Alu -4 306 1 527 264 52 64 chr2 175723118 175723292 -77533291 - HAL1 LINE L1 -1565 942 767 2846 177 58 8 chr2 175723293 175723915 -77532668 - L1MC3 LINE L1 0 7785 7133 264 308 90 39 chr2 175724957 175725113 -77531470 - MIR3 SINE MIR -15 193 30 23 78 0 0 chr2 175726482 175726533 -77530050 + AT_rich Low_complexity Low_complexity 1 51 0 611 308 40 36 chr2 175726586 175726810 -77529773 + MIR SINE MIR 9 233 -29 286 311 57 9 chr2 175726970 175727076 -77529507 - L3 LINE CR1 -154 1423 1313 2102 132 0 6 chr2 175727362 175727711 -77528872 + AluSx SINE Alu 1 312 0 333 292 236 0 chr2 175729100 175729244 -77527339 + MER5B DNA MER1_type 1 178 0 4791 125 10 5 chr2 175729527 175730737 -77525846 - L1PA16 LINE L1 -5 6161 5000 2216 118 3 0 chr2 175730751 175731057 -77525526 - AluSx SINE Alu -1 311 5 217 227 0 0 chr2 175731639 175731683 -77524900 + GA-rich Low_complexity Low_complexity 3 46 0 1851 136 0 52 chr2 175732692 175733001 -77523582 - AluJb SINE Alu -19 293 1 34 42 0 0 chr2 175734979 175735027 -77521556 + AT_rich Low_complexity Low_complexity 1 48 0 411 299 121 24 chr2 175735083 175735290 -77521293 + L3 LINE CR1 1198 1424 -153 1023 191 5 0 chr2 175735338 175735526 -77521057 - MER5A DNA MER1_type 0 189 1 368 300 153 20 chr2 175735540 175735690 -77520893 - MER5A DNA MER1_type -7 182 13 231 348 0 54 chr2 175735699 175735811 -77520772 + L3 LINE CR1 1465 1570 -7 501 244 197 9 chr2 175736639 175736852 -77519731 - MIR SINE MIR -6 256 4 755 213 154 0 chr2 175737113 175737334 -77519249 + LTR50 LTR ERVL 1 255 -540 1623 141 30 30 chr2 175737360 175737611 -77518972 - L1MC1 LINE L1 -5 6328 6075 1192 204 35 108 chr2 175737611 175737883 -77518700 - MSTD LTR MaLR 0 396 165 1653 203 0 3 chr2 175737883 175738174 -77518409 - AluJb SINE Alu -22 290 1 1192 204 35 108 chr2 175738174 175738328 -77518255 - MSTD LTR MaLR -231 165 1 1623 141 30 30 chr2 175738328 175738381 -77518202 - L1MC1 LINE L1 -257 6076 6024 478 167 241 6 chr2 175738526 175738700 -77517883 + LTR50 LTR ERVL 580 794 -1 254 245 196 10 chr2 175738884 175738986 -77517597 + MIR SINE MIR 20 140 -68 240 326 35 35 chr2 175739844 175739985 -77516598 + MIR SINE MIR 96 236 -26 412 282 125 42 chr2 175741169 175741456 -77515127 + L3b LINE CR1 1120 1430 -153 320 206 0 0 chr2 175741463 175741531 -77515052 - L1MD2 LINE L1 -13 6346 6279 2301 95 3 0 chr2 175741694 175741989 -77514594 + AluSx SINE Alu 3 298 -14 312 269 121 7 chr2 175742887 175743028 -77513555 - L1ME4a LINE L1 -31 6090 5934 1025 84 32 0 chr2 175743328 175743483 -77513100 - L1P LINE L1 -2411 3735 3576 285 227 0 0 chr2 175743484 175743550 -77513033 + (GAATG)n Simple_repeat Simple_repeat 2 67 0 1074 99 37 0 chr2 175743552 175743714 -77512869 - L1P LINE L1 -1949 4197 4030 7464 160 16 30 chr2 175743714 175745803 -77510780 - L1P3 LINE L1 -4345 2116 4 248 257 0 10 chr2 175745828 175745929 -77510654 - L1ME4a LINE L1 -2392 5416 5317 269 214 182 58 chr2 175745979 175746133 -77510450 - L1M4 LINE L1 -694 5490 5318 26 50 0 0 chr2 175746553 175746593 -77509990 + AT_rich Low_complexity Low_complexity 1 40 0 357 226 54 0 chr2 175746624 175746717 -77509866 + L1MA9 LINE L1 6176 6273 -39 352 303 95 60 chr2 175746744 175747061 -77509522 + L1ME4a LINE L1 5791 6118 -3 1915 284 109 35 chr2 175747777 175748900 -77507683 + L2 LINE L2 2088 3298 -15 2797 3 0 0 chr2 175749115 175749417 -77507166 - AluYa5 SINE Alu -9 302 1 347 293 115 26 chr2 175749450 175749641 -77506942 + MIR SINE MIR 42 249 -13 491 259 107 18 chr2 175750094 175750318 -77506265 - L1MEc LINE L1 -4577 2144 1901 307 123 175 0 chr2 175750390 175750447 -77506136 + MER7A DNA MER2_type 41 105 -241 664 108 25 50 chr2 175750450 175750570 -77506013 - THE1C LTR MaLR -51 324 208 1182 154 47 26 chr2 175750589 175750823 -77505760 + MER7A DNA MER2_type 99 337 0 568 258 90 40 chr2 175750824 175751048 -77505535 - L1MEc LINE L1 -4685 1855 1643 2137 153 65 19 chr2 175751048 175751461 -77505122 - MSTB1 LTR MaLR 0 432 1 568 258 90 40 chr2 175751461 175751682 -77504901 - L1MEc LINE L1 -4897 1643 1388 691 295 62 50 chr2 175751743 175752289 -77504294 - L1MEc LINE L1 -5445 1085 533 1313 186 7 25 chr2 175752369 175752649 -77503934 - L1MD2 LINE L1 -3 6356 6082 2080 128 6 19 chr2 175752836 175753149 -77503434 - AluSx SINE Alu -3 309 1 253 151 0 75 chr2 175754167 175754220 -77502363 - L2 LINE L2 0 3313 3265 270 188 47 0 chr2 175754519 175754583 -77502000 + MIR SINE MIR 126 192 -70 287 339 0 0 chr2 175755228 175755346 -77501237 + (TA)n Simple_repeat Simple_repeat 1 118 0 233 293 27 27 chr2 175755353 175755428 -77501155 - MIR SINE MIR -122 140 66 22 35 0 0 chr2 175755646 175755675 -77500908 + AT_rich Low_complexity Low_complexity 1 29 0 2361 88 0 0 chr2 175759507 175759812 -77496771 + AluSc SINE Alu 1 305 -4 2129 204 65 25 chr2 175760176 175760320 -77496263 - MER45C DNA AcHobo -631 950 813 1877 164 13 19 chr2 175760320 175760630 -77495953 - AluJo SINE Alu -4 308 1 2129 204 65 25 chr2 175760630 175760975 -77495608 - MER45C DNA AcHobo -768 813 441 976 198 10 20 chr2 175761135 175761337 -77495246 - MER45C DNA AcHobo -738 215 16 335 300 79 29 chr2 175761555 175761695 -77494888 + MIR SINE MIR 45 191 -71 440 17 0 17 chr2 175762502 175762560 -77494023 + (CA)n Simple_repeat Simple_repeat 2 58 0 21 36 0 0 chr2 175763501 175763529 -77493054 + AT_rich Low_complexity Low_complexity 1 28 0 535 309 160 26 chr2 175763531 175764075 -77492508 + HAL1b LINE L1 281 897 -451 1553 174 37 79 chr2 175764456 175764863 -77491720 + MLT1B LTR MaLR 1 390 0 23 33 0 0 chr2 175765659 175765689 -77490894 + AT_rich Low_complexity Low_complexity 1 30 0 402 21 0 0 chr2 175765873 175765920 -77490663 + (TG)n Simple_repeat Simple_repeat 2 48 0 345 261 0 0 chr2 175766128 175766216 -77490367 - L1MA9 LINE L1 -38 6274 6187 232 314 45 37 chr2 175766227 175766469 -77490114 + L1MC4a LINE L1 3545 3788 -2358 430 279 52 52 chr2 175766940 175767023 -77489560 + L1MC4a LINE L1 4287 4369 -1777 1638 185 3 32 chr2 175767023 175767337 -77489246 + AluJb SINE Alu 1 305 -7 430 279 52 52 chr2 175767337 175767482 -77489101 + L1MC4a LINE L1 4368 4515 -1631 1114 285 89 31 chr2 175767719 175768728 -77487855 + L1MC4a LINE L1 4927 5395 -751 2373 77 0 0 chr2 175768738 175769035 -77487548 + AluY SINE Alu 1 297 -14 1284 172 37 84 chr2 175769461 175769844 -77486739 - MLT1A1 LTR MaLR 0 365 1 180 0 0 0 chr2 175769885 175769905 -77486678 + (TA)n Simple_repeat Simple_repeat 2 21 0 1866 142 111 15 chr2 175770145 175770477 -77486106 - THE1B LTR MaLR 0 364 1 311 122 0 20 chr2 175770563 175770612 -77485971 - MIR SINE MIR -56 152 105 189 0 0 0 chr2 175770923 175770944 -77485639 + (TTG)n Simple_repeat Simple_repeat 1 21 0 223 317 174 36 chr2 175771824 175771991 -77484592 + L3b LINE CR1 1380 1569 -14 1180 219 43 101 chr2 175772400 175772916 -77483667 - LTR5 LTR ERVK 0 969 484 380 225 238 0 chr2 175773256 175773383 -77483200 - MER5A DNA MER1_type -23 166 4 2445 72 0 0 chr2 175773665 175773958 -77482625 + AluY SINE Alu 1 293 -18 302 357 23 23 chr2 175775394 175775565 -77481018 - MER5B DNA MER1_type -1 177 7 27 29 0 0 chr2 175776156 175776190 -77480393 + AT_rich Low_complexity Low_complexity 1 34 0 1231 203 121 7 chr2 175777494 175777800 -77478783 - MER58B DNA MER1_type 0 341 1 1218 194 167 3 chr2 175779199 175779528 -77477055 - MLT1B LTR MaLR -7 383 1 444 316 86 21 chr2 175779867 175780101 -77476482 + MIR SINE MIR 8 256 -6 282 309 39 45 chr2 175780851 175781029 -77475554 + MIR SINE MIR 50 226 -36 1207 121 0 15 chr2 175781827 175782025 -77474558 - L1MA2 LINE L1 -4 6300 6106 400 259 72 43 chr2 175782496 175782635 -77473948 - MIR SINE MIR -72 190 48 220 156 16 47 chr2 175782664 175782728 -77473855 + (TATAA)n Simple_repeat Simple_repeat 2 63 0 345 333 57 14 chr2 175782919 175783060 -77473523 + L2 LINE L2 3126 3272 0 445 163 0 0 chr2 175783256 175783342 -77473241 + L1PB1 LINE L1 6053 6138 -13 24 32 0 0 chr2 175783617 175783648 -77472935 + AT_rich Low_complexity Low_complexity 1 31 0 405 0 0 0 chr2 175784522 175784567 -77472016 + (TG)n Simple_repeat Simple_repeat 2 46 0 347 292 7 51 chr2 175784690 175784827 -77471756 + MIR SINE MIR 118 248 -14 202 286 135 39 chr2 175785242 175785386 -77471197 + MIR SINE MIR 67 233 -29 1628 122 100 61 chr2 175785386 175785747 -77470836 - THE1C LTR MaLR 0 375 1 202 286 135 39 chr2 175785747 175785780 -77470803 + MIR SINE MIR 233 261 -1 240 275 107 61 chr2 175785942 175786073 -77470510 + L2 LINE L2 2909 3045 -227 448 263 187 0 chr2 175786105 175786276 -77470307 - L2 LINE L2 -1741 1573 1371 235 319 0 0 chr2 175786520 175786592 -77469991 - L2 LINE L2 -1 3312 3241 426 141 33 99 chr2 175786721 175786842 -77469741 - L1MC4 LINE L1 0 8042 7930 207 100 0 0 chr2 175786887 175786917 -77469666 + (CATA)n Simple_repeat Simple_repeat 2 31 0 2433 254 187 7 chr2 175786959 175788007 -77468576 - L2 LINE L2 -779 2535 1299 21 36 0 0 chr2 175789091 175789119 -77467464 + AT_rich Low_complexity Low_complexity 1 28 0 375 208 36 2 chr2 175789200 175789304 -77467279 - L1MC5 LINE L1 0 8042 7838 237 276 109 40 chr2 175789887 175790061 -77466522 + L2 LINE L2 2791 2976 -338 635 293 111 35 chr2 175790280 175791174 -77465409 - L1MEd LINE L1 -4044 2266 1441 2222 125 0 0 chr2 175791174 175791470 -77465113 - AluSx SINE Alu -16 296 1 635 293 111 35 chr2 175791470 175792099 -77464484 - L1MEd LINE L1 -4869 1441 565 232 317 285 5 chr2 175794095 175794281 -77462302 - MIR SINE MIR -7 255 18 295 318 109 0 chr2 175795427 175795537 -77461046 - L2 LINE L2 0 3313 3192 310 358 44 7 chr2 175795570 175795707 -77460876 + MIR SINE MIR 3 144 -118 1354 159 0 10 chr2 175796147 175796354 -77460229 - AluJb SINE Alu -24 288 84 380 345 40 10 chr2 175796838 175797038 -77459545 + MIR SINE MIR 51 256 -6 1884 155 9 25 chr2 175797040 175797357 -77459226 + AluSx SINE Alu 1 312 0 28 71 0 0 chr2 175797858 175797914 -77458669 + AT_rich Low_complexity Low_complexity 1 56 0 214 235 20 0 chr2 175798026 175798077 -77458506 - MIR SINE MIR -8 254 203 1403 182 47 25 chr2 175798096 175798371 -77458212 - AluJo SINE Alu -31 281 1 3585 143 32 34 chr2 175798378 175798902 -77457681 - L1MB3 LINE L1 -2 6181 5658 180 0 0 0 chr2 175798902 175798922 -77457661 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1600 164 48 4 chr2 175798922 175799191 -77457392 - AluSx SINE Alu -31 281 1 3585 143 32 34 chr2 175799191 175799372 -77457211 - L1MB3 LINE L1 -523 5660 5476 283 294 188 12 chr2 175799440 175799600 -77456983 - MIR SINE MIR -56 206 19 24 0 0 0 chr2 175799785 175799809 -77456774 + AT_rich Low_complexity Low_complexity 1 24 0 243 238 0 36 chr2 175799996 175800080 -77456503 - L1ME LINE L1 -440 5681 5601 552 285 6 45 chr2 175800846 175801025 -77455558 - MIR SINE MIR -18 244 73 226 271 65 55 chr2 175801160 175801359 -77455224 - L1ME LINE L1 -304 5817 5617 1836 212 45 45 chr2 175802972 175803477 -77453106 - MLT1D LTR MaLR 0 505 1 275 0 29 0 chr2 175803678 175803713 -77452870 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 1832 137 11 11 chr2 175804467 175804744 -77451839 + AluJo SINE Alu 14 290 -22 270 227 45 0 chr2 175804744 175804810 -77451773 - L2 LINE L2 -2 3270 3202 975 92 0 0 chr2 175806118 175806248 -77450335 + FLAM_C SINE Alu 1 130 -3 1774 145 80 7 chr2 175806707 175806983 -77449600 - AluSg SINE Alu -14 296 1 2241 152 37 48 chr2 175807246 175807708 -77448875 - LTR32 LTR ERVL 0 471 15 189 0 0 0 chr2 175810342 175810363 -77446220 + (TC)n Simple_repeat Simple_repeat 2 22 0 2331 79 0 0 chr2 175810363 175810655 -77445928 - AluY SINE Alu -19 292 1 2183 113 7 0 chr2 175811708 175812001 -77444582 - AluSx SINE Alu -17 295 1 180 0 0 0 chr2 175814542 175814562 -77442021 + (TG)n Simple_repeat Simple_repeat 2 21 0 339 269 0 0 chr2 175814566 175814644 -77441939 + MER58 DNA MER1_type 1 78 -137 2467 120 50 26 chr2 175814644 175815062 -77441521 + MSTA LTR MaLR 1 428 0 8576 139 32 43 chr2 175815062 175816543 -77440040 + MSTA-int LTR MaLR 1 1465 -186 629 152 0 0 chr2 175816543 175816648 -77439935 - U6 snRNA snRNA -2 105 1 8576 139 32 43 chr2 175816648 175816832 -77439751 + MSTA-int LTR MaLR 1465 1649 -2 2621 99 48 14 chr2 175816834 175817248 -77439335 + MSTA LTR MaLR 1 428 0 462 212 20 0 chr2 175817315 175817414 -77439169 + MER58 DNA MER1_type 2320 2420 0 2376 99 0 0 chr2 175817528 175817831 -77438752 - AluSc SINE Alu -6 303 1 2328 197 98 32 chr2 175818195 175818990 -77437593 - L1MB8 LINE L1 -174 6004 5167 493 200 33 0 chr2 175819352 175819442 -77437141 - FRAM SINE Alu -83 93 1 2498 70 0 0 chr2 175820126 175820428 -77436155 - AluY SINE Alu -9 302 1 278 301 80 9 chr2 175820505 175820618 -77435965 + L2 LINE L2 3190 3310 -3 21 0 0 0 chr2 175820722 175820743 -77435840 + AT_rich Low_complexity Low_complexity 1 21 0 2250 126 0 3 chr2 175820950 175821260 -77435323 - AluSx SINE Alu -3 309 1 229 219 0 0 chr2 175821528 175821569 -77435014 + Charlie8 DNA MER1_type 1388 1428 -989 21 57 0 0 chr2 175821871 175821906 -77434677 + AT_rich Low_complexity Low_complexity 1 35 0 644 271 84 15 chr2 175822188 175822391 -77434192 - MIR SINE MIR 0 262 46 353 309 9 0 chr2 175824383 175824493 -77432090 + (CATATA)n Simple_repeat Simple_repeat 4 114 0 13966 188 33 13 chr2 175824570 175830163 -77426420 + L1PB1 LINE L1 616 6508 -359 447 19 0 0 chr2 175830163 175830215 -77426368 + (CA)n Simple_repeat Simple_repeat 1 52 0 13966 188 33 13 chr2 175830215 175830583 -77426000 + L1PB1 LINE L1 6508 6867 0 269 239 56 0 chr2 175830672 175830743 -77425840 - MIR SINE MIR -70 192 118 1770 144 0 0 chr2 175830912 175831168 -77425415 - AluJo SINE Alu -10 302 47 1485 118 36 0 chr2 175832310 175832531 -77424052 + MER30 DNA MER1_type 2 230 0 484 231 75 0 chr2 175833358 175833492 -77423091 + L1MA9 LINE L1 5941 6084 -228 405 198 26 9 chr2 175833508 175833624 -77422959 + L1MA9 LINE L1 6195 6312 0 578 313 107 30 chr2 175834499 175834732 -77421851 + MIR SINE MIR 12 262 0 860 215 39 73 chr2 175836158 175836418 -77420165 + MIR SINE MIR 3 253 -9 188 337 122 0 chr2 175836816 175836914 -77419669 + MIR SINE MIR 20 129 -79 353 324 32 36 chr2 175836960 175837213 -77419370 - HAL1 LINE L1 -2254 253 2 389 314 126 49 chr2 175837433 175838022 -77418561 - HAL1b LINE L1 -646 702 69 234 250 67 0 chr2 175839466 175839526 -77417057 - Charlie8 DNA MER1_type -991 1426 1363 206 281 11 56 chr2 175839589 175839678 -77416905 - MIR3 SINE MIR -37 171 87 705 210 134 0 chr2 175839695 175839852 -77416731 - MER45A DNA AcHobo 0 178 1 2365 90 0 3 chr2 175839963 175840263 -77416320 - AluYa5 SINE Alu -12 299 1 276 30 0 0 chr2 175840449 175840482 -77416101 + (CA)n Simple_repeat Simple_repeat 2 34 0 419 84 84 12 chr2 175841530 175841697 -77414886 + (TA)n Simple_repeat Simple_repeat 1 179 0 364 108 78 6 chr2 175841717 175841884 -77414699 + (TA)n Simple_repeat Simple_repeat 2 180 0 295 67 108 8 chr2 175841936 175842056 -77414527 + (TA)n Simple_repeat Simple_repeat 1 132 0 25 0 0 0 chr2 175843310 175843335 -77413248 + AT_rich Low_complexity Low_complexity 1 25 0 474 288 19 34 chr2 175843480 175843685 -77412898 - MIR3 SINE MIR -4 204 3 26 30 0 0 chr2 175843791 175843824 -77412759 + AT_rich Low_complexity Low_complexity 1 33 0 2140 116 0 0 chr2 175844552 175844859 -77411724 - AluSx SINE Alu 0 308 2 267 179 77 13 chr2 175844951 175845029 -77411554 - LTR50 LTR ERVL -2 793 711 777 223 174 34 chr2 175845285 175845709 -77410874 - LTR50 LTR ERVL -141 654 82 299 283 18 9 chr2 175845772 175845885 -77410698 + MER112 DNA MER1_type 129 242 -18 331 296 23 0 chr2 175846306 175846394 -77410189 - MIR3 SINE MIR -29 179 90 224 296 191 26 chr2 175846561 175846676 -77409907 + MIR3 SINE MIR 34 167 -41 430 281 78 20 chr2 175847044 175847197 -77409386 + MIR3 SINE MIR 39 200 -8 2092 110 0 23 chr2 175847344 175847645 -77408938 + AluSg SINE Alu 2 295 -15 21 82 0 0 chr2 175848005 175848054 -77408529 + AT_rich Low_complexity Low_complexity 1 49 0 614 91 15 91 chr2 175848516 175848648 -77407935 + L1MA4 LINE L1 6173 6294 -6 303 258 92 58 chr2 175850276 175850396 -77406187 + L1ME3 LINE L1 6010 6133 -29 180 342 13 13 chr2 175850586 175850662 -77405921 - L2 LINE L2 -1 3312 3237 194 397 176 15 chr2 175850736 175850867 -77405716 - L2 LINE L2 -4 3268 3117 1350 170 121 4 chr2 175852238 175852503 -77404080 + AluJb SINE Alu 1 296 -6 983 218 160 0 chr2 175853803 175854097 -77402486 - MLT1D LTR MaLR -164 341 1 2448 85 3 0 chr2 175854959 175855264 -77401319 + AluSg SINE Alu 1 306 -4 243 0 0 0 chr2 175855264 175855291 -77401292 + (TA)n Simple_repeat Simple_repeat 2 28 0 * 432 0 0 0 chr2 175855290 175855338 -77401245 + (GA)n Simple_repeat Simple_repeat 2 49 0 34 18 0 36 chr2 175855652 175855685 -77400898 + AT_rich Low_complexity Low_complexity 1 33 -21 12796 184 27 6 chr2 175855685 175859190 -77397393 - L1PA14 LINE L1 -5 6156 2597 34 18 0 36 chr2 175859190 175859212 -77397371 + AT_rich Low_complexity Low_complexity 33 54 0 251 272 224 0 chr2 175859349 175859474 -77397109 - MIR SINE MIR -75 187 35 1806 133 78 39 chr2 175861591 175861952 -77394631 - THE1C LTR MaLR 0 375 1 2041 133 20 0 chr2 175864414 175864715 -77391868 + AluSq SINE Alu 1 307 -6 192 306 81 81 chr2 175865007 175865118 -77391465 - MIR SINE MIR -73 135 25 4284 187 36 12 chr2 175865153 175866137 -77390446 + L1MA9 LINE L1 5266 6272 -40 6002 125 136 115 chr2 175866489 175868153 -77388430 - pTR5 LTR ERV1 0 2438 741 698 256 26 21 chr2 175868153 175868344 -77388239 + MIR SINE MIR 1 192 -70 684 254 132 18 chr2 175868771 175868991 -77387592 - MIR SINE MIR -3 259 15 317 324 20 29 chr2 175869861 175869963 -77386620 + L2 LINE L2 3150 3250 -22 2303 83 0 10 chr2 175872594 175872895 -77383688 + AluSq SINE Alu 1 298 -15 942 122 8 0 chr2 175873564 175873695 -77382888 - FLAM_C SINE Alu -11 132 1 203 171 0 0 chr2 175873975 175874016 -77382567 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 634 279 85 50 chr2 175874304 175874528 -77382055 + MLT1J LTR MaLR 113 357 -154 4375 65 2 0 chr2 175874528 175875080 -77381503 - MER41A LTR ERV1 -1 553 1 634 279 85 50 chr2 175875080 175875232 -77381351 + MLT1J LTR MaLR 357 502 -9 187 200 36 18 chr2 175875622 175875677 -77380906 - MIR SINE MIR -83 179 124 416 267 121 29 chr2 175875705 175875911 -77380672 + L2 LINE L2 3080 3304 -9 312 347 0 21 chr2 175875917 175876012 -77380571 - MIR SINE MIR -169 93 1 3164 158 71 40 chr2 175876080 175876100 -77380483 - L1MC2 LINE L1 0 6344 6326 351 0 0 0 chr2 175876100 175876139 -77380444 + (TG)n Simple_repeat Simple_repeat 2 40 0 3164 158 71 40 chr2 175876139 175876821 -77379762 - L1MC2 LINE L1 -18 6326 5620 181 279 63 38 chr2 175877751 175877830 -77378753 + L2 LINE L2 2404 2484 -830 295 309 61 45 chr2 175878285 175878531 -77378052 + L2 LINE L2 2265 2514 -800 1980 139 0 23 chr2 175878592 175878901 -77377682 - AluSx SINE Alu -10 302 1 892 258 68 80 chr2 175879172 175879672 -77376911 - MLT1J LTR MaLR -3 508 15 737 252 32 86 chr2 175880800 175881114 -77375469 + L2 LINE L2 3002 3298 -15 2063 113 0 21 chr2 175881128 175881412 -77375171 - AluSc SINE Alu -31 278 1 397 307 84 39 chr2 175883680 175883859 -77372724 - MIR3 SINE MIR -21 187 1 3902 195 87 63 chr2 175884949 175885107 -77371476 - Charlie1a DNA MER1_type -1306 1455 1302 2017 102 11 4 chr2 175885107 175885417 -77371166 - AluSc SINE Alu 0 314 3 3902 195 87 63 chr2 175885417 175885450 -77371133 - Charlie1a DNA MER1_type -1459 1302 1271 1932 142 0 3 chr2 175885450 175885752 -77370831 + AluJb SINE Alu 1 301 0 3902 195 87 63 chr2 175885752 175885834 -77370749 - Charlie1a DNA MER1_type -1490 1271 1192 2353 101 0 0 chr2 175885834 175886132 -77370451 - AluSc SINE Alu -11 298 1 3902 195 87 63 chr2 175886132 175887135 -77369448 - Charlie1a DNA MER1_type -1569 1192 145 3944 56 6 23 chr2 175887169 175887645 -77368938 - L1PA7 LINE L1 0 6154 5686 2378 94 3 0 chr2 175887645 175887944 -77368639 - AluSp SINE Alu -13 300 1 3944 56 6 23 chr2 175887944 175887987 -77368596 - L1PA7 LINE L1 -468 5686 5644 2261 47 0 3 chr2 175887987 175888284 -77368299 + L1P3 LINE L1 5289 5584 -570 620 227 47 7 chr2 175888286 175888436 -77368147 - Charlie1a DNA MER1_type -1299 156 1 3673 156 35 9 chr2 175888935 175889619 -77366964 + L1MA6 LINE L1 5598 6299 -1 225 315 114 71 chr2 175890590 175890722 -77365861 + L2 LINE L2 2938 3063 -209 985 198 164 46 chr2 175890722 175891046 -77365537 + MLT1A1 LTR MaLR 1 362 -3 225 315 114 71 chr2 175891046 175891221 -77365362 + L2 LINE L2 3063 3258 -14 3825 133 35 1 chr2 175891668 175892327 -77364256 - L1MA5 LINE L1 -24 6276 5596 321 251 80 96 chr2 175892376 175892627 -77363956 - L1ME4a LINE L1 -6 6115 5869 23 0 0 0 chr2 175893170 175893193 -77363390 + AT_rich Low_complexity Low_complexity 1 23 0 411 188 12 0 chr2 175893298 175893378 -77363205 - L1ME4a LINE L1 -493 5628 5548 348 273 63 28 chr2 175893485 175893628 -77362955 - L1ME4a LINE L1 -754 5392 5245 979 224 21 63 chr2 175896194 175896529 -77360054 - MLT1B LTR MaLR -4 386 66 186 43 0 0 chr2 175896550 175896573 -77360010 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 231 314 28 33 chr2 175896836 175896951 -77359632 + MIR SINE MIR 5 121 -87 236 228 18 0 chr2 175897063 175897120 -77359463 - MLT1J LTR MaLR -66 445 388 394 219 24 0 chr2 175897544 175897626 -77358957 + MER5A DNA MER1_type 11 94 -95 200 225 0 0 chr2 175897734 175897774 -77358809 + MIR SINE MIR 173 212 -50 1683 191 3 7 chr2 175897858 175898140 -77358443 - AluJb SINE Alu -20 292 12 623 100 160 0 chr2 175898481 175898581 -77358002 + AluSc SINE Alu 182 297 -12 33 25 0 0 chr2 175899600 175899640 -77356943 + AT_rich Low_complexity Low_complexity 1 40 0 238 241 51 25 chr2 175899719 175899798 -77356785 - MIR SINE MIR -70 192 112 614 322 84 0 chr2 175900044 175900271 -77356312 + MIR SINE MIR 9 254 -8 327 255 21 78 chr2 175903323 175903464 -77353119 + MIR SINE MIR 73 205 -57 861 138 7 7 chr2 175903836 175903988 -77352595 - MLT1A1 LTR MaLR -213 152 1 204 250 0 50 chr2 175904414 175904474 -77352109 - MIR SINE MIR -92 170 114 185 276 219 41 chr2 175904441 175904564 -77352019 - MIR3 SINE MIR -61 147 3 * 990 172 98 23 chr2 175906036 175906251 -77350332 + MER46A DNA MER2_type 3 233 -3 1463 201 91 15 chr2 175906666 175907005 -77349578 - MLT1A1 LTR MaLR 0 365 1 200 300 0 0 chr2 175907560 175907610 -77348973 - L2 LINE L2 -10 3262 3213 180 292 45 56 chr2 175907720 175907809 -77348774 - MIR SINE MIR -131 131 44 251 150 0 0 chr2 175908116 175908156 -77348427 - MSTA LTR MaLR 0 428 389 457 165 0 34 chr2 175908157 175908413 -77348170 + AluJb SINE Alu 1 312 0 2192 106 46 30 chr2 175908420 175908815 -77347768 - MSTA LTR MaLR -27 401 1 921 228 72 17 chr2 175910770 175911007 -77345576 + MIR SINE MIR 2 251 -11 896 251 87 49 chr2 175911018 175911408 -77345175 + MLT1I LTR MaLR 5 409 0 1243 200 75 21 chr2 175911480 175911760 -77344823 + Charlie1a DNA MER1_type 8 302 -1153 1276 94 26 149 chr2 175911760 175911872 -77344711 + MER2 DNA MER2_type 2 126 -219 792 167 8 0 chr2 175911872 175912004 -77344579 + FLAM_C SINE Alu 1 133 0 1276 94 26 149 chr2 175912004 175912200 -77344383 + MER2 DNA MER2_type 126 272 -73 359 223 96 11 chr2 175912227 175912321 -77344262 + MER2 DNA MER2_type 242 343 -2 4037 184 111 17 chr2 175912323 175913380 -77343203 + Charlie1a DNA MER1_type 300 1455 0 2285 91 0 3 chr2 175913433 175913729 -77342854 + AluSx SINE Alu 12 306 -6 2160 87 30 7 chr2 175914746 175915045 -77341538 - AluSc SINE Alu -3 306 1 486 299 52 11 chr2 175915208 175915382 -77341201 + MIR SINE MIR 11 191 -71 192 40 0 0 chr2 175915516 175915541 -77341042 + (CAAAAA)n Simple_repeat Simple_repeat 4 28 0 871 186 6 0 chr2 175916985 175917146 -77339437 - MER58B DNA MER1_type -11 330 169 25 51 0 0 chr2 175920422 175920461 -77336122 + AT_rich Low_complexity Low_complexity 1 39 0 2171 117 7 0 chr2 175921599 175921897 -77334686 + AluSx SINE Alu 1 300 -12 1017 300 55 57 chr2 175922830 175923320 -77333263 + L2 LINE L2 2823 3311 -2 316 203 0 14 chr2 175923848 175923922 -77332661 + L1PA16 LINE L1 6078 6150 -16 2130 166 11 6 chr2 175924084 175924446 -77332137 - MLT1A1 LTR MaLR -1 364 1 671 202 0 0 chr2 175924831 175924955 -77331628 + MLT1A1 LTR MaLR 150 273 -92 199 375 117 0 chr2 175924969 175925089 -77331494 + L2 LINE L2 3139 3272 0 1013 195 16 0 chr2 175928483 175928668 -77327915 + MER5A DNA MER1_type 1 188 -1 577 321 176 13 chr2 175928738 175929187 -77327396 - L3 LINE CR1 -857 720 199 240 346 47 9 chr2 175929243 175929350 -77327233 - L2 LINE L2 -8 3264 3154 797 186 64 79 chr2 175929943 175930088 -77326495 - MER33 DNA MER1_type -2261 324 178 2004 111 31 10 chr2 175930088 175930377 -77326206 - AluSx SINE Alu -17 295 1 797 186 64 79 chr2 175930377 175930559 -77326024 - MER33 DNA MER1_type -2407 178 2 583 270 155 9 chr2 175930667 175930893 -77325690 + MIR SINE MIR 2 260 -2 766 181 124 34 chr2 175931074 175931251 -77325332 + Tigger3(Golem) DNA MER2_type 1 193 -2836 2122 176 26 2 chr2 175931251 175931678 -77324905 - L1MB7 LINE L1 -174 6010 5574 222 62 0 0 chr2 175931685 175931717 -77324866 + (TTTTTG)n Simple_repeat Simple_repeat 4 35 0 1768 179 0 4 chr2 175931787 175932067 -77324516 - AluJo SINE Alu -33 279 1 1356 193 41 56 chr2 175932067 175932679 -77323904 - L1MB7 LINE L1 -589 5585 4904 516 365 23 0 chr2 175933352 175933571 -77323012 - L3 LINE CR1 -105 1472 1249 4610 135 64 62 chr2 175934151 175935610 -77320973 - pTR5 LTR ERV1 0 2438 66 252 292 118 21 chr2 175936703 175936847 -77319736 + MIR SINE MIR 41 198 -64 2347 84 0 3 chr2 175937415 175937712 -77318871 + AluSc SINE Alu 1 296 -13 946 234 33 0 chr2 175938182 175938396 -77318187 + MER58A DNA MER1_type 1 221 -3 1918 88 12 0 chr2 175938535 175938775 -77317808 - AluSx SINE Alu -10 302 60 2320 88 0 13 chr2 175938871 175939178 -77317405 + AluSx SINE Alu 1 303 -9 205 235 20 0 chr2 175940034 175940085 -77316498 - L2 LINE L2 -21 3251 3200 188 180 66 66 chr2 175940101 175940162 -77316421 + L2 LINE L2 3252 3312 -1 21 0 0 0 chr2 175941067 175941088 -77315495 + AT_rich Low_complexity Low_complexity 1 21 0 180 254 68 17 chr2 175944063 175944122 -77312461 - L2 LINE L2 -1311 2003 1942 201 154 0 0 chr2 175944687 175944726 -77311857 + (CA)n Simple_repeat Simple_repeat 2 40 0 1948 156 3 28 chr2 175945738 175946058 -77310525 + AluJo SINE Alu 1 312 0 808 193 0 56 chr2 175946071 175946232 -77310351 + AluJo SINE Alu 1 152 -160 1322 142 42 54 chr2 175946480 175946741 -77309842 - AluJo SINE Alu -21 291 34 251 161 32 89 chr2 175948126 175948250 -77308333 + L1MC5 LINE L1 7795 7911 -50 1891 104 7 78 chr2 175949045 175949354 -77307229 - AluSx SINE Alu -23 289 3 212 340 113 0 chr2 175949408 175949514 -77307069 - L2 LINE L2 -236 3036 2919 211 169 51 17 chr2 175949756 175949815 -77306768 + T-rich Low_complexity Low_complexity 4 64 0 1693 88 180 0 chr2 175949898 175950148 -77306435 - AluSx SINE Alu -17 295 1 400 356 68 40 chr2 175950512 175950790 -77305793 - L2 LINE L2 -1 3271 2986 239 344 41 49 chr2 175950987 175951231 -77305352 - L2 LINE L2 -684 2630 2389 * 411 280 89 36 chr2 175951224 175951392 -77305191 + MIR SINE MIR 11 187 -75 258 286 174 0 chr2 175951419 175951517 -77305066 - L2 LINE L2 -929 2385 2271 198 0 0 0 chr2 175951521 175951543 -77305040 + (A)n Simple_repeat Simple_repeat 1 22 0 1209 93 192 0 chr2 175951572 175951765 -77304818 + MER30 DNA MER1_type 1 230 0 396 347 84 18 chr2 175952804 175953029 -77303554 - L2 LINE L2 -351 2963 2724 645 179 0 0 chr2 175953296 175953419 -77303164 + (TATG)n Simple_repeat Simple_repeat 2 124 0 1275 131 11 5 chr2 175953501 175953692 -77302891 + AluJb SINE Alu 1 192 -120 21 0 0 0 chr2 175954003 175954024 -77302559 + AT_rich Low_complexity Low_complexity 1 21 0 2457 60 0 28 chr2 175954134 175954453 -77302130 - AluY SINE Alu -1 310 1 790 174 47 35 chr2 175955012 175955184 -77301399 + MER5B DNA MER1_type 2 175 -3 2443 68 0 0 chr2 175955395 175955688 -77300895 - AluY SINE Alu -18 293 1 739 287 56 18 chr2 175955742 175956028 -77300555 - MER115 DNA AcHobo -9 684 388 268 284 168 30 chr2 175956143 175956340 -77300243 - MER115 DNA AcHobo -442 251 28 414 0 0 0 chr2 175956923 175956969 -77299614 + (TA)n Simple_repeat Simple_repeat 1 46 0 244 175 53 0 chr2 175957023 175957080 -77299503 - L1ME4a LINE L1 -2 6119 6060 1278 161 0 33 chr2 175957228 175957439 -77299144 + AluJo SINE Alu 85 288 -24 268 258 72 10 chr2 175957457 175957554 -77299029 - L1ME4a LINE L1 -236 5885 5783 427 298 65 40 chr2 175957566 175957814 -77298769 - L1ME4a LINE L1 -391 5730 5477 222 128 0 0 chr2 175957968 175958007 -77298576 + (CA)n Simple_repeat Simple_repeat 2 40 0 233 213 0 50 chr2 175958081 175958161 -77298422 - L1ME4a LINE L1 -691 5430 5355 28 0 0 0 chr2 175958523 175958551 -77298032 + AT_rich Low_complexity Low_complexity 1 28 0 453 191 12 24 chr2 175959765 175959849 -77296734 - AluJo SINE Alu -143 169 87 2231 149 61 25 chr2 175959878 175960322 -77296261 - MER66B LTR ERV1 0 486 27 1128 274 102 15 chr2 175960475 175961005 -77295578 - L1ME4a LINE L1 -9 6112 5537 667 211 49 8 chr2 175962304 175962427 -77294156 + FLAM_A SINE Alu 1 128 -5 351 0 0 0 chr2 175962427 175962466 -77294117 + (TG)n Simple_repeat Simple_repeat 2 40 0 463 314 59 7 chr2 175963208 175963361 -77293222 - MIR3 SINE MIR -18 190 30 1612 148 23 59 chr2 175964913 175965217 -77291366 - AluJo SINE Alu -19 293 1 549 231 30 130 chr2 175966897 175967166 -77289417 + MIR SINE MIR 21 262 0 285 345 0 0 chr2 175967183 175967267 -77289316 + MIR SINE MIR 161 244 -18 937 128 0 0 chr2 175967747 175967872 -77288711 + FLAM_C SINE Alu 1 125 -18 690 185 71 62 chr2 175970098 175970277 -77286306 - L1ME3 LINE L1 0 6162 5979 3171 85 52 5 chr2 175970277 175970701 -77285882 - MLT2A1 LTR ERVL 0 444 1 690 185 71 62 chr2 175970701 175970732 -77285851 - L1ME3 LINE L1 -183 5979 5950 2497 18 0 7 chr2 175970882 175971204 -77285379 - AluY SINE Alu 0 320 1 30 0 0 0 chr2 175972023 175972053 -77284530 + AT_rich Low_complexity Low_complexity 1 30 0 2115 92 4 0 chr2 175972056 175972327 -77284256 + L1PA8 LINE L1 5895 6166 -6 259 291 25 0 chr2 175972495 175972574 -77284009 - L1M4 LINE L1 -2005 4141 4061 1716 158 13 23 chr2 175973019 175973322 -77283261 - AluJo SINE Alu -12 300 1 2041 122 0 62 chr2 175973388 175973709 -77282874 - AluSx SINE Alu -11 301 1 21 0 0 0 chr2 175973769 175973790 -77282793 + AT_rich Low_complexity Low_complexity 1 21 0 2430 80 0 0 chr2 175974287 175974587 -77281996 - AluY SINE Alu -9 302 3 2709 162 113 4 chr2 175974996 175975508 -77281075 + L1MB3 LINE L1 5615 6182 -1 1929 120 14 11 chr2 175978362 175978680 -77277903 - AluSp SINE Alu 0 319 1 2358 106 3 0 chr2 175978771 175979082 -77277501 + AluSx SINE Alu 1 312 0 23 0 0 0 chr2 175985566 175985589 -77270994 + AT_rich Low_complexity Low_complexity 1 23 0 986 174 84 42 chr2 175986074 175986287 -77270296 - MSTD LTR MaLR 0 396 175 40 16 0 32 chr2 175986711 175986750 -77269833 + AT_rich Low_complexity Low_complexity 1 39 -21 1539 193 7 7 chr2 175986750 175987030 -77269553 - AluJo SINE Alu -32 280 1 40 16 0 32 chr2 175987030 175987052 -77269531 + AT_rich Low_complexity Low_complexity 39 60 0 551 241 43 32 chr2 175987059 175987246 -77269337 - LTR33 LTR ERVL -4 517 329 257 286 111 16 chr2 175987299 175987425 -77269158 - LTR33 LTR ERVL -327 194 57 266 300 14 0 chr2 175987469 175987539 -77269044 + L2 LINE L2 3202 3272 0 464 287 17 0 chr2 175988025 175988140 -77268443 - L2 LINE L2 0 3313 3197 6043 125 20 16 chr2 175988150 175989109 -77267474 + L1MC1 LINE L1 5371 6333 0 2031 149 44 54 chr2 175989122 175989512 -77267071 - MLT1B LTR MaLR -2 388 3 951 243 99 48 chr2 175989557 175989990 -77266593 + LTR1B LTR ERV1 44 498 -328 583 290 53 42 chr2 175990210 175990567 -77266016 - L2 LINE L2 -245 3068 2710 2695 213 49 16 chr2 175991257 175991534 -77265049 + MER82 DNA MER2_type 1 267 -386 4252 116 52 51 chr2 175991534 175992260 -77264323 - LTR8A LTR ERV1 0 727 1 2695 213 49 16 chr2 175992260 175992534 -77264049 + MER82 DNA MER2_type 267 571 -82 268 196 0 0 chr2 175992534 175992567 -77264016 - MLT2D LTR ERVL 0 414 382 4244 140 33 10 chr2 175992567 175993262 -77263321 + MER50 LTR ERV1 1 711 -23 369 0 0 0 chr2 175993278 175993319 -77263264 + (TG)n Simple_repeat Simple_repeat 1 41 0 1865 177 58 94 chr2 175993348 175993829 -77262754 - MLT2B1 LTR ERVL -56 464 1 458 202 0 0 chr2 175993830 175993914 -77262669 + MER82 DNA MER2_type 564 647 -6 1323 153 112 84 chr2 175993933 175994080 -77262503 - MER63B DNA MER1_type -626 436 295 1932 142 3 27 chr2 175994080 175994376 -77262207 + AluJb SINE Alu 1 289 -23 1323 153 112 84 chr2 175994376 175994613 -77261970 - MER63B DNA MER1_type -767 295 37 195 42 0 0 chr2 175994613 175994637 -77261946 + (TTTA)n Simple_repeat Simple_repeat 4 27 0 1323 153 112 84 chr2 175994637 175994669 -77261914 - MER63B DNA MER1_type -1025 37 7 2314 100 0 13 chr2 175995899 175996200 -77260383 - AluSx SINE Alu -15 297 1 21 0 0 0 chr2 175996210 175996231 -77260352 + AT_rich Low_complexity Low_complexity 1 21 0 3764 159 5 23 chr2 175996327 175996973 -77259610 + MER50 LTR ERV1 12 645 -89 1375 98 0 35 chr2 175996973 175997176 -77259407 - AluSq SINE Alu -117 196 1 435 174 0 0 chr2 175997177 175997246 -77259337 + MER50 LTR ERV1 643 711 -23 478 303 73 84 chr2 175997382 175997821 -77258762 + L2 LINE L2 2835 3268 -4 261 311 56 0 chr2 175998000 175998090 -77258493 - MIR SINE MIR -122 140 46 182 333 39 20 chr2 175998113 175998215 -77258368 - L2 LINE L2 -1168 2146 2043 942 170 6 12 chr2 175998240 175998405 -77258178 + FRAM SINE Alu 1 163 -13 1851 214 82 34 chr2 175998803 175999032 -77257551 + L1MC4 LINE L1 6458 6675 -1367 446 33 17 0 chr2 175999032 175999092 -77257491 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 1851 214 82 34 chr2 175999092 175999389 -77257194 + L1MC4 LINE L1 6675 7009 -1033 2516 120 46 6 chr2 175999394 175999744 -77256839 - THE1B LTR MaLR 0 364 1 246 149 21 21 chr2 175999759 175999806 -77256777 - MLT1G LTR MaLR -474 116 70 2252 223 77 22 chr2 176000367 176001068 -77255515 + L1MC4 LINE L1 7004 7903 -139 7711 37 10 0 chr2 176001143 176002308 -77254275 - L1PA4 LINE L1 -3 6152 4977 1656 126 7 100 chr2 176002595 176002905 -77253678 - AluSq SINE Alu -10 303 23 226 366 49 14 chr2 176003035 176003177 -77253406 - MIR SINE MIR -111 151 5 265 327 161 31 chr2 176003222 176003445 -77253138 + L2 LINE L2 2443 2694 -620 1942 160 0 13 chr2 176003472 176003779 -77252804 + AluJb SINE Alu 1 303 -9 181 79 0 53 chr2 176004330 176004368 -77252215 + (TGAA)n Simple_repeat Simple_repeat 2 37 0 2436 77 0 0 chr2 176004501 176004798 -77251785 - AluY SINE Alu -14 297 1 733 164 18 0 chr2 176004929 176005039 -77251544 - FLAM_A SINE Alu -30 112 1 23 0 0 0 chr2 176006100 176006123 -77250460 + AT_rich Low_complexity Low_complexity 1 23 0 1920 161 0 37 chr2 176007220 176007544 -77249039 - AluJb SINE Alu 0 312 1 188 431 32 8 chr2 176007631 176007754 -77248829 - L2 LINE L2 -229 3043 2918 22 0 0 0 chr2 176007819 176007841 -77248742 + AT_rich Low_complexity Low_complexity 1 22 0 781 186 0 0 chr2 176007844 176007962 -77248621 + FLAM_C SINE Alu 2 119 -24 294 236 0 45 chr2 176007964 176008053 -77248530 + MIR SINE MIR 114 198 -64 1173 157 15 10 chr2 176008053 176008257 -77248326 + MER2 DNA MER2_type 2 206 -139 26 30 0 0 chr2 176008259 176008292 -77248291 + AT_rich Low_complexity Low_complexity 1 33 0 253 250 33 0 chr2 176008338 176008398 -77248185 + MIR SINE MIR 201 262 0 195 69 0 0 chr2 176008943 176008972 -77247611 + (CGAT)n Simple_repeat Simple_repeat 4 32 0 * 243 88 0 0 chr2 176008961 176008995 -77247588 + (CAGA)n Simple_repeat Simple_repeat 3 36 0 2565 155 16 20 chr2 176009005 176009444 -77247139 + LTR23 LTR ERV1 1 437 0 1090 262 116 28 chr2 176009988 176010481 -77246102 + MLT1H LTR MaLR 1 536 -13 801 152 0 0 chr2 176011075 176011187 -77245396 - FLAM_C SINE Alu -26 117 6 1011 170 58 67 chr2 176011446 176011670 -77244913 - AluJo SINE Alu -90 222 1 202 305 17 0 chr2 176012075 176012134 -77244449 + L2 LINE L2 443 502 -2812 1297 192 7 22 chr2 176012147 176012423 -77244160 - MER74B LTR ERVL -293 329 58 984 207 144 39 chr2 176014872 176015310 -77241273 + Charlie4a DNA MER1_type 22 507 -1 223 202 0 149 chr2 176016086 176016200 -77240383 + MIR3 SINE MIR 97 193 -15 196 178 44 22 chr2 176016314 176016359 -77240224 + L2 LINE L2 3216 3261 -11 214 263 288 0 chr2 176017172 176017252 -77239331 + MIR3 SINE MIR 54 156 -52 255 61 0 0 chr2 176017397 176017430 -77239153 + (CA)n Simple_repeat Simple_repeat 2 34 0 420 311 51 17 chr2 176018772 176019068 -77237515 + L1M4 LINE L1 4406 4711 -1435 571 244 42 47 chr2 176019202 176019395 -77237188 - MLT1J LTR MaLR 0 511 320 278 316 43 17 chr2 176019487 176019604 -77236979 - MLT1J LTR MaLR -323 188 69 313 152 30 45 chr2 176019699 176019765 -77236818 + MER103 DNA DNA 13 77 -89 83 0 0 0 chr2 176019855 176019938 -77236645 + AT_rich Low_complexity Low_complexity 1 83 0 554 282 139 20 chr2 176020032 176020326 -77236257 + MER102a DNA MER1_type 2 330 0 186 59 29 59 chr2 176020663 176020697 -77235886 + L2 LINE L2 3223 3255 -17 195 352 0 0 chr2 176022025 176022079 -77234504 + L2 LINE L2 3041 3094 -178 718 249 86 46 chr2 176022557 176022906 -77233677 - MER34B LTR ERV1 0 565 203 200 280 0 0 chr2 176024872 176024922 -77231661 + L2 LINE L2 3223 3272 0 788 155 9 0 chr2 176024932 176025048 -77231535 + FLAM_C SINE Alu 2 118 -25 434 300 68 23 chr2 176025803 176026023 -77230560 + L2 LINE L2 2160 2389 -925 439 342 58 32 chr2 176026214 176026404 -77230179 + MER91A DNA MER1_type 2 196 0 395 320 106 78 chr2 176026672 176027003 -77229580 + L2 LINE L2 2932 3271 -1 199 358 24 8 chr2 176027173 176027296 -77229287 - MIR SINE MIR -12 250 126 1388 205 13 23 chr2 176028296 176028603 -77227980 - AluJo SINE Alu -8 304 1 23 0 0 0 chr2 176028803 176028826 -77227757 + AT_rich Low_complexity Low_complexity 1 23 0 308 67 0 0 chr2 176028998 176029043 -77227540 - L1MA3 LINE L1 0 6305 6261 692 267 24 44 chr2 176030309 176030560 -77226023 + MIR SINE MIR 14 259 -3 845 260 178 27 chr2 176031585 176032028 -77224555 - L2 LINE L2 0 3313 2804 24 32 0 0 chr2 176032667 176032698 -77223885 + AT_rich Low_complexity Low_complexity 1 31 0 2372 94 0 0 chr2 176033156 176033463 -77223120 - AluY SINE Alu -4 307 1 2386 148 83 16 chr2 176033466 176033900 -77222683 - MLT1C LTR MaLR 0 467 5 2141 131 7 0 chr2 176033942 176034248 -77222335 + AluSq SINE Alu 1 308 -5 2235 115 0 0 chr2 176034451 176034746 -77221837 - AluSx SINE Alu -17 295 1 1487 150 87 19 chr2 176034901 176035205 -77221378 - AluJb SINE Alu 0 323 2 589 258 74 0 chr2 176035296 176035513 -77221070 - MIR SINE MIR -12 250 18 346 309 51 12 chr2 176035568 176035741 -77220842 + MIR SINE MIR 33 218 -44 622 308 128 0 chr2 176036109 176036336 -77220247 + MIR SINE MIR 2 257 -5 272 200 14 0 chr2 176036559 176036629 -77219954 + CT-rich Low_complexity Low_complexity 2 72 0 907 253 43 25 chr2 176036872 176037149 -77219434 - L1ME1 LINE L1 -5 6161 5880 1481 165 23 27 chr2 176037741 176038002 -77218581 - AluJo SINE Alu -32 280 21 33 25 0 0 chr2 176038758 176038798 -77217785 + AT_rich Low_complexity Low_complexity 1 40 0 856 256 127 16 chr2 176038799 176039178 -77217405 + L1ME4a LINE L1 5658 6078 -43 257 125 0 21 chr2 176039398 176039446 -77217137 + (TTCC)n Simple_repeat Simple_repeat 2 48 0 2086 127 6 16 chr2 176039452 176039768 -77216815 - AluSq SINE Alu 0 313 1 2242 154 20 6 chr2 176041206 176041562 -77215021 - MLT1A1 LTR MaLR 0 365 5 738 260 92 9 chr2 176041876 176042103 -77214480 - MIR SINE MIR -15 247 2 813 150 0 57 chr2 176042915 176043055 -77213528 - FLAM_C SINE Alu -11 132 1 23 54 0 0 chr2 176043210 176043247 -77213336 + AT_rich Low_complexity Low_complexity 1 37 0 407 68 17 0 chr2 176044634 176044693 -77211890 + (CA)n Simple_repeat Simple_repeat 1 60 0 753 187 0 30 chr2 176044701 176044835 -77211748 - FLAM_A SINE Alu -2 131 2 382 119 87 48 chr2 176044966 176045092 -77211491 - Charlie7 DNA MER1_type -65 2547 2417 * 1391 278 75 58 chr2 176045085 176045221 -77211362 - Charlie7 DNA MER1_type -1891 721 589 2004 137 0 13 chr2 176045221 176045521 -77211062 - AluSx SINE Alu -16 296 1 1391 278 75 58 chr2 176045521 176046089 -77210494 - Charlie7 DNA MER1_type -2023 589 5 771 190 0 0 chr2 176047187 176047303 -77209280 + FLAM_C SINE Alu 2 117 -26 1090 262 116 28 chr2 176047896 176048389 -77208194 - MLT1H LTR MaLR -13 536 1 2565 155 16 20 chr2 176048933 176049372 -77207211 - LTR23 LTR ERV1 0 437 1 263 150 17 0 chr2 176049376 176049436 -77207147 + (TCTA)n Simple_repeat Simple_repeat 3 63 0 253 250 33 0 chr2 176049983 176050043 -77206540 - MIR SINE MIR 0 262 201 1173 157 15 10 chr2 176050124 176050328 -77206255 - MER2 DNA MER2_type -139 206 2 303 236 0 45 chr2 176050328 176050417 -77206166 - MIR SINE MIR -64 198 114 781 186 0 0 chr2 176050419 176050537 -77206046 - FLAM_C SINE Alu -24 119 2 21 0 0 0 chr2 176050540 176050561 -77206022 + AT_rich Low_complexity Low_complexity 1 21 0 202 423 32 8 chr2 176050626 176050749 -77205834 + L2 LINE L2 2918 3043 -229 1920 161 0 37 chr2 176050836 176051160 -77205423 + AluJb SINE Alu 1 312 0 23 0 0 0 chr2 176052258 176052281 -77204302 + AT_rich Low_complexity Low_complexity 1 23 0 733 164 18 0 chr2 176053342 176053452 -77203131 + FLAM_A SINE Alu 1 112 -30 2426 81 0 0 chr2 176053583 176053880 -77202703 + AluY SINE Alu 1 297 -14 181 79 0 53 chr2 176054013 176054051 -77202532 + (TTCA)n Simple_repeat Simple_repeat 2 37 0 1942 160 0 13 chr2 176054602 176054909 -77201674 - AluJb SINE Alu -9 303 1 265 327 161 31 chr2 176054936 176055159 -77201424 - L2 LINE L2 -620 2694 2443 226 366 49 14 chr2 176055204 176055346 -77201237 + MIR SINE MIR 5 151 -111 1656 126 7 100 chr2 176055476 176055786 -77200797 + AluSq SINE Alu 23 303 -10 7711 37 12 0 chr2 176056073 176057238 -77199345 + L1PA4 LINE L1 4977 6152 -3 2263 226 71 20 chr2 176057332 176058014 -77198569 - L1MC4 LINE L1 -162 7880 7004 246 149 21 21 chr2 176058575 176058622 -77197961 + MLT1G LTR MaLR 70 116 -474 2501 118 49 6 chr2 176058637 176058986 -77197597 + THE1B LTR MaLR 1 364 0 1851 214 82 34 chr2 176058991 176059288 -77197295 - L1MC4 LINE L1 -1033 7009 6675 410 36 18 0 chr2 176059288 176059344 -77197239 + (TCTA)n Simple_repeat Simple_repeat 2 58 0 1851 214 82 34 chr2 176059344 176059573 -77197010 - L1MC4 LINE L1 -1367 6675 6458 958 170 6 12 chr2 176059971 176060136 -77196447 - FRAM SINE Alu -13 163 1 189 333 39 20 chr2 176060161 176060263 -77196320 + L2 LINE L2 2043 2146 -1168 263 311 56 0 chr2 176060286 176060376 -77196207 + MIR SINE MIR 46 140 -122 180 268 85 59 chr2 176060411 176060564 -77196019 + L2 LINE L2 2272 2428 -886 * 493 303 73 84 chr2 176060555 176060994 -77195589 - L2 LINE L2 -4 3268 2835 181 336 0 80 chr2 176061013 176061126 -77195457 + L2 LINE L2 2941 3044 -228 404 174 0 0 chr2 176061130 176061199 -77195384 - MER50 LTR ERV1 -23 711 643 1399 109 0 5 chr2 176061200 176061392 -77195191 + AluSq SINE Alu 1 191 -122 3521 158 6 23 chr2 176061395 176062048 -77194535 - MER50 LTR ERV1 -81 653 12 21 0 0 0 chr2 176062144 176062165 -77194418 + AT_rich Low_complexity Low_complexity 1 21 0 2225 114 0 37 chr2 176062175 176062499 -77194084 + AluSx SINE Alu 1 312 0 2127 158 22 2 chr2 176062867 176063271 -77193312 - L1MB3 LINE L1 -3 6180 5769 420 301 187 5 chr2 176064534 176064882 -77191701 - L1ME4a LINE L1 -91 6030 5600 940 177 36 10 chr2 176064882 176065074 -77191509 + MER105 DNA DNA 4 200 -4 420 301 187 5 chr2 176065074 176065121 -77191462 - L1ME4a LINE L1 -521 5600 5563 198 103 0 0 chr2 176066027 176066056 -77190527 + (A)n Simple_repeat Simple_repeat 1 29 0 2262 52 7 3 chr2 176066946 176067233 -77189350 - AluY SINE Alu -11 300 13 1194 107 0 0 chr2 176068546 176068723 -77187860 + (TA)n Simple_repeat Simple_repeat 2 178 0 309 51 0 0 chr2 176068722 176068761 -77187822 + (CA)n Simple_repeat Simple_repeat 2 40 0 * 804 151 0 0 chr2 176068767 176068886 -77187697 + AluJb SINE Alu 15 133 -179 311 169 0 26 chr2 176068905 176068982 -77187601 + (CATATA)n Simple_repeat Simple_repeat 2 76 0 2348 71 0 0 chr2 176069122 176069404 -77187179 - AluY SINE Alu -27 284 3 1584 198 7 0 chr2 176069405 176069683 -77186900 - AluJb SINE Alu -32 280 1 261 235 92 0 chr2 176069685 176069783 -77186800 - L1ME3A LINE L1 -220 5950 5844 2343 109 0 3 chr2 176070228 176070540 -77186043 - AluSx SINE Alu -1 311 1 919 339 111 41 chr2 176070916 176071585 -77184998 + L2 LINE L2 1783 2404 -910 1819 126 0 0 chr2 176071585 176071831 -77184752 - AluSx SINE Alu -66 246 1 919 339 111 41 chr2 176071831 176072081 -77184502 + L2 LINE L2 2404 2778 -536 2196 105 14 3 chr2 176072081 176072377 -77184206 - AluSq SINE Alu -14 299 1 919 339 111 41 chr2 176072377 176072442 -77184141 + L2 LINE L2 2778 2837 -477 25623 28 9 0 chr2 176072550 176076557 -77180026 + L1PA4 LINE L1 2111 6153 -2 1825 156 31 3 chr2 176077169 176077457 -77179126 - AluSx SINE Alu -16 296 1 2730 165 51 4 chr2 176079037 176079744 -77176839 + L1MB4 LINE L1 5096 5828 -352 782 166 25 45 chr2 176079764 176079921 -77176662 - MER68 LTR ERV1 -36 526 373 * 1507 177 40 4 chr2 176079913 176080190 -77176393 + MER68 LTR ERV1 276 562 0 418 176 11 44 chr2 176080342 176080432 -77176151 - MER44D DNA MER2_type 0 605 519 452 195 0 0 chr2 176080432 176080519 -77176064 - Tigger5 DNA MER2_type 0 2323 2237 317 176 0 0 chr2 176080531 176080582 -77176001 - Tigger5 DNA MER2_type -2270 53 3 1252 114 13 42 chr2 176080583 176080819 -77175764 - MER44D DNA MER2_type -84 525 27 280 302 22 7 chr2 176080870 176081009 -77175574 + L1ME LINE L1 5731 5871 -250 229 250 36 0 chr2 176082056 176082112 -77174471 + L2 LINE L2 3251 3308 -5 1421 170 137 7 chr2 176082918 176083189 -77173394 - AluJo SINE Alu -6 306 1 307 306 250 21 chr2 176083391 176083859 -77172724 + L1ME LINE L1 3697 4271 -1875 13980 115 56 5 chr2 176084029 176086323 -77170260 - Tigger1 DNA MER2_type -2 2416 6 218 265 46 133 chr2 176087436 176087515 -77169068 - MIR SINE MIR -122 140 77 1994 112 11 0 chr2 176087515 176087820 -77168763 + AluSc SINE Alu 1 308 0 218 265 46 133 chr2 176087820 176087890 -77168693 - MIR SINE MIR -185 77 3 255 275 99 7 chr2 176087933 176088075 -77168508 + L1ME LINE L1 5298 5452 -669 484 275 69 16 chr2 176088117 176088364 -77168219 + L1ME LINE L1 5541 5800 -321 244 248 109 30 chr2 176088765 176088866 -77167717 + MIR SINE MIR 124 232 -30 2335 106 0 0 chr2 176088961 176089263 -77167320 - AluSc SINE Alu -7 302 1 453 213 221 0 chr2 176089385 176089507 -77167076 + MIR SINE MIR 2 150 -112 378 232 125 18 chr2 176089604 176089716 -77166867 + L2 LINE L2 3190 3313 0 467 266 51 62 chr2 176089965 176090142 -77166441 + MIR SINE MIR 86 260 -2 472 297 153 66 chr2 176090177 176090885 -77165698 + L2 LINE L2 2199 2967 -347 793 208 98 11 chr2 176090951 176091134 -77165449 + MIR SINE MIR 37 235 -27 2086 124 0 16 chr2 176091248 176091554 -77165029 - AluJb SINE Alu -9 303 3 957 324 111 27 chr2 176091691 176091963 -77164620 - HAL1 LINE L1 -1542 965 717 2435 47 37 3 chr2 176091963 176092261 -77164322 - AluY SINE Alu -3 308 1 957 324 111 27 chr2 176092261 176092869 -77163714 - HAL1 LINE L1 -1790 717 11 194 368 105 0 chr2 176093286 176093381 -77163202 - L2 LINE L2 -10 3303 3199 352 313 132 25 chr2 176095326 176095554 -77161029 + MIR SINE MIR 12 262 0 * 401 311 123 48 chr2 176095543 176095771 -77160812 - MIR SINE MIR -5 257 13 226 221 15 59 chr2 176095944 176096012 -77160571 + L2 LINE L2 3208 3272 0 435 282 70 14 chr2 176096520 176096662 -77159921 - MIR SINE MIR -110 152 3 2215 142 23 0 chr2 176096846 176097199 -77159384 - MER46B DNA MER2_type 0 236 1 228 286 95 56 chr2 176097967 176098093 -77158490 - L2 LINE L2 0 3272 3142 230 267 51 111 chr2 176098326 176098543 -77158040 + L2 LINE L2 3103 3306 -7 394 241 139 11 chr2 176099226 176099413 -77157170 + HAL1 LINE L1 1601 1811 -696 400 263 119 51 chr2 176099898 176100210 -77156373 + HAL1 LINE L1 2175 2507 0 2778 50 3 14 chr2 176102120 176102481 -77154102 - L1PA7 LINE L1 -3 6151 5795 259 326 0 22 chr2 176102699 176102788 -77153795 + MIR SINE MIR 31 117 -91 2610 55 0 0 chr2 176102940 176103247 -77153336 + AluY SINE Alu 1 307 -4 202 156 22 22 chr2 176103508 176103553 -77153030 + (TGAA)n Simple_repeat Simple_repeat 3 47 0 2013 112 11 28 chr2 176103862 176104168 -77152415 - AluSx SINE Alu 0 301 1 29 94 0 0 chr2 176104195 176104280 -77152303 + AT_rich Low_complexity Low_complexity 1 85 0 475 268 33 26 chr2 176104798 176104951 -77151632 + MLT1H LTR MaLR 1 154 -395 351 199 176 29 chr2 176105103 176105239 -77151344 + MLT1H LTR MaLR 390 545 -4 3005 135 29 35 chr2 176106641 176106995 -77149588 - L1MB4 LINE L1 -7 6173 5822 1885 184 7 0 chr2 176106995 176107305 -77149278 - AluJb SINE Alu 0 312 1 3005 135 29 35 chr2 176107305 176107528 -77149055 - L1MB4 LINE L1 -358 5822 5599 2383 173 48 8 chr2 176108349 176108824 -77147759 + L1MB3 LINE L1 5683 6176 -7 372 238 49 80 chr2 176109011 176109289 -77147294 - L1MC4a LINE L1 -352 5810 5686 21 0 0 0 chr2 176109619 176109640 -77146943 + AT_rich Low_complexity Low_complexity 1 21 0 11569 125 88 50 chr2 176109856 176112151 -77144432 + Tigger1 DNA MER2_type 38 2418 0 433 319 50 65 chr2 176112491 176112640 -77143943 + L1M4 LINE L1 4615 4765 -1381 1613 95 19 19 chr2 176112640 176112904 -77143679 + L1MA1 LINE L1 6039 6302 0 433 319 50 65 chr2 176112904 176113212 -77143371 + L1M4 LINE L1 4765 5065 -1081 409 117 39 0 chr2 176113930 176114007 -77142576 + (CATATA)n Simple_repeat Simple_repeat 1 80 0 185 57 171 0 chr2 176114908 176114943 -77141640 + MIR SINE MIR 106 146 -62 233 277 0 31 chr2 176116982 176117047 -77139536 - L2 LINE L2 -1 3312 3250 22 0 0 0 chr2 176117703 176117725 -77138858 + AT_rich Low_complexity Low_complexity 1 22 0 1767 160 29 14 chr2 176117744 176118094 -77138489 - MSTA LTR MaLR 0 428 74 262 284 15 3 chr2 176118135 176118275 -77138308 + L1M4b LINE L1 31 474 -6381 * 866 278 49 7 chr2 176118270 176118576 -77138007 + L1MB7 LINE L1 5857 6175 -9 1161 176 55 0 chr2 176118682 176118920 -77137663 - L1MB3 LINE L1 -3 6180 5930 309 347 20 80 chr2 176119038 176119289 -77137294 + L2 LINE L2 2958 3193 -79 689 226 50 22 chr2 176119321 176119502 -77137081 + MER5A DNA MER1_type 4 189 0 241 296 15 34 chr2 176120951 176121073 -77135510 + GA-rich Low_complexity Low_complexity 4 199 0 373 327 130 0 chr2 176121456 176121618 -77134965 - MER5A DNA MER1_type 0 189 7 268 244 55 24 chr2 176122078 176122205 -77134378 - L1MC4a LINE L1 -1630 6178 6048 52 17 0 0 chr2 176122213 176122272 -77134311 + AT_rich Low_complexity Low_complexity 1 59 0 350 150 60 0 chr2 176122272 176122439 -77134144 + (TA)n Simple_repeat Simple_repeat 1 177 0 45 91 0 7 chr2 176122439 176122576 -77134007 + AT_rich Low_complexity Low_complexity 1 138 -15 625 214 8 0 chr2 176122576 176122693 -77133890 - FLAM_C SINE Alu -15 118 1 45 91 0 7 chr2 176122693 176122709 -77133874 + AT_rich Low_complexity Low_complexity 138 153 0 418 266 11 0 chr2 176122758 176122935 -77133648 + (TA)n Simple_repeat Simple_repeat 2 180 0 248 304 0 14 chr2 176123116 176123185 -77133398 - L2 LINE L2 0 3272 3205 2215 81 7 20 chr2 176123311 176123607 -77132976 - AluSx SINE Alu -20 292 1 180 313 188 0 chr2 176123672 176123768 -77132815 - L2 LINE L2 -30 3242 3129 21 0 0 0 chr2 176123783 176123804 -77132779 + AT_rich Low_complexity Low_complexity 1 21 0 2060 142 66 3 chr2 176123818 176124184 -77132399 + MLT1B LTR MaLR 2 390 0 406 329 44 13 chr2 176124754 176124912 -77131671 - MER5B DNA MER1_type 0 178 16 2380 99 3 0 chr2 176126636 176126940 -77129643 - AluSp SINE Alu -8 305 1 24 32 0 0 chr2 176128096 176128127 -77128456 + AT_rich Low_complexity Low_complexity 1 31 0 251 184 126 78 chr2 176128539 176128642 -77127941 - MER103 DNA DNA -24 142 35 647 50 0 0 chr2 176128983 176129063 -77127520 + MADE1 DNA Mariner 1 80 0 227 119 0 51 chr2 176130980 176131039 -77125544 + (A)n Simple_repeat Simple_repeat 1 56 0 191 179 13 128 chr2 176131438 176131516 -77125067 - MIR3 SINE MIR -2 206 138 614 274 58 23 chr2 176133083 176133342 -77123241 + Charlie8 DNA MER1_type 7 274 -2143 364 273 132 0 chr2 176133422 176133543 -77123040 - MIR3 SINE MIR -33 175 39 1451 166 10 52 chr2 176133591 176133899 -77122684 - AluJo SINE Alu -5 307 13 920 169 28 52 chr2 176136194 176136321 -77120262 + MER3 DNA MER1_type 1 123 -86 2386 64 3 3 chr2 176136321 176136616 -77119967 - AluY SINE Alu -16 295 1 920 169 28 52 chr2 176136616 176136701 -77119882 + MER3 DNA MER1_type 123 208 -1 509 223 121 0 chr2 176136835 176137001 -77119582 - L1MEc LINE L1 -5982 414 229 207 0 0 0 chr2 176138252 176138275 -77118308 + (CCCCG)n Simple_repeat Simple_repeat 2 24 0 312 27 0 0 chr2 176138452 176138489 -77118094 + (TG)n Simple_repeat Simple_repeat 2 38 0 255 359 42 12 chr2 176138668 176138835 -77117748 + MIR3 SINE MIR 30 201 -7 186 43 0 0 chr2 176140366 176140389 -77116194 + (CAA)n Simple_repeat Simple_repeat 2 24 0 471 241 128 61 chr2 176140412 176140740 -77115843 - MLT1J LTR MaLR -51 460 111 1080 162 89 60 chr2 176142711 176143026 -77113557 + MER33 DNA MER1_type 1 324 0 266 287 61 52 chr2 176143119 176143234 -77113349 - L2 LINE L2 -8 3305 3190 1837 277 59 60 chr2 176143865 176144763 -77111820 - HAL1 LINE L1 -131 2376 1479 1719 157 43 20 chr2 176144763 176145068 -77111515 - AluJb SINE Alu 0 312 1 1837 277 59 60 chr2 176145068 176145475 -77111108 - HAL1 LINE L1 -1028 1479 1073 624 283 38 40 chr2 176146352 176146723 -77109860 - HAL1 LINE L1 -1418 1089 720 1959 86 32 45 chr2 176146747 176147061 -77109522 - AluY SINE Alu -1 310 1 2210 87 3 23 chr2 176147070 176147369 -77109214 - AluSg SINE Alu -17 293 1 227 303 42 34 chr2 176147992 176148111 -77108472 - MIR3 SINE MIR -31 177 58 9093 26 2 5 chr2 176148271 176149413 -77107170 + L1P LINE L1 4005 5142 -1004 336 328 169 16 chr2 176149625 176149814 -77106769 + L2 LINE L2 3055 3272 0 1894 86 112 4 chr2 176149926 176150195 -77106388 + AluSx SINE Alu 1 298 -14 198 0 0 0 chr2 176150195 176150217 -77106366 + (TA)n Simple_repeat Simple_repeat 2 23 0 2630 51 0 0 chr2 176150543 176150854 -77105729 + AluY SINE Alu 1 311 0 374 389 0 16 chr2 176151080 176151265 -77105318 + MER5A DNA MER1_type 4 185 -4 1567 167 88 27 chr2 176151265 176151559 -77105024 + AluJb SINE Alu 1 312 0 499 255 113 49 chr2 176151917 176151973 -77104610 - MIR SINE MIR -18 244 193 4143 115 11 9 chr2 176151973 176152623 -77103960 - MER39B LTR ERV1 0 653 3 499 255 113 49 chr2 176152623 176152770 -77103813 - MIR SINE MIR -69 193 28 326 336 9 9 chr2 176153006 176153113 -77103470 + MIR3 SINE MIR 82 188 -20 206 374 24 8 chr2 176153457 176153580 -77103003 + MIR3 SINE MIR 9 133 -75 266 286 42 59 chr2 176153761 176153880 -77102703 - L2 LINE L2 -25 3288 3172 238 280 21 0 chr2 176153888 176153981 -77102602 + L1ME3A LINE L1 5301 5395 -769 426 292 117 51 chr2 176153988 176154380 -77102203 + L1ME3A LINE L1 5461 5884 -286 2333 53 0 0 chr2 176154901 176155185 -77101398 + AluY SINE Alu 18 301 -10 213 121 0 0 chr2 176156076 176156109 -77100474 + (T)n Simple_repeat Simple_repeat 1 33 0 426 301 187 5 chr2 176157015 176157062 -77099521 + L1ME4a LINE L1 5563 5600 -521 940 177 36 10 chr2 176157062 176157254 -77099329 - MER105 DNA DNA -4 200 4 426 301 187 5 chr2 176157254 176157602 -77098981 + L1ME4a LINE L1 5600 6030 -91 2103 161 22 2 chr2 176158864 176159268 -77097315 + L1MB3 LINE L1 5769 6180 -3 2169 135 3 0 chr2 176159644 176159956 -77096627 - AluSq SINE Alu 0 313 1 180 0 0 0 chr2 176159971 176159991 -77096592 + (A)n Simple_repeat Simple_repeat 1 20 0 2161 128 16 0 chr2 176160212 176160518 -77096065 - AluSq SINE Alu -2 311 1 21 0 0 0 chr2 176160900 176160921 -77095662 + AT_rich Low_complexity Low_complexity 1 21 0 935 121 0 0 chr2 176160936 176161060 -77095523 + AluSq/x SINE Alu 1 124 -189 1289 209 133 58 chr2 176162044 176162539 -77094044 - MLT1F1 LTR MaLR -14 553 32 2220 102 0 3 chr2 176164180 176164474 -77092109 - AluSx SINE Alu -19 293 1 187 352 35 35 chr2 176164872 176165017 -77091566 + L2 LINE L2 2831 2975 -338 24 53 0 0 chr2 176165533 176165571 -77091012 + AT_rich Low_complexity Low_complexity 1 38 0 267 175 0 0 chr2 176165910 176165967 -77090616 + A-rich Low_complexity Low_complexity 1 57 0 2194 127 0 0 chr2 176166601 176166893 -77089690 + AluSg SINE Alu 1 292 -18 372 297 193 5 chr2 176167394 176167596 -77088987 + MIR SINE MIR 23 262 0 245 333 149 61 chr2 176168795 176169170 -77087413 + L3 LINE CR1 1165 1572 -5 2293 110 0 0 chr2 176170698 176171008 -77085575 + AluSx SINE Alu 3 312 0 582 288 146 0 chr2 176172519 176172745 -77083838 - MIR SINE MIR -1 261 3 332 237 135 45 chr2 176172749 176172905 -77083678 - MIR3 SINE MIR -14 194 25 921 133 0 0 chr2 176174218 176174346 -77082237 - AluSg/x SINE Alu -11 301 174 1636 113 0 38 chr2 176174346 176174585 -77081998 - AluSx SINE Alu -82 230 1 2215 91 3 20 chr2 176174594 176174891 -77081692 - AluSg SINE Alu -18 292 1 227 303 42 34 chr2 176175514 176175633 -77080950 - MIR3 SINE MIR -31 177 58 11034 25 1 4 chr2 176175793 176177579 -77079004 + L1P2 LINE L1 4005 5785 -370 26229 30 8 2 chr2 176177579 176181689 -77074894 + L1PA4 LINE L1 2021 6155 0 408 158 0 0 chr2 176181917 176181993 -77074590 + AluS SINE Alu 229 304 -5 184 206 0 0 chr2 176184340 176184374 -77072209 + MER5A DNA MER1_type 1 34 -155 2010 142 3 0 chr2 176184399 176184694 -77071889 + AluSx SINE Alu 1 296 -16 405 282 120 37 chr2 176185229 176185483 -77071100 + L1M4 LINE L1 2874 3105 -3041 2247 95 20 0 chr2 176185483 176185787 -77070796 + AluSg SINE Alu 1 310 0 405 282 120 37 chr2 176185787 176185924 -77070659 + L1M4 LINE L1 3105 3229 -2917 935 128 0 0 chr2 176185924 176186057 -77070526 + FLAM_C SINE Alu 1 133 0 405 282 120 37 chr2 176186057 176186345 -77070238 + L1M4 LINE L1 3229 3611 -2535 590 246 83 38 chr2 176186355 176186643 -77069940 + L1M4 LINE L1 3691 3991 -2155 294 300 50 20 chr2 176186684 176186784 -77069799 - MIR SINE MIR -72 136 34 316 127 2 8 chr2 176187246 176187471 -77069112 + AluJb SINE Alu 3 288 -14 249 176 59 0 chr2 176187610 176187661 -77068922 - L2 LINE L2 -7 3306 3253 1077 188 195 16 chr2 176188234 176188490 -77068093 - AluJo SINE Alu 0 302 1 781 259 40 18 chr2 176188902 176189130 -77067453 + MIR SINE MIR 16 248 -14 2205 104 0 0 chr2 176189329 176189618 -77066965 - AluSg SINE Alu -21 289 1 2036 142 106 61 chr2 176190686 176191287 -77065296 + MER39 LTR ERV1 1 706 -1 1653 162 42 27 chr2 176192087 176192421 -77064162 - MER44D DNA MER2_type 0 609 1 34373 42 1 1 chr2 176192513 176196910 -77059673 + L1P LINE L1 4 4401 -1745 308 308 30 23 chr2 176197153 176197286 -77059297 + L1ME4a LINE L1 5793 5926 -195 29 60 0 0 chr2 176197545 176197595 -77058988 + AT_rich Low_complexity Low_complexity 1 50 0 1687 110 20 0 chr2 176198723 176198978 -77057605 + L1MC1 LINE L1 6072 6331 -2 573 169 7 27 chr2 176199210 176199358 -77057225 + GA-rich Low_complexity Low_complexity 2 146 0 26 50 0 0 chr2 176200241 176200281 -77056302 + AT_rich Low_complexity Low_complexity 1 40 0 374 278 80 59 chr2 176200796 176201035 -77055548 - MIR SINE MIR -6 256 19 393 288 44 50 chr2 176201642 176201802 -77054781 - MIR3 SINE MIR -11 197 39 303 288 39 102 chr2 176201970 176202175 -77054408 + L2 LINE L2 3081 3272 0 262 321 109 15 chr2 176202178 176202315 -77054268 + L2 LINE L2 3163 3312 -1 199 319 0 0 chr2 176202715 176202762 -77053821 + MIR SINE MIR 28 74 -134 3007 137 43 0 chr2 176202900 176203390 -77053193 - L1PB4 LINE L1 -7 7211 6701 2504 101 50 24 chr2 176203390 176203802 -77052781 + MLT2A1 LTR ERVL 1 481 -34 207 0 0 0 chr2 176203822 176203845 -77052738 + (CA)n Simple_repeat Simple_repeat 2 24 0 201 147 0 0 chr2 176203877 176203911 -77052672 + (TATATG)n Simple_repeat Simple_repeat 2 35 0 330 105 0 35 chr2 176203914 176203971 -77052612 + MLT2A2 LTR ERVL 399 453 0 13633 190 38 6 chr2 176203972 176207363 -77049220 - L1PB4 LINE L1 -514 6704 3211 554 128 53 11 chr2 176207363 176207457 -77049126 + MER4A LTR ERV1 1 98 -566 1885 148 3 22 chr2 176207457 176207809 -77048774 + MER4A LTR ERV1 261 664 0 4233 209 20 32 chr2 176207809 176208947 -77047636 - L1PB4 LINE L1 -3995 3214 2090 1630 171 204 11 chr2 176208948 176209305 -77047278 - MSTA LTR MaLR -2 426 1 2416 107 5 19 chr2 176209305 176209678 -77046905 - MSTA-int LTR MaLR 0 1580 1213 1610 150 48 48 chr2 176209678 176210011 -77046572 - THE1C LTR MaLR -38 337 5 805 149 75 0 chr2 176210016 176210218 -77046365 - L1PB4 LINE L1 -5120 2089 1845 1302 333 23 5 chr2 176210366 176210796 -77045787 - L1PB4 LINE L1 -6399 810 373 707 273 128 0 chr2 176210855 176211042 -77045541 + MIR SINE MIR 21 231 -31 297 261 15 0 chr2 176213142 176213207 -77043376 + MIR3 SINE MIR 98 163 -45 725 253 37 0 chr2 176213211 176213373 -77043210 + LTR40a LTR ERVL 5 172 -347 8968 131 25 1 chr2 176213491 176214831 -77041752 - L1M1 LINE L1 -5376 2189 819 488 61 0 0 chr2 176214828 176214894 -77041689 - L1M1 LINE L1 -6963 602 537 * 258 324 83 0 chr2 176215295 176215403 -77041180 + MIR SINE MIR 17 133 -75 23 33 0 0 chr2 176215499 176215529 -77041054 + AT_rich Low_complexity Low_complexity 1 30 0 889 219 109 13 chr2 176215601 176215839 -77040744 - MIR SINE MIR 0 262 2 235 247 134 74 chr2 176216251 176216375 -77040208 - MIR SINE MIR -75 133 4 1087 284 74 43 chr2 176216440 176216926 -77039657 + MLT1L LTR MaLR 42 542 -73 201 210 0 65 chr2 176217099 176217161 -77039422 + A-rich Low_complexity Low_complexity 4 61 0 1428 136 0 8 chr2 176217529 176217771 -77038812 - L1PA13 LINE L1 0 6163 5924 216 0 0 0 chr2 176218331 176218355 -77038228 + (T)n Simple_repeat Simple_repeat 1 24 0 233 330 72 10 chr2 176218548 176218645 -77037938 - MIR SINE MIR -62 146 44 257 333 62 4 chr2 176219140 176219416 -77037167 + L1P LINE L1 3488 3779 -2367 237 192 96 0 chr2 176219538 176219611 -77036972 + L1MC5 LINE L1 7149 7228 -733 409 280 31 17 chr2 176219627 176219827 -77036756 + L1MC4a LINE L1 5463 5665 -505 728 299 15 0 chr2 176219827 176220031 -77036552 - MIR SINE MIR -4 258 52 323 293 84 19 chr2 176220031 176220273 -77036310 + L1MC4a LINE L1 5663 5824 -297 1406 86 30 5 chr2 176220588 176220806 -77035777 + L1PA10 LINE L1 5945 6167 0 1303 164 91 36 chr2 176221002 176221332 -77035251 - L1MDa LINE L1 -4276 2264 1917 1687 247 47 28 chr2 176221357 176221851 -77034732 - L1MDa LINE L1 -5864 676 94 1166 193 30 10 chr2 176221847 176222142 -77034441 + L1M4 LINE L1 2155 2455 -3691 * 230 302 78 47 chr2 176222339 176222468 -77034115 - L2 LINE L2 0 3313 3181 451 323 37 43 chr2 176222775 176223075 -77033508 + MLT1K LTR MaLR 271 568 -20 4673 149 14 11 chr2 176224708 176225514 -77031069 + L1 LINE L1 3302 4109 -2037 2797 142 6 56 chr2 176225518 176226039 -77030544 + L1 LINE L1 4657 5151 -995 532 317 24 6 chr2 176228542 176228709 -77027874 - MLT1F LTR MaLR -371 171 2 763 144 0 8 chr2 176228875 176229007 -77027576 - L1MB8 LINE L1 0 6178 6048 4540 32 4 2 chr2 176229017 176229555 -77027028 - L1PA4 LINE L1 -2 6153 5615 1657 291 104 39 chr2 176229655 176230552 -77026031 - L1M4 LINE L1 -5587 955 1 589 334 65 39 chr2 176230748 176231086 -77025497 + L2 LINE L2 2012 2358 -956 513 285 125 15 chr2 176231187 176231387 -77025196 - MIR SINE MIR -40 222 1 441 320 69 11 chr2 176231915 176232090 -77024493 + MIR SINE MIR 60 244 -18 1113 173 0 69 chr2 176232583 176232814 -77023769 + AluJo SINE Alu 85 299 -13 22 0 0 0 chr2 176233012 176233034 -77023549 + AT_rich Low_complexity Low_complexity 1 22 0 189 107 0 0 chr2 176234187 176234215 -77022368 + (T)n Simple_repeat Simple_repeat 1 28 0 2847 13 3 0 chr2 176234652 176234967 -77021616 - AluYb8 SINE Alu -2 316 1 1025 121 36 0 chr2 176235666 176235832 -77020751 - L1MB8 LINE L1 -187 5991 5820 226 204 0 0 chr2 176236083 176236132 -77020451 - MER116 DNA Mariner -28 52 4 29 60 0 0 chr2 176236136 176236186 -77020397 + AT_rich Low_complexity Low_complexity 1 50 0 424 283 115 56 chr2 176236383 176236705 -77019878 - HAL1 LINE L1 -754 1753 1413 1142 207 4 65 chr2 176236713 176236959 -77019624 - MER8 DNA MER2_type -3 236 6 231 243 40 27 chr2 176237006 176237080 -77019503 - L1MEd LINE L1 -4875 1244 1170 1011 326 34 36 chr2 176237499 176238060 -77018523 - L2 LINE L2 0 3313 2750 280 338 118 23 chr2 176238099 176238531 -77018052 - L2 LINE L2 -2106 1208 736 3994 121 43 65 chr2 176238775 176239570 -77017013 + L1MA8 LINE L1 5272 6048 -243 1198 111 43 34 chr2 176239683 176239918 -77016665 + L1MA8 LINE L1 6051 6287 -4 1902 167 0 7 chr2 176240057 176240351 -77016232 + AluJo SINE Alu 1 292 -20 192 269 0 0 chr2 176240456 176240508 -77016075 - L2 LINE L2 0 3313 3262 6685 93 6 10 chr2 176240659 176241571 -77015012 - THE1A-int LTR MaLR -672 908 1 2696 91 6 0 chr2 176241571 176241924 -77014659 - THE1A LTR MaLR 0 355 1 1132 232 135 3 chr2 176241926 176242223 -77014360 - L1M4 LINE L1 -2291 4091 3756 1219 217 9 57 chr2 176242227 176242577 -77014006 - L1M4 LINE L1 -4662 1722 1390 2036 110 24 0 chr2 176242970 176243261 -77013322 + AluSq SINE Alu 16 313 0 1899 118 34 12 chr2 176247978 176248300 -77008283 + L1MA6 LINE L1 5966 6294 -6 229 218 26 77 chr2 176248940 176249018 -77007565 + T-rich Low_complexity Low_complexity 5 78 0 3057 184 43 21 chr2 176249068 176249722 -77006861 - L1MD1 LINE L1 -107 6135 5468 1159 254 80 4 chr2 176250966 176251411 -77005172 + MER90 LTR ERV1 35 614 0 24 32 0 0 chr2 176252042 176252073 -77004510 + AT_rich Low_complexity Low_complexity 1 31 0 1742 122 10 112 chr2 176252344 176252747 -77003836 + L1MC3 LINE L1 7401 7762 -23 5721 116 26 45 chr2 176254041 176255177 -77001406 - L1PB1 LINE L1 0 6151 5027 471 254 34 115 chr2 176255549 176255758 -77000825 - L2 LINE L2 -2 3311 3120 195 326 169 11 chr2 176255903 176256081 -77000502 + L2 LINE L2 3014 3219 -94 229 188 21 0 chr2 176256990 176257038 -76999545 - L2 LINE L2 0 3313 3265 308 43 22 0 chr2 176257181 176257227 -76999356 + (TC)n Simple_repeat Simple_repeat 1 47 0 1139 202 23 5 chr2 176258062 176258280 -76998303 + MER58A DNA MER1_type 1 222 -2 283 273 10 50 chr2 176258719 176258818 -76997765 - MIR3 SINE MIR -5 203 109 625 195 106 155 chr2 176259027 176259550 -76997033 - L2 LINE L2 -36 3277 2782 567 219 62 23 chr2 176259550 176259678 -76996905 + MER5A DNA MER1_type 1 133 -56 305 297 20 20 chr2 176260628 176260729 -76995854 + MIR SINE MIR 2 102 -160 1363 244 47 39 chr2 176260743 176261104 -76995479 - MLT1J1 LTR MaLR -75 371 8 519 196 0 0 chr2 176261139 176261231 -76995352 + MIR SINE MIR 71 162 -100 331 260 67 47 chr2 176261363 176261513 -76995070 + L1ME4a LINE L1 5953 6105 -16 226 217 17 0 chr2 176262468 176262588 -76993995 + (TA)n Simple_repeat Simple_repeat 1 122 0 247 130 22 0 chr2 176262823 176262869 -76993714 + MADE1 DNA Mariner 7 53 -27 261 303 101 17 chr2 176262897 176263016 -76993567 - L2 LINE L2 0 3272 3144 420 250 0 0 chr2 176264096 176264176 -76992407 + Tigger3(Golem) DNA MER2_type 1 80 -2949 636 159 28 0 chr2 176264280 176264387 -76992196 + Tigger3(Golem) DNA MER2_type 2929 3038 0 579 294 131 5 chr2 176264561 176264775 -76991808 - MIR SINE MIR -2 260 20 627 253 26 26 chr2 176265999 176266189 -76990394 + LTR40b LTR ERVL 186 375 -87 225 0 0 0 chr2 176266211 176266236 -76990347 + (A)n Simple_repeat Simple_repeat 1 25 0 395 191 38 19 chr2 176266250 176266355 -76990228 + LTR40b LTR ERVL 354 460 -2 241 327 96 26 chr2 176266362 176266518 -76990065 - MER5B DNA MER1_type -3 175 9 233 312 104 0 chr2 176267311 176267388 -76989195 + L2 LINE L2 3188 3272 0 280 282 20 19 chr2 176267953 176268058 -76988525 + MIR SINE MIR 11 117 -91 4835 123 32 8 chr2 176270160 176271458 -76985125 - L1PBa LINE L1 -4756 2107 634 1022 106 6 0 chr2 176271496 176271656 -76984927 + L1MA8 LINE L1 6128 6288 -3 5514 223 70 5 chr2 176271663 176272358 -76984225 + L1M4 LINE L1 3439 4087 -2059 312 27 0 0 chr2 176272358 176272395 -76984188 + (TAAAA)n Simple_repeat Simple_repeat 4 40 0 5514 223 70 5 chr2 176272395 176273172 -76983411 + L1M4 LINE L1 4087 5007 -1139 1261 162 32 5 chr2 176273182 176273398 -76983185 - MSTA LTR MaLR 0 428 207 483 218 73 0 chr2 176273401 176273525 -76983058 + L1M4 LINE L1 5059 5191 -955 * 1185 195 16 65 chr2 176273514 176273954 -76982629 + L1M4 LINE L1 5059 5471 -707 477 228 191 0 chr2 176273954 176274090 -76982493 - MLT1D LTR MaLR 0 505 344 585 259 154 0 chr2 176374103 176374304 -76882279 + LTR16A LTR ERVL 214 445 -5 1667 272 103 8 chr2 176374313 176374810 -76881773 - L2 LINE L2 -560 2754 2211 2132 107 34 3 chr2 176374849 176375147 -76881436 + AluSx SINE Alu 1 307 -5 487 277 204 8 chr2 176375356 176375591 -76880992 - L2 LINE L2 -1110 2204 1924 1370 156 4 4 chr2 176375691 176375916 -76880667 + AluSg/x SINE Alu 86 310 -2 218 31 0 31 chr2 176376291 176376323 -76880260 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 1185 193 19 5 chr2 176376584 176376791 -76879792 + MER63A DNA MER1_type 1 210 0 204 125 0 0 chr2 176376932 176376964 -76879619 + (A)n Simple_repeat Simple_repeat 1 32 0 378 301 154 32 chr2 176376983 176377262 -76879321 - L2 LINE L2 -5 3308 2996 837 110 0 31 chr2 176377556 176377712 -76878871 + AluSg/x SINE Alu 168 310 0 213 378 13 74 chr2 176378537 176378767 -76877816 + L2 LINE L2 3057 3272 0 251 259 43 69 chr2 176379294 176379410 -76877173 - MIR SINE MIR -66 142 30 5403 47 36 0 chr2 176379578 176380214 -76876369 - L1PA8 LINE L1 0 6172 5514 2044 144 0 10 chr2 176380355 176380660 -76875923 - AluJb SINE Alu -10 302 1 2168 116 10 3 chr2 176380692 176380986 -76875597 - AluSx SINE Alu -16 296 1 417 315 46 20 chr2 176382145 176382342 -76874241 + MIR SINE MIR 18 219 -43 214 281 56 34 chr2 176383680 176383769 -76872814 + MIR3 SINE MIR 95 185 -23 395 64 3 3 chr2 176383795 176383853 -76872730 - L1PA8 LINE L1 -373 5781 5734 3162 56 0 51 chr2 176383853 176384265 -76872318 + L1PA8 LINE L1 5777 6168 -4 182 259 19 19 chr2 176384328 176384382 -76872201 + MER5B DNA MER1_type 119 172 -6 441 310 70 22 chr2 176384529 176384758 -76871825 + MLT1K LTR MaLR 339 578 -10 1510 176 56 4 chr2 176384925 176385192 -76871391 + AluJb SINE Alu 1 281 -31 236 159 23 0 chr2 176385193 176385237 -76871346 + Alu SINE Alu 254 298 -4 209 231 28 28 chr2 176385446 176385554 -76871029 + G-rich Low_complexity Low_complexity 2 109 0 1010 247 4 13 chr2 176385816 176386043 -76870540 + MIR SINE MIR 32 256 -6 235 288 15 0 chr2 176386416 176386482 -76870101 + MIR SINE MIR 196 262 0 4592 147 76 60 chr2 176386519 176386794 -76869789 + L1MC3 LINE L1 6779 7048 -737 183 100 0 0 chr2 176386794 176386824 -76869759 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 4592 147 76 60 chr2 176386824 176387539 -76869044 + L1MC3 LINE L1 7048 7785 0 213 300 0 50 chr2 176387667 176387767 -76868816 - L2 LINE L2 -211 3061 2967 1830 100 8 4 chr2 176387878 176388129 -76868454 - L1PA10 LINE L1 -2 6166 5915 1041 154 44 6 chr2 176388325 176388507 -76868076 - MER20 DNA MER1_type 0 219 31 483 222 0 0 chr2 176388745 176388835 -76867748 - L2 LINE L2 0 3272 3183 3602 44 0 10 chr2 176389436 176389915 -76866668 - L1P LINE L1 -2264 3882 3409 372 348 123 13 chr2 176389951 176390187 -76866396 - L2 LINE L2 -403 2911 2650 704 164 103 152 chr2 176390294 176390624 -76865959 - L1MC4 LINE L1 -369 7673 7360 670 152 8 64 chr2 176390713 176390838 -76865745 - FRAM SINE Alu -58 118 1 1065 207 103 12 chr2 176390961 176391203 -76865380 + MER74A LTR ERVL 295 558 0 331 162 40 0 chr2 176391203 176391277 -76865306 - L1MC4 LINE L1 -692 7350 7274 342 0 0 0 chr2 176391327 176391365 -76865218 + (TG)n Simple_repeat Simple_repeat 2 39 0 294 29 0 0 chr2 176391472 176391507 -76865076 + (CA)n Simple_repeat Simple_repeat 2 36 0 271 301 70 8 chr2 176391694 176391901 -76864682 - L2 LINE L2 -624 2690 2416 214 297 16 0 chr2 176392274 176392338 -76864245 + CT-rich Low_complexity Low_complexity 2 66 0 557 256 19 58 chr2 176394126 176394282 -76862301 - MIR SINE MIR -77 185 36 1684 136 0 0 chr2 176395246 176395489 -76861094 - AluSg/x SINE Alu -3 307 65 756 279 82 19 chr2 176397895 176398214 -76858369 + MLT1J LTR MaLR 1 339 -172 187 186 70 0 chr2 176398537 176398580 -76858003 - MIR SINE MIR -56 206 161 674 125 0 10 chr2 176399351 176399447 -76857136 + FLAM_A SINE Alu 25 119 -23 216 0 0 0 chr2 176400590 176400614 -76855969 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 514 282 144 0 chr2 176400791 176400979 -76855604 + MIR SINE MIR 48 262 0 995 256 153 40 chr2 176401787 176402213 -76854370 - L2 LINE L2 0 3313 2840 23 0 0 0 chr2 176402602 176402625 -76853958 + AT_rich Low_complexity Low_complexity 1 23 0 15693 29 2 0 chr2 176402625 176405266 -76851317 - L1PA3 LINE L1 0 6155 3509 632 171 178 0 chr2 176405401 176405547 -76851036 + FRAM SINE Alu 1 166 -10 355 306 176 24 chr2 176405581 176406006 -76850577 + L2 LINE L2 1584 2073 -1241 207 336 124 29 chr2 176406255 176406496 -76850087 + L2 LINE L2 2244 2507 -807 578 288 31 0 chr2 176406729 176406889 -76849694 + MIR SINE MIR 98 262 0 21 0 0 0 chr2 176407511 176407532 -76849051 + AT_rich Low_complexity Low_complexity 1 21 0 380 296 52 47 chr2 176409529 176409701 -76846882 - MIR SINE MIR -70 192 20 457 285 41 12 chr2 176409886 176410040 -76846543 + L1MC4a LINE L1 5668 5816 -1992 2257 112 0 0 chr2 176410040 176410336 -76846247 + AluSq SINE Alu 1 296 -17 2144 96 7 0 chr2 176410339 176410672 -76845911 + AluY SINE Alu 1 335 0 457 285 41 12 chr2 176410672 176410754 -76845829 + L1MC4a LINE L1 5817 5916 -1892 989 158 34 38 chr2 176412235 176412444 -76844139 - MER3 DNA MER1_type 0 209 2 313 280 0 10 chr2 176412858 176412958 -76843625 + LTR33 LTR ERVL 27 125 -396 230 186 0 0 chr2 176413121 176413164 -76843419 + T-rich Low_complexity Low_complexity 2 44 0 256 204 45 11 chr2 176413171 176413259 -76843324 - Alu SINE Alu -5 295 205 261 0 0 0 chr2 176414170 176414199 -76842384 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 439 229 30 15 chr2 176414428 176414559 -76842024 - L1MD2 LINE L1 -212 6147 6015 2221 58 0 0 chr2 176415660 176415937 -76840646 + L1PA7 LINE L1 5878 6154 0 331 256 183 30 chr2 176416393 176416557 -76840026 + MIR SINE MIR 64 252 -10 228 305 34 119 chr2 176417279 176417456 -76839127 - L2 LINE L2 -107 3165 3004 219 329 123 18 chr2 176417469 176417688 -76838895 - L2 LINE L2 -523 2791 2550 21 0 0 0 chr2 176417844 176417865 -76838718 + AT_rich Low_complexity Low_complexity 1 21 0 538 221 54 30 chr2 176417957 176418133 -76838450 + MER20B DNA MER1_type 29 211 -8 315 331 79 0 chr2 176418188 176418327 -76838256 - MIR SINE MIR 0 262 113 35 0 0 0 chr2 176418707 176418742 -76837841 + AT_rich Low_complexity Low_complexity 1 35 0 274 297 126 87 chr2 176418822 176419179 -76837404 + L2 LINE L2 2894 3264 -8 894 289 78 34 chr2 176419284 176419696 -76836887 - MLT1J LTR MaLR -54 457 28 744 330 38 8 chr2 176419725 176419989 -76836594 + L3 LINE CR1 1049 1320 -257 450 305 84 64 chr2 176422631 176422967 -76833616 + MLT1K LTR MaLR 124 452 -136 339 161 12 25 chr2 176422967 176423048 -76833535 + MER116 DNA Mariner 1 80 0 450 305 84 64 chr2 176423048 176423073 -76833510 + MLT1K LTR MaLR 452 475 -113 2034 138 0 7 chr2 176423073 176423369 -76833214 - AluJo SINE Alu -18 294 1 450 305 84 64 chr2 176423369 176423458 -76833125 + MLT1K LTR MaLR 475 584 -4 364 287 118 46 chr2 176423632 176423827 -76832756 - MIR SINE MIR -41 221 13 2039 126 3 0 chr2 176424433 176424799 -76831784 - AluSg SINE Alu 0 310 1 41 21 0 0 chr2 176424921 176424969 -76831614 + AT_rich Low_complexity Low_complexity 1 48 0 234 289 29 67 chr2 176425492 176425596 -76830987 + MIR3 SINE MIR 104 203 -5 735 186 0 0 chr2 176425880 176425998 -76830585 + FLAM_C SINE Alu 1 118 -15 216 0 0 0 chr2 176426068 176426092 -76830491 + (A)n Simple_repeat Simple_repeat 1 24 0 31 26 0 0 chr2 176426235 176426273 -76830310 + AT_rich Low_complexity Low_complexity 1 38 0 647 292 34 14 chr2 176426291 176426500 -76830083 - MIR SINE MIR -29 233 21 2197 114 0 16 chr2 176427010 176427316 -76829267 + AluSx SINE Alu 1 301 -11 890 227 46 19 chr2 176427362 176427578 -76829005 + MIR SINE MIR 41 262 0 21 0 0 0 chr2 176427587 176427608 -76828975 + AT_rich Low_complexity Low_complexity 1 21 0 265 161 0 0 chr2 176428469 176428525 -76828058 + CT-rich Low_complexity Low_complexity 1 56 0 294 123 0 0 chr2 176428656 176428713 -76827870 + (T)n Simple_repeat Simple_repeat 1 57 0 21 0 0 0 chr2 176428925 176428946 -76827637 + AT_rich Low_complexity Low_complexity 1 21 0 30 59 0 0 chr2 176430140 176430191 -76826392 + AT_rich Low_complexity Low_complexity 1 51 0 447 339 106 17 chr2 176431206 176431386 -76825197 + MER91A DNA MER1_type 1 196 0 13976 18 1 0 chr2 176431866 176434349 -76822234 - L1HS LINE L1 0 6155 3670 387 292 0 0 chr2 176434350 176434487 -76822096 + C-rich Low_complexity Low_complexity 1 137 0 632 323 114 39 chr2 176434610 176435155 -76821428 + HAL1 LINE L1 110 695 -1812 289 317 84 20 chr2 176435354 176435556 -76821027 + HAL1 LINE L1 736 950 -1557 1288 254 163 19 chr2 176435589 176436388 -76820195 + HAL1 LINE L1 1464 2377 -130 764 263 39 16 chr2 176436462 176436717 -76819866 - MIR SINE MIR 0 262 2 1563 188 4 8 chr2 176436925 176437191 -76819392 - AluJo SINE Alu -10 302 38 21066 58 1 2 chr2 176437306 176440804 -76815779 + L1PA5 LINE L1 2650 6149 -5 514 285 15 15 chr2 176442393 176442530 -76814053 + L2 LINE L2 3136 3272 0 341 330 121 13 chr2 176444238 176444462 -76812121 - L2 LINE L2 -6 3266 3019 1879 176 0 3 chr2 176446261 176446574 -76810009 + AluJb SINE Alu 1 312 0 201 74 0 0 chr2 176448921 176448948 -76807635 + (T)n Simple_repeat Simple_repeat 1 27 0 1002 249 21 9 chr2 176449710 176449943 -76806640 + MIR SINE MIR 6 241 -21 25 0 0 0 chr2 176452320 176452345 -76804238 + AT_rich Low_complexity Low_complexity 1 25 0 274 263 42 11 chr2 176452455 176452550 -76804033 - L1ME4a LINE L1 -73 6048 5951 730 268 100 19 chr2 176452589 176453067 -76803516 - L1ME4a LINE L1 -249 5872 5356 293 293 164 0 chr2 176453791 176453907 -76802676 - MIR SINE MIR -56 206 72 427 286 182 13 chr2 176454151 176454305 -76802278 - MER5A DNA MER1_type 0 189 10 206 271 0 0 chr2 176454500 176454548 -76802035 + (TAA)n Simple_repeat Simple_repeat 1 48 0 300 268 138 8 chr2 176454561 176454684 -76801899 - MIR SINE MIR -52 210 72 967 47 8 8 chr2 176455513 176455679 -76800904 + L1PA5 LINE L1 6015 6180 0 219 69 0 0 chr2 176455748 176455777 -76800806 + (CA)n Simple_repeat Simple_repeat 2 30 0 27 62 0 0 chr2 176456082 176456130 -76800453 + AT_rich Low_complexity Low_complexity 1 48 0 907 84 8 0 chr2 176456280 176456411 -76800172 + L1PA5 LINE L1 6022 6153 -1 273 57 0 0 chr2 176456492 176456527 -76800056 + (CA)n Simple_repeat Simple_repeat 2 36 0 403 327 85 0 chr2 176458321 176458486 -76798097 - MIR SINE MIR -55 207 29 357 285 134 42 chr2 176458592 176458950 -76797633 - MARNA DNA Mariner -175 411 21 737 187 0 8 chr2 176459172 176459306 -76797277 + FLAM_C SINE Alu 1 133 0 251 218 51 26 chr2 176459501 176459579 -76797004 + MIR3 SINE MIR 88 167 -41 * 256 235 284 10 chr2 176459572 176459674 -76796909 + L2 LINE L2 3180 3309 -4 2115 155 3 0 chr2 176461781 176462084 -76794499 + AluSx SINE Alu 1 304 -8 1775 175 10 3 chr2 176463070 176463362 -76793221 + AluJo SINE Alu 1 294 -18 2032 132 3 7 chr2 176464123 176464419 -76792164 - AluSx SINE Alu -17 295 1 1203 157 100 71 chr2 176464879 176465159 -76791424 + AluJo SINE Alu 1 288 -24 207 0 0 0 chr2 176467500 176467523 -76789060 + (TAA)n Simple_repeat Simple_repeat 2 24 0 69 0 0 0 chr2 176467685 176467754 -76788829 + AT_rich Low_complexity Low_complexity 1 69 0 1250 220 0 26 chr2 176469168 176469436 -76787147 + AluJo SINE Alu 47 307 -5 332 261 60 45 chr2 176469565 176469699 -76786884 + L1ME4a LINE L1 5972 6107 -14 261 0 0 0 chr2 176470119 176470148 -76786435 + (T)n Simple_repeat Simple_repeat 1 29 0 335 145 53 26 chr2 176470299 176470375 -76786208 + MLT1H LTR MaLR 79 156 -393 351 172 65 32 chr2 176470532 176470625 -76785958 + MLT1H LTR MaLR 454 549 0 1386 127 0 70 chr2 176472473 176472717 -76783866 + AluJb SINE Alu 82 308 -4 675 144 25 15 chr2 176473223 176473428 -76783155 + CT-rich Low_complexity Low_complexity 1 207 0 1787 164 7 16 chr2 176473429 176473734 -76782849 - AluJo SINE Alu -10 302 1 321 26 0 0 chr2 176474988 176475026 -76781557 + (TG)n Simple_repeat Simple_repeat 1 38 0 1951 132 0 7 chr2 176475026 176475307 -76781276 - AluSx SINE Alu -33 279 1 2076 147 0 3 chr2 176475532 176475831 -76780752 - AluSx SINE Alu -14 298 1 607 235 8 15 chr2 176475897 176476029 -76780554 - FLAM_C SINE Alu -2 131 1 217 246 0 0 chr2 176476352 176476409 -76780174 + (TAAA)n Simple_repeat Simple_repeat 2 58 0 201 314 124 0 chr2 176476658 176476779 -76779804 - MIR SINE MIR -6 256 121 292 263 0 0 chr2 176476845 176476902 -76779681 - L2 LINE L2 -62 3210 3154 26 30 0 0 chr2 176477014 176477047 -76779536 + AT_rich Low_complexity Low_complexity 1 33 0 24 32 0 0 chr2 176477325 176477356 -76779227 + AT_rich Low_complexity Low_complexity 1 31 0 500 99 0 12 chr2 176478024 176478105 -76778478 + (TTCC)n Simple_repeat Simple_repeat 3 82 0 282 193 0 0 chr2 176478791 176478848 -76777735 + (TATATG)n Simple_repeat Simple_repeat 2 58 0 270 211 40 13 chr2 176479116 176479192 -76777391 + CT-rich Low_complexity Low_complexity 1 78 0 21 0 0 0 chr2 176480242 176480263 -76776320 + AT_rich Low_complexity Low_complexity 1 21 0 454 255 60 27 chr2 176480776 176480960 -76775623 + MER20B DNA MER1_type 2 191 -592 2161 130 3 32 chr2 176481391 176481737 -76774846 - MER1B DNA MER1_type 0 337 2 843 129 8 0 chr2 176482173 176482297 -76774286 - AluSq/x SINE Alu -187 125 1 583 259 138 0 chr2 176482497 176482686 -76773897 + MIR SINE MIR 14 228 -34 1688 62 0 0 chr2 176486027 176486236 -76770347 - L1PA7 LINE L1 0 6154 5946 257 229 0 0 chr2 176486954 176487002 -76769581 - MIR3 SINE MIR -11 197 150 448 275 44 55 chr2 176487989 176488227 -76768356 - MIR SINE MIR -12 250 9 644 223 8 0 chr2 176488761 176488891 -76767692 - AluJb SINE Alu -11 301 171 347 117 0 67 chr2 176488919 176488979 -76767604 + AluY SINE Alu 120 175 -126 667 12 0 0 chr2 176489084 176489166 -76767417 - L1PA3 LINE L1 0 6155 6074 723 153 93 0 chr2 176489166 176489284 -76767299 - FLAM_C SINE Alu -12 131 3 199 339 15 0 chr2 176490803 176490868 -76765715 + MIR3 SINE MIR 142 207 -1 26637 40 39 5 chr2 176491514 176495072 -76761511 + L1P LINE L1 2 3680 -2466 7045 210 25 31 chr2 176495309 176495851 -76760732 - L1MB4 LINE L1 -284 5896 5352 2161 138 0 3 chr2 176495851 176496162 -76760421 - AluSq SINE Alu -2 311 2 7045 210 25 31 chr2 176496162 176496944 -76759639 - L1MB4 LINE L1 -828 5352 4567 949 200 0 0 chr2 176496944 176497099 -76759484 - FRAM SINE Alu -11 155 1 7045 210 25 31 chr2 176497099 176497114 -76759469 - L1MB4 LINE L1 -1613 4567 4553 1306 182 49 66 chr2 176497114 176497400 -76759183 - AluJb SINE Alu -31 281 1 7045 210 25 31 chr2 176497400 176498586 -76757997 - L1MB4 LINE L1 -1627 4553 3389 219 85 0 85 chr2 176500110 176500157 -76756426 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 543 155 0 21 chr2 176501071 176501168 -76755415 - FRAM SINE Alu -14 162 68 180 0 0 0 chr2 176501281 176501301 -76755282 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 971 133 0 7 chr2 176501301 176501444 -76755139 - FRAM SINE Alu -30 146 5 1764 166 64 5 chr2 176501605 176501978 -76754605 + Charlie1 DNA MER1_type 1934 2328 -433 2352 88 10 7 chr2 176502027 176502333 -76754250 + AluSx SINE Alu 3 309 -3 1571 201 31 7 chr2 176502939 176503232 -76753351 + AluJo SINE Alu 1 300 -12 484 249 70 25 chr2 176503266 176503469 -76753114 + L1M4c LINE L1 975 1168 -5214 1984 144 0 13 chr2 176503469 176503774 -76752809 + AluJb SINE Alu 1 301 -11 484 249 70 25 chr2 176503774 176504031 -76752552 + L1M4c LINE L1 1168 3688 -2694 437 244 35 0 chr2 176504041 176504156 -76752427 + ERVL LTR ERVL 4332 4450 -1314 214 308 66 22 chr2 176505152 176505243 -76751340 + L2 LINE L2 3182 3276 -37 23 68 0 0 chr2 176505866 176505910 -76750673 + AT_rich Low_complexity Low_complexity 1 44 0 207 0 0 0 chr2 176507541 176507564 -76749019 + (CA)n Simple_repeat Simple_repeat 2 24 0 279 0 0 0 chr2 176507762 176507793 -76748790 + (CAT)n Simple_repeat Simple_repeat 2 32 0 972 249 25 8 chr2 176507795 176508032 -76748551 - MIR SINE MIR -10 252 12 802 10 29 0 chr2 176508610 176508712 -76747871 + (GAAA)n Simple_repeat Simple_repeat 4 108 0 305 254 66 163 chr2 176509861 176510180 -76746403 - L2 LINE L2 -1386 1928 1641 22 35 0 0 chr2 176511038 176511067 -76745516 + AT_rich Low_complexity Low_complexity 1 29 0 1796 216 49 68 chr2 176511783 176511948 -76744635 + L1MC5 LINE L1 7187 7354 -607 972 179 123 0 chr2 176511948 176512143 -76744440 + MER20 DNA MER1_type 1 219 0 1796 216 49 68 chr2 176512143 176512712 -76743871 + L1MC5 LINE L1 7354 7907 -54 193 241 74 19 chr2 176512825 176512879 -76743704 + MIR SINE MIR 18 74 -188 25 0 0 0 chr2 176513423 176513448 -76743135 + AT_rich Low_complexity Low_complexity 1 25 0 2230 76 3 0 chr2 176514266 176514604 -76741979 + L1PA8 LINE L1 5675 6169 -3 215 283 0 0 chr2 176514645 176514698 -76741885 - L2 LINE L2 -38 3234 3182 1882 152 0 60 chr2 176515230 176515599 -76740984 + MER7A DNA MER2_type 1 345 -1 31 44 0 0 chr2 176515661 176515706 -76740877 + AT_rich Low_complexity Low_complexity 1 45 0 1667 113 12 4 chr2 176515770 176516010 -76740573 + AluSq SINE Alu 1 242 -71 186 0 28 56 chr2 176516544 176516580 -76740003 + (TTTTA)n Simple_repeat Simple_repeat 2 36 0 1809 151 4 0 chr2 176516582 176516853 -76739730 - AluJo SINE Alu -30 282 11 753 235 55 0 chr2 176516995 176517195 -76739388 - MLT1L LTR MaLR 0 615 405 618 334 113 19 chr2 176517627 176518094 -76738489 + L2 LINE L2 1879 2389 -925 285 304 24 120 chr2 176518337 176518504 -76738079 + L2 LINE L2 2424 2561 -753 1841 137 3 57 chr2 176518504 176518819 -76737764 - AluJb SINE Alu -14 298 1 285 304 24 120 chr2 176518819 176518901 -76737682 + L2 LINE L2 2561 2649 -665 498 330 54 68 chr2 176519162 176519498 -76737085 + L2 LINE L2 2942 3272 0 1352 184 9 87 chr2 176520221 176520542 -76736041 - AluJo SINE Alu -14 298 3 730 73 0 0 chr2 176520829 176520925 -76735658 + L1PA5 LINE L1 1 96 -6050 35245 57 5 2 chr2 176520925 176526437 -76730146 + L1PA5 LINE L1 623 6154 0 430 211 33 46 chr2 176526760 176526912 -76729671 - L1ME4a LINE L1 -1 6120 5971 22 35 0 0 chr2 176527224 176527253 -76729330 + AT_rich Low_complexity Low_complexity 1 29 0 609 102 54 0 chr2 176728108 176728274 -76528309 + (TA)n Simple_repeat Simple_repeat 1 175 0 36 0 0 0 chr2 176728274 176728310 -76528273 + AT_rich Low_complexity Low_complexity 1 36 0 631 83 65 0 chr2 176728312 176728481 -76528102 + (TA)n Simple_repeat Simple_repeat 1 180 0 2094 136 0 0 chr2 176728481 176728768 -76527815 - AluSx SINE Alu -25 287 1 25 0 0 0 chr2 176729454 176729479 -76527104 + AT_rich Low_complexity Low_complexity 1 25 0 4633 121 39 42 chr2 176729755 176730059 -76526524 + L1MA10 LINE L1 5477 5781 -553 1705 151 101 3 chr2 176730059 176730376 -76526207 - MER7A DNA MER2_type 0 346 1 4633 121 39 42 chr2 176730376 176730713 -76525870 + L1MA10 LINE L1 5781 6117 -217 789 197 0 0 chr2 176730713 176730840 -76525743 + FLAM_A SINE Alu 1 127 -6 4633 121 39 42 chr2 176730840 176731047 -76525536 + L1MA10 LINE L1 6117 6323 -11 904 228 29 29 chr2 176731326 176731607 -76524976 + L1M4 LINE L1 3767 4047 -2099 1708 104 4 0 chr2 176731607 176731837 -76524746 + AluSp SINE Alu 82 312 -1 1280 221 19 0 chr2 176731866 176732124 -76524459 + MLT1E LTR MaLR 325 587 -6 907 176 0 6 chr2 176732124 176732283 -76524300 + AluJo SINE Alu 124 281 -31 461 213 80 112 chr2 176732566 176732880 -76523703 + MLT1E1-int LTR MaLR 1064 1367 -4 1142 204 145 51 chr2 176732884 176733431 -76523152 + MLT1E1 LTR MaLR 1 608 -16 2035 131 0 26 chr2 176733557 176733863 -76522720 + AluSx SINE Alu 5 302 -10 2527 156 25 29 chr2 176733863 176734377 -76522206 - L1MC2 LINE L1 -19 6325 5814 817 131 19 38 chr2 176734377 176734528 -76522055 - L1PA16 LINE L1 0 6166 6010 792 196 17 92 chr2 176734543 176734578 -76522005 - L1ME2 LINE L1 -11 6153 6117 2581 11 0 0 chr2 176734578 176734903 -76521680 - AluY SINE Alu 0 325 1 792 196 17 92 chr2 176734903 176735106 -76521477 - L1ME2 LINE L1 -47 6117 5932 1350 156 39 102 chr2 176735141 176735551 -76521032 - L1ME2 LINE L1 -216 5950 5567 282 281 0 0 chr2 176735551 176735615 -76520968 + L2 LINE L2 3250 3313 0 695 187 14 78 chr2 176735836 176735941 -76520642 + L1MA4 LINE L1 6023 6108 -192 731 178 0 30 chr2 176735941 176736076 -76520507 - FLAM_C SINE Alu -2 131 1 695 187 14 78 chr2 176736076 176736189 -76520394 + L1MA4 LINE L1 6108 6227 -73 420 296 17 17 chr2 176736325 176736440 -76520143 - L2 LINE L2 -15 3298 3184 21 57 0 0 chr2 176736596 176736631 -76519952 + AT_rich Low_complexity Low_complexity 1 35 0 986 203 24 28 chr2 176736905 176737117 -76519466 - MER21B LTR ERV1 -555 308 98 413 245 0 20 chr2 176737156 176737254 -76519329 - MER21B LTR ERV1 -767 96 1 8026 231 50 30 chr2 176737254 176737796 -76518787 - L1MD2 LINE L1 -456 5903 5373 1713 174 3 37 chr2 176737796 176738118 -76518465 - AluJo SINE Alu -1 311 1 8026 231 50 30 chr2 176738118 176738709 -76517874 - L1MD2 LINE L1 -986 5373 4795 744 0 0 0 chr2 176738709 176738795 -76517788 - L1PA3 LINE L1 -3 6152 6067 8026 231 50 30 chr2 176738795 176740001 -76516582 - L1MD2 LINE L1 -1564 4795 3615 2447 74 0 0 chr2 176740001 176740298 -76516285 - AluY SINE Alu -2 309 13 8026 231 50 30 chr2 176740298 176741420 -76515163 - L1MD2 LINE L1 -2744 3615 2374 2460 78 0 0 chr2 176741561 176741855 -76514728 + AluSc SINE Alu 1 294 -15 658 228 0 0 chr2 176741949 176742072 -76514511 + FLAM_A SINE Alu 1 123 -10 25 65 0 0 chr2 176742073 176742119 -76514464 + AT_rich Low_complexity Low_complexity 1 46 0 188 388 12 12 chr2 176742594 176742674 -76513909 - L2 LINE L2 -45 3268 3189 284 323 105 8 chr2 176742821 176742954 -76513629 - MIR SINE MIR -115 147 2 21 36 0 0 chr2 176743212 176743240 -76513343 + AT_rich Low_complexity Low_complexity 1 28 0 865 133 0 22 chr2 176743786 176743921 -76512662 + FLAM_C SINE Alu 1 132 -1 330 266 112 77 chr2 176744366 176744509 -76512074 - L2 LINE L2 0 3272 3125 1486 192 52 11 chr2 176745008 176745294 -76511289 - AluJb SINE Alu -14 298 1 45 34 0 0 chr2 176745736 176745795 -76510788 + AT_rich Low_complexity Low_complexity 1 59 0 1029 92 0 0 chr2 176745809 176745939 -76510644 + AluY SINE Alu 5 134 -177 2626 27 0 0 chr2 176745939 176746232 -76510351 + AluYa5 SINE Alu 1 293 -18 1601 178 7 14 chr2 176746391 176746666 -76509917 + AluJo SINE Alu 3 275 -37 671 272 46 2 chr2 176747284 176747479 -76509104 - MIR SINE MIR -38 224 28 377 264 108 116 chr2 176747761 176747887 -76508696 - MIR SINE MIR -12 250 125 2298 55 41 7 chr2 176747887 176748180 -76508403 + AluY SINE Alu 1 303 -8 377 264 108 116 chr2 176748180 176748303 -76508280 - MIR SINE MIR -137 125 3 302 254 48 24 chr2 176748581 176748707 -76507876 + L1MC5 LINE L1 7797 7925 -36 271 197 131 0 chr2 176750453 176750514 -76506069 + L2 LINE L2 2310 2378 -936 242 261 352 23 chr2 176750699 176750795 -76505788 + MIR SINE MIR 23 86 -176 1412 168 18 95 chr2 176750795 176751122 -76505461 + AluJo SINE Alu 1 302 -10 242 261 352 23 chr2 176751122 176751201 -76505382 + MIR SINE MIR 86 256 -6 454 286 199 29 chr2 176751279 176751555 -76505028 + L2 LINE L2 2988 3310 -3 636 267 43 0 chr2 176751555 176751716 -76504867 - MIR SINE MIR -16 246 79 274 203 13 13 chr2 176751771 176751850 -76504733 + MER116 DNA Mariner 2 80 0 717 207 0 14 chr2 176752729 176752874 -76503709 + FLAM_C SINE Alu 1 143 0 27 62 0 0 chr2 176752953 176753001 -76503582 + AT_rich Low_complexity Low_complexity 1 48 0 201 250 0 0 chr2 176753323 176753367 -76503216 + T-rich Low_complexity Low_complexity 4 47 0 928 286 114 24 chr2 176753767 176754222 -76502361 + MER21B LTR ERV1 317 812 -51 836 261 12 12 chr2 176754236 176754489 -76502094 + L1ME1 LINE L1 5896 6148 -18 1446 292 119 37 chr2 176754510 176755133 -76501450 + L3 LINE CR1 903 1576 -1 472 217 217 0 chr2 176756120 176756304 -76500279 + L1ME3A LINE L1 5939 6162 -8 2368 82 0 28 chr2 176756328 176756647 -76499936 + AluSq SINE Alu 1 310 -3 349 233 130 34 chr2 176757032 176757178 -76499405 + L1ME4a LINE L1 5945 6104 -17 2211 110 7 7 chr2 176757206 176757515 -76499068 - AluSg SINE Alu -1 309 1 783 229 10 0 chr2 176757585 176757777 -76498806 - L1M4 LINE L1 -869 5277 5084 351 278 21 10 chr2 176757847 176757944 -76498639 - MIR SINE MIR -108 154 57 197 95 0 48 chr2 176758009 176758051 -76498532 + (TTTTC)n Simple_repeat Simple_repeat 2 41 0 1920 98 3 71 chr2 176758065 176758360 -76498223 + AluSx SINE Alu 1 275 -37 292 77 0 0 chr2 176758361 176758400 -76498183 - Alu SINE Alu -260 39 1 189 0 0 0 chr2 176759086 176759107 -76497476 + (A)n Simple_repeat Simple_repeat 1 21 0 1636 179 11 7 chr2 176759107 176759392 -76497191 + AluJo SINE Alu 1 286 -26 41907 42 1 1 chr2 176759413 176765566 -76491017 + L1PA4 LINE L1 1 6155 0 252 254 0 0 chr2 176765727 176765782 -76490801 - L2 LINE L2 0 3313 3259 1219 175 18 43 chr2 176766111 176766391 -76490192 - L1MB7 LINE L1 -8 6176 5904 1474 160 32 53 chr2 176766404 176766708 -76489875 - AluJo SINE Alu 0 306 9 181 347 0 0 chr2 176767250 176767345 -76489238 - MIR SINE MIR -79 183 89 2256 95 17 0 chr2 176767402 176767697 -76488886 + AluSx SINE Alu 1 300 -12 528 308 0 8 chr2 176768537 176768667 -76487916 - MER5B DNA MER1_type -9 169 41 1134 192 120 39 chr2 176768956 176769266 -76487317 - MLT1A1 LTR MaLR 0 593 25 267 286 0 14 chr2 176769628 176769698 -76486885 - L2 LINE L2 -9 3304 3236 426 85 0 0 chr2 176770511 176770570 -76486013 + (CA)n Simple_repeat Simple_repeat 2 60 0 1320 100 0 0 chr2 176771657 176771827 -76484756 - AluSq SINE Alu -143 170 1 683 239 38 16 chr2 176771827 176772011 -76484572 - MLT1E LTR MaLR -355 238 51 697 182 86 7 chr2 176772168 176772460 -76484123 - Charlie1 DNA MER1_type -2 2759 2421 1353 193 91 0 chr2 176772467 176772584 -76483999 + AluJo SINE Alu 3 108 -204 186 43 0 0 chr2 176772584 176772607 -76483976 + (TAAAA)n Simple_repeat Simple_repeat 3 25 0 1353 193 91 0 chr2 176772607 176772743 -76483840 + AluJo SINE Alu 108 279 -33 279 0 0 0 chr2 176772746 176772777 -76483806 + (CAA)n Simple_repeat Simple_repeat 3 33 0 572 153 81 0 chr2 176772779 176772890 -76483693 - Charlie1 DNA MER1_type -2596 165 46 318 293 119 30 chr2 176772949 176773100 -76483483 - L2 LINE L2 -1 3271 3135 216 67 0 0 chr2 176773100 176773130 -76483453 + (ATTTG)n Simple_repeat Simple_repeat 2 31 0 2282 73 3 0 chr2 176773130 176773419 -76483164 - AluSq SINE Alu -23 290 1 318 293 119 30 chr2 176773419 176773557 -76483026 - L2 LINE L2 -136 3136 2872 3780 129 3 35 chr2 176773642 176774262 -76482321 + LTR26 LTR ERV1 1 600 -3 1563 139 0 66 chr2 176774263 176774550 -76482033 - AluJo SINE Alu -44 268 1 276 319 22 51 chr2 176775303 176775441 -76481142 + MIR SINE MIR 20 153 -55 2623 42 13 0 chr2 176776003 176776309 -76480274 - AluSp SINE Alu -2 311 2 182 333 116 36 chr2 176776366 176776504 -76480079 - L2 LINE L2 -7 3306 3158 201 370 37 0 chr2 176776610 176776691 -76479892 - L2 LINE L2 -247 3025 2942 200 372 93 11 chr2 176776751 176776934 -76479649 - L2 LINE L2 -458 2856 2659 608 129 0 0 chr2 176778703 176778788 -76477795 - AluS SINE Alu -227 85 1 1768 172 3 3 chr2 176779433 176779718 -76476865 + AluJo SINE Alu 1 285 -27 22 0 0 0 chr2 176780134 176780156 -76476427 + AT_rich Low_complexity Low_complexity 1 22 0 432 259 42 74 chr2 176780589 176780778 -76475805 - MIR SINE MIR -3 259 77 587 243 119 21 chr2 176780979 176781222 -76475361 + LTR33 LTR ERVL 1 267 -254 225 242 113 24 chr2 176781609 176781733 -76474850 + MER103 DNA DNA 19 153 -13 22 0 0 0 chr2 176782556 176782578 -76474005 + AT_rich Low_complexity Low_complexity 1 22 0 36 77 0 0 chr2 176782965 176783043 -76473540 + AT_rich Low_complexity Low_complexity 1 78 0 2724 105 152 17 chr2 176783506 176783972 -76472611 - MER1A DNA MER1_type 0 529 1 910 211 0 29 chr2 176784317 176784488 -76472095 - FRAM SINE Alu 0 166 1 1303 124 0 11 chr2 176784511 176784688 -76471895 + AluSx SINE Alu 1 175 -137 1446 129 0 5 chr2 176784790 176784992 -76471591 - AluSc SINE Alu -108 201 1 2465 37 0 74 chr2 176785006 176785332 -76471251 - AluY SINE Alu -8 303 2 2873 137 11 35 chr2 176785459 176785999 -76470584 - L1MB7 LINE L1 -19 6165 5639 197 200 36 0 chr2 176786436 176786491 -76470092 + CT-rich Low_complexity Low_complexity 5 61 0 2039 118 0 0 chr2 176786622 176786893 -76469690 - AluSx SINE Alu -20 292 22 5289 92 23 10 chr2 176787262 176788042 -76468541 + SVA Other Other 79 868 -518 3286 92 9 51 chr2 176788097 176788727 -76467856 + SVA Other Other 433 1036 -350 22 80 0 0 chr2 176788743 176788793 -76467790 + AT_rich Low_complexity Low_complexity 1 50 0 1913 126 22 4 chr2 176789022 176789320 -76467263 + AluSx SINE Alu 1 303 0 238 196 186 69 chr2 176790332 176790434 -76466149 - L2 LINE L2 0 3313 3200 2313 94 0 0 chr2 176790544 176790841 -76465742 + AluSg SINE Alu 1 297 -13 29 28 0 0 chr2 176791301 176791337 -76465246 + AT_rich Low_complexity Low_complexity 1 36 0 808 135 0 23 chr2 176793475 176793608 -76462975 - FLAM_C SINE Alu -13 130 1 278 255 75 19 chr2 176795181 176795287 -76461296 - MIR3 SINE MIR 0 208 97 660 279 113 9 chr2 176795442 176795664 -76460919 + MIR SINE MIR 18 262 0 25 0 0 0 chr2 176796186 176796211 -76460372 + AT_rich Low_complexity Low_complexity 1 25 0 2438 88 3 0 chr2 176797284 176797591 -76458992 - AluSp SINE Alu -5 308 1 2163 98 34 0 chr2 176798998 176799294 -76457289 + AluSp SINE Alu 1 306 -7 1756 154 0 4 chr2 176799579 176799851 -76456732 + AluSx SINE Alu 1 271 -41 1686 145 35 42 chr2 176800949 176801238 -76455345 - AluJo SINE Alu -25 287 1 24 32 0 0 chr2 176801391 176801422 -76455161 + AT_rich Low_complexity Low_complexity 1 31 0 419 242 143 25 chr2 176801661 176801905 -76454678 + L1ME4a LINE L1 5811 6083 -38 401 89 0 0 chr2 176801910 176801966 -76454617 - Alu SINE Alu -13 299 244 22 35 0 0 chr2 176801982 176802011 -76454572 + AT_rich Low_complexity Low_complexity 1 29 0 1137 71 0 7 chr2 176802011 176802152 -76454431 - AluSq/x SINE Alu -173 140 1 1080 167 39 143 chr2 176802258 176802411 -76454172 - AluJo SINE Alu -2 300 133 513 0 0 0 chr2 176802411 176802468 -76454115 + (TG)n Simple_repeat Simple_repeat 2 58 0 1080 167 39 143 chr2 176802468 176802534 -76454049 - AluJo SINE Alu -169 133 125 474 18 0 0 chr2 176802534 176802589 -76453994 + (TG)n Simple_repeat Simple_repeat 1 55 0 1080 167 39 143 chr2 176802589 176802703 -76453880 - AluJo SINE Alu -177 125 1 469 141 0 0 chr2 176802715 176802786 -76453797 - AluS SINE Alu -17 292 222 2267 102 20 0 chr2 176802976 176803280 -76453303 - AluSx SINE Alu -2 310 1 453 113 75 0 chr2 176803532 176803612 -76452971 + AluS SINE Alu 223 308 -1 184 240 280 13 chr2 176803618 176803693 -76452890 + MER5A DNA MER1_type 84 178 -11 682 226 5 68 chr2 176804148 176804297 -76452286 + MER5B DNA MER1_type 1 137 -41 2392 99 0 6 chr2 176804297 176804611 -76451972 - AluSx SINE Alu 0 312 1 682 226 5 68 chr2 176804611 176804651 -76451932 + MER5B DNA MER1_type 137 178 0 737 247 6 6 chr2 176804860 176805038 -76451545 - MER5B DNA MER1_type 0 178 1 883 181 30 0 chr2 176805129 176805295 -76451288 + MER5B DNA MER1_type 4 174 -4 868 222 23 12 chr2 176805309 176805480 -76451103 + MER5A DNA MER1_type 17 189 0 23 0 0 0 chr2 176805951 176805974 -76450609 + AT_rich Low_complexity Low_complexity 1 23 0 1974 118 90 0 chr2 176806007 176806286 -76450297 - AluSx SINE Alu -8 304 1 222 303 76 0 chr2 176806700 176806766 -76449817 - L2 LINE L2 -12 3260 3190 25 0 0 0 chr2 176807905 176807930 -76448653 + AT_rich Low_complexity Low_complexity 1 25 0 704 82 90 8 chr2 176808843 176808965 -76447618 + L1MB7 LINE L1 6037 6168 -16 1447 146 69 40 chr2 176809084 176809359 -76447224 + MER1B DNA MER1_type 57 339 0 187 200 0 25 chr2 176810086 176810126 -76446457 + L2 LINE L2 3272 3310 -3 3930 250 85 24 chr2 176810195 176811342 -76445241 + L2 LINE L2 1736 2951 -363 935 154 40 0 chr2 176811885 176812034 -76444549 - AluJb SINE Alu -10 302 148 23 0 0 0 chr2 176812060 176812083 -76444500 + AT_rich Low_complexity Low_complexity 1 23 0 888 194 63 24 chr2 176813380 176813632 -76442951 + L1MC5 LINE L1 6972 7233 -728 1562 153 85 27 chr2 176813726 176814020 -76442563 + AluJb SINE Alu 1 311 -1 242 189 22 178 chr2 176814075 176814260 -76442323 + L1MC5 LINE L1 7274 7429 -532 341 153 202 57 chr2 176814787 176814911 -76441672 + L1MC5 LINE L1 7639 7780 -181 651 291 68 38 chr2 176814977 176815214 -76441369 + MIR SINE MIR 5 248 -14 301 286 67 19 chr2 176815290 176815395 -76441188 + L1ME4a LINE L1 5765 5874 -247 1421 199 21 78 chr2 176815400 176815481 -76441102 + MLT1A1 LTR MaLR 1 85 -280 2109 133 0 40 chr2 176815481 176815803 -76440780 + AluJb SINE Alu 1 309 -3 1421 199 21 78 chr2 176815803 176816038 -76440545 + MLT1A1 LTR MaLR 85 294 -71 2421 78 10 0 chr2 176816038 176816346 -76440237 - AluSx SINE Alu -1 311 1 1421 199 21 78 chr2 176816346 176816415 -76440168 + MLT1A1 LTR MaLR 294 365 0 688 188 0 8 chr2 176816628 176816745 -76439838 - FLAM_C SINE Alu -16 117 2 1196 171 44 0 chr2 176816758 176816993 -76439590 - AluJo SINE Alu 0 312 69 695 182 130 39 chr2 176816995 176817026 -76439557 - AluJo SINE Alu -144 168 141 416 19 19 0 chr2 176817026 176817079 -76439504 + (TTTA)n Simple_repeat Simple_repeat 1 54 0 695 182 130 39 chr2 176817079 176817201 -76439382 - AluJo SINE Alu -171 141 1 353 273 303 8 chr2 176817292 176817556 -76439027 - L3 LINE CR1 -35 1542 1201 840 88 48 40 chr2 176817585 176817710 -76438873 + FLAM_C SINE Alu 1 126 -7 534 178 164 20 chr2 176817714 176817866 -76438717 - MIR SINE MIR 0 262 89 604 319 191 24 chr2 176817879 176818418 -76438165 - L3 LINE CR1 -372 1205 577 21 0 0 0 chr2 176818583 176818604 -76437979 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 176818933 176818955 -76437628 + AT_rich Low_complexity Low_complexity 1 22 0 2391 78 3 10 chr2 176818967 176819275 -76437308 - AluSp SINE Alu -5 308 3 2276 103 7 0 chr2 176819986 176820287 -76436296 + AluSp SINE Alu 1 303 -10 301 237 74 67 chr2 176820406 176820541 -76436042 + L1ME4a LINE L1 5768 5903 -263 2079 149 0 13 chr2 176820575 176820891 -76435692 + AluSx SINE Alu 1 312 0 900 139 39 0 chr2 176820917 176821046 -76435537 + AluJo SINE Alu 1 134 -178 402 204 63 63 chr2 176821062 176821076 -76435507 + L1ME4a LINE L1 5929 5942 -179 1868 157 17 0 chr2 176821076 176821370 -76435213 + AluJo SINE Alu 1 299 -13 402 204 63 63 chr2 176821370 176821546 -76435037 + L1ME4a LINE L1 5941 6119 -2 352 260 79 66 chr2 176821876 176822103 -76434480 + L1ME3A LINE L1 5941 6170 0 611 299 109 0 chr2 176822187 176822398 -76434185 - MIR SINE MIR -21 241 8 183 129 0 0 chr2 176823083 176823114 -76433469 + (CATATA)n Simple_repeat Simple_repeat 6 36 0 1201 261 41 37 chr2 176823402 176823861 -76432722 + L2 LINE L2 2813 3273 -40 789 143 8 0 chr2 176824174 176824293 -76432290 + FLAM_C SINE Alu 1 120 -13 233 303 0 20 chr2 176824477 176824576 -76432007 + L1MC4 LINE L1 7399 7495 -547 * 316 285 81 6 chr2 176824560 176824732 -76431851 + L1MC5 LINE L1 7311 7495 -466 2438 75 3 0 chr2 176824772 176825064 -76431519 + AluSp SINE Alu 1 293 -20 501 307 98 14 chr2 176825418 176825858 -76430725 + L1MC4 LINE L1 7566 8042 0 2142 127 0 3 chr2 176825878 176826185 -76430398 + AluSx SINE Alu 1 306 -6 751 161 0 0 chr2 176826693 176826811 -76429772 + FLAM_C SINE Alu 1 118 -25 923 170 16 28 chr2 176827521 176827703 -76428880 - AluJo SINE Alu -13 299 120 2782 148 55 33 chr2 176828392 176828934 -76427649 - MER21A LTR ERV1 0 931 378 869 184 166 5 chr2 176828941 176829164 -76427419 - MER21A LTR ERV1 -667 264 6 1982 93 51 55 chr2 176829203 176829514 -76427069 + AluSg SINE Alu 1 310 0 288 120 0 0 chr2 176829593 176829643 -76426940 + (A)n Simple_repeat Simple_repeat 1 50 0 23 33 0 0 chr2 176830007 176830037 -76426546 + AT_rich Low_complexity Low_complexity 1 30 0 2316 98 3 3 chr2 176830047 176830354 -76426229 + AluSx SINE Alu 1 307 -5 2424 55 0 10 chr2 176830410 176830700 -76425883 + AluY SINE Alu 1 287 -24 2317 69 13 28 chr2 176830710 176831028 -76425555 + AluSp SINE Alu 1 313 0 32 0 0 23 chr2 176831045 176831068 -76425515 + AT_rich Low_complexity Low_complexity 1 24 -18 1783 164 3 7 chr2 176831068 176831361 -76425222 - AluJo SINE Alu -20 292 1 32 0 0 23 chr2 176831361 176831380 -76425203 + AT_rich Low_complexity Low_complexity 24 42 0 816 255 120 46 chr2 176831403 176831626 -76424957 + L1ME4a LINE L1 5484 5689 -432 706 147 15 88 chr2 176831626 176831762 -76424821 - FLAM_A SINE Alu -3 130 5 816 255 120 46 chr2 176831762 176832066 -76424517 + L1ME4a LINE L1 5689 6058 -63 1579 193 0 0 chr2 176832066 176832336 -76424247 - AluJo SINE Alu -5 307 38 816 255 120 46 chr2 176832336 176832372 -76424211 + L1ME4a LINE L1 6058 6090 -31 1606 207 118 40 chr2 176832714 176833109 -76423474 + L1ME3A LINE L1 5470 5914 -256 1878 157 14 0 chr2 176833109 176833402 -76423181 + AluJb SINE Alu 1 297 -15 1606 207 118 40 chr2 176833402 176833508 -76423075 + L1ME3A LINE L1 5914 6010 -160 2635 143 10 55 chr2 176834002 176834497 -76422086 + L1PB3 LINE L1 5676 6148 -6 2035 135 16 0 chr2 176834519 176834823 -76421760 + AluSx SINE Alu 1 309 -3 23 54 0 0 chr2 176834823 176834860 -76421723 + AT_rich Low_complexity Low_complexity 1 37 0 216 0 0 0 chr2 176834866 176834890 -76421693 + (A)n Simple_repeat Simple_repeat 1 24 0 2381 70 0 17 chr2 176835236 176835538 -76421045 + AluY SINE Alu 1 297 -14 1329 122 43 154 chr2 176835562 176835907 -76420676 + AluJo SINE Alu 5 311 -1 2250 132 0 0 chr2 176835975 176836285 -76420298 + AluSx SINE Alu 2 311 -1 264 346 67 19 chr2 176836879 176836983 -76419600 - L2 LINE L2 -1 3271 3163 528 181 0 0 chr2 176837538 176837621 -76418962 + AluJo SINE Alu 54 136 -176 222 195 0 0 chr2 176837623 176837664 -76418919 + A-rich Low_complexity Low_complexity 3 43 0 1795 146 4 0 chr2 176837777 176838052 -76418531 + AluJb SINE Alu 31 306 -6 1419 120 176 19 chr2 176838053 176838138 -76418445 + AluSg SINE Alu 1 71 -239 2033 106 0 11 chr2 176838138 176838451 -76418132 + AluSx SINE Alu 6 315 0 1419 120 176 19 chr2 176838451 176838631 -76417952 + AluSg SINE Alu 71 309 -1 1926 102 10 69 chr2 176839870 176840035 -76416548 - AluSx SINE Alu -26 286 146 2403 93 0 3 chr2 176840035 176840346 -76416237 - AluSq SINE Alu -3 310 1 1926 102 10 69 chr2 176840346 176840484 -76416099 - AluSx SINE Alu -166 146 1 2271 88 7 0 chr2 176840572 176840868 -76415715 - AluSp SINE Alu -15 298 1 1539 177 50 7 chr2 176841014 176841313 -76415270 - AluJb SINE Alu 0 312 1 827 104 128 0 chr2 176842533 176842658 -76413925 + AluSg/x SINE Alu 156 296 -14 268 176 69 0 chr2 176843007 176843109 -76413474 + (TTAA)n Simple_repeat Simple_repeat 3 111 0 354 105 0 76 chr2 176843113 176843603 -76412980 + (TTTA)n Simple_repeat Simple_repeat 1 452 0 2190 122 3 3 chr2 176843651 176843963 -76412620 - AluSx SINE Alu 0 312 1 940 191 53 36 chr2 176844089 176844440 -76412143 + LTR40b LTR ERVL 60 462 0 376 294 90 9 chr2 176844451 176844603 -76411980 - MIR SINE MIR -53 209 46 26 98 0 0 chr2 176844835 176844917 -76411666 + AT_rich Low_complexity Low_complexity 1 82 0 922 242 206 12 chr2 176845183 176845601 -76410982 + L1ME3A LINE L1 5672 6170 0 301 287 103 29 chr2 176845606 176845742 -76410841 + L1MC5 LINE L1 7508 7653 -308 490 204 0 0 chr2 176845752 176845840 -76410743 - FLAM_A SINE Alu -10 132 45 28 0 0 0 chr2 176845840 176845868 -76410715 + AT_rich Low_complexity Low_complexity 1 28 0 7461 84 24 11 chr2 176845868 176846376 -76410207 - L1MA1 LINE L1 -6 6296 5796 2381 69 16 3 chr2 176846376 176846679 -76409904 - AluSp SINE Alu -6 307 1 2662 51 0 0 chr2 176846679 176846990 -76409593 - AluY SINE Alu 0 311 1 7461 84 24 11 chr2 176846990 176847594 -76408989 - L1MA1 LINE L1 -505 5797 5168 424 194 15 0 chr2 176847596 176847663 -76408920 - AluSc SINE Alu -124 185 118 711 208 71 12 chr2 176847671 176847884 -76408699 + L1MC5 LINE L1 7713 7995 0 1554 176 4 0 chr2 176847897 176848152 -76408431 + AluJb SINE Alu 39 294 -18 2252 106 3 0 chr2 176848263 176848555 -76408028 + AluSg SINE Alu 1 293 -17 858 165 0 8 chr2 176849939 176850139 -76406444 + FLAM_C SINE Alu 2 200 0 2279 95 0 3 chr2 176850144 176850438 -76406145 + AluSg1 SINE Alu 1 293 -16 2202 118 0 0 chr2 176850997 176851294 -76405289 + AluSx SINE Alu 4 300 -12 222 245 0 0 chr2 176851738 176851787 -76404796 + T-rich Low_complexity Low_complexity 1 49 0 2151 133 0 0 chr2 176852101 176852402 -76404181 - AluSx SINE Alu -11 301 1 757 98 0 0 chr2 176852528 176852645 -76403938 + AluSc SINE Alu 187 303 0 2276 82 23 3 chr2 176852708 176853011 -76403572 + AluY SINE Alu 1 309 -2 186 103 0 0 chr2 176853948 176853977 -76402606 + (TA)n Simple_repeat Simple_repeat 2 30 0 269 283 172 11 chr2 176854339 176854533 -76402050 - MIR SINE MIR -1 261 38 194 200 91 36 chr2 176854807 176854862 -76401721 + MIR SINE MIR 51 108 -154 549 241 94 0 chr2 176855526 176855729 -76400854 - MER5C DNA MER1_type -67 257 36 10361 40 17 98 chr2 176855944 176857452 -76399131 - SVA Other Other 0 1386 1 1885 157 0 7 chr2 176857539 176857844 -76398739 - AluJb SINE Alu -9 303 1 2038 145 0 0 chr2 176858225 176858522 -76398061 - AluSx SINE Alu -15 297 1 189 107 0 0 chr2 176858616 176858644 -76397939 + (A)n Simple_repeat Simple_repeat 1 28 0 2195 116 0 10 chr2 176859231 176859533 -76397050 + AluSg SINE Alu 1 299 -11 2159 104 0 36 chr2 176859635 176859943 -76396640 + AluSx SINE Alu 1 297 -15 1149 117 22 72 chr2 176860679 176860902 -76395681 - L1MB8 LINE L1 0 6178 5967 564 224 82 14 chr2 176861054 176861201 -76395382 - MER90 LTR ERV1 -1 613 457 1272 185 5 0 chr2 176861201 176861406 -76395177 + AluSx SINE Alu 1 206 -106 2543 76 0 0 chr2 176861519 176861821 -76394762 - AluY SINE Alu -9 302 1 523 198 47 0 chr2 176861821 176861927 -76394656 - MER90 LTR ERV1 -348 227 117 445 287 25 32 chr2 176862196 176862353 -76394230 - MLT1J2 LTR MaLR -12 438 283 2186 104 0 0 chr2 176862483 176862819 -76393764 - AluSg SINE Alu 0 336 1 229 86 114 0 chr2 176862844 176862879 -76393704 + MLT1F LTR MaLR 463 501 -41 864 189 0 0 chr2 176863061 176863193 -76393390 + FLAM_A SINE Alu 2 133 0 370 151 54 15 chr2 176863256 176863332 -76393251 - MLT1G1 LTR MaLR 0 595 480 245 261 0 0 chr2 176863334 176863399 -76393184 + L1MC4 LINE L1 6636 6700 -1342 223 218 18 0 chr2 176863400 176863455 -76393128 + (TA)n Simple_repeat Simple_repeat 1 56 0 5884 101 10 1 chr2 176863524 176864336 -76392247 - L1PA13 LINE L1 -2 6161 5343 1164 69 0 7 chr2 176864337 176864481 -76392102 + AluSp SINE Alu 1 143 -170 22 0 0 0 chr2 176864942 176864964 -76391619 + AT_rich Low_complexity Low_complexity 1 22 0 253 306 148 28 chr2 176864978 176865086 -76391497 + MIR SINE MIR 21 141 -67 2446 63 7 0 chr2 176866381 176866680 -76389903 - AluY SINE Alu -10 301 1 189 186 0 93 chr2 176867477 176867520 -76389063 + MIR SINE MIR 106 144 -64 2115 126 3 0 chr2 176868046 176868348 -76388235 - AluSx SINE Alu -3 309 7 2177 122 0 0 chr2 176868365 176868659 -76387924 - AluSg SINE Alu -14 296 3 21 36 0 0 chr2 176868957 176868985 -76387598 + AT_rich Low_complexity Low_complexity 1 28 0 2365 66 0 35 chr2 176868995 176869312 -76387271 + AluSp SINE Alu 1 306 -7 2320 80 13 0 chr2 176869803 176870105 -76386478 + AluSp SINE Alu 1 306 -7 2231 89 3 49 chr2 176870950 176871275 -76385308 + AluSp SINE Alu 3 312 -1 2300 69 0 10 chr2 176871482 176871785 -76384798 + AluY SINE Alu 1 300 -11 1068 161 65 15 chr2 176871943 176872142 -76384441 + AluJo SINE Alu 86 294 -18 1297 158 14 9 chr2 176873045 176873266 -76383317 - AluJo SINE Alu -8 304 83 2582 62 0 0 chr2 176873417 176873726 -76382857 - AluY SINE Alu -2 309 1 785 160 0 16 chr2 176873730 176873855 -76382728 - FLAM_C SINE Alu -13 130 8 1853 120 0 4 chr2 176874297 176874583 -76382000 - AluSq SINE Alu 0 320 36 2348 62 16 33 chr2 176874773 176875077 -76381506 - AluY SINE Alu -12 299 1 284 313 118 19 chr2 176875181 176875392 -76381191 - L1ME LINE L1 -378 5743 5512 309 292 168 0 chr2 176875479 176875681 -76380902 - L1ME4a LINE L1 -12 6109 5874 2063 119 33 10 chr2 176875740 176876042 -76380541 - AluSx SINE Alu -2 310 2 216 0 0 0 chr2 176876044 176876068 -76380515 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1982 110 33 0 chr2 176876068 176876341 -76380242 - AluSx SINE Alu -30 282 1 3297 116 37 14 chr2 176876395 176876912 -76379671 - L1MA3 LINE L1 0 6305 5777 2437 70 3 3 chr2 176876913 176877225 -76379358 - AluSp SINE Alu -1 312 1 2154 103 7 13 chr2 176877225 176877526 -76379057 - AluSx SINE Alu -13 299 1 2103 129 0 7 chr2 176877828 176878123 -76378460 - AluSx SINE Alu -19 293 1 960 133 13 0 chr2 176878123 176878273 -76378310 - L1MA3 LINE L1 -525 5780 5629 22 35 0 0 chr2 176878276 176878305 -76378278 + AT_rich Low_complexity Low_complexity 1 29 0 772 164 91 209 chr2 176878437 176878608 -76377975 - AluJo SINE Alu -9 293 103 2177 135 3 3 chr2 176878608 176878920 -76377663 - AluSx SINE Alu 0 312 1 772 164 91 209 chr2 176878920 176878973 -76377610 - AluJo SINE Alu -199 103 117 222 37 0 0 chr2 176878973 176879000 -76377583 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 772 164 91 209 chr2 176879000 176879104 -76377479 - AluJo SINE Alu -184 118 3 1693 161 8 0 chr2 176879110 176879371 -76377212 - AluJb SINE Alu -15 297 35 2337 88 0 3 chr2 176879390 176879697 -76376886 - AluY SINE Alu -5 306 1 33 43 0 0 chr2 176879844 176879891 -76376692 + AT_rich Low_complexity Low_complexity 1 47 0 267 239 0 0 chr2 176879906 176880036 -76376547 + (TA)n Simple_repeat Simple_repeat 1 130 0 802 247 26 18 chr2 176880045 176880286 -76376297 - L1ME4a LINE L1 -345 5776 5532 1796 167 10 0 chr2 176881185 176881479 -76375104 - AluJb SINE Alu -15 297 1 1066 180 121 0 chr2 176881513 176881719 -76374864 - MER46A DNA MER2_type -3 233 3 186 143 0 0 chr2 176881764 176881799 -76374784 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 864 283 81 54 chr2 176882398 176882894 -76373689 - L2 LINE L2 0 3313 2796 744 184 69 6 chr2 176882902 176883076 -76373507 + MER33 DNA MER1_type 14 198 -126 289 179 295 0 chr2 176883076 176883154 -76373429 + Tigger4(Zombi) DNA MER2_type 1 101 -2630 1184 126 45 31 chr2 176883165 176883388 -76373195 + Tigger4(Zombi) DNA MER2_type 2506 2731 0 234 169 74 155 chr2 176883388 176883445 -76373138 + Charlie5 DNA MER1_type 2493 2494 -91 2106 88 7 0 chr2 176883445 176883717 -76372866 - AluSg SINE Alu -36 274 1 234 169 74 155 chr2 176883717 176883803 -76372780 + Charlie5 DNA MER1_type 2494 2585 0 898 297 122 22 chr2 176883850 176884220 -76372363 - L2 LINE L2 -570 2744 2338 22 56 0 0 chr2 176884220 176884256 -76372327 + AT_rich Low_complexity Low_complexity 1 36 0 565 206 48 0 chr2 176885444 176885570 -76371013 - FLAM_C SINE Alu 0 133 2 2166 106 3 7 chr2 176885699 176886000 -76370583 + AluSg SINE Alu 1 300 -10 1936 124 0 24 chr2 176886021 176886157 -76370426 + AluSx SINE Alu 1 139 -173 2174 119 7 0 chr2 176886157 176886459 -76370124 + AluSq SINE Alu 1 304 -9 1936 124 0 24 chr2 176886459 176886620 -76369963 + AluSx SINE Alu 139 291 -21 2058 118 10 3 chr2 176886624 176886913 -76369670 + AluSx SINE Alu 1 291 -21 23 33 0 0 chr2 176886988 176887018 -76369565 + AT_rich Low_complexity Low_complexity 1 30 0 219 235 59 0 chr2 176887291 176887342 -76369241 - L3 LINE CR1 -6 1571 1518 2274 110 0 0 chr2 176887417 176887717 -76368866 + AluSg SINE Alu 1 300 -10 22 0 0 0 chr2 176887973 176887995 -76368588 + AT_rich Low_complexity Low_complexity 1 22 0 891 218 12 0 chr2 176888970 176889135 -76367448 - FAM SINE Alu -8 167 1 2363 65 3 3 chr2 176889314 176889604 -76366979 + AluY SINE Alu 1 290 -21 2388 54 10 7 chr2 176889906 176890204 -76366379 + AluY SINE Alu 1 299 -12 1338 140 14 14 chr2 176890313 176890534 -76366049 - AluJb SINE Alu -11 301 81 1554 194 77 5 chr2 176890633 176891009 -76365574 + L1MC4 LINE L1 6918 7320 -722 465 169 0 0 chr2 176891010 176891087 -76365496 - MER82 DNA MER2_type 0 653 577 1996 226 105 32 chr2 176891234 176891977 -76364606 - L1MC4a LINE L1 -1252 6556 5760 1850 116 67 11 chr2 176892025 176892309 -76364274 + AluSx SINE Alu 1 300 -12 281 287 182 25 chr2 176892486 176892772 -76363811 - L1ME LINE L1 -294 5827 5497 305 64 0 76 chr2 176893005 176893063 -76363520 - L1MB4 LINE L1 -23 6157 6093 189 0 0 0 chr2 176893069 176893090 -76363493 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 920 176 0 0 chr2 176893090 176893232 -76363351 - FRAM SINE Alu -30 146 5 2413 178 118 20 chr2 176893243 176893476 -76363107 - L1MB4 LINE L1 -79 6101 5892 2444 73 3 0 chr2 176893476 176893777 -76362806 - AluY SINE Alu -8 303 2 2413 178 118 20 chr2 176893777 176894095 -76362488 - L1MB4 LINE L1 -288 5892 5496 438 259 15 67 chr2 176894100 176894235 -76362348 + MER82 DNA MER2_type 525 652 -1 22 35 0 0 chr2 176894517 176894546 -76362037 + AT_rich Low_complexity Low_complexity 1 29 0 1834 152 16 3 chr2 176894747 176895050 -76361533 + AluJo SINE Alu 4 310 -2 23 0 0 0 chr2 176895591 176895614 -76360969 + AT_rich Low_complexity Low_complexity 1 23 0 5087 114 10 14 chr2 176895956 176895968 -76360615 - L1PA7 LINE L1 0 6154 6143 3419 148 49 24 chr2 176895968 176896133 -76360450 - L1MA8 LINE L1 -3 6288 6129 2303 113 0 0 chr2 176896133 176896443 -76360140 - AluSg SINE Alu 0 310 1 3419 148 49 24 chr2 176896443 176896954 -76359629 - L1MA8 LINE L1 -162 6129 5595 5087 114 10 14 chr2 176896954 176897773 -76358810 - L1PA7 LINE L1 -11 6143 5327 939 146 224 0 chr2 176898322 176898514 -76358069 - MER46A DNA MER2_type -1 235 1 242 286 68 31 chr2 176898683 176898844 -76357739 - L1M4 LINE L1 -3052 3094 2928 1235 207 50 18 chr2 176898877 176899157 -76357426 - AluJo SINE Alu -20 292 4 1167 154 27 0 chr2 176899324 176899512 -76357071 - AluSg/x SINE Alu 0 310 118 1966 135 72 21 chr2 176900331 176900717 -76355866 + L1MA4A LINE L1 5887 6292 -11 892 141 0 0 chr2 176901868 176901996 -76354587 - FLAM_C SINE Alu -5 128 1 239 185 0 37 chr2 176902096 176902150 -76354433 + MLT1K LTR MaLR 489 540 -48 25 0 0 0 chr2 176902279 176902304 -76354279 + AT_rich Low_complexity Low_complexity 1 25 0 1923 123 10 33 chr2 176902404 176902706 -76353877 + AluSx SINE Alu 3 297 -15 25 31 0 0 chr2 176902974 176903006 -76353577 + AT_rich Low_complexity Low_complexity 1 32 0 312 307 124 0 chr2 176903125 176903278 -76353305 - MER117 DNA MER1_type 0 197 26 786 237 172 40 chr2 176903387 176903759 -76352824 - LTR52 LTR ERVL 0 421 1 1484 138 13 107 chr2 176903794 176903998 -76352585 - AluJo SINE Alu -24 288 123 2390 155 84 2 chr2 176903998 176904412 -76352171 - MER83 LTR ERV1 0 448 1 1484 138 13 107 chr2 176904412 176904525 -76352058 - AluJo SINE Alu -189 123 1 19846 84 10 16 chr2 176904681 176907560 -76349023 - L1P LINE L1 -915 5231 2370 2994 137 24 7 chr2 176907543 176908281 -76348302 - L1M2 LINE L1 -681 5610 4862 * 213 247 206 14 chr2 176908879 176908952 -76347631 - MIR SINE MIR -74 188 102 22 0 0 0 chr2 176909194 176909216 -76347367 + AT_rich Low_complexity Low_complexity 1 22 0 24 53 0 0 chr2 176909457 176909495 -76347088 + AT_rich Low_complexity Low_complexity 1 38 0 26 0 0 0 chr2 176909643 176909669 -76346914 + AT_rich Low_complexity Low_complexity 1 26 0 1184 165 165 31 chr2 176909721 176909976 -76346607 + AluJo SINE Alu 1 289 -23 1005 84 15 0 chr2 176910052 176910183 -76346400 + AluSq/x SINE Alu 1 133 -179 745 88 97 0 chr2 176911245 176911358 -76345225 + MER85 DNA T2_type 1 124 -15 1754 170 14 0 chr2 176911884 176912167 -76344416 - AluJo SINE Alu -13 299 13 2372 73 0 10 chr2 176912501 176912803 -76343780 - AluY SINE Alu -12 299 1 24 32 0 0 chr2 176912854 176912885 -76343698 + AT_rich Low_complexity Low_complexity 1 31 0 1327 130 29 12 chr2 176912891 176913137 -76343446 - L1MA7 LINE L1 -21 6270 6021 528 233 126 47 chr2 176913271 176913710 -76342873 - L1MDa LINE L1 -2156 5932 1753 1686 156 0 8 chr2 176913714 176913971 -76342612 - MER1B DNA MER1_type -66 273 19 2081 110 14 0 chr2 176914305 176914595 -76341988 - AluSx SINE Alu -10 302 9 1975 134 0 11 chr2 176914643 176914926 -76341657 - AluSx SINE Alu -32 280 1 1911 146 7 0 chr2 176915027 176915308 -76341275 - AluSx SINE Alu -27 285 3 885 198 0 0 chr2 176915439 176915601 -76340982 - AluJb SINE Alu -11 301 140 189 0 0 0 chr2 176915618 176915639 -76340944 + (T)n Simple_repeat Simple_repeat 1 21 0 648 198 0 24 chr2 176916442 176916568 -76340015 + FLAM_A SINE Alu 3 125 -8 1808 160 23 20 chr2 176916576 176916882 -76339701 + AluJb SINE Alu 6 312 0 720 217 141 52 chr2 176917068 176917551 -76339032 - L1MC5 LINE L1 -61 7900 7375 567 211 109 17 chr2 176917629 176917804 -76338779 - L1MC5 LINE L1 -735 7226 7036 202 214 24 0 chr2 176919801 176919843 -76336740 + GA-rich Low_complexity Low_complexity 1 43 0 2309 59 3 14 chr2 176920371 176920678 -76335905 + AluY SINE Alu 1 304 0 261 236 45 34 chr2 176920985 176921074 -76335509 + L2 LINE L2 3159 3248 -65 14572 109 12 9 chr2 176921089 176921609 -76334974 - Tigger1 DNA MER2_type -305 2113 1596 2461 78 7 0 chr2 176921609 176921917 -76334666 - AluSq SINE Alu -3 310 1 14572 109 12 9 chr2 176921917 176923501 -76333082 - Tigger1 DNA MER2_type -822 1596 2 958 310 116 28 chr2 176923634 176924173 -76332410 - L2 LINE L2 -272 3000 2415 711 65 0 0 chr2 176924179 176924272 -76332311 + AluY SINE Alu 208 300 -11 553 265 112 6 chr2 176924288 176924458 -76332125 - L2 LINE L2 -945 2369 2182 1457 228 58 6 chr2 176924919 176925427 -76331156 - MLT1F1 LTR MaLR 0 567 1 780 309 72 72 chr2 176925582 176925956 -76330627 + L2 LINE L2 2791 3164 -108 2103 123 0 7 chr2 176925956 176926249 -76330334 - AluSq SINE Alu -22 291 1 780 309 72 72 chr2 176926249 176926357 -76330226 + L2 LINE L2 3164 3271 -1 2110 202 21 66 chr2 176926795 176927373 -76329210 - MLT2B3 LTR ERVL -2 552 1 667 212 176 0 chr2 176928181 176928351 -76328232 + L1ME1 LINE L1 5961 6160 -6 315 259 28 84 chr2 176928725 176928868 -76327715 + MLT1H LTR MaLR 399 533 -16 250 260 110 0 chr2 176928896 176928996 -76327587 + L1ME4a LINE L1 6009 6119 -2 25 51 0 0 chr2 176929611 176929650 -76326933 + AT_rich Low_complexity Low_complexity 1 39 0 2943 117 7 2 chr2 176929758 176930184 -76326399 - MSTA LTR MaLR 0 428 1 396 326 78 17 chr2 176930387 176930798 -76325785 - L1M4 LINE L1 -1016 5130 4695 669 191 30 0 chr2 176930976 176931107 -76325476 - L1ME1 LINE L1 -112 6054 5920 5010 224 40 43 chr2 176931714 176932537 -76324046 + L1ME1 LINE L1 3652 4476 -1690 2438 83 3 3 chr2 176932537 176932850 -76323733 + AluSp SINE Alu 1 313 0 5010 224 40 43 chr2 176932850 176933021 -76323562 + L1ME1 LINE L1 4476 4646 -1520 2319 107 0 0 chr2 176933021 176933329 -76323254 + AluSx SINE Alu 1 308 -4 5010 224 40 43 chr2 176933329 176933700 -76322883 + L1ME1 LINE L1 4646 5017 -1149 1341 128 57 64 chr2 176933700 176933876 -76322707 - L1PA15 LINE L1 -4 6161 5986 2265 95 3 10 chr2 176933876 176934182 -76322401 + AluY SINE Alu 1 304 -7 1341 128 57 64 chr2 176934182 176934270 -76322313 - L1PA15 LINE L1 -179 5986 5899 5010 224 40 43 chr2 176934270 176935131 -76321452 + L1ME1 LINE L1 5017 5878 -288 575 238 24 22 chr2 176935137 176935362 -76321221 + L1MA10 LINE L1 5953 6331 -3 521 335 0 18 chr2 176935867 176936031 -76320552 + MIR SINE MIR 20 180 -82 335 281 94 6 chr2 176936432 176936603 -76319980 + MLT1L LTR MaLR 430 615 0 1145 298 35 69 chr2 176936650 176937218 -76319365 - LTR67 LTR ERVL -3 554 6 646 299 170 9 chr2 176937218 176937442 -76319141 + MIR SINE MIR 3 262 0 4460 171 38 33 chr2 176938788 176939127 -76317456 - L1MB7 LINE L1 -16 6666 6330 225 0 0 0 chr2 176939127 176939152 -76317431 + (TTG)n Simple_repeat Simple_repeat 1 25 0 1852 140 4 11 chr2 176939156 176939434 -76317149 - AluSx SINE Alu -36 276 1 4460 171 38 33 chr2 176939434 176940486 -76316097 - L1MB7 LINE L1 -354 6328 5265 886 222 0 6 chr2 176940486 176940662 -76315921 - FAM SINE Alu 0 175 1 4460 171 38 33 chr2 176940662 176940881 -76315702 - L1MB7 LINE L1 -1417 5265 5049 2645 129 24 12 chr2 176940881 176941300 -76315283 - MSTC LTR MaLR 0 428 5 2571 97 8 0 chr2 176941460 176941812 -76314771 - THE1A LTR MaLR 0 355 1 11430 82 5 69 chr2 176941812 176943501 -76313082 - THE1A-int LTR MaLR 0 1580 1 2638 86 14 0 chr2 176943501 176943851 -76312732 - THE1A LTR MaLR 0 355 1 2652 186 83 31 chr2 176943853 176944591 -76311992 - L1MB7 LINE L1 -1632 5012 4237 951 155 47 0 chr2 176944606 176944754 -76311829 - FAM SINE Alu -20 165 11 1065 213 44 4 chr2 176944766 176945015 -76311568 - L1MB7 LINE L1 -2393 4251 3993 1945 90 0 0 chr2 176945034 176945279 -76311304 + AluSq SINE Alu 58 302 -11 2262 213 29 55 chr2 176945290 176946022 -76310561 - L1MB7 LINE L1 -4784 1862 1150 2713 190 65 20 chr2 176946233 176946844 -76309739 - L1MB7 LINE L1 -5402 1140 502 1454 165 71 85 chr2 176946844 176947037 -76309546 - MSTD LTR MaLR -7 389 202 362 21 21 0 chr2 176947037 176947084 -76309499 + (CA)n Simple_repeat Simple_repeat 1 48 0 1454 165 71 85 chr2 176947084 176947254 -76309329 - MSTD LTR MaLR -194 202 31 1580 264 80 23 chr2 176947254 176947731 -76308852 - L1MB7 LINE L1 -6038 504 1 317 285 80 131 chr2 176949060 176949411 -76307172 - L1M2 LINE L1 -5723 1126 794 21 0 0 0 chr2 176950276 176950297 -76306286 + AT_rich Low_complexity Low_complexity 1 21 0 193 333 73 27 chr2 176950369 176950519 -76306064 + L2 LINE L2 1771 1927 -1387 304 335 234 13 chr2 176950519 176950580 -76306003 + L2 LINE L2 2033 2079 -1235 1760 107 12 8 chr2 176950580 176950824 -76305759 - AluSx SINE Alu -18 294 50 1866 155 7 4 chr2 176950824 176951101 -76305482 - AluJb SINE Alu -29 283 5 304 335 234 13 chr2 176951101 176951414 -76305169 + L2 LINE L2 2078 2491 -823 640 183 15 7 chr2 176951579 176951716 -76304867 - Charlie1 DNA MER1_type -5 2756 2619 582 224 66 0 chr2 176951710 176951862 -76304721 - Charlie1 DNA MER1_type -2535 226 65 * 382 374 86 40 chr2 176951909 176952187 -76304396 + L2 LINE L2 2671 2961 -353 220 321 30 52 chr2 176952233 176952367 -76304216 + L2 LINE L2 3164 3294 -19 21 0 0 0 chr2 176952701 176952722 -76303861 + AT_rich Low_complexity Low_complexity 1 21 0 497 183 29 29 chr2 176959411 176959515 -76297068 - MER119 DNA MER1_type 0 583 480 923 164 13 0 chr2 176959522 176959674 -76296909 + FRAM SINE Alu 13 166 -10 1051 217 199 15 chr2 176959721 176960048 -76296535 - MER119 DNA MER1_type -192 391 5 608 263 59 60 chr2 176960390 176960686 -76295897 + L1MC5 LINE L1 5586 5809 -355 3984 142 129 6 chr2 176960734 176961621 -76294962 + L1MB2 LINE L1 5172 6171 0 838 192 24 0 chr2 176961663 176961830 -76294753 - L1MB5 LINE L1 -56 6118 5948 1449 177 115 12 chr2 176962057 176962411 -76294172 + L1MB5 LINE L1 5783 6174 0 21 36 0 0 chr2 176963685 176963713 -76292870 + AT_rich Low_complexity Low_complexity 1 28 0 329 271 70 8 chr2 176964232 176964361 -76292222 + L1MC5 LINE L1 6978 7114 -847 1143 217 39 68 chr2 176964452 176964618 -76291965 + L1ME LINE L1 5152 5321 -845 2203 85 13 29 chr2 176964618 176964934 -76291649 + AluSq SINE Alu 1 311 -2 1410 170 57 3 chr2 176964938 176965221 -76291362 + L1MB4 LINE L1 5882 6179 -1 1143 217 39 68 chr2 176965221 176965512 -76291071 + L1ME LINE L1 5324 5578 -588 2073 82 36 14 chr2 176966399 176966679 -76289904 + AluSp SINE Alu 11 296 -17 333 0 0 0 chr2 176967478 176967515 -76289068 + (TG)n Simple_repeat Simple_repeat 2 38 0 1742 140 44 20 chr2 176967560 176967690 -76288893 + AluJo SINE Alu 1 126 -186 2395 84 0 0 chr2 176967690 176967988 -76288595 + AluSg SINE Alu 1 298 -12 1742 140 44 20 chr2 176967988 176968150 -76288433 + AluJo SINE Alu 126 300 -12 1609 97 169 0 chr2 176968150 176968398 -76288185 - AluSx SINE Alu -12 290 1 642 152 0 0 chr2 176968619 176968718 -76287865 - FLAM_C SINE Alu -7 136 38 761 222 73 129 chr2 176969121 176969199 -76287384 - L2 LINE L2 -20 3293 3212 894 229 0 0 chr2 176969199 176969365 -76287218 + FAM SINE Alu 1 166 -9 761 222 73 129 chr2 176969365 176969457 -76287126 - L2 LINE L2 -101 3212 3116 2594 32 0 16 chr2 176969457 176969767 -76286816 + AluY SINE Alu 1 305 -6 531 82 0 0 chr2 176969773 176969846 -76286737 + (TA)n Simple_repeat Simple_repeat 1 73 0 761 222 73 129 chr2 176969846 176970229 -76286354 - L2 LINE L2 -202 3111 2711 468 307 173 37 chr2 176970231 176970694 -76285889 + L2 LINE L2 1835 2360 -954 618 276 0 16 chr2 176971016 176971201 -76285382 + L1ME LINE L1 5581 5762 -359 345 212 72 10 chr2 176971347 176971460 -76285123 + L1ME4a LINE L1 1190 6071 -38 22 0 0 0 chr2 176971523 176971545 -76285038 + AT_rich Low_complexity Low_complexity 1 22 0 689 180 65 0 chr2 176971901 176972040 -76284543 - FRAM SINE Alu -18 148 1 304 221 15 29 chr2 176972406 176972474 -76284109 - MIR SINE MIR -111 97 31 377 300 82 6 chr2 176972476 176972646 -76283937 + HAL1 LINE L1 979 1161 -1346 336 327 63 0 chr2 176972671 176972830 -76283753 + MLT1J LTR MaLR 46 214 -297 1220 162 9 14 chr2 176972830 176973040 -76283543 + AluJb SINE Alu 81 289 -23 696 178 0 22 chr2 176973040 176973273 -76283310 + GA-rich Low_complexity Low_complexity 1 227 0 329 268 49 0 chr2 176973297 176973379 -76283204 + MLT1J LTR MaLR 224 309 -202 1357 102 0 6 chr2 176973427 176973604 -76282979 + AluSq SINE Alu 3 178 -135 1606 195 27 3 chr2 176974545 176974842 -76281741 + AluJb SINE Alu 1 304 -8 2154 138 91 15 chr2 176974980 176975378 -76281205 - MSTA LTR MaLR 0 428 1 723 73 9 27 chr2 176975378 176975488 -76281095 - MSTA-int LTR MaLR 0 1580 1473 * 1735 166 42 71 chr2 176975487 176975808 -76280775 - L1 LINE L1 -2630 3516 3187 2231 115 0 10 chr2 176975808 176976104 -76280479 + AluSg SINE Alu 1 293 -17 1735 166 42 71 chr2 176976104 176976121 -76280462 - L1 LINE L1 -2959 3187 3171 192 40 0 0 chr2 176976121 176976146 -76280437 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 1735 166 42 71 chr2 176976146 176976282 -76280301 - L1 LINE L1 -2975 3171 3055 22 0 0 0 chr2 176976284 176976306 -76280277 + AT_rich Low_complexity Low_complexity 1 22 0 2045 131 7 3 chr2 176976306 176976604 -76279979 - AluJb SINE Alu -13 299 1 2485 37 0 7 chr2 176977111 176977407 -76279176 + AluY SINE Alu 1 294 -17 1015 201 216 33 chr2 176977410 176977799 -76278784 - LTR40b LTR ERVL -2 460 1 2313 65 14 0 chr2 176978777 176979067 -76277516 - AluY SINE Alu -17 294 1 609 286 138 9 chr2 176980118 176980349 -76276234 + MIR SINE MIR 1 261 -1 6343 79 13 21 chr2 176980755 176981667 -76274916 - L1PA11 LINE L1 0 6174 5270 2445 129 7 2 chr2 176981821 176982224 -76274359 - L1PA11 LINE L1 -869 5277 4873 1076 237 16 83 chr2 176983470 176983925 -76272658 - MLT1J LTR MaLR 0 511 3 1352 184 32 11 chr2 176984002 176984284 -76272299 - AluJb SINE Alu -24 288 1 21 0 0 0 chr2 176984727 176984748 -76271835 + AT_rich Low_complexity Low_complexity 1 21 0 400 297 33 24 chr2 176984873 176985030 -76271553 - MLT1E LTR MaLR -150 504 313 795 168 0 8 chr2 176985052 176985183 -76271400 + FLAM_C SINE Alu 2 131 -12 853 138 8 0 chr2 176985288 176985418 -76271165 + FLAM_C SINE Alu 1 131 -2 21 0 0 0 chr2 176985423 176985444 -76271139 + AT_rich Low_complexity Low_complexity 1 21 0 621 274 100 61 chr2 176985746 176985843 -76270740 + L1MEd LINE L1 848 940 -5476 2131 220 119 19 chr2 176985843 176986380 -76270203 + MLT1E LTR MaLR 1 591 -2 621 274 100 61 chr2 176986380 176986594 -76269989 + L1MEd LINE L1 940 1144 -5272 1204 140 89 16 chr2 176986594 176986851 -76269732 + L1MA5A LINE L1 6021 6296 -1 621 274 100 61 chr2 176986851 176987117 -76269466 + L1MEd LINE L1 1144 1478 -4938 2215 88 0 16 chr2 176987117 176987422 -76269161 + AluY SINE Alu 1 300 -11 621 274 100 61 chr2 176987422 176987457 -76269126 + L1MEd LINE L1 1478 1510 -4906 344 227 136 9 chr2 176987493 176987718 -76268865 + L1MEd LINE L1 1345 1690 -4736 773 231 59 29 chr2 176987721 176987869 -76268714 - L1M4 LINE L1 -2576 3570 3428 2101 181 35 123 chr2 176987869 176988307 -76268276 - MLT1F1 LTR MaLR 0 567 92 1927 118 33 7 chr2 176988307 176988612 -76267971 + AluSq SINE Alu 1 313 0 2101 181 35 123 chr2 176988612 176988651 -76267932 - MLT1F1 LTR MaLR -475 92 51 2101 54 57 4 chr2 176988651 176988930 -76267653 + AluY SINE Alu 1 294 -17 2101 181 35 123 chr2 176988930 176989070 -76267513 - MLT1F1 LTR MaLR -516 51 3 773 231 59 29 chr2 176989070 176989159 -76267424 - L1M4 LINE L1 -2718 3428 3326 1426 277 19 33 chr2 176989364 176989844 -76266739 - L1MEc LINE L1 -5867 529 57 308 278 168 37 chr2 176989879 176990046 -76266537 + MIR SINE MIR 3 199 -63 1553 201 169 34 chr2 176990046 176990490 -76266093 - MLT1D LTR MaLR 0 505 2 308 278 168 37 chr2 176990490 176990513 -76266070 + MIR SINE MIR 199 218 -44 1508 160 80 14 chr2 176991196 176991362 -76265221 - AluJo SINE Alu -6 306 112 225 0 0 0 chr2 176991362 176991387 -76265196 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 1508 160 80 14 chr2 176991387 176991507 -76265076 - AluJo SINE Alu -200 112 1 1939 208 139 13 chr2 176991595 176992147 -76264436 + MLT1E3 LTR MaLR 1 622 -2 34 55 0 0 chr2 176992357 176992412 -76264171 + AT_rich Low_complexity Low_complexity 1 55 0 894 189 23 23 chr2 176992468 176992643 -76263940 - MER45A DNA AcHobo 0 178 4 258 292 110 14 chr2 176992746 176992955 -76263628 - L1ME4a LINE L1 -76 6045 5817 519 266 39 44 chr2 176993031 176993216 -76263367 + MIR3 SINE MIR 18 202 -6 863 182 18 38 chr2 176993376 176993848 -76262735 - LTR18B LTR ERVL 0 614 1 10934 147 11 13 chr2 176994001 176995657 -76260926 - HERVL18 LTR ERVL 0 6047 4394 4491 167 45 71 chr2 176995659 176996544 -76260039 - HERVL18 LTR ERVL -2468 3579 2718 * 13549 170 26 28 chr2 176996541 176998935 -76257648 - HERVL18 LTR ERVL -3595 2452 2 672 200 0 22 chr2 176998945 176999080 -76257503 - LTR18B LTR ERVL -6 608 477 859 169 22 64 chr2 176999083 176999341 -76257242 - LTR18B LTR ERVL -320 294 1 1602 135 0 4 chr2 176999431 176999675 -76256908 - AluSp SINE Alu -70 243 1 430 232 32 0 chr2 176999895 176999990 -76256593 - MER5A DNA MER1_type -83 106 9 768 186 19 19 chr2 177000089 177000245 -76256338 - LTR32 LTR ERVL 0 471 316 * 1917 125 31 68 chr2 177000244 177000390 -76256193 - LTR32 LTR ERVL -119 352 202 2511 52 0 3 chr2 177000390 177000699 -76255884 + AluY SINE Alu 1 308 -3 1917 125 31 68 chr2 177000699 177000903 -76255680 - LTR32 LTR ERVL -269 202 15 922 197 4 82 chr2 177001307 177001540 -76255043 - MER20 DNA MER1_type 0 219 5 2357 87 0 0 chr2 177001868 177002167 -76254416 - AluSx SINE Alu -13 299 1 216 0 0 0 chr2 177002481 177002505 -76254078 + (T)n Simple_repeat Simple_repeat 1 24 0 932 201 0 6 chr2 177002689 177002868 -76253715 - AluJb SINE Alu -22 290 113 299 140 60 0 chr2 177003276 177003326 -76253257 + MLT1A1 LTR MaLR 1 53 -312 1071 258 10 0 chr2 177003359 177003680 -76252903 + AluY SINE Alu 1 324 0 1372 206 9 9 chr2 177004186 177004502 -76252081 + MER33 DNA MER1_type 9 324 0 333 239 74 33 chr2 177004514 177004765 -76251818 + Charlie7 DNA MER1_type 5 2597 -15 514 248 8 31 chr2 177006051 177006180 -76250403 - MER67C LTR ERV1 -301 409 284 1649 209 67 14 chr2 177006181 177006539 -76250044 - MSTA LTR MaLR 0 428 52 1105 56 0 7 chr2 177006724 177006892 -76249691 + AluY SINE Alu 138 304 0 1032 169 11 11 chr2 177006893 177007070 -76249513 - MSTB LTR MaLR -249 177 1 835 131 46 0 chr2 177007072 177007202 -76249381 - MLT1A1 LTR MaLR -229 136 1 571 246 123 40 chr2 177007254 177007506 -76249077 + MLT1J LTR MaLR 239 511 0 1785 113 84 35 chr2 177007576 177007887 -76248696 + MER4B LTR ERV1 9 334 -276 294 295 118 8 chr2 177007999 177008236 -76248347 + L1ME LINE L1 5548 5810 -311 202 342 13 26 chr2 177008571 177008647 -76247936 - MIR SINE MIR -187 75 1 695 86 0 0 chr2 177011391 177011484 -76245099 - AluY SINE Alu -217 94 2 322 247 11 45 chr2 177012494 177012583 -76244000 - MIR3 SINE MIR -13 195 110 1169 183 0 48 chr2 177012901 177013131 -76243452 - AluJo SINE Alu -92 220 2 1323 132 5 0 chr2 177013140 177013352 -76243231 - AluSq SINE Alu -10 303 91 1956 191 66 34 chr2 177013355 177013577 -76243006 - L1M4 LINE L1 -1009 5137 4924 1803 144 16 23 chr2 177013577 177013883 -76242700 - AluJb SINE Alu -8 304 1 1956 191 66 34 chr2 177013883 177014162 -76242421 - L1M4 LINE L1 -1222 4924 4620 317 195 61 12 chr2 177014182 177014264 -76242319 - L1ME4a LINE L1 -52 6069 5984 306 287 21 0 chr2 177014380 177014474 -76242109 - MER5A DNA MER1_type -51 138 43 353 259 187 22 chr2 177014878 177015017 -76241566 + MIR SINE MIR 84 245 -17 201 245 19 19 chr2 177014985 177015038 -76241545 + L2 LINE L2 3219 3271 -1 * 195 162 0 0 chr2 177015057 177015094 -76241489 + (TGGA)n Simple_repeat Simple_repeat 4 40 0 294 300 171 35 chr2 177015507 177015764 -76240819 - L2 LINE L2 -86 3186 2895 488 228 14 62 chr2 177016106 177016220 -76240363 + MLT1A1 LTR MaLR 186 293 -72 2448 52 3 0 chr2 177016220 177016528 -76240055 - AluY SINE Alu -2 309 1 488 228 14 62 chr2 177016528 177016558 -76240025 + MLT1A1 LTR MaLR 293 323 -42 539 103 23 0 chr2 177016575 177016662 -76239921 + (TCCCC)n Simple_repeat Simple_repeat 4 92 0 2134 96 0 7 chr2 177016662 177016954 -76239629 - AluSx SINE Alu -22 290 1 254 81 27 0 chr2 177017158 177017195 -76239388 - L2 LINE L2 -5 3308 3271 1470 118 41 0 chr2 177017477 177017698 -76238885 - MER30 DNA MER1_type 0 230 1 1986 110 38 0 chr2 177017975 177018267 -76238316 + AluSq SINE Alu 1 303 -10 204 340 9 19 chr2 177018337 177018443 -76238140 - L2 LINE L2 -666 2648 2544 1978 102 0 11 chr2 177018631 177018939 -76237644 - AluSc SINE Alu 0 305 1 618 278 110 50 chr2 177018940 177019146 -76237437 - L2 LINE L2 -11 3302 3073 2234 111 0 0 chr2 177019146 177019452 -76237131 - AluSx SINE Alu -6 306 1 618 278 110 50 chr2 177019452 177019526 -76237057 - L2 LINE L2 -240 3073 3005 1706 104 0 0 chr2 177019526 177019864 -76236719 + L1M1 LINE L1 5101 5438 -743 1499 192 0 34 chr2 177019866 177020163 -76236420 + AluJb SINE Alu 1 287 -15 4616 88 36 23 chr2 177020169 177020860 -76235723 + L1MA2 LINE L1 5601 6300 -4 2046 131 3 6 chr2 177020867 177021180 -76235403 + AluSx SINE Alu 1 312 0 316 192 0 135 chr2 177021181 177021285 -76235298 - L2 LINE L2 -300 3013 2924 1726 175 0 0 chr2 177021649 177021941 -76234642 - AluJb SINE Alu -20 292 1 2046 231 85 33 chr2 177021955 177022286 -76234297 + L1M4 LINE L1 2874 3186 -2960 1892 135 3 10 chr2 177022286 177022589 -76233994 + AluSx SINE Alu 1 301 -11 2046 231 85 33 chr2 177022589 177022783 -76233800 + L1M4 LINE L1 3186 3368 -2778 2187 92 26 0 chr2 177022783 177023088 -76233495 + AluSq SINE Alu 1 313 0 2046 231 85 33 chr2 177023088 177023504 -76233079 + L1M4 LINE L1 3368 3865 -2281 1114 167 43 119 chr2 177023509 177023904 -76232679 + MLT1A1 LTR MaLR 1 365 0 891 202 0 13 chr2 177023904 177024226 -76232357 + MLT1A1-int LTR MaLR 1 375 -1360 4207 141 24 89 chr2 177024227 177025740 -76230843 - pTR5 LTR ERV1 0 2606 1524 1741 196 102 59 chr2 177025740 177026180 -76230403 + MLT1A1-int LTR MaLR 381 839 -896 2156 98 0 28 chr2 177026355 177026672 -76229911 - AluSx SINE Alu -4 308 1 1373 127 28 0 chr2 177026721 177026934 -76229649 + L1PA10 LINE L1 5940 6158 -10 422 259 145 33 chr2 177026964 177027443 -76229140 - L1MC/D LINE L1 -747 5399 4865 1945 124 62 49 chr2 177027443 177027485 -76229098 - THE1C LTR MaLR 0 375 335 2237 84 3 0 chr2 177027485 177027784 -76228799 + AluSp SINE Alu 4 303 -10 1945 124 62 49 chr2 177027784 177028111 -76228472 - THE1C LTR MaLR -40 335 1 422 259 145 33 chr2 177028111 177028432 -76228151 - L1MC/D LINE L1 -1281 4865 4581 905 161 235 40 chr2 177028575 177028675 -76227908 - MLT1A1 LTR MaLR -2 363 284 549 0 0 0 chr2 177028675 177028736 -76227847 + (TG)n Simple_repeat Simple_repeat 2 62 0 905 161 235 40 chr2 177028736 177028933 -76227650 - MLT1A1 LTR MaLR -81 284 8 3374 199 46 91 chr2 177028945 177029190 -76227393 - MLT1A1-int LTR MaLR -1 1734 1480 4272 148 14 17 chr2 177029190 177029955 -76226628 + L1MA4 LINE L1 5531 6293 -7 3374 199 46 91 chr2 177029955 177030155 -76226428 - MLT1A1-int LTR MaLR -255 1480 1273 3806 101 66 2 chr2 177030155 177030700 -76225883 - LTR19B LTR ERV1 0 580 1 3374 199 46 91 chr2 177030700 177031167 -76225416 - MLT1A1-int LTR MaLR -462 1273 862 2408 59 0 0 chr2 177031346 177031636 -76224947 - AluY SINE Alu -21 290 1 1791 189 24 92 chr2 177031643 177031819 -76224764 - L1MC5 LINE L1 -809 7152 6966 2225 82 0 16 chr2 177031819 177032122 -76224461 - AluSc SINE Alu -11 298 1 1791 189 24 92 chr2 177032122 177032489 -76224094 - L1MC5 LINE L1 -995 6966 6646 692 168 72 8 chr2 177032517 177032642 -76223941 + AluJo SINE Alu 5 137 -175 339 130 0 0 chr2 177032828 177032882 -76223701 + (TC)n Simple_repeat Simple_repeat 1 54 0 369 0 0 0 chr2 177032885 177032926 -76223657 + (CA)n Simple_repeat Simple_repeat 1 41 0 21 0 0 0 chr2 177032984 177033005 -76223578 + AT_rich Low_complexity Low_complexity 1 21 0 1790 150 28 0 chr2 177033016 177033302 -76223281 - AluSx SINE Alu -18 294 1 1852 172 13 0 chr2 177033702 177034004 -76222579 + AluJb SINE Alu 1 306 -6 703 304 61 20 chr2 177037046 177037392 -76219191 - L1MC5 LINE L1 -1961 5847 5488 1738 186 0 34 chr2 177037762 177037898 -76218685 + AluJo SINE Alu 1 140 -172 2418 84 3 0 chr2 177037898 177038194 -76218389 + AluSx SINE Alu 1 297 -15 1738 186 0 34 chr2 177038194 177038380 -76218203 + AluJo SINE Alu 140 312 0 1683 179 17 7 chr2 177038792 177039093 -76217490 + AluJb SINE Alu 1 304 -8 422 229 0 10 chr2 177039303 177039399 -76217184 + L2 LINE L2 2715 2809 -505 2213 117 0 3 chr2 177039550 177039848 -76216735 + AluSx SINE Alu 1 297 -15 817 224 162 26 chr2 177040492 177040795 -76215788 + L1MC4a LINE L1 5624 5967 -1841 22 56 0 0 chr2 177041089 177041125 -76215458 + AT_rich Low_complexity Low_complexity 1 36 0 249 288 95 78 chr2 177041255 177041394 -76215189 - L2 LINE L2 -1 3312 3166 2007 131 7 10 chr2 177041394 177041691 -76214892 + AluSx SINE Alu 1 296 -16 249 288 95 78 chr2 177041691 177041794 -76214789 - L2 LINE L2 -147 3166 3066 329 281 48 42 chr2 177041823 177041990 -76214593 - L2 LINE L2 -4 3309 3142 353 159 55 117 chr2 177042165 177042212 -76214371 + MER69 DNA AcHobo 2388 2436 -90 2087 64 107 4 chr2 177042212 177042492 -76214091 - AluY SINE Alu -2 309 1 353 159 55 117 chr2 177042492 177042589 -76213994 + MER69 DNA AcHobo 2436 2523 -3 2310 104 0 3 chr2 177042619 177042928 -76213655 - AluSc SINE Alu -1 308 1 311 232 260 34 chr2 177042928 177043105 -76213478 - L2 LINE L2 -173 3140 2924 1883 130 8 0 chr2 177044760 177045049 -76211534 - AluSx SINE Alu 0 311 21 2212 99 7 3 chr2 177045173 177045475 -76211108 - AluSc SINE Alu -6 303 1 224 259 45 27 chr2 177045517 177045629 -76210954 + L2 LINE L2 567 680 -2634 360 0 0 0 chr2 177045685 177045725 -76210858 + (T)n Simple_repeat Simple_repeat 1 40 0 326 285 76 114 chr2 177045881 177046330 -76210253 + L2 LINE L2 1213 1644 -1670 1862 150 3 33 chr2 177046372 177046672 -76209911 - AluSx SINE Alu -21 291 1 2055 105 70 0 chr2 177046723 177047009 -76209574 + AluSx SINE Alu 1 306 -6 427 125 9 161 chr2 177047021 177047133 -76209450 + FLAM_C SINE Alu 37 131 -12 502 271 172 0 chr2 177047152 177047344 -76209239 + L2 LINE L2 1730 1954 -1360 1717 217 58 57 chr2 177047983 177048117 -76208466 + L1MC5 LINE L1 6965 7097 -864 1590 145 26 46 chr2 177048117 177048421 -76208162 - AluJb SINE Alu -14 298 1 2301 88 10 19 chr2 177048423 177048731 -76207852 - AluSg SINE Alu -1 309 5 1717 217 58 57 chr2 177048731 177049660 -76206923 + L1MC5 LINE L1 7097 7929 -32 2426 88 0 7 chr2 177049740 177050046 -76206537 + AluSp SINE Alu 1 304 -9 1787 163 0 7 chr2 177050521 177050798 -76205785 + AluJo SINE Alu 6 280 -32 1118 189 124 130 chr2 177050969 177051064 -76205519 - MER69 DNA AcHobo -12 2514 2420 2183 107 27 0 chr2 177051064 177051364 -76205219 + AluSx SINE Alu 1 308 -4 1118 189 124 130 chr2 177051364 177051887 -76204696 - MER69 DNA AcHobo -106 2420 1898 2047 116 14 3 chr2 177051887 177052171 -76204412 + AluSc SINE Alu 1 287 -22 1118 189 124 130 chr2 177052171 177052182 -76204401 - MER69 DNA AcHobo -628 1898 1888 904 219 62 27 chr2 177052198 177052454 -76204129 + L1ME3 LINE L1 5622 5886 -276 873 208 87 0 chr2 177052635 177052866 -76203717 - Charlie2a DNA MER1_type -38 2824 2574 235 250 0 16 chr2 177053060 177053124 -76203459 - Charlie2a DNA MER1_type -298 2564 2502 5463 176 47 11 chr2 177053127 177053739 -76202844 - Tigger6a DNA MER2_type -514 1083 417 2331 106 3 0 chr2 177053739 177054041 -76202542 - AluSq SINE Alu -10 303 1 5463 176 47 11 chr2 177054041 177054461 -76202122 - Tigger6a DNA MER2_type -1180 417 14 1141 211 218 63 chr2 177054503 177054887 -76201696 - Charlie2a DNA MER1_type -361 2501 2178 2175 131 3 0 chr2 177054887 177055192 -76201391 + AluSx SINE Alu 1 306 -6 1141 211 218 63 chr2 177055192 177055387 -76201196 - Charlie2a DNA MER1_type -684 2178 2014 368 304 44 15 chr2 177055387 177055522 -76201061 + MER91C DNA MER1_type 1 139 -1 1141 211 218 63 chr2 177055522 177055542 -76201041 - Charlie2a DNA MER1_type -848 2014 1998 2280 107 0 0 chr2 177055542 177055833 -76200750 - AluSg SINE Alu -19 291 1 1141 211 218 63 chr2 177055833 177055879 -76200704 - Charlie2a DNA MER1_type -864 1998 1754 23 33 0 0 chr2 177056001 177056031 -76200552 + AT_rich Low_complexity Low_complexity 1 30 0 312 293 54 48 chr2 177056872 177057039 -76199544 - MIR SINE MIR -45 217 50 180 206 0 48 chr2 177057146 177057209 -76199374 - MER5A DNA MER1_type -21 168 109 1489 158 46 26 chr2 177057286 177057590 -76198993 - MER89 LTR ERV1 0 559 250 1415 121 78 51 chr2 177057590 177057847 -76198736 + AluJo SINE Alu 34 297 -15 317 302 0 0 chr2 177057847 177057933 -76198650 - MER89 LTR ERV1 -300 259 174 285 146 0 0 chr2 177058573 177058621 -76197962 + (CA)n Simple_repeat Simple_repeat 2 49 0 235 227 27 0 chr2 177059121 177059202 -76197381 + (CGGGG)n Simple_repeat Simple_repeat 1 83 0 22 56 0 0 chr2 177059311 177059347 -76197236 + GC_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr2 177059402 177059431 -76197152 + GC_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr2 177060223 177060246 -76196337 + AT_rich Low_complexity Low_complexity 1 23 0 915 229 22 13 chr2 177062040 177062267 -76194316 + MIR SINE MIR 24 252 -10 2349 95 0 0 chr2 177062598 177062894 -76193689 - AluSx SINE Alu -1 311 16 22 0 0 0 chr2 177062938 177062960 -76193623 + AT_rich Low_complexity Low_complexity 1 22 0 36 23 0 0 chr2 177063234 177063277 -76193306 + AT_rich Low_complexity Low_complexity 1 43 0 720 153 0 9 chr2 177063290 177063401 -76193182 - FLAM_C SINE Alu -32 111 2 269 194 0 15 chr2 177063821 177063888 -76192695 + CT-rich Low_complexity Low_complexity 1 66 0 580 214 6 13 chr2 177063913 177064072 -76192511 + CT-rich Low_complexity Low_complexity 2 159 0 234 289 141 7 chr2 177064494 177064629 -76191954 + L2 LINE L2 2929 3081 -191 3366 116 252 44 chr2 177064706 177065110 -76191473 - Tigger3(Golem) DNA MER2_type 0 3029 2710 1633 169 7 11 chr2 177065110 177065389 -76191194 - AluJo SINE Alu -16 296 19 3366 116 252 44 chr2 177065389 177065447 -76191136 - Tigger3(Golem) DNA MER2_type -319 2710 2665 2534 61 0 0 chr2 177065447 177065741 -76190842 - AluY SINE Alu -17 294 1 3366 116 252 44 chr2 177065741 177065755 -76190828 - Tigger3(Golem) DNA MER2_type -364 2665 2655 239 0 32 0 chr2 177065755 177065786 -76190797 + (TA)n Simple_repeat Simple_repeat 1 32 0 3366 116 252 44 chr2 177065786 177066032 -76190551 - Tigger3(Golem) DNA MER2_type -374 2655 2154 660 175 14 35 chr2 177066021 177066164 -76190419 - Tigger3(Golem) DNA MER2_type -2838 191 52 * 721 249 39 35 chr2 177067310 177067539 -76189044 - MIR SINE MIR -21 241 12 725 254 46 18 chr2 177067851 177068068 -76188515 - MIR SINE MIR -3 259 37 22 0 0 0 chr2 177068206 177068228 -76188355 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 177068375 177068403 -76188180 + AT_rich Low_complexity Low_complexity 1 28 0 627 288 34 34 chr2 177068494 177068727 -76187856 + Charlie8 DNA MER1_type 39 271 -2146 24 53 0 0 chr2 177068969 177069007 -76187576 + AT_rich Low_complexity Low_complexity 1 38 0 2050 129 3 3 chr2 177069556 177069850 -76186733 - AluSg SINE Alu -16 294 1 1625 118 151 15 chr2 177069924 177070196 -76186387 - AluSx SINE Alu -3 309 1 2578 62 0 7 chr2 177070224 177070533 -76186050 + AluY SINE Alu 1 307 -4 224 325 53 9 chr2 177071164 177071278 -76185305 + MIR3 SINE MIR 60 178 -30 182 270 124 22 chr2 177071479 177071568 -76185015 - L2 LINE L2 0 3272 3175 1729 114 72 88 chr2 177072095 177072402 -76184181 + AluSx SINE Alu 1 302 -10 889 147 0 0 chr2 177072458 177072587 -76183996 - FLAM_A SINE Alu -6 136 8 518 280 131 33 chr2 177072709 177072846 -76183737 - L2 LINE L2 0 3313 3191 1823 164 3 7 chr2 177072846 177073138 -76183445 + AluJo SINE Alu 13 303 -9 518 280 131 33 chr2 177073138 177073336 -76183247 - L2 LINE L2 -122 3191 2945 432 218 232 0 chr2 177073508 177073650 -76182933 - MER96 DNA MER1_type 0 175 1 246 229 0 62 chr2 177074909 177075005 -76181578 + L1MC4 LINE L1 6614 6703 -1339 230 315 0 0 chr2 177075034 177075126 -76181457 + L1MC4 LINE L1 6612 6703 -1339 851 107 74 0 chr2 177075360 177075482 -76181101 + FLAM_C SINE Alu 1 131 -2 186 290 93 56 chr2 177075905 177076012 -76180571 + MIR3 SINE MIR 4 114 -94 641 267 124 9 chr2 177076391 177076739 -76179844 + L1ME4a LINE L1 5547 5934 -187 21 89 0 0 chr2 177076807 177076863 -76179720 + AT_rich Low_complexity Low_complexity 1 56 0 1002 127 0 0 chr2 177077451 177077585 -76178998 - AluSq/x SINE Alu -178 134 1 1668 160 22 4 chr2 177077787 177078062 -76178521 + AluJo SINE Alu 16 295 -17 813 107 0 0 chr2 177078062 177078202 -76178381 + (TA)n Simple_repeat Simple_repeat 2 141 0 587 191 96 20 chr2 177078465 177078731 -76177852 + MLT1B LTR MaLR 48 390 0 2311 124 67 38 chr2 177079012 177079356 -76177227 + MSTB1 LTR MaLR 1 361 -71 2198 100 30 3 chr2 177079356 177079656 -76176927 - AluSc SINE Alu -1 308 1 2311 124 67 38 chr2 177079656 177079731 -76176852 + MSTB1 LTR MaLR 361 432 0 680 146 0 0 chr2 177079731 177079841 -76176742 + MSTB1-int LTR MaLR 1 110 -1541 1311 256 40 44 chr2 177079841 177079982 -76176601 - LTR38 LTR ERV1 0 556 416 3454 81 19 2 chr2 177079982 177080454 -76176129 - L1PA11 LINE L1 -2 6172 5693 1311 256 40 44 chr2 177080454 177080785 -76175798 - LTR38 LTR ERV1 -140 416 86 6232 183 67 71 chr2 177080817 177082366 -76174217 + MSTB1-int LTR MaLR 109 1651 0 784 105 0 0 chr2 177082366 177082471 -76174112 + MSTB1 LTR MaLR 1 105 -327 230 205 107 107 chr2 177082572 177082694 -76173889 + MLT1K LTR MaLR 450 571 -17 492 178 37 12 chr2 177082752 177082862 -76173721 - MLT1D LTR MaLR 0 548 410 411 221 58 0 chr2 177082884 177082970 -76173613 - MLT1D LTR MaLR -414 91 1 495 233 25 8 chr2 177083271 177083391 -76173192 + MLT1L LTR MaLR 135 256 -359 189 0 0 0 chr2 177083403 177083424 -76173159 + (A)n Simple_repeat Simple_repeat 1 21 0 2079 120 11 0 chr2 177083529 177083812 -76172771 - AluSx SINE Alu -26 286 1 1796 167 37 7 chr2 177083988 177084288 -76172295 + AluJo SINE Alu 1 309 -3 2471 84 0 0 chr2 177084451 177084762 -76171821 - AluY SINE Alu 0 311 1 2414 84 3 3 chr2 177084762 177085070 -76171513 - AluSp SINE Alu -5 308 1 5188 123 22 21 chr2 177085084 177085768 -76170815 + L1PA14 LINE L1 5346 6033 -128 2013 152 3 0 chr2 177085768 177086064 -76170519 + AluSx SINE Alu 1 297 -15 5188 123 22 21 chr2 177086064 177086194 -76170389 + L1PA14 LINE L1 6033 6161 0 281 268 49 55 chr2 177087080 177087244 -76169339 - L1ME3A LINE L1 0 6170 6008 841 200 222 50 chr2 177087311 177087631 -76168952 - MLT1D LTR MaLR 0 505 131 2048 117 0 7 chr2 177087632 177087938 -76168645 - AluSc SINE Alu 0 304 1 1268 95 5 11 chr2 177088037 177088227 -76168356 + L1PA14 LINE L1 5971 6159 -2 4061 59 21 4 chr2 177089268 177089779 -76166804 - SVA Other Other -810 576 57 653 66 11 0 chr2 177089779 177089870 -76166713 + (GGGAGA)n Simple_repeat Simple_repeat 1 92 0 912 196 65 4 chr2 177089870 177090146 -76166437 - MER69 DNA AcHobo -651 1875 1583 1177 262 29 4 chr2 177090219 177090494 -76166089 - MER69 DNA AcHobo -944 282 1 238 129 200 29 chr2 177090558 177090628 -76165955 + LTR33 LTR ERVL 1 82 -439 295 259 186 21 chr2 177090682 177090918 -76165665 + LTR33 LTR ERVL 192 466 -55 442 184 0 0 chr2 177090934 177091010 -76165573 + FLAM_A SINE Alu 10 85 -57 1859 153 0 33 chr2 177091260 177091567 -76165016 + AluJo SINE Alu 1 297 -15 683 282 6 20 chr2 177091618 177091958 -76164625 + L1ME3 LINE L1 4894 5281 -865 638 100 185 69 chr2 177092094 177092224 -76164359 - AluJo SINE Alu -166 146 2 526 196 72 0 chr2 177092233 177092390 -76164193 + L1ME3 LINE L1 5312 5488 -674 2429 81 0 3 chr2 177092789 177093086 -76163497 - AluSg SINE Alu -14 296 1 534 200 108 0 chr2 177093086 177093206 -76163377 - FLAM_A SINE Alu -1 141 9 2568 49 7 3 chr2 177093505 177093813 -76162770 - AluY SINE Alu -2 309 1 1186 128 43 5 chr2 177093989 177094176 -76162407 + L1PB4 LINE L1 5961 6154 -2 1088 202 85 39 chr2 177094220 177094463 -76162120 + L1ME3 LINE L1 5499 5758 -404 1925 151 0 16 chr2 177094463 177094767 -76161816 + AluSx SINE Alu 1 299 -13 1088 202 85 39 chr2 177094767 177094805 -76161778 + L1ME3 LINE L1 5758 5793 -369 1735 192 14 41 chr2 177094817 177095181 -76161402 + MLT1A1 LTR MaLR 12 365 0 247 153 322 0 chr2 177095200 177095259 -76161324 + L1ME3 LINE L1 5935 6012 -150 239 157 88 147 chr2 177095260 177095362 -76161221 + MER3 DNA MER1_type 8 103 -106 234 0 0 0 chr2 177095864 177095890 -76160693 + (CA)n Simple_repeat Simple_repeat 1 26 0 885 283 109 27 chr2 177096114 177096481 -76160102 - MLT1J LTR MaLR -114 397 1 1457 197 46 75 chr2 177096517 177096888 -76159695 - MSTB2 LTR MaLR 0 457 98 845 307 89 7 chr2 177096900 177097304 -76159279 + L2 LINE L2 1955 2391 -923 2285 232 21 23 chr2 177097338 177097868 -76158715 + LTR31 LTR ERV1 73 601 -18 301 242 35 81 chr2 177098021 177098240 -76158343 - L1MC4a LINE L1 -285 5885 5658 2407 101 0 0 chr2 177098240 177098546 -76158037 - AluSg SINE Alu -4 306 1 301 242 35 81 chr2 177098546 177098606 -76157977 - L1MC4a LINE L1 -512 5658 5654 1652 89 0 14 chr2 177098606 177098819 -76157764 - AluSg/x SINE Alu -18 292 83 301 242 35 81 chr2 177098819 177098916 -76157667 - L1MC4a LINE L1 -516 5654 5554 188 128 0 43 chr2 177099114 177099134 -76157449 + (GAAAA)n Simple_repeat Simple_repeat 2 21 -25 2217 109 6 10 chr2 177099134 177099447 -76157136 + AluSx SINE Alu 1 312 0 188 128 0 43 chr2 177099447 177099473 -76157110 + (GAAAA)n Simple_repeat Simple_repeat 21 46 0 2874 107 21 5 chr2 177099914 177100022 -76156561 + LTR23 LTR ERV1 1 106 -331 1778 145 103 34 chr2 177100022 177100373 -76156210 - THE1C LTR MaLR 0 375 1 2874 107 21 5 chr2 177100373 177100694 -76155889 + LTR23 LTR ERV1 106 437 0 467 268 78 28 chr2 177100707 177100886 -76155697 - MIR SINE MIR -74 188 1 198 0 0 0 chr2 177101703 177101725 -76154858 + (T)n Simple_repeat Simple_repeat 1 22 0 2364 66 10 20 chr2 177102673 177102978 -76153605 + AluSq SINE Alu 1 302 -11 368 192 58 10 chr2 177103722 177103826 -76152757 + MIR SINE MIR 128 236 -26 2270 93 0 59 chr2 177103934 177104258 -76152325 - AluSx SINE Alu -7 305 1 1417 183 4 19 chr2 177104346 177104609 -76151974 + AluJb SINE Alu 25 283 -29 435 183 0 0 chr2 177104632 177104703 -76151880 + MER57A LTR ERV1 296 366 -37 887 155 0 13 chr2 177105092 177105247 -76151336 - L1MC1 LINE L1 0 6333 6181 282 233 65 40 chr2 177105493 177105662 -76150921 - L1MC4a LINE L1 -597 5565 5384 1905 123 51 27 chr2 177105681 177105974 -76150609 - AluSx SINE Alu -12 300 1 25 0 0 0 chr2 177105974 177105999 -76150584 + AT_rich Low_complexity Low_complexity 1 25 0 913 199 6 0 chr2 177106000 177106156 -76150427 + AluJb SINE Alu 133 289 -23 1753 157 3 23 chr2 177106163 177106463 -76150120 - AluSx SINE Alu -18 294 1 1550 174 85 7 chr2 177106665 177106826 -76149757 - AluJb SINE Alu -8 304 157 194 0 0 37 chr2 177106826 177106853 -76149730 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1550 174 85 7 chr2 177106853 177106973 -76149610 - AluJb SINE Alu -155 157 1 1609 135 83 11 chr2 177106983 177107249 -76149334 - AluSc SINE Alu -24 285 1 24 0 0 0 chr2 177107256 177107280 -76149303 + AT_rich Low_complexity Low_complexity 1 24 0 1939 142 31 3 chr2 177107442 177107731 -76148852 + AluSx SINE Alu 1 297 -15 202 320 95 30 chr2 177108492 177108554 -76148029 + MIR SINE MIR 50 107 -155 1689 169 29 0 chr2 177108554 177108851 -76147732 - AluJb SINE Alu 0 305 1 202 320 95 30 chr2 177108851 177108987 -76147596 + MIR SINE MIR 107 262 0 2317 107 3 0 chr2 177109867 177110175 -76146408 - AluSq SINE Alu -4 309 1 207 0 0 0 chr2 177110324 177110347 -76146236 + (T)n Simple_repeat Simple_repeat 1 23 0 885 127 55 6 chr2 177110735 177110900 -76145683 + L1MB7 LINE L1 6012 6184 0 2186 119 0 0 chr2 177111685 177111978 -76144605 + AluSx SINE Alu 1 293 -19 2379 70 7 13 chr2 177112197 177112499 -76144084 - AluY SINE Alu -11 300 1 275 170 0 0 chr2 177112688 177112741 -76143842 - AluSp/q SINE Alu -2 301 249 1155 131 0 6 chr2 177114820 177114988 -76141595 - AluSg/x SINE Alu -9 301 135 1826 121 10 42 chr2 177115801 177116107 -76140476 + AluSx SINE Alu 1 296 -16 2001 118 66 0 chr2 177116433 177116721 -76139862 + AluSx SINE Alu 1 307 -5 2398 91 0 3 chr2 177116804 177117102 -76139481 - AluY SINE Alu -14 297 1 2214 118 3 10 chr2 177117106 177117420 -76139163 - AluSx SINE Alu 0 312 1 1034 164 110 138 chr2 177117985 177118339 -76138244 + MER7A DNA MER2_type 4 345 -1 565 70 0 0 chr2 177118506 177118577 -76138006 + U3 snRNA snRNA 1 71 -146 5826 87 7 25 chr2 177118577 177119636 -76136947 + L1PA8A LINE L1 4542 5578 -553 5639 47 33 0 chr2 177119765 177120462 -76136121 + L1PA6 LINE L1 5433 6152 -2 2860 159 62 19 chr2 177120479 177121008 -76135575 + MER68 LTR ERV1 1 552 -10 636 203 38 138 chr2 177121297 177121587 -76134996 - MIR SINE MIR 0 262 2 21 0 0 0 chr2 177122392 177122413 -76134170 + AT_rich Low_complexity Low_complexity 1 21 0 2271 74 35 0 chr2 177122511 177122796 -76133787 - AluSp SINE Alu -18 295 1 1329 208 40 20 chr2 177123249 177123426 -76133157 - AluJo SINE Alu -8 304 117 216 0 0 0 chr2 177123426 177123450 -76133133 + (TG)n Simple_repeat Simple_repeat 1 24 0 1329 208 40 20 chr2 177123450 177123570 -76133013 - AluJo SINE Alu -195 117 1 345 179 30 0 chr2 177123947 177124014 -76132569 - AluJb SINE Alu 0 302 234 1558 127 0 0 chr2 177124021 177124226 -76132357 - AluJb SINE Alu -107 205 1 864 158 0 0 chr2 177125138 177125271 -76131312 - FLAM_C SINE Alu 0 133 1 1684 174 31 0 chr2 177125524 177125817 -76130766 - AluJo SINE Alu -10 302 1 1780 159 3 7 chr2 177126078 177126367 -76130216 + AluJo SINE Alu 1 288 -24 21 0 0 0 chr2 177126367 177126388 -76130195 + AT_rich Low_complexity Low_complexity 1 21 0 496 257 107 33 chr2 177126657 177126929 -76129654 - L2 LINE L2 -6 3307 3016 2473 55 0 3 chr2 177127918 177128211 -76128372 + AluY SINE Alu 1 292 -19 1896 166 10 0 chr2 177128369 177128676 -76127907 + AluSx SINE Alu 3 312 0 2419 70 0 0 chr2 177129268 177129580 -76127003 - AluSx SINE Alu 0 312 1 24 32 0 0 chr2 177130049 177130080 -76126503 + GC_rich Low_complexity Low_complexity 1 31 0 223 155 12 60 chr2 177130231 177130315 -76126268 + (CGG)n Simple_repeat Simple_repeat 3 82 0 2426 70 3 3 chr2 177131960 177132261 -76124322 - AluSp SINE Alu -12 301 1 360 0 0 0 chr2 177132352 177132392 -76124191 + (CA)n Simple_repeat Simple_repeat 2 41 0 230 207 116 96 chr2 177132430 177132628 -76123955 - L1MC4a LINE L1 -1815 5993 5792 219 88 0 0 chr2 177132646 177132680 -76123903 + (TTTTTA)n Simple_repeat Simple_repeat 2 35 0 376 219 171 8 chr2 177132819 177132942 -76123641 - L1MC4a LINE L1 -2224 5584 5442 393 250 91 0 chr2 177132947 177133079 -76123504 - MIR SINE MIR -46 216 73 230 318 0 0 chr2 177133163 177133270 -76123313 + T-rich Low_complexity Low_complexity 1 107 0 189 0 0 0 chr2 177133645 177133666 -76122917 + (TA)n Simple_repeat Simple_repeat 1 21 0 2371 90 3 31 chr2 177133666 177133987 -76122596 - AluSp SINE Alu -1 312 1 2395 63 0 54 chr2 177134806 177135123 -76121460 + AluY SINE Alu 1 300 -11 2327 92 7 0 chr2 177135190 177135484 -76121099 + AluSp SINE Alu 1 296 -17 807 211 92 40 chr2 177135541 177135768 -76120815 + MER8 DNA MER2_type 1 239 0 204 362 78 14 chr2 177135898 177136039 -76120544 + L2 LINE L2 3122 3271 -1 263 204 56 99 chr2 177136249 177136322 -76120261 - L1MEd LINE L1 -5978 141 75 1809 137 3 24 chr2 177136322 177136614 -76119969 - AluJb SINE Alu -15 297 12 263 204 56 99 chr2 177136614 177136682 -76119901 - L1MEd LINE L1 -6044 75 6 770 269 98 52 chr2 177136709 177137156 -76119427 - L1MC4a LINE L1 -1906 5902 5435 342 186 0 41 chr2 177137188 177137285 -76119298 - L1MC5 LINE L1 -168 7793 7701 2489 147 9 20 chr2 177137294 177137744 -76118839 + L1MB3 LINE L1 5738 6182 -1 923 211 0 0 chr2 177137748 177137923 -76118660 + FAM SINE Alu 1 175 0 2151 123 3 0 chr2 177137976 177138278 -76118305 - AluSx SINE Alu -9 303 1 248 296 28 0 chr2 177138320 177138428 -76118155 - L1MC4 LINE L1 -5 8037 7927 348 24 0 0 chr2 177138651 177138692 -76117891 + (TCG)n Simple_repeat Simple_repeat 2 42 0 1998 160 6 6 chr2 177138690 177139042 -76117541 - AluSx SINE Alu 0 352 1 1990 223 72 54 chr2 177139044 177139588 -76116995 - L1MEc LINE L1 -3325 2890 2357 2405 87 0 0 chr2 177139588 177139886 -76116697 + AluSg SINE Alu 1 298 -12 1990 223 72 54 chr2 177139886 177139901 -76116682 - L1MEc LINE L1 -3858 2357 2344 1690 197 0 17 chr2 177139901 177140196 -76116387 - AluJb SINE Alu -22 290 1 1990 223 72 54 chr2 177140196 177140238 -76116345 - L1MEc LINE L1 -3871 2344 2304 414 0 0 0 chr2 177140238 177140284 -76116299 + (TG)n Simple_repeat Simple_repeat 1 46 0 1990 223 72 54 chr2 177140284 177140843 -76115740 - L1MEc LINE L1 -3911 2304 1731 1382 274 41 35 chr2 177140841 177141378 -76115205 - L1MEc LINE L1 -5765 631 92 * 23 33 0 0 chr2 177141654 177141684 -76114899 + AT_rich Low_complexity Low_complexity 1 30 0 1129 118 25 12 chr2 177141859 177142020 -76114563 - AluSq SINE Alu -9 304 142 4124 77 48 10 chr2 177142020 177142608 -76113975 - LTR66 LTR ERVL 0 610 1 817 150 0 23 chr2 177142621 177142754 -76113829 - FLAM_C SINE Alu -3 130 1 1626 199 36 34 chr2 177142852 177143269 -76113314 - LTR36 LTR ERV1 -5 606 189 1505 134 13 53 chr2 177143242 177143341 -76113242 - LTR36 LTR ERV1 -324 287 186 * 1937 166 0 0 chr2 177143341 177143648 -76112935 - AluJo SINE Alu -5 307 1 1505 134 13 53 chr2 177143648 177143732 -76112851 - LTR36 LTR ERV1 -425 186 100 2445 61 0 0 chr2 177143732 177144027 -76112556 + AluY SINE Alu 1 295 -16 1505 134 13 53 chr2 177144027 177144141 -76112442 - LTR36 LTR ERV1 -511 100 1 268 280 0 0 chr2 177144195 177144288 -76112295 - L1MEc LINE L1 -4092 2304 2212 1892 173 0 13 chr2 177144289 177144590 -76111993 - AluJb SINE Alu -7 305 9 1996 92 96 0 chr2 177144753 177145024 -76111559 + AluSc SINE Alu 1 297 -12 210 271 14 29 chr2 177145278 177145348 -76111235 - MIR3 SINE MIR -12 196 128 779 214 93 0 chr2 177145537 177145719 -76110864 + MER58A DNA MER1_type 3 201 -23 2057 129 3 25 chr2 177145730 177146047 -76110536 + AluSx SINE Alu 1 310 -2 2005 155 3 0 chr2 177146557 177146918 -76109665 - AluSx SINE Alu 0 362 1 2091 63 11 0 chr2 177147094 177147362 -76109221 + L1PA8 LINE L1 5897 6167 -5 319 226 34 167 chr2 177148382 177148517 -76108066 - L1MC/D LINE L1 -2181 5696 5603 9796 55 6 102 chr2 177148517 177150025 -76106558 - SVA Other Other -3 1383 21 319 226 34 167 chr2 177150025 177150123 -76106460 - L1MC/D LINE L1 -2274 5603 5494 313 214 19 88 chr2 177150124 177150235 -76106348 - L1MC/D LINE L1 -3241 2974 2876 2060 123 30 10 chr2 177150235 177150537 -76106046 - AluSx SINE Alu -4 308 1 313 214 19 88 chr2 177150537 177150584 -76105999 - L1MC/D LINE L1 -3339 2876 2827 2167 115 0 32 chr2 177150584 177150896 -76105687 - AluSq SINE Alu -11 302 1 892 189 11 23 chr2 177150908 177151083 -76105500 - AluJb SINE Alu -11 301 129 1219 242 11 0 chr2 177151193 177151477 -76105106 - MLT1F1 LTR MaLR -6 561 233 289 217 98 0 chr2 177151477 177151569 -76105014 - L1MC/D LINE L1 -4672 1724 1624 284 204 0 0 chr2 177151597 177151646 -76104937 - AluSp SINE Alu -113 190 142 1284 280 89 44 chr2 177151652 177151751 -76104832 - L1MEc LINE L1 -4749 1580 1487 1986 143 0 3 chr2 177151751 177152070 -76104513 - AluSx SINE Alu 0 318 1 1284 280 89 44 chr2 177152070 177152252 -76104331 - L1MEc LINE L1 -4842 1487 1314 2145 90 52 3 chr2 177152252 177152541 -76104042 - AluY SINE Alu -8 303 1 1284 280 89 44 chr2 177152541 177152867 -76103716 - L1MEc LINE L1 -5015 1314 1004 2066 102 0 14 chr2 177152867 177153187 -76103396 - AluSc SINE Alu 0 316 1 1284 280 89 44 chr2 177153187 177153677 -76102906 - L1MEc LINE L1 -5325 1004 531 247 235 0 0 chr2 177153675 177153726 -76102857 - L1MEc LINE L1 -6296 100 50 * 266 167 128 0 chr2 177153764 177153842 -76102741 - L1MC/D LINE L1 -2370 5438 5351 1793 163 51 43 chr2 177153879 177154434 -76102149 - MLT2A2 LTR ERVL 0 554 1 2453 81 3 0 chr2 177154498 177154807 -76101776 + AluSg SINE Alu 1 310 0 343 309 62 53 chr2 177154985 177155228 -76101355 - L1MC/D LINE L1 -1099 5047 4803 28 48 0 0 chr2 177155353 177155395 -76101188 + AT_rich Low_complexity Low_complexity 1 42 0 438 280 155 16 chr2 177155690 177155883 -76100700 - L1MC/D LINE L1 -1366 4780 4561 351 200 83 48 chr2 177156413 177156558 -76100025 + L1ME3A LINE L1 6016 6165 -5 380 252 0 61 chr2 177157059 177157174 -76099409 + L2 LINE L2 2968 3075 -238 1292 179 14 14 chr2 177157209 177157432 -76099151 - AluJb SINE Alu -5 307 85 358 267 219 7 chr2 177157439 177157585 -76098998 + L2 LINE L2 3123 3299 -14 2056 120 0 27 chr2 177157652 177157792 -76098791 + AluSx SINE Alu 1 143 -169 2560 57 0 13 chr2 177157792 177158107 -76098476 + AluY SINE Alu 1 311 0 2056 120 0 27 chr2 177158107 177158266 -76098317 + AluSx SINE Alu 143 292 -20 21 36 0 0 chr2 177158328 177158356 -76098227 + AT_rich Low_complexity Low_complexity 1 28 0 489 179 0 0 chr2 177158358 177158436 -76098147 - FLAM SINE Alu -18 125 48 2217 105 3 6 chr2 177159038 177159351 -76097232 + AluSx SINE Alu 1 312 0 329 71 0 36 chr2 177159393 177159449 -76097134 + Alu SINE Alu 247 300 0 2318 114 3 0 chr2 177159525 177159831 -76096752 - AluSx SINE Alu -3 309 3 291 301 110 10 chr2 177160567 177160776 -76095807 - L1ME LINE L1 -330 5791 5562 351 246 66 75 chr2 177161350 177161504 -76095079 - L1MC5 LINE L1 -105 7856 7703 1592 136 115 49 chr2 177161504 177161790 -76094793 - AluSx SINE Alu -7 305 1 351 246 66 75 chr2 177161790 177161863 -76094720 - L1MC5 LINE L1 -258 7703 7631 422 282 40 0 chr2 177162144 177162318 -76094265 - L1MC5 LINE L1 -519 7442 7262 2201 121 0 7 chr2 177162387 177162693 -76093890 - AluSx SINE Alu -7 305 2 553 281 153 52 chr2 177162910 177163474 -76093109 - L1ME LINE L1 -750 5396 4761 810 144 0 8 chr2 177163474 177163599 -76092984 - FLAM_C SINE Alu -9 124 1 553 281 153 52 chr2 177163599 177163804 -76092779 - L1ME LINE L1 -1385 4761 4578 2269 117 0 0 chr2 177163815 177164124 -76092459 - AluSx SINE Alu -3 309 1 1108 165 213 24 chr2 177164346 177164600 -76091983 + AluJo SINE Alu 1 302 0 1738 109 98 18 chr2 177164654 177164930 -76091653 + AluSx SINE Alu 1 298 -14 22 56 0 0 chr2 177166309 177166345 -76090238 + AT_rich Low_complexity Low_complexity 1 36 0 1690 154 11 32 chr2 177166560 177166845 -76089738 + AluJo SINE Alu 1 279 -33 2239 105 3 3 chr2 177167344 177167639 -76088944 - AluSq SINE Alu -18 295 1 1087 169 6 0 chr2 177168501 177168678 -76087905 - AluY SINE Alu -13 298 121 567 307 35 35 chr2 177169203 177169252 -76087331 - MIR3 SINE MIR -1 207 159 2519 47 10 0 chr2 177169252 177169549 -76087034 - AluY SINE Alu -10 301 2 567 307 35 35 chr2 177169549 177169701 -76086882 - MIR3 SINE MIR -48 160 6 351 0 0 0 chr2 177169702 177169741 -76086842 + (TATTG)n Simple_repeat Simple_repeat 2 40 0 2157 92 3 24 chr2 177169741 177170034 -76086549 - AluSx SINE Alu -25 287 1 300 293 75 57 chr2 177171384 177171490 -76085093 - MIR3 SINE MIR -40 168 61 21 95 0 0 chr2 177171795 177171858 -76084725 + AT_rich Low_complexity Low_complexity 1 63 0 33 73 0 0 chr2 177171906 177171974 -76084609 + AT_rich Low_complexity Low_complexity 1 68 0 1117 261 8 12 chr2 177172200 177172457 -76084126 + MIR SINE MIR 2 257 -5 201 121 0 0 chr2 177173306 177173339 -76083244 + (TG)n Simple_repeat Simple_repeat 2 34 0 931 168 5 5 chr2 177173443 177173628 -76082955 - L1PA15 LINE L1 -137 6028 5844 2231 124 3 0 chr2 177173877 177174184 -76082399 - AluSx SINE Alu -4 308 1 319 91 73 0 chr2 177174315 177174370 -76082213 - Alu SINE Alu -2 300 242 309 214 10 61 chr2 177174376 177174474 -76082109 - L1MC4 LINE L1 -1346 6696 6604 662 166 27 17 chr2 177174474 177174709 -76081874 + (TA)n Simple_repeat Simple_repeat 1 237 0 198 132 57 0 chr2 177174724 177174777 -76081806 + (TA)n Simple_repeat Simple_repeat 1 56 0 303 221 70 12 chr2 177174780 177174866 -76081717 - L1MC4 LINE L1 -1339 6703 6613 325 230 0 80 chr2 177174915 177175015 -76081568 - L1MC4 LINE L1 -1339 6703 6612 409 86 54 0 chr2 177175015 177175108 -76081475 + (TA)n Simple_repeat Simple_repeat 1 98 0 2086 141 10 0 chr2 177175164 177175468 -76081115 + AluSx SINE Alu 1 307 -5 431 322 38 38 chr2 177175526 177175709 -76080874 - MIR3 SINE MIR -7 201 19 970 290 74 44 chr2 177175738 177176265 -76080318 - MLT1H1 LTR MaLR -12 543 1 2144 122 3 0 chr2 177176543 177176837 -76079746 - AluSx SINE Alu -17 295 1 2266 76 24 0 chr2 177176861 177177152 -76079431 - AluY SINE Alu -13 298 1 2032 143 13 0 chr2 177178004 177178312 -76078271 + AluSx SINE Alu 1 312 0 2246 95 3 0 chr2 177178582 177178878 -76077705 + AluSg SINE Alu 1 297 -13 757 262 151 4 chr2 177178957 177179236 -76077347 - L3 LINE CR1 -4 1573 1254 366 311 97 65 chr2 177179343 177179664 -76076919 - L3 LINE CR1 -550 1027 697 210 329 43 0 chr2 177179666 177179736 -76076847 - L3 LINE CR1 -1013 564 492 2419 87 3 0 chr2 177180468 177180779 -76075804 - AluSp SINE Alu 0 313 2 2245 93 6 19 chr2 177180781 177180814 -76075769 - AluSx SINE Alu 0 312 280 423 0 0 0 chr2 177180814 177180861 -76075722 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2245 93 6 19 chr2 177180861 177181138 -76075445 - AluSx SINE Alu -32 280 6 607 293 142 0 chr2 177181564 177181817 -76074766 - L1ME LINE L1 -326 5795 5507 233 269 97 0 chr2 177181900 177181993 -76074590 + L2 LINE L2 2911 3012 -260 543 69 0 0 chr2 177183245 177183317 -76073266 + (TA)n Simple_repeat Simple_repeat 2 73 0 25 31 0 0 chr2 177183360 177183392 -76073191 + AT_rich Low_complexity Low_complexity 1 32 0 243 0 0 0 chr2 177184318 177184345 -76072238 + (CA)n Simple_repeat Simple_repeat 2 28 0 271 304 36 54 chr2 177185527 177185639 -76070944 - MIR SINE MIR -61 147 38 1651 171 7 27 chr2 177186265 177186564 -76070019 - AluJb SINE Alu -19 293 1 1323 150 22 22 chr2 177186827 177187053 -76069530 + AluJo SINE Alu 87 312 0 22 70 0 0 chr2 177187677 177187720 -76068863 + AT_rich Low_complexity Low_complexity 1 43 0 1913 122 37 0 chr2 177188717 177188988 -76067595 + AluSx SINE Alu 1 281 -31 21 0 0 0 chr2 177189151 177189172 -76067411 + AT_rich Low_complexity Low_complexity 1 21 0 247 267 17 8 chr2 177189448 177189568 -76067015 + (TTA)n Simple_repeat Simple_repeat 1 121 0 277 273 101 45 chr2 177189614 177189812 -76066771 - L1ME4a LINE L1 -11 6110 5902 257 181 191 48 chr2 177189813 177189918 -76066665 - L1ME4a LINE L1 -290 5831 5712 236 192 0 0 chr2 177190135 177190187 -76066396 + L1MC4 LINE L1 6652 6703 -1339 1952 139 10 17 chr2 177190201 177190503 -76066080 - AluSx SINE Alu -12 300 1 728 294 55 33 chr2 177190503 177190762 -76065821 - MIR SINE MIR 0 262 1 689 296 97 5 chr2 177191063 177191303 -76065280 - MIR SINE MIR -1 261 1 2625 40 0 0 chr2 177191469 177191766 -76064817 - AluY SINE Alu -14 297 1 2177 93 0 4 chr2 177191766 177192045 -76064538 - AluSq SINE Alu -35 278 1 23 0 0 0 chr2 177192214 177192237 -76064346 + AT_rich Low_complexity Low_complexity 1 23 0 6690 57 16 0 chr2 177192274 177193331 -76063252 - L1PA7 LINE L1 0 6154 5081 514 252 16 8 chr2 177193633 177193756 -76062827 - MER94 DNA DNA -9 125 2 300 261 52 43 chr2 177193761 177193876 -76062707 + L2 LINE L2 1901 2016 -1298 21 0 0 0 chr2 177194068 177194089 -76062494 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr2 177194380 177194415 -76062168 + AT_rich Low_complexity Low_complexity 1 35 0 391 285 148 81 chr2 177194676 177195196 -76061387 + L2 LINE L2 2252 2806 -508 417 316 75 90 chr2 177195261 177195379 -76061204 + L2 LINE L2 2943 3061 -211 2208 105 3 3 chr2 177195379 177195675 -76060908 - AluSx SINE Alu -16 296 1 417 316 75 90 chr2 177195675 177195891 -76060692 + L2 LINE L2 3061 3272 0 762 169 0 8 chr2 177196505 177196629 -76059954 + FLAM_A SINE Alu 1 123 -10 383 304 125 24 chr2 177197634 177197802 -76058781 - MIR SINE MIR -48 214 30 905 147 0 0 chr2 177198304 177198440 -76058143 - AluJo SINE Alu -176 136 1 28 29 0 0 chr2 177199303 177199338 -76057245 + AT_rich Low_complexity Low_complexity 1 35 0 1498 123 9 0 chr2 177199794 177200014 -76056569 - AluSc SINE Alu -1 308 87 221 373 60 40 chr2 177200299 177200526 -76056057 + L2 LINE L2 2608 2846 -468 1697 116 30 26 chr2 177200526 177200794 -76055789 - AluSx SINE Alu 0 312 44 221 373 60 40 chr2 177200794 177200915 -76055668 + L2 LINE L2 2846 2963 -351 326 318 30 3 chr2 177200943 177201060 -76055523 - MER5B DNA MER1_type -8 181 51 225 373 13 13 chr2 177201263 177201338 -76055245 - L2 LINE L2 -36 3236 3162 2447 57 10 10 chr2 177201587 177201888 -76054695 - AluY SINE Alu -10 301 1 1184 285 114 59 chr2 177201911 177202183 -76054400 - L2 LINE L2 -431 2883 2627 2057 124 12 67 chr2 177202183 177202585 -76053998 + L1MA7 LINE L1 5912 6291 0 1184 285 114 59 chr2 177202585 177203069 -76053514 - L2 LINE L2 -687 2627 2086 187 296 0 0 chr2 177203153 177203197 -76053386 - L2 LINE L2 -606 2708 2665 411 284 175 24 chr2 177203429 177203640 -76052943 - MIR SINE MIR -19 243 1 301 79 0 0 chr2 177203895 177203933 -76052650 + tRNA-Lys-AAA tRNA tRNA 2 39 -37 528 239 16 87 chr2 177204099 177204283 -76052300 - MIR SINE MIR -20 242 72 273 327 0 10 chr2 177204404 177204503 -76052080 - L1ME LINE L1 -516 5605 5508 4288 169 45 11 chr2 177204989 177205548 -76051035 - L1MB7 LINE L1 -22 6162 5563 1622 190 10 17 chr2 177205548 177205848 -76050735 - AluJo SINE Alu -14 298 1 4288 169 45 11 chr2 177205848 177206125 -76050458 - L1MB7 LINE L1 -621 5563 5297 765 171 55 0 chr2 177206346 177206510 -76050073 - L1MB4 LINE L1 0 6180 6008 30 77 0 0 chr2 177206747 177206812 -76049771 + AT_rich Low_complexity Low_complexity 1 65 0 225 0 0 0 chr2 177207612 177207637 -76048946 + (TG)n Simple_repeat Simple_repeat 2 26 0 1787 220 230 22 chr2 177207709 177208003 -76048580 - L1MC4 LINE L1 -95 7713 7482 2198 112 0 7 chr2 177208003 177208299 -76048284 - AluSx SINE Alu -18 294 1 1787 220 230 22 chr2 177208299 177209079 -76047504 - L1MC4 LINE L1 -326 7482 6453 2165 128 0 3 chr2 177210459 177210764 -76045819 - AluSq SINE Alu -7 306 3 240 372 6 0 chr2 177210793 177210925 -76045658 - MIR SINE MIR -59 149 29 237 253 81 46 chr2 177210950 177211046 -76045537 + MIR SINE MIR 10 108 -100 26 50 0 0 chr2 177211048 177211088 -76045495 + AT_rich Low_complexity Low_complexity 1 40 0 864 136 8 0 chr2 177211253 177211385 -76045198 - FLAM_C SINE Alu 0 133 1 543 300 163 58 chr2 177211575 177211888 -76044695 - L2 LINE L2 -3 3269 2924 7401 34 0 7 chr2 177212165 177213242 -76043341 + L1PA4 LINE L1 5081 6154 -1 601 340 138 17 chr2 177213696 177214161 -76042422 - L2 LINE L2 -656 2658 2138 465 215 190 65 chr2 177214322 177214476 -76042107 - MIR SINE MIR -30 232 99 2025 114 4 0 chr2 177214476 177214748 -76041835 + AluSx SINE Alu 4 276 -36 465 215 190 65 chr2 177214748 177214768 -76041815 - MIR SINE MIR -163 99 83 1780 165 7 13 chr2 177214768 177215071 -76041512 + AluJb SINE Alu 1 301 -11 465 215 190 65 chr2 177215071 177215095 -76041488 - MIR SINE MIR -179 83 8 2046 150 11 11 chr2 177215199 177215559 -76041024 - L1MB2 LINE L1 -2 6169 5810 686 312 20 0 chr2 177216093 177216292 -76040291 + MIR SINE MIR 50 252 -10 193 333 53 40 chr2 177216438 177216513 -76040070 - L2 LINE L2 -49 3223 3148 336 307 24 47 chr2 177217186 177217313 -76039270 + MIR SINE MIR 25 148 -60 2347 94 0 3 chr2 177217516 177217813 -76038770 + AluSc SINE Alu 1 296 -13 1876 222 90 23 chr2 177218556 177219069 -76037514 - MER74B LTR ERVL -10 612 66 1880 130 39 23 chr2 177219069 177219376 -76037207 + AluSx SINE Alu 1 312 0 21 36 0 0 chr2 177219550 177219578 -76037005 + AT_rich Low_complexity Low_complexity 1 28 0 21 89 0 0 chr2 177220209 177220265 -76036318 + AT_rich Low_complexity Low_complexity 1 56 0 2195 98 3 10 chr2 177222056 177222352 -76034231 + AluSq SINE Alu 1 294 -19 380 324 6 55 chr2 177222861 177223043 -76033540 + MER5A DNA MER1_type 1 173 -16 1827 168 7 0 chr2 177223147 177223450 -76033133 - AluJo SINE Alu -7 305 1 2599 56 0 0 chr2 177223835 177224139 -76032444 + AluY SINE Alu 1 304 -7 22 35 0 0 chr2 177224618 177224647 -76031936 + AT_rich Low_complexity Low_complexity 1 29 0 252 204 0 0 chr2 177224668 177224712 -76031871 + MER113 DNA MER1_type? 464 507 -14 2283 103 0 0 chr2 177224842 177225143 -76031440 - AluSx SINE Alu -11 301 1 606 234 0 0 chr2 177225204 177225328 -76031255 - FLAM_A SINE Alu -9 124 1 258 32 0 0 chr2 177226642 177226673 -76029910 + (CAA)n Simple_repeat Simple_repeat 1 31 0 296 297 51 22 chr2 177226801 177226939 -76029644 + L2 LINE L2 3172 3313 0 386 155 0 6 chr2 177227246 177227316 -76029267 - Alu SINE Alu -246 55 1 299 282 0 0 chr2 177227463 177227534 -76029049 + L2 LINE L2 3201 3271 -1 1762 185 0 10 chr2 177227929 177228232 -76028351 - AluJo SINE Alu -10 302 3 2375 93 3 0 chr2 177228813 177229123 -76027460 - AluSp SINE Alu -2 311 1 722 262 143 58 chr2 177229154 177229282 -76027301 - HAL1 LINE L1 -1472 1035 919 198 0 0 0 chr2 177229282 177229304 -76027279 + (TTA)n Simple_repeat Simple_repeat 3 24 0 6977 38 0 0 chr2 177229304 177230434 -76026149 - L1PA5 LINE L1 -18 6136 4993 722 262 143 58 chr2 177230434 177230731 -76025852 - HAL1 LINE L1 -1587 920 573 293 189 14 54 chr2 177230855 177230929 -76025654 - HAL1 LINE L1 -2154 353 283 * 1024 200 47 81 chr2 177230925 177231028 -76025555 - L1M LINE L1 -817 5329 5224 1454 186 47 10 chr2 177231028 177231324 -76025259 - AluJb SINE Alu -3 309 3 1024 200 47 81 chr2 177231324 177231645 -76024938 - L1M LINE L1 -922 5224 4934 2276 76 3 30 chr2 177232028 177232331 -76024252 - AluY SINE Alu -16 295 1 1951 151 7 3 chr2 177232331 177232629 -76023954 - AluJb SINE Alu -13 299 1 28 48 0 0 chr2 177232736 177232778 -76023805 + AT_rich Low_complexity Low_complexity 1 42 0 960 125 30 12 chr2 177232815 177232983 -76023600 - L1MA4 LINE L1 -36 6264 6094 247 298 122 30 chr2 177233001 177233525 -76023058 - L1MEd LINE L1 -3112 3017 2446 2680 190 4 15 chr2 177233525 177233985 -76022598 + MER44D DNA MER2_type 1 455 -250 1437 175 58 21 chr2 177233985 177234311 -76022272 - MER44D DNA MER2_type 0 609 2 * 1448 135 46 23 chr2 177234311 177234558 -76022025 + Tigger7 DNA MER2_type 2235 2487 0 480 250 8 16 chr2 177234649 177234773 -76021810 - L1MEd LINE L1 -5746 373 251 476 271 36 0 chr2 177234798 177234938 -76021645 - L1MEd LINE L1 -5950 169 25 2176 80 4 0 chr2 177236085 177236359 -76020224 + AluSg SINE Alu 1 275 -35 358 284 23 68 chr2 177236895 177237071 -76019512 - MIR SINE MIR -3 259 92 265 240 248 24 chr2 177237610 177237735 -76018848 + MIR3 SINE MIR 30 182 -26 282 268 49 0 chr2 177237790 177237872 -76018711 - MIR SINE MIR -9 253 168 229 283 145 53 chr2 177237947 177238099 -76018484 - MIR SINE MIR -93 169 4 269 232 0 29 chr2 177238710 177238779 -76017804 - MIR SINE MIR -10 252 186 31 44 0 0 chr2 177238836 177238881 -76017702 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr2 177239164 177239186 -76017397 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr2 177241041 177241070 -76015513 + AT_rich Low_complexity Low_complexity 1 29 0 33 56 0 0 chr2 177241756 177241810 -76014773 + AT_rich Low_complexity Low_complexity 1 54 0 24 32 0 0 chr2 177241932 177241963 -76014620 + AT_rich Low_complexity Low_complexity 1 31 0 25 0 0 0 chr2 177243157 177243182 -76013401 + AT_rich Low_complexity Low_complexity 1 25 0 205 333 18 0 chr2 177244210 177244267 -76012316 - L2 LINE L2 -94 3178 3121 494 333 142 30 chr2 177244447 177245171 -76011412 - L2 LINE L2 -638 2676 1872 355 76 0 3 chr2 177245406 177245463 -76011120 + THE1B LTR MaLR 284 400 -28 287 266 112 35 chr2 177245738 177245907 -76010676 + MIR SINE MIR 71 252 -10 722 200 126 4 chr2 177246080 177246310 -76010273 - MIR SINE MIR -3 259 2 2699 150 126 10 chr2 177247033 177247525 -76009058 + MER44D DNA MER2_type 1 604 -1 31 82 0 0 chr2 177248731 177248804 -76007779 + AT_rich Low_complexity Low_complexity 1 73 0 359 259 190 9 chr2 177248884 177249100 -76007483 + L1MC4 LINE L1 7788 8042 0 379 303 130 62 chr2 177250037 177250360 -76006223 + HAL1 LINE L1 837 1181 -1326 705 195 128 12 chr2 177250360 177250524 -76006059 - MLT1F LTR MaLR -13 529 347 562 143 64 71 chr2 177250526 177250666 -76005917 + FLAM_C SINE Alu 3 141 -2 1071 192 164 41 chr2 177250679 177250996 -76005587 - MLT1F LTR MaLR -181 361 6 795 287 51 39 chr2 177251000 177251411 -76005172 + HAL1 LINE L1 1276 1691 -816 714 214 0 0 chr2 177251417 177251548 -76005035 + FLAM_A SINE Alu 2 132 -1 30 0 0 0 chr2 177251804 177251834 -76004749 + AT_rich Low_complexity Low_complexity 1 30 0 312 266 126 35 chr2 177252125 177252268 -76004315 + HAL1b LINE L1 749 904 -444 309 319 13 51 chr2 177252273 177252430 -76004153 + HAL1b LINE L1 756 906 -442 1633 138 41 38 chr2 177252452 177252641 -76003942 - MER46B DNA MER2_type -2495 236 169 2014 90 56 7 chr2 177252641 177252929 -76003654 - AluSx SINE Alu -10 302 1 1633 138 41 38 chr2 177252929 177253029 -76003554 - MER46B DNA MER2_type -2562 169 71 309 106 0 0 chr2 177253029 177253076 -76003507 + L1 LINE L1 3357 3403 -2743 942 279 15 38 chr2 177253076 177253341 -76003242 + MLT2B3 LTR ERVL 288 546 -8 429 165 12 0 chr2 177253351 177253436 -76003147 + L1M2a LINE L1 2026 2111 -5057 420 145 0 188 chr2 177253441 177253558 -76003025 - MER46B DNA MER2_type -266 95 1 186 318 92 64 chr2 177254153 177254326 -76002257 + L3 LINE CR1 1368 1545 -32 3250 54 0 0 chr2 177255177 177255583 -76001000 - L1PA5 LINE L1 -4 6150 5745 628 267 68 38 chr2 177256210 177256446 -76000137 + MARNA DNA Mariner 101 343 -243 37 76 0 0 chr2 177256567 177256646 -75999937 + AT_rich Low_complexity Low_complexity 1 79 0 201 39 0 0 chr2 177256668 177256694 -75999889 + (GA)n Simple_repeat Simple_repeat 2 27 0 1372 235 75 49 chr2 177256696 177257086 -75999497 + L1MC4 LINE L1 6492 6870 -1172 2246 117 0 0 chr2 177257086 177257386 -75999197 - AluSx SINE Alu -12 300 1 1372 235 75 49 chr2 177257386 177258025 -75998558 + L1MC4 LINE L1 6870 7706 -336 2308 93 3 0 chr2 177258025 177258327 -75998256 + AluSg SINE Alu 1 303 -7 1661 159 11 7 chr2 177258355 177258632 -75997951 + AluJb SINE Alu 1 278 -34 1573 172 3 0 chr2 177258732 177259022 -75997561 + AluSg SINE Alu 20 310 0 225 0 0 0 chr2 177259023 177259048 -75997535 + (TA)n Simple_repeat Simple_repeat 1 25 0 292 179 9 0 chr2 177259141 177259196 -75997387 + AluSp SINE Alu 136 181 -122 1329 168 7 74 chr2 177259197 177259472 -75997111 + AluJo SINE Alu 23 315 3 224 89 0 22 chr2 177259472 177259517 -75997066 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 724 144 36 36 chr2 177259517 177259656 -75996927 + L1PA16 LINE L1 6028 6166 0 1329 168 7 74 chr2 177259656 177259676 -75996907 + AluJo SINE Alu 279 299 -13 497 313 140 31 chr2 177260069 177260577 -75996006 - L2 LINE L2 -880 2434 1872 2004 92 0 0 chr2 177260621 177260872 -75995711 + AluSc SINE Alu 39 289 -20 25 0 0 0 chr2 177260877 177260902 -75995681 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr2 177261309 177261337 -75995246 + AT_rich Low_complexity Low_complexity 1 28 0 277 272 29 52 chr2 177262053 177262189 -75994394 - MARNA DNA Mariner -132 454 322 829 171 0 0 chr2 177262271 177262394 -75994189 - FLAM_C SINE Alu -18 125 3 327 244 39 0 chr2 177262784 177262862 -75993721 + MIR3 SINE MIR 85 165 -43 300 308 100 15 chr2 177263192 177263322 -75993261 - L3 LINE CR1 -1 1576 1436 2190 127 18 11 chr2 177263580 177263944 -75992639 - MLT1A1 LTR MaLR -2 455 1 28 29 0 0 chr2 177265007 177265042 -75991541 + AT_rich Low_complexity Low_complexity 1 35 0 812 181 0 0 chr2 177265454 177265587 -75990996 - FLAM_A SINE Alu 0 133 1 2020 99 31 24 chr2 177265727 177265893 -75990690 - AluSg SINE Alu -14 296 133 200 33 0 33 chr2 177265893 177265923 -75990660 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1994 97 56 0 chr2 177265923 177266191 -75990392 - AluSg SINE Alu -27 283 1 2020 99 31 24 chr2 177266191 177266316 -75990267 - AluSg SINE Alu -176 134 2 1885 117 0 0 chr2 177266432 177266698 -75989885 + AluY SINE Alu 45 310 -1 324 322 86 89 chr2 177267455 177267803 -75988780 - L2 LINE L2 -31 3241 2895 22 0 0 0 chr2 177268656 177268678 -75987905 + AT_rich Low_complexity Low_complexity 1 22 0 275 251 108 38 chr2 177268795 177268907 -75987676 - MIR SINE MIR -97 111 27 198 283 43 0 chr2 177269680 177269726 -75986857 + MIR SINE MIR 103 150 -58 323 207 126 54 chr2 177270227 177270338 -75986245 + MIR SINE MIR 119 237 -25 21 0 0 0 chr2 177270903 177270924 -75985659 + AT_rich Low_complexity Low_complexity 1 21 0 1731 224 57 51 chr2 177272103 177272852 -75983731 - L1MC4 LINE L1 -744 7217 6493 21 36 0 0 chr2 177273115 177273143 -75983440 + AT_rich Low_complexity Low_complexity 1 28 0 247 295 101 6 chr2 177273198 177273262 -75983321 - L1M4 LINE L1 -775 5371 5314 861 214 111 69 chr2 177273262 177273551 -75983032 - AluJo SINE Alu 0 302 2 247 295 101 6 chr2 177273551 177273822 -75982761 - L1M4 LINE L1 -832 5314 5004 3706 107 21 4 chr2 177273838 177274398 -75982185 - L1PA16 LINE L1 -9 6157 5588 314 269 90 48 chr2 177274413 177274580 -75982003 + L1MC4a LINE L1 5809 5982 -1826 336 262 32 24 chr2 177274582 177274708 -75981875 + L1M4 LINE L1 4823 4949 -1197 * 1939 203 51 48 chr2 177274700 177275226 -75981357 - L1MC4 LINE L1 -269 7773 7246 671 305 41 24 chr2 177275582 177275828 -75980755 - MIR SINE MIR -10 252 3 23 33 0 0 chr2 177275976 177276006 -75980577 + AT_rich Low_complexity Low_complexity 1 30 0 6429 179 22 11 chr2 177276326 177278569 -75978014 - L1MC1 LINE L1 -13 6320 4061 236 271 57 2 chr2 177278909 177279012 -75977571 - L1P LINE L1 -745 5406 5300 336 325 123 44 chr2 177279295 177279703 -75976880 - L1M4 LINE L1 -1092 5054 4581 2209 116 0 0 chr2 177279703 177279995 -75976588 - AluSx SINE Alu -20 292 1 336 325 123 44 chr2 177279995 177280196 -75976387 - L1M4 LINE L1 -1565 4581 4397 26 30 0 0 chr2 177280399 177280432 -75976151 + AT_rich Low_complexity Low_complexity 1 33 0 185 318 59 24 chr2 177280902 177280987 -75975596 - L2 LINE L2 -787 2527 2440 281 149 0 0 chr2 177281126 177281173 -75975410 + MADE1 DNA Mariner 34 80 0 755 316 130 8 chr2 177281192 177281660 -75974923 - L2 LINE L2 -922 2392 1868 232 244 0 0 chr2 177281905 177281950 -75974633 + L2 LINE L2 3263 3307 -6 714 156 23 31 chr2 177282214 177282342 -75974241 - FLAM_C SINE Alu -16 127 1 1413 160 126 11 chr2 177282443 177282712 -75973871 - AluJb SINE Alu -1 301 2 729 169 0 29 chr2 177283368 177283504 -75973079 + FLAM_C SINE Alu 1 132 -1 2808 156 17 51 chr2 177284256 177284756 -75971827 - L1MB5 LINE L1 -15 6159 5681 1838 131 0 0 chr2 177284756 177285016 -75971567 + AluSx SINE Alu 43 302 -10 2808 156 17 51 chr2 177285016 177285106 -75971477 - L1MB5 LINE L1 -493 5681 5589 317 265 34 86 chr2 177285934 177286051 -75970532 - L2 LINE L2 -1 3271 3161 342 219 8 73 chr2 177286913 177287036 -75969547 - MLT1J LTR MaLR -2 509 395 268 310 49 35 chr2 177287070 177287212 -75969371 - MLT1J LTR MaLR -191 320 177 1981 136 43 54 chr2 177287335 177287703 -75968880 - THE1B LTR MaLR 0 364 1 2027 211 102 64 chr2 177288019 177288272 -75968311 - L1MC5 LINE L1 -124 7837 7595 2108 110 17 3 chr2 177288272 177288572 -75968011 - AluSg SINE Alu -6 304 1 2027 211 102 64 chr2 177288572 177289196 -75967387 - L1MC5 LINE L1 -366 7595 6926 1738 122 19 71 chr2 177289300 177289611 -75966972 - AluJo SINE Alu -11 301 7 2174 176 0 6 chr2 177289946 177290299 -75966284 + Tigger7 DNA MER2_type 1 351 -199 260 83 0 0 chr2 177290299 177290335 -75966248 + MER72 LTR ERV1 2 37 -685 2079 218 68 2 chr2 177290531 177290985 -75965598 + MER72 LTR ERV1 239 722 0 1357 159 9 4 chr2 177290985 177291206 -75965377 + Tigger7 DNA MER2_type 348 569 -1918 524 80 280 0 chr2 177291201 177291323 -75965260 + Tigger7 DNA MER2_type 2329 2485 -102 2299 131 29 79 chr2 177291323 177291766 -75964817 - Tigger2a DNA MER2_type 0 434 14 498 144 10 62 chr2 177291766 177291863 -75964720 + Tigger7 DNA MER2_type 2495 2586 -1 2072 152 27 6 chr2 177293183 177293519 -75963064 + MER2 DNA MER2_type 2 344 0 2186 112 3 6 chr2 177293639 177293951 -75962632 - AluSq SINE Alu -2 311 1 309 300 25 40 chr2 177294126 177294377 -75962206 + L2 LINE L2 1997 2305 -1009 3852 141 42 22 chr2 177294584 177295306 -75961277 + L1MA9 LINE L1 5573 6308 -4 432 308 149 55 chr2 177295314 177295383 -75961200 - L2 LINE L2 -614 2700 2639 3099 149 40 20 chr2 177295383 177295934 -75960649 + MER68 LTR ERV1 1 562 0 432 308 149 55 chr2 177295934 177296131 -75960452 - L2 LINE L2 -675 2639 2401 219 333 73 41 chr2 177296131 177296254 -75960329 + MIR SINE MIR 3 129 -133 234 255 39 0 chr2 177296347 177296398 -75960185 - MIR SINE MIR -12 250 198 852 203 54 45 chr2 177296424 177296590 -75959993 - AluJb SINE Alu -2 310 140 2209 97 0 7 chr2 177296590 177296888 -75959695 - AluSg SINE Alu -14 296 1 852 203 54 45 chr2 177296888 177296943 -75959640 - AluJb SINE Alu -172 140 87 192 299 91 0 chr2 177297129 177297206 -75959377 - MIR SINE MIR -85 123 40 1540 152 3 87 chr2 177297336 177297646 -75958937 + AluJo SINE Alu 16 299 -13 745 142 0 0 chr2 177298302 177298422 -75958161 - AluSg/x SINE Alu 0 310 191 24 0 0 0 chr2 177298637 177298661 -75957922 + AT_rich Low_complexity Low_complexity 1 24 0 31 58 0 0 chr2 177299098 177299150 -75957433 + AT_rich Low_complexity Low_complexity 1 52 0 384 196 103 0 chr2 177299181 177299288 -75957295 - L1MC4a LINE L1 -1877 5931 5814 5334 157 35 22 chr2 177299311 177300778 -75955805 - L1MA4 LINE L1 -11 7310 5813 2275 90 0 7 chr2 177300778 177301079 -75955504 - AluY SINE Alu -12 299 1 5334 157 35 22 chr2 177301079 177301557 -75955026 - L1MA4 LINE L1 -1508 5813 5342 7646 21 0 0 chr2 177301557 177302962 -75953621 - L1PA3 LINE L1 0 6155 4749 14712 35 1 1 chr2 177302962 177304755 -75951828 + L1PA3 LINE L1 2955 4748 -1398 9791 190 43 48 chr2 177304750 177306131 -75950452 - L1MA4 LINE L1 -1811 5356 3969 * 1732 159 42 0 chr2 177306131 177306420 -75950163 + AluJb SINE Alu 1 301 -11 9791 190 43 48 chr2 177306420 177306899 -75949684 - L1MA4 LINE L1 -3198 3969 3489 523 185 0 137 chr2 177306899 177307045 -75949538 + FLAM_A SINE Alu 2 127 -6 9791 190 43 48 chr2 177307045 177307117 -75949466 - L1MA4 LINE L1 -3678 3489 3418 198 0 0 0 chr2 177307117 177307139 -75949444 + (TA)n Simple_repeat Simple_repeat 2 23 0 9791 190 43 48 chr2 177307139 177308485 -75948098 - L1MA4 LINE L1 -3749 3418 2038 2063 228 25 64 chr2 177308507 177309073 -75947510 - MLT2B3 LTR ERVL -8 546 3 6268 182 50 0 chr2 177309073 177310194 -75946389 - L1MA4 LINE L1 -5139 2029 853 * 6913 184 145 94 chr2 177310188 177311851 -75944732 + L1MD3 LINE L1 5182 7031 -964 985 147 31 16 chr2 177311851 177312042 -75944541 - L1PA7 LINE L1 0 6154 5961 6913 184 145 94 chr2 177312042 177313054 -75943529 + L1MD3 LINE L1 7031 7990 -5 26 64 0 0 chr2 177313313 177313360 -75943223 + AT_rich Low_complexity Low_complexity 1 47 0 30 59 0 0 chr2 177313575 177313626 -75942957 + AT_rich Low_complexity Low_complexity 1 51 0 22 35 0 0 chr2 177313652 177313681 -75942902 + AT_rich Low_complexity Low_complexity 1 29 0 534 264 75 95 chr2 177313998 177314347 -75942236 - MLT1H LTR MaLR 0 549 208 864 185 35 114 chr2 177314386 177314485 -75942098 - MLT1H LTR MaLR -305 244 139 2112 128 0 16 chr2 177314485 177314790 -75941793 - AluSx SINE Alu -8 304 5 864 185 35 114 chr2 177314790 177314944 -75941639 - MLT1H LTR MaLR -410 139 11 644 228 42 11 chr2 177315581 177315770 -75940813 - L1ME3A LINE L1 -98 6072 5878 2323 93 3 7 chr2 177316452 177316762 -75939821 - AluSq SINE Alu -4 309 1 207 0 0 0 chr2 177316879 177316902 -75939681 + (TTTTTG)n Simple_repeat Simple_repeat 4 26 0 183 279 47 23 chr2 177317149 177317235 -75939348 + MIR SINE MIR 53 140 -68 2214 109 3 16 chr2 177318338 177318651 -75937932 + AluSx SINE Alu 1 309 -3 40 21 0 0 chr2 177318790 177318837 -75937746 + AT_rich Low_complexity Low_complexity 1 47 0 352 226 216 0 chr2 177319474 177319576 -75937007 - L2 LINE L2 0 3313 3190 1767 167 37 10 chr2 177319754 177320053 -75936530 + AluJo SINE Alu 2 308 -4 697 216 122 74 chr2 177320266 177321331 -75935252 - L1MC5 LINE L1 -86 7875 6638 2955 211 90 35 chr2 177321819 177321947 -75934636 + L1M4c LINE L1 2071 2191 -4191 297 0 0 0 chr2 177321947 177321980 -75934603 + (CA)n Simple_repeat Simple_repeat 2 34 0 2955 211 90 35 chr2 177321980 177322821 -75933762 + L1M4c LINE L1 2191 3117 -3265 2295 94 0 0 chr2 177322821 177323109 -75933474 - AluY SINE Alu -23 288 1 2955 211 90 35 chr2 177323109 177323271 -75933312 + L1M4c LINE L1 3117 3269 -3113 1734 211 60 35 chr2 177323265 177323781 -75932802 + L1M4c LINE L1 3500 4028 -2354 * 254 275 0 0 chr2 177323913 177323982 -75932601 - L1MC4 LINE L1 -170 7872 7804 1922 164 0 0 chr2 177324002 177324288 -75932295 - AluSx SINE Alu -26 286 1 247 288 85 8 chr2 177324288 177324406 -75932177 - L1MC4 LINE L1 -224 7818 7692 556 134 17 67 chr2 177324412 177324531 -75932052 - L1MA7 LINE L1 -7 6284 6172 921 270 80 24 chr2 177324588 177324925 -75931658 - L1MC4 LINE L1 -335 7707 7352 730 256 147 11 chr2 177325013 177325298 -75931285 - L1MC4 LINE L1 -1015 7027 6704 4581 161 19 43 chr2 177325934 177326820 -75929763 + MER6 DNA MER2_type 1 865 0 459 277 92 7 chr2 177327474 177327615 -75928968 + MIR3 SINE MIR 15 167 -41 2298 90 0 26 chr2 177327916 177328226 -75928357 - AluSc SINE Alu -7 302 1 1439 206 168 79 chr2 177328388 177329255 -75927328 - MER52A LTR ERV1 -3 1752 666 237 274 226 24 chr2 177330051 177330219 -75926364 + MIR SINE MIR 20 221 -41 21 0 0 0 chr2 177330716 177330737 -75925846 + AT_rich Low_complexity Low_complexity 1 21 0 2428 75 3 22 chr2 177331069 177331388 -75925195 + AluSp SINE Alu 1 313 0 490 342 128 42 chr2 177331522 177332163 -75924420 - L2 LINE L2 -631 2683 1988 2276 94 0 52 chr2 177332841 177333169 -75923414 + AluSx SINE Alu 1 311 -1 644 161 0 0 chr2 177334072 177334184 -75922399 - FRAM SINE Alu -3 173 62 324 358 117 28 chr2 177334270 177334622 -75921961 + L2 LINE L2 2469 2851 -463 443 341 36 0 chr2 177334693 177334831 -75921752 - L2 LINE L2 -4 3268 3126 2388 71 3 0 chr2 177334870 177335167 -75921416 - AluY SINE Alu -13 298 1 260 400 84 16 chr2 177335208 177335398 -75921185 - L2 LINE L2 -460 2854 2652 2273 119 0 3 chr2 177335856 177336167 -75920416 + AluSq SINE Alu 1 310 -3 2369 82 0 3 chr2 177336170 177336473 -75920110 + AluY SINE Alu 1 302 -9 344 327 243 16 chr2 177336486 177337277 -75919306 - L2 LINE L2 -2004 1310 341 183 355 73 36 chr2 177337320 177337430 -75919153 + L2 LINE L2 2939 3052 -220 285 263 0 0 chr2 177337522 177337579 -75919004 + L2 LINE L2 3208 3264 -8 1217 93 0 0 chr2 177338703 177338854 -75917729 + AluSq/x SINE Alu 1 151 -162 1647 153 0 0 chr2 177338854 177339102 -75917481 + AluSx SINE Alu 46 293 -19 186 43 0 0 chr2 177339139 177339162 -75917421 + (TG)n Simple_repeat Simple_repeat 2 24 0 32 26 0 0 chr2 177340217 177340256 -75916327 + AT_rich Low_complexity Low_complexity 1 39 0 260 219 61 49 chr2 177340953 177341035 -75915548 - MIR SINE MIR -85 123 41 1633 187 6 32 chr2 177342110 177342426 -75914157 + AluJb SINE Alu 1 308 -4 206 326 0 0 chr2 177343638 177343687 -75912896 - L2 LINE L2 -87 3185 3137 264 292 158 3 chr2 177343918 177344015 -75912568 - MIR SINE MIR -90 118 10 680 203 16 0 chr2 177344551 177344674 -75911909 + FLAM_A SINE Alu 1 125 -8 28 0 0 0 chr2 177344898 177344926 -75911657 + AT_rich Low_complexity Low_complexity 1 28 0 195 42 0 0 chr2 177345572 177345596 -75910987 + (T)n Simple_repeat Simple_repeat 1 24 0 516 16 0 0 chr2 177348750 177348811 -75907772 + (CA)n Simple_repeat Simple_repeat 2 62 0 501 287 80 0 chr2 177349117 177349267 -75907316 - MIR SINE MIR -67 195 34 197 0 0 67 chr2 177349462 177349492 -75907091 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 1500 191 3 10 chr2 177350629 177350922 -75905661 + AluJo SINE Alu 1 291 -21 1750 158 3 18 chr2 177351023 177351307 -75905276 - AluJo SINE Alu -30 282 3 327 244 39 0 chr2 177351697 177351775 -75904808 + MIR3 SINE MIR 85 165 -43 300 308 100 15 chr2 177352105 177352235 -75904348 - L3 LINE CR1 -1 1576 1436 2190 127 18 11 chr2 177352493 177352857 -75903726 - MLT1A1 LTR MaLR -2 455 1 28 29 0 0 chr2 177353920 177353955 -75902628 + AT_rich Low_complexity Low_complexity 1 35 0 812 181 0 0 chr2 177354367 177354500 -75902083 - FLAM_A SINE Alu 0 133 1 2020 99 31 24 chr2 177354640 177354806 -75901777 - AluSg SINE Alu -14 296 133 200 33 0 33 chr2 177354806 177354836 -75901747 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1994 97 56 0 chr2 177354836 177355104 -75901479 - AluSg SINE Alu -27 283 1 2020 99 31 24 chr2 177355104 177355229 -75901354 - AluSg SINE Alu -176 134 2 1885 117 0 0 chr2 177355345 177355611 -75900972 + AluY SINE Alu 45 310 -1 324 322 86 89 chr2 177356368 177356716 -75899867 - L2 LINE L2 -31 3241 2895 22 0 0 0 chr2 177357569 177357591 -75898992 + AT_rich Low_complexity Low_complexity 1 22 0 275 251 108 38 chr2 177357708 177357820 -75898763 - MIR SINE MIR -97 111 27 198 283 43 0 chr2 177358593 177358639 -75897944 + MIR SINE MIR 103 150 -58 323 207 126 54 chr2 177359140 177359251 -75897332 + MIR SINE MIR 119 237 -25 21 0 0 0 chr2 177359816 177359837 -75896746 + AT_rich Low_complexity Low_complexity 1 21 0 494 228 48 2 chr2 177361016 177361192 -75895391 - L1MC4 LINE L1 -744 7217 7070 2349 100 0 0 chr2 177361532 177361842 -75894741 - AluSg SINE Alu 0 310 1 397 294 50 25 chr2 177362397 177362557 -75894026 + MIR3 SINE MIR 45 208 0 1910 140 7 10 chr2 177362648 177362955 -75893628 - AluJb SINE Alu -6 306 1 464 214 0 20 chr2 177363510 177363608 -75892975 - MER2 DNA MER2_type -247 98 3 247 254 0 0 chr2 177363691 177363746 -75892837 + CT-rich Low_complexity Low_complexity 3 57 0 1970 155 7 0 chr2 177363986 177364352 -75892231 - AluJo SINE Alu 0 368 1 191 264 55 66 chr2 177365465 177365556 -75891027 - L2 LINE L2 -64 3208 3119 300 305 43 35 chr2 177366228 177366369 -75890214 - L1MC/D LINE L1 -2069 5739 5598 2124 118 0 0 chr2 177367011 177367299 -75889284 - AluSx SINE Alu -18 294 7 25 0 0 0 chr2 177368103 177368128 -75888455 + AT_rich Low_complexity Low_complexity 1 25 0 267 338 69 44 chr2 177368495 177368655 -75887928 - L2 LINE L2 -525 2789 2626 1102 179 17 98 chr2 177369017 177369251 -75887332 + Tigger7 DNA MER2_type 1 215 -490 360 296 91 67 chr2 177369279 177369729 -75886854 - L1ME LINE L1 -394 5768 5308 351 301 88 61 chr2 177369793 177369901 -75886682 - L1ME LINE L1 -960 5186 5082 342 58 0 0 chr2 177369901 177369953 -75886630 + L1MA3 LINE L1 6254 6305 0 351 301 88 61 chr2 177369953 177370319 -75886264 - L1ME LINE L1 -1064 5082 4699 225 108 0 0 chr2 177370325 177370362 -75886221 + (T)n Simple_repeat Simple_repeat 1 37 0 2236 103 10 0 chr2 177370375 177370676 -75885907 - AluSx SINE Alu -8 304 1 1732 113 4 23 chr2 177370845 177371102 -75885481 - AluSx SINE Alu -37 275 24 361 294 171 20 chr2 177371201 177371453 -75885130 - L1ME LINE L1 -1759 4387 4098 331 327 33 20 chr2 177371505 177371655 -75884928 - L1M4 LINE L1 -1737 4409 4258 736 281 30 59 chr2 177372131 177372218 -75884365 - MIR SINE MIR 0 262 174 2279 57 7 0 chr2 177372218 177372497 -75884086 + AluY SINE Alu 1 281 -30 261 0 0 0 chr2 177372500 177372529 -75884054 + (TAA)n Simple_repeat Simple_repeat 2 30 0 736 281 30 59 chr2 177372529 177372707 -75883876 - MIR SINE MIR -90 172 1 3206 216 89 78 chr2 177372836 177373304 -75883279 + L1ME1 LINE L1 2416 2877 -3269 1955 127 13 3 chr2 177373304 177373603 -75882980 - AluSq SINE Alu -11 302 1 3206 216 89 78 chr2 177373603 177373722 -75882861 + L1ME1 LINE L1 2877 2993 -3153 2152 112 3 7 chr2 177373722 177374016 -75882567 + AluSg SINE Alu 1 293 -17 3206 216 89 78 chr2 177374016 177374235 -75882348 + L1ME1 LINE L1 2993 3208 -2938 232 29 29 0 chr2 177374235 177374269 -75882314 - MER76 LTR ERV 0 688 654 3206 216 89 78 chr2 177374269 177374804 -75881779 + L1ME1 LINE L1 3208 3807 -2339 2587 102 87 23 chr2 177374836 177375318 -75881265 - L1MA9 LINE L1 -14 6298 5786 1059 154 60 25 chr2 177375318 177375519 -75881064 + MER2 DNA MER2_type 1 208 -137 25 31 0 0 chr2 177375519 177375551 -75881032 + AT_rich Low_complexity Low_complexity 1 32 0 536 121 12 0 chr2 177375604 177375687 -75880896 - L1MA9 LINE L1 -537 5775 5692 2189 205 67 15 chr2 177375687 177376288 -75880295 + L1ME1 LINE L1 3790 4421 -1725 642 206 0 0 chr2 177376263 177376389 -75880194 + L1MB7 LINE L1 6039 6164 -20 * 814 220 151 9 chr2 177376386 177377156 -75879427 + L1ME1 LINE L1 5221 6161 -5 284 284 326 0 chr2 177377327 177377422 -75879161 - L2 LINE L2 -14 3258 3133 5873 29 0 0 chr2 177377430 177378116 -75878467 + L1PA3 LINE L1 5467 6152 -3 324 327 158 12 chr2 177380220 177380474 -75876109 + L2 LINE L2 3023 3313 0 2155 116 0 0 chr2 177383135 177383420 -75873163 - AluSx SINE Alu -27 285 1 331 289 25 87 chr2 177383936 177384389 -75872194 - HERVL LTR ERVL -860 4794 4341 23 0 0 0 chr2 177386055 177386078 -75870505 + AT_rich Low_complexity Low_complexity 1 23 0 1707 128 26 33 chr2 177386445 177386749 -75869834 + AluJo SINE Alu 1 302 -10 2294 84 0 13 chr2 177386756 177387066 -75869517 + AluY SINE Alu 6 311 0 655 130 28 0 chr2 177387066 177387174 -75869409 + AluSq SINE Alu 125 235 -78 22 0 0 0 chr2 177387544 177387566 -75869017 + AT_rich Low_complexity Low_complexity 1 22 0 209 342 81 30 chr2 177390881 177391315 -75865268 - L2 LINE L2 -1890 1424 971 459 349 99 28 chr2 177391373 177392037 -75864546 - L2 LINE L2 0 3272 2538 519 354 97 43 chr2 177392078 177392499 -75864084 - L2 LINE L2 -22 3250 2807 509 171 182 123 chr2 177392615 177392707 -75863876 - MER58A DNA MER1_type -2196 224 139 243 0 0 0 chr2 177392707 177392734 -75863849 + (CA)n Simple_repeat Simple_repeat 2 28 0 509 171 182 123 chr2 177392734 177392811 -75863772 - MER58A DNA MER1_type -2281 139 45 396 353 168 15 chr2 177392993 177393457 -75863126 - L2 LINE L2 -932 2382 1848 356 271 120 22 chr2 177393657 177393882 -75862701 - MLT1L LTR MaLR 0 615 369 1698 207 121 66 chr2 177394295 177394793 -75861790 - MLT1F LTR MaLR 0 542 18 1891 248 70 18 chr2 177394805 177395444 -75861139 + L1MC4a LINE L1 6097 6242 0 283 247 99 58 chr2 177395420 177395735 -75860848 + HAL1b LINE L1 188 534 -814 * 843 314 87 25 chr2 177396155 177396834 -75859749 + L1MEc LINE L1 1062 1782 -4614 3934 171 85 24 chr2 177397030 177397083 -75859500 + L1MB7 LINE L1 5058 5106 -1078 3535 128 23 17 chr2 177397083 177397606 -75858977 + MER1A DNA MER1_type 1 526 -1 3934 171 85 24 chr2 177397606 177398599 -75857984 + L1MB7 LINE L1 5106 6168 -16 393 228 132 48 chr2 177398716 177398883 -75857700 + MIR SINE MIR 46 226 -36 343 219 107 22 chr2 177399292 177399502 -75857081 + L1MEc LINE L1 2122 2323 -3892 278 235 41 31 chr2 177399527 177399625 -75856958 + L1MEc LINE L1 4064 4162 -2053 21 89 0 0 chr2 177399786 177399842 -75856741 + AT_rich Low_complexity Low_complexity 1 56 0 357 280 140 0 chr2 177399881 177400088 -75856495 + L1MEc LINE L1 4497 4732 -1483 2312 104 3 0 chr2 177400093 177400402 -75856181 + AluSg SINE Alu 1 310 0 26 0 0 0 chr2 177400402 177400428 -75856155 + AT_rich Low_complexity Low_complexity 1 26 0 293 203 3 0 chr2 177400521 177400577 -75856006 + AluSp SINE Alu 136 181 -122 823 200 5 74 chr2 177400577 177400792 -75855791 + AluJo SINE Alu 23 222 -90 193 203 62 0 chr2 177400919 177400983 -75855600 + CT-rich Low_complexity Low_complexity 1 68 0 461 304 3 16 chr2 177401016 177401340 -75855243 + C-rich Low_complexity Low_complexity 1 319 0 243 0 0 0 chr2 177401540 177401567 -75855016 + (TA)n Simple_repeat Simple_repeat 1 27 0 297 182 3 0 chr2 177401660 177401716 -75854867 + AluSp SINE Alu 136 181 -122 1376 163 10 66 chr2 177401716 177401991 -75854592 + AluJo SINE Alu 23 312 0 224 89 0 22 chr2 177401991 177402036 -75854547 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 773 117 51 36 chr2 177402036 177402173 -75854410 + L1PA16 LINE L1 6028 6166 0 1376 163 10 66 chr2 177402173 177402185 -75854398 + AluJo SINE Alu 284 295 -17 334 302 153 16 chr2 177402191 177402441 -75854142 + L1MEc LINE L1 4831 5114 -1101 1027 269 137 19 chr2 177402441 177402805 -75853778 + MLT1I LTR MaLR 1 407 -2 222 37 0 0 chr2 177403940 177403967 -75852616 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 2043 126 0 0 chr2 177403982 177404253 -75852330 - AluSx SINE Alu -39 273 3 26 50 0 0 chr2 177404384 177404424 -75852159 + AT_rich Low_complexity Low_complexity 1 40 0 212 180 49 0 chr2 177405137 177405198 -75851385 + (TATAA)n Simple_repeat Simple_repeat 1 64 0 355 202 78 62 chr2 177405376 177405505 -75851078 + L1MD2 LINE L1 6026 6156 -203 * 642 135 99 35 chr2 177405492 177405633 -75850950 + L1MD3 LINE L1 7836 7985 -10 2089 103 41 0 chr2 177405974 177406265 -75850318 + AluSp SINE Alu 1 303 -10 245 269 64 64 chr2 177406647 177406788 -75849795 - L2 LINE L2 -18 3295 3155 243 0 0 0 chr2 177407027 177407057 -75849526 - L1MA3 LINE L1 -5 6300 6271 477 273 16 0 chr2 177407115 177407236 -75849347 + MIR SINE MIR 78 200 -62 277 240 56 20 chr2 177407423 177407576 -75849007 + L1P5 LINE L1 5306 5452 -702 351 293 68 20 chr2 177407585 177407732 -75848851 + L1ME LINE L1 5582 5735 -435 22 35 0 0 chr2 177408410 177408439 -75848144 + AT_rich Low_complexity Low_complexity 1 29 0 305 191 79 0 chr2 177408821 177408884 -75847699 - L1ME3A LINE L1 -176 5994 5927 5405 232 134 37 chr2 177408969 177409548 -75847035 - L1MDa LINE L1 -1756 4784 4262 3387 83 43 0 chr2 177409548 177409991 -75846592 - L1PA10 LINE L1 0 6168 5707 5405 232 134 37 chr2 177409991 177411505 -75845078 - L1MDa LINE L1 -2278 4262 2484 785 211 14 0 chr2 177411521 177411668 -75844915 + MLT1E1 LTR MaLR 505 653 -1 324 257 0 14 chr2 177411673 177411743 -75844840 + MLT1F LTR MaLR 70 138 -404 333 118 0 0 chr2 177411749 177411800 -75844783 + (TG)n Simple_repeat Simple_repeat 2 52 0 511 135 0 0 chr2 177411801 177411875 -75844708 - FLAM SINE Alu -21 122 49 1382 199 16 32 chr2 177411912 177412223 -75844360 + MLT1F LTR MaLR 237 542 0 774 300 77 25 chr2 177412239 177412592 -75843991 - L2 LINE L2 -54 3259 2889 606 156 214 7 chr2 177412647 177412801 -75843782 + MER53 DNA DNA 1 186 -3 237 361 21 0 chr2 177413040 177413137 -75843446 + MIR3 SINE MIR 107 205 -3 * 413 264 94 47 chr2 177413118 177413330 -75843253 + L3b LINE CR1 1245 1466 -117 238 260 0 0 chr2 177413423 177413473 -75843110 + MER5A DNA MER1_type 137 186 -3 502 211 79 0 chr2 177415242 177415356 -75841227 - MIR SINE MIR -86 176 54 373 274 70 38 chr2 177416286 177416443 -75840140 - MER5A DNA MER1_type -11 178 17 291 272 158 19 chr2 177416463 177416621 -75839962 + L2 LINE L2 3093 3272 0 2500 64 0 0 chr2 177417022 177417318 -75839265 - AluY SINE Alu -15 296 1 563 298 95 29 chr2 177417724 177417966 -75838617 - MIR SINE MIR 0 262 5 757 189 100 80 chr2 177418431 177418680 -75837903 - L1MC4 LINE L1 0 8042 7789 2494 171 91 17 chr2 177418685 177419159 -75837424 + LTR22 LTR ERVK 1 509 0 53494 76 9 4 chr2 177419159 177425964 -75830619 + HERVK22 LTR ERVK 1 6837 0 2499 188 55 16 chr2 177425964 177426454 -75830129 + LTR22 LTR ERVK 1 509 0 365 312 13 6 chr2 177426455 177426612 -75829971 - L1MC4 LINE L1 -279 7763 7606 473 176 33 11 chr2 177426681 177426772 -75829811 - U6 snRNA snRNA -14 93 1 503 246 121 80 chr2 177426797 177427061 -75829522 - L1MC4a LINE L1 -357 7451 7177 681 142 0 0 chr2 177428016 177428129 -75828454 + (TCCA)n Simple_repeat Simple_repeat 4 116 0 264 213 24 150 chr2 177428139 177428266 -75828317 - L2 LINE L2 0 3313 3203 180 106 21 43 chr2 177430652 177430699 -75825884 + (TG)n Simple_repeat Simple_repeat 1 46 0 279 254 30 60 chr2 177430885 177431019 -75825564 - MIR SINE MIR 0 262 133 651 266 91 0 chr2 177431305 177431504 -75825079 - MIR SINE MIR -15 247 31 546 154 43 0 chr2 177431526 177431643 -75824940 - MER69 DNA AcHobo -46 2480 2359 1873 292 54 27 chr2 177431646 177432280 -75824303 + L1MEc LINE L1 364 1014 -5707 * 12750 111 9 54 chr2 177432278 177435120 -75821463 + L1P3 LINE L1 11 2841 -3620 258 272 21 5 chr2 177435141 177435342 -75821241 + C-rich Low_complexity Low_complexity 1 204 0 219 36 0 0 chr2 177435543 177435571 -75821012 + (TCTCCC)n Simple_repeat Simple_repeat 4 31 0 8729 20 2 283 chr2 177435571 177437426 -75819157 + SVA Other Other 54 1386 0 26 30 0 0 chr2 177437426 177437459 -75819124 + AT_rich Low_complexity Low_complexity 1 33 0 365 178 14 14 chr2 177437660 177437733 -75818850 + LTR16C LTR ERVL 375 447 -44 186 43 0 0 chr2 177437733 177437756 -75818827 + (A)n Simple_repeat Simple_repeat 1 23 0 348 261 43 0 chr2 177437891 177437983 -75818600 - MLT1J2 LTR MaLR -294 156 61 22 0 0 0 chr2 177439235 177439257 -75817326 + AT_rich Low_complexity Low_complexity 1 22 0 216 268 0 0 chr2 177439438 177439494 -75817089 + (CATTT)n Simple_repeat Simple_repeat 3 58 0 408 178 47 115 chr2 177439564 177439871 -75816712 + L1MEc LINE L1 2335 2650 -3890 983 216 48 81 chr2 177440143 177440416 -75816167 - MLT1E LTR MaLR -16 577 314 1972 241 60 7 chr2 177440423 177441004 -75815579 + L1MEc LINE L1 3769 4380 -2160 1687 184 0 24 chr2 177441019 177441313 -75815270 - AluJo SINE Alu -25 287 1 724 257 28 0 chr2 177442661 177442840 -75813743 + MIR SINE MIR 11 194 -68 22627 77 6 3 chr2 177442943 177446643 -75809940 + L1PA7 LINE L1 2445 6154 0 824 243 102 23 chr2 177446683 177446988 -75809595 + L1MEc LINE L1 783 1111 -5285 * 2584 147 15 38 chr2 177446968 177447622 -75808961 + L1MA4 LINE L1 1795 2440 -4728 * 13435 152 34 14 chr2 177447605 177448009 -75808574 + L1MA4 LINE L1 3772 4167 -3154 5190 65 2 12 chr2 177448009 177448639 -75807944 + L1PA6 LINE L1 5514 6148 -6 13435 152 34 14 chr2 177448639 177450082 -75806501 + L1MA4 LINE L1 4167 5580 -1741 2589 47 0 0 chr2 177450082 177450380 -75806203 - AluY SINE Alu -13 298 1 13435 152 34 14 chr2 177450380 177452014 -75804569 + L1MA4 LINE L1 5580 7316 -5 366 258 108 21 chr2 177452043 177452283 -75804300 + L1M2a LINE L1 3441 3701 -3466 992 281 140 4 chr2 177452462 177452998 -75803585 - L2 LINE L2 -19 3294 2690 1480 209 51 54 chr2 177453039 177453472 -75803111 + MLT1C LTR MaLR 22 453 -14 614 279 80 5 chr2 177453493 177453694 -75802889 - L2 LINE L2 -626 2688 2473 287 219 281 0 chr2 177453776 177453904 -75802679 + LTR50 LTR ERVL 85 248 -547 703 231 201 7 chr2 177453953 177454247 -75802336 + LTR50 LTR ERVL 445 795 0 443 221 149 50 chr2 177454273 177454454 -75802129 - L2 LINE L2 -872 2442 2244 25 0 0 0 chr2 177457140 177457165 -75799418 + AT_rich Low_complexity Low_complexity 1 25 0 246 280 11 21 chr2 177457426 177457519 -75799064 + CT-rich Low_complexity Low_complexity 2 93 0 310 287 69 64 chr2 177457543 177457731 -75798852 + L1ME4a LINE L1 5926 6114 -7 760 200 40 0 chr2 177460195 177460370 -75796213 + L1M2a LINE L1 3806 3987 -3180 512 244 22 63 chr2 177460377 177460574 -75796009 + L1MA10 LINE L1 5991 6334 0 2034 112 10 7 chr2 177460594 177460889 -75795694 + AluSx SINE Alu 1 296 -16 632 220 142 0 chr2 177460890 177461108 -75795475 - MER69 DNA AcHobo -159 2367 2119 317 353 73 0 chr2 177461116 177461266 -75795317 - MER69 DNA AcHobo -1598 928 768 852 176 15 0 chr2 177461378 177461509 -75795074 - FLAM_A SINE Alu 0 133 1 761 272 88 0 chr2 177461593 177461832 -75794751 + Charlie8 DNA MER1_type 1 260 -2157 347 311 45 8 chr2 177462011 177462143 -75794440 + MIR SINE MIR 60 196 -66 875 254 93 38 chr2 177462210 177462652 -75793931 - MLT1H LTR MaLR -2 577 1 1287 191 42 0 chr2 177462814 177463029 -75793554 - MER58A DNA MER1_type 0 224 1 1760 120 34 8 chr2 177463265 177463532 -75793051 + AluSx SINE Alu 1 274 -38 266 274 0 0 chr2 177513548 177513610 -75742973 + MIR SINE MIR 201 262 0 199 296 99 37 chr2 177513602 177513680 -75742903 + MIR SINE MIR 68 150 -58 234 250 0 0 chr2 177513680 177513728 -75742855 + MER5A DNA MER1_type 4 51 -138 272 302 0 0 chr2 177514338 177514401 -75742182 + L2 LINE L2 3206 3268 -4 191 281 141 23 chr2 177515198 177515326 -75741257 + L2 LINE L2 1890 2032 -1282 342 243 189 0 chr2 177516120 177516231 -75740352 + MIR SINE MIR 100 231 -31 360 217 183 50 chr2 177516407 177516527 -75740056 - MIR SINE MIR -107 155 20 773 256 118 5 chr2 177516838 177517049 -75739534 + MIR SINE MIR 4 238 -24 2277 104 3 0 chr2 177517443 177517741 -75738842 - AluSq SINE Alu -14 299 1 320 346 15 8 chr2 177517791 177517921 -75738662 + L2 LINE L2 3179 3309 -4 293 283 92 0 chr2 177518586 177518706 -75737877 - L3b LINE CR1 -338 1245 1115 240 35 0 0 chr2 177518886 177518915 -75737668 + (TG)n Simple_repeat Simple_repeat 2 30 0 675 274 148 28 chr2 177519115 177519574 -75737009 + MLT1K LTR MaLR 11 524 -64 180 0 0 0 chr2 177519576 177519596 -75736987 + (A)n Simple_repeat Simple_repeat 1 20 0 221 167 42 0 chr2 177519651 177519699 -75736884 - MIR SINE MIR -64 144 95 * 279 280 57 134 chr2 177519694 177519835 -75736748 + L2 LINE L2 2615 2765 -548 2099 137 7 0 chr2 177519835 177520135 -75736448 - AluSx SINE Alu -10 302 1 279 280 57 134 chr2 177520135 177520382 -75736201 + L2 LINE L2 2765 2972 -341 322 252 90 36 chr2 177520470 177520581 -75736002 - MIR SINE MIR -76 132 16 539 237 17 0 chr2 177520971 177521089 -75735494 + MER5B DNA MER1_type 59 178 0 321 208 0 0 chr2 177521291 177521363 -75735220 + (TA)n Simple_repeat Simple_repeat 1 72 0 2263 109 3 6 chr2 177521986 177522297 -75734286 - AluSx SINE Alu -2 310 1 317 333 9 9 chr2 177522382 177522490 -75734093 + MLT1K LTR MaLR 97 204 -384 399 217 11 33 chr2 177523314 177523406 -75733177 - L2 LINE L2 -1 3271 3182 818 164 46 76 chr2 177523837 177524099 -75732484 + L1ME2 LINE L1 5624 5877 -287 496 147 11 32 chr2 177524099 177524194 -75732389 + FRAM SINE Alu 73 165 -11 607 274 112 17 chr2 177524198 177524439 -75732144 + L1ME2 LINE L1 5901 6164 0 211 378 55 31 chr2 177524472 177524599 -75731984 + L2 LINE L2 3137 3266 -6 215 274 288 33 chr2 177524629 177524782 -75731801 - MIR SINE MIR -51 211 20 582 289 20 25 chr2 177525311 177525512 -75731071 - MIR SINE MIR -56 206 7 2080 174 113 22 chr2 177525557 177526018 -75730565 + MLT1D LTR MaLR 3 505 0 21 36 0 0 chr2 177526320 177526348 -75730235 + AT_rich Low_complexity Low_complexity 1 28 0 30 27 0 0 chr2 177526623 177526660 -75729923 + AT_rich Low_complexity Low_complexity 1 37 0 692 329 6 0 chr2 177527339 177527509 -75729074 - MER91A DNA MER1_type -23 173 3 249 285 114 41 chr2 177527768 177527891 -75728692 - L2 LINE L2 0 3272 3141 305 316 93 5 chr2 177528452 177528645 -75727938 + L1ME4a LINE L1 5590 5799 -322 417 130 130 30 chr2 177528998 177529129 -75727454 + L1ME4a LINE L1 5977 6120 -1 1642 166 40 27 chr2 177529415 177529711 -75726872 - AluJo SINE Alu -12 300 1 186 259 90 66 chr2 177530270 177530436 -75726147 + L2 LINE L2 2808 2977 -337 725 171 118 18 chr2 177530480 177530650 -75725933 + MER5A DNA MER1_type 1 187 -2 493 226 148 13 chr2 177530660 177530815 -75725768 + MER5B DNA MER1_type 1 176 -2 1705 143 0 26 chr2 177530957 177531229 -75725354 - AluJo SINE Alu -11 301 37 297 0 0 0 chr2 177531468 177531501 -75725082 + (TG)n Simple_repeat Simple_repeat 1 33 0 2292 102 0 3 chr2 177531839 177532143 -75724440 - AluSx SINE Alu -9 303 1 312 307 45 0 chr2 177532628 177532716 -75723867 - L2 LINE L2 -34 3238 3147 1364 170 18 0 chr2 177532770 177532993 -75723590 - AluJo SINE Alu -19 293 67 2294 115 0 0 chr2 177534535 177534840 -75721743 - AluSx SINE Alu -6 306 2 356 40 20 0 chr2 177535733 177535783 -75720800 + (CA)n Simple_repeat Simple_repeat 2 52 0 180 250 66 105 chr2 177536181 177536257 -75720326 - L3b LINE CR1 0 1583 1511 716 108 146 8 chr2 177536286 177536416 -75720167 + L1PA8 LINE L1 6016 6163 -9 255 231 19 0 chr2 177536472 177536524 -75720059 - L2 LINE L2 -213 3059 3007 1834 152 81 47 chr2 177536597 177536979 -75719604 + MSTD LTR MaLR 2 396 0 28 0 0 0 chr2 177537781 177537809 -75718774 + AT_rich Low_complexity Low_complexity 1 28 0 226 245 0 0 chr2 177537956 177538009 -75718574 + (CATATA)n Simple_repeat Simple_repeat 2 54 0 265 253 49 93 chr2 177538030 177538299 -75718284 - L1MC4a LINE L1 -309 5812 5679 * 272 205 93 43 chr2 177538283 177538444 -75718139 - L1MC4a LINE L1 -1089 5057 4889 * 1554 194 47 49 chr2 177538436 177538925 -75717658 - L1MC4a LINE L1 -1796 4350 3863 448 277 141 19 chr2 177538949 177539205 -75717378 - L1MC/D LINE L1 -2150 5658 5372 831 306 103 45 chr2 177539332 177539796 -75716787 - L1MC/D LINE L1 -979 5167 4731 2066 129 13 0 chr2 177539796 177540105 -75716478 - AluSq SINE Alu 0 313 1 831 306 103 45 chr2 177540105 177540171 -75716412 - L1MC/D LINE L1 -1415 4731 4670 2095 120 3 3 chr2 177540171 177540462 -75716121 + AluSx SINE Alu 1 291 -21 831 306 103 45 chr2 177540462 177540757 -75715826 - L1MC/D LINE L1 -1476 4670 4294 23802 137 35 10 chr2 177541256 177544423 -75712160 - L1MA3 LINE L1 0 7724 4638 2057 139 13 0 chr2 177544423 177544725 -75711858 - AluSx SINE Alu -6 306 1 23802 137 35 10 chr2 177544725 177549114 -75707469 - L1MA3 LINE L1 -3086 4638 18 1326 304 120 30 chr2 177549289 177550396 -75706187 - L1MC/D LINE L1 -2506 3640 2434 218 286 18 0 chr2 177550431 177550487 -75706096 + L2 LINE L2 3250 3306 -7 855 233 126 71 chr2 177551108 177551421 -75705162 - HAL1b LINE L1 -532 816 477 1882 145 14 14 chr2 177551421 177551717 -75704866 + AluJb SINE Alu 3 298 -14 855 233 126 71 chr2 177551717 177551785 -75704798 - HAL1b LINE L1 -871 477 414 1647 219 63 75 chr2 177551842 177552331 -75704252 - MLT2B3 LTR ERVL 0 554 72 2498 159 74 7 chr2 177552331 177553067 -75703516 + LTR1B LTR ERV1 1 826 0 434 113 0 0 chr2 177553067 177553129 -75703454 - MLT2B3 LTR ERVL -391 62 1 1506 172 24 54 chr2 177553421 177553718 -75702865 + AluJb SINE Alu 1 288 -24 4431 130 39 30 chr2 177553844 177554565 -75702018 + LTR8A LTR ERV1 1 727 0 618 313 118 12 chr2 177557881 177558204 -75698379 - LTR16A LTR ERVL -6 444 88 357 258 32 11 chr2 177559673 177559766 -75696817 - MIR3 SINE MIR -54 154 60 217 176 59 50 chr2 177563068 177563187 -75693396 + (TATAG)n Simple_repeat Simple_repeat 1 120 0 257 296 40 131 chr2 177563343 177563640 -75692943 + L2 LINE L2 2916 3185 -87 27107 91 30 28 chr2 177564441 177569160 -75687423 - MER61C-int LTR ERV1 -103 5114 404 2291 93 3 0 chr2 177569160 177569460 -75687123 + AluSp SINE Alu 1 301 -12 27107 91 30 28 chr2 177569460 177569521 -75687062 - MER61C-int LTR ERV1 -4813 404 345 716 127 24 32 chr2 177569593 177569719 -75686864 - MER61C-int LTR ERV1 -5092 125 1 2079 162 39 19 chr2 177569719 177570132 -75686451 - MER61C LTR ERV1 0 434 14 2873 120 67 36 chr2 177570371 177570846 -75685737 - LTR2B LTR ERV1 0 490 1 27 0 0 0 chr2 177571296 177571323 -75685260 + AT_rich Low_complexity Low_complexity 1 27 0 397 255 87 47 chr2 177573535 177573684 -75682899 - MIR SINE MIR -50 212 58 1809 183 47 6 chr2 177574143 177574465 -75682118 + MER58B DNA MER1_type 7 341 0 325 235 82 0 chr2 177574788 177574873 -75681710 - MER91A DNA MER1_type -10 186 95 319 278 155 0 chr2 177574881 177574978 -75681605 - MER91A DNA MER1_type -25 171 60 207 271 57 29 chr2 177575347 177575417 -75681166 + L2 LINE L2 2685 2756 -558 389 323 104 79 chr2 177576136 177576560 -75680023 + L2 LINE L2 2819 3256 -16 2174 131 0 0 chr2 177576560 177576858 -75679725 + AluSx SINE Alu 1 298 -14 389 323 104 79 chr2 177576858 177576876 -75679707 + L2 LINE L2 3256 3272 0 2372 72 0 10 chr2 177577175 177577492 -75679091 + AluY SINE Alu 1 311 0 2430 75 3 0 chr2 177577547 177577853 -75678730 + AluY SINE Alu 1 307 -4 834 165 0 8 chr2 177578938 177579065 -75677518 - FLAM_A SINE Alu -7 126 1 2186 200 32 26 chr2 177579529 177579993 -75676590 - MLT1C LTR MaLR 0 467 1 188 343 71 10 chr2 177580656 177580755 -75675828 - MIR SINE MIR -66 142 38 470 310 32 21 chr2 177581342 177581529 -75675054 - MIR SINE MIR -12 250 62 209 268 13 6 chr2 177581516 177581601 -75674982 - MIR SINE MIR -17 191 105 * 697 299 44 16 chr2 177582318 177582569 -75674014 - MIR SINE MIR 0 262 5 300 313 10 40 chr2 177582862 177582961 -75673622 + MIR SINE MIR 20 115 -147 199 205 51 115 chr2 177583114 177583192 -75673391 + MIR3 SINE MIR 108 180 -28 1871 154 0 0 chr2 177584505 177584784 -75671799 - AluJb SINE Alu -33 279 1 478 268 7 42 chr2 177585432 177585574 -75671009 + MIR3 SINE MIR 42 178 -30 180 0 0 0 chr2 177586160 177586180 -75670403 + (A)n Simple_repeat Simple_repeat 1 20 0 2231 101 0 41 chr2 177587362 177587680 -75668903 - AluSg SINE Alu -5 305 1 373 261 7 43 chr2 177587847 177587985 -75668598 - L1ME4a LINE L1 -2 6119 5987 228 309 37 12 chr2 177588076 177588157 -75668426 - MIR SINE MIR -141 121 39 375 318 37 0 chr2 177589044 177589151 -75667432 - MIR3 SINE MIR -1 207 97 588 279 43 0 chr2 177589797 177589937 -75666646 + MIR SINE MIR 44 189 -73 195 268 71 0 chr2 177589959 177590015 -75666568 + L2 LINE L2 3246 3305 -8 253 290 14 0 chr2 177590651 177590720 -75665863 + L3b LINE CR1 1422 1491 -92 501 145 14 172 chr2 177591026 177591089 -75665494 - MLT1D LTR MaLR -2 503 432 2801 19 0 0 chr2 177591089 177591397 -75665186 + AluYa5 SINE Alu 1 308 -3 501 145 14 172 chr2 177591397 177591421 -75665162 - MLT1D LTR MaLR -73 432 444 1428 177 129 39 chr2 177591421 177591755 -75664828 - MLT1A1 LTR MaLR -1 364 1 501 145 14 172 chr2 177591755 177591811 -75664772 - MLT1D LTR MaLR -60 445 382 1531 251 121 19 chr2 177591816 177592287 -75664296 + L2 LINE L2 2305 2823 -491 180 0 0 0 chr2 177595202 177595222 -75661361 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 222 105 0 0 chr2 177595544 177595582 -75661001 + (TC)n Simple_repeat Simple_repeat 1 38 0 1367 228 97 35 chr2 177596990 177597424 -75659159 - MLT1C LTR MaLR 0 467 7 534 321 71 25 chr2 177597515 177597755 -75658828 - MIR SINE MIR 0 262 12 192 284 99 25 chr2 177597807 177597888 -75658695 - L2 LINE L2 -37 3235 3149 211 234 0 0 chr2 177598294 177598341 -75658242 + T-rich Low_complexity Low_complexity 1 47 0 1237 186 155 10 chr2 177600317 177600608 -75655975 - MLT1H LTR MaLR 0 549 217 609 288 75 24 chr2 177600652 177600864 -75655719 + MIR SINE MIR 32 254 -8 720 346 74 35 chr2 177601647 177602132 -75654451 + L3 LINE CR1 30 533 -1044 326 198 16 157 chr2 177602993 177603047 -75653536 - MER5B DNA MER1_type 0 178 149 475 75 32 96 chr2 177603047 177603141 -75653442 + L1PA3 LINE L1 6068 6155 0 326 198 16 157 chr2 177603141 177603207 -75653376 - MER5B DNA MER1_type -29 149 75 1434 157 75 105 chr2 177603540 177603729 -75652854 + MLT1B LTR MaLR 2 195 -195 342 0 0 0 chr2 177603729 177603767 -75652816 + (CA)n Simple_repeat Simple_repeat 2 39 0 1434 157 75 105 chr2 177603767 177603978 -75652605 + MLT1B LTR MaLR 195 390 0 2312 173 3 14 chr2 177604735 177605104 -75651479 - MLT1A1 LTR MaLR 0 365 1 2136 201 33 41 chr2 177605599 177606082 -75650501 - MLT1D LTR MaLR 0 505 27 2034 248 75 29 chr2 177606709 177607403 -75649180 + Charlie7 DNA MER1_type 35 760 -1852 350 130 19 0 chr2 177607523 177607577 -75649006 + Charlie7 DNA MER1_type 2558 2612 0 3647 144 84 13 chr2 177607615 177608332 -75648251 - LTR1B LTR ERV1 0 785 1 199 256 48 96 chr2 177608405 177608530 -75648053 - MIR SINE MIR -79 183 65 1556 196 186 15 chr2 177608600 177608993 -75647590 + MLT1C LTR MaLR 3 462 -5 23 0 0 0 chr2 177609618 177609641 -75646942 + AT_rich Low_complexity Low_complexity 1 23 0 3592 255 72 32 chr2 177609711 177611102 -75645481 - L2 LINE L2 0 3313 1857 1127 337 24 40 chr2 177611111 177611704 -75644879 + L1PA16 LINE L1 789 1371 -6203 401 276 13 55 chr2 177611729 177611946 -75644637 + L1PA16 LINE L1 2086 2306 -5268 11799 195 41 80 chr2 177612590 177616508 -75640075 + L1PA16 LINE L1 2203 6275 -1329 405 0 0 0 chr2 177616508 177616553 -75640030 + (CA)n Simple_repeat Simple_repeat 2 46 0 1808 139 133 10 chr2 177616554 177616759 -75639824 - MER7A DNA MER2_type -2693 345 90 1814 157 3 13 chr2 177616759 177617065 -75639518 - AluJb SINE Alu -9 303 1 1808 139 133 10 chr2 177617065 177617168 -75639415 - MER7A DNA MER2_type -2948 90 1 11799 195 41 80 chr2 177617168 177617181 -75639402 + L1PA16 LINE L1 6275 6287 -1317 675 147 0 70 chr2 177617181 177617207 -75639376 - L1MB5 LINE L1 -9 6165 6139 2180 91 0 10 chr2 177617207 177617504 -75639079 - AluY SINE Alu -17 294 1 675 147 0 70 chr2 177617504 177617620 -75638963 - L1MB5 LINE L1 -35 6139 6033 11799 195 41 80 chr2 177617620 177619456 -75637127 + L1PA16 LINE L1 6287 7603 -1 235 245 0 0 chr2 177619469 177619518 -75637065 - L2 LINE L2 -1428 1886 1838 376 214 84 46 chr2 177619605 177619736 -75636847 - L2 LINE L2 -1480 1834 1699 2349 93 3 7 chr2 177619742 177620052 -75636531 - AluSp SINE Alu -4 309 1 883 178 100 17 chr2 177620065 177620110 -75636473 + AluJo SINE Alu 78 118 -194 225 0 0 0 chr2 177620110 177620135 -75636448 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 883 178 100 17 chr2 177620135 177620269 -75636314 + AluJo SINE Alu 118 272 -40 228 268 37 0 chr2 177620623 177620705 -75635878 - LTR66 LTR ERVL -166 444 360 215 285 50 76 chr2 177621023 177621325 -75635258 - L2 LINE L2 -464 2850 2557 274 344 48 16 chr2 177622286 177622475 -75634108 - LTR67 LTR ERVL 0 557 363 227 317 30 30 chr2 177622632 177622733 -75633850 - LTR67 LTR ERVL -358 199 99 397 206 29 81 chr2 177623200 177623336 -75633247 - MER63 DNA MER1_type -81 755 1 2309 105 0 6 chr2 177623638 177623952 -75632631 + AluSx SINE Alu 1 312 0 777 298 110 31 chr2 177624487 177624711 -75631872 - L1ME4a LINE L1 -22 6099 5894 988 168 26 37 chr2 177624711 177624902 -75631681 + MER5A DNA MER1_type 1 189 0 777 298 110 31 chr2 177624902 177625284 -75631299 - L1ME4a LINE L1 -227 5894 5445 330 291 55 0 chr2 177625799 177625981 -75630602 - L1ME4a LINE L1 -747 5399 5208 1829 87 0 9 chr2 177626551 177626781 -75629802 - AluSq SINE Alu -85 228 1 467 338 75 4 chr2 177627452 177627692 -75628891 + MIR SINE MIR 3 259 -3 468 310 78 59 chr2 177628109 177628608 -75627975 - L2 LINE L2 -262 3010 2495 1198 259 92 0 chr2 177628608 177628890 -75627693 - MLT1E2 LTR MaLR 0 626 319 10250 56 1 0 chr2 177628991 177630285 -75626298 + L1P LINE L1 3146 4441 -1705 263 250 7 22 chr2 177630455 177630591 -75625992 + CT-rich Low_complexity Low_complexity 3 136 0 211 160 80 10 chr2 177630739 177630839 -75625744 + (CATCT)n Simple_repeat Simple_repeat 1 107 0 * 599 106 69 12 chr2 177630816 177630976 -75625607 + (CATTT)n Simple_repeat Simple_repeat 5 173 0 724 91 85 6 chr2 177630993 177631158 -75625425 + (CATTT)n Simple_repeat Simple_repeat 1 178 0 324 126 84 28 chr2 177631189 177631332 -75625251 + (CATCT)n Simple_repeat Simple_repeat 5 155 0 1308 188 64 21 chr2 177631422 177631759 -75624824 - AluJo SINE Alu 0 366 18 590 210 16 16 chr2 177631780 177631904 -75624679 - FLAM_A SINE Alu -9 124 1 221 219 0 0 chr2 177632194 177632235 -75624348 - L2 LINE L2 -10 3303 3263 263 336 147 0 chr2 177633153 177633269 -75623314 + MIR3 SINE MIR 32 164 -44 2282 100 3 3 chr2 177635048 177635348 -75621235 - AluSg SINE Alu -10 300 1 721 230 10 83 chr2 177635727 177635931 -75620652 - MER5A DNA MER1_type 0 189 1 2512 69 13 0 chr2 177636125 177636429 -75620154 - AluSp SINE Alu -5 308 1 490 345 84 22 chr2 177636467 177636788 -75619795 - L3 LINE CR1 -11 1566 1226 640 242 37 12 chr2 177636788 177636949 -75619634 - MER5A DNA MER1_type 0 189 25 313 292 10 10 chr2 177636969 177637065 -75619518 - L3 LINE CR1 -343 1234 1139 429 293 60 28 chr2 177637097 177637312 -75619271 + L2 LINE L2 3091 3312 -1 542 319 47 4 chr2 177637825 177638060 -75618523 + L1ME LINE L1 5377 5621 -543 257 50 0 25 chr2 177638104 177638144 -75618439 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1111 194 107 51 chr2 177638296 177638688 -75617895 - LTR37A LTR ERV1 0 426 13 302 305 106 13 chr2 177638930 177639080 -75617503 + MIR3 SINE MIR 19 181 -27 312 70 0 23 chr2 177639428 177639471 -75617112 - MLT2D LTR ERVL -6 408 367 287 145 14 0 chr2 177639471 177639540 -75617043 + (TG)n Simple_repeat Simple_repeat 2 71 0 692 114 53 35 chr2 177639550 177639664 -75616919 - MLT2D LTR ERVL -174 240 125 633 189 61 17 chr2 177639667 177639847 -75616736 - L1M4 LINE L1 -1597 4549 4362 2281 74 3 0 chr2 177639848 177640132 -75616451 - AluY SINE Alu -3 308 24 560 163 22 0 chr2 177640232 177640324 -75616259 + AluSg/x SINE Alu 185 278 -32 3915 174 34 11 chr2 177640324 177641050 -75615533 + L1MB1 LINE L1 5426 6168 0 846 238 144 60 chr2 177641217 177641718 -75614865 - MER39 LTR ERV1 -3 704 1 364 325 45 45 chr2 177641823 177642023 -75614560 + MIR SINE MIR 63 262 0 1212 229 89 68 chr2 177643388 177643846 -75612737 + MER110A LTR ERV1 1 468 0 1051 200 15 5 chr2 177644020 177644215 -75612368 + AluJ SINE Alu 1 197 -115 1660 160 100 32 chr2 177644219 177644673 -75611910 + LTR10A LTR ERV1 1 548 -61 708 125 0 0 chr2 177644688 177644784 -75611799 + AluJ SINE Alu 200 295 -17 643 168 16 40 chr2 177645104 177645229 -75611354 - Tigger3b DNA MER2_type 0 1231 1110 362 263 44 22 chr2 177645230 177645367 -75611216 + MER65A LTR ERV1 1 140 -305 225 274 72 94 chr2 177645453 177645730 -75610853 + MER65A LTR ERV1 175 445 0 * 5500 148 53 31 chr2 177645730 177645939 -75610644 - Tigger3b DNA MER2_type -1917 1111 908 189 74 0 0 chr2 177645939 177645966 -75610617 + (TGAG)n Simple_repeat Simple_repeat 1 27 0 5500 148 53 31 chr2 177645966 177646102 -75610481 - Tigger3b DNA MER2_type -2120 908 776 2391 71 3 3 chr2 177646102 177646398 -75610185 + AluY SINE Alu 1 296 -15 5500 148 53 31 chr2 177646398 177647138 -75609445 - Tigger3b DNA MER2_type -2252 776 1 2188 118 0 22 chr2 177648308 177648621 -75607962 + AluSg SINE Alu 1 306 -4 1029 204 73 36 chr2 177648800 177649020 -75607563 + MER8 DNA MER2_type 11 238 -1 1134 135 0 0 chr2 177649403 177649573 -75607010 + AluY SINE Alu 127 296 -15 932 163 0 0 chr2 177649575 177649716 -75606867 - FRAM SINE Alu -32 144 4 356 282 149 6 chr2 177649927 177650108 -75606475 - MIR SINE MIR -7 255 49 2110 119 27 0 chr2 177651280 177651575 -75605008 - AluSg SINE Alu -7 303 1 2244 102 10 0 chr2 177652033 177652326 -75604257 + AluSc SINE Alu 1 296 -13 836 196 106 43 chr2 177652582 177652629 -75603954 + MER33 DNA MER1_type 5 48 -2537 2442 99 0 3 chr2 177652629 177652942 -75603641 + AluSq SINE Alu 1 312 -1 836 196 106 43 chr2 177652942 177653149 -75603434 + MER33 DNA MER1_type 48 275 -49 2134 113 10 0 chr2 177653157 177653449 -75603134 + AluSx SINE Alu 2 296 -16 900 197 0 0 chr2 177653539 177653691 -75602892 + FRAM SINE Alu 1 146 -30 207 0 0 0 chr2 177653695 177653718 -75602865 + (CAA)n Simple_repeat Simple_repeat 2 24 0 318 250 83 31 chr2 177654828 177654924 -75601659 - L2 LINE L2 -25 3288 3188 180 354 63 13 chr2 177655109 177655188 -75601395 - L2 LINE L2 -37 3235 3153 2031 101 7 21 chr2 177655677 177656009 -75600574 - AluSg SINE Alu 0 328 1 919 157 3 24 chr2 177656332 177656652 -75599931 + MLT1B LTR MaLR 1 386 -4 2119 186 63 8 chr2 177657971 177658419 -75598164 + MLT1C LTR MaLR 1 467 0 700 286 149 68 chr2 177658486 177658802 -75597781 - L2 LINE L2 -6 3307 3018 2071 84 11 14 chr2 177658802 177659087 -75597496 + AluY SINE Alu 21 304 -7 700 286 149 68 chr2 177659087 177659362 -75597221 - L2 LINE L2 -295 3018 2674 2209 100 13 7 chr2 177659362 177659663 -75596920 - AluSx SINE Alu -9 303 1 700 286 149 68 chr2 177659663 177659748 -75596835 - L2 LINE L2 -639 2674 2597 1387 169 28 12 chr2 177659749 177659998 -75596585 - MLT1C LTR MaLR -212 255 3 371 330 16 32 chr2 177660024 177660209 -75596374 - L2 LINE L2 -1645 1669 1488 1070 240 71 49 chr2 177660309 177660676 -75595907 - L2 LINE L2 0 3313 2939 3574 225 39 12 chr2 177660676 177661417 -75595166 + L1M4 LINE L1 4000 4769 -1377 2105 121 7 3 chr2 177661417 177661707 -75594876 + AluSq SINE Alu 1 291 -22 3574 225 39 12 chr2 177661707 177661842 -75594741 + L1M4 LINE L1 4769 4899 -1247 796 88 0 0 chr2 177661844 177661946 -75594637 - AluSg/x SINE Alu -10 300 199 2024 197 21 17 chr2 177662048 177662324 -75594259 - L1 LINE L1 -847 5299 5026 2358 86 0 0 chr2 177662324 177662615 -75593968 - AluY SINE Alu -20 291 1 2024 197 21 17 chr2 177662615 177663223 -75593360 - L1 LINE L1 -1120 5026 4336 1154 130 0 12 chr2 177663223 177663415 -75593168 + AluSg/x SINE Alu 118 307 0 2562 50 7 0 chr2 177663434 177663735 -75592848 - AluSg SINE Alu -7 303 1 1408 178 28 68 chr2 177663739 177664035 -75592548 - L1 LINE L1 -1834 4312 4031 4747 99 9 14 chr2 177664035 177664673 -75591910 - MER41B LTR ERV1 0 635 1 1408 178 28 68 chr2 177664673 177664730 -75591853 - L1 LINE L1 -2115 4031 3973 1445 249 25 8 chr2 177664734 177665136 -75591447 - L1ME LINE L1 -486 5680 5272 7633 47 9 0 chr2 177665139 177666311 -75590272 - L1PA5 LINE L1 0 6154 4970 47 61 0 0 chr2 177666368 177666450 -75590133 + AT_rich Low_complexity Low_complexity 1 82 0 2296 164 95 138 chr2 177667593 177667976 -75588607 + MER82 DNA MER2_type 1 399 -254 2239 97 7 0 chr2 177667976 177668275 -75588308 - AluSp SINE Alu -12 301 1 1618 171 17 31 chr2 177668277 177668569 -75588014 - AluJo SINE Alu -20 292 5 2296 164 95 138 chr2 177668569 177668864 -75587719 + MER82 DNA MER2_type 400 653 0 1283 209 82 42 chr2 177669345 177669699 -75586884 - MER39 LTR ERV1 0 707 340 236 215 46 15 chr2 177669751 177669816 -75586767 - MER34 LTR ERV1 -410 132 66 4626 118 8 62 chr2 177670266 177670996 -75585587 - LTR8 LTR ERV1 0 691 1 25656 146 44 48 chr2 177670997 177672131 -75584452 - HUERS-P1 LTR ERV1 -1 6262 5125 2363 113 3 0 chr2 177672131 177672442 -75584141 + AluSp SINE Alu 1 312 -1 25656 146 44 48 chr2 177672442 177676045 -75580538 - HUERS-P1 LTR ERV1 -1138 5125 1509 396 0 0 0 chr2 177676045 177676089 -75580494 + (CA)n Simple_repeat Simple_repeat 2 45 0 204 40 0 0 chr2 177676089 177676114 -75580469 + (GA)n Simple_repeat Simple_repeat 1 25 0 25656 146 44 48 chr2 177676114 177677318 -75579265 - HUERS-P1 LTR ERV1 -4752 1511 1 4356 114 31 66 chr2 177677318 177678034 -75578549 - LTR8 LTR ERV1 0 691 1 594 281 61 8 chr2 177678038 177678284 -75578299 + MIR SINE MIR 2 260 -2 2212 190 98 44 chr2 177678590 177679201 -75577382 - LTR48B LTR ERV1 0 644 1 223 250 0 53 chr2 177679404 177679449 -75577134 - MIR SINE MIR -118 144 103 6803 124 44 54 chr2 177679449 177680394 -75576189 - Tigger3b DNA MER2_type -1797 1231 299 1910 142 10 3 chr2 177680394 177680689 -75575894 - AluSq SINE Alu -16 297 1 6803 124 44 54 chr2 177680689 177680986 -75575597 - Tigger3b DNA MER2_type -2729 299 1 223 250 0 53 chr2 177680986 177681016 -75575567 - MIR SINE MIR -159 103 73 1354 85 45 15 chr2 177681541 177681742 -75574841 - LTR12 LTR ERV1 -23 691 485 404 239 9 0 chr2 177681742 177681851 -75574732 - LTR30 LTR ERV1 -74 648 539 3652 176 76 52 chr2 177681851 177682834 -75573749 - pTR5 LTR ERV1 -418 2020 734 2487 79 0 0 chr2 177682840 177683143 -75573440 + AluSg SINE Alu 1 303 -7 23 0 0 0 chr2 177683471 177683494 -75573089 + AT_rich Low_complexity Low_complexity 1 23 0 2197 92 30 0 chr2 177683891 177684186 -75572397 + AluSp SINE Alu 1 304 -9 2326 103 3 0 chr2 177684192 177684492 -75572091 + AluSq SINE Alu 1 301 -12 180 194 28 0 chr2 177686692 177686728 -75569855 - MIR3 SINE MIR -9 199 163 2064 112 30 3 chr2 177686772 177687068 -75569515 + AluSx SINE Alu 1 304 -8 2429 146 54 54 chr2 177687522 177687570 -75569013 - MSTB LTR MaLR -2 424 377 2054 122 3 23 chr2 177687570 177687874 -75568709 - AluSx SINE Alu -14 298 1 2429 146 54 54 chr2 177687874 177688249 -75568334 - MSTB LTR MaLR -48 378 1 355 254 79 9 chr2 177688459 177688573 -75568010 - MARNA DNA Mariner -313 273 152 863 212 47 52 chr2 177689841 177690053 -75566530 - MIR SINE MIR -39 223 13 1918 103 92 0 chr2 177691580 177691851 -75564732 + AluSx SINE Alu 1 296 -16 4040 179 47 56 chr2 177692459 177692522 -75564061 - L1MB7 LINE L1 -9 6175 6113 2501 78 3 0 chr2 177692522 177692831 -75563752 + AluSp SINE Alu 1 310 -3 4040 179 47 56 chr2 177692831 177693746 -75562837 - L1MB7 LINE L1 -71 6113 5190 2130 128 3 0 chr2 177693746 177694051 -75562532 - AluSx SINE Alu -6 306 1 4040 179 47 56 chr2 177694051 177694410 -75562173 - L1MB7 LINE L1 -994 5190 4860 2409 80 3 3 chr2 177694410 177694709 -75561874 + AluSp SINE Alu 1 299 -14 4040 179 47 56 chr2 177694709 177694786 -75561797 - L1MB7 LINE L1 -1324 4860 4784 604 332 65 61 chr2 177694839 177695369 -75561214 + L2 LINE L2 2657 3186 -86 1716 176 4 0 chr2 177695369 177695699 -75560884 - AluJb SINE Alu 0 334 4 604 332 65 61 chr2 177695699 177695786 -75560797 + L2 LINE L2 3186 3271 -1 2458 86 0 13 chr2 177695832 177696147 -75560436 - AluY SINE Alu 0 311 1 960 254 146 60 chr2 177696650 177697102 -75559481 - MLT1K LTR MaLR 0 588 98 2290 107 0 19 chr2 177697156 177697475 -75559108 + AluSp SINE Alu 1 313 0 1764 172 3 17 chr2 177697959 177698256 -75558327 - AluJo SINE Alu -19 293 1 2204 143 42 89 chr2 177698502 177698754 -75557829 + LTR47A LTR ERVL 1 222 -230 4971 151 41 16 chr2 177698754 177699560 -75557023 - LTR1B LTR ERV1 0 826 1 2204 143 42 89 chr2 177699560 177699781 -75556802 + LTR47A LTR ERVL 222 452 0 444 330 84 66 chr2 177699901 177700234 -75556349 + L2 LINE L2 2932 3270 -2 613 285 93 71 chr2 177700237 177700296 -75556287 - MLT1L LTR MaLR -2 613 557 1090 203 22 36 chr2 177700296 177700518 -75556065 - MER20 DNA MER1_type 0 219 1 613 285 93 71 chr2 177700518 177700868 -75555715 - MLT1L LTR MaLR -58 557 195 351 0 0 0 chr2 177701225 177701264 -75555319 + (CA)n Simple_repeat Simple_repeat 2 40 0 430 111 0 0 chr2 177701266 177701329 -75555254 - Alu SINE Alu -7 304 242 253 243 54 27 chr2 177701460 177701534 -75555049 - Charlie8 DNA MER1_type -2339 78 3 203 313 0 0 chr2 177703849 177703913 -75552670 - L2 LINE L2 -74 3239 3176 2098 193 48 5 chr2 177703968 177704404 -75552179 + MLT1C LTR MaLR 10 464 -3 1060 219 9 22 chr2 177704583 177704811 -75551772 - MIR SINE MIR -26 236 12 217 291 29 48 chr2 177705971 177706074 -75550509 + MIR SINE MIR 119 219 -43 384 256 55 73 chr2 177706211 177706239 -75550344 + L1PA16 LINE L1 5666 5693 -473 2572 57 0 22 chr2 177706239 177706554 -75550029 + AluY SINE Alu 1 308 -3 384 256 55 73 chr2 177706554 177706744 -75549839 + L1PA16 LINE L1 5693 5880 -286 * 1748 163 28 53 chr2 177706561 177706917 -75549666 + L1ME1 LINE L1 5691 6037 -129 730 172 93 7 chr2 177706943 177707094 -75549489 - MLT1C LTR MaLR -294 173 10 200 297 31 0 chr2 177707146 177707210 -75549373 + L2 LINE L2 3171 3236 -77 2073 140 0 0 chr2 177708230 177708530 -75548053 - AluSx SINE Alu -12 300 1 633 286 55 28 chr2 177708639 177708856 -75547727 - MIR SINE MIR -12 250 28 2114 132 23 0 chr2 177709912 177710215 -75546368 + AluSx SINE Alu 1 310 -2 201 277 0 0 chr2 177711076 177711123 -75545460 + L2 LINE L2 3267 3313 0 325 351 0 0 chr2 177715253 177715367 -75541216 - MIR3 SINE MIR -4 204 91 524 226 17 0 chr2 177715384 177715499 -75541084 + MIR SINE MIR 29 145 -117 208 232 0 36 chr2 177716380 177716436 -75540147 + GA-rich Low_complexity Low_complexity 1 54 0 1352 199 96 34 chr2 177717013 177717535 -75539048 + LTR48 LTR ERV1 1 787 0 267 304 43 0 chr2 177717537 177717606 -75538977 + L2 LINE L2 3228 3299 -14 546 119 0 0 chr2 177717620 177717704 -75538879 + (GGAA)n Simple_repeat Simple_repeat 3 86 0 1279 104 0 0 chr2 177719634 177719807 -75536776 - AluSq SINE Alu -4 309 137 1083 221 41 73 chr2 177719808 177719974 -75536609 - MER39 LTR ERV1 -8 684 514 2358 74 0 7 chr2 177719974 177720271 -75536312 - AluY SINE Alu -16 295 1 1083 221 41 73 chr2 177720271 177720558 -75536025 - MER39 LTR ERV1 -178 514 68 251 184 20 0 chr2 177720550 177720599 -75535984 - MER34 LTR ERV1 -491 51 2 * 201 256 0 0 chr2 177720615 177720658 -75535925 + CT-rich Low_complexity Low_complexity 3 45 0 1606 164 65 11 chr2 177720680 177720955 -75535628 + AluJo SINE Alu 3 292 -20 251 83 67 0 chr2 177720955 177721015 -75535568 + (TA)n Simple_repeat Simple_repeat 1 64 0 199 203 170 56 chr2 177722572 177722674 -75533909 + MIR SINE MIR 34 132 -76 2126 151 0 0 chr2 177722848 177723160 -75533423 - AluSx SINE Alu 0 312 1 3074 188 45 13 chr2 177723485 177723843 -75532740 - MLT1F1 LTR MaLR 0 567 183 216 0 0 0 chr2 177723843 177723867 -75532716 + (TTGGGG)n Simple_repeat Simple_repeat 1 24 0 3074 188 45 13 chr2 177723867 177724057 -75532526 - MLT1F1 LTR MaLR -384 183 1 1254 256 54 6 chr2 177725198 177725534 -75531049 + L1MEc LINE L1 324 675 -5721 1908 124 8 4 chr2 177725536 177725802 -75530781 - AluSx SINE Alu -14 298 32 2085 214 53 50 chr2 177725803 177725881 -75530702 + L1MEc LINE L1 2762 2838 -3377 2330 65 17 0 chr2 177725881 177726171 -75530412 + AluY SINE Alu 1 295 -16 2085 214 53 50 chr2 177726171 177726774 -75529809 + L1MEc LINE L1 2838 3445 -2770 1809 217 32 40 chr2 177726764 177727262 -75529321 + L1MEc LINE L1 3930 4423 -1792 * 306 160 0 0 chr2 177727367 177727417 -75529166 - MER46C DNA MER2_type -288 50 1 186 319 156 7 chr2 177728657 177728798 -75527785 - L2 LINE L2 -2 3270 3109 215 336 78 26 chr2 177728950 177729066 -75527517 - L2 LINE L2 -17 3255 3134 1535 273 65 31 chr2 177729498 177729974 -75526609 + MLT1J LTR MaLR 10 501 -10 336 345 29 73 chr2 177730085 177730331 -75526252 - L2 LINE L2 -201 3071 2837 281 319 192 11 chr2 177731426 177731702 -75524881 + L2 LINE L2 2067 2392 -922 1118 223 60 32 chr2 177731763 177732046 -75524537 + MLT1E2 LTR MaLR 5 295 -331 1331 203 37 87 chr2 177732399 177732754 -75523829 + MER46C DNA MER2_type 1 337 -1 2914 120 7 44 chr2 177733530 177733980 -75522603 - Tigger2a DNA MER2_type 0 434 2 2147 136 0 3 chr2 177734542 177734850 -75521733 - AluSx SINE Alu -5 307 1 1671 199 75 25 chr2 177736375 177736852 -75519731 - MER39 LTR ERV1 0 707 1 456 247 65 43 chr2 177738428 177738589 -75517994 + MIR SINE MIR 43 212 -50 654 222 208 10 chr2 177738599 177738806 -75517777 - MIR SINE MIR 0 262 15 432 0 0 0 chr2 177738982 177739030 -75517553 + (CA)n Simple_repeat Simple_repeat 2 49 0 1610 171 38 11 chr2 177739108 177739395 -75517188 + AluJo SINE Alu 1 295 -17 537 266 102 0 chr2 177739685 177739813 -75516770 + MIR SINE MIR 13 153 -109 831 256 93 112 chr2 177739831 177740137 -75516446 - MLT1J LTR MaLR -6 505 211 2086 118 0 0 chr2 177740137 177740417 -75516166 + AluSg SINE Alu 1 280 -30 831 256 93 112 chr2 177740417 177740617 -75515966 - MLT1J LTR MaLR -300 211 9 463 289 82 0 chr2 177741037 177741172 -75515411 + MER117 DNA MER1_type 3 148 -49 250 234 119 145 chr2 177741408 177741573 -75515010 - MIR SINE MIR 0 262 105 1978 143 20 0 chr2 177741573 177741873 -75514710 + AluSx SINE Alu 1 306 -6 250 234 119 145 chr2 177741873 177741976 -75514607 - MIR SINE MIR -157 105 1 1676 180 48 42 chr2 177741996 177742271 -75514312 - L1MB5 LINE L1 -9 6165 5893 652 190 86 0 chr2 177742271 177742387 -75514196 + FLAM_C SINE Alu 1 126 -7 1676 180 48 42 chr2 177742387 177742479 -75514104 - L1MB5 LINE L1 -281 5893 5797 2044 119 0 7 chr2 177742479 177742790 -75513793 - AluSx SINE Alu 0 309 1 1676 180 48 42 chr2 177742790 177742804 -75513779 - L1MB5 LINE L1 -377 5797 5785 238 268 0 0 chr2 177743291 177743347 -75513236 + L1MC/D LINE L1 5718 5773 -2035 222 62 0 0 chr2 177743500 177743532 -75513051 + (TC)n Simple_repeat Simple_repeat 2 33 0 297 0 0 0 chr2 177743534 177743567 -75513016 + (TG)n Simple_repeat Simple_repeat 2 34 0 293 289 60 66 chr2 177744042 177744208 -75512375 - L3b LINE CR1 -142 1441 1277 200 289 0 0 chr2 177744351 177744389 -75512194 + L2 LINE L2 3220 3257 -15 366 310 167 23 chr2 177744650 177744824 -75511759 + MIR SINE MIR 53 251 -11 335 320 26 13 chr2 177745013 177745169 -75511414 + MER117 DNA MER1_type 38 195 -2 2506 15 0 0 chr2 177745306 177745578 -75511005 + AluY SINE Alu 39 310 -1 209 198 50 174 chr2 177746154 177746275 -75510308 + MIR3 SINE MIR 89 194 -14 2436 103 47 36 chr2 177746318 177746499 -75510084 - THE1B LTR MaLR 0 364 186 2273 112 3 0 chr2 177746499 177746803 -75509780 + AluSx SINE Alu 1 305 -7 2436 103 47 36 chr2 177746803 177746981 -75509602 - THE1B LTR MaLR -178 186 1 1533 152 82 7 chr2 177747372 177747642 -75508941 - AluJb SINE Alu -21 291 2 3098 143 49 43 chr2 177748079 177748632 -75507951 - MER21A LTR ERV1 0 931 376 1217 126 131 5 chr2 177748637 177748851 -75507732 - MER21A LTR ERV1 -667 264 24 433 184 18 0 chr2 177748894 177749003 -75507580 + (TA)n Simple_repeat Simple_repeat 1 111 0 264 232 0 53 chr2 177749063 177749158 -75507425 - L1MC4 LINE L1 -1337 6705 6616 320 180 52 6 chr2 177749242 177749414 -75507169 + (TA)n Simple_repeat Simple_repeat 1 180 0 331 177 53 7 chr2 177749428 177749645 -75506938 + (TA)n Simple_repeat Simple_repeat 1 207 -414 2415 104 0 0 chr2 177749645 177749952 -75506631 - AluSx SINE Alu -5 307 1 331 177 53 7 chr2 177749952 177750022 -75506561 + (TA)n Simple_repeat Simple_repeat 207 621 0 339 25 0 0 chr2 177750028 177750068 -75506515 + (TG)n Simple_repeat Simple_repeat 2 41 0 2366 119 0 0 chr2 177750082 177750394 -75506189 + AluSx SINE Alu 1 312 0 1653 141 16 4 chr2 177750572 177750828 -75505755 - AluJb SINE Alu -16 296 38 508 115 10 10 chr2 177751562 177751658 -75504925 + (GGAA)n Simple_repeat Simple_repeat 2 97 0 2309 105 0 6 chr2 177752502 177752816 -75503767 - AluSx SINE Alu 0 312 1 552 221 29 44 chr2 177753118 177753254 -75503329 + MER63 DNA MER1_type 1 760 -302 275 317 0 12 chr2 177753249 177753331 -75503252 + MER63 DNA MER1_type 980 1060 0 * 6023 130 12 10 chr2 177753396 177754302 -75502281 + L1MC1 LINE L1 5423 6330 -3 192 77 0 0 chr2 177754783 177754809 -75501774 + (TTCTC)n Simple_repeat Simple_repeat 4 29 0 230 0 33 0 chr2 177756494 177756524 -75500059 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2404 61 3 3 chr2 177756527 177756824 -75499759 - AluY SINE Alu -14 297 1 2203 115 3 0 chr2 177756929 177757225 -75499358 - AluSq SINE Alu -16 297 1 1657 167 0 55 chr2 177757321 177757650 -75498933 - AluJo SINE Alu -1 311 1 1409 124 5 0 chr2 177757691 177757893 -75498690 + AluSg/x SINE Alu 102 304 -6 309 76 76 0 chr2 177757895 177757974 -75498609 + (TA)n Simple_repeat Simple_repeat 1 85 0 3483 144 66 30 chr2 177758245 177758434 -75498149 + L1MB8 LINE L1 5529 5710 -468 2437 75 3 0 chr2 177758434 177758740 -75497843 + AluSp SINE Alu 1 307 -6 3483 144 66 30 chr2 177758740 177759173 -75497410 + L1MB8 LINE L1 5710 6173 -5 354 330 36 40 chr2 177759545 177759769 -75496814 - L2 LINE L2 -1239 2075 1853 261 357 117 45 chr2 177760214 177760522 -75496061 + L2 LINE L2 2943 3272 0 1158 180 57 116 chr2 177761173 177761561 -75495022 + MLT1A1 LTR MaLR 1 365 0 242 266 0 31 chr2 177761631 177761695 -75494888 + L2 LINE L2 3199 3260 -12 * 249 260 156 0 chr2 177761670 177761747 -75494836 - MIR SINE MIR -6 256 168 361 289 24 42 chr2 177764803 177764969 -75491614 + MER103 DNA DNA 4 166 0 233 285 49 49 chr2 177765758 177765881 -75490702 + MIR3 SINE MIR 82 204 -4 2779 124 43 22 chr2 177766348 177766793 -75489790 + LTR32 LTR ERVL 14 467 -4 1933 132 40 10 chr2 177766852 177767155 -75489428 - AluJo SINE Alu 0 312 1 459 0 0 0 chr2 177771187 177771238 -75485345 + (CA)n Simple_repeat Simple_repeat 2 52 0 221 216 0 0 chr2 177771446 177771483 -75485100 + polypyrimidine Low_complexity Low_complexity 1 37 0 2362 92 0 3 chr2 177771499 177771803 -75484780 + AluSg SINE Alu 1 303 -7 1830 129 25 74 chr2 177772383 177772708 -75483875 + AluJo SINE Alu 1 309 -3 382 205 404 0 chr2 177772738 177772889 -75483694 + MIR SINE MIR 44 255 -7 501 274 75 122 chr2 177773072 177773540 -75483043 - L2 LINE L2 0 3272 2827 202 228 88 0 chr2 177774592 177774649 -75481934 + MIR SINE MIR 189 250 -12 305 59 23 19 chr2 177775102 177775160 -75481423 - AluSp SINE Alu -133 170 120 390 275 143 18 chr2 177775185 177775411 -75481172 - L1MC4a LINE L1 -433 5926 5676 1722 163 14 0 chr2 177775823 177776100 -75480483 + AluJb SINE Alu 1 281 -31 300 53 18 35 chr2 177776105 177776162 -75480421 + (TA)n Simple_repeat Simple_repeat 2 57 0 2205 117 0 0 chr2 177776620 177776918 -75479665 - AluSg SINE Alu -12 298 1 31 0 0 0 chr2 177777681 177777712 -75478871 + AT_rich Low_complexity Low_complexity 1 31 0 813 181 18 144 chr2 177778431 177778515 -75478068 - LTR41 LTR ERVL 0 773 680 2431 82 3 13 chr2 177778515 177778831 -75477752 + AluSq SINE Alu 1 313 0 813 181 18 144 chr2 177778831 177779023 -75477560 - LTR41 LTR ERVL -93 680 532 630 236 31 6 chr2 177779213 177779374 -75477209 - LTR41 LTR ERVL -586 187 23 607 264 181 0 chr2 177780255 177780471 -75476112 - MIR SINE MIR 0 262 8 2341 97 0 0 chr2 177781887 177782186 -75474397 - AluSc SINE Alu -10 299 1 351 260 64 87 chr2 177782525 177782912 -75473671 - L1M4 LINE L1 -2809 3573 3203 991 211 0 0 chr2 177782912 177783078 -75473505 - FAM SINE Alu -9 166 1 351 260 64 87 chr2 177783078 177783287 -75473296 - L1M4 LINE L1 -3179 3203 2991 241 192 26 26 chr2 177783316 177783394 -75473189 + (TA)n Simple_repeat Simple_repeat 1 78 0 1030 177 0 43 chr2 177783672 177783858 -75472725 + AluJo SINE Alu 1 178 -134 2080 266 45 19 chr2 177783902 177784658 -75471925 - L1M4 LINE L1 -4550 1834 1059 685 323 31 4 chr2 177784681 177784935 -75471648 + MIR SINE MIR 2 262 0 374 294 35 46 chr2 177785882 177786065 -75470518 - MIR SINE MIR -50 212 34 377 238 12 0 chr2 177786159 177786243 -75470340 - MER103 DNA DNA -80 86 2 504 335 28 6 chr2 177786536 177786715 -75469868 + MER5A DNA MER1_type 4 186 -3 207 319 157 15 chr2 177787382 177787586 -75468997 + L3b LINE CR1 1343 1575 -8 231 292 0 14 chr2 177787792 177787864 -75468719 + (CATATA)n Simple_repeat Simple_repeat 2 72 0 757 311 16 24 chr2 177788138 177788387 -75468196 + MIR SINE MIR 11 257 -5 2098 107 28 0 chr2 177788415 177788706 -75467877 + AluSx SINE Alu 1 299 -13 192 40 0 0 chr2 177790142 177790167 -75466416 + (TG)n Simple_repeat Simple_repeat 2 26 0 21 0 0 0 chr2 177790624 177790645 -75465938 + AT_rich Low_complexity Low_complexity 1 21 0 305 340 127 10 chr2 177790670 177790867 -75465716 - MIR SINE MIR -13 249 30 2927 196 42 11 chr2 177791954 177792984 -75463599 + L1MB5 LINE L1 4681 5742 -432 875 139 167 22 chr2 177792985 177793165 -75463418 + MER4B LTR ERV1 2 207 -403 * 2268 98 33 39 chr2 177793164 177793329 -75463254 + MER4E LTR ERV1 408 572 -194 2237 109 3 10 chr2 177793329 177793640 -75462943 - AluSq SINE Alu -4 309 1 2268 98 33 39 chr2 177793640 177793833 -75462750 + MER4E LTR ERV1 572 764 -2 2686 144 7 14 chr2 177793836 177794265 -75462318 + L1MB5 LINE L1 5740 6165 -9 234 291 145 98 chr2 177794323 177794660 -75461923 - L2 LINE L2 0 3272 2920 298 208 56 14 chr2 177795916 177795988 -75460595 - L2 LINE L2 -3 3310 3236 1532 198 32 7 chr2 177796136 177796444 -75460139 + MER66A LTR ERV1 163 478 0 1390 170 0 26 chr2 177796752 177796982 -75459601 - AluJo SINE Alu -4 308 85 1680 264 56 22 chr2 177797634 177798134 -75458449 + MLT1H1 LTR MaLR 9 525 -30 680 235 8 0 chr2 177798135 177798254 -75458329 + FLAM_A SINE Alu 1 120 -13 25 0 0 0 chr2 177798261 177798286 -75458297 + AT_rich Low_complexity Low_complexity 1 25 0 230 227 0 0 chr2 177798316 177798360 -75458223 + MLT1H1 LTR MaLR 547 590 0 373 336 30 62 chr2 177798838 177799210 -75457373 + L1MC4a LINE L1 4912 5271 -875 2347 115 0 6 chr2 177799254 177799568 -75457015 + AluSx SINE Alu 1 312 0 728 322 44 33 chr2 177799568 177800142 -75456441 + L1MC4a LINE L1 5315 5894 -1914 880 114 0 0 chr2 177800417 177800548 -75456035 + L1PA13 LINE L1 6030 6160 -3 437 328 69 22 chr2 177800552 177800784 -75455799 + L1MC4a LINE L1 5384 5626 -2182 249 294 140 23 chr2 177800802 177801016 -75455567 + L1MC4a LINE L1 5695 5933 -1875 225 0 0 0 chr2 177802121 177802146 -75454437 + (A)n Simple_repeat Simple_repeat 1 25 0 838 275 82 19 chr2 177803653 177803922 -75452661 - MLT1I LTR MaLR -120 289 4 892 279 16 13 chr2 177804288 177804536 -75452047 + MIR SINE MIR 13 259 -3 306 258 38 75 chr2 177804712 177804871 -75451712 - L2 LINE L2 0 3313 3161 1918 151 71 0 chr2 177804907 177805231 -75451352 - MER7A DNA MER2_type 0 346 2 2290 98 0 16 chr2 177805320 177805626 -75450957 - AluSg1 SINE Alu -8 301 1 194 351 0 0 chr2 177806813 177806870 -75449713 + L2 LINE L2 3207 3263 -9 2308 155 48 10 chr2 177806952 177807364 -75449219 + MSTA LTR MaLR 1 428 0 331 275 22 90 chr2 177808136 177808314 -75448269 + L1ME4a LINE L1 1552 1717 -4679 1668 142 46 3 chr2 177809060 177809342 -75447241 - L1MC1 LINE L1 -6 6327 6034 662 306 146 35 chr2 177809385 177809898 -75446685 + L1ME4a LINE L1 2723 3292 -2923 292 209 70 23 chr2 177810545 177810631 -75445952 + L1P LINE L1 4041 4130 -2016 15584 179 34 12 chr2 177810767 177812744 -75443839 + L1MA4 LINE L1 2 1934 -4548 2251 110 3 3 chr2 177812744 177813053 -75443530 - AluSq SINE Alu -4 309 1 15584 179 34 12 chr2 177813053 177817157 -75439426 + L1MA4 LINE L1 1934 6201 -281 383 146 45 0 chr2 177817166 177817255 -75439328 + L1MB3 LINE L1 6090 6182 -1 306 308 96 10 chr2 177817301 177817499 -75439084 + L1ME4a LINE L1 4556 4770 -1445 924 291 57 18 chr2 177817897 177818356 -75438227 + L1ME4a LINE L1 4797 5283 -932 2030 113 27 14 chr2 177818356 177818648 -75437935 + AluSx SINE Alu 1 296 -16 924 291 57 18 chr2 177818648 177818751 -75437832 + L1ME4a LINE L1 5283 5381 -834 567 311 63 28 chr2 177818793 177819111 -75437472 + L1ME4a LINE L1 5697 6025 -214 244 237 26 26 chr2 177819619 177819695 -75436888 - MER116 DNA Mariner 0 80 5 2643 224 159 9 chr2 177820558 177821293 -75435290 + L1MA4A LINE L1 23 867 -6342 * 3953 168 28 8 chr2 177821290 177822080 -75434503 + L1MA4A LINE L1 5588 6393 -815 2582 208 93 5 chr2 177822074 177822733 -75433850 - L1P LINE L1 -2778 3368 2652 * 6376 88 6 2 chr2 177822735 177824545 -75432038 + L1PA14 LINE L1 4345 6144 -17 5343 134 26 32 chr2 177824557 177825547 -75431036 + L1MA4A LINE L1 6382 7365 0 327 261 108 40 chr2 177826170 177826346 -75430237 + L1ME4a LINE L1 6001 6188 -2 268 281 12 0 chr2 177828665 177828747 -75427836 - MER103 DNA DNA -82 84 2 807 221 17 6 chr2 177829246 177829427 -75427156 - L1ME1 LINE L1 -5 6161 5979 212 243 43 43 chr2 177829500 177829570 -75427013 - L2 LINE L2 -5 3267 3198 329 175 0 35 chr2 177829817 177829931 -75426652 + CT-rich Low_complexity Low_complexity 1 110 0 219 239 155 14 chr2 177830288 177830359 -75426224 - L2 LINE L2 -253 3060 2980 884 242 125 49 chr2 177831055 177831423 -75425160 - MSTD LTR MaLR 0 396 1 245 311 90 0 chr2 177831583 177831705 -75424878 - L2 LINE L2 -629 2685 2553 1041 191 11 0 chr2 177831714 177831897 -75424686 - MER5A DNA MER1_type -4 185 1 189 309 138 21 chr2 177832956 177833050 -75423533 + MIR SINE MIR 117 221 -41 682 292 116 35 chr2 177833802 177834025 -75422558 - L1ME4a LINE L1 -22 6099 5895 908 178 26 37 chr2 177834025 177834216 -75422367 + MER5A DNA MER1_type 1 189 0 682 292 116 35 chr2 177834216 177834598 -75421985 - L1ME4a LINE L1 -226 5895 5445 310 291 55 0 chr2 177835113 177835295 -75421288 - L1ME4a LINE L1 -747 5399 5208 1831 79 0 9 chr2 177835865 177836093 -75420490 - AluSq SINE Alu -85 228 3 906 259 103 66 chr2 177836554 177836933 -75419650 + MLT1J1 LTR MaLR 2 394 -52 216 303 296 0 chr2 177839302 177839454 -75417129 - MIR SINE MIR 0 262 66 1208 261 108 50 chr2 177839467 177839770 -75416813 + MLT1H1 LTR MaLR 3 350 -205 5242 136 58 35 chr2 177839770 177840717 -75415866 + LTR5 LTR ERVK 1 969 0 1208 261 108 50 chr2 177840717 177840930 -75415653 + MLT1H1 LTR MaLR 350 549 -6 186 336 62 35 chr2 177841106 177841219 -75415364 - L2 LINE L2 -36 3277 3162 190 326 61 39 chr2 177841497 177841727 -75414856 + L2 LINE L2 2616 2850 -464 209 322 58 0 chr2 177841997 177842084 -75414499 + L2 LINE L2 3153 3244 -28 216 158 0 0 chr2 177842084 177842122 -75414461 + (CATATA)n Simple_repeat Simple_repeat 4 41 0 891 178 100 17 chr2 177842481 177842615 -75413968 - AluJo SINE Alu -40 272 118 225 0 0 0 chr2 177842615 177842640 -75413943 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 891 178 100 17 chr2 177842640 177842685 -75413898 - AluJo SINE Alu -194 118 78 1156 99 6 12 chr2 177842698 177842859 -75413724 + AluSp SINE Alu 1 160 -153 1810 129 25 74 chr2 177843458 177843783 -75412800 + AluJo SINE Alu 1 309 -3 428 214 377 0 chr2 177843813 177843967 -75412616 + MIR SINE MIR 44 255 -7 489 274 75 122 chr2 177844150 177844618 -75411965 - L2 LINE L2 0 3272 2827 203 228 88 0 chr2 177845671 177845728 -75410855 + MIR SINE MIR 189 250 -12 399 41 0 0 chr2 177846390 177846439 -75410144 + (CA)n Simple_repeat Simple_repeat 1 49 0 216 0 0 0 chr2 177847360 177847384 -75409199 + (CA)n Simple_repeat Simple_repeat 1 24 0 21 71 0 0 chr2 177849709 177849751 -75406832 + AT_rich Low_complexity Low_complexity 1 42 0 22 70 0 0 chr2 177850133 177850176 -75406407 + AT_rich Low_complexity Low_complexity 1 43 0 389 314 43 29 chr2 177850483 177850693 -75405890 - L1MDa LINE L1 -6306 234 22 2370 97 0 0 chr2 177850833 177851131 -75405452 - AluSc SINE Alu -11 298 1 228 369 54 8 chr2 177852072 177852202 -75404381 - MIR3 SINE MIR -68 140 5 292 258 8 62 chr2 177852357 177852472 -75404111 + L1ME LINE L1 5652 5764 -357 1641 195 3 17 chr2 177852472 177852764 -75403819 + AluJo SINE Alu 1 288 -24 292 258 8 62 chr2 177852764 177852777 -75403806 + L1ME LINE L1 5764 5776 -345 251 154 0 19 chr2 177852879 177852931 -75403652 + (TAGG)n Simple_repeat Simple_repeat 1 51 0 21 0 0 0 chr2 177854379 177854400 -75402183 + AT_rich Low_complexity Low_complexity 1 21 0 517 316 142 0 chr2 177855017 177855229 -75401354 - MIR SINE MIR 0 262 21 1661 218 83 45 chr2 177856386 177857016 -75399567 - MER21B LTR ERV1 -60 803 102 545 172 0 30 chr2 177857060 177857159 -75399424 - MER21B LTR ERV1 -767 96 1 1828 277 98 7 chr2 177857163 177857766 -75398817 + L1MC4a LINE L1 5254 5911 -1897 297 322 13 20 chr2 177858190 177858339 -75398244 + L3b LINE CR1 1104 1251 -332 707 258 129 9 chr2 177859368 177859593 -75396990 + MIR SINE MIR 11 262 0 221 253 0 13 chr2 177859654 177859733 -75396850 + (TTA)n Simple_repeat Simple_repeat 3 80 0 255 307 21 94 chr2 177859784 177859976 -75396607 - L2 LINE L2 -21 3292 3115 900 273 88 31 chr2 177860060 177860448 -75396135 - L2 LINE L2 -411 2903 2494 377 184 40 0 chr2 177860757 177860833 -75395750 + MIR SINE MIR 114 192 -70 738 220 29 12 chr2 177860994 177861167 -75395416 + MLT1I LTR MaLR 232 407 -2 587 303 80 36 chr2 177861350 177861601 -75394982 + L2 LINE L2 2398 2659 -655 227 277 62 0 chr2 177861638 177861703 -75394880 + L2 LINE L2 3200 3268 -4 31 0 0 0 chr2 177861761 177861792 -75394791 + AT_rich Low_complexity Low_complexity 1 31 0 1674 159 48 7 chr2 177861793 177862064 -75394519 + AluJo SINE Alu 1 282 -30 389 184 110 55 chr2 177862365 177862474 -75394109 - MER5C DNA MER1_type 0 324 210 297 216 181 9 chr2 177862698 177862814 -75393769 + MIR3 SINE MIR 35 170 -38 1500 162 118 0 chr2 177863508 177863779 -75392804 + AluJb SINE Alu 1 303 -9 1118 158 0 0 chr2 177863779 177863950 -75392633 + AluJo/FRAM SINE Alu 134 304 -8 501 183 8 0 chr2 177864259 177864361 -75392222 + MER5A DNA MER1_type 4 106 -83 2388 104 0 0 chr2 177864720 177865019 -75391564 - AluSx SINE Alu -13 299 1 21 0 0 0 chr2 177865468 177865489 -75391094 + AT_rich Low_complexity Low_complexity 1 21 0 1036 62 78 0 chr2 177865802 177865931 -75390652 - MER85 DNA T2_type 0 139 1 2862 217 48 75 chr2 177869252 177869576 -75387007 - MER21B LTR ERV1 -58 805 474 2414 97 0 3 chr2 177869576 177869887 -75386696 + AluSq SINE Alu 2 311 -2 2862 217 48 75 chr2 177869887 177870372 -75386211 - MER21B LTR ERV1 -389 474 18 1219 189 72 18 chr2 177870375 177870597 -75385986 + MER8 DNA MER2_type 6 239 0 2395 82 13 0 chr2 177870599 177870902 -75385681 + AluSp SINE Alu 1 307 -6 1522 133 0 5 chr2 177870906 177871124 -75385459 + AluSg/x SINE Alu 79 295 -15 31 44 0 0 chr2 177871126 177871171 -75385412 + AT_rich Low_complexity Low_complexity 1 45 0 608 249 99 28 chr2 177871505 177871758 -75384825 - MLT1J1 LTR MaLR -175 271 1 2059 93 0 18 chr2 177872038 177872317 -75384266 - AluSg1 SINE Alu -9 300 27 605 75 0 0 chr2 177872465 177872545 -75384038 - Alu SINE Alu -11 301 222 338 328 47 29 chr2 177872548 177872719 -75383864 + MER5B DNA MER1_type 1 174 -4 357 219 47 55 chr2 177872746 177872874 -75383709 + MER103 DNA DNA 31 157 -9 252 336 52 43 chr2 177872959 177873075 -75383508 + L2 LINE L2 3155 3271 -1 1120 130 5 16 chr2 177873423 177873607 -75382976 - AluSg/x SINE Alu 0 310 129 369 268 119 31 chr2 177873691 177873765 -75382818 + MIR SINE MIR 8 74 -188 981 53 83 30 chr2 177873765 177873897 -75382686 + MER85 DNA T2_type 1 139 0 369 268 119 31 chr2 177873897 177874016 -75382567 + MIR SINE MIR 74 218 -44 631 253 52 13 chr2 177878611 177878765 -75377818 + MIR SINE MIR 13 172 -90 21 0 0 0 chr2 177878786 177878807 -75377776 + AT_rich Low_complexity Low_complexity 1 21 0 2294 113 0 0 chr2 177878854 177879165 -75377418 + AluY SINE Alu 1 311 0 1683 60 0 64 chr2 177881958 177882192 -75374391 + AluSq SINE Alu 1 219 -94 298 293 57 0 chr2 177882312 177882418 -75374165 + L1ME3A LINE L1 6031 6142 -28 766 189 0 16 chr2 177882498 177882625 -75373958 + FLAM_A SINE Alu 1 125 -8 2195 165 18 0 chr2 177882839 177883178 -75373405 - MER7A DNA MER2_type -1 345 3 440 259 14 14 chr2 177885210 177885349 -75371234 - L1M4 LINE L1 -1113 5033 4895 664 101 20 10 chr2 177885354 177885453 -75371130 + AluY SINE Alu 2 101 -210 2343 74 0 7 chr2 177935648 177935945 -75320638 + AluY SINE Alu 5 299 -12 228 35 0 0 chr2 177937270 177937299 -75319284 + (TG)n Simple_repeat Simple_repeat 2 30 0 454 205 68 99 chr2 177937674 177937738 -75318845 + MER117 DNA MER1_type 2 66 -131 746 229 72 0 chr2 177937738 177937904 -75318679 + MER5B DNA MER1_type 1 178 0 1054 203 16 5 chr2 177937913 177938100 -75318483 - MER5A DNA MER1_type 0 189 1 454 205 68 99 chr2 177938100 177938186 -75318397 + MER117 DNA MER1_type 74 157 -40 2331 105 0 3 chr2 177938974 177939280 -75317303 + AluSx SINE Alu 1 305 -7 943 174 26 37 chr2 177939397 177939587 -75316996 + MER20 DNA MER1_type 29 216 -3 666 217 0 0 chr2 177939591 177939706 -75316877 + FLAM_A SINE Alu 1 115 -18 312 167 0 17 chr2 177939740 177939800 -75316783 - L1MCa LINE L1 -4362 2064 2006 37 39 0 0 chr2 177940364 177940415 -75316168 + AT_rich Low_complexity Low_complexity 1 51 0 322 276 41 10 chr2 177940617 177940715 -75315868 + MIR SINE MIR 17 117 -91 236 324 29 0 chr2 177942167 177942272 -75314311 + Charlie3 DNA MER1_type 1497 1604 -1106 647 243 32 132 chr2 177942862 177943211 -75313372 - MLT1L LTR MaLR -89 526 109 225 278 87 40 chr2 177943412 177943538 -75313045 - MIR SINE MIR -13 249 118 234 293 35 0 chr2 177943649 177943707 -75312876 - MIR SINE MIR -169 93 34 393 305 183 19 chr2 177943744 177943769 -75312814 - MIR SINE MIR -13 249 229 2086 133 0 10 chr2 177943769 177944069 -75312514 - AluSg SINE Alu -13 297 1 393 305 183 19 chr2 177944069 177944256 -75312327 - MIR SINE MIR -33 229 2 515 298 162 0 chr2 177945389 177945580 -75311003 + MIR SINE MIR 26 247 -15 414 286 79 0 chr2 177946647 177946787 -75309796 + Charlie8 DNA MER1_type 26 176 -2241 419 262 267 11 chr2 177946927 177947118 -75309465 + MIR SINE MIR 23 262 0 2110 130 0 7 chr2 177947691 177947990 -75308593 - AluSc SINE Alu -12 297 1 1425 148 0 0 chr2 177948441 177948658 -75307925 + L1PA13 LINE L1 5947 6163 0 239 233 0 14 chr2 177948681 177948754 -75307829 + CT-rich Low_complexity Low_complexity 2 73 0 378 325 46 18 chr2 177950661 177950876 -75305707 + MIR SINE MIR 41 260 -2 3407 198 79 36 chr2 177950993 177951815 -75304768 + L1MC4 LINE L1 6991 7867 -175 2375 95 0 10 chr2 177951815 177952120 -75304463 + AluSq SINE Alu 1 302 -11 3407 198 79 36 chr2 177952120 177952305 -75304278 + L1MC4 LINE L1 7867 8042 0 21 0 0 0 chr2 177953067 177953088 -75303495 + AT_rich Low_complexity Low_complexity 1 21 0 465 185 31 31 chr2 177953215 177953345 -75303238 + MER53 DNA DNA 1 130 -59 825 199 40 0 chr2 177953345 177953521 -75303062 + Tigger1 DNA MER2_type 1 183 -2235 * 1019 131 96 0 chr2 177953491 177953689 -75302894 + Tigger1 DNA MER2_type 2202 2418 0 238 129 0 157 chr2 177953689 177953724 -75302859 + MER53 DNA DNA 135 157 -32 1664 191 22 4 chr2 177953724 177954025 -75302558 - AluJo SINE Alu 0 306 1 238 129 0 157 chr2 177954025 177954054 -75302529 + MER53 DNA DNA 157 189 0 631 276 97 38 chr2 177954246 177954536 -75302047 + L2 LINE L2 3005 3311 -2 211 315 155 25 chr2 177954853 177955053 -75301530 + MIR SINE MIR 16 241 -21 2373 97 0 3 chr2 177956204 177956513 -75300070 + AluSg SINE Alu 1 308 -2 824 148 0 0 chr2 177956523 177956638 -75299945 + AluJb SINE Alu 173 287 -25 1827 161 50 3 chr2 177956733 177957031 -75299552 - AluJb SINE Alu 0 312 1 261 281 50 8 chr2 177958317 177958438 -75298145 - L1MC4 LINE L1 -317 7725 7600 360 310 16 27 chr2 177958489 177958673 -75297910 - L1MC5 LINE L1 -519 7442 7261 321 322 75 47 chr2 177958677 177958891 -75297692 - L1MC4a LINE L1 -458 7350 7131 1854 172 0 10 chr2 177958891 177959205 -75297378 - AluJb SINE Alu 0 312 2 206 335 57 3 chr2 177959270 177959357 -75297226 + MIR SINE MIR 57 146 -62 1711 149 4 11 chr2 177959359 177959621 -75296962 + AluJo SINE Alu 36 295 -17 25 31 0 0 chr2 177959714 177959746 -75296837 + AT_rich Low_complexity Low_complexity 1 32 0 643 209 0 0 chr2 177959746 177959856 -75296727 - FLAM_A SINE Alu -25 117 8 236 91 23 0 chr2 177959944 177959988 -75296595 + (CAA)n Simple_repeat Simple_repeat 2 46 0 427 261 28 72 chr2 177960650 177960830 -75295753 + MIR SINE MIR 4 175 -87 556 227 17 58 chr2 177960965 177961137 -75295446 - L2 LINE L2 -1 3312 3148 483 263 17 8 chr2 177961263 177961381 -75295202 - MIR3 SINE MIR -5 203 85 327 269 46 9 chr2 177961692 177961800 -75294783 - MER103 DNA DNA -52 114 3 765 132 1 8 chr2 177964266 177964436 -75292147 - L1MDa LINE L1 -3928 2642 2452 695 285 91 18 chr2 177964499 177964720 -75291863 + MIR SINE MIR 26 262 0 276 324 133 44 chr2 177965048 177965460 -75291123 + L2 LINE L2 2569 3017 -255 2389 52 0 36 chr2 177966327 177966632 -75289951 + AluY SINE Alu 6 299 -12 223 128 106 0 chr2 177966838 177966885 -75289698 - L2 LINE L2 0 3313 3262 443 223 45 0 chr2 177966887 177966999 -75289584 - MER5C DNA MER1_type 0 324 208 677 266 46 93 chr2 177967026 177967243 -75289340 - L2 LINE L2 -89 3224 3035 1461 57 0 0 chr2 177967243 177967420 -75289163 + AluY SINE Alu 134 310 -1 677 266 46 93 chr2 177967420 177967619 -75288964 - L2 LINE L2 -278 3035 2828 325 313 20 0 chr2 177967676 177967775 -75288808 - MER5A DNA MER1_type -80 109 9 319 238 119 10 chr2 177967784 177967885 -75288698 - L2 LINE L2 -541 2773 2662 522 252 18 0 chr2 177968926 177969037 -75287546 + MER81 DNA DNA 1 113 -1 610 244 56 11 chr2 177969611 177969791 -75286792 - MER5A DNA MER1_type -1 188 1 347 175 0 0 chr2 177969864 177969921 -75286662 - L2 LINE L2 -2 3270 3214 1812 177 0 3 chr2 177970179 177970484 -75286099 - AluSx SINE Alu -8 304 1 21 0 0 0 chr2 177970607 177970628 -75285955 + AT_rich Low_complexity Low_complexity 1 21 0 363 23 0 0 chr2 177970628 177970672 -75285911 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 549 180 0 0 chr2 177970674 177970763 -75285820 - AluSg/x SINE Alu -31 278 190 261 0 0 0 chr2 177970823 177970852 -75285731 + (A)n Simple_repeat Simple_repeat 1 29 0 2137 108 137 34 chr2 177971021 177971409 -75285174 + MSTA LTR MaLR 1 428 0 9403 125 27 43 chr2 177971411 177973015 -75283568 + MSTA-int LTR MaLR 3 1580 0 2035 153 140 8 chr2 177973015 177973393 -75283190 + MSTA LTR MaLR 1 428 0 208 139 0 0 chr2 177973424 177973460 -75283123 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 4431 146 79 67 chr2 177974380 177974874 -75281709 - L1MC2 LINE L1 -1 6343 5856 1819 188 0 0 chr2 177974874 177975161 -75281422 + AluJo SINE Alu 1 287 -25 4431 146 79 67 chr2 177975161 177975198 -75281385 - L1MC2 LINE L1 -488 5856 5821 2190 128 0 0 chr2 177975198 177975494 -75281089 + AluSx SINE Alu 1 296 -16 4431 146 79 67 chr2 177975494 177975804 -75280779 - L1MC2 LINE L1 -523 5821 5481 2273 109 3 3 chr2 177975804 177976106 -75280477 - AluSq SINE Alu -11 302 1 4431 146 79 67 chr2 177976106 177976360 -75280223 - L1MC2 LINE L1 -863 5481 5232 2263 61 0 0 chr2 177976414 177976691 -75279892 - AluY SINE Alu -2 309 33 267 336 144 0 chr2 177976847 177976972 -75279611 - L2 LINE L2 -4 3309 3167 2294 91 0 7 chr2 177977304 177977601 -75278982 + AluY SINE Alu 1 295 -16 735 271 83 58 chr2 177977613 177978008 -75278575 - L1ME3A LINE L1 -53 6117 5713 780 252 124 14 chr2 177978042 177978260 -75278323 + MIR SINE MIR 7 248 -14 193 289 58 0 chr2 177978371 177978423 -75278160 - MIR3 SINE MIR -32 176 122 186 71 0 0 chr2 177979197 177979225 -75277358 + (TG)n Simple_repeat Simple_repeat 1 28 0 236 244 0 0 chr2 177979303 177979348 -75277235 + MIR SINE MIR 212 256 -6 183 194 28 0 chr2 177980683 177980719 -75275864 - L3 LINE CR1 -73 1504 1468 583 140 0 15 chr2 177982308 177982444 -75274139 + (CA)n Simple_repeat Simple_repeat 2 135 0 772 302 59 23 chr2 177982451 177982842 -75273741 - LTR33 LTR ERVL -3 518 114 2159 137 0 0 chr2 177983475 177983775 -75272808 + AluSx SINE Alu 1 300 -12 249 273 30 20 chr2 177983891 177983990 -75272593 + L1ME LINE L1 5533 5632 -489 309 290 65 0 chr2 177984025 177984118 -75272465 + L1ME LINE L1 5756 5854 -267 461 307 203 32 chr2 177984276 177984592 -75271991 + L1ME4a LINE L1 5283 5652 -469 265 305 17 0 chr2 177984717 177984776 -75271807 + L2 LINE L2 3213 3272 0 2214 129 3 0 chr2 177988864 177989174 -75267409 + AluSx SINE Alu 1 311 -1 322 323 16 8 chr2 177989725 177989852 -75266731 - MIR SINE MIR -114 148 21 531 318 73 45 chr2 177990581 177991109 -75265474 - L2 LINE L2 -181 3091 2439 1816 149 23 36 chr2 177991316 177991432 -75265151 + AluJo SINE Alu 3 119 -193 2417 78 0 0 chr2 177991432 177991725 -75264858 + AluSg SINE Alu 1 293 -17 1816 149 23 36 chr2 177991725 177991909 -75264674 + AluJo SINE Alu 119 299 -13 314 274 65 32 chr2 177992456 177992580 -75264003 + L1MC4 LINE L1 6612 6739 -1303 307 239 33 33 chr2 177993234 177993326 -75263257 - MIR3 SINE MIR -21 187 96 193 252 113 52 chr2 177994047 177994162 -75262421 - MIR SINE MIR -50 212 91 240 155 17 35 chr2 177994182 177994240 -75262343 + CT-rich Low_complexity Low_complexity 4 60 0 335 321 104 17 chr2 177994329 177994569 -75262014 + L1ME4a LINE L1 5659 5919 -202 1272 223 20 7 chr2 177994617 177994918 -75261665 - MER58B DNA MER1_type 0 341 37 466 305 40 28 chr2 177995183 177995360 -75261223 - MIR3 SINE MIR -11 197 19 1029 208 183 3 chr2 177995404 177995868 -75260715 - LTR50 LTR ERVL -111 684 55 1439 293 67 13 chr2 177995957 177996482 -75260101 - ERVL LTR ERVL -361 5403 4851 26 30 0 0 chr2 177996496 177996529 -75260054 + AT_rich Low_complexity Low_complexity 1 33 0 279 338 73 33 chr2 177996547 177996698 -75259885 + L2 LINE L2 3109 3265 -7 43 64 0 0 chr2 177998549 177998627 -75257956 + AT_rich Low_complexity Low_complexity 1 78 0 974 167 70 109 chr2 177999261 177999640 -75256943 + MER69 DNA AcHobo 2101 2463 -63 2298 111 3 0 chr2 177999640 177999947 -75256636 + AluSx SINE Alu 1 308 -4 974 167 70 109 chr2 177999947 177999997 -75256586 + MER69 DNA AcHobo 2463 2513 -13 375 23 0 0 chr2 178000003 178000047 -75256536 + (TG)n Simple_repeat Simple_repeat 1 44 0 574 281 75 28 chr2 178000196 178001012 -75255571 - L1ME LINE L1 -398 5764 4879 192 299 93 65 chr2 178002444 178002551 -75254032 + L2 LINE L2 3139 3248 -24 433 268 17 87 chr2 178002892 178003123 -75253460 - MIR SINE MIR 0 262 48 1249 138 0 17 chr2 178004279 178004460 -75252123 - MER5B DNA MER1_type 0 178 1 1495 100 168 24 chr2 178005054 178005332 -75251251 + AluSx SINE Alu 1 314 0 18113 114 50 18 chr2 178006383 178007437 -75249146 + Tigger3(Golem) DNA MER2_type 168 1187 -1842 1669 164 3 27 chr2 178007437 178007730 -75248853 + AluJo SINE Alu 4 289 -23 18113 114 50 18 chr2 178007730 178009449 -75247134 + Tigger3(Golem) DNA MER2_type 1187 3029 0 474 257 46 0 chr2 178010916 178011025 -75245558 - MIR3 SINE MIR -9 199 86 489 274 139 19 chr2 178011241 178011449 -75245134 - MIR SINE MIR -15 247 15 248 191 0 21 chr2 178011856 178011903 -75244680 - MIR SINE MIR -11 251 206 388 248 60 43 chr2 178011927 178012044 -75244539 + L2 LINE L2 3180 3298 -15 277 190 8 8 chr2 178012132 178012253 -75244330 + (TA)n Simple_repeat Simple_repeat 1 121 0 292 170 0 0 chr2 178012266 178012319 -75244264 + (TAGA)n Simple_repeat Simple_repeat 1 53 0 1757 157 7 18 chr2 178012401 178012687 -75243896 - AluJo SINE Alu -29 283 1 260 319 0 0 chr2 178012689 178012758 -75243825 - MIR SINE MIR -115 147 79 295 306 52 89 chr2 178013230 178013478 -75243105 + MLT1K LTR MaLR 1 239 -349 201 105 0 53 chr2 178013621 178013659 -75242924 + (GGAGA)n Simple_repeat Simple_repeat 1 36 0 279 255 199 7 chr2 178013683 178013824 -75242759 + MLT1K LTR MaLR 418 585 -3 279 0 0 0 chr2 178014112 178014143 -75242440 + (CA)n Simple_repeat Simple_repeat 1 31 0 382 297 88 34 chr2 178014289 178014497 -75242086 + MIR SINE MIR 1 210 -52 1924 151 10 7 chr2 178014723 178015022 -75241561 - AluJo SINE Alu -12 300 1 1582 92 26 13 chr2 178016451 178016679 -75239904 + AluSg/x SINE Alu 79 309 -3 491 341 65 0 chr2 178017955 178018172 -75238411 + MIR SINE MIR 8 238 -24 191 281 0 53 chr2 178018271 178018328 -75238255 - L2 LINE L2 -8 3264 3211 315 310 119 19 chr2 178018654 178018773 -75237810 - L1M4 LINE L1 -857 5289 5183 2157 94 0 4 chr2 178018773 178019050 -75237533 + AluSx SINE Alu 25 300 -12 315 310 119 19 chr2 178019050 178019191 -75237392 - L1M4 LINE L1 -963 5183 5003 22 0 0 0 chr2 178020805 178020827 -75235756 + AT_rich Low_complexity Low_complexity 1 22 0 291 191 0 36 chr2 178020893 178020977 -75235606 + CT-rich Low_complexity Low_complexity 2 82 0 181 370 172 0 chr2 178021866 178022058 -75234525 + L2 LINE L2 2563 2787 -527 2326 105 3 6 chr2 178022070 178022383 -75234200 + AluSp SINE Alu 2 313 0 451 222 91 11 chr2 178023017 178023118 -75233465 + L1MC4a LINE L1 5730 5822 -1986 2153 180 0 0 chr2 178023118 178023462 -75233121 + MER7A DNA MER2_type 4 345 -1 451 222 91 11 chr2 178023462 178023536 -75233047 + L1MC4a LINE L1 5822 5919 -1889 201 74 0 0 chr2 178023541 178023568 -75233015 + (TTTTTA)n Simple_repeat Simple_repeat 3 29 0 28 48 0 0 chr2 178023753 178023795 -75232788 + AT_rich Low_complexity Low_complexity 1 42 0 2199 286 161 40 chr2 178024195 178024860 -75231723 + L2 LINE L2 1683 2266 -1047 2208 98 3 10 chr2 178024860 178025155 -75231428 + AluSx SINE Alu 1 293 -19 2199 286 161 40 chr2 178025155 178025933 -75230650 + L2 LINE L2 2266 3294 -19 2162 92 3 0 chr2 178026023 178026338 -75230245 + AluSp SINE Alu 1 316 0 1235 269 74 28 chr2 178026541 178026931 -75229652 - MLT1I LTR MaLR -1 408 1 623 171 29 0 chr2 178027396 178027501 -75229082 + AluSg/x SINE Alu 181 288 -21 216 86 0 0 chr2 178027954 178027989 -75228594 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 247 188 21 0 chr2 178028562 178028610 -75227973 + (CA)n Simple_repeat Simple_repeat 2 50 0 335 266 117 99 chr2 178028907 178029241 -75227342 - MLT1K LTR MaLR -138 450 111 2302 87 0 17 chr2 178029339 178029639 -75226944 + AluY SINE Alu 1 295 -16 483 220 54 75 chr2 178031675 178031861 -75224722 + L2 LINE L2 3112 3293 -20 3640 63 11 16 chr2 178032846 178033292 -75223291 + MLT2A1 LTR ERVL 1 444 0 491 295 164 5 chr2 178033428 178033635 -75222948 + MIR SINE MIR 22 261 -1 518 241 35 17 chr2 178033873 178033989 -75222594 - MER5A DNA MER1_type -54 135 18 561 255 372 9 chr2 178034493 178034826 -75221757 - L2 LINE L2 -9 3304 2851 718 134 9 0 chr2 178034832 178034944 -75221639 - MLT1F LTR MaLR 0 567 455 8182 39 0 1 chr2 178034944 178035842 -75220741 - MER11D LTR ERVK 0 897 1 8334 31 4 2 chr2 178035842 178036810 -75219773 - HERVK11D LTR ERVK 0 7752 6783 * 8714 36 8 1 chr2 178036800 178037820 -75218763 - HERVK11D LTR ERVK -1161 6591 5565 7555 35 4 30 chr2 178037820 178038735 -75217848 - MER11D LTR ERVK -5 892 1 1035 237 137 68 chr2 178038735 178039019 -75217564 - MLT1F LTR MaLR -107 435 113 1857 83 0 0 chr2 178039019 178039247 -75217336 - AluSg/x SINE Alu 0 312 85 1035 237 137 68 chr2 178039247 178039369 -75217214 - MLT1F LTR MaLR -429 113 1 412 233 56 0 chr2 178039379 178039469 -75217114 - L2 LINE L2 -518 2796 2702 600 228 114 72 chr2 178039606 178039753 -75216830 + MIR SINE MIR 3 165 -97 2119 223 58 32 chr2 178039753 178040174 -75216409 - LTR40a LTR ERVL 0 519 81 2300 94 0 0 chr2 178040174 178040473 -75216110 - AluSx SINE Alu -13 299 1 2119 223 58 32 chr2 178040473 178040553 -75216030 - LTR40a LTR ERVL -438 81 5 600 228 114 72 chr2 178040553 178040642 -75215941 + MIR SINE MIR 165 249 -13 2035 127 3 40 chr2 178040784 178041107 -75215476 - AluSx SINE Alu -1 311 1 42187 59 8 1 chr2 178041858 178047956 -75208627 - L1PA5 LINE L1 -1 6153 11 2019 144 3 3 chr2 178048852 178049151 -75207432 + AluSx SINE Alu 1 299 -13 12195 107 24 17 chr2 178049224 178051042 -75205541 + L1PA5 LINE L1 11 1840 -4306 * 16793 55 10 2 chr2 178051037 178054902 -75201681 + L1PA5 LINE L1 2242 6145 -9 312 27 0 0 chr2 178056237 178056274 -75200309 + (TG)n Simple_repeat Simple_repeat 2 38 0 2274 98 0 3 chr2 178056456 178056753 -75199830 - AluSx SINE Alu -12 300 5 249 33 0 0 chr2 178057365 178057395 -75199188 + (TC)n Simple_repeat Simple_repeat 1 30 0 21 0 0 0 chr2 178057480 178057501 -75199082 + AT_rich Low_complexity Low_complexity 1 21 0 260 245 0 0 chr2 178057844 178057897 -75198686 - L3 LINE CR1 -2 1575 1523 324 222 39 92 chr2 178058086 178058239 -75198344 - MIR3 SINE MIR -52 156 12 699 220 0 89 chr2 178059381 178059572 -75197011 + MER5B DNA MER1_type 4 177 -1 215 234 106 32 chr2 178059605 178059699 -75196884 - MIR SINE MIR -21 241 141 1566 230 65 51 chr2 178059776 178060285 -75196298 - MER113 DNA MER1_type? -4 517 2 861 297 42 21 chr2 178060488 178060916 -75195667 + L1ME LINE L1 5387 5823 -298 305 47 23 0 chr2 178061466 178061509 -75195074 + (TTCA)n Simple_repeat Simple_repeat 2 45 0 315 230 23 92 chr2 178062270 178062357 -75194226 + MER5B DNA MER1_type 1 81 -97 663 174 118 0 chr2 178063414 178063558 -75193025 + MER53 DNA DNA 1 161 -28 2104 136 0 3 chr2 178063569 178063871 -75192712 - AluSx SINE Alu -11 301 1 2280 102 10 3 chr2 178064473 178064776 -75191807 + AluSx SINE Alu 1 305 -7 2430 67 3 0 chr2 178065274 178065571 -75191012 + AluSp SINE Alu 1 298 -15 1836 167 0 13 chr2 178065669 178065980 -75190603 - AluJb SINE Alu -5 307 1 1912 142 29 4 chr2 178067632 178067913 -75188670 + AluSx SINE Alu 1 288 -24 305 120 46 46 chr2 178067921 178068096 -75188487 + (TTATA)n Simple_repeat Simple_repeat 5 179 0 214 100 113 0 chr2 178068098 178068178 -75188405 + (TA)n Simple_repeat Simple_repeat 1 89 0 313 117 56 37 chr2 178068186 178068348 -75188235 + (TATAA)n Simple_repeat Simple_repeat 5 169 0 461 117 78 0 chr2 178068361 178068618 -75187965 + (TATAA)n Simple_repeat Simple_repeat 1 277 0 263 90 111 0 chr2 178068608 178068752 -75187831 + (TA)n Simple_repeat Simple_repeat 2 161 0 * 2194 109 14 0 chr2 178068829 178069122 -75187461 + AluSx SINE Alu 1 297 -15 238 311 115 33 chr2 178069170 178069292 -75187291 + MIR3 SINE MIR 30 161 -47 1871 79 0 0 chr2 178069305 178069533 -75187050 - AluSg/x SINE Alu 0 310 83 2208 78 0 0 chr2 178069957 178070227 -75186356 - AluSg SINE Alu -1 309 40 203 211 0 158 chr2 178073173 178073287 -75183296 + L2 LINE L2 3137 3232 -40 2321 88 0 38 chr2 178073640 178073958 -75182625 + AluSg SINE Alu 1 306 -4 27 73 0 0 chr2 178074195 178074250 -75182333 + AT_rich Low_complexity Low_complexity 1 55 0 2284 93 3 3 chr2 178074618 178074919 -75181664 - AluSp SINE Alu -12 301 1 477 272 123 25 chr2 178074977 178075212 -75181371 - HAL1 LINE L1 0 2507 2250 2205 115 3 6 chr2 178075212 178075525 -75181058 + AluSx SINE Alu 1 312 0 2083 150 0 6 chr2 178075681 178075995 -75180588 - AluSx SINE Alu 0 312 1 472 235 49 64 chr2 178075997 178076201 -75180382 - L1ME3A LINE L1 -5 6445 6245 1563 258 30 60 chr2 178076257 178076469 -75180114 - L1ME3A LINE L1 -208 6242 6025 2405 87 0 10 chr2 178076469 178076779 -75179804 - AluSx SINE Alu -5 307 1 1563 258 30 60 chr2 178076779 178077232 -75179351 - L1ME3A LINE L1 -425 6025 5597 1029 281 126 31 chr2 178077259 178077382 -75179201 - L1ME3A LINE L1 -898 5528 5418 613 131 108 8 chr2 178077382 178077512 -75179071 - L1PA12 LINE L1 0 6168 6026 1029 281 126 31 chr2 178077512 178077531 -75179052 - L1ME3A LINE L1 -1008 5418 5402 1896 143 27 3 chr2 178077531 178077825 -75178758 + AluJb SINE Alu 11 311 -1 1029 281 126 31 chr2 178077825 178078268 -75178315 - L1ME3A LINE L1 -1024 5402 4886 910 121 0 0 chr2 178078270 178078394 -75178189 + FLAM_C SINE Alu 1 124 -19 1112 165 25 55 chr2 178078427 178078498 -75178085 + AluJo SINE Alu 58 130 -182 2321 92 7 0 chr2 178078498 178078792 -75177791 - AluSg SINE Alu -14 296 1 1112 165 25 55 chr2 178078792 178078956 -75177627 + AluJo SINE Alu 130 286 -26 873 240 77 56 chr2 178078972 178079131 -75177452 - L1ME3A LINE L1 -1530 4896 4742 2118 135 0 3 chr2 178079131 178079428 -75177155 - AluSx SINE Alu -16 296 1 873 240 77 56 chr2 178079428 178079734 -75176849 - L1ME3A LINE L1 -1684 4742 4421 732 267 168 43 chr2 178079735 178080109 -75176474 - MLT1H LTR MaLR 0 549 129 274 226 48 24 chr2 178080178 178080262 -75176321 - L1ME3A LINE L1 -3316 3110 3025 1309 151 60 48 chr2 178080266 178080388 -75176195 - AluJo SINE Alu -57 255 136 561 30 0 0 chr2 178080388 178080455 -75176128 + (TG)n Simple_repeat Simple_repeat 2 68 0 1309 151 60 48 chr2 178080455 178080584 -75175999 - AluJo SINE Alu -176 136 1 231 219 0 31 chr2 178080821 178080885 -75175698 - L1MC4 LINE L1 -1339 6703 6642 945 270 37 27 chr2 178080946 178081364 -75175219 - L1MCa LINE L1 -4598 2009 1391 2352 90 0 0 chr2 178081754 178082053 -75174530 + AluSg SINE Alu 1 299 -11 866 203 14 0 chr2 178082330 178082473 -75174110 - AluJo SINE Alu -148 164 20 2295 64 0 0 chr2 178082557 178082883 -75173700 - AluY SINE Alu 0 326 1 1721 177 14 0 chr2 178082934 178083217 -75173366 + AluJo SINE Alu 3 289 -23 245 183 50 0 chr2 178083253 178083313 -75173270 - L1MB7 LINE L1 0 6184 6122 2102 113 3 3 chr2 178083405 178083710 -75172873 - AluJb SINE Alu 0 305 1 237 360 137 29 chr2 178083745 178083920 -75172663 - L2 LINE L2 -102 3170 2977 2322 94 3 0 chr2 178084104 178084411 -75172172 - AluSx SINE Alu 0 312 5 349 305 71 54 chr2 178084456 178084695 -75171888 - L2 LINE L2 -482 2832 2590 180 324 56 0 chr2 178084889 178084960 -75171623 - L2 LINE L2 -1520 1794 1720 192 311 54 0 chr2 178086148 178086222 -75170361 - MIR3 SINE MIR -21 187 110 2224 76 14 0 chr2 178086362 178086662 -75169921 + AluSq SINE Alu 5 308 0 23 0 0 0 chr2 178086787 178086810 -75169773 + AT_rich Low_complexity Low_complexity 1 23 0 189 321 101 9 chr2 178086878 178086987 -75169596 - MIR SINE MIR -124 138 20 2496 90 3 0 chr2 178087104 178087415 -75169168 + AluSx SINE Alu 1 312 0 574 256 145 30 chr2 178087451 178087685 -75168898 - MIR SINE MIR 0 262 2 2382 93 3 0 chr2 178088486 178088788 -75167795 - AluSp SINE Alu -10 303 1 240 59 0 0 chr2 178088919 178088953 -75167630 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2159 97 4 0 chr2 178088957 178089236 -75167347 - AluSp SINE Alu -32 281 2 717 121 0 48 chr2 178089248 178089372 -75167211 - FLAM_A SINE Alu -2 140 23 1192 139 6 0 chr2 178089405 178089578 -75167005 + MER58B DNA MER1_type 167 340 -1 2363 66 0 23 chr2 178090763 178091065 -75165518 + AluY SINE Alu 1 295 -16 258 300 0 0 chr2 178091078 178091138 -75165445 - L2 LINE L2 0 3272 3213 252 301 108 34 chr2 178091683 178091859 -75164724 + MER5A DNA MER1_type 1 189 0 183 80 0 0 chr2 178092112 178092137 -75164446 + (CAG)n Simple_repeat Simple_repeat 2 26 0 238 83 0 42 chr2 178092248 178092296 -75164287 + (TA)n Simple_repeat Simple_repeat 2 47 0 797 212 66 0 chr2 178093078 178093260 -75163323 + AluJo SINE Alu 121 312 0 432 0 0 0 chr2 178093338 178093386 -75163197 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 1970 146 0 13 chr2 178093603 178093905 -75162678 + AluJo SINE Alu 6 303 -9 204 97 0 0 chr2 178094287 178094318 -75162265 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 417 227 13 93 chr2 178094330 178094480 -75162103 - L2 LINE L2 -31 3282 3145 252 204 37 0 chr2 178094554 178094608 -75161975 - MER94 DNA DNA -78 56 1 355 241 15 53 chr2 178094625 178094758 -75161825 - L2 LINE L2 -207 3106 2979 1839 114 0 15 chr2 178094866 178095129 -75161454 + AluSc SINE Alu 34 292 -17 249 87 22 0 chr2 178095218 178095264 -75161319 + L1MA9 LINE L1 6236 6282 -30 28 29 0 0 chr2 178095264 178095299 -75161284 + AT_rich Low_complexity Low_complexity 1 35 0 2380 94 3 0 chr2 178095470 178095779 -75160804 + AluSg SINE Alu 1 310 0 2238 100 3 3 chr2 178095791 178096091 -75160492 + AluSg SINE Alu 1 300 -10 2262 96 0 0 chr2 178096098 178096390 -75160193 + AluY SINE Alu 1 292 -19 2012 129 3 3 chr2 178097492 178097787 -75158796 - AluJb SINE Alu -12 300 6 21 0 0 0 chr2 178099189 178099210 -75157373 + AT_rich Low_complexity Low_complexity 1 21 0 2537 59 3 3 chr2 178101308 178101612 -75154971 - AluSp SINE Alu -9 304 1 505 263 9 0 chr2 178101645 178101759 -75154824 - L2 LINE L2 -2 3311 3197 1196 150 0 0 chr2 178102197 178102377 -75154206 + AluSg/x SINE Alu 131 310 0 2604 65 0 0 chr2 178102538 178102846 -75153737 + AluY SINE Alu 1 308 -3 2171 132 3 0 chr2 178102858 178103178 -75153405 + AluSx SINE Alu 1 321 0 2257 101 3 19 chr2 178103611 178103929 -75152654 + AluSp SINE Alu 1 313 0 225 0 0 0 chr2 178104059 178104084 -75152499 + (T)n Simple_repeat Simple_repeat 1 25 0 238 245 20 0 chr2 178104516 178104565 -75152018 - L2 LINE L2 -3 3269 3220 378 334 93 60 chr2 178104633 178104879 -75151704 + L1ME LINE L1 4692 4952 -1194 1761 205 106 17 chr2 178104879 178105352 -75151231 - LTR40a LTR ERVL 0 519 5 378 334 93 60 chr2 178105352 178105423 -75151160 + L1ME LINE L1 4952 5019 -1127 686 187 41 0 chr2 178105433 178105556 -75151027 + FLAM_A SINE Alu 14 141 -1 554 141 13 34 chr2 178105560 178105709 -75150874 + G-rich Low_complexity Low_complexity 4 149 0 349 224 43 93 chr2 178105718 178105879 -75150704 + L1ME LINE L1 5043 5195 -951 913 151 41 0 chr2 178105885 178106057 -75150526 + L1MB3 LINE L1 5996 6174 -9 181 265 20 0 chr2 178106135 178106184 -75150399 - L2 LINE L2 0 3313 3264 375 277 73 22 chr2 178106209 178106346 -75150237 + L1ME LINE L1 5254 5397 -765 816 151 0 36 chr2 178106347 178106513 -75150070 + AluSq SINE Alu 137 296 -17 2287 82 7 0 chr2 178106514 178106817 -75149766 + AluSg SINE Alu 1 305 -5 544 290 140 21 chr2 178106818 178107116 -75149467 + L1ME LINE L1 5389 5741 -380 216 67 0 0 chr2 178107116 178107146 -75149437 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 544 290 140 21 chr2 178107146 178107219 -75149364 + L1ME LINE L1 5741 5804 -317 2240 75 3 28 chr2 178107228 178107547 -75149036 - AluY SINE Alu 0 311 1 2112 98 3 13 chr2 178107728 178108034 -75148549 + AluSc SINE Alu 1 303 -6 2277 91 3 0 chr2 178108272 178108580 -75148003 + AluSp SINE Alu 2 310 -3 2204 121 0 0 chr2 178109309 178109622 -75146961 + AluSq SINE Alu 1 313 0 846 212 52 21 chr2 178110410 178110603 -75145980 - MIR SINE MIR -40 222 24 458 243 69 28 chr2 178110994 178111138 -75145445 - L2 LINE L2 -1 3271 3122 240 246 97 90 chr2 178111390 178111480 -75145103 - MIR SINE MIR 0 262 169 2192 86 3 10 chr2 178111480 178111781 -75144802 + AluSx SINE Alu 2 300 -12 240 246 97 90 chr2 178111781 178111824 -75144759 - MIR SINE MIR -93 169 128 267 208 19 0 chr2 178111954 178112007 -75144576 - MER5B DNA MER1_type 0 178 125 2144 102 7 0 chr2 178112014 178112445 -75144138 + AluY SINE Alu 4 436 0 1600 214 98 109 chr2 178112445 178112987 -75143596 + L1MD2 LINE L1 5680 6214 -145 2143 126 0 0 chr2 178112987 178113297 -75143286 - AluSx SINE Alu -1 311 2 1600 214 98 109 chr2 178113297 178113440 -75143143 + L1MD2 LINE L1 6214 6357 -2 534 186 80 26 chr2 178113444 178113557 -75143026 - MER5B DNA MER1_type -59 119 1 2351 83 3 3 chr2 178113887 178114199 -75142384 + AluSp SINE Alu 2 313 0 1439 209 7 3 chr2 178115781 178116078 -75140505 - AluJo SINE Alu -14 298 1 193 312 55 37 chr2 178116370 178116479 -75140104 + MIR SINE MIR 17 127 -81 1821 142 21 78 chr2 178116634 178116661 -75139922 + L1MB2 LINE L1 5805 5832 -339 2117 104 0 14 chr2 178116661 178116958 -75139625 + AluSq SINE Alu 1 293 -20 1821 142 21 78 chr2 178116958 178117317 -75139266 + L1MB2 LINE L1 5832 6169 -2 2233 83 0 0 chr2 178117344 178117633 -75138950 + AluSc SINE Alu 10 298 -11 2230 78 0 0 chr2 178118287 178118598 -75137985 - AluSq SINE Alu 0 311 1 777 159 76 0 chr2 178118679 178118824 -75137759 + AluSg/x SINE Alu 137 292 -20 2056 104 3 10 chr2 178119034 178119323 -75137260 + AluSx SINE Alu 1 287 -25 21 71 0 0 chr2 178119329 178119371 -75137212 + AT_rich Low_complexity Low_complexity 1 42 0 608 192 50 0 chr2 178120382 178120502 -75136081 + MER3 DNA MER1_type 80 205 -4 1043 213 98 0 chr2 178120881 178121106 -75135477 - MLT1G LTR MaLR 0 590 344 * 3311 116 19 31 chr2 178121102 178121433 -75135150 - LTR39 LTR ERV1 -236 547 223 1954 112 0 20 chr2 178121433 178121728 -75134855 + AluSg SINE Alu 2 290 -20 3311 116 19 31 chr2 178121728 178121913 -75134670 - LTR39 LTR ERV1 -560 223 37 238 305 25 51 chr2 178122075 178122139 -75134444 - LTR67 LTR ERVL -356 201 105 246 143 0 0 chr2 178122139 178122174 -75134409 - MLT1J LTR MaLR -377 134 100 238 305 25 51 chr2 178122174 178122193 -75134390 - LTR67 LTR ERVL -452 105 87 211 162 0 0 chr2 178122387 178122424 -75134159 - L2 LINE L2 -6 3307 3271 246 278 45 62 chr2 178122449 178122625 -75133958 + L2 LINE L2 2227 2399 -915 554 128 23 0 chr2 178122669 178122755 -75133828 + MSTA LTR MaLR 339 426 -2 * 1004 192 73 27 chr2 178122744 178122765 -75133818 + LTR39 LTR ERV1 555 574 -209 1955 149 134 33 chr2 178122765 178122809 -75133774 - MSTA LTR MaLR 0 428 390 1955 114 0 0 chr2 178122809 178123081 -75133502 + AluSg SINE Alu 1 272 -38 1955 149 134 33 chr2 178123081 178123425 -75133158 - MSTA LTR MaLR -38 390 1 1004 192 73 27 chr2 178123425 178123622 -75132961 + LTR39 LTR ERV1 574 783 0 227 206 29 108 chr2 178123791 178123830 -75132753 + LTR67 LTR ERVL 435 475 -82 2275 108 7 0 chr2 178123830 178124136 -75132447 - AluSx SINE Alu -4 308 1 227 206 29 108 chr2 178124136 178124198 -75132385 + LTR67 LTR ERVL 475 528 -29 215 348 109 0 chr2 178125020 178125112 -75131471 + MIR SINE MIR 2 103 -159 1618 176 0 14 chr2 178125674 178125963 -75130620 + AluJb SINE Alu 1 285 -27 193 269 58 0 chr2 178125987 178126039 -75130544 + MIR SINE MIR 79 133 -75 2039 123 0 7 chr2 178126671 178126964 -75129619 - AluSx SINE Alu -21 291 1 4207 163 75 20 chr2 178128020 178129080 -75127503 - L1MB7 LINE L1 0 6184 5040 2089 88 32 3 chr2 178129080 178129363 -75127220 - AluSg SINE Alu -19 291 1 4207 163 75 20 chr2 178129363 178129514 -75127069 - L1MB7 LINE L1 -1144 5040 4899 183 342 99 19 chr2 178129514 178129675 -75126908 + L2 LINE L2 2454 2627 -687 194 259 86 17 chr2 178130140 178130198 -75126385 - L2 LINE L2 -10 3262 3201 188 254 48 63 chr2 178130213 178130276 -75126307 + MIR3 SINE MIR 124 185 -23 685 283 57 30 chr2 178131947 178132177 -75124406 - MIR SINE MIR -20 242 7 25 31 0 0 chr2 178133912 178133944 -75122639 + GC_rich Low_complexity Low_complexity 1 32 0 23 68 0 0 chr2 178133962 178134006 -75122577 + GC_rich Low_complexity Low_complexity 1 44 0 231 36 0 0 chr2 178134228 178134256 -75122327 + (TG)n Simple_repeat Simple_repeat 2 29 0 216 211 11 63 chr2 178135383 178135478 -75121105 + G-rich Low_complexity Low_complexity 5 94 0 189 121 0 0 chr2 178135974 178136007 -75120576 + (CCG)n Simple_repeat Simple_repeat 2 34 0 203 162 27 0 chr2 178136153 178136190 -75120393 + (CCG)n Simple_repeat Simple_repeat 2 39 0 25 31 0 0 chr2 178137112 178137144 -75119439 + AT_rich Low_complexity Low_complexity 1 32 0 2407 78 0 0 chr2 178139819 178140128 -75116455 - AluSc SINE Alu 0 309 1 2096 97 23 0 chr2 178142111 178142411 -75114172 - AluSx SINE Alu -5 307 1 1130 110 0 29 chr2 178143441 178143614 -75112969 + AluSg/x SINE Alu 135 302 -10 1114 121 11 23 chr2 178144032 178144206 -75112377 + MER5A DNA MER1_type 18 189 0 2225 109 3 0 chr2 178144317 178144628 -75111955 + AluSx SINE Alu 1 312 0 2109 90 19 32 chr2 178145664 178145974 -75110609 + AluSx SINE Alu 1 306 -6 426 341 28 17 chr2 178146192 178146371 -75110212 - MER5A DNA MER1_type -2 187 7 244 357 31 0 chr2 178146764 178146862 -75109721 - MIR3 SINE MIR 0 208 108 214 296 0 0 chr2 178146840 178146894 -75109689 - L2 LINE L2 -74 3239 3186 * 296 303 126 0 chr2 178146962 178147081 -75109502 - L2 LINE L2 0 3313 3180 320 253 40 0 chr2 178147125 178147200 -75109383 + L2 LINE L2 3232 3309 -4 2211 207 123 35 chr2 178147795 178148340 -75108243 - MLT1E LTR MaLR 0 593 1 1412 264 57 29 chr2 178148442 178148931 -75107652 + MLT1J LTR MaLR 7 509 -2 449 259 20 61 chr2 178149206 178149353 -75107230 - L2 LINE L2 -1 3312 3172 292 196 0 0 chr2 178149466 178149512 -75107071 + MLT1F LTR MaLR 1 46 -496 292 283 43 0 chr2 178149522 178149614 -75106969 - MLT1J2 LTR MaLR -288 162 67 2175 106 10 0 chr2 178149686 178149987 -75106596 + AluSq SINE Alu 3 306 -7 2103 107 0 3 chr2 178149995 178150293 -75106290 + AluSx SINE Alu 1 297 -15 182 319 0 0 chr2 178150379 178150448 -75106135 - L2 LINE L2 0 3313 3245 * 385 195 24 106 chr2 178150422 178150477 -75106106 + MIR SINE MIR 77 118 -144 279 0 0 0 chr2 178150477 178150508 -75106075 + (TG)n Simple_repeat Simple_repeat 1 31 0 385 195 24 106 chr2 178150508 178150575 -75106008 + MIR SINE MIR 118 189 -73 2183 108 3 61 chr2 178150593 178150953 -75105630 + L1PB1 LINE L1 5812 6150 -1 23 33 0 0 chr2 178150968 178150998 -75105585 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 178151054 178151075 -75105508 + AT_rich Low_complexity Low_complexity 1 21 0 1998 175 11 14 chr2 178151268 178151634 -75104949 + MLT1A1 LTR MaLR 1 365 0 1537 171 25 7 chr2 178151831 178151956 -75104627 + AluJb SINE Alu 1 122 -190 180 0 0 0 chr2 178151956 178151976 -75104607 + (CAAA)n Simple_repeat Simple_repeat 4 23 0 1537 171 25 7 chr2 178151976 178152131 -75104452 + AluJb SINE Alu 122 286 -26 196 200 29 0 chr2 178152696 178152731 -75103852 + MIR SINE MIR 83 118 -90 432 244 159 7 chr2 178153298 178153434 -75103149 + MIR3 SINE MIR 56 205 -3 1561 227 132 123 chr2 178153455 178153944 -75102639 - MLT1G LTR MaLR 0 590 58 5012 116 7 81 chr2 178153957 178154171 -75102412 + MER4D LTR ERV1 1 229 -674 2245 114 0 0 chr2 178154171 178154468 -75102115 + AluSx SINE Alu 6 302 -10 5012 116 7 81 chr2 178154468 178154876 -75101707 + MER4D LTR ERV1 229 558 -345 2385 104 0 0 chr2 178154876 178155184 -75101399 - AluSx SINE Alu -4 308 1 5012 116 7 81 chr2 178155184 178155507 -75101076 + MER4D LTR ERV1 558 903 0 289 257 110 9 chr2 178155784 178155893 -75100690 + MLT1-int LTR MaLR 1227 1346 -25 263 367 53 10 chr2 178156031 178156238 -75100345 - MLT1G-int LTR MaLR -844 527 312 3035 158 46 20 chr2 178156319 178156864 -75099719 + MER89 LTR ERV1 1 559 0 247 191 0 0 chr2 178156910 178156957 -75099626 - MLT1G-int LTR MaLR -1324 47 1 1752 230 83 41 chr2 178156957 178157451 -75099132 - MLT1G LTR MaLR 0 590 94 2227 114 10 7 chr2 178157451 178157759 -75098824 - AluSx SINE Alu -3 309 1 1752 230 83 41 chr2 178157759 178157857 -75098726 - MLT1G LTR MaLR -496 94 2 1487 158 0 128 chr2 178157946 178158282 -75098301 + AluJo SINE Alu 2 294 -8 261 350 26 108 chr2 178158388 178158731 -75097852 - L2 LINE L2 0 3272 2958 666 238 40 22 chr2 178158753 178158976 -75097607 - MER113 DNA MER1_type? -294 227 1 1650 167 27 37 chr2 178159297 178159597 -75096986 - AluJb SINE Alu -15 297 1 226 325 0 38 chr2 178159714 178159794 -75096789 - L2 LINE L2 -542 2772 2696 430 266 23 57 chr2 178160773 178160950 -75095633 - HAL1b LINE L1 -466 882 712 2359 251 45 9 chr2 178160986 178161929 -75094654 - L2 LINE L2 -7 3306 2327 2242 93 0 0 chr2 178161936 178162236 -75094347 - AluSg SINE Alu 0 300 1 594 222 26 46 chr2 178162243 178162396 -75094187 - MLT1F LTR MaLR 0 542 393 262 245 0 0 chr2 178162386 178162439 -75094144 - MER81 DNA DNA -27 87 35 * 1867 132 66 0 chr2 178162765 178163038 -75093545 - AluJb SINE Alu -17 295 5 1816 222 34 12 chr2 178163055 178163465 -75093118 - LTR52 LTR ERVL -2 419 1 1684 213 66 20 chr2 178164018 178164287 -75092296 - MLT1C LTR MaLR 0 467 169 252 59 0 0 chr2 178164287 178164321 -75092262 + (TCTG)n Simple_repeat Simple_repeat 1 34 0 1684 213 66 20 chr2 178164321 178164493 -75092090 - MLT1C LTR MaLR -298 169 6 2021 93 104 0 chr2 178164945 178165225 -75091358 + AluSp SINE Alu 1 309 -4 1963 221 121 74 chr2 178165593 178165768 -75090815 - Charlie2a DNA MER1_type -1656 1206 1041 2086 121 0 3 chr2 178165768 178166058 -75090525 - AluSx SINE Alu -23 289 1 1963 221 121 74 chr2 178166058 178166425 -75090158 - Charlie2a DNA MER1_type -1821 1041 692 791 172 0 0 chr2 178166425 178166541 -75090042 + FLAM_C SINE Alu 1 116 -17 1963 221 121 74 chr2 178166541 178167028 -75089555 - Charlie2a DNA MER1_type -2170 692 79 581 310 60 5 chr2 178167074 178167274 -75089309 - L2 LINE L2 -2007 1307 1097 195 316 66 0 chr2 178167401 178167477 -75089106 + L2 LINE L2 623 703 -2611 * 816 244 37 78 chr2 178167474 178167526 -75089057 - L2 LINE L2 -2230 1084 1031 1694 158 3 46 chr2 178167526 178167829 -75088754 + AluJo SINE Alu 1 290 -22 816 244 37 78 chr2 178167829 178168071 -75088512 - L2 LINE L2 -2283 1031 802 1135 168 31 16 chr2 178168075 178168331 -75088252 - MER33 DNA MER1_type -9 315 56 502 178 0 22 chr2 178168331 178168421 -75088162 + FRAM SINE Alu 77 164 -12 4548 227 41 43 chr2 178168440 178168924 -75087659 + L1ME1 LINE L1 863 1346 -4869 2011 127 46 30 chr2 178168924 178169293 -75087290 - THE1C LTR MaLR 0 375 1 4548 227 41 43 chr2 178169293 178170985 -75085598 + L1ME1 LINE L1 1346 2990 -3225 195 42 0 0 chr2 178171121 178171145 -75085438 + (GAA)n Simple_repeat Simple_repeat 2 25 0 695 257 29 25 chr2 178172361 178172602 -75083981 + L1ME1 LINE L1 2965 3206 -3009 955 194 0 0 chr2 178172603 178172778 -75083805 + FRAM SINE Alu 1 168 0 3885 250 50 123 chr2 178172778 178173926 -75082657 + L1ME1 LINE L1 3204 4434 -1781 771 177 0 0 chr2 178173926 178174039 -75082544 + FLAM_C SINE Alu 2 114 -29 3885 250 50 123 chr2 178174039 178174069 -75082514 + L1ME1 LINE L1 4434 4465 -1750 2424 78 0 0 chr2 178174069 178174364 -75082219 + AluSg1 SINE Alu 1 295 -14 3885 250 50 123 chr2 178174364 178174510 -75082073 + L1ME1 LINE L1 4465 4620 -1595 1703 135 48 45 chr2 178174510 178174643 -75081940 + AluJb SINE Alu 1 132 -180 2354 79 3 23 chr2 178174643 178174947 -75081636 + AluSp SINE Alu 1 298 -15 1703 135 48 45 chr2 178174947 178175110 -75081473 + AluJb SINE Alu 132 301 -11 2392 94 0 3 chr2 178175110 178175419 -75081164 + AluSg SINE Alu 3 310 0 1703 135 48 45 chr2 178175419 178175432 -75081151 + AluJb SINE Alu 301 312 0 3885 250 50 123 chr2 178175432 178175683 -75080900 + L1ME1 LINE L1 4620 4739 -1476 1731 174 10 3 chr2 178175683 178175971 -75080612 - AluJo SINE Alu -22 290 1 3885 250 50 123 chr2 178175971 178176205 -75080378 + L1ME1 LINE L1 4739 4988 -1227 558 133 0 0 chr2 178176205 178176280 -75080303 + AluSq SINE Alu 2 76 -236 2381 74 0 7 chr2 178176280 178176578 -75080005 - AluY SINE Alu -14 297 2 1756 92 0 25 chr2 178176579 178176819 -75079764 + AluSq SINE Alu 68 301 -12 2065 106 0 7 chr2 178176867 178177176 -75079407 + AluSg SINE Alu 1 307 0 762 228 68 58 chr2 178177178 178177338 -75079245 + L1ME1 LINE L1 5013 5170 -1065 2245 100 19 13 chr2 178177338 178177647 -75078936 + AluSq SINE Alu 1 311 -2 762 228 68 58 chr2 178177647 178177828 -75078755 + L1ME1 LINE L1 5170 5348 -887 2124 152 20 26 chr2 178177828 178177933 -75078650 + MER7A DNA MER2_type 2 106 -2932 1873 137 65 0 chr2 178177933 178178210 -75078373 - AluSx SINE Alu -17 295 1 2124 152 20 26 chr2 178178210 178178453 -75078130 + MER7A DNA MER2_type 106 346 0 762 228 68 58 chr2 178178453 178178654 -75077929 + L1ME1 LINE L1 5348 5551 -684 778 75 0 0 chr2 178178659 178178777 -75077806 + AluSp/q SINE Alu 190 307 0 1430 205 39 155 chr2 178178777 178179036 -75077547 + L1ME1 LINE L1 5547 5834 -401 1454 165 119 35 chr2 178179036 178179349 -75077234 - AluJo SINE Alu 0 335 1 1430 205 39 155 chr2 178179349 178179556 -75077027 + L1ME1 LINE L1 5834 5934 -301 2542 65 0 0 chr2 178179556 178179862 -75076721 + AluY SINE Alu 1 306 -5 1430 205 39 155 chr2 178179862 178179986 -75076597 + L1ME1 LINE L1 5934 6071 -164 244 223 86 65 chr2 178180293 178180432 -75076151 - HAL1 LINE L1 -2319 188 47 1213 303 83 57 chr2 178180489 178181001 -75075582 - L2 LINE L2 -610 2704 2162 1244 277 71 45 chr2 178181001 178181481 -75075102 + MLT1H LTR MaLR 1 498 -51 2171 104 0 3 chr2 178181481 178181769 -75074814 - AluSx SINE Alu -2 310 24 1244 277 71 45 chr2 178181769 178181823 -75074760 + MLT1H LTR MaLR 498 549 0 1213 303 83 57 chr2 178181823 178182115 -75074468 - L2 LINE L2 -1152 2162 1879 443 314 203 9 chr2 178182116 178182441 -75074142 - L2 LINE L2 -942 2372 1985 1690 163 3 18 chr2 178182444 178182727 -75073856 + AluJb SINE Alu 1 279 -33 2285 186 74 11 chr2 178182727 178183184 -75073399 - MER66B LTR ERV1 0 486 1 2385 44 20 20 chr2 178183205 178183503 -75073080 + AluY SINE Alu 1 298 -13 441 240 47 23 chr2 178184066 178184195 -75072388 - MER103 DNA DNA 0 166 35 2071 133 0 13 chr2 178184980 178185289 -75071294 - AluJb SINE Alu -7 305 1 27 0 0 0 chr2 178185298 178185325 -75071258 + AT_rich Low_complexity Low_complexity 1 27 0 26 50 0 0 chr2 178185585 178185625 -75070958 + AT_rich Low_complexity Low_complexity 1 40 0 396 171 29 0 chr2 178185625 178185695 -75070888 + MER116 DNA Mariner 9 80 0 362 57 19 0 chr2 178185728 178185781 -75070802 + (TG)n Simple_repeat Simple_repeat 2 55 0 22 35 0 0 chr2 178185799 178185828 -75070755 + AT_rich Low_complexity Low_complexity 1 29 0 229 295 64 0 chr2 178186372 178186450 -75070133 + L1ME4a LINE L1 5636 5718 -403 202 258 34 112 chr2 178186458 178186518 -75070065 + L2 LINE L2 3191 3243 -29 2574 57 0 0 chr2 178186518 178186818 -75069765 - AluY SINE Alu -11 300 1 202 258 34 112 chr2 178186818 178186846 -75069737 + L2 LINE L2 3243 3272 0 263 202 193 9 chr2 178186872 178186981 -75069602 + L1ME4a LINE L1 5754 5882 -239 243 0 0 0 chr2 178187024 178187051 -75069532 + (TA)n Simple_repeat Simple_repeat 2 28 0 269 240 60 10 chr2 178187059 178187159 -75069424 + L1ME4a LINE L1 5967 6071 -50 1316 158 74 49 chr2 178187266 178187550 -75069033 + AluJo SINE Alu 1 291 -21 1285 143 136 52 chr2 178188144 178188378 -75068205 - AluJb SINE Alu -17 295 33 2476 45 0 3 chr2 178188378 178188669 -75067914 + AluY SINE Alu 2 291 -20 1285 143 136 52 chr2 178188669 178188706 -75067877 - AluJb SINE Alu -279 33 1 33 25 0 0 chr2 178189248 178189288 -75067295 + AT_rich Low_complexity Low_complexity 1 40 0 183 123 27 68 chr2 178190106 178190179 -75066404 + (CCCCG)n Simple_repeat Simple_repeat 2 71 0 273 109 0 0 chr2 178190240 178190286 -75066297 + (CCCCCG)n Simple_repeat Simple_repeat 4 49 0 188 325 75 12 chr2 178190968 178191048 -75065535 + MIR3 SINE MIR 88 172 -36 21 0 0 0 chr2 178191286 178191307 -75065276 + AT_rich Low_complexity Low_complexity 1 21 0 790 224 77 11 chr2 178191674 178191857 -75064726 - MIR SINE MIR -67 195 1 22 0 0 0 chr2 178191862 178191884 -75064699 + AT_rich Low_complexity Low_complexity 1 22 0 238 206 82 0 chr2 178192194 178192267 -75064316 - Charlie8 DNA MER1_type -2262 155 77 188 0 74 0 chr2 178192280 178192307 -75064276 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1767 149 3 48 chr2 178192347 178192663 -75063920 - LTR8 LTR ERV1 -389 302 1 301 321 107 27 chr2 178192873 178192985 -75063598 + L2 LINE L2 3138 3258 -14 1773 177 14 0 chr2 178193004 178193292 -75063291 - AluJo SINE Alu -20 292 1 675 312 29 5 chr2 178193626 178193831 -75062752 - MIR SINE MIR -25 237 28 2244 87 0 32 chr2 178193835 178194145 -75062438 - AluY SINE Alu -11 300 1 1831 135 0 18 chr2 178194425 178194706 -75061877 + AluJo SINE Alu 11 286 -26 26 0 0 0 chr2 178194706 178194732 -75061851 + AT_rich Low_complexity Low_complexity 1 26 0 256 241 0 17 chr2 178195043 178195101 -75061482 - LTR16A1 LTR ERVL -11 446 390 2317 87 0 0 chr2 178195660 178195948 -75060635 - AluSx SINE Alu -24 288 1 1186 73 24 12 chr2 178196040 178196205 -75060378 - L1PA14 LINE L1 0 6161 5995 244 97 0 0 chr2 178197406 178197437 -75059146 + U2 snRNA snRNA 5 35 -153 21 82 0 0 chr2 178197785 178197834 -75058749 + AT_rich Low_complexity Low_complexity 1 49 0 511 188 138 31 chr2 178199895 178200055 -75056528 + MER104 DNA MER2_type 1 177 -3 2306 98 0 0 chr2 178200624 178200919 -75055664 + AluSg1 SINE Alu 1 295 -14 216 283 0 54 chr2 178201741 178201832 -75054751 - MER5B DNA MER1_type -88 101 4 456 289 47 13 chr2 178201914 178202063 -75054520 - L2 LINE L2 -1 3312 3159 1437 187 13 62 chr2 178202068 178202373 -75054210 + AluJo SINE Alu 1 290 -22 251 67 44 0 chr2 178202388 178202433 -75054150 + A-rich Low_complexity Low_complexity 2 48 0 581 157 78 0 chr2 178202437 178202539 -75054044 + HY1 scRNA scRNA 1 110 -2 1841 136 32 0 chr2 178202568 178202847 -75053736 + AluSx SINE Alu 23 310 -2 806 217 79 5 chr2 178203584 178203787 -75052796 + MIR SINE MIR 1 218 -44 189 178 0 0 chr2 178204011 178204056 -75052527 + (ATG)n Simple_repeat Simple_repeat 2 46 0 2121 149 53 0 chr2 178204183 178204538 -75052045 + L1MA4 LINE L1 5926 6299 -1 21 0 0 0 chr2 178204539 178204560 -75052023 + AT_rich Low_complexity Low_complexity 1 21 0 369 294 12 0 chr2 178204719 178204804 -75051779 - L2 LINE L2 -20 3252 3167 4698 266 73 37 chr2 178205158 178206302 -75050281 - L1MEc LINE L1 -4362 2034 932 279 0 0 0 chr2 178206302 178206333 -75050250 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 885 163 46 7 chr2 178206333 178206486 -75050097 - FAM SINE Alu -15 160 2 4698 266 73 37 chr2 178206486 178207264 -75049319 - L1MEc LINE L1 -5463 933 43 2036 104 3 26 chr2 178207738 178208047 -75048536 - AluSc SINE Alu -7 302 1 460 219 17 8 chr2 178208048 178208167 -75048416 - L1MC4 LINE L1 -5 8037 7918 430 342 57 31 chr2 178208196 178208218 -75048365 - L1MC4 LINE L1 -101 7941 7921 1997 121 3 19 chr2 178208218 178208531 -75048052 - AluSx SINE Alu 0 312 5 430 342 57 31 chr2 178208531 178208862 -75047721 - L1MC4 LINE L1 -121 7921 7579 426 162 105 89 chr2 178209134 178209325 -75047258 + L1MC5 LINE L1 7734 7927 -34 528 300 317 50 chr2 178209340 178209484 -75047099 + L1M4 LINE L1 2773 2877 -3269 2103 101 3 29 chr2 178209484 178209615 -75046968 + AluSx SINE Alu 1 134 -178 2192 100 0 0 chr2 178209615 178209916 -75046667 + AluSx SINE Alu 1 301 -11 2103 101 3 29 chr2 178209916 178210091 -75046492 + AluSx SINE Alu 134 299 -13 528 300 317 50 chr2 178210091 178210383 -75046200 + L1M4 LINE L1 2877 3262 -2884 2022 47 4 0 chr2 178210719 178211007 -75045576 + AluY SINE Alu 40 328 0 1190 252 160 18 chr2 178212526 178213041 -75043542 - L2 LINE L2 0 3313 2708 403 236 37 94 chr2 178213041 178213338 -75043245 - L1MDa LINE L1 -4813 1267 988 186 43 0 0 chr2 178213338 178213361 -75043222 + (TTCC)n Simple_repeat Simple_repeat 2 24 0 1945 136 10 3 chr2 178213368 178213677 -75042906 - AluSx SINE Alu -1 311 1 276 335 54 0 chr2 178213708 178213893 -75042690 - L1MDa LINE L1 -5094 976 782 1627 175 14 0 chr2 178214262 178214548 -75042035 - AluJb SINE Alu -22 290 1 1738 164 3 0 chr2 178214631 178214917 -75041666 - AluJb SINE Alu -25 287 1 1854 164 0 3 chr2 178215695 178216007 -75040576 - AluJb SINE Alu -1 311 1 2083 124 20 0 chr2 178216786 178217092 -75039491 + AluSx SINE Alu 1 312 0 792 262 69 0 chr2 178218378 178218580 -75038003 - MIR SINE MIR -28 234 19 766 188 0 8 chr2 178218628 178218761 -75037822 - FLAM_C SINE Alu -1 132 1 356 245 114 65 chr2 178218774 178218958 -75037625 + L2 LINE L2 3120 3312 -1 1948 139 54 94 chr2 178219099 178219506 -75037077 - MSTB1 LTR MaLR 0 432 45 1649 189 0 19 chr2 178219506 178219824 -75036759 - AluJo SINE Alu 0 312 1 1948 139 54 94 chr2 178219824 178219868 -75036715 - MSTB1 LTR MaLR -387 45 1 2225 84 0 3 chr2 178221071 178221386 -75035197 - AluSq SINE Alu 0 314 1 249 347 171 26 chr2 178221386 178221887 -75034696 - L2 LINE L2 -10 3262 2686 619 274 63 38 chr2 178221904 178222141 -75034442 - MER112 DNA MER1_type -12 248 6 2328 173 33 51 chr2 178222426 178222935 -75033648 - MLT1D LTR MaLR 0 505 6 302 317 87 45 chr2 178222940 178223205 -75033378 - L2 LINE L2 -1005 2309 2034 631 266 104 39 chr2 178223209 178223716 -75032867 + MLT1L LTR MaLR 1 613 -2 367 300 67 18 chr2 178223731 178223954 -75032629 - L2 LINE L2 -1293 2021 1788 1058 148 62 29 chr2 178224025 178224235 -75032348 + AluJb SINE Alu 84 300 -12 782 286 67 8 chr2 178224266 178224504 -75032079 - MIR SINE MIR -1 261 10 1752 159 3 3 chr2 178224744 178225040 -75031543 - AluJo SINE Alu -16 296 1 293 241 152 45 chr2 178225517 178225629 -75030954 + MLT1L LTR MaLR 121 244 -371 273 202 67 92 chr2 178225645 178225764 -75030819 + MLT1L LTR MaLR 259 471 -137 308 257 7 99 chr2 178226010 178226162 -75030421 + L1ME4a LINE L1 5978 6115 -6 2782 157 41 0 chr2 178226164 178226654 -75029929 - L1MB3 LINE L1 -2 6181 5672 2091 125 3 0 chr2 178227554 178227859 -75028724 - AluSx SINE Alu -4 308 3 1429 167 3 61 chr2 178228062 178228356 -75028227 + AluJb SINE Alu 1 277 -35 310 146 0 0 chr2 178228357 178228405 -75028178 - Alu SINE Alu -254 48 1 1899 237 161 65 chr2 178228405 178229061 -75027522 - L2 LINE L2 -239 3074 2319 2161 116 3 0 chr2 178229061 178229372 -75027211 + AluSx SINE Alu 1 312 0 1899 237 161 65 chr2 178229372 178229584 -75026999 - L2 LINE L2 -994 2319 2129 2105 85 14 7 chr2 178229949 178230242 -75026341 - AluSx SINE Alu -17 295 1 218 303 114 53 chr2 178230498 178230630 -75025953 - MIR3 SINE MIR -9 199 60 278 276 95 9 chr2 178230644 178230760 -75025823 + MIR SINE MIR 16 141 -67 1904 135 0 7 chr2 178231036 178231339 -75025244 - AluSx SINE Alu -5 307 7 557 139 16 4 chr2 178231400 178231495 -75025088 + MSTB LTR MaLR 1 96 -332 277 149 0 0 chr2 178233877 178233924 -75022659 + L2 LINE L2 3263 3309 -4 239 224 20 0 chr2 178235767 178235816 -75020767 + G-rich Low_complexity Low_complexity 1 50 0 225 0 0 0 chr2 178238562 178238587 -75017996 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 381 274 6 76 chr2 178240030 178240187 -75016396 + MIR SINE MIR 67 212 -50 237 65 0 0 chr2 178242910 178242941 -75013642 + (CCCCCA)n Simple_repeat Simple_repeat 4 34 0 378 0 0 0 chr2 178243649 178243691 -75012892 + (CA)n Simple_repeat Simple_repeat 2 43 0 267 237 134 0 chr2 178244179 178244200 -75012383 + Charlie8 DNA MER1_type 38 55 -2362 282 56 0 0 chr2 178244200 178244236 -75012347 + (TG)n Simple_repeat Simple_repeat 2 37 0 267 237 134 0 chr2 178244236 178244311 -75012272 + Charlie8 DNA MER1_type 55 147 -2270 389 329 58 52 chr2 178244365 178244384 -75012199 - MER91A DNA MER1_type -36 160 143 1698 157 0 30 chr2 178244384 178244689 -75011894 + AluJo SINE Alu 11 306 -6 389 329 58 52 chr2 178244689 178244824 -75011759 - MER91A DNA MER1_type -53 143 5 207 273 0 0 chr2 178244853 178244897 -75011686 + (CA)n Simple_repeat Simple_repeat 2 45 0 2234 100 0 3 chr2 178245555 178245855 -75010728 + AluSx SINE Alu 1 299 -13 301 290 22 65 chr2 178246978 178247116 -75009467 + L2 LINE L2 3179 3310 -3 250 257 40 0 chr2 178247291 178247392 -75009191 + CT-rich Low_complexity Low_complexity 3 107 0 230 142 61 14 chr2 178247410 178247558 -75009025 + CT-rich Low_complexity Low_complexity 3 157 0 300 159 22 50 chr2 178247592 178247774 -75008809 + CT-rich Low_complexity Low_complexity 4 180 0 269 342 51 0 chr2 178249320 178249437 -75007146 - L3 LINE CR1 -76 1501 1379 811 150 0 0 chr2 178250165 178250285 -75006298 + AluJb SINE Alu 1 120 -192 369 0 0 0 chr2 178250287 178250328 -75006255 + (TG)n Simple_repeat Simple_repeat 2 42 0 227 181 42 0 chr2 178250328 178250400 -75006183 + (TA)n Simple_repeat Simple_repeat 1 75 0 319 221 44 71 chr2 178250405 178250518 -75006065 + L1MCa LINE L1 1954 2063 -4363 868 146 119 0 chr2 178250518 178250669 -75005914 + AluJb SINE Alu 125 293 -19 2171 187 47 9 chr2 178250831 178251281 -75005302 - MLT1C LTR MaLR 0 467 1 360 164 0 0 chr2 178251330 178251397 -75005186 + (CA)n Simple_repeat Simple_repeat 2 68 0 226 273 0 0 chr2 178251876 178251942 -75004641 - MARNA DNA Mariner -306 280 215 1547 178 40 10 chr2 178252420 178252723 -75003860 + AluSx SINE Alu 1 312 0 960 200 109 68 chr2 178253261 178253455 -75003128 - L1MC5 LINE L1 -26 7935 7750 2189 87 3 23 chr2 178253455 178253764 -75002819 - AluSq SINE Alu -10 303 1 960 200 109 68 chr2 178253764 178254038 -75002545 - L1MC5 LINE L1 -211 7750 7448 181 176 59 59 chr2 178255002 178255053 -75001530 + L3b LINE CR1 1376 1426 -157 2196 124 3 0 chr2 178258025 178258323 -74998260 + AluSx SINE Alu 1 299 -13 396 296 38 8 chr2 178258745 178258877 -74997706 + MIR SINE MIR 53 188 -74 340 264 13 88 chr2 178259163 178259322 -74997261 - MLT1J LTR MaLR -139 372 226 242 93 0 23 chr2 178259322 178259365 -74997218 + (GGGA)n Simple_repeat Simple_repeat 4 45 0 350 256 118 67 chr2 178259365 178259603 -74996980 - MLT1J LTR MaLR -261 250 1 806 151 0 8 chr2 178260112 178260238 -74996345 + FLAM_C SINE Alu 3 127 -16 23 54 0 0 chr2 178260238 178260275 -74996308 + AT_rich Low_complexity Low_complexity 1 37 0 252 321 28 18 chr2 178260583 178260692 -74995891 + L2 LINE L2 3162 3271 -1 21 0 0 0 chr2 178262312 178262333 -74994250 + AT_rich Low_complexity Low_complexity 1 21 0 348 339 58 23 chr2 178262397 178262568 -74994015 - L3b LINE CR1 -10 1573 1397 1455 135 5 9 chr2 178263089 178263304 -74993279 - AluJo SINE Alu 0 312 99 1834 153 14 7 chr2 178265416 178265710 -74990873 + AluJb SINE Alu 1 296 -16 694 243 5 39 chr2 178265981 178266187 -74990396 + L2 LINE L2 3102 3300 -13 201 74 0 0 chr2 178266187 178266214 -74990369 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 2360 100 7 0 chr2 178266908 178267218 -74989365 + AluSq SINE Alu 1 312 -1 842 134 0 0 chr2 178268259 178268378 -74988205 + FLAM_C SINE Alu 1 119 -14 198 0 0 0 chr2 178268383 178268405 -74988178 + (CAAT)n Simple_repeat Simple_repeat 3 24 0 238 224 0 0 chr2 178268720 178268769 -74987814 - L2 LINE L2 0 3313 3265 835 259 86 25 chr2 178268900 178269308 -74987275 - L2 LINE L2 -98 3215 2771 2007 133 23 3 chr2 178269430 178269730 -74986853 + AluSx SINE Alu 1 306 -6 726 273 11 0 chr2 178270747 178270930 -74985653 + MIR SINE MIR 2 186 -76 605 279 149 0 chr2 178270930 178271131 -74985452 - MIR SINE MIR -30 232 2 2582 52 0 16 chr2 178273087 178273397 -74983186 - AluY SINE Alu -6 305 1 23 0 0 0 chr2 178273742 178273765 -74982818 + AT_rich Low_complexity Low_complexity 1 23 0 2155 121 10 0 chr2 178273895 178274200 -74982383 - AluSq SINE Alu -5 308 1 2105 142 7 0 chr2 178274285 178274588 -74981995 + AluSx SINE Alu 1 305 -7 772 223 201 4 chr2 178275155 178275194 -74981389 - MER5C DNA MER1_type 0 324 294 180 0 0 0 chr2 178275194 178275214 -74981369 + (TTG)n Simple_repeat Simple_repeat 2 21 0 772 223 201 4 chr2 178275214 178275443 -74981140 - MER5C DNA MER1_type -30 294 3 922 133 0 0 chr2 178276156 178276284 -74980299 + FLAM_C SINE Alu 1 128 -5 391 304 0 9 chr2 178276488 178276603 -74979980 - L2 LINE L2 -16 3297 3184 292 233 0 14 chr2 178278033 178278106 -74978477 - L2 LINE L2 0 3313 3242 22 0 0 0 chr2 178279799 178279821 -74976762 + AT_rich Low_complexity Low_complexity 1 22 0 1838 176 0 0 chr2 178280022 178280306 -74976277 + AluJb SINE Alu 1 284 -28 357 24 0 0 chr2 178280624 178280666 -74975917 + (TG)n Simple_repeat Simple_repeat 1 42 0 222 37 0 0 chr2 178280665 178280692 -74975891 + (GA)n Simple_repeat Simple_repeat 1 27 0 * 2047 95 4 0 chr2 178280698 178280962 -74975621 - AluSc SINE Alu -44 265 1 2861 208 47 36 chr2 178281619 178282363 -74974220 - L1ME1 LINE L1 -3 6163 5412 1808 169 6 10 chr2 178282570 178282883 -74973700 + AluJo SINE Alu 1 312 0 2027 161 3 3 chr2 178282911 178283215 -74973368 - AluJo SINE Alu -8 304 1 266 187 55 44 chr2 178283464 178283555 -74973028 - L1ME3A LINE L1 -219 6020 5929 931 274 81 25 chr2 178283712 178284559 -74972024 - L1ME3A LINE L1 -301 5942 5040 1051 255 74 104 chr2 178284600 178284807 -74971776 - L1ME3A LINE L1 -1488 4727 4515 1916 156 3 3 chr2 178284807 178285102 -74971481 - AluJb SINE Alu -13 299 5 1051 255 74 104 chr2 178285102 178285717 -74970866 - L1ME3A LINE L1 -1700 4515 3930 735 252 63 75 chr2 178285732 178286092 -74970491 - L1ME3A LINE L1 -2691 3524 3172 2326 78 0 38 chr2 178286092 178286411 -74970172 - AluY SINE Alu -4 307 1 735 252 63 75 chr2 178286411 178286609 -74969974 - L1ME3A LINE L1 -3043 3172 2973 538 271 62 60 chr2 178286581 178286891 -74969692 - L1MEc LINE L1 -3618 2597 2310 * 1810 137 88 0 chr2 178286891 178287176 -74969407 - AluJo SINE Alu 0 312 3 538 271 62 60 chr2 178287176 178287445 -74969138 - L1MEc LINE L1 -3905 2310 2043 535 345 68 17 chr2 178288185 178288420 -74968163 + MLT1K LTR MaLR 3 249 -339 918 112 24 0 chr2 178288462 178288587 -74967996 + MSTB LTR MaLR 272 399 -27 590 90 0 0 chr2 178288616 178288694 -74967889 + MSTB LTR MaLR 1 78 -348 288 0 0 0 chr2 178288887 178288919 -74967664 + (GGGTG)n Simple_repeat Simple_repeat 4 35 0 2418 88 0 0 chr2 178288933 178289230 -74967353 - AluSx SINE Alu -15 297 1 1962 91 7 101 chr2 178289764 178290072 -74966511 - AluSx SINE Alu -33 279 1 1996 151 3 7 chr2 178290075 178290380 -74966203 - AluJo SINE Alu -8 304 1 1369 146 4 17 chr2 178290860 178291099 -74965484 - L1MA7 LINE L1 0 6291 6056 845 126 0 0 chr2 178291296 178291407 -74965176 + FLAM_C SINE Alu 12 122 -21 196 151 19 38 chr2 178291672 178291725 -74964858 + GA-rich Low_complexity Low_complexity 1 52 0 252 204 41 61 chr2 178292649 178292747 -74963836 + MLT2C1 LTR ERVL 110 205 -192 * 1140 251 148 43 chr2 178292663 178292821 -74963762 + MLT1E2 LTR MaLR 111 251 -375 2591 47 3 0 chr2 178292821 178293119 -74963464 + AluY SINE Alu 1 299 -12 1140 251 148 43 chr2 178293119 178293426 -74963157 + MLT1E2 LTR MaLR 251 625 -1 1389 183 12 16 chr2 178293509 178293761 -74962822 + AluJb SINE Alu 39 289 -23 984 161 12 0 chr2 178294972 178295134 -74961449 + FRAM SINE Alu 13 176 0 545 312 132 51 chr2 178295246 178295739 -74960844 + L3 LINE CR1 847 1379 -198 773 203 106 23 chr2 178295752 178295969 -74960614 - MIR SINE MIR 0 262 28 191 286 18 0 chr2 178296045 178296101 -74960482 + L3 LINE CR1 1498 1554 -23 1689 146 31 0 chr2 178296485 178296745 -74959838 - AluJo SINE Alu -44 268 1 1654 157 31 89 chr2 178297387 178297624 -74958959 - MLT1B LTR MaLR 0 390 186 2413 86 0 10 chr2 178297624 178297926 -74958657 - AluSq SINE Alu -14 299 1 1654 157 31 89 chr2 178297926 178298102 -74958481 - MLT1B LTR MaLR -204 186 1 1677 167 11 14 chr2 178298195 178298477 -74958106 + AluJb SINE Alu 16 296 -16 2299 110 10 0 chr2 178298479 178298827 -74957756 + AluSx SINE Alu 1 351 0 684 242 81 5 chr2 178298863 178299086 -74957497 + LTR16C LTR ERVL 252 491 0 1723 167 39 23 chr2 178301123 178301429 -74955154 + AluJo SINE Alu 1 311 -1 853 69 0 58 chr2 178301431 178301462 -74955121 + (GGGAA)n Simple_repeat Simple_repeat 1 192 0 853 69 0 58 chr2 178301462 178301635 -74954948 + (GGGAA)n Simple_repeat Simple_repeat 2 164 0 1281 113 5 15 chr2 178302165 178302368 -74954215 - L1PB1 LINE L1 0 6151 5951 2182 210 54 24 chr2 178302523 178303007 -74953576 + MLT1F1 LTR MaLR 2 505 -62 2271 122 0 0 chr2 178303007 178303318 -74953265 - AluSx SINE Alu -1 311 1 2182 210 54 24 chr2 178303318 178303367 -74953216 + MLT1F1 LTR MaLR 505 551 -16 5213 126 17 15 chr2 178305255 178306072 -74950511 + L1PA16 LINE L1 5347 6165 -1 524 241 217 98 chr2 178306173 178306630 -74949953 + MLT1K LTR MaLR 76 586 -2 238 255 0 75 chr2 178306630 178306724 -74949859 - MIR SINE MIR -115 147 61 336 375 82 4 chr2 178306789 178306931 -74949652 - L3 LINE CR1 -821 756 627 1580 193 44 3 chr2 178306931 178307227 -74949356 + AluJo SINE Alu 1 308 -4 336 375 82 4 chr2 178307227 178307327 -74949256 - L3 LINE CR1 -950 627 495 458 236 207 0 chr2 178307336 178307476 -74949107 + MER5A DNA MER1_type 9 177 -12 196 368 47 0 chr2 178307554 178307660 -74948923 - L3 LINE CR1 -1163 414 304 180 365 94 10 chr2 178307802 178307898 -74948685 - L3 LINE CR1 -1410 167 64 398 313 141 10 chr2 178308092 178308284 -74948299 - L1MC/D LINE L1 -2182 5626 5410 1062 320 109 8 chr2 178308306 178308799 -74947784 - L2 LINE L2 0 3313 2773 305 138 0 17 chr2 178308830 178308888 -74947695 + (TCCC)n Simple_repeat Simple_repeat 2 58 0 1914 145 14 0 chr2 178308888 178309185 -74947398 - AluSx SINE Alu -3 309 9 428 265 73 7 chr2 178309194 178309345 -74947238 - L2 LINE L2 -537 2777 2617 240 242 0 0 chr2 178359410 178359505 -74897078 + G-rich Low_complexity Low_complexity 1 95 0 211 329 0 0 chr2 178359518 178359591 -74896992 + G-rich Low_complexity Low_complexity 1 73 0 2324 64 3 3 chr2 178359716 178360021 -74896562 + AluY SINE Alu 1 305 0 275 289 67 15 chr2 178360058 178360193 -74896390 + L1ME3A LINE L1 5977 6118 -52 358 218 141 26 chr2 178360228 178360384 -74896199 - MER104 DNA MER2_type -3 177 4 2099 130 0 34 chr2 178360540 178360863 -74895720 - AluSx SINE Alu 0 312 1 1136 153 13 61 chr2 178360916 178361026 -74895557 - AluJo SINE Alu -90 222 127 351 78 0 0 chr2 178361026 178361077 -74895506 + (TTA)n Simple_repeat Simple_repeat 2 52 0 1136 153 13 61 chr2 178361077 178361194 -74895389 - AluJo SINE Alu -185 127 6 674 147 0 28 chr2 178361399 178361576 -74895007 + (G)n Simple_repeat Simple_repeat 1 172 0 371 210 94 91 chr2 178362400 178362686 -74893897 + L1ME4a LINE L1 5601 5887 -234 207 0 0 0 chr2 178362699 178362722 -74893861 + (TA)n Simple_repeat Simple_repeat 1 23 0 2289 88 7 3 chr2 178362723 178363018 -74893565 - AluSx SINE Alu -16 296 1 1810 188 0 0 chr2 178363189 178363487 -74893096 - AluJo SINE Alu -14 298 1 1070 153 0 25 chr2 178363591 178363754 -74892829 - AluJb SINE Alu -21 291 133 448 289 13 19 chr2 178365121 178365277 -74891306 + MER5B DNA MER1_type 1 155 -23 313 282 128 0 chr2 178365330 178365447 -74891136 + MER5B DNA MER1_type 46 177 -1 22 0 0 0 chr2 178365572 178365594 -74890989 + AT_rich Low_complexity Low_complexity 1 22 0 1788 139 0 0 chr2 178365609 178365853 -74890730 + AluSx SINE Alu 39 282 -30 475 325 0 0 chr2 178366164 178366284 -74890299 - MIR SINE MIR -119 143 24 21 0 0 0 chr2 178366313 178366334 -74890249 + AT_rich Low_complexity Low_complexity 1 21 0 227 327 69 0 chr2 178366798 178366899 -74889684 + L3b LINE CR1 1284 1391 -192 599 245 92 66 chr2 178367309 178367582 -74889001 + MLT1J LTR MaLR 232 511 0 25 0 0 0 chr2 178367688 178367713 -74888870 + AT_rich Low_complexity Low_complexity 1 25 0 271 311 30 55 chr2 178368596 178368760 -74887823 + MIR3 SINE MIR 46 205 -3 1196 155 22 13 chr2 178368824 178369050 -74887533 - L1MA9 LINE L1 0 6312 6085 281 220 175 30 chr2 178369080 178369280 -74887303 - L1ME4a LINE L1 -43 6078 5850 805 183 8 0 chr2 178369281 178369407 -74887176 + FLAM_C SINE Alu 1 127 -16 473 244 123 83 chr2 178369433 178369776 -74886807 - L1ME4a LINE L1 -152 5969 5579 2135 125 3 6 chr2 178369776 178370087 -74886496 - AluJb SINE Alu -2 310 1 473 244 123 83 chr2 178370087 178370267 -74886316 - L1ME4a LINE L1 -542 5579 5407 858 232 43 4 chr2 178372210 178372443 -74884140 + MIR SINE MIR 2 243 -19 666 218 91 10 chr2 178372900 178373154 -74883429 + HsTC2 DNA Tc2 1 320 -1578 * 726 207 16 31 chr2 178373150 178373343 -74883240 + HsTC2 DNA Tc2 1705 1894 -4 29 31 0 31 chr2 178373453 178373470 -74883113 + AT_rich Low_complexity Low_complexity 1 17 -46 2281 90 0 23 chr2 178373470 178373771 -74882812 - AluSp SINE Alu -19 294 1 29 31 0 31 chr2 178373771 178373794 -74882789 + AT_rich Low_complexity Low_complexity 17 39 -24 2214 117 0 0 chr2 178373794 178374085 -74882498 + AluSq SINE Alu 1 291 -22 29 31 0 31 chr2 178374085 178374108 -74882475 + AT_rich Low_complexity Low_complexity 39 63 0 2071 104 0 87 chr2 178374223 178374558 -74882025 + AluSq SINE Alu 1 306 -7 1415 143 179 0 chr2 178375349 178375600 -74880983 - AluJb SINE Alu -5 297 2 709 280 67 14 chr2 178376172 178376529 -74880054 + L1ME4a LINE L1 5551 5926 -195 591 234 0 36 chr2 178376530 178376667 -74879916 - FLAM_A SINE Alu -1 132 1 2618 46 0 0 chr2 178376824 178377127 -74879456 - AluY SINE Alu -8 303 1 1864 137 23 17 chr2 178377158 178377457 -74879126 + AluJb SINE Alu 1 301 -11 259 350 38 38 chr2 178377635 178377795 -74878788 - MIR SINE MIR -56 206 47 425 219 0 38 chr2 178378100 178378205 -74878378 - LTR33A LTR ERVL -3 520 420 731 230 97 31 chr2 178378250 178378446 -74878137 + LTR33 LTR ERVL 25 233 -288 433 246 142 22 chr2 178378509 178378643 -74877940 - LTR33A LTR ERVL -303 220 71 1794 160 0 21 chr2 178378731 178379018 -74877565 - AluJo SINE Alu -17 295 15 2397 106 3 0 chr2 178379044 178379355 -74877228 - AluSx SINE Alu 0 312 1 302 304 133 0 chr2 178379358 178379493 -74877090 - L1ME3A LINE L1 -224 5946 5794 216 67 0 0 chr2 178379664 178379694 -74876889 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 273 248 48 57 chr2 178379702 178379807 -74876776 - L2 LINE L2 -1 3312 3209 432 291 86 84 chr2 178379876 178380242 -74876341 + L1M4 LINE L1 3681 4050 -2096 1648 158 6 87 chr2 178380242 178380565 -74876018 + AluJb SINE Alu 1 297 -15 432 291 86 84 chr2 178380565 178380603 -74875980 + L1M4 LINE L1 4050 4086 -2060 21 57 0 0 chr2 178380950 178380985 -74875598 + AT_rich Low_complexity Low_complexity 1 35 0 1934 168 0 3 chr2 178381054 178381352 -74875231 + AluSx SINE Alu 1 297 -15 908 191 9 9 chr2 178382192 178382407 -74874176 - L1M4 LINE L1 -945 5201 4987 1121 151 22 0 chr2 178383310 178383495 -74873088 - L1P LINE L1 -3268 2878 2690 * 6548 69 3 9 chr2 178383491 178384348 -74872235 + L1PA10 LINE L1 5317 6168 0 1996 136 7 0 chr2 178384438 178384732 -74871851 + AluJb SINE Alu 1 296 -16 2210 86 7 17 chr2 178384930 178385222 -74871361 + AluSg1 SINE Alu 1 289 -20 22 103 0 0 chr2 178385246 178385324 -74871259 + AT_rich Low_complexity Low_complexity 1 78 0 3968 201 66 42 chr2 178385328 178385739 -74870844 - L1MB5 LINE L1 -36 6138 5738 2049 117 0 52 chr2 178385739 178386048 -74870535 - AluSx SINE Alu -19 293 1 3968 201 66 42 chr2 178386048 178386474 -74870109 - L1MB5 LINE L1 -436 5738 5323 1766 177 16 32 chr2 178386474 178386790 -74869793 - AluJo SINE Alu -1 311 1 3968 201 66 42 chr2 178386790 178387317 -74869266 - L1MB5 LINE L1 -851 5323 4705 1328 199 125 8 chr2 178387317 178387573 -74869010 - AluJo SINE Alu -25 287 2 3968 201 66 42 chr2 178387573 178387941 -74868642 - L1MB5 LINE L1 -1469 4705 4347 825 204 106 79 chr2 178388037 178388363 -74868220 - L1M4 LINE L1 -904 5242 4903 2290 99 7 0 chr2 178388363 178388657 -74867926 - AluSg SINE Alu -14 296 1 825 204 106 79 chr2 178388657 178388698 -74867885 - L1M4 LINE L1 -1243 4903 4865 1256 191 20 29 chr2 178389178 178389424 -74867159 - L1ME LINE L1 -455 5711 5468 334 82 61 0 chr2 178389426 178389475 -74867108 - AluSx SINE Alu -9 293 242 1032 105 6 62 chr2 178389475 178389637 -74866946 - AluSx SINE Alu -159 153 1 490 314 44 9 chr2 178389656 178389882 -74866701 + MER102b DNA MER1_type 108 341 0 2574 133 61 21 chr2 178389886 178390314 -74866269 + LTR26B LTR ERV1 1 445 -86 4223 141 42 52 chr2 178390317 178391777 -74864806 - LTR12 LTR ERV1 0 2438 35 409 186 10 82 chr2 178391777 178391835 -74864748 + LTR26B LTR ERV1 442 492 -39 8263 51 13 3 chr2 178391835 178392831 -74863752 + LTR13 LTR ERVK 1 1006 -1 409 186 10 82 chr2 178392831 178392869 -74863714 + LTR26B LTR ERV1 492 531 0 3889 191 88 69 chr2 178393000 178394087 -74862496 - LTR28 LTR ERV1 0 1735 2 3301 145 60 7 chr2 178394550 178395129 -74861454 - MER4B LTR ERV1 0 610 1 180 0 0 0 chr2 178395392 178395412 -74861171 + (A)n Simple_repeat Simple_repeat 1 20 0 2159 105 0 7 chr2 178395477 178395762 -74860821 + AluSc SINE Alu 1 283 -26 24 0 0 0 chr2 178395762 178395786 -74860797 + AT_rich Low_complexity Low_complexity 1 24 0 1545 213 23 6 chr2 178395893 178396241 -74860342 + L1M4 LINE L1 4856 5209 -937 * 2866 194 52 119 chr2 178396238 178396392 -74860191 + L1MC3 LINE L1 6716 6879 -906 534 160 10 0 chr2 178396392 178396492 -74860091 + L1MB3 LINE L1 6076 6176 -7 2866 194 52 119 chr2 178396492 178396782 -74859801 + L1MC3 LINE L1 6879 7187 -598 1842 124 7 21 chr2 178396782 178397065 -74859518 - AluSg SINE Alu -2 308 30 2027 146 7 3 chr2 178397065 178397367 -74859216 - AluJb SINE Alu -5 307 5 236 121 35 86 chr2 178397369 178397427 -74859156 + MLT1F1 LTR MaLR 22 76 -491 2866 194 52 119 chr2 178397427 178397707 -74858876 + L1MC3 LINE L1 7187 7406 -379 2061 139 3 7 chr2 178397707 178398016 -74858567 + AluSx SINE Alu 1 308 -4 2866 194 52 119 chr2 178398016 178398350 -74858233 + L1MC3 LINE L1 7406 7761 -24 792 118 0 8 chr2 178398350 178398469 -74858114 + FLAM_C SINE Alu 1 118 -15 282 260 260 0 chr2 178398719 178398865 -74857718 - MER5A DNA MER1_type -5 184 1 5799 172 103 133 chr2 178398888 178400696 -74855887 - MER52A LTR ERV1 0 1755 1 423 248 60 0 chr2 178400716 178400833 -74855750 - L2 LINE L2 0 3313 3190 1108 149 154 0 chr2 178401215 178401416 -74855167 + MER46A DNA MER2_type 1 232 -4 1656 169 58 0 chr2 178401475 178401736 -74854847 + AluSx SINE Alu 1 276 -36 288 111 0 0 chr2 178401752 178401797 -74854786 + (GGGGA)n Simple_repeat Simple_repeat 2 46 0 1834 157 13 7 chr2 178402452 178402757 -74853826 + AluJb SINE Alu 1 307 -5 691 133 16 8 chr2 178402792 178402920 -74853663 + GA-rich Low_complexity Low_complexity 4 132 0 249 318 6 89 chr2 178403050 178403229 -74853354 - L2 LINE L2 -240 3032 2869 31 0 0 0 chr2 178403629 178403660 -74852923 + AT_rich Low_complexity Low_complexity 1 31 0 246 186 114 84 chr2 178403707 178403874 -74852709 - L1ME4a LINE L1 -69 6052 5881 236 270 45 0 chr2 178404103 178404192 -74852391 - L1MC5 LINE L1 -520 7441 7349 2256 103 7 3 chr2 178407818 178408110 -74848473 + AluSq SINE Alu 1 293 -20 228 339 68 11 chr2 178408171 178408348 -74848235 - L1ME4a LINE L1 -1910 5898 5712 278 275 152 14 chr2 178408479 178408617 -74847966 - L1ME4a LINE L1 -1 6120 5964 2089 79 57 4 chr2 178410120 178410429 -74846154 - AluSq SINE Alu 0 313 5 2036 132 0 0 chr2 178410595 178410910 -74845673 - AluSx SINE Alu 0 312 1 2092 139 0 0 chr2 178411132 178411426 -74845157 - AluSx SINE Alu -17 295 2 1894 135 26 10 chr2 178411445 178411748 -74844835 - AluJb SINE Alu -4 308 1 1677 186 27 3 chr2 178412097 178412392 -74844191 - AluJo SINE Alu -10 302 1 516 189 55 63 chr2 178412545 178412672 -74843911 + FLAM_A SINE Alu 1 126 -7 417 147 13 13 chr2 178412675 178412750 -74843833 + AluJo/FRAM SINE Alu 196 270 -42 31 44 0 0 chr2 178412754 178412799 -74843784 + AT_rich Low_complexity Low_complexity 1 45 0 2357 82 3 0 chr2 178412799 178413093 -74843490 + AluSx SINE Alu 1 295 -17 1489 197 30 0 chr2 178413093 178413362 -74843221 - AluJb SINE Alu -24 288 12 614 213 39 0 chr2 178413396 178413523 -74843060 + FLAM_A SINE Alu 2 133 0 214 200 0 22 chr2 178413525 178413570 -74843013 + GA-rich Low_complexity Low_complexity 2 45 0 699 229 7 0 chr2 178413572 178413712 -74842871 + FLAM_C SINE Alu 3 143 0 252 300 42 34 chr2 178413780 178413902 -74842681 + MIR SINE MIR 44 165 -65 265 314 38 0 chr2 178413984 178414089 -74842494 + MIR SINE MIR 148 256 -6 329 229 10 21 chr2 178414547 178414597 -74841986 - MIR3 SINE MIR -38 170 120 2050 106 11 7 chr2 178414597 178414881 -74841702 + AluSq SINE Alu 15 299 -14 329 229 10 21 chr2 178414881 178414926 -74841657 - MIR3 SINE MIR -88 120 76 1244 193 118 16 chr2 178415321 178415627 -74840956 + MER44D DNA MER2_type 2 608 -1 253 258 211 37 chr2 178416611 178416801 -74839782 + MER112 DNA MER1_type 38 260 0 21 36 0 0 chr2 178417117 178417145 -74839438 + AT_rich Low_complexity Low_complexity 1 28 0 314 169 108 15 chr2 178417309 178417374 -74839209 - L1ME3A LINE L1 -34 6136 6066 2179 242 72 34 chr2 178417427 178418082 -74838501 - L1ME3A LINE L1 -195 5975 5268 3917 157 49 10 chr2 178418082 178418801 -74837782 - L1MB7 LINE L1 -10 6174 5428 2179 242 72 34 chr2 178418801 178419103 -74837480 - L1ME3A LINE L1 -902 5268 4979 535 323 18 13 chr2 178419285 178419511 -74837072 - MIR SINE MIR -10 252 26 1816 172 0 10 chr2 178419546 178419848 -74836735 - AluJo SINE Alu -13 299 1 241 167 0 67 chr2 178420913 178420973 -74835610 - MER117 DNA MER1_type -131 66 11 968 205 3 123 chr2 178421052 178421394 -74835189 + AluJo SINE Alu 2 302 0 1563 176 37 4 chr2 178421878 178422175 -74834408 - AluJo SINE Alu 0 306 1 2062 116 0 29 chr2 178422522 178422832 -74833751 + AluSx SINE Alu 1 301 -11 1934 155 0 10 chr2 178423711 178424014 -74832569 + AluJb SINE Alu 1 300 -12 23 33 0 0 chr2 178424522 178424552 -74832031 + AT_rich Low_complexity Low_complexity 1 30 0 28 48 0 0 chr2 178425868 178425910 -74830673 + AT_rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr2 178426028 178426052 -74830531 + AT_rich Low_complexity Low_complexity 1 24 0 2073 154 0 7 chr2 178426572 178426877 -74829706 + AluJb SINE Alu 1 303 -9 227 215 65 43 chr2 178427057 178427150 -74829433 - MER5A DNA MER1_type -81 108 14 * 234 222 74 37 chr2 178427070 178427151 -74829432 + MER5B DNA MER1_type 95 178 0 1345 210 49 3 chr2 178428562 178428848 -74827735 - AluJo SINE Alu -13 299 1 1681 172 0 0 chr2 178428946 178429213 -74827370 + AluJb SINE Alu 1 267 -45 270 0 0 0 chr2 178429228 178429258 -74827325 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 250 345 34 0 chr2 178429501 178429620 -74826963 - LTR67 LTR ERVL 0 557 435 541 253 165 8 chr2 178430098 178430347 -74826236 - L2 LINE L2 -2 3311 3024 345 91 0 0 chr2 178430399 178430443 -74826140 + LTR56 LTR ERV1 349 392 -53 438 285 89 0 chr2 178430751 178430909 -74825674 - L2 LINE L2 -943 2371 2200 52 26 0 13 chr2 178432488 178432501 -74824082 + AT_rich Low_complexity Low_complexity 1 13 -63 1678 145 22 33 chr2 178432501 178432777 -74823806 + AluJb SINE Alu 1 273 -39 52 26 0 13 chr2 178432777 178432840 -74823743 + AT_rich Low_complexity Low_complexity 13 76 0 2153 121 7 3 chr2 178433150 178433448 -74823135 - AluSq SINE Alu -14 299 1 709 169 18 24 chr2 178433519 178433685 -74822898 - L1MB8 LINE L1 -2 6176 6012 635 197 23 0 chr2 178433698 178433830 -74822753 - AluJo SINE Alu -176 136 2 318 110 137 27 chr2 178434028 178434101 -74822482 - L1MC5 LINE L1 -50 7911 7831 471 208 8 16 chr2 178434141 178434266 -74822317 - L1MB8 LINE L1 0 6178 6055 194 286 54 95 chr2 178434307 178434475 -74822108 - L3 LINE CR1 -13 1564 1404 1932 108 19 60 chr2 178434526 178434842 -74821741 - AluSx SINE Alu -9 303 1 2453 65 0 3 chr2 178434843 178435134 -74821449 - AluSq SINE Alu -23 290 1 360 222 94 89 chr2 178435659 178435688 -74820895 + L2 LINE L2 3108 3135 -178 2309 115 3 0 chr2 178435688 178435993 -74820590 - AluSx SINE Alu -6 306 1 360 222 94 89 chr2 178435993 178436166 -74820417 + L2 LINE L2 3135 3311 -2 506 189 139 21 chr2 178438198 178438333 -74818250 + L1MC4 LINE L1 7898 8042 0 2153 115 0 7 chr2 178438976 178439264 -74817319 + AluSx SINE Alu 14 299 -13 204 40 0 0 chr2 178439298 178439323 -74817260 + (CTG)n Simple_repeat Simple_repeat 1 25 0 312 27 0 0 chr2 178439323 178439360 -74817223 + (TCC)n Simple_repeat Simple_repeat 1 37 0 2004 149 0 10 chr2 178439508 178439817 -74816766 - AluJb SINE Alu -6 306 1 2316 109 0 0 chr2 178440243 178440546 -74816037 + AluSx SINE Alu 1 303 -9 2076 121 0 40 chr2 178440765 178441087 -74815496 - AluJo SINE Alu -3 309 1 1057 153 0 0 chr2 178443693 178443856 -74812727 - AluJb SINE Alu -7 305 143 1312 123 21 0 chr2 178444098 178444285 -74812298 + AluJo SINE Alu 45 235 -77 1706 114 167 9 chr2 178444484 178444808 -74811775 - THE1C LTR MaLR 0 375 1 369 0 0 0 chr2 178445711 178445752 -74810831 + (TA)n Simple_repeat Simple_repeat 2 42 0 600 207 183 58 chr2 178446295 178446590 -74809993 + Charlie8 DNA MER1_type 2 333 -2084 2313 93 20 0 chr2 178447219 178447520 -74809063 - AluSx SINE Alu -5 307 1 2376 83 0 3 chr2 178447530 178447842 -74808741 - AluY SINE Alu 0 311 1 2349 68 20 0 chr2 178447939 178448233 -74808350 + AluSc SINE Alu 1 300 -9 27 87 0 0 chr2 178449495 178449564 -74807019 + GC_rich Low_complexity Low_complexity 1 69 0 285 288 79 53 chr2 178450084 178450411 -74806172 - L2 LINE L2 -166 3106 2774 389 250 16 62 chr2 178450989 178451117 -74805466 - MIR3 SINE MIR -40 168 47 1701 152 71 7 chr2 178452128 178452411 -74804172 + AluJb SINE Alu 1 301 -11 195 129 0 0 chr2 178452412 178452443 -74804140 + (CATA)n Simple_repeat Simple_repeat 2 32 0 2539 72 0 0 chr2 178452472 178452778 -74803805 + AluSq SINE Alu 1 306 -7 1459 112 0 19 chr2 178453052 178453258 -74803325 + AluSg/x SINE Alu 94 295 -17 2714 77 120 2 chr2 178453330 178453731 -74802852 - LTR7 LTR ERV1 -2 448 1 2481 95 45 13 chr2 178453731 178454109 -74802474 - HERVH LTR ERV1 0 7713 7324 1435 128 18 0 chr2 178454109 178454327 -74802256 - HERVH LTR ERV1 -1894 5819 5598 * 4339 147 0 6 chr2 178454326 178454992 -74801591 - HERVH LTR ERV1 -2564 5149 4488 26667 86 48 14 chr2 178454994 178458856 -74797727 - HERVH LTR ERV1 -3720 3993 1 2714 70 122 5 chr2 178458858 178459259 -74797324 - LTR7 LTR ERV1 -2 448 1 282 269 194 45 chr2 178459416 178459617 -74796966 + MIR SINE MIR 32 262 0 234 231 0 0 chr2 178460292 178460344 -74796239 + MLT1J2 LTR MaLR 273 324 -126 828 113 16 16 chr2 178460712 178460836 -74795747 - FLAM_C SINE Alu -17 126 3 1862 148 8 48 chr2 178461225 178461576 -74795007 - MER1B DNA MER1_type 0 337 1 2115 102 49 3 chr2 178462102 178462386 -74794197 + AluSg SINE Alu 1 297 -13 180 0 0 0 chr2 178462386 178462406 -74794177 + (TA)n Simple_repeat Simple_repeat 2 21 0 476 291 53 7 chr2 178462974 178463125 -74793458 - MIR SINE MIR -92 170 13 2136 107 4 0 chr2 178463729 178464010 -74792573 - AluSp SINE Alu -30 283 2 1568 120 30 123 chr2 178464335 178464668 -74791915 + AluJb SINE Alu 1 302 -10 210 301 39 29 chr2 178464827 178464930 -74791653 + MIR SINE MIR 73 176 -86 280 277 40 40 chr2 178465281 178465382 -74791201 - MIR SINE MIR -49 213 113 1676 124 113 0 chr2 178465478 178465744 -74790839 + AluJb SINE Alu 1 296 -16 1964 143 0 17 chr2 178466147 178466447 -74790136 - AluSx SINE Alu -17 295 1 258 81 0 0 chr2 178469541 178469578 -74787005 + (A)n Simple_repeat Simple_repeat 1 37 0 915 205 113 48 chr2 178470427 178470720 -74785863 - L1ME3A LINE L1 -10 6160 5849 37 62 0 0 chr2 178471195 178471260 -74785323 + AT_rich Low_complexity Low_complexity 1 65 0 1830 150 3 0 chr2 178471581 178471874 -74784709 - AluJb SINE Alu -18 294 1 1876 155 0 3 chr2 178471881 178472171 -74784412 - AluJb SINE Alu -23 289 1 520 90 11 22 chr2 178473907 178473996 -74782587 + (TCTA)n Simple_repeat Simple_repeat 1 88 0 182 276 69 17 chr2 178474548 178474606 -74781977 + L2 LINE L2 3229 3289 -24 1618 181 11 0 chr2 178474651 178474932 -74781651 - AluJo SINE Alu -22 290 7 14181 124 84 40 chr2 178475563 178475629 -74780954 - Tigger2 DNA MER2_type 0 2718 2656 1503 152 79 35 chr2 178475629 178475919 -74780664 - AluJb SINE Alu -9 303 1 14181 124 84 40 chr2 178475919 178475968 -74780615 - Tigger2 DNA MER2_type -62 2656 2611 2200 102 7 10 chr2 178475968 178476272 -74780311 + AluSg SINE Alu 1 303 -7 14181 124 84 40 chr2 178476272 178477645 -74778938 - Tigger2 DNA MER2_type -107 2611 1300 189 0 0 0 chr2 178477645 178477666 -74778917 + (TTCA)n Simple_repeat Simple_repeat 4 24 0 2009 98 18 4 chr2 178477673 178477949 -74778634 - AluSc SINE Alu -29 280 1 14181 124 84 40 chr2 178477949 178478128 -74778455 - Tigger2 DNA MER2_type -1423 1295 1125 2387 63 0 50 chr2 178478128 178478446 -74778137 - AluY SINE Alu -9 302 1 14181 124 84 40 chr2 178478446 178478502 -74778081 - Tigger2 DNA MER2_type -1593 1125 1073 1711 163 0 32 chr2 178478502 178478815 -74777768 - AluJb SINE Alu -9 303 1 14181 124 84 40 chr2 178478815 178478866 -74777717 - Tigger2 DNA MER2_type -1645 1073 1026 2570 68 0 0 chr2 178478866 178479176 -74777407 + AluY SINE Alu 2 311 0 14181 124 84 40 chr2 178479176 178479834 -74776749 - Tigger2 DNA MER2_type -1692 1026 149 2117 106 3 30 chr2 178479834 178480135 -74776448 - AluSx SINE Alu -19 293 1 14181 124 84 40 chr2 178480135 178480291 -74776292 - Tigger2 DNA MER2_type -2569 149 1 1377 182 104 0 chr2 178481336 178481605 -74774978 + AluJo SINE Alu 1 297 -15 22 56 0 0 chr2 178481667 178481703 -74774880 + AT_rich Low_complexity Low_complexity 1 36 0 402 200 134 69 chr2 178483417 178483707 -74772876 - L1MC5 LINE L1 -44 7917 7609 250 234 0 16 chr2 178484132 178484196 -74772387 + MIR SINE MIR 167 229 -33 293 337 114 12 chr2 178484932 178485098 -74771485 - MIR3 SINE MIR -6 202 20 1816 143 10 26 chr2 178485164 178485471 -74771112 - AluSx SINE Alu -2 310 9 724 270 49 10 chr2 178485518 178485722 -74770861 - MIR SINE MIR -44 218 7 331 320 128 65 chr2 178485857 178486475 -74770108 - L2 LINE L2 -554 2760 2104 1628 175 39 0 chr2 178486878 178487164 -74769419 - AluJo SINE Alu -13 299 3 29 28 0 0 chr2 178487793 178487829 -74768754 + AT_rich Low_complexity Low_complexity 1 36 0 1078 136 72 76 chr2 178487887 178488123 -74768460 - MER46A DNA MER2_type -1 235 1 652 221 62 0 chr2 178488126 178488271 -74768312 - MIR SINE MIR -45 217 64 1944 130 29 0 chr2 178488346 178488649 -74767934 - AluSg SINE Alu 0 311 1 2005 92 66 0 chr2 178488913 178489185 -74767398 - AluSx SINE Alu -22 290 1 1411 199 77 0 chr2 178489191 178489478 -74767105 - AluJb SINE Alu -3 309 1 1268 237 110 55 chr2 178490021 178490240 -74766343 - L2 LINE L2 -14 3299 3094 720 176 8 23 chr2 178490240 178490371 -74766212 - FLAM_A SINE Alu -4 129 1 1268 237 110 55 chr2 178490371 178490645 -74765938 - L2 LINE L2 -219 3094 2740 426 20 0 0 chr2 178491284 178491335 -74765248 + (CA)n Simple_repeat Simple_repeat 2 52 0 23 78 0 0 chr2 178491424 178491475 -74765108 + AT_rich Low_complexity Low_complexity 1 51 0 363 78 0 0 chr2 178491558 178491609 -74764974 + (CA)n Simple_repeat Simple_repeat 1 51 0 2146 90 3 24 chr2 178491662 178491951 -74764632 + AluSp SINE Alu 1 283 -30 1715 162 30 0 chr2 178492041 178492306 -74764277 - AluJb SINE Alu -39 273 1 27 0 0 0 chr2 178492892 178492919 -74763664 + AT_rich Low_complexity Low_complexity 1 27 0 1191 178 109 74 chr2 178493890 178494228 -74762355 + MLT1A2 LTR MaLR 5 354 -20 21 0 0 0 chr2 178494982 178495003 -74761580 + AT_rich Low_complexity Low_complexity 1 21 0 2070 132 0 13 chr2 178495648 178495952 -74760631 + AluSx SINE Alu 1 300 -12 22 0 0 0 chr2 178496020 178496042 -74760541 + AT_rich Low_complexity Low_complexity 1 22 0 2207 114 7 0 chr2 178496132 178496438 -74760145 + AluSg SINE Alu 1 308 -2 267 31 0 0 chr2 178496586 178496618 -74759965 + (CCAA)n Simple_repeat Simple_repeat 4 35 0 645 123 189 16 chr2 178497318 178497440 -74759143 - FLAM_C SINE Alu 0 143 1 1997 95 0 19 chr2 178497693 178497956 -74758627 + AluSg SINE Alu 4 261 -49 360 0 0 0 chr2 178497959 178497999 -74758584 + (CA)n Simple_repeat Simple_repeat 2 41 0 181 227 45 76 chr2 178498502 178498568 -74758015 - L3 LINE CR1 -909 668 605 279 104 0 0 chr2 178499276 178499324 -74757259 + (CA)n Simple_repeat Simple_repeat 1 48 0 23 54 0 0 chr2 178500106 178500143 -74756440 + AT_rich Low_complexity Low_complexity 1 37 0 1867 150 24 0 chr2 178503753 178504040 -74752543 + AluSx SINE Alu 1 294 -18 301 378 76 27 chr2 178504862 178505087 -74751496 - L2 LINE L2 -339 2975 2740 782 129 0 0 chr2 178505220 178505336 -74751247 + FLAM_C SINE Alu 1 116 -17 591 256 0 0 chr2 178505383 178505500 -74751083 - FLAM_A SINE Alu -16 117 1 1890 138 4 4 chr2 178505642 178505918 -74750665 - AluSx SINE Alu -36 276 1 26 64 0 0 chr2 178507426 178507473 -74749110 + AT_rich Low_complexity Low_complexity 1 47 0 1018 131 14 0 chr2 178507804 178507949 -74748634 + AluSg/x SINE Alu 127 273 -39 203 59 0 29 chr2 178507958 178507992 -74748591 + (CAA)n Simple_repeat Simple_repeat 2 34 0 2165 211 16 10 chr2 178507999 178508512 -74748071 + L1MB5 LINE L1 4023 4538 -1608 3547 212 40 20 chr2 178508513 178508798 -74747785 + L1MB5 LINE L1 4760 5038 -1136 1960 140 7 0 chr2 178508798 178509101 -74747482 + AluSx SINE Alu 1 305 0 3547 212 40 20 chr2 178509101 178509231 -74747352 + L1MB5 LINE L1 5038 5164 -1010 2155 90 59 11 chr2 178509231 178509558 -74747025 + L1MA3 LINE L1 5935 6282 -23 586 40 27 0 chr2 178509558 178509633 -74746950 - MADE1 DNA Mariner -3 77 1 2155 90 59 11 chr2 178509633 178509659 -74746924 + L1MA3 LINE L1 6282 6305 0 3547 212 40 20 chr2 178509659 178510632 -74745951 + L1MB5 LINE L1 5164 6173 -1 2176 93 68 71 chr2 178510762 178510931 -74745652 + THE1B LTR MaLR 1 169 -195 2283 85 3 3 chr2 178510931 178511226 -74745357 + AluSq SINE Alu 1 295 -18 2176 93 68 71 chr2 178511226 178511421 -74745162 + THE1B LTR MaLR 169 364 0 1484 224 94 36 chr2 178511444 178511921 -74744662 + MLT1D LTR MaLR 1 505 0 488 234 28 0 chr2 178511921 178512028 -74744555 + MLT1D-int LTR MaLR 1 110 -1261 1538 124 0 5 chr2 178512035 178512245 -74744338 + AluSq SINE Alu 1 209 -104 1028 266 57 55 chr2 178512361 178512763 -74743820 + MLT1D-int LTR MaLR 955 1357 -14 2356 88 3 0 chr2 178513032 178513329 -74743254 + AluSp SINE Alu 1 298 -15 1655 254 124 76 chr2 178513401 178515017 -74741566 - L1MEc LINE L1 -2154 4061 2368 481 207 27 81 chr2 178515038 178515127 -74741456 - L1MEc LINE L1 -4914 1482 1390 1851 155 26 3 chr2 178515127 178515430 -74741153 - AluJb SINE Alu -2 310 1 481 207 27 81 chr2 178515430 178515562 -74741021 - L1MEc LINE L1 -5006 1390 1273 304 183 183 0 chr2 178515646 178515739 -74740844 + L1MEc LINE L1 1585 1694 -4702 1091 154 85 53 chr2 178516145 178516392 -74740191 + L1MC1 LINE L1 6079 6333 0 2052 137 3 19 chr2 178516434 178516749 -74739834 - AluJb SINE Alu -2 310 1 21 36 0 0 chr2 178516749 178516777 -74739806 + AT_rich Low_complexity Low_complexity 1 28 0 187 334 203 3 chr2 178517099 178517261 -74739322 - MIR SINE MIR -28 234 38 1941 135 30 30 chr2 178517291 178517625 -74738958 + MER1B DNA MER1_type 4 337 0 1685 176 20 10 chr2 178518117 178518418 -74738165 - AluJo SINE Alu -8 304 1 261 258 65 0 chr2 178518443 178518505 -74738078 - L2 LINE L2 -22 3291 3226 313 349 60 60 chr2 178519181 178519528 -74737055 - L2 LINE L2 -414 2900 2554 768 152 7 51 chr2 178519613 178519751 -74736832 - FLAM_C SINE Alu -1 132 1 784 174 0 7 chr2 178520012 178520156 -74736427 + FLAM_C SINE Alu 1 143 0 590 333 141 37 chr2 178520329 178520918 -74735665 - L2 LINE L2 -960 2354 1705 1876 131 62 3 chr2 178521094 178521385 -74735198 - AluSq SINE Alu -3 310 3 325 292 9 71 chr2 178522562 178522675 -74733908 + L2 LINE L2 3162 3267 -5 180 194 28 0 chr2 178523757 178523793 -74732790 + L2 LINE L2 3272 3308 -5 2205 106 0 13 chr2 178523815 178524118 -74732465 - AluSx SINE Alu -10 302 4 1627 130 18 11 chr2 178524895 178525171 -74731412 + L1PA16 LINE L1 5888 6165 -1 391 298 57 14 chr2 178526526 178526667 -74729916 + MLT1L LTR MaLR 3 149 -466 804 221 32 0 chr2 178526673 178526831 -74729752 - MER5A DNA MER1_type -23 166 4 349 292 49 0 chr2 178526841 178526964 -74729619 + L1ME3A LINE L1 1525 1901 -4315 513 301 133 41 chr2 178527159 178527574 -74729009 + MLT1J LTR MaLR 40 492 -19 402 275 66 14 chr2 178527611 178527822 -74728761 + L1ME3A LINE L1 4831 5052 -1163 1542 171 45 4 chr2 178527860 178528129 -74728454 + AluJo SINE Alu 1 280 -32 768 281 80 11 chr2 178528163 178528540 -74728043 + L1ME3A LINE L1 5634 6036 -203 553 287 17 33 chr2 178528736 178528917 -74727666 + MER5B DNA MER1_type 1 178 0 2280 102 0 0 chr2 178529240 178529533 -74727050 - AluSc SINE Alu -16 293 1 1242 137 114 8 chr2 178530029 178530284 -74726299 - L1MA8 LINE L1 -3 6288 6007 29 47 0 0 chr2 178531051 178531094 -74725489 + AT_rich Low_complexity Low_complexity 1 43 0 336 235 245 0 chr2 178531207 178531305 -74725278 - L2 LINE L2 -3 3310 3189 316 281 85 0 chr2 178533218 178533300 -74723283 + L2 LINE L2 3215 3303 -10 245 111 185 56 chr2 178533663 178533717 -74722866 - MER85 DNA T2_type -59 80 20 272 250 112 60 chr2 178533720 178533836 -74722747 + MIR SINE MIR 95 216 -46 273 173 0 19 chr2 178534832 178534884 -74721699 - L2 LINE L2 0 3313 3263 2178 117 27 18 chr2 178535528 178535862 -74720721 - MER1B DNA MER1_type 0 337 1 1379 219 56 12 chr2 178537572 178537896 -74718687 + MER58B DNA MER1_type 4 341 0 193 300 29 14 chr2 178538082 178538152 -74718431 + L2 LINE L2 3243 3313 0 301 204 31 43 chr2 178538503 178538598 -74717985 - MIR SINE MIR -102 106 21 2091 132 0 0 chr2 178538936 178539231 -74717352 + AluSx SINE Alu 1 295 -17 430 205 39 63 chr2 178539631 178539758 -74716825 + MER103 DNA DNA 33 156 -10 2450 63 3 3 chr2 178541407 178541709 -74714874 - AluY SINE Alu -9 302 1 21 36 0 0 chr2 178542080 178542108 -74714475 + AT_rich Low_complexity Low_complexity 1 28 0 329 316 34 78 chr2 178542919 178543033 -74713550 - L1ME LINE L1 -408 5713 5610 2318 90 0 7 chr2 178543033 178543333 -74713250 - AluY SINE Alu -13 298 1 329 316 34 78 chr2 178543333 178543424 -74713159 - L1ME LINE L1 -511 5610 5517 2621 86 3 27 chr2 178543486 178543859 -74712724 - L1PA7 LINE L1 -1 6153 5790 2262 115 0 6 chr2 178543917 178544230 -74712353 + AluSq SINE Alu 1 311 -2 591 209 18 0 chr2 178544230 178544340 -74712243 - FLAM_A SINE Alu -29 113 2 304 337 72 30 chr2 178544384 178544550 -74712033 + MER5B DNA MER1_type 1 173 -5 371 275 50 33 chr2 178545091 178545211 -74711372 + MIR SINE MIR 6 127 -135 765 208 82 39 chr2 178545302 178545509 -74711074 + MER20 DNA MER1_type 4 219 0 466 209 64 0 chr2 178545569 178545679 -74710904 + Charlie1 DNA MER1_type 109 225 -2536 519 139 41 33 chr2 178545689 178545811 -74710772 + Charlie1 DNA MER1_type 2638 2760 -1 209 277 21 0 chr2 178545910 178545957 -74710626 - L2 LINE L2 -11 3261 3214 6996 136 39 19 chr2 178546063 178547167 -74709416 - L1MA3 LINE L1 0 6305 5225 2339 82 0 0 chr2 178547167 178547459 -74709124 - AluY SINE Alu -19 292 1 6996 136 39 19 chr2 178547459 178548204 -74708379 - L1MA3 LINE L1 -1080 5225 4406 2105 100 7 39 chr2 178548204 178548348 -74708235 + AluSx SINE Alu 1 148 -164 2061 124 0 33 chr2 178548348 178548654 -74707929 + AluSq SINE Alu 1 296 -17 2105 100 7 39 chr2 178548654 178548819 -74707764 + AluSx SINE Alu 148 300 -12 6996 136 39 19 chr2 178548819 178549168 -74707415 - L1MA3 LINE L1 -1899 4406 4065 2251 112 0 0 chr2 178549759 178550063 -74706520 - AluSx SINE Alu -8 304 1 1953 163 3 0 chr2 178550223 178550529 -74706054 + AluSx SINE Alu 6 312 0 23 33 0 0 chr2 178550926 178550956 -74705627 + AT_rich Low_complexity Low_complexity 1 30 0 1299 226 56 48 chr2 178551730 178551811 -74704772 + MSTD LTR MaLR 1 80 -316 1986 129 4 0 chr2 178551811 178552090 -74704493 + AluSq SINE Alu 4 283 -30 1299 226 56 48 chr2 178552090 178552401 -74704182 + MSTD LTR MaLR 80 396 0 2235 86 3 46 chr2 178552490 178552815 -74703768 + AluY SINE Alu 1 311 0 324 323 169 15 chr2 178553298 178553493 -74703090 + L2 LINE L2 1733 1957 -1357 541 170 9 18 chr2 178553520 178553632 -74702951 - Charlie1 DNA MER1_type -13 2748 2638 758 272 33 5 chr2 178553684 178553868 -74702715 - Charlie1 DNA MER1_type -2571 190 2 233 263 120 69 chr2 178553944 178554119 -74702464 + L2 LINE L2 2353 2536 -778 2400 84 3 0 chr2 178554131 178554427 -74702156 + AluSg SINE Alu 2 298 -12 227 148 185 19 chr2 178554436 178554490 -74702093 + MER5A DNA MER1_type 46 108 -81 231 250 18 0 chr2 178554947 178555003 -74701580 + MER5B DNA MER1_type 122 178 0 272 378 113 7 chr2 178555256 178555407 -74701176 + L2 LINE L2 3097 3263 -9 21 0 0 0 chr2 178555822 178555843 -74700740 + AT_rich Low_complexity Low_complexity 1 21 0 1158 136 0 0 chr2 178555924 178556086 -74700497 + AluSg/x SINE Alu 138 299 -13 315 71 0 0 chr2 178556417 178556459 -74700124 + (TAA)n Simple_repeat Simple_repeat 2 43 0 1887 159 10 3 chr2 178556576 178556878 -74699705 - AluJb SINE Alu -8 304 1 243 0 0 0 chr2 178557903 178557930 -74698653 + (CA)n Simple_repeat Simple_repeat 2 28 0 2321 95 3 3 chr2 178560980 178561284 -74695299 + AluSq SINE Alu 1 304 -9 288 325 42 24 chr2 178561421 178561633 -74694950 + HAL1b LINE L1 432 647 -701 245 218 146 64 chr2 178562102 178562212 -74694371 + L1ME LINE L1 51 169 -5901 2048 147 0 0 chr2 178562216 178562523 -74694060 + AluSx SINE Alu 1 307 -5 1663 251 132 25 chr2 178562543 178563665 -74692918 + L1ME LINE L1 159 1365 -4715 543 294 138 50 chr2 178563655 178563921 -74692662 + HAL1 LINE L1 442 752 -1755 * 1751 155 25 14 chr2 178563921 178564205 -74692378 + AluJb SINE Alu 1 287 -25 543 294 138 50 chr2 178564205 178564316 -74692267 + HAL1 LINE L1 752 852 -1655 * 1701 213 58 27 chr2 178564311 178564794 -74691789 + HAL1 LINE L1 1289 1786 -721 1367 129 119 0 chr2 178564820 178565030 -74691553 - AluSg SINE Alu -75 235 1 1581 264 37 75 chr2 178565143 178565542 -74691041 - L1M4 LINE L1 -990 5156 4743 926 150 6 42 chr2 178565542 178565709 -74690874 - FRAM SINE Alu -4 162 2 1581 264 37 75 chr2 178565709 178566289 -74690294 - L1M4 LINE L1 -1403 4743 4214 455 178 40 0 chr2 178566292 178566393 -74690190 + L1ME3A LINE L1 6039 6143 -27 753 178 48 0 chr2 178566749 178566895 -74689688 - MER3 DNA MER1_type -56 153 1 901 194 50 6 chr2 178566922 178567102 -74689481 + MER58A DNA MER1_type 37 224 0 2114 71 45 0 chr2 178567588 178567904 -74688679 - AluY SINE Alu 0 328 1 227 309 0 24 chr2 178568001 178568085 -74688498 + LTR67 LTR ERVL 435 516 -41 204 357 49 63 chr2 178569191 178569477 -74687106 - L2 LINE L2 -174 3098 2817 23 78 0 0 chr2 178569993 178570044 -74686539 + AT_rich Low_complexity Low_complexity 1 51 0 301 300 106 70 chr2 178570096 178570323 -74686260 + HAL1b LINE L1 14 248 -1100 2387 81 3 0 chr2 178570484 178570780 -74685803 - AluSq SINE Alu -16 297 1 1715 237 39 8 chr2 178570863 178571457 -74685126 + L1MB7 LINE L1 2849 3460 -2686 * 4714 182 34 66 chr2 178571437 178572094 -74684489 + L1 LINE L1 3723 4400 -1746 884 138 0 0 chr2 178572094 178572217 -74684366 + FLAM_C SINE Alu 5 127 -16 4714 182 34 66 chr2 178572217 178572349 -74684234 + L1 LINE L1 4400 4535 -1611 2081 131 0 3 chr2 178572349 178572646 -74683937 + AluSx SINE Alu 3 298 -14 4714 182 34 66 chr2 178572646 178573515 -74683068 + L1 LINE L1 4535 5327 -819 1889 137 4 4 chr2 178573515 178573792 -74682791 + AluSx SINE Alu 1 277 -35 186 43 0 0 chr2 178573795 178573818 -74682765 + (GGAAA)n Simple_repeat Simple_repeat 5 27 0 273 119 0 0 chr2 178573836 178573878 -74682705 + (GA)n Simple_repeat Simple_repeat 1 42 0 2174 131 66 0 chr2 178573897 178574278 -74682305 + L1MA9 LINE L1 5902 6307 -5 973 196 90 27 chr2 178574289 178576101 -74680482 + L1MB7 LINE L1 3441 5467 -699 1962 182 93 8 chr2 178576101 178576521 -74680062 + MSTB2 LTR MaLR 1 365 0 2858 190 38 34 chr2 178576521 178576938 -74679645 + L1MB7 LINE L1 5466 5889 -295 2351 90 7 0 chr2 178576938 178577238 -74679345 + AluSq SINE Alu 1 302 -11 2858 190 38 34 chr2 178577238 178577535 -74679048 + L1MB7 LINE L1 5889 6183 -1 722 244 92 30 chr2 178578636 178578931 -74677652 - L2 LINE L2 0 3313 3001 210 361 0 21 chr2 178579045 178579142 -74677441 - L2 LINE L2 -515 2799 2705 1364 136 139 27 chr2 178579156 178579414 -74677169 - AluSg1 SINE Alu -22 287 1 4092 143 59 133 chr2 178579709 178579879 -74676704 + L1MA5 LINE L1 4210 4391 -1755 2155 91 45 3 chr2 178579879 178580165 -74676418 + AluSx SINE Alu 1 298 -14 4092 143 59 133 chr2 178580165 178580537 -74676046 + L1MA5 LINE L1 4391 4789 -1357 608 97 140 0 chr2 178580537 178580630 -74675953 - AluSq/x SINE Alu -207 106 1 4092 143 59 133 chr2 178580630 178581275 -74675308 + L1MA5 LINE L1 4789 5395 -751 2322 87 3 7 chr2 178581276 178581586 -74674997 + AluSx SINE Alu 1 309 -3 4471 146 42 3 chr2 178581586 178582358 -74674225 + L1MA5 LINE L1 5497 6298 -2 830 276 100 56 chr2 178582738 178583366 -74673217 - L1MC4 LINE L1 -270 7772 7117 753 236 151 8 chr2 178583385 178583644 -74672939 + L1MC4 LINE L1 6751 7046 -996 1693 159 14 10 chr2 178583649 178583966 -74672617 + AluJb SINE Alu 1 312 0 291 259 9 18 chr2 178584023 178584135 -74672448 + L1MC4 LINE L1 7932 8042 0 440 268 84 38 chr2 178584309 178584477 -74672106 + L1ME LINE L1 2468 2627 -3913 1976 124 28 10 chr2 178584477 178584768 -74671815 - AluJb SINE Alu -16 296 1 440 268 84 38 chr2 178584768 178585092 -74671491 + L1ME LINE L1 2627 3052 -3488 339 277 168 0 chr2 178585118 178585320 -74671263 + L1ME LINE L1 3160 3395 -3145 * 2027 199 125 37 chr2 178585319 178585942 -74670641 + L1ME2 LINE L1 5398 6075 -89 1486 208 41 56 chr2 178585972 178586060 -74670523 + L1ME1 LINE L1 5685 5773 -393 2125 117 13 0 chr2 178586060 178586360 -74670223 + AluSx SINE Alu 1 304 -8 1486 208 41 56 chr2 178586360 178586757 -74669826 + L1ME1 LINE L1 5773 6163 -3 436 251 103 36 chr2 178586830 178587053 -74669530 + L1ME LINE L1 3441 3678 -2862 1684 158 6 48 chr2 178587163 178587474 -74669109 + AluJb SINE Alu 1 298 -14 410 225 0 22 chr2 178587645 178587734 -74668849 + L1ME2 LINE L1 6029 6115 -49 2170 116 7 0 chr2 178587819 178588122 -74668461 - AluSg SINE Alu -5 305 1 350 278 156 47 chr2 178588144 178588676 -74667907 + L1ME LINE L1 4180 4769 -1771 261 322 43 0 chr2 178588732 178588847 -74667736 + L1ME LINE L1 4883 5002 -1538 2247 107 0 7 chr2 178589145 178589445 -74667138 - AluSq SINE Alu -15 298 1 256 282 29 10 chr2 178589544 178589647 -74666936 + L1P LINE L1 4902 5006 -1140 1591 133 58 50 chr2 178589736 178590098 -74666485 + Looper DNA T2_type 9 373 -1185 1896 202 41 53 chr2 178590100 178590426 -74666157 + MLT1D LTR MaLR 1 320 -185 1848 171 3 0 chr2 178590426 178590736 -74665847 + AluSx SINE Alu 1 311 -1 1896 202 41 53 chr2 178590736 178590920 -74665663 + MLT1D LTR MaLR 320 505 0 * 1994 194 82 46 chr2 178590920 178591039 -74665544 + Looper DNA T2_type 372 485 -1073 2409 69 10 13 chr2 178591039 178591345 -74665238 - AluSp SINE Alu -8 305 1 1994 194 82 46 chr2 178591345 178591793 -74664790 + Looper DNA T2_type 485 960 -598 647 196 13 6 chr2 178591809 178591967 -74664616 + Looper DNA T2_type 1400 1558 0 439 344 55 9 chr2 178592072 178592290 -74664293 + L1ME LINE L1 5568 5795 -745 2440 70 10 0 chr2 178592291 178592593 -74663990 + AluSx SINE Alu 1 305 -7 432 356 36 0 chr2 178592657 178592876 -74663707 + L1ME LINE L1 5876 6102 -413 1808 132 47 59 chr2 178592917 178593258 -74663325 - MER1B DNA MER1_type 0 337 1 256 238 0 16 chr2 178593746 178593809 -74662774 + (TA)n Simple_repeat Simple_repeat 2 63 0 344 243 70 121 chr2 178593910 178594182 -74662401 + MER112 DNA MER1_type 1 258 -2 3775 164 27 19 chr2 178595472 178595837 -74660746 + L1MB3 LINE L1 5161 5522 -1055 2096 114 13 19 chr2 178595837 178596145 -74660438 + AluSx SINE Alu 1 306 -6 3775 164 27 19 chr2 178596145 178597117 -74659466 + L1MB3 LINE L1 5522 6577 0 1742 153 14 4 chr2 178597131 178597406 -74659177 + AluJb SINE Alu 8 285 -27 383 179 27 36 chr2 178597430 178597542 -74659041 + L1M4 LINE L1 5135 5245 -901 2171 91 0 60 chr2 178597818 178598136 -74658447 - AluSc SINE Alu -10 299 1 253 255 0 0 chr2 178598171 178598218 -74658365 + L2 LINE L2 3210 3256 -16 320 331 153 6 chr2 178598243 178598400 -74658183 + MER5A DNA MER1_type 9 188 -1 9425 175 70 58 chr2 178598420 178598629 -74657954 - Cheshire DNA MER1_type -12 2408 2203 2056 140 3 0 chr2 178598629 178598929 -74657654 + AluSq SINE Alu 1 301 -12 270 0 0 0 chr2 178598930 178598960 -74657623 + (CA)n Simple_repeat Simple_repeat 2 31 0 9425 175 70 58 chr2 178598960 178599078 -74657505 - Cheshire DNA MER1_type -217 2203 2088 2058 128 0 20 chr2 178599078 178599375 -74657208 - AluSx SINE Alu -21 291 1 9425 175 70 58 chr2 178599375 178599405 -74657178 - Cheshire DNA MER1_type -332 2088 2060 1626 162 3 23 chr2 178599405 178599707 -74656876 + AluJo SINE Alu 8 303 -9 9425 175 70 58 chr2 178599707 178601598 -74654985 - Cheshire DNA MER1_type -360 2060 124 773 60 0 0 chr2 178601598 178601698 -74654885 - L1PB1 LINE L1 -1 6150 6051 9425 175 70 58 chr2 178601698 178601738 -74654845 - Cheshire DNA MER1_type -2296 124 86 2299 100 0 6 chr2 178602866 178603177 -74653406 + AluSx SINE Alu 1 309 -3 220 226 0 19 chr2 178603741 178603794 -74652789 + (CATA)n Simple_repeat Simple_repeat 3 54 0 25 75 0 0 chr2 178604102 178604155 -74652428 + AT_rich Low_complexity Low_complexity 1 53 0 582 264 42 6 chr2 178604200 178604367 -74652216 + MIR SINE MIR 79 251 -11 243 247 0 0 chr2 178604609 178604682 -74651901 + (TA)n Simple_repeat Simple_repeat 1 73 0 228 240 0 0 chr2 178604712 178604762 -74651821 - MIR SINE MIR -111 151 102 237 65 0 0 chr2 178604836 178604867 -74651716 + (TG)n Simple_repeat Simple_repeat 1 31 0 1275 165 51 31 chr2 178605430 178605685 -74650898 + AluJb SINE Alu 1 260 -52 513 0 0 0 chr2 178605703 178605760 -74650823 + (CATAA)n Simple_repeat Simple_repeat 2 58 0 408 263 116 65 chr2 178605900 178605994 -74650589 + MIR SINE MIR 16 104 -158 2105 130 7 0 chr2 178605994 178606286 -74650297 + AluSg SINE Alu 1 294 -16 408 263 116 65 chr2 178606286 178606423 -74650160 + MIR SINE MIR 104 259 -3 183 240 0 0 chr2 178606930 178607034 -74649549 + (TA)n Simple_repeat Simple_repeat 1 104 0 316 216 54 0 chr2 178607089 178607163 -74649420 + MER116 DNA Mariner 3 80 0 420 165 101 18 chr2 178607588 178607697 -74648886 - L1ME4a LINE L1 -38 6083 5966 1973 123 67 22 chr2 178607922 178608281 -74648302 - THE1C LTR MaLR 0 375 1 1057 185 70 0 chr2 178608543 178608743 -74647840 + AluJo SINE Alu 75 288 -24 21 0 0 0 chr2 178608944 178608965 -74647618 + AT_rich Low_complexity Low_complexity 1 21 0 1827 145 7 7 chr2 178609192 178609474 -74647109 + AluSx SINE Alu 4 285 -27 860 152 13 0 chr2 178609575 178609726 -74646857 - Tigger4(Zombi) DNA MER2_type 0 2731 2579 721 184 37 7 chr2 178609743 178609879 -74646704 - AluJb SINE Alu -47 265 126 493 151 54 0 chr2 178610319 178610412 -74646171 + L1MB2 LINE L1 5305 5402 -744 3535 118 65 31 chr2 178610412 178610601 -74645982 + L1MA7 LINE L1 5621 5802 -489 784 181 23 53 chr2 178610601 178610772 -74645811 - FRAM SINE Alu 0 166 1 3535 118 65 31 chr2 178610772 178611166 -74645417 + L1MA7 LINE L1 5802 6181 -110 210 37 0 0 chr2 178611166 178611193 -74645390 + (TG)n Simple_repeat Simple_repeat 2 28 0 * 225 0 0 0 chr2 178611192 178611217 -74645366 + (TA)n Simple_repeat Simple_repeat 2 26 0 3535 118 65 31 chr2 178611193 178611275 -74645308 + L1MA7 LINE L1 6181 6288 -3 586 178 0 19 chr2 178611296 178611391 -74645192 + FLAM_A SINE Alu 38 132 -179 2024 100 0 4 chr2 178611391 178611660 -74644923 + AluSq SINE Alu 1 268 -45 586 178 0 19 chr2 178611660 178611671 -74644912 + FLAM_A SINE Alu 132 142 -169 2590 181 64 4 chr2 178611673 178612320 -74644263 + L1MB2 LINE L1 5391 6133 -38 511 87 262 10 chr2 178612333 178612427 -74644156 + AluSg/x SINE Alu 165 288 -22 207 69 0 0 chr2 178612427 178612456 -74644127 + (CAGGA)n Simple_repeat Simple_repeat 2 30 0 277 123 0 20 chr2 178612460 178612513 -74644070 + L1MB2 LINE L1 6117 6168 -3 * 457 202 92 0 chr2 178612734 178612853 -74643730 + MER58 DNA MER1_type 103 232 -109 1413 166 162 0 chr2 178612913 178613166 -74643417 + AluJb SINE Alu 1 294 -8 2237 110 3 3 chr2 178613439 178613747 -74642836 + AluSx SINE Alu 1 308 -4 2010 117 17 3 chr2 178615188 178615505 -74641078 + AluSx SINE Alu 1 321 0 1961 140 27 12 chr2 178615617 178615682 -74640901 - MER1B DNA MER1_type -2373 337 274 267 31 0 0 chr2 178615682 178615714 -74640869 + (GGGTG)n Simple_repeat Simple_repeat 5 36 0 1961 140 27 12 chr2 178615714 178615977 -74640606 - MER1B DNA MER1_type -2436 274 4 587 290 96 44 chr2 178616691 178617111 -74639472 + L1MEd LINE L1 776 1173 -4956 524 203 146 57 chr2 178617111 178617303 -74639280 + MER3 DNA MER1_type 1 209 0 587 290 96 44 chr2 178617303 178618757 -74637826 + L1MEd LINE L1 1173 2761 -3368 747 159 37 55 chr2 178618785 178618948 -74637635 + AluSg/x SINE Alu 121 280 -30 291 104 0 0 chr2 178618950 178618998 -74637585 + (TGAA)n Simple_repeat Simple_repeat 3 50 0 1896 127 4 7 chr2 178619132 178619432 -74637151 + AluSx SINE Alu 38 336 0 2672 236 58 17 chr2 178619439 178620593 -74635990 + L1ME LINE L1 2074 3279 -3103 534 219 58 24 chr2 178620635 178620899 -74635684 + L1ME LINE L1 5414 5689 -711 1781 134 53 3 chr2 178620899 178621182 -74635401 + AluSx SINE Alu 1 297 -15 2380 95 0 0 chr2 178621182 178621486 -74635097 + AluSg SINE Alu 1 304 -6 1036 225 137 29 chr2 178621497 178621941 -74634642 + L1ME3A LINE L1 5678 6169 -1 878 194 0 0 chr2 178622049 178622193 -74634390 + FRAM SINE Alu 1 143 -33 416 235 61 0 chr2 178622202 178622300 -74634283 + U13 snRNA snRNA 1 104 0 250 296 165 35 chr2 178622998 178623113 -74633470 + L2 LINE L2 3142 3271 -1 732 158 0 9 chr2 178623299 178623413 -74633170 - FAM SINE Alu -72 113 1 2170 103 0 0 chr2 178623769 178624061 -74632522 - AluY SINE Alu -18 293 2 1995 138 10 0 chr2 178624473 178624763 -74631820 + AluSx SINE Alu 1 293 -19 198 0 0 0 chr2 178624763 178624785 -74631798 + (TA)n Simple_repeat Simple_repeat 2 23 0 * 279 79 0 0 chr2 178624784 178624822 -74631761 + (TG)n Simple_repeat Simple_repeat 1 38 0 240 35 0 0 chr2 178624967 178624996 -74631587 + (T)n Simple_repeat Simple_repeat 1 29 0 286 125 2 0 chr2 178625037 178625086 -74631497 + Alu SINE Alu 249 291 -11 293 200 157 86 chr2 178625160 178625300 -74631283 - MIR SINE MIR -50 212 63 1919 160 3 6 chr2 178625496 178625808 -74630775 + AluJo SINE Alu 1 311 -1 27 29 0 0 chr2 178625837 178625871 -74630712 + AT_rich Low_complexity Low_complexity 1 34 0 271 294 24 32 chr2 178626035 178626161 -74630422 + L1ME LINE L1 5760 5884 -473 298 269 235 39 chr2 178626488 178626748 -74629835 + MLT1K LTR MaLR 274 584 -4 736 236 77 64 chr2 178626810 178626901 -74629682 + MIR SINE MIR 1 89 -173 1990 128 14 3 chr2 178626901 178627191 -74629392 - AluJb SINE Alu -19 293 1 736 236 77 64 chr2 178627191 178627332 -74629251 + MIR SINE MIR 89 236 -26 2637 40 0 3 chr2 178627343 178627647 -74628936 - AluY SINE Alu -8 303 1 240 35 0 0 chr2 178628385 178628414 -74628169 + (TTG)n Simple_repeat Simple_repeat 2 30 0 475 243 146 38 chr2 178629021 178629206 -74627377 + MIR SINE MIR 2 206 -56 249 307 123 22 chr2 178629340 178629519 -74627064 - L2 LINE L2 -3 3310 3114 26 0 0 0 chr2 178629657 178629683 -74626900 + AT_rich Low_complexity Low_complexity 1 26 0 1528 160 61 41 chr2 178629765 178630059 -74626524 - AluJo SINE Alu -12 300 1 376 212 47 12 chr2 178630187 178630272 -74626311 - MIR3 SINE MIR -3 205 118 427 259 193 0 chr2 178630302 178630437 -74626146 + MIR3 SINE MIR 33 193 -15 405 299 90 0 chr2 178630414 178630558 -74626025 - MIR3 SINE MIR -48 160 4 * 187 232 0 71 chr2 178631818 178631874 -74624709 - L3 LINE CR1 -308 1269 1218 1488 160 186 14 chr2 178631968 178632381 -74624202 + Charlie1 DNA MER1_type 2264 2747 -14 1697 136 94 0 chr2 178632713 178632978 -74623605 - AluJb SINE Alu -22 290 1 260 318 0 0 chr2 178634396 178634462 -74622121 + L2 LINE L2 3193 3258 -14 240 35 0 0 chr2 178634465 178634494 -74622089 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 229 136 37 74 chr2 178636076 178636157 -74620426 + G-rich Low_complexity Low_complexity 3 80 0 421 277 11 34 chr2 178636393 178636570 -74620013 + G-rich Low_complexity Low_complexity 4 176 0 321 308 164 34 chr2 178636573 178636834 -74619749 - L1M2 LINE L1 -5734 1115 889 282 95 0 0 chr2 178636834 178636876 -74619707 + (CGG)n Simple_repeat Simple_repeat 1 42 0 321 308 164 34 chr2 178636876 178637108 -74619475 - L1M2 LINE L1 -5960 889 558 308 308 128 23 chr2 178636962 178637134 -74619449 + L1M2 LINE L1 1222 1411 -5438 * 1599 196 44 68 chr2 178638074 178638130 -74618453 - L1ME1 LINE L1 -5 6161 6105 2276 79 0 26 chr2 178638130 178638435 -74618148 + AluSg SINE Alu 1 297 -13 1599 196 44 68 chr2 178638435 178638665 -74617918 - L1ME1 LINE L1 -61 6105 5871 2162 97 30 7 chr2 178638665 178638964 -74617619 - AluSx SINE Alu -6 306 1 1599 196 44 68 chr2 178638964 178639218 -74617365 - L1ME1 LINE L1 -295 5871 5633 254 289 26 53 chr2 178639410 178639486 -74617097 + MIR3 SINE MIR 121 194 -14 1712 159 54 4 chr2 178639617 178639894 -74616689 - AluSx SINE Alu -17 295 5 226 333 0 0 chr2 178640105 178640189 -74616394 + L1ME4a LINE L1 5754 5837 -284 596 175 0 0 chr2 178640279 178640376 -74616207 + FLAM_A SINE Alu 35 131 -11 309 241 105 15 chr2 178640376 178640509 -74616074 + L1ME4a LINE L1 5974 6118 -3 893 126 0 22 chr2 178640711 178640846 -74615737 + FLAM_C SINE Alu 1 132 -1 180 222 22 0 chr2 178641148 178641193 -74615390 + L2 LINE L2 3227 3272 0 2381 79 0 0 chr2 178641503 178641795 -74614788 + AluSg SINE Alu 1 292 -18 302 302 52 78 chr2 178641795 178641840 -74614743 + L2 LINE L2 3051 3096 -176 825 222 28 38 chr2 178641840 178642052 -74614531 - MER63A DNA MER1_type 0 210 1 302 302 52 78 chr2 178642052 178642198 -74614385 + L2 LINE L2 3096 3237 -35 367 120 40 100 chr2 178642406 178642506 -74614077 + MER53 DNA DNA 96 189 0 740 278 139 12 chr2 178642542 178642880 -74613703 + L1ME3A LINE L1 5582 5962 -208 39 0 0 0 chr2 178643818 178643857 -74612726 + AT_rich Low_complexity Low_complexity 1 39 0 28 0 0 0 chr2 178644241 178644269 -74612314 + AT_rich Low_complexity Low_complexity 1 28 0 255 98 0 0 chr2 178644365 178644406 -74612177 + Alu SINE Alu 5 45 -257 2244 97 10 0 chr2 178644675 178644965 -74611618 + AluSx SINE Alu 5 297 -15 538 234 94 65 chr2 178644972 178645343 -74611240 + L1ME4a LINE L1 5617 5998 -123 346 233 167 0 chr2 178645355 178645445 -74611138 - FLAM_A SINE Alu -27 106 2 305 248 29 9 chr2 178645447 178645552 -74611031 + L1ME4a LINE L1 5980 6086 -35 379 300 72 42 chr2 178645926 178646163 -74610420 + L1ME3A LINE L1 2110 2353 -3793 441 290 100 72 chr2 178646304 178646663 -74609920 + MLT1I LTR MaLR 41 409 0 797 259 25 19 chr2 178646777 178647093 -74609490 + L1ME3A LINE L1 4885 5202 -944 778 195 81 0 chr2 178647093 178647242 -74609341 + AluJb SINE Alu 138 298 -14 499 152 80 116 chr2 178647256 178647394 -74609189 + FLAM_A SINE Alu 1 133 -9 2718 213 111 14 chr2 178647401 178648285 -74608298 + L1ME3A LINE L1 5199 6165 -5 2781 101 62 7 chr2 178648359 178648764 -74607819 + MSTA LTR MaLR 1 427 -1 285 291 105 6 chr2 178648768 178648940 -74607643 + L1ME LINE L1 5519 5707 -414 449 167 0 0 chr2 178649222 178649294 -74607289 - AluJo/FRAM SINE Alu -31 281 210 1454 182 4 15 chr2 178649294 178649563 -74607020 - AluJo SINE Alu -46 266 1 237 299 112 97 chr2 178649566 178649978 -74606605 + L2 LINE L2 2225 2642 -672 450 324 78 0 chr2 178650450 178650592 -74605991 + L2 LINE L2 3102 3254 -18 1593 166 54 11 chr2 178650833 178651110 -74605473 + AluJo SINE Alu 1 289 -23 1691 164 51 27 chr2 178651113 178651449 -74605134 - MER2 DNA MER2_type 0 344 1 1018 269 297 8 chr2 178651511 178651677 -74604906 + L2 LINE L2 1905 2022 -1292 512 192 66 115 chr2 178651677 178651796 -74604787 + MER5B DNA MER1_type 4 112 -66 2342 98 0 9 chr2 178651796 178652112 -74604471 - AluSp SINE Alu 0 313 1 512 192 66 115 chr2 178652112 178652174 -74604409 + MER5B DNA MER1_type 112 176 -2 1018 269 297 8 chr2 178652174 178652620 -74603963 + L2 LINE L2 2022 2694 -620 264 224 20 157 chr2 178652616 178652701 -74603882 + L2 LINE L2 2808 2903 -410 * 2179 118 7 7 chr2 178652701 178653005 -74603578 - AluSx SINE Alu -8 304 1 1944 149 0 3 chr2 178653009 178653305 -74603278 - AluJb SINE Alu -7 305 11 264 224 20 157 chr2 178653305 178653361 -74603222 + L2 LINE L2 2906 2934 -379 2302 80 3 17 chr2 178653669 178653970 -74602613 - AluSp SINE Alu -16 297 1 804 293 12 12 chr2 178653973 178654215 -74602368 - MIR SINE MIR -12 250 9 21 36 0 0 chr2 178654771 178654799 -74601784 + AT_rich Low_complexity Low_complexity 1 28 0 1282 115 0 22 chr2 178655548 178655684 -74600899 + AluSq SINE Alu 1 134 -179 2108 141 0 3 chr2 178655684 178655989 -74600594 + AluSx SINE Alu 1 304 -8 1282 115 0 22 chr2 178655989 178656034 -74600549 + AluSq SINE Alu 134 178 -135 237 139 14 167 chr2 178656034 178656106 -74600477 + AluYb8 SINE Alu 239 299 -9 180 0 0 0 chr2 178656696 178656716 -74599867 + (T)n Simple_repeat Simple_repeat 1 20 0 2486 162 41 0 chr2 178657309 178657722 -74598861 - MSTB1 LTR MaLR -2 430 1 181 377 131 0 chr2 178657736 178657935 -74598648 + L2 LINE L2 964 1188 -2126 1377 224 154 2 chr2 178658015 178658470 -74598113 + L1MC4 LINE L1 7130 7653 -389 1775 179 0 6 chr2 178658510 178658823 -74597760 + AluJo SINE Alu 1 311 -1 305 250 0 0 chr2 178658870 178658950 -74597633 + L1MC4 LINE L1 7956 8035 -7 679 307 66 55 chr2 178659285 178659741 -74596842 - L1M4 LINE L1 -744 5402 4942 1923 203 51 25 chr2 178659745 178660232 -74596351 + MLT1D LTR MaLR 1 500 -5 2375 94 3 0 chr2 178660234 178660541 -74596042 + AluSp SINE Alu 2 309 -4 2240 78 0 4 chr2 178660707 178661011 -74595572 - AluY SINE Alu 0 303 1 329 347 77 70 chr2 178661025 178661736 -74594847 + L2 LINE L2 2509 3226 -46 631 241 118 15 chr2 178661871 178662066 -74594517 + MARNA DNA Mariner 245 459 -127 462 298 68 19 chr2 178662228 178662433 -74594150 + MER20 DNA MER1_type 1 215 -4 2465 97 0 0 chr2 178662650 178662960 -74593623 + AluSg SINE Alu 1 310 0 562 248 14 35 chr2 178663580 178663725 -74592858 + L2 LINE L2 3172 3313 0 2105 105 20 17 chr2 178664160 178664296 -74592287 + AluSx SINE Alu 1 135 -177 2248 108 3 10 chr2 178664296 178664603 -74591980 + AluSg SINE Alu 1 305 -5 2105 105 20 17 chr2 178664603 178664762 -74591821 + AluSx SINE Alu 135 297 -15 2042 102 4 4 chr2 178665038 178665312 -74591271 - AluSg SINE Alu -11 299 26 256 195 57 138 chr2 178665606 178665729 -74590854 - MLT1J LTR MaLR -155 356 244 617 85 0 0 chr2 178665746 178665828 -74590755 + AluJ/FRAM SINE Alu 222 303 -9 1192 268 103 0 chr2 178665891 178666220 -74590363 + MER69 DNA AcHobo 79 441 -2085 2236 183 78 38 chr2 178666224 178666754 -74589829 + MER69 DNA AcHobo 1889 2449 -77 2151 113 14 0 chr2 178666754 178667046 -74589537 + AluSx SINE Alu 1 296 -16 2236 183 78 38 chr2 178667046 178667127 -74589456 + MER69 DNA AcHobo 2449 2525 -1 1071 180 5 50 chr2 178667159 178667381 -74589202 + AluJb SINE Alu 1 212 -100 227 158 0 0 chr2 178667812 178667850 -74588733 - MER103 DNA DNA -126 40 3 1697 168 7 7 chr2 178667907 178668192 -74588391 - AluJb SINE Alu -18 294 10 2365 87 3 3 chr2 178668270 178668581 -74588002 + AluY SINE Alu 1 311 0 2496 56 0 16 chr2 178669266 178669572 -74587011 - AluY SINE Alu -9 302 2 2323 98 3 13 chr2 178669575 178669891 -74586692 - AluSq SINE Alu 0 313 1 206 289 0 0 chr2 178670101 178670146 -74586437 - MER91 DNA MER1_type 0 140 96 2711 39 0 0 chr2 178670408 178670719 -74585864 + AluY SINE Alu 1 311 0 2537 50 3 0 chr2 178671094 178671395 -74585188 + AluY SINE Alu 1 302 -9 1701 137 80 43 chr2 178671639 178671939 -74584644 + AluSx SINE Alu 1 311 -1 315 71 0 0 chr2 178671939 178671981 -74584602 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 2143 123 0 0 chr2 178671995 178672287 -74584296 - AluSx SINE Alu -18 294 3 213 239 0 0 chr2 178673316 178673362 -74583221 + MER5A DNA MER1_type 6 51 -138 2138 140 0 0 chr2 178673369 178673677 -74582906 + AluSx SINE Alu 1 308 -4 389 258 32 65 chr2 178673683 178673838 -74582745 + MER5A DNA MER1_type 40 189 0 259 313 0 0 chr2 178673872 178673939 -74582644 + L2 LINE L2 3232 3298 -15 1650 191 10 10 chr2 178675104 178675398 -74581185 + AluJb SINE Alu 4 297 -15 727 217 84 0 chr2 178676441 178676584 -74579999 + FAM SINE Alu 2 156 -19 2335 98 0 7 chr2 178676751 178677056 -74579527 - AluSx SINE Alu -9 303 1 457 338 95 23 chr2 178677340 178677645 -74578938 - L3 LINE CR1 -41 1536 1210 200 315 11 22 chr2 178677663 178677755 -74578828 - L3 LINE CR1 -505 1072 982 563 12 35 12 chr2 178677766 178677851 -74578732 + (TCTA)n Simple_repeat Simple_repeat 1 87 0 527 122 0 0 chr2 178677958 178678040 -74578543 - MER53 DNA DNA -2 187 106 2369 71 14 0 chr2 178678046 178678340 -74578243 + AluSp SINE Alu 1 298 -15 2008 121 0 11 chr2 178678347 178678652 -74577931 + AluSg SINE Alu 2 303 0 23 33 0 0 chr2 178678929 178678959 -74577624 + AT_rich Low_complexity Low_complexity 1 30 0 2801 148 21 31 chr2 178679047 178679528 -74577055 - L1MB2 LINE L1 -4 6167 5692 2140 119 0 13 chr2 178679640 178679943 -74576640 + AluSx SINE Alu 1 299 -13 365 264 117 59 chr2 178680215 178680454 -74576129 + L1MC4 LINE L1 6769 7021 -1021 2140 115 20 0 chr2 178680549 178680845 -74575738 + AluSx SINE Alu 1 302 -10 815 214 0 0 chr2 178680937 178681091 -74575492 + AluJb SINE Alu 135 288 -24 2619 229 66 27 chr2 178681177 178681196 -74575387 + HsTC2c DNA Tc2 8 25 -1873 1891 170 0 3 chr2 178681196 178681496 -74575087 - AluJb SINE Alu -13 299 1 2619 229 66 27 chr2 178681496 178682171 -74574412 + HsTC2c DNA Tc2 25 729 0 6154 125 40 0 chr2 178682625 178683571 -74573012 + L1MC1 LINE L1 5345 6328 -5 1973 113 0 22 chr2 178683625 178683899 -74572684 - AluSq SINE Alu -45 268 1 21 36 0 0 chr2 178684201 178684229 -74572354 + AT_rich Low_complexity Low_complexity 1 28 0 320 339 35 6 chr2 178684411 178684582 -74572001 + L1ME LINE L1 5589 5764 -357 1942 256 132 11 chr2 178684586 178685216 -74571367 + L1MC4a LINE L1 5460 6165 -1643 239 280 63 21 chr2 178685231 178685374 -74571209 + L1ME LINE L1 5760 5908 -213 2210 165 11 19 chr2 178685437 178685812 -74570771 + MLT1B LTR MaLR 16 387 -3 678 140 279 7 chr2 178686151 178686287 -74570296 - FAM SINE Alu -2 173 1 2303 86 0 3 chr2 178687428 178687720 -74568863 - AluSg SINE Alu -19 291 1 2169 100 24 3 chr2 178687722 178688012 -74568571 - AluSx SINE Alu -16 296 1 231 241 35 0 chr2 178688133 178688191 -74568392 + C-rich Low_complexity Low_complexity 1 60 0 265 283 28 103 chr2 178688392 178688537 -74568046 + MIR3 SINE MIR 8 141 -67 24 32 0 0 chr2 178688949 178688980 -74567603 + AT_rich Low_complexity Low_complexity 1 31 0 181 296 148 12 chr2 178688980 178689061 -74567522 + L3 LINE CR1 546 637 -940 1873 161 19 13 chr2 178689065 178689375 -74567208 - AluJb SINE Alu 0 312 1 28 0 0 0 chr2 178689381 178689409 -74567174 + AT_rich Low_complexity Low_complexity 1 28 0 897 165 181 27 chr2 178689413 178689601 -74566982 + AluJo SINE Alu 5 221 -91 1311 149 18 36 chr2 178689605 178689826 -74566757 - AluJo SINE Alu -22 290 74 1251 117 22 0 chr2 178689918 178690098 -74566485 + AluJo SINE Alu 120 303 -9 321 276 31 6 chr2 178690102 178690229 -74566354 + MIR SINE MIR 37 169 -39 1005 179 16 21 chr2 178690392 178690582 -74566001 - MER5A DNA MER1_type 0 189 1 1869 170 0 0 chr2 178690815 178691109 -74565474 - AluJo SINE Alu -14 298 5 923 236 63 8 chr2 178691814 178692051 -74564532 - MIR SINE MIR -5 257 8 2631 53 0 0 chr2 178692067 178692371 -74564212 + AluY SINE Alu 1 304 -7 2348 178 46 33 chr2 178692451 178692911 -74563672 + MLT1C LTR MaLR 1 466 -1 289 266 0 0 chr2 178693034 178693098 -74563485 + L2 LINE L2 3209 3272 0 415 117 0 0 chr2 178693778 178693838 -74562745 - MLT1D LTR MaLR -1 504 445 2147 119 3 7 chr2 178693844 178694179 -74562404 + AluSc SINE Alu 1 309 0 1274 123 31 35 chr2 178694180 178694371 -74562212 + L1MB2 LINE L1 5936 6127 -44 1674 172 10 111 chr2 178694371 178694777 -74561806 - MLT1A1 LTR MaLR 0 365 1 1274 123 31 35 chr2 178694777 178694813 -74561770 + L1MB2 LINE L1 6127 6162 -9 372 214 254 16 chr2 178694837 178694963 -74561620 - MIR SINE MIR -92 170 15 1555 199 80 84 chr2 178695006 178695256 -74561327 - MLT1D LTR MaLR -52 453 204 1824 176 21 61 chr2 178695256 178695477 -74561106 - MLT1A1 LTR MaLR 0 365 164 2170 135 0 0 chr2 178695477 178695773 -74560810 - AluSx SINE Alu -16 296 1 1824 176 21 61 chr2 178695773 178695927 -74560656 - MLT1A1 LTR MaLR -201 164 5 1555 199 80 84 chr2 178695927 178696129 -74560454 - MLT1D LTR MaLR -301 204 3 1772 231 117 8 chr2 178696167 178696638 -74559945 + MLT1F LTR MaLR 3 524 -18 27 0 0 0 chr2 178696742 178696769 -74559814 + AT_rich Low_complexity Low_complexity 1 27 0 838 115 0 0 chr2 178696789 178696902 -74559681 + FLAM_C SINE Alu 14 126 -17 240 349 0 12 chr2 178697069 178697155 -74559428 + MLT1K LTR MaLR 3 87 -501 1353 197 41 56 chr2 178697495 178697835 -74558748 - MLT1B LTR MaLR -43 347 13 632 322 50 31 chr2 178697867 178698187 -74558396 + MLT1I LTR MaLR 71 396 -13 1359 165 28 16 chr2 178698194 178698470 -74558113 - AluJb SINE Alu 0 312 35 1214 97 24 24 chr2 178698473 178698680 -74557903 - L1MA4 LINE L1 -1 6299 6093 225 0 0 0 chr2 178698680 178698705 -74557878 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2153 124 0 0 chr2 178698705 178698987 -74557596 - AluSx SINE Alu -30 282 1 3931 137 27 21 chr2 178698989 178699354 -74557229 - L1MA4 LINE L1 -614 5686 5325 2174 125 3 0 chr2 178699354 178699651 -74556932 - AluSx SINE Alu -13 299 2 3931 137 27 21 chr2 178699651 178700389 -74556194 - L1MA4 LINE L1 -975 5325 4560 3565 180 86 34 chr2 178700428 178701633 -74554950 + L1M4 LINE L1 4495 5769 -409 771 166 53 20 chr2 178701681 178701832 -74554751 - L1MC4 LINE L1 -1180 6862 6707 427 245 41 0 chr2 178702009 178702107 -74554476 + MLT1I LTR MaLR 308 409 0 1074 204 139 109 chr2 178703044 178703504 -74553079 + MLT1K LTR MaLR 1 474 -2 2316 120 0 0 chr2 178703766 178704074 -74552509 + AluSx SINE Alu 1 308 -4 1442 200 15 4 chr2 178704161 178704431 -74552152 + AluJo SINE Alu 18 290 -22 222 315 90 9 chr2 178704443 178704554 -74552029 - MIR SINE MIR -76 186 67 3337 157 11 17 chr2 178706078 178706612 -74549971 + LTR26B LTR ERV1 1 531 0 899 182 58 70 chr2 178706965 178707352 -74549231 - MLT1C LTR MaLR -27 440 1 2261 98 23 0 chr2 178707638 178707944 -74548639 + AluSp SINE Alu 1 313 0 274 296 17 47 chr2 178707989 178708161 -74548422 - L1ME LINE L1 -324 5780 5614 227 253 91 26 chr2 178708271 178708425 -74548158 - L1ME LINE L1 -2634 3495 3332 240 197 45 15 chr2 178708425 178708491 -74548092 - MER116 DNA Mariner -12 68 1 699 272 129 39 chr2 178708503 178709315 -74547268 - L1ME LINE L1 -2812 3317 2433 302 236 52 89 chr2 178709624 178709815 -74546768 - L1ME LINE L1 -5934 185 2 420 244 59 13 chr2 178710011 178710174 -74546409 - MIR SINE MIR -65 143 1 351 0 0 0 chr2 178710275 178710314 -74546269 + (GA)n Simple_repeat Simple_repeat 1 39 0 342 0 0 0 chr2 178710313 178710351 -74546232 + (TG)n Simple_repeat Simple_repeat 2 39 0 * 349 231 121 0 chr2 178710848 178710939 -74545644 - MLT1L LTR MaLR -31 584 483 2204 133 51 8 chr2 178710945 178711299 -74545284 - MER39 LTR ERV1 0 707 339 880 211 78 32 chr2 178711299 178711533 -74545050 - MER39 LTR ERV1 -426 227 1 * 1104 279 57 40 chr2 178711533 178711819 -74544764 - MLT1L LTR MaLR -136 479 180 2244 127 0 0 chr2 178711819 178712127 -74544456 + AluSx SINE Alu 1 308 -4 1104 279 57 40 chr2 178712127 178712311 -74544272 - MLT1L LTR MaLR -435 180 1 308 314 48 19 chr2 178712587 178712692 -74543891 + MLT1K LTR MaLR 125 232 -356 342 0 0 0 chr2 178712741 178712779 -74543804 + (T)n Simple_repeat Simple_repeat 1 38 0 209 125 25 0 chr2 178712888 178712928 -74543655 + (CAAA)n Simple_repeat Simple_repeat 4 44 0 423 246 162 12 chr2 178712953 178713120 -74543463 + MLT1K LTR MaLR 393 584 -4 1914 228 117 60 chr2 178713194 178713248 -74543335 - LTR41 LTR ERVL -3 770 720 2068 104 0 40 chr2 178713248 178713592 -74542991 - AluSx SINE Alu 0 332 1 1914 228 117 60 chr2 178713592 178714263 -74542320 - LTR41 LTR ERVL -53 720 3 2002 142 69 6 chr2 178714600 178714917 -74541666 + MER1B DNA MER1_type 1 337 0 1697 150 3 28 chr2 178715135 178715421 -74541162 - AluJo SINE Alu -33 279 1 232 89 22 22 chr2 178715480 178715525 -74541058 + (GAGAA)n Simple_repeat Simple_repeat 3 47 0 2334 101 0 0 chr2 178715525 178715822 -74540761 + AluSg SINE Alu 1 297 -13 2026 111 0 90 chr2 178716323 178716666 -74539917 + AluSq SINE Alu 1 312 -1 554 295 118 38 chr2 178716681 178716918 -74539665 + L3 LINE CR1 1298 1553 -24 215 291 247 11 chr2 178717051 178717233 -74539350 - MIR SINE MIR -36 226 2 33 0 0 0 chr2 178717679 178717712 -74538871 + AT_rich Low_complexity Low_complexity 1 33 0 1743 185 0 13 chr2 178717716 178718024 -74538559 - AluJo SINE Alu -7 305 2 230 143 24 0 chr2 178718200 178718242 -74538341 + MER57A LTR ERV1 295 337 -66 2164 119 0 13 chr2 178718281 178718583 -74538000 - AluSx SINE Alu -14 298 1 300 125 71 0 chr2 178718586 178718642 -74537941 - LTR23 LTR ERV1 -138 299 240 935 143 8 8 chr2 178718712 178718845 -74537738 + FLAM_C SINE Alu 1 133 0 1109 153 107 5 chr2 178718853 178719069 -74537514 - LTR23 LTR ERV1 -199 238 1 239 238 16 63 chr2 178719288 178719351 -74537232 - MIR3 SINE MIR -23 185 126 2364 89 0 0 chr2 178719580 178719873 -74536710 - AluSg SINE Alu -17 293 1 1106 234 31 32 chr2 178720023 178720446 -74536137 + MER21B LTR ERV1 8 394 -469 2390 188 70 54 chr2 178720446 178721040 -74535543 - LTR26E LTR ERV1 0 622 16 2384 198 73 78 chr2 178721040 178721768 -74534815 + LTR8A LTR ERV1 1 724 -3 2390 188 70 54 chr2 178721768 178721785 -74534798 - LTR26E LTR ERV1 -606 16 1 1382 224 45 62 chr2 178721785 178722179 -74534404 + MER21B LTR ERV1 391 779 -84 5289 94 8 26 chr2 178722179 178722882 -74533701 - LTR8 LTR ERV1 0 691 1 1382 224 45 62 chr2 178722882 178722905 -74533678 + MER21B LTR ERV1 779 801 -62 1989 174 138 35 chr2 178723085 178723312 -74533271 - MER69 DNA AcHobo 0 2526 2324 2131 130 3 13 chr2 178723312 178723628 -74532955 - AluSq SINE Alu 0 313 1 1989 174 138 35 chr2 178723628 178723950 -74532633 - MER69 DNA AcHobo -202 2324 1920 1817 245 30 12 chr2 178723945 178724377 -74532206 - MER69 DNA AcHobo -2083 443 4 * 198 350 0 0 chr2 178724377 178724437 -74532146 + L2 LINE L2 3213 3272 0 465 252 65 118 chr2 178725452 178725698 -74530885 + LTR67 LTR ERVL 5 237 -320 246 224 0 0 chr2 178725705 178725754 -74530829 + LTR67 LTR ERVL 490 538 -19 1487 196 18 0 chr2 178725889 178726164 -74530419 + AluJo SINE Alu 1 280 -32 408 227 118 17 chr2 178726225 178726344 -74530239 - MIR3 SINE MIR -63 145 15 2157 116 3 3 chr2 178726359 178726660 -74529923 - AluSq SINE Alu -12 301 1 2371 65 0 3 chr2 178726750 178727043 -74529540 + AluY SINE Alu 1 292 -19 2764 148 75 2 chr2 178727913 178728394 -74528189 - L1MC3 LINE L1 -8 7777 7262 1871 136 0 48 chr2 178728480 178728651 -74527932 - AluJb SINE Alu 0 301 149 2225 127 0 6 chr2 178728651 178728966 -74527617 - AluSq SINE Alu 0 313 1 1871 136 0 48 chr2 178728966 178729109 -74527474 - AluJb SINE Alu -152 149 1 235 351 45 60 chr2 178729900 178730034 -74526549 + L3b LINE CR1 1393 1524 -59 377 164 30 0 chr2 178730041 178730108 -74526475 - LTR67 LTR ERVL 0 557 489 1285 231 14 32 chr2 178730125 178730407 -74526176 + MER58B DNA MER1_type 30 306 -35 1719 180 29 38 chr2 178730493 178730866 -74525717 - MLT1A2 LTR MaLR 0 428 1 1116 266 64 44 chr2 178730867 178731321 -74525262 - LTR67 LTR ERVL -43 514 52 3230 141 131 49 chr2 178731568 178731785 -74524798 + LTR48 LTR ERV1 2 200 -395 2476 88 0 0 chr2 178731785 178732093 -74524490 + AluSg SINE Alu 1 308 -2 3230 141 131 49 chr2 178732093 178732585 -74523998 + LTR48 LTR ERV1 200 582 -13 2290 85 0 10 chr2 178732734 178733029 -74523554 + AluSc SINE Alu 1 292 -17 378 0 0 0 chr2 178733029 178733071 -74523512 + (TG)n Simple_repeat Simple_repeat 1 42 0 1535 143 0 56 chr2 178733084 178733224 -74523359 - AluJb SINE Alu -39 273 152 2358 96 3 0 chr2 178733224 178733536 -74523047 - AluSp SINE Alu 0 313 1 1535 143 0 56 chr2 178733536 178733647 -74522936 - AluJb SINE Alu -160 152 36 981 102 34 28 chr2 178733647 178733823 -74522760 - L1MA3 LINE L1 -208 6097 5921 3945 251 57 13 chr2 178733823 178735096 -74521487 + L1MEc LINE L1 657 1985 -4411 1433 117 5 0 chr2 178735098 178735294 -74521289 + AluSq SINE Alu 1 197 -116 1276 153 0 0 chr2 178735293 178735482 -74521101 + AluSc SINE Alu 109 297 -12 * 2265 108 0 3 chr2 178735487 178735793 -74520790 + AluSg SINE Alu 6 310 0 3162 181 94 34 chr2 178735796 178736552 -74520031 + L1ME1 LINE L1 5287 6087 -79 1549 148 79 92 chr2 178736552 178737157 -74519426 + MER4C LTR ERV1 1 465 0 352 204 0 34 chr2 178737157 178737245 -74519338 + L1MA9 LINE L1 6228 6312 0 2251 96 0 0 chr2 178737281 178737573 -74519010 + AluSq SINE Alu 1 292 -21 2430 77 0 0 chr2 178738457 178738755 -74517828 - AluY SINE Alu -11 300 3 1436 127 19 5 chr2 178738767 178738980 -74517603 - AluSg/x SINE Alu -8 304 89 2342 102 3 0 chr2 178738988 178739293 -74517290 - AluSp SINE Alu -7 306 1 922 126 15 7 chr2 178740137 178740272 -74516311 + AluJo SINE Alu 1 136 -176 333 0 0 0 chr2 178740408 178740445 -74516138 + (CA)n Simple_repeat Simple_repeat 2 38 0 209 182 0 0 chr2 178740450 178740483 -74516100 + (TATG)n Simple_repeat Simple_repeat 2 34 0 436 230 115 0 chr2 178740583 178740696 -74515887 - LTR33 LTR ERVL -7 514 389 253 176 51 209 chr2 178740704 178740837 -74515746 - MER69 DNA AcHobo -9 2517 2365 2508 63 0 0 chr2 178740837 178741137 -74515446 + AluY SINE Alu 1 300 -11 1210 177 0 0 chr2 178741144 178741319 -74515264 + FAM SINE Alu 1 175 0 253 176 51 209 chr2 178741319 178741473 -74515110 - MER69 DNA AcHobo -167 2359 2269 1262 116 97 42 chr2 178741476 178741692 -74514891 - AluJo SINE Alu 0 312 85 384 186 105 0 chr2 178741697 178741783 -74514800 - MER69 DNA AcHobo -270 2256 2162 858 185 0 0 chr2 178742016 178742162 -74514421 + FRAM SINE Alu 20 165 -11 941 304 38 69 chr2 178742170 178742731 -74513852 + L2 LINE L2 2722 3270 -2 201 216 136 11 chr2 178742733 178742821 -74513762 - MIR SINE MIR -18 244 146 819 231 42 139 chr2 178742828 178742974 -74513609 + MER34B LTR ERV1 4 163 -402 808 154 0 8 chr2 178742974 178743091 -74513492 + FLAM_C SINE Alu 2 117 -16 819 231 42 139 chr2 178743091 178743137 -74513446 + MER34B LTR ERV1 163 212 -353 216 0 0 0 chr2 178743137 178743161 -74513422 + (TC)n Simple_repeat Simple_repeat 1 24 0 819 231 42 139 chr2 178743161 178743448 -74513135 + MER34B LTR ERV1 212 437 -128 397 237 119 41 chr2 178743451 178743645 -74512938 + MER34B LTR ERV1 357 565 0 212 239 0 0 chr2 178743646 178743692 -74512891 - MIR SINE MIR -123 139 94 1318 288 56 28 chr2 178743872 178744411 -74512172 + L2 LINE L2 1841 2394 -920 1006 233 147 3 chr2 178744411 178744720 -74511863 - MLT1G3 LTR MaLR 0 595 191 897 170 6 38 chr2 178744722 178744881 -74511702 - FRAM SINE Alu -12 154 1 1537 131 4 4 chr2 178744894 178745123 -74511460 - AluSg SINE Alu -18 292 64 2397 100 3 0 chr2 178745123 178745432 -74511151 + AluSq SINE Alu 1 310 -3 491 173 13 0 chr2 178745432 178745507 -74511076 - AluS SINE Alu -236 77 2 423 285 42 20 chr2 178745514 178745694 -74510889 - MLT1G LTR MaLR -321 234 42 2450 146 23 48 chr2 178745694 178746133 -74510450 - MSTA LTR MaLR 0 428 1 636 261 241 27 chr2 178746148 178746755 -74509828 + L2 LINE L2 2586 3305 -8 543 43 0 0 chr2 178746761 178746831 -74509752 + (TAGA)n Simple_repeat Simple_repeat 4 73 0 207 286 0 0 chr2 178747618 178747681 -74508902 + T-rich Low_complexity Low_complexity 1 63 0 2492 62 0 10 chr2 178748491 178748796 -74507787 - AluY SINE Alu -4 307 6 948 210 6 11 chr2 178749728 178749904 -74506679 - FAM SINE Alu 0 175 1 2027 137 3 16 chr2 178749935 178750249 -74506334 - AluJo SINE Alu -2 310 1 1044 181 42 23 chr2 178750323 178750538 -74506045 - L1PA16 LINE L1 -8 6158 5940 451 165 13 0 chr2 178750542 178750621 -74505962 - L1MC4 LINE L1 -14 8028 7949 199 255 0 0 chr2 178750746 178750793 -74505790 - MIR SINE MIR -109 153 107 402 343 41 30 chr2 178751138 178751307 -74505276 - MIR3 SINE MIR 0 208 38 565 147 95 17 chr2 178751359 178751475 -74505108 + L1M3 LINE L1 5568 5692 -491 1977 130 10 7 chr2 178751479 178751772 -74504811 - AluJo SINE Alu -18 294 1 1697 180 42 68 chr2 178751779 178752179 -74504404 - MLT1B LTR MaLR 0 390 1 2303 94 7 0 chr2 178752192 178752491 -74504092 - AluSp SINE Alu -12 301 1 241 132 38 0 chr2 178752491 178752544 -74504039 + L1MC2 LINE L1 6280 6334 -10 4087 84 16 14 chr2 178752562 178753133 -74503450 + L1MA3 LINE L1 5734 6305 0 360 117 31 239 chr2 178753143 178753306 -74503277 + L1MEc LINE L1 1017 1145 -5251 257 250 94 21 chr2 178753863 178753959 -74502624 + L1MEc LINE L1 1152 1254 -5142 1698 157 79 23 chr2 178753970 178754313 -74502270 - MLT1B LTR MaLR 0 390 29 1702 254 65 36 chr2 178754321 178754956 -74501627 + L1MEc LINE L1 1256 1908 -4488 4324 132 50 6 chr2 178754960 178755682 -74500901 + Tigger2 DNA MER2_type 1 754 -1964 1320 140 34 72 chr2 178755742 178756007 -74500576 + Tigger2 DNA MER2_type 2464 2718 0 1830 155 3 7 chr2 178756293 178756597 -74499986 + AluJb SINE Alu 5 307 -5 196 293 23 45 chr2 178756924 178757057 -74499526 + L2 LINE L2 3089 3218 -95 204 235 0 0 chr2 178757364 178757415 -74499168 + T-rich Low_complexity Low_complexity 1 51 0 595 219 6 12 chr2 178757701 178757865 -74498718 + L1ME4a LINE L1 5723 5885 -236 333 267 99 0 chr2 178757922 178758053 -74498530 + L1ME4a LINE L1 5978 6121 0 23 0 0 0 chr2 178758056 178758079 -74498504 + AT_rich Low_complexity Low_complexity 1 23 0 771 227 116 23 chr2 178758113 178758193 -74498390 + MIR SINE MIR 26 97 -165 1801 188 0 6 chr2 178758193 178758507 -74498076 - AluJb SINE Alu 0 312 1 771 227 116 23 chr2 178758507 178758642 -74497941 + MIR SINE MIR 97 261 -1 303 276 0 22 chr2 178759018 178759114 -74497469 - MIR SINE MIR -82 126 34 2147 117 0 3 chr2 178759117 178759417 -74497166 - AluSx SINE Alu -13 299 1 2290 98 0 0 chr2 178759448 178759743 -74496840 - AluSc SINE Alu -14 295 1 250 302 47 0 chr2 178760453 178760539 -74496044 + MIR SINE MIR 163 252 -10 334 309 82 0 chr2 178761091 178761188 -74495395 + L2 LINE L2 3208 3312 -1 404 239 85 15 chr2 178761393 178761523 -74495060 - MIR SINE MIR -49 213 75 375 217 283 0 chr2 178761521 178761627 -74494956 + L2 LINE L2 3177 3312 -1 * 303 268 62 21 chr2 178761724 178761821 -74494762 - MIR SINE MIR -68 140 40 2409 92 20 0 chr2 178762300 178762606 -74493977 + AluSq SINE Alu 1 312 -1 207 114 0 0 chr2 178762710 178762745 -74493838 + (TAAA)n Simple_repeat Simple_repeat 1 35 0 196 318 68 0 chr2 178765034 178765122 -74491461 - L2 LINE L2 0 3313 3220 327 269 0 21 chr2 178765255 178765348 -74491235 - L2 LINE L2 -3 3310 3220 299 290 21 21 chr2 178765956 178766049 -74490534 + L2 LINE L2 3176 3268 -4 1967 88 22 60 chr2 178766111 178766336 -74490247 + HSMAR2 DNA Mariner 2 213 -1089 2147 122 7 0 chr2 178766336 178766639 -74489944 + AluSx SINE Alu 1 305 -7 1967 88 22 60 chr2 178766639 178766732 -74489851 + HSMAR2 DNA Mariner 213 308 -994 801 119 9 0 chr2 178766732 178766841 -74489742 - FLAM_C SINE Alu -32 111 2 1522 114 0 77 chr2 178766848 178766880 -74489703 + HSMAR2 DNA Mariner 1050 1083 -219 1815 173 3 10 chr2 178766880 178767181 -74489402 + AluJo SINE Alu 1 299 -13 1522 114 0 77 chr2 178767181 178767237 -74489346 + HSMAR2 DNA Mariner 1083 1142 -160 2066 114 3 57 chr2 178767237 178767553 -74489030 + AluSx SINE Alu 1 299 -13 1522 114 0 77 chr2 178767553 178767736 -74488847 + HSMAR2 DNA Mariner 1142 1301 -1 494 129 0 112 chr2 178767753 178767916 -74488667 - L1 LINE L1 -3159 2987 2851 2096 104 38 7 chr2 178768108 178768395 -74488188 - AluSx SINE Alu -16 296 1 584 246 151 0 chr2 178768525 178768704 -74487879 + MIR SINE MIR 49 254 -8 2386 100 0 3 chr2 178768707 178769018 -74487565 + AluSg SINE Alu 1 310 0 545 246 115 26 chr2 178769088 178769279 -74487304 + MIR SINE MIR 30 237 -25 443 273 45 119 chr2 178769290 178769601 -74486982 - L2 LINE L2 -94 3219 2932 2293 122 0 0 chr2 178770104 178770408 -74486175 - AluSx SINE Alu -4 308 5 654 238 113 13 chr2 178770822 178771053 -74485530 + LTR33 LTR ERVL 262 515 -6 1454 177 9 84 chr2 178771081 178771279 -74485304 - MER33 DNA MER1_type -2266 319 108 2241 103 7 0 chr2 178771279 178771581 -74485002 - AluSx SINE Alu -8 304 1 2010 146 7 3 chr2 178771590 178771885 -74484698 - AluSx SINE Alu -16 296 1 1454 177 9 84 chr2 178771885 178772021 -74484562 - MER33 DNA MER1_type -2485 100 1 243 348 120 0 chr2 178772023 178772115 -74484468 - L2 LINE L2 -42 3230 3128 1721 180 0 0 chr2 178772922 178773228 -74483355 + AluJo SINE Alu 1 306 0 405 0 0 0 chr2 178774325 178774370 -74482213 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 2185 102 3 3 chr2 178774423 178774718 -74481865 + AluSc SINE Alu 1 295 -14 442 273 98 0 chr2 178775262 178775394 -74481189 - MIR SINE MIR -29 233 89 764 290 73 13 chr2 178775394 178775958 -74480625 + L1ME4a LINE L1 5307 5949 -172 447 273 36 14 chr2 178776147 178776286 -74480297 - MIR3 SINE MIR -3 205 64 2035 114 19 32 chr2 178776938 178777254 -74479329 + AluSx SINE Alu 1 312 0 214 220 80 0 chr2 178777840 178777890 -74478693 + MER5B DNA MER1_type 1 54 -124 286 215 46 0 chr2 178777957 178778022 -74478561 + MER5B DNA MER1_type 57 124 -54 1526 161 23 80 chr2 178778045 178778344 -74478239 - AluJo SINE Alu -30 282 1 240 258 0 16 chr2 178778346 178778408 -74478175 + MER5B DNA MER1_type 118 178 0 324 305 175 13 chr2 178778441 178778595 -74477988 - MER5A DNA MER1_type -4 185 7 2113 114 30 3 chr2 178778725 178779022 -74477561 - AluSg SINE Alu -5 305 1 203 0 37 0 chr2 178779045 178779072 -74477511 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 2248 100 0 0 chr2 178779075 178779364 -74477219 - AluSp SINE Alu -24 289 1 1201 161 138 28 chr2 178779391 178779682 -74476901 + MLT1A1 LTR MaLR 1 323 -42 1922 168 0 10 chr2 178780000 178780309 -74476274 + AluJo SINE Alu 1 306 -6 2410 91 0 0 chr2 178780724 178781033 -74475550 + AluSc SINE Alu 1 309 0 2442 86 0 0 chr2 178781140 178781441 -74475142 - AluSg SINE Alu -9 301 1 5524 152 21 25 chr2 178781450 178781904 -74474679 - L1MB3 LINE L1 -1 6182 5728 2109 135 90 40 chr2 178781904 178782281 -74474302 + MSTD LTR MaLR 1 396 0 5524 152 21 25 chr2 178782281 178782734 -74473849 - L1MB3 LINE L1 -455 5728 5275 1872 152 0 46 chr2 178782734 178783057 -74473526 - AluJo SINE Alu -2 310 3 5524 152 21 25 chr2 178783057 178783514 -74473069 - L1MB3 LINE L1 -908 5275 4818 259 341 0 45 chr2 178784079 178784206 -74472377 + L2 LINE L2 3150 3312 -1 33 0 0 0 chr2 178784281 178784314 -74472269 + AT_rich Low_complexity Low_complexity 1 33 0 219 104 30 30 chr2 178784314 178784381 -74472202 + (TTTA)n Simple_repeat Simple_repeat 1 67 0 64 0 0 0 chr2 178784381 178784445 -74472138 + AT_rich Low_complexity Low_complexity 1 64 0 2733 126 132 78 chr2 178784495 178785018 -74471565 - MLT2B3 LTR ERVL -1 553 3 328 30 60 15 chr2 178785047 178785114 -74471469 + (TA)n Simple_repeat Simple_repeat 2 71 0 469 368 81 0 chr2 178785122 178785345 -74471238 - MIR SINE MIR -1 261 21 2295 101 3 0 chr2 178786220 178786518 -74470065 - AluSq SINE Alu -12 301 3 901 127 76 40 chr2 178787079 178787288 -74469295 - LTR48 LTR ERV1 -30 740 412 2561 124 22 0 chr2 178787288 178787644 -74468939 + THE1B LTR MaLR 1 364 0 9989 95 36 1 chr2 178787650 178789000 -74467583 + THE1B-int LTR MaLR 7 1403 -177 2383 88 3 3 chr2 178789000 178789305 -74467278 + AluSp SINE Alu 1 305 -8 1874 72 0 0 chr2 178789318 178789539 -74467044 + AluSq SINE Alu 1 221 -92 470 213 0 0 chr2 178789539 178789619 -74466964 - AluS SINE Alu -231 81 2 339 73 0 0 chr2 178789619 178789660 -74466923 + THE1B LTR MaLR 324 364 0 2258 170 103 16 chr2 178789660 178790110 -74466473 - LTR48 LTR ERV1 -227 553 99 2285 101 7 0 chr2 178790110 178790408 -74466175 - AluSp SINE Alu -13 300 1 2258 170 103 16 chr2 178790408 178790517 -74466066 - LTR48 LTR ERV1 -681 99 1 2236 95 13 7 chr2 178790993 178791299 -74465284 - AluSq SINE Alu -5 308 1 185 343 15 0 chr2 178794565 178794632 -74461951 - L3 LINE CR1 -2 1575 1508 392 267 164 7 chr2 178794718 178794864 -74461719 + MIR SINE MIR 23 191 -71 1093 153 0 6 chr2 178797165 178797335 -74459248 - AluSc SINE Alu -52 257 89 2176 90 3 13 chr2 178797835 178798135 -74458448 - AluSg SINE Alu -13 297 1 3985 100 30 7 chr2 178798218 178798327 -74458256 - MER41A LTR ERV1 0 554 449 2480 73 0 25 chr2 178798327 178798643 -74457940 + AluY SINE Alu 1 308 -3 3985 100 30 7 chr2 178798643 178799075 -74457508 - MER41A LTR ERV1 -105 449 1 1979 166 0 0 chr2 178799099 178799406 -74457177 - AluJb SINE Alu -5 307 1 757 116 0 0 chr2 178800653 178800748 -74455835 + AluS SINE Alu 2 96 -216 1611 121 4 66 chr2 178800748 178801020 -74455563 + AluSx SINE Alu 54 308 -4 1457 210 24 30 chr2 178801066 178801361 -74455222 - AluJo SINE Alu -9 293 1 405 250 97 17 chr2 178803168 178803344 -74453239 + MER117 DNA MER1_type 1 190 -7 1133 133 0 12 chr2 178804385 178804550 -74452033 - AluSg/x SINE Alu -16 294 132 2052 116 16 19 chr2 178804550 178804861 -74451722 - AluSx SINE Alu -2 310 1 1966 126 20 36 chr2 178804861 178805163 -74451420 - AluSx SINE Alu -15 297 1 23 0 0 0 chr2 178806623 178806646 -74449937 + AT_rich Low_complexity Low_complexity 1 23 0 2339 92 0 0 chr2 178806985 178807280 -74449303 - AluSc SINE Alu -13 296 2 2182 103 10 0 chr2 178807297 178807589 -74448994 - AluSx SINE Alu -17 295 1 1802 188 0 0 chr2 178807760 178808058 -74448525 - AluJo SINE Alu -14 298 1 1059 153 0 25 chr2 178808162 178808325 -74448258 - AluJb SINE Alu -21 291 133 2397 90 3 10 chr2 178808958 178809270 -74447313 - AluSq SINE Alu -3 310 1 927 254 41 12 chr2 178809610 178809854 -74446729 + MIR SINE MIR 12 262 0 186 189 0 0 chr2 178809857 178809894 -74446689 + (TTA)n Simple_repeat Simple_repeat 1 37 0 351 0 0 0 chr2 178809944 178809983 -74446600 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 242 239 141 0 chr2 178811211 178811303 -74445280 + L1MC5 LINE L1 7821 7925 -36 2341 89 0 7 chr2 178811305 178811597 -74444986 - AluSx SINE Alu -22 290 1 2318 85 3 3 chr2 178811974 178812267 -74444316 - AluSg SINE Alu -17 293 1 1957 36 0 0 chr2 178812269 178812489 -74444094 - AluY SINE Alu -7 304 85 2093 119 13 3 chr2 178812736 178813039 -74443544 - AluSq SINE Alu -7 306 1 474 261 146 27 chr2 178813672 178814001 -74442582 + L1ME4a LINE L1 5313 5680 -441 470 285 32 16 chr2 178814023 178814209 -74442374 + L1ME4a LINE L1 5723 5911 -210 2323 107 0 7 chr2 178814228 178814538 -74442045 + AluSq SINE Alu 1 308 -5 258 205 196 18 chr2 178814541 178814653 -74441930 + L1ME4a LINE L1 5987 6118 -3 26 74 0 0 chr2 178815520 178815574 -74441009 + AT_rich Low_complexity Low_complexity 1 54 0 2358 87 7 3 chr2 178815791 178816089 -74440494 + AluSq SINE Alu 3 301 -12 2020 136 13 0 chr2 178816093 178816394 -74440189 + AluSx SINE Alu 1 305 -7 224 316 114 0 chr2 178816538 178816652 -74439931 - MIR3 SINE MIR -1 207 81 2503 64 0 0 chr2 178816920 178817215 -74439368 + AluSg SINE Alu 1 295 -15 1051 99 0 0 chr2 178817279 178817410 -74439173 - AluSq/x SINE Alu -180 132 2 250 275 24 66 chr2 178817579 178817707 -74438876 + L1MC4a LINE L1 5843 5960 -1848 306 0 0 0 chr2 178817707 178817741 -74438842 + (CA)n Simple_repeat Simple_repeat 2 35 0 250 275 24 66 chr2 178817741 178817823 -74438760 + L1MC4a LINE L1 5960 6044 -1764 23 33 0 0 chr2 178817891 178817921 -74438662 + AT_rich Low_complexity Low_complexity 1 30 0 742 147 16 23 chr2 178818765 178818894 -74437689 + FLAM_C SINE Alu 1 128 -5 287 263 19 6 chr2 178818896 178819021 -74437562 + L1ME3A LINE L1 5696 5822 -299 2086 110 3 0 chr2 178819030 178819355 -74437228 + AluSp SINE Alu 1 326 0 254 183 49 85 chr2 178819564 178819646 -74436937 + MIR3 SINE MIR 118 196 -12 675 293 59 28 chr2 178820002 178820255 -74436328 - MIR SINE MIR 0 262 2 2070 144 10 0 chr2 178821894 178822199 -74434384 - AluJb SINE Alu -4 308 1 1114 185 31 22 chr2 178824131 178824353 -74432230 - MER58A DNA MER1_type 0 224 1 536 175 8 175 chr2 178824424 178824676 -74431907 + L1ME3A LINE L1 5941 6150 -20 772 180 0 12 chr2 178824860 178825027 -74431556 - L1MB2 LINE L1 -7 6164 6000 2973 139 15 4 chr2 178825194 178825713 -74430870 - L1MB2 LINE L1 -168 6003 5479 39820 65 4 3 chr2 178825725 178831979 -74424604 - L1PA5 LINE L1 0 6154 11 1984 138 51 24 chr2 178831990 178832034 -74424549 - L1MA4 LINE L1 -122 6178 6137 1929 126 50 0 chr2 178832034 178832311 -74424272 - AluSx SINE Alu -21 291 1 1984 138 51 24 chr2 178832311 178832679 -74423904 - L1MA4 LINE L1 -163 6137 5755 * 6069 155 12 30 chr2 178832677 178832825 -74423758 + L1M1 LINE L1 4071 4220 -1926 2030 134 0 23 chr2 178832825 178833131 -74423452 - AluSx SINE Alu -13 299 1 6069 155 12 30 chr2 178833131 178833561 -74423022 + L1M1 LINE L1 4220 4657 -1489 1972 169 0 7 chr2 178833561 178833869 -74422714 - AluJo SINE Alu -6 306 1 6069 155 12 30 chr2 178833869 178833941 -74422642 + L1M1 LINE L1 4657 4729 -1417 2273 120 3 0 chr2 178833941 178834250 -74422333 + AluSq SINE Alu 1 310 -3 6069 155 12 30 chr2 178834250 178834880 -74421703 + L1M1 LINE L1 4729 5329 -817 286 137 20 0 chr2 178834880 178834931 -74421652 + Alu SINE Alu 1 52 -250 615 182 61 15 chr2 178834931 178835063 -74421520 + AluJb SINE Alu 162 299 -13 2619 109 2 12 chr2 178835064 178835484 -74421099 + L1M1 LINE L1 5325 5740 -560 1999 82 82 4 chr2 178835492 178835762 -74420821 - AluSc SINE Alu -18 291 1 674 294 69 9 chr2 178837417 178837635 -74418948 - MIR SINE MIR -26 236 6 204 371 71 16 chr2 178838048 178838301 -74418282 - L2 LINE L2 -649 2665 2399 335 21 43 0 chr2 178838428 178838475 -74418108 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 307 217 87 101 chr2 178839366 178839665 -74416918 + L1ME3A LINE L1 5601 5903 -218 207 0 0 0 chr2 178839665 178839688 -74416895 + (TA)n Simple_repeat Simple_repeat 2 24 0 2344 87 0 7 chr2 178839689 178839987 -74416596 - AluSx SINE Alu -16 296 1 307 217 87 101 chr2 178839987 178840030 -74416553 + L1ME3A LINE L1 5902 5940 -181 4457 84 5 2 chr2 178840905 178841490 -74415093 + LTR14C LTR ERVK 1 587 0 955 259 102 56 chr2 178841568 178842618 -74413965 + L1MEc LINE L1 343 1370 -5160 1021 165 32 0 chr2 178842623 178842781 -74413802 + AluJb SINE Alu 140 302 -10 1584 275 66 34 chr2 178842788 178843744 -74412839 + L1MEc LINE L1 1404 2390 -4331 5266 167 75 51 chr2 178843766 178844628 -74411955 + Charlie1a DNA MER1_type 47 887 -1874 673 180 8 0 chr2 178844628 178844750 -74411833 + FLAM_A SINE Alu 1 123 -10 5266 167 75 51 chr2 178844750 178844896 -74411687 + Charlie1a DNA MER1_type 887 1028 -1733 2325 85 0 3 chr2 178844896 178845202 -74411381 + AluY SINE Alu 1 305 -6 5266 167 75 51 chr2 178845202 178845561 -74411022 + Charlie1a DNA MER1_type 1028 1448 -7 322 222 91 91 chr2 178845568 178845658 -74410925 + L1MEc LINE L1 2342 2431 -4109 2350 99 0 0 chr2 178845658 178845951 -74410632 + AluSg SINE Alu 1 293 -17 322 222 91 91 chr2 178845951 178846058 -74410525 + L1MEc LINE L1 2430 2539 -4001 2395 60 0 0 chr2 178846382 178846687 -74409896 + AluY SINE Alu 1 305 0 355 289 67 15 chr2 178846724 178846859 -74409724 + L1ME3A LINE L1 5977 6118 -52 327 226 138 25 chr2 178846894 178847053 -74409530 - MER104 DNA MER2_type -3 177 1 2097 130 0 34 chr2 178847206 178847529 -74409054 - AluSx SINE Alu 0 312 1 1138 153 13 61 chr2 178847582 178847692 -74408891 - AluJo SINE Alu -90 222 127 417 39 0 0 chr2 178847692 178847743 -74408840 + (TTA)n Simple_repeat Simple_repeat 2 52 0 1138 153 13 61 chr2 178847743 178847860 -74408723 - AluJo SINE Alu -185 127 6 224 307 13 13 chr2 178847979 178848054 -74408529 - L2 LINE L2 -10 3262 3188 198 0 0 0 chr2 178848352 178848374 -74408209 + (TTA)n Simple_repeat Simple_repeat 3 24 0 8286 46 32 0 chr2 178848374 178850185 -74406398 - L1PA5 LINE L1 -18 6136 4291 357 260 20 13 chr2 178850196 178850346 -74406237 - L1MC4a LINE L1 -1878 5930 5780 956 206 48 67 chr2 178850359 178850689 -74405894 - L1ME1 LINE L1 -4 6162 5839 1557 180 25 9 chr2 178851247 178851570 -74405013 - L1MC4a LINE L1 -577 5589 5262 546 220 7 14 chr2 178851585 178851726 -74404857 + L1ME1 LINE L1 5803 5942 -224 20645 117 13 15 chr2 178852242 178853786 -74402797 + L1PA8 LINE L1 2024 3570 -2646 216 0 0 0 chr2 178853786 178853810 -74402773 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 20645 117 13 15 chr2 178853810 178854224 -74402359 + L1PA8 LINE L1 3570 3984 -2232 2362 108 3 0 chr2 178854224 178854531 -74402052 + AluSg SINE Alu 1 308 -2 20645 117 13 15 chr2 178854531 178857653 -74398930 + L1PA8 LINE L1 3984 5517 -699 2409 86 0 7 chr2 178857653 178857954 -74398629 - AluSc SINE Alu -10 299 1 20645 117 13 15 chr2 178857954 178858653 -74397930 + L1PA8 LINE L1 5517 6216 0 2274 98 0 16 chr2 178858663 178858979 -74397604 + AluSx SINE Alu 1 311 -1 468 206 58 111 chr2 178859206 178859449 -74397134 - MER112 DNA MER1_type -1 259 30 1928 161 29 3 chr2 178859711 178860096 -74396487 + L1MB5 LINE L1 5546 5940 -234 1829 134 7 14 chr2 178860096 178860407 -74396176 + AluJb SINE Alu 1 309 0 1800 167 0 7 chr2 178860428 178860703 -74395880 + AluJo SINE Alu 9 281 -31 21 0 0 0 chr2 178860703 178860724 -74395859 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr2 178860838 178860869 -74395714 + AT_rich Low_complexity Low_complexity 1 31 0 859 136 0 15 chr2 178861003 178861135 -74395448 + FLAM_C SINE Alu 1 130 -3 467 145 0 0 chr2 178861154 178861223 -74395360 + AluJ/FRAM SINE Alu 228 296 -16 210 376 0 10 chr2 178861794 178861895 -74394688 - MER5A DNA MER1_type 0 189 90 523 164 9 9 chr2 178862238 178862354 -74394229 - MER33 DNA MER1_type -4 320 205 1106 119 0 0 chr2 178862354 178862505 -74394078 + AluSx SINE Alu 1 151 -161 3852 136 95 18 chr2 178862537 178863266 -74393317 + LTR1 LTR ERV1 1 785 0 1074 119 0 31 chr2 178863266 178863426 -74393157 + AluSx SINE Alu 145 299 -11 21 0 0 0 chr2 178863426 178863447 -74393136 + AT_rich Low_complexity Low_complexity 1 21 0 601 178 124 45 chr2 178863461 178863663 -74392920 - MER33 DNA MER1_type -106 218 1 226 340 141 33 chr2 178863777 178864083 -74392500 + L2 LINE L2 2192 2530 -784 185 344 33 0 chr2 178864425 178864486 -74392097 - L2 LINE L2 -1 3271 3209 15463 105 20 42 chr2 178864501 178865110 -74391473 + Tigger1 DNA MER2_type 1 622 -1796 2029 144 23 0 chr2 178865110 178865415 -74391168 + AluJb SINE Alu 1 312 0 15463 105 20 42 chr2 178865415 178867279 -74389304 + Tigger1 DNA MER2_type 622 2418 0 2023 131 6 29 chr2 178868688 178869000 -74387583 + AluSx SINE Alu 2 306 -6 1550 199 80 0 chr2 178869011 178869298 -74387285 + AluJb SINE Alu 1 310 -2 25 31 0 0 chr2 178870586 178870618 -74385965 + AT_rich Low_complexity Low_complexity 1 32 0 2074 204 52 51 chr2 178871124 178871862 -74384721 + L1MEc LINE L1 2135 2829 -3386 1955 99 52 15 chr2 178871862 178872175 -74384408 + AluSx SINE Alu 1 323 0 2074 204 52 51 chr2 178872175 178872229 -74384354 + L1MEc LINE L1 2829 2881 -3334 388 247 61 52 chr2 178872236 178872467 -74384116 - L1M4 LINE L1 -3717 2429 2197 1605 224 30 68 chr2 178872474 178872724 -74383859 + L1MEc LINE L1 2890 3148 -3067 1304 204 118 0 chr2 178872724 178872994 -74383589 - AluSx SINE Alu -10 302 1 1605 224 30 68 chr2 178872994 178873104 -74383479 + L1MEc LINE L1 3148 3261 -2954 1404 175 0 117 chr2 178873104 178873446 -74383137 + AluJo SINE Alu 1 302 0 1605 224 30 68 chr2 178873446 178873790 -74382793 + L1MEc LINE L1 3261 3568 -2647 3038 150 10 69 chr2 178873803 178874699 -74381884 + L1MB3 LINE L1 5451 6275 -37 293 115 0 0 chr2 178874736 178874788 -74381795 + L1MB3 LINE L1 6019 6070 -113 893 146 0 0 chr2 178875729 178875859 -74380724 + FLAM_C SINE Alu 1 130 -3 412 311 105 34 chr2 178875928 178876137 -74380446 - MIR SINE MIR -18 244 21 357 237 133 15 chr2 178877644 178877779 -74378804 + MLT1L LTR MaLR 436 586 -29 315 375 48 65 chr2 178877793 178878129 -74378454 - L2 LINE L2 -52 3220 2891 6477 146 86 63 chr2 178878136 178878964 -74377619 + L1MC3 LINE L1 6259 7207 -578 286 236 56 0 chr2 178878964 178879036 -74377547 + MLT1K LTR MaLR 36 111 -456 6477 146 86 63 chr2 178879036 178879619 -74376964 + L1MC3 LINE L1 7207 7775 -10 3392 148 79 18 chr2 178879820 178879925 -74376658 - MER44D DNA MER2_type -1882 705 608 432 0 0 0 chr2 178879925 178879973 -74376610 + (TA)n Simple_repeat Simple_repeat 2 49 0 3392 148 79 18 chr2 178879973 178880527 -74376056 - MER44D DNA MER2_type -1979 608 6 251 287 75 21 chr2 178880601 178880695 -74375888 + MER5B DNA MER1_type 79 177 -1 346 287 87 97 chr2 178880803 178881124 -74375459 - L2 LINE L2 -769 2545 2228 343 258 10 21 chr2 178881994 178882091 -74374492 + MLT1K LTR MaLR 140 235 -353 1552 157 110 39 chr2 178882230 178882594 -74373989 - MLT1B LTR MaLR 0 390 1 284 210 99 0 chr2 178882752 178882833 -74373750 + MLT1L LTR MaLR 525 613 -2 591 156 128 0 chr2 178883100 178883209 -74373374 + FRAM SINE Alu 29 151 -25 2324 96 10 0 chr2 178884161 178884464 -74372119 - AluSp SINE Alu -7 306 1 338 305 136 0 chr2 178884636 178884790 -74371793 + MIR SINE MIR 78 252 -10 181 308 26 51 chr2 178884992 178885070 -74371513 - MIR SINE MIR -167 95 20 23 0 0 0 chr2 178885266 178885289 -74371294 + AT_rich Low_complexity Low_complexity 1 23 0 496 284 74 33 chr2 178885316 178885587 -74370996 - MER76 LTR ERV -34 654 373 954 178 130 17 chr2 178885599 178885830 -74370753 - MER76 LTR ERV -431 257 1 249 313 104 12 chr2 178886366 178886529 -74370054 + MARNA DNA Mariner 15 192 -394 * 366 267 81 19 chr2 178886408 178886569 -74370014 - MARNA DNA Mariner -62 524 354 372 295 15 23 chr2 178886924 178887185 -74369398 + L1MC/D LINE L1 4399 4657 -1489 495 303 57 57 chr2 178887355 178887738 -74368845 + L1MC/D LINE L1 4802 5184 -962 253 255 83 0 chr2 178887776 178887907 -74368676 + L1MC/D LINE L1 5269 5411 -772 1174 252 65 24 chr2 178887917 178888334 -74368249 - MLT1L LTR MaLR -8 607 174 1091 226 10 48 chr2 178888347 178888657 -74367926 + Charlie1a DNA MER1_type 6 303 -1152 3565 158 58 72 chr2 178888684 178889606 -74366977 + Charlie1a DNA MER1_type 547 1455 0 261 303 116 21 chr2 178889715 178889999 -74366584 + L1MC/D LINE L1 5506 5816 -1992 2312 98 3 0 chr2 178890008 178890305 -74366278 + AluSp SINE Alu 1 298 -15 1826 181 0 3 chr2 178890317 178890616 -74365967 + AluJb SINE Alu 1 298 -14 2258 119 31 31 chr2 178890646 178891006 -74365577 + THE1B LTR MaLR 1 360 -4 2346 90 7 0 chr2 178891222 178891522 -74365061 - AluSg1 SINE Alu -7 302 1 27 29 0 0 chr2 178891558 178891592 -74364991 + AT_rich Low_complexity Low_complexity 1 34 0 228 274 215 22 chr2 178892594 178892729 -74363854 - MIR SINE MIR -96 166 6 644 242 109 93 chr2 178893289 178893537 -74363046 - MIR SINE MIR -10 252 1 1496 171 48 20 chr2 178893572 178893824 -74362759 - L1MC3 LINE L1 -1 7784 7518 2383 79 0 0 chr2 178893824 178894115 -74362468 - AluY SINE Alu -20 291 1 1496 171 48 20 chr2 178894115 178894213 -74362370 - L1MC3 LINE L1 -267 7518 7424 282 311 0 0 chr2 178894257 178894347 -74362236 - MLT1L LTR MaLR -443 124 35 4092 155 66 106 chr2 178894347 178894538 -74362045 - L1MC3 LINE L1 -688 7097 6900 1720 148 0 26 chr2 178894538 178894809 -74361774 + AluJb SINE Alu 1 264 -48 4092 155 66 106 chr2 178894809 178894871 -74361712 - L1MC3 LINE L1 -885 6900 6837 268 53 0 0 chr2 178894871 178894909 -74361674 + AluJb SINE Alu 260 297 -5 4092 155 66 106 chr2 178894909 178895782 -74360801 - L1MC3 LINE L1 -948 6837 5979 1098 96 0 0 chr2 178895941 178896076 -74360507 + AluJb SINE Alu 1 135 -177 254 344 62 10 chr2 178896100 178896196 -74360387 - MIR3 SINE MIR -102 106 6 344 294 23 68 chr2 178896336 178896513 -74360070 + L1ME3A LINE L1 2 170 -5949 2427 286 49 38 chr2 178896594 178897166 -74359417 + L1ME3A LINE L1 3803 4367 -1780 938 181 24 0 chr2 178897166 178897332 -74359251 + FAM SINE Alu 1 170 -5 237 108 0 0 chr2 178897333 178897370 -74359213 + (CA)n Simple_repeat Simple_repeat 2 38 0 2427 286 49 38 chr2 178897370 178897503 -74359080 + L1ME3A LINE L1 4367 4497 -1650 1374 189 4 0 chr2 178897503 178897736 -74358847 - MER8 DNA MER2_type -4 235 2 2427 286 49 38 chr2 178897736 178898788 -74357795 + L1ME3A LINE L1 4497 5536 -611 2593 107 13 8 chr2 178898788 178899161 -74357422 + THE1C LTR MaLR 1 375 0 10597 97 34 36 chr2 178899161 178900745 -74355838 + THE1C-int LTR MaLR 1 1580 0 3022 64 0 5 chr2 178900745 178901122 -74355461 + THE1C LTR MaLR 1 375 0 2427 286 49 38 chr2 178901122 178901177 -74355406 + L1ME3A LINE L1 5535 5642 -505 1511 228 156 13 chr2 178901182 178901673 -74354910 + MLT1E1 LTR MaLR 1 654 0 334 251 104 50 chr2 178901687 178901749 -74354834 + L1ME3A LINE L1 5659 5716 -437 2275 121 0 0 chr2 178901749 178902055 -74354528 + AluSg SINE Alu 1 306 -4 334 251 104 50 chr2 178902055 178902251 -74354332 + L1ME3A LINE L1 5716 5931 -222 234 273 385 0 chr2 178902648 178902853 -74353730 + L2 LINE L2 2600 2883 -431 1119 301 106 17 chr2 178903007 178903779 -74352804 + L2 LINE L2 2463 3311 -2 516 188 69 104 chr2 178904235 178904379 -74352204 + FLAM_A SINE Alu 1 139 -3 278 348 209 35 chr2 178904432 178904829 -74351754 - L2 LINE L2 0 3272 2807 2378 89 0 10 chr2 178905630 178905934 -74350649 + AluSq SINE Alu 1 301 -12 2217 118 0 0 chr2 178905948 178906253 -74350330 + AluSx SINE Alu 1 305 -7 1145 96 42 0 chr2 178906254 178906421 -74350162 + L1PA7 LINE L1 5981 6154 0 3150 195 87 73 chr2 178906549 178906949 -74349634 + LTR28 LTR ERV1 1 394 -1361 2980 112 99 0 chr2 178906949 178907405 -74349178 + MER61D LTR ERV1 1 501 0 3150 195 87 73 chr2 178907405 178908096 -74348487 + LTR28 LTR ERV1 394 1735 -20 3464 133 36 10 chr2 178908642 178909230 -74347353 - MER6A DNA MER2_type -2 603 1 309 326 73 56 chr2 178910186 178910474 -74346109 + L1M2 LINE L1 672 964 -5885 29 47 0 0 chr2 178910586 178910629 -74345954 + GC_rich Low_complexity Low_complexity 1 43 0 254 206 15 0 chr2 178911536 178911604 -74344979 - L1MC4 LINE L1 -49 7993 7925 3493 194 60 18 chr2 178911684 178912647 -74343936 - L1MB8 LINE L1 0 6989 5962 2361 84 3 0 chr2 178912647 178912946 -74343637 - AluSp SINE Alu -13 300 1 3493 194 60 18 chr2 178912946 178913371 -74343212 - L1MB8 LINE L1 -1027 5962 5556 * 3933 226 72 10 chr2 178913367 178914613 -74341970 - L1MB8 LINE L1 -2569 4388 3065 1218 169 73 42 chr2 178914631 178914891 -74341692 - AluJo SINE Alu -34 278 11 1346 195 44 36 chr2 178914893 178915483 -74341100 - L1MCa LINE L1 -4830 1734 1075 1902 134 24 20 chr2 178915519 178915817 -74340766 + AluSx SINE Alu 1 299 -13 866 211 0 12 chr2 178915839 178916000 -74340583 - FAM SINE Alu -16 159 1 1133 171 18 94 chr2 178916000 178916166 -74340417 - L1MCa LINE L1 -4965 1080 950 1728 168 7 0 chr2 178916166 178916452 -74340131 + AluJb SINE Alu 1 288 -24 1133 171 18 94 chr2 178916452 178916613 -74339970 - L1MCa LINE L1 -5095 950 778 821 226 46 17 chr2 178916602 178916841 -74339742 - L1MCa LINE L1 -6158 406 161 * 3239 266 33 13 chr2 178916854 178917789 -74338794 - L1MB8 LINE L1 -5902 957 4 2413 86 0 22 chr2 178918149 178918464 -74338119 + AluSg SINE Alu 1 308 -2 1751 188 17 0 chr2 178918471 178918769 -74337814 + AluJb SINE Alu 2 304 -8 258 267 0 0 chr2 178918847 178918907 -74337676 + L1ME4a LINE L1 5526 5585 -536 255 241 56 37 chr2 178919125 178919233 -74337350 + L1ME4a LINE L1 5951 6060 -61 23 0 0 0 chr2 178919875 178919898 -74336685 + AT_rich Low_complexity Low_complexity 1 23 0 229 276 40 26 chr2 178920010 178920162 -74336421 + MER103 DNA DNA 13 166 0 2003 107 120 12 chr2 178920189 178920515 -74336068 + MER46B DNA MER2_type 1 236 0 2156 97 14 3 chr2 178921005 178921295 -74335288 - AluSq SINE Alu -18 295 3 29 47 0 0 chr2 178921523 178921566 -74335017 + AT_rich Low_complexity Low_complexity 1 43 0 2012 156 0 0 chr2 178921566 178921855 -74334728 - AluJb SINE Alu -23 289 1 2435 77 0 0 chr2 178922138 178922435 -74334148 + AluSg SINE Alu 1 297 -13 2219 95 13 10 chr2 178923229 178923534 -74333049 - AluSg SINE Alu -4 306 1 715 217 0 0 chr2 178923541 178923670 -74332913 - FLAM_C SINE Alu 0 133 5 1027 153 0 0 chr2 178924013 178924163 -74332420 - AluJb SINE Alu -21 291 142 29 28 0 0 chr2 178924289 178924325 -74332258 + AT_rich Low_complexity Low_complexity 1 36 0 2033 141 3 0 chr2 178924876 178925180 -74331403 - AluSx SINE Alu -7 305 1 31 58 0 0 chr2 178925640 178925692 -74330891 + AT_rich Low_complexity Low_complexity 1 52 0 2266 107 0 0 chr2 178925942 178926261 -74330322 + L1PB1 LINE L1 5830 6148 -3 24 0 0 0 chr2 178926261 178926285 -74330298 + AT_rich Low_complexity Low_complexity 1 24 0 848 244 52 0 chr2 178926640 178926853 -74329730 - MIR SINE MIR -37 225 2 1769 101 86 4 chr2 178927443 178927725 -74328858 - AluSc SINE Alu 0 303 1 1579 157 0 38 chr2 178928359 178928626 -74327957 - AluJo SINE Alu -45 267 11 907 161 0 13 chr2 178929919 178930068 -74326515 + FRAM SINE Alu 24 170 -6 2380 85 0 0 chr2 178930161 178930456 -74326127 - AluY SINE Alu -16 295 1 1852 149 50 0 chr2 178930487 178930768 -74325815 + AluSx SINE Alu 1 295 -17 7287 150 33 5 chr2 178930847 178932947 -74323636 - L1PA12 LINE L1 0 6168 4058 391 259 43 26 chr2 178934578 178934694 -74321889 + MIR3 SINE MIR 88 205 -3 2255 99 7 13 chr2 178934900 178935203 -74321380 + AluSp SINE Alu 1 301 -12 331 340 20 27 chr2 178935216 178935366 -74321217 + L1MC4a LINE L1 3758 3906 -2240 353 311 142 16 chr2 178935429 178935619 -74320964 + L1MC4a LINE L1 4006 4219 -1927 22 0 0 0 chr2 178935665 178935687 -74320896 + AT_rich Low_complexity Low_complexity 1 22 0 2361 98 0 0 chr2 178935917 178936214 -74320369 + AluSg SINE Alu 3 299 -11 1829 161 0 17 chr2 178936388 178936708 -74319875 - AluJb SINE Alu 0 315 1 254 289 26 0 chr2 178936713 178936828 -74319755 + MIR SINE MIR 92 207 -1 2110 92 65 3 chr2 178937035 178937328 -74319255 + AluSx SINE Alu 1 311 -1 1407 206 27 24 chr2 178937528 178937863 -74318720 - L1ME1 LINE L1 -7 6159 5824 695 286 80 37 chr2 178937979 178938669 -74317914 + L1MC4a LINE L1 5019 5741 -812 293 212 8 114 chr2 178938799 178938824 -74317759 + L1MC4a LINE L1 5809 5835 -1973 2058 130 23 0 chr2 178938824 178939125 -74317458 + AluSx SINE Alu 3 310 -2 293 212 8 114 chr2 178939125 178939231 -74317352 + L1MC4a LINE L1 5835 5926 -1882 435 174 38 8 chr2 178939476 178939584 -74316999 - L1ME1 LINE L1 -319 5802 5694 * 498 263 65 91 chr2 178939577 178940037 -74316546 - L1MC5 LINE L1 -738 7223 6776 1915 192 73 18 chr2 178940085 178940522 -74316061 - MLT1C LTR MaLR -6 461 1 362 252 101 0 chr2 178940523 178940642 -74315941 - L1MC4a LINE L1 -1113 6695 6565 2437 82 0 7 chr2 178940786 178941091 -74315492 + AluSx SINE Alu 1 303 -9 517 320 41 22 chr2 178941228 178941361 -74315222 - L1MC4a LINE L1 -1575 6233 6104 1740 149 34 17 chr2 178941361 178941657 -74314926 - AluSx SINE Alu -11 301 1 517 320 41 22 chr2 178941657 178941889 -74314694 - L1MC4a LINE L1 -1704 6104 5861 906 150 0 0 chr2 178941901 178942034 -74314549 - AluJo SINE Alu -177 135 3 446 315 50 15 chr2 178942292 178942492 -74314091 - L1MC4 LINE L1 -1071 6971 6765 244 179 90 13 chr2 178942813 178942891 -74313692 - L1ME1 LINE L1 -904 5338 5255 1185 116 50 5 chr2 178942997 178943195 -74313388 + Tigger2 DNA MER2_type 2 208 -2510 1061 120 0 32 chr2 178943192 178943281 -74313302 + Tigger2 DNA MER2_type 2564 2647 -71 * 1883 110 12 118 chr2 178943281 178943627 -74312956 + AluSx SINE Alu 1 309 -3 1061 120 0 32 chr2 178943627 178943695 -74312888 + Tigger2 DNA MER2_type 2647 2716 -2 198 306 165 25 chr2 178944321 178944442 -74312141 + MIR SINE MIR 125 262 0 294 228 259 25 chr2 178945477 178945639 -74310944 - L2 LINE L2 -6 3307 3108 851 185 0 0 chr2 178945686 178945821 -74310762 - AluJb SINE Alu -20 292 158 1530 159 4 0 chr2 178945890 178946142 -74310441 - AluJo SINE Alu -6 306 54 583 153 12 0 chr2 178946696 178946781 -74309802 - MER2 DNA MER2_type 0 345 260 * 734 173 0 58 chr2 178946779 178946918 -74309665 - MER2 DNA MER2_type -213 132 2 2062 148 0 0 chr2 178947605 178947910 -74308673 + AluJb SINE Alu 1 305 -7 2212 116 3 0 chr2 178948049 178948351 -74308232 - AluSx SINE Alu -9 303 1 230 103 0 0 chr2 178948492 178948521 -74308062 - Alu SINE Alu -49 117 89 351 356 62 7 chr2 178948526 178948672 -74307911 + L2 LINE L2 3111 3264 -8 816 164 0 22 chr2 178949195 178949329 -74307254 + FLAM_C SINE Alu 1 131 -2 286 321 221 0 chr2 178949348 178949479 -74307104 + MIR SINE MIR 91 250 -12 627 280 225 36 chr2 178950255 178950956 -74305627 + L2 LINE L2 1973 2806 -508 619 319 88 21 chr2 178951007 178951346 -74305237 + L2 LINE L2 2946 3307 -6 1776 169 10 7 chr2 178951356 178951657 -74304926 + AluJo SINE Alu 1 302 -10 1687 136 7 78 chr2 178953384 178953692 -74302891 + AluJb SINE Alu 1 286 -26 261 57 0 0 chr2 178954197 178954232 -74302351 + (TTTTG)n Simple_repeat Simple_repeat 4 38 0 414 333 56 33 chr2 178956470 178956650 -74299933 - MIR3 SINE MIR -10 198 15 453 205 19 83 chr2 178958773 178958929 -74297654 - MER102b DNA MER1_type -15 326 181 678 234 35 35 chr2 178959530 178959731 -74296852 - MIR SINE MIR -3 259 59 2924 214 31 19 chr2 178960472 178961173 -74295410 - L1ME2 LINE L1 -20 6144 5435 258 265 76 53 chr2 178961256 178961388 -74295195 - L1MC4a LINE L1 -943 6842 6680 2460 206 70 54 chr2 178962160 178962192 -74294391 - L1ME1 LINE L1 -6 6160 6130 1785 123 16 0 chr2 178962192 178962443 -74294140 - AluSx SINE Alu -22 290 36 2460 206 70 54 chr2 178962443 178963291 -74293292 - L1ME1 LINE L1 -36 6130 5339 2017 125 4 0 chr2 178963296 178963576 -74293007 - AluSx SINE Alu -12 300 20 711 136 0 0 chr2 178963629 178963732 -74292851 - FLAM_C SINE Alu -40 103 1 672 227 0 0 chr2 178964704 178964836 -74291747 + MER94 DNA DNA 3 134 0 2495 72 0 0 chr2 178965518 178965823 -74290760 - AluY SINE Alu -6 305 1 408 261 70 14 chr2 178965890 178966032 -74290551 - MER102b DNA MER1_type -154 187 38 21 0 0 0 chr2 178966123 178966144 -74290439 + AT_rich Low_complexity Low_complexity 1 21 0 322 346 31 40 chr2 178966286 178966514 -74290069 - LTR16C LTR ERVL 0 491 266 2236 106 27 0 chr2 178966919 178967220 -74289363 + AluSg SINE Alu 1 309 -1 1906 95 8 4 chr2 178968104 178968356 -74288227 + AluSg SINE Alu 46 298 -12 2046 104 4 11 chr2 178968360 178968639 -74287944 + AluSg SINE Alu 5 281 -29 322 160 0 27 chr2 178968644 178968719 -74287864 - L1MB7 LINE L1 0 6184 6112 4825 143 38 30 chr2 178969061 178969498 -74287085 - L1MB7 LINE L1 -54 6130 5698 773 184 0 0 chr2 178969498 178969623 -74286960 + FLAM_C SINE Alu 1 125 -8 4825 143 38 30 chr2 178969623 178970295 -74286288 - L1MB7 LINE L1 -486 5698 5009 201 74 0 0 chr2 178971090 178971117 -74285466 + (A)n Simple_repeat Simple_repeat 1 27 0 1994 107 21 7 chr2 178971835 178972143 -74284440 + AluSx SINE Alu 1 312 0 484 15 31 0 chr2 178972246 178972311 -74284272 + (CA)n Simple_repeat Simple_repeat 2 68 0 2839 124 19 0 chr2 178972404 178972815 -74283768 - MSTB LTR MaLR -7 419 1 955 261 129 25 chr2 178972827 178972932 -74283651 - L1MB7 LINE L1 -1118 5028 4935 900 150 0 0 chr2 178972932 178973065 -74283518 + FLAM_C SINE Alu 1 133 0 955 261 129 25 chr2 178973065 178973477 -74283106 - L1MB7 LINE L1 -1211 4935 4457 754 209 68 34 chr2 178973490 178973696 -74282887 - LTR7 LTR ERV1 0 450 238 2454 74 0 3 chr2 178973920 178974217 -74282366 - AluY SINE Alu -15 296 1 688 95 0 11 chr2 178974226 178974321 -74282262 - LTR7 LTR ERV1 -356 94 1 259 224 47 19 chr2 178974336 178974443 -74282140 - L1MB7 LINE L1 -1712 4434 4325 2374 77 3 7 chr2 178974595 178974892 -74281691 + AluSg SINE Alu 1 296 -14 21 0 0 0 chr2 178974934 178974955 -74281628 + AT_rich Low_complexity Low_complexity 1 21 0 705 77 51 43 chr2 178975468 178975585 -74280998 + MSTB1 LTR MaLR 315 432 0 1642 148 37 78 chr2 178975585 178975913 -74280670 - MLT1B LTR MaLR -1 466 132 2153 97 59 0 chr2 178975913 178976203 -74280380 - AluSx SINE Alu -5 307 1 1642 148 37 78 chr2 178976203 178976330 -74280253 - MLT1B LTR MaLR -335 132 1 458 300 77 27 chr2 178976440 178976611 -74279972 + L1MCc LINE L1 1171 1332 -5426 1954 161 3 7 chr2 178976611 178976921 -74279662 + AluJb SINE Alu 3 311 -1 458 300 77 27 chr2 178976921 178977258 -74279325 + L1MCc LINE L1 1332 1866 -4892 364 186 0 160 chr2 178977275 178977431 -74279152 - L1M LINE L1 -778 5386 5256 1923 152 0 7 chr2 178977547 178977830 -74278753 + AluJo SINE Alu 1 281 -31 201 74 0 0 chr2 178977831 178977858 -74278725 + (CAAT)n Simple_repeat Simple_repeat 2 28 0 5885 185 40 62 chr2 178977868 178978946 -74277637 - L1MB7 LINE L1 -19 6165 5065 1865 173 0 10 chr2 178978946 178979259 -74277324 - AluJb SINE Alu -2 310 1 5885 185 40 62 chr2 178979259 178979393 -74277190 - L1MB7 LINE L1 -1119 5065 4930 2059 153 10 81 chr2 178979393 178979786 -74276797 - MLT1A1 LTR MaLR 0 365 1 5885 185 40 62 chr2 178979786 178980291 -74276292 - L1MB7 LINE L1 -1254 4930 4416 2628 142 71 0 chr2 178980291 178980713 -74275870 + LTR47A LTR ERVL 1 452 0 5885 185 40 62 chr2 178980713 178980830 -74275753 - L1MB7 LINE L1 -1768 4416 4298 2300 111 0 3 chr2 178980830 178981136 -74275447 + AluSx SINE Alu 1 305 -7 5885 185 40 62 chr2 178981136 178981716 -74274867 - L1MB7 LINE L1 -1886 4298 3807 881 194 52 73 chr2 178981694 178981757 -74274826 - L1M4 LINE L1 -900 5246 5183 * 1863 171 3 3 chr2 178981757 178982066 -74274517 - AluJb SINE Alu -1 311 3 881 194 52 73 chr2 178982066 178982290 -74274293 - L1M4 LINE L1 -963 5183 4965 248 226 94 69 chr2 178982357 178982516 -74274067 + L1ME3 LINE L1 5919 6081 -81 244 216 14 0 chr2 178982578 178982652 -74273931 + L1ME LINE L1 5112 5186 -960 283 339 83 31 chr2 178982791 178982961 -74273622 - L1MEd LINE L1 -5357 762 579 552 45 0 112 chr2 178982961 178983019 -74273564 + MADE1 DNA Mariner 2 48 -32 2085 122 26 3 chr2 178983019 178983322 -74273261 - AluSx SINE Alu -2 310 1 552 45 0 112 chr2 178983322 178983352 -74273231 + MADE1 DNA Mariner 48 80 0 283 339 83 31 chr2 178983352 178983373 -74273210 - L1MEd LINE L1 -5540 579 561 618 283 139 0 chr2 178983638 178983861 -74272722 - L1MC4a LINE L1 -1934 5874 5621 297 262 0 0 chr2 178985209 178985270 -74271313 + MER91 DNA MER1_type 4 64 -76 604 212 25 50 chr2 178985743 178985796 -74270787 + L1ME LINE L1 5616 5669 -452 1522 275 49 66 chr2 178985796 178986464 -74270119 - MLT2F LTR ERVL -2 661 5 604 212 25 50 chr2 178986464 178986608 -74269975 + L1ME LINE L1 5669 5808 -313 1975 141 7 3 chr2 178986618 178986908 -74269675 + AluSx SINE Alu 1 291 -21 31 0 0 0 chr2 178986908 178986939 -74269644 + AT_rich Low_complexity Low_complexity 1 31 0 1833 206 39 53 chr2 178987034 178987545 -74269038 + MLT1D LTR MaLR 1 504 -1 1126 196 80 0 chr2 178988267 178988517 -74268066 - Charlie4 DNA MER1_type -1686 275 6 2372 84 0 10 chr2 178989103 178989400 -74267183 + AluSc SINE Alu 1 294 -15 705 229 39 17 chr2 178989648 178989827 -74266756 + MER74A LTR ERVL 9 191 -367 622 276 86 47 chr2 178989834 178990113 -74266470 + MER74B LTR ERVL 333 622 0 1949 160 0 3 chr2 178990498 178990792 -74265791 + AluJo SINE Alu 6 298 -14 581 140 0 20 chr2 178990897 178990997 -74265586 + MER4A LTR ERV1 1 98 -566 1880 123 222 18 chr2 178990997 178991331 -74265252 + MER4A LTR ERV1 263 664 0 2114 101 35 3 chr2 178992039 178992326 -74264257 - AluSq SINE Alu -17 296 1 1312 281 69 2 chr2 178992521 178992998 -74263585 - LTR33 LTR ERVL -12 509 1 2675 52 0 0 chr2 178993837 178994147 -74262436 - AluY SINE Alu -1 310 1 260 301 81 0 chr2 178994204 178994327 -74262256 - L3 LINE CR1 -69 1508 1376 1891 143 21 0 chr2 178994330 178994617 -74261966 + AluJb SINE Alu 1 293 -19 21 0 0 0 chr2 178994617 178994638 -74261945 + AT_rich Low_complexity Low_complexity 1 21 0 703 245 143 33 chr2 178995110 178995541 -74261042 + LTR33 LTR ERVL 7 521 0 551 194 134 0 chr2 178996510 178996644 -74259939 - FRAM SINE Alu -15 161 10 1914 146 58 0 chr2 178996669 178996964 -74259619 - AluJb SINE Alu 0 312 1 4994 135 70 33 chr2 178996969 178997859 -74258724 - MER49 LTR ERV1 0 923 1 207 108 54 0 chr2 179000487 179000524 -74256059 - MIR SINE MIR -132 130 92 2307 109 0 0 chr2 179000808 179001110 -74255473 - AluSx SINE Alu -10 302 1 1138 75 0 7 chr2 179001702 179001848 -74254735 + AluSp/q SINE Alu 166 310 -3 2281 106 0 0 chr2 179001857 179002149 -74254434 + AluSx SINE Alu 1 292 -20 296 225 31 8 chr2 179002199 179002328 -74254255 + CT-rich Low_complexity Low_complexity 1 132 0 348 213 32 64 chr2 179003190 179003284 -74253299 + L2 LINE L2 3223 3313 0 2619 238 59 62 chr2 179003553 179003636 -74252947 + L2 LINE L2 1603 1685 -1629 240 35 0 0 chr2 179003636 179003665 -74252918 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2619 238 59 62 chr2 179003665 179003953 -74252630 + L2 LINE L2 1685 1972 -1342 2322 105 3 0 chr2 179003953 179004257 -74252326 - AluSp SINE Alu -8 305 1 2619 238 59 62 chr2 179004257 179004839 -74251744 + L2 LINE L2 1972 2554 -760 505 264 64 7 chr2 179004842 179004982 -74251601 + L2 LINE L2 3165 3312 -1 2524 75 3 0 chr2 179005123 179005428 -74251155 + AluSp SINE Alu 2 307 -6 1643 209 64 46 chr2 179005721 179006175 -74250408 + MLT1C LTR MaLR 6 467 0 484 305 65 38 chr2 179006409 179006671 -74249912 - Charlie8 DNA MER1_type -2140 277 9 1833 110 92 14 chr2 179006767 179007049 -74249534 + AluJb SINE Alu 1 304 -8 250 306 28 0 chr2 179007192 179007264 -74249319 - L2 LINE L2 0 3313 3240 847 207 24 0 chr2 179007312 179007476 -74249107 - AluJb SINE Alu -4 308 141 2057 151 0 3 chr2 179008390 179008695 -74247888 + AluJb SINE Alu 1 304 -8 518 111 162 0 chr2 179008695 179008748 -74247835 + L1MA8 LINE L1 6165 6208 -83 339 25 0 0 chr2 179008748 179008788 -74247795 + (TG)n Simple_repeat Simple_repeat 1 40 0 518 111 162 0 chr2 179008788 179008833 -74247750 + L1MA8 LINE L1 6208 6279 -12 28 0 0 0 chr2 179008838 179008866 -74247717 + AT_rich Low_complexity Low_complexity 1 28 0 2241 106 0 3 chr2 179008957 179009258 -74247325 + AluSx SINE Alu 1 300 -12 389 275 22 0 chr2 179009259 179009350 -74247233 - L2 LINE L2 -17 3296 3204 435 108 0 27 chr2 179009631 179009705 -74246878 - AluSx SINE Alu -1 310 239 1133 147 0 6 chr2 179009708 179009878 -74246705 - AluSx SINE Alu -143 169 1 1007 170 0 0 chr2 179010764 179010917 -74245666 + AluSg/x SINE Alu 134 286 -26 1880 173 0 3 chr2 179011512 179011812 -74244771 - AluJb SINE Alu -13 299 1 314 287 96 34 chr2 179011831 179012006 -74244577 - L1ME3A LINE L1 -5 6165 5974 2025 139 10 16 chr2 179012006 179012179 -74244404 - AluSx SINE Alu -11 301 129 2231 104 0 13 chr2 179012179 179012478 -74244105 - AluSx SINE Alu -17 295 1 2025 139 10 16 chr2 179012478 179012607 -74243976 - AluSx SINE Alu -183 129 1 314 287 96 34 chr2 179012607 179012640 -74243943 - L1ME3A LINE L1 -196 5974 5944 484 209 108 7 chr2 179012875 179013014 -74243569 + MIR SINE MIR 93 245 -17 297 89 0 0 chr2 179013014 179013059 -74243524 + (TG)n Simple_repeat Simple_repeat 2 46 0 23 33 0 0 chr2 179013433 179013463 -74243120 + AT_rich Low_complexity Low_complexity 1 30 0 995 144 60 0 chr2 179013463 179013630 -74242953 + L1MD2 LINE L1 6173 6349 -10 1457 96 22 17 chr2 179013632 179013862 -74242721 + L1MA5A LINE L1 6061 6291 -6 2060 107 50 4 chr2 179013867 179014148 -74242435 + AluSq SINE Alu 1 294 -19 264 230 20 50 chr2 179014155 179014255 -74242328 - L2 LINE L2 -8 3264 3168 224 354 38 13 chr2 179014460 179014618 -74241965 + L3b LINE CR1 1353 1514 -69 2119 103 0 65 chr2 179014670 179014991 -74241592 - AluSx SINE Alu -12 300 1 23 0 0 0 chr2 179014996 179015019 -74241564 + AT_rich Low_complexity Low_complexity 1 23 0 1741 169 0 0 chr2 179015074 179015347 -74241236 + AluJb SINE Alu 1 273 -39 269 175 0 0 chr2 179015529 179015569 -74241014 + MER94 DNA DNA 1 40 -94 2424 100 0 6 chr2 179015592 179015903 -74240680 - AluSx SINE Alu -3 309 1 1917 253 85 13 chr2 179015960 179016585 -74239998 - L1ME3A LINE L1 -88 6082 5413 2201 82 31 7 chr2 179016645 179016936 -74239647 - AluSx SINE Alu -14 298 1 704 249 68 66 chr2 179016989 179017399 -74239184 - L2 LINE L2 -946 2368 1958 2337 110 3 0 chr2 179017725 179018034 -74238549 - AluSx SINE Alu 0 312 3 743 191 15 0 chr2 179018240 179018371 -74238212 + FLAM_C SINE Alu 1 133 0 223 154 0 0 chr2 179018372 179018411 -74238172 + GA-rich Low_complexity Low_complexity 2 40 0 1500 213 0 23 chr2 179018465 179018775 -74237808 + AluJb SINE Alu 1 303 -9 1693 218 32 21 chr2 179018949 179019384 -74237199 - MLT1E2 LTR MaLR -3 623 184 204 242 30 20 chr2 179019470 179019569 -74237014 + (TTAA)n Simple_repeat Simple_repeat 3 102 0 366 306 128 30 chr2 179019675 179020376 -74236207 - L1MC/D LINE L1 -558 5604 5010 400 280 24 0 chr2 179020428 179020553 -74236030 - L1MC/D LINE L1 -1116 5030 4903 2021 155 0 0 chr2 179020729 179021033 -74235550 + AluJb SINE Alu 1 304 -8 295 219 0 123 chr2 179021188 179021250 -74235333 - L1MC/D LINE L1 -2196 3950 3882 2150 113 0 32 chr2 179021250 179021561 -74235022 - AluSx SINE Alu -11 301 1 1220 142 19 5 chr2 179021569 179021781 -74234802 - L1MA4 LINE L1 0 6300 6086 295 219 0 123 chr2 179021781 179021823 -74234760 - L1MC/D LINE L1 -2271 3875 3851 382 315 85 21 chr2 179022034 179022269 -74234314 + MIR SINE MIR 12 261 -1 338 298 176 73 chr2 179022397 179022766 -74233817 - L2 LINE L2 0 3272 2866 212 325 137 40 chr2 179022770 179023047 -74233536 - L2 LINE L2 -639 2675 2372 631 324 136 54 chr2 179023048 179023904 -74232679 - L2 LINE L2 -1339 1975 1050 180 0 0 0 chr2 179023979 179023999 -74232584 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 799 220 31 0 chr2 179024075 179024234 -74232349 + MER5A DNA MER1_type 15 178 -11 208 314 128 0 chr2 179024311 179024413 -74232170 + L2 LINE L2 3156 3270 -2 198 279 51 13 chr2 179024439 179024518 -74232065 - L3b LINE CR1 -278 1305 1224 189 0 0 0 chr2 179024518 179024539 -74232044 + (A)n Simple_repeat Simple_repeat 1 21 0 246 105 0 0 chr2 179024643 179024681 -74231902 + (GAAAA)n Simple_repeat Simple_repeat 2 39 0 821 165 0 0 chr2 179024700 179024833 -74231750 + FLAM_C SINE Alu 6 138 -5 1949 163 0 0 chr2 179024956 179025256 -74231327 - AluSx SINE Alu -12 300 1 306 174 29 14 chr2 179025292 179025361 -74231222 - L1ME4a LINE L1 -5 6116 6047 417 167 0 0 chr2 179025366 179025432 -74231151 + MER66A LTR ERV1 287 352 -126 315 235 68 31 chr2 179025439 179025601 -74230982 - L1ME4a LINE L1 -59 6062 5895 353 282 28 42 chr2 179025843 179025974 -74230609 + MER5B DNA MER1_type 1 131 -47 1895 138 21 0 chr2 179025974 179026256 -74230327 - AluSx SINE Alu -2 310 23 33 43 0 0 chr2 179026401 179026448 -74230135 + AT_rich Low_complexity Low_complexity 1 47 0 2008 145 26 0 chr2 179026817 179027121 -74229462 - AluJb SINE Alu 0 312 1 473 213 142 0 chr2 179027392 179027533 -74229050 - L1M4 LINE L1 -1462 4684 4524 261 265 122 28 chr2 179027663 179027893 -74228690 - L1M4 LINE L1 -1797 4349 4089 305 228 67 72 chr2 179027913 179028051 -74228532 + MLT1J2 LTR MaLR 302 395 -14 333 291 52 0 chr2 179028076 179028210 -74228373 - L1M4 LINE L1 -2168 3978 3838 333 291 108 5 chr2 179028799 179029012 -74227571 + L1ME4a LINE L1 5675 5909 -212 21 0 0 0 chr2 179029148 179029169 -74227414 + AT_rich Low_complexity Low_complexity 1 21 0 39 38 0 0 chr2 179029445 179029498 -74227085 + AT_rich Low_complexity Low_complexity 1 53 0 1966 134 17 0 chr2 179029704 179030167 -74226416 - MER51A LTR ERV1 0 634 1 27 62 0 0 chr2 179030186 179030234 -74226349 + AT_rich Low_complexity Low_complexity 1 48 0 181 263 18 70 chr2 179030946 179031003 -74225580 + L2 LINE L2 3247 3300 -13 956 279 12 8 chr2 179031538 179031778 -74224805 - MIR SINE MIR -21 241 1 21 57 0 0 chr2 179034156 179034191 -74222392 + AT_rich Low_complexity Low_complexity 1 35 0 329 96 45 45 chr2 179034191 179034369 -74222214 + (TA)n Simple_repeat Simple_repeat 1 178 0 31 0 0 0 chr2 179034369 179034400 -74222183 + AT_rich Low_complexity Low_complexity 1 31 0 1389 179 132 26 chr2 179034406 179034747 -74221836 - LTR8A LTR ERV1 -64 663 287 730 169 96 11 chr2 179034783 179034960 -74221623 - MER66B LTR ERV1 0 486 295 1464 206 13 13 chr2 179034960 179035261 -74221322 - MER4D LTR ERV1 -22 881 581 1955 165 3 16 chr2 179035262 179035578 -74221005 + AluJb SINE Alu 1 312 0 2655 62 0 0 chr2 179035909 179036233 -74220350 - LTR17 LTR ERV1 -456 324 1 2531 34 0 0 chr2 179036233 179036525 -74220058 - HERV17 LTR ERV1 0 8626 8335 294 77 0 0 chr2 179036515 179036554 -74220029 - HERV17 LTR ERV1 -1078 7548 7510 * 11419 48 56 13 chr2 179036547 179037980 -74218603 - HERV17 LTR ERV1 -2607 6019 4525 887 92 17 0 chr2 179037980 179038099 -74218484 + LTR10C LTR ERV1 471 591 0 229 243 103 28 chr2 179038499 179038606 -74217977 - MER89 LTR ERV1 -43 516 402 282 115 0 0 chr2 179039497 179039549 -74217034 + (TC)n Simple_repeat Simple_repeat 1 52 0 391 228 157 48 chr2 179039653 179039888 -74216695 + L1ME4a LINE L1 5730 6018 -103 1952 105 25 28 chr2 179039888 179040200 -74216383 + AluSx SINE Alu 1 311 0 391 228 157 48 chr2 179040200 179040314 -74216269 + L1ME4a LINE L1 6018 6118 -3 235 300 9 73 chr2 179040583 179040693 -74215890 + MIR3 SINE MIR 12 114 -94 1936 156 0 25 chr2 179040990 179041310 -74215273 + AluSx SINE Alu 1 312 0 261 296 102 11 chr2 179042569 179042657 -74213926 + MIR SINE MIR 59 154 -108 730 246 69 78 chr2 179042666 179042794 -74213789 + MLT1G1 LTR MaLR 3 131 -464 1654 166 46 3 chr2 179042794 179043077 -74213506 + AluJo SINE Alu 6 300 -12 730 246 69 78 chr2 179043077 179043134 -74213449 + MLT1G1 LTR MaLR 131 187 -408 288 0 0 0 chr2 179043134 179043166 -74213417 + (TC)n Simple_repeat Simple_repeat 1 32 0 730 246 69 78 chr2 179043166 179043232 -74213351 + MLT1G1 LTR MaLR 187 252 -343 2271 117 31 60 chr2 179043232 179043618 -74212965 - THE1C LTR MaLR 0 375 1 730 246 69 78 chr2 179043618 179043806 -74212777 + MLT1G1 LTR MaLR 252 503 -92 763 118 0 0 chr2 179043806 179043908 -74212675 - AluSg/x SINE Alu -11 298 197 422 317 40 22 chr2 179043966 179044190 -74212393 - MLT1-int LTR MaLR -793 578 351 578 135 9 108 chr2 179044356 179044452 -74212131 - MLT1G1 LTR MaLR 0 595 470 2074 133 17 0 chr2 179044452 179044753 -74211830 + AluSx SINE Alu 1 306 -6 578 135 9 108 chr2 179044753 179044767 -74211816 - MLT1G1 LTR MaLR -125 470 456 202 135 27 0 chr2 179044876 179044913 -74211670 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 2266 102 3 10 chr2 179045193 179045506 -74211077 - AluSp SINE Alu -2 311 1 989 241 158 45 chr2 179046028 179046536 -74210047 + MLT1G LTR MaLR 1 552 -3 1530 203 45 0 chr2 179046576 179046866 -74209717 + AluJo SINE Alu 1 303 -9 363 252 68 19 chr2 179046926 179047029 -74209554 + MIR SINE MIR 50 157 -51 312 80 0 20 chr2 179047041 179047091 -74209492 - L1MA9 LINE L1 0 6312 6264 1020 202 0 0 chr2 179047121 179047299 -74209284 - FRAM SINE Alu -1 175 1 1051 138 16 16 chr2 179047299 179047487 -74209096 - L1MA9 LINE L1 -37 6275 6088 1407 178 24 35 chr2 179047489 179047776 -74208807 - MER61A LTR ERV1 -1 342 59 1105 150 6 0 chr2 179047882 179048055 -74208528 - LTR47B LTR ERVL 0 443 270 484 258 8 16 chr2 179048109 179048237 -74208346 - LTR47B LTR ERVL -316 127 1 23 0 0 0 chr2 179048381 179048404 -74208179 + AT_rich Low_complexity Low_complexity 1 23 0 1306 200 125 23 chr2 179048780 179049125 -74207458 + MLT1C LTR MaLR 86 465 -2 760 150 27 7 chr2 179050404 179050551 -74206032 + L1MC1 LINE L1 5940 6089 -244 222 37 0 0 chr2 179050691 179050718 -74205865 + (TG)n Simple_repeat Simple_repeat 2 28 0 628 133 39 39 chr2 179050743 179050871 -74205712 + AluSg/x SINE Alu 181 308 -1 1929 94 29 23 chr2 179050871 179051178 -74205405 - L1MA8 LINE L1 -184 6107 5799 2011 108 0 72 chr2 179051204 179051538 -74205045 + AluSx SINE Alu 3 312 0 325 204 129 21 chr2 179051547 179051640 -74204943 - L1ME4a LINE L1 -22 6099 5997 1736 197 0 9 chr2 179051829 179052144 -74204439 - AluJb SINE Alu 0 312 1 360 324 42 28 chr2 179052504 179052646 -74203937 - MIR SINE MIR -53 209 66 323 157 71 0 chr2 179052749 179052819 -74203764 + L1MD3 LINE L1 7917 7991 -4 851 154 8 8 chr2 179052939 179053069 -74203514 + FLAM_A SINE Alu 1 130 -3 2379 99 0 6 chr2 179053898 179054210 -74202373 + AluSg SINE Alu 1 310 0 1182 270 72 24 chr2 179054674 179055093 -74201490 + L1 LINE L1 11 449 -6400 362 328 95 48 chr2 179055122 179055311 -74201272 + L1 LINE L1 590 787 -6062 2433 148 23 52 chr2 179055378 179055746 -74200837 + MSTB LTR MaLR 1 355 -71 2216 131 0 0 chr2 179055746 179056052 -74200531 - AluSx SINE Alu -6 306 1 2433 148 23 52 chr2 179056052 179056122 -74200461 + MSTB LTR MaLR 355 426 0 2301 255 42 7 chr2 179056708 179057276 -74199307 + L1 LINE L1 1070 1657 -5192 4045 176 29 31 chr2 179057281 179057589 -74198994 + L1 LINE L1 5145 5452 -1396 2368 86 0 3 chr2 179057589 179057892 -74198691 + AluSc SINE Alu 1 302 -7 4045 176 29 31 chr2 179057892 179058471 -74198112 + L1 LINE L1 5452 6030 -818 2126 133 3 16 chr2 179058471 179058787 -74197796 + AluSx SINE Alu 1 312 0 1178 150 93 0 chr2 179058797 179058990 -74197593 + AluJb SINE Alu 86 296 -16 2352 87 3 0 chr2 179059256 179059555 -74197028 - AluSg SINE Alu -10 300 1 1684 174 0 50 chr2 179059583 179059695 -74196888 + AluSx SINE Alu 1 117 -195 2451 77 0 0 chr2 179059695 179059994 -74196589 - AluY SINE Alu -12 299 1 1684 174 0 50 chr2 179059994 179060203 -74196380 + AluSx SINE Alu 117 306 -6 835 284 81 22 chr2 179060245 179060690 -74195893 + L1MC4 LINE L1 7024 7495 -547 1321 175 16 40 chr2 179060693 179060979 -74195604 - AluJb SINE Alu 0 317 38 226 214 0 0 chr2 179061011 179061053 -74195530 - AluJb SINE Alu -258 44 3 340 273 100 33 chr2 179061069 179061219 -74195364 + L1MC5 LINE L1 7323 7482 -479 1714 160 0 72 chr2 179061264 179061602 -74194981 + AluJb SINE Alu 5 312 0 915 290 68 46 chr2 179061695 179062117 -74194466 + L1ME3A LINE L1 4684 5095 -1075 1236 199 44 0 chr2 179062117 179062343 -74194240 - MER46A DNA MER2_type 0 236 1 915 290 68 46 chr2 179062343 179063062 -74193521 + L1ME3A LINE L1 5095 5851 -319 2238 113 0 3 chr2 179063183 179063494 -74193089 + AluSg SINE Alu 1 310 0 1169 152 59 5 chr2 179063627 179063910 -74192673 + MSTB LTR MaLR 1 371 -55 2306 85 7 0 chr2 179063910 179064205 -74192378 - AluSp SINE Alu -16 297 1 1169 152 59 5 chr2 179064205 179064265 -74192318 + MSTB LTR MaLR 371 426 0 1890 110 30 0 chr2 179064285 179064549 -74192034 + AluSg SINE Alu 33 304 -6 1058 111 130 96 chr2 179065101 179065371 -74191212 + L1MC1 LINE L1 6055 6333 0 191 121 0 0 chr2 179065824 179065857 -74190726 + L2 LINE L2 3279 3311 -2 1837 223 22 71 chr2 179065926 179066472 -74190111 + MER21B LTR ERV1 1 519 -344 3096 115 73 13 chr2 179066472 179066572 -74190011 - MER84 LTR ERV1 0 507 415 2361 84 3 10 chr2 179066572 179066880 -74189703 + AluSp SINE Alu 1 306 -7 3096 115 73 13 chr2 179066880 179067256 -74189327 - MER84 LTR ERV1 -92 415 2 355 169 42 14 chr2 179067256 179067327 -74189256 - MER84 LTR ERVI -433 74 2 787 249 59 52 chr2 179067328 179067617 -74188966 + MER21B LTR ERV1 515 805 -58 2547 62 3 0 chr2 179067669 179067976 -74188607 - AluSp SINE Alu -4 309 2 840 133 0 0 chr2 179068290 179068418 -74188165 - MER41A LTR ERV1 0 554 427 694 126 118 8 chr2 179068419 179068538 -74188045 + FLAM_C SINE Alu 2 133 0 3454 115 6 28 chr2 179068543 179069083 -74187500 - MER41B LTR ERV1 -107 528 1 2095 113 3 7 chr2 179069285 179069576 -74187007 - AluSx SINE Alu -22 290 1 1830 148 3 49 chr2 179069747 179070072 -74186511 - AluJb SINE Alu -2 310 1 507 226 152 12 chr2 179070267 179070431 -74186152 - MER5A DNA MER1_type 0 189 3 6348 78 26 44 chr2 179070956 179072126 -74184457 - L1PA14 LINE L1 0 6161 4972 222 37 0 0 chr2 179072126 179072153 -74184430 + (TG)n Simple_repeat Simple_repeat 2 28 0 2164 107 37 3 chr2 179072153 179072451 -74184132 - AluSx SINE Alu -4 308 1 6348 78 26 44 chr2 179072451 179072498 -74184085 - L1PA14 LINE L1 -1187 4974 4959 1011 114 69 0 chr2 179072518 179072693 -74183890 - L1MA8 LINE L1 -6 6285 6099 2341 105 0 6 chr2 179072693 179073006 -74183577 + AluSx SINE Alu 1 311 -1 28 0 0 0 chr2 179073245 179073273 -74183310 + AT_rich Low_complexity Low_complexity 1 28 0 3292 100 13 78 chr2 179073474 179073931 -74182652 + L1PB4 LINE L1 5281 5690 -473 2456 147 65 0 chr2 179073931 179074333 -74182250 + MSTA LTR MaLR 1 428 0 3292 100 13 78 chr2 179074333 179074488 -74182095 + L1PB4 LINE L1 5690 5854 -309 2086 149 3 0 chr2 179074508 179074843 -74181740 + L1PB4 LINE L1 5817 6152 -4 481 208 39 73 chr2 179075462 179075640 -74180943 + MLT1J2 LTR MaLR 65 236 -214 1069 202 27 27 chr2 179075655 179075878 -74180705 - MER58A DNA MER1_type -1 223 1 360 276 103 9 chr2 179075879 179075995 -74180588 + MIR3 SINE MIR 81 207 -1 4760 17 6 0 chr2 179076108 179076645 -74179938 + L1PA3 LINE L1 5616 6155 0 801 120 0 0 chr2 179077475 179077600 -74178983 - MER53 DNA DNA -56 133 9 575 244 94 22 chr2 179077769 179077949 -74178634 + MLT1K LTR MaLR 394 586 -2 1760 197 0 0 chr2 179077973 179078278 -74178305 - AluJo SINE Alu -7 305 1 1652 194 0 26 chr2 179078445 179078749 -74177834 - AluJo SINE Alu -14 298 3 1521 106 17 4 chr2 179078897 179079132 -74177451 - LTR23 LTR ERV1 0 437 200 1007 97 0 15 chr2 179079298 179079432 -74177151 + FLAM_C SINE Alu 1 132 -11 910 270 113 48 chr2 179079698 179080213 -74176370 - LTR1B LTR ERV1 -237 589 42 1711 186 26 22 chr2 179080888 179081199 -74175384 + AluJb SINE Alu 1 312 0 274 103 0 0 chr2 179081330 179081369 -74175214 - LTR49-int LTR ERV1 -2491 2632 2594 2083 102 0 0 chr2 179081382 179081647 -74174936 + AluSx SINE Alu 32 296 -16 3273 162 21 5 chr2 179081647 179082210 -74174373 - MER50 LTR ERV1 -162 572 1 729 179 46 122 chr2 179082217 179082480 -74174103 - LTR49-int LTR ERV1 -3788 1335 1093 470 121 0 0 chr2 179082526 179082592 -74173991 - MER34C LTR ERV1 -360 225 160 4176 206 69 61 chr2 179082594 179083341 -74173242 - LTR49-int LTR ERV1 -3673 2658 1919 1616 118 0 0 chr2 179083341 179083553 -74173030 - AluSg/x SINE Alu -18 294 83 4176 206 69 61 chr2 179083553 179083946 -74172637 - LTR49-int LTR ERV1 -4412 1919 751 269 338 40 56 chr2 179084360 179084558 -74172025 - LTR49-int LTR ERV1 -6196 562 368 195 42 0 0 chr2 179084646 179084670 -74171913 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 987 218 0 0 chr2 179084675 179084849 -74171734 - AluJo SINE Alu -28 284 111 7224 169 102 34 chr2 179085094 179086645 -74169938 + MER52A LTR ERV1 1 1755 0 1351 182 107 4 chr2 179086645 179086898 -74169685 - AluJo SINE Alu -33 279 1 828 168 7 0 chr2 179087139 179087276 -74169307 - LTR23 LTR ERV1 0 437 300 24 32 0 0 chr2 179087282 179087313 -74169270 + AT_rich Low_complexity Low_complexity 1 31 0 1930 132 46 0 chr2 179087313 179087594 -74168989 - AluSx SINE Alu -18 294 1 2041 154 0 0 chr2 179087594 179087893 -74168690 - AluSx SINE Alu -13 299 1 1460 118 30 106 chr2 179087893 179088223 -74168360 - LTR23 LTR ERV1 -132 305 1 1531 168 82 4 chr2 179088334 179088602 -74167981 + AluJo SINE Alu 6 294 -18 22 56 0 0 chr2 179088663 179088699 -74167884 + AT_rich Low_complexity Low_complexity 1 36 0 1324 183 146 66 chr2 179089006 179089521 -74167062 + MER34C LTR ERV1 30 585 0 759 164 7 14 chr2 179089668 179089814 -74166769 + MER4C LTR ERV1 1 145 -320 246 228 53 0 chr2 179090028 179090085 -74166498 + LTR4 LTR ERV1 298 357 -239 1293 155 97 12 chr2 179090171 179090429 -74166154 + LTR4 LTR ERV1 317 596 0 1895 123 0 40 chr2 179090500 179090776 -74165807 - AluSx SINE Alu -20 292 28 861 247 116 45 chr2 179091300 179091592 -74164991 + MLT1J LTR MaLR 61 373 -138 800 226 6 12 chr2 179092622 179092790 -74163793 + AluJb SINE Alu 137 303 -9 2172 136 3 0 chr2 179093742 179094052 -74162531 + AluSx SINE Alu 1 311 -1 23 0 0 0 chr2 179094064 179094087 -74162496 + AT_rich Low_complexity Low_complexity 1 23 0 2121 282 162 27 chr2 179094105 179095616 -74160967 + L1ME LINE L1 3472 5295 -869 1997 143 0 7 chr2 179095616 179095910 -74160673 + AluJb SINE Alu 1 292 -20 2121 282 162 27 chr2 179095910 179096312 -74160271 + L1ME LINE L1 5295 5641 -523 1340 256 117 39 chr2 179096314 179096860 -74159723 + MLT1E LTR MaLR 3 591 -2 2103 163 19 16 chr2 179096860 179097229 -74159354 + THE1C LTR MaLR 1 375 0 449 263 81 25 chr2 179098726 179098924 -74157659 + MIR SINE MIR 28 236 -26 260 257 38 9 chr2 179098954 179099059 -74157524 + L1M4 LINE L1 2982 3089 -3057 240 300 29 43 chr2 179099083 179099223 -74157360 + L1MEd LINE L1 3 140 -5979 2415 87 0 6 chr2 179099254 179099565 -74157018 + AluSc SINE Alu 1 309 0 2392 93 0 6 chr2 179100179 179100490 -74156093 + AluSx SINE Alu 2 310 -2 2362 118 30 57 chr2 179100510 179100776 -74155807 + L1PA13 LINE L1 5762 6015 -148 2196 105 13 0 chr2 179100776 179101081 -74155502 + AluSg SINE Alu 1 309 -1 2362 118 30 57 chr2 179101081 179101221 -74155362 + L1PA13 LINE L1 6015 6157 -6 21 0 0 0 chr2 179101221 179101242 -74155341 + AT_rich Low_complexity Low_complexity 1 21 0 2804 134 87 104 chr2 179102334 179102629 -74153954 - MER39B LTR ERV1 0 653 355 1926 131 51 0 chr2 179102629 179102903 -74153680 - AluSx SINE Alu -24 288 1 2804 134 87 104 chr2 179102903 179103263 -74153320 - MER39B LTR ERV1 -298 355 9 787 134 47 0 chr2 179103856 179103983 -74152600 + FLAM_A SINE Alu 1 133 0 1664 207 105 97 chr2 179103996 179104549 -74152034 - L1MC5 LINE L1 -35 7926 7379 702 137 292 0 chr2 179104549 179104710 -74151873 + MER3 DNA MER1_type 1 208 -1 248 149 43 0 chr2 179104716 179104763 -74151820 + MER3 DNA MER1_type 153 201 -8 1664 207 105 97 chr2 179104763 179105040 -74151543 - L1MC5 LINE L1 -586 7375 7036 * 2023 143 36 2 chr2 179105026 179105433 -74151150 - L1M4 LINE L1 -572 5606 5189 422 254 25 17 chr2 179105434 179105552 -74151031 + LTR16B LTR ERVL 86 204 -260 590 227 68 12 chr2 179105612 179105775 -74150808 + LTR16B LTR ERVL 293 464 0 605 271 60 5 chr2 179105957 179106156 -74150427 + MIR SINE MIR 47 256 -6 1601 151 18 32 chr2 179106695 179106980 -74149603 + AluJb SINE Alu 1 281 -31 756 193 0 15 chr2 179107326 179107461 -74149122 + AluSq/x SINE Alu 2 134 -179 2248 111 0 0 chr2 179107466 179107763 -74148820 + AluSx SINE Alu 6 302 -10 2594 64 0 0 chr2 179109526 179109824 -74146759 - AluY SINE Alu -13 298 1 2246 123 7 0 chr2 179109928 179110238 -74146345 - AluSx SINE Alu 0 312 1 274 242 42 21 chr2 179110257 179110352 -74146231 + MER5A DNA MER1_type 67 163 -26 1977 209 29 22 chr2 179110375 179110770 -74145813 + MLT1C LTR MaLR 10 410 -57 2384 113 0 0 chr2 179110770 179111079 -74145504 - AluSx SINE Alu -3 309 1 1977 209 29 22 chr2 179111079 179111137 -74145446 + MLT1C LTR MaLR 410 466 -1 2750 183 92 83 chr2 179111226 179112045 -74144538 - LTR1B LTR ERV1 0 826 1 2060 131 23 3 chr2 179112056 179112361 -74144222 - AluSx SINE Alu -1 311 1 1725 207 25 58 chr2 179112493 179112938 -74143645 - MLT1D LTR MaLR 0 505 76 3694 184 58 62 chr2 179113598 179113654 -74142929 + L1MD2 LINE L1 5357 5412 -947 1691 176 35 24 chr2 179113654 179113943 -74142640 + AluJo SINE Alu 2 293 -19 3694 184 58 62 chr2 179113943 179114420 -74142163 + L1MD2 LINE L1 5412 5887 -472 782 141 0 44 chr2 179114420 179114543 -74142040 + AluJo/FLAM SINE Alu 1 119 -183 2352 98 0 0 chr2 179114543 179114838 -74141745 - AluY SINE Alu -15 296 2 782 141 0 44 chr2 179114838 179114849 -74141734 + AluJo/FLAM SINE Alu 119 129 -173 3694 184 58 62 chr2 179114849 179115195 -74141388 + L1MD2 LINE L1 5887 6233 -126 1216 154 3 109 chr2 179115319 179115468 -74141115 + MER4C LTR ERV1 211 374 -91 1723 135 3 71 chr2 179115468 179115764 -74140819 + AluSx SINE Alu 1 276 -36 348 24 0 0 chr2 179115765 179115806 -74140777 + (GGAA)n Simple_repeat Simple_repeat 2 42 0 1216 154 3 109 chr2 179115806 179115939 -74140644 + MER4C LTR ERV1 373 465 0 1719 178 7 17 chr2 179116121 179116414 -74140169 + AluJo SINE Alu 1 290 -22 269 156 73 18 chr2 179117019 179117128 -74139455 + CT-rich Low_complexity Low_complexity 2 116 0 747 223 16 65 chr2 179117543 179117727 -74138856 + FAM SINE Alu 1 175 0 1965 154 0 10 chr2 179118239 179118544 -74138039 - AluSx SINE Alu -10 302 1 1971 155 3 0 chr2 179118590 179118880 -74137703 + AluSq SINE Alu 1 291 -22 2001 113 8 0 chr2 179119231 179119496 -74137087 - AluSc SINE Alu -11 298 32 1125 199 58 17 chr2 179119506 179119676 -74136907 - L1MA9 LINE L1 -38 6274 6086 2128 141 39 6 chr2 179119676 179120037 -74136546 + THE1C LTR MaLR 3 375 0 1125 199 58 17 chr2 179120037 179120158 -74136425 - L1MA9 LINE L1 -226 6086 5971 21 0 0 0 chr2 179120166 179120187 -74136396 + AT_rich Low_complexity Low_complexity 1 21 0 267 31 0 0 chr2 179120251 179120283 -74136300 + (TCC)n Simple_repeat Simple_repeat 3 34 0 462 136 91 0 chr2 179120432 179120520 -74136063 - MER67B LTR ERV1 0 661 566 1242 98 0 43 chr2 179122332 179122359 -74134224 - AluSg/x SINE Alu -1 309 282 1510 92 53 0 chr2 179122359 179122586 -74133997 - L1MA3 LINE L1 0 7724 7486 1242 98 0 43 chr2 179122586 179122742 -74133841 - AluSg/x SINE Alu -28 282 134 5194 159 20 59 chr2 179122742 179123830 -74132753 - L1MA3 LINE L1 -224 7500 6510 2237 102 0 7 chr2 179123830 179124125 -74132458 - AluSx SINE Alu -19 293 1 5194 159 20 59 chr2 179124125 179124577 -74132006 - L1MA3 LINE L1 -1214 6510 6042 * 41198 48 4 1 chr2 179124573 179130708 -74125875 - L1PA4 LINE L1 0 6155 2 2365 96 0 3 chr2 179130722 179131034 -74125549 - AluY SINE Alu 0 311 1 11311 177 15 4 chr2 179131036 179133384 -74123199 - L1MA3 LINE L1 -1511 6054 3682 1384 146 19 0 chr2 179133391 179133623 -74122960 - AluJb SINE Alu 0 311 76 12411 127 28 26 chr2 179133623 179134450 -74122133 - L1MA3 LINE L1 -3992 3573 2749 1963 158 0 3 chr2 179134450 179134760 -74121823 - AluSx SINE Alu 0 309 1 12411 127 28 26 chr2 179134760 179134982 -74121601 - L1MA3 LINE L1 -4816 2749 2529 249 33 0 0 chr2 179134982 179135012 -74121571 + (TC)n Simple_repeat Simple_repeat 1 30 0 12411 127 28 26 chr2 179135012 179136397 -74120186 - L1MA3 LINE L1 -5036 2529 453 1458 128 23 0 chr2 179136397 179136615 -74119968 + AluSx SINE Alu 23 245 -67 361 267 17 9 chr2 179136738 179136854 -74119729 + MLT1L LTR MaLR 498 614 -1 2437 86 3 0 chr2 179137781 179138083 -74118500 + AluSp SINE Alu 1 303 -10 22 0 0 0 chr2 179139481 179139503 -74117080 + AT_rich Low_complexity Low_complexity 1 22 0 1623 173 0 23 chr2 179139788 179140054 -74116529 + AluJb SINE Alu 26 285 -27 3891 73 0 0 chr2 179140054 179140588 -74115995 + L1MA1 LINE L1 5453 5986 -316 1940 147 0 0 chr2 179140615 179140887 -74115696 + AluSx SINE Alu 3 274 -38 327 167 0 0 chr2 179140889 179140955 -74115628 + GA-rich Low_complexity Low_complexity 1 66 0 1285 125 129 4 chr2 179140996 179141252 -74115331 + L1MA1 LINE L1 6015 6302 0 2114 249 79 25 chr2 179141300 179142104 -74114479 - L1PA14 LINE L1 -334 5836 5077 2555 83 0 3 chr2 179142104 179142454 -74114129 + L1PA14 LINE L1 5813 6161 0 2114 249 79 25 chr2 179142454 179143029 -74113554 - L1ME3A LINE L1 -1093 5077 4362 1986 114 50 0 chr2 179143029 179143310 -74113273 - AluSg SINE Alu -15 295 1 2114 249 79 25 chr2 179143310 179143421 -74113162 - L1ME3A LINE L1 -1808 4362 4258 344 256 173 41 chr2 179143430 179143696 -74112887 - L1ME3A LINE L1 -1981 4165 3865 795 167 50 19 chr2 179143777 179144093 -74112490 - L1MA4A LINE L1 -20 6283 5897 580 277 47 27 chr2 179144138 179144394 -74112189 - L1M4 LINE L1 -2135 4011 3751 180 0 0 0 chr2 179144400 179144420 -74112163 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 788 137 92 0 chr2 179144420 179144551 -74112032 - FRAM SINE Alu -32 144 2 426 277 48 23 chr2 179144552 179144754 -74111829 - L1M4 LINE L1 -2387 3759 3553 226 323 20 10 chr2 179144782 179144881 -74111702 + CT-rich Low_complexity Low_complexity 4 103 0 1447 223 60 38 chr2 179146082 179146535 -74110048 - MLT1C LTR MaLR 0 467 5 620 283 32 60 chr2 179146541 179146856 -74109727 + LTR16A LTR ERVL 52 357 -93 270 116 0 0 chr2 179146927 179146970 -74109613 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 298 152 0 0 chr2 179146974 179147020 -74109563 - L2 LINE L2 -5 3308 3263 215 341 33 0 chr2 179147750 179147841 -74108742 - L3b LINE CR1 -132 1451 1358 670 267 111 54 chr2 179148268 179148710 -74107873 + MLT1L LTR MaLR 149 615 0 406 300 40 45 chr2 179148730 179148930 -74107653 + MIR SINE MIR 50 248 -14 206 288 17 17 chr2 179149027 179149086 -74107497 - L3b LINE CR1 -257 1326 1268 2272 98 10 0 chr2 179149095 179149391 -74107192 + AluSx SINE Alu 3 301 -11 304 133 40 13 chr2 179149502 179149577 -74107006 - L1ME4a LINE L1 -58 6063 5987 288 0 0 0 chr2 179149591 179149623 -74106960 + (CA)n Simple_repeat Simple_repeat 2 33 0 1146 144 15 10 chr2 179149989 179150191 -74106392 + L1PB3 LINE L1 5945 6147 -7 29 28 0 0 chr2 179150201 179150237 -74106346 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr2 179150291 179150314 -74106269 + AT_rich Low_complexity Low_complexity 1 23 0 388 226 54 0 chr2 179152622 179152715 -74103868 + L2 LINE L2 3212 3309 -4 824 248 106 35 chr2 179153904 179154243 -74102340 - HAL1 LINE L1 -229 2278 1916 1137 211 108 25 chr2 179154721 179155044 -74101539 + MLT1D LTR MaLR 156 505 0 202 347 28 0 chr2 179155179 179155251 -74101332 - MIR SINE MIR -2 260 187 429 20 0 0 chr2 179155448 179155498 -74101085 + (TTCC)n Simple_repeat Simple_repeat 3 52 0 1087 153 118 5 chr2 179155504 179155707 -74100876 - AluJb SINE Alu -86 226 1 1624 166 32 11 chr2 179156640 179156951 -74099632 - AluJb SINE Alu 0 317 1 2100 127 3 0 chr2 179157803 179158095 -74098488 - AluSx SINE Alu -18 294 2 377 347 85 0 chr2 179158323 179158499 -74098084 - MIR SINE MIR -13 249 59 776 267 105 82 chr2 179159116 179159641 -74096942 - LTR67 LTR ERVL -2 555 19 299 286 157 20 chr2 179159679 179159826 -74096757 + L2 LINE L2 2989 3155 -158 2004 38 8 4 chr2 179160014 179160297 -74096286 + AluY SINE Alu 47 330 0 3759 100 47 5 chr2 179160545 179161145 -74095438 - L1MA2 LINE L1 0 6304 5680 1171 111 0 0 chr2 179161145 179161343 -74095240 + L1P LINE L1 4323 4520 -1626 262 89 0 54 chr2 179161371 179161427 -74095156 + L1PA10 LINE L1 6111 6163 -5 2151 131 0 7 chr2 179161621 179161927 -74094656 - AluSx SINE Alu -8 304 1 524 298 67 33 chr2 179161928 179162257 -74094326 + L2 LINE L2 2036 2375 -939 215 91 0 45 chr2 179162604 179162648 -74093935 + (TCTCTG)n Simple_repeat Simple_repeat 3 44 0 414 0 0 0 chr2 179162953 179162999 -74093584 + (CA)n Simple_repeat Simple_repeat 2 47 0 667 211 124 5 chr2 179163185 179163370 -74093213 + LTR33 LTR ERVL 8 214 -307 853 129 0 0 chr2 179163602 179163746 -74092837 - FLAM_C SINE Alu 0 144 1 206 393 0 0 chr2 179163994 179164078 -74092505 - L2 LINE L2 -37 3235 3152 481 333 25 0 chr2 179164963 179165161 -74091422 - L2 LINE L2 -850 2464 2262 2393 74 3 10 chr2 179165251 179165560 -74091023 + AluY SINE Alu 1 307 -4 21 36 0 0 chr2 179165952 179165980 -74090603 + AT_rich Low_complexity Low_complexity 1 28 0 760 216 46 21 chr2 179167471 179167712 -74088871 - L1ME3 LINE L1 -14 6148 5902 1816 179 0 19 chr2 179168082 179168389 -74088194 - AluJo SINE Alu -7 305 5 663 321 127 21 chr2 179168644 179169115 -74087468 - LTR33 LTR ERVL 0 521 1 261 341 22 75 chr2 179169267 179169493 -74087090 + L2 LINE L2 2849 3062 -210 322 132 206 0 chr2 179169530 179169598 -74086985 - Tigger5 DNA MER2_type 0 2323 2242 233 256 0 58 chr2 179169724 179169740 -74086843 + L2 LINE L2 3221 3236 -77 2087 135 3 0 chr2 179169740 179170051 -74086532 - AluJb SINE Alu 0 312 1 233 256 0 58 chr2 179170051 179170120 -74086463 + L2 LINE L2 3236 3301 -12 236 394 16 31 chr2 179173039 179173166 -74083417 - L2 LINE L2 -44 3228 3104 24 53 0 0 chr2 179173536 179173574 -74083009 + AT_rich Low_complexity Low_complexity 1 38 0 1140 133 60 117 chr2 179173635 179173884 -74082699 - AluJo SINE Alu -42 270 36 251 111 0 22 chr2 179174112 179174157 -74082426 + (GAAAA)n Simple_repeat Simple_repeat 5 48 0 395 129 129 0 chr2 179174233 179174303 -74082280 - MADE1 DNA Mariner -1 79 1 1841 175 0 16 chr2 179174532 179174847 -74081736 - AluJb SINE Alu 0 312 3 222 236 36 18 chr2 179177036 179177091 -74079492 - L2 LINE L2 -4 3268 3213 387 0 0 0 chr2 179177743 179177786 -74078797 + (TG)n Simple_repeat Simple_repeat 1 43 0 1480 145 24 28 chr2 179177805 179178060 -74078523 - AluJo SINE Alu -26 286 33 1948 235 37 14 chr2 179178128 179178562 -74078021 - MLT1F1 LTR MaLR -52 515 72 2394 90 0 0 chr2 179178772 179179082 -74077501 - AluY SINE Alu -1 310 1 1932 121 57 0 chr2 179179340 179179621 -74076962 - AluSx SINE Alu -15 297 1 28 29 0 0 chr2 179179923 179179958 -74076625 + AT_rich Low_complexity Low_complexity 1 35 0 271 254 0 16 chr2 179180612 179180675 -74075908 + MER112 DNA MER1_type 4 65 -195 1261 203 45 45 chr2 179180882 179181173 -74075410 - AluJb SINE Alu -18 294 4 1713 181 29 0 chr2 179181399 179181676 -74074907 - AluJo SINE Alu -24 288 4 189 107 0 0 chr2 179182484 179182512 -74074071 + (T)n Simple_repeat Simple_repeat 1 28 0 22 0 0 0 chr2 179185702 179185724 -74070859 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 179185772 179185794 -74070789 + AT_rich Low_complexity Low_complexity 1 22 0 234 0 0 0 chr2 179186219 179186245 -74070338 + (CA)n Simple_repeat Simple_repeat 1 26 0 1974 141 13 3 chr2 179186846 179187144 -74069439 - AluJb SINE Alu -11 301 1 22 88 0 0 chr2 179187242 179187299 -74069284 + AT_rich Low_complexity Low_complexity 1 57 0 237 298 0 0 chr2 179187585 179187642 -74068941 - L2 LINE L2 -68 3245 3189 2188 111 3 0 chr2 179187871 179188168 -74068415 - AluSq SINE Alu -15 298 1 387 0 0 0 chr2 179188274 179188317 -74068266 + (CA)n Simple_repeat Simple_repeat 2 44 0 2041 144 0 6 chr2 179188843 179189021 -74067562 - AluSx SINE Alu -1 311 134 2330 53 7 3 chr2 179189021 179189320 -74067263 - L1PA5 LINE L1 0 6154 5855 2041 144 0 6 chr2 179189320 179189454 -74067129 - AluSx SINE Alu -178 134 1 259 233 0 0 chr2 179191447 179191507 -74065076 + (TGAA)n Simple_repeat Simple_repeat 2 61 0 192 200 0 0 chr2 179191552 179191602 -74064981 + T-rich Low_complexity Low_complexity 1 50 0 207 176 0 0 chr2 179191749 179191783 -74064800 + (TTCA)n Simple_repeat Simple_repeat 2 35 0 217 217 0 0 chr2 179193649 179193695 -74062888 + CT-rich Low_complexity Low_complexity 2 47 0 702 251 126 22 chr2 179194297 179194528 -74062055 - MER46C DNA MER2_type -4 334 80 30 27 0 0 chr2 179194577 179194614 -74061969 + AT_rich Low_complexity Low_complexity 1 37 0 2149 128 10 0 chr2 179194777 179195073 -74061510 + AluSx SINE Alu 1 299 -13 2011 83 104 4 chr2 179195287 179195565 -74061018 - AluSx SINE Alu -6 306 1 1967 129 13 10 chr2 179196106 179196408 -74060175 - AluSx SINE Alu -9 303 1 2468 57 3 0 chr2 179196585 179196882 -74059701 - AluY SINE Alu -13 298 1 318 302 151 34 chr2 179196932 179197137 -74059446 - MIR SINE MIR -21 241 13 244 396 19 0 chr2 179198211 179198317 -74058266 - MIR3 SINE MIR -15 193 86 1806 136 11 4 chr2 179198623 179198888 -74057695 + AluSx SINE Alu 23 289 -23 838 145 8 0 chr2 179199157 179199288 -74057295 + FLAM_A SINE Alu 2 133 0 225 83 0 0 chr2 179203729 179203765 -74052818 + (T)n Simple_repeat Simple_repeat 1 36 0 25 65 0 0 chr2 179204715 179204761 -74051822 + AT_rich Low_complexity Low_complexity 1 46 0 202 273 23 0 chr2 179209209 179209253 -74047330 + L2 LINE L2 3213 3257 -15 697 156 193 0 chr2 179209433 179209568 -74047015 + MER46A DNA MER2_type 1 161 -75 1329 165 0 0 chr2 179209621 179209821 -74046762 + AluJo SINE Alu 1 200 -112 2972 135 93 52 chr2 179209822 179210234 -74046349 + MER6 DNA MER2_type 186 632 -233 1929 121 21 0 chr2 179210234 179210514 -74046069 + AluSq SINE Alu 3 288 -25 2972 135 93 52 chr2 179210514 179210700 -74045883 + MER6 DNA MER2_type 632 809 -56 799 206 14 47 chr2 179211095 179211309 -74045274 + L1M4 LINE L1 4644 4850 -1296 1788 183 6 3 chr2 179211314 179211735 -74044848 - AluJo SINE Alu 0 422 1 852 208 10 21 chr2 179211738 179211930 -74044653 + L1M4 LINE L1 4847 5036 -1110 776 201 32 7 chr2 179211989 179212143 -74044440 + FAM SINE Alu 1 158 -17 261 0 0 0 chr2 179212146 179212175 -74044408 + (TA)n Simple_repeat Simple_repeat 1 29 0 305 300 0 0 chr2 179212287 179212367 -74044216 - L1MC4 LINE L1 -1040 7002 6923 764 204 0 0 chr2 179212370 179212502 -74044081 - FLAM_A SINE Alu -8 134 3 577 202 20 0 chr2 179212604 179212703 -74043880 - AluJ/FLAM SINE Alu -211 101 1 462 211 19 0 chr2 179212713 179212817 -74043766 - L1MC5 LINE L1 -1124 6837 6732 26 30 0 0 chr2 179212819 179212852 -74043731 + AT_rich Low_complexity Low_complexity 1 33 0 402 284 126 80 chr2 179213066 179213478 -74043105 - HAL1 LINE L1 -1231 1276 846 3722 164 37 33 chr2 179213622 179214349 -74042234 - MER44D DNA MER2_type 0 605 4 1145 275 232 30 chr2 179215194 179215751 -74040832 + MER115 DNA AcHobo 24 692 -1 12213 113 11 63 chr2 179215957 179218482 -74038101 + L1P3 LINE L1 5 2485 -3976 2298 104 0 0 chr2 179218482 179218780 -74037803 + AluSg SINE Alu 1 298 -12 12213 113 11 63 chr2 179218780 179218971 -74037612 + L1P3 LINE L1 2485 2684 -3777 453 178 0 13 chr2 179219212 179219227 -74037356 - L1 LINE L1 -1179 4967 4953 1857 167 3 3 chr2 179219227 179219521 -74037062 - AluJb SINE Alu -16 296 3 453 178 0 13 chr2 179219521 179219613 -74036970 - L1 LINE L1 -1193 4953 4867 2260 156 18 36 chr2 179220019 179220461 -74036122 - Tigger2a DNA MER2_type 0 434 1 21 0 0 0 chr2 179222166 179222187 -74034396 + AT_rich Low_complexity Low_complexity 1 21 0 914 194 75 0 chr2 179223667 179223853 -74032730 + MER3 DNA MER1_type 10 209 0 256 208 0 0 chr2 179223813 179223861 -74032722 - MER3 DNA MER1_type -122 87 40 * 2326 88 7 0 chr2 179223964 179224258 -74032325 + AluSx SINE Alu 1 296 -16 225 0 0 0 chr2 179224259 179224284 -74032299 + (TA)n Simple_repeat Simple_repeat 2 26 0 3227 164 80 27 chr2 179224612 179225387 -74031196 + L1MB7 LINE L1 5368 6183 -1 391 328 141 50 chr2 179225405 179225801 -74030782 + HAL1b LINE L1 98 529 -819 795 195 141 80 chr2 179225999 179226156 -74030427 + L1MC5 LINE L1 7384 7530 -431 2183 99 19 32 chr2 179226156 179226469 -74030114 + AluSx SINE Alu 1 309 -3 795 195 141 80 chr2 179226469 179226814 -74029769 + L1MC5 LINE L1 7530 7917 -44 1644 97 166 12 chr2 179227040 179227299 -74029284 - AluSg1 SINE Alu -10 299 1 358 233 226 20 chr2 179227305 179227451 -74029132 + MER5B DNA MER1_type 3 178 0 1361 169 31 38 chr2 179227534 179227810 -74028773 + L1ME3A LINE L1 5620 5895 -275 2309 108 0 0 chr2 179227810 179228116 -74028467 - AluSq SINE Alu -7 306 1 1361 169 31 38 chr2 179228116 179228159 -74028424 + L1ME3A LINE L1 5895 5937 -233 784 106 41 0 chr2 179228236 179228359 -74028224 + L1PA13 LINE L1 6036 6163 0 1831 142 4 4 chr2 179228448 179228716 -74027867 + AluSx SINE Alu 1 268 -44 2018 202 49 11 chr2 179228767 179229212 -74027371 + MLT1C LTR MaLR 6 467 0 1324 150 44 0 chr2 179230601 179230827 -74025756 - MER46A DNA MER2_type 0 236 1 2597 115 94 40 chr2 179232021 179232683 -74023900 + L1P4 LINE L1 4805 5489 -685 216 0 0 0 chr2 179232953 179232977 -74023606 + (TA)n Simple_repeat Simple_repeat 2 25 0 1680 119 16 122 chr2 179236679 179237056 -74019527 - MER1B DNA MER1_type 0 337 1 239 291 73 43 chr2 179238092 179238223 -74018360 + MIR3 SINE MIR 6 151 -108 183 287 45 16 chr2 179238707 179238773 -74017810 - MIR SINE MIR -107 101 56 205 281 62 16 chr2 179239667 179239731 -74016852 + MIR SINE MIR 69 135 -73 593 255 40 7 chr2 179240323 179240472 -74016111 + MER63A DNA MER1_type 57 210 0 20721 78 25 7 chr2 179240710 179241006 -74015577 - L1PA7 LINE L1 -20 6134 5845 2316 95 0 7 chr2 179241006 179241311 -74015272 - AluY SINE Alu -8 303 1 20721 78 25 7 chr2 179241311 179244871 -74011712 - L1PA7 LINE L1 -309 5845 2221 2050 131 3 13 chr2 179245060 179245372 -74011211 + AluSx SINE Alu 1 309 -3 796 179 179 31 chr2 179245385 179245703 -74010880 + L1MC5 LINE L1 6923 7287 -674 1418 69 6 0 chr2 179245703 179245878 -74010705 - AluY SINE Alu -14 297 122 1375 65 0 6 chr2 179245909 179246077 -74010506 - AluY SINE Alu -144 167 1 665 204 64 26 chr2 179246104 179246368 -74010215 + L1MC5 LINE L1 7299 7572 -389 283 148 16 16 chr2 179246442 179246503 -74010080 + L1MC5 LINE L1 7512 7572 -389 258 136 0 0 chr2 179246504 179246548 -74010035 + (TG)n Simple_repeat Simple_repeat 1 44 0 642 208 46 42 chr2 179246602 179246842 -74009741 + L1MC5 LINE L1 7676 7916 -45 1775 169 10 3 chr2 179247024 179247314 -74009269 - AluJb SINE Alu -20 292 1 283 300 103 51 chr2 179247593 179247718 -74008865 + L1M4 LINE L1 3898 4015 -2131 2366 102 3 0 chr2 179247718 179248023 -74008560 + AluSp SINE Alu 1 306 -7 283 300 103 51 chr2 179248023 179248660 -74007923 + L1M4 LINE L1 4015 4700 -1446 900 207 127 11 chr2 179248713 179248988 -74007595 - MER2 DNA MER2_type -7 338 32 2874 225 63 29 chr2 179248992 179249596 -74006987 + L1MC1 LINE L1 2326 2981 -3165 2136 129 0 0 chr2 179249596 179249890 -74006693 + AluSx SINE Alu 1 294 -18 2874 225 63 29 chr2 179249890 179250300 -74006283 + L1MC1 LINE L1 2981 3375 -2771 * 3556 152 6 48 chr2 179250298 179250317 -74006266 + L1MC1 LINE L1 5010 5028 -1316 2136 104 0 4 chr2 179250317 179250621 -74005962 + AluSc SINE Alu 1 303 0 3556 152 6 48 chr2 179250621 179251487 -74005096 + L1MC1 LINE L1 5028 5849 -495 468 192 0 0 chr2 179251487 179251581 -74005002 + FLAM_A SINE Alu 45 138 0 3556 152 6 48 chr2 179251581 179251827 -74004756 + L1MC1 LINE L1 5849 6104 -240 1277 118 53 22 chr2 179251878 179252106 -74004477 + L1MC1 LINE L1 6093 6327 -6 24 0 0 0 chr2 179252145 179252169 -74004414 + AT_rich Low_complexity Low_complexity 1 24 0 343 278 162 37 chr2 179252566 179252807 -74003776 + L1MEc LINE L1 2034 2304 -4092 1018 233 72 74 chr2 179252820 179253436 -74003147 + L1MEc LINE L1 2279 2895 -3320 10629 41 8 80 chr2 179253436 179254919 -74001664 + SVA Other Other 8 1383 -3 1018 233 72 74 chr2 179254919 179255005 -74001578 + L1MEc LINE L1 2895 2980 -3235 1604 186 3 51 chr2 179255109 179255404 -74001179 + AluJb SINE Alu 1 281 -31 258 125 0 0 chr2 179255404 179255452 -74001131 + (GA)n Simple_repeat Simple_repeat 1 48 0 452 248 191 38 chr2 179255452 179255481 -74001102 + L1MEc LINE L1 3136 3159 -3056 2114 133 10 0 chr2 179255481 179255783 -74000800 + AluSx SINE Alu 1 305 -7 452 248 191 38 chr2 179255783 179255841 -74000742 + L1MEc LINE L1 3159 3207 -3008 2236 125 7 0 chr2 179255841 179256144 -74000439 + AluSx SINE Alu 1 305 -7 452 248 191 38 chr2 179256144 179256265 -74000318 + L1MEc LINE L1 3207 3377 -2838 1471 194 14 21 chr2 179256279 179256563 -74000020 + AluJo SINE Alu 1 282 -30 182 39 20 78 chr2 179256571 179256622 -73999961 + (TTTA)n Simple_repeat Simple_repeat 3 50 0 28 29 0 0 chr2 179256647 179256682 -73999901 + AT_rich Low_complexity Low_complexity 1 35 0 2385 58 48 0 chr2 179256684 179256975 -73999608 + AluY SINE Alu 1 305 -6 511 93 0 0 chr2 179257034 179257109 -73999474 - AluSp/q SINE Alu -15 298 224 540 173 10 0 chr2 179257171 179257275 -73999308 + L1M4 LINE L1 1438 1542 -5000 614 207 59 83 chr2 179257303 179257593 -73998990 + AluSx SINE Alu 1 283 -19 242 122 0 0 chr2 179257900 179257941 -73998642 - Alu SINE Alu -112 188 148 783 269 62 62 chr2 179258049 179258361 -73998222 + L1M4 LINE L1 1719 2030 -4795 2118 165 59 3 chr2 179258361 179258736 -73997847 - MSTD LTR MaLR 0 396 1 783 269 62 62 chr2 179258736 179259193 -73997390 + L1M4 LINE L1 2030 2640 -4185 2561 164 101 109 chr2 179259216 179259334 -73997249 + L1M4 LINE L1 4780 4897 -1785 2420 71 7 0 chr2 179259334 179259628 -73996955 + AluSg SINE Alu 1 296 -14 2561 164 101 109 chr2 179259628 179260119 -73996464 + L1M4 LINE L1 4897 5390 -1292 915 169 0 0 chr2 179260119 179260261 -73996322 + FLAM_C SINE Alu 1 142 -1 2561 164 101 109 chr2 179260261 179260837 -73995746 + L1M4 LINE L1 5390 6070 -612 706 242 153 62 chr2 179261042 179262106 -73994477 + L1ME3A LINE L1 4316 5467 -697 837 188 151 30 chr2 179262178 179262476 -73994107 + L1ME3A LINE L1 5618 5951 -219 348 304 90 28 chr2 179262505 179262694 -73993889 + L1ME3A LINE L1 5938 6138 -32 744 271 107 28 chr2 179262741 179263364 -73993219 + L1ME4a LINE L1 5349 6017 -104 311 296 68 0 chr2 179265469 179265557 -73991026 + L1ME4a LINE L1 5942 6035 -86 718 183 46 0 chr2 179265557 179265688 -73990895 - FLAM_C SINE Alu -4 139 3 2287 87 0 29 chr2 179265854 179266165 -73990418 + AluY SINE Alu 1 302 -9 1725 134 61 18 chr2 179266818 179267095 -73989488 + AluJb SINE Alu 1 289 -23 610 139 0 0 chr2 179268891 179268977 -73987606 + AluS SINE Alu 1 86 -226 2365 53 14 0 chr2 179268999 179269283 -73987300 - AluY SINE Alu -20 291 4 1677 168 6 43 chr2 179270707 179271029 -73985554 - AluJo SINE Alu -2 310 1 27 0 0 0 chr2 179273105 179273132 -73983451 + AT_rich Low_complexity Low_complexity 1 27 0 2053 135 7 7 chr2 179274373 179274677 -73981906 - AluJb SINE Alu -8 304 1 692 205 0 8 chr2 179274953 179275075 -73981508 + FLAM_A SINE Alu 1 121 -12 252 88 0 0 chr2 179275185 179275219 -73981364 - HSMAR1 DNA Mariner -1253 34 1 23 0 0 0 chr2 179276208 179276231 -73980352 + AT_rich Low_complexity Low_complexity 1 23 0 985 234 5 5 chr2 179277270 179277475 -73979108 + MLT1A1 LTR MaLR 1 205 -160 963 201 5 21 chr2 179277499 179277688 -73978895 + MLT1A1 LTR MaLR 180 365 0 2927 215 99 13 chr2 179278575 179278754 -73977829 + L1ME2 LINE L1 5156 5318 -846 237 65 0 0 chr2 179278754 179278785 -73977798 + (CA)n Simple_repeat Simple_repeat 1 31 0 2927 215 99 13 chr2 179278785 179279530 -73977053 + L1ME2 LINE L1 5318 6154 -10 297 340 10 0 chr2 179279699 179279796 -73976787 + MIR SINE MIR 37 134 -128 201 208 21 0 chr2 179279924 179279972 -73976611 + (TA)n Simple_repeat Simple_repeat 1 49 0 2191 158 14 3 chr2 179279972 179280334 -73976249 + MER47A DNA MER2_type 1 366 0 387 0 0 0 chr2 179280338 179280381 -73976202 + (TG)n Simple_repeat Simple_repeat 2 44 0 728 186 0 16 chr2 179280607 179280736 -73975847 - FLAM_C SINE Alu -16 127 1 2489 75 0 0 chr2 179280925 179281231 -73975352 + AluY SINE Alu 1 306 -5 180 0 0 0 chr2 179281395 179281415 -73975168 + (TG)n Simple_repeat Simple_repeat 2 21 0 3088 151 120 81 chr2 179281595 179282070 -73974513 + L1MB7 LINE L1 5004 5459 -719 911 188 0 24 chr2 179282070 179282240 -73974343 + FAM SINE Alu 1 166 -9 258 105 0 0 chr2 179282241 179282279 -73974304 + (CA)n Simple_repeat Simple_repeat 2 39 0 3088 151 120 81 chr2 179282279 179282683 -73973900 + L1MB7 LINE L1 5459 5919 -259 2008 126 0 11 chr2 179282683 179282991 -73973592 - AluSx SINE Alu 0 305 1 3088 151 120 81 chr2 179282991 179283059 -73973524 + L1MB7 LINE L1 5919 5983 -195 1360 217 19 0 chr2 179283060 179283323 -73973260 + AluJo SINE Alu 1 268 -44 780 170 85 31 chr2 179283323 179283515 -73973068 + L1MB7 LINE L1 5976 6179 -5 2348 99 0 6 chr2 179283528 179283841 -73972742 - AluSx SINE Alu -1 311 1 1849 143 7 13 chr2 179284264 179284572 -73972011 + AluJb SINE Alu 7 312 0 2152 109 17 0 chr2 179284609 179284911 -73971672 + AluSp SINE Alu 3 309 -4 5683 56 0 10 chr2 179287130 179287850 -73968733 - L1PA6 LINE L1 -3 6151 5439 1321 191 114 0 chr2 179288303 179288454 -73968129 - AluJo SINE Alu -20 292 160 180 0 0 0 chr2 179288454 179288474 -73968109 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1321 191 114 0 chr2 179288474 179288584 -73967999 - AluJo SINE Alu -152 160 1 1982 82 27 10 chr2 179292920 179293214 -73963369 - L1PA14 LINE L1 0 6161 5863 1956 169 0 0 chr2 179294491 179294793 -73961790 - AluJo SINE Alu -9 303 2 1180 208 74 25 chr2 179294818 179295102 -73961481 + MER2 DNA MER2_type 47 344 -1 238 149 85 0 chr2 179295203 179295250 -73961333 + Charlie7 DNA MER1_type 1710 1760 -852 1400 211 54 41 chr2 179295287 179295656 -73960927 + MLT1A2 LTR MaLR 1 374 0 2086 144 3 0 chr2 179295754 179296052 -73960531 + AluSx SINE Alu 7 305 -7 1579 142 0 4 chr2 179296928 179297154 -73959429 + AluJb SINE Alu 12 236 -76 475 114 79 5 chr2 179297520 179297914 -73958669 + (TA)n Simple_repeat Simple_repeat 1 422 0 2493 82 20 8 chr2 179298305 179298658 -73957925 + L1PA14 LINE L1 5800 6156 -5 2396 15 0 0 chr2 179298875 179299142 -73957441 + AluYa5 SINE Alu 1 267 -44 1116 285 84 27 chr2 179299251 179299340 -73957243 - L1ME LINE L1 -378 5784 5702 2014 124 50 7 chr2 179299340 179299639 -73956944 - AluSx SINE Alu 0 312 1 1116 285 84 27 chr2 179299639 179300346 -73956237 - L1ME LINE L1 -460 5702 4927 22 0 0 0 chr2 179300348 179300370 -73956213 + AT_rich Low_complexity Low_complexity 1 22 0 421 235 60 98 chr2 179300594 179300709 -73955874 - MIR SINE MIR 0 262 155 1893 161 0 10 chr2 179300709 179301008 -73955575 - AluJb SINE Alu -15 297 2 421 235 60 98 chr2 179301008 179301075 -73955508 - MIR SINE MIR -107 155 87 180 308 77 13 chr2 179301649 179301727 -73954856 - MIR3 SINE MIR -13 195 113 22 35 0 0 chr2 179301824 179301853 -73954730 + AT_rich Low_complexity Low_complexity 1 29 0 1472 189 63 14 chr2 179301995 179302281 -73954302 + AluJb SINE Alu 1 300 -12 35 16 5 0 chr2 179302990 179303065 -73953518 + AT_rich Low_complexity Low_complexity 1 42 0 1916 155 3 16 chr2 179303127 179303431 -73953152 - AluJb SINE Alu -12 300 1 189 0 0 0 chr2 179303892 179303913 -73952670 + (TC)n Simple_repeat Simple_repeat 2 22 0 2193 107 0 3 chr2 179304648 179304937 -73951646 + AluSx SINE Alu 1 288 -24 226 88 0 0 chr2 179305683 179305717 -73950866 + MER51A LTR ERV1 3 36 -598 1479 145 187 66 chr2 179305717 179306112 -73950471 + MER51A LTR ERV1 205 634 0 318 165 239 18 chr2 179306112 179306221 -73950362 + MER51A-int LTR ERV1 1 133 -7683 2416 216 24 7 chr2 179306265 179306724 -73949859 + MER51A-int LTR ERV1 47 513 -4367 1076 233 30 43 chr2 179307028 179307328 -73949255 + MER51A-int LTR ERV1 554 849 -6967 674 277 17 59 chr2 179307353 179307642 -73948941 + MER51A-int LTR ERV1 1546 1822 -5269 253 225 0 62 chr2 179307876 179307956 -73948627 + MER51-int LTR ERV1 966 1040 -5489 396 309 0 7 chr2 179308280 179308429 -73948154 + MER51-int LTR ERV1 2342 2489 -4187 2078 130 3 3 chr2 179308840 179309132 -73947451 - AluSg SINE Alu -18 292 1 1521 168 66 0 chr2 179309449 179309723 -73946860 + MER51-int LTR ERV1 2081 2372 -3574 1101 180 0 14 chr2 179309718 179309940 -73946643 + MER51-int LTR ERV1 4111 4329 -551 * 2126 115 26 7 chr2 179309943 179310247 -73946336 + AluSx SINE Alu 1 310 -2 417 115 192 0 chr2 179310251 179310329 -73946254 + MER51-int LTR ERV1 3441 3533 -4004 1451 290 28 32 chr2 179310579 179311654 -73944929 + MER51-int LTR ERV1 7334 7816 0 688 116 0 0 chr2 179311794 179311889 -73944694 - AluS SINE Alu -218 95 1 226 194 30 15 chr2 179312006 179312073 -73944510 + CT-rich Low_complexity Low_complexity 5 72 0 21 57 0 0 chr2 179312484 179312519 -73944064 + AT_rich Low_complexity Low_complexity 1 35 0 264 259 0 0 chr2 179314364 179314445 -73942138 + CT-rich Low_complexity Low_complexity 2 82 0 405 123 0 0 chr2 179315238 179315303 -73941280 + (CA)n Simple_repeat Simple_repeat 2 66 0 21 0 0 0 chr2 179316598 179316619 -73939964 + AT_rich Low_complexity Low_complexity 1 21 0 695 206 64 28 chr2 179317046 179317264 -73939319 + L1MC5 LINE L1 7706 7931 -30 21 0 0 0 chr2 179317266 179317287 -73939296 + AT_rich Low_complexity Low_complexity 1 21 0 201 74 0 0 chr2 179317710 179317737 -73938846 + (TAGG)n Simple_repeat Simple_repeat 2 28 0 1523 303 68 24 chr2 179317863 179318480 -73938103 + HAL1 LINE L1 22 665 -1842 1302 162 0 13 chr2 179318500 179318728 -73937855 + AluJb SINE Alu 82 306 -6 2733 223 137 78 chr2 179318729 179319388 -73937195 + HAL1 LINE L1 887 1506 -1001 2111 114 0 0 chr2 179319388 179319696 -73936887 - AluSx SINE Alu 0 310 3 1923 141 7 3 chr2 179319700 179319991 -73936592 - AluJb SINE Alu -20 292 1 2733 223 137 78 chr2 179319991 179320254 -73936329 + HAL1 LINE L1 1508 1754 -753 3173 137 32 71 chr2 179320254 179320629 -73935954 + L1MB5 LINE L1 5551 5939 -235 2296 101 0 3 chr2 179320629 179320926 -73935657 + AluSq SINE Alu 1 296 -17 3173 137 32 71 chr2 179320926 179321137 -73935446 + L1MB5 LINE L1 5939 6112 -62 2130 123 3 7 chr2 179321137 179321439 -73935144 - AluSx SINE Alu -11 301 1 3173 137 32 71 chr2 179321439 179321500 -73935083 + L1MB5 LINE L1 6112 6174 0 2733 223 137 78 chr2 179321500 179321670 -73934913 + HAL1 LINE L1 1754 1913 -594 1954 143 7 0 chr2 179321670 179321957 -73934626 + AluSx SINE Alu 1 289 -23 2733 223 137 78 chr2 179321957 179322114 -73934469 + HAL1 LINE L1 1913 2059 -448 2368 63 35 0 chr2 179322114 179322401 -73934182 - AluY SINE Alu -12 299 3 2733 223 137 78 chr2 179322401 179322619 -73933964 + HAL1 LINE L1 2059 2450 -57 23 54 0 0 chr2 179324650 179324687 -73931896 + AT_rich Low_complexity Low_complexity 1 37 0 2187 114 0 0 chr2 179324844 179325133 -73931450 + AluSg SINE Alu 1 289 -21 2053 122 3 3 chr2 179327226 179327512 -73929071 + AluSx SINE Alu 1 286 -26 222 62 0 0 chr2 179327515 179327547 -73929036 + (CATA)n Simple_repeat Simple_repeat 2 33 0 232 213 82 0 chr2 179327816 179327877 -73928706 - AluSx SINE Alu -3 297 232 2291 67 27 14 chr2 179327877 179328174 -73928409 - AluY SINE Alu -10 301 1 1759 133 0 8 chr2 179328174 179328422 -73928161 - AluSx SINE Alu -66 246 1 1519 121 0 0 chr2 179328455 179328653 -73927930 - AluSx SINE Alu -33 279 82 * 2371 75 0 63 chr2 179328652 179328983 -73927600 - AluSg SINE Alu 0 310 1 790 54 0 0 chr2 179328985 179329078 -73927505 - AluSx SINE Alu -218 94 2 2302 96 10 0 chr2 179329504 179329807 -73926776 - AluSg SINE Alu -4 306 1 1932 159 0 3 chr2 179329858 179330153 -73926430 - AluJb SINE Alu -18 294 1 664 141 7 148 chr2 179331352 179331494 -73925089 - FLAM_A SINE Alu -11 122 1 2189 104 3 13 chr2 179331712 179332010 -73924573 + AluSx SINE Alu 1 295 -17 2302 103 0 0 chr2 179332603 179332904 -73923679 + AluSg SINE Alu 1 301 -9 678 153 29 15 chr2 179333241 179333378 -73923205 + L1MB2 LINE L1 6030 6168 -3 1392 202 129 121 chr2 179334293 179334559 -73922024 + L1MC5 LINE L1 7021 7283 -678 1489 107 44 0 chr2 179334559 179334765 -73921818 - MER20 DNA MER1_type -4 215 1 1392 202 129 121 chr2 179334765 179334926 -73921657 + L1MC5 LINE L1 7283 7441 -520 451 82 49 0 chr2 179334926 179334987 -73921596 - U6 snRNA snRNA -43 64 1 1392 202 129 121 chr2 179334987 179335397 -73921186 + L1MC5 LINE L1 7441 7926 -35 1883 151 3 17 chr2 179335400 179335692 -73920891 + AluJo SINE Alu 1 288 -24 21 43 0 22 chr2 179335692 179335719 -73920864 + AT_rich Low_complexity Low_complexity 1 28 -17 1954 159 0 0 chr2 179335719 179336009 -73920574 + AluJb SINE Alu 1 290 -22 21 43 0 22 chr2 179336009 179336027 -73920556 + AT_rich Low_complexity Low_complexity 28 45 0 944 179 0 0 chr2 179336061 179336212 -73920371 + FAM SINE Alu 1 151 -34 204 67 0 0 chr2 179336227 179336257 -73920326 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 22 0 0 0 chr2 179336663 179336685 -73919898 + AT_rich Low_complexity Low_complexity 1 22 0 556 313 47 21 chr2 179336865 179337098 -73919485 + Charlie8 DNA MER1_type 1 239 -2178 1090 171 0 11 chr2 179337623 179337799 -73918784 + AluJo SINE Alu 120 293 -19 2014 151 31 54 chr2 179337811 179338083 -73918500 + L1MB4 LINE L1 5800 6062 -118 2182 106 0 23 chr2 179338083 179338385 -73918198 - AluSq SINE Alu -18 295 1 2014 151 31 54 chr2 179338385 179338502 -73918081 + L1MB4 LINE L1 6062 6180 0 276 247 75 32 chr2 179338512 179338605 -73917978 + L1ME2 LINE L1 6068 6164 0 1946 128 0 64 chr2 179338615 179338942 -73917641 + AluSx SINE Alu 1 306 -6 319 241 83 69 chr2 179338961 179339039 -73917544 + L1MC4 LINE L1 7823 7898 -144 195 114 0 0 chr2 179339039 179339074 -73917509 + (TGGA)n Simple_repeat Simple_repeat 3 37 0 319 241 83 69 chr2 179339074 179339116 -73917467 + L1MC4 LINE L1 7898 7938 -104 1788 153 3 37 chr2 179339116 179339460 -73917123 + AluJo SINE Alu 1 334 0 319 241 83 69 chr2 179339460 179339553 -73917030 + L1MC4 LINE L1 7938 8041 -1 1738 177 3 10 chr2 179339719 179340024 -73916559 - AluJo SINE Alu -9 303 1 1803 173 0 17 chr2 179341216 179341517 -73915066 - AluJo SINE Alu -14 298 3 2201 119 3 10 chr2 179341560 179341871 -73914712 + AluSg SINE Alu 1 309 -1 214 287 50 30 chr2 179342268 179342369 -73914214 - L2 LINE L2 -12 3301 3199 366 347 35 90 chr2 179342959 179343302 -73913281 + L2 LINE L2 2945 3268 -4 344 236 317 37 chr2 179343340 179343501 -73913082 + L2 LINE L2 3107 3312 -1 2192 122 0 0 chr2 179343695 179343983 -73912600 + AluSx SINE Alu 1 288 -24 33 25 0 0 chr2 179343983 179344023 -73912560 + AT_rich Low_complexity Low_complexity 1 40 0 8092 78 29 120 chr2 179344169 179345675 -73910908 - SVA Other Other -11 1375 7 2125 95 7 33 chr2 179345854 179346158 -73910425 - AluY SINE Alu -15 296 1 33 25 0 0 chr2 179346192 179346232 -73910351 + AT_rich Low_complexity Low_complexity 1 40 0 2366 84 3 10 chr2 179346317 179346627 -73909956 - AluSp SINE Alu -5 308 1 1799 168 9 23 chr2 179347021 179347366 -73909217 + L1MB7 LINE L1 5826 6165 -19 31 0 0 0 chr2 179347619 179347650 -73908933 + AT_rich Low_complexity Low_complexity 1 31 0 592 244 98 26 chr2 179347783 179347976 -73908607 + HAL1 LINE L1 1308 1514 -993 649 238 69 21 chr2 179347977 179348166 -73908417 + L2 LINE L2 3108 3305 -8 871 228 160 38 chr2 179348166 179348354 -73908229 + HAL1 LINE L1 1989 2153 -354 1961 150 7 0 chr2 179348354 179348648 -73907935 + AluJb SINE Alu 1 296 -16 871 228 160 38 chr2 179348648 179348859 -73907724 + HAL1 LINE L1 2153 2437 -70 1827 162 20 0 chr2 179348938 179349240 -73907343 + AluJb SINE Alu 1 308 -4 1322 154 0 19 chr2 179349296 179349504 -73907079 + AluSx SINE Alu 1 204 -108 1034 54 8 8 chr2 179349504 179349633 -73906950 - AluY SINE Alu -182 129 1 223 364 68 23 chr2 179349633 179349809 -73906774 + L2 LINE L2 2602 2785 -529 892 108 0 0 chr2 179349833 179349953 -73906630 + AluSx SINE Alu 182 301 -9 279 336 61 38 chr2 179350118 179350249 -73906334 + MIR3 SINE MIR 42 175 -33 184 30 61 0 chr2 179350803 179350836 -73905747 + A-rich Low_complexity Low_complexity 2 36 0 185 366 68 41 chr2 179350895 179351179 -73905404 - L2 LINE L2 -421 2893 2599 2211 113 0 0 chr2 179351179 179351480 -73905103 + AluY SINE Alu 1 301 -10 340 314 76 66 chr2 179351562 179351865 -73904718 - L1MC4a LINE L1 -1627 6181 5876 2339 72 3 3 chr2 179351956 179352246 -73904337 + AluSp SINE Alu 1 290 -23 1243 113 0 17 chr2 179352253 179352430 -73904153 + AluSq SINE Alu 132 305 -8 1139 127 0 6 chr2 179352683 179352848 -73903735 + L1PA16 LINE L1 5784 5947 -219 3349 148 78 15 chr2 179352848 179353436 -73903147 + MER51A LTR ERV1 1 625 -9 1097 183 8 8 chr2 179353459 179353644 -73902939 + L1PA16 LINE L1 5944 6124 -44 2454 69 7 0 chr2 179353644 179353947 -73902636 + AluY SINE Alu 1 305 -6 1097 183 8 8 chr2 179353947 179353985 -73902598 + L1PA16 LINE L1 6124 6161 -7 703 144 8 80 chr2 179354566 179354691 -73901892 - AluJo SINE Alu -105 207 92 2209 98 0 16 chr2 179355397 179355702 -73900881 + AluSg SINE Alu 1 300 -10 290 209 47 81 chr2 179356110 179356196 -73900387 - L2 LINE L2 -35 3237 3155 220 182 91 0 chr2 179356219 179356263 -73900320 + MIR SINE MIR 32 79 -129 24 53 0 0 chr2 179357062 179357100 -73899483 + AT_rich Low_complexity Low_complexity 1 38 0 1129 221 89 31 chr2 179357867 179358292 -73898291 + L1MC5 LINE L1 7504 7953 -8 2141 94 18 0 chr2 179358301 179358577 -73898006 - AluSx SINE Alu -18 294 14 1027 191 27 0 chr2 179358577 179358760 -73897823 - L1PA16 LINE L1 -11 6155 5968 912 246 20 0 chr2 179358923 179359118 -73897465 + MIR SINE MIR 64 262 0 2013 119 25 0 chr2 179359150 179359458 -73897125 - AluSx SINE Alu 0 312 1 331 330 61 26 chr2 179359706 179359821 -73896762 + L2 LINE L2 3150 3268 -4 934 275 135 30 chr2 179360250 179360679 -73895904 + MLT1K LTR MaLR 7 480 -108 365 268 161 12 chr2 179361327 179361495 -73895088 - MIR SINE MIR -45 217 25 312 124 24 4 chr2 179361586 179361647 -73894936 + Alu SINE Alu 1 48 -253 362 280 149 11 chr2 179361673 179361848 -73894735 + L2 LINE L2 2871 3069 -244 1670 168 0 63 chr2 179361924 179362257 -73894326 - AluJo SINE Alu 0 312 1 1784 85 0 29 chr2 179362268 179362514 -73894069 - AluSg SINE Alu -18 292 54 2087 106 0 45 chr2 179362562 179362874 -73893709 + AluSq SINE Alu 1 298 -15 193 182 55 91 chr2 179362953 179363008 -73893575 + L2 LINE L2 3210 3262 -10 2001 56 0 0 chr2 179363010 179363244 -73893339 + AluY SINE Alu 1 234 -77 290 241 163 0 chr2 179363285 179363426 -73893157 - MER113 DNA MER1_type? -56 465 302 2065 117 29 0 chr2 179363476 179363782 -73892801 + AluSx SINE Alu 1 314 0 273 282 77 18 chr2 179364127 179364297 -73892286 - L1MC4a LINE L1 -1877 5931 5752 1442 134 9 18 chr2 179364309 179364526 -73892057 - AluJb SINE Alu -12 300 86 2431 73 0 3 chr2 179364588 179364888 -73891695 - AluY SINE Alu -12 299 1 246 245 39 49 chr2 179364913 179365015 -73891568 - L1MC4a LINE L1 -577 5665 5565 1775 193 0 13 chr2 179366161 179366477 -73890106 - AluJo SINE Alu 0 312 1 2284 94 0 16 chr2 179366513 179366821 -73889762 - AluSx SINE Alu -9 303 1 453 293 245 0 chr2 179367834 179368042 -73888541 + MIR SINE MIR 3 261 -1 182 260 0 60 chr2 179368276 179368326 -73888257 + L2 LINE L2 3222 3268 -4 273 29 0 0 chr2 179368547 179368581 -73888002 + (TG)n Simple_repeat Simple_repeat 2 35 0 1743 176 4 4 chr2 179368582 179368861 -73887722 - AluJb SINE Alu -33 279 1 2191 94 24 3 chr2 179369103 179369391 -73887192 + AluSg SINE Alu 1 294 -16 253 351 67 18 chr2 179369505 179369670 -73886913 - MIR3 SINE MIR -12 196 24 336 198 219 0 chr2 179370108 179370204 -73886379 - MIR3 SINE MIR -5 203 87 2493 45 10 0 chr2 179370311 179370603 -73885980 - AluY SINE Alu -16 295 1 189 107 0 0 chr2 179370688 179370716 -73885867 + (T)n Simple_repeat Simple_repeat 1 28 0 227 79 26 0 chr2 179373262 179373300 -73883283 + (TG)n Simple_repeat Simple_repeat 2 40 0 2142 102 0 3 chr2 179373300 179373584 -73882999 - AluSx SINE Alu -29 283 1 1495 85 5 10 chr2 179373593 179373793 -73882790 - AluSg/x SINE Alu -13 299 101 252 331 123 39 chr2 179374125 179374279 -73882304 + L3 LINE CR1 1406 1572 -5 2237 100 3 37 chr2 179374348 179374548 -73882035 + AluSg SINE Alu 1 206 -104 2092 112 7 20 chr2 179374548 179374852 -73881731 + AluSx SINE Alu 1 300 -12 1957 114 34 27 chr2 179374854 179375152 -73881431 + AluSp SINE Alu 3 302 -11 2237 100 3 37 chr2 179375152 179375269 -73881314 + AluSg SINE Alu 207 310 0 520 104 0 0 chr2 179375362 179375439 -73881144 - AluSp/q SINE Alu -2 311 235 6117 26 33 1 chr2 179375544 179376263 -73880320 + SVA Other Other 644 1385 -1 3679 197 34 44 chr2 179376264 179377304 -73879279 + L1ME2 LINE L1 5129 6154 -10 310 270 90 50 chr2 179377340 179377540 -73879043 + L1MC4 LINE L1 7834 8041 -1 2182 119 0 0 chr2 179377757 179378043 -73878540 + AluSx SINE Alu 1 286 -26 568 87 12 52 chr2 179378043 179378215 -73878368 + (TA)n Simple_repeat Simple_repeat 1 165 0 2101 139 3 0 chr2 179429717 179430019 -73826564 + AluSx SINE Alu 1 303 -9 479 250 58 6 chr2 179430075 179430231 -73826352 + L1MC4a LINE L1 7195 7358 -450 519 187 12 15 chr2 179430233 179430419 -73826164 + MER8 DNA MER2_type 1 239 0 519 228 142 80 chr2 179430426 179430729 -73825854 + L1MC4 LINE L1 7272 7555 -487 1659 176 24 7 chr2 179430729 179431019 -73825564 - AluJo SINE Alu -15 297 3 519 228 142 80 chr2 179431019 179431133 -73825450 + L1MC4 LINE L1 7555 7660 -382 213 39 0 0 chr2 179431133 179431159 -73825424 + (TA)n Simple_repeat Simple_repeat 2 27 0 519 228 142 80 chr2 179431159 179431276 -73825307 + L1MC4 LINE L1 7660 7952 -90 195 114 0 0 chr2 179431834 179431869 -73824714 + (T)n Simple_repeat Simple_repeat 1 35 0 766 274 119 69 chr2 179431908 179432001 -73824582 - L1ME3A LINE L1 -9 6161 6074 2344 57 0 0 chr2 179432001 179432319 -73824264 - AluY SINE Alu 0 318 1 766 274 119 69 chr2 179432319 179432502 -73824081 - L1ME3A LINE L1 -96 6074 5902 1783 180 7 0 chr2 179432502 179432797 -73823786 - AluJo SINE Alu -9 303 7 766 274 119 69 chr2 179432797 179432891 -73823692 - L1ME3A LINE L1 -268 5902 5814 2545 66 0 0 chr2 179432891 179433192 -73823391 + AluY SINE Alu 1 301 -10 766 274 119 69 chr2 179433192 179433255 -73823328 - L1ME3A LINE L1 -356 5814 5756 2275 64 0 0 chr2 179433255 179433521 -73823062 - AluY SINE Alu -45 266 1 766 274 119 69 chr2 179433521 179433739 -73822844 - L1ME3A LINE L1 -414 5756 5473 2364 93 0 7 chr2 179433834 179434134 -73822449 + AluSp SINE Alu 1 298 -15 225 0 0 0 chr2 179434152 179434177 -73822406 + (TG)n Simple_repeat Simple_repeat 1 25 0 265 158 79 66 chr2 179434359 179434435 -73822148 - MIR SINE MIR -13 249 173 406 283 17 25 chr2 179434566 179434686 -73821897 - MIR SINE MIR -110 152 34 2177 85 7 33 chr2 179436656 179436961 -73819622 - AluSg SINE Alu -13 297 1 2172 54 98 0 chr2 179436966 179437242 -73819341 - AluSg SINE Alu -7 303 1 21 0 0 0 chr2 179437343 179437364 -73819219 + AT_rich Low_complexity Low_complexity 1 21 0 2172 79 0 70 chr2 179437733 179438049 -73818534 - AluSc SINE Alu -10 299 6 2037 131 3 3 chr2 179438167 179438464 -73818119 + AluSg SINE Alu 1 297 -13 2487 69 3 28 chr2 179438761 179439078 -73817505 - AluSx SINE Alu -3 309 1 651 216 172 24 chr2 179439602 179439940 -73816643 + L1ME4a LINE L1 5734 6121 0 2351 109 0 0 chr2 179439993 179440296 -73816287 + AluSx SINE Alu 1 303 -9 19457 95 15 21 chr2 179440374 179440766 -73815817 + Charlie3 DNA MER1_type 2 395 -2311 1540 118 0 0 chr2 179440766 179440995 -73815588 + AluSg/x SINE Alu 80 308 -2 19457 95 15 21 chr2 179440995 179442128 -73814455 + Charlie3 DNA MER1_type 395 1533 -1173 1572 178 82 0 chr2 179442128 179442409 -73814174 + AluJo SINE Alu 1 304 -8 19457 95 15 21 chr2 179442409 179443157 -73813426 + Charlie3 DNA MER1_type 1533 2260 -446 1903 177 0 0 chr2 179443157 179443451 -73813132 + AluSx SINE Alu 1 294 -18 19457 95 15 21 chr2 179443451 179443896 -73812687 + Charlie3 DNA MER1_type 2260 2706 0 824 160 0 16 chr2 179443963 179444088 -73812495 - FLAM_C SINE Alu -20 123 1 531 0 0 0 chr2 179444122 179444181 -73812402 + (GA)n Simple_repeat Simple_repeat 2 60 0 1126 175 90 9 chr2 179444203 179444426 -73812157 - AluJo SINE Alu -31 281 41 1541 147 0 0 chr2 179445023 179445248 -73811335 + AluJb SINE Alu 73 297 -15 1600 257 138 55 chr2 179445565 179446298 -73810285 + L2 LINE L2 83 754 -2560 2093 137 3 13 chr2 179446298 179446611 -73809972 - AluJb SINE Alu -2 310 1 1600 257 138 55 chr2 179446611 179446667 -73809916 + L2 LINE L2 754 804 -2510 2371 98 7 0 chr2 179446667 179446973 -73809610 - AluSq SINE Alu -5 308 1 1600 257 138 55 chr2 179446973 179447055 -73809528 + L2 LINE L2 804 1027 -2287 201 121 0 0 chr2 179447206 179447239 -73809344 + (GGAA)n Simple_repeat Simple_repeat 4 36 0 2061 149 3 0 chr2 179449356 179449652 -73806931 - AluJb SINE Alu -14 298 2 191 202 22 146 chr2 179450799 179450888 -73805695 - MIR3 SINE MIR -23 185 108 2277 115 0 3 chr2 179451564 179451869 -73804714 + AluSx SINE Alu 1 304 -8 375 254 99 39 chr2 179451879 179452060 -73804523 - HAL1 LINE L1 -945 1562 1371 550 216 216 5 chr2 179452117 179452321 -73804262 + MIR SINE MIR 9 255 -7 564 268 142 19 chr2 179452336 179452661 -73803922 - HAL1 LINE L1 -1156 1351 987 1512 179 0 70 chr2 179452696 179452997 -73803586 + AluJb SINE Alu 1 280 -32 587 292 48 14 chr2 179453011 179453106 -73803477 - L1MC4 LINE L1 -19 8023 7933 258 32 0 0 chr2 179453106 179453137 -73803446 + (CA)n Simple_repeat Simple_repeat 2 32 0 587 292 48 14 chr2 179453137 179453329 -73803254 - L1MC4 LINE L1 -109 7933 7609 2416 87 0 0 chr2 179453336 179453634 -73802949 + AluY SINE Alu 1 298 -13 713 279 90 19 chr2 179453656 179453978 -73802605 + L1MC4a LINE L1 5580 5924 -1884 1152 170 42 19 chr2 179454235 179454447 -73802136 + MER20 DNA MER1_type 1 217 -2 1572 120 124 40 chr2 179454562 179454837 -73801746 + AluJb SINE Alu 1 298 -14 580 230 92 6 chr2 179455019 179455193 -73801390 + L1MC/D LINE L1 5631 5819 -1989 828 159 0 8 chr2 179455669 179455801 -73800782 - FLAM_A SINE Alu -2 131 1 1736 154 6 56 chr2 179455801 179455983 -73800600 - AluJo SINE Alu -4 308 147 1450 131 0 5 chr2 179455983 179456197 -73800386 - AluSg/x SINE Alu -9 303 91 1736 154 6 56 chr2 179456197 179456338 -73800245 - AluJo SINE Alu -165 147 1 207 281 16 0 chr2 179456438 179456502 -73800081 + MIR SINE MIR 28 92 -116 251 196 87 22 chr2 179457348 179457440 -73799143 - MIR3 SINE MIR -1 207 110 1037 70 23 8 chr2 179457490 179457619 -73798964 + AluSq/x SINE Alu 1 131 -182 691 90 0 18 chr2 179457719 179457830 -73798753 + (TTCC)n Simple_repeat Simple_repeat 4 112 0 2014 125 10 7 chr2 179457839 179458136 -73798447 - AluSx SINE Alu -14 298 1 23 68 0 0 chr2 179458450 179458494 -73798089 + AT_rich Low_complexity Low_complexity 1 44 0 2096 137 0 0 chr2 179458656 179458949 -73797634 - AluJo SINE Alu -19 293 1 206 196 0 78 chr2 179459134 179459185 -73797398 - MIR3 SINE MIR -10 198 152 2099 119 14 0 chr2 179459216 179459510 -73797073 - AluSx SINE Alu -14 298 1 213 339 0 0 chr2 179462266 179462331 -73794252 - MIR SINE MIR 0 262 198 1310 135 0 15 chr2 179462358 179462558 -73794025 + AluJb SINE Alu 103 299 -13 314 242 71 0 chr2 179462558 179462657 -73793926 - MIR SINE MIR -91 171 66 2286 110 7 0 chr2 179462798 179463106 -73793477 + AluSx SINE Alu 3 312 0 1612 121 4 21 chr2 179463349 179463588 -73792995 + AluSx SINE Alu 1 235 -77 269 205 0 13 chr2 179463780 179463848 -73792735 + (TATG)n Simple_repeat Simple_repeat 2 70 -8 373 132 118 0 chr2 179463848 179463916 -73792667 - MADE1 DNA Mariner 0 80 5 269 205 0 13 chr2 179463916 179463925 -73792658 + (TATG)n Simple_repeat Simple_repeat 70 78 0 1845 130 76 21 chr2 179464956 179465286 -73791297 + THE1C LTR MaLR 28 375 0 2215 105 0 16 chr2 179465303 179465609 -73790974 - AluSx SINE Alu -11 301 1 2160 122 0 13 chr2 179465860 179466164 -73790419 - AluSx SINE Alu -12 300 1 1071 180 76 5 chr2 179466459 179466670 -73789913 - AluJb SINE Alu -1 311 86 2478 102 46 28 chr2 179466709 179467059 -73789524 - L1PB2 LINE L1 -3 6148 5806 234 0 0 0 chr2 179467059 179467085 -73789498 + (TA)n Simple_repeat Simple_repeat 2 27 0 2138 89 25 4 chr2 179467086 179467367 -73789216 - AluSx SINE Alu -15 297 11 2478 102 46 28 chr2 179467367 179467406 -73789177 - L1PB2 LINE L1 -344 5807 5750 2580 60 0 0 chr2 179467720 179468020 -73788563 - AluY SINE Alu -11 300 1 969 188 14 29 chr2 179468244 179468451 -73788132 - L1MC5 LINE L1 -62 7899 7696 383 250 82 59 chr2 179468446 179468702 -73787881 - L1MEc LINE L1 -5174 1046 770 * 1302 116 0 6 chr2 179468702 179468874 -73787709 - FRAM SINE Alu -9 167 1 287 283 90 14 chr2 179469062 179469207 -73787376 - L1MEc LINE L1 -6179 217 62 2173 98 28 0 chr2 179469235 179469522 -73787061 - AluSx SINE Alu -17 295 1 1024 246 127 39 chr2 179469533 179469997 -73786586 - L1MC5 LINE L1 -447 7514 7010 3399 157 81 24 chr2 179470000 179470574 -73786009 - MER44D DNA MER2_type -1885 702 87 2362 66 3 10 chr2 179470574 179470879 -73785704 - AluY SINE Alu -8 303 1 3399 157 81 24 chr2 179470879 179470933 -73785650 - MER44D DNA MER2_type -2500 87 38 2135 142 0 16 chr2 179471665 179471982 -73784601 - AluJb SINE Alu 0 312 1 1665 150 11 4 chr2 179472021 179472281 -73784302 - AluSx SINE Alu 0 312 51 2190 95 7 29 chr2 179472286 179472592 -73783991 - AluSx SINE Alu -13 299 1 2978 131 34 12 chr2 179472603 179472813 -73783770 - L1MB8 LINE L1 -2 6176 5972 2596 55 0 0 chr2 179472813 179473121 -73783462 - AluY SINE Alu -3 308 1 2978 131 34 12 chr2 179473121 179473414 -73783169 - L1MB8 LINE L1 -206 5972 5662 2365 92 0 7 chr2 179475350 179475655 -73780928 - AluSx SINE Alu -7 305 3 2143 108 25 3 chr2 179475660 179475946 -73780637 - AluSx SINE Alu -20 292 1 2178 112 3 0 chr2 179476181 179476485 -73780098 - AluY SINE Alu -6 305 1 709 218 8 99 chr2 179476607 179476696 -73779887 + L1ME LINE L1 5581 5677 -444 1735 109 124 8 chr2 179476696 179476961 -73779622 + AluSg1 SINE Alu 1 296 -13 709 218 8 99 chr2 179476961 179477133 -73779450 + L1ME LINE L1 5677 5818 -303 212 170 43 0 chr2 179477155 179477202 -73779381 + L2 LINE L2 2657 2705 -609 1857 141 25 14 chr2 179477212 179477495 -73779088 + AluJo SINE Alu 1 286 -26 2157 124 0 57 chr2 179477509 179477840 -73778743 + AluSx SINE Alu 1 312 0 246 32 0 0 chr2 179477843 179477874 -73778709 + (TA)n Simple_repeat Simple_repeat 1 31 0 1898 149 0 32 chr2 179477876 179478192 -73778391 + AluJb SINE Alu 3 308 -4 523 297 155 5 chr2 179478209 179478533 -73778050 + L2 LINE L2 2698 3068 -245 413 225 14 36 chr2 179478646 179478774 -73777809 - HAL1 LINE L1 -1344 1163 1037 297 0 0 0 chr2 179478774 179478807 -73777776 + (CA)n Simple_repeat Simple_repeat 2 34 0 314 321 13 13 chr2 179478835 179478987 -73777596 - L1MC4 LINE L1 -1315 6727 6610 186 382 0 0 chr2 179478999 179479054 -73777529 + L2 LINE L2 3141 3195 -77 2454 92 0 0 chr2 179479381 179479686 -73776897 + AluSg SINE Alu 1 305 -5 762 275 129 83 chr2 179479820 179480602 -73775981 + HAL1 LINE L1 95 912 -1595 1204 195 0 0 chr2 179480602 179480807 -73775776 + AluJo SINE Alu 1 205 -107 303 250 134 0 chr2 179480836 179480948 -73775635 + HAL1 LINE L1 905 1031 -1476 808 135 0 0 chr2 179480966 179481077 -73775506 + FLAM_C SINE Alu 1 111 -32 26 30 0 0 chr2 179481088 179481121 -73775462 + AT_rich Low_complexity Low_complexity 1 33 0 253 241 19 0 chr2 179481441 179481495 -73775088 - MER5A DNA MER1_type -84 105 51 2092 107 21 3 chr2 179481528 179481817 -73774766 - AluSc SINE Alu -15 294 1 594 206 106 19 chr2 179482099 179482259 -73774324 - L2 LINE L2 -22 3291 3118 2357 82 0 7 chr2 179484436 179484730 -73771853 + AluSp SINE Alu 1 292 -21 642 232 36 30 chr2 179485001 179485169 -73771414 + L1ME2 LINE L1 5986 6154 -10 2433 79 0 16 chr2 179485387 179485692 -73770891 - AluY SINE Alu -11 300 1 405 0 0 0 chr2 179486282 179486327 -73770256 + (TG)n Simple_repeat Simple_repeat 2 46 0 194 328 35 0 chr2 179486505 179486563 -73770020 + MIR SINE MIR 86 145 -63 436 327 61 6 chr2 179486623 179486788 -73769795 - MER5A DNA MER1_type 0 189 16 22 0 0 0 chr2 179486858 179486880 -73769703 + AT_rich Low_complexity Low_complexity 1 22 0 1730 144 0 35 chr2 179486880 179487164 -73769419 - AluJb SINE Alu -26 286 13 481 152 54 22 chr2 179487253 179487345 -73769238 - FRAM SINE Alu -21 155 61 1392 222 65 66 chr2 179487397 179488015 -73768568 - L1MC5 LINE L1 -163 7798 7182 235 288 34 0 chr2 179488628 179488687 -73767896 - L2 LINE L2 0 3272 3212 2135 155 39 3 chr2 179488792 179489128 -73767455 + MER7A DNA MER2_type 1 346 0 222 308 0 0 chr2 179489132 179489197 -73767386 + (TG)n Simple_repeat Simple_repeat 2 66 0 598 301 124 15 chr2 179489561 179490009 -73766574 - L2 LINE L2 -93 3220 2730 477 34 0 0 chr2 179490065 179490124 -73766459 + (TG)n Simple_repeat Simple_repeat 2 60 0 1610 176 3 52 chr2 179490654 179490960 -73765623 + AluJb SINE Alu 1 291 -21 2182 119 0 3 chr2 179491291 179491584 -73764999 - AluSx SINE Alu -20 292 1 2239 108 0 7 chr2 179491596 179491919 -73764664 - AluSp SINE Alu 0 313 2 2712 200 61 61 chr2 179494008 179494307 -73762276 + L1MC5 LINE L1 7004 7302 -659 2126 90 14 0 chr2 179494307 179494622 -73761961 + AluY SINE Alu 1 311 0 2712 200 61 61 chr2 179494622 179494883 -73761700 + L1MC5 LINE L1 7302 7562 -399 2184 107 3 10 chr2 179494883 179495181 -73761402 - AluSx SINE Alu -16 296 1 2712 200 61 61 chr2 179495181 179495325 -73761258 + L1MC5 LINE L1 7562 7705 -256 2076 110 20 10 chr2 179495325 179495624 -73760959 + AluSg SINE Alu 1 302 -8 2712 200 61 61 chr2 179495624 179495839 -73760744 + L1MC5 LINE L1 7704 7925 -36 289 282 39 0 chr2 179495852 179495930 -73760653 + MIR SINE MIR 46 126 -136 243 0 0 0 chr2 179495931 179495958 -73760625 + (TG)n Simple_repeat Simple_repeat 2 28 0 216 0 0 0 chr2 179496420 179496444 -73760139 + (A)n Simple_repeat Simple_repeat 1 24 0 28 0 0 0 chr2 179496646 179496674 -73759909 + AT_rich Low_complexity Low_complexity 1 28 0 833 192 7 0 chr2 179496674 179496825 -73759758 - AluSg/x SINE Alu -24 286 135 207 0 0 0 chr2 179497187 179497210 -73759373 + (A)n Simple_repeat Simple_repeat 1 23 0 920 150 0 0 chr2 179497210 179497343 -73759240 + THE1A LTR MaLR 223 355 0 2665 136 5 10 chr2 179497343 179497755 -73758828 + THE1A-int LTR MaLR 1 410 -1170 1775 185 3 0 chr2 179498110 179498418 -73758165 + AluSx SINE Alu 1 309 -3 1068 151 6 0 chr2 179498626 179498798 -73757785 - AluSg/x SINE Alu -3 307 135 207 0 0 0 chr2 179499160 179499183 -73757400 + (A)n Simple_repeat Simple_repeat 1 23 0 900 150 0 0 chr2 179499183 179499316 -73757267 + THE1A LTR MaLR 223 355 0 549 124 22 0 chr2 179499316 179499405 -73757178 + THE1A-int LTR MaLR 1 91 -1489 1073 179 54 131 chr2 179499523 179499553 -73757030 + LTR41 LTR ERVL 440 471 -302 1977 133 10 10 chr2 179499553 179499871 -73756712 - AluSx SINE Alu 0 312 1 1073 179 54 131 chr2 179499871 179500191 -73756392 + LTR41 LTR ERVL 471 763 -10 1071 246 90 0 chr2 179500204 179500538 -73756045 + L1M4 LINE L1 2244 2607 -3539 2420 109 0 0 chr2 179500539 179500851 -73755732 - AluSq SINE Alu -1 312 1 507 189 31 0 chr2 179500851 179500978 -73755605 + L1M4 LINE L1 2866 2996 -3150 479 152 18 62 chr2 179500980 179501092 -73755491 - MER119 DNA MER1_type 0 583 477 3522 102 66 68 chr2 179501092 179501344 -73755239 - Tigger3(Golem) DNA MER2_type 0 3029 2778 2293 101 0 0 chr2 179501344 179501667 -73754916 + AluSq SINE Alu 1 323 0 3522 102 66 68 chr2 179501667 179501689 -73754894 - Tigger3(Golem) DNA MER2_type -251 2778 2757 7357 53 20 1 chr2 179501689 179502699 -73753884 + L1PA6 LINE L1 5128 6154 0 3522 102 66 68 chr2 179502699 179502919 -73753664 - Tigger3(Golem) DNA MER2_type -272 2757 2532 2174 143 0 0 chr2 179502919 179503227 -73753356 - AluSx SINE Alu 0 312 5 3522 102 66 68 chr2 179503227 179503364 -73753219 - Tigger3(Golem) DNA MER2_type -497 2532 2396 687 124 9 44 chr2 179503367 179503480 -73753103 - AluSx SINE Alu -10 299 191 1026 116 0 0 chr2 179503486 179503624 -73752959 - AluSx SINE Alu -174 138 1 12674 114 19 37 chr2 179503625 179504040 -73752543 - Tigger3(Golem) DNA MER2_type -633 2396 1975 2402 96 0 0 chr2 179504040 179504343 -73752240 - AluSq SINE Alu -10 303 1 12674 114 19 37 chr2 179504343 179504863 -73751720 - Tigger3(Golem) DNA MER2_type -1054 1975 1447 2432 88 0 0 chr2 179504863 179505169 -73751414 + AluSg SINE Alu 1 306 -4 12674 114 19 37 chr2 179505169 179505291 -73751292 - Tigger3(Golem) DNA MER2_type -1582 1447 1324 1688 161 0 87 chr2 179505291 179505613 -73750970 + AluSx SINE Alu 9 302 -10 12674 114 19 37 chr2 179505613 179506436 -73750147 - Tigger3(Golem) DNA MER2_type -1705 1324 551 2306 73 0 36 chr2 179506436 179506738 -73749845 - AluY SINE Alu -20 291 1 12674 114 19 37 chr2 179506738 179506850 -73749733 - Tigger3(Golem) DNA MER2_type -2478 551 438 251 224 61 0 chr2 179506850 179506899 -73749684 - Tigger3(Golem) DNA MER2_type -2977 52 1 * 1779 223 46 15 chr2 179506899 179507356 -73749227 - MER119 DNA MER1_type -105 478 8 329 302 13 47 chr2 179507427 179507576 -73749007 + MLT1-int LTR MaLR 74 217 -1154 318 288 144 14 chr2 179507594 179507740 -73748843 + MLT1K LTR MaLR 405 569 -19 815 151 0 0 chr2 179507766 179507935 -73748648 + AluSg/x SINE Alu 164 332 0 2385 82 0 7 chr2 179508058 179508351 -73748232 - AluSg SINE Alu -18 292 2 228 135 0 0 chr2 179508581 179508618 -73747965 + (TA)n Simple_repeat Simple_repeat 1 37 0 324 0 0 0 chr2 179508726 179508762 -73747821 + (CA)n Simple_repeat Simple_repeat 1 36 0 207 0 0 0 chr2 179508761 179508784 -73747799 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 832 163 47 8 chr2 179508786 179508915 -73747668 - FAM SINE Alu -27 158 25 1182 223 58 61 chr2 179509744 179509850 -73746733 + MLT1H LTR MaLR 1 106 -436 669 198 9 0 chr2 179509850 179509961 -73746622 + MER81 DNA DNA 1 112 -2 1182 223 58 61 chr2 179509961 179510349 -73746234 + MLT1H LTR MaLR 106 540 -2 689 152 23 29 chr2 179510384 179510728 -73745855 + L1MD1 LINE L1 5647 6108 -134 735 206 0 22 chr2 179510728 179510864 -73745719 + FLAM_A SINE Alu 1 133 0 689 152 23 29 chr2 179510864 179510997 -73745586 + L1MD1 LINE L1 6108 6240 -2 2110 108 18 0 chr2 179510997 179511283 -73745300 - AluSg SINE Alu -19 291 1 312 384 73 9 chr2 179511340 179511559 -73745024 + L2 LINE L2 2804 3036 -236 2174 120 0 13 chr2 179511837 179512153 -73744430 + AluSx SINE Alu 1 312 0 2206 123 0 16 chr2 179512168 179512485 -73744098 + AluSx SINE Alu 1 312 0 363 212 0 0 chr2 179513482 179513567 -73743016 + (TA)n Simple_repeat Simple_repeat 2 86 0 427 295 56 17 chr2 179513707 179513907 -73742676 - MLT1J1 LTR MaLR -186 223 19 443 250 148 0 chr2 179513969 179514077 -73742506 - MIR SINE MIR -136 126 3 2569 51 0 0 chr2 179514118 179514413 -73742170 + AluY SINE Alu 1 295 -16 416 291 121 19 chr2 179514431 179514696 -73741887 + L1 LINE L1 5098 5389 -757 724 125 8 50 chr2 179514701 179514841 -73741742 + FLAM_A SINE Alu 1 135 0 1021 47 16 0 chr2 179515240 179515368 -73741215 - AluY SINE Alu -10 301 172 198 0 0 0 chr2 179515792 179515814 -73740769 + (A)n Simple_repeat Simple_repeat 1 22 0 1055 90 0 0 chr2 179515814 179515947 -73740636 + THE1A LTR MaLR 223 355 0 12798 79 9 6 chr2 179515947 179517521 -73739062 + THE1A-int LTR MaLR 1 1580 0 3009 73 0 0 chr2 179517521 179517876 -73738707 + THE1A LTR MaLR 1 355 0 763 191 13 7 chr2 179518133 179518285 -73738298 - MER103 DNA DNA -2 164 12 1258 250 135 24 chr2 179518286 179518740 -73737843 + MLT1D LTR MaLR 1 592 -1 803 143 0 0 chr2 179519138 179519257 -73737326 + FLAM_C SINE Alu 1 119 -24 2222 118 0 0 chr2 179520432 179520728 -73735855 - AluSx SINE Alu -16 296 1 36 0 0 0 chr2 179521856 179521892 -73734691 + AT_rich Low_complexity Low_complexity 1 36 0 1009 288 72 34 chr2 179522249 179522804 -73733779 - L1MC4a LINE L1 -1934 5874 5299 2128 139 0 3 chr2 179522978 179523288 -73733295 - AluJo SINE Alu -3 309 1 24 0 0 0 chr2 179523662 179523686 -73732897 + AT_rich Low_complexity Low_complexity 1 24 0 5207 166 20 37 chr2 179523697 179523931 -73732652 - L1MA9 LINE L1 -38 6274 6038 1592 164 52 4 chr2 179523931 179524200 -73732383 - AluJo SINE Alu -16 296 15 5207 166 20 37 chr2 179524200 179524771 -73731812 - L1MA9 LINE L1 -274 6038 5483 2003 152 0 3 chr2 179524771 179525067 -73731516 - AluSx SINE Alu -17 295 1 5207 166 20 37 chr2 179525067 179525300 -73731283 - L1MA9 LINE L1 -829 5483 5248 1025 165 24 0 chr2 179525440 179525610 -73730973 - AluJb SINE Alu -19 293 120 982 272 145 58 chr2 179526058 179526595 -73729988 - MLT1K LTR MaLR -3 585 2 229 273 75 72 chr2 179526920 179527268 -73729315 - L1ME4a LINE L1 -44 6077 5729 198 0 0 0 chr2 179527654 179527676 -73728907 + (TTTTA)n Simple_repeat Simple_repeat 4 25 0 918 138 15 92 chr2 179527678 179527873 -73728710 - AluSg/x SINE Alu -19 293 114 804 144 0 0 chr2 179528117 179528235 -73728348 - AluJb SINE Alu -194 118 1 2225 99 3 22 chr2 179528723 179529036 -73727547 - AluSx SINE Alu -5 307 1 232 194 13 181 chr2 179529146 179529301 -73727282 + L2 LINE L2 3143 3271 -1 628 187 84 0 chr2 179529453 179529560 -73727023 + FLAM_A SINE Alu 1 162 0 382 22 0 0 chr2 179529560 179529606 -73726977 + (CAAAA)n Simple_repeat Simple_repeat 2 160 0 23 54 0 0 chr2 179530599 179530636 -73725947 + AT_rich Low_complexity Low_complexity 1 37 0 1683 133 25 73 chr2 179530689 179531004 -73725579 - AluJb SINE Alu -12 300 1 4789 140 43 56 chr2 179531213 179532070 -73724513 - L1MB3 LINE L1 0 6183 5337 1827 174 3 0 chr2 179532070 179532363 -73724220 - AluJo SINE Alu -18 294 1 4789 140 43 56 chr2 179532363 179532398 -73724185 - L1MB3 LINE L1 -846 5337 5303 6247 111 19 3 chr2 179532947 179533900 -73722683 - L1PA16 LINE L1 -10 6156 5166 183 42 0 0 chr2 179533900 179533924 -73722659 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6247 111 19 3 chr2 179533924 179534408 -73722175 - L1PA16 LINE L1 -1000 5166 4691 2994 180 40 21 chr2 179534408 179534430 -73722153 - L1MB3 LINE L1 -816 5330 5310 219 69 0 0 chr2 179534430 179534459 -73722124 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2994 180 40 21 chr2 179534459 179535114 -73721469 - L1MB3 LINE L1 -836 5310 4640 349 187 13 13 chr2 179535116 179535191 -73721392 - L1MCa LINE L1 -4756 1670 1596 194 0 0 37 chr2 179535192 179535219 -73721364 + (TTTTA)n Simple_repeat Simple_repeat 4 29 0 45640 33 1 1 chr2 179535219 179541358 -73715225 - L1PA3 LINE L1 -10 6145 9 2430 197 56 14 chr2 179541365 179541923 -73714660 - L1MCa LINE L1 -4788 1640 1060 1515 37 91 5 chr2 179542043 179542230 -73714353 - AluY SINE Alu -108 203 1 1210 201 84 8 chr2 179542364 179542613 -73713970 - LTR41 LTR ERVL -505 268 1 2639 243 63 84 chr2 179542613 179542839 -73713744 - L1M4b LINE L1 -4042 3096 2867 1199 240 3 68 chr2 179542839 179543160 -73713423 - AluJo SINE Alu -2 300 1 2639 243 63 84 chr2 179543160 179543204 -73713379 - L1M4b LINE L1 -4271 2867 2824 2442 61 0 3 chr2 179543204 179543498 -73713085 - AluY SINE Alu -18 293 1 2639 243 63 84 chr2 179543498 179543651 -73712932 - L1M4b LINE L1 -4314 2824 2669 959 264 46 9 chr2 179543651 179543867 -73712716 + MER58A DNA MER1_type 1 224 0 2639 243 63 84 chr2 179543867 179544030 -73712553 - L1M4b LINE L1 -4469 2669 2504 1638 173 20 33 chr2 179544030 179544336 -73712247 - AluJo SINE Alu -10 302 1 2639 243 63 84 chr2 179544336 179545044 -73711539 - L1M4b LINE L1 -4634 2504 1783 2279 130 0 0 chr2 179545044 179545352 -73711231 - AluSp SINE Alu -5 308 1 1596 188 39 0 chr2 179545356 179545638 -73710945 - AluJo SINE Alu -19 293 1 2639 243 63 84 chr2 179545638 179545718 -73710865 - L1M4b LINE L1 -5358 1780 1700 1738 189 3 6 chr2 179545718 179546031 -73710552 - AluJo SINE Alu 0 312 1 2639 243 63 84 chr2 179546031 179546159 -73710424 - L1M4b LINE L1 -5438 1700 1441 469 275 118 14 chr2 179546159 179546370 -73710213 - MER112 DNA MER1_type -25 235 3 1501 183 29 7 chr2 179546584 179546858 -73709725 + AluJb SINE Alu 1 280 -32 288 0 0 0 chr2 179546858 179546890 -73709693 + (CAAAA)n Simple_repeat Simple_repeat 3 34 0 231 365 0 12 chr2 179546918 179547003 -73709580 + MER5A DNA MER1_type 101 184 -5 391 336 9 9 chr2 179547076 179547192 -73709391 - MIR SINE MIR -134 128 13 290 276 140 35 chr2 179547230 179547381 -73709202 + MIR SINE MIR 17 183 -61 240 287 8 131 chr2 179548458 179548695 -73707888 - L1ME3A LINE L1 -1 6169 5962 2257 112 0 0 chr2 179548720 179549014 -73707569 - AluSx SINE Alu -18 294 1 1084 231 132 3 chr2 179549023 179549328 -73707255 - L1ME3A LINE L1 -304 5866 5524 484 236 54 128 chr2 179549923 179550006 -73706577 - L1MC5 LINE L1 -55 7906 7818 2027 155 0 3 chr2 179550006 179550309 -73706274 - AluJb SINE Alu -10 302 1 484 236 54 128 chr2 179550309 179550512 -73706071 - L1MC5 LINE L1 -143 7818 7666 818 149 35 0 chr2 179550512 179550626 -73705957 - FLAM_C SINE Alu -15 118 1 484 236 54 128 chr2 179550626 179550816 -73705767 - L1MC5 LINE L1 -295 7666 7464 2311 179 75 22 chr2 179551041 179551534 -73705049 - Charlie1b DNA MER1_type -4 519 1 799 190 8 0 chr2 179551746 179551867 -73704716 - FLAM_C SINE Alu -20 123 2 549 319 53 0 chr2 179551974 179552143 -73704440 + MIR3 SINE MIR 2 179 -29 730 71 10 0 chr2 179552239 179552338 -73704245 + L1PA14 LINE L1 5998 6097 -64 2009 143 10 19 chr2 179552526 179552840 -73703743 - AluSx SINE Alu -1 311 1 1361 165 114 0 chr2 179552898 179553153 -73703430 + MER58B DNA MER1_type 56 339 -2 9615 109 30 33 chr2 179553223 179553623 -73702960 + Tigger1 DNA MER2_type 1 401 -2017 4995 98 21 1 chr2 179553623 179554300 -73702283 + L1PA14 LINE L1 5468 6157 -4 9615 109 30 33 chr2 179554300 179554382 -73702201 + Tigger1 DNA MER2_type 401 482 -1936 1818 151 10 24 chr2 179554382 179554674 -73701909 - AluJb SINE Alu -18 294 7 9615 109 30 33 chr2 179554674 179555660 -73700923 + Tigger1 DNA MER2_type 482 1465 -953 833 182 19 13 chr2 179555668 179555822 -73700761 - AluJo/FRAM SINE Alu -24 288 134 1620 195 20 3 chr2 179555822 179556120 -73700463 - AluJo SINE Alu -8 304 2 808 181 0 0 chr2 179556147 179556274 -73700309 + FLAM_A SINE Alu 1 127 -6 2376 93 39 3 chr2 179556284 179556616 -73699967 + Tigger1 DNA MER2_type 1465 1808 -610 2214 108 20 3 chr2 179556616 179556912 -73699671 - AluSq SINE Alu -12 301 1 195 69 0 0 chr2 179557121 179557150 -73699433 + (T)n Simple_repeat Simple_repeat 1 29 0 470 283 224 14 chr2 179557211 179557564 -73699019 + L2 LINE L2 2887 3313 0 2187 100 14 0 chr2 179557618 179557908 -73698675 - AluSx SINE Alu -18 294 1 1322 156 9 18 chr2 179557913 179558138 -73698445 - AluSg/x SINE Alu -6 304 82 402 299 14 7 chr2 179558143 179558290 -73698293 - L1MC4a LINE L1 -1868 5940 5793 2324 106 0 10 chr2 179558324 179558635 -73697948 - AluY SINE Alu -3 308 1 198 0 0 0 chr2 179559836 179559858 -73696725 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 189 0 0 0 chr2 179560159 179560180 -73696403 + (T)n Simple_repeat Simple_repeat 1 21 0 188 244 0 0 chr2 179560438 179560479 -73696104 + MIR SINE MIR 6 46 -216 868 198 25 11 chr2 179561600 179561773 -73694810 + MIR SINE MIR 26 193 -63 3644 117 82 16 chr2 179562379 179562937 -73693646 - LTR49 LTR ERV1 0 595 1 1556 121 9 0 chr2 179564017 179564241 -73692342 + AluSg/x SINE Alu 75 300 -12 853 178 345 36 chr2 179564724 179565214 -73691369 - MLT1E1 LTR MaLR -1 623 1 1868 162 0 19 chr2 179566065 179566374 -73690209 + AluJb SINE Alu 1 303 -9 2318 100 0 7 chr2 179566725 179567035 -73689548 - AluSg SINE Alu -2 308 1 2103 146 0 9 chr2 179567735 179568050 -73688533 - AluJo SINE Alu 0 312 1 2332 95 8 56 chr2 179568311 179568369 -73688214 - L1PB1 LINE L1 -1 6150 6091 2239 117 16 0 chr2 179568369 179568676 -73687907 - AluSx SINE Alu 0 312 1 2332 95 8 56 chr2 179568676 179568974 -73687609 - L1PB1 LINE L1 -60 6091 5811 367 194 45 0 chr2 179569733 179569800 -73686783 + MER81 DNA DNA 4 73 -41 311 217 206 0 chr2 179569812 179569904 -73686679 + MIR SINE MIR 104 214 -48 1974 115 0 7 chr2 179569930 179570199 -73686384 - AluSx SINE Alu -45 267 1 631 255 49 16 chr2 179571070 179571254 -73685329 + MLT1I LTR MaLR 3 192 -217 4259 166 59 34 chr2 179571281 179571998 -73684585 + L1MB7 LINE L1 5088 5849 -335 2000 131 10 3 chr2 179571998 179572289 -73684294 + AluSx SINE Alu 1 293 -19 4259 166 59 34 chr2 179572289 179572633 -73683950 + L1MB7 LINE L1 5849 6183 -1 26 50 0 0 chr2 179572829 179572869 -73683714 + AT_rich Low_complexity Low_complexity 1 40 0 738 227 0 0 chr2 179573371 179573503 -73683080 + FLAM_A SINE Alu 1 132 -1 910 197 67 6 chr2 179573601 179573779 -73682804 - MER5A DNA MER1_type 0 189 1 1397 213 126 46 chr2 179573986 179574399 -73682184 + MLT2B1 LTR ERVL 1 446 -74 216 158 0 0 chr2 179574405 179574443 -73682140 + (CA)n Simple_repeat Simple_repeat 2 39 0 266 114 91 0 chr2 179574453 179574497 -73682086 + MLT2D LTR ERVL 367 414 0 385 288 68 8 chr2 179574941 179575059 -73681524 + MIR SINE MIR 8 132 -130 466 267 0 0 chr2 179575087 179575192 -73681391 - LTR33A LTR ERVL 0 523 419 260 292 34 11 chr2 179575962 179576051 -73680532 + MIR3 SINE MIR 112 202 -6 340 227 18 0 chr2 179576392 179576502 -73680081 + (TA)n Simple_repeat Simple_repeat 2 113 0 934 216 27 5 chr2 179576729 179576914 -73679669 + MER5A DNA MER1_type 1 189 0 353 183 17 0 chr2 179576946 179577006 -73679577 + MER5A DNA MER1_type 129 189 0 225 0 0 0 chr2 179578163 179578188 -73678395 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 206 305 162 0 chr2 179578784 179578889 -73677694 - MIR SINE MIR -64 144 23 2539 167 47 0 chr2 179579301 179579708 -73676875 + MSTB LTR MaLR 1 426 0 207 0 0 0 chr2 179580033 179580056 -73676527 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 261 279 19 19 chr2 179580417 179580521 -73676062 - MLT1K LTR MaLR 0 588 485 257 254 0 28 chr2 179580516 179580587 -73675996 - MLT1L LTR MaLR -116 499 431 * 647 226 36 80 chr2 179580590 179580773 -73675810 - MLT1G3 LTR MaLR -262 268 99 2173 133 0 3 chr2 179580773 179581074 -73675509 + AluSx SINE Alu 1 300 -12 647 226 36 80 chr2 179581074 179581165 -73675418 - MLT1G3 LTR MaLR -431 99 6 231 366 183 5 chr2 179582324 179582510 -73674073 - L3b LINE CR1 -37 1546 1328 322 277 0 108 chr2 179583368 179583424 -73673159 - L2 LINE L2 -266 3047 3011 2138 116 44 0 chr2 179583424 179583717 -73672866 + AluSx SINE Alu 1 306 -6 322 277 0 108 chr2 179583717 179583790 -73672793 - L2 LINE L2 -302 3011 2932 1473 226 66 23 chr2 179584121 179584252 -73672331 + MLT1A1 LTR MaLR 1 125 -240 2018 133 7 13 chr2 179584252 179584552 -73672031 + AluSq SINE Alu 1 298 -15 1473 226 66 23 chr2 179584552 179584770 -73671813 + MLT1A1 LTR MaLR 125 365 0 2258 107 7 3 chr2 179584797 179585105 -73671478 - AluSx SINE Alu -3 309 1 764 298 191 23 chr2 179585112 179585775 -73670808 + L2 LINE L2 2327 3090 -182 862 289 50 57 chr2 179586255 179586656 -73669927 - L2 LINE L2 0 3313 2916 1231 248 175 34 chr2 179586662 179587026 -73669557 - L2 LINE L2 -582 2732 2278 2283 108 3 19 chr2 179587026 179587340 -73669243 + AluSx SINE Alu 1 309 -3 1231 248 175 34 chr2 179587340 179587471 -73669112 - L2 LINE L2 -1036 2278 2167 2842 121 6 20 chr2 179587664 179587791 -73668792 - L1PB4 LINE L1 -296 5860 5733 2542 73 0 0 chr2 179587791 179588092 -73668491 - AluY SINE Alu -10 301 1 1858 191 3 0 chr2 179588094 179588393 -73668190 - AluJo SINE Alu -12 300 1 2842 121 6 20 chr2 179588393 179588751 -73667832 - L1PB4 LINE L1 -424 5732 5379 234 220 5 16 chr2 179589290 179589355 -73667228 - L2 LINE L2 0 3313 3210 309 335 58 97 chr2 179589447 179589725 -73666858 + L2 LINE L2 3005 3271 -1 228 370 120 0 chr2 179589885 179589985 -73666598 - L2 LINE L2 -3 3269 3158 580 274 65 23 chr2 179590750 179590965 -73665618 + LTR67 LTR ERVL 334 557 0 497 291 128 18 chr2 179590966 179591193 -73665390 - MIR SINE MIR -5 257 6 2119 85 42 7 chr2 179591243 179591526 -73665057 + AluY SINE Alu 1 293 -18 748 231 35 12 chr2 179591637 179591810 -73664773 + MER69A DNA AcHobo 1 177 0 695 172 69 40 chr2 179592258 179592432 -73664151 - MER96B DNA MER1_type? -238 179 1 404 240 73 21 chr2 179592717 179592813 -73663770 - MER5B DNA MER1_type -33 145 45 699 239 52 14 chr2 179592813 179593026 -73663557 - L1ME1 LINE L1 -4 6162 5942 330 227 0 30 chr2 179593027 179593093 -73663490 + MER5B DNA MER1_type 113 176 -2 2281 123 3 0 chr2 179593100 179593410 -73663173 + AluSq SINE Alu 1 311 -2 312 161 0 0 chr2 179594938 179595000 -73661583 + (CA)n Simple_repeat Simple_repeat 1 62 0 445 252 95 87 chr2 179595311 179595568 -73661015 + L1MEd LINE L1 924 1332 -1158 2517 211 29 71 chr2 179595685 179595848 -73660735 + L1M4 LINE L1 2 170 -6372 2415 110 0 0 chr2 179595848 179596156 -73660427 + AluSg SINE Alu 1 308 -2 2517 211 29 71 chr2 179596156 179596725 -73659858 + L1M4 LINE L1 170 703 -5839 411 168 71 53 chr2 179596727 179596840 -73659743 + L1M4 LINE L1 1140 1254 -5288 283 139 0 0 chr2 179596859 179596902 -73659681 + AluSg/x SINE Alu 183 225 -75 2169 136 3 3 chr2 179597034 179597342 -73659241 - AluSx SINE Alu -4 308 1 364 67 0 0 chr2 179598003 179598048 -73658535 + LTR7 LTR ERV1 406 450 0 1579 94 58 0 chr2 179598254 179598477 -73658106 - THE1A LTR MaLR -119 236 1 2192 116 0 17 chr2 179598953 179599255 -73657328 + AluSq SINE Alu 3 299 -14 328 159 9 212 chr2 179599544 179599657 -73656926 - MER2 DNA MER2_type -246 99 10 1611 146 30 3 chr2 179599668 179599963 -73656620 + L1MB5 LINE L1 5677 5979 -195 295 203 0 0 chr2 179599966 179600030 -73656553 + MER52A LTR ERV1 1 64 -1691 6171 201 78 33 chr2 179600420 179601886 -73654697 + MER52A LTR ERV1 209 1740 -15 961 145 62 6 chr2 179601918 179602097 -73654486 + L1MB5 LINE L1 5986 6174 0 2331 179 11 112 chr2 179602191 179603240 -73653343 + L1MB1 LINE L1 4675 5567 -743 554 145 0 0 chr2 179603240 179603323 -73653260 + FLAM_A SINE Alu 45 127 -15 3243 176 13 7 chr2 179603323 179603937 -73652646 + L1MB1 LINE L1 5550 6167 -1 445 250 83 9 chr2 179604164 179604272 -73652311 + L2 LINE L2 3190 3305 -8 1902 190 49 22 chr2 179605341 179605788 -73650795 + MLT1C LTR MaLR 1 459 -8 2084 119 0 77 chr2 179605803 179606139 -73650444 - AluSg SINE Alu 0 310 1 1113 220 108 32 chr2 179606322 179606722 -73649861 + L1MC4 LINE L1 6745 7174 -868 271 163 0 0 chr2 179606804 179606853 -73649730 + MER2 DNA MER2_type 297 345 0 269 228 10 99 chr2 179606893 179606994 -73649589 - MIR SINE MIR -97 111 20 1335 156 51 28 chr2 179607057 179607504 -73649079 - MER1B DNA MER1_type 0 329 30 190 240 107 27 chr2 179608023 179608098 -73648485 - L2 LINE L2 -1 3271 3191 397 265 165 9 chr2 179608370 179608915 -73647668 + L1MC5 LINE L1 7138 7674 -172 348 258 21 0 chr2 179608979 179609076 -73647507 + L1MC4 LINE L1 7943 8041 -1 382 283 9 9 chr2 179609534 179609640 -73646943 + MIR3 SINE MIR 90 195 -13 1870 68 0 0 chr2 179610393 179610627 -73645956 - L1PA8 LINE L1 0 6172 5939 2200 92 4 0 chr2 179610662 179610943 -73645640 - AluY SINE Alu -29 282 1 6247 125 8 7 chr2 179611132 179612751 -73643832 + L1PB1 LINE L1 4534 6149 -2 420 309 88 22 chr2 179613011 179613192 -73643391 + L2 LINE L2 3115 3307 -6 783 207 43 0 chr2 179613518 179613658 -73642925 + FRAM SINE Alu 1 146 -30 2333 61 0 31 chr2 179613680 179613974 -73642609 + AluY SINE Alu 1 285 -26 1193 129 6 0 chr2 179614074 179614286 -73642297 + AluSq SINE Alu 135 313 0 241 371 0 0 chr2 179614904 179615001 -73641582 - MIR SINE MIR -85 177 81 381 22 0 0 chr2 179615202 179615248 -73641335 + (TG)n Simple_repeat Simple_repeat 2 47 0 1589 80 21 42 chr2 179615621 179615858 -73640725 - L1PA10 LINE L1 0 6168 5937 292 326 171 17 chr2 179616799 179616974 -73639609 + MIR SINE MIR 39 240 -22 1928 133 7 27 chr2 179617105 179617406 -73639177 + AluJo SINE Alu 1 295 -17 1886 96 23 82 chr2 179617408 179617735 -73638848 + AluSp SINE Alu 1 309 0 198 224 56 33 chr2 179618741 179618829 -73637754 + MIR SINE MIR 97 145 -63 207 237 0 53 chr2 179619336 179619412 -73637171 + CT-rich Low_complexity Low_complexity 1 72 0 759 128 0 78 chr2 179619631 179619772 -73636811 - AluSg/x SINE Alu -6 306 177 2020 78 4 0 chr2 179619895 179620150 -73636433 + AluSg SINE Alu 50 305 -5 216 218 11 58 chr2 179621824 179621911 -73634672 + C-rich Low_complexity Low_complexity 6 88 0 23 33 0 0 chr2 179622238 179622268 -73634315 + GC_rich Low_complexity Low_complexity 1 30 0 186 43 0 0 chr2 179622270 179622293 -73634290 + (CAG)n Simple_repeat Simple_repeat 3 25 0 28 0 0 0 chr2 179622370 179622398 -73634185 + GC_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr2 179625539 179625571 -73631012 + GC_rich Low_complexity Low_complexity 1 32 0 298 316 6 6 chr2 179625849 179626026 -73630557 + (CA)n Simple_repeat Simple_repeat 1 177 0 598 242 105 32 chr2 179626292 179626482 -73630101 + MIR SINE MIR 46 249 -13 201 188 0 62 chr2 179626448 179626496 -73630087 + L2 LINE L2 3261 3305 -8 * 216 111 0 0 chr2 179627092 179627128 -73629455 + (T)n Simple_repeat Simple_repeat 1 36 0 26 74 0 0 chr2 179629774 179629828 -73626755 + GC_rich Low_complexity Low_complexity 1 54 0 251 260 7 7 chr2 179631162 179631257 -73625326 + T-rich Low_complexity Low_complexity 1 95 0 249 108 0 0 chr2 179635286 179635323 -73621260 + (TAA)n Simple_repeat Simple_repeat 2 38 0 25 0 0 0 chr2 179635609 179635634 -73620949 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr2 179638496 179638517 -73618066 + AT_rich Low_complexity Low_complexity 1 21 0 257 187 33 11 chr2 179638597 179638688 -73617895 + CT-rich Low_complexity Low_complexity 6 98 0 230 263 0 40 chr2 179639970 179640046 -73616537 + C-rich Low_complexity Low_complexity 3 75 0 215 194 0 0 chr2 179642227 179642263 -73614320 + (CA)n Simple_repeat Simple_repeat 2 37 0 31 0 0 0 chr2 179644898 179644929 -73611654 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr2 179646911 179646932 -73609651 + AT_rich Low_complexity Low_complexity 1 21 0 183 80 0 0 chr2 179651282 179651307 -73605276 + (TTC)n Simple_repeat Simple_repeat 2 26 0 281 258 76 26 chr2 179654834 179654980 -73601603 - MIR SINE MIR -62 146 16 1711 191 26 0 chr2 179655484 179655788 -73600795 + AluJo SINE Alu 1 312 0 456 91 0 0 chr2 179655798 179655864 -73600719 + (GGAA)n Simple_repeat Simple_repeat 3 68 0 2035 129 3 0 chr2 179655887 179656174 -73600409 + AluSx SINE Alu 6 293 -19 2116 92 0 34 chr2 179656275 179656593 -73599990 - AluSx SINE Alu 0 308 1 248 188 0 0 chr2 179656600 179656648 -73599935 - L2 LINE L2 -5 3308 3261 24 32 0 0 chr2 179656786 179656817 -73599766 + AT_rich Low_complexity Low_complexity 1 31 0 23 33 0 0 chr2 179659657 179659687 -73596896 + AT_rich Low_complexity Low_complexity 1 30 0 26 64 0 0 chr2 179659788 179659835 -73596748 + AT_rich Low_complexity Low_complexity 1 47 0 1963 98 0 0 chr2 179660058 179660302 -73596281 - AluSx SINE Alu -13 299 56 32 43 0 0 chr2 179660686 179660732 -73595851 + AT_rich Low_complexity Low_complexity 1 46 0 830 246 67 70 chr2 179663783 179664141 -73592442 + L1MC4a LINE L1 5572 5928 -1880 2112 148 0 3 chr2 179664257 179664561 -73592022 - AluJo SINE Alu -9 303 1 2351 77 3 13 chr2 179664612 179664925 -73591658 - AluSg SINE Alu 0 310 1 1341 208 98 22 chr2 179664969 179665286 -73591297 + MER58B DNA MER1_type 1 341 0 229 283 19 0 chr2 179665294 179665347 -73591236 + MER5A DNA MER1_type 1 54 -135 1585 97 0 0 chr2 179665391 179665597 -73590986 + AluSg/x SINE Alu 105 310 0 501 235 42 0 chr2 179665604 179665723 -73590860 + MER5A DNA MER1_type 61 184 -5 692 185 23 39 chr2 179666016 179666146 -73590437 + FLAM_A SINE Alu 3 130 -3 385 263 68 34 chr2 179666249 179666367 -73590216 + MIR3 SINE MIR 3 124 -84 984 98 128 226 chr2 179666452 179666758 -73589825 + AluJo SINE Alu 22 297 -15 592 244 146 0 chr2 179666813 179666977 -73589606 - MIR SINE MIR -16 246 59 304 239 120 70 chr2 179667403 179667545 -73589038 - MIR SINE MIR 0 262 114 258 313 88 14 chr2 179667860 179668007 -73588576 + MIR SINE MIR 95 252 -10 539 264 50 35 chr2 179668069 179668270 -73588313 - L2 LINE L2 -1 3312 3109 259 182 55 0 chr2 179668426 179668481 -73588102 + MIR3 SINE MIR 133 190 -18 2240 78 3 11 chr2 179670145 179670454 -73586129 - AluSc SINE Alu 0 307 1 339 239 0 0 chr2 179675233 179675363 -73581220 + (TA)n Simple_repeat Simple_repeat 2 131 0 1787 171 0 10 chr2 179675424 179675717 -73580866 + AluJb SINE Alu 14 303 -9 21 0 0 0 chr2 179676074 179676095 -73580488 + AT_rich Low_complexity Low_complexity 1 21 0 538 237 132 0 chr2 179676203 179676355 -73580228 + MIR SINE MIR 90 261 -1 2028 144 0 3 chr2 179676961 179677259 -73579324 + AluJb SINE Alu 1 297 -15 226 146 83 0 chr2 179678775 179678823 -73577760 + L1PB2 LINE L1 6043 6094 -57 249 65 0 0 chr2 179678835 179678881 -73577702 - LTR66 LTR ERVL -171 439 394 537 198 0 0 chr2 179678881 179678992 -73577591 + (CA)n Simple_repeat Simple_repeat 2 112 0 2511 62 3 3 chr2 179679114 179679419 -73577164 - AluSp SINE Alu -8 305 1 286 297 205 8 chr2 179679589 179679852 -73576731 - L1MC/D LINE L1 -2154 5654 5340 1795 132 68 0 chr2 179679884 179680173 -73576410 - AluSx SINE Alu 0 307 1 1951 98 9 98 chr2 179680188 179680515 -73576068 - AluSx SINE Alu -14 298 1 1877 150 11 11 chr2 179680693 179680979 -73575604 - AluJo SINE Alu -24 288 3 775 144 0 9 chr2 179681570 179681681 -73574902 + FLAM_A SINE Alu 18 127 -15 227 255 0 0 chr2 179681718 179681769 -73574814 - L1MC4 LINE L1 -1339 6703 6653 270 300 0 25 chr2 179681769 179681849 -73574734 + (CATATA)n Simple_repeat Simple_repeat 1 78 0 238 247 71 24 chr2 179681850 179681935 -73574648 - L1MC4 LINE L1 -1339 6703 6615 423 313 0 0 chr2 179681871 179681918 -73574665 + (TA)n Simple_repeat Simple_repeat 2 48 -132 252 264 22 44 chr2 179681918 179682009 -73574574 + L1MC4 LINE L1 6614 6702 -1340 423 313 0 0 chr2 179682009 179682050 -73574533 + (TA)n Simple_repeat Simple_repeat 47 180 0 231 213 0 0 chr2 179682042 179682089 -73574494 - L1MC4 LINE L1 -1347 6695 6649 * 197 214 36 0 chr2 179682053 179682109 -73574474 + (CATATA)n Simple_repeat Simple_repeat 3 60 0 * 2232 113 3 0 chr2 179682366 179682658 -73573925 + AluSx SINE Alu 1 293 -19 1478 189 19 7 chr2 179683739 179683897 -73572686 - AluJo SINE Alu -19 293 129 2064 151 0 0 chr2 179683897 179684195 -73572388 - AluSx SINE Alu -13 299 2 1478 189 19 7 chr2 179684195 179684306 -73572277 - AluJo SINE Alu -183 129 21 626 289 199 50 chr2 179684630 179685193 -73571390 + L2 LINE L2 2331 2977 -337 257 214 214 22 chr2 179685253 179685342 -73571241 + L2 LINE L2 3158 3263 -50 939 148 7 0 chr2 179686468 179686603 -73569980 + AluJo SINE Alu 1 136 -176 433 46 62 0 chr2 179686655 179686720 -73569863 + L1PA8 LINE L1 6102 6170 -2 185 148 0 0 chr2 179686870 179686897 -73569686 + MIR SINE MIR 72 98 -164 3454 198 46 95 chr2 179687386 179688519 -73568064 - MLT1D-int LTR MaLR -14 1357 281 1363 178 3 92 chr2 179688521 179688858 -73567725 - AluJb SINE Alu 0 309 1 829 135 14 28 chr2 179688858 179688999 -73567584 - FRAM SINE Alu -5 171 33 2267 82 0 7 chr2 179689007 179689298 -73567285 - AluSg SINE Alu -21 289 1 1213 155 24 69 chr2 179689299 179689420 -73567163 - MLT1D-int LTR MaLR -1094 277 152 2172 90 3 14 chr2 179689420 179689731 -73566852 - AluSq SINE Alu 0 308 1 1213 155 24 69 chr2 179689731 179689898 -73566685 - MLT1D-int LTR MaLR -1219 152 1 1354 198 152 14 chr2 179689998 179690412 -73566171 - MLT1D LTR MaLR -34 471 1 2339 97 0 0 chr2 179690434 179690723 -73565860 - AluSx SINE Alu -23 289 1 2326 90 7 0 chr2 179691125 179691414 -73565169 - AluSx SINE Alu -21 291 1 1052 99 0 20 chr2 179691473 179691624 -73564959 - FRAM SINE Alu 0 40 1 612 187 19 0 chr2 179691624 179691731 -73564852 - AluJo/FLAM SINE Alu -203 109 1 1636 189 6 6 chr2 179691755 179692067 -73564516 - AluJo SINE Alu 0 312 1 475 201 62 49 chr2 179692387 179692531 -73564052 + MIR SINE MIR 114 259 -3 944 191 93 9 chr2 179692855 179693080 -73563503 + L1MB8 LINE L1 5926 6169 -9 1889 117 3 52 chr2 179693398 179693707 -73562876 + AluSx SINE Alu 3 296 -16 2153 91 0 17 chr2 179694018 179694315 -73562268 + AluSq SINE Alu 1 292 -21 2258 121 0 0 chr2 179694325 179694632 -73561951 + AluSx SINE Alu 1 307 -5 1889 139 3 41 chr2 179694648 179694964 -73561619 + AluSx SINE Alu 1 304 -8 2588 218 64 32 chr2 179695062 179695326 -73561257 + L1MC4 LINE L1 6786 7040 -1002 1853 116 50 43 chr2 179695326 179695439 -73561144 + AluJo SINE Alu 1 112 -200 2027 119 14 0 chr2 179695439 179695732 -73560851 - AluSx SINE Alu -15 297 1 1853 116 50 43 chr2 179695732 179695919 -73560664 + AluJo SINE Alu 112 303 -9 2588 218 64 32 chr2 179695919 179696545 -73560038 + L1MC4 LINE L1 7040 7704 -338 23 0 0 0 chr2 179696582 179696605 -73559978 + AT_rich Low_complexity Low_complexity 1 23 0 1120 203 91 31 chr2 179696706 179696854 -73559729 + L1MC4 LINE L1 7612 7750 -245 2018 127 7 0 chr2 179696854 179697137 -73559446 + AluSq SINE Alu 1 285 -28 1120 203 91 31 chr2 179697137 179697407 -73559176 + L1MC4 LINE L1 7750 7995 0 2232 106 10 0 chr2 179697479 179697780 -73558803 - AluSx SINE Alu -8 304 1 1667 158 11 14 chr2 179697821 179698136 -73558447 + AluJo SINE Alu 1 314 0 277 287 232 12 chr2 179698247 179698411 -73558172 + MIR SINE MIR 12 211 -51 325 244 92 43 chr2 179699107 179699271 -73557312 - L1MC/D LINE L1 -2061 5747 5576 992 112 15 0 chr2 179699273 179699407 -73557176 + AluSq/x SINE Alu 1 136 -177 1959 118 66 3 chr2 179699407 179699694 -73556889 + AluSx SINE Alu 1 305 -7 5417 109 34 2 chr2 179700673 179701535 -73555048 + L1PA14 LINE L1 5273 6161 0 183 42 0 0 chr2 179702265 179702289 -73554294 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 253 315 207 20 chr2 179702804 179703007 -73553576 - L2 LINE L2 -661 2653 2413 560 125 0 0 chr2 179703019 179703107 -73553476 - AluJ/FLAM SINE Alu -224 88 1 25 83 0 0 chr2 179703290 179703350 -73553233 + AT_rich Low_complexity Low_complexity 1 60 0 2216 112 7 0 chr2 179704141 179704436 -73552147 - AluSq SINE Alu -16 297 1 2246 124 0 6 chr2 179704437 179704751 -73551832 - AluSx SINE Alu 0 312 1 2129 142 0 0 chr2 179705192 179705488 -73551095 - AluSx SINE Alu -14 298 3 240 35 0 0 chr2 179705489 179705518 -73551065 + (TTTTC)n Simple_repeat Simple_repeat 1 29 0 2040 121 4 0 chr2 179705518 179705799 -73550784 - AluSq SINE Alu -31 282 1 1324 189 8 24 chr2 179706272 179706520 -73550063 - AluJo SINE Alu -68 244 1 251 375 80 0 chr2 179706776 179706952 -73549631 - L2 LINE L2 -995 2319 2130 1720 159 60 26 chr2 179706982 179707284 -73549299 + AluJb SINE Alu 1 312 0 384 323 32 75 chr2 179707443 179707742 -73548841 - L2 LINE L2 -227 3045 2759 2247 86 45 0 chr2 179707814 179708104 -73548479 - AluSg SINE Alu -7 303 1 2167 92 10 3 chr2 179708112 179708405 -73548178 - AluY SINE Alu -16 295 1 234 333 0 0 chr2 179708426 179708495 -73548088 + L2 LINE L2 2990 3058 -214 30 27 0 0 chr2 179708576 179708613 -73547970 + AT_rich Low_complexity Low_complexity 1 37 0 610 204 88 0 chr2 179708745 179708882 -73547701 - MIR SINE MIR -107 155 7 2145 138 0 0 chr2 179709460 179709756 -73546827 - AluJb SINE Alu -16 296 1 1708 143 35 51 chr2 179709856 179709992 -73546591 + AluSx SINE Alu 1 138 -174 2187 121 0 0 chr2 179709992 179710297 -73546286 + AluSx SINE Alu 1 305 0 1708 143 35 51 chr2 179710297 179710472 -73546111 + AluSx SINE Alu 138 309 -3 3484 177 50 48 chr2 179710479 179710527 -73546056 + L1MB8 LINE L1 4655 4701 -1477 2243 116 7 0 chr2 179710527 179710829 -73545754 + AluSg SINE Alu 1 304 -6 3484 177 50 48 chr2 179710829 179712178 -73544405 + L1MB8 LINE L1 4701 6064 -114 1672 152 12 0 chr2 179712178 179712428 -73544155 + AluSx SINE Alu 31 283 -29 3484 177 50 48 chr2 179712428 179712538 -73544045 + L1MB8 LINE L1 6064 6172 -6 1408 219 123 23 chr2 179713071 179713608 -73542975 + L1M4c LINE L1 1281 1922 -4460 2562 34 0 0 chr2 179713613 179713905 -73542678 + AluY SINE Alu 1 292 -19 1308 179 118 18 chr2 179713967 179714246 -73542337 + AluSg1 SINE Alu 1 307 -2 959 169 0 52 chr2 179714252 179714424 -73542159 - AluJo SINE Alu -131 181 19 446 210 0 0 chr2 179714571 179714652 -73541931 + FLAM SINE Alu 38 118 -25 1355 219 9 6 chr2 179714686 179715024 -73541559 + L1M4c LINE L1 2622 2960 -3422 658 212 53 35 chr2 179715036 179715206 -73541377 + MER58C DNA MER1_type 1 173 -42 189 0 0 0 chr2 179715218 179715239 -73541344 + (A)n Simple_repeat Simple_repeat 1 21 0 1841 168 3 0 chr2 179715291 179715576 -73541007 + AluJb SINE Alu 1 286 -26 2450 88 0 0 chr2 179715702 179716007 -73540576 - AluY SINE Alu -6 305 1 2353 87 3 0 chr2 179716007 179716306 -73540277 - AluSp SINE Alu -12 301 1 5122 211 55 61 chr2 179716308 179716584 -73539999 + L1M4c LINE L1 3016 3292 -3090 1644 176 56 0 chr2 179716584 179716868 -73539715 + AluSx SINE Alu 1 300 -12 5122 211 55 61 chr2 179716868 179717417 -73539166 + L1M4c LINE L1 3292 3843 -2539 2352 103 0 6 chr2 179717417 179717729 -73538854 + AluSx SINE Alu 1 310 -2 5122 211 55 61 chr2 179717729 179718620 -73537963 + L1M4c LINE L1 3843 4738 -1644 1957 141 20 0 chr2 179718620 179718926 -73537657 - AluJb SINE Alu 0 312 1 5122 211 55 61 chr2 179718926 179718954 -73537629 + L1M4c LINE L1 4738 4765 -1617 1560 162 33 95 chr2 179718954 179719313 -73537270 - MER1B DNA MER1_type 0 337 1 5122 211 55 61 chr2 179719313 179719539 -73537044 + L1M4c LINE L1 4765 4976 -1406 1769 140 15 64 chr2 179720262 179720590 -73535993 + AluJo SINE Alu 1 312 0 28 0 0 0 chr2 179721099 179721127 -73535456 + AT_rich Low_complexity Low_complexity 1 28 0 1031 204 45 19 chr2 179721127 179721391 -73535192 + L1M4c LINE L1 4980 5250 -1132 303 182 30 15 chr2 179721397 179721463 -73535120 + L1ME1 LINE L1 5986 6052 -114 470 103 11 23 chr2 179721476 179721563 -73535020 + L1MB7 LINE L1 6099 6184 0 1849 92 68 0 chr2 179721607 179721858 -73534725 - AluY SINE Alu -9 302 35 1597 159 20 44 chr2 179721866 179722161 -73534422 - AluJo SINE Alu -24 288 1 23 0 0 0 chr2 179725200 179725223 -73531360 + AT_rich Low_complexity Low_complexity 1 23 0 268 205 13 13 chr2 179728789 179728867 -73527716 + (TA)n Simple_repeat Simple_repeat 1 78 0 24 32 0 0 chr2 179729014 179729045 -73527538 + AT_rich Low_complexity Low_complexity 1 31 0 990 113 0 0 chr2 179729304 179729437 -73527146 + AluSq SINE Alu 75 207 -106 2073 182 36 55 chr2 179729538 179729853 -73526730 + L1MA9 LINE L1 5735 6037 -275 1607 167 52 4 chr2 179729853 179730122 -73526461 + AluJo SINE Alu 15 296 -16 2073 182 36 55 chr2 179730122 179730356 -73526227 + L1MA9 LINE L1 6037 6274 -38 24 0 0 0 chr2 179730367 179730391 -73526192 + AT_rich Low_complexity Low_complexity 1 24 0 2184 129 0 0 chr2 179730765 179731074 -73525509 + AluSx SINE Alu 1 309 -3 288 336 0 0 chr2 179832039 179832149 -73424434 + PABL_B-int LTR ERV1 1505 1614 -5062 276 351 29 14 chr2 179832544 179832752 -73423831 + PABL_B-int LTR ERV1 1080 1290 -5832 2134 77 15 0 chr2 179832941 179833215 -73423368 + AluY SINE Alu 22 299 -12 2004 164 11 83 chr2 179833215 179833761 -73422822 - MER61-int LTR ERV1 -4438 2058 632 480 158 0 12 chr2 179833777 179833859 -73422724 - MER61-int LTR ERV1 -885 3995 3915 862 205 27 58 chr2 179833872 179834131 -73422452 - MER61-int LTR ERV1 -440 4777 4527 2178 46 16 23 chr2 179834248 179834552 -73422031 - AluY SINE Alu -9 302 1 2478 103 64 2 chr2 179834554 179834963 -73421620 + LTR56 LTR ERV1 12 445 0 1948 132 44 0 chr2 179837165 179837460 -73419123 - AluSx SINE Alu -4 308 1 222 267 27 27 chr2 179837468 179837543 -73419040 - L3b LINE CR1 -117 1466 1392 386 262 90 7 chr2 179838950 179839095 -73417488 + MIR SINE MIR 104 260 -2 189 327 0 0 chr2 179839099 179839154 -73417429 - L2 LINE L2 -6 3266 3212 373 365 0 0 chr2 179839901 179840079 -73416504 + G-rich Low_complexity Low_complexity 1 178 0 183 80 0 0 chr2 179840151 179840176 -73416407 + (A)n Simple_repeat Simple_repeat 1 25 0 666 274 34 38 chr2 179840330 179840596 -73415987 - MLT1J LTR MaLR -244 267 3 23 0 0 0 chr2 179840767 179840790 -73415793 + AT_rich Low_complexity Low_complexity 1 23 0 299 275 12 12 chr2 179840984 179841064 -73415519 - L2 LINE L2 -1 3271 3192 861 134 7 21 chr2 179841394 179841536 -73415047 - AluSg/x SINE Alu -13 297 158 289 235 0 49 chr2 179842171 179842252 -73414331 - MIR SINE MIR -117 145 69 3450 73 15 33 chr2 179843312 179843612 -73412971 + MER41A LTR ERV1 83 387 -167 1867 105 0 36 chr2 179843612 179843917 -73412666 + AluSc SINE Alu 1 294 -15 1800 154 3 3 chr2 179843927 179844213 -73412370 + AluSx SINE Alu 14 299 -13 3450 73 15 33 chr2 179844213 179844382 -73412201 + MER41A LTR ERV1 396 554 0 3913 93 4 4 chr2 179844438 179844973 -73411610 - L1PA13 LINE L1 -2 6161 5627 917 137 7 0 chr2 179845686 179845825 -73410758 + LTR27-int LTR ERV1 6951 7090 -1 2612 198 20 56 chr2 179845828 179846485 -73410098 + LTR27 LTR ERV1 4 636 0 2724 105 93 0 chr2 179846597 179847007 -73409576 + LTR7 LTR ERV1 1 448 -2 2634 117 71 41 chr2 179847100 179847121 -73409462 + MER4D LTR ERV1 1 20 -883 1992 130 11 0 chr2 179847121 179847406 -73409177 + AluSx SINE Alu 1 288 -24 2634 117 71 41 chr2 179847406 179847846 -73408737 + MER4D LTR ERV1 20 476 -427 380 115 0 0 chr2 179847848 179847900 -73408683 + Alu SINE Alu 1 52 -247 5317 105 20 5 chr2 179847905 179848657 -73407926 - MER4E LTR ERV1 -16 763 1 3364 155 36 63 chr2 179848658 179849323 -73407260 + MER4D LTR ERV1 257 903 0 290 137 0 0 chr2 179849323 179849374 -73407209 + MER93b LTR ERV1 323 373 0 1209 208 4 21 chr2 179850368 179850609 -73405974 - MER8 DNA MER2_type -1 238 2 395 240 41 75 chr2 179850816 179850921 -73405662 - MIR SINE MIR -38 224 124 2290 89 7 0 chr2 179850921 179851212 -73405371 + AluSg SINE Alu 1 293 -17 395 240 41 75 chr2 179851212 179851252 -73405331 - MIR SINE MIR -138 124 84 328 269 0 69 chr2 179852147 179852277 -73404306 - MIR SINE MIR -40 222 102 1172 155 19 19 chr2 179852386 179852599 -73403984 - AluSq SINE Alu -100 213 1 1970 140 55 0 chr2 179852613 179852906 -73403677 - AluSx SINE Alu -3 309 1 1739 167 0 50 chr2 179854571 179854870 -73401713 + AluJo SINE Alu 1 284 -28 277 253 0 63 chr2 179854950 179855045 -73401538 - MIR3 SINE MIR -11 197 109 1959 325 70 44 chr2 179855841 179857218 -73399365 + PABL_B-int LTR ERV1 2877 4288 -2834 2051 100 7 10 chr2 179857754 179858044 -73398539 - AluSq SINE Alu -24 289 1 1786 141 3 72 chr2 179858833 179859152 -73397431 - AluSx SINE Alu -15 297 1 23 0 0 0 chr2 179859448 179859471 -73397112 + AT_rich Low_complexity Low_complexity 1 23 0 1761 207 114 13 chr2 179860397 179860852 -73395731 - Charlie4a DNA MER1_type -7 501 1 396 319 0 0 chr2 179861380 179861540 -73395043 + C-rich Low_complexity Low_complexity 1 160 0 3491 78 0 0 chr2 179861770 179862220 -73394363 + L1PA7 LINE L1 5705 6154 0 10528 132 25 22 chr2 179862256 179864003 -73392580 + PABL_B-int LTR ERV1 2242 3993 -1224 299 177 0 32 chr2 179864006 179864068 -73392515 + PABL_B-int LTR ERV1 4918 4977 -240 1160 115 11 33 chr2 179864068 179864251 -73392332 - AluSg/x SINE Alu -14 298 120 4390 135 42 6 chr2 179864443 179865162 -73391421 - L1PA16 LINE L1 -2 6164 5420 509 82 41 14 chr2 179865398 179865471 -73391112 + MLT1A1 LTR MaLR 1 75 -290 976 199 15 31 chr2 179865472 179865668 -73390915 + AluJb SINE Alu 102 294 -18 1226 108 0 0 chr2 179865806 179865963 -73390620 + AluSx SINE Alu 1 157 -155 20569 45 3 6 chr2 179867616 179870688 -73385895 - L1PA5 LINE L1 -250 5904 2845 1055 253 30 15 chr2 179870745 179871287 -73385296 - HUERS-P1 LTR ERV1 -5549 714 1 312 294 42 21 chr2 179871287 179871430 -73385153 - LTR8 LTR ERV1 0 691 546 1981 249 59 25 chr2 179871684 179872211 -73384372 - MLT1H1 LTR MaLR -10 545 1 2432 89 0 6 chr2 179872461 179872774 -73383809 - AluSx SINE Alu -1 311 1 1402 236 20 23 chr2 179874274 179874622 -73381961 - MER87 LTR ERV1 -1 540 194 5779 148 65 52 chr2 179875953 179876164 -73380419 - MER57-int LTR ERV1 -2071 4925 4718 1752 165 20 10 chr2 179876164 179876461 -73380122 + AluSx SINE Alu 1 300 -12 5779 148 65 52 chr2 179876461 179876529 -73380054 - MER57-int LTR ERV1 -2278 4718 4652 2153 114 0 17 chr2 179876529 179876826 -73379757 - AluSx SINE Alu -16 296 5 5779 148 65 52 chr2 179876826 179877646 -73378937 - MER57-int LTR ERV1 -2344 4652 3844 1929 160 0 0 chr2 179877646 179877939 -73378644 - AluSx SINE Alu -15 297 5 5779 148 65 52 chr2 179877939 179878341 -73378242 - MER57-int LTR ERV1 -3152 3844 3449 1775 168 39 3 chr2 179878341 179878626 -73377957 - AluSx SINE Alu -17 295 1 5779 148 65 52 chr2 179878626 179878882 -73377701 - MER57-int LTR ERV1 -3547 3449 2357 478 41 27 0 chr2 179878883 179878956 -73377627 + (TTTA)n Simple_repeat Simple_repeat 3 77 0 2778 23 7 0 chr2 179878956 179879259 -73377324 - SVA Other Other -23 1363 1059 32 26 0 0 chr2 179879776 179879815 -73376768 + AT_rich Low_complexity Low_complexity 1 39 0 233 257 71 57 chr2 179881332 179881472 -73375111 - L2 LINE L2 -23 3290 3149 191 293 0 17 chr2 179881585 179881643 -73374940 - L2 LINE L2 -88 3225 3169 337 321 107 0 chr2 179881826 179881966 -73374617 - L2 LINE L2 -200 3072 2918 209 255 20 0 chr2 179882115 179882166 -73374417 + (CACG)n Simple_repeat Simple_repeat 1 52 0 1840 131 43 7 chr2 179882484 179882766 -73373817 + AluSx SINE Alu 1 292 -20 430 310 153 31 chr2 179882778 179883104 -73373479 + MLT1K LTR MaLR 5 370 -218 511 177 53 26 chr2 179883131 179883244 -73373339 + MLT1K LTR MaLR 470 585 -3 263 231 188 0 chr2 179883512 179883629 -73372954 - L2 LINE L2 0 3272 3134 450 233 157 38 chr2 179884928 179885087 -73371496 + MER5B DNA MER1_type 1 178 0 410 255 122 21 chr2 179885505 179885671 -73370912 + MER5A DNA MER1_type 4 188 -1 208 143 0 0 chr2 179886606 179886641 -73369942 + (T)n Simple_repeat Simple_repeat 1 35 0 1300 62 0 0 chr2 179886641 179886803 -73369780 - L1PA3 LINE L1 0 6155 5994 243 179 24 48 chr2 179886806 179886890 -73369693 + C-rich Low_complexity Low_complexity 4 85 0 21 36 0 0 chr2 179886979 179887007 -73369576 + GC_rich Low_complexity Low_complexity 1 28 0 605 150 19 99 chr2 179887945 179888021 -73368562 + MSTC LTR MaLR 4 85 -311 2444 87 0 0 chr2 179888021 179888321 -73368262 - AluY SINE Alu -11 300 1 605 150 19 99 chr2 179888321 179888425 -73368158 + MSTC LTR MaLR 85 173 -223 21 89 0 0 chr2 179888579 179888635 -73367948 + AT_rich Low_complexity Low_complexity 1 56 0 285 252 168 42 chr2 179889401 179889544 -73367039 - MIR3 SINE MIR -15 193 33 5092 214 64 60 chr2 179890337 179891712 -73364871 - LTR27-int LTR ERV1 -5710 1381 1 2180 216 19 76 chr2 179891715 179892387 -73364196 - LTR27 LTR ERV1 0 636 3 304 328 141 16 chr2 179892457 179892649 -73363934 - MLT1K LTR MaLR -165 423 208 372 22 0 0 chr2 179892675 179892720 -73363863 + (CA)n Simple_repeat Simple_repeat 1 45 0 2462 189 64 8 chr2 179892987 179893489 -73363094 - MER34C LTR ERV1 -54 531 2 1929 137 22 0 chr2 179893496 179893823 -73362760 - AluSg SINE Alu 0 333 1 849 186 6 35 chr2 179894282 179894311 -73362272 + LTR8 LTR ERV1 1 29 -662 2046 130 3 7 chr2 179894311 179894596 -73361987 + AluSx SINE Alu 9 292 -20 849 186 6 35 chr2 179894596 179894738 -73361845 + LTR8 LTR ERV1 29 167 -524 225 336 0 0 chr2 179895213 179895341 -73361242 + (CA)n Simple_repeat Simple_repeat 2 129 0 * 396 283 0 0 chr2 179895333 179895478 -73361105 + (TA)n Simple_repeat Simple_repeat 2 146 0 342 264 0 0 chr2 179895512 179895618 -73360965 + (TA)n Simple_repeat Simple_repeat 1 106 0 1492 180 58 17 chr2 179895618 179895785 -73360798 - AluJb SINE Alu -5 307 121 186 43 0 0 chr2 179895785 179895808 -73360775 + (TTTG)n Simple_repeat Simple_repeat 3 25 0 1492 180 58 17 chr2 179895808 179895935 -73360648 - AluJb SINE Alu -191 121 1 1501 158 0 54 chr2 179895944 179896223 -73360360 - AluJb SINE Alu -4 308 45 188 350 49 39 chr2 179897289 179897492 -73359091 - L3 LINE CR1 -824 753 549 564 350 9 0 chr2 179897611 179897828 -73358755 + MIR SINE MIR 24 242 -20 1938 123 87 3 chr2 179897968 179898326 -73358257 - L1MA5A LINE L1 -2 6295 5908 220 275 202 18 chr2 179901089 179901198 -73355385 - MIR3 SINE MIR -50 158 30 503 115 35 0 chr2 179901763 179901850 -73354733 - L1MB2 LINE L1 -7 6164 6075 887 191 0 22 chr2 179902785 179902963 -73353620 + FRAM SINE Alu 3 176 0 208 316 126 0 chr2 179903123 179903218 -73353365 - MIR3 SINE MIR -51 157 51 207 174 0 116 chr2 179904021 179904090 -73352493 + L2 LINE L2 3184 3244 -28 542 261 197 39 chr2 179904340 179904776 -73351807 - L1MC4a LINE L1 -1630 6178 5674 2028 137 3 3 chr2 179905150 179905449 -73351134 - AluJb SINE Alu -13 299 1 1082 146 15 131 chr2 179905778 179906045 -73350538 + MER46A DNA MER2_type 1 236 0 1594 137 18 28 chr2 179906337 179906646 -73349937 - AluSx SINE Alu 0 306 1 22 35 0 0 chr2 179906719 179906748 -73349835 + AT_rich Low_complexity Low_complexity 1 29 0 2022 70 6 51 chr2 179906748 179907062 -73349521 + AluY SINE Alu 1 300 -11 371 219 25 38 chr2 179907131 179907291 -73349292 + C-rich Low_complexity Low_complexity 6 163 0 357 140 0 0 chr2 179907430 179907487 -73349096 - MIR3 SINE MIR -40 168 112 250 233 111 44 chr2 179908586 179908676 -73347907 + L2 LINE L2 3141 3236 -36 347 299 79 0 chr2 179909617 179909744 -73346839 + MIR SINE MIR 3 139 -123 294 29 0 0 chr2 179911252 179911287 -73345296 + (TG)n Simple_repeat Simple_repeat 1 35 0 1760 177 3 16 chr2 179911838 179912154 -73344429 - AluJb SINE Alu 0 312 1 266 213 102 19 chr2 179915128 179915236 -73341347 - HAL1 LINE L1 -130 2377 2261 798 294 184 30 chr2 179915968 179916214 -73340369 - HAL1 LINE L1 -773 1734 1527 1656 134 52 58 chr2 179916214 179916505 -73340078 - AluSx SINE Alu -19 293 5 798 294 184 30 chr2 179916505 179917031 -73339552 - HAL1 LINE L1 -980 1527 843 915 190 18 0 chr2 179917320 179917483 -73339100 + AluSg/x SINE Alu 134 299 -13 2115 127 0 3 chr2 179918407 179918706 -73337877 - AluSx SINE Alu -6 306 9 26 0 0 0 chr2 179918723 179918749 -73337834 + AT_rich Low_complexity Low_complexity 1 26 0 286 324 27 9 chr2 179920055 179920166 -73336417 + L2 LINE L2 3191 3303 -10 681 192 141 90 chr2 179920312 179920497 -73336086 - MLT1D LTR MaLR -7 498 297 764 158 0 0 chr2 179920497 179920624 -73335959 - L1PA14 LINE L1 -1 6160 6034 681 192 141 90 chr2 179920624 179920672 -73335911 - MLT1D LTR MaLR -208 297 253 444 265 0 77 chr2 179920715 179920885 -73335698 - MLT1D LTR MaLR -469 157 1 313 316 143 29 chr2 179921011 179921171 -73335412 + L2 LINE L2 2850 2990 -323 1914 107 4 0 chr2 179921171 179921433 -73335150 + AluSc SINE Alu 47 309 0 313 316 143 29 chr2 179921433 179921684 -73334899 + L2 LINE L2 2990 3308 -5 267 171 0 0 chr2 179921839 179921880 -73334703 + MLT1D LTR MaLR 126 166 -339 1954 129 25 3 chr2 179921976 179922262 -73334321 - AluJb SINE Alu -20 292 1 198 139 0 23 chr2 179922416 179922459 -73334124 - L2 LINE L2 0 3272 3231 499 218 189 24 chr2 179923798 179924004 -73332579 + L2 LINE L2 2137 2376 -938 2198 90 35 0 chr2 179924028 179924316 -73332267 - AluSx SINE Alu -14 298 1 1171 143 0 0 chr2 179924340 179924508 -73332075 - AluSx SINE Alu -18 292 125 501 149 37 0 chr2 179924535 179924696 -73331887 + (TA)n Simple_repeat Simple_repeat 2 168 0 947 132 0 0 chr2 179924705 179924834 -73331749 - AluSx SINE Alu -183 129 1 500 265 58 136 chr2 179924836 179925563 -73331020 + L2 LINE L2 2396 3028 -285 1950 118 89 0 chr2 179925563 179925843 -73330740 - AluSp SINE Alu -8 305 1 500 265 58 136 chr2 179925843 179926091 -73330492 + L2 LINE L2 3028 3294 -19 503 255 70 6 chr2 179927009 179927166 -73329417 - MIR SINE MIR -84 178 12 1822 141 36 0 chr2 179928483 179928759 -73327824 - AluJo SINE Alu -25 287 2 302 319 0 0 chr2 179929413 179929504 -73327079 - L1MC4 LINE L1 -1340 6702 6612 24 32 0 0 chr2 179932895 179932926 -73323657 + AT_rich Low_complexity Low_complexity 1 31 0 28 48 0 0 chr2 179932985 179933027 -73323556 + AT_rich Low_complexity Low_complexity 1 42 0 497 286 42 21 chr2 179935322 179935511 -73321072 - MER3 DNA MER1_type -12 197 5 324 214 0 56 chr2 179935876 179935965 -73320618 - MIR3 SINE MIR -42 166 83 1785 156 21 17 chr2 179936125 179936414 -73320169 + AluJo SINE Alu 1 290 -22 487 205 211 6 chr2 179936821 179936987 -73319596 - MER46C DNA MER2_type -137 201 2 1866 112 27 14 chr2 179938159 179938453 -73318130 + AluSq SINE Alu 1 298 -15 509 271 28 34 chr2 179938518 179938695 -73317888 + MER5B DNA MER1_type 2 177 -1 335 270 96 0 chr2 179938851 179938966 -73317617 + MIR SINE MIR 19 144 -118 2058 100 3 70 chr2 179938983 179939314 -73317269 - AluSq SINE Alu -1 312 4 281 263 53 0 chr2 179939397 179939473 -73317110 - MIR3 SINE MIR -5 203 124 471 273 175 0 chr2 179940220 179940374 -73316209 - MER5A DNA MER1_type 0 189 9 382 262 84 0 chr2 179940381 179940488 -73316095 + MIR SINE MIR 28 143 -119 1882 156 3 25 chr2 179941134 179941448 -73315135 - AluSx SINE Alu -5 307 1 1574 146 97 11 chr2 179941669 179942112 -73314471 + MER72 LTR ERV1 1 703 -19 598 128 11 21 chr2 179942112 179942206 -73314377 - LTR8 LTR ERV1 0 691 599 3213 97 53 32 chr2 179942211 179942685 -73313898 + LTR22B LTR ERVK 5 488 -4 4484 135 35 26 chr2 179942690 179943422 -73313161 + HERVK22 LTR ERVK 3 741 -6096 780 176 59 0 chr2 179943843 179943979 -73312604 + HERVK22 LTR ERVK 2327 2470 -4367 212 0 36 0 chr2 179944000 179944028 -73312555 + (CAAAAA)n Simple_repeat Simple_repeat 3 31 0 374 153 0 0 chr2 179944028 179944087 -73312496 + HERVK22 LTR ERVK 2849 2907 -3930 * 31496 108 6 3 chr2 179944079 179948412 -73308171 + HERVK22 LTR ERVK 2493 6837 0 2839 123 77 30 chr2 179948412 179948882 -73307701 + LTR22B LTR ERVK 1 492 0 803 232 71 77 chr2 179948901 179949241 -73307342 - LTR8A LTR ERV1 -101 626 289 381 324 53 32 chr2 179949243 179949527 -73307056 - HERV17 LTR ERV1 -2272 6354 6065 250 245 88 29 chr2 179949987 179950089 -73306494 - L1MC5 LINE L1 -47 7914 7807 1451 167 54 31 chr2 179950184 179950478 -73306105 - AluJb SINE Alu -11 301 1 1634 162 0 4 chr2 179953178 179953444 -73303139 - AluJo SINE Alu -12 300 36 225 387 116 11 chr2 179953538 179953719 -73302864 + L3 LINE CR1 32 231 -1346 261 297 63 27 chr2 179953886 179953997 -73302586 + MIR SINE MIR 21 135 -73 227 294 110 14 chr2 179954094 179954240 -73302343 + MIR SINE MIR 96 255 -7 1977 141 10 7 chr2 179954497 179954801 -73301782 + AluJo SINE Alu 1 305 -7 933 310 116 48 chr2 179955081 179955859 -73300724 + L3 LINE CR1 595 1425 -152 273 331 107 0 chr2 179956951 179957072 -73299511 + L2 LINE L2 3137 3270 -2 588 318 31 8 chr2 179957365 179957620 -73298963 + MIR SINE MIR 2 262 0 451 290 107 12 chr2 179960898 179961067 -73295516 + MIR SINE MIR 2 186 -76 457 173 36 36 chr2 179961102 179961212 -73295371 - MIR SINE MIR -53 209 100 2063 133 3 0 chr2 179961707 179962008 -73294575 - AluSq SINE Alu -8 305 4 326 264 201 14 chr2 179963553 179963697 -73292886 + MER5A DNA MER1_type 19 189 0 2105 137 7 0 chr2 179963799 179964105 -73292478 + AluSq SINE Alu 5 312 -1 436 315 79 33 chr2 179964727 179964968 -73291615 + L2 LINE L2 2985 3236 -36 363 97 16 16 chr2 179966328 179966390 -73290193 + L1MA3 LINE L1 6244 6305 0 200 333 76 35 chr2 179966445 179966616 -73289967 - MIR SINE MIR -50 212 35 236 77 31 62 chr2 179966754 179966819 -73289764 + (CCA)n Simple_repeat Simple_repeat 3 65 0 29 47 0 0 chr2 179967881 179967924 -73288659 + AT_rich Low_complexity Low_complexity 1 43 0 634 303 136 10 chr2 179967947 179968257 -73288326 - L1MC4a LINE L1 -1908 5900 5552 317 223 78 59 chr2 179969317 179969475 -73287108 + MIR SINE MIR 16 177 -60 22 56 0 0 chr2 179969773 179969809 -73286774 + AT_rich Low_complexity Low_complexity 1 36 0 609 281 96 43 chr2 179969904 179970299 -73286284 + L1ME4a LINE L1 5524 5939 -182 2144 74 44 30 chr2 179971715 179972011 -73284572 - AluSp SINE Alu -12 301 2 1800 167 3 7 chr2 179975057 179975344 -73281239 - AluJb SINE Alu -26 286 1 1774 112 0 0 chr2 179979624 179979848 -73276735 - AluSx SINE Alu -88 224 1 242 299 80 7 chr2 179980944 179981081 -73275502 + L1ME4a LINE L1 5971 6117 -4 2171 126 0 3 chr2 179981090 179981384 -73275199 - AluSx SINE Alu -19 293 1 356 176 0 0 chr2 179982779 179982847 -73273736 - L1MA9 LINE L1 -4 6308 6241 224 250 0 0 chr2 179983501 179983545 -73273038 - L3b LINE CR1 -251 1332 1289 196 197 15 15 chr2 179983711 179983777 -73272806 + (TA)n Simple_repeat Simple_repeat 2 67 0 337 246 0 0 chr2 179983777 179983838 -73272745 + Tigger5 DNA MER2_type 2 62 -2261 1181 129 6 0 chr2 179983860 179984031 -73272552 + Tigger5 DNA MER2_type 2086 2257 -66 578 141 0 0 chr2 179984029 179984114 -73272469 - Tigger5 DNA MER2_type -33 2290 2206 * 477 275 35 71 chr2 179984136 179984331 -73272252 - MIR SINE MIR -56 206 21 189 318 91 45 chr2 179984416 179984592 -73271991 + L2 LINE L2 3087 3270 -2 2183 122 0 10 chr2 179984829 179985140 -73271443 + AluSx SINE Alu 1 308 -4 257 326 14 58 chr2 179986456 179986594 -73269989 + L2 LINE L2 2833 2964 -349 2449 85 3 0 chr2 179986630 179986937 -73269646 - AluSp SINE Alu -5 308 1 374 372 62 0 chr2 179988203 179988332 -73268251 + L2 LINE L2 3136 3272 0 2189 242 44 27 chr2 180039903 180041414 -73215169 - L1M4c LINE L1 -3266 3378 1739 * 3553 194 129 71 chr2 180041401 180042775 -73213808 - L1M4c LINE L1 -5086 1456 2 319 254 263 13 chr2 180042887 180043340 -73213243 - HAL1 LINE L1 -1071 1436 871 2500 162 53 36 chr2 180043753 180044268 -73212315 + L1MB7 LINE L1 5618 6144 -40 2151 109 7 0 chr2 180044268 180044562 -73212021 - AluSx SINE Alu -16 296 1 2500 162 53 36 chr2 180044562 180044594 -73211989 + L1MB7 LINE L1 6144 6174 -10 2004 164 0 3 chr2 180045075 180045385 -73211198 - AluSx SINE Alu -3 309 1 1610 105 18 13 chr2 180046454 180046682 -73209901 - AluSg/x SINE Alu 0 310 82 1784 159 87 10 chr2 180046985 180047376 -73209207 + LTR37A LTR ERV1 1 421 -5 475 235 75 21 chr2 180047382 180047569 -73209014 - LTR33 LTR ERVL -2 519 323 1199 180 161 28 chr2 180047856 180048009 -73208574 - MLT1A1 LTR MaLR 0 365 234 2475 197 44 93 chr2 180048009 180048492 -73208091 - LTR8 LTR ERV1 0 691 254 1536 160 74 4 chr2 180048492 180048761 -73207822 - AluJo SINE Alu -24 288 1 2475 197 44 93 chr2 180048761 180049004 -73207579 - LTR8 LTR ERV1 -437 254 1 1199 180 161 28 chr2 180049004 180049172 -73207411 - MLT1A1 LTR MaLR -131 234 1 551 94 31 10 chr2 180049979 180050075 -73206508 + MER4A LTR ERV1 1 98 -566 1416 135 51 26 chr2 180050075 180050412 -73206171 + MER4A LTR ERV1 261 664 0 381 274 143 23 chr2 180050611 180050786 -73205797 - MIR SINE MIR 0 262 67 27 29 0 0 chr2 180051514 180051548 -73205035 + GC_rich Low_complexity Low_complexity 1 34 0 324 0 0 0 chr2 180052939 180052975 -73203608 + (TG)n Simple_repeat Simple_repeat 2 37 0 833 88 40 40 chr2 180052976 180053101 -73203482 - FLAM_C SINE Alu -6 127 3 1509 174 84 0 chr2 180053183 180053458 -73203125 - AluJo SINE Alu -14 298 1 809 50 0 0 chr2 180053481 180053580 -73203003 - HY3 scRNA scRNA -1 100 2 2272 75 0 0 chr2 180054272 180054575 -73202008 - AluSg SINE Alu 0 303 1 187 277 92 0 chr2 180054794 180054859 -73201724 - MIR SINE MIR -56 206 136 2274 115 0 3 chr2 180054872 180055177 -73201406 - AluSx SINE Alu -8 304 1 1585 179 17 21 chr2 180055183 180055473 -73201110 - AluJb SINE Alu -23 289 1 1608 167 20 33 chr2 180055495 180055795 -73200788 - AluJo SINE Alu -15 297 2 342 267 147 0 chr2 180055807 180055923 -73200660 - MIR SINE MIR -125 137 5 244 243 186 0 chr2 180057152 180057222 -73199361 - MIR SINE MIR -114 148 66 21 0 0 0 chr2 180057261 180057282 -73199301 + AT_rich Low_complexity Low_complexity 1 21 0 602 275 51 17 chr2 180057861 180058097 -73198486 - Charlie8 DNA MER1_type -2137 280 37 277 236 281 0 chr2 180058438 180058527 -73198056 - MIR SINE MIR -144 118 5 560 267 6 12 chr2 180058698 180058870 -73197713 + MARNA DNA Mariner 397 567 -19 2336 85 3 3 chr2 180058880 180059175 -73197408 + AluSp SINE Alu 1 295 -18 1686 124 89 0 chr2 180060627 180060857 -73195726 - AluSg SINE Alu 0 303 44 207 0 0 0 chr2 180060857 180060880 -73195703 + (CCTG)n Simple_repeat Simple_repeat 2 24 0 1686 124 89 0 chr2 180060880 180060929 -73195654 - AluSg SINE Alu -259 44 1 238 217 9 85 chr2 180061194 180061300 -73195283 - L1ME LINE L1 -374 5788 5691 2209 100 13 7 chr2 180061601 180061902 -73194681 + AluSx SINE Alu 1 303 -9 656 160 80 16 chr2 180061912 180062037 -73194546 + FLAM_C SINE Alu 1 133 0 2333 85 13 3 chr2 180063380 180063686 -73192897 + AluSg SINE Alu 1 309 -1 756 217 104 32 chr2 180064319 180064540 -73192043 + MIR SINE MIR 12 248 -14 619 177 89 8 chr2 180065042 180065166 -73191417 - AluJo SINE Alu -178 134 1 31 0 0 0 chr2 180066470 180066501 -73190082 + AT_rich Low_complexity Low_complexity 1 31 0 318 172 248 55 chr2 180066524 180066674 -73189909 - MIR SINE MIR -62 146 16 1416 178 0 29 chr2 180066726 180067001 -73189582 - AluJo SINE Alu -45 267 1 28 48 0 0 chr2 180067029 180067071 -73189512 + AT_rich Low_complexity Low_complexity 1 42 0 2159 95 13 13 chr2 180067154 180067459 -73189124 - AluSg SINE Alu -5 305 1 2034 139 3 3 chr2 180067808 180068110 -73188473 + AluSx SINE Alu 2 303 -9 3251 174 62 0 chr2 180068116 180068825 -73187758 - L1MB7 LINE L1 -158 6026 5274 228 294 0 0 chr2 180068873 180068958 -73187625 - L1MC4 LINE L1 -1339 6703 6619 198 193 24 12 chr2 180068963 180069046 -73187537 + (TA)n Simple_repeat Simple_repeat 1 84 0 424 182 30 0 chr2 180069048 180069147 -73187436 - L1MB7 LINE L1 -884 5262 5161 950 133 0 21 chr2 180069150 180069293 -73187290 - FLAM_C SINE Alu -3 140 1 330 230 71 9 chr2 180069294 180069407 -73187176 - L1MB7 LINE L1 -981 5165 5046 1843 168 16 10 chr2 180069864 180070174 -73186409 - AluSx SINE Alu 0 312 1 468 266 98 0 chr2 180071036 180071220 -73185363 - L1ME LINE L1 -305 5816 5615 1800 153 0 62 chr2 180071227 180071547 -73185036 - AluJo SINE Alu -8 304 5 1713 194 0 13 chr2 180071565 180071880 -73184703 - AluJo SINE Alu -1 311 1 2108 137 0 0 chr2 180071898 180072190 -73184393 - AluSx SINE Alu -3 309 18 2296 89 20 0 chr2 180072465 180072757 -73183826 + AluY SINE Alu 1 298 -13 750 65 156 2 chr2 180073709 180073836 -73182747 - LTR12 LTR ERV1 0 714 155 4742 118 78 27 chr2 180073836 180074622 -73181961 - LTR12 LTR ERV1 0 826 1 619 287 134 9 chr2 180075090 180075313 -73181270 + MIR SINE MIR 9 259 -3 527 288 35 49 chr2 180075410 180075994 -73180589 - MERVL LTR ERVL -1363 4122 3503 355 283 142 19 chr2 180076018 180076223 -73180360 - LTR33 LTR ERVL 0 521 292 351 237 188 5 chr2 180076252 180076438 -73180145 - LTR33 LTR ERVL -287 234 15 4936 66 79 2 chr2 180077073 180077709 -73178874 - LTR12 LTR ERV1 -2 686 2 5511 89 1 1 chr2 180077710 180078484 -73178099 - HERV9 LTR ERV1 0 8399 7626 2220 148 108 96 chr2 180078482 180079372 -73177211 - Harlequin LTR ERV1 -5156 1740 840 * 299 62 21 0 chr2 180079382 180079430 -73177153 + LTR12 LTR ERV1 666 714 0 27 0 0 0 chr2 180079582 180079609 -73176974 + AT_rich Low_complexity Low_complexity 1 27 0 2150 96 44 7 chr2 180080823 180081116 -73175467 - AluSx SINE Alu -8 304 1 1356 102 83 19 chr2 180081160 180081376 -73175207 + MER30 DNA MER1_type 1 230 0 21 82 0 0 chr2 180081830 180081879 -73174704 + AT_rich Low_complexity Low_complexity 1 49 0 1717 188 3 3 chr2 180081879 180082161 -73174422 - AluJo SINE Alu -30 282 1 467 309 0 40 chr2 180083537 180083689 -73172894 + MER5A DNA MER1_type 43 188 -1 1887 184 3 0 chr2 180083888 180084197 -73172386 - AluJo SINE Alu -2 310 1 3238 115 48 8 chr2 180087287 180087802 -73168781 - LTR19C LTR ERV1 0 779 244 710 88 88 0 chr2 180087791 180087905 -73168678 - LTR19C LTR ERV1 -655 124 1 * 1416 156 133 30 chr2 180088142 180088481 -73168102 + THE1C LTR MaLR 1 374 -1 329 319 160 37 chr2 180088600 180088976 -73167607 + L1M4 LINE L1 3257 3678 -2468 465 285 72 10 chr2 180088988 180089195 -73167388 + L1M4 LINE L1 3698 3917 -2229 628 179 160 0 chr2 180089819 180089951 -73166632 - MER5A DNA MER1_type -29 160 4 515 195 93 144 chr2 180090763 180090890 -73165693 - L1M4 LINE L1 -1515 4631 4499 1514 145 114 16 chr2 180090890 180091145 -73165438 - AluSx SINE Alu -32 280 1 515 195 93 144 chr2 180091145 180091330 -73165253 - L1M4 LINE L1 -1647 4499 4335 2144 128 7 0 chr2 180092160 180092466 -73164117 - AluSq SINE Alu -5 308 1 25 0 0 0 chr2 180093521 180093546 -73163037 + AT_rich Low_complexity Low_complexity 1 25 0 947 126 35 0 chr2 180093558 180093701 -73162882 - L1MB5 LINE L1 -15 6159 6012 888 188 24 12 chr2 180093921 180094091 -73162492 + AluJo SINE Alu 122 293 -19 279 286 0 0 chr2 180095536 180095599 -73160984 - L2 LINE L2 -1 3312 3250 2171 116 20 0 chr2 180096610 180096913 -73159670 - AluSq SINE Alu -4 309 1 488 250 79 57 chr2 180097214 180097402 -73159181 + LTR33A LTR ERVL 300 480 -43 2264 106 0 3 chr2 180097402 180097703 -73158880 - AluSx SINE Alu -12 300 1 488 250 79 57 chr2 180097703 180097749 -73158834 + LTR33A LTR ERVL 480 523 0 1629 206 55 66 chr2 180098096 180098644 -73157939 + L1M4 LINE L1 3410 3951 -2195 272 237 66 0 chr2 180099132 180099208 -73157375 + MIR SINE MIR 180 260 -2 2135 94 28 3 chr2 180099465 180099751 -73156832 - AluSq SINE Alu -20 293 1 402 314 152 21 chr2 180099798 180100180 -73156403 - LTR16A LTR ERVL -9 441 10 906 179 26 13 chr2 180100254 180100405 -73156178 - FRAM SINE Alu -10 156 4 5888 126 159 25 chr2 180100526 180101624 -73154959 + MER52C LTR ERV1 34 1278 0 921 217 22 0 chr2 180101816 180101996 -73154587 + LTR28 LTR ERV1 837 1020 0 2378 89 3 0 chr2 180102133 180102426 -73154157 + AluSp SINE Alu 1 294 -19 227 229 0 0 chr2 180102692 180102740 -73153843 - L2 LINE L2 -3 3269 3222 832 279 159 10 chr2 180102740 180103271 -73153312 + L1ME3A LINE L1 5322 5939 -231 28 29 0 0 chr2 180103485 180103520 -73153063 + AT_rich Low_complexity Low_complexity 1 35 0 2100 129 3 10 chr2 180103741 180104044 -73152539 - AluSx SINE Alu -11 301 1 47 86 0 0 chr2 180104046 180104163 -73152420 + AT_rich Low_complexity Low_complexity 1 117 0 1227 205 87 60 chr2 180104169 180104550 -73152033 - MSTD LTR MaLR -5 391 1 260 211 56 44 chr2 180104573 180104663 -73151920 - L1ME4a LINE L1 -93 6028 5938 525 303 105 17 chr2 180105488 180105726 -73150857 - LTR16A LTR ERVL -53 397 139 343 337 63 39 chr2 180106600 180106675 -73149908 + L3 LINE CR1 298 370 -1207 2071 137 3 3 chr2 180106675 180106974 -73149609 + AluSx SINE Alu 1 299 -13 343 337 63 39 chr2 180106974 180107153 -73149430 + L3 LINE CR1 370 558 -1019 396 273 114 28 chr2 180107153 180107329 -73149254 + L3 LINE CR1 1118 1308 -269 2677 143 39 2 chr2 180107329 180107742 -73148841 + MSTA LTR MaLR 1 428 0 816 168 0 0 chr2 180107789 180107914 -73148669 + FLAM_C SINE Alu 1 125 -8 3050 65 15 18 chr2 180107936 180108336 -73148247 + MLT2A1 LTR ERVL 2 400 -44 525 138 3 60 chr2 180108336 180108677 -73147906 + (TA)n Simple_repeat Simple_repeat 1 321 0 230 230 45 39 chr2 180108682 180108860 -73147723 + (TATG)n Simple_repeat Simple_repeat 2 180 0 * 250 174 28 67 chr2 180108819 180108997 -73147586 + (TA)n Simple_repeat Simple_repeat 1 171 0 242 170 28 71 chr2 180109059 180109241 -73147342 + (TA)n Simple_repeat Simple_repeat 2 175 0 306 114 76 15 chr2 180109583 180109714 -73146869 + (TA)n Simple_repeat Simple_repeat 1 139 0 367 107 36 0 chr2 180109732 180109800 -73146783 + MLT2A2 LTR ERVL 400 453 0 1149 102 11 45 chr2 180109800 180109976 -73146607 + AluSg/x SINE Alu 140 309 -1 377 219 113 102 chr2 180110870 180111048 -73145535 + MLT1K LTR MaLR 129 313 -275 2254 154 3 9 chr2 180111048 180111386 -73145197 + MER1B DNA MER1_type 1 336 -1 377 219 113 102 chr2 180111386 180111490 -73145093 + MLT1K LTR MaLR 313 414 -174 2141 99 39 0 chr2 180111508 180111792 -73144791 + AluSp SINE Alu 1 295 -18 461 227 85 35 chr2 180111869 180112010 -73144573 + MLT1J2 LTR MaLR 303 450 0 298 315 64 109 chr2 180112298 180112609 -73143974 + L2 LINE L2 2943 3239 -33 217 210 32 16 chr2 180112613 180112675 -73143908 + (TATATG)n Simple_repeat Simple_repeat 1 63 0 1656 153 4 0 chr2 180113304 180113552 -73143031 + AluJb SINE Alu 2 250 -62 4425 146 42 48 chr2 180114379 180115167 -73141416 + LTR39 LTR ERV1 1 783 0 226 342 19 25 chr2 180115418 180115579 -73141004 - L1ME LINE L1 -250 5920 5761 1561 180 0 40 chr2 180115632 180115932 -73140651 + AluJo SINE Alu 5 292 -20 2734 180 119 65 chr2 180115962 180116746 -73139837 + LTR1B LTR ERV1 1 826 0 390 237 132 77 chr2 180116831 180117118 -73139465 - L1ME LINE L1 -596 5570 5268 997 183 59 0 chr2 180117128 180117314 -73139269 - MER3 DNA MER1_type 0 209 13 2019 149 3 3 chr2 180117426 180117722 -73138861 - AluSx SINE Alu -16 296 1 496 318 38 24 chr2 180117739 180118028 -73138555 - L1ME LINE L1 -1052 5094 4802 209 189 0 0 chr2 180118029 180118066 -73138517 + (CATTC)n Simple_repeat Simple_repeat 1 37 0 291 332 97 40 chr2 180118303 180118683 -73137900 + MLT1J LTR MaLR 110 511 0 2058 97 30 24 chr2 180118787 180119085 -73137498 + AluSx SINE Alu 1 300 -12 226 178 22 0 chr2 180119172 180119217 -73137366 - Zaphod DNA AcHobo -800 3231 3186 328 218 0 152 chr2 180119310 180119475 -73137108 + MER104 DNA Tc2 3 142 -38 2390 85 0 7 chr2 180119493 180119798 -73136785 + AluSc SINE Alu 1 303 -6 625 93 0 0 chr2 180119898 180119973 -73136610 + AluSg/x SINE Alu 219 293 -17 1835 163 10 27 chr2 180120026 180120327 -73136256 - AluJo SINE Alu -16 296 1 246 62 0 0 chr2 180120352 180120384 -73136199 + (T)n Simple_repeat Simple_repeat 1 32 0 44 56 0 0 chr2 180120668 180120740 -73135843 + AT_rich Low_complexity Low_complexity 1 72 0 2256 113 0 7 chr2 180120847 180121157 -73135426 - AluSx SINE Alu -4 308 1 225 0 0 0 chr2 180121242 180121267 -73135316 + (TTA)n Simple_repeat Simple_repeat 2 26 0 2121 121 0 0 chr2 180121270 180121552 -73135031 - AluSx SINE Alu -30 282 1 292 250 54 0 chr2 180121593 180121685 -73134898 - L1MC/D LINE L1 -2048 5760 5664 1798 212 82 71 chr2 180122232 180122312 -73134271 + MER74B LTR ERVL 1 79 -543 1935 147 0 0 chr2 180122312 180122591 -73133992 - AluSx SINE Alu -29 283 5 1798 212 82 71 chr2 180122591 180123058 -73133525 + MER74B LTR ERVL 79 554 -68 2268 174 35 28 chr2 180123142 180123417 -73133166 - MSTB1 LTR MaLR 0 432 151 2414 87 0 3 chr2 180123417 180123716 -73132867 + AluSx SINE Alu 1 298 -14 2268 174 35 28 chr2 180123716 180123865 -73132718 - MSTB1 LTR MaLR -281 151 5 2242 107 10 7 chr2 180124666 180124974 -73131609 - AluSx SINE Alu -3 309 1 1289 134 179 0 chr2 180125579 180125803 -73130780 + pTR5 LTR ERV1 1352 1615 -823 949 173 107 0 chr2 180125806 180126003 -73130580 + MER45B DNA AcHobo 738 955 -85 663 162 19 149 chr2 180126010 180126164 -73130419 - AluJo SINE Alu -177 135 2 488 204 11 0 chr2 180126166 180126259 -73130324 + MER45B DNA AcHobo 947 1040 0 583 212 25 40 chr2 180126612 180126784 -73129799 + MSTC LTR MaLR 1 185 -272 782 142 128 27 chr2 180127729 180127877 -73128706 - LTR29 LTR ERV1 0 622 488 665 163 19 12 chr2 180127901 180128061 -73128522 + CT-rich Low_complexity Low_complexity 1 161 0 286 105 0 0 chr2 180128063 180128101 -73128482 + (TCCC)n Simple_repeat Simple_repeat 3 40 0 1620 181 16 19 chr2 180128101 180128410 -73128173 - AluJo SINE Alu -2 310 3 2214 101 0 7 chr2 180128421 180128719 -73127864 - AluSx SINE Alu -12 300 5 1773 118 23 0 chr2 180128724 180128986 -73127597 - MER39B LTR ERV1 -385 268 1 934 173 16 22 chr2 180129409 180129594 -73126989 + MER5A DNA MER1_type 1 184 -5 948 159 0 0 chr2 180129734 180129910 -73126673 + CT-rich Low_complexity Low_complexity 3 178 0 2009 232 105 2 chr2 180130472 180130937 -73125646 + MER115 DNA AcHobo 178 690 -3 906 249 48 16 chr2 180131291 180131540 -73125043 + MIR SINE MIR 6 262 0 595 212 31 135 chr2 180131830 180131996 -73124587 + MIR SINE MIR 40 179 -83 494 254 143 32 chr2 180131996 180132185 -73124398 - MER63A DNA MER1_type 0 210 1 595 212 31 135 chr2 180132185 180132240 -73124343 + MIR SINE MIR 179 238 -24 2233 101 40 0 chr2 180132240 180132538 -73124045 - AluSx SINE Alu -2 310 1 203 301 178 0 chr2 180132750 180132823 -73123760 + L2 LINE L2 3185 3270 -2 653 221 60 5 chr2 180133594 180133710 -73122873 - MER5A DNA MER1_type 0 189 57 2220 131 3 0 chr2 180133710 180134016 -73122567 - AluSq SINE Alu -6 307 1 653 221 60 5 chr2 180134016 180134074 -73122509 - MER5A DNA MER1_type -132 57 4 201 246 40 135 chr2 180134125 180134251 -73122332 + MER5B DNA MER1_type 3 116 -62 1748 233 85 18 chr2 180134397 180135331 -73121252 + L1MD3 LINE L1 6898 7982 -13 41809 63 11 3 chr2 180135352 180140302 -73116281 + L1PA6 LINE L1 1 5010 -1144 2089 139 0 0 chr2 180140302 180140597 -73115986 + AluSq SINE Alu 3 297 -16 41809 63 11 3 chr2 180140597 180141750 -73114833 + L1PA6 LINE L1 5010 6152 -2 1275 153 19 2 chr2 180142583 180142888 -73113695 - LTR1B LTR ERV1 0 826 447 1377 182 53 24 chr2 180143280 180143610 -73112973 - L1MCa LINE L1 -5327 894 474 873 128 0 50 chr2 180143617 180143758 -73112825 + AluJb SINE Alu 1 134 -178 37 23 0 0 chr2 180143777 180143821 -73112762 + AT_rich Low_complexity Low_complexity 1 44 0 1611 185 25 123 chr2 180143826 180144200 -73112383 - L1MCa LINE L1 -5977 587 269 851 129 9 9 chr2 180144200 180144316 -73112267 - FLAM_C SINE Alu -17 116 1 1611 185 25 123 chr2 180144316 180144421 -73112162 - L1MCa LINE L1 -6295 269 155 1607 130 4 0 chr2 180144551 180144782 -73111801 + MER34 LTR ERV1 1 232 -310 2676 140 7 19 chr2 180144782 180145203 -73111380 - MSTB1 LTR MaLR -1 431 16 4174 72 34 38 chr2 180145205 180146251 -73110332 + MER11A LTR ERVK 1 1266 0 2096 103 10 19 chr2 180146272 180146584 -73109999 + MER34 LTR ERV1 234 542 0 2094 133 3 3 chr2 180147238 180147547 -73109036 - AluSx SINE Alu -3 309 1 2661 171 71 60 chr2 180148217 180148597 -73107986 - MER63C DNA MER1_type -163 897 506 2429 136 19 0 chr2 180148597 180148957 -73107626 + L1PA16 LINE L1 5791 6157 -9 2661 171 71 60 chr2 180148957 180149212 -73107371 - MER63C DNA MER1_type -554 506 255 253 214 71 24 chr2 180149327 180149411 -73107172 - L1ME4a LINE L1 -28 6093 6006 234 0 0 0 chr2 180149484 180149510 -73107073 + (TG)n Simple_repeat Simple_repeat 2 27 0 356 264 163 0 chr2 180149525 180149654 -73106929 - L1ME4a LINE L1 -261 5860 5711 379 344 16 0 chr2 180149871 180149999 -73106584 + L2 LINE L2 3142 3271 -1 1786 169 75 38 chr2 180150017 180150390 -73106193 - MLT1B LTR MaLR 0 390 4 862 166 20 96 chr2 180150470 180150571 -73106012 - AluJb SINE Alu -23 289 209 2156 107 64 15 chr2 180150571 180150898 -73105685 + MER61A LTR ERV1 1 343 0 862 166 20 96 chr2 180150898 180150995 -73105588 - AluJb SINE Alu -103 209 106 231 285 55 93 chr2 180151003 180151021 -73105562 - HAL1 LINE L1 -951 1556 1539 2294 102 3 0 chr2 180151021 180151325 -73105258 + AluSp SINE Alu 2 306 -7 231 285 55 93 chr2 180151325 180151835 -73104748 - HAL1 LINE L1 -968 1539 1048 192 158 0 0 chr2 180152145 180152183 -73104400 + T-rich Low_complexity Low_complexity 1 38 0 525 281 68 86 chr2 180152612 180153099 -73103484 + MLT1J LTR MaLR 1 478 -33 3229 135 35 20 chr2 180153338 180153877 -73102706 - LTR10A LTR ERV1 -62 547 1 1018 152 44 0 chr2 180153969 180154127 -73102456 - L1PB4 LINE L1 -1 6155 5991 2023 206 69 13 chr2 180154155 180154602 -73101981 - MER74A LTR ERVL -80 478 7 251 250 28 65 chr2 180154835 180154943 -73101640 - MIR SINE MIR -156 106 3 183 129 0 0 chr2 180155253 180155284 -73101299 + (T)n Simple_repeat Simple_repeat 1 31 0 432 162 29 0 chr2 180155729 180155834 -73100749 + (TA)n Simple_repeat Simple_repeat 1 108 0 288 140 0 0 chr2 180155847 180155897 -73100686 - L1MC4 LINE L1 -1339 6703 6654 384 22 0 0 chr2 180155897 180155942 -73100641 + (GA)n Simple_repeat Simple_repeat 2 46 0 3458 168 38 20 chr2 180155945 180156042 -73100541 - L1MA8 LINE L1 -370 5921 5827 2541 30 41 0 chr2 180156042 180156337 -73100246 - AluYa5 SINE Alu -4 307 1 3458 168 38 20 chr2 180156337 180157031 -73099552 - L1MA8 LINE L1 -464 5827 5115 841 222 0 0 chr2 180157057 180157210 -73099373 - AluJb SINE Alu -26 286 134 25 31 0 0 chr2 180157739 180157771 -73098812 + AT_rich Low_complexity Low_complexity 1 32 0 24 77 0 0 chr2 180158341 180158393 -73098190 + AT_rich Low_complexity Low_complexity 1 52 0 761 171 0 0 chr2 180159490 180159607 -73096976 + Tigger1 DNA MER2_type 1 117 -2301 4484 142 10 11 chr2 180159909 180160621 -73095962 - MER50 LTR ERV1 -23 711 1 15305 119 20 12 chr2 180161905 180164197 -73092386 + Tigger1 DNA MER2_type 109 2417 -1 383 265 212 12 chr2 180164315 180164485 -73092098 - HAL1 LINE L1 -755 1752 1549 * 992 235 71 56 chr2 180164480 180164875 -73091708 + HAL1 LINE L1 1813 2213 -294 2397 77 0 3 chr2 180164877 180165176 -73091407 + AluSx SINE Alu 1 298 -14 351 278 41 0 chr2 180165234 180165331 -73091252 + MER94 DNA DNA 32 132 -2 449 261 54 27 chr2 180165335 180165519 -73091064 + HAL1 LINE L1 2318 2506 -1 220 228 18 18 chr2 180165719 180165776 -73090807 + L2 LINE L2 3256 3312 -1 1426 216 18 21 chr2 180166154 180166459 -73090124 + AluJo SINE Alu 1 304 0 239 274 27 0 chr2 180166721 180166794 -73089789 + GA-rich Low_complexity Low_complexity 1 75 0 363 340 84 37 chr2 180167102 180167317 -73089266 + L2 LINE L2 3048 3272 0 1767 159 26 19 chr2 180167327 180167510 -73089073 - AluJo SINE Alu -2 310 123 207 0 0 0 chr2 180167510 180167533 -73089050 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1767 159 26 19 chr2 180167533 180167657 -73088926 - AluJo SINE Alu -189 123 1 1186 247 97 74 chr2 180168509 180168764 -73087819 - L2 LINE L2 0 3313 3065 1920 133 14 3 chr2 180168764 180169049 -73087534 - AluSx SINE Alu -24 288 1 1186 247 97 74 chr2 180169049 180169439 -73087144 - L2 LINE L2 -248 3065 2657 279 272 118 15 chr2 180169439 180169575 -73087008 + MLT1J LTR MaLR 1 150 -361 342 294 34 27 chr2 180169607 180169753 -73086830 + MLT1J2 LTR MaLR 304 450 0 463 300 177 29 chr2 180169755 180170032 -73086551 - L2 LINE L2 -656 2658 2341 2406 67 7 3 chr2 180170055 180170352 -73086231 + AluY SINE Alu 1 298 -13 1134 127 0 0 chr2 180170353 180170518 -73086065 - MSTA LTR MaLR -49 379 215 1025 299 34 3 chr2 180170520 180170844 -73085739 - L2 LINE L2 -966 2348 2015 1908 156 0 3 chr2 180171129 180171445 -73085138 + AluJb SINE Alu 1 315 0 523 342 139 10 chr2 180171628 180171826 -73084757 + L2 LINE L2 2366 2537 -777 1895 130 69 77 chr2 180171826 180172204 -73084379 + THE1C LTR MaLR 1 375 0 523 342 139 10 chr2 180172204 180172409 -73084174 + L2 LINE L2 2537 2821 -493 289 242 31 22 chr2 180172488 180172608 -73083975 + MIR SINE MIR 88 209 -53 190 304 18 0 chr2 180172970 180173026 -73083557 - L2 LINE L2 -12 3260 3204 1588 75 11 193 chr2 180173240 180173588 -73082995 + LTR12 LTR ERV1 1 285 -429 298 250 0 0 chr2 180173589 180173661 -73082922 + LTR30 LTR ERV1 553 624 -98 751 132 0 0 chr2 180173693 180173799 -73082784 + LTR12 LTR ERV1 479 584 -130 239 140 20 0 chr2 180173807 180173857 -73082726 + (TCTA)n Simple_repeat Simple_repeat 3 53 0 283 261 60 49 chr2 180174171 180174356 -73082227 - L1MC/D LINE L1 -726 5444 5259 966 336 34 38 chr2 180174479 180175119 -73081464 - HERV16 LTR ERVL -310 5344 4707 401 219 58 44 chr2 180175214 180175351 -73081232 - HERV16 LTR ERVL -706 4290 4152 * 450 312 29 6 chr2 180175346 180175519 -73081064 - HERV16 LTR ERVL -4817 179 3 711 247 60 16 chr2 180175521 180175844 -73080739 - LTR16B LTR ERVL 0 464 36 757 125 0 0 chr2 180175855 180175959 -73080624 - LTR12 LTR ERV1 -130 584 481 396 232 10 0 chr2 180175960 180176059 -73080524 - LTR30 LTR ERV1 -79 643 544 1559 110 21 8 chr2 180176059 180176295 -73080288 - LTR12 LTR ERV1 -437 277 39 7728 64 7 1 chr2 180176295 180177998 -73078585 + L1PA6 LINE L1 4446 6153 -1 258 231 0 0 chr2 180178006 180178058 -73078525 - LTR30 LTR ERV1 -670 52 1 4855 120 17 43 chr2 180178097 180178289 -73078294 - L1MC1 LINE L1 0 6333 6138 680 154 0 0 chr2 180178289 180178393 -73078190 + U13 snRNA snRNA 1 104 0 4855 120 17 43 chr2 180178393 180178969 -73077614 - L1MC1 LINE L1 -195 6138 5585 1951 179 58 29 chr2 180179461 180179937 -73076646 - LTR45B LTR ERV1 0 525 3 850 232 55 14 chr2 180180307 180180527 -73076056 + MIR SINE MIR 1 229 -33 1467 204 69 39 chr2 180180663 180181069 -73075514 + LTR52 LTR ERVL 1 418 -3 3663 143 29 15 chr2 180181373 180181825 -73074758 + MER6A DNA MER2_type -9 453 -412 2147 129 0 3 chr2 180181825 180182127 -73074456 + AluSx SINE Alu 1 301 -11 3663 143 29 15 chr2 180182127 180182261 -73074322 + MER6A DNA MER2_type 453 584 -21 216 340 88 20 chr2 180182326 180182473 -73074110 - MIR SINE MIR -12 250 94 2318 201 27 73 chr2 180182473 180182881 -73073702 + MLT1E LTR MaLR 1 375 -218 2308 117 3 0 chr2 180182881 180183190 -73073393 + AluSq SINE Alu 1 310 -3 2318 201 27 73 chr2 180183190 180183372 -73073211 + MLT1E LTR MaLR 375 564 -29 823 222 35 0 chr2 180185549 180185720 -73070863 - MER5A DNA MER1_type -12 177 1 772 205 11 54 chr2 180185727 180185912 -73070671 + MER5B DNA MER1_type 1 177 -1 237 321 0 0 chr2 180186615 180186668 -73069915 + L2 LINE L2 3246 3298 -15 180 111 0 0 chr2 180186717 180186744 -73069839 + (T)n Simple_repeat Simple_repeat 1 27 0 9460 78 81 2 chr2 180186751 180188033 -73068550 - SVA Other Other -3 1383 1 352 257 40 57 chr2 180188076 180188251 -73068332 - HAL1 LINE L1 0 2507 2336 222 62 0 0 chr2 180188622 180188654 -73067929 + (T)n Simple_repeat Simple_repeat 1 32 0 552 280 19 0 chr2 180188667 180188824 -73067759 - L1MEc LINE L1 -3627 2913 2754 337 272 32 0 chr2 180188875 180189000 -73067583 - L1MEc LINE L1 -4663 2058 1930 2219 108 3 3 chr2 180189185 180189482 -73067101 + AluSx SINE Alu 1 297 -15 22 0 0 0 chr2 180189595 180189617 -73066966 + AT_rich Low_complexity Low_complexity 1 22 0 1617 231 77 55 chr2 180189902 180190395 -73066188 + MLT1D LTR MaLR 1 504 -1 2292 95 6 16 chr2 180190718 180191064 -73065519 - AluSx SINE Alu 0 343 1 1634 168 56 61 chr2 180192902 180193296 -73063287 - L1MD1 LINE L1 0 6242 5851 * 4724 207 82 22 chr2 180193292 180193415 -73063168 - L1MEc LINE L1 -5305 1235 1121 1865 155 3 16 chr2 180193415 180193719 -73062864 - AluJb SINE Alu -12 300 1 4724 207 82 22 chr2 180193719 180194745 -73061838 - L1MEc LINE L1 -5419 1121 17 1642 146 91 0 chr2 180195011 180195285 -73061298 + AluJb SINE Alu 1 299 -13 405 301 20 10 chr2 180195403 180195599 -73060984 + HAL1 LINE L1 2181 2378 -129 2000 149 33 36 chr2 180195601 180195963 -73060620 - MER46B DNA MER2_type 0 236 1 5616 177 36 24 chr2 180196558 180197628 -73058955 + Tigger6a DNA MER2_type 1 1083 0 1967 161 0 3 chr2 180198573 180198883 -73057700 + AluJb SINE Alu 1 309 -3 230 227 30 0 chr2 180198978 180199044 -73057539 + (TA)n Simple_repeat Simple_repeat 1 68 0 8232 159 126 48 chr2 180199276 180200905 -73055678 - MER52A LTR ERV1 0 1755 1 2245 213 75 17 chr2 180201092 180201741 -73054842 - Charlie2 DNA MER1_type -13 2849 2163 1032 286 87 5 chr2 180201743 180202134 -73054449 - Charlie2b DNA MER1_type -1514 1268 846 786 276 91 11 chr2 180202175 180202439 -73054144 - Charlie2b DNA MER1_type -2574 288 4 2122 103 41 0 chr2 180203324 180203615 -73052968 - AluSx SINE Alu -9 303 1 22 70 0 0 chr2 180203637 180203680 -73052903 + AT_rich Low_complexity Low_complexity 1 43 0 765 208 134 10 chr2 180204003 180204205 -73052378 + MLT1F1 LTR MaLR 1 227 -315 1059 201 89 5 chr2 180204237 180204451 -73052132 + MLT1F1 LTR MaLR 334 565 -2 818 79 88 0 chr2 180204550 180204664 -73051919 - AluSg/x SINE Alu -18 292 169 418 279 12 56 chr2 180204742 180204903 -73051680 + MER20B DNA MER1_type 3 156 -627 361 241 12 12 chr2 180204898 180204981 -73051602 + MER20B DNA MER1_type 699 781 -2 * 2846 229 53 7 chr2 180205818 180206533 -73050050 - L1ME1 LINE L1 0 6166 5419 1651 217 49 5 chr2 180206659 180207069 -73049514 - L1MCc LINE L1 -4887 1536 1162 189 0 0 0 chr2 180207087 180207108 -73049475 + (TC)n Simple_repeat Simple_repeat 2 22 0 2122 135 0 0 chr2 180207108 180207405 -73049178 - AluSx SINE Alu -15 297 1 331 267 162 0 chr2 180207409 180207514 -73049069 - L1MCc LINE L1 -5356 1067 946 396 248 20 67 chr2 180207547 180207696 -73048887 - L1MCc LINE L1 -5589 834 693 225 0 0 0 chr2 180207708 180207733 -73048850 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1697 259 68 23 chr2 180207767 180208322 -73048261 - L1MCc LINE L1 -5827 596 17 2129 125 10 0 chr2 180208333 180208628 -73047955 - AluSx SINE Alu -14 298 1 216 374 9 9 chr2 180208630 180208737 -73047846 - L3b LINE CR1 -113 1470 1364 1038 241 43 87 chr2 180208872 180209332 -73047251 + MLT1J1 LTR MaLR 4 443 -3 553 281 39 0 chr2 180209511 180209664 -73046919 + MER117 DNA MER1_type 1 159 -38 1154 242 158 30 chr2 180210457 180210949 -73045634 + L1MC4 LINE L1 7488 8042 0 288 242 143 0 chr2 180211109 180211200 -73045383 - L1ME LINE L1 -404 5717 5614 831 244 52 31 chr2 180211538 180211767 -73044816 + MLT1F1 LTR MaLR 334 567 0 2476 243 122 9 chr2 180211801 180212555 -73044028 + L1ME3 LINE L1 5316 6154 -8 591 254 85 18 chr2 180212568 180212829 -73043754 + L2 LINE L2 2771 3042 -271 1676 222 58 20 chr2 180212901 180213351 -73043232 - MLT1C LTR MaLR 0 467 1 858 279 35 18 chr2 180213732 180214015 -73042568 + L2 LINE L2 3010 3297 -16 2660 117 15 68 chr2 180215862 180215994 -73040589 - LTR56 LTR ERV1 0 445 308 1970 151 0 3 chr2 180215994 180216298 -73040285 - AluJb SINE Alu -1 311 9 2660 117 15 68 chr2 180216298 180216635 -73039948 - LTR56 LTR ERV1 -137 308 1 1795 186 129 54 chr2 180217263 180217742 -73038841 + MLT2B2 LTR ERVL 1 515 0 528 318 126 5 chr2 180218985 180219208 -73037375 - MIR SINE MIR 0 262 13 287 259 47 0 chr2 180219561 180219646 -73036937 - L1MC4 LINE L1 -1338 6704 6616 800 153 0 29 chr2 180219672 180219809 -73036774 - FLAM_C SINE Alu -10 133 1 377 234 36 9 chr2 180219824 180219935 -73036648 + L1ME4a LINE L1 5961 6074 -47 1176 230 50 7 chr2 180219995 180220273 -73036310 - L1MB8 LINE L1 -4 6174 5885 395 252 29 19 chr2 180221108 180221211 -73035372 + MIR SINE MIR 159 262 0 193 284 227 11 chr2 180224613 180224701 -73031882 + MIR3 SINE MIR 51 157 -51 21 0 0 0 chr2 180224922 180224943 -73031640 + AT_rich Low_complexity Low_complexity 1 21 0 213 152 0 0 chr2 180225119 180225152 -73031431 - L2 LINE L2 -42 3271 3239 2259 114 3 0 chr2 180226192 180226499 -73030084 - AluSx SINE Alu -4 308 1 1897 185 25 0 chr2 180226678 180227003 -73029580 + MER58B DNA MER1_type 1 333 -8 193 288 34 17 chr2 180228123 180228182 -73028401 + L2 LINE L2 3186 3245 -27 1597 194 129 65 chr2 180228445 180228495 -73028088 - L1MC5 LINE L1 -46 7915 7870 1785 176 7 3 chr2 180228495 180228801 -73027782 - AluJo SINE Alu -5 307 1 1597 194 129 65 chr2 180228801 180229401 -73027182 - L1MC5 LINE L1 -91 7870 7223 383 256 132 57 chr2 180230462 180230833 -73025750 + MLT1J LTR MaLR 110 508 -3 414 288 72 0 chr2 180231116 180231269 -73025314 + MIR SINE MIR 37 200 -62 212 317 100 0 chr2 180231297 180231357 -73025226 + MIR SINE MIR 3 68 -194 2449 254 98 22 chr2 180231371 180232539 -73024044 - L1M4 LINE L1 -1850 4296 2990 2418 90 0 0 chr2 180233440 180233741 -73022842 - AluSx SINE Alu -11 301 1 332 288 43 14 chr2 180234026 180234041 -73022542 - L1ME1 LINE L1 -3 6163 6149 5149 164 15 57 chr2 180234041 180234302 -73022281 - L1MA8 LINE L1 -10 6281 6010 1815 166 14 0 chr2 180234302 180234591 -73021992 - AluJo SINE Alu -19 293 1 5149 164 15 57 chr2 180234591 180235107 -73021476 - L1MA8 LINE L1 -281 6010 5474 2287 124 39 36 chr2 180235107 180235470 -73021113 - THE1B LTR MaLR 0 364 1 12173 102 6 6 chr2 180235470 180237051 -73019532 - THE1B-int LTR MaLR 0 1580 1 2301 130 30 43 chr2 180237051 180237420 -73019163 - THE1B LTR MaLR 0 364 1 5149 164 15 57 chr2 180237420 180237802 -73018781 - L1MA8 LINE L1 -814 5477 5166 422 233 62 23 chr2 180238032 180238161 -73018422 - L2 LINE L2 0 3313 3180 597 250 45 101 chr2 180238168 180238504 -73018079 - L2 LINE L2 0 3313 2997 301 74 19 19 chr2 180240704 180240758 -73015825 + (CA)n Simple_repeat Simple_repeat 2 55 0 258 281 116 45 chr2 180241051 180241343 -73015240 - L1ME1 LINE L1 -248 5873 5561 401 264 25 50 chr2 180241355 180241476 -73015107 - MIR SINE MIR -111 151 34 2390 72 0 3 chr2 180241589 180241881 -73014702 + AluY SINE Alu 1 291 -20 2277 88 3 7 chr2 180242229 180242524 -73014059 - AluSq SINE Alu -19 294 1 1268 248 37 18 chr2 180242527 180242854 -73013729 - L1MD2 LINE L1 -12 6347 6015 3192 254 90 22 chr2 180244655 180245893 -73010690 - L2 LINE L2 0 3313 1999 1993 243 35 4 chr2 180246606 180247067 -73009516 + L1MDa LINE L1 3 477 -6063 2213 139 32 55 chr2 180247081 180247265 -73009318 + L1MDa LINE L1 1173 1360 -5180 2597 54 0 0 chr2 180247265 180247562 -73009021 + AluY SINE Alu 1 297 -14 2213 139 32 55 chr2 180247562 180247935 -73008648 + L1MDa LINE L1 1360 1829 -4711 2166 81 6 72 chr2 180247935 180248270 -73008313 - AluSp SINE Alu 0 313 1 2213 139 32 55 chr2 180248270 180248526 -73008057 + L1MDa LINE L1 1829 2089 -4451 1894 110 29 4 chr2 180248670 180248971 -73007612 + AluSg SINE Alu 1 308 0 1765 174 3 10 chr2 180250797 180251102 -73005481 + AluJo SINE Alu 1 303 -9 189 283 11 76 chr2 180251127 180251219 -73005364 + L2 LINE L2 3183 3268 -4 2005 195 54 18 chr2 180251745 180252191 -73004392 - MLT1C LTR MaLR 0 467 6 977 223 84 72 chr2 180253013 180253098 -73003485 - L1ME1 LINE L1 -6 6172 6090 1883 138 39 0 chr2 180253098 180253380 -73003203 + AluSx SINE Alu 1 293 -19 977 223 84 72 chr2 180253380 180253726 -73002857 - L1ME1 LINE L1 -88 6090 5761 2489 77 0 0 chr2 180254007 180254307 -73002276 - AluSp SINE Alu -13 300 1 1763 101 116 11 chr2 180254664 180254940 -73001643 - AluSg SINE Alu -5 305 1 210 71 0 0 chr2 180255334 180255362 -73001221 + (A)n Simple_repeat Simple_repeat 1 28 0 1347 201 82 18 chr2 180255980 180256424 -73000159 - LTR48 LTR ERV1 0 787 123 323 221 101 0 chr2 180256391 180256497 -73000086 - LTR48B LTR ERV1 -583 124 1 * 868 148 42 48 chr2 180256539 180256728 -72999855 - MER53 DNA DNA -1 188 1 591 259 109 5 chr2 180257115 180257335 -72999248 + MIR SINE MIR 8 250 -12 263 351 97 8 chr2 180257393 180257527 -72999056 + L2 LINE L2 3168 3313 0 333 162 73 0 chr2 180257842 180257910 -72998673 - MLT1A1 LTR MaLR 0 365 293 29 28 0 0 chr2 180257910 180257946 -72998637 + AT_rich Low_complexity Low_complexity 1 36 0 1254 166 114 17 chr2 180257954 180258236 -72998347 - MLT1A1 LTR MaLR -47 349 1 23 42 0 21 chr2 180258418 180258438 -72998145 + AT_rich Low_complexity Low_complexity 1 20 -27 695 224 0 15 chr2 180258438 180258572 -72998011 - FLAM_A SINE Alu -1 132 1 23 42 0 21 chr2 180258572 180258599 -72997984 + AT_rich Low_complexity Low_complexity 20 47 0 1879 150 3 7 chr2 180258783 180259069 -72997514 + AluJb SINE Alu 1 285 -27 35 45 0 15 chr2 180259114 180259162 -72997421 + AT_rich Low_complexity Low_complexity 1 49 -17 2301 103 0 7 chr2 180259162 180259472 -72997111 - AluSx SINE Alu -4 308 1 35 45 0 15 chr2 180259472 180259490 -72997093 + AT_rich Low_complexity Low_complexity 49 66 0 252 0 0 0 chr2 180260589 180260617 -72995966 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 610 193 0 9 chr2 180260776 180260890 -72995693 + MER94 DNA DNA 1 113 -21 187 346 57 38 chr2 180261245 180261404 -72995179 + L2 LINE L2 2871 3032 -240 335 307 36 21 chr2 180262961 180263101 -72993482 - MIR3 SINE MIR -3 205 64 618 241 75 0 chr2 180263107 180263240 -72993343 - MLT1H1 LTR MaLR -412 143 1 1080 247 54 59 chr2 180263306 180263970 -72992613 - L1MEc LINE L1 -5075 1321 661 591 244 80 11 chr2 180264112 180264288 -72992295 - L2 LINE L2 0 3313 3126 650 304 30 66 chr2 180264389 180264829 -72991754 - L1MEc LINE L1 -5971 425 2 1251 275 58 37 chr2 180265913 180266682 -72989901 - L2 LINE L2 -4 3309 2528 2764 135 44 64 chr2 180266918 180267482 -72989101 - MER34B LTR ERV1 -2 563 11 299 282 120 0 chr2 180267605 180267722 -72988861 - L1MC/D LINE L1 -2112 5696 5566 997 130 0 0 chr2 180268005 180268143 -72988440 - MER72 LTR ERV1 0 722 585 567 141 0 0 chr2 180268191 180268269 -72988314 + AluJ/FLAM SINE Alu 2 79 -233 813 157 0 0 chr2 180268272 180268393 -72988190 - AluJo/FLAM SINE Alu -186 126 6 1066 211 66 83 chr2 180268446 180268796 -72987787 + MER2 DNA MER2_type 1 344 0 410 209 8 0 chr2 180270511 180270640 -72985943 + (TG)n Simple_repeat Simple_repeat 1 130 0 244 41 0 184 chr2 180271038 180271065 -72985518 - U3 snRNA snRNA -177 40 24 2297 85 14 0 chr2 180271065 180271359 -72985224 + AluY SINE Alu 1 298 -13 244 41 0 184 chr2 180271359 180271380 -72985203 - U3 snRNA snRNA -193 24 1 2321 95 3 0 chr2 180271657 180271953 -72984630 - AluSp SINE Alu -16 297 1 292 345 86 0 chr2 180273178 180273294 -72983289 + L2 LINE L2 3147 3272 0 1252 209 0 46 chr2 180273450 180273733 -72982850 + AluJo SINE Alu 30 299 -13 2164 128 0 7 chr2 180273756 180274060 -72982523 + AluSx SINE Alu 1 302 -10 2014 137 30 57 chr2 180274402 180274428 -72982155 - MLT1A1 LTR MaLR -9 356 331 1822 173 0 3 chr2 180274428 180274749 -72981834 - AluJb SINE Alu 0 320 1 2014 137 30 57 chr2 180274749 180275087 -72981496 - MLT1A1 LTR MaLR -34 331 1 1984 189 78 73 chr2 180275274 180275433 -72981150 - MLT1E1 LTR MaLR 0 654 497 1743 153 7 31 chr2 180275433 180275748 -72980835 + AluJo SINE Alu 1 308 0 1984 189 78 73 chr2 180275748 180276136 -72980447 - MLT1E1 LTR MaLR -157 497 103 415 250 11 0 chr2 180276106 180276194 -72980389 - MLT1E LTR MaLR -433 160 72 * 4995 168 25 5 chr2 180276283 180277157 -72979426 - L1MB1 LINE L1 -1 6167 5276 316 316 72 26 chr2 180277356 180277508 -72979075 + L2 LINE L2 2587 2745 -569 1175 190 92 83 chr2 180277695 180278043 -72978540 - MLT1A1 LTR MaLR 0 365 15 1991 208 37 15 chr2 180279746 180280203 -72976380 - MLT1C LTR MaLR 0 467 1 316 239 192 78 chr2 180280589 180280682 -72975901 + Charlie8 DNA MER1_type 1 82 -259 1691 156 34 0 chr2 180280682 180280945 -72975638 + AluJb SINE Alu 1 272 -40 1799 107 122 4 chr2 180280945 180281206 -72975377 + AluSq SINE Alu 21 313 0 316 239 192 78 chr2 180281206 180281366 -72975217 + Charlie8 DNA MER1_type 81 284 -57 1142 273 107 50 chr2 180282482 180283060 -72973523 - MLT1L LTR MaLR -4 611 1 1941 104 0 0 chr2 180283132 180283382 -72973201 + AluY SINE Alu 1 250 -61 773 202 0 0 chr2 180283391 180283510 -72973073 - FRAM SINE Alu -53 123 5 190 424 45 8 chr2 180284589 180284721 -72971862 - L2 LINE L2 0 3272 3136 240 218 0 0 chr2 180285080 180285135 -72971448 + A-rich Low_complexity Low_complexity 1 55 0 809 275 9 18 chr2 180285996 180286218 -72970365 - MIR SINE MIR -30 232 13 260 282 8 48 chr2 180286513 180286637 -72969946 + GA-rich Low_complexity Low_complexity 1 119 0 1801 157 65 52 chr2 180287355 180287737 -72968846 - MLT2C1 LTR ERVL -6 391 5 283 246 62 79 chr2 180287915 180288058 -72968525 - MIR SINE MIR -80 128 7 182 327 0 0 chr2 180288455 180288507 -72968076 - MIR SINE MIR -150 112 61 2430 148 8 14 chr2 180289062 180289426 -72967157 - THE1B LTR MaLR 0 364 3 10637 84 9 5 chr2 180289428 180290923 -72965660 - THE1B-int LTR MaLR 0 1580 1 21 0 0 0 chr2 180291598 180291619 -72964964 + AT_rich Low_complexity Low_complexity 1 21 0 405 0 0 0 chr2 180292844 180292889 -72963694 + (TG)n Simple_repeat Simple_repeat 2 46 0 274 233 256 0 chr2 180293260 180293350 -72963233 + MIR SINE MIR 121 233 -29 499 141 0 0 chr2 180294531 180294609 -72961974 + FAM SINE Alu 95 172 -13 514 249 100 76 chr2 180295412 180295661 -72960922 - MIR SINE MIR 0 262 8 1486 188 11 17 chr2 180296359 180296646 -72959937 - AluJo SINE Alu -12 300 16 411 217 36 58 chr2 180296964 180297089 -72959494 + MIR SINE MIR 34 154 -66 261 277 0 0 chr2 180297126 180297191 -72959392 - MIR SINE MIR -13 249 185 772 250 156 34 chr2 180297707 180298027 -72958556 - LTR16C LTR ERVL -3 488 130 275 277 53 11 chr2 180300361 180300455 -72956128 + MIR SINE MIR 37 134 -128 1587 231 43 9 chr2 180300602 180301040 -72955543 + L1ME2 LINE L1 5704 6156 -8 567 270 67 21 chr2 180302697 180303086 -72953497 - L1MC5 LINE L1 -45 7916 7510 235 71 48 0 chr2 180303086 180303128 -72953455 + CT-rich Low_complexity Low_complexity 2 45 0 335 291 73 7 chr2 180303182 180303333 -72953250 - L1MC5 LINE L1 -532 7429 7269 254 275 0 0 chr2 180303964 180304033 -72952550 + (TA)n Simple_repeat Simple_repeat 2 70 0 1759 79 4 0 chr2 180304463 180304715 -72951868 + L1PB1 LINE L1 5539 5791 -360 273 114 57 11 chr2 180304715 180304803 -72951780 + (TA)n Simple_repeat Simple_repeat 1 92 0 2620 89 5 8 chr2 180304803 180305173 -72951410 + L1PB1 LINE L1 5782 6150 -1 21 36 0 0 chr2 180305850 180305878 -72950705 + AT_rich Low_complexity Low_complexity 1 28 0 2795 13 0 6 chr2 180306280 180306593 -72949990 - AluYa5 SINE Alu 0 311 1 216 0 0 0 chr2 180308566 180308590 -72947993 + (A)n Simple_repeat Simple_repeat 1 24 0 556 305 29 23 chr2 180311011 180311185 -72945398 + MER5B DNA MER1_type 3 177 -1 556 336 14 9 chr2 180311523 180311734 -72944849 - Charlie1 DNA MER1_type -2548 213 2 2386 124 8 0 chr2 180311902 180312264 -72944319 - MER47A DNA MER2_type 0 366 2 23 54 0 0 chr2 180312591 180312628 -72943955 + AT_rich Low_complexity Low_complexity 1 37 0 1808 142 27 20 chr2 180313513 180313809 -72942774 + AluJb SINE Alu 1 298 -14 460 294 37 21 chr2 180314398 180314585 -72941998 + MIR SINE MIR 8 197 -65 334 310 124 7 chr2 180314838 180314983 -72941600 - L2 LINE L2 -2 3311 3150 209 293 12 37 chr2 180316370 180316452 -72940131 - MIR SINE MIR 0 262 183 33 0 0 0 chr2 180316608 180316641 -72939942 + AT_rich Low_complexity Low_complexity 1 33 0 1010 189 0 6 chr2 180317427 180317607 -72938976 - AluJb SINE Alu -7 305 127 30 27 0 0 chr2 180317609 180317646 -72938937 + AT_rich Low_complexity Low_complexity 1 37 0 317 264 33 58 chr2 180317652 180317773 -72938810 - HAL1 LINE L1 -14 2493 2376 2417 96 0 0 chr2 180318095 180318397 -72938186 - AluSq SINE Alu -11 302 1 2309 169 98 2 chr2 180319188 180319690 -72936893 - MER45B DNA AcHobo 0 1040 491 576 155 101 101 chr2 180319691 180319762 -72936821 - MER2 DNA MER2_type -1 344 274 2162 98 41 10 chr2 180319762 180320057 -72936526 + AluSx SINE Alu 1 304 -8 576 155 101 101 chr2 180320057 180320153 -72936430 - MER2 DNA MER2_type -70 275 177 261 310 0 0 chr2 180320212 180320299 -72936284 - L1ME LINE L1 -527 5594 5508 455 152 120 0 chr2 180321454 180321546 -72935037 + MER46A DNA MER2_type 93 195 -41 275 263 125 0 chr2 180322305 180322385 -72934198 + MIR SINE MIR 63 152 -110 718 332 18 22 chr2 180324037 180324266 -72932317 - MIR SINE MIR -21 241 14 203 149 0 21 chr2 180324321 180324368 -72932215 + (CAAA)n Simple_repeat Simple_repeat 3 48 0 1483 191 42 0 chr2 180324430 180324692 -72931891 - AluJo SINE Alu -39 273 1 3780 108 2 23 chr2 180326006 180326572 -72930011 - MER41A LTR ERV1 0 554 1 236 256 112 40 chr2 180327628 180327753 -72928830 - MIR3 SINE MIR -32 176 43 2139 160 50 19 chr2 180327901 180328320 -72928263 + MSTB1 LTR MaLR 1 432 0 402 0 0 49 chr2 180328620 180328681 -72927902 + (CA)n Simple_repeat Simple_repeat 2 59 0 309 358 8 22 chr2 180328882 180329016 -72927567 - L2 LINE L2 -2 3270 3139 1375 221 158 25 chr2 180329198 180329723 -72926860 - MLT1G1 LTR MaLR 0 595 1 608 197 75 58 chr2 180330377 180330565 -72926018 + MER46C DNA MER2_type 7 197 -141 180 278 0 19 chr2 180331759 180331813 -72924770 + MIR SINE MIR 52 104 -158 865 167 27 50 chr2 180332500 180332722 -72923861 - L1MB5 LINE L1 -6 6168 5952 1349 236 39 17 chr2 180332902 180333308 -72923275 - L1MB8 LINE L1 0 6178 5764 201 206 41 68 chr2 180333328 180333401 -72923182 + MIR3 SINE MIR 123 193 -15 263 288 0 41 chr2 180333446 180333519 -72923064 - L2 LINE L2 -3 3310 3241 321 258 267 0 chr2 180333752 180333872 -72922711 + L2 LINE L2 3121 3272 0 348 284 65 52 chr2 180336538 180336693 -72919890 + MIR3 SINE MIR 43 199 -9 2389 78 0 3 chr2 180337164 180337459 -72919124 + AluY SINE Alu 1 294 -17 279 289 9 0 chr2 180337497 180337611 -72918972 - L1ME4a LINE L1 -72 6049 5935 2449 235 9 0 chr2 180337642 180338289 -72918294 - L1P LINE L1 -2867 3279 2627 3407 96 0 18 chr2 180338302 180338792 -72917791 + L1PA15 LINE L1 5672 6152 -13 415 250 26 17 chr2 180339249 180339365 -72917218 - MIR SINE MIR -10 252 136 5036 218 88 55 chr2 180339367 180341534 -72915049 - L1ME LINE L1 -1898 4182 1991 549 304 175 7 chr2 180341538 180341818 -72914765 - LTR16B LTR ERVL -4 460 134 2730 256 56 46 chr2 180341993 180343956 -72912627 - L1ME LINE L1 -4267 1994 2 402 189 23 106 chr2 180343943 180344003 -72912580 - MIR SINE MIR -97 165 120 * 252 0 0 0 chr2 180344003 180344031 -72912552 + (CA)n Simple_repeat Simple_repeat 1 28 0 402 189 23 106 chr2 180344031 180344102 -72912481 - MIR SINE MIR -142 120 45 1835 140 17 10 chr2 180344440 180344740 -72911843 + AluJb SINE Alu 11 344 0 247 62 0 0 chr2 180344740 180344772 -72911811 + (A)n Simple_repeat Simple_repeat 1 180 0 401 262 24 8 chr2 180345409 180345535 -72911048 - L2 LINE L2 -514 2800 2673 185 327 19 0 chr2 180349268 180349320 -72907263 - L2 LINE L2 -9 3304 3252 227 341 0 12 chr2 180349554 180349639 -72906944 + MIR SINE MIR 71 154 -108 253 224 26 26 chr2 180351335 180351411 -72905172 + L2 LINE L2 986 1061 -2253 2032 153 0 3 chr2 180351450 180351758 -72904825 + AluSx SINE Alu 1 307 -5 195 333 67 40 chr2 180351843 180352143 -72904440 + L2 LINE L2 1089 1396 -1918 294 206 0 0 chr2 180352657 180352725 -72903858 + (TA)n Simple_repeat Simple_repeat 1 68 0 584 312 68 37 chr2 180352789 180353244 -72903339 + L2 LINE L2 1543 2011 -1303 1989 109 0 62 chr2 180353780 180354101 -72902482 - AluSx SINE Alu -11 301 1 1338 117 38 9 chr2 180355558 180355771 -72900812 - MSTB LTR MaLR 0 426 208 459 90 0 45 chr2 180355771 180355838 -72900745 - AluJ/FLAM SINE Alu -221 91 28 255 304 54 0 chr2 180355963 180356055 -72900528 + MIR SINE MIR 116 212 -50 366 169 14 28 chr2 180356472 180356543 -72900040 + MER116 DNA Mariner 9 78 -2 292 219 24 73 chr2 180357016 180357098 -72899485 + MER112 DNA MER1_type 8 85 -175 222 37 0 0 chr2 180357131 180357158 -72899425 + (CTATT)n Simple_repeat Simple_repeat 3 29 0 301 264 107 17 chr2 180358268 180358408 -72898175 + MIR SINE MIR 22 169 -65 261 272 49 0 chr2 180358470 180358551 -72898032 + MARNA DNA Mariner 397 481 -105 486 304 47 28 chr2 180358600 180358814 -72897769 - MIR SINE MIR -17 245 28 2270 131 118 21 chr2 180359303 180359692 -72896891 + MSTA LTR MaLR 1 427 -1 3538 73 1 0 chr2 180360449 180361080 -72895503 + L1PA7 LINE L1 5064 5695 -459 17703 37 4 2 chr2 180361080 180363885 -72892698 - L1PA5 LINE L1 -5 6149 3341 3595 58 2 40 chr2 180363902 180364371 -72892212 + L1PA7 LINE L1 5702 6152 -2 1238 307 38 26 chr2 180365568 180366178 -72890405 + L1MC4a LINE L1 5317 5933 -1875 1656 149 4 8 chr2 180366382 180366637 -72889946 + AluJb SINE Alu 36 289 -23 362 267 23 12 chr2 180367252 180367338 -72889245 + L2 LINE L2 3184 3270 -2 799 232 45 22 chr2 180367467 180367691 -72888892 + MIR SINE MIR 5 233 -29 249 246 51 51 chr2 180369483 180369601 -72886982 + MIR SINE MIR 95 212 -50 282 116 0 0 chr2 180369625 180369668 -72886915 + (CAT)n Simple_repeat Simple_repeat 1 43 0 1815 191 90 8 chr2 180369969 180370335 -72886248 - MSTD LTR MaLR 0 396 1 559 261 126 4 chr2 180371985 180372223 -72884360 + LTR16C LTR ERVL 225 491 0 2207 147 8 25 chr2 180372270 180372631 -72883952 - THE1A LTR MaLR 0 355 1 897 201 18 0 chr2 180373066 180373230 -72883353 + MER58B DNA MER1_type 174 340 -1 219 292 112 34 chr2 180373230 180373319 -72883264 + L2 LINE L2 3147 3242 -30 2279 98 3 22 chr2 180373734 180374052 -72882531 + AluSx SINE Alu 1 312 0 381 329 40 101 chr2 180374242 180374295 -72882288 + L2 LINE L2 2809 2864 -408 1187 230 9 0 chr2 180374295 180374517 -72882066 + MER58A DNA MER1_type 1 224 0 381 329 40 101 chr2 180374517 180374937 -72881646 + L2 LINE L2 2864 3253 -19 261 83 0 0 chr2 180376441 180376477 -72880106 + (TA)n Simple_repeat Simple_repeat 2 37 0 978 188 6 44 chr2 180377604 180377679 -72878904 - MER45A DNA AcHobo -1407 174 98 2105 132 0 3 chr2 180377679 180377974 -72878609 + AluSx SINE Alu 4 297 -15 978 188 6 44 chr2 180377974 180378079 -72878504 - MER45A DNA AcHobo -1483 98 1 204 40 0 0 chr2 180378226 180378251 -72878332 + (TTCTCC)n Simple_repeat Simple_repeat 5 29 0 358 286 48 48 chr2 180379492 180379660 -72876923 + LTR16C LTR ERVL 322 489 -2 192 329 27 0 chr2 180379857 180379930 -72876653 - L2 LINE L2 0 3272 3198 607 188 81 31 chr2 180383980 180384140 -72872443 - L1MB8 LINE L1 0 6178 6011 23 0 0 0 chr2 180384216 180384239 -72872344 + AT_rich Low_complexity Low_complexity 1 23 0 1815 156 3 14 chr2 180384245 180384528 -72872055 - AluJo SINE Alu -30 282 3 338 0 24 0 chr2 180384561 180384603 -72871980 + (TTTTA)n Simple_repeat Simple_repeat 5 47 0 1734 183 3 0 chr2 180387082 180387367 -72869216 - AluJo SINE Alu -26 286 1 731 223 84 66 chr2 180387369 180387656 -72868927 - L1MC4 LINE L1 0 8042 7751 294 268 134 14 chr2 180388429 180388571 -72868012 - MIR SINE MIR -6 256 98 410 294 92 94 chr2 180388580 180389049 -72867534 - L2 LINE L2 0 3272 2805 1431 129 10 0 chr2 180389124 180389353 -72867230 - AluJb SINE Alu 0 309 79 2171 121 0 0 chr2 180389915 180390220 -72866363 + AluSx SINE Alu 1 305 -7 1274 99 0 0 chr2 180390220 180390382 -72866201 + AluSq SINE Alu 137 298 -15 233 211 0 19 chr2 180390437 180390489 -72866094 - L2 LINE L2 -74 3239 3189 344 311 89 29 chr2 180391639 180391954 -72864629 + L2 LINE L2 2640 2973 -341 191 216 0 0 chr2 180392171 180392208 -72864375 + L2 LINE L2 3236 3272 0 494 244 69 0 chr2 180393768 180393899 -72862684 - MER91A DNA MER1_type -2 194 55 186 209 0 0 chr2 180394628 180394671 -72861912 + (TTA)n Simple_repeat Simple_repeat 3 45 0 432 270 185 6 chr2 180394678 180394856 -72861727 - MIR SINE MIR -12 250 41 335 306 40 24 chr2 180395629 180395753 -72860830 - MIR3 SINE MIR -48 160 35 1193 206 150 79 chr2 180397274 180397855 -72858728 - MLT1G3 LTR MaLR 0 530 1 378 280 38 112 chr2 180397855 180398276 -72858307 - MLT1G3-int LTR MaLR 0 1371 982 2179 135 0 0 chr2 180398290 180398587 -72857996 - AluSx SINE Alu -15 297 1 1937 136 16 19 chr2 180398587 180398895 -72857688 - AluJo SINE Alu -5 307 1 2287 109 0 0 chr2 180399722 180400024 -72856559 - AluSx SINE Alu -10 302 1 1237 208 58 70 chr2 180400143 180400456 -72856127 - MLT1G LTR MaLR 0 590 282 221 120 0 40 chr2 180400484 180400534 -72856049 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 295 232 43 137 chr2 180400825 180401036 -72855547 - L1MC4a LINE L1 -1902 5906 5716 1145 143 6 0 chr2 180401151 180401326 -72855257 - AluSg/x SINE Alu 0 312 137 383 264 8 0 chr2 180401379 180401508 -72855075 + GA-rich Low_complexity Low_complexity 1 130 0 720 253 87 12 chr2 180401515 180401756 -72854827 - L1MC4a LINE L1 -2220 5588 5330 902 185 94 54 chr2 180402094 180402247 -72854336 + L1MC5 LINE L1 7603 7748 -213 1902 142 10 20 chr2 180402247 180402549 -72854034 + AluJb SINE Alu 1 299 -13 902 185 94 54 chr2 180402549 180402692 -72853891 + L1MC5 LINE L1 7748 7911 -50 252 283 87 11 chr2 180402767 180402859 -72853724 + L2 LINE L2 3193 3291 -22 198 0 0 0 chr2 180405076 180405098 -72851485 + (T)n Simple_repeat Simple_repeat 1 22 0 503 229 12 5 chr2 180405179 180405200 -72851383 + L1MA9 LINE L1 6131 6150 -150 360 0 0 0 chr2 180405200 180405240 -72851343 + (CA)n Simple_repeat Simple_repeat 1 40 0 503 229 12 5 chr2 180405240 180405351 -72851232 + L1MA9 LINE L1 6150 6276 -24 386 275 242 2 chr2 180405928 180406117 -72850466 + MIR SINE MIR 10 244 -18 244 276 146 72 chr2 180406274 180406719 -72849864 + L2 LINE L2 2013 2490 -824 302 318 44 48 chr2 180406898 180407354 -72849229 - L1MC5 LINE L1 -30 7931 7478 205 296 0 0 chr2 180407357 180407401 -72849182 + L2 LINE L2 2715 2758 -556 233 57 29 0 chr2 180407630 180407665 -72848918 + (TGGA)n Simple_repeat Simple_repeat 3 38 0 1421 175 98 3 chr2 180407931 180408216 -72848367 - AluJb SINE Alu 0 312 1 2266 105 3 0 chr2 180410102 180410396 -72846187 - AluSx SINE Alu -17 295 1 345 270 132 40 chr2 180410473 180410647 -72845936 + MIR SINE MIR 71 260 -2 2009 113 3 78 chr2 180411772 180412107 -72844476 - AluYb8 SINE Alu -8 310 1 270 0 0 0 chr2 180412416 180412446 -72844137 + (CA)n Simple_repeat Simple_repeat 2 31 0 525 248 207 14 chr2 180412446 180412761 -72843822 + AluJb SINE Alu 137 479 0 701 169 6 17 chr2 180412761 180412939 -72843644 + GA-rich Low_complexity Low_complexity 2 177 0 258 32 0 0 chr2 180413385 180413416 -72843167 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2235 104 0 0 chr2 180413420 180413698 -72842885 - AluSc SINE Alu -31 278 1 1035 154 6 0 chr2 180414326 180414482 -72842101 + FRAM SINE Alu 9 165 -11 278 194 14 0 chr2 180416218 180416290 -72840293 + (TA)n Simple_repeat Simple_repeat 1 73 0 578 305 28 19 chr2 180416645 180416858 -72839725 + MIR SINE MIR 21 235 -27 341 336 42 46 chr2 180417364 180417602 -72838981 - L3 LINE CR1 -741 836 600 300 287 23 0 chr2 180417866 180417953 -72838630 + MIR SINE MIR 59 147 -115 24 53 0 0 chr2 180417992 180418030 -72838553 + GC_rich Low_complexity Low_complexity 1 38 0 182 31 0 62 chr2 180418811 180418843 -72837740 + (CCCCCA)n Simple_repeat Simple_repeat 1 30 0 431 239 80 0 chr2 180419299 180419437 -72837146 - Charlie2 DNA MER1_type -221 2641 2493 343 239 88 18 chr2 180419463 180419576 -72837007 - MLT1J LTR MaLR -16 495 375 1024 234 87 29 chr2 180419578 180420026 -72836557 - Charlie2 DNA MER1_type -356 2506 2033 784 248 87 0 chr2 180420051 180420269 -72836314 - L2 LINE L2 -706 2608 2372 2352 92 0 3 chr2 180420976 180421279 -72835304 - AluSx SINE Alu -10 302 1 331 370 85 26 chr2 180421292 180421481 -72835102 - L2 LINE L2 -5 3267 3068 1855 163 0 0 chr2 180421723 180422012 -72834571 + AluJb SINE Alu 1 289 -23 1708 141 15 4 chr2 180422930 180423192 -72833391 + AluSx SINE Alu 16 280 -32 482 280 16 11 chr2 180423509 180423695 -72832888 - L1MDa LINE L1 -4455 2085 1899 10746 160 86 49 chr2 180423696 180423746 -72832837 - L1MC3 LINE L1 -142 7643 7596 1723 160 0 72 chr2 180423746 180424065 -72832518 + AluJo SINE Alu 1 296 -16 10746 160 86 49 chr2 180424065 180424468 -72832115 - L1MC3 LINE L1 -189 7596 7209 257 272 0 37 chr2 180424468 180424549 -72832034 - MLT1F1 LTR MaLR -442 125 48 10746 160 86 49 chr2 180424549 180425043 -72831540 - L1MC3 LINE L1 -576 7209 6734 282 29 0 0 chr2 180425043 180425078 -72831505 + (CA)n Simple_repeat Simple_repeat 2 36 0 10746 160 86 49 chr2 180425078 180426866 -72829717 - L1MC3 LINE L1 -1051 6734 4740 1178 176 24 0 chr2 180426866 180427076 -72829507 - L1MC3 LINE L1 -305 7480 7266 * 2256 216 63 29 chr2 180427072 180427128 -72829455 - L1MC3 LINE L1 -1410 4736 4683 2459 128 86 8 chr2 180427128 180427525 -72829058 + MSTA LTR MaLR 1 428 0 2256 216 63 29 chr2 180427525 180428099 -72828484 - L1MC3 LINE L1 -1463 4683 4084 236 204 65 65 chr2 180428142 180428250 -72828333 - L1ME LINE L1 -287 5834 5727 305 373 15 0 chr2 180428252 180428386 -72828197 + MIR SINE MIR 113 248 -14 918 228 35 27 chr2 180428507 180428766 -72827817 + MIR SINE MIR 2 262 0 1145 114 154 0 chr2 180428847 180429003 -72827580 - L1MA7 LINE L1 -7 6284 6089 603 60 0 60 chr2 180429003 180429087 -72827496 - MADE1 DNA Mariner -1 79 1 1145 114 154 0 chr2 180429087 180429131 -72827452 - L1MA7 LINE L1 -202 6089 6053 411 312 154 27 chr2 180429285 180429485 -72827098 - L2 LINE L2 -1 3312 3139 1246 231 28 28 chr2 180429485 180429809 -72826774 - MER33 DNA MER1_type 0 324 1 411 312 154 27 chr2 180429809 180430127 -72826456 - L2 LINE L2 -174 3139 2712 382 208 167 0 chr2 180430246 180430366 -72826217 + MIR SINE MIR 121 260 -2 414 313 132 19 chr2 180432740 180433158 -72823425 + L1ME4a LINE L1 5573 6037 -84 184 347 138 24 chr2 180433320 180433611 -72822972 + L2 LINE L2 2836 3159 -113 1110 241 140 14 chr2 180434652 180435134 -72821449 - L1ME3A LINE L1 -16 6150 5593 2865 77 3 0 chr2 180435431 180435783 -72820800 + L1PA13 LINE L1 5792 6144 -19 21 36 0 0 chr2 180437279 180437307 -72819276 + AT_rich Low_complexity Low_complexity 1 28 0 465 252 213 13 chr2 180437766 180437921 -72818662 + MER5A DNA MER1_type 4 189 0 188 280 93 25 chr2 180438028 180438146 -72818437 - L3b LINE CR1 -240 1343 1218 870 259 143 21 chr2 180438198 180438792 -72817791 - L2 LINE L2 -1 3312 2584 370 175 38 0 chr2 180438794 180438874 -72817709 + MER3 DNA MER1_type 74 156 -53 797 161 0 0 chr2 180438899 180439011 -72817572 - FRAM SINE Alu -72 104 1 215 178 79 0 chr2 180440004 180440105 -72816478 + (TA)n Simple_repeat Simple_repeat 2 110 0 381 191 40 13 chr2 180440116 180440268 -72816315 + (TA)n Simple_repeat Simple_repeat 1 156 0 1380 257 86 45 chr2 180440716 180441250 -72815333 - L1MCb LINE L1 -5484 561 6 424 253 170 13 chr2 180442915 180443215 -72813368 + LTR33A LTR ERVL 176 522 -1 2570 52 0 3 chr2 180443291 180443598 -72812985 - AluY SINE Alu -5 306 1 268 303 50 25 chr2 180443860 180443979 -72812604 + MIR3 SINE MIR 36 157 -51 1762 201 121 37 chr2 180445920 180446383 -72810200 - MLT1D LTR MaLR -3 502 1 1764 141 18 28 chr2 180446635 180446919 -72809664 + AluJo SINE Alu 1 281 -31 24 0 0 0 chr2 180447364 180447388 -72809195 + AT_rich Low_complexity Low_complexity 1 24 0 24 53 0 0 chr2 180447462 180447500 -72809083 + AT_rich Low_complexity Low_complexity 1 38 0 605 291 63 22 chr2 180448364 180448606 -72807977 - MIR SINE MIR -6 256 7 473 219 98 41 chr2 180448606 180448729 -72807854 - L2 LINE L2 0 3313 3184 2135 149 128 10 chr2 180449716 180450099 -72806484 - MSTA LTR MaLR 0 428 1 349 279 22 117 chr2 180451177 180451356 -72805227 - MIR3 SINE MIR -14 194 33 539 256 160 0 chr2 180453176 180453332 -72803251 - MER5A DNA MER1_type 0 189 9 283 315 66 38 chr2 180456051 180456264 -72800319 - L2 LINE L2 -19 3294 3076 228 67 0 0 chr2 180456343 180456373 -72800210 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 212 296 0 0 chr2 180456464 180456508 -72800075 - L2 LINE L2 -87 3185 3142 218 211 0 58 chr2 180456529 180456581 -72800002 - L2 LINE L2 -8 3264 3216 378 225 67 17 chr2 180459649 180459769 -72796814 - L1ME4a LINE L1 -30 6091 5966 229 312 109 7 chr2 180459779 180459917 -72796666 - L1ME4a LINE L1 -236 5885 5734 2072 156 0 0 chr2 180459930 180460237 -72796346 - AluJo SINE Alu 0 312 6 287 315 112 37 chr2 180460301 180460596 -72795987 - L2 LINE L2 -340 2974 2658 677 269 116 21 chr2 180460890 180461134 -72795449 - MIR SINE MIR -4 258 2 1811 184 3 0 chr2 180461231 180461524 -72795059 + AluJb SINE Alu 1 294 -18 592 158 0 0 chr2 180461864 180461959 -72794624 - MER53 DNA DNA 0 189 95 228 302 47 47 chr2 180462208 180462357 -72794226 - MIR SINE MIR -86 176 28 307 265 143 10 chr2 180466273 180466371 -72790212 - MIR SINE MIR -54 208 98 1796 127 4 8 chr2 180466563 180466830 -72789753 + AluSq SINE Alu 1 266 -47 280 317 0 42 chr2 180466889 180467031 -72789552 - L2 LINE L2 -302 2970 2835 193 336 207 7 chr2 180467068 180467363 -72789220 - L2 LINE L2 -927 2387 2034 684 184 24 8 chr2 180467650 180467775 -72788808 - FLAM_C SINE Alu -14 129 3 2176 118 6 16 chr2 180473512 180473826 -72782757 - AluSx SINE Alu -1 311 1 1879 157 37 0 chr2 180473861 180474155 -72782428 + AluJb SINE Alu 2 306 -6 2212 160 12 12 chr2 180474277 180474621 -72781962 - MER2 DNA MER2_type 0 344 1 201 74 0 0 chr2 180476847 180476874 -72779709 + (A)n Simple_repeat Simple_repeat 1 27 0 213 39 0 0 chr2 180477194 180477220 -72779363 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 380 239 32 2 chr2 180478771 180478887 -72777696 - MIR SINE MIR -46 162 39 352 297 34 8 chr2 180481227 180481345 -72775238 + MIR SINE MIR 31 151 -111 411 38 0 0 chr2 180482071 180482124 -72774459 + (TG)n Simple_repeat Simple_repeat 2 54 0 2035 106 11 3 chr2 180482125 180482409 -72774174 - AluSx SINE Alu -26 286 1 2554 154 19 66 chr2 180483830 180484317 -72772266 - MLT1C LTR MaLR -3 464 1 306 305 55 18 chr2 180484838 180485002 -72771581 - L2 LINE L2 -16 3297 3128 842 172 8 0 chr2 180485262 180485390 -72771193 + FRAM SINE Alu 1 129 -47 365 115 0 0 chr2 180485863 180485915 -72770668 - MER66B LTR ERV1 -140 346 295 252 143 0 0 chr2 180487554 180487596 -72768987 + (T)n Simple_repeat Simple_repeat 1 42 0 1922 147 191 6 chr2 180488410 180488771 -72767812 - MSTA LTR MaLR 0 428 1 198 0 0 0 chr2 180488823 180488845 -72767738 + (A)n Simple_repeat Simple_repeat 1 22 0 252 348 61 24 chr2 180490815 180490979 -72765604 - MIR SINE MIR -79 183 14 502 194 99 50 chr2 180491248 180491449 -72765134 - L1ME4a LINE L1 -71 6050 5840 37 76 0 0 chr2 180491574 180491653 -72764930 + AT_rich Low_complexity Low_complexity 1 79 0 181 405 0 0 chr2 180491769 180491853 -72764730 - L2 LINE L2 -9 3263 3180 416 256 100 74 chr2 180491855 180492125 -72764458 - L1ME LINE L1 -298 5823 5547 180 0 0 0 chr2 180492325 180492345 -72764238 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2430 91 0 0 chr2 180492350 180492648 -72763935 - AluSc SINE Alu -9 300 3 426 295 84 18 chr2 180493881 180494047 -72762536 - MIR SINE MIR -80 182 6 585 284 149 22 chr2 180494369 180494591 -72761992 - MIR SINE MIR -8 254 5 392 281 88 68 chr2 180494657 180494785 -72761798 + MIR SINE MIR 11 146 -116 2006 146 70 20 chr2 180494785 180495142 -72761441 + THE1C LTR MaLR 1 375 0 392 281 88 68 chr2 180495142 180495205 -72761378 + MIR SINE MIR 146 206 -56 596 124 0 33 chr2 180496312 180496483 -72760100 + MER46A DNA MER2_type 1 233 -3 416 320 66 11 chr2 180496830 180497011 -72759572 + MIR3 SINE MIR 17 207 -1 351 0 0 0 chr2 180498000 180498039 -72758544 + (CA)n Simple_repeat Simple_repeat 1 39 0 227 309 106 0 chr2 180498167 180498261 -72758322 + MIR SINE MIR 36 139 -123 260 306 0 0 chr2 180498481 180498553 -72758030 + L2 LINE L2 3197 3268 -4 556 314 18 12 chr2 180499434 180499603 -72756980 - MIR3 SINE MIR -6 202 33 207 313 122 17 chr2 180500134 180500249 -72756334 + MIR SINE MIR 20 146 -62 249 191 0 0 chr2 180500474 180500521 -72756062 + L2 LINE L2 3267 3313 0 335 262 71 49 chr2 180500802 180500985 -72755598 - LTR33 LTR ERVL 0 521 335 253 262 28 28 chr2 180501578 180501685 -72754898 - L1ME4a LINE L1 -56 6065 5959 249 303 169 28 chr2 180501865 180502007 -72754576 - L1ME4a LINE L1 -2048 5760 5599 460 230 65 60 chr2 180502857 180503057 -72753526 - L1MB4 LINE L1 -1 6179 5979 184 292 0 21 chr2 180503748 180503796 -72752787 + MIR SINE MIR 26 72 -190 225 317 200 21 chr2 180506170 180506315 -72750268 - L2 LINE L2 0 3272 3102 585 261 87 66 chr2 180506534 180506913 -72749670 + L2 LINE L2 2927 3313 0 1339 65 0 0 chr2 180508272 180508440 -72748143 + AluY SINE Alu 137 304 -7 186 314 7 73 chr2 180509755 180509892 -72746691 - L2 LINE L2 0 3313 3186 254 241 9 41 chr2 180510034 180510117 -72746466 + MIR SINE MIR 108 189 -19 2877 10 0 0 chr2 180511036 180511346 -72745237 - AluYa5 SINE Alu -1 310 1 368 276 58 26 chr2 180511396 180511552 -72745031 - MIR SINE MIR -32 230 70 2328 104 0 0 chr2 180512260 180512567 -72744016 - AluSx SINE Alu 0 312 6 24 0 0 0 chr2 180515380 180515404 -72741179 + AT_rich Low_complexity Low_complexity 1 24 0 222 366 30 10 chr2 180515735 180515836 -72740747 - MIR SINE MIR -86 122 20 745 223 23 50 chr2 180518973 180519193 -72737390 - MER20 DNA MER1_type -5 214 1 275 311 76 8 chr2 180520068 180520187 -72736396 + MIR3 SINE MIR 15 141 -67 433 270 32 24 chr2 180520197 180520323 -72736260 - L2 LINE L2 -4 3309 3183 1794 163 3 0 chr2 180521421 180521703 -72734880 + AluJb SINE Alu 1 283 -29 333 0 0 0 chr2 180521703 180521740 -72734843 + (CA)n Simple_repeat Simple_repeat 2 38 0 2433 128 22 66 chr2 180521804 180521882 -72734701 - Tigger2a DNA MER2_type -2274 434 354 1343 184 80 70 chr2 180521882 180522056 -72734527 - AluJo SINE Alu 0 302 122 2445 66 0 10 chr2 180522056 180522358 -72734225 + AluY SINE Alu 1 299 -12 1343 184 80 70 chr2 180522358 180522482 -72734101 - AluJo SINE Alu -180 122 1 2433 128 22 66 chr2 180522482 180522857 -72733726 - Tigger2a DNA MER2_type -2354 354 1 21 82 0 0 chr2 180524008 180524057 -72732526 + AT_rich Low_complexity Low_complexity 1 49 0 834 177 0 7 chr2 180524067 180524214 -72732369 - FRAM SINE Alu -30 146 1 223 259 100 11 chr2 180524540 180524658 -72731925 + MIR SINE MIR 19 150 -63 2196 54 25 0 chr2 180525292 180525594 -72730989 + L1PA8 LINE L1 5864 6172 0 666 259 153 26 chr2 180525922 180526005 -72730578 - MLT1J LTR MaLR -18 493 422 2366 63 7 26 chr2 180526005 180526307 -72730276 + AluY SINE Alu 1 296 -15 666 259 153 26 chr2 180526307 180526536 -72730047 - MLT1J LTR MaLR -89 422 141 2276 107 7 0 chr2 180526737 180527036 -72729547 + AluSq SINE Alu 1 301 -12 21 36 0 0 chr2 180527842 180527870 -72728713 + AT_rich Low_complexity Low_complexity 1 28 0 500 246 35 147 chr2 180528608 180529010 -72727573 + L2 LINE L2 2920 3276 -37 297 270 0 0 chr2 180529014 180529077 -72727506 + L2 LINE L2 3246 3308 -5 2133 113 31 0 chr2 180529183 180529474 -72727109 + AluSg SINE Alu 3 302 -8 973 212 102 140 chr2 180530756 180531147 -72725436 - MER66A LTR ERV1 -10 601 106 689 280 154 115 chr2 180532006 180532416 -72724167 + L3 LINE CR1 821 1332 -245 384 95 111 0 chr2 180532416 180532479 -72724104 - MER41B LTR ERV1 -307 328 259 689 280 154 115 chr2 180532479 180532713 -72723870 + L3 LINE CR1 1332 1555 -22 411 222 94 80 chr2 180534266 180534504 -72722079 + L1ME4a LINE L1 5825 6069 -52 2668 40 0 0 chr2 180534504 180534805 -72721778 - AluY SINE Alu -10 301 1 411 222 94 80 chr2 180534805 180534854 -72721729 + L1ME4a LINE L1 6069 6116 -5 27 62 0 0 chr2 180536049 180536097 -72720486 + AT_rich Low_complexity Low_complexity 1 48 0 513 247 57 70 chr2 180537514 180537741 -72718842 + MER102b DNA MER1_type 83 306 -35 22 35 0 0 chr2 180539562 180539591 -72716992 + AT_rich Low_complexity Low_complexity 1 29 0 2688 172 11 13 chr2 180539792 180540264 -72716319 - L1MB7 LINE L1 -16 6168 5698 360 200 48 48 chr2 180540505 180540610 -72715973 - MER103 DNA DNA -2 164 60 197 0 71 0 chr2 180541884 180541912 -72714671 + (TTCA)n Simple_repeat Simple_repeat 4 33 0 2347 99 3 0 chr2 180542044 180542346 -72714237 + AluSc SINE Alu 2 304 -5 348 299 153 4 chr2 180542387 180542631 -72713952 - L2 LINE L2 -194 3078 2788 2576 161 15 2 chr2 180542905 180543450 -72713133 - L1MB4 LINE L1 0 6180 5552 967 276 35 30 chr2 180544521 180544890 -72711693 - MLT2C2 LTR ERVL -11 453 83 1040 277 29 59 chr2 180544901 180545412 -72711171 - MLT1H LTR MaLR -6 543 3 234 237 53 40 chr2 180545603 180545679 -72710904 - MER91 DNA MER1_type 0 196 114 344 238 156 50 chr2 180545755 180545915 -72710668 + MIR SINE MIR 79 255 -7 435 311 156 9 chr2 180547051 180547263 -72709320 - MIR SINE MIR -12 250 8 1891 175 3 0 chr2 180548158 180548461 -72708122 + AluJo SINE Alu 1 304 -8 586 75 0 0 chr2 180548561 180548641 -72707942 - MADE1 DNA Mariner 0 80 1 216 0 0 0 chr2 180548909 180548933 -72707650 + (TA)n Simple_repeat Simple_repeat 2 25 0 * 369 0 0 0 chr2 180548932 180548973 -72707610 + (TG)n Simple_repeat Simple_repeat 2 42 0 2127 113 0 10 chr2 180548979 180549294 -72707289 - AluSq SINE Alu 0 312 1 2524 50 3 0 chr2 180549415 180549715 -72706868 + AluY SINE Alu 1 301 -10 324 250 86 35 chr2 180549994 180550110 -72706473 + HAL1 LINE L1 811 932 -1575 200 188 0 0 chr2 180550125 180550157 -72706426 + (CAA)n Simple_repeat Simple_repeat 2 33 0 717 241 74 10 chr2 180550193 180550410 -72706173 - MIR SINE MIR 0 262 34 2514 59 0 13 chr2 180550430 180550735 -72705848 - AluSp SINE Alu -11 302 2 276 130 0 0 chr2 180551469 180551515 -72705068 + (TG)n Simple_repeat Simple_repeat 1 46 0 1823 160 21 0 chr2 180552015 180552302 -72704281 + AluSx SINE Alu 5 297 -15 261 308 17 25 chr2 180552698 180552818 -72703765 - MIR SINE MIR -56 206 88 1794 167 0 20 chr2 180553206 180553500 -72703083 + AluJo SINE Alu 1 288 -24 432 0 0 0 chr2 180553504 180553552 -72703031 + (TA)n Simple_repeat Simple_repeat 1 48 0 36 53 0 0 chr2 180553571 180553628 -72702955 + AT_rich Low_complexity Low_complexity 1 57 0 21 0 0 0 chr2 180553733 180553754 -72702829 + AT_rich Low_complexity Low_complexity 1 21 0 257 369 20 7 chr2 180554135 180554284 -72702299 + L3 LINE CR1 648 798 -779 331 274 21 11 chr2 180555874 180555969 -72700614 + MIR SINE MIR 58 153 -109 1439 171 45 8 chr2 180556335 180556581 -72700002 - AluJb SINE Alu -19 293 39 891 336 111 18 chr2 180556874 180557323 -72699260 - L3 LINE CR1 -820 757 267 2284 110 0 0 chr2 180557453 180557745 -72698838 + AluSg SINE Alu 1 292 -18 192 301 0 97 chr2 180557935 180558028 -72698555 - MIR3 SINE MIR -123 85 2 1653 149 187 31 chr2 180558084 180558416 -72698167 + Charlie1b DNA MER1_type 4 425 -2336 2219 97 0 20 chr2 180558416 180558716 -72697867 - AluSg SINE Alu -16 294 1 1653 149 187 31 chr2 180558716 180558832 -72697751 + Charlie1b DNA MER1_type 425 522 -1 386 304 68 37 chr2 180558856 180559047 -72697536 + MIR SINE MIR 66 262 0 655 320 116 48 chr2 180559090 180559487 -72697096 + L2 LINE L2 2845 3268 -4 369 291 133 18 chr2 180560738 180560903 -72695680 - MIR3 SINE MIR -5 203 20 244 324 155 55 chr2 180561162 180561508 -72695075 + L2 LINE L2 2157 2467 -847 1650 170 83 0 chr2 180561508 180561796 -72694787 - AluJb SINE Alu 0 312 1 244 324 155 55 chr2 180561796 180562183 -72694400 + L2 LINE L2 2467 2964 -350 22 70 0 0 chr2 180562761 180562804 -72693779 + GC_rich Low_complexity Low_complexity 1 43 0 24 0 0 0 chr2 180562988 180563012 -72693571 + GC_rich Low_complexity Low_complexity 1 24 0 219 69 0 0 chr2 180563012 180563041 -72693542 + (CGAG)n Simple_repeat Simple_repeat 2 30 0 180 0 0 0 chr2 180564209 180564229 -72692354 + (A)n Simple_repeat Simple_repeat 1 20 0 248 0 31 0 chr2 180565013 180565045 -72691538 + (TTTTTG)n Simple_repeat Simple_repeat 4 36 0 389 282 105 17 chr2 180565697 180565838 -72690745 + MIR SINE MIR 29 191 -71 6865 128 47 32 chr2 180565838 180567050 -72689533 - Tigger3b DNA MER2_type 0 1231 2 389 282 105 17 chr2 180567050 180567089 -72689494 + MIR SINE MIR 191 225 -37 774 204 101 38 chr2 180567170 180567521 -72689062 - MSTD LTR MaLR 0 396 1 26 30 0 0 chr2 180567902 180567935 -72688648 + AT_rich Low_complexity Low_complexity 1 33 0 700 218 0 0 chr2 180568022 180568155 -72688428 - FLAM_A SINE Alu 0 133 1 1406 179 60 24 chr2 180568849 180569101 -72687482 - AluJo SINE Alu -15 297 37 1211 128 16 5 chr2 180570176 180570364 -72686219 - AluJo SINE Alu -3 309 120 639 176 118 0 chr2 180570919 180571038 -72685545 - AluJo SINE Alu -169 133 1 21 0 0 0 chr2 180571045 180571066 -72685517 + AT_rich Low_complexity Low_complexity 1 21 0 188 238 392 0 chr2 180571615 180571749 -72684834 - MIR SINE MIR -12 250 63 2308 125 0 0 chr2 180572614 180572925 -72683658 - AluSx SINE Alu -1 311 1 324 244 38 76 chr2 180573902 180574033 -72682550 - L2 LINE L2 0 3313 3188 2979 246 57 48 chr2 180574290 180575467 -72681116 + HAL1 LINE L1 1283 2469 -38 468 247 105 118 chr2 180576004 180576419 -72680164 - L1MC4 LINE L1 0 8042 7636 2014 120 35 0 chr2 180576419 180576702 -72679881 - AluSx SINE Alu -19 293 1 468 247 105 118 chr2 180576702 180576877 -72679706 - L1MC4 LINE L1 -406 7636 7460 205 306 14 0 chr2 180579275 180579347 -72677236 - MIR SINE MIR -101 161 89 4357 22 2 0 chr2 180580470 180580978 -72675605 + L1PA2 LINE L1 5643 6151 -4 2956 228 73 56 chr2 180580981 180582221 -72674362 - L1MC4 LINE L1 -17 8025 6765 474 227 106 0 chr2 180582351 180582492 -72674091 + L1ME4a LINE L1 5527 5682 -439 347 213 11 11 chr2 180582584 180582678 -72673905 + L1ME4a LINE L1 5826 5919 -202 2273 104 3 0 chr2 180583158 180583467 -72673116 - AluY SINE Alu -1 310 1 1975 95 81 3 chr2 180583928 180584212 -72672371 + AluSc SINE Alu 1 306 -3 21 57 0 0 chr2 180584823 180584858 -72671725 + AT_rich Low_complexity Low_complexity 1 35 0 1915 135 84 0 chr2 180585134 180585467 -72671116 + MER46B DNA MER2_type 1 236 0 1156 142 5 16 chr2 180585638 180585828 -72670755 + MER5A DNA MER1_type 1 188 -1 186 43 0 0 chr2 180586099 180586122 -72670461 + (TTCC)n Simple_repeat Simple_repeat 2 24 0 843 177 54 21 chr2 180586148 180586334 -72670249 - AluJo SINE Alu -1 311 120 517 241 0 23 chr2 180586653 180586786 -72669797 + MIR SINE MIR 123 252 -10 305 261 157 0 chr2 180587094 180587209 -72669374 - MIR SINE MIR -50 212 80 398 275 228 0 chr2 180588726 180588897 -72667686 - L3 LINE CR1 -101 1476 1267 209 385 0 26 chr2 180588904 180588982 -72667601 + L2 LINE L2 3176 3251 -21 1696 99 86 0 chr2 180589670 180589913 -72666670 + AluSq SINE Alu 50 313 0 191 295 39 13 chr2 180590432 180590510 -72666073 - MIR SINE MIR -3 259 180 433 333 37 7 chr2 180590739 180590874 -72665709 - L2 LINE L2 0 3313 3175 2812 203 16 11 chr2 180590929 180591554 -72665029 + L1MD3 LINE L1 7363 7990 -5 1520 282 88 19 chr2 180591554 180592276 -72664307 - L2 LINE L2 -178 3135 2348 2085 155 69 11 chr2 180592313 180592752 -72663831 + L1MB4 LINE L1 5709 6160 -20 1483 246 43 28 chr2 180592787 180593327 -72663256 + L1MC/D LINE L1 4404 4951 -1195 2365 272 138 6 chr2 180593334 180594356 -72662227 - L2 LINE L2 -2026 1288 82 22 35 0 0 chr2 180594371 180594400 -72662183 + AT_rich Low_complexity Low_complexity 1 29 0 706 296 82 4 chr2 180594447 180594680 -72661903 + MIR SINE MIR 2 252 -10 2343 73 23 0 chr2 180594957 180595259 -72661324 - AluSp SINE Alu -3 310 2 242 322 60 16 chr2 180595410 180595593 -72660990 + L1MC/D LINE L1 5454 5644 -2164 470 49 49 0 chr2 180596990 180597072 -72659511 + (TA)n Simple_repeat Simple_repeat 2 87 0 1275 144 0 0 chr2 180597072 180597252 -72659331 - AluJb SINE Alu -1 311 132 11447 183 29 10 chr2 180597260 180602688 -72653895 - L1PB1 LINE L1 -4 6863 1332 397 160 227 8 chr2 180602717 180602836 -72653747 - MSTA LTR MaLR -73 355 211 747 171 0 16 chr2 180602858 180602981 -72653602 - FLAM_C SINE Alu -22 121 1 1331 132 97 4 chr2 180602990 180603248 -72653335 - L1MA8 LINE L1 -5 6286 6005 301 179 51 0 chr2 180603698 180603776 -72652807 + Charlie8 DNA MER1_type 77 158 -2259 1730 192 0 3 chr2 180604107 180604409 -72652174 - AluJb SINE Alu -11 301 1 30 45 0 0 chr2 180604409 180604453 -72652130 + AT_rich Low_complexity Low_complexity 1 44 0 744 218 199 73 chr2 180605808 180606481 -72650102 - LTR41 LTR ERVL -15 758 1 201 217 43 0 chr2 180606852 180606898 -72649685 + CT-rich Low_complexity Low_complexity 3 50 0 3120 276 60 35 chr2 180606938 180607528 -72649055 - ERVL LTR ERVL -353 5411 4837 2341 75 7 13 chr2 180607528 180607836 -72648747 - AluSc SINE Alu -3 306 1 3120 276 60 35 chr2 180607836 180608221 -72648362 - ERVL LTR ERVL -927 4837 4463 2450 44 3 3 chr2 180608221 180608516 -72648067 - AluY SINE Alu -16 295 1 3120 276 60 35 chr2 180608516 180609210 -72647373 - ERVL LTR ERVL -1301 4463 3638 1508 292 71 53 chr2 180609203 180610202 -72646381 - ERVL LTR ERVL -3747 2017 1001 * 438 323 69 27 chr2 180610408 180610742 -72645841 - ERVL LTR ERVL -5066 698 351 285 282 14 49 chr2 180611074 180611216 -72645367 - LTR41 LTR ERVL -50 723 587 1050 186 11 0 chr2 180611662 180611845 -72644738 + FRAM SINE Alu 1 176 0 318 231 19 28 chr2 180611848 180611956 -72644627 - LTR41 LTR ERVL -666 107 1 2455 88 0 0 chr2 180612483 180612791 -72643792 - AluY SINE Alu -3 308 1 23 0 0 0 chr2 180612974 180612997 -72643586 + AT_rich Low_complexity Low_complexity 1 23 0 2410 109 0 0 chr2 180613197 180613509 -72643074 - AluSx SINE Alu 0 312 1 267 293 103 17 chr2 180614700 180614816 -72641767 - MIR SINE MIR -86 176 51 2005 129 4 0 chr2 180615142 180615461 -72641122 - AluSx SINE Alu 0 320 1 22 0 0 0 chr2 180615656 180615678 -72640905 + AT_rich Low_complexity Low_complexity 1 22 0 2058 97 43 17 chr2 180615746 180616045 -72640538 - AluSq SINE Alu -6 307 1 315 204 153 20 chr2 180616102 180616200 -72640383 - MIR SINE MIR 0 262 152 462 191 151 13 chr2 180616200 180616352 -72640231 - MER104 DNA Tc2 -1 179 7 445 239 62 31 chr2 180616361 180616491 -72640092 - MIR SINE MIR -112 150 17 310 256 8 64 chr2 180616676 180616801 -72639782 + L1ME4a LINE L1 5303 5420 -822 567 292 19 4 chr2 180616890 180617147 -72639436 + L1ME4a LINE L1 5602 5862 -259 192 208 151 19 chr2 180617320 180617373 -72639210 + MIR SINE MIR 88 147 -61 726 267 108 17 chr2 180619505 180619737 -72636846 + MIR SINE MIR 2 254 -8 203 300 143 0 chr2 180619752 180619822 -72636761 + L2 LINE L2 3224 3303 -10 388 229 40 134 chr2 180620433 180620583 -72636000 - MER5A DNA MER1_type -7 182 54 1969 76 0 27 chr2 180620583 180620846 -72635737 + AluY SINE Alu 52 307 -4 388 229 40 134 chr2 180620846 180620896 -72635687 - MER5A DNA MER1_type -135 54 1 545 310 103 23 chr2 180620918 180621023 -72635560 - L3 LINE CR1 -64 1513 1418 1639 131 3 119 chr2 180621023 180621218 -72635365 - AluSx SINE Alu -15 297 156 348 24 0 0 chr2 180621218 180621259 -72635324 + (TA)n Simple_repeat Simple_repeat 2 42 0 1639 131 3 119 chr2 180621259 180621399 -72635184 - AluSx SINE Alu -156 156 1 545 310 103 23 chr2 180621399 180621593 -72634990 - L3 LINE CR1 -159 1418 1190 568 234 42 13 chr2 180621701 180621893 -72634690 + MIR SINE MIR 13 257 -5 424 343 181 28 chr2 180622085 180622449 -72634134 + L3 LINE CR1 632 1051 -526 241 320 72 10 chr2 180622442 180622539 -72634044 + MIR SINE MIR 48 150 -112 * 2071 123 0 17 chr2 180624797 180625097 -72631486 - AluSg SINE Alu -14 296 2 192 200 0 123 chr2 180625386 180625451 -72631132 - MIR3 SINE MIR -49 159 103 499 292 73 36 chr2 180626061 180626253 -72630330 - L3 LINE CR1 -6 1571 1373 2226 89 7 0 chr2 180626833 180627139 -72629444 - AluSq SINE Alu 0 308 1 2116 126 3 7 chr2 180627185 180627479 -72629104 - AluSp SINE Alu -20 293 1 852 196 32 7 chr2 180627549 180627833 -72628750 + L1MD2 LINE L1 6030 6359 0 24 53 0 0 chr2 180627975 180628013 -72628570 + AT_rich Low_complexity Low_complexity 1 38 0 1148 257 141 56 chr2 180628101 180629021 -72627562 + L1ME2 LINE L1 1468 2671 -4286 2289 92 3 0 chr2 180629021 180629316 -72627267 + AluY SINE Alu 1 296 -15 1148 257 141 56 chr2 180629316 180629709 -72626874 + L1ME2 LINE L1 2671 3029 -3928 1038 177 0 0 chr2 180629709 180629884 -72626699 + FRAM SINE Alu 1 174 -2 1198 199 24 40 chr2 180629885 180630257 -72626326 + L1ME2 LINE L1 3016 3381 -3576 370 219 0 0 chr2 180630258 180630331 -72626252 + L1ME2 LINE L1 3467 3539 -3418 1779 198 52 14 chr2 180630359 180630844 -72625739 + L1ME2 LINE L1 4809 5311 -1646 732 153 0 0 chr2 180630859 180630977 -72625606 + AluJb SINE Alu 17 134 -178 341 169 0 13 chr2 180630977 180631011 -72625572 + A-rich Low_complexity Low_complexity 3 36 -42 2563 68 0 0 chr2 180631011 180631320 -72625263 + AluY SINE Alu 1 309 -2 341 169 0 13 chr2 180631320 180631362 -72625221 + A-rich Low_complexity Low_complexity 36 78 0 1015 171 0 11 chr2 180631362 180631537 -72625046 + AluJb SINE Alu 120 292 -20 2501 226 86 37 chr2 180631537 180632041 -72624542 + L1ME2 LINE L1 5303 5781 -1194 376 74 0 0 chr2 180632041 180632095 -72624488 + Alu SINE Alu 246 299 -1 2501 226 86 37 chr2 180632095 180633030 -72623553 + L1ME2 LINE L1 5781 6967 -8 1166 186 19 19 chr2 180633231 180633500 -72623083 - L1MB8 LINE L1 -15 6163 5895 1967 197 45 9 chr2 180633500 180634230 -72622353 - L1MB8 LINE L1 -486 5692 4931 348 227 13 0 chr2 180634234 180634309 -72622274 - MLT1J LTR MaLR -335 176 101 2518 61 0 0 chr2 180634419 180634714 -72621869 - AluSc SINE Alu -14 295 1 283 214 57 0 chr2 180635937 180636007 -72620576 - MIR SINE MIR -6 256 183 960 147 198 7 chr2 180636100 180636350 -72620233 + L1MD3 LINE L1 6247 6344 0 2145 118 10 0 chr2 180637402 180637691 -72618892 - AluSg SINE Alu -18 292 1 293 330 183 15 chr2 180637723 180637920 -72618663 - MIR SINE MIR -2 260 31 533 224 0 0 chr2 180637967 180638083 -72618500 + L1M4 LINE L1 5484 5599 -579 345 191 0 101 chr2 180638083 180638172 -72618411 + MER5B DNA MER1_type 15 94 -84 303 352 76 0 chr2 180638180 180638325 -72618258 - MIR3 SINE MIR -15 193 38 651 296 123 0 chr2 180638501 180638721 -72617862 + MIR SINE MIR 15 261 -1 292 266 113 24 chr2 180640318 180640442 -72616141 + L3 LINE CR1 1440 1574 -3 987 249 99 3 chr2 180640500 180640813 -72615770 + MER2 DNA MER2_type 2 344 0 2023 147 10 0 chr2 180641018 180641310 -72615273 - AluSx SINE Alu -17 295 1 577 267 19 19 chr2 180642169 180642330 -72614253 + L2 LINE L2 3150 3310 -3 325 262 147 92 chr2 180642698 180643133 -72613450 + MLT1J LTR MaLR 36 494 -17 2135 103 3 7 chr2 180643273 180643583 -72613000 - MER1B DNA MER1_type 0 339 31 379 215 13 0 chr2 180643816 180643895 -72612688 - Tigger2 DNA MER2_type 0 2718 2639 188 269 58 0 chr2 180644065 180644117 -72612466 + MIR3 SINE MIR 153 207 -1 472 250 98 37 chr2 180644826 180645070 -72611513 + MIR SINE MIR 4 262 0 524 265 59 0 chr2 180645580 180645716 -72610867 - MIR SINE MIR -96 166 23 200 184 0 0 chr2 180645741 180645779 -72610804 - L2 LINE L2 -4 3309 3272 215 302 31 10 chr2 180645816 180645912 -72610671 - MIR3 SINE MIR -13 195 98 197 65 32 0 chr2 180646180 180646211 -72610372 + (TTTCC)n Simple_repeat Simple_repeat 3 34 0 1828 172 26 0 chr2 180646213 180646516 -72610067 - AluJb SINE Alu -1 311 1 23 0 0 0 chr2 180647246 180647269 -72609314 + AT_rich Low_complexity Low_complexity 1 23 0 338 264 174 35 chr2 180648852 180648996 -72607587 - L1ME4a LINE L1 -3 6118 5955 2464 86 0 0 chr2 180649230 180649533 -72607050 + AluSq SINE Alu 1 303 -10 2461 106 14 3 chr2 180649955 180650313 -72606270 - L1PA15 LINE L1 -8 6157 5796 457 111 0 0 chr2 180650314 180650377 -72606206 - L1PA15 LINE L1 -307 5858 5796 * 4006 86 24 57 chr2 180650376 180650789 -72605794 - L1PA15 LINE L1 -305 5860 5481 2070 89 4 0 chr2 180650789 180651058 -72605525 - AluSg SINE Alu -14 296 27 4006 86 24 57 chr2 180651058 180651404 -72605179 - L1PA15 LINE L1 -684 5481 5125 1899 103 0 31 chr2 180651986 180652247 -72604336 + AluSx SINE Alu 34 286 -26 2291 185 19 31 chr2 180652429 180652502 -72604081 - L1MB4 LINE L1 0 6180 6108 1877 157 3 17 chr2 180652502 180652802 -72603781 - AluJb SINE Alu -16 296 1 2291 185 19 31 chr2 180652802 180653248 -72603335 - L1MB4 LINE L1 -72 6108 5667 2603 42 0 10 chr2 180653729 180654041 -72602542 - AluY SINE Alu -2 309 1 55 62 0 0 chr2 180654875 180654972 -72601611 + AT_rich Low_complexity Low_complexity 1 97 0 1888 145 14 10 chr2 180656265 180656555 -72600028 + AluJo SINE Alu 1 291 -21 414 305 73 0 chr2 180657521 180657672 -72598911 - MIR SINE MIR -38 224 63 396 305 93 20 chr2 180659238 180659389 -72597194 + MIR3 SINE MIR 6 167 -41 2276 90 23 0 chr2 180659617 180659916 -72596667 - AluSc SINE Alu -3 306 1 408 20 0 0 chr2 180659981 180660030 -72596553 + (TG)n Simple_repeat Simple_repeat 2 50 0 4312 50 2 9 chr2 180661036 180661580 -72595003 - L1PA7 LINE L1 -7 6147 5608 10708 214 54 41 chr2 180663194 180664270 -72592313 + L1MB7 LINE L1 1900 2960 -3293 2115 74 67 14 chr2 180664270 180664553 -72592030 - AluSx SINE Alu -11 301 4 10708 214 54 41 chr2 180664553 180665189 -72591394 + L1MB7 LINE L1 2960 3586 -2667 1986 133 7 0 chr2 180665189 180665475 -72591108 + AluSx SINE Alu 1 288 -24 10708 214 54 41 chr2 180665475 180665939 -72590644 + L1MB7 LINE L1 3586 4042 -2211 2371 87 3 13 chr2 180665939 180666249 -72590334 + AluY SINE Alu 1 307 -4 10708 214 54 41 chr2 180666249 180666532 -72590051 + L1MB7 LINE L1 4042 4320 -1933 324 0 0 0 chr2 180666532 180666568 -72590015 + (CA)n Simple_repeat Simple_repeat 1 36 0 10708 214 54 41 chr2 180666568 180667218 -72589365 + L1MB7 LINE L1 4320 4960 -1293 1798 155 3 44 chr2 180667218 180667534 -72589049 + AluJb SINE Alu 1 303 -9 10708 214 54 41 chr2 180667534 180668064 -72588519 + L1MB7 LINE L1 4960 5481 -772 504 197 7 92 chr2 180668064 180668206 -72588377 + FLAM_A SINE Alu 1 130 -3 10708 214 54 41 chr2 180668206 180668594 -72587989 + L1MB7 LINE L1 5481 5954 -299 1626 150 0 90 chr2 180668594 180668928 -72587655 + AluJo SINE Alu 1 304 -8 10708 214 54 41 chr2 180668928 180669211 -72587372 + L1MB7 LINE L1 5954 6232 -21 1797 128 45 21 chr2 180671455 180671745 -72584838 + AluSx SINE Alu 1 297 -15 2225 108 3 0 chr2 180671788 180672084 -72584499 + AluSx SINE Alu 1 297 -15 380 246 140 49 chr2 180674539 180674803 -72581780 - L1ME4a LINE L1 -224 5897 5610 22 0 0 0 chr2 180676047 180676069 -72580514 + AT_rich Low_complexity Low_complexity 1 22 0 218 305 232 29 chr2 180676254 180676526 -72580057 + L2 LINE L2 2123 2449 -865 470 328 57 94 chr2 180676603 180677278 -72579305 + L2 LINE L2 2458 3260 -12 219 114 0 0 chr2 180677279 180677314 -72579269 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 192 40 0 0 chr2 180679091 180679116 -72577467 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 577 171 21 57 chr2 180679710 180679850 -72576733 - MER58C DNA MER1_type -9 206 72 205 267 17 0 chr2 180679985 180680045 -72576538 + (TATG)n Simple_repeat Simple_repeat 4 64 0 563 51 13 13 chr2 180681077 180681156 -72575427 - MADE1 DNA Mariner -1 79 1 189 0 0 0 chr2 180682017 180682038 -72574545 + (A)n Simple_repeat Simple_repeat 1 21 0 484 299 108 26 chr2 180683699 180683930 -72572653 + MIR SINE MIR 13 262 0 207 125 0 0 chr2 180686491 180686531 -72570052 + (T)n Simple_repeat Simple_repeat 1 40 0 25 0 0 0 chr2 180686565 180686590 -72569993 + AT_rich Low_complexity Low_complexity 1 25 0 251 122 20 0 chr2 180687408 180687457 -72569126 - L1MD3 LINE L1 -10 7985 7936 1027 167 24 0 chr2 180687458 180687626 -72568957 + AluJb SINE Alu 117 288 -24 1092 83 0 0 chr2 180687627 180687760 -72568823 - AluSq/x SINE Alu -179 133 1 436 252 13 0 chr2 180687788 180687927 -72568656 - L1MD2 LINE L1 -67 7920 6201 23 54 0 0 chr2 180688457 180688494 -72568089 + AT_rich Low_complexity Low_complexity 1 37 0 1741 242 106 34 chr2 180689309 180689987 -72566596 - MER20B DNA MER1_type 0 783 57 28 29 0 0 chr2 180690928 180690963 -72565620 + AT_rich Low_complexity Low_complexity 1 35 0 1006 247 39 0 chr2 180691007 180691238 -72565345 - MIR SINE MIR -21 241 2 730 196 48 29 chr2 180691437 180691646 -72564937 + L1MC5 LINE L1 7719 7931 -30 2640 52 0 0 chr2 180691649 180691958 -72564625 + AluY SINE Alu 1 309 -2 183 80 0 0 chr2 180692409 180692434 -72564149 + (GCTTG)n Simple_repeat Simple_repeat 5 29 0 1883 124 7 4 chr2 180694044 180694319 -72562264 + AluSx SINE Alu 7 282 -30 264 322 33 0 chr2 180694416 180694506 -72562077 + MIR SINE MIR 60 152 -110 1891 153 7 0 chr2 180694945 180695240 -72561343 + AluJo SINE Alu 1 297 -15 778 138 0 0 chr2 180695901 180696031 -72560552 - L1PA15 LINE L1 0 6165 6036 2302 84 3 10 chr2 180696898 180697196 -72559387 + AluSp SINE Alu 1 296 -17 639 197 8 0 chr2 180697981 180698103 -72558480 + FLAM_C SINE Alu 6 128 -15 239 285 62 140 chr2 180698195 180698463 -72558120 + L2 LINE L2 2890 3118 -154 2359 69 7 0 chr2 180698463 180698754 -72557829 + AluY SINE Alu 1 293 -18 239 285 62 140 chr2 180698754 180698885 -72557698 + L2 LINE L2 3118 3258 -14 215 294 57 75 chr2 180698995 180699223 -72557360 - L2 LINE L2 -1 3312 3089 1692 175 19 16 chr2 180699345 180699654 -72556929 + AluJb SINE Alu 1 310 -2 29 0 0 0 chr2 180699867 180699896 -72556687 + AT_rich Low_complexity Low_complexity 1 29 0 242 220 156 28 chr2 180699913 180700022 -72556561 + L1ME4a LINE L1 5981 6103 -18 288 238 212 78 chr2 180700311 180700542 -72556041 - MIR SINE MIR 0 262 1 214 227 0 23 chr2 180703152 180703194 -72553389 - L3 LINE CR1 -11 1566 1526 342 293 15 25 chr2 180703194 180703323 -72553260 + MER5A DNA MER1_type 1 139 -50 189 309 117 0 chr2 180703395 180703489 -72553094 - MIR SINE MIR -89 173 69 283 297 103 40 chr2 180703501 180703676 -72552907 + MIR SINE MIR 65 250 -12 2249 98 0 3 chr2 180706615 180706912 -72549671 + AluSg SINE Alu 1 296 -14 26 0 0 0 chr2 180707589 180707615 -72548968 + AT_rich Low_complexity Low_complexity 1 26 0 195 167 0 0 chr2 180708298 180708340 -72548243 + (ATG)n Simple_repeat Simple_repeat 3 44 0 1207 173 5 18 chr2 180708836 180709056 -72547527 + AluJo SINE Alu 88 304 -8 707 248 92 21 chr2 180710042 180710280 -72546303 + MIR SINE MIR 7 261 -1 818 231 126 25 chr2 180710796 180711082 -72545501 - L2 LINE L2 -2 3311 2997 305 215 111 49 chr2 180711967 180712111 -72544472 + MER20B DNA MER1_type 2 154 -629 2375 101 0 0 chr2 180712140 180712447 -72544136 + AluSx SINE Alu 1 307 -5 21 36 0 0 chr2 180713147 180713175 -72543408 + AT_rich Low_complexity Low_complexity 1 28 0 2048 109 0 4 chr2 180715509 180715783 -72540800 - AluSx SINE Alu -39 273 1 2167 115 21 0 chr2 180716371 180716657 -72539926 + AluSx SINE Alu 1 292 -20 211 287 191 7 chr2 180717335 180717471 -72539112 - MIR3 SINE MIR -32 176 16 2238 121 0 0 chr2 180718146 180718453 -72538130 - AluSx SINE Alu -5 307 1 295 203 14 29 chr2 180718457 180718526 -72538057 - L2 LINE L2 -10 3303 3236 206 359 0 31 chr2 180718678 180718742 -72537841 - L2 LINE L2 -95 3177 3116 1798 171 59 18 chr2 180720694 180720708 -72535875 + L1MB5 LINE L1 5821 5833 -341 2512 105 38 32 chr2 180720708 180721079 -72535504 - MER83C LTR ERV1 0 373 1 1798 171 59 18 chr2 180721079 180721404 -72535179 + L1MB5 LINE L1 5833 6174 0 1994 149 3 10 chr2 180721633 180721941 -72534642 + AluJb SINE Alu 1 306 -6 2358 101 0 7 chr2 180722669 180722976 -72533607 - AluSg SINE Alu -5 305 1 1523 163 61 4 chr2 180723548 180723812 -72532771 + AluJo SINE Alu 16 294 -18 686 230 0 15 chr2 180725785 180725920 -72530663 - MIR SINE MIR -117 145 13 3717 115 66 16 chr2 180726141 180726980 -72529603 + L1MA3 LINE L1 5302 6255 -50 1791 181 0 7 chr2 180726980 180727279 -72529304 + AluJb SINE Alu 1 297 -15 3717 115 66 16 chr2 180727279 180727331 -72529252 + L1MA3 LINE L1 6255 6303 -2 2201 69 35 0 chr2 180727827 180728115 -72528468 - AluSp SINE Alu -15 298 1 26 50 0 0 chr2 180728118 180728158 -72528425 + AT_rich Low_complexity Low_complexity 1 40 0 2520 81 0 0 chr2 180728343 180728652 -72527931 - AluSg SINE Alu -1 309 1 456 321 45 113 chr2 180728667 180729047 -72527536 - L2 LINE L2 0 3272 2919 2439 45 0 29 chr2 180729265 180729573 -72527010 - AluY SINE Alu -12 299 1 2142 109 7 0 chr2 180731297 180731580 -72525003 + AluSx SINE Alu 1 285 -27 224 261 43 0 chr2 180731797 180731866 -72524717 - MIR SINE MIR -130 132 61 808 218 23 51 chr2 180733238 180733454 -72523129 + L1MA10 LINE L1 6039 6248 -86 620 229 74 39 chr2 180733454 180733780 -72522803 - LTR35 LTR ERV1 -2 669 350 240 278 28 28 chr2 180733903 180733975 -72522608 - LTR35 LTR ERV1 -544 74 3 438 200 0 32 chr2 180733975 180734070 -72522513 + L1MA10 LINE L1 6241 6332 -2 760 231 143 6 chr2 180734286 180734468 -72522115 + MER63A DNA MER1_type 4 210 0 303 299 97 30 chr2 180737122 180737256 -72519327 + MIR SINE MIR 45 187 -75 977 229 132 18 chr2 180737258 180737538 -72519045 + L1ME2 LINE L1 5844 6155 -9 351 214 0 0 chr2 180738476 180738546 -72518037 + MIR SINE MIR 64 133 -129 252 354 35 9 chr2 180739103 180739216 -72517367 - MIR SINE MIR -131 131 16 1901 162 0 10 chr2 180739524 180739827 -72516756 + AluJb SINE Alu 1 300 -12 2324 78 0 59 chr2 180739872 180740194 -72516389 + AluY SINE Alu 1 303 -8 521 316 65 14 chr2 180741111 180741326 -72515257 + MIR SINE MIR 31 256 -6 784 164 8 22 chr2 180742085 180742219 -72514364 + FLAM_A SINE Alu 1 132 -1 576 65 0 0 chr2 180742219 180742296 -72514287 + (TAGA)n Simple_repeat Simple_repeat 4 80 0 353 226 54 99 chr2 180742370 180742591 -72513992 - L1MC4 LINE L1 0 8042 7832 1782 158 0 40 chr2 180742611 180742909 -72513674 + AluJb SINE Alu 4 289 -23 227 269 69 23 chr2 180742927 180742942 -72513641 - L1MA10 LINE L1 -24 6310 6296 3209 197 61 19 chr2 180742942 180743664 -72512919 - L1ME2 LINE L1 -30 6134 5383 1394 284 41 17 chr2 180743676 180744144 -72512439 + Charlie8 DNA MER1_type 61 539 -1878 243 234 62 0 chr2 180744144 180744208 -72512375 + Charlie8 DNA MER1_type 2349 2416 -1 23 0 0 0 chr2 180744780 180744803 -72511780 + AT_rich Low_complexity Low_complexity 1 23 0 2026 127 0 3 chr2 180745822 180746113 -72510470 + AluSx SINE Alu 1 290 -22 209 277 0 15 chr2 180746553 180746618 -72509965 + L3 LINE CR1 1217 1280 -297 223 341 0 12 chr2 180747103 180747185 -72509398 - L2 LINE L2 -1 3312 3232 198 71 0 0 chr2 180747343 180747371 -72509212 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 304 258 66 103 chr2 180747374 180747474 -72509109 - MIR SINE MIR -10 252 150 2043 141 0 3 chr2 180747474 180747771 -72508812 + AluJb SINE Alu 3 298 -14 304 258 66 103 chr2 180747771 180747937 -72508646 - MIR SINE MIR -112 150 1 2231 115 7 0 chr2 180748055 180748359 -72508224 + AluSq SINE Alu 1 306 -7 231 224 0 52 chr2 180749729 180749787 -72506796 - MLT1L LTR MaLR -4 611 557 838 214 21 11 chr2 180749790 180749977 -72506606 + MER5A DNA MER1_type 1 189 0 605 270 138 52 chr2 180749991 180750454 -72506129 - MLT1L LTR MaLR -69 546 44 974 161 51 84 chr2 180750491 180750764 -72505819 + L1MB2 LINE L1 5904 6167 -4 628 280 60 0 chr2 180751435 180751603 -72504980 + MIR SINE MIR 74 251 -11 1117 126 45 0 chr2 180752828 180753026 -72503557 + MER96B DNA MER1_type? 148 354 -63 358 197 14 14 chr2 180753075 180753146 -72503437 + MER96B DNA MER1_type? 347 417 0 1621 143 28 63 chr2 180754000 180754286 -72502297 + AluJb SINE Alu 5 280 -32 225 0 0 0 chr2 180754286 180754311 -72502272 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 21 36 0 0 chr2 180755637 180755665 -72500918 + AT_rich Low_complexity Low_complexity 1 28 0 1707 175 14 0 chr2 180755877 180756162 -72500421 + AluJo SINE Alu 1 289 -23 421 303 31 105 chr2 180757720 180758014 -72498569 + L2 LINE L2 3001 3272 0 2177 112 3 0 chr2 180759373 180759685 -72496898 + AluSq SINE Alu 1 313 0 2374 201 41 44 chr2 180759758 180760300 -72496283 - MLT1F LTR MaLR -2 540 1 391 260 52 64 chr2 180760420 180760593 -72495990 - MIR3 SINE MIR -16 192 22 1229 167 43 119 chr2 180761439 180761523 -72495060 + MLT1A1 LTR MaLR 1 90 -275 1777 108 66 77 chr2 180761523 180761902 -72494681 - THE1C LTR MaLR 0 375 1 1229 167 43 119 chr2 180761902 180762212 -72494371 + MLT1A1 LTR MaLR 90 365 0 1640 170 32 14 chr2 180762310 180762593 -72493990 - AluJb SINE Alu -24 288 1 682 185 70 25 chr2 180762719 180762876 -72493707 - MIR SINE MIR -10 252 89 2033 145 0 3 chr2 180763658 180763955 -72492628 - AluJb SINE Alu -16 296 1 236 53 26 0 chr2 180763961 180763999 -72492584 + (TTA)n Simple_repeat Simple_repeat 2 40 0 1058 168 0 0 chr2 180764001 180764162 -72492421 - AluSg/x SINE Alu -18 294 134 1071 173 16 0 chr2 180764343 180764534 -72492049 + AluSg/x SINE Alu 115 308 -4 1996 148 0 0 chr2 180766790 180767093 -72489490 - AluSx SINE Alu -9 303 1 348 122 0 122 chr2 180767439 180767513 -72489070 - AluJb SINE Alu 0 302 238 5473 129 65 51 chr2 180767528 180768935 -72487648 - pTR5 LTR ERV1 -143 2295 744 285 60 220 0 chr2 180768939 180768989 -72487594 - AluJb SINE Alu -67 235 175 1353 185 18 0 chr2 180768989 180769211 -72487372 - AluJb SINE Alu -81 231 6 633 95 0 0 chr2 180769656 180769740 -72486843 + AluY SINE Alu 212 295 -16 284 262 87 8 chr2 180770058 180770184 -72486399 + L1ME4a LINE L1 5968 6103 -18 842 186 0 0 chr2 180770213 180770353 -72486230 + FLAM_C SINE Alu 1 140 -3 260 316 61 0 chr2 180770703 180770817 -72485766 + MIR SINE MIR 124 244 -18 970 150 0 0 chr2 180770920 180771060 -72485523 + FLAM_C SINE Alu 1 140 -3 1057 109 11 98 chr2 180771151 180771335 -72485248 + AluSp SINE Alu 133 300 -13 213 94 0 0 chr2 180771605 180771637 -72484946 + (T)n Simple_repeat Simple_repeat 1 32 0 214 233 67 0 chr2 180771720 180771780 -72484803 + MIR SINE MIR 104 167 -95 2855 13 0 0 chr2 180772800 180773107 -72483476 - AluYa5 SINE Alu -4 307 1 1794 169 7 0 chr2 180773126 180773410 -72483173 - AluJo SINE Alu -12 300 15 1246 170 121 18 chr2 180773959 180774089 -72482494 + MLT1A1 LTR MaLR 10 125 -240 2185 105 3 3 chr2 180774089 180774384 -72482199 + AluSx SINE Alu 18 312 0 1246 170 121 18 chr2 180774384 180774535 -72482048 + MLT1A1 LTR MaLR 125 320 -45 322 244 35 0 chr2 180774749 180774835 -72481748 + MIR SINE MIR 37 125 -137 516 242 128 68 chr2 180774922 180775081 -72481502 - HAL1 LINE L1 -1371 1136 988 2210 101 30 0 chr2 180775081 180775377 -72481206 - AluSc SINE Alu -4 305 1 786 148 0 37 chr2 180775378 180775513 -72481070 - AluJo/FLAM SINE Alu -171 131 2 2263 95 3 16 chr2 180775522 180775827 -72480756 - AluSq SINE Alu -12 301 1 516 242 128 68 chr2 180775827 180776006 -72480577 - HAL1 LINE L1 -1526 981 765 378 249 124 94 chr2 180776023 180776256 -72480327 + MER112 DNA MER1_type 1 240 -20 315 309 48 24 chr2 180776288 180776453 -72480130 - HAL1 LINE L1 -1809 698 530 357 280 96 0 chr2 180776461 180776586 -72479997 - HAL1 LINE L1 -2012 495 359 2276 96 3 0 chr2 180776597 180776900 -72479683 + AluY SINE Alu 1 304 -7 473 258 0 0 chr2 180776912 180777005 -72479578 + AluS SINE Alu 2 94 -219 3884 121 20 0 chr2 180777005 180777559 -72479024 - MER61E LTR ERV1 -4 565 1 12211 169 60 59 chr2 180777569 180779784 -72476799 - MER61E-int LTR ERV1 -2 6994 4783 2313 104 0 0 chr2 180779784 180780081 -72476502 - AluY SINE Alu -14 297 1 12211 169 60 59 chr2 180780081 180780111 -72476472 - MER61E-int LTR ERV1 -2213 4783 4755 2134 114 0 10 chr2 180780111 180780408 -72476175 + AluSc SINE Alu 1 294 -15 2554 71 3 0 chr2 180780408 180780717 -72475866 + AluY SINE Alu 1 310 -1 12211 169 60 59 chr2 180780717 180781643 -72474940 - MER61E-int LTR ERV1 -2241 4755 3832 2148 123 0 0 chr2 180781643 180781960 -72474623 + AluSx SINE Alu 1 317 0 12211 169 60 59 chr2 180781960 180782628 -72473955 - MER61E-int LTR ERV1 -3164 3832 609 3419 199 12 13 chr2 180782624 180783307 -72473276 - HUERS-P3 LTR ERV1 -4792 2299 2133 * 336 250 52 10 chr2 180783297 180783393 -72473190 - HUERS-P3 LTR ERV1 -5571 1520 1421 * 7266 201 50 22 chr2 180784350 180785964 -72470619 - HUERS-P3 LTR ERV1 -5336 1660 2 3977 106 23 4 chr2 180785990 180786548 -72470035 - MER61E LTR ERV1 0 569 1 876 193 81 15 chr2 180786548 180786745 -72469838 + AluJb SINE Alu 85 294 -18 380 268 152 30 chr2 180786750 180786933 -72469650 - HAL1 LINE L1 -2154 353 135 5324 83 121 0 chr2 180786933 180787670 -72468913 - LTR12 LTR ERV1 0 826 1 380 268 152 30 chr2 180787670 180787717 -72468866 - HAL1 LINE L1 -2372 135 95 677 213 0 7 chr2 180787729 180787865 -72468718 + AluJo SINE Alu 2 136 -176 2257 99 7 0 chr2 180787965 180788249 -72468334 - AluSc SINE Alu -23 286 1 2883 104 35 43 chr2 180788344 180788684 -72467899 - MER4E LTR ERV1 0 766 425 2518 86 0 0 chr2 180788684 180788987 -72467596 + AluSx SINE Alu 1 303 -9 2530 66 0 0 chr2 180788987 180789288 -72467295 + AluY SINE Alu 1 301 -10 2883 104 35 43 chr2 180789288 180789547 -72467036 - MER4E LTR ERV1 -339 427 1 896 141 13 34 chr2 180789588 180789737 -72466846 - FRAM SINE Alu -18 158 13 338 223 0 40 chr2 180789746 180789864 -72466719 - L1M4 LINE L1 -370 5751 5660 1954 113 0 52 chr2 180789864 180789968 -72466615 - MER4A LTR ERV1 0 664 556 2838 57 117 5 chr2 180789968 180790371 -72466212 - LTR7 LTR ERV1 -2 448 1 1954 113 0 52 chr2 180790371 180790575 -72466008 - MER4A LTR ERV1 -108 556 372 334 135 19 0 chr2 180790575 180790627 -72465956 - MER4A LTR ERV1 -351 313 261 613 133 0 20 chr2 180790627 180790725 -72465858 - MER4A LTR ERV1 -566 98 3 421 223 135 20 chr2 180790840 180790988 -72465595 - MER5A DNA MER1_type -7 182 18 1625 169 151 16 chr2 180791188 180791625 -72464958 + LTR54B LTR ERV1 1 496 -2 782 166 6 25 chr2 180792767 180792906 -72463677 + L1MA6 LINE L1 6141 6278 -22 1476 112 10 0 chr2 180792906 180793111 -72463472 - AluSg/x SINE Alu -20 292 86 782 166 6 25 chr2 180793111 180793134 -72463449 + L1MA6 LINE L1 6278 6300 0 352 175 16 0 chr2 180793297 180793360 -72463223 + LTR1B LTR ERV1 740 803 -23 * 1026 131 7 0 chr2 180793357 180793502 -72463081 + LTR8 LTR ERV1 546 691 0 440 256 31 16 chr2 180793502 180793626 -72462957 - MER34B LTR ERV1 -225 340 215 282 105 4 0 chr2 180793651 180793702 -72462881 - MER41-int LTR ERV1 -1559 4387 2675 3541 145 137 48 chr2 180793807 180794552 -72462031 + LTR1B LTR ERV1 1 811 -15 1991 179 70 32 chr2 180794571 180795013 -72461570 + LTR2B LTR ERV1 32 490 0 4450 101 12 81 chr2 180795030 180795196 -72461387 - LTR8 LTR ERV1 0 691 515 2084 123 7 26 chr2 180795196 180795504 -72461079 - AluSx SINE Alu -10 302 1 4450 101 12 81 chr2 180795504 180796079 -72460504 - LTR8 LTR ERV1 -176 515 1 327 234 0 0 chr2 180796103 180796167 -72460416 - MER34C LTR ERV1 -485 100 37 243 0 0 0 chr2 180796677 180796704 -72459879 + (T)n Simple_repeat Simple_repeat 1 27 0 255 259 0 0 chr2 180796860 180796914 -72459669 - L2 LINE L2 -69 3244 3191 777 154 0 8 chr2 180797078 180797201 -72459382 - FLAM_C SINE Alu -10 123 2 2151 171 13 23 chr2 180797205 180797592 -72458991 - MSTD LTR MaLR -13 383 1 195 286 0 0 chr2 180797706 180797755 -72458828 - L2 LINE L2 -342 2972 2924 2187 191 30 34 chr2 180798021 180798460 -72458123 - MER44D DNA MER2_type -3 602 111 686 193 0 0 chr2 180798848 180798962 -72457621 - MER44D DNA MER2_type -591 114 1 639 309 81 49 chr2 180798962 180799032 -72457551 - L2 LINE L2 -779 2535 2469 2380 80 17 0 chr2 180799032 180799332 -72457251 + AluY SINE Alu 1 305 -6 639 309 81 49 chr2 180799332 180799546 -72457037 - L2 LINE L2 -845 2469 2242 2397 67 0 23 chr2 180799561 180799860 -72456723 + AluSq SINE Alu 1 292 -21 334 242 0 30 chr2 180799972 180800071 -72456512 - L1ME2 LINE L1 -135 6029 5934 2056 103 72 0 chr2 180800085 180800375 -72456208 - AluSx SINE Alu 0 312 2 1086 191 53 61 chr2 180800382 180800743 -72455840 - L1ME LINE L1 -3191 2889 2532 1250 181 5 0 chr2 180800744 180800954 -72455629 - AluJo SINE Alu -9 303 93 2032 288 40 49 chr2 180800954 180801191 -72455392 - L1ME LINE L1 -3698 2388 2150 2225 116 0 3 chr2 180801191 180801483 -72455100 - AluSx SINE Alu -21 291 1 2032 288 40 49 chr2 180801483 180801984 -72454599 - L1ME LINE L1 -3936 2150 1646 1865 177 0 0 chr2 180801984 180802289 -72454294 + AluJo SINE Alu 5 309 -3 2032 288 40 49 chr2 180802289 180802664 -72453919 - L1ME LINE L1 -4440 1646 1319 2492 96 0 0 chr2 180802664 180802976 -72453607 + AluSx SINE Alu 1 312 0 2032 288 40 49 chr2 180802976 180803126 -72453457 - L1ME LINE L1 -4767 1319 1169 1781 225 46 0 chr2 180803128 180803457 -72453126 + Tigger7 DNA MER2_type 1 344 -389 417 167 12 0 chr2 180803452 180803532 -72453051 + Tigger7 DNA MER2_type 2439 2519 -68 1077 189 234 25 chr2 180803532 180803886 -72452697 - MSTC LTR MaLR 0 428 1 424 164 14 27 chr2 180803886 180803959 -72452624 + Tigger7 DNA MER2_type 2415 2486 -1 1347 237 40 13 chr2 180803959 180804157 -72452426 - L1ME LINE L1 -4982 1088 897 4920 121 48 38 chr2 180804157 180804764 -72451819 - MER4E LTR ERV1 0 779 161 2178 103 3 7 chr2 180804764 180805054 -72451529 - AluSx SINE Alu -23 289 1 4920 121 48 38 chr2 180805054 180805217 -72451366 - MER4E LTR ERV1 -618 161 1 1347 237 40 13 chr2 180805217 180805674 -72450909 - L1ME LINE L1 -5173 897 521 774 298 79 43 chr2 180805802 180806195 -72450388 - L1ME LINE L1 -5618 452 46 348 83 0 0 chr2 180806420 180806468 -72450115 + (TC)n Simple_repeat Simple_repeat 1 48 0 2222 92 0 0 chr2 180806499 180806804 -72449779 + AluY SINE Alu 1 305 0 283 237 17 0 chr2 180807419 180807478 -72449105 - MER113 DNA MER1_type? -130 391 332 320 207 60 35 chr2 180807643 180807759 -72448824 - MER113 DNA MER1_type? -402 119 1 641 275 40 61 chr2 180808720 180808960 -72447623 - L1MDa LINE L1 -4728 1352 1109 2507 70 0 6 chr2 180808960 180809273 -72447310 - AluY SINE Alu 0 311 1 641 275 40 61 chr2 180809273 180809559 -72447024 - L1MDa LINE L1 -4971 1109 837 376 143 32 167 chr2 180809589 180809715 -72446868 - AluJ/FLAM SINE Alu -236 66 1 849 262 100 35 chr2 180809715 180810196 -72446387 - L1MDa LINE L1 -5254 816 305 486 231 15 23 chr2 180810738 180810868 -72445715 - L1MDa LINE L1 -5676 394 266 1205 128 0 0 chr2 180810871 180811043 -72445540 - AluSq SINE Alu -7 306 135 2319 77 13 3 chr2 180811043 180811342 -72445241 - AluSq SINE Alu -11 302 1 614 246 170 6 chr2 180811342 180811513 -72445070 - L1MDa LINE L1 -5797 273 75 3361 145 38 29 chr2 180811693 180811998 -72444585 - L1MD1 LINE L1 -1 6635 6321 1748 186 10 0 chr2 180811998 180812299 -72444284 + AluJo SINE Alu 1 304 -8 3361 145 38 29 chr2 180812299 180812578 -72444005 - L1MD1 LINE L1 -315 6321 6046 1780 171 9 6 chr2 180812737 180813053 -72443530 - L1MD1 LINE L1 -616 6020 5704 778 171 0 0 chr2 180813053 180813176 -72443407 - AluJb SINE Alu -5 307 185 1245 174 97 12 chr2 180813392 180813650 -72442933 + LTR4 LTR ERV1 317 596 0 1234 162 0 0 chr2 180813651 180813836 -72442747 - AluJb SINE Alu -125 187 3 2268 234 12 27 chr2 180813837 180814436 -72442147 - L1MD1 LINE L1 -833 5707 5118 1300 156 9 9 chr2 180814452 180814677 -72441906 - AluSg/x SINE Alu -4 308 84 2204 13 0 0 chr2 180814777 180815015 -72441568 - AluY SINE Alu -53 258 21 1458 231 34 21 chr2 180815866 180816247 -72440336 - L1MB5 LINE L1 -106 6068 5683 2229 281 32 54 chr2 180816372 180817203 -72439380 - L1M3de LINE L1 -5671 982 8 28 29 0 0 chr2 180817419 180817454 -72439129 + AT_rich Low_complexity Low_complexity 1 35 0 1163 15 0 0 chr2 180817839 180817974 -72438609 - AluYb8 SINE Alu -46 272 138 4246 284 67 34 chr2 180817977 180819359 -72437224 + MLT1A2-int LTR MaLR 302 1729 -6 293 310 0 11 chr2 180819405 180819492 -72437091 + AluJo SINE Alu 87 172 -130 1140 183 24 12 chr2 180819613 180819865 -72436718 - AluSx SINE Alu -53 259 5 584 264 65 13 chr2 180819893 180820124 -72436459 - L1MD1 LINE L1 -1529 5011 4769 834 173 81 23 chr2 180820125 180820298 -72436285 - AluJo SINE Alu -9 303 121 1591 205 22 40 chr2 180820299 180820699 -72435884 - L1MD1 LINE L1 -1779 4761 4369 6167 209 65 80 chr2 180820702 180821948 -72434635 - L1MD1 LINE L1 -2436 4104 2841 1804 179 0 0 chr2 180821948 180822238 -72434345 + AluJb SINE Alu 2 291 -21 6167 209 65 80 chr2 180822238 180822544 -72434039 - L1MD1 LINE L1 -3699 2841 2532 1937 134 7 14 chr2 180822544 180822835 -72433748 + AluJo SINE Alu 1 289 -23 6167 209 65 80 chr2 180822835 180823541 -72433042 - L1MD1 LINE L1 -4008 2532 1817 2257 128 47 36 chr2 180823541 180823901 -72432682 - THE1B LTR MaLR 0 364 1 6167 209 65 80 chr2 180823901 180824085 -72432498 - L1MD1 LINE L1 -4723 1817 1632 804 206 0 0 chr2 180824085 180824216 -72432367 - AluJo SINE Alu -171 131 1 6167 209 65 80 chr2 180824216 180824281 -72432302 - L1MD1 LINE L1 -4908 1632 1568 2837 16 0 3 chr2 180824281 180824594 -72431989 - AluYb8 SINE Alu -6 312 1 6167 209 65 80 chr2 180824594 180824631 -72431952 - L1MD1 LINE L1 -4972 1568 1532 1691 172 35 0 chr2 180824631 180824916 -72431667 - AluJo SINE Alu -17 295 1 6167 209 65 80 chr2 180824916 180825247 -72431336 - L1MD1 LINE L1 -5008 1532 1198 1600 205 13 3 chr2 180825247 180825550 -72431033 - AluJo SINE Alu -6 306 1 901 143 0 0 chr2 180825555 180825681 -72430902 - FLAM_A SINE Alu -7 126 1 6167 209 65 80 chr2 180825681 180825789 -72430794 - L1MD1 LINE L1 -5346 1194 1086 1353 203 97 58 chr2 180825789 180826149 -72430434 + MLT1A2 LTR MaLR 1 374 0 6167 209 65 80 chr2 180826149 180827137 -72429446 - L1MD1 LINE L1 -5454 1086 15 306 216 68 14 chr2 180827354 180827428 -72429155 - MLT1K LTR MaLR 0 588 511 * 307 206 0 29 chr2 180827368 180827436 -72429147 - LTR67 LTR ERVL -16 541 476 440 234 100 131 chr2 180827887 180828177 -72428406 + LTR37B LTR ERV1 7 287 -181 1402 225 70 43 chr2 180829290 180829735 -72426848 + MLT1C LTR MaLR 5 461 -6 2170 48 41 31 chr2 180829974 180830267 -72426316 - AluY SINE Alu -15 296 1 379 238 197 47 chr2 180830657 180830850 -72425733 + MIR SINE MIR 41 262 0 2119 146 0 13 chr2 180830976 180831292 -72425291 + AluSx SINE Alu 1 312 0 40 37 0 0 chr2 180831502 180831556 -72425027 + AT_rich Low_complexity Low_complexity 1 54 0 2338 89 0 0 chr2 180831569 180831861 -72424722 + AluSx SINE Alu 5 296 -16 2219 115 0 3 chr2 180831920 180832232 -72424351 + AluY SINE Alu 1 311 0 583 316 72 0 chr2 180832750 180832943 -72423640 + L2 LINE L2 2581 2787 -527 1937 107 0 4 chr2 180833317 180833570 -72423013 + AluSq SINE Alu 1 252 -61 861 79 0 9 chr2 180833570 180833684 -72422899 + AluSg/x SINE Alu 167 279 -33 324 0 0 0 chr2 180833687 180833723 -72422860 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 2246 115 0 0 chr2 180834008 180834304 -72422279 + AluY SINE Alu 1 296 -15 1045 149 0 12 chr2 180834555 180834712 -72421871 + AluSg/x SINE Alu 144 300 -10 2522 80 0 3 chr2 180834712 180835025 -72421558 + AluSq SINE Alu 1 312 -1 2128 127 3 13 chr2 180835109 180835424 -72421159 + AluSx SINE Alu 1 312 0 22 0 0 0 chr2 180835483 180835505 -72421078 + AT_rich Low_complexity Low_complexity 1 22 0 972 145 50 30 chr2 180835531 180835547 -72421036 - L1MB4 LINE L1 -29 6151 6137 2229 110 10 0 chr2 180835547 180835837 -72420746 + AluSg SINE Alu 1 293 -17 972 145 50 30 chr2 180835837 180836020 -72420563 - L1MB4 LINE L1 -43 6137 5948 1631 130 8 8 chr2 180836020 180836258 -72420325 - AluSx SINE Alu -4 306 69 226 177 129 32 chr2 180836258 180836320 -72420263 + LTR10B LTR ERV1 1 68 -437 1101 240 20 9 chr2 180836394 180836730 -72419853 + LTR10B LTR ERV1 157 526 -21 467 156 0 52 chr2 180836732 180836809 -72419774 - AluSx SINE Alu -238 74 2 761 145 0 0 chr2 180836809 180836926 -72419657 - L1MB4 LINE L1 -221 5959 5843 202 0 91 0 chr2 180836938 180836971 -72419612 + T-rich Low_complexity Low_complexity 1 36 0 1988 118 0 24 chr2 180836971 180837258 -72419325 - AluSx SINE Alu -32 280 1 1808 160 10 16 chr2 180838665 180838977 -72417606 + AluJb SINE Alu 1 310 -2 1014 75 7 41 chr2 180839000 180839146 -72417437 + L1PA10 LINE L1 6023 6163 -5 21 57 0 0 chr2 180839146 180839181 -72417402 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr2 180839517 180839541 -72417042 + AT_rich Low_complexity Low_complexity 1 24 0 186 43 0 0 chr2 180839551 180839574 -72417009 + (A)n Simple_repeat Simple_repeat 1 23 0 2444 153 31 0 chr2 180839684 180840075 -72416508 - MER57A LTR ERV1 0 403 1 1009 188 0 29 chr2 180840087 180840257 -72416326 + FRAM SINE Alu 1 165 -1 367 291 90 17 chr2 180840387 180840621 -72415962 - L1ME3 LINE L1 -214 5948 5698 680 258 124 40 chr2 180840626 180841246 -72415337 + L2 LINE L2 2492 3206 -107 9433 133 57 18 chr2 180841248 180841370 -72415213 - Tigger1 DNA MER2_type -825 1593 1477 2145 97 0 76 chr2 180841370 180841699 -72414884 - AluY SINE Alu -7 304 1 9433 133 57 18 chr2 180841699 180843108 -72413475 - Tigger1 DNA MER2_type -941 1477 2 429 223 113 15 chr2 180843114 180843243 -72413340 - L1ME3 LINE L1 -611 5553 5431 4241 83 26 2 chr2 180843243 180843784 -72412799 + MER41A LTR ERV1 1 554 0 429 223 113 15 chr2 180843784 180843816 -72412767 - L1ME3 LINE L1 -733 5431 5404 214 125 0 0 chr2 180844015 180844047 -72412536 - L2 LINE L2 -1 3271 3240 506 239 161 44 chr2 180846376 180846581 -72410002 + MIR SINE MIR 34 262 0 240 181 310 35 chr2 180846845 180846961 -72409622 + MIR3 SINE MIR 45 192 -16 1679 131 25 0 chr2 180846968 180847212 -72409371 - AluJb SINE Alu -52 260 11 2656 40 0 0 chr2 180848335 180848636 -72407947 + AluY SINE Alu 1 301 -10 1818 167 0 13 chr2 180848664 180848969 -72407614 + AluJo SINE Alu 3 303 -9 228 280 0 0 chr2 180850237 180850287 -72406296 + L2 LINE L2 3210 3259 -13 1711 142 15 7 chr2 180850909 180851183 -72405400 - AluJo SINE Alu -26 286 11 3070 166 69 30 chr2 180851287 180851857 -72404726 - L1MB8 LINE L1 -96 6082 5535 2135 142 3 3 chr2 180851857 180852168 -72404415 - AluSx SINE Alu -1 311 1 3070 166 69 30 chr2 180852168 180852212 -72404371 - L1MB8 LINE L1 -643 5535 5494 2249 109 0 28 chr2 180852212 180852533 -72404050 - AluSx SINE Alu 0 312 1 3070 166 69 30 chr2 180852533 180852572 -72404011 - L1MB8 LINE L1 -684 5494 5403 1454 133 12 21 chr2 180852657 180852898 -72403685 + L1MB3 LINE L1 5927 6165 -18 2046 126 3 13 chr2 180852985 180853294 -72403289 - AluJb SINE Alu -6 306 1 221 299 127 50 chr2 180854454 180854675 -72401908 + L2 LINE L2 3034 3271 -1 264 271 35 35 chr2 180856250 180856335 -72400248 - L2 LINE L2 -4 3268 3184 935 171 0 0 chr2 180856393 180856539 -72400044 - AluJo SINE Alu -164 148 3 2301 77 0 30 chr2 180856962 180857262 -72399321 - AluSc SINE Alu -18 291 1 423 258 71 40 chr2 180857767 180857965 -72398618 + L1ME3 LINE L1 5957 6160 -2 807 111 71 16 chr2 180859722 180859848 -72396735 - FLAM_C SINE Alu -10 133 1 378 257 19 19 chr2 180859864 180859969 -72396614 + MER58 DNA MER1_type 1 105 -110 409 179 0 0 chr2 180859973 180860040 -72396543 + MER58 DNA MER1_type 2347 2413 -7 406 257 0 18 chr2 180861871 180861980 -72394603 - L1MC5 LINE L1 -1124 6837 6731 245 226 44 10 chr2 180862016 180862227 -72394356 + (TA)n Simple_repeat Simple_repeat 1 218 0 * 375 184 24 54 chr2 180862115 180862283 -72394300 + (TATAA)n Simple_repeat Simple_repeat 1 163 0 1059 88 7 7 chr2 180862299 180862436 -72394147 + AluJo SINE Alu 1 137 -175 311 173 37 62 chr2 180862457 180862538 -72394045 - L1MC5 LINE L1 -1877 5931 5853 2157 117 7 0 chr2 180862567 180862865 -72393718 + AluSx SINE Alu 1 300 -12 2147 102 6 43 chr2 180863019 180863341 -72393242 + AluSx SINE Alu 1 310 -2 2219 83 7 10 chr2 180863580 180863870 -72392713 - AluSx SINE Alu -23 289 1 198 0 0 0 chr2 180863872 180863894 -72392689 + (T)n Simple_repeat Simple_repeat 1 22 0 1285 169 61 40 chr2 180864376 180864654 -72391929 - L1MB5 LINE L1 -6 6168 5885 798 223 0 36 chr2 180864654 180864820 -72391763 - FRAM SINE Alu -16 160 1 2100 127 3 0 chr2 180864853 180865145 -72391438 + AluSq SINE Alu 1 293 -20 4425 159 41 38 chr2 180865155 180865682 -72390901 - L1MB5 LINE L1 -316 5858 5334 989 187 6 12 chr2 180865682 180865848 -72390735 - FRAM SINE Alu 0 166 2 4425 159 41 38 chr2 180865848 180865988 -72390595 - L1MB5 LINE L1 -840 5334 5196 2987 173 32 37 chr2 180865988 180866606 -72389977 - L1MB7 LINE L1 -9 6175 5561 4425 159 41 38 chr2 180866606 180867040 -72389543 - L1MB5 LINE L1 -978 5196 4744 2265 92 3 0 chr2 180867040 180867333 -72389250 - AluSc SINE Alu -15 294 1 4425 159 41 38 chr2 180867333 180867728 -72388855 - L1MB5 LINE L1 -1430 4744 4352 686 205 0 16 chr2 180867742 180867869 -72388714 - FLAM_C SINE Alu -17 126 2 2067 122 0 16 chr2 180867875 180868178 -72388405 - AluSx SINE Alu -14 298 1 408 164 0 0 chr2 180868180 180868253 -72388330 - L1MB5 LINE L1 -1767 4379 4307 2426 70 0 23 chr2 180868449 180868751 -72387832 - AluY SINE Alu -16 295 1 38 0 0 0 chr2 180868847 180868885 -72387698 + AT_rich Low_complexity Low_complexity 1 38 0 1708 141 19 4 chr2 180868921 180869177 -72387406 + AluJo SINE Alu 34 293 -19 236 233 17 0 chr2 180869217 180869277 -72387306 - L1ME4a LINE L1 -78 6043 5983 2079 133 3 0 chr2 180869313 180869607 -72386976 + AluSx SINE Alu 1 295 -17 298 250 31 102 chr2 180869770 180869808 -72386775 - HAL1 LINE L1 0 2507 2468 2903 131 14 19 chr2 180869808 180870235 -72386348 - MSTC LTR MaLR 0 428 4 298 250 31 102 chr2 180870235 180870452 -72386131 - HAL1 LINE L1 -39 2468 2270 1860 153 7 3 chr2 180870659 180870954 -72385629 - AluSx SINE Alu -14 298 3 310 367 126 5 chr2 180871318 180871525 -72385058 - HAL1 LINE L1 -737 1770 1539 306 0 0 0 chr2 180871553 180871587 -72384996 + (T)n Simple_repeat Simple_repeat 1 34 0 2000 127 10 17 chr2 180871635 180871935 -72384648 - AluSx SINE Alu -12 300 3 4386 199 37 25 chr2 180871967 180873026 -72383557 + L1MD2 LINE L1 5136 6211 -148 21 0 0 0 chr2 180873027 180873048 -72383535 + AT_rich Low_complexity Low_complexity 1 21 0 547 226 98 83 chr2 180873082 180873267 -72383316 - L1ME4a LINE L1 -1 6120 5928 1780 146 20 36 chr2 180873267 180873569 -72383014 + AluJo SINE Alu 1 297 -15 547 226 98 83 chr2 180873569 180873649 -72382934 - L1ME4a LINE L1 -193 5928 5851 401 236 155 0 chr2 180873978 180874126 -72382457 - MIR SINE MIR 0 262 92 2214 119 0 3 chr2 180874131 180874433 -72382150 + AluSx SINE Alu 1 301 -11 1510 252 133 20 chr2 180874441 180875015 -72381568 + MLT1G LTR MaLR 1 583 -7 1940 176 69 0 chr2 180875113 180875477 -72381106 - MLT1B LTR MaLR -1 389 1 724 266 6 11 chr2 180875575 180875752 -72380831 + MER5B DNA MER1_type 1 176 -2 2215 103 3 0 chr2 180875936 180876253 -72380330 + AluSx SINE Alu 1 318 0 180 0 0 0 chr2 180877518 180877538 -72379045 + (T)n Simple_repeat Simple_repeat 1 20 0 243 299 188 56 chr2 180878664 180879058 -72377525 - L2 LINE L2 0 3272 2827 367 228 41 151 chr2 180881555 180881739 -72374844 - L1ME3 LINE L1 -6 6156 6000 1830 164 7 7 chr2 180881739 180882078 -72374505 + AluJb SINE Alu 1 312 0 367 228 41 151 chr2 180882078 180882112 -72374471 - L1ME3 LINE L1 -162 6000 5964 2460 91 103 3 chr2 180882125 180882465 -72374118 - MER51B LTR ERV1 0 377 4 303 49 0 0 chr2 180882465 180882506 -72374077 + (TA)n Simple_repeat Simple_repeat 1 41 0 208 254 25 25 chr2 180882638 180882756 -72373827 + (TATAA)n Simple_repeat Simple_repeat 1 118 0 289 254 107 16 chr2 180882761 180882883 -72373700 - L1ME3 LINE L1 -274 5847 5715 234 311 0 0 chr2 180883061 180883122 -72373461 + (CATG)n Simple_repeat Simple_repeat 2 62 0 21 0 0 0 chr2 180883588 180883609 -72372974 + AT_rich Low_complexity Low_complexity 1 21 0 261 252 84 8 chr2 180884277 180884408 -72372175 - L1MC/D LINE L1 -1958 5850 5710 3187 108 21 0 chr2 180886088 180886513 -72370070 - MER57B LTR ERV1 0 434 1 2190 115 23 0 chr2 180886993 180887298 -72369285 - AluSq SINE Alu -1 312 1 249 281 16 0 chr2 180888346 180888410 -72368173 - MIR3 SINE MIR -28 180 116 2326 98 0 0 chr2 180889032 180889368 -72367215 + AluSx SINE Alu 1 312 0 21 0 0 0 chr2 180889639 180889660 -72366923 + AT_rich Low_complexity Low_complexity 1 21 0 199 130 22 22 chr2 180891306 180891352 -72365231 + CT-rich Low_complexity Low_complexity 2 47 0 447 194 0 0 chr2 180892634 180892727 -72363856 + CT-rich Low_complexity Low_complexity 2 94 0 293 237 0 0 chr2 180893941 180894000 -72362583 - MER103 DNA DNA -102 64 6 340 208 62 21 chr2 180894141 180894172 -72362411 + MIR SINE MIR 45 73 -135 2307 96 0 0 chr2 180894172 180894465 -72362118 - AluSq SINE Alu -20 293 1 340 208 62 21 chr2 180894465 180894529 -72362054 + MIR SINE MIR 73 144 -64 304 152 0 0 chr2 180895326 180895372 -72361211 - L2 LINE L2 -5 3308 3263 224 188 188 0 chr2 180896728 180896797 -72359786 - MIR SINE MIR -16 246 165 1466 149 21 76 chr2 180898145 180898474 -72358109 + L1MB8 LINE L1 5868 6178 0 22 0 0 0 chr2 180898667 180898689 -72357894 + AT_rich Low_complexity Low_complexity 1 22 0 794 125 29 52 chr2 180898689 180898825 -72357758 - FLAM_C SINE Alu 0 133 1 419 300 144 22 chr2 180901072 180901252 -72355331 - MIR SINE MIR -41 221 20 548 244 65 24 chr2 180901261 180901429 -72355154 - MER5B DNA MER1_type 0 178 4 258 156 0 0 chr2 180901838 180901883 -72354700 + T-rich Low_complexity Low_complexity 1 45 0 1245 136 40 10 chr2 180901897 180902095 -72354488 - AluJo SINE Alu -108 204 1 2069 129 7 7 chr2 180902593 180902902 -72353681 - AluSc SINE Alu 0 309 1 652 228 158 9 chr2 180903263 180903491 -72353092 + MIR SINE MIR 1 262 0 200 226 0 19 chr2 180903924 180903977 -72352606 + T-rich Low_complexity Low_complexity 2 53 0 22 35 0 0 chr2 180904481 180904510 -72352073 + AT_rich Low_complexity Low_complexity 1 29 0 254 15 48 0 chr2 180904744 180904793 -72351790 - AluY SINE Alu 0 299 258 351 0 0 0 chr2 180905159 180905198 -72351385 + (T)n Simple_repeat Simple_repeat 1 39 0 440 269 34 45 chr2 180905468 180905728 -72350855 + L1ME LINE L1 373 636 -5434 19253 32 1 1 chr2 180906004 180908457 -72348126 - L1P LINE L1 -1345 4801 2349 656 216 8 0 chr2 180908457 180908581 -72348002 + MER2 DNA MER2_type 7 131 -214 358 257 0 0 chr2 180908581 180908655 -72347928 + Tigger3(Golem) DNA MER2_type 1 74 -2955 583 204 24 36 chr2 180910148 180910315 -72346268 - THE1C LTR MaLR 0 375 211 608 196 6 0 chr2 180910547 180910726 -72345857 + (CAT)n Simple_repeat Simple_repeat 1 180 0 734 201 3 0 chr2 180910759 180911083 -72345500 + (CAT)n Simple_repeat Simple_repeat 1 325 0 203 189 0 0 chr2 180911553 180911590 -72344993 + A-rich Low_complexity Low_complexity 1 37 0 22 56 0 0 chr2 180911664 180911700 -72344883 + AT_rich Low_complexity Low_complexity 1 36 0 21 95 0 0 chr2 180911733 180911796 -72344787 + AT_rich Low_complexity Low_complexity 1 63 0 41024 31 21 2 chr2 180911996 180918031 -72338552 - L1PA2 LINE L1 0 6155 1 204 97 0 0 chr2 180918314 180918345 -72338238 + (T)n Simple_repeat Simple_repeat 1 31 0 499 253 43 56 chr2 180919336 180919498 -72337085 + MIR SINE MIR 63 222 -40 513 219 155 32 chr2 180920551 180920738 -72335845 + MIR SINE MIR 43 252 -10 457 231 34 17 chr2 180920800 180920917 -72335666 + L2 LINE L2 2576 2694 -620 391 366 132 0 chr2 180920938 180921151 -72335432 - MIR SINE MIR -15 247 7 2514 45 0 0 chr2 180922013 180922304 -72334279 - AluY SINE Alu -19 292 2 1157 146 0 0 chr2 180922879 180923043 -72333540 - AluJb SINE Alu -14 298 135 655 224 24 49 chr2 180923057 180923262 -72333321 + L1MC5 LINE L1 7029 7228 -733 539 273 96 34 chr2 180923461 180923969 -72332614 + L1MC4 LINE L1 7302 7951 -91 211 304 157 17 chr2 180925338 180925453 -72331130 + L2 LINE L2 3142 3272 0 231 204 19 19 chr2 180925690 180925744 -72330839 - MLT1K LTR MaLR -352 236 183 353 274 10 20 chr2 180926048 180926150 -72330433 + L2 LINE L2 3210 3310 -3 290 314 71 49 chr2 180926621 180926847 -72329736 + L2 LINE L2 3034 3264 -8 2267 128 8 5 chr2 180928591 180928982 -72327601 - L1M2 LINE L1 -526 5774 5383 431 181 103 0 chr2 180928981 180929088 -72327495 + L1MA6 LINE L1 6182 6290 -1 * 220 156 0 44 chr2 180930378 180930423 -72326160 + CT-rich Low_complexity Low_complexity 4 46 0 209 285 73 88 chr2 180931571 180931708 -72324875 + L2 LINE L2 3138 3272 0 1140 294 103 41 chr2 180931731 180932361 -72324222 + HAL1 LINE L1 33 701 -1806 506 255 0 0 chr2 180933142 180933240 -72323343 + MER119 DNA MER1_type 3 100 -483 507 234 8 0 chr2 180933268 180933392 -72323191 + MER119 DNA MER1_type 455 579 -4 523 269 28 0 chr2 180933392 180933537 -72323046 + HAL1 LINE L1 743 891 -1616 204 40 0 0 chr2 180933543 180933568 -72323015 + (CA)n Simple_repeat Simple_repeat 2 26 0 760 262 61 11 chr2 180934941 180935220 -72321363 + L1ME2 LINE L1 2354 2646 -3500 1790 241 64 32 chr2 180935226 180935791 -72320792 + L1ME2 LINE L1 5572 6154 -10 280 204 102 9 chr2 180935937 180936045 -72320538 + L1MC4 LINE L1 7924 8041 -1 1761 262 87 17 chr2 180936278 180937219 -72319364 + L1ME3A LINE L1 2126 3078 -3137 491 276 31 0 chr2 180937221 180937384 -72319199 + L1ME3A LINE L1 4819 4986 -1229 1160 162 11 35 chr2 180937391 180937657 -72318926 + AluJb SINE Alu 2 299 -13 2372 216 80 53 chr2 180937667 180938632 -72317951 + L1ME3A LINE L1 4992 6004 -235 6013 112 4 13 chr2 180938632 180940467 -72316116 + L1PA15 LINE L1 4332 6162 -3 2372 216 80 53 chr2 180940467 180940637 -72315946 + L1ME3A LINE L1 6004 6168 -71 352 324 61 33 chr2 180940687 180940900 -72315683 + L1ME1 LINE L1 4616 4834 -1312 22 0 0 0 chr2 180940911 180940933 -72315650 + AT_rich Low_complexity Low_complexity 1 22 0 373 275 191 26 chr2 180941052 180941121 -72315462 + L1ME1 LINE L1 5536 5592 -574 2042 148 19 16 chr2 180941121 180941485 -72315098 + MLT1A1 LTR MaLR 1 365 0 373 275 191 26 chr2 180941485 180941760 -72314823 + L1ME1 LINE L1 5592 5937 -229 2009 132 0 0 chr2 180941808 180942089 -72314494 + AluSx SINE Alu 1 281 -31 7677 26 0 0 chr2 180942110 180943422 -72313161 - L1PA4 LINE L1 -3 6152 4841 30 0 0 0 chr2 180943648 180943678 -72312905 + AT_rich Low_complexity Low_complexity 1 30 0 592 247 141 33 chr2 180943963 180944209 -72312374 + L1ME4a LINE L1 5571 5789 -332 2001 140 3 35 chr2 180944209 180944345 -72312238 + AluJo SINE Alu 1 140 -172 2415 71 10 0 chr2 180944345 180944653 -72311930 + AluY SINE Alu 1 311 0 2001 140 3 35 chr2 180944653 180944831 -72311752 + AluJo SINE Alu 140 305 -7 592 247 141 33 chr2 180944831 180944933 -72311650 + L1ME4a LINE L1 5789 5879 -242 1846 148 17 7 chr2 180944933 180945224 -72311359 - AluSx SINE Alu -18 294 1 592 247 141 33 chr2 180945224 180945363 -72311220 + L1ME4a LINE L1 5879 6112 -9 193 277 34 84 chr2 180945715 180945834 -72310749 + MIR3 SINE MIR 12 124 -84 338 339 17 9 chr2 180946061 180946176 -72310407 - MIR SINE MIR -136 126 11 207 269 0 0 chr2 180946363 180946415 -72310168 + A-rich Low_complexity Low_complexity 4 55 0 1421 157 14 7 chr2 180946822 180947108 -72309475 - L1 LINE L1 -743 5403 5116 318 341 94 41 chr2 180947331 180947747 -72308836 - L1MC4a LINE L1 -1880 5928 5491 493 311 73 46 chr2 180947867 180948169 -72308414 - L1MC4a LINE L1 -1089 5057 4748 216 0 0 0 chr2 180948843 180948867 -72307716 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2455 64 3 10 chr2 180949418 180949731 -72306852 + AluY SINE Alu 1 311 0 204 254 0 0 chr2 180950295 180950354 -72306229 + A-rich Low_complexity Low_complexity 2 60 0 992 128 6 0 chr2 180950355 180950534 -72306049 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 859 137 11 0 chr2 180950545 180950720 -72305863 + GA-rich Low_complexity Low_complexity 4 180 0 944 126 6 6 chr2 180950733 180951049 -72305534 + (GGAA)n Simple_repeat Simple_repeat 3 317 0 377 338 14 14 chr2 180952372 180952511 -72304072 - MIR3 SINE MIR -36 172 34 195 335 82 62 chr2 180952507 180952701 -72303882 + L2 LINE L2 3035 3232 -40 * 195 191 64 0 chr2 180954241 180954288 -72302295 - L2 LINE L2 0 3313 3264 231 277 36 48 chr2 180955085 180955168 -72301415 + L2 LINE L2 3222 3303 -10 872 179 18 103 chr2 180957249 180957472 -72299111 + MLT1A2 LTR MaLR 1 204 -170 25 0 0 0 chr2 180957503 180957528 -72299055 + AT_rich Low_complexity Low_complexity 1 25 0 551 241 86 12 chr2 180957745 180957907 -72298676 + MLT1A2 LTR MaLR 217 390 0 213 283 17 0 chr2 180957907 180957967 -72298616 + MIR3 SINE MIR 144 204 -4 2134 134 0 6 chr2 180958401 180958715 -72297868 + AluSx SINE Alu 1 312 0 319 211 22 44 chr2 180958920 180959010 -72297573 + L1MB5 LINE L1 5946 6033 -141 845 108 0 89 chr2 180959026 180959183 -72297400 + L1MB8 LINE L1 6028 6170 -8 2133 101 16 38 chr2 180960472 180960789 -72295794 + AluSg SINE Alu 1 310 0 584 249 52 6 chr2 180962490 180962663 -72293920 - MIR SINE MIR 0 262 82 204 163 0 0 chr2 180963518 180963561 -72293022 + (TG)n Simple_repeat Simple_repeat 1 43 0 415 257 5 48 chr2 180963575 180963762 -72292821 + (TG)n Simple_repeat Simple_repeat 2 180 0 824 235 91 5 chr2 180963945 180964166 -72292417 - MIR SINE MIR -16 246 7 339 331 52 7 chr2 180964277 180964413 -72292170 - MER5A DNA MER1_type 0 189 48 193 250 0 21 chr2 180964688 180964736 -72291847 + L2 LINE L2 3259 3305 -8 1195 162 28 19 chr2 180964858 180965074 -72291509 - MER20 DNA MER1_type 0 219 2 1690 265 107 64 chr2 180965289 180965547 -72291036 + HAL1 LINE L1 1406 1652 -855 2002 114 32 0 chr2 180965547 180965828 -72290755 + AluSg SINE Alu 1 290 -20 1690 265 107 64 chr2 180965828 180966280 -72290303 + HAL1 LINE L1 1652 2083 -424 2000 135 7 0 chr2 180966280 180966569 -72290014 - AluSx SINE Alu -19 293 3 1690 265 107 64 chr2 180966569 180966611 -72289972 + HAL1 LINE L1 2083 2122 -385 1290 185 113 58 chr2 180966611 180966957 -72289626 + MLT1A1 LTR MaLR 1 365 0 1690 265 107 64 chr2 180966957 180967258 -72289325 + HAL1 LINE L1 2122 2506 -1 750 236 179 44 chr2 180967500 180967907 -72288676 + L2 LINE L2 2852 3313 0 2194 124 0 0 chr2 180968215 180968513 -72288070 - AluSx SINE Alu -14 298 1 1239 234 43 20 chr2 180968650 180969043 -72287540 - MER74B LTR ERVL -10 612 211 294 208 0 0 chr2 180969075 180969128 -72287455 - MER74B LTR ERVL -569 53 1 838 232 12 0 chr2 180969242 180969406 -72287177 + FAM SINE Alu 1 166 -9 23 33 0 0 chr2 180969492 180969522 -72287061 + AT_rich Low_complexity Low_complexity 1 30 0 752 216 0 0 chr2 180969639 180969764 -72286819 + FLAM_A SINE Alu 1 125 -8 415 231 151 84 chr2 180970788 180971013 -72285570 + MIR SINE MIR 11 250 -12 1412 201 3 62 chr2 180972374 180972697 -72283886 + AluJo SINE Alu 1 304 -8 193 210 40 110 chr2 180972827 180972927 -72283656 - MIR3 SINE MIR -8 200 108 2889 206 92 31 chr2 180973201 180974274 -72282309 + L1ME1 LINE L1 5025 6158 -8 220 292 15 0 chr2 180974407 180974472 -72282111 + CT-rich Low_complexity Low_complexity 2 67 0 569 307 14 24 chr2 180975490 180975702 -72280881 - MIR SINE MIR -40 222 13 455 324 43 5 chr2 180975982 180976167 -72280416 + MIR3 SINE MIR 11 202 -6 278 300 89 0 chr2 180977384 180977474 -72279109 - L2 LINE L2 -36 3236 3139 5692 93 6 4 chr2 180977899 180978694 -72277889 - L1PB2 LINE L1 -3 6148 5352 724 173 0 0 chr2 180978832 180978942 -72277641 + FRAM SINE Alu 41 150 -26 1959 76 0 69 chr2 180978943 180979232 -72277351 + L1PA10 LINE L1 5896 6164 -4 22 0 0 0 chr2 180979252 180979274 -72277309 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 180980361 180980383 -72276200 + AT_rich Low_complexity Low_complexity 1 22 0 201 261 0 0 chr2 180980741 180980787 -72275796 + (TG)n Simple_repeat Simple_repeat 1 46 0 1565 73 0 20 chr2 180981046 180981250 -72275333 - AluSg/x SINE Alu -10 300 101 976 175 143 0 chr2 180982376 180982565 -72274018 + MER58A DNA MER1_type 3 218 -6 468 188 222 28 chr2 180982629 180982773 -72273810 - MLT1G LTR MaLR 0 590 419 215 77 0 26 chr2 180982803 180982842 -72273741 + (TC)n Simple_repeat Simple_repeat 1 38 0 650 246 40 17 chr2 180982989 180983164 -72273419 - MLT1G1 LTR MaLR -415 180 2 17469 118 19 42 chr2 180983815 180986611 -72269972 - Tigger4(Zombi) DNA MER2_type 0 2731 1 482 46 15 0 chr2 180987180 180987245 -72269338 + (CA)n Simple_repeat Simple_repeat 2 67 0 8573 227 69 29 chr2 180988392 180989288 -72267295 - L1MEc LINE L1 -1198 5017 4158 3624 100 17 20 chr2 180989288 180989830 -72266753 - L1MA5A LINE L1 -5 6292 5753 8573 227 69 29 chr2 180989830 180990321 -72266262 - L1MEc LINE L1 -2057 4158 3688 2106 92 0 0 chr2 180990321 180990583 -72266000 + AluSx SINE Alu 29 290 -22 8573 227 69 29 chr2 180990583 180991289 -72265294 - L1MEc LINE L1 -2527 3688 3011 2197 195 8 6 chr2 180991289 180991653 -72264930 + MLT1A1 LTR MaLR 1 365 0 8573 227 69 29 chr2 180991653 180992417 -72264166 - L1MEc LINE L1 -3204 3011 2072 4229 263 65 46 chr2 180992421 180992905 -72263678 - L1MEc LINE L1 -4527 1869 1396 2566 68 0 0 chr2 180992905 180993216 -72263367 - AluY SINE Alu 0 311 1 4229 263 65 46 chr2 180993216 180994426 -72262157 - L1MEc LINE L1 -5000 1396 142 902 141 82 0 chr2 180994441 180994606 -72261977 - AluSg/x SINE Alu 0 312 137 390 252 9 17 chr2 180994607 180994722 -72261861 - L1MEc LINE L1 -6261 135 22 531 345 11 7 chr2 180994773 180995057 -72261526 - L1ME4a LINE L1 -281 5840 5556 1076 160 0 0 chr2 180995851 180996007 -72260576 + AluSg/x SINE Alu 135 290 -22 509 229 29 93 chr2 180996110 180996315 -72260268 - L1MC5 LINE L1 -46 7915 7724 2335 78 0 0 chr2 180997713 180998006 -72258577 + AluY SINE Alu 1 293 -18 585 283 153 9 chr2 180998150 180998373 -72258210 + MIR SINE MIR 1 255 -7 23 0 0 0 chr2 180999059 180999082 -72257501 + AT_rich Low_complexity Low_complexity 1 23 0 1727 159 14 22 chr2 180999082 180999359 -72257224 - AluJb SINE Alu -21 291 17 1867 143 43 0 chr2 180999362 180999641 -72256942 + AluSc SINE Alu 1 291 -18 1231 265 106 10 chr2 181000645 181001049 -72255534 - MER39 LTR ERV1 0 707 265 2060 240 102 42 chr2 181001331 181002065 -72254518 - MER20B DNA MER1_type 0 783 6 2896 84 5 41 chr2 181003754 181004169 -72252414 - L1MA2 LINE L1 0 6304 5905 367 233 47 0 chr2 181004396 181004482 -72252101 - MLT1H1 LTR MaLR 0 555 466 660 237 160 72 chr2 181004676 181004825 -72251758 + Charlie8 DNA MER1_type 7 141 -2276 442 116 0 0 chr2 181004825 181004894 -72251689 + L1PA14 LINE L1 6091 6159 -2 660 237 160 72 chr2 181004894 181005107 -72251476 + Charlie8 DNA MER1_type 141 401 -2016 340 145 48 0 chr2 181005203 181005265 -72251318 + Charlie8 DNA MER1_type 255 2406 -11 1186 237 163 7 chr2 181005459 181005585 -72250998 + MLT1G1 LTR MaLR 15 120 -475 2376 135 53 0 chr2 181005585 181005941 -72250642 + THE1C LTR MaLR 1 375 0 1186 237 163 7 chr2 181005941 181006263 -72250320 + MLT1G1 LTR MaLR 120 584 -11 1171 301 78 38 chr2 181006288 181006839 -72249744 + MLT1K LTR MaLR 14 586 -2 4606 197 40 38 chr2 181006892 181007327 -72249256 - L1MC4 LINE L1 0 8042 7609 2073 139 85 62 chr2 181007327 181007714 -72248869 - MSTD LTR MaLR 0 396 1 4606 197 40 38 chr2 181007714 181008379 -72248204 - L1MC4 LINE L1 -433 7609 6940 760 284 44 9 chr2 181008395 181008620 -72247963 + MIR SINE MIR 13 245 -17 1021 131 0 16 chr2 181009053 181009062 -72247521 + (TTCC)n Simple_repeat Simple_repeat 1 188 0 1021 131 0 16 chr2 181009062 181009245 -72247338 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 233 380 16 0 chr2 181009488 181009609 -72246974 + L2 LINE L2 2587 2709 -605 285 293 268 30 chr2 181009730 181009928 -72246655 - MIR SINE MIR -10 252 8 611 339 136 26 chr2 181010400 181011049 -72245534 + L2 LINE L2 1380 2099 -1215 26 0 0 0 chr2 181011060 181011086 -72245497 + AT_rich Low_complexity Low_complexity 1 26 0 6489 91 66 3 chr2 181011086 181012199 -72244384 - L1PA10 LINE L1 -3 6165 5017 2654 150 94 2 chr2 181012653 181013067 -72243516 + LTR47A LTR ERVL 1 452 0 399 21 0 0 chr2 181013067 181013115 -72243468 + (TG)n Simple_repeat Simple_repeat 1 48 0 247 146 0 24 chr2 181013827 181013868 -72242715 - MLT1L LTR MaLR 0 615 576 537 359 51 9 chr2 181013960 181014275 -72242308 - LTR16C LTR ERVL 0 491 164 335 236 98 24 chr2 181014587 181014710 -72241873 - L1MC4a LINE L1 -1470 6338 6207 250 235 0 61 chr2 181014878 181014993 -72241590 + L1MC4a LINE L1 5256 5363 -2445 442 145 0 0 chr2 181015007 181015076 -72241507 + L1MC4a LINE L1 5420 5488 -2320 432 267 126 3 chr2 181015060 181015262 -72241321 + L1MC4a LINE L1 5721 5897 -1911 * 243 0 0 0 chr2 181015262 181015289 -72241294 + (TG)n Simple_repeat Simple_repeat 2 28 0 432 267 126 3 chr2 181015289 181015447 -72241136 + L1MC4a LINE L1 5897 6172 -1636 468 257 37 22 chr2 181015456 181015592 -72240991 + L1MA10 LINE L1 6183 6320 -14 22 56 0 0 chr2 181015649 181015685 -72240898 + AT_rich Low_complexity Low_complexity 1 36 0 740 279 152 22 chr2 181015686 181015962 -72240621 + MLT1G1 LTR MaLR 1 312 -283 * 1215 141 173 5 chr2 181015937 181016157 -72240426 - LTR47A LTR ERVL -195 257 1 804 275 92 8 chr2 181016307 181016547 -72240036 + MLT1G1 LTR MaLR 332 591 -4 350 233 86 58 chr2 181016551 181016727 -72239856 + MLT1G1-int LTR MaLR 1 181 -1229 22 35 0 0 chr2 181017133 181017162 -72239421 + AT_rich Low_complexity Low_complexity 1 29 0 248 380 39 0 chr2 181017214 181017393 -72239190 + MLT1G1-int LTR MaLR 699 884 -487 290 327 32 92 chr2 181017583 181017800 -72238783 + MLT1G1-int LTR MaLR 1022 1225 -146 676 175 9 0 chr2 181017811 181017925 -72238658 - L1ME LINE L1 -486 5680 5566 1437 268 80 43 chr2 181018060 181018598 -72237985 + MLT1G1 LTR MaLR 1 558 -37 2614 231 49 21 chr2 181018631 181019349 -72237234 - L1ME1 LINE L1 -1 6165 5428 191 36 36 0 chr2 181021305 181021333 -72235250 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 243 61 0 0 chr2 181023297 181023330 -72233253 + (GGA)n Simple_repeat Simple_repeat 2 34 0 391 344 5 60 chr2 181023409 181023554 -72233029 - L2 LINE L2 -187 3085 2954 1998 280 57 54 chr2 181023554 181024244 -72232339 - MER115 DNA AcHobo -1 692 1 391 344 5 60 chr2 181024244 181024316 -72232267 - L2 LINE L2 -318 2954 2880 198 0 0 0 chr2 181025931 181025953 -72230630 + (T)n Simple_repeat Simple_repeat 1 22 0 353 291 58 0 chr2 181027115 181027218 -72229365 - L2 LINE L2 -8 3305 3197 195 42 0 0 chr2 181028269 181028293 -72228290 + (A)n Simple_repeat Simple_repeat 1 24 0 2367 72 0 7 chr2 181029742 181030035 -72226548 - AluY SINE Alu -20 291 1 314 277 116 9 chr2 181030612 181030724 -72225859 - L2 LINE L2 0 3313 3190 685 225 138 14 chr2 181030920 181031138 -72225445 - MER102a DNA MER1_type -14 316 72 834 253 49 30 chr2 181031144 181031449 -72225134 + L1MC4a LINE L1 5661 5971 -1837 205 282 0 29 chr2 181031482 181031585 -72224998 + (TA)n Simple_repeat Simple_repeat 2 101 0 992 268 60 60 chr2 181032815 181033311 -72223272 - LTR33 LTR ERVL 0 521 26 38 39 0 0 chr2 181033565 181033617 -72222966 + AT_rich Low_complexity Low_complexity 1 52 0 1918 204 13 0 chr2 181035400 181035773 -72220810 + L1PA16 LINE L1 5768 6145 -21 491 243 76 15 chr2 181036201 181036395 -72220188 + MIR SINE MIR 7 200 -62 520 279 96 68 chr2 181037102 181037308 -72219275 + L2 LINE L2 2813 3029 -284 1876 149 7 0 chr2 181037308 181037603 -72218980 + AluJb SINE Alu 1 297 -15 520 279 96 68 chr2 181037603 181037647 -72218936 + L2 LINE L2 3029 3070 -243 1019 189 42 14 chr2 181037731 181037943 -72218640 - MER63C DNA MER1_type 0 930 713 1050 156 19 24 chr2 181037944 181038149 -72218434 - MER20 DNA MER1_type -14 205 2 2292 225 102 2 chr2 181038150 181038727 -72217856 - MER63C DNA MER1_type -236 694 60 305 156 111 22 chr2 181038740 181038830 -72217753 - MER63C DNA MER1_type -821 109 12 444 254 63 63 chr2 181038846 181038972 -72217611 - L2 LINE L2 -1 3312 3187 301 170 19 123 chr2 181038982 181039088 -72217495 + L2 LINE L2 3121 3215 -98 1459 78 122 0 chr2 181040289 181040494 -72216089 - MER30 DNA MER1_type 0 230 1 1345 255 115 61 chr2 181041678 181042381 -72214202 + MER20B DNA MER1_type 43 783 0 909 233 41 93 chr2 181043891 181044351 -72212232 - MLT1G LTR MaLR -73 482 32 1692 180 17 13 chr2 181044742 181045042 -72211541 - AluJb SINE Alu -11 301 1 432 0 0 0 chr2 181045104 181045152 -72211431 + (TCCA)n Simple_repeat Simple_repeat 3 50 0 2169 119 0 0 chr2 181045796 181046098 -72210485 + AluSg SINE Alu 2 303 -7 2213 108 6 16 chr2 181046991 181047307 -72209276 + AluSp SINE Alu 1 313 0 784 372 9 0 chr2 181048006 181048331 -72208252 + ERVL LTR ERVL 3471 3798 -1966 192 176 15 88 chr2 181048332 181048400 -72208183 + L3 LINE CR1 1446 1508 -69 327 260 30 20 chr2 181048513 181048613 -72207970 + ERVL LTR ERVL 4032 4132 -1632 360 290 22 29 chr2 181048618 181048756 -72207827 + ERVL LTR ERVL 4926 5062 -702 1913 174 105 14 chr2 181048894 181049257 -72207326 + MSTD LTR MaLR 1 396 0 331 326 51 7 chr2 181049684 181049822 -72206761 - MIR3 SINE MIR -46 162 19 699 231 103 30 chr2 181050186 181050389 -72206194 + MIR SINE MIR 13 230 -32 185 375 11 0 chr2 181050855 181050943 -72205640 - MER5A DNA MER1_type 0 189 101 2005 117 29 0 chr2 181051066 181051359 -72205224 + AluSx SINE Alu 1 301 0 197 326 0 0 chr2 181051365 181051411 -72205172 + MER5A DNA MER1_type 144 189 0 870 275 160 9 chr2 181052099 181052536 -72204047 + L1MC4a LINE L1 5382 5884 -1924 891 218 32 32 chr2 181052543 181052763 -72203820 - MIR SINE MIR -30 232 13 25 0 0 0 chr2 181053145 181053170 -72203413 + AT_rich Low_complexity Low_complexity 1 25 0 605 206 51 89 chr2 181054325 181054539 -72202044 + MIR SINE MIR 7 212 -50 224 119 0 24 chr2 181056065 181056107 -72200476 + (TTTC)n Simple_repeat Simple_repeat 4 44 0 304 327 115 0 chr2 181056584 181056688 -72199895 + MIR3 SINE MIR 84 199 -9 197 162 54 0 chr2 181057354 181057391 -72199192 + L2 LINE L2 3017 3055 -217 222 309 46 13 chr2 181057646 181057798 -72198785 + MER5B DNA MER1_type 20 176 -2 388 186 85 39 chr2 181057925 181058054 -72198529 + L1ME LINE L1 5567 5701 -420 231 254 48 0 chr2 181058075 181058138 -72198445 + L1ME LINE L1 5754 5819 -302 858 267 111 0 chr2 181059931 181060156 -72196427 - MIR SINE MIR -1 261 12 1959 148 37 34 chr2 181061578 181061930 -72194653 + THE1B LTR MaLR 2 354 -10 289 299 30 60 chr2 181062667 181062801 -72193782 - MIR3 SINE MIR -37 171 42 297 258 0 72 chr2 181062812 181062909 -72193674 + MIR3 SINE MIR 112 201 -7 5298 174 15 72 chr2 181063270 181063978 -72192605 - MER45B DNA AcHobo -541 1040 415 1989 161 0 0 chr2 181063978 181064288 -72192295 + AluSx SINE Alu 1 310 -2 5298 174 15 72 chr2 181064288 181064681 -72191902 - MER45B DNA AcHobo -1166 415 1 5869 45 0 1 chr2 181065097 181065763 -72190820 + L1PA8 LINE L1 5508 6172 0 3804 228 38 36 chr2 181066695 181068079 -72188504 + L1ME1 LINE L1 4795 6334 0 202 252 46 13 chr2 181068543 181068694 -72187889 + (TA)n Simple_repeat Simple_repeat 1 156 0 862 273 21 21 chr2 181069404 181069642 -72186941 + MIR SINE MIR 2 239 -23 5034 155 11 16 chr2 181069989 181071503 -72185080 - L1MA7 LINE L1 -172 6119 4613 317 290 61 15 chr2 181071727 181071858 -72184725 - MIR SINE MIR -3 259 123 2077 157 146 11 chr2 181071858 181072235 -72184348 + MSTA LTR MaLR 1 428 0 9685 132 18 65 chr2 181072237 181073893 -72182690 + MSTA-int LTR MaLR 3 1580 0 1449 170 186 16 chr2 181073893 181074211 -72182372 + MSTA LTR MaLR 1 372 -56 4244 205 72 20 chr2 181074229 181074346 -72182237 + L1MC4 LINE L1 6951 7060 -982 180 77 0 0 chr2 181074346 181074372 -72182211 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 4244 205 72 20 chr2 181074372 181075292 -72181291 + L1MC4 LINE L1 7060 8042 0 255 341 56 24 chr2 181075459 181075585 -72180998 + L2 LINE L2 3142 3271 -1 588 291 109 5 chr2 181076375 181076585 -72179998 - MIR SINE MIR -2 260 29 216 329 121 44 chr2 181077743 181078108 -72178475 + L3b LINE CR1 1106 1498 -85 2159 28 45 0 chr2 181078590 181078837 -72177746 + L1PA8 LINE L1 5912 6169 -3 32 43 0 0 chr2 181079406 181079452 -72177131 + AT_rich Low_complexity Low_complexity 1 46 0 231 36 0 0 chr2 181079533 181079561 -72177022 + (TTTC)n Simple_repeat Simple_repeat 1 28 0 1958 118 4 7 chr2 181079563 181079842 -72176741 - AluSx SINE Alu -34 278 1 411 211 44 35 chr2 181081129 181081243 -72175340 - MIR SINE MIR -10 252 138 297 222 148 65 chr2 181081668 181081776 -72174807 - MIR SINE MIR -114 148 32 410 294 113 31 chr2 181082203 181082363 -72174220 + MIR SINE MIR 28 200 -62 182 285 192 31 chr2 181083021 181083151 -72173432 - L2 LINE L2 0 3272 3122 290 239 45 45 chr2 181084231 181084319 -72172264 - MIR SINE MIR -95 167 80 412 266 111 54 chr2 181085030 181085380 -72171203 + L1PA15 LINE L1 5556 5925 -240 * 2285 205 54 10 chr2 181085091 181085608 -72170975 + L1ME2 LINE L1 5623 6162 -2 1072 161 57 0 chr2 181085658 181085869 -72170714 + L1MB7 LINE L1 5946 6168 -16 273 315 93 90 chr2 181086008 181086287 -72170296 + L2 LINE L2 2992 3271 -1 246 319 163 36 chr2 181086402 181086568 -72170015 - MER5A DNA MER1_type -2 187 1 427 267 122 0 chr2 181088564 181088736 -72167847 + MIR SINE MIR 70 262 0 804 132 0 31 chr2 181091155 181091284 -72165299 - MLT2D LTR ERVL -289 125 1 4526 101 2 2 chr2 181092049 181092646 -72163937 + L1PA15 LINE L1 5564 6160 -5 1925 159 38 54 chr2 181092777 181093148 -72163435 - MLT1A1 LTR MaLR 0 365 1 21 57 0 0 chr2 181093507 181093542 -72163041 + AT_rich Low_complexity Low_complexity 1 35 0 349 309 31 41 chr2 181093874 181094068 -72162515 - MIR SINE MIR -50 212 21 2258 23 23 0 chr2 181096447 181096703 -72159880 - L1PA4 LINE L1 -1 6154 5893 245 232 0 98 chr2 181096978 181097060 -72159523 - MARNA DNA Mariner -75 511 438 338 266 79 22 chr2 181097240 181097379 -72159204 + L2 LINE L2 3165 3311 -2 1241 185 46 52 chr2 181097598 181097922 -72158661 - MER33 DNA MER1_type 0 324 3 242 236 18 0 chr2 181098314 181098369 -72158214 - L2 LINE L2 -826 2488 2433 320 330 88 5 chr2 181098395 181098589 -72157994 - L2 LINE L2 -1129 2185 1976 231 321 0 0 chr2 181099050 181099134 -72157449 + L1MC/D LINE L1 5743 5826 -507 203 163 20 41 chr2 181099257 181099306 -72157277 + (CATATA)n Simple_repeat Simple_repeat 1 48 0 33536 104 10 54 chr2 181100207 181106645 -72149938 - L1PA7 LINE L1 0 6154 12 1186 140 0 0 chr2 181106662 181106826 -72149757 - AluSp SINE Alu -20 293 130 1746 239 56 94 chr2 181111458 181111732 -72144851 - MER21B LTR ERV1 -109 754 471 1593 178 47 13 chr2 181111732 181112030 -72144553 - AluJb SINE Alu -4 308 1 1746 239 56 94 chr2 181112030 181112539 -72144044 - MER21B LTR ERV1 -392 471 1 334 302 94 27 chr2 181112556 181112705 -72143878 - L2 LINE L2 -928 2386 2228 1480 198 60 0 chr2 181112909 181113217 -72143366 - MER58B DNA MER1_type -17 324 1 1004 278 34 6 chr2 181113445 181113772 -72142811 + L2 LINE L2 1998 2333 -981 235 291 33 71 chr2 181113800 181114010 -72142573 + L2 LINE L2 2467 2668 -646 643 173 26 77 chr2 181114036 181114192 -72142391 - L1MC2 LINE L1 0 6344 6197 1236 219 118 35 chr2 181114192 181114558 -72142025 + MSTD LTR MaLR 1 396 0 678 53 21 11 chr2 181114660 181114755 -72141828 - AluY SINE Alu -23 288 193 2180 133 3 3 chr2 181114844 181115153 -72141430 + AluSg SINE Alu 1 309 -1 204 361 24 36 chr2 181115389 181115555 -72141028 - MIR3 SINE MIR -6 202 39 207 0 0 0 chr2 181115574 181115597 -72140986 + (TTCA)n Simple_repeat Simple_repeat 4 26 0 318 174 23 12 chr2 181115599 181115685 -72140898 + CT-rich Low_complexity Low_complexity 3 89 0 2156 99 7 3 chr2 181117139 181117441 -72139142 + AluSx SINE Alu 1 303 -9 2428 82 3 0 chr2 181117446 181117752 -72138831 + AluSq SINE Alu 1 307 -6 289 296 88 25 chr2 181117845 181118004 -72138579 - L1ME LINE L1 -325 5796 5628 1632 192 10 0 chr2 181118601 181118898 -72137685 - AluJo SINE Alu -2 310 11 1000 235 41 0 chr2 181120165 181120361 -72136222 + MER63A DNA MER1_type 1 204 -6 215 307 61 9 chr2 181120495 181120609 -72135974 - L2 LINE L2 -14 3299 3180 2246 133 33 25 chr2 181120944 181121305 -72135278 - THE1B LTR MaLR 0 364 1 246 155 71 71 chr2 181121634 181121718 -72134865 + MIR SINE MIR 60 143 -65 406 228 43 0 chr2 181122134 181122226 -72134357 + MER81 DNA DNA 1 96 -18 498 290 47 0 chr2 181122382 181122575 -72134008 + MIR SINE MIR 59 260 -2 2136 127 0 0 chr2 181122878 181123170 -72133413 - AluSx SINE Alu -14 298 7 375 226 11 11 chr2 181123705 181123798 -72132785 + MER103 DNA DNA 72 164 -2 216 0 0 0 chr2 181124032 181124056 -72132527 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 2012 122 7 0 chr2 181124070 181124349 -72132234 - AluSc SINE Alu -28 281 1 1970 147 0 7 chr2 181124940 181125233 -72131350 + AluSx SINE Alu 2 292 -20 2336 89 0 0 chr2 181125953 181126246 -72130337 - AluSc SINE Alu -16 293 1 323 258 59 118 chr2 181126827 181127048 -72129535 + LTR16A LTR ERVL 243 450 0 1873 161 0 3 chr2 181127162 181127467 -72129116 + AluSx SINE Alu 1 304 0 442 281 40 40 chr2 181127904 181128132 -72128451 - L2 LINE L2 -4 3309 3082 365 258 154 71 chr2 181128816 181129180 -72127403 + MLT1K LTR MaLR 139 532 -56 1933 141 3 3 chr2 181129330 181129627 -72126956 - AluSx SINE Alu -5 307 11 2304 98 3 10 chr2 181130104 181130411 -72126172 + AluSx SINE Alu 1 305 -7 315 105 0 0 chr2 181130722 181130779 -72125804 + (TC)n Simple_repeat Simple_repeat 2 58 0 189 0 0 0 chr2 181130781 181130802 -72125781 + (CA)n Simple_repeat Simple_repeat 1 21 0 205 300 92 33 chr2 181130844 181130964 -72125619 + L2 LINE L2 3141 3267 -5 332 308 49 28 chr2 181131036 181131283 -72125300 - L1ME4a LINE L1 -241 5880 5629 29 0 0 0 chr2 181131595 181131624 -72124959 + AT_rich Low_complexity Low_complexity 1 29 0 2375 112 0 0 chr2 181133542 181133854 -72122729 + AluSq SINE Alu 1 312 -1 2256 117 0 0 chr2 181136868 181137168 -72119415 - AluSq SINE Alu -13 300 1 282 226 57 16 chr2 181137420 181137561 -72119022 - MLT1L LTR MaLR -77 538 339 315 269 0 0 chr2 181137609 181137687 -72118896 - L2 LINE L2 0 3272 3195 573 262 76 38 chr2 181137702 181137939 -72118644 - MLT1L LTR MaLR -297 318 73 325 274 24 0 chr2 181137972 181138056 -72118527 - L2 LINE L2 0 3272 3187 1725 135 20 61 chr2 181139667 181139997 -72116586 + AluJb SINE Alu 1 318 0 2979 167 14 63 chr2 181140116 181140286 -72116297 - L1MC3 LINE L1 -7 7778 7601 1704 179 3 24 chr2 181140286 181140583 -72116000 - AluJo SINE Alu -21 291 1 2979 167 14 63 chr2 181140583 181141059 -72115524 - L1MC3 LINE L1 -184 7601 7164 251 309 21 11 chr2 181141513 181141607 -72114976 + MIR SINE MIR 57 151 -57 1171 263 46 3 chr2 181141691 181142014 -72114569 + MER46C DNA MER2_type 1 337 -1 1844 171 7 0 chr2 181143933 181144238 -72112345 - AluJb SINE Alu -5 307 1 2239 117 0 0 chr2 181144902 181145200 -72111383 - AluSx SINE Alu -14 298 1 1292 192 187 23 chr2 181145871 181146256 -72110327 - MLT1C LTR MaLR -19 448 1 1920 198 64 47 chr2 181147604 181148054 -72108529 - MLT1E3 LTR MaLR -164 460 3 1738 167 3 41 chr2 181148208 181148525 -72108058 + AluJb SINE Alu 3 307 -5 380 85 0 0 chr2 181148583 181148630 -72107953 + U6 snRNA snRNA 1 47 -60 453 221 0 0 chr2 181148914 181149000 -72107583 - L1PA8 LINE L1 -4 6168 6083 416 216 58 29 chr2 181149022 181149161 -72107422 - L1ME4a LINE L1 -15 6106 5964 520 229 141 73 chr2 181149184 181149880 -72106703 - LTR41 LTR ERVL -2 793 19 789 293 26 24 chr2 181149885 181149987 -72106596 - L1ME4a LINE L1 -195 5926 5826 189 74 0 0 chr2 181149987 181150014 -72106569 + (TA)n Simple_repeat Simple_repeat 1 27 0 2576 40 0 7 chr2 181150014 181150317 -72106266 - AluY SINE Alu -10 301 1 789 293 26 24 chr2 181150317 181150578 -72106005 - L1ME4a LINE L1 -294 5827 5562 302 277 7 58 chr2 181150980 181151135 -72105448 + GA-rich Low_complexity Low_complexity 4 150 0 183 156 0 0 chr2 181151156 181151188 -72105395 + A-rich Low_complexity Low_complexity 1 32 0 1770 135 47 17 chr2 181153940 181154236 -72102347 + AluJo SINE Alu 1 305 -7 1843 186 0 0 chr2 181154543 181154849 -72101734 - AluJo SINE Alu -4 308 3 2378 165 23 46 chr2 181155288 181155766 -72100817 - MLT1C LTR MaLR 0 467 1 2418 137 75 10 chr2 181156147 181156549 -72100034 - MSTA LTR MaLR 0 428 1 2198 92 0 7 chr2 181156777 181157147 -72099436 - AluSc SINE Alu 0 368 1 252 247 99 0 chr2 181157170 181157251 -72099332 - L3b LINE CR1 -206 1377 1289 238 339 28 0 chr2 181157362 181157471 -72099112 + GA-rich Low_complexity Low_complexity 2 113 0 218 294 0 15 chr2 181158045 181158113 -72098470 + L2 LINE L2 3247 3313 0 2309 52 56 0 chr2 181158565 181158851 -72097732 + AluY SINE Alu 1 302 -9 712 100 0 0 chr2 181158754 181158854 -72097729 + AluY SINE Alu 206 305 -6 371 181 14 14 chr2 181158859 181158931 -72097652 + AluJ/FLAM SINE Alu 1 72 -230 24 0 0 0 chr2 181158981 181159005 -72097578 + AT_rich Low_complexity Low_complexity 1 24 0 212 98 0 49 chr2 181159802 181159843 -72096740 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 1585 166 46 21 chr2 181160676 181160960 -72095623 + AluJb SINE Alu 1 291 -21 615 27 0 0 chr2 181163017 181163090 -72093493 + (TTTC)n Simple_repeat Simple_repeat 4 76 0 2093 106 7 0 chr2 181164483 181164786 -72091797 - AluSx SINE Alu 0 305 1 23 0 0 0 chr2 181166281 181166304 -72090279 + AT_rich Low_complexity Low_complexity 1 23 0 955 213 37 37 chr2 181166767 181167011 -72089572 + MIR SINE MIR 8 251 -11 22 0 0 0 chr2 181167711 181167733 -72088850 + AT_rich Low_complexity Low_complexity 1 22 0 245 321 90 15 chr2 181168377 181168511 -72088072 - L2 LINE L2 -2 3270 3127 4950 133 27 111 chr2 181168644 181169783 -72086800 - L1MA8 LINE L1 -5 6286 5053 2423 112 18 68 chr2 181169783 181170166 -72086417 - THE1B LTR MaLR 0 364 1 4950 133 27 111 chr2 181170166 181170336 -72086247 - L1MA8 LINE L1 -1238 5053 4870 1959 152 3 0 chr2 181170336 181170643 -72085940 + AluSx SINE Alu 1 308 0 4950 133 27 111 chr2 181170643 181170680 -72085903 - L1MA8 LINE L1 -1421 4870 5064 1758 156 31 21 chr2 181170680 181170968 -72085615 - AluJb SINE Alu -21 291 1 180 270 26 113 chr2 181171702 181171817 -72084766 - L2 LINE L2 -37 3276 3172 2250 104 3 13 chr2 181172003 181172310 -72084273 + AluSc SINE Alu 1 304 -5 810 236 240 0 chr2 181172432 181172674 -72083909 - MLT1G3 LTR MaLR -4 526 227 1322 279 26 23 chr2 181172711 181173101 -72083482 - MLT1G1 LTR MaLR -200 395 5 216 125 0 0 chr2 181173105 181173137 -72083446 + L2 LINE L2 3282 3313 0 593 247 24 7 chr2 181173379 181173546 -72083037 - MLT1G LTR MaLR 0 590 430 635 234 43 49 chr2 181174377 181174561 -72082022 + MIR SINE MIR 36 218 -44 300 323 115 54 chr2 181174576 181174836 -72081747 - L2 LINE L2 -1 3312 3037 190 163 163 20 chr2 181175711 181175760 -72080823 + MIR SINE MIR 19 74 -134 630 269 98 10 chr2 181175790 181175983 -72080600 - MIR SINE MIR -6 256 47 21 0 0 0 chr2 181176186 181176207 -72080376 + AT_rich Low_complexity Low_complexity 1 21 0 1636 216 238 17 chr2 181176208 181176671 -72079912 + MLT1F1 LTR MaLR 3 567 0 249 337 95 30 chr2 181177069 181177238 -72079345 - MIR3 SINE MIR -13 195 16 183 114 0 0 chr2 181178280 181178315 -72078268 + (A)n Simple_repeat Simple_repeat 1 35 0 261 264 11 35 chr2 181178990 181179077 -72077506 + L2 LINE L2 2443 2527 -787 276 30 0 0 chr2 181179091 181179124 -72077459 + (TG)n Simple_repeat Simple_repeat 2 34 0 225 0 0 0 chr2 181179123 181179148 -72077435 + (TA)n Simple_repeat Simple_repeat 2 26 0 * 911 207 52 168 chr2 181179189 181179647 -72076936 + L2 LINE L2 2533 2937 -377 204 241 12 24 chr2 181179712 181179795 -72076788 + L2 LINE L2 3107 3188 -125 * 1280 302 41 15 chr2 181179788 181180248 -72076335 - L2 LINE L2 -690 2624 2153 1116 300 30 8 chr2 181180388 181180755 -72075828 - L2 LINE L2 -1823 1491 1117 1066 169 16 0 chr2 181180755 181180938 -72075645 + L1MB1 LINE L1 5983 6168 0 181 71 0 71 chr2 181181030 181181072 -72075511 + (TAAAAA)n Simple_repeat Simple_repeat 2 40 0 1772 112 19 12 chr2 181181168 181181427 -72075156 + AluSx SINE Alu 1 261 -51 2305 265 64 51 chr2 181181429 181182384 -72074199 - L2 LINE L2 -284 3029 2066 211 171 0 0 chr2 181182403 181182438 -72074145 - L2 LINE L2 -2477 837 803 600 289 162 32 chr2 181182510 181182918 -72073665 - L2 LINE L2 -2514 800 340 38 0 0 0 chr2 181182920 181182958 -72073625 + AT_rich Low_complexity Low_complexity 1 38 0 3237 88 64 0 chr2 181182958 181183413 -72073170 - L1MA3 LINE L1 0 6305 5822 245 314 34 25 chr2 181184320 181184438 -72072145 + MIR SINE MIR 18 136 -72 245 313 87 18 chr2 181184922 181185039 -72071544 - MIR SINE MIR -82 126 3 257 260 240 0 chr2 181187841 181187945 -72068638 + L1MC4 LINE L1 7811 7939 -103 286 284 12 12 chr2 181188177 181188258 -72068325 - L2 LINE L2 0 3313 3233 717 188 43 0 chr2 181188702 181188839 -72067744 + AluSg/x SINE Alu 160 301 0 2172 124 3 0 chr2 181190315 181190614 -72065969 - AluSq SINE Alu -13 300 1 807 174 0 0 chr2 181191121 181191296 -72065287 + AluJb SINE Alu 164 312 0 438 79 0 0 chr2 181191473 181191536 -72065047 + (CA)n Simple_repeat Simple_repeat 2 64 0 547 248 182 28 chr2 181192371 181192585 -72063998 - MIR SINE MIR 0 262 16 1374 165 0 36 chr2 181192985 181193112 -72063471 - L1MB3 LINE L1 -11 6172 6057 1545 94 0 0 chr2 181193112 181193303 -72063280 - AluY SINE Alu -120 191 1 1374 165 0 36 chr2 181193303 181193423 -72063160 - L1MB3 LINE L1 -126 6057 5934 400 327 74 18 chr2 181193820 181194037 -72062546 - MIR SINE MIR -32 230 2 212 270 175 51 chr2 181194173 181194272 -72062311 - MIR3 SINE MIR -29 179 57 590 103 0 0 chr2 181194272 181194350 -72062233 - MADE1 DNA Mariner -2 78 1 212 270 175 51 chr2 181194350 181194387 -72062196 - MIR3 SINE MIR -151 57 26 1958 145 7 3 chr2 181194746 181195056 -72061527 - AluJo SINE Alu -1 311 1 288 305 126 20 chr2 181195115 181195266 -72061317 + MIR SINE MIR 65 231 -31 623 198 18 0 chr2 181195493 181195604 -72060979 + MER81 DNA DNA 1 113 -1 1570 249 142 12 chr2 181197614 181198127 -72058456 - MLT1L LTR MaLR -7 608 29 981 136 7 0 chr2 181198152 181198306 -72058277 + MER41A LTR ERV1 400 554 0 5335 137 59 13 chr2 181198306 181199213 -72057370 + MER41A-int LTR ERV1 1 859 -5087 2733 161 54 77 chr2 181199251 181199326 -72057257 + MER41A-int LTR ERV1 3129 3204 -4612 1893 95 43 89 chr2 181199326 181199651 -72056932 - AluSg SINE Alu 0 310 1 2733 161 54 77 chr2 181199651 181199687 -72056896 + MER41A-int LTR ERV1 3204 3239 -4577 231 36 0 0 chr2 181199687 181199715 -72056868 + (TC)n Simple_repeat Simple_repeat 1 28 0 2733 161 54 77 chr2 181199715 181200248 -72056335 + MER41A-int LTR ERV1 3239 3759 -4057 * 13294 98 20 12 chr2 181200235 181200508 -72056075 + MER41A-int LTR ERV1 2856 3125 -2821 2462 77 0 0 chr2 181200508 181200807 -72055776 + AluY SINE Alu 1 299 -12 13294 98 20 12 chr2 181200807 181202810 -72053773 + MER41A-int LTR ERV1 3125 5944 -2 3288 100 11 0 chr2 181202810 181203271 -72053312 + MER41A LTR ERV1 1 466 -88 1462 240 119 3 chr2 181203380 181203767 -72052816 + LTR16A LTR ERVL 18 449 -1 198 0 0 0 chr2 181203953 181203975 -72052608 + (TAA)n Simple_repeat Simple_repeat 1 22 0 470 226 29 10 chr2 181204142 181204244 -72052339 + MER5A DNA MER1_type 9 112 -77 4119 100 3 32 chr2 181205107 181205676 -72050907 - MER41A LTR ERV1 -1 553 1 226 175 0 0 chr2 181205870 181205910 -72050673 + MIR SINE MIR 110 149 -113 722 306 47 13 chr2 181206231 181206466 -72050117 - MLT1J LTR MaLR -268 243 1 272 350 69 51 chr2 181207981 181208370 -72048213 - L2 LINE L2 -50 3222 2827 672 279 148 39 chr2 181208640 181209099 -72047484 - LTR33 LTR ERVL -3 518 10 351 0 0 0 chr2 181209277 181209316 -72047267 + (CA)n Simple_repeat Simple_repeat 2 40 0 614 197 191 0 chr2 181209376 181209528 -72047055 + MER5A DNA MER1_type 9 189 0 553 277 118 62 chr2 181209581 181209971 -72046612 - MLT1J LTR MaLR 0 511 100 1562 163 31 62 chr2 181211565 181211694 -72044889 + MER2 DNA MER2_type 2 133 -212 2162 156 6 0 chr2 181211694 181212040 -72044543 + MER7A DNA MER2_type 1 346 0 1562 163 31 62 chr2 181212040 181212265 -72044318 + MER2 DNA MER2_type 133 345 0 2125 190 14 5 chr2 181212396 181212822 -72043761 + MER65C LTR ERV1 27 456 -5 303 273 139 61 chr2 181214603 181214768 -72041815 + MER5A DNA MER1_type 1 178 0 228 260 0 0 chr2 181215618 181215668 -72040915 - L2 LINE L2 0 3313 3264 916 292 10 7 chr2 181217275 181217563 -72039020 + L1MEc LINE L1 36 324 -6072 2119 252 70 36 chr2 181217584 181217957 -72038626 + L1MEc LINE L1 783 1142 -5254 2480 58 0 10 chr2 181217957 181218251 -72038332 + AluY SINE Alu 13 303 -8 2119 252 70 36 chr2 181218251 181218917 -72037666 + L1MEc LINE L1 1142 1857 -4539 1939 251 36 2 chr2 181218925 181219566 -72037017 + L1MEc LINE L1 2222 2884 -3331 2212 115 0 16 chr2 181219572 181219885 -72036698 + AluSq SINE Alu 1 308 -5 267 298 47 58 chr2 181220746 181220937 -72035646 + MIR SINE MIR 60 248 -14 1805 66 4 4 chr2 181223412 181223640 -72032943 - AluY SINE Alu -12 299 72 313 248 72 76 chr2 181224506 181224756 -72031827 - MLT1L LTR MaLR -4 611 363 246 62 0 0 chr2 181225733 181225765 -72030818 + (TA)n Simple_repeat Simple_repeat 2 33 0 16900 64 57 4 chr2 181226041 181228475 -72028108 - L1P LINE L1 -3579 2567 4 4753 174 16 11 chr2 181228482 181229530 -72027053 - L1 LINE L1 -2068 4078 3025 273 260 0 0 chr2 181230168 181230245 -72026338 + (TA)n Simple_repeat Simple_repeat 2 78 0 26 0 0 0 chr2 181230980 181231006 -72025577 + AT_rich Low_complexity Low_complexity 1 26 0 4090 166 15 1 chr2 181231204 181232006 -72024577 - L1 LINE L1 -1265 4881 4069 7780 17 3 3 chr2 181232015 181233398 -72023185 - L1PA3 LINE L1 -8 6147 4765 1374 117 4 20 chr2 181233500 181233747 -72022836 - L1MC2 LINE L1 -376 5968 5726 569 309 100 16 chr2 181233901 181234075 -72022508 + L2 LINE L2 2921 3079 -234 2453 83 0 0 chr2 181234075 181234377 -72022206 - AluY SINE Alu -9 302 1 569 309 100 16 chr2 181234377 181234522 -72022061 + L2 LINE L2 3079 3267 -46 248 284 64 0 chr2 181234887 181234996 -72021587 + MARNA DNA Mariner 395 510 -76 434 94 0 0 chr2 181235604 181235668 -72020915 + MLT1G1 LTR MaLR 532 595 0 210 208 0 0 chr2 181235734 181235782 -72020801 + GA-rich Low_complexity Low_complexity 1 48 0 254 161 65 0 chr2 181236968 181237030 -72019553 - L1MA8 LINE L1 -227 6064 5999 460 256 33 74 chr2 181238051 181238266 -72018317 + HAL1 LINE L1 2 207 -2300 718 308 76 41 chr2 181238426 181239199 -72017384 + HAL1 LINE L1 533 1332 -1175 447 316 25 0 chr2 181239199 181239357 -72017226 + L2 LINE L2 2290 2451 -863 451 311 157 24 chr2 181239359 181239652 -72016931 + L2 LINE L2 2573 2904 -410 199 316 66 0 chr2 181239631 181239707 -72016876 + L2 LINE L2 3231 3311 -2 * 544 252 20 7 chr2 181239754 181239905 -72016678 + MIR SINE MIR 106 258 -4 618 220 0 0 chr2 181240083 181240224 -72016359 - MER63B DNA MER1_type 0 435 295 2244 124 0 3 chr2 181240224 181240530 -72016053 + AluSq SINE Alu 1 305 -8 603 239 0 0 chr2 181240575 181240692 -72015891 - FLAM_C SINE Alu -16 117 1 586 200 0 0 chr2 181240880 181240985 -72015598 - AluJb SINE Alu -36 276 172 206 216 0 0 chr2 181241265 181241302 -72015281 + polypyrimidine Low_complexity Low_complexity 4 40 0 279 311 125 66 chr2 181241328 181241720 -72014863 - L2 LINE L2 -41 3231 2817 4297 95 16 3 chr2 181242131 181242751 -72013832 - L1PA13 LINE L1 -2 6161 5534 677 275 65 10 chr2 181242781 181242981 -72013602 - MIR SINE MIR -21 241 31 595 252 14 33 chr2 181243197 181243407 -72013176 - AluJo SINE Alu -106 206 1 665 211 15 8 chr2 181243421 181243554 -72013029 - MER5B DNA MER1_type -44 134 1 571 241 80 21 chr2 181243559 181243746 -72012837 - MIR SINE MIR -7 255 58 2397 84 0 3 chr2 181243921 181244220 -72012363 + AluSc SINE Alu 1 298 -11 830 259 113 0 chr2 181244413 181244679 -72011904 - MER63B DNA MER1_type -137 299 4 4387 168 45 12 chr2 181245182 181246432 -72010151 + L1MB4 LINE L1 4891 6179 -1 326 338 14 14 chr2 181298092 181298231 -71958352 - MIR3 SINE MIR -36 172 34 319 305 58 26 chr2 181298890 181299044 -71957539 - MIR3 SINE MIR -16 192 34 24 0 0 0 chr2 181299592 181299616 -71956967 + AT_rich Low_complexity Low_complexity 1 24 0 355 231 151 84 chr2 181300008 181300233 -71956350 - MIR SINE MIR -12 250 11 400 255 118 36 chr2 181300889 181301111 -71955472 + L1ME1 LINE L1 5702 5937 -229 2031 132 0 0 chr2 181301159 181301440 -71955143 + AluSx SINE Alu 1 281 -31 7842 26 0 2 chr2 181301461 181302774 -71953809 - L1PA4 LINE L1 -3 6152 4841 30 0 0 0 chr2 181303000 181303030 -71953553 + AT_rich Low_complexity Low_complexity 1 30 0 195 162 0 0 chr2 181303577 181303614 -71952969 + A-rich Low_complexity Low_complexity 1 37 0 314 310 26 17 chr2 181305581 181305697 -71950886 - L3b LINE CR1 -56 1527 1411 275 283 25 42 chr2 181305816 181305936 -71950647 - MER45A DNA AcHobo -29 149 32 833 223 48 0 chr2 181306138 181306379 -71950204 - L2 LINE L2 -315 2998 2750 1810 161 0 16 chr2 181307135 181307445 -71949138 + AluJo SINE Alu 1 305 -7 753 309 87 17 chr2 181307475 181307821 -71948762 - MLT1J LTR MaLR -8 503 134 1084 234 73 8 chr2 181309120 181309559 -71947024 - L2 LINE L2 -95 3218 2751 522 215 194 0 chr2 181309560 181309704 -71946879 - L2 LINE L2 -764 2550 2379 2026 154 0 0 chr2 181310076 181310374 -71946209 - AluSx SINE Alu -14 298 1 1945 160 0 6 chr2 181312173 181312486 -71944097 - AluJo SINE Alu -1 311 1 2162 116 0 26 chr2 181313102 181313413 -71943170 + AluSx SINE Alu 1 303 -9 2599 64 0 0 chr2 181313593 181313904 -71942679 + AluY SINE Alu 1 311 0 192 191 64 0 chr2 181314976 181315023 -71941560 - L2 LINE L2 0 3313 3264 226 277 36 48 chr2 181315820 181315903 -71940680 + L2 LINE L2 3222 3303 -10 872 179 18 103 chr2 181317985 181318208 -71938375 + MLT1A2 LTR MaLR 1 204 -170 25 0 0 0 chr2 181318239 181318264 -71938319 + AT_rich Low_complexity Low_complexity 1 25 0 551 241 86 12 chr2 181318481 181318643 -71937940 + MLT1A2 LTR MaLR 217 390 0 213 283 17 0 chr2 181318643 181318703 -71937880 + MIR3 SINE MIR 144 204 -4 1378 199 32 97 chr2 181319104 181319472 -71937111 + L1MC5 LINE L1 7011 7335 -626 2256 113 0 3 chr2 181319472 181319782 -71936801 + AluSc SINE Alu 1 309 0 1378 199 32 97 chr2 181319782 181319947 -71936636 + L1MC5 LINE L1 7335 7509 -452 2318 304 58 46 chr2 181319948 181321888 -71934695 - ERVL LTR ERVL -578 5186 3120 2558 104 67 8 chr2 181321961 181322337 -71934246 + MLT2A1 LTR ERVL 2 399 -45 29 0 0 0 chr2 181322337 181322366 -71934217 + AT_rich Low_complexity Low_complexity 1 29 0 420 113 87 4 chr2 181322366 181322721 -71933862 + (TA)n Simple_repeat Simple_repeat 1 384 0 405 124 48 30 chr2 181322723 181323128 -71933455 + (TATAA)n Simple_repeat Simple_repeat 1 412 0 308 118 50 42 chr2 181323149 181323268 -71933315 + (TTATA)n Simple_repeat Simple_repeat 4 123 0 380 192 60 12 chr2 181323287 181323454 -71933129 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 254 189 47 47 chr2 181323475 181323644 -71932939 + (TTATA)n Simple_repeat Simple_repeat 5 173 0 328 150 67 0 chr2 181323646 181323706 -71932877 - MLT2A1 LTR ERVL -47 397 334 302 123 51 36 chr2 181323714 181323852 -71932731 + (TATAA)n Simple_repeat Simple_repeat 5 144 0 349 209 52 23 chr2 181323953 181324125 -71932458 + (TTATA)n Simple_repeat Simple_repeat 3 179 0 331 105 0 53 chr2 181324133 181324190 -71932393 + MLT2A1 LTR ERVL 400 453 0 2741 293 43 34 chr2 181324190 181325070 -71931513 - ERVL LTR ERVL -1989 3007 2120 1091 263 13 58 chr2 181325090 181325402 -71931181 - ERVL LTR ERVL -3049 1947 1650 544 324 40 0 chr2 181325536 181325712 -71930871 - ERVL LTR ERVL -4396 600 418 376 204 65 37 chr2 181325720 181325828 -71930755 - LTR16A LTR ERVL -208 242 132 1086 187 20 5 chr2 181325828 181326026 -71930557 + MLT1A1 LTR MaLR 1 201 -164 935 159 0 85 chr2 181326127 181326316 -71930267 + MER20 DNA MER1_type 46 218 -1 28 0 0 0 chr2 181327499 181327527 -71929056 + AT_rich Low_complexity Low_complexity 1 28 0 267 167 0 21 chr2 181328095 181328143 -71928440 + MER5A DNA MER1_type 10 56 -133 977 190 20 15 chr2 181328146 181328341 -71928242 + AluJb SINE Alu 106 301 -11 244 274 226 10 chr2 181328341 181328443 -71928140 + MER5A DNA MER1_type 66 189 0 584 249 52 6 chr2 181329382 181329555 -71927028 + MIR SINE MIR 82 262 0 2120 104 16 38 chr2 181331256 181331573 -71925010 - AluSg SINE Alu 0 310 1 845 108 0 89 chr2 181332862 181333019 -71923564 - L1MB8 LINE L1 -8 6170 6028 285 172 59 21 chr2 181333035 181333125 -71923458 - L1MB8 LINE L1 -141 6033 5946 228 229 33 16 chr2 181334166 181334227 -71922356 + LTR67 LTR ERVL 168 229 -328 573 248 27 20 chr2 181334325 181334474 -71922109 + LTR67 LTR ERVL 408 557 0 21 36 0 0 chr2 181335215 181335243 -71921340 + AT_rich Low_complexity Low_complexity 1 28 0 4265 192 26 14 chr2 181335452 181336253 -71920330 + MER21B LTR ERV1 42 852 -11 236 270 0 97 chr2 181336261 181336446 -71920137 - L1MC5 LINE L1 -45 7916 7750 316 180 79 34 chr2 181336517 181336606 -71919977 - L1MC5 LINE L1 -263 7698 7606 1240 171 63 56 chr2 181337435 181337722 -71918861 - AluJo SINE Alu -23 289 1 219 88 0 0 chr2 181337919 181337953 -71918630 + (TTCC)n Simple_repeat Simple_repeat 3 36 0 649 171 11 0 chr2 181338006 181338181 -71918402 + CT-rich Low_complexity Low_complexity 4 180 0 926 140 6 0 chr2 181338192 181338371 -71918212 + CT-rich Low_complexity Low_complexity 1 180 0 220 215 0 38 chr2 181338352 181338431 -71918152 + T-rich Low_complexity Low_complexity 2 77 0 * 2472 64 3 10 chr2 181338995 181339308 -71917275 - AluY SINE Alu 0 311 1 216 0 0 0 chr2 181339859 181339883 -71916700 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 294 292 80 50 chr2 181340557 181340858 -71915725 + L1MC4a LINE L1 4748 5057 -1089 489 319 93 54 chr2 181340888 181341553 -71915030 + L1MC4a LINE L1 5389 6079 -1729 1551 157 14 7 chr2 181341617 181341903 -71914680 + L1 LINE L1 5116 5403 -743 207 269 0 0 chr2 181342310 181342362 -71914221 + T-rich Low_complexity Low_complexity 4 55 0 340 314 9 19 chr2 181342549 181342654 -71913929 + MIR SINE MIR 11 114 -148 191 277 34 84 chr2 181342891 181343010 -71913573 - MIR3 SINE MIR -84 124 12 436 194 121 8 chr2 181343362 181343486 -71913097 - L1ME4a LINE L1 -9 6112 5975 273 299 11 11 chr2 181344902 181344989 -71911594 + MIR3 SINE MIR 121 207 -1 605 118 43 0 chr2 181345445 181345538 -71911045 + MER103 DNA DNA 12 108 -58 302 312 70 28 chr2 181346487 181346702 -71909881 - L2 LINE L2 -224 3048 2825 425 273 7 7 chr2 181347275 181347425 -71909158 + MER113 DNA MER1_type? 15 164 -357 2367 42 0 42 chr2 181347549 181347856 -71908727 + AluY SINE Alu 1 294 -17 412 228 0 0 chr2 181348023 181348115 -71908468 - MER53 DNA DNA -96 93 2 273 229 0 16 chr2 181348179 181348240 -71908343 + MLT1K LTR MaLR 183 242 -346 277 208 0 0 chr2 181348262 181348310 -71908273 + MER21B LTR ERV1 562 609 -254 231 222 16 48 chr2 181348549 181348612 -71907971 + MLT1K LTR MaLR 520 580 -8 228 122 0 0 chr2 181349378 181349419 -71907164 + (TTTTA)n Simple_repeat Simple_repeat 2 42 0 1221 204 84 32 chr2 181349819 181350103 -71906480 - AluJb SINE Alu -13 299 1 2143 141 0 0 chr2 181350149 181350448 -71906135 + AluSx SINE Alu 1 299 -13 780 198 64 17 chr2 181351161 181351333 -71905250 - L1PB4 LINE L1 -3 6153 5974 318 333 0 26 chr2 181351350 181351464 -71905119 + MIR SINE MIR 149 259 -3 366 80 0 0 chr2 181351529 181351579 -71905004 + (CA)n Simple_repeat Simple_repeat 1 50 0 694 278 17 6 chr2 181352740 181353092 -71903491 - FRAM SINE Alu 0 352 1 610 193 167 0 chr2 181354721 181354835 -71901748 + AluJo SINE Alu 3 135 -177 1854 147 7 3 chr2 181354835 181355298 -71901285 + AluJb SINE Alu 1 464 0 378 338 64 11 chr2 181355437 181355661 -71900922 + MIR SINE MIR 17 256 -6 184 347 111 0 chr2 181355691 181355763 -71900820 + L2 LINE L2 3142 3221 -51 1419 272 52 28 chr2 181355771 181356267 -71900316 - MLT1J LTR MaLR 0 511 4 1915 222 63 24 chr2 181356553 181357044 -71899539 - MLT1H1 LTR MaLR -45 510 1 196 273 0 0 chr2 181357045 181357089 -71899494 + L2 LINE L2 3223 3266 -6 257 305 30 46 chr2 181358984 181359115 -71897468 + MIR SINE MIR 4 132 -130 353 361 36 31 chr2 181359431 181359625 -71896958 - MIR SINE MIR -50 212 18 1498 203 134 26 chr2 181359734 181359982 -71896601 - MLT1C LTR MaLR 0 467 247 1887 162 3 16 chr2 181359982 181360297 -71896286 - AluJb SINE Alu -1 311 1 1498 203 134 26 chr2 181360297 181360467 -71896116 - MLT1C LTR MaLR -220 247 4 1075 139 61 132 chr2 181361038 181361348 -71895235 + MLT1A1 LTR MaLR 1 288 -77 752 216 0 0 chr2 181361757 181361882 -71894701 - FLAM_A SINE Alu -8 125 1 23 33 0 0 chr2 181361999 181362029 -71894554 + AT_rich Low_complexity Low_complexity 1 30 0 838 232 12 0 chr2 181362115 181362279 -71894304 - FAM SINE Alu -9 166 1 294 208 0 0 chr2 181362393 181362446 -71894137 + MER74B LTR ERVL 1 53 -569 1239 234 43 20 chr2 181362478 181362871 -71893712 + MER74B LTR ERVL 211 612 -10 2194 124 0 0 chr2 181363008 181363306 -71893277 + AluSx SINE Alu 1 298 -14 750 236 179 44 chr2 181363614 181364021 -71892562 - L2 LINE L2 0 3313 2852 1690 265 107 64 chr2 181364263 181364564 -71892019 - HAL1 LINE L1 -1 2506 2219 1290 185 113 58 chr2 181364564 181364910 -71891673 - MLT1A1 LTR MaLR 0 365 1 1690 265 107 64 chr2 181364910 181364952 -71891631 - HAL1 LINE L1 -288 2219 2180 2000 135 7 0 chr2 181364952 181365241 -71891342 + AluSx SINE Alu 3 293 -19 1690 265 107 64 chr2 181365241 181365693 -71890890 - HAL1 LINE L1 -327 2180 1652 1985 111 36 0 chr2 181365693 181365973 -71890610 - AluSg SINE Alu -20 290 1 1690 265 107 64 chr2 181365973 181366231 -71890352 - HAL1 LINE L1 -855 1652 1406 1195 162 28 19 chr2 181366446 181366662 -71889921 + MER20 DNA MER1_type 2 219 0 193 250 0 21 chr2 181366784 181366832 -71889751 - L2 LINE L2 -8 3305 3259 339 331 52 7 chr2 181367107 181367243 -71889340 + MER5A DNA MER1_type 48 189 0 824 235 91 5 chr2 181367354 181367575 -71889008 + MIR SINE MIR 7 246 -16 415 257 5 48 chr2 181367758 181367945 -71888638 + (CA)n Simple_repeat Simple_repeat 2 180 0 204 163 0 0 chr2 181367959 181368002 -71888581 + (CA)n Simple_repeat Simple_repeat 1 43 0 5922 145 15 17 chr2 181368343 181370147 -71886436 - L1PA15 LINE L1 -34 6131 4332 2434 225 77 26 chr2 181370142 181371112 -71885471 - L1ME3A LINE L1 -218 6021 4992 * 1135 162 11 35 chr2 181371122 181371388 -71885195 - AluJb SINE Alu -13 299 2 554 276 31 0 chr2 181371395 181371558 -71885025 - L1ME3A LINE L1 -1229 4986 4819 2103 270 81 14 chr2 181371560 181372696 -71883887 - L1MEc LINE L1 -3137 3078 1918 329 215 70 108 chr2 181372734 181372948 -71883635 - L1MC4 LINE L1 -1 8041 7836 2039 237 64 32 chr2 181372988 181373553 -71883030 - L1ME2 LINE L1 -10 6154 5572 875 254 61 11 chr2 181373559 181373838 -71882745 - L1ME2 LINE L1 -3500 2646 2354 590 272 98 0 chr2 181375190 181375211 -71881372 - HAL1 LINE L1 -1575 932 914 204 40 0 0 chr2 181375211 181375236 -71881347 + (TG)n Simple_repeat Simple_repeat 2 26 0 590 272 98 0 chr2 181375236 181375387 -71881196 - HAL1 LINE L1 -1593 914 743 559 234 8 0 chr2 181375387 181375511 -71881072 - MER119 DNA MER1_type -4 579 455 555 280 56 0 chr2 181375512 181375637 -71880946 - MER119 DNA MER1_type -449 134 3 211 213 43 0 chr2 181376064 181376111 -71880472 - L2 LINE L2 0 3272 3224 393 165 0 82 chr2 181376137 181376172 -71880411 - L1M1 LINE L1 -483 5822 5786 351 0 0 0 chr2 181376172 181376211 -71880372 + (TG)n Simple_repeat Simple_repeat 2 40 0 393 165 0 82 chr2 181376211 181376272 -71880311 - L1M1 LINE L1 -519 5786 5734 244 267 171 9 chr2 181376293 181376398 -71880185 - MIR SINE MIR -50 212 91 306 231 13 21 chr2 181376506 181376750 -71879833 + (TA)n Simple_repeat Simple_repeat 1 241 0 23 0 0 0 chr2 181376973 181376996 -71879587 + AT_rich Low_complexity Low_complexity 1 23 0 1842 158 0 10 chr2 181377031 181377335 -71879248 - AluJb SINE Alu -11 301 1 189 0 0 0 chr2 181377932 181377953 -71878630 + (CAAAAA)n Simple_repeat Simple_repeat 4 24 0 567 201 111 55 chr2 181378224 181378423 -71878160 + L1ME2 LINE L1 5946 6155 -9 840 192 54 27 chr2 181378683 181378907 -71877676 + L1MC5 LINE L1 7696 7925 -36 850 229 0 0 chr2 181379040 181379197 -71877386 + FRAM SINE Alu 14 170 -6 435 249 133 58 chr2 181380306 181380720 -71875863 + MER65A LTR ERV1 1 445 0 419 270 118 13 chr2 181380776 181380928 -71875655 + MIR SINE MIR 4 171 -91 392 268 249 5 chr2 181380911 181381116 -71875467 - MIR SINE MIR 0 262 8 * 279 108 0 0 chr2 181381460 181381497 -71875086 + MER21B LTR ERV1 1 37 -826 3435 164 68 36 chr2 181381528 181382222 -71874361 + MER21B LTR ERV1 145 860 -3 1153 223 67 51 chr2 181383625 181384212 -71872371 + LTR48 LTR ERV1 1 787 0 846 158 0 0 chr2 181384882 181385009 -71871574 - FLAM_C SINE Alu -6 127 1 306 293 157 37 chr2 181385174 181385365 -71871218 + MIR SINE MIR 2 215 -47 288 307 138 32 chr2 181385420 181385921 -71870662 + HAL1 LINE L1 78 631 -1876 2278 110 3 0 chr2 181386209 181386510 -71870073 + AluSc SINE Alu 1 302 -7 271 218 115 0 chr2 181386656 181386743 -71869840 + L2 LINE L2 2873 2969 -345 265 306 0 0 chr2 181386907 181386969 -71869614 + L2 LINE L2 3206 3267 -5 315 238 159 33 chr2 181387581 181387732 -71868851 - MIR3 SINE MIR -38 170 1 224 309 149 36 chr2 181387817 181388066 -71868517 - L2 LINE L2 -80 3233 2957 456 267 250 4 chr2 181388132 181388364 -71868219 - L2 LINE L2 -710 2604 2316 589 292 76 8 chr2 181388381 181388617 -71867966 + L2 LINE L2 2824 3075 -197 263 271 166 85 chr2 181389115 181389362 -71867221 + L2 LINE L2 3046 3312 -1 4701 131 86 39 chr2 181389814 181390068 -71866515 - L1MC3 LINE L1 0 7785 7544 2164 95 24 0 chr2 181390068 181390362 -71866221 - L1MA1 LINE L1 0 6302 6002 4701 131 86 39 chr2 181390362 181391028 -71865555 - L1MC3 LINE L1 -241 7544 6822 254 247 0 39 chr2 181391280 181391357 -71865226 + MIR SINE MIR 64 137 -71 1731 152 0 4 chr2 181392224 181392480 -71864103 - AluJo SINE Alu -57 255 1 387 331 0 29 chr2 181392820 181392959 -71863624 - MIR3 SINE MIR -39 169 35 360 0 0 0 chr2 181393873 181393913 -71862670 + (TG)n Simple_repeat Simple_repeat 2 41 0 189 0 0 0 chr2 181394026 181394047 -71862536 + (CCCCAG)n Simple_repeat Simple_repeat 2 22 0 239 343 104 8 chr2 181395112 181395246 -71861337 - MIR SINE MIR -66 196 50 3867 149 32 35 chr2 181395269 181395926 -71860657 + Charlie1 DNA MER1_type 2040 2696 -65 1719 124 120 4 chr2 181395926 181396192 -71860391 - AluSx SINE Alu -15 297 1 3867 149 32 35 chr2 181396192 181396257 -71860326 + Charlie1 DNA MER1_type 2696 2760 -1 573 287 39 28 chr2 181396273 181396433 -71860150 + L1M4 LINE L1 2332 2498 -3648 1751 201 18 26 chr2 181396433 181396776 -71859807 + MER2 DNA MER2_type 4 343 -1 573 287 39 28 chr2 181396776 181396869 -71859714 + L1M4 LINE L1 2498 2588 -3558 922 257 133 24 chr2 181396891 181397343 -71859240 - LTR33 LTR ERVL -20 501 1 890 268 46 37 chr2 181397403 181397840 -71858743 + L1M4 LINE L1 2653 3093 -3053 2855 123 22 2 chr2 181397844 181398259 -71858324 - MSTB LTR MaLR 0 426 4 239 206 54 11 chr2 181398269 181398361 -71858222 + L1M4 LINE L1 3132 3227 -2919 1465 171 120 18 chr2 181398389 181398663 -71857920 + AluJo SINE Alu 1 302 0 239 214 20 20 chr2 181398667 181398765 -71857818 + GA-rich Low_complexity Low_complexity 2 99 0 276 333 19 19 chr2 181401665 181401821 -71854762 + L1ME LINE L1 2460 2615 -3531 448 278 139 49 chr2 181401828 181402497 -71854086 + L1ME LINE L1 2684 3412 -2734 804 303 113 25 chr2 181402606 181403828 -71852755 + L1ME LINE L1 4329 5667 -503 536 216 61 27 chr2 181403889 181404032 -71852551 + MER39 LTR ERV1 4 142 -450 * 1069 201 82 14 chr2 181404003 181404388 -71852195 + MER39 LTR ERV1 261 704 -3 669 321 147 5 chr2 181404660 181405090 -71851493 + LTR16C LTR ERVL 1 491 0 21 0 0 0 chr2 181405382 181405403 -71851180 + AT_rich Low_complexity Low_complexity 1 21 0 200 313 0 0 chr2 181405465 181405513 -71851070 + (TATATG)n Simple_repeat Simple_repeat 2 49 0 2201 115 3 16 chr2 181405562 181405875 -71850708 - AluSx SINE Alu -3 309 1 2338 106 0 3 chr2 181407565 181407876 -71848707 - AluSx SINE Alu -2 310 1 303 28 0 0 chr2 181408062 181408098 -71848485 + (TG)n Simple_repeat Simple_repeat 2 37 0 252 0 0 0 chr2 181411208 181411236 -71845347 + (CA)n Simple_repeat Simple_repeat 1 28 0 2295 111 7 0 chr2 181411416 181411722 -71844861 + AluSx SINE Alu 1 308 -4 422 260 141 40 chr2 181412526 181412703 -71843880 + MIR SINE MIR 20 214 -48 4577 123 18 52 chr2 181412923 181413638 -71842945 + LTR8 LTR ERV1 1 691 0 616 197 21 14 chr2 181416178 181416320 -71840263 - L1MA10 LINE L1 -12 6322 6180 359 219 92 52 chr2 181416910 181417049 -71839534 + MIR SINE MIR 49 189 -28 1810 160 0 21 chr2 181417637 181417924 -71838659 + AluJo SINE Alu 1 281 -31 4509 132 125 39 chr2 181418258 181419115 -71837468 - MER21A LTR ERV1 0 931 1 235 276 9 67 chr2 181419558 181419663 -71836920 + MIR SINE MIR 96 194 -68 190 250 0 0 chr2 181419663 181419703 -71836880 - L2 LINE L2 -47 3225 3186 183 224 61 20 chr2 181419887 181419936 -71836647 - L2 LINE L2 -541 2773 2723 2356 110 125 8 chr2 181419937 181420320 -71836263 + MSTA LTR MaLR 1 428 0 1674 181 30 10 chr2 181420507 181420805 -71835778 + AluJo SINE Alu 1 304 -8 732 286 146 12 chr2 181420833 181421162 -71835421 + L2 LINE L2 2366 2738 -576 337 96 0 19 chr2 181421673 181421725 -71834858 + MADE1 DNA Mariner 30 80 0 393 216 75 22 chr2 181421728 181421862 -71834721 - MER5A DNA MER1_type -48 141 1 272 237 11 11 chr2 181422566 181422659 -71833924 + MER5A DNA MER1_type 14 106 -83 259 353 37 7 chr2 181422870 181423006 -71833577 - MIR SINE MIR -39 223 84 770 148 0 47 chr2 181423468 181423596 -71832987 - MLT1A1 LTR MaLR 0 365 244 296 220 0 0 chr2 181423698 181423757 -71832826 - L2 LINE L2 0 3272 3214 1778 79 0 0 chr2 181423773 181423989 -71832594 - AluSg/x SINE Alu -12 300 85 216 306 89 16 chr2 181424331 181424455 -71832128 - L2 LINE L2 -604 2710 2578 1949 142 29 129 chr2 181424485 181424688 -71831895 + Charlie4a DNA MER1_type 43 265 -1696 2105 109 36 13 chr2 181424688 181424990 -71831593 + AluSx SINE Alu 1 309 -3 1949 142 29 129 chr2 181424990 181425318 -71831265 + Charlie4a DNA MER1_type 265 508 0 329 296 62 85 chr2 181427141 181427529 -71829054 - MLT1K LTR MaLR -42 546 168 2222 116 7 0 chr2 181428321 181428624 -71827959 + AluSx SINE Alu 1 305 -7 2415 88 0 22 chr2 181428726 181429044 -71827539 + AluY SINE Alu 1 311 0 650 185 15 8 chr2 181429097 181429227 -71827356 + FLAM_C SINE Alu 2 132 -1 659 259 86 86 chr2 181429960 181430239 -71826344 - MER34 LTR ERV1 -6 536 258 2017 142 0 0 chr2 181430239 181430521 -71826062 + AluSx SINE Alu 1 282 -30 450 0 0 0 chr2 181430526 181430576 -71826007 + (TAGA)n Simple_repeat Simple_repeat 4 53 0 659 259 86 86 chr2 181430576 181430826 -71825757 - MER34 LTR ERV1 -287 255 1 520 224 42 21 chr2 181431613 181431756 -71824827 - MIR SINE MIR -28 234 89 2297 122 11 75 chr2 181432176 181432237 -71824346 - L1MA6 LINE L1 0 6300 6237 2426 75 0 7 chr2 181432237 181432542 -71824041 - AluY SINE Alu 0 311 9 2297 122 11 75 chr2 181432542 181432931 -71823652 - L1MA6 LINE L1 -63 6237 5879 415 253 185 0 chr2 181433023 181433169 -71823414 + MER5A DNA MER1_type 14 186 -3 345 229 38 38 chr2 181433485 181433590 -71822993 - L2 LINE L2 -21 3292 3188 269 216 72 63 chr2 181436106 181436217 -71820366 - MLT1L LTR MaLR -6 609 498 258 81 0 0 chr2 181436286 181436323 -71820260 + (TC)n Simple_repeat Simple_repeat 1 37 0 229 296 112 48 chr2 181436323 181436529 -71820054 - MLT1K LTR MaLR -158 430 212 309 254 15 0 chr2 181436610 181436677 -71819906 + MIR SINE MIR 83 150 -58 225 191 85 43 chr2 181437960 181438054 -71818529 + L2 LINE L2 3216 3313 0 246 284 11 23 chr2 181440269 181440357 -71816226 - MER5A DNA MER1_type -56 133 47 821 203 79 11 chr2 181440383 181440560 -71816023 + MER5A DNA MER1_type 1 189 0 832 200 6 6 chr2 181440707 181440882 -71815701 + MER5B DNA MER1_type 4 178 0 180 176 0 0 chr2 181441351 181441385 -71815198 + GA-rich Low_complexity Low_complexity 1 34 0 836 151 7 20 chr2 181443669 181443815 -71812768 + FAM SINE Alu 1 41 -8 2073 142 0 0 chr2 181445052 181445341 -71811242 + AluSx SINE Alu 1 289 -23 301 324 81 6 chr2 181445400 181445573 -71811010 - MIR SINE MIR -41 221 36 2316 87 0 32 chr2 181447536 181447846 -71808737 - AluSg SINE Alu -10 300 1 1011 301 71 26 chr2 181448013 181448395 -71808188 + MLT1K LTR MaLR 23 421 -167 4383 225 158 28 chr2 181448395 181449806 -71806777 + L1MD3 LINE L1 6397 7990 -5 390 292 130 0 chr2 181450767 181450928 -71805655 + MER91A DNA MER1_type 1 182 -14 2184 123 73 3 chr2 181451056 181451396 -71805187 + THE1B LTR MaLR 1 364 0 10639 99 16 63 chr2 181451396 181453053 -71803530 + THE1B-int LTR MaLR 1 1580 0 2572 118 3 3 chr2 181453053 181453417 -71803166 + THE1B LTR MaLR 1 364 0 192 302 10 52 chr2 181454411 181454507 -71802076 - L2 LINE L2 -1 3271 3180 1605 119 0 169 chr2 181456554 181456914 -71799669 - AluJo SINE Alu -3 299 1 636 122 0 0 chr2 181457226 181457316 -71799267 + FRAM SINE Alu 62 151 -25 577 174 18 9 chr2 181457612 181457721 -71798862 - ORSL DNA AcHobo -1 274 165 3035 173 30 40 chr2 181457721 181457810 -71798773 + L1MB5 LINE L1 5622 5710 -590 2219 117 68 34 chr2 181457810 181458162 -71798421 - THE1B LTR MaLR 0 364 1 3035 173 30 40 chr2 181458162 181458793 -71797790 + L1MB5 LINE L1 5710 6294 -6 574 133 114 0 chr2 181458861 181458966 -71797617 - ORSL DNA AcHobo -157 118 2 1117 321 100 29 chr2 181459128 181460077 -71796506 - L2 LINE L2 -554 2760 1744 2058 112 45 0 chr2 181460859 181461145 -71795438 + AluY SINE Alu 1 299 -12 180 250 62 0 chr2 181461731 181461779 -71794804 + L2 LINE L2 3222 3272 0 214 238 143 65 chr2 181461834 181462002 -71794581 + MIR SINE MIR 25 205 -57 829 288 101 29 chr2 181462022 181462654 -71793929 + L1ME4a LINE L1 4072 4749 -1397 524 259 124 50 chr2 181462674 181463208 -71793375 + L1P4 LINE L1 4881 5461 -705 2024 116 48 0 chr2 181463287 181463579 -71793004 - AluSx SINE Alu -6 306 1 860 293 67 7 chr2 181463919 181464352 -71792231 + L1ME4a LINE L1 5495 5953 -217 742 301 17 21 chr2 181464805 181465041 -71791542 - MIR SINE MIR -27 235 1 1810 154 37 17 chr2 181465520 181465895 -71790688 - MER1B DNA MER1_type 0 339 2 374 267 137 19 chr2 181466902 181467063 -71789520 - MIR SINE MIR -35 227 48 1632 193 30 3 chr2 181467307 181467608 -71788975 + AluJb SINE Alu 1 309 -3 180 0 0 0 chr2 181517829 181517849 -71738734 + (A)n Simple_repeat Simple_repeat 1 20 0 2393 101 0 0 chr2 181518065 181518371 -71738212 + AluSx SINE Alu 4 309 -3 440 174 22 11 chr2 181518694 181518786 -71737797 - L1MD3 LINE L1 -1 7994 7902 517 206 39 0 chr2 181518798 181518900 -71737683 - MER81 DNA DNA -8 106 1 1154 202 32 12 chr2 181518901 181519148 -71737435 - L1MD3 LINE L1 -100 7895 7644 241 247 39 13 chr2 181519148 181519225 -71737358 - Tigger7 DNA MER2_type 0 2487 2409 450 53 0 0 chr2 181519691 181519748 -71736835 + (CATA)n Simple_repeat Simple_repeat 2 58 0 1883 114 18 14 chr2 181521023 181521303 -71735280 + AluJb SINE Alu 6 286 -26 614 191 90 73 chr2 181521409 181521587 -71734996 + MIR SINE MIR 17 197 -65 205 259 35 0 chr2 181521807 181521865 -71734718 + L2 LINE L2 3211 3270 -2 307 311 22 7 chr2 181522097 181522232 -71734351 + L1ME4a LINE L1 5966 6102 -19 1775 153 41 3 chr2 181522641 181522936 -71733647 - AluJo SINE Alu -6 306 1 24 32 0 0 chr2 181522952 181522983 -71733600 + AT_rich Low_complexity Low_complexity 1 31 0 330 300 185 0 chr2 181523143 181523273 -71733310 - L2 LINE L2 -2 3270 3117 812 112 0 0 chr2 181524156 181524263 -71732320 - AluSp SINE Alu -201 112 6 2423 79 13 0 chr2 181524267 181524572 -71732011 - AluSq SINE Alu -4 309 1 236 305 195 20 chr2 181524660 181524962 -71731621 - L2 LINE L2 -1209 2105 1751 352 159 250 61 chr2 181525072 181525204 -71731379 + MER5B DNA MER1_type 22 178 0 180 281 200 19 chr2 181525217 181525377 -71731206 - L2 LINE L2 -1767 1547 1359 22 0 0 0 chr2 181525522 181525544 -71731039 + AT_rich Low_complexity Low_complexity 1 22 0 322 221 59 0 chr2 181526728 181526796 -71729787 - L2 LINE L2 0 3313 3242 577 286 38 11 chr2 181526919 181527104 -71729479 + MIR SINE MIR 8 197 -65 784 136 72 8 chr2 181528298 181528423 -71728160 + FLAM_C SINE Alu 1 133 0 2255 108 0 3 chr2 181528517 181528813 -71727770 - AluSq SINE Alu -18 295 1 2196 170 17 8 chr2 181528946 181529304 -71727279 - MLT1C LTR MaLR 0 467 107 3756 126 133 14 chr2 181529304 181529360 -71727223 + Tigger2 DNA MER2_type 1 49 -2669 2283 111 0 3 chr2 181529360 181529667 -71726916 - AluSg SINE Alu -4 306 1 3756 126 133 14 chr2 181529667 181530270 -71726313 + Tigger2 DNA MER2_type 49 739 -1979 704 269 156 3 chr2 181530597 181530879 -71725704 + MER102a DNA MER1_type 2 326 -4 266 225 217 8 chr2 181530945 181531065 -71725518 + L2 LINE L2 3165 3309 -4 264 190 86 103 chr2 181531248 181531364 -71725219 - MER103 DNA DNA -46 120 7 197 223 10 39 chr2 181532439 181532542 -71724041 + GA-rich Low_complexity Low_complexity 1 100 0 238 333 0 9 chr2 181532548 181532662 -71723921 + G-rich Low_complexity Low_complexity 5 117 0 6388 126 16 18 chr2 181533138 181534139 -71722444 + L1MC1 LINE L1 5319 6317 -16 1998 117 0 0 chr2 181534142 181534406 -71722177 + AluSx SINE Alu 1 264 -48 869 247 42 46 chr2 181534419 181534702 -71721881 + L1M1 LINE L1 1595 1876 -5689 324 246 156 18 chr2 181534771 181534995 -71721588 - MLT1K LTR MaLR -6 582 328 355 250 115 27 chr2 181535118 181535266 -71721317 + L2 LINE L2 2555 2715 -599 835 196 88 5 chr2 181535266 181535460 -71721123 + L1PA16 LINE L1 5957 6166 0 954 243 107 50 chr2 181535463 181535799 -71720784 + L2 LINE L2 2710 3111 -202 735 169 39 15 chr2 181535799 181535929 -71720654 + AluJo SINE Alu 1 133 -169 954 243 107 50 chr2 181535929 181536145 -71720438 + L2 LINE L2 3111 3313 0 290 225 28 0 chr2 181536446 181536517 -71720066 + Tigger2 DNA MER2_type 672 744 -1974 962 231 80 0 chr2 181536584 181536822 -71719761 + Tigger2 DNA MER2_type 2462 2718 0 808 102 0 0 chr2 181536822 181536930 -71719653 - MLT1C LTR MaLR -359 108 1 380 158 95 32 chr2 181538262 181538357 -71718226 - MER112 DNA MER1_type -6 254 154 979 307 82 45 chr2 181538605 181539205 -71717378 + L1ME4a LINE L1 5483 6104 -17 374 215 50 50 chr2 181540163 181540284 -71716299 + MIR SINE MIR 70 190 -72 1424 80 5 5 chr2 181541812 181541999 -71714584 + AluSg SINE Alu 6 192 -118 2991 109 31 55 chr2 181542154 181542677 -71713906 + L1MA8 LINE L1 5782 6291 0 22 0 0 0 chr2 181542719 181542741 -71713842 + AT_rich Low_complexity Low_complexity 1 22 0 2255 90 3 0 chr2 181542848 181543137 -71713446 - AluSg SINE Alu -11 299 10 533 275 53 24 chr2 181543156 181543365 -71713218 + L1ME LINE L1 4453 4672 -1474 297 0 0 0 chr2 181543365 181543398 -71713185 + (CAA)n Simple_repeat Simple_repeat 2 34 0 533 275 53 24 chr2 181543398 181543435 -71713148 + L1ME LINE L1 4672 4706 -1440 823 221 0 18 chr2 181543437 181543600 -71712983 + AluJo SINE Alu 137 296 -16 1262 49 67 12 chr2 181543667 181543831 -71712752 - L1PA11 LINE L1 -2 6172 6000 23 0 0 0 chr2 181544119 181544142 -71712441 + AT_rich Low_complexity Low_complexity 1 23 0 441 278 113 28 chr2 181544580 181544828 -71711755 + L1ME LINE L1 5288 5556 -565 1226 166 0 0 chr2 181544840 181545050 -71711533 + AluJb SINE Alu 117 484 -35 897 186 45 6 chr2 181545050 181545206 -71711377 + FAM SINE Alu 1 162 -13 1226 166 0 0 chr2 181545206 181545243 -71711340 + AluJb SINE Alu 483 519 0 383 131 71 24 chr2 181545250 181545334 -71711249 + L1MC3 LINE L1 7347 7434 -351 1960 195 29 34 chr2 181545338 181545632 -71710951 + Tigger7 DNA MER2_type 1 294 -439 2085 97 3 45 chr2 181545632 181545942 -71710641 - AluSc SINE Alu -12 297 1 1960 195 29 34 chr2 181545942 181546057 -71710526 + Tigger7 DNA MER2_type 294 408 -325 2335 122 157 0 chr2 181546695 181547065 -71709518 + MSTA LTR MaLR 1 428 0 234 170 0 21 chr2 181548185 181548232 -71708351 + MIR3 SINE MIR 157 202 -6 414 239 174 30 chr2 181548981 181549148 -71707435 - L2 LINE L2 -21 3292 3102 296 323 11 0 chr2 181549178 181549271 -71707312 - L2 LINE L2 -297 3016 2923 669 153 4 6 chr2 181549855 181550118 -71706465 - AluJb SINE Alu -5 307 1 2261 162 73 15 chr2 181550971 181551474 -71705109 - Tigger7 DNA MER2_type 0 2487 2 2366 91 3 7 chr2 181551596 181551905 -71704678 - AluSc SINE Alu -1 308 1 282 216 11 57 chr2 181552087 181552175 -71704408 + MER112 DNA MER1_type 1 84 -176 21 71 0 0 chr2 181552492 181552534 -71704049 + AT_rich Low_complexity Low_complexity 1 42 0 867 203 0 0 chr2 181553309 181553496 -71703087 + FRAM SINE Alu 1 187 0 805 188 80 11 chr2 181553626 181553802 -71702781 + AluJo SINE Alu 123 310 -2 306 217 348 0 chr2 181553802 181553894 -71702689 + MER5A DNA MER1_type 66 189 0 2069 139 0 0 chr2 181554199 181554500 -71702083 + AluJb SINE Alu 1 301 -11 275 308 35 63 chr2 181555000 181555143 -71701440 + MLT1L LTR MaLR 131 269 -346 262 271 42 0 chr2 181555248 181555344 -71701239 + MLT1L LTR MaLR 422 521 -94 465 199 72 88 chr2 181555524 181555705 -71700878 + L2 LINE L2 3134 3311 -2 268 288 37 28 chr2 181555717 181555834 -71700749 + MIR SINE MIR 58 186 -22 190 264 139 78 chr2 181556129 181556184 -71700399 + L2 LINE L2 3002 3052 -261 1858 106 53 50 chr2 181556184 181556487 -71700096 + AluSx SINE Alu 1 304 -8 190 264 139 78 chr2 181556487 181556560 -71700023 + L2 LINE L2 3052 3138 -175 896 98 0 0 chr2 181556615 181556737 -71699846 + AluSp/q SINE Alu 191 312 -1 254 325 42 25 chr2 181557286 181557406 -71699177 + MIR3 SINE MIR 78 199 -9 283 301 229 6 chr2 181557638 181557804 -71698779 - MIR SINE MIR -12 250 48 420 294 106 52 chr2 181557959 181558368 -71698215 - MLT1J2 LTR MaLR -41 466 13 751 143 109 0 chr2 181558955 181559074 -71697509 - FLAM_C SINE Alu -10 133 2 911 219 41 32 chr2 181559436 181559682 -71696901 - MIR SINE MIR 0 262 15 1903 129 0 60 chr2 181560592 181560909 -71695674 - AluJb SINE Alu -14 298 1 289 279 0 18 chr2 181564321 181564432 -71692151 + (TA)n Simple_repeat Simple_repeat 2 110 0 452 236 106 8 chr2 181569116 181569239 -71687344 + MIR SINE MIR 49 183 -79 22 0 0 0 chr2 181569365 181569387 -71687196 + AT_rich Low_complexity Low_complexity 1 22 0 2138 148 15 6 chr2 181571471 181571803 -71684780 + MER1B DNA MER1_type 2 336 -1 1592 144 34 52 chr2 181572496 181572787 -71683796 - AluJo SINE Alu -17 295 10 2530 172 143 135 chr2 181572829 181573343 -71683240 - L1MD3 LINE L1 -52 7943 7435 777 136 8 1 chr2 181573343 181573473 -71683110 - MLT1F1 LTR MaLR -444 123 1 2530 172 143 135 chr2 181573473 181573983 -71682600 - L1MD3 LINE L1 -560 7435 6781 588 213 131 22 chr2 181574111 181574294 -71682289 + MIR SINE MIR 59 261 -1 601 176 263 68 chr2 181574329 181574534 -71682049 + MIR SINE MIR 18 262 0 2098 113 3 0 chr2 181574568 181574851 -71681732 - AluSx SINE Alu -28 284 1 1741 152 53 20 chr2 181575546 181575848 -71680735 - AluJo SINE Alu 0 312 1 405 341 141 13 chr2 181576510 181576894 -71679689 - L2 LINE L2 -649 2665 2233 1848 132 22 0 chr2 181576928 181577201 -71679382 + AluSx SINE Alu 20 298 -14 2053 188 27 20 chr2 181577295 181577736 -71678847 - L1MB5 LINE L1 0 6174 5731 443 193 7 87 chr2 181577746 181577896 -71678687 - L1MA4 LINE L1 -5 6295 6158 26 0 0 0 chr2 181578443 181578469 -71678114 + AT_rich Low_complexity Low_complexity 1 26 0 898 281 56 30 chr2 181578551 181578853 -71677730 - L2 LINE L2 0 3313 3004 1635 176 70 0 chr2 181579729 181580002 -71676581 + AluJb SINE Alu 1 292 -20 276 230 91 21 chr2 181580797 181580899 -71675684 - MIR3 SINE MIR -97 111 14 205 205 0 0 chr2 181581330 181581369 -71675214 - L2 LINE L2 -2 3311 3273 1699 158 91 0 chr2 181582657 181582942 -71673641 - AluJb SINE Alu -1 311 1 282 233 116 23 chr2 181583756 181583842 -71672741 + MIR SINE MIR 86 179 -83 1163 221 3 3 chr2 181584043 181584333 -71672250 + L1M4 LINE L1 4908 5197 -949 2507 43 3 46 chr2 181584751 181585076 -71671507 - AluY SINE Alu 0 311 1 307 313 102 17 chr2 181585118 181585294 -71671289 - MIR SINE MIR -6 256 66 2170 110 0 14 chr2 181585877 181586169 -71670414 + AluSq SINE Alu 1 288 -25 1734 194 44 21 chr2 181586245 181586631 -71669952 - MSTD LTR MaLR -1 395 1 607 312 21 21 chr2 181586731 181586920 -71669663 - MIR SINE MIR -73 189 1 270 81 0 0 chr2 181587508 181587545 -71669038 + (TATATG)n Simple_repeat Simple_repeat 2 38 0 450 250 92 33 chr2 181587561 181587713 -71668870 - MIR SINE MIR -2 260 100 198 266 127 25 chr2 181587949 181588028 -71668555 + MIR SINE MIR 118 204 -58 725 191 0 15 chr2 181588240 181588371 -71668212 + FLAM_C SINE Alu 1 129 -4 1769 181 0 7 chr2 181588375 181588668 -71667915 + AluJo SINE Alu 1 291 -21 1632 123 0 156 chr2 181588670 181589028 -71667555 + AluSx SINE Alu 1 302 0 1723 111 52 0 chr2 181589029 181589299 -71667284 + L1PA14 LINE L1 5869 6152 -9 21 57 0 0 chr2 181589715 181589750 -71666833 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr2 181590651 181590679 -71665904 + AT_rich Low_complexity Low_complexity 1 28 0 28 48 0 0 chr2 181593108 181593150 -71663433 + AT_rich Low_complexity Low_complexity 1 42 0 426 293 83 6 chr2 181593243 181593424 -71663159 - L2 LINE L2 -910 2404 2210 1985 94 0 40 chr2 181593461 181593736 -71662847 - AluSx SINE Alu -48 264 1 304 309 49 49 chr2 181593737 181593899 -71662684 - MER5B DNA MER1_type -10 168 7 1275 282 196 29 chr2 181594227 181594393 -71662190 - L2 LINE L2 -1158 2156 2019 1562 183 35 7 chr2 181594393 181594682 -71661901 - AluJb SINE Alu -14 298 2 1275 282 196 29 chr2 181594682 181595380 -71661203 - L2 LINE L2 -1295 2019 1147 1673 134 29 14 chr2 181595533 181595809 -71660774 + MER1B DNA MER1_type 60 339 0 1214 218 31 19 chr2 181595839 181596100 -71660483 + AluJo SINE Alu 1 264 -48 34 42 0 0 chr2 181596156 181596204 -71660379 + AT_rich Low_complexity Low_complexity 1 48 0 2258 110 0 3 chr2 181596226 181596527 -71660056 - AluSx SINE Alu -12 300 1 250 304 22 36 chr2 181596551 181596689 -71659894 - L1MC/D LINE L1 -2089 5719 5584 196 361 148 9 chr2 181596808 181596916 -71659667 - L2 LINE L2 -10 3262 3140 1037 164 27 45 chr2 181596919 181597139 -71659444 - MER20 DNA MER1_type -3 216 1 2213 95 0 7 chr2 181597526 181597811 -71658772 - AluSq SINE Alu -7 306 24 338 215 159 0 chr2 181598107 181598214 -71658369 + L1MC5 LINE L1 7703 7826 -135 21 0 0 0 chr2 181598418 181598439 -71658144 + AT_rich Low_complexity Low_complexity 1 21 0 297 190 0 0 chr2 181599286 181599344 -71657239 - MER103 DNA DNA -63 103 46 187 293 0 0 chr2 181599570 181599611 -71656972 - L2 LINE L2 -557 2757 2717 1970 134 37 7 chr2 181599690 181599988 -71656595 + AluSx SINE Alu 1 307 -5 587 133 91 49 chr2 181601002 181601145 -71655438 - Charlie1 DNA MER1_type -2611 150 2 234 119 48 0 chr2 181601160 181601202 -71655381 + L1MC5 LINE L1 7740 7783 -178 1979 133 3 3 chr2 181601207 181601493 -71655090 + AluSx SINE Alu 2 287 -25 293 250 36 36 chr2 181601509 181601649 -71654934 + L1MC5 LINE L1 7773 7912 -49 696 183 24 16 chr2 181601677 181601803 -71654780 - FLAM_A SINE Alu -5 128 2 426 247 113 41 chr2 181601942 181602083 -71654500 - L1MEd LINE L1 -868 1622 1493 1683 163 23 23 chr2 181602083 181602384 -71654199 - AluJb SINE Alu -11 301 1 426 247 113 41 chr2 181602384 181602712 -71653871 - L1MEd LINE L1 -997 1493 1020 1017 213 35 13 chr2 181603576 181603806 -71652777 + Tigger7 DNA MER2_type 11 245 -2242 556 126 19 19 chr2 181603799 181603902 -71652681 + Tigger7 DNA MER2_type 2384 2486 -1 * 208 254 0 0 chr2 181604721 181604776 -71651807 + A-rich Low_complexity Low_complexity 1 55 0 200 281 37 89 chr2 181604968 181605103 -71651480 - L3 LINE CR1 -268 1309 1182 1495 199 77 7 chr2 181605759 181606046 -71650537 + AluJo SINE Alu 1 307 -5 4640 187 84 53 chr2 181606634 181607718 -71648865 - Charlie1a DNA MER1_type -1314 1447 308 3515 163 74 7 chr2 181607718 181608435 -71648148 + L1MB7 LINE L1 5415 6179 -5 4640 187 84 53 chr2 181608435 181608753 -71647830 - Charlie1a DNA MER1_type -2453 308 1 324 25 0 0 chr2 181608771 181608811 -71647772 + AluJb SINE Alu 9 48 -254 1844 117 0 81 chr2 181608835 181609157 -71647426 + AluSx SINE Alu 11 308 0 509 275 7 14 chr2 181609894 181610036 -71646547 - MIR3 SINE MIR -2 206 66 39 47 0 35 chr2 181614295 181614381 -71642202 + GC_rich Low_complexity Low_complexity 1 83 0 234 0 0 0 chr2 181614594 181614620 -71641963 + (TCC)n Simple_repeat Simple_repeat 3 28 0 21 82 0 0 chr2 181614663 181614712 -71641871 + GC_rich Low_complexity Low_complexity 1 49 0 23 33 0 0 chr2 181614787 181614817 -71641766 + GC_rich Low_complexity Low_complexity 1 30 0 310 154 26 0 chr2 181614858 181614936 -71641647 + GA-rich Low_complexity Low_complexity 1 80 0 249 83 0 0 chr2 181615044 181615080 -71641503 + (CCG)n Simple_repeat Simple_repeat 3 38 0 204 178 44 0 chr2 181615148 181615193 -71641390 + G-rich Low_complexity Low_complexity 2 48 0 21 0 0 0 chr2 181616653 181616674 -71639909 + AT_rich Low_complexity Low_complexity 1 21 0 267 189 38 0 chr2 181616755 181616808 -71639775 + L2 LINE L2 3254 3308 -5 1788 121 6 84 chr2 181617193 181617525 -71639058 + AluSx SINE Alu 5 310 -2 1573 161 8 0 chr2 181617677 181617926 -71638657 + AluJb SINE Alu 47 297 -15 2353 90 0 19 chr2 181618432 181618743 -71637840 + AluY SINE Alu 1 305 -6 1229 181 73 4 chr2 181619169 181619428 -71637155 + L1MD3 LINE L1 7719 7995 0 1965 127 35 0 chr2 181622326 181622609 -71633974 + AluSx SINE Alu 1 293 -19 1594 98 16 120 chr2 181622663 181622980 -71633603 + L1MA4A LINE L1 6006 6289 -14 1720 103 0 4 chr2 181623192 181623424 -71633159 - AluSg SINE Alu -66 244 14 360 230 0 0 chr2 181623966 181624040 -71632543 + MER116 DNA Mariner 7 80 0 184 222 28 0 chr2 181624623 181624695 -71631888 + (TA)n Simple_repeat Simple_repeat 1 74 0 841 196 60 20 chr2 181625693 181625892 -71630691 + MER3 DNA MER1_type 1 207 -2 227 270 44 38 chr2 181625986 181626033 -71630550 + L2 LINE L2 2230 2275 -1039 2178 120 0 10 chr2 181626033 181626334 -71630249 - AluSq SINE Alu -15 298 1 227 270 44 38 chr2 181626334 181626445 -71630138 + L2 LINE L2 2275 2389 -925 2102 79 19 73 chr2 181626700 181627017 -71629566 + AluY SINE Alu 1 300 -11 1402 175 48 37 chr2 181627021 181627290 -71629293 + AluJb SINE Alu 1 272 -40 1444 147 139 19 chr2 181627717 181627983 -71628600 + AluJb SINE Alu 1 298 -4 2010 111 7 7 chr2 181628674 181628953 -71627630 + AluSx SINE Alu 9 287 -25 516 161 9 36 chr2 181628959 181629071 -71627512 + L1MC3 LINE L1 7677 7785 0 415 234 211 33 chr2 181629434 181629771 -71626812 + LTR33 LTR ERVL 112 508 -13 284 237 0 53 chr2 181629806 181629882 -71626701 + L2 LINE L2 3169 3240 -73 389 230 183 16 chr2 181629941 181630067 -71626516 + MER3 DNA MER1_type 46 192 -17 808 273 65 19 chr2 181632430 181632797 -71623786 + L1MC5 LINE L1 7508 7891 -70 2215 94 7 10 chr2 181632797 181633094 -71623489 - AluSx SINE Alu -16 296 1 331 135 0 0 chr2 181633154 181633206 -71623377 + MER66A LTR ERV1 287 338 -140 216 0 0 0 chr2 181634062 181634086 -71622497 + (T)n Simple_repeat Simple_repeat 1 24 0 680 326 84 9 chr2 181634345 181634765 -71621818 - Tigger8 DNA MER2_type -128 538 8 476 217 9 9 chr2 181634775 181634881 -71621702 + L2 LINE L2 3186 3291 -22 235 217 0 0 chr2 181635870 181635916 -71620667 + (TG)n Simple_repeat Simple_repeat 1 46 0 530 261 51 82 chr2 181636719 181637109 -71619474 - L2 LINE L2 -1 3312 2935 201 297 0 0 chr2 181637633 181637703 -71618880 + MIR SINE MIR 49 119 -89 607 251 115 6 chr2 181637810 181637993 -71618590 - L1ME3A LINE L1 -25 6145 5943 226 327 0 18 chr2 181638002 181638112 -71618471 - L1ME3A LINE L1 -689 5432 5325 1344 231 78 0 chr2 181638266 181638560 -71618023 + Tigger7 DNA MER2_type 2 318 -2169 1121 164 11 0 chr2 181638556 181638739 -71617844 + Tigger7 DNA MER2_type 2398 2582 -5 * 380 311 176 40 chr2 181640048 181640428 -71616155 - L2 LINE L2 -5 3308 2877 2373 100 0 0 chr2 181640998 181641308 -71615275 + AluSg SINE Alu 1 310 0 294 283 18 9 chr2 181641464 181641577 -71615006 - MIR SINE MIR -65 143 30 1723 152 13 44 chr2 181642463 181642778 -71613805 + AluJo SINE Alu 1 305 -7 2456 243 95 62 chr2 181643013 181643757 -71612826 + L1MC4a LINE L1 5268 5986 -1822 2802 80 11 11 chr2 181643757 181644131 -71612452 - THE1C LTR MaLR -1 374 1 2456 243 95 62 chr2 181644131 181644244 -71612339 + L1MC4a LINE L1 5986 6094 -1714 2239 116 7 0 chr2 181644244 181644538 -71612045 - AluSx SINE Alu -16 296 1 2456 243 95 62 chr2 181644538 181644706 -71611877 + L1MC4a LINE L1 6094 6328 -1480 226 69 0 0 chr2 181644868 181644897 -71611686 - LTR6A LTR ERV1 -463 101 73 2252 104 10 0 chr2 181645819 181646126 -71610457 + AluSp SINE Alu 1 310 -3 258 226 0 0 chr2 181646138 181646200 -71610383 + L1MC4a LINE L1 6407 6468 -1340 1673 244 98 11 chr2 181646221 181646692 -71609891 + L1MC4a LINE L1 6432 6943 -865 793 229 79 20 chr2 181646727 181646969 -71609614 - MLT1F1 LTR MaLR -300 267 14 943 233 138 84 chr2 181646978 181647267 -71609316 + L1MC4 LINE L1 7361 7633 -409 2274 109 0 10 chr2 181647267 181647570 -71609013 + AluSq SINE Alu 4 303 -10 943 233 138 84 chr2 181647570 181647924 -71608659 + L1MC4 LINE L1 7633 8039 -3 351 78 0 20 chr2 181648024 181648075 -71608508 - L1M2 LINE L1 -792 5499 5450 1854 169 14 7 chr2 181649763 181650053 -71606530 - AluJo SINE Alu -20 292 1 1703 136 65 65 chr2 181650237 181650545 -71606038 - AluSx SINE Alu -4 308 1 350 250 91 15 chr2 181652156 181652288 -71604295 - MIR3 SINE MIR -49 159 18 225 284 82 52 chr2 181652961 181653095 -71603488 + MIR SINE MIR 75 212 -50 2161 96 64 0 chr2 181653245 181653525 -71603058 - AluSx SINE Alu -14 298 1 22 0 0 0 chr2 181654097 181654119 -71602464 + AT_rich Low_complexity Low_complexity 1 22 0 1064 162 0 0 chr2 181654332 181654499 -71602084 + FRAM SINE Alu 1 40 0 233 191 0 21 chr2 181654891 181654938 -71601645 + (CA)n Simple_repeat Simple_repeat 1 46 0 369 162 50 30 chr2 181655845 181655944 -71600639 + MER5B DNA MER1_type 78 178 0 1658 163 46 0 chr2 181656412 181656694 -71599889 + AluJo SINE Alu 1 295 -17 21 0 0 0 chr2 181657833 181657854 -71598729 + AT_rich Low_complexity Low_complexity 1 21 0 214 262 95 0 chr2 181658378 181658462 -71598121 + MIR SINE MIR 51 142 -66 2197 92 20 3 chr2 181658524 181658819 -71597764 + AluSq SINE Alu 1 300 -13 187 271 0 0 chr2 181659220 181659268 -71597315 + MIR SINE MIR 82 129 -79 2045 125 14 3 chr2 181659551 181659838 -71596745 + AluJb SINE Alu 1 290 -22 1509 163 38 31 chr2 181660335 181660457 -71596126 + AluJo SINE Alu 1 121 -191 198 0 0 0 chr2 181660457 181660479 -71596104 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 1509 163 38 31 chr2 181660479 181660644 -71595939 + AluJo SINE Alu 121 290 -22 186 118 0 0 chr2 181660644 181660678 -71595905 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 1601 251 32 5 chr2 181661383 181661822 -71594761 + L1MB7 LINE L1 4416 4866 -1280 * 4602 140 34 58 chr2 181661811 181662719 -71593864 - L1MB2 LINE L1 -1 6170 5285 922 167 22 66 chr2 181662720 181663245 -71593338 + L1MB7 LINE L1 4840 5499 -685 * 2085 163 58 0 chr2 181663226 181663606 -71592977 + L1MB7 LINE L1 5766 6167 -17 395 284 62 19 chr2 181663726 181663888 -71592695 + MIR SINE MIR 20 188 -74 2304 90 0 19 chr2 181664043 181664355 -71592228 + AluSg SINE Alu 1 306 -4 960 115 49 3 chr2 181664689 181664915 -71591668 + AluSx SINE Alu 2 304 -5 587 276 7 0 chr2 181665832 181665977 -71590606 + MIR SINE MIR 117 262 0 2460 87 0 0 chr2 181666311 181666620 -71589963 - AluSc SINE Alu 0 309 1 194 268 99 0 chr2 181666992 181667063 -71589520 - L3b LINE CR1 -242 1341 1264 270 181 117 53 chr2 181667096 181667190 -71589393 + L1ME LINE L1 5405 5504 -617 342 339 0 35 chr2 181667375 181667490 -71589093 - L2 LINE L2 0 3272 3162 1453 171 12 16 chr2 181667579 181667831 -71588752 - AluJo SINE Alu -20 292 42 630 211 50 25 chr2 181667848 181668009 -71588574 - L1ME2 LINE L1 -9 6155 5991 1879 229 61 28 chr2 181668029 181668774 -71587809 - L1ME2 LINE L1 -347 5817 5046 733 221 104 0 chr2 181669294 181669457 -71587126 + MER5A DNA MER1_type 7 186 -3 202 280 100 0 chr2 181669953 181670003 -71586580 - MIR SINE MIR -188 74 20 530 239 38 19 chr2 181670151 181670310 -71586273 - L2 LINE L2 -1544 1770 1609 991 207 118 26 chr2 181670406 181670676 -71585907 + MER58B DNA MER1_type 44 338 -3 565 321 29 36 chr2 181670813 181671093 -71585490 - L2 LINE L2 -5 3308 3031 25 0 0 0 chr2 181671918 181671943 -71584640 + AT_rich Low_complexity Low_complexity 1 25 0 217 269 0 0 chr2 181673514 181673566 -71583017 + (TA)n Simple_repeat Simple_repeat 1 52 0 211 346 10 0 chr2 181673515 181673616 -71582967 + (CATATA)n Simple_repeat Simple_repeat 2 103 0 * 318 26 0 0 chr2 181674021 181674060 -71582523 + (CA)n Simple_repeat Simple_repeat 2 40 0 26 0 0 0 chr2 181674113 181674139 -71582444 + AT_rich Low_complexity Low_complexity 1 26 0 21 57 0 0 chr2 181679630 181679665 -71576918 + AT_rich Low_complexity Low_complexity 1 35 0 484 267 60 7 chr2 181680682 181680832 -71575751 + MIR SINE MIR 98 255 -7 368 250 24 36 chr2 181681245 181681329 -71575254 - MIR SINE MIR -159 103 21 21 0 0 0 chr2 181682007 181682028 -71574555 + AT_rich Low_complexity Low_complexity 1 21 0 262 291 23 0 chr2 181682096 181682182 -71574401 + L1MC4a LINE L1 4723 4810 -1336 1839 144 13 35 chr2 181682190 181682503 -71574080 + AluJo SINE Alu 1 306 -6 23 0 0 0 chr2 181682504 181682527 -71574056 + AT_rich Low_complexity Low_complexity 1 23 0 1850 136 46 7 chr2 181682527 181682648 -71573935 + AluSq SINE Alu 1 116 -197 180 0 0 0 chr2 181682648 181682668 -71573915 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 1850 136 46 7 chr2 181682668 181682853 -71573730 + AluSq SINE Alu 116 313 0 389 314 31 13 chr2 181682854 181683013 -71573570 + L1MC4a LINE L1 5739 5900 -1908 677 272 80 31 chr2 181683018 181683242 -71573341 + MIR SINE MIR 15 249 -13 2415 53 0 0 chr2 181683256 181683586 -71572997 + AluY SINE Alu 1 330 0 21 0 0 0 chr2 181683633 181683654 -71572929 + AT_rich Low_complexity Low_complexity 1 21 0 2386 239 102 3 chr2 181685094 181685866 -71570717 - L1ME3A LINE L1 -21 6149 5281 11733 35 5 1 chr2 181685966 181687413 -71569170 - L1P LINE L1 -1470 4676 3225 1811 95 32 11 chr2 181687513 181687797 -71568786 + AluY SINE Alu 4 293 -18 592 323 47 33 chr2 181687799 181688158 -71568425 + L1ME4a LINE L1 5548 5911 -210 453 266 47 8 chr2 181688183 181688311 -71568272 + MIR SINE MIR 57 189 -73 254 360 44 7 chr2 181689335 181689471 -71567112 - Tigger8 DNA MER2_type -500 166 26 717 220 0 0 chr2 181689636 181689768 -71566815 + FLAM_A SINE Alu 1 132 -1 2903 118 11 9 chr2 181690033 181690490 -71566093 + L1MC1 LINE L1 5867 6324 -9 2069 125 7 0 chr2 181690491 181690779 -71565804 - AluSg1 SINE Alu -19 290 1 1918 166 3 7 chr2 181690803 181691111 -71565472 + AluJb SINE Alu 1 307 -5 27 29 0 0 chr2 181691163 181691197 -71565386 + AT_rich Low_complexity Low_complexity 1 34 0 1629 246 87 68 chr2 181691908 181692760 -71563823 + L1MC4a LINE L1 5266 6133 -1675 403 263 119 25 chr2 181692838 181692998 -71563585 - MIR SINE MIR -56 206 32 24 53 0 0 chr2 181693012 181693050 -71563533 + AT_rich Low_complexity Low_complexity 1 38 0 936 75 0 0 chr2 181693353 181693473 -71563110 + AluY SINE Alu 192 311 0 1236 118 47 28 chr2 181693482 181693737 -71562846 + L1MA8 LINE L1 6015 6274 -17 1729 157 3 52 chr2 181693937 181694261 -71562322 - AluJo SINE Alu -4 308 1 676 260 59 4 chr2 181694452 181694706 -71561877 - L1MEc LINE L1 -4122 2274 2007 917 127 0 8 chr2 181694706 181694840 -71561743 - MER46A DNA MER2_type -5 231 99 347 90 82 0 chr2 181695049 181695171 -71561412 + (TA)n Simple_repeat Simple_repeat 2 133 0 269 255 94 9 chr2 181695210 181695316 -71561267 - L2 LINE L2 -84 3229 3115 2069 129 0 10 chr2 181695485 181695796 -71560787 - AluJb SINE Alu -4 308 1 1418 158 0 110 chr2 181696018 181696353 -71560230 - AluJo SINE Alu -14 298 1 729 284 125 57 chr2 181696501 181696973 -71559610 - MLT1L LTR MaLR -65 550 47 285 295 98 0 chr2 181697417 181697539 -71559044 - MLT1I LTR MaLR 0 409 276 421 213 90 33 chr2 181697612 181697734 -71558849 - MLT1I LTR MaLR -279 130 2 253 226 0 0 chr2 181697795 181697848 -71558735 - Tigger4(Zombi) DNA MER2_type 0 2731 2679 579 192 10 0 chr2 181699378 181699482 -71557101 - MER8 DNA MER2_type -1 238 134 541 254 0 49 chr2 181700542 181700684 -71555899 + FLAM_A SINE Alu 2 136 -6 827 243 95 33 chr2 181701584 181701827 -71554756 + MIR SINE MIR 3 260 -2 893 169 11 49 chr2 181701865 181702048 -71554535 - MER20 DNA MER1_type 0 219 44 2349 101 0 0 chr2 181702274 181702580 -71554003 - AluSq SINE Alu -7 306 1 30 59 0 0 chr2 181705895 181705946 -71550637 + AT_rich Low_complexity Low_complexity 1 51 0 1004 180 0 18 chr2 181707393 181707560 -71549023 + FRAM SINE Alu 1 159 -17 345 131 0 0 chr2 181707561 181707622 -71548961 + (CA)n Simple_repeat Simple_repeat 2 62 0 233 318 91 27 chr2 181707750 181707860 -71548723 - L2 LINE L2 -20 3252 3136 985 171 39 84 chr2 181708311 181708621 -71547962 + L1MC5 LINE L1 6727 7022 -939 254 324 128 10 chr2 181709134 181709236 -71547347 + MIR SINE MIR 1 114 -148 1363 165 0 60 chr2 181709254 181709520 -71547063 - AluJo SINE Alu -36 276 27 268 298 58 8 chr2 181709520 181709641 -71546942 + MIR SINE MIR 123 249 -13 4103 139 28 36 chr2 181709837 181710586 -71545997 + Tigger2 DNA MER2_type 2 744 -1974 1098 137 124 64 chr2 181710647 181710880 -71545703 + Tigger2 DNA MER2_type 2472 2718 0 880 158 0 0 chr2 181711360 181711493 -71545090 - FLAM_C SINE Alu 0 133 1 1468 95 11 0 chr2 181711692 181711881 -71544702 - AluSg/x SINE Alu -15 297 107 889 221 12 0 chr2 181712064 181712236 -71544347 - FAM SINE Alu -1 174 1 1562 187 20 17 chr2 181712888 181713182 -71543401 - AluJo SINE Alu -15 297 3 881 119 8 15 chr2 181713223 181713357 -71543226 + FLAM_C SINE Alu 1 133 0 1663 178 37 7 chr2 181713486 181713784 -71542799 - AluSx SINE Alu -5 307 1 2053 138 0 0 chr2 181713912 181714210 -71542373 + AluSx SINE Alu 1 298 -14 386 377 73 25 chr2 181714256 181714654 -71541929 + L2 LINE L2 2806 3222 -50 21 36 0 0 chr2 181714828 181714856 -71541727 + AT_rich Low_complexity Low_complexity 1 28 0 284 211 105 26 chr2 181715156 181715270 -71541313 + MER104 DNA Tc2 1 123 -57 380 323 0 19 chr2 181715729 181715890 -71540693 + L2 LINE L2 2338 2495 -819 416 114 71 0 chr2 181716123 181716193 -71540390 + MADE1 DNA Mariner 4 78 -2 402 200 111 22 chr2 181716260 181716395 -71540188 - MER5C DNA MER1_type -128 196 50 1245 259 33 35 chr2 181716972 181717427 -71539156 - L1MEc LINE L1 -4653 2469 2016 2321 113 0 3 chr2 181717427 181717737 -71538846 - AluSx SINE Alu -3 309 1 826 284 114 65 chr2 181717738 181718281 -71538302 - L1MEc LINE L1 -5021 1402 833 769 113 53 8 chr2 181721392 181721525 -71535058 + MER85 DNA T2_type 1 139 0 2233 98 7 3 chr2 181722312 181722608 -71533975 - AluSc SINE Alu -12 297 1 3922 174 63 139 chr2 181722782 181722845 -71533738 + Charlie1a DNA MER1_type 1 67 -2694 1970 150 0 3 chr2 181722845 181723132 -71533451 + AluSx SINE Alu 1 286 -26 3922 174 63 139 chr2 181723132 181724346 -71532237 + Charlie1a DNA MER1_type 67 1180 -275 357 111 79 0 chr2 181725891 181725954 -71530629 - Tigger4(Zombi) DNA MER2_type -79 2652 2585 1795 151 0 46 chr2 181725954 181726091 -71530492 + AluJo SINE Alu 1 143 -169 2529 67 0 13 chr2 181726091 181726406 -71530177 + AluY SINE Alu 1 311 0 1795 151 0 46 chr2 181726406 181726572 -71530011 + AluJo SINE Alu 143 290 -22 675 138 49 0 chr2 181726576 181726699 -71529884 + L1MA5 LINE L1 6153 6281 -19 2234 110 0 3 chr2 181726701 181726991 -71529592 - AluSx SINE Alu -23 289 1 2211 117 7 0 chr2 181727122 181727430 -71529153 - AluSq SINE Alu -3 310 1 681 156 43 28 chr2 181728079 181728220 -71528363 - FLAM_C SINE Alu 0 143 1 432 264 57 14 chr2 181728310 181728450 -71528133 - MER103 DNA DNA 0 166 21 2418 86 0 0 chr2 181728725 181729028 -71527555 + AluSc SINE Alu 1 303 -6 289 301 49 16 chr2 181729469 181729592 -71526991 - MIR SINE MIR -17 245 119 270 0 0 0 chr2 181729621 181729651 -71526932 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 2121 93 4 4 chr2 181729654 181729932 -71526651 - AluSx SINE Alu -34 278 1 628 135 0 0 chr2 181730102 181730198 -71526385 + L1MB3 LINE L1 5447 5542 -791 234 0 0 0 chr2 181730940 181730966 -71525617 + (CA)n Simple_repeat Simple_repeat 2 27 0 204 40 0 0 chr2 181730965 181730990 -71525593 + (TC)n Simple_repeat Simple_repeat 1 25 0 * 263 143 0 198 chr2 181731502 181731593 -71524990 + MER33 DNA MER1_type 5 77 -247 619 96 90 90 chr2 181731597 181731753 -71524830 + MER33 DNA MER1_type 208 363 0 6041 98 36 3 chr2 181731817 181732734 -71523849 - Tigger3b DNA MER2_type 0 1231 285 510 106 12 0 chr2 181733628 181733713 -71522870 + L1MB3 LINE L1 6091 6176 -7 2190 120 0 0 chr2 181733810 181734111 -71522472 + AluSx SINE Alu 1 301 -11 2268 101 7 0 chr2 181734527 181734824 -71521759 + AluSx SINE Alu 1 299 -13 329 233 37 43 chr2 181734920 181735058 -71521525 + L1ME1 LINE L1 6014 6142 -24 4050 153 10 46 chr2 181735156 181735774 -71520809 + Tigger2 DNA MER2_type 1 587 -2131 1902 143 6 25 chr2 181735774 181736088 -71520495 + AluJo SINE Alu 1 308 -4 4050 153 10 46 chr2 181736088 181736248 -71520335 + Tigger2 DNA MER2_type 587 751 -1967 1741 142 11 4 chr2 181736748 181737022 -71519561 + AluJb SINE Alu 22 297 -15 25 0 0 0 chr2 181737347 181737372 -71519211 + AT_rich Low_complexity Low_complexity 1 25 0 2221 89 0 7 chr2 181737372 181737665 -71518918 + AluSq SINE Alu 2 292 -21 579 51 0 0 chr2 181737665 181737744 -71518839 + (TA)n Simple_repeat Simple_repeat 1 79 0 2191 119 65 6 chr2 181737870 181738224 -71518359 + THE1C LTR MaLR 1 375 0 302 304 73 73 chr2 181738765 181739147 -71517436 + MLT1K LTR MaLR 191 572 -16 201 138 0 0 chr2 181739377 181739406 -71517177 - MIR SINE MIR -160 102 74 2060 107 10 13 chr2 181739803 181740102 -71516481 + AluSx SINE Alu 1 298 -14 2164 109 3 0 chr2 181741259 181741543 -71515040 + AluSq SINE Alu 3 287 -26 1733 244 106 64 chr2 181741886 181742715 -71513868 + L1ME LINE L1 36 829 -5241 450 0 0 0 chr2 181742715 181742765 -71513818 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 1733 244 106 64 chr2 181742765 181742923 -71513660 + L1ME LINE L1 829 973 -5097 2088 99 46 3 chr2 181742923 181743206 -71513377 - AluSg SINE Alu -15 295 1 1733 244 106 64 chr2 181743206 181743310 -71513273 + L1ME LINE L1 973 1071 -4999 4705 187 8 33 chr2 181743597 181744858 -71511725 - L1MA10 LINE L1 -83 6251 5019 3548 162 12 41 chr2 181744927 181745434 -71511149 + L1 LINE L1 4118 4597 -1549 2135 124 3 0 chr2 181745434 181745733 -71510850 + AluSx SINE Alu 1 300 -12 3548 162 12 41 chr2 181745733 181745983 -71510600 + L1 LINE L1 4597 4853 -1293 816 184 0 0 chr2 181746075 181746216 -71510367 + L1 LINE L1 4854 4994 -1152 1745 151 39 18 chr2 181746558 181746720 -71509863 - AluSx SINE Alu -21 291 119 405 0 0 0 chr2 181746720 181746765 -71509818 + (TG)n Simple_repeat Simple_repeat 2 46 0 1745 151 39 18 chr2 181746765 181746887 -71509696 - AluSx SINE Alu -193 119 1 26561 47 3 0 chr2 181746909 181751013 -71505570 - L1PA5 LINE L1 -8 6146 2033 1727 188 0 3 chr2 181751417 181751705 -71504878 + AluJb SINE Alu 5 291 -21 909 145 0 7 chr2 181752134 181752279 -71504304 + AluSg/x SINE Alu 155 298 -14 241 269 15 15 chr2 181752460 181752527 -71504056 + L1MC4 LINE L1 6712 6778 -1264 3684 159 31 43 chr2 181752538 181753006 -71503577 + MER44D DNA MER2_type 9 481 -2106 2463 61 0 26 chr2 181753006 181753316 -71503267 - AluY SINE Alu -7 304 3 3684 159 31 43 chr2 181753316 181753421 -71503162 + MER44D DNA MER2_type 481 586 -2001 660 89 0 20 chr2 181753421 181753522 -71503061 - HY3 scRNA scRNA -2 99 1 3684 159 31 43 chr2 181753522 181753652 -71502931 + MER44D DNA MER2_type 586 705 0 431 236 123 119 chr2 181753665 181753886 -71502697 + L1MC4 LINE L1 6753 7080 -962 2119 142 46 3 chr2 181753942 181754288 -71502295 - MLT1B LTR MaLR -16 374 14 394 234 170 48 chr2 181754313 181754419 -71502164 + L1MC5 LINE L1 7010 7102 -859 2133 123 7 0 chr2 181754419 181754727 -71501856 + AluSx SINE Alu 1 310 -2 394 234 170 48 chr2 181754727 181754808 -71501775 + L1MC5 LINE L1 7102 7220 -741 1362 182 44 43 chr2 181754879 181755243 -71501340 - MLT2B1 LTR ERVL -52 362 1 1001 139 28 0 chr2 181755252 181755432 -71501151 - L1MB7 LINE L1 -320 5864 5680 211 217 0 0 chr2 181755482 181755528 -71501055 + T-rich Low_complexity Low_complexity 1 46 0 271 354 54 48 chr2 181756856 181757189 -71499394 + L2 LINE L2 2549 2883 -431 2106 125 38 46 chr2 181757248 181757641 -71498942 + MLT1B LTR MaLR 1 390 0 17101 33 0 1 chr2 181758006 181760094 -71496489 + L1P LINE L1 1158 3244 -2902 209 346 96 0 chr2 181763454 181763558 -71493025 + L2 LINE L2 3147 3260 -12 23 54 0 0 chr2 181763960 181763997 -71492586 + AT_rich Low_complexity Low_complexity 1 37 0 248 148 111 19 chr2 181764662 181764716 -71491867 + L1ME LINE L1 5592 5650 -471 870 253 79 79 chr2 181764952 181765418 -71491165 - L2 LINE L2 -1394 1920 1455 665 249 98 62 chr2 181765430 181765755 -71490828 + L2 LINE L2 2912 3248 -65 249 299 196 0 chr2 181765759 181765866 -71490717 - L2 LINE L2 -1851 1463 1336 270 327 106 0 chr2 181765869 181765982 -71490601 + L1MC/D LINE L1 5723 5847 -1961 2422 77 0 7 chr2 181766012 181766322 -71490261 + AluSp SINE Alu 1 308 -5 459 232 112 0 chr2 181767469 181767594 -71488989 + MIR SINE MIR 112 250 -12 2819 196 54 16 chr2 181767934 181768560 -71488023 + L1MD3 LINE L1 7344 7993 -2 281 344 56 76 chr2 181768744 181769090 -71487493 - MLT1J2 LTR MaLR -33 417 79 180 0 0 0 chr2 181769090 181769110 -71487473 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 281 344 56 76 chr2 181769110 181769173 -71487410 - MLT1J2 LTR MaLR -371 79 16 2023 143 10 7 chr2 181769412 181769712 -71486871 + AluSx SINE Alu 1 301 -11 331 292 75 36 chr2 181769751 181770032 -71486551 + L1M4 LINE L1 4368 4659 -1487 15548 122 54 6 chr2 181770090 181772134 -71484449 + Tigger4(Zombi) DNA MER2_type 2 2200 -531 237 33 0 0 chr2 181772134 181772164 -71484419 + (TAA)n Simple_repeat Simple_repeat 1 30 0 15548 122 54 6 chr2 181772164 181772718 -71483865 + Tigger4(Zombi) DNA MER2_type 2200 2726 -5 196 263 10 101 chr2 181773054 181773153 -71483430 - L2 LINE L2 -242 3030 2941 1577 197 7 13 chr2 181773908 181774207 -71482376 + AluJo SINE Alu 1 297 -15 2195 104 17 3 chr2 181775653 181775952 -71480631 - AluSx SINE Alu -9 303 1 1690 178 65 41 chr2 181777595 181778012 -71478571 - MSTC LTR MaLR 0 428 2 552 311 134 45 chr2 181778659 181779174 -71477409 - L2 LINE L2 -1139 2175 1615 1992 127 3 10 chr2 181779663 181779971 -71476612 - AluSx SINE Alu -6 306 1 1540 151 23 0 chr2 181780001 181780259 -71476324 + AluSx SINE Alu 44 307 -5 326 280 42 17 chr2 181780275 181780393 -71476190 - HAL1b LINE L1 0 1348 1228 332 249 104 70 chr2 181780407 181780608 -71475975 - HAL1b LINE L1 -186 1162 955 2411 75 3 3 chr2 181780625 181780931 -71475652 - AluSp SINE Alu -7 306 1 461 339 76 30 chr2 181781315 181781749 -71474834 + L2 LINE L2 1942 2395 -919 336 315 103 60 chr2 181781749 181782133 -71474450 + L2 LINE L2 2684 3090 -223 598 204 211 4 chr2 181782317 181782582 -71474001 + MER113 DNA MER1_type? 104 423 -98 388 333 67 7 chr2 181782906 181783056 -71473527 - MIR SINE MIR -30 232 74 279 0 0 0 chr2 181783093 181783124 -71473459 + (TA)n Simple_repeat Simple_repeat 1 31 0 1746 157 75 0 chr2 181783124 181783405 -71473178 - AluJb SINE Alu -10 302 1 1538 184 25 14 chr2 181783977 181784254 -71472329 - AluJo SINE Alu -32 280 1 2305 110 3 0 chr2 181786422 181786723 -71469860 + AluSx SINE Alu 1 302 -10 23 0 0 0 chr2 181786723 181786746 -71469837 + AT_rich Low_complexity Low_complexity 1 23 0 305 321 12 0 chr2 181786808 181786892 -71469691 - LTR16C LTR ERVL -242 249 165 2060 116 0 7 chr2 181787007 181787299 -71469284 + AluSx SINE Alu 22 311 -1 2317 107 0 0 chr2 181787761 181788069 -71468514 - AluSg SINE Alu -2 308 1 1217 207 148 18 chr2 181788172 181788558 -71468025 - MLT1C LTR MaLR 0 467 32 3808 130 20 40 chr2 181788943 181789634 -71466949 + Tigger1 DNA MER2_type 1 677 -1741 180 0 0 0 chr2 181789639 181789659 -71466924 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 696 205 0 0 chr2 181789661 181789773 -71466810 - FLAM_A SINE Alu -30 112 1 10451 111 25 12 chr2 181789773 181790679 -71465904 + Tigger1 DNA MER2_type 664 1602 -816 2208 108 3 16 chr2 181790679 181790984 -71465599 + AluSg SINE Alu 1 301 -9 10451 111 25 12 chr2 181790984 181791768 -71464815 + Tigger1 DNA MER2_type 1602 2375 -43 316 150 167 0 chr2 181791778 181791838 -71464745 + Tigger1 DNA MER2_type 2345 2414 -4 195 324 232 33 chr2 181791991 181792383 -71464200 + L2 LINE L2 2388 2857 -457 2352 82 3 0 chr2 181792470 181792774 -71463809 - AluY SINE Alu -6 305 1 823 147 19 0 chr2 181792844 181793000 -71463583 - L1MB4 LINE L1 0 6180 6022 238 160 0 0 chr2 181793002 181793052 -71463531 + L1MC4 LINE L1 7993 8042 0 911 134 70 0 chr2 181793184 181793356 -71463227 + L1MA6 LINE L1 6117 6300 0 1609 167 47 30 chr2 181793397 181793862 -71462721 + L1MB5 LINE L1 5577 6146 -28 282 192 55 0 chr2 181793880 181793953 -71462630 + L1M4 LINE L1 2176 2252 -3894 262 125 250 0 chr2 181793953 181794009 -71462574 - Tigger5 DNA MER2_type 0 2323 2254 1696 160 57 0 chr2 181794009 181794290 -71462293 + AluSx SINE Alu 1 297 -15 254 233 0 81 chr2 181794374 181794460 -71462123 - Tigger5 DNA MER2_type 0 2323 2245 1143 234 83 31 chr2 181794460 181795012 -71461571 + L1M4 LINE L1 2263 2843 -3303 778 256 4 40 chr2 181795696 181795923 -71460660 - MIR SINE MIR -5 257 39 207 0 0 0 chr2 181795956 181795979 -71460604 + (A)n Simple_repeat Simple_repeat 1 23 0 768 172 0 30 chr2 181796680 181796814 -71459769 + FLAM_A SINE Alu 1 130 -3 2309 161 14 32 chr2 181797173 181797461 -71459122 + MSTB LTR MaLR 1 280 -146 2254 93 7 0 chr2 181797461 181797750 -71458833 + AluSp SINE Alu 3 293 -20 2309 161 14 32 chr2 181797750 181797895 -71458688 + MSTB LTR MaLR 280 426 0 399 302 62 45 chr2 181797900 181798086 -71458497 + MIR3 SINE MIR 1 203 -5 2726 7 0 16 chr2 181798102 181798412 -71458171 + AluYa5 SINE Alu 1 305 -6 2188 104 9 25 chr2 181798670 181798988 -71457595 - AluSp SINE Alu 0 313 1 1766 163 3 24 chr2 181799024 181799312 -71457271 + AluJo SINE Alu 30 311 -1 711 174 0 36 chr2 181799312 181799450 -71457133 + FLAM_C SINE Alu 1 133 0 691 233 99 51 chr2 181799460 181799713 -71456870 + L1MC4 LINE L1 7627 7891 -151 307 161 65 32 chr2 181799716 181799809 -71456774 + L1MD3 LINE L1 7900 7995 0 * 778 181 155 15 chr2 181799806 181800077 -71456506 + L1MC4 LINE L1 6936 7244 -798 897 315 23 20 chr2 181800080 181800426 -71456157 - L2 LINE L2 -757 2557 2211 271 284 35 17 chr2 181800629 181800745 -71455838 + L1ME4a LINE L1 5975 6092 -29 358 199 103 14 chr2 181800786 181800940 -71455643 - HAL1b LINE L1 -3 6118 1189 2208 100 7 0 chr2 181801073 181801363 -71455220 - AluSg SINE Alu -18 292 1 210 133 0 44 chr2 181802373 181802418 -71454165 + (TAAAAA)n Simple_repeat Simple_repeat 2 44 0 1317 203 137 34 chr2 181802479 181802923 -71453660 + L1MC5 LINE L1 6973 7462 -499 348 243 76 19 chr2 181804594 181804735 -71451848 + L1MD3 LINE L1 6632 6734 -1261 4229 132 31 54 chr2 181804751 181805571 -71451012 + L1MB2 LINE L1 5338 6138 -33 2075 126 3 3 chr2 181805571 181805864 -71450719 - AluSx SINE Alu -19 293 1 4229 132 31 54 chr2 181805864 181805891 -71450692 + L1MB2 LINE L1 6138 6164 -7 954 148 55 32 chr2 181805905 181806122 -71450461 + L1MD3 LINE L1 7603 7824 -171 345 85 0 158 chr2 181806132 181806214 -71450369 + Tigger2 DNA MER2_type 1 69 -2649 * 2621 137 23 2 chr2 181806204 181806641 -71449942 + Tigger2 DNA MER2_type 2273 2718 0 1819 184 0 10 chr2 181806644 181806953 -71449630 - AluJb SINE Alu -6 306 1 2050 154 0 0 chr2 181807066 181807371 -71449212 + AluSx SINE Alu 1 305 -7 2066 281 53 24 chr2 181807628 181808692 -71447891 + L1M4 LINE L1 1430 2524 -5222 7046 115 54 10 chr2 181808754 181809657 -71446926 - Tigger3b DNA MER2_type -1797 1231 262 1631 176 10 23 chr2 181809657 181809963 -71446620 + AluJo SINE Alu 1 302 -10 7046 115 54 10 chr2 181809963 181810238 -71446345 - Tigger3b DNA MER2_type -2766 262 1 279 199 60 0 chr2 181810258 181810355 -71446228 + L1M4 LINE L1 2835 2919 -4646 * 1149 175 86 10 chr2 181810351 181810403 -71446180 + L1M4 LINE L1 6794 6841 -762 2138 129 10 3 chr2 181810403 181810712 -71445871 + AluSx SINE Alu 1 311 -1 1149 175 86 10 chr2 181810712 181810951 -71445632 + L1M4 LINE L1 6841 7107 -496 2731 202 93 61 chr2 181811022 181811786 -71444797 + L1MC4a LINE L1 6790 7595 -213 1801 156 3 51 chr2 181811786 181812100 -71444483 + AluJo SINE Alu 1 299 -13 2731 202 93 61 chr2 181812100 181812320 -71444263 + L1MC4a LINE L1 7595 7806 -2 1568 157 19 101 chr2 181812334 181812652 -71443931 - 7SLRNA srpRNA srpRNA -28 292 1 316 229 156 0 chr2 181812677 181812773 -71443810 + L1M4 LINE L1 5192 5302 -844 517 245 114 58 chr2 181813094 181813563 -71443020 + MLT1H LTR MaLR 1 549 0 870 262 120 49 chr2 181813777 181813824 -71442759 + MLT1J LTR MaLR 13 55 -456 2241 113 0 0 chr2 181813824 181814125 -71442458 - AluSx SINE Alu -11 301 1 870 262 120 49 chr2 181814125 181814339 -71442244 + MLT1J LTR MaLR 55 252 -259 1886 157 0 48 chr2 181814339 181814690 -71441893 - MER1B DNA MER1_type 0 337 4 870 262 120 49 chr2 181814690 181814893 -71441690 + MLT1J LTR MaLR 252 511 0 1228 182 63 39 chr2 181815119 181815188 -71441395 + AluJb SINE Alu 2 68 -244 1673 102 0 0 chr2 181815188 181815413 -71441170 - AluSg/x SINE Alu -2 310 86 1228 182 63 39 chr2 181815413 181815629 -71440954 + AluJb SINE Alu 68 294 -18 388 313 18 49 chr2 181815738 181815901 -71440682 - L2 LINE L2 -10 3303 3146 295 260 0 13 chr2 181815882 181815959 -71440624 + MIR SINE MIR 183 258 -4 * 272 147 118 29 chr2 181816334 181816402 -71440181 + LTR67 LTR ERVL 484 557 0 392 179 32 11 chr2 181816432 181816530 -71440053 + L1ME1 LINE L1 6066 6172 -8 295 234 161 6 chr2 181816652 181816819 -71439764 + MER2 DNA MER2_type 3 143 -202 2062 109 0 26 chr2 181816819 181817121 -71439462 - AluSx SINE Alu -18 294 1 295 234 161 6 chr2 181817121 181817198 -71439385 + MER2 DNA MER2_type 143 344 -1 2201 112 0 0 chr2 181817801 181818095 -71438488 + AluSx SINE Alu 1 294 -18 2446 100 0 0 chr2 181818207 181818517 -71438066 + AluSx SINE Alu 1 310 -2 1588 118 14 64 chr2 181819263 181819583 -71437000 + AluSx SINE Alu 1 305 0 215 132 26 0 chr2 181820828 181820866 -71435717 + (CCCCG)n Simple_repeat Simple_repeat 5 43 0 641 272 80 42 chr2 181821398 181821611 -71434972 + MIR SINE MIR 12 232 -30 374 264 57 9 chr2 181821851 181821957 -71434626 - MIR SINE MIR -115 147 37 1671 176 7 3 chr2 181821967 181822256 -71434327 + AluJb SINE Alu 23 312 0 2376 90 0 0 chr2 181822299 181822589 -71433994 - AluSg SINE Alu -18 292 3 2309 55 42 3 chr2 181823047 181823336 -71433247 + AluY SINE Alu 2 301 -10 2129 135 0 0 chr2 181823344 181823640 -71432943 + AluSx SINE Alu 1 296 -16 2367 77 3 19 chr2 181824262 181824573 -71432010 + AluSp SINE Alu 8 313 0 202 343 45 0 chr2 181825451 181825518 -71431065 - L2 LINE L2 -21 3251 3182 2328 79 0 0 chr2 181825523 181825839 -71430744 + AluY SINE Alu 1 316 0 407 61 99 0 chr2 181825839 181825970 -71430613 + (TA)n Simple_repeat Simple_repeat 2 145 0 2117 185 22 16 chr2 181826830 181827204 -71429379 - L1M4 LINE L1 -494 5690 5319 2275 104 3 7 chr2 181827204 181827503 -71429080 + AluSp SINE Alu 1 298 -15 2117 185 22 16 chr2 181827503 181827891 -71428692 - L1M4 LINE L1 -865 5319 4921 1359 97 11 0 chr2 181827910 181828095 -71428488 - AluY SINE Alu -6 305 119 2541 77 0 3 chr2 181830480 181830792 -71425791 - AluSq SINE Alu -2 311 1 1874 205 72 8 chr2 181830854 181831245 -71425338 + MLT1F1 LTR MaLR 1 416 -151 225 300 157 22 chr2 181831453 181831676 -71424907 + L2 LINE L2 1448 1700 -1614 273 29 0 0 chr2 181831956 181831990 -71424593 + (TA)n Simple_repeat Simple_repeat 2 35 0 1489 189 60 11 chr2 181832022 181832303 -71424280 + AluJo SINE Alu 1 295 -17 872 142 0 0 chr2 181832451 181832571 -71424012 + AluJb SINE Alu 1 120 -192 441 83 36 0 chr2 181832571 181832655 -71423928 + (CA)n Simple_repeat Simple_repeat 1 87 0 1080 139 6 23 chr2 181832657 181832830 -71423753 + AluJb SINE Alu 132 301 -11 2268 121 0 0 chr2 181832906 181832932 -71423651 - AluSx SINE Alu -6 306 281 234 0 0 0 chr2 181832932 181832958 -71423625 + (TG)n Simple_repeat Simple_repeat 1 26 0 2268 121 0 0 chr2 181832958 181833237 -71423346 - AluSx SINE Alu -30 282 1 1862 196 66 47 chr2 181833309 181833884 -71422699 + L1M4 LINE L1 4367 4952 -1194 232 224 53 26 chr2 181833879 181833955 -71422628 + L1MA10 LINE L1 6244 6321 -13 * 2050 124 0 3 chr2 181833959 181834271 -71422312 + AluSx SINE Alu 2 312 0 1896 85 0 0 chr2 181834519 181834754 -71421829 + AluY SINE Alu 65 299 -12 961 189 6 0 chr2 181834925 181835094 -71421489 - FRAM SINE Alu -6 170 1 2401 141 22 36 chr2 181835267 181835713 -71420870 + L1MB4 LINE L1 5741 6180 0 366 293 116 0 chr2 181835727 181835908 -71420675 + MIR SINE MIR 61 262 0 1280 162 203 0 chr2 181836053 181836294 -71420289 - AluJo SINE Alu -12 290 1 2023 106 64 0 chr2 181836459 181836742 -71419841 - AluSx SINE Alu -11 301 1 571 99 0 0 chr2 181836922 181837003 -71419580 - Alu SINE Alu -5 305 225 1235 50 0 13 chr2 181837558 181837717 -71418866 + L1PA4 LINE L1 5996 6152 -3 2396 115 0 0 chr2 181838315 181838627 -71417956 + AluSx SINE Alu 1 312 0 270 338 38 4 chr2 181838936 181839152 -71417431 - L2 LINE L2 -286 3027 2725 1224 103 0 0 chr2 181839429 181839604 -71416979 - AluY SINE Alu -1 310 136 1064 206 46 0 chr2 181839617 181839855 -71416728 - MER33 DNA MER1_type -75 249 1 448 269 39 13 chr2 181840065 181840221 -71416362 - L2 LINE L2 -784 2530 2371 2702 175 11 54 chr2 181840265 181840297 -71416286 + L1M4 LINE L1 4720 4752 -1394 2200 125 0 0 chr2 181840297 181840594 -71415989 + AluSx SINE Alu 1 297 -15 2219 108 3 32 chr2 181840594 181840908 -71415675 + AluSp SINE Alu 1 305 -8 2702 175 11 54 chr2 181840908 181841501 -71415082 + L1M4 LINE L1 4750 5319 -827 349 286 95 73 chr2 181841512 181841793 -71414790 - L2 LINE L2 -974 2340 2046 2204 135 0 0 chr2 181841793 181842105 -71414478 + AluSx SINE Alu 1 312 0 349 286 95 73 chr2 181842105 181842222 -71414361 - L2 LINE L2 -1268 2046 1933 2332 86 0 0 chr2 181842241 181842544 -71414039 + AluSx SINE Alu 5 307 -5 468 153 10 34 chr2 181842559 181842759 -71413824 + AluJo SINE Alu 31 311 -1 546 265 204 33 chr2 181842788 181842882 -71413701 - L2 LINE L2 -1508 1806 1729 354 45 0 0 chr2 181842882 181842926 -71413657 + (TTGG)n Simple_repeat Simple_repeat 1 44 0 546 265 204 33 chr2 181842926 181843257 -71413326 - L2 LINE L2 -1585 1729 1308 414 282 36 56 chr2 181844416 181844611 -71411972 + MLT1L LTR MaLR 120 310 -305 771 173 49 25 chr2 181844613 181844775 -71411808 - FRAM SINE Alu 0 166 1 320 283 17 33 chr2 181844938 181845058 -71411525 + MLT1L LTR MaLR 487 604 -11 22 35 0 0 chr2 181845280 181845309 -71411274 + AT_rich Low_complexity Low_complexity 1 29 0 1806 153 3 20 chr2 181845370 181845664 -71410919 - AluJo SINE Alu -23 289 1 1724 155 42 3 chr2 181846584 181846868 -71409715 - AluJo SINE Alu -15 297 3 1383 231 19 21 chr2 181847026 181847399 -71409184 - MER74B LTR ERVL -58 564 193 310 157 48 72 chr2 181847430 181847513 -71409070 - MER74B LTR ERVL -541 81 1 1307 248 90 84 chr2 181847683 181848228 -71408355 + MER77 LTR ERV1 54 601 -4 199 323 21 0 chr2 181848644 181848737 -71407846 + MIR SINE MIR 168 262 0 509 261 149 5 chr2 181848742 181848937 -71407646 - L1MC/D LINE L1 -2034 5774 5552 2057 150 0 0 chr2 181848938 181849231 -71407352 + AluSx SINE Alu 1 293 -19 354 208 1 11 chr2 181849269 181849356 -71407227 - L1ME1 LINE L1 -1 6163 6080 1747 186 3 38 chr2 181849389 181849707 -71406876 - AluJb SINE Alu -5 307 1 1892 150 0 11 chr2 181850427 181850738 -71405845 + AluJb SINE Alu 1 308 0 2223 116 0 0 chr2 181850879 181851171 -71405412 - AluSq SINE Alu -21 292 1 698 143 0 129 chr2 181851939 181852086 -71404497 - FLAM_A SINE Alu -5 128 1 2034 125 13 16 chr2 181852180 181852485 -71404098 + AluSg SINE Alu 1 304 -6 1379 237 197 39 chr2 181852724 181853192 -71403391 - MLT1F LTR MaLR 0 542 1 2344 96 0 3 chr2 181853306 181853608 -71402975 + AluSp SINE Alu 2 302 -11 568 259 78 16 chr2 181853660 181853853 -71402730 - LTR16A LTR ERVL -7 443 239 274 184 20 0 chr2 181853850 181853899 -71402684 - MER63 DNA MER1_type -114 722 673 * 1427 200 17 24 chr2 181853900 181854190 -71402393 - AluJo SINE Alu -24 288 1 352 213 13 0 chr2 181854305 181854380 -71402203 - MER103 DNA DNA -75 91 16 226 253 127 0 chr2 181854660 181854739 -71401844 + MER102b DNA MER1_type 251 339 -2 341 290 15 23 chr2 181854834 181854965 -71401618 + CT-rich Low_complexity Low_complexity 2 131 0 587 262 102 0 chr2 181857147 181857334 -71399249 + MIR SINE MIR 57 262 0 184 298 115 10 chr2 181857317 181857421 -71399162 - MIR SINE MIR -98 164 50 * 493 319 16 11 chr2 181857451 181857642 -71398941 - L2 LINE L2 -176 3096 2905 804 148 0 44 chr2 181857868 181858003 -71398580 - FLAM_C SINE Alu -3 130 2 649 219 191 8 chr2 181858041 181858297 -71398286 - MER46C DNA MER2_type -21 317 15 266 267 122 23 chr2 181858289 181858461 -71398122 + MER113 DNA MER1_type? 164 352 -169 * 552 170 9 0 chr2 181858461 181858573 -71398010 + L1MC3 LINE L1 7673 7785 0 2008 144 53 14 chr2 181858619 181858980 -71397603 + THE1C LTR MaLR 1 375 0 28 0 0 0 chr2 181859486 181859514 -71397069 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 181860382 181860403 -71396180 + AT_rich Low_complexity Low_complexity 1 21 0 497 255 21 14 chr2 181862075 181862216 -71394367 - MIR SINE MIR -86 176 35 907 178 107 11 chr2 181862216 181862490 -71394093 + MSTD LTR MaLR 3 395 -1 2218 236 107 21 chr2 181863175 181863994 -71392589 - L1MEc LINE L1 -882 5333 4444 * 2632 234 54 31 chr2 181863981 181864511 -71392072 - L1MEc LINE L1 -2107 4108 3547 210 71 0 0 chr2 181864511 181864539 -71392044 + (TG)n Simple_repeat Simple_repeat 1 28 0 2632 234 54 31 chr2 181864539 181864932 -71391651 - L1MEc LINE L1 -2668 3547 3164 2482 136 31 14 chr2 181865389 181865808 -71390775 - MSTB LTR MaLR 0 426 1 2590 245 78 51 chr2 181866816 181867630 -71388953 - L1MEc LINE L1 -3038 3177 2387 1516 199 7 24 chr2 181867630 181867927 -71388656 - AluJo SINE Alu -14 298 7 2590 245 78 51 chr2 181867927 181868289 -71388294 - L1MEc LINE L1 -3828 2387 2036 1809 51 0 0 chr2 181868289 181868505 -71388078 - AluY SINE Alu -4 307 92 2590 245 78 51 chr2 181868505 181868639 -71387944 - L1MEc LINE L1 -4179 2036 1907 409 143 13 0 chr2 181868639 181868716 -71387867 - L1MB5 LINE L1 -6 6168 6091 2590 245 78 51 chr2 181868716 181868931 -71387652 - L1MEc LINE L1 -4308 1907 1665 2282 109 0 0 chr2 181869317 181869620 -71386963 + AluSx SINE Alu 1 303 -9 1727 176 25 0 chr2 181869655 181869939 -71386644 + AluJo SINE Alu 1 291 -21 2255 104 0 3 chr2 181869946 181870233 -71386350 + AluSx SINE Alu 1 286 -26 2103 119 0 20 chr2 181870254 181870556 -71386027 + AluSx SINE Alu 1 296 -16 962 257 75 26 chr2 181871247 181871586 -71384997 + MLT1I LTR MaLR 66 392 -17 1954 149 0 0 chr2 181872515 181872810 -71383773 - AluSx SINE Alu -17 295 1 1788 146 7 0 chr2 181872828 181873103 -71383480 + AluSx SINE Alu 14 290 -22 831 227 0 23 chr2 181874228 181874404 -71382179 - FRAM SINE Alu -12 164 1 485 188 0 0 chr2 181874516 181874601 -71381982 - AluJ/FLAM SINE Alu -227 85 1 229 155 155 24 chr2 181874791 181874875 -71381708 - L1MEc LINE L1 -4452 1944 1850 3014 157 12 4 chr2 181874904 181875420 -71381163 - L1MA5 LINE L1 -2 6298 5779 2247 93 0 3 chr2 181875423 181875725 -71380858 - AluSq SINE Alu -12 301 1 980 99 0 0 chr2 181875736 181875878 -71380705 - AluSc SINE Alu -3 306 165 1865 100 126 0 chr2 181875897 181876166 -71380417 - AluSq SINE Alu 0 303 1 5810 142 22 79 chr2 181876166 181876366 -71380217 - L1MA5 LINE L1 -515 5785 5575 2131 115 0 3 chr2 181876366 181876679 -71379904 - AluSx SINE Alu 0 312 1 5810 142 22 79 chr2 181876679 181876773 -71379810 - L1MA5 LINE L1 -725 5575 5477 2228 62 3 3 chr2 181876773 181877062 -71379521 + AluY SINE Alu 3 291 -20 5810 142 22 79 chr2 181877062 181877591 -71378992 - L1MA5 LINE L1 -823 5477 4919 1964 103 42 39 chr2 181877591 181877903 -71378680 - AluSq SINE Alu 0 313 1 5810 142 22 79 chr2 181877903 181877946 -71378637 - L1MA5 LINE L1 -1381 4919 4875 2149 93 3 0 chr2 181877946 181878235 -71378348 - AluSp SINE Alu -23 290 1 5810 142 22 79 chr2 181878235 181879102 -71377481 - L1MA5 LINE L1 -1425 4875 4149 5183 245 45 59 chr2 181879089 181879114 -71377469 - L1MEc LINE L1 -4518 1878 1854 * 2250 94 3 0 chr2 181879114 181879421 -71377162 - AluY SINE Alu -3 308 1 5183 245 45 59 chr2 181879421 181879648 -71376935 - L1MEc LINE L1 -4542 1854 1625 818 165 0 0 chr2 181879648 181879775 -71376808 - FLAM_A SINE Alu -6 127 1 5183 245 45 59 chr2 181879775 181879946 -71376637 - L1MEc LINE L1 -4771 1625 1453 2248 97 0 0 chr2 181879946 181880245 -71376338 - AluSx SINE Alu -13 299 1 5183 245 45 59 chr2 181880245 181880740 -71375843 - L1MEc LINE L1 -4943 1453 952 1050 214 9 5 chr2 181880740 181880955 -71375628 - MER20 DNA MER1_type -2 217 2 5183 245 45 59 chr2 181880955 181881016 -71375567 - L1MEc LINE L1 -5444 952 892 1515 156 85 4 chr2 181881016 181881286 -71375297 - AluJb SINE Alu -20 292 1 5183 245 45 59 chr2 181881286 181882168 -71374415 - L1MEc LINE L1 -5504 892 40 447 304 25 10 chr2 181882203 181882404 -71374179 - HAL1 LINE L1 -829 1678 1475 301 369 0 0 chr2 181883309 181883477 -71373106 + (CCA)n Simple_repeat Simple_repeat 1 168 0 322 252 47 0 chr2 181884128 181884235 -71372348 - HAL1 LINE L1 -1017 1490 1379 27 49 0 0 chr2 181884293 181884334 -71372249 + AT_rich Low_complexity Low_complexity 1 41 0 969 103 0 0 chr2 181884425 181884585 -71371998 + AluSg/x SINE Alu 146 305 0 892 167 16 174 chr2 181884721 181884760 -71371823 + LTR37A LTR ERV1 101 145 -281 2008 141 0 0 chr2 181884760 181885058 -71371525 + AluSx SINE Alu 1 298 -14 892 167 16 174 chr2 181885058 181885332 -71371251 + LTR37A LTR ERV1 145 345 -81 2019 132 7 0 chr2 181885332 181885628 -71370955 - AluSx SINE Alu -14 298 1 892 167 16 174 chr2 181885628 181885697 -71370886 + LTR37A LTR ERV1 345 423 -3 761 221 7 0 chr2 181885824 181885964 -71370619 + MER58A DNA MER1_type 30 170 -54 295 270 135 0 chr2 181886240 181886351 -71370232 + MIR3 SINE MIR 60 185 -23 367 313 10 0 chr2 181886398 181886497 -71370086 - L2 LINE L2 -6 3307 3208 348 284 28 57 chr2 181886558 181886699 -71369884 - MIR SINE MIR -45 217 81 2239 95 0 3 chr2 181886776 181887082 -71369501 + AluY SINE Alu 1 305 -6 267 239 55 103 chr2 181887083 181887152 -71369431 - L1MC5 LINE L1 -53 7908 7837 1683 177 0 10 chr2 181887152 181887446 -71369137 - AluJb SINE Alu -21 291 1 267 239 55 103 chr2 181887446 181887513 -71369070 - L1MC5 LINE L1 -124 7837 7768 1651 168 7 26 chr2 181887513 181887844 -71368739 - AluJb SINE Alu 0 312 1 267 239 55 103 chr2 181887844 181887978 -71368605 - L1MC5 LINE L1 -193 7768 7650 903 273 53 23 chr2 181888179 181888196 -71368387 + MLT1J LTR MaLR 38 53 -458 1232 213 10 104 chr2 181888196 181888599 -71367984 - MLT1A1 LTR MaLR 0 365 1 903 273 53 23 chr2 181888599 181888845 -71367738 + MLT1J LTR MaLR 53 309 -202 1635 81 0 0 chr2 181888891 181889101 -71367482 + L1PB1 LINE L1 5941 6150 -1 1323 192 36 45 chr2 181889428 181889736 -71366847 - AluJo SINE Alu -7 305 1 1975 122 14 7 chr2 181889886 181890180 -71366403 + AluJb SINE Alu 1 296 -16 2077 122 0 31 chr2 181890972 181891293 -71365290 + AluSx SINE Alu 1 311 -1 1733 258 64 40 chr2 181891499 181891825 -71364758 + MLT1G1 LTR MaLR 5 353 -242 2018 127 3 0 chr2 181891825 181892116 -71364467 + AluSq SINE Alu 2 293 -20 1733 258 64 40 chr2 181892116 181892366 -71364217 + MLT1G1 LTR MaLR 353 595 0 2198 116 0 0 chr2 181892727 181893030 -71363553 - AluSx SINE Alu -9 303 1 490 191 8 40 chr2 181893120 181893260 -71363323 + L1MC4 LINE L1 7878 7993 -2 204 179 0 0 chr2 181893731 181893770 -71362813 + (TATG)n Simple_repeat Simple_repeat 2 40 0 2142 95 3 26 chr2 181894422 181894727 -71361856 + AluSg SINE Alu 1 298 -12 2104 98 14 0 chr2 181894909 181895205 -71361378 - AluSx SINE Alu -12 300 1 1658 136 7 28 chr2 181896263 181896549 -71360034 + AluJb SINE Alu 3 282 -30 198 0 0 0 chr2 181896551 181896573 -71360010 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 907 205 0 0 chr2 181896597 181896763 -71359820 + FAM SINE Alu 1 166 -9 1365 209 49 53 chr2 181896793 181897261 -71359322 + L1MC5 LINE L1 7435 7900 -61 1682 154 3 17 chr2 181897270 181897569 -71359014 - AluJb SINE Alu -16 296 2 538 273 23 0 chr2 181897590 181897718 -71358865 + MIR SINE MIR 132 262 0 339 281 81 77 chr2 181898011 181898232 -71358351 - MIR SINE MIR -26 236 15 2110 91 3 3 chr2 181898337 181898633 -71357950 + AluSg SINE Alu 1 296 -14 297 75 0 0 chr2 181901287 181901327 -71355256 + (GGGA)n Simple_repeat Simple_repeat 2 41 0 210 71 0 0 chr2 181901650 181901678 -71354905 + (CGGGGG)n Simple_repeat Simple_repeat 4 31 0 204 40 0 0 chr2 181903600 181903625 -71352958 + (A)n Simple_repeat Simple_repeat 1 25 0 221 81 0 27 chr2 181904323 181904360 -71352223 + (CACCC)n Simple_repeat Simple_repeat 2 37 0 215 220 20 0 chr2 181905531 181905581 -71351002 + G-rich Low_complexity Low_complexity 3 53 0 236 69 35 35 chr2 181906058 181906116 -71350467 + (TTCTC)n Simple_repeat Simple_repeat 4 61 0 21 0 0 0 chr2 181906165 181906186 -71350397 + AT_rich Low_complexity Low_complexity 1 21 0 235 258 0 0 chr2 181909980 181910042 -71346541 + (CCG)n Simple_repeat Simple_repeat 1 62 0 336 48 0 0 chr2 181910525 181910567 -71346016 + (CGG)n Simple_repeat Simple_repeat 2 43 0 21 0 0 0 chr2 181913712 181913733 -71342850 + GC_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr2 181918685 181918712 -71337871 + AT_rich Low_complexity Low_complexity 1 27 0 803 168 0 24 chr2 181919051 181919176 -71337407 + FLAM_C SINE Alu 2 123 -20 1666 207 68 41 chr2 181920074 181920513 -71336070 + MLT1D LTR MaLR 1 451 -54 1045 104 7 0 chr2 181920513 181920677 -71335906 - AluSg/x SINE Alu 0 299 135 2195 82 3 10 chr2 181920677 181920983 -71335600 - AluSx SINE Alu -8 304 1 204 219 0 0 chr2 181922024 181922065 -71334518 + T-rich Low_complexity Low_complexity 3 43 0 252 122 0 0 chr2 181922108 181922149 -71334434 + (GGA)n Simple_repeat Simple_repeat 2 42 0 212 189 0 0 chr2 181922186 181922223 -71334360 + T-rich Low_complexity Low_complexity 1 37 0 2281 98 0 0 chr2 181922352 181922658 -71333925 + AluSg SINE Alu 1 306 -4 23 68 0 0 chr2 181922931 181922975 -71333608 + AT_rich Low_complexity Low_complexity 1 44 0 25 51 0 0 chr2 181924134 181924173 -71332410 + AT_rich Low_complexity Low_complexity 1 39 0 23001 34 1 0 chr2 181924284 181927097 -71329486 - L1P LINE L1 -2163 3983 1169 24 32 0 0 chr2 181927337 181927368 -71329215 + AT_rich Low_complexity Low_complexity 1 31 0 330 26 0 0 chr2 181928306 181928345 -71328238 + (CA)n Simple_repeat Simple_repeat 1 39 0 688 150 58 0 chr2 181928567 181928687 -71327896 + AluJb SINE Alu 1 127 -185 23 33 0 0 chr2 181929492 181929522 -71327061 + AT_rich Low_complexity Low_complexity 1 30 0 2169 92 0 3 chr2 181929585 181929867 -71326716 - AluSg SINE Alu -29 281 1 1265 159 70 8 chr2 181930536 181930794 -71325789 + L1MB8 LINE L1 5903 6176 -2 21 57 0 0 chr2 181930829 181930864 -71325719 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr2 181930961 181930984 -71325599 + AT_rich Low_complexity Low_complexity 1 23 0 710 271 64 31 chr2 181931737 181932107 -71324476 - L1ME4a LINE L1 -12 6109 5720 1887 127 4 0 chr2 181932107 181932374 -71324209 - AluSx SINE Alu -44 268 1 710 271 64 31 chr2 181932374 181932456 -71324127 - L1ME4a LINE L1 -401 5720 5642 23 0 0 0 chr2 181933009 181933032 -71323551 + AT_rich Low_complexity Low_complexity 1 23 0 246 62 0 0 chr2 181933363 181933395 -71323188 + (CA)n Simple_repeat Simple_repeat 2 33 0 304 259 0 5 chr2 181934044 181934128 -71322455 - MIR SINE MIR -62 146 64 566 276 174 53 chr2 181934263 181934585 -71321998 + L2 LINE L2 2945 3305 -8 710 233 127 60 chr2 181934586 181934818 -71321765 - L1ME LINE L1 -370 5751 5536 1869 162 7 7 chr2 181934818 181935126 -71321457 + AluJb SINE Alu 1 308 -4 710 233 127 60 chr2 181935126 181935352 -71321231 - L1ME LINE L1 -585 5536 5284 1824 157 10 10 chr2 181935360 181935653 -71320930 - AluJb SINE Alu -19 293 1 2388 93 0 3 chr2 181936008 181936320 -71320263 + AluY SINE Alu 1 311 0 1959 134 0 26 chr2 181937027 181937340 -71319243 + AluJb SINE Alu 1 305 -7 288 262 47 0 chr2 181937689 181937776 -71318807 - MIR SINE MIR -61 147 84 249 348 44 22 chr2 181938601 181938736 -71317847 - L3b LINE CR1 -94 1489 1352 874 204 0 12 chr2 181938888 181939060 -71317523 - MER58B DNA MER1_type -2 339 170 2346 95 0 3 chr2 181939209 181939515 -71317068 - AluSg SINE Alu -5 305 1 21 0 0 0 chr2 181939645 181939666 -71316917 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 181939771 181939799 -71316784 + AT_rich Low_complexity Low_complexity 1 28 0 2245 115 0 13 chr2 181940865 181941179 -71315404 + AluSg SINE Alu 1 310 0 2172 119 0 0 chr2 181941849 181942152 -71314431 + AluSx SINE Alu 1 303 -9 1476 198 23 45 chr2 181942508 181942862 -71313721 + L1MB7 LINE L1 5790 6135 -49 2352 96 0 0 chr2 181942906 181943209 -71313374 + AluSx SINE Alu 1 303 -9 3911 216 74 54 chr2 181943235 181944068 -71312515 + L1MB4 LINE L1 5393 6208 28 770 145 68 0 chr2 181944068 181944185 -71312398 - FLAM_C SINE Alu -8 125 1 3911 216 74 54 chr2 181944185 181944396 -71312187 + L1MB4 LINE L1 6208 5560 -620 2065 132 3 23 chr2 181944396 181944706 -71311877 + AluJo SINE Alu 1 304 -8 3911 216 74 54 chr2 181944706 181945329 -71311254 + L1MB4 LINE L1 5559 6168 -12 2260 211 42 20 chr2 181944917 181945461 -71311122 + L1MD3 LINE L1 6694 7249 -746 * 2103 121 3 3 chr2 181945645 181945950 -71310633 - AluSp SINE Alu -8 305 1 1021 167 13 86 chr2 181945955 181946188 -71310395 - MER20 DNA MER1_type -1 218 3 294 254 0 0 chr2 181946188 181946251 -71310332 + L2 LINE L2 2986 3048 -224 1352 97 46 80 chr2 181947348 181947586 -71308997 + MER30 DNA MER1_type 1 230 0 2001 133 7 7 chr2 181947673 181947967 -71308616 - AluSx SINE Alu -16 296 3 28 0 0 0 chr2 181948177 181948205 -71308378 + AT_rich Low_complexity Low_complexity 1 28 0 2398 95 87 3 chr2 181948215 181948561 -71308022 + THE1C LTR MaLR 1 375 0 9557 113 57 28 chr2 181948561 181950096 -71306487 + THE1C-int LTR MaLR 1 1580 0 2544 103 8 24 chr2 181950096 181950476 -71306107 + THE1C LTR MaLR 1 374 -1 246 243 83 83 chr2 181950495 181950639 -71305944 - L1MC/D LINE L1 -1964 5844 5701 1720 149 0 0 chr2 181950821 181951082 -71305501 + AluSx SINE Alu 45 305 0 1858 132 35 57 chr2 181951226 181951474 -71305109 + L1MB8 LINE L1 5785 6022 -156 2129 110 10 0 chr2 181951474 181951765 -71304818 - AluSx SINE Alu -17 295 2 1858 132 35 57 chr2 181951765 181951917 -71304666 + L1MB8 LINE L1 6022 6176 -2 1118 342 61 37 chr2 181951920 181952621 -71303962 - L2 LINE L2 -613 2701 1984 483 174 209 26 chr2 181952976 181953091 -71303492 - FLAM_C SINE Alu -7 136 1 667 184 50 0 chr2 181953169 181953310 -71303273 - L1MA10 LINE L1 -7 6327 6180 386 329 133 13 chr2 181953897 181954055 -71302528 + MIR3 SINE MIR 5 181 -27 492 157 59 10 chr2 181954055 181954157 -71302426 + MER106A DNA MER1_type 130 236 0 382 306 84 20 chr2 181954310 181954504 -71302079 - MIR SINE MIR -41 221 6 257 277 202 0 chr2 181955779 181955873 -71300710 + L2 LINE L2 3201 3313 0 2366 73 7 3 chr2 181956109 181956410 -71300173 + AluSq SINE Alu 1 302 -11 434 242 96 73 chr2 181956446 181956624 -71299959 - MIR SINE MIR 0 262 81 21 36 0 0 chr2 181956807 181956835 -71299748 + AT_rich Low_complexity Low_complexity 1 28 0 219 306 65 0 chr2 181957247 181957309 -71299274 - L2 LINE L2 -63 3209 3144 848 211 0 0 chr2 181957576 181957742 -71298841 + FRAM SINE Alu 1 166 0 24 67 0 0 chr2 181958756 181958801 -71297782 + AT_rich Low_complexity Low_complexity 1 45 0 220 352 74 28 chr2 181959220 181959328 -71297255 + L2 LINE L2 3160 3272 0 1257 229 7 39 chr2 181959886 181960191 -71296392 - AluJo SINE Alu -17 295 1 322 243 108 54 chr2 181960245 181960356 -71296227 - MIR SINE MIR -50 212 96 25 51 0 0 chr2 181960521 181960560 -71296023 + AT_rich Low_complexity Low_complexity 1 39 0 1904 159 3 3 chr2 181961984 181962279 -71294304 + AluJo SINE Alu 1 295 -17 26 0 0 0 chr2 181962589 181962615 -71293968 + AT_rich Low_complexity Low_complexity 1 26 0 3596 153 42 8 chr2 181962622 181963518 -71293065 + L1MD1 LINE L1 5254 6242 0 26 74 0 0 chr2 181963979 181964033 -71292550 + AT_rich Low_complexity Low_complexity 1 54 0 11778 26 0 0 chr2 181964037 181966190 -71290393 - L1PA2 LINE L1 -3 6152 4000 404 42 102 8 chr2 181966290 181966408 -71290175 + (TA)n Simple_repeat Simple_repeat 2 130 0 776 159 23 8 chr2 181966408 181966540 -71290043 - AluJb SINE Alu -178 134 1 746 74 0 0 chr2 181967615 181967710 -71288873 - AluY SINE Alu -216 95 1 1882 142 7 10 chr2 181967822 181968125 -71288458 + AluJb SINE Alu 1 302 -10 666 176 20 0 chr2 181968133 181968281 -71288302 + GA-rich Low_complexity Low_complexity 1 151 0 850 240 103 40 chr2 181968569 181968948 -71287635 - L1MC5 LINE L1 -257 7704 7302 2220 110 7 0 chr2 181969868 181970176 -71286407 - AluSx SINE Alu -2 310 1 1878 123 71 0 chr2 181970363 181970632 -71285951 - AluSx SINE Alu -24 288 1 1159 219 44 7 chr2 181970698 181970972 -71285611 + L1ME2 LINE L1 5851 6134 -30 5546 56 1 0 chr2 181971158 181971850 -71284733 + L1PA6 LINE L1 5452 6144 -10 1845 172 0 25 chr2 181973654 181973974 -71282609 + AluJb SINE Alu 1 312 0 3942 184 73 122 chr2 181974103 181974170 -71282413 + L1MCa LINE L1 12 81 -5964 1461 60 0 22 chr2 181974170 181974354 -71282229 + AluY SINE Alu 131 310 -1 3942 184 73 122 chr2 181974354 181975178 -71281405 + L1MCa LINE L1 81 944 -5101 2343 101 48 28 chr2 181975178 181975535 -71281048 - THE1B LTR MaLR 0 364 1 11547 92 8 9 chr2 181975537 181977118 -71279465 - THE1B-int LTR MaLR -2 1578 1 2075 132 53 28 chr2 181977118 181977473 -71279110 - THE1B LTR MaLR 0 364 1 3942 184 73 122 chr2 181977473 181978072 -71278511 + L1MCa LINE L1 943 1194 -4851 2446 196 65 53 chr2 181978070 181978801 -71277782 + L1MCa LINE L1 1851 2572 -3992 * 1548 156 35 73 chr2 181978801 181978939 -71277644 + AluJo SINE Alu 1 143 -169 2107 83 0 24 chr2 181978939 181979228 -71277355 + AluSc SINE Alu 5 286 -23 1548 156 35 73 chr2 181979228 181979403 -71277180 + AluJo SINE Alu 143 302 -10 2446 196 65 53 chr2 181979403 181980168 -71276415 + L1MCa LINE L1 2572 3357 -3207 909 205 24 0 chr2 181980169 181980335 -71276248 + FRAM SINE Alu 1 164 -12 8163 125 30 1 chr2 181980378 181981697 -71274886 - Tigger1 DNA MER2_type -1062 1356 1 576 244 8 0 chr2 181981863 181981986 -71274597 - FLAM_C SINE Alu -19 124 1 2363 91 10 0 chr2 181982269 181982576 -71274007 + AluY SINE Alu 1 310 -1 5741 50 151 7 chr2 181982676 181983540 -71273043 - L1P LINE L1 -5155 991 4 545 189 23 17 chr2 181984475 181984650 -71271933 - L1MEc LINE L1 -5248 1148 973 2169 111 3 0 chr2 181984697 181984986 -71271597 + AluSx SINE Alu 1 290 -22 27 0 0 0 chr2 181984986 181985013 -71271570 + AT_rich Low_complexity Low_complexity 1 27 0 321 319 18 57 chr2 181985052 181985384 -71271199 + L1MDa LINE L1 27 345 -6195 2446 68 3 16 chr2 181985918 181986229 -71270354 - AluSp SINE Alu -6 307 1 1534 250 21 45 chr2 181986400 181986639 -71269944 - L1MEc LINE L1 -5522 683 440 2361 120 0 0 chr2 181986639 181986948 -71269635 - AluSx SINE Alu -3 309 1 1534 250 21 45 chr2 181986948 181987267 -71269316 - L1MEc LINE L1 -5765 440 138 25 65 0 0 chr2 181987278 181987324 -71269259 + AT_rich Low_complexity Low_complexity 1 46 0 273 235 18 118 chr2 181987472 181987642 -71268941 - L1MC4a LINE L1 -1867 5941 5789 2198 108 3 16 chr2 181987806 181988122 -71268461 - AluSx SINE Alu 0 312 1 355 337 59 0 chr2 181988143 181988345 -71268238 - L1MC4a LINE L1 -456 5665 5452 232 0 0 0 chr2 181988354 181988385 -71268198 + L1MA1 LINE L1 6264 6294 -8 1770 190 0 0 chr2 181988712 181989002 -71267581 - AluSx SINE Alu -22 290 1 307 220 441 0 chr2 181989172 181989290 -71267293 + MER91A DNA MER1_type 1 170 -26 445 297 101 0 chr2 181989311 181989520 -71267063 - L2 LINE L2 -736 2578 2349 1149 74 0 19 chr2 181990198 181990360 -71266223 + L1PA10 LINE L1 6010 6168 0 366 260 73 32 chr2 181990398 181990457 -71266126 - MIR SINE MIR -12 250 195 2134 123 0 3 chr2 181990457 181990750 -71265833 - AluSg SINE Alu -18 292 1 366 260 73 32 chr2 181990750 181990813 -71265770 - MIR SINE MIR -67 195 123 348 264 83 0 chr2 181992227 181992348 -71264235 - HAL1 LINE L1 -2375 132 2 1686 152 3 35 chr2 181992457 181992746 -71263837 - AluJo SINE Alu -32 280 1 821 279 113 38 chr2 181993489 181994430 -71262153 + L1MDa LINE L1 1126 2136 -4585 799 294 66 25 chr2 181994466 181994861 -71261722 + LTR16B LTR ERVL 54 464 0 480 247 127 56 chr2 181994933 181995200 -71261383 + L1MDa LINE L1 2294 2619 -3961 805 159 0 14 chr2 181995206 181995344 -71261239 + AluJo SINE Alu 6 141 -171 2184 114 14 3 chr2 181995348 181995645 -71260938 + AluSx SINE Alu 1 300 -12 22 0 0 0 chr2 181996516 181996538 -71260045 + AT_rich Low_complexity Low_complexity 1 22 0 2178 109 0 0 chr2 181996541 181996826 -71259757 - AluY SINE Alu -26 285 1 1905 147 6 22 chr2 181996835 181997147 -71259436 - AluJo SINE Alu -4 308 2 292 314 42 25 chr2 181997271 181997389 -71259194 - L2 LINE L2 -20 3252 3133 593 245 109 22 chr2 181997924 181998108 -71258475 - MIR SINE MIR 0 262 63 289 267 61 8 chr2 181998431 181998562 -71258021 - HAL1b LINE L1 -452 896 759 45 19 0 0 chr2 181998700 181998752 -71257831 + AT_rich Low_complexity Low_complexity 1 52 0 227 288 15 0 chr2 181998847 181998913 -71257670 + MIR SINE MIR 37 103 -105 426 299 13 25 chr2 181998922 181999079 -71257504 - L1MC/D LINE L1 -2376 5432 5278 280 311 15 8 chr2 181999291 181999423 -71257160 - L1MC/D LINE L1 -1133 5013 4881 2140 110 0 0 chr2 181999547 181999860 -71256723 + AluSx SINE Alu 1 313 0 2227 75 7 0 chr2 182000053 182000335 -71256248 - AluSg SINE Alu -26 284 1 21 0 0 0 chr2 182001434 182001455 -71255128 + AT_rich Low_complexity Low_complexity 1 21 0 263 335 102 23 chr2 182002481 182002657 -71253926 + L2 LINE L2 2554 2743 -571 5725 133 45 6 chr2 182002658 182003667 -71252916 - L1MC1 LINE L1 0 6333 5286 2102 97 0 36 chr2 182003674 182003983 -71252600 - AluSx SINE Alu -14 298 1 479 291 37 15 chr2 182004284 182004418 -71252165 + L2 LINE L2 3173 3309 -4 21 36 0 0 chr2 182005925 182005953 -71250630 + AT_rich Low_complexity Low_complexity 1 28 0 2365 87 3 0 chr2 182005970 182006269 -71250314 - AluY SINE Alu -11 300 1 22 35 0 0 chr2 182006330 182006359 -71250224 + AT_rich Low_complexity Low_complexity 1 29 0 406 117 0 0 chr2 182006502 182006562 -71250021 + MLT1A1 LTR MaLR 1 60 -305 437 285 29 36 chr2 182006564 182006701 -71249882 + L2 LINE L2 3173 3308 -5 1518 186 35 16 chr2 182006762 182007079 -71249504 + MLT1A1 LTR MaLR 41 363 -2 27 0 0 0 chr2 182007096 182007123 -71249460 + AT_rich Low_complexity Low_complexity 1 27 0 2095 129 0 32 chr2 182007168 182007477 -71249106 - AluSx SINE Alu -13 299 1 1747 161 0 70 chr2 182007805 182008135 -71248448 - AluSx SINE Alu -5 307 1 1844 143 20 40 chr2 182008402 182008658 -71247925 - MER2 DNA MER2_type 0 344 94 2244 84 0 7 chr2 182008658 182008980 -71247603 - AluSx SINE Alu 0 320 1 1844 143 20 40 chr2 182008980 182009072 -71247511 - MER2 DNA MER2_type -250 94 2 382 184 96 73 chr2 182009128 182009264 -71247319 - MIR SINE MIR -46 216 78 2489 75 3 7 chr2 182010784 182011090 -71245493 - AluSp SINE Alu -8 305 1 1708 129 80 28 chr2 182011175 182011461 -71245122 + AluJb SINE Alu 1 301 -11 2163 110 7 0 chr2 182011714 182012013 -71244570 - AluSx SINE Alu -11 301 1 369 288 141 6 chr2 182012084 182012254 -71244329 - MIR SINE MIR -3 259 67 39 0 0 0 chr2 182014600 182014639 -71241944 + AT_rich Low_complexity Low_complexity 1 39 0 2109 69 0 0 chr2 182014639 182014913 -71241670 - L1PA5 LINE L1 0 6154 5881 339 25 0 0 chr2 182014930 182014970 -71241613 + (TG)n Simple_repeat Simple_repeat 1 40 0 1846 146 11 18 chr2 182014970 182015251 -71241332 - AluJb SINE Alu -33 279 1 2024 130 17 10 chr2 182016652 182016945 -71239638 + AluSx SINE Alu 1 295 -17 482 270 44 7 chr2 182017090 182017227 -71239356 + MIR SINE MIR 120 261 -1 2206 93 21 0 chr2 182017341 182017632 -71238951 + AluSp SINE Alu 1 297 -16 1921 152 0 19 chr2 182017868 182018177 -71238406 - AluSx SINE Alu -9 303 1 2429 103 0 0 chr2 182019406 182019718 -71236865 + AluSx SINE Alu 1 312 0 1911 133 73 7 chr2 182020438 182020724 -71235859 + AluSq SINE Alu 3 307 -6 273 211 34 34 chr2 182020739 182020914 -71235669 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 * 440 206 59 0 chr2 182020795 182021037 -71235546 + (TA)n Simple_repeat Simple_repeat 1 256 0 1014 121 0 6 chr2 182021050 182021215 -71235368 + L1PA16 LINE L1 5868 6031 -135 47 33 0 0 chr2 182021215 182021276 -71235307 + AT_rich Low_complexity Low_complexity 1 61 0 595 198 6 62 chr2 182021410 182021473 -71235110 + L1PA16 LINE L1 4960 5025 -1121 2173 111 3 0 chr2 182021473 182021762 -71234821 + AluSx SINE Alu 1 290 -22 595 198 6 62 chr2 182021762 182021875 -71234708 + L1PA16 LINE L1 5025 5126 -1020 2914 9 0 0 chr2 182021898 182022216 -71234367 - AluYb8 SINE Alu 0 318 1 5830 100 19 13 chr2 182022244 182022942 -71233641 + L1PA16 LINE L1 5118 5825 -341 1631 172 45 7 chr2 182022942 182023075 -71233508 + AluJb SINE Alu 1 127 -185 2423 90 0 0 chr2 182023075 182023376 -71233207 + AluSx SINE Alu 3 303 -9 1631 172 45 7 chr2 182023376 182023532 -71233051 + AluJb SINE Alu 127 301 -11 5830 100 19 13 chr2 182023532 182023871 -71232712 + L1PA16 LINE L1 5825 6161 -5 268 259 59 22 chr2 182024212 182024347 -71232236 + L1ME4a LINE L1 5810 5949 -172 2269 94 0 13 chr2 182024408 182024707 -71231876 + AluSx SINE Alu 1 295 -17 21 0 0 0 chr2 182024968 182024989 -71231594 + AT_rich Low_complexity Low_complexity 1 21 0 1686 163 49 10 chr2 182025039 182025327 -71231256 - AluJo SINE Alu -11 301 3 237 280 0 27 chr2 182025737 182025812 -71230771 - MIR SINE MIR -14 248 176 2156 107 0 20 chr2 182026030 182026330 -71230253 - AluSg SINE Alu -16 294 1 2595 65 0 0 chr2 182026759 182027066 -71229517 + AluY SINE Alu 1 307 -4 225 143 41 20 chr2 182027377 182027426 -71229157 + L1MA6 LINE L1 5911 5960 -337 845 231 78 59 chr2 182027434 182027502 -71229081 + AluJo SINE Alu 1 66 -246 2190 92 3 0 chr2 182027502 182027817 -71228766 - AluSx SINE Alu 0 316 1 845 231 78 59 chr2 182027817 182028002 -71228581 + AluJo SINE Alu 66 260 -52 425 131 0 0 chr2 182028002 182028063 -71228520 + (GGAA)n Simple_repeat Simple_repeat 2 62 0 830 114 47 0 chr2 182028063 182028276 -71228307 + GA-rich Low_complexity Low_complexity 1 223 0 1263 148 106 0 chr2 182028284 182028521 -71228062 + L1MA6 LINE L1 5967 6228 -72 350 96 0 0 chr2 182028523 182028603 -71227980 + AluJo SINE Alu 247 326 0 2233 107 0 3 chr2 182029224 182029523 -71227060 - AluSx SINE Alu -14 298 1 386 230 123 83 chr2 182029629 182029689 -71226894 + L1ME4a LINE L1 5592 5648 -473 1777 177 7 0 chr2 182029689 182029983 -71226600 - AluJb SINE Alu -15 297 2 386 230 123 83 chr2 182029983 182030334 -71226249 + L1ME4a LINE L1 5648 6016 -105 1906 170 0 0 chr2 182030411 182030711 -71225872 + AluSx SINE Alu 1 300 -12 2241 104 0 0 chr2 182030849 182031136 -71225447 - AluSg SINE Alu -23 287 1 1858 130 54 0 chr2 182031141 182031418 -71225165 - AluJo SINE Alu -20 292 1 336 252 81 146 chr2 182031433 182031742 -71224841 + L3 LINE CR1 843 1131 -446 329 333 115 23 chr2 182031741 182032002 -71224581 + L2 LINE L2 2311 2595 -719 * 1352 160 31 51 chr2 182032005 182032187 -71224396 - MER58 DNA MER1_type -2161 259 82 2103 127 16 0 chr2 182032187 182032494 -71224089 + AluSx SINE Alu 1 312 0 1352 160 31 51 chr2 182032494 182032567 -71224016 - MER58 DNA MER1_type -2338 82 9 1975 132 0 7 chr2 182032956 182033251 -71223332 + AluSx SINE Alu 13 305 -7 2441 78 0 7 chr2 182033536 182033843 -71222740 - AluY SINE Alu -6 305 1 322 270 20 0 chr2 182034164 182034264 -71222319 - MIR SINE MIR 0 262 161 182 297 31 47 chr2 182034297 182034361 -71222222 - MER5B DNA MER1_type -25 153 91 1789 157 13 17 chr2 182035317 182035617 -71220966 - AluJb SINE Alu -11 301 3 1894 160 7 0 chr2 182035697 182035990 -71220593 - AluSx SINE Alu -17 295 1 321 256 234 0 chr2 182036241 182036378 -71220205 - MIR3 SINE MIR -1 207 39 201 74 0 0 chr2 182036493 182036520 -71220063 + (T)n Simple_repeat Simple_repeat 1 27 0 1664 181 38 3 chr2 182036590 182036882 -71219701 - AluJo SINE Alu -10 302 1 288 311 34 50 chr2 182037482 182037601 -71218982 + MIR3 SINE MIR 56 172 -36 332 155 144 31 chr2 182037721 182037818 -71218765 - MER113 DNA MER1_type? -393 128 21 246 284 25 0 chr2 182038397 182038478 -71218105 - MARNA DNA Mariner -19 567 485 450 239 150 48 chr2 182038619 182038786 -71217797 - MIR SINE MIR -2 260 77 21 36 0 0 chr2 182039395 182039423 -71217160 + AT_rich Low_complexity Low_complexity 1 28 0 2158 127 0 0 chr2 182040256 182040590 -71215993 + AluSx SINE Alu 1 334 0 1822 129 68 18 chr2 182040599 182040879 -71215704 + AluSx SINE Alu 1 294 -18 1720 154 52 3 chr2 182041126 182041412 -71215171 - AluSx SINE Alu -7 305 6 218 273 55 0 chr2 182041819 182041874 -71214709 + L3 LINE CR1 1509 1566 -11 443 307 52 10 chr2 182041916 182042108 -71214475 - MIR SINE MIR -52 210 11 1726 141 0 0 chr2 182043271 182043513 -71213070 - AluSx SINE Alu -40 272 31 728 81 108 45 chr2 182043559 182043670 -71212913 + FLAM_C SINE Alu 1 118 -15 30 59 0 0 chr2 182043677 182043728 -71212855 + AT_rich Low_complexity Low_complexity 1 51 0 2089 92 7 33 chr2 182044492 182044795 -71211788 + AluSg SINE Alu 6 300 -10 180 0 0 0 chr2 182044849 182044869 -71211714 + (A)n Simple_repeat Simple_repeat 1 20 0 2245 131 0 0 chr2 182045504 182045816 -71210767 + AluSx SINE Alu 1 312 0 294 293 0 10 chr2 182047098 182047197 -71209386 - L2 LINE L2 -1397 1917 1820 672 285 184 33 chr2 182047360 182047756 -71208827 - L2 LINE L2 -2497 817 362 2855 7 7 0 chr2 182048394 182048703 -71207880 + AluYa5 SINE Alu 1 311 0 2228 124 0 0 chr2 182049704 182050010 -71206573 + AluSg SINE Alu 3 308 -2 1282 107 60 0 chr2 182050553 182050769 -71205814 - L1MA8 LINE L1 -1 6290 6062 1535 169 59 10 chr2 182051608 182051898 -71204685 - AluJo SINE Alu -8 304 1 434 306 69 0 chr2 182052775 182052919 -71203664 + MIR SINE MIR 1 154 -108 649 252 177 0 chr2 182053532 182053758 -71202825 + L2 LINE L2 3009 3274 -39 228 67 0 0 chr2 182053771 182053801 -71202782 + (TGAA)n Simple_repeat Simple_repeat 4 33 0 32 43 0 0 chr2 182053845 182053891 -71202692 + AT_rich Low_complexity Low_complexity 1 46 0 1838 128 0 40 chr2 182054149 182054446 -71202137 - AluJb SINE Alu -16 296 12 21 36 0 0 chr2 182054821 182054849 -71201734 + AT_rich Low_complexity Low_complexity 1 28 0 1510 127 201 0 chr2 182055934 182056178 -71200405 - AluSx SINE Alu -9 293 1 394 316 90 13 chr2 182056178 182056333 -71200250 + MIR SINE MIR 92 258 -4 366 319 0 9 chr2 182056468 182056581 -71200002 + L2 LINE L2 3200 3311 -2 2287 99 3 3 chr2 182056961 182057263 -71199320 - AluSp SINE Alu -11 302 1 318 174 87 0 chr2 182057959 182058028 -71198555 + MIR SINE MIR 97 171 -91 1470 159 74 4 chr2 182058041 182058298 -71198285 + AluJb SINE Alu 15 289 -23 2385 83 0 0 chr2 182058693 182058995 -71197588 + AluSx SINE Alu 1 302 -10 217 247 21 21 chr2 182060437 182060530 -71196053 + (CCCCAG)n Simple_repeat Simple_repeat 2 94 0 * 254 214 29 14 chr2 182060461 182060531 -71196052 + C-rich Low_complexity Low_complexity 1 71 0 285 207 69 46 chr2 182060923 182061010 -71195573 + MIR SINE MIR 5 93 -169 3119 140 27 25 chr2 182061208 182061728 -71194855 + LTR26B LTR ERV1 1 521 -10 31 26 0 0 chr2 182061797 182061835 -71194748 + AT_rich Low_complexity Low_complexity 1 38 0 1724 160 3 17 chr2 182062627 182062758 -71193825 + AluJb SINE Alu 5 136 -176 2443 74 3 0 chr2 182062758 182063054 -71193529 + AluSx SINE Alu 1 297 -15 1724 160 3 17 chr2 182063054 182063222 -71193361 + AluJb SINE Alu 136 300 -12 13449 107 12 80 chr2 182063344 182065035 -71191548 + L1M1 LINE L1 737 2541 -5024 2005 164 0 0 chr2 182065035 182065327 -71191256 + AluJb SINE Alu 1 292 -20 13449 107 12 80 chr2 182065327 182065409 -71191174 + L1M1 LINE L1 2541 2627 -4938 2030 84 4 0 chr2 182065409 182065659 -71190924 - AluSx SINE Alu -61 251 1 13449 107 12 80 chr2 182065659 182066159 -71190424 + L1M1 LINE L1 2627 2857 -4708 1162 134 75 16 chr2 182066226 182066413 -71190170 + AluSg SINE Alu 1 198 -112 965 127 0 38 chr2 182066657 182066814 -71189769 + FRAM SINE Alu 21 171 -5 2169 119 3 0 chr2 182067428 182067730 -71188853 + AluSx SINE Alu 1 303 -9 5868 112 27 20 chr2 182068273 182069139 -71187444 - MER4D LTR ERV1 0 872 1 2011 194 35 8 chr2 182069139 182069535 -71187048 - MER4D-int LTR ERV1 0 6758 6352 1774 190 51 49 chr2 182069645 182070035 -71186548 - MER4D-int LTR ERV1 -439 6319 5929 349 133 55 64 chr2 182070040 182070147 -71186436 - MER4D-int LTR ERV1 -1420 5338 4835 207 0 0 0 chr2 182070816 182070839 -71185744 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 2040 107 4 0 chr2 182071006 182071268 -71185315 - AluSc SINE Alu -46 263 1 2198 148 45 38 chr2 182071327 182071725 -71184858 - MER57A LTR ERV1 -2 401 1 329 216 27 126 chr2 182071817 182071928 -71184655 - MER4D-int LTR ERV1 -4242 3878 3779 1067 176 73 74 chr2 182072097 182072235 -71184348 - MER4D-int LTR ERV1 -2136 4021 3884 1943 136 13 0 chr2 182072235 182072537 -71184046 - AluSx SINE Alu -6 306 1 1067 176 73 74 chr2 182072537 182072621 -71183962 - MER4D-int LTR ERV1 -2273 3884 3801 2240 101 0 10 chr2 182072621 182072927 -71183656 + AluY SINE Alu 1 303 -8 1067 176 73 74 chr2 182072927 182073138 -71183445 - MER4D-int LTR ERV1 -2356 3801 2465 242 65 0 0 chr2 182073232 182073263 -71183320 + MER39B LTR ERV1 3 33 -620 1646 157 5 51 chr2 182073267 182073629 -71182954 - MER4A LTR ERV1 0 664 261 369 176 88 11 chr2 182073629 182073720 -71182863 - MER4A LTR ERV1 -566 98 1 3102 163 91 5 chr2 182073727 182074290 -71182293 + MER39B LTR ERV1 41 651 -2 703 169 12 117 chr2 182074291 182074352 -71182231 - MER4B-int LTR ERV1 -2898 3700 3634 1634 162 6 47 chr2 182074352 182074673 -71181910 - AluJb SINE Alu 0 312 5 703 169 12 117 chr2 182074673 182074905 -71181678 - MER4B-int LTR ERV1 -2964 3634 2427 3403 192 69 15 chr2 182074905 182075630 -71180953 + L1M1 LINE L1 8 1850 -5715 991 166 108 0 chr2 182075625 182075903 -71180680 + L1M1 LINE L1 545 852 -6713 * 195 373 0 13 chr2 182076234 182076309 -71180274 - MIR SINE MIR -84 124 51 630 291 112 25 chr2 182077447 182077883 -71178700 + MLT1K LTR MaLR 3 476 0 274 258 135 0 chr2 182077885 182077974 -71178609 + L1ME4a LINE L1 5959 6059 -62 341 292 25 42 chr2 182078141 182078261 -71178322 + L2 LINE L2 3155 3272 0 1888 134 52 0 chr2 182078420 182078709 -71177874 + AluSx SINE Alu 1 303 0 2125 112 3 7 chr2 182079015 182079309 -71177274 + AluSx SINE Alu 1 293 -19 196 295 9 67 chr2 182079900 182080005 -71176578 + L2 LINE L2 3204 3302 -11 1979 143 10 10 chr2 182080085 182080392 -71176191 - AluJb SINE Alu -5 307 1 2087 145 0 6 chr2 182080994 182081305 -71175278 + AluJo SINE Alu 1 309 -3 293 321 22 54 chr2 182082319 182082503 -71174080 + MER5B DNA MER1_type 1 178 0 1629 174 46 7 chr2 182082531 182082812 -71173771 - AluJo SINE Alu -20 292 1 333 274 9 0 chr2 182083320 182083426 -71173157 - L1M4 LINE L1 -1007 5139 5033 881 115 7 50 chr2 182083654 182083793 -71172790 + AluJo/FLAM SINE Alu 1 133 -169 2245 114 14 0 chr2 182083794 182084084 -71172499 + AluSx SINE Alu 1 294 -18 596 241 76 38 chr2 182084388 182084625 -71171958 + AluJb SINE Alu 6 251 -61 1085 146 22 40 chr2 182084876 182085102 -71171481 - MER4-int LTR ERV1 -3188 3410 3189 841 180 7 0 chr2 182085111 182085250 -71171333 - MER4D LTR ERV1 -732 140 1 2326 103 0 13 chr2 182085517 182085828 -71170755 - AluSq SINE Alu -6 307 1 852 242 58 17 chr2 182086226 182086466 -71170117 + MIR SINE MIR 13 262 0 357 324 47 40 chr2 182086528 182086968 -71169615 - L1MEd LINE L1 -893 1597 1066 191 182 0 0 chr2 182087249 182087282 -71169301 - MIR SINE MIR -59 149 117 371 275 99 55 chr2 182087346 182087528 -71169055 + L2 LINE L2 2554 2743 -571 294 37 37 74 chr2 182087529 182087583 -71169000 - L1MC1 LINE L1 0 6333 6282 * 2172 147 0 3 chr2 182087579 182087906 -71168677 - L1MC/D LINE L1 -538 5795 5470 * 4551 191 58 59 chr2 182087902 182088625 -71167958 - L1MCa LINE L1 -3947 2479 1757 2374 97 3 0 chr2 182088625 182088933 -71167650 + AluSp SINE Alu 5 313 0 4551 191 58 59 chr2 182088933 182088968 -71167615 - L1MCa LINE L1 -4669 1757 1723 2072 134 3 0 chr2 182088968 182089260 -71167323 - AluSx SINE Alu -19 293 1 4551 191 58 59 chr2 182089260 182089491 -71167092 - L1MCa LINE L1 -4703 1723 1493 2178 72 65 0 chr2 182089491 182089769 -71166814 + AluSg1 SINE Alu 1 296 -13 4551 191 58 59 chr2 182089769 182090159 -71166424 - L1MCa LINE L1 -4933 1493 1104 2376 104 0 0 chr2 182090159 182090466 -71166117 - AluSx SINE Alu -5 307 1 4551 191 58 59 chr2 182090466 182090763 -71165820 - L1MCa LINE L1 -5322 1104 710 415 304 92 30 chr2 182090982 182091361 -71165222 - MLT1L LTR MaLR -16 572 189 939 191 0 0 chr2 182091706 182091868 -71164715 - FRAM SINE Alu -1 165 4 2192 117 0 28 chr2 182091880 182092197 -71164386 - AluSg SINE Alu -2 308 1 659 267 35 0 chr2 182092200 182092372 -71164211 + MER58A DNA MER1_type 47 224 0 2061 141 0 16 chr2 182092387 182092700 -71163883 - AluSx SINE Alu -4 308 1 387 300 91 9 chr2 182093199 182093419 -71163164 + L2 LINE L2 2509 2746 -568 2306 92 0 3 chr2 182093419 182093713 -71162870 + AluSx SINE Alu 3 295 -17 413 284 147 25 chr2 182093825 182094152 -71162431 + L2 LINE L2 2946 3312 -1 1554 245 34 32 chr2 182094422 182094834 -71161749 - MLT1C LTR MaLR 0 467 55 1761 165 0 36 chr2 182095186 182095495 -71161088 - AluJb SINE Alu -14 298 1 22 0 0 0 chr2 182095984 182096006 -71160577 + AT_rich Low_complexity Low_complexity 1 22 0 180 111 0 0 chr2 182097342 182097369 -71159214 + (CAT)n Simple_repeat Simple_repeat 1 27 0 2322 80 3 0 chr2 182097369 182097655 -71158928 - AluSx SINE Alu -25 287 1 225 233 0 0 chr2 182097852 182097895 -71158688 + GA-rich Low_complexity Low_complexity 2 44 0 2097 147 0 6 chr2 182098552 182098866 -71157717 - AluSx SINE Alu 0 312 1 947 253 96 31 chr2 182099015 182099383 -71157200 - HAL1 LINE L1 -590 1917 1517 1512 166 12 109 chr2 182099383 182099787 -71156796 - MLT1A1 LTR MaLR 0 365 1 947 253 96 31 chr2 182099787 182099837 -71156746 - HAL1 LINE L1 -990 1517 1472 2454 88 0 0 chr2 182100744 182101050 -71155533 + AluSg SINE Alu 1 306 -4 510 269 26 0 chr2 182101253 182101409 -71155174 + L1M4 LINE L1 4787 4946 -1200 313 333 29 0 chr2 182101365 182101470 -71155113 - L1MC/D LINE L1 -2167 5641 5534 * 1080 238 127 96 chr2 182101593 182102463 -71154120 - L2 LINE L2 -2 3311 2470 2059 179 27 38 chr2 182102463 182102911 -71153672 + L1MB5 LINE L1 5732 6174 0 1080 238 127 96 chr2 182102911 182103113 -71153470 - L2 LINE L2 -843 2470 2276 2127 105 3 17 chr2 182103113 182103407 -71153176 + AluSg SINE Alu 5 294 -16 1080 238 127 96 chr2 182103407 182103615 -71152968 - L2 LINE L2 -1037 2276 2001 252 346 25 10 chr2 182103743 182103945 -71152638 - L1M4 LINE L1 -3572 2574 2370 4227 147 50 6 chr2 182103973 182104675 -71151908 - MER44D DNA MER2_type 0 605 1 2387 85 3 0 chr2 182105101 182105395 -71151188 - AluSx SINE Alu -17 295 1 1147 227 104 24 chr2 182105501 182105706 -71150877 - MER34 LTR ERV1 0 542 355 2402 90 0 3 chr2 182105706 182106016 -71150567 + AluSx SINE Alu 1 309 -3 1147 227 104 24 chr2 182106016 182106306 -71150277 - MER34 LTR ERV1 -187 355 1 429 326 51 34 chr2 182106458 182106752 -71149831 - HAL1 LINE L1 -739 1768 1470 384 280 14 53 chr2 182106810 182106973 -71149610 - HAL1 LINE L1 -1157 1350 1195 2561 62 3 0 chr2 182106973 182107279 -71149304 - AluY SINE Alu -4 307 1 384 280 14 53 chr2 182107279 182107322 -71149261 - HAL1 LINE L1 -1312 1195 1152 1452 93 0 10 chr2 182107324 182107517 -71149066 - AluSq SINE Alu -3 310 120 394 154 0 2 chr2 182107532 182107592 -71148991 - AluSq SINE Alu -249 54 1 207 154 0 0 chr2 182107666 182107705 -71148878 - L2 LINE L2 -1 3312 3274 856 144 8 0 chr2 182107737 182107869 -71148714 - FLAM_C SINE Alu 0 133 1 413 268 51 7 chr2 182107871 182108009 -71148574 - LTR67 LTR ERVL -4 553 410 1727 184 103 72 chr2 182108150 182108257 -71148326 + MLT1D LTR MaLR 8 110 -395 2548 56 0 7 chr2 182108257 182108561 -71148022 + AluY SINE Alu 1 302 -9 1727 184 103 72 chr2 182108561 182108936 -71147647 + MLT1D LTR MaLR 110 505 0 520 305 66 0 chr2 182109816 182110016 -71146567 + MIR SINE MIR 16 235 -27 547 279 14 0 chr2 182110068 182110215 -71146368 - MIR SINE MIR -109 153 5 860 227 122 3 chr2 182110445 182110705 -71145878 - L1ME3 LINE L1 -2 6160 5862 2454 90 0 0 chr2 182111261 182111561 -71145022 - AluSg SINE Alu -10 300 1 247 246 56 123 chr2 182112441 182112620 -71143963 + MER5B DNA MER1_type 1 167 -11 2200 125 0 3 chr2 182112964 182113277 -71143306 - AluSx SINE Alu 0 312 1 2035 149 7 3 chr2 182113441 182113750 -71142833 - AluSx SINE Alu -2 310 1 2307 106 3 0 chr2 182114697 182115008 -71141575 + AluSq SINE Alu 1 312 -1 1761 166 0 0 chr2 182115412 182115683 -71140900 + AluJo SINE Alu 36 306 -6 1893 205 89 51 chr2 182115703 182116131 -71140452 - L1MC5 LINE L1 -53 7908 7443 2328 93 0 0 chr2 182116131 182116420 -71140163 - AluSg SINE Alu -21 289 1 1893 205 89 51 chr2 182116420 182116674 -71139909 - L1MC5 LINE L1 -518 7443 7200 2420 105 0 0 chr2 182116802 182117115 -71139468 + AluSq SINE Alu 1 313 0 390 298 42 36 chr2 182117360 182117528 -71139055 + MLT1L LTR MaLR 321 489 -126 276 238 209 0 chr2 182117618 182117723 -71138860 + MLT1L LTR MaLR 489 615 0 2123 151 0 0 chr2 182118270 182118582 -71138001 + AluJo SINE Alu 1 312 0 268 318 0 11 chr2 182120649 182120737 -71135846 - MIR3 SINE MIR -24 184 98 228 111 0 0 chr2 182121564 182121600 -71134983 + (GA)n Simple_repeat Simple_repeat 1 36 0 217 200 0 0 chr2 182121843 182121878 -71134705 + C-rich Low_complexity Low_complexity 4 38 0 6104 144 99 99 chr2 182121935 182123633 -71132950 - pTR5 LTR ERV1 0 2438 741 2330 78 0 0 chr2 182123754 182124047 -71132536 + AluY SINE Alu 1 293 -18 2241 98 3 32 chr2 182124745 182125061 -71131522 + AluSx SINE Alu 1 307 -5 616 229 57 46 chr2 182125939 182126114 -71130469 + MER5A DNA MER1_type 13 189 0 1953 116 0 0 chr2 182126522 182126781 -71129802 - AluSg SINE Alu -17 293 35 1826 130 31 31 chr2 182127112 182127366 -71129217 - L1MB2 LINE L1 -2 6169 5913 936 89 7 52 chr2 182127366 182127501 -71129082 + FLAM_C SINE Alu 4 132 -1 1826 130 31 31 chr2 182127501 182127568 -71129015 - L1MB2 LINE L1 -257 5914 5848 2133 142 0 0 chr2 182127742 182128053 -71128530 + AluSx SINE Alu 1 311 -1 21 57 0 0 chr2 182128115 182128150 -71128433 + AT_rich Low_complexity Low_complexity 1 35 0 576 201 56 28 chr2 182128217 182128361 -71128222 - MER5A DNA MER1_type -2 187 40 206 287 52 70 chr2 182128569 182128684 -71127899 + L2 LINE L2 3200 3312 -1 270 216 97 89 chr2 182128718 182128910 -71127673 + MIR SINE MIR 31 221 -41 1838 153 17 7 chr2 182129867 182130162 -71126421 - AluJo SINE Alu -14 298 1 502 226 0 9 chr2 182131082 182131197 -71125386 - MER69 DNA AcHobo 0 2526 2413 1673 159 17 30 chr2 182131209 182131505 -71125078 + AluJo SINE Alu 1 292 -20 250 250 17 0 chr2 182131543 182131603 -71124980 - MER69 DNA AcHobo -116 61 1 239 196 0 0 chr2 182132206 182132252 -71124331 + L2 LINE L2 3268 3313 0 198 0 0 0 chr2 182132343 182132365 -71124218 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 1148 8 0 0 chr2 182132365 182132485 -71124098 - L1PA3 LINE L1 -10 6145 6026 1055 0 0 0 chr2 182132485 182132592 -71123991 - U6 snRNA snRNA 0 107 1 409 263 18 121 chr2 182132682 182132906 -71123677 - MIR SINE MIR -14 248 48 259 271 43 0 chr2 182133043 182133113 -71123470 + MIR3 SINE MIR 98 170 -38 392 280 40 0 chr2 182133115 182133240 -71123343 - MER94 DNA DNA -2 132 3 274 292 226 0 chr2 182133533 182133670 -71122913 - MIR SINE MIR 0 262 95 24 0 0 0 chr2 182135087 182135111 -71121472 + AT_rich Low_complexity Low_complexity 1 24 0 1348 140 192 4 chr2 182136284 182136555 -71120028 + MER33 DNA MER1_type 3 324 0 260 232 152 0 chr2 182137370 182137469 -71119114 - L1ME4a LINE L1 -4 6117 6004 277 285 78 50 chr2 182137486 182137665 -71118918 - L1ME4a LINE L1 -210 5911 5728 545 200 84 8 chr2 182137677 182137814 -71118769 - L1M3 LINE L1 -700 5483 5334 1817 151 31 14 chr2 182137816 182138108 -71118475 + AluJb SINE Alu 3 299 -13 192 350 50 0 chr2 182138268 182138348 -71118235 - L2 LINE L2 0 3272 3189 666 212 15 36 chr2 182138955 182139092 -71117491 + FLAM_C SINE Alu 2 135 -8 204 369 39 39 chr2 182139100 182139203 -71117380 - L2 LINE L2 -27 3245 3143 333 0 0 0 chr2 182139431 182139468 -71117115 + (CA)n Simple_repeat Simple_repeat 1 37 0 2275 92 10 0 chr2 182139515 182139810 -71116773 - AluSp SINE Alu -15 298 1 2410 80 0 26 chr2 182140493 182140805 -71115778 - AluSg SINE Alu -6 304 1 434 143 0 0 chr2 182140831 182140894 -71115689 - U7 snRNA snRNA 0 63 1 193 301 65 11 chr2 182143342 182143435 -71113148 + MIR SINE MIR 86 183 -79 330 274 152 20 chr2 182144268 182144465 -71112118 - MIR SINE MIR -12 250 28 1248 266 41 10 chr2 182144518 182144912 -71111671 + L1ME4a LINE L1 5521 5926 -195 383 213 128 43 chr2 182144927 182145068 -71111515 + L1ME4a LINE L1 5967 6119 -2 816 224 12 0 chr2 182145165 182145330 -71111253 + MER5B DNA MER1_type 3 169 -9 199 353 148 8 chr2 182145970 182146092 -71110491 + MIR3 SINE MIR 3 141 -67 943 168 0 46 chr2 182148032 182148179 -71108404 + FRAM SINE Alu 1 135 -177 2028 98 0 4 chr2 182148179 182148444 -71108139 - AluSg SINE Alu -12 298 35 943 168 0 46 chr2 182148444 182148469 -71108114 + FRAM SINE Alu 135 160 -16 1441 261 68 35 chr2 182150072 182150527 -71106056 + MER74A LTR ERVL 19 488 -70 2043 229 82 27 chr2 182152516 182153067 -71103516 - MLT1G LTR MaLR 0 590 10 201 39 0 0 chr2 182153597 182153623 -71102960 + (A)n Simple_repeat Simple_repeat 1 26 0 638 266 107 17 chr2 182153810 182154043 -71102540 - MIR SINE MIR -2 260 7 2494 61 0 22 chr2 182154259 182154572 -71102011 + AluY SINE Alu 1 306 -5 407 277 124 81 chr2 182156306 182156678 -71099905 + L2 LINE L2 2833 3220 -52 364 244 104 17 chr2 182156704 182156819 -71099764 + MLT1F LTR MaLR 1 125 -417 411 199 191 15 chr2 182157004 182157140 -71099443 + MLT1H LTR MaLR 385 544 -5 2250 99 3 56 chr2 182158416 182158740 -71097843 + AluSp SINE Alu 1 307 -6 978 313 78 21 chr2 182159378 182159932 -71096651 - L2 LINE L2 -14 3299 2714 1747 174 7 10 chr2 182159943 182160253 -71096330 - AluJb SINE Alu -3 309 1 23 33 0 0 chr2 182160358 182160388 -71096195 + AT_rich Low_complexity Low_complexity 1 30 0 182 174 148 87 chr2 182160389 182160504 -71096079 + MIR SINE MIR 85 206 -56 295 269 0 0 chr2 182161336 182161429 -71095154 + (CCA)n Simple_repeat Simple_repeat 1 93 0 835 191 13 0 chr2 182161757 182161909 -71094674 + AluJb SINE Alu 137 290 -22 1456 146 23 42 chr2 182162032 182162292 -71094291 + AluJo SINE Alu 1 255 -57 386 281 76 22 chr2 182162362 182162586 -71093997 - L1ME4a LINE L1 -173 5948 5713 180 0 0 0 chr2 182162699 182162719 -71093864 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 360 189 172 41 chr2 182162736 182162858 -71093725 + LTR37A LTR ERV1 39 176 -250 353 306 102 39 chr2 182162960 182163678 -71092905 - L1ME4a LINE L1 -1528 4618 3856 1740 171 35 3 chr2 182163705 182163991 -71092592 + AluJb SINE Alu 1 295 -17 490 305 43 53 chr2 182163993 182164101 -71092482 - L1ME4a LINE L1 -2334 3812 3704 1193 124 55 55 chr2 182164101 182164318 -71092265 - MER20 DNA MER1_type -1 218 2 490 305 43 53 chr2 182164318 182164511 -71092072 - L1ME4a LINE L1 -2442 3704 3514 2051 114 41 0 chr2 182165077 182165367 -71091216 - AluSp SINE Alu -11 302 1 2189 126 0 0 chr2 182166018 182166312 -71090271 - AluSx SINE Alu -18 294 1 365 262 176 48 chr2 182166882 182167069 -71089514 - MIR SINE MIR -50 212 2 24 0 0 0 chr2 182167273 182167297 -71089286 + AT_rich Low_complexity Low_complexity 1 24 0 856 161 27 0 chr2 182168046 182168195 -71088388 - L1ME1 LINE L1 -5 6161 6009 1187 156 0 0 chr2 182168616 182168783 -71087800 - FAM SINE Alu -8 167 1 884 200 78 0 chr2 182168938 182169118 -71087465 - MIR SINE MIR -27 235 42 275 228 109 43 chr2 182169326 182169418 -71087165 - MIR3 SINE MIR -16 192 95 413 233 29 0 chr2 182169680 182169783 -71086800 + MER113 DNA MER1_type? 5 110 -411 1607 138 0 31 chr2 182169875 182170136 -71086447 - AluJb SINE Alu -6 306 54 547 183 227 35 chr2 182170148 182170377 -71086206 - MER5C DNA MER1_type -21 303 31 259 217 43 0 chr2 182170461 182170530 -71086053 + MIR SINE MIR 88 159 -103 2201 90 28 0 chr2 182170691 182170979 -71085604 + AluSx SINE Alu 1 296 -16 30 0 0 0 chr2 182172445 182172475 -71084108 + AT_rich Low_complexity Low_complexity 1 30 0 313 248 234 29 chr2 182172806 182172943 -71083640 + MER5A DNA MER1_type 11 175 -14 1684 147 10 51 chr2 182173066 182173378 -71083205 - AluJo SINE Alu -13 299 1 213 255 21 64 chr2 182175240 182175334 -71081249 + L2 LINE L2 3182 3271 -1 785 186 88 10 chr2 182175637 182175830 -71080753 + Charlie4a DNA MER1_type 4 211 -297 336 131 8 4 chr2 182175866 182175973 -71080610 + Charlie4a DNA MER1_type 274 427 -81 701 192 0 54 chr2 182176000 182176170 -71080413 + FLAM_C SINE Alu 3 143 0 185 246 18 35 chr2 182176211 182176268 -71080315 + MIR SINE MIR 19 74 -134 2270 144 31 31 chr2 182176986 182177376 -71079207 + MLT1B LTR MaLR 1 390 0 288 0 0 0 chr2 182177734 182177766 -71078817 + (CA)n Simple_repeat Simple_repeat 2 33 0 2272 114 0 0 chr2 182178666 182178963 -71077620 - AluSx SINE Alu -12 300 4 21 0 0 0 chr2 182179177 182179198 -71077385 + AT_rich Low_complexity Low_complexity 1 21 0 222 37 0 0 chr2 182179279 182179306 -71077277 + (TC)n Simple_repeat Simple_repeat 2 28 0 267 31 0 0 chr2 182180737 182180769 -71075814 + (TC)n Simple_repeat Simple_repeat 1 32 0 1905 158 0 34 chr2 182181028 182181170 -71075413 + AluJo SINE Alu 1 146 -166 279 0 0 0 chr2 182181170 182181201 -71075382 + (TA)n Simple_repeat Simple_repeat 2 32 0 1905 158 0 34 chr2 182181201 182181381 -71075202 + AluJo SINE Alu 146 312 0 284 265 186 0 chr2 182181470 182181572 -71075011 + MIR SINE MIR 71 191 -71 1013 61 0 0 chr2 182182684 182182799 -71073784 + AluSq/x SINE Alu 19 133 -179 1546 197 6 25 chr2 182184364 182184679 -71071904 - AluJo SINE Alu -2 310 2 193 237 0 0 chr2 182185177 182185215 -71071368 + MIR3 SINE MIR 125 162 -46 252 302 12 0 chr2 182185263 182185349 -71071234 + MER20B DNA MER1_type 77 163 -620 342 61 0 0 chr2 182185853 182185902 -71070681 + (TC)n Simple_repeat Simple_repeat 1 49 0 1854 130 58 14 chr2 182185942 182186234 -71070349 - MER1B DNA MER1_type -1 338 34 747 292 185 26 chr2 182186340 182186871 -71069712 + L2 LINE L2 2660 3272 -41 2151 120 10 16 chr2 182186973 182187281 -71069302 - AluSx SINE Alu 0 312 7 367 280 64 19 chr2 182187789 182187946 -71068637 - MIR3 SINE MIR -15 193 30 690 313 117 43 chr2 182188704 182189241 -71067342 + MLT1K LTR MaLR 10 586 -2 5354 138 23 5 chr2 182189712 182190586 -71065997 - Ricksha DNA DNA -7 3239 2350 896 138 7 0 chr2 182190602 182190747 -71065836 - Ricksha DNA DNA -1899 147 2 326 247 37 0 chr2 182190760 182190841 -71065742 + MLT1K LTR MaLR 132 215 -373 1409 211 44 42 chr2 182191010 182191047 -71065536 + L1MC5 LINE L1 7539 7574 -421 2075 100 4 18 chr2 182191047 182191328 -71065255 + AluSg SINE Alu 1 277 -33 180 0 0 0 chr2 182191330 182191350 -71065233 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 1409 211 44 42 chr2 182191350 182191749 -71064834 + L1MC5 LINE L1 7574 7995 0 717 206 0 113 chr2 182192063 182192345 -71064238 - Charlie5 DNA MER1_type -27 2585 2336 1957 188 40 48 chr2 182192732 182193051 -71063532 - MSTD LTR MaLR 0 396 79 2179 74 0 0 chr2 182193051 182193321 -71063262 + AluY SINE Alu 37 306 -5 1957 188 40 48 chr2 182193321 182193400 -71063183 - MSTD LTR MaLR -317 79 1 405 264 40 63 chr2 182193408 182193582 -71063001 + L2 LINE L2 2733 2902 -412 459 225 75 8 chr2 182193657 182193777 -71062806 + L2 LINE L2 3182 3309 -4 204 258 106 93 chr2 182194163 182194314 -71062269 - L2 LINE L2 0 3313 3161 1937 257 80 10 chr2 182195033 182195655 -71060928 + MER20B DNA MER1_type 118 783 0 292 257 129 10 chr2 182196946 182197047 -71059536 - L2 LINE L2 -7 3306 3194 197 0 0 67 chr2 182197258 182197288 -71059295 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 1594 172 28 28 chr2 182197796 182198087 -71058496 - AluJo SINE Alu -17 295 5 684 252 163 41 chr2 182198097 182198611 -71057972 - L1ME4a LINE L1 -80 6041 5451 207 227 23 0 chr2 182199494 182199538 -71057045 + MIR SINE MIR 218 262 0 27 49 0 0 chr2 182199741 182199782 -71056801 + AT_rich Low_complexity Low_complexity 1 41 0 729 263 94 18 chr2 182204445 182204669 -71051914 - MIR SINE MIR 0 262 22 201 74 0 0 chr2 182204838 182204865 -71051718 + (CA)n Simple_repeat Simple_repeat 2 28 0 1394 160 55 0 chr2 182204868 182205106 -71051477 - AluJo SINE Alu -25 287 37 292 214 126 10 chr2 182205137 182205240 -71051343 - L1ME LINE L1 -265 5856 5742 477 195 81 0 chr2 182205249 182205336 -71051247 + AluJb SINE Alu 194 287 -25 2003 156 3 0 chr2 182205557 182205858 -71050725 + AluJb SINE Alu 3 304 -8 259 311 167 0 chr2 182206070 182206202 -71050381 - MIR3 SINE MIR -14 194 41 278 228 18 0 chr2 182206500 182206557 -71050026 - L2 LINE L2 -6 3266 3209 315 279 111 39 chr2 182207157 182207365 -71049218 - L2 LINE L2 -875 2439 2217 1342 156 36 25 chr2 182207452 182207727 -71048856 - MER33 DNA MER1_type 0 324 47 390 205 77 17 chr2 182208111 182208228 -71048355 + MER113 DNA MER1_type? 7 130 -391 266 200 46 0 chr2 182208347 182208412 -71048171 + MER113 DNA MER1_type? 454 521 0 583 195 71 13 chr2 182208918 182209070 -71047513 - Charlie4a DNA MER1_type -143 365 205 1679 210 67 30 chr2 182209070 182209475 -71047108 - MLT1F1 LTR MaLR 0 567 148 816 183 78 0 chr2 182209474 182209632 -71046951 + Charlie4 DNA MER1_type 42 213 -1748 397 346 0 15 chr2 182209632 182209762 -71046821 + MLT1E LTR MaLR 1 128 -465 338 248 124 13 chr2 182211351 182211504 -71045079 + MIR SINE MIR 28 197 -65 324 242 16 0 chr2 182211777 182211839 -71044744 + MER2 DNA MER2_type 278 340 -5 1796 240 45 26 chr2 182212339 182212948 -71043635 + L2 LINE L2 2263 2938 -376 559 177 24 0 chr2 182213301 182213425 -71043158 + CT-rich Low_complexity Low_complexity 2 128 0 1837 143 13 32 chr2 182213429 182213743 -71042840 - AluJo SINE Alu -4 308 1 449 234 99 35 chr2 182214626 182214767 -71041816 + MIR3 SINE MIR 38 187 -21 749 188 0 38 chr2 182215000 182215133 -71041450 + FAM SINE Alu 40 167 -18 3451 128 40 2 chr2 182216973 182217520 -71039063 + L1MB2 LINE L1 5601 6168 -3 2298 113 3 0 chr2 182218322 182218631 -71037952 + AluSq SINE Alu 1 310 -3 196 317 100 42 chr2 182219521 182219641 -71036942 - L3b LINE CR1 -337 1246 1120 212 276 17 0 chr2 182219825 182219883 -71036700 + GA-rich Low_complexity Low_complexity 2 60 0 228 35 0 0 chr2 182221421 182221450 -71035133 + (T)n Simple_repeat Simple_repeat 1 29 0 892 155 72 10 chr2 182222257 182222451 -71034132 - L1MC2 LINE L1 -2 6342 6137 3898 154 77 25 chr2 182222451 182223215 -71033368 - L1MC3 LINE L1 -191 7594 6791 2493 58 0 0 chr2 182223410 182223705 -71032878 + AluY SINE Alu 10 304 -7 4969 135 45 87 chr2 182224156 182225159 -71031424 - L1MA6 LINE L1 0 6300 5353 1667 154 39 0 chr2 182225159 182225419 -71031164 - AluJo SINE Alu -20 292 23 4969 135 45 87 chr2 182225419 182225821 -71030762 - L1MA6 LINE L1 -947 5353 4936 2568 157 25 106 chr2 182225813 182226164 -71030419 + L1 LINE L1 4123 4501 -1645 * 2175 37 0 0 chr2 182226164 182226405 -71030178 + L1PA3 LINE L1 5911 6152 -3 2568 157 25 106 chr2 182226405 182226626 -71029957 + L1 LINE L1 4501 4472 -1674 1123 67 13 7 chr2 182226626 182226776 -71029807 - L1PA5 LINE L1 0 6154 6004 2568 157 25 106 chr2 182226776 182227221 -71029362 + L1 LINE L1 4471 4951 -1195 467 311 37 19 chr2 182227790 182227951 -71028632 - MIR SINE MIR -12 250 87 187 79 53 0 chr2 182228040 182228078 -71028505 + (CATAC)n Simple_repeat Simple_repeat 3 42 0 444 303 58 72 chr2 182228259 182228357 -71028226 - L1M4 LINE L1 -2945 3201 3103 2524 63 0 3 chr2 182228357 182228660 -71027923 - AluY SINE Alu -9 302 1 916 199 6 6 chr2 182228661 182228827 -71027756 - FRAM SINE Alu 0 166 1 444 303 58 72 chr2 182228827 182229086 -71027497 - L1M4 LINE L1 -3042 3104 2847 432 285 104 92 chr2 182229185 182229443 -71027140 - L1M4 LINE L1 -3404 2742 2489 1851 146 11 0 chr2 182229443 182229723 -71026860 - AluSx SINE Alu -29 283 1 432 285 104 92 chr2 182229723 182230053 -71026530 - L1M4 LINE L1 -3657 2489 2147 339 290 61 38 chr2 182231165 182231349 -71025234 - MIR SINE MIR -43 219 31 516 282 198 0 chr2 182232351 182232553 -71024030 + MIR SINE MIR 21 262 0 1825 144 39 3 chr2 182232637 182232922 -71023661 - AluSx SINE Alu -11 301 7 449 210 0 0 chr2 182233143 182233224 -71023359 + FLAM_A SINE Alu 40 120 -22 396 318 149 17 chr2 182284249 182284551 -70972032 + L2 LINE L2 2905 3246 -26 540 196 0 0 chr2 182285240 182285342 -70971241 + MIR SINE MIR 61 162 -100 344 212 110 34 chr2 182285472 182285590 -70970993 + MIR SINE MIR 136 262 0 390 293 138 24 chr2 182285677 182285844 -70970739 + MER5A DNA MER1_type 4 189 0 202 203 87 0 chr2 182285862 182285931 -70970652 + MIR SINE MIR 65 139 -123 337 255 27 67 chr2 182286072 182286221 -70970362 + MIR SINE MIR 35 177 -85 764 144 22 29 chr2 182287011 182287150 -70969433 - MER20 DNA MER1_type -17 202 65 24 32 0 0 chr2 182287896 182287927 -70968656 + AT_rich Low_complexity Low_complexity 1 31 0 4610 87 22 41 chr2 182288182 182288859 -70967724 + MER4A LTR ERV1 1 664 0 182 216 0 0 chr2 182289352 182289389 -70967194 + MIR SINE MIR 218 254 -8 21 0 0 0 chr2 182289389 182289410 -70967173 + AT_rich Low_complexity Low_complexity 1 21 0 1787 163 0 3 chr2 182289445 182289733 -70966850 + AluJo SINE Alu 1 287 -25 207 114 0 0 chr2 182289736 182289771 -70966812 + (TAAAA)n Simple_repeat Simple_repeat 1 35 0 24 0 0 0 chr2 182290475 182290499 -70966084 + AT_rich Low_complexity Low_complexity 1 24 0 2363 96 3 0 chr2 182291254 182291557 -70965026 + AluSx SINE Alu 1 304 -8 478 276 133 43 chr2 182291698 182291908 -70964675 + MIR SINE MIR 13 241 -21 2267 103 0 7 chr2 182291985 182292285 -70964298 + AluSx SINE Alu 1 298 -14 292 149 0 0 chr2 182292317 182292364 -70964219 + L1MB7 LINE L1 6039 6085 -99 1210 169 0 40 chr2 182292364 182292589 -70963994 - AluJb SINE Alu -78 234 19 358 273 55 53 chr2 182293379 182293666 -70962917 - L1MC/D LINE L1 -527 5594 5303 2391 155 102 9 chr2 182295487 182297086 -70959497 - SATR1 Satellite Satellite -2 1747 1 2219 169 115 43 chr2 182297111 182298308 -70958275 - SATR1 Satellite Satellite 0 1282 1 8094 125 130 35 chr2 182298308 182299855 -70956728 - pTR5 LTR ERV1 -1 2437 744 2498 153 95 0 chr2 182299855 182300404 -70956179 - SATR1 Satellite Satellite -1 601 1 401 283 87 0 chr2 182300573 182300711 -70955872 + MIR SINE MIR 46 195 -67 1855 129 61 0 chr2 182300792 182301070 -70955513 + AluSx SINE Alu 1 295 -17 1450 170 123 7 chr2 182301329 182301605 -70954978 + MER6 DNA MER2_type 1 308 -557 2178 124 79 63 chr2 182301605 182302031 -70954552 - MSTB1 LTR MaLR 0 432 2 1757 138 35 3 chr2 182302034 182302324 -70954259 + MER6 DNA MER2_type 306 864 -1 400 257 153 70 chr2 182302636 182303107 -70953476 - MLT1F1 LTR MaLR -31 536 2 233 274 53 35 chr2 182303107 182303211 -70953372 - MLT1K LTR MaLR -185 403 298 755 249 23 0 chr2 182304295 182304472 -70952111 + MER58A DNA MER1_type 6 186 -38 233 286 11 55 chr2 182304588 182304679 -70951904 - L2 LINE L2 -85 3228 3142 1846 149 44 3 chr2 182305154 182305450 -70951133 + AluJo SINE Alu 5 312 0 1822 156 7 26 chr2 182306100 182306408 -70950175 - AluJb SINE Alu -10 302 1 225 286 0 84 chr2 182306864 182306983 -70949600 - MER81 DNA DNA -5 109 1 1957 204 104 15 chr2 182307649 182308111 -70948472 - MLT1F LTR MaLR 0 542 40 1853 208 33 30 chr2 182308940 182309334 -70947249 - MLT2C1 LTR ERVL -2 395 1 21 0 0 0 chr2 182310324 182310345 -70946238 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr2 182310551 182310586 -70945997 + AT_rich Low_complexity Low_complexity 1 35 0 642 211 188 34 chr2 182310589 182310797 -70945786 - L1M4 LINE L1 -473 5711 5472 415 139 0 51 chr2 182311863 182311942 -70944641 + AluJo SINE Alu 86 160 -152 857 120 60 0 chr2 182312094 182312227 -70944356 + AluJo SINE Alu 164 304 -8 633 219 112 143 chr2 182312803 182313168 -70943415 + LTR8A LTR ERV1 1 354 -373 853 124 0 0 chr2 182313176 182313289 -70943294 + AluJb SINE Alu 1 113 -199 1928 136 32 0 chr2 182313289 182313568 -70943015 + THE1B LTR MaLR 1 288 -76 2567 96 14 19 chr2 182313570 182313936 -70942647 - THE1B LTR MaLR 0 364 1 6466 63 3 3 chr2 182313936 182314716 -70941867 - THE1B-int LTR MaLR 0 1580 801 944 129 0 82 chr2 182314716 182314887 -70941696 + AluJ SINE Alu 149 305 -7 1342 139 0 20 chr2 182316225 182316456 -70940127 + AluJb SINE Alu 87 313 0 257 81 105 151 chr2 182316772 182316784 -70939799 + L1MA9 LINE L1 6209 6220 -92 3588 124 26 2 chr2 182316784 182317325 -70939258 + MER41C LTR ERV1 1 554 0 257 81 105 151 chr2 182317325 182317398 -70939185 + L1MA9 LINE L1 6220 6290 -22 25 83 0 0 chr2 182317519 182317579 -70939004 + AT_rich Low_complexity Low_complexity 1 60 0 192 77 0 0 chr2 182318061 182318087 -70938496 + (TG)n Simple_repeat Simple_repeat 2 27 0 2344 80 0 3 chr2 182318087 182318374 -70938209 - AluSq SINE Alu -27 286 1 325 225 11 0 chr2 182320666 182320755 -70935828 - LTR49-int LTR ERV1 -5182 1149 1060 2156 98 0 14 chr2 182320825 182321120 -70935463 + AluSx SINE Alu 1 291 -21 4028 63 0 0 chr2 182321220 182321709 -70934874 - MER41A LTR ERV1 -63 491 3 556 222 7 22 chr2 182321709 182321844 -70934739 + L1MD3 LINE L1 7853 7985 -10 504 270 107 11 chr2 182322420 182322598 -70933985 - MIR SINE MIR -67 195 1 189 0 0 0 chr2 182322879 182322900 -70933683 + (GGAA)n Simple_repeat Simple_repeat 1 21 0 475 284 60 69 chr2 182323103 182323365 -70933218 - L1MC4a LINE L1 0 6121 5858 2705 184 98 26 chr2 182323365 182323947 -70932636 - MLT1E3 LTR MaLR 0 624 1 475 284 60 69 chr2 182323947 182324293 -70932290 - L1MC4a LINE L1 -263 5858 5523 320 252 145 15 chr2 182324342 182324473 -70932110 + MIR SINE MIR 9 156 -106 1768 231 104 11 chr2 182324485 182324997 -70931586 - MLT1F1 LTR MaLR 0 567 11 834 261 154 20 chr2 182325221 182325670 -70930913 - LTR33 LTR ERVL -9 512 4 2193 125 0 0 chr2 182326446 182326742 -70929841 - AluSx SINE Alu -16 296 1 1008 250 35 17 chr2 182327151 182327507 -70929076 - L1MDa LINE L1 -4436 2104 1733 488 173 0 0 chr2 182327856 182327931 -70928652 - Tigger5 DNA MER2_type -2 2321 2247 317 224 0 0 chr2 182327934 182328001 -70928582 + Tigger5 DNA MER2_type 2250 2316 -7 415 211 13 0 chr2 182328004 182328080 -70928503 - Tigger5 DNA MER2_type -2244 79 3 1153 233 59 40 chr2 182328126 182328603 -70927980 - L1MDa LINE L1 -4925 1796 1311 1204 304 63 32 chr2 182328608 182329209 -70927374 - L1MDa LINE L1 -5753 968 349 607 267 68 27 chr2 182329523 182329946 -70926637 + MLT1K LTR MaLR 95 610 -5 2395 84 7 0 chr2 182330928 182331226 -70925357 - AluSp SINE Alu -13 300 1 2168 117 0 7 chr2 182331566 182331865 -70924718 + AluSx SINE Alu 1 297 -15 872 119 78 36 chr2 182331890 182332083 -70924500 - L1MA8 LINE L1 -5 6286 6086 1381 171 130 49 chr2 182332131 182332438 -70924145 + L1MA9 LINE L1 5768 6111 -201 1909 184 0 0 chr2 182332438 182332737 -70923846 - AluJb SINE Alu -13 299 1 1381 171 130 49 chr2 182332737 182332797 -70923786 + L1MA9 LINE L1 6111 6165 -147 1856 164 13 3 chr2 182332992 182333297 -70923286 - AluJo SINE Alu -4 308 1 206 311 14 54 chr2 182333400 182333474 -70923109 + L2 LINE L2 3196 3266 -6 25 0 0 0 chr2 182334512 182334537 -70922046 + AT_rich Low_complexity Low_complexity 1 25 0 260 309 25 0 chr2 182334980 182335061 -70921522 - L2 LINE L2 0 3313 3231 26 74 0 0 chr2 182335370 182335424 -70921159 + AT_rich Low_complexity Low_complexity 1 54 0 1963 121 3 7 chr2 182336060 182336368 -70920215 - AluSc SINE Alu 0 307 1 217 282 99 0 chr2 182336667 182336738 -70919845 + L2 LINE L2 3157 3234 -38 228 188 83 0 chr2 182338707 182338755 -70917828 + L2 LINE L2 3262 3313 0 252 0 0 0 chr2 182340604 182340632 -70915951 + (A)n Simple_repeat Simple_repeat 1 28 0 506 257 105 6 chr2 182342511 182342682 -70913901 - MIR SINE MIR -15 247 60 318 250 115 10 chr2 182343257 182343361 -70913222 + MIR SINE MIR 86 200 -62 209 333 51 13 chr2 182343409 182343487 -70913096 - L2 LINE L2 -39 3233 3153 429 265 63 30 chr2 182343696 182343902 -70912681 - MIR SINE MIR -36 226 16 1951 145 0 7 chr2 182344120 182344410 -70912173 - AluJb SINE Alu -22 290 3 5232 167 21 28 chr2 182344568 182344827 -70911756 + L1PA16 LINE L1 4125 4384 -1782 1966 118 13 40 chr2 182344827 182345131 -70911452 + AluSx SINE Alu 3 298 -14 5232 167 21 28 chr2 182345131 182346901 -70909682 + L1PA16 LINE L1 4384 6164 -2 513 316 54 25 chr2 182347346 182347586 -70908997 + MIR SINE MIR 6 250 -12 275 205 84 24 chr2 182348505 182348588 -70907995 - MIR SINE MIR -49 213 126 405 343 30 8 chr2 182348650 182348784 -70907799 - MIR3 SINE MIR -69 139 3 315 0 0 0 chr2 182351810 182351845 -70904738 + (CA)n Simple_repeat Simple_repeat 2 36 0 218 323 132 2 chr2 182352462 182352590 -70903993 - MIR3 SINE MIR -100 108 4 22 70 0 0 chr2 182353206 182353249 -70903334 + AT_rich Low_complexity Low_complexity 1 43 0 233 213 0 21 chr2 182353365 182353412 -70903171 - L2 LINE L2 -5 3308 3263 24 32 0 0 chr2 182353468 182353499 -70903084 + AT_rich Low_complexity Low_complexity 1 31 0 44 20 0 0 chr2 182353856 182353907 -70902676 + AT_rich Low_complexity Low_complexity 1 51 0 423 267 178 26 chr2 182353915 182354106 -70902477 + MIR SINE MIR 13 232 -30 218 273 52 52 chr2 182354181 182354258 -70902325 + L2 LINE L2 3194 3270 -2 22 56 0 0 chr2 182354887 182354923 -70901660 + AT_rich Low_complexity Low_complexity 1 36 0 2447 75 0 0 chr2 182355167 182355461 -70901122 - AluSc SINE Alu -15 294 1 2863 166 50 7 chr2 182355653 182356213 -70900370 + Charlie1 DNA MER1_type 1710 2293 -468 1346 148 117 22 chr2 182356204 182356528 -70900055 + Charlie1 DNA MER1_type 167 2759 -2 * 1714 167 26 10 chr2 182357419 182357724 -70898859 + AluJo SINE Alu 1 310 -2 285 301 48 10 chr2 182358336 182358439 -70898144 + MIR SINE MIR 153 259 -3 346 189 159 83 chr2 182358712 182358844 -70897739 - MIR3 SINE MIR -25 183 42 32 57 0 0 chr2 182359724 182359777 -70896806 + AT_rich Low_complexity Low_complexity 1 53 0 27 29 0 0 chr2 182359877 182359911 -70896672 + AT_rich Low_complexity Low_complexity 1 34 0 1988 133 0 17 chr2 182359922 182360222 -70896361 + AluSx SINE Alu 1 295 -17 466 262 26 31 chr2 182360784 182360975 -70895608 + L1ME4a LINE L1 5929 6118 -3 758 167 94 21 chr2 182362329 182362517 -70894066 + L1ME1 LINE L1 5975 6332 -2 220 283 106 44 chr2 182364616 182364729 -70891854 + L2 LINE L2 3189 3308 -5 1906 160 0 7 chr2 182364831 182365125 -70891458 + AluJb SINE Alu 1 292 -20 325 237 25 85 chr2 182365729 182365847 -70890736 - MIR SINE MIR -77 185 75 2290 102 0 3 chr2 182367692 182368006 -70888577 - AluSq SINE Alu 0 313 1 409 302 19 0 chr2 182368115 182368221 -70888362 - MIR SINE MIR -62 146 39 320 329 58 39 chr2 182368283 182368438 -70888145 - MIR3 SINE MIR -15 193 36 226 266 7 21 chr2 182368989 182369063 -70887520 - MIR SINE MIR -77 131 78 364 266 104 39 chr2 182369618 182369772 -70886811 - MIR SINE MIR -7 255 92 205 167 28 0 chr2 182370207 182370243 -70886340 + (CA)n Simple_repeat Simple_repeat 2 38 0 22 35 0 0 chr2 182371195 182371224 -70885359 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr2 182372129 182372154 -70884429 + AT_rich Low_complexity Low_complexity 1 25 0 2397 78 7 0 chr2 182373598 182373894 -70882689 + AluSp SINE Alu 2 299 -14 512 254 109 36 chr2 182374176 182374341 -70882242 + MIR SINE MIR 15 191 -71 1436 247 185 57 chr2 182375994 182376794 -70879789 + HAL1 LINE L1 338 1277 -1230 2442 58 0 13 chr2 182376794 182377102 -70879481 - AluY SINE Alu -7 304 1 1436 247 185 57 chr2 182377102 182377236 -70879347 + HAL1 LINE L1 1277 1392 -1115 378 300 116 19 chr2 182377280 182377520 -70879063 + L1ME LINE L1 5461 5727 -435 192 290 29 43 chr2 182377675 182377744 -70878839 + L2 LINE L2 3187 3254 -18 2130 87 42 0 chr2 182377837 182378124 -70878459 + AluY SINE Alu 1 299 -12 1528 143 105 0 chr2 182378331 182378589 -70877994 - AluSx SINE Alu -14 298 14 635 264 136 20 chr2 182379677 182379927 -70876656 - L1ME1 LINE L1 -5 6161 5883 687 268 105 15 chr2 182380237 182380471 -70876112 - MIR SINE MIR 0 262 9 237 375 56 14 chr2 182380684 182380828 -70875755 - L2 LINE L2 0 3272 3123 405 281 44 31 chr2 182381378 182381538 -70875045 + L1MB2 LINE L1 245 406 -5907 2168 227 68 19 chr2 182382010 182382683 -70873900 + L1MB2 LINE L1 1089 1794 -4519 228 135 0 0 chr2 182382713 182382750 -70873833 + (TG)n Simple_repeat Simple_repeat 2 38 0 12319 201 31 39 chr2 182382753 182383240 -70873343 + L1MB2 LINE L1 2207 2696 -3708 638 224 15 22 chr2 182383240 182383374 -70873209 + FLAM_A SINE Alu 1 133 0 12319 201 31 39 chr2 182383374 182383775 -70872808 + L1MB2 LINE L1 2696 3098 -3306 1561 75 0 25 chr2 182383775 182383975 -70872608 + AluY SINE Alu 90 284 -27 12319 201 31 39 chr2 182383975 182384119 -70872464 + L1MB2 LINE L1 3098 3242 -3162 2336 110 0 0 chr2 182384119 182384428 -70872155 + AluSg1 SINE Alu 1 309 0 12319 201 31 39 chr2 182384428 182385055 -70871528 + L1MB2 LINE L1 3242 3872 -2532 1351 218 52 47 chr2 182385055 182385418 -70871165 + MLT1A1 LTR MaLR 1 365 0 12319 201 31 39 chr2 182385418 182387590 -70868993 + L1MB2 LINE L1 3872 6019 -385 1450 174 36 0 chr2 182387590 182387843 -70868740 + Tigger7 DNA MER2_type 1 262 -2225 574 155 21 0 chr2 182387845 182387862 -70868721 + Tigger7 DNA MER2_type 2389 2404 -83 288 77 0 0 chr2 182387862 182387901 -70868682 + (CA)n Simple_repeat Simple_repeat 2 40 0 574 155 21 0 chr2 182387901 182387980 -70868603 + Tigger7 DNA MER2_type 2404 2487 0 1682 149 62 18 chr2 182388022 182388043 -70868540 + L1MB2 LINE L1 6013 6032 -375 243 0 0 0 chr2 182388043 182388070 -70868513 + (CA)n Simple_repeat Simple_repeat 2 28 0 1682 149 62 18 chr2 182388070 182388384 -70868199 + L1MB2 LINE L1 6032 6363 -44 207 69 0 0 chr2 182390245 182390274 -70866309 + (TG)n Simple_repeat Simple_repeat 2 30 0 544 265 50 56 chr2 182390760 182391149 -70865434 + MLT1J LTR MaLR 5 460 -51 2212 84 0 17 chr2 182391149 182391448 -70865135 + AluSc SINE Alu 1 294 -15 544 265 50 56 chr2 182391448 182391491 -70865092 + MLT1J LTR MaLR 460 502 -9 515 267 52 29 chr2 182392276 182392486 -70864097 + MER58C DNA MER1_type 1 215 0 236 205 218 0 chr2 182392801 182392879 -70863704 + MER103 DNA DNA 59 153 -13 1280 163 58 75 chr2 182393038 182393332 -70863251 + AluJo SINE Alu 1 289 -23 2270 88 3 0 chr2 182393353 182393648 -70862935 + AluSq SINE Alu 1 296 -17 25 0 0 0 chr2 182393700 182393725 -70862858 + AT_rich Low_complexity Low_complexity 1 25 0 317 277 0 24 chr2 182394416 182394499 -70862084 + L2 LINE L2 3138 3218 -54 289 229 149 47 chr2 182394783 182394997 -70861586 + L1ME4a LINE L1 5835 6070 -51 26 0 0 0 chr2 182395260 182395286 -70861297 + AT_rich Low_complexity Low_complexity 1 26 0 2248 91 13 3 chr2 182396830 182397128 -70859455 + AluSp SINE Alu 1 301 -12 2120 104 11 0 chr2 182397234 182397537 -70859046 - AluSp SINE Alu 0 306 1 328 230 150 0 chr2 182397572 182397672 -70858911 + MIR SINE MIR 74 188 -74 2300 72 24 3 chr2 182398415 182398707 -70857876 - AluY SINE Alu -13 298 1 2961 194 76 27 chr2 182398749 182399446 -70857137 + L1MB8 LINE L1 5420 6150 -28 388 257 93 14 chr2 182400473 182400687 -70855896 - L1ME4a LINE L1 0 6121 5891 260 267 114 15 chr2 182401193 182401324 -70855259 + L2 LINE L2 2644 2787 -527 199 178 44 22 chr2 182401540 182401585 -70854998 + MIR SINE MIR 208 253 -9 293 268 205 31 chr2 182402733 182402860 -70853723 - MIR SINE MIR -91 171 23 1414 66 0 0 chr2 182403598 182403781 -70852802 + AluY SINE Alu 129 311 0 310 302 22 7 chr2 182403873 182404012 -70852571 + L1MEd LINE L1 897 1037 -5082 235 428 12 0 chr2 182405194 182405360 -70851223 - L2 LINE L2 -837 2477 2310 206 274 0 16 chr2 182406778 182406840 -70849743 + (TAAA)n Simple_repeat Simple_repeat 2 62 0 829 217 54 16 chr2 182406862 182407046 -70849537 + MIR SINE MIR 2 192 -70 2229 94 10 7 chr2 182407416 182407713 -70848870 + AluSc SINE Alu 1 298 -11 621 236 139 75 chr2 182408795 182409304 -70847279 + MER34 LTR ERV1 1 542 0 1507 126 0 5 chr2 182409761 182409975 -70846608 + AluSq SINE Alu 1 213 -100 2237 109 0 3 chr2 182410004 182410298 -70846285 + AluSq SINE Alu 3 295 -18 22 35 0 0 chr2 182410357 182410386 -70846197 + AT_rich Low_complexity Low_complexity 1 29 0 30 0 0 0 chr2 182410605 182410635 -70845948 + AT_rich Low_complexity Low_complexity 1 30 0 233 257 54 0 chr2 182410800 182410874 -70845709 + L1ME LINE L1 5850 5927 -194 234 297 14 0 chr2 182411042 182411116 -70845467 + (TA)n Simple_repeat Simple_repeat 2 76 0 348 263 35 61 chr2 182411543 182411657 -70844926 + MIR3 SINE MIR 58 168 -40 523 280 85 55 chr2 182411960 182412253 -70844330 - L2 LINE L2 -7 3306 3005 3281 128 16 93 chr2 182412497 182413225 -70843358 - L1MA8 LINE L1 -10 6281 5610 199 297 47 0 chr2 182413225 182413289 -70843294 - MIR SINE MIR -132 130 64 1165 174 98 63 chr2 182413512 182413556 -70843027 + LTR37A LTR ERV1 7 48 -378 3216 117 70 12 chr2 182413556 182414053 -70842530 - MER1A DNA MER1_type 0 527 2 1165 174 98 63 chr2 182414053 182414405 -70842178 + LTR37A LTR ERV1 48 417 -9 2774 93 0 11 chr2 182414408 182414786 -70841797 - THE1C LTR MaLR -1 374 1 1493 194 20 14 chr2 182415259 182415538 -70841045 + AluJo SINE Alu 1 284 -28 216 111 0 0 chr2 182415538 182415574 -70841009 + (TTCA)n Simple_repeat Simple_repeat 4 39 0 1493 194 20 14 chr2 182415574 182415587 -70840996 + AluJo SINE Alu 284 295 -17 2471 63 3 0 chr2 182415989 182416289 -70840294 - AluY SINE Alu -10 301 1 2230 227 81 43 chr2 182416655 182417063 -70839520 + L1MEc LINE L1 1625 2016 -4199 1658 172 7 45 chr2 182417063 182417371 -70839212 + AluJo SINE Alu 3 298 -14 2230 227 81 43 chr2 182417371 182418143 -70838440 + L1MEc LINE L1 2016 2840 -3375 1617 148 92 6 chr2 182418143 182418460 -70838123 + MER7A DNA MER2_type 5 346 0 2230 227 81 43 chr2 182418460 182418881 -70837702 + L1MEc LINE L1 2840 3243 -2972 24 0 0 0 chr2 182419508 182419532 -70837051 + AT_rich Low_complexity Low_complexity 1 24 0 2006 72 4 8 chr2 182420910 182421172 -70835411 - AluY SINE Alu -6 305 45 267 291 243 31 chr2 182423261 182423742 -70832841 + L2 LINE L2 2358 2940 -374 494 232 61 12 chr2 182425192 182425356 -70831227 + MER104 DNA Tc2 6 177 -3 23 33 0 0 chr2 182425506 182425536 -70831047 + AT_rich Low_complexity Low_complexity 1 30 0 1736 142 52 0 chr2 182426257 182426525 -70830058 + AluJb SINE Alu 1 282 -30 2565 53 0 0 chr2 182427486 182427785 -70828798 - AluY SINE Alu -12 299 1 556 172 55 47 chr2 182429190 182429318 -70827265 + MLT1D LTR MaLR 1 129 -376 * 974 174 124 127 chr2 182429317 182429703 -70826880 - MLT1A1 LTR MaLR -11 385 1 1792 168 20 68 chr2 182429703 182430103 -70826480 + MLT1D LTR MaLR 125 505 0 6681 27 0 5 chr2 182430717 182431503 -70825080 + L1PA3 LINE L1 5374 6155 0 2068 130 10 13 chr2 182433096 182433230 -70823353 + AluSx SINE Alu 3 136 -176 2723 42 0 0 chr2 182433230 182433538 -70823045 + AluY SINE Alu 1 308 -3 2068 130 10 13 chr2 182433538 182433702 -70822881 + AluSx SINE Alu 136 300 -12 440 331 38 11 chr2 182434088 182434272 -70822311 + MIR3 SINE MIR 9 197 -11 2123 248 106 89 chr2 182434371 182435767 -70820816 + L1MDa LINE L1 20 1447 -5093 1774 174 3 13 chr2 182435767 182436072 -70820511 - AluJo SINE Alu -10 302 1 2123 248 106 89 chr2 182436072 182436237 -70820346 + L1MDa LINE L1 1447 1608 -4932 441 240 101 0 chr2 182436528 182436657 -70819926 - MIR SINE MIR -49 213 72 233 289 134 0 chr2 182437223 182437320 -70819263 - MIR SINE MIR 0 262 153 677 227 159 0 chr2 182437742 182437905 -70818678 + MER21B LTR ERV1 315 503 -360 777 258 46 0 chr2 182437905 182438122 -70818461 + MIR SINE MIR 28 254 -8 203 379 0 0 chr2 182438439 182438505 -70818078 - MIR SINE MIR -112 96 31 219 309 0 29 chr2 182441685 182441828 -70814755 - L2 LINE L2 -22 3291 3156 600 192 174 18 chr2 182442519 182442581 -70814002 - MER5C DNA MER1_type -70 254 203 2384 90 0 10 chr2 182442581 182442893 -70813690 + AluSq SINE Alu 3 311 -2 600 192 174 18 chr2 182442893 182443049 -70813534 - MER5C DNA MER1_type -121 203 2 603 0 0 0 chr2 182443652 182443719 -70812864 + (CA)n Simple_repeat Simple_repeat 2 68 0 201 250 29 44 chr2 182445715 182445783 -70810800 + L2 LINE L2 3246 3312 -1 246 286 27 62 chr2 182445904 182446016 -70810567 - L3 LINE CR1 -142 1435 1328 220 290 0 0 chr2 182446075 182446144 -70810439 - L3 LINE CR1 -431 1146 1078 1836 273 104 24 chr2 182446270 182447186 -70809397 + L2 LINE L2 2232 3238 -75 1869 157 28 0 chr2 182447312 182447598 -70808985 + AluJo SINE Alu 1 294 -18 2109 118 0 4 chr2 182448127 182448407 -70808176 - AluSg SINE Alu -31 279 1 652 309 118 35 chr2 182448587 182449072 -70807511 - MARNA DNA Mariner -61 525 1 23 0 0 0 chr2 182451037 182451060 -70805523 + AT_rich Low_complexity Low_complexity 1 23 0 182 354 79 8 chr2 182452162 182452289 -70804294 + MIR3 SINE MIR 9 144 -64 224 228 0 0 chr2 182453591 182453648 -70802935 + T-rich Low_complexity Low_complexity 1 57 0 21 36 0 0 chr2 182453976 182454004 -70802579 + AT_rich Low_complexity Low_complexity 1 28 0 2044 234 118 51 chr2 182454617 182455365 -70801218 + MER21B LTR ERV1 15 812 -51 1736 166 36 0 chr2 182456466 182456743 -70799840 + AluJb SINE Alu 1 287 -25 944 209 22 0 chr2 182456927 182457109 -70799474 - MER5A DNA MER1_type -3 186 1 223 285 301 0 chr2 182457114 182457237 -70799346 + MER5B DNA MER1_type 3 162 -16 2108 223 49 19 chr2 182457272 182457802 -70798781 - MER74B LTR ERVL 0 622 77 302 215 9 80 chr2 182458278 182458388 -70798195 + MER110 LTR ERV1 80 166 -302 373 276 187 4 chr2 182458428 182458674 -70797909 + MER110 LTR ERV1 166 456 -35 387 196 33 11 chr2 182458725 182458817 -70797766 - MER103 DNA DNA -9 157 64 224 219 62 0 chr2 182459732 182459796 -70796787 + GA-rich Low_complexity Low_complexity 4 71 0 4027 126 98 23 chr2 182460752 182461090 -70795493 + L1MA4 LINE L1 5475 5786 -514 2633 51 0 0 chr2 182461090 182461401 -70795182 + AluY SINE Alu 1 311 0 4027 126 98 23 chr2 182461401 182461830 -70794753 + L1MA4 LINE L1 5786 6299 -1 3860 153 78 8 chr2 182461836 182462570 -70794013 - LTR1 LTR ERV1 0 785 1 2667 155 63 70 chr2 182463712 182463870 -70792713 - L1MB4 LINE L1 -1 6179 6021 2100 115 14 3 chr2 182463870 182464166 -70792417 + AluSx SINE Alu 1 299 -13 1581 197 11 11 chr2 182464174 182464458 -70792125 + AluJb SINE Alu 5 288 -24 2667 155 63 70 chr2 182464458 182464909 -70791674 - L1MB4 LINE L1 -166 6014 5565 303 254 85 15 chr2 182465644 182465774 -70790809 - L1ME3A LINE L1 -12 6158 6020 922 292 73 24 chr2 182465906 182466331 -70790252 - L1ME3A LINE L1 -230 5940 5495 414 260 35 18 chr2 182466953 182467122 -70789461 - HAL1b LINE L1 -20 1328 1157 228 163 0 0 chr2 182467122 182467165 -70789418 + (TGGA)n Simple_repeat Simple_repeat 1 43 0 1703 175 53 66 chr2 182467426 182467821 -70788762 + MLT1B LTR MaLR 1 390 0 1491 124 18 6 chr2 182476310 182476756 -70779827 - LTR54 LTR ERV1 0 510 1 453 293 33 20 chr2 182479769 182479919 -70776664 - L2 LINE L2 0 3272 3121 754 252 36 32 chr2 182480025 182480275 -70776308 + L1ME LINE L1 5572 5822 -299 2236 115 3 10 chr2 182480280 182480592 -70775991 + AluSx SINE Alu 1 310 -2 747 233 0 19 chr2 182480618 182480777 -70775806 - FRAM SINE Alu -10 156 1 1958 258 179 21 chr2 182480901 182481221 -70775362 + L2 LINE L2 1699 1967 -1346 1541 167 4 23 chr2 182481221 182481484 -70775099 - AluJb SINE Alu -16 296 39 1958 258 179 21 chr2 182481484 182481499 -70775084 + L2 LINE L2 1967 1978 -1335 2290 114 3 0 chr2 182481499 182481806 -70774777 - AluSx SINE Alu -4 308 1 1958 258 179 21 chr2 182481806 182482739 -70773844 + L2 LINE L2 1978 3172 -141 566 181 53 4 chr2 182482761 182483281 -70773302 + (TA)n Simple_repeat Simple_repeat 1 545 0 489 250 0 44 chr2 182483290 182483450 -70773133 + L2 LINE L2 3161 3313 0 748 282 123 38 chr2 182483849 182484165 -70772418 - LTR16C LTR ERVL -89 402 60 540 291 80 62 chr2 182485131 182485567 -70771016 - MLT1J1 LTR MaLR -2 444 1 258 105 0 0 chr2 182487803 182487841 -70768742 + (TG)n Simple_repeat Simple_repeat 1 38 0 197 176 221 44 chr2 182488054 182488122 -70768461 - MIR3 SINE MIR -43 165 86 273 252 70 35 chr2 182488587 182488702 -70767881 + L2 LINE L2 3195 3313 0 1482 144 0 114 chr2 182489547 182489846 -70766737 + AluJb SINE Alu 1 265 -47 289 313 12 0 chr2 182490089 182490172 -70766411 + MIR SINE MIR 40 123 -139 3166 177 112 28 chr2 182490425 182491141 -70765442 - L1MB5 LINE L1 -6 6168 5403 270 0 0 0 chr2 182491202 182491232 -70765351 + (TG)n Simple_repeat Simple_repeat 2 31 0 1686 201 86 34 chr2 182492023 182492467 -70764116 - MLT1C LTR MaLR 0 467 1 1357 122 34 38 chr2 182492501 182492738 -70763845 - MER46A DNA MER2_type 0 236 1 2430 80 0 0 chr2 182492744 182493033 -70763550 - AluSx SINE Alu -21 291 3 530 243 119 6 chr2 182493155 182493332 -70763251 + MIR SINE MIR 66 262 0 868 111 0 16 chr2 182493716 182493842 -70762741 + FLAM_C SINE Alu 11 134 -9 290 225 34 0 chr2 182495000 182495089 -70761494 + MER102a DNA MER1_type 69 160 -170 1773 167 10 13 chr2 182495108 182495407 -70761176 - AluJo SINE Alu -13 299 2 2442 70 7 0 chr2 182495447 182495745 -70760838 + AluY SINE Alu 3 302 -9 294 258 137 42 chr2 182495745 182495935 -70760648 + MER102a DNA MER1_type 121 328 -2 2217 119 10 7 chr2 182495977 182496279 -70760304 + AluSx SINE Alu 1 303 -9 219 281 50 50 chr2 182496458 182496579 -70760004 + MER5A DNA MER1_type 44 164 -25 422 265 23 15 chr2 182497098 182497230 -70759353 - MER5B DNA MER1_type -39 139 7 199 260 221 19 chr2 182498454 182498558 -70758025 - L2 LINE L2 0 3313 3189 2130 131 3 0 chr2 182498576 182498873 -70757710 - AluJb SINE Alu -14 298 1 747 169 0 0 chr2 182498962 182499080 -70757503 - FLAM_C SINE Alu -15 118 1 2375 105 0 3 chr2 182499182 182499495 -70757088 + AluSx SINE Alu 1 312 0 186 43 0 0 chr2 182499553 182499576 -70757007 + (TTA)n Simple_repeat Simple_repeat 1 23 0 2007 161 32 16 chr2 182500563 182500942 -70755641 - MLT1B LTR MaLR 0 390 6 325 360 0 9 chr2 182502173 182502287 -70754296 - MIR3 SINE MIR -32 176 64 203 266 47 0 chr2 182502599 182502663 -70753920 + L3 LINE CR1 822 888 -689 1917 156 0 7 chr2 182503578 182503880 -70752703 - AluJb SINE Alu -4 308 9 297 295 117 72 chr2 182504063 182504230 -70752353 - MIR SINE MIR -3 205 31 346 117 0 0 chr2 182504618 182504672 -70751911 - MLT2C2 LTR ERVL 0 464 400 2508 171 53 13 chr2 182504765 182505216 -70751367 - MLT2B3 LTR ERVL -85 469 1 19139 130 33 15 chr2 182505219 182508163 -70748420 - ERVL-B3 LTR ERVL -10 5754 2756 699 154 8 0 chr2 182508192 182508309 -70748274 - MLT2B3 LTR ERVL -436 118 1 336 287 113 13 chr2 182508330 182508480 -70748103 + MIR SINE MIR 28 192 -70 960 104 0 15 chr2 182508611 182508745 -70747838 - FLAM_C SINE Alu 0 133 2 183 281 116 55 chr2 182509511 182509657 -70746926 - L2 LINE L2 -924 2390 2236 748 221 39 0 chr2 182510014 182510168 -70746415 - FRAM SINE Alu -5 161 2 484 196 13 0 chr2 182510387 182510502 -70746081 + L1MA9 LINE L1 5433 5550 -750 288 0 0 0 chr2 182510651 182510683 -70745900 + (CA)n Simple_repeat Simple_repeat 1 32 0 1135 141 12 6 chr2 182510714 182510884 -70745699 + AluSx SINE Alu 1 171 -141 3097 72 0 8 chr2 182510906 182510968 -70745615 + L1MA9 LINE L1 5650 5713 -599 3097 166 64 13 chr2 182510968 182511109 -70745474 + L1MA9 LINE L1 5650 5782 -530 279 0 0 0 chr2 182511109 182511140 -70745443 + (CA)n Simple_repeat Simple_repeat 1 31 0 3097 166 64 13 chr2 182511140 182511170 -70745413 + L1MA9 LINE L1 5782 5809 -503 1906 124 76 0 chr2 182511170 182511445 -70745138 + AluSx SINE Alu 1 296 -16 3097 166 64 13 chr2 182511445 182511899 -70744684 + L1MA9 LINE L1 5809 6308 -4 3097 72 0 8 chr2 182511899 182511919 -70744664 + L1MA9 LINE L1 5713 6308 -4 2253 101 3 0 chr2 182514588 182514875 -70741708 + AluSc SINE Alu 1 288 -21 2319 119 3 0 chr2 182515087 182515397 -70741186 - AluSp SINE Alu -2 311 1 260 385 45 41 chr2 182515793 182516014 -70740569 - L2 LINE L2 -205 3067 2846 3391 194 97 15 chr2 182516072 182516502 -70740081 + L1MB7 LINE L1 5328 5721 -463 1523 202 58 37 chr2 182516502 182516884 -70739699 - MLT1B LTR MaLR 0 390 1 3391 194 97 15 chr2 182516884 182517237 -70739346 + L1MB7 LINE L1 5721 6175 -9 1995 173 31 3 chr2 182518595 182518948 -70737635 + MER34 LTR ERV1 180 542 0 924 253 97 42 chr2 182519026 182519501 -70737082 + MER34-int LTR ERV1 72 572 -5759 277 219 0 55 chr2 182519644 182519717 -70736866 + MER34-int LTR ERV1 861 929 -5402 2318 109 0 6 chr2 182519756 182520068 -70736515 - AluSx SINE Alu -2 310 1 2435 84 7 0 chr2 182520408 182520706 -70735877 + AluSp SINE Alu 1 300 -13 607 276 117 33 chr2 182521688 182522111 -70734472 - MLT1K LTR MaLR -5 610 95 1204 304 63 32 chr2 182522425 182523026 -70733557 + L1MEc LINE L1 24 643 -5753 1153 233 59 40 chr2 182523031 182523508 -70733075 + L1MEc LINE L1 986 1471 -4925 415 211 13 0 chr2 182523554 182523630 -70732953 + Tigger5 DNA MER2_type 3 79 -2244 317 224 0 0 chr2 182523633 182523700 -70732883 - Tigger5 DNA MER2_type -7 2316 2250 488 173 0 0 chr2 182523703 182523778 -70732805 + Tigger5 DNA MER2_type 2247 2321 -2 943 216 92 126 chr2 182524208 182524773 -70731810 + MER34C LTR ERV1 40 585 0 21 0 0 0 chr2 182525020 182525041 -70731542 + AT_rich Low_complexity Low_complexity 1 21 0 4690 151 33 31 chr2 182525266 182526165 -70730418 + MER4D LTR ERV1 3 903 0 1811 173 7 23 chr2 182526383 182526576 -70730007 - AluJo SINE Alu -11 301 113 1435 146 189 110 chr2 182526576 182526943 -70729640 + MER4A LTR ERV1 1 428 -172 2519 54 0 3 chr2 182526943 182527238 -70729345 - AluY SINE Alu -17 294 1 1435 146 189 110 chr2 182527238 182527426 -70729157 + MER4A LTR ERV1 428 600 0 1811 173 7 23 chr2 182527426 182527538 -70729045 - AluJo SINE Alu -199 113 1 1459 168 78 44 chr2 182528571 182528981 -70727602 - LTR37A LTR ERV1 0 426 3 2209 133 0 0 chr2 182529476 182529776 -70726807 + AluSx SINE Alu 1 300 -12 2652 178 49 8 chr2 182530108 182530944 -70725639 + MER54A LTR ERVL 1 901 0 2236 90 0 13 chr2 182530949 182531248 -70725335 - AluY SINE Alu -16 295 1 1065 281 73 40 chr2 182531668 182532288 -70724295 - L2 LINE L2 0 3313 2657 293 306 24 0 chr2 182532338 182532423 -70724160 - MLT1J1 LTR MaLR -7 439 353 2233 111 143 8 chr2 182532756 182533133 -70723450 + MSTA LTR MaLR 1 428 0 525 223 82 92 chr2 182533170 182533452 -70723131 - L2 LINE L2 -853 2461 2183 361 248 70 23 chr2 182533566 182533695 -70722888 + MIR SINE MIR 118 252 -10 1608 172 57 62 chr2 182534159 182534548 -70722035 + MLT1B LTR MaLR 1 387 -3 383 258 109 16 chr2 182534634 182534762 -70721821 - MIR SINE MIR -72 190 51 207 388 12 0 chr2 182535836 182535921 -70720662 - L2 LINE L2 0 3272 3187 183 129 0 0 chr2 182537230 182537261 -70719322 + (TG)n Simple_repeat Simple_repeat 2 32 0 334 161 0 32 chr2 182538224 182538286 -70718297 + MLT2D LTR ERVL 355 414 0 22 35 0 0 chr2 182538366 182538395 -70718188 + AT_rich Low_complexity Low_complexity 1 29 0 1983 159 31 6 chr2 182538528 182538880 -70717703 + MER46B DNA MER2_type 1 236 0 317 349 0 16 chr2 182539445 182539571 -70717012 - LTR33 LTR ERVL -383 138 15 944 114 6 36 chr2 182539575 182539741 -70716842 - AluSx SINE Alu -151 161 1 1075 188 163 0 chr2 182540327 182540604 -70715979 - L1ME2 LINE L1 -152 6012 5691 5711 60 11 7 chr2 182540605 182541325 -70715258 - SVA Other Other 0 1386 664 201 271 0 17 chr2 182541427 182541486 -70715097 + CT-rich Low_complexity Low_complexity 4 61 0 231 348 0 30 chr2 182541626 182541761 -70714822 + CT-rich Low_complexity Low_complexity 4 134 0 1915 284 194 16 chr2 182541873 182542623 -70713960 - L2 LINE L2 -1114 2200 1239 3782 104 0 35 chr2 182542623 182543169 -70713414 - MER1A DNA MER1_type 0 527 1 1915 284 194 16 chr2 182543169 182543381 -70713202 - L2 LINE L2 -2075 1239 1066 334 353 119 16 chr2 182543404 182543775 -70712808 + L2 LINE L2 2473 2881 -433 239 272 149 9 chr2 182543857 182543971 -70712612 + L2 LINE L2 3184 3313 0 1699 159 7 30 chr2 182544259 182544555 -70712028 + AluJo SINE Alu 1 289 -23 208 244 0 0 chr2 182545107 182545148 -70711435 + (CATA)n Simple_repeat Simple_repeat 3 43 0 21 36 0 0 chr2 182546095 182546123 -70710460 + AT_rich Low_complexity Low_complexity 1 28 0 2059 209 19 19 chr2 182546197 182546623 -70709960 + MSTB LTR MaLR 1 426 0 513 143 0 24 chr2 182546669 182546753 -70709830 - FRAM/FAM SINE Alu -98 87 6 36 62 0 0 chr2 182547464 182547528 -70709055 + AT_rich Low_complexity Low_complexity 1 64 0 2027 142 3 3 chr2 182548633 182548943 -70707640 - AluSg SINE Alu 0 310 1 2483 254 82 36 chr2 182548997 182549999 -70706584 - L1MC4 LINE L1 -292 7750 6703 230 291 114 23 chr2 182550013 182550188 -70706395 - L1MC4 LINE L1 -1435 6607 6417 520 163 33 0 chr2 182550351 182550443 -70706140 - BC200 scRNA scRNA -62 138 44 4066 130 44 2 chr2 182550513 182551362 -70705221 + L1MA5 LINE L1 5371 6297 -3 1902 158 3 3 chr2 182551384 182551712 -70704871 + AluJb SINE Alu 1 328 0 341 210 58 117 chr2 182551735 182551799 -70704784 - L1MC4a LINE L1 -1549 6259 6193 294 29 0 0 chr2 182551799 182551834 -70704749 + (TG)n Simple_repeat Simple_repeat 2 36 0 2301 103 0 0 chr2 182551839 182552141 -70704442 - AluSg SINE Alu -8 302 1 341 210 58 117 chr2 182552141 182552275 -70704308 - L1MC4a LINE L1 -1619 6189 6067 634 215 23 0 chr2 182552443 182552573 -70704010 - BC200 scRNA scRNA -67 133 1 1664 216 160 11 chr2 182552577 182553132 -70703451 - L1MC4a LINE L1 -1854 5954 5317 225 178 0 0 chr2 182554526 182554571 -70702012 + (TG)n Simple_repeat Simple_repeat 2 46 0 657 262 148 22 chr2 182554655 182554884 -70701699 + MIR SINE MIR 5 262 0 851 93 54 23 chr2 182555398 182555527 -70701056 + FLAM_C SINE Alu 1 133 0 286 148 99 25 chr2 182555932 182556013 -70700570 - MER113 DNA MER1_type? -80 441 355 2030 141 3 7 chr2 182556091 182556395 -70700188 - AluJb SINE Alu -4 308 6 555 324 80 23 chr2 182556728 182557027 -70699556 + MER102b DNA MER1_type 1 316 -25 366 161 11 54 chr2 182557973 182558066 -70698517 - AluJo/FRAM SINE Alu -44 258 170 978 185 14 46 chr2 182558066 182558282 -70698301 - AluJo SINE Alu -103 209 1 1298 175 75 22 chr2 182558596 182558864 -70697719 + AluJb SINE Alu 1 282 -30 1714 118 31 38 chr2 182558868 182559155 -70697428 - AluSq SINE Alu -5 308 24 2377 86 3 0 chr2 182559394 182559695 -70696888 - AluSx SINE Alu -10 302 1 259 277 31 0 chr2 182560883 182560948 -70695635 - L2 LINE L2 0 3313 3247 5045 173 12 13 chr2 182562058 182563703 -70692880 + L1PB1 LINE L1 4150 5790 -361 553 167 11 0 chr2 182563704 182563878 -70692705 + (TA)n Simple_repeat Simple_repeat 1 176 0 2371 93 24 37 chr2 182563878 182564253 -70692330 + L1PB1 LINE L1 5782 6151 0 2055 152 45 8 chr2 182564287 182564669 -70691914 + L1PA16 LINE L1 5769 6164 -2 837 217 259 10 chr2 182564677 182565060 -70691523 + L1MCa LINE L1 1451 1928 -4498 2057 119 3 7 chr2 182565105 182565407 -70691176 + AluSx SINE Alu 1 301 -11 2858 176 7 41 chr2 182565468 182566035 -70690548 + MER82 DNA MER2_type 8 555 -98 386 286 18 71 chr2 182566480 182566648 -70689935 + MER77 LTR ERV1 234 392 -213 558 104 0 0 chr2 182566654 182566731 -70689852 + FLAM_A SINE Alu 22 98 -44 365 143 0 26 chr2 182566731 182566808 -70689775 + (GGAA)n Simple_repeat Simple_repeat 4 78 0 705 220 46 26 chr2 182566823 182567045 -70689538 + MER77 LTR ERV1 380 604 -1 405 249 85 90 chr2 182567245 182567422 -70689161 + MIR SINE MIR 74 249 -13 23 54 0 0 chr2 182567659 182567696 -70688887 + AT_rich Low_complexity Low_complexity 1 37 0 249 271 14 14 chr2 182567764 182567834 -70688749 + L1ME LINE L1 5532 5604 -566 346 328 23 12 chr2 182568792 182568963 -70687620 + L1ME LINE L1 5610 5782 -339 227 236 393 0 chr2 182569080 182569169 -70687414 - Charlie1b DNA MER1_type 0 523 400 2054 100 68 0 chr2 182569177 182569458 -70687125 + AluSg SINE Alu 1 300 -10 1494 188 4 8 chr2 182569461 182569727 -70686856 + AluJb SINE Alu 1 265 -47 607 108 0 43 chr2 182569732 182569871 -70686712 + (GGGA)n Simple_repeat Simple_repeat 2 134 0 2373 79 3 16 chr2 182569921 182570237 -70686346 + AluSp SINE Alu 1 312 -1 1300 157 214 10 chr2 182570246 182570545 -70686038 - Charlie1b DNA MER1_type -157 366 7 2386 84 0 0 chr2 182570621 182570929 -70685654 + AluSg SINE Alu 1 308 -2 2058 103 21 0 chr2 182571231 182571280 -70685303 + AluSx SINE Alu 1 47 -265 180 0 0 0 chr2 182571280 182571300 -70685283 + (G)n Simple_repeat Simple_repeat 1 20 0 2058 103 21 0 chr2 182571300 182571532 -70685051 + AluSx SINE Alu 47 288 -24 22 35 0 0 chr2 182571661 182571690 -70684893 + AT_rich Low_complexity Low_complexity 1 29 0 185 364 27 58 chr2 182571969 182572194 -70684389 - L2 LINE L2 -189 3083 2866 601 232 92 5 chr2 182572792 182572977 -70683606 - MER105 DNA DNA -1 203 3 1703 146 3 41 chr2 182575679 182575974 -70680609 + AluJb SINE Alu 1 284 -28 207 0 0 0 chr2 182575974 182575997 -70680586 + (TTAAA)n Simple_repeat Simple_repeat 3 25 0 267 237 204 0 chr2 182577393 182577486 -70679097 + MER46C DNA MER2_type 2 113 -225 1016 208 56 20 chr2 182577514 182577764 -70678819 + MER46C DNA MER2_type 80 338 0 536 234 0 0 chr2 182577787 182577898 -70678685 + L2 LINE L2 2692 2802 -512 232 280 235 0 chr2 182577914 182578046 -70678537 + MER5A DNA MER1_type 27 189 0 * 852 264 145 51 chr2 182578046 182578467 -70678116 + L2 LINE L2 2793 3257 -56 5773 191 66 19 chr2 182578467 182579655 -70676928 + Charlie1a DNA MER1_type 1 1266 -1495 2421 59 0 7 chr2 182579655 182579945 -70676638 + AluY SINE Alu 3 290 -21 5773 191 66 19 chr2 182579945 182580145 -70676438 + Charlie1a DNA MER1_type 1266 1455 0 852 264 145 51 chr2 182580145 182580173 -70676410 + L2 LINE L2 3257 3281 -32 562 314 96 13 chr2 182580168 182580397 -70676186 - MIR SINE MIR 0 262 15 * 199 263 121 71 chr2 182582310 182582409 -70674174 + MIR SINE MIR 2 105 -157 351 0 0 0 chr2 182583515 182583554 -70673029 + (CA)n Simple_repeat Simple_repeat 2 40 0 513 293 68 15 chr2 182583908 182584171 -70672412 - L1MC4 LINE L1 0 8042 7766 290 203 47 0 chr2 182584171 182584235 -70672348 - Looper DNA T2_type 0 1558 1492 1284 123 42 74 chr2 182584277 182584467 -70672116 + Looper DNA T2_type 1193 1371 -187 2348 62 3 23 chr2 182584467 182584771 -70671812 + AluY SINE Alu 12 309 -2 1284 123 42 74 chr2 182584771 182584889 -70671694 + Looper DNA T2_type 1371 1491 -67 2037 73 4 4 chr2 182584894 182585154 -70671429 - AluSq SINE Alu -53 260 1 240 154 0 0 chr2 182585155 182585194 -70671389 - Looper DNA T2_type -351 1207 1169 2670 160 36 8 chr2 182585197 182585697 -70670886 - Looper DNA T2_type -304 1254 741 605 193 60 7 chr2 182585707 182585857 -70670726 - MER58B DNA MER1_type -4 337 180 2329 164 82 93 chr2 182585881 182586419 -70670164 - Looper DNA T2_type -816 742 213 631 101 11 0 chr2 182586419 182586508 -70670075 + HY4 scRNA scRNA 1 90 -3 2329 164 82 93 chr2 182586508 182586712 -70669871 - Looper DNA T2_type -1345 213 8 606 198 14 78 chr2 182586775 182586992 -70669591 - L1MC4 LINE L1 -364 7678 7476 670 198 16 0 chr2 182587006 182587132 -70669451 - MER45A DNA AcHobo -50 128 1 576 160 0 9 chr2 182587213 182587319 -70669264 - Looper DNA T2_type -286 1272 1168 249 358 136 6 chr2 182587563 182587725 -70668858 - L2 LINE L2 0 3272 3090 998 68 0 0 chr2 182588149 182588267 -70668316 + AluSc SINE Alu 1 118 -191 1810 100 0 0 chr2 182588267 182588526 -70668057 + AluSc SINE Alu 51 309 0 21 0 0 0 chr2 182589813 182589834 -70666749 + AT_rich Low_complexity Low_complexity 1 21 0 6490 24 0 1 chr2 182590412 182591165 -70665418 - L1PA4 LINE L1 0 6155 5404 30 27 0 0 chr2 182591440 182591477 -70665106 + AT_rich Low_complexity Low_complexity 1 37 0 451 207 69 99 chr2 182591626 182591858 -70664725 + L1ME3A LINE L1 5934 6158 -12 2184 103 0 0 chr2 182592164 182592472 -70664111 + AluSg SINE Alu 1 308 0 2367 97 0 0 chr2 182592983 182593283 -70663300 - AluSc SINE Alu -9 300 1 1959 148 48 62 chr2 182595153 182595348 -70661235 + Tigger2a DNA MER2_type 1 197 -2511 2291 99 0 0 chr2 182595348 182595652 -70660931 - AluY SINE Alu -7 304 1 1959 148 48 62 chr2 182595652 182595895 -70660688 + Tigger2a DNA MER2_type 197 433 -1 2076 108 0 84 chr2 182596016 182596349 -70660234 - AluSg SINE Alu -4 306 2 2537 34 7 0 chr2 182596694 182596990 -70659593 + AluY SINE Alu 1 298 -13 21 0 0 0 chr2 182597393 182597414 -70659169 + AT_rich Low_complexity Low_complexity 1 21 0 2245 99 10 0 chr2 182597712 182598015 -70658568 + AluSq SINE Alu 1 306 -7 1686 155 0 63 chr2 182598104 182598420 -70658163 + AluJo SINE Alu 1 296 -16 382 49 33 0 chr2 182598819 182598880 -70657703 + (TG)n Simple_repeat Simple_repeat 1 63 0 225 0 0 0 chr2 182598879 182598904 -70657679 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 377 288 36 65 chr2 182600440 182600579 -70656004 - L2 LINE L2 -1 3271 3137 2059 182 16 62 chr2 182601252 182601421 -70655162 + MER31B LTR ERV1 1 176 -290 1509 151 67 32 chr2 182601421 182601706 -70654877 - AluJo SINE Alu -17 295 1 2059 182 16 62 chr2 182601706 182602024 -70654559 + MER31B LTR ERV1 176 466 0 393 317 116 36 chr2 182603054 182603569 -70653014 - L2 LINE L2 -16 3256 2696 191 207 0 0 chr2 182603748 182603777 -70652806 - L2 LINE L2 -23 3290 3262 2680 157 14 42 chr2 182603840 182604008 -70652575 + MER44D DNA MER2_type 12 183 -2304 2058 121 8 59 chr2 182604008 182604363 -70652220 - MER1B DNA MER1_type 0 337 1 2680 157 14 42 chr2 182604363 182604748 -70651835 + MER44D DNA MER2_type 183 605 0 198 348 56 56 chr2 182605086 182605247 -70651336 - MIR3 SINE MIR -32 176 16 605 255 98 38 chr2 182605270 182605763 -70650820 + L2 LINE L2 2739 3310 -3 1568 97 166 35 chr2 182606366 182606625 -70649958 + AluSg1 SINE Alu 1 293 -16 2230 129 0 0 chr2 182606637 182606939 -70649644 + AluSx SINE Alu 1 302 -10 535 96 10 67 chr2 182607508 182607612 -70648971 - L1MB7 LINE L1 0 6184 6087 21 0 0 0 chr2 182607773 182607794 -70648789 + AT_rich Low_complexity Low_complexity 1 21 0 409 203 80 0 chr2 182608310 182608448 -70648135 + MER106B DNA MER1_type 906 1054 -5 2088 141 13 3 chr2 182608754 182609053 -70647530 - AluSx SINE Alu -10 302 1 2078 149 0 0 chr2 182609056 182609357 -70647226 - AluSx SINE Alu -9 303 3 717 134 0 106 chr2 182609373 182609515 -70647068 - FLAM_C SINE Alu -16 127 1 1008 182 0 33 chr2 182609518 182609699 -70646884 - FAM SINE Alu 0 175 1 265 283 257 13 chr2 182611624 182611776 -70644807 - MER5A DNA MER1_type 0 189 1 406 289 74 7 chr2 182612347 182612482 -70644101 + MIR3 SINE MIR 11 154 -54 326 316 100 87 chr2 182613297 182613879 -70642704 + L1M2 LINE L1 530 1124 -5725 186 43 0 0 chr2 182613879 182613902 -70642681 + (CGG)n Simple_repeat Simple_repeat 2 24 0 326 316 100 87 chr2 182613902 182614018 -70642565 + L1M2 LINE L1 1124 1237 -5612 201 152 0 0 chr2 182616447 182616480 -70640103 + (CA)n Simple_repeat Simple_repeat 2 34 0 388 291 8 45 chr2 182616932 182617066 -70639517 + MIR3 SINE MIR 70 198 -10 1874 159 3 3 chr2 182617812 182618108 -70638475 - AluJo SINE Alu -16 296 1 2086 102 20 14 chr2 182618123 182618417 -70638166 - AluSx SINE Alu -11 301 6 309 26 0 0 chr2 182619023 182619061 -70637522 + (TG)n Simple_repeat Simple_repeat 1 38 0 327 333 0 0 chr2 182619981 182620071 -70636512 - L2 LINE L2 -1 3312 3223 252 0 0 0 chr2 182620632 182620660 -70635923 + (CA)n Simple_repeat Simple_repeat 2 29 0 399 300 20 0 chr2 182620784 182620884 -70635699 + MIR SINE MIR 47 148 -114 535 255 77 95 chr2 182620889 182621463 -70635120 - MLT1K LTR MaLR 0 588 5 989 146 0 0 chr2 182621594 182621738 -70634845 - FRAM SINE Alu -3 173 30 2364 114 33 11 chr2 182623116 182623483 -70633100 - THE1C LTR MaLR 0 375 1 452 32 16 0 chr2 182624775 182624837 -70631746 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 2661 132 39 5 chr2 182625396 182625806 -70630777 + MSTB LTR MaLR 1 424 -2 8320 175 55 6 chr2 182625806 182627378 -70629205 + MSTB-int LTR MaLR 2 1651 0 2177 129 40 16 chr2 182627378 182627750 -70628833 + MSTB LTR MaLR 1 381 -45 244 260 0 40 chr2 182627977 182628077 -70628506 - L1ME4a LINE L1 -61 6060 5965 702 306 109 28 chr2 182628462 182628858 -70627725 + LTR16A LTR ERVL 17 444 -6 2190 118 3 0 chr2 182628959 182629255 -70627328 + AluSp SINE Alu 1 297 -16 237 279 16 0 chr2 182629280 182629341 -70627242 + MLT1K LTR MaLR 527 588 0 374 304 33 6 chr2 182629341 182629522 -70627061 - L1ME4a LINE L1 -459 5662 5477 1179 259 73 60 chr2 182629530 182630154 -70626429 - L2 LINE L2 -5 3308 2660 2198 124 3 0 chr2 182630154 182630461 -70626122 + AluSx SINE Alu 4 311 -1 2009 150 45 3 chr2 182630466 182630800 -70625783 - MER7A DNA MER2_type 0 346 1 562 200 9 0 chr2 182630829 182630934 -70625649 + U6 snRNA snRNA 1 106 -1 314 293 82 20 chr2 182631041 182631188 -70625395 - L1ME4a LINE L1 -758 5388 5233 564 146 32 0 chr2 182632361 182632542 -70624041 + L1MA9 LINE L1 6008 6290 -22 217 174 0 22 chr2 182632593 182632639 -70623944 + A-rich Low_complexity Low_complexity 1 45 0 3030 214 16 25 chr2 182633372 182633508 -70623075 - L1ME1 LINE L1 -5 6161 6025 2405 95 0 0 chr2 182633508 182633812 -70622771 - AluSx SINE Alu -8 304 1 3030 214 16 25 chr2 182633812 182634410 -70622173 - L1ME1 LINE L1 -141 6025 5433 252 254 0 0 chr2 182634688 182634755 -70621828 + MLT1K LTR MaLR 505 571 -17 229 299 45 0 chr2 182634781 182634848 -70621735 + L2 LINE L2 3184 3253 -19 1719 180 0 7 chr2 182634883 182635218 -70621365 + AluJb SINE Alu 1 333 0 190 292 0 0 chr2 182635218 182635266 -70621317 + L3 LINE CR1 672 719 -858 957 218 44 26 chr2 182635278 182635507 -70621076 + MIR SINE MIR 9 241 -21 2437 83 3 0 chr2 182635539 182635840 -70620743 - AluSp SINE Alu -11 302 1 21 36 0 0 chr2 182636103 182636131 -70620452 + AT_rich Low_complexity Low_complexity 1 28 0 503 343 162 18 chr2 182636131 182636519 -70620064 + L3 LINE CR1 871 1314 -263 2145 118 10 0 chr2 182637483 182637772 -70618811 + AluSx SINE Alu 1 292 -20 272 113 0 19 chr2 182637889 182637942 -70618641 - L1ME4a LINE L1 -2 6119 6068 681 130 0 19 chr2 182638384 182638492 -70618091 + U6 snRNA snRNA 1 106 -1 25 0 0 0 chr2 182638498 182638523 -70618060 + AT_rich Low_complexity Low_complexity 1 25 0 413 224 0 6 chr2 182638598 182638714 -70617869 + MER5A DNA MER1_type 5 189 0 389 248 18 0 chr2 182638787 182638900 -70617683 + L1ME3 LINE L1 6048 6162 0 2169 103 0 0 chr2 182640386 182640696 -70615887 + AluSg1 SINE Alu 1 310 0 22 0 0 0 chr2 182641075 182641097 -70615486 + AT_rich Low_complexity Low_complexity 1 22 0 5036 140 43 10 chr2 182641097 182642224 -70614359 - L1PA16 LINE L1 -14 6152 4992 854 138 28 0 chr2 182642244 182642389 -70614194 - L1MA3 LINE L1 0 6305 6157 723 40 10 0 chr2 182642853 182642953 -70613630 - L1M1 LINE L1 -4865 2700 2600 276 165 0 139 chr2 182642984 182643063 -70613520 + SATR1 Satellite Satellite 190 257 -213 418 95 0 0 chr2 182643070 182643133 -70613450 - L1M1 LINE L1 -4957 2608 2546 968 193 311 3 chr2 182643134 182643512 -70613071 + SATR1 Satellite Satellite 1 494 -104 479 327 0 6 chr2 182643953 182644109 -70612474 + MIR SINE MIR 80 234 -28 318 316 247 25 chr2 182644271 182644948 -70611635 - L2 LINE L2 -1108 2206 1380 21 57 0 0 chr2 182645863 182645898 -70610685 + AT_rich Low_complexity Low_complexity 1 35 0 368 260 31 0 chr2 182645969 182646065 -70610518 + MIR SINE MIR 47 145 -63 2100 125 10 0 chr2 182646088 182646385 -70610198 + AluSx SINE Alu 1 300 -12 687 263 42 51 chr2 182646486 182646703 -70609880 + LTR33 LTR ERVL 1 215 -306 319 195 58 11 chr2 182646840 182646927 -70609656 + LTR33 LTR ERVL 415 505 -16 2326 113 0 0 chr2 182647156 182647467 -70609116 - AluSx SINE Alu -1 311 1 203 175 0 0 chr2 182648593 182648633 -70607950 + A-rich Low_complexity Low_complexity 1 40 0 1936 155 121 16 chr2 182648923 182649310 -70607273 + MSTA LTR MaLR 1 428 0 2016 141 3 7 chr2 182649436 182649740 -70606843 + AluSx SINE Alu 1 303 -9 411 308 63 46 chr2 182649906 182650143 -70606440 - L1M4 LINE L1 -3709 2437 2197 333 307 130 28 chr2 182650356 182650571 -70606012 - L2 LINE L2 -973 2341 2105 700 209 0 0 chr2 182650583 182650712 -70605871 + FLAM_C SINE Alu 2 130 -3 231 36 0 0 chr2 182650712 182650740 -70605843 + (TA)n Simple_repeat Simple_repeat 2 29 0 14645 108 27 2 chr2 182650760 182653794 -70602789 - L1PA8A LINE L1 -28 6103 2995 3277 122 45 20 chr2 182653802 182654400 -70602183 - L1MA6 LINE L1 -282 7437 6825 1417 190 33 0 chr2 182654400 182654642 -70601941 - AluJb SINE Alu -62 250 1 360 181 0 0 chr2 182654642 182654714 -70601869 - L1MA6 LINE L1 -942 6623 6552 * 6170 223 44 33 chr2 182654700 182654715 -70601868 - L1MA6 LINE L1 -2340 5225 5212 2132 141 0 0 chr2 182654715 182655027 -70601556 - AluSx SINE Alu 0 312 1 6170 223 44 33 chr2 182655027 182655790 -70600793 - L1MA6 LINE L1 -2353 5212 4459 2087 126 7 3 chr2 182655790 182656084 -70600499 + AluSx SINE Alu 1 295 -17 6170 223 44 33 chr2 182656084 182657718 -70598865 - L1MA6 LINE L1 -3106 4459 2785 802 81 0 0 chr2 182657738 182657857 -70598726 + AluSg/x SINE Alu 183 301 0 1058 270 128 31 chr2 182657857 182658302 -70598281 - L1MA6 LINE L1 -6300 1266 779 428 299 107 27 chr2 182658337 182658598 -70597985 - MLT1J LTR MaLR -122 389 108 791 224 216 17 chr2 182658612 182658702 -70597881 + LTR50 LTR ERVL 1 72 -723 2090 153 47 40 chr2 182658702 182658975 -70597608 - Tigger2a DNA MER2_type -2274 434 155 2360 84 7 0 chr2 182658975 182659272 -70597311 - AluSx SINE Alu -13 299 1 2090 153 47 40 chr2 182659272 182659428 -70597155 - Tigger2a DNA MER2_type -2553 155 2 791 224 216 17 chr2 182659428 182659616 -70596967 + LTR50 LTR ERVL 72 221 -574 1764 138 80 7 chr2 182659616 182659891 -70596692 - AluJo SINE Alu -17 295 1 791 224 216 17 chr2 182659891 182660101 -70596482 + LTR50 LTR ERVL 221 684 -111 1532 233 63 9 chr2 182660165 182660737 -70595846 - Zaphod DNA AcHobo -3291 740 109 229 273 45 0 chr2 182660720 182660786 -70595797 - MER115 DNA AcHobo -616 77 9 * 27 29 0 0 chr2 182662032 182662066 -70594517 + AT_rich Low_complexity Low_complexity 1 34 0 1604 97 0 34 chr2 182662807 182663044 -70593539 - AluY SINE Alu 0 311 83 405 298 57 60 chr2 182663089 182663458 -70593125 - L1ME LINE L1 -524 6433 6066 943 270 89 27 chr2 182663490 182663742 -70592841 - L1MCa LINE L1 -4569 2553 2318 288 0 0 0 chr2 182663742 182663774 -70592809 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 2218 83 0 0 chr2 182663778 182664056 -70592527 - AluSc SINE Alu -31 278 1 943 270 89 27 chr2 182664056 182664082 -70592501 - L1MCa LINE L1 -4806 2316 2293 2277 128 0 0 chr2 182664082 182664394 -70592189 - AluSx SINE Alu 0 312 1 943 270 89 27 chr2 182664394 182665042 -70591541 - L1MCa LINE L1 -4829 2293 1355 2307 89 3 0 chr2 182665136 182665428 -70591155 - AluSg SINE Alu -17 293 1 1492 163 133 0 chr2 182665431 182665695 -70590888 - AluJb SINE Alu -2 300 2 1388 231 35 65 chr2 182665710 182666190 -70590393 + MER74B LTR ERVL 69 534 -88 1142 245 120 11 chr2 182666279 182666720 -70589863 - L1MCa LINE L1 -5127 1296 808 536 293 112 54 chr2 182666808 182667344 -70589239 - L1MCa LINE L1 -5824 599 33 473 343 21 4 chr2 182667356 182667589 -70588994 - L1M4 LINE L1 -876 5270 5034 2159 226 74 41 chr2 182667674 182668307 -70588276 + MLT1E1 LTR MaLR 1 654 0 418 244 177 58 chr2 182668397 182668549 -70588034 - L1M4 LINE L1 -1293 4853 4720 2314 102 0 0 chr2 182668549 182668854 -70587729 - AluSx SINE Alu -7 305 1 418 244 177 58 chr2 182668854 182669148 -70587435 - L1M4 LINE L1 -1426 4720 4354 420 229 134 10 chr2 182669234 182669467 -70587116 - L1MD3 LINE L1 0 8042 7788 521 286 165 12 chr2 182669476 182669736 -70586847 + L1ME LINE L1 36 363 -6033 1854 161 87 77 chr2 182669736 182670232 -70586351 + MLT1D LTR MaLR 5 505 0 521 286 165 12 chr2 182670232 182670317 -70586266 + L1ME LINE L1 363 434 -5962 587 213 93 11 chr2 182670442 182670625 -70585958 + L1ME LINE L1 3626 3823 -2392 * 1321 205 30 3 chr2 182670620 182670917 -70585666 + L1ME LINE L1 5580 5884 -351 317 315 119 40 chr2 182670948 182671250 -70585333 - L1M4 LINE L1 -2464 3682 3357 25 0 0 0 chr2 182671312 182671337 -70585246 + AT_rich Low_complexity Low_complexity 1 25 0 2297 156 174 60 chr2 182671349 182671899 -70584684 - LTR18B LTR ERVL 0 614 2 1647 193 15 0 chr2 182671899 182672173 -70584410 - AluJo SINE Alu -33 279 2 1864 109 106 0 chr2 182672923 182673188 -70583395 + AluSx SINE Alu 1 293 -19 434 167 42 67 chr2 182673322 182673442 -70583141 + L1MA2 LINE L1 17 133 -7432 * 11660 154 31 17 chr2 182673441 182678466 -70578117 + L1MA2 LINE L1 346 7717 -6 345 303 43 64 chr2 182679850 182680038 -70576545 + L2 LINE L2 3120 3303 -10 1760 250 56 51 chr2 182680047 182680690 -70575893 - L2 LINE L2 -465 2849 2204 38 51 0 0 chr2 182681369 182681428 -70575155 + AT_rich Low_complexity Low_complexity 1 59 0 22 70 0 0 chr2 182681775 182681818 -70574765 + AT_rich Low_complexity Low_complexity 1 43 0 264 100 0 0 chr2 182682074 182682114 -70574469 + (CA)n Simple_repeat Simple_repeat 2 41 0 28 29 0 0 chr2 182682984 182683019 -70573564 + AT_rich Low_complexity Low_complexity 1 35 0 281 302 0 0 chr2 182684453 182684549 -70572034 - L1ME3A LINE L1 -208 5962 5867 21 0 0 0 chr2 182684761 182684782 -70571801 + AT_rich Low_complexity Low_complexity 1 21 0 738 212 0 0 chr2 182685034 182685185 -70571398 - L1PA16 LINE L1 -20 6146 5996 31 58 0 0 chr2 182685361 182685413 -70571170 + AT_rich Low_complexity Low_complexity 1 52 0 5878 32 0 0 chr2 182685425 182686111 -70570472 - L1PA4 LINE L1 -13 6142 5457 1853 147 13 20 chr2 182686587 182686887 -70569696 - AluJo SINE Alu -14 298 1 446 180 67 11 chr2 182687115 182687204 -70569379 + MER81 DNA DNA 1 94 -20 2034 118 0 24 chr2 182690389 182690685 -70565898 + AluSx SINE Alu 6 294 -18 233 180 100 0 chr2 182691340 182691390 -70565193 + MER116 DNA Mariner 1 55 -25 8332 27 3 2 chr2 182691505 182693272 -70563311 + L1PA3 LINE L1 4384 6154 -1 319 385 74 0 chr2 182693376 182693498 -70563085 + L2 LINE L2 3102 3232 -40 1876 135 55 3 chr2 182693870 182694159 -70562424 + AluSx SINE Alu 3 306 -6 420 20 0 0 chr2 182694165 182694214 -70562369 + (CA)n Simple_repeat Simple_repeat 2 50 0 887 129 0 0 chr2 182695200 182695324 -70561259 - AluSq/x SINE Alu -188 124 1 24 0 0 0 chr2 182696398 182696422 -70560161 + AT_rich Low_complexity Low_complexity 1 24 0 260 325 117 0 chr2 182696516 182696636 -70559947 + L2 LINE L2 3159 3292 -21 370 111 0 192 chr2 182697168 182697267 -70559316 - MADE1 DNA Mariner 0 80 1 2262 92 7 0 chr2 182697515 182697808 -70558775 + AluSp SINE Alu 1 295 -18 1955 160 102 5 chr2 182698646 182698805 -70557778 - L1MB5 LINE L1 -12 6162 6004 639 280 43 36 chr2 182698805 182699084 -70557499 - L1MD2 LINE L1 -385 5974 5694 206 339 144 8 chr2 182699839 182699957 -70556626 - MIR SINE MIR -62 200 67 26 30 0 0 chr2 182700025 182700058 -70556525 + AT_rich Low_complexity Low_complexity 1 33 0 2229 99 3 0 chr2 182700197 182700491 -70556092 + AluSx SINE Alu 1 295 -17 24 0 0 0 chr2 182700705 182700729 -70555854 + AT_rich Low_complexity Low_complexity 1 24 0 21 71 0 0 chr2 182701255 182701297 -70555286 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr2 182701366 182701387 -70555196 + AT_rich Low_complexity Low_complexity 1 21 0 2196 107 0 16 chr2 182702726 182703043 -70553540 + AluSx SINE Alu 1 312 0 23 0 0 0 chr2 182703145 182703168 -70553415 + AT_rich Low_complexity Low_complexity 1 23 0 1207 174 5 14 chr2 182703360 182703567 -70553016 + AluJb SINE Alu 88 292 -20 2101 83 28 7 chr2 182703708 182703996 -70552587 - AluSx SINE Alu -7 305 12 352 218 129 0 chr2 182704275 182704376 -70552207 - L2 LINE L2 -44 3269 3156 363 267 11 11 chr2 182704445 182704535 -70552048 - MER58 DNA MER1_type -113 102 13 186 280 96 64 chr2 182706715 182706840 -70549743 + L2 LINE L2 3179 3307 -6 1227 215 66 37 chr2 182707650 182707714 -70548869 - L1ME1 LINE L1 -2 6164 6103 2113 122 7 0 chr2 182707714 182708018 -70548565 - AluSx SINE Alu -6 306 1 1227 215 66 37 chr2 182708018 182708330 -70548253 - L1ME1 LINE L1 -63 6103 5777 196 245 163 38 chr2 182708330 182708432 -70548151 - MIR SINE MIR -65 143 32 418 283 110 7 chr2 182708736 182708881 -70547702 + MIR SINE MIR 49 208 -54 4872 29 7 8 chr2 182709071 182709663 -70546920 + LTR10C LTR ERV1 1 591 0 22 0 0 0 chr2 182709975 182709997 -70546586 + AT_rich Low_complexity Low_complexity 1 22 0 438 295 114 0 chr2 182710737 182710886 -70545697 - MIR3 SINE MIR -13 195 30 1736 150 79 0 chr2 182711109 182711389 -70545194 + AluJb SINE Alu 5 306 -6 21 36 0 0 chr2 182713842 182713870 -70542713 + AT_rich Low_complexity Low_complexity 1 28 0 1169 195 117 6 chr2 182714404 182714738 -70541845 + L1ME2 LINE L1 2783 3153 -2993 357 188 7 139 chr2 182714746 182714864 -70541719 + L1ME2 LINE L1 5176 5308 -838 1885 130 23 0 chr2 182714864 182715165 -70541418 + AluSq SINE Alu 1 308 -5 2165 126 0 0 chr2 182715169 182715470 -70541113 + AluSx SINE Alu 1 301 -11 357 188 7 139 chr2 182715470 182715490 -70541093 + L1ME2 LINE L1 5279 5300 -846 1182 150 162 12 chr2 182715495 182715742 -70540841 + AluJo SINE Alu 1 284 -18 1769 180 101 111 chr2 182715817 182716142 -70540441 + L1ME2 LINE L1 5413 5731 -433 9658 33 3 169 chr2 182716142 182717804 -70538779 + SVA Other Other 1 1386 0 1769 180 101 111 chr2 182717804 182718084 -70538499 + L1ME2 LINE L1 5731 6012 -152 2242 88 0 0 chr2 182718670 182718973 -70537610 + AluSg SINE Alu 1 303 0 2092 105 0 7 chr2 182719213 182719522 -70537061 - AluSx SINE Alu 0 307 1 294 352 78 28 chr2 182719569 182719711 -70536872 - MIR3 SINE MIR -6 202 54 1760 176 7 7 chr2 182721198 182721500 -70535083 - AluJb SINE Alu -10 302 1 633 195 91 26 chr2 182721885 182722039 -70534544 - FRAM SINE Alu -15 161 1 21 0 0 0 chr2 182722858 182722879 -70533704 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 182723665 182723688 -70532895 + AT_rich Low_complexity Low_complexity 1 23 0 27 0 0 0 chr2 182723776 182723803 -70532780 + AT_rich Low_complexity Low_complexity 1 27 0 240 214 124 45 chr2 182723809 182723898 -70532685 - MIR3 SINE MIR -3 205 110 1570 281 141 35 chr2 182724327 182725261 -70531322 - L2 LINE L2 -98 3215 2144 326 288 56 12 chr2 182725473 182725633 -70530950 + L1ME4a LINE L1 5731 5897 -224 217 268 28 0 chr2 182725643 182725714 -70530869 + (TCTA)n Simple_repeat Simple_repeat 1 73 0 31 44 0 0 chr2 182726339 182726384 -70530199 + AT_rich Low_complexity Low_complexity 1 45 0 182 267 0 44 chr2 182727189 182727234 -70529349 + L2 LINE L2 449 491 -2823 26 64 0 0 chr2 182727304 182727351 -70529232 + AT_rich Low_complexity Low_complexity 1 47 0 232 218 0 18 chr2 182729367 182729422 -70527161 + (TA)n Simple_repeat Simple_repeat 1 54 0 23 0 0 0 chr2 182730720 182730743 -70525840 + AT_rich Low_complexity Low_complexity 1 23 0 230 271 52 83 chr2 182731330 182731426 -70525157 + L2 LINE L2 3180 3272 0 182 256 0 0 chr2 182731667 182731710 -70524873 - L2 LINE L2 0 3272 3230 476 294 27 16 chr2 182734112 182734296 -70522287 + L1ME4a LINE L1 5542 5727 -394 252 229 143 19 chr2 182734345 182734450 -70522133 + L1ME4a LINE L1 5816 5933 -188 791 256 235 26 chr2 182734455 182734962 -70521621 + L2 LINE L2 1559 2171 -1143 488 220 82 13 chr2 182734968 182735127 -70521456 + HAL1b LINE L1 717 886 -462 269 218 265 29 chr2 182735130 182735300 -70521283 + HAL1b LINE L1 923 1132 -216 1664 179 0 23 chr2 182735569 182735877 -70520706 + AluJo SINE Alu 1 301 -11 784 292 65 20 chr2 182736012 182736447 -70520136 + L2 LINE L2 2523 3080 -233 324 236 67 0 chr2 182736468 182736557 -70520026 + L1ME LINE L1 5393 5487 -677 * 1786 232 73 25 chr2 182736549 182736838 -70519745 + L1ME1 LINE L1 4672 4946 -1220 2330 91 3 0 chr2 182736838 182737135 -70519448 + AluSp SINE Alu 1 298 -15 1786 232 73 25 chr2 182737135 182738087 -70518496 + L1ME1 LINE L1 4946 6158 -8 22 56 0 0 chr2 182738721 182738757 -70517826 + AT_rich Low_complexity Low_complexity 1 36 0 28 29 0 0 chr2 182738859 182738894 -70517689 + AT_rich Low_complexity Low_complexity 1 35 0 197 265 128 51 chr2 182739111 182739228 -70517355 - L2 LINE L2 -1 3312 3187 780 202 60 11 chr2 182739879 182740062 -70516521 + L1MCa LINE L1 19 210 -6216 395 193 114 0 chr2 182740110 182740198 -70516385 + MLT1G LTR MaLR 455 552 -38 1676 153 115 26 chr2 182740388 182740813 -70515770 - Charlie1b DNA MER1_type -2 521 59 325 157 0 0 chr2 182740840 182740891 -70515692 + Tigger1 DNA MER2_type 1 51 -2367 717 249 170 14 chr2 182740931 182741383 -70515200 - L1M4 LINE L1 -2121 4025 3474 2140 131 0 10 chr2 182741424 182741736 -70514847 + AluSx SINE Alu 1 309 -3 772 260 65 19 chr2 182741737 182742045 -70514538 + L1M4 LINE L1 4601 4922 -1224 559 240 74 0 chr2 182742289 182742464 -70514119 + L1M4 LINE L1 4962 5149 -997 24 0 0 0 chr2 182742635 182742659 -70513924 + AT_rich Low_complexity Low_complexity 1 24 0 2000 161 27 3 chr2 182742668 182743004 -70513579 - MER2 DNA MER2_type 0 344 1 359 243 62 14 chr2 182743178 182743322 -70513261 + L1MC5 LINE L1 7026 7176 -785 1794 127 6 76 chr2 182743322 182743652 -70512931 + AluJo SINE Alu 1 307 -5 434 135 0 14 chr2 182743653 182743727 -70512856 + AluY SINE Alu 81 153 -158 405 189 36 185 chr2 182743754 182744056 -70512527 + L1MC5 LINE L1 7161 7417 -544 399 167 0 0 chr2 182744061 182744121 -70512462 + Tigger5 DNA MER2_type 2261 2320 -3 305 224 30 0 chr2 182744121 182744187 -70512396 - Tigger5 DNA MER2_type -2245 78 11 261 138 123 0 chr2 182744266 182744331 -70512252 + L1MC5 LINE L1 7504 7576 -385 254 284 63 0 chr2 182744645 182744740 -70511843 + MER103 DNA DNA 55 155 -11 286 244 77 0 chr2 182746037 182746115 -70510468 + L2 LINE L2 3192 3275 -38 275 280 38 91 chr2 182746866 182746998 -70509585 - L2 LINE L2 -24 3289 3165 601 343 60 0 chr2 182747518 182747734 -70508849 + MIR SINE MIR 20 248 -14 194 256 73 61 chr2 182747781 182747863 -70508720 + L2 LINE L2 3185 3267 -5 2302 86 30 3 chr2 182748010 182748313 -70508270 + AluSx SINE Alu 1 311 -1 1421 186 43 46 chr2 182748904 182749275 -70507308 + L1ME1 LINE L1 5788 6157 -9 1654 162 19 44 chr2 182749332 182749647 -70506936 + AluJo SINE Alu 6 312 0 360 111 0 0 chr2 182749652 182749706 -70506877 + (TA)n Simple_repeat Simple_repeat 1 54 0 2385 82 0 3 chr2 182750106 182750411 -70506172 - AluY SINE Alu -5 306 3 2044 86 69 3 chr2 182750797 182751087 -70505496 - AluSx SINE Alu -3 309 1 330 26 0 0 chr2 182751303 182751342 -70505241 + (GA)n Simple_repeat Simple_repeat 1 39 0 279 0 0 0 chr2 182751341 182751372 -70505211 + (TG)n Simple_repeat Simple_repeat 1 31 0 * 217 213 0 0 chr2 182751409 182751456 -70505127 + GA-rich Low_complexity Low_complexity 2 48 0 183 42 0 0 chr2 182751456 182751480 -70505103 + (TG)n Simple_repeat Simple_repeat 2 25 0 964 158 7 26 chr2 182751485 182751637 -70504946 - FRAM SINE Alu -30 146 1 343 176 0 47 chr2 182751750 182751835 -70504748 - L1ME4a LINE L1 -56 6065 5985 632 288 98 71 chr2 182752065 182752423 -70504160 - L1ME4a LINE L1 -417 5704 5332 1713 198 0 3 chr2 182752423 182752711 -70503872 - AluJo SINE Alu -22 290 4 632 288 98 71 chr2 182752711 182752730 -70503853 - L1ME4a LINE L1 -789 5332 5315 355 284 0 0 chr2 182752831 182752905 -70503678 - MIR3 SINE MIR -48 160 87 1843 231 82 64 chr2 182753562 182753840 -70502743 + L1MC4 LINE L1 6444 6715 -1327 2055 158 99 10 chr2 182753840 182754232 -70502351 + MSTA LTR MaLR 1 427 -1 1843 231 82 64 chr2 182754232 182755080 -70501503 + L1MC4 LINE L1 6715 7816 -226 1284 219 9 4 chr2 182755178 182755411 -70501172 + Tigger7 DNA MER2_type 1 234 -471 639 175 0 0 chr2 182755415 182755518 -70501065 + Tigger7 DNA MER2_type 2485 2587 0 2857 89 73 94 chr2 182757076 182757704 -70498879 + MER4B LTR ERV1 1 779 0 293 165 0 184 chr2 182757918 182758027 -70498556 + MER58C DNA MER1_type 127 215 0 389 238 95 0 chr2 182758547 182758652 -70497931 - L2 LINE L2 -2 3270 3156 271 236 104 19 chr2 182759398 182759504 -70497079 + MER103 DNA DNA 4 118 -48 1369 235 94 74 chr2 182760258 182760756 -70495827 - MLT1J LTR MaLR 0 511 4 251 161 0 54 chr2 182761644 182761700 -70494883 - MADE1 DNA Mariner -7 73 21 1097 143 194 8 chr2 182761919 182762156 -70494427 - Tigger3b DNA MER2_type -1 1231 951 2200 83 0 39 chr2 182762160 182762472 -70494111 + AluSg SINE Alu 1 300 -10 2682 108 65 83 chr2 182762480 182762558 -70494025 - Tigger3b DNA MER2_type -2370 658 580 2243 91 20 0 chr2 182762558 182762856 -70493727 + AluSq SINE Alu 1 304 -9 2682 108 65 83 chr2 182762856 182763343 -70493240 - Tigger3b DNA MER2_type -2448 580 103 1649 251 136 16 chr2 182763678 182764229 -70492354 + Charlie2 DNA MER1_type 11 627 -2155 557 228 69 37 chr2 182764203 182764449 -70492134 + Charlie2 DNA MER1_type 2403 2656 -206 * 411 232 27 0 chr2 182764480 182764592 -70491991 + Charlie2 DNA MER1_type 2726 2840 -22 2133 209 67 52 chr2 182764592 182764710 -70491873 + MLT1E2 LTR MaLR 1 116 -510 2558 77 0 0 chr2 182764710 182765021 -70491562 + AluSx SINE Alu 2 312 0 2133 209 67 52 chr2 182765021 182765518 -70491065 + MLT1E2 LTR MaLR 116 625 -1 2283 103 0 0 chr2 182766333 182766625 -70489958 + AluSg1 SINE Alu 1 292 -17 1195 155 75 13 chr2 182766855 182767081 -70489502 - AluJo SINE Alu -10 302 63 415 185 0 0 chr2 182767308 182767373 -70489210 - AluJo SINE Alu -237 65 1 1846 155 3 7 chr2 182767656 182767953 -70488630 + AluSx SINE Alu 1 296 -16 25 0 0 0 chr2 182768298 182768323 -70488260 + AT_rich Low_complexity Low_complexity 1 25 0 1814 169 14 0 chr2 182768723 182769007 -70487576 + AluJo SINE Alu 1 288 -24 1497 197 11 0 chr2 182769399 182769663 -70486920 + AluJb SINE Alu 21 287 -25 580 237 105 26 chr2 182769977 182770167 -70486416 - MIR SINE MIR 0 262 58 2167 122 0 0 chr2 182770384 182770680 -70485903 - AluSx SINE Alu -16 296 1 231 298 161 29 chr2 182770997 182771202 -70485381 + L1ME LINE L1 5506 5737 -384 2381 67 0 3 chr2 182771471 182771791 -70484792 + AluY SINE Alu 1 319 0 2121 84 81 0 chr2 182772268 182772553 -70484030 + AluSg SINE Alu 2 309 -1 28 48 0 0 chr2 182772610 182772652 -70483931 + AT_rich Low_complexity Low_complexity 1 42 0 44 35 0 0 chr2 182772803 182772861 -70483722 + AT_rich Low_complexity Low_complexity 1 58 0 1976 156 0 0 chr2 182772872 182773174 -70483409 + AluSx SINE Alu 1 302 -10 1546 104 134 15 chr2 182773473 182773742 -70482841 - AluSx SINE Alu 0 302 2 1992 99 18 0 chr2 182774298 182774582 -70482001 - AluY SINE Alu -19 292 4 456 135 0 0 chr2 182779101 182779175 -70477408 + (TG)n Simple_repeat Simple_repeat 2 75 0 2591 63 46 3 chr2 182779184 182779535 -70477048 - THE1C LTR MaLR -8 367 2 212 0 36 0 chr2 182779778 182779806 -70476777 + (TG)n Simple_repeat Simple_repeat 1 29 0 23 54 0 0 chr2 182780273 182780310 -70476273 + AT_rich Low_complexity Low_complexity 1 37 0 327 275 93 44 chr2 182780562 182780744 -70475839 - L2 LINE L2 -17 3296 3106 286 357 76 43 chr2 182781815 182782143 -70474440 + L2 LINE L2 926 1264 -2050 21 0 0 0 chr2 182782224 182782245 -70474338 + AT_rich Low_complexity Low_complexity 1 21 0 497 247 130 19 chr2 182782316 182782470 -70474113 + MIR SINE MIR 21 191 -71 1079 136 65 100 chr2 182782580 182782859 -70473724 - Tigger2 DNA MER2_type -1 2717 2449 3729 132 87 23 chr2 182782901 182783093 -70473490 - Tigger2 DNA MER2_type -1974 744 566 2196 84 40 3 chr2 182783093 182783391 -70473192 + AluSx SINE Alu 1 309 -3 3729 132 87 23 chr2 182783391 182783897 -70472686 - Tigger2 DNA MER2_type -2152 566 1 540 135 14 17 chr2 182784983 182785097 -70471486 - L1MB4 LINE L1 -6 6178 6063 639 96 0 0 chr2 182785128 182785211 -70471372 - HY4 scRNA scRNA -9 84 2 1959 161 78 14 chr2 182785224 182785670 -70470913 - L1MB5 LINE L1 -120 6054 5589 496 269 99 29 chr2 182785711 182785882 -70470701 - MER5A DNA MER1_type -1 188 6 652 292 82 8 chr2 182787370 182787613 -70468970 + MIR SINE MIR 2 262 0 1705 157 10 48 chr2 182788111 182788424 -70468159 - AluJo SINE Alu -9 303 3 333 369 99 0 chr2 182791229 182791370 -70465213 + MER91A DNA MER1_type 42 196 0 2297 93 3 6 chr2 182791971 182792283 -70464300 + AluY SINE Alu 1 311 0 337 288 189 13 chr2 182792651 182792804 -70463779 + MLT1H1 LTR MaLR 323 502 -53 1775 167 18 0 chr2 182793438 182793719 -70462864 - AluJo SINE Alu -22 290 5 1736 181 3 3 chr2 182793932 182794219 -70462364 + AluJb SINE Alu 1 287 -25 617 294 131 63 chr2 182795218 182795691 -70460892 + MLT1J LTR MaLR 1 505 -6 391 216 57 82 chr2 182795819 182796013 -70460570 - LTR41 LTR ERVL -3 770 582 567 233 68 100 chr2 182796064 182796373 -70460210 - LTR50 LTR ERVL -474 299 1 389 235 87 43 chr2 182796373 182796488 -70460095 + L2 LINE L2 3153 3272 0 21 0 0 0 chr2 182796509 182796530 -70460053 + AT_rich Low_complexity Low_complexity 1 21 0 6757 119 5 26 chr2 182796530 182796707 -70459876 - L1MA2 LINE L1 0 6304 6125 2177 113 0 10 chr2 182796707 182797017 -70459566 - AluSc SINE Alu -2 307 1 6757 119 5 26 chr2 182797017 182798266 -70458317 - L1MA2 LINE L1 -179 6125 4906 18692 51 5 1 chr2 182798343 182801507 -70455076 + L1PA5 LINE L1 2979 6150 -4 23 33 0 0 chr2 182801524 182801554 -70455029 + AT_rich Low_complexity Low_complexity 1 30 0 29 28 0 0 chr2 182801631 182801667 -70454916 + AT_rich Low_complexity Low_complexity 1 36 0 1101 282 145 5 chr2 182801757 182802065 -70454518 + L2 LINE L2 2858 3234 -79 1953 130 50 13 chr2 182802065 182802366 -70454217 - AluSx SINE Alu 0 312 1 1101 282 145 5 chr2 182802366 182802451 -70454132 + L2 LINE L2 3234 3306 -7 232 273 13 0 chr2 182802467 182802544 -70454039 + HAL1b LINE L1 1269 1346 -2 23 0 0 0 chr2 182802580 182802603 -70453980 + AT_rich Low_complexity Low_complexity 1 23 0 188 33 0 33 chr2 182802775 182802805 -70453778 + (TG)n Simple_repeat Simple_repeat 2 30 0 681 137 0 0 chr2 182803720 182803822 -70452761 - AluJ/FLAM SINE Alu -210 102 1 2483 160 15 68 chr2 182804660 182805191 -70451392 + MLT1D LTR MaLR 3 505 0 1205 109 0 0 chr2 182805639 182805795 -70450788 + AluSc SINE Alu 138 293 -16 2271 101 0 0 chr2 182806052 182806340 -70450243 - AluSx SINE Alu -24 288 1 23 68 0 0 chr2 182808124 182808168 -70448415 + AT_rich Low_complexity Low_complexity 1 44 0 200 227 0 0 chr2 182808637 182808681 -70447902 + T-rich Low_complexity Low_complexity 1 44 0 217 268 28 0 chr2 182808793 182808864 -70447719 + (TAGA)n Simple_repeat Simple_repeat 1 73 0 311 288 56 12 chr2 182808874 182809034 -70447549 - L1ME4a LINE L1 -224 5897 5731 428 271 48 48 chr2 182809246 182809475 -70447108 + L2 LINE L2 2144 2372 -942 207 0 0 0 chr2 182810375 182810398 -70446185 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 1729 142 3 41 chr2 182810398 182810693 -70445890 - AluJb SINE Alu -28 284 1 416 35 17 0 chr2 182812356 182812414 -70444169 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 464 148 0 57 chr2 182813741 182813829 -70442754 - MER81 DNA DNA -29 85 3 1817 150 13 20 chr2 182814059 182814359 -70442224 + AluJo SINE Alu 1 298 -14 319 121 108 0 chr2 182814837 182814920 -70441663 + L1P2 LINE L1 5460 5551 -604 2549 49 0 7 chr2 182815234 182815541 -70441042 + AluY SINE Alu 1 305 -6 233 315 0 0 chr2 182816213 182816302 -70440281 - L1ME4a LINE L1 -104 6017 5929 1777 203 33 7 chr2 182816328 182816747 -70439836 + L1MB4 LINE L1 4899 5328 -818 2007 125 3 21 chr2 182816747 182816900 -70439683 + AluSx SINE Alu 1 148 -161 2002 149 54 38 chr2 182816900 182817343 -70439240 - LTR7 LTR ERV1 0 450 1 2007 125 3 21 chr2 182817343 182817503 -70439080 + AluSx SINE Alu 148 309 0 4909 154 14 9 chr2 182817503 182818358 -70438225 + L1MB4 LINE L1 5321 6179 -1 1871 200 37 136 chr2 182818520 182819526 -70437057 - L1MC5 LINE L1 -51 7910 7005 233 275 83 46 chr2 182819583 182819692 -70436891 + L3 LINE CR1 1462 1574 -3 301 219 70 78 chr2 182819926 182820054 -70436529 - L1MC4 LINE L1 -6 8036 7910 953 192 36 27 chr2 182820139 182820358 -70436225 - L1MC4 LINE L1 -132 7910 7690 378 233 0 11 chr2 182820457 182820547 -70436036 - LTR67 LTR ERVL -13 544 456 614 300 45 45 chr2 182820586 182820829 -70435754 - MIR SINE MIR 0 262 20 520 30 0 0 chr2 182822154 182822220 -70434363 - L1PA2 LINE L1 -2 6153 6088 1302 146 31 0 chr2 182822536 182822762 -70433821 - L1MB3 LINE L1 -7 6176 5944 1581 99 32 6 chr2 182823233 182823734 -70432849 + L1MA4 LINE L1 5588 6299 -1 985 135 0 0 chr2 182823770 182823903 -70432680 - FLAM_C SINE Alu -10 133 1 533 289 14 21 chr2 182823918 182824060 -70432523 - MIR SINE MIR -89 173 33 503 270 68 6 chr2 182824946 182825109 -70431474 + MER5B DNA MER1_type 3 175 -3 1093 164 5 5 chr2 182825120 182825309 -70431274 - MER5A DNA MER1_type 0 189 1 21 57 0 19 chr2 182825963 182825982 -70430601 + AT_rich Low_complexity Low_complexity 1 19 -33 1513 184 14 38 chr2 182825982 182826275 -70430308 - AluJb SINE Alu -26 286 1 21 57 0 19 chr2 182826275 182826308 -70430275 + AT_rich Low_complexity Low_complexity 19 52 0 4878 150 24 8 chr2 182826312 182827160 -70429423 - L1MC1 LINE L1 -1 6332 5472 208 0 62 0 chr2 182827160 182827192 -70429391 + (TA)n Simple_repeat Simple_repeat 1 34 0 6681 129 92 96 chr2 182827288 182828896 -70427687 - L1MCa LINE L1 -4044 2382 781 1464 172 4 4 chr2 182828896 182829140 -70427443 - L1MCa LINE L1 -6164 262 19 24 67 0 0 chr2 182829287 182829332 -70427251 + AT_rich Low_complexity Low_complexity 1 45 0 25 0 0 0 chr2 182829339 182829364 -70427219 + AT_rich Low_complexity Low_complexity 1 25 0 24 32 0 0 chr2 182829925 182829956 -70426627 + AT_rich Low_complexity Low_complexity 1 31 0 2065 164 82 6 chr2 182829957 182830323 -70426260 + MSTB LTR MaLR 1 394 -32 599 212 34 0 chr2 182831514 182831660 -70424923 - L1MA10 LINE L1 -7 6327 6177 623 232 36 24 chr2 182831662 182831830 -70424753 - L1ME1 LINE L1 -151 6015 5846 1192 143 22 36 chr2 182832152 182832376 -70424207 - MER96B DNA MER1_type? -195 222 2 1885 36 0 0 chr2 182832385 182832610 -70423973 - L1PA4 LINE L1 -49 6106 5882 28 0 0 0 chr2 182832620 182832648 -70423935 + AT_rich Low_complexity Low_complexity 1 28 0 189 0 0 0 chr2 182832851 182832872 -70423711 + (TA)n Simple_repeat Simple_repeat 2 22 0 1774 52 0 9 chr2 182832872 182833102 -70423481 - L1PA5 LINE L1 -3 6151 5924 1086 182 59 5 chr2 182833102 182833289 -70423294 + AluJb SINE Alu 93 289 -23 9349 209 62 7 chr2 182833317 182835809 -70420774 + L1MB8 LINE L1 2824 5447 -737 1189 183 38 136 chr2 182835819 182836246 -70420337 + MLT1C LTR MaLR 6 467 0 3075 183 23 24 chr2 182836246 182836371 -70420212 + L1MB8 LINE L1 5445 5569 -609 633 168 0 72 chr2 182836371 182836479 -70420104 + FLAM_A SINE Alu 1 115 -193 207 0 0 0 chr2 182836479 182836502 -70420081 + (TC)n Simple_repeat Simple_repeat 2 24 0 2080 130 7 0 chr2 182836502 182836803 -70419780 - AluSq SINE Alu -10 303 1 633 168 0 72 chr2 182836803 182836841 -70419742 + FLAM_A SINE Alu 113 139 -169 3075 183 23 24 chr2 182836841 182837407 -70419176 + L1MB8 LINE L1 5569 6177 -1 325 307 70 92 chr2 182837464 182837822 -70418761 + L2 LINE L2 2914 3263 -9 232 281 0 0 chr2 182838036 182838093 -70418490 + CT-rich Low_complexity Low_complexity 4 60 0 1227 226 86 26 chr2 182838143 182838493 -70418090 - L1MC4a LINE L1 0 7808 7438 343 301 36 134 chr2 182838519 182838825 -70417758 - L2 LINE L2 -44 3228 2953 1581 120 0 0 chr2 182839449 182839666 -70416917 - AluSg/x SINE Alu -12 300 84 956 163 41 54 chr2 182840152 182840373 -70416210 - L1MB8 LINE L1 0 6178 5961 396 169 0 63 chr2 182840381 182840523 -70416060 + CT-rich Low_complexity Low_complexity 1 133 0 853 78 22 39 chr2 182840533 182840712 -70415871 + (TTTC)n Simple_repeat Simple_repeat 3 178 0 403 168 21 11 chr2 182840721 182840816 -70415767 + CT-rich Low_complexity Low_complexity 3 98 0 1700 160 7 4 chr2 182840816 182841085 -70415498 - AluJb SINE Alu -38 274 5 2768 197 65 31 chr2 182841089 182841695 -70414888 - L1MB8 LINE L1 -235 5949 5263 318 86 17 0 chr2 182841695 182841753 -70414830 - L1MC2 LINE L1 -2 6342 6284 2768 197 65 31 chr2 182841753 182842253 -70414330 - L1MB8 LINE L1 -921 5263 4782 425 284 103 21 chr2 182842654 182842897 -70413686 - L1MDa LINE L1 -4613 1927 1665 655 254 33 72 chr2 182843240 182843516 -70413067 - L1MC5 LINE L1 -1002 6959 6695 750 157 12 52 chr2 182843648 182843820 -70412763 + L1MC5 LINE L1 7074 7238 -723 691 184 7 22 chr2 182843885 182844021 -70412562 - AluJo SINE Alu -178 134 1 1145 207 78 104 chr2 182844021 182844243 -70412340 + L1MC5 LINE L1 7269 7495 -466 2332 108 0 0 chr2 182844243 182844550 -70412033 + AluSg SINE Alu 3 309 -1 1145 207 78 104 chr2 182844550 182845008 -70411575 + L1MC5 LINE L1 7495 7931 -30 577 284 41 33 chr2 182844998 182845428 -70411155 + L1MC/D LINE L1 5191 5627 -753 * 627 289 124 69 chr2 182845449 182845868 -70410715 + LTR67 LTR ERVL 113 554 -3 298 239 45 0 chr2 182845869 182845936 -70410647 + L1ME LINE L1 5566 5635 -486 584 160 130 0 chr2 182845957 182846057 -70410526 + MER3 DNA MER1_type 1 113 -96 2233 104 3 3 chr2 182846057 182846356 -70410227 + AluSq SINE Alu 1 299 -14 207 0 0 0 chr2 182846356 182846379 -70410204 + (GA)n Simple_repeat Simple_repeat 2 24 0 620 172 0 0 chr2 182846388 182846487 -70410096 - FLAM_A SINE Alu -43 99 1 280 172 31 0 chr2 182846538 182846602 -70409981 + MER3 DNA MER1_type 99 164 -45 425 155 0 0 chr2 182846609 182846680 -70409903 + MER3 DNA MER1_type 138 208 -1 2289 58 24 3 chr2 182846752 182847047 -70409536 + AluY SINE Alu 1 301 -10 210 212 15 15 chr2 182847457 182847523 -70409060 + (TA)n Simple_repeat Simple_repeat 2 67 0 584 281 126 24 chr2 182847595 182847949 -70408634 + MLT1J1 LTR MaLR 20 477 -34 364 242 55 11 chr2 182848309 182848400 -70408183 - MIR3 SINE MIR -49 159 65 246 312 16 24 chr2 182849300 182849428 -70407155 - MIR3 SINE MIR -8 200 72 2440 65 0 0 chr2 182849662 182849955 -70406628 - AluY SINE Alu 0 311 19 2247 118 0 0 chr2 182850073 182850379 -70406204 + AluSq SINE Alu 1 306 -7 1122 228 0 13 chr2 182850431 182850655 -70405928 - MER58A DNA MER1_type 0 224 4 197 177 81 81 chr2 182850848 182850910 -70405673 + MIR SINE MIR 82 143 -119 577 251 18 80 chr2 182852605 182852797 -70403786 - MIR SINE MIR -36 172 31 2828 83 5 0 chr2 182852937 182853322 -70403261 + L1PA8 LINE L1 5785 6171 -1 599 243 105 28 chr2 182854351 182854582 -70402001 + MIR SINE MIR 7 262 0 4060 142 10 21 chr2 182854618 182855439 -70401144 - L1MC1 LINE L1 -37 6296 5513 228 138 15 123 chr2 182855431 182855455 -70401128 + L1MC1 LINE L1 6275 6300 -33 * 2001 130 81 26 chr2 182855455 182855800 -70400783 - THE1B LTR MaLR 0 364 1 11660 95 9 0 chr2 182855800 182857366 -70399217 - THE1B-int LTR MaLR 0 1580 1 1895 99 149 19 chr2 182857366 182857688 -70398895 - THE1B LTR MaLR 0 364 1 228 138 15 123 chr2 182857688 182857726 -70398857 + L1MC1 LINE L1 6297 6332 -1 1966 160 0 0 chr2 182858640 182858947 -70397636 - AluJb SINE Alu -3 309 3 362 237 118 53 chr2 182860379 182860531 -70396052 - MIR SINE MIR 0 262 101 693 272 239 16 chr2 182860669 182861241 -70395342 + L2 LINE L2 2616 3313 0 184 324 135 0 chr2 182862694 182862805 -70393778 - MIR SINE MIR 0 262 137 2424 110 31 3 chr2 182862904 182863258 -70393325 + THE1B LTR MaLR 1 364 0 205 298 60 86 chr2 182863279 182863430 -70393153 - MIR SINE MIR -114 148 2 7394 122 75 6 chr2 182864032 182865250 -70391333 + HSMAR2 DNA Mariner 1 1302 0 375 285 70 16 chr2 182867869 182868055 -70388528 + MIR SINE MIR 11 206 -56 2044 110 47 7 chr2 182868142 182868442 -70388141 - AluSq SINE Alu -1 312 1 25 83 0 0 chr2 182869343 182869403 -70387180 + AT_rich Low_complexity Low_complexity 1 60 0 1772 78 0 21 chr2 182869674 182869917 -70386666 - L1PA6 LINE L1 -15 6139 5902 294 268 37 12 chr2 182870063 182870145 -70386438 - L2 LINE L2 -4 3268 3185 319 372 0 16 chr2 182870228 182870357 -70386226 + L2 LINE L2 3145 3271 -1 525 320 117 5 chr2 182870641 182870847 -70385736 - MIR SINE MIR -33 229 1 1320 187 6 39 chr2 182871917 182872082 -70384501 + MER33 DNA MER1_type 1 151 -2434 2216 104 3 0 chr2 182872082 182872380 -70384203 + AluSq SINE Alu 1 299 -14 1320 187 6 39 chr2 182872380 182872545 -70384038 + MER33 DNA MER1_type 151 320 -4 2505 191 18 19 chr2 182872723 182873290 -70383293 + L1MB8 LINE L1 5613 6178 0 347 296 17 0 chr2 182873355 182873470 -70383113 + L1ME4a LINE L1 5684 5800 -2008 3379 150 123 71 chr2 182873518 182874843 -70381740 - pTR5 LTR ERV1 -143 2295 276 239 202 175 44 chr2 182874934 182875048 -70381535 + L1ME4a LINE L1 5963 6091 -30 21 0 0 0 chr2 182875148 182875169 -70381414 + AT_rich Low_complexity Low_complexity 1 21 0 366 252 78 29 chr2 182876442 182876545 -70380038 + MER81 DNA DNA 6 113 -1 617 273 50 6 chr2 182876561 182876749 -70379834 - MIR SINE MIR -48 214 16 435 278 27 32 chr2 182877520 182877707 -70378876 - L1MC4a LINE L1 -1874 5934 5749 257 135 19 0 chr2 182877779 182877831 -70378752 + (TA)n Simple_repeat Simple_repeat 1 53 0 280 213 0 43 chr2 182877831 182877925 -70378658 + L1MC4 LINE L1 6614 6703 -1339 200 244 0 0 chr2 182877926 182877967 -70378616 + (TA)n Simple_repeat Simple_repeat 1 41 0 29 0 0 0 chr2 182878041 182878070 -70378513 + AT_rich Low_complexity Low_complexity 1 29 0 784 127 0 0 chr2 182878070 182878188 -70378395 - L1MA1 LINE L1 0 6302 6185 617 252 39 39 chr2 182878209 182878443 -70378140 - L1MC4 LINE L1 -1826 5982 5749 224 238 151 95 chr2 182879489 182879511 -70377072 + MIR SINE MIR 13 32 -230 1546 80 0 5 chr2 182879511 182879711 -70376872 + AluY SINE Alu 100 298 -13 224 238 151 95 chr2 182879711 182879814 -70376769 + MIR SINE MIR 32 145 -117 180 77 0 0 chr2 182880821 182880847 -70375736 + (TGAA)n Simple_repeat Simple_repeat 4 29 0 31 0 0 0 chr2 182882915 182882946 -70373637 + AT_rich Low_complexity Low_complexity 1 31 0 721 248 134 15 chr2 182883156 182883358 -70373225 - MIR SINE MIR -6 256 31 304 284 135 14 chr2 182883609 182883757 -70372826 + MIR SINE MIR 97 262 0 2745 10 0 0 chr2 182884412 182884711 -70371872 - AluY SINE Alu -12 299 1 239 318 24 63 chr2 182884912 182885038 -70371545 - MIR SINE MIR -85 177 57 21 0 0 0 chr2 182885478 182885499 -70371084 + AT_rich Low_complexity Low_complexity 1 21 0 208 246 33 16 chr2 182885800 182885861 -70370722 + MIR SINE MIR 79 140 -68 613 231 22 8 chr2 182885981 182886115 -70370468 - MER63 DNA MER1_type -73 763 2 209 180 20 0 chr2 182886194 182886244 -70370339 + CT-rich Low_complexity Low_complexity 2 52 0 27 49 0 0 chr2 182886477 182886518 -70370065 + AT_rich Low_complexity Low_complexity 1 41 0 223 255 0 0 chr2 182888449 182888496 -70368087 + L2 LINE L2 3263 3309 -4 269 224 158 0 chr2 182889141 182889217 -70367366 + MIR3 SINE MIR 120 207 -1 291 339 73 9 chr2 182890054 182890163 -70366420 + MIR SINE MIR 27 142 -66 2096 117 0 0 chr2 182891684 182891985 -70364598 + AluSq SINE Alu 4 304 0 2147 152 18 33 chr2 182893951 182894345 -70362238 + MLT1B LTR MaLR 1 388 -2 235 268 0 28 chr2 182894416 182894487 -70362096 - MIR SINE MIR -16 246 178 869 141 0 15 chr2 182897065 182897200 -70359383 + FLAM_C SINE Alu 1 133 0 341 302 217 21 chr2 182897263 182897452 -70359131 + MIR SINE MIR 28 253 -9 426 246 225 0 chr2 182897482 182897624 -70358959 + MIR SINE MIR 68 241 -21 2300 70 21 0 chr2 182897831 182898118 -70358465 + AluY SINE Alu 1 293 -18 1490 199 59 68 chr2 182898161 182898682 -70357901 - MER39 LTR ERV1 0 707 1 2253 102 3 0 chr2 182899015 182899309 -70357274 + AluSx SINE Alu 1 295 -17 800 259 116 5 chr2 182901805 182902029 -70354554 + MIR SINE MIR 14 262 0 228 276 92 41 chr2 182902177 182902275 -70354308 - MIR SINE MIR -119 143 41 383 301 15 41 chr2 182904128 182904324 -70352259 - L1MC4a LINE L1 -945 6863 6673 2235 122 0 0 chr2 182904629 182904932 -70351651 - AluSc SINE Alu -6 303 1 371 295 53 93 chr2 182905429 182905805 -70350778 - L1MEd LINE L1 -5089 1030 670 22 0 0 0 chr2 182906474 182906496 -70350087 + AT_rich Low_complexity Low_complexity 1 22 0 476 283 118 7 chr2 182907152 182907304 -70349279 + MIR SINE MIR 37 205 -57 400 307 147 35 chr2 182907836 182908237 -70348346 + L2 LINE L2 2040 2485 -829 2602 240 36 23 chr2 182911018 182911768 -70344815 - MER21B LTR ERV1 -51 812 53 409 213 21 11 chr2 182911765 182911859 -70344724 - MER21B LTR ERV1 -760 103 9 * 10964 113 26 1 chr2 182913459 182913526 -70343057 + L1PA10 LINE L1 3632 3696 -2472 1958 141 47 0 chr2 182913526 182913824 -70342759 + AluSx SINE Alu 1 312 0 10964 113 26 1 chr2 182913824 182916265 -70340318 + L1PA10 LINE L1 3696 6167 -1 705 266 82 0 chr2 182916319 182916503 -70340080 + MIR SINE MIR 63 261 -1 198 0 0 0 chr2 182918082 182918104 -70338479 + (A)n Simple_repeat Simple_repeat 1 22 0 24 53 0 0 chr2 182918631 182918669 -70337914 + AT_rich Low_complexity Low_complexity 1 38 0 298 279 49 66 chr2 182920310 182920432 -70336151 - MIR SINE MIR -63 145 26 2346 82 0 3 chr2 182921233 182921526 -70335057 + AluSc SINE Alu 1 292 -17 264 77 0 0 chr2 182921526 182921565 -70335018 + (CA)n Simple_repeat Simple_repeat 2 40 0 288 0 0 0 chr2 182922743 182922775 -70333808 + (CA)n Simple_repeat Simple_repeat 1 32 0 802 230 37 26 chr2 182922906 182923097 -70333486 - MIR SINE MIR -66 196 4 2382 92 7 0 chr2 182923444 182923749 -70332834 + AluSp SINE Alu 1 307 -6 267 287 52 23 chr2 182924243 182924417 -70332166 + L1ME4a LINE L1 5730 5908 -213 608 274 85 14 chr2 182924904 182925116 -70331467 - MIR SINE MIR 0 262 36 2181 113 3 3 chr2 182925140 182925433 -70331150 + AluSq SINE Alu 1 293 -20 598 75 21 0 chr2 182926026 182926119 -70330464 + (TCTA)n Simple_repeat Simple_repeat 3 97 0 249 322 167 0 chr2 182926533 182926623 -70329960 - MIR SINE MIR -93 169 65 579 222 66 75 chr2 182928018 182928230 -70328353 - MIR SINE MIR 0 262 53 2334 92 0 13 chr2 182928914 182929228 -70327355 + AluSx SINE Alu 1 310 -2 1104 279 45 15 chr2 182929650 182929987 -70326596 + L3 LINE CR1 1230 1576 -1 27 0 0 0 chr2 182930019 182930046 -70326537 + AT_rich Low_complexity Low_complexity 1 27 0 382 285 33 34 chr2 182930505 182930805 -70325778 - MLT1I LTR MaLR 0 409 68 5528 85 22 0 chr2 182931872 182932674 -70323909 - L1PA13 LINE L1 -19 6144 5325 306 309 62 0 chr2 182932855 182932952 -70323631 - L2 LINE L2 -18 3295 3193 239 284 0 14 chr2 182933274 182933348 -70323235 + LTR33A LTR ERVL 444 516 -7 2059 167 51 0 chr2 182934049 182934421 -70322162 + MER47B DNA MER2_type 28 418 0 222 37 0 0 chr2 182934425 182934452 -70322131 + (CA)n Simple_repeat Simple_repeat 2 28 0 353 329 39 7 chr2 182935025 182935180 -70321403 - MIR SINE MIR -56 206 47 218 194 0 0 chr2 182935201 182935237 -70321346 + (TG)n Simple_repeat Simple_repeat 1 36 0 337 261 128 0 chr2 182935473 182935661 -70320922 - L1ME4a LINE L1 -32 6089 5878 858 170 35 0 chr2 182936364 182936564 -70320019 - L1MA4 LINE L1 0 6300 6094 180 274 81 16 chr2 182937271 182937333 -70319250 + L3b LINE CR1 1401 1466 -117 250 358 6 34 chr2 182937493 182937672 -70318911 + GA-rich Low_complexity Low_complexity 2 175 0 576 261 149 54 chr2 182937689 182938079 -70318504 - MLT1J2 LTR MaLR -19 431 5 952 313 125 14 chr2 182938807 182938822 -70317761 + L3 LINE CR1 896 908 -669 2188 99 6 39 chr2 182938822 182939156 -70317427 + AluSg SINE Alu 1 310 0 952 313 125 14 chr2 182939156 182939635 -70316948 + L3 LINE CR1 908 1445 -132 2394 78 3 10 chr2 182940943 182941252 -70315331 + AluY SINE Alu 1 307 -4 2621 51 0 3 chr2 182942314 182942626 -70313957 - AluY SINE Alu 0 311 1 1617 152 48 28 chr2 182942632 182942922 -70313661 - AluJo SINE Alu -16 296 1 432 264 84 54 chr2 182942927 182943295 -70313288 - L1ME4a LINE L1 -315 5855 5502 2379 80 10 3 chr2 182944003 182944304 -70312279 + AluSc SINE Alu 1 303 -6 2448 47 40 0 chr2 182945058 182945357 -70311226 + HERV17 LTR ERV1 7694 8004 -622 * 6299 63 17 0 chr2 182945348 182946115 -70310468 + HERV17 LTR ERV1 7843 8622 -4 2787 52 0 0 chr2 182946119 182946445 -70310138 + LTR17 LTR ERV1 1 326 -454 334 257 337 0 chr2 182946479 182946666 -70309917 - MIR SINE MIR 0 262 13 1855 151 11 0 chr2 182947573 182947876 -70308707 - AluJb SINE Alu 0 306 1 427 225 133 0 chr2 182947936 182948056 -70308527 + MIR SINE MIR 111 246 -16 184 219 0 24 chr2 182948025 182948066 -70308517 + L2 LINE L2 3220 3259 -13 * 224 234 0 0 chr2 182948122 182948169 -70308414 - MIR SINE MIR -109 153 107 336 299 139 0 chr2 182948702 182948839 -70307744 - MIR SINE MIR -56 206 51 186 43 0 0 chr2 182949359 182949382 -70307201 + (TC)n Simple_repeat Simple_repeat 2 24 0 645 14 0 0 chr2 182949384 182949458 -70307125 + (CA)n Simple_repeat Simple_repeat 1 74 0 467 293 34 0 chr2 182949533 182949680 -70306903 - MIR SINE MIR -109 153 2 339 319 22 22 chr2 182949754 182949892 -70306691 + MER5B DNA MER1_type 17 154 -24 198 286 0 0 chr2 182950344 182950414 -70306169 + CT-rich Low_complexity Low_complexity 3 72 0 2458 180 18 2 chr2 183000718 183001821 -70254762 - L1M1 LINE L1 -5801 1764 580 13763 30 1 1 chr2 183001921 183003678 -70252905 + L1P LINE L1 2037 3793 -2353 1867 55 4 0 chr2 183003778 183004014 -70252569 + L1PA3 LINE L1 5916 6152 -3 181 244 98 0 chr2 183004026 183004040 -70252543 + MIR SINE MIR 137 148 -114 390 42 0 0 chr2 183004040 183004088 -70252495 + (ATG)n Simple_repeat Simple_repeat 2 49 0 181 244 98 0 chr2 183004088 183004155 -70252428 + MIR SINE MIR 148 226 -36 32 0 0 0 chr2 183004837 183004869 -70251714 + AT_rich Low_complexity Low_complexity 1 32 0 3551 226 85 9 chr2 183004869 183005919 -70250664 + L1MC4 LINE L1 6771 7900 -142 216 220 0 68 chr2 183005928 183005987 -70250596 + polypurine Low_complexity Low_complexity 3 57 0 549 247 156 0 chr2 183006139 183006325 -70250258 + MER102a DNA MER1_type 115 329 -1 865 181 0 0 chr2 183006413 183006546 -70250037 - FLAM_C SINE Alu -10 133 1 2547 16 16 10 chr2 183007552 183007861 -70248722 + AluYb8 SINE Alu 1 311 -7 13205 20 0 0 chr2 183007961 183009839 -70246744 + L1P1 LINE L1 3769 5646 -509 824 118 13 7 chr2 183010830 183010982 -70245601 + L1MA4A LINE L1 6151 6303 0 423 0 0 0 chr2 183011451 183011498 -70245085 + (CA)n Simple_repeat Simple_repeat 2 48 0 30 0 0 0 chr2 183012539 183012569 -70244014 + AT_rich Low_complexity Low_complexity 1 30 0 297 257 55 64 chr2 183012815 183012924 -70243659 + MIR SINE MIR 90 197 -65 236 203 16 0 chr2 183013052 183013116 -70243467 - L1MC4 LINE L1 -1325 6717 6653 2039 109 0 11 chr2 183013140 183013415 -70243168 - AluSg SINE Alu -21 289 18 228 222 28 14 chr2 183014620 183014692 -70241891 + CT-rich Low_complexity Low_complexity 3 75 0 2149 133 0 0 chr2 183015087 183015395 -70241188 - AluSx SINE Alu 0 312 5 509 63 0 13 chr2 183015402 183015481 -70241102 + (TCTA)n Simple_repeat Simple_repeat 1 78 0 284 83 21 0 chr2 183015484 183015532 -70241051 + (TA)n Simple_repeat Simple_repeat 1 49 0 2167 100 7 0 chr2 183015548 183015827 -70240756 - AluSc SINE Alu -24 285 5 249 139 0 0 chr2 183018284 183018327 -70238256 + (TG)n Simple_repeat Simple_repeat 1 43 0 238 286 27 18 chr2 183018999 183019121 -70237462 + MIR SINE MIR 75 192 -62 412 215 59 15 chr2 183020243 183020378 -70236205 - AluY SINE Alu -11 300 160 21 57 0 0 chr2 183021976 183022011 -70234572 + AT_rich Low_complexity Low_complexity 1 35 0 2179 159 68 12 chr2 183022271 183022680 -70233903 - MSTB1 LTR MaLR 0 432 1 276 304 157 0 chr2 183022758 183022860 -70233723 - L2 LINE L2 -3 3269 3152 402 163 31 31 chr2 183023158 183023287 -70233296 + GA-rich Low_complexity Low_complexity 5 133 0 186 43 0 0 chr2 183023583 183023606 -70232977 + (TTTTC)n Simple_repeat Simple_repeat 3 25 0 6516 98 12 0 chr2 183023741 183025454 -70231129 - L1PA8 LINE L1 0 6172 4448 11284 169 19 18 chr2 183025843 183031367 -70225216 - L1MA2 LINE L1 0 7723 2275 348 281 0 0 chr2 183031423 183031505 -70225078 + L1 LINE L1 2603 2684 -3462 2027 126 0 0 chr2 183031554 183032021 -70224562 - L1M1 LINE L1 -5292 2273 1756 1844 151 26 49 chr2 183032130 183032560 -70224023 - L1M1 LINE L1 -7133 432 13 2154 184 11 5 chr2 183032685 183033131 -70223452 - L1MB4 LINE L1 0 6180 5732 673 280 68 21 chr2 183033223 183033459 -70223124 + MIR SINE MIR 5 251 -11 7245 51 1 0 chr2 183033484 183034557 -70222026 + L1PA5 LINE L1 5073 6146 -8 334 24 0 0 chr2 183034564 183034606 -70221977 + L1P LINE L1 2177 2218 -3928 303 148 2 16 chr2 183034706 183034780 -70221803 + AluS SINE Alu 224 284 -16 281 311 91 0 chr2 183035255 183035387 -70221196 + MLT1J LTR MaLR 103 246 -265 390 200 32 11 chr2 183035482 183035577 -70221006 + MLT1J1 LTR MaLR 345 441 -5 1656 173 0 39 chr2 183035955 183036267 -70220316 + AluJo SINE Alu 1 300 -12 320 301 195 0 chr2 183036450 183036563 -70220020 - L2 LINE L2 -4 3268 3134 * 596 292 115 10 chr2 183036538 183036747 -70219836 + MIR SINE MIR 26 256 -6 326 141 0 16 chr2 183036766 183036830 -70219753 + (TGG)n Simple_repeat Simple_repeat 3 65 0 512 346 128 14 chr2 183037206 183037573 -70219010 - L2 LINE L2 -940 2374 1966 1330 64 0 0 chr2 183037688 183037845 -70218738 + AluY SINE Alu 81 237 -74 222 150 0 0 chr2 183037857 183037897 -70218686 + (A)n Simple_repeat Simple_repeat 1 40 0 1130 153 0 36 chr2 183038511 183038707 -70217876 - MER5A DNA MER1_type 0 189 1 192 324 141 27 chr2 183038715 183038900 -70217683 - L2 LINE L2 -1318 1996 1791 183 42 0 0 chr2 183038993 183039017 -70217566 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 368 346 59 70 chr2 183039021 183039504 -70217079 - L2 LINE L2 -19 3253 2781 1142 162 14 14 chr2 183039504 183039726 -70216857 - L1MB8 LINE L1 -10 6168 5947 368 346 59 70 chr2 183039726 183040155 -70216428 - L2 LINE L2 -491 2781 2349 405 299 102 44 chr2 183040840 183041114 -70215469 - L3b LINE CR1 -119 1464 1175 314 213 102 0 chr2 183041257 183041365 -70215218 - L1ME4a LINE L1 -2 6119 6001 496 270 66 20 chr2 183041641 183041793 -70214790 + MER5A DNA MER1_type 7 165 -24 5961 90 86 0 chr2 183042253 183043096 -70213487 - L1PA11 LINE L1 -10 6164 5282 243 0 0 0 chr2 183043096 183043123 -70213460 + (TG)n Simple_repeat Simple_repeat 2 28 0 5961 90 86 0 chr2 183043123 183043268 -70213315 - L1PA11 LINE L1 -892 5282 5151 2634 98 8 82 chr2 183043269 183043912 -70212671 + L1PB1 LINE L1 5162 5750 -401 227 149 0 21 chr2 183043912 183043959 -70212624 + (TA)n Simple_repeat Simple_repeat 1 46 0 2634 98 8 82 chr2 183043959 183044331 -70212252 + L1PB1 LINE L1 5750 6148 -3 7153 140 6 2 chr2 183044345 183045556 -70211027 - L1P LINE L1 -980 5166 3951 836 270 18 7 chr2 183045997 183046271 -70210312 - L1ME4a LINE L1 -204 5917 5641 207 311 0 0 chr2 183046767 183046828 -70209755 - MIR SINE MIR 0 262 202 1449 272 85 32 chr2 183046842 183047397 -70209186 - MLT1E LTR MaLR -9 584 1 217 252 281 0 chr2 183047451 183047564 -70209019 - MIR SINE MIR -61 147 3 546 242 28 88 chr2 183048455 183048516 -70208067 + MIR3 SINE MIR 32 95 -113 1960 138 0 21 chr2 183048516 183048828 -70207755 - AluJb SINE Alu 0 306 1 546 242 28 88 chr2 183048828 183048947 -70207636 + MIR3 SINE MIR 95 202 -6 2041 124 10 3 chr2 183049445 183049735 -70206848 - AluSq SINE Alu -21 292 1 971 229 6 0 chr2 183049921 183050104 -70206479 - MER5A DNA MER1_type 0 189 6 286 184 99 90 chr2 183050221 183050444 -70206139 - MER113 DNA MER1_type? -294 227 3 363 279 41 61 chr2 183051553 183051700 -70204883 + MER5A DNA MER1_type 23 166 -23 * 866 190 12 6 chr2 183051572 183051735 -70204848 - MER5A DNA MER1_type -25 164 1 2131 100 13 27 chr2 183052067 183052368 -70204215 - AluSx SINE Alu -15 297 1 210 289 0 0 chr2 183052389 183052441 -70204142 + L2 LINE L2 3221 3272 0 413 289 144 20 chr2 183052497 183052698 -70203885 + MIR SINE MIR 5 230 -32 21 0 0 0 chr2 183052720 183052741 -70203842 + AT_rich Low_complexity Low_complexity 1 21 0 227 324 176 19 chr2 183052968 183053076 -70203507 - L2 LINE L2 -2 3270 3146 282 73 0 0 chr2 183053291 183053332 -70203251 + (TTG)n Simple_repeat Simple_repeat 2 42 0 1181 208 112 16 chr2 183053947 183054260 -70202323 + MER2 DNA MER2_type 2 344 -1 211 154 51 0 chr2 183054871 183054910 -70201673 - L3b LINE CR1 -5 1578 1538 490 107 13 0 chr2 183055530 183055605 -70200978 - MADE1 DNA Mariner 0 80 5 1500 178 3 20 chr2 183056303 183056645 -70199938 - L1PA16 LINE L1 -1367 4779 4444 * 3969 174 74 56 chr2 183056640 183058011 -70198572 + L1PA16 LINE L1 4797 6157 -9 210 312 16 95 chr2 183058418 183058607 -70197976 + MER5B DNA MER1_type 5 178 0 305 262 84 9 chr2 183059122 183059229 -70197354 - MLT1L LTR MaLR -235 380 266 304 293 37 12 chr2 183059570 183059652 -70196931 + L2 LINE L2 3103 3186 -86 387 331 19 12 chr2 183061255 183061415 -70195168 - MIR SINE MIR -8 254 94 348 182 0 0 chr2 183061419 183061474 -70195109 - MER5A DNA MER1_type -12 177 123 299 237 76 13 chr2 183061502 183061639 -70194944 + MLT2B1 LTR ERVL 240 305 -109 553 176 0 0 chr2 183061640 183061731 -70194852 - MER5A DNA MER1_type -98 91 1 342 245 109 59 chr2 183063200 183063550 -70193033 + MLT1J LTR MaLR 60 467 -44 225 323 73 62 chr2 183063604 183063700 -70192883 - MIR SINE MIR -144 118 22 464 286 43 0 chr2 183065460 183065600 -70190983 - MIR SINE MIR -37 225 80 2112 141 0 16 chr2 183066145 183066457 -70190126 - AluSq SINE Alu -6 307 1 1485 122 19 11 chr2 183066624 183066895 -70189688 - L1MB7 LINE L1 -252 5932 5660 7238 229 51 16 chr2 183066908 183067692 -70188891 - L1M4c LINE L1 -1271 5373 4618 2217 123 36 25 chr2 183067692 183068050 -70188533 - THE1B LTR MaLR -2 362 1 7238 229 51 16 chr2 183068050 183069571 -70187012 - L1M4c LINE L1 -2026 4618 2988 1607 106 144 0 chr2 183069580 183069864 -70186719 + L1P4 LINE L1 5256 5580 -588 * 5956 227 61 57 chr2 183069862 183070120 -70186463 - L1M4c LINE L1 -3657 2987 2732 4227 85 15 5 chr2 183070120 183070730 -70185853 + L1MA1 LINE L1 5683 6298 -4 5956 227 61 57 chr2 183070730 183073312 -70183271 - L1M4c LINE L1 -3912 2732 93 2857 6 0 6 chr2 183073312 183073627 -70182956 + AluYb8 SINE Alu 1 313 -5 5956 227 61 57 chr2 183073627 183073720 -70182863 - L1M4c LINE L1 -6551 93 2 1491 29 5 5 chr2 183073926 183074131 -70182452 - L1P2 LINE L1 -682 5473 5269 455 314 29 7 chr2 183074134 183074274 -70182309 - MIR SINE MIR -118 144 2 545 285 0 0 chr2 183074732 183074855 -70181728 + MIR SINE MIR 7 129 -133 1157 273 100 15 chr2 183075052 183075463 -70181120 - MLT1J2 LTR MaLR 0 450 5 388 295 32 19 chr2 183076360 183076516 -70180067 + MER117 DNA MER1_type 11 168 -29 1396 232 8 0 chr2 183077605 183077859 -70178724 - AluJo SINE Alu -56 256 1 3028 147 8 4 chr2 183078045 183078568 -70178015 - L1MA4 LINE L1 -1 6299 5775 23 0 0 0 chr2 183079096 183079119 -70177464 + AT_rich Low_complexity Low_complexity 1 23 0 361 245 13 40 chr2 183079603 183079754 -70176829 + (TA)n Simple_repeat Simple_repeat 1 147 0 2063 134 49 0 chr2 183079795 183080123 -70176460 + MER2 DNA MER2_type 1 344 0 187 391 55 18 chr2 183081131 183081241 -70175342 + L2 LINE L2 3101 3214 -58 439 274 0 10 chr2 183081279 183081381 -70175202 + L2 LINE L2 2384 2484 -830 459 182 39 182 chr2 183081438 183081641 -70174942 + MER5B DNA MER1_type 1 174 -4 509 301 87 18 chr2 183081805 183082034 -70174549 - MIR SINE MIR -11 251 7 1789 35 0 0 chr2 183082190 183082392 -70174191 + AluY SINE Alu 99 300 -11 336 261 17 35 chr2 183083772 183083887 -70172696 + L2 LINE L2 3201 3313 0 1488 117 0 0 chr2 183084112 183084333 -70172250 + AluSc SINE Alu 83 303 0 325 315 23 39 chr2 183084626 183084756 -70171827 + MIR SINE MIR 16 143 -65 882 248 203 14 chr2 183084836 183085260 -70171323 - MLT1D LTR MaLR -1 504 1 330 229 36 0 chr2 183085388 183085471 -70171112 - MER5A DNA MER1_type -95 94 9 726 253 24 0 chr2 183085912 183086082 -70170501 + MER96 DNA MER1_type 2 175 0 376 345 48 82 chr2 183086273 183086673 -70169910 + L2 LINE L2 2805 3190 -82 243 282 35 12 chr2 183086639 183086724 -70169859 - L2 LINE L2 -25 3247 3161 * 4318 260 70 36 chr2 183086834 183087889 -70168694 + L1ME1 LINE L1 53 1070 -5326 2188 125 0 3 chr2 183087889 183088193 -70168390 + AluSc SINE Alu 1 303 -6 4318 260 70 36 chr2 183088193 183088266 -70168317 + L1ME1 LINE L1 1070 1139 -5257 2136 133 10 0 chr2 183088266 183088568 -70168015 + AluSq SINE Alu 1 305 -8 4318 260 70 36 chr2 183088568 183089131 -70167452 + L1ME1 LINE L1 1139 1817 -4579 2135 141 0 0 chr2 183089131 183089429 -70167154 + AluSx SINE Alu 1 298 -14 4318 260 70 36 chr2 183089429 183089589 -70166994 + L1ME1 LINE L1 1817 1970 -4426 506 157 0 0 chr2 183089597 183089686 -70166897 + L1MB8 LINE L1 6090 6178 0 41 21 0 0 chr2 183089786 183089834 -70166749 + AT_rich Low_complexity Low_complexity 1 48 0 2561 221 32 111 chr2 183089836 183090624 -70165959 + L1ME1 LINE L1 3727 4373 -1842 2327 102 0 0 chr2 183090624 183090927 -70165656 + AluSq SINE Alu 1 303 -10 2561 221 32 111 chr2 183090927 183091450 -70165133 + L1ME1 LINE L1 4373 4935 -1280 * 2929 215 60 27 chr2 183091442 183092266 -70164317 + L1ME1 LINE L1 5381 6231 -4 1214 118 18 0 chr2 183094641 183094810 -70161773 + L1PB4 LINE L1 5984 6155 -1 2119 105 10 7 chr2 183095166 183095460 -70161123 + THE1A LTR MaLR 61 355 0 11951 99 3 0 chr2 183095460 183097029 -70159554 + THE1A-int LTR MaLR 1 1574 -6 2555 84 17 3 chr2 183097034 183097379 -70159204 + THE1A LTR MaLR 1 350 -5 180 185 0 111 chr2 183097698 183097752 -70158831 + L2 LINE L2 3221 3268 -4 251 195 134 37 chr2 183097877 183097959 -70158624 - MIR SINE MIR -77 131 42 491 259 138 11 chr2 183098376 183098565 -70158018 - MIR SINE MIR 0 262 50 186 103 0 0 chr2 183100866 183100895 -70155688 + (TG)n Simple_repeat Simple_repeat 1 29 0 2889 97 14 0 chr2 183101324 183101694 -70154889 - THE1C LTR MaLR 0 375 1 1089 205 66 0 chr2 183101738 183101982 -70154601 + MER46C DNA MER2_type 79 338 0 201 301 14 41 chr2 183102212 183102285 -70154298 - L2 LINE L2 -16 3256 3186 236 158 0 0 chr2 183102421 183102459 -70154124 - L2 LINE L2 -218 3054 3017 817 295 92 26 chr2 183103415 183103795 -70152788 - MLT1I LTR MaLR 0 409 5 22 0 0 73 chr2 183105934 183105975 -70150608 + AT_rich Low_complexity Low_complexity 1 38 0 288 301 81 24 chr2 183106116 183106325 -70150258 + L1MC4a LINE L1 5687 5907 -1901 1392 202 55 0 chr2 183106629 183106901 -70149682 - AluJo SINE Alu -20 292 6 309 300 95 52 chr2 183107062 183107272 -70149311 - L3 LINE CR1 -196 1381 1163 32 0 0 0 chr2 183107450 183107482 -70149101 + AT_rich Low_complexity Low_complexity 1 32 0 2340 136 27 24 chr2 183107487 183107861 -70148722 - THE1C LTR MaLR 0 375 1 573 304 23 106 chr2 183108079 183108604 -70147979 - L2 LINE L2 -53 3219 2739 316 341 29 22 chr2 183108662 183108800 -70147783 + MIR SINE MIR 90 228 -34 2236 119 0 0 chr2 183110943 183111254 -70145329 + AluSx SINE Alu 1 311 -1 2187 107 7 0 chr2 183111460 183111749 -70144834 + AluSq SINE Alu 1 291 -22 332 250 125 52 chr2 183111764 183111900 -70144683 - MIR SINE MIR -39 223 78 2168 152 56 19 chr2 183111906 183112282 -70144301 - MLT1B LTR MaLR 0 390 1 440 294 96 80 chr2 183112375 183112852 -70143731 - LTR33A LTR ERVL -32 491 7 282 304 29 10 chr2 183114164 183114266 -70142317 + L2 LINE L2 3179 3282 -31 776 201 61 0 chr2 183114572 183114736 -70141847 - MER5B DNA MER1_type -1 177 4 24 32 0 0 chr2 183115557 183115588 -70140995 + AT_rich Low_complexity Low_complexity 1 31 0 556 328 21 0 chr2 183115860 183116046 -70140537 - MIR SINE MIR -71 191 2 716 289 61 4 chr2 183116825 183117088 -70139495 + MER46C DNA MER2_type 18 295 -43 3100 32 5 3 chr2 183117407 183117777 -70138806 - L1HS LINE L1 0 6155 5785 2291 108 3 3 chr2 183118412 183118719 -70137864 - AluSg SINE Alu -3 307 1 40334 62 31 2 chr2 183118732 183124712 -70131871 - L1PA6 LINE L1 -1 6153 3 278 311 113 5 chr2 183124989 183125030 -70131553 - MIR SINE MIR -65 143 108 207 100 0 0 chr2 183125030 183125060 -70131523 + (TTA)n Simple_repeat Simple_repeat 3 32 0 278 311 113 5 chr2 183125060 183125177 -70131406 - MIR SINE MIR -100 108 25 185 268 107 0 chr2 183125307 183125363 -70131220 + MIR SINE MIR 127 188 -74 1601 237 58 26 chr2 183125363 183125865 -70130718 + L1ME3A LINE L1 5449 5966 -204 25 0 0 0 chr2 183125977 183126002 -70130581 + AT_rich Low_complexity Low_complexity 1 25 0 335 296 171 45 chr2 183127610 183127897 -70128686 + L2 LINE L2 2941 3263 -9 432 248 105 92 chr2 183128261 183128677 -70127906 + MLT1H LTR MaLR 12 478 -71 630 180 161 25 chr2 183129416 183129577 -70127006 - MIR SINE MIR -14 248 66 669 268 74 25 chr2 183129714 183129957 -70126626 - MIR SINE MIR 0 262 8 292 207 0 160 chr2 183130087 183130160 -70126423 + L2 LINE L2 3188 3227 -86 2382 78 0 10 chr2 183130160 183130467 -70126116 - AluY SINE Alu -7 304 1 292 207 0 160 chr2 183130467 183130543 -70126040 + L2 LINE L2 3226 3313 0 1963 174 51 18 chr2 183130640 183131030 -70125553 - MLT1C LTR MaLR 0 467 65 254 256 46 24 chr2 183135724 183135831 -70120752 - MIR SINE MIR -67 141 52 536 291 41 50 chr2 183136698 183136845 -70119738 + MIR SINE MIR 33 179 -83 2465 63 3 3 chr2 183136845 183137144 -70119439 + AluY SINE Alu 1 299 -12 536 291 41 50 chr2 183137144 183137216 -70119367 + MIR SINE MIR 179 250 -12 832 219 96 0 chr2 183137296 183137483 -70119100 + MIR SINE MIR 2 206 -56 314 235 76 84 chr2 183137555 183137674 -70118909 - MIR SINE MIR -71 137 20 1491 216 49 12 chr2 183137821 183138149 -70118434 + MER58B DNA MER1_type 1 340 -1 650 271 133 10 chr2 183138334 183138537 -70118046 + MIR SINE MIR 35 262 0 1665 156 74 0 chr2 183138989 183139272 -70117311 - AluJo SINE Alu -8 304 1 183 328 53 46 chr2 183139482 183139613 -70116970 + MIR3 SINE MIR 71 202 -6 473 310 162 5 chr2 183140188 183140385 -70116198 + MIR SINE MIR 35 262 0 433 47 31 0 chr2 183141500 183141564 -70115019 + (TCTA)n Simple_repeat Simple_repeat 2 67 0 240 35 0 0 chr2 183141595 183141624 -70114959 + (TG)n Simple_repeat Simple_repeat 2 30 0 338 329 45 7 chr2 183142469 183142624 -70113959 + L3 LINE CR1 1401 1561 -16 2818 143 38 7 chr2 183143174 183143621 -70112962 + LOR1b LTR ERV1 1 461 0 851 168 0 0 chr2 183143704 183143835 -70112748 + FRAM SINE Alu 12 142 -34 252 0 0 0 chr2 183143901 183143929 -70112654 + (TA)n Simple_repeat Simple_repeat 2 29 0 1376 139 163 16 chr2 183143929 183144187 -70112396 - AluJb SINE Alu -15 297 2 1636 190 8 95 chr2 183144260 183144660 -70111923 + MLT1A1 LTR MaLR 1 365 0 772 134 123 78 chr2 183144944 183145123 -70111460 + MER53 DNA DNA 2 188 -1 1986 129 0 30 chr2 183146235 183146530 -70110053 + AluSx SINE Alu 1 286 -26 1944 97 22 0 chr2 183147000 183147321 -70109262 - L1PB2 LINE L1 -2 6149 5855 591 53 0 0 chr2 183147319 183147395 -70109188 - L1PB2 LINE L1 -262 5889 5814 * 186 303 181 32 chr2 183147444 183147599 -70108984 - MIR3 SINE MIR -11 197 20 2316 75 10 7 chr2 183148057 183148352 -70108231 - AluY SINE Alu -15 296 1 4177 90 3 2 chr2 183148400 183148977 -70107606 + L1PA11 LINE L1 5595 6172 -2 1290 131 0 110 chr2 183149160 183149362 -70107221 - L1MA2 LINE L1 -2 6302 6140 1633 132 64 54 chr2 183149362 183149658 -70106925 + AluJb SINE Alu 1 299 -13 1290 131 0 110 chr2 183149658 183149746 -70106837 - L1MA2 LINE L1 -164 6140 6044 184 281 16 16 chr2 183149763 183149827 -70106756 + L2 LINE L2 2992 3055 -217 24 0 0 0 chr2 183149884 183149908 -70106675 + AT_rich Low_complexity Low_complexity 1 24 0 1951 130 3 60 chr2 183151266 183151582 -70105001 + AluSq SINE Alu 1 298 -15 459 196 159 9 chr2 183151586 183151693 -70104890 + MIR SINE MIR 29 151 -111 289 73 0 0 chr2 183151693 183151734 -70104849 + MADE1 DNA Mariner 1 41 -39 345 71 18 0 chr2 183151738 183151794 -70104789 - L1PA6 LINE L1 0 6154 6098 1795 111 77 0 chr2 183151934 183152195 -70104388 - AluSg SINE Alu -29 281 1 528 260 183 27 chr2 183152310 183152529 -70104054 + MIR SINE MIR 2 254 -8 258 105 0 0 chr2 183152529 183152567 -70104016 + (TTA)n Simple_repeat Simple_repeat 2 39 0 261 83 0 0 chr2 183152680 183152716 -70103867 + (TTCA)n Simple_repeat Simple_repeat 2 37 0 380 290 122 8 chr2 183152728 183152859 -70103724 - L2 LINE L2 0 3272 3127 967 188 0 0 chr2 183152880 183153034 -70103549 + FRAM SINE Alu 1 154 -12 186 327 0 0 chr2 183153225 183153277 -70103306 - L2 LINE L2 -573 2741 2690 493 225 40 54 chr2 183157848 183158070 -70098513 - L1MC5 LINE L1 -47 7914 7696 242 261 9 108 chr2 183158390 183158501 -70098082 - L2 LINE L2 -5 3308 3209 30 59 0 0 chr2 183158793 183158844 -70097739 + AT_rich Low_complexity Low_complexity 1 51 0 445 286 16 73 chr2 183159274 183159589 -70096994 - L1ME3A LINE L1 -221 5949 5653 22 0 0 0 chr2 183161796 183161818 -70094765 + AT_rich Low_complexity Low_complexity 1 22 0 26 30 0 0 chr2 183163570 183163603 -70092980 + AT_rich Low_complexity Low_complexity 1 33 0 251 230 283 18 chr2 183164358 183164471 -70092112 + MIR SINE MIR 120 262 0 228 226 0 0 chr2 183164509 183164571 -70092012 + (TG)n Simple_repeat Simple_repeat 1 62 0 200 214 18 0 chr2 183164662 183164718 -70091865 + GA-rich Low_complexity Low_complexity 2 58 0 356 276 16 19 chr2 183166447 183166555 -70090028 + MIR SINE MIR 36 145 -63 214 139 28 0 chr2 183166718 183166754 -70089829 + MIR SINE MIR 116 152 -110 264 59 0 0 chr2 183167940 183167974 -70088609 + (TG)n Simple_repeat Simple_repeat 1 34 0 231 36 0 0 chr2 183167973 183168001 -70088582 + (GA)n Simple_repeat Simple_repeat 1 28 0 * 1034 153 0 0 chr2 183268725 183269112 -69987471 - ALR/Alpha Satellite centromeric 0 387 1 957 171 9 0 chr2 183269125 183269787 -69986796 - ALR/Alpha Satellite centromeric 0 668 1 1073 155 2 0 chr2 183269800 183271147 -69985436 - ALR/Alpha Satellite centromeric 0 1349 1 957 170 9 0 chr2 183271160 183271822 -69984761 - ALR/Alpha Satellite centromeric 0 668 1 1051 157 2 0 chr2 183271835 183273182 -69983401 - ALR/Alpha Satellite centromeric 0 1349 1 957 171 9 0 chr2 183273195 183273857 -69982726 - ALR/Alpha Satellite centromeric 0 668 1 1068 152 3 0 chr2 183273870 183275216 -69981367 - ALR/Alpha Satellite centromeric 0 1350 1 947 171 8 0 chr2 183275229 183275891 -69980692 - ALR/Alpha Satellite centromeric 0 667 1 1073 154 2 0 chr2 183275904 183277593 -69978990 - ALR/Alpha Satellite centromeric 0 1691 1 957 173 9 0 chr2 183277606 183278268 -69978315 - ALR/Alpha Satellite centromeric 0 668 1 1055 156 3 0 chr2 183278281 183279627 -69976956 - ALR/Alpha Satellite centromeric 0 1349 1 955 170 9 0 chr2 183279640 183280302 -69976281 - ALR/Alpha Satellite centromeric 0 668 1 1066 154 2 0 chr2 183280315 183281662 -69974921 - ALR/Alpha Satellite centromeric 0 1349 1 957 170 9 0 chr2 183281675 183282337 -69974246 - ALR/Alpha Satellite centromeric 0 668 1 1073 155 2 0 chr2 183282350 183284039 -69972544 - ALR/Alpha Satellite centromeric 0 1691 1 957 171 9 0 chr2 183284052 183284714 -69971869 - ALR/Alpha Satellite centromeric 0 667 1 1068 154 2 0 chr2 183284727 183286074 -69970509 - ALR/Alpha Satellite centromeric 0 1349 1 954 167 9 0 chr2 183286087 183286749 -69969834 - ALR/Alpha Satellite centromeric 0 668 1 1058 153 2 0 chr2 183286762 183288109 -69968474 - ALR/Alpha Satellite centromeric 0 1349 1 957 170 9 0 chr2 183288122 183288784 -69967799 - ALR/Alpha Satellite centromeric 0 668 1 1073 154 2 0 chr2 183288797 183290144 -69966439 - ALR/Alpha Satellite centromeric 0 1349 1 957 169 9 0 chr2 183290157 183290819 -69965764 - ALR/Alpha Satellite centromeric 0 668 1 1066 155 2 0 chr2 183290832 183292179 -69964404 - ALR/Alpha Satellite centromeric 0 1349 1 957 171 9 0 chr2 183292192 183292854 -69963729 - ALR/Alpha Satellite centromeric 0 668 1 1068 157 3 0 chr2 183292867 183294214 -69962369 - ALR/Alpha Satellite centromeric 0 1350 1 954 169 9 0 chr2 183294227 183294889 -69961694 - ALR/Alpha Satellite centromeric 0 668 1 1066 155 2 0 chr2 183294902 183296249 -69960334 - ALR/Alpha Satellite centromeric 0 1349 1 1073 164 5 0 chr2 183296262 183299938 -69956645 - ALR/Alpha Satellite centromeric 0 3693 1 985 172 9 0 chr2 183299951 183300951 -69955632 - ALR/Alpha Satellite centromeric 0 1008 1 1066 154 2 0 chr2 183300964 183302311 -69954272 - ALR/Alpha Satellite centromeric 0 1349 1 957 171 9 0 chr2 183302324 183302986 -69953597 - ALR/Alpha Satellite centromeric 0 667 1 1066 156 2 0 chr2 183302999 183304346 -69952237 - ALR/Alpha Satellite centromeric 0 1349 1 957 175 8 1 chr2 183304359 183305021 -69951562 - ALR/Alpha Satellite centromeric 0 666 1 987 163 13 0 chr2 183305034 183305551 -69951032 - ALR/Alpha Satellite centromeric 0 523 1 10755 63 41 2 chr2 183405659 183407202 -69849381 - L1P LINE L1 -959 5187 3585 859 226 64 53 chr2 183407302 183407353 -69849230 + MER2 DNA MER2_type 78 127 -218 2329 89 3 0 chr2 183407353 183407644 -69848939 - AluSc SINE Alu -17 292 1 859 226 64 53 chr2 183407644 183407857 -69848726 + MER2 DNA MER2_type 127 345 0 697 325 117 22 chr2 183408719 183408944 -69847639 + L1ME LINE L1 4631 4833 -1337 2949 9 0 0 chr2 183408944 183409260 -69847323 + AluYb8 SINE Alu 1 316 -2 697 325 117 22 chr2 183409260 183409762 -69846821 + L1ME LINE L1 4833 5431 -739 201 74 0 0 chr2 183409966 183409993 -69846590 + (T)n Simple_repeat Simple_repeat 1 27 0 7339 22 4 4 chr2 183410247 183411060 -69845523 + L1PA4 LINE L1 5341 6153 -2 1449 279 83 23 chr2 183411060 183411147 -69845436 + L1MEc LINE L1 1056 1136 -5260 243 0 0 0 chr2 183411147 183411174 -69845409 + (CAAAA)n Simple_repeat Simple_repeat 1 27 0 1449 279 83 23 chr2 183411174 183411867 -69844716 + L1MEc LINE L1 1136 1883 -4513 4301 235 48 22 chr2 183411879 183413167 -69843416 + L1MEc LINE L1 2582 3903 -2312 235 303 216 12 chr2 183413931 183414093 -69842490 + MIR SINE MIR 2 196 -66 1096 158 67 66 chr2 183414195 183414235 -69842348 + LTR37A LTR ERV1 6 44 -382 1652 101 55 0 chr2 183414235 183414453 -69842130 - MER30 DNA MER1_type 0 230 1 1096 158 67 66 chr2 183414453 183414775 -69841808 + LTR37A LTR ERV1 44 426 0 210 318 127 67 chr2 183415286 183415585 -69840998 - L2 LINE L2 -107 3165 2849 355 299 8 8 chr2 183415657 183415774 -69840809 - MIR SINE MIR -12 250 134 368 280 51 51 chr2 183416048 183416205 -69840378 - L1ME LINE L1 -333 5788 5632 25 90 0 0 chr2 183417313 183417380 -69839203 + AT_rich Low_complexity Low_complexity 1 67 0 15541 96 5 6 chr2 183418371 183421236 -69835347 + L1PA7 LINE L1 3282 6150 -4 183 42 0 0 chr2 183421273 183421297 -69835286 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 453 269 12 48 chr2 183422248 183422415 -69834168 - L1MEc LINE L1 -6201 195 35 228 155 0 99 chr2 183422519 183422590 -69833993 - LTR66 LTR ERVL -153 457 394 287 228 0 22 chr2 183422592 183422684 -69833899 + L1MC4 LINE L1 6614 6703 -1339 2187 108 0 3 chr2 183422711 183422998 -69833585 - AluY SINE Alu -24 287 2 634 135 24 71 chr2 183422999 183423169 -69833414 + L1MEc LINE L1 70 1104 -5292 * 26570 53 2 0 chr2 183423167 183426465 -69830118 + L1P LINE L1 623 3926 -2220 231 36 0 0 chr2 183426466 183426494 -69830089 + (TAA)n Simple_repeat Simple_repeat 2 29 0 293 276 41 10 chr2 183426500 183426598 -69829985 - MIR SINE MIR -83 179 79 308 313 20 20 chr2 183426913 183427012 -69829571 - L2 LINE L2 0 3272 3174 238 239 266 0 chr2 183427889 183427998 -69828585 + MIR SINE MIR 125 262 0 2119 151 19 80 chr2 183429101 183429513 -69827070 + MLT1B LTR MaLR 2 388 -2 730 197 78 7 chr2 183429796 183429938 -69826645 - MER5A DNA MER1_type -21 168 17 820 238 192 51 chr2 183430169 183430560 -69826023 - MLT1J1 LTR MaLR 0 446 1 307 291 117 44 chr2 183430843 183431057 -69825526 - MIR SINE MIR -27 235 3 188 277 169 27 chr2 183431197 183431345 -69825238 + MIR SINE MIR 60 228 -34 1069 65 0 3 chr2 183432005 183432235 -69824348 + AluY SINE Alu 2 309 -2 417 296 118 38 chr2 183432249 183432435 -69824148 + MIR SINE MIR 50 250 -12 493 272 120 26 chr2 183433384 183433575 -69823008 - MIR SINE MIR -3 259 51 764 263 17 0 chr2 183433629 183433804 -69822779 - MER5A DNA MER1_type -8 181 4 410 255 31 0 chr2 183434198 183434296 -69822287 + MIR SINE MIR 18 118 -90 239 0 32 0 chr2 183435708 183435739 -69820844 + (GA)n Simple_repeat Simple_repeat 2 33 0 231 335 124 39 chr2 183436422 183436753 -69819830 - L3b LINE CR1 -5 1578 1220 2076 187 68 35 chr2 183436913 183437104 -69819479 + MLT1D LTR MaLR 1 184 -321 2102 26 4 0 chr2 183437104 183437333 -69819250 + L1PA5 LINE L1 5910 6139 -15 304 22 44 0 chr2 183437333 183437378 -69819205 + (TA)n Simple_repeat Simple_repeat 2 48 0 2076 187 68 35 chr2 183437378 183437667 -69818916 + MLT1D LTR MaLR 183 498 -7 2051 205 96 46 chr2 183437878 183438596 -69817987 - L1MC5 LINE L1 -44 7917 7164 774 214 0 0 chr2 183438596 183438722 -69817861 - FLAM_C SINE Alu -16 127 2 727 206 12 6 chr2 183438729 183438899 -69817684 - L1MC5 LINE L1 -787 7174 7004 1016 180 17 0 chr2 183438899 183439071 -69817512 + FRAM SINE Alu 1 172 -4 246 174 0 0 chr2 183439188 183439234 -69817349 + GA-rich Low_complexity Low_complexity 4 49 0 1379 233 29 61 chr2 183439336 183439870 -69816713 - L1MC5 LINE L1 -854 6954 6435 820 242 38 5 chr2 183441305 183441491 -69815092 + MIR SINE MIR 71 262 0 966 265 61 10 chr2 183442343 183442637 -69813946 - MER20B DNA MER1_type -249 534 226 417 241 44 66 chr2 183442680 183442817 -69813766 - MER20B DNA MER1_type -649 134 1 16549 140 12 100 chr2 183442996 183446590 -69809993 - L1P LINE L1 -2859 3287 9 243 103 0 0 chr2 183446606 183446645 -69809938 + (TTG)n Simple_repeat Simple_repeat 2 40 0 453 293 47 20 chr2 183446816 183446966 -69809617 - MIR SINE MIR -88 174 21 1242 122 13 52 chr2 183447351 183447580 -69809003 + L1PA15 LINE L1 5946 6165 0 233 256 91 58 chr2 183447840 183448006 -69808577 + MIR3 SINE MIR 10 180 -82 2554 196 97 0 chr2 183448228 183448734 -69807849 - MER68 LTR ERV1 -2 560 6 678 264 69 72 chr2 183449181 183449613 -69806970 - MLT1J1 LTR MaLR -15 431 1 12318 51 78 4 chr2 183450532 183452253 -69804330 + L1PA2 LINE L1 1 1849 -4297 205 143 18 54 chr2 183452263 183452319 -69804264 + A-rich Low_complexity Low_complexity 1 54 0 8591 30 2 1 chr2 183452323 183453414 -69803169 + L1PA2 LINE L1 3103 4194 -1952 7734 18 0 6 chr2 183453414 183455025 -69801558 + L1PA2 LINE L1 4550 6155 0 498 273 67 72 chr2 183455605 183456038 -69800545 - MLT1J1 LTR MaLR -15 431 1 415 73 29 0 chr2 183457366 183457434 -69799149 + (TTCC)n Simple_repeat Simple_repeat 2 71 0 513 301 122 20 chr2 183457753 183458049 -69798534 - L3 LINE CR1 -105 1472 1147 269 274 197 17 chr2 183458148 183458265 -69798318 + MIR SINE MIR 20 157 -105 840 280 75 70 chr2 183458330 183458879 -69797704 - L3 LINE CR1 -595 982 340 16781 40 2 3 chr2 183460771 183463088 -69793495 + L1P LINE L1 634 3076 -3070 372 189 0 0 chr2 183463341 183463415 -69793168 + (TA)n Simple_repeat Simple_repeat 2 75 0 23 0 0 0 chr2 183464084 183464107 -69792476 + AT_rich Low_complexity Low_complexity 1 23 0 274 292 0 0 chr2 183471265 183471330 -69785253 + MIR SINE MIR 8 72 -190 658 289 111 17 chr2 183471341 183471691 -69784892 - MLT1J2 LTR MaLR 0 450 68 579 224 99 31 chr2 183471784 183471945 -69784638 + MIR SINE MIR 91 262 0 688 264 54 42 chr2 183472724 183472963 -69783620 + MIR SINE MIR 4 245 -17 * 1171 219 21 13 chr2 183472953 183473191 -69783392 - MIR SINE MIR -21 241 2 231 114 0 0 chr2 183473352 183473387 -69783196 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 433 324 60 56 chr2 183474515 183474731 -69781852 + MIR SINE MIR 1 217 -45 241 297 69 50 chr2 183474799 183474900 -69781683 + MIR3 SINE MIR 84 186 -22 207 0 0 0 chr2 183474909 183474932 -69781651 + (TG)n Simple_repeat Simple_repeat 1 23 0 327 165 101 13 chr2 183475939 183476018 -69780565 - MLT1L LTR MaLR -2 613 424 1606 138 11 11 chr2 183476042 183476325 -69780258 + MER44D DNA MER2_type 57 609 0 745 264 138 63 chr2 183476340 183476817 -69779766 - MLT1L LTR MaLR -95 520 8 338 217 14 0 chr2 183476933 183477002 -69779581 - MIR3 SINE MIR -3 205 136 425 290 65 48 chr2 183478356 183478542 -69778041 - MER5A DNA MER1_type 0 189 1 29316 113 8 56 chr2 183478619 183481932 -69774651 - L1PA7 LINE L1 -4 6150 3297 2055 84 11 14 chr2 183481932 183482250 -69774333 - AluY SINE Alu 0 317 1 29316 113 8 56 chr2 183482250 183485388 -69771195 - L1PA7 LINE L1 -2857 3297 12 560 293 36 6 chr2 183485388 183485555 -69771028 - MIR SINE MIR -36 226 55 727 312 93 44 chr2 183489009 183489580 -69767003 + L2 LINE L2 1775 2373 -941 201 147 0 0 chr2 183489693 183489727 -69766856 + (CA)n Simple_repeat Simple_repeat 1 34 0 341 287 39 106 chr2 183489731 183489985 -69766598 + L2 LINE L2 2943 3179 -93 496 341 78 46 chr2 183490469 183490903 -69765680 + L2 LINE L2 2825 3272 0 569 270 48 32 chr2 183491449 183491638 -69764945 + MIR SINE MIR 71 262 0 471 348 110 25 chr2 183492327 183492444 -69764139 + L2 LINE L2 2043 2149 -1165 1680 172 20 26 chr2 183492444 183492775 -69763808 - AluJb SINE Alu 0 312 1 471 348 110 25 chr2 183492775 183493094 -69763489 + L2 LINE L2 2149 2516 -798 1341 205 207 37 chr2 183493098 183493532 -69763051 + L1MDa LINE L1 616 1123 -5417 843 253 84 11 chr2 183493538 183493875 -69762708 - MLT1C LTR MaLR 0 467 105 4728 196 50 17 chr2 183493885 183495640 -69760943 + L1MDa LINE L1 1342 3227 -3313 2517 240 49 18 chr2 183495644 183496501 -69760082 + L1MDa LINE L1 3391 4274 -2266 971 178 11 11 chr2 183496499 183496690 -69759893 + L1MD1 LINE L1 5999 6189 -53 * 3871 121 42 3 chr2 183496692 183497065 -69759518 - L1PA13 LINE L1 0 6163 5755 405 0 0 0 chr2 183497065 183497110 -69759473 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 3871 121 42 3 chr2 183497110 183497362 -69759221 - L1PA13 LINE L1 -408 5755 5514 1696 177 20 0 chr2 183497489 183497840 -69758743 - L1PA13 LINE L1 -851 5295 4938 * 6835 159 28 23 chr2 183497837 183499215 -69757368 - L1PA13 LINE L1 -1592 4554 3170 1648 90 170 16 chr2 183499220 183499543 -69757040 - L1PB1 LINE L1 -2 6149 5777 22 0 0 0 chr2 183499568 183499590 -69756993 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 183499838 183499860 -69756723 + GC_rich Low_complexity Low_complexity 1 22 0 29 0 0 0 chr2 183499925 183499954 -69756629 + GC_rich Low_complexity Low_complexity 1 29 0 30 0 0 0 chr2 183499987 183500017 -69756566 + GC_rich Low_complexity Low_complexity 1 30 0 207 0 0 0 chr2 183500386 183500409 -69756174 + (TA)n Simple_repeat Simple_repeat 2 24 0 6527 157 17 46 chr2 183500411 183502369 -69754214 - L1PB1 LINE L1 -369 5782 3769 181 0 0 0 chr2 183502369 183502389 -69754194 + (TTA)n Simple_repeat Simple_repeat 2 180 0 2361 81 0 0 chr2 183502389 183502673 -69753910 - AluY SINE Alu -1 303 1 6527 157 17 46 chr2 183502673 183503018 -69753565 - L1PB1 LINE L1 -2380 3771 3544 1084 151 13 86 chr2 183504347 183504579 -69752004 + MER20 DNA MER1_type 1 215 -4 1718 168 7 10 chr2 183506504 183506807 -69749776 - AluJo SINE Alu -10 302 1 1786 111 0 4 chr2 183507273 183507556 -69749027 - AluSc SINE Alu 0 318 37 24 0 0 0 chr2 183508029 183508053 -69748530 + AT_rich Low_complexity Low_complexity 1 24 0 2443 128 67 50 chr2 183508703 183509124 -69747459 + MSTA LTR MaLR 1 428 0 426 219 76 27 chr2 183510809 183510958 -69745625 + L1MC5 LINE L1 7767 8041 -1 302 163 0 0 chr2 183511059 183511102 -69745481 - MER8 DNA MER2_type 0 239 197 * 2828 150 5 14 chr2 183511077 183511480 -69745103 + Tigger2 DNA MER2_type 2277 2677 -41 1976 118 80 47 chr2 183511480 183511843 -69744740 - THE1C LTR MaLR 0 375 1 2828 150 5 14 chr2 183511843 183511885 -69744698 + Tigger2 DNA MER2_type 2677 2718 0 342 0 0 0 chr2 183511889 183511927 -69744656 + (CA)n Simple_repeat Simple_repeat 1 38 0 485 212 66 66 chr2 183513510 183513661 -69742922 - L1MC4 LINE L1 -252 7790 7640 770 92 9 0 chr2 183513670 183513779 -69742804 - L1MB4 LINE L1 -1 6179 6070 667 239 0 0 chr2 183513914 183514044 -69742539 + MER2 DNA MER2_type 1 130 -215 481 151 151 0 chr2 183514046 183514139 -69742444 + MER2 DNA MER2_type 239 345 0 262 296 188 34 chr2 183514898 183515074 -69741509 - MIR SINE MIR -10 252 50 815 316 69 43 chr2 183515139 183515630 -69740953 + L3 LINE CR1 566 1069 -508 562 258 0 16 chr2 183515638 183515762 -69740821 - L2 LINE L2 -1 3271 3150 241 270 27 0 chr2 183515791 183515865 -69740718 + L3 LINE CR1 1146 1221 -356 2555 62 0 0 chr2 183515938 183516243 -69740340 - AluY SINE Alu -5 306 2 326 120 0 2 chr2 183516393 183516442 -69740141 + MLT1I LTR MaLR 100 142 -267 22 0 0 0 chr2 183516546 183516568 -69740015 + AT_rich Low_complexity Low_complexity 1 22 0 813 228 9 36 chr2 183516705 183516719 -69739864 - AluJo SINE Alu -13 299 286 2207 83 0 0 chr2 183516719 183516996 -69739587 - L1PB1 LINE L1 -1 6150 5874 813 228 9 36 chr2 183516996 183517200 -69739383 - AluJo SINE Alu -26 286 87 43612 34 22 2 chr2 183517567 183523598 -69732985 + L1PA3 LINE L1 1 6155 0 233 231 19 0 chr2 183524297 183524349 -69732234 + L2 LINE L2 3261 3313 0 1467 220 46 80 chr2 183524694 183525154 -69731429 + MLT2B1 LTR ERVL 1 444 -76 549 328 38 5 chr2 183525357 183525543 -69731040 + MER91A DNA MER1_type 4 195 -1 261 278 73 78 chr2 183525806 183525997 -69730586 - LTR67 LTR ERVL 0 557 368 361 252 140 112 chr2 183526071 183526285 -69730298 - LTR67 LTR ERVL -335 222 3 2408 98 0 0 chr2 183526690 183526995 -69729588 + AluSx SINE Alu 1 305 -7 699 181 254 27 chr2 183528177 183528437 -69728146 + MER5C DNA MER1_type 6 324 0 2528 67 0 0 chr2 183528560 183528860 -69727723 + AluY SINE Alu 1 300 -11 1601 188 31 82 chr2 183529638 183530026 -69726557 - MLT1A2 LTR MaLR -6 368 1 2873 9 0 9 chr2 183530737 183531055 -69725528 - AluYb8 SINE Alu -3 315 1 378 323 110 54 chr2 183531076 183531432 -69725151 - L2 LINE L2 -562 2752 2358 1602 150 0 59 chr2 183531432 183531738 -69724845 + AluJo SINE Alu 6 293 -19 378 323 110 54 chr2 183531738 183531883 -69724700 - L2 LINE L2 -956 2358 2223 2056 180 64 0 chr2 183533693 183534070 -69722513 + MSTB LTR MaLR 26 426 0 419 336 117 46 chr2 183534073 183534534 -69722049 - L3 LINE CR1 -81 1496 1003 389 126 48 40 chr2 183535170 183535273 -69721310 + L1M3 LINE L1 5436 5549 -625 2355 113 39 33 chr2 183535334 183535696 -69720887 - THE1B LTR MaLR 0 364 1 284 216 28 199 chr2 183535843 183535941 -69720642 - MER5B DNA MER1_type -32 146 89 1601 124 11 34 chr2 183535941 183536206 -69720377 - L1MB3 LINE L1 0 6183 5925 284 216 28 199 chr2 183536206 183536283 -69720300 - MER5B DNA MER1_type -89 89 1 1377 278 234 7 chr2 183536558 183537420 -69719163 - L2 LINE L2 -1 3312 2230 304 256 68 34 chr2 183537407 183537524 -69719059 - MER5A DNA MER1_type -10 179 59 * 38 89 0 0 chr2 183537648 183537749 -69718834 + AT_rich Low_complexity Low_complexity 1 101 0 216 0 0 0 chr2 183540006 183540030 -69716553 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2948 13 0 0 chr2 183541029 183541347 -69715236 - AluYb8 SINE Alu 0 318 1 717 295 85 26 chr2 183541347 183541808 -69714775 + L1ME4a LINE L1 5633 6120 -1 180 111 0 0 chr2 183542096 183542123 -69714460 + (TG)n Simple_repeat Simple_repeat 1 27 0 372 346 126 31 chr2 183543866 183544152 -69712431 - L2 LINE L2 -697 2617 2305 487 260 24 0 chr2 183545726 183545849 -69710734 + MER103 DNA DNA 3 128 -38 1676 166 13 20 chr2 183546509 183546811 -69709772 + AluY SINE Alu 1 300 -11 2214 149 36 33 chr2 183546854 183547243 -69709340 - MLT1B LTR MaLR 0 390 1 1775 175 13 22 chr2 183547340 183547655 -69708928 + AluJo SINE Alu 1 312 0 327 356 45 23 chr2 183549362 183549494 -69707089 - L2 LINE L2 -1 3271 3137 794 227 0 0 chr2 183549667 183549808 -69706775 + MER58A DNA MER1_type 3 143 0 785 180 122 16 chr2 183549817 183550220 -69706363 + MLT1D LTR MaLR 1 505 0 355 209 15 0 chr2 183550227 183550294 -69706289 + MER58A DNA MER1_type 157 224 0 1775 172 138 15 chr2 183550339 183550885 -69705698 - MER39B LTR ERV1 -58 595 2 1312 262 41 57 chr2 183550922 183551433 -69705150 + MLT1J LTR MaLR 5 507 -4 1159 216 11 45 chr2 183551558 183551661 -69704922 + MLT1G LTR MaLR 1 106 -484 2044 132 0 0 chr2 183551661 183551948 -69704635 - AluSg SINE Alu -23 287 1 1159 216 11 45 chr2 183551948 183552112 -69704471 + MLT1G LTR MaLR 106 259 -331 2401 117 76 15 chr2 183552118 183552461 -69704122 + THE1B LTR MaLR 1 364 0 10656 89 35 1 chr2 183552461 183553982 -69702601 + THE1B-int LTR MaLR 1 1573 -7 2205 112 77 15 chr2 183553990 183554330 -69702253 + THE1B LTR MaLR 2 362 -2 887 242 46 42 chr2 183554335 183554620 -69701963 + MLT1G LTR MaLR 285 570 -20 1592 176 109 0 chr2 183555387 183555700 -69700883 - MER7A DNA MER2_type 0 346 2 2182 109 23 0 chr2 183556238 183556541 -69700042 - AluSg SINE Alu 0 310 1 2113 143 0 37 chr2 183557131 183557481 -69699102 - MER1B DNA MER1_type 0 337 1 524 282 40 27 chr2 183557582 183557731 -69698852 + MIR3 SINE MIR 41 191 -17 278 293 60 53 chr2 183557789 183557922 -69698661 - L2 LINE L2 -1 3271 3138 300 242 44 11 chr2 183558405 183558496 -69698087 + (ATGGTG)n Simple_repeat Simple_repeat 3 96 0 680 228 114 0 chr2 183561402 183561569 -69695014 + MIR SINE MIR 73 258 -4 275 304 165 0 chr2 183562295 183562410 -69694173 + L2 LINE L2 3172 3305 -8 1027 333 117 58 chr2 183564550 183565545 -69691038 - L2 LINE L2 0 3272 2229 991 195 144 83 chr2 183565572 183565982 -69690601 - MLT1C LTR MaLR 0 467 33 241 330 23 0 chr2 183566004 183566092 -69690491 - L2 LINE L2 -1112 2202 2113 698 213 0 0 chr2 183566158 183566285 -69690298 + FLAM_C SINE Alu 3 129 -4 268 321 28 28 chr2 183566505 183566611 -69689972 + L2 LINE L2 3198 3303 -10 1120 236 92 69 chr2 183566659 183567151 -69689432 - MLT1D LTR MaLR -2 503 1 269 192 0 0 chr2 183567452 183567504 -69689079 + MER94 DNA DNA 5 56 -78 310 291 64 96 chr2 183567807 183568027 -69688556 - MIR SINE MIR -47 215 3 213 298 0 0 chr2 183568856 183568913 -69687670 - L2 LINE L2 0 3272 3216 237 65 0 0 chr2 183568923 183568954 -69687629 + (A)n Simple_repeat Simple_repeat 1 31 0 2506 67 3 0 chr2 183569248 183569560 -69687023 + AluSp SINE Alu 1 313 0 1805 160 18 3 chr2 183569700 183570043 -69686540 + L1PA16 LINE L1 5811 6158 -8 1797 225 159 8 chr2 183571747 183572337 -69684246 + L1ME1 LINE L1 5482 6160 -6 546 308 62 10 chr2 183572930 183573138 -69683445 + MIR SINE MIR 13 231 -31 27 29 0 0 chr2 183573148 183573182 -69683401 + AT_rich Low_complexity Low_complexity 1 34 0 954 89 0 0 chr2 183573413 183573536 -69683047 + AluSg/x SINE Alu 178 300 -10 185 159 23 0 chr2 183575542 183575586 -69680997 + (GAATG)n Simple_repeat Simple_repeat 5 49 0 * 192 167 0 0 chr2 183575580 183575628 -69680955 + (ATAGG)n Simple_repeat Simple_repeat 5 52 0 243 0 0 0 chr2 183578281 183578308 -69678275 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 604 194 25 135 chr2 183579127 183579364 -69677219 - MIR SINE MIR 0 262 52 1372 138 166 20 chr2 183580507 183580789 -69675794 + AluJb SINE Alu 1 318 0 577 212 33 76 chr2 183581676 183581712 -69674871 + MIR SINE MIR 76 112 -150 1790 174 35 162 chr2 183581712 183582391 -69674192 - MLT1E LTR MaLR 0 593 1 577 212 33 76 chr2 183582391 183582538 -69674045 + MIR SINE MIR 112 251 -11 232 333 0 0 chr2 183583459 183583537 -69673046 + L2 LINE L2 3195 3272 0 2807 214 55 41 chr2 183583674 183584905 -69671678 + L1ME1 LINE L1 4902 6142 -24 24 32 0 0 chr2 183584905 183584936 -69671647 + AT_rich Low_complexity Low_complexity 1 31 0 335 247 11 21 chr2 183585702 183585795 -69670788 + MIR SINE MIR 41 132 -130 2491 222 67 25 chr2 183586042 183587242 -69669341 + L1MEc LINE L1 1408 2605 -3610 229 286 32 32 chr2 183587348 183587474 -69669109 + L1M4 LINE L1 4109 4234 -1912 299 293 27 0 chr2 183587889 183587964 -69668619 + L2 LINE L2 3234 3310 -3 270 291 153 37 chr2 183588226 183588415 -69668168 - L2 LINE L2 -3 3310 3100 2280 115 0 0 chr2 183591046 183591350 -69665233 + AluSx SINE Alu 1 304 -8 269 330 0 43 chr2 183592034 183592149 -69664434 + L2 LINE L2 3200 3309 -4 198 0 0 0 chr2 183593356 183593378 -69663205 + (TC)n Simple_repeat Simple_repeat 1 22 0 270 0 0 0 chr2 183593506 183593536 -69663047 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 210 71 0 0 chr2 183593636 183593664 -69662919 + (TG)n Simple_repeat Simple_repeat 1 28 0 288 253 101 106 chr2 183593737 183593974 -69662609 + Charlie8 DNA MER1_type 182 417 -2000 859 290 116 38 chr2 183594066 183594680 -69661903 - MLT2F LTR ERVL -1 662 1 5454 99 7 13 chr2 183594833 183595671 -69660912 - L1MA4A LINE L1 -6 6297 5465 216 304 43 0 chr2 183595702 183595771 -69660812 + L2 LINE L2 3234 3305 -8 2183 120 42 28 chr2 183596056 183596413 -69660170 - THE1B LTR MaLR 0 364 3 319 199 86 0 chr2 183596717 183596808 -69659775 + MLT2E LTR ERVL 550 628 0 1373 112 5 0 chr2 183596845 183597042 -69659541 + AluY SINE Alu 106 303 -8 325 158 0 66 chr2 183597244 183597320 -69659263 + AluJ/FRAM SINE Alu 230 300 -2 291 54 0 0 chr2 183597332 183597369 -69659214 + (GGGA)n Simple_repeat Simple_repeat 4 40 0 2151 109 3 22 chr2 183597595 183597908 -69658675 - AluSx SINE Alu 0 312 6 198 240 0 0 chr2 183599755 183599805 -69656778 + CT-rich Low_complexity Low_complexity 3 52 0 26 0 0 0 chr2 183600103 183600129 -69656454 + AT_rich Low_complexity Low_complexity 1 26 0 282 29 0 0 chr2 183600966 183601001 -69655582 + (TC)n Simple_repeat Simple_repeat 1 35 0 225 0 0 0 chr2 183601000 183601025 -69655558 + (CA)n Simple_repeat Simple_repeat 1 25 0 * 1326 203 58 0 chr2 183602404 183602695 -69653888 + L1MB5 LINE L1 5867 6174 0 215 351 0 0 chr2 183602937 183603011 -69653572 + MIR SINE MIR 36 109 -153 * 373 311 62 11 chr2 183603005 183603182 -69653401 - MIR SINE MIR -4 258 73 223 260 143 39 chr2 183603196 183603273 -69653310 + MIR SINE MIR 104 188 -74 292 314 35 12 chr2 183603363 183603449 -69653134 - MIR3 SINE MIR -116 92 5 5703 72 1 0 chr2 183603639 183604323 -69652260 + L1PA8 LINE L1 5488 6172 0 511 244 184 37 chr2 183604451 183604668 -69651915 - MIR SINE MIR -7 255 7 535 68 68 0 chr2 183604690 183604764 -69651819 - MADE1 DNA Mariner 0 80 2 2102 124 0 7 chr2 183605427 183605725 -69650858 - AluSx SINE Alu -16 296 1 406 203 123 58 chr2 183605831 183605969 -69650614 + HsTC2 DNA Tc2 2 148 -1750 * 1440 201 104 37 chr2 183605961 183606395 -69650188 + HsTC2 DNA Tc2 1262 1900 0 332 274 44 15 chr2 183606748 183606883 -69649700 + MIR SINE MIR 109 247 -15 272 324 18 18 chr2 183607823 183607934 -69648649 + MIR SINE MIR 23 133 -75 204 97 0 0 chr2 183608136 183608167 -69648416 + (CA)n Simple_repeat Simple_repeat 1 31 0 29 0 0 0 chr2 183609797 183609826 -69646757 + AT_rich Low_complexity Low_complexity 1 29 0 329 319 32 27 chr2 183612311 183612500 -69644083 + MIR3 SINE MIR 8 193 -61 251 250 0 0 chr2 183612591 183612643 -69643940 + LTR30 LTR ERV1 1 52 -670 607 160 96 53 chr2 183612643 183612842 -69643741 + LTR12 LTR ERV1 100 284 -430 300 242 63 0 chr2 183612843 183612938 -69643645 + LTR30 LTR ERV1 552 652 -70 717 101 0 10 chr2 183612938 183613037 -69643546 + LTR12 LTR ERV1 484 581 -133 187 143 0 57 chr2 183613338 183613373 -69643210 - MER5A DNA MER1_type -94 95 63 2059 168 111 47 chr2 183613642 183614139 -69642444 - L1MD2 LINE L1 -2 6357 5817 535 168 0 0 chr2 183614133 183614228 -69642355 - L1MD2 LINE L1 -892 5467 5373 * 4184 91 25 4 chr2 183614260 183614820 -69641763 - L1PB1 LINE L1 -1 6150 5579 3258 90 4 31 chr2 183615128 183615584 -69640999 - L1PB2 LINE L1 -1 6150 5707 491 281 32 53 chr2 183615887 183616172 -69640411 + L1M4 LINE L1 2225 2503 -3643 228 220 298 25 chr2 183616233 183616342 -69640241 - MIR SINE MIR -66 142 19 1961 103 53 0 chr2 183616526 183616808 -69639775 + L1MA2 LINE L1 6008 6304 0 581 281 60 38 chr2 183617755 183617990 -69638593 + MIR SINE MIR 8 247 -15 2808 161 52 14 chr2 183620909 183621393 -69635190 + MLT1D LTR MaLR 1 502 -3 413 298 45 99 chr2 183621477 183621719 -69634864 + L2 LINE L2 3032 3260 -12 2401 88 3 7 chr2 183621721 183622029 -69634554 + AluSq SINE Alu 1 307 -6 1971 128 0 4 chr2 183622956 183623249 -69633334 + AluSx SINE Alu 11 302 0 280 303 59 46 chr2 183623973 183624042 -69632541 + L1MC/D LINE L1 5414 5481 -2327 1598 176 151 6 chr2 183624042 183624361 -69632222 - MLT1A1 LTR MaLR 0 365 1 280 303 59 46 chr2 183624361 183624443 -69632140 + L1MC/D LINE L1 5481 5567 -2241 894 178 13 1 chr2 183624616 183624837 -69631746 + MLT1A1 LTR MaLR 110 365 0 326 259 222 32 chr2 183625595 183625780 -69630803 - MIR SINE MIR -6 256 37 202 240 60 0 chr2 183626090 183626140 -69630443 - MIR SINE MIR -78 130 78 1853 128 46 56 chr2 183626280 183626586 -69629997 + AluSq SINE Alu 1 303 -10 768 231 60 20 chr2 183628180 183628453 -69628130 + Charlie8 DNA MER1_type 4 232 -2185 803 251 34 0 chr2 183629040 183629219 -69627364 + MER5A DNA MER1_type 2 186 -3 349 232 0 0 chr2 183629294 183629363 -69627220 - MER5A DNA MER1_type -120 69 1 430 254 66 88 chr2 183629376 183629557 -69627026 + MER5B DNA MER1_type 2 178 0 1620 166 7 14 chr2 183631152 183631436 -69625147 - AluJo SINE Alu -30 282 1 402 286 56 19 chr2 183631512 183631673 -69624910 - MIR3 SINE MIR -7 201 35 1896 129 3 34 chr2 183631827 183632121 -69624462 + AluJo SINE Alu 13 297 -15 469 252 28 35 chr2 183632878 183633064 -69623519 + MLT1I LTR MaLR 272 407 -2 523 268 0 0 chr2 183633366 183633478 -69623105 - L2 LINE L2 -5 3308 3197 307 320 39 8 chr2 183633611 183633739 -69622844 + MIR3 SINE MIR 56 187 -21 896 215 72 56 chr2 183633768 183634019 -69622564 - MIR SINE MIR -1 261 7 21 0 0 0 chr2 183634054 183634075 -69622508 + AT_rich Low_complexity Low_complexity 1 21 0 503 262 40 104 chr2 183634937 183635235 -69621348 + Charlie8 DNA MER1_type 40 1416 -1001 1297 238 117 30 chr2 183635552 183636124 -69620459 - L2 LINE L2 0 3313 2687 208 284 27 14 chr2 183636201 183636275 -69620308 + MIR3 SINE MIR 113 187 -21 499 240 13 26 chr2 183636309 183636463 -69620120 + L1MB8 LINE L1 6027 6178 0 914 281 136 25 chr2 183636463 183636868 -69619715 - L2 LINE L2 -619 2695 2246 1502 81 62 5 chr2 183636945 183637156 -69619427 + L1PA14 LINE L1 5939 6161 0 180 0 0 0 chr2 183637256 183637276 -69619307 + (CA)n Simple_repeat Simple_repeat 2 21 0 2172 123 0 0 chr2 183637370 183637671 -69618912 + AluSx SINE Alu 1 301 -11 24 0 0 0 chr2 183638186 183638210 -69618373 + AT_rich Low_complexity Low_complexity 1 24 0 602 253 120 26 chr2 183640537 183640845 -69615738 - L1ME4a LINE L1 -12 6109 5773 413 235 67 8 chr2 183641124 183641243 -69615340 + L1ME4a LINE L1 5964 6089 -32 1821 119 16 0 chr2 183642243 183642494 -69614089 + L1PB4 LINE L1 5889 6143 -13 315 277 24 0 chr2 183643156 183643239 -69613344 - L3b LINE CR1 -211 1372 1288 340 179 0 123 chr2 183643252 183643358 -69613225 - MER5B DNA MER1_type -2 176 84 22 0 0 0 chr2 183643501 183643523 -69613060 + AT_rich Low_complexity Low_complexity 1 22 0 22741 93 2 31 chr2 183647902 183651749 -69604834 + L1PA7 LINE L1 2314 6139 -15 792 128 0 34 chr2 183651749 183652017 -69604566 + (TA)n Simple_repeat Simple_repeat 1 258 0 279 204 21 43 chr2 183652018 183652111 -69604472 + L1MC4 LINE L1 6613 6703 -1339 3598 159 42 60 chr2 183652518 183653285 -69603298 - MER21A LTR ERV1 -36 895 187 431 128 26 0 chr2 183653289 183653367 -69603216 - Alu SINE Alu 0 310 231 242 149 0 21 chr2 183653396 183653443 -69603140 - MER21A LTR ERV1 -861 70 25 23 33 0 0 chr2 183653446 183653476 -69603107 + AT_rich Low_complexity Low_complexity 1 30 0 663 282 134 45 chr2 183654516 183655161 -69601422 + L2 LINE L2 2582 3299 -14 2816 10 0 0 chr2 183656010 183656317 -69600266 + AluYa5 SINE Alu 1 307 -4 1794 154 3 3 chr2 183660127 183660412 -69596171 - AluJo SINE Alu -27 285 1 717 290 45 29 chr2 183660584 183660894 -69595689 + MARNA DNA Mariner 183 497 -89 1060 226 62 0 chr2 183660930 183661173 -69595410 - L1PB4 LINE L1 -7 6149 5892 2136 127 0 0 chr2 183661604 183661896 -69594687 - AluSx SINE Alu -20 292 1 3599 108 4 66 chr2 183662120 183662682 -69593901 - MER1A DNA MER1_type 0 527 1 240 184 0 0 chr2 183663071 183663109 -69593474 + tRNA-Met-i tRNA tRNA 1 38 -37 746 231 151 4 chr2 183663181 183663406 -69593177 + MIR SINE MIR 5 262 0 240 263 0 111 chr2 183663824 183663923 -69592660 + L2 LINE L2 3006 3093 -220 843 173 0 0 chr2 183664093 183664226 -69592357 - FLAM_A SINE Alu 0 133 1 207 69 0 0 chr2 183665042 183665071 -69591512 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 344 327 183 21 chr2 183665972 183666438 -69590145 + L2 LINE L2 2696 3266 -6 12966 109 9 27 chr2 183667375 183669995 -69586588 - L1P3 LINE L1 -3831 2630 8 476 332 89 9 chr2 183670260 183670474 -69586109 + MIR SINE MIR 26 256 -6 508 216 138 31 chr2 183671418 183671672 -69584911 - L1ME4a LINE L1 -15 6106 5826 2245 102 3 0 chr2 183671679 183671973 -69584610 - AluSg SINE Alu -15 295 1 369 259 161 24 chr2 183673393 183673568 -69583015 - MIR SINE MIR -28 234 36 293 248 97 44 chr2 183673659 183673772 -69582811 + L2 LINE L2 3154 3272 0 1397 100 5 0 chr2 183675492 183675692 -69580891 + L1PA5 LINE L1 5951 6151 -3 2280 104 0 0 chr2 183675700 183675998 -69580585 + AluSq SINE Alu 1 298 -15 2048 118 3 3 chr2 183676114 183676401 -69580182 - AluSx SINE Alu -25 287 1 1928 120 39 0 chr2 183676403 183676686 -69579897 - AluSx SINE Alu -18 294 1 329 321 12 12 chr2 183678076 183678160 -69578423 - L2 LINE L2 -50 3222 3139 208 262 167 24 chr2 183678418 183678502 -69578081 + MIR SINE MIR 156 251 -11 1717 132 84 100 chr2 183679861 183680300 -69576283 - MSTB1 LTR MaLR 0 432 1 456 322 63 68 chr2 183680739 183680998 -69575585 - L2 LINE L2 -352 2962 2704 2239 107 3 10 chr2 183680998 183681308 -69575275 - AluSp SINE Alu -5 308 1 456 322 63 68 chr2 183681308 183681441 -69575142 - L2 LINE L2 -610 2704 2572 302 333 29 10 chr2 183681441 183681543 -69575040 + MIR SINE MIR 2 105 -157 1519 185 130 3 chr2 183681545 183681891 -69574692 + MSTD LTR MaLR 1 390 -6 330 333 72 13 chr2 183681895 183682048 -69574535 + MIR SINE MIR 101 262 0 327 323 242 13 chr2 183682211 183682595 -69573988 - L2 LINE L2 -933 2381 1910 * 585 262 146 33 chr2 183682590 183682865 -69573718 - L2 LINE L2 -11 3302 2997 351 277 88 15 chr2 183683713 183683850 -69572733 - MIR SINE MIR -37 225 79 189 0 0 0 chr2 183683930 183683951 -69572632 + (A)n Simple_repeat Simple_repeat 1 21 0 246 32 0 0 chr2 183685696 183685727 -69570856 + (CA)n Simple_repeat Simple_repeat 2 32 0 207 125 0 0 chr2 183686094 183686134 -69570449 + (TGGG)n Simple_repeat Simple_repeat 2 41 0 2229 95 10 3 chr2 183689168 183689464 -69567119 - AluSg SINE Alu -12 298 1 25 31 0 0 chr2 183693128 183693160 -69563423 + AT_rich Low_complexity Low_complexity 1 32 0 493 261 39 50 chr2 183693371 183693551 -69563032 - MER5B DNA MER1_type 0 178 1 24 53 0 0 chr2 183694015 183694053 -69562530 + AT_rich Low_complexity Low_complexity 1 38 0 371 202 83 0 chr2 183694197 183694281 -69562302 - MER103 DNA DNA -46 120 30 22 0 0 0 chr2 183694454 183694476 -69562107 + AT_rich Low_complexity Low_complexity 1 22 0 1875 244 89 51 chr2 183695438 183696404 -69560179 + L1MEc LINE L1 36 963 -5433 1869 149 0 11 chr2 183696404 183696680 -69559903 + AluJb SINE Alu 3 275 -37 1875 244 89 51 chr2 183696680 183696949 -69559634 + L1MEc LINE L1 963 1220 -5176 2431 88 0 3 chr2 183696949 183697256 -69559327 + AluSc SINE Alu 3 308 -1 1875 244 89 51 chr2 183697256 183697656 -69558927 + L1MEc LINE L1 1220 1863 -4533 972 166 0 9 chr2 183697656 183697822 -69558761 - MER2 DNA MER2_type -162 77 14 5111 209 35 75 chr2 183697828 183699776 -69556807 + L1MEc LINE L1 2759 4628 -1587 39 38 0 0 chr2 183699803 183699856 -69556727 + AT_rich Low_complexity Low_complexity 1 53 0 438 287 18 0 chr2 183700389 183700553 -69556030 - AluSq SINE Alu -67 246 80 1911 145 16 3 chr2 183700762 183701066 -69555517 + AluSx SINE Alu 1 308 -4 23 0 0 0 chr2 183703292 183703315 -69553268 + AT_rich Low_complexity Low_complexity 1 23 0 919 142 147 26 chr2 183703863 183704053 -69552530 + MER58A DNA MER1_type 1 213 -11 506 309 133 0 chr2 183704365 183704546 -69552037 + MIR SINE MIR 2 206 -56 1373 119 96 4 chr2 183705812 183706072 -69550511 + L1MA4 LINE L1 6012 6295 -5 403 315 129 30 chr2 183706144 183706376 -69550207 + MIR SINE MIR 6 260 -2 5886 83 24 4 chr2 183706761 183707120 -69549463 - L1PB1 LINE L1 -1 6150 5800 234 0 0 0 chr2 183707120 183707146 -69549437 + (TA)n Simple_repeat Simple_repeat 2 27 0 5886 83 24 4 chr2 183707146 183707630 -69548953 - L1PB1 LINE L1 -351 5800 5290 188 383 42 25 chr2 183707671 183707791 -69548792 + L3 LINE CR1 1002 1123 -454 440 351 37 27 chr2 183708388 183708645 -69547938 - MIR SINE MIR -4 258 2 384 343 97 42 chr2 183708703 183709300 -69547283 + L2 LINE L2 2059 2688 -626 300 234 65 56 chr2 183709864 183709971 -69546612 + MLT1E2 LTR MaLR 2 109 -517 252 193 11 102 chr2 183710657 183710745 -69545838 + MLT1G1 LTR MaLR 1 80 -487 398 189 180 0 chr2 183710837 183710948 -69545635 + MLT1G1 LTR MaLR 225 355 -187 406 268 89 8 chr2 183710962 183711085 -69545498 + MLT1G1 LTR MaLR 463 595 0 1900 157 7 3 chr2 183711533 183711832 -69544751 + AluJb SINE Alu 1 300 -12 1624 273 183 22 chr2 183711850 183712035 -69544548 + L2 LINE L2 747 901 -2413 643 237 111 0 chr2 183712035 183712225 -69544358 - MER58C DNA MER1_type -4 211 1 1624 273 183 22 chr2 183712225 183712611 -69543972 + L2 LINE L2 901 1224 -2090 2162 126 0 0 chr2 183712611 183712905 -69543678 + AluSx SINE Alu 1 294 -18 1624 273 183 22 chr2 183712905 183713102 -69543481 + L2 LINE L2 1224 1640 -1674 38628 74 10 7 chr2 183713126 183719243 -69537340 + L1PA3 LINE L1 11 6151 -4 22 80 0 0 chr2 183719617 183719667 -69536916 + AT_rich Low_complexity Low_complexity 1 50 0 700 193 40 40 chr2 183721463 183721593 -69534990 + MER3 DNA MER1_type 1 87 -75 2055 98 25 0 chr2 183721593 183721896 -69534687 - AluSx SINE Alu 0 310 1 700 193 40 40 chr2 183721896 183721940 -69534643 + MER3 DNA MER1_type 86 129 -33 234 297 59 34 chr2 183722346 183722464 -69534119 + MIR SINE MIR 111 231 -31 291 232 43 0 chr2 183722516 183722585 -69533998 + MER99 DNA DNA 4 75 -753 911 124 48 0 chr2 183722590 183722735 -69533848 - MER30 DNA MER1_type 0 230 79 2188 186 112 23 chr2 183723329 183723892 -69532691 + MER99 DNA DNA 208 820 -8 1604 109 5 0 chr2 183724350 183724570 -69532013 + AluSq SINE Alu 83 303 -10 27 0 0 0 chr2 183726258 183726285 -69530298 + AT_rich Low_complexity Low_complexity 1 27 0 28 0 0 0 chr2 183727094 183727122 -69529461 + AT_rich Low_complexity Low_complexity 1 28 0 10699 176 68 18 chr2 183727373 183727454 -69529129 - Cheshire DNA MER1_type 0 2420 2344 1998 137 14 0 chr2 183727454 183727746 -69528837 - AluSx SINE Alu -16 296 1 10699 176 68 18 chr2 183727746 183727803 -69528780 - Cheshire DNA MER1_type -76 2344 2291 1336 182 0 4 chr2 183727803 183728039 -69528544 - MER46A DNA MER2_type 0 236 2 10699 176 68 18 chr2 183728039 183730191 -69526392 - Cheshire DNA MER1_type -129 2291 15 21 0 0 0 chr2 183730538 183730559 -69526024 + AT_rich Low_complexity Low_complexity 1 21 0 621 235 54 25 chr2 183730669 183730873 -69525710 + L1M4 LINE L1 3982 4191 -1955 1598 91 43 0 chr2 183730992 183731224 -69525359 - L1MA1 LINE L1 -6 6296 6055 1971 140 0 7 chr2 183731259 183731568 -69525015 + AluSx SINE Alu 1 307 0 2160 312 142 35 chr2 183731587 183731960 -69524623 - L2 LINE L2 -405 2909 2577 2108 178 61 74 chr2 183731960 183732487 -69524096 + MLT2B1 LTR ERVL 1 520 0 2160 312 142 35 chr2 183732487 183732774 -69523809 - L2 LINE L2 -737 2577 2322 767 200 116 32 chr2 183732774 183732964 -69523619 - MER3 DNA MER1_type -1 208 3 2160 312 142 35 chr2 183732964 183733560 -69523023 - L2 LINE L2 -992 2322 1517 707 220 108 15 chr2 183733620 183733904 -69522679 - MER2 DNA MER2_type 0 345 2 187 239 197 0 chr2 183733909 183733980 -69522603 - L2 LINE L2 -1862 1452 1368 200 140 53 35 chr2 183734012 183734069 -69522514 + (GTTTG)n Simple_repeat Simple_repeat 2 59 0 489 300 36 120 chr2 183734075 183734492 -69522091 - L2 LINE L2 -1954 1360 979 317 197 63 99 chr2 183734518 183734660 -69521923 + L1MC5 LINE L1 7542 7678 -283 1972 101 7 42 chr2 183734811 183735119 -69521464 + AluSx SINE Alu 1 297 -15 27 0 0 0 chr2 183735303 183735330 -69521253 + AT_rich Low_complexity Low_complexity 1 27 0 2315 101 7 0 chr2 183736159 183736467 -69520116 + AluSx SINE Alu 1 310 -2 1005 237 24 80 chr2 183736604 183736942 -69519641 + MLT1F LTR MaLR 4 344 -223 953 179 0 46 chr2 183737286 183737481 -69519102 + MLT1F LTR MaLR 349 534 -8 889 158 0 0 chr2 183738098 183738231 -69518352 - AluJb SINE Alu -179 133 1 24 0 0 0 chr2 183738232 183738256 -69518327 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr2 183738319 183738348 -69518235 + AT_rich Low_complexity Low_complexity 1 29 0 338 306 80 15 chr2 183739066 183739265 -69517318 + L1 LINE L1 2112 2323 -3823 4756 187 38 15 chr2 183739440 183739719 -69516864 + L1MD2 LINE L1 4984 5255 -1104 2167 96 10 7 chr2 183739719 183740012 -69516571 - AluSg SINE Alu -16 294 1 4756 187 38 15 chr2 183740012 183740973 -69515610 + L1MD2 LINE L1 5255 6250 -109 1551 153 75 25 chr2 183741126 183741447 -69515136 - MER44D DNA MER2_type 0 609 3 386 231 10 19 chr2 183741452 183741556 -69515027 + L1MD2 LINE L1 6244 6346 -13 392 297 128 28 chr2 183741729 183742056 -69514527 + L1 LINE L1 2658 3017 -3129 631 289 56 69 chr2 183742144 183742672 -69513911 + L1 LINE L1 3797 4319 -1827 4620 31 4 0 chr2 183742672 183743222 -69513361 + L1PA4 LINE L1 5604 6155 0 631 289 56 69 chr2 183743222 183743244 -69513339 + L1 LINE L1 4319 4340 -1806 1819 168 0 32 chr2 183743757 183744073 -69512510 + AluSx SINE Alu 1 306 -6 2114 78 0 8 chr2 183744344 183744612 -69511971 - AluY SINE Alu -45 266 1 1954 159 3 0 chr2 183744844 183745139 -69511444 + AluJb SINE Alu 1 296 -16 2089 96 3 7 chr2 183745293 183745612 -69510971 + AluSx SINE Alu 1 318 0 5588 232 89 19 chr2 183745615 183747028 -69509555 + L1ME1 LINE L1 3338 4911 -1235 2056 110 0 42 chr2 183747028 183747336 -69509247 - AluSg SINE Alu -15 295 1 5588 232 89 19 chr2 183747336 183747771 -69508812 + L1ME1 LINE L1 4911 5314 -832 820 225 12 17 chr2 183747771 183747944 -69508639 - AluJb SINE Alu -7 305 134 288 129 6 28 chr2 183749606 183749647 -69506936 - MSTA LTR MaLR 0 428 388 2421 71 0 16 chr2 183749647 183749956 -69506627 + AluSx SINE Alu 1 304 -8 288 129 6 28 chr2 183749956 183749979 -69506604 - MSTA LTR MaLR -40 388 295 1623 178 35 6 chr2 183750003 183750317 -69506266 - MSTA LTR MaLR -27 401 79 1385 213 68 42 chr2 183750425 183750805 -69505778 + L1ME1 LINE L1 5436 5825 -341 1046 126 115 6 chr2 183750813 183750982 -69505601 - MSTA LTR MaLR -1 427 239 2294 94 0 10 chr2 183750982 183751290 -69505293 - AluSg SINE Alu -5 305 1 254 318 8 16 chr2 183751450 183751579 -69505004 - HAL1 LINE L1 -755 1752 1625 639 71 0 0 chr2 183751582 183751667 -69504916 + (TTCC)n Simple_repeat Simple_repeat 4 88 0 8928 113 32 25 chr2 183751767 183753310 -69503273 - L1P LINE L1 -3910 2236 682 1430 154 3 48 chr2 183753469 183753761 -69502822 - AluJb SINE Alu -30 282 4 1209 251 81 9 chr2 183753761 183754107 -69502476 - MER74B LTR ERVL -189 433 63 288 322 52 0 chr2 183754135 183754309 -69502274 - L1M4 LINE L1 -1198 4948 4766 2126 137 0 7 chr2 183754473 183754772 -69501811 + AluSg SINE Alu 1 297 -13 834 125 17 0 chr2 183754788 183754908 -69501675 + AluJb SINE Alu 177 298 -14 477 175 0 61 chr2 183754908 183755022 -69501561 + L1MA10 LINE L1 6113 6219 -115 7963 39 2 3 chr2 183755181 183756305 -69500278 + L1P1 LINE L1 4392 5514 -641 7973 54 5 3 chr2 183756405 183758200 -69498383 - L1PA7 LINE L1 -47 6107 4310 217 375 31 10 chr2 183758639 183758735 -69497848 + MIR SINE MIR 15 112 -150 660 204 115 90 chr2 183758800 183759158 -69497425 + MSTC LTR MaLR 3 425 -3 263 237 0 26 chr2 183759170 183759198 -69497385 - MER46A DNA MER2_type -66 170 145 927 186 12 0 chr2 183759198 183759365 -69497218 + Tigger4(Zombi) DNA MER2_type 1 169 -2562 * 1442 133 17 4 chr2 183759356 183759589 -69496994 + Tigger4(Zombi) DNA MER2_type 1463 1698 -1033 827 206 73 90 chr2 183760346 183760867 -69495716 - MLT1G LTR MaLR 0 555 50 503 286 23 75 chr2 183761539 183761888 -69494695 - HERVL40 LTR ERVL -2516 3014 2684 225 316 44 0 chr2 183761896 183762010 -69494573 + HAL1 LINE L1 1335 1453 -1054 579 122 50 13 chr2 183762012 183762234 -69494349 + GA-rich Low_complexity Low_complexity 1 230 0 941 122 115 0 chr2 183762241 183762380 -69494203 + AluSx SINE Alu 1 155 -157 213 224 9 56 chr2 183764879 183764986 -69491597 + (CGGGG)n Simple_repeat Simple_repeat 1 102 0 28 61 0 0 chr2 183765059 183765108 -69491475 + GC_rich Low_complexity Low_complexity 1 49 0 215 233 0 0 chr2 183765121 183765194 -69491389 + G-rich Low_complexity Low_complexity 1 73 0 279 0 0 0 chr2 183765258 183765289 -69491294 + (CA)n Simple_repeat Simple_repeat 2 32 0 267 233 17 0 chr2 183766386 183766446 -69490137 + MIR SINE MIR 91 151 -111 232 294 22 22 chr2 183766449 183766541 -69490042 - MIR SINE MIR -87 175 84 2013 146 3 0 chr2 183766888 183767190 -69489393 + AluSx SINE Alu 7 309 -3 2424 92 0 0 chr2 183767775 183768080 -69488503 + AluSg SINE Alu 1 305 -5 1448 94 16 0 chr2 183768280 183768472 -69488111 + AluSg/x SINE Alu 104 298 -12 385 179 13 0 chr2 183768711 183768789 -69487794 + MER116 DNA Mariner 2 80 0 27 0 0 0 chr2 183769165 183769192 -69487391 + AT_rich Low_complexity Low_complexity 1 27 0 1556 127 94 0 chr2 183769192 183769459 -69487124 - AluSx SINE Alu -20 292 1 1119 259 61 77 chr2 183769857 183771032 -69485551 - L1ME3A LINE L1 -233 5937 4780 370 275 37 37 chr2 183771010 183771199 -69485384 - L1ME3A LINE L1 -2355 3791 3603 * 1824 205 58 79 chr2 183771426 183771709 -69484874 + MLT1E2 LTR MaLR 1 288 -338 1858 114 0 77 chr2 183771709 183772032 -69484551 + AluSx SINE Alu 8 307 0 1824 205 58 79 chr2 183772032 183772394 -69484189 + MLT1E2 LTR MaLR 288 626 0 28 0 0 0 chr2 183772951 183772979 -69483604 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 183773540 183773564 -69483019 + AT_rich Low_complexity Low_complexity 1 24 0 2869 102 31 2 chr2 183775800 183776220 -69480363 - MSTB1 LTR MaLR 0 432 1 705 152 0 9 chr2 183776411 183776523 -69480060 - AluSq/x SINE Alu -201 111 1 320 244 22 33 chr2 183776550 183776640 -69479943 - MIR SINE MIR -101 161 73 2514 68 0 6 chr2 183776642 183776953 -69479630 + AluSg1 SINE Alu 1 309 0 297 286 8 84 chr2 183777187 183777306 -69479277 - MIR3 SINE MIR -45 163 54 657 237 53 32 chr2 183777783 183777973 -69478610 + MIR SINE MIR 53 246 -16 2169 110 0 13 chr2 183778247 183778547 -69478036 - AluSx SINE Alu -16 296 1 698 241 72 34 chr2 183778712 183778919 -69477664 + MIR SINE MIR 48 262 0 205 186 0 0 chr2 183781705 183781748 -69474835 + T-rich Low_complexity Low_complexity 1 43 0 227 191 0 0 chr2 183782234 183782281 -69474302 + Alu SINE Alu 108 154 -12 349 224 174 0 chr2 183782420 183782518 -69474065 - MIR SINE MIR -65 197 83 271 246 236 0 chr2 183782645 183782755 -69473828 - L2 LINE L2 -14 3299 3164 876 305 125 23 chr2 183783094 183783838 -69472745 - L2 LINE L2 -208 3064 2238 635 135 0 10 chr2 183783945 183784049 -69472534 + AluSp/q SINE Alu 197 299 -14 325 286 0 40 chr2 183784099 183784225 -69472358 - MER5B DNA MER1_type -29 149 29 215 286 14 29 chr2 183784269 183784339 -69472244 + MER5A DNA MER1_type 27 95 -94 930 117 29 0 chr2 183784871 183785008 -69471575 - AluSp SINE Alu -172 141 1 658 200 12 44 chr2 183785012 183785172 -69471411 - MLT1G LTR MaLR -59 531 377 * 799 213 6 6 chr2 183785166 183785335 -69471248 + MER3 DNA MER1_type 41 209 0 240 260 0 0 chr2 183785292 183785342 -69471241 - MER3 DNA MER1_type -119 90 41 * 633 158 11 107 chr2 183785358 183785535 -69471048 - MLT1G LTR MaLR -238 292 133 2219 111 3 0 chr2 183785535 183785832 -69470751 - AluSx SINE Alu -14 298 1 3035 231 52 25 chr2 183785839 183786362 -69470221 - L1MDb LINE L1 -2848 3558 3051 2246 108 7 0 chr2 183786362 183786657 -69469926 + AluSx SINE Alu 1 297 -15 2171 110 7 0 chr2 183786661 183786961 -69469622 + AluSx SINE Alu 1 302 -10 3035 231 52 25 chr2 183786961 183787525 -69469058 - L1MDb LINE L1 -3357 3049 2436 2350 93 0 6 chr2 183787531 183787843 -69468740 - AluSg SINE Alu 0 310 1 761 207 55 9 chr2 183787881 183788098 -69468485 - L1MDb LINE L1 -5030 1379 1153 1560 115 0 0 chr2 183788740 183788940 -69467643 + AluSx SINE Alu 1 200 -112 603 362 132 16 chr2 183789266 183789691 -69466892 - L3b LINE CR1 -8 1575 1102 213 268 49 24 chr2 183789791 183789914 -69466669 - L2 LINE L2 -70 3243 3118 404 278 152 31 chr2 183789919 183790338 -69466245 - MLT1J LTR MaLR 0 511 16 655 244 72 59 chr2 183790478 183790785 -69465798 + LTR16A1 LTR ERVL 147 457 0 241 289 124 8 chr2 183790883 183791004 -69465579 + LTR2B LTR ERV1 1 135 -314 1227 47 0 0 chr2 183791009 183791157 -69465426 + AluY SINE Alu 148 295 -16 966 175 11 14 chr2 183791162 183791453 -69465130 + LTR2B LTR ERV1 127 490 0 1765 155 0 24 chr2 183792267 183792557 -69464026 + AluJb SINE Alu 4 286 -26 441 0 0 0 chr2 183792559 183792608 -69463975 + (CA)n Simple_repeat Simple_repeat 1 49 0 319 276 197 8 chr2 183793099 183793226 -69463357 + L2 LINE L2 3116 3266 -6 22 70 0 0 chr2 183793227 183793270 -69463313 + AT_rich Low_complexity Low_complexity 1 43 0 885 208 88 13 chr2 183793304 183793612 -69462971 + LTR37A LTR ERV1 96 426 0 1736 132 6 75 chr2 183793808 183794127 -69462456 + AluJb SINE Alu 1 297 -15 206 250 0 0 chr2 183794340 183794392 -69462191 + T-rich Low_complexity Low_complexity 1 52 0 23 0 0 0 chr2 183796147 183796170 -69460413 + AT_rich Low_complexity Low_complexity 1 23 0 776 174 0 8 chr2 183800106 183800227 -69456356 - FLAM_A SINE Alu -13 120 1 2018 150 0 0 chr2 183800378 183800672 -69455911 - AluJb SINE Alu -18 294 1 29 28 0 0 chr2 183801019 183801055 -69455528 + AT_rich Low_complexity Low_complexity 1 36 0 2153 116 3 3 chr2 183801701 183802002 -69454581 + AluSx SINE Alu 1 301 -11 23 78 0 0 chr2 183802129 183802180 -69454403 + AT_rich Low_complexity Low_complexity 1 51 0 2193 99 7 0 chr2 183802182 183802518 -69454065 + AluSx SINE Alu 1 312 0 804 256 79 9 chr2 183802712 183802939 -69453644 + MIR SINE MIR 6 248 -14 23 0 0 0 chr2 183805128 183805151 -69451432 + AT_rich Low_complexity Low_complexity 1 23 0 1914 162 0 10 chr2 183805433 183805729 -69450854 - AluJb SINE Alu -19 293 1 574 244 194 9 chr2 183806832 183807049 -69449534 + MIR SINE MIR 6 262 0 249 135 0 0 chr2 183807096 183807133 -69449450 - MIR SINE MIR -120 142 106 1973 141 3 0 chr2 183807897 183808195 -69448388 - AluSx SINE Alu -13 299 1 22 35 0 0 chr2 183808563 183808592 -69447991 + AT_rich Low_complexity Low_complexity 1 29 0 415 268 74 114 chr2 183809071 183809093 -69447490 - L2 LINE L2 -1 3271 3250 1355 181 3 63 chr2 183809093 183809408 -69447175 - AluJb SINE Alu -16 296 1 415 268 74 114 chr2 183809408 183809541 -69447042 - L2 LINE L2 -22 3250 3131 2047 140 18 9 chr2 183809541 183809876 -69446707 + MER44D DNA MER2_type 2 609 0 415 268 74 114 chr2 183809876 183810018 -69446565 - L2 LINE L2 -141 3131 2985 396 311 93 56 chr2 183810202 183810523 -69446060 + MLT1K LTR MaLR 169 501 -87 252 274 147 19 chr2 183810915 183811072 -69445511 + L2 LINE L2 2885 3061 -211 1738 175 33 33 chr2 183811290 183811650 -69444933 - MER46B DNA MER2_type 0 236 2 529 279 110 7 chr2 183812246 183812569 -69444014 + L1MC4a LINE L1 5525 5774 -347 3920 254 68 38 chr2 183812663 183813271 -69443312 + L1MCc LINE L1 17 605 -5818 1756 171 3 3 chr2 183813271 183813575 -69443008 + AluJb SINE Alu 1 304 -8 3920 254 68 38 chr2 183813575 183814236 -69442347 + L1MCc LINE L1 605 1334 -5089 2280 135 42 20 chr2 183814236 183814592 -69441991 + THE1B LTR MaLR 1 364 0 3920 254 68 38 chr2 183814592 183814721 -69441862 + L1MCc LINE L1 1334 1458 -4965 1267 127 0 15 chr2 183814721 183814918 -69441665 - AluSg/x SINE Alu -18 292 99 1513 133 0 4 chr2 183814946 183815209 -69441374 + AluSg/x SINE Alu 69 310 0 767 268 49 64 chr2 183815209 183815677 -69440906 + L1MCc LINE L1 2069 2527 -4595 1712 166 0 35 chr2 183815677 183815990 -69440593 - AluJb SINE Alu -10 302 1 767 268 49 64 chr2 183815990 183816130 -69440453 + L1MCc LINE L1 2527 2668 -4454 298 276 65 108 chr2 183816256 183816320 -69440263 + MIR SINE MIR 78 143 -119 2018 117 0 19 chr2 183816320 183816629 -69439954 + AluSx SINE Alu 1 303 -9 298 276 65 108 chr2 183816629 183816749 -69439834 + MIR SINE MIR 143 254 -8 188 255 43 0 chr2 183817195 183817242 -69439341 - L3 LINE CR1 -9 1568 1520 263 278 0 0 chr2 183817251 183817305 -69439278 - MIR SINE MIR -118 90 37 1036 187 0 0 chr2 183817386 183817552 -69439031 + FRAM SINE Alu 1 166 0 2083 119 10 3 chr2 183817571 183817917 -69438666 + AluSq SINE Alu 1 348 0 2332 77 0 3 chr2 183817965 183818277 -69438306 - AluY SINE Alu 0 311 1 2131 95 3 0 chr2 183818397 183818705 -69437878 - AluSp SINE Alu 0 309 1 405 245 13 64 chr2 183818775 183818851 -69437732 + MLT1H1 LTR MaLR 110 188 -407 750 199 68 12 chr2 183818851 183819012 -69437571 - FAM SINE Alu -5 170 1 405 245 13 64 chr2 183819012 183819117 -69437466 + MLT1H1 LTR MaLR 188 276 -319 3467 160 32 51 chr2 183819127 183819243 -69437340 + L1MB4 LINE L1 5321 5438 -742 1733 161 0 7 chr2 183819243 183819549 -69437034 + AluJb SINE Alu 1 304 0 3467 160 32 51 chr2 183819549 183820101 -69436482 + L1MB4 LINE L1 5438 5977 -203 1638 155 72 70 chr2 183820101 183820253 -69436330 + THE1C LTR MaLR 1 151 -224 2267 89 3 0 chr2 183820253 183820556 -69436027 - AluSp SINE Alu -9 304 1 1638 155 72 70 chr2 183820556 183820777 -69435806 + THE1C LTR MaLR 151 375 0 3467 160 32 51 chr2 183820777 183820854 -69435729 + L1MB4 LINE L1 5977 6054 -126 2468 43 0 46 chr2 183820950 183821276 -69435307 + AluY SINE Alu 1 311 0 605 211 32 5 chr2 183821283 183821493 -69435090 + MLT1H1 LTR MaLR 238 555 0 220 333 96 30 chr2 183822035 183822170 -69434413 + MIR3 SINE MIR 7 150 -58 507 249 57 51 chr2 183822174 183822351 -69434232 + MER5B DNA MER1_type 1 178 0 255 266 62 0 chr2 183822434 183822498 -69434085 - L2 LINE L2 -3 3310 3243 192 97 0 0 chr2 183823114 183823145 -69433438 + (CAAAAA)n Simple_repeat Simple_repeat 3 33 0 964 147 6 0 chr2 183823239 183823396 -69433187 + FRAM SINE Alu 1 158 -18 1893 159 0 0 chr2 183823562 183823857 -69432726 - AluJb SINE Alu -17 295 1 559 264 82 0 chr2 183823946 183824128 -69432455 + L3 LINE CR1 1244 1440 -137 2070 106 13 7 chr2 183824131 183824432 -69432151 - AluSq SINE Alu -10 303 1 203 315 43 11 chr2 183825259 183825351 -69431232 + L3 LINE CR1 1478 1572 -5 331 296 70 70 chr2 183825855 183826068 -69430515 - L2 LINE L2 -464 2850 2638 198 331 97 21 chr2 183826130 183826275 -69430308 - L2 LINE L2 -684 2630 2475 1611 208 26 42 chr2 183826287 183826667 -69429916 - MLT1A2 LTR MaLR 0 374 1 710 266 139 12 chr2 183826689 183826948 -69429635 + L2 LINE L2 3022 3313 0 356 264 98 43 chr2 183827070 183827115 -69429468 - MIR3 SINE MIR -4 204 163 2770 127 23 12 chr2 183827115 183827542 -69429041 - MSTB1 LTR MaLR 0 432 1 356 264 98 43 chr2 183827542 183827659 -69428924 - MIR3 SINE MIR -45 163 33 2717 208 85 11 chr2 183827988 183828637 -69427946 - L1ME2 LINE L1 -2 6162 5466 2374 213 50 41 chr2 183828741 183829541 -69427042 - L1MC5 LINE L1 -101 7860 7054 5468 152 25 57 chr2 183829542 183829698 -69426885 + L1MA10 LINE L1 5171 5330 -1004 2271 99 0 3 chr2 183829698 183830011 -69426572 + AluSx SINE Alu 1 312 0 5468 152 25 57 chr2 183830011 183830137 -69426446 + L1MA10 LINE L1 5330 5458 -876 1699 107 21 4 chr2 183830137 183830380 -69426203 + AluSx SINE Alu 9 255 -57 5468 152 25 57 chr2 183830380 183831244 -69425339 + L1MA10 LINE L1 5458 6284 -50 2059 110 3 0 chr2 183831244 183831535 -69425048 + AluSq SINE Alu 6 297 -16 5468 152 25 57 chr2 183831535 183831578 -69425005 + L1MA10 LINE L1 6284 6327 -7 2182 98 3 3 chr2 183831597 183831893 -69424690 - AluSx SINE Alu -11 301 6 390 220 53 93 chr2 183831910 183832060 -69424523 - L1MC5 LINE L1 -909 7052 6909 395 226 89 122 chr2 183832386 183832656 -69423927 + MIR SINE MIR 2 262 0 343 262 77 26 chr2 183832976 183833142 -69423441 - MIR SINE MIR -51 211 32 1176 262 32 112 chr2 183833190 183833322 -69423261 - L2 LINE L2 0 3313 3172 695 192 0 8 chr2 183833322 183833452 -69423131 + FLAM_A SINE Alu 1 129 -4 1176 262 32 112 chr2 183833452 183833925 -69422658 - L2 LINE L2 -141 3172 2739 522 285 36 30 chr2 183833951 183834288 -69422295 + L1MB3 LINE L1 5593 5931 -252 * 1912 238 47 4 chr2 183833985 183834501 -69422082 + L1ME3A LINE L1 5622 6159 -11 22 0 0 0 chr2 183834933 183834955 -69421628 + AT_rich Low_complexity Low_complexity 1 22 0 349 333 8 31 chr2 183836726 183836855 -69419728 - MIR SINE MIR -45 217 92 2157 85 26 7 chr2 183836989 183837296 -69419287 + AluSp SINE Alu 1 313 0 219 69 0 0 chr2 183837346 183837375 -69419208 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 536 272 39 22 chr2 183837604 183837784 -69418799 - MIR SINE MIR -11 251 69 383 279 162 0 chr2 183840151 183840287 -69416296 - MIR SINE MIR -1 261 104 398 219 8 81 chr2 183840562 183840685 -69415898 + MIR SINE MIR 78 191 -71 228 284 11 57 chr2 183840685 183840773 -69415810 + L2 LINE L2 3215 3298 -15 455 251 144 24 chr2 183841078 183841245 -69415338 - MIR SINE MIR -25 237 51 207 0 0 0 chr2 183841669 183841692 -69414891 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 229 250 0 0 chr2 183842236 183842284 -69414299 - L2 LINE L2 0 3313 3266 493 235 61 0 chr2 183843726 183843841 -69412742 + MIR SINE MIR 119 240 -22 200 111 28 0 chr2 183844049 183844085 -69412498 + (TTGGGG)n Simple_repeat Simple_repeat 4 40 0 852 193 17 11 chr2 183845886 183846062 -69410521 + MER45A DNA AcHobo 1 177 -1 21 36 0 0 chr2 183847326 183847354 -69409229 + AT_rich Low_complexity Low_complexity 1 28 0 29 0 0 0 chr2 183849118 183849147 -69407436 + AT_rich Low_complexity Low_complexity 1 29 0 278 140 35 0 chr2 183849547 183849604 -69406979 + (CATATA)n Simple_repeat Simple_repeat 2 60 0 21 0 0 0 chr2 183851247 183851268 -69405315 + GC_rich Low_complexity Low_complexity 1 21 0 285 151 0 0 chr2 183851519 183851572 -69405011 + (CCG)n Simple_repeat Simple_repeat 2 54 0 242 209 0 15 chr2 183851584 183851743 -69404840 + (CCG)n Simple_repeat Simple_repeat 1 156 0 211 196 0 0 chr2 183851885 183851931 -69404652 + (CCG)n Simple_repeat Simple_repeat 1 46 0 261 0 0 0 chr2 183855692 183855721 -69400862 + (T)n Simple_repeat Simple_repeat 1 29 0 537 138 0 0 chr2 183855933 183856027 -69400556 + (GA)n Simple_repeat Simple_repeat 1 94 0 233 258 0 30 chr2 183856429 183856495 -69400088 + C-rich Low_complexity Low_complexity 4 67 0 300 299 136 0 chr2 183858151 183858298 -69398285 - MIR SINE MIR 0 262 96 255 28 0 28 chr2 183858506 183858542 -69398041 + (TTTG)n Simple_repeat Simple_repeat 2 180 0 2091 97 4 0 chr2 183858542 183858821 -69397762 - AluSx SINE Alu -28 284 5 234 0 0 0 chr2 183860470 183860496 -69396087 + (TTG)n Simple_repeat Simple_repeat 2 27 0 29 70 0 0 chr2 183863886 183863943 -69392640 + GC_rich Low_complexity Low_complexity 1 57 0 239 260 10 40 chr2 183863994 183864094 -69392489 + GA-rich Low_complexity Low_complexity 2 98 0 182 57 0 94 chr2 183864123 183864176 -69392407 + (CCGGG)n Simple_repeat Simple_repeat 3 50 0 21 36 0 0 chr2 183864205 183864233 -69392350 + GC_rich Low_complexity Low_complexity 1 28 0 330 67 0 0 chr2 183864328 183864373 -69392210 + (CGG)n Simple_repeat Simple_repeat 2 46 0 294 29 0 0 chr2 183865653 183865688 -69390895 + (CA)n Simple_repeat Simple_repeat 2 36 0 308 273 103 85 chr2 183866177 183866448 -69390135 - L1M2 LINE L1 -4767 2082 1807 207 0 0 0 chr2 183875018 183875041 -69381542 + (A)n Simple_repeat Simple_repeat 1 23 0 214 241 12 12 chr2 183876634 183876717 -69379866 + GA-rich Low_complexity Low_complexity 1 83 0 194 247 11 35 chr2 183877595 183877769 -69378814 + GA-rich Low_complexity Low_complexity 5 174 0 285 320 0 0 chr2 183878115 183878190 -69378393 + C-rich Low_complexity Low_complexity 3 77 0 21 57 0 0 chr2 183878212 183878247 -69378336 + GC_rich Low_complexity Low_complexity 1 35 0 425 193 7 0 chr2 183878852 183878997 -69377586 + (CGG)n Simple_repeat Simple_repeat 3 148 0 23 0 0 0 chr2 183879015 183879038 -69377545 + GC_rich Low_complexity Low_complexity 1 23 0 29 28 0 0 chr2 183879073 183879109 -69377474 + GC_rich Low_complexity Low_complexity 1 36 0 25 75 0 0 chr2 183879178 183879231 -69377352 + GC_rich Low_complexity Low_complexity 1 53 0 28 29 0 0 chr2 183879434 183879469 -69377114 + GC_rich Low_complexity Low_complexity 1 35 0 180 0 0 0 chr2 183879675 183879695 -69376888 + (GGGA)n Simple_repeat Simple_repeat 2 21 0 351 0 0 0 chr2 183879930 183879969 -69376614 + (TG)n Simple_repeat Simple_repeat 2 40 0 207 0 0 0 chr2 183883097 183883120 -69373463 + (A)n Simple_repeat Simple_repeat 1 23 0 303 93 0 0 chr2 183886402 183886445 -69370138 + (TGG)n Simple_repeat Simple_repeat 1 43 0 410 60 0 30 chr2 183890116 183890183 -69366400 + (CAAAAA)n Simple_repeat Simple_repeat 2 66 0 270 0 0 0 chr2 183890706 183890736 -69365847 + (TA)n Simple_repeat Simple_repeat 1 30 0 198 0 0 0 chr2 183890834 183890856 -69365727 + (TCCA)n Simple_repeat Simple_repeat 1 22 0 21 57 0 0 chr2 183893250 183893285 -69363298 + GC_rich Low_complexity Low_complexity 1 35 0 231 114 0 0 chr2 183893793 183893828 -69362755 + (CCGGG)n Simple_repeat Simple_repeat 2 36 0 222 136 0 0 chr2 183894559 183894603 -69361980 + (TCC)n Simple_repeat Simple_repeat 1 44 0 208 279 0 16 chr2 183895125 183895186 -69361397 + C-rich Low_complexity Low_complexity 3 62 0 324 0 0 0 chr2 183899034 183899070 -69357513 + (CA)n Simple_repeat Simple_repeat 2 37 0 213 169 31 46 chr2 183901067 183901132 -69355451 + G-rich Low_complexity Low_complexity 1 64 0 24 56 0 42 chr2 183901305 183901376 -69355207 + GC_rich Low_complexity Low_complexity 1 68 0 31 0 0 0 chr2 183901596 183901627 -69354956 + GC_rich Low_complexity Low_complexity 1 31 0 228 35 0 0 chr2 183901678 183901707 -69354876 + (CGG)n Simple_repeat Simple_repeat 2 30 0 216 196 0 0 chr2 183901959 183902005 -69354578 + CT-rich Low_complexity Low_complexity 1 46 0 22 0 0 0 chr2 183903282 183903304 -69353279 + AT_rich Low_complexity Low_complexity 1 22 0 420 20 0 0 chr2 183907421 183907470 -69349113 + (CA)n Simple_repeat Simple_repeat 2 50 0 238 163 22 43 chr2 183907522 183907614 -69348969 + GA-rich Low_complexity Low_complexity 4 93 0 22 80 0 0 chr2 183907942 183907992 -69348591 + GC_rich Low_complexity Low_complexity 1 50 0 237 65 0 0 chr2 183911623 183911654 -69344929 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 241 302 103 17 chr2 183912707 183912823 -69343760 - MER5A DNA MER1_type -1 188 63 * 475 268 0 49 chr2 183912739 183912881 -69343702 + MER5A DNA MER1_type 55 189 0 347 276 104 15 chr2 183913088 183913222 -69343361 + MIR SINE MIR 40 185 -77 212 125 42 62 chr2 183913239 183913287 -69343296 - MIR SINE MIR -29 233 187 209 261 31 0 chr2 183915218 183915283 -69341300 + GA-rich Low_complexity Low_complexity 3 69 0 2306 86 0 7 chr2 183915649 183915940 -69340643 - AluSg SINE Alu 0 310 22 200 94 31 0 chr2 183919650 183919682 -69336901 + (GGGTG)n Simple_repeat Simple_repeat 3 35 0 249 33 0 0 chr2 183921340 183921370 -69335213 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 303 122 0 0 chr2 183921871 183921920 -69334663 + (GA)n Simple_repeat Simple_repeat 2 50 0 21 71 0 0 chr2 183923198 183923240 -69333343 + GC_rich Low_complexity Low_complexity 1 42 0 21 57 0 0 chr2 183923764 183923799 -69332784 + GC_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 183925840 183925861 -69330722 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr2 183928410 183928440 -69328143 + GC_rich Low_complexity Low_complexity 1 30 0 37 62 0 0 chr2 183928656 183928721 -69327862 + GC_rich Low_complexity Low_complexity 1 65 0 238 261 0 0 chr2 183928916 183928969 -69327614 + (TG)n Simple_repeat Simple_repeat 1 56 -13 219 69 0 0 chr2 183928969 183928998 -69327585 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 238 261 0 0 chr2 183928998 183929013 -69327570 + (TG)n Simple_repeat Simple_repeat 55 69 0 225 65 0 0 chr2 183929845 183929876 -69326707 + (TG)n Simple_repeat Simple_repeat 2 32 0 208 150 25 0 chr2 183930079 183930119 -69326464 + (CACCC)n Simple_repeat Simple_repeat 4 44 0 208 217 0 22 chr2 183932069 183932115 -69324468 + (CGGG)n Simple_repeat Simple_repeat 2 46 0 30 0 0 0 chr2 183934126 183934156 -69322427 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr2 183936683 183936706 -69319877 + GC_rich Low_complexity Low_complexity 1 23 0 261 0 0 0 chr2 183938957 183938986 -69317597 + (T)n Simple_repeat Simple_repeat 1 29 0 504 269 67 0 chr2 183939078 183939212 -69317371 - L2 LINE L2 0 3313 3171 879 129 0 0 chr2 183939414 183939546 -69317037 + FLAM_C SINE Alu 2 133 0 2130 105 4 4 chr2 183939560 183939858 -69316725 + AluSq SINE Alu 6 303 0 615 150 10 0 chr2 183940040 183940140 -69316443 + FRAM SINE Alu 43 143 -33 192 77 0 0 chr2 183940143 183940169 -69316414 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 205 250 0 0 chr2 183940730 183940778 -69315805 + C-rich Low_complexity Low_complexity 4 51 0 475 256 208 36 chr2 183940990 183941264 -69315319 - L3 LINE CR1 -17 1560 1240 666 258 66 24 chr2 183941345 183941558 -69315025 - MIR SINE MIR -38 224 3 247 146 36 0 chr2 183942170 183942225 -69314358 + (TTTG)n Simple_repeat Simple_repeat 4 60 0 21 0 0 0 chr2 183944469 183944490 -69312093 + AT_rich Low_complexity Low_complexity 1 21 0 994 104 8 0 chr2 183948239 183948373 -69308210 + AluSp/q SINE Alu 174 308 -5 281 324 127 46 chr2 183950835 183951159 -69305424 - L2 LINE L2 -9 3263 2914 309 311 210 22 chr2 183951240 183951607 -69304976 - L2 LINE L2 -528 2786 2351 435 356 44 0 chr2 183951623 183951803 -69304780 + MIR SINE MIR 59 246 -16 21 0 0 0 chr2 183952088 183952109 -69304474 + AT_rich Low_complexity Low_complexity 1 21 0 986 279 174 29 chr2 183952351 183952686 -69303897 + L1MC4a LINE L1 5437 5722 -2086 1740 179 7 20 chr2 183952686 183952988 -69303595 + AluJb SINE Alu 1 298 -14 986 279 174 29 chr2 183952988 183953248 -69303335 + L1MC4a LINE L1 5722 6119 -1689 2226 130 3 0 chr2 183953307 183953615 -69302968 + AluSx SINE Alu 1 309 -3 1142 84 30 0 chr2 183953620 183953786 -69302797 + L1PA13 LINE L1 5993 6163 0 233 292 0 0 chr2 183954311 183954383 -69302200 + MIR3 SINE MIR 123 194 -14 879 176 0 0 chr2 183955025 183955161 -69301422 + AluJo SINE Alu 1 136 -176 1943 128 0 0 chr2 183955778 183956058 -69300525 + AluSx SINE Alu 27 306 0 2048 136 0 3 chr2 183956773 183957067 -69299516 - AluSg SINE Alu -17 293 1 189 0 0 0 chr2 183957160 183957181 -69299402 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 2216 40 0 0 chr2 183957854 183958103 -69298480 + AluY SINE Alu 1 249 -62 182 61 0 30 chr2 183958103 183958136 -69298447 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 305 316 119 63 chr2 183960166 183960231 -69296352 + L1M2 LINE L1 653 713 -6136 219 256 0 37 chr2 183960231 183960313 -69296270 + C-rich Low_complexity Low_complexity 3 81 0 305 316 119 63 chr2 183960313 183960501 -69296082 + L1M2 LINE L1 713 1006 -5843 2216 103 0 13 chr2 183962293 183962593 -69293990 - AluSx SINE Alu -16 296 1 215 254 0 32 chr2 183964159 183964222 -69292361 + MIR3 SINE MIR 147 207 -1 571 224 109 0 chr2 183965534 183965681 -69290902 - MER69A DNA AcHobo -14 163 1 827 203 0 0 chr2 183966109 183966237 -69290346 - FLAM_A SINE Alu -4 129 2 1709 87 18 4 chr2 183966248 183966477 -69290106 - AluY SINE Alu -13 298 67 2386 73 7 10 chr2 183967198 183967500 -69289083 + AluSg SINE Alu 1 301 -9 770 168 39 39 chr2 183967523 183967702 -69288881 + MLT1C LTR MaLR 109 287 -180 1834 161 49 85 chr2 183968493 183968941 -69287642 - MSTB1 LTR MaLR 0 432 1 2040 128 7 3 chr2 183969262 183969566 -69287017 - AluSx SINE Alu -7 305 1 229 343 146 15 chr2 183969705 183969842 -69286741 - L2 LINE L2 -1 3271 3117 23 0 0 0 chr2 183971282 183971305 -69285278 + AT_rich Low_complexity Low_complexity 1 23 0 2546 54 0 0 chr2 183971629 183971927 -69284656 + AluY SINE Alu 1 298 -13 929 215 96 83 chr2 183971972 183972080 -69284503 - MLT1J LTR MaLR -2 509 404 2142 100 13 17 chr2 183972080 183972380 -69284203 + AluSx SINE Alu 1 299 -13 929 215 96 83 chr2 183972380 183972677 -69283906 - MLT1J LTR MaLR -107 404 20 2577 54 0 10 chr2 183972871 183973185 -69283398 + AluY SINE Alu 1 311 0 190 374 24 0 chr2 183973578 183973661 -69282922 + L2 LINE L2 2588 2672 -642 245 314 107 31 chr2 183973875 183974034 -69282549 + L2 LINE L2 2917 3087 -185 2325 113 0 0 chr2 183974506 183974816 -69281767 - AluSx SINE Alu -2 310 1 356 323 38 0 chr2 183975048 183975181 -69281402 + MIR SINE MIR 89 226 -36 2402 77 3 0 chr2 183975950 183976260 -69280323 + AluY SINE Alu 1 311 0 2457 87 0 0 chr2 183976598 183976898 -69279685 + AluSp SINE Alu 1 300 -13 206 137 20 39 chr2 183977609 183977633 -69278950 + (TTTA)n Simple_repeat Simple_repeat 2 25 -26 1102 156 0 45 chr2 183977633 183977812 -69278771 - FAM SINE Alu -4 171 1 206 137 20 39 chr2 183977812 183977838 -69278745 + (TTTA)n Simple_repeat Simple_repeat 25 51 0 703 197 96 46 chr2 183977928 183978167 -69278416 + HAL1b LINE L1 1003 1253 -95 22 0 0 0 chr2 183978755 183978777 -69277806 + AT_rich Low_complexity Low_complexity 1 22 0 1683 171 27 17 chr2 183979520 183979812 -69276771 - AluJb SINE Alu -17 295 1 2199 99 3 0 chr2 183981316 183981622 -69274961 + AluSq SINE Alu 1 307 0 2116 226 96 14 chr2 183981858 183982359 -69274224 - MLT1F LTR MaLR 0 542 1 1670 179 10 16 chr2 183982828 183983136 -69273447 + AluJo SINE Alu 1 306 -6 1145 196 0 13 chr2 183984443 183984667 -69271916 - AluJo SINE Alu -7 305 85 540 177 0 0 chr2 183984667 183984746 -69271837 - AluSg/x SINE Alu -62 248 170 829 153 0 0 chr2 183984749 183984867 -69271716 - AluJo/FLAM SINE Alu -194 118 1 21 36 0 0 chr2 183984901 183984929 -69271654 + AT_rich Low_complexity Low_complexity 1 28 0 2357 92 7 0 chr2 183985030 183985335 -69271248 - AluSg SINE Alu -3 307 1 1738 180 15 77 chr2 183985382 183985619 -69270964 - MLT1A1 LTR MaLR 0 365 159 2380 29 7 4 chr2 183985619 183985939 -69270644 + AluY SINE Alu 1 321 0 1738 180 15 77 chr2 183985939 183986089 -69270494 - MLT1A1 LTR MaLR -206 159 1 2025 138 3 7 chr2 183986592 183986897 -69269686 - AluSx SINE Alu -8 304 1 1266 166 98 11 chr2 183987181 183987446 -69269137 - AluJo SINE Alu -24 288 1 2278 100 0 0 chr2 183987504 183987794 -69268789 - AluSg SINE Alu -20 290 1 455 264 41 64 chr2 183987917 183988137 -69268446 + L1ME LINE L1 5573 5787 -334 329 260 69 110 chr2 183988419 183988592 -69267991 - MIR SINE MIR -30 232 67 1853 125 7 14 chr2 183991811 183992092 -69264491 - AluSx SINE Alu -11 301 23 1084 134 0 0 chr2 183992192 183992349 -69264234 + AluSg/x SINE Alu 155 311 -1 274 279 101 0 chr2 183992690 183992769 -69263814 - L2 LINE L2 -27 3286 3200 256 313 31 39 chr2 183993021 183993149 -69263434 + MIR SINE MIR 28 154 -108 1372 195 26 17 chr2 183994505 183994811 -69261772 - MLT1D LTR MaLR -3 502 215 1324 87 17 0 chr2 183994816 183994988 -69261595 - AluSx SINE Alu -15 295 121 2187 104 0 25 chr2 183994997 183995313 -69261270 - AluSg SINE Alu 0 310 3 180 97 0 0 chr2 183995326 183995357 -69261226 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 7564 55 1 0 chr2 183995364 183996780 -69259803 - L1PA6 LINE L1 -3 6151 4732 32949 74 6 31 chr2 183996939 184001751 -69254832 - L1P2 LINE L1 -622 5532 847 727 68 0 0 chr2 184001749 184001837 -69254746 - L1P2 LINE L1 -6048 98 11 * 1080 104 0 0 chr2 184001989 184002124 -69254459 - AluSx SINE Alu -177 135 1 630 191 76 76 chr2 184002128 184002285 -69254298 - MLT1D LTR MaLR -442 184 28 2060 117 0 33 chr2 184002593 184002900 -69253683 + AluSx SINE Alu 1 297 -15 333 82 0 0 chr2 184003863 184003912 -69252671 + (TG)n Simple_repeat Simple_repeat 2 50 0 1418 204 48 0 chr2 184003916 184004185 -69252398 - AluJb SINE Alu -30 282 1 1207 226 115 64 chr2 184004276 184004744 -69251839 + MLT1F1 LTR MaLR 76 567 0 596 291 97 30 chr2 184004784 184005114 -69251469 - L1ME4a LINE L1 -81 6040 5689 684 144 0 0 chr2 184005569 184005673 -69250910 - L1MB3 LINE L1 -10 6173 6070 572 318 46 8 chr2 184005787 184006026 -69250557 + MIR SINE MIR 12 259 -3 222 91 0 0 chr2 184006375 184006408 -69250175 + (GA)n Simple_repeat Simple_repeat 2 34 0 247 294 33 22 chr2 184006550 184006642 -69249941 - MIR SINE MIR -81 127 35 483 242 60 0 chr2 184006769 184006918 -69249665 + LTR33 LTR ERVL 1 158 -363 578 224 14 35 chr2 184007065 184007208 -69249375 + LTR33 LTR ERVL 382 521 0 1613 161 98 0 chr2 184007365 184007639 -69248944 + AluJo SINE Alu 1 301 -11 2049 164 33 86 chr2 184007946 184008402 -69248181 - MSTB1 LTR MaLR 0 432 1 2040 128 7 3 chr2 184008723 184009027 -69247556 - AluSx SINE Alu -7 305 1 229 375 140 0 chr2 184009166 184009302 -69247281 - L2 LINE L2 -1 3271 3117 300 237 113 21 chr2 184011206 184011303 -69245280 + L2 LINE L2 3199 3304 -9 2016 163 55 14 chr2 184011762 184012180 -69244403 - MER45B DNA AcHobo 0 1040 606 1255 224 82 0 chr2 184012198 184012502 -69244081 - MER45B DNA AcHobo -711 329 1 25 31 0 0 chr2 184012671 184012703 -69243880 + AT_rich Low_complexity Low_complexity 1 32 0 22 35 0 0 chr2 184012876 184012905 -69243678 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 184012918 184012940 -69243643 + AT_rich Low_complexity Low_complexity 1 22 0 25 51 0 0 chr2 184013294 184013333 -69243250 + AT_rich Low_complexity Low_complexity 1 39 0 23 0 0 0 chr2 184013558 184013581 -69243002 + AT_rich Low_complexity Low_complexity 1 23 0 27 0 0 0 chr2 184013735 184013762 -69242821 + AT_rich Low_complexity Low_complexity 1 27 0 3233 159 41 15 chr2 184013762 184014417 -69242166 - L1MA7 LINE L1 0 6291 5620 1511 200 136 46 chr2 184014633 184015268 -69241315 - L1MC5 LINE L1 -35 7926 7246 2178 126 0 7 chr2 184015284 184015585 -69240998 - AluSx SINE Alu -13 299 1 185 255 21 0 chr2 184015647 184015694 -69240889 + L2 LINE L2 2613 2660 -654 307 296 82 20 chr2 184015749 184015945 -69240638 - MLT1H LTR MaLR -113 436 229 216 0 0 0 chr2 184017479 184017503 -69239080 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 1890 138 10 10 chr2 184017682 184017973 -69238610 - AluJo SINE Alu -19 293 3 298 329 12 0 chr2 184017981 184018066 -69238517 + MIR3 SINE MIR 87 172 -36 1743 161 10 27 chr2 184018287 184018586 -69237997 - AluSx SINE Alu -15 297 4 257 206 15 0 chr2 184019768 184019836 -69236747 - L1ME2 LINE L1 -10 6154 6086 1291 106 90 201 chr2 184019855 184020234 -69236349 + MER1B DNA MER1_type 1 337 0 657 296 77 4 chr2 184020234 184020467 -69236116 + L2 LINE L2 1040 1289 -2025 634 226 226 8 chr2 184020475 184020710 -69235873 - MER5C DNA MER1_type 0 324 39 3335 255 114 20 chr2 184020757 184021877 -69234706 + L2 LINE L2 1296 2521 -793 239 329 105 64 chr2 184021900 184022195 -69234388 - L2 LINE L2 -2781 533 227 1643 117 55 4 chr2 184022378 184022652 -69233931 + L1MB3 LINE L1 5895 6182 -1 408 285 86 54 chr2 184022744 184022930 -69233653 - MIR SINE MIR -50 212 21 376 328 41 16 chr2 184024599 184024721 -69231862 + MIR3 SINE MIR 34 158 -50 188 310 10 60 chr2 184025684 184025784 -69230799 + L2 LINE L2 2182 2276 -1038 7294 124 36 11 chr2 184025851 184026584 -69229999 - L1PBa LINE L1 -4121 2742 1958 2101 98 37 17 chr2 184026584 184026881 -69229702 - AluSx SINE Alu -9 303 1 7294 124 36 11 chr2 184026881 184027464 -69229119 - L1PBa LINE L1 -4905 1958 1392 317 346 10 0 chr2 184027958 184028062 -69228521 + L2 LINE L2 3204 3308 -5 282 303 68 38 chr2 184028664 184028796 -69227787 - L2 LINE L2 -609 2705 2570 2168 109 0 0 chr2 184029122 184029429 -69227154 + AluSx SINE Alu 1 307 0 1121 299 110 32 chr2 184029476 184030078 -69226505 + L1MEd LINE L1 141 789 -5330 2437 81 0 0 chr2 184030116 184030412 -69226171 - AluSq SINE Alu -17 296 1 583 217 25 13 chr2 184032141 184032298 -69224285 - MER103 DNA DNA -7 159 1 260 361 107 21 chr2 184032452 184032743 -69223840 + L2 LINE L2 2034 2349 -965 2677 24 0 0 chr2 184033004 184033301 -69223282 - AluY SINE Alu -14 297 1 582 306 18 7 chr2 184033405 184033793 -69222790 + L1M4 LINE L1 4315 4704 -1442 4874 182 40 77 chr2 184033849 184034007 -69222576 + L1MC4 LINE L1 5941 6103 -1939 1784 155 0 44 chr2 184034007 184034182 -69222401 - AluJo SINE Alu -4 308 152 2196 114 3 0 chr2 184034182 184034480 -69222103 - AluSx SINE Alu -13 299 1 1784 155 0 44 chr2 184034480 184034620 -69221963 - AluJo SINE Alu -160 152 7 4874 182 40 77 chr2 184034620 184035302 -69221281 + L1MC4 LINE L1 6103 6808 -1234 2232 127 0 6 chr2 184035302 184035616 -69220967 - AluSx SINE Alu 0 312 1 4874 182 40 77 chr2 184035616 184036823 -69219760 + L1MC4 LINE L1 6808 8041 -1 250 135 0 0 chr2 184036995 184037032 -69219551 + tRNA-Met-i tRNA tRNA 1 37 -38 25 31 0 0 chr2 184037233 184037265 -69219318 + AT_rich Low_complexity Low_complexity 1 32 0 285 364 68 25 chr2 184038346 184038508 -69218075 + L2 LINE L2 3104 3272 0 2538 59 0 0 chr2 184038951 184039257 -69217326 - AluY SINE Alu -5 306 1 23 0 0 0 chr2 184040101 184040124 -69216459 + AT_rich Low_complexity Low_complexity 1 23 0 2078 115 7 3 chr2 184040124 184040411 -69216172 - AluSx SINE Alu -24 288 1 306 314 0 25 chr2 184040495 184040613 -69215970 + L1MC4 LINE L1 6614 6728 -1314 297 0 0 0 chr2 184041215 184041248 -69215335 + (TA)n Simple_repeat Simple_repeat 2 34 0 192 40 0 0 chr2 184041248 184041273 -69215310 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1178 123 250 9 chr2 184041275 184041503 -69215080 - AluJb SINE Alu -19 283 1 328 304 45 45 chr2 184041551 184041817 -69214766 + MLT1K LTR MaLR 158 423 -165 1932 129 181 8 chr2 184042511 184042875 -69213708 + MSTA LTR MaLR 2 428 0 22 56 0 0 chr2 184043302 184043338 -69213245 + AT_rich Low_complexity Low_complexity 1 36 0 1666 184 33 33 chr2 184043770 184044135 -69212448 + MLT1A1 LTR MaLR 1 365 0 2051 107 0 0 chr2 184044948 184045211 -69211372 + AluSg SINE Alu 1 263 -47 309 273 55 18 chr2 184045761 184045871 -69210712 + MIR SINE MIR 90 203 -59 316 261 23 11 chr2 184045882 184045970 -69210613 + L1MC4 LINE L1 6615 6703 -1339 304 279 109 111 chr2 184046082 184046616 -69209967 - L1M2 LINE L1 -5700 1149 519 180 232 179 0 chr2 184046617 184046673 -69209910 - MIR SINE MIR -62 146 81 1205 98 0 0 chr2 184046974 184047137 -69209446 - AluSq SINE Alu -12 301 139 296 237 258 0 chr2 184047561 184047654 -69208929 + L2 LINE L2 3183 3299 -14 348 288 50 45 chr2 184048033 184048231 -69208352 + L1MC/D LINE L1 4967 5165 -981 444 279 114 27 chr2 184048233 184048670 -69207913 + L1MC/D LINE L1 5270 5753 -774 3243 138 28 43 chr2 184048684 184049353 -69207230 + L1MA7 LINE L1 5621 6279 -12 1385 249 79 5 chr2 184049721 184050090 -69206493 - MSTD LTR MaLR 0 396 1 436 376 0 6 chr2 184050524 184050689 -69205894 + L2 LINE L2 2538 2701 -613 304 278 86 53 chr2 184051110 184051297 -69205286 - L1ME4a LINE L1 -193 5928 5736 235 133 44 0 chr2 184051297 184051342 -69205241 - MLT2F LTR ERVL -2 661 615 598 186 15 34 chr2 184051525 184051702 -69204881 - MLT1E1 LTR MaLR -389 265 52 409 279 50 7 chr2 184051707 184051847 -69204736 - MLT2F LTR ERVL -517 146 1 2107 141 0 0 chr2 184052046 184052343 -69204240 - AluSq SINE Alu -16 297 1 27 29 0 0 chr2 184052374 184052408 -69204175 + AT_rich Low_complexity Low_complexity 1 34 0 478 246 49 35 chr2 184052757 184052899 -69203684 + MIR SINE MIR 26 169 -93 338 277 356 0 chr2 184053271 184053459 -69203124 + MIR SINE MIR 8 262 0 24 0 0 0 chr2 184053802 184053826 -69202757 + AT_rich Low_complexity Low_complexity 1 24 0 2299 95 3 0 chr2 184054210 184054506 -69202077 - AluSp SINE Alu -16 297 1 2452 97 0 0 chr2 184054846 184055155 -69201428 - AluSx SINE Alu -3 309 1 22 0 0 0 chr2 184056318 184056340 -69200243 + AT_rich Low_complexity Low_complexity 1 22 0 36 0 0 0 chr2 184056637 184056673 -69199910 + AT_rich Low_complexity Low_complexity 1 36 0 1786 241 60 22 chr2 184057229 184057332 -69199251 - MLT1G LTR MaLR -6 584 486 3956 145 30 11 chr2 184057332 184058036 -69198547 - LTR62 LTR ERVK -2 717 1 1786 241 60 22 chr2 184058036 184058430 -69198153 - MLT1G LTR MaLR -104 486 68 252 0 0 0 chr2 184058930 184058958 -69197625 + (T)n Simple_repeat Simple_repeat 1 28 0 374 255 94 19 chr2 184059015 184059121 -69197462 - L2 LINE L2 -16 3297 3184 200 370 0 19 chr2 184059269 184059377 -69197206 + L2 LINE L2 2966 3071 -201 501 332 26 22 chr2 184059445 184059501 -69197082 - MIR SINE MIR -13 249 195 2261 115 0 3 chr2 184059501 184059806 -69196777 - AluSg SINE Alu -6 304 1 501 332 26 22 chr2 184059806 184059978 -69196605 - MIR SINE MIR -67 195 20 787 188 0 0 chr2 184060915 184061048 -69195535 - FLAM_A SINE Alu 0 133 1 349 298 133 32 chr2 184061655 184061813 -69194770 + MER5A DNA MER1_type 16 189 0 854 170 80 37 chr2 184061910 184062098 -69194485 + MIR SINE MIR 25 220 -42 3955 155 52 80 chr2 184062129 184063072 -69193511 - L1MB7 LINE L1 -12 6172 5256 2407 77 3 0 chr2 184063355 184063653 -69192930 - AluSq SINE Alu -14 299 1 362 314 51 0 chr2 184063960 184064078 -69192505 + L2 LINE L2 3188 3311 -2 1405 150 4 17 chr2 184064159 184064393 -69192190 + MER46A DNA MER2_type 6 236 0 310 206 137 48 chr2 184067993 184068139 -69188444 - Charlie7 DNA MER1_type -22 2590 2432 420 295 137 71 chr2 184068335 184068560 -69188023 - L2 LINE L2 -5 3267 3058 730 203 95 0 chr2 184068560 184068718 -69187865 - MER45A DNA AcHobo -1 177 5 420 295 137 71 chr2 184068718 184069009 -69187574 - L2 LINE L2 -214 3058 2721 2371 132 44 7 chr2 184070350 184070759 -69185824 + MSTB LTR MaLR 1 424 -2 2091 101 24 3 chr2 184071238 184071535 -69185048 - AluSg1 SINE Alu -6 303 1 226 43 0 149 chr2 184071684 184071731 -69184852 + HSMAR1 DNA Mariner 3 42 -1245 22 0 0 0 chr2 184073400 184073422 -69183161 + AT_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr2 184074653 184074685 -69181898 + AT_rich Low_complexity Low_complexity 1 32 0 27 29 0 0 chr2 184075056 184075090 -69181493 + AT_rich Low_complexity Low_complexity 1 34 0 182 368 0 0 chr2 184075586 184075643 -69180940 + L2 LINE L2 3213 3269 -3 763 215 8 84 chr2 184076029 184076266 -69180317 + MER20 DNA MER1_type 1 219 0 192 40 0 0 chr2 184077093 184077118 -69179465 + (GA)n Simple_repeat Simple_repeat 2 26 0 1260 203 66 3 chr2 184077231 184077532 -69179051 - MER33 DNA MER1_type -4 320 1 490 189 6 161 chr2 184077690 184077870 -69178713 + MIR SINE MIR 111 262 0 459 293 14 14 chr2 184078116 184078263 -69178320 - MIR SINE MIR -6 256 110 430 250 28 0 chr2 184078312 184078420 -69178163 - MIR SINE MIR 0 262 152 832 194 16 47 chr2 184078439 184078630 -69177953 - MIR SINE MIR -76 186 2 249 276 48 38 chr2 184078762 184078867 -69177716 + MIR SINE MIR 116 221 -41 226 167 0 0 chr2 184078984 184079020 -69177563 - tRNA-Arg-AGA tRNA tRNA -38 38 3 2163 125 0 3 chr2 184079392 184079697 -69176886 - AluSx SINE Alu -8 304 1 33 43 0 0 chr2 184080148 184080195 -69176388 + AT_rich Low_complexity Low_complexity 1 47 0 22 35 0 0 chr2 184082223 184082252 -69174331 + AT_rich Low_complexity Low_complexity 1 29 0 201 299 45 30 chr2 184082471 184082538 -69174045 - L2 LINE L2 -71 3201 3134 32997 121 34 9 chr2 184082883 184088866 -69167717 - L1PA6 LINE L1 -10 6144 12 257 280 187 19 chr2 184089123 184089230 -69167353 - L2 LINE L2 -5 3308 3184 2278 103 6 3 chr2 184089415 184089726 -69166857 + AluSq SINE Alu 1 312 -1 23 54 0 0 chr2 184089828 184089865 -69166718 + AT_rich Low_complexity Low_complexity 1 37 0 253 282 39 0 chr2 184090003 184090081 -69166502 - MIR SINE MIR 0 262 182 2132 130 3 3 chr2 184090219 184090526 -69166057 - AluSx SINE Alu -5 307 1 1943 141 3 14 chr2 184090985 184091282 -69165301 + AluSx SINE Alu 1 294 -18 1759 295 101 11 chr2 184092081 184092943 -69163640 + L2 LINE L2 2365 3305 -8 201 74 0 0 chr2 184093216 184093243 -69163340 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1746 154 10 10 chr2 184093245 184093537 -69163046 - AluJb SINE Alu -20 292 1 595 307 49 35 chr2 184093539 184093826 -69162757 - L1MC4a LINE L1 -1983 5825 5535 21 57 0 0 chr2 184093867 184093902 -69162681 + AT_rich Low_complexity Low_complexity 1 35 0 183 239 0 0 chr2 184094033 184094079 -69162504 + CT-rich Low_complexity Low_complexity 4 49 0 228 191 362 0 chr2 184094094 184094199 -69162384 + MIR SINE MIR 110 252 -10 931 271 181 46 chr2 184094206 184095057 -69161526 - HAL1 LINE L1 -1536 971 6 1061 133 55 22 chr2 184095663 184095844 -69160739 + MER3 DNA MER1_type 23 209 0 813 192 41 68 chr2 184096293 184096401 -69160182 - AluJo SINE Alu -71 241 140 2167 108 0 0 chr2 184096401 184096696 -69159887 - AluSg SINE Alu -3 307 13 813 192 41 68 chr2 184096696 184096806 -69159777 - AluJo SINE Alu -172 140 29 582 148 0 0 chr2 184097007 184097095 -69159488 + AluSg/x SINE Alu 206 293 -17 21 71 0 0 chr2 184097200 184097242 -69159341 + AT_rich Low_complexity Low_complexity 1 42 0 200 378 54 9 chr2 184097278 184097389 -69159194 + L2 LINE L2 1307 1422 -1892 1781 177 3 16 chr2 184097517 184097833 -69158750 - AluJb SINE Alu 0 312 1 247 164 200 18 chr2 184098036 184098091 -69158492 + MER5A DNA MER1_type 123 187 -2 1025 261 183 18 chr2 184098261 184098698 -69157885 - MLT1J LTR MaLR 0 511 3 449 249 42 36 chr2 184099500 184099693 -69156890 - L1ME4a LINE L1 -218 5903 5710 30 27 0 0 chr2 184100873 184100910 -69155673 + AT_rich Low_complexity Low_complexity 1 37 0 476 258 82 44 chr2 184101852 184102011 -69154572 + MIR3 SINE MIR 37 201 -7 322 285 16 65 chr2 184104224 184104410 -69152173 - L1ME3A LINE L1 -232 5938 5762 543 264 82 78 chr2 184104432 184104883 -69151700 - L1ME LINE L1 -322 5799 5347 21 0 0 0 chr2 184104983 184105004 -69151579 + AT_rich Low_complexity Low_complexity 1 21 0 336 102 0 0 chr2 184106718 184106767 -69149816 + (TCTA)n Simple_repeat Simple_repeat 4 52 0 24 77 0 0 chr2 184107283 184107335 -69149248 + AT_rich Low_complexity Low_complexity 1 52 0 25 51 0 0 chr2 184108234 184108273 -69148310 + AT_rich Low_complexity Low_complexity 1 39 0 186 309 0 0 chr2 184109228 184109270 -69147313 + MIR SINE MIR 32 73 -135 461 222 11 21 chr2 184110218 184110344 -69146239 - L1ME1 LINE L1 0 6334 6052 1659 167 40 57 chr2 184110473 184110827 -69145756 + MER7A DNA MER2_type 1 346 0 324 303 91 45 chr2 184111579 184111711 -69144872 - L2 LINE L2 -19 3253 3116 824 308 125 23 chr2 184111739 184112470 -69144113 - L2 LINE L2 0 3313 2505 1491 274 78 65 chr2 184112614 184113278 -69143305 - L2 LINE L2 -460 2854 2182 223 328 0 10 chr2 184113289 184113355 -69143228 - MIR SINE MIR -111 97 34 440 231 22 11 chr2 184114166 184114257 -69142326 + MER2 DNA MER2_type 6 97 -248 507 143 41 41 chr2 184114293 184114391 -69142192 + MER2 DNA MER2_type 85 182 -163 1486 194 0 0 chr2 184114391 184114639 -69141944 - AluJb SINE Alu -64 248 1 294 273 0 0 chr2 184114664 184114730 -69141853 + MER2 DNA MER2_type 280 345 0 547 202 117 7 chr2 184116584 184116728 -69139855 - MIR SINE MIR -63 145 19 1515 147 28 53 chr2 184116734 184117054 -69139529 - AluJb SINE Alu 0 312 1 189 0 0 0 chr2 184117078 184117099 -69139484 + (T)n Simple_repeat Simple_repeat 1 21 0 1730 195 0 0 chr2 184117456 184117753 -69138830 - AluJb SINE Alu -15 297 1 23 0 0 0 chr2 184118117 184118140 -69138443 + AT_rich Low_complexity Low_complexity 1 23 0 1991 132 43 12 chr2 184118354 184118680 -69137903 - MER1B DNA MER1_type 0 337 2 21 36 0 0 chr2 184118966 184118994 -69137589 + AT_rich Low_complexity Low_complexity 1 28 0 5105 232 73 48 chr2 184119151 184120631 -69135952 - L1MCc LINE L1 -1898 5043 3602 2118 128 0 0 chr2 184120631 184120936 -69135647 + AluSx SINE Alu 1 305 -7 5105 232 73 48 chr2 184120936 184121350 -69135233 - L1MCc LINE L1 -3339 3602 3095 1852 140 31 0 chr2 184121350 184121642 -69134941 - AluSx SINE Alu -11 301 1 5105 232 73 48 chr2 184121642 184121704 -69134879 - L1MCc LINE L1 -3846 3095 3036 708 136 8 30 chr2 184121705 184121837 -69134746 - FLAM_C SINE Alu -2 141 13 781 225 99 30 chr2 184121853 184121914 -69134669 - L1MCc LINE L1 -3903 3038 2983 1686 140 26 63 chr2 184121914 184122264 -69134319 + MER1B DNA MER1_type 1 337 0 781 225 99 30 chr2 184122264 184122515 -69134068 - L1MCc LINE L1 -3958 2983 2736 1425 169 19 22 chr2 184122526 184122839 -69133744 - L1M4 LINE L1 -929 5217 4906 436 285 90 38 chr2 184122890 184123346 -69133237 - L1MCc LINE L1 -5701 721 1 1236 280 97 38 chr2 184123652 184124311 -69132272 - L1ME3 LINE L1 -97 6065 5333 360 43 0 0 chr2 184124311 184124357 -69132226 + (TG)n Simple_repeat Simple_repeat 1 46 0 1236 280 97 38 chr2 184124357 184124624 -69131959 - L1ME3 LINE L1 -829 5333 5083 2113 106 0 7 chr2 184124834 184125138 -69131445 + AluSg SINE Alu 1 302 0 386 331 24 11 chr2 184125440 184125689 -69130894 - L1ME3 LINE L1 -1521 4625 4377 1911 122 0 0 chr2 184125940 184126210 -69130373 - AluSg SINE Alu -2 308 39 511 303 82 29 chr2 184126270 184126791 -69129792 - L1M4 LINE L1 -1624 4522 3974 25 65 0 0 chr2 184126914 184126960 -69129623 + AT_rich Low_complexity Low_complexity 1 46 0 5782 125 41 39 chr2 184126966 184128108 -69128475 - L1MA5 LINE L1 0 6300 5153 306 298 84 16 chr2 184128118 184128309 -69128274 - L1M4 LINE L1 -2410 3736 3533 2389 78 0 0 chr2 184128318 184128626 -69127957 + AluY SINE Alu 1 308 -3 4597 108 18 49 chr2 184129174 184129988 -69126595 - L1PB1 LINE L1 -194 5957 5119 7317 104 6 19 chr2 184129988 184131074 -69125509 - MER11C LTR ERVK 0 1071 1 4597 108 18 49 chr2 184131074 184131151 -69125432 - L1PB1 LINE L1 -1032 5119 5096 1297 68 11 0 chr2 184131151 184131327 -69125256 + L1PB1 LINE L1 5974 6151 0 399 56 42 28 chr2 184131329 184131401 -69125182 + L1M1 LINE L1 3148 3220 -4345 * 937 217 72 59 chr2 184131501 184131875 -69124708 - L1MEc LINE L1 -1723 4492 4114 785 130 13 130 chr2 184131867 184132097 -69124486 - L1MEc LINE L1 -3103 3112 2910 * 647 154 7 7 chr2 184132105 184132241 -69124342 - L1 LINE L1 -840 5306 5171 2218 236 63 17 chr2 184132258 184133104 -69123479 - L1MEc LINE L1 -3318 2897 2038 1371 110 68 18 chr2 184133104 184133323 -69123260 - MER30 DNA MER1_type 0 230 1 2218 236 63 17 chr2 184133323 184133527 -69123056 - L1MEc LINE L1 -4177 2038 1845 2798 257 75 31 chr2 184133531 184134672 -69121911 - L1MEc LINE L1 -4615 1781 591 412 213 0 0 chr2 184134730 184134805 -69121778 - Tigger5 DNA MER2_type -2248 75 1 993 269 88 12 chr2 184134805 184135136 -69121447 - L1MEc LINE L1 -5803 593 238 1625 183 32 16 chr2 184135136 184135447 -69121136 + MLT2B2 LTR ERVL 1 316 -199 539 214 0 0 chr2 184135573 184135662 -69120921 + MLT2B2 LTR ERVL 334 422 -93 235 164 18 18 chr2 184135663 184135718 -69120865 - L1MEc LINE L1 -6258 138 84 2345 84 0 16 chr2 184136375 184136683 -69119900 - AluY SINE Alu -8 303 1 180 0 0 0 chr2 184137729 184137749 -69118834 + (A)n Simple_repeat Simple_repeat 1 20 0 198 184 224 0 chr2 184138575 184138624 -69117959 - L2 LINE L2 -1 3271 3212 223 267 53 40 chr2 184138652 184138727 -69117856 + L2 LINE L2 3233 3308 -5 1045 204 81 34 chr2 184138740 184138858 -69117725 + L1ME2 LINE L1 2841 2952 -3194 2321 144 50 24 chr2 184138858 184139281 -69117302 - Tigger2a DNA MER2_type 0 434 1 1045 204 81 34 chr2 184139281 184139545 -69117038 + L1ME2 LINE L1 2952 3241 -2905 2430 231 94 37 chr2 184139567 184139720 -69116863 + L1ME2 LINE L1 4885 5028 -1136 2391 97 3 0 chr2 184139720 184140031 -69116552 + AluSp SINE Alu 1 312 -1 2430 231 94 37 chr2 184140031 184141077 -69115506 + L1ME2 LINE L1 5028 6155 -9 210 182 0 23 chr2 184142360 184142404 -69114179 + CT-rich Low_complexity Low_complexity 2 44 0 2112 259 39 20 chr2 184142815 184143456 -69113127 + L1MEc LINE L1 37 689 -5707 1264 132 0 21 chr2 184143457 184143647 -69112936 + AluSg/x SINE Alu 95 280 -32 189 0 0 0 chr2 184143647 184143668 -69112915 + (CAAT)n Simple_repeat Simple_repeat 4 24 0 949 169 129 28 chr2 184143676 184143924 -69112659 + L1MEc LINE L1 702 974 -5422 234 271 131 57 chr2 184144611 184144733 -69111850 - L2 LINE L2 -4 3268 3138 437 274 25 76 chr2 184145123 184145320 -69111263 + MIR SINE MIR 26 212 -50 268 318 207 0 chr2 184145456 184145736 -69110847 - L2 LINE L2 -684 2630 2293 3466 111 23 25 chr2 184145738 184146259 -69110324 + MER1A DNA MER1_type 4 523 -4 297 0 0 0 chr2 184147382 184147415 -69109168 + (TA)n Simple_repeat Simple_repeat 1 33 0 189 318 182 14 chr2 184149555 184149703 -69106880 + L2 LINE L2 2267 2439 -875 454 196 19 17 chr2 184150374 184150490 -69106093 - L1MC5 LINE L1 -2 7993 7820 2057 128 10 3 chr2 184150491 184150788 -69105795 - AluJo SINE Alu -2 310 12 829 101 14 0 chr2 184150793 184150932 -69105651 + (TTTC)n Simple_repeat Simple_repeat 1 141 0 275 399 58 0 chr2 184151588 184151726 -69104857 + MER91A DNA MER1_type 15 160 -36 667 251 0 85 chr2 184152519 184152742 -69103841 - L1 LINE L1 -1884 4262 4059 4012 25 6 2 chr2 184152742 184153223 -69103360 + L1PA2 LINE L1 5672 6154 -1 374 279 0 9 chr2 184153415 184153526 -69103057 - LTR16C LTR ERVL -48 443 334 312 304 43 9 chr2 184153641 184153756 -69102827 - MER5A DNA MER1_type 0 189 71 1887 97 11 7 chr2 184153895 184154164 -69102419 - AluSp SINE Alu -43 270 1 338 237 29 111 chr2 184154434 184154562 -69102021 - L1MB2 LINE L1 -27 6144 6038 2292 81 0 3 chr2 184154562 184154858 -69101725 + AluSq SINE Alu 1 295 -18 338 237 29 111 chr2 184154858 184154936 -69101647 - L1MB2 LINE L1 -133 6038 5955 1209 125 49 0 chr2 184155328 184155512 -69101071 - AluSq SINE Alu -120 193 1 249 262 10 99 chr2 184155512 184155714 -69100869 - L1 LINE L1 -3014 3132 2949 1129 242 13 26 chr2 184155716 184156928 -69099655 - BSR/Beta Satellite Satellite -1 1195 1 3812 70 4 2 chr2 184157035 184157552 -69099031 + L1P LINE L1 1418 1935 -4211 23 0 0 0 chr2 184157668 184157691 -69098892 + AT_rich Low_complexity Low_complexity 1 23 0 1662 210 57 8 chr2 184157914 184158285 -69098298 + L1PA16 LINE L1 5717 6105 -61 220 132 75 0 chr2 184158626 184158679 -69097904 + CT-rich Low_complexity Low_complexity 1 57 0 326 147 64 110 chr2 184158762 184158871 -69097712 - L1MC5 LINE L1 -920 7041 6938 3196 86 53 53 chr2 184158878 184159428 -69097155 + L1MA3 LINE L1 5655 6204 -101 645 219 159 55 chr2 184159690 184159952 -69096631 - L1MC5 LINE L1 -1015 7027 6649 925 279 57 10 chr2 184160051 184160349 -69096234 - L1MC5 LINE L1 -2074 5734 5423 3039 226 74 34 chr2 184160360 184162184 -69094399 - L1ME2 LINE L1 -9 6224 4313 3246 264 58 50 chr2 184162202 184162982 -69093601 - L1ME2 LINE L1 -3007 3208 2435 2246 116 0 3 chr2 184162982 184163293 -69093290 + AluSg SINE Alu 1 310 0 3246 264 58 50 chr2 184163293 184164342 -69092241 - L1ME2 LINE L1 -3780 2435 1395 225 196 0 0 chr2 184164342 184164388 -69092195 + (TG)n Simple_repeat Simple_repeat 2 47 0 3246 264 58 50 chr2 184164388 184165708 -69090875 - L1ME2 LINE L1 -4820 1395 36 315 195 0 0 chr2 184165713 184165790 -69090793 - L1MC5 LINE L1 -2370 5438 5362 27 29 0 0 chr2 184165945 184165979 -69090604 + AT_rich Low_complexity Low_complexity 1 34 0 348 319 0 6 chr2 184166122 184166279 -69090304 - L1MC5 LINE L1 -1194 4952 4797 356 297 179 7 chr2 184166940 184167085 -69089498 + MIR SINE MIR 21 190 -72 1419 90 0 0 chr2 184167184 184167362 -69089221 - AluY SINE Alu -4 307 130 23 0 0 0 chr2 184167802 184167825 -69088758 + AT_rich Low_complexity Low_complexity 1 23 0 779 151 20 0 chr2 184168403 184168555 -69088028 + MER53 DNA DNA 23 177 -12 36 62 0 0 chr2 184168571 184168635 -69087948 + AT_rich Low_complexity Low_complexity 1 64 0 1204 137 31 31 chr2 184168636 184168892 -69087691 - L1MA7 LINE L1 -3 6288 6033 233 135 0 0 chr2 184168892 184168929 -69087654 - MER53 DNA DNA -152 37 1 1902 142 0 0 chr2 184171191 184171465 -69085118 + AluJb SINE Alu 1 274 -38 534 78 29 0 chr2 184171465 184171567 -69085016 + (TCTA)n Simple_repeat Simple_repeat 4 108 0 313 287 2 47 chr2 184171836 184171999 -69084584 - MER5A DNA MER1_type 0 189 59 2050 164 0 0 chr2 184172528 184172838 -69083745 - AluSx SINE Alu -2 310 1 347 214 14 0 chr2 184173235 184173305 -69083278 + L2 LINE L2 3202 3272 0 33 0 0 0 chr2 184173893 184173926 -69082657 + AT_rich Low_complexity Low_complexity 1 33 0 2241 106 0 3 chr2 184173926 184174219 -69082364 - AluSx SINE Alu -20 292 1 961 247 180 28 chr2 184174299 184174759 -69081824 + L2 LINE L2 2773 3300 -13 263 291 168 5 chr2 184174967 184175170 -69081413 + L1ME4a LINE L1 5692 5927 -194 255 349 12 0 chr2 184175211 184175297 -69081286 - MIR SINE MIR -130 132 46 926 251 48 0 chr2 184178184 184178411 -69078172 + MIR SINE MIR 15 252 -10 217 291 58 12 chr2 184179285 184179371 -69077212 + L2 LINE L2 3176 3265 -7 2634 46 0 0 chr2 184179479 184179783 -69076800 + AluY SINE Alu 1 304 -7 1238 238 122 99 chr2 184180405 184181943 -69074640 - HAL1 LINE L1 -120 2387 816 958 179 0 0 chr2 184182226 184182388 -69074195 - AluJb SINE Alu -4 308 147 22 0 0 0 chr2 184183226 184183248 -69073335 + AT_rich Low_complexity Low_complexity 1 22 0 197 294 88 39 chr2 184184310 184184412 -69072171 - MIR SINE MIR -62 146 40 25 0 0 0 chr2 184186569 184186594 -69069989 + AT_rich Low_complexity Low_complexity 1 25 0 2352 255 81 108 chr2 184186680 184189041 -69067542 - HAL1 LINE L1 -108 2399 104 285 125 0 0 chr2 184189047 184189095 -69067488 - Alu SINE Alu -8 294 247 21 0 0 0 chr2 184189100 184189121 -69067462 + AT_rich Low_complexity Low_complexity 1 21 0 401 282 115 0 chr2 184189436 184189592 -69066991 - MER96 DNA MER1_type -1 174 1 2601 127 31 2 chr2 184189650 184190066 -69066517 - MSTA LTR MaLR 0 428 1 1945 156 0 0 chr2 184190244 184190539 -69066044 + AluSx SINE Alu 1 295 -17 205 280 20 20 chr2 184191142 184191192 -69065391 + L2 LINE L2 3127 3176 -96 303 318 35 47 chr2 184192182 184192352 -69064231 - MER5A DNA MER1_type -8 181 14 2102 92 25 41 chr2 184192461 184192778 -69063805 - AluSx SINE Alu 0 312 1 3561 233 44 54 chr2 184193612 184195084 -69061499 - L1M4 LINE L1 -2165 3981 2525 301 210 16 0 chr2 184195084 184195146 -69061437 + MER5A DNA MER1_type 127 189 0 22 56 0 0 chr2 184195787 184195823 -69060760 + AT_rich Low_complexity Low_complexity 1 36 0 1824 197 25 25 chr2 184196150 184196546 -69060037 - MSTD LTR MaLR 0 396 1 265 310 110 14 chr2 184196583 184196728 -69059855 + MER5B DNA MER1_type 4 162 -16 715 242 103 14 chr2 184197445 184197668 -69058915 - MIR SINE MIR -18 244 2 2145 160 26 5 chr2 184198062 184198444 -69058139 + MLT1B LTR MaLR 1 390 0 1065 121 0 18 chr2 184198521 184198687 -69057896 - L1PA10 LINE L1 0 6168 6006 334 277 73 66 chr2 184201412 184201549 -69055034 + MIR3 SINE MIR 1 138 -70 298 318 62 0 chr2 184202885 184203014 -69053569 - MIR SINE MIR -4 258 122 5503 47 1 3 chr2 184203141 184203819 -69052764 - L1PA7 LINE L1 0 6154 5478 1586 30 13 0 chr2 184203819 184204093 -69052490 + L1PA7 LINE L1 5192 5468 -704 371 214 0 0 chr2 184204711 184204781 -69051802 - MER115 DNA AcHobo -478 215 146 209 245 19 0 chr2 184207113 184207166 -69049417 - MIR SINE MIR -10 252 199 279 218 36 55 chr2 184207607 184207717 -69048866 + MLT1K LTR MaLR 471 578 -10 490 258 55 78 chr2 184207855 184208049 -69048534 - MIR SINE MIR -58 150 13 1737 78 0 0 chr2 184208494 184208712 -69047871 - AluSg/x SINE Alu -14 298 81 180 111 0 0 chr2 184209424 184209451 -69047132 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 356 213 12 0 chr2 184211329 184211409 -69045174 - MER94 DNA DNA -51 83 3 1187 236 41 81 chr2 184211425 184211606 -69044977 - MLT1D LTR MaLR -17 488 301 798 120 8 0 chr2 184211606 184211723 -69044860 - L1MC1 LINE L1 0 6333 6216 1187 236 41 81 chr2 184211723 184212049 -69044534 - MLT1D LTR MaLR -204 301 1 352 280 106 40 chr2 184212079 184212400 -69044183 - MLT1L LTR MaLR -75 540 199 873 251 27 104 chr2 184213412 184213786 -69042797 - L2 LINE L2 0 3313 2969 583 278 128 78 chr2 184213783 184214355 -69042228 + L2 LINE L2 2703 3303 -10 * 2091 123 74 6 chr2 184214356 184214707 -69041876 + THE1C LTR MaLR 1 375 0 185 0 40 0 chr2 184214793 184214818 -69041765 + (CCA)n Simple_repeat Simple_repeat 3 28 0 809 264 187 20 chr2 184215710 184216082 -69040501 + L1ME4a LINE L1 5423 5732 -389 2902 10 0 0 chr2 184216082 184216396 -69040187 + AluYb8 SINE Alu 1 314 -4 809 264 187 20 chr2 184216396 184216610 -69039973 + L1ME4a LINE L1 5732 6107 -14 594 345 26 0 chr2 184216627 184216848 -69039735 + MIR SINE MIR 34 262 0 22 0 0 0 chr2 184217094 184217116 -69039467 + AT_rich Low_complexity Low_complexity 1 22 0 180 111 0 0 chr2 184217183 184217210 -69039373 + (TTC)n Simple_repeat Simple_repeat 2 28 0 292 329 90 6 chr2 184217374 184217541 -69039042 - MLT1J LTR MaLR -260 251 71 2557 234 95 64 chr2 184217770 184219025 -69037558 - HAL1 LINE L1 -145 2362 1069 449 219 54 73 chr2 184219065 184219220 -69037363 - HAL1 LINE L1 -1542 965 813 2052 129 3 3 chr2 184219220 184219514 -69037069 + AluSx SINE Alu 3 296 -16 449 219 54 73 chr2 184219514 184219563 -69037020 - HAL1 LINE L1 -1694 813 765 360 215 0 0 chr2 184219608 184219687 -69036896 + MLT1I LTR MaLR 314 392 -17 1038 278 46 11 chr2 184219757 184220128 -69036455 - L1ME1 LINE L1 -5 6161 5778 309 236 106 12 chr2 184220128 184220289 -69036294 - Charlie7 DNA MER1_type -7 2605 2430 391 275 102 20 chr2 184220611 184220916 -69035667 - L1M4 LINE L1 -2682 3464 3135 23 0 0 0 chr2 184221227 184221250 -69035333 + AT_rich Low_complexity Low_complexity 1 23 0 951 217 143 76 chr2 184222278 184222770 -69033813 + MLT1G LTR MaLR 1 530 -12 376 271 115 42 chr2 184222806 184223094 -69033489 - L1ME4a LINE L1 -244 5877 5569 584 288 113 22 chr2 184223167 184223389 -69033194 + MIR SINE MIR 21 262 0 1014 174 50 82 chr2 184225887 184226169 -69030414 - MLT1C LTR MaLR -8 459 187 1472 206 0 7 chr2 184226221 184226497 -69030086 - AluJb SINE Alu -25 287 14 552 242 73 11 chr2 184226499 184226677 -69029906 - MLT1C LTR MaLR -278 189 1 380 321 77 23 chr2 184227595 184227816 -69028767 - MIR SINE MIR -10 252 20 720 196 20 0 chr2 184227950 184228098 -69028485 + MER20 DNA MER1_type 1 151 -68 382 127 99 0 chr2 184228200 184228271 -69028312 + MER20 DNA MER1_type 141 218 -1 2421 147 42 2 chr2 184228365 184228773 -69027810 + MSTB LTR MaLR 1 424 -2 2209 101 9 29 chr2 184228841 184229157 -69027426 + AluSq SINE Alu 1 310 -3 257 0 30 0 chr2 184230116 184230149 -69026434 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 498 323 36 36 chr2 184230497 184230720 -69025863 + MIR SINE MIR 20 242 -20 273 57 0 0 chr2 184231028 184231063 -69025520 + (TG)n Simple_repeat Simple_repeat 2 36 0 185 205 0 0 chr2 184231459 184231498 -69025085 - MIR SINE MIR -60 148 110 566 196 14 42 chr2 184231881 184232024 -69024559 + MER69 DNA AcHobo 9 147 -2379 238 192 0 19 chr2 184232062 184232114 -69024469 + MER69 DNA AcHobo 2476 2526 0 678 260 55 31 chr2 184232195 184232449 -69024134 + MLT1J LTR MaLR 22 281 -230 21 57 0 0 chr2 184232930 184232965 -69023618 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr2 184233117 184233139 -69023444 + AT_rich Low_complexity Low_complexity 1 22 0 264 151 0 110 chr2 184233337 184233410 -69023173 + MLT1K LTR MaLR 181 245 -343 22 0 0 0 chr2 184234239 184234261 -69022322 + AT_rich Low_complexity Low_complexity 1 22 0 333 188 0 0 chr2 184234743 184234823 -69021760 + (TTCA)n Simple_repeat Simple_repeat 3 82 0 183 273 0 0 chr2 184234825 184234869 -69021714 - L2 LINE L2 -1 3312 3269 1101 265 81 35 chr2 184236127 184236596 -69019987 - MLT1H LTR MaLR -5 544 15 202 288 55 0 chr2 184236774 184236847 -69019736 + L2 LINE L2 2685 2761 -553 1734 121 73 0 chr2 184236866 184237139 -69019444 - AluSq SINE Alu -20 293 1 263 303 121 0 chr2 184237436 184237535 -69019048 + L2 LINE L2 3186 3296 -17 2223 104 10 0 chr2 184237897 184238186 -69018397 + AluSx SINE Alu 1 292 -20 422 302 52 17 chr2 184238994 184239166 -69017417 - MIR SINE MIR -26 236 59 217 309 0 0 chr2 184239263 184239318 -69017265 - MIR SINE MIR -7 255 201 562 289 90 33 chr2 184239401 184239612 -69016971 + MIR SINE MIR 7 229 -33 22 0 0 0 chr2 184240030 184240052 -69016531 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 184240787 184240808 -69015775 + AT_rich Low_complexity Low_complexity 1 21 0 693 216 96 0 chr2 184241806 184241973 -69014610 + MER5A DNA MER1_type 4 186 -3 609 243 28 17 chr2 184242607 184242784 -69013799 - MIR SINE MIR -70 192 14 449 323 19 25 chr2 184242888 184243049 -69013534 - MIR SINE MIR -51 211 52 326 178 0 55 chr2 184243691 184243764 -69012819 - L2 LINE L2 0 3313 3245 2447 185 53 8 chr2 184243779 184244310 -69012273 - L1MB8 LINE L1 -5 6173 5619 1137 152 0 0 chr2 184244396 184244580 -69012003 - L1MB8 LINE L1 -572 5606 5423 391 232 182 71 chr2 184244582 184244780 -69011803 - L2 LINE L2 -557 2757 2538 338 295 74 20 chr2 184245011 184245160 -69011423 + MIR SINE MIR 25 181 -81 349 22 0 0 chr2 184245166 184245212 -69011371 + MADE1 DNA Mariner 35 80 0 394 311 8 8 chr2 184246298 184246420 -69010163 + MLT1J1 LTR MaLR 17 138 -308 350 242 227 5 chr2 184248222 184248420 -69008163 - L1ME4a LINE L1 0 6121 5880 483 294 56 50 chr2 184248609 184248769 -69007814 + L2 LINE L2 3112 3272 0 707 181 79 0 chr2 184248945 184249072 -69007511 - MER63A DNA MER1_type -2 208 72 216 135 0 0 chr2 184249088 184249125 -69007458 + (T)n Simple_repeat Simple_repeat 1 37 0 363 244 12 0 chr2 184249162 184249244 -69007339 + MIR SINE MIR 87 169 -93 316 273 45 11 chr2 184249254 184249342 -69007241 + MER91C DNA MER1_type 31 121 -19 305 128 93 93 chr2 184249340 184249426 -69007157 + MIR SINE MIR 165 250 -12 * 292 286 164 4 chr2 184249451 184249713 -69006870 - L1ME4a LINE L1 -548 5614 5311 190 281 35 18 chr2 184251814 184251871 -69004712 + MIR SINE MIR 89 146 -62 257 333 81 0 chr2 184252126 184252213 -69004370 + L2 LINE L2 3149 3242 -30 554 208 48 18 chr2 184252215 184252389 -69004194 + MER69 DNA AcHobo 1 2524 -2 395 277 30 10 chr2 184252764 184252865 -69003718 - MIR SINE MIR -110 152 50 2186 118 0 6 chr2 184253248 184253561 -69003022 + AluSx SINE Alu 1 311 -1 274 246 284 45 chr2 184253953 184254087 -69002496 - MIR SINE MIR -78 184 19 301 261 135 9 chr2 184254289 184254400 -69002183 + MER63 DNA MER1_type 1 751 -311 1773 166 10 16 chr2 184254682 184254990 -69001593 - AluSx SINE Alu -5 307 2 361 200 35 12 chr2 184255999 184256084 -69000499 + MIR SINE MIR 84 170 -92 189 0 0 0 chr2 184257110 184257131 -68999452 + (TTCC)n Simple_repeat Simple_repeat 4 24 0 3353 230 118 31 chr2 184257650 184258773 -68997810 + MER69B DNA AcHobo 2 1222 -4 180 266 31 47 chr2 184258843 184258907 -68997676 - MIR SINE MIR -57 151 89 965 239 108 75 chr2 184259539 184260307 -68996276 - L2 LINE L2 0 3313 2529 207 356 198 14 chr2 184260388 184260610 -68995973 + L2 LINE L2 2916 3178 -94 1739 159 32 0 chr2 184260611 184260925 -68995658 - THE1B LTR MaLR -35 329 6 227 171 0 24 chr2 184260926 184260967 -68995616 + L2 LINE L2 3262 3301 -12 1786 188 3 7 chr2 184261008 184261306 -68995277 - AluJo SINE Alu -15 297 1 1984 173 20 6 chr2 184261656 184262014 -68994569 + MLT1A1 LTR MaLR 1 363 -2 2053 124 14 0 chr2 184262548 184262831 -68993752 - AluSx SINE Alu -20 292 6 289 319 50 12 chr2 184262847 184263007 -68993576 + LTR16C LTR ERVL 262 427 -64 205 154 0 77 chr2 184263785 184263837 -68992746 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 542 128 37 18 chr2 184263989 184264098 -68992485 + L1PA11 LINE L1 6064 6174 0 1793 163 6 44 chr2 184265766 184266085 -68990498 - AluJb SINE Alu -3 309 3 825 305 116 24 chr2 184266244 184266624 -68989959 - L2 LINE L2 -655 2659 2245 284 248 51 80 chr2 184266650 184266787 -68989796 - MIR SINE MIR -46 216 84 195 42 0 0 chr2 184267140 184267164 -68989419 + (TG)n Simple_repeat Simple_repeat 1 24 0 1434 143 0 18 chr2 184270715 184270939 -68985644 - AluJb SINE Alu -9 303 84 200 262 0 0 chr2 184271335 184271377 -68985206 + GA-rich Low_complexity Low_complexity 5 46 0 7331 57 9 1 chr2 184271838 184273459 -68983124 - L1PA7 LINE L1 -11 6143 4514 238 260 146 31 chr2 184274810 184274906 -68981677 - MIR3 SINE MIR -17 191 85 339 346 73 29 chr2 184275801 184276116 -68980467 + L1M2 LINE L1 1035 1363 -5486 215 358 8 33 chr2 184277146 184277266 -68979317 + MIR SINE MIR 59 175 -87 312 27 0 0 chr2 184277736 184277773 -68978810 + (TG)n Simple_repeat Simple_repeat 2 38 0 611 321 42 6 chr2 184278120 184278288 -68978295 - MER91A DNA MER1_type -22 174 1 387 0 0 0 chr2 184278413 184278456 -68978127 + (TG)n Simple_repeat Simple_repeat 2 44 0 208 320 31 31 chr2 184279906 184280003 -68976580 + L3 LINE CR1 1479 1575 -2 970 184 0 0 chr2 184280834 184280992 -68975591 - FRAM SINE Alu -15 161 4 764 195 26 89 chr2 184281931 184282121 -68974462 - MER5B DNA MER1_type 0 178 1 2284 91 0 7 chr2 184283397 184283694 -68972889 - AluSc SINE Alu -14 295 1 186 315 0 0 chr2 184283754 184283808 -68972775 + MIR SINE MIR 75 128 -134 1861 148 3 3 chr2 184283923 184284206 -68972377 + AluJb SINE Alu 14 296 -16 391 307 99 25 chr2 184285851 184286053 -68970530 + MIR SINE MIR 32 248 -14 224 149 21 0 chr2 184288521 184288568 -68968015 + (CATATA)n Simple_repeat Simple_repeat 5 52 0 215 305 49 0 chr2 184288573 184288655 -68967928 - MIR SINE MIR -59 203 118 * 270 236 0 0 chr2 184288653 184288708 -68967875 + L2 LINE L2 3258 3312 -1 1758 153 0 62 chr2 184289904 184290211 -68966372 - AluJo SINE Alu -24 288 1 21 0 0 0 chr2 184290211 184290232 -68966351 + AT_rich Low_complexity Low_complexity 1 21 0 212 268 42 0 chr2 184290467 184290538 -68966045 - L2 LINE L2 -214 3058 2985 2645 132 62 5 chr2 184290653 184291056 -68965527 + MSTB LTR MaLR 1 426 0 1400 192 49 0 chr2 184291151 184291459 -68965124 - MER33 DNA MER1_type -1 323 1 207 250 0 0 chr2 184291999 184292043 -68964540 + MIR SINE MIR 110 153 -109 444 145 26 0 chr2 184293128 184293204 -68963379 + MLT1J LTR MaLR 103 180 -331 625 271 42 21 chr2 184293255 184293447 -68963136 + MLT1J2 LTR MaLR 248 443 -7 212 149 21 0 chr2 184293594 184293641 -68962942 + GA-rich Low_complexity Low_complexity 4 51 0 35 54 0 0 chr2 184295874 184295930 -68960653 + AT_rich Low_complexity Low_complexity 1 56 0 513 136 36 36 chr2 184295930 184296040 -68960543 + L1MB7 LINE L1 6074 6183 -1 247 189 179 63 chr2 184296676 184296771 -68959812 - MER5C DNA MER1_type -1 323 218 4923 136 67 23 chr2 184296772 184297330 -68959253 + L1MA6 LINE L1 5346 5961 -339 2581 50 0 0 chr2 184297330 184297632 -68958951 + AluY SINE Alu 1 302 -9 4923 136 67 23 chr2 184297632 184297986 -68958597 + L1MA6 LINE L1 5961 6298 -2 338 183 258 0 chr2 184298749 184298842 -68957741 - MER5C DNA MER1_type -200 124 8 343 357 56 0 chr2 184298953 184299079 -68957504 + L3 LINE CR1 569 701 -876 399 286 44 84 chr2 184299086 184299313 -68957270 - MIR SINE MIR -11 251 34 349 323 37 26 chr2 184299337 184299526 -68957057 + L3 LINE CR1 702 892 -685 1984 137 0 3 chr2 184299577 184299862 -68956721 - AluSx SINE Alu -28 284 1 1859 167 101 0 chr2 184299911 184300217 -68956366 + MER1B DNA MER1_type 1 337 0 500 147 0 11 chr2 184300296 184300391 -68956192 + (TTCTCC)n Simple_repeat Simple_repeat 3 96 0 2105 136 36 57 chr2 184300393 184300568 -68956015 - L1MA10 LINE L1 -10 6324 6147 203 79 26 0 chr2 184300568 184300606 -68955977 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2105 136 36 57 chr2 184300606 184300819 -68955764 - L1MA10 LINE L1 -187 6147 5944 687 191 111 0 chr2 184300819 184301008 -68955575 + L1 LINE L1 3006 3215 -2931 571 122 226 26 chr2 184301008 184301123 -68955460 + MER1B DNA MER1_type 159 296 -43 870 155 75 0 chr2 184301144 184301318 -68955265 + L1 LINE L1 3223 3409 -2737 241 279 135 56 chr2 184301447 184301662 -68954921 + LTR16C LTR ERVL 260 491 0 226 320 77 0 chr2 184301662 184301740 -68954843 + L3 LINE CR1 878 961 -616 266 263 0 25 chr2 184301740 184301820 -68954763 + GA-rich Low_complexity Low_complexity 2 79 0 242 313 141 39 chr2 184302303 184302431 -68954152 + MIR3 SINE MIR 13 153 -55 479 175 84 70 chr2 184302596 184302675 -68953908 + MER5A DNA MER1_type 42 125 -64 2109 152 0 0 chr2 184302675 184302985 -68953598 - AluSx SINE Alu -2 310 1 479 175 84 70 chr2 184302985 184303048 -68953535 + MER5A DNA MER1_type 125 186 -3 30 0 0 0 chr2 184303346 184303376 -68953207 + AT_rich Low_complexity Low_complexity 1 30 0 301 335 43 43 chr2 184306535 184306699 -68949884 + MIR SINE MIR 99 262 0 2214 147 163 0 chr2 184307250 184307618 -68948965 - MSTA LTR MaLR 0 428 1 412 213 137 82 chr2 184311358 184311541 -68945042 - MLT1J LTR MaLR -18 493 301 414 275 18 28 chr2 184311982 184312091 -68944492 + MIR SINE MIR 23 130 -78 934 270 150 15 chr2 184312146 184312677 -68943906 + L2 LINE L2 2713 3313 0 383 277 163 35 chr2 184313801 184314003 -68942580 - MIR SINE MIR -1 261 34 702 241 0 0 chr2 184314003 184314144 -68942439 - MER63A DNA MER1_type -13 197 57 190 288 113 12 chr2 184314542 184314622 -68941961 - MIR3 SINE MIR -7 201 114 215 372 0 13 chr2 184315990 184316068 -68940515 - L2 LINE L2 -557 2757 2681 372 237 30 76 chr2 184316084 184316282 -68940301 + MER113 DNA MER1_type? 2 190 -331 1026 138 0 19 chr2 184316293 184316453 -68940130 + FRAM SINE Alu 12 168 -8 294 50 0 0 chr2 184319391 184319431 -68937152 + (TG)n Simple_repeat Simple_repeat 2 41 0 604 214 23 38 chr2 184319660 184319791 -68936792 + MIR SINE MIR 44 172 -90 546 199 70 29 chr2 184319813 184319984 -68936599 - MIR SINE MIR -43 219 42 764 263 30 42 chr2 184320309 184320571 -68936012 + MIR SINE MIR 3 261 -1 300 111 0 0 chr2 184321658 184321703 -68934880 + (TA)n Simple_repeat Simple_repeat 1 45 0 2898 150 29 29 chr2 184321908 184322271 -68934312 + L1MA9 LINE L1 5800 6165 -147 204 67 0 0 chr2 184322271 184322301 -68934282 + (CA)n Simple_repeat Simple_repeat 1 30 0 2898 150 29 29 chr2 184322301 184322450 -68934133 + L1MA9 LINE L1 6164 6312 0 664 274 55 20 chr2 184322727 184322928 -68933655 - MER63A DNA MER1_type 0 210 3 184 278 196 10 chr2 184325695 184325792 -68930791 - MIR SINE MIR -44 218 104 215 196 0 89 chr2 184326477 184326533 -68930050 + MIR3 SINE MIR 140 190 -18 200 273 0 18 chr2 184327179 184327234 -68929349 - L2 LINE L2 -47 3266 3213 685 220 21 0 chr2 184327719 184327860 -68928723 + Charlie4 DNA MER1_type 1818 1961 0 547 327 50 20 chr2 184328176 184328522 -68928061 + MLT1L LTR MaLR 114 535 -80 4051 45 2 0 chr2 184328870 184329333 -68927250 + L1PA5 LINE L1 5689 6152 -2 192 239 147 37 chr2 184329513 184329622 -68926961 + L2 LINE L2 3143 3263 -9 250 285 159 34 chr2 184330572 184330867 -68925716 - L1MD1 LINE L1 -285 5957 5626 354 221 52 0 chr2 184330872 184330949 -68925634 + MER94 DNA DNA 1 81 -53 252 357 48 12 chr2 184331015 184331183 -68925400 - L1MD1 LINE L1 -2179 5606 5433 251 283 3 0 chr2 184331236 184331333 -68925250 - L1P LINE L1 -807 5339 5241 31 0 0 0 chr2 184331452 184331483 -68925100 + AT_rich Low_complexity Low_complexity 1 31 0 276 143 36 18 chr2 184331664 184331720 -68924863 - MER5A DNA MER1_type -100 89 33 252 313 104 0 chr2 184331780 184331876 -68924707 - MIR3 SINE MIR -12 196 91 2067 120 3 3 chr2 184334661 184334952 -68921631 + AluSx SINE Alu 5 295 -17 26 64 0 0 chr2 184334997 184335044 -68921539 + AT_rich Low_complexity Low_complexity 1 47 0 25 31 0 0 chr2 184335446 184335478 -68921105 + AT_rich Low_complexity Low_complexity 1 32 0 409 137 14 0 chr2 184336087 184336160 -68920423 - MER116 DNA Mariner 0 80 7 389 261 52 37 chr2 184336233 184336367 -68920216 + MIR SINE MIR 58 193 -69 206 237 204 0 chr2 184337073 184337166 -68919417 - MIR SINE MIR -28 234 123 400 335 50 6 chr2 184339332 184339514 -68917069 - MIR SINE MIR -50 212 23 341 136 15 0 chr2 184341343 184341409 -68915174 + (TG)n Simple_repeat Simple_repeat 1 67 0 185 339 0 0 chr2 184342113 184342169 -68914414 - MIR SINE MIR -56 152 97 212 0 36 0 chr2 184342171 184342199 -68914384 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 254 299 39 50 chr2 184343717 184343971 -68912612 - L2 LINE L2 -282 2990 2743 2152 108 3 10 chr2 184344018 184344324 -68912259 + AluSg SINE Alu 1 304 -6 349 231 135 0 chr2 184346777 184346881 -68909702 + MER103 DNA DNA 4 121 -45 387 0 0 0 chr2 184347522 184347565 -68909018 + (CA)n Simple_repeat Simple_repeat 1 43 0 291 28 0 0 chr2 184347564 184347600 -68908983 + (TC)n Simple_repeat Simple_repeat 2 37 0 * 21 0 0 0 chr2 184348251 184348272 -68908311 + AT_rich Low_complexity Low_complexity 1 21 0 186 229 73 92 chr2 184348870 184348954 -68907629 + L2 LINE L2 2998 3081 -232 189 0 0 0 chr2 184348954 184348975 -68907608 + (CA)n Simple_repeat Simple_repeat 1 21 0 186 229 73 92 chr2 184348975 184348999 -68907584 + L2 LINE L2 3081 3104 -209 1322 180 78 58 chr2 184349037 184349332 -68907251 - AluJo SINE Alu -5 307 7 618 191 25 68 chr2 184349353 184349515 -68907068 + L2 LINE L2 3159 3313 0 290 316 18 44 chr2 184349547 184349661 -68906922 + Tigger8 DNA MER2_type 554 664 -2 1607 123 20 16 chr2 184349765 184350009 -68906574 - MER1B DNA MER1_type 0 339 135 208 227 18 18 chr2 184350396 184350459 -68906124 - MIR SINE MIR -77 131 68 263 331 123 12 chr2 184350795 184350958 -68905625 - MIR3 SINE MIR -27 181 1 2239 99 62 22 chr2 184351398 184351722 -68904861 + MER1B DNA MER1_type 1 337 0 1519 209 36 0 chr2 184351951 184352258 -68904325 + L1MD2 LINE L1 6027 6344 -15 21 36 0 0 chr2 184352335 184352363 -68904220 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 184352542 184352566 -68904017 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr2 184354065 184354088 -68902495 + AT_rich Low_complexity Low_complexity 1 23 0 716 276 16 16 chr2 184354100 184354292 -68902291 - MIR SINE MIR -5 257 66 3019 153 35 40 chr2 184355278 184355796 -68900787 - MLT2B2 LTR ERVL 0 515 1 1419 206 59 45 chr2 184356176 184356550 -68900033 + MLT1B LTR MaLR 1 379 -11 406 334 65 71 chr2 184356601 184356939 -68899644 - L2 LINE L2 -85 3187 2852 * 618 316 33 35 chr2 184356926 184357293 -68899290 - L2 LINE L2 -579 2735 2370 962 333 140 20 chr2 184358000 184358758 -68897825 - L2 LINE L2 -680 2634 1786 1276 183 40 77 chr2 184359546 184359895 -68896688 + MER46C DNA MER2_type 3 338 0 295 292 54 30 chr2 184360434 184360582 -68896001 - MIR SINE MIR -61 147 12 183 167 0 28 chr2 184361225 184361261 -68895322 - L3b LINE CR1 -18 1565 1531 273 57 0 0 chr2 184361751 184361786 -68894797 + (CA)n Simple_repeat Simple_repeat 2 36 0 643 313 172 41 chr2 184364079 184364590 -68891993 + MLT1K LTR MaLR 2 579 -9 1779 162 50 23 chr2 184365348 184365650 -68890933 - AluJo SINE Alu 0 312 3 189 0 0 0 chr2 184365685 184365706 -68890877 + (A)n Simple_repeat Simple_repeat 1 21 0 2087 109 0 7 chr2 184365748 184366063 -68890520 - AluY SINE Alu 0 313 1 201 74 0 0 chr2 184366131 184366158 -68890425 + (A)n Simple_repeat Simple_repeat 1 27 0 504 200 0 0 chr2 184366321 184366426 -68890157 + CT-rich Low_complexity Low_complexity 2 106 0 375 312 43 0 chr2 184366505 184366643 -68889940 - MIR3 SINE MIR -25 183 40 486 288 74 23 chr2 184367984 184368200 -68888383 - MLT1J2 LTR MaLR -188 258 33 2229 112 0 10 chr2 184368660 184368972 -68887611 - AluSc SINE Alu 0 309 1 414 0 0 0 chr2 184369062 184369108 -68887475 + (CA)n Simple_repeat Simple_repeat 1 46 0 * 441 0 0 0 chr2 184369107 184369156 -68887427 + (GA)n Simple_repeat Simple_repeat 2 50 0 1662 173 3 55 chr2 184369853 184370165 -68886418 - AluJb SINE Alu -16 296 1 280 235 39 47 chr2 184371481 184371609 -68884974 + MIR SINE MIR 23 148 -67 2152 103 7 3 chr2 184372740 184373030 -68883553 + AluSq SINE Alu 1 291 -22 240 259 0 17 chr2 184377432 184377490 -68879093 - L3 LINE CR1 -7 1570 1514 183 191 44 15 chr2 184377986 184378054 -68878529 + GA-rich Low_complexity Low_complexity 6 75 0 1129 156 50 0 chr2 184378702 184378882 -68877701 + MER5A DNA MER1_type 1 189 0 5002 126 38 49 chr2 184379303 184380166 -68876417 + Tigger1 DNA MER2_type 2 855 -1563 240 35 0 0 chr2 184380787 184380816 -68875767 + (T)n Simple_repeat Simple_repeat 1 29 0 32 43 0 0 chr2 184381506 184381552 -68875031 + GC_rich Low_complexity Low_complexity 1 46 0 252 0 0 0 chr2 184381586 184381614 -68874969 + (T)n Simple_repeat Simple_repeat 1 28 0 1456 146 0 30 chr2 184382598 184382831 -68873752 - AluJb SINE Alu -86 226 1 469 202 42 17 chr2 184383140 184383259 -68873324 + MER94 DNA DNA 10 131 -3 276 231 46 0 chr2 184383787 184383852 -68872731 - MIR SINE MIR -106 156 89 331 317 251 0 chr2 184385006 184385173 -68871410 - MIR SINE MIR -13 249 41 234 250 0 0 chr2 184385418 184385466 -68871117 + (CA)n Simple_repeat Simple_repeat 1 48 0 2148 123 10 0 chr2 184387346 184387646 -68868937 + AluSx SINE Alu 1 303 -9 11928 77 10 16 chr2 184387920 184389560 -68867023 - L1PA7 LINE L1 -1233 4913 3284 7565 55 5 1 chr2 184389560 184390790 -68865793 + L1PA7 LINE L1 4918 6151 -3 870 281 77 42 chr2 184391763 184392165 -68864418 + L2 LINE L2 2831 3246 -67 189 0 0 0 chr2 184392198 184392219 -68864364 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 4005 139 42 16 chr2 184392304 184392979 -68863604 + L1MC1 LINE L1 5641 6332 -1 195 42 0 0 chr2 184393053 184393077 -68863506 + (A)n Simple_repeat Simple_repeat 1 24 0 485 156 10 0 chr2 184394329 184394425 -68862158 + CT-rich Low_complexity Low_complexity 4 100 0 1291 155 0 44 chr2 184395114 184395340 -68861243 + AluJo SINE Alu 85 300 -12 365 347 54 6 chr2 184395608 184395775 -68860808 - MIR SINE MIR -42 220 46 2860 10 0 0 chr2 184398287 184398597 -68857986 - AluYa5 SINE Alu -1 310 1 26 30 0 0 chr2 184401544 184401577 -68855006 + AT_rich Low_complexity Low_complexity 1 33 0 207 0 0 0 chr2 184403056 184403079 -68853504 + (A)n Simple_repeat Simple_repeat 1 23 0 195 42 0 0 chr2 184403869 184403893 -68852690 + (A)n Simple_repeat Simple_repeat 1 24 0 773 265 32 9 chr2 184405723 184405942 -68850641 + MIR SINE MIR 2 225 -37 403 118 73 0 chr2 184405970 184406038 -68850545 + L2 LINE L2 3237 3309 -4 598 246 51 29 chr2 184406386 184406561 -68850022 - MIR SINE MIR -37 225 47 1951 5 18 9 chr2 184407295 184407512 -68849071 + AluYa5 SINE Alu 83 301 -10 252 280 80 20 chr2 184409235 184409335 -68847248 + L2 LINE L2 3205 3310 -3 252 211 0 0 chr2 184409635 184409687 -68846896 + L1MA10 LINE L1 6280 6331 -3 428 211 117 7 chr2 184409718 184409857 -68846726 - MIR SINE MIR -67 141 16 223 318 0 24 chr2 184409954 184410039 -68846544 + CT-rich Low_complexity Low_complexity 5 87 0 628 235 84 33 chr2 184410459 184410672 -68845911 + MIR SINE MIR 20 243 -19 212 294 157 29 chr2 184412216 184412318 -68844265 - L2 LINE L2 -4 3268 3154 23 86 0 0 chr2 184415000 184415058 -68841525 + AT_rich Low_complexity Low_complexity 1 58 0 367 291 36 0 chr2 184420322 184420432 -68836151 - MIR SINE MIR -114 148 35 1122 78 0 0 chr2 184421284 184421438 -68835145 + (TTCC)n Simple_repeat Simple_repeat 2 155 0 1671 176 0 24 chr2 184421515 184421805 -68834778 + AluJo SINE Alu 1 283 -29 252 213 0 0 chr2 184421805 184421866 -68834717 + GA-rich Low_complexity Low_complexity 1 61 0 239 175 12 38 chr2 184421938 184422018 -68834565 + GA-rich Low_complexity Low_complexity 4 81 0 236 337 43 43 chr2 184422479 184422666 -68833917 - L2 LINE L2 -8 3305 3119 189 94 0 0 chr2 184422851 184422883 -68833700 + (TC)n Simple_repeat Simple_repeat 2 33 0 279 87 22 0 chr2 184422917 184422963 -68833620 + MADE1 DNA Mariner 1 47 -33 21 57 0 0 chr2 184423274 184423309 -68833274 + AT_rich Low_complexity Low_complexity 1 35 0 350 203 72 69 chr2 184423473 184423647 -68832936 + HAL1b LINE L1 814 2380 -127 426 280 85 47 chr2 184423921 184424239 -68832344 + L3b LINE CR1 1108 1437 -146 330 146 0 0 chr2 184425355 184425403 -68831180 + Tigger1 DNA MER2_type 1 48 -2370 * 617 183 36 15 chr2 184425398 184425535 -68831048 + Tigger1 DNA MER2_type 177 316 -2102 1107 88 5 98 chr2 184425537 184425752 -68830831 + L1MA4A LINE L1 6109 6303 0 361 319 78 33 chr2 184425760 184426198 -68830385 - MLT1L LTR MaLR -97 491 15 3291 103 17 2 chr2 184426377 184426845 -68829738 + Tigger1 DNA MER2_type 301 775 -1643 2360 127 55 30 chr2 184426858 184427260 -68829323 + Tigger1 DNA MER2_type 2007 2418 0 467 308 58 23 chr2 184427592 184427764 -68828819 - MIR3 SINE MIR -11 197 20 254 350 38 0 chr2 184428085 184428165 -68828418 + MIR3 SINE MIR 96 178 -30 260 196 52 10 chr2 184429152 184429249 -68827334 + (TA)n Simple_repeat Simple_repeat 2 102 0 21 0 0 0 chr2 184429678 184429699 -68826884 + AT_rich Low_complexity Low_complexity 1 21 0 267 312 52 0 chr2 184429724 184429801 -68826782 + MIR3 SINE MIR 74 154 -54 2558 66 0 3 chr2 184430376 184430681 -68825902 + AluY SINE Alu 1 304 -7 420 222 33 62 chr2 184433361 184433500 -68823083 - MIR3 SINE MIR -8 200 63 196 284 200 0 chr2 184435371 184435466 -68821117 - L2 LINE L2 0 3313 3200 232 300 71 0 chr2 184436245 184436315 -68820268 + L2 LINE L2 3198 3272 0 324 64 0 0 chr2 184436633 184436680 -68819903 + (TG)n Simple_repeat Simple_repeat 2 48 0 1150 155 11 11 chr2 184437351 184437538 -68819045 + AluJo SINE Alu 2 188 -124 459 330 39 15 chr2 184437856 184438062 -68818521 + MIR SINE MIR 11 221 -41 27 0 0 0 chr2 184438111 184438138 -68818445 + AT_rich Low_complexity Low_complexity 1 27 0 354 288 192 14 chr2 184438419 184438565 -68818018 + MIR3 SINE MIR 9 180 -28 2101 85 13 53 chr2 184438780 184439098 -68817485 + AluSq SINE Alu 1 305 -8 426 39 0 0 chr2 184441113 184441165 -68815418 + (TG)n Simple_repeat Simple_repeat 2 53 0 429 20 0 0 chr2 184441778 184441828 -68814755 + (TG)n Simple_repeat Simple_repeat 1 50 0 711 116 0 0 chr2 184441828 184441940 -68814643 - LTR9B LTR ERV1 -86 558 447 252 0 0 0 chr2 184443093 184443121 -68813462 + (A)n Simple_repeat Simple_repeat 1 28 0 580 250 69 48 chr2 184444677 184444902 -68811681 + MIR SINE MIR 34 262 0 329 280 0 47 chr2 184445265 184445453 -68811130 - MIR SINE MIR -1 261 2 209 194 0 32 chr2 184447659 184447721 -68808862 + GA-rich Low_complexity Low_complexity 3 62 0 194 329 43 14 chr2 184448826 184448896 -68807687 - MIR SINE MIR -27 235 164 * 290 273 167 13 chr2 184448895 184449045 -68807538 + MIR SINE MIR 76 248 -14 598 290 24 28 chr2 184449294 184449546 -68807037 - L1ME LINE L1 -304 5817 5567 266 228 33 33 chr2 184449830 184449922 -68806661 - MIR SINE MIR -3 259 168 400 313 95 80 chr2 184450802 184451324 -68805259 + L2 LINE L2 2721 3260 -12 225 0 0 0 chr2 184452127 184452152 -68804431 + (TA)n Simple_repeat Simple_repeat 1 25 0 2640 203 24 13 chr2 184453694 184454247 -68802336 + L1ME3 LINE L1 5597 6155 -7 394 208 19 57 chr2 184454992 184455098 -68801485 - MIR3 SINE MIR -11 197 96 439 284 126 10 chr2 184455419 184455625 -68800958 + MIR SINE MIR 25 252 -10 4216 121 19 6 chr2 184456995 184457679 -68798904 - L1MA8 LINE L1 -7 6284 5592 339 180 220 10 chr2 184457704 184457804 -68798779 - L2 LINE L2 -1 3312 3192 394 315 68 23 chr2 184459091 184459275 -68797308 - MIR SINE MIR -10 252 58 354 218 218 0 chr2 184460021 184460145 -68796438 - L1ME4a LINE L1 -17 6104 5954 * 784 256 53 35 chr2 184460139 184460484 -68796099 - L1ME4a LINE L1 -216 5905 5539 2295 88 0 53 chr2 184460878 184461198 -68795385 - AluSx SINE Alu -9 303 1 2237 96 3 0 chr2 184461251 184461578 -68795005 - AluSp SINE Alu 0 328 1 266 204 0 0 chr2 184462477 184462526 -68794057 + L2 LINE L2 3265 3313 0 212 316 184 26 chr2 184462533 184462685 -68793898 + MIR3 SINE MIR 10 185 -23 323 309 93 0 chr2 184462891 184462988 -68793595 - MIR SINE MIR -63 145 40 206 218 36 0 chr2 184463817 184463872 -68792711 + (TA)n Simple_repeat Simple_repeat 1 57 0 4077 224 79 44 chr2 184465248 184467000 -68789583 - L1MDb LINE L1 -3846 2560 770 474 239 18 35 chr2 184467939 184468052 -68788531 - MER5A DNA MER1_type -72 117 7 305 326 35 14 chr2 184468388 184468532 -68788051 + MER58C DNA MER1_type 64 210 -5 1006 281 16 4 chr2 184468582 184468835 -68787748 + MIR SINE MIR 7 262 0 299 250 89 9 chr2 184469003 184469115 -68787468 + L1ME4a LINE L1 5968 6088 -33 261 247 39 0 chr2 184470836 184470913 -68785670 - Tigger1 DNA MER2_type -1403 1015 936 1058 185 27 0 chr2 184471148 184471332 -68785251 + MER5A DNA MER1_type 1 189 0 831 257 0 6 chr2 184471338 184471509 -68785074 - MER5B DNA MER1_type -8 170 1 257 253 0 38 chr2 184472250 184472329 -68784254 + MIR SINE MIR 149 224 -38 2526 35 3 6 chr2 184472571 184472887 -68783696 - L1PA4 LINE L1 0 6155 5841 915 284 8 16 chr2 184477698 184477955 -68778628 + MIR SINE MIR 8 262 0 22 0 0 0 chr2 184478498 184478520 -68778063 + AT_rich Low_complexity Low_complexity 1 22 0 474 269 50 22 chr2 184479454 184479636 -68776947 + MLT1J2 LTR MaLR 253 439 -11 2290 170 41 5 chr2 184479679 184480091 -68776492 + MSTA LTR MaLR 1 427 -1 210 254 115 69 chr2 184480264 184480394 -68776189 + MIR3 SINE MIR 14 149 -59 220 279 63 25 chr2 184480458 184480537 -68776046 + MIR SINE MIR 96 177 -85 494 243 76 28 chr2 184480557 184480701 -68775882 - L2 LINE L2 0 3313 3163 224 276 35 0 chr2 184480716 184480803 -68775780 + MIR SINE MIR 173 262 0 464 227 38 30 chr2 184481457 184481589 -68774994 + MER94 DNA DNA 1 133 -1 1225 231 38 42 chr2 184482302 184482726 -68773857 - LTR16A LTR ERVL -5 445 24 845 194 61 17 chr2 184482751 184482931 -68773652 - MER5A DNA MER1_type -1 188 1 279 238 16 79 chr2 184483637 184483763 -68772820 + MLT1K LTR MaLR 470 587 -1 293 341 0 0 chr2 184484059 184484164 -68772419 - MIR SINE MIR -71 137 33 347 304 36 9 chr2 184485144 184485256 -68771327 - MER5A DNA MER1_type -74 115 1 396 369 12 6 chr2 184486591 184486751 -68769832 - L2 LINE L2 -8 3264 3104 1276 219 41 44 chr2 184487031 184487420 -68769163 + MLT1B LTR MaLR 3 390 0 515 232 14 43 chr2 184487615 184487753 -68768830 + MIR3 SINE MIR 15 148 -60 1915 197 17 3 chr2 184487971 184488331 -68768252 + MLT1A1 LTR MaLR 1 365 0 196 304 122 17 chr2 184489628 184489743 -68766840 + MIR3 SINE MIR 14 140 -68 365 272 68 28 chr2 184490573 184490726 -68765857 + MIR3 SINE MIR 8 154 -54 239 296 0 0 chr2 184491797 184491868 -68764715 + MIR SINE MIR 167 237 -25 1862 146 7 19 chr2 184493477 184493786 -68762797 - AluSx SINE Alu -7 305 1 2366 91 0 0 chr2 184493794 184494090 -68762493 - AluSq SINE Alu -17 296 1 190 135 269 0 chr2 184494201 184494253 -68762330 + L2 LINE L2 3207 3272 0 374 297 77 26 chr2 184495104 184495259 -68761324 + MIR3 SINE MIR 35 197 -11 336 247 11 0 chr2 184495482 184495571 -68761012 + MLT1B LTR MaLR 35 124 -266 622 347 15 5 chr2 184495584 184495783 -68760800 - MIR SINE MIR -56 206 6 1350 179 108 28 chr2 184496745 184497098 -68759485 - MLT1B LTR MaLR -9 381 1 714 303 170 30 chr2 184497233 184497628 -68758955 - L2 LINE L2 -112 3201 2863 2106 156 79 22 chr2 184497628 184498031 -68758552 - MSTB LTR MaLR 0 426 1 714 303 170 30 chr2 184498031 184498446 -68758137 - L2 LINE L2 -450 2863 2269 1197 245 38 27 chr2 184498882 184499238 -68757345 + L1ME3A LINE L1 5774 6134 -36 2287 214 45 20 chr2 184499319 184499824 -68756759 - LTR40a LTR ERVL -1 518 1 2559 44 0 0 chr2 184500176 184500472 -68756111 + AluY SINE Alu 1 296 -15 570 284 99 15 chr2 184501190 184501391 -68755192 - MIR SINE MIR -11 251 34 22 0 0 0 chr2 184501391 184501413 -68755170 + AT_rich Low_complexity Low_complexity 1 22 0 2215 105 10 0 chr2 184501493 184501789 -68754794 - AluSq SINE Alu -14 299 1 2454 58 0 3 chr2 184502218 184502510 -68754073 + AluY SINE Alu 1 291 -20 1091 320 16 14 chr2 184502760 184503188 -68753395 + LTR16A LTR ERVL 16 444 -6 2206 124 0 0 chr2 184503937 184504235 -68752348 - AluSx SINE Alu -14 298 1 21 0 0 0 chr2 184504862 184504883 -68751700 + AT_rich Low_complexity Low_complexity 1 21 0 411 289 69 56 chr2 184505560 184505871 -68750712 - MLT1J2 LTR MaLR 0 415 101 1680 156 25 7 chr2 184506606 184506889 -68749694 - AluJo SINE Alu -18 294 7 261 295 139 32 chr2 184507185 184507466 -68749117 - L2 LINE L2 -687 2627 2317 274 279 0 0 chr2 184508047 184508108 -68748475 + L2 LINE L2 3212 3272 0 205 302 0 0 chr2 184511514 184511567 -68745016 + (CGTG)n Simple_repeat Simple_repeat 1 53 0 549 0 0 0 chr2 184511975 184512036 -68744547 + (TG)n Simple_repeat Simple_repeat 1 61 0 25 31 0 0 chr2 184512635 184512667 -68743916 + AT_rich Low_complexity Low_complexity 1 32 0 346 311 0 90 chr2 184512874 184513096 -68743487 - L2 LINE L2 0 3313 3112 1611 144 3 61 chr2 184513198 184513511 -68743072 + AluJo SINE Alu 5 299 -13 624 253 107 22 chr2 184515467 184515692 -68740891 + MIR SINE MIR 1 244 -18 1767 138 3 80 chr2 184517938 184518265 -68738318 + AluSx SINE Alu 1 302 -10 367 292 103 19 chr2 184518274 184518433 -68738150 - MIR SINE MIR -53 209 30 21 0 0 0 chr2 184519281 184519302 -68737281 + AT_rich Low_complexity Low_complexity 1 21 0 456 133 18 106 chr2 184519649 184519762 -68736821 + MIR SINE MIR 68 170 -92 2453 126 88 26 chr2 184521632 184521698 -68734885 - Tigger2 DNA MER2_type 0 2718 2658 2381 94 3 0 chr2 184521698 184521996 -68734587 + AluSx SINE Alu 1 299 -13 2453 126 88 26 chr2 184521996 184522349 -68734234 - Tigger2 DNA MER2_type -60 2658 2273 463 145 0 0 chr2 184522339 184522408 -68734175 - Tigger2 DNA MER2_type -2649 69 1 * 209 346 62 50 chr2 184522495 184523038 -68733545 + L2 LINE L2 2638 3191 -81 244 214 0 36 chr2 184523090 184523146 -68733437 - L2 LINE L2 -24 3289 3236 597 266 98 6 chr2 184523347 184523520 -68733063 + MIR SINE MIR 30 218 -44 375 349 23 0 chr2 184524238 184524370 -68732213 + MIR SINE MIR 84 218 -44 21 0 0 0 chr2 184525202 184525223 -68731360 + AT_rich Low_complexity Low_complexity 1 21 0 245 349 59 0 chr2 184525929 184526081 -68730502 - MIR SINE MIR -8 254 94 812 243 27 69 chr2 184526969 184527294 -68729289 - L1MC/D LINE L1 -334 5787 5518 386 287 33 33 chr2 184527485 184527635 -68728948 - L3b LINE CR1 -88 1495 1346 240 35 0 0 chr2 184527865 184527894 -68728689 + (TG)n Simple_repeat Simple_repeat 2 30 0 261 0 0 0 chr2 184531098 184531127 -68725456 + (TTCA)n Simple_repeat Simple_repeat 2 30 0 2883 10 0 0 chr2 184532119 184532429 -68724154 + AluYa5 SINE Alu 1 310 -1 620 311 29 19 chr2 184533454 184533660 -68722923 + MIR SINE MIR 55 262 0 2498 96 48 20 chr2 184536822 184537176 -68719407 + THE1B LTR MaLR 1 364 0 12224 97 10 2 chr2 184537176 184538745 -68717838 + THE1B-int LTR MaLR 1 1580 0 2383 133 42 14 chr2 184538745 184539099 -68717484 + THE1B LTR MaLR 1 364 0 262 352 8 23 chr2 184539398 184539526 -68717057 - L2 LINE L2 -548 2766 2641 1437 198 16 110 chr2 184539549 184539868 -68716715 + AluJb SINE Alu 1 289 -13 29 28 0 0 chr2 184540325 184540361 -68716222 + AT_rich Low_complexity Low_complexity 1 36 0 657 252 12 83 chr2 184540376 184540505 -68716078 - MIR SINE MIR -16 246 140 1987 124 43 3 chr2 184540505 184540787 -68715796 - AluSx SINE Alu -17 295 3 657 252 12 83 chr2 184540787 184540899 -68715684 - MIR SINE MIR -122 140 22 210 348 51 51 chr2 184542046 184542164 -68714419 + MIR SINE MIR 25 142 -66 412 243 68 84 chr2 184542266 184542517 -68714066 - MER102b DNA MER1_type -35 306 60 460 81 32 0 chr2 184542692 184542754 -68713829 - L1MA9 LINE L1 -4 6308 6245 266 119 0 0 chr2 184542811 184542853 -68713730 - MIR SINE MIR -102 160 119 25 65 0 0 chr2 184542896 184542942 -68713641 + AT_rich Low_complexity Low_complexity 1 46 0 446 258 66 0 chr2 184547302 184547453 -68709130 - MER69 DNA AcHobo -4 2522 2362 * 2103 178 36 42 chr2 184547444 184547857 -68708726 + MSTB1 LTR MaLR 29 432 0 892 201 75 45 chr2 184547857 184548138 -68708445 - MER69 DNA AcHobo -160 2366 2077 751 202 62 10 chr2 184548733 184548926 -68707657 + MER69 DNA AcHobo 2095 2297 -229 318 258 201 63 chr2 184549270 184549429 -68707154 + MIR SINE MIR 71 251 -11 211 308 0 0 chr2 184550692 184550744 -68705839 - MIR3 SINE MIR -42 166 115 2269 126 134 13 chr2 184550875 184551255 -68705328 + MSTB LTR MaLR 1 426 0 25 31 0 0 chr2 184552540 184552572 -68704011 + AT_rich Low_complexity Low_complexity 1 32 0 315 300 54 15 chr2 184553243 184553373 -68703210 - MIR SINE MIR 0 262 128 481 256 128 54 chr2 184553461 184553703 -68702880 + L2 LINE L2 3054 3313 0 344 169 92 0 chr2 184553724 184553789 -68702794 - MIR SINE MIR -136 126 56 210 162 0 0 chr2 184554419 184554456 -68702127 + L2 LINE L2 3277 3313 0 199 203 31 0 chr2 184555080 184555144 -68701439 + CT-rich Low_complexity Low_complexity 3 68 0 332 282 8 57 chr2 184556345 184556469 -68700114 - MLT1H LTR MaLR -1 548 431 210 219 37 37 chr2 184557257 184557339 -68699244 + (TATG)n Simple_repeat Simple_repeat 3 84 0 730 305 139 17 chr2 184559351 184559754 -68696829 + L2 LINE L2 2862 3313 0 1473 209 4 0 chr2 184560398 184560671 -68695912 + AluJo SINE Alu 3 276 -36 514 191 0 11 chr2 184560820 184560914 -68695669 + MIR SINE MIR 52 144 -118 1044 61 8 15 chr2 184561136 184561267 -68695316 + AluYb8 SINE Alu 1 130 -188 42969 34 28 1 chr2 184561269 184567262 -68689321 + L1PA3 LINE L1 5 6155 0 1412 79 0 6 chr2 184567270 184567448 -68689135 + AluY SINE Alu 118 294 -17 328 363 47 5 chr2 184567467 184567679 -68688904 - L1M4 LINE L1 -1168 4978 4758 240 332 76 17 chr2 184567708 184567997 -68688586 - L1M4 LINE L1 -1440 4706 4401 2716 205 101 59 chr2 184568079 184569087 -68687496 + L1MC5 LINE L1 6390 7441 -520 813 217 156 0 chr2 184572116 184572392 -68684191 + MER5C DNA MER1_type 6 324 0 186 133 0 0 chr2 184572639 184572669 -68683914 + (TAG)n Simple_repeat Simple_repeat 1 30 0 342 299 37 0 chr2 184574830 184574937 -68681646 - MIR SINE MIR -71 191 81 344 287 239 11 chr2 184575024 184575212 -68681371 + L2 LINE L2 2305 2535 -779 188 135 27 0 chr2 184575374 184575411 -68681172 + GA-rich Low_complexity Low_complexity 2 39 0 404 219 44 58 chr2 184575528 184575665 -68680918 - MIR SINE MIR -49 213 79 3410 32 5 0 chr2 184575785 184576164 -68680419 + L1PA7 LINE L1 5771 6151 -3 192 77 0 0 chr2 184576245 184576271 -68680312 + (TCC)n Simple_repeat Simple_repeat 2 27 0 26 50 0 0 chr2 184579828 184579868 -68676715 + AT_rich Low_complexity Low_complexity 1 40 0 455 211 21 7 chr2 184580259 184580401 -68676182 + GA-rich Low_complexity Low_complexity 2 145 0 1748 124 50 37 chr2 184580461 184580759 -68675824 - AluSc SINE Alu -7 302 1 968 132 0 26 chr2 184580849 184581001 -68675582 + FRAM SINE Alu 16 163 -13 2401 63 0 3 chr2 184581275 184581585 -68674998 + L1PA7 LINE L1 5852 6160 0 297 0 0 0 chr2 184581728 184581761 -68674822 + (CA)n Simple_repeat Simple_repeat 2 34 0 428 192 77 71 chr2 184586745 184586927 -68669656 + MIR SINE MIR 70 252 -10 608 285 77 24 chr2 184587128 184587374 -68669209 - MIR SINE MIR -2 260 2 609 306 73 38 chr2 184588147 184588542 -68668041 + MLT1I LTR MaLR 1 409 0 274 305 0 0 chr2 184588806 184588901 -68667682 + A-rich Low_complexity Low_complexity 1 95 0 236 264 14 56 chr2 184588986 184589058 -68667525 + L2 LINE L2 3204 3272 0 208 267 0 0 chr2 184589714 184589759 -68666824 + (TG)n Simple_repeat Simple_repeat 1 45 0 385 309 31 26 chr2 184590943 184591139 -68665444 + L1MC/D LINE L1 5665 5863 -346 206 180 20 40 chr2 184591192 184591242 -68665341 - MIR SINE MIR -62 146 98 193 324 29 15 chr2 184591530 184591598 -68664985 + MIR3 SINE MIR 91 159 -49 253 77 58 0 chr2 184593086 184593138 -68663445 + A-rich Low_complexity Low_complexity 1 55 0 25 75 0 0 chr2 184593301 184593354 -68663229 + AT_rich Low_complexity Low_complexity 1 53 0 789 224 19 0 chr2 184594348 184594509 -68662074 + MER5A DNA MER1_type 26 189 0 283 303 30 81 chr2 184594556 184594754 -68661829 - L2 LINE L2 -220 3052 2865 391 256 10 103 chr2 184594776 184594924 -68661659 - MIR SINE MIR 0 262 136 2197 122 0 0 chr2 184594924 184595228 -68661355 + AluSx SINE Alu 1 304 -8 391 256 10 103 chr2 184595228 184595282 -68661301 - MIR SINE MIR -126 136 79 825 231 0 6 chr2 184595686 184595855 -68660728 - MIR SINE MIR -14 248 81 461 238 18 77 chr2 184596000 184596168 -68660415 - MER5B DNA MER1_type 0 178 21 225 272 54 43 chr2 184596203 184596295 -68660288 - L2 LINE L2 -12 3260 3168 3484 80 0 0 chr2 184597910 184598347 -68658236 + L1PA14 LINE L1 5722 6158 -3 313 252 97 0 chr2 184598631 184598734 -68657849 - L1ME4a LINE L1 -45 6076 5964 681 290 108 31 chr2 184598919 184599572 -68657011 - L1ME4a LINE L1 -241 5929 5219 565 231 69 121 chr2 184599798 184600000 -68656583 - L1MC4a LINE L1 -1913 5895 5721 2227 109 9 3 chr2 184600000 184600320 -68656263 + L1MA2 LINE L1 5983 6304 0 565 231 69 121 chr2 184600320 184600507 -68656076 - L1MC4a LINE L1 -2087 5721 5526 181 282 0 42 chr2 184600536 184600607 -68655976 - MIR SINE MIR 0 262 195 938 265 36 45 chr2 184600618 184601089 -68655494 - L1MC5 LINE L1 -44 7917 7451 625 299 107 14 chr2 184601221 184601566 -68655017 - L1ME4a LINE L1 -1032 5114 4738 1308 306 145 38 chr2 184602736 184603000 -68653583 - L2 LINE L2 0 3313 3079 2141 115 16 3 chr2 184603000 184603305 -68653278 + AluSx SINE Alu 1 309 -3 1308 306 145 38 chr2 184603305 184604292 -68652291 - L2 LINE L2 -234 3079 1925 469 280 103 21 chr2 184604594 184604837 -68651746 + L1ME LINE L1 5548 5810 -311 627 284 152 66 chr2 184605049 184605597 -68650986 + L2 LINE L2 2665 3272 0 688 317 107 27 chr2 184605735 184606183 -68650400 + L2 LINE L2 2476 2959 -355 337 274 36 0 chr2 184606259 184606343 -68650240 + L2 LINE L2 3227 3313 0 713 162 13 49 chr2 184606378 184606625 -68649958 + MSTB1 LTR MaLR 1 277 -155 * 1308 144 0 62 chr2 184606614 184606857 -68649726 + MSTB1 LTR MaLR 201 428 -4 226 284 108 29 chr2 184607535 184607637 -68648946 - MIR3 SINE MIR -7 201 92 215 137 20 39 chr2 184607944 184607995 -68648588 + (GAATG)n Simple_repeat Simple_repeat 5 54 0 547 328 43 17 chr2 184607995 184608227 -68648356 + L3 LINE CR1 1324 1561 -16 1033 213 52 27 chr2 184608249 184608568 -68648015 - MLT1A2 LTR MaLR 0 374 1 192 192 0 151 chr2 184608841 184608914 -68647669 - L3 LINE CR1 -1 1576 1515 610 253 39 17 chr2 184614822 184615000 -68641583 - MIR SINE MIR -13 249 68 202 326 169 0 chr2 184615763 184615852 -68640731 + L3 LINE CR1 1430 1533 -44 282 282 29 60 chr2 184615852 184616007 -68640576 - MER5A DNA MER1_type 0 189 28 21 0 0 0 chr2 184618223 184618244 -68638339 + AT_rich Low_complexity Low_complexity 1 21 0 2114 108 42 0 chr2 184618352 184618640 -68637943 + AluSg SINE Alu 1 300 -10 636 200 9 0 chr2 184620958 184621063 -68635520 + Tigger2 DNA MER2_type 2603 2708 -10 569 295 52 12 chr2 184623203 184623240 -68633343 - MIR SINE MIR -67 195 161 617 26 26 0 chr2 184623240 184623317 -68633266 + MADE1 DNA Mariner 1 79 -1 569 295 52 12 chr2 184623317 184623452 -68633131 - MIR SINE MIR -101 161 16 572 252 105 0 chr2 184623558 184623701 -68632882 + MIR SINE MIR 12 169 -93 668 276 16 0 chr2 184623740 184623932 -68632651 + L1ME1 LINE L1 3703 3897 -2249 2116 196 77 26 chr2 184623949 184624479 -68632104 + L1ME1 LINE L1 5258 5814 -352 2115 160 32 8 chr2 184624494 184624870 -68631713 - MLT1B LTR MaLR -5 385 1 940 231 97 28 chr2 184624871 184625221 -68631362 + L1ME1 LINE L1 5825 6149 -17 234 371 175 0 chr2 184625828 184625971 -68630612 - L2 LINE L2 -4 3268 3101 2335 210 65 35 chr2 184626068 184626800 -68629783 - MER21B LTR ERV1 -22 841 12 258 339 71 12 chr2 184627025 184627193 -68629390 - L2 LINE L2 -610 2704 2527 25 31 0 0 chr2 184627269 184627301 -68629282 + AT_rich Low_complexity Low_complexity 1 32 0 2277 215 117 19 chr2 184627486 184628118 -68628465 - L1ME1 LINE L1 -24 6076 5383 1358 223 13 20 chr2 184628120 184628514 -68628069 - L1ME1 LINE L1 -1062 5018 4628 4544 158 62 22 chr2 184628517 184629787 -68626796 - L1MA9 LINE L1 -104 6208 4900 4220 250 57 15 chr2 184629800 184631250 -68625333 - L1ME1 LINE L1 -1453 4627 3118 1563 254 71 9 chr2 184631235 184631974 -68624609 - L1ME1 LINE L1 -3824 2256 1475 * 384 158 73 0 chr2 184632005 184632087 -68624496 + L1MA8 LINE L1 5923 6010 -281 * 646 152 48 0 chr2 184632083 184632208 -68624375 - L1ME1 LINE L1 -4601 1479 1349 4213 143 14 20 chr2 184632247 184632478 -68624105 - L1MA8 LINE L1 -139 6152 5921 2341 160 21 0 chr2 184632478 184632866 -68623717 + MSTD LTR MaLR 1 396 0 4213 143 14 20 chr2 184632866 184633368 -68623215 - L1MA8 LINE L1 -370 5921 5424 349 179 0 0 chr2 184633380 184633447 -68623136 - AluJb SINE Alu -1 301 235 1109 172 0 0 chr2 184633447 184633616 -68622967 - AluJb SINE Alu -143 169 1 2567 130 8 127 chr2 184633616 184633754 -68622829 - L1MA8 LINE L1 -743 5403 5250 1129 93 6 0 chr2 184633754 184633915 -68622668 - L1MA6 LINE L1 -6 6294 6133 2567 130 8 127 chr2 184633915 184634282 -68622301 - L1MA8 LINE L1 -896 5250 4992 2144 166 67 12 chr2 184634282 184634686 -68621897 + MSTB LTR MaLR 1 426 0 2567 130 8 127 chr2 184634686 184634800 -68621783 - L1MA8 LINE L1 -1154 4992 4866 1042 205 40 68 chr2 184634798 184635046 -68621537 - L1ME1 LINE L1 -4714 1366 1129 * 1508 185 14 27 chr2 184635046 184635338 -68621245 - AluJo SINE Alu -22 290 3 1042 205 40 68 chr2 184635338 184635440 -68621143 - L1ME1 LINE L1 -4951 1129 1026 4121 219 68 47 chr2 184635442 184637786 -68618797 - L1MCb LINE L1 -3990 2574 3 1320 256 34 54 chr2 184637806 184638438 -68618145 - L1ME1 LINE L1 -5060 1023 391 365 331 84 46 chr2 184638867 184639190 -68617393 - L1ME1 LINE L1 -5730 340 6 247 302 47 12 chr2 184639217 184639303 -68617280 + MIR SINE MIR 110 198 -64 201 74 0 0 chr2 184639355 184639382 -68617201 + (CTG)n Simple_repeat Simple_repeat 3 29 0 493 297 51 6 chr2 184640229 184640404 -68616179 + MIR SINE MIR 22 204 -58 442 299 15 15 chr2 184641031 184641168 -68615415 - MIR SINE MIR -119 143 7 214 329 35 0 chr2 184641658 184641743 -68614840 - MIR SINE MIR -122 140 53 2128 110 48 42 chr2 184643304 184643658 -68612925 + THE1B LTR MaLR 9 364 0 608 302 84 13 chr2 184643897 184644122 -68612461 + MIR SINE MIR 2 242 -20 378 42 0 0 chr2 184644954 184645002 -68611581 + (CA)n Simple_repeat Simple_repeat 2 49 0 217 71 0 0 chr2 184645699 184645727 -68610856 + MIR SINE MIR 225 252 -10 207 268 0 0 chr2 184645727 184645740 -68610843 + L2 LINE L2 3229 3269 -3 1605 142 13 66 chr2 184645848 184646151 -68610432 + AluJo SINE Alu 18 304 -8 245 279 115 19 chr2 184646487 184646591 -68609992 + MLT1K LTR MaLR 135 248 -340 6176 63 0 1 chr2 184646634 184647411 -68609172 + L1PA6 LINE L1 5379 6154 0 192 125 0 0 chr2 184647421 184647453 -68609130 + (A)n Simple_repeat Simple_repeat 1 32 0 872 168 42 16 chr2 184647671 184647862 -68608721 + MER63 DNA MER1_type 807 1002 -58 255 204 0 0 chr2 184647952 184648006 -68608577 + (CATATA)n Simple_repeat Simple_repeat 3 56 0 229 332 88 14 chr2 184648109 184648404 -68608179 - L1 LINE L1 -1095 5051 4735 396 0 0 0 chr2 184648682 184648726 -68607857 + (TA)n Simple_repeat Simple_repeat 2 45 0 24 0 0 0 chr2 184648759 184648783 -68607800 + AT_rich Low_complexity Low_complexity 1 24 0 2473 73 0 0 chr2 184648905 184649207 -68607376 - AluSc SINE Alu -7 302 1 455 276 180 6 chr2 184649255 184649610 -68606973 - L1 LINE L1 -1931 4215 3799 219 133 0 0 chr2 184650550 184650580 -68606003 - L2 LINE L2 -20 3293 3264 184 329 53 0 chr2 184651033 184651109 -68605474 - MIR SINE MIR -97 165 86 604 327 23 12 chr2 184651123 184651380 -68605203 + MIR SINE MIR 3 262 0 188 191 0 48 chr2 184652302 184652344 -68604239 - MIR SINE MIR -102 106 67 4468 121 18 39 chr2 184653045 184653819 -68602764 - L1MA8 LINE L1 -165 6126 5369 276 100 0 0 chr2 184653930 184653970 -68602613 + (TAG)n Simple_repeat Simple_repeat 1 40 0 180 300 192 7 chr2 184654200 184654497 -68602086 - L2 LINE L2 -1066 2248 1897 190 205 0 0 chr2 184655115 184655154 -68601429 - MIR SINE MIR -72 190 152 21 36 0 0 chr2 184655644 184655672 -68600911 + AT_rich Low_complexity Low_complexity 1 28 0 270 81 0 0 chr2 184655837 184655874 -68600709 + (TC)n Simple_repeat Simple_repeat 2 38 0 315 0 0 0 chr2 184655874 184655909 -68600674 + (CA)n Simple_repeat Simple_repeat 1 35 0 275 385 0 0 chr2 184658590 184658699 -68597884 - MIR3 SINE MIR -28 180 72 23 54 0 0 chr2 184659235 184659272 -68597311 + AT_rich Low_complexity Low_complexity 1 37 0 2265 87 0 40 chr2 184659427 184659749 -68596834 + AluY SINE Alu 2 310 -1 3566 105 90 5 chr2 184660455 184661057 -68595526 - L1MA3 LINE L1 0 6305 5653 1533 121 0 5 chr2 184662119 184662334 -68594249 + AluSq SINE Alu 1 214 -99 751 232 0 44 chr2 184662376 184662557 -68594026 + MER5B DNA MER1_type 1 173 -5 5196 150 56 7 chr2 184662611 184664234 -68592349 - L1PB4 LINE L1 -14 6142 4436 214 311 57 38 chr2 184665517 184665623 -68590960 - MIR SINE MIR -85 123 16 2362 232 57 65 chr2 184665807 184666565 -68590018 + MER20B DNA MER1_type 2 753 -30 464 249 52 46 chr2 184666920 184667093 -68589490 + MIR SINE MIR 39 212 -50 3112 106 11 15 chr2 184668979 184669434 -68587149 + L1PA13 LINE L1 5708 6160 -3 338 282 107 0 chr2 184671762 184671893 -68584690 - MIR SINE MIR 0 262 118 605 214 65 60 chr2 184671973 184672174 -68584409 - MER63A DNA MER1_type -8 202 1 1548 151 34 128 chr2 184672385 184672769 -68583814 - MER7A DNA MER2_type 0 346 1 1074 140 23 0 chr2 184673572 184673743 -68582840 - L1MC/D LINE L1 -632 5701 5527 1591 141 48 24 chr2 184673757 184674048 -68582535 + L1MC1 LINE L1 6024 6321 -12 1091 74 20 0 chr2 184674298 184674446 -68582137 + L1PA8 LINE L1 6017 6167 -5 1313 215 73 14 chr2 184674481 184674769 -68581814 + Tigger5 DNA MER2_type 3 307 -2016 1325 157 9 0 chr2 184674774 184674984 -68581599 + Tigger5 DNA MER2_type 2112 2323 0 238 296 41 71 chr2 184675001 184675170 -68581413 + MIR3 SINE MIR 30 193 -15 205 289 94 78 chr2 184676099 184676227 -68580356 + L2 LINE L2 3116 3245 -27 * 335 241 13 0 chr2 184676223 184676302 -68580281 + MIR SINE MIR 113 192 -70 2085 119 10 0 chr2 184676343 184676636 -68579947 - AluJb SINE Alu -16 296 1 23 33 0 0 chr2 184676638 184676668 -68579915 + AT_rich Low_complexity Low_complexity 1 30 0 311 365 7 7 chr2 184676707 184676852 -68579731 + MIR SINE MIR 47 191 -71 2889 27 0 0 chr2 184676855 184677192 -68579391 - L1PA4 LINE L1 -2 6153 5817 1591 171 24 24 chr2 184677551 184677838 -68578745 + AluJo SINE Alu 1 287 -25 189 0 0 0 chr2 184677838 184677859 -68578724 + (CATA)n Simple_repeat Simple_repeat 4 24 0 194 184 276 13 chr2 184678277 184678353 -68578230 - L2 LINE L2 0 3313 3218 1861 143 10 27 chr2 184678449 184678742 -68577841 - AluJo SINE Alu -22 290 3 1926 140 110 22 chr2 184681290 184681635 -68574948 + MER57A LTR ERV1 8 386 -17 1554 137 20 28 chr2 184681635 184681884 -68574699 - AluSx SINE Alu -65 247 1 2123 128 0 0 chr2 184682008 184682306 -68574277 + AluSg SINE Alu 1 298 -12 567 296 46 5 chr2 184682534 184682750 -68573833 + HAL1b LINE L1 447 671 -677 1935 134 31 7 chr2 184683272 184683564 -68573019 + AluSx SINE Alu 3 301 -11 180 111 0 0 chr2 184684184 184684211 -68572372 + (ATG)n Simple_repeat Simple_repeat 1 27 0 830 278 48 9 chr2 184684213 184684443 -68572140 - MIR SINE MIR -19 243 5 28 48 0 0 chr2 184684917 184684959 -68571624 + AT_rich Low_complexity Low_complexity 1 42 0 394 163 25 12 chr2 184685029 184685109 -68571474 + L1MA8 LINE L1 5066 5146 -1000 361 176 57 24 chr2 184685127 184685232 -68571351 + LOR1b LTR ERV1 143 263 -234 * 823 211 6 17 chr2 184685227 184685402 -68571181 + LOR1a LTR ERV1 317 489 -8 1239 156 25 3 chr2 184685411 184685742 -68570841 + L1MA8 LINE L1 5144 5479 -743 1712 192 3 3 chr2 184685841 184686148 -68570435 + LOR1a LTR ERV1 183 489 -8 3186 132 61 24 chr2 184686149 184686770 -68569813 + L1MA8 LINE L1 5641 6284 -7 345 282 88 28 chr2 184686892 184687073 -68569510 + L1ME4a LINE L1 4735 4926 -1220 6675 51 0 0 chr2 184687077 184687898 -68568685 + L1PA6 LINE L1 5331 6154 0 325 261 52 52 chr2 184688019 184688172 -68568411 + L1ME4a LINE L1 5077 5229 -917 455 277 124 48 chr2 184688326 184688705 -68567878 + LTR67 LTR ERVL 115 522 -35 523 264 94 13 chr2 184688936 184689171 -68567412 + L1ME4a LINE L1 5536 5789 -332 539 230 27 142 chr2 184690054 184690315 -68566268 - MLT1L LTR MaLR -337 278 48 244 207 128 50 chr2 184690428 184690607 -68565976 + L1ME4a LINE L1 5880 6072 -49 354 257 132 44 chr2 184690712 184690848 -68565735 + MIR SINE MIR 115 262 0 270 286 71 0 chr2 184690880 184690950 -68565633 - MIR SINE MIR -109 153 79 1900 178 81 3 chr2 184691120 184691502 -68565081 - L1MB7 LINE L1 -19 6165 5754 239 302 16 0 chr2 184691991 184692054 -68564529 + L3 LINE CR1 1512 1575 -2 464 258 154 11 chr2 184692975 184693157 -68563426 - MIR SINE MIR -35 227 20 22 56 0 0 chr2 184693214 184693250 -68563333 + AT_rich Low_complexity Low_complexity 1 36 0 2549 53 7 0 chr2 184693422 184693725 -68562858 - AluY SINE Alu -6 305 1 5232 102 14 4 chr2 184694036 184694798 -68561785 - L1PA14 LINE L1 -3 6158 5389 775 104 9 0 chr2 184694798 184694904 -68561679 - U6 snRNA snRNA 0 107 1 28 0 0 0 chr2 184694927 184694955 -68561628 + AT_rich Low_complexity Low_complexity 1 28 0 3066 205 95 12 chr2 184694955 184696352 -68560231 + L1ME1 LINE L1 4557 6069 -97 22 35 0 0 chr2 184697464 184697493 -68559090 + AT_rich Low_complexity Low_complexity 1 29 0 226 254 0 0 chr2 184698544 184698603 -68557980 - Charlie8 DNA MER1_type -2267 150 92 23 78 0 0 chr2 184700025 184700076 -68556507 + AT_rich Low_complexity Low_complexity 1 51 0 2307 74 0 0 chr2 184700105 184700409 -68556174 + AluY SINE Alu 1 304 0 255 329 52 114 chr2 184700516 184700841 -68555742 - L2 LINE L2 -17 3255 2951 22 0 0 0 chr2 184702327 184702349 -68554234 + AT_rich Low_complexity Low_complexity 1 22 0 687 272 17 11 chr2 184703848 184704028 -68552555 - MER5A DNA MER1_type -6 183 3 26 50 0 0 chr2 184705104 184705144 -68551439 + AT_rich Low_complexity Low_complexity 1 40 0 365 298 103 70 chr2 184705302 184705758 -68550825 + L1ME1 LINE L1 270 740 -5379 2228 98 0 7 chr2 184706545 184706850 -68549733 + AluY SINE Alu 1 303 -8 376 236 34 0 chr2 184708061 184708150 -68548433 + L1ME1 LINE L1 4246 4337 -1792 353 144 44 44 chr2 184708157 184708247 -68548336 - L1MA10 LINE L1 -4 6330 6241 361 223 37 3 chr2 184708266 184708351 -68548232 - L1MA10 LINE L1 -71 6253 6008 298 255 85 28 chr2 184708400 184708506 -68548077 - L1MEc LINE L1 -5168 1228 1117 1085 148 0 17 chr2 184708506 184708682 -68547901 - AluSg/x SINE Alu -3 309 137 994 227 104 8 chr2 184708687 184708947 -68547636 - L1MEc LINE L1 -6075 321 37 1170 199 31 71 chr2 184708950 184709014 -68547569 + L1ME1 LINE L1 4333 4398 -1731 1523 167 16 0 chr2 184709014 184709265 -68547318 + AluJb SINE Alu 1 255 -57 1170 199 31 71 chr2 184709265 184709623 -68546960 + L1ME1 LINE L1 4398 4738 -1391 600 248 16 0 chr2 184709623 184709748 -68546835 + FLAM_A SINE Alu 1 127 -15 1551 223 27 7 chr2 184709772 184710176 -68546407 + L1ME1 LINE L1 4733 5144 -985 1888 177 24 42 chr2 184710177 184710601 -68545982 + LTR52 LTR ERVL 1 416 -5 2816 211 57 28 chr2 184710603 184711361 -68545222 + L1ME1 LINE L1 5142 5905 -244 5209 102 29 87 chr2 184711378 184712346 -68544237 - Tigger3b DNA MER2_type -51 1180 269 391 225 135 0 chr2 184712340 184712429 -68544154 - Tigger3b DNA MER2_type -1129 102 2 * 652 220 69 17 chr2 184712457 184712630 -68543953 + L1ME1 LINE L1 5966 6147 -2 634 186 0 0 chr2 184712707 184712809 -68543774 + Tigger3b DNA MER2_type 1 102 -1129 * 5399 124 54 6 chr2 184712807 184713043 -68543540 + Tigger3b DNA MER2_type 274 497 -2531 423 38 0 0 chr2 184713043 184713096 -68543487 + (TG)n Simple_repeat Simple_repeat 2 54 0 5399 124 54 6 chr2 184713096 184713773 -68542810 + Tigger3b DNA MER2_type 497 1231 0 184 284 0 60 chr2 184713839 184713906 -68542677 - MIR SINE MIR -88 120 58 1545 211 39 20 chr2 184714003 184714359 -68542224 - MLT1A1 LTR MaLR -2 363 1 3244 101 16 0 chr2 184714768 184715214 -68541369 + MLT2A2 LTR ERVL 1 453 0 246 292 108 76 chr2 184716631 184716816 -68539767 - MIR3 SINE MIR 0 208 18 376 279 93 14 chr2 184717082 184717222 -68539361 - L2 LINE L2 0 3313 3163 256 164 55 41 chr2 184717291 184717364 -68539219 - MER4-int LTR ERV1 -5423 1175 1102 2221 176 75 21 chr2 184717633 184718110 -68538473 + MLT1D LTR MaLR 1 503 -2 288 152 0 0 chr2 184718169 184718215 -68538368 + MLT1B LTR MaLR 144 189 -201 1753 161 30 72 chr2 184719242 184719435 -68537148 + MLT1B LTR MaLR 1 170 -220 2079 108 7 27 chr2 184719435 184719730 -68536853 + AluSx SINE Alu 4 292 -20 1753 161 30 72 chr2 184719730 184719941 -68536642 + MLT1B LTR MaLR 170 388 -2 479 265 26 74 chr2 184720088 184720277 -68536306 - MIR3 SINE MIR -8 200 21 442 311 0 0 chr2 184721193 184721296 -68535287 + MER5A DNA MER1_type 7 109 -80 282 323 52 45 chr2 184722136 184722291 -68534292 + MIR SINE MIR 57 212 -50 284 164 0 18 chr2 184722762 184722817 -68533766 - L1MDa LINE L1 -1193 5347 5294 4220 250 57 15 chr2 184722830 184724280 -68532303 - L1MDa LINE L1 -1453 5087 3578 1344 254 76 11 chr2 184724265 184724996 -68531587 - L1MDa LINE L1 -3896 2644 1943 * 608 149 155 50 chr2 184724996 184725146 -68531437 + MER57A LTR ERV1 217 386 -17 1452 136 24 36 chr2 184725146 184725396 -68531187 - AluSx SINE Alu -65 247 1 2142 128 0 0 chr2 184725520 184725818 -68530765 + AluSg SINE Alu 1 298 -12 510 311 19 5 chr2 184726053 184726262 -68530321 + HAL1b LINE L1 460 671 -677 1959 134 31 7 chr2 184726784 184727076 -68529507 + AluSx SINE Alu 3 301 -11 180 111 0 0 chr2 184727696 184727723 -68528860 + (ATG)n Simple_repeat Simple_repeat 1 27 0 833 278 48 9 chr2 184727725 184727955 -68528628 - MIR SINE MIR -19 243 5 28 48 0 0 chr2 184728429 184728471 -68528112 + AT_rich Low_complexity Low_complexity 1 42 0 370 163 25 12 chr2 184728541 184728621 -68527962 + L1MA8 LINE L1 5066 5146 -1000 766 199 8 23 chr2 184728639 184728914 -68527669 + LOR1a LTR ERV1 143 489 -8 1170 156 25 3 chr2 184728923 184729254 -68527329 + L1MA8 LINE L1 5144 5479 -743 1658 194 3 3 chr2 184729353 184729668 -68526915 + LOR1a LTR ERV1 183 497 0 2249 133 62 20 chr2 184729668 184730120 -68526463 + L1MA8 LINE L1 5647 6117 -174 2081 115 36 0 chr2 184730539 184730817 -68525766 - AluSx SINE Alu -24 288 1 622 280 63 48 chr2 184731122 184731454 -68525129 + MLT1H LTR MaLR 8 344 -205 890 180 21 32 chr2 184731784 184731973 -68524610 - MER5A DNA MER1_type -1 188 2 266 0 29 0 chr2 184732522 184732556 -68524027 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 289 333 45 30 chr2 184733124 184733256 -68523327 - L2 LINE L2 -5 3308 3175 196 263 171 0 chr2 184733275 184733351 -68523232 - L2 LINE L2 -5 3308 3220 228 319 0 0 chr2 184733708 184733777 -68522806 - L2 LINE L2 -529 2785 2717 2742 209 60 3 chr2 184733821 184734433 -68522150 - MER82 DNA MER2_type 0 653 7 889 276 109 41 chr2 184734438 184734851 -68521732 - L2 LINE L2 -643 2671 2231 416 323 103 18 chr2 184734851 184735074 -68521509 - L2 LINE L2 -1237 2077 1836 26 0 0 0 chr2 184735176 184735202 -68521381 + AT_rich Low_complexity Low_complexity 1 26 0 213 351 14 0 chr2 184735342 184735416 -68521167 - MIR SINE MIR -69 139 65 462 299 34 53 chr2 184735780 184735987 -68520596 - L2 LINE L2 -1 3312 3110 419 248 277 0 chr2 184737599 184737736 -68518847 + MER5A DNA MER1_type 9 183 -6 621 162 0 124 chr2 184738167 184738273 -68518310 + MER3 DNA MER1_type 2 120 -42 1841 171 8 58 chr2 184738273 184738666 -68517917 - MER93b LTR ERV1 0 373 1 621 162 0 124 chr2 184738666 184738732 -68517851 + MER3 DNA MER1_type 120 152 -10 2150 122 7 0 chr2 184738732 184739036 -68517547 - AluSg1 SINE Alu -3 306 1 758 121 8 15 chr2 184739036 184739168 -68517415 - MER3 DNA MER1_type -43 166 36 41 36 0 0 chr2 184739637 184739692 -68516891 + AT_rich Low_complexity Low_complexity 1 55 0 705 301 31 9 chr2 184740169 184740398 -68516185 - MIR SINE MIR -1 261 28 14289 129 21 17 chr2 184742059 184742717 -68513866 + Tigger1 DNA MER2_type 1 655 -1763 2556 119 38 24 chr2 184742717 184743137 -68513446 + MSTB LTR MaLR 1 426 0 14289 129 21 17 chr2 184743137 184744887 -68511696 + Tigger1 DNA MER2_type 655 2418 0 1680 196 128 9 chr2 184745174 184745668 -68510915 + MER39 LTR ERV1 4 707 0 1316 180 173 53 chr2 184746033 184746466 -68510117 + MER31A LTR ERV1 1 485 0 1463 222 17 28 chr2 184746791 184747151 -68509432 + MLT1A1 LTR MaLR 1 356 -9 1923 155 3 13 chr2 184747548 184747852 -68508731 + AluSx SINE Alu 1 301 -11 7633 31 0 0 chr2 184747921 184749095 -68507488 + L1PA3 LINE L1 4972 6148 -7 183 42 0 0 chr2 184749095 184749119 -68507464 + (TTAAA)n Simple_repeat Simple_repeat 4 27 0 189 0 0 0 chr2 184749880 184749901 -68506682 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 261 268 0 0 chr2 184751151 184751207 -68505376 + GA-rich Low_complexity Low_complexity 1 56 0 560 266 39 0 chr2 184752064 184752192 -68504391 - L2 LINE L2 -21 3292 3160 358 262 111 8 chr2 184752400 184752526 -68504057 - LTR67 LTR ERVL 0 557 419 2312 184 41 9 chr2 184752596 184753057 -68503526 - MER70B LTR ERVL -102 476 1 263 309 102 47 chr2 184753098 184753354 -68503229 - LTR67 LTR ERVL -263 294 25 288 328 168 0 chr2 184753933 184754058 -68502525 + L2 LINE L2 3125 3270 -2 499 242 62 92 chr2 184754568 184755002 -68501581 - MLT1H LTR MaLR 0 549 129 231 338 39 13 chr2 184755331 184755408 -68501175 + L2 LINE L2 3204 3282 -31 420 279 97 26 chr2 184755413 184755567 -68501016 - L2 LINE L2 -4 3268 3104 317 346 60 21 chr2 184755604 184755838 -68500745 - L2 LINE L2 -645 2669 2427 448 137 0 51 chr2 184760794 184760911 -68495672 + (GGAA)n Simple_repeat Simple_repeat 4 114 0 246 156 0 0 chr2 184761495 184761540 -68495043 + (TG)n Simple_repeat Simple_repeat 2 46 0 227 270 105 28 chr2 184761996 184762567 -68494016 + L1MC4 LINE L1 7292 8039 -3 342 61 0 0 chr2 184762952 184763001 -68493582 + (TC)n Simple_repeat Simple_repeat 1 49 0 423 0 0 0 chr2 184763001 184763048 -68493535 + (TA)n Simple_repeat Simple_repeat 2 48 0 626 139 0 6 chr2 184763048 184763286 -68493297 - AluJb SINE Alu -27 285 1 400 291 105 14 chr2 184763355 184763532 -68493051 - MIR SINE MIR -54 208 15 2232 86 0 51 chr2 184763786 184764101 -68492482 + AluY SINE Alu 1 299 -12 1515 196 28 6 chr2 184764244 184764571 -68492012 + L1MB8 LINE L1 5835 6168 -10 1225 294 97 19 chr2 184764667 184765140 -68491443 - L2 LINE L2 0 3313 2804 369 162 9 76 chr2 184765177 184765282 -68491301 + MER94 DNA DNA 37 134 0 554 305 23 11 chr2 184766033 184766210 -68490373 - MIR SINE MIR 0 262 84 197 196 78 39 chr2 184766920 184766971 -68489612 + MER5B DNA MER1_type 78 130 -48 391 320 56 97 chr2 184767035 184767479 -68489104 + L2 LINE L2 2847 3272 0 351 325 129 12 chr2 184768030 184768519 -68488064 - L1ME4a LINE L1 -225 5896 5351 373 267 82 46 chr2 184768530 184768725 -68487858 - L1ME4a LINE L1 -848 5298 5097 21 57 0 0 chr2 184769657 184769692 -68486891 + AT_rich Low_complexity Low_complexity 1 35 0 186 43 0 0 chr2 184769901 184769924 -68486659 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr2 184770424 184770446 -68486137 + AT_rich Low_complexity Low_complexity 1 22 0 208 256 0 0 chr2 184771530 184771573 -68485010 + CT-rich Low_complexity Low_complexity 1 43 0 320 300 56 0 chr2 184771573 184771663 -68484920 - L2 LINE L2 -18 3295 3201 518 279 32 7 chr2 184771878 184772032 -68484551 + MIR SINE MIR 40 197 -65 227 363 159 0 chr2 184772140 184772253 -68484330 + L2 LINE L2 3105 3235 -37 2151 75 65 0 chr2 184772633 184772912 -68483671 + AluSp SINE Alu 1 297 -16 1433 134 27 116 chr2 184774549 184774730 -68481853 - AluYb8 SINE Alu -12 306 144 198 0 0 0 chr2 184774730 184774752 -68481831 + (T)n Simple_repeat Simple_repeat 1 22 0 1433 134 27 116 chr2 184774752 184774885 -68481698 - AluYb8 SINE Alu -174 144 1 1214 213 72 7 chr2 184775415 184775692 -68480891 + AluJo SINE Alu 1 295 -17 542 319 63 43 chr2 184776494 184776748 -68479835 + MIR SINE MIR 2 260 -2 371 171 125 0 chr2 184780061 184780149 -68476434 + Charlie4a DNA MER1_type 17 115 -393 1152 161 42 0 chr2 184780149 184780365 -68476218 + AluJb SINE Alu 85 308 0 1294 185 74 79 chr2 184780365 184780759 -68475824 + Charlie4a DNA MER1_type 104 495 -13 360 209 0 149 chr2 184780984 184781132 -68475451 - L2 LINE L2 0 3313 3188 513 0 56 0 chr2 184781150 184781222 -68475361 + (TAGA)n Simple_repeat Simple_repeat 3 78 0 898 314 40 35 chr2 184781319 184781742 -68474841 - L2 LINE L2 -354 2960 2536 362 251 165 52 chr2 184781742 184782069 -68474514 - LTR33 LTR ERVL 0 521 158 451 282 17 0 chr2 184784377 184784494 -68472089 - L2 LINE L2 0 3313 3195 211 163 35 128 chr2 184784801 184784887 -68471696 + MIR SINE MIR 174 251 -11 2585 157 62 21 chr2 184785526 184785960 -68470623 + LTR47A LTR ERVL 1 452 0 256 261 143 17 chr2 184786192 184786311 -68470272 + L2 LINE L2 3180 3313 0 592 158 0 122 chr2 184787352 184787491 -68469092 + FLAM_A SINE Alu 11 132 -10 294 303 55 9 chr2 184787502 184787611 -68468972 - L3 LINE CR1 -187 1390 1277 1905 76 8 45 chr2 184788192 184788456 -68468127 + AluSc SINE Alu 39 292 -17 2548 144 8 67 chr2 184788960 184789468 -68467115 + L1 LINE L1 3504 3981 -2165 1087 191 10 15 chr2 184789512 184789743 -68466840 + AluJb SINE Alu 87 316 0 2196 133 0 27 chr2 184789743 184790112 -68466471 + L1MA5 LINE L1 5942 6300 0 183 80 0 0 chr2 184790412 184790437 -68466146 + (T)n Simple_repeat Simple_repeat 1 25 0 685 179 13 107 chr2 184790941 184791051 -68465532 - L2 LINE L2 0 3313 3233 3166 57 0 0 chr2 184791051 184791420 -68465163 + L1PA6 LINE L1 5782 6150 -4 685 179 13 107 chr2 184791420 184791533 -68465050 - L2 LINE L2 -80 3233 3111 284 311 84 0 chr2 184791962 184792081 -68464502 - MIR SINE MIR -76 186 58 358 292 18 16 chr2 184792120 184792241 -68464342 + MIR SINE MIR 36 152 -67 420 254 62 95 chr2 184792469 184792921 -68463662 - MLT1K LTR MaLR -8 580 144 264 30 0 0 chr2 184793241 184793274 -68463309 + (TG)n Simple_repeat Simple_repeat 2 34 0 342 344 36 10 chr2 184793768 184793963 -68462620 - L3 LINE CR1 -311 1266 1067 187 245 61 0 chr2 184794128 184794177 -68462406 + L2 LINE L2 3221 3272 0 202 222 0 0 chr2 184794819 184794855 -68461728 + (TAG)n Simple_repeat Simple_repeat 1 36 0 335 251 95 60 chr2 184794864 184795082 -68461501 - MIR SINE MIR -15 247 20 206 118 0 0 chr2 184795578 184795612 -68460971 + (A)n Simple_repeat Simple_repeat 1 34 0 254 359 0 38 chr2 184795991 184796122 -68460461 + MIR SINE MIR 87 212 -50 22 0 0 0 chr2 184798773 184798795 -68457788 + AT_rich Low_complexity Low_complexity 1 22 0 1852 203 62 37 chr2 184798897 184799351 -68457232 - MLT1D LTR MaLR 0 505 41 717 122 0 0 chr2 184799354 184799452 -68457131 - MSTB LTR MaLR 0 426 329 1986 164 16 3 chr2 184799809 184800132 -68456451 - MSTB LTR MaLR -99 327 1 317 343 42 30 chr2 184800248 184800414 -68456169 + L2 LINE L2 2609 2776 -538 297 294 14 70 chr2 184800438 184800581 -68456002 - MIR SINE MIR -38 224 90 1807 169 46 27 chr2 184800611 184800983 -68455600 + MER58D DNA MER1_type 6 384 -2 14541 127 21 9 chr2 184801417 184803631 -68452952 + Tigger1 DNA MER2_type 160 2400 -18 1376 227 42 42 chr2 184803639 184804040 -68452543 + L1MA9 LINE L1 5784 6184 -128 1326 158 60 38 chr2 184804040 184804438 -68452145 + pTR5 LTR ERV1 753 1159 -1279 2256 183 14 0 chr2 184805709 184806069 -68450514 - MLT1A1 LTR MaLR 0 365 1 423 272 100 44 chr2 184806258 184806438 -68450145 - MIR SINE MIR -70 192 3 21 0 0 0 chr2 184806677 184806698 -68449885 + AT_rich Low_complexity Low_complexity 1 21 0 231 281 31 16 chr2 184806964 184807028 -68449555 + MIR SINE MIR 20 84 -124 1045 271 114 35 chr2 184807860 184808291 -68448292 + MLT1J LTR MaLR 4 468 -43 612 270 85 16 chr2 184808452 184808641 -68447942 + MIR SINE MIR 2 203 -59 2713 115 59 18 chr2 184809461 184809905 -68446678 + L1MA8 LINE L1 5823 6284 -7 504 315 24 0 chr2 184810891 184811018 -68445565 - L2 LINE L2 -2 3270 3141 2168 111 14 3 chr2 184813321 184813618 -68442965 - AluSc SINE Alu -9 300 1 541 215 51 32 chr2 184813711 184813869 -68442714 + MER103 DNA DNA 4 164 -2 23 33 0 0 chr2 184814578 184814608 -68441975 + AT_rich Low_complexity Low_complexity 1 30 0 376 138 86 60 chr2 184814744 184814860 -68441723 - L1ME4a LINE L1 -196 5925 5807 1103 150 35 71 chr2 184814894 184815033 -68441550 + AluSx SINE Alu 1 130 -182 2823 22 3 0 chr2 184815033 184815349 -68441234 + AluYb8 SINE Alu 1 317 -1 1103 150 35 71 chr2 184815349 184815435 -68441148 + AluSx SINE Alu 130 218 -94 4414 100 43 82 chr2 184815535 184816554 -68440029 + pTR5 LTR ERV1 1149 2438 0 277 268 0 36 chr2 184816558 184816670 -68439913 + L1MA9 LINE L1 6175 6282 -30 2993 120 27 14 chr2 184817615 184818057 -68438526 + MER83 LTR ERV1 1 448 0 439 280 83 12 chr2 184818560 184818728 -68437855 - MIR SINE MIR -55 207 28 339 316 26 39 chr2 184820175 184820330 -68436253 - MIR SINE MIR -45 217 65 469 221 88 0 chr2 184820523 184820636 -68435947 + MIR SINE MIR 111 233 -29 1058 175 0 74 chr2 184820828 184821017 -68435566 - FAM SINE Alu 0 175 1 362 308 25 8 chr2 184821236 184821356 -68435227 - MIR3 SINE MIR -50 158 37 2213 101 34 10 chr2 184821385 184821683 -68434900 - AluSq SINE Alu -8 305 1 332 338 46 7 chr2 184822107 184822258 -68434325 - L3 LINE CR1 -852 725 569 2024 132 20 0 chr2 184823868 184824163 -68432420 + AluJb SINE Alu 1 301 -11 258 105 0 0 chr2 184824170 184824208 -68432375 + (TG)n Simple_repeat Simple_repeat 2 39 0 200 367 13 0 chr2 184824358 184824437 -68432146 + CT-rich Low_complexity Low_complexity 5 84 0 998 257 46 59 chr2 184825081 184825520 -68431063 + LTR16A LTR ERVL 16 448 -2 1021 201 9 61 chr2 184825677 184825906 -68430677 + MER20 DNA MER1_type 2 218 -1 511 258 84 32 chr2 184826486 184826641 -68429942 + MER5B DNA MER1_type 14 176 -2 192 179 0 0 chr2 184827131 184827170 -68429413 + (TA)n Simple_repeat Simple_repeat 2 40 0 26 30 0 0 chr2 184827184 184827217 -68429366 + AT_rich Low_complexity Low_complexity 1 33 0 207 220 0 68 chr2 184829930 184829989 -68426594 + MER5A DNA MER1_type 21 75 -114 2039 130 0 0 chr2 184829991 184830275 -68426308 + AluSx SINE Alu 1 284 -28 495 0 0 0 chr2 184830275 184830330 -68426253 + (TAGA)n Simple_repeat Simple_repeat 2 56 0 204 236 127 64 chr2 184830981 184831091 -68425492 + MIR SINE MIR 31 147 -115 231 309 50 36 chr2 184831398 184831537 -68425046 + L3 LINE CR1 1430 1570 -7 1140 286 92 23 chr2 184832247 184832723 -68423860 + LTR33 LTR ERVL 13 521 0 754 288 83 4 chr2 184833580 184833809 -68422774 - MIR SINE MIR -4 258 12 4591 145 18 20 chr2 184834401 184835168 -68421415 + L1MC2 LINE L1 5579 6344 0 2207 186 36 87 chr2 184835338 184835451 -68421132 + MLT1D LTR MaLR 1 118 -387 2342 110 0 0 chr2 184835451 184835752 -68420831 + AluSx SINE Alu 1 301 -11 2207 186 36 87 chr2 184835752 184836170 -68420413 + MLT1D LTR MaLR 118 505 0 374 305 76 15 chr2 184836453 184836584 -68419999 + MIR SINE MIR 20 158 -104 1603 205 70 13 chr2 184837301 184837686 -68418897 - Charlie1b DNA MER1_type -116 407 1 183 156 0 0 chr2 184837735 184837767 -68418816 + (TG)n Simple_repeat Simple_repeat 2 33 0 554 277 22 22 chr2 184838486 184838670 -68417913 + MIR3 SINE MIR 19 202 -6 181 267 17 17 chr2 184839655 184839715 -68416868 + MER5A DNA MER1_type 7 66 -123 261 0 0 0 chr2 184840074 184840103 -68416480 + (CA)n Simple_repeat Simple_repeat 2 30 0 248 395 96 13 chr2 184840381 184840695 -68415888 + L2 LINE L2 2933 3272 0 496 346 13 21 chr2 184841388 184841625 -68414958 + L2 LINE L2 2302 2536 -778 1005 271 106 34 chr2 184841681 184841978 -68414605 - MLT1J2 LTR MaLR 0 450 176 198 0 0 0 chr2 184841978 184842000 -68414583 + (TTA)n Simple_repeat Simple_repeat 3 24 0 5077 30 7 0 chr2 184842000 184842565 -68414018 - L1PA4 LINE L1 -18 6137 5569 1005 271 106 34 chr2 184842565 184842683 -68413900 - MLT1J2 LTR MaLR -273 177 4 342 316 79 51 chr2 184842689 184842845 -68413738 + L2 LINE L2 2624 2789 -525 1678 254 78 81 chr2 184842845 184843510 -68413073 - MLT2F LTR ERVL 0 663 1 342 316 79 51 chr2 184843510 184843568 -68413015 + L2 LINE L2 2789 2844 -470 260 413 28 0 chr2 184843646 184843755 -68412828 + L2 LINE L2 3116 3227 -45 356 80 0 0 chr2 184843755 184843805 -68412778 - MADE1 DNA Mariner -30 50 1 195 329 77 28 chr2 184844209 184844352 -68412231 + L3b LINE CR1 1418 1567 -16 670 185 33 13 chr2 184844743 184844894 -68411689 - MIR SINE MIR -29 233 80 2285 100 3 3 chr2 184847627 184847938 -68408645 + AluSx SINE Alu 1 311 -1 318 271 35 0 chr2 184847948 184848033 -68408550 - MIR SINE MIR -71 191 104 279 0 0 0 chr2 184848462 184848493 -68408090 + (TG)n Simple_repeat Simple_repeat 2 32 0 3079 139 38 55 chr2 184848816 184849400 -68407183 + MER4B LTR ERV1 1 574 -36 2029 142 50 0 chr2 184850717 184851056 -68405527 + MER46B DNA MER2_type 1 231 -5 288 189 21 21 chr2 184851116 184851211 -68405372 + CT-rich Low_complexity Low_complexity 3 97 0 2351 75 0 0 chr2 184851278 184851560 -68405023 + AluSx SINE Alu 1 282 -30 398 20 20 0 chr2 184851874 184851925 -68404658 + (CA)n Simple_repeat Simple_repeat 2 53 0 1718 94 8 4 chr2 184852197 184852441 -68404142 + AluY SINE Alu 53 297 -14 244 195 0 26 chr2 184852443 184852520 -68404063 + (TA)n Simple_repeat Simple_repeat 2 76 0 1003 173 12 0 chr2 184852529 184852711 -68403872 + AluSg/x SINE Alu 127 310 0 225 0 0 0 chr2 184853809 184853834 -68402749 + (CA)n Simple_repeat Simple_repeat 1 25 0 451 241 120 108 chr2 184854323 184854564 -68402019 - MIR SINE MIR -6 256 13 535 350 91 35 chr2 184854743 184855268 -68401315 - L2 LINE L2 -2 3270 2714 646 250 57 79 chr2 184855268 184855584 -68400999 - L2 LINE L2 0 3313 3005 222 213 120 27 chr2 184857123 184857198 -68399385 + L2 LINE L2 3221 3302 -11 1601 157 3 44 chr2 184857329 184857622 -68398961 + AluJo SINE Alu 18 298 -14 359 292 123 67 chr2 184857661 184857856 -68398727 - MIR SINE MIR -44 218 13 243 244 78 119 chr2 184858638 184858831 -68397752 + L2 LINE L2 2807 2991 -322 1728 163 28 3 chr2 184858893 184859182 -68397401 - AluJb SINE Alu 0 312 17 587 249 154 113 chr2 184859237 184859750 -68396833 - MLT1L LTR MaLR -81 534 1 280 272 43 11 chr2 184860491 184860583 -68396000 + MIR SINE MIR 88 182 -80 27 0 0 0 chr2 184862020 184862047 -68394536 + AT_rich Low_complexity Low_complexity 1 27 0 305 236 171 41 chr2 184862115 184862238 -68394345 + MLT1J LTR MaLR 20 158 -353 376 196 39 10 chr2 184862362 184862464 -68394119 + MLT1J LTR MaLR 364 425 -21 542 330 60 0 chr2 184862465 184862650 -68393933 - L2 LINE L2 -904 2410 2215 1721 186 28 45 chr2 184862656 184863195 -68393388 - L1ME1 LINE L1 -12 6172 5658 905 328 86 4 chr2 184863242 184863718 -68392865 - L2 LINE L2 -1153 2161 1647 709 313 139 15 chr2 184863786 184864246 -68392337 - L2 LINE L2 -2235 1079 563 308 64 21 0 chr2 184865522 184865569 -68391014 + (TGGA)n Simple_repeat Simple_repeat 3 50 0 443 18 18 0 chr2 184865579 184865635 -68390948 + (TAGA)n Simple_repeat Simple_repeat 3 59 0 759 223 55 40 chr2 184866568 184866770 -68389813 - MIR SINE MIR -2 260 56 217 212 151 68 chr2 184866771 184866917 -68389666 - MIR SINE MIR -71 191 34 374 275 111 12 chr2 184867353 184867524 -68389059 - MER117 DNA MER1_type 0 197 10 782 217 70 0 chr2 184867678 184867835 -68388748 - MLT1A1 LTR MaLR 0 365 198 183 42 0 0 chr2 184868203 184868227 -68388356 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 1062 228 37 0 chr2 184869502 184869717 -68386866 + MER58A DNA MER1_type 1 223 -1 251 245 19 0 chr2 184869819 184869872 -68386711 - L2 LINE L2 -4 3268 3215 22 0 0 0 chr2 184870334 184870356 -68386227 + AT_rich Low_complexity Low_complexity 1 22 0 650 275 130 31 chr2 184872369 184872784 -68383799 - LTR33 LTR ERVL -65 456 1 273 29 0 0 chr2 184873662 184873696 -68382887 + (TC)n Simple_repeat Simple_repeat 2 35 0 446 281 117 20 chr2 184873979 184874175 -68382408 - MIR SINE MIR 0 262 48 1491 213 46 38 chr2 184874744 184875159 -68381424 - MER39 LTR ERV1 0 707 91 578 270 60 95 chr2 184875333 184875681 -68380902 - MER102b DNA MER1_type 0 341 6 4735 71 2 2 chr2 184876835 184877453 -68379130 + L1PA10 LINE L1 5551 6168 0 207 0 0 0 chr2 184878040 184878063 -68378520 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 373 227 145 110 chr2 184878373 184878655 -68377928 + Charlie2 DNA MER1_type 1 292 -2490 224 283 0 0 chr2 184878757 184878810 -68377773 + CT-rich Low_complexity Low_complexity 3 55 0 874 197 0 5 chr2 184878854 184879042 -68377541 + Charlie2a DNA MER1_type 1475 1661 -1201 331 172 192 10 chr2 184879075 184879174 -68377409 + Charlie2a DNA MER1_type 2739 2855 -7 1706 188 72 16 chr2 184879743 184880175 -68376408 - Charlie4a DNA MER1_type -17 491 36 344 277 202 37 chr2 184880342 184880530 -68376053 - MIR SINE MIR -42 220 2 1723 156 33 4 chr2 184880571 184880873 -68375710 - AluJb SINE Alu 0 311 2 232 292 31 0 chr2 184882032 184882097 -68374486 - L2 LINE L2 -3 3310 3244 192 340 20 60 chr2 184882315 184882415 -68374168 - MIR3 SINE MIR -106 102 7 1508 269 76 25 chr2 184882617 184883129 -68373454 - MLT1H1 LTR MaLR -1 554 17 694 288 40 14 chr2 184883625 184883847 -68372736 + MIR SINE MIR 9 236 -26 42 20 0 0 chr2 184884047 184884096 -68372487 + AT_rich Low_complexity Low_complexity 1 49 0 1436 172 64 108 chr2 184884985 184885420 -68371163 - MLT1C LTR MaLR 0 467 52 2200 81 0 27 chr2 184886416 184886734 -68369849 + AluY SINE Alu 1 310 0 2134 100 3 63 chr2 184887231 184887550 -68369033 - AluSp SINE Alu -13 300 1 196 284 128 29 chr2 184887601 184887703 -68368880 - MIR SINE MIR -70 192 81 2261 83 21 3 chr2 184888578 184888867 -68367716 - AluY SINE Alu -16 295 2 2042 101 4 4 chr2 184888868 184889144 -68367439 - AluSx SINE Alu -36 276 1 378 255 120 32 chr2 184889176 184889221 -68367362 + MER5A DNA MER1_type 1 41 -141 1813 171 0 10 chr2 184889221 184889514 -68367069 - AluJb SINE Alu -16 296 7 378 255 120 32 chr2 184889514 184889628 -68366955 + MER5A DNA MER1_type 41 167 -15 1802 179 42 3 chr2 184891976 184892329 -68364254 - MSTB1 LTR MaLR -61 371 5 1845 152 7 7 chr2 184892476 184892766 -68363817 - AluJo SINE Alu -22 290 1 21 0 0 0 chr2 184892829 184892850 -68363733 + AT_rich Low_complexity Low_complexity 1 21 0 1445 168 70 65 chr2 184893674 184894044 -68362539 - MLT1B LTR MaLR -18 372 1 980 288 8 8 chr2 184894098 184894348 -68362235 + MIR SINE MIR 13 262 0 1260 142 90 0 chr2 184894682 184894893 -68361690 + MER30 DNA MER1_type 1 230 0 674 174 0 22 chr2 184895257 184895395 -68361188 + L1MA3 LINE L1 6171 6305 0 27 0 0 0 chr2 184895395 184895422 -68361161 + AT_rich Low_complexity Low_complexity 1 27 0 878 134 49 109 chr2 184895631 184895789 -68360794 + ORSL DNA AcHobo 42 182 -93 1907 128 0 44 chr2 184895789 184896112 -68360471 + AluSx SINE Alu 1 310 0 878 134 49 109 chr2 184896112 184896199 -68360384 + ORSL DNA AcHobo 182 273 -2 229 198 22 44 chr2 184896206 184896297 -68360286 + (TTATA)n Simple_repeat Simple_repeat 3 91 0 484 295 175 20 chr2 184896759 184896978 -68359605 - MIR SINE MIR -6 256 8 1751 166 22 0 chr2 184897068 184897372 -68359211 + AluJb SINE Alu 1 310 0 1991 137 3 27 chr2 184897403 184897703 -68358880 - AluJo SINE Alu -19 293 1 268 300 75 25 chr2 184897749 184897869 -68358714 - MIR3 SINE MIR -5 203 78 21 36 0 0 chr2 184898324 184898352 -68358231 + AT_rich Low_complexity Low_complexity 1 28 0 207 0 0 0 chr2 184898486 184898509 -68358074 + (CA)n Simple_repeat Simple_repeat 2 24 0 2430 92 0 13 chr2 184898602 184898917 -68357666 + AluSp SINE Alu 1 311 -2 308 346 101 31 chr2 184899224 184899383 -68357200 - L2 LINE L2 -527 2787 2618 407 200 56 0 chr2 184899532 184899657 -68356926 + L1ME4a LINE L1 5791 5922 -199 3224 138 50 0 chr2 184900417 184900918 -68355665 - MER1A DNA MER1_type -1 526 1 889 144 0 26 chr2 184901175 184901328 -68355255 - AluY SINE Alu -161 150 2 1865 155 38 0 chr2 184901329 184901620 -68354963 - AluJb SINE Alu -10 302 1 21 0 0 0 chr2 184902156 184902177 -68354406 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 184902462 184902491 -68354092 + AT_rich Low_complexity Low_complexity 1 29 0 2269 155 31 10 chr2 184904037 184904423 -68352160 + MSTD LTR MaLR 1 394 -2 858 250 14 23 chr2 184904617 184904833 -68351750 + MIR SINE MIR 4 217 -45 249 269 90 0 chr2 184904941 184905008 -68351575 + MIR SINE MIR 78 150 -112 1957 166 0 0 chr2 184905218 184905513 -68351070 - AluJb SINE Alu -17 295 1 668 264 178 74 chr2 184905743 184906675 -68349908 + L1ME3A LINE L1 10 1038 -5081 554 200 30 45 chr2 184906720 184906920 -68349663 + L1MB4 LINE L1 5134 5330 -816 503 191 0 0 chr2 184906921 184907010 -68349573 + AluJb SINE Alu 207 295 -17 404 142 37 20 chr2 184907016 184907133 -68349450 + L1MB4 LINE L1 5322 5389 -791 3163 174 53 45 chr2 184907150 184907365 -68349218 + L1MB4 LINE L1 5389 5601 -579 2376 87 3 0 chr2 184907365 184907664 -68348919 + AluSp SINE Alu 1 300 -13 3163 174 53 45 chr2 184907664 184908228 -68348355 + L1MB4 LINE L1 5601 6174 -6 356 195 0 0 chr2 184908247 184908329 -68348254 + L1MB8 LINE L1 6093 6174 -4 480 230 178 66 chr2 184908342 184908690 -68347893 - MLT1J2 LTR MaLR 0 450 64 649 254 93 31 chr2 184908738 184909215 -68347368 + L1ME3A LINE L1 1119 1654 -4656 381 259 86 61 chr2 184909653 184910081 -68346502 + L1ME3A LINE L1 2202 2640 -3489 1502 146 121 14 chr2 184910118 184910398 -68346185 - AluSg SINE Alu 0 310 1 240 104 82 22 chr2 184910487 184910622 -68345961 + (TA)n Simple_repeat Simple_repeat 1 143 0 2308 259 83 42 chr2 184910661 184911662 -68344921 + L1ME3A LINE L1 2756 3854 -2275 213 94 0 0 chr2 184911662 184911694 -68344889 + (CA)n Simple_repeat Simple_repeat 2 33 0 2308 259 83 42 chr2 184911694 184912373 -68344210 + L1ME3A LINE L1 3854 4504 -1625 721 283 82 14 chr2 184912413 184912911 -68343672 + L1ME3A LINE L1 4780 5311 -818 1398 276 48 18 chr2 184912922 184913487 -68343096 + L1ME3A LINE L1 5359 5940 -213 996 133 20 27 chr2 184914053 184914298 -68342285 - MER33 DNA MER1_type 0 324 1 996 169 33 5 chr2 184915533 184915717 -68340866 - MER5A DNA MER1_type 0 189 1 21 57 0 0 chr2 184915770 184915805 -68340778 + AT_rich Low_complexity Low_complexity 1 35 0 756 157 38 76 chr2 184915895 184916003 -68340580 + MER33 DNA MER1_type 19 117 -2468 1788 177 0 3 chr2 184916003 184916302 -68340281 + AluJo SINE Alu 5 302 -10 756 157 38 76 chr2 184916302 184916403 -68340180 + MER33 DNA MER1_type 117 220 -104 1835 146 14 3 chr2 184916414 184916702 -68339881 - AluJb SINE Alu -21 291 1 2023 102 4 4 chr2 184916719 184916993 -68339590 + AluSp SINE Alu 37 310 -3 956 196 56 0 chr2 184917047 184917226 -68339357 + MER5A DNA MER1_type 1 189 0 391 234 255 7 chr2 184917232 184917377 -68339206 - MER5A DNA MER1_type 0 189 9 202 150 25 0 chr2 184917835 184917875 -68338708 + A-rich Low_complexity Low_complexity 5 45 0 316 256 12 23 chr2 184919067 184919153 -68337430 + MIR SINE MIR 47 131 -131 516 196 21 0 chr2 184920103 184920200 -68336383 - MER5A DNA MER1_type -84 105 7 277 274 32 0 chr2 184920255 184920317 -68336266 + L2 LINE L2 3242 3305 -8 1192 141 0 31 chr2 184920521 184920712 -68335871 - AluJo SINE Alu -23 289 105 22 35 0 0 chr2 184920716 184920745 -68335838 + AT_rich Low_complexity Low_complexity 1 29 0 245 260 27 92 chr2 184920964 184921160 -68335423 - MER5A DNA MER1_type -31 158 1 556 193 180 0 chr2 184922784 184922934 -68333649 - MER3 DNA MER1_type -78 131 2 1665 160 0 35 chr2 184923223 184923510 -68333073 + AluJb SINE Alu 6 282 -30 408 299 39 20 chr2 184923939 184924143 -68332440 + MLT1I LTR MaLR 1 208 -201 544 170 0 75 chr2 184924377 184924483 -68332100 - AluJo SINE Alu -185 127 30 1455 145 52 4 chr2 184924578 184924827 -68331756 + AluJb SINE Alu 1 261 -51 593 217 164 20 chr2 184925653 184925805 -68330778 - MER5B DNA MER1_type -3 175 2 308 360 91 62 chr2 184925858 184926311 -68330272 - L2 LINE L2 0 3272 2807 748 307 52 4 chr2 184926668 184926899 -68329684 + MIR SINE MIR 4 245 -17 344 247 187 33 chr2 184926932 184927082 -68329501 + MER5A DNA MER1_type 17 189 0 383 171 38 194 chr2 184927173 184927384 -68329199 - MER5B DNA MER1_type 0 178 1 1258 310 31 5 chr2 184928169 184928556 -68328027 - L2 LINE L2 -544 2770 2374 919 198 0 6 chr2 184928922 184929094 -68327489 + AluJb SINE Alu 141 311 -1 277 229 66 0 chr2 184929111 184929172 -68327411 + L2 LINE L2 3201 3265 -7 907 232 79 21 chr2 184929184 184929425 -68327158 - MIR SINE MIR -5 257 3 2353 82 7 0 chr2 184929904 184930195 -68326388 - AluSx SINE Alu -19 293 1 422 341 72 0 chr2 184930267 184930560 -68326023 - L1ME LINE L1 -380 5790 5477 340 349 6 12 chr2 184930706 184930872 -68325711 - L1ME LINE L1 -804 5342 5178 31 0 0 0 chr2 184931179 184931210 -68325373 + AT_rich Low_complexity Low_complexity 1 31 0 1964 99 3 42 chr2 184931664 184931947 -68324636 + AluSq SINE Alu 39 310 -3 423 196 21 0 chr2 184932060 184932157 -68324426 - MLT1J1 LTR MaLR -2 444 346 636 184 5 111 chr2 184932209 184932314 -68324269 - MLT1J2 LTR MaLR -249 201 123 1709 111 158 0 chr2 184932314 184932567 -68324016 + AluSg SINE Alu 3 295 -15 636 184 5 111 chr2 184932567 184932651 -68323932 - MLT1J2 LTR MaLR -327 123 32 1679 193 36 9 chr2 184932724 184933056 -68323527 + MER58B DNA MER1_type 1 341 0 294 257 24 89 chr2 184934007 184934194 -68322389 - MIR SINE MIR -15 193 20 833 48 0 0 chr2 184934199 184934303 -68322280 + MER30 DNA MER1_type 2 105 -125 325 68 120 0 chr2 184934303 184934420 -68322163 + (TA)n Simple_repeat Simple_repeat 2 132 0 27 0 0 0 chr2 184934465 184934492 -68322091 + AT_rich Low_complexity Low_complexity 1 27 0 432 162 14 0 chr2 184934498 184934572 -68322011 + MER30 DNA MER1_type 151 225 -5 22 0 0 0 chr2 184935316 184935338 -68321245 + AT_rich Low_complexity Low_complexity 1 22 0 460 196 157 0 chr2 184935504 184935606 -68320977 + 5S rRNA rRNA 4 121 0 24 0 0 0 chr2 184936082 184936106 -68320477 + AT_rich Low_complexity Low_complexity 1 24 0 369 249 103 63 chr2 184936247 184936625 -68319958 + L1ME4a LINE L1 5672 6064 -57 229 258 103 0 chr2 184937303 184937400 -68319183 + L1ME4a LINE L1 5985 6091 -30 237 226 48 60 chr2 184938333 184938417 -68318166 + L2 LINE L2 3229 3311 -2 294 297 203 7 chr2 184938488 184938636 -68317947 + L3b LINE CR1 1106 1282 -301 247 154 0 0 chr2 184939319 184939358 -68317225 - MER57A LTR ERV1 -70 333 295 224 157 20 0 chr2 184939395 184939446 -68317137 + (TTATA)n Simple_repeat Simple_repeat 3 54 0 2023 121 14 3 chr2 184941125 184941414 -68315169 + AluSg SINE Alu 1 292 -18 2281 86 7 3 chr2 184941525 184941826 -68314757 - AluSp SINE Alu -11 302 1 327 49 0 0 chr2 184942571 184942612 -68313971 + (CA)n Simple_repeat Simple_repeat 2 42 0 21 57 0 0 chr2 184943499 184943534 -68313049 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 184946033 184946054 -68310529 + AT_rich Low_complexity Low_complexity 1 21 0 626 319 10 29 chr2 184946841 184947048 -68309535 - MIR SINE MIR -59 203 1 618 247 48 17 chr2 184947636 184947867 -68308716 + L1ME3A LINE L1 5705 5942 -228 492 312 23 12 chr2 184948061 184948234 -68308349 + MIR SINE MIR 12 186 -76 235 356 82 14 chr2 184948551 184948759 -68307824 + L2 LINE L2 2546 2767 -547 621 237 50 61 chr2 184949408 184949606 -68306977 + MIR SINE MIR 42 237 -25 2253 103 0 7 chr2 184949741 184950041 -68306542 + AluSx SINE Alu 1 298 -14 519 55 0 0 chr2 184951308 184951381 -68305202 + MER41B LTR ERV1 477 549 -86 1558 170 46 42 chr2 184951710 184952016 -68304567 - AluJb SINE Alu -1 311 5 2013 142 16 10 chr2 184952065 184952375 -68304208 + AluSq SINE Alu 1 312 -1 1853 154 20 17 chr2 184952859 184953157 -68303426 - AluJo SINE Alu -1 311 13 688 146 73 8 chr2 184953189 184953312 -68303271 - FLAM_C SINE Alu -12 131 1 2237 101 3 0 chr2 184953631 184953929 -68302654 + AluSx SINE Alu 1 299 -13 2322 95 0 0 chr2 184953967 184954263 -68302320 + AluSg SINE Alu 1 296 -14 2076 141 0 0 chr2 184954476 184954792 -68301791 + AluJo SINE Alu 1 312 0 31 26 0 0 chr2 184956276 184956314 -68300269 + AT_rich Low_complexity Low_complexity 1 38 0 2367 105 0 6 chr2 184956602 184956916 -68299667 - AluSq SINE Alu -1 312 1 1272 112 0 17 chr2 184957781 184957960 -68298623 - AluSg/x SINE Alu -17 293 118 24 0 0 0 chr2 184958594 184958618 -68297965 + AT_rich Low_complexity Low_complexity 1 24 0 2588 33 0 3 chr2 184963916 184964222 -68292361 + AluY SINE Alu 1 305 -6 279 314 110 8 chr2 184964487 184964605 -68291978 - L2 LINE L2 -1404 1910 1781 365 194 0 0 chr2 184965037 184965109 -68291474 - MLT1J LTR MaLR -4 507 436 637 278 105 34 chr2 184965110 184965415 -68291168 + MLT1I LTR MaLR 6 337 -72 2168 107 35 0 chr2 184965415 184965704 -68290879 + AluSg SINE Alu 2 300 -10 637 278 105 34 chr2 184965704 184965722 -68290861 + MLT1I LTR MaLR 337 352 -57 427 260 192 34 chr2 184965729 184966052 -68290531 - MLT1J LTR MaLR -77 434 61 521 136 34 42 chr2 184967754 184967845 -68288738 + MLT1A2 LTR MaLR 1 90 -284 240 105 0 0 chr2 184967845 184967883 -68288700 + LTR54 LTR ERV1 1 38 -472 910 133 137 44 chr2 184968427 184968675 -68287908 + LTR54B LTR ERV1 40 310 -188 704 186 0 0 chr2 184968692 184968810 -68287773 + AluJb SINE Alu 1 118 -194 23 54 0 0 chr2 184968810 184968847 -68287736 + AT_rich Low_complexity Low_complexity 1 37 0 623 190 89 0 chr2 184968850 184969008 -68287575 + LTR54B LTR ERV1 325 496 -2 * 1170 191 3 62 chr2 184969008 184969308 -68287275 + MLT1A2 LTR MaLR 93 374 0 23 0 0 0 chr2 184970006 184970029 -68286554 + AT_rich Low_complexity Low_complexity 1 23 0 2233 93 3 42 chr2 184970182 184970492 -68286091 + AluSx SINE Alu 1 298 -14 397 191 124 0 chr2 184970607 184970696 -68285887 + MER63 DNA MER1_type 9 734 -328 300 260 0 14 chr2 184971168 184971241 -68285342 + CT-rich Low_complexity Low_complexity 2 73 0 186 71 0 0 chr2 184971687 184971715 -68284868 + (TTTTTG)n Simple_repeat Simple_repeat 4 31 0 396 0 0 0 chr2 184971911 184971955 -68284628 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 2357 85 0 7 chr2 184972018 184972312 -68284271 + AluSq SINE Alu 1 292 -21 489 260 148 18 chr2 184972818 184972987 -68283596 - MIR SINE MIR -28 234 44 190 339 15 0 chr2 184973205 184973270 -68283313 - L2 LINE L2 0 3272 3207 946 189 0 6 chr2 184973425 184973589 -68282994 + AluSg/x SINE Alu 132 294 -16 288 310 69 9 chr2 184973705 184973821 -68282762 - MIR SINE MIR -118 144 22 2278 88 14 0 chr2 184974054 184974339 -68282244 + AluSc SINE Alu 1 289 -20 1011 161 0 0 chr2 184974347 184974527 -68282056 + (TA)n Simple_repeat Simple_repeat 1 180 0 595 59 59 24 chr2 184975392 184975561 -68281022 + (TA)n Simple_repeat Simple_repeat 1 175 0 22 0 0 0 chr2 184975565 184975587 -68280996 + AT_rich Low_complexity Low_complexity 1 22 0 384 255 35 64 chr2 184975593 184975734 -68280849 + L1MC4 LINE L1 6614 6750 -1292 297 0 0 0 chr2 184976034 184976067 -68280516 + (CA)n Simple_repeat Simple_repeat 2 34 0 2310 183 9 13 chr2 184976132 184976585 -68279998 - MER49 LTR ERV1 0 923 473 1387 185 20 20 chr2 184976586 184976840 -68279743 + AluJb SINE Alu 20 273 -39 2406 24 0 0 chr2 184976843 184977141 -68279442 - L1P LINE L1 -977 5169 4872 197 184 26 0 chr2 184977241 184977279 -68279304 - L3 LINE CR1 -1141 436 398 356 262 0 66 chr2 184977653 184977775 -68278808 + L2 LINE L2 3199 3312 -1 626 182 52 163 chr2 184977942 184978057 -68278526 - MLT1K LTR MaLR 0 588 462 1925 177 0 0 chr2 184978057 184978362 -68278221 + AluJb SINE Alu 1 305 -7 626 182 52 163 chr2 184978362 184978686 -68277897 - MLT1K LTR MaLR -126 462 166 2252 97 3 16 chr2 184979026 184979335 -68277248 + AluY SINE Alu 1 305 -6 24 0 0 0 chr2 184979779 184979803 -68276780 + AT_rich Low_complexity Low_complexity 1 24 0 1464 216 0 3 chr2 184981596 184981911 -68274672 - AluJb SINE Alu 0 314 1 22 35 0 0 chr2 184981969 184981998 -68274585 + AT_rich Low_complexity Low_complexity 1 29 0 2401 88 0 0 chr2 184982347 184982644 -68273939 - AluY SINE Alu -14 297 1 1519 184 63 0 chr2 184982712 184982983 -68273600 - AluJb SINE Alu -24 288 1 2540 95 83 0 chr2 184983014 184983350 -68273233 - THE1B LTR MaLR 0 364 1 2191 129 0 3 chr2 184983419 184983730 -68272853 + AluSx SINE Alu 1 310 -2 230 219 0 0 chr2 184985493 184985534 -68271049 - MER115 DNA AcHobo -12 681 641 2187 119 0 0 chr2 184986117 184986410 -68270173 + AluSg1 SINE Alu 1 293 -16 2405 83 3 0 chr2 184986766 184987067 -68269516 - AluSp SINE Alu -11 302 1 2538 61 0 0 chr2 184987122 184987417 -68269166 - AluY SINE Alu -16 295 1 2101 135 0 3 chr2 184987419 184987722 -68268861 - AluSx SINE Alu -10 302 1 926 154 41 30 chr2 184987922 184988091 -68268492 + FRAM SINE Alu 1 171 -5 1589 152 19 0 chr2 184988109 184988372 -68268211 + L1MA6 LINE L1 6013 6280 -20 265 91 0 0 chr2 184988493 184988526 -68268057 + Alu SINE Alu 252 284 -17 639 128 21 0 chr2 184989688 184989782 -68266801 + AluS SINE Alu 4 99 -214 1966 148 0 16 chr2 184990338 184990643 -68265940 - AluSx SINE Alu -12 300 1 926 154 41 30 chr2 184990843 184991012 -68265571 + FRAM SINE Alu 1 171 -5 1685 156 18 0 chr2 184991030 184991312 -68265271 + L1MA6 LINE L1 6013 6299 -1 376 247 177 21 chr2 184991371 184991557 -68265026 + MIR SINE MIR 31 245 -17 2398 72 3 7 chr2 184991587 184991892 -68264691 - AluY SINE Alu -7 304 1 973 55 0 0 chr2 184991892 184992002 -68264581 - AluSg SINE Alu -176 134 25 315 0 0 0 chr2 184992002 184992037 -68264546 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2117 106 0 3 chr2 184992040 184992322 -68264261 - AluSq SINE Alu -32 281 1 266 235 15 29 chr2 184993362 184993430 -68263153 + MIR3 SINE MIR 140 206 -2 372 308 39 23 chr2 184993800 184993930 -68262653 + MIR3 SINE MIR 62 193 -15 202 185 19 37 chr2 184994387 184994441 -68262142 + CT-rich Low_complexity Low_complexity 3 55 0 788 125 0 0 chr2 184994791 184994903 -68261680 + HY1 scRNA scRNA 1 112 0 2156 122 3 0 chr2 184995484 184995771 -68260812 + AluSx SINE Alu 1 288 -24 21 0 0 0 chr2 184996146 184996167 -68260416 + AT_rich Low_complexity Low_complexity 1 21 0 1691 153 7 18 chr2 184996307 184996416 -68260167 + AluSx SINE Alu 26 135 -177 2110 139 3 3 chr2 184996416 184996725 -68259858 + AluSg SINE Alu 2 310 0 1691 153 7 18 chr2 184996725 184996890 -68259693 + AluSx SINE Alu 135 297 -15 2318 95 0 40 chr2 184997177 184997312 -68259271 + AluSx SINE Alu 1 140 -172 2203 115 0 0 chr2 184997312 184997599 -68258984 + AluSx SINE Alu 1 287 -25 2318 95 0 40 chr2 184997599 184997788 -68258795 + AluSx SINE Alu 140 312 0 2380 92 0 0 chr2 184998542 184998837 -68257746 - AluSg SINE Alu -15 295 1 449 299 109 0 chr2 184999114 184999261 -68257322 - MIR SINE MIR -94 168 6 2433 89 0 3 chr2 184999689 185000002 -68256581 - AluSx SINE Alu 0 312 1 323 218 39 26 chr2 185000030 185000108 -68256475 + MLT1J LTR MaLR 420 498 -13 268 260 39 26 chr2 185000146 185000223 -68256360 + MLT1J LTR MaLR 420 497 -14 255 280 40 13 chr2 185000262 185000337 -68256246 + MLT1J LTR MaLR 420 496 -15 2010 136 0 0 chr2 185000369 185000649 -68255934 - AluJb SINE Alu -32 280 1 1690 159 0 66 chr2 185000820 185001154 -68255429 + AluJo SINE Alu 1 312 0 3344 134 5 71 chr2 185001417 185001978 -68254605 - MER1A DNA MER1_type 0 527 4 997 216 40 0 chr2 185002037 185002259 -68254324 + L1MB4 LINE L1 5943 6173 -7 1934 152 0 3 chr2 185002477 185002774 -68253809 + AluSx SINE Alu 1 296 -16 2405 89 0 3 chr2 185002775 185003089 -68253494 + AluSq SINE Alu 1 313 0 2231 106 0 0 chr2 185003709 185004023 -68252560 - AluSx SINE Alu 0 314 1 299 250 96 68 chr2 185004951 185005218 -68251365 + L1MC5 LINE L1 6855 7113 -859 387 0 0 0 chr2 185005218 185005261 -68251322 + (TG)n Simple_repeat Simple_repeat 2 44 0 299 250 96 68 chr2 185005261 185005761 -68250822 + L1MC5 LINE L1 7113 7493 -479 768 132 0 9 chr2 185005765 185005879 -68250704 - MER39 LTR ERV1 -13 694 582 432 0 0 0 chr2 185006031 185006079 -68250504 + (TG)n Simple_repeat Simple_repeat 2 49 0 2290 99 0 7 chr2 185006425 185006729 -68249854 + AluSq SINE Alu 1 302 -11 1170 129 11 6 chr2 185006730 185006908 -68249675 + AluSg/x SINE Alu 125 303 -9 1008 195 12 0 chr2 185007202 185007371 -68249212 + MER45A DNA AcHobo 5 175 -3 2011 131 73 25 chr2 185007371 185007729 -68248854 - THE1C LTR MaLR 0 375 1 310 229 29 29 chr2 185008138 185008208 -68248375 + L2 LINE L2 3201 3270 -2 2272 75 0 4 chr2 185008527 185008806 -68247777 + AluSc SINE Alu 16 293 -16 2084 134 0 7 chr2 185008822 185009127 -68247456 + AluSx SINE Alu 1 303 -9 1144 124 0 6 chr2 185009127 185009288 -68247295 + AluSg/x SINE Alu 132 291 -18 2293 102 3 0 chr2 185009773 185010076 -68246507 - AluSx SINE Alu -8 304 1 2039 39 0 35 chr2 185010076 185010329 -68246254 - AluY SINE Alu -66 245 1 2107 128 0 19 chr2 185010329 185010641 -68245942 - AluSx SINE Alu -6 306 1 2558 50 0 0 chr2 185014304 185014607 -68241976 + AluY SINE Alu 1 303 -8 2109 110 27 3 chr2 185014888 185015180 -68241403 - AluSq SINE Alu -9 304 6 289 226 155 0 chr2 185016087 185016171 -68240412 - L1ME3A LINE L1 -54 6116 6020 261 268 0 12 chr2 185016659 185016741 -68239842 + (TGG)n Simple_repeat Simple_repeat 1 81 0 1117 232 32 0 chr2 185017169 185017419 -68239164 + AluJo SINE Alu 25 282 -30 2401 93 0 3 chr2 185017842 185018154 -68238429 - AluY SINE Alu 0 311 1 1373 174 110 0 chr2 185022318 185022582 -68234001 + AluJo SINE Alu 1 293 -19 24 53 0 0 chr2 185023097 185023135 -68233448 + AT_rich Low_complexity Low_complexity 1 38 0 2290 89 0 3 chr2 185024438 185024730 -68231853 + AluY SINE Alu 1 291 -20 2376 81 7 0 chr2 185025434 185025731 -68230852 + AluY SINE Alu 1 299 -12 350 189 250 8 chr2 185026169 185026301 -68230282 - Charlie4 DNA MER1_type -1797 164 1 2330 70 24 0 chr2 185026583 185026881 -68229702 - AluY SINE Alu -6 305 1 1834 133 9 70 chr2 185027630 185027946 -68228637 + AluSx SINE Alu 1 297 -15 182 277 0 0 chr2 185028090 185028137 -68228446 - MIR SINE MIR -3 259 213 977 50 0 0 chr2 185028198 185028317 -68228266 + AluY SINE Alu 183 301 -10 578 261 261 3 chr2 185028576 185028883 -68227700 + L2 LINE L2 2306 2691 -623 197 296 313 14 chr2 185029498 185029859 -68226724 + L2 LINE L2 2845 3313 0 24 32 0 0 chr2 185029977 185030008 -68226575 + AT_rich Low_complexity Low_complexity 1 31 0 622 236 85 20 chr2 185033282 185033481 -68223102 + MIR SINE MIR 36 247 -15 219 346 96 10 chr2 185033652 185033756 -68222827 - MIR SINE MIR -75 133 21 2289 77 0 24 chr2 185034631 185034928 -68221655 + AluSx SINE Alu 12 301 -11 1734 140 0 38 chr2 185034936 185035254 -68221329 + AluJo SINE Alu 1 307 0 1418 189 40 11 chr2 185035340 185035615 -68220968 + AluJo SINE Alu 1 283 -29 542 279 146 13 chr2 185036245 185036471 -68220112 - MIR SINE MIR -6 256 1 766 148 0 23 chr2 185036471 185036599 -68219984 + MER2 DNA MER2_type 82 206 -139 1763 150 30 0 chr2 185036674 185036941 -68219642 - AluJo SINE Alu -26 286 12 2389 93 0 0 chr2 185037311 185037611 -68218972 - AluSx SINE Alu -12 300 1 2180 117 0 0 chr2 185039187 185039477 -68217106 + AluJb SINE Alu 1 290 -22 189 0 0 0 chr2 185039512 185039533 -68217050 + (CAAAA)n Simple_repeat Simple_repeat 1 21 0 21 0 0 0 chr2 185039740 185039761 -68216822 + AT_rich Low_complexity Low_complexity 1 21 0 1505 171 20 4 chr2 185041368 185041620 -68214963 + AluJb SINE Alu 1 256 -56 214 29 57 0 chr2 185041627 185041662 -68214921 + (CAAAAA)n Simple_repeat Simple_repeat 3 39 0 1503 174 57 21 chr2 185043315 185043597 -68212986 - AluJo SINE Alu -20 292 1 2322 81 0 10 chr2 185043812 185044109 -68212474 + AluY SINE Alu 2 295 -16 182 273 91 0 chr2 185044223 185044267 -68212316 - L2 LINE L2 -56 3216 3169 2389 73 10 0 chr2 185044517 185044819 -68211764 + AluY SINE Alu 1 305 -6 374 315 28 0 chr2 185045029 185045137 -68211446 - MIR3 SINE MIR -11 197 87 406 304 16 76 chr2 185045347 185045408 -68211175 - MIR SINE MIR -63 199 136 2347 102 0 0 chr2 185045408 185045702 -68210881 - AluSx SINE Alu -18 294 1 406 304 16 76 chr2 185045702 185045824 -68210759 - MIR SINE MIR -126 136 27 931 228 111 96 chr2 185046328 185046386 -68210197 - L1MC4a LINE L1 -1931 5877 5821 1853 136 46 40 chr2 185046386 185046688 -68209895 - AluJo SINE Alu -6 306 3 931 228 111 96 chr2 185046688 185047006 -68209577 - L1MC4a LINE L1 -1987 5821 5495 2182 84 6 69 chr2 185047172 185047505 -68209078 + AluSq SINE Alu 1 312 -1 262 255 41 41 chr2 185047868 185047966 -68208617 - MIR3 SINE MIR -23 185 88 2285 91 3 0 chr2 185048205 185048501 -68208082 - AluSp SINE Alu -16 297 1 1457 179 14 14 chr2 185048730 185049042 -68207541 + AluJb SINE Alu 4 315 0 339 261 45 45 chr2 185049170 185049281 -68207302 + MIR3 SINE MIR 95 205 -3 771 114 80 40 chr2 185049336 185049512 -68207071 - Charlie5 DNA MER1_type 0 2624 2442 711 183 57 23 chr2 185049520 185049695 -68206888 - Charlie5 DNA MER1_type -2383 229 49 456 301 48 48 chr2 185050269 185050518 -68206065 - MIR SINE MIR -1 261 13 2404 58 17 3 chr2 185051517 185051810 -68204773 + AluY SINE Alu 2 298 -13 316 229 60 0 chr2 185051986 185052069 -68204514 + MIR SINE MIR 98 185 -77 193 352 28 0 chr2 185052957 185053028 -68203555 + L2 LINE L2 3011 3083 -230 188 274 133 71 chr2 185053115 185053228 -68203355 - L2 LINE L2 -14 3258 3139 263 317 17 0 chr2 185054552 185054659 -68201924 + MIR SINE MIR 6 116 -92 1647 210 0 3 chr2 185055354 185055654 -68200929 - AluJo SINE Alu -13 299 1 192 77 0 0 chr2 185056293 185056319 -68200264 + (A)n Simple_repeat Simple_repeat 1 26 0 2015 155 40 3 chr2 185057436 185057758 -68198825 + MER1B DNA MER1_type 4 337 0 836 201 53 0 chr2 185057766 185057935 -68198648 - MER5B DNA MER1_type 0 178 1 2019 155 40 73 chr2 185057958 185058410 -68198173 + L1MB8 LINE L1 5725 6161 -17 2015 127 28 0 chr2 185058820 185059104 -68197479 + AluSx SINE Alu 1 292 -20 2427 69 0 0 chr2 185059443 185059734 -68196849 + AluY SINE Alu 1 291 -20 2279 85 16 16 chr2 185060686 185060992 -68195591 + AluSx SINE Alu 6 311 -1 220 252 122 32 chr2 185061272 185061395 -68195188 + MIR SINE MIR 1 134 -128 258 289 172 16 chr2 185061423 185061551 -68195032 + MIR SINE MIR 114 261 -1 317 304 50 94 chr2 185063276 185063678 -68192905 + L1M2 LINE L1 635 1018 -5831 243 103 0 0 chr2 185064437 185064476 -68192107 + (CGG)n Simple_repeat Simple_repeat 2 40 0 2298 76 0 7 chr2 185066916 185067205 -68189378 + AluSc SINE Alu 1 287 -22 569 232 108 107 chr2 185067477 185068016 -68188567 + MLT1H1 LTR MaLR 18 555 0 2270 98 26 0 chr2 185068461 185068766 -68187817 + AluSp SINE Alu 1 313 0 369 211 106 67 chr2 185069006 185069153 -68187430 + L1ME4a LINE L1 5935 6092 -29 1936 156 0 3 chr2 185069153 185069448 -68187135 - AluJo SINE Alu -18 294 1 369 211 106 67 chr2 185069448 185069480 -68187103 + L1ME4a LINE L1 6092 6121 0 629 268 16 16 chr2 185070218 185070401 -68186182 + MER117 DNA MER1_type 1 183 -14 357 310 78 8 chr2 185070411 185070540 -68186043 - MIR3 SINE MIR -48 160 23 2211 92 7 3 chr2 185070565 185070857 -68185726 - AluSx SINE Alu -19 293 1 545 261 92 11 chr2 185071804 185071988 -68184595 - MIR SINE MIR 0 262 64 331 171 0 0 chr2 185072367 185072437 -68184146 - L1MA10 LINE L1 -7 6327 6258 302 175 0 0 chr2 185072448 185072505 -68184078 - L1M4 LINE L1 -736 5438 5382 26 0 0 0 chr2 185072953 185072979 -68183604 + AT_rich Low_complexity Low_complexity 1 26 0 212 267 282 41 chr2 185073259 185073454 -68183129 - MIR SINE MIR -14 248 7 29 28 0 0 chr2 185074066 185074102 -68182481 + AT_rich Low_complexity Low_complexity 1 36 0 256 236 255 0 chr2 185074518 185074624 -68181959 + MIR SINE MIR 75 207 -55 22 35 0 0 chr2 185075148 185075177 -68181406 + AT_rich Low_complexity Low_complexity 1 29 0 27 0 0 0 chr2 185075292 185075319 -68181264 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr2 185075947 185075968 -68180615 + AT_rich Low_complexity Low_complexity 1 21 0 420 177 33 44 chr2 185076033 185076214 -68180369 + (TA)n Simple_repeat Simple_repeat 2 180 0 287 266 89 24 chr2 185076214 185076338 -68180245 - L1MC4a LINE L1 -1841 5967 5836 2335 82 3 3 chr2 185076379 185076683 -68179900 - AluSg SINE Alu -6 304 1 607 231 23 0 chr2 185076694 185076824 -68179759 - L1MC4a LINE L1 -1988 5820 5688 2136 127 3 0 chr2 185076852 185077151 -68179432 - AluSx SINE Alu -12 300 1 521 135 10 29 chr2 185077173 185077277 -68179306 - L1MA7 LINE L1 0 6291 6190 340 312 58 0 chr2 185077283 185077421 -68179162 - L1MC4a LINE L1 -2124 5684 5539 1370 283 91 54 chr2 185077468 185078821 -68177762 - L1MC4a LINE L1 -818 5328 3932 703 250 74 34 chr2 185078850 185079026 -68177557 - LTR33 LTR ERVL -323 198 16 1891 145 0 20 chr2 185079201 185079541 -68177042 - AluSx SINE Alu 0 312 1 1016 112 47 18 chr2 185080043 185080212 -68176371 - MER53 DNA DNA -4 185 12 2409 85 0 7 chr2 185080676 185080983 -68175600 - AluSg SINE Alu -4 306 2 657 211 9 0 chr2 185081733 185081842 -68174741 - MER81 DNA DNA -3 111 2 303 287 11 11 chr2 185081869 185081956 -68174627 + MIR3 SINE MIR 114 200 -8 212 327 0 0 chr2 185082484 185082536 -68174047 + MIR SINE MIR 50 101 -161 299 316 68 0 chr2 185082618 185082735 -68173848 + MIR SINE MIR 103 227 -35 365 288 55 41 chr2 185085539 185085607 -68170976 + MIR SINE MIR 3 69 -193 6336 128 14 14 chr2 185085607 185086530 -68170053 + MER49 LTR ERV1 1 923 0 365 288 55 41 chr2 185086530 185086652 -68169931 + MIR SINE MIR 69 203 -59 728 270 133 14 chr2 185086758 185087043 -68169540 + MLT1J2 LTR MaLR 1 319 -131 713 152 0 0 chr2 185088155 185088260 -68168323 + FLAM_C SINE Alu 6 110 -33 2053 128 3 0 chr2 185088346 185088657 -68167926 - AluSx SINE Alu 0 312 1 185 250 131 24 chr2 185088765 185088849 -68167734 - L3 LINE CR1 -920 657 565 520 160 64 40 chr2 185089341 185089466 -68167117 + MER5B DNA MER1_type 38 165 -13 413 164 0 0 chr2 185089467 185089528 -68167055 - MER5A DNA MER1_type 0 189 129 1378 167 0 9 chr2 185089529 185089751 -68166832 + AluJo SINE Alu 1 220 -92 814 163 7 0 chr2 185089790 185089925 -68166658 - MER5A DNA MER1_type -53 136 1 200 207 52 0 chr2 185090062 185090120 -68166463 + MIR SINE MIR 131 191 -71 2195 131 0 0 chr2 185090297 185090594 -68165989 - AluSx SINE Alu -15 297 1 21 0 0 0 chr2 185090639 185090660 -68165923 + AT_rich Low_complexity Low_complexity 1 21 0 441 289 123 75 chr2 185090660 185090755 -68165828 - L1MC4a LINE L1 -1905 5903 5814 2400 90 0 6 chr2 185090755 185091067 -68165516 - AluSx SINE Alu -2 310 1 441 289 123 75 chr2 185091067 185091289 -68165294 - L1MC4a LINE L1 -1994 5814 5571 906 242 23 9 chr2 185091316 185091531 -68165052 + MIR SINE MIR 19 236 -26 320 185 49 74 chr2 185092127 185092208 -68164375 - MIR SINE MIR -5 257 179 685 267 99 0 chr2 185092252 185092443 -68164140 - MIR SINE MIR -33 229 20 340 122 14 27 chr2 185092533 185092607 -68163976 + (TCTA)n Simple_repeat Simple_repeat 4 76 0 1580 158 78 7 chr2 185093222 185093506 -68163077 + AluJo SINE Alu 1 304 -8 2240 189 31 22 chr2 185093702 185094156 -68162427 + MLT1C LTR MaLR 1 458 -9 2555 63 0 0 chr2 185094830 185095133 -68161450 + AluY SINE Alu 1 303 -8 228 310 172 9 chr2 185096208 185096324 -68160259 - L2 LINE L2 -23 3249 3115 769 161 35 21 chr2 185096339 185096482 -68160101 + FAM SINE Alu 1 45 -4 3013 134 121 101 chr2 185096585 185096660 -68159923 + MER39 LTR ERV1 1 73 -634 2022 148 10 0 chr2 185096660 185096964 -68159619 - AluSx SINE Alu -5 307 1 3013 134 121 101 chr2 185096964 185097581 -68159002 + MER39 LTR ERV1 73 707 0 283 165 71 71 chr2 185097591 185097676 -68158907 + L2 LINE L2 3224 3308 -5 2126 96 7 0 chr2 185097713 185098055 -68158528 - AluY SINE Alu 0 344 1 1963 113 25 0 chr2 185098487 185098800 -68157783 + AluSx SINE Alu 1 320 0 569 202 0 9 chr2 185098800 185098909 -68157674 + L1ME LINE L1 5577 5684 -437 707 130 15 23 chr2 185099347 185099478 -68157105 + LTR37A LTR ERV1 297 426 0 1568 193 50 40 chr2 185099535 185099913 -68156670 - L1ME3A LINE L1 -5 6165 5784 478 167 0 0 chr2 185099918 185099984 -68156599 - AluS SINE Alu -245 67 2 2731 195 27 7 chr2 185099985 185100549 -68156034 - L1 LINE L1 -3370 4195 3621 577 120 0 33 chr2 185100554 185100646 -68155937 - FLAM_A SINE Alu 0 142 54 3598 103 25 26 chr2 185100649 185100946 -68155637 - L1 LINE L1 -4219 3346 3049 2131 103 0 52 chr2 185100946 185101256 -68155327 - AluSx SINE Alu -18 294 1 3598 103 25 26 chr2 185101256 185101529 -68155054 - L1 LINE L1 -4516 3049 2777 842 162 7 0 chr2 185101530 185101666 -68154917 - FLAM_C SINE Alu -6 137 1 1091 108 7 0 chr2 185103059 185103243 -68153340 + AluSg/x SINE Alu 135 319 0 1784 135 21 18 chr2 185104064 185104345 -68152238 + AluJo SINE Alu 1 282 -30 2155 114 3 7 chr2 185104385 185104692 -68151891 - AluSg SINE Alu -4 306 1 1523 155 4 8 chr2 185105176 185105421 -68151162 + AluJo SINE Alu 39 282 -30 235 315 8 0 chr2 185105483 185105563 -68151020 + CT-rich Low_complexity Low_complexity 1 80 0 291 282 87 10 chr2 185105853 185105956 -68150627 - HAL1 LINE L1 -2393 114 4 640 307 59 6 chr2 185105979 185106337 -68150246 - L1ME4a LINE L1 -164 5957 5581 1626 139 131 0 chr2 185107209 185107476 -68149107 + AluJb SINE Alu 1 302 -10 563 239 70 14 chr2 185108910 185109052 -68147531 + MIR SINE MIR 87 236 -26 1951 107 65 34 chr2 185109591 185109882 -68146701 - AluSx SINE Alu -12 300 1 2223 121 0 0 chr2 185110165 185110470 -68146113 + AluSg SINE Alu 1 305 -5 2251 137 16 44 chr2 185110678 185111016 -68145567 - THE1C LTR MaLR 0 375 48 1916 93 33 40 chr2 185111016 185111318 -68145265 + AluSx SINE Alu 1 300 -12 2251 137 16 44 chr2 185111318 185111365 -68145218 - THE1C LTR MaLR -327 48 1 1808 247 118 33 chr2 185111501 185111739 -68144844 + L1ME3A LINE L1 4961 5177 -993 2554 69 0 0 chr2 185111739 185112045 -68144538 + AluY SINE Alu 1 306 -5 1808 247 118 33 chr2 185112045 185112892 -68143691 + L1ME3A LINE L1 5177 6162 -8 478 236 17 22 chr2 185113053 185113231 -68143352 + CT-rich Low_complexity Low_complexity 3 179 0 266 345 77 30 chr2 185113707 185113942 -68142641 - MIR SINE MIR -15 247 2 21 36 0 0 chr2 185114473 185114501 -68142082 + AT_rich Low_complexity Low_complexity 1 28 0 1200 186 101 8 chr2 185114503 185114750 -68141833 - MSTA LTR MaLR 0 428 159 1956 133 0 18 chr2 185115647 185115957 -68140626 + AluSx SINE Alu 1 305 0 180 163 23 23 chr2 185116086 185116129 -68140454 + L2 LINE L2 3266 3308 -5 2538 123 3 3 chr2 185116868 185117233 -68139350 - L1PB1 LINE L1 -2 6149 5785 1256 126 6 0 chr2 185117401 185117576 -68139007 - AluSx SINE Alu -135 177 2 937 246 47 41 chr2 185117577 185117919 -68138664 + L1ME3A LINE L1 3912 4255 -1891 * 2228 249 53 79 chr2 185117914 185119369 -68137214 + L1ME3A LINE L1 4752 6163 -7 183 375 0 16 chr2 185119933 185119997 -68136586 + L2 LINE L2 3195 3257 -15 866 199 94 0 chr2 185120839 185121020 -68135563 - MER3 DNA MER1_type 0 209 12 192 77 0 0 chr2 185121063 185121089 -68135494 + (TTCC)n Simple_repeat Simple_repeat 1 26 0 625 111 22 0 chr2 185121101 185121191 -68135392 - AluSg/x SINE Alu -6 306 215 369 62 0 0 chr2 185121236 185121284 -68135299 + MER85 DNA T2_type 90 137 -2 297 374 81 18 chr2 185121968 185122473 -68134110 + L2 LINE L2 1712 2248 -1066 467 233 17 9 chr2 185122489 185122605 -68133978 + MER103 DNA DNA 50 166 0 250 328 141 40 chr2 185122678 185122876 -68133707 + L2 LINE L2 3055 3272 0 187 276 176 45 chr2 185123226 185123425 -68133158 - L2 LINE L2 -658 2656 2432 1672 174 3 37 chr2 185123861 185124159 -68132424 + AluJo SINE Alu 1 288 -24 396 243 10 19 chr2 185124379 185124482 -68132101 + MER103 DNA DNA 64 165 -1 333 0 0 0 chr2 185124804 185124841 -68131742 + (TG)n Simple_repeat Simple_repeat 2 38 0 27 0 0 0 chr2 185124864 185124891 -68131692 + AT_rich Low_complexity Low_complexity 1 27 0 194 314 34 82 chr2 185125080 185125287 -68131296 - L3 LINE CR1 -1169 408 212 200 308 0 31 chr2 185125482 185125547 -68131036 - MIR SINE MIR -127 81 19 365 195 13 13 chr2 185126065 185126155 -68130428 - AluSg/x SINE Alu -9 293 215 199 356 0 0 chr2 185126283 185126328 -68130255 - L2 LINE L2 -95 3177 3133 295 311 113 0 chr2 185127564 185127670 -68128913 + MIR SINE MIR 97 214 -48 236 244 163 0 chr2 185127737 185127823 -68128760 - L1ME LINE L1 -303 5818 5719 697 234 57 36 chr2 185127858 185128050 -68128533 - MER58C DNA MER1_type -18 197 2 581 41 14 14 chr2 185130054 185130127 -68126456 - AluY SINE Alu -179 132 60 219 277 53 11 chr2 185130231 185130325 -68126258 - MIR SINE MIR -46 216 119 594 265 122 39 chr2 185130920 185131150 -68125433 + MIR SINE MIR 8 256 -6 187 274 161 0 chr2 185131167 185131229 -68125354 - L2 LINE L2 -665 2649 2578 194 304 18 0 chr2 185132188 185132244 -68124339 - L2 LINE L2 -16 3256 3200 2369 101 0 0 chr2 185132366 185132672 -68123911 - AluSq SINE Alu -7 306 1 3373 154 10 0 chr2 185132672 185133655 -68122928 - L1P5 LINE L1 -366 5785 4794 1681 169 14 27 chr2 185133662 185133957 -68122626 - AluJb SINE Alu -21 291 1 205 130 0 56 chr2 185134248 185134302 -68122281 + (TTTC)n Simple_repeat Simple_repeat 3 53 0 809 227 56 0 chr2 185134811 185135009 -68121574 - MER3 DNA MER1_type 0 209 1 1557 173 50 23 chr2 185135123 185135423 -68121160 + AluJb SINE Alu 1 308 -4 1154 162 30 17 chr2 185135759 185135994 -68120589 + L1PB4 LINE L1 5914 6151 -5 23 0 0 0 chr2 185135994 185136017 -68120566 + AT_rich Low_complexity Low_complexity 1 23 0 195 234 43 0 chr2 185136473 185136520 -68120063 - L3 LINE CR1 -5 1572 1524 374 278 135 15 chr2 185136717 185136850 -68119733 - MIR3 SINE MIR -56 152 4 230 203 31 16 chr2 185137045 185137109 -68119474 + L1ME4a LINE L1 5964 6028 -93 94 53 0 21 chr2 185137126 185137313 -68119270 + AT_rich Low_complexity Low_complexity 1 183 0 38 0 0 0 chr2 185137715 185137753 -68118830 + AT_rich Low_complexity Low_complexity 1 38 0 1337 165 5 0 chr2 185137753 185137959 -68118624 - AluJb SINE Alu -30 282 76 21 0 0 0 chr2 185138159 185138180 -68118403 + AT_rich Low_complexity Low_complexity 1 21 0 333 0 0 0 chr2 185138199 185138236 -68118347 + (TG)n Simple_repeat Simple_repeat 2 38 0 862 92 54 0 chr2 185138583 185138713 -68117870 + MER85 DNA T2_type 1 137 -2 1868 176 10 0 chr2 185139209 185139504 -68117079 - AluJo SINE Alu -14 298 1 1999 142 7 3 chr2 185139869 185140165 -68116418 + AluJb SINE Alu 1 297 -15 278 213 194 19 chr2 185140771 185140879 -68115704 + L2 LINE L2 2324 2450 -864 371 250 0 0 chr2 185141474 185141554 -68115029 + MIR SINE MIR 124 203 -59 307 223 80 54 chr2 185142011 185142123 -68114460 + L2 LINE L2 3156 3270 -2 442 176 28 34 chr2 185142669 185142845 -68113738 + CT-rich Low_complexity Low_complexity 2 176 0 878 191 25 0 chr2 185142855 185143012 -68113571 - AluJb SINE Alu -16 296 136 200 281 42 52 chr2 185143563 185143659 -68112924 - L3b LINE CR1 -326 1257 1163 203 267 0 0 chr2 185144007 185144052 -68112531 - L3 LINE CR1 -4 1573 1529 847 134 0 0 chr2 185144056 185144175 -68112408 + AluJb SINE Alu 1 119 -193 470 238 166 20 chr2 185144281 185144432 -68112151 + MER5A DNA MER1_type 7 179 -10 818 158 34 0 chr2 185145167 185145313 -68111270 + L1ME3A LINE L1 6019 6169 -1 236 274 88 0 chr2 185145523 185145625 -68110958 - MIR SINE MIR -44 218 108 2266 140 0 3 chr2 185145931 185146280 -68110303 + MER7A DNA MER2_type 1 346 0 506 301 30 12 chr2 185146295 185146461 -68110122 - MER5B DNA MER1_type -8 170 2 4034 188 42 13 chr2 185147970 185149232 -68107351 + L1MB8 LINE L1 4828 6125 -53 1958 149 7 3 chr2 185149246 185149535 -68107048 - AluJb SINE Alu -22 290 1 306 319 0 11 chr2 185149607 185149698 -68106885 + MLT1I LTR MaLR 132 221 -188 440 203 0 52 chr2 185149902 185150013 -68106570 - MER20 DNA MER1_type 0 219 112 847 147 0 22 chr2 185150651 185150787 -68105796 + FLAM_C SINE Alu 1 133 0 2325 253 26 31 chr2 185151304 185151395 -68105188 - MER115 DNA AcHobo 0 693 603 2477 81 0 3 chr2 185151395 185151702 -68104881 + AluY SINE Alu 1 306 -5 2325 253 26 31 chr2 185151702 185152254 -68104329 - MER115 DNA AcHobo -90 603 53 201 386 33 17 chr2 185153242 185153483 -68103100 + L2 LINE L2 955 1199 -2115 681 109 20 0 chr2 185153999 185154100 -68102483 - FLAM_C SINE Alu -20 123 21 247 349 23 23 chr2 185154105 185154234 -68102349 + L2 LINE L2 2570 2698 -616 339 359 74 41 chr2 185154544 185155042 -68101541 - L2 LINE L2 0 3272 2731 29594 101 10 12 chr2 185155629 185156297 -68100286 - L1PA8 LINE L1 -21 6466 5798 2524 68 3 0 chr2 185156297 185156605 -68099978 - AluY SINE Alu -2 309 1 29594 101 10 12 chr2 185156605 185161727 -68094856 - L1PA8 LINE L1 -689 5798 670 706 77 0 0 chr2 185161725 185161816 -68094767 - L1PA8 LINE L1 -6365 96 6 * 2028 152 3 0 chr2 185161951 185162261 -68094322 - AluSx SINE Alu 0 311 1 1019 189 22 0 chr2 185162394 185162579 -68094004 - MER5A DNA MER1_type 0 189 1 427 273 58 58 chr2 185162581 185162735 -68093848 - MER5B DNA MER1_type -24 154 1 1957 201 50 92 chr2 185165788 185166354 -68090229 + MLT1F LTR MaLR 1 542 0 22 0 0 0 chr2 185166953 185166975 -68089608 + AT_rich Low_complexity Low_complexity 1 22 0 2071 130 7 3 chr2 185166975 185167267 -68089316 - AluSx SINE Alu -19 293 1 2280 161 26 61 chr2 185170246 185170725 -68085858 + Charlie1b DNA MER1_type 3 462 -2299 1669 161 46 7 chr2 185170725 185171010 -68085573 - AluJo SINE Alu -16 296 1 2280 161 26 61 chr2 185171010 185171070 -68085513 + Charlie1b DNA MER1_type 462 523 0 1598 178 0 39 chr2 185171101 185171410 -68085173 - AluJb SINE Alu -15 297 1 21 0 0 0 chr2 185171460 185171481 -68085102 + AT_rich Low_complexity Low_complexity 1 21 0 248 349 12 12 chr2 185172279 185172362 -68084221 - MIR SINE MIR -169 93 11 822 250 134 16 chr2 185172363 185172873 -68083710 + L1MEc LINE L1 2234 2769 -3446 307 193 72 24 chr2 185172879 185172962 -68083621 + L1MEc LINE L1 2992 3078 -3137 954 178 76 0 chr2 185172977 185173162 -68083421 + AluJo SINE Alu 112 310 -2 814 288 60 44 chr2 185173176 185173589 -68082994 + L1MEc LINE L1 3512 3931 -2284 1174 344 127 38 chr2 185173691 185174121 -68082462 - L2 LINE L2 -1349 1965 1575 1559 141 65 0 chr2 185174121 185174398 -68082185 + AluSx SINE Alu 5 299 -13 1174 344 127 38 chr2 185174398 185175112 -68081471 - L2 LINE L2 -1739 1575 719 1120 62 0 0 chr2 185175145 185175290 -68081293 + L1PA5 LINE L1 6006 6150 -4 259 322 51 8 chr2 185175291 185175409 -68081174 - L2 LINE L2 -2981 333 211 1371 205 59 36 chr2 185175419 185175775 -68080808 - MER21B LTR ERV1 -33 830 467 2239 122 94 5 chr2 185175776 185176169 -68080414 + MSTA LTR MaLR 1 428 0 * 2753 167 4 4 chr2 185176169 185176624 -68079959 - MER21B LTR ERV1 -393 470 16 2067 125 27 0 chr2 185176624 185176919 -68079664 - AluSg SINE Alu -7 303 1 2376 100 0 0 chr2 185177555 185177854 -68078729 + AluSg SINE Alu 1 299 -11 1787 122 0 4 chr2 185178024 185178279 -68078304 - AluSx SINE Alu -58 254 1 21 0 0 0 chr2 185179053 185179074 -68077509 + AT_rich Low_complexity Low_complexity 1 21 0 367 266 137 0 chr2 185179675 185179814 -68076769 + MER103 DNA DNA 8 165 -1 304 270 162 17 chr2 185180676 185180812 -68075771 - MIR SINE MIR -75 133 16 348 280 34 68 chr2 185180950 185181068 -68075515 + L2 LINE L2 3153 3266 -6 345 373 75 6 chr2 185181554 185181715 -68074868 + MIR3 SINE MIR 16 187 -21 352 272 77 56 chr2 185182193 185182516 -68074067 + L1M4 LINE L1 4507 4836 -1310 258 301 48 34 chr2 185182905 185183051 -68073532 + LTR67 LTR ERVL 410 557 0 2069 98 0 14 chr2 185183796 185184081 -68072502 + AluSx SINE Alu 2 282 -30 501 311 108 55 chr2 185184191 185184526 -68072057 + ERVL LTR ERVL 1018 1334 -4430 769 127 32 16 chr2 185184526 185184652 -68071931 + FLAM_A SINE Alu 1 128 -5 501 311 108 55 chr2 185184652 185185113 -68071470 + ERVL LTR ERVL 1334 1856 -3908 325 312 22 14 chr2 185185187 185185325 -68071258 + ERVL LTR ERVL 2613 2751 -3013 370 244 59 44 chr2 185185415 185185550 -68071033 + ERVL LTR ERVL 2897 3033 -2731 309 308 135 64 chr2 185185665 185185913 -68070670 + ERVL LTR ERVL 3490 3719 -1935 856 139 0 29 chr2 185185913 185186050 -68070533 + FLAM_C SINE Alu 1 133 0 309 308 135 64 chr2 185186050 185186253 -68070330 + ERVL LTR ERVL 3719 3973 -1681 231 114 0 0 chr2 185186400 185186435 -68070148 + (TG)n Simple_repeat Simple_repeat 1 35 0 185 324 99 14 chr2 185186525 185186596 -68069987 - MIR3 SINE MIR -50 158 82 445 202 36 0 chr2 185186993 185187077 -68069506 + MER33 DNA MER1_type 2 88 -236 191 190 0 13 chr2 185187110 185187189 -68069394 + (TA)n Simple_repeat Simple_repeat 1 78 0 641 157 13 85 chr2 185187203 185187333 -68069250 + MER33 DNA MER1_type 105 212 -2373 2798 113 36 5 chr2 185187333 185187774 -68068809 + L1MC1 LINE L1 5879 6333 0 641 157 13 85 chr2 185187774 185187878 -68068705 + MER33 DNA MER1_type 212 322 -2 181 148 0 148 chr2 185188050 185188104 -68068479 + L2 LINE L2 3149 3194 -78 383 332 118 68 chr2 185188696 185189163 -68067420 + L2 LINE L2 2370 2859 -455 265 279 13 0 chr2 185189354 185189433 -68067150 - MLT1K LTR MaLR -6 582 503 225 260 30 60 chr2 185189644 185189744 -68066839 - MLT1K LTR MaLR -302 286 190 45 0 0 0 chr2 185189920 185189965 -68066618 + AT_rich Low_complexity Low_complexity 1 45 0 1586 135 81 4 chr2 185190412 185190672 -68065911 + AluJb SINE Alu 1 280 -32 180 0 0 0 chr2 185190674 185190694 -68065889 + (CAAAA)n Simple_repeat Simple_repeat 3 22 0 295 186 0 0 chr2 185191692 185191762 -68064821 + L1MA4 LINE L1 6226 6295 -5 2327 93 13 3 chr2 185191835 185192135 -68064448 - AluSq SINE Alu -10 303 1 534 190 65 110 chr2 185192413 185192494 -68064089 + L1MC5 LINE L1 7618 7701 -260 728 106 0 0 chr2 185192494 185192598 -68063985 - U13 snRNA snRNA 0 104 1 534 190 65 110 chr2 185192598 185192826 -68063757 + L1MC5 LINE L1 7701 7913 -48 866 150 0 0 chr2 185192832 185192959 -68063624 + AluJo/FLAM SINE Alu 1 127 -185 438 152 0 0 chr2 185192959 185193025 -68063558 + AluJ/FRAM SINE Alu 229 294 -18 541 289 64 5 chr2 185193202 185193389 -68063194 + MIR SINE MIR 53 250 -12 238 338 28 0 chr2 185193410 185193481 -68063102 - MIR SINE MIR -110 98 26 263 271 73 56 chr2 185193787 185193897 -68062686 - MIR SINE MIR -90 118 7 1538 186 45 14 chr2 185193897 185194187 -68062396 - AluJo SINE Alu -11 301 3 291 347 7 60 chr2 185194674 185194824 -68061759 - L2 LINE L2 -15 3257 3116 738 319 29 61 chr2 185195273 185195649 -68060934 - L2 LINE L2 -4 3268 2905 344 277 25 69 chr2 185195731 185195890 -68060693 - L2 LINE L2 -608 2706 2555 183 129 0 0 chr2 185195962 185195993 -68060590 + (TG)n Simple_repeat Simple_repeat 1 31 0 195 170 0 0 chr2 185196121 185196168 -68060415 + (TG)n Simple_repeat Simple_repeat 1 47 0 219 36 0 0 chr2 185196315 185196343 -68060240 + (TG)n Simple_repeat Simple_repeat 1 28 0 270 0 0 0 chr2 185196403 185196433 -68060150 + (TG)n Simple_repeat Simple_repeat 1 30 0 198 0 0 0 chr2 185196432 185196454 -68060129 + (GA)n Simple_repeat Simple_repeat 1 22 0 * 189 0 0 0 chr2 185197544 185197565 -68059018 + (TG)n Simple_repeat Simple_repeat 1 21 0 198 0 0 0 chr2 185197844 185197866 -68058717 + (TG)n Simple_repeat Simple_repeat 1 22 0 180 0 0 0 chr2 185198026 185198046 -68058537 + (GA)n Simple_repeat Simple_repeat 1 20 0 991 68 7 7 chr2 185198226 185198373 -68058210 - L1P4 LINE L1 -360 5808 5662 21556 137 25 3 chr2 185198501 185199256 -68057327 - L1P4 LINE L1 -508 5660 4923 2502 84 0 0 chr2 185199256 185199567 -68057016 + AluSp SINE Alu 1 311 -2 21556 137 25 3 chr2 185199567 185202946 -68053637 - L1P4 LINE L1 -1245 4923 1437 264 316 0 32 chr2 185203060 185203155 -68053428 - L2 LINE L2 -674 2640 2549 2110 121 7 3 chr2 185203373 185203680 -68052903 - AluSg SINE Alu -2 308 1 1840 156 3 16 chr2 185204190 185204498 -68052085 + AluJb SINE Alu 2 305 -7 490 310 66 14 chr2 185204783 185204996 -68051587 - MIR SINE MIR -31 231 8 1316 205 60 17 chr2 185206115 185206462 -68050121 - L1ME3A LINE L1 -73 6097 5736 22 0 0 0 chr2 185206650 185206672 -68049911 + AT_rich Low_complexity Low_complexity 1 22 0 383 185 83 16 chr2 185207485 185207635 -68048948 + MER3 DNA MER1_type 4 209 0 225 200 0 20 chr2 185207591 185207641 -68048942 - MER3 DNA MER1_type -119 90 42 * 196 281 41 99 chr2 185207856 185207977 -68048606 - MIR3 SINE MIR -46 162 49 2268 96 0 16 chr2 185207978 185208290 -68048293 - AluSx SINE Alu -5 307 1 1033 268 117 42 chr2 185208389 185208799 -68047784 - L2 LINE L2 0 3313 2873 2405 103 0 0 chr2 185209219 185209529 -68047054 + AluSx SINE Alu 1 310 -2 242 292 141 16 chr2 185210244 185210436 -68046147 - L1ME LINE L1 -295 5826 5611 615 296 28 0 chr2 185213491 185213667 -68042916 + MIR SINE MIR 34 214 -48 2078 163 79 25 chr2 185213750 185214154 -68042429 - MSTA LTR MaLR 0 428 3 1214 225 61 27 chr2 185214232 185214525 -68042058 - AluJo SINE Alu -8 304 2 263 241 115 23 chr2 185215383 185215470 -68041113 - MER5A DNA MER1_type -94 95 1 2018 106 12 27 chr2 185215689 185216018 -68040565 - LTR17 LTR ERV1 -456 324 1 1925 84 32 7 chr2 185216018 185216303 -68040280 - HERV17 LTR ERV1 0 8626 8335 268 77 0 0 chr2 185216293 185216332 -68040251 - HERV17 LTR ERV1 -1078 7548 7510 * 4876 41 2 0 chr2 185216325 185216939 -68039644 - HERV17 LTR ERV1 -2607 6019 5405 * 9802 58 6 2 chr2 185216918 185218188 -68038395 - HERV17 LTR ERV1 -4872 3754 2480 4964 64 27 21 chr2 185218389 185219092 -68037491 - HERV17 LTR ERV1 -7919 707 1 3483 78 45 16 chr2 185219092 185219602 -68036981 - LTR17 LTR ERV1 0 780 256 1550 175 37 17 chr2 185220649 185220946 -68035637 - AluJo SINE Alu -9 303 1 216 0 0 0 chr2 185221341 185221365 -68035218 + (TG)n Simple_repeat Simple_repeat 2 25 0 21 0 0 0 chr2 185221418 185221439 -68035144 + AT_rich Low_complexity Low_complexity 1 21 0 386 317 146 50 chr2 185221465 185221912 -68034671 - L1ME3A LINE L1 -211 5951 5460 2044 115 0 21 chr2 185222959 185223272 -68033311 - AluSc SINE Alu 0 307 1 1796 105 19 4 chr2 185223579 185223916 -68032667 + Tigger4(Zombi) DNA MER2_type 1 2730 -1 421 254 172 30 chr2 185224034 185224203 -68032380 + MIR3 SINE MIR 13 205 -3 422 226 99 17 chr2 185227004 185227185 -68029398 - L1MC5 LINE L1 -222 7739 7544 204 40 0 0 chr2 185228435 185228460 -68028123 + (TG)n Simple_repeat Simple_repeat 1 25 0 235 302 66 112 chr2 185228859 185229101 -68027482 - LTR67 LTR ERVL -295 262 32 345 305 136 11 chr2 185229348 185229525 -68027058 - MIR SINE MIR -63 199 1 263 221 87 40 chr2 185229854 185230003 -68026580 + L1MEd LINE L1 3 158 -5961 2250 113 28 28 chr2 185230384 185230783 -68025800 - L1PA11 LINE L1 0 6174 5776 3562 269 36 54 chr2 185230896 185232551 -68024032 - L1P3 LINE L1 -4826 1635 12 4009 85 38 10 chr2 185232798 185233801 -68022782 - MER11A LTR ERVK 0 1266 1 2012 132 87 29 chr2 185234462 185234841 -68021742 - MSTB1 LTR MaLR -29 403 3 507 262 27 0 chr2 185234841 185235093 -68021490 + L1ME LINE L1 5179 5447 -715 1852 254 33 77 chr2 185235108 185236014 -68020569 - L1ME LINE L1 -5199 871 6 220 200 67 78 chr2 185236386 185236476 -68020107 + MIR SINE MIR 94 182 -80 258 32 0 0 chr2 185236748 185236779 -68019804 + (TA)n Simple_repeat Simple_repeat 2 32 0 242 210 12 25 chr2 185236801 185236882 -68019701 + T-rich Low_complexity Low_complexity 3 82 0 254 219 41 55 chr2 185236900 185236973 -68019610 + L2 LINE L2 3136 3207 -65 323 315 19 43 chr2 185237247 185237409 -68019174 + L2 LINE L2 3144 3301 -12 378 291 62 45 chr2 185237547 185237754 -68018829 - MIR SINE MIR -12 250 41 2264 71 3 35 chr2 185237890 185238200 -68018383 - AluY SINE Alu -11 300 1 23 0 0 0 chr2 185239504 185239527 -68017056 + AT_rich Low_complexity Low_complexity 1 23 0 481 244 55 8 chr2 185240025 185240152 -68016431 + FLAM_A SINE Alu 1 133 0 189 0 0 0 chr2 185240734 185240755 -68015828 + (CA)n Simple_repeat Simple_repeat 2 22 0 422 260 77 72 chr2 185240937 185241172 -68015411 - L2 LINE L2 -54 3259 3024 388 125 25 25 chr2 185241789 185241869 -68014714 + L1MC4a LINE L1 7115 7194 -614 245 246 16 0 chr2 185241885 185241946 -68014637 - L1MC4a LINE L1 -535 7273 7212 * 2490 212 46 21 chr2 185241924 185242552 -68014031 + L1MC4a LINE L1 7165 7808 0 24 77 0 0 chr2 185242806 185242858 -68013725 + AT_rich Low_complexity Low_complexity 1 52 0 1988 119 60 0 chr2 185244317 185244602 -68011981 + AluSx SINE Alu 3 304 -8 579 256 71 58 chr2 185244817 185245336 -68011247 - L1MC5 LINE L1 -168 7793 7268 2412 97 0 0 chr2 185245888 185246198 -68010385 + AluSx SINE Alu 1 310 -2 181 326 20 31 chr2 185246258 185246356 -68010227 - MIR SINE MIR -50 212 116 400 227 50 50 chr2 185246889 185247030 -68009553 - MIR SINE MIR -34 228 88 23 33 0 0 chr2 185247381 185247411 -68009172 + AT_rich Low_complexity Low_complexity 1 30 0 347 327 55 9 chr2 185247500 185247610 -68008973 - L2 LINE L2 0 3272 3158 2189 65 45 3 chr2 185247899 185248190 -68008393 - AluY SINE Alu -8 303 1 260 324 91 17 chr2 185248281 185248509 -68008074 - L2 LINE L2 -444 2870 2565 22 56 0 0 chr2 185249001 185249037 -68007546 + AT_rich Low_complexity Low_complexity 1 36 0 643 185 52 7 chr2 185249930 185250065 -68006518 + MIR SINE MIR 77 217 -45 683 296 28 73 chr2 185250105 185250392 -68006191 + L2 LINE L2 2188 2461 -853 4267 190 73 48 chr2 185250423 185251170 -68005413 - L1ME1 LINE L1 -9 6226 5499 1642 189 0 13 chr2 185251170 185251476 -68005107 - AluJb SINE Alu -10 302 1 4267 190 73 48 chr2 185251476 185251593 -68004990 - L1ME1 LINE L1 -736 5499 5386 2331 82 0 0 chr2 185251593 185251886 -68004697 - AluY SINE Alu -18 293 1 4267 190 73 48 chr2 185251886 185252713 -68003870 - L1ME1 LINE L1 -849 5386 4581 351 65 0 0 chr2 185252713 185252759 -68003824 + (TA)n Simple_repeat Simple_repeat 2 47 0 1554 200 21 0 chr2 185252759 185253039 -68003544 - AluJo SINE Alu -26 286 1 4267 190 73 48 chr2 185253039 185253525 -68003058 - L1ME1 LINE L1 -1653 4582 3991 3158 246 98 53 chr2 185253568 185255053 -68001530 - L1ME1 LINE L1 -3092 3123 1706 2010 127 7 7 chr2 185255053 185255353 -68001230 - AluSq SINE Alu -13 300 1 3158 246 98 53 chr2 185255353 185255474 -68001109 - L1ME1 LINE L1 -4509 1706 1592 2142 88 40 10 chr2 185255474 185255770 -68000813 - AluSx SINE Alu -7 305 1 3158 246 98 53 chr2 185255770 185256714 -67999869 - L1ME1 LINE L1 -4623 1592 692 1189 83 55 28 chr2 185256714 185256895 -67999688 - MER30B DNA MER1_type -4 186 1 3158 246 98 53 chr2 185256895 185257237 -67999346 - L1ME1 LINE L1 -5523 692 367 827 143 0 50 chr2 185257237 185257377 -67999206 - FLAM_C SINE Alu 0 133 1 3158 246 98 53 chr2 185257377 185257466 -67999117 - L1ME1 LINE L1 -5848 367 37 741 234 7 0 chr2 185257822 185257967 -67998616 + FRAM SINE Alu 1 145 -31 197 222 0 0 chr2 185258114 185258150 -67998433 - MIR SINE MIR -12 250 215 20154 82 8 0 chr2 185258534 185262110 -67994473 + L1PA7 LINE L1 2547 6153 -1 421 179 12 12 chr2 185262164 185262248 -67994335 + MIR SINE MIR 123 206 -56 2486 62 0 10 chr2 185263894 185264202 -67992381 + AluY SINE Alu 3 307 -4 1113 244 123 3 chr2 185264381 185264689 -67991894 - MER2 DNA MER2_type 0 345 1 583 287 66 0 chr2 185265001 185265182 -67991401 + MIR SINE MIR 64 256 -6 2165 98 3 0 chr2 185265706 185266023 -67990560 - AluSq SINE Alu 0 318 1 21 0 0 0 chr2 185266288 185266309 -67990274 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 185266753 185266775 -67989808 + AT_rich Low_complexity Low_complexity 1 22 0 1577 193 41 0 chr2 185266805 185267075 -67989508 + AluJo SINE Alu 1 281 -31 8606 152 54 61 chr2 185267148 185268916 -67987667 - MER52A LTR ERV1 0 1755 1 504 301 64 23 chr2 185269005 185269347 -67987236 - L1ME4a LINE L1 -245 5876 5521 201 211 35 70 chr2 185269800 185269857 -67986726 + MIR SINE MIR 205 259 -3 21 36 0 0 chr2 185270527 185270555 -67986028 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 185271576 185271600 -67984983 + AT_rich Low_complexity Low_complexity 1 24 0 198 352 20 92 chr2 185271683 185271933 -67984650 - L2 LINE L2 -128 3144 2913 2225 122 0 22 chr2 185272202 185272521 -67984062 + AluSx SINE Alu 1 312 0 593 280 31 42 chr2 185272582 185272775 -67983808 + MIR SINE MIR 2 192 -70 596 317 81 41 chr2 185273353 185274059 -67982524 - HAL1b LINE L1 -578 770 37 2344 125 76 10 chr2 185276037 185276444 -67980139 - MER61C LTR ERV1 0 434 1 408 266 0 19 chr2 185276519 185276654 -67979929 - L1P4 LINE L1 -340 5825 5701 2065 183 53 42 chr2 185277189 185277719 -67978864 - L1MB7 LINE L1 -138 6440 5905 * 4072 233 50 19 chr2 185277709 185279124 -67977459 - L1MB7 LINE L1 -2751 3789 2335 264 222 54 146 chr2 185279111 185279203 -67977380 - L1M4b LINE L1 -4482 2656 2588 * 1439 155 4 0 chr2 185279203 185279435 -67977148 + MER46A DNA MER2_type 1 233 -3 264 222 54 146 chr2 185279435 185279527 -67977056 - L1M4b LINE L1 -4550 2588 2489 1965 260 40 7 chr2 185279789 185280520 -67976063 - L1M4b LINE L1 -4651 2308 1563 1920 281 54 23 chr2 185280533 185281142 -67975441 - L1M4b LINE L1 -5858 1001 374 2222 181 19 17 chr2 185281198 185281674 -67974909 + L1MB8 LINE L1 5639 6115 -63 2256 77 7 17 chr2 185281678 185281976 -67974607 + AluSp SINE Alu 1 295 -18 4430 36 2 2 chr2 185281976 185282510 -67974073 + L1PA5 LINE L1 5612 6145 -9 44 0 0 0 chr2 185282511 185282555 -67974028 + AT_rich Low_complexity Low_complexity 1 44 0 305 179 30 0 chr2 185282555 185282622 -67973961 + L1MB8 LINE L1 6108 6176 -2 188 0 74 0 chr2 185283155 185283182 -67973401 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 225 159 0 0 chr2 185283978 185284022 -67972561 + (TA)n Simple_repeat Simple_repeat 2 45 0 24 32 0 0 chr2 185284550 185284581 -67972002 + AT_rich Low_complexity Low_complexity 1 31 0 628 291 67 29 chr2 185284711 185284921 -67971662 - LTR33 LTR ERVL -301 220 3 1990 136 0 7 chr2 185286123 185286425 -67970158 - AluSx SINE Alu -12 300 1 1619 191 0 17 chr2 185286548 185286847 -67969736 - AluJo SINE Alu -18 294 1 2120 139 0 0 chr2 185287414 185287715 -67968868 + AluJb SINE Alu 1 301 -11 2124 70 0 15 chr2 185289996 185290269 -67966314 - AluY SINE Alu -16 295 27 2489 60 0 0 chr2 185290863 185291163 -67965420 - AluY SINE Alu -11 300 1 27 29 0 0 chr2 185292240 185292274 -67964309 + AT_rich Low_complexity Low_complexity 1 34 0 396 261 80 83 chr2 185292468 185292626 -67963957 - L1MC4 LINE L1 0 8042 7885 2225 111 7 0 chr2 185292626 185292932 -67963651 - AluSq SINE Alu -5 308 1 396 261 80 83 chr2 185292932 185293050 -67963533 - L1MC4 LINE L1 -157 7885 7765 1868 102 36 69 chr2 185293050 185293355 -67963228 - AluSx SINE Alu -17 295 1 396 261 80 83 chr2 185293355 185293464 -67963119 - L1MC4 LINE L1 -277 7765 7657 1798 176 0 0 chr2 185293552 185293860 -67962723 - AluSx SINE Alu 0 312 5 222 347 28 0 chr2 185295234 185295306 -67961277 - L2 LINE L2 -217 3055 2982 328 316 133 49 chr2 185295515 185295800 -67960783 - L2 LINE L2 -584 2730 2422 230 324 0 0 chr2 185296520 185296588 -67959995 + L2 LINE L2 2654 2721 -593 279 242 145 31 chr2 185297133 185297268 -67959315 - MIR SINE MIR -62 146 8 2279 92 0 31 chr2 185297402 185297719 -67958864 + AluSx SINE Alu 1 307 -5 816 135 0 58 chr2 185301472 185301628 -67954955 + AluSg/x SINE Alu 163 309 -1 193 307 193 11 chr2 185301749 185301837 -67954746 - L2 LINE L2 0 3272 3169 1884 133 0 56 chr2 185303698 185304021 -67952562 - AluJb SINE Alu -7 305 1 566 146 29 0 chr2 185307648 185307751 -67948832 - L1MA4 LINE L1 -11 6289 6184 338 326 39 0 chr2 185308981 185309110 -67947473 - L2 LINE L2 -1 3312 3179 869 183 134 15 chr2 185310038 185310240 -67946343 - MER46A DNA MER2_type -10 226 1 2040 100 7 3 chr2 185310677 185310976 -67945607 + AluY SINE Alu 1 300 -11 1197 209 46 68 chr2 185311376 185311744 -67944839 - MLT1A1 LTR MaLR 0 365 6 297 315 81 61 chr2 185312368 185312384 -67944199 - L2 LINE L2 -1060 2254 2240 1596 189 11 7 chr2 185312384 185312689 -67943894 - AluJb SINE Alu 0 312 1 297 315 81 61 chr2 185312689 185312967 -67943616 - L2 LINE L2 -1074 2240 1954 27 73 0 0 chr2 185313439 185313494 -67943089 + AT_rich Low_complexity Low_complexity 1 55 0 1299 157 0 14 chr2 185314143 185314353 -67942230 - AluJb SINE Alu -22 290 84 1715 164 11 0 chr2 185314374 185314683 -67941900 - AluJo SINE Alu 0 312 1 207 222 19 0 chr2 185315920 185315974 -67940609 + T-rich Low_complexity Low_complexity 3 57 0 687 142 33 0 chr2 185317299 185317419 -67939164 + L1PA16 LINE L1 6034 6157 -9 21 0 0 0 chr2 185317673 185317694 -67938889 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 185318516 185318544 -67938039 + AT_rich Low_complexity Low_complexity 1 28 0 2564 207 31 64 chr2 185318963 185319443 -67937140 - L1MC4a LINE L1 -20 7788 7251 2300 90 0 7 chr2 185319443 185319742 -67936841 + AluSq SINE Alu 1 297 -16 2564 207 31 64 chr2 185319742 185320133 -67936450 - L1MC4a LINE L1 -557 7251 6848 4037 76 3 26 chr2 185321024 185321591 -67934992 - MER41A LTR ERV1 0 554 1 608 194 146 0 chr2 185323372 185323516 -67933067 - L1MA10 LINE L1 0 6334 6170 2182 82 7 17 chr2 185323751 185324043 -67932540 - AluSx SINE Alu -23 289 1 491 286 93 22 chr2 185324499 185324681 -67931902 + MIR SINE MIR 65 259 -3 654 267 68 28 chr2 185325876 185326127 -67930456 + L2 LINE L2 3052 3312 -1 2020 115 0 0 chr2 185327511 185327789 -67928794 - AluSx SINE Alu -2 310 33 416 323 96 26 chr2 185328111 185328340 -67928243 - MIR SINE MIR -3 259 15 2012 141 0 0 chr2 185328437 185328721 -67927862 + AluJb SINE Alu 1 284 -28 31 44 0 0 chr2 185328736 185328781 -67927802 + AT_rich Low_complexity Low_complexity 1 45 0 505 301 46 0 chr2 185329314 185329467 -67927116 + L2 LINE L2 2080 2239 -1075 538 290 131 56 chr2 185329479 185329902 -67926681 + L2 LINE L2 2561 3056 -257 300 245 45 103 chr2 185329904 185330059 -67926524 + L2 LINE L2 3168 3313 0 2497 65 0 3 chr2 185330141 185330448 -67926135 - AluSq SINE Alu -7 306 1 1552 182 3 26 chr2 185330484 185330786 -67925797 + AluJo SINE Alu 9 303 -9 666 276 100 13 chr2 185331063 185331302 -67925281 + MIR SINE MIR 7 255 -7 207 0 0 0 chr2 185331302 185331325 -67925258 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4461 197 49 12 chr2 185332478 185334349 -67922234 + L1MD1 LINE L1 4159 6100 -142 1674 183 6 46 chr2 185335867 185336190 -67920393 - AluJo SINE Alu -2 310 1 240 200 214 0 chr2 185337768 185337838 -67918745 - MIR3 SINE MIR -6 202 118 23 0 0 0 chr2 185341127 185341150 -67915433 + AT_rich Low_complexity Low_complexity 1 23 0 411 145 0 0 chr2 185341323 185341392 -67915191 + (TA)n Simple_repeat Simple_repeat 1 69 0 21 0 0 0 chr2 185343441 185343462 -67913121 + AT_rich Low_complexity Low_complexity 1 21 0 727 307 175 42 chr2 185345517 185346425 -67910158 - L3 LINE CR1 -13 1564 536 188 54 108 54 chr2 185346981 185347018 -67909565 + L3 LINE CR1 1537 1575 -2 243 333 65 26 chr2 185347125 185347278 -67909305 - MIR SINE MIR -83 179 21 246 32 32 0 chr2 185347384 185347415 -67909168 - LTR14A LTR ERVK 0 344 313 274 297 81 55 chr2 185347525 185347761 -67908822 - L3 LINE CR1 -800 777 536 188 54 108 54 chr2 185348317 185348354 -67908229 + L3 LINE CR1 1537 1575 -2 26 0 0 0 chr2 185348394 185348420 -67908163 + AT_rich Low_complexity Low_complexity 1 26 0 435 307 47 8 chr2 185348460 185348629 -67907954 - MIR SINE MIR -58 150 8 3948 78 92 43 chr2 185348719 185349296 -67907287 - LTR14B LTR ERVK 0 608 4 347 244 13 0 chr2 185352112 185352190 -67904393 - MER116 DNA Mariner -1 79 1 603 221 8 39 chr2 185352521 185352648 -67903935 + FLAM_A SINE Alu 2 124 -9 324 252 168 8 chr2 185357122 185357241 -67899342 - MIR SINE MIR -58 204 67 1703 179 7 7 chr2 185357927 185358217 -67898366 + AluJo SINE Alu 13 302 -10 2449 128 85 39 chr2 185359457 185359894 -67896689 + MSTB2 LTR MaLR 1 457 0 4051 232 66 99 chr2 185359896 185361527 -67895056 + MSTB2-int LTR MaLR 3 1580 0 2697 131 54 27 chr2 185361527 185361971 -67894612 + MSTB2 LTR MaLR 1 456 -1 1582 133 17 0 chr2 185362749 185362983 -67893600 - MSTB LTR MaLR -188 238 1 335 287 36 60 chr2 185363050 185363217 -67893366 + L2 LINE L2 2480 2642 -672 2195 136 0 0 chr2 185363563 185363865 -67892718 - AluSx SINE Alu -10 302 1 2103 124 66 33 chr2 185363975 185364226 -67892357 + THE1C LTR MaLR 1 269 -106 2410 81 0 3 chr2 185364226 185364534 -67892049 + AluY SINE Alu 1 307 -4 2103 124 66 33 chr2 185364534 185364645 -67891938 + THE1C LTR MaLR 269 375 0 303 294 92 33 chr2 185364826 185364979 -67891604 + MIR SINE MIR 58 219 -43 2352 85 0 16 chr2 185365161 185365466 -67891117 + AluSc SINE Alu 1 300 -9 527 205 0 16 chr2 185365784 185365906 -67890677 - MER20B DNA MER1_type 0 783 664 1036 278 59 33 chr2 185366296 185366849 -67889734 - L1ME3 LINE L1 -306 5856 5201 24 77 0 0 chr2 185366871 185366923 -67889660 + AT_rich Low_complexity Low_complexity 1 52 0 699 272 47 49 chr2 185366948 185367334 -67889249 - L1ME3 LINE L1 -1112 5034 4650 446 217 50 8 chr2 185367338 185367458 -67889125 - MER20B DNA MER1_type -114 669 545 311 213 16 0 chr2 185367454 185367515 -67889068 - MER20B DNA MER1_type -716 67 6 * 2191 109 0 10 chr2 185367625 185367927 -67888656 - AluSq SINE Alu -10 303 5 603 171 119 45 chr2 185368858 185369034 -67887549 + MER53 DNA DNA 1 189 0 2219 125 0 0 chr2 185369415 185369718 -67886865 - AluSc SINE Alu -6 303 1 2334 110 0 0 chr2 185370524 185370832 -67885751 - AluSq SINE Alu -5 308 1 321 321 131 7 chr2 185373043 185373180 -67883403 - MIR3 SINE MIR -34 174 21 599 249 174 30 chr2 185373404 185373737 -67882846 + MLT1J2 LTR MaLR 70 450 0 292 315 69 73 chr2 185373743 185373975 -67882608 - L2 LINE L2 -11 3261 3031 1611 165 34 73 chr2 185374008 185374390 -67882193 + MLT1A2 LTR MaLR 8 374 0 2400 106 3 0 chr2 185376172 185376483 -67880100 - AluSx SINE Alu 0 312 1 479 288 10 25 chr2 185376658 185376856 -67879727 + L1MC4a LINE L1 5688 5882 -1926 549 267 97 0 chr2 185377334 185377499 -67879084 + MIR SINE MIR 12 192 -70 1924 152 3 7 chr2 185378580 185378869 -67877714 + AluJb SINE Alu 5 294 -18 711 65 0 0 chr2 185378869 185378962 -67877621 + (TA)n Simple_repeat Simple_repeat 2 94 0 1924 152 3 7 chr2 185378962 185378981 -67877602 + AluJb SINE Alu 294 312 0 322 254 94 7 chr2 185379141 185379279 -67877304 - L1ME4a LINE L1 -9 6112 5963 1394 185 104 8 chr2 185379395 185379655 -67876928 + AluJb SINE Alu 3 287 -25 255 79 0 0 chr2 185380033 185380071 -67876512 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 4124 187 50 52 chr2 185380072 185380304 -67876279 - L1MC1 LINE L1 -5 6328 6097 1408 181 129 41 chr2 185380304 185380668 -67875915 + MSTD LTR MaLR 1 396 0 4124 187 50 52 chr2 185380668 185381340 -67875243 - L1MC1 LINE L1 -236 6097 5426 293 214 0 21 chr2 185381736 185381881 -67874702 + C-rich Low_complexity Low_complexity 1 142 0 1981 179 18 0 chr2 185382063 185382399 -67874184 - L1ME4a LINE L1 -566 5767 5426 315 0 0 0 chr2 185382725 185382760 -67873823 + (CA)n Simple_repeat Simple_repeat 1 35 0 252 200 47 71 chr2 185383153 185383238 -67873345 + L2 LINE L2 3188 3270 -2 333 0 0 0 chr2 185384522 185384559 -67872024 + (CA)n Simple_repeat Simple_repeat 2 38 0 1408 154 23 0 chr2 185385344 185385565 -67871018 - MER47B DNA MER2_type 0 418 193 450 217 0 0 chr2 185385582 185385665 -67870918 - MER47B DNA MER2_type -335 83 1 297 75 0 0 chr2 185385739 185385779 -67870804 + (TTCA)n Simple_repeat Simple_repeat 2 41 0 457 323 58 77 chr2 185385779 185386144 -67870439 - L2 LINE L2 -9 3263 2906 244 161 0 46 chr2 185386873 185387003 -67869580 + (CACCC)n Simple_repeat Simple_repeat 1 124 0 268 198 37 49 chr2 185387018 185387142 -67869441 + (CACCC)n Simple_repeat Simple_repeat 4 127 -36 188 33 0 33 chr2 185387142 185387172 -67869411 + (CACAC)n Simple_repeat Simple_repeat 1 29 0 268 198 37 49 chr2 185387172 185387209 -67869374 + (CACCC)n Simple_repeat Simple_repeat 127 163 0 208 60 60 40 chr2 185387214 185387264 -67869319 + C-rich Low_complexity Low_complexity 6 56 0 1553 169 0 19 chr2 185387730 185387996 -67868587 + AluJo SINE Alu 29 289 -23 1165 261 34 28 chr2 185388075 185388427 -67868156 - MLT1A2 LTR MaLR 0 374 21 1517 155 22 56 chr2 185389111 185389434 -67867149 + AluJb SINE Alu 1 312 0 2017 109 10 55 chr2 185389643 185389954 -67866629 - AluSx SINE Alu -15 297 1 282 231 10 67 chr2 185390096 185390200 -67866383 + LTR67 LTR ERVL 457 554 -3 260 178 0 0 chr2 185391325 185391370 -67865213 - L2 LINE L2 -18 3295 3251 1997 145 6 6 chr2 185392113 185392424 -67864159 + AluSx SINE Alu 1 311 -1 425 236 140 25 chr2 185392880 185393037 -67863546 + MIR SINE MIR 27 201 -61 239 281 62 0 chr2 185393062 185393126 -67863457 - L2 LINE L2 -1 3271 3204 204 219 0 0 chr2 185394257 185394298 -67862285 + (TTCA)n Simple_repeat Simple_repeat 1 41 0 363 120 0 0 chr2 185394772 185394822 -67861761 + AluJ/FLAM SINE Alu 11 60 -242 255 129 16 65 chr2 185395141 185395203 -67861380 + FLAM_A SINE Alu 75 133 0 181 309 18 0 chr2 185395209 185395264 -67861319 - L2 LINE L2 -56 3257 3202 2107 105 6 59 chr2 185395945 185396268 -67860315 - AluSg1 SINE Alu -3 306 1 22 0 0 0 chr2 185397207 185397229 -67859354 + AT_rich Low_complexity Low_complexity 1 22 0 446 136 15 3 chr2 185398571 185398647 -67857936 - MSTD LTR MaLR 0 396 328 7711 68 30 3 chr2 185399029 185400010 -67856573 - LTR13 LTR ERVK 0 1007 1 298 269 9 56 chr2 185403810 185403918 -67852665 - MIR SINE MIR -50 212 110 415 259 191 5 chr2 185404665 185404854 -67851729 + MIR SINE MIR 3 226 -36 1658 177 48 59 chr2 185405114 185405571 -67851012 - MER67C LTR ERV1 -2 512 91 1234 159 10 5 chr2 185405572 185405780 -67850803 + AluJo SINE Alu 86 294 -18 560 138 11 0 chr2 185405780 185405867 -67850716 - MER67D LTR ERV1 -420 94 7 2218 105 0 7 chr2 185406690 185406986 -67849597 - AluSx SINE Alu -18 294 1 935 203 6 28 chr2 185407893 185408075 -67848508 - MER45A DNA AcHobo 0 178 1 286 225 92 0 chr2 185409104 185409199 -67847384 - MIR SINE MIR -13 195 80 217 300 17 0 chr2 185409315 185409375 -67847208 + MIR3 SINE MIR 133 193 -15 272 218 89 20 chr2 185410098 185410199 -67846384 + MER113 DNA MER1_type? 6 113 -408 682 223 0 0 chr2 185411242 185411363 -67845220 + FLAM_C SINE Alu 1 121 -12 21 0 0 0 chr2 185411363 185411384 -67845199 + AT_rich Low_complexity Low_complexity 1 21 0 1852 170 38 95 chr2 185412786 185413187 -67843396 - MER31A LTR ERV1 -8 477 109 2483 75 13 0 chr2 185413187 185413494 -67843089 + AluY SINE Alu 1 311 0 1852 170 38 95 chr2 185413494 185413598 -67842985 - MER31A LTR ERV1 -376 109 1 239 263 241 29 chr2 185413610 185413747 -67842836 - MLT1L LTR MaLR -11 604 439 469 227 121 0 chr2 185413868 185414009 -67842574 - MLT1L LTR MaLR -312 303 146 512 166 72 176 chr2 185414009 185414139 -67842444 - MER5B DNA MER1_type -2 176 71 2582 136 34 5 chr2 185414139 185414551 -67842032 + MSTA LTR MaLR 5 428 0 512 166 72 176 chr2 185414551 185414613 -67841970 - MER5B DNA MER1_type -107 71 4 1869 151 10 0 chr2 185414689 185414980 -67841603 + AluJb SINE Alu 1 294 -18 1588 187 82 12 chr2 185415244 185415707 -67840876 + MER34 LTR ERV1 1 542 0 412 315 5 43 chr2 185416118 185416302 -67840281 + MER5B DNA MER1_type 1 177 -1 5267 130 13 5 chr2 185417016 185417786 -67838797 - LTR39 LTR ERV1 0 783 8 267 261 15 100 chr2 185417796 185417926 -67838657 + MIR3 SINE MIR 9 127 -81 26 82 0 0 chr2 185420951 185421012 -67835571 + AT_rich Low_complexity Low_complexity 1 61 0 1828 159 7 23 chr2 185425715 185426017 -67830566 - AluJo SINE Alu -10 302 6 1841 165 3 3 chr2 185429868 185430153 -67826430 + AluJb SINE Alu 5 289 -23 207 0 0 0 chr2 185431880 185431903 -67824680 + (TA)n Simple_repeat Simple_repeat 2 24 0 2079 90 0 104 chr2 185431905 185432240 -67824343 - AluSx SINE Alu 0 312 13 228 196 49 78 chr2 185432297 185432399 -67824184 + L1ME4a LINE L1 5978 6076 -45 323 271 77 35 chr2 185433037 185433207 -67823376 - MER69A DNA AcHobo 0 177 1 189 0 0 0 chr2 185433830 185433851 -67822732 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 252 313 61 0 chr2 185435161 185435260 -67821323 + MIR3 SINE MIR 54 158 -50 2238 115 0 3 chr2 185435540 185435852 -67820731 - AluSq SINE Alu -2 311 1 382 102 0 20 chr2 185436061 185436134 -67820449 + Alu SINE Alu 1 52 -250 1343 179 84 9 chr2 185436406 185436929 -67819654 + L1MB8 LINE L1 5628 6146 -32 2180 133 0 3 chr2 185436956 185437258 -67819325 - AluSx SINE Alu -11 301 1 207 0 0 0 chr2 185437305 185437328 -67819255 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 1678 190 0 27 chr2 185437342 185437642 -67818941 - AluJb SINE Alu -20 292 1 28 0 0 0 chr2 185438340 185438368 -67818215 + AT_rich Low_complexity Low_complexity 1 28 0 225 240 0 0 chr2 185439182 185439232 -67817351 + MIR SINE MIR 105 154 -108 264 148 74 0 chr2 185439324 185439378 -67817205 - MER103 DNA DNA -106 60 3 23 54 0 0 chr2 185439378 185439415 -67817168 + AT_rich Low_complexity Low_complexity 1 37 0 27 0 0 0 chr2 185442339 185442366 -67814217 + AT_rich Low_complexity Low_complexity 1 27 0 985 100 19 0 chr2 185442640 185442800 -67813783 + (GAAA)n Simple_repeat Simple_repeat 2 164 0 240 301 0 0 chr2 185442905 185443008 -67813575 + G-rich Low_complexity Low_complexity 1 103 0 * 346 189 28 56 chr2 185442941 185443121 -67813462 + (TGGG)n Simple_repeat Simple_repeat 1 175 0 275 307 0 15 chr2 185443091 185443225 -67813358 + GA-rich Low_complexity Low_complexity 1 132 0 * 205 268 0 0 chr2 185443420 185443461 -67813122 + polypurine Low_complexity Low_complexity 1 41 0 2189 125 3 6 chr2 185443930 185444241 -67812342 - AluSq SINE Alu -3 310 1 383 198 25 25 chr2 185444654 185444811 -67811772 + GA-rich Low_complexity Low_complexity 4 160 0 226 150 38 25 chr2 185445507 185445587 -67810996 + CT-rich Low_complexity Low_complexity 1 81 0 208 345 18 50 chr2 185446102 185446322 -67810261 + L2 LINE L2 2656 2868 -446 376 227 13 0 chr2 185446556 185446631 -67809952 + L2 LINE L2 3197 3272 0 2269 131 36 6 chr2 185446723 185447060 -67809523 - MER7A DNA MER2_type 0 346 2 1156 148 0 16 chr2 185447513 185447695 -67808888 + FRAM SINE Alu 1 176 0 249 186 17 34 chr2 185448345 185448404 -67808179 + GA-rich Low_complexity Low_complexity 1 58 0 372 240 31 31 chr2 185448404 185448533 -67808050 + MLT1-int LTR MaLR 147 275 -1096 1870 150 10 7 chr2 185448680 185448973 -67807610 - AluSx SINE Alu -10 302 9 312 273 164 67 chr2 185449161 185449356 -67807227 + HAL1 LINE L1 85 260 -2247 1944 168 127 26 chr2 185449356 185449780 -67806803 - MLT1C LTR MaLR 0 467 1 312 273 164 67 chr2 185449780 185449925 -67806658 + HAL1 LINE L1 260 458 -2049 579 291 44 92 chr2 185450003 185450457 -67806126 + HAL1 LINE L1 597 1028 -1479 250 266 188 22 chr2 185450735 185450964 -67805619 + L2 LINE L2 2826 3092 -180 249 254 28 0 chr2 185451521 185451592 -67804991 + GA-rich Low_complexity Low_complexity 2 74 0 200 211 26 79 chr2 185451951 185452027 -67804556 + MIR SINE MIR 110 181 -81 527 261 131 9 chr2 185452030 185452252 -67804331 - MIR SINE MIR -4 258 10 201 231 0 0 chr2 185452446 185452485 -67804098 - MIR SINE MIR -132 76 38 238 301 0 21 chr2 185453580 185453673 -67802910 + (TA)n Simple_repeat Simple_repeat 2 92 0 1337 282 43 43 chr2 185453674 185454331 -67802252 - L1MC4a LINE L1 -1895 5913 5257 403 340 87 4 chr2 185454386 185454639 -67801944 - L1MC4a LINE L1 -1214 4932 4659 1752 160 32 4 chr2 185455097 185455378 -67801205 - AluJo SINE Alu -23 289 1 374 337 58 24 chr2 185456626 185456831 -67799752 + MIR SINE MIR 22 233 -29 281 211 49 148 chr2 185457683 185457719 -67798864 - MLT1J LTR MaLR -123 388 350 1918 144 6 35 chr2 185457719 185458038 -67798545 + AluSx SINE Alu 1 310 -2 281 211 49 148 chr2 185458038 185458143 -67798440 - MLT1J LTR MaLR -161 350 261 2469 132 11 30 chr2 185458143 185458514 -67798069 - THE1B LTR MaLR 0 364 1 5268 106 12 17 chr2 185458514 185459266 -67797317 - THE1B-int LTR MaLR 0 1580 833 366 209 0 0 chr2 185459382 185459511 -67797072 + G-rich Low_complexity Low_complexity 1 129 0 11103 105 10 11 chr2 185459516 185461081 -67795502 - THE1B-int LTR MaLR -17 1563 1 2386 113 5 88 chr2 185461081 185461478 -67795105 - THE1B LTR MaLR 0 364 1 561 245 137 29 chr2 185462134 185462338 -67794245 + MIR SINE MIR 5 230 -32 22 0 0 0 chr2 185462356 185462378 -67794205 + AT_rich Low_complexity Low_complexity 1 22 0 773 289 58 56 chr2 185462972 185463435 -67793148 - L2 LINE L2 -507 2807 2344 192 398 55 31 chr2 185464742 185464870 -67791713 - L2 LINE L2 -26 3246 3116 199 0 0 61 chr2 185464906 185464939 -67791644 + (CAAAA)n Simple_repeat Simple_repeat 1 31 0 3473 240 36 19 chr2 185464940 185465893 -67790690 + L1MEc LINE L1 98 1066 -5330 2370 82 0 16 chr2 185465902 185466207 -67790376 + AluSc SINE Alu 1 300 -9 527 205 0 16 chr2 185466525 185466647 -67789936 - MER20B DNA MER1_type 0 783 664 1036 278 59 33 chr2 185467037 185467590 -67788993 - L1ME3 LINE L1 -306 5856 5201 24 77 0 0 chr2 185467612 185467664 -67788919 + AT_rich Low_complexity Low_complexity 1 52 0 699 272 47 49 chr2 185467689 185468075 -67788508 - L1ME3 LINE L1 -1112 5034 4650 446 217 50 8 chr2 185468079 185468199 -67788384 - MER20B DNA MER1_type -114 669 545 311 213 16 0 chr2 185468195 185468256 -67788327 - MER20B DNA MER1_type -716 67 6 * 2191 109 0 10 chr2 185468366 185468668 -67787915 - AluSq SINE Alu -10 303 5 556 173 121 46 chr2 185469599 185469772 -67786811 + MER53 DNA DNA 1 186 -3 812 239 57 11 chr2 185469918 185470182 -67786401 + L1MEc LINE L1 791 1066 -5330 2460 63 7 0 chr2 185470191 185470490 -67786093 + AluY SINE Alu 1 301 -10 348 245 0 43 chr2 185470491 185470585 -67785998 + L1MC4 LINE L1 6614 6703 -1339 312 274 48 0 chr2 185470515 185470599 -67785984 - L1MC4 LINE L1 -1339 6703 6616 * 498 237 204 7 chr2 185470600 185470908 -67785675 + L1MEc LINE L1 1067 1435 -4961 620 313 43 5 chr2 185471200 185471408 -67785175 + MIR SINE MIR 34 249 -13 1100 157 147 0 chr2 185471626 185471817 -67784766 + MER20B DNA MER1_type 1 219 0 412 289 77 41 chr2 185471818 185472012 -67784571 + MIR SINE MIR 57 257 -5 992 248 88 15 chr2 185472395 185472738 -67783845 + L1MC4a LINE L1 5575 5942 -1866 621 324 13 25 chr2 185473271 185473509 -67783074 + L3 LINE CR1 1317 1551 -26 2233 77 7 3 chr2 185473800 185474110 -67782473 + AluY SINE Alu 1 311 0 1460 203 7 3 chr2 185476523 185476814 -67779769 + AluSx SINE Alu 10 301 -11 4723 163 53 35 chr2 185476883 185477843 -67778740 - L1MB8 LINE L1 -32 6146 5164 1946 119 22 0 chr2 185477843 185478152 -67778431 - AluSx SINE Alu 0 315 1 4723 163 53 35 chr2 185478152 185478480 -67778103 - L1MB8 LINE L1 -1014 5164 4843 325 378 24 0 chr2 185478606 185478733 -67777850 + L2 LINE L2 3119 3248 -24 21 71 0 0 chr2 185480831 185480873 -67775710 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr2 185482517 185482538 -67774045 + AT_rich Low_complexity Low_complexity 1 21 0 401 204 9 62 chr2 185483261 185483374 -67773209 + MLT1I LTR MaLR 303 409 0 619 243 311 7 chr2 185484684 185484989 -67771594 + MLT1I LTR MaLR 3 400 -9 507 275 42 7 chr2 185485044 185485186 -67771397 + MIR SINE MIR 6 152 -110 923 235 123 82 chr2 185485189 185485628 -67770955 - MLT1C LTR MaLR -2 465 9 24 32 0 0 chr2 185485982 185486013 -67770570 + AT_rich Low_complexity Low_complexity 1 31 0 505 229 55 85 chr2 185487674 185487875 -67768708 - MIR SINE MIR -12 250 56 520 252 35 14 chr2 185488202 185488345 -67768238 - MIR SINE MIR -94 168 23 3336 200 67 7 chr2 185488805 185489556 -67767027 - MER97a DNA MER1_type? -44 850 55 298 309 106 0 chr2 185490154 185490277 -67766306 + L1MC2 LINE L1 5748 5883 -461 27 0 0 0 chr2 185492464 185492491 -67764092 + GC_rich Low_complexity Low_complexity 1 27 0 198 71 0 0 chr2 185492595 185492623 -67763960 + (T)n Simple_repeat Simple_repeat 1 28 0 189 0 0 0 chr2 185495349 185495370 -67761213 + (T)n Simple_repeat Simple_repeat 1 21 0 543 316 83 9 chr2 185496982 185497200 -67759383 + MIR SINE MIR 13 246 -16 4967 130 72 10 chr2 185497201 185498056 -67758527 + MER4D LTR ERV1 1 664 0 410 248 45 23 chr2 185498325 185498458 -67758125 - MER103 DNA DNA -9 157 22 1458 162 51 13 chr2 185499050 185499341 -67757242 + MER61B LTR ERV1 1 395 -30 440 226 44 44 chr2 185499396 185499533 -67757050 + MIR SINE MIR 13 149 -113 213 306 16 0 chr2 185499724 185499786 -67756797 - L2 LINE L2 -9 3304 3242 872 165 18 6 chr2 185499893 185500063 -67756520 + MER96B DNA MER1_type? 8 179 -238 672 282 5 20 chr2 185500167 185500369 -67756214 + MIR SINE MIR 63 261 -1 310 222 14 0 chr2 185500373 185500445 -67756138 - MIR SINE MIR -142 120 48 610 211 24 8 chr2 185500636 185500759 -67755824 + L2 LINE L2 3189 3313 0 2054 86 9 58 chr2 185501131 185501456 -67755127 - AluSp SINE Alu -4 309 1 1835 182 0 0 chr2 185501875 185502182 -67754401 + AluJb SINE Alu 1 307 -5 2228 119 0 22 chr2 185502288 185502607 -67753976 - AluSq SINE Alu -1 312 1 666 272 77 26 chr2 185502984 185503275 -67753308 - L1ME3A LINE L1 -230 5940 5631 198 71 0 0 chr2 185503275 185503303 -67753280 + (TATATG)n Simple_repeat Simple_repeat 5 32 0 666 272 77 26 chr2 185503303 185503323 -67753260 - L1ME3A LINE L1 -539 5631 5613 459 235 38 38 chr2 185503349 185503481 -67753102 - MIR3 SINE MIR -2 206 75 438 241 36 9 chr2 185503492 185503604 -67752979 - L1MC4a LINE L1 -677 7131 7017 2447 81 3 0 chr2 185504665 185504972 -67751611 - AluSp SINE Alu -5 308 1 396 263 61 9 chr2 185505557 185505671 -67750912 + L2 LINE L2 3137 3256 -16 187 175 25 0 chr2 185506004 185506044 -67750539 + L2 LINE L2 3232 3272 0 338 258 52 10 chr2 185506467 185506564 -67750019 + MIR SINE MIR 85 185 -77 319 275 33 25 chr2 185506561 185506681 -67749902 - L2 LINE L2 -4 3309 3189 * 554 261 139 35 chr2 185507146 185507273 -67749310 + MIR SINE MIR 9 121 -141 2712 123 52 14 chr2 185507273 185507694 -67748889 + LTR23 LTR ERV1 1 437 0 554 261 139 35 chr2 185507694 185507796 -67748787 + MIR SINE MIR 121 262 0 276 256 16 66 chr2 185508001 185508122 -67748461 - MIR SINE MIR -41 221 107 300 309 24 8 chr2 185509054 185509177 -67747406 + LTR16C LTR ERVL 352 476 -15 390 293 108 24 chr2 185509303 185509470 -67747113 + MIR3 SINE MIR 4 184 -24 454 231 65 0 chr2 185510129 185510237 -67746346 - MIR SINE MIR -95 167 53 315 167 13 39 chr2 185510268 185510346 -67746237 - HAL1 LINE L1 -2 2505 2430 864 239 54 46 chr2 185510349 185510722 -67745861 - HAL1 LINE L1 -1357 1150 775 607 119 147 96 chr2 185510728 185510778 -67745805 - MER53 DNA DNA -3 186 140 1309 115 0 0 chr2 185510778 185510970 -67745613 - L1MA4A LINE L1 -7 6296 6105 607 119 147 96 chr2 185510970 185511096 -67745487 - MER53 DNA DNA -49 140 1 349 284 104 20 chr2 185511176 185511377 -67745206 - HAL1 LINE L1 -1955 552 335 232 360 77 26 chr2 185511552 185511785 -67744798 - L2 LINE L2 -337 2977 2733 1020 196 48 0 chr2 185513489 185513698 -67742885 + MER20 DNA MER1_type 1 219 0 2062 172 23 9 chr2 185514655 185514998 -67741585 - MER7A DNA MER2_type 0 346 1 243 242 81 0 chr2 185515263 185515325 -67741258 + MIR SINE MIR 96 162 -100 183 80 0 0 chr2 185515907 185515932 -67740651 + (TAA)n Simple_repeat Simple_repeat 1 25 0 216 373 87 24 chr2 185516997 185517123 -67739460 - L2 LINE L2 -27 3245 3112 338 311 126 32 chr2 185517429 185517619 -67738964 + MIR SINE MIR 28 235 -27 935 118 0 0 chr2 185517791 185517918 -67738665 + AluSg/x SINE Alu 169 295 -15 180 77 0 0 chr2 185518356 185518382 -67738201 + (TATAA)n Simple_repeat Simple_repeat 4 29 0 21 0 0 0 chr2 185518462 185518483 -67738100 + AT_rich Low_complexity Low_complexity 1 21 0 191 175 0 25 chr2 185518651 185518691 -67737892 + MIR SINE MIR 218 256 -6 590 275 80 0 chr2 185518798 185518998 -67737585 - MIR SINE MIR 0 262 47 265 311 123 0 chr2 185519705 185519811 -67736772 - L2 LINE L2 -2 3270 3152 21 0 0 0 chr2 185520161 185520182 -67736401 + AT_rich Low_complexity Low_complexity 1 21 0 487 272 19 6 chr2 185520274 185520436 -67736147 + MER103 DNA DNA 2 165 -1 2185 111 3 3 chr2 185520439 185520728 -67735855 - AluSg SINE Alu -21 289 1 212 350 41 21 chr2 185521933 185522030 -67734553 + L2 LINE L2 3149 3247 -25 471 273 99 6 chr2 185522679 185522840 -67733743 + MIR SINE MIR 3 178 -84 3237 87 35 43 chr2 185523737 185524229 -67732354 + L1PA14 LINE L1 5674 6161 0 193 239 76 76 chr2 185524338 185524430 -67732153 - L2 LINE L2 -1 3271 3180 214 306 64 81 chr2 185524572 185524869 -67731714 - L2 LINE L2 -337 2977 2686 570 331 117 31 chr2 185525064 185526459 -67730124 - L2 LINE L2 -966 2348 835 258 276 0 0 chr2 185526633 185526691 -67729892 + MIR SINE MIR 38 95 -113 2113 128 7 0 chr2 185528597 185528894 -67727689 - AluSx SINE Alu -13 299 1 1983 129 4 0 chr2 185529028 185529332 -67727251 + AluSx SINE Alu 1 305 0 331 251 53 123 chr2 185529393 185529567 -67727016 - HAL1 LINE L1 0 2507 2351 2631 64 0 0 chr2 185529567 185529878 -67726705 - AluY SINE Alu 0 311 1 331 251 53 123 chr2 185529878 185529930 -67726653 - HAL1 LINE L1 -156 2351 2297 874 240 27 9 chr2 185529948 185530169 -67726414 - MIR SINE MIR -25 237 13 1794 242 108 63 chr2 185530244 185531206 -67725377 - HAL1 LINE L1 -366 2141 1137 953 289 158 32 chr2 185531210 185531930 -67724653 - HAL1 LINE L1 -1423 1084 274 21 36 0 0 chr2 185533060 185533088 -67723495 + AT_rich Low_complexity Low_complexity 1 28 0 920 235 101 13 chr2 185533700 185533938 -67722645 - MIR SINE MIR 0 262 4 313 254 314 0 chr2 185534178 185534347 -67722236 + L1ME4a LINE L1 5878 6099 -22 237 215 204 21 chr2 185534474 185534567 -67722016 - L2 LINE L2 0 3313 3204 26 64 0 0 chr2 185536633 185536680 -67719903 + AT_rich Low_complexity Low_complexity 1 47 0 22 0 0 0 chr2 185537251 185537273 -67719310 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr2 185538625 185538648 -67717935 + AT_rich Low_complexity Low_complexity 1 23 0 212 315 0 14 chr2 185539250 185539323 -67717260 - L2 LINE L2 0 3313 3242 180 333 0 0 chr2 185541912 185541969 -67714614 - L2 LINE L2 -8 3264 3208 197 347 67 71 chr2 185542011 185542250 -67714333 - L2 LINE L2 -73 3199 2962 252 291 9 55 chr2 185543467 185543577 -67713006 - MIR SINE MIR -70 192 88 2189 240 84 14 chr2 185544788 185545429 -67711154 - HAL1 LINE L1 -484 2023 1338 402 189 83 123 chr2 185545434 185545662 -67710921 - L1M1 LINE L1 -4140 3425 3207 2127 64 0 0 chr2 185545668 185545919 -67710664 - L1PA5 LINE L1 -6 6148 5898 298 218 102 124 chr2 185545919 185546401 -67710182 - HAL1 LINE L1 -1159 1348 878 2121 129 37 6 chr2 185546421 185546770 -67709813 - L1MB2 LINE L1 -59 6112 5753 2134 263 151 19 chr2 185546834 185547610 -67708973 - HAL1 LINE L1 -1628 879 2 644 292 54 25 chr2 185549354 185549594 -67706989 - MIR SINE MIR -8 254 8 765 125 0 36 chr2 185549990 185550102 -67706481 + FAM SINE Alu 60 167 -18 349 316 68 21 chr2 185550194 185550384 -67706199 + MIR SINE MIR 49 247 -15 259 348 97 19 chr2 185550552 185550707 -67705876 - L2 LINE L2 0 3272 3106 2058 103 39 39 chr2 185551815 185552125 -67704458 + AluSx SINE Alu 1 310 -2 2223 96 3 0 chr2 185552544 185552872 -67703711 + AluSp SINE Alu 1 329 0 2038 98 54 0 chr2 185552882 185553006 -67703577 + AluY SINE Alu 1 117 -194 240 35 0 0 chr2 185553006 185553035 -67703548 + (CA)n Simple_repeat Simple_repeat 2 30 0 2038 98 54 0 chr2 185553035 185553187 -67703396 + AluY SINE Alu 117 292 -19 342 256 0 152 chr2 185553389 185553514 -67703069 + L2 LINE L2 3167 3272 0 342 256 0 152 chr2 185554024 185554149 -67702434 + L2 LINE L2 3167 3272 0 797 260 31 51 chr2 185556621 185556875 -67699708 - MIR SINE MIR -12 250 2 318 316 192 5 chr2 185557121 185557314 -67699269 + MIR SINE MIR 20 248 -14 2093 149 16 35 chr2 185557332 185557702 -67698881 - MLT1B LTR MaLR -27 363 1 1650 161 41 17 chr2 185557982 185558273 -67698310 + AluJo SINE Alu 3 300 -12 312 219 0 16 chr2 185558738 185558802 -67697781 - L2 LINE L2 0 3272 3210 187 301 157 0 chr2 185558853 185558936 -67697647 + L2 LINE L2 3169 3264 -8 273 211 105 21 chr2 185560908 185561003 -67695580 + MLT1K LTR MaLR 61 163 -386 * 539 241 56 88 chr2 185560971 185561220 -67695363 + MLT1I LTR MaLR 98 338 -71 478 290 42 16 chr2 185561600 185561771 -67694812 - MER5A DNA MER1_type 0 189 4 377 293 134 29 chr2 185562472 185562919 -67693664 + HAL1 LINE L1 1109 1602 -905 351 231 88 11 chr2 185564103 185564194 -67692389 - MIR SINE MIR -91 117 20 23 0 0 0 chr2 185565187 185565210 -67691373 + AT_rich Low_complexity Low_complexity 1 23 0 243 0 0 0 chr2 185565412 185565439 -67691144 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 760 203 0 42 chr2 185565441 185565584 -67690999 - FRAM SINE Alu -29 147 11 221 192 218 13 chr2 185565854 185565932 -67690651 + MIR SINE MIR 168 261 -1 341 226 32 0 chr2 185566912 185567005 -67689578 - MER103 DNA DNA -60 106 11 495 257 39 56 chr2 185567102 185567281 -67689302 - MER5B DNA MER1_type -2 176 1 454 256 89 21 chr2 185568028 185568219 -67688364 - MIR SINE MIR -10 252 49 534 299 51 0 chr2 185568554 185568711 -67687872 + MIR SINE MIR 11 175 -87 401 192 0 26 chr2 185568891 185568969 -67687614 - L2 LINE L2 -1 3312 3237 201 158 0 0 chr2 185570558 185570596 -67685987 + A-rich Low_complexity Low_complexity 1 38 0 305 276 45 85 chr2 185571836 185572035 -67684548 + MLT1K LTR MaLR 188 378 -210 586 212 88 7 chr2 185573317 185573454 -67683129 + MIR SINE MIR 109 256 -6 240 254 61 53 chr2 185573549 185573663 -67682920 + MIR SINE MIR 105 219 -43 2319 79 0 29 chr2 185574225 185574541 -67682042 + AluY SINE Alu 1 307 -4 321 26 0 0 chr2 185575392 185575430 -67681153 + (CA)n Simple_repeat Simple_repeat 1 38 0 227 292 21 31 chr2 185576353 185576449 -67680134 + MIR SINE MIR 110 204 -58 183 227 23 23 chr2 185576842 185576886 -67679697 - MIR SINE MIR -62 146 103 268 251 69 103 chr2 185580022 185580225 -67676358 - MER91A DNA MER1_type 0 196 1 204 40 0 0 chr2 185580408 185580433 -67676150 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 2104 130 74 34 chr2 185582298 185582621 -67673962 - MER1B DNA MER1_type 0 337 2 2201 113 0 7 chr2 185583268 185583561 -67673022 + AluSg SINE Alu 1 291 -19 33 66 0 0 chr2 185583840 185583901 -67672682 + AT_rich Low_complexity Low_complexity 1 61 0 464 216 32 24 chr2 185583997 185584122 -67672461 - L2 LINE L2 0 3313 3188 305 258 145 63 chr2 185584897 185584946 -67671637 - MIR3 SINE MIR -3 205 161 695 238 220 5 chr2 185584946 185585160 -67671423 + MIR SINE MIR 3 262 0 305 258 145 63 chr2 185585160 185585269 -67671314 - MIR3 SINE MIR -47 161 34 21 0 0 0 chr2 185585604 185585625 -67670958 + AT_rich Low_complexity Low_complexity 1 21 0 2104 129 10 3 chr2 185585824 185586127 -67670456 + AluJb SINE Alu 1 305 -7 545 315 60 26 chr2 185586346 185586613 -67669970 + MLT1I LTR MaLR 63 338 -71 1888 157 3 7 chr2 185587054 185587347 -67669236 - AluJo SINE Alu -20 292 1 324 234 149 50 chr2 185587375 185587516 -67669067 - MER103 DNA DNA -11 155 1 291 269 148 0 chr2 185587637 185587745 -67668838 + MIR SINE MIR 2 125 -137 1838 106 4 0 chr2 185587975 185588250 -67668333 + AluSx SINE Alu 37 312 0 181 266 128 32 chr2 185588519 185588613 -67667970 + MIR SINE MIR 160 262 0 21 0 0 0 chr2 185588925 185588946 -67667637 + AT_rich Low_complexity Low_complexity 1 21 0 1022 231 14 45 chr2 185589011 185589243 -67667340 - L1M4 LINE L1 -814 5332 5113 1716 159 69 0 chr2 185589243 185589519 -67667064 - AluJb SINE Alu -13 299 5 1022 231 14 45 chr2 185589519 185589645 -67666938 - L1M4 LINE L1 -1033 5113 4985 1135 282 140 20 chr2 185590525 185591009 -67665574 + L2 LINE L2 1821 2378 -936 2003 175 65 37 chr2 185591009 185591500 -67665083 + MLT1D LTR MaLR 1 505 0 1135 282 140 20 chr2 185591500 185591557 -67665026 + L2 LINE L2 2378 2427 -887 403 282 0 0 chr2 185591584 185591687 -67664896 + L2 LINE L2 2662 2764 -550 491 298 93 65 chr2 185591807 185592237 -67664346 + L2 LINE L2 2872 3313 0 685 136 136 18 chr2 185592379 185592548 -67664035 + MER53 DNA DNA 1 189 0 1765 177 5 58 chr2 185592733 185593031 -67663552 + MLT1B LTR MaLR 1 273 -117 2555 87 30 8 chr2 185593031 185593398 -67663185 + THE1C LTR MaLR 1 375 0 1765 177 5 58 chr2 185593398 185593511 -67663072 + MLT1B LTR MaLR 273 390 0 22 0 0 0 chr2 185595140 185595162 -67661421 + AT_rich Low_complexity Low_complexity 1 22 0 14596 115 22 10 chr2 185595237 185596470 -67660113 - Tigger1 DNA MER2_type 0 2418 1145 771 196 0 0 chr2 185596470 185596603 -67659980 - FLAM_A SINE Alu 0 133 1 14596 115 22 10 chr2 185596603 185597668 -67658915 - Tigger1 DNA MER2_type -1273 1145 94 2093 131 3 6 chr2 185597708 185598020 -67658563 - AluSx SINE Alu -1 311 1 390 196 33 0 chr2 185598463 185598555 -67658028 + MLT1H1 LTR MaLR 3 97 -458 372 232 7 22 chr2 185598948 185599086 -67657497 + CT-rich Low_complexity Low_complexity 4 139 0 276 30 0 0 chr2 185599141 185599174 -67657409 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 614 216 22 16 chr2 185599596 185599781 -67656802 + MER41B-int LTR ERV1 5605 5790 -541 466 158 55 89 chr2 185599801 185599947 -67656636 + MER41B-int LTR ERV1 5914 6054 -277 607 287 63 12 chr2 185600119 185600373 -67656210 + MER41B-int LTR ERV1 6409 6675 -1 2052 167 18 43 chr2 185600401 185600838 -67655745 + MER41B LTR ERV1 130 555 -80 293 177 13 101 chr2 185600885 185600964 -67655619 + MER66A LTR ERV1 395 466 -12 448 256 102 7 chr2 185601273 185601410 -67655173 + MIR SINE MIR 2 151 -111 420 291 0 15 chr2 185601424 185601558 -67655025 - MLT1I LTR MaLR -277 132 1 42734 36 2 1 chr2 185601614 185607767 -67648816 + L1PA3 LINE L1 1 6152 -3 339 293 99 22 chr2 185609080 185609302 -67647281 - L2 LINE L2 -129 3184 2946 222 279 125 7 chr2 185609330 185609466 -67647117 - L2 LINE L2 -461 2853 2702 387 166 26 119 chr2 185609475 185609626 -67646957 - L1ME3 LINE L1 -125 6037 5901 207 0 0 0 chr2 185609756 185609779 -67646804 + (A)n Simple_repeat Simple_repeat 1 23 0 1289 260 90 15 chr2 185610160 185610665 -67645918 - L2 LINE L2 -6 3307 2771 2156 109 0 3 chr2 185610985 185611303 -67645280 - AluSg SINE Alu 0 317 1 638 173 38 0 chr2 185611888 185612021 -67644562 - L1MA4A LINE L1 -8 6295 6158 369 0 0 0 chr2 185612154 185612195 -67644388 + (TA)n Simple_repeat Simple_repeat 2 42 0 2115 145 0 0 chr2 185612643 185612954 -67643629 - AluSx SINE Alu -1 311 1 487 328 78 11 chr2 185613530 185613710 -67642873 - MIR SINE MIR -4 258 67 295 348 0 37 chr2 185613826 185613961 -67642622 - MER5A DNA MER1_type -1 188 59 234 315 24 55 chr2 185613851 185613978 -67642605 + MER5A DNA MER1_type 37 159 -30 * 21 36 0 0 chr2 185614063 185614091 -67642492 + AT_rich Low_complexity Low_complexity 1 28 0 853 232 65 4 chr2 185614121 185614367 -67642216 + L1ME1 LINE L1 5897 6157 -9 324 347 76 7 chr2 185615543 185615687 -67640896 - L3 LINE CR1 -121 1456 1303 404 255 7 78 chr2 185615690 185615831 -67640752 - L2 LINE L2 0 3272 3142 1739 159 31 14 chr2 185616023 185616312 -67640271 - AluJo SINE Alu -18 294 1 432 0 0 0 chr2 185616322 185616370 -67640213 + (TAA)n Simple_repeat Simple_repeat 2 49 0 310 315 37 28 chr2 185617147 185617255 -67639328 - MIR SINE MIR -146 116 8 196 143 0 0 chr2 185617304 185617332 -67639251 + L2 LINE L2 3217 3244 -28 3684 224 96 48 chr2 185617332 185618180 -67638403 + HsTC2 DNA Tc2 8 814 -1084 1614 203 154 58 chr2 185618180 185618751 -67637832 + MLT1E2 LTR MaLR 1 626 0 3684 224 96 48 chr2 185618751 185619518 -67637065 + HsTC2 DNA Tc2 814 1897 -1 2254 86 7 3 chr2 185620156 185620448 -67636135 - AluSc SINE Alu -16 293 1 237 169 118 123 chr2 185620795 185620990 -67635593 + MER112 DNA MER1_type 67 260 0 550 326 114 34 chr2 185621334 185621745 -67634838 - LTR16B LTR ERVL -16 448 5 3592 164 30 11 chr2 185621871 185622598 -67633985 - L1MB7 LINE L1 -16 6168 5428 1869 154 7 0 chr2 185622618 185622898 -67633685 - AluSx SINE Alu -30 282 1 639 223 45 25 chr2 185623418 185623660 -67632923 - L1MA9 LINE L1 -38 6274 6028 284 315 28 45 chr2 185624217 185624395 -67632188 - L3b LINE CR1 -206 1377 1203 5087 160 13 14 chr2 185624546 185625814 -67630769 + L1MB2 LINE L1 4904 6170 -1 2331 90 3 3 chr2 185625817 185626116 -67630467 + AluSp SINE Alu 1 299 -14 1134 272 8 4 chr2 185626155 185626412 -67630171 - MIR SINE MIR 0 262 5 180 154 0 51 chr2 185626586 185626625 -67629958 + MIR3 SINE MIR 151 187 -21 551 352 20 5 chr2 185627240 185627436 -67629147 + MIR SINE MIR 56 254 -8 487 239 59 46 chr2 185628332 185628571 -67628012 - L1MC5 LINE L1 -71 7890 7649 267 219 48 29 chr2 185628609 185628714 -67627869 - L1MC5 LINE L1 -405 7556 7450 452 188 0 0 chr2 185628721 185628801 -67627782 - MER81 DNA DNA -5 109 30 538 180 55 8 chr2 185628804 185628932 -67627651 - L1MC5 LINE L1 -514 7447 7314 1007 101 17 17 chr2 185628942 185629120 -67627463 + (TTCC)n Simple_repeat Simple_repeat 1 178 0 409 182 20 0 chr2 185629121 185629220 -67627363 + CT-rich Low_complexity Low_complexity 3 103 0 1798 165 24 24 chr2 185629408 185629784 -67626799 - MLT1B LTR MaLR -6 384 9 333 297 60 32 chr2 185629869 185630054 -67626529 + MLT1L LTR MaLR 100 289 -326 2105 124 7 7 chr2 185630905 185631204 -67625379 + AluSg SINE Alu 1 299 -11 27 0 0 0 chr2 185631550 185631577 -67625006 + AT_rich Low_complexity Low_complexity 1 27 0 2126 138 0 3 chr2 185631589 185631885 -67624698 - AluSq SINE Alu -18 295 1 252 246 4 39 chr2 185632712 185632812 -67623771 - MIR SINE MIR -130 78 20 10615 182 22 14 chr2 185633402 185634822 -67621761 - L1PA16 LINE L1 -3 6163 4755 194 0 39 0 chr2 185634822 185634848 -67621735 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 2110 123 0 0 chr2 185634848 185635125 -67621458 - AluSx SINE Alu -35 277 1 10615 182 22 14 chr2 185635125 185635433 -67621150 - L1PA16 LINE L1 -1411 4755 4451 198 0 0 0 chr2 185635433 185635455 -67621128 + (TG)n Simple_repeat Simple_repeat 1 22 0 10615 182 22 14 chr2 185635455 185637121 -67619462 - L1PA16 LINE L1 -1715 4451 2742 870 161 23 0 chr2 185637121 185637283 -67619300 + L1MA8 LINE L1 6113 6290 -1 512 78 0 0 chr2 185637329 185637425 -67619158 - AluSp/q SINE Alu 0 317 222 3549 171 25 3 chr2 185639161 185639894 -67616689 - L1 LINE L1 -1215 4931 4183 8347 213 39 13 chr2 185639919 185642871 -67613712 - L1M4 LINE L1 -732 5950 2924 601 147 14 22 chr2 185642872 185643031 -67613552 - L1M4 LINE L1 -366 5818 5662 7369 34 13 6 chr2 185643032 185644314 -67612269 - L1PA5 LINE L1 -1 6153 4863 1158 203 8 12 chr2 185644315 185644696 -67611887 - L1M4 LINE L1 -3732 2912 2535 6548 214 40 23 chr2 185644698 185646333 -67610250 - L1M4 LINE L1 -4266 2380 600 432 0 0 0 chr2 185646333 185646381 -67610202 + (TG)n Simple_repeat Simple_repeat 2 49 0 6548 214 40 23 chr2 185646381 185646974 -67609609 - L1M4 LINE L1 -6046 600 18 340 281 22 0 chr2 185648335 185648424 -67608159 - L1MC4 LINE L1 -1337 6705 6615 314 330 0 0 chr2 185648407 185648495 -67608088 + L1MC4 LINE L1 6614 6701 -1341 * 316 258 21 21 chr2 185648444 185648537 -67608046 - L1MC4 LINE L1 -1336 6706 6614 180 152 0 0 chr2 185648537 185648570 -67608013 + (CA)n Simple_repeat Simple_repeat 2 34 0 315 224 79 0 chr2 185648573 185648649 -67607934 - L1MC4 LINE L1 -1347 6695 6614 292 368 103 5 chr2 185648945 185649130 -67607453 - MIR SINE MIR -3 259 57 1920 93 19 0 chr2 185650274 185650543 -67606040 + L1PA12 LINE L1 5895 6168 0 8024 36 1 0 chr2 185650738 185652483 -67604100 - L1PA5 LINE L1 -2 6152 4407 1190 37 0 0 chr2 185652485 185652619 -67603964 - AluY SINE Alu -20 291 158 34 0 0 0 chr2 185652639 185652673 -67603910 + AT_rich Low_complexity Low_complexity 1 34 0 1467 6 0 0 chr2 185652673 185652850 -67603733 - L1P LINE L1 -1731 4415 4239 219 36 0 0 chr2 185654273 185654301 -67602282 + (CA)n Simple_repeat Simple_repeat 2 29 0 559 339 145 31 chr2 185655028 185655483 -67601100 + L3 LINE CR1 998 1504 -73 543 318 112 6 chr2 185655488 185655658 -67600925 - MER91A DNA MER1_type -1 195 8 268 313 291 6 chr2 185655927 185656109 -67600474 - MIR SINE MIR -14 248 15 7480 53 13 8 chr2 185656213 185657741 -67598842 + SVA Other Other 1 1380 -6 26 0 0 0 chr2 185657741 185657767 -67598816 + AT_rich Low_complexity Low_complexity 1 26 0 1964 156 39 20 chr2 185657808 185658166 -67598417 + MLT1A1 LTR MaLR 1 365 0 221 222 14 69 chr2 185658499 185658571 -67598012 + L2 LINE L2 3152 3219 -94 380 359 36 0 chr2 185659046 185659213 -67597370 + MIR SINE MIR 90 262 0 305 302 69 73 chr2 185662666 185662898 -67593685 - L2 LINE L2 -402 2912 2682 194 200 75 0 chr2 185662945 185662985 -67593598 - MIR SINE MIR -88 174 132 1181 177 9 0 chr2 185663578 185663798 -67592785 + MER52-int LTR ERV1 6869 7090 -1 3599 152 40 9 chr2 185663811 185664709 -67591874 - MER61C-int LTR ERV1 -3599 2903 1407 872 72 0 0 chr2 185664709 185664820 -67591763 + AluY SINE Alu 198 308 -3 2535 142 9 5 chr2 185664822 185665263 -67591320 - MER61C-int LTR ERV1 -4464 2645 609 4885 92 26 120 chr2 185665264 185666790 -67589793 - pTR5 LTR ERV1 0 2606 1524 2370 200 12 12 chr2 185666779 185667275 -67589308 - MER61C-int LTR ERV1 -433 4784 4289 * 1207 188 42 89 chr2 185667272 185667775 -67588808 - MER61C-int LTR ERV1 -4764 453 181 * 513 153 20 168 chr2 185667853 185668049 -67588534 - MER61C-int LTR ERV1 -5033 184 18 2170 130 58 49 chr2 185668065 185668495 -67588088 - MER61C LTR ERV1 0 434 1 283 356 25 8 chr2 185668677 185668795 -67587788 - MIR SINE MIR -69 139 20 4148 154 7 16 chr2 185669115 185669649 -67586934 - MER50 LTR ERV1 -8 726 199 2747 110 82 0 chr2 185669649 185669681 -67586902 - MLT2A2 LTR ERVL -2 451 423 447 19 0 0 chr2 185669681 185669733 -67586850 + (TAGA)n Simple_repeat Simple_repeat 2 53 0 2747 110 82 0 chr2 185669733 185670117 -67586466 - MLT2A2 LTR ERVL -30 423 1 4148 154 7 16 chr2 185670117 185670315 -67586268 - MER50 LTR ERV1 -535 199 1 24 0 0 0 chr2 185671422 185671446 -67585137 + AT_rich Low_complexity Low_complexity 1 24 0 1530 196 143 106 chr2 185671571 185671634 -67584949 - MLT1E1 LTR MaLR 0 654 595 2226 92 0 3 chr2 185671634 185671966 -67584617 - AluSx SINE Alu 0 331 1 1530 196 143 106 chr2 185671966 185672532 -67584051 - MLT1E1 LTR MaLR -59 595 1 2160 109 0 33 chr2 185672532 185672834 -67583749 + AluSc SINE Alu 1 292 -17 1738 253 105 24 chr2 185673026 185673933 -67582650 + L2 LINE L2 2316 3305 -8 883 276 22 12 chr2 185677444 185677766 -67578817 - L1ME4a LINE L1 -242 5879 5555 190 355 66 41 chr2 185677830 185678027 -67578556 + L2 LINE L2 2067 2268 -1046 423 274 76 19 chr2 185678703 185678860 -67577723 + MIR SINE MIR 96 261 -1 338 347 65 0 chr2 185678993 185679117 -67577466 + L2 LINE L2 3137 3268 -4 305 194 0 16 chr2 185679168 185679230 -67577353 + L1ME3A LINE L1 3837 3897 -2249 2766 274 30 12 chr2 185679269 185680451 -67576132 + L1ME3A LINE L1 4212 5414 -740 411 222 20 0 chr2 185680451 185680550 -67576033 + MER94 DNA DNA 1 101 -33 768 244 60 28 chr2 185680561 185680844 -67575739 + L1ME3A LINE L1 5405 5696 -466 567 265 7 0 chr2 185680855 185681006 -67575577 + L1ME3A LINE L1 6019 6170 0 396 71 0 0 chr2 185682372 185682428 -67574155 + (GA)n Simple_repeat Simple_repeat 2 57 0 288 333 56 0 chr2 185682428 185682518 -67574065 - MIR SINE MIR -93 115 21 851 252 30 34 chr2 185683663 185683925 -67572658 - MIR SINE MIR 0 262 2 243 88 0 0 chr2 185683955 185683989 -67572594 + (TA)n Simple_repeat Simple_repeat 2 35 0 221 274 14 0 chr2 185684000 185684073 -67572510 + (TA)n Simple_repeat Simple_repeat 2 75 0 2220 105 24 0 chr2 185686060 185686355 -67570228 - AluSq SINE Alu -11 302 1 186 354 0 0 chr2 185686639 185686704 -67569879 + L2 LINE L2 3244 3308 -5 189 182 159 0 chr2 185686945 185686989 -67569594 + MIR SINE MIR 157 207 -55 255 265 30 8 chr2 185687959 185688091 -67568492 + (TA)n Simple_repeat Simple_repeat 1 135 0 2772 169 31 29 chr2 185689127 185689712 -67566871 - LTR60 LTR ERV1 0 586 1 22 35 0 0 chr2 185689726 185689755 -67566828 + AT_rich Low_complexity Low_complexity 1 29 0 385 235 108 0 chr2 185689954 185690056 -67566527 + MIR SINE MIR 40 152 -110 280 49 0 0 chr2 185690065 185690106 -67566477 + L1MA2 LINE L1 6261 6301 -3 248 267 13 13 chr2 185691808 185691883 -67564700 + L2 LINE L2 2568 2642 -672 2828 121 22 2 chr2 185693388 185693834 -67562749 - L1MB3 LINE L1 -11 6172 5718 2040 115 7 17 chr2 185694946 185695266 -67561317 + AluJb SINE Alu 2 318 0 979 264 47 13 chr2 185695376 185695762 -67560821 - L1MDb LINE L1 -4800 2322 1924 234 202 17 17 chr2 185695767 185695868 -67560715 - L1MDb LINE L1 -5195 1736 1636 383 268 61 33 chr2 185695892 185696105 -67560478 - L1MDb LINE L1 -4942 1481 1263 294 335 89 23 chr2 185697170 185697427 -67559156 - L2 LINE L2 -19 3294 3021 29 0 0 0 chr2 185697514 185697543 -67559040 + AT_rich Low_complexity Low_complexity 1 29 0 5054 162 34 7 chr2 185697543 185699286 -67557297 - L1PB4 LINE L1 -13 6143 3507 234 0 0 0 chr2 185699286 185699312 -67557271 + (TTG)n Simple_repeat Simple_repeat 2 27 0 5054 162 34 7 chr2 185699312 185699349 -67557234 - L1PB4 LINE L1 -2649 3507 3472 300 221 39 0 chr2 185699781 185699858 -67556725 - MLT1H1 LTR MaLR 0 555 476 2259 281 32 22 chr2 185699882 185700922 -67555661 - L1ME2 LINE L1 -127 6037 4990 334 204 146 10 chr2 185700956 185701059 -67555524 - L1ME2 LINE L1 -1231 4915 4799 656 318 59 28 chr2 185701186 185701472 -67555111 - L2 LINE L2 0 3313 3019 211 300 122 44 chr2 185701904 185701994 -67554589 + L2 LINE L2 3146 3242 -30 1058 187 53 19 chr2 185702126 185702335 -67554248 + AluJo SINE Alu 85 300 -12 305 323 188 11 chr2 185702392 185702578 -67554005 + MIR SINE MIR 41 259 -3 3269 154 37 2 chr2 185703034 185703606 -67552977 - L1MC3 LINE L1 0 7785 7194 371 231 11 11 chr2 185703609 185703700 -67552883 - MLT1F1 LTR MaLR -442 125 35 460 189 7 46 chr2 185703700 185703853 -67552730 - L1MC3 LINE L1 -688 7097 6951 390 338 79 25 chr2 185704366 185704644 -67551939 - L2 LINE L2 -342 2972 2680 309 284 157 13 chr2 185704727 185704956 -67551627 + MARNA DNA Mariner 305 566 -20 632 230 60 85 chr2 185705007 185705242 -67551341 - MIR SINE MIR -11 251 23 183 42 0 0 chr2 185706221 185706245 -67550338 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2296 71 3 14 chr2 185706248 185706544 -67550039 - AluY SINE Alu -18 293 1 211 315 120 32 chr2 185707434 185707650 -67548933 - MIR SINE MIR -16 246 12 2395 148 86 40 chr2 185707686 185708036 -67548547 - LTR48 LTR ERV1 0 787 454 1954 150 3 0 chr2 185708036 185708330 -67548253 - AluSx SINE Alu -17 295 1 2395 148 86 40 chr2 185708330 185708655 -67547928 - LTR48 LTR ERV1 -333 454 1 971 268 48 9 chr2 185709086 185709408 -67547175 + MLT1G1 LTR MaLR 1 289 -301 476 274 79 12 chr2 185709463 185709627 -67546956 - MIR SINE MIR -75 187 13 232 182 0 0 chr2 185709717 185709761 -67546822 - L2 LINE L2 0 3313 3270 717 231 134 8 chr2 185710058 185710296 -67546287 + LTR37B LTR ERV1 197 464 -4 294 286 59 25 chr2 185710298 185710417 -67546166 - L2 LINE L2 -8 3305 3183 596 204 125 69 chr2 185710993 185711209 -67545374 + MER77 LTR ERV1 45 272 -333 658 231 123 24 chr2 185711403 185711655 -67544928 + MER77 LTR ERV1 340 598 -7 2327 159 157 9 chr2 185711906 185712314 -67544269 + MLT2B1 LTR ERVL 1 484 -36 701 23 11 0 chr2 185712314 185712401 -67544182 + (TCTA)n Simple_repeat Simple_repeat 1 88 0 2327 159 157 9 chr2 185712401 185712445 -67544138 + MLT2B1 LTR ERVL 484 520 0 931 244 14 5 chr2 185712652 185712873 -67543710 + MER58A DNA MER1_type 1 223 -1 414 211 35 44 chr2 185713077 185713191 -67543392 - MER94 DNA DNA -10 124 12 2121 132 7 0 chr2 185713986 185714289 -67542294 + AluSx SINE Alu 1 305 -7 297 359 203 18 chr2 185714357 185714633 -67541950 - L2 LINE L2 0 3272 2946 851 291 74 43 chr2 185714634 185715080 -67541503 - LTR33 LTR ERVL -3 518 59 609 239 40 23 chr2 185715148 185715324 -67541259 + MER92C LTR ERV1 1 179 -375 354 100 67 0 chr2 185715399 185715459 -67541124 + MER92C LTR ERV1 491 554 0 210 335 98 38 chr2 185715744 185716010 -67540573 - L2 LINE L2 -665 2649 2368 228 35 0 0 chr2 185716194 185716223 -67540360 + (TG)n Simple_repeat Simple_repeat 2 30 0 974 197 28 31 chr2 185716262 185716475 -67540108 - MER8 DNA MER2_type -1 344 1 259 231 0 31 chr2 185717834 185717899 -67538684 + GA-rich Low_complexity Low_complexity 5 67 0 1692 170 37 0 chr2 185718480 185718775 -67537808 + AluJb SINE Alu 1 305 0 502 267 79 20 chr2 185718868 185719070 -67537513 + MLT1L LTR MaLR 379 592 -23 727 261 75 19 chr2 185719076 185719394 -67537189 + L1M4 LINE L1 4564 4899 -1247 560 263 48 57 chr2 185719662 185719890 -67536693 + LTR40c LTR ERVL 83 308 -157 1134 290 57 48 chr2 185719896 185720630 -67535953 - HAL1b LINE L1 -556 792 52 1009 185 0 2 chr2 185722429 185722676 -67533907 - AluJb SINE Alu -17 295 1 198 71 0 0 chr2 185722774 185722802 -67533781 + (TC)n Simple_repeat Simple_repeat 1 28 0 1435 197 0 8 chr2 185722805 185723059 -67533524 - AluJo SINE Alu -26 286 35 2516 73 3 0 chr2 185723180 185723482 -67533101 - AluSp SINE Alu -8 305 3 22 0 0 0 chr2 185724569 185724591 -67531992 + AT_rich Low_complexity Low_complexity 1 22 0 7824 13 1 0 chr2 185725677 185726578 -67530005 + L1PA2 LINE L1 5254 6155 0 273 311 14 0 chr2 185727374 185727448 -67529135 - L2 LINE L2 -1 3312 3238 396 298 105 35 chr2 185727636 185727807 -67528776 + MLT1K LTR MaLR 69 251 -337 666 196 54 65 chr2 185727916 185728084 -67528499 - FRAM SINE Alu 0 166 1 52 30 0 0 chr2 185728106 185728172 -67528411 + AT_rich Low_complexity Low_complexity 1 66 0 223 346 67 59 chr2 185728290 185728544 -67528039 - L2 LINE L2 -213 3059 2804 23 0 0 0 chr2 185728809 185728832 -67527751 + AT_rich Low_complexity Low_complexity 1 23 0 880 37 0 0 chr2 185728858 185728966 -67527617 - L1PA4 LINE L1 -3 6152 6045 728 265 68 48 chr2 185728978 185729272 -67527311 - L2 LINE L2 -949 2365 2066 2791 238 107 28 chr2 185729277 185730204 -67526379 + MER69B DNA AcHobo 117 1116 -110 2471 64 0 0 chr2 185730228 185730524 -67526059 - AluY SINE Alu -15 296 1 238 150 50 0 chr2 185730532 185730592 -67525991 - L1MB3 LINE L1 -1 6182 6120 770 289 25 23 chr2 185730625 185730992 -67525591 - L1ME LINE L1 -472 5649 5287 437 326 187 38 chr2 185731012 185731649 -67524934 - L1ME LINE L1 -913 5233 4502 366 336 74 8 chr2 185731629 185731880 -67524703 - L1ME LINE L1 -2137 4009 3745 * 2236 109 0 3 chr2 185731908 185732202 -67524381 + AluSg SINE Alu 1 293 -17 235 283 62 68 chr2 185732213 185732880 -67523703 - L1ME LINE L1 -2395 3751 3089 2221 74 0 55 chr2 185734229 185734540 -67522043 + AluY SINE Alu 1 294 -17 212 0 0 35 chr2 185734544 185734573 -67522010 + (TAAAA)n Simple_repeat Simple_repeat 1 28 0 211 376 0 0 chr2 185734681 185734774 -67521809 - L2 LINE L2 -995 2319 2227 4327 138 42 14 chr2 185735594 185736376 -67520207 + L1MC2 LINE L1 5540 6343 -1 547 237 8 0 chr2 185736387 185736505 -67520078 + L1MB7 LINE L1 5817 5935 -249 910 289 74 28 chr2 185737164 185737780 -67518803 + L1MC4a LINE L1 5268 5758 -363 235 234 47 0 chr2 185738011 185738075 -67518508 + MIR SINE MIR 187 253 -9 334 265 61 14 chr2 185738108 185738255 -67518328 + L1ME4a LINE L1 5645 5798 -323 723 217 72 18 chr2 185738272 185738493 -67518090 - L1MB8 LINE L1 -1 6177 5945 301 213 62 0 chr2 185738638 185738718 -67517865 + L1ME4a LINE L1 5964 6048 -73 2254 114 0 0 chr2 185739510 185739807 -67516776 - AluSx SINE Alu -15 297 1 28 0 0 0 chr2 185740083 185740111 -67516472 + AT_rich Low_complexity Low_complexity 1 28 0 180 176 0 0 chr2 185740941 185740975 -67515608 + (TA)n Simple_repeat Simple_repeat 2 35 0 264 30 0 0 chr2 185740975 185741008 -67515575 + (GA)n Simple_repeat Simple_repeat 2 34 0 350 326 70 17 chr2 185741404 185741760 -67514823 + L1MEc LINE L1 1424 1748 -861 358 337 91 33 chr2 185742212 185742455 -67514128 + L3b LINE CR1 1292 1548 -35 470 321 110 38 chr2 185743284 185743364 -67513219 + MIR SINE MIR 12 85 -177 1672 209 130 28 chr2 185743364 185743833 -67512750 - LTR40a LTR ERVL 0 519 3 470 321 110 38 chr2 185743833 185743961 -67512622 + MIR SINE MIR 85 235 -27 181 281 53 0 chr2 185744152 185744209 -67512374 - MIR SINE MIR -123 139 80 294 95 0 0 chr2 185745201 185745243 -67511340 + (CGTG)n Simple_repeat Simple_repeat 1 42 0 2259 97 7 3 chr2 185746555 185746853 -67509730 + AluSx SINE Alu 1 299 -13 791 276 97 52 chr2 185747932 185748570 -67508013 - L2 LINE L2 -91 3222 2567 604 249 231 7 chr2 185748653 185748934 -67507649 - L2 LINE L2 -1007 2307 1964 1211 188 188 31 chr2 185748958 185749347 -67507236 - LTR7 LTR ERV1 0 450 1 4171 117 64 17 chr2 185749877 185750537 -67506046 - LTR8 LTR ERV1 0 691 1 2243 121 0 6 chr2 185750623 185750937 -67505646 - AluSx SINE Alu 0 312 1 31 0 0 0 chr2 185751290 185751321 -67505262 + AT_rich Low_complexity Low_complexity 1 31 0 276 167 30 48 chr2 185751608 185751776 -67504807 + (TA)n Simple_repeat Simple_repeat 1 165 0 2027 130 9 25 chr2 185751973 185752288 -67504295 - AluSg SINE Alu 0 310 1 3756 109 39 5 chr2 185752376 185752990 -67503593 - LTR24C LTR ERV1 0 635 1 388 246 109 0 chr2 185753544 185753654 -67502929 - MIR3 SINE MIR -6 202 81 388 211 191 40 chr2 185754589 185754741 -67501842 - MIR SINE MIR -3 259 85 405 146 0 0 chr2 185755479 185755561 -67501022 - L1MA7 LINE L1 -6 6285 6204 1087 204 32 0 chr2 185755595 185755845 -67500738 - L1MA7 LINE L1 -232 6059 5802 2114 121 0 3 chr2 185755846 185756143 -67500440 - AluSx SINE Alu -16 296 1 352 52 103 0 chr2 185756281 185756339 -67500244 - L1PA13 LINE L1 0 6163 6100 1412 211 9 16 chr2 185756339 185756657 -67499926 - MER4D LTR ERV1 -39 864 549 1496 146 36 7 chr2 185756690 185756964 -67499619 - MER49 LTR ERV1 -641 282 1 674 198 0 0 chr2 185757982 185758139 -67498444 + FLAM_A SINE Alu 6 162 0 693 210 58 90 chr2 185759149 185759459 -67497124 - LTR37B LTR ERV1 -4 464 165 1084 227 4 9 chr2 185759514 185759739 -67496844 - MER58A DNA MER1_type 0 224 1 315 356 25 24 chr2 185759915 185760107 -67496476 + L1ME4a LINE L1 5393 5589 -532 857 75 0 98 chr2 185760107 185760240 -67496343 - AluSg/x SINE Alu -26 286 167 412 330 71 25 chr2 185760242 185760481 -67496102 + L1ME4a LINE L1 5582 5831 -290 12263 141 22 18 chr2 185760760 185762920 -67493663 - L1P LINE L1 -3966 2180 11 413 220 0 0 chr2 185762930 185763030 -67493553 - L1 LINE L1 -1490 4656 4557 557 126 54 0 chr2 185763034 185763145 -67493438 - L1PA14 LINE L1 -3 6158 6042 3126 173 32 25 chr2 185763250 185763268 -67493315 - L1 LINE L1 -1576 4570 4554 2319 114 6 6 chr2 185763268 185763628 -67492955 - L1PA14 LINE L1 -3 6158 5799 3126 173 32 25 chr2 185763628 185764321 -67492262 - L1 LINE L1 -1592 4554 3854 504 254 45 28 chr2 185765151 185765527 -67491056 + MLT1H1 LTR MaLR 38 502 -53 1012 172 0 0 chr2 185771870 185772033 -67484550 - FRAM SINE Alu -3 163 1 209 222 22 0 chr2 185772230 185772275 -67484308 + (CATA)n Simple_repeat Simple_repeat 3 48 0 416 385 6 0 chr2 185774910 185775084 -67481499 - MIR3 SINE MIR -6 202 28 21 0 0 0 chr2 185775779 185775800 -67480783 + AT_rich Low_complexity Low_complexity 1 21 0 253 234 0 0 chr2 185776815 185776862 -67479721 + MER5A DNA MER1_type 5 51 -138 2038 118 31 0 chr2 185777041 185777329 -67479254 + AluSx SINE Alu 1 297 -15 192 195 73 0 chr2 185777596 185777637 -67478946 + MIR SINE MIR 122 165 -97 27 49 0 0 chr2 185777993 185778034 -67478549 + AT_rich Low_complexity Low_complexity 1 41 0 44 56 0 0 chr2 185780034 185780106 -67476477 + AT_rich Low_complexity Low_complexity 1 72 0 25 0 0 0 chr2 185780154 185780179 -67476404 + AT_rich Low_complexity Low_complexity 1 25 0 1861 122 28 35 chr2 185780452 185780768 -67475815 + AluSx SINE Alu 1 314 0 341 302 37 13 chr2 185781273 185781395 -67475188 + MIR SINE MIR 20 147 -61 1922 150 6 13 chr2 185781859 185782173 -67474410 - AluSx SINE Alu 0 312 1 2231 94 0 44 chr2 185785553 185785872 -67470711 + AluSg SINE Alu 6 310 0 322 240 120 66 chr2 185786105 185786363 -67470220 + L1ME4a LINE L1 5636 5907 -214 1922 169 0 0 chr2 185786485 185786775 -67469808 + AluSx SINE Alu 1 290 -22 1464 56 5 10 chr2 185788104 185788299 -67468284 - L1PB1 LINE L1 0 6151 5958 445 193 101 9 chr2 185789368 185789477 -67467106 + LTR16A1 LTR ERVL 4 122 -335 413 278 90 0 chr2 185789511 185789644 -67466939 + MIR SINE MIR 113 257 -5 379 237 70 136 chr2 185790400 185790657 -67465926 + MIR SINE MIR 23 262 0 2142 138 3 0 chr2 185791510 185791815 -67464768 + AluSq SINE Alu 1 306 -7 22 0 0 0 chr2 185792337 185792359 -67464224 + AT_rich Low_complexity Low_complexity 1 22 0 346 278 104 0 chr2 185792700 185792815 -67463768 - L2 LINE L2 -4 3309 3183 2219 83 25 0 chr2 185794118 185794395 -67462188 - AluSc SINE Alu -25 284 1 225 301 143 15 chr2 185795624 185795757 -67460826 - MIR SINE MIR -54 208 59 488 294 72 43 chr2 185796138 185796373 -67460210 + MIR SINE MIR 20 261 -1 185 200 25 0 chr2 185797744 185797784 -67458799 + L2 LINE L2 3232 3272 0 387 0 0 0 chr2 185797792 185797835 -67458748 + (TA)n Simple_repeat Simple_repeat 2 44 0 25 51 0 0 chr2 185798043 185798082 -67458501 + AT_rich Low_complexity Low_complexity 1 39 0 276 279 158 11 chr2 185798169 185798359 -67458224 - L1ME4a LINE L1 -25 6096 5879 1329 138 0 0 chr2 185798387 185798597 -67457986 + MER2 DNA MER2_type 1 210 -135 900 269 47 19 chr2 185798763 185799123 -67457460 - L1ME4a LINE L1 -268 5853 5484 223 259 26 86 chr2 185799385 185799501 -67457082 + MER5A DNA MER1_type 6 114 -75 254 290 86 77 chr2 185800408 185800538 -67456045 + MIR SINE MIR 6 144 -64 29 0 0 0 chr2 185801655 185801684 -67454899 + AT_rich Low_complexity Low_complexity 1 29 0 253 152 0 136 chr2 185801973 185802039 -67454544 + MER5A DNA MER1_type 52 108 -81 2316 123 0 0 chr2 185802077 185802386 -67454197 + AluSq SINE Alu 1 309 -4 2161 115 3 0 chr2 185802517 185802804 -67453779 + AluSq SINE Alu 1 288 -25 2363 77 13 0 chr2 185802817 185803115 -67453468 + AluSq SINE Alu 3 304 -9 1060 145 0 0 chr2 185803116 185803275 -67453308 + AluSg/x SINE Alu 126 284 -28 21 0 0 0 chr2 185803305 185803326 -67453257 + AT_rich Low_complexity Low_complexity 1 21 0 218 314 105 52 chr2 185803430 185803659 -67452924 + L2 LINE L2 428 668 -2646 1590 279 117 43 chr2 185803664 185804556 -67452027 - L2 LINE L2 0 3313 2355 2592 56 0 0 chr2 185804556 185804860 -67451723 + AluY SINE Alu 1 304 -7 1590 279 117 43 chr2 185804860 185804917 -67451666 - L2 LINE L2 -958 2355 2304 491 318 38 14 chr2 185804974 185805185 -67451398 - MER102b DNA MER1_type 0 341 126 180 289 90 72 chr2 185806420 185806586 -67449997 - L2 LINE L2 -695 2619 2451 188 283 76 0 chr2 185806776 185806868 -67449715 - L2 LINE L2 -1042 2272 2174 217 256 141 50 chr2 185810410 185810531 -67446052 - L2 LINE L2 -392 2922 2791 1034 170 60 107 chr2 185810538 185810688 -67445895 + MLT1A1 LTR MaLR 1 156 -209 2368 127 36 3 chr2 185810688 185811051 -67445532 + THE1C LTR MaLR 1 375 0 1034 170 60 107 chr2 185811051 185811283 -67445300 + MLT1A1 LTR MaLR 156 365 0 274 243 135 0 chr2 185811605 185811679 -67444904 - L2 LINE L2 -993 2321 2238 231 192 135 0 chr2 185813284 185813336 -67443247 - MLT1A1 LTR MaLR -63 302 244 528 275 149 0 chr2 185813359 185813581 -67443002 - MLT1I LTR MaLR -56 353 99 248 169 31 46 chr2 185813904 185813969 -67442614 - L1ME LINE L1 -376 5786 5723 332 313 159 18 chr2 185814017 185814356 -67442227 - L1MEc LINE L1 -3874 2522 2136 1777 163 18 0 chr2 185814516 185814793 -67441790 + AluSx SINE Alu 1 282 -30 798 202 29 0 chr2 185814855 185815028 -67441555 + LTR32 LTR ERVL 17 194 -277 285 208 0 0 chr2 185815658 185815706 -67440877 + MER66B LTR ERV1 295 342 -144 279 94 0 47 chr2 185815706 185815770 -67440813 + (GAAA)n Simple_repeat Simple_repeat 1 61 0 431 99 37 12 chr2 185815975 185816056 -67440527 + L1MC1 LINE L1 5797 5879 -454 2814 161 34 63 chr2 185816490 185816589 -67439994 + L1MB3 LINE L1 5523 5623 -560 1524 133 160 11 chr2 185816589 185816852 -67439731 + AluSp SINE Alu 1 302 -1 2814 161 34 63 chr2 185816852 185817430 -67439153 + L1MB3 LINE L1 5623 6180 -3 844 138 0 36 chr2 185817818 185817956 -67438627 - FLAM_C SINE Alu 0 133 1 551 246 148 6 chr2 185818553 185818697 -67437886 - MER63A DNA MER1_type -1479 209 32 216 0 0 0 chr2 185818697 185818721 -67437862 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 551 246 148 6 chr2 185818721 185818759 -67437824 - MER63A DNA MER1_type -1656 32 1 583 212 8 45 chr2 185818834 185818966 -67437617 + MIR SINE MIR 42 168 -94 568 232 94 14 chr2 185819010 185819148 -67437435 + MER5A DNA MER1_type 5 153 -36 53 49 0 0 chr2 185819462 185819543 -67437040 + AT_rich Low_complexity Low_complexity 1 81 0 877 252 38 0 chr2 185819718 185819928 -67436655 - MER58A DNA MER1_type -6 218 1 741 144 23 40 chr2 185820345 185820518 -67436065 + L1MA8 LINE L1 6112 6281 -10 255 200 0 0 chr2 185820573 185820618 -67435965 + Tigger5 DNA MER2_type 11 55 -2268 950 214 39 8 chr2 185821223 185821457 -67435126 - L1M4 LINE L1 -1051 5095 4855 2014 90 39 0 chr2 185821457 185821768 -67434815 + L1MA2 LINE L1 5980 6302 -2 21 0 0 0 chr2 185821770 185821791 -67434792 + AT_rich Low_complexity Low_complexity 1 21 0 446 204 0 19 chr2 185822087 185822190 -67434393 - L1MD3 LINE L1 -8 7987 7887 279 207 195 85 chr2 185822449 185822613 -67433970 + L2 LINE L2 3118 3299 -14 198 103 0 0 chr2 185822614 185822643 -67433940 + (TGGA)n Simple_repeat Simple_repeat 1 29 0 1204 86 11 17 chr2 185823149 185823324 -67433259 + L1PA13 LINE L1 5984 6157 -6 676 175 6 6 chr2 185823435 185823606 -67432977 + GA-rich Low_complexity Low_complexity 3 173 0 748 269 74 10 chr2 185824244 185824639 -67431944 + L1MC4 LINE L1 6408 6919 -991 416 219 18 18 chr2 185824652 185824766 -67431817 + L1ME3A LINE L1 6031 6144 -26 239 242 0 0 chr2 185824766 185824832 -67431751 + L1MC4 LINE L1 6941 7006 -1036 682 219 62 39 chr2 185824952 185825208 -67431375 + L1MC5 LINE L1 6976 7237 -724 612 255 88 32 chr2 185825365 185825808 -67430775 + L1MC5 LINE L1 7292 7759 -202 2284 120 0 0 chr2 185825956 185826264 -67430319 + AluSg SINE Alu 1 308 -2 2427 75 0 13 chr2 185826322 185826630 -67429953 + AluSq SINE Alu 1 304 -9 183 42 0 0 chr2 185828098 185828122 -67428461 + (T)n Simple_repeat Simple_repeat 1 24 0 21 0 0 0 chr2 185828786 185828807 -67427776 + AT_rich Low_complexity Low_complexity 1 21 0 405 121 11 88 chr2 185829031 185829122 -67427461 - Charlie8 DNA MER1_type -2246 171 88 2237 115 3 0 chr2 185830695 185831000 -67425583 - AluSx SINE Alu -6 306 1 2448 144 38 16 chr2 185831233 185831656 -67424927 + MSTB1 LTR MaLR 1 432 0 2264 110 0 3 chr2 185832319 185832620 -67423963 + AluSq SINE Alu 1 300 -13 232 309 55 82 chr2 185833063 185833283 -67423300 + L2 LINE L2 2968 3181 -91 2459 82 6 0 chr2 185833308 185833639 -67422944 - L1PA10 LINE L1 -10 6158 5826 3382 108 20 20 chr2 185833643 185833959 -67422624 + L1P LINE L1 4787 5105 -1041 2244 113 10 3 chr2 185833959 185834261 -67422322 + AluSx SINE Alu 1 304 -8 3382 108 20 20 chr2 185834261 185834529 -67422054 + L1P LINE L1 5104 5371 -775 2255 100 3 16 chr2 185835043 185835354 -67421229 - AluSc SINE Alu -2 307 1 792 228 114 10 chr2 185838161 185838363 -67418220 - MER58A DNA MER1_type -1 223 1 2431 90 0 0 chr2 185838600 185838900 -67417683 + AluSx SINE Alu 1 300 -12 685 210 117 0 chr2 185839302 185839464 -67417119 + MIR SINE MIR 72 252 -10 338 315 92 58 chr2 185839536 185839737 -67416846 + L2 LINE L2 2148 2365 -949 2043 119 25 0 chr2 185839737 185840042 -67416541 - AluSq SINE Alu 0 313 2 338 315 92 58 chr2 185840042 185840131 -67416452 + L2 LINE L2 2365 2449 -865 257 351 18 18 chr2 185840157 185840271 -67416312 + L2 LINE L2 2636 2749 -565 679 260 66 6 chr2 185840657 185840838 -67415745 + MIR SINE MIR 16 207 -55 1792 146 39 0 chr2 185841684 185841964 -67414619 - AluJb SINE Alu -21 291 1 24 32 0 0 chr2 185843599 185843630 -67412953 + AT_rich Low_complexity Low_complexity 1 31 0 471 302 103 21 chr2 185844235 185844443 -67412140 + MIR SINE MIR 9 229 -33 675 259 134 18 chr2 185844704 185844928 -67411655 + MIR SINE MIR 13 262 0 200 371 34 0 chr2 185845481 185845570 -67411013 - L2 LINE L2 -24 3289 3198 977 187 87 35 chr2 185845748 185845978 -67410605 + L1ME3 LINE L1 5523 5764 -398 523 226 57 73 chr2 185845983 185846160 -67410423 + MER21B LTR ERV1 327 500 -363 965 241 142 14 chr2 185846537 185846881 -67409702 + L1ME3 LINE L1 5775 6162 0 2347 106 3 0 chr2 185846891 185847192 -67409391 + AluSq SINE Alu 1 302 -11 183 220 0 40 chr2 185847270 185847320 -67409263 - L2 LINE L2 -4 3309 3262 2392 104 0 0 chr2 185847891 185848199 -67408384 - AluSx SINE Alu -4 308 1 217 268 0 28 chr2 185849454 185849525 -67407058 + GA-rich Low_complexity Low_complexity 1 69 0 1399 145 76 65 chr2 185849762 185850052 -67406531 + AluJo SINE Alu 6 298 -14 303 28 0 0 chr2 185851096 185851132 -67405451 + (CA)n Simple_repeat Simple_repeat 2 37 0 448 275 56 45 chr2 185851272 185851450 -67405133 + MIR3 SINE MIR 16 195 -13 2078 132 3 0 chr2 185851453 185851742 -67404841 - AluSq SINE Alu -23 290 1 25 51 0 0 chr2 185852350 185852389 -67404194 + AT_rich Low_complexity Low_complexity 1 39 0 570 213 180 9 chr2 185853534 185853745 -67402838 - L1ME1 LINE L1 0 6166 5919 1982 105 56 0 chr2 185853760 185854075 -67402508 - AluSq SINE Alu 0 330 1 1585 226 58 73 chr2 185854239 185854514 -67402069 + L1MC5 LINE L1 6562 6840 -1121 498 75 0 0 chr2 185854514 185854581 -67402002 + (CATATA)n Simple_repeat Simple_repeat 6 72 0 1585 226 58 73 chr2 185854581 185854973 -67401610 + L1MC5 LINE L1 6840 7227 -734 679 230 87 70 chr2 185856076 185856363 -67400220 + L1ME2 LINE L1 5872 6163 -1 295 299 34 0 chr2 185856393 185856510 -67400073 + L1MC5 LINE L1 7793 7913 -48 2041 122 17 3 chr2 185856542 185856838 -67399745 + AluSx SINE Alu 1 300 -12 1590 185 24 17 chr2 185856854 185857152 -67399431 + AluJo SINE Alu 7 306 -6 318 324 18 9 chr2 185857155 185857266 -67399317 + MIR SINE MIR 41 152 -110 25 0 0 0 chr2 185857939 185857964 -67398619 + AT_rich Low_complexity Low_complexity 1 25 0 2624 84 18 63 chr2 185859397 185859602 -67396981 + THE1B LTR MaLR 1 183 -181 2165 125 0 13 chr2 185859602 185859915 -67396668 - AluSx SINE Alu -1 311 3 2624 84 18 63 chr2 185859915 185860090 -67396493 + THE1B LTR MaLR 183 364 0 534 186 168 36 chr2 185860321 185860452 -67396131 - MER53 DNA DNA 0 189 30 2692 126 74 20 chr2 185860452 185860520 -67396063 - MSTC LTR MaLR 0 428 365 2326 108 0 3 chr2 185860520 185860827 -67395756 - AluSg SINE Alu -4 306 1 2692 126 74 20 chr2 185860827 185861164 -67395419 - MSTC LTR MaLR -63 365 1 534 186 168 36 chr2 185861164 185861199 -67395384 - MER53 DNA DNA -159 30 1 2359 92 3 0 chr2 185861618 185861922 -67394661 + AluSq SINE Alu 1 305 -8 1081 213 19 5 chr2 185862473 185862684 -67393899 + MER58A DNA MER1_type 11 224 0 396 322 230 19 chr2 185864145 185864775 -67391808 - L2 LINE L2 -167 3105 2346 238 194 81 16 chr2 185864838 185864900 -67391683 + MIR SINE MIR 112 177 -85 237 286 0 0 chr2 185864957 185865013 -67391570 - L2 LINE L2 -975 2339 2284 411 279 111 50 chr2 185865437 185865699 -67390884 + L1ME4a LINE L1 5662 5956 -165 2046 133 0 16 chr2 185865699 185866016 -67390567 + AluSx SINE Alu 1 312 0 411 279 111 50 chr2 185866016 185866133 -67390450 + L1ME4a LINE L1 5956 6064 -57 215 319 14 0 chr2 185866772 185866844 -67389739 + MIR SINE MIR 67 139 -69 192 200 73 18 chr2 185867974 185868029 -67388554 - L2 LINE L2 0 3272 3215 206 258 91 0 chr2 185868255 185868321 -67388262 - L2 LINE L2 -850 2464 2393 336 261 25 101 chr2 185869075 185869264 -67387319 + MIR SINE MIR 30 203 -59 716 299 153 38 chr2 185870412 185870988 -67385595 - L2 LINE L2 -4 3309 2583 2347 92 3 0 chr2 185870988 185871291 -67385292 + AluSg SINE Alu 1 304 -6 716 299 153 38 chr2 185871291 185871597 -67384986 - L2 LINE L2 -730 2583 2314 39 80 0 0 chr2 185871897 185871985 -67384598 + AT_rich Low_complexity Low_complexity 1 88 0 1871 157 41 0 chr2 185872827 185873145 -67383438 - MER7A DNA MER2_type -14 332 4 2142 130 0 0 chr2 185873223 185873522 -67383061 + AluSx SINE Alu 1 299 -13 1657 91 0 0 chr2 185873527 185873737 -67382846 + AluSg SINE Alu 1 210 -100 1215 110 0 0 chr2 185874174 185874337 -67382246 - AluSg/x SINE Alu -18 294 132 1646 157 4 8 chr2 185874391 185874652 -67381931 - AluSx SINE Alu -50 262 3 950 148 0 0 chr2 185874690 185874839 -67381744 - L1MB3 LINE L1 -73 6110 5962 2258 78 0 7 chr2 185875012 185875293 -67381290 + AluY SINE Alu 1 279 -32 459 0 0 0 chr2 185875295 185875346 -67381237 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 1215 168 209 4 chr2 185875395 185875639 -67380944 - AluJo SINE Alu -18 294 1 402 161 216 31 chr2 185875656 185875818 -67380765 + Charlie7 DNA MER1_type 2421 2612 0 3500 164 37 3 chr2 185876118 185876686 -67379897 - MER44D DNA MER2_type -9 596 138 1218 183 29 0 chr2 185877111 185877319 -67379264 + MER20 DNA MER1_type 1 214 -5 367 102 34 0 chr2 185878929 185878988 -67377595 + L1PA16 LINE L1 6104 6164 -2 2348 110 0 0 chr2 185879218 185879571 -67377012 + AluY SINE Alu 2 354 0 298 301 63 42 chr2 185880038 185880181 -67376402 - MER5A DNA MER1_type -37 152 7 648 167 0 0 chr2 185880196 185880310 -67376273 + L1M4 LINE L1 5119 5232 -914 911 182 17 6 chr2 185880311 185880492 -67376091 + L1MD2 LINE L1 6175 6357 -2 228 35 0 0 chr2 185880495 185880524 -67376059 + (TC)n Simple_repeat Simple_repeat 1 29 0 333 323 127 13 chr2 185881044 185881202 -67375381 - MIR SINE MIR -1 261 86 188 139 83 0 chr2 185882292 185882328 -67374255 + MIR SINE MIR 123 161 -101 514 235 90 42 chr2 185882371 185882537 -67374046 - MIR SINE MIR -73 189 16 21 57 0 0 chr2 185882657 185882692 -67373891 + AT_rich Low_complexity Low_complexity 1 35 0 1337 170 32 12 chr2 185883018 185883084 -67373499 + AluJo SINE Alu 57 120 -192 180 0 0 0 chr2 185883084 185883104 -67373479 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 1337 170 32 12 chr2 185883104 185883284 -67373299 + AluJo SINE Alu 120 308 -4 3373 168 11 49 chr2 185883332 185883968 -67372615 + LTR9 LTR ERV1 1 612 0 384 279 79 55 chr2 185884645 185884935 -67371648 + MLT1J LTR MaLR 64 360 -151 772 161 90 13 chr2 185884960 185885059 -67371524 - MER5A DNA MER1_type -1 188 71 1678 199 0 16 chr2 185885059 185885375 -67371208 - AluJb SINE Alu -1 311 1 772 161 90 13 chr2 185885375 185885430 -67371153 - MER5A DNA MER1_type -118 71 22 598 206 8 0 chr2 185885466 185885592 -67370991 + MER3 DNA MER1_type 36 162 -47 1513 213 55 25 chr2 185885643 185886010 -67370573 + MSTD LTR MaLR 15 392 -4 1808 146 48 22 chr2 185886018 185886367 -67370216 + MER3 DNA MER1_type 2236 2597 -27 2363 90 0 0 chr2 185886367 185886667 -67369916 - AluY SINE Alu -11 300 1 1808 146 48 22 chr2 185886667 185886688 -67369895 + MER3 DNA MER1_type 2597 2616 -8 1176 291 67 36 chr2 185887180 185887854 -67368729 - L1ME3A LINE L1 -220 5950 5256 394 184 97 44 chr2 185887881 185887995 -67368588 - L1MC5 LINE L1 -100 7861 7742 307 265 50 90 chr2 185888020 185888300 -67368283 - L1ME3A LINE L1 -984 5162 4885 256 233 100 11 chr2 185888473 185888563 -67368020 + LTR33 LTR ERVL 20 117 -404 271 311 75 9 chr2 185888632 185888738 -67367845 + LTR33 LTR ERVL 88 200 -321 443 298 26 48 chr2 185888800 185888994 -67367589 + LTR33 LTR ERVL 298 488 -33 2391 131 28 17 chr2 185888994 185889354 -67367229 + THE1B LTR MaLR 1 364 0 443 298 26 48 chr2 185889354 185889387 -67367196 + LTR33 LTR ERVL 488 520 -1 270 81 0 0 chr2 185889641 185889678 -67366905 + (TTTTC)n Simple_repeat Simple_repeat 4 40 0 426 120 0 0 chr2 185889893 185889968 -67366615 + (GA)n Simple_repeat Simple_repeat 2 76 0 1757 192 0 0 chr2 185889972 185890263 -67366320 - AluJb SINE Alu -21 291 1 327 256 25 41 chr2 185891777 185891898 -67364685 + L1ME LINE L1 5633 5751 -370 22 35 0 0 chr2 185891998 185892027 -67364556 + AT_rich Low_complexity Low_complexity 1 29 0 2355 66 7 13 chr2 185892248 185892553 -67364030 - AluY SINE Alu -8 303 1 23 33 0 0 chr2 185893650 185893680 -67362903 + AT_rich Low_complexity Low_complexity 1 30 0 1672 170 0 31 chr2 185894310 185894599 -67361984 + AluJb SINE Alu 1 280 -32 549 303 51 26 chr2 185895486 185895720 -67360863 + MIR SINE MIR 11 250 -12 2195 127 0 0 chr2 185895988 185896295 -67360288 + AluSg SINE Alu 1 307 -3 23 0 0 0 chr2 185896502 185896525 -67360058 + AT_rich Low_complexity Low_complexity 1 23 0 311 244 37 0 chr2 185896826 185896908 -67359675 - L1MC4 LINE L1 -2 8040 7956 3832 133 67 12 chr2 185896925 185897505 -67359078 + LTR9 LTR ERV1 1 612 0 388 254 164 0 chr2 185897508 185897630 -67358953 - L1MC4 LINE L1 -332 7710 7569 1341 244 99 26 chr2 185897639 185898547 -67358036 - L1MC4 LINE L1 -2 8040 6949 207 114 0 0 chr2 185899779 185899814 -67356769 + (T)n Simple_repeat Simple_repeat 1 35 0 1284 174 88 101 chr2 185899862 185899947 -67356636 + MLT2C1 LTR ERVL 3 88 -309 1731 137 20 40 chr2 185899947 185900247 -67356336 - AluJo SINE Alu -16 296 3 1284 174 88 101 chr2 185900247 185900558 -67356025 + MLT2C1 LTR ERVL 88 394 -3 497 303 171 54 chr2 185900782 185901796 -67354787 - L2 LINE L2 -56 3216 2054 2094 110 10 3 chr2 185901806 185902098 -67354485 + AluSg SINE Alu 1 294 -16 1736 168 40 0 chr2 185903614 185903911 -67352672 - AluJo SINE Alu -3 309 1 270 0 0 0 chr2 185904061 185904091 -67352492 + (TG)n Simple_repeat Simple_repeat 2 31 0 1830 144 3 20 chr2 185904091 185904383 -67352200 - AluSx SINE Alu -23 289 3 1922 117 21 18 chr2 185904592 185904908 -67351675 + AluSx SINE Alu 1 317 0 2325 224 119 68 chr2 185905053 185906179 -67350404 + HAL1 LINE L1 615 1797 -710 528 116 0 0 chr2 185906196 185906282 -67350301 + (GGGGA)n Simple_repeat Simple_repeat 3 88 0 238 188 29 14 chr2 185906289 185906358 -67350225 + HAL1 LINE L1 1721 1790 -717 2293 106 3 6 chr2 185906598 185906909 -67349674 - AluSx SINE Alu -2 310 1 663 222 54 86 chr2 185907378 185907757 -67348826 + MLT1D LTR MaLR 31 390 0 690 133 0 33 chr2 185907869 185907989 -67348594 + FLAM_C SINE Alu 27 142 -1 2264 96 0 0 chr2 185907997 185908309 -67348274 + AluSx SINE Alu 1 312 0 260 294 110 28 chr2 185909769 185909878 -67346705 + MIR SINE MIR 29 146 -116 3449 219 97 31 chr2 185910236 185910588 -67345995 + L1MEc LINE L1 36 363 -6033 1971 142 10 3 chr2 185910588 185910898 -67345685 + AluSx SINE Alu 1 312 0 3449 219 97 31 chr2 185910898 185911564 -67345019 + L1MEc LINE L1 363 1121 -5275 659 198 0 0 chr2 185911569 185911670 -67344913 + FLAM_A SINE Alu 1 101 -41 2028 246 83 32 chr2 185911724 185912062 -67344521 + L1MEc LINE L1 1105 1424 -4972 2222 117 10 0 chr2 185912062 185912370 -67344213 - AluSx SINE Alu 0 312 2 2028 246 83 32 chr2 185912370 185912878 -67343705 + L1MEc LINE L1 1424 1994 -4402 250 122 0 0 chr2 185913236 185913277 -67343306 + MIR SINE MIR 102 142 -66 688 193 129 7 chr2 185913373 185913542 -67343041 + FAM SINE Alu 1 50 0 2275 82 3 0 chr2 185913818 185914123 -67342460 + AluY SINE Alu 1 306 0 2120 138 0 0 chr2 185914360 185914664 -67341919 + AluSx SINE Alu 1 304 -8 180 339 65 0 chr2 185915185 185915247 -67341336 - L2 LINE L2 -16 3256 3191 266 146 0 0 chr2 185916212 185916253 -67340330 + MIR SINE MIR 88 128 -134 541 143 26 0 chr2 185916253 185916370 -67340213 - AluSg/x SINE Alu 0 322 204 1775 96 26 0 chr2 185916376 185916606 -67339977 + AluSg SINE Alu 61 296 -14 1642 155 36 20 chr2 185917151 185917454 -67339129 + MER44D DNA MER2_type 32 609 0 826 281 78 5 chr2 185917698 185918052 -67338531 + L1ME3A LINE L1 5544 5879 -291 325 266 111 108 chr2 185920311 185920859 -67335724 + L1M2 LINE L1 652 1201 -5648 2062 102 12 58 chr2 185921871 185922196 -67334387 + AluSx SINE Alu 1 310 -2 187 246 53 18 chr2 185922596 185922653 -67333930 - L2 LINE L2 -2636 678 620 1578 229 84 118 chr2 185923268 185923839 -67332744 + MLT2E LTR ERVL 3 551 -77 2235 128 0 3 chr2 185923839 185924151 -67332432 - AluSx SINE Alu -1 311 1 1578 229 84 118 chr2 185924151 185924222 -67332361 + MLT2E LTR ERVL 551 623 -5 213 121 0 0 chr2 185924700 185924733 -67331850 + (T)n Simple_repeat Simple_repeat 1 33 0 1092 53 8 0 chr2 185924787 185924918 -67331665 + AluY SINE Alu 1 132 -179 1615 64 5 5 chr2 185924933 185925137 -67331446 + AluY SINE Alu 105 308 -3 1291 269 66 48 chr2 185925644 185926445 -67330138 - L2 LINE L2 -5 3308 2493 2017 116 7 0 chr2 185926504 185926779 -67329804 + AluSx SINE Alu 1 277 -35 180 0 0 0 chr2 185926802 185926822 -67329761 + (T)n Simple_repeat Simple_repeat 1 20 0 312 320 76 30 chr2 185927377 185927574 -67329009 + MIR SINE MIR 51 256 -6 222 261 139 43 chr2 185927741 185927856 -67328727 + L2 LINE L2 3179 3304 -9 3373 129 46 33 chr2 185927857 185928064 -67328519 - L1MA8 LINE L1 -1 6290 6087 207 0 0 0 chr2 185928064 185928087 -67328496 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2233 82 7 0 chr2 185928087 185928366 -67328217 - AluSx SINE Alu -27 285 5 3373 129 46 33 chr2 185928366 185928787 -67327796 - L1MA8 LINE L1 -203 6088 5653 716 197 8 0 chr2 185928796 185928923 -67327660 - FLAM_C SINE Alu -13 130 3 5683 146 26 9 chr2 185928924 185930254 -67326329 - L1MA8 LINE L1 -623 5668 4323 2376 92 3 3 chr2 185930254 185930560 -67326023 + AluSq SINE Alu 1 306 -7 823 280 53 34 chr2 185930571 185930835 -67325748 - MER115 DNA AcHobo -115 578 310 419 295 81 13 chr2 185930841 185930990 -67325593 - MER115 DNA AcHobo -509 184 26 2024 155 0 16 chr2 185931239 185931580 -67325003 - AluSx SINE Alu 0 336 1 1812 173 0 13 chr2 185932706 185933012 -67323571 + AluJb SINE Alu 1 302 -10 1162 152 14 28 chr2 185933043 185933254 -67323329 - MER3 DNA MER1_type -1 208 1 2218 121 3 3 chr2 185933283 185933596 -67322987 - AluSp SINE Alu 0 313 1 2079 117 3 0 chr2 185933629 185933759 -67322824 + AluSq SINE Alu 1 129 -183 5252 74 0 6 chr2 185933759 185934398 -67322185 + L1PA7 LINE L1 5520 6154 0 2079 117 3 0 chr2 185934398 185934578 -67322005 + AluSq SINE Alu 129 312 0 189 0 0 0 chr2 185934759 185934780 -67321803 + (TG)n Simple_repeat Simple_repeat 2 22 0 2033 113 18 0 chr2 185934781 185935056 -67321527 - AluSq SINE Alu -33 280 1 2478 83 0 3 chr2 185935376 185935690 -67320893 - AluSq SINE Alu 0 313 1 826 161 0 0 chr2 185935726 185935850 -67320733 - FLAM_C SINE Alu -17 126 3 1822 155 13 23 chr2 185936472 185936775 -67319808 - AluJb SINE Alu -12 300 1 1849 304 126 35 chr2 185936984 185938454 -67318129 + L2 LINE L2 943 2545 -769 211 211 0 0 chr2 185938501 185938539 -67318044 + GA-rich Low_complexity Low_complexity 3 40 0 2400 64 0 13 chr2 185939049 185939347 -67317236 - AluY SINE Alu -17 294 1 1952 174 0 3 chr2 185940007 185940318 -67316265 - AluJb SINE Alu -2 310 1 1966 247 24 19 chr2 185940416 185941338 -67315245 + L1M3c LINE L1 3 1381 -4760 2072 114 4 4 chr2 185941351 185941670 -67314913 + AluSx SINE Alu 1 319 0 4067 255 113 15 chr2 185941676 185942056 -67314527 + L1M3c LINE L1 1430 1772 -4438 1499 217 17 0 chr2 185942056 185942355 -67314228 + AluJo SINE Alu 1 304 -8 4067 255 113 15 chr2 185942355 185942695 -67313888 + L1M3c LINE L1 1772 2077 -4133 1943 132 3 3 chr2 185942695 185942983 -67313600 - AluSq SINE Alu -25 288 1 4067 255 113 15 chr2 185942983 185944397 -67312186 + L1M3c LINE L1 2077 3819 -2391 1094 75 0 0 chr2 185944398 185944531 -67312052 + AluSc SINE Alu 1 133 -176 2516 58 0 10 chr2 185944992 185945303 -67311280 - AluY SINE Alu -3 308 1 1406 222 7 27 chr2 185945381 185945678 -67310905 - AluJo SINE Alu -11 291 1 217 49 0 49 chr2 185945760 185945801 -67310782 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 334 287 91 58 chr2 185946015 185946409 -67310174 + L1M3c LINE L1 3978 4384 -1826 2410 55 7 0 chr2 185948028 185948319 -67308264 - AluY SINE Alu -18 293 1 798 301 81 24 chr2 185948532 185948699 -67307884 - L1MC4a LINE L1 -1882 5926 5770 1775 199 55 15 chr2 185948699 185949097 -67307486 - MLT2D LTR ERVL 0 414 1 798 301 81 24 chr2 185949097 185949387 -67307196 - L1MC4a LINE L1 -2038 5770 5443 2140 110 13 0 chr2 185949412 185949711 -67306872 + AluSg SINE Alu 1 303 -7 955 166 0 94 chr2 185949921 185950074 -67306509 + MLT1A1 LTR MaLR 1 128 -237 2505 118 33 31 chr2 185950074 185950498 -67306085 + MSTA LTR MaLR 4 428 0 955 166 0 94 chr2 185950498 185950567 -67306016 + MLT1A1 LTR MaLR 128 202 -163 1509 167 37 3 chr2 185950572 185950920 -67305663 + L1MB1 LINE L1 5764 6173 -16 218 236 0 14 chr2 185951312 185951384 -67305199 + CT-rich Low_complexity Low_complexity 3 73 0 326 229 31 52 chr2 185951406 185951502 -67305081 - L2 LINE L2 -5 3267 3174 1292 20 13 0 chr2 185952039 185952192 -67304391 - L1PA3 LINE L1 0 6155 6001 1573 180 0 39 chr2 185952196 185952501 -67304082 - AluJo SINE Alu -19 293 1 2312 119 0 0 chr2 185952778 185953089 -67303494 - AluSx SINE Alu -1 311 1 394 317 79 48 chr2 185953851 185954141 -67302442 + MLT1K LTR MaLR 132 430 -158 3725 128 34 75 chr2 185954161 185954919 -67301664 + L1MB2 LINE L1 5443 6169 -2 485 211 32 0 chr2 185955227 185955322 -67301261 + L1ME LINE L1 5483 5580 -541 342 186 17 1 chr2 185955386 185955482 -67301101 - AluS SINE Alu 0 312 224 219 412 24 18 chr2 185955500 185955670 -67300913 + L3 LINE CR1 95 265 -1312 1450 165 41 106 chr2 185956293 185956680 -67299903 + MLT1A1 LTR MaLR 1 362 -3 1610 254 13 31 chr2 185957075 185957528 -67299055 - LTR16A LTR ERVL -5 445 1 2359 223 63 7 chr2 185957887 185958501 -67298082 - L1MC4 LINE L1 -140 7902 7254 1066 203 74 16 chr2 185958516 185958772 -67297811 - L1MC4 LINE L1 -957 7085 6815 1561 174 3 55 chr2 185958775 185958983 -67297600 - AluJo SINE Alu -17 295 78 2088 114 54 26 chr2 185958983 185959335 -67297248 + THE1B LTR MaLR 1 362 -2 11887 90 2 4 chr2 185959337 185960920 -67295663 + THE1B-int LTR MaLR 1 1580 0 1949 148 48 28 chr2 185960920 185961277 -67295306 + THE1B LTR MaLR 1 364 0 1561 174 3 55 chr2 185961277 185961375 -67295208 - AluJo SINE Alu -233 79 1 188 298 18 0 chr2 185961804 185961861 -67294722 + MIR SINE MIR 151 208 -54 29 0 0 0 chr2 185961883 185961912 -67294671 + AT_rich Low_complexity Low_complexity 1 29 0 198 0 0 0 chr2 185961987 185962009 -67294574 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 324 246 105 40 chr2 185962407 185962546 -67294037 + L1MC5 LINE L1 7648 7777 -184 1211 201 47 0 chr2 185962546 185962760 -67293823 - MER58A DNA MER1_type 0 224 1 324 246 105 40 chr2 185962760 185962868 -67293715 + L1MC5 LINE L1 7777 7911 -50 1712 180 0 3 chr2 185963032 185963340 -67293243 - AluJo SINE Alu 0 307 1 207 0 0 0 chr2 185963628 185963651 -67292932 + (T)n Simple_repeat Simple_repeat 1 23 0 2471 72 0 0 chr2 185963735 185964039 -67292544 + AluY SINE Alu 1 304 -7 3379 96 22 12 chr2 185964370 185964860 -67291723 - L1PA10 LINE L1 -15 6153 5659 306 228 114 89 chr2 185964867 185964938 -67291645 + MLT1H LTR MaLR 32 109 -440 2291 110 0 0 chr2 185964938 185965247 -67291336 + AluSg1 SINE Alu 1 309 0 306 228 114 89 chr2 185965247 185965298 -67291285 + MLT1H LTR MaLR 109 157 -392 291 245 183 0 chr2 185965496 185965711 -67290872 + L2 LINE L2 2790 3046 -267 2267 113 3 3 chr2 185966161 185966339 -67290244 - AluSx SINE Alu -1 311 131 2326 84 0 10 chr2 185966339 185966663 -67289920 - AluSp SINE Alu 0 313 1 2267 113 3 3 chr2 185966663 185966795 -67289788 - AluSx SINE Alu -180 132 1 2260 108 7 0 chr2 185967161 185967457 -67289126 - AluSx SINE Alu -14 298 1 1030 172 0 0 chr2 185967544 185967707 -67288876 + FAM SINE Alu 1 163 -12 24 0 0 0 chr2 185967714 185967738 -67288845 + AT_rich Low_complexity Low_complexity 1 24 0 394 312 85 24 chr2 185967766 185968061 -67288522 + L1MCa LINE L1 1242 1554 -4862 408 274 50 81 chr2 185968093 185968354 -67288229 + L1MCa LINE L1 1461 1926 -861 2214 119 3 0 chr2 185968866 185969169 -67287414 + AluSq SINE Alu 1 304 -9 577 252 0 0 chr2 185969171 185969290 -67287293 + FLAM_A SINE Alu 1 119 -14 308 257 68 14 chr2 185969324 185969472 -67287111 + L1MCa LINE L1 2420 2575 -3851 930 276 70 71 chr2 185969477 185970094 -67286489 + L1ME LINE L1 1 616 -5454 1348 212 31 39 chr2 185970112 185970263 -67286320 + L1ME2 LINE L1 5754 5905 -259 1711 166 20 53 chr2 185970263 185970515 -67286068 - MER2 DNA MER2_type -1 343 105 1855 160 0 32 chr2 185970515 185970827 -67285756 - AluJb SINE Alu -10 302 1 1711 166 20 53 chr2 185970827 185970929 -67285654 - MER2 DNA MER2_type -239 105 1 1348 212 31 39 chr2 185970929 185971089 -67285494 + L1ME2 LINE L1 5905 6064 -100 1840 214 148 9 chr2 185971089 185971542 -67285041 - LTR40a LTR ERVL -1 518 3 1348 212 31 39 chr2 185971542 185971616 -67284967 + L1ME2 LINE L1 6064 6137 -27 616 72 103 0 chr2 185972255 185972352 -67284231 - U5 snRNA snRNA -9 107 1 462 314 186 5 chr2 185972379 185972573 -67284010 + MIR SINE MIR 34 262 0 234 380 80 0 chr2 185972814 185972927 -67283656 - L2 LINE L2 -13 3259 3138 2178 85 0 56 chr2 185972946 185973251 -67283332 - AluSx SINE Alu -23 289 2 634 253 124 25 chr2 185973530 185973732 -67282851 + MIR SINE MIR 7 228 -34 313 168 9 21 chr2 185973984 185974061 -67282522 + FLAM_A SINE Alu 74 126 -7 325 297 89 46 chr2 185974110 185974480 -67282103 - L1M4 LINE L1 -2335 3811 3426 24 32 0 0 chr2 185974869 185974900 -67281683 + AT_rich Low_complexity Low_complexity 1 31 0 185 128 64 11 chr2 185975460 185975554 -67281029 + (TA)n Simple_repeat Simple_repeat 2 100 0 1388 241 105 4 chr2 185977098 185977752 -67278831 - L1ME3A LINE L1 -9 6161 5391 200 108 0 27 chr2 185977856 185977893 -67278690 + (CAAAA)n Simple_repeat Simple_repeat 1 36 0 271 98 0 0 chr2 185977925 185977966 -67278617 - L1ME3A LINE L1 -804 5360 5320 2391 82 0 0 chr2 185978566 185978869 -67277714 - AluY SINE Alu -8 303 1 195 277 43 0 chr2 185979111 185979165 -67277418 - MIR SINE MIR -59 149 102 1838 115 12 68 chr2 185979866 185980188 -67276395 - AluSx SINE Alu -8 304 1 21 36 0 0 chr2 185981556 185981584 -67274999 + AT_rich Low_complexity Low_complexity 1 28 0 240 254 0 30 chr2 185981936 185982003 -67274580 + MER5A DNA MER1_type 123 187 -2 2190 90 11 0 chr2 185982009 185982316 -67274267 + AluSp SINE Alu 1 310 0 29 47 0 0 chr2 185982816 185982859 -67273724 + AT_rich Low_complexity Low_complexity 1 43 0 265 340 175 27 chr2 185983349 185983681 -67272902 + L3 LINE CR1 1190 1570 -7 704 161 16 0 chr2 185983810 185983934 -67272649 - FAM SINE Alu -59 126 1 1563 173 20 27 chr2 185984366 185984661 -67271922 - AluJo SINE Alu -19 293 1 683 217 29 6 chr2 185984994 185985169 -67271414 - MER104 DNA MER2_type 0 180 2 1815 171 20 0 chr2 185986597 185986902 -67269681 + AluJb SINE Alu 1 311 -1 1920 108 57 0 chr2 185987674 185987953 -67268630 + AluY SINE Alu 1 295 -16 523 319 99 15 chr2 185988956 185989351 -67267232 + L2 LINE L2 2431 2858 -456 361 325 40 94 chr2 185989382 185989680 -67266903 + L2 LINE L2 2948 3229 -43 1838 163 0 0 chr2 185990088 185990365 -67266218 - AluJb SINE Alu -35 277 1 597 255 57 16 chr2 185992669 185992861 -67263722 - MIR SINE MIR -13 249 50 369 0 0 0 chr2 185993447 185993488 -67263095 + (TG)n Simple_repeat Simple_repeat 2 42 0 21 36 0 0 chr2 185993488 185993516 -67263067 + AT_rich Low_complexity Low_complexity 1 28 0 238 273 193 11 chr2 185995717 185995805 -67260778 - L2 LINE L2 -10 3303 3200 212 409 66 7 chr2 185995837 185995974 -67260609 + L2 LINE L2 3122 3266 -6 222 345 154 0 chr2 185996989 185997099 -67259484 - MIR SINE MIR -114 148 22 807 266 115 0 chr2 185997100 185997326 -67259257 + MIR SINE MIR 11 262 0 24 0 0 0 chr2 185997492 185997516 -67259067 + AT_rich Low_complexity Low_complexity 1 24 0 382 275 66 49 chr2 185998146 185998329 -67258254 + MIR SINE MIR 20 202 -6 1709 143 37 53 chr2 185998721 185999021 -67257562 - AluJo SINE Alu -17 295 1 1682 158 37 27 chr2 186000010 186000308 -67256275 + AluJb SINE Alu 5 305 -7 686 198 99 12 chr2 186000650 186000812 -67255771 + MER58C DNA MER1_type 40 215 0 266 216 68 23 chr2 186001208 186001296 -67255287 - MIR SINE MIR -3 259 168 1512 177 95 64 chr2 186002705 186003157 -67253426 - MER31B LTR ERV1 0 466 1 338 250 23 23 chr2 186003205 186003293 -67253290 - MIR3 SINE MIR -9 199 112 2197 79 0 10 chr2 186003344 186003653 -67252930 + AluY SINE Alu 1 311 0 354 286 12 0 chr2 186003967 186004051 -67252532 - L2 LINE L2 -13 3259 3175 350 224 67 67 chr2 186004127 186004261 -67252322 + MIR SINE MIR 63 196 -66 376 287 37 19 chr2 186004320 186004428 -67252155 - L2 LINE L2 -3 3310 3201 627 215 23 8 chr2 186005221 186005351 -67251232 - FLAM_A SINE Alu 0 133 2 535 182 8 8 chr2 186005351 186005472 -67251111 - L1MB8 LINE L1 -17 6161 6041 296 255 10 0 chr2 186006301 186006399 -67250184 - Charlie5 DNA MER1_type -2492 120 22 2445 94 0 0 chr2 186006874 186007182 -67249401 + AluSg SINE Alu 1 308 -2 841 249 15 10 chr2 186007226 186007423 -67249160 + MIR SINE MIR 65 262 0 2442 97 7 0 chr2 186007905 186008215 -67248368 - AluSx SINE Alu 0 312 1 2380 96 0 0 chr2 186009410 186009713 -67246870 - AluSg1 SINE Alu -6 303 1 204 40 0 0 chr2 186011114 186011139 -67245444 + (TCTA)n Simple_repeat Simple_repeat 1 25 0 29 28 0 0 chr2 186011327 186011363 -67245220 + AT_rich Low_complexity Low_complexity 1 36 0 1885 160 35 0 chr2 186011363 186011701 -67244882 - L1MB5 LINE L1 -8 6166 5817 901 195 27 92 chr2 186011866 186012128 -67244455 - MLT1C LTR MaLR -207 260 16 743 155 27 81 chr2 186012169 186012317 -67244266 + AluJo SINE Alu 1 140 -172 1767 166 0 53 chr2 186012319 186012468 -67244115 + AluJb SINE Alu 1 126 -186 2248 116 0 0 chr2 186012468 186012762 -67243821 + AluSg SINE Alu 1 294 -16 1767 166 0 53 chr2 186012762 186012931 -67243652 + AluJb SINE Alu 126 302 -10 22 99 0 0 chr2 186012936 186013007 -67243576 + AT_rich Low_complexity Low_complexity 1 71 0 353 256 14 22 chr2 186013117 186013254 -67243329 + MER21B LTR ERV1 21 195 -410 * 830 279 52 84 chr2 186013229 186013823 -67242760 + MER21B LTR ERV1 98 672 -191 3931 129 59 29 chr2 186014631 186015392 -67241191 - L1MB3 LINE L1 -7 6176 5393 2102 113 0 49 chr2 186015423 186015749 -67240834 - AluSx SINE Alu -2 310 1 536 303 101 59 chr2 186016362 186017107 -67239476 - HAL1b LINE L1 -468 880 105 2112 122 32 35 chr2 186017270 186017646 -67238937 + THE1C LTR MaLR 1 375 0 10022 108 33 39 chr2 186017646 186017707 -67238876 + THE1C-int LTR MaLR 1 61 -1519 2254 115 0 0 chr2 186017707 186018003 -67238580 + AluY SINE Alu 1 296 -15 10022 108 33 39 chr2 186018003 186018418 -67238165 + THE1C-int LTR MaLR 61 477 -1103 2341 85 0 31 chr2 186018418 186018737 -67237846 + AluY SINE Alu 1 309 -2 10022 108 33 39 chr2 186018737 186019849 -67236734 + THE1C-int LTR MaLR 477 1580 0 1996 130 32 35 chr2 186019849 186020225 -67236358 + THE1C LTR MaLR 1 375 0 1808 158 0 10 chr2 186020347 186020644 -67235939 - AluJb SINE Alu -18 294 1 257 108 46 15 chr2 186020673 186020738 -67235845 + (TG)n Simple_repeat Simple_repeat 2 68 0 323 284 148 43 chr2 186021450 186021612 -67234971 + MIR3 SINE MIR 3 181 -27 2289 87 7 7 chr2 186021997 186022295 -67234288 + AluSq SINE Alu 8 305 -8 199 180 0 60 chr2 186023343 186023393 -67233190 - MIR SINE MIR -59 203 157 1910 153 4 0 chr2 186023521 186023826 -67232757 + AluJb SINE Alu 1 306 0 736 298 145 35 chr2 186024695 186025184 -67231399 + MLT2F LTR ERVL 1 545 -118 1795 216 49 20 chr2 186025184 186025637 -67230946 + MER31B LTR ERV1 1 466 0 570 195 19 26 chr2 186025682 186025836 -67230747 + MLT2E LTR ERVL 475 627 -1 186 162 0 27 chr2 186026875 186026912 -67229671 + MIR3 SINE MIR 125 160 -48 2304 166 59 10 chr2 186027163 186027519 -67229064 - L1PB4 LINE L1 -2 6154 5764 2216 88 0 60 chr2 186027519 186027837 -67228746 - AluSg SINE Alu -11 299 1 2304 166 59 10 chr2 186027837 186027985 -67228598 - L1PB4 LINE L1 -392 5764 5625 390 202 121 30 chr2 186027985 186028084 -67228499 - MIR SINE MIR -65 143 36 23 0 0 0 chr2 186028210 186028233 -67228350 + AT_rich Low_complexity Low_complexity 1 23 0 467 266 32 41 chr2 186028471 186028712 -67227871 + MLT1H1 LTR MaLR 1 280 -269 923 138 153 0 chr2 186029344 186029533 -67227050 - L1PA16 LINE L1 0 6166 5949 483 270 63 56 chr2 186029732 186030002 -67226581 - MLT1I LTR MaLR -26 383 112 2354 97 3 0 chr2 186031493 186031792 -67224791 + AluSx SINE Alu 1 300 -12 2403 150 84 4 chr2 186031862 186032478 -67224105 + MER72 LTR ERV1 1 722 0 259 191 0 0 chr2 186032592 186032639 -67223944 - MIR SINE MIR -3 259 213 388 202 170 0 chr2 186032676 186032770 -67223813 - MIR SINE MIR -37 225 116 24 0 0 0 chr2 186033079 186033103 -67223480 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr2 186034182 186034210 -67222373 + AT_rich Low_complexity Low_complexity 1 28 0 6004 88 29 12 chr2 186034382 186035732 -67220851 + L1PA10 LINE L1 4790 6152 -16 1240 220 55 57 chr2 186036827 186037245 -67219338 - MLT1C LTR MaLR 0 467 51 449 141 26 0 chr2 186037559 186037637 -67218946 + AluJ/FRAM SINE Alu 232 311 -1 578 210 132 39 chr2 186037969 186038174 -67218409 + MLT1H1 LTR MaLR 295 518 -37 237 328 11 71 chr2 186038367 186038550 -67218033 + MIR3 SINE MIR 85 256 -6 2284 115 3 0 chr2 186039307 186039612 -67216971 - AluSx SINE Alu -6 306 1 437 274 83 20 chr2 186039677 186039881 -67216702 + LTR33 LTR ERVL 305 521 0 2071 155 46 19 chr2 186040491 186040924 -67215659 - L1MB8 LINE L1 -5 6173 5729 688 288 26 0 chr2 186040932 186041123 -67215460 + MER63A DNA MER1_type 14 209 -1 337 189 0 0 chr2 186041231 186041284 -67215299 - L2 LINE L2 -11 3261 3209 235 298 106 11 chr2 186041299 186041393 -67215190 + L2 LINE L2 2543 2645 -669 201 265 41 0 chr2 186041571 186041620 -67214963 - L2 LINE L2 -7 3265 3215 303 301 104 82 chr2 186042119 186042398 -67214185 - L1M2 LINE L1 -6098 751 467 531 251 33 49 chr2 186045567 186045750 -67210833 + MIR SINE MIR 71 250 -12 270 226 0 0 chr2 186047905 186047958 -67208625 - MER45A DNA AcHobo -1 177 125 * 1436 251 90 78 chr2 186047955 186048580 -67208003 - MER45C DNA AcHobo -321 632 1 28 61 0 0 chr2 186048901 186048950 -67207633 + AT_rich Low_complexity Low_complexity 1 49 0 831 189 0 0 chr2 186050072 186050204 -67206379 - FLAM_A SINE Alu -1 132 1 665 249 69 5 chr2 186050270 186050459 -67206124 - MIR SINE MIR 0 262 62 210 209 52 63 chr2 186050675 186050805 -67205778 + MIR3 SINE MIR 5 180 -82 2023 231 53 15 chr2 186051019 186051547 -67205036 + MER74B LTR ERVL 75 622 0 24 0 0 0 chr2 186051821 186051845 -67204738 + AT_rich Low_complexity Low_complexity 1 24 0 204 369 0 0 chr2 186053315 186053380 -67203203 + L2 LINE L2 3207 3271 -1 751 191 85 27 chr2 186053451 186053639 -67202944 - MER20 DNA MER1_type -5 214 16 1655 128 0 4 chr2 186053723 186053949 -67202634 + AluSg/x SINE Alu 85 309 -3 331 289 47 0 chr2 186054003 186054131 -67202452 + L1ME4a LINE L1 5670 5803 -318 388 304 159 19 chr2 186054228 186054435 -67202148 + MIR SINE MIR 13 248 -14 305 264 9 0 chr2 186054459 186054565 -67202018 + L1ME4a LINE L1 5969 6075 -46 455 264 56 68 chr2 186054616 186054953 -67201630 - MLT1J1 LTR MaLR -39 411 66 250 236 36 0 chr2 186055304 186055359 -67201224 - MER45A DNA AcHobo 0 178 122 1348 223 146 81 chr2 186055359 186055942 -67200641 - MER45C DNA AcHobo -327 626 6 440 256 40 91 chr2 186056070 186056246 -67200337 + L2 LINE L2 3106 3272 0 2355 119 28 19 chr2 186056259 186056620 -67199963 - THE1B LTR MaLR 0 364 1 2212 114 0 0 chr2 186056726 186057023 -67199560 + AluSg SINE Alu 1 297 -13 265 253 11 44 chr2 186057961 186058052 -67198531 + CT-rich Low_complexity Low_complexity 3 90 0 203 211 19 0 chr2 186059193 186059245 -67197338 + (TAA)n Simple_repeat Simple_repeat 3 55 0 39162 66 4 3 chr2 186059371 186065518 -67191065 - L1PA5 LINE L1 0 6154 1 430 316 26 0 chr2 186065523 186065675 -67190908 + L2 LINE L2 2426 2581 -733 338 267 53 69 chr2 186065812 186065943 -67190640 - MIR SINE MIR -78 184 56 687 330 18 0 chr2 186066582 186066806 -67189777 + L2 LINE L2 2420 2647 -667 412 292 49 49 chr2 186066925 186067110 -67189473 + MIR3 SINE MIR 12 196 -12 2262 113 0 3 chr2 186067403 186067703 -67188880 - AluSx SINE Alu -13 299 1 249 33 0 0 chr2 186068347 186068377 -67188206 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 809 291 40 16 chr2 186068685 186068932 -67187651 - MIR SINE MIR 0 262 10 463 211 11 0 chr2 186069264 186069354 -67187229 - MIR SINE MIR -160 102 12 203 321 94 9 chr2 186070139 186070245 -67186338 - MIR SINE MIR -50 212 98 351 169 0 25 chr2 186070421 186070539 -67186044 + (TA)n Simple_repeat Simple_repeat 2 116 0 504 340 22 5 chr2 186070974 186071159 -67185424 + MIR SINE MIR 6 193 -69 1885 187 7 0 chr2 186072380 186072685 -67183898 - AluJo SINE Alu -5 307 1 2345 88 7 0 chr2 186073343 186073637 -67182946 + AluSg SINE Alu 1 296 -14 1821 153 3 3 chr2 186073643 186073959 -67182624 + AluJo SINE Alu 1 316 0 2146 126 31 0 chr2 186074527 186074821 -67181762 + AluSq SINE Alu 1 303 -10 937 212 82 0 chr2 186074981 186075186 -67181397 - L1ME3A LINE L1 -219 5951 5720 246 95 0 0 chr2 186075186 186075228 -67181355 + (TTTTA)n Simple_repeat Simple_repeat 2 43 0 937 212 82 0 chr2 186075228 186075277 -67181306 - L1ME3A LINE L1 -450 5720 5676 3142 89 54 54 chr2 186075341 186075878 -67180705 - L1PA14 LINE L1 0 6161 5625 723 107 39 0 chr2 186075878 186075981 -67180602 - U6 snRNA snRNA 0 107 1 250 200 118 18 chr2 186076257 186076367 -67180216 - L1PA14 LINE L1 -765 5389 5269 387 216 53 37 chr2 186076460 186076613 -67179970 + L1ME1 LINE L1 5865 6001 -165 638 191 32 13 chr2 186076616 186076773 -67179810 + L1MA10 LINE L1 6168 6327 -7 28197 108 11 11 chr2 186076834 186082342 -67174241 - L1PA8 LINE L1 -3 6169 662 1221 112 0 0 chr2 186082383 186082544 -67174039 - AluSg/x SINE Alu -15 297 137 2492 268 52 56 chr2 186082631 186084017 -67172566 - L1M4 LINE L1 -1082 5064 3685 1582 188 0 15 chr2 186084017 186084288 -67172295 - AluJb SINE Alu -45 267 1 2492 268 52 56 chr2 186084288 186084690 -67171893 - L1M4 LINE L1 -2461 3685 3283 1582 181 95 38 chr2 186084783 186085153 -67171430 - MSTD LTR MaLR 0 396 6 295 243 65 103 chr2 186085212 186085734 -67170849 - L1M4 LINE L1 -2989 3157 2656 502 258 31 12 chr2 186087658 186087821 -67168762 - L1ME LINE L1 -444 5677 5512 286 219 14 0 chr2 186087959 186088032 -67168551 - L1 LINE L1 -1130 5016 4943 2401 92 3 0 chr2 186088198 186088504 -67168079 - AluSx SINE Alu -5 307 1 2211 113 0 0 chr2 186090447 186090738 -67165845 - AluSx SINE Alu -5 307 17 303 289 106 14 chr2 186090780 186090922 -67165661 + MER5B DNA MER1_type 1 155 -23 370 324 129 16 chr2 186092025 186092281 -67164302 - L3b LINE CR1 -165 1418 1134 761 315 109 44 chr2 186092431 186093206 -67163377 + L2 LINE L2 2284 3090 -182 2156 122 3 10 chr2 186093622 186093907 -67162676 + AluSq SINE Alu 1 285 -28 468 0 0 0 chr2 186093907 186093959 -67162624 + (CA)n Simple_repeat Simple_repeat 2 53 0 2156 122 3 10 chr2 186093959 186093984 -67162599 + AluSq SINE Alu 285 309 -4 2115 121 0 19 chr2 186094067 186094374 -67162209 - AluSx SINE Alu -11 301 1 438 323 104 12 chr2 186095026 186095277 -67161306 + L2 LINE L2 2392 2665 -649 25 65 0 0 chr2 186095389 186095435 -67161148 + AT_rich Low_complexity Low_complexity 1 46 0 1374 183 0 12 chr2 186096036 186096282 -67160301 + AluJo SINE Alu 1 243 -69 2215 100 13 3 chr2 186096899 186097198 -67159385 - AluSg SINE Alu -8 302 1 321 361 40 0 chr2 186097431 186097633 -67158950 - L1ME3A LINE L1 -281 5889 5680 290 298 105 41 chr2 186097752 186097923 -67158660 - L2 LINE L2 -6 3307 3126 * 488 341 63 9 chr2 186097916 186098235 -67158348 + L2 LINE L2 2719 3059 -213 1853 117 0 62 chr2 186098594 186098885 -67157698 + AluSx SINE Alu 1 273 -39 211 218 0 26 chr2 186099071 186099149 -67157434 + CT-rich Low_complexity Low_complexity 1 76 0 1567 242 74 78 chr2 186099149 186099997 -67156586 - L1MC4 LINE L1 -158 7884 7040 297 331 22 43 chr2 186101708 186101847 -67154736 - L2 LINE L2 -175 3097 2962 185 333 0 0 chr2 186102072 186102126 -67154457 - L3 LINE CR1 -95 1482 1429 26 30 0 0 chr2 186102485 186102518 -67154065 + AT_rich Low_complexity Low_complexity 1 33 0 705 289 53 8 chr2 186102936 186103182 -67153401 + MIR SINE MIR 1 257 -5 545 207 41 8 chr2 186103292 186103413 -67153170 + MER21B LTR ERV1 329 453 -410 1514 224 36 53 chr2 186103453 186103897 -67152686 + MER89 LTR ERV1 1 535 -24 358 320 33 20 chr2 186104186 186104430 -67152153 - L1ME LINE L1 -347 5774 5528 460 228 245 38 chr2 186104635 186104819 -67151764 + MIR SINE MIR 29 250 -12 290 182 91 127 chr2 186105221 186105331 -67151252 - L3 LINE CR1 -24 1553 1448 2069 112 3 14 chr2 186106869 186107195 -67149388 + AluSg SINE Alu 1 323 0 472 239 25 119 chr2 186109177 186109378 -67147205 - L2 LINE L2 0 3313 3132 704 157 25 0 chr2 186109386 186109507 -67147076 - FLAM_C SINE Alu -19 124 1 435 254 88 3 chr2 186110615 186110935 -67145648 - L1ME4a LINE L1 -4 6117 5730 367 169 39 0 chr2 186111008 186111085 -67145498 - MER116 DNA Mariner 0 80 1 4352 148 24 36 chr2 186111122 186111945 -67144638 - L1MB7 LINE L1 0 6184 5372 242 247 12 25 chr2 186111956 186112037 -67144546 - L1ME4a LINE L1 -517 5604 5525 3850 106 7 3 chr2 186112389 186112967 -67143616 + L1PA16 LINE L1 5586 6165 -1 324 0 0 0 chr2 186113563 186113599 -67142984 + (CA)n Simple_repeat Simple_repeat 2 37 0 498 304 44 0 chr2 186113722 186113880 -67142703 - MIR SINE MIR -43 219 55 211 136 68 0 chr2 186117295 186117339 -67139244 + (CAGAA)n Simple_repeat Simple_repeat 4 50 0 359 171 13 0 chr2 186118342 186118418 -67138165 + (TA)n Simple_repeat Simple_repeat 2 78 0 2378 106 0 0 chr2 186118618 186118930 -67137653 - AluSq SINE Alu -1 312 1 1938 146 17 0 chr2 186120644 186120938 -67135645 + AluSx SINE Alu 1 299 -13 301 230 0 46 chr2 186120973 186121060 -67135523 - MIR SINE MIR -59 203 121 31 0 0 0 chr2 186121530 186121561 -67135022 + AT_rich Low_complexity Low_complexity 1 31 0 200 321 18 0 chr2 186121577 186121633 -67134950 - MIR SINE MIR -155 107 51 2266 87 0 3 chr2 186123234 186123521 -67133062 - AluSg SINE Alu -24 286 1 2117 117 0 24 chr2 186123533 186123831 -67132752 - AluSx SINE Alu -19 293 3 1068 149 7 0 chr2 186123882 186124036 -67132547 - AluSg SINE Alu -31 281 127 453 138 0 0 chr2 186124036 186124101 -67132482 - AluSg SINE Alu -240 71 7 2255 109 7 0 chr2 186124112 186124414 -67132169 - AluSg SINE Alu -6 304 1 960 199 18 0 chr2 186126211 186126382 -67130201 - MER45A DNA AcHobo 0 178 5 22 56 0 0 chr2 186127082 186127118 -67129465 + AT_rich Low_complexity Low_complexity 1 36 0 216 333 37 9 chr2 186127329 186127437 -67129146 - MIR SINE MIR -41 221 111 408 222 111 91 chr2 186127915 186128026 -67128557 - MIR SINE MIR -10 252 134 2341 87 0 3 chr2 186128026 186128325 -67128258 - AluSg SINE Alu -12 298 1 408 222 111 91 chr2 186128325 186128411 -67128172 - MIR SINE MIR -128 134 51 296 269 141 45 chr2 186129119 186129275 -67127308 - MIR3 SINE MIR -36 172 2 269 282 146 5 chr2 186129896 186130007 -67126576 - MIR SINE MIR -86 122 8 382 281 76 48 chr2 186130042 186130252 -67126331 + MIR SINE MIR 47 262 0 189 0 0 0 chr2 186131238 186131259 -67125324 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1916 144 14 14 chr2 186131790 186132082 -67124501 - AluSx SINE Alu -20 292 1 1743 164 61 80 chr2 186133151 186133627 -67122956 + MLT1C LTR MaLR 1 467 0 558 279 28 37 chr2 186133632 186133847 -67122736 - MIR SINE MIR -16 246 34 405 0 0 0 chr2 186133855 186133900 -67122683 + (TG)n Simple_repeat Simple_repeat 2 46 0 221 241 89 0 chr2 186134790 186134869 -67121714 - L2 LINE L2 -1287 2027 1942 2490 64 0 0 chr2 186134967 186135264 -67121319 + AluY SINE Alu 2 298 -13 370 236 48 61 chr2 186135599 186135764 -67120819 - MER65A LTR ERV1 0 445 283 42933 30 24 1 chr2 186135785 186141801 -67114782 - L1HS LINE L1 0 6155 1 292 353 201 8 chr2 186142152 186142769 -67113814 + L2 LINE L2 1519 2254 -1060 211 314 0 0 chr2 186143188 186143239 -67113344 + C-rich Low_complexity Low_complexity 1 51 0 244 241 35 95 chr2 186143413 186143529 -67113054 + MIR SINE MIR 31 140 -68 270 331 94 16 chr2 186144924 186145051 -67111532 + L2 LINE L2 3176 3312 -1 6124 66 11 0 chr2 186145429 186146219 -67110364 - L1PA8 LINE L1 -1 6171 5373 180 0 0 0 chr2 186146692 186146712 -67109871 + (TTTG)n Simple_repeat Simple_repeat 4 23 0 427 295 107 0 chr2 186146812 186146934 -67109649 + MIR SINE MIR 13 147 -115 183 129 0 0 chr2 186146934 186146965 -67109618 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 405 270 43 0 chr2 186147004 186147119 -67109464 + MIR SINE MIR 130 249 -13 9653 198 24 1 chr2 186147349 186147376 -67109207 + L1PA15 LINE L1 3277 3302 -2863 1923 141 23 7 chr2 186147376 186147680 -67108903 + AluSx SINE Alu 1 309 -3 9653 198 24 1 chr2 186147680 186150497 -67106086 + L1PA15 LINE L1 3302 6165 0 540 155 0 0 chr2 186150638 186150735 -67105848 + AluJ/FRAM SINE Alu 214 310 -2 354 240 50 83 chr2 186150837 186150958 -67105625 - L2 LINE L2 -12 3260 3144 182 313 121 10 chr2 186151380 186151479 -67105104 + MIR3 SINE MIR 92 201 -7 23 0 0 0 chr2 186152398 186152421 -67104162 + AT_rich Low_complexity Low_complexity 1 23 0 258 348 87 29 chr2 186152543 186152681 -67103902 - L2 LINE L2 0 3272 3127 1961 126 70 0 chr2 186152792 186153078 -67103505 - AluSg SINE Alu -4 306 1 1141 317 149 20 chr2 186155100 186155993 -67100590 + L2 LINE L2 2282 3313 0 2029 100 36 0 chr2 186156684 186156964 -67099619 + AluSx SINE Alu 1 290 -22 193 138 0 0 chr2 186157737 186157766 -67098817 + MER5C DNA MER1_type 4 32 -292 189 154 0 0 chr2 186157773 186157812 -67098771 + T-rich Low_complexity Low_complexity 1 39 0 7519 27 1 0 chr2 186157813 186159260 -67097323 - L1PA4 LINE L1 -3 6152 4696 264 119 48 0 chr2 186159271 186159313 -67097270 + MER5A DNA MER1_type 55 98 -91 425 181 213 106 chr2 186160007 186160167 -67096416 + MER5B DNA MER1_type 1 177 -1 209 329 88 75 chr2 186162603 186162831 -67093752 - L2 LINE L2 -216 3056 2826 969 27 0 0 chr2 186162840 186162952 -67093631 + L1PA6 LINE L1 6027 6138 -16 1360 260 29 24 chr2 186162961 186163415 -67093168 + LTR40a LTR ERVL 64 519 0 215 254 51 0 chr2 186163864 186163923 -67092660 + MIR SINE MIR 112 173 -89 2052 83 0 70 chr2 186163928 186164230 -67092353 - AluY SINE Alu -15 296 16 381 254 61 55 chr2 186165207 186165372 -67091211 - MIR SINE MIR -16 246 81 226 218 49 141 chr2 186165434 186165576 -67091007 + L1ME4a LINE L1 5977 6105 -16 23 65 0 16 chr2 186165923 186165956 -67090627 + AT_rich Low_complexity Low_complexity 1 34 -27 1794 185 0 20 chr2 186165956 186166253 -67090330 - AluJo SINE Alu -21 291 1 23 65 0 16 chr2 186166253 186166281 -67090302 + AT_rich Low_complexity Low_complexity 34 61 0 430 281 78 88 chr2 186166444 186167034 -67089549 + L1ME4a LINE L1 5522 6105 -16 197 0 71 0 chr2 186167060 186167088 -67089495 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 5571 52 28 7 chr2 186167092 186167805 -67088778 - SVA Other Other -2 1384 657 23358 61 8 3 chr2 186167980 186171822 -67084761 + L1PA6 LINE L1 2307 6154 0 2947 189 1 39 chr2 186171826 186172521 -67084062 + L1MA9 LINE L1 4643 5311 -835 1414 169 0 32 chr2 186172525 186172774 -67083809 + AluJo SINE Alu 64 304 -8 3896 210 22 31 chr2 186172784 186173380 -67083203 + L1MA9 LINE L1 5296 5881 -431 1820 181 10 0 chr2 186173380 186173673 -67082910 + AluSx SINE Alu 1 296 -16 3896 210 22 31 chr2 186173673 186174062 -67082521 + L1MA9 LINE L1 5881 6272 -40 186 43 0 0 chr2 186176772 186176795 -67079788 + (CTTG)n Simple_repeat Simple_repeat 2 24 0 22 35 0 0 chr2 186177360 186177389 -67079194 + AT_rich Low_complexity Low_complexity 1 29 0 285 307 121 77 chr2 186177910 186178350 -67078233 - L2 LINE L2 -611 2703 2245 2209 101 20 0 chr2 186178474 186178771 -67077812 + AluSq SINE Alu 1 303 -10 1680 84 0 9 chr2 186179050 186179264 -67077319 + AluSg/x SINE Alu 84 295 -17 1918 163 0 3 chr2 186179461 186179767 -67076816 - AluSx SINE Alu -7 305 1 437 192 160 51 chr2 186180032 186180188 -67076395 - MER104 DNA MER2_type -3 177 5 491 226 96 11 chr2 186180449 186180626 -67075957 + L1ME4a LINE L1 5568 5759 -362 31 58 0 0 chr2 186182294 186182346 -67074237 + AT_rich Low_complexity Low_complexity 1 52 0 1943 161 7 0 chr2 186182380 186182672 -67073911 - AluSx SINE Alu -18 294 1 219 243 203 40 chr2 186183081 186183155 -67073428 - MIR SINE MIR -90 118 33 24 0 0 0 chr2 186183194 186183218 -67073365 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr2 186183328 186183357 -67073226 + AT_rich Low_complexity Low_complexity 1 29 0 2099 145 0 0 chr2 186183558 186183862 -67072721 + AluSx SINE Alu 1 304 -8 210 118 0 0 chr2 186186259 186186293 -67070290 + (CTG)n Simple_repeat Simple_repeat 2 35 0 518 216 22 36 chr2 186186296 186186435 -67070148 - MIR SINE MIR -2 260 124 344 261 38 13 chr2 186187813 186187970 -67068613 + L1MC5 LINE L1 7014 7174 -787 277 262 12 12 chr2 186188348 186188432 -67068151 + L1ME4a LINE L1 5956 6039 -82 2152 106 3 10 chr2 186188989 186189300 -67067283 - AluSp SINE Alu -4 309 1 232 336 94 0 chr2 186189572 186189721 -67066862 - L2 LINE L2 -907 2407 2245 387 337 60 51 chr2 186189726 186190295 -67066288 + L2 LINE L2 2269 2842 -472 2424 110 48 5 chr2 186190672 186191072 -67065511 - MSTA LTR MaLR -11 417 1 787 275 50 86 chr2 186191228 186191404 -67065179 + L2 LINE L2 2931 3112 -201 2278 120 0 0 chr2 186191404 186191703 -67064880 - AluSx SINE Alu -13 299 1 787 275 50 86 chr2 186191703 186191922 -67064661 + L2 LINE L2 3112 3312 -1 1659 189 3 22 chr2 186192458 186192861 -67063722 + AluJo SINE Alu 1 397 0 534 196 22 28 chr2 186192862 186193041 -67063542 + GA-rich Low_complexity Low_complexity 2 179 0 272 95 0 24 chr2 186193042 186193084 -67063499 + (GAAAA)n Simple_repeat Simple_repeat 4 44 0 1683 169 19 44 chr2 186193741 186194060 -67062523 + AluJo SINE Alu 1 311 -1 580 281 159 21 chr2 186194091 186194660 -67061923 + L1ME4a LINE L1 5473 6120 -1 2304 99 0 0 chr2 186194933 186195227 -67061356 - AluY SINE Alu -17 294 1 326 326 57 53 chr2 186195416 186195643 -67060940 + L2 LINE L2 2854 3081 -191 256 50 25 0 chr2 186195784 186195824 -67060759 - MADE1 DNA Mariner -37 43 3 3541 91 8 108 chr2 186197961 186198621 -67057962 - MER4A LTR ERV1 0 664 71 2165 58 7 0 chr2 186198646 186198921 -67057662 + L1PA7 LINE L1 5875 6151 -3 273 57 0 0 chr2 186198921 186198956 -67057627 + (GGAA)n Simple_repeat Simple_repeat 1 35 0 23 0 0 0 chr2 186200136 186200159 -67056424 + AT_rich Low_complexity Low_complexity 1 23 0 347 41 20 0 chr2 186200391 186200440 -67056143 + (CA)n Simple_repeat Simple_repeat 2 51 0 222 37 0 0 chr2 186200529 186200556 -67056027 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2475 77 0 0 chr2 186201401 186201700 -67054883 + AluY SINE Alu 1 299 -12 187 324 155 14 chr2 186202376 186202524 -67054059 + L2 LINE L2 3144 3312 -1 1672 284 76 8 chr2 186203808 186204332 -67052251 - MER115 DNA AcHobo -64 629 70 479 273 27 0 chr2 186205560 186205670 -67050913 - L2 LINE L2 -2 3311 3199 1747 179 7 17 chr2 186206252 186206553 -67050030 + AluJo SINE Alu 1 298 -14 271 286 0 0 chr2 186207521 186207584 -67048999 - L3b LINE CR1 -246 1337 1275 595 80 0 0 chr2 186207799 186207874 -67048709 + AluSc SINE Alu 203 277 -32 252 0 0 0 chr2 186209451 186209479 -67047104 + (A)n Simple_repeat Simple_repeat 1 28 0 2102 107 3 17 chr2 186213963 186214263 -67042320 - AluSx SINE Alu -14 298 3 502 269 102 0 chr2 186214283 186214469 -67042114 - L1ME1 LINE L1 -5 6161 5957 24 0 0 0 chr2 186214666 186214690 -67041893 + AT_rich Low_complexity Low_complexity 1 24 0 223 356 30 23 chr2 186215355 186215487 -67041096 + MER5A DNA MER1_type 18 150 -39 * 370 283 58 54 chr2 186215375 186215522 -67041061 - MER5A DNA MER1_type -28 161 4 980 133 17 39 chr2 186215638 186215819 -67040764 + FRAM SINE Alu 1 176 0 2100 109 11 0 chr2 186216820 186217105 -67039478 + AluSx SINE Alu 1 288 -24 21 36 0 0 chr2 186217108 186217136 -67039447 + AT_rich Low_complexity Low_complexity 1 28 0 1848 96 8 19 chr2 186218846 186219106 -67037477 - AluSx SINE Alu -27 285 29 311 267 19 0 chr2 186219114 186219219 -67037364 - L1MC4 LINE L1 -1005 7037 6931 1832 178 0 0 chr2 186219223 186219516 -67037067 + AluJb SINE Alu 6 298 -14 2208 101 3 10 chr2 186220073 186220371 -67036212 - AluSx SINE Alu -16 296 1 937 89 82 0 chr2 186220472 186220607 -67035976 + AluSp/q SINE Alu 168 313 0 1590 202 32 21 chr2 186220696 186221073 -67035510 - MER89 LTR ERV1 -3 556 73 1606 98 0 17 chr2 186221073 186221307 -67035276 - MER30 DNA MER1_type 0 230 1 1590 202 32 21 chr2 186221307 186221379 -67035204 - MER89 LTR ERV1 -486 73 3 1719 128 0 4 chr2 186221501 186221792 -67034791 - AluSx SINE Alu 0 326 37 364 33 83 33 chr2 186222296 186222416 -67034167 + (TA)n Simple_repeat Simple_repeat 1 126 0 2070 196 67 24 chr2 186222730 186223347 -67033236 - MER114 LTR ERV 0 648 6 21 36 0 0 chr2 186223628 186223656 -67032927 + AT_rich Low_complexity Low_complexity 1 28 0 32 0 0 0 chr2 186223717 186223749 -67032834 + AT_rich Low_complexity Low_complexity 1 32 0 225 214 107 0 chr2 186223755 186223811 -67032772 - MER94 DNA DNA -72 62 1 4398 163 31 44 chr2 186223912 186224299 -67032284 + L1MB2 LINE L1 5270 5660 -511 1661 148 133 12 chr2 186224299 186224644 -67031939 - MLT1B LTR MaLR -3 387 1 4398 163 31 44 chr2 186224644 186225120 -67031463 + L1MB2 LINE L1 5660 5934 -237 2264 107 0 7 chr2 186225120 186225420 -67031163 - AluSg SINE Alu -12 298 1 4398 163 31 44 chr2 186225420 186225653 -67030930 + L1MB2 LINE L1 5934 6168 -3 2321 101 0 0 chr2 186226252 186226558 -67030025 - AluSx SINE Alu -6 306 1 223 259 69 0 chr2 186226577 186226635 -67029948 + MIR3 SINE MIR 139 200 -8 1758 91 4 35 chr2 186226920 186227174 -67029409 - AluSp SINE Alu -67 246 1 1431 127 131 9 chr2 186229036 186229265 -67027318 + AluSg SINE Alu 44 300 -10 878 138 96 46 chr2 186229265 186229505 -67027078 + Charlie5 DNA MER1_type 2334 2585 -27 392 227 50 34 chr2 186229787 186229906 -67026677 - MIR SINE MIR -46 216 96 938 183 128 20 chr2 186229968 186230219 -67026364 + MER76 LTR ERV 230 507 -181 1289 232 25 81 chr2 186230332 186230728 -67025855 + MER69 DNA AcHobo 157 530 -1996 457 214 122 15 chr2 186230731 186230862 -67025721 + MLT1H LTR MaLR 1 145 -404 302 275 23 32 chr2 186230918 186231136 -67025447 + L1MEc LINE L1 644 797 -5408 250 329 7 22 chr2 186231271 186231408 -67025175 - L1MEc LINE L1 -5953 308 174 2555 139 19 15 chr2 186231529 186231990 -67024593 + MER31A LTR ERV1 6 468 -17 1807 151 6 42 chr2 186231993 186232304 -67024279 - AluJo SINE Alu -12 300 1 307 282 36 36 chr2 186232334 186232444 -67024139 - L1MEc LINE L1 -5958 112 3 641 230 20 34 chr2 186232446 186232594 -67023989 - MIR SINE MIR -113 149 4 2253 118 33 92 chr2 186234111 186234570 -67022013 - MSTB1 LTR MaLR 0 432 1 354 210 60 0 chr2 186234586 186234686 -67021897 - U5 snRNA snRNA -10 106 1 977 263 77 0 chr2 186234780 186235080 -67021503 - LTR16A LTR ERVL -5 445 123 509 332 5 5 chr2 186235453 186235643 -67020940 - HERV16 LTR ERVL -760 4894 4705 643 305 75 27 chr2 186235864 186236704 -67019879 - HERV16 LTR ERVL -1312 4452 3216 1627 313 54 11 chr2 186236726 186237580 -67019003 - HERV16 LTR ERVL -1905 3091 2501 7178 183 37 11 chr2 186237580 186237666 -67018917 - L1 LINE L1 -3365 2963 2881 2021 100 0 0 chr2 186237666 186237917 -67018666 + AluSp SINE Alu 1 251 -62 7178 183 37 11 chr2 186237917 186240727 -67015856 - L1 LINE L1 -3447 2881 3 2210 240 114 21 chr2 186240728 186241454 -67015129 - HERV16 LTR ERVL -2485 2511 1718 1950 147 3 0 chr2 186241455 186241774 -67014809 - AluSx SINE Alu 0 312 1 1656 288 68 36 chr2 186241791 186242199 -67014384 - HERV16 LTR ERVL -4221 775 382 1251 204 22 76 chr2 186242199 186242513 -67014070 - AluJo SINE Alu -15 297 1 1656 288 68 36 chr2 186242513 186242550 -67014033 - HERV16 LTR ERVL -4614 382 348 1680 171 69 0 chr2 186242550 186242825 -67013758 - AluJo SINE Alu -18 294 1 1656 288 68 36 chr2 186242825 186243128 -67013455 - HERV16 LTR ERVL -4648 348 2 763 269 192 11 chr2 186243134 186243420 -67013163 - LTR16A LTR ERVL -26 424 87 211 214 107 0 chr2 186243545 186243601 -67012982 + L2 LINE L2 3244 3305 -8 1924 146 30 0 chr2 186244689 186244991 -67011592 - AluJo SINE Alu -1 311 1 225 311 57 62 chr2 186246108 186246285 -67010298 + MER5B DNA MER1_type 2 177 -1 2169 170 46 48 chr2 186246833 186247325 -67009258 - L1MB5 LINE L1 -313 5861 5369 733 135 7 64 chr2 186247325 186247466 -67009117 - FLAM_C SINE Alu 0 133 1 2169 170 46 48 chr2 186247466 186247496 -67009087 - L1MB5 LINE L1 -805 5369 5340 2384 93 0 0 chr2 186247789 186248089 -67008494 - AluSx SINE Alu -12 300 1 977 175 6 6 chr2 186248098 186248269 -67008314 - AluJb SINE Alu -13 299 129 2214 127 0 3 chr2 186248517 186248650 -67007933 + AluSq SINE Alu 1 133 -180 1890 130 0 0 chr2 186248650 186248912 -67007671 + AluSg SINE Alu 36 297 -13 2214 127 0 3 chr2 186248912 186249086 -67007497 + AluSq SINE Alu 133 307 -6 799 236 46 0 chr2 186249407 186249581 -67007002 + MIR SINE MIR 55 236 -26 206 355 0 0 chr2 186250572 186250648 -67005935 + T-rich Low_complexity Low_complexity 4 79 0 661 242 201 29 chr2 186251165 186251513 -67005070 - L1MC/D LINE L1 -376 5745 5355 628 238 32 0 chr2 186251554 186251680 -67004903 - FLAM_A SINE Alu -3 130 1 259 294 0 12 chr2 186251898 186251983 -67004600 - L1P LINE L1 -1101 5045 4962 363 298 99 48 chr2 186252039 186252351 -67004232 - L1MC/D LINE L1 -1207 4939 4612 2256 76 0 20 chr2 186252360 186252661 -67003922 - AluY SINE Alu -16 295 1 421 253 63 40 chr2 186252940 186253114 -67003469 - HAL1 LINE L1 -6 2501 2324 * 629 311 166 29 chr2 186253109 186253828 -67002755 - L1MC/D LINE L1 -1808 4338 3522 21 71 0 0 chr2 186253880 186253922 -67002661 + AT_rich Low_complexity Low_complexity 1 42 0 824 344 114 20 chr2 186254083 186254979 -67001604 + L2 LINE L2 2234 3272 0 2017 130 10 3 chr2 186255563 186255863 -67000720 - AluSx SINE Alu -10 302 1 444 348 61 11 chr2 186256131 186256312 -67000271 - MIR3 SINE MIR -16 192 3 338 312 32 24 chr2 186258261 186258386 -66998197 + L2 LINE L2 2926 3051 -221 2208 107 3 3 chr2 186259410 186259709 -66996874 - AluSx SINE Alu -13 299 1 2072 110 39 0 chr2 186259712 186259993 -66996590 - AluSq SINE Alu -21 292 1 2587 11 0 0 chr2 186260417 186260696 -66995887 + AluYa5 SINE Alu 28 306 -5 21 36 0 0 chr2 186261472 186261500 -66995083 + AT_rich Low_complexity Low_complexity 1 28 0 661 108 0 0 chr2 186262200 186262283 -66994300 + AluSg/x SINE Alu 211 293 -17 619 309 76 49 chr2 186262317 186262806 -66993777 - L2 LINE L2 -659 2655 2154 206 175 35 35 chr2 186263310 186263367 -66993216 + MIR SINE MIR 95 151 -111 320 299 195 6 chr2 186264171 186264335 -66992248 - L1M2 LINE L1 -5867 982 788 21 0 0 0 chr2 186264423 186264444 -66992139 + GC_rich Low_complexity Low_complexity 1 21 0 2555 59 0 0 chr2 186265689 186265993 -66990590 + AluSx SINE Alu 1 304 -8 2050 150 0 3 chr2 186270162 186270468 -66986115 + AluSx SINE Alu 1 305 -7 1930 63 141 0 chr2 186270655 186270910 -66985673 - AluY SINE Alu -10 291 1 1123 206 0 0 chr2 186271012 186271206 -66985377 + AluJo SINE Alu 1 194 -118 648 136 0 0 chr2 186271460 186271548 -66985035 + FRAM SINE Alu 70 157 -19 1501 72 4 148 chr2 186273071 186273349 -66983234 - L1MA2 LINE L1 0 6304 6067 541 244 197 1 chr2 186273421 186273644 -66982939 + L1ME4a LINE L1 5583 5840 -281 1679 189 7 26 chr2 186274244 186274551 -66982032 + AluJb SINE Alu 6 306 -6 252 279 12 35 chr2 186275069 186275155 -66981428 + MIR SINE MIR 104 187 -75 2275 104 0 3 chr2 186275263 186275561 -66981022 - AluSg1 SINE Alu -12 297 1 26 50 0 0 chr2 186276038 186276078 -66980505 + AT_rich Low_complexity Low_complexity 1 40 0 4068 60 8 19 chr2 186276089 186276620 -66979963 + LTR17 LTR ERV1 256 780 0 1933 91 0 0 chr2 186276650 186276902 -66979681 + HERV17 LTR ERV1 8375 8626 0 2374 59 34 31 chr2 186276903 186277223 -66979360 + LTR17 LTR ERV1 6 326 -454 180 0 0 0 chr2 186277223 186277243 -66979340 + (A)n Simple_repeat Simple_repeat 1 20 0 23 0 0 0 chr2 186277356 186277379 -66979204 + AT_rich Low_complexity Low_complexity 1 23 0 1777 132 90 63 chr2 186277995 186278360 -66978223 - THE1C LTR MaLR 0 375 1 1315 176 81 10 chr2 186280187 186280483 -66976100 + MER33 DNA MER1_type 7 323 -1 206 0 0 65 chr2 186281094 186281125 -66975458 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 483 231 52 15 chr2 186281136 186281270 -66975313 + MIR SINE MIR 53 191 -71 541 267 117 33 chr2 186282037 186282049 -66974534 + MIR SINE MIR 3 13 -249 1494 167 119 15 chr2 186282049 186282318 -66974265 + AluJo SINE Alu 1 297 -5 541 267 117 33 chr2 186282318 186282545 -66974038 + MIR SINE MIR 13 262 0 2004 130 3 13 chr2 186282548 186282848 -66973735 - AluJo SINE Alu -15 297 1 192 125 0 0 chr2 186283636 186283668 -66972915 + (T)n Simple_repeat Simple_repeat 1 32 0 2102 168 6 3 chr2 186283796 186284135 -66972448 - MER2 DNA MER2_type -5 340 1 950 134 0 15 chr2 186284345 186284479 -66972104 + FLAM_C SINE Alu 1 132 -1 1931 133 44 0 chr2 186284550 186284843 -66971740 - AluSx SINE Alu -6 306 1 2164 110 0 13 chr2 186284890 186285191 -66971392 - AluSx SINE Alu -15 297 1 282 326 32 11 chr2 186285274 186285369 -66971214 + L2 LINE L2 3174 3270 -2 2163 135 3 0 chr2 186285742 186286053 -66970530 - AluSx SINE Alu 0 312 1 756 118 0 10 chr2 186286160 186286262 -66970321 - AluSg/x SINE Alu -20 290 190 1792 83 8 30 chr2 186286286 186286550 -66970033 + AluSx SINE Alu 45 302 -10 25 51 0 0 chr2 186286580 186286619 -66969964 + AT_rich Low_complexity Low_complexity 1 39 0 252 162 70 8 chr2 186287010 186287067 -66969516 + MIR SINE MIR 102 153 -55 21 36 0 0 chr2 186288038 186288066 -66968517 + AT_rich Low_complexity Low_complexity 1 28 0 457 191 55 18 chr2 186288236 186288346 -66968237 + L2 LINE L2 3183 3296 -17 1784 174 0 3 chr2 186288374 186288667 -66967916 - AluJb SINE Alu -20 292 1 901 266 160 40 chr2 186288683 186288916 -66967667 - L1MC4a LINE L1 -1961 5847 5643 2363 93 0 0 chr2 186288916 186289206 -66967377 - AluSx SINE Alu -20 292 3 901 266 160 40 chr2 186289206 186289446 -66967137 - L1MC4a LINE L1 -2165 5643 5317 3150 144 20 33 chr2 186290021 186290399 -66966184 - L1MB2 LINE L1 -2 6169 5799 776 124 91 0 chr2 186290399 186290520 -66966063 - FLAM_C SINE Alu 0 133 2 3150 144 20 33 chr2 186290520 186290684 -66965899 - L1MB2 LINE L1 -372 5799 5634 42 86 0 0 chr2 186291258 186291363 -66965220 + AT_rich Low_complexity Low_complexity 1 105 0 22 35 0 0 chr2 186294436 186294465 -66962118 + GC_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 186294499 186294521 -66962062 + GC_rich Low_complexity Low_complexity 1 22 0 301 281 144 43 chr2 186295326 186295465 -66961118 + MIR3 SINE MIR 45 197 -11 1318 160 36 88 chr2 186295944 186296250 -66960333 + AluJo SINE Alu 12 301 -11 1921 161 0 3 chr2 186296657 186296948 -66959635 + AluSx SINE Alu 4 293 -19 22 56 0 0 chr2 186297007 186297043 -66959540 + AT_rich Low_complexity Low_complexity 1 36 0 1825 183 7 0 chr2 186297476 186297771 -66958812 + AluJb SINE Alu 2 298 -14 186 103 0 0 chr2 186297809 186297838 -66958745 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 402 287 40 0 chr2 186297850 186297951 -66958632 - L2 LINE L2 -19 3294 3190 291 331 6 71 chr2 186298776 186298945 -66957638 - MIR3 SINE MIR -10 198 41 2076 229 82 76 chr2 186300220 186300616 -66955967 - L1ME3A LINE L1 -177 5993 5601 2330 130 57 80 chr2 186300616 186301092 -66955491 - MER31B LTR ERV1 0 466 2 2076 229 82 76 chr2 186301092 186301105 -66955478 - L1ME3A LINE L1 -569 5601 5590 2005 158 0 16 chr2 186301105 186301422 -66955161 - AluJb SINE Alu 0 312 1 2076 229 82 76 chr2 186301422 186301671 -66954912 - L1ME3A LINE L1 -580 5590 5344 843 165 0 8 chr2 186301671 186301804 -66954779 + FLAM_C SINE Alu 2 133 0 2076 229 82 76 chr2 186301804 186302126 -66954457 - L1ME3A LINE L1 -826 5344 4999 1144 259 91 10 chr2 186302166 186302241 -66954342 - L1ME3A LINE L1 -1274 4872 4804 219 36 0 0 chr2 186302241 186302269 -66954314 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1144 259 91 10 chr2 186302269 186302602 -66953981 - L1ME3A LINE L1 -1342 4804 4431 461 242 65 0 chr2 186302611 186302735 -66953848 + MARNA DNA Mariner 444 575 -11 936 107 25 44 chr2 186303127 186303286 -66953297 - FRAM SINE Alu -3 173 18 196 347 132 28 chr2 186303541 186303685 -66952898 + L2 LINE L2 3112 3270 -2 283 147 162 0 chr2 186304566 186304634 -66951949 + L1MB3 LINE L1 5631 5709 -412 2502 84 0 0 chr2 186304681 186304989 -66951594 - AluSx SINE Alu -4 308 1 389 256 33 25 chr2 186305330 186305370 -66951213 + L1ME4a LINE L1 5993 6031 -90 1349 173 193 33 chr2 186305370 186305764 -66950819 - MSTB2 LTR MaLR 0 457 1 389 256 33 25 chr2 186305764 186305844 -66950739 + L1ME4a LINE L1 6031 6114 -7 234 220 34 0 chr2 186305888 186305947 -66950636 + L3b LINE CR1 1215 1275 -308 788 174 90 0 chr2 186305981 186306148 -66950435 + L1MB3 LINE L1 5711 5892 -291 1408 30 0 0 chr2 186306148 186306314 -66950269 + L1PA3 LINE L1 5990 6155 0 1566 157 13 17 chr2 186306316 186306615 -66949968 + L1MB3 LINE L1 5879 6176 -7 338 280 42 85 chr2 186306994 186307230 -66949353 + L1M4 LINE L1 5135 5360 -786 405 255 58 16 chr2 186308324 186308468 -66948115 - MLT1L LTR MaLR -98 484 280 180 0 0 0 chr2 186308585 186308605 -66947978 + (T)n Simple_repeat Simple_repeat 1 20 0 247 185 25 62 chr2 186308717 186308798 -66947785 - MLT1L LTR MaLR -536 79 2 1158 146 80 42 chr2 186310383 186310623 -66945960 - AluJo SINE Alu 0 310 63 842 171 0 0 chr2 186310635 186310764 -66945819 - FLAM_C SINE Alu -4 129 1 324 203 0 13 chr2 186310778 186310857 -66945726 + MER103 DNA DNA 88 165 -1 202 130 19 19 chr2 186310861 186310915 -66945668 + (TA)n Simple_repeat Simple_repeat 1 54 0 2389 85 0 0 chr2 186310915 186311208 -66945375 - AluY SINE Alu -18 293 1 27 87 0 0 chr2 186311619 186311688 -66944895 + AT_rich Low_complexity Low_complexity 1 69 0 2010 175 18 0 chr2 186313201 186313543 -66943040 + MER7A DNA MER2_type 1 346 0 21 0 0 0 chr2 186314114 186314135 -66942448 + AT_rich Low_complexity Low_complexity 1 21 0 273 119 0 0 chr2 186316471 186316513 -66940070 + (CA)n Simple_repeat Simple_repeat 1 42 0 300 307 44 26 chr2 186316969 186317085 -66939498 + MIR SINE MIR 42 157 -59 321 206 206 11 chr2 186317128 186317220 -66939363 - L2 LINE L2 -4 3309 3200 23 0 0 0 chr2 186318946 186318969 -66937614 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 186319235 186319258 -66937325 + AT_rich Low_complexity Low_complexity 1 23 0 2437 258 168 46 chr2 186320651 186321729 -66934854 - HAL1 LINE L1 -1 2506 1561 351 0 0 0 chr2 186321729 186321768 -66934815 + (TG)n Simple_repeat Simple_repeat 1 39 0 2437 258 168 46 chr2 186321768 186322922 -66933661 - HAL1 LINE L1 -946 1561 1 496 184 48 0 chr2 186323016 186323119 -66933464 + MIR SINE MIR 153 260 -2 1816 180 0 3 chr2 186323157 186323446 -66933137 - AluJb SINE Alu -13 299 12 1937 125 24 14 chr2 186323566 186323853 -66932730 - AluSx SINE Alu -22 290 1 638 221 132 59 chr2 186324142 186324431 -66932152 + MSTD LTR MaLR 44 353 -43 1928 152 14 3 chr2 186325052 186325349 -66931234 - AluSx SINE Alu -12 300 1 674 129 0 0 chr2 186325395 186325496 -66931087 - AluS SINE Alu -212 101 1 191 154 103 0 chr2 186325640 186325679 -66930904 - MIR SINE MIR -2 260 218 2010 107 8 0 chr2 186326714 186326977 -66929606 - AluSg SINE Alu -18 292 28 326 132 0 44 chr2 186329707 186329775 -66926808 + (TA)n Simple_repeat Simple_repeat 2 66 0 513 199 15 151 chr2 186330387 186330432 -66926151 + MER5B DNA MER1_type 1 50 -128 1789 160 0 48 chr2 186330432 186330745 -66925838 + AluJb SINE Alu 1 298 -14 513 199 15 151 chr2 186330745 186330905 -66925678 + MER5B DNA MER1_type 50 178 0 382 244 195 16 chr2 186331086 186331209 -66925374 + MER5A DNA MER1_type 44 188 -1 353 289 70 9 chr2 186332188 186332302 -66924281 + MIR3 SINE MIR 15 135 -73 193 286 0 0 chr2 186333275 186333317 -66923266 + L3b LINE CR1 1293 1334 -249 219 349 62 8 chr2 186333711 186333840 -66922743 + L2 LINE L2 2671 2806 -508 251 167 202 0 chr2 186334268 186334352 -66922231 - MER103 DNA DNA -10 156 56 1317 195 56 74 chr2 186334890 186335280 -66921303 + MLT1B LTR MaLR 8 390 0 1267 134 131 72 chr2 186335278 186335477 -66921106 + MER44D DNA MER2_type 1 187 -2304 * 2149 128 22 30 chr2 186335477 186335843 -66920740 - THE1B LTR MaLR -1 363 1 1267 134 131 72 chr2 186335843 186335867 -66920716 + MER44D DNA MER2_type 187 208 -2283 2509 62 10 0 chr2 186335867 186336175 -66920408 + AluY SINE Alu 1 311 0 1267 134 131 72 chr2 186336175 186336270 -66920313 + MER44D DNA MER2_type 208 609 0 651 313 55 5 chr2 186336372 186336573 -66920010 - MIR SINE MIR 0 262 52 213 244 26 64 chr2 186337244 186337322 -66919261 - MIR3 SINE MIR -7 201 127 990 206 82 21 chr2 186337514 186337795 -66918788 + LTR16A1 LTR ERVL 159 456 -1 7440 35 16 0 chr2 186338548 186339554 -66917029 - L1PA3 LINE L1 -3 6152 5143 2210 110 3 22 chr2 186354189 186354507 -66902076 + AluSx SINE Alu 1 312 0 903 230 26 0 chr2 186354744 186354935 -66901648 + L1ME1 LINE L1 5966 6161 -5 28 29 0 0 chr2 186355417 186355452 -66901131 + AT_rich Low_complexity Low_complexity 1 35 0 307 157 12 60 chr2 186355452 186355535 -66901048 - L1PA15 LINE L1 -5 6160 6082 250 161 0 32 chr2 186355631 186355693 -66900890 + CT-rich Low_complexity Low_complexity 4 63 0 22 56 0 0 chr2 186358353 186358389 -66898194 + AT_rich Low_complexity Low_complexity 1 36 0 33 56 0 0 chr2 186365014 186365068 -66891515 + AT_rich Low_complexity Low_complexity 1 54 0 29 0 0 0 chr2 186368962 186368991 -66887592 + AT_rich Low_complexity Low_complexity 1 29 0 225 255 234 0 chr2 186369633 186369727 -66886856 + MIR SINE MIR 28 143 -119 2107 122 0 3 chr2 186369826 186370155 -66886428 + AluSx SINE Alu 1 312 0 322 317 24 24 chr2 186370273 186370396 -66886187 - MIR3 SINE MIR -9 199 77 260 176 11 33 chr2 186372649 186372740 -66883843 + (TA)n Simple_repeat Simple_repeat 1 89 0 480 368 31 0 chr2 186396310 186396473 -66860110 + MIR3 SINE MIR 20 187 -21 6370 50 8 4 chr2 186399125 186399902 -66856681 - L1PA7 LINE L1 -2 6152 5373 361 198 229 32 chr2 186399907 186400064 -66856519 - MER112 DNA MER1_type -72 188 1 251 354 69 28 chr2 186408463 186408607 -66847976 - MIR3 SINE MIR -10 198 49 1781 156 7 10 chr2 186408691 186408980 -66847603 + AluSx SINE Alu 25 312 0 2291 111 0 3 chr2 186409663 186409969 -66846614 - AluSx SINE Alu -7 305 1 279 0 0 0 chr2 186414088 186414119 -66842464 + (TA)n Simple_repeat Simple_repeat 2 32 0 25 0 0 0 chr2 186415533 186415558 -66841025 + AT_rich Low_complexity Low_complexity 1 25 0 27 29 0 0 chr2 186416346 186416380 -66840203 + AT_rich Low_complexity Low_complexity 1 34 0 243 290 10 60 chr2 186416786 186416886 -66839697 + L2 LINE L2 3178 3272 0 234 128 0 0 chr2 186417348 186417387 -66839196 + (TATG)n Simple_repeat Simple_repeat 2 40 0 28 0 0 0 chr2 186417432 186417460 -66839123 + AT_rich Low_complexity Low_complexity 1 28 0 635 249 14 9 chr2 186424140 186424311 -66832272 - MER20B DNA MER1_type -17 202 28 209 225 84 28 chr2 186428619 186428690 -66827893 - MER91B DNA MER1_type -53 137 63 362 309 115 18 chr2 186435914 186436044 -66820539 - MIR3 SINE MIR -5 203 52 309 203 27 0 chr2 186436044 186436118 -66820465 + MER116 DNA Mariner 5 80 0 362 309 115 18 chr2 186436118 186436152 -66820431 - MIR3 SINE MIR -156 52 23 1060 31 0 0 chr2 186439250 186439377 -66817206 - L1PA3 LINE L1 0 6155 6029 1346 26 0 0 chr2 186439377 186439533 -66817050 + L1P1 LINE L1 5654 5809 -346 211 254 17 17 chr2 186439648 186439707 -66816876 + (TATATG)n Simple_repeat Simple_repeat 4 62 0 22 0 0 0 chr2 186440735 186440757 -66815826 + AT_rich Low_complexity Low_complexity 1 22 0 27 62 0 0 chr2 186440818 186440866 -66815717 + AT_rich Low_complexity Low_complexity 1 48 0 360 340 115 31 chr2 186441520 186441841 -66814742 - L3b LINE CR1 -4 1579 1232 180 0 0 0 chr2 186441868 186441888 -66814695 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2650 45 0 0 chr2 186442953 186443264 -66813319 - AluY SINE Alu 0 311 1 2409 40 40 10 chr2 186443269 186443568 -66813015 - AluY SINE Alu -3 308 1 22 0 0 0 chr2 186444441 186444463 -66812120 + AT_rich Low_complexity Low_complexity 1 22 0 31 26 0 0 chr2 186446879 186446917 -66809666 + AT_rich Low_complexity Low_complexity 1 38 0 1141 152 78 5 chr2 186449696 186449979 -66806604 + MER2 DNA MER2_type 1 345 0 23 33 0 0 chr2 186452938 186452968 -66803615 + AT_rich Low_complexity Low_complexity 1 30 0 2121 131 0 3 chr2 186453717 186454015 -66802568 + AluSx SINE Alu 1 297 -15 311 0 26 0 chr2 186456935 186456974 -66799609 + (CAAAA)n Simple_repeat Simple_repeat 5 44 0 27 29 0 0 chr2 186460459 186460493 -66796090 + AT_rich Low_complexity Low_complexity 1 34 0 318 0 0 0 chr2 186464957 186464997 -66791586 - L1PA3 LINE L1 -4 6151 6112 468 0 0 0 chr2 186476811 186476863 -66779720 + (TA)n Simple_repeat Simple_repeat 2 53 0 63 75 0 0 chr2 186477961 186478094 -66778489 + AT_rich Low_complexity Low_complexity 1 133 0 349 258 17 50 chr2 186478106 186478226 -66778357 - MER5C DNA MER1_type -164 160 45 711 153 0 0 chr2 186478458 186478569 -66778014 - L1PA16 LINE L1 -9 6157 6047 925 98 0 0 chr2 186478826 186478969 -66777614 - L1MB4 LINE L1 0 6180 6038 27 29 0 0 chr2 186482541 186482575 -66774008 + AT_rich Low_complexity Low_complexity 1 34 0 24 32 0 0 chr2 186483268 186483299 -66773284 + AT_rich Low_complexity Low_complexity 1 31 0 423 0 0 0 chr2 186485777 186485824 -66770759 + (TA)n Simple_repeat Simple_repeat 2 48 0 276 30 0 0 chr2 186486714 186486747 -66769836 + (TA)n Simple_repeat Simple_repeat 1 33 0 246 359 0 0 chr2 186487439 186487517 -66769066 + L2 LINE L2 2215 2292 -1022 283 357 41 47 chr2 186487791 186488089 -66768494 + L2 LINE L2 2682 2974 -298 2288 106 0 7 chr2 186488091 186488394 -66768189 - AluSx SINE Alu -11 301 1 27 62 0 0 chr2 186489036 186489084 -66767499 + AT_rich Low_complexity Low_complexity 1 48 0 12918 45 7 0 chr2 186494739 186497105 -66759478 + L1PA4 LINE L1 3761 6149 -6 21 36 0 0 chr2 186497105 186497133 -66759450 + AT_rich Low_complexity Low_complexity 1 28 0 12931 44 7 0 chr2 186499000 186501361 -66755222 + L1PA4 LINE L1 3761 6144 -11 26 30 0 0 chr2 186501361 186501394 -66755189 + AT_rich Low_complexity Low_complexity 1 33 0 182 224 163 82 chr2 186505278 186505376 -66751207 + L2 LINE L2 3208 3313 0 2185 110 0 10 chr2 186508138 186508446 -66748137 + AluSx SINE Alu 1 305 -7 24 53 0 0 chr2 186510000 186510038 -66746545 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr2 186510139 186510160 -66746423 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 186510441 186510463 -66746120 + AT_rich Low_complexity Low_complexity 1 22 0 219 276 0 0 chr2 186511839 186511915 -66744668 + CT-rich Low_complexity Low_complexity 2 77 0 28 29 0 0 chr2 186512953 186512988 -66743595 + AT_rich Low_complexity Low_complexity 1 35 0 31 58 0 0 chr2 186514100 186514152 -66742431 + AT_rich Low_complexity Low_complexity 1 52 0 37 23 0 0 chr2 186514289 186514333 -66742250 + AT_rich Low_complexity Low_complexity 1 44 0 26 0 0 0 chr2 186515445 186515471 -66741112 + AT_rich Low_complexity Low_complexity 1 26 0 575 63 13 0 chr2 186515893 186515972 -66740611 + MADE1 DNA Mariner 1 80 0 252 337 25 61 chr2 186516245 186516408 -66740175 - MIR SINE MIR -55 207 51 24 100 0 0 chr2 186516538 186516618 -66739965 + AT_rich Low_complexity Low_complexity 1 80 0 288 0 0 0 chr2 186517025 186517057 -66739526 + (TA)n Simple_repeat Simple_repeat 2 33 0 31 0 0 0 chr2 186518309 186518340 -66738243 + AT_rich Low_complexity Low_complexity 1 31 0 202 211 0 0 chr2 186522305 186522343 -66734240 + T-rich Low_complexity Low_complexity 3 40 0 345 93 0 0 chr2 186523894 186523948 -66732635 + (CAA)n Simple_repeat Simple_repeat 2 55 0 2810 7 0 0 chr2 186525809 186526118 -66730465 - AluYa5 SINE Alu -2 309 1 1818 164 11 0 chr2 186526126 186526412 -66730171 - AluJo SINE Alu -21 291 3 24 53 0 0 chr2 186527362 186527400 -66729183 + AT_rich Low_complexity Low_complexity 1 38 0 216 0 0 0 chr2 186528703 186528727 -66727856 + (T)n Simple_repeat Simple_repeat 1 24 0 245 163 75 25 chr2 186530449 186530529 -66726054 + (TATATG)n Simple_repeat Simple_repeat 6 89 0 1543 178 95 52 chr2 186532653 186533053 -66723530 + MER63B DNA MER1_type 15 431 -5 210 37 0 0 chr2 186534656 186534683 -66721900 + (TC)n Simple_repeat Simple_repeat 2 28 0 213 359 0 0 chr2 186535612 186535757 -66720826 + CT-rich Low_complexity Low_complexity 1 145 0 3451 125 25 13 chr2 186537634 186538232 -66718351 + L1MA7 LINE L1 5687 6291 0 246 62 0 0 chr2 186538620 186538652 -66717931 + (A)n Simple_repeat Simple_repeat 1 32 0 2555 46 0 0 chr2 186539087 186539392 -66717191 - AluY SINE Alu -6 305 1 2363 40 40 10 chr2 186539397 186539695 -66716888 - AluY SINE Alu -4 307 1 22 0 0 0 chr2 186540568 186540590 -66715993 + AT_rich Low_complexity Low_complexity 1 22 0 31 26 0 0 chr2 186543007 186543045 -66713538 + AT_rich Low_complexity Low_complexity 1 38 0 1146 152 78 5 chr2 186545824 186546107 -66710476 + MER2 DNA MER2_type 1 345 0 23 33 0 0 chr2 186549066 186549096 -66707487 + AT_rich Low_complexity Low_complexity 1 30 0 2088 131 0 3 chr2 186549845 186550143 -66706440 + AluSx SINE Alu 1 297 -15 491 0 17 0 chr2 186553064 186553123 -66703460 + (CAAAA)n Simple_repeat Simple_repeat 5 64 0 27 29 0 0 chr2 186556608 186556642 -66699941 + AT_rich Low_complexity Low_complexity 1 34 0 318 0 0 0 chr2 186561104 186561144 -66695439 - L1PA3 LINE L1 -4 6151 6112 220 211 0 0 chr2 186564410 186564462 -66692121 + T-rich Low_complexity Low_complexity 1 52 0 245 327 39 10 chr2 186564936 186565040 -66691543 - L3b LINE CR1 -80 1503 1397 449 188 0 10 chr2 186576774 186576875 -66679708 + GA-rich Low_complexity Low_complexity 1 100 0 2214 118 0 0 chr2 186576997 186577303 -66679280 - AluY SINE Alu -5 306 1 21 36 0 0 chr2 186578609 186578637 -66677946 + AT_rich Low_complexity Low_complexity 1 28 0 33 25 0 0 chr2 186581642 186581682 -66674901 + AT_rich Low_complexity Low_complexity 1 40 0 228 262 42 60 chr2 186584362 186584530 -66672053 + MER104 DNA Tc2 1 165 -15 23 33 0 0 chr2 186592594 186592624 -66663959 + AT_rich Low_complexity Low_complexity 1 30 0 2104 123 0 26 chr2 186595135 186595443 -66661140 - AluSx SINE Alu -10 302 3 1872 106 49 0 chr2 186599949 186600214 -66656369 + AluSg SINE Alu 1 278 -32 494 283 21 53 chr2 186600240 186600427 -66656156 + MIR SINE MIR 57 237 -25 333 0 0 0 chr2 186600548 186600585 -66655998 + (TG)n Simple_repeat Simple_repeat 1 37 0 208 339 24 60 chr2 186600833 186601081 -66655502 + L2 LINE L2 2549 2787 -527 247 333 215 18 chr2 186601262 186601490 -66655093 + L2 LINE L2 2995 3267 -5 211 259 83 46 chr2 186602520 186602628 -66653955 - MIR SINE MIR -1 261 150 227 330 50 0 chr2 186603000 186603100 -66653483 - MIR SINE MIR -2 260 156 254 304 235 0 chr2 186603121 186603223 -66653360 - L2 LINE L2 0 3313 3188 231 179 134 0 chr2 186603634 186603701 -66652882 - L1MB2 LINE L1 -1 6170 6095 219 260 0 0 chr2 186605199 186605249 -66651334 + MIR SINE MIR 103 152 -110 278 284 0 12 chr2 186606671 186606752 -66649831 - MIR SINE MIR -71 191 112 899 169 109 34 chr2 186607883 186608150 -66648433 - L1MB8 LINE L1 -1 6177 5891 1510 157 38 44 chr2 186608252 186608570 -66648013 - L1MB8 LINE L1 -116 6062 5747 1747 163 0 33 chr2 186609210 186609517 -66647066 - AluJb SINE Alu -11 301 5 219 69 0 0 chr2 186609595 186609624 -66646959 + (TA)n Simple_repeat Simple_repeat 1 29 0 239 269 71 64 chr2 186612838 186612979 -66643604 - L2 LINE L2 -213 3059 2918 29 0 0 0 chr2 186614597 186614626 -66641957 + AT_rich Low_complexity Low_complexity 1 29 0 442 361 18 22 chr2 186618005 186618232 -66638351 + L2 LINE L2 2311 2536 -778 384 287 96 36 chr2 186618370 186618537 -66638046 + MIR SINE MIR 30 206 -56 244 368 17 0 chr2 186620392 186620509 -66636074 + MIR SINE MIR 73 191 -71 457 320 80 10 chr2 186620591 186620791 -66635792 + MER102a DNA MER1_type 117 330 0 285 51 0 0 chr2 186621830 186621869 -66634714 + (TG)n Simple_repeat Simple_repeat 1 39 0 22 35 0 0 chr2 186623138 186623167 -66633416 + AT_rich Low_complexity Low_complexity 1 29 0 252 258 106 33 chr2 186623290 186623441 -66633142 + L2 LINE L2 3152 3313 0 44 0 0 0 chr2 186623785 186623829 -66632754 + AT_rich Low_complexity Low_complexity 1 44 0 21 0 0 0 chr2 186627431 186627452 -66629131 + AT_rich Low_complexity Low_complexity 1 21 0 348 127 0 0 chr2 186631461 186631516 -66625067 + (TG)n Simple_repeat Simple_repeat 2 56 0 226 253 93 0 chr2 186632469 186632544 -66624039 - MIR3 SINE MIR -1 207 126 199 279 16 0 chr2 186632706 186632767 -66623816 - MIR3 SINE MIR -2 206 145 1541 114 18 5 chr2 186633536 186633755 -66622828 + AluSg/x SINE Alu 76 297 -15 326 176 0 44 chr2 186635678 186635746 -66620837 + MER103 DNA DNA 63 127 -39 292 363 88 6 chr2 186637555 186637715 -66618868 + MER91B DNA MER1_type 17 189 -1 553 278 12 39 chr2 186637857 186638112 -66618471 - L1M4 LINE L1 -1163 4983 4736 287 301 154 6 chr2 186638638 186638794 -66617789 + MIR SINE MIR 84 262 0 1185 119 76 9 chr2 186639082 186639292 -66617291 + LTR1 LTR ERV1 11 234 -551 906 96 0 8 chr2 186639291 186639416 -66617167 + LTR1 LTR ERV1 662 785 0 * 24 0 0 0 chr2 186641110 186641134 -66615449 + AT_rich Low_complexity Low_complexity 1 24 0 250 296 14 14 chr2 186641693 186641764 -66614819 + MER5A DNA MER1_type 8 78 -111 399 281 9 9 chr2 186642514 186642628 -66613955 - MIR SINE MIR -77 131 18 21 57 0 0 chr2 186643583 186643618 -66612965 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr2 186643741 186643770 -66612813 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 186644018 186644039 -66612544 + AT_rich Low_complexity Low_complexity 1 21 0 2220 118 0 3 chr2 186645041 186645345 -66611238 + AluSx SINE Alu 1 303 -9 1495 75 58 35 chr2 186649187 186649363 -66607220 + MLT2A1 LTR ERVL 214 398 -46 186 103 0 0 chr2 186649363 186649392 -66607191 + (TA)n Simple_repeat Simple_repeat 1 29 0 1495 75 58 35 chr2 186649392 186649441 -66607142 + MLT2A1 LTR ERVL 398 444 0 213 91 36 36 chr2 186649504 186649559 -66607024 + A-rich Low_complexity Low_complexity 4 58 0 194 273 0 0 chr2 186649881 186649925 -66606658 - L2 LINE L2 -8 3305 3262 331 318 8 40 chr2 186649958 186650084 -66606499 - L2 LINE L2 0 3272 3151 294 291 18 27 chr2 186650310 186650420 -66606163 - L2 LINE L2 -15 3298 3190 380 282 82 41 chr2 186650914 186651084 -66605499 + MIR SINE MIR 65 241 -21 343 314 88 7 chr2 186652087 186652224 -66604359 + MIR SINE MIR 1 148 -114 1876 201 20 0 chr2 186652888 186653246 -66603337 + MLT1A1 LTR MaLR 1 365 0 569 342 167 10 chr2 186653659 186654246 -66602337 + L2 LINE L2 1984 2662 -652 1962 156 28 41 chr2 186654454 186654635 -66601948 + MLT1B LTR MaLR 1 183 -207 1676 181 0 32 chr2 186654635 186654950 -66601633 + AluJo SINE Alu 3 307 -5 1962 156 28 41 chr2 186654950 186655160 -66601423 + MLT1B LTR MaLR 183 387 -3 1268 130 14 37 chr2 186655543 186655758 -66600825 + MER2 DNA MER2_type 2 211 -134 238 214 0 0 chr2 186655952 186655994 -66600589 + MER90 LTR ERV1 1 42 -572 4324 148 20 4 chr2 186655994 186656728 -66599855 - L1MC2 LINE L1 -150 6194 5449 332 94 19 0 chr2 186657744 186657797 -66598786 + (TCCC)n Simple_repeat Simple_repeat 4 57 0 2056 129 0 0 chr2 186657804 186658083 -66598500 - AluSx SINE Alu -33 279 1 210 118 0 0 chr2 186658206 186658240 -66598343 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 4862 74 11 0 chr2 186658254 186658891 -66597692 - L1PA10 LINE L1 -2 6166 5523 1156 180 18 14 chr2 186659558 186659775 -66596808 + MER20 DNA MER1_type 2 219 0 25 0 0 0 chr2 186659964 186659989 -66596594 + AT_rich Low_complexity Low_complexity 1 25 0 23 54 0 0 chr2 186661230 186661267 -66595316 + AT_rich Low_complexity Low_complexity 1 37 0 288 372 51 0 chr2 186661487 186661624 -66594959 - MIR3 SINE MIR -20 188 45 6644 25 3 0 chr2 186661626 186662400 -66594183 + L1PA5 LINE L1 5379 6154 0 252 0 0 0 chr2 186664042 186664070 -66592513 + (CA)n Simple_repeat Simple_repeat 2 29 0 1950 115 51 3 chr2 186664330 186664626 -66591957 + AluSx SINE Alu 1 310 -2 2802 256 78 13 chr2 186665818 186667339 -66589244 - L1M4 LINE L1 -1851 4295 2636 955 218 40 91 chr2 186667751 186668104 -66588479 - MLT1C LTR MaLR 0 467 133 244 309 116 78 chr2 186670517 186670964 -66585619 - L2 LINE L2 -4 3268 2805 340 24 0 0 chr2 186671387 186671428 -66585155 - U7 snRNA snRNA -20 43 3 1512 127 181 0 chr2 186672213 186672473 -66584110 + AluSg SINE Alu 1 307 -3 21 0 0 0 chr2 186672562 186672583 -66584000 + AT_rich Low_complexity Low_complexity 1 21 0 211 282 141 14 chr2 186673289 186673431 -66583152 - MIR SINE MIR -81 181 22 22 35 0 0 chr2 186673762 186673791 -66582792 + AT_rich Low_complexity Low_complexity 1 29 0 1243 191 0 37 chr2 186674594 186674835 -66581748 - AluJo SINE Alu -55 257 26 414 289 48 72 chr2 186674855 186675063 -66581520 + Charlie8 DNA MER1_type 1 203 -2214 216 103 103 0 chr2 186677986 186678025 -66578558 + MIR3 SINE MIR 118 160 -48 1355 141 28 28 chr2 186678214 186678469 -66578114 - L1MB3 LINE L1 -7 6176 5922 433 301 14 42 chr2 186678520 186678663 -66577920 - L2 LINE L2 0 3272 3134 2168 119 0 0 chr2 186679114 186679408 -66577175 + AluY SINE Alu 3 296 -15 1156 111 17 39 chr2 186679408 186679588 -66576995 + AluSq SINE Alu 135 310 -3 495 323 192 9 chr2 186679892 186680226 -66576357 - L3 LINE CR1 -53 1524 1130 290 298 61 76 chr2 186680966 186681097 -66575486 - L3 LINE CR1 -533 1044 916 645 332 81 19 chr2 186681102 186681412 -66575171 - L3 LINE CR1 -896 681 353 261 145 0 43 chr2 186681486 186681555 -66575028 + L1MA4 LINE L1 6235 6300 0 2053 131 40 0 chr2 186681615 186681913 -66574670 - AluSq SINE Alu -3 310 1 439 271 121 24 chr2 186683175 186683341 -66573242 + MIR3 SINE MIR 21 202 -6 811 106 49 0 chr2 186684312 186684435 -66572148 + MER20 DNA MER1_type 91 219 0 189 382 36 36 chr2 186686634 186686744 -66569839 + MIR3 SINE MIR 12 121 -87 1939 145 0 3 chr2 186687228 186687537 -66569046 + AluJb SINE Alu 1 308 0 1779 193 43 6 chr2 186687692 186688044 -66568539 + MLT1A1 LTR MaLR 1 365 0 193 318 16 0 chr2 186688092 186688155 -66568428 - L2 LINE L2 -217 3055 2992 416 286 43 36 chr2 186689260 186689400 -66567183 - MIR SINE MIR -119 143 3 202 353 15 0 chr2 186690215 186690283 -66566300 + L2 LINE L2 3245 3313 0 219 320 61 27 chr2 186690419 186690566 -66566017 + L2 LINE L2 2730 2881 -433 429 244 120 65 chr2 186690762 186690909 -66565674 - MIR SINE MIR 0 262 98 2310 108 0 0 chr2 186690909 186691205 -66565378 + AluSx SINE Alu 6 301 -11 429 244 120 65 chr2 186691205 186691274 -66565309 - MIR SINE MIR -164 98 34 2063 153 18 40 chr2 186691302 186691701 -66564882 + MLT1B LTR MaLR 1 390 0 513 269 157 5 chr2 186692006 186692229 -66564354 - L2 LINE L2 0 3313 3057 2396 57 0 0 chr2 186694223 186694528 -66562055 + AluY SINE Alu 1 305 0 562 229 72 7 chr2 186695044 186695197 -66561386 + L1ME LINE L1 5497 5659 -462 25 31 0 0 chr2 186695631 186695663 -66560920 + AT_rich Low_complexity Low_complexity 1 32 0 335 169 14 0 chr2 186696503 186696574 -66560009 + CT-rich Low_complexity Low_complexity 1 72 0 2050 135 14 0 chr2 186696576 186696865 -66559718 - AluSx SINE Alu -19 293 1 1064 138 6 0 chr2 186698472 186698646 -66557937 + L1MB3 LINE L1 6007 6181 -2 24 32 0 0 chr2 186699590 186699621 -66556962 + AT_rich Low_complexity Low_complexity 1 31 0 1909 95 24 0 chr2 186700265 186700518 -66556065 + AluSx SINE Alu 35 293 -19 646 122 0 19 chr2 186700528 186700635 -66555948 - FLAM_C SINE Alu 0 143 39 1628 167 3 52 chr2 186701149 186701334 -66555249 - AluJo SINE Alu -13 299 133 2295 103 0 0 chr2 186701334 186701634 -66554949 + AluSx SINE Alu 1 300 -12 1628 167 3 52 chr2 186701634 186701754 -66554829 - AluJo SINE Alu -179 133 9 250 282 24 35 chr2 186703205 186703290 -66553293 + MIR3 SINE MIR 119 202 -6 279 343 0 0 chr2 186704174 186704247 -66552336 + polypurine Low_complexity Low_complexity 3 75 0 1745 125 80 15 chr2 186706662 186706981 -66549602 - AluSg SINE Alu 0 338 3 282 255 0 75 chr2 186707173 186707267 -66549316 + MIR3 SINE MIR 108 194 -14 1196 200 84 9 chr2 186707270 186707615 -66548968 - Charlie5 DNA MER1_type 0 2624 2254 180 0 0 0 chr2 186708111 186708131 -66548452 + (A)n Simple_repeat Simple_repeat 1 20 0 226 346 137 20 chr2 186708392 186708545 -66548038 - L2 LINE L2 -376 2938 2768 2185 131 0 0 chr2 186709452 186709758 -66546825 + AluSx SINE Alu 1 306 -6 184 286 13 26 chr2 186709815 186709892 -66546691 + L3b LINE CR1 1182 1257 -326 1852 136 30 38 chr2 186711243 186711611 -66544972 - L1MB4 LINE L1 -2 6178 5814 25 0 0 0 chr2 186712714 186712739 -66543844 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr2 186713016 186713041 -66543542 + AT_rich Low_complexity Low_complexity 1 25 0 256 271 59 85 chr2 186714558 186714786 -66541797 + L1MCc LINE L1 1177 1394 -5029 2187 131 0 0 chr2 186714786 186715098 -66541485 + AluSx SINE Alu 1 312 0 256 271 59 85 chr2 186715098 186715223 -66541360 + L1MCc LINE L1 1394 1521 -4902 1483 319 192 32 chr2 186715663 186717001 -66539582 + L3 LINE CR1 2 1553 -24 329 0 0 24 chr2 186717773 186717815 -66538768 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 1486 158 3 76 chr2 186717818 186718122 -66538461 - AluJo SINE Alu -30 282 1 21 36 0 0 chr2 186718131 186718159 -66538424 + AT_rich Low_complexity Low_complexity 1 28 0 301 305 86 8 chr2 186718955 186719083 -66537500 + L2 LINE L2 2924 3061 -211 255 230 23 58 chr2 186719185 186719272 -66537311 - L2 LINE L2 -181 3091 3008 202 382 42 24 chr2 186719848 186720060 -66536523 - L2 LINE L2 -585 2729 2514 524 290 95 15 chr2 186720068 186720294 -66536289 + MIR SINE MIR 2 243 -19 864 261 46 8 chr2 186720654 186720944 -66535639 + L1MB8 LINE L1 5878 6184 0 278 270 132 29 chr2 186720953 186721127 -66535456 - L2 LINE L2 -1317 1997 1806 1286 126 0 30 chr2 186721196 186721394 -66535189 + AluJb SINE Alu 87 278 -34 234 0 0 0 chr2 186721394 186721420 -66535163 + (TC)n Simple_repeat Simple_repeat 1 26 0 * 423 0 0 0 chr2 186721419 186721466 -66535117 + (CA)n Simple_repeat Simple_repeat 1 47 0 2076 120 11 0 chr2 186721593 186721876 -66534707 + AluSp SINE Alu 1 286 -27 34 0 0 0 chr2 186721882 186721916 -66534667 + AT_rich Low_complexity Low_complexity 1 34 0 218 354 101 27 chr2 186722185 186722482 -66534101 - L2 LINE L2 -2052 1262 944 845 64 96 0 chr2 186722798 186722923 -66533660 + L1MA2 LINE L1 6168 6304 0 189 196 22 43 chr2 186723337 186723383 -66533200 - L3 LINE CR1 -12 1565 1521 875 220 35 131 chr2 186723751 186724261 -66532322 + MER4C LTR ERV1 5 465 0 22 35 0 0 chr2 186724886 186724915 -66531668 + AT_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr2 186724987 186725022 -66531561 + AT_rich Low_complexity Low_complexity 1 35 0 234 226 57 0 chr2 186727662 186727715 -66528868 - Tigger6 DNA MER2_type -1524 73 18 381 339 7 29 chr2 186730351 186730585 -66525998 - MIR SINE MIR -1 261 35 586 228 56 12 chr2 186730712 186730874 -66525709 - MIR SINE MIR -2 260 92 225 0 0 0 chr2 186731277 186731302 -66525281 + (TC)n Simple_repeat Simple_repeat 2 26 0 429 20 0 0 chr2 186733303 186733353 -66523230 + (CA)n Simple_repeat Simple_repeat 1 50 0 621 286 123 67 chr2 186733851 186734434 -66522149 + L1MDa LINE L1 1164 1764 -1137 457 269 31 16 chr2 186734587 186734780 -66521803 - L1ME4a LINE L1 -245 5876 5681 22 0 0 0 chr2 186736085 186736107 -66520476 + AT_rich Low_complexity Low_complexity 1 22 0 628 203 35 81 chr2 186736164 186736393 -66520190 + MIR SINE MIR 15 228 -34 375 320 235 20 chr2 186736426 186736835 -66519748 + L2 LINE L2 2817 3313 0 1252 225 127 36 chr2 186737543 186737960 -66518623 + MSTB2 LTR MaLR 3 457 0 1323 156 80 83 chr2 186738576 186738877 -66517706 + MER7A DNA MER2_type 49 346 0 272 215 152 0 chr2 186738971 186739050 -66517533 - MIR SINE MIR -70 192 102 21 0 0 0 chr2 186739600 186739621 -66516962 + AT_rich Low_complexity Low_complexity 1 21 0 240 226 161 0 chr2 186739941 186740003 -66516580 + MIR SINE MIR 102 173 -89 212 0 36 0 chr2 186740004 186740032 -66516551 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 1154 270 75 10 chr2 186740271 186740671 -66515912 + L1MEc LINE L1 22 447 -5949 15286 32 1 2 chr2 186740672 186743275 -66513308 + L1PA3 LINE L1 3552 6155 0 188 227 91 0 chr2 186746675 186746719 -66509864 - L2 LINE L2 -2 3270 3223 519 303 23 6 chr2 186746721 186746896 -66509687 - MIR SINE MIR -79 183 6 2259 107 0 16 chr2 186747215 186747525 -66509058 + AluSq SINE Alu 1 305 -8 2275 90 7 0 chr2 186747851 186748152 -66508431 - AluSg SINE Alu -7 303 1 181 338 108 0 chr2 186750799 186750873 -66505710 - L2 LINE L2 -3 3269 3188 723 262 98 13 chr2 186750904 186751129 -66505454 - MIR SINE MIR 0 262 19 205 279 115 3 chr2 186751271 186751363 -66505220 - MIR SINE MIR -63 145 75 295 296 84 21 chr2 186751732 186751874 -66504709 - L2 LINE L2 -2 3311 3161 241 312 93 93 chr2 186752535 186752836 -66503747 + L2 LINE L2 2965 3265 -7 430 252 0 29 chr2 186754324 186754427 -66502156 + L2 LINE L2 3214 3313 0 30 59 0 0 chr2 186754464 186754515 -66502068 + AT_rich Low_complexity Low_complexity 1 51 0 1688 152 44 27 chr2 186754565 186754862 -66501721 + AluJb SINE Alu 5 306 -6 25 90 0 0 chr2 186754987 186755054 -66501529 + AT_rich Low_complexity Low_complexity 1 67 0 1494 260 48 7 chr2 186755323 186755761 -66500822 + LTR40c LTR ERVL 5 460 -5 25 75 0 0 chr2 186756157 186756210 -66500373 + AT_rich Low_complexity Low_complexity 1 53 0 1721 186 10 3 chr2 186757788 186758084 -66498499 + AluJo SINE Alu 1 298 -14 1341 209 123 3 chr2 186758606 186758932 -66497651 + MLT1A1 LTR MaLR 1 365 0 413 62 231 0 chr2 186759406 186759471 -66497112 - MADE1 DNA Mariner 0 80 1 209 267 0 17 chr2 186760005 186760065 -66496518 - L2 LINE L2 0 3272 3214 1646 150 0 8 chr2 186760106 186760353 -66496230 + AluJb SINE Alu 7 251 -61 312 27 0 0 chr2 186760353 186760390 -66496193 + (CA)n Simple_repeat Simple_repeat 1 37 0 264 282 142 0 chr2 186760593 186760725 -66495858 - MIR SINE MIR -76 186 37 229 239 60 30 chr2 186760956 186761023 -66495560 + MIR SINE MIR 187 255 -7 358 243 10 19 chr2 186761225 186761328 -66495255 + MER103 DNA DNA 55 156 -10 921 258 18 9 chr2 186761837 186762058 -66494525 - MIR SINE MIR -25 237 15 2854 10 0 0 chr2 186762753 186763064 -66493519 - AluYa5 SINE Alu 0 311 1 23 0 0 0 chr2 186765371 186765394 -66491189 + AT_rich Low_complexity Low_complexity 1 23 0 274 356 10 0 chr2 186765699 186765803 -66490780 + MER5B DNA MER1_type 5 109 -69 197 299 90 49 chr2 186765714 186765858 -66490725 - MER5B DNA MER1_type -15 163 14 * 1415 109 66 23 chr2 186766341 186766598 -66489985 + L1MA5A LINE L1 6030 6297 0 282 336 16 39 chr2 186767230 186767358 -66489225 - L2 LINE L2 -182 3090 2966 245 286 65 52 chr2 186767869 186768023 -66488560 - L2 LINE L2 -2467 847 692 401 237 52 0 chr2 186769455 186769552 -66487031 + MER5A DNA MER1_type 11 112 -77 3895 224 18 10 chr2 186769686 186770656 -66485927 + L1MB5 LINE L1 4206 5182 -964 3887 190 43 12 chr2 186770659 186771473 -66485110 + L1MB5 LINE L1 5323 6161 -13 1857 153 30 3 chr2 186771544 186771844 -66484739 + AluSx SINE Alu 1 308 -4 369 264 35 49 chr2 186771881 186772025 -66484558 - MIR SINE MIR -72 190 49 240 284 102 23 chr2 186772120 186772296 -66484287 + L1ME4a LINE L1 5773 5962 -159 22 0 0 0 chr2 186772565 186772587 -66483996 + AT_rich Low_complexity Low_complexity 1 22 0 224 279 0 0 chr2 186772623 186772666 -66483917 + MER5B DNA MER1_type 105 147 -31 374 267 207 20 chr2 186773020 186773170 -66483413 - MER5A DNA MER1_type -2 187 10 189 381 72 14 chr2 186773268 186773407 -66483176 + L2 LINE L2 2614 2760 -554 610 227 8 162 chr2 186773407 186773654 -66482929 - MER102b DNA MER1_type -4 337 129 505 165 110 18 chr2 186773706 186773815 -66482768 + MER5B DNA MER1_type 59 177 -1 13475 187 16 14 chr2 186774781 186778378 -66478205 - L1PA14 LINE L1 -1 6160 2527 263 283 30 71 chr2 186778408 186778507 -66478076 - MIR SINE MIR -117 145 51 659 258 107 0 chr2 186778805 186778964 -66477619 + MER45A DNA AcHobo 2 177 -1 322 247 27 89 chr2 186779707 186779853 -66476730 + L1M4c LINE L1 1001 1137 -5247 207 379 0 0 chr2 186780375 186780441 -66476142 - L2 LINE L2 -13 3259 3194 273 311 67 0 chr2 186780585 186780675 -66475908 - L3 LINE CR1 -7 1570 1475 22 0 0 0 chr2 186781268 186781290 -66475293 + AT_rich Low_complexity Low_complexity 1 22 0 269 91 0 73 chr2 186781318 186781331 -66475252 + (A)n Simple_repeat Simple_repeat 1 13 -38 1129 266 3 26 chr2 186781331 186781639 -66474944 + AluJo SINE Alu 2 302 0 269 91 0 73 chr2 186781639 186781680 -66474903 + (A)n Simple_repeat Simple_repeat 13 51 0 520 220 61 15 chr2 186781832 186781964 -66474619 - AluJo SINE Alu -92 220 83 3257 128 13 17 chr2 186781964 186782505 -66474078 + L1MC1 LINE L1 5795 6333 0 559 302 39 54 chr2 186783731 186783989 -66472594 + MIR SINE MIR 9 262 0 420 309 113 16 chr2 186785048 186785242 -66471341 - MIR SINE MIR -48 214 2 234 0 0 0 chr2 186785516 186785542 -66471041 + (CA)n Simple_repeat Simple_repeat 1 26 0 27 49 0 0 chr2 186785986 186786027 -66470556 + AT_rich Low_complexity Low_complexity 1 41 0 1044 165 35 119 chr2 186787421 186787592 -66468991 + MER33 DNA MER1_type 1 130 -2455 1667 166 7 14 chr2 186787592 186787881 -66468702 + AluJb SINE Alu 11 297 -15 1044 165 35 119 chr2 186787881 186788054 -66468529 + MER33 DNA MER1_type 130 316 -8 2316 159 48 7 chr2 186788210 186788625 -66467958 + MSTB1 LTR MaLR 1 432 0 274 371 60 0 chr2 186788949 186789100 -66467483 - MIR SINE MIR -33 229 70 855 257 31 4 chr2 186791986 186792212 -66464371 - MIR SINE MIR -15 247 16 296 243 51 102 chr2 186792684 186792819 -66463764 + L1ME LINE L1 5478 5603 -518 2408 71 0 3 chr2 186792819 186793116 -66463467 + AluY SINE Alu 1 296 -15 296 243 51 102 chr2 186793116 186793157 -66463426 + L1ME LINE L1 5603 5645 -476 217 230 50 90 chr2 186793305 186793405 -66463178 - MIR SINE MIR -70 192 97 1948 128 7 7 chr2 186794667 186794980 -66461603 + AluSx SINE Alu 1 313 0 235 259 117 25 chr2 186795091 186795288 -66461295 + L1ME LINE L1 5708 5922 -199 655 187 67 33 chr2 186795696 186795846 -66460737 - MIR SINE MIR -89 173 19 1637 186 3 26 chr2 186795955 186796266 -66460317 - AluJb SINE Alu -8 304 1 2044 111 24 0 chr2 186796548 186796837 -66459746 - AluSp SINE Alu -17 296 1 370 274 80 9 chr2 186796889 186797002 -66459581 - MIR SINE MIR -6 256 136 2459 155 10 0 chr2 186797002 186797389 -66459194 + L1MC1 LINE L1 5413 5803 -530 1120 201 0 14 chr2 186797401 186797610 -66458973 - AluJb SINE Alu -24 288 83 2852 138 29 49 chr2 186797610 186798160 -66458423 + L1MC1 LINE L1 5795 6333 0 22 0 0 0 chr2 186798457 186798479 -66458104 + AT_rich Low_complexity Low_complexity 1 22 0 2219 41 0 0 chr2 186798699 186798968 -66457615 + L1PA5 LINE L1 5884 6152 -2 396 330 95 28 chr2 186799457 186799629 -66456954 + L2 LINE L2 3001 3201 -112 1086 173 32 36 chr2 186799629 186799849 -66456734 + MER20 DNA MER1_type 1 219 0 396 330 95 28 chr2 186799849 186799961 -66456622 + L2 LINE L2 3201 3304 -9 25 51 0 0 chr2 186801220 186801259 -66455324 + AT_rich Low_complexity Low_complexity 1 39 0 509 276 68 43 chr2 186801552 186801831 -66454752 - Charlie8 DNA MER1_type -2131 286 1 256 281 212 15 chr2 186801984 186802258 -66454325 + L2 LINE L2 2407 2734 -580 384 45 0 45 chr2 186802258 186802324 -66454259 + (TTTC)n Simple_repeat Simple_repeat 1 63 0 183 129 0 0 chr2 186802336 186802367 -66454216 + (CA)n Simple_repeat Simple_repeat 1 31 0 241 271 200 12 chr2 186802666 186802751 -66453832 + L2 LINE L2 3134 3234 -38 209 108 0 27 chr2 186803920 186803957 -66452626 + (CA)n Simple_repeat Simple_repeat 2 37 0 32372 98 14 59 chr2 186804997 186810592 -66445991 + L1PA7 LINE L1 12 5265 -889 2138 107 0 23 chr2 186810592 186810900 -66445683 + AluSg SINE Alu 1 301 -9 32372 98 14 59 chr2 186810900 186811751 -66444832 + L1PA7 LINE L1 5265 6153 -1 25 31 0 0 chr2 186811753 186811785 -66444798 + AT_rich Low_complexity Low_complexity 1 32 0 1787 176 37 0 chr2 186813492 186813787 -66442796 - AluJb SINE Alu -6 306 1 313 239 91 11 chr2 186814315 186814403 -66442180 + MIR SINE MIR 50 144 -118 266 269 23 134 chr2 186816748 186816919 -66439664 + MIR SINE MIR 6 157 -105 * 859 224 17 0 chr2 186816912 186817091 -66439492 - MIR SINE MIR 0 262 81 766 154 0 0 chr2 186817191 186817314 -66439269 + AluSp/q SINE Alu 188 310 -3 1490 209 3 19 chr2 186817320 186817641 -66438942 + L1MB5 LINE L1 5488 5803 -381 287 143 0 18 chr2 186817666 186817722 -66438861 + (GGAA)n Simple_repeat Simple_repeat 4 58 0 * 369 176 0 0 chr2 186817714 186817782 -66438801 + G-rich Low_complexity Low_complexity 5 72 0 1294 181 27 11 chr2 186817782 186818042 -66438541 + L1MB5 LINE L1 5824 6087 -87 2286 192 23 7 chr2 186818042 186818479 -66438104 + MER65C LTR ERV1 1 444 -17 550 113 0 0 chr2 186818491 186818571 -66438012 + L1MB5 LINE L1 6084 6163 -11 1830 157 38 3 chr2 186818631 186818974 -66437609 + L1MA4 LINE L1 5940 6294 -6 24 32 0 0 chr2 186818974 186819005 -66437578 + AT_rich Low_complexity Low_complexity 1 31 0 203 261 0 0 chr2 186819121 186819167 -66437416 + (CAT)n Simple_repeat Simple_repeat 3 48 0 627 199 55 0 chr2 186819211 186819357 -66437226 - L1ME LINE L1 -372 5790 5637 30 59 0 0 chr2 186819397 186819448 -66437135 + AT_rich Low_complexity Low_complexity 1 51 0 23 0 0 0 chr2 186819488 186819511 -66437072 + AT_rich Low_complexity Low_complexity 1 23 0 516 286 152 47 chr2 186819696 186819851 -66436732 + MLT1I LTR MaLR 63 200 -209 2741 88 3 11 chr2 186819851 186820227 -66436356 + THE1C LTR MaLR 1 373 -2 516 286 152 47 chr2 186820227 186820368 -66436215 + MLT1I LTR MaLR 200 390 -19 2148 130 48 22 chr2 186820378 186820733 -66435850 - THE1B LTR MaLR 0 364 1 11281 101 10 1 chr2 186820733 186822298 -66434285 - THE1B-int LTR MaLR 0 1580 1 1986 125 65 31 chr2 186822298 186822650 -66433933 - THE1B LTR MaLR 0 364 1 2139 109 31 0 chr2 186823231 186823525 -66433058 - AluSx SINE Alu -9 303 1 181 305 168 54 chr2 186825627 186825942 -66430641 + L2 LINE L2 1806 2156 -1158 363 386 92 12 chr2 186826408 186826887 -66429696 + L2 LINE L2 2458 2974 -340 325 188 99 20 chr2 186827092 186827193 -66429390 - L1ME4a LINE L1 -4 6117 6009 393 22 0 0 chr2 186827200 186827246 -66429337 + (CA)n Simple_repeat Simple_repeat 1 46 0 959 204 22 0 chr2 186827268 186827449 -66429134 + MER58 DNA MER1_type 1 185 -156 234 62 0 0 chr2 186828237 186828269 -66428314 + (TTCA)n Simple_repeat Simple_repeat 2 33 0 194 250 96 0 chr2 186828270 186828322 -66428261 - L2 LINE L2 -13 3259 3203 270 294 73 79 chr2 186828709 186828886 -66427697 + MER5B DNA MER1_type 1 176 -2 1046 123 0 0 chr2 186828953 186829107 -66427476 - L1PA15 LINE L1 -2 6163 6010 2349 116 11 30 chr2 186829108 186829478 -66427105 + THE1B LTR MaLR 2 364 0 11484 95 21 1 chr2 186829478 186831021 -66425562 + THE1B-int LTR MaLR 1 1574 -6 2164 137 11 50 chr2 186831026 186831209 -66425374 + THE1B LTR MaLR 1 163 -201 2462 76 0 10 chr2 186831209 186831523 -66425060 + AluY SINE Alu 1 311 0 2164 137 11 50 chr2 186831523 186831718 -66424865 + THE1B LTR MaLR 163 364 0 683 139 8 0 chr2 186831718 186831841 -66424742 - L1PA15 LINE L1 -151 6014 5891 186 391 16 16 chr2 186832259 186832387 -66424196 + L2 LINE L2 1791 1918 -1396 374 289 167 6 chr2 186833194 186833350 -66423233 + MIR SINE MIR 82 262 0 23 0 0 0 chr2 186834031 186834054 -66422529 + AT_rich Low_complexity Low_complexity 1 23 0 636 212 148 5 chr2 186834843 186835060 -66421523 + MER33 DNA MER1_type 1 248 -76 1316 235 63 5 chr2 186835060 186835472 -66421111 - L1M4 LINE L1 -2702 3444 3009 186 0 88 0 chr2 186836842 186836876 -66419707 + (TA)n Simple_repeat Simple_repeat 1 37 0 1063 180 5 5 chr2 186837128 186837317 -66419266 - MER2 DNA MER2_type -155 190 2 263 241 58 11 chr2 186837690 186837777 -66418806 - MLT1L LTR MaLR -13 602 512 1931 80 11 0 chr2 186837886 186838150 -66418433 + L1PA13 LINE L1 5689 5955 -208 231 315 138 21 chr2 186838285 186838574 -66418009 - L1ME LINE L1 -461 5660 5338 1388 247 135 11 chr2 186839134 186839592 -66416991 - MLT1G1 LTR MaLR 0 595 81 511 255 60 109 chr2 186839708 186840057 -66416526 - L1ME4a LINE L1 -241 5880 5549 22 35 0 0 chr2 186840397 186840426 -66416157 + AT_rich Low_complexity Low_complexity 1 29 0 2138 119 7 0 chr2 186841018 186841313 -66415270 - AluSx SINE Alu -15 297 1 791 277 97 0 chr2 186842521 186842759 -66413824 + MIR SINE MIR 2 262 0 2068 124 0 3 chr2 186843931 186844230 -66412353 - AluSx SINE Alu -14 298 1 1652 121 102 4 chr2 186844827 186845106 -66411477 - AluSx SINE Alu 0 306 3 305 344 33 8 chr2 186845603 186845725 -66410858 + L3 LINE CR1 1447 1571 -6 248 286 91 63 chr2 186846271 186846446 -66410137 + MLT1K LTR MaLR 201 380 -208 25 0 0 0 chr2 186846832 186846857 -66409726 + AT_rich Low_complexity Low_complexity 1 25 0 192 268 36 0 chr2 186847463 186847519 -66409064 - L2 LINE L2 -2 3311 3254 500 296 25 19 chr2 186847708 186847867 -66408716 - MER5B DNA MER1_type -16 162 3 235 380 22 63 chr2 186848062 186848333 -66408250 + L2 LINE L2 2716 2975 -339 1986 183 21 28 chr2 186848520 186848946 -66407637 - L1PB1 LINE L1 -5144 1719 1297 14488 194 17 15 chr2 186848951 186850075 -66406508 + L1PB1 LINE L1 1718 2838 -4029 2167 120 0 3 chr2 186850075 186850367 -66406216 + AluSg SINE Alu 1 291 -19 14488 194 17 15 chr2 186850367 186852888 -66403695 + L1PB1 LINE L1 2838 5428 -1439 2328 77 30 10 chr2 186852888 186853186 -66403397 + AluY SINE Alu 5 308 -3 14488 194 17 15 chr2 186853186 186854249 -66402334 + L1PB1 LINE L1 5428 6487 -380 246 122 0 0 chr2 186854253 186854302 -66402281 - LTR66 LTR ERVL -158 452 404 285 70 76 44 chr2 186854314 186854472 -66402111 + (CATAT)n Simple_repeat Simple_repeat 4 166 0 427 112 2 87 chr2 186854485 186855111 -66401472 + (TA)n Simple_repeat Simple_repeat 1 572 0 270 75 75 15 chr2 186855112 186855179 -66401404 + (CATAT)n Simple_repeat Simple_repeat 5 75 0 2289 133 5 5 chr2 186855181 186855549 -66401034 + L1PB1 LINE L1 6497 6864 -3 209 363 49 10 chr2 186855733 186855835 -66400748 + L2 LINE L2 3199 3304 -9 406 354 39 6 chr2 186857967 186858148 -66398435 + L3 LINE CR1 1137 1323 -254 203 300 0 0 chr2 186858148 186858198 -66398385 - L3 LINE CR1 -239 1338 1289 408 306 18 0 chr2 186860033 186860144 -66396439 - L2 LINE L2 0 3272 3160 206 310 0 11 chr2 186860603 186860690 -66395893 + (TG)n Simple_repeat Simple_repeat 1 86 0 22 35 0 0 chr2 186861160 186861189 -66395394 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 186862098 186862119 -66394464 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 186862231 186862254 -66394329 + AT_rich Low_complexity Low_complexity 1 23 0 241 290 95 21 chr2 186864812 186865095 -66391488 + L1M4 LINE L1 2131 2434 -3712 21 36 0 0 chr2 186865323 186865351 -66391232 + AT_rich Low_complexity Low_complexity 1 28 0 449 277 87 61 chr2 186865469 186865537 -66391046 + L1M4 LINE L1 5 70 -6472 2040 81 0 4 chr2 186865537 186865797 -66390786 + AluY SINE Alu 40 298 -13 449 277 87 61 chr2 186865797 186865959 -66390624 + L1M4 LINE L1 70 241 -6301 * 4597 237 23 35 chr2 186865957 186866064 -66390519 + L1M4 LINE L1 2681 2788 -3856 762 136 27 68 chr2 186866064 186866211 -66390372 + L1MA9 LINE L1 6168 6308 -4 4597 237 23 35 chr2 186866211 186866967 -66389616 + L1M4 LINE L1 2788 3523 -3121 369 62 0 0 chr2 186866967 186867015 -66389568 + (TA)n Simple_repeat Simple_repeat 1 48 0 4597 237 23 35 chr2 186867015 186867565 -66389018 + L1M4 LINE L1 3523 4078 -2566 953 217 26 4 chr2 186867559 186867785 -66388798 + L1M4 LINE L1 4760 4990 -1654 * 43232 38 21 1 chr2 186867782 186873813 -66382770 + L1PA3 LINE L1 1 6155 0 3740 210 14 30 chr2 186873823 186874642 -66381941 + L1M4 LINE L1 4975 5786 -886 2089 128 0 0 chr2 186874642 186874975 -66381608 + AluSx SINE Alu 1 333 0 3740 210 14 30 chr2 186874975 186875180 -66381403 + L1M4 LINE L1 5786 5993 -679 630 119 30 10 chr2 186875188 186875289 -66381294 + AluSp SINE Alu 2 104 -209 3241 92 8 47 chr2 186875389 186875692 -66380891 - L1P4 LINE L1 -392 5782 5505 1472 58 0 92 chr2 186875692 186875928 -66380655 - AluY SINE Alu 0 311 95 3241 92 8 47 chr2 186875928 186876133 -66380450 - L1P4 LINE L1 -669 5505 5293 14250 154 39 16 chr2 186876147 186876985 -66379598 + L1P LINE L1 2086 2904 -3242 2019 133 14 14 chr2 186876985 186877278 -66379305 - AluSx SINE Alu -19 293 1 14250 154 39 16 chr2 186877278 186879045 -66377538 + L1P LINE L1 2904 4749 -1397 6830 24 1 1 chr2 186879641 186880390 -66376193 - L1PA3 LINE L1 0 6155 5407 575 29 0 0 chr2 186880390 186880460 -66376123 + L1P LINE L1 5317 5386 -769 534 273 93 7 chr2 186880894 186881044 -66375539 + MER45C DNA AcHobo 52 214 -739 600 204 369 0 chr2 186881176 186881352 -66375231 + MER45C DNA AcHobo 713 953 0 23 0 0 0 chr2 186882038 186882061 -66374522 + AT_rich Low_complexity Low_complexity 1 23 0 276 130 0 0 chr2 186884191 186884237 -66372346 + (T)n Simple_repeat Simple_repeat 1 46 0 2547 87 124 10 chr2 186886217 186886619 -66369964 - LTR7 LTR ERV1 -2 448 1 2315 106 56 13 chr2 186886619 186886995 -66369588 - HERVH LTR ERV1 0 7713 7322 1410 134 19 0 chr2 186886993 186887209 -66369374 - HERVH LTR ERV1 -1894 5819 5600 * 4293 157 3 1 chr2 186887210 186887872 -66368711 - HERVH LTR ERV1 -2564 5149 4487 6264 84 5 2 chr2 186887873 186888725 -66367858 - HERVH LTR ERV1 -3720 3993 3140 * 16029 95 25 20 chr2 186888704 186891560 -66365023 - HERVH LTR ERV1 -4718 2995 1 2121 100 58 22 chr2 186891562 186891954 -66364629 - LTR7 LTR ERV1 -2 448 1 489 156 26 0 chr2 186892169 186892246 -66364337 + AluJ/FLAM SINE Alu 2 80 -232 513 188 0 0 chr2 186892248 186892328 -66364255 + AluSc SINE Alu 120 199 -110 4446 101 32 19 chr2 186892328 186892960 -66363623 - MER51C LTR ERV1 0 640 1 491 186 12 0 chr2 186892964 186893050 -66363533 - MER51A LTR ERV1 -547 87 1 777 124 9 0 chr2 186893051 186893164 -66363419 + FRAM SINE Alu 63 176 0 1276 208 66 4 chr2 186894512 186894786 -66361797 + L1PB4 LINE L1 5866 6156 0 285 311 0 0 chr2 186894842 186894932 -66361651 - MIR SINE MIR 0 262 173 204 200 0 0 chr2 186894968 186895003 -66361580 + (CA)n Simple_repeat Simple_repeat 2 36 0 190 361 41 21 chr2 186895150 186895247 -66361336 + L2 LINE L2 2944 3042 -230 931 79 40 59 chr2 186895273 186895425 -66361158 - LTR7 LTR ERV1 0 450 302 808 138 7 14 chr2 186895657 186895795 -66360788 - LTR7 LTR ERV1 -313 137 1 44727 39 3 2 chr2 186895813 186901958 -66354625 - L1PA3 LINE L1 0 6155 3 2556 144 44 2 chr2 186902028 186902439 -66354144 + MSTA LTR MaLR 1 428 0 244 333 27 0 chr2 186902563 186902638 -66353945 + MIR SINE MIR 161 237 -25 462 281 39 33 chr2 186902756 186902909 -66353674 - L2 LINE L2 0 3313 3160 550 246 15 8 chr2 186903150 186903280 -66353303 + MIR SINE MIR 103 233 -29 1001 283 82 64 chr2 186903729 186903876 -66352707 - L2 LINE L2 0 3313 3170 1438 200 10 26 chr2 186903876 186904186 -66352397 + AluJo SINE Alu 1 305 -7 1001 283 82 64 chr2 186904186 186904539 -66352044 - L2 LINE L2 -143 3170 2804 474 269 15 8 chr2 186904552 186904682 -66351901 - MER94 DNA DNA -3 131 1 300 273 122 29 chr2 186904686 186904825 -66351758 - L2 LINE L2 -517 2797 2646 2120 141 7 0 chr2 186906176 186906475 -66350108 + AluSx SINE Alu 1 301 -11 378 0 0 0 chr2 186906475 186906517 -66350066 + (TCTA)n Simple_repeat Simple_repeat 4 45 0 338 288 9 128 chr2 186906997 186907216 -66349367 - MIR SINE MIR -7 255 63 2051 142 42 58 chr2 186907736 186908117 -66348466 + THE1C LTR MaLR 1 375 0 3873 123 30 13 chr2 186908122 186908725 -66347858 + HERVL LTR ERVL 5 617 -5037 1097 237 45 39 chr2 186908725 186909071 -66347512 + MLT2B3 LTR ERVL 212 554 0 272 148 49 16 chr2 186910022 186910083 -66346500 - L1MA3 LINE L1 0 6305 6243 915 138 36 0 chr2 186910087 186910225 -66346358 - L1MA2 LINE L1 -4 7719 7577 16916 127 21 76 chr2 186910240 186912867 -66343716 + L1P LINE L1 12 2782 -3364 2412 86 0 3 chr2 186912867 186913169 -66343414 + AluY SINE Alu 1 301 -10 16916 127 21 76 chr2 186913169 186913930 -66342653 + L1P LINE L1 2782 3061 -3085 2224 121 0 0 chr2 186913930 186914235 -66342348 + AluY SINE Alu 1 305 -6 16916 127 21 76 chr2 186914235 186914973 -66341610 + L1P LINE L1 3061 3838 -2308 7019 55 0 11 chr2 186914973 186916140 -66340443 + L1PA7 LINE L1 4990 6148 -6 11071 157 19 17 chr2 186916142 186916325 -66340258 - L1MA2 LINE L1 -148 7575 7394 2718 96 8 8 chr2 186916325 186916700 -66339883 - THE1C LTR MaLR 0 375 1 10405 107 36 9 chr2 186916700 186918239 -66338344 - THE1C-int LTR MaLR 0 1580 1 2779 91 5 3 chr2 186918239 186918613 -66337970 - THE1C LTR MaLR 0 375 1 11071 157 19 17 chr2 186918613 186920788 -66335795 - L1MA2 LINE L1 -329 7394 5209 2481 79 0 0 chr2 186920788 186921093 -66335490 - AluY SINE Alu -6 305 1 11071 157 19 17 chr2 186921093 186921978 -66334605 - L1MA2 LINE L1 -2514 5209 4327 40066 41 1 4 chr2 186922019 186927972 -66328611 - L1PA4 LINE L1 -3 6152 221 1921 95 7 7 chr2 186928072 186928346 -66328237 + L1PA11 LINE L1 5901 6174 0 280 280 68 7 chr2 186928426 186928522 -66328061 + MIR3 SINE MIR 80 160 -48 259 284 14 14 chr2 186929129 186929203 -66327380 + MIR SINE MIR 91 164 -98 4546 154 17 23 chr2 186930168 186931183 -66325400 - L1MB4 LINE L1 -1 6179 5170 1181 144 81 123 chr2 186933979 186934028 -66322555 + MER82 DNA MER2_type 305 355 -298 2232 97 7 0 chr2 186934028 186934327 -66322256 - AluSp SINE Alu -12 301 1 1639 175 17 31 chr2 186934329 186934621 -66321962 - AluJo SINE Alu -20 292 5 1181 144 81 123 chr2 186934621 186934902 -66321681 + MER82 DNA MER2_type 356 624 -29 182 269 26 51 chr2 186935448 186935526 -66321057 + L2 LINE L2 3234 3309 -4 1625 148 48 100 chr2 186936751 186936917 -66319666 - LTR47A LTR ERVL -55 397 224 4668 143 41 15 chr2 186936917 186937722 -66318861 + LTR1B LTR ERV1 1 826 0 1625 148 48 100 chr2 186937722 186937974 -66318609 - LTR47A LTR ERVL -228 224 1 616 97 0 43 chr2 186938220 186938313 -66318270 + AluJ/FLAM SINE Alu 1 89 -223 1369 128 0 5 chr2 186940009 186940220 -66316363 - L1P LINE L1 -5936 210 1 17034 162 46 49 chr2 186940222 186944555 -66312028 - L1MA2 LINE L1 -3227 4338 19 482 259 15 30 chr2 186944605 186944736 -66311847 - L2 LINE L2 -9 3304 3176 354 290 143 27 chr2 186944731 186944955 -66311628 - MIR SINE MIR 0 262 13 * 433 280 78 50 chr2 186945699 186945981 -66310602 + L1ME3A LINE L1 4739 5028 -1118 360 311 91 24 chr2 186946155 186946409 -66310174 + L1ME3A LINE L1 5255 5525 -2283 3374 33 0 0 chr2 186946433 186946831 -66309752 - L1PA3 LINE L1 -2 6153 5756 649 258 99 34 chr2 186946867 186947189 -66309394 + L1ME3A LINE L1 5558 5900 -221 636 253 149 0 chr2 186947686 186947840 -66308743 + MER5A DNA MER1_type 13 189 0 1458 214 173 28 chr2 186950032 186950536 -66306047 + L1ME2 LINE L1 5569 6145 -19 189 342 158 5 chr2 186951165 186951349 -66305234 - L3b LINE CR1 -24 1559 1348 196 271 0 21 chr2 186952452 186952500 -66304083 - MIR SINE MIR -184 78 32 189 246 0 70 chr2 186954745 186954802 -66301781 - L2 LINE L2 -997 2317 2265 377 323 107 20 chr2 186954996 186955296 -66301287 - L2 LINE L2 -1321 1993 1668 38 61 0 0 chr2 186955353 186955419 -66301164 + AT_rich Low_complexity Low_complexity 1 66 0 492 282 74 20 chr2 186957164 186957313 -66299270 - MIR3 SINE MIR -7 201 45 763 234 84 35 chr2 186958016 186958242 -66298341 - MIR SINE MIR -21 241 5 2445 63 3 0 chr2 186958375 186958675 -66297908 - AluY SINE Alu -10 301 1 416 255 39 59 chr2 186958810 186958963 -66297620 + MIR SINE MIR 5 154 -108 21 0 0 0 chr2 186959949 186959970 -66296613 + AT_rich Low_complexity Low_complexity 1 21 0 711 97 0 0 chr2 186960445 186960538 -66296045 + AluY SINE Alu 205 297 -14 418 232 62 57 chr2 186960595 186960772 -66295811 + L1ME3A LINE L1 5988 6165 -5 1654 207 3 3 chr2 186962122 186962417 -66294166 + AluJo SINE Alu 1 295 -17 2185 114 0 0 chr2 186962648 186962945 -66293638 + AluSx SINE Alu 1 297 -15 962 211 0 0 chr2 186964638 186964794 -66291789 - FRAM SINE Alu -23 153 1 21 0 0 0 chr2 186965207 186965228 -66291355 + AT_rich Low_complexity Low_complexity 1 21 0 287 320 26 78 chr2 186965510 186965663 -66290920 - L2 LINE L2 -190 3082 2938 483 174 11 22 chr2 186966101 186966193 -66290390 + THE1C LTR MaLR 2 92 -336 * 802 117 86 0 chr2 186966192 186966320 -66290263 + THE1C LTR MaLR 235 373 -2 1592 139 139 51 chr2 186966327 186966605 -66289978 + MSTA LTR MaLR 68 382 -46 2032 118 4 0 chr2 186966605 186966909 -66289674 + AluSg SINE Alu 1 305 0 1592 139 139 51 chr2 186966909 186966961 -66289622 + MSTA LTR MaLR 382 428 0 2096 111 0 19 chr2 186969264 186969571 -66287012 + AluSx SINE Alu 1 301 -11 3193 264 177 82 chr2 186971370 186972194 -66284389 + L2 LINE L2 300 1045 -2268 402 200 30 10 chr2 186972194 186972294 -66284289 - U13 snRNA snRNA -2 102 1 3193 264 177 82 chr2 186972294 186972749 -66283834 + L2 LINE L2 1045 1456 -1857 276 189 0 0 chr2 186972749 186972802 -66283781 + L1ME3 LINE L1 6110 6162 0 3193 264 177 82 chr2 186972802 186974014 -66282569 + L2 LINE L2 1456 3086 -227 284 297 178 0 chr2 186974015 186974116 -66282467 + L2 LINE L2 3190 3308 -5 1045 203 10 10 chr2 186974166 186974373 -66282210 + MER20 DNA MER1_type 12 218 -1 501 306 70 6 chr2 186974686 186974843 -66281740 + MER5A DNA MER1_type 21 187 -2 2306 100 0 0 chr2 186975104 186975413 -66281170 + AluSc SINE Alu 1 309 0 497 204 72 59 chr2 186976526 186976678 -66279905 - L1MC5 LINE L1 -58 7903 7750 209 351 0 13 chr2 186976933 186977010 -66279573 + MIR3 SINE MIR 120 195 -13 24 0 0 0 chr2 186977275 186977299 -66279284 + AT_rich Low_complexity Low_complexity 1 24 0 573 310 21 11 chr2 186979390 186979577 -66277006 - MIR3 SINE MIR 0 208 20 22 0 0 0 chr2 186980436 186980458 -66276125 + AT_rich Low_complexity Low_complexity 1 22 0 1149 187 84 59 chr2 186980503 186980824 -66275759 - MER2 DNA MER2_type -14 331 3 879 196 13 7 chr2 186981712 186982250 -66274333 + L1 LINE L1 4415 5030 -1116 2431 81 0 0 chr2 186982250 186982558 -66274025 + AluY SINE Alu 1 308 -3 25 0 0 0 chr2 186983067 186983092 -66273491 + AT_rich Low_complexity Low_complexity 1 25 0 1545 190 35 0 chr2 186983417 186983701 -66272882 + AluJo SINE Alu 1 294 -18 2328 84 7 0 chr2 186984011 186984309 -66272274 + AluSg SINE Alu 1 300 -10 526 279 77 24 chr2 186984374 186984621 -66271962 - MIR SINE MIR -2 260 1 384 233 47 40 chr2 186985656 186985806 -66270777 + L1MCc LINE L1 51 201 -6222 * 468 279 89 5 chr2 186985804 186985976 -66270607 + L1ME1 LINE L1 5990 6164 0 327 313 90 25 chr2 186986243 186986678 -66269905 + L1M4 LINE L1 2985 3447 -2699 791 249 30 90 chr2 186986987 186987433 -66269150 + L1MC5 LINE L1 6625 7021 -940 1388 190 51 0 chr2 186987437 186987690 -66268893 + AluJo SINE Alu 3 268 -44 374 148 0 50 chr2 186987698 186987799 -66268784 + (GGAA)n Simple_repeat Simple_repeat 2 97 0 1209 219 110 21 chr2 186987809 186988192 -66268391 + L1MC5 LINE L1 7027 7443 -518 369 244 131 18 chr2 186988254 186988422 -66268161 + L1M4 LINE L1 2639 2825 -3321 1488 134 9 17 chr2 186988457 186988689 -66267894 - AluSx SINE Alu -82 230 1 980 193 0 0 chr2 186988943 186989104 -66267479 + FRAM SINE Alu 1 161 -15 2437 104 0 21 chr2 186989216 186989592 -66266991 - L1PB1 LINE L1 -2 6149 5782 244 219 0 0 chr2 186989601 186989665 -66266918 + L1MC4 LINE L1 6640 6703 -1339 3704 129 21 3 chr2 186989672 186990577 -66266006 - L1P5 LINE L1 -361 5790 4872 1884 171 11 0 chr2 186990583 186990962 -66265621 + L1M4 LINE L1 4378 4760 -1386 405 95 16 0 chr2 186991048 186991111 -66265472 - L1 LINE L1 -1312 4834 4771 23 0 0 0 chr2 186992073 186992096 -66264487 + AT_rich Low_complexity Low_complexity 1 23 0 2019 121 14 7 chr2 186993341 186993630 -66262953 - AluSq SINE Alu -22 291 1 38 22 0 0 chr2 186993929 186993974 -66262609 + AT_rich Low_complexity Low_complexity 1 45 0 1326 181 71 35 chr2 186994413 186994695 -66261888 - AluJo SINE Alu -20 292 1 1975 82 0 4 chr2 186994892 186995149 -66261434 + AluSc SINE Alu 39 294 -15 26 82 0 0 chr2 186995703 186995764 -66260819 + AT_rich Low_complexity Low_complexity 1 61 0 2265 88 3 19 chr2 186996179 186996486 -66260097 + AluSg SINE Alu 1 302 -8 810 214 84 38 chr2 186996515 186996777 -66259806 + LTR37B LTR ERV1 195 468 0 27 29 0 0 chr2 186997016 186997050 -66259533 + AT_rich Low_complexity Low_complexity 1 34 0 27 0 0 0 chr2 186998403 186998430 -66258153 + AT_rich Low_complexity Low_complexity 1 27 0 880 278 60 57 chr2 186999325 186999872 -66256711 + L1MCc LINE L1 26 574 -5849 2607 252 96 35 chr2 187000010 187001232 -66255351 + L1MCc LINE L1 816 1961 -4980 2070 114 17 3 chr2 187001232 187001530 -66255053 - AluSx SINE Alu -8 304 3 2607 252 96 35 chr2 187001530 187001550 -66255033 + L1MCc LINE L1 1961 1978 -4963 2363 169 26 12 chr2 187001550 187001976 -66254607 + Tigger2a DNA MER2_type 1 432 -2 2607 252 96 35 chr2 187001976 187003173 -66253410 + L1MCc LINE L1 1978 3569 -3372 2132 103 27 0 chr2 187003174 187003466 -66253117 + AluSp SINE Alu 1 300 -13 1059 191 31 123 chr2 187003493 187003906 -66252677 + L1M4 LINE L1 4971 5345 -801 489 202 21 0 chr2 187003919 187004013 -66252570 + MER21B LTR ERV1 1 96 -767 1205 250 30 35 chr2 187004021 187004515 -66252068 + MER21B LTR ERV1 20 566 -297 438 222 132 24 chr2 187004537 187004704 -66251879 + L1ME1 LINE L1 5974 6158 -8 264 326 149 0 chr2 187006289 187006430 -66250153 + L2 LINE L2 2484 2645 -669 1150 266 78 54 chr2 187006430 187006987 -66249596 + L2 LINE L2 2748 3313 0 364 329 79 6 chr2 187006966 187007130 -66249453 - MIR SINE MIR -59 203 28 * 664 254 6 35 chr2 187007159 187007328 -66249255 - MER58B DNA MER1_type -2 339 176 22 35 0 0 chr2 187007375 187007404 -66249179 + AT_rich Low_complexity Low_complexity 1 29 0 1408 169 69 0 chr2 187008173 187008434 -66248149 + AluJo SINE Alu 21 299 -13 245 239 11 57 chr2 187008641 187008729 -66247854 + MIR SINE MIR 161 244 -18 23 33 0 0 chr2 187008829 187008859 -66247724 + AT_rich Low_complexity Low_complexity 1 30 0 219 189 0 0 chr2 187009232 187009269 -66247314 - L2 LINE L2 -10 3303 3267 188 167 0 0 chr2 187010319 187010349 -66246234 + MIR SINE MIR 115 144 -118 2742 159 16 2 chr2 187011192 187011690 -66244893 + L1MB7 LINE L1 5666 6170 -14 665 194 8 22 chr2 187011823 187011957 -66244626 + FLAM_C SINE Alu 1 132 -1 200 388 97 0 chr2 187013050 187013184 -66243399 + L2 LINE L2 3116 3262 -10 816 267 107 1 chr2 187013186 187013569 -66243014 + L2 LINE L2 2713 3155 -158 506 309 63 0 chr2 187015046 187015221 -66241362 + MIR3 SINE MIR 18 203 -5 22 0 0 0 chr2 187015460 187015482 -66241101 + AT_rich Low_complexity Low_complexity 1 22 0 228 35 0 0 chr2 187015724 187015753 -66240830 + (CA)n Simple_repeat Simple_repeat 2 30 0 552 257 23 69 chr2 187015784 187015959 -66240624 + MER5B DNA MER1_type 2 168 -10 27 0 0 0 chr2 187016132 187016159 -66240424 + AT_rich Low_complexity Low_complexity 1 27 0 469 219 29 58 chr2 187017166 187017303 -66239280 + FLAM_A SINE Alu 1 133 0 405 198 0 0 chr2 187017307 187017398 -66239185 + GA-rich Low_complexity Low_complexity 2 92 0 387 296 98 33 chr2 187018496 187018705 -66237878 + L1MC/D LINE L1 5465 5681 -481 189 169 58 19 chr2 187018791 187018945 -66237638 + (TATAA)n Simple_repeat Simple_repeat 5 164 0 * 368 79 73 43 chr2 187018921 187019085 -66237498 + (TA)n Simple_repeat Simple_repeat 1 169 0 506 134 47 23 chr2 187019140 187019311 -66237272 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 263 183 84 0 chr2 187019311 187019382 -66237201 + (TATAG)n Simple_repeat Simple_repeat 2 78 0 339 150 46 46 chr2 187019388 187019561 -66237022 + (TATAA)n Simple_repeat Simple_repeat 5 177 0 939 45 0 0 chr2 187020159 187020270 -66236313 - AluY SINE Alu -9 302 192 327 278 0 0 chr2 187020270 187020342 -66236241 + U3 snRNA snRNA 15 86 -131 9838 199 77 76 chr2 187020345 187020817 -66235766 + L1PA16 LINE L1 1734 2204 -3962 1811 165 0 29 chr2 187020817 187021126 -66235457 + AluJo SINE Alu 1 300 -12 9838 199 77 76 chr2 187021126 187021877 -66234706 + L1PA16 LINE L1 2204 2952 -3214 1246 222 0 24 chr2 187021877 187022125 -66234458 + AluJb SINE Alu 48 289 -23 9838 199 77 76 chr2 187022125 187025076 -66231507 + L1PA16 LINE L1 2952 6164 -2 1140 197 5 22 chr2 187025418 187025641 -66230942 - MER20 DNA MER1_type 0 219 1 222 203 17 34 chr2 187025671 187025730 -66230853 + L2 LINE L2 3256 3313 0 413 254 36 0 chr2 187027046 187027156 -66229427 - MIR SINE MIR -1 261 148 1074 247 44 36 chr2 187027158 187027582 -66229001 + MER83B-int LTR ERV1 628 1051 -3845 1582 303 50 28 chr2 187027633 187028466 -66228117 + MER83B-int LTR ERV1 1030 1881 -3073 1037 198 6 6 chr2 187028439 187028621 -66227962 + MER83B-int LTR ERV1 1029 1210 -3670 * 1752 141 60 54 chr2 187028621 187028989 -66227594 + THE1C LTR MaLR 2 371 -4 2603 124 2 26 chr2 187028994 187029421 -66227162 + MER83B-int LTR ERV1 3841 4257 -623 41117 42 27 1 chr2 187029421 187035435 -66221148 + L1PA3 LINE L1 3 6177 0 3133 176 25 60 chr2 187035435 187036510 -66220073 + MER83B-int LTR ERV1 3207 4874 -6 1860 143 131 3 chr2 187036516 187036851 -66219732 + MER83B LTR ERV1 1 378 0 294 143 0 0 chr2 187036851 187036900 -66219683 + FLAM SINE Alu 70 118 -15 981 270 41 50 chr2 187036925 187037243 -66219340 + MER21B LTR ERV1 322 636 -227 671 149 8 8 chr2 187037282 187037403 -66219180 + FLAM_A SINE Alu 20 140 -2 596 225 89 30 chr2 187037403 187037572 -66219011 + MER21B LTR ERV1 628 806 -57 1786 99 15 0 chr2 187037630 187037892 -66218691 + LTR56 LTR ERV1 9 274 -171 1312 123 137 0 chr2 187037900 187038127 -66218456 + LTR56 LTR ERV1 188 445 0 853 144 20 0 chr2 187038161 187038307 -66218276 - Charlie1a DNA MER1_type -1257 198 50 17713 155 41 11 chr2 187039607 187045086 -66211497 + L1PB1 LINE L1 1 5645 -1217 231 88 0 0 chr2 187045096 187045130 -66211453 + (CA)n Simple_repeat Simple_repeat 1 34 0 2353 110 3 14 chr2 187045131 187045494 -66211089 + L1PB1 LINE L1 6509 6867 0 36367 91 15 9 chr2 187045506 187051615 -66204968 + L1PA6 LINE L1 11 6152 -2 22 35 0 0 chr2 187053766 187053795 -66202788 + AT_rich Low_complexity Low_complexity 1 29 0 1977 157 3 0 chr2 187054881 187055175 -66201408 + AluSx SINE Alu 1 295 -17 300 230 286 16 chr2 187055543 187055669 -66200914 + MIR SINE MIR 49 208 -54 1580 309 88 51 chr2 187057597 187057881 -66198702 + L2 LINE L2 982 1254 -2060 2360 138 17 56 chr2 187057881 187058076 -66198507 + MER65A LTR ERV1 1 202 -243 1477 142 0 26 chr2 187058076 187058309 -66198274 + AluJb SINE Alu 86 312 0 2360 138 17 56 chr2 187058309 187058576 -66198007 + MER65A LTR ERV1 202 445 0 1580 309 88 51 chr2 187058576 187058786 -66197797 + L2 LINE L2 1254 1455 -1859 3503 114 40 34 chr2 187058786 187059381 -66197202 + LTR26 LTR ERV1 1 599 -4 1580 309 88 51 chr2 187059381 187059611 -66196972 + L2 LINE L2 1455 1675 -1639 1760 124 68 91 chr2 187059611 187060007 -66196576 + MLT1B LTR MaLR 4 390 0 1580 309 88 51 chr2 187060007 187060619 -66195964 + L2 LINE L2 1675 2370 -944 500 320 47 74 chr2 187060951 187061207 -66195376 - MIR SINE MIR -13 249 1 786 212 57 57 chr2 187061487 187061680 -66194903 + MER58A DNA MER1_type 24 216 -8 218 167 0 42 chr2 187061816 187061864 -66194719 + GA-rich Low_complexity Low_complexity 2 47 0 213 252 99 18 chr2 187061876 187061987 -66194596 - MIR SINE MIR -141 121 2 276 344 130 26 chr2 187062123 187062353 -66194230 + L2 LINE L2 3019 3272 0 27 96 0 0 chr2 187062501 187062584 -66193999 + AT_rich Low_complexity Low_complexity 1 83 0 235 204 10 51 chr2 187063377 187063475 -66193108 + (TA)n Simple_repeat Simple_repeat 1 94 0 1056 224 72 14 chr2 187064671 187064894 -66191689 + MIR SINE MIR 2 237 -25 379 280 173 7 chr2 187065145 187065295 -66191288 + MIR SINE MIR 73 247 -15 30 0 0 0 chr2 187065373 187065403 -66191180 + AT_rich Low_complexity Low_complexity 1 30 0 1786 143 15 4 chr2 187065427 187065692 -66190891 + MER1B DNA MER1_type 57 324 -15 342 0 0 0 chr2 187066313 187066351 -66190232 + (TG)n Simple_repeat Simple_repeat 2 39 0 2409 85 0 3 chr2 187066762 187067068 -66189515 - AluSc SINE Alu -4 305 1 408 202 61 9 chr2 187067093 187067207 -66189376 + MER103 DNA DNA 44 163 -3 5769 159 15 1 chr2 187068280 187069327 -66187256 - Tigger1 DNA MER2_type -1268 1150 89 1236 185 5 0 chr2 187069445 187069650 -66186933 - AluJo SINE Alu -23 289 84 714 157 8 0 chr2 187069650 187069771 -66186812 + AluJb SINE Alu 181 302 -10 431 247 188 82 chr2 187071375 187071416 -66185167 - L2 LINE L2 -97 3216 3181 2116 132 3 10 chr2 187071416 187071727 -66184856 + AluSx SINE Alu 1 309 -3 431 247 188 82 chr2 187071727 187071900 -66184683 - L2 LINE L2 -132 3181 2968 508 196 9 45 chr2 187071900 187072012 -66184571 + MER81 DNA DNA 4 111 -3 431 247 188 82 chr2 187072012 187072051 -66184532 - L2 LINE L2 -345 2968 2935 537 85 57 38 chr2 187072151 187072257 -66184326 + L1M1 LINE L1 3196 3303 -4262 252 171 0 0 chr2 187072275 187072316 -66184267 - THE1C LTR MaLR 0 428 388 1012 41 0 0 chr2 187072316 187072438 -66184145 + AluYb8 SINE Alu 197 318 0 1318 130 199 31 chr2 187072438 187072730 -66183853 - THE1C LTR MaLR -34 341 1 4623 169 29 13 chr2 187072730 187074270 -66182313 + L1M1 LINE L1 3309 6968 -755 509 227 7 7 chr2 187074389 187074543 -66182040 - L1MDa LINE L1 -3108 3432 3279 1556 173 3 67 chr2 187074642 187074972 -66181611 + AluJo SINE Alu 4 312 0 487 124 56 0 chr2 187075154 187075243 -66181340 + L1MA5A LINE L1 6201 6294 -3 24 0 0 0 chr2 187075387 187075411 -66181172 + AT_rich Low_complexity Low_complexity 1 24 0 3267 195 64 41 chr2 187075521 187076101 -66180482 - L1MDa LINE L1 -3253 3287 2722 2286 115 0 0 chr2 187076101 187076405 -66180178 - AluSg SINE Alu -6 304 1 3267 195 64 41 chr2 187076405 187076681 -66179902 - L1MDa LINE L1 -3818 2722 2454 1553 142 25 101 chr2 187076681 187076837 -66179746 - AluJo SINE Alu -18 294 173 2401 101 0 3 chr2 187076837 187077145 -66179438 - AluSg SINE Alu -3 307 1 1553 142 25 101 chr2 187077145 187077305 -66179278 - AluJo SINE Alu -139 173 2 3267 195 64 41 chr2 187077305 187077892 -66178691 - L1MDa LINE L1 -4086 2454 1815 2150 134 0 6 chr2 187077892 187078205 -66178378 - AluSx SINE Alu -1 311 1 23 0 0 0 chr2 187078212 187078235 -66178348 + AT_rich Low_complexity Low_complexity 1 23 0 715 216 14 0 chr2 187078253 187078392 -66178191 - FRAM SINE Alu -26 150 10 189 0 0 0 chr2 187078397 187078418 -66178165 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 249 108 0 0 chr2 187078417 187078454 -66178129 + (TA)n Simple_repeat Simple_repeat 1 37 0 4227 100 10 0 chr2 187078463 187079072 -66177511 - L1PA16 LINE L1 -9 6157 5543 1926 87 15 23 chr2 187079172 187079438 -66177145 + AluSx SINE Alu 38 301 -11 1964 159 0 13 chr2 187079442 187079750 -66176833 + AluJo SINE Alu 3 306 -6 420 275 237 5 chr2 187080029 187080240 -66176343 + MIR SINE MIR 3 262 0 278 252 78 29 chr2 187080402 187080505 -66176078 - MIR SINE MIR -74 188 81 437 302 69 25 chr2 187080529 187080688 -66175895 - MIR3 SINE MIR -41 167 2 1905 209 42 16 chr2 187080760 187081263 -66175320 + L1MB8 LINE L1 5662 6177 -1 484 293 76 44 chr2 187081992 187082217 -66174366 - MIR SINE MIR 0 262 31 3790 195 37 36 chr2 187082226 187083087 -66173496 + MER21B LTR ERV1 1 862 -1 875 218 37 5 chr2 187083310 187083498 -66173085 - MLT1A1 LTR MaLR 0 365 172 714 190 34 83 chr2 187083523 187083728 -66172855 - MLT1A1 LTR MaLR -170 195 1 371 258 106 0 chr2 187083732 187083864 -66172719 + L1MC5 LINE L1 7762 7907 -54 252 224 17 0 chr2 187084615 187084673 -66171910 + L2 LINE L2 3212 3270 -2 686 218 47 12 chr2 187084802 187084972 -66171611 - MLT1A1 LTR MaLR -18 347 172 628 205 34 83 chr2 187084997 187085202 -66171381 - MLT1A1 LTR MaLR -170 195 1 263 311 0 0 chr2 187085235 187085338 -66171245 + L1MC5 LINE L1 7805 7907 -54 338 140 18 0 chr2 187086090 187086147 -66170436 + L2 LINE L2 3254 3311 -2 376 223 8 70 chr2 187087063 187087191 -66169392 + MIR SINE MIR 14 125 -83 192 200 0 0 chr2 187087494 187087539 -66169044 + (TG)n Simple_repeat Simple_repeat 2 46 0 1834 195 92 76 chr2 187088383 187088895 -66167688 + MLT2B1 LTR ERVL 1 520 0 234 0 0 0 chr2 187089028 187089054 -66167529 + (TA)n Simple_repeat Simple_repeat 1 26 0 315 0 0 0 chr2 187089061 187089096 -66167487 + (CA)n Simple_repeat Simple_repeat 2 36 0 21 36 0 0 chr2 187089272 187089300 -66167283 + AT_rich Low_complexity Low_complexity 1 28 0 1125 299 0 7 chr2 187089410 187089714 -66166869 - AluJo SINE Alu 0 302 1 1631 175 0 11 chr2 187090075 187090360 -66166223 - AluJo SINE Alu -30 282 1 605 289 91 41 chr2 187090553 187091190 -66165393 + HAL1b LINE L1 67 735 -613 313 354 71 17 chr2 187091647 187091887 -66164696 + L1M4 LINE L1 2248 2500 -3646 716 234 63 50 chr2 187092452 187093367 -66163216 + L1MC4 LINE L1 5660 6486 -1322 2080 153 0 0 chr2 187093367 187093674 -66162909 - AluSx SINE Alu -1 311 5 716 234 63 50 chr2 187093674 187093747 -66162836 + L1MC4 LINE L1 6486 6557 -1251 247 259 0 0 chr2 187093755 187093809 -66162774 + (TG)n Simple_repeat Simple_repeat 1 54 0 823 205 116 92 chr2 187093856 187094237 -66162346 + MLT2D LTR ERVL 10 399 -65 198 0 0 0 chr2 187094237 187094259 -66162324 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 646 197 35 0 chr2 187094278 187094420 -66162163 + L1MC4 LINE L1 6768 6914 -1128 1010 94 0 0 chr2 187094420 187094547 -66162036 + AluSq/x SINE Alu 1 127 -185 2079 188 37 60 chr2 187094557 187094752 -66161831 + L1MC4 LINE L1 7379 7577 -418 895 142 0 15 chr2 187094752 187094886 -66161697 + FLAM_C SINE Alu 2 133 0 2079 188 37 60 chr2 187094886 187095384 -66161199 + L1MC4 LINE L1 7577 7994 -1 413 330 40 50 chr2 187095767 187096064 -66160519 + L2 LINE L2 2892 3185 -87 1476 216 0 30 chr2 187096130 187096431 -66160152 + AluJo SINE Alu 1 292 -20 28 0 0 0 chr2 187096674 187096702 -66159881 + AT_rich Low_complexity Low_complexity 1 28 0 4397 214 26 8 chr2 187096888 187098048 -66158535 - L1 LINE L1 -841 5305 4125 2406 89 0 0 chr2 187098061 187098363 -66158220 - AluY SINE Alu -9 302 1 344 222 49 12 chr2 187098370 187098451 -66158132 - FLAM SINE Alu -8 125 42 1739 204 85 40 chr2 187098455 187099112 -66157471 - L1MDa LINE L1 -4700 1840 1154 1973 215 72 25 chr2 187099126 187099685 -66156898 - L1MDa LINE L1 -5935 605 21 621 286 12 12 chr2 187100321 187100492 -66156091 - MER5B DNA MER1_type 0 178 8 23 0 0 0 chr2 187101550 187101573 -66155010 + AT_rich Low_complexity Low_complexity 1 23 0 2198 155 38 23 chr2 187101684 187102111 -66154472 + Tigger2a DNA MER2_type 1 433 -1 29 0 0 0 chr2 187103225 187103254 -66153329 + AT_rich Low_complexity Low_complexity 1 29 0 1614 195 0 30 chr2 187103501 187103798 -66152785 - AluJo SINE Alu -24 288 1 203 365 129 0 chr2 187106789 187106959 -66149624 - L2 LINE L2 -183 3089 2898 3150 249 112 24 chr2 187107285 187108551 -66148032 - L2 LINE L2 0 3313 1951 1788 217 19 10 chr2 187108552 187108962 -66147621 - MLT2D LTR ERVL 0 414 1 17511 158 20 11 chr2 187108962 187111394 -66145189 + L1M1 LINE L1 11 2480 -5085 1920 109 19 47 chr2 187111394 187111715 -66144868 + AluSx SINE Alu 1 312 0 17511 158 20 11 chr2 187111715 187112367 -66144216 + L1M1 LINE L1 2480 3124 -4441 783 190 18 0 chr2 187112506 187112669 -66143914 + MLT1B LTR MaLR 193 358 -32 1658 178 9 9 chr2 187112670 187113001 -66143582 - MER7A DNA MER2_type -1 345 17 191 320 13 27 chr2 187113521 187113596 -66142987 + L2 LINE L2 3236 3309 -4 837 289 152 5 chr2 187113606 187113987 -66142596 + L2 LINE L2 2529 2965 -349 1732 140 112 3 chr2 187114001 187114350 -66142233 + MLT1B LTR MaLR 4 390 0 814 243 14 119 chr2 187114359 187114721 -66141862 + L2 LINE L2 2990 3313 0 59 27 0 0 chr2 187114916 187114989 -66141594 + AT_rich Low_complexity Low_complexity 1 73 0 379 301 77 31 chr2 187114990 187115186 -66141397 - MIR SINE MIR -56 206 2 1805 154 23 10 chr2 187115274 187115573 -66141010 + AluJb SINE Alu 1 303 -9 183 80 0 0 chr2 187115605 187115630 -66140953 + (TA)n Simple_repeat Simple_repeat 2 26 0 1739 172 22 27 chr2 187116182 187116549 -66140034 + MLT1A1 LTR MaLR 1 365 0 742 320 120 28 chr2 187116986 187117411 -66139172 + L2 LINE L2 2196 2659 -655 205 184 20 20 chr2 187117930 187117979 -66138604 + L2 LINE L2 3224 3272 0 751 196 0 0 chr2 187118153 187118286 -66138297 + FLAM_C SINE Alu 1 133 0 2195 96 0 23 chr2 187118306 187118608 -66137975 + AluSg SINE Alu 1 295 -15 421 311 62 45 chr2 187118634 187118811 -66137772 + MIR3 SINE MIR 22 201 -7 1675 122 113 127 chr2 187118817 187119251 -66137332 - MSTA LTR MaLR 0 428 1 336 256 181 0 chr2 187119559 187119692 -66136891 - MER103 DNA DNA -8 158 2 2085 105 0 52 chr2 187119850 187120155 -66136428 + AluSc SINE Alu 1 289 -20 324 319 70 19 chr2 187121637 187121794 -66134789 + L1ME4a LINE L1 5743 5907 -214 808 124 0 58 chr2 187121820 187121957 -66134626 + FLAM_C SINE Alu 4 132 -1 420 234 36 0 chr2 187121957 187122068 -66134515 - MLT1J LTR MaLR -12 499 385 687 280 31 16 chr2 187122143 187122400 -66134183 - MLT1J LTR MaLR -243 268 8 1029 147 94 6 chr2 187123156 187123326 -66133257 + AluJo SINE Alu 82 266 -46 2913 178 47 21 chr2 187123382 187124000 -66132583 - MER99 DNA DNA -3 825 192 38922 73 3 6 chr2 187124164 187128631 -66127952 + L1PA5 LINE L1 1 4441 -1713 6462 63 2 25 chr2 187128631 187129500 -66127083 - SVA Other Other -3 1383 535 38922 73 3 6 chr2 187129500 187131205 -66125378 + L1PA5 LINE L1 4441 6150 -4 37 52 0 0 chr2 187131366 187131424 -66125159 + AT_rich Low_complexity Low_complexity 1 58 0 412 209 0 22 chr2 187131684 187131775 -66124808 - MER99 DNA DNA -731 97 9 6340 146 20 6 chr2 187132078 187133538 -66123045 + L1MA2 LINE L1 2733 6304 0 1367 221 24 59 chr2 187133574 187133949 -66122634 + MLT1A1 LTR MaLR 4 365 0 466 242 78 8 chr2 187133952 187134080 -66122503 - L2 LINE L2 -1363 1951 1815 544 282 64 66 chr2 187134264 187134793 -66121790 + L1MEd LINE L1 565 1092 -5027 310 339 124 39 chr2 187135437 187135823 -66120760 - L2 LINE L2 -1 3271 2853 262 197 0 14 chr2 187136414 187136485 -66120098 + AluS SINE Alu 233 302 0 461 292 51 56 chr2 187136501 187136823 -66119760 - L1ME4a LINE L1 -180 5941 5620 2035 141 0 13 chr2 187136823 187137122 -66119461 + AluSx SINE Alu 2 296 -16 461 292 51 56 chr2 187137122 187137213 -66119370 - L1ME4a LINE L1 -501 5620 5530 380 284 137 5 chr2 187137232 187137422 -66119161 - L1ME4a LINE L1 -2338 5470 5256 3061 85 0 20 chr2 187137929 187138374 -66118209 + L1PA13 LINE L1 5709 6144 -19 2150 139 0 3 chr2 187138485 187138788 -66117795 + AluSx SINE Alu 1 302 -10 670 261 207 55 chr2 187139160 187139256 -66117327 - L1MC4a LINE L1 -1846 5962 5882 1952 154 0 41 chr2 187139256 187139575 -66117008 + AluJb SINE Alu 1 306 -6 670 261 207 55 chr2 187139575 187140019 -66116564 - L1MC4a LINE L1 -1926 5882 5340 2265 102 0 3 chr2 187140087 187140382 -66116201 + AluSq SINE Alu 1 294 -19 525 274 130 43 chr2 187140471 187141195 -66115388 - L1MC4a LINE L1 -977 5169 4383 193 169 0 138 chr2 187141360 187141425 -66115158 + L2 LINE L2 3225 3280 -33 4598 181 30 55 chr2 187141519 187141895 -66114688 - MER45B DNA AcHobo -542 1039 655 1854 132 45 24 chr2 187141895 187142184 -66114399 - AluSx SINE Alu -15 297 3 4598 181 30 55 chr2 187142184 187142550 -66114033 - MER45B DNA AcHobo -926 655 330 2029 85 26 59 chr2 187142550 187142856 -66113727 - AluSx SINE Alu -16 296 1 4598 181 30 55 chr2 187142856 187143177 -66113406 - MER45B DNA AcHobo -1251 330 2 1244 201 51 79 chr2 187143433 187143775 -66112808 + MLT1B LTR MaLR 1 347 -49 2123 126 0 13 chr2 187143775 187144077 -66112506 - AluSx SINE Alu -8 304 7 1244 201 51 79 chr2 187144077 187144122 -66112461 + MLT1B LTR MaLR 347 392 -4 1049 271 100 19 chr2 187144864 187145446 -66111137 - L1MC4 LINE L1 -254 7788 7160 1139 206 18 5 chr2 187145759 187145978 -66110605 + MER58A DNA MER1_type 3 224 0 1068 227 35 4 chr2 187146104 187146333 -66110250 + MIR SINE MIR 2 237 -25 24 96 0 0 chr2 187146637 187146710 -66109873 + AT_rich Low_complexity Low_complexity 1 73 0 25 51 0 0 chr2 187146764 187146803 -66109780 + AT_rich Low_complexity Low_complexity 1 39 0 1656 150 86 11 chr2 187147182 187147462 -66109121 - AluJo SINE Alu -11 301 1 298 230 27 0 chr2 187147695 187147769 -66108814 - L1MA5A LINE L1 -21 6276 6201 1145 214 3 70 chr2 187147983 187148282 -66108301 - AluJo SINE Alu -30 282 4 2334 257 85 24 chr2 187148402 187149344 -66107239 + L1MD1 LINE L1 2906 3789 -2357 1937 159 0 32 chr2 187149344 187149659 -66106924 + AluJo SINE Alu 1 305 -7 2334 257 85 24 chr2 187149659 187150281 -66106302 + L1MD1 LINE L1 3789 4720 -1426 3334 184 85 29 chr2 187150290 187150946 -66105637 + L1MD1 LINE L1 4795 5413 -829 1841 176 17 50 chr2 187150946 187151349 -66105234 - MLT1B LTR MaLR 0 390 1 3334 184 85 29 chr2 187151349 187151846 -66104737 + L1MD1 LINE L1 5413 6033 -209 1906 189 6 14 chr2 187152145 187152510 -66104073 + MLT1A1 LTR MaLR 3 364 -1 1116 211 65 34 chr2 187153732 187154088 -66102495 + L1MD3 LINE L1 7629 7995 0 1996 162 0 6 chr2 187154361 187154675 -66101908 + AluJb SINE Alu 1 312 0 21 36 0 0 chr2 187154704 187154732 -66101851 + AT_rich Low_complexity Low_complexity 1 28 0 388 289 48 21 chr2 187155062 187155249 -66101334 - MER117 DNA MER1_type 0 197 6 14336 113 24 60 chr2 187155314 187157076 -66099507 + Tigger1 DNA MER2_type 1 1649 -769 2300 90 0 0 chr2 187157076 187157376 -66099207 + AluY SINE Alu 1 300 -11 14336 113 24 60 chr2 187157376 187158119 -66098464 + Tigger1 DNA MER2_type 1649 2417 -1 213 213 0 0 chr2 187159205 187159252 -66097331 + (CA)n Simple_repeat Simple_repeat 1 47 0 350 309 57 16 chr2 187159638 187159761 -66096822 + MIR SINE MIR 87 214 -48 2399 74 3 0 chr2 187159776 187160073 -66096510 - AluSg1 SINE Alu -11 298 1 237 284 114 0 chr2 187160376 187160464 -66096119 - MIR SINE MIR -157 105 8 252 209 88 77 chr2 187160703 187160794 -66095789 - MIR SINE MIR -48 214 123 1621 191 57 0 chr2 187160795 187161077 -66095506 + AluJb SINE Alu 1 298 -14 370 345 58 35 chr2 187161896 187162067 -66094516 + MIR SINE MIR 18 192 -70 2959 179 58 34 chr2 187162073 187162925 -66093658 + L1MB7 LINE L1 5357 6176 -3 421 157 29 0 chr2 187162943 187163013 -66093570 - AluJ/FRAM SINE Alu -17 295 224 304 297 60 132 chr2 187164702 187165204 -66091379 - L1M2 LINE L1 -5852 997 532 23 68 0 0 chr2 187165292 187165336 -66091247 + GC_rich Low_complexity Low_complexity 1 44 0 292 348 78 31 chr2 187166215 187166561 -66090022 + L2 LINE L2 2661 3057 -215 365 287 41 33 chr2 187166713 187166835 -66089748 + L2 LINE L2 3141 3263 -9 29 28 0 0 chr2 187167298 187167334 -66089249 + AT_rich Low_complexity Low_complexity 1 36 0 365 212 159 38 chr2 187167339 187167471 -66089112 - L3 LINE CR1 -88 1489 1342 327 315 71 46 chr2 187167486 187167683 -66088900 + MIR SINE MIR 5 206 -56 646 283 168 52 chr2 187167697 187168178 -66088405 - L3 LINE CR1 -247 1330 794 208 0 0 59 chr2 187168331 187168365 -66088218 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1958 143 0 0 chr2 187168367 187168646 -66087937 - AluSg SINE Alu -31 279 1 650 222 0 0 chr2 187168649 187168775 -66087808 - FLAM_A SINE Alu -3 130 5 689 264 98 17 chr2 187169364 187169659 -66086924 - L2 LINE L2 -4 3309 2991 270 324 9 9 chr2 187169796 187169901 -66086682 + MER5B DNA MER1_type 74 178 0 1823 141 72 36 chr2 187170011 187170373 -66086210 - THE1C LTR MaLR 0 375 1 2117 139 6 12 chr2 187170941 187171280 -66085303 - MER1B DNA MER1_type 0 337 1 231 36 0 0 chr2 187271801 187271829 -65984754 + (TAA)n Simple_repeat Simple_repeat 2 29 0 259 267 207 15 chr2 187272177 187272312 -65984271 - MLT1F1 LTR MaLR -7 560 400 282 329 46 26 chr2 187272384 187272536 -65984047 - MLT1F1 LTR MaLR -362 205 51 426 69 0 0 chr2 187273550 187273608 -65982975 + (GA)n Simple_repeat Simple_repeat 2 59 0 23 33 0 0 chr2 187276979 187277009 -65979574 + AT_rich Low_complexity Low_complexity 1 30 0 250 384 64 36 chr2 187277665 187277884 -65978699 + L3 LINE CR1 975 1199 -378 197 224 17 0 chr2 187279195 187279253 -65977330 + CT-rich Low_complexity Low_complexity 1 59 0 575 110 17 17 chr2 187279722 187279840 -65976743 + (GA)n Simple_repeat Simple_repeat 2 119 0 182 355 66 16 chr2 187282802 187282923 -65973660 + MIR SINE MIR 100 226 -36 220 315 22 0 chr2 187283352 187283441 -65973142 + MIR SINE MIR 57 147 -115 255 61 0 0 chr2 187283833 187283866 -65972717 + (TTA)n Simple_repeat Simple_repeat 1 33 0 2045 241 25 17 chr2 187284526 187285129 -65971454 - L1MA9 LINE L1 -381 5931 5324 258 302 138 0 chr2 187285277 187285393 -65971190 + MIR SINE MIR 104 235 -27 26 64 0 0 chr2 187286509 187286556 -65970027 + AT_rich Low_complexity Low_complexity 1 47 0 26 0 0 0 chr2 187286739 187286765 -65969818 + AT_rich Low_complexity Low_complexity 1 26 0 259 203 0 17 chr2 187287637 187287696 -65968887 + tRNA-Lys-AAA tRNA tRNA 6 63 -13 22 35 0 0 chr2 187287747 187287776 -65968807 + AT_rich Low_complexity Low_complexity 1 29 0 306 0 0 0 chr2 187287902 187287936 -65968647 + (TA)n Simple_repeat Simple_repeat 2 35 0 377 325 49 39 chr2 187288142 187288428 -65968155 + L1M4 LINE L1 2262 2550 -3596 237 257 14 14 chr2 187288525 187288595 -65967988 + (CATATA)n Simple_repeat Simple_repeat 3 72 0 225 159 0 0 chr2 187289576 187289620 -65966963 + A-rich Low_complexity Low_complexity 1 44 0 563 0 15 0 chr2 187289807 187289874 -65966709 + (GAAAA)n Simple_repeat Simple_repeat 3 70 0 255 186 34 0 chr2 187290493 187290552 -65966031 - LTR37B LTR ERV1 -184 284 224 209 229 16 0 chr2 187292772 187292833 -65963750 + (TTTA)n Simple_repeat Simple_repeat 1 62 0 227 242 11 74 chr2 187294065 187294160 -65962423 + CT-rich Low_complexity Low_complexity 1 89 0 350 170 11 0 chr2 187294320 187294414 -65962169 + (TG)n Simple_repeat Simple_repeat 2 96 0 258 193 26 35 chr2 187295775 187295889 -65960694 + (TTATA)n Simple_repeat Simple_repeat 3 115 0 305 127 32 32 chr2 187297118 187297181 -65959402 - L1MCa LINE L1 -4360 2066 2004 398 252 227 25 chr2 187297792 187298113 -65958470 + MLT1D LTR MaLR 20 405 -100 306 0 0 0 chr2 187298142 187298176 -65958407 + (TTTTTG)n Simple_repeat Simple_repeat 4 37 0 240 204 74 0 chr2 187298176 187298230 -65958353 + MLT1D LTR MaLR 447 504 -1 217 111 79 0 chr2 187299440 187299503 -65957080 + (TA)n Simple_repeat Simple_repeat 2 69 0 410 0 20 0 chr2 187299505 187299555 -65957028 + (TAAA)n Simple_repeat Simple_repeat 1 51 0 312 83 0 0 chr2 187300555 187300603 -65955980 + (TC)n Simple_repeat Simple_repeat 2 49 0 250 94 113 0 chr2 187300614 187300667 -65955916 + MER4B-int LTR ERV1 1150 1208 -5550 21 0 0 0 chr2 187301451 187301472 -65955111 + AT_rich Low_complexity Low_complexity 1 21 0 297 263 38 0 chr2 187303324 187303404 -65953179 + MLT1A2 LTR MaLR 279 361 -13 247 208 104 26 chr2 187303546 187303623 -65952960 + MLT1G LTR MaLR 76 158 -432 1029 89 0 0 chr2 187303843 187303989 -65952594 + (TTTC)n Simple_repeat Simple_repeat 4 149 0 23 33 0 0 chr2 187304023 187304053 -65952530 + AT_rich Low_complexity Low_complexity 1 30 0 270 0 0 0 chr2 187306753 187306783 -65949800 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 186 103 0 0 chr2 187307249 187307278 -65949305 + (A)n Simple_repeat Simple_repeat 1 29 0 243 204 0 0 chr2 187307978 187308032 -65948551 + (CATATA)n Simple_repeat Simple_repeat 3 56 0 555 29 0 0 chr2 187308470 187308539 -65948044 + (TG)n Simple_repeat Simple_repeat 1 69 0 227 261 23 11 chr2 187309918 187310006 -65946577 + CT-rich Low_complexity Low_complexity 1 89 0 462 188 0 0 chr2 187311068 187311169 -65945414 + (TG)n Simple_repeat Simple_repeat 2 102 0 205 186 23 0 chr2 187311776 187311819 -65944764 + (TG)n Simple_repeat Simple_repeat 2 45 0 287 323 169 5 chr2 187313398 187313587 -65942996 + L2 LINE L2 2826 3045 -268 25 0 0 0 chr2 187314016 187314041 -65942542 + AT_rich Low_complexity Low_complexity 1 25 0 410 0 20 0 chr2 187317106 187317156 -65939427 + (TG)n Simple_repeat Simple_repeat 2 52 0 246 32 0 0 chr2 187319776 187319807 -65936776 + (CA)n Simple_repeat Simple_repeat 2 32 0 * 441 0 0 0 chr2 187319806 187319855 -65936728 + (GA)n Simple_repeat Simple_repeat 2 50 0 21 36 0 0 chr2 187319877 187319905 -65936678 + AT_rich Low_complexity Low_complexity 1 28 0 203 286 39 26 chr2 187320125 187320202 -65936381 - L2 LINE L2 -71 3242 3165 355 326 63 61 chr2 187320897 187321372 -65935211 + L1MA4 LINE L1 1743 2218 -4631 353 299 10 10 chr2 187322319 187322516 -65934067 + L1MA4 LINE L1 2976 3172 -3676 2184 292 12 28 chr2 187322524 187324215 -65932368 + L1MA4 LINE L1 4949 6606 -396 432 0 0 0 chr2 187325171 187325219 -65931364 + (CAAAA)n Simple_repeat Simple_repeat 4 51 0 279 315 61 61 chr2 187325355 187325765 -65930818 - L2 LINE L2 -429 2885 2476 685 40 59 0 chr2 187325901 187326002 -65930581 + A-rich Low_complexity Low_complexity 5 111 0 24 0 0 0 chr2 187326928 187326952 -65929631 + AT_rich Low_complexity Low_complexity 1 24 0 501 68 0 0 chr2 187327274 187327348 -65929235 + (CA)n Simple_repeat Simple_repeat 1 74 0 252 234 104 0 chr2 187331310 187331387 -65925196 + AluSg SINE Alu 19 103 -197 26 64 0 0 chr2 187331432 187331479 -65925104 + AT_rich Low_complexity Low_complexity 1 47 0 181 297 55 11 chr2 187336187 187336278 -65920305 - MIR SINE MIR -64 198 104 277 297 130 49 chr2 187340081 187340266 -65916317 + MIR SINE MIR 12 211 -51 22 35 0 0 chr2 187342317 187342346 -65914237 + AT_rich Low_complexity Low_complexity 1 29 0 579 96 0 0 chr2 187343429 187343512 -65913071 + (TG)n Simple_repeat Simple_repeat 2 84 0 446 189 9 0 chr2 187343649 187343760 -65912823 + (TA)n Simple_repeat Simple_repeat 2 113 0 576 0 0 0 chr2 187344495 187344559 -65912024 + (TC)n Simple_repeat Simple_repeat 1 64 0 207 0 0 0 chr2 187344558 187344581 -65912002 + (CA)n Simple_repeat Simple_repeat 1 23 0 * 194 222 19 0 chr2 187344816 187344870 -65911713 + CT-rich Low_complexity Low_complexity 2 56 0 2203 304 26 21 chr2 187347664 187349596 -65906987 + L1MA9 LINE L1 1370 3317 -2829 201 133 0 0 chr2 187350757 187350787 -65905796 + (TG)n Simple_repeat Simple_repeat 1 30 0 375 246 66 0 chr2 187351163 187351285 -65905298 + MER96B DNA MER1_type? 20 149 -268 426 246 52 8 chr2 187351484 187351618 -65904965 + LTR40b LTR ERVL 323 462 0 27 29 0 0 chr2 187352030 187352064 -65904519 + AT_rich Low_complexity Low_complexity 1 34 0 237 59 0 59 chr2 187352364 187352415 -65904168 + (TTTTG)n Simple_repeat Simple_repeat 2 49 0 24 0 0 0 chr2 187352893 187352917 -65903666 + AT_rich Low_complexity Low_complexity 1 24 0 369 0 0 0 chr2 187353095 187353136 -65903447 + (CA)n Simple_repeat Simple_repeat 2 42 0 221 134 45 30 chr2 187353136 187353203 -65903380 + (TA)n Simple_repeat Simple_repeat 2 69 0 250 276 147 6 chr2 187353251 187353421 -65903162 - L1MA8 LINE L1 -42 6249 6056 420 71 0 0 chr2 187357760 187357816 -65898767 + (TC)n Simple_repeat Simple_repeat 1 56 0 235 315 0 0 chr2 187357816 187357908 -65898675 + (CA)n Simple_repeat Simple_repeat 2 93 0 414 57 0 0 chr2 187358950 187359003 -65897580 + (CA)n Simple_repeat Simple_repeat 2 54 0 228 311 0 14 chr2 187359330 187359404 -65897179 + (CATA)n Simple_repeat Simple_repeat 2 74 0 326 227 25 59 chr2 187359535 187359654 -65896929 + L1MC/D LINE L1 5317 5431 -2377 369 0 0 0 chr2 187360177 187360218 -65896365 + (TG)n Simple_repeat Simple_repeat 2 42 0 293 305 39 13 chr2 187360520 187360674 -65895909 + MLT1D LTR MaLR 297 454 -51 3801 270 16 11 chr2 187361850 187363759 -65892824 + L1MA9 LINE L1 4014 5931 -381 387 56 0 0 chr2 187365978 187366032 -65890551 + (CAAAAA)n Simple_repeat Simple_repeat 2 55 0 402 21 0 0 chr2 187366197 187366244 -65890339 + (GA)n Simple_repeat Simple_repeat 2 48 0 591 15 0 0 chr2 187366244 187366312 -65890271 + (GGAA)n Simple_repeat Simple_repeat 2 69 0 432 0 0 0 chr2 187366374 187366422 -65890161 + (A)n Simple_repeat Simple_repeat 1 48 0 21 36 0 0 chr2 187366513 187366541 -65890042 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr2 187367850 187367873 -65888710 + AT_rich Low_complexity Low_complexity 1 23 0 242 29 29 0 chr2 187367960 187367995 -65888588 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 23 0 0 0 chr2 187369455 187369478 -65887105 + AT_rich Low_complexity Low_complexity 1 23 0 259 357 19 32 chr2 187369715 187369869 -65886714 + L2 LINE L2 2828 2979 -334 567 0 0 0 chr2 187370077 187370140 -65886443 + (TAAAA)n Simple_repeat Simple_repeat 3 65 0 441 36 0 0 chr2 187371784 187371839 -65884744 + (GA)n Simple_repeat Simple_repeat 2 56 0 252 0 0 0 chr2 187371951 187371979 -65884604 + (CA)n Simple_repeat Simple_repeat 1 28 0 24 0 0 0 chr2 187372046 187372070 -65884513 + AT_rich Low_complexity Low_complexity 1 24 0 25 75 0 0 chr2 187372998 187373051 -65883532 + AT_rich Low_complexity Low_complexity 1 53 0 225 0 0 0 chr2 187373387 187373412 -65883171 + (A)n Simple_repeat Simple_repeat 1 25 0 336 48 0 0 chr2 187374161 187374203 -65882380 + (CA)n Simple_repeat Simple_repeat 1 42 0 507 165 0 0 chr2 187374411 187374520 -65882063 + (TG)n Simple_repeat Simple_repeat 2 110 0 235 222 19 0 chr2 187374527 187374581 -65882002 + (TCTG)n Simple_repeat Simple_repeat 2 56 0 543 16 0 0 chr2 187374582 187374646 -65881937 + (TG)n Simple_repeat Simple_repeat 1 64 0 184 294 0 0 chr2 187375012 187375063 -65881520 - L2 LINE L2 0 3272 3222 254 245 0 59 chr2 187375781 187375883 -65880700 + (TATATG)n Simple_repeat Simple_repeat 5 100 0 212 151 38 19 chr2 187376960 187377013 -65879570 + (TATATG)n Simple_repeat Simple_repeat 4 57 0 351 0 0 0 chr2 187379301 187379340 -65877243 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 576 0 0 0 chr2 187379833 187379897 -65876686 + (TAGA)n Simple_repeat Simple_repeat 2 65 0 309 228 0 0 chr2 187379899 187379978 -65876605 + (CATATA)n Simple_repeat Simple_repeat 4 82 0 21 0 0 0 chr2 187380452 187380473 -65876110 + AT_rich Low_complexity Low_complexity 1 21 0 627 59 51 0 chr2 187380601 187380719 -65875864 + (TAGA)n Simple_repeat Simple_repeat 2 125 0 252 333 108 0 chr2 187381370 187381472 -65875111 + FLAM_C SINE Alu 4 116 -17 784 287 96 25 chr2 187381625 187382061 -65874522 + MLT1C LTR MaLR 1 467 0 749 11 11 0 chr2 187383491 187383581 -65873002 + (TG)n Simple_repeat Simple_repeat 1 91 0 423 0 0 0 chr2 187383811 187383858 -65872725 + (GA)n Simple_repeat Simple_repeat 2 48 0 312 70 0 0 chr2 187384297 187384340 -65872243 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 330 26 0 0 chr2 187384450 187384489 -65872094 + (CA)n Simple_repeat Simple_repeat 1 39 0 559 293 45 34 chr2 187384498 187384946 -65871637 - L1MA5 LINE L1 -364 5936 5477 558 0 0 0 chr2 187388438 187388500 -65868083 + (TAGA)n Simple_repeat Simple_repeat 1 62 0 673 175 89 89 chr2 187388630 187388921 -65867662 - AluJo SINE Alu 0 312 22 212 163 0 20 chr2 187389502 187389551 -65867032 + GA-rich Low_complexity Low_complexity 1 48 0 284 83 21 0 chr2 187389642 187389690 -65866893 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 253 131 33 0 chr2 187390836 187390897 -65865686 + (TTTA)n Simple_repeat Simple_repeat 2 64 0 213 108 0 0 chr2 187392442 187392479 -65864104 + (TC)n Simple_repeat Simple_repeat 2 38 0 441 0 0 0 chr2 187392484 187392533 -65864050 + (TG)n Simple_repeat Simple_repeat 2 50 0 397 350 86 0 chr2 187393168 187393365 -65863218 + L3b LINE CR1 1128 1341 -242 237 83 0 0 chr2 187394442 187394478 -65862105 + (A)n Simple_repeat Simple_repeat 1 36 0 266 315 68 14 chr2 187394890 187395036 -65861547 + MIR SINE MIR 56 209 -53 348 221 0 25 chr2 187395223 187395345 -65861238 + (CATA)n Simple_repeat Simple_repeat 2 120 0 213 39 0 0 chr2 187395668 187395694 -65860889 + (GGA)n Simple_repeat Simple_repeat 3 28 0 22 0 0 0 chr2 187397017 187397039 -65859544 + AT_rich Low_complexity Low_complexity 1 22 0 252 86 0 0 chr2 187398318 187398353 -65858230 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 579 85 0 0 chr2 187399526 187399608 -65856975 + (TG)n Simple_repeat Simple_repeat 2 83 0 303 167 15 182 chr2 187400298 187400430 -65856153 + AluSq/x SINE Alu 5 105 -198 246 32 0 0 chr2 187400433 187400464 -65856119 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1934 231 25 18 chr2 187402403 187403096 -65853487 - L1MA9 LINE L1 -486 5826 5130 296 384 23 0 chr2 187404698 187404831 -65851752 + MER5A DNA MER1_type 1 136 -53 216 252 10 68 chr2 187405004 187405107 -65851476 + MIR SINE MIR 120 216 -46 782 105 0 8 chr2 187406603 187406727 -65849856 + (GGAA)n Simple_repeat Simple_repeat 2 124 0 450 0 0 0 chr2 187406951 187407001 -65849582 + (CA)n Simple_repeat Simple_repeat 2 51 0 429 247 13 36 chr2 187408665 187408979 -65847604 + GA-rich Low_complexity Low_complexity 1 306 0 259 206 72 41 chr2 187409243 187409340 -65847243 - MIR SINE MIR -50 212 113 935 247 23 13 chr2 187411946 187412254 -65844329 - L1PA16 LINE L1 -236 5930 5620 279 0 0 0 chr2 187412437 187412468 -65844115 + (TG)n Simple_repeat Simple_repeat 1 31 0 274 284 23 0 chr2 187412761 187412849 -65843734 + (CA)n Simple_repeat Simple_repeat 1 90 0 186 286 41 31 chr2 187419071 187419169 -65837414 - MIR SINE MIR -57 205 107 5790 272 29 33 chr2 187420781 187425312 -65831271 - L1MA4 LINE L1 -370 5930 1432 234 222 14 28 chr2 187426178 187426250 -65830333 + AluJ/FLAM SINE Alu 3 73 -229 21 57 0 0 chr2 187426367 187426402 -65830181 + AT_rich Low_complexity Low_complexity 1 35 0 290 250 38 83 chr2 187426761 187426893 -65829690 - MSTC LTR MaLR -4 424 299 231 348 61 0 chr2 187427038 187427153 -65829430 - MSTC LTR MaLR -327 130 9 247 264 149 0 chr2 187427446 187427533 -65829050 - FLAM_C SINE Alu -5 128 29 594 0 0 0 chr2 187429232 187429298 -65827285 + (TC)n Simple_repeat Simple_repeat 1 66 0 279 0 0 0 chr2 187429358 187429389 -65827194 + (TG)n Simple_repeat Simple_repeat 2 32 0 3957 261 12 7 chr2 187430919 187432781 -65823802 - L1MA6 LINE L1 -369 5931 4060 716 266 38 4 chr2 187435680 187435917 -65820666 - L1MA5 LINE L1 -369 5931 5687 25 90 0 0 chr2 187435985 187436052 -65820531 + AT_rich Low_complexity Low_complexity 1 67 0 529 248 39 13 chr2 187436232 187436385 -65820198 - Tigger4(Zombi) DNA MER2_type -8 2723 2567 191 170 40 40 chr2 187436859 187436959 -65819624 + (CATA)n Simple_repeat Simple_repeat 4 103 0 309 51 0 0 chr2 187437069 187437108 -65819475 + (CA)n Simple_repeat Simple_repeat 1 39 0 207 0 0 0 chr2 187437526 187437549 -65819034 + (A)n Simple_repeat Simple_repeat 1 23 0 1463 244 30 23 chr2 187438499 187438971 -65817612 - L1PA16 LINE L1 -236 5930 5456 23 54 0 0 chr2 187439483 187439520 -65817063 + AT_rich Low_complexity Low_complexity 1 37 0 3280 276 21 33 chr2 187440263 187442305 -65814278 - L1ME2 LINE L1 -247 5917 3905 1862 304 26 12 chr2 187442334 187443464 -65813119 - L1ME2 LINE L1 -2639 3507 2363 321 223 33 58 chr2 187443515 187443636 -65812947 - L1ME2 LINE L1 -3785 2361 2244 435 296 15 15 chr2 187443751 187443957 -65812626 - L1ME2 LINE L1 -3784 2362 2157 598 304 57 37 chr2 187444191 187444753 -65811830 - L1M2 LINE L1 -4300 2563 1991 27 0 0 0 chr2 187448425 187448452 -65808131 + AT_rich Low_complexity Low_complexity 1 27 0 224 222 19 0 chr2 187448983 187449037 -65807546 + GA-rich Low_complexity Low_complexity 2 56 0 255 338 0 0 chr2 187449125 187449193 -65807390 - MIR3 SINE MIR -3 205 138 21 0 0 0 chr2 187453558 187453579 -65803004 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr2 187456570 187456590 -65799993 + (TAAAA)n Simple_repeat Simple_repeat 1 20 0 306 0 0 0 chr2 187457278 187457312 -65799271 + (TA)n Simple_repeat Simple_repeat 2 35 0 193 347 25 25 chr2 187460402 187460523 -65796060 + MIR SINE MIR 67 187 -75 260 326 71 10 chr2 187460557 187460655 -65795928 + MIR SINE MIR 19 122 -140 200 211 0 70 chr2 187460993 187461050 -65795533 + GA-rich Low_complexity Low_complexity 4 56 0 343 274 78 114 chr2 187461050 187461295 -65795288 - MIR SINE MIR -17 245 10 402 21 0 0 chr2 187462041 187462088 -65794495 + (CA)n Simple_repeat Simple_repeat 2 48 0 22 56 0 0 chr2 187463215 187463251 -65793332 + AT_rich Low_complexity Low_complexity 1 36 0 225 0 0 0 chr2 187463642 187463667 -65792916 + (GGTTG)n Simple_repeat Simple_repeat 4 28 0 210 150 0 0 chr2 187465863 187465903 -65790680 + (T)n Simple_repeat Simple_repeat 1 40 0 192 40 0 0 chr2 187466680 187466705 -65789878 + (CCCA)n Simple_repeat Simple_repeat 4 28 0 289 250 48 0 chr2 187466874 187466958 -65789625 - LTR40b LTR ERVL 0 462 375 283 312 226 19 chr2 187467207 187467566 -65789017 - L2 LINE L2 -795 2519 2087 200 29 0 59 chr2 187570393 187570427 -65686156 + (TTTTA)n Simple_repeat Simple_repeat 3 34 0 1883 134 7 0 chr2 187570436 187570711 -65685872 - AluSx SINE Alu -27 285 9 25 31 0 0 chr2 187570720 187570752 -65685831 + AT_rich Low_complexity Low_complexity 1 32 0 455 302 29 114 chr2 187572737 187573045 -65683538 + L2 LINE L2 2951 3232 -40 180 0 0 0 chr2 187573209 187573229 -65683354 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2252 92 3 3 chr2 187573238 187573544 -65683039 - AluSp SINE Alu -7 306 1 1881 156 19 32 chr2 187574273 187574652 -65681931 + MLT1A2 LTR MaLR 1 374 0 26 64 0 0 chr2 187575178 187575225 -65681358 + AT_rich Low_complexity Low_complexity 1 47 0 250 57 0 0 chr2 187575930 187575965 -65680618 + (TTTG)n Simple_repeat Simple_repeat 2 96 0 1955 147 0 3 chr2 187575965 187576250 -65680333 - AluSx SINE Alu -28 284 1 2107 109 30 3 chr2 187576376 187576679 -65679904 - AluSp SINE Alu -2 311 1 333 253 84 0 chr2 187576928 187577023 -65679560 - L2 LINE L2 -2 3270 3168 398 250 40 0 chr2 187577675 187577775 -65678808 - MIR SINE MIR -30 232 129 3430 240 64 23 chr2 187577864 187578860 -65677723 - L1MEc LINE L1 -5325 1071 35 23 0 0 0 chr2 187579103 187579126 -65677457 + AT_rich Low_complexity Low_complexity 1 23 0 1729 139 4 22 chr2 187579133 187579407 -65677176 - AluSx SINE Alu -43 269 1 342 311 57 48 chr2 187579585 187579794 -65676789 - MLT1K LTR MaLR -233 355 145 385 272 70 0 chr2 187579952 187580066 -65676517 + L2 LINE L2 1891 2012 -1302 524 273 199 11 chr2 187581432 187581703 -65674880 + L2 LINE L2 1785 2106 -1208 5465 142 17 22 chr2 187581742 187583221 -65673362 - L1PA16 LINE L1 -4 6162 4673 1673 147 20 42 chr2 187583221 187583527 -65673056 - AluJb SINE Alu -13 299 1 5465 142 17 22 chr2 187583527 187583550 -65673033 - L1PA16 LINE L1 -1493 4673 4651 1240 182 18 14 chr2 187583557 187583832 -65672751 + L1PA16 LINE L1 4364 4639 -1507 980 319 167 26 chr2 187583898 187584857 -65671726 + L2 LINE L2 2219 3309 -4 550 254 37 8 chr2 187585233 187585367 -65671216 + L1MEc LINE L1 127 264 -6132 283 203 110 8 chr2 187585363 187585481 -65671102 + L1M4 LINE L1 2865 2994 -3152 * 1340 134 186 8 chr2 187585493 187585746 -65670837 - AluY SINE Alu -13 298 1 22 0 0 0 chr2 187585880 187585902 -65670681 + AT_rich Low_complexity Low_complexity 1 22 0 26 50 0 0 chr2 187587236 187587276 -65669307 + AT_rich Low_complexity Low_complexity 1 40 0 1972 136 0 40 chr2 187587751 187588074 -65668509 + AluSx SINE Alu 1 310 -2 314 236 158 16 chr2 187588932 187589059 -65667524 - L1ME1 LINE L1 0 6166 6022 841 130 0 38 chr2 187589068 187589199 -65667384 - FLAM_C SINE Alu -5 128 3 22 0 0 0 chr2 187589921 187589943 -65666640 + AT_rich Low_complexity Low_complexity 1 22 0 1112 146 0 12 chr2 187590101 187590265 -65666318 + FRAM SINE Alu 1 159 -17 214 91 0 45 chr2 187590412 187590456 -65666127 + (TTTTTG)n Simple_repeat Simple_repeat 1 42 0 301 203 31 31 chr2 187590909 187590973 -65665610 - MER2 DNA MER2_type -2 343 280 351 349 84 5 chr2 187591274 187591489 -65665094 + L1ME1 LINE L1 3540 3771 -2375 25 0 0 0 chr2 187591763 187591788 -65664795 + AT_rich Low_complexity Low_complexity 1 25 0 3259 211 65 33 chr2 187591847 187593483 -65663100 + L1ME1 LINE L1 4493 6161 -5 2271 110 3 0 chr2 187594173 187594472 -65662111 + AluSq SINE Alu 1 300 -13 395 285 43 40 chr2 187594494 187594747 -65661836 - L1MC4a LINE L1 -1742 6066 5813 533 212 29 77 chr2 187594761 187594931 -65661652 + MLT1E2 LTR MaLR 23 184 -442 24 0 0 29 chr2 187595073 187595096 -65661487 + AT_rich Low_complexity Low_complexity 1 24 -10 2541 58 0 13 chr2 187595096 187595408 -65661175 + AluY SINE Alu 1 308 -3 24 0 0 29 chr2 187595408 187595419 -65661164 + AT_rich Low_complexity Low_complexity 24 34 0 2050 260 23 50 chr2 187595440 187596364 -65660219 + L1M4 LINE L1 3020 3918 -2228 963 244 72 40 chr2 187596449 187596798 -65659785 - L1MC4 LINE L1 -122 7920 7561 917 339 7 42 chr2 187596821 187597249 -65659334 + L1M3a LINE L1 1542 1954 -5532 613 319 54 8 chr2 187598065 187598306 -65658277 + L1M3a LINE L1 1897 2148 -5417 4546 232 26 8 chr2 187598797 187599565 -65657018 + L1PA15 LINE L1 2454 3252 -2894 1993 139 3 13 chr2 187599565 187599874 -65656709 + AluSx SINE Alu 1 306 -6 4546 232 26 8 chr2 187599874 187600306 -65656277 + L1PA15 LINE L1 3252 3675 -2471 43452 43 2 1 chr2 187600354 187606523 -65650060 + L1PA3 LINE L1 1 6171 0 8143 168 23 11 chr2 187606523 187608714 -65647869 + L1PA15 LINE L1 3688 5904 -261 204 240 106 96 chr2 187609357 187609461 -65647122 - MIR SINE MIR -46 216 112 210 226 280 21 chr2 187610293 187610386 -65646197 + MIR SINE MIR 19 135 -73 205 195 0 0 chr2 187610823 187610864 -65645719 + L2 LINE L2 3226 3266 -6 21 0 0 0 chr2 187611569 187611590 -65644993 + AT_rich Low_complexity Low_complexity 1 21 0 618 166 21 96 chr2 187613274 187613301 -65643282 - MER53 DNA DNA -13 176 149 2071 109 3 7 chr2 187613301 187613619 -65642964 - AluSx SINE Alu 0 319 3 618 166 21 96 chr2 187613619 187613777 -65642806 - MER53 DNA DNA -40 149 4 319 296 148 31 chr2 187617008 187617204 -65639379 + L2 LINE L2 3094 3312 -1 2337 98 0 16 chr2 187618347 187618665 -65637918 - AluSp SINE Alu 0 313 1 1212 159 48 0 chr2 187618728 187618936 -65637647 + AluJb SINE Alu 85 302 -10 347 278 208 17 chr2 187619853 187620026 -65636557 + MIR SINE MIR 44 249 -13 189 349 58 0 chr2 187620289 187620375 -65636208 + L2 LINE L2 3221 3311 -2 2507 64 0 0 chr2 187620391 187620702 -65635881 - AluY SINE Alu 0 311 1 1433 184 35 53 chr2 187620875 187621158 -65635425 + AluJo SINE Alu 1 278 -34 944 179 26 0 chr2 187621702 187621892 -65634691 + L1PA15 LINE L1 5971 6165 0 217 333 43 11 chr2 187621930 187622023 -65634560 - MIR SINE MIR -147 115 20 2087 126 3 35 chr2 187622522 187622839 -65633744 + AluSx SINE Alu 1 307 -5 1842 136 0 0 chr2 187623830 187624087 -65632496 - AluSq SINE Alu -56 257 1 356 253 121 37 chr2 187624141 187624331 -65632252 - HAL1 LINE L1 -17 2490 2285 229 272 0 22 chr2 187624459 187624551 -65632032 + L1MC4 LINE L1 6614 6703 -1339 * 260 198 0 62 chr2 187624485 187624581 -65632002 - L1MC4 LINE L1 -1339 6703 6614 242 259 24 0 chr2 187624584 187624669 -65631914 + L1MC4 LINE L1 6617 6703 -1339 242 267 0 22 chr2 187624655 187624745 -65631838 - L1MC4 LINE L1 -1341 6701 6614 231 308 0 22 chr2 187624669 187624760 -65631823 + L1MC4 LINE L1 6614 6702 -1340 * 721 208 9 9 chr2 187624764 187624990 -65631593 + (CATA)n Simple_repeat Simple_repeat 1 226 0 710 219 0 11 chr2 187625020 187625198 -65631385 + (CATATA)n Simple_repeat Simple_repeat 1 176 0 584 221 32 0 chr2 187625198 187625641 -65630942 + (CATA)n Simple_repeat Simple_repeat 1 457 0 574 236 153 56 chr2 187625889 187626262 -65630321 - HAL1 LINE L1 -763 1744 1336 1474 209 57 8 chr2 187626285 187626672 -65629911 - L1MB8 LINE L1 -6 6172 5767 3061 218 67 18 chr2 187628445 187629752 -65626831 - L1MB8 LINE L1 -393 5781 4410 758 245 83 52 chr2 187629757 187630177 -65626406 - HAL1 LINE L1 -1154 1353 921 573 223 0 0 chr2 187630282 187630448 -65626135 + (TA)n Simple_repeat Simple_repeat 1 166 0 2304 73 0 0 chr2 187630905 187631205 -65625378 + L1PA7 LINE L1 5854 6153 -1 372 314 106 42 chr2 187632214 187632638 -65623945 + MLT1K LTR MaLR 134 584 -4 925 239 42 17 chr2 187632785 187633023 -65623560 - MLT1K LTR MaLR -80 508 265 1806 143 4 0 chr2 187633985 187634265 -65622318 - L1MC1 LINE L1 -5 6328 6048 225 250 15 15 chr2 187634301 187634369 -65622214 - L1MC1 LINE L1 -277 6056 5989 575 273 113 44 chr2 187635449 187635636 -65620947 + L1ME3A LINE L1 5546 5765 -405 1701 182 42 62 chr2 187635636 187636038 -65620545 - MSTD LTR MaLR -1 395 2 575 273 113 44 chr2 187636038 187636169 -65620414 + L1ME3A LINE L1 5765 5886 -284 316 163 26 26 chr2 187636205 187636358 -65620225 + (TA)n Simple_repeat Simple_repeat 1 153 0 487 311 86 42 chr2 187636904 187637498 -65619085 + L1MEd LINE L1 246 865 -5254 282 115 0 19 chr2 187637542 187637594 -65618989 - Alu SINE Alu -2 300 250 34 24 0 0 chr2 187637675 187637716 -65618867 + AT_rich Low_complexity Low_complexity 1 41 0 2018 137 0 3 chr2 187639206 187639499 -65617084 - AluSx SINE Alu -20 292 1 1437 222 154 2 chr2 187639969 187640411 -65616172 - MER45B DNA AcHobo 0 1040 532 2381 81 0 10 chr2 187640424 187640733 -65615850 + AluY SINE Alu 1 306 -5 372 59 88 0 chr2 187641108 187641210 -65615373 + (TA)n Simple_repeat Simple_repeat 2 112 0 187 54 54 0 chr2 187641245 187641282 -65615301 + (TA)n Simple_repeat Simple_repeat 1 39 0 1411 159 101 7 chr2 187641291 187641567 -65615016 - L1PA16 LINE L1 -54 6112 5811 445 303 108 53 chr2 187642012 187642636 -65613947 + L1ME4a LINE L1 5267 5936 -185 1923 118 21 7 chr2 187642636 187642924 -65613659 - AluSq SINE Alu -21 292 1 445 303 108 53 chr2 187642924 187643095 -65613488 + L1ME4a LINE L1 5936 6096 -25 408 278 30 8 chr2 187644428 187644561 -65612022 - MER5A DNA MER1_type -4 185 50 216 130 0 0 chr2 187644868 187644914 -65611669 + (A)n Simple_repeat Simple_repeat 1 46 0 2196 117 3 0 chr2 187644917 187645215 -65611368 + AluSc SINE Alu 1 299 -10 250 290 59 67 chr2 187645838 187646033 -65610550 + MIR SINE MIR 20 218 -44 2316 95 3 0 chr2 187647168 187647464 -65609119 - AluSg SINE Alu -13 297 1 295 306 45 38 chr2 187648024 187648181 -65608402 + MER5B DNA MER1_type 2 159 -19 1413 155 30 54 chr2 187648702 187649037 -65607546 - L1MA7 LINE L1 -2 6289 5963 245 271 106 0 chr2 187652709 187652794 -65603789 + MIR3 SINE MIR 85 178 -30 1572 193 22 4 chr2 187652810 187653080 -65603503 + AluJb SINE Alu 17 291 -21 1077 234 39 0 chr2 187653174 187653405 -65603178 + MIR SINE MIR 12 251 -11 247 277 45 27 chr2 187654005 187654117 -65602466 - MIR SINE MIR -42 220 107 21 0 0 0 chr2 187654715 187654736 -65601847 + AT_rich Low_complexity Low_complexity 1 21 0 226 269 19 74 chr2 187655213 187655321 -65601262 + LTR67 LTR ERVL 456 557 0 426 244 143 70 chr2 187655418 187655648 -65600935 + MIR SINE MIR 1 247 -15 25 0 0 0 chr2 187655926 187655951 -65600632 + AT_rich Low_complexity Low_complexity 1 25 0 275 263 105 0 chr2 187656423 187656499 -65600084 + MIR SINE MIR 23 106 -156 216 196 0 0 chr2 187657009 187657055 -65599528 + A-rich Low_complexity Low_complexity 1 46 0 590 329 19 9 chr2 187657058 187657274 -65599309 - MIR SINE MIR -41 221 4 186 103 0 0 chr2 187657530 187657559 -65599024 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4065 143 22 37 chr2 187657716 187658491 -65598092 + L1MB3 LINE L1 5413 6175 -8 21 0 0 0 chr2 187658491 187658512 -65598071 + AT_rich Low_complexity Low_complexity 1 21 0 6234 82 5 3 chr2 187658522 187659857 -65596726 - L1PA13 LINE L1 -14 6149 4808 3257 156 16 38 chr2 187659864 187660472 -65596111 - L1MA8 LINE L1 -209 6082 5488 1064 171 0 26 chr2 187660472 187660665 -65595918 - AluJo SINE Alu -4 308 121 3648 139 6 18 chr2 187660665 187661403 -65595180 - L1MA8 LINE L1 -743 5403 4749 354 223 217 30 chr2 187661403 187661569 -65595014 - MLT1H LTR MaLR -4 538 342 391 338 118 29 chr2 187661603 187661807 -65594776 - MLT1H LTR MaLR -249 300 79 9654 186 19 21 chr2 187661893 187662808 -65593775 - L1PA16 LINE L1 -5 6161 5246 2183 115 0 7 chr2 187662808 187663112 -65593471 - AluSx SINE Alu -10 302 1 9654 186 19 21 chr2 187663112 187665334 -65591249 - L1PA16 LINE L1 -920 5246 3035 823 171 6 24 chr2 187665333 187665497 -65591086 + L1PA16 LINE L1 5940 6100 -66 * 292 257 26 18 chr2 187665528 187665641 -65590942 + L1ME LINE L1 5336 5449 -715 243 186 23 0 chr2 187665642 187665685 -65590898 - MER45B DNA AcHobo -747 293 250 661 231 59 38 chr2 187665696 187665882 -65590701 + MER45B DNA AcHobo 327 516 -524 306 0 0 0 chr2 187665890 187665924 -65590659 + (TA)n Simple_repeat Simple_repeat 2 35 0 230 362 3 14 chr2 187666374 187666455 -65590128 - MIR SINE MIR -124 84 2 214 306 0 0 chr2 187666466 187666528 -65590055 - L2 LINE L2 -1 3271 3210 26 0 0 0 chr2 187668035 187668061 -65588522 + AT_rich Low_complexity Low_complexity 1 26 0 254 233 17 52 chr2 187669436 187669552 -65587031 + CT-rich Low_complexity Low_complexity 4 115 0 323 283 11 0 chr2 187669847 187669939 -65586644 + (TA)n Simple_repeat Simple_repeat 2 94 0 265 274 24 0 chr2 187670006 187670114 -65586469 + (CATATA)n Simple_repeat Simple_repeat 1 110 0 1899 96 0 0 chr2 187671109 187671349 -65585234 + AluY SINE Alu 58 297 -14 25 0 0 0 chr2 187672723 187672748 -65583835 + AT_rich Low_complexity Low_complexity 1 25 0 236 302 83 10 chr2 187673094 187673190 -65583393 - L3b LINE CR1 -130 1453 1351 453 269 112 39 chr2 187673437 187673749 -65582834 - MER97c DNA MER1_type? 0 1090 756 2445 242 88 11 chr2 187673752 187674550 -65582033 - MER97b DNA MER1_type? -194 859 1 1040 220 11 60 chr2 187675024 187675292 -65581291 - L1ME1 LINE L1 -8 6158 5904 1256 78 6 6 chr2 187675292 187675472 -65581111 + MSTA LTR MaLR 1 180 -248 1448 28 0 17 chr2 187675473 187675652 -65580931 - L1PA4 LINE L1 0 6155 5980 6736 17 0 0 chr2 187675652 187676422 -65580161 + L1PA2 LINE L1 5384 6155 0 1792 14 0 0 chr2 187676435 187676642 -65579941 + L1PA5 LINE L1 5770 5976 -178 1600 167 0 4 chr2 187677125 187677383 -65579200 + AluJb SINE Alu 3 259 -53 324 315 34 13 chr2 187677386 187677535 -65579048 - L2 LINE L2 -706 2608 2457 2054 135 140 8 chr2 187677570 187677948 -65578635 - MSTA LTR MaLR 0 428 1 1970 126 3 13 chr2 187677948 187678257 -65578326 - MSTA-int LTR MaLR 0 1580 1275 299 231 13 0 chr2 187678313 187678391 -65578192 + L1MC4 LINE L1 5716 5794 -327 15450 151 34 23 chr2 187678412 187683212 -65573371 - L1MA1 LINE L1 0 7721 2835 1915 162 0 0 chr2 187683212 187683531 -65573052 - AluSx SINE Alu 0 319 1 15450 151 34 23 chr2 187683531 187685359 -65571224 - L1MA1 LINE L1 -4886 2835 1027 344 322 26 0 chr2 187685390 187685542 -65571041 + L1MC4 LINE L1 5815 5970 -1838 22 35 0 0 chr2 187685671 187685700 -65570883 + AT_rich Low_complexity Low_complexity 1 29 0 556 226 65 70 chr2 187685865 187686064 -65570519 + L2 LINE L2 2596 2793 -521 653 254 124 72 chr2 187686066 187686413 -65570170 + L2 LINE L2 2941 3305 -8 329 311 0 0 chr2 187686475 187686565 -65570018 + L1MC4 LINE L1 6614 6703 -1339 250 261 22 43 chr2 187686597 187686689 -65569894 - L1MC4 LINE L1 -1339 6703 6614 297 316 0 0 chr2 187686695 187686831 -65569752 + (TA)n Simple_repeat Simple_repeat 2 137 0 263 167 30 45 chr2 187686850 187686916 -65569667 + (CATATA)n Simple_repeat Simple_repeat 5 69 0 23 54 0 0 chr2 187687547 187687584 -65568999 + AT_rich Low_complexity Low_complexity 1 37 0 21 71 0 0 chr2 187688150 187688192 -65568391 + AT_rich Low_complexity Low_complexity 1 42 0 1520 203 7 10 chr2 187688216 187688512 -65568071 + AluJo SINE Alu 1 295 -17 21 36 0 0 chr2 187688613 187688641 -65567942 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 187689212 187689240 -65567343 + AT_rich Low_complexity Low_complexity 1 28 0 264 30 0 0 chr2 187689876 187689909 -65566674 + (TG)n Simple_repeat Simple_repeat 2 34 0 206 156 0 0 chr2 187690195 187690227 -65566356 - MER91B DNA MER1_type -126 64 33 315 309 99 99 chr2 187691005 187691348 -65565235 + L2 LINE L2 2926 3268 -4 1838 95 15 15 chr2 187691822 187692118 -65564465 + AluSc SINE Alu 8 303 0 1567 209 23 3 chr2 187693311 187693617 -65562966 - AluJb SINE Alu 0 312 1 685 251 70 0 chr2 187693892 187694079 -65562504 + MIR SINE MIR 63 262 0 243 190 0 0 chr2 187697182 187697240 -65559343 + (TA)n Simple_repeat Simple_repeat 2 59 0 2044 140 3 0 chr2 187700376 187700683 -65555900 - AluSx SINE Alu -4 308 1 21 0 0 0 chr2 187701518 187701539 -65555044 + AT_rich Low_complexity Low_complexity 1 21 0 223 266 156 9 chr2 187701865 187701974 -65554609 - L2 LINE L2 0 3313 3189 2073 113 0 0 chr2 187704199 187704474 -65552109 - AluSx SINE Alu -5 307 33 1037 161 16 10 chr2 187704691 187704884 -65551699 + AluSg SINE Alu 1 194 -116 289 172 94 0 chr2 187705006 187705070 -65551513 + MER3 DNA MER1_type 136 205 -4 327 235 65 98 chr2 187705090 187705243 -65551340 + MIR SINE MIR 59 206 -56 207 358 173 6 chr2 187705495 187705657 -65550926 - MIR SINE MIR -2 260 72 327 106 0 0 chr2 187705658 187705705 -65550878 - MADE1 DNA Mariner 0 80 34 425 108 46 0 chr2 187705735 187705800 -65550783 - MADE1 DNA Mariner -9 71 4 634 240 93 77 chr2 187706103 187706226 -65550357 + MIR SINE MIR 6 126 -136 2733 68 3 14 chr2 187706226 187706594 -65549989 + L1PA7 LINE L1 5778 6141 -13 634 240 93 77 chr2 187706594 187706716 -65549867 + MIR SINE MIR 126 255 -7 385 277 31 0 chr2 187707964 187708094 -65548489 + L1ME LINE L1 5547 5680 -441 1556 195 98 36 chr2 187708286 187708764 -65547819 - Charlie4a DNA MER1_type 0 508 1 9850 130 14 18 chr2 187709081 187709240 -65547343 - MER41B-int LTR ERV1 -4424 1522 1364 216 0 0 0 chr2 187709240 187709264 -65547319 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 9850 130 14 18 chr2 187709264 187710632 -65545951 - MER41B-int LTR ERV1 -4582 1364 1 907 89 25 57 chr2 187710632 187710718 -65545865 - MER41B LTR ERV1 0 635 555 1544 108 31 0 chr2 187710718 187710941 -65545642 - MER30 DNA MER1_type 0 230 1 907 89 25 57 chr2 187710941 187711012 -65545571 - MER41B LTR ERV1 -80 555 483 261 139 0 0 chr2 187713133 187713176 -65543407 + (TTCCC)n Simple_repeat Simple_repeat 4 46 0 2089 141 16 0 chr2 187713186 187713490 -65543093 - AluSx SINE Alu -1 311 3 21 0 0 0 chr2 187714287 187714308 -65542275 + AT_rich Low_complexity Low_complexity 1 21 0 423 395 92 19 chr2 187714398 187714988 -65541595 - L2 LINE L2 -676 2638 2006 7011 60 7 0 chr2 187715288 187716777 -65539806 + L1PA7 LINE L1 4659 6154 0 195 379 39 19 chr2 187718431 187718534 -65538049 - MIR SINE MIR -66 142 38 1237 266 223 23 chr2 187718580 187719129 -65537454 + L2 LINE L2 2403 3084 -229 1942 188 71 133 chr2 187719129 187719904 -65536679 - LTR8A LTR ERV1 0 727 1 1237 266 223 23 chr2 187719904 187719996 -65536587 + L2 LINE L2 3084 3156 -157 2283 92 0 0 chr2 187719997 187720309 -65536274 - AluSx SINE Alu 0 312 1 44 110 0 0 chr2 187720311 187720502 -65536081 + AT_rich Low_complexity Low_complexity 1 191 0 330 26 0 0 chr2 187720503 187720542 -65536041 + (CA)n Simple_repeat Simple_repeat 1 39 0 450 299 52 0 chr2 187720542 187720676 -65535907 + L2 LINE L2 3172 3312 -1 241 224 0 0 chr2 187720676 187720734 -65535849 - L1ME LINE L1 -456 5665 5608 2657 134 40 7 chr2 187721104 187721558 -65535025 - MER34C LTR ERV1 0 585 117 2124 98 101 21 chr2 187721659 187721996 -65534587 - THE1B LTR MaLR 0 364 1 299 337 40 0 chr2 187722142 187722243 -65534340 + MIR SINE MIR 19 123 -139 2980 245 38 11 chr2 187722272 187723173 -65533410 + L1ME3 LINE L1 5173 6096 -66 22 0 0 0 chr2 187723175 187723197 -65533386 + AT_rich Low_complexity Low_complexity 1 22 0 357 279 48 0 chr2 187723239 187723343 -65533240 + MIR SINE MIR 137 245 -17 21 0 0 0 chr2 187723622 187723643 -65532940 + AT_rich Low_complexity Low_complexity 1 21 0 543 308 59 8 chr2 187723693 187723946 -65532637 + L1ME LINE L1 5402 5667 -454 673 211 0 35 chr2 187724038 187724178 -65532405 - Tigger3b DNA MER2_type 0 1232 1098 2522 99 0 51 chr2 187724178 187724229 -65532354 - THE1C LTR MaLR -1 374 322 1948 119 51 14 chr2 187724229 187724524 -65532059 - AluSx SINE Alu -6 306 1 2522 99 0 51 chr2 187724524 187724864 -65531719 - THE1C LTR MaLR -53 322 3 * 6420 128 37 29 chr2 187724864 187725952 -65530631 - Tigger3b DNA MER2_type -134 1097 1 252 273 109 36 chr2 187726916 187727081 -65529502 + L1ME LINE L1 5727 5903 -218 549 160 161 0 chr2 187727200 187727343 -65529240 + MER58B DNA MER1_type 169 336 -5 24 0 0 0 chr2 187727370 187727394 -65529189 + AT_rich Low_complexity Low_complexity 1 24 0 24 32 0 0 chr2 187727602 187727633 -65528950 + AT_rich Low_complexity Low_complexity 1 31 0 457 296 53 12 chr2 187727761 187728008 -65528575 - MARNA DNA Mariner -281 305 49 3961 32 0 0 chr2 187728869 187729337 -65527246 - L1PA4 LINE L1 0 6155 5688 9597 26 3 0 chr2 187728871 187730780 -65525803 - L1PA4 LINE L1 0 6155 4241 385 247 72 60 chr2 187731401 187731553 -65525030 + MIR SINE MIR 61 212 -50 604 228 168 55 chr2 187733869 187734273 -65522310 + L1ME4a LINE L1 5664 6113 -8 22 0 0 0 chr2 187735642 187735664 -65520919 + AT_rich Low_complexity Low_complexity 1 22 0 1532 294 63 9 chr2 187738616 187739143 -65517440 - MLT1H1 LTR MaLR 0 555 1 453 204 31 0 chr2 187740047 187740145 -65516438 - MER53 DNA DNA 0 189 89 679 132 26 0 chr2 187740172 187740286 -65516297 - MER53 DNA DNA -71 118 2 244 300 41 96 chr2 187741575 187741795 -65514788 + MIR SINE MIR 5 212 -50 22 56 0 0 chr2 187741845 187741881 -65514702 + AT_rich Low_complexity Low_complexity 1 36 0 248 88 35 17 chr2 187741918 187741976 -65514607 - L1PA15 LINE L1 -6 6159 6101 22 35 0 0 chr2 187741980 187742009 -65514574 + AT_rich Low_complexity Low_complexity 1 29 0 267 241 52 0 chr2 187795199 187795257 -65461326 - L2 LINE L2 0 3313 3253 218 330 87 10 chr2 187795471 187795574 -65461009 + L2 LINE L2 2895 3005 -267 497 311 140 6 chr2 187795916 187796080 -65460503 - MER5A DNA MER1_type 0 189 4 190 365 151 13 chr2 187796521 187796680 -65459903 + MIR3 SINE MIR 16 196 -12 234 310 239 7 chr2 187796895 187797037 -65459546 + MER5B DNA MER1_type 1 175 -3 334 246 0 61 chr2 187797097 187797212 -65459371 + MIR SINE MIR 54 163 -45 228 140 0 20 chr2 187798544 187798594 -65457989 + MADE1 DNA Mariner 2 50 -30 180 263 158 13 chr2 187798659 187798735 -65457848 - MIR3 SINE MIR -11 197 111 22 56 0 0 chr2 187798994 187799030 -65457553 + AT_rich Low_complexity Low_complexity 1 36 0 595 303 51 5 chr2 187799143 187799338 -65457245 + MIR SINE MIR 29 232 -30 23 0 0 0 chr2 187799375 187799398 -65457185 + AT_rich Low_complexity Low_complexity 1 23 0 387 298 155 19 chr2 187800176 187800337 -65456246 - MER5A DNA MER1_type -1 188 6 1548 214 3 7 chr2 187801582 187801886 -65454697 - AluJo SINE Alu -9 303 1 1029 298 40 9 chr2 187802472 187802794 -65453789 + L3 LINE CR1 1221 1552 -25 199 343 14 0 chr2 187803181 187803251 -65453332 - L2 LINE L2 -14 3258 3188 2234 107 7 3 chr2 187805519 187805819 -65450764 + AluSc SINE Alu 1 301 -8 239 206 44 15 chr2 187805854 187805922 -65450661 + (CA)n Simple_repeat Simple_repeat 2 71 0 197 170 55 24 chr2 187805964 187806129 -65450454 + (CA)n Simple_repeat Simple_repeat 1 170 0 451 363 30 0 chr2 187806230 187806365 -65450218 - L2 LINE L2 0 3272 3134 22 0 0 0 chr2 187809416 187809438 -65447145 + AT_rich Low_complexity Low_complexity 1 22 0 306 327 81 73 chr2 187809807 187810165 -65446418 - L2 LINE L2 0 3272 2912 228 224 0 0 chr2 187810851 187810900 -65445683 + (CA)n Simple_repeat Simple_repeat 2 50 0 22 0 0 0 chr2 187811677 187811699 -65444884 + AT_rich Low_complexity Low_complexity 1 22 0 59 24 0 12 chr2 187811897 187811926 -65444657 + AT_rich Low_complexity Low_complexity 1 29 -54 2135 130 0 0 chr2 187811926 187812219 -65444364 + AluSx SINE Alu 1 293 -19 59 24 0 12 chr2 187812219 187812273 -65444310 + AT_rich Low_complexity Low_complexity 29 83 0 378 232 10 0 chr2 187812370 187812469 -65444114 + L1ME4a LINE L1 5808 5907 -214 1786 155 2 114 chr2 187813358 187813797 -65442786 + MLT1B LTR MaLR 1 390 0 324 0 0 0 chr2 187814109 187814145 -65442438 + (TG)n Simple_repeat Simple_repeat 1 36 0 322 221 64 36 chr2 187814876 187815016 -65441567 + L1MD1 LINE L1 1963 2106 -4434 625 221 134 69 chr2 187815021 187815283 -65441300 - MLT2B1 LTR ERVL -5 515 237 364 195 12 0 chr2 187815304 187815386 -65441197 - MLT2B2 LTR ERVL -432 83 1 243 203 62 0 chr2 187815389 187815453 -65441130 + L1MD1 LINE L1 2108 2175 -4365 5176 227 59 37 chr2 187815483 187816972 -65439611 + L1MD1 LINE L1 2289 3744 -2796 1906 156 3 0 chr2 187816972 187817260 -65439323 + AluSx SINE Alu 1 289 -23 5176 227 59 37 chr2 187817260 187817686 -65438897 + L1MD1 LINE L1 3744 4159 -2381 2200 123 0 7 chr2 187817686 187817994 -65438589 + AluSx SINE Alu 3 308 -4 5176 227 59 37 chr2 187817994 187818296 -65438287 + L1MD1 LINE L1 4159 4453 -2087 1604 132 20 92 chr2 187818296 187818591 -65437992 + AluJb SINE Alu 21 294 -18 5176 227 59 37 chr2 187818591 187819304 -65437279 + L1MD1 LINE L1 4453 5413 -1127 523 260 63 32 chr2 187819319 187819604 -65436979 - MLT1D LTR MaLR -191 314 21 1430 167 25 7 chr2 187819613 187819888 -65436695 + L1MD1 LINE L1 6167 6446 -190 333 68 0 0 chr2 187819915 187819959 -65436624 + (CA)n Simple_repeat Simple_repeat 1 44 0 328 276 0 0 chr2 187819960 187820058 -65436525 + L1MD2 LINE L1 6153 6250 -109 547 45 0 0 chr2 187820058 187820125 -65436458 + AluY SINE Alu 229 295 -14 336 218 69 0 chr2 187820128 187820229 -65436354 + L1MD1 LINE L1 6528 6635 -1 343 315 119 21 chr2 187820459 187820602 -65435981 - L2 LINE L2 -184 3088 2932 262 410 64 6 chr2 187821034 187821190 -65435393 - L2 LINE L2 -246 3026 2862 482 261 154 64 chr2 187821257 187821583 -65435000 - MLT1H LTR MaLR -50 499 131 1712 176 5 88 chr2 187821583 187821981 -65434602 + MLT1A1 LTR MaLR 1 365 0 482 261 154 64 chr2 187821981 187822044 -65434539 - MLT1H LTR MaLR -418 131 75 39422 59 5 8 chr2 187822076 187828239 -65428344 + L1PA5 LINE L1 12 6153 -1 1235 191 44 85 chr2 187832146 187832487 -65424096 + MER46C DNA MER2_type 4 330 -8 674 172 48 32 chr2 187837609 187837795 -65418788 + MER53 DNA DNA 1 189 0 21 36 0 0 chr2 187838511 187838539 -65418044 + AT_rich Low_complexity Low_complexity 1 28 0 596 250 204 0 chr2 187840999 187841171 -65415412 - MIR SINE MIR -53 209 3 * 770 314 175 62 chr2 187841171 187842193 -65414390 + L3 LINE CR1 434 1570 -7 601 262 15 58 chr2 187842255 187842453 -65414130 + MIR SINE MIR 18 207 -55 192 250 0 0 chr2 187842833 187842881 -65413702 - MIR SINE MIR -56 206 159 2025 120 7 3 chr2 187843188 187843488 -65413095 - AluSx SINE Alu -11 301 1 27 29 0 0 chr2 187844082 187844116 -65412467 + AT_rich Low_complexity Low_complexity 1 34 0 7695 19 0 0 chr2 187844136 187845355 -65411228 - L1PA2 LINE L1 -2 6153 4931 773 256 91 91 chr2 187845669 187846177 -65410406 + L1MC4a LINE L1 5421 5928 -1880 183 222 0 0 chr2 187846178 187846223 -65410360 + (TATG)n Simple_repeat Simple_repeat 1 45 0 2390 58 0 3 chr2 187846373 187846665 -65409918 - AluY SINE Alu -10 301 11 181 282 0 0 chr2 187848325 187848364 -65408219 + MER5B DNA MER1_type 7 45 -133 825 228 0 0 chr2 187848364 187848535 -65408048 - FRAM SINE Alu -5 171 1 313 252 176 17 chr2 187848536 187848655 -65407928 + MER5B DNA MER1_type 41 178 0 426 296 134 16 chr2 187848784 187848970 -65407613 + MIR SINE MIR 29 236 -26 306 263 158 9 chr2 187849898 187850012 -65406571 + MER94 DNA DNA 4 134 0 2168 140 30 21 chr2 187850141 187850513 -65406070 - THE1C LTR MaLR 0 375 1 262 413 39 0 chr2 187851681 187851836 -65404747 + MIR3 SINE MIR 17 177 -31 32 26 0 0 chr2 187852928 187852967 -65403616 + AT_rich Low_complexity Low_complexity 1 39 0 210 297 57 108 chr2 187853186 187853398 -65403185 + MIR SINE MIR 10 210 -52 425 299 81 0 chr2 187853595 187853769 -65402814 - MIR SINE MIR -16 246 59 22 0 0 0 chr2 187853784 187853806 -65402777 + AT_rich Low_complexity Low_complexity 1 22 0 445 147 0 39 chr2 187854233 187854362 -65402221 + (TA)n Simple_repeat Simple_repeat 1 124 0 325 248 19 9 chr2 187854666 187854771 -65401812 + (TA)n Simple_repeat Simple_repeat 2 107 0 21 0 0 0 chr2 187855839 187855860 -65400723 + AT_rich Low_complexity Low_complexity 1 21 0 2095 123 0 0 chr2 187855860 187856145 -65400438 - AluSx SINE Alu -23 289 5 23 33 0 0 chr2 187856346 187856376 -65400207 + AT_rich Low_complexity Low_complexity 1 30 0 303 286 117 51 chr2 187856400 187856673 -65399910 - L1ME2 LINE L1 -66 6167 5877 287 29 0 0 chr2 187856683 187856717 -65399866 - MADE1 DNA Mariner -46 34 1 278 288 96 8 chr2 187856740 187856865 -65399718 - L1ME2 LINE L1 -392 5847 5712 223 284 148 0 chr2 187856942 187857023 -65399560 + L2 LINE L2 3221 3313 0 1061 272 74 31 chr2 187857026 187858555 -65398028 - L1ME2 LINE L1 -585 5654 3953 279 254 153 24 chr2 187858582 187858791 -65397792 - L1ME2 LINE L1 -2368 3847 3612 365 304 38 22 chr2 187858817 187859001 -65397582 - L1ME2 LINE L1 -2687 3528 3342 238 226 108 10 chr2 187859002 187859104 -65397479 - L1ME2 LINE L1 -3710 2505 2394 1431 206 7 31 chr2 187859107 187859393 -65397190 + AluJo SINE Alu 1 279 -33 306 235 53 82 chr2 187859442 187859612 -65396971 - L1ME2 LINE L1 -4048 2348 2184 620 159 43 12 chr2 187859616 187859779 -65396804 + C-rich Low_complexity Low_complexity 1 168 0 189 0 0 0 chr2 187861204 187861225 -65395358 + (CA)n Simple_repeat Simple_repeat 2 22 0 598 158 92 17 chr2 187861334 187861454 -65395129 - FLAM_C SINE Alu -3 130 2 233 176 47 12 chr2 187861626 187861711 -65394872 + (TA)n Simple_repeat Simple_repeat 2 89 0 229 193 46 18 chr2 187861745 187861854 -65394729 + (TA)n Simple_repeat Simple_repeat 2 113 0 1597 188 27 10 chr2 187862427 187862725 -65393858 - AluJo SINE Alu -9 303 1 225 132 0 0 chr2 187862737 187862775 -65393808 + (TC)n Simple_repeat Simple_repeat 1 38 0 868 277 159 90 chr2 187863080 187863633 -65392950 - MLT1G LTR MaLR -4 586 1 30 45 0 0 chr2 187864389 187864433 -65392150 + AT_rich Low_complexity Low_complexity 1 44 0 1966 122 27 17 chr2 187865214 187865510 -65391073 - AluSx SINE Alu -11 301 3 595 289 74 11 chr2 187865712 187865943 -65390640 + MIR SINE MIR 12 252 -10 600 286 153 32 chr2 187866439 187866876 -65389707 - L2 LINE L2 0 3313 2824 2409 181 2 14 chr2 187866941 187867362 -65389221 - MER47B DNA MER2_type -1 417 2 508 286 156 0 chr2 187867417 187867571 -65389012 - MER5A DNA MER1_type -3 186 9 205 403 39 17 chr2 187867582 187867763 -65388820 - L2 LINE L2 -722 2592 2408 182 323 31 0 chr2 187867811 187867907 -65388676 - L2 LINE L2 -1945 1369 1271 917 146 39 98 chr2 187868109 187868314 -65388269 - LTR32 LTR ERVL 0 471 279 327 121 52 17 chr2 187868318 187868376 -65388207 - LTR32 LTR ERVL -133 338 279 1828 145 26 22 chr2 187868389 187868700 -65387883 - LTR32 LTR ERVL -147 324 13 604 278 45 15 chr2 187868700 187868898 -65387685 - HERVL32 LTR ERVL 0 3418 3215 352 263 11 11 chr2 187868987 187869082 -65387501 - PABL_B-int LTR ERV1 -452 6670 6576 254 194 97 0 chr2 187870820 187870882 -65385701 - HERVL32 LTR ERVL -818 2600 2533 8543 232 22 62 chr2 187870885 187871733 -65384850 - HERVL32 LTR ERVL -989 2429 1548 1503 152 134 27 chr2 187871733 187872062 -65384521 - THE1B LTR MaLR 0 364 1 8543 232 22 62 chr2 187872062 187873745 -65382838 - HERVL32 LTR ERVL -1870 1548 1 2005 155 115 42 chr2 187873745 187874171 -65382412 - LTR32 LTR ERVL 0 471 15 826 235 51 18 chr2 187874265 187874482 -65382101 + MER58A DNA MER1_type 1 224 0 550 338 137 5 chr2 187874676 187875069 -65381514 - L2 LINE L2 -2577 737 293 359 243 85 23 chr2 187875707 187875884 -65380699 - L1ME4a LINE L1 -1 6120 5933 264 285 77 8 chr2 187875963 187876093 -65380490 - L1ME4a LINE L1 -296 5825 5687 261 360 29 47 chr2 187876094 187876266 -65380317 + L2 LINE L2 2690 2858 -456 1087 285 142 19 chr2 187876579 187877327 -65379256 - L2 LINE L2 -1 3312 2451 562 29 0 0 chr2 187878016 187878085 -65378498 - L1PA5 LINE L1 -6 6148 6080 332 264 181 32 chr2 187878641 187878796 -65377787 + MIR SINE MIR 85 262 0 2147 113 3 3 chr2 187879134 187879444 -65377139 - AluY SINE Alu -1 310 1 183 146 0 0 chr2 187880094 187880135 -65376448 + (TG)n Simple_repeat Simple_repeat 2 42 0 480 204 28 9 chr2 187880169 187880277 -65376306 + L1MB3 LINE L1 5987 6096 -87 1011 151 22 5 chr2 187880883 187881068 -65375515 + L1MB3 LINE L1 5987 6174 -9 3178 36 26 0 chr2 187881983 187882371 -65374212 - L1PA5 LINE L1 -1 6153 5756 1890 165 31 20 chr2 187882589 187882946 -65373637 - THE1C LTR MaLR 0 375 15 207 0 0 0 chr2 187883826 187883849 -65372734 + (A)n Simple_repeat Simple_repeat 1 23 0 1978 195 56 66 chr2 187883927 187884908 -65371675 - L1MB8 LINE L1 -60 6118 5072 351 113 0 0 chr2 187885166 187885219 -65371364 + (TCC)n Simple_repeat Simple_repeat 2 54 0 2237 117 3 3 chr2 187885219 187885528 -65371055 - AluSx SINE Alu -3 309 1 22 0 0 0 chr2 187886053 187886075 -65370508 + AT_rich Low_complexity Low_complexity 1 22 0 427 216 45 11 chr2 187887122 187887210 -65369373 - MER5A DNA MER1_type -84 105 15 377 341 0 0 chr2 187887832 187887958 -65368625 - MIR3 SINE MIR -24 184 59 1832 142 33 3 chr2 187887974 187888304 -65368279 + L1MA4 LINE L1 5952 6291 -9 33 0 0 0 chr2 187888304 187888337 -65368246 + AT_rich Low_complexity Low_complexity 1 33 0 584 181 11 73 chr2 187888342 187888519 -65368064 + MER53 DNA DNA 21 186 -3 234 321 113 19 chr2 187888610 187888716 -65367867 + L2 LINE L2 3192 3307 -6 416 263 263 0 chr2 187889349 187889520 -65367063 - MIR SINE MIR 0 262 47 1140 216 57 4 chr2 187889623 187889850 -65366733 - MER8 DNA MER2_type 0 239 1 1066 260 106 61 chr2 187890036 187890349 -65366234 - LTR33 LTR ERVL -2 519 175 387 0 0 0 chr2 187890349 187890392 -65366191 + (CA)n Simple_repeat Simple_repeat 2 44 0 1066 260 106 61 chr2 187890392 187890570 -65366013 - LTR33 LTR ERVL -346 175 6 1033 124 6 17 chr2 187891324 187891502 -65365081 + L1MA8 LINE L1 5973 6148 -143 273 29 0 0 chr2 187891651 187891685 -65364898 + (TTG)n Simple_repeat Simple_repeat 2 35 0 680 159 0 0 chr2 187891715 187891822 -65364761 - FLAM_A SINE Alu -34 108 2 267 301 41 0 chr2 187892161 187892234 -65364349 - MIR SINE MIR -76 186 111 489 294 49 25 chr2 187892323 187892527 -65364056 - MIR SINE MIR -41 221 13 209 244 0 0 chr2 187893605 187893650 -65362933 - MIR3 SINE MIR -53 155 111 195 311 33 0 chr2 187894473 187894534 -65362049 - L2 LINE L2 -20 3293 3231 2271 104 0 0 chr2 187896400 187896698 -65359885 + AluSq SINE Alu 1 298 -15 2071 93 31 10 chr2 187896780 187897071 -65359512 - AluSq SINE Alu -16 297 1 225 65 0 0 chr2 187897401 187897432 -65359151 + (TG)n Simple_repeat Simple_repeat 2 32 0 547 263 36 49 chr2 187898199 187898423 -65358160 - L1ME LINE L1 -395 5726 5506 305 267 18 69 chr2 187899160 187899332 -65357251 + MIR SINE MIR 25 187 -70 922 267 94 27 chr2 187899521 187899892 -65356691 - L1ME3A LINE L1 -5 6165 5770 860 205 19 9 chr2 187899900 187900110 -65356473 - L1ME LINE L1 -2144 4002 3791 354 45 0 0 chr2 187900533 187900577 -65356006 + (CAA)n Simple_repeat Simple_repeat 2 45 0 737 126 27 0 chr2 187900795 187900906 -65355677 - MER7A DNA MER2_type 0 336 223 532 191 0 0 chr2 187900905 187901010 -65355573 - MER7A DNA MER2_type -212 134 32 * 1056 265 131 18 chr2 187901462 187901919 -65354664 - MLT1J LTR MaLR 0 511 3 783 144 20 20 chr2 187903308 187903454 -65353129 - MER20 DNA MER1_type -72 147 2 518 259 43 38 chr2 187903463 187903648 -65352935 + L2 LINE L2 2543 2728 -586 1043 43 0 0 chr2 187903667 187903784 -65352799 + AluY SINE Alu 16 132 -179 2447 65 0 0 chr2 187903788 187904081 -65352502 + AluY SINE Alu 1 293 -18 2277 81 3 7 chr2 187904088 187904384 -65352199 + AluSg SINE Alu 1 295 -15 2254 156 33 23 chr2 187904757 187905187 -65351396 + Tigger2a DNA MER2_type 1 434 0 21 0 0 0 chr2 187905781 187905802 -65350781 + AT_rich Low_complexity Low_complexity 1 21 0 459 276 15 22 chr2 187905895 187906029 -65350554 + L2 LINE L2 3181 3313 0 1161 300 146 13 chr2 187906756 187907296 -65349287 - L1MEd LINE L1 -5296 823 212 1853 148 48 25 chr2 187907297 187907654 -65348929 - MLT1A1 LTR MaLR 0 365 1 3754 245 106 42 chr2 187907654 187908861 -65347722 - MLT1A1-int LTR MaLR 0 1735 452 906 278 53 8 chr2 187909076 187909321 -65347262 - MIR SINE MIR -5 257 2 1388 223 50 62 chr2 187909512 187909864 -65346719 - MER63B DNA MER1_type -626 436 88 2661 23 0 3 chr2 187909864 187910166 -65346417 - AluY SINE Alu -10 301 1 1388 223 50 62 chr2 187910166 187910252 -65346331 - MER63B DNA MER1_type -974 88 3 492 216 17 119 chr2 187910684 187910860 -65345723 + MER5B DNA MER1_type 21 178 0 596 260 0 14 chr2 187910890 187911036 -65345547 + MIR SINE MIR 14 157 -105 288 282 164 27 chr2 187913392 187913502 -65343081 + L2 LINE L2 3189 3313 0 248 253 169 0 chr2 187913540 187913623 -65342960 + MIR3 SINE MIR 109 205 -3 342 239 158 53 chr2 187915317 187915601 -65340982 - L1ME4a LINE L1 -116 6005 5692 26 50 0 0 chr2 187916103 187916143 -65340440 + AT_rich Low_complexity Low_complexity 1 40 0 225 299 58 11 chr2 187916268 187916355 -65340228 + MIR3 SINE MIR 85 175 -33 2619 39 0 13 chr2 187916437 187916746 -65339837 - AluY SINE Alu -5 306 2 384 295 52 44 chr2 187917291 187917542 -65339041 + L1M4 LINE L1 3026 3278 -2868 623 146 0 0 chr2 187917689 187917785 -65338798 - MLT1C LTR MaLR 0 467 372 1349 201 75 133 chr2 187917796 187918473 -65338110 - HsTC2c DNA Tc2 -57 672 35 337 157 0 0 chr2 187918570 187918621 -65337962 + MER5A DNA MER1_type 1 51 -138 914 114 35 119 chr2 187918621 187918822 -65337761 - MLT2B3 LTR ERVL 0 554 371 32 67 0 0 chr2 187920607 187920667 -65335916 + AT_rich Low_complexity Low_complexity 1 60 0 2073 122 10 0 chr2 187921099 187921394 -65335189 + AluSq SINE Alu 1 298 -15 190 281 90 34 chr2 187921606 187921695 -65334888 + MIR3 SINE MIR 14 107 -101 343 301 144 0 chr2 187922255 187922408 -65334175 + MIR SINE MIR 50 224 -38 753 173 70 13 chr2 187923369 187923525 -65333058 + MER106B DNA MER1_type 895 1059 0 571 330 13 40 chr2 187923719 187923946 -65332637 + MIR SINE MIR 20 240 -22 228 67 0 0 chr2 187924561 187924591 -65331992 + (TC)n Simple_repeat Simple_repeat 2 31 0 508 311 129 25 chr2 187926554 187926872 -65329711 - LTR33 LTR ERVL -1 520 170 358 333 0 33 chr2 187927116 187927236 -65329347 - L2 LINE L2 -2 3311 3196 25 0 0 0 chr2 187928531 187928556 -65328027 + AT_rich Low_complexity Low_complexity 1 25 0 231 185 62 46 chr2 187930090 187930155 -65326428 - L2 LINE L2 0 3313 3248 183 333 77 49 chr2 187930382 187930565 -65326018 + L2 LINE L2 1323 1510 -1804 1322 237 93 29 chr2 187930714 187931876 -65324707 - L1MC4 LINE L1 -181 7861 6462 386 101 14 0 chr2 187932834 187932903 -65323680 + L1MA4A LINE L1 6230 6299 -4 195 315 27 27 chr2 187933637 187933710 -65322873 - L2 LINE L2 0 3313 3241 2082 129 10 0 chr2 187933734 187934043 -65322540 - AluSq SINE Alu -1 312 1 256 310 110 7 chr2 187934044 187934199 -65322384 - L2 LINE L2 -601 2713 2543 230 236 45 11 chr2 187935811 187935900 -65320683 + MIR SINE MIR 153 244 -18 1146 244 41 9 chr2 187936311 187936665 -65319918 - L1MD2 LINE L1 -27 6139 5790 3928 231 35 14 chr2 187936668 187937643 -65318940 - Charlie1a DNA MER1_type -459 996 2 306 259 135 43 chr2 187937661 187937846 -65318737 + L3b LINE CR1 1128 1329 -254 26 0 0 0 chr2 187938597 187938623 -65317960 + AT_rich Low_complexity Low_complexity 1 26 0 316 250 67 25 chr2 187939568 187939688 -65316895 - L1MC4 LINE L1 0 8042 7918 2059 259 78 21 chr2 187939778 187940539 -65316044 - L1MC4 LINE L1 -149 7893 7090 1193 147 66 9 chr2 187940623 187940888 -65315695 - L1MA7 LINE L1 0 6312 6014 1588 198 3 29 chr2 187940926 187941239 -65315344 - AluJb SINE Alu -7 305 1 1298 237 119 62 chr2 187941247 187941892 -65314691 - L1MC4a LINE L1 -855 6953 6272 753 111 32 0 chr2 187941942 187942068 -65314515 - L1MB1 LINE L1 -1 6167 6038 340 341 65 0 chr2 187942377 187942440 -65314143 + MIR SINE MIR 2 59 -203 189 0 0 0 chr2 187942440 187942461 -65314122 + (CACCC)n Simple_repeat Simple_repeat 3 23 0 340 341 65 0 chr2 187942461 187942535 -65314048 + MIR SINE MIR 59 148 -114 3992 212 77 45 chr2 187943512 187944630 -65311953 + MER69B DNA AcHobo 12 1165 -61 6992 55 11 1 chr2 187944630 187945007 -65311576 - L1PA6 LINE L1 0 6154 5782 2252 97 0 40 chr2 187945007 187945328 -65311255 - AluY SINE Alu -3 308 1 6992 55 11 1 chr2 187945328 187946361 -65310222 - L1PA6 LINE L1 -372 5782 4748 28448 106 10 16 chr2 187946376 187950622 -65305961 - L1PA6 LINE L1 -1910 4236 15 346 232 0 24 chr2 187950622 187950704 -65305879 + MER69B DNA AcHobo 1144 1223 -3 1316 228 66 64 chr2 187950988 187951524 -65305059 + L1MC5 LINE L1 6715 7250 -736 1289 226 77 66 chr2 187951603 187952254 -65304329 + L1MC5 LINE L1 7251 7908 -53 746 192 192 0 chr2 187952430 187952602 -65303981 + MER63A DNA MER1_type 1 205 -5 285 317 94 28 chr2 187952632 187952812 -65303771 + MIR SINE MIR 32 223 -39 440 231 59 53 chr2 187953927 187954096 -65302487 - MER112 DNA MER1_type -52 208 39 192 163 0 0 chr2 187954744 187954787 -65301796 + (TA)n Simple_repeat Simple_repeat 1 43 0 585 281 54 97 chr2 187956314 187956780 -65299803 - LTR67 LTR ERVL -3 554 109 658 279 50 5 chr2 187958557 187958758 -65297825 - MER63A DNA MER1_type 0 210 1 1501 191 15 63 chr2 187959798 187960133 -65296450 - MER92C LTR ERV1 -35 519 201 334 180 16 0 chr2 187960190 187960251 -65296332 - MIR SINE MIR -135 127 66 506 213 8 16 chr2 187962324 187962451 -65294132 + L1PB4 LINE L1 6017 6142 -14 863 237 11 0 chr2 187962463 187962649 -65293934 + MER5A DNA MER1_type 2 189 0 1818 167 0 3 chr2 187963315 187963609 -65292974 + AluJo SINE Alu 1 293 -19 1343 132 0 5 chr2 187963645 187963834 -65292749 + AluSg/x SINE Alu 105 292 -20 722 236 167 37 chr2 187963902 187964118 -65292465 - MIR SINE MIR -2 260 17 304 274 68 0 chr2 187964204 187964321 -65292262 - L1ME4a LINE L1 -1 6120 5996 236 341 81 0 chr2 187964340 187964463 -65292120 - MER5A DNA MER1_type -6 183 51 813 225 81 0 chr2 187964671 187964844 -65291739 - MER5A DNA MER1_type -1 188 2 325 284 0 0 chr2 187965784 187965865 -65290718 - L2 LINE L2 -4 3309 3229 14546 139 37 20 chr2 187965872 187968222 -65288361 + L1MA3 LINE L1 17 2407 -5158 10473 152 30 8 chr2 187968250 187971240 -65285343 + L1MA3 LINE L1 4673 7719 -5 477 0 0 0 chr2 187971280 187971333 -65285250 + (CA)n Simple_repeat Simple_repeat 2 54 0 384 277 156 7 chr2 187971415 187971556 -65285027 + MER5A DNA MER1_type 28 189 0 2195 117 3 3 chr2 187971968 187972267 -65284316 + AluSq SINE Alu 7 305 -8 1991 91 190 19 chr2 187972591 187972955 -65283628 - MSTA LTR MaLR -2 426 1 260 306 57 0 chr2 187973354 187973478 -65283105 + L1ME4a LINE L1 5986 6116 -5 33 0 0 0 chr2 187975511 187975544 -65281039 + AT_rich Low_complexity Low_complexity 1 33 0 369 279 89 65 chr2 187976820 187977067 -65279516 - MIR SINE MIR -8 254 2 1655 86 5 18 chr2 187977677 187977898 -65278685 + AluSx SINE Alu 1 218 -94 189 364 57 0 chr2 187979347 187979435 -65277148 - L2 LINE L2 -44 3228 3136 21 57 0 0 chr2 187980661 187980696 -65275887 + AT_rich Low_complexity Low_complexity 1 35 0 195 326 54 43 chr2 187980899 187980991 -65275592 + MIR SINE MIR 36 128 -80 526 168 56 19 chr2 187981011 187981118 -65275465 - MER7A DNA MER2_type -237 109 1 1366 193 32 99 chr2 187982942 187983517 -65273066 + MLT1-int LTR MaLR 7 662 -709 587 294 37 5 chr2 187983619 187983806 -65272777 + MLT1-int LTR MaLR 692 884 -487 747 176 25 33 chr2 187983929 187984100 -65272483 + MLT1E3 LTR MaLR 441 619 -5 408 114 0 89 chr2 187984308 187984387 -65272196 - AluJ/FRAM SINE Alu -10 302 231 795 189 0 50 chr2 187984395 187984554 -65272029 + AluJb SINE Alu 154 304 -8 784 243 17 0 chr2 187985205 187985378 -65271205 + AluJb SINE Alu 135 310 -2 423 220 144 8 chr2 187986299 187986417 -65270166 - MER94 DNA DNA 0 134 1 207 0 0 0 chr2 187989048 187989071 -65267512 + (TG)n Simple_repeat Simple_repeat 2 24 0 1695 142 75 33 chr2 187989214 187989574 -65267009 - THE1C LTR MaLR 0 375 1 400 350 96 5 chr2 187989791 187989988 -65266595 - MIR SINE MIR -27 235 21 271 243 82 47 chr2 187990023 187990183 -65266400 - MIR SINE MIR -69 139 6 2000 86 0 0 chr2 187991828 187992095 -65264488 + AluY SINE Alu 41 307 -4 2386 86 0 7 chr2 187993117 187993419 -65263164 - AluSg SINE Alu -10 300 1 462 252 25 57 chr2 187993584 187993743 -65262840 + MIR3 SINE MIR 7 160 -48 182 388 50 0 chr2 187993773 187993853 -65262730 - L2 LINE L2 -50 3222 3139 316 316 89 25 chr2 187994209 187994367 -65262216 - L2 LINE L2 -557 2757 2590 464 312 234 8 chr2 187995033 187995511 -65261072 + L2 LINE L2 1803 2388 -926 259 367 25 61 chr2 187995532 187995777 -65260806 + L2 LINE L2 2848 3083 -189 968 149 42 89 chr2 187995854 187996068 -65260515 + MER20 DNA MER1_type 16 219 0 498 270 71 0 chr2 187996094 187996220 -65260363 + L2 LINE L2 3137 3271 -1 352 279 227 29 chr2 187996591 187996763 -65259820 + MIR SINE MIR 51 256 -6 352 261 42 42 chr2 187996831 187996950 -65259633 - MLT1J LTR MaLR -47 464 346 1672 127 4 4 chr2 187997078 187997331 -65259252 + AluSq SINE Alu 53 305 -8 686 195 19 13 chr2 187997331 187997485 -65259098 + L1MC3 LINE L1 7630 7784 -1 308 309 0 0 chr2 187997548 187997629 -65258954 + L2 LINE L2 3189 3269 -44 213 378 0 0 chr2 187998028 187998110 -65258473 + MIR SINE MIR 48 129 -133 729 232 94 0 chr2 187998322 187998503 -65258080 - MLT1J LTR MaLR -239 272 75 189 326 0 0 chr2 187998554 187998600 -65257983 + MIR SINE MIR 205 250 -12 1280 187 68 65 chr2 187999366 187999735 -65256848 - MLT1A2 LTR MaLR -4 370 1 252 343 64 35 chr2 187999983 188000155 -65256428 - MIR SINE MIR -40 222 46 596 244 91 32 chr2 188000199 188000420 -65256163 + MIR SINE MIR 29 262 0 216 231 296 28 chr2 188001875 188001983 -65254600 + L2 LINE L2 3173 3309 -4 250 288 42 59 chr2 188003737 188003855 -65252728 + L2 LINE L2 3157 3272 0 199 389 48 16 chr2 188003851 188003977 -65252606 - L2 LINE L2 -554 2760 2631 * 233 349 106 19 chr2 188005004 188005316 -65251267 - L2 LINE L2 -994 2320 1982 22 35 0 0 chr2 188006562 188006591 -65249992 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 188006802 188006824 -65249759 + AT_rich Low_complexity Low_complexity 1 22 0 408 331 22 39 chr2 188007774 188007952 -65248631 + L2 LINE L2 3098 3272 0 367 266 73 9 chr2 188007959 188008068 -65248515 - MER115 DNA AcHobo -148 545 430 415 305 75 45 chr2 188008163 188008363 -65248220 - MER115 DNA AcHobo -415 278 73 402 274 26 9 chr2 188008880 188008993 -65247590 + MIR3 SINE MIR 69 183 -25 21 36 0 0 chr2 188009232 188009260 -65247323 + AT_rich Low_complexity Low_complexity 1 28 0 480 301 153 0 chr2 188009566 188009762 -65246821 - MIR SINE MIR -6 256 31 802 295 16 4 chr2 188010943 188011201 -65245382 + MIR SINE MIR 2 262 0 830 285 182 22 chr2 188011709 188012456 -65244127 - L2 LINE L2 0 3313 2446 319 280 43 0 chr2 188012534 188012627 -65243956 - L2 LINE L2 -24 3289 3193 2308 90 3 6 chr2 188012960 188013271 -65243312 + AluSx SINE Alu 1 310 -2 245 331 154 8 chr2 188014108 188014238 -65242345 - L2 LINE L2 -3 3269 3121 221 358 41 0 chr2 188014373 188014496 -65242087 - L2 LINE L2 -211 3061 2934 194 402 41 0 chr2 188014540 188014637 -65241946 - L2 LINE L2 -5 3267 3167 397 333 86 18 chr2 188014756 188014978 -65241605 - MIR SINE MIR 0 262 26 196 341 49 0 chr2 188014980 188015062 -65241521 - L2 LINE L2 -547 2767 2682 198 317 66 92 chr2 188015172 188015443 -65241140 - L2 LINE L2 -807 2507 2244 1152 160 5 0 chr2 188015945 188016133 -65240450 - MER5A DNA MER1_type 0 189 1 185 35 69 0 chr2 188019479 188019508 -65237075 + (CAGAGA)n Simple_repeat Simple_repeat 6 36 0 1949 188 50 26 chr2 188020054 188020512 -65236071 + L1MA9 LINE L1 5797 6265 -47 910 179 30 6 chr2 188022275 188022443 -65234140 + L1PA16 LINE L1 5976 6147 -19 523 158 58 6 chr2 188022474 188022645 -65233938 + (TA)n Simple_repeat Simple_repeat 1 180 0 21 36 0 0 chr2 188022686 188022714 -65233869 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 188023116 188023138 -65233445 + AT_rich Low_complexity Low_complexity 1 22 0 2512 228 79 52 chr2 188024690 188025536 -65231047 - L1ME3A LINE L1 -28 6142 5274 240 278 104 9 chr2 188025557 188025672 -65230911 - L1ME3A LINE L1 -1006 5140 5015 540 358 16 20 chr2 188026017 188026263 -65230320 - MIR SINE MIR -1 261 17 21 0 0 0 chr2 188026292 188026313 -65230270 + AT_rich Low_complexity Low_complexity 1 21 0 642 266 95 22 chr2 188026520 188026742 -65229841 + MIR SINE MIR 25 262 0 709 201 37 119 chr2 188027090 188027359 -65229224 + MIR SINE MIR 6 252 -10 658 333 68 45 chr2 188028618 188029218 -65227365 - L2 LINE L2 -205 3067 2438 541 170 0 2 chr2 188029220 188029333 -65227250 + L1MA8 LINE L1 6142 6244 -47 21 57 0 0 chr2 188029333 188029368 -65227215 + AT_rich Low_complexity Low_complexity 1 35 0 598 137 17 171 chr2 188029368 188029543 -65227040 - MER5B DNA MER1_type -30 148 1 298 226 16 0 chr2 188030397 188030459 -65226124 + MER94 DNA DNA 72 134 0 1570 253 72 32 chr2 188030508 188031093 -65225490 + L1ME3A LINE L1 4561 5121 -1049 10954 165 22 2 chr2 188031093 188033924 -65222659 + L1PA14 LINE L1 3326 6159 -2 1570 253 72 32 chr2 188033924 188034481 -65222102 + L1ME3A LINE L1 5121 5743 -427 544 245 126 75 chr2 188034511 188034805 -65221778 + L1ME3A LINE L1 5853 6161 -9 5583 129 52 9 chr2 188034837 188035759 -65220824 + Tigger1 DNA MER2_type 1457 2418 0 180 152 0 0 chr2 188036126 188036159 -65220424 + T-rich Low_complexity Low_complexity 1 33 0 588 267 139 0 chr2 188036190 188036370 -65220213 - L1ME LINE L1 -426 5695 5491 375 316 97 58 chr2 188036441 188036770 -65219813 - L1ME LINE L1 -748 5398 5057 26 0 0 0 chr2 188036770 188036796 -65219787 + AT_rich Low_complexity Low_complexity 1 26 0 189 171 0 0 chr2 188037632 188037667 -65218916 + (CA)n Simple_repeat Simple_repeat 2 36 0 189 350 62 0 chr2 188039830 188039910 -65216673 - MER5A DNA MER1_type -18 171 87 201 192 0 39 chr2 188039832 188039884 -65216699 + MER5B DNA MER1_type 21 70 -108 507 276 22 0 chr2 188040158 188040292 -65216291 + MIR3 SINE MIR 58 194 -14 480 174 143 0 chr2 188040988 188041086 -65215497 + MER96B DNA MER1_type? 1 112 -305 941 185 60 26 chr2 188041089 188041202 -65215381 - MER96B DNA MER1_type? -176 241 133 2038 126 10 17 chr2 188041202 188041503 -65215080 - AluSq SINE Alu -14 299 1 941 185 60 26 chr2 188041503 188041621 -65214962 - MER96B DNA MER1_type? -284 133 2 2423 84 3 3 chr2 188041807 188042116 -65214467 - AluSq SINE Alu -4 309 1 190 27 0 81 chr2 188042251 188042288 -65214295 + (GGGAA)n Simple_repeat Simple_repeat 3 36 0 238 346 176 7 chr2 188042309 188042462 -65214121 - MER5A DNA MER1_type -4 185 7 255 360 56 16 chr2 188042524 188042701 -65213882 - MIR3 SINE MIR -59 149 5 1811 155 61 22 chr2 188042809 188043170 -65213413 + THE1C LTR MaLR 1 375 0 24 53 0 0 chr2 188043713 188043751 -65212832 + AT_rich Low_complexity Low_complexity 1 38 0 242 178 41 41 chr2 188044312 188044385 -65212198 - L2 LINE L2 -1049 2265 2193 410 299 108 12 chr2 188046309 188046476 -65210107 + MIR SINE MIR 75 257 -5 3117 217 98 51 chr2 188046638 188047993 -65208590 - L1MC5 LINE L1 -50 7911 6497 22 35 0 0 chr2 188048284 188048313 -65208270 + AT_rich Low_complexity Low_complexity 1 29 0 456 314 16 2 chr2 188049001 188049163 -65207420 + MIR SINE MIR 18 144 -64 22 56 0 0 chr2 188049973 188050009 -65206574 + AT_rich Low_complexity Low_complexity 1 36 0 431 278 99 47 chr2 188050144 188050508 -65206075 - L1MC5 LINE L1 -48 7913 7531 212 343 56 37 chr2 188051004 188051112 -65205471 + L2 LINE L2 3127 3236 -36 238 336 192 14 chr2 188051493 188051639 -65204944 - L3b LINE CR1 -164 1419 1248 659 269 64 0 chr2 188052477 188052648 -65203935 - MIR SINE MIR -66 196 15 21 0 0 0 chr2 188052931 188052952 -65203631 + AT_rich Low_complexity Low_complexity 1 21 0 902 267 42 0 chr2 188053944 188054184 -65202399 + MIR SINE MIR 13 262 0 190 346 138 8 chr2 188054251 188054381 -65202202 + L2 LINE L2 2902 3048 -224 900 285 166 19 chr2 188054426 188054889 -65201694 + MLT1G1 LTR MaLR 65 595 0 24 32 0 0 chr2 188054962 188054993 -65201590 + AT_rich Low_complexity Low_complexity 1 31 0 701 232 116 20 chr2 188055018 188055216 -65201367 + MIR SINE MIR 46 262 0 414 252 75 46 chr2 188055392 188055698 -65200885 + L1ME3A LINE L1 5015 5329 -817 371 289 181 0 chr2 188056108 188056257 -65200326 - MIR SINE MIR -81 181 6 603 271 119 53 chr2 188056278 188056750 -65199833 + L1ME3A LINE L1 5381 5883 -287 1942 109 56 0 chr2 188056766 188057033 -65199550 + AluSx SINE Alu 1 282 -30 2504 77 0 0 chr2 188057064 188057375 -65199208 + AluY SINE Alu 1 311 0 237 65 0 0 chr2 188057376 188057407 -65199176 + (GGAA)n Simple_repeat Simple_repeat 2 32 0 225 0 0 0 chr2 188057478 188057503 -65199080 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 2338 54 0 0 chr2 188057503 188057782 -65198801 - AluY SINE Alu -32 279 1 304 283 64 86 chr2 188059753 188060113 -65196470 - L1ME4a LINE L1 -3 6118 5767 771 114 35 0 chr2 188060189 188060303 -65196280 + L1PA15-16 LINE L1 1 118 -6731 * 4928 179 24 6 chr2 188060293 188062153 -65194430 + L1PA16 LINE L1 4175 6057 -109 404 345 64 25 chr2 188062246 188062698 -65193885 - L1ME4a LINE L1 -694 5427 4954 21 0 0 0 chr2 188062840 188062861 -65193722 + AT_rich Low_complexity Low_complexity 1 21 0 711 296 61 6 chr2 188063189 188063550 -65193033 + L1ME4a LINE L1 5509 5889 -232 227 253 53 0 chr2 188064399 188064474 -65192109 + L1ME4a LINE L1 6000 6078 -43 2175 274 119 21 chr2 188065103 188065454 -65191129 + L2 LINE L2 1855 2170 -1144 180 0 0 0 chr2 188065454 188065474 -65191109 + (CA)n Simple_repeat Simple_repeat 2 21 0 2175 274 119 21 chr2 188065474 188066006 -65190577 + L2 LINE L2 2170 2824 -490 225 0 0 0 chr2 188067116 188067141 -65189442 + (TG)n Simple_repeat Simple_repeat 2 26 0 294 286 0 0 chr2 188067182 188067259 -65189324 + (TG)n Simple_repeat Simple_repeat 2 78 0 302 232 21 21 chr2 188067491 188067586 -65188997 + (TG)n Simple_repeat Simple_repeat 2 96 0 369 0 0 0 chr2 188068485 188068526 -65188057 + (CA)n Simple_repeat Simple_repeat 2 42 0 398 293 268 0 chr2 188070023 188070228 -65186355 + MIR SINE MIR 2 261 -1 360 0 0 0 chr2 188070522 188070562 -65186021 + (TG)n Simple_repeat Simple_repeat 2 41 0 212 184 0 0 chr2 188070562 188070600 -65185983 + (TA)n Simple_repeat Simple_repeat 2 39 0 8744 77 0 1 chr2 188071626 188072824 -65183759 - L1P LINE L1 -2927 3219 2023 351 217 0 0 chr2 188072825 188072908 -65183675 - L1P LINE L1 -4078 2068 1986 189 250 0 0 chr2 188073101 188073161 -65183422 + (TATATG)n Simple_repeat Simple_repeat 4 63 0 338 266 115 106 chr2 188073199 188073755 -65182828 - L1M4 LINE L1 -2629 3517 2957 25 0 0 0 chr2 188076675 188076700 -65179883 + AT_rich Low_complexity Low_complexity 1 25 0 537 345 99 22 chr2 188076938 188077382 -65179201 - MLT1K LTR MaLR 0 588 111 25 31 0 0 chr2 188077644 188077676 -65178907 + AT_rich Low_complexity Low_complexity 1 32 0 190 365 73 30 chr2 188080231 188080464 -65176119 - L2 LINE L2 -346 2968 2726 42 86 0 0 chr2 188080565 188080670 -65175913 + AT_rich Low_complexity Low_complexity 1 105 0 1319 217 162 59 chr2 188080797 188081286 -65175297 - L1ME3A LINE L1 -12 6158 5620 233 182 18 0 chr2 188081984 188082039 -65174544 + GA-rich Low_complexity Low_complexity 2 57 0 5111 174 47 27 chr2 188082406 188082580 -65174003 + L1MC2 LINE L1 4921 5090 -1254 2492 53 0 0 chr2 188082580 188082879 -65173704 - AluY SINE Alu -12 299 1 5111 174 47 27 chr2 188082879 188084109 -65172474 + L1MC2 LINE L1 5090 6337 -7 382 259 268 0 chr2 188084268 188084473 -65172110 - MIR SINE MIR -1 261 2 209 298 170 35 chr2 188084798 188084969 -65171614 + MIR3 SINE MIR 7 200 -8 264 224 0 0 chr2 188086142 188086209 -65170374 + (TATATG)n Simple_repeat Simple_repeat 2 68 0 2872 282 77 29 chr2 188086721 188088111 -65168472 + L1MC4a LINE L1 6101 7557 -251 240 221 35 12 chr2 188088121 188088207 -65168376 + L1MC4 LINE L1 7689 7776 -266 578 220 21 32 chr2 188088218 188088404 -65168179 + L1MC4 LINE L1 7829 8012 -30 208 328 96 18 chr2 188088622 188088879 -65167704 + L2 LINE L2 2775 3059 -254 381 179 13 0 chr2 188088954 188089032 -65167551 - L1MB1 LINE L1 -6 6162 6084 975 149 0 21 chr2 188089032 188089220 -65167363 + L1MB1 LINE L1 5760 5943 -225 2808 16 0 0 chr2 188089575 188089884 -65166699 - AluYb8 SINE Alu -9 309 1 1071 276 84 18 chr2 188092665 188093154 -65163429 - LTR33 LTR ERVL 0 521 1 352 346 49 16 chr2 188093430 188093615 -65162968 - L2 LINE L2 -528 2786 2596 240 326 99 7 chr2 188093735 188093876 -65162707 + L2 LINE L2 2461 2614 -700 1112 178 33 9 chr2 188094587 188094800 -65161783 - MER20 DNA MER1_type -1 218 1 540 246 126 11 chr2 188095028 188095203 -65161380 + MIR SINE MIR 18 212 -50 187 283 22 0 chr2 188095834 188095880 -65160703 + L2 LINE L2 2925 2971 -342 443 299 29 7 chr2 188097244 188097381 -65159202 + MIR3 SINE MIR 62 201 -7 392 305 133 24 chr2 188097393 188097603 -65158980 + MIR SINE MIR 28 260 -2 480 226 10 0 chr2 188099804 188099906 -65156677 - MER5A DNA MER1_type -78 111 9 318 257 43 68 chr2 188099926 188100104 -65156479 + MIR SINE MIR 40 216 -46 272 331 21 42 chr2 188100492 188100634 -65155949 - MIR3 SINE MIR -59 149 11 376 328 58 6 chr2 188101983 188102157 -65154426 - MIR SINE MIR 0 262 80 186 229 0 0 chr2 188102417 188102452 -65154131 - MIR SINE MIR -106 102 68 286 366 120 17 chr2 188102760 188102935 -65153648 - L2 LINE L2 -4 3268 3076 894 312 40 15 chr2 188103327 188103651 -65152932 - L3 LINE CR1 -25 1552 1221 396 290 132 69 chr2 188104184 188104646 -65151937 - L1M2 LINE L1 -5768 1081 591 21 36 0 0 chr2 188104646 188104674 -65151909 + GC_rich Low_complexity Low_complexity 1 28 0 730 96 0 0 chr2 188107193 188107297 -65149286 + L1PB1 LINE L1 6041 6144 -7 24 0 0 0 chr2 188108328 188108352 -65148231 + AT_rich Low_complexity Low_complexity 1 24 0 503 246 148 44 chr2 188109036 188109239 -65147344 - MIR SINE MIR -3 259 36 201 358 46 37 chr2 188109291 188109400 -65147183 + L2 LINE L2 3149 3258 -14 196 321 71 12 chr2 188109889 188109973 -65146610 - L2 LINE L2 0 3313 3225 389 226 214 19 chr2 188110962 188111121 -65145462 + MER20 DNA MER1_type 25 214 -5 326 263 117 44 chr2 188111313 188111594 -65144989 + L1ME4a LINE L1 5583 5891 -230 2482 71 0 7 chr2 188111594 188111904 -65144679 + AluY SINE Alu 1 308 -3 326 263 117 44 chr2 188111904 188111938 -65144645 + L1ME4a LINE L1 5891 5921 -200 268 264 88 22 chr2 188112210 188112462 -65144121 + L1ME3A LINE L1 5503 5779 -342 227 371 34 11 chr2 188112866 188112955 -65143628 - L3 LINE CR1 -137 1440 1350 352 289 37 68 chr2 188114078 188114268 -65142315 - MIR SINE MIR -50 212 29 606 134 0 71 chr2 188115652 188115753 -65140830 + FLAM_A SINE Alu 1 95 -216 879 112 0 0 chr2 188115753 188115887 -65140696 + (GGA)n Simple_repeat Simple_repeat 3 136 0 581 262 45 19 chr2 188116169 188116378 -65140205 - L1M4 LINE L1 -845 5301 5080 2182 94 10 42 chr2 188116378 188116687 -65139896 + AluSg SINE Alu 1 299 -11 581 262 45 19 chr2 188116687 188116790 -65139793 - L1M4 LINE L1 -1066 5080 4981 226 304 29 0 chr2 188117387 188117456 -65139127 + L2 LINE L2 3242 3312 -1 2367 87 0 31 chr2 188117539 188117861 -65138722 + AluSx SINE Alu 1 312 0 312 233 56 0 chr2 188118526 188118616 -65137967 - MER112 DNA MER1_type -161 99 5 270 0 0 0 chr2 188121894 188121924 -65134659 + (TA)n Simple_repeat Simple_repeat 2 31 0 2240 82 0 14 chr2 188121927 188122221 -65134362 - AluY SINE Alu -21 290 1 904 304 62 30 chr2 188123894 188124296 -65132287 - L2 LINE L2 -4 3309 2895 188 122 24 0 chr2 188125711 188125752 -65130831 + (TA)n Simple_repeat Simple_repeat 2 43 0 865 165 55 0 chr2 188126581 188126745 -65129838 + MER20 DNA MER1_type 47 219 0 239 200 100 25 chr2 188127509 188127589 -65128994 + MIR3 SINE MIR 119 204 -4 396 0 0 0 chr2 188129245 188129289 -65127294 + (TAA)n Simple_repeat Simple_repeat 2 45 0 921 164 88 40 chr2 188129354 188129628 -65126955 - MER33 DNA MER1_type -36 288 2 950 178 68 0 chr2 188129769 188129960 -65126623 - L1PB4 LINE L1 -7 6149 5946 936 256 72 31 chr2 188130002 188130388 -65126195 + L1ME3A LINE L1 5757 6158 -12 27 0 0 0 chr2 188130531 188130558 -65126025 + AT_rich Low_complexity Low_complexity 1 27 0 4247 166 34 88 chr2 188131426 188132559 -65124024 + MER11C LTR ERVK 1 1071 0 799 236 116 25 chr2 188133205 188133489 -65123094 - LTR16A LTR ERVL -20 430 121 534 214 166 73 chr2 188136046 188136552 -65120031 - MLT1H1 LTR MaLR 0 555 1 230 336 131 30 chr2 188136636 188136972 -65119611 + L2 LINE L2 1755 2124 -1190 188 331 55 41 chr2 188137029 188137174 -65119409 + L2 LINE L2 2522 2668 -646 478 241 241 12 chr2 188139186 188139356 -65117227 + L2 LINE L2 1505 1713 -1601 1577 239 70 61 chr2 188139357 188140027 -65116556 + L1MC5 LINE L1 6741 7416 -545 861 186 156 80 chr2 188140027 188140366 -65116217 + MLT1A1 LTR MaLR 1 365 0 804 167 59 79 chr2 188140412 188140753 -65115830 + L1MC5 LINE L1 7452 7785 -176 615 206 0 0 chr2 188140758 188140865 -65115718 + FLAM_A SINE Alu 1 107 -35 2158 107 10 0 chr2 188140959 188141258 -65115325 + AluSx SINE Alu 6 307 -5 916 273 196 48 chr2 188141294 188141953 -65114630 + L2 LINE L2 1673 2460 -854 261 0 0 0 chr2 188141953 188141982 -65114601 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 916 273 196 48 chr2 188141982 188142078 -65114505 + L2 LINE L2 2460 2540 -774 931 249 92 48 chr2 188142086 188142444 -65114139 - MLT1A2 LTR MaLR 0 374 1 535 299 79 41 chr2 188142456 188142747 -65113836 + L2 LINE L2 2924 3225 -88 286 270 79 0 chr2 188142827 188142916 -65113667 + L2 LINE L2 3218 3313 0 6333 135 66 18 chr2 188143019 188144193 -65112390 - Tigger3b DNA MER2_type -1 1230 1 1796 161 111 11 chr2 188144308 188144668 -65111915 - MSTD LTR MaLR 0 396 1 2388 133 24 89 chr2 188144851 188145135 -65111448 - MSTA LTR MaLR 0 428 184 4411 75 0 42 chr2 188145135 188145762 -65110821 - L1PA8 LINE L1 -15 6157 5557 2388 133 24 89 chr2 188145762 188145935 -65110648 - MSTA LTR MaLR -244 184 1 6154 168 25 9 chr2 188145935 188147013 -65109570 - MSTA-int LTR MaLR 0 1651 557 4862 169 34 9 chr2 188146951 188148686 -65107897 - L1PA16 LINE L1 -259 5907 4125 * 207 69 0 0 chr2 188148734 188148763 -65107820 + (CA)n Simple_repeat Simple_repeat 2 30 0 245 298 123 49 chr2 188148798 188149311 -65107272 - L1MC/D LINE L1 -1901 5907 5357 256 306 71 0 chr2 188149480 188149578 -65107005 - L2 LINE L2 -9 3304 3200 2526 164 74 74 chr2 188150800 188151464 -65105119 - L1MA10 LINE L1 -13 6321 5658 1429 259 40 24 chr2 188151577 188152032 -65104551 + MLT1C LTR MaLR 6 467 0 422 230 119 24 chr2 188152281 188152407 -65104176 + MER5B DNA MER1_type 2 139 -39 3437 170 31 31 chr2 188152409 188153149 -65103434 + L1MB4 LINE L1 5441 6180 0 352 274 62 75 chr2 188155425 188155571 -65101012 - L2 LINE L2 0 3313 3170 1826 232 73 8 chr2 188155647 188156156 -65100427 + MLT1F LTR MaLR 1 542 0 210 374 10 20 chr2 188156605 188156704 -65099879 + L2 LINE L2 3169 3266 -6 1838 178 0 13 chr2 188157445 188157759 -65098824 - AluJo SINE Alu 0 312 3 21 57 0 0 chr2 188157821 188157856 -65098727 + AT_rich Low_complexity Low_complexity 1 35 0 186 43 0 0 chr2 188158720 188158743 -65097840 + (CCA)n Simple_repeat Simple_repeat 3 25 0 552 305 86 26 chr2 188158743 188158976 -65097607 - MIR SINE MIR -10 252 6 2505 73 13 50 chr2 188159020 188159402 -65097181 + L1PA11 LINE L1 5807 6174 0 231 295 82 41 chr2 188159544 188159666 -65096917 + L2 LINE L2 3179 3305 -8 512 289 83 15 chr2 188159737 188159941 -65096642 - MIR SINE MIR -44 218 1 27 0 0 0 chr2 188160476 188160503 -65096080 + AT_rich Low_complexity Low_complexity 1 27 0 2366 97 0 3 chr2 188161370 188161678 -65094905 + AluSq SINE Alu 1 307 -6 1290 95 0 6 chr2 188161678 188161847 -65094736 + AluSg/x SINE Alu 126 293 -19 368 301 44 18 chr2 188161848 188162074 -65094509 + L1ME4a LINE L1 5886 6117 -4 2714 87 0 6 chr2 188162337 188162703 -65093880 - THE1B LTR MaLR 0 364 1 915 190 82 5 chr2 188162764 188162959 -65093624 - MER63A DNA MER1_type 0 210 1 700 266 79 107 chr2 188162971 188163334 -65093249 + L1MEd LINE L1 275 647 -5472 3556 118 20 23 chr2 188163334 188163894 -65092689 - L1PA15 LINE L1 -3 6162 5605 700 266 79 107 chr2 188163894 188164391 -65092192 + L1MEd LINE L1 647 1111 -5008 1869 161 3 3 chr2 188165256 188165554 -65091029 - AluJb SINE Alu -14 298 1 1794 148 11 0 chr2 188165828 188166111 -65090472 + AluJb SINE Alu 1 286 -26 1065 267 93 19 chr2 188166165 188166800 -65089783 - L1ME3A LINE L1 -10 6955 6240 269 330 18 0 chr2 188166794 188166906 -65089677 - L1ME3A LINE L1 -2438 4503 4390 * 382 351 41 0 chr2 188166941 188167112 -65089471 - L1ME3A LINE L1 -2660 4281 4104 2407 241 107 15 chr2 188167115 188168270 -65088313 - L1MCc LINE L1 -2924 4017 2758 1826 197 42 14 chr2 188168270 188168630 -65087953 + MLT1A2 LTR MaLR 4 373 -1 2407 241 107 15 chr2 188168630 188168846 -65087737 - L1MCc LINE L1 -4183 2758 2563 993 309 72 29 chr2 188168885 188169813 -65086770 - L1MCc LINE L1 -4640 2482 1515 357 313 61 55 chr2 188169911 188170290 -65086293 - L1MCc LINE L1 -5231 1192 820 818 264 98 36 chr2 188170361 188170778 -65085805 - L1MCc LINE L1 -5955 468 26 2585 88 3 28 chr2 188171814 188171941 -65084642 - THE1A LTR MaLR 0 355 226 2208 130 0 0 chr2 188171941 188172242 -65084341 - AluSc SINE Alu -8 301 1 2585 88 3 28 chr2 188172242 188172478 -65084105 - THE1A LTR MaLR -129 226 1 11523 96 8 4 chr2 188172478 188174052 -65082531 - THE1A-int LTR MaLR 0 1580 1 2642 98 0 3 chr2 188174052 188174408 -65082175 - THE1A LTR MaLR 0 355 1 2060 113 36 3 chr2 188175170 188175472 -65081111 - AluSq SINE Alu -1 312 1 220 313 152 19 chr2 188175566 188175777 -65080806 - L3b LINE CR1 -95 1488 1250 443 233 157 100 chr2 188176028 188176328 -65080255 - MLT1H LTR MaLR 0 549 233 1349 228 159 41 chr2 188176788 188177253 -65079330 - L1ME3A LINE L1 -32 6138 5619 1645 138 8 0 chr2 188177253 188177493 -65079090 + AluSq SINE Alu 1 242 -71 246 62 0 0 chr2 188177495 188177527 -65079056 + (A)n Simple_repeat Simple_repeat 1 32 0 225 306 0 0 chr2 188177527 188177589 -65078994 - L1ME3A LINE L1 -538 5632 5571 217 188 141 62 chr2 188178001 188178065 -65078518 - L2 LINE L2 -3 3310 3242 730 299 73 34 chr2 188179020 188179431 -65077152 - MLT1K LTR MaLR 0 588 162 797 173 0 0 chr2 188179826 188179953 -65076630 + FLAM_A SINE Alu 1 127 -6 1229 139 23 14 chr2 188179982 188180197 -65076386 + L1MC1 LINE L1 6115 6331 -2 760 251 52 14 chr2 188180638 188180849 -65075734 + MER20 DNA MER1_type 1 219 0 647 180 0 90 chr2 188180944 188181122 -65075461 - L1P LINE L1 -1082 5064 4903 * 4867 130 67 12 chr2 188181120 188182053 -65074530 + L1PA16 LINE L1 5172 6155 -11 2077 123 0 0 chr2 188182053 188182361 -65074222 + AluSg SINE Alu 1 308 0 190 403 137 0 chr2 188182488 188182612 -65073971 - L2 LINE L2 -250 3022 2882 289 281 62 47 chr2 188183078 188183206 -65073377 + L2 LINE L2 3168 3297 -16 529 278 164 8 chr2 188183691 188183954 -65072629 + MER102b DNA MER1_type 38 341 0 284 281 86 16 chr2 188184064 188184192 -65072391 - MIR SINE MIR -85 177 41 422 314 66 7 chr2 188185400 188185605 -65070978 - MIR SINE MIR -19 243 24 367 328 122 14 chr2 188185787 188186074 -65070509 - L2 LINE L2 -2273 1041 724 950 263 89 41 chr2 188186464 188186833 -65069750 + L2 LINE L2 2911 3297 -16 1957 83 8 0 chr2 188189094 188189348 -65067235 - AluSq SINE Alu -14 299 44 1577 178 3 23 chr2 188189370 188189673 -65066910 + AluJb SINE Alu 1 297 -15 198 167 0 0 chr2 188189673 188189709 -65066874 + G-rich Low_complexity Low_complexity 2 37 0 983 163 11 11 chr2 188191437 188191621 -65064962 + L1PA16 LINE L1 5736 5919 -247 2935 224 101 16 chr2 188191721 188192594 -65063989 + L1MC4a LINE L1 6861 7807 -1 2450 243 74 24 chr2 188192806 188193663 -65062920 + L1ME3A LINE L1 5211 6108 -62 30 45 0 0 chr2 188193710 188193754 -65062829 + AT_rich Low_complexity Low_complexity 1 44 0 224 221 0 15 chr2 188194747 188194815 -65061768 + (TA)n Simple_repeat Simple_repeat 2 68 0 193 367 133 21 chr2 188195041 188195281 -65061302 - L2 LINE L2 -195 3077 2811 22 70 0 0 chr2 188196156 188196199 -65060384 + AT_rich Low_complexity Low_complexity 1 43 0 226 406 42 14 chr2 188197022 188197165 -65059418 + L2 LINE L2 3117 3263 -9 30 27 0 0 chr2 188199678 188199715 -65056868 + AT_rich Low_complexity Low_complexity 1 37 0 1002 162 5 56 chr2 188199824 188200040 -65056543 - MER3 DNA MER1_type -4 205 1 183 42 0 0 chr2 188200137 188200161 -65056422 + (TA)n Simple_repeat Simple_repeat 1 24 0 22 35 0 0 chr2 188200506 188200535 -65056048 + AT_rich Low_complexity Low_complexity 1 29 0 989 217 61 5 chr2 188200928 188201140 -65055443 - MER58A DNA MER1_type 0 224 1 211 260 0 0 chr2 188201546 188201596 -65054987 + L2 LINE L2 3264 3313 0 2169 122 0 0 chr2 188201605 188201908 -65054675 + AluSx SINE Alu 3 305 -7 1402 114 50 5 chr2 188202003 188202223 -65054360 - MER30 DNA MER1_type 0 230 1 1384 171 113 13 chr2 188202800 188203056 -65053527 + L1MB7 LINE L1 5825 6119 -65 1982 153 14 11 chr2 188203056 188203403 -65053180 - MER7A DNA MER2_type 0 346 1 1384 171 113 13 chr2 188203403 188203456 -65053127 + L1MB7 LINE L1 6119 6165 -19 265 252 156 52 chr2 188204143 188204278 -65052305 - MIR3 SINE MIR -12 196 48 23 33 0 0 chr2 188205355 188205385 -65051198 + AT_rich Low_complexity Low_complexity 1 30 0 713 113 121 0 chr2 188206352 188206493 -65050090 + L1MA6 LINE L1 6143 6300 0 26 50 0 0 chr2 188206499 188206539 -65050044 + AT_rich Low_complexity Low_complexity 1 40 0 2767 10 0 0 chr2 188206889 188207195 -65049388 - AluY SINE Alu -5 306 1 22 70 0 0 chr2 188207739 188207782 -65048801 + AT_rich Low_complexity Low_complexity 1 43 0 578 225 0 42 chr2 188209202 188209344 -65047239 - MER20 DNA MER1_type -4 215 80 270 143 0 0 chr2 188209431 188209480 -65047103 + (TTC)n Simple_repeat Simple_repeat 1 49 0 5097 178 88 54 chr2 188210935 188212119 -65044464 + Charlie1a DNA MER1_type 2 1243 -1518 2193 101 0 7 chr2 188212119 188212416 -65044167 - AluSg SINE Alu -15 295 1 5097 178 88 54 chr2 188212416 188212636 -65043947 + Charlie1a DNA MER1_type 1243 1454 -1 217 299 78 0 chr2 188213486 188213563 -65043020 - MIR SINE MIR -157 105 23 22 0 0 0 chr2 188214024 188214046 -65042537 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr2 188214675 188214706 -65041877 + AT_rich Low_complexity Low_complexity 1 31 0 26 48 0 32 chr2 188216253 188216276 -65040307 + AT_rich Low_complexity Low_complexity 1 23 -37 2412 75 0 7 chr2 188216276 188216581 -65040002 + AluY SINE Alu 1 303 -8 26 48 0 32 chr2 188216581 188216619 -65039964 + AT_rich Low_complexity Low_complexity 23 60 0 1609 137 40 22 chr2 188218320 188218597 -65037986 - AluJb SINE Alu -30 282 1 6780 152 39 18 chr2 188218849 188220423 -65036160 + L1MA8 LINE L1 3996 5628 -663 1486 206 7 7 chr2 188220423 188220729 -65035854 + AluJo SINE Alu 1 306 -6 6780 152 39 18 chr2 188220729 188221408 -65035175 + L1MA8 LINE L1 5628 6291 0 201 216 273 34 chr2 188222515 188222603 -65033980 + MIR3 SINE MIR 88 196 -12 758 230 79 58 chr2 188222643 188223088 -65033495 - Charlie4a DNA MER1_type 0 508 1 770 211 16 54 chr2 188223132 188223317 -65033266 - MER97c DNA MER1_type? -911 179 2 1759 87 0 0 chr2 188223963 188224193 -65032390 - AluSg/x SINE Alu -7 305 76 984 247 14 9 chr2 188224695 188224918 -65031665 + MER58A DNA MER1_type 1 224 0 206 222 0 0 chr2 188225507 188225552 -65031031 + (TCTCTG)n Simple_repeat Simple_repeat 6 50 0 267 360 41 14 chr2 188225932 188226079 -65030504 - L2 LINE L2 -525 2789 2639 3764 96 5 20 chr2 188226652 188227204 -65029379 - L1PA13 LINE L1 -5 6158 5615 454 297 72 54 chr2 188227705 188227927 -65028656 + MIR SINE MIR 17 242 -20 443 307 105 22 chr2 188228514 188228742 -65027841 - MIR SINE MIR -12 250 4 2192 115 6 18 chr2 188229120 188229459 -65027124 + MER44D DNA MER2_type 1 605 -4 1656 137 98 29 chr2 188230945 188231260 -65025323 - MER1B DNA MER1_type 0 337 1 186 174 0 0 chr2 188231945 188231991 -65024592 + T-rich Low_complexity Low_complexity 1 46 0 1277 93 0 51 chr2 188231992 188232206 -65024377 - L1PB1 LINE L1 -1 6150 5948 801 112 0 0 chr2 188232318 188232446 -65024137 - AluJb SINE Alu 0 307 180 281 228 35 0 chr2 188232561 188232618 -65023965 - L2 LINE L2 -9 3263 3205 24 32 0 0 chr2 188232856 188232887 -65023696 + AT_rich Low_complexity Low_complexity 1 31 0 372 125 23 11 chr2 188233591 188233679 -65022904 + GA-rich Low_complexity Low_complexity 1 89 0 271 254 14 28 chr2 188233742 188233813 -65022770 - MER113 DNA MER1_type? -135 386 317 180 265 0 0 chr2 188234797 188234846 -65021737 + L2 LINE L2 3246 3294 -19 421 324 123 5 chr2 188234865 188235084 -65021499 + L3 LINE CR1 1324 1568 -9 789 252 74 79 chr2 188235377 188235795 -65020788 + L2 LINE L2 2814 3276 -37 240 111 0 0 chr2 188236072 188236108 -65020475 + (CA)n Simple_repeat Simple_repeat 2 37 0 445 42 141 14 chr2 188236198 188236269 -65020314 - MADE1 DNA Mariner 0 80 1 238 316 40 0 chr2 188237391 188237467 -65019116 - MIR3 SINE MIR -17 191 113 29 0 0 0 chr2 188237478 188237507 -65019076 + AT_rich Low_complexity Low_complexity 1 29 0 2002 72 0 8 chr2 188237934 188238185 -65018398 + AluY SINE Alu 32 304 0 184 42 0 0 chr2 188238185 188238209 -65018374 + (CAAA)n Simple_repeat Simple_repeat 1 180 0 2742 214 100 16 chr2 188238659 188239509 -65017074 + L1ME LINE L1 139 1059 -5146 388 186 0 20 chr2 188239518 188239620 -65016963 + L1ME LINE L1 1429 1528 -4868 * 470 238 25 0 chr2 188239617 188239739 -65016844 + L1MA4 LINE L1 5893 6017 -283 320 198 0 12 chr2 188239752 188239838 -65016745 + L1MB3 LINE L1 6092 6176 -7 874 260 71 61 chr2 188239856 188240459 -65016124 + L1ME LINE L1 1537 2145 -4251 359 285 40 40 chr2 188240763 188240914 -65015669 - L2 LINE L2 0 3313 3163 188 214 10 133 chr2 188241071 188241169 -65015414 + MER5A DNA MER1_type 75 160 -29 443 276 70 35 chr2 188241401 188241600 -65014983 - MIR SINE MIR -28 234 29 228 35 0 0 chr2 188242877 188242906 -65013677 + (CAAAAA)n Simple_repeat Simple_repeat 3 31 0 781 251 129 13 chr2 188243353 188243656 -65012927 + MER46C DNA MER2_type 1 338 0 193 265 41 0 chr2 188244107 188244156 -65012427 + L2 LINE L2 3182 3232 -81 452 294 105 85 chr2 188244297 188244389 -65012194 + L2 LINE L2 1707 1796 -1518 2159 123 7 13 chr2 188244389 188244698 -65011885 - AluSx SINE Alu -5 307 1 452 294 105 85 chr2 188244698 188245274 -65011309 + L2 LINE L2 1796 2388 -926 245 180 0 0 chr2 188245498 188245548 -65011035 + Alu SINE Alu 84 133 0 337 325 49 8 chr2 188245776 188245899 -65010684 - L2 LINE L2 -235 3037 2910 247 278 0 0 chr2 188246007 188246061 -65010522 + L2 LINE L2 3229 3282 -31 1961 123 33 13 chr2 188247450 188247751 -65008832 - AluSx SINE Alu -1 311 5 503 256 56 8 chr2 188248114 188248239 -65008344 - MER5A DNA MER1_type -55 134 4 2292 57 4 0 chr2 188248365 188248680 -65007903 + AluY SINE Alu 1 316 0 433 262 26 50 chr2 188248796 188248990 -65007593 - MIR SINE MIR -41 221 28 283 401 27 14 chr2 188249433 188249655 -65006928 - L2 LINE L2 -1038 2276 2052 547 339 41 9 chr2 188251081 188251302 -65005281 + MIR SINE MIR 8 235 -27 2807 80 23 9 chr2 188251440 188251846 -65004737 + MLT2A1 LTR ERVL 2 475 -40 211 219 24 24 chr2 188251848 188251930 -65004653 + (TA)n Simple_repeat Simple_repeat 2 83 0 459 0 0 0 chr2 188251941 188251992 -65004591 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 300 95 0 0 chr2 188251992 188252034 -65004549 + MLT2A2 LTR ERVL 412 453 0 328 325 6 17 chr2 188252260 188252438 -65004145 - LTR16A LTR ERVL -315 149 1 309 341 22 17 chr2 188252731 188252910 -65003673 - HERV16 LTR ERVL -503 5151 4972 3065 322 50 51 chr2 188253178 188254412 -65002171 - HERV16 LTR ERVL -1063 4701 3467 335 64 0 0 chr2 188254412 188254459 -65002124 - Alu SINE Alu -8 293 247 3065 322 50 51 chr2 188254459 188256801 -64999782 - HERV16 LTR ERVL -2297 3467 944 346 363 0 24 chr2 188256809 188256977 -64999606 - HERV16 LTR ERVL -4830 166 3 312 306 31 59 chr2 188256978 188257200 -64999383 - LTR16B LTR ERVL 0 464 249 2233 162 16 69 chr2 188257205 188257655 -64998928 + MSTB LTR MaLR 1 426 0 309 272 22 36 chr2 188258619 188258816 -64997767 + MER31-int LTR ERV1 3677 3841 -1095 1270 232 150 22 chr2 188260350 188260539 -64996044 - MLT1F1 LTR MaLR 0 567 403 1688 198 31 11 chr2 188260539 188260897 -64995686 + MLT1A1 LTR MaLR 1 365 0 1270 232 150 22 chr2 188260897 188261168 -64995415 - MLT1F1 LTR MaLR -164 403 48 301 280 0 0 chr2 188261169 188261244 -64995339 - MER2 DNA MER2_type -1 344 270 447 188 0 0 chr2 188261281 188261350 -64995233 + AluS SINE Alu 5 73 -240 2093 167 123 40 chr2 188261352 188262041 -64994542 - SATR1 Satellite Satellite -1 745 1 1230 196 270 4 chr2 188262064 188263373 -64993210 - SATR1 Satellite Satellite -1 1656 1 980 206 217 36 chr2 188263396 188263878 -64992705 - SATR1 Satellite Satellite -150 569 1 910 237 179 54 chr2 188263889 188264298 -64992285 - SATR1 Satellite Satellite -2 468 9 476 138 65 138 chr2 188264336 188264474 -64992109 - SATR1 Satellite Satellite -137 333 206 461 275 109 49 chr2 188264678 188264925 -64991658 + MIR SINE MIR 1 262 0 567 182 146 18 chr2 188266656 188266821 -64989762 + MER53 DNA DNA 4 189 0 1440 241 41 41 chr2 188267695 188268200 -64988383 - MER21B LTR ERV1 -13 592 61 336 258 79 83 chr2 188268238 188268490 -64988093 + HAL1b LINE L1 340 590 -758 875 196 107 103 chr2 188268745 188268978 -64987605 - L1MC4 LINE L1 -1 8041 7804 2156 133 125 8 chr2 188268978 188269361 -64987222 - MSTA LTR MaLR 0 428 1 875 196 107 103 chr2 188269361 188269556 -64987027 - L1MC4 LINE L1 -238 7804 7611 1090 140 16 0 chr2 188269564 188269757 -64986826 - L1MA2 LINE L1 -6 6298 6103 239 252 114 57 chr2 188269856 188269979 -64986604 - L1MC4 LINE L1 -1 8041 7912 25 31 0 0 chr2 188270064 188270096 -64986487 + AT_rich Low_complexity Low_complexity 1 32 0 16812 168 45 37 chr2 188270096 188275408 -64981175 - L1MA2 LINE L1 -178 7545 2071 375 165 0 63 chr2 188275408 188275487 -64981096 - AluJb SINE Alu -168 134 61 16812 168 45 37 chr2 188275487 188277558 -64979025 - L1MA2 LINE L1 -5652 2071 20 1032 172 13 47 chr2 188277561 188277794 -64978789 - L1MC4 LINE L1 -420 7622 7398 21 0 0 0 chr2 188277806 188277827 -64978756 + AT_rich Low_complexity Low_complexity 1 21 0 190 254 0 84 chr2 188277863 188277934 -64978649 - MER5C DNA MER1_type -229 95 31 360 319 92 27 chr2 188278046 188278341 -64978242 + MLT1K LTR MaLR 117 430 -158 671 213 43 7 chr2 188278642 188278810 -64977773 + FRAM SINE Alu 1 173 0 3941 198 30 8 chr2 188278826 188280153 -64976430 + L1MB2 LINE L1 4790 6144 -27 360 279 14 51 chr2 188281277 188281431 -64975152 - MIR SINE MIR -67 141 27 5053 207 31 4 chr2 188282208 188284250 -64972333 - L1MB8 LINE L1 -9 6169 4068 279 200 46 0 chr2 188284255 188284320 -64972263 + MER21B LTR ERV1 1 68 -795 442 183 0 0 chr2 188284353 188284424 -64972159 + MER21B LTR ERV1 19 89 -774 1018 217 62 91 chr2 188284426 188284831 -64971752 + MSTD LTR MaLR 1 393 -3 907 273 24 16 chr2 188284836 188285085 -64971498 + MER21B LTR ERV1 43 293 -570 1486 212 62 71 chr2 188285185 188285730 -64970853 + MER21B LTR ERV1 271 861 -2 4465 242 41 18 chr2 188285737 188287097 -64969486 - L1MB8 LINE L1 -2071 4075 2673 2486 71 0 0 chr2 188287097 188287406 -64969177 + AluY SINE Alu 1 309 -2 4465 242 41 18 chr2 188287406 188287593 -64968990 - L1MB8 LINE L1 -3473 2673 2492 185 226 0 75 chr2 188287714 188287767 -64968816 - MER5C DNA MER1_type -179 145 97 22 56 0 0 chr2 188289667 188289703 -64966880 + AT_rich Low_complexity Low_complexity 1 36 0 213 225 0 0 chr2 188289789 188289829 -64966754 + A-rich Low_complexity Low_complexity 2 41 0 468 152 13 0 chr2 188289907 188289986 -64966597 - MADE1 DNA Mariner 0 80 1 3667 186 3 40 chr2 188290061 188290931 -64965652 + L1 LINE L1 4161 4998 -1148 474 155 0 0 chr2 188290937 188291008 -64965575 + Tigger4(Zombi) DNA MER2_type 2 72 -2659 1140 157 132 30 chr2 188291010 188291245 -64965338 + Tigger4(Zombi) DNA MER2_type 184 442 -2289 600 128 0 0 chr2 188291243 188291329 -64965254 + Tigger4(Zombi) DNA MER2_type 2646 2731 0 * 774 266 57 29 chr2 188291329 188291573 -64965010 - MIR SINE MIR -2 260 10 300 91 0 0 chr2 188292409 188292453 -64964130 + (CA)n Simple_repeat Simple_repeat 2 45 0 751 159 0 24 chr2 188294027 188294153 -64962430 - FLAM_A SINE Alu -7 126 4 1366 129 18 86 chr2 188294879 188295158 -64961425 + L1MA5A LINE L1 5613 5872 -440 13383 84 8 9 chr2 188295158 188297804 -64958779 + L1PA7 LINE L1 3503 6148 -6 387 139 35 47 chr2 188297818 188297904 -64958679 + L1MA9 LINE L1 6093 6177 -135 1491 106 70 0 chr2 188297904 188298160 -64958423 + L1MA5A LINE L1 6019 6292 -5 719 122 6 85 chr2 188298160 188298320 -64958263 + L1MA9 LINE L1 6162 6312 0 284 43 21 43 chr2 188299189 188299236 -64957347 + LTR14B LTR ERVK 1 46 -562 * 1615 138 92 74 chr2 188299224 188299615 -64956968 + LTR14B LTR ERVK 211 608 0 4737 96 77 1 chr2 188299615 188300345 -64956238 + HERVK14 LTR ERVK 1 785 -5160 7281 90 64 15 chr2 188300387 188301507 -64955076 + HERV17 LTR ERV1 835 2009 -6617 * 9259 72 35 16 chr2 188301497 188302798 -64953785 + HERV17 LTR ERV1 2430 3754 -4872 1204 47 0 0 chr2 188302777 188302925 -64953658 + HERV17 LTR ERV1 5405 5552 -3074 * 350 42 0 0 chr2 188302926 188302974 -64953609 + HERV17 LTR ERV1 434 481 -8145 2952 71 74 35 chr2 188302974 188303605 -64952978 + HERVK14 LTR ERVK 5038 5759 -186 286 270 0 0 chr2 188303605 188303668 -64952915 + MER41C LTR ERV1 1 63 -491 380 115 207 23 chr2 188303670 188303757 -64952826 + HERVK14 LTR ERVK 5830 5932 -13 1852 117 68 86 chr2 188303767 188304169 -64952414 + LTR14B LTR ERVK 2 608 0 840 255 81 12 chr2 188306117 188306364 -64950219 + L1MEc LINE L1 36 299 -6097 356 322 90 6 chr2 188307348 188307525 -64949058 + MIR3 SINE MIR 6 197 -11 246 231 28 93 chr2 188307802 188307910 -64948673 - MLT1H LTR MaLR -129 426 326 1241 227 71 24 chr2 188307943 188308282 -64948301 + MLT1A1 LTR MaLR 11 365 0 652 296 67 25 chr2 188308282 188308563 -64948020 - MLT1H LTR MaLR -234 321 17 * 908 273 130 26 chr2 188308553 188308861 -64947722 - MLT2E LTR ERVL -288 340 1 345 362 26 13 chr2 188309173 188309325 -64947258 + Zaphod DNA AcHobo 23 176 -3855 667 170 53 158 chr2 188309326 188309573 -64947010 - MSTB1 LTR MaLR 0 432 212 2032 139 26 15 chr2 188309899 188310238 -64946345 - THE1B LTR MaLR 0 364 22 660 153 137 0 chr2 188310262 188310386 -64946197 - MSTB1 LTR MaLR -316 141 1 1041 251 109 19 chr2 188310466 188310825 -64945758 + Zaphod DNA AcHobo 276 666 -3365 * 1350 191 141 40 chr2 188310822 188311341 -64945242 + Zaphod DNA AcHobo 3296 3866 -165 470 283 7 0 chr2 188311473 188311618 -64944965 + MER115 DNA AcHobo 546 691 -2 187 91 121 0 chr2 188311946 188311979 -64944604 - L2 LINE L2 -4 3268 3232 593 192 46 53 chr2 188312299 188312450 -64944133 - L2 LINE L2 -2 3311 3162 234 302 151 14 chr2 188312485 188312624 -64943959 - MER68 LTR ERV1 -40 522 365 978 218 39 100 chr2 188312662 188313052 -64943531 - MER68 LTR ERV1 -196 366 1 399 265 28 66 chr2 188313085 188313266 -64943317 - L2 LINE L2 -193 3120 2947 5186 168 67 15 chr2 188316239 188318267 -64938316 + L1PA16 LINE L1 4040 6166 0 2125 126 3 0 chr2 188318343 188318653 -64937930 - AluSx SINE Alu -1 311 1 344 250 318 0 chr2 188319277 188319469 -64937114 + MIR SINE MIR 3 255 -7 30 0 0 0 chr2 188320408 188320438 -64936145 + AT_rich Low_complexity Low_complexity 1 30 0 391 292 97 27 chr2 188320445 188320749 -64935834 - L1MC/D LINE L1 -743 5403 5152 246 277 97 20 chr2 188321028 188321223 -64935360 - L1MC/D LINE L1 -1438 4708 4499 427 269 184 25 chr2 188321365 188321647 -64934936 - L1MC/D LINE L1 -1720 4426 4100 1780 113 0 8 chr2 188321680 188321928 -64934655 + AluSx SINE Alu 49 294 -18 1431 183 11 29 chr2 188321980 188322259 -64934324 - AluJo SINE Alu -23 289 16 274 284 123 38 chr2 188322286 188322578 -64934005 - L1MC/D LINE L1 -2213 3933 3617 227 204 0 20 chr2 188323088 188323137 -64933446 - L1MC/D LINE L1 -3155 2991 2944 323 272 8 0 chr2 188323145 188323270 -64933313 + CT-rich Low_complexity Low_complexity 3 128 0 1142 272 98 3 chr2 188323276 188323592 -64932991 - LTR16A LTR ERVL -44 406 61 299 291 63 21 chr2 188323745 188323934 -64932649 - HAL1 LINE L1 -870 1637 1441 23 0 0 0 chr2 188323969 188323992 -64932591 + AT_rich Low_complexity Low_complexity 1 23 0 5584 109 21 26 chr2 188324168 188325984 -64930599 - L1PA14 LINE L1 0 6161 4336 373 253 267 0 chr2 188326182 188326400 -64930183 - MLT1G LTR MaLR -34 556 289 2394 73 0 10 chr2 188326743 188327043 -64929540 + AluY SINE Alu 2 298 -13 260 268 140 45 chr2 188327526 188327705 -64928878 + MIR SINE MIR 64 259 -3 208 295 0 0 chr2 188328125 188328203 -64928380 + (TA)n Simple_repeat Simple_repeat 2 79 0 798 188 150 0 chr2 188330002 188330215 -64926368 - L1ME LINE L1 -602 5562 5318 958 253 134 28 chr2 188330229 188330728 -64925855 - L1ME LINE L1 -892 5254 4703 244 200 214 0 chr2 188330738 188330808 -64925775 - L1MC/D LINE L1 -3400 2746 2662 579 198 8 0 chr2 188330901 188331022 -64925561 - L1ME LINE L1 -676 5488 5367 23 0 0 0 chr2 188332030 188332053 -64924530 + AT_rich Low_complexity Low_complexity 1 23 0 1906 176 42 21 chr2 188332561 188332867 -64923716 - MLT1B LTR MaLR 0 390 73 5960 140 93 8 chr2 188332867 188334001 -64922582 + Tigger3b DNA MER2_type 1 1231 0 1906 176 42 21 chr2 188334001 188334074 -64922509 - MLT1B LTR MaLR -317 73 3 268 261 72 0 chr2 188335072 188335141 -64921442 - MER2 DNA MER2_type -1 344 271 1338 175 44 46 chr2 188335805 188336133 -64920450 - MLT1A1 LTR MaLR 0 365 20 1080 242 124 20 chr2 188336138 188336629 -64919954 - L1ME3A LINE L1 -97 6142 5453 5575 119 49 4 chr2 188336630 188337595 -64918988 - L1PA15 LINE L1 -6 6159 5153 10801 198 66 20 chr2 188337598 188340283 -64916300 + L1PA15 LINE L1 2329 5137 -1009 3168 243 101 76 chr2 188340276 188341171 -64915412 - L1ME3A LINE L1 -747 5468 4597 * 2190 93 0 10 chr2 188341171 188341472 -64915111 - AluY SINE Alu -13 298 1 3168 243 101 76 chr2 188341472 188342079 -64914504 - L1ME3A LINE L1 -1618 4597 4007 5909 109 23 7 chr2 188342079 188343389 -64913194 - L1PA14 LINE L1 0 6161 4836 3168 243 101 76 chr2 188343389 188343473 -64913110 - L1ME3A LINE L1 -2208 4007 3927 2081 82 7 4 chr2 188343473 188343754 -64912829 - AluY SINE Alu -29 282 1 3168 243 101 76 chr2 188343754 188344667 -64911916 - L1ME3A LINE L1 -2288 3927 2905 8886 115 62 22 chr2 188344675 188346149 -64910434 + Tigger4(Zombi) DNA MER2_type 1200 2731 0 2218 110 0 3 chr2 188346184 188346476 -64910107 - AluSq SINE Alu -22 291 1 556 259 138 12 chr2 188346481 188346897 -64909686 - L1MEc LINE L1 -3655 2560 2145 2132 132 0 3 chr2 188346936 188347246 -64909337 - AluSq SINE Alu -4 309 1 21 57 0 0 chr2 188347771 188347806 -64908777 + AT_rich Low_complexity Low_complexity 1 35 0 666 322 105 30 chr2 188348099 188348633 -64907950 - L2 LINE L2 -123 3190 2625 403 287 52 15 chr2 188348637 188348773 -64907810 + HAL1 LINE L1 5 145 -2362 544 270 146 22 chr2 188348789 188349015 -64907568 + HAL1 LINE L1 433 686 -1821 328 295 71 82 chr2 188349606 188349986 -64906597 - MLT1I LTR MaLR 0 409 34 557 179 0 97 chr2 188350064 188350198 -64906385 - FLAM_A SINE Alu -12 121 1 309 247 169 26 chr2 188350199 188350353 -64906230 + HAL1 LINE L1 996 1171 -1336 936 251 65 41 chr2 188350358 188350772 -64905811 + HAL1 LINE L1 1583 2006 -501 747 300 43 12 chr2 188352370 188352623 -64903960 + MIR SINE MIR 2 262 0 467 253 83 94 chr2 188352882 188353147 -64903436 - MIR SINE MIR 0 262 1 192 271 17 34 chr2 188353372 188353431 -64903152 + MIR SINE MIR 202 259 -3 794 299 48 8 chr2 188354162 188354413 -64902170 + MIR SINE MIR 2 262 0 350 304 106 44 chr2 188356094 188356321 -64900262 + MLT1K LTR MaLR 148 388 -200 314 295 139 0 chr2 188357463 188357592 -64898991 - MLT1H LTR MaLR -7 542 396 265 196 87 43 chr2 188358036 188358128 -64898455 + MLT1H-int LTR MaLR 1252 1347 -24 1732 257 73 17 chr2 188358150 188358668 -64897915 + MLT1H LTR MaLR 1 547 -2 926 252 119 72 chr2 188359471 188359915 -64896668 - MLT1F1 LTR MaLR -67 500 11 258 166 199 87 chr2 188360328 188360569 -64896014 - HAL1 LINE L1 -1191 1316 1049 22 56 0 0 chr2 188361084 188361120 -64895463 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr2 188361244 188361265 -64895318 + AT_rich Low_complexity Low_complexity 1 21 0 550 211 27 81 chr2 188362794 188362979 -64893604 + MER5B DNA MER1_type 4 178 0 2409 221 81 68 chr2 188363200 188363981 -64892602 - MER21B LTR ERV1 -60 803 13 791 241 72 40 chr2 188364167 188364416 -64892167 + LTR16A1 LTR ERVL 201 457 0 29 0 0 0 chr2 188364649 188364678 -64891905 + AT_rich Low_complexity Low_complexity 1 29 0 238 340 92 0 chr2 188365283 188365436 -64891147 + LTR33A LTR ERVL 140 306 -217 776 217 67 17 chr2 188368065 188368245 -64888338 + MER5A DNA MER1_type 1 189 0 1877 133 7 20 chr2 188368365 188368665 -64887918 + AluJb SINE Alu 2 297 -15 189 0 0 0 chr2 188368846 188368867 -64887716 + (T)n Simple_repeat Simple_repeat 1 21 0 582 247 19 7 chr2 188369255 188369409 -64887174 + MER5B DNA MER1_type 20 175 -3 203 294 0 0 chr2 188369589 188369640 -64886943 + C-rich Low_complexity Low_complexity 3 53 0 1003 187 29 50 chr2 188370997 188371065 -64885518 - MER46A DNA MER2_type -2495 236 168 14981 131 21 6 chr2 188371065 188373444 -64883139 - Tigger1 DNA MER2_type 0 2418 4 1003 187 29 50 chr2 188373444 188373616 -64882967 - MER46A DNA MER2_type -2563 168 1 228 326 121 28 chr2 188374555 188374696 -64881887 - L3b LINE CR1 -146 1437 1284 589 240 18 18 chr2 188374730 188374901 -64881682 + MER104 DNA Tc2 8 178 -2 651 236 71 16 chr2 188375781 188375963 -64880620 - L2 LINE L2 -27 3286 3095 938 246 77 94 chr2 188375990 188376534 -64880049 - MER34B LTR ERV1 -5 537 3 285 209 70 23 chr2 188376739 188376825 -64879758 - L2 LINE L2 -535 2779 2690 202 200 11 167 chr2 188377020 188377110 -64879473 + L2 LINE L2 3199 3274 -39 225 299 110 55 chr2 188378274 188378401 -64878182 + L2 LINE L2 3137 3270 -2 213 320 87 19 chr2 188378454 188378557 -64878026 + L2 LINE L2 3156 3265 -7 1454 160 0 4 chr2 188378584 188378815 -64877768 - AluJb SINE Alu -82 230 1 24 0 0 0 chr2 188379821 188379845 -64876738 + AT_rich Low_complexity Low_complexity 1 24 0 2256 112 7 0 chr2 188380693 188380997 -64875586 + AluSq SINE Alu 1 306 -7 314 121 0 17 chr2 188381698 188381756 -64874827 + (TG)n Simple_repeat Simple_repeat 2 58 0 1495 122 0 0 chr2 188382432 188382661 -64873922 - L1P5 LINE L1 -331 5820 5592 4612 138 67 39 chr2 188383035 188384074 -64872509 - L1PB2 LINE L1 -1 6150 5072 432 215 0 0 chr2 188384085 188384178 -64872405 - L1PB2 LINE L1 -1187 4959 4867 206 314 0 0 chr2 188384305 188384356 -64872227 + (TTCA)n Simple_repeat Simple_repeat 1 51 0 744 296 45 62 chr2 188384611 188385013 -64871570 - MLT1J LTR MaLR -114 397 3 197 372 0 23 chr2 188385039 188385125 -64871458 - L2 LINE L2 -252 3020 2937 763 138 0 0 chr2 188385889 188386005 -64870578 - L1PA6 LINE L1 -89 6065 5950 568 79 0 0 chr2 188386005 188386081 -64870502 + L1PA5 LINE L1 6066 6141 -13 21 0 0 0 chr2 188386877 188386898 -64869685 + AT_rich Low_complexity Low_complexity 1 21 0 424 286 56 19 chr2 188387775 188387936 -64868647 - MER5A DNA MER1_type -22 167 1 24 0 0 0 chr2 188388141 188388165 -64868418 + AT_rich Low_complexity Low_complexity 1 24 0 360 247 139 22 chr2 188388909 188389132 -64867451 - L1ME LINE L1 -661 5509 5261 22 70 0 0 chr2 188389446 188389489 -64867094 + AT_rich Low_complexity Low_complexity 1 43 0 208 310 147 26 chr2 188389554 188389670 -64866913 + MER5A DNA MER1_type 2 131 -58 551 323 52 0 chr2 188390530 188390685 -64865898 - MIR3 SINE MIR -6 202 40 900 191 32 32 chr2 188390862 188391050 -64865533 - L1MD1 LINE L1 -16 6226 6039 208 259 0 0 chr2 188391356 188391410 -64865173 + A-rich Low_complexity Low_complexity 1 54 0 2346 52 3 29 chr2 188391453 188391761 -64864822 + AluY SINE Alu 1 300 -11 213 225 0 0 chr2 188392967 188393007 -64863576 + (TATATG)n Simple_repeat Simple_repeat 5 44 0 191 188 21 0 chr2 188393118 188393166 -64863417 + (TA)n Simple_repeat Simple_repeat 2 50 0 3963 122 11 19 chr2 188396436 188397082 -64859501 - L1PA14 LINE L1 -3 6158 5518 187 207 121 17 chr2 188397348 188397406 -64859177 - MIR3 SINE MIR -22 186 123 286 266 0 0 chr2 188398643 188398707 -64857876 - MIR SINE MIR -3 259 196 2232 65 7 0 chr2 188399092 188399398 -64857185 - AluY SINE Alu 0 309 2 21 0 0 0 chr2 188400032 188400053 -64856530 + AT_rich Low_complexity Low_complexity 1 21 0 202 282 28 42 chr2 188402084 188402155 -64854428 + MIR SINE MIR 79 148 -114 1236 219 52 43 chr2 188403337 188403666 -64852917 + MLT2D LTR ERVL 83 414 0 785 76 68 0 chr2 188404184 188404302 -64852281 + L1PA5 LINE L1 6022 6147 -7 235 309 0 24 chr2 188404313 188404397 -64852186 + GA-rich Low_complexity Low_complexity 3 84 0 33 43 0 0 chr2 188404654 188404701 -64851882 + AT_rich Low_complexity Low_complexity 1 47 0 597 327 27 35 chr2 188405295 188405552 -64851031 - MER21-int LTR ERV1 -1038 3153 2899 916 217 71 0 chr2 188405553 188405765 -64850818 - MER21-int LTR ERV1 -3046 3712 3486 1173 277 3 27 chr2 188405777 188406106 -64850477 - MER21-int LTR ERV1 -3776 415 95 615 279 67 30 chr2 188406487 188406785 -64849798 - L1MCc LINE L1 -4887 1536 1228 452 296 71 34 chr2 188407067 188407445 -64849138 - L1MCc LINE L1 -6001 422 31 21 82 0 0 chr2 188407616 188407665 -64848918 + AT_rich Low_complexity Low_complexity 1 49 0 294 29 0 0 chr2 188407708 188407743 -64848840 + (TG)n Simple_repeat Simple_repeat 2 36 0 2006 110 0 14 chr2 188407982 188408297 -64848286 - AluSx SINE Alu 0 311 1 1849 117 21 3 chr2 188408628 188408918 -64847665 - AluSq SINE Alu -16 297 3 216 284 12 12 chr2 188408976 188409057 -64847526 + T-rich Low_complexity Low_complexity 5 85 0 * 239 247 0 45 chr2 188408999 188409088 -64847495 + CT-rich Low_complexity Low_complexity 1 85 0 299 314 7 0 chr2 188409538 188409678 -64846905 - L1 LINE L1 -1811 4335 4195 1767 146 78 28 chr2 188411968 188412325 -64844258 - THE1C LTR MaLR 0 375 1 8304 128 93 38 chr2 188412331 188413821 -64842762 - THE1C-int LTR MaLR -7 1573 3 1776 158 52 33 chr2 188413823 188414191 -64842392 - THE1C LTR MaLR 0 375 1 6650 192 51 57 chr2 188414387 188415821 -64840762 + L1MA8 LINE L1 3316 4757 -2808 638 100 0 10 chr2 188415821 188415921 -64840662 + L1PB1 LINE L1 6048 6146 -5 6650 192 51 57 chr2 188415921 188415941 -64840642 + L1MA8 LINE L1 4757 4776 -2789 1818 117 60 8 chr2 188415941 188416243 -64840340 + AluSg SINE Alu 1 316 0 6650 192 51 57 chr2 188416243 188416877 -64839706 + L1MA8 LINE L1 4776 5391 -2174 5322 166 31 12 chr2 188416908 188418792 -64837791 + L1MA8 LINE L1 5788 7705 -5 34 79 0 0 chr2 188419911 188419987 -64836596 + AT_rich Low_complexity Low_complexity 1 76 0 1250 166 21 115 chr2 188420137 188420510 -64836073 - MER58B DNA MER1_type -3 338 1 910 274 211 14 chr2 188421058 188421551 -64835032 + MLT1G LTR MaLR 1 590 0 641 268 64 32 chr2 188421584 188421804 -64834779 + MIR SINE MIR 32 258 -4 760 219 100 0 chr2 188421824 188421984 -64834599 + MER45A DNA AcHobo 1 176 -2 790 217 94 5 chr2 188422146 188422536 -64834047 - MLT1F LTR MaLR -80 487 3 508 302 40 7 chr2 188422975 188423124 -64833459 + MIR SINE MIR 37 190 -72 182 366 105 17 chr2 188423896 188424068 -64832515 - L2 LINE L2 -147 3125 2939 473 241 78 7 chr2 188424493 188424634 -64831949 + MIR SINE MIR 4 154 -108 1542 227 132 20 chr2 188424647 188425142 -64831441 - MER39 LTR ERV1 0 707 6 221 274 55 0 chr2 188425146 188425219 -64831364 + MIR SINE MIR 186 262 0 221 216 189 0 chr2 188425496 188425570 -64831013 - MIR SINE MIR -12 250 163 2908 136 11 13 chr2 188425589 188426061 -64830522 - L1PB3 LINE L1 -2 6152 5682 474 322 106 24 chr2 188426248 188426674 -64829909 + L1MC/D LINE L1 4160 4620 -1526 22 35 0 0 chr2 188426909 188426938 -64829645 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr2 188427073 188427098 -64829485 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr2 188427119 188427147 -64829436 + AT_rich Low_complexity Low_complexity 1 28 0 2220 144 73 15 chr2 188427713 188428124 -64828459 - MLT1C LTR MaLR -32 435 1 478 262 83 18 chr2 188428260 188428428 -64828155 + L1MC/D LINE L1 5582 5760 -2048 1286 122 0 5 chr2 188429075 188429271 -64827312 + AluJb SINE Alu 85 279 -33 1812 135 7 4 chr2 188430143 188430459 -64826124 + AluSx SINE Alu 1 317 0 267 314 66 29 chr2 188430599 188430736 -64825847 - MIR SINE MIR -38 224 83 261 0 0 0 chr2 188430844 188430873 -64825710 + (TG)n Simple_repeat Simple_repeat 1 29 0 235 400 39 8 chr2 188431647 188431777 -64824806 + MIR3 SINE MIR 21 154 -54 452 242 114 34 chr2 188432090 188432239 -64824344 - MIR SINE MIR -21 241 81 23 56 4 0 chr2 188432413 188432494 -64824089 + AT_rich Low_complexity Low_complexity 1 51 0 211 229 0 43 chr2 188432609 188432679 -64823904 + (TA)n Simple_repeat Simple_repeat 1 67 0 313 318 100 43 chr2 188432715 188432995 -64823588 - L1MC4a LINE L1 -1906 5902 5607 345 275 42 104 chr2 188433148 188433242 -64823341 + L1MC/D LINE L1 5302 5400 -2595 1551 189 44 10 chr2 188433242 188433539 -64823044 + AluJo SINE Alu 6 312 0 345 275 42 104 chr2 188433539 188433753 -64822830 + L1MC/D LINE L1 5400 5591 -2404 216 200 0 33 chr2 188434045 188434105 -64822478 + (TATATG)n Simple_repeat Simple_repeat 1 58 0 2431 51 3 0 chr2 188435739 188436032 -64820551 - AluY SINE Alu -17 294 1 42 0 0 0 chr2 188436063 188436105 -64820478 + AT_rich Low_complexity Low_complexity 1 42 0 7410 41 1 0 chr2 188436105 188437627 -64818956 - L1PA3 LINE L1 0 6155 4633 1090 23 0 0 chr2 188437627 188437755 -64818828 + L1P LINE L1 4355 4482 -1664 393 352 86 63 chr2 188438114 188438509 -64818074 + L2 LINE L2 2869 3272 0 897 269 145 38 chr2 188439568 188440089 -64816494 + MLT1H1 LTR MaLR 1 547 -8 739 251 62 10 chr2 188441854 188442049 -64814534 + MIR SINE MIR 57 261 -1 1510 192 62 3 chr2 188442057 188442396 -64814187 + MER46B DNA MER2_type 2 235 -1 2427 69 0 7 chr2 188442396 188442699 -64813884 + AluY SINE Alu 1 301 -10 248 370 62 62 chr2 188443336 188443706 -64812877 + L2 LINE L2 2901 3270 -2 23 54 0 0 chr2 188444078 188444115 -64812468 + AT_rich Low_complexity Low_complexity 1 37 0 22 35 0 0 chr2 188444304 188444333 -64812250 + AT_rich Low_complexity Low_complexity 1 29 0 36 0 0 0 chr2 188446524 188446560 -64810023 + AT_rich Low_complexity Low_complexity 1 36 0 268 228 122 8 chr2 188446840 188446963 -64809620 - LTR16A LTR ERVL 0 450 314 416 279 44 7 chr2 188447083 188447219 -64809364 - LTR16A LTR ERVL -296 154 14 745 319 85 43 chr2 188447872 188448545 -64808038 - L2 LINE L2 -4 3309 2598 441 0 0 0 chr2 188449442 188449491 -64807092 + (TG)n Simple_repeat Simple_repeat 2 50 0 427 236 6 96 chr2 188450664 188450842 -64805741 + Charlie8 DNA MER1_type 44 205 -2212 249 234 290 9 chr2 188450918 188451025 -64805558 - L3 LINE CR1 -49 1528 1392 3548 186 59 20 chr2 188451044 188451878 -64804705 - L1P LINE L1 -786 5360 4495 2787 232 35 12 chr2 188451877 188452732 -64803851 - L1M4 LINE L1 -2019 4127 3253 * 3422 238 117 25 chr2 188452726 188453691 -64802892 - L1MDa LINE L1 -5470 1070 17 306 290 0 0 chr2 188453866 188453935 -64802648 - L2 LINE L2 -7 3306 3238 461 293 16 5 chr2 188454858 188455046 -64801537 - MER3 DNA MER1_type -19 190 1 181 250 23 0 chr2 188456206 188456250 -64800333 + L2 LINE L2 3261 3305 -8 2246 112 3 10 chr2 188456555 188456858 -64799725 - AluSq SINE Alu -12 301 1 1551 182 55 7 chr2 188457098 188457373 -64799210 - AluJb SINE Alu -22 290 3 26 0 0 0 chr2 188457373 188457399 -64799184 + AT_rich Low_complexity Low_complexity 1 26 0 2364 161 27 5 chr2 188457643 188458052 -64798531 - MER47B DNA MER2_type 0 418 1 5679 218 32 31 chr2 188458170 188458318 -64798265 + L1PA15 LINE L1 2192 2338 -3808 2046 149 0 0 chr2 188458318 188458613 -64797970 - AluSx SINE Alu -17 295 1 5679 218 32 31 chr2 188458613 188460080 -64796503 + L1PA15 LINE L1 2338 3808 -2338 637 291 112 37 chr2 188460182 188460478 -64796105 + L2 LINE L2 2461 2778 -536 489 321 47 19 chr2 188460477 188460689 -64795894 + L2 LINE L2 3002 3219 -94 * 5194 150 23 6 chr2 188460754 188461870 -64794713 - L1PA16 LINE L1 -2 6164 5034 829 260 91 0 chr2 188462165 188462373 -64794210 + MIR SINE MIR 5 231 -31 5565 214 12 42 chr2 188462590 188462646 -64793937 - L1 LINE L1 -1102 5044 4988 1661 173 51 7 chr2 188462646 188462941 -64793642 - AluJb SINE Alu -4 308 1 5565 214 12 42 chr2 188462941 188464471 -64792112 - L1 LINE L1 -1158 4988 3506 4697 186 31 9 chr2 188464598 188466389 -64790194 + L1PA15 LINE L1 4138 5964 -201 967 249 30 0 chr2 188466393 188466662 -64789921 - ERVL LTR ERVL -322 5442 5166 1017 177 11 0 chr2 188466665 188466851 -64789732 + L1PA15 LINE L1 5978 6165 0 453 260 180 25 chr2 188468338 188468538 -64788045 + MIR SINE MIR 4 234 -28 261 0 0 0 chr2 188469188 188469217 -64787366 + (T)n Simple_repeat Simple_repeat 1 29 0 943 311 105 37 chr2 188470018 188470590 -64785993 - MLT2E LTR ERVL 0 628 18 353 267 99 8 chr2 188470623 188470754 -64785829 - ERVL-E LTR ERVL -9 5755 5613 985 231 54 7 chr2 188471018 188471295 -64785288 - ERVL-E LTR ERVL -309 5455 5166 2714 108 11 0 chr2 188471316 188471687 -64784896 + THE1C LTR MaLR 1 375 0 6993 152 17 53 chr2 188471687 188473023 -64783560 + THE1C-int LTR MaLR 1 1288 -292 4411 299 85 29 chr2 188473026 188474067 -64782516 - ERVL-E LTR ERVL -844 4920 3940 1779 114 0 8 chr2 188474067 188474313 -64782270 - AluSg SINE Alu -8 302 59 4411 299 85 29 chr2 188474313 188475191 -64781392 - ERVL-E LTR ERVL -1824 3940 2892 550 267 17 44 chr2 188475223 188475403 -64781180 - ERVL-E LTR ERVL -2942 2822 2648 1422 284 39 37 chr2 188475439 188475982 -64780601 - ERVL-E LTR ERVL -3210 2554 2011 1062 293 65 71 chr2 188475999 188476631 -64779952 - MLT2E LTR ERVL 0 628 1 765 93 14 22 chr2 188478710 188478849 -64777734 + (TTTC)n Simple_repeat Simple_repeat 1 138 0 1124 71 0 0 chr2 188478850 188479004 -64777579 + MLT2A1 LTR ERVL 5 158 -286 5023 125 24 9 chr2 188479004 188479771 -64776812 + LTR17 LTR ERV1 1 778 -2 1981 113 7 10 chr2 188479789 188480091 -64776492 + HERV17 LTR ERV1 17 317 -8309 * 8615 56 3 19 chr2 188480086 188480452 -64776131 + HERV17 LTR ERV1 887 1257 -7369 6956 64 9 0 chr2 188480452 188482006 -64774577 + L1PA5 LINE L1 4592 6154 0 8615 56 3 19 chr2 188482006 188482785 -64773798 + HERV17 LTR ERV1 1257 2014 -6612 * 16523 62 2 9 chr2 188482770 188484179 -64772404 + HERV17 LTR ERV1 2430 3820 -4806 4829 56 2 0 chr2 188484179 188484765 -64771818 + LTR14C LTR ERVK 1 587 0 16523 62 2 9 chr2 188484765 188485519 -64771064 + HERV17 LTR ERV1 3820 4578 -4048 489 59 0 0 chr2 188485507 188485575 -64771008 + HERV17 LTR ERV1 7478 7545 -1081 * 2175 75 0 3 chr2 188485568 188485861 -64770722 + HERV17 LTR ERV1 8335 8626 0 5154 126 6 14 chr2 188485861 188486647 -64769936 + LTR17 LTR ERV1 1 780 0 1791 89 41 4 chr2 188486648 188486919 -64769664 + MLT2A1 LTR ERVL 156 436 -8 276 185 0 0 chr2 188486923 188486977 -64769606 + CT-rich Low_complexity Low_complexity 1 54 0 687 194 0 0 chr2 188486977 188487106 -64769477 - FLAM_C SINE Alu 0 143 15 195 295 74 11 chr2 188487154 188487249 -64769334 - L2 LINE L2 -36 3277 3177 192 245 0 19 chr2 188487316 188487369 -64769214 + L2 LINE L2 3262 3313 0 224 162 0 0 chr2 188487883 188487920 -64768663 - L2 LINE L2 -1 3312 3276 216 349 0 0 chr2 188490752 188490838 -64765745 - L2 LINE L2 -1354 1960 1875 461 200 0 24 chr2 188490853 188490938 -64765645 - MER5A DNA MER1_type 0 189 107 394 233 25 75 chr2 188491044 188491111 -64765472 - MER5A DNA MER1_type -75 114 54 1926 152 75 6 chr2 188491111 188491460 -64765123 - THE1C LTR MaLR 0 375 3 394 233 25 75 chr2 188491460 188491512 -64765071 - MER5A DNA MER1_type -135 54 1 456 300 51 5 chr2 188491791 188492086 -64764497 + LTR33 LTR ERVL 1 344 -177 681 309 69 9 chr2 188492265 188492633 -64763950 + MLT1K LTR MaLR 80 488 -100 652 267 11 6 chr2 188494244 188494420 -64762163 - MER5B DNA MER1_type -1 177 1 457 304 68 29 chr2 188495478 188495685 -64760898 - MIR SINE MIR -19 243 29 496 252 8 8 chr2 188496230 188496349 -64760234 - L2 LINE L2 0 3313 3195 361 265 143 14 chr2 188497569 188497716 -64758867 + LTR33 LTR ERVL 1 166 -355 265 263 101 10 chr2 188497796 188497895 -64758688 + LTR33 LTR ERVL 272 379 -142 702 308 113 19 chr2 188498096 188498521 -64758062 + MLT1L LTR MaLR 143 607 -8 2187 107 0 7 chr2 188498610 188498910 -64757673 + AluSc SINE Alu 1 298 -11 1378 211 18 65 chr2 188499138 188499521 -64757062 - MLT1A1 LTR MaLR 0 365 1 333 0 0 0 chr2 188499857 188499894 -64756689 + (TTA)n Simple_repeat Simple_repeat 3 39 0 4441 56 5 0 chr2 188499894 188500451 -64756132 - L1PA7 LINE L1 -18 6136 5577 4164 74 3 2 chr2 188500451 188501019 -64755564 + L1P LINE L1 4530 5098 -1048 204 355 116 8 chr2 188502726 188502847 -64753736 + L2 LINE L2 3180 3313 0 262 313 79 0 chr2 188502862 188502992 -64753591 - MIR SINE MIR -15 193 44 604 292 89 35 chr2 188503250 188503663 -64752920 - L2 LINE L2 -263 3009 2574 241 352 67 29 chr2 188504053 188504158 -64752425 + L2 LINE L2 3116 3224 -48 657 225 0 84 chr2 188504830 188504884 -64751699 - MIR SINE MIR -2 260 203 1935 122 42 0 chr2 188504884 188505170 -64751413 - AluSq SINE Alu -13 300 3 657 225 0 84 chr2 188505170 188505306 -64751277 - MIR SINE MIR -59 203 86 207 0 0 0 chr2 188506237 188506260 -64750323 + (A)n Simple_repeat Simple_repeat 1 23 0 1702 189 45 3 chr2 188506493 188506827 -64749756 + MER7A DNA MER2_type 1 346 0 2923 156 15 53 chr2 188507095 188507640 -64748943 - Tigger1 DNA MER2_type 0 2418 1895 * 9401 140 26 36 chr2 188507611 188509257 -64747326 - Tigger1 DNA MER2_type -788 1630 1 338 42 21 0 chr2 188509423 188509471 -64747112 + (TG)n Simple_repeat Simple_repeat 1 49 0 377 279 57 118 chr2 188511065 188511380 -64745203 - LTR16A1 LTR ERVL 0 457 162 225 0 0 0 chr2 188511487 188511512 -64745071 + (A)n Simple_repeat Simple_repeat 1 25 0 674 312 84 48 chr2 188511620 188512089 -64744494 + L2 LINE L2 83 602 -2712 480 275 119 6 chr2 188512089 188512249 -64744334 - MER5B DNA MER1_type 0 178 1 197 312 78 64 chr2 188512255 188512348 -64744235 + L2 LINE L2 602 699 -2615 1583 248 155 17 chr2 188512348 188513037 -64743546 - MER20B DNA MER1_type 0 784 1 197 312 78 64 chr2 188513037 188513084 -64743499 + L2 LINE L2 699 744 -2570 413 258 17 8 chr2 188513223 188513343 -64743240 - LTR33 LTR ERVL -97 424 304 371 279 96 0 chr2 188513442 188513578 -64743005 - LTR33 LTR ERVL -349 172 24 419 301 9 0 chr2 188513580 188513693 -64742890 - MER81 DNA DNA 0 114 1 447 252 16 39 chr2 188513724 188513851 -64742732 + L2 LINE L2 2102 2225 -1089 1291 45 0 4 chr2 188513993 188514233 -64742350 + AluY SINE Alu 1 325 0 949 309 107 38 chr2 188514233 188514702 -64741881 + L2 LINE L2 2278 2778 -536 505 321 47 19 chr2 188514701 188514913 -64741670 + L2 LINE L2 3002 3219 -94 * 5406 132 11 21 chr2 188514978 188516093 -64740490 - L1PA16 LINE L1 -3 6163 5034 837 260 91 0 chr2 188516388 188516596 -64739987 + MIR SINE MIR 5 231 -31 3705 201 38 26 chr2 188516813 188516869 -64739714 - L1 LINE L1 -1102 5044 4990 1604 173 51 7 chr2 188516869 188517164 -64739419 - AluJb SINE Alu -4 308 1 3705 201 38 26 chr2 188517164 188517737 -64738846 - L1 LINE L1 -1156 4990 4398 195 69 0 0 chr2 188517737 188517766 -64738817 + (TG)n Simple_repeat Simple_repeat 2 30 0 3705 201 38 26 chr2 188517766 188518035 -64738548 - L1 LINE L1 -1748 4398 4134 6577 117 13 4 chr2 188518251 188519273 -64737310 - L1MA2 LINE L1 0 6304 5274 803 234 0 0 chr2 188519274 188519458 -64737125 - L1MA2 LINE L1 -921 5225 5042 838 228 35 0 chr2 188519493 188519695 -64736888 - L1MA2 LINE L1 -2424 3722 3514 * 14624 162 43 17 chr2 188519686 188520043 -64736540 - L1 LINE L1 -1098 6467 6121 180 0 0 0 chr2 188520043 188520063 -64736520 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 14624 162 43 17 chr2 188520063 188524972 -64731611 - L1 LINE L1 -1444 6121 874 1932 47 0 0 chr2 188525064 188525297 -64731286 - L1PA5 LINE L1 -401 5753 5521 3500 31 0 0 chr2 188525297 188525709 -64730874 + L1PA5 LINE L1 5741 6154 0 210 167 37 19 chr2 188526988 188527042 -64729541 + T-rich Low_complexity Low_complexity 3 57 0 287 366 61 15 chr2 188527488 188527619 -64728964 - MIR3 SINE MIR -40 168 32 402 254 14 87 chr2 188528214 188528352 -64728231 - MER5A DNA MER1_type -22 167 40 192 40 0 0 chr2 188528352 188528377 -64728206 + (TTTTA)n Simple_repeat Simple_repeat 5 29 0 1971 33 8 0 chr2 188528378 188528623 -64727960 - L1PA4 LINE L1 -5 6150 5904 544 305 185 26 chr2 188529469 188530016 -64726567 - L1MC4a LINE L1 -1907 5901 5268 278 301 78 21 chr2 188530408 188530743 -64725840 - L1MC4a LINE L1 -1327 4819 4466 278 232 16 119 chr2 188530738 188530791 -64725792 - L1MA10 LINE L1 -2 6332 6280 2648 238 31 16 chr2 188530791 188531498 -64725085 - L1ME1 LINE L1 -25 6141 5424 214 214 18 0 chr2 188531544 188531600 -64724983 + T-rich Low_complexity Low_complexity 2 58 0 1733 114 8 0 chr2 188531692 188531938 -64724645 - L1PA15-16 LINE L1 -4329 2520 2273 269 319 72 48 chr2 188532560 188532726 -64723857 - MER5A DNA MER1_type -16 173 4 30 0 0 0 chr2 188533117 188533147 -64723436 + AT_rich Low_complexity Low_complexity 1 30 0 4997 174 35 19 chr2 188533256 188534604 -64721979 + L1PA16 LINE L1 4801 6165 -1 1193 188 45 11 chr2 188534965 188535252 -64721331 - MER33 DNA MER1_type 0 324 28 834 168 19 14 chr2 188535745 188535933 -64720650 - L1M3 LINE L1 -348 5808 5642 336 338 77 40 chr2 188537370 188537596 -64718987 + MIR SINE MIR 20 255 -7 28 29 0 0 chr2 188537655 188537690 -64718893 + AT_rich Low_complexity Low_complexity 1 35 0 231 317 99 72 chr2 188539301 188539733 -64716850 + LTR67 LTR ERVL 114 557 0 10713 192 35 48 chr2 188540339 188540833 -64715750 - L1MC3 LINE L1 -8 7777 7278 1728 138 84 31 chr2 188540833 188541189 -64715394 + THE1C LTR MaLR 1 375 0 10713 192 35 48 chr2 188541189 188543571 -64713012 - L1MC3 LINE L1 -507 7278 4942 426 115 0 0 chr2 188543586 188543647 -64712936 + AluJb SINE Alu 64 124 -188 589 234 51 0 chr2 188543661 188543798 -64712785 - L1MC/D LINE L1 -795 5618 5475 28 79 0 0 chr2 188543798 188543861 -64712722 + AT_rich Low_complexity Low_complexity 1 63 0 5362 233 46 58 chr2 188543895 188545698 -64710885 - L1MC/D LINE L1 -905 5310 3576 1834 123 4 0 chr2 188545698 188545959 -64710624 - AluSx SINE Alu -50 262 1 5362 233 46 58 chr2 188545959 188546570 -64710013 - L1MC/D LINE L1 -2639 3576 2959 22416 33 0 0 chr2 188546790 188549517 -64707066 - L1PA3 LINE L1 -935 5211 2485 7422 37 0 0 chr2 188549517 188550457 -64706126 + L1PA3 LINE L1 5215 6154 -1 24 67 0 0 chr2 188550500 188550545 -64706038 + AT_rich Low_complexity Low_complexity 1 45 0 26 0 0 0 chr2 188550728 188550754 -64705829 + AT_rich Low_complexity Low_complexity 1 26 0 356 214 14 0 chr2 188550888 188550958 -64705625 - MER110 LTR ERV1 -420 71 1 226 241 37 0 chr2 188551936 188551990 -64704593 - LTR67 LTR ERVL -107 450 395 2741 192 12 12 chr2 188553243 188553754 -64702829 - LTR53 LTR ERVL 0 519 9 255 303 211 40 chr2 188554444 188554619 -64701964 + MIR3 SINE MIR 1 205 -3 474 313 199 0 chr2 188555169 188555380 -64701203 - MIR SINE MIR 0 262 10 642 40 0 0 chr2 188555392 188555468 -64701115 + L1PA4 LINE L1 6064 6139 -16 1144 238 75 56 chr2 188555850 188556580 -64700003 - L1MEc LINE L1 -3468 2747 2020 588 240 165 10 chr2 188556583 188556783 -64699800 - L1MEc LINE L1 -6132 264 34 1745 197 47 49 chr2 188556867 188557334 -64699249 - L1ME3 LINE L1 -8 6154 5689 405 341 83 10 chr2 188557641 188557846 -64698737 - MIR SINE MIR -16 246 27 197 331 56 38 chr2 188558982 188559142 -64697441 + MIR3 SINE MIR 14 176 -32 23 0 0 0 chr2 188559296 188559319 -64697264 + AT_rich Low_complexity Low_complexity 1 23 0 22 56 0 0 chr2 188559502 188559538 -64697045 + AT_rich Low_complexity Low_complexity 1 36 0 513 342 127 22 chr2 188559667 188560070 -64696513 - L2 LINE L2 -16 3297 2853 24 32 0 0 chr2 188560225 188560256 -64696327 + AT_rich Low_complexity Low_complexity 1 31 0 216 254 28 42 chr2 188560671 188560742 -64695841 - MIR3 SINE MIR -6 202 133 246 213 16 16 chr2 188560891 188560952 -64695631 + MER103 DNA DNA 56 116 -50 1943 218 19 75 chr2 188561017 188561604 -64694979 - MLT2B3 LTR ERVL 0 554 1 904 264 45 8 chr2 188561821 188562067 -64694516 - MIR SINE MIR -1 261 7 246 247 212 0 chr2 188562165 188562250 -64694333 - L3 LINE CR1 -283 1294 1192 1734 170 0 7 chr2 188562256 188562575 -64694008 - AluSx SINE Alu 0 319 3 199 271 153 59 chr2 188562575 188562693 -64693890 - L3 LINE CR1 -353 1224 1096 2514 128 38 24 chr2 188562831 188562948 -64693635 + MSTA LTR MaLR 1 115 -313 2379 184 22 67 chr2 188562948 188563528 -64693055 + MLT2B3 LTR ERVL 1 554 0 2514 128 38 24 chr2 188563528 188563832 -64692751 + MSTA LTR MaLR 115 428 0 1359 255 77 14 chr2 188564144 188564602 -64691981 + MLT1D LTR MaLR 5 467 0 542 292 119 47 chr2 188564902 188565394 -64691189 + L2 LINE L2 2719 3289 -24 1400 276 55 51 chr2 188565758 188567005 -64689578 - L1MCa LINE L1 -4326 2796 1326 2074 285 100 53 chr2 188567025 188567818 -64688765 - L1MCa LINE L1 -5130 1293 420 3472 107 12 4 chr2 188567818 188568323 -64688260 + MER9 LTR ERVK 3 511 0 2074 285 100 53 chr2 188568323 188568746 -64687837 - L1MCa LINE L1 -6003 420 19 233 313 12 0 chr2 188569492 188569572 -64687011 - Charlie8 DNA MER1_type -1 2416 2336 1987 137 0 13 chr2 188573672 188573978 -64682605 - AluSx SINE Alu -2 310 9 186 296 19 0 chr2 188574032 188574086 -64682497 - L2 LINE L2 -3 3310 3256 548 325 44 36 chr2 188574121 188574395 -64682188 + Charlie8 DNA MER1_type 1 276 -2141 609 316 158 55 chr2 188574444 188575078 -64681505 - L2 LINE L2 -457 2857 2159 570 351 64 17 chr2 188575224 188575569 -64681014 + L1MEd LINE L1 389 749 -5370 891 236 102 38 chr2 188575644 188576016 -64680567 + L1MEd LINE L1 866 1299 -4870 3193 233 31 7 chr2 188576210 188576910 -64679673 + L1MA2 LINE L1 22 738 -6827 * 13923 170 29 25 chr2 188576904 188581761 -64674822 + L1MA2 LINE L1 2844 7722 -1 201 214 36 18 chr2 188582017 188582073 -64674510 + GA-rich Low_complexity Low_complexity 2 58 0 434 276 16 16 chr2 188582357 188582484 -64674099 - FLAM_A SINE Alu -2 131 5 1757 149 71 9 chr2 188583859 188584182 -64672401 + MER61A LTR ERV1 1 343 0 2443 190 50 38 chr2 188584182 188584831 -64671752 + MER61A-int LTR ERV1 1 738 -4479 * 23995 105 50 14 chr2 188584828 188588212 -64668371 + MER61A-int LTR ERV1 1320 4901 -316 328 20 41 0 chr2 188588212 188588261 -64668322 + (TTTG)n Simple_repeat Simple_repeat 1 51 0 23995 105 50 14 chr2 188588261 188588591 -64667992 + MER61A-int LTR ERV1 4901 5217 0 1843 122 78 9 chr2 188588591 188588912 -64667671 + MER61A LTR ERV1 1 343 0 21 0 0 0 chr2 188592326 188592347 -64664236 + AT_rich Low_complexity Low_complexity 1 21 0 1683 182 0 7 chr2 188592463 188592754 -64663829 + AluJb SINE Alu 12 300 -12 192 125 0 0 chr2 188593372 188593404 -64663179 + (CA)n Simple_repeat Simple_repeat 2 33 0 762 265 40 18 chr2 188593761 188594004 -64662579 - L1ME1 LINE L1 -98 6332 6088 1533 231 51 34 chr2 188594024 188594518 -64662065 - L1ME1 LINE L1 -964 5442 4941 763 248 30 50 chr2 188594525 188594824 -64661759 - L1ME1 LINE L1 -5181 1228 936 2277 138 25 3 chr2 188595718 188596074 -64660509 - THE1B LTR MaLR 0 364 1 1702 141 128 26 chr2 188596397 188596703 -64659880 - MER1B DNA MER1_type 0 337 1 1432 348 68 24 chr2 188596753 188598265 -64658318 + ERVL LTR ERVL 3584 5122 -363 290 332 52 62 chr2 188598817 188599106 -64657477 + LTR16C LTR ERVL 204 489 -2 454 292 37 6 chr2 188599280 188599441 -64657142 - MER103 DNA DNA 0 166 1 288 284 12 0 chr2 188599800 188599881 -64656702 + MIR SINE MIR 172 253 -9 209 267 17 17 chr2 188600003 188600063 -64656520 + MER5B DNA MER1_type 87 146 -32 970 115 0 143 chr2 188601219 188601428 -64655155 - AluSg/x SINE Alu -8 304 126 12908 211 31 21 chr2 188601428 188605884 -64650699 - L1P5 LINE L1 -698 6172 1670 4194 150 9 5 chr2 188605889 188606550 -64650033 - L1P5 LINE L1 -5369 1494 831 4908 273 28 19 chr2 188606658 188608450 -64648133 - L1P5 LINE L1 -5219 1644 3 3089 131 16 0 chr2 188608938 188609442 -64647141 + L1MA5 LINE L1 5787 6298 -2 334 320 162 13 chr2 188609552 188609786 -64646797 - L1MC4 LINE L1 -80 7962 7694 24 32 0 0 chr2 188610947 188610978 -64645605 + AT_rich Low_complexity Low_complexity 1 31 0 3151 80 18 5 chr2 188611359 188611801 -64644782 + L1PA7 LINE L1 5709 6154 0 22 0 0 0 chr2 188612863 188612885 -64643698 + AT_rich Low_complexity Low_complexity 1 22 0 201 310 97 62 chr2 188613194 188613307 -64643276 - L2 LINE L2 -25 3288 3172 1370 277 64 46 chr2 188614449 188614994 -64641589 - MLT1H1 LTR MaLR 0 555 1 899 287 84 13 chr2 188616206 188616617 -64639966 - MLT1J2 LTR MaLR 0 450 3 1772 135 10 40 chr2 188616840 188617143 -64639440 + AluJb SINE Alu 1 294 -18 184 250 42 0 chr2 188617159 188617207 -64639376 - MIR SINE MIR -100 108 59 195 268 54 0 chr2 188618017 188618073 -64638510 - MER5A DNA MER1_type -30 159 101 551 296 157 4 chr2 188618973 188619240 -64637343 + MER102b DNA MER1_type 1 308 -33 649 332 71 45 chr2 188619602 188620069 -64636514 + L3 LINE CR1 842 1320 -257 2095 114 0 29 chr2 188620214 188620521 -64636062 + AluSq SINE Alu 1 298 -15 35 71 0 0 chr2 188620824 188620894 -64635689 + AT_rich Low_complexity Low_complexity 1 70 0 1989 142 131 8 chr2 188621343 188621724 -64634859 + MSTA LTR MaLR 1 428 0 374 75 75 0 chr2 188621800 188621893 -64634690 + (TA)n Simple_repeat Simple_repeat 1 100 0 1687 228 65 26 chr2 188621893 188622388 -64634195 - LTR40a LTR ERVL -4 515 2 524 308 32 0 chr2 188622794 188622950 -64633633 - MIR SINE MIR -16 246 86 23 0 0 0 chr2 188623326 188623349 -64633234 + AT_rich Low_complexity Low_complexity 1 23 0 240 274 0 0 chr2 188623479 188623530 -64633053 + MIR SINE MIR 15 65 -197 447 296 37 0 chr2 188623665 188623800 -64632783 + MIR SINE MIR 122 261 -1 721 323 152 37 chr2 188623878 188624695 -64631888 + L3 LINE CR1 666 1576 -1 368 235 30 182 chr2 188624790 188625054 -64631529 + L3 LINE CR1 1349 1572 -5 1346 228 46 67 chr2 188625579 188625664 -64630919 - MLT1C LTR MaLR -20 447 362 2164 115 3 16 chr2 188625664 188625976 -64630607 + AluSc SINE Alu 1 308 -1 1346 228 46 67 chr2 188625976 188626325 -64630258 - MLT1C LTR MaLR -105 362 22 1046 227 16 128 chr2 188626379 188626526 -64630057 + MLT1A2 LTR MaLR 34 196 -178 2244 70 0 3 chr2 188626526 188626833 -64629750 + AluSp SINE Alu 2 307 0 1046 227 16 128 chr2 188626833 188626918 -64629665 + MLT1A2 LTR MaLR 196 210 -164 1701 186 0 3 chr2 188626918 188627209 -64629374 + AluJb SINE Alu 17 306 -6 1046 227 16 128 chr2 188627209 188627358 -64629225 + MLT1A2 LTR MaLR 210 374 0 3005 216 56 5 chr2 188627359 188628024 -64628559 + MLT1A2-int LTR MaLR 2 700 -1035 234 239 0 42 chr2 188628043 188628114 -64628469 + MLT1A2-int LTR MaLR 820 887 -484 356 309 0 0 chr2 188628173 188628270 -64628313 + MLT-int LTR MaLR 680 776 -959 2161 214 2 7 chr2 188628391 188628803 -64627780 + MLT1A2-int LTR MaLR 1320 1729 -6 1512 225 38 24 chr2 188628808 188629177 -64627406 + MLT1A2 LTR MaLR 1 374 0 1993 174 20 5 chr2 188629240 188629636 -64626947 - L1MB3 LINE L1 -1 6680 6279 1088 171 35 0 chr2 188629740 188629939 -64626644 - MER2 DNA MER2_type -139 206 1 681 154 10 5 chr2 188629939 188630069 -64626514 - L1P5 LINE L1 -368 5783 5656 343 287 59 45 chr2 188630222 188630424 -64626159 - L1MB3 LINE L1 -336 6283 6079 333 207 14 103 chr2 188631157 188631302 -64625281 - Charlie8 DNA MER1_type -2224 193 62 854 249 118 7 chr2 188633153 188633450 -64623133 - L1MB7 LINE L1 -8 6176 5847 3068 212 85 8 chr2 188633453 188634047 -64622536 - L1MB3 LINE L1 -609 6073 5526 345 47 0 0 chr2 188634047 188634090 -64622493 + (TG)n Simple_repeat Simple_repeat 1 43 0 3068 212 85 8 chr2 188634090 188634529 -64622054 - L1MB3 LINE L1 -1156 5526 4961 238 164 18 0 chr2 188634513 188634568 -64622015 - L1MB3 LINE L1 -2217 4427 4372 * 209 81 0 27 chr2 188634574 188634611 -64621972 + (TTA)n Simple_repeat Simple_repeat 1 36 0 10672 202 7 14 chr2 188634629 188637284 -64619299 - L1PA13 LINE L1 -19 6144 3515 192 40 0 0 chr2 188637284 188637309 -64619274 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 10672 202 7 14 chr2 188637309 188637811 -64618772 - L1PA13 LINE L1 -2648 3515 3011 1689 109 0 0 chr2 188638187 188638417 -64618166 - AluSg/x SINE Alu 0 310 81 1110 194 31 0 chr2 188638469 188638727 -64617856 - L1MB3 LINE L1 -3102 3542 3277 6075 111 9 9 chr2 188638732 188639648 -64616935 - L1MA2 LINE L1 -1 6303 5388 1663 264 84 44 chr2 188639648 188640896 -64615687 - L1MB3 LINE L1 -3355 3289 2048 6189 80 9 11 chr2 188640918 188641777 -64614806 - L1PA8A LINE L1 -6 6125 5268 4825 235 74 27 chr2 188641776 188643539 -64613044 - L1MB3 LINE L1 -4747 1899 14 * 2062 109 66 9 chr2 188643867 188644185 -64612398 + L1MA2 LINE L1 5938 6279 -25 273 29 0 0 chr2 188644185 188644219 -64612364 + (TA)n Simple_repeat Simple_repeat 2 35 0 2062 109 66 9 chr2 188644219 188644247 -64612336 + L1MA2 LINE L1 6279 6304 0 2328 87 0 0 chr2 188644662 188644962 -64611621 + AluY SINE Alu 1 300 -11 234 296 0 68 chr2 188645285 188645317 -64611266 + MIR SINE MIR 20 53 -209 563 318 138 14 chr2 188645317 188645679 -64610904 + MLT1I LTR MaLR 1 407 -2 234 296 0 68 chr2 188645679 188645734 -64610849 + MIR SINE MIR 53 101 -161 1361 326 114 41 chr2 188646713 188646858 -64609725 - L2 LINE L2 -1 3312 3179 2461 67 7 0 chr2 188646858 188647157 -64609426 + AluY SINE Alu 1 301 -10 1361 326 114 41 chr2 188647157 188648821 -64607762 - L2 LINE L2 -134 3179 1376 329 355 58 14 chr2 188648833 188648971 -64607612 + L2 LINE L2 3129 3272 0 699 226 25 102 chr2 188649436 188649671 -64606912 - MER20 DNA MER1_type -1 218 2 362 360 60 10 chr2 188649962 188650162 -64606421 + L3 LINE CR1 1309 1518 -59 7414 132 28 25 chr2 188650336 188651100 -64605483 + HSMAR2 DNA Mariner 2 772 -530 2502 62 0 0 chr2 188651100 188651408 -64605175 + AluY SINE Alu 1 308 -3 7414 132 28 25 chr2 188651408 188651937 -64604646 + HSMAR2 DNA Mariner 772 1298 -4 2534 65 0 0 chr2 188652212 188652521 -64604062 - AluY SINE Alu 0 311 3 788 195 36 0 chr2 188652855 188653050 -64603533 + MER69 DNA AcHobo 2324 2525 -1 222 411 104 28 chr2 188654865 188655220 -64601363 + L2 LINE L2 2872 3253 -19 348 247 0 21 chr2 188655309 188655406 -64601177 + (CA)n Simple_repeat Simple_repeat 2 96 0 230 207 122 0 chr2 188655413 188655495 -64601088 - L1MC4 LINE L1 -1337 6705 6614 493 180 48 122 chr2 188656014 188656203 -64600380 + MER69A DNA AcHobo 1 175 -2 1978 221 47 7 chr2 188656641 188657071 -64599512 + LTR40b LTR ERVL 16 462 0 319 302 85 38 chr2 188657180 188657414 -64599169 + L1ME LINE L1 5398 5662 -459 205 167 0 0 chr2 188657425 188657461 -64599122 + CT-rich Low_complexity Low_complexity 2 37 0 * 208 244 0 0 chr2 188657460 188657501 -64599082 + (TATG)n Simple_repeat Simple_repeat 2 42 0 497 291 7 14 chr2 188657860 188658001 -64598582 + MIR SINE MIR 29 168 -94 202 266 62 47 chr2 188659017 188659081 -64597502 + L2 LINE L2 3210 3274 -39 611 316 113 0 chr2 188659789 188660001 -64596582 + MIR SINE MIR 4 239 -23 2064 137 0 25 chr2 188660336 188660657 -64595926 + AluSq SINE Alu 1 313 0 525 58 35 12 chr2 188660661 188660747 -64595836 + (GAAA)n Simple_repeat Simple_repeat 1 88 0 2571 95 3 0 chr2 188661266 188661625 -64594958 - L1PB1 LINE L1 -1 6150 5791 288 94 16 31 chr2 188661635 188661699 -64594884 + (TA)n Simple_repeat Simple_repeat 1 63 0 198 0 0 0 chr2 188661863 188661885 -64594698 + (TA)n Simple_repeat Simple_repeat 2 23 0 1385 78 0 0 chr2 188661885 188662065 -64594518 - L1PB1 LINE L1 -371 5780 5601 472 95 16 8 chr2 188662066 188662170 -64594413 - L1PA8A LINE L1 -694 5437 5326 24 0 0 0 chr2 188662187 188662211 -64594372 + AT_rich Low_complexity Low_complexity 1 24 0 1862 147 0 14 chr2 188662443 188662729 -64593854 + AluSx SINE Alu 1 282 -30 200 343 55 48 chr2 188663218 188663364 -64593219 + MIR SINE MIR 38 184 -78 208 210 32 0 chr2 188664641 188664703 -64591880 + (TATAA)n Simple_repeat Simple_repeat 5 68 0 1850 165 24 42 chr2 188664710 188665092 -64591491 + THE1C LTR MaLR 1 375 0 44 35 0 0 chr2 188665835 188665893 -64590690 + AT_rich Low_complexity Low_complexity 1 58 0 1193 109 24 66 chr2 188665990 188666047 -64590536 + L1P4 LINE L1 5335 5393 -772 2640 45 0 0 chr2 188666047 188666358 -64590225 + AluY SINE Alu 1 311 0 1193 109 24 66 chr2 188666358 188666511 -64590072 + L1P4 LINE L1 5393 5536 -629 38595 74 26 3 chr2 188666611 188672294 -64584289 - L1P2 LINE L1 -333 5821 3 196 250 0 69 chr2 188673009 188673081 -64583502 - MIR SINE MIR -77 185 119 1036 252 114 22 chr2 188673776 188674093 -64582490 + L2 LINE L2 2456 2801 -513 883 111 2 44 chr2 188674228 188674391 -64582192 - L1MA8 LINE L1 -2 6289 6151 284 196 0 0 chr2 188674396 188674447 -64582136 + MER91 DNA MER1_type 139 189 -1 1051 39 0 0 chr2 188676739 188676868 -64579715 + L1PA5 LINE L1 6015 6143 -11 279 0 0 0 chr2 188676869 188676900 -64579683 + (TA)n Simple_repeat Simple_repeat 2 32 0 417 293 54 45 chr2 188677047 188677269 -64579314 + HAL1b LINE L1 64 287 -1061 295 273 91 26 chr2 188677270 188677424 -64579159 - MER110 LTR ERV1 -6 485 322 257 313 68 65 chr2 188677779 188678115 -64578468 + HAL1b LINE L1 344 680 -668 222 37 0 0 chr2 188679603 188679630 -64576953 + (CA)n Simple_repeat Simple_repeat 2 28 0 334 270 109 15 chr2 188680391 188680528 -64576055 + MLT2E LTR ERVL 25 174 -454 331 321 89 22 chr2 188680519 188680790 -64575793 + MLT2E LTR ERVL 336 624 -4 * 36 0 0 0 chr2 188681111 188681147 -64575436 + AT_rich Low_complexity Low_complexity 1 36 0 242 350 98 7 chr2 188681475 188681618 -64574965 + MIR SINE MIR 101 256 -6 365 229 136 0 chr2 188681621 188681739 -64574844 + MIR SINE MIR 92 225 -37 1239 222 103 22 chr2 188682027 188682387 -64574196 + MLT2C1 LTR ERVL 1 389 -8 378 0 0 0 chr2 188683326 188683368 -64573215 + (TC)n Simple_repeat Simple_repeat 2 43 0 1873 199 12 9 chr2 188683377 188683723 -64572860 + MLT1A1 LTR MaLR 19 365 0 215 231 0 19 chr2 188683734 188683786 -64572797 + CT-rich Low_complexity Low_complexity 3 53 0 495 257 7 27 chr2 188684198 188684346 -64572237 + LTR67 LTR ERVL 408 552 -5 1334 127 18 5 chr2 188685736 188685956 -64570627 + L1P LINE L1 4569 4791 -1355 2132 166 35 26 chr2 188686411 188686838 -64569745 + MSTB1 LTR MaLR 2 432 0 345 376 54 0 chr2 188688072 188688277 -64568306 - MIR SINE MIR 0 262 47 22 0 0 0 chr2 188688677 188688699 -64567884 + AT_rich Low_complexity Low_complexity 1 22 0 413 361 55 34 chr2 188688772 188689099 -64567484 + HAL1b LINE L1 354 687 -661 2112 218 23 25 chr2 188689177 188689659 -64566924 - MLT1D LTR MaLR 0 505 25 25 0 0 0 chr2 188689733 188689758 -64566825 + AT_rich Low_complexity Low_complexity 1 25 0 246 215 31 0 chr2 188690251 188690316 -64566267 + (TA)n Simple_repeat Simple_repeat 1 67 0 613 247 6 32 chr2 188691145 188691303 -64565280 - MER58B DNA MER1_type 0 341 188 720 263 144 52 chr2 188691661 188692030 -64564553 + MLT1J2 LTR MaLR 1 403 -47 22 56 0 0 chr2 188692111 188692147 -64564436 + AT_rich Low_complexity Low_complexity 1 36 0 358 337 61 65 chr2 188692466 188692760 -64563823 + HAL1b LINE L1 391 683 -665 608 322 11 88 chr2 188692869 188693245 -64563338 + LTR16B LTR ERVL 34 380 -84 27 29 0 0 chr2 188693321 188693355 -64563228 + AT_rich Low_complexity Low_complexity 1 34 0 2430 233 21 0 chr2 188693355 188693914 -64562669 + L1MA10 LINE L1 4775 5345 -801 1977 184 59 2 chr2 188693904 188694329 -64562254 + L1MA10 LINE L1 5764 6212 -122 * 203 98 78 0 chr2 188694329 188694380 -64562203 + (TA)n Simple_repeat Simple_repeat 1 55 0 666 160 16 0 chr2 188694380 188694505 -64562078 + L1MA10 LINE L1 6198 6324 -10 26 0 0 0 chr2 188694534 188694560 -64562023 + AT_rich Low_complexity Low_complexity 1 26 0 7708 196 15 40 chr2 188694714 188697563 -64559020 + L1P3 LINE L1 13 2951 -3510 5943 101 31 7 chr2 188697569 188698497 -64558086 + L1PA10 LINE L1 5219 6168 0 2924 181 7 4 chr2 188698987 188699534 -64557049 + L1PA16 LINE L1 5608 6156 -10 205 200 0 0 chr2 188699820 188699860 -64556723 + T-rich Low_complexity Low_complexity 1 40 0 6494 70 11 0 chr2 188700014 188701631 -64554952 - L1PA7 LINE L1 -13 6141 4519 22 0 0 0 chr2 188701663 188701685 -64554898 + AT_rich Low_complexity Low_complexity 1 22 0 206 329 51 25 chr2 188701762 188701841 -64554742 + L2 LINE L2 3007 3087 -185 247 370 36 16 chr2 188702736 188702928 -64553655 + MIR SINE MIR 12 207 -55 30 59 0 0 chr2 188705327 188705378 -64551205 + AT_rich Low_complexity Low_complexity 1 51 0 23 0 0 0 chr2 188705444 188705467 -64551116 + AT_rich Low_complexity Low_complexity 1 23 0 367 256 119 23 chr2 188705595 188705771 -64550812 + HAL1 LINE L1 1712 1904 -603 1495 201 47 14 chr2 188705808 188706172 -64550411 + L1MA9 LINE L1 5593 5968 -323 1282 122 0 37 chr2 188706172 188706361 -64550222 + AluSg/x SINE Alu 99 280 -32 285 29 0 0 chr2 188706363 188706397 -64550186 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 7642 142 21 49 chr2 188706402 188708223 -64548360 + L1MA3 LINE L1 2231 3998 -3567 3721 137 21 6 chr2 188708221 188709233 -64547350 - THE1C-int LTR MaLR -514 1066 1 * 2741 115 0 0 chr2 188709233 188709606 -64546977 - THE1C LTR MaLR 0 375 3 7519 158 20 12 chr2 188709607 188712055 -64544528 + L1MA3 LINE L1 5251 7719 -5 974 252 97 70 chr2 188712134 188712200 -64544383 - MER66A LTR ERV1 -40 438 375 2369 72 0 19 chr2 188712200 188712507 -64544076 - AluY SINE Alu -10 301 1 974 252 97 70 chr2 188712507 188712841 -64543742 - MER66A LTR ERV1 -103 375 27 526 133 188 16 chr2 188712852 188712980 -64543603 + L1MA9 LINE L1 6083 6232 -80 269 226 57 9 chr2 188713025 188713131 -64543452 + HAL1 LINE L1 2082 2192 -315 631 274 44 48 chr2 188713481 188713729 -64542854 + MLT1J LTR MaLR 5 251 -260 37 39 0 0 chr2 188714207 188714258 -64542325 + AT_rich Low_complexity Low_complexity 1 51 0 526 278 19 0 chr2 188714311 188714473 -64542110 + LTR65 LTR ERV1 3 167 -502 301 243 155 10 chr2 188715177 188715280 -64541303 + L1ME LINE L1 5316 5433 -688 1302 204 73 105 chr2 188715284 188715699 -64540884 + MLT1C LTR MaLR 18 418 -49 2009 90 3 3 chr2 188715699 188715987 -64540596 - L1PA13 LINE L1 -4 6159 5872 1302 204 73 105 chr2 188715987 188716036 -64540547 + MLT1C LTR MaLR 418 467 0 305 283 153 22 chr2 188716088 188716311 -64540272 + L1ME LINE L1 5521 5772 -349 1153 283 70 35 chr2 188720116 188720864 -64535719 + L2 LINE L2 2540 3313 0 1506 173 119 24 chr2 188721771 188722107 -64534476 - MSTA LTR MaLR -60 368 1 297 332 46 59 chr2 188722259 188722497 -64534086 - LTR16A LTR ERVL -78 372 138 * 510 239 65 40 chr2 188722491 188722832 -64533751 + MLT1F1 LTR MaLR 172 564 -3 254 250 0 0 chr2 188722859 188722907 -64533676 - LTR16A LTR ERVL -402 48 1 363 261 31 43 chr2 188723225 188723386 -64533197 - HERV16 LTR ERVL -301 4695 4537 744 362 50 20 chr2 188723387 188724337 -64532246 - ERVL LTR ERVL -776 4988 3991 1282 355 68 11 chr2 188724659 188725380 -64531203 - ERVL LTR ERVL -2191 3463 2702 1927 308 51 25 chr2 188725463 188726073 -64530510 - ERVL LTR ERVL -3447 1549 918 2105 128 3 0 chr2 188726073 188726379 -64530204 - AluSg SINE Alu -3 307 1 1927 308 51 25 chr2 188726379 188726454 -64530129 - ERVL LTR ERVL -4078 918 846 1052 316 40 22 chr2 188726489 188726985 -64529598 - ERVL LTR ERVL -4483 513 9 977 325 78 10 chr2 188727009 188727393 -64529190 - LTR16A LTR ERVL -32 418 9 446 135 21 42 chr2 188727715 188727811 -64528772 + L1MB8 LINE L1 6082 6175 -3 201 39 0 0 chr2 188728021 188728047 -64528536 + (TTG)n Simple_repeat Simple_repeat 1 26 0 230 324 78 10 chr2 188728287 188728389 -64528194 - L2 LINE L2 -2 3311 3203 25 31 0 0 chr2 188730271 188730303 -64526280 + AT_rich Low_complexity Low_complexity 1 32 0 539 281 50 12 chr2 188732521 188732681 -64523902 + MIR SINE MIR 71 236 -26 6431 55 2 0 chr2 188732782 188733589 -64522994 + L1PA5 LINE L1 5340 6148 -6 600 256 218 11 chr2 188733845 188734270 -64522313 + L2 LINE L2 2556 3059 -254 2348 89 0 0 chr2 188734588 188734879 -64521704 + AluSc SINE Alu 1 291 -18 461 239 130 7 chr2 188734886 188735024 -64521559 + L2 LINE L2 3159 3313 0 923 303 70 25 chr2 188735143 188735761 -64520822 - L2 LINE L2 0 3313 2633 620 283 21 79 chr2 188736729 188736936 -64519647 + MIR SINE MIR 3 196 -66 1395 159 4 17 chr2 188736936 188737175 -64519408 - MER46A DNA MER2_type 0 236 1 620 283 21 79 chr2 188737175 188737207 -64519376 + MIR SINE MIR 196 228 -34 356 275 36 51 chr2 188737913 188738051 -64518532 - MLT1J2 LTR MaLR -42 408 273 628 177 0 15 chr2 188739368 188739498 -64517085 - MLT1K LTR MaLR 0 588 461 356 316 82 24 chr2 188739498 188739704 -64516879 - LTR33 LTR ERVL 0 521 304 256 225 225 20 chr2 188739735 188739886 -64516697 - LTR33 LTR ERVL -310 211 30 933 321 74 16 chr2 188739926 188740306 -64516277 - MLT1K LTR MaLR -169 419 18 2487 162 14 29 chr2 188741509 188741954 -64514629 - MLT1C LTR MaLR -1 466 29 310 235 20 41 chr2 188742400 188742498 -64514085 - MER103 DNA DNA -68 98 3 524 353 83 8 chr2 188744366 188744632 -64511951 + L3 LINE CR1 1248 1533 -44 193 313 43 55 chr2 188744602 188744765 -64511818 + L2 LINE L2 3132 3292 -21 * 737 251 49 65 chr2 188746597 188746802 -64509781 + MIR SINE MIR 1 203 -59 2394 158 29 21 chr2 188746802 188747221 -64509362 - MSTB LTR MaLR -4 422 1 737 251 49 65 chr2 188747221 188747278 -64509305 + MIR SINE MIR 203 259 -3 218 282 26 64 chr2 188748638 188748716 -64507867 + L2 LINE L2 2979 3053 -260 26 0 0 0 chr2 188748841 188748867 -64507716 + AT_rich Low_complexity Low_complexity 1 26 0 24 0 0 0 chr2 188748956 188748980 -64507603 + AT_rich Low_complexity Low_complexity 1 24 0 5668 146 35 20 chr2 188748981 188750083 -64506500 - L1MA5A LINE L1 -4 6293 5177 1432 200 7 0 chr2 188750072 188750352 -64506231 + L1MA5A LINE L1 4894 5175 -971 * 3858 90 15 21 chr2 188750342 188750957 -64505626 - L1PA13 LINE L1 -354 5809 5198 2294 93 68 0 chr2 188750957 188751310 -64505273 + L1PA13 LINE L1 5786 6163 0 6373 128 19 11 chr2 188751326 188752454 -64504129 + L1MA3 LINE L1 5157 6304 -1 512 262 0 0 chr2 188752623 188752726 -64503857 + Tigger3(Golem) DNA MER2_type 1 103 -2926 * 4067 148 44 4 chr2 188752722 188753443 -64503140 + Tigger3(Golem) DNA MER2_type 2277 3026 -3 392 231 178 72 chr2 188756293 188756557 -64500026 + HAL1 LINE L1 825 1116 -1391 503 277 19 0 chr2 188758598 188758757 -64497826 - L1ME2 LINE L1 -2 6162 6001 * 2435 290 92 46 chr2 188758754 188760095 -64496488 - L1M4 LINE L1 -1313 4833 3556 3754 91 9 15 chr2 188760095 188760633 -64495950 + L1PA13 LINE L1 5622 6156 -7 2435 290 92 46 chr2 188760633 188761425 -64495158 - L1M4 LINE L1 -2590 3556 2802 1936 98 56 25 chr2 188761425 188761711 -64494872 - AluSx SINE Alu -17 295 1 2435 290 92 46 chr2 188761711 188761782 -64494801 - L1M4 LINE L1 -3344 2802 2736 204 40 0 0 chr2 188761782 188761807 -64494776 + (TTTC)n Simple_repeat Simple_repeat 4 28 0 2435 290 92 46 chr2 188761807 188762041 -64494542 - L1M4 LINE L1 -3410 2736 2264 518 259 30 78 chr2 188762058 188762328 -64494255 - L1MCc LINE L1 -4971 1452 1196 238 335 104 42 chr2 188762388 188762743 -64493840 - L1MCc LINE L1 -5214 1209 833 672 332 52 34 chr2 188762750 188763136 -64493447 - L1MCc LINE L1 -6008 415 23 22 35 0 0 chr2 188763178 188763207 -64493376 + AT_rich Low_complexity Low_complexity 1 29 0 1725 161 7 4 chr2 188763310 188763584 -64492999 + AluSx SINE Alu 21 295 -17 646 316 69 4 chr2 188764329 188764730 -64491853 + L1PB4 LINE L1 20 614 -6595 294 368 9 0 chr2 188765289 188765403 -64491180 + L1PB4 LINE L1 1031 1145 -6064 4142 242 12 7 chr2 188765859 188766820 -64489763 + L1PB4 LINE L1 1448 2416 -4793 6609 74 19 0 chr2 188766820 188768258 -64488325 + L1PA7 LINE L1 4697 6151 -3 4142 242 12 7 chr2 188768258 188768275 -64488308 + L1PB4 LINE L1 2416 2431 -4778 * 8094 203 24 49 chr2 188768273 188772483 -64484100 + L1PB4 LINE L1 3266 7209 -9 21 0 0 0 chr2 188772957 188772978 -64483605 + AT_rich Low_complexity Low_complexity 1 21 0 180 152 0 0 chr2 188773234 188773267 -64483316 + (TA)n Simple_repeat Simple_repeat 1 33 0 319 346 37 15 chr2 188774103 188774239 -64482344 + L2 LINE L2 3167 3305 -8 363 369 92 37 chr2 188774240 188774565 -64482018 - L2 LINE L2 -1 3271 2929 239 164 16 0 chr2 188774942 188775003 -64481580 + (TA)n Simple_repeat Simple_repeat 1 62 0 * 480 59 0 0 chr2 188775002 188775070 -64481513 + (GA)n Simple_repeat Simple_repeat 2 69 0 1621 164 4 7 chr2 188775072 188775341 -64481242 - AluJo SINE Alu -44 268 1 282 350 42 17 chr2 188776204 188776324 -64480259 + L2 LINE L2 3190 3312 -1 29 47 0 0 chr2 188776474 188776517 -64480066 + AT_rich Low_complexity Low_complexity 1 43 0 998 197 122 93 chr2 188776528 188776904 -64479679 + MSTD LTR MaLR 1 387 -9 368 289 41 0 chr2 188776906 188777027 -64479556 - MIR SINE MIR -38 224 99 326 268 87 87 chr2 188777135 188777366 -64479217 - L2 LINE L2 -889 2425 2195 1246 195 12 111 chr2 188777882 188778287 -64478296 + MLT1A1 LTR MaLR 1 365 0 195 279 131 0 chr2 188778711 188778772 -64477811 + L2 LINE L2 3244 3312 -1 236 319 53 0 chr2 188778975 188779069 -64477514 - MIR SINE MIR -77 131 33 21 0 0 0 chr2 188780353 188780374 -64476209 + AT_rich Low_complexity Low_complexity 1 21 0 27 29 0 0 chr2 188780499 188780533 -64476050 + AT_rich Low_complexity Low_complexity 1 34 0 2177 111 3 0 chr2 188780950 188781248 -64475335 - AluSq SINE Alu -14 299 1 324 244 189 0 chr2 188782665 188782755 -64473828 + MLT1G LTR MaLR 1 107 -488 670 269 141 84 chr2 188782821 188783155 -64473428 + MLT1G LTR MaLR 243 590 0 24 32 0 0 chr2 188783219 188783250 -64473333 + AT_rich Low_complexity Low_complexity 1 31 0 1989 143 7 0 chr2 188783458 188783752 -64472831 + AluSx SINE Alu 1 296 -16 242 264 226 0 chr2 188783852 188783958 -64472625 - MIR SINE MIR -84 178 49 216 276 216 0 chr2 188783985 188784101 -64472482 + MIR SINE MIR 112 252 -10 187 292 21 0 chr2 188784977 188785025 -64471558 - L2 LINE L2 -2819 495 447 212 379 19 25 chr2 188785263 188785424 -64471159 - L2 LINE L2 -458 2856 2697 589 338 125 38 chr2 188786149 188787078 -64469505 - L2 LINE L2 -614 2700 1691 372 88 0 0 chr2 188787529 188787586 -64468997 + (TG)n Simple_repeat Simple_repeat 2 58 0 185 275 0 0 chr2 188787657 188787697 -64468886 + L2 LINE L2 3257 3296 -17 698 161 6 18 chr2 188787715 188787883 -64468700 + GA-rich Low_complexity Low_complexity 3 168 0 4925 167 17 35 chr2 188790485 188792518 -64464065 - L1MB1 LINE L1 0 6168 3997 1135 280 31 63 chr2 188792517 188792995 -64463588 - L1M3d LINE L1 -5428 463 1 * 22 88 0 0 chr2 188793095 188793152 -64463431 + AT_rich Low_complexity Low_complexity 1 57 0 8910 203 58 25 chr2 188794537 188795087 -64461496 + Charlie6 DNA MER1_type 53 583 -2917 1509 205 22 43 chr2 188795087 188795458 -64461125 + MLT1A1 LTR MaLR 1 363 -2 8910 203 58 25 chr2 188795458 188797016 -64459567 + Charlie6 DNA MER1_type 583 2231 -1269 3600 195 36 18 chr2 188797067 188797959 -64458624 + Charlie6 DNA MER1_type 2593 3500 0 824 335 91 34 chr2 188798070 188798817 -64457766 - L2 LINE L2 -790 2524 1735 1409 287 107 52 chr2 188798818 188799474 -64457109 - MER115 DNA AcHobo -1 692 1 189 107 0 0 chr2 188801059 188801087 -64455496 + (TA)n Simple_repeat Simple_repeat 2 29 0 3050 33 11 0 chr2 188801894 188802259 -64454324 - L1PA3 LINE L1 -1 6154 5786 364 263 132 13 chr2 188805318 188805546 -64451037 - MER20B DNA MER1_type -474 309 55 322 295 141 19 chr2 188805581 188805737 -64450846 - MIR SINE MIR -87 175 1 2156 104 0 10 chr2 188806375 188806682 -64449901 + AluSq SINE Alu 3 306 -7 914 193 68 0 chr2 188806699 188806875 -64449708 - MER5A DNA MER1_type -1 188 1 333 0 0 0 chr2 188806941 188806978 -64449605 + (TA)n Simple_repeat Simple_repeat 2 38 0 467 174 20 0 chr2 188807084 188807182 -64449401 - L1MA5A LINE L1 -1 6296 6197 2792 7 3 0 chr2 188807182 188807489 -64449094 - AluYb8 SINE Alu -10 308 1 604 280 42 26 chr2 188807664 188807853 -64448730 - MIR SINE MIR 0 262 71 702 164 0 0 chr2 188858298 188858463 -64398120 + C-rich Low_complexity Low_complexity 1 165 0 2724 184 6 4 chr2 188858489 188859022 -64397561 + L1P LINE L1 2103 2636 -3510 5690 112 32 2 chr2 188859028 188859933 -64396650 + L1PA10 LINE L1 5219 6149 -19 4000 217 38 47 chr2 188860076 188861611 -64394972 + L1P3 LINE L1 87 1721 -4740 715 297 62 35 chr2 188862479 188862930 -64393653 + LTR16B LTR ERVL 2 464 0 228 215 113 65 chr2 188863087 188863273 -64393310 + L1M4 LINE L1 2983 3177 -2969 22 35 0 0 chr2 188863388 188863417 -64393166 + AT_rich Low_complexity Low_complexity 1 29 0 576 150 9 18 chr2 188863602 188863715 -64392868 - L1MA7 LINE L1 0 6291 6180 286 314 29 0 chr2 188864065 188864167 -64392416 - MER94 DNA DNA 0 134 30 1502 189 18 7 chr2 188864169 188864454 -64392129 + AluJb SINE Alu 3 290 -22 942 331 70 15 chr2 188864473 188865016 -64391567 + L1MCc LINE L1 27 599 -5824 2341 254 40 11 chr2 188865139 188865899 -64390684 + L1MCc LINE L1 784 1565 -4857 1668 246 40 83 chr2 188865896 188865943 -64390640 + L1MCc LINE L1 2341 2388 -4734 * 225 65 0 0 chr2 188865943 188865974 -64390609 + (CATA)n Simple_repeat Simple_repeat 2 32 0 1668 246 40 83 chr2 188865974 188866633 -64389950 + L1MCc LINE L1 2388 3000 -4122 1606 227 78 61 chr2 188866633 188867175 -64389408 - MLT2B3 LTR ERVL 0 554 4 1668 246 40 83 chr2 188867175 188867407 -64389176 + L1MCc LINE L1 3000 3240 -3882 679 234 38 4 chr2 188867407 188867598 -64388985 + L1ME1 LINE L1 5980 6184 0 1337 210 0 62 chr2 188867818 188868127 -64388456 - AluJb SINE Alu -21 291 2 22 0 0 0 chr2 188868293 188868315 -64388268 + AT_rich Low_complexity Low_complexity 1 22 0 244 273 200 27 chr2 188869213 188869323 -64387260 - L2 LINE L2 0 3313 3185 274 239 155 0 chr2 188869350 188869421 -64387162 + FLAM_A SINE Alu 29 110 -23 543 311 114 17 chr2 188869494 188869842 -64386741 - L2 LINE L2 -193 3120 2750 220 306 0 0 chr2 188871169 188871218 -64385365 + L2 LINE L2 451 499 -2815 348 283 155 41 chr2 188871218 188871508 -64385075 + L2 LINE L2 760 1082 -2232 346 373 35 20 chr2 188871547 188871802 -64384781 + L2 LINE L2 1233 1491 -1823 448 294 49 12 chr2 188871913 188872076 -64384507 + MIR SINE MIR 94 262 0 342 259 254 5 chr2 188872119 188872312 -64384271 + L2 LINE L2 1629 1869 -1445 315 358 115 12 chr2 188872356 188872599 -64383984 + L2 LINE L2 2521 2788 -526 348 234 78 42 chr2 188872694 188872861 -64383722 - L1ME4a LINE L1 -206 5915 5743 3370 167 30 36 chr2 188874282 188875008 -64381575 + L1MB7 LINE L1 5447 6168 -16 189 74 0 0 chr2 188875262 188875289 -64381294 + (TC)n Simple_repeat Simple_repeat 2 28 0 24 0 0 0 chr2 188877694 188877718 -64378865 + AT_rich Low_complexity Low_complexity 1 24 0 368 247 27 32 chr2 188878299 188878505 -64378078 - L1ME4a LINE L1 -685 5477 5272 333 315 116 55 chr2 188878521 188879044 -64377539 - L1ME4a LINE L1 -953 5193 4615 280 312 51 65 chr2 188879112 188879526 -64377057 - HAL1 LINE L1 -931 1576 1169 636 304 101 9 chr2 188880490 188880707 -64375876 - MIR SINE MIR 0 262 26 195 125 0 0 chr2 188880836 188880876 -64375707 + (T)n Simple_repeat Simple_repeat 1 40 0 729 252 69 9 chr2 188882893 188883111 -64373472 - MIR SINE MIR -24 238 8 463 248 17 0 chr2 188883391 188883508 -64373075 + MER103 DNA DNA 2 120 -46 505 43 0 29 chr2 188884111 188884181 -64372402 + L1P LINE L1 2499 2566 -3580 799 182 123 11 chr2 188884646 188884833 -64371750 - MER3 DNA MER1_type 0 209 2 374 316 15 15 chr2 188885881 188886014 -64370569 - MIR3 SINE MIR -1 207 75 774 291 39 20 chr2 188886187 188886441 -64370142 - MIR SINE MIR -3 259 1 188 311 39 29 chr2 188887113 188887216 -64369367 + L2 LINE L2 3181 3284 -29 2917 6 0 0 chr2 188887846 188888162 -64368421 - AluYb8 SINE Alu -2 316 1 241 299 115 11 chr2 188888300 188888387 -64368196 - MER5A DNA MER1_type -85 104 9 40719 65 9 2 chr2 188888416 188894514 -64362069 - L1PA5 LINE L1 0 6154 11 21 82 0 0 chr2 188894551 188894600 -64361983 + AT_rich Low_complexity Low_complexity 1 49 0 207 259 0 0 chr2 188895685 188895743 -64360840 + (TATATG)n Simple_repeat Simple_repeat 3 60 0 330 283 60 30 chr2 188895916 188896082 -64360501 - L1ME LINE L1 -478 5643 5473 22 0 0 0 chr2 188896082 188896104 -64360479 + AT_rich Low_complexity Low_complexity 1 22 0 215 241 0 0 chr2 188896184 188896238 -64360345 + T-rich Low_complexity Low_complexity 1 54 0 243 114 0 0 chr2 188896809 188896853 -64359730 + (T)n Simple_repeat Simple_repeat 1 44 0 1154 278 110 54 chr2 188897922 188898073 -64358510 - MLT1E LTR MaLR -122 471 330 1886 174 10 0 chr2 188898073 188898377 -64358206 - AluJo SINE Alu -5 307 1 1154 278 110 54 chr2 188898377 188898671 -64357912 - MLT1E LTR MaLR -263 330 1 485 271 71 36 chr2 188898674 188898762 -64357821 - LTR16C LTR ERVL -120 371 275 2340 121 30 24 chr2 188898762 188899135 -64357448 + THE1C LTR MaLR 1 375 0 485 271 71 36 chr2 188899135 188899186 -64357397 - LTR16C LTR ERVL -216 275 227 1618 188 70 6 chr2 188899269 188899583 -64357000 - MLT2C1 LTR ERVL -52 345 12 1565 237 54 18 chr2 188899583 188900030 -64356553 - MLT1C LTR MaLR -4 463 1 366 227 64 106 chr2 188900042 188900183 -64356400 - LTR16C LTR ERVL -259 232 98 23 0 0 0 chr2 188900479 188900502 -64356081 + AT_rich Low_complexity Low_complexity 1 23 0 2063 174 85 16 chr2 188900870 188901307 -64355276 - MLT1C LTR MaLR 0 467 1 195 129 0 0 chr2 188901330 188901361 -64355222 + (T)n Simple_repeat Simple_repeat 1 31 0 183 80 0 0 chr2 188902232 188902257 -64354326 + (A)n Simple_repeat Simple_repeat 1 25 0 194 338 71 45 chr2 188902607 188902761 -64353822 - MIR3 SINE MIR -48 160 3 704 277 34 50 chr2 188903566 188903826 -64352757 + MIR SINE MIR 4 261 -1 420 292 303 0 chr2 188904150 188904335 -64352248 - MIR SINE MIR -4 258 18 307 238 131 0 chr2 188904345 188904429 -64352154 - L2 LINE L2 0 3313 3219 1294 145 69 53 chr2 188904489 188904807 -64351776 - MER33 DNA MER1_type 0 324 2 293 227 52 41 chr2 188904880 188904977 -64351606 - L2 LINE L2 -426 2888 2791 24 0 0 0 chr2 188905869 188905893 -64350690 + AT_rich Low_complexity Low_complexity 1 24 0 505 281 181 0 chr2 188907762 188907972 -64348611 - MIR SINE MIR -14 248 1 261 282 35 0 chr2 188908105 188908190 -64348393 + MIR SINE MIR 119 206 -56 210 114 23 23 chr2 188910045 188910089 -64346494 + A-rich Low_complexity Low_complexity 5 48 0 29 0 0 0 chr2 188911755 188911784 -64344799 + AT_rich Low_complexity Low_complexity 1 29 0 191 371 42 18 chr2 188911811 188911978 -64344605 + MIR SINE MIR 33 203 -59 265 393 92 0 chr2 188912055 188912251 -64344332 + L3 LINE CR1 293 506 -1071 798 284 8 39 chr2 188912360 188912617 -64343966 + MIR SINE MIR 1 249 -13 236 162 29 44 chr2 188912996 188913064 -64343519 + CT-rich Low_complexity Low_complexity 2 68 0 28 0 0 0 chr2 188913633 188913661 -64342922 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 188913809 188913837 -64342746 + AT_rich Low_complexity Low_complexity 1 28 0 248 273 173 9 chr2 188915265 188915375 -64341208 - LTR16C LTR ERVL -50 441 314 288 336 37 19 chr2 188915657 188915764 -64340819 - L2 LINE L2 -1 3312 3204 1982 160 25 19 chr2 188915809 188916172 -64340411 - MLT1A1 LTR MaLR 0 365 1 348 380 8 0 chr2 188916210 188916339 -64340244 + L2 LINE L2 3141 3270 -2 426 353 201 15 chr2 188916496 188916839 -64339744 + L3 LINE CR1 1115 1521 -56 352 364 7 19 chr2 188917010 188917204 -64339379 - MIR SINE MIR -62 146 2 470 380 98 8 chr2 188918710 188919097 -64337486 + L2 LINE L2 2544 2965 -349 347 288 59 8 chr2 188919267 188919385 -64337198 + L2 LINE L2 3180 3303 -10 1524 300 52 73 chr2 188919520 188919918 -64336665 + HAL1 LINE L1 94 499 -2008 601 41 0 0 chr2 188919918 188919991 -64336592 + MADE1 DNA Mariner 4 76 -4 1524 300 52 73 chr2 188919991 188920871 -64335712 + HAL1 LINE L1 499 1345 -1162 1812 174 0 0 chr2 188921300 188921599 -64334984 + AluSq SINE Alu 1 299 -14 961 285 81 11 chr2 188921690 188922037 -64334546 + HAL1 LINE L1 1473 1843 -664 242 330 0 0 chr2 188922146 188922258 -64334325 + HAL1 LINE L1 2041 2152 -355 791 268 70 20 chr2 188922303 188922605 -64333978 + L1MC4a LINE L1 5584 5900 -1908 252 0 0 0 chr2 188923094 188923122 -64333461 + (TG)n Simple_repeat Simple_repeat 1 28 0 * 315 0 0 0 chr2 188923121 188923156 -64333427 + (GA)n Simple_repeat Simple_repeat 1 35 0 849 130 0 15 chr2 188923176 188923339 -64333244 + AluSg/x SINE Alu 177 312 0 746 280 49 9 chr2 188923731 188923956 -64332627 - MIR SINE MIR -24 238 5 1990 128 56 69 chr2 188925492 188925809 -64330774 + MLT1B LTR MaLR 1 314 -76 6891 25 25 1 chr2 188925809 188926640 -64329943 + L1PA4 LINE L1 5302 6152 -3 1990 128 56 69 chr2 188926640 188926712 -64329871 + MLT1B LTR MaLR 314 385 -5 256 284 0 10 chr2 188927209 188927311 -64329272 + L1MC/D LINE L1 5131 5231 -915 206 324 56 0 chr2 188927412 188927483 -64329100 - L2 LINE L2 -55 3217 3143 467 343 136 55 chr2 188929783 188930495 -64326088 + L2 LINE L2 1217 1870 -1402 2375 156 36 108 chr2 188930495 188930533 -64326050 - MLT2B2 LTR ERVL 0 515 476 444 37 0 0 chr2 188930533 188930587 -64325996 + (TAGA)n Simple_repeat Simple_repeat 3 56 0 2375 156 36 108 chr2 188930587 188931101 -64325482 - MLT2B2 LTR ERVL -39 476 3 467 343 136 55 chr2 188931101 188932292 -64324291 + L2 LINE L2 1870 3272 0 1893 166 28 53 chr2 188932308 188932706 -64323877 + MLT1B LTR MaLR 1 388 -2 1006 122 0 0 chr2 188933026 188933185 -64323398 + AluSp SINE Alu 145 303 0 372 252 90 58 chr2 188933262 188933417 -64323166 - MLT1I LTR MaLR -249 160 1 341 254 142 35 chr2 188933772 188933941 -64322642 - L2 LINE L2 -8 3305 3119 1593 231 45 7 chr2 188933987 188934407 -64322176 - Zaphod DNA AcHobo -1 4030 3595 2818 229 39 57 chr2 188934411 188935297 -64321286 - Zaphod DNA AcHobo -3089 942 73 261 0 0 0 chr2 188935297 188935326 -64321257 + (TG)n Simple_repeat Simple_repeat 2 30 0 2818 229 39 57 chr2 188935326 188935390 -64321193 - Zaphod DNA AcHobo -3958 73 9 361 330 88 33 chr2 188935898 188936171 -64320412 + L1MC4a LINE L1 5637 5924 -1884 320 251 82 50 chr2 188936482 188936701 -64319882 - L1M4 LINE L1 -2155 3991 3766 514 258 71 57 chr2 188936708 188937161 -64319422 - L1M4 LINE L1 -2429 3717 3259 * 621 240 100 26 chr2 188937160 188937539 -64319044 - L1MC5 LINE L1 -11 7950 7544 504 266 196 29 chr2 188937536 188937882 -64318701 + L1MC/D LINE L1 5313 5716 -2092 * 19491 168 53 15 chr2 188937913 188939219 -64317364 + L1MA2 LINE L1 22 1277 -6288 189 0 0 0 chr2 188939219 188939240 -64317343 + (TGG)n Simple_repeat Simple_repeat 1 21 0 19491 168 53 15 chr2 188939240 188941044 -64315539 + L1MA2 LINE L1 1277 3011 -4554 333 0 0 0 chr2 188941044 188941081 -64315502 + (TG)n Simple_repeat Simple_repeat 2 38 0 2145 89 4 0 chr2 188941081 188941362 -64315221 - AluY SINE Alu -29 282 1 19491 168 53 15 chr2 188941362 188943144 -64313439 + L1MA2 LINE L1 3010 5101 -2464 4574 46 0 0 chr2 188943135 188943698 -64312885 - L1PA3 LINE L1 -1171 4975 4413 * 7542 25 0 0 chr2 188943698 188944870 -64311713 + L1PA3 LINE L1 5001 6155 0 8095 169 24 10 chr2 188944872 188947477 -64309106 + L1MA2 LINE L1 5083 7723 0 1495 189 60 67 chr2 188947542 188947959 -64308624 - LTR52 LTR ERVL -7 414 1 1539 184 0 7 chr2 188948808 188949107 -64307476 - L1MA7 LINE L1 -7 6284 5988 244 286 0 0 chr2 188950788 188950844 -64305739 + CT-rich Low_complexity Low_complexity 5 60 0 1954 93 0 0 chr2 188952253 188952501 -64304082 - AluSq SINE Alu -11 302 55 867 58 0 0 chr2 188952501 188952604 -64303979 - AluSp SINE Alu -210 103 1 217 217 365 9 chr2 188955657 188955772 -64300811 + L2 LINE L2 3155 3310 -3 320 0 25 0 chr2 188956909 188956949 -64299634 + (TTTTG)n Simple_repeat Simple_repeat 5 45 0 247 396 50 10 chr2 188958259 188958461 -64298122 + L2 LINE L2 2872 3081 -191 1945 58 0 0 chr2 188961807 188962049 -64294534 - L1PA7 LINE L1 -4 6150 5909 253 303 40 0 chr2 188962646 188962722 -64293861 + MIR SINE MIR 74 152 -56 249 276 72 88 chr2 188964830 188965011 -64291572 + MER5B DNA MER1_type 1 178 0 604 200 124 55 chr2 188965465 188965610 -64290973 - MER5A DNA MER1_type 0 189 35 214 125 0 42 chr2 188965748 188965796 -64290787 + (TTTTG)n Simple_repeat Simple_repeat 2 47 0 5646 169 13 77 chr2 188967467 188968205 -64288378 + L1PA16 LINE L1 3976 4760 -1406 2158 122 0 10 chr2 188968205 188968509 -64288074 - AluSx SINE Alu -11 301 1 5646 169 13 77 chr2 188968509 188968873 -64287710 + L1PA16 LINE L1 4760 5146 -1020 400 75 0 0 chr2 188968873 188968926 -64287657 + Alu SINE Alu 1 53 -257 232 239 0 0 chr2 188968930 188968976 -64287607 + Alu SINE Alu 242 287 -13 5646 169 13 77 chr2 188968976 188970127 -64286456 + L1PA16 LINE L1 5149 6162 -4 304 103 59 73 chr2 188970245 188970313 -64286270 + MER53 DNA DNA 123 189 0 736 254 6 22 chr2 188970338 188970519 -64286064 + MER5B DNA MER1_type 1 178 0 287 104 21 0 chr2 188970777 188970825 -64285758 + (TG)n Simple_repeat Simple_repeat 2 50 0 22 35 0 0 chr2 188971751 188971780 -64284803 + AT_rich Low_complexity Low_complexity 1 29 0 533 317 58 41 chr2 188972994 188973237 -64283346 - MIR SINE MIR -4 258 12 5266 130 5 16 chr2 188973503 188974922 -64281661 - L1PA16 LINE L1 -3 6163 4739 336 145 16 0 chr2 188975182 188975244 -64281339 + MADE1 DNA Mariner 18 80 0 718 264 122 5 chr2 188975394 188975591 -64280992 - MIR SINE MIR -10 252 33 30 27 0 0 chr2 188976791 188976828 -64279755 + AT_rich Low_complexity Low_complexity 1 37 0 258 213 85 0 chr2 188976886 188976965 -64279618 - MIR SINE MIR -68 140 62 299 361 25 25 chr2 188977370 188977489 -64279094 - L2 LINE L2 -193 3079 2961 234 296 74 37 chr2 188977514 188977595 -64278988 - L2 LINE L2 -55 3217 3134 490 93 23 0 chr2 188977789 188977875 -64278708 + (GA)n Simple_repeat Simple_repeat 1 88 0 444 298 152 13 chr2 188978949 188979107 -64277476 - MER5A DNA MER1_type -6 183 4 256 248 8 107 chr2 188981924 188982045 -64274538 - MER103 DNA DNA -1 165 57 295 330 68 0 chr2 188982530 188982648 -64273935 + LTR16A LTR ERVL 2 127 -323 397 279 20 41 chr2 188982780 188982927 -64273656 + LTR16B LTR ERVL 319 462 -2 187 344 44 11 chr2 188983369 188983459 -64273124 - L2 LINE L2 -612 2702 2610 510 209 0 33 chr2 188984059 188984150 -64272433 + MER58A DNA MER1_type 2 89 -18 408 129 16 0 chr2 188984137 188984199 -64272384 + MER58A DNA MER1_type 156 218 -6 * 556 282 13 75 chr2 188984252 188984479 -64272104 - MER58C DNA MER1_type -1 214 2 2880 150 15 6 chr2 188984486 188985005 -64271578 - L1MA3 LINE L1 0 6305 5782 2650 42 29 3 chr2 188985099 188985482 -64271101 - MER11A LTR ERVK -777 489 1 597 352 45 4 chr2 188985671 188985918 -64270665 - MIR SINE MIR -3 259 3 222 325 158 9 chr2 188986666 188986780 -64269803 - MIR SINE MIR -25 237 107 800 173 39 142 chr2 188986857 188987267 -64269316 - LTR37B LTR ERV1 0 468 101 401 270 18 0 chr2 188987278 188987389 -64269194 + MER81 DNA DNA 2 114 0 283 164 137 14 chr2 188987389 188987462 -64269121 - LTR37B LTR ERV1 -386 82 1 22 56 0 0 chr2 188989857 188989893 -64266690 + AT_rich Low_complexity Low_complexity 1 36 0 443 87 14 0 chr2 188990325 188990394 -64266189 + (CA)n Simple_repeat Simple_repeat 1 70 0 466 295 31 0 chr2 188991212 188991341 -64265242 + MIR SINE MIR 29 161 -101 357 125 0 0 chr2 188993402 188993458 -64263125 + (TTCC)n Simple_repeat Simple_repeat 1 56 0 312 27 0 0 chr2 188993663 188993700 -64262883 + (TG)n Simple_repeat Simple_repeat 2 38 0 3407 144 46 31 chr2 188994000 188994797 -64261786 + pTR5 LTR ERV1 742 2025 -413 240 265 31 20 chr2 188994797 188994895 -64261688 + LTR30 LTR ERV1 544 642 -80 2390 97 0 0 chr2 188994895 188995226 -64261357 + pTR5 LTR ERV1 66 396 -2042 1665 133 63 4 chr2 188995679 188995950 -64260633 + AluSq SINE Alu 1 287 -26 1619 164 104 9 chr2 188998900 188999217 -64257366 - MER7A DNA MER2_type 0 346 2 198 382 0 0 chr2 188999376 188999444 -64257139 - L2 LINE L2 -22 3250 3183 1240 144 21 45 chr2 189000780 189001023 -64255560 - THE1A LTR MaLR 0 355 119 1938 158 134 3 chr2 189001084 189001471 -64255112 - L1M2 LINE L1 -480 5811 5374 7940 170 46 17 chr2 189001471 189003080 -64253503 - MER52A LTR ERV1 0 1755 1 2414 175 25 88 chr2 189003095 189003790 -64252793 - L1P LINE L1 -767 5389 4738 203 133 62 26 chr2 189003817 189003930 -64252653 + (TA)n Simple_repeat Simple_repeat 1 117 0 580 98 85 0 chr2 189003956 189004120 -64252463 + (TA)n Simple_repeat Simple_repeat 1 178 0 536 96 72 10 chr2 189004157 189004559 -64252024 + (TA)n Simple_repeat Simple_repeat 1 426 0 229 234 0 43 chr2 189004577 189004671 -64251912 - L1MC4 LINE L1 -1339 6703 6614 334 124 57 19 chr2 189004671 189004776 -64251807 + (TA)n Simple_repeat Simple_repeat 1 109 0 188 234 11 11 chr2 189004756 189004931 -64251652 + (TTATA)n Simple_repeat Simple_repeat 5 179 0 * 488 93 80 7 chr2 189004912 189005063 -64251520 + (TA)n Simple_repeat Simple_repeat 1 162 0 5742 214 47 12 chr2 189005063 189006014 -64250569 - L1M2 LINE L1 -1404 4742 3826 2008 124 3 3 chr2 189006014 189006319 -64250264 - AluSg SINE Alu 0 305 1 5742 214 47 12 chr2 189006319 189007664 -64248919 - L1M2 LINE L1 -2320 3826 2189 802 260 73 24 chr2 189009119 189009365 -64247218 + MIR SINE MIR 1 258 -4 477 320 0 8 chr2 189010156 189010278 -64246305 - MIR SINE MIR -64 144 24 1477 178 22 12 chr2 189011143 189011463 -64245120 - MER33 DNA MER1_type -1 323 1 260 277 67 105 chr2 189012133 189012371 -64244212 - L2 LINE L2 -514 2800 2572 429 325 63 19 chr2 189012647 189012853 -64243730 - MIR SINE MIR -47 215 1 26 30 0 0 chr2 189013157 189013190 -64243393 + AT_rich Low_complexity Low_complexity 1 33 0 29 0 0 0 chr2 189013429 189013458 -64243125 + AT_rich Low_complexity Low_complexity 1 29 0 6699 167 30 10 chr2 189013686 189014376 -64242207 - L1PA13 LINE L1 -3 6160 5486 2447 72 0 3 chr2 189014376 189014680 -64241903 - AluY SINE Alu -8 303 1 6699 167 30 10 chr2 189014680 189016133 -64240450 - L1PA13 LINE L1 -677 5486 4019 3402 176 14 12 chr2 189016133 189016276 -64240307 + L1P LINE L1 3363 3504 -2642 1915 113 128 21 chr2 189016276 189016605 -64239978 + THE1B LTR MaLR 1 364 0 3402 176 14 12 chr2 189016605 189017119 -64239464 + L1P LINE L1 3504 4021 -2125 355 225 7 130 chr2 189018059 189018197 -64238386 - L2 LINE L2 -1 3312 3192 769 349 59 15 chr2 189018232 189018622 -64237961 - MLT1I LTR MaLR 0 409 3 2154 133 33 30 chr2 189018917 189019278 -64237305 + THE1B LTR MaLR 3 364 0 690 226 32 39 chr2 189019470 189019625 -64236958 + FRAM SINE Alu 2 155 -11 299 265 153 9 chr2 189021620 189021802 -64234781 + MER58C DNA MER1_type 1 213 -2 281 216 80 34 chr2 189022965 189023085 -64233498 - MLT1J2 LTR MaLR -281 128 18 2022 122 14 17 chr2 189024053 189024348 -64232235 + AluSg SINE Alu 1 294 -16 589 253 83 66 chr2 189024553 189024794 -64231789 + Charlie8 DNA MER1_type 4 248 -2169 662 268 107 49 chr2 189025234 189025600 -64230983 - MLT1K LTR MaLR -18 570 184 426 302 6 31 chr2 189025751 189025910 -64230673 - MER5A DNA MER1_type -33 156 2 692 261 39 8 chr2 189025952 189026147 -64230436 - MIR SINE MIR -28 234 37 3984 94 4 0 chr2 189028257 189028809 -64227774 - MER41A LTR ERV1 0 554 1 2024 244 116 14 chr2 189028919 189029455 -64227128 + MER77 LTR ERV1 40 601 -4 283 302 79 29 chr2 189029740 189029879 -64226704 - MIR SINE MIR -1 261 116 848 293 114 43 chr2 189029953 189030469 -64226114 + L2 LINE L2 1737 2289 -1025 736 270 162 39 chr2 189030878 189031286 -64225297 + L2 LINE L2 2852 3309 -4 183 350 0 33 chr2 189031306 189031366 -64225217 - MIR SINE MIR -197 65 8 196 323 266 0 chr2 189031429 189031553 -64225030 - L2 LINE L2 -217 3055 2899 2217 115 0 0 chr2 189032729 189033033 -64223550 + AluSc SINE Alu 1 304 -5 560 208 28 0 chr2 189033886 189033992 -64222591 - Tigger3(Golem) DNA MER2_type 0 3038 2930 833 232 78 96 chr2 189034000 189034436 -64222147 + MSTC LTR MaLR 1 428 0 7681 206 57 29 chr2 189034442 189036119 -64220464 + MLT1A1-int LTR MaLR 8 1730 -5 922 246 49 61 chr2 189036127 189036544 -64220039 + MLT1A1 LTR MaLR 1 363 -2 215 356 106 53 chr2 189036681 189036945 -64219638 + L2 LINE L2 2968 3245 -27 25 0 0 0 chr2 189038593 189038618 -64217965 + AT_rich Low_complexity Low_complexity 1 25 0 2520 139 44 2 chr2 189038707 189039118 -64217465 + MSTB1 LTR MaLR 5 432 0 741 178 22 44 chr2 189039459 189039639 -64216944 + LTR41 LTR ERVL 9 184 -589 250 375 31 0 chr2 189039718 189039814 -64216769 + LTR41 LTR ERVL 342 440 -333 507 189 79 100 chr2 189039847 189040037 -64216546 + LTR41 LTR ERVL 583 768 -5 931 60 15 8 chr2 189040054 189040187 -64216396 - AluY SINE Alu 0 311 178 307 312 101 1 chr2 189040190 189040324 -64216259 - MIR SINE MIR -63 145 36 258 275 12 0 chr2 189040350 189040430 -64216153 - MER94 DNA DNA -52 82 2 374 221 26 13 chr2 189040516 189040593 -64215990 - MER21B LTR ERV1 -767 96 19 * 422 280 25 0 chr2 189040567 189040685 -64215898 - MER21B LTR ERV1 -731 132 12 526 156 9 46 chr2 189041031 189041140 -64215443 + MER31A LTR ERV1 353 457 -28 30 0 0 0 chr2 189041160 189041190 -64215393 + AT_rich Low_complexity Low_complexity 1 30 0 1905 138 17 10 chr2 189042883 189043173 -64213410 - AluSx SINE Alu -20 292 1 1380 308 77 45 chr2 189044406 189044615 -64211968 + L2 LINE L2 2149 2350 -964 1694 184 7 20 chr2 189044615 189044920 -64211663 - AluJo SINE Alu -11 301 1 1380 308 77 45 chr2 189044920 189045424 -64211159 + L2 LINE L2 2350 2885 -429 334 252 125 35 chr2 189047302 189047590 -64208993 - L1M4 LINE L1 -2806 3340 3032 1512 132 16 12 chr2 189147666 189147909 -64108674 + AluSc SINE Alu 1 244 -65 1021 227 30 94 chr2 189148364 189148770 -64107813 + MLT1B LTR MaLR 11 390 0 312 270 38 38 chr2 189148838 189148997 -64107586 - L1ME LINE L1 -5358 712 554 550 264 12 30 chr2 189148998 189149165 -64107418 - MER77 LTR ERV1 -39 566 403 1775 114 57 4 chr2 189149266 189149528 -64107055 - AluSc SINE Alu -33 276 1 266 286 0 14 chr2 189149942 189150012 -64106571 + L2 LINE L2 3201 3269 -3 358 250 0 0 chr2 189150457 189150533 -64106050 - MER2 DNA MER2_type 0 345 270 745 155 135 7 chr2 189150561 189150709 -64105874 - MER2 DNA MER2_type -138 207 41 3936 93 0 2 chr2 189151076 189151579 -64105004 + L1PA7 LINE L1 5652 6153 -1 230 118 0 59 chr2 189152261 189152312 -64104271 + (TCTCCC)n Simple_repeat Simple_repeat 1 48 0 238 299 104 30 chr2 189152453 189152509 -64104074 - MIR SINE MIR -56 206 156 2235 94 17 0 chr2 189152509 189152796 -64103787 - AluSg SINE Alu -18 292 1 238 299 104 30 chr2 189152796 189152903 -64103680 - MIR SINE MIR -106 156 31 2084 178 59 13 chr2 189153245 189153277 -64103306 - MLT2D LTR ERVL -8 406 377 360 0 0 0 chr2 189153277 189153317 -64103266 + (TG)n Simple_repeat Simple_repeat 2 41 0 2084 178 59 13 chr2 189153317 189153672 -64102911 - MLT2D LTR ERVL -37 377 1 3170 53 2 0 chr2 189153866 189154260 -64102323 + L1P3 LINE L1 856 1250 -5211 350 197 80 29 chr2 189155405 189155542 -64101041 - MER113 DNA MER1_type? -376 145 2 197 309 232 17 chr2 189155576 189155757 -64100826 + MIR SINE MIR 40 259 -3 813 143 0 43 chr2 189155811 189155951 -64100632 + FLAM_C SINE Alu 1 134 -9 232 292 15 15 chr2 189155980 189156045 -64100538 - MIR SINE MIR -95 113 49 2795 0 0 0 chr2 189156183 189156481 -64100102 - AluYa5 SINE Alu -13 298 1 472 209 9 9 chr2 189156731 189156846 -64099737 - FLAM_C SINE Alu -22 121 7 611 179 36 14 chr2 189157032 189157172 -64099411 - L1ME1 LINE L1 -9 6157 6015 457 130 17 157 chr2 189157173 189157288 -64099295 - MLT1C LTR MaLR -368 99 1 1064 219 115 43 chr2 189157288 189157882 -64098701 - L1ME1 LINE L1 -543 5623 4976 5867 134 78 39 chr2 189157882 189158372 -64098211 - Tigger3b DNA MER2_type -1799 1229 760 1676 178 4 4 chr2 189158372 189158641 -64097942 - AluJo SINE Alu -30 282 14 5867 134 78 39 chr2 189158641 189159332 -64097251 - Tigger3b DNA MER2_type -2268 760 2 1064 219 115 43 chr2 189159332 189159363 -64097220 - L1ME1 LINE L1 -1190 4976 4949 2052 139 14 12 chr2 189159366 189159712 -64096871 - MER6 DNA MER2_type 0 865 259 284 317 14 7 chr2 189160159 189160304 -64096279 + (TA)n Simple_repeat Simple_repeat 2 147 0 21 36 0 0 chr2 189160628 189160656 -64095927 + AT_rich Low_complexity Low_complexity 1 28 0 243 232 43 58 chr2 189160768 189160837 -64095746 + MIR3 SINE MIR 120 187 -21 2008 128 14 0 chr2 189160838 189161127 -64095456 - AluSq SINE Alu -20 293 1 1733 153 21 73 chr2 189161541 189161926 -64094657 - L1MA9 LINE L1 -7 6305 5941 1466 199 136 19 chr2 189161961 189162379 -64094204 - MLT1C LTR MaLR 0 467 1 247 131 0 49 chr2 189163215 189163276 -64093307 + (TTTTC)n Simple_repeat Simple_repeat 1 58 0 318 132 0 0 chr2 189163276 189163329 -64093254 + (TCCC)n Simple_repeat Simple_repeat 3 55 0 7237 47 4 2 chr2 189163601 189165190 -64091393 + L1PA5 LINE L1 4564 6154 0 21 36 0 0 chr2 189165891 189165919 -64090664 + AT_rich Low_complexity Low_complexity 1 28 0 1030 161 75 5 chr2 189166087 189166273 -64090310 - MER30 DNA MER1_type 0 230 32 1086 221 37 8 chr2 189166616 189166860 -64089723 + L1M4 LINE L1 4688 4938 -1208 1675 171 42 39 chr2 189166861 189167226 -64089357 + MER6 DNA MER2_type -7 358 -78 235 91 0 0 chr2 189167631 189167664 -64088919 - MER53 DNA DNA -156 33 1 474 203 203 20 chr2 189168683 189168831 -64087752 + MER3 DNA MER1_type 2 129 -80 739 240 211 0 chr2 189169181 189169389 -64087194 - MIR SINE MIR -8 254 3 25 0 0 0 chr2 189170453 189170478 -64086105 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr2 189171088 189171111 -64085472 + AT_rich Low_complexity Low_complexity 1 23 0 225 196 0 22 chr2 189171320 189171366 -64085217 + tRNA-Met-e tRNA tRNA 6 50 -25 200 279 152 82 chr2 189171886 189172044 -64084539 - MIR3 SINE MIR -10 198 30 655 202 173 133 chr2 189172046 189172422 -64084161 - MSTD LTR MaLR -2 394 4 316 283 43 11 chr2 189173767 189173859 -64082724 - L2 LINE L2 -16 3297 3203 687 183 8 0 chr2 189173897 189174017 -64082566 - FLAM_A SINE Alu -12 130 10 1606 199 104 31 chr2 189174111 189174467 -64082116 - MLT1F1 LTR MaLR -7 560 179 285 291 76 0 chr2 189174464 189174543 -64082040 - MLT1G1 LTR MaLR -306 224 140 * 744 227 78 19 chr2 189174585 189174798 -64081785 - MLT1G1 LTR MaLR -374 207 1 515 309 95 95 chr2 189174798 189175584 -64080999 - L2 LINE L2 -650 2664 1876 1011 139 70 14 chr2 189175584 189175799 -64080784 - L1MA4 LINE L1 0 6300 6074 515 309 95 95 chr2 189175799 189176042 -64080541 - L2 LINE L2 -1437 1877 1635 21 36 0 0 chr2 189176480 189176508 -64080075 + AT_rich Low_complexity Low_complexity 1 28 0 2670 10 3 0 chr2 189176891 189177188 -64079395 + AluYa5 SINE Alu 1 298 -13 944 85 8 0 chr2 189177189 189177353 -64079230 + AluSg/x SINE Alu 182 346 0 2187 86 0 20 chr2 189177512 189177804 -64078779 + AluSc SINE Alu 19 304 -5 1596 189 0 42 chr2 189178284 189178597 -64077986 + AluJb SINE Alu 1 300 -12 239 133 22 0 chr2 189180863 189180908 -64075675 + GA-rich Low_complexity Low_complexity 1 46 0 2616 114 3 0 chr2 189180951 189181312 -64075271 - THE1B LTR MaLR 0 364 3 10495 108 6 62 chr2 189181314 189182988 -64073595 - THE1B-int LTR MaLR 0 1580 1 2642 110 0 3 chr2 189182988 189183353 -64073230 - THE1B LTR MaLR 0 364 1 1459 186 0 20 chr2 189183805 189184093 -64072490 + AluJb SINE Alu 36 318 0 781 128 14 7 chr2 189184544 189184692 -64071891 + CT-rich Low_complexity Low_complexity 1 149 0 2432 195 71 45 chr2 189185329 189185908 -64070675 + MER82 DNA MER2_type 1 594 -59 411 177 76 0 chr2 189185992 189186071 -64070512 + Tigger5 DNA MER2_type 1 85 -2238 242 121 91 45 chr2 189186120 189186186 -64070397 - Tigger5 DNA MER2_type -5 2318 2250 306 196 18 0 chr2 189186207 189186263 -64070320 + MER82 DNA MER2_type 597 653 0 733 276 145 4 chr2 189186675 189186903 -64069680 + MIR SINE MIR 2 261 -1 21 0 0 0 chr2 189189521 189189542 -64067041 + AT_rich Low_complexity Low_complexity 1 21 0 771 292 102 35 chr2 189191197 189191708 -64064875 - L1ME3A LINE L1 -285 5885 5341 1113 263 137 24 chr2 189191749 189192558 -64064025 - L1ME3A LINE L1 -863 5283 4383 2090 113 10 0 chr2 189192833 189193124 -64063459 - AluSc SINE Alu -15 294 1 504 69 0 28 chr2 189193289 189193381 -64063202 - Alu SINE Alu 0 310 224 31 0 0 0 chr2 189193571 189193602 -64062981 + AT_rich Low_complexity Low_complexity 1 31 0 346 227 82 56 chr2 189193811 189194115 -64062468 - L1ME3A LINE L1 -2866 3280 2969 364 339 20 26 chr2 189194117 189194312 -64062271 - L1ME3A LINE L1 -3378 2768 2575 1265 36 24 0 chr2 189195888 189196053 -64060530 + L1P LINE L1 4242 4410 -1736 418 298 63 20 chr2 189196504 189196756 -64059827 + AluSc SINE Alu 47 309 0 2102 92 11 0 chr2 189196951 189197224 -64059359 - AluSg SINE Alu -18 292 17 669 154 148 12 chr2 189197515 189197684 -64058899 - L1MD3 LINE L1 -126 7869 7678 559 278 92 6 chr2 189198066 189198239 -64058344 + MIR3 SINE MIR 12 199 -9 244 230 287 0 chr2 189198317 189198404 -64058179 - MIR SINE MIR -80 182 71 445 177 101 0 chr2 189198612 189198691 -64057892 + Tigger4(Zombi) DNA MER2_type 1 87 -2644 * 2499 123 43 7 chr2 189198688 189199110 -64057473 + Tigger4(Zombi) DNA MER2_type 2295 2731 0 630 274 94 38 chr2 189199128 189199552 -64057031 - L1ME4a LINE L1 -57 6064 5617 646 237 17 6 chr2 189201030 189201203 -64055380 + MER5B DNA MER1_type 1 175 -3 460 274 33 46 chr2 189201478 189201631 -64054952 + L2 LINE L2 3118 3268 -4 618 316 142 66 chr2 189202799 189203568 -64053015 + L2 LINE L2 2150 2976 -338 204 301 0 48 chr2 189203774 189203857 -64052726 + L2 LINE L2 3235 3313 0 185 238 62 75 chr2 189204806 189204886 -64051697 + L2 LINE L2 3193 3271 -1 418 191 235 19 chr2 189206177 189206339 -64050244 + MIR SINE MIR 56 252 -10 238 282 63 21 chr2 189206664 189206806 -64049777 - L1ME3A LINE L1 -230 5940 5793 1377 96 5 15 chr2 189207769 189207968 -64048615 + MER107 DNA MER1_type 1 197 0 25 83 0 0 chr2 189208990 189209050 -64047533 + AT_rich Low_complexity Low_complexity 1 60 0 5458 153 31 45 chr2 189209052 189210221 -64046362 - L1MC1 LINE L1 -17 6316 5164 1772 279 49 22 chr2 189210222 189210859 -64045724 - L2 LINE L2 -1054 2260 1607 810 215 130 52 chr2 189211604 189211874 -64044709 + L1MC4 LINE L1 6763 7053 -989 1539 146 164 56 chr2 189211969 189212346 -64044237 - MSTB1 LTR MaLR -14 418 1 1655 247 75 61 chr2 189212346 189213165 -64043418 + L1MC4 LINE L1 7210 8039 -3 1161 201 71 7 chr2 189214858 189215152 -64041431 - MER33 DNA MER1_type -11 313 1 22 0 0 0 chr2 189215481 189215503 -64041080 + AT_rich Low_complexity Low_complexity 1 22 0 225 0 0 0 chr2 189216281 189216306 -64040277 + (T)n Simple_repeat Simple_repeat 1 25 0 246 248 71 4 chr2 189216981 189217078 -64039505 + L1ME LINE L1 5691 5758 -363 180 0 0 0 chr2 189219246 189219266 -64037317 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 342 359 10 0 chr2 189219928 189220031 -64036552 + MIR3 SINE MIR 63 166 -42 252 317 61 30 chr2 189220178 189220342 -64036241 - MIR SINE MIR -19 243 75 336 102 0 0 chr2 189220415 189220464 -64036119 + (CA)n Simple_repeat Simple_repeat 2 50 0 22 0 0 0 chr2 189220550 189220572 -64036011 + AT_rich Low_complexity Low_complexity 1 22 0 3693 257 120 40 chr2 189224192 189225807 -64030776 - L2 LINE L2 0 3313 1585 358 247 286 0 chr2 189225961 189226143 -64030440 - L2 LINE L2 -1724 1590 1357 1025 96 186 30 chr2 189227200 189227399 -64029184 + MER30 DNA MER1_type 1 230 0 180 0 0 0 chr2 189228212 189228232 -64028351 + (T)n Simple_repeat Simple_repeat 1 20 0 343 91 0 0 chr2 189228419 189228463 -64028120 + Tigger2 DNA MER2_type 4 47 -2671 580 119 136 0 chr2 189228577 189228695 -64027888 + Tigger2 DNA MER2_type 77 210 -2508 461 199 169 29 chr2 189228694 189228830 -64027753 + Tigger2 DNA MER2_type 2554 2708 -10 * 1658 155 17 21 chr2 189230815 189231106 -64025477 + AluJo SINE Alu 1 290 -22 252 86 0 0 chr2 189231334 189231369 -64025214 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 25 31 0 0 chr2 189231717 189231749 -64024834 + AT_rich Low_complexity Low_complexity 1 32 0 268 264 0 0 chr2 189232086 189232139 -64024444 + C-rich Low_complexity Low_complexity 3 55 0 1941 139 40 21 chr2 189234795 189235693 -64020890 + L1MA5 LINE L1 5291 6290 -10 206 32 32 0 chr2 189235729 189235760 -64020823 + (TA)n Simple_repeat Simple_repeat 2 33 0 303 221 78 0 chr2 189236069 189236146 -64020437 - MER5A DNA MER1_type -85 104 22 472 236 167 7 chr2 189236210 189236354 -64020229 - MER5A DNA MER1_type 0 189 23 22 35 0 0 chr2 189237204 189237233 -64019350 + AT_rich Low_complexity Low_complexity 1 29 0 265 381 22 15 chr2 189237819 189237953 -64018630 + L2 LINE L2 3123 3257 -15 558 252 21 14 chr2 189239362 189239505 -64017078 + MIR SINE MIR 63 206 -56 2294 86 3 3 chr2 189239521 189239823 -64016760 + AluY SINE Alu 3 304 -7 22 0 0 0 chr2 189239823 189239845 -64016738 + AT_rich Low_complexity Low_complexity 1 22 0 321 272 76 11 chr2 189241529 189241621 -64014962 - MIR SINE MIR -141 121 24 2206 113 0 6 chr2 189242037 189242348 -64014235 + AluSc SINE Alu 1 309 0 357 345 86 0 chr2 189242512 189242686 -64013897 + MER5A DNA MER1_type 1 189 0 21 0 0 0 chr2 189243668 189243689 -64012894 + AT_rich Low_complexity Low_complexity 1 21 0 189 313 181 14 chr2 189243880 189244024 -64012559 - L2 LINE L2 -176 3096 2929 30164 121 11 67 chr2 189244108 189249616 -64006967 + L1P LINE L1 13 5211 -935 1080 168 5 5 chr2 189249716 189249912 -64006671 + L1 LINE L1 4576 4771 -1375 1781 236 105 2 chr2 189250907 189251402 -64005181 + L1MC4 LINE L1 6473 7018 -1024 29 47 0 0 chr2 189251856 189251899 -64004684 + AT_rich Low_complexity Low_complexity 1 43 0 381 316 138 53 chr2 189252472 189252719 -64003864 + L2 LINE L2 2986 3253 -19 311 340 56 0 chr2 189252946 189253090 -64003493 + MIR SINE MIR 2 153 -109 181 0 33 33 chr2 189254152 189254182 -64002401 + (TTTTTG)n Simple_repeat Simple_repeat 1 30 0 236 339 87 67 chr2 189254932 189255649 -64000934 + L2 LINE L2 2575 3312 -1 600 235 80 21 chr2 189255973 189256160 -64000423 - MIR SINE MIR -9 253 56 4000 106 79 145 chr2 189258125 189259009 -63997574 - LTR12 LTR ERV1 0 826 1 520 252 58 42 chr2 189259065 189259378 -63997205 - pTR5 LTR ERV1 -1383 1055 738 21 0 0 0 chr2 189260318 189260339 -63996244 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr2 189260754 189260794 -63995789 + AT_rich Low_complexity Low_complexity 1 40 0 315 0 0 0 chr2 189261686 189261721 -63994862 + (CA)n Simple_repeat Simple_repeat 2 36 0 1629 201 31 0 chr2 189261721 189262040 -63994543 - MER2 DNA MER2_type -2 343 15 632 274 78 22 chr2 189262591 189262821 -63993762 + MIR SINE MIR 1 243 -19 255 252 219 16 chr2 189262984 189263107 -63993476 + MIR SINE MIR 65 212 -50 262 165 21 52 chr2 189263736 189263833 -63992750 + (TTATA)n Simple_repeat Simple_repeat 1 94 0 378 0 0 0 chr2 189264341 189264383 -63992200 + (CA)n Simple_repeat Simple_repeat 2 43 0 350 392 27 0 chr2 189264527 189264675 -63991908 - L2 LINE L2 -5 3267 3116 431 347 57 10 chr2 189266895 189267088 -63989495 + MIR SINE MIR 56 257 -5 28 0 0 0 chr2 189268053 189268081 -63988502 + AT_rich Low_complexity Low_complexity 1 28 0 1364 240 97 41 chr2 189268525 189269427 -63987156 - L1ME LINE L1 -842 1599 554 1125 249 56 76 chr2 189269428 189269930 -63986653 - MER77 LTR ERV1 -39 566 75 24 0 0 0 chr2 189269967 189269991 -63986592 + AT_rich Low_complexity Low_complexity 1 24 0 2070 176 50 21 chr2 189270069 189270489 -63986094 - MSTB1 LTR MaLR 0 432 1 323 274 47 28 chr2 189271380 189271486 -63985097 - MER96 DNA MER1_type? -65 110 3 306 200 53 53 chr2 189271493 189271568 -63985015 + MIR SINE MIR 58 132 -130 236 358 96 32 chr2 189272103 189272321 -63984262 + L3b LINE CR1 1344 1575 -8 27 0 0 0 chr2 189274124 189274151 -63982432 + AT_rich Low_complexity Low_complexity 1 27 0 314 127 51 8 chr2 189274281 189274399 -63982184 + (TA)n Simple_repeat Simple_repeat 2 124 0 490 82 75 0 chr2 189274417 189274563 -63982020 + (TA)n Simple_repeat Simple_repeat 1 157 0 677 201 14 14 chr2 189275674 189275813 -63980770 + MSTB1 LTR MaLR 294 432 0 1187 245 58 71 chr2 189276117 189276721 -63979862 - HAL1 LINE L1 -4 2503 1908 5319 204 17 59 chr2 189276733 189277346 -63979237 + L1 LINE L1 2973 3610 -2536 232 143 0 0 chr2 189277346 189277381 -63979202 + Alu SINE Alu 1 35 -268 1044 140 0 7 chr2 189277381 189277531 -63979052 + AluSg/x SINE Alu 131 279 -33 231 36 0 0 chr2 189277532 189277560 -63979023 + (GAAAA)n Simple_repeat Simple_repeat 3 30 0 5319 204 17 59 chr2 189277560 189278541 -63978042 + L1 LINE L1 3608 4570 -1576 940 176 0 0 chr2 189278543 189278696 -63977887 - L1P LINE L1 -5282 864 712 1644 270 43 23 chr2 189278756 189279401 -63977182 + L1MC1 LINE L1 3230 3887 -2259 3447 183 20 16 chr2 189279414 189280144 -63976439 + L1MC1 LINE L1 5200 5923 -410 2902 176 49 5 chr2 189280144 189280740 -63975843 + L1MD1 LINE L1 5610 6232 -10 210 89 36 18 chr2 189282265 189282321 -63974262 + (TTTAA)n Simple_repeat Simple_repeat 1 57 0 27 0 0 0 chr2 189282345 189282372 -63974211 + AT_rich Low_complexity Low_complexity 1 27 0 212 271 0 0 chr2 189282965 189283024 -63973559 + T-rich Low_complexity Low_complexity 1 59 0 188 254 0 14 chr2 189283029 189283100 -63973483 + CT-rich Low_complexity Low_complexity 4 73 0 247 93 0 37 chr2 189285142 189285196 -63971387 + (TTTTA)n Simple_repeat Simple_repeat 2 53 0 294 29 0 0 chr2 189286429 189286464 -63970119 + (TG)n Simple_repeat Simple_repeat 2 36 0 1912 158 0 3 chr2 189287640 189287937 -63968646 + AluSx SINE Alu 1 296 -16 325 257 40 69 chr2 189288006 189288107 -63968476 - L2 LINE L2 -4 3268 3171 361 307 216 0 chr2 189288156 189288309 -63968274 + MER5A DNA MER1_type 4 189 0 282 262 92 57 chr2 189288467 189288608 -63967975 - L2 LINE L2 -2691 623 478 1518 192 28 10 chr2 189289096 189289387 -63967196 - AluJb SINE Alu -15 297 2 260 281 36 50 chr2 189290291 189290430 -63966153 - MARNA DNA Mariner -206 380 244 1816 131 25 7 chr2 189290596 189290892 -63965691 + AluSx SINE Alu 9 312 0 24 77 0 0 chr2 189292017 189292069 -63964514 + AT_rich Low_complexity Low_complexity 1 52 0 2057 37 4 0 chr2 189292166 189292407 -63964176 + AluY SINE Alu 67 308 -3 276 30 0 0 chr2 189292591 189292624 -63963959 + (TG)n Simple_repeat Simple_repeat 2 34 0 458 252 161 26 chr2 189292754 189292909 -63963674 + MIR3 SINE MIR 19 194 -14 22 0 0 0 chr2 189293016 189293038 -63963545 + AT_rich Low_complexity Low_complexity 1 22 0 326 359 19 0 chr2 189293402 189293505 -63963078 + MIR3 SINE MIR 83 187 -21 283 248 152 76 chr2 189293604 189293802 -63962781 + L2 LINE L2 3101 3313 0 483 289 0 16 chr2 189297528 189297649 -63958934 - MIR SINE MIR -117 145 27 1113 92 37 0 chr2 189298086 189298250 -63958333 + MER30 DNA MER1_type 1 170 -60 195 313 36 0 chr2 189298997 189299080 -63957503 - MIR3 SINE MIR -2 206 121 181 400 56 16 chr2 189299291 189299416 -63957167 - L2 LINE L2 -4 3309 3180 192 391 75 12 chr2 189299795 189299956 -63956627 + MIR3 SINE MIR 24 194 -14 262 222 0 0 chr2 189300675 189300729 -63955854 - L2 LINE L2 -10 3303 3250 218 328 0 0 chr2 189301114 189301178 -63955405 + L2 LINE L2 2909 2972 -300 248 365 93 0 chr2 189301393 189301500 -63955083 + L2 LINE L2 3156 3272 0 33 25 0 0 chr2 189301570 189301610 -63954973 + AT_rich Low_complexity Low_complexity 1 40 0 452 92 63 29 chr2 189301610 189301784 -63954799 + (TA)n Simple_repeat Simple_repeat 1 180 0 529 78 84 0 chr2 189301802 189301968 -63954615 + (TA)n Simple_repeat Simple_repeat 1 180 0 29 28 0 0 chr2 189301968 189302004 -63954579 + AT_rich Low_complexity Low_complexity 1 36 0 1694 179 0 17 chr2 189353261 189353558 -63903025 - AluJo SINE Alu -20 292 1 453 307 59 38 chr2 189354356 189354594 -63901989 + MIR SINE MIR 5 247 -15 21 0 0 0 chr2 189354914 189354935 -63901648 + AT_rich Low_complexity Low_complexity 1 21 0 234 273 0 0 chr2 189355373 189355428 -63901155 + (TATG)n Simple_repeat Simple_repeat 2 56 0 301 321 30 48 chr2 189355735 189355903 -63900680 - L1ME LINE L1 -545 5576 5412 406 294 109 35 chr2 189355913 189356260 -63900323 - L1ME LINE L1 -758 5388 5016 325 272 20 48 chr2 189356324 189356471 -63900112 - L1ME LINE L1 -1527 4619 4477 222 37 0 0 chr2 189357069 189357096 -63899487 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 21 36 0 0 chr2 189358052 189358080 -63898503 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr2 189358613 189358643 -63897940 + AT_rich Low_complexity Low_complexity 1 30 0 631 300 45 21 chr2 189358647 189358890 -63897693 - MIR SINE MIR -12 250 2 21031 163 32 13 chr2 189359043 189363914 -63892669 + L1M1 LINE L1 10 4986 -2579 31 0 0 0 chr2 189364075 189364106 -63892477 + AT_rich Low_complexity Low_complexity 1 31 0 4942 62 43 0 chr2 189365379 189366026 -63890557 + L1PA7 LINE L1 5480 6154 0 27 0 0 0 chr2 189366034 189366061 -63890522 + AT_rich Low_complexity Low_complexity 1 27 0 526 327 80 55 chr2 189366508 189366982 -63889601 + L2 LINE L2 2149 2634 -680 399 41 0 0 chr2 189367384 189367433 -63889150 + (TG)n Simple_repeat Simple_repeat 2 50 0 2419 67 0 7 chr2 189368702 189368999 -63887584 + AluSc SINE Alu 1 295 -14 210 265 38 0 chr2 189369173 189369305 -63887278 + (TA)n Simple_repeat Simple_repeat 1 137 0 405 261 182 23 chr2 189369445 189369621 -63886962 - MIR SINE MIR -36 226 23 244 352 140 22 chr2 189370605 189370784 -63885799 - MIR SINE MIR -6 256 57 372 279 98 9 chr2 189372864 189373053 -63883530 + MIR SINE MIR 36 252 -10 2028 141 0 10 chr2 189373193 189373484 -63883099 - AluSx SINE Alu -24 288 1 227 278 0 0 chr2 189373501 189373555 -63883028 + L2 LINE L2 3215 3268 -4 546 199 133 72 chr2 189373945 189374111 -63882472 - MER5B DNA MER1_type -2 176 1 228 283 38 66 chr2 189374371 189374477 -63882106 + MIR SINE MIR 89 191 -71 21 57 0 0 chr2 189374601 189374636 -63881947 + AT_rich Low_complexity Low_complexity 1 35 0 316 256 212 0 chr2 189375671 189375808 -63880775 + MIR SINE MIR 92 257 -5 447 91 15 0 chr2 189375838 189375904 -63880679 + L1PA10 LINE L1 6088 6154 -14 375 257 40 68 chr2 189375927 189376075 -63880508 + L1M4c LINE L1 1719 1862 -4522 1552 131 88 54 chr2 189376442 189376739 -63879844 + AluJb SINE Alu 1 307 -5 232 208 0 65 chr2 189376897 189376974 -63879609 + L1MC4 LINE L1 6643 6714 -1328 845 222 5 15 chr2 189377086 189377289 -63879294 + MER3 DNA MER1_type 1 201 -8 216 273 130 0 chr2 189377292 189377369 -63879214 + L2 LINE L2 3143 3229 -43 1467 126 126 54 chr2 189378304 189378582 -63878001 - AluSx SINE Alu -14 298 1 278 284 224 0 chr2 189378941 189379124 -63877459 - L1ME LINE L1 -517 5604 5381 2320 99 0 3 chr2 189379157 189379460 -63877123 - AluSg SINE Alu -8 302 1 377 308 81 58 chr2 189380597 189381162 -63875421 - L1ME LINE L1 -904 5242 4665 23 0 0 0 chr2 189381197 189381220 -63875363 + AT_rich Low_complexity Low_complexity 1 23 0 188 67 33 0 chr2 189381822 189381852 -63874731 + (TATG)n Simple_repeat Simple_repeat 2 32 0 570 205 0 106 chr2 189383841 189383992 -63872591 + MSTD LTR MaLR 1 135 -293 674 167 42 8 chr2 189384032 189384152 -63872431 + FLAM_A SINE Alu 1 124 -18 925 173 82 53 chr2 189384153 189384295 -63872288 + MSTD LTR MaLR 183 334 -62 2331 67 3 3 chr2 189384295 189384594 -63871989 - AluY SINE Alu -12 299 1 925 173 82 53 chr2 189384594 189384659 -63871924 + MSTD LTR MaLR 334 396 0 781 270 38 35 chr2 189384982 189385418 -63871165 - LTR33A LTR ERVL 0 523 3 206 333 24 0 chr2 189385976 189386060 -63870523 - MIR SINE MIR -176 86 1 406 213 139 25 chr2 189386316 189386438 -63870145 + MIR SINE MIR 123 258 -4 23 0 0 0 chr2 189389078 189389101 -63867482 + AT_rich Low_complexity Low_complexity 1 23 0 245 369 108 0 chr2 189389235 189389365 -63867218 + MIR SINE MIR 20 163 -99 270 262 12 24 chr2 189389377 189389461 -63867122 - L2 LINE L2 0 3313 3231 23 0 0 0 chr2 189389627 189389650 -63866933 + AT_rich Low_complexity Low_complexity 1 23 0 398 302 94 19 chr2 189392034 189392193 -63864390 + MIR3 SINE MIR 37 207 -1 23 33 0 0 chr2 189392210 189392240 -63864343 + AT_rich Low_complexity Low_complexity 1 30 0 23 54 0 0 chr2 189392279 189392316 -63864267 + AT_rich Low_complexity Low_complexity 1 37 0 549 240 26 0 chr2 189392811 189392965 -63863618 - L1M4 LINE L1 -3139 3007 2850 2945 262 61 11 chr2 189392971 189393974 -63862609 - L1ME LINE L1 -1564 4582 3530 24 77 0 0 chr2 189395006 189395058 -63861525 + AT_rich Low_complexity Low_complexity 1 52 0 773 289 169 43 chr2 189395088 189395549 -63861034 + MLT1G LTR MaLR 72 590 0 335 252 160 23 chr2 189395861 189395992 -63860591 + MIR SINE MIR 13 161 -101 363 23 0 0 chr2 189396277 189396321 -63860262 + (TG)n Simple_repeat Simple_repeat 2 45 0 282 218 46 35 chr2 189396445 189396532 -63860051 + L2 LINE L2 3172 3259 -54 2257 107 0 0 chr2 189397225 189397525 -63859058 + AluY SINE Alu 1 300 -11 2042 145 119 13 chr2 189397665 189398052 -63858531 + MSTA LTR MaLR 1 428 0 286 213 12 50 chr2 189398287 189398367 -63858216 + MIR SINE MIR 84 160 -102 493 336 29 0 chr2 189398377 189398618 -63857965 - L1MC4 LINE L1 -3 8039 7792 1088 289 161 22 chr2 189398708 189399468 -63857115 + MER69 DNA AcHobo 1 935 -1591 259 256 24 24 chr2 189399482 189399564 -63857019 + L1MC4 LINE L1 7924 8005 -37 554 252 26 104 chr2 189399641 189399950 -63856633 + MER69 DNA AcHobo 975 1259 -1267 778 191 135 85 chr2 189399954 189400295 -63856288 + MER69 DNA AcHobo 2119 2476 -50 197 321 123 49 chr2 189400426 189400588 -63855995 - MIR3 SINE MIR -14 194 21 276 30 0 0 chr2 189401203 189401236 -63855347 + (CA)n Simple_repeat Simple_repeat 2 34 0 1168 221 114 37 chr2 189401247 189401606 -63854977 - MLT2B1 LTR ERVL -48 366 1 359 302 150 43 chr2 189401650 189402091 -63854492 - LTR16C LTR ERVL -3 488 1 241 285 93 40 chr2 189402139 189402290 -63854293 - MIR SINE MIR -28 234 76 2475 113 17 11 chr2 189402385 189402747 -63853836 - THE1B LTR MaLR 0 364 1 2211 126 3 0 chr2 189404364 189404674 -63851909 + AluSq SINE Alu 1 311 -2 6888 137 45 7 chr2 189404719 189405905 -63850678 + Tigger3b DNA MER2_type 1 1231 0 21 0 0 0 chr2 189407165 189407186 -63849397 + GC_rich Low_complexity Low_complexity 1 21 0 232 253 16 44 chr2 189407372 189407554 -63849029 + (GGGTG)n Simple_repeat Simple_repeat 1 177 0 * 346 230 11 53 chr2 189407420 189407607 -63848976 + G-rich Low_complexity Low_complexity 1 179 0 396 55 0 0 chr2 189407763 189407818 -63848765 + (TA)n Simple_repeat Simple_repeat 2 56 0 378 0 0 0 chr2 189407817 189407859 -63848724 + (GA)n Simple_repeat Simple_repeat 2 43 0 * 603 0 0 0 chr2 189408677 189408744 -63847839 + (CCCTAA)n Simple_repeat Simple_repeat 3 69 0 743 285 59 22 chr2 189408745 189409015 -63847568 + MLT2F LTR ERVL 76 355 -308 294 95 0 0 chr2 189409709 189409751 -63846832 + (A)n Simple_repeat Simple_repeat 1 42 0 202 257 19 0 chr2 189410096 189410201 -63846382 + CT-rich Low_complexity Low_complexity 2 108 0 2438 50 0 3 chr2 189410526 189410828 -63845755 - AluY SINE Alu -10 301 1 1540 180 21 3 chr2 189411047 189411331 -63845252 + AluJb SINE Alu 1 289 -23 239 321 0 127 chr2 189411642 189411776 -63844807 - MIR3 SINE MIR -5 203 87 1239 72 0 0 chr2 189412448 189412615 -63843968 + (TTTC)n Simple_repeat Simple_repeat 2 168 0 628 278 41 21 chr2 189414637 189414928 -63841655 + L1ME LINE L1 5523 5819 -302 356 290 130 0 chr2 189414972 189415110 -63841473 - MIR SINE MIR -1 261 106 1175 188 63 7 chr2 189415435 189415659 -63840924 + MER33 DNA MER1_type 1 248 -2337 2023 135 0 13 chr2 189415659 189415963 -63840620 + AluSq SINE Alu 1 300 -13 1175 188 63 7 chr2 189415963 189416041 -63840542 + MER33 DNA MER1_type 248 320 -4 435 289 33 67 chr2 189416112 189416292 -63840291 - MER5B DNA MER1_type -4 174 1 261 338 25 0 chr2 189417246 189417326 -63839257 + L2 LINE L2 3192 3273 -40 815 196 22 39 chr2 189417330 189417509 -63839074 - AluJb SINE Alu -17 295 120 35 24 0 0 chr2 189417674 189417716 -63838867 + AT_rich Low_complexity Low_complexity 1 42 0 513 328 22 31 chr2 189418736 189418967 -63837616 + MIR SINE MIR 33 259 -3 303 343 28 0 chr2 189419246 189419354 -63837229 - MIR SINE MIR -46 216 106 21 57 0 0 chr2 189419948 189419983 -63836600 + AT_rich Low_complexity Low_complexity 1 35 0 505 295 71 68 chr2 189421477 189421670 -63834913 - L1MEc LINE L1 -3427 2788 2597 354 45 0 0 chr2 189421670 189421714 -63834869 + (CTCA)n Simple_repeat Simple_repeat 1 44 0 505 295 71 68 chr2 189421714 189422182 -63834401 - L1MEc LINE L1 -3618 2597 2148 254 332 88 10 chr2 189422371 189422564 -63834019 + L2 LINE L2 1610 1817 -1497 593 300 78 46 chr2 189422565 189422935 -63833648 + L2 LINE L2 2008 2389 -925 1707 281 115 14 chr2 189422942 189423636 -63832947 - L2 LINE L2 -417 2897 2134 269 200 33 17 chr2 189424265 189424325 -63832258 - MIR SINE MIR -131 131 71 352 356 76 48 chr2 189424794 189425148 -63831435 + L2 LINE L2 2897 3260 -12 284 285 161 9 chr2 189427505 189427673 -63828910 + MIR SINE MIR 50 241 -21 4140 205 34 17 chr2 189427859 189429080 -63827503 + L1P4 LINE L1 4335 5571 -590 210 246 33 33 chr2 189430500 189430561 -63826022 + MIR SINE MIR 69 129 -133 461 348 83 21 chr2 189430629 189431003 -63825580 - L2 LINE L2 -444 2870 2474 2116 160 81 5 chr2 189432061 189432455 -63824128 - MSTA LTR MaLR 0 428 5 333 333 61 27 chr2 189432691 189432838 -63823745 + MIR SINE MIR 10 161 -101 230 62 0 0 chr2 189433895 189433927 -63822656 - L1P LINE L1 -1356 4790 4759 5497 231 56 20 chr2 189433934 189434494 -63822089 - L1P LINE L1 -1519 4627 4089 2016 110 28 0 chr2 189434494 189434826 -63821757 - AluSc SINE Alu 0 309 1 5497 231 56 20 chr2 189434826 189435797 -63820786 - L1P LINE L1 -2057 4089 3040 2240 141 77 10 chr2 189435797 189436214 -63820369 + L1PA16 LINE L1 5720 6165 -1 21 36 0 0 chr2 189436465 189436493 -63820090 + AT_rich Low_complexity Low_complexity 1 28 0 267 270 46 72 chr2 189436672 189436824 -63819759 + MER5A DNA MER1_type 12 159 -30 255 61 35 70 chr2 189438785 189438899 -63817684 + (TTATA)n Simple_repeat Simple_repeat 4 113 0 5854 92 35 14 chr2 189439040 189439928 -63816655 + L1PA14 LINE L1 5254 6160 -1 1261 187 9 22 chr2 189440794 189441024 -63815559 - MSTD LTR MaLR -169 227 1 339 220 197 8 chr2 189442821 189442953 -63813630 - HAL1 LINE L1 -592 1915 1759 244 270 174 9 chr2 189443078 189443193 -63813390 - HAL1 LINE L1 -2115 392 259 2052 95 76 84 chr2 189443961 189444341 -63812242 - MER51B LTR ERV1 0 377 1 941 232 0 0 chr2 189444498 189444679 -63811904 - AluJo SINE Alu -31 281 101 22 0 0 0 chr2 189445255 189445277 -63811306 + AT_rich Low_complexity Low_complexity 1 22 0 1564 209 3 3 chr2 189445637 189445943 -63810640 - AluJo SINE Alu -4 308 3 962 140 0 0 chr2 189445944 189446080 -63810503 - AluJo SINE Alu -176 136 1 189 0 0 0 chr2 189446916 189446937 -63809646 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2168 110 0 0 chr2 189446940 189447231 -63809352 - AluSg SINE Alu -18 292 2 541 353 160 20 chr2 189447862 189448350 -63808233 + L2 LINE L2 2316 2871 -443 241 324 83 48 chr2 189448601 189448746 -63807837 + L2 LINE L2 3164 3313 0 208 279 0 70 chr2 189448930 189449016 -63807567 - MIR SINE MIR -1 261 182 * 466 271 65 47 chr2 189449007 189449177 -63807406 + L2 LINE L2 2431 2603 -711 2954 233 81 37 chr2 189449191 189450373 -63806210 - L1ME1 LINE L1 -5 6161 4930 494 272 92 80 chr2 189451612 189451961 -63804622 + MLT1H LTR MaLR 12 364 -185 187 340 142 9 chr2 189452051 189452157 -63804426 + L2 LINE L2 3186 3305 -8 478 389 46 39 chr2 189452743 189453154 -63803429 - L2 LINE L2 -1 3271 2858 367 172 126 0 chr2 189453241 189453328 -63803255 + L1PA16 LINE L1 6052 6149 -17 22 35 0 0 chr2 189453791 189453820 -63802763 + AT_rich Low_complexity Low_complexity 1 29 0 284 122 0 0 chr2 189454594 189454643 -63801940 + L1MC1 LINE L1 6272 6320 -13 2295 64 3 0 chr2 189454707 189455036 -63801547 - AluY SINE Alu 0 330 1 1783 171 98 0 chr2 189455440 189455768 -63800815 + L1MC1 LINE L1 5436 5795 -538 7654 20 2 0 chr2 189455768 189457391 -63799192 + L1PA3 LINE L1 4531 6155 0 21 0 0 0 chr2 189457417 189457438 -63799145 + AT_rich Low_complexity Low_complexity 1 21 0 2476 172 26 41 chr2 189457445 189457985 -63798598 + L1MC1 LINE L1 5789 6320 -13 21 0 0 0 chr2 189459025 189459046 -63797537 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr2 189459312 189459333 -63797250 + (TAA)n Simple_repeat Simple_repeat 2 22 0 24 0 0 0 chr2 189459784 189459808 -63796775 + AT_rich Low_complexity Low_complexity 1 24 0 1293 164 82 39 chr2 189459878 189460143 -63796440 + AluJb SINE Alu 1 289 -13 351 21 0 21 chr2 189460143 189460191 -63796392 + (TAAA)n Simple_repeat Simple_repeat 2 180 0 1293 164 82 39 chr2 189460191 189460206 -63796377 + AluJb SINE Alu 289 302 0 184 335 69 73 chr2 189460890 189461123 -63795460 + L2 LINE L2 3013 3244 -69 408 244 12 0 chr2 189461190 189461272 -63795311 + L2 LINE L2 3225 3307 -6 243 170 0 0 chr2 189461872 189461919 -63794664 + CT-rich Low_complexity Low_complexity 1 47 0 287 277 23 165 chr2 189461935 189462328 -63794255 - L2 LINE L2 -10 3262 2926 509 234 28 0 chr2 189463610 189463717 -63792866 - MER5A DNA MER1_type 0 189 80 232 274 0 0 chr2 189463743 189463794 -63792789 + L2 LINE L2 2766 2816 -498 421 285 184 13 chr2 189463811 189463969 -63792614 + MIR SINE MIR 15 199 -63 279 299 246 23 chr2 189464149 189464413 -63792170 + L2 LINE L2 2950 3272 0 291 283 172 22 chr2 189464776 189464956 -63791627 + MIR SINE MIR 8 214 -48 302 335 90 19 chr2 189465563 189465718 -63790865 + L2 LINE L2 3102 3267 -5 23 0 0 0 chr2 189466594 189466617 -63789966 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr2 189466684 189466713 -63789870 + AT_rich Low_complexity Low_complexity 1 29 0 1623 152 36 0 chr2 189467676 189467978 -63788605 - L1MA9 LINE L1 -237 6075 5763 878 205 33 14 chr2 189467975 189468185 -63788398 + L1MA9 LINE L1 6077 6290 -22 * 279 0 0 0 chr2 189469386 189469417 -63787166 + (TTA)n Simple_repeat Simple_repeat 3 33 0 22 0 0 0 chr2 189470240 189470262 -63786321 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 189470522 189470550 -63786033 + AT_rich Low_complexity Low_complexity 1 28 0 237 91 0 68 chr2 189470979 189471023 -63785560 - MADE1 DNA Mariner 0 80 40 2919 180 26 4 chr2 189471778 189472316 -63784267 - MER44D DNA MER2_type 0 605 1 197 59 59 0 chr2 189472501 189472535 -63784048 + T-rich Low_complexity Low_complexity 2 37 0 2025 59 0 8 chr2 189473229 189473511 -63783072 - AluY SINE Alu 0 311 32 29 28 0 0 chr2 189473935 189473971 -63782612 + AT_rich Low_complexity Low_complexity 1 36 0 29 0 0 0 chr2 189473997 189474026 -63782557 + AT_rich Low_complexity Low_complexity 1 29 0 271 287 127 47 chr2 189474800 189474880 -63781703 + MER5B DNA MER1_type 15 87 -91 2337 82 0 0 chr2 189474880 189475174 -63781409 - AluY SINE Alu -17 294 1 271 287 127 47 chr2 189475174 189475243 -63781340 + MER5B DNA MER1_type 87 176 -2 343 289 96 0 chr2 189475803 189475907 -63780676 - MLT1F LTR MaLR -130 412 299 269 391 47 26 chr2 189476218 189476410 -63780173 - L2 LINE L2 -208 3064 2869 896 314 24 18 chr2 189476503 189476837 -63779746 + MLT1I LTR MaLR 74 409 0 313 263 285 15 chr2 189477471 189477608 -63778975 + MIR SINE MIR 3 176 -86 252 77 0 0 chr2 189477613 189477652 -63778931 + (CA)n Simple_repeat Simple_repeat 2 40 0 7396 123 27 30 chr2 189477653 189478887 -63777696 + Tigger3b DNA MER2_type 2 1231 0 22 0 0 0 chr2 189478894 189478916 -63777667 + AT_rich Low_complexity Low_complexity 1 22 0 306 0 0 0 chr2 189478916 189478950 -63777633 + (CA)n Simple_repeat Simple_repeat 2 35 0 1171 283 78 25 chr2 189479184 189479661 -63776922 - MLT1J LTR MaLR -2 509 8 357 362 51 62 chr2 189482746 189483194 -63773389 + L2 LINE L2 2824 3266 -6 308 295 45 18 chr2 189483390 189483502 -63773081 - L2 LINE L2 0 3313 3199 2191 118 0 0 chr2 189483880 189484177 -63772406 + AluSx SINE Alu 2 298 -14 285 29 0 0 chr2 189484178 189484212 -63772371 + (TA)n Simple_repeat Simple_repeat 2 35 0 360 291 97 18 chr2 189485308 189485473 -63771110 - MIR3 SINE MIR -15 193 16 24 0 0 0 chr2 189485831 189485855 -63770728 + AT_rich Low_complexity Low_complexity 1 24 0 1233 274 81 16 chr2 189486892 189487508 -63769075 - L1ME4a LINE L1 -45 6076 5421 315 200 47 0 chr2 189489348 189489433 -63767150 - L1ME4a LINE L1 -63 6058 5970 491 221 127 17 chr2 189489565 189489746 -63766837 - L1ME4a LINE L1 -359 5762 5562 1788 119 82 0 chr2 189491700 189491969 -63764614 + AluSx SINE Alu 1 291 -21 1712 151 0 73 chr2 189492644 189492961 -63763622 + AluJo SINE Alu 12 305 -7 3961 224 72 52 chr2 189493177 189494415 -63762168 + L1MB7 LINE L1 1 1262 -5280 2272 237 31 21 chr2 189494408 189495054 -63761529 - L1M4c LINE L1 -4090 1292 1032 * 6631 210 43 22 chr2 189495061 189497731 -63758852 + L1MB7 LINE L1 3935 6663 -19 1368 216 33 77 chr2 189498464 189498946 -63757637 + LTR37B LTR ERV1 1 461 -7 24 0 0 0 chr2 189500099 189500123 -63756460 + AT_rich Low_complexity Low_complexity 1 24 0 229 336 86 23 chr2 189500642 189500770 -63755813 + MIR3 SINE MIR 8 143 -65 192 257 57 57 chr2 189501615 189501685 -63754898 + MIR SINE MIR 92 161 -101 831 253 60 30 chr2 189502009 189502274 -63754309 - MLT1G1 LTR MaLR -318 277 5 30 45 0 0 chr2 189502740 189502784 -63753799 + AT_rich Low_complexity Low_complexity 1 44 0 434 260 204 13 chr2 189503120 189503355 -63753228 + L2 LINE L2 2169 2448 -866 2341 79 0 3 chr2 189503439 189503744 -63752839 + AluY SINE Alu 1 304 -7 180 0 0 0 chr2 189503850 189503870 -63752713 + (A)n Simple_repeat Simple_repeat 1 20 0 23 0 0 0 chr2 189503901 189503924 -63752659 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 189504139 189504167 -63752416 + AT_rich Low_complexity Low_complexity 1 28 0 845 288 59 55 chr2 189504339 189504811 -63751772 + LTR33 LTR ERVL 48 521 0 398 314 25 16 chr2 189505576 189505697 -63750886 + MIR SINE MIR 20 141 -121 246 292 17 67 chr2 189506692 189506812 -63749771 - L2 LINE L2 -40 3273 3160 192 40 0 0 chr2 189508234 189508259 -63748324 + (A)n Simple_repeat Simple_repeat 1 25 0 1626 219 135 15 chr2 189508632 189509112 -63747471 - MLT1F LTR MaLR -2 540 3 180 77 0 0 chr2 189509253 189509279 -63747304 + (TTTTTA)n Simple_repeat Simple_repeat 6 31 0 1791 164 27 0 chr2 189510234 189510357 -63746226 + AluSx SINE Alu 1 119 -193 438 20 0 0 chr2 189510357 189510408 -63746175 + (CA)n Simple_repeat Simple_repeat 2 52 0 1791 164 27 0 chr2 189510408 189510582 -63746001 + AluSx SINE Alu 119 306 -6 21 36 0 0 chr2 189511069 189511097 -63745486 + AT_rich Low_complexity Low_complexity 1 28 0 2334 100 0 10 chr2 189511168 189511477 -63745106 + AluSx SINE Alu 1 306 -6 259 264 11 46 chr2 189512515 189512602 -63743981 + L2 LINE L2 3188 3271 -1 947 239 82 26 chr2 189512947 189513253 -63743330 + MER5C DNA MER1_type 2 324 0 198 191 0 0 chr2 189516089 189516136 -63740447 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 679 256 60 0 chr2 189516583 189516782 -63739801 - MIR SINE MIR -44 218 8 2849 79 16 3 chr2 189517322 189517701 -63738882 - MLT2A2 LTR ERVL -69 384 1 221 204 0 41 chr2 189517707 189517756 -63738827 + L2 LINE L2 3264 3310 -3 296 286 19 0 chr2 189518017 189518122 -63738461 + (TA)n Simple_repeat Simple_repeat 1 107 0 668 365 163 18 chr2 189518971 189519453 -63737130 + L2 LINE L2 750 1161 -2153 2372 83 0 3 chr2 189519453 189519765 -63736818 - AluY SINE Alu 0 311 1 668 365 163 18 chr2 189519765 189520297 -63736286 + L2 LINE L2 1161 1911 -1403 26045 133 10 25 chr2 189520377 189526853 -63729730 + L1PA8A LINE L1 2 6446 0 709 336 131 19 chr2 189526883 189527365 -63729218 - L2 LINE L2 -846 2468 1933 346 313 103 41 chr2 189527392 189527587 -63728996 + LTR33 LTR ERVL 1 207 -314 512 354 113 16 chr2 189527814 189528425 -63728158 + L2 LINE L2 2554 3224 -48 2448 88 0 0 chr2 189528437 189528744 -63727839 - AluY SINE Alu -4 307 1 273 353 134 32 chr2 189528889 189529232 -63727351 - L2 LINE L2 -541 2773 2396 22 0 0 0 chr2 189529715 189529737 -63726846 + AT_rich Low_complexity Low_complexity 1 22 0 1029 242 48 29 chr2 189531329 189531721 -63724862 + MLT1C LTR MaLR 1 467 0 477 214 21 21 chr2 189532326 189532471 -63724112 + L1MB8 LINE L1 6033 6177 -1 409 271 36 57 chr2 189533876 189534068 -63722515 + MIR SINE MIR 32 219 -43 1037 295 120 5 chr2 189534665 189535053 -63721530 + LTR33 LTR ERVL 20 452 -69 3717 170 52 6 chr2 189535053 189535743 -63720840 + MER50 LTR ERV1 1 722 -12 2763 10 0 0 chr2 189536970 189537270 -63719313 + AluY SINE Alu 1 300 -11 429 196 42 142 chr2 189538391 189538631 -63717952 + MER112 DNA MER1_type 33 248 -12 436 291 77 90 chr2 189539598 189539830 -63716753 - MLT1J LTR MaLR -74 437 212 3877 105 69 2 chr2 189539830 189540423 -63716160 - MER41B LTR ERV1 -2 633 1 436 291 77 90 chr2 189540423 189540633 -63715950 - MLT1J LTR MaLR -299 212 1 5987 83 7 7 chr2 189541568 189542640 -63713943 - L1PB2 LINE L1 -2 6149 5095 750 319 190 21 chr2 189542832 189543219 -63713364 - L2 LINE L2 -1 3312 2992 2514 92 0 67 chr2 189543219 189543609 -63712974 + THE1B LTR MaLR 1 364 0 750 319 190 21 chr2 189543609 189543860 -63712723 - L2 LINE L2 -321 2992 2558 6473 190 18 39 chr2 189544003 189546024 -63710559 + L1PB4 LINE L1 3818 5791 -365 24 67 0 0 chr2 189546024 189546069 -63710514 + AT_rich Low_complexity Low_complexity 1 45 0 241 80 20 20 chr2 189546074 189546124 -63710459 + (TA)n Simple_repeat Simple_repeat 2 51 0 1868 191 14 3 chr2 189546181 189546552 -63710031 + L1PB4 LINE L1 5782 6156 0 180 111 0 0 chr2 189547341 189547368 -63709215 + (TCC)n Simple_repeat Simple_repeat 1 27 0 671 209 170 0 chr2 189547835 189547988 -63708595 + MER5A DNA MER1_type 11 189 0 436 306 149 40 chr2 189549307 189549811 -63706772 + L2 LINE L2 1930 2488 -826 254 297 97 28 chr2 189550254 189550399 -63706184 + L2 LINE L2 3159 3313 0 1641 164 61 0 chr2 189552249 189552529 -63704054 - AluJb SINE Alu -11 301 5 23 0 0 0 chr2 189553412 189553435 -63703148 + AT_rich Low_complexity Low_complexity 1 23 0 207 139 0 0 chr2 189553992 189554028 -63702555 + (GAAA)n Simple_repeat Simple_repeat 1 36 0 273 250 111 0 chr2 189555214 189555286 -63701297 + L2 LINE L2 3193 3272 0 201 295 26 26 chr2 189555475 189555553 -63701030 - MIR SINE MIR -13 249 172 280 151 65 22 chr2 189556004 189556249 -63700334 + AluSx SINE Alu 1 298 -2 21 0 0 0 chr2 189556328 189556349 -63700234 + AT_rich Low_complexity Low_complexity 1 21 0 1343 331 72 36 chr2 189557169 189558203 -63698380 - L2 LINE L2 -7 3306 2227 16738 39 2 0 chr2 189558312 189561116 -63695467 - L1PA5 LINE L1 -2 6152 3343 351 169 45 0 chr2 189561435 189561524 -63695059 - L1MB3 LINE L1 0 6183 6091 5935 140 16 129 chr2 189561533 189563950 -63692633 - L1MA4 LINE L1 -280 6020 3864 445 317 77 5 chr2 189563956 189564177 -63692406 - L2 LINE L2 -1092 2222 1986 200 375 29 19 chr2 189564248 189564352 -63692231 + L2 LINE L2 3203 3307 -6 276 314 54 54 chr2 189568658 189568843 -63687740 - MIR SINE MIR -54 208 24 333 0 0 0 chr2 189570139 189570176 -63686407 + (TG)n Simple_repeat Simple_repeat 1 37 0 198 250 54 0 chr2 189570238 189570294 -63686289 + MIR SINE MIR 204 262 0 1010 136 98 76 chr2 189571367 189571683 -63684900 + MER33 DNA MER1_type 2 324 0 275 358 22 56 chr2 189572589 189572768 -63683815 - L2 LINE L2 -204 3068 2896 838 337 83 43 chr2 189572848 189573481 -63683102 - L2 LINE L2 -544 2770 2091 459 259 84 18 chr2 189573481 189573647 -63682936 + MER5B DNA MER1_type 2 178 0 838 337 83 43 chr2 189573647 189573879 -63682704 - L2 LINE L2 -1223 2091 1870 217 242 0 16 chr2 189574944 189575006 -63681577 + CT-rich Low_complexity Low_complexity 1 61 0 750 209 52 47 chr2 189575366 189575577 -63681006 + MIR SINE MIR 49 260 -2 223 121 0 0 chr2 189576461 189576494 -63680089 - L2 LINE L2 -18 3295 3263 322 378 70 0 chr2 189577368 189577511 -63679072 + MIR SINE MIR 53 205 -57 199 226 104 94 chr2 189577620 189577726 -63678857 - MIR SINE MIR 0 262 156 299 253 61 40 chr2 189578009 189578108 -63678475 - L2 LINE L2 -17 3296 3196 346 122 0 0 chr2 189578905 189578954 -63677629 - MER30 DNA MER1_type -31 199 151 5811 37 1 1 chr2 189578954 189579650 -63676933 + L1PA5 LINE L1 5459 6154 0 1009 162 27 5 chr2 189579653 189579838 -63676745 + L1M2 LINE L1 5492 5680 -611 776 122 99 0 chr2 189579840 189579971 -63676612 - MER30 DNA MER1_type -86 144 1 484 337 0 23 chr2 189579991 189580163 -63676420 + MER5B DNA MER1_type 6 173 -5 927 189 0 18 chr2 189580301 189580470 -63676113 + FRAM SINE Alu 1 166 0 224 299 0 26 chr2 189582353 189582430 -63674153 + CT-rich Low_complexity Low_complexity 1 75 0 263 312 80 40 chr2 189582499 189582624 -63673959 - MER117 DNA MER1_type -38 159 30 2042 137 27 3 chr2 189582707 189583036 -63673547 + MER1B DNA MER1_type 1 337 0 643 216 15 8 chr2 189583260 189583394 -63673189 + AluJo SINE Alu 3 137 -175 2740 134 2 12 chr2 189586264 189586696 -63669887 + L1PA15 LINE L1 5717 6144 -21 4733 166 61 26 chr2 189586705 189588020 -63668563 + L1MA9 LINE L1 4908 6272 -40 270 254 0 14 chr2 189590160 189590231 -63666352 - MIR SINE MIR -14 248 179 22 0 0 0 chr2 189592590 189592612 -63663971 + AT_rich Low_complexity Low_complexity 1 22 0 331 275 94 23 chr2 189593658 189593829 -63662754 + L2 LINE L2 3126 3308 -5 283 252 43 115 chr2 189595045 189595184 -63661399 + L2 LINE L2 3140 3268 -4 355 260 68 51 chr2 189595780 189595957 -63660626 - MER104 DNA MER2_type 0 180 1 2298 98 3 3 chr2 189598123 189598430 -63658153 - AluY SINE Alu -4 307 1 712 236 17 6 chr2 189599234 189599408 -63657175 - L1PB4 LINE L1 -9 6147 5972 1913 175 73 32 chr2 189599413 189599854 -63656729 - LTR2B LTR ERV1 0 490 32 819 169 5 60 chr2 189599873 189600057 -63656526 - L1PB4 LINE L1 -186 5970 5797 444 19 0 0 chr2 189600057 189600110 -63656473 + (TG)n Simple_repeat Simple_repeat 1 53 0 760 265 63 0 chr2 189600204 189600427 -63656156 + MIR SINE MIR 20 256 -6 2676 29 3 0 chr2 189600829 189601137 -63655446 + AluY SINE Alu 2 310 -1 180 176 0 0 chr2 189601320 189601354 -63655229 + CT-rich Low_complexity Low_complexity 3 36 0 480 351 159 8 chr2 189601400 189601753 -63654830 + L2 LINE L2 2867 3272 0 636 270 97 18 chr2 189602447 189602673 -63653910 - MIR SINE MIR -17 245 2 648 223 0 8 chr2 189603898 189604019 -63652564 + FLAM_A SINE Alu 1 120 -13 748 173 69 52 chr2 189605861 189606034 -63650549 + AluJb SINE Alu 136 311 -1 212 179 0 0 chr2 189607424 189607463 -63649120 + T-rich Low_complexity Low_complexity 1 39 0 24 32 0 0 chr2 189607898 189607929 -63648654 + AT_rich Low_complexity Low_complexity 1 31 0 902 273 60 42 chr2 189610323 189610657 -63645926 - L2 LINE L2 -1 3312 2973 621 222 150 18 chr2 189610657 189610824 -63645759 - MER5A DNA MER1_type 0 189 1 4654 276 149 9 chr2 189610829 189612667 -63643916 - L2 LINE L2 -338 2976 882 207 0 0 0 chr2 189613138 189613161 -63643422 + (T)n Simple_repeat Simple_repeat 1 23 0 249 331 74 0 chr2 189614211 189614332 -63642251 + L2 LINE L2 3184 3313 0 595 274 14 62 chr2 189615901 189616109 -63640474 - MIR SINE MIR -54 208 11 2013 170 9 0 chr2 189617109 189617450 -63639133 + MER2 DNA MER2_type 1 344 -1 1887 151 7 0 chr2 189617986 189618271 -63638312 + AluSx SINE Alu 1 287 -25 207 0 0 0 chr2 189618275 189618298 -63638285 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 205 158 0 0 chr2 189618420 189618433 -63638150 + A-rich Low_complexity Low_complexity 1 13 -25 1624 171 36 13 chr2 189618433 189618738 -63637845 + AluJo SINE Alu 1 312 0 205 158 0 0 chr2 189618738 189618762 -63637821 + A-rich Low_complexity Low_complexity 12 38 0 205 218 73 18 chr2 189620117 189620172 -63636411 - L3 LINE CR1 -8 1569 1512 21 0 0 0 chr2 189621204 189621225 -63635358 + AT_rich Low_complexity Low_complexity 1 21 0 232 261 0 0 chr2 189621630 189621676 -63634907 + MIR SINE MIR 211 256 -6 200 324 175 28 chr2 189622558 189622913 -63633670 + L2 LINE L2 1932 2338 -976 194 441 34 0 chr2 189622950 189623129 -63633454 + L2 LINE L2 2432 2616 -698 370 298 174 26 chr2 189623339 189623604 -63632979 + L2 LINE L2 2968 3271 -1 320 260 90 34 chr2 189624553 189624730 -63631853 + MER5A DNA MER1_type 3 189 0 552 276 84 29 chr2 189624732 189624971 -63631612 + MIR SINE MIR 11 262 0 442 256 54 8 chr2 189625836 189625965 -63630618 - MLT1L LTR MaLR 0 615 481 308 221 40 107 chr2 189626252 189626401 -63630182 - MLT1L LTR MaLR -475 140 2 689 229 167 5 chr2 189628145 189628337 -63628246 - MER58A DNA MER1_type 0 224 2 27 0 0 0 chr2 189628377 189628404 -63628179 + AT_rich Low_complexity Low_complexity 1 27 0 1122 259 82 21 chr2 189628608 189629036 -63627547 + L1ME3A LINE L1 5717 6170 0 242 298 149 39 chr2 189629946 189630154 -63626429 - L2 LINE L2 -481 2833 2603 181 303 66 13 chr2 189631030 189631106 -63625477 - MIR SINE MIR -78 130 51 331 225 32 10 chr2 189632721 189632822 -63623761 - L1MC4 LINE L1 -1334 6988 1995 2190 96 13 13 chr2 189636396 189636708 -63619875 - AluSx SINE Alu 0 312 1 236 330 176 11 chr2 189637703 189637794 -63618789 + MER5A DNA MER1_type 1 106 -83 2257 70 42 0 chr2 189640419 189640704 -63615879 + AluSg SINE Alu 1 297 -13 33 25 0 0 chr2 189641144 189641184 -63615399 + AT_rich Low_complexity Low_complexity 1 40 0 24 0 0 0 chr2 189641444 189641468 -63615115 + AT_rich Low_complexity Low_complexity 1 24 0 651 80 0 0 chr2 189641565 189641653 -63614930 + AluJ/FLAM SINE Alu 1 88 -224 5966 84 59 3 chr2 189641665 189642548 -63614035 - L1P LINE L1 -1301 4845 3914 24 32 0 0 chr2 189642624 189642655 -63613928 + AT_rich Low_complexity Low_complexity 1 31 0 215 304 80 56 chr2 189642865 189642990 -63613593 + MIR3 SINE MIR 8 135 -73 818 264 24 5 chr2 189643005 189643217 -63613366 - MER20 DNA MER1_type -3 216 1 22 0 0 0 chr2 189645759 189645781 -63610802 + AT_rich Low_complexity Low_complexity 1 22 0 22 80 0 0 chr2 189646316 189646366 -63610217 + AT_rich Low_complexity Low_complexity 1 50 0 1471 126 96 22 chr2 189647412 189647683 -63608900 + MER1B DNA MER1_type 47 337 -2 757 233 23 22 chr2 189649938 189650194 -63606389 + MLT1B LTR MaLR 1 292 -175 252 293 264 0 chr2 189650425 189650599 -63605984 - L2 LINE L2 -178 3094 2875 1587 186 29 56 chr2 189650627 189651003 -63605580 + MLT1B LTR MaLR 23 388 -2 2227 106 0 3 chr2 189653275 189653586 -63602997 + AluSg SINE Alu 1 310 0 396 290 62 45 chr2 189655138 189655314 -63601269 - MIR3 SINE MIR -20 188 10 232 283 0 0 chr2 189655439 189655492 -63601091 - MIR SINE MIR -30 232 180 2443 111 43 6 chr2 189656442 189656793 -63599790 + THE1B LTR MaLR 1 364 0 271 321 80 62 chr2 189657687 189657799 -63598784 + L2 LINE L2 3134 3247 -25 283 216 0 23 chr2 189657846 189657934 -63598649 + GA-rich Low_complexity Low_complexity 3 88 0 28 0 0 0 chr2 189660383 189660411 -63596172 + AT_rich Low_complexity Low_complexity 1 28 0 1677 150 27 7 chr2 189660613 189660913 -63595670 + L1 LINE L1 4077 4382 -1764 * 1931 73 52 3 chr2 189660912 189661274 -63595309 + L1PA8A LINE L1 5166 5543 -588 1490 145 67 0 chr2 189661274 189661529 -63595054 - MER46B DNA MER2_type -89 147 1 2362 148 73 27 chr2 189661532 189661817 -63594766 + L1MA8 LINE L1 5785 6102 -189 2405 108 13 26 chr2 189661817 189662197 -63594386 + THE1C LTR MaLR 1 375 0 2362 148 73 27 chr2 189662197 189662392 -63594191 + L1MA8 LINE L1 6102 6287 -4 211 249 133 0 chr2 189662451 189662541 -63594042 + MER5A DNA MER1_type 46 159 -19 554 258 26 32 chr2 189662578 189662733 -63593850 + MER5A DNA MER1_type 31 184 -5 198 0 0 0 chr2 189663737 189663759 -63592824 + (A)n Simple_repeat Simple_repeat 1 22 0 183 308 128 58 chr2 189665283 189665325 -63591258 - MIR SINE MIR -75 187 149 2240 104 10 0 chr2 189665325 189665624 -63590959 - AluSx SINE Alu -10 302 1 183 308 128 58 chr2 189665624 189665737 -63590846 - MIR SINE MIR -113 149 21 7248 42 8 0 chr2 189665827 189667070 -63589513 - L1PA5 LINE L1 -12 6142 4897 274 320 132 48 chr2 189667112 189667522 -63589061 + L2 LINE L2 2600 3051 -221 266 330 54 18 chr2 189667524 189667636 -63588947 - L2 LINE L2 0 3313 3198 479 249 141 54 chr2 189667827 189668068 -63588515 - MIR SINE MIR 0 262 1 442 281 82 15 chr2 189669101 189669297 -63587286 - Charlie8 DNA MER1_type -2172 245 37 775 325 12 24 chr2 189670075 189670324 -63586259 - MIR SINE MIR -10 252 7 3527 128 7 31 chr2 189670515 189670717 -63585866 + MER4D LTR ERV1 1 206 -697 1987 128 11 4 chr2 189670717 189670998 -63585585 + AluSg SINE Alu 14 296 -14 3527 128 7 31 chr2 189670998 189671366 -63585217 + MER4D LTR ERV1 206 557 -346 1990 138 0 0 chr2 189671379 189671678 -63584905 - AluSx SINE Alu 0 307 9 2045 138 41 25 chr2 189671694 189672057 -63584526 + MER4D LTR ERV1 535 903 0 244 340 92 14 chr2 189673180 189673321 -63583262 - L3 LINE CR1 -56 1521 1370 1991 125 3 87 chr2 189673487 189673854 -63582729 - MER1B DNA MER1_type -1 336 1 21 0 0 0 chr2 189674642 189674663 -63581920 + AT_rich Low_complexity Low_complexity 1 21 0 210 241 50 99 chr2 189677231 189677372 -63579211 - L2 LINE L2 -74 3239 3106 183 323 0 0 chr2 189677728 189677790 -63578793 + L3b LINE CR1 1324 1385 -198 236 352 76 21 chr2 189677845 189678081 -63578502 + L2 LINE L2 2317 2565 -749 1091 197 0 52 chr2 189678134 189678260 -63578323 + MER46A DNA MER2_type 1 109 -2622 1695 20 0 5 chr2 189678260 189678463 -63578120 - L1PA2 LINE L1 -4 6151 5950 1091 197 0 52 chr2 189678463 189678585 -63577998 + MER46A DNA MER2_type 109 236 0 255 301 147 19 chr2 189678585 189678741 -63577842 + L2 LINE L2 2613 2788 -526 448 404 37 5 chr2 189679244 189679462 -63577121 + L3 LINE CR1 1139 1363 -214 201 313 47 31 chr2 189679476 189679540 -63577043 + MER91A DNA MER1_type 19 83 -113 207 160 0 80 chr2 189679679 189679729 -63576854 + MER91A DNA MER1_type 125 170 -20 22 35 0 0 chr2 189680315 189680344 -63576239 + AT_rich Low_complexity Low_complexity 1 29 0 338 301 73 7 chr2 189681241 189681377 -63575206 + MLT1L LTR MaLR 1 145 -470 33 43 0 0 chr2 189683128 189683175 -63573408 + AT_rich Low_complexity Low_complexity 1 47 0 192 320 0 0 chr2 189685439 189685489 -63571094 + L2 LINE L2 3008 3057 -256 658 238 41 50 chr2 189685620 189685939 -63570644 + L1MC4 LINE L1 6999 7314 -728 263 170 38 0 chr2 189685946 189685999 -63570584 + L1MC4 LINE L1 7611 7665 -377 977 291 94 3 chr2 189686074 189686448 -63570135 - L2 LINE L2 -481 2833 2426 193 267 67 0 chr2 189686448 189686508 -63570075 - L2 LINE L2 -2313 1001 938 728 209 38 13 chr2 189686557 189686715 -63569868 - MER5A DNA MER1_type -24 165 4 1498 285 95 23 chr2 189686733 189687301 -63569282 - L2 LINE L2 -2557 757 149 318 250 0 0 chr2 189687736 189687824 -63568759 + (TA)n Simple_repeat Simple_repeat 2 89 0 194 105 26 0 chr2 189687852 189687890 -63568693 + GA-rich Low_complexity Low_complexity 2 40 0 1658 176 8 0 chr2 189687898 189688160 -63568423 - AluJb SINE Alu -38 274 11 435 316 30 26 chr2 189688221 189688455 -63568128 - L1MC4a LINE L1 -1879 5929 5695 577 308 116 13 chr2 189688571 189688795 -63567788 + MIR SINE MIR 6 252 -10 514 253 77 43 chr2 189688806 189689039 -63567544 - L1MC4a LINE L1 -2252 5556 5316 378 306 100 27 chr2 189689189 189689777 -63566806 - L1MC4a LINE L1 -1005 5141 4504 237 299 57 38 chr2 189689993 189690150 -63566433 - L1P LINE L1 -1905 4241 4082 434 331 59 31 chr2 189690261 189690548 -63566035 - L1MC4a LINE L1 -2429 3717 3423 645 340 48 24 chr2 189690592 189690968 -63565615 - ERVL LTR ERVL -617 5147 4763 1692 291 88 16 chr2 189691033 189691704 -63564879 - ERVL LTR ERVL -1164 4600 3882 395 340 76 16 chr2 189691789 189691974 -63564609 - ERVL LTR ERVL -1928 3726 3531 180 0 0 0 chr2 189692089 189692109 -63564474 + (TA)n Simple_repeat Simple_repeat 2 21 0 2086 105 3 42 chr2 189692110 189692416 -63564167 - AluSx SINE Alu -18 294 1 555 177 7 75 chr2 189692431 189692578 -63564005 + L2 LINE L2 2319 2455 -859 416 267 59 59 chr2 189692582 189693137 -63563446 + L1MC5 LINE L1 7009 7410 -398 354 300 257 0 chr2 189693149 189693289 -63563294 + MER5A DNA MER1_type 1 176 -13 287 303 108 22 chr2 189693434 189693758 -63562825 + L1MC4 LINE L1 7690 8041 -1 1631 221 0 0 chr2 189693802 189694101 -63562482 + AluJo SINE Alu 1 299 -13 821 288 95 74 chr2 189694144 189694885 -63561698 + L2 LINE L2 2519 3311 -2 5510 153 39 3 chr2 189697558 189698728 -63557855 - L1MA8 LINE L1 -5 6286 5075 521 296 57 23 chr2 189698745 189699009 -63557574 - L1MC4a LINE L1 -1290 6518 6246 265 228 0 87 chr2 189699033 189699125 -63557458 - L1MA8 LINE L1 -1072 5074 4991 425 273 78 11 chr2 189699137 189699391 -63557192 + L1MC4a LINE L1 4885 5155 -991 180 0 0 0 chr2 189699392 189699412 -63557171 + (TATG)n Simple_repeat Simple_repeat 2 21 0 1386 172 47 36 chr2 189699415 189699694 -63556889 - AluJb SINE Alu -30 282 1 1952 147 0 7 chr2 189699724 189700010 -63556573 - AluSx SINE Alu -26 286 3 3651 271 109 23 chr2 189700115 189701616 -63554967 + L1MC4a LINE L1 5254 6882 -926 518 222 254 16 chr2 189702235 189702420 -63554163 + MIR SINE MIR 2 230 -32 216 97 0 0 chr2 189702430 189702461 -63554122 + (ATG)n Simple_repeat Simple_repeat 3 33 0 267 261 209 8 chr2 189702631 189702765 -63553818 - MIR SINE MIR -54 208 48 440 335 32 41 chr2 189703453 189703671 -63552912 + MIR SINE MIR 20 235 -27 214 293 0 0 chr2 189703737 189703795 -63552788 - MIR SINE MIR 0 262 205 291 337 12 61 chr2 189705146 189705309 -63551274 + MIR SINE MIR 3 157 -105 351 256 25 33 chr2 189706340 189706461 -63550122 + MER5B DNA MER1_type 4 123 -55 343 231 91 8 chr2 189706544 189706665 -63549918 - L1MEd LINE L1 -5248 871 741 307 312 0 11 chr2 189708139 189708232 -63548351 + L1PA15-16 LINE L1 1473 1564 -5285 5795 230 32 27 chr2 189708236 189708826 -63547757 + L1PA15-16 LINE L1 1355 1941 -4908 2005 135 0 3 chr2 189708826 189709136 -63547447 + AluSx SINE Alu 1 309 0 5795 230 32 27 chr2 189709136 189710754 -63545829 + L1PA15-16 LINE L1 1941 3680 -3169 2123 118 0 7 chr2 189710850 189711154 -63545429 + AluSx SINE Alu 1 302 -10 183 42 0 0 chr2 189711642 189711666 -63544917 + (TTTTTG)n Simple_repeat Simple_repeat 1 24 0 1562 198 67 6 chr2 189712966 189713325 -63543258 + L1 LINE L1 4325 4705 -2144 1331 109 25 0 chr2 189713693 189713894 -63542689 + L1PA13 LINE L1 5958 6163 0 2643 236 88 19 chr2 189714566 189715393 -63541190 + L1MEc LINE L1 34 917 -5479 348 224 16 22 chr2 189715577 189715890 -63540693 + GA-rich Low_complexity Low_complexity 1 311 0 607 199 29 7 chr2 189716725 189716861 -63539722 - Charlie1 DNA MER1_type 0 2761 2623 541 217 228 0 chr2 189716866 189717046 -63539537 - Charlie1 DNA MER1_type -2534 227 7 247 238 16 16 chr2 189717149 189717212 -63539371 - L1MC4 LINE L1 -1039 7003 6941 249 196 36 0 chr2 189717279 189717335 -63539248 - L1MC3 LINE L1 -1012 6773 6716 934 220 0 6 chr2 189717772 189717945 -63538638 - FAM SINE Alu -3 172 1 252 281 58 7 chr2 189717952 189718091 -63538492 - L1 LINE L1 -786 5360 5215 334 269 147 46 chr2 189718392 189718883 -63537700 + L1MC4a LINE L1 4015 4579 -1567 1313 43 0 0 chr2 189718883 189719046 -63537537 - L1PA2 LINE L1 -1 6154 5992 334 269 147 46 chr2 189719046 189719138 -63537445 + L1MC4a LINE L1 4579 4660 -1486 1947 115 14 35 chr2 189719190 189719502 -63537081 + AluSx SINE Alu 1 306 0 323 254 98 34 chr2 189719932 189720420 -63536163 + L1MC4a LINE L1 5299 5612 -509 464 211 84 84 chr2 189720615 189720718 -63535865 + L1ME LINE L1 5592 5694 -427 2191 124 0 3 chr2 189720718 189721025 -63535558 + AluSg SINE Alu 1 306 -4 464 211 84 84 chr2 189721025 189721148 -63535435 + L1ME LINE L1 5693 5818 -303 1608 152 0 82 chr2 189721159 189721475 -63535108 + AluJo SINE Alu 7 296 -16 554 303 106 0 chr2 189721770 189721958 -63534625 - MIR SINE MIR -16 246 39 1114 221 72 8 chr2 189722043 189722364 -63534219 - L1ME2 LINE L1 0 6164 5826 21 57 0 0 chr2 189722377 189722412 -63534171 + AT_rich Low_complexity Low_complexity 1 35 0 225 192 0 0 chr2 189722531 189722583 -63534000 - L1MA9 LINE L1 0 6312 6261 1612 149 43 28 chr2 189722705 189723028 -63533555 - L1MA9 LINE L1 -74 6238 5911 2467 82 3 0 chr2 189725983 189726288 -63530295 - AluY SINE Alu -5 306 1 4377 211 52 10 chr2 189726711 189727827 -63528756 + Charlie1a DNA MER1_type 51 1213 -242 1048 207 52 0 chr2 189727828 189728041 -63528542 + L1PB4 LINE L1 5924 6147 -9 824 163 91 69 chr2 189728067 189728183 -63528400 + Charlie1a DNA MER1_type 1174 1286 -1475 2172 100 20 3 chr2 189728183 189728484 -63528099 - AluSx SINE Alu -2 310 5 824 163 91 69 chr2 189728484 189728643 -63527940 + Charlie1a DNA MER1_type 1286 1455 0 219 233 14 68 chr2 189729288 189729361 -63527222 + L2 LINE L2 3241 3309 -4 186 222 111 0 chr2 189729751 189729796 -63526787 - L2 LINE L2 -1 3312 3263 994 204 85 63 chr2 189733472 189733791 -63522792 + MER46C DNA MER2_type 1 326 -12 2433 278 109 19 chr2 189733791 189734022 -63522561 - L2 LINE L2 -362 2952 2743 1451 194 20 30 chr2 189734022 189734321 -63522262 + AluJo SINE Alu 1 296 -16 2433 278 109 19 chr2 189734321 189735023 -63521560 - L2 LINE L2 -571 2743 1935 302 293 85 0 chr2 189735165 189735247 -63521336 - MIR SINE MIR -48 214 126 249 292 146 39 chr2 189735405 189735535 -63521048 + MIR3 SINE MIR 18 161 -47 399 240 83 0 chr2 189735536 189735632 -63520951 - L2 LINE L2 0 3313 3210 403 229 68 88 chr2 189735712 189735904 -63520679 - MIR SINE MIR -43 219 32 1405 196 0 48 chr2 189739811 189740122 -63516461 - AluJb SINE Alu -16 296 1 1671 202 51 16 chr2 189740180 189740551 -63516032 + MLT1B LTR MaLR 1 384 -6 22 0 0 0 chr2 189745100 189745122 -63511461 + AT_rich Low_complexity Low_complexity 1 22 0 272 314 59 65 chr2 189746407 189746576 -63510007 + L2 LINE L2 2892 3059 -213 1717 292 104 54 chr2 189746832 189748343 -63508240 + L1MC4a LINE L1 5405 6991 -817 275 301 118 35 chr2 189748485 189748714 -63507869 + LTR16B LTR ERVL 110 357 -107 988 236 106 19 chr2 189748715 189749130 -63507453 + L1MC5 LINE L1 7423 7873 -88 526 257 168 20 chr2 189749449 189749674 -63506909 + MIR SINE MIR 4 259 -3 615 117 0 0 chr2 189751044 189751138 -63505445 + (TA)n Simple_repeat Simple_repeat 2 95 0 863 129 0 0 chr2 189751148 189751264 -63505319 - FLAM_C SINE Alu -27 116 1 1030 205 19 0 chr2 189751476 189751681 -63504902 - MER3 DNA MER1_type 0 209 1 334 333 19 0 chr2 189752988 189753096 -63503487 - MIR3 SINE MIR -11 197 88 439 286 91 7 chr2 189753226 189753380 -63503203 - MER112 DNA MER1_type -7 253 87 291 129 243 0 chr2 189755104 189755174 -63501409 - L2 LINE L2 0 3313 3227 798 257 183 57 chr2 189755178 189755637 -63500946 + LTR33 LTR ERVL 5 521 0 305 292 74 88 chr2 189755637 189756000 -63500583 - L2 LINE L2 -84 3229 2872 246 340 74 55 chr2 189756421 189756910 -63499673 - L2 LINE L2 -1253 2061 1564 4465 215 81 34 chr2 189757137 189759523 -63497060 + L1MA6 LINE L1 1320 3523 -3325 991 168 0 174 chr2 189759523 189759851 -63496732 + AluSc SINE Alu 1 271 -38 693 92 0 0 chr2 189759852 189759950 -63496633 + (GGAA)n Simple_repeat Simple_repeat 2 99 0 8947 179 88 22 chr2 189759959 189760251 -63496332 + L1MA6 LINE L1 3505 3776 -3226 2366 93 3 3 chr2 189760251 189760563 -63496020 + AluSp SINE Alu 1 312 -1 8947 179 88 22 chr2 189760563 189762554 -63494029 + L1MA6 LINE L1 3776 6086 -916 2366 89 0 0 chr2 189762554 189762847 -63493736 - AluSc SINE Alu -16 293 1 8947 179 88 22 chr2 189762847 189763822 -63492761 + L1MA6 LINE L1 6086 6995 -7 288 169 39 39 chr2 189763841 189763918 -63492665 + Charlie4a DNA MER1_type 269 345 -163 1102 133 17 6 chr2 189764547 189764728 -63491855 - AluSq SINE Alu -1 312 130 336 270 182 0 chr2 189767086 189767234 -63489349 - MER5A DNA MER1_type -6 183 9 901 234 11 0 chr2 189767675 189767850 -63488733 + MER5B DNA MER1_type 2 178 0 1408 275 157 33 chr2 189768681 189769567 -63487016 + L2 LINE L2 2067 3061 -252 1950 196 93 52 chr2 189769593 189769794 -63486789 - MLT1D LTR MaLR 0 505 314 1805 161 71 28 chr2 189769794 189770116 -63486467 - MER1B DNA MER1_type 0 337 2 1950 196 93 52 chr2 189770116 189770137 -63486446 - MLT1D LTR MaLR -191 314 295 200 35 35 0 chr2 189770137 189770166 -63486417 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1950 196 93 52 chr2 189770166 189770427 -63486156 - MLT1D LTR MaLR -210 295 1 510 237 61 0 chr2 189770568 189770682 -63485901 + L2 LINE L2 3192 3312 -1 330 206 0 0 chr2 189770772 189770845 -63485738 + (TA)n Simple_repeat Simple_repeat 1 73 0 741 312 109 33 chr2 189771493 189772014 -63484569 + L2 LINE L2 2751 3311 -2 24 0 0 0 chr2 189772852 189772876 -63483707 + AT_rich Low_complexity Low_complexity 1 24 0 5865 26 0 1 chr2 189773125 189773811 -63482772 - L1PA3 LINE L1 -932 5214 4530 8105 21 6 4 chr2 189773811 189774762 -63481821 + L1PA3 LINE L1 5205 6155 0 577 244 68 83 chr2 189774845 189775027 -63481556 - MLT1L LTR MaLR -235 380 197 253 250 44 0 chr2 189775027 189775095 -63481488 - LTR67 LTR ERVL -407 150 80 577 244 68 83 chr2 189775095 189775150 -63481433 - MLT1L LTR MaLR -418 197 11 747 264 99 82 chr2 189775176 189775702 -63480881 - MLT1H1 LTR MaLR 0 549 15 394 261 15 84 chr2 189775854 189776057 -63480526 - MLT1H1-int LTR MaLR -185 1186 998 3724 111 50 45 chr2 189776277 189776880 -63479703 + MER4B LTR ERV1 1 606 -4 371 211 22 33 chr2 189776977 189777067 -63479516 + MER21B LTR ERV1 1 89 -774 2308 233 106 6 chr2 189777201 189777850 -63478733 + MER21B LTR ERV1 98 811 -52 260 310 158 11 chr2 189778969 189779153 -63477430 - MLT1K LTR MaLR 0 588 378 268 241 115 35 chr2 189779361 189779448 -63477135 - MLT1I LTR MaLR -2 407 314 1843 170 28 70 chr2 189780295 189780725 -63475858 - MLT1C LTR MaLR -2 465 54 284 70 23 0 chr2 189780796 189780839 -63475744 + (CA)n Simple_repeat Simple_repeat 1 44 0 1936 153 0 7 chr2 189781208 189781502 -63475081 - AluJb SINE Alu -20 292 1 436 303 76 54 chr2 189782190 189782507 -63474076 - L2 LINE L2 -16 3297 2974 23 78 0 0 chr2 189783736 189783787 -63472796 + AT_rich Low_complexity Low_complexity 1 51 0 22 0 0 0 chr2 189785015 189785037 -63471546 + AT_rich Low_complexity Low_complexity 1 22 0 306 0 0 0 chr2 189787493 189787527 -63469056 + (T)n Simple_repeat Simple_repeat 1 34 0 29 0 0 0 chr2 189787778 189787807 -63468776 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 189787936 189787957 -63468626 + AT_rich Low_complexity Low_complexity 1 21 0 236 125 0 54 chr2 189789014 189789070 -63467513 + (TCC)n Simple_repeat Simple_repeat 2 54 0 21 0 0 0 chr2 189790596 189790617 -63465966 + AT_rich Low_complexity Low_complexity 1 21 0 299 259 0 43 chr2 189791021 189791137 -63465446 + C-rich Low_complexity Low_complexity 1 111 0 23 33 0 0 chr2 189794051 189794081 -63462502 + GC_rich Low_complexity Low_complexity 1 30 0 301 331 11 17 chr2 189794105 189794286 -63462297 + G-rich Low_complexity Low_complexity 1 180 0 407 326 0 11 chr2 189795262 189795440 -63461143 + (TG)n Simple_repeat Simple_repeat 1 176 0 531 171 23 8 chr2 189795919 189796048 -63460535 + CT-rich Low_complexity Low_complexity 3 133 0 2417 70 3 0 chr2 189798452 189798750 -63457833 - AluSp SINE Alu -14 299 1 443 233 50 33 chr2 189799101 189799221 -63457362 - L2 LINE L2 -10 3303 3182 21 36 0 0 chr2 189799343 189799371 -63457212 + AT_rich Low_complexity Low_complexity 1 28 0 233 163 70 0 chr2 189799652 189799695 -63456888 + MER5A DNA MER1_type 143 188 -1 819 336 63 16 chr2 189800738 189801116 -63455467 + ERVL LTR ERVL 1766 2161 -3603 297 197 45 0 chr2 189801213 189801279 -63455304 + ERVL LTR ERVL 2302 2370 -3394 887 301 71 13 chr2 189801287 189801743 -63454840 + MLT1J LTR MaLR 1 504 -7 283 278 52 41 chr2 189801750 189801847 -63454736 + ERVL LTR ERVL 2336 2433 -3221 1146 125 68 42 chr2 189801848 189802040 -63454543 - AluSq SINE Alu -78 235 39 327 223 39 29 chr2 189802040 189802143 -63454440 + ERVL LTR ERVL 2435 2538 -2947 660 155 78 17 chr2 189802143 189802259 -63454324 - FLAM_A SINE Alu -6 127 5 387 347 21 0 chr2 189802408 189802552 -63454031 + ERVL LTR ERVL 2843 2989 -2775 23 33 0 0 chr2 189802579 189802609 -63453974 + AT_rich Low_complexity Low_complexity 1 30 0 2825 196 41 38 chr2 189802928 189803588 -63452995 + L1MB7 LINE L1 5502 6163 -21 280 314 38 22 chr2 189803615 189803800 -63452783 + L2 LINE L2 1996 2183 -1131 4272 195 149 4 chr2 189803805 189804796 -63451787 + Tigger6b DNA MER2_type 2 1136 -461 1160 179 277 40 chr2 189805560 189805885 -63450698 + Tigger6b DNA MER2_type 1128 1557 -40 1903 128 48 0 chr2 189805885 189806174 -63450409 - AluSx SINE Alu -7 305 3 1160 179 277 40 chr2 189806174 189806227 -63450356 + Tigger6b DNA MER2_type 1557 1596 -1 548 252 45 87 chr2 189806242 189806484 -63450099 - MLT1K LTR MaLR -41 547 316 438 298 63 87 chr2 189806885 189807257 -63449326 + L2 LINE L2 2301 2680 -592 3845 157 56 28 chr2 189807257 189807299 -63449284 - L1MB3 LINE L1 -2 6181 6142 1975 121 10 10 chr2 189807299 189807597 -63448986 - AluSc SINE Alu -11 298 1 3845 157 56 28 chr2 189807597 189808267 -63448316 - L1MB3 LINE L1 -41 6142 5449 438 298 63 87 chr2 189808267 189808761 -63447822 + L2 LINE L2 2680 3091 -181 365 197 28 0 chr2 189808852 189808923 -63447660 + Charlie5 DNA MER1_type 25 97 -2515 1407 172 129 6 chr2 189808945 189809293 -63447290 + Charlie5 DNA MER1_type 2234 2624 0 185 396 0 0 chr2 189809295 189809343 -63447240 + L2 LINE L2 3150 3197 -75 494 302 74 50 chr2 189809357 189809599 -63446984 - MIR SINE MIR -14 248 1 284 381 113 24 chr2 189809701 189810037 -63446546 - L2 LINE L2 0 3272 2907 2384 78 0 0 chr2 189810038 189810332 -63446251 + AluY SINE Alu 1 294 -17 317 353 38 27 chr2 189810396 189810580 -63446003 - L2 LINE L2 -614 2700 2515 257 307 13 67 chr2 189810720 189810870 -63445713 + MLT1L LTR MaLR 135 276 -339 2869 6 0 3 chr2 189810910 189811222 -63445361 - AluY SINE Alu 0 311 1 385 348 109 4 chr2 189811463 189811693 -63444890 - L2 LINE L2 -841 2473 2220 1105 256 59 16 chr2 189811919 189812327 -63444256 - LTR16C LTR ERVL -7 484 6 3180 68 11 57 chr2 189812732 189813113 -63443470 - L1PA13 LINE L1 -8 6155 5758 2095 154 47 19 chr2 189813113 189813476 -63443107 - THE1C LTR MaLR 0 375 3 8041 148 73 55 chr2 189813478 189815027 -63441556 - THE1C-int LTR MaLR 0 1580 4 2033 149 55 19 chr2 189815030 189815392 -63441191 - THE1C LTR MaLR 0 375 1 3180 68 11 57 chr2 189815392 189815457 -63441126 - L1PA13 LINE L1 -408 5755 5723 1997 96 21 0 chr2 189815457 189815739 -63440844 - L1P4 LINE L1 -577 5591 5304 * 2673 179 2 2 chr2 189815736 189816254 -63440329 + L1P LINE L1 2927 3444 -2702 1848 159 17 0 chr2 189817725 189818015 -63438568 + AluJo SINE Alu 12 306 -6 249 269 124 41 chr2 189818534 189818623 -63437960 - MER103 DNA DNA -2 164 57 1124 237 70 59 chr2 189818623 189819083 -63437500 - LTR40c LTR ERVL 0 465 1 249 269 124 41 chr2 189819083 189819138 -63437445 - MER103 DNA DNA -109 57 8 30 27 0 0 chr2 189819251 189819288 -63437295 + AT_rich Low_complexity Low_complexity 1 37 0 978 174 0 0 chr2 189819950 189820140 -63436443 - L1MA4 LINE L1 -3 6297 6108 819 251 88 91 chr2 189821357 189821443 -63435140 - L2 LINE L2 -75 3238 3153 2380 110 11 8 chr2 189821443 189821797 -63434786 + THE1A LTR MaLR 1 355 0 11495 95 13 2 chr2 189821797 189823360 -63433223 + THE1A-int LTR MaLR 1 1580 0 2265 108 11 28 chr2 189823360 189823721 -63432862 + THE1A LTR MaLR 1 355 0 819 251 88 91 chr2 189823721 189824079 -63432504 - L2 LINE L2 -158 3155 2806 2729 99 0 3 chr2 189824079 189824444 -63432139 + THE1B LTR MaLR 1 364 0 819 251 88 91 chr2 189824444 189824474 -63432109 - L2 LINE L2 -507 2806 2777 241 159 114 0 chr2 189824486 189824530 -63432053 - L2 LINE L2 -93 3220 3172 565 319 70 78 chr2 189824766 189825339 -63431244 - L2 LINE L2 -398 2916 2349 462 229 25 114 chr2 189826738 189826939 -63429644 - MIR SINE MIR -48 214 32 397 312 55 11 chr2 189827499 189827685 -63428898 + MIR SINE MIR 16 211 -51 234 315 225 0 chr2 189827694 189827783 -63428800 - L2 LINE L2 -16 3256 3148 1066 303 88 20 chr2 189827866 189828322 -63428261 - LTR16C LTR ERVL 0 491 5 801 182 102 16 chr2 189828553 189828740 -63427843 + MER3 DNA MER1_type 7 209 0 260 220 0 0 chr2 189828703 189828753 -63427830 - MER3 DNA MER1_type -125 84 35 * 1820 188 0 13 chr2 189828856 189829154 -63427429 - AluJb SINE Alu -18 294 1 275 206 27 0 chr2 189830731 189830804 -63425779 + (TA)n Simple_repeat Simple_repeat 2 76 0 2196 132 0 0 chr2 189830868 189831164 -63425419 + AluSg SINE Alu 1 296 -14 666 286 52 14 chr2 189831708 189831918 -63424665 + MIR SINE MIR 37 254 -8 573 304 97 13 chr2 189832383 189832610 -63423973 + MIR SINE MIR 15 260 -2 228 145 113 48 chr2 189832863 189832925 -63423658 - MLT1J2 LTR MaLR -384 66 1 255 256 45 150 chr2 189833141 189833363 -63423220 - MIR SINE MIR 0 262 71 2316 101 0 7 chr2 189833363 189833669 -63422914 + AluSc SINE Alu 1 304 -5 255 256 45 150 chr2 189833669 189833712 -63422871 - MIR SINE MIR -191 71 25 964 276 85 56 chr2 189833819 189834358 -63422225 - MLT1H1 LTR MaLR 0 555 1 248 184 102 51 chr2 189836706 189836804 -63419779 - MLT1I LTR MaLR 0 409 307 722 203 0 0 chr2 189836892 189837015 -63419568 + FLAM_A SINE Alu 1 123 -10 524 234 35 28 chr2 189837018 189837163 -63419420 - MLT1I LTR MaLR -202 207 62 308 313 94 0 chr2 189837619 189837747 -63418836 - MIR SINE MIR -71 191 52 2806 10 0 0 chr2 189838112 189838416 -63418167 - AluY SINE Alu -7 304 1 23 0 0 0 chr2 189838419 189838442 -63418141 + AT_rich Low_complexity Low_complexity 1 23 0 1604 268 9 16 chr2 189838682 189839123 -63417460 - LTR16B LTR ERVL 0 464 27 758 318 23 47 chr2 189839133 189840067 -63416516 - ERVL LTR ERVL 0 5343 4233 598 347 32 24 chr2 189840087 189840427 -63416156 - ERVL LTR ERVL -1143 4621 4279 692 274 79 26 chr2 189840560 189840900 -63415683 - ERVL LTR ERVL -1229 3767 3410 797 182 0 0 chr2 189841556 189841677 -63414906 + FLAM_A SINE Alu 1 121 -12 449 272 20 7 chr2 189841680 189841827 -63414756 - MLT1I LTR MaLR -202 207 59 36059 89 5 10 chr2 189842034 189848208 -63408375 + L1PA6 LINE L1 11 6152 -2 1953 143 73 10 chr2 189848309 189848694 -63407889 - L1PBb LINE L1 -5253 951 543 264 230 127 32 chr2 189848782 189848908 -63407675 + MIR SINE MIR 124 261 -1 302 176 29 0 chr2 189848924 189848992 -63407591 + MER116 DNA Mariner 5 74 -6 1215 144 43 19 chr2 189849092 189849162 -63407421 + L1MA7 LINE L1 6025 6092 -199 2537 127 36 10 chr2 189849162 189849579 -63407004 + MSTA LTR MaLR 1 428 0 1215 144 43 19 chr2 189849579 189849764 -63406819 + L1MA7 LINE L1 6092 6286 -5 289 247 0 26 chr2 189852580 189852657 -63403926 + L2 LINE L2 3239 3313 0 263 261 0 15 chr2 189852885 189852950 -63403633 - MIR3 SINE MIR -12 196 133 195 42 0 0 chr2 189854980 189855004 -63401579 + (TG)n Simple_repeat Simple_repeat 1 24 0 2245 104 0 13 chr2 189855005 189855312 -63401271 - AluSq SINE Alu -10 303 1 278 308 0 0 chr2 189855634 189855699 -63400884 - MIR SINE MIR -78 130 66 2024 127 3 3 chr2 189855715 189856036 -63400547 - AluSx SINE Alu 0 321 1 28 29 0 0 chr2 189856564 189856599 -63399984 + AT_rich Low_complexity Low_complexity 1 35 0 831 292 99 16 chr2 189857272 189857811 -63398772 - L1ME3 LINE L1 -211 5951 5366 2189 150 31 16 chr2 189857997 189858378 -63398205 - MSTB LTR MaLR 0 426 40 11465 111 15 30 chr2 189858378 189861191 -63395392 - L1P3 LINE L1 -3432 3029 185 454 331 57 60 chr2 189861304 189861673 -63394910 + L2 LINE L2 2818 3185 -87 1999 131 34 0 chr2 189861802 189862100 -63394483 + AluSx SINE Alu 1 308 -4 451 53 0 80 chr2 189862104 189862217 -63394366 + (GGGAA)n Simple_repeat Simple_repeat 2 105 0 2325 80 3 7 chr2 189865574 189865873 -63390710 - AluY SINE Alu -13 298 1 199 349 12 0 chr2 189866032 189866115 -63390468 + MIR SINE MIR 127 210 -52 4138 108 15 52 chr2 189866348 189867027 -63389556 + L1PA13 LINE L1 5508 6161 -2 288 354 0 0 chr2 189867028 189867127 -63389456 - MIR SINE MIR -7 255 157 10174 59 7 2 chr2 189867990 189869379 -63387204 + L1P LINE L1 3166 4560 -1586 2345 182 50 26 chr2 189869803 189870115 -63386468 - L1MC3 LINE L1 -1 7784 7450 1696 153 65 7 chr2 189870115 189870409 -63386174 - AluJb SINE Alu -1 311 1 2345 182 50 26 chr2 189870409 189870672 -63385911 - L1MC3 LINE L1 -335 7450 7195 397 219 18 35 chr2 189871269 189871383 -63385200 + MIR SINE MIR 58 169 -93 1247 193 81 127 chr2 189871384 189871739 -63384844 + LTR40b LTR ERVL 4 333 -129 1880 141 30 30 chr2 189871739 189872100 -63384483 + MER46B DNA MER2_type 1 236 0 1247 193 81 127 chr2 189872100 189872225 -63384358 + LTR40b LTR ERVL 333 462 0 22 0 0 0 chr2 189872381 189872403 -63384180 + AT_rich Low_complexity Low_complexity 1 22 0 835 198 21 36 chr2 189873352 189873544 -63383039 + MER5A DNA MER1_type 1 189 0 642 284 123 30 chr2 189873702 189873938 -63382645 + MIR SINE MIR 5 262 0 1064 197 58 10 chr2 189874817 189875236 -63381347 - MLT1C LTR MaLR -6 461 3 3838 62 14 2 chr2 189875631 189876133 -63380450 - L1PA6 LINE L1 -3 6151 5644 6873 53 5 1 chr2 189877725 189879126 -63377457 + L1PA6 LINE L1 4731 6139 -15 416 334 117 46 chr2 189880482 189881043 -63375540 - L2 LINE L2 0 3272 2684 493 368 35 13 chr2 189881165 189881483 -63375100 - L2 LINE L2 -881 2433 2109 2296 90 3 0 chr2 189881990 189882280 -63374303 + AluY SINE Alu 1 291 -20 796 222 0 38 chr2 189882431 189882616 -63373967 - FRAM SINE Alu -1 175 1 379 279 224 15 chr2 189882651 189882852 -63373731 - MIR SINE MIR -14 248 6 469 231 33 16 chr2 189884065 189884186 -63372397 + MER20 DNA MER1_type 7 129 -90 266 206 18 61 chr2 189884308 189884414 -63372169 - MER74B LTR ERVL -162 420 293 420 154 10 67 chr2 189884589 189884693 -63371890 + MER20 DNA MER1_type 122 219 0 1322 139 116 12 chr2 189885111 189885369 -63371214 + MSTA LTR MaLR 1 285 -143 5629 87 21 17 chr2 189885408 189886473 -63370110 - L1PA8A LINE L1 -28 6103 5042 1991 150 0 0 chr2 189890519 189890819 -63365764 - AluSx SINE Alu -12 300 1 1651 177 0 39 chr2 189892156 189892466 -63364117 + AluJo SINE Alu 1 298 -14 244 285 36 58 chr2 189893176 189893313 -63363270 - MIR SINE MIR -10 252 119 18119 132 9 13 chr2 189893984 189897045 -63359538 + L1P LINE L1 11 3059 -3087 406 263 152 20 chr2 189899307 189899491 -63357092 - MIR SINE MIR -4 258 55 271 248 63 151 chr2 189900027 189900265 -63356318 - L2 LINE L2 -186 3086 2870 3381 87 34 0 chr2 189900514 189900985 -63355598 - L1PA10 LINE L1 -16 6152 5666 900 208 33 0 chr2 189901094 189901277 -63355306 - MER5A DNA MER1_type 0 189 1 345 356 44 19 chr2 189902944 189903104 -63353479 + MIR3 SINE MIR 30 193 -15 188 342 77 0 chr2 189903215 189903318 -63353265 + MIR SINE MIR 10 118 -90 26 0 0 0 chr2 189903689 189903715 -63352868 + AT_rich Low_complexity Low_complexity 1 26 0 672 279 119 19 chr2 189904413 189904875 -63351708 + MER115 DNA AcHobo 151 693 0 1225 136 42 4 chr2 189905381 189905617 -63350966 - L1MC3 LINE L1 -594 7191 6947 1497 169 17 51 chr2 189905659 189906009 -63350574 - L1MC3 LINE L1 -785 7000 6663 295 306 150 31 chr2 189906437 189906630 -63349953 + MIR SINE MIR 5 220 -42 313 289 58 33 chr2 189909170 189909291 -63347292 - MIR3 SINE MIR -13 195 72 6097 171 23 23 chr2 189909653 189910943 -63345640 + L1MC3 LINE L1 5350 6639 -1146 1359 256 74 49 chr2 189911544 189912280 -63344303 - L2 LINE L2 -22 3291 2529 1926 252 84 16 chr2 189912298 189913408 -63343175 - L1MEc LINE L1 -3136 3079 1901 2163 117 7 3 chr2 189913408 189913708 -63342875 - AluSq SINE Alu -12 301 1 1926 252 84 16 chr2 189913708 189913909 -63342674 - L1MEc LINE L1 -4314 1901 1715 191 354 73 0 chr2 189913918 189914000 -63342583 - L2 LINE L2 -780 2534 2447 22 0 0 0 chr2 189914036 189914058 -63342525 + AT_rich Low_complexity Low_complexity 1 22 0 644 168 77 7 chr2 189914348 189914491 -63342092 - LTR32 LTR ERVL 0 471 319 1592 192 40 3 chr2 189914588 189914911 -63341672 - LTR32 LTR ERVL -122 349 15 694 167 0 0 chr2 189915116 189915224 -63341359 + FLAM_C SINE Alu 1 108 -35 1499 164 50 14 chr2 189916042 189916323 -63340260 - AluJo SINE Alu -21 291 1 1889 220 95 18 chr2 189917922 189918491 -63338092 - LTR48B LTR ERV1 0 644 32 1784 108 4 4 chr2 189918497 189918746 -63337837 - AluSq SINE Alu -64 249 1 2147 144 0 3 chr2 189919696 189920009 -63336574 + AluSx SINE Alu 1 312 0 332 200 33 44 chr2 189920396 189920486 -63336097 - MIR SINE MIR -66 196 108 16331 42 8 0 chr2 189921262 189924052 -63332531 - L1PA4 LINE L1 0 6155 3351 3561 45 2 2 chr2 189924152 189924622 -63331961 - L1PA4 LINE L1 -2794 3352 2883 194 105 26 0 chr2 189925474 189925512 -63331071 + (TG)n Simple_repeat Simple_repeat 2 40 0 693 385 65 40 chr2 189927210 189927606 -63328977 + L2 LINE L2 1775 2160 -1154 2054 178 19 3 chr2 189927606 189927965 -63328618 + MLT1A1 LTR MaLR 1 365 0 693 385 65 40 chr2 189927965 189928189 -63328394 + L2 LINE L2 2160 2377 -937 4349 171 18 1 chr2 189928189 189928909 -63327674 - MER44D DNA MER2_type -1 604 1 693 385 65 40 chr2 189928909 189929248 -63327335 + L2 LINE L2 2377 2759 -555 2244 84 33 0 chr2 189929313 189929612 -63326971 + AluSg SINE Alu 1 309 -1 284 400 113 29 chr2 189929722 189930067 -63326516 + L2 LINE L2 2892 3265 -7 22 0 0 0 chr2 189930289 189930311 -63326272 + AT_rich Low_complexity Low_complexity 1 22 0 1704 183 0 7 chr2 189930923 189931237 -63325346 + AluJo SINE Alu 1 312 0 359 351 90 5 chr2 189931292 189931480 -63325103 - MIR SINE MIR -18 244 41 422 208 39 0 chr2 189935858 189935935 -63320648 + MER81 DNA DNA 32 111 -3 298 279 21 82 chr2 189936608 189936841 -63319742 - ERVL LTR ERVL -414 5350 5132 531 272 85 51 chr2 189937454 189937785 -63318798 - LTR16A LTR ERVL -107 350 9 239 350 66 33 chr2 189940232 189940415 -63316168 + L2 LINE L2 1390 1578 -1736 180 358 0 15 chr2 189941390 189941457 -63315126 + L2 LINE L2 2783 2848 -466 600 169 12 100 chr2 189941520 189941680 -63314903 - FRAM SINE Alu -11 165 20 210 207 0 0 chr2 189943672 189943730 -63312853 + (TA)n Simple_repeat Simple_repeat 2 59 0 266 194 15 0 chr2 189944266 189944333 -63312250 + (TA)n Simple_repeat Simple_repeat 2 69 0 1814 166 0 14 chr2 189944660 189944944 -63311639 + AluJo SINE Alu 10 289 -23 2334 101 0 0 chr2 189944949 189945247 -63311336 + AluSx SINE Alu 1 298 -14 201 158 0 26 chr2 189946446 189946484 -63310099 + MIR SINE MIR 110 146 -62 1236 117 0 0 chr2 189946527 189946689 -63309894 + AluSg/x SINE Alu 135 296 -16 21 36 0 0 chr2 189948026 189948054 -63308529 + AT_rich Low_complexity Low_complexity 1 28 0 889 294 158 24 chr2 189950283 189950738 -63305845 - MLT1G LTR MaLR -7 583 68 231 157 0 0 chr2 189951103 189951154 -63305429 + T-rich Low_complexity Low_complexity 1 51 0 1720 150 60 44 chr2 189951191 189951558 -63305025 - THE1C LTR MaLR 0 375 3 323 305 71 52 chr2 189952464 189952618 -63303965 + MIR SINE MIR 5 161 -101 369 0 0 0 chr2 189952678 189952719 -63303864 + (TG)n Simple_repeat Simple_repeat 2 42 0 741 285 28 24 chr2 189953831 189954122 -63302461 - L2 LINE L2 -27 3286 2995 272 364 87 12 chr2 189954483 189954656 -63301927 + MER5A DNA MER1_type 1 186 -3 2324 95 0 3 chr2 189954860 189955155 -63301428 - AluSx SINE Alu -18 294 1 698 251 24 29 chr2 189956545 189956752 -63299831 - MIR SINE MIR 0 262 57 422 315 84 78 chr2 189960514 189960835 -63295748 - L3 LINE CR1 -1070 507 185 640 176 64 0 chr2 189960859 189960984 -63295599 - FLAM_C SINE Alu 0 133 1 785 182 85 12 chr2 189961458 189961623 -63294960 + MER20 DNA MER1_type 43 219 0 180 263 0 0 chr2 189962125 189962201 -63294382 + A-rich Low_complexity Low_complexity 1 76 0 1391 186 80 4 chr2 189962458 189962752 -63293831 - AluJb SINE Alu 0 314 1 412 336 31 10 chr2 189963190 189963349 -63293234 + MIR SINE MIR 42 200 -62 218 357 129 14 chr2 189963434 189963574 -63293009 - L3 LINE CR1 -7 1570 1415 313 208 13 13 chr2 189963589 189963666 -63292917 - MER116 DNA Mariner 0 80 4 703 262 17 12 chr2 189963796 189963820 -63292763 + MIR SINE MIR 8 30 -232 1677 230 6 0 chr2 189963820 189964159 -63292424 + MER58B DNA MER1_type 1 341 0 703 262 17 12 chr2 189964159 189964306 -63292277 + MIR SINE MIR 30 180 -82 25 31 0 0 chr2 189964330 189964362 -63292221 + AT_rich Low_complexity Low_complexity 1 32 0 23 68 0 0 chr2 189965608 189965652 -63290931 + AT_rich Low_complexity Low_complexity 1 44 0 532 239 25 36 chr2 189966918 189967076 -63289507 + MIR3 SINE MIR 44 195 -13 22 0 0 0 chr2 189967441 189967463 -63289120 + AT_rich Low_complexity Low_complexity 1 22 0 2371 75 7 0 chr2 189969191 189969486 -63287097 - AluSc SINE Alu -10 299 3 330 241 163 30 chr2 189970446 189970612 -63285971 + L2 LINE L2 2445 2632 -682 242 164 180 0 chr2 189970684 189970745 -63285838 - LTR48B LTR ERV1 -44 600 529 451 250 33 8 chr2 189971068 189971188 -63285395 + L2 LINE L2 2635 2757 -557 4422 163 66 21 chr2 189971874 189973095 -63283488 - L1MB8 LINE L1 -1 6177 4903 465 318 92 8 chr2 189973410 189973649 -63282934 - L2 LINE L2 0 3313 3055 259 215 37 0 chr2 189973655 189973782 -63282801 + (TATAG)n Simple_repeat Simple_repeat 1 131 0 200 288 34 0 chr2 189973841 189973900 -63282683 - L2 LINE L2 -342 2971 2911 28 0 0 0 chr2 189974966 189974994 -63281589 + AT_rich Low_complexity Low_complexity 1 28 0 1433 293 79 62 chr2 189975769 189976449 -63280134 - MER115 DNA AcHobo 0 693 2 206 32 32 0 chr2 189976736 189976767 -63279816 + (CACTG)n Simple_repeat Simple_repeat 3 34 0 352 239 53 80 chr2 189977520 189977633 -63278950 + L2 LINE L2 3193 3302 -11 320 233 0 14 chr2 189977787 189977860 -63278723 - MIR SINE MIR -125 137 66 21 82 0 0 chr2 189977900 189977949 -63278634 + AT_rich Low_complexity Low_complexity 1 49 0 451 312 26 32 chr2 189979510 189979699 -63276884 + MIR3 SINE MIR 14 201 -7 1588 162 9 89 chr2 189980584 189980911 -63275672 - AluJb SINE Alu -11 301 1 812 282 26 13 chr2 189982218 189982445 -63274138 + MIR SINE MIR 3 232 -30 316 258 189 0 chr2 189982459 189982591 -63273992 - MIR SINE MIR -86 176 20 202 329 71 12 chr2 189982620 189982705 -63273878 - L2 LINE L2 -60 3253 3164 3825 86 79 0 chr2 189983547 189984104 -63272479 + L1PA14 LINE L1 5558 6158 -3 922 224 6 17 chr2 189985873 189986052 -63270531 + MER58A DNA MER1_type 1 177 -47 2272 83 3 17 chr2 189986143 189986445 -63270138 + AluY SINE Alu 1 298 -13 883 113 27 0 chr2 189988324 189988474 -63268109 - L1MA5 LINE L1 -2 6298 6145 21 0 0 0 chr2 189988507 189988528 -63268055 + AT_rich Low_complexity Low_complexity 1 21 0 223 274 0 0 chr2 189988628 189988690 -63267893 + (TA)n Simple_repeat Simple_repeat 2 63 0 427 147 0 0 chr2 189990055 189990130 -63266453 - Alu SINE Alu 0 312 238 519 290 43 11 chr2 189992177 189992363 -63264220 - MLT1L LTR MaLR -2 613 422 262 250 0 0 chr2 189992461 189992521 -63264062 - MER53 DNA DNA -128 61 2 303 246 0 15 chr2 189992524 189992589 -63263994 - MLT1L LTR MaLR -191 424 361 238 261 59 81 chr2 189993528 189993750 -63262833 + L2 LINE L2 645 861 -2453 494 242 181 16 chr2 189994131 189994313 -63262270 + MIR SINE MIR 2 213 -49 425 165 22 0 chr2 189994758 189994849 -63261734 + (TATG)n Simple_repeat Simple_repeat 4 96 0 300 318 23 0 chr2 189994851 189994939 -63261644 - L1MC4 LINE L1 -1339 6703 6614 * 344 267 0 11 chr2 189994888 189994978 -63261605 + L1MC4 LINE L1 6615 6703 -1339 320 252 9 78 chr2 189994994 189995109 -63261474 + L1MC4 LINE L1 6614 6720 -1322 2343 288 78 6 chr2 189995394 189996231 -63260352 + L2 LINE L2 1838 2734 -580 227 372 89 6 chr2 189996347 189996527 -63260056 - L2 LINE L2 -1226 2088 1894 387 0 0 0 chr2 189996626 189996669 -63259914 + (CA)n Simple_repeat Simple_repeat 2 44 0 229 309 64 58 chr2 189996696 189996884 -63259699 + L2 LINE L2 2241 2429 -885 189 107 0 0 chr2 189999940 189999968 -63256615 + (GGA)n Simple_repeat Simple_repeat 2 29 0 281 241 139 0 chr2 190000021 190000100 -63256483 + L2 LINE L2 3224 3313 0 1467 178 138 0 chr2 190000545 190000849 -63255734 - MER7A DNA MER2_type 0 346 3 330 309 72 22 chr2 190000887 190001026 -63255557 + MIR3 SINE MIR 9 154 -54 602 226 119 44 chr2 190001171 190001397 -63255186 + MIR SINE MIR 6 248 -14 21 36 0 0 chr2 190002600 190002628 -63253955 + AT_rich Low_complexity Low_complexity 1 28 0 385 341 73 10 chr2 190005433 190005638 -63250945 - MIR SINE MIR -43 219 2 2231 100 3 3 chr2 190005713 190006014 -63250569 - AluSp SINE Alu -12 301 1 228 157 0 57 chr2 190008649 190008719 -63247864 + C-rich Low_complexity Low_complexity 5 70 0 21 36 0 0 chr2 190008735 190008763 -63247820 + GC_rich Low_complexity Low_complexity 1 28 0 197 333 95 0 chr2 190015039 190015123 -63241460 - L2 LINE L2 -1 3271 3180 273 57 0 0 chr2 190016187 190016222 -63240361 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 1385 211 42 28 chr2 190016478 190016762 -63239821 + AluJb SINE Alu 1 288 -24 217 191 21 0 chr2 190018619 190018666 -63237917 + (TA)n Simple_repeat Simple_repeat 2 49 0 400 282 45 18 chr2 190019704 190019814 -63236769 + MIR SINE MIR 2 114 -148 275 287 174 0 chr2 190020128 190020243 -63236340 - MIR SINE MIR -14 248 114 183 129 0 0 chr2 190020425 190020456 -63236127 + (TCCC)n Simple_repeat Simple_repeat 3 33 0 2117 123 13 3 chr2 190021973 190022273 -63234310 - AluSg SINE Alu -7 303 1 205 276 105 26 chr2 190023041 190023117 -63233466 - MIR3 SINE MIR -3 205 124 1844 157 10 7 chr2 190023382 190023688 -63232895 + AluJo SINE Alu 1 307 -5 22 0 0 0 chr2 190024371 190024393 -63232190 + AT_rich Low_complexity Low_complexity 1 22 0 914 107 14 14 chr2 190025014 190025154 -63231429 + AluJb SINE Alu 2 141 -171 25 31 0 0 chr2 190025171 190025203 -63231380 + AT_rich Low_complexity Low_complexity 1 32 0 190 107 0 0 chr2 190028309 190028337 -63228246 - MIR SINE MIR -83 125 98 185 172 17 121 chr2 190028707 190028765 -63227818 - MIR SINE MIR -89 173 122 217 242 194 0 chr2 190029131 190029193 -63227390 - L2 LINE L2 -50 3222 3149 28 29 0 0 chr2 190029489 190029524 -63227059 + AT_rich Low_complexity Low_complexity 1 35 0 2331 71 0 0 chr2 190029984 190030291 -63226292 - AluY SINE Alu 0 307 1 227 281 194 43 chr2 190031565 190032003 -63224580 - L2 LINE L2 -1562 1752 1249 181 279 0 0 chr2 190032884 190032927 -63223656 + L2 LINE L2 3227 3269 -3 215 189 337 53 chr2 190033286 190033381 -63223202 - L2 LINE L2 0 3272 3151 2086 104 35 0 chr2 190033677 190033964 -63222619 + AluSx SINE Alu 6 302 -10 2512 73 0 0 chr2 190034114 190034416 -63222167 + AluY SINE Alu 3 304 -7 23 0 0 0 chr2 190035291 190035314 -63221269 + AT_rich Low_complexity Low_complexity 1 23 0 2704 7 0 3 chr2 190036310 190036606 -63219977 - AluYa5 SINE Alu -16 295 1 540 150 0 0 chr2 190036778 190036858 -63219725 - FLAM SINE Alu -18 125 46 29 0 0 0 chr2 190036867 190036896 -63219687 + AT_rich Low_complexity Low_complexity 1 29 0 25 51 0 0 chr2 190038373 190038412 -63218171 + AT_rich Low_complexity Low_complexity 1 39 0 5210 30 7 0 chr2 190038791 190039401 -63217182 - L1PA4 LINE L1 -2 6153 5540 214 277 31 0 chr2 190039808 190039873 -63216710 - L2 LINE L2 -251 3062 2996 357 209 209 82 chr2 190041268 190041426 -63215157 - MER5A DNA MER1_type 0 189 12 451 227 67 40 chr2 190044053 190044203 -63212380 + MIR SINE MIR 107 260 -2 213 250 19 0 chr2 190044749 190044801 -63211782 + (TATG)n Simple_repeat Simple_repeat 1 53 0 1805 184 7 0 chr2 190046254 190046553 -63210030 - AluJb SINE Alu -11 301 1 4372 175 17 50 chr2 190046845 190047470 -63209113 - L1MB8 LINE L1 -8 6170 5610 2290 110 0 3 chr2 190047470 190047770 -63208813 - AluSc SINE Alu -10 299 1 4372 175 17 50 chr2 190047770 190048425 -63208158 - L1MB8 LINE L1 -568 5610 4935 301 200 0 33 chr2 190048536 190048596 -63207987 + L2 LINE L2 3255 3312 -1 1770 284 53 29 chr2 190048897 190049478 -63207105 + MLT1G1 LTR MaLR 1 595 0 600 325 20 22 chr2 190049479 190049934 -63206649 + MLT1G1-int LTR MaLR 2 575 -796 3358 187 63 1 chr2 190052407 190053055 -63203528 - MER44D DNA MER2_type -8 697 10 323 246 94 21 chr2 190053323 190053514 -63203069 - LTR37B LTR ERV1 0 468 264 34 42 0 0 chr2 190053983 190054031 -63202552 + AT_rich Low_complexity Low_complexity 1 48 0 2799 151 13 2 chr2 190054470 190054921 -63201662 - MER44D DNA MER2_type -1 604 277 186 71 0 0 chr2 190055368 190055396 -63201187 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 888 53 0 0 chr2 190056292 190056406 -63200177 + (TTTC)n Simple_repeat Simple_repeat 3 116 0 1228 189 8 34 chr2 190056417 190056655 -63199928 - AluJo SINE Alu -80 232 1 274 248 87 43 chr2 190056871 190057032 -63199551 - MLT1K LTR MaLR -35 553 386 1704 153 24 10 chr2 190057089 190057384 -63199199 - MSTA LTR MaLR -129 299 1 329 247 71 59 chr2 190059015 190059167 -63197416 - MIR SINE MIR -2 206 53 241 200 0 67 chr2 190059817 190059877 -63196706 + MIR SINE MIR 78 133 -129 322 185 98 0 chr2 190060337 190060429 -63196154 - MIR3 SINE MIR -14 194 94 198 171 24 0 chr2 190060542 190060583 -63196000 + L2 LINE L2 3205 3246 -26 374 0 22 0 chr2 190060688 190060734 -63195849 + (TAAA)n Simple_repeat Simple_repeat 3 49 0 1665 174 0 41 chr2 190060834 190061151 -63195432 + AluJo SINE Alu 2 305 -7 311 121 17 0 chr2 190061948 190062006 -63194577 + (CA)n Simple_repeat Simple_repeat 1 59 0 400 176 94 12 chr2 190062054 190062139 -63194444 + MER119 DNA MER1_type 42 133 -450 498 231 31 23 chr2 190062139 190062269 -63194314 + MER119 DNA MER1_type 453 583 0 296 278 11 0 chr2 190063450 190063540 -63193043 - L1ME4a LINE L1 -70 6051 5961 27 29 0 0 chr2 190063544 190063578 -63193005 + AT_rich Low_complexity Low_complexity 1 34 0 6110 45 6 24 chr2 190063613 190064406 -63192177 - L1PA7 LINE L1 -48 6106 5328 2100 135 10 0 chr2 190064762 190065059 -63191524 + AluSx SINE Alu 1 300 -12 598 319 21 13 chr2 190065741 190065979 -63190604 - LTR16A1 LTR ERVL 0 457 218 1752 240 85 24 chr2 190066282 190066857 -63189726 - L1ME3A LINE L1 -101 6069 5460 180 333 58 50 chr2 190068104 190068224 -63188359 - MIR3 SINE MIR -3 205 85 182 36 0 36 chr2 190068801 190068829 -63187754 + (TTCC)n Simple_repeat Simple_repeat 3 29 0 309 325 16 41 chr2 190070927 190071043 -63185540 + HAL1 LINE L1 1334 1448 -1059 2101 119 0 19 chr2 190071043 190071353 -63185230 + AluSg SINE Alu 1 304 -6 30 0 0 0 chr2 190071477 190071507 -63185076 + AT_rich Low_complexity Low_complexity 1 30 0 12376 164 11 16 chr2 190071507 190072382 -63184201 - L1MA3 LINE L1 -8 6297 5419 234 0 0 0 chr2 190072382 190072408 -63184175 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 2007 127 0 3 chr2 190072408 190072691 -63183892 - AluSx SINE Alu -30 282 1 12376 164 11 16 chr2 190072691 190075282 -63181301 - L1MA3 LINE L1 -884 5421 2849 300 175 0 0 chr2 190075321 190075384 -63181199 + CT-rich Low_complexity Low_complexity 4 66 0 505 198 143 4 chr2 190075409 190075647 -63180936 - AluSp SINE Alu -21 292 22 1412 234 14 11 chr2 190075960 190076331 -63180252 - L1 LINE L1 -2926 4639 4268 341 131 16 0 chr2 190076368 190076429 -63180154 + CT-rich Low_complexity Low_complexity 3 64 0 2213 128 3 0 chr2 190076437 190076749 -63179834 - AluSp SINE Alu 0 313 1 21936 141 34 14 chr2 190076749 190080902 -63175681 - L1 LINE L1 -3316 4249 8 427 279 32 13 chr2 190080897 190081055 -63175528 + HAL1 LINE L1 1577 1737 -770 * 29 0 0 0 chr2 190082571 190082600 -63173983 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 190083823 190083845 -63172738 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr2 190083932 190083952 -63172631 + (T)n Simple_repeat Simple_repeat 1 20 0 331 42 0 0 chr2 190084388 190084436 -63172147 - L1PA3 LINE L1 0 6155 6108 23 0 0 0 chr2 190084737 190084760 -63171823 + AT_rich Low_complexity Low_complexity 1 23 0 335 250 122 40 chr2 190084783 190084931 -63171652 - HAL1b LINE L1 0 1348 1189 204 268 24 12 chr2 190084932 190085014 -63171569 + (TATATG)n Simple_repeat Simple_repeat 3 85 0 195 42 0 0 chr2 190085202 190085226 -63171357 + (TTTA)n Simple_repeat Simple_repeat 4 27 0 247 189 0 0 chr2 190085322 190085375 -63171208 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 2133 133 13 0 chr2 190085591 190085899 -63170684 + AluSx SINE Alu 1 312 0 234 336 67 53 chr2 190085951 190086311 -63170272 + L2 LINE L2 1904 2268 -1046 277 98 24 0 chr2 190086381 190086422 -63170161 + Alu SINE Alu 7 48 -251 * 1086 225 36 20 chr2 190086421 190086670 -63169913 - MLT1G LTR MaLR -56 534 282 2192 152 29 0 chr2 190086670 190087018 -63169565 - THE1B LTR MaLR 0 364 7 1105 268 63 83 chr2 190087097 190087601 -63168982 - MLT1G LTR MaLR -101 489 15 582 254 10 28 chr2 190087610 190087757 -63168826 + MLT1G LTR MaLR 314 471 -124 216 282 0 0 chr2 190087757 190087828 -63168755 - MIR SINE MIR -56 206 136 286 372 47 33 chr2 190088089 190088304 -63168279 + L2 LINE L2 2556 2773 -541 234 288 17 0 chr2 190088305 190088364 -63168219 - MLT1G LTR MaLR -224 366 307 288 288 74 25 chr2 190088534 190088697 -63167886 - Charlie8 DNA MER1_type -2225 192 22 247 280 161 25 chr2 190088795 190088913 -63167670 + L2 LINE L2 3180 3313 0 2800 3 0 0 chr2 190089663 190089963 -63166620 - AluYa5 SINE Alu -11 300 1 189 108 108 0 chr2 190089981 190090018 -63166565 + L2 LINE L2 3273 3313 0 275 250 0 0 chr2 190090852 190090904 -63165679 + C-rich Low_complexity Low_complexity 4 55 0 890 277 64 4 chr2 190091956 190092191 -63164392 + MIR SINE MIR 14 262 0 198 256 0 141 chr2 190092369 190092447 -63164136 + L2 LINE L2 3247 3313 0 253 324 15 0 chr2 190092565 190092633 -63163950 - L2 LINE L2 -216 3056 2988 280 308 64 4 chr2 190092887 190093073 -63163510 - MIR SINE MIR 0 262 6 541 304 10 44 chr2 190093980 190094184 -63162399 - MIR3 SINE MIR -9 199 3 22 35 0 0 chr2 190095272 190095301 -63161282 + AT_rich Low_complexity Low_complexity 1 29 0 251 347 65 8 chr2 190098079 190098203 -63158380 - MIR SINE MIR -119 143 13 346 230 58 100 chr2 190098781 190098871 -63157712 + MIR SINE MIR 16 108 -154 2224 59 10 19 chr2 190098871 190099178 -63157405 - AluY SINE Alu -7 304 1 346 230 58 100 chr2 190099178 190099286 -63157297 + MIR SINE MIR 108 216 -46 247 366 84 15 chr2 190100785 190100987 -63155596 - L3b LINE CR1 -13 1570 1355 181 380 30 30 chr2 190104035 190104135 -63152448 + MIR SINE MIR 12 111 -151 2522 62 0 0 chr2 190105683 190105989 -63150594 + AluY SINE Alu 1 306 -5 239 317 10 30 chr2 190106573 190106674 -63149909 + L2 LINE L2 2396 2494 -820 184 374 55 0 chr2 190108736 190108827 -63147756 + L2 LINE L2 2968 3063 -209 2227 224 10 24 chr2 190108871 190109379 -63147204 - LTR31 LTR ERV1 -15 604 104 31 26 0 0 chr2 190111245 190111283 -63145300 + AT_rich Low_complexity Low_complexity 1 38 0 254 28 0 28 chr2 190112423 190112459 -63144124 + (TG)n Simple_repeat Simple_repeat 2 36 0 21 0 0 0 chr2 190112489 190112510 -63144073 + AT_rich Low_complexity Low_complexity 1 21 0 528 398 30 6 chr2 190112658 190113022 -63143561 - L3 LINE CR1 -66 1511 1139 234 188 234 0 chr2 190113056 190113120 -63143463 - L2 LINE L2 -1 3312 3234 535 262 124 14 chr2 190114496 190114706 -63141877 + MIR SINE MIR 3 235 -27 281 400 47 7 chr2 190115798 190115948 -63140635 + MIR3 SINE MIR 47 202 -6 2469 63 0 19 chr2 190116516 190116833 -63139750 + AluY SINE Alu 1 311 0 231 311 0 0 chr2 190116984 190117045 -63139538 + MIR3 SINE MIR 143 203 -5 16151 159 24 13 chr2 190117269 190123860 -63132723 - L1MA3 LINE L1 0 7710 1004 2294 115 43 0 chr2 190123860 190124208 -63132375 + THE1B LTR MaLR 2 364 0 16151 159 24 13 chr2 190124208 190125212 -63131371 - L1MA3 LINE L1 -6706 1004 12 231 286 130 0 chr2 190126326 190126403 -63130180 - L2 LINE L2 0 3313 3227 21 36 0 0 chr2 190127742 190127770 -63128813 + AT_rich Low_complexity Low_complexity 1 28 0 441 298 38 0 chr2 190128357 190128488 -63128095 - MIR SINE MIR -113 149 14 254 321 155 4 chr2 190129606 190129858 -63126725 + L2 LINE L2 1834 2123 -1191 2346 86 10 0 chr2 190130059 190130361 -63126222 - AluSc SINE Alu -4 305 1 21 36 0 0 chr2 190130871 190130899 -63125684 + AT_rich Low_complexity Low_complexity 1 28 0 188 271 68 0 chr2 190130983 190131042 -63125541 - L2 LINE L2 -4 3268 3206 210 215 15 77 chr2 190131431 190131496 -63125087 - L3 LINE CR1 -2 1575 1515 24 0 0 0 chr2 190132339 190132363 -63124220 + AT_rich Low_complexity Low_complexity 1 24 0 1574 174 3 57 chr2 190132365 190132663 -63123920 - AluJo SINE Alu -21 291 10 585 266 149 19 chr2 190132724 190133315 -63123268 + HAL1b LINE L1 420 1087 -261 1719 139 12 4 chr2 190133342 190133629 -63122954 + AluSx SINE Alu 32 320 0 26 50 0 0 chr2 190133661 190133701 -63122882 + AT_rich Low_complexity Low_complexity 1 40 0 431 224 0 40 chr2 190133701 190133826 -63122757 + L1PB4 LINE L1 6034 6153 -3 243 0 0 0 chr2 190133911 190133938 -63122645 + (TTA)n Simple_repeat Simple_repeat 2 28 0 18046 29 0 1 chr2 190133944 190136881 -63119702 - L1PA2 LINE L1 0 6155 3220 1350 217 0 24 chr2 190137397 190137687 -63118896 - AluJo SINE Alu -1 311 29 3031 80 0 0 chr2 190137787 190138239 -63118344 + L1P LINE L1 2797 3248 -2898 525 144 34 51 chr2 190138513 190138631 -63117952 + MER20 DNA MER1_type 1 116 -103 * 712 205 36 0 chr2 190138624 190138790 -63117793 - MLT1A1 LTR MaLR -193 172 1 196 304 108 0 chr2 190138797 190138899 -63117684 - MIR SINE MIR -113 149 37 24 0 0 0 chr2 190139258 190139282 -63117301 + AT_rich Low_complexity Low_complexity 1 24 0 201 175 0 0 chr2 190140786 190140826 -63115757 + (TG)n Simple_repeat Simple_repeat 1 40 0 2438 137 8 0 chr2 190141687 190142123 -63114460 - MER1A DNA MER1_type 0 529 49 474 313 85 70 chr2 190143183 190143733 -63112850 + L2 LINE L2 2702 3270 -43 226 262 48 96 chr2 190145324 190145511 -63111072 + MLT1H LTR MaLR 223 400 -149 582 231 43 0 chr2 190145709 190145826 -63110757 + FLAM_A SINE Alu 1 122 -11 180 0 0 0 chr2 190145829 190145849 -63110734 + (TTAA)n Simple_repeat Simple_repeat 2 21 0 474 289 176 48 chr2 190146212 190146569 -63110014 - L2 LINE L2 0 3313 2911 318 26 0 0 chr2 190146764 190146803 -63109780 + (CA)n Simple_repeat Simple_repeat 2 40 0 1743 167 0 33 chr2 190146981 190147281 -63109302 + AluJo SINE Alu 1 290 -22 592 161 34 0 chr2 190147490 190147608 -63108975 + AluSg1 SINE Alu 11 132 -177 2602 239 32 40 chr2 190148707 190149072 -63107511 - L1ME2 LINE L1 -1 6163 5797 2331 68 7 3 chr2 190149072 190149365 -63107218 + AluY SINE Alu 1 294 -17 2602 239 32 40 chr2 190149365 190149693 -63106890 - L1ME2 LINE L1 -367 5797 5468 2078 157 76 25 chr2 190149693 190150100 -63106483 - MSTA LTR MaLR 0 428 1 2602 239 32 40 chr2 190150100 190150145 -63106438 - L1ME2 LINE L1 -696 5468 5424 1948 130 21 53 chr2 190150145 190150521 -63106062 + THE1B LTR MaLR 1 364 0 10949 106 27 2 chr2 190150521 190152063 -63104520 + THE1B-int LTR MaLR 1 1580 0 2011 118 32 59 chr2 190152063 190152437 -63104146 + THE1B LTR MaLR 1 364 0 2602 239 32 40 chr2 190152437 190152957 -63103626 - L1ME2 LINE L1 -737 5427 4920 1570 156 35 39 chr2 190155128 190155432 -63101151 + AluJo SINE Alu 1 303 0 2417 92 0 6 chr2 190157007 190157321 -63099262 - AluSx SINE Alu 0 312 1 225 309 36 46 chr2 190157418 190157612 -63098971 + L2 LINE L2 1800 1991 -1323 599 251 101 23 chr2 190158324 190158543 -63098040 - MIR SINE MIR -6 256 21 857 274 26 51 chr2 190158701 190159233 -63097350 + L1MC5 LINE L1 7393 7911 -50 471 170 10 10 chr2 190159261 190159361 -63097222 + L1MA10 LINE L1 6222 6321 -13 29 28 0 0 chr2 190159466 190159502 -63097081 + AT_rich Low_complexity Low_complexity 1 36 0 339 352 84 17 chr2 190162090 190162269 -63094314 + L3 LINE CR1 1337 1527 -50 24 0 0 0 chr2 190162483 190162507 -63094076 + AT_rich Low_complexity Low_complexity 1 24 0 225 0 0 0 chr2 190162714 190162739 -63093844 + (T)n Simple_repeat Simple_repeat 1 25 0 2487 62 0 7 chr2 190163962 190164267 -63092316 - AluY SINE Alu -8 303 1 22 56 0 0 chr2 190164393 190164429 -63092154 + AT_rich Low_complexity Low_complexity 1 36 0 2155 110 0 0 chr2 190165387 190165701 -63090882 + AluSg SINE Alu 1 314 0 1409 262 55 17 chr2 190166044 190166518 -63090065 + MLT1E2 LTR MaLR 135 626 0 33 56 0 0 chr2 190167319 190167373 -63089210 + AT_rich Low_complexity Low_complexity 1 54 0 1994 244 11 46 chr2 190167456 190168017 -63088566 + L1M3e LINE L1 466 1006 -6483 2769 276 49 19 chr2 190168029 190168314 -63088269 + L1M3e LINE L1 2008 2283 -5282 288 0 0 0 chr2 190168314 190168346 -63088237 + (TAA)n Simple_repeat Simple_repeat 2 33 0 2769 276 49 19 chr2 190168346 190169538 -63087045 + L1M3e LINE L1 2283 3529 -4036 185 0 40 0 chr2 190169538 190169563 -63087020 + (GAAA)n Simple_repeat Simple_repeat 1 26 0 590 0 175 0 chr2 190169564 190169684 -63086899 + CT-rich Low_complexity Low_complexity 5 145 0 2995 41 39 17 chr2 190169684 190170095 -63086488 + SVA Other Other 1 420 -966 371 361 31 0 chr2 190170324 190170454 -63086129 + MIR SINE MIR 2 135 -127 31 20 0 20 chr2 190171371 190171385 -63085198 + AT_rich Low_complexity Low_complexity 1 14 -34 1994 155 7 0 chr2 190171385 190171676 -63084907 - AluSx SINE Alu -19 293 1 31 20 0 20 chr2 190171676 190171710 -63084873 + AT_rich Low_complexity Low_complexity 14 48 0 353 326 77 36 chr2 190173262 190173458 -63083125 - MIR SINE MIR -38 224 21 4438 94 11 5 chr2 190173759 190174400 -63082183 + L1PA13 LINE L1 5519 6163 0 2805 36 0 0 chr2 190174400 190174756 -63081827 - L1P LINE L1 -800 5346 4991 1142 66 24 36 chr2 190174756 190174919 -63081664 + L1PA3 LINE L1 5989 6152 -3 41 0 0 0 chr2 190174919 190174960 -63081623 + AT_rich Low_complexity Low_complexity 1 41 0 4715 162 40 11 chr2 190175166 190176084 -63080499 - L1PB4 LINE L1 -1 6155 5210 304 336 31 8 chr2 190177352 190177480 -63079103 + L2 LINE L2 3179 3309 -4 446 246 41 23 chr2 190177504 190177675 -63078908 - L1M4 LINE L1 -2085 4061 3888 15473 133 12 10 chr2 190177675 190180080 -63076503 + Tigger1 DNA MER2_type 6 2417 -1 1394 273 52 36 chr2 190180083 190180717 -63075866 - L1M4 LINE L1 -2254 3892 3249 200 167 39 13 chr2 190180746 190180824 -63075759 + CT-rich Low_complexity Low_complexity 4 83 0 188 196 152 0 chr2 190181421 190181467 -63075116 - MIR3 SINE MIR -49 159 107 250 291 25 13 chr2 190181926 190182005 -63074578 - L2 LINE L2 -1 3312 3233 27 0 0 0 chr2 190182456 190182483 -63074100 + AT_rich Low_complexity Low_complexity 1 27 0 326 325 26 0 chr2 190182928 190183042 -63073541 - L2 LINE L2 -4 3309 3193 1017 158 23 22 chr2 190183042 190183279 -63073304 + MER31A LTR ERV1 191 433 -33 1130 211 4 35 chr2 190183417 190183677 -63072906 + MER31A LTR ERV1 234 485 0 2239 103 7 0 chr2 190184615 190184925 -63071658 - AluSx SINE Alu 0 312 1 25 31 0 0 chr2 190185047 190185079 -63071504 + AT_rich Low_complexity Low_complexity 1 32 0 310 203 0 43 chr2 190185498 190185567 -63071016 - L1MC4 LINE L1 -1339 6703 6638 2201 29 44 0 chr2 190185568 190185840 -63070743 - L1PA5 LINE L1 -2 6152 5869 580 308 70 35 chr2 190185907 190186248 -63070335 + MLT1K LTR MaLR 214 566 -22 372 268 167 0 chr2 190186770 190186908 -63069675 - MER103 DNA DNA -2 164 4 573 100 0 0 chr2 190186990 190187070 -63069513 - MADE1 DNA Mariner 0 80 1 679 171 0 32 chr2 190187345 190187468 -63069115 + FLAM_A SINE Alu 4 122 -11 240 189 19 38 chr2 190187967 190188020 -63068563 - L2 LINE L2 -16 3297 3246 338 284 18 28 chr2 190189444 190189553 -63067030 + L2 LINE L2 3184 3291 -22 191 245 41 0 chr2 190190331 190190380 -63066203 - MIR3 SINE MIR -3 205 155 1294 261 140 28 chr2 190190833 190191518 -63065065 + MER20B DNA MER1_type 1 762 -21 612 235 10 61 chr2 190191522 190191718 -63064865 - MER5A DNA MER1_type 0 189 4 13870 29 8 0 chr2 190191968 190194402 -63062181 - L1PA4 LINE L1 -4 6151 3704 188 360 13 0 chr2 190195906 190195981 -63060602 + L2 LINE L2 3215 3290 -23 31 58 0 0 chr2 190196279 190196331 -63060252 + AT_rich Low_complexity Low_complexity 1 52 0 2743 10 0 3 chr2 190196484 190196787 -63059796 - AluYa5 SINE Alu -9 302 1 23 33 0 0 chr2 190196791 190196821 -63059762 + AT_rich Low_complexity Low_complexity 1 30 0 337 239 11 33 chr2 190197753 190197845 -63058738 - MIR SINE MIR -3 259 170 22 0 0 0 chr2 190197953 190197975 -63058608 + AT_rich Low_complexity Low_complexity 1 22 0 342 347 8 0 chr2 190198031 190198152 -63058431 - MIR SINE MIR -88 174 53 278 182 15 0 chr2 190198527 190198593 -63057990 + CT-rich Low_complexity Low_complexity 1 67 0 375 60 0 0 chr2 190198793 190198843 -63057740 + (TG)n Simple_repeat Simple_repeat 1 50 0 207 306 71 0 chr2 190198983 190199068 -63057515 + MIR3 SINE MIR 117 207 -1 222 37 0 0 chr2 190200055 190200082 -63056501 + (TTAA)n Simple_repeat Simple_repeat 4 30 0 252 59 0 0 chr2 190200731 190200765 -63055818 + (TG)n Simple_repeat Simple_repeat 2 35 0 544 332 4 35 chr2 190200893 190201119 -63055464 - MIR SINE MIR -24 238 20 541 236 0 0 chr2 190203134 190203240 -63053343 - L1MC4a LINE L1 -1084 6724 6619 195 42 0 0 chr2 190203240 190203264 -63053319 + (GA)n Simple_repeat Simple_repeat 1 24 0 1712 155 125 53 chr2 190203810 190203881 -63052702 - MSTA LTR MaLR 0 428 364 2354 100 3 0 chr2 190203881 190204191 -63052392 + AluSp SINE Alu 1 311 -2 1712 155 125 53 chr2 190204191 190204518 -63052065 - MSTA LTR MaLR -64 364 1 28 29 0 0 chr2 190204555 190204590 -63051993 + AT_rich Low_complexity Low_complexity 1 35 0 22 70 0 0 chr2 190205278 190205321 -63051262 + AT_rich Low_complexity Low_complexity 1 43 0 1993 235 150 19 chr2 190205377 190206505 -63050078 - L1MC4 LINE L1 -262 7780 6462 27 49 0 0 chr2 190206516 190206557 -63050026 + AT_rich Low_complexity Low_complexity 1 41 0 2235 141 25 0 chr2 190206575 190206930 -63049653 + THE1B LTR MaLR 1 364 0 312 337 82 45 chr2 190206938 190207181 -63049402 + L1M4 LINE L1 4674 4925 -1221 735 340 95 50 chr2 190208225 190209171 -63047412 + L2 LINE L2 1871 2859 -455 27 81 0 0 chr2 190209424 190209486 -63047097 + AT_rich Low_complexity Low_complexity 1 62 0 259 351 0 0 chr2 190209780 190209857 -63046726 + L3 LINE CR1 1500 1576 -1 242 271 94 31 chr2 190210254 190210350 -63046233 + MIR SINE MIR 131 232 -30 457 382 50 17 chr2 190210999 190211240 -63045343 + MIR SINE MIR 2 250 -12 891 215 143 60 chr2 190213203 190213538 -63043045 + MLT1A1 LTR MaLR 1 363 -2 318 300 163 26 chr2 190213910 190214143 -63042440 - L2 LINE L2 -245 3068 2804 267 239 261 11 chr2 190215295 190215387 -63041196 - L2 LINE L2 0 3272 3158 321 68 0 0 chr2 190215420 190215464 -63041119 + (CAA)n Simple_repeat Simple_repeat 2 45 0 516 233 0 17 chr2 190215666 190215782 -63040801 - MIR3 SINE MIR -1 207 94 265 306 12 47 chr2 190216125 190216210 -63040373 + MIR SINE MIR 1 82 -180 180 0 0 0 chr2 190216742 190216762 -63039821 + (T)n Simple_repeat Simple_repeat 1 20 0 7846 13 2 0 chr2 190216766 190217767 -63038816 - L1HS LINE L1 -2 6153 5150 21 36 0 0 chr2 190218529 190218557 -63038026 + AT_rich Low_complexity Low_complexity 1 28 0 449 354 17 11 chr2 190219568 190219749 -63036834 - MIR3 SINE MIR -5 203 22 26 0 0 0 chr2 190221987 190222013 -63034570 + AT_rich Low_complexity Low_complexity 1 26 0 2069 121 10 3 chr2 190223638 190223935 -63032648 + AluSx SINE Alu 1 299 -13 212 107 53 40 chr2 190227811 190227886 -63028697 + (TTATA)n Simple_repeat Simple_repeat 1 76 0 277 250 0 16 chr2 190228023 190228087 -63028496 - Charlie8 DNA MER1_type -1000 1417 1355 1403 104 0 0 chr2 190228377 190228559 -63028024 + AluSg/x SINE Alu 131 312 0 348 318 98 37 chr2 190228678 190228892 -63027691 - L3 LINE CR1 -109 1468 1242 22 35 0 0 chr2 190229827 190229856 -63026727 + AT_rich Low_complexity Low_complexity 1 29 0 537 298 21 7 chr2 190230382 190230523 -63026060 + MER5B DNA MER1_type 1 143 -35 277 120 250 54 chr2 190230978 190231070 -63025513 - MER103 DNA DNA -10 156 47 22 35 0 0 chr2 190231707 190231736 -63024847 + AT_rich Low_complexity Low_complexity 1 29 0 213 214 34 0 chr2 190231775 190231823 -63024760 - MIR SINE MIR -42 166 112 230 231 0 0 chr2 190234035 190234087 -63022496 + (CA)n Simple_repeat Simple_repeat 1 52 0 226 280 75 0 chr2 190234097 190234190 -63022393 + MER103 DNA DNA 67 166 0 24 32 0 0 chr2 190234506 190234537 -63022046 + AT_rich Low_complexity Low_complexity 1 31 0 224 345 60 60 chr2 190234721 190234970 -63021613 + L2 LINE L2 2839 3087 -185 565 292 79 11 chr2 190235102 190235280 -63021303 - MIR3 SINE MIR -4 204 15 397 304 209 5 chr2 190235317 190235518 -63021065 - MIR SINE MIR 0 262 21 1795 213 108 99 chr2 190235649 190235760 -63020823 + L1ME3A LINE L1 5404 5512 -658 837 234 62 14 chr2 190235760 190235805 -63020778 - MER20 DNA MER1_type 0 219 178 2198 97 4 0 chr2 190235805 190236084 -63020499 - AluSg SINE Alu -13 297 18 837 234 62 14 chr2 190236084 190236247 -63020336 - MER20 DNA MER1_type -41 178 1 1795 213 108 99 chr2 190236247 190236655 -63019928 + L1ME3A LINE L1 5512 5980 -190 232 170 0 0 chr2 190236655 190236702 -63019881 - U5 snRNA snRNA -69 47 1 1795 213 108 99 chr2 190236702 190236891 -63019692 + L1ME3A LINE L1 5980 6166 -4 1626 191 0 50 chr2 190237489 190237810 -63018773 - AluJb SINE Alu 0 306 1 25 0 0 0 chr2 190238045 190238070 -63018513 + AT_rich Low_complexity Low_complexity 1 25 0 415 264 43 64 chr2 190238349 190238489 -63018094 + L2 LINE L2 3171 3307 -6 350 206 80 109 chr2 190238845 190239020 -63017563 + MIR3 SINE MIR 12 181 -27 413 311 139 5 chr2 190239387 190239596 -63016987 - MIR SINE MIR -1 261 25 843 186 18 149 chr2 190239802 190240130 -63016453 + MER97b DNA MER1_type? 113 397 -656 2078 131 3 0 chr2 190240199 190240497 -63016086 + AluSx SINE Alu 1 299 -13 397 284 50 66 chr2 190240973 190241290 -63015293 + MER97c DNA MER1_type? 776 1087 -3 425 241 38 30 chr2 190241694 190241827 -63014756 + MIR SINE MIR 129 262 0 33 35 0 17 chr2 190241933 190241966 -63014617 + AT_rich Low_complexity Low_complexity 1 34 -23 1413 154 48 17 chr2 190241966 190242258 -63014325 - L1MA7 LINE L1 0 6291 5991 33 35 0 17 chr2 190242258 190242282 -63014301 + AT_rich Low_complexity Low_complexity 34 57 0 4640 129 36 16 chr2 190242676 190243502 -63013081 + Tigger3b DNA MER2_type 1 843 -388 12853 93 5 4 chr2 190243884 190244258 -63012325 - L1PA7 LINE L1 -2 6152 5780 2595 33 3 0 chr2 190244258 190244559 -63012024 - AluY SINE Alu -9 302 1 12853 93 5 4 chr2 190244559 190246811 -63009772 - L1PA7 LINE L1 -374 5780 3532 429 283 84 44 chr2 190247892 190248211 -63008372 + L1MC4a LINE L1 5582 5920 -246 497 236 25 74 chr2 190248446 190248649 -63007934 + L1ME1 LINE L1 5956 6148 -18 231 374 12 0 chr2 190248872 190248955 -63007628 - MIR SINE MIR -101 161 78 392 110 0 55 chr2 190248979 190249052 -63007531 + L1PA8 LINE L1 6104 6172 0 231 294 73 44 chr2 190250025 190250161 -63006422 - L2 LINE L2 0 3313 3174 355 240 58 19 chr2 190250418 190250522 -63006061 + HsTC2 DNA Tc2 14 121 -1777 280 224 0 0 chr2 190250525 190250583 -63006000 + MER116 DNA Mariner 4 61 -19 1356 268 36 7 chr2 190250594 190251012 -63005571 + HsTC2 DNA Tc2 131 560 -1338 708 186 93 6 chr2 190251013 190251035 -63005548 - Ricksha DNA DNA -2878 368 333 2862 88 2 10 chr2 190251035 190251432 -63005151 - HERVL-A2 LTR ERVL 0 5654 5261 * 25975 101 36 25 chr2 190251431 190253370 -63003213 - HERVL-A2 LTR ERVL -1747 3907 1991 2386 112 5 37 chr2 190253370 190253746 -63002837 + THE1B LTR MaLR 1 364 0 10425 97 14 60 chr2 190253746 190255402 -63001181 + THE1B-int LTR MaLR 1 1580 0 2448 122 0 16 chr2 190255402 190255772 -63000811 + THE1B LTR MaLR 1 364 0 25975 101 36 25 chr2 190255772 190257694 -62998889 - HERVL-A2 LTR ERVL -3662 1992 1 2008 174 52 38 chr2 190257694 190258239 -62998344 - MLT2A2 LTR ERVL 0 554 1 295 164 0 41 chr2 190258240 190258313 -62998270 - L1M2 LINE L1 -800 5491 5422 835 133 76 41 chr2 190258340 190258603 -62997980 - L1M2 LINE L1 -743 5403 5181 1658 124 0 4 chr2 190258603 190258862 -62997721 + HSMAR2 DNA Mariner 1043 1300 -2 4730 203 57 10 chr2 190258864 190260089 -62996494 - L1M1 LINE L1 -2781 4784 3498 2101 151 3 0 chr2 190260089 190260401 -62996182 - AluSq SINE Alu 0 313 1 4730 203 57 10 chr2 190260401 190260441 -62996142 - L1M1 LINE L1 -4067 3498 3461 6787 91 14 13 chr2 190260442 190261695 -62994888 - SVA Other Other -723 1386 364 279 0 0 0 chr2 190261907 190261938 -62994645 + (T)n Simple_repeat Simple_repeat 1 31 0 944 315 41 19 chr2 190262737 190263105 -62993478 + L2 LINE L2 2864 3239 -74 4269 79 17 2 chr2 190263178 190263759 -62992824 - L1PA13 LINE L1 -8 6155 5566 476 229 10 0 chr2 190263849 190263945 -62992638 - MER81 DNA DNA -13 101 5 240 272 214 10 chr2 190264258 190264361 -62992222 + MIR SINE MIR 21 144 -64 364 254 25 8 chr2 190265084 190265202 -62991381 + L1MA4A LINE L1 6180 6299 -4 336 303 83 87 chr2 190265206 190265460 -62991123 + MIR SINE MIR 10 262 0 * 418 248 30 10 chr2 190265447 190265548 -62991035 - MIR SINE MIR -105 157 55 729 205 168 45 chr2 190265604 190265848 -62990735 + ORSL DNA AcHobo 1 274 -1 418 113 9 47 chr2 190267362 190267468 -62989115 + (GGAA)n Simple_repeat Simple_repeat 4 105 0 878 282 4 4 chr2 190267481 190267740 -62988843 + MIR SINE MIR 2 260 -2 189 0 0 0 chr2 190268805 190268826 -62987757 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 218 359 0 11 chr2 190269063 190269155 -62987428 + CT-rich Low_complexity Low_complexity 2 92 0 1481 144 58 40 chr2 190269189 190269215 -62987368 - AluSx SINE Alu -2 310 286 3638 45 0 0 chr2 190269215 190269657 -62986926 - L1PA5 LINE L1 -6 6148 5707 1481 144 58 40 chr2 190269657 190269907 -62986676 - AluSx SINE Alu -26 286 29 24 85 0 0 chr2 190269957 190270016 -62986567 + AT_rich Low_complexity Low_complexity 1 59 0 512 167 0 0 chr2 190270156 190270234 -62986349 - AluJ/FLAM SINE Alu -228 84 7 50 0 0 0 chr2 190270963 190271013 -62985570 + AT_rich Low_complexity Low_complexity 1 50 0 542 201 14 58 chr2 190272177 190272316 -62984267 - MLT1I LTR MaLR -8 401 269 21 57 0 0 chr2 190272713 190272748 -62983835 + AT_rich Low_complexity Low_complexity 1 35 0 235 253 0 35 chr2 190273809 190273896 -62982687 + CT-rich Low_complexity Low_complexity 1 84 0 1864 207 38 25 chr2 190273931 190274375 -62982208 - LTR40c LTR ERVL -12 453 4 274 322 121 20 chr2 190275574 190275723 -62980860 + MER115 DNA AcHobo 1 164 -529 853 200 56 0 chr2 190275744 190275924 -62980659 + MER45B DNA AcHobo 851 1040 0 1458 216 159 41 chr2 190276006 190276497 -62980086 + L1ME3A LINE L1 5622 6170 0 976 79 0 0 chr2 190276621 190276747 -62979836 - AluSc SINE Alu -9 300 175 325 320 31 16 chr2 190279514 190279642 -62976941 + MIR SINE MIR 24 153 -109 1070 288 213 21 chr2 190280353 190281323 -62975260 - L2 LINE L2 -4 3309 2158 195 42 0 0 chr2 190281623 190281647 -62974936 + (TG)n Simple_repeat Simple_repeat 1 24 0 209 119 24 0 chr2 190281647 190281689 -62974894 + GA-rich Low_complexity Low_complexity 2 44 0 1908 150 7 7 chr2 190282241 190282535 -62974048 + AluJb SINE Alu 16 309 -3 2249 103 0 0 chr2 190283694 190283996 -62972587 - AluY SINE Alu -9 302 1 445 139 58 0 chr2 190284041 190284127 -62972456 + L1PA13 LINE L1 6073 6163 0 1571 183 0 47 chr2 190284328 190284645 -62971938 + AluJo SINE Alu 1 302 -10 188 325 77 60 chr2 190285089 190285206 -62971377 + MIR SINE MIR 30 148 -60 315 307 31 47 chr2 190285443 190285570 -62971013 - MIR3 SINE MIR -23 185 61 233 261 159 11 chr2 190286588 190286676 -62969907 + MER5B DNA MER1_type 78 178 0 2007 125 4 0 chr2 190287578 190287886 -62968697 + AluSg SINE Alu 1 309 0 469 272 112 18 chr2 190288048 190288217 -62968366 - MIR SINE MIR -50 212 28 194 343 9 38 chr2 190289304 190289409 -62967174 - MIR SINE MIR -13 249 148 25 0 0 0 chr2 190289416 190289441 -62967142 + AT_rich Low_complexity Low_complexity 1 25 0 1344 57 6 0 chr2 190289441 190289616 -62966967 - L1PA8A LINE L1 -28 6103 5928 21483 98 5 4 chr2 190289636 190292094 -62964489 - L1PA7 LINE L1 -15 6139 3675 318 50 0 0 chr2 190292094 190292134 -62964449 + (TG)n Simple_repeat Simple_repeat 2 41 0 21483 98 5 4 chr2 190292134 190293580 -62963003 - L1PA7 LINE L1 -2479 3675 2232 8548 142 13 30 chr2 190293591 190295119 -62961464 + L1PA7 LINE L1 717 2218 -3928 303 229 16 0 chr2 190295133 190295194 -62961389 - MIR SINE MIR -115 147 86 322 209 0 81 chr2 190295225 190295311 -62961272 + MIR SINE MIR 70 148 -114 2205 108 0 7 chr2 190296043 190296340 -62960243 - AluSx SINE Alu -17 295 1 860 340 21 61 chr2 190296416 190296710 -62959873 - L2 LINE L2 -5 3308 3039 2185 104 3 7 chr2 190296710 190297017 -62959566 + AluSq SINE Alu 1 306 -7 860 340 21 61 chr2 190297017 190297199 -62959384 - L2 LINE L2 -274 3039 2851 2796 284 128 24 chr2 190297588 190299367 -62957216 + L2 LINE L2 616 3311 -2 3494 173 102 58 chr2 190299668 190300470 -62956113 - L1MB4 LINE L1 -4 6176 5290 1982 146 0 3 chr2 190300470 190300765 -62955818 - AluSx SINE Alu -18 294 1 3494 173 102 58 chr2 190300765 190301112 -62955471 - L1MB4 LINE L1 -890 5290 4960 279 289 321 0 chr2 190301341 190301528 -62955055 + MIR SINE MIR 6 252 -10 2330 113 58 3 chr2 190303778 190304123 -62952460 - THE1B LTR MaLR 0 364 1 515 330 102 0 chr2 190304168 190304374 -62952209 - MIR SINE MIR -24 238 12 197 259 0 19 chr2 190304445 190304499 -62952084 - MIR3 SINE MIR -3 205 153 22 0 0 0 chr2 190307037 190307059 -62949524 + AT_rich Low_complexity Low_complexity 1 22 0 262 291 86 10 chr2 190308308 190308432 -62948151 + MIR SINE MIR 19 150 -63 237 211 19 19 chr2 190308971 190309023 -62947560 + L2 LINE L2 3259 3310 -3 345 331 22 19 chr2 190309878 190310020 -62946563 + MIR SINE MIR 12 153 -66 242 176 20 0 chr2 190311050 190311101 -62945482 + L2 LINE L2 3262 3313 0 1882 238 29 81 chr2 190311543 190311843 -62944740 - L1ME1 LINE L1 -4 6162 5848 1536 145 137 0 chr2 190311843 190312098 -62944485 - 7SLRNA srpRNA srpRNA -10 310 21 1882 238 29 81 chr2 190312098 190312527 -62944056 - L1ME1 LINE L1 -318 5848 5471 550 232 62 54 chr2 190312808 190312972 -62943611 + L1ME1 LINE L1 4076 4244 -1902 2170 116 0 0 chr2 190312972 190313264 -62943319 - AluSx SINE Alu -20 292 1 550 232 62 54 chr2 190313264 190313323 -62943260 + L1ME1 LINE L1 4244 4301 -1845 3499 204 59 40 chr2 190313329 190315060 -62941523 + L1ME1 LINE L1 4383 6184 0 860 253 22 66 chr2 190315367 190315640 -62940943 - MLT1J2 LTR MaLR -189 261 1 807 143 0 14 chr2 190318381 190318521 -62938062 - L1M2 LINE L1 -684 5607 5470 751 223 119 16 chr2 190318526 190318719 -62937864 - AluJo SINE Alu -14 298 86 3618 165 36 9 chr2 190318720 190318808 -62937775 - L1M2 LINE L1 -743 5403 5319 1600 204 69 19 chr2 190318808 190319185 -62937398 - MSTD LTR MaLR 0 396 1 3618 165 36 9 chr2 190319185 190319895 -62936688 - L1M2 LINE L1 -827 5319 4655 216 0 0 0 chr2 190319895 190319919 -62936664 + (TG)n Simple_repeat Simple_repeat 1 24 0 3618 165 36 9 chr2 190319919 190319974 -62936609 - L1M2 LINE L1 -1491 4655 4603 960 128 7 0 chr2 190319979 190320127 -62936456 + L1MA7 LINE L1 5572 5720 -571 2707 169 6 4 chr2 190320134 190320638 -62935945 + L1MA7 LINE L1 5775 6279 -12 482 232 81 0 chr2 190320908 190321007 -62935576 + MER58A DNA MER1_type 1 107 0 1040 256 17 59 chr2 190321144 190321433 -62935150 - LTR16C LTR ERVL 0 491 215 14370 124 26 30 chr2 190321435 190322213 -62934370 + Tigger1 DNA MER2_type 65 845 -1573 1911 92 65 0 chr2 190322213 190322511 -62934072 + AluSc SINE Alu 1 315 0 14370 124 26 30 chr2 190322511 190324093 -62932490 + Tigger1 DNA MER2_type 845 2416 -2 569 308 19 0 chr2 190324098 190324257 -62932326 - LTR16C LTR ERVL -292 199 38 694 352 58 48 chr2 190324418 190325454 -62931129 - HERV16 LTR ERVL -383 5381 4293 763 377 48 11 chr2 190325529 190326089 -62930494 - HERV16 LTR ERVL -1493 4161 3581 2479 312 44 18 chr2 190326192 190327247 -62929336 - HERV16 LTR ERVL -2007 2989 1966 623 200 77 32 chr2 190328462 190328617 -62927966 - LTR16C LTR ERVL -113 378 217 348 340 28 0 chr2 190328648 190328789 -62927794 - LTR16C LTR ERVL -346 145 1 2021 162 143 36 chr2 190329254 190329722 -62926861 - MLT2B1 LTR ERVL -2 518 1 212 213 0 33 chr2 190329879 190329940 -62926643 + (TATATG)n Simple_repeat Simple_repeat 2 60 0 2133 99 0 0 chr2 190331064 190331346 -62925237 + AluYb8 SINE Alu 37 318 0 3424 179 61 8 chr2 190332164 190332833 -62923750 + MER44D DNA MER2_type 1 705 0 641 178 0 8 chr2 190333298 190333427 -62923156 + L1ME2 LINE L1 6036 6163 -1 21 0 0 0 chr2 190333758 190333779 -62922804 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr2 190333968 190333997 -62922586 + AT_rich Low_complexity Low_complexity 1 29 0 24 32 0 0 chr2 190334523 190334554 -62922029 + AT_rich Low_complexity Low_complexity 1 31 0 244 329 24 111 chr2 190334879 190335086 -62921497 - L2 LINE L2 -101 3171 2983 298 337 63 60 chr2 190335093 190335597 -62920986 - L2 LINE L2 -515 2799 2294 186 43 0 0 chr2 190336064 190336087 -62920496 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr2 190336297 190336319 -62920264 + AT_rich Low_complexity Low_complexity 1 22 0 191 297 40 27 chr2 190337367 190337441 -62919142 + MIR3 SINE MIR 3 77 -131 236 246 22 116 chr2 190338091 190338229 -62918354 + MIR3 SINE MIR 79 203 -5 22 0 0 0 chr2 190338376 190338398 -62918185 + AT_rich Low_complexity Low_complexity 1 22 0 807 300 42 77 chr2 190338873 190339546 -62917037 - L2 LINE L2 -38 3275 2622 869 292 87 22 chr2 190339557 190339961 -62916622 + MLT1J1 LTR MaLR 13 442 -4 521 273 58 54 chr2 190340298 190340503 -62916080 - MIR SINE MIR -6 256 51 610 229 50 0 chr2 190341447 190341587 -62914996 + MIR SINE MIR 67 213 -49 303 28 0 0 chr2 190342966 190343002 -62913581 + (TG)n Simple_repeat Simple_repeat 2 37 0 318 223 92 87 chr2 190345598 190345782 -62910801 + HAL1 LINE L1 13 197 -2310 1141 284 146 19 chr2 190345809 190346549 -62910034 + HAL1 LINE L1 1529 2362 -145 27 73 0 0 chr2 190346666 190346721 -62909862 + AT_rich Low_complexity Low_complexity 1 55 0 4530 76 24 24 chr2 190349008 190350140 -62906443 - MER11A LTR ERVK 0 1266 1 312 120 0 0 chr2 190350283 190350333 -62906250 + (GGAA)n Simple_repeat Simple_repeat 3 52 0 753 260 94 69 chr2 190350459 190350894 -62905689 - LTR37B LTR ERV1 0 468 23 656 252 93 29 chr2 190350945 190351418 -62905165 + LTR33A LTR ERVL 2 520 -3 1963 153 9 15 chr2 190352168 190352502 -62904081 + MLT1A1 LTR MaLR 9 340 -25 1038 249 161 49 chr2 190353243 190353983 -62902600 - HAL1 LINE L1 -110 2397 1575 880 216 11 6 chr2 190353986 190354162 -62902421 - MER45A DNA AcHobo -1 177 1 704 282 72 6 chr2 190354165 190354498 -62902085 - HAL1 LINE L1 -1162 1345 991 1027 152 14 33 chr2 190355096 190355307 -62901276 - L1MA9 LINE L1 -39 6273 6067 23 33 0 0 chr2 190355654 190355684 -62900899 + AT_rich Low_complexity Low_complexity 1 30 0 44 20 0 0 chr2 190355796 190355847 -62900736 + AT_rich Low_complexity Low_complexity 1 51 0 447 259 16 31 chr2 190356542 190356746 -62899837 - L1MA10 LINE L1 -53 6272 5912 479 263 149 3 chr2 190356767 190356883 -62899700 - L1M4 LINE L1 -2474 3672 3574 2008 101 4 7 chr2 190356883 190357161 -62899422 - AluSp SINE Alu -1 312 36 479 263 149 3 chr2 190357161 190357333 -62899250 - L1M4 LINE L1 -2572 3574 3342 460 217 29 0 chr2 190357335 190357473 -62899110 - L1MEc LINE L1 -5454 942 801 363 287 0 0 chr2 190357927 190358042 -62898541 + (TA)n Simple_repeat Simple_repeat 1 115 0 291 54 0 0 chr2 190358944 190358981 -62897602 + (TG)n Simple_repeat Simple_repeat 1 37 0 591 287 83 66 chr2 190359392 190359803 -62896780 - MLT1J LTR MaLR -2 509 92 302 302 44 68 chr2 190359907 190360155 -62896428 - HAL1b LINE L1 -731 617 376 399 236 50 2 chr2 190360747 190360875 -62895708 - MLT1F LTR MaLR -2 540 441 3072 77 18 16 chr2 190361132 190361499 -62895084 - L1PB2 LINE L1 -1 6150 5780 282 56 0 0 chr2 190361499 190361535 -62895048 + (TA)n Simple_repeat Simple_repeat 1 36 0 3072 77 18 16 chr2 190361535 190361606 -62894977 - L1PB2 LINE L1 -371 5780 5711 339 65 0 0 chr2 190363400 190363446 -62893137 + (CA)n Simple_repeat Simple_repeat 1 46 0 1809 163 0 11 chr2 190363833 190364116 -62892467 + AluJb SINE Alu 1 280 -32 751 71 52 19 chr2 190364132 190364286 -62892297 + GA-rich Low_complexity Low_complexity 2 160 0 24 0 0 0 chr2 190364895 190364919 -62891664 + AT_rich Low_complexity Low_complexity 1 24 0 355 327 32 51 chr2 190364980 190365200 -62891383 - MIR3 SINE MIR -46 216 6 717 322 26 4 chr2 190365300 190365530 -62891053 - MIR SINE MIR -5 257 23 638 211 53 35 chr2 190365639 190365810 -62890773 - MER63B DNA MER1_type -260 176 3 425 322 64 18 chr2 190366714 190366885 -62889698 + MIR SINE MIR 15 193 -69 27 73 0 0 chr2 190366900 190366955 -62889628 + AT_rich Low_complexity Low_complexity 1 55 0 2424 80 0 3 chr2 190368201 190368513 -62888070 - AluY SINE Alu 0 311 1 2225 41 7 0 chr2 190369694 190369965 -62886618 - L1PA3 LINE L1 -319 5836 5564 3135 11 0 0 chr2 190369965 190370363 -62886220 + L1PA2 LINE L1 5799 6204 0 2214 105 0 49 chr2 190370427 190370752 -62885831 + AluSg SINE Alu 1 309 -1 790 306 93 40 chr2 190371098 190371572 -62885011 - MLT1K LTR MaLR -17 571 73 393 370 29 0 chr2 190372399 190372607 -62883976 - MIR SINE MIR 0 262 49 593 308 108 56 chr2 190372616 190373172 -62883411 + MLT1L LTR MaLR 24 608 -7 205 233 0 0 chr2 190374284 190374327 -62882256 - L2 LINE L2 0 3313 3271 891 189 44 0 chr2 190374775 190374955 -62881628 - MER5A DNA MER1_type 0 189 2 296 346 1 27 chr2 190375112 190375227 -62881356 - MIR SINE MIR -54 154 41 510 340 50 29 chr2 190376315 190376556 -62880027 + MIR SINE MIR 3 248 -14 738 263 166 105 chr2 190376854 190377500 -62879083 + MER115 DNA AcHobo 1 685 -8 1412 129 22 9 chr2 190378123 190378347 -62878236 - AluSg/x SINE Alu -7 305 79 882 293 144 36 chr2 190379473 190379687 -62876896 - L2 LINE L2 -7 3306 3116 2150 98 13 31 chr2 190379687 190380004 -62876579 + AluSx SINE Alu 1 311 -1 882 293 144 36 chr2 190380004 190380446 -62876137 - L2 LINE L2 -197 3116 2585 3666 158 79 19 chr2 190380453 190381210 -62875373 + L1MC2 LINE L1 5527 6329 -15 291 330 0 0 chr2 190382092 190382195 -62874388 + HAL1b LINE L1 96 198 -1150 2475 45 3 0 chr2 190382232 190382519 -62874064 + AluSp SINE Alu 1 288 -25 679 259 65 45 chr2 190382695 190383053 -62873530 + L2 LINE L2 2647 3021 -292 200 35 35 0 chr2 190383443 190383472 -62873111 + (CA)n Simple_repeat Simple_repeat 2 31 0 432 30 45 0 chr2 190383472 190383538 -62873045 + (GA)n Simple_repeat Simple_repeat 1 69 0 2109 185 3 8 chr2 190383538 190383905 -62872678 - MLT2D LTR ERVL -48 366 2 527 354 132 18 chr2 190387833 190388103 -62868480 + L2 LINE L2 2451 2689 -624 2288 84 7 3 chr2 190388103 190388411 -62868172 - AluY SINE Alu -2 309 1 527 354 132 18 chr2 190388411 190388882 -62867701 + L2 LINE L2 2689 3281 -32 2007 82 67 14 chr2 190388902 190389184 -62867399 - AluSx SINE Alu -12 300 4 279 218 194 0 chr2 190389760 190389872 -62866711 - MIR SINE MIR -63 145 26 2305 114 0 0 chr2 190390956 190391264 -62865319 + AluSg SINE Alu 1 308 -2 25 0 0 0 chr2 190391462 190391487 -62865096 + AT_rich Low_complexity Low_complexity 1 25 0 360 0 0 0 chr2 190392582 190392622 -62863961 + (TG)n Simple_repeat Simple_repeat 1 40 0 22 56 0 0 chr2 190392826 190392862 -62863721 + AT_rich Low_complexity Low_complexity 1 36 0 995 161 166 10 chr2 190392968 190393167 -62863416 + MER1B DNA MER1_type 110 339 0 23 33 0 0 chr2 190393252 190393282 -62863301 + AT_rich Low_complexity Low_complexity 1 30 0 2227 110 0 3 chr2 190394465 190394764 -62861819 - AluSg SINE Alu -12 298 1 236 282 35 12 chr2 190395846 190395931 -62860652 - MIR3 SINE MIR -6 202 116 21 0 0 0 chr2 190396220 190396241 -62860342 + AT_rich Low_complexity Low_complexity 1 21 0 360 329 138 9 chr2 190398629 190398839 -62857744 + MIR SINE MIR 21 257 -5 531 300 6 44 chr2 190399275 190399455 -62857128 + MIR SINE MIR 20 192 -70 856 226 45 0 chr2 190401399 190401598 -62854985 + MER3 DNA MER1_type 2 209 0 1777 185 42 26 chr2 190402944 190403328 -62853255 - MLT1B LTR MaLR 0 390 1 3608 163 30 10 chr2 190403563 190404236 -62852347 - L1MC2 LINE L1 -9 6335 5650 25 0 0 0 chr2 190404236 190404261 -62852322 + AT_rich Low_complexity Low_complexity 1 25 0 274 274 51 91 chr2 190404376 190404551 -62852032 - MIR3 SINE MIR -40 168 1 206 179 18 0 chr2 190405155 190405211 -62851372 + GA-rich Low_complexity Low_complexity 1 57 0 392 191 154 9 chr2 190406385 190406495 -62850088 - L1MA9 LINE L1 -38 6274 6149 25 31 0 0 chr2 190406988 190407020 -62849563 + AT_rich Low_complexity Low_complexity 1 32 0 1040 181 22 22 chr2 190407468 190407694 -62848889 + L1MC1 LINE L1 3787 4012 -2134 833 147 6 19 chr2 190407696 190407852 -62848731 + L1MA8 LINE L1 5961 6114 -177 43212 29 22 2 chr2 190407862 190413893 -62842690 - L1PA3 LINE L1 0 6155 2 700 174 31 11 chr2 190413892 190414074 -62842509 + L1MA8 LINE L1 6098 6291 -12 * 21 71 0 0 chr2 190414090 190414132 -62842451 + AT_rich Low_complexity Low_complexity 1 42 0 3474 232 28 14 chr2 190414147 190415074 -62841509 + L1MC1 LINE L1 4006 4945 -1201 806 200 77 72 chr2 190415105 190415451 -62841132 + MSTD LTR MaLR 1 396 0 3460 168 16 19 chr2 190415455 190416383 -62840200 + L1MC1 LINE L1 4965 5890 -443 861 197 89 19 chr2 190416383 190416596 -62839987 - MSTA LTR MaLR 0 428 201 1901 146 36 41 chr2 190416831 190417195 -62839388 + THE1B LTR MaLR 1 362 -2 8746 178 20 32 chr2 190417203 190417742 -62838841 - MSTA-int LTR MaLR 0 1651 1107 1802 132 65 57 chr2 190417742 190418114 -62838469 + THE1C LTR MaLR 1 375 0 8746 178 20 32 chr2 190418114 190419244 -62837339 - MSTA-int LTR MaLR -544 1107 1 1938 155 137 11 chr2 190419244 190419624 -62836959 - MSTA LTR MaLR 0 428 1 2590 122 28 9 chr2 190419624 190420050 -62836533 + L1MC1 LINE L1 5899 6332 -1 395 227 59 0 chr2 190420983 190421102 -62835481 + MER53 DNA DNA 1 126 -63 207 241 0 35 chr2 190421221 190421308 -62835275 + A-rich Low_complexity Low_complexity 4 87 0 341 291 104 50 chr2 190421400 190421470 -62835113 - L2 LINE L2 -466 2848 2783 2360 146 30 25 chr2 190421470 190421902 -62834681 - Tigger2a DNA MER2_type 0 434 1 341 291 104 50 chr2 190421902 190422072 -62834511 - L2 LINE L2 -531 2783 2595 22 0 0 0 chr2 190422125 190422147 -62834436 + AT_rich Low_complexity Low_complexity 1 22 0 2391 69 0 16 chr2 190422948 190423253 -62833330 - AluY SINE Alu -11 300 1 299 243 230 20 chr2 190423695 190423847 -62832736 + MIR SINE MIR 31 214 -48 244 261 272 0 chr2 190425187 190425279 -62831304 - MLT1J LTR MaLR -324 187 71 2128 238 63 51 chr2 190425415 190426139 -62830444 - MER21B LTR ERV1 -130 733 1 3370 266 97 40 chr2 190426745 190429721 -62826862 + L1ME3 LINE L1 2914 6059 -103 333 0 0 0 chr2 190431369 190431406 -62825177 + (TG)n Simple_repeat Simple_repeat 1 37 0 180 0 0 0 chr2 190432981 190433001 -62823582 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 2312 98 3 0 chr2 190433002 190433307 -62823276 + AluSg SINE Alu 1 306 -4 30 0 0 0 chr2 190433904 190433934 -62822649 + AT_rich Low_complexity Low_complexity 1 30 0 2237 110 7 3 chr2 190434131 190434441 -62822142 + AluSq SINE Alu 1 311 -2 263 102 82 0 chr2 190434632 190434681 -62821902 + MADE1 DNA Mariner 1 53 -27 296 49 0 0 chr2 190434723 190434764 -62821819 + MADE1 DNA Mariner 40 80 0 2114 123 0 13 chr2 190435311 190435612 -62820971 - AluSc SINE Alu -12 297 1 2295 94 7 3 chr2 190438245 190438553 -62818030 + AluY SINE Alu 1 309 -2 241 266 175 28 chr2 190441102 190441245 -62815338 + L2 LINE L2 2810 2973 -340 569 321 34 3 chr2 190441315 190441636 -62814947 + L1ME LINE L1 4501 4831 -1315 1021 266 33 102 chr2 190441692 190442683 -62813900 - L1M4c LINE L1 -4550 2409 1488 370 245 30 90 chr2 190442946 190443146 -62813437 - L1M4c LINE L1 -6306 549 87 235 244 89 0 chr2 190443198 190443288 -62813295 + MIR SINE MIR 165 262 0 263 155 56 0 chr2 190443373 190443444 -62813139 + L1MDa LINE L1 1882 1956 -4584 669 267 68 120 chr2 190443482 190444141 -62812442 - L2 LINE L2 -256 3057 2440 387 300 55 41 chr2 190444141 190444418 -62812165 + L1ME LINE L1 5523 5737 -429 6354 161 34 29 chr2 190444470 190446028 -62810555 + L1P3 LINE L1 635 2190 -4271 348 284 31 47 chr2 190446514 190446641 -62809942 + L2 LINE L2 3175 3299 -14 307 330 0 0 chr2 190446654 190446745 -62809838 + GA-rich Low_complexity Low_complexity 2 92 0 377 241 37 9 chr2 190446929 190447037 -62809546 - L1ME2 LINE L1 -208 5956 5846 1602 78 0 0 chr2 190448656 190448874 -62807709 + L1P LINE L1 4698 4915 -1231 17273 27 73 0 chr2 190448874 190451625 -62804958 + L1PA6 LINE L1 3340 6151 -3 21 0 0 0 chr2 190451625 190451646 -62804937 + AT_rich Low_complexity Low_complexity 1 21 0 44 20 0 0 chr2 190452774 190452825 -62803758 + AT_rich Low_complexity Low_complexity 1 51 0 183 239 0 104 chr2 190453084 190453151 -62803432 + MER5B DNA MER1_type 6 65 -113 291 291 30 67 chr2 190453526 190453660 -62802923 + L2 LINE L2 2918 3046 -226 183 361 49 14 chr2 190455604 190455748 -62800835 - MIR SINE MIR -30 232 84 182 342 0 53 chr2 190456118 190456194 -62800389 - MIR SINE MIR -76 132 61 450 159 0 0 chr2 190456374 190456481 -62800102 + (TG)n Simple_repeat Simple_repeat 2 108 0 31 26 0 0 chr2 190457287 190457325 -62799258 + AT_rich Low_complexity Low_complexity 1 38 0 180 152 0 0 chr2 190457361 190457394 -62799189 + (CA)n Simple_repeat Simple_repeat 2 34 0 3608 165 24 11 chr2 190458662 190459322 -62797261 - LTR51 LTR ERV1 0 671 3 2164 192 18 97 chr2 190459644 190460242 -62796341 - MLT2B3 LTR ERVL -3 551 1 10320 158 50 9 chr2 190460242 190462033 -62794550 - ERVL-B3 LTR ERVL -7 5757 3893 * 19152 179 37 6 chr2 190462012 190465429 -62791154 - ERVL-B3 LTR ERVL -2068 3696 176 1684 204 69 111 chr2 190465545 190466123 -62790460 - MLT2B3 LTR ERVL 0 554 1 860 262 23 19 chr2 190466172 190466386 -62790197 + MIR SINE MIR 3 217 -45 1686 148 8 8 chr2 190466405 190466668 -62789915 - AluJo SINE Alu -16 296 34 2313 113 0 0 chr2 190469059 190469369 -62787214 + AluSx SINE Alu 1 310 -2 34 0 0 0 chr2 190469369 190469403 -62787180 + AT_rich Low_complexity Low_complexity 1 34 0 349 248 15 5 chr2 190469962 190470110 -62786473 + MIR SINE MIR 50 262 0 1314 146 73 69 chr2 190470270 190470480 -62786103 - THE1B LTR MaLR -89 275 62 2176 94 0 3 chr2 190470480 190470766 -62785817 - AluSp SINE Alu -28 285 1 1314 146 73 69 chr2 190470766 190470829 -62785754 - THE1B LTR MaLR -302 62 1 1769 178 0 10 chr2 190470985 190471289 -62785294 + AluJb SINE Alu 1 301 -11 2148 140 28 6 chr2 190471584 190471940 -62784643 - THE1B LTR MaLR 0 364 1 551 182 0 0 chr2 190472438 190472537 -62784046 - L1PB4 LINE L1 -83 6073 5975 2489 81 0 0 chr2 190473652 190473959 -62782624 + AluSq SINE Alu 1 307 -6 199 242 67 92 chr2 190474422 190474542 -62782041 + MIR SINE MIR 80 196 -66 375 262 0 0 chr2 190474719 190474822 -62781761 - MER113 DNA MER1_type? -415 106 4 361 229 94 129 chr2 190474869 190474967 -62781616 + MIR SINE MIR 69 158 -104 1976 117 3 58 chr2 190474967 190475276 -62781307 + AluSq SINE Alu 1 292 -21 361 229 94 129 chr2 190475276 190475378 -62781205 + MIR SINE MIR 158 262 0 969 235 108 38 chr2 190476114 190476539 -62780044 + Charlie4a DNA MER1_type 37 491 -17 224 154 19 0 chr2 190477214 190477266 -62779317 + (TTCTG)n Simple_repeat Simple_repeat 2 54 0 204 132 0 26 chr2 190479178 190479216 -62777367 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 21 0 0 0 chr2 190479567 190479588 -62776995 + AT_rich Low_complexity Low_complexity 1 21 0 1961 135 3 3 chr2 190479588 190479896 -62776687 + AluSg SINE Alu 1 308 0 366 319 15 15 chr2 190480089 190480224 -62776359 + MER5A DNA MER1_type 55 189 0 2103 122 0 3 chr2 190480623 190480926 -62775657 - AluSx SINE Alu -10 302 1 320 297 123 31 chr2 190481416 190481611 -62774972 - Charlie8 DNA MER1_type -2176 241 29 268 152 0 229 chr2 190482300 190482405 -62774178 + MER102a DNA MER1_type 222 302 -28 213 94 0 0 chr2 190482450 190482482 -62774101 + (CA)n Simple_repeat Simple_repeat 2 33 0 2416 66 3 0 chr2 190482560 190482864 -62773719 + AluY SINE Alu 4 308 -3 27 0 0 0 chr2 190482864 190482891 -62773692 + AT_rich Low_complexity Low_complexity 1 27 0 1300 139 92 21 chr2 190483011 190483292 -62773291 - L1MA8 LINE L1 0 6291 5991 315 0 0 0 chr2 190484214 190484249 -62772334 + (TG)n Simple_repeat Simple_repeat 2 36 0 186 43 0 0 chr2 190485404 190485427 -62771156 + (A)n Simple_repeat Simple_repeat 1 23 0 203 317 10 20 chr2 190485466 190485567 -62771016 + CT-rich Low_complexity Low_complexity 2 101 0 239 275 202 0 chr2 190486365 190486474 -62770109 - MIR SINE MIR -51 211 81 510 279 131 11 chr2 190487374 190487557 -62769026 - MIR SINE MIR -56 206 2 213 189 0 0 chr2 190489464 190489501 -62767082 + (CA)n Simple_repeat Simple_repeat 2 38 0 225 108 0 0 chr2 190489959 190489996 -62766587 + (TG)n Simple_repeat Simple_repeat 1 37 0 2186 119 0 0 chr2 190490049 190490343 -62766240 + AluSg SINE Alu 4 297 -13 216 295 124 0 chr2 190490599 190490704 -62765879 + L2 LINE L2 3151 3268 -4 205 310 0 0 chr2 190490750 190490808 -62765775 + MIR SINE MIR 160 217 -45 237 114 0 0 chr2 190490890 190490925 -62765658 + HSMAR1 DNA Mariner 1 35 -1252 565 313 94 5 chr2 190490934 190491158 -62765425 - MIR SINE MIR -2 260 17 496 118 0 0 chr2 190491498 190491566 -62765017 - MER58C DNA MER1_type 0 215 148 266 194 15 0 chr2 190491590 190491657 -62764926 + CT-rich Low_complexity Low_complexity 3 70 0 349 227 62 62 chr2 190491657 190491785 -62764798 - MER58C DNA MER1_type -69 146 19 632 216 167 0 chr2 190491995 190492157 -62764426 - MER5A DNA MER1_type 0 189 1 228 304 0 0 chr2 190492503 190492559 -62764024 + L2 LINE L2 3217 3272 0 510 290 116 7 chr2 190493284 190493439 -62763144 + MIR SINE MIR 65 236 -26 210 257 14 0 chr2 190493678 190493752 -62762831 + (TA)n Simple_repeat Simple_repeat 1 75 0 384 59 0 0 chr2 190493960 190494011 -62762572 + (CA)n Simple_repeat Simple_repeat 2 52 0 593 92 0 23 chr2 190494535 190494641 -62761942 - AluSx SINE Alu 0 310 203 1435 113 5 0 chr2 190494731 190494926 -62761657 - AluSx SINE Alu -116 196 1 228 236 19 9 chr2 190495042 190495148 -62761435 + (TA)n Simple_repeat Simple_repeat 2 108 0 22 0 0 0 chr2 190496181 190496203 -62760380 + AT_rich Low_complexity Low_complexity 1 22 0 279 79 0 0 chr2 190497702 190497740 -62758843 + (CATA)n Simple_repeat Simple_repeat 3 40 0 347 232 0 38 chr2 190497932 190498055 -62758528 - MIR SINE MIR -18 190 79 375 293 34 39 chr2 190498090 190498295 -62758288 + L2 LINE L2 3109 3312 -1 183 272 117 39 chr2 190498541 190498644 -62757939 - MER5B DNA MER1_type -22 156 46 239 284 40 0 chr2 190499039 190499113 -62757470 + MIR3 SINE MIR 111 187 -21 15804 93 3 0 chr2 190500322 190503512 -62753071 + L1PA7 LINE L1 3013 6147 -7 2127 102 0 49 chr2 190504573 190504898 -62751685 + AluSc SINE Alu 1 309 0 290 275 55 0 chr2 190504910 190505001 -62751582 + L3 LINE CR1 1465 1560 -17 505 235 91 0 chr2 190505002 190505134 -62751449 - MIR SINE MIR 0 262 119 1369 35 0 0 chr2 190505885 190506059 -62750524 - L1P LINE L1 -2825 3321 3148 7539 30 1 1 chr2 190506059 190507470 -62749113 + L1PA4 LINE L1 4743 6155 0 349 239 17 0 chr2 190507491 190507608 -62748975 + GA-rich Low_complexity Low_complexity 1 119 0 189 0 0 0 chr2 190508661 190508682 -62747901 + (CA)n Simple_repeat Simple_repeat 1 21 0 281 317 84 82 chr2 190509590 190510176 -62746407 + L2 LINE L2 2675 3268 -4 191 294 176 37 chr2 190510804 190510940 -62745643 - MIR SINE MIR -20 242 88 26 0 0 0 chr2 190511501 190511527 -62745056 + AT_rich Low_complexity Low_complexity 1 26 0 968 337 133 26 chr2 190512504 190513323 -62743260 + L3 LINE CR1 641 1547 -30 410 283 42 0 chr2 190513699 190513819 -62742764 - MIR SINE MIR -63 145 21 27 103 0 0 chr2 190514599 190514696 -62741887 + AT_rich Low_complexity Low_complexity 1 97 0 32 67 0 0 chr2 190516041 190516101 -62740482 + AT_rich Low_complexity Low_complexity 1 60 0 900 187 62 22 chr2 190516114 190516339 -62740244 - L1MA6 LINE L1 0 6300 6067 2179 198 62 27 chr2 190516586 190517587 -62738996 + L1MC/D LINE L1 4707 5736 -608 2177 270 268 20 chr2 190517589 190518152 -62738431 - L2 LINE L2 -791 2523 2101 576 202 0 0 chr2 190518152 190518276 -62738307 - L1MA10 LINE L1 -14 6320 6197 2177 270 268 20 chr2 190518276 190518820 -62737763 - L2 LINE L2 -1213 2101 1141 1581 203 89 47 chr2 190519258 190519405 -62737178 + MLT1C LTR MaLR 1 140 -327 3643 154 19 73 chr2 190519405 190520235 -62736348 - LTR1 LTR ERV1 0 785 1 1581 203 89 47 chr2 190520235 190520535 -62736048 + MLT1C LTR MaLR 140 467 0 263 325 53 24 chr2 190520630 190520799 -62735784 + L2 LINE L2 508 681 -2633 924 329 113 15 chr2 190520802 190521404 -62735179 + L2 LINE L2 1001 1661 -1653 3738 135 35 97 chr2 190521411 190522247 -62734336 + L1 LINE L1 3448 4231 -1915 1734 151 42 7 chr2 190523269 190523554 -62733029 + AluJo SINE Alu 1 295 -17 2278 102 0 0 chr2 190525848 190526143 -62730440 - AluSc SINE Alu -14 295 1 263 370 31 21 chr2 190527127 190527272 -62729311 - MIR SINE MIR -55 153 20 373 273 70 63 chr2 190529669 190529920 -62726663 - L2 LINE L2 -313 3000 2749 293 156 44 89 chr2 190529926 190530016 -62726567 + MER39B LTR ERV1 6 91 -562 * 1410 195 108 49 chr2 190529990 190530362 -62726221 + MER39 LTR ERV1 257 659 -48 1825 151 57 13 chr2 190530362 190530661 -62725922 - AluSx SINE Alu 0 312 1 1410 195 108 49 chr2 190530661 190530714 -62725869 + MER39 LTR ERV1 659 707 0 2096 109 0 39 chr2 190531050 190531362 -62725221 - AluSg SINE Alu -10 300 1 715 195 8 0 chr2 190531422 190531550 -62725033 - MER47B DNA MER2_type -1 417 289 899 68 30 15 chr2 190531551 190531684 -62724899 - MER85 DNA T2_type 0 139 5 * 1365 199 0 0 chr2 190531682 190531928 -62724655 - MER47B DNA MER2_type -140 278 33 1997 119 40 77 chr2 190531985 190532363 -62724220 + THE1B LTR MaLR 1 364 0 11457 101 2 4 chr2 190532364 190533945 -62722638 + THE1B-int LTR MaLR 2 1580 0 1889 131 122 15 chr2 190533945 190534274 -62722309 + THE1B LTR MaLR 1 364 0 224 230 203 0 chr2 190534385 190534459 -62722124 - L2 LINE L2 -5 3308 3220 274 287 74 98 chr2 190534748 190535205 -62721378 + L2 LINE L2 1640 2085 -1229 198 291 13 51 chr2 190535304 190535383 -62721200 + L2 LINE L2 2323 2398 -916 210 176 0 0 chr2 190536002 190536053 -62720530 + CT-rich Low_complexity Low_complexity 2 52 0 387 0 0 0 chr2 190536054 190536097 -62720486 + (CA)n Simple_repeat Simple_repeat 2 44 0 29 70 0 0 chr2 190536407 190536464 -62720119 + AT_rich Low_complexity Low_complexity 1 57 0 1126 280 137 57 chr2 190538636 190539436 -62717147 - L2 LINE L2 -18 3254 2396 220 337 0 23 chr2 190539495 190539581 -62717002 - L2 LINE L2 -942 2372 2289 323 364 55 12 chr2 190540037 190540202 -62716381 - L1M LINE L1 -2379 5429 5258 5364 172 17 21 chr2 190541099 190543131 -62713452 + L1PB3 LINE L1 4125 6152 -2 266 241 14 132 chr2 190545391 190545581 -62711002 - MIR SINE MIR -2 260 99 193 311 82 82 chr2 190545981 190546238 -62710345 - L2 LINE L2 -832 2482 2226 299 200 77 0 chr2 190546257 190546322 -62710261 - MIR SINE MIR -37 225 156 1203 252 70 29 chr2 190546323 190546767 -62709816 + MLT1C LTR MaLR 6 467 0 434 267 60 33 chr2 190546775 190546925 -62709658 - MIR SINE MIR -106 156 3 375 310 47 22 chr2 190547579 190547762 -62708821 - MIR SINE MIR -52 210 16 1669 119 19 15 chr2 190548224 190548485 -62708098 - AluSx SINE Alu -49 263 2 22 0 0 0 chr2 190549357 190549379 -62707204 + AT_rich Low_complexity Low_complexity 1 22 0 1091 71 173 0 chr2 190550008 190550176 -62706407 + AluY SINE Alu 115 311 0 2551 65 0 0 chr2 190552014 190552321 -62704262 + AluY SINE Alu 1 307 -4 212 369 62 68 chr2 190552541 190552910 -62703673 + L2 LINE L2 2901 3267 -5 3740 168 87 96 chr2 190554368 190554720 -62701863 + L1MC3 LINE L1 6758 7112 -673 251 321 0 12 chr2 190554720 190554804 -62701779 + MLT1F1 LTR MaLR 43 125 -442 3740 168 87 96 chr2 190554804 190555249 -62701334 + L1MC3 LINE L1 7112 7630 -155 2812 123 7 9 chr2 190555249 190555678 -62700905 + MSTA LTR MaLR 1 428 0 3740 168 87 96 chr2 190555678 190555832 -62700751 + L1MC3 LINE L1 7630 7784 -1 29 28 0 0 chr2 190556599 190556635 -62699948 + AT_rich Low_complexity Low_complexity 1 36 0 274 302 103 35 chr2 190558058 190558174 -62698409 - MIR SINE MIR -23 239 116 235 369 0 12 chr2 190558700 190558784 -62697799 - MIR SINE MIR -160 102 20 429 36 0 0 chr2 190559358 190559413 -62697170 + (CA)n Simple_repeat Simple_repeat 2 56 0 999 321 117 52 chr2 190559731 190560595 -62695988 + L3 LINE CR1 423 1342 -235 1056 159 0 23 chr2 190560600 190560776 -62695807 - FAM SINE Alu 0 175 4 278 333 42 0 chr2 190562370 190562466 -62694117 - MIR3 SINE MIR -54 154 55 236 233 216 30 chr2 190565717 190565949 -62690634 + L1ME4a LINE L1 5843 6117 -4 183 259 0 0 chr2 190565955 190566013 -62690570 + (TA)n Simple_repeat Simple_repeat 1 58 0 248 0 31 0 chr2 190566609 190566641 -62689942 + (TTG)n Simple_repeat Simple_repeat 1 33 0 218 259 17 161 chr2 190567629 190567803 -62688780 + MIR SINE MIR 54 202 -60 2691 175 76 29 chr2 190567804 190568440 -62688143 + L1MC3 LINE L1 6133 6333 0 230 366 107 0 chr2 190568878 190568990 -62687593 + L2 LINE L2 2932 3055 -217 2485 183 83 70 chr2 190570624 190571394 -62685189 + L1MDa LINE L1 1799 2558 -3982 2093 132 7 0 chr2 190571394 190571683 -62684900 + AluSx SINE Alu 1 291 -21 261 57 0 0 chr2 190571684 190571719 -62684864 + (CA)n Simple_repeat Simple_repeat 2 36 0 2485 183 83 70 chr2 190571719 190571757 -62684826 + L1MDa LINE L1 2557 2619 -3921 1363 215 175 21 chr2 190571759 190572182 -62684401 + L1MD2 LINE L1 5859 6346 -13 1254 100 5 4 chr2 190572343 190572593 -62683990 + AluSq SINE Alu 1 315 0 1124 80 7 20 chr2 190574336 190574487 -62682096 - AluSg/x SINE Alu -16 294 146 2059 132 10 10 chr2 190576982 190577286 -62679297 - AluSx SINE Alu -8 304 1 606 132 0 0 chr2 190577424 190577515 -62679068 - 5S rRNA rRNA -30 91 1 2252 87 0 39 chr2 190579574 190579885 -62676698 - AluSc SINE Alu -5 304 6 1113 180 23 108 chr2 190579979 190580177 -62676406 + L1MA9 LINE L1 5958 6116 -196 503 31 15 0 chr2 190580177 190580242 -62676341 + (GGAA)n Simple_repeat Simple_repeat 3 68 0 1113 180 23 108 chr2 190580242 190580387 -62676196 + L1MA9 LINE L1 6116 6272 -40 219 287 259 21 chr2 190581556 190581699 -62674884 - L2 LINE L2 -9 3304 3128 854 312 177 12 chr2 190581821 190582567 -62674016 - L2 LINE L2 -266 3006 2141 299 247 158 32 chr2 190583452 190583610 -62672973 - L3 LINE CR1 -336 1241 1064 228 373 73 27 chr2 190583747 190583967 -62672616 + LTR16C LTR ERVL 160 389 -102 2187 123 3 3 chr2 190584705 190585013 -62671570 - AluSq SINE Alu -5 308 1 5697 159 8 5 chr2 190585112 190586656 -62669927 + L1PB3 LINE L1 4577 6127 -27 1679 187 14 10 chr2 190586656 190586967 -62669616 + AluJb SINE Alu 2 313 0 387 355 64 36 chr2 190587245 190587496 -62669087 - L3 LINE CR1 -1 1576 1319 457 308 144 39 chr2 190587514 190587999 -62668584 - L3 LINE CR1 -472 1105 525 1830 164 0 3 chr2 190588001 190588287 -62668296 + AluJb SINE Alu 1 285 -27 29 28 0 0 chr2 190588287 190588323 -62668260 + AT_rich Low_complexity Low_complexity 1 36 0 260 328 73 49 chr2 190588323 190588527 -62668056 - L3 LINE CR1 -1049 528 320 2116 81 0 0 chr2 190588740 190589001 -62667582 - AluSc SINE Alu -16 293 33 286 53 0 0 chr2 190589567 190589605 -62666978 + MADE1 DNA Mariner 1 38 -42 353 262 208 33 chr2 190589918 190590101 -62666482 - MIR SINE MIR 0 262 48 189 0 0 0 chr2 190590326 190590347 -62666236 + (TG)n Simple_repeat Simple_repeat 2 22 0 2320 131 86 8 chr2 190590477 190590874 -62665709 - MSTA LTR MaLR 0 428 1 361 265 41 0 chr2 190591253 190591351 -62665232 - L2 LINE L2 -3 3269 3168 446 326 142 35 chr2 190591804 190592233 -62664350 + L2 LINE L2 2838 3312 -1 180 325 167 8 chr2 190592300 190592420 -62664163 - L2 LINE L2 -193 3079 2941 243 349 118 42 chr2 190592488 190592818 -62663765 - L2 LINE L2 -465 2849 2495 696 319 142 35 chr2 190592838 190593471 -62663112 - L2 LINE L2 -927 2387 1687 518 280 154 28 chr2 190593503 190593717 -62662866 - MIR SINE MIR -7 255 15 834 271 106 20 chr2 190593773 190594065 -62662518 - L2 LINE L2 -12 3301 2985 279 265 122 14 chr2 190594949 190595096 -62661487 - HAL1b LINE L1 -7 1341 1179 27121 43 38 2 chr2 190595098 190598528 -62658055 + L1P LINE L1 1 3554 -2592 260 324 102 0 chr2 190599479 190599587 -62656996 + MER117 DNA MER1_type 44 162 -35 264 158 0 0 chr2 190600597 190600654 -62655929 + GA-rich Low_complexity Low_complexity 1 57 0 24 32 0 0 chr2 190600745 190600776 -62655807 + AT_rich Low_complexity Low_complexity 1 31 0 944 189 131 32 chr2 190601548 190601861 -62654722 - MER2 DNA MER2_type 0 344 1 351 236 0 34 chr2 190602444 190602533 -62654050 - L3 LINE CR1 -102 1475 1390 262 253 40 27 chr2 190602968 190603043 -62653540 + MIR SINE MIR 15 90 -172 307 278 48 64 chr2 190603574 190603883 -62652700 + L1MB7 LINE L1 111 627 -6228 8962 224 77 33 chr2 190603912 190605441 -62651142 + L1MB7 LINE L1 2901 4362 -2615 6246 97 7 2 chr2 190605441 190606618 -62649965 + L1PA14 LINE L1 4971 6152 -9 8962 224 77 33 chr2 190606618 190608671 -62647912 + L1MB7 LINE L1 4362 6631 -346 406 245 111 8 chr2 190608745 190608908 -62647675 + L1MB7 LINE L1 6779 6985 -5 5165 284 89 26 chr2 190609935 190611461 -62645122 - L2 LINE L2 0 3313 1884 2151 87 7 14 chr2 190611461 190611770 -62644813 - AluY SINE Alu 0 307 1 5165 284 89 26 chr2 190611770 190612132 -62644451 - L2 LINE L2 -1429 1884 1546 349 141 0 130 chr2 190612132 190612224 -62644359 + MADE1 DNA Mariner 1 80 0 5165 284 89 26 chr2 190612224 190612656 -62643927 - L2 LINE L2 -1767 1546 842 237 200 0 0 chr2 190612749 190612789 -62643794 + 5S rRNA rRNA 2 41 -80 262 235 0 15 chr2 190614320 190614381 -62642202 - AluJo SINE Alu -160 142 81 1903 56 4 8 chr2 190614381 190614631 -62641952 - L1PA5 LINE L1 -3 6151 5903 2409 63 0 0 chr2 190614637 190614939 -62641644 + L1PA6 LINE L1 5607 5908 -246 646 116 42 0 chr2 190614940 190615035 -62641548 - AluJo SINE Alu -211 101 3 182 386 55 31 chr2 190616942 190617105 -62639478 + MIR SINE MIR 53 219 -43 192 298 0 0 chr2 190617529 190617576 -62639007 + MIR SINE MIR 32 78 -130 298 188 57 55 chr2 190617937 190618062 -62638521 + LTR33A LTR ERVL 440 523 0 30 0 0 0 chr2 190618155 190618185 -62638398 + AT_rich Low_complexity Low_complexity 1 30 0 2082 281 127 68 chr2 190618207 190618858 -62637725 + HAL1 LINE L1 10 621 -1886 2435 61 0 13 chr2 190618858 190619169 -62637414 + AluY SINE Alu 1 307 -4 2082 281 127 68 chr2 190619169 190619760 -62636823 + HAL1 LINE L1 621 1176 -1331 2428 70 3 0 chr2 190619760 190620060 -62636523 + AluY SINE Alu 1 301 -10 2082 281 127 68 chr2 190620060 190620089 -62636494 + HAL1 LINE L1 1176 1202 -1305 1956 140 0 46 chr2 190620089 190620261 -62636322 - AluSx SINE Alu -17 295 142 1820 67 0 0 chr2 190620261 190620484 -62636099 - AluY SINE Alu 0 311 89 1956 140 0 46 chr2 190620484 190620618 -62635965 - AluSx SINE Alu -170 142 3 2082 281 127 68 chr2 190620618 190621589 -62634994 + HAL1 LINE L1 1202 2386 -121 866 265 152 55 chr2 190622762 190623346 -62633237 + L2 LINE L2 892 1532 -1782 1033 342 73 42 chr2 190623385 190623410 -62633173 + L2 LINE L2 2054 2077 -1236 333 117 0 0 chr2 190623410 190623470 -62633113 + (TG)n Simple_repeat Simple_repeat 2 61 0 1033 342 73 42 chr2 190623470 190623768 -62632815 + L2 LINE L2 2077 2364 -949 894 204 121 48 chr2 190623768 190624081 -62632502 + MER46C DNA MER2_type 1 336 -2 1033 342 73 42 chr2 190624081 190624137 -62632446 + L2 LINE L2 2364 2417 -896 402 21 0 0 chr2 190624137 190624184 -62632399 + (CA)n Simple_repeat Simple_repeat 2 48 0 1033 342 73 42 chr2 190624184 190625022 -62631561 + L2 LINE L2 2417 3313 0 331 301 62 41 chr2 190626673 190626819 -62629764 - MLT1H LTR MaLR -206 343 195 291 228 39 39 chr2 190628368 190628472 -62628111 - MLT1H LTR MaLR -2 590 463 341 301 62 41 chr2 190628493 190628639 -62627944 - MLT1H LTR MaLR -206 343 195 1395 224 2 5 chr2 190629219 190629561 -62627022 + L1 LINE L1 3877 4217 -1929 236 53 26 0 chr2 190629821 190629859 -62626724 + (TTTTTA)n Simple_repeat Simple_repeat 2 40 0 261 0 0 0 chr2 190629876 190629905 -62626678 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2124 46 0 0 chr2 190629908 190630169 -62626414 - L1PA2 LINE L1 -2 6153 5893 21 0 0 0 chr2 190630361 190630382 -62626201 + AT_rich Low_complexity Low_complexity 1 21 0 271 309 21 11 chr2 190630638 190630732 -62625851 + MIR SINE MIR 56 150 -112 35 0 0 0 chr2 190631241 190631276 -62625307 + AT_rich Low_complexity Low_complexity 1 35 0 392 297 42 0 chr2 190632158 190632276 -62624307 - MIR SINE MIR -36 226 104 5240 244 27 18 chr2 190632292 190635111 -62621472 + L1PA13 LINE L1 1 3208 -3589 4121 201 15 0 chr2 190635108 190635975 -62620608 + L1P LINE L1 4322 5201 -945 * 253 326 22 33 chr2 190636363 190636455 -62620128 + L2 LINE L2 3182 3272 0 245 280 13 13 chr2 190636477 190636552 -62620031 - MIR SINE MIR -121 141 67 534 43 0 0 chr2 190637031 190637100 -62619483 + (TG)n Simple_repeat Simple_repeat 2 70 0 970 208 109 21 chr2 190637152 190637441 -62619142 - MLT1D LTR MaLR 0 505 206 1624 184 47 7 chr2 190637465 190637764 -62618819 + AluJb SINE Alu 1 311 -1 859 140 11 17 chr2 190637768 190637947 -62618636 + GA-rich Low_complexity Low_complexity 1 178 0 623 218 11 80 chr2 190637968 190638156 -62618427 - MLT1D LTR MaLR -330 175 1 190 347 0 42 chr2 190638257 190638329 -62618254 + MIR SINE MIR 34 102 -160 324 375 73 33 chr2 190638552 190638797 -62617786 - L2 LINE L2 0 3272 3018 354 294 26 20 chr2 190638842 190638995 -62617588 - MER20B DNA MER1_type -604 179 26 183 324 29 0 chr2 190639177 190639245 -62617338 - L2 LINE L2 -544 2770 2701 23 33 0 0 chr2 190640018 190640048 -62616535 + AT_rich Low_complexity Low_complexity 1 30 0 221 171 0 24 chr2 190644387 190644428 -62612155 + GA-rich Low_complexity Low_complexity 1 40 0 480 285 53 13 chr2 190644726 190644877 -62611706 - MIR SINE MIR 0 262 106 815 262 57 9 chr2 190646084 190646313 -62610270 + MIR SINE MIR 23 262 0 1326 99 66 9 chr2 190646530 190646848 -62609735 + MSTA LTR MaLR 1 428 0 306 344 21 0 chr2 190647073 190647169 -62609414 + HAL1 LINE L1 1820 1917 -590 357 331 0 27 chr2 190647276 190647424 -62609159 + L1MEd LINE L1 11 154 -5965 546 355 60 35 chr2 190647434 190647972 -62608611 + L1MEd LINE L1 213 763 -5356 594 269 76 95 chr2 190648048 190648279 -62608304 + L1MEd LINE L1 786 1020 -5099 1613 168 16 59 chr2 190648279 190648421 -62608162 + AluJb SINE Alu 1 148 -164 528 93 0 0 chr2 190648421 190648496 -62608087 + (TA)n Simple_repeat Simple_repeat 1 75 0 1613 168 16 59 chr2 190648496 190648675 -62607908 + AluJb SINE Alu 148 308 -4 594 269 76 95 chr2 190648675 190648778 -62607805 + L1MEd LINE L1 1020 1123 -4996 2126 136 48 14 chr2 190648778 190649130 -62607453 + THE1B LTR MaLR 1 364 0 11556 103 2 2 chr2 190649130 190650709 -62605874 + THE1B-int LTR MaLR 1 1580 0 1988 137 73 12 chr2 190650709 190651052 -62605531 + THE1B LTR MaLR 1 364 0 594 269 76 95 chr2 190651052 190651189 -62605394 + L1MEd LINE L1 1120 1251 -4868 459 289 150 5 chr2 190651208 190651395 -62605188 + L1MEc LINE L1 246 459 -6148 4045 207 73 16 chr2 190651400 190652681 -62603902 + L1MEc LINE L1 1252 2773 -3653 240 290 11 0 chr2 190652772 190652800 -62603783 + L1MB7 LINE L1 5782 5808 -376 2588 82 3 0 chr2 190652800 190653142 -62603441 - L1PA6 LINE L1 -7 6147 5805 240 290 11 0 chr2 190653142 190653206 -62603377 + L1MB7 LINE L1 5808 5875 -309 1305 155 48 0 chr2 190653213 190653465 -62603118 + L1MA5A LINE L1 6024 6287 -10 25 31 0 0 chr2 190653473 190653505 -62603078 + AT_rich Low_complexity Low_complexity 1 32 0 1130 195 26 65 chr2 190653505 190653767 -62602816 + L1MB7 LINE L1 5880 6130 -54 2110 57 54 14 chr2 190653767 190654063 -62602520 + AluY SINE Alu 2 309 -2 1130 195 26 65 chr2 190654063 190654108 -62602475 + L1MB7 LINE L1 6130 6175 -9 1797 164 13 0 chr2 190654122 190654420 -62602163 + AluSx SINE Alu 1 302 -10 250 259 23 69 chr2 190654533 190654664 -62601919 + HAL1b LINE L1 792 916 -432 322 151 86 21 chr2 190655072 190655165 -62601418 - L1ME4a LINE L1 -1 6120 6022 471 299 146 37 chr2 190655217 190655621 -62600962 - L1ME4a LINE L1 -227 5894 5447 395 317 107 66 chr2 190655705 190656283 -62600300 - L1ME4a LINE L1 -813 5333 4732 341 269 146 15 chr2 190656346 190656476 -62600107 - MIR SINE MIR -106 156 10 319 268 102 13 chr2 190656493 190656650 -62599933 - L1ME4a LINE L1 -1708 4438 4268 462 256 12 69 chr2 190657517 190657677 -62598906 - L2 LINE L2 0 3313 3163 1135 260 73 66 chr2 190657703 190658267 -62598316 + MLT1H1 LTR MaLR 1 553 -2 666 312 77 7 chr2 190658268 190658360 -62598223 - L2 LINE L2 -199 3114 3030 2958 70 0 0 chr2 190658360 190658745 -62597838 + L1PA7 LINE L1 5766 6150 -4 666 312 77 7 chr2 190658745 190659022 -62597561 - L2 LINE L2 -283 3030 2722 463 342 148 30 chr2 190659085 190659483 -62597100 + L2 LINE L2 2828 3272 0 272 313 27 36 chr2 190660140 190660252 -62596331 + L2 LINE L2 2826 2936 -378 2165 106 10 0 chr2 190661171 190661473 -62595110 + AluSq SINE Alu 1 305 -8 288 0 0 0 chr2 190661473 190661505 -62595078 + (CAG)n Simple_repeat Simple_repeat 2 33 0 22 70 0 0 chr2 190661848 190661891 -62594692 + AT_rich Low_complexity Low_complexity 1 43 0 302 302 117 1 chr2 190662328 190662443 -62594140 + MIR SINE MIR 16 140 -68 390 363 62 0 chr2 190662469 190662662 -62593921 + MIR SINE MIR 46 250 -12 32 0 0 0 chr2 190666060 190666092 -62590491 + AT_rich Low_complexity Low_complexity 1 32 0 957 276 70 19 chr2 190666236 190666609 -62589974 + LTR33A LTR ERVL 132 523 0 921 290 106 19 chr2 190671715 190672129 -62584454 - MLT1J2 LTR MaLR 0 450 1 1067 295 118 12 chr2 190672311 190672718 -62583865 - L2 LINE L2 -2515 799 350 469 289 33 13 chr2 190672760 190672912 -62583671 - L2 LINE L2 -3153 161 7 617 92 0 0 chr2 190673528 190673615 -62582968 - AluSx SINE Alu -7 303 217 6131 52 11 14 chr2 190673615 190674397 -62582186 + LTR17 LTR ERV1 1 780 0 1669 114 5 0 chr2 190674397 190674617 -62581966 - AluSx SINE Alu -90 222 2 326 380 29 29 chr2 190674737 190674908 -62581675 - L2 LINE L2 -176 3096 2926 228 379 31 19 chr2 190675065 190675226 -62581357 - L2 LINE L2 -559 2755 2593 316 333 40 0 chr2 190675457 190675583 -62581000 - L3 LINE CR1 -1 1576 1446 502 295 95 16 chr2 190675602 190675792 -62580791 + MIR SINE MIR 14 218 -44 2288 97 3 3 chr2 190676772 190677083 -62579500 + AluSx SINE Alu 1 311 -1 839 264 94 25 chr2 190677442 190677847 -62578736 + Charlie7 DNA MER1_type 291 723 -1889 285 135 43 172 chr2 190677837 190678000 -62578583 + Charlie7 DNA MER1_type 2415 2556 -56 * 621 104 8 2 chr2 190678101 190678352 -62578231 + AluSx SINE Alu 1 299 -10 1796 175 0 0 chr2 190678523 190678842 -62577741 + AluJb SINE Alu 6 324 0 23 54 0 0 chr2 190679360 190679397 -62577186 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr2 190679525 190679553 -62577030 + AT_rich Low_complexity Low_complexity 1 28 0 388 333 87 19 chr2 190680310 190680517 -62576066 - L2 LINE L2 -407 2907 2687 1833 250 42 28 chr2 190680517 190681089 -62575494 + L1ME3A LINE L1 5444 6023 -147 37092 32 4 1 chr2 190681152 190686628 -62569955 - L1PA3 LINE L1 -2 6153 670 270 336 91 19 chr2 190686822 190687030 -62569553 - L3 LINE CR1 -251 1326 1104 31 0 0 0 chr2 190687584 190687615 -62568968 + AT_rich Low_complexity Low_complexity 1 31 0 2192 114 0 25 chr2 190688868 190689183 -62567400 - AluSg SINE Alu 0 310 4 2053 84 46 0 chr2 190689486 190689770 -62566813 + AluYa5 SINE Alu 3 299 -12 23 0 0 0 chr2 190690021 190690044 -62566539 + AT_rich Low_complexity Low_complexity 1 23 0 1504 193 4 4 chr2 190690083 190690342 -62566241 + AluJb SINE Alu 26 284 -28 213 39 0 0 chr2 190690342 190690368 -62566215 + (TA)n Simple_repeat Simple_repeat 2 27 0 622 280 68 65 chr2 190690524 190690860 -62565723 - MLT1J LTR MaLR -172 339 3 634 276 29 6 chr2 190691955 190692129 -62564454 + MIR SINE MIR 71 248 -14 192 40 0 0 chr2 190692756 190692781 -62563802 + (TAA)n Simple_repeat Simple_repeat 1 25 0 285 344 16 24 chr2 190693123 190693248 -62563335 + L2 LINE L2 3149 3272 0 2342 52 45 0 chr2 190693689 190693978 -62562605 + AluY SINE Alu 1 302 -9 38 39 0 0 chr2 190744847 190744899 -62511684 + AT_rich Low_complexity Low_complexity 1 52 0 7871 153 20 30 chr2 190745542 190747818 -62508765 + HUERS-P1 LTR ERV1 3659 6263 0 2981 113 21 53 chr2 190747818 190748304 -62508279 + LTR8 LTR ERV1 1 470 -221 2678 93 5 9 chr2 190748412 190748802 -62507781 - MER57-int LTR ERV1 -2560 3386 3026 2919 139 118 27 chr2 190748804 190749357 -62507226 - MER57-int LTR ERV1 -4359 3178 2576 327 49 0 0 chr2 190749362 190749403 -62507180 + (TTTC)n Simple_repeat Simple_repeat 4 44 0 3141 127 56 6 chr2 190749403 190749923 -62506660 - MER57-int LTR ERV1 -4332 1931 1386 2225 124 13 43 chr2 190749923 190750295 -62506288 - THE1C LTR MaLR 0 375 15 2645 131 5 8 chr2 190750311 190750709 -62505874 - THE1C-int LTR MaLR 0 1580 1184 2158 163 106 77 chr2 190750810 190751406 -62505177 + MER4C-int LTR ERV1 5984 6596 -2 2935 92 67 2 chr2 190751416 190751852 -62504731 + MER4C LTR ERV1 1 464 -1 347 298 8 8 chr2 190751935 190752059 -62504524 - MLT1I LTR MaLR -228 181 58 363 23 0 0 chr2 190752795 190752839 -62503744 + (TG)n Simple_repeat Simple_repeat 2 45 0 1110 148 17 21 chr2 190753368 190753605 -62502978 - L1MA5 LINE L1 0 6300 6065 6863 151 45 51 chr2 190753984 190755524 -62501059 + MER4-int LTR ERV1 3750 5280 -1318 4773 53 7 2 chr2 190755527 190756111 -62500472 - LTR14C LTR ERVK 0 587 1 9244 67 5 5 chr2 190756111 190757308 -62499275 - HERVK14C LTR ERVK 0 7417 6221 318 119 0 0 chr2 190757408 190757450 -62499133 - Tigger2 DNA MER2_type -2676 42 1 416 294 101 52 chr2 190757452 190757738 -62498845 - MLT1I LTR MaLR -38 371 72 2488 71 0 0 chr2 190757911 190758220 -62498363 - AluY SINE Alu -2 309 1 4252 154 42 56 chr2 190759128 190761175 -62495408 + MER4-int LTR ERV1 1394 3648 -2950 764 212 34 0 chr2 190761276 190761422 -62495161 + Tigger2 DNA MER2_type 2568 2718 0 405 0 0 0 chr2 190761669 190761714 -62494869 + (TG)n Simple_repeat Simple_repeat 2 46 0 1313 182 33 8 chr2 190761714 190761956 -62494627 + MER2 DNA MER2_type 2 249 -96 249 285 150 87 chr2 190761974 190762413 -62494170 + L1MEd LINE L1 18 484 -5635 493 203 25 8 chr2 190762436 190762554 -62494029 - L1MA9 LINE L1 -34 6278 6159 305 230 38 43 chr2 190763074 190763198 -62493385 + L1MEd LINE L1 1183 1344 -4862 216 67 0 0 chr2 190763238 190763268 -62493315 + (CA)n Simple_repeat Simple_repeat 2 31 0 308 295 131 25 chr2 190763269 190763513 -62493070 + L1MEd LINE L1 1390 1659 -4651 482 336 126 87 chr2 190764673 190765538 -62491045 - L2 LINE L2 -660 2654 1824 1460 161 19 96 chr2 190765538 190765860 -62490723 - AluSx SINE Alu -10 302 6 482 336 126 87 chr2 190765860 190765970 -62490613 - L2 LINE L2 -1490 1824 1720 2455 61 3 0 chr2 190765970 190766265 -62490318 - AluY SINE Alu -15 296 1 482 336 126 87 chr2 190766265 190767151 -62489432 - L2 LINE L2 -1594 1720 720 2293 183 22 20 chr2 190767189 190767619 -62488964 - LOR1b LTR ERV1 0 461 28 2326 107 0 0 chr2 190767619 190767928 -62488655 + AluSg SINE Alu 1 309 -1 2293 183 22 20 chr2 190767928 190767957 -62488626 - LOR1b LTR ERV1 -433 28 1 25 65 0 0 chr2 190768810 190768856 -62487727 + AT_rich Low_complexity Low_complexity 1 46 0 28 0 0 0 chr2 190768907 190768935 -62487648 + AT_rich Low_complexity Low_complexity 1 28 0 1220 303 50 82 chr2 190769078 190769634 -62486949 + L1MEc LINE L1 1707 2163 -4263 1546 197 37 0 chr2 190769634 190769928 -62486655 + AluJb SINE Alu 2 306 -6 1220 303 50 82 chr2 190769928 190770097 -62486486 + L1MEc LINE L1 2163 2336 -4090 1637 160 3 29 chr2 190770101 190770414 -62486169 + L1MA3 LINE L1 5974 6278 -27 2371 272 85 33 chr2 190770414 190770655 -62485928 + L1MEc LINE L1 2382 2609 -3817 1876 190 43 3 chr2 190770655 190771029 -62485554 - MLT1B LTR MaLR 0 390 2 2371 272 85 33 chr2 190771029 190771465 -62485118 + L1MEc LINE L1 2609 3021 -3405 2722 26 0 3 chr2 190771465 190771776 -62484807 + AluY SINE Alu 1 310 -1 2371 272 85 33 chr2 190771776 190772453 -62484130 + L1MEc LINE L1 3021 3767 -2659 2687 161 36 9 chr2 190772496 190772962 -62483621 - LTR12 LTR ERV1 -132 582 104 1429 66 0 0 chr2 190773076 190773259 -62483324 + AluY SINE Alu 119 301 -10 4337 138 28 33 chr2 190773527 190774316 -62482267 - LTR1 LTR ERV1 0 785 1 21 0 0 0 chr2 190775686 190775707 -62480876 + AT_rich Low_complexity Low_complexity 1 21 0 2544 125 3 0 chr2 190775921 190776282 -62480301 - THE1B LTR MaLR 0 364 3 364 305 57 72 chr2 190776712 190777030 -62479553 - MLT1H LTR MaLR -214 335 23 26905 71 1 4 chr2 190777860 190781319 -62475264 - HERVK14C LTR ERVK -1338 6079 2632 16443 88 6 3 chr2 190781325 190783520 -62473063 - HERVK14C LTR ERVK -5215 2202 3 264 122 0 0 chr2 190783522 190783563 -62473020 - LTR14C LTR ERVK -1 586 546 628 352 49 38 chr2 190784003 190784509 -62472074 + HERVL LTR ERVL 2124 2635 -3019 289 270 111 8 chr2 190785779 190785905 -62470678 - HERVL LTR ERVL -3622 2032 1894 23 0 0 0 chr2 190786087 190786110 -62470473 + AT_rich Low_complexity Low_complexity 1 23 0 3159 190 45 12 chr2 190786249 190786934 -62469649 + MER67C LTR ERV1 3 710 0 2244 74 0 27 chr2 190788716 190789015 -62467568 - AluSc SINE Alu -17 292 2 29 84 0 0 chr2 190790217 190790288 -62466295 + AT_rich Low_complexity Low_complexity 1 71 0 180 111 0 0 chr2 190790304 190790331 -62466252 + (CATA)n Simple_repeat Simple_repeat 3 29 0 262 336 83 36 chr2 190790494 190790771 -62465812 - L2 LINE L2 -2399 915 626 226 354 107 17 chr2 190791068 190791246 -62465337 - L3 LINE CR1 -130 1447 1254 191 385 0 0 chr2 190791546 190791624 -62464959 - L3 LINE CR1 -306 1271 1194 213 323 125 10 chr2 190791742 190791838 -62464745 - L3 LINE CR1 -530 1047 941 1128 210 4 17 chr2 190792512 190792750 -62463833 - L1PB4 LINE L1 -11 6145 5911 7205 159 42 27 chr2 190795320 190795472 -62461111 - HUERS-P1 LTR ERV1 -4869 1394 1246 279 0 0 0 chr2 190795472 190795503 -62461080 + (CA)n Simple_repeat Simple_repeat 2 32 0 7205 159 42 27 chr2 190795503 190796723 -62459860 - HUERS-P1 LTR ERV1 -5017 1246 1 977 149 27 0 chr2 190796723 190796871 -62459712 - LTR8 LTR ERV1 0 691 540 23 33 0 0 chr2 190798025 190798055 -62458528 + AT_rich Low_complexity Low_complexity 1 30 0 2250 83 0 10 chr2 190798120 190798422 -62458161 - AluSg SINE Alu -11 299 1 205 182 0 0 chr2 190798509 190798542 -62458041 + (TATATG)n Simple_repeat Simple_repeat 3 35 0 186 43 0 0 chr2 190798629 190798652 -62457931 + (TAA)n Simple_repeat Simple_repeat 3 25 0 258 176 0 0 chr2 190798764 190798815 -62457768 + (CATATA)n Simple_repeat Simple_repeat 4 54 0 22 0 0 0 chr2 190798837 190798859 -62457724 + AT_rich Low_complexity Low_complexity 1 22 0 363 295 112 48 chr2 190801775 190801875 -62454708 + L1MC/D LINE L1 5260 5352 -2690 195 42 0 0 chr2 190801875 190801899 -62454684 + (CA)n Simple_repeat Simple_repeat 2 25 0 363 295 112 48 chr2 190801899 190802110 -62454473 + L1MC/D LINE L1 5352 5591 -2451 1558 285 208 31 chr2 190802462 190803472 -62453111 - L2 LINE L2 -374 2940 1752 605 366 128 6 chr2 190803478 190803980 -62452603 - L2 LINE L2 -1832 1482 920 699 337 63 11 chr2 190803980 190804327 -62452256 - L2 LINE L2 -2742 572 208 22 0 0 0 chr2 190804670 190804692 -62451891 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 190804800 190804828 -62451755 + AT_rich Low_complexity Low_complexity 1 28 0 22 70 0 0 chr2 190804997 190805040 -62451543 + AT_rich Low_complexity Low_complexity 1 43 0 25 83 0 0 chr2 190805357 190805417 -62451166 + AT_rich Low_complexity Low_complexity 1 60 0 184 301 68 14 chr2 190805805 190805878 -62450705 + MIR SINE MIR 160 236 -26 21 0 0 0 chr2 190805890 190805911 -62450672 + AT_rich Low_complexity Low_complexity 1 21 0 226 364 22 65 chr2 190806753 190806984 -62449599 - MLT1I LTR MaLR -89 320 100 237 33 0 0 chr2 190807118 190807148 -62449435 + (CA)n Simple_repeat Simple_repeat 1 30 0 180 0 0 0 chr2 190808016 190808036 -62448547 + (TTTTA)n Simple_repeat Simple_repeat 3 22 0 1995 128 0 0 chr2 190808044 190808318 -62448265 - AluSx SINE Alu -38 274 1 268 286 62 18 chr2 190808321 190808433 -62448150 - L2 LINE L2 -7 3306 3190 547 289 175 23 chr2 190808533 190808841 -62447742 + L2 LINE L2 2954 3308 -5 984 318 27 25 chr2 190809517 190809882 -62446701 + MLT1E3 LTR MaLR 139 504 -120 290 253 0 13 chr2 190811281 190811356 -62445227 + (CATATA)n Simple_repeat Simple_repeat 4 77 0 553 208 40 0 chr2 190811789 190811914 -62444669 - L1PA16 LINE L1 -16 6150 6021 412 302 131 1 chr2 190812249 190812455 -62444128 - L2 LINE L2 -304 3009 2780 333 68 0 0 chr2 190813566 190813610 -62442973 + (TG)n Simple_repeat Simple_repeat 1 44 0 22 70 0 0 chr2 190814930 190814973 -62441610 + AT_rich Low_complexity Low_complexity 1 43 0 214 169 14 14 chr2 190815151 190815222 -62441361 + (TA)n Simple_repeat Simple_repeat 1 71 0 21 0 0 0 chr2 190815373 190815394 -62441189 + AT_rich Low_complexity Low_complexity 1 21 0 256 299 130 33 chr2 190815762 190815946 -62440637 - MIR SINE MIR -33 229 28 180 0 0 0 chr2 190816221 190816241 -62440342 + (TA)n Simple_repeat Simple_repeat 1 20 0 242 209 0 30 chr2 190816302 190816369 -62440214 - L1MC4 LINE L1 -1337 6705 6641 254 45 91 0 chr2 190816702 190816746 -62439837 + L1P LINE L1 3233 3280 -2866 186 152 0 0 chr2 190817271 190817304 -62439279 + MIR SINE MIR 97 129 -133 34 55 0 0 chr2 190818298 190818353 -62438230 + AT_rich Low_complexity Low_complexity 1 55 0 191 364 0 57 chr2 190819239 190819327 -62437256 - L2 LINE L2 -2 3270 3188 351 317 92 46 chr2 190819538 190819778 -62436805 + MIR SINE MIR 1 251 -11 27 73 0 0 chr2 190821109 190821164 -62435419 + AT_rich Low_complexity Low_complexity 1 55 0 207 250 107 0 chr2 190821229 190821285 -62435298 - MIR SINE MIR -77 185 124 483 171 0 0 chr2 190821689 190821777 -62434806 - L1 LINE L1 -2106 4040 3953 * 2087 181 30 7 chr2 190821770 190821900 -62434683 + L1MA6 LINE L1 5159 5284 -1016 183 42 0 0 chr2 190821900 190821924 -62434659 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 2087 181 30 7 chr2 190821924 190822302 -62434281 + L1MA6 LINE L1 5284 5676 -624 1386 175 41 10 chr2 190822402 190822693 -62433890 + L1MA6 LINE L1 6001 6300 0 810 279 47 36 chr2 190822737 190823102 -62433481 - MLT1L LTR MaLR -239 376 8 281 330 57 19 chr2 190823197 190823303 -62433280 + MER91C DNA MER1_type 31 140 0 439 292 73 6 chr2 190823419 190823597 -62432986 - MIR SINE MIR -8 254 65 22 35 0 0 chr2 190823967 190823996 -62432587 + AT_rich Low_complexity Low_complexity 1 29 0 211 363 84 6 chr2 190824112 190824291 -62432292 + MIR SINE MIR 56 248 -14 362 198 47 35 chr2 190824314 190824400 -62432183 - Tigger7 DNA MER2_type 0 2587 2501 279 93 0 0 chr2 190824420 190824463 -62432120 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 1211 198 36 75 chr2 190824474 190824752 -62431831 - Tigger7 DNA MER2_type -466 267 1 21 0 0 0 chr2 190825009 190825030 -62431553 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 190825112 190825140 -62431443 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 190825385 190825406 -62431177 + AT_rich Low_complexity Low_complexity 1 21 0 29 60 0 0 chr2 190826119 190826169 -62430414 + AT_rich Low_complexity Low_complexity 1 50 0 1986 144 0 17 chr2 190826169 190826467 -62430116 - AluSx SINE Alu -14 298 6 338 236 28 0 chr2 190826472 190826544 -62430039 - MLT2D LTR ERVL -48 366 293 4526 179 66 18 chr2 190826546 190827300 -62429283 + L1MCa LINE L1 29 840 -5586 318 50 0 0 chr2 190827300 190827340 -62429243 + (CA)n Simple_repeat Simple_repeat 1 40 0 4526 179 66 18 chr2 190827340 190827536 -62429047 + L1MCa LINE L1 840 1025 -5401 251 175 18 0 chr2 190830735 190830792 -62425791 + (TA)n Simple_repeat Simple_repeat 1 58 0 1766 135 52 0 chr2 190830794 190831061 -62425522 - AluSx SINE Alu -26 286 6 472 204 0 0 chr2 190831165 190831263 -62425320 + AluSg/x SINE Alu 203 300 -9 301 304 152 22 chr2 190831275 190831459 -62425124 + L1MCa LINE L1 1223 1430 -5177 7182 46 9 0 chr2 190831464 190832487 -62424096 + L1PA7 LINE L1 5124 6154 0 657 282 53 61 chr2 190832496 190832741 -62423842 + MLT2F LTR ERVL 348 590 -73 25 51 0 0 chr2 190833191 190833230 -62423353 + AT_rich Low_complexity Low_complexity 1 39 0 21 71 0 0 chr2 190834716 190834758 -62421825 + AT_rich Low_complexity Low_complexity 1 42 0 2246 73 0 3 chr2 190834781 190835069 -62421514 + AluY SINE Alu 10 296 -15 216 0 0 0 chr2 190835600 190835624 -62420959 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2032 106 0 14 chr2 190835626 190835908 -62420675 - AluSc SINE Alu -31 278 1 29 70 0 0 chr2 190837087 190837144 -62419439 + AT_rich Low_complexity Low_complexity 1 57 0 2141 104 4 0 chr2 190837947 190838249 -62418334 + AluSc SINE Alu 2 304 0 292 231 154 60 chr2 190838430 190838547 -62418036 + FLAM_C SINE Alu 5 132 -1 631 97 11 0 chr2 190838601 190838694 -62417889 - L1PA15 LINE L1 -202 5963 5870 1037 138 0 6 chr2 190838696 190838863 -62417720 + L1PA15 LINE L1 6000 6165 0 1180 171 19 0 chr2 190838864 190839075 -62417508 + L1MB3 LINE L1 5961 6175 -8 28 29 0 0 chr2 190839994 190840029 -62416554 + AT_rich Low_complexity Low_complexity 1 35 0 527 227 43 77 chr2 190840206 190840413 -62416170 - L1MB8 LINE L1 -3 6175 5976 1990 251 82 66 chr2 190840536 190841538 -62415045 - L1MEc LINE L1 -2930 4027 3014 2300 91 0 0 chr2 190841538 190841835 -62414748 - AluY SINE Alu -14 297 1 1990 251 82 66 chr2 190841835 190841977 -62414606 - L1MEc LINE L1 -3943 3014 2876 1152 281 73 76 chr2 190842040 190843139 -62413444 - L1MEc LINE L1 -4591 2368 1274 1686 299 64 36 chr2 190843139 190843700 -62412883 - L1MEc LINE L1 -6274 585 9 1018 217 26 0 chr2 190843879 190844109 -62412474 - MER46A DNA MER2_type 0 236 1 1603 140 10 67 chr2 190844281 190844595 -62411988 - AluSx SINE Alu -16 296 1 1690 174 0 14 chr2 190847179 190847461 -62409122 + AluJo SINE Alu 10 287 -25 200 333 0 0 chr2 190847500 190847551 -62409032 - L2 LINE L2 -12 3260 3210 21 36 0 0 chr2 190849838 190849866 -62406717 + AT_rich Low_complexity Low_complexity 1 28 0 2155 107 3 0 chr2 190850119 190850410 -62406173 - AluSg SINE Alu -18 292 1 2981 235 12 16 chr2 190850798 190851529 -62405054 - L1MB7 LINE L1 -8 6176 5449 4996 258 56 21 chr2 190851531 190851748 -62404835 - L1M4 LINE L1 -599 6073 5865 2271 73 3 22 chr2 190851748 190852065 -62404518 - AluY SINE Alu 0 311 1 4996 258 56 21 chr2 190852065 190853999 -62402584 - L1M4 LINE L1 -807 5865 3844 827 274 28 93 chr2 190854057 190854242 -62402341 - L1M4 LINE L1 -5794 748 553 1746 163 7 0 chr2 190854242 190854518 -62402065 - AluSx SINE Alu -24 288 11 827 274 28 93 chr2 190854518 190854763 -62401820 - L1M4 LINE L1 -5989 553 346 6130 159 9 9 chr2 190854783 190856712 -62399871 + L1PB1 LINE L1 4223 6147 -4 2158 196 48 40 chr2 190856952 190857457 -62399126 - MER52A LTR ERV1 0 1755 1247 690 253 172 24 chr2 190857505 190857904 -62398679 - MER52A LTR ERV1 -688 590 217 485 312 39 66 chr2 190857921 190858254 -62398329 - L1M4 LINE L1 -6197 345 22 431 182 29 168 chr2 190858566 190858678 -62397905 + MER31B LTR ERV1 6 77 -408 2545 112 2 18 chr2 190858678 190859072 -62397511 - L1PA11 LINE L1 -8 6166 5779 431 182 29 168 chr2 190859072 190859168 -62397415 + MER31B LTR ERV1 77 185 -300 396 285 65 45 chr2 190859292 190859492 -62397091 + L1M4 LINE L1 3981 4184 -1962 24 0 0 0 chr2 190859574 190859598 -62396985 + AT_rich Low_complexity Low_complexity 1 24 0 529 283 83 24 chr2 190860042 190860332 -62396251 + L1MB8 LINE L1 5871 6177 -1 1575 165 47 17 chr2 190860597 190860894 -62395689 - AluJo SINE Alu -6 306 1 5244 130 29 17 chr2 190862241 190862693 -62393890 + L1PA16 LINE L1 4876 5321 -845 2236 104 0 3 chr2 190862693 190862992 -62393591 + AluSc SINE Alu 1 298 -11 5244 130 29 17 chr2 190862992 190863810 -62392773 + L1PA16 LINE L1 5321 6157 -9 320 267 62 6 chr2 190864123 190864284 -62392299 + Charlie2 DNA MER1_type 2693 2862 0 613 182 28 35 chr2 190864386 190864529 -62392054 - L1M4 LINE L1 -571 5607 5466 330 293 9 19 chr2 190864527 190864633 -62391950 - L1M4 LINE L1 -6019 523 419 * 2050 118 53 31 chr2 190865175 190865531 -62391052 + THE1B LTR MaLR 1 364 0 228 274 14 0 chr2 190865850 190865923 -62390660 + (TGAA)n Simple_repeat Simple_repeat 3 76 0 24 53 0 0 chr2 190867682 190867720 -62388863 + AT_rich Low_complexity Low_complexity 1 38 0 700 210 37 0 chr2 190867855 190868017 -62388566 - L1M3c LINE L1 -5015 1126 959 3675 202 51 15 chr2 190868459 190868699 -62387884 + L1MA9 LINE L1 4395 4625 -1666 1932 156 7 0 chr2 190868699 190869007 -62387576 + AluSx SINE Alu 3 312 0 3675 202 51 15 chr2 190869007 190870121 -62386462 + L1MA9 LINE L1 4625 5793 -498 1193 157 12 28 chr2 190870260 190870509 -62386074 + L1MA9 LINE L1 6068 6312 0 207 0 0 0 chr2 190871489 190871512 -62385071 + (TTG)n Simple_repeat Simple_repeat 2 24 0 24 0 0 0 chr2 190872075 190872099 -62384484 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 190873045 190873066 -62383517 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr2 190874028 190874050 -62382533 + (T)n Simple_repeat Simple_repeat 1 22 0 697 207 0 0 chr2 190874520 190874641 -62381942 + FLAM_A SINE Alu 1 121 -12 1516 92 55 0 chr2 190874680 190874897 -62381686 - MER30 DNA MER1_type 0 230 2 797 313 160 66 chr2 190875782 190875986 -62380597 + L2 LINE L2 1587 1770 -1544 1732 223 21 45 chr2 190875986 190876457 -62380126 - MER74C LTR ERVL 0 460 1 797 313 160 66 chr2 190876457 190877524 -62379059 + L2 LINE L2 1770 2977 -337 975 287 64 80 chr2 190877630 190878075 -62378508 - MLT1E2 LTR MaLR 0 626 192 1860 94 19 0 chr2 190878075 190878342 -62378241 - L1PA13 LINE L1 -3 6160 5889 975 287 64 80 chr2 190878342 190878520 -62378063 - MLT1E2 LTR MaLR -434 192 13 261 98 0 0 chr2 190879465 190879506 -62377077 + (TG)n Simple_repeat Simple_repeat 1 41 0 28 61 0 0 chr2 190879529 190879578 -62377005 + AT_rich Low_complexity Low_complexity 1 49 0 720 277 50 36 chr2 190880116 190880394 -62376189 + L2 LINE L2 801 1082 -2232 270 333 0 0 chr2 190880387 190880474 -62376109 + L2 LINE L2 3182 3268 -4 * 239 318 34 47 chr2 190880523 190880671 -62375912 - MIR3 SINE MIR -49 159 14 1310 206 62 79 chr2 190882535 190883005 -62373578 - MLT2C2 LTR ERVL 0 464 3 2373 57 0 16 chr2 190883690 190884004 -62372579 - AluY SINE Alu -2 309 1 410 255 88 59 chr2 190884576 190884780 -62371803 + LTR50 LTR ERVL 7 216 -579 250 343 124 0 chr2 190884843 190885044 -62371539 + LTR50 LTR ERVL 446 671 -124 461 17 17 0 chr2 190886090 190886148 -62370435 + (TTCC)n Simple_repeat Simple_repeat 2 60 0 234 0 0 0 chr2 190886624 190886650 -62369933 + (A)n Simple_repeat Simple_repeat 1 26 0 657 177 30 0 chr2 190887901 190888065 -62368518 + CT-rich Low_complexity Low_complexity 4 172 0 434 291 213 10 chr2 190888167 190888463 -62368120 - LTR50 LTR ERVL -26 769 414 316 230 70 20 chr2 190888667 190888767 -62367816 - LTR50 LTR ERVL -680 115 11 359 332 77 28 chr2 190889326 190889573 -62367010 - ERVL LTR ERVL -585 5179 4921 380 236 4 59 chr2 190889689 190889868 -62366715 + MLT1E2 LTR MaLR 59 200 -305 1380 256 23 46 chr2 190889898 190890331 -62366252 + MLT1E2 LTR MaLR 201 623 -3 404 339 106 17 chr2 190890349 190890942 -62365641 - ERVL LTR ERVL -719 4766 4123 1429 136 9 4 chr2 190890943 190891171 -62365412 + AluSg/x SINE Alu 75 303 -9 396 238 0 0 chr2 190891172 190891252 -62365331 - ERVL LTR ERVL -1630 4134 4055 748 339 64 32 chr2 190891261 190891367 -62365216 - ERVL LTR ERVL -1558 3927 3826 474 18 0 0 chr2 190891367 190891422 -62365161 + (TCTA)n Simple_repeat Simple_repeat 3 57 0 748 339 64 32 chr2 190891422 190891938 -62364645 - ERVL LTR ERVL -1659 3826 3285 591 266 13 13 chr2 190892648 190892802 -62363781 - ERVL LTR ERVL -3304 2460 2307 261 254 28 14 chr2 190892818 190892889 -62363694 - ERVL LTR ERVL -4093 1561 1490 279 357 62 52 chr2 190893604 190893909 -62362674 - ERVL LTR ERVL -5076 688 381 271 289 95 47 chr2 190894406 190894474 -62362109 - LTR50 LTR ERVL -271 524 461 1934 147 3 6 chr2 190894474 190894786 -62361797 + AluJb SINE Alu 1 311 -1 271 289 95 47 chr2 190894786 190894907 -62361676 - LTR50 LTR ERVL -334 461 326 533 363 4 13 chr2 190895689 190895915 -62360668 + L1PA13 LINE L1 1 224 -6563 * 3254 176 26 9 chr2 190895914 190896222 -62360361 + L1PA16 LINE L1 4750 5051 -1115 1828 149 58 30 chr2 190896222 190896585 -62359998 - THE1C LTR MaLR 0 375 3 3254 176 26 9 chr2 190896585 190897299 -62359284 + L1PA16 LINE L1 5051 5791 -375 329 261 23 0 chr2 190897305 190897393 -62359190 - L1MC4 LINE L1 -1339 6703 6614 316 278 0 22 chr2 190897320 190897410 -62359173 + L1MC4 LINE L1 6615 6702 -1340 * 2017 169 25 0 chr2 190897421 190897787 -62358796 + L1PA16 LINE L1 5783 6157 -9 221 331 110 39 chr2 190897964 190898091 -62358492 + L2 LINE L2 3136 3271 -1 371 343 84 13 chr2 190898466 190898705 -62357878 + MIR SINE MIR 2 257 -5 243 341 8 24 chr2 190899294 190899417 -62357166 + MIR3 SINE MIR 41 161 -47 212 292 31 0 chr2 190999679 190999775 -62256808 + (GGGTG)n Simple_repeat Simple_repeat 3 101 0 1611 122 52 7 chr2 190999789 191000075 -62256508 - HERVL LTR ERVL -647 5007 4709 443 61 61 0 chr2 191000079 191000145 -62256438 + HERVL LTR ERVL 4842 4911 -743 183 100 0 0 chr2 191000145 191000175 -62256408 + (TA)n Simple_repeat Simple_repeat 1 30 0 205 103 17 52 chr2 191000193 191000251 -62256332 + (TTA)n Simple_repeat Simple_repeat 1 56 0 446 119 0 0 chr2 191000260 191000327 -62256256 + MLT2A1 LTR ERVL 313 379 -65 248 126 63 42 chr2 191000347 191000442 -62256141 + (TTATA)n Simple_repeat Simple_repeat 3 99 0 3859 190 39 39 chr2 191000489 191001577 -62255006 - L1MB3 LINE L1 -7 6176 5099 350 313 27 27 chr2 191001577 191001724 -62254859 - MIR SINE MIR -93 169 23 1281 150 0 5 chr2 191002160 191002360 -62254223 + AluSg/x SINE Alu 82 280 -32 192 125 0 0 chr2 191002734 191002766 -62253817 + (GGGA)n Simple_repeat Simple_repeat 4 35 0 21 0 0 0 chr2 191002787 191002808 -62253775 + AT_rich Low_complexity Low_complexity 1 21 0 293 182 80 23 chr2 191003338 191003426 -62253157 + L1MC/D LINE L1 5728 5820 -1988 406 231 8 34 chr2 191003995 191004112 -62252471 + MIR SINE MIR 31 144 -118 21 71 0 0 chr2 191004502 191004544 -62252039 + AT_rich Low_complexity Low_complexity 1 42 0 383 137 41 0 chr2 191004901 191004974 -62251609 + MLT1C LTR MaLR 3 78 -389 1679 179 58 42 chr2 191004983 191005362 -62251221 - MLT1B LTR MaLR -5 385 1 292 368 92 54 chr2 191007069 191007493 -62249090 - L2 LINE L2 -8 3264 2825 560 175 0 4 chr2 191008175 191008325 -62248258 + MER67C LTR ERV1 198 397 -313 442 132 13 0 chr2 191008395 191008471 -62248112 + MER67D LTR ERV1 432 508 -6 215 281 37 49 chr2 191009011 191009093 -62247490 + MIR3 SINE MIR 7 87 -121 443 269 82 32 chr2 191009136 191009333 -62247250 + MIR SINE MIR 7 205 -57 21 71 0 0 chr2 191010914 191010956 -62245627 + AT_rich Low_complexity Low_complexity 1 42 0 796 216 93 39 chr2 191011321 191011525 -62245058 - MER20 DNA MER1_type -3 216 2 374 360 63 62 chr2 191011550 191012004 -62244579 - L2 LINE L2 0 3272 2748 24 0 0 0 chr2 191013497 191013521 -62243062 + AT_rich Low_complexity Low_complexity 1 24 0 2139 106 3 0 chr2 191013521 191013852 -62242731 + AluSx SINE Alu 1 332 0 623 189 8 0 chr2 191013938 191014070 -62242513 + GA-rich Low_complexity Low_complexity 4 136 0 1778 173 0 7 chr2 191014948 191015237 -62241346 + AluJo SINE Alu 6 292 -20 341 290 11 11 chr2 191015691 191015784 -62240799 + L2 LINE L2 3172 3264 -8 904 229 4 74 chr2 191016295 191016526 -62240057 - MER20 DNA MER1_type -3 216 2 269 278 150 38 chr2 191018461 191018594 -62237989 + L2 LINE L2 3125 3272 0 340 160 0 27 chr2 191019988 191020063 -62236520 - MER69 DNA AcHobo -1079 147 75 297 211 279 0 chr2 191020647 191020751 -62235832 + MER5B DNA MER1_type 2 134 -44 351 0 0 0 chr2 191021439 191021478 -62235105 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 1822 168 7 7 chr2 191021632 191021930 -62234653 + AluJb SINE Alu 2 299 -13 2006 124 31 0 chr2 191023051 191023342 -62233241 + AluSx SINE Alu 3 302 -10 614 212 103 6 chr2 191023549 191023714 -62232869 - MLT1G LTR MaLR 0 590 410 820 191 91 33 chr2 191023737 191023985 -62232598 + MER52C LTR ERV1 13 199 -1079 * 926 236 98 19 chr2 191023982 191024309 -62232274 - MLT1G LTR MaLR -233 320 9 328 213 0 53 chr2 191024443 191024537 -62232046 + MER53 DNA DNA 101 189 0 5316 191 123 13 chr2 191025768 191027140 -62229443 - MER52A LTR ERV1 0 1755 1 237 206 100 14 chr2 191027241 191027331 -62229252 + MLT1G LTR MaLR 454 583 0 464 48 16 0 chr2 191027732 191027795 -62228788 + (CATA)n Simple_repeat Simple_repeat 2 65 0 1897 117 4 11 chr2 191028091 191028372 -62228211 - AluSq SINE Alu 0 313 35 25 0 0 0 chr2 191028595 191028620 -62227963 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr2 191028737 191028761 -62227822 + AT_rich Low_complexity Low_complexity 1 24 0 27 49 0 0 chr2 191028905 191028946 -62227637 + AT_rich Low_complexity Low_complexity 1 41 0 386 256 124 116 chr2 191029992 191030363 -62226220 + MLT1I LTR MaLR 1 374 -35 186 43 0 0 chr2 191030902 191030925 -62225658 + (TATG)n Simple_repeat Simple_repeat 3 25 0 2151 112 0 26 chr2 191030929 191031234 -62225349 - AluSg SINE Alu -13 297 1 727 286 86 51 chr2 191031288 191031616 -62224967 - L2 LINE L2 -34 3279 2935 3202 112 29 18 chr2 191031616 191032108 -62224475 - LOR1a LTR ERV1 0 497 1 727 286 86 51 chr2 191032108 191032153 -62224430 - L2 LINE L2 -378 2935 2893 1260 191 21 8 chr2 191032189 191032425 -62224158 + MER8 DNA MER2_type 1 239 0 669 298 48 28 chr2 191032485 191032774 -62223809 - LTR16A LTR ERVL 0 450 156 1655 108 44 48 chr2 191032774 191033069 -62223514 + MER39B LTR ERV1 1 294 -359 4453 145 107 27 chr2 191033083 191034466 -62222117 + pTR5 LTR ERV1 776 2438 0 1903 163 19 22 chr2 191034469 191034526 -62222057 + MER39B LTR ERV1 293 349 -304 2184 123 3 0 chr2 191034526 191034826 -62221757 + AluSx SINE Alu 5 305 -7 1903 163 19 22 chr2 191034826 191035130 -62221453 + MER39B LTR ERV1 349 653 0 249 251 5 70 chr2 191035373 191035560 -62221023 + A-rich Low_complexity Low_complexity 4 178 0 202 389 93 0 chr2 191036330 191036438 -62220145 - L3b LINE CR1 -88 1495 1378 2322 87 0 7 chr2 191037994 191038293 -62218290 + AluY SINE Alu 1 297 -14 201 276 52 0 chr2 191038425 191038483 -62218100 + MIR SINE MIR 49 109 -153 1780 233 82 0 chr2 191038517 191039003 -62217580 + MER119 DNA MER1_type 55 580 -3 315 271 121 29 chr2 191039009 191039149 -62217434 + MIR SINE MIR 107 259 -3 2301 109 3 7 chr2 191039268 191039571 -62217012 - AluSx SINE Alu -10 302 1 256 132 0 0 chr2 191039999 191040037 -62216546 + MER119 DNA MER1_type 185 222 -361 1897 165 9 94 chr2 191040304 191040729 -62215854 - MSTD LTR MaLR -7 389 1 335 288 65 59 chr2 191040743 191040896 -62215687 + MIR SINE MIR 92 245 -17 334 217 54 33 chr2 191040980 191041072 -62215511 - MIR SINE MIR -81 181 88 599 210 39 66 chr2 191041417 191041598 -62214985 + MER5B DNA MER1_type 2 177 -1 2510 230 30 18 chr2 191041732 191042295 -62214288 + MER77 LTR ERV1 54 674 -4 192 309 79 29 chr2 191042427 191042566 -62214017 + L2 LINE L2 2920 3065 -248 219 227 364 0 chr2 191043481 191043569 -62213014 + L2 LINE L2 3153 3272 0 1230 228 127 14 chr2 191044450 191044805 -62211778 - MSTD LTR MaLR -1 395 1 24 77 0 0 chr2 191044868 191044920 -62211663 + AT_rich Low_complexity Low_complexity 1 52 0 22 0 0 0 chr2 191046286 191046308 -62210275 + AT_rich Low_complexity Low_complexity 1 22 0 401 259 63 46 chr2 191046923 191047097 -62209486 - MER5B DNA MER1_type -1 177 1 2578 46 0 0 chr2 191048554 191048859 -62207724 + AluY SINE Alu 1 305 -6 1813 156 36 15 chr2 191049329 191049662 -62206921 + MER74C LTR ERVL 3 342 -118 1495 171 71 43 chr2 191049650 191050000 -62206583 + MLT1A2 LTR MaLR 15 374 0 * 1326 78 0 0 chr2 191051427 191051607 -62204976 + (TA)n Simple_repeat Simple_repeat 1 180 0 37 23 0 0 chr2 191051705 191051749 -62204834 + AT_rich Low_complexity Low_complexity 1 44 0 307 108 83 6 chr2 191051752 191051909 -62204674 + (TA)n Simple_repeat Simple_repeat 2 170 0 47 44 0 0 chr2 191051913 191051981 -62204602 + AT_rich Low_complexity Low_complexity 1 68 0 228 124 45 22 chr2 191051988 191052077 -62204506 + (TA)n Simple_repeat Simple_repeat 2 92 0 260 86 95 0 chr2 191052348 191052453 -62204130 + (TA)n Simple_repeat Simple_repeat 2 116 0 2303 112 0 3 chr2 191052672 191052984 -62203599 + AluSx SINE Alu 2 312 0 198 0 0 0 chr2 191053065 191053087 -62203496 + (CA)n Simple_repeat Simple_repeat 1 22 0 408 275 17 34 chr2 191053331 191053509 -62203074 + MER104 DNA Tc2 6 180 0 1992 235 76 39 chr2 191053803 191054368 -62202215 + MLT1E LTR MaLR 1 586 -7 336 271 182 42 chr2 191054539 191055109 -62201474 - L1ME4a LINE L1 -217 5904 5261 405 355 38 7 chr2 191055280 191055570 -62201013 - L1ME4a LINE L1 -1160 4986 4688 229 188 21 0 chr2 191055943 191055991 -62200592 - MLT2B1 LTR ERVL 0 520 472 1823 215 71 47 chr2 191056029 191056323 -62200260 - MLT2B1 LTR ERVL -44 476 165 1035 37 7 29 chr2 191056323 191056459 -62200124 - L1PA3 LINE L1 -4 6151 6019 1823 215 71 47 chr2 191056459 191056629 -62199954 - MLT2B1 LTR ERVL -355 165 1 1743 171 3 23 chr2 191058811 191059120 -62197463 + AluSx SINE Alu 1 303 -9 21 36 0 0 chr2 191060355 191060383 -62196200 + AT_rich Low_complexity Low_complexity 1 28 0 406 246 71 38 chr2 191060395 191060578 -62196005 - L1MC4a LINE L1 -1882 5926 5738 237 33 0 0 chr2 191060680 191060710 -62195873 + (TC)n Simple_repeat Simple_repeat 1 30 0 357 103 17 0 chr2 191060781 191060839 -62195744 - L1MA9 LINE L1 0 6312 6254 2366 81 0 10 chr2 191060957 191061267 -62195316 - AluY SINE Alu -4 307 1 2112 215 91 35 chr2 191061673 191062222 -62194361 - MLT1E2 LTR MaLR -41 585 6 880 254 76 32 chr2 191062620 191062649 -62193934 + L1MD3 LINE L1 7639 7665 -330 2109 125 3 3 chr2 191062649 191062944 -62193639 + AluSx SINE Alu 1 295 -17 880 254 76 32 chr2 191062944 191063256 -62193327 + L1MD3 LINE L1 7665 7995 0 2245 95 14 3 chr2 191063266 191063562 -62193021 + AluSx SINE Alu 1 299 -13 1667 175 7 0 chr2 191064315 191064589 -62191994 + AluSx SINE Alu 21 296 -16 236 131 66 0 chr2 191064858 191064919 -62191664 + (TA)n Simple_repeat Simple_repeat 1 65 0 483 314 98 37 chr2 191065039 191065548 -62191035 + HAL1b LINE L1 394 933 -415 2208 131 0 0 chr2 191065747 191066052 -62190531 + AluSx SINE Alu 1 305 -7 22 56 0 0 chr2 191067182 191067218 -62189365 + AT_rich Low_complexity Low_complexity 1 36 0 309 235 20 51 chr2 191067314 191067412 -62189171 - MLT1K LTR MaLR -123 465 371 423 217 0 11 chr2 191067472 191067564 -62189019 - MLT1K LTR MaLR -339 249 159 200 270 130 20 chr2 191068255 191068355 -62188228 - MIR SINE MIR -92 170 60 279 0 0 0 chr2 191069138 191069169 -62187414 + (CA)n Simple_repeat Simple_repeat 2 32 0 401 36 0 18 chr2 191069273 191069329 -62187254 + (TG)n Simple_repeat Simple_repeat 2 56 0 272 281 61 17 chr2 191069586 191069724 -62186859 + MIR SINE MIR 42 183 -59 2421 62 0 3 chr2 191069993 191070285 -62186298 - AluY SINE Alu -12 299 9 1398 135 0 19 chr2 191071190 191071398 -62185185 + AluSx SINE Alu 18 221 -91 2200 95 14 0 chr2 191071415 191071709 -62184874 + AluSg SINE Alu 1 298 -12 226 228 45 160 chr2 191073015 191073214 -62183369 + MER5B DNA MER1_type 4 189 0 1608 139 6 97 chr2 191073401 191073732 -62182851 + AluJo SINE Alu 1 301 -11 1615 142 0 111 chr2 191074497 191074635 -62181948 + AluJo SINE Alu 1 84 -228 2100 121 0 0 chr2 191074635 191074916 -62181667 - AluSg1 SINE Alu -28 281 1 1615 142 0 111 chr2 191074916 191075102 -62181481 + AluJo SINE Alu 84 289 -23 1854 162 0 16 chr2 191075989 191076315 -62180268 - AluSq SINE Alu 0 313 1 564 364 163 4 chr2 191078260 191078788 -62177795 - ERVL LTR ERVL -934 4830 4219 1126 297 48 55 chr2 191078837 191079416 -62177167 - ERVL LTR ERVL -2883 2881 2307 576 311 72 37 chr2 191079442 191079763 -62176820 - ERVL LTR ERVL -3572 2082 1751 904 309 117 41 chr2 191079994 191080625 -62175958 - ERVL LTR ERVL -3568 1428 750 2299 91 0 0 chr2 191081951 191082238 -62174345 + AluSc SINE Alu 1 287 -22 21 36 0 0 chr2 191082694 191082722 -62173861 + AT_rich Low_complexity Low_complexity 1 28 0 395 287 102 30 chr2 191082892 191083059 -62173524 + MIR SINE MIR 70 248 -14 237 33 0 0 chr2 191083059 191083089 -62173494 + (A)n Simple_repeat Simple_repeat 1 30 0 1522 270 31 7 chr2 191083111 191083567 -62173016 - MLT1C LTR MaLR 0 467 1 25 0 0 0 chr2 191084064 191084089 -62172494 + AT_rich Low_complexity Low_complexity 1 25 0 185 315 139 9 chr2 191084637 191084745 -62171838 + MIR SINE MIR 20 141 -121 1629 228 115 41 chr2 191085372 191085981 -62170602 + MLT1E1 LTR MaLR 1 654 0 226 345 0 0 chr2 191086381 191086436 -62170147 - L2 LINE L2 -10 3262 3208 264 300 109 45 chr2 191086468 191086871 -62169712 + L1MC/D LINE L1 4023 4451 -1695 356 253 87 64 chr2 191086923 191087188 -62169395 + L1MC/D LINE L1 4561 4831 -1315 234 62 0 0 chr2 191087340 191087372 -62169211 + (A)n Simple_repeat Simple_repeat 1 32 0 6027 104 16 0 chr2 191087378 191088847 -62167736 + L1PA13 LINE L1 4670 6161 -2 357 317 59 5 chr2 191088894 191089080 -62167503 + L1MC/D LINE L1 5144 5339 -807 23 33 0 0 chr2 191089153 191089183 -62167400 + AT_rich Low_complexity Low_complexity 1 30 0 388 300 132 23 chr2 191089190 191089464 -62167119 + L1MC/D LINE L1 5546 5848 -352 6499 87 17 0 chr2 191090215 191091236 -62165347 + L1PA10 LINE L1 5119 6163 -5 2209 94 35 0 chr2 191091346 191091633 -62164950 + AluSp SINE Alu 1 297 -16 300 201 0 44 chr2 191091687 191091755 -62164828 - ERVL LTR ERVL -3320 2165 2104 1051 325 45 27 chr2 191091928 191092553 -62164030 - ERVL LTR ERVL -3721 1933 1298 423 209 0 0 chr2 191092654 191092740 -62163843 - MER58 DNA MER1_type -2 2418 2333 1285 224 194 14 chr2 191093554 191094063 -62162520 - LTR18B LTR ERVL -13 601 1 1971 124 45 95 chr2 191094767 191095209 -62161374 + LTR32 LTR ERVL 10 429 -42 580 276 0 28 chr2 191095308 191095489 -62161094 + MER5B DNA MER1_type 2 177 -1 256 247 105 93 chr2 191095547 191095709 -62160874 - MER5A DNA MER1_type -22 167 4 345 193 123 187 chr2 191095718 191095847 -62160736 - MER5A DNA MER1_type 0 189 74 2072 117 0 4 chr2 191095847 191096128 -62160455 - AluSx SINE Alu -32 280 1 345 193 123 187 chr2 191096128 191096185 -62160398 - MER5A DNA MER1_type -115 74 15 2211 74 0 58 chr2 191096185 191096497 -62160086 - AluY SINE Alu -17 294 1 2413 78 10 0 chr2 191096621 191096927 -62159656 - AluY SINE Alu -2 309 1 252 80 40 0 chr2 191097338 191097388 -62159195 + MADE1 DNA Mariner 29 80 0 312 161 71 0 chr2 191098356 191098412 -62158171 + LTR40b LTR ERVL 1 60 -402 23 54 0 0 chr2 191098586 191098623 -62157960 + AT_rich Low_complexity Low_complexity 1 37 0 306 0 0 0 chr2 191098998 191099032 -62157551 + (TA)n Simple_repeat Simple_repeat 2 35 0 473 310 48 11 chr2 191099033 191099220 -62157363 - MIR SINE MIR -68 194 1 6285 98 12 0 chr2 191099961 191101119 -62155464 - L1PA14 LINE L1 -2 6159 4996 8847 163 43 3 chr2 191101122 191102879 -62153704 + L1PA14 LINE L1 3164 4990 -1156 2188 96 7 0 chr2 191103151 191103461 -62153122 + AluSq SINE Alu 1 312 0 1171 169 86 0 chr2 191103750 191104005 -62152578 + L1MA6 LINE L1 5937 6213 -87 1229 131 0 0 chr2 191104008 191104176 -62152407 - AluSg/x SINE Alu -7 303 136 216 0 0 0 chr2 191104178 191104202 -62152381 + (TTA)n Simple_repeat Simple_repeat 2 25 0 2047 84 0 62 chr2 191104202 191104510 -62152073 - AluY SINE Alu -22 289 1 690 70 10 0 chr2 191104510 191104610 -62151973 + L1MA5 LINE L1 6198 6298 -2 292 336 24 64 chr2 191104714 191105044 -62151539 + L1MC/D LINE L1 4516 4832 -1314 1321 107 12 128 chr2 191105225 191105467 -62151116 - AluJb SINE Alu -14 298 85 2086 192 34 11 chr2 191105697 191106139 -62150444 - MER66A LTR ERV1 0 478 27 28 0 0 0 chr2 191106303 191106331 -62150252 + AT_rich Low_complexity Low_complexity 1 28 0 901 169 0 0 chr2 191106333 191106475 -62150108 - FRAM SINE Alu -30 146 5 22 0 0 0 chr2 191106577 191106599 -62149984 + AT_rich Low_complexity Low_complexity 1 22 0 2219 78 30 3 chr2 191106658 191106953 -62149630 - AluY SINE Alu -8 303 1 3077 143 14 0 chr2 191107171 191107661 -62148922 - LOR1a LTR ERV1 0 497 1 2268 78 47 0 chr2 191108088 191108384 -62148199 - AluSg SINE Alu 0 310 1 444 276 65 75 chr2 191108465 191108744 -62147839 + L1MC/D LINE L1 4980 5255 -891 366 315 120 38 chr2 191108769 191108845 -62147738 + L1MC/D LINE L1 5467 5535 -2273 2245 108 0 10 chr2 191108845 191109152 -62147431 + AluSp SINE Alu 1 304 -9 366 315 120 38 chr2 191109152 191109259 -62147324 + L1MC/D LINE L1 5535 5665 -2143 1782 110 0 0 chr2 191109565 191109793 -62146790 - AluSg/x SINE Alu -19 293 66 244 109 18 18 chr2 191110068 191110123 -62146460 + (TA)n Simple_repeat Simple_repeat 2 56 0 396 345 14 7 chr2 191110454 191110596 -62145987 + MIR SINE MIR 20 162 -100 359 292 20 15 chr2 191111217 191111412 -62145171 - L1M4 LINE L1 -2237 3909 3714 39837 58 5 1 chr2 191111562 191117676 -62138907 + L1PA5 LINE L1 11 6147 -7 217 51 51 0 chr2 191117676 191117715 -62138868 + (TA)n Simple_repeat Simple_repeat 1 41 0 984 140 0 0 chr2 191117964 191118107 -62138476 + FRAM SINE Alu 18 160 -16 559 220 44 18 chr2 191118171 191118398 -62138185 - L1MC5 LINE L1 -51 7910 7678 1845 217 67 38 chr2 191118404 191118638 -62137945 - L1M LINE L1 -743 5403 5177 2170 131 3 10 chr2 191118638 191118950 -62137633 - AluSq SINE Alu -3 310 1 1845 217 67 38 chr2 191118950 191119371 -62137212 - L1M LINE L1 -969 5177 4762 428 262 57 3 chr2 191119371 191119584 -62136999 - LTR40c LTR ERVL -186 279 1 190 289 174 8 chr2 191119671 191119792 -62136791 - L2 LINE L2 -1633 1681 1541 1457 153 95 0 chr2 191120149 191120423 -62136160 + L1MC1 LINE L1 32 331 -6095 * 6177 135 39 23 chr2 191120421 191120470 -62136113 + L1MC1 LINE L1 5427 5474 -1139 1791 58 18 4 chr2 191120470 191120696 -62135887 + AluY SINE Alu 83 311 0 6177 135 39 23 chr2 191120696 191121805 -62134778 + L1MC1 LINE L1 5474 6613 0 425 311 16 49 chr2 191122226 191122409 -62134174 + MIR SINE MIR 9 185 -77 182 268 0 0 chr2 191122953 191122994 -62133589 + MIR SINE MIR 216 256 -6 388 262 24 70 chr2 191123302 191123600 -62132983 + L1ME4a LINE L1 5614 5897 -224 502 284 133 18 chr2 191124744 191124962 -62131621 - MIR SINE MIR -12 250 8 1043 83 6 51 chr2 191125289 191125445 -62131138 + AluSx SINE Alu 1 149 -164 2348 98 0 0 chr2 191125445 191125751 -62130832 + AluSg SINE Alu 5 310 0 914 186 0 0 chr2 191125764 191125909 -62130674 + AluSx SINE Alu 129 273 -37 2498 62 0 3 chr2 191126026 191126334 -62130249 - AluY SINE Alu -4 307 1 1968 113 46 3 chr2 191126389 191126671 -62129912 - AluSx SINE Alu -16 296 3 2063 109 11 3 chr2 191127117 191127402 -62129181 - AluSx SINE Alu -25 287 1 201 314 95 38 chr2 191127431 191127536 -62129047 - L2 LINE L2 -37 3235 3125 421 292 76 14 chr2 191128629 191128834 -62127749 + MIR SINE MIR 35 249 -13 2156 106 3 31 chr2 191128918 191129238 -62127345 + AluSq SINE Alu 1 311 -2 1337 215 131 15 chr2 191129528 191129932 -62126651 - Charlie1b DNA MER1_type -72 451 1 1930 149 0 26 chr2 191130504 191130813 -62125770 - AluSx SINE Alu -11 301 1 216 214 10 117 chr2 191131946 191132049 -62124534 - MIR SINE MIR -35 227 136 1993 236 65 17 chr2 191132049 191132803 -62123780 + L1M4 LINE L1 2877 3666 -2480 2194 110 9 9 chr2 191132815 191133161 -62123422 + L1MA5 LINE L1 5952 6297 -3 225 293 52 0 chr2 191133161 191133219 -62123364 + MIR SINE MIR 25 85 -177 870 62 0 0 chr2 191133221 191133334 -62123249 - THE1B LTR MaLR -251 113 1 823 106 86 16 chr2 191133462 191133742 -62122841 - THE1C LTR MaLR 0 375 1 867 252 14 5 chr2 191133742 191133956 -62122627 + MIR SINE MIR 44 259 -3 405 335 13 19 chr2 191133990 191134145 -62122438 + MIR3 SINE MIR 41 194 -14 199 267 185 34 chr2 191134422 191134568 -62122015 - L2 LINE L2 -36 3277 3110 2272 117 0 0 chr2 191134887 191135194 -62121389 - AluSc SINE Alu -2 307 1 22 0 0 0 chr2 191135209 191135231 -62121352 + AT_rich Low_complexity Low_complexity 1 22 0 2767 168 34 15 chr2 191135231 191135819 -62120764 - L1MA9 LINE L1 -22 6290 5692 434 365 6 6 chr2 191135819 191136000 -62120583 + L2 LINE L2 2527 2707 -607 2945 245 200 14 chr2 191136314 191137508 -62119075 + L1MC4 LINE L1 6488 7903 -139 2390 97 0 0 chr2 191137547 191137855 -62118728 - AluY SINE Alu -3 308 1 388 333 101 35 chr2 191137858 191138116 -62118467 + L2 LINE L2 2695 2969 -345 208 173 96 19 chr2 191138291 191138343 -62118240 + L2 LINE L2 3168 3223 -49 1962 129 0 0 chr2 191138379 191138635 -62117948 + AluSq SINE Alu 34 289 -24 557 322 66 10 chr2 191138717 191139018 -62117565 + L2 LINE L2 1638 1955 -1359 385 282 91 0 chr2 191139123 191139233 -62117350 - L2 LINE L2 -1 3312 3193 237 311 311 7 chr2 191139253 191139558 -62117025 + L2 LINE L2 2111 2508 -806 1982 131 24 0 chr2 191139566 191139856 -62116727 - AluSx SINE Alu -15 297 1 183 288 184 18 chr2 191139898 191140061 -62116522 + L2 LINE L2 2632 2821 -493 543 265 230 0 chr2 191140137 191140333 -62116250 + MIR SINE MIR 1 241 -21 29 60 0 0 chr2 191144067 191144117 -62112466 + AT_rich Low_complexity Low_complexity 1 50 0 1777 141 7 7 chr2 191144243 191144526 -62112057 - AluSx SINE Alu -2 310 28 1567 176 134 0 chr2 191145418 191145724 -62110859 + MER7A DNA MER2_type 1 345 -1 726 294 5 31 chr2 191146285 191146479 -62110104 + MER58A DNA MER1_type 1 189 -35 551 228 76 18 chr2 191146566 191146737 -62109846 + L1MD3 LINE L1 7796 7976 -19 24 32 0 0 chr2 191146991 191147022 -62109561 + AT_rich Low_complexity Low_complexity 1 31 0 836 263 98 3 chr2 191147120 191147405 -62109178 - MER46C DNA MER2_type -14 324 13 1503 123 12 12 chr2 191147655 191147899 -62108684 + AluSx SINE Alu 1 244 -68 2159 123 0 19 chr2 191148035 191148344 -62108239 - AluSq SINE Alu -10 303 1 844 98 273 0 chr2 191148897 191149040 -62107543 - HSMAR2 DNA Mariner -319 983 802 26 30 0 0 chr2 191149453 191149486 -62107097 + AT_rich Low_complexity Low_complexity 1 33 0 5624 144 61 11 chr2 191149901 191150878 -62105705 + Tigger1 DNA MER2_type 1 1026 -1392 * 5998 105 33 78 chr2 191150876 191151761 -62104822 + Tigger1 DNA MER2_type 1383 2213 -205 1461 171 43 8 chr2 191151761 191152019 -62104564 - AluJo SINE Alu -45 267 1 5998 105 33 78 chr2 191152019 191152217 -62104366 + Tigger1 DNA MER2_type 2213 2418 0 30 0 0 0 chr2 191152723 191152753 -62103830 + AT_rich Low_complexity Low_complexity 1 30 0 27 0 0 0 chr2 191153380 191153407 -62103176 + AT_rich Low_complexity Low_complexity 1 27 0 2177 106 0 0 chr2 191154154 191154446 -62102137 - AluSx SINE Alu -19 293 2 256 361 90 75 chr2 191155388 191155643 -62100940 - L2 LINE L2 -19 3253 2995 276 91 0 0 chr2 191157308 191157352 -62099231 + (TG)n Simple_repeat Simple_repeat 2 45 0 328 343 101 14 chr2 191157611 191157830 -62098753 - L1M4 LINE L1 -3054 3092 2855 269 266 101 22 chr2 191158113 191158252 -62098331 - L1M4 LINE L1 -3569 2577 2428 472 254 0 35 chr2 191158397 191158511 -62098072 + MER5B DNA MER1_type 20 129 -49 2000 270 89 25 chr2 191158516 191158781 -62097802 - L1MEc LINE L1 -2413 3802 3556 432 0 0 0 chr2 191158781 191158829 -62097754 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 2000 270 89 25 chr2 191158829 191160257 -62096326 - L1MEc LINE L1 -2659 3556 2020 448 167 56 0 chr2 191160349 191160439 -62096144 - L1ME3 LINE L1 -20 6142 6048 425 253 109 18 chr2 191160439 191160660 -62095923 - L1MEc LINE L1 -4924 1472 1232 24 53 0 0 chr2 191161058 191161096 -62095487 + AT_rich Low_complexity Low_complexity 1 38 0 2193 105 0 0 chr2 191161748 191162043 -62094540 - AluSq SINE Alu -13 300 6 237 180 0 0 chr2 191162593 191162643 -62093940 + (TG)n Simple_repeat Simple_repeat 2 51 0 840 310 39 0 chr2 191162644 191162902 -62093681 + L2 LINE L2 2274 2541 -773 267 315 135 0 chr2 191163104 191163332 -62093251 - L1ME3 LINE L1 -536 5585 5543 2427 70 0 0 chr2 191163536 191163838 -62092745 - AluY SINE Alu -9 302 1 508 50 10 40 chr2 191164162 191164263 -62092320 + (TA)n Simple_repeat Simple_repeat 2 99 0 511 64 0 39 chr2 191165792 191165870 -62090713 - MADE1 DNA Mariner 0 80 6 22 35 0 0 chr2 191166418 191166447 -62090136 + AT_rich Low_complexity Low_complexity 1 29 0 200 240 73 10 chr2 191166809 191166905 -62089678 + (TATATG)n Simple_repeat Simple_repeat 6 107 0 308 264 54 78 chr2 191166997 191167164 -62089419 - L1MC4a LINE L1 -1941 5867 5705 1881 132 13 23 chr2 191167188 191167492 -62089091 - AluSx SINE Alu -11 301 1 270 306 63 47 chr2 191167512 191167813 -62088770 - L1MC4a LINE L1 -503 5618 5313 2057 140 0 10 chr2 191167835 191168149 -62088434 - AluSx SINE Alu -1 311 1 431 349 140 13 chr2 191169611 191169840 -62086743 - MIR SINE MIR -1 261 4 533 269 0 0 chr2 191170134 191170238 -62086345 + L2 LINE L2 3206 3309 -4 211 355 85 48 chr2 191170248 191170496 -62086087 + L2 LINE L2 2807 3063 -209 220 364 53 23 chr2 191170556 191170688 -62085895 - L2 LINE L2 -15 3257 3122 21 0 0 0 chr2 191170688 191170709 -62085874 + AT_rich Low_complexity Low_complexity 1 21 0 8255 40 0 2 chr2 191170714 191170744 -62085839 - L1P LINE L1 -2997 3149 3120 17950 33 3 0 chr2 191170744 191173689 -62082894 - L1PA3 LINE L1 -4 6151 3196 8255 40 0 2 chr2 191173689 191174697 -62081886 - L1P LINE L1 -3026 3120 2113 1500 188 86 6 chr2 191174729 191175053 -62081530 - MLT1F1 LTR MaLR -1 566 217 255 329 27 34 chr2 191175054 191175203 -62081380 - L2 LINE L2 -736 2578 2431 442 339 165 22 chr2 191175236 191175526 -62081057 - L2 LINE L2 -622 2692 2326 1513 137 31 137 chr2 191175526 191175913 -62080670 - MER7A DNA MER2_type -2 344 1 442 339 165 22 chr2 191175913 191176029 -62080554 - L2 LINE L2 -988 2326 2228 2257 82 10 7 chr2 191176133 191176436 -62080147 - AluSc SINE Alu -5 304 1 22 35 0 0 chr2 191177206 191177235 -62079348 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr2 191177311 191177339 -62079244 + AT_rich Low_complexity Low_complexity 1 28 0 1210 244 123 16 chr2 191177755 191178268 -62078315 + L1MC5 LINE L1 7330 7897 -64 219 313 0 0 chr2 191178306 191178373 -62078210 + A-rich Low_complexity Low_complexity 3 69 0 2360 92 0 0 chr2 191178584 191178889 -62077694 - AluY SINE Alu -6 305 1 604 290 51 7 chr2 191178985 191179199 -62077384 + MIR SINE MIR 44 262 0 374 143 0 0 chr2 191181086 191181142 -62075441 + Tigger4(Zombi) DNA MER2_type 1 56 -2675 * 573 111 259 0 chr2 191181138 191181246 -62075337 + Tigger4(Zombi) DNA MER2_type 2596 2731 0 1296 144 182 8 chr2 191181709 191181945 -62074638 - AluSg1 SINE Alu -30 279 3 24 0 0 0 chr2 191182860 191182884 -62073699 + AT_rich Low_complexity Low_complexity 1 24 0 180 314 65 65 chr2 191182925 191183049 -62073534 - L2 LINE L2 -11 3302 3179 441 244 25 153 chr2 191183056 191183331 -62073252 - MIR SINE MIR -3 259 20 230 257 60 112 chr2 191183494 191183743 -62072840 - L2 LINE L2 -896 2418 2183 641 228 161 33 chr2 191184759 191184970 -62071613 + MER8 DNA MER2_type 1 238 -1 206 305 68 0 chr2 191185501 191185560 -62071023 + L2 LINE L2 3203 3265 -48 238 297 291 29 chr2 191186515 191187141 -62069442 - L2 LINE L2 -706 2608 1819 497 343 41 34 chr2 191189065 191189601 -62066982 - HERVK14C LTR ERVK -315 6522 5983 275 277 53 23 chr2 191190708 191190899 -62065684 - HERVK14C LTR ERVK -2327 5090 4906 296 284 0 0 chr2 191191280 191191368 -62065215 - HERVK14C LTR ERVK -3003 4749 4662 35132 91 12 10 chr2 191193834 191197651 -62058932 - L1PA6 LINE L1 0 6154 2324 279 0 0 0 chr2 191197651 191197682 -62058901 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 35132 91 12 10 chr2 191197682 191200001 -62056582 - L1PA6 LINE L1 -3830 2324 11 1932 162 71 44 chr2 191200659 191201154 -62055429 + L1MB8 LINE L1 5671 6178 0 686 220 37 64 chr2 191202296 191202514 -62054069 - MER58C DNA MER1_type -1 214 3 749 189 0 8 chr2 191204471 191204598 -62051985 + FLAM_A SINE Alu 1 126 -7 2318 169 31 5 chr2 191205174 191205589 -62050994 + MSTB LTR MaLR 1 426 0 9828 80 49 4 chr2 191205979 191208183 -62048400 - L1PA7 LINE L1 -1 6153 3880 1924 152 13 0 chr2 191209055 191209358 -62047225 + AluSx SINE Alu 1 307 -5 195 368 46 0 chr2 191209419 191209506 -62047077 + L2 LINE L2 3154 3244 -28 355 301 57 31 chr2 191210596 191210789 -62045794 + L1MC5 LINE L1 7408 7605 -356 1637 167 33 39 chr2 191211785 191212145 -62044438 + MLT1A1 LTR MaLR 1 358 -7 1902 146 0 3 chr2 191212647 191212941 -62043642 + AluJb SINE Alu 1 293 -19 3236 174 72 8 chr2 191213911 191214237 -62042346 - L1MB2 LINE L1 0 6171 5867 2125 119 3 0 chr2 191214237 191214530 -62042053 - AluSx SINE Alu -18 294 1 3236 174 72 8 chr2 191214530 191214915 -62041668 - L1MB2 LINE L1 -304 5867 5415 2243 109 0 10 chr2 191215513 191215816 -62040767 + AluSq SINE Alu 1 300 -13 1089 250 68 59 chr2 191217796 191218371 -62038212 - L2 LINE L2 -6 3307 2757 673 227 137 56 chr2 191218401 191218751 -62037832 - MER57A LTR ERV1 0 403 49 380 249 278 24 chr2 191218800 191218824 -62037759 + HAL1 LINE L1 1436 1453 -1054 410 0 0 20 chr2 191218824 191218875 -62037708 + (CA)n Simple_repeat Simple_repeat 2 51 0 380 249 278 24 chr2 191218875 191219231 -62037352 + HAL1 LINE L1 1453 1913 -594 316 229 128 0 chr2 191219751 191219860 -62036723 - Charlie8 DNA MER1_type -2289 128 6 2930 261 121 46 chr2 191220286 191221196 -62035387 + L1MC4a LINE L1 5589 6430 -1378 828 213 66 10 chr2 191221196 191221393 -62035190 - MER63A DNA MER1_type -2 208 1 2930 261 121 46 chr2 191221393 191222226 -62034357 + L1MC4a LINE L1 6430 7462 -346 1870 227 102 49 chr2 191222235 191222419 -62034164 + L1ME1 LINE L1 5325 5498 -668 2424 101 0 0 chr2 191222419 191222726 -62033857 + AluSq SINE Alu 1 307 -6 1870 227 102 49 chr2 191222726 191223001 -62033582 + L1ME1 LINE L1 5498 5757 -409 1783 194 0 16 chr2 191223001 191223310 -62033273 + AluJo SINE Alu 1 304 -8 1870 227 102 49 chr2 191223310 191223598 -62032985 + L1ME1 LINE L1 5757 6112 -54 470 259 13 6 chr2 191223496 191223654 -62032929 + L1MA10 LINE L1 6169 6327 -7 * 1473 192 34 3 chr2 191223774 191224071 -62032512 + MER2 DNA MER2_type 40 345 0 559 225 19 108 chr2 191224131 191224438 -62032145 + L1MC4 LINE L1 7698 7977 -65 730 265 53 26 chr2 191225545 191225647 -62030936 + MIR SINE MIR 45 156 -106 1691 132 96 12 chr2 191225647 191225980 -62030603 - MER46B DNA MER2_type 0 236 1 730 265 53 26 chr2 191225980 191226066 -62030517 + MIR SINE MIR 156 238 -24 274 205 252 64 chr2 191227137 191227371 -62029212 - L2 LINE L2 -4 3309 3032 292 235 31 112 chr2 191228351 191228495 -62028088 - L1MC5 LINE L1 -50 7911 7786 2314 120 0 0 chr2 191228495 191228804 -62027779 - AluSg SINE Alu -1 309 1 292 235 31 112 chr2 191228804 191228855 -62027728 - L1MC5 LINE L1 -175 7786 7732 2832 213 22 11 chr2 191228855 191229476 -62027107 + MER82 DNA MER2_type 1 628 -25 2070 123 33 3 chr2 191229609 191229942 -62026641 - L1PA16 LINE L1 -8 6158 5816 961 227 7 9 chr2 191230102 191230402 -62026181 + MER2 DNA MER2_type 7 344 -1 429 293 166 12 chr2 191232377 191232630 -62023953 + L2 LINE L2 1864 2155 -1159 1211 312 53 30 chr2 191232633 191233288 -62023295 + L2 LINE L2 2361 3033 -280 2070 145 0 0 chr2 191233630 191233927 -62022656 - AluSg SINE Alu -13 297 1 269 301 41 89 chr2 191234223 191234369 -62022214 + L2 LINE L2 3134 3272 0 218 70 18 70 chr2 191234412 191234469 -62022114 + (GAAA)n Simple_repeat Simple_repeat 4 57 0 2226 116 0 3 chr2 191236471 191236764 -62019819 - AluSq SINE Alu -21 292 1 1449 190 71 4 chr2 191236963 191237231 -62019352 - AluJo SINE Alu -26 286 1 705 172 70 6 chr2 191237594 191237751 -62018832 + MER5A DNA MER1_type 1 167 -22 353 288 119 25 chr2 191237775 191237935 -62018648 - MER5B DNA MER1_type -3 175 1 22 0 0 0 chr2 191240667 191240689 -62015894 + AT_rich Low_complexity Low_complexity 1 22 0 216 196 39 20 chr2 191240821 191240872 -62015711 - MIR SINE MIR -92 170 119 1685 161 43 10 chr2 191241151 191241450 -62015133 - AluJb SINE Alu -2 310 2 1867 132 7 26 chr2 191244523 191244826 -62011757 - AluSx SINE Alu -15 297 1 1402 186 99 4 chr2 191245339 191245484 -62011099 - AluJb SINE Alu -24 288 158 203 0 37 0 chr2 191245484 191245511 -62011072 + (TTTTG)n Simple_repeat Simple_repeat 5 32 0 1402 186 99 4 chr2 191245511 191245628 -62010955 - AluJb SINE Alu -154 158 1 3261 106 130 94 chr2 191245885 191245955 -62010628 - LTR8 LTR ERV1 0 691 625 2272 109 0 13 chr2 191245955 191246268 -62010315 + AluSc SINE Alu 1 309 0 3261 106 130 94 chr2 191246268 191246864 -62009719 - LTR8 LTR ERV1 -66 625 1 1174 329 86 21 chr2 191248368 191249166 -62007417 + L2 LINE L2 2211 3055 -217 453 204 5 147 chr2 191249169 191249374 -62007209 - MER69A DNA AcHobo -1 176 1 367 43 0 0 chr2 191249442 191249488 -62007095 - MADE1 DNA Mariner -34 46 1 1821 153 0 0 chr2 191250569 191250837 -62005746 + AluSx SINE Alu 39 306 -6 1099 224 5 14 chr2 191252337 191252560 -62004023 + MER58A DNA MER1_type 1 221 -3 529 115 52 10 chr2 191253133 191253229 -62003354 + HY3 scRNA scRNA 1 100 -1 26 0 0 0 chr2 191253229 191253255 -62003328 + AT_rich Low_complexity Low_complexity 1 26 0 201 371 0 0 chr2 191253729 191253799 -62002784 - MIR SINE MIR -115 93 24 211 216 0 0 chr2 191254183 191254234 -62002349 + T-rich Low_complexity Low_complexity 1 51 0 28 0 0 0 chr2 191255645 191255673 -62000910 + AT_rich Low_complexity Low_complexity 1 28 0 182 373 0 30 chr2 191255767 191255834 -62000749 + MIR SINE MIR 13 77 -185 25 31 0 0 chr2 191256504 191256536 -62000047 + AT_rich Low_complexity Low_complexity 1 32 0 902 210 73 26 chr2 191257601 191257873 -61998710 - MER65B LTR ERV1 -16 515 231 389 186 35 12 chr2 191257918 191258004 -61998579 - MER65C LTR ERV1 -373 88 1 833 177 7 7 chr2 191258021 191258168 -61998415 - FRAM SINE Alu -30 146 1 486 150 12 0 chr2 191258427 191258507 -61998076 - Tigger5 DNA MER2_type 0 2323 2243 254 164 73 18 chr2 191258507 191258562 -61998021 - Tigger5 DNA MER2_type -23 2300 2243 237 289 0 0 chr2 191258543 191258595 -61997988 - Tigger5 DNA MER2_type -2270 53 2 * 205 186 0 0 chr2 191258830 191258873 -61997710 + A-rich Low_complexity Low_complexity 6 48 0 201 121 30 0 chr2 191260502 191260535 -61996048 - L2 LINE L2 -73 3240 3207 582 241 171 6 chr2 191260691 191260849 -61995734 - MER5A DNA MER1_type -2 187 4 456 287 121 17 chr2 191260857 191261031 -61995552 + MIR SINE MIR 27 218 -44 241 167 0 0 chr2 191262466 191262502 -61994081 + MLT1J LTR MaLR 100 135 -376 436 221 99 93 chr2 191262533 191262705 -61993878 + MLT1J LTR MaLR 231 403 -108 22 0 0 0 chr2 191265929 191265951 -61990632 + AT_rich Low_complexity Low_complexity 1 22 0 248 265 44 0 chr2 191266801 191266869 -61989714 + MIR SINE MIR 160 230 -32 241 180 20 0 chr2 191268244 191268294 -61988289 - MADE1 DNA Mariner 0 80 30 1736 159 3 42 chr2 191268648 191268956 -61987627 + AluJb SINE Alu 1 296 -16 26 0 0 0 chr2 191269923 191269949 -61986634 + AT_rich Low_complexity Low_complexity 1 26 0 29 28 0 0 chr2 191271706 191271742 -61984841 + AT_rich Low_complexity Low_complexity 1 36 0 201 345 0 0 chr2 191271764 191271819 -61984764 + L2 LINE L2 2256 2310 -1004 340 256 58 0 chr2 191272024 191272110 -61984473 - L2 LINE L2 0 3272 3182 353 274 84 45 chr2 191272343 191272522 -61984061 - L2 LINE L2 -1221 2093 1908 759 338 159 34 chr2 191272528 191273341 -61983242 - L2 LINE L2 -1747 1567 654 204 40 0 0 chr2 191273625 191273650 -61982933 + (CAA)n Simple_repeat Simple_repeat 2 26 0 841 247 77 47 chr2 191273711 191273955 -61982628 + L1ME2 LINE L1 5778 6013 -321 2385 43 3 3 chr2 191273955 191274265 -61982318 + AluY SINE Alu 1 310 0 841 247 77 47 chr2 191274265 191274398 -61982185 + L1ME2 LINE L1 6013 6334 0 5413 145 35 25 chr2 191275087 191276204 -61980379 - L1MA4 LINE L1 -5 6295 5157 2323 112 0 0 chr2 191276358 191276670 -61979913 + AluSx SINE Alu 1 312 0 21 0 0 0 chr2 191277621 191277642 -61978941 + AT_rich Low_complexity Low_complexity 1 21 0 440 228 153 21 chr2 191278860 191279049 -61977534 + L1ME3 LINE L1 5704 5917 -245 753 181 0 8 chr2 191280218 191280345 -61976238 + FLAM_A SINE Alu 1 126 -7 2310 169 31 5 chr2 191280921 191281336 -61975247 + MSTB LTR MaLR 1 426 0 36925 89 15 12 chr2 191281727 191285539 -61971044 - L1PA7 LINE L1 0 6154 2318 261 0 0 0 chr2 191285539 191285568 -61971015 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 36925 89 15 12 chr2 191285568 191287884 -61968699 - L1PA7 LINE L1 -3836 2318 11 2081 162 71 44 chr2 191288541 191289036 -61967547 + L1MB8 LINE L1 5671 6178 0 695 220 37 64 chr2 191290178 191290396 -61966187 - MER58C DNA MER1_type -1 214 3 1508 163 58 12 chr2 191291298 191291642 -61964941 + L1P LINE L1 3544 3903 -2243 2813 238 88 48 chr2 191292264 191293523 -61963060 + L1ME1 LINE L1 789 2044 -4362 3021 232 77 17 chr2 191293577 191294523 -61962060 + L1ME1 LINE L1 2339 3331 -3075 1991 140 14 0 chr2 191294523 191294816 -61961767 + AluSx SINE Alu 1 297 -15 3021 232 77 17 chr2 191294816 191294964 -61961619 + L1ME1 LINE L1 3331 3469 -2937 * 3024 225 84 21 chr2 191294962 191295771 -61960812 + L1ME1 LINE L1 5515 6374 -52 28 0 0 0 chr2 191295812 191295840 -61960743 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr2 191296252 191296281 -61960302 + AT_rich Low_complexity Low_complexity 1 29 0 368 351 54 39 chr2 191297565 191297771 -61958812 - L2 LINE L2 -644 2670 2456 2127 114 14 0 chr2 191297771 191298068 -61958515 + AluSx SINE Alu 1 301 -11 368 351 54 39 chr2 191298068 191298197 -61958386 - L2 LINE L2 -858 2456 2330 365 224 51 20 chr2 191298457 191298555 -61958028 + MIR SINE MIR 53 153 -109 1116 169 3 2 chr2 191348810 191350042 -61906541 + ALR/Alpha Satellite centromeric 1 1232 -35 2304 74 3 0 chr2 191350403 191350688 -61905895 + AluY SINE Alu 1 286 -25 291 372 28 35 chr2 191350704 191350849 -61905734 + MIR3 SINE MIR 17 160 -48 389 274 46 73 chr2 191350849 191351108 -61905475 - MER112 DNA MER1_type 0 256 5 356 183 0 0 chr2 191352039 191352110 -61904473 + AluS SINE Alu 228 298 -2 340 261 101 34 chr2 191352422 191352541 -61904042 + MIR SINE MIR 136 262 0 21 36 0 0 chr2 191352566 191352594 -61903989 + AT_rich Low_complexity Low_complexity 1 28 0 320 353 59 7 chr2 191353447 191353583 -61903000 + MIR3 SINE MIR 4 146 -62 343 260 10 48 chr2 191353619 191353723 -61902860 + MER94 DNA DNA 4 103 -31 1022 136 7 13 chr2 191354167 191354321 -61902262 - AluSx SINE Alu -159 153 1 366 230 115 18 chr2 191354949 191355062 -61901521 + L2 LINE L2 2571 2694 -620 2286 93 3 6 chr2 191355065 191355376 -61901207 - AluSp SINE Alu -3 310 1 399 202 81 10 chr2 191355429 191355528 -61901055 + L1MC4a LINE L1 7703 7808 0 552 306 45 38 chr2 191355540 191355802 -61900781 + L2 LINE L2 2743 3006 -307 1871 118 4 7 chr2 191356240 191356510 -61900073 + AluSq SINE Alu 1 269 -44 282 173 25 25 chr2 191356514 191356595 -61899988 + GA-rich Low_complexity Low_complexity 1 81 0 301 238 24 24 chr2 191356815 191356979 -61899604 + CT-rich Low_complexity Low_complexity 3 166 0 * 311 211 0 0 chr2 191356961 191357032 -61899551 + T-rich Low_complexity Low_complexity 1 71 0 273 118 0 0 chr2 191357048 191357099 -61899484 + (CAAG)n Simple_repeat Simple_repeat 2 52 0 187 252 50 109 chr2 191357146 191357206 -61899377 - MIR SINE MIR -48 214 163 730 158 36 0 chr2 191357206 191357345 -61899238 - L1MB3 LINE L1 -1 6182 6039 187 252 50 109 chr2 191357345 191357403 -61899180 - MIR SINE MIR -99 163 103 970 256 163 25 chr2 191357710 191358152 -61898431 + MLT1H LTR MaLR 47 549 0 21 0 0 0 chr2 191358471 191358492 -61898091 + AT_rich Low_complexity Low_complexity 1 21 0 1739 216 123 14 chr2 191358884 191359379 -61897204 - L1MB7 LINE L1 -11 6173 5625 301 297 93 8 chr2 191359461 191359579 -61897004 - L2 LINE L2 -2 3270 3143 581 264 256 21 chr2 191360263 191360372 -61896211 + L2 LINE L2 888 970 -2344 1863 107 34 40 chr2 191360372 191360670 -61895913 - AluSx SINE Alu -14 298 3 581 264 256 21 chr2 191360670 191360943 -61895640 + L2 LINE L2 970 1360 -1954 2083 248 62 31 chr2 191360954 191361981 -61894602 + L2 LINE L2 2249 3313 0 269 284 64 64 chr2 191362019 191362160 -61894423 - L2 LINE L2 -199 3073 2933 235 333 31 0 chr2 191363149 191363245 -61893338 + HAL1 LINE L1 1824 1922 -585 22 0 0 0 chr2 191363480 191363502 -61893081 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr2 191363625 191363660 -61892923 + AT_rich Low_complexity Low_complexity 1 35 0 269 200 55 100 chr2 191363684 191363794 -61892789 + HAL1b LINE L1 806 910 -438 366 272 124 87 chr2 191364375 191364754 -61891829 - L1M2 LINE L1 -5586 1263 485 22 0 0 0 chr2 191364783 191364805 -61891778 + AT_rich Low_complexity Low_complexity 1 22 0 1958 100 32 18 chr2 191366277 191366580 -61890003 - AluSq SINE Alu 0 307 1 213 340 104 0 chr2 191366724 191366830 -61889753 - L2 LINE L2 -760 2554 2438 1004 185 157 4 chr2 191366960 191367241 -61889342 + MER33 DNA MER1_type 1 324 0 185 225 25 0 chr2 191367259 191367299 -61889284 - L2 LINE L2 -1082 2232 2192 279 240 50 70 chr2 191367458 191367535 -61889048 + L1MC5 LINE L1 6784 6861 -1181 12974 36 6 1 chr2 191367535 191369893 -61886690 + L1PA4 LINE L1 3801 6169 0 279 240 50 70 chr2 191369893 191369998 -61886585 + L1MC5 LINE L1 6861 7039 -1003 311 241 157 0 chr2 191371632 191371715 -61884868 - L2 LINE L2 -623 2691 2596 333 274 0 78 chr2 191371970 191372072 -61884511 + LTR16A LTR ERVL 357 450 0 25 65 0 0 chr2 191372172 191372218 -61884365 + AT_rich Low_complexity Low_complexity 1 46 0 30 59 0 0 chr2 191373116 191373167 -61883416 + AT_rich Low_complexity Low_complexity 1 51 0 888 114 0 30 chr2 191373245 191373376 -61883207 + AluJb SINE Alu 1 127 -185 382 132 8 163 chr2 191373395 191373460 -61883123 - MER104 DNA Tc2 -1765 133 96 735 219 12 18 chr2 191373460 191373624 -61882959 - FRAM SINE Alu -3 163 1 382 132 8 163 chr2 191373624 191373687 -61882896 - MER104 DNA Tc2 -1802 96 25 2105 106 10 3 chr2 191374429 191374722 -61881861 - AluSx SINE Alu -17 295 1 219 333 192 25 chr2 191376177 191376453 -61880130 - L2 LINE L2 -425 2889 2568 1834 228 24 24 chr2 191376527 191376978 -61879605 + LTR40c LTR ERVL 1 451 -14 1635 161 90 5 chr2 191377281 191377648 -61878935 + L1 LINE L1 2674 3071 -3075 10486 158 61 42 chr2 191377663 191379249 -61877334 + L1MA4 LINE L1 2851 4535 -1765 2791 3 0 0 chr2 191379249 191379553 -61877030 + AluYa5 SINE Alu 1 304 -7 10486 158 61 42 chr2 191379553 191380861 -61875722 + L1MA4 LINE L1 4535 5816 -484 2555 157 40 8 chr2 191381001 191381497 -61875086 + L1MA4 LINE L1 5783 6294 -6 22 0 0 0 chr2 191381497 191381519 -61875064 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr2 191382572 191382594 -61873989 + (A)n Simple_repeat Simple_repeat 1 22 0 2156 189 35 22 chr2 191382655 191383116 -61873467 + MLT1C LTR MaLR 1 467 0 28 48 0 0 chr2 191383885 191383927 -61872656 + AT_rich Low_complexity Low_complexity 1 42 0 1437 193 39 32 chr2 191383937 191384222 -61872361 + AluJo SINE Alu 1 287 -25 24 32 0 0 chr2 191384223 191384254 -61872329 + AT_rich Low_complexity Low_complexity 1 31 0 849 228 69 10 chr2 191384673 191384875 -61871708 + MER58A DNA MER1_type 9 222 -2 28 29 0 0 chr2 191384968 191385003 -61871580 + AT_rich Low_complexity Low_complexity 1 35 0 2771 148 33 26 chr2 191385351 191385519 -61871064 + L1MB2 LINE L1 5627 5792 -379 2063 133 0 3 chr2 191385519 191385820 -61870763 + AluSx SINE Alu 1 300 -12 2771 148 33 26 chr2 191385820 191386191 -61870392 + L1MB2 LINE L1 5792 6170 -1 292 294 109 80 chr2 191386605 191386843 -61869740 + MIR SINE MIR 6 250 -12 932 268 49 78 chr2 191387245 191387720 -61868863 + L1ME1 LINE L1 5706 6162 -4 412 111 28 0 chr2 191387870 191387942 -61868641 + L1MB4 LINE L1 6105 6178 -2 317 322 123 29 chr2 191388053 191388224 -61868359 + MIR SINE MIR 14 200 -62 28 71 0 0 chr2 191388858 191388914 -61867669 + AT_rich Low_complexity Low_complexity 1 56 0 377 333 15 25 chr2 191389083 191389281 -61867302 + L2 LINE L2 2549 2744 -570 200 94 31 0 chr2 191389860 191389892 -61866691 + GA-rich Low_complexity Low_complexity 1 33 0 2196 125 0 0 chr2 191389939 191390243 -61866340 + AluSx SINE Alu 1 304 -8 2076 184 55 8 chr2 191390698 191391095 -61865488 + MER47B DNA MER2_type 2 417 -1 2026 126 10 3 chr2 191392065 191392358 -61864225 + AluSx SINE Alu 3 297 -15 252 0 0 0 chr2 191392736 191392764 -61863819 + (TG)n Simple_repeat Simple_repeat 2 29 0 194 291 165 0 chr2 191392868 191392947 -61863636 + MIR SINE MIR 81 172 -90 188 205 72 145 chr2 191393082 191393165 -61863418 + MIR SINE MIR 160 236 -26 2090 108 10 3 chr2 191393834 191394131 -61862452 + AluSx SINE Alu 2 300 -12 27 62 0 0 chr2 191395086 191395134 -61861449 + AT_rich Low_complexity Low_complexity 1 48 0 2284 106 0 3 chr2 191395272 191395575 -61861008 + AluSx SINE Alu 1 302 -10 489 282 37 58 chr2 191396195 191396385 -61860198 + L1ME3 LINE L1 5978 6164 -5 237 350 33 17 chr2 191396395 191396515 -61860068 + MER5A DNA MER1_type 61 182 -7 26 30 0 0 chr2 191397759 191397792 -61858791 + AT_rich Low_complexity Low_complexity 1 33 0 835 162 47 7 chr2 191397878 191398026 -61858557 + AluSg/x SINE Alu 135 288 -22 2010 95 38 0 chr2 191398046 191398308 -61858275 + AluSg SINE Alu 15 286 -24 199 114 45 0 chr2 191398308 191398352 -61858231 + (TA)n Simple_repeat Simple_repeat 1 46 0 684 207 0 15 chr2 191398515 191398650 -61857933 - FLAM_C SINE Alu 0 133 1 208 283 0 33 chr2 191398911 191398971 -61857612 - L2 LINE L2 -2 3270 3213 1963 148 3 7 chr2 191399588 191399893 -61856690 + AluSx SINE Alu 1 304 -8 963 210 23 0 chr2 191400290 191400466 -61856117 - MER5A DNA MER1_type 0 189 10 255 183 0 14 chr2 191400947 191401018 -61855565 + HAL1b LINE L1 748 817 -531 606 177 123 85 chr2 191401081 191401341 -61855242 + MER5C DNA MER1_type 55 324 0 1073 155 24 0 chr2 191401361 191401529 -61855054 + MER2 DNA MER2_type 1 172 -173 2175 111 63 0 chr2 191401839 191402171 -61854412 + L1PA15 LINE L1 5792 6144 -21 380 276 151 62 chr2 191402569 191402668 -61853915 + MIR SINE MIR 25 114 -148 2199 119 0 3 chr2 191402668 191402979 -61853604 + AluSx SINE Alu 1 310 -2 380 276 151 62 chr2 191402979 191403071 -61853512 + MIR SINE MIR 114 233 -29 579 325 49 12 chr2 191404889 191405135 -61851448 + MIR SINE MIR 3 257 -5 737 164 0 37 chr2 191405368 191405502 -61851081 + FLAM_C SINE Alu 5 133 0 27 29 0 0 chr2 191406159 191406193 -61850390 + AT_rich Low_complexity Low_complexity 1 34 0 564 240 34 34 chr2 191406348 191406523 -61850060 + MIR SINE MIR 75 249 -13 2272 72 13 23 chr2 191406623 191406928 -61849655 + AluSq SINE Alu 1 302 -11 1491 197 14 10 chr2 191407337 191407632 -61848951 + AluJb SINE Alu 7 302 -10 220 257 110 37 chr2 191407719 191407828 -61848755 - MIR SINE MIR -83 179 63 708 192 0 23 chr2 191407988 191408118 -61848465 - FLAM_A SINE Alu -6 127 1 192 250 0 0 chr2 191409375 191409411 -61847172 - L2 LINE L2 -12 3301 3266 258 265 20 20 chr2 191409429 191409531 -61847052 - MIR SINE MIR 0 262 161 220 357 0 31 chr2 191409854 191409952 -61846631 - MER5B DNA MER1_type -83 95 1 * 249 357 80 0 chr2 191409952 191410061 -61846522 - MIR SINE MIR -58 150 33 1419 163 68 34 chr2 191410173 191410467 -61846116 - MER7A DNA MER2_type -44 302 1 402 169 0 14 chr2 191410485 191410556 -61846027 - Tigger5 DNA MER2_type 0 2323 2254 1336 199 4 15 chr2 191410556 191410828 -61845755 + AluJb SINE Alu 1 269 -43 250 266 11 58 chr2 191410923 191411111 -61845472 + C-rich Low_complexity Low_complexity 2 180 0 * 275 294 31 6 chr2 191410978 191411141 -61845442 + (CACCC)n Simple_repeat Simple_repeat 5 171 0 2456 58 3 0 chr2 191411364 191411658 -61844925 - AluY SINE Alu -16 295 1 295 359 6 31 chr2 191411660 191411819 -61844764 + MER5A DNA MER1_type 13 167 -22 25 31 0 0 chr2 191411833 191411865 -61844718 + AT_rich Low_complexity Low_complexity 1 32 0 2215 243 42 10 chr2 191411875 191412545 -61844038 - L1 LINE L1 -2719 3427 2737 4760 185 59 51 chr2 191412546 191413450 -61843133 + L1 LINE L1 3433 4351 -1795 2090 119 7 23 chr2 191413450 191413760 -61842823 + AluSx SINE Alu 1 305 -7 4760 185 59 51 chr2 191413760 191414100 -61842483 + L1 LINE L1 4351 4687 -1459 2118 120 25 18 chr2 191414070 191414509 -61842074 + L1PA16 LINE L1 5149 5597 -569 * 1597 162 35 0 chr2 191414609 191414899 -61841684 + L1PA16 LINE L1 5845 6144 -22 1865 149 7 7 chr2 191415565 191415861 -61840722 + AluSx SINE Alu 1 296 -16 310 355 53 42 chr2 191415902 191416091 -61840492 + MIR3 SINE MIR 18 208 0 584 249 57 23 chr2 191416238 191416415 -61840168 - MIR SINE MIR -31 231 49 22 0 0 0 chr2 191417960 191417982 -61838601 + AT_rich Low_complexity Low_complexity 1 22 0 420 279 163 7 chr2 191418846 191418993 -61837590 + MER5A DNA MER1_type 14 183 -6 2200 96 3 3 chr2 191419371 191419663 -61836920 + AluSx SINE Alu 16 307 -5 3450 123 17 13 chr2 191420452 191420974 -61835609 - MER1A DNA MER1_type 0 527 4 566 256 102 56 chr2 191421178 191421273 -61835310 - MIR SINE MIR -31 231 142 2253 93 10 0 chr2 191421273 191421574 -61835009 + AluSx SINE Alu 1 304 -8 566 256 102 56 chr2 191421574 191421693 -61834890 - MIR SINE MIR -120 142 7 232 240 0 0 chr2 191422091 191422141 -61834442 - L2 LINE L2 -1 3271 3222 189 139 0 0 chr2 191423363 191423406 -61833177 + (A)n Simple_repeat Simple_repeat 1 43 0 1989 150 0 6 chr2 191423486 191423800 -61832783 + AluJo SINE Alu 1 312 0 3021 136 29 29 chr2 191424398 191424627 -61831956 + L1MB8 LINE L1 5598 5826 -352 1500 203 0 42 chr2 191424627 191424933 -61831650 + AluJo SINE Alu 5 297 -15 3021 136 29 29 chr2 191424933 191425284 -61831299 + L1MB8 LINE L1 5825 6178 0 840 169 0 0 chr2 191425810 191425934 -61830649 + FLAM_C SINE Alu 1 124 -19 758 101 0 0 chr2 191426167 191426276 -61830307 - HY1 scRNA scRNA -2 110 2 551 164 118 0 chr2 191429467 191429577 -61827006 + FLAM_C SINE Alu 3 125 -18 655 216 86 25 chr2 191429638 191429800 -61826783 + FAM SINE Alu 4 175 0 775 284 44 24 chr2 191429912 191430162 -61826421 + MIR SINE MIR 2 256 -6 220 253 0 25 chr2 191430168 191430247 -61826336 + (TAA)n Simple_repeat Simple_repeat 1 77 0 579 325 49 12 chr2 191430403 191430649 -61825934 + MIR SINE MIR 3 257 -5 737 164 0 37 chr2 191430882 191431016 -61825567 + FLAM_C SINE Alu 5 133 0 562 244 36 30 chr2 191431869 191432037 -61824546 + MIR SINE MIR 81 249 -13 2266 72 13 26 chr2 191432137 191432443 -61824140 + AluSq SINE Alu 1 302 -11 1434 201 20 10 chr2 191432852 191433145 -61823438 + AluJb SINE Alu 7 302 -10 220 257 110 37 chr2 191433232 191433341 -61823242 - MIR SINE MIR -83 179 63 708 192 0 23 chr2 191433501 191433631 -61822952 - FLAM_A SINE Alu -6 127 1 192 250 0 0 chr2 191434888 191434924 -61821659 - L2 LINE L2 -12 3301 3266 258 265 20 20 chr2 191434942 191435044 -61821539 - MIR SINE MIR 0 262 161 220 357 0 31 chr2 191435367 191435465 -61821118 - MER5B DNA MER1_type -83 95 1 * 249 357 80 0 chr2 191435465 191435574 -61821009 - MIR SINE MIR -58 150 33 1434 160 68 34 chr2 191435686 191435980 -61820603 - MER7A DNA MER2_type -44 302 1 1100 126 84 5 chr2 191435998 191436069 -61820514 - MER47B DNA MER2_type -1905 418 354 1766 167 7 10 chr2 191436069 191436369 -61820214 + AluJb SINE Alu 1 299 -13 1100 126 84 5 chr2 191436369 191436487 -61820096 - MER47B DNA MER2_type -1969 354 214 355 229 12 12 chr2 191436510 191436593 -61819990 - MER47B DNA MER2_type -335 83 1 24 0 0 0 chr2 191437300 191437324 -61819259 + AT_rich Low_complexity Low_complexity 1 24 0 588 303 22 27 chr2 191438113 191438298 -61818285 - MIR3 SINE MIR -2 206 23 421 297 119 88 chr2 191441067 191441719 -61814864 + L1M2 LINE L1 295 978 -5871 225 0 0 0 chr2 191441719 191441744 -61814839 + (CGG)n Simple_repeat Simple_repeat 2 26 0 421 297 119 88 chr2 191441744 191441905 -61814678 + L1M2 LINE L1 978 1133 -5716 25 31 0 0 chr2 191442636 191442668 -61813915 + AT_rich Low_complexity Low_complexity 1 32 0 447 141 0 0 chr2 191443653 191443724 -61812859 - FLAM SINE Alu -10 133 63 1658 171 11 4 chr2 191443728 191444009 -61812574 + AluJo SINE Alu 17 299 -13 563 176 7 26 chr2 191444018 191444171 -61812412 + GA-rich Low_complexity Low_complexity 4 153 0 2313 103 3 6 chr2 191444182 191444494 -61812089 + AluSx SINE Alu 1 311 -1 447 283 91 30 chr2 191444649 191444847 -61811736 + MLT1J LTR MaLR 292 501 -10 517 295 76 24 chr2 191444962 191445172 -61811411 - MIR SINE MIR -32 230 10 268 187 77 44 chr2 191445241 191445332 -61811251 + LTR33 LTR ERVL 415 508 -13 253 310 70 10 chr2 191446784 191446884 -61809699 - L2 LINE L2 -1024 2290 2185 656 83 49 28 chr2 191446928 191447072 -61809511 + GA-rich Low_complexity Low_complexity 4 150 0 2398 101 169 5 chr2 191447081 191447171 -61809412 + LTR7 LTR ERV1 1 75 -375 2539 78 0 0 chr2 191447171 191447480 -61809103 + AluSp SINE Alu 1 309 -4 2398 101 169 5 chr2 191447480 191447774 -61808809 + LTR7 LTR ERV1 75 448 -2 7452 234 84 81 chr2 191447776 191451296 -61805287 + HERVH LTR ERV1 1 3736 -3977 7158 107 3 5 chr2 191451290 191452319 -61804264 + HERVH LTR ERV1 3995 4992 -2721 * 3107 64 7 12 chr2 191452298 191452718 -61803865 + HERVH LTR ERV1 7296 7713 0 * 2534 75 201 3 chr2 191452718 191453092 -61803491 + LTR7 LTR ERV1 1 448 -2 848 286 140 29 chr2 191453095 191453539 -61803044 - L2 LINE L2 -1257 2057 1565 339 282 10 10 chr2 191453610 191453713 -61802870 - MIR SINE MIR -1 261 159 3664 124 10 4 chr2 191453713 191454221 -61802362 - MER9 LTR ERVK 0 511 1 2209 123 16 3 chr2 191454221 191454555 -61802028 - HERVK9 LTR ERVK 0 5916 4922 5584 98 4 4 chr2 191454586 191455335 -61801248 - HERVK9 LTR ERVK -275 5641 4893 6449 67 1 0 chr2 191455335 191456124 -61800459 - HERVK9 LTR ERVK -3703 2213 1424 4062 89 12 21 chr2 191456122 191456695 -61799888 - HERVK9 LTR ERVK -5348 568 1 * 3863 119 0 4 chr2 191456695 191457208 -61799375 - MER9 LTR ERVK 0 511 1 213 292 58 51 chr2 191457289 191457426 -61799157 - L2 LINE L2 -1835 1479 1342 623 245 55 15 chr2 191457452 191457633 -61798950 + MIR SINE MIR 8 192 -62 282 281 144 20 chr2 191457727 191457873 -61798710 - L2 LINE L2 -2106 1208 1045 21 36 0 0 chr2 191458080 191458108 -61798475 + AT_rich Low_complexity Low_complexity 1 28 0 814 165 0 8 chr2 191458246 191458373 -61798210 + FLAM_C SINE Alu 2 127 -16 22 0 0 0 chr2 191458378 191458400 -61798183 + AT_rich Low_complexity Low_complexity 1 22 0 1859 168 0 19 chr2 191458402 191458711 -61797872 + AluJb SINE Alu 1 303 -9 2381 84 7 10 chr2 191459544 191459852 -61796731 - AluSc SINE Alu -2 307 1 2132 113 3 0 chr2 191460116 191460416 -61796167 + AluSx SINE Alu 2 302 -10 186 43 0 0 chr2 191461339 191461362 -61795221 + (CCA)n Simple_repeat Simple_repeat 1 23 0 1718 145 18 7 chr2 191461611 191461929 -61794654 - AluSx SINE Alu 0 323 3 1122 48 0 0 chr2 191461949 191462075 -61794508 + AluY SINE Alu 100 225 -86 262 200 44 33 chr2 191462101 191462191 -61794392 - L1MC5 LINE L1 -35 7926 7836 1090 191 0 43 chr2 191462300 191462477 -61794106 - AluJo SINE Alu -3 309 143 2252 80 0 45 chr2 191462477 191462788 -61793795 - AluSg SINE Alu -13 297 1 1090 191 0 43 chr2 191462788 191462845 -61793738 - AluJo SINE Alu -169 143 85 477 197 0 0 chr2 191462865 191462941 -61793642 - FRAM SINE Alu -82 94 19 584 260 64 20 chr2 191464295 191464499 -61792084 + LTR7 LTR ERV1 238 450 0 2168 103 0 3 chr2 191464712 191465038 -61791545 + AluSc SINE Alu 1 325 0 2201 108 3 13 chr2 191465521 191465835 -61790748 - AluSx SINE Alu -1 311 1 280 255 61 10 chr2 191465954 191466035 -61790548 - MIR3 SINE MIR -1 207 119 1637 185 13 26 chr2 191466035 191466348 -61790235 + AluJo SINE Alu 1 309 -3 280 255 61 10 chr2 191466348 191466364 -61790219 - MIR3 SINE MIR -89 119 105 538 138 18 18 chr2 191467154 191467263 -61789320 + CT-rich Low_complexity Low_complexity 2 110 0 2243 81 23 16 chr2 191467271 191467579 -61789004 - AluY SINE Alu -1 310 1 433 230 99 33 chr2 191467867 191468019 -61788564 - L1MC5 LINE L1 -50 7911 7750 255 103 0 0 chr2 191468162 191468201 -61788382 + (TAA)n Simple_repeat Simple_repeat 2 40 0 1934 105 3 44 chr2 191468601 191468896 -61787687 + AluSx SINE Alu 13 295 -17 29 70 0 0 chr2 191469910 191469967 -61786616 + AT_rich Low_complexity Low_complexity 1 57 0 264 196 0 0 chr2 191470531 191470582 -61786001 - L2 LINE L2 0 3313 3263 24 67 0 0 chr2 191470710 191470755 -61785828 + AT_rich Low_complexity Low_complexity 1 45 0 745 179 0 8 chr2 191470766 191470889 -61785694 + AluJb SINE Alu 5 126 -186 2371 93 0 0 chr2 191470902 191471203 -61785380 - AluY SINE Alu -10 301 1 517 194 32 108 chr2 191471627 191471813 -61784770 + MER104 DNA MER2_type 5 176 -4 181 289 0 0 chr2 191471848 191471893 -61784690 + L2 LINE L2 3222 3266 -6 6994 180 167 28 chr2 191472023 191473564 -61783019 + MER52A LTR ERV1 1 1755 0 2176 116 3 3 chr2 191473845 191474147 -61782436 + AluSg SINE Alu 1 302 -8 2109 112 0 7 chr2 191475995 191476282 -61780301 + AluSx SINE Alu 1 285 -27 1792 155 0 17 chr2 191476497 191476793 -61779790 - AluJb SINE Alu -21 291 1 2085 89 3 61 chr2 191477052 191477365 -61779218 + AluSx SINE Alu 1 295 -17 191 260 130 26 chr2 191477452 191477529 -61779054 + MIR SINE MIR 170 254 -8 241 229 69 0 chr2 191477873 191477944 -61778639 + MIR SINE MIR 74 143 -65 245 335 43 67 chr2 191478068 191478277 -61778306 + MIR SINE MIR 1 204 -58 1601 280 142 23 chr2 191478317 191479042 -61777541 + L2 LINE L2 1916 2726 -588 1284 293 66 10 chr2 191479042 191479452 -61777131 - LTR16A LTR ERVL 0 450 18 1232 262 62 76 chr2 191479463 191480036 -61776547 + L2 LINE L2 2716 3306 -7 2110 144 0 6 chr2 191480441 191480754 -61775829 - AluJb SINE Alu -1 311 1 1645 204 18 54 chr2 191480787 191481175 -61775408 - MLT1A2 LTR MaLR 0 374 1 380 349 69 6 chr2 191483376 191483551 -61773032 - MIR SINE MIR -75 187 2 223 277 77 77 chr2 191483568 191483698 -61772885 + MIR SINE MIR 53 182 -80 185 0 40 0 chr2 191484634 191484659 -61771924 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1614 158 4 8 chr2 191484682 191484942 -61771641 - AluJb SINE Alu -53 259 1 244 199 249 62 chr2 191485599 191485809 -61770774 - L1ME4a LINE L1 -4 6117 5855 2353 113 0 0 chr2 191485809 191486118 -61770465 - AluSx SINE Alu -3 309 1 244 199 249 62 chr2 191486118 191486148 -61770435 - L1ME4a LINE L1 -266 5855 5832 329 169 0 26 chr2 191486164 191486201 -61770382 + CT-rich Low_complexity Low_complexity 3 39 -38 186 43 0 0 chr2 191486201 191486224 -61770359 + (TTCG)n Simple_repeat Simple_repeat 2 24 0 329 169 0 26 chr2 191486224 191486263 -61770320 + CT-rich Low_complexity Low_complexity 39 77 0 198 91 0 0 chr2 191486261 191486294 -61770289 + (TCTTG)n Simple_repeat Simple_repeat 3 35 0 * 995 190 60 37 chr2 191486298 191486514 -61770069 - AluJo SINE Alu -5 307 87 560 265 92 28 chr2 191486538 191486787 -61769796 - L1ME4a LINE L1 -306 5815 5551 201 300 59 71 chr2 191487154 191487324 -61769259 + L2 LINE L2 2883 3050 -222 218 162 0 0 chr2 191487623 191487660 -61768923 - L2 LINE L2 -217 3055 3019 887 143 14 14 chr2 191487694 191487834 -61768749 + FRAM SINE Alu 20 159 -17 1623 309 127 44 chr2 191487840 191489240 -61767343 - L2 LINE L2 -343 2971 1456 839 127 0 0 chr2 191489241 191489367 -61767216 - AluSg/x SINE Alu -1 308 183 393 240 10 29 chr2 191489525 191489629 -61766954 + MER5B DNA MER1_type 76 177 -1 274 328 126 8 chr2 191489736 191489855 -61766728 - L2 LINE L2 -4 3268 3136 1712 140 0 60 chr2 191489911 191490211 -61766372 + AluJo SINE Alu 1 282 -30 226 333 0 0 chr2 191491239 191491302 -61765281 + CT-rich Low_complexity Low_complexity 4 66 0 250 204 56 0 chr2 191491302 191491356 -61765227 - L2 LINE L2 -5 3308 3252 1859 141 141 0 chr2 191491430 191491735 -61764848 + MER7A DNA MER2_type 1 346 0 2015 117 6 55 chr2 191491786 191492111 -61764472 - AluSx SINE Alu -3 309 1 26 0 0 0 chr2 191492411 191492437 -61764146 + AT_rich Low_complexity Low_complexity 1 26 0 246 270 24 38 chr2 191492472 191492619 -61763964 - LTR16A1 LTR ERVL -2 455 346 1742 142 4 0 chr2 191493213 191493460 -61763123 - AluSx SINE Alu -62 250 3 3710 144 36 16 chr2 191494666 191495279 -61761304 - MER51A LTR ERV1 -9 625 1 3484 74 7 9 chr2 191495630 191496078 -61760505 - L1PA10 LINE L1 -16 6152 5706 2372 103 0 0 chr2 191496088 191496390 -61760193 - AluSg SINE Alu -8 302 1 254 379 0 0 chr2 191496682 191496769 -61759814 - L2 LINE L2 0 3272 3186 187 209 0 23 chr2 191496840 191496883 -61759700 - L2 LINE L2 -338 2975 2934 180 0 0 0 chr2 191498623 191498643 -61757940 + (ATTG)n Simple_repeat Simple_repeat 4 23 0 2190 135 3 0 chr2 191499613 191499924 -61756659 - AluSq SINE Alu -1 312 1 2004 147 6 13 chr2 191500402 191500716 -61755867 - AluJb SINE Alu 0 312 1 1980 125 7 14 chr2 191501294 191501582 -61755001 - AluSq SINE Alu -27 286 1 25 31 0 0 chr2 191502158 191502190 -61754393 + AT_rich Low_complexity Low_complexity 1 32 0 1981 131 28 0 chr2 191503107 191503397 -61753186 + AluSx SINE Alu 1 298 -14 2114 99 24 10 chr2 191503491 191503785 -61752798 + AluSg SINE Alu 1 298 -12 3183 94 12 18 chr2 191503979 191504492 -61752091 - L1MA3 LINE L1 -155 6150 5641 236 170 19 0 chr2 191504489 191504542 -61752041 - L1 LINE L1 -2420 5145 5092 * 6925 78 6 3 chr2 191504549 191506288 -61750295 - L1PA8 LINE L1 -11 6161 4408 183 42 0 0 chr2 191506290 191506314 -61750269 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 2153 81 7 0 chr2 191506314 191506622 -61749961 - L1PA8 LINE L1 -1791 4355 4046 * 5743 185 13 53 chr2 191506619 191508136 -61748447 - L1 LINE L1 -2456 5109 3654 * 7717 178 8 17 chr2 191508132 191508179 -61748404 - L1 LINE L1 -6125 1440 1394 2076 119 64 25 chr2 191508179 191508540 -61748043 - THE1C LTR MaLR 0 375 1 7717 178 8 17 chr2 191508540 191509921 -61746662 - L1 LINE L1 -6171 1394 24 284 236 0 42 chr2 191510235 191510307 -61746276 - Tigger2a DNA MER2_type -1 433 365 626 236 0 8 chr2 191510307 191510430 -61746153 - FLAM_A SINE Alu -15 127 6 1475 93 43 90 chr2 191510445 191510526 -61746057 - Tigger2a DNA MER2_type -2422 286 203 1834 180 0 13 chr2 191510526 191510842 -61745741 + AluJb SINE Alu 1 312 0 1475 93 43 90 chr2 191510842 191511060 -61745523 - Tigger2a DNA MER2_type -2505 203 1 2622 36 3 0 chr2 191511271 191511576 -61745007 + AluY SINE Alu 1 306 -5 2343 98 3 3 chr2 191511963 191512270 -61744313 - AluSq SINE Alu -6 307 1 1756 178 114 42 chr2 191512280 191512423 -61744160 + L1MD1 LINE L1 1777 1908 -4632 1764 158 16 32 chr2 191512423 191512739 -61743844 - AluJb SINE Alu -1 311 1 1756 178 114 42 chr2 191512739 191513139 -61743444 + L1MD1 LINE L1 1908 2359 -4181 * 4873 200 56 52 chr2 191513130 191513610 -61742973 + L1MD1 LINE L1 3967 4443 -2193 2190 105 0 0 chr2 191513610 191513895 -61742688 + AluSx SINE Alu 10 294 -18 2352 97 0 3 chr2 191513896 191514205 -61742378 + AluSg SINE Alu 1 308 -2 4873 200 56 52 chr2 191514205 191514560 -61742023 + L1MD1 LINE L1 4443 4795 -1841 2071 122 30 7 chr2 191514560 191514856 -61741727 + AluSq SINE Alu 1 303 -10 4873 200 56 52 chr2 191514856 191515506 -61741077 + L1MD1 LINE L1 4795 5441 -1195 2224 100 7 16 chr2 191515506 191515816 -61740767 + AluY SINE Alu 1 307 -4 4873 200 56 52 chr2 191515816 191516981 -61739602 + L1MD1 LINE L1 5441 6635 -1 483 322 69 34 chr2 191516986 191517391 -61739192 - L2 LINE L2 -78 3194 2771 947 149 16 5 chr2 191517415 191517607 -61738976 - AluJb SINE Alu -26 286 2 1170 308 116 51 chr2 191517613 191518194 -61738389 - L2 LINE L2 -569 2745 2203 873 137 0 8 chr2 191518194 191518318 -61738265 - FLAM_C SINE Alu -9 124 2 1170 308 116 51 chr2 191518318 191518519 -61738064 - L2 LINE L2 -1111 2203 1901 2614 125 41 10 chr2 191518519 191518934 -61737649 - MSTA LTR MaLR 0 428 1 1170 308 116 51 chr2 191518934 191518997 -61737586 - L2 LINE L2 -1413 1901 1844 187 282 164 18 chr2 191519116 191519226 -61737357 - MIR SINE MIR -95 167 42 1564 178 23 26 chr2 191519280 191519589 -61736994 - AluJo SINE Alu -3 309 2 2277 98 0 7 chr2 191520326 191520623 -61735960 - AluSq SINE Alu -18 295 1 858 153 0 0 chr2 191520654 191520778 -61735805 - FLAM_C SINE Alu -9 124 1 3278 167 84 5 chr2 191522010 191522668 -61733915 - MER50 LTR ERV1 -23 711 2 784 154 0 28 chr2 191523091 191523234 -61733349 - FRAM SINE Alu -33 143 5 2285 118 0 0 chr2 191523553 191523858 -61732725 + AluSx SINE Alu 1 305 -7 190 336 154 20 chr2 191524028 191524177 -61732406 - MIR SINE MIR -84 178 10 1793 104 50 50 chr2 191524942 191525245 -61731338 + AluSc SINE Alu 1 303 0 602 14 0 0 chr2 191525315 191525385 -61731198 - L1PA5 LINE L1 -8 6146 6077 2382 81 7 3 chr2 191525456 191525765 -61730818 - AluSg SINE Alu 0 310 1 560 161 144 17 chr2 191526027 191526145 -61730438 - FLAM_C SINE Alu 0 133 1 1593 219 70 35 chr2 191526217 191526674 -61729909 + MLT1D LTR MaLR 1 473 -32 667 143 24 8 chr2 191526672 191526798 -61729785 - MLT1C LTR MaLR -334 133 6 * 219 139 0 0 chr2 191529409 191529445 -61727138 + (TCCC)n Simple_repeat Simple_repeat 3 38 0 1355 169 58 0 chr2 191529445 191529705 -61726878 - AluSx SINE Alu -24 288 14 254 278 151 32 chr2 191530336 191530462 -61726121 - MIR SINE MIR 0 262 122 872 130 0 51 chr2 191530667 191530805 -61725778 - FLAM_C SINE Alu -1 132 2 1807 152 7 7 chr2 191531179 191531475 -61725108 + AluJb SINE Alu 2 297 -15 1410 129 31 5 chr2 191531888 191532112 -61724471 + MER30 DNA MER1_type 1 230 0 480 284 153 13 chr2 191532948 191533177 -61723406 - MIR SINE MIR -1 261 1 643 250 147 0 chr2 191533549 191533705 -61722878 + MER5A DNA MER1_type 10 188 -1 21 0 0 0 chr2 191533733 191533754 -61722829 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr2 191533775 191533795 -61722788 + (T)n Simple_repeat Simple_repeat 1 20 0 26 0 0 0 chr2 191534259 191534285 -61722298 + AT_rich Low_complexity Low_complexity 1 26 0 1078 217 132 22 chr2 191534362 191534634 -61721949 - AluJo SINE Alu 0 302 1 1009 173 124 2 chr2 191534967 191535239 -61721344 + MER33 DNA MER1_type 1 294 -30 1572 152 3 106 chr2 191535327 191535405 -61721178 + AluJb SINE Alu 1 85 -227 1760 184 7 0 chr2 191535405 191535710 -61720873 - AluJb SINE Alu -5 307 1 1572 152 3 106 chr2 191535710 191535979 -61720604 + AluJb SINE Alu 85 312 0 445 128 0 26 chr2 191537018 191537096 -61719487 - AluJ/FRAM SINE Alu -7 305 230 21 0 0 0 chr2 191537171 191537192 -61719391 + AT_rich Low_complexity Low_complexity 1 21 0 797 223 225 48 chr2 191537600 191537824 -61718759 - L2 LINE L2 -5 3308 3125 2014 170 54 79 chr2 191537824 191538002 -61718581 - MLT1D LTR MaLR 0 505 324 2183 94 0 32 chr2 191538002 191538310 -61718273 - AluSg SINE Alu -12 298 1 2014 170 54 79 chr2 191538310 191538648 -61717935 - MLT1D LTR MaLR -181 324 2 797 223 225 48 chr2 191538648 191539014 -61717569 - L2 LINE L2 -188 3125 2591 1051 133 12 18 chr2 191539116 191539281 -61717302 + FRAM SINE Alu 13 176 0 239 231 88 11 chr2 191539291 191539382 -61717201 + L1MEc LINE L1 2230 2327 -4069 630 224 27 16 chr2 191539434 191539617 -61716966 - MLT1E2-int LTR MaLR -1186 185 1 1457 222 129 42 chr2 191539617 191540192 -61716391 - MLT1E2 LTR MaLR 0 626 19 2071 139 0 0 chr2 191540194 191540489 -61716094 + AluSx SINE Alu 1 295 -17 1499 150 68 39 chr2 191540699 191540979 -61715604 + AluJb SINE Alu 2 289 -23 706 200 53 7 chr2 191541037 191541187 -61715396 + FRAM SINE Alu 5 161 -5 225 0 0 0 chr2 191541632 191541657 -61714926 + (TA)n Simple_repeat Simple_repeat 2 26 0 183 325 44 97 chr2 191542361 191542475 -61714108 + L2 LINE L2 3125 3232 -40 969 175 18 6 chr2 191542587 191542753 -61713830 - FRAM SINE Alu -4 172 5 888 230 93 93 chr2 191542806 191543311 -61713272 + MLT1D LTR MaLR 1 505 0 1391 209 90 9 chr2 191543454 191543799 -61712784 - MLT1D LTR MaLR -5 500 128 2068 106 3 3 chr2 191543948 191544232 -61712351 + AluSq SINE Alu 23 306 -7 1367 228 129 26 chr2 191544345 191544802 -61711781 - MLT1D LTR MaLR 0 505 2 1168 266 162 19 chr2 191544881 191545830 -61710753 - HAL1 LINE L1 -302 2205 1121 2051 123 10 7 chr2 191545871 191546163 -61710420 - AluSx SINE Alu -15 297 5 2518 65 0 0 chr2 191546262 191546568 -61710015 + AluY SINE Alu 1 306 -5 429 329 185 30 chr2 191546835 191547133 -61709450 - HAL1 LINE L1 -1838 669 326 810 284 73 56 chr2 191547318 191547761 -61708822 - MER77 LTR ERV1 -7 598 223 856 159 243 0 chr2 191548670 191548859 -61707724 - MER46A DNA MER2_type 0 236 2 2206 120 0 0 chr2 191549350 191549641 -61706942 + AluSx SINE Alu 2 292 -20 3655 187 74 15 chr2 191549860 191549985 -61706598 - L1P4 LINE L1 -545 5621 5505 2012 131 10 13 chr2 191549985 191550291 -61706292 - AluSx SINE Alu -7 305 1 3655 187 74 15 chr2 191550291 191551413 -61705170 - L1P4 LINE L1 -661 5505 4314 3315 136 29 5 chr2 191551417 191552042 -61704541 - L1MA4A LINE L1 -360 5943 5304 1505 186 64 11 chr2 191552066 191552330 -61704253 - AluSg SINE Alu -26 284 7 1476 179 96 50 chr2 191552583 191553081 -61703502 - Charlie1b DNA MER1_type 0 523 3 325 273 227 0 chr2 191553117 191553271 -61703312 + MIR SINE MIR 21 209 -53 2087 113 13 7 chr2 191553297 191553598 -61702985 - AluSg SINE Alu -7 303 1 756 307 98 43 chr2 191553630 191554204 -61702379 + L2 LINE L2 2710 3313 0 324 249 58 29 chr2 191555089 191555262 -61701321 - L1MC4 LINE L1 -1 8041 7864 408 20 0 0 chr2 191555501 191555550 -61701033 + (CA)n Simple_repeat Simple_repeat 2 50 0 2241 101 16 57 chr2 191555686 191556071 -61700512 - L1PB1 LINE L1 -1 6150 5782 422 299 15 30 chr2 191556090 191556224 -61700359 - MIR3 SINE MIR -37 171 40 2591 86 17 0 chr2 191556291 191556640 -61699943 - THE1A LTR MaLR 0 355 1 11240 94 15 2 chr2 191556640 191558196 -61698387 - THE1A-int LTR MaLR 0 1580 4 2520 95 23 0 chr2 191558198 191558545 -61698038 - THE1A LTR MaLR 0 355 1 22 0 0 0 chr2 191558666 191558688 -61697895 + AT_rich Low_complexity Low_complexity 1 22 0 954 157 52 0 chr2 191558969 191559122 -61697461 - FRAM SINE Alu -16 160 1 1998 119 3 17 chr2 191559740 191560034 -61696549 - AluSx SINE Alu -22 290 1 226 253 21 11 chr2 191560205 191560300 -61696283 - HAL1b LINE L1 -6 1342 1247 454 259 156 7 chr2 191561980 191562115 -61694468 - MIR3 SINE MIR -35 173 19 256 333 10 39 chr2 191562341 191562443 -61694140 - L2 LINE L2 -7 3306 3208 22 0 0 0 chr2 191563232 191563254 -61693329 + AT_rich Low_complexity Low_complexity 1 22 0 2021 123 34 3 chr2 191563776 191564068 -61692515 - AluSx SINE Alu -11 301 1 22 0 0 0 chr2 191564161 191564183 -61692400 + AT_rich Low_complexity Low_complexity 1 22 0 1172 37 0 0 chr2 191564190 191564325 -61692258 + AluY SINE Alu 1 135 -176 1583 182 168 29 chr2 191565072 191565446 -61691137 - MSTB LTR MaLR 0 426 1 347 267 164 17 chr2 191565479 191565711 -61690872 - L1MC5 LINE L1 -44 7917 7652 1866 152 0 0 chr2 191565713 191565983 -61690600 - AluSx SINE Alu -14 298 29 757 329 132 19 chr2 191567343 191568011 -61688572 - HERVL LTR ERVL -1855 3799 3057 2021 85 55 4 chr2 191568276 191568570 -61688013 - AluSq SINE Alu 0 308 1 1400 161 86 19 chr2 191568592 191568652 -61687931 - L1MB3 LINE L1 -1 6179 6124 1642 151 54 4 chr2 191568652 191568930 -61687653 - AluJb SINE Alu -16 296 5 1400 161 86 19 chr2 191568930 191569289 -61687294 - L1MB3 LINE L1 -56 6124 5761 5190 124 44 0 chr2 191569457 191570402 -61686181 - L1PA15 LINE L1 -8 7595 6628 2432 84 48 21 chr2 191570402 191570781 -61685802 + MLT2A1 LTR ERVL 1 389 -55 234 116 0 0 chr2 191570781 191570824 -61685759 + (TA)n Simple_repeat Simple_repeat 2 44 0 338 82 0 0 chr2 191570824 191570873 -61685710 - L1P LINE L1 -3575 2571 2523 326 38 38 19 chr2 191570896 191570949 -61685634 + MLT2A2 LTR ERVL 399 452 -1 6936 190 14 2 chr2 191570972 191571336 -61685247 - L1PA15 LINE L1 -964 6620 6262 1829 114 4 4 chr2 191571336 191571600 -61684983 - AluSq SINE Alu 0 313 50 6936 190 14 2 chr2 191571600 191572706 -61683877 - L1PA15 LINE L1 -1322 6262 5132 258 105 0 0 chr2 191572713 191572751 -61683832 + (TCTTG)n Simple_repeat Simple_repeat 2 39 0 1591 98 49 124 chr2 191572751 191573057 -61683526 - AluSx SINE Alu -28 284 2 2429 201 54 8 chr2 191573061 191573723 -61682860 - L1PA15 LINE L1 -3143 4441 3749 2454 60 0 10 chr2 191573727 191574028 -61682555 - AluY SINE Alu -9 302 5 2292 198 32 2 chr2 191574037 191574562 -61682021 - L1PA15 LINE L1 -4715 2859 2319 304 130 29 29 chr2 191574613 191574682 -61681901 + CT-rich Low_complexity Low_complexity 1 69 0 759 201 6 13 chr2 191574682 191574841 -61681742 - AluSg/x SINE Alu -5 307 150 698 121 0 0 chr2 191574941 191575040 -61681543 - AluS SINE Alu -213 99 1 323 346 16 16 chr2 191576073 191576394 -61680189 - L1PA15 LINE L1 -7260 321 1 1685 104 0 0 chr2 191576873 191577095 -61679488 - AluSg/x SINE Alu -10 300 79 2235 84 0 3 chr2 191577295 191577605 -61678978 - AluSq SINE Alu 0 311 3 2940 58 0 5 chr2 191577765 191578146 -61678437 - L1PA8 LINE L1 0 6172 5794 279 0 0 0 chr2 191578146 191578177 -61678406 + (TA)n Simple_repeat Simple_repeat 2 32 0 2643 95 62 42 chr2 191578678 191579131 -61677452 - L1P3 LINE L1 -4955 1506 1045 1744 230 49 44 chr2 191579128 191579432 -61677151 - L1ME1 LINE L1 -264 5902 5592 * 2200 109 3 0 chr2 191579432 191579725 -61676858 + AluSx SINE Alu 1 294 -18 1744 230 49 44 chr2 191579725 191579994 -61676589 - L1ME1 LINE L1 -574 5592 5326 377 211 82 68 chr2 191580965 191581112 -61675471 + MIR3 SINE MIR 7 155 -53 195 182 15 136 chr2 191581133 191581199 -61675384 - MIR3 SINE MIR -32 176 119 207 0 0 0 chr2 191582040 191582063 -61674520 + (A)n Simple_repeat Simple_repeat 1 23 0 1699 219 48 18 chr2 191582123 191582565 -61674018 - MER21B LTR ERV1 -264 599 145 645 260 105 6 chr2 191583147 191583328 -61673255 - MIR SINE MIR -13 249 51 263 92 46 0 chr2 191583741 191583806 -61672777 + L1PA16 LINE L1 5952 6019 -147 2244 113 0 0 chr2 191584065 191584388 -61672195 - AluSx SINE Alu 0 312 1 1989 158 0 0 chr2 191584496 191584807 -61671776 - AluJb SINE Alu -1 311 1 925 101 21 74 chr2 191585952 191586141 -61670442 - L1MB1 LINE L1 -1 6167 5989 280 366 61 6 chr2 191586555 191586719 -61669864 - MIR SINE MIR -43 219 47 4369 134 9 6 chr2 191587561 191588782 -61667801 - L1M1 LINE L1 -547 5758 4532 8530 94 11 9 chr2 191588883 191588932 -61667651 - L1P LINE L1 -1280 4866 4819 243 0 0 0 chr2 191588932 191588959 -61667624 + (TTCTG)n Simple_repeat Simple_repeat 3 29 0 8530 94 11 9 chr2 191588959 191590212 -61666371 - L1P LINE L1 -1327 4819 3561 468 296 70 15 chr2 191590370 191590574 -61666009 - MIR SINE MIR -16 246 33 387 277 88 25 chr2 191591161 191591320 -61665263 - MLT1K LTR MaLR -8 580 412 983 251 82 44 chr2 191591360 191591750 -61664833 + MLT1I LTR MaLR 5 409 0 207 0 0 0 chr2 191592067 191592090 -61664493 + (CA)n Simple_repeat Simple_repeat 2 24 0 198 0 0 0 chr2 191592506 191592528 -61664055 + (TG)n Simple_repeat Simple_repeat 1 22 0 * 303 28 0 0 chr2 191592527 191592563 -61664020 + (GA)n Simple_repeat Simple_repeat 1 36 0 22 0 0 0 chr2 191592881 191592903 -61663680 + AT_rich Low_complexity Low_complexity 1 22 0 29 47 0 0 chr2 191594114 191594157 -61662426 + AT_rich Low_complexity Low_complexity 1 43 0 617 230 189 23 chr2 191594727 191594944 -61661639 + MIR SINE MIR 10 262 0 844 194 138 47 chr2 191595261 191595581 -61661002 - Charlie1 DNA MER1_type 0 2761 2413 3651 165 8 4 chr2 191595681 191596704 -61659879 - L1PA7 LINE L1 -205 5949 4926 9986 112 3 6 chr2 191596807 191598380 -61658203 + L1P LINE L1 1393 2961 -3185 664 132 0 9 chr2 191598480 191598594 -61657989 - L1MB1 LINE L1 -263 5905 5793 493 227 0 0 chr2 191598595 191598692 -61657891 + L1MB1 LINE L1 5671 5767 -401 2676 36 0 0 chr2 191599225 191599529 -61657054 - AluY SINE Alu -7 304 1 1702 81 56 0 chr2 191599746 191599980 -61656603 - AluY SINE Alu -64 247 1 9154 60 7 28 chr2 191601060 191602268 -61654315 - SVA Other Other -17 1369 188 1343 188 0 32 chr2 191603499 191603598 -61652985 - Tigger1 DNA MER2_type -2104 314 213 1956 141 7 0 chr2 191603598 191603895 -61652688 + AluSg SINE Alu 3 301 -9 1343 188 0 32 chr2 191603895 191604104 -61652479 - Tigger1 DNA MER2_type -2205 213 16 1836 236 6 0 chr2 191604120 191604590 -61651993 + L1MA7 LINE L1 5527 5999 -292 488 171 23 0 chr2 191604909 191604997 -61651586 - MIR SINE MIR -88 174 85 204 331 16 48 chr2 191605105 191605229 -61651354 - L2 LINE L2 -211 3061 2942 293 330 84 22 chr2 191607392 191607571 -61649012 + MIR SINE MIR 21 210 -52 24 0 0 0 chr2 191607868 191607892 -61648691 + AT_rich Low_complexity Low_complexity 1 24 0 2795 107 7 32 chr2 191607906 191608347 -61648236 + MSTB1 LTR MaLR 1 430 -2 609 280 33 20 chr2 191608645 191608795 -61647788 - L2 LINE L2 0 3272 3121 4670 45 2 0 chr2 191609200 191609816 -61646767 + L1P LINE L1 3302 3918 -2228 244 318 0 0 chr2 191611347 191611435 -61645148 + MIR SINE MIR 161 248 -14 28 0 0 0 chr2 191611610 191611638 -61644945 + AT_rich Low_complexity Low_complexity 1 28 0 741 315 14 10 chr2 191611646 191611886 -61644697 - MIR SINE MIR -21 241 4 222 167 0 0 chr2 191612038 191612074 -61644509 + L2 LINE L2 3190 3225 -47 312 237 173 96 chr2 191612161 191612578 -61644005 + MLT1J2 LTR MaLR 1 449 -1 559 310 55 9 chr2 191612978 191613250 -61643333 + L2 LINE L2 2698 2978 -335 696 164 63 0 chr2 191613710 191613869 -61642714 + L1ME3 LINE L1 5780 5948 -214 664 117 0 29 chr2 191613870 191613973 -61642610 + AluS SINE Alu 1 100 -212 3206 140 12 6 chr2 191614073 191614936 -61641647 + L1P3 LINE L1 4786 5650 -504 2278 178 84 4 chr2 191614936 191615460 -61641123 - LTR13 LTR ERVK 0 1007 442 276 30 0 0 chr2 191616079 191616112 -61640471 + (TTCA)n Simple_repeat Simple_repeat 2 34 0 22 35 0 0 chr2 191616348 191616377 -61640206 + AT_rich Low_complexity Low_complexity 1 29 0 349 310 150 0 chr2 191617357 191617457 -61639126 - L2 LINE L2 0 3272 3158 194 316 63 13 chr2 191617486 191617565 -61639018 + MIR3 SINE MIR 112 194 -14 22 0 0 0 chr2 191619145 191619167 -61637416 + AT_rich Low_complexity Low_complexity 1 22 0 211 255 184 20 chr2 191619442 191619540 -61637043 - MIR3 SINE MIR -93 115 2 267 364 107 34 chr2 191620381 191620587 -61635996 + L2 LINE L2 2966 3186 -86 15444 86 3 4 chr2 191621120 191623402 -61633181 - L1P LINE L1 -1471 4675 2396 1032 230 139 12 chr2 191624885 191625137 -61631446 + AluJo SINE Alu 2 285 -17 24 32 0 0 chr2 191625149 191625180 -61631403 + AT_rich Low_complexity Low_complexity 1 31 0 24 32 0 0 chr2 191628141 191628172 -61628411 + AT_rich Low_complexity Low_complexity 1 31 0 268 266 106 18 chr2 191628390 191628503 -61628080 - L2 LINE L2 -1 3312 3190 1975 193 12 47 chr2 191628597 191629083 -61627500 + L1MD2 LINE L1 5534 6002 -357 454 268 198 37 chr2 191629084 191629475 -61627108 - L2 LINE L2 -148 3165 2727 257 262 16 0 chr2 191629482 191629543 -61627040 + L2 LINE L2 3249 3310 -3 * 288 274 0 36 chr2 191629536 191629620 -61626963 - L2 LINE L2 -585 2729 2649 827 277 75 7 chr2 191629628 191629983 -61626600 + L1MC4a LINE L1 5529 5820 -301 25 51 0 0 chr2 191630226 191630265 -61626318 + AT_rich Low_complexity Low_complexity 1 39 0 311 303 25 76 chr2 191630273 191630471 -61626112 + MIR3 SINE MIR 8 195 -13 195 295 16 0 chr2 191630428 191630489 -61626094 + L2 LINE L2 1527 1588 -1726 * 252 77 26 0 chr2 191630499 191630538 -61626045 - MLT1B LTR MaLR 0 390 351 271 225 124 124 chr2 191631885 191632103 -61624480 - MER20 DNA MER1_type -1 218 1 307 351 51 37 chr2 191632264 191632560 -61624023 - LTR16C LTR ERVL -90 401 102 216 410 10 0 chr2 191632912 191633012 -61623571 + L3 LINE CR1 1429 1529 -48 407 337 11 27 chr2 191634537 191634685 -61621898 + MIR SINE MIR 30 176 -63 332 94 19 0 chr2 191634828 191634881 -61621702 - L1MA9 LINE L1 -5 6307 6254 1103 154 11 0 chr2 191635517 191635692 -61620891 - AluSg/x SINE Alu -1 311 135 2293 112 0 0 chr2 191635692 191635987 -61620596 - AluSx SINE Alu -15 297 3 21 0 0 0 chr2 191636161 191636182 -61620401 + AT_rich Low_complexity Low_complexity 1 21 0 182 286 119 48 chr2 191636216 191636342 -61620241 + MIR SINE MIR 5 139 -123 422 284 49 0 chr2 191636745 191636847 -61619736 - L2 LINE L2 -19 3253 3147 1773 267 39 29 chr2 191637226 191637974 -61618609 + L1M4c LINE L1 1080 1834 -4550 448 277 114 37 chr2 191638168 191638889 -61617694 + L1M4c LINE L1 1898 2621 -3761 234 0 0 0 chr2 191639204 191639230 -61617353 + (TA)n Simple_repeat Simple_repeat 2 27 0 16685 87 14 2 chr2 191639230 191642182 -61614401 - L1P3 LINE L1 -390 6097 3114 10820 124 24 15 chr2 191642179 191644473 -61612110 - L1P3 LINE L1 -4133 2328 8 * 1895 63 8 32 chr2 191644732 191644985 -61611598 - AluY SINE Alu -3 308 62 21 36 0 0 chr2 191645120 191645148 -61611435 + AT_rich Low_complexity Low_complexity 1 28 0 5768 190 32 30 chr2 191645909 191647027 -61609556 - L1 LINE L1 -785 5597 4474 1732 195 7 17 chr2 191647027 191647329 -61609254 - AluJo SINE Alu -13 299 1 5768 190 32 30 chr2 191647329 191647739 -61608844 - L1 LINE L1 -1908 4474 4066 828 178 122 0 chr2 191647742 191647956 -61608627 - L1 LINE L1 -1092 5756 5517 * 7665 191 55 10 chr2 191647936 191649826 -61606757 - L1 LINE L1 -1720 5128 3158 3050 208 85 16 chr2 191649805 191650745 -61605838 - L1 LINE L1 -5791 1058 2 * 3277 195 130 6 chr2 191650745 191651677 -61604906 - L1 LINE L1 -3083 3299 2250 2563 186 68 66 chr2 191651684 191652278 -61604305 + MER50 LTR ERV1 14 612 -122 1966 123 10 23 chr2 191652278 191652578 -61604005 - AluSg SINE Alu -14 296 1 2563 186 68 66 chr2 191652578 191652700 -61603883 + MER50 LTR ERV1 612 732 -2 436 227 18 58 chr2 191652700 191652878 -61603705 - L1 LINE L1 -4127 2255 2066 1230 178 17 13 chr2 191652988 191653218 -61603365 + AluJo SINE Alu 50 280 -32 1877 118 41 4 chr2 191653945 191654248 -61602335 + AluSx SINE Alu 1 313 0 1659 244 112 29 chr2 191655060 191655290 -61601293 - MER20B DNA MER1_type -19 764 554 2384 87 3 3 chr2 191655290 191655599 -61600984 - AluSp SINE Alu -4 309 1 1659 244 112 29 chr2 191655599 191656031 -61600552 - MER20B DNA MER1_type -229 554 47 861 139 5 64 chr2 191656335 191656522 -61600061 + MLT1D LTR MaLR 51 226 -279 22 35 0 0 chr2 191656719 191656748 -61599835 + AT_rich Low_complexity Low_complexity 1 29 0 23 68 0 0 chr2 191657255 191657299 -61599284 + AT_rich Low_complexity Low_complexity 1 44 0 197 384 82 37 chr2 191657394 191657879 -61598704 + L2 LINE L2 2140 2646 -668 451 274 96 14 chr2 191658008 191658154 -61598429 + MER5A DNA MER1_type 32 189 0 437 291 63 0 chr2 191658468 191658595 -61597988 - MIR SINE MIR -108 154 20 3903 267 159 15 chr2 191661226 191662826 -61593757 + L2 LINE L2 1353 3173 -140 4817 168 51 51 chr2 191663240 191664971 -61591612 + L1MA9 LINE L1 4329 6070 -242 2052 124 0 0 chr2 191664971 191665273 -61591310 + AluSx SINE Alu 1 302 0 4817 168 51 51 chr2 191665273 191665433 -61591150 + L1MA9 LINE L1 6070 6228 -84 231 146 0 0 chr2 191665442 191665483 -61591100 + (CATATA)n Simple_repeat Simple_repeat 5 45 0 22 0 0 0 chr2 191665505 191665527 -61591056 + AT_rich Low_complexity Low_complexity 1 22 0 327 301 5 101 chr2 191665713 191665922 -61590661 - MER5A DNA MER1_type 0 189 1 665 219 34 0 chr2 191666772 191666891 -61589692 - FLAM_A SINE Alu -10 123 1 890 173 7 135 chr2 191666911 191667016 -61589567 - L1MD3 LINE L1 0 7995 7878 329 179 26 0 chr2 191667016 191667094 -61589489 - L1MA7 LINE L1 -7 6284 6205 890 173 7 135 chr2 191667094 191667174 -61589409 - L1MD3 LINE L1 -117 7878 7857 1854 153 21 0 chr2 191667174 191667461 -61589122 + AluJo SINE Alu 1 293 -19 890 173 7 135 chr2 191667461 191667563 -61589020 - L1MD3 LINE L1 -138 7857 7744 263 182 18 36 chr2 191667589 191667644 -61588939 + MER91 DNA MER1_type 11 64 -76 799 255 82 0 chr2 191667647 191667843 -61588740 - MIR SINE MIR -32 230 19 407 245 9 28 chr2 191667913 191668019 -61588564 + MIR3 SINE MIR 76 179 -29 1392 260 103 0 chr2 191669262 191669670 -61586913 + Zaphod DNA AcHobo 171 620 -3411 23 0 0 0 chr2 191669713 191669736 -61586847 + AT_rich Low_complexity Low_complexity 1 23 0 226 223 138 32 chr2 191669742 191669836 -61586747 + Zaphod DNA AcHobo 622 725 -3306 697 139 0 41 chr2 191669851 191669973 -61586610 - FLAM_A SINE Alu -8 134 18 322 161 134 13 chr2 191669976 191670125 -61586458 + Zaphod DNA AcHobo 706 872 -3159 2177 152 46 31 chr2 191670150 191670684 -61585899 + MLT2A2 LTR ERVL 5 554 0 581 182 8 0 chr2 191670719 191670840 -61585743 + Zaphod DNA AcHobo 908 1029 -3002 1101 162 0 0 chr2 191670863 191671030 -61585553 + FAM SINE Alu 1 40 -9 1485 245 137 10 chr2 191671120 191671536 -61585047 + MLT1F1 LTR MaLR 99 567 0 215 197 82 33 chr2 191671537 191671598 -61584985 + L2 LINE L2 2657 2720 -594 969 254 100 51 chr2 191671627 191672198 -61584385 + L2 LINE L2 2709 3307 -6 341 307 36 29 chr2 191672345 191672485 -61584098 - L2 LINE L2 0 3313 3173 275 338 206 0 chr2 191672510 191672714 -61583869 - L2 LINE L2 -971 2343 2098 817 291 91 23 chr2 191672733 191672923 -61583660 + MLT1I LTR MaLR 27 203 -206 4029 80 26 0 chr2 191672923 191673463 -61583120 + MER41A LTR ERV1 1 554 0 817 291 91 23 chr2 191673463 191673623 -61582960 + MLT1I LTR MaLR 203 401 -8 183 42 0 0 chr2 191673660 191673684 -61582899 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1602 237 117 10 chr2 191673705 191674228 -61582355 - L1MC4a LINE L1 -1 7807 7229 242 370 58 6 chr2 191674691 191674743 -61581840 + L2 LINE L2 1711 1759 -1555 5813 35 15 10 chr2 191674743 191675403 -61581180 - L1PA5 LINE L1 -3 6151 5485 2822 3 0 3 chr2 191675403 191675710 -61580873 - AluYa5 SINE Alu -5 306 1 5813 35 15 10 chr2 191675710 191675765 -61580818 - L1PA5 LINE L1 -669 5485 5432 242 370 58 6 chr2 191675765 191675885 -61580698 + L2 LINE L2 1759 1892 -1422 180 182 76 45 chr2 191676392 191676458 -61580125 - MIR SINE MIR -86 176 109 468 0 0 0 chr2 191676487 191676539 -61580044 + (TG)n Simple_repeat Simple_repeat 2 53 0 1681 65 0 0 chr2 191678252 191678484 -61578099 - AluY SINE Alu 0 315 84 505 222 32 16 chr2 191680378 191680504 -61576079 - MIR SINE MIR -19 243 116 185 364 25 25 chr2 191680884 191681002 -61575581 + L2 LINE L2 2588 2705 -609 800 181 116 0 chr2 191681004 191681159 -61575424 + MSTA LTR MaLR 1 173 -255 * 1401 164 30 15 chr2 191681150 191681413 -61575170 + MER65A LTR ERV1 165 431 -14 441 267 102 16 chr2 191682948 191683263 -61573320 + L1M4 LINE L1 3048 3389 -2757 259 233 23 12 chr2 191683368 191683454 -61573129 + (CA)n Simple_repeat Simple_repeat 2 88 0 240 224 0 0 chr2 191683454 191683503 -61573080 + L1M4 LINE L1 3519 3567 -2579 519 204 157 0 chr2 191683640 191683748 -61572835 + FLAM_C SINE Alu 3 127 -16 314 342 137 17 chr2 191684446 191684680 -61571903 - L1ME LINE L1 -315 5806 5545 477 284 126 42 chr2 191685146 191685619 -61570964 - L1MC5 LINE L1 -44 7917 7382 2272 94 7 7 chr2 191685619 191685926 -61570657 - AluSx SINE Alu -1 311 5 477 284 126 42 chr2 191685926 191686046 -61570537 - L1MC5 LINE L1 -579 7382 7274 483 242 39 7 chr2 191686163 191686316 -61570267 - L1MC4 LINE L1 -786 7256 7099 484 333 201 12 chr2 191687331 191687670 -61568913 + L2 LINE L2 2854 3256 -57 863 50 0 33 chr2 191687677 191687798 -61568785 + L1PA3 LINE L1 6039 6155 0 349 298 51 79 chr2 191687926 191688201 -61568382 - MLT1L LTR MaLR -160 455 108 706 112 0 0 chr2 191688374 191688472 -61568111 + AluS SINE Alu 1 98 -215 1722 118 4 16 chr2 191688472 191688727 -61567856 + AluSx SINE Alu 43 294 -18 200 149 21 0 chr2 191688835 191688882 -61567701 + A-rich Low_complexity Low_complexity 3 50 0 236 209 109 91 chr2 191688991 191689101 -61567482 + MIR SINE MIR 95 206 -56 1621 174 42 70 chr2 191690333 191690719 -61565864 - THE1C LTR MaLR 0 375 1 216 0 0 0 chr2 191691051 191691075 -61565508 + (TTTTTA)n Simple_repeat Simple_repeat 2 25 0 1887 193 14 34 chr2 191692816 191693179 -61563404 - L1MB8 LINE L1 0 6178 5824 2022 113 7 29 chr2 191693179 191693488 -61563095 - AluSq SINE Alu -11 302 1 1887 193 14 34 chr2 191693488 191693564 -61563019 - L1MB8 LINE L1 -354 5824 5748 228 182 0 0 chr2 191694186 191694230 -61562353 + T-rich Low_complexity Low_complexity 1 44 0 1834 172 7 0 chr2 191694394 191694690 -61561893 - AluSx SINE Alu -14 298 1 1863 197 21 10 chr2 191695093 191695479 -61561104 - MLT1B LTR MaLR 0 390 1 228 333 56 8 chr2 191695848 191695974 -61560609 - HAL1 LINE L1 -2374 133 2 2714 71 8 11 chr2 191697418 191697782 -61558801 - L1PA7 LINE L1 -7 6147 5785 26 0 0 0 chr2 191698141 191698167 -61558416 + AT_rich Low_complexity Low_complexity 1 26 0 383 94 0 0 chr2 191698278 191698331 -61558252 + MADE1 DNA Mariner 1 53 -27 31 26 0 0 chr2 191698332 191698370 -61558213 + AT_rich Low_complexity Low_complexity 1 38 0 326 231 142 60 chr2 191698718 191698852 -61557731 + MIR SINE MIR 45 189 -73 829 304 156 14 chr2 191699675 191700162 -61556421 - Tigger8 DNA MER2_type -85 581 26 414 382 30 20 chr2 191700695 191700894 -61555689 + MIR3 SINE MIR 8 208 0 390 196 87 82 chr2 191701222 191701406 -61555177 - L1ME4a LINE L1 0 6121 5937 874 136 0 0 chr2 191701474 191701592 -61554991 + FLAM_C SINE Alu 1 118 -25 213 333 162 18 chr2 191701822 191701933 -61554650 + L2 LINE L2 3137 3263 -9 246 307 10 0 chr2 191702250 191702351 -61554232 - MER113 DNA MER1_type? -417 104 3 28 29 0 0 chr2 191702438 191702473 -61554110 + AT_rich Low_complexity Low_complexity 1 35 0 3345 140 24 114 chr2 191702473 191702534 -61554049 - L1MA7 LINE L1 -4 6287 6222 1780 165 7 10 chr2 191702534 191702825 -61553758 - AluJb SINE Alu -22 290 1 3345 140 24 114 chr2 191702825 191703587 -61552996 - L1MA7 LINE L1 -69 6222 5538 1466 50 0 0 chr2 191703638 191703817 -61552766 + AluY SINE Alu 133 311 0 1511 187 95 12 chr2 191705184 191705521 -61551062 - MLT1A1 LTR MaLR 0 365 1 1474 167 10 47 chr2 191706745 191706926 -61549657 - AluJb SINE Alu -3 309 142 225 0 0 0 chr2 191706926 191706951 -61549632 + (TA)n Simple_repeat Simple_repeat 2 26 0 1474 167 10 47 chr2 191706951 191707069 -61549514 - AluJb SINE Alu -170 142 21 519 221 72 56 chr2 191708541 191708790 -61547793 + MER112 DNA MER1_type 4 256 0 628 241 8 38 chr2 191708888 191709021 -61547562 + L2 LINE L2 3140 3268 -4 218 239 14 0 chr2 191710604 191710675 -61545908 + (TA)n Simple_repeat Simple_repeat 2 73 0 487 248 65 0 chr2 191710889 191711042 -61545541 + L1MC5 LINE L1 7677 7839 -122 340 360 27 50 chr2 191711873 191712134 -61544449 + L2 LINE L2 2911 3165 -107 266 245 96 21 chr2 191714596 191714690 -61541893 - L2 LINE L2 -8 3264 3164 271 167 83 0 chr2 191715242 191715314 -61541269 - MLT1K LTR MaLR 0 588 511 3105 79 56 5 chr2 191715467 191715511 -61541072 - MLT2A2 LTR ERVL 0 453 413 238 25 25 25 chr2 191715511 191715551 -61541032 + (TA)n Simple_repeat Simple_repeat 2 41 0 3105 79 56 5 chr2 191715551 191715937 -61540646 - MLT2A2 LTR ERVL -40 413 1 803 271 60 16 chr2 191716116 191716367 -61540216 - MIR SINE MIR 0 262 1 264 236 0 79 chr2 191716499 191716588 -61539995 + L2 LINE L2 3231 3312 -1 26 64 0 0 chr2 191717015 191717062 -61539521 + AT_rich Low_complexity Low_complexity 1 47 0 1987 120 7 0 chr2 191717062 191717337 -61539246 - AluSq SINE Alu -36 277 1 201 222 0 37 chr2 191717873 191717927 -61538656 + (CAAA)n Simple_repeat Simple_repeat 2 53 0 188 225 0 0 chr2 191718808 191718848 -61537735 - L2 LINE L2 -5 3308 3269 1984 131 14 3 chr2 191718885 191719176 -61537407 + AluSx SINE Alu 1 294 -18 605 365 21 23 chr2 191719776 191720209 -61536374 - HERV16 LTR ERVL -4550 446 15 303 214 0 0 chr2 191720511 191720567 -61536016 - MIR SINE MIR 0 262 207 2418 31 0 17 chr2 191722153 191722481 -61534102 + AluY SINE Alu 1 323 0 265 208 0 0 chr2 191723086 191723134 -61533449 + L1MC4a LINE L1 6542 6589 -1219 435 228 141 83 chr2 191723335 191723576 -61533007 + L1MC5 LINE L1 7271 7525 -436 245 234 102 62 chr2 191723665 191723720 -61532863 + L1ME3A LINE L1 5962 6013 -157 1950 143 48 25 chr2 191723720 191724076 -61532507 + THE1B LTR MaLR 1 364 0 245 234 102 62 chr2 191724076 191724148 -61532435 + L1ME3A LINE L1 6013 6094 -76 332 308 37 65 chr2 191724191 191724405 -61532178 - MLT1K LTR MaLR -55 533 326 464 264 46 6 chr2 191724511 191724685 -61531898 + Tigger8 DNA MER2_type 282 462 -204 1208 77 0 0 chr2 191726606 191726762 -61529821 - L1PA5 LINE L1 -8 6146 5991 5959 48 5 0 chr2 191726762 191728004 -61528579 + L1PA5 LINE L1 4739 5987 -167 224 114 45 0 chr2 191729245 191729289 -61527294 + CT-rich Low_complexity Low_complexity 3 48 0 1790 133 11 0 chr2 191729290 191729560 -61527023 - AluSx SINE Alu -39 273 1 1727 127 3 60 chr2 191729609 191729923 -61526660 + AluSc SINE Alu 3 298 -11 1624 149 44 10 chr2 191730560 191730855 -61525728 + L1PB4 LINE L1 5851 6155 -1 2327 152 13 10 chr2 191730958 191731346 -61525237 - L1PA16 LINE L1 -9 6157 5769 1162 172 157 16 chr2 191731367 191731801 -61524782 - MER39 LTR ERV1 -155 552 1 5358 183 31 10 chr2 191732280 191732443 -61524140 - L1PA16 LINE L1 -365 5801 5643 1992 122 61 25 chr2 191732443 191732803 -61523780 - THE1C LTR MaLR 0 375 3 5358 183 31 10 chr2 191732803 191733719 -61522864 - L1PA16 LINE L1 -523 5643 4674 1848 161 3 7 chr2 191733719 191734029 -61522554 - AluSx SINE Alu -3 309 1 5358 183 31 10 chr2 191734029 191734679 -61521904 - L1PA16 LINE L1 -1492 4674 4039 713 250 9 38 chr2 191734860 191734939 -61521644 - MIR SINE MIR -28 234 154 3514 114 26 32 chr2 191734939 191735375 -61521208 - L1MA8 LINE L1 -12 6279 5842 2052 110 0 0 chr2 191735375 191735657 -61520926 - AluSc SINE Alu -7 302 21 3514 114 26 32 chr2 191735657 191735762 -61520821 - L1MA8 LINE L1 -449 5842 5740 2035 143 32 27 chr2 191735762 191736132 -61520451 + THE1C LTR MaLR 1 372 -3 3514 114 26 32 chr2 191736132 191736205 -61520378 - L1MA8 LINE L1 -551 5740 5668 713 250 9 38 chr2 191736205 191736337 -61520246 - MIR SINE MIR -108 154 29 226 191 0 0 chr2 191736841 191736883 -61519700 - MLT1K LTR MaLR 0 588 547 1649 229 23 9 chr2 191737449 191737784 -61518799 - L1ME1 LINE L1 -5 6161 5816 1723 174 25 0 chr2 191737784 191738134 -61518449 - AluJb SINE Alu 0 357 1 1649 229 23 9 chr2 191738134 191738224 -61518359 - L1ME1 LINE L1 -350 5816 5729 * 2815 229 79 55 chr2 191738209 191739351 -61517232 - L1ME1 LINE L1 -1786 4360 3192 345 100 0 0 chr2 191740272 191740322 -61516261 + (TG)n Simple_repeat Simple_repeat 2 51 0 30 0 0 0 chr2 191741211 191741241 -61515342 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr2 191741288 191741311 -61515272 + AT_rich Low_complexity Low_complexity 1 23 0 236 203 31 0 chr2 191741340 191741404 -61515179 + CT-rich Low_complexity Low_complexity 3 68 0 381 22 0 0 chr2 191742253 191742299 -61514284 + (TG)n Simple_repeat Simple_repeat 1 46 0 321 155 0 0 chr2 191742529 191742587 -61513996 + (TCCA)n Simple_repeat Simple_repeat 4 61 0 2624 151 24 19 chr2 191742899 191743467 -61513116 + L1MA4A LINE L1 5411 6062 -241 326 369 109 19 chr2 191743581 191743893 -61512690 - LTR67 LTR ERVL -216 341 2 1752 178 10 0 chr2 191744153 191744457 -61512126 - AluSx SINE Alu -5 307 1 1423 143 153 30 chr2 191745215 191745516 -61511067 + MER44D DNA MER2_type 1 608 -1 305 350 30 68 chr2 191745790 191745919 -61510664 + MIR SINE MIR 2 119 -143 1678 152 25 48 chr2 191745919 191746234 -61510349 - AluJo SINE Alu -2 310 3 305 350 30 68 chr2 191746234 191746341 -61510242 + MIR SINE MIR 119 229 -33 204 322 99 13 chr2 191746371 191746523 -61510060 + MIR SINE MIR 98 262 0 42 0 0 0 chr2 191746778 191746820 -61509763 + AT_rich Low_complexity Low_complexity 1 42 0 3449 36 7 0 chr2 191746822 191747240 -61509343 - L1PA5 LINE L1 -7 6147 5727 1807 207 72 11 chr2 191747241 191747685 -61508898 + LTR22 LTR ERVK 39 509 0 912 44 0 0 chr2 191748321 191748434 -61508149 + (TTTC)n Simple_repeat Simple_repeat 1 113 0 2105 110 0 4 chr2 191748435 191748716 -61507867 - AluSq SINE Alu -33 280 1 1615 164 69 5 chr2 191748899 191749220 -61507363 + MLT1A1 LTR MaLR 1 398 -30 214 294 15 15 chr2 191749414 191749482 -61507101 - L2 LINE L2 -4 3309 3242 677 56 48 39 chr2 191750611 191750863 -61505720 + (TA)n Simple_repeat Simple_repeat 1 254 0 270 0 0 0 chr2 191751375 191751405 -61505178 + (T)n Simple_repeat Simple_repeat 1 30 0 189 0 0 0 chr2 191751605 191751626 -61504957 + (T)n Simple_repeat Simple_repeat 1 21 0 2416 75 0 10 chr2 191752159 191752467 -61504116 - AluY SINE Alu 0 311 7 1639 205 239 36 chr2 191752754 191753335 -61503248 + MER39 LTR ERV1 5 703 -4 8201 138 30 18 chr2 191753425 191754781 -61501802 + Tigger1 DNA MER2_type 26 1398 -1020 1830 160 56 17 chr2 191754781 191755137 -61501446 - THE1C LTR MaLR 0 375 6 5600 134 42 38 chr2 191755143 191756162 -61500421 + Tigger1 DNA MER2_type 1396 2418 0 21 36 0 0 chr2 191757090 191757118 -61499465 + AT_rich Low_complexity Low_complexity 1 28 0 2299 208 34 60 chr2 191757944 191758563 -61498020 + MLT1E2 LTR MaLR 13 615 -11 1250 191 28 35 chr2 191758579 191758867 -61497716 - L1ME3 LINE L1 -25 6137 5852 13695 139 18 117 chr2 191758883 191758910 -61497673 - L1P LINE L1 -3227 2919 2891 13671 87 12 2 chr2 191758910 191759409 -61497174 - L1PA7 LINE L1 -11 6143 5650 6768 88 47 6 chr2 191759409 191760377 -61496206 + LTR13 LTR ERVK 1 1007 0 13671 87 12 2 chr2 191760377 191762562 -61494021 - L1PA7 LINE L1 -504 5650 3447 13695 139 18 117 chr2 191762562 191765762 -61490821 - L1P LINE L1 -3255 2891 12 6468 112 8 12 chr2 191765788 191766782 -61489801 - L1MA3 LINE L1 0 6305 5316 1980 74 0 19 chr2 191766856 191767125 -61489458 - L1PA8 LINE L1 -2 6170 5907 233 143 0 20 chr2 191767126 191767175 -61489408 - L1MA3 LINE L1 -973 5332 5285 699 205 58 32 chr2 191767241 191767431 -61489152 - L1ME3 LINE L1 -363 5799 5605 739 249 105 28 chr2 191767495 191767820 -61488763 + L1ME LINE L1 4799 5148 -998 258 180 20 0 chr2 191767850 191767900 -61488683 + MER34 LTR ERV1 1 51 -491 1258 216 39 59 chr2 191767980 191768375 -61488208 + MER39 LTR ERV1 311 780 -7 1051 238 79 3 chr2 191768376 191768759 -61487824 + L1ME LINE L1 5199 5607 -557 212 369 67 40 chr2 191770610 191770835 -61485748 + L2 LINE L2 2244 2474 -840 189 307 31 63 chr2 191771172 191771299 -61485284 - MIR3 SINE MIR -38 170 48 227 305 67 48 chr2 191771418 191771523 -61485060 - L2 LINE L2 -221 3051 2945 6193 84 14 0 chr2 191773200 191774048 -61482535 - L1PA10 LINE L1 0 6168 5309 313 311 80 26 chr2 191776376 191776527 -61480056 + L2 LINE L2 3139 3297 -16 238 253 181 12 chr2 191776618 191776701 -61479882 - L2 LINE L2 -3 3310 3214 21 0 0 0 chr2 191777103 191777124 -61479459 + AT_rich Low_complexity Low_complexity 1 21 0 1759 179 85 107 chr2 191777844 191778376 -61478207 - MLT2B1 LTR ERVL 0 520 1 666 125 9 0 chr2 191778536 191778648 -61477935 - L1MA2 LINE L1 0 6304 6192 2173 102 0 3 chr2 191779638 191779921 -61476662 + AluSx SINE Alu 1 282 -30 467 284 92 46 chr2 191779990 191780264 -61476319 - MLT1K LTR MaLR -169 419 69 633 49 0 0 chr2 191780837 191780918 -61475665 + (CA)n Simple_repeat Simple_repeat 2 82 0 392 338 77 53 chr2 191781611 191781951 -61474632 - L2 LINE L2 -4 3268 2921 244 266 141 5 chr2 191782000 191782184 -61474399 - HAL1b LINE L1 -451 897 689 278 299 78 26 chr2 191782237 191782391 -61474192 + L2 LINE L2 2914 3075 -197 1952 140 25 13 chr2 191782840 191783154 -61473429 + MER1B DNA MER1_type 1 318 -21 225 128 0 0 chr2 191783269 191783308 -61473275 - L1ME LINE L1 -231 5939 5901 201 284 216 0 chr2 191783350 191783438 -61473145 + L3 LINE CR1 1462 1568 -9 180 0 0 0 chr2 191784027 191784047 -61472536 + (TTCA)n Simple_repeat Simple_repeat 1 20 0 231 278 113 8 chr2 191784900 191785033 -61471550 - L1ME3A LINE L1 -15 6155 6009 2893 68 11 0 chr2 191786396 191786777 -61469806 - L1PA7 LINE L1 -1 6153 5769 * 8558 104 12 8 chr2 191786772 191788836 -61467747 - L1PA7 LINE L1 0 6154 4086 9219 98 9 2 chr2 191788840 191790166 -61466417 + L1P LINE L1 1674 3008 -3138 4960 91 7 11 chr2 191790153 191790865 -61465718 + L1P LINE L1 3714 4422 -1724 * 240 35 0 0 chr2 191790929 191790958 -61465625 + (T)n Simple_repeat Simple_repeat 1 29 0 2156 209 144 41 chr2 191791485 191792331 -61464252 - Zaphod DNA AcHobo -515 3516 2584 4309 138 16 19 chr2 191792353 191793100 -61463483 - L1MA7 LINE L1 -20 7690 6946 13977 157 16 10 chr2 191793114 191793325 -61463258 + Tigger1 DNA MER2_type 14 222 -2196 2219 104 7 0 chr2 191793325 191793624 -61462959 - AluSg SINE Alu -9 301 1 13977 157 16 10 chr2 191793624 191795395 -61461188 + Tigger1 DNA MER2_type 222 1980 -438 8329 95 7 5 chr2 191795395 191797361 -61459222 + L1PA7 LINE L1 4178 6151 -3 13977 157 16 10 chr2 191797361 191797567 -61459016 + Tigger1 DNA MER2_type 1980 2183 -235 2276 116 0 0 chr2 191797567 191797861 -61458722 - AluSg SINE Alu -16 294 1 13977 157 16 10 chr2 191797861 191798060 -61458523 + Tigger1 DNA MER2_type 2183 2418 0 13086 207 49 14 chr2 191798063 191799025 -61457558 - L1MA7 LINE L1 -756 6809 5882 2447 67 0 0 chr2 191799025 191799323 -61457260 - AluY SINE Alu -13 298 1 13086 207 49 14 chr2 191799323 191802362 -61454221 - L1MA7 LINE L1 -1683 5882 2795 522 261 22 0 chr2 191802363 191802501 -61454082 - Zaphod DNA AcHobo -1543 2488 2348 1454 245 55 25 chr2 191802543 191802943 -61453640 + MER97a DNA MER1_type? 13 424 -470 22 0 0 0 chr2 191804662 191804684 -61451899 + AT_rich Low_complexity Low_complexity 1 22 0 214 298 70 35 chr2 191805705 191805819 -61450764 + MIR SINE MIR 88 205 -57 385 327 45 13 chr2 191806373 191806529 -61450054 + MIR SINE MIR 61 221 -41 1742 221 51 22 chr2 191807146 191807595 -61448988 - MLT1C LTR MaLR 0 467 6 324 94 0 0 chr2 191809616 191809669 -61446914 + (TG)n Simple_repeat Simple_repeat 1 53 0 367 319 30 60 chr2 191810481 191810541 -61446042 + L2 LINE L2 2224 2284 -1030 310 57 38 0 chr2 191810541 191810594 -61445989 + (TA)n Simple_repeat Simple_repeat 1 55 0 367 319 30 60 chr2 191810594 191810765 -61445818 + L2 LINE L2 2284 2448 -866 684 341 53 26 chr2 191810813 191811291 -61445292 + L2 LINE L2 2586 3077 -236 249 178 54 124 chr2 191811330 191811459 -61445124 - MLT1L LTR MaLR -16 539 420 276 216 40 27 chr2 191811590 191811664 -61444919 - MLT1I LTR MaLR -267 142 68 293 193 57 57 chr2 191811705 191811793 -61444790 - MLT1L LTR MaLR -349 266 179 297 0 0 0 chr2 191812646 191812679 -61443904 + (TTCA)n Simple_repeat Simple_repeat 2 34 0 212 200 83 17 chr2 191813291 191813351 -61443232 + MIR SINE MIR 49 112 -96 222 222 22 0 chr2 191814721 191814766 -61441817 + L2 LINE L2 3227 3272 0 994 187 0 0 chr2 191815774 191815940 -61440643 + FRAM SINE Alu 1 166 0 439 200 0 0 chr2 191816162 191816237 -61440346 - MER5A DNA MER1_type -100 89 15 2251 93 30 3 chr2 191816268 191816570 -61440013 + AluSx SINE Alu 1 310 -2 1646 123 32 0 chr2 191816979 191817231 -61439352 + L1MC1 LINE L1 6057 6316 -17 283 234 91 0 chr2 191817291 191817368 -61439215 + MLT1E2 LTR MaLR 221 304 -322 1245 229 57 57 chr2 191817368 191817735 -61438848 + MLT1B LTR MaLR 1 367 -23 1319 237 48 22 chr2 191817739 191818055 -61438528 + MLT1E2 LTR MaLR 301 624 -2 254 178 44 0 chr2 191818587 191818632 -61437951 - Charlie8 DNA MER1_type -15 2402 2356 255 42 146 0 chr2 191818733 191818781 -61437802 - MLT2A2 LTR ERVL 0 453 399 236 153 34 34 chr2 191818751 191818810 -61437773 - LTR66 LTR ERVL -154 456 398 * 357 289 0 0 chr2 191818810 191818900 -61437683 - L1MC4 LINE L1 -1339 6703 6614 240 111 0 0 chr2 191818904 191818940 -61437643 + (TA)n Simple_repeat Simple_repeat 2 37 0 25 31 0 0 chr2 191818955 191818987 -61437596 + AT_rich Low_complexity Low_complexity 1 32 0 2773 77 27 25 chr2 191818987 191819019 -61437564 - MLT2A1 LTR ERVL -39 405 375 2268 63 0 18 chr2 191819019 191819305 -61437278 - AluY SINE Alu -10 301 21 2773 77 27 25 chr2 191819305 191819676 -61436907 - MLT2A1 LTR ERVL -69 375 1 332 273 98 38 chr2 191819940 191820072 -61436511 - Charlie8 DNA MER1_type -2186 231 92 721 299 40 12 chr2 191820204 191820455 -61436128 + MIR SINE MIR 5 262 0 270 276 143 0 chr2 191820449 191820547 -61436036 + MIR SINE MIR 119 230 -32 * 288 385 86 28 chr2 191820576 191820901 -61435682 + L2 LINE L2 2917 3260 -12 312 301 60 0 chr2 191821339 191821422 -61435161 + MIR SINE MIR 63 150 -58 204 40 0 0 chr2 191821491 191821516 -61435067 + (TG)n Simple_repeat Simple_repeat 2 26 0 2477 77 0 3 chr2 191821606 191821918 -61434665 + AluY SINE Alu 1 311 0 313 219 14 14 chr2 191823340 191823413 -61433170 + MIR3 SINE MIR 135 207 -1 620 208 28 28 chr2 191824908 191825086 -61431497 - MER53 DNA DNA -8 181 4 408 267 193 19 chr2 191826838 191826999 -61429584 - MER5A DNA MER1_type 0 189 1 225 108 0 0 chr2 191827117 191827154 -61429429 + (CATTC)n Simple_repeat Simple_repeat 3 39 0 272 326 0 33 chr2 191827306 191827398 -61429185 + L2 LINE L2 3184 3272 0 1989 120 10 24 chr2 191828061 191828353 -61428230 - AluSx SINE Alu -24 288 1 1750 133 21 18 chr2 191828551 191828882 -61427701 - L1MA4A LINE L1 -4 6299 5968 1355 81 0 0 chr2 191828894 191829066 -61427517 - AluY SINE Alu -7 304 133 2504 59 0 13 chr2 191829066 191829371 -61427212 - AluY SINE Alu -9 302 2 5670 159 27 12 chr2 191829372 191831155 -61425428 - L1MA4A LINE L1 -351 5952 4153 10376 86 30 7 chr2 191831155 191833425 -61423158 - L1PA7 LINE L1 -1 6153 3854 1750 208 23 75 chr2 191833425 191833984 -61422599 - L1MA4A LINE L1 -3053 3093 2564 933 314 138 20 chr2 191834039 191834801 -61421782 - L2 LINE L2 0 3313 2472 1291 213 28 90 chr2 191834934 191835333 -61421250 - MLT1A2 LTR MaLR 0 374 1 206 319 147 17 chr2 191836994 191837110 -61419473 + L2 LINE L2 2164 2294 -1020 248 303 40 0 chr2 191837898 191837974 -61418609 + L2 LINE L2 2288 2366 -948 6091 100 23 15 chr2 191838387 191839304 -61417279 + L1MA2 LINE L1 5380 6303 -1 361 274 77 67 chr2 191839549 191839757 -61416826 + LTR33 LTR ERVL 1 210 -311 2075 78 45 0 chr2 191839985 191840254 -61416329 + AluSq SINE Alu 1 281 -32 365 222 25 0 chr2 191840624 191840705 -61415878 + MLT1J LTR MaLR 105 187 -324 422 317 66 6 chr2 191840842 191841009 -61415574 + MLT1I LTR MaLR 233 409 0 610 295 60 101 chr2 191841031 191841388 -61415195 + L2 LINE L2 2365 2702 -612 2351 107 0 0 chr2 191841388 191841698 -61414885 - AluSx SINE Alu -2 310 1 610 295 60 101 chr2 191841698 191841777 -61414806 + L2 LINE L2 2702 2783 -531 * 706 253 41 20 chr2 191841767 191842012 -61414571 + L2 LINE L2 3062 3311 -2 294 50 0 0 chr2 191843383 191843423 -61413160 + (CA)n Simple_repeat Simple_repeat 2 41 0 288 89 22 0 chr2 191844318 191844363 -61412220 + L2 LINE L2 3268 3313 0 188 341 116 40 chr2 191844870 191845043 -61411540 + L2 LINE L2 2850 3035 -237 24 32 0 0 chr2 191845373 191845404 -61411179 + AT_rich Low_complexity Low_complexity 1 31 0 1351 174 138 12 chr2 191845416 191845669 -61410914 - AluJo SINE Alu -17 285 1 302 218 241 15 chr2 191847358 191847491 -61409092 + MER117 DNA MER1_type 7 169 -28 1182 259 92 20 chr2 191848243 191848734 -61407849 + MLT1K LTR MaLR 13 585 -3 21 104 0 0 chr2 191848893 191848970 -61407613 + AT_rich Low_complexity Low_complexity 1 77 0 1655 135 8 0 chr2 191850091 191850335 -61406248 + AluSg/x SINE Alu 65 310 -2 252 261 0 0 chr2 191850358 191850404 -61406179 + AluY SINE Alu 210 255 -46 240 150 25 0 chr2 191850373 191850413 -61406170 + Alu SINE Alu 226 266 -37 * 259 302 0 28 chr2 191850440 191850546 -61406037 - L1MC4 LINE L1 -1326 6716 6614 5615 117 31 5 chr2 191850609 191851959 -61404624 - L1PA13 LINE L1 -4 6159 4781 207 69 0 0 chr2 191851959 191851988 -61404595 + (ATTG)n Simple_repeat Simple_repeat 2 30 0 5615 117 31 5 chr2 191851988 191852028 -61404555 - L1PA13 LINE L1 -1382 4781 4744 8274 199 38 20 chr2 191852029 191855088 -61401495 - L1PA13 LINE L1 -3676 3121 1 389 306 32 51 chr2 191855099 191855315 -61401268 - L1MEc LINE L1 -4307 2831 2620 323 256 61 28 chr2 191855390 191855570 -61401013 - L1MEc LINE L1 -4646 2492 2307 712 177 7 20 chr2 191856146 191856293 -61400290 + L1PA15 LINE L1 6021 6165 0 2063 74 0 11 chr2 191856313 191856582 -61400001 + AluY SINE Alu 46 311 0 760 172 46 33 chr2 191856761 191856962 -61399621 + MLT1C LTR MaLR 3 218 -287 380 186 35 0 chr2 191856968 191857081 -61399502 + GA-rich Low_complexity Low_complexity 3 119 0 1043 236 27 8 chr2 191857096 191857354 -61399229 + MLT1C LTR MaLR 204 466 -1 342 256 89 50 chr2 191857513 191857873 -61398710 - L1MEc LINE L1 -4958 2180 1807 1659 154 87 0 chr2 191857898 191858164 -61398419 - AluSx SINE Alu -23 289 1 313 324 55 28 chr2 191858245 191858427 -61398156 - L1MEc LINE L1 -5313 1546 1360 1542 134 93 19 chr2 191858542 191858811 -61397772 + THE1B LTR MaLR 1 289 -75 261 193 35 0 chr2 191858876 191858933 -61397650 - THE1B LTR MaLR -28 336 278 481 130 13 0 chr2 191858961 191859038 -61397545 + THE1B LTR MaLR 298 375 0 11671 99 1 8 chr2 191859038 191860628 -61395955 + THE1B-int LTR MaLR 1 1580 0 1863 127 94 24 chr2 191860628 191860968 -61395615 + THE1B LTR MaLR 1 364 0 23 33 0 0 chr2 191861597 191861627 -61394956 + AT_rich Low_complexity Low_complexity 1 30 0 9773 172 17 27 chr2 191863286 191864050 -61392533 - L1PA13 LINE L1 -1 6813 6043 2250 90 3 0 chr2 191864050 191864351 -61392232 - AluY SINE Alu -9 302 1 9773 172 17 27 chr2 191864351 191866452 -61390131 - L1PA13 LINE L1 -771 6043 3975 7651 27 0 2 chr2 191866462 191867790 -61388793 - L1PA4 LINE L1 -3 6152 4826 2984 223 12 6 chr2 191867790 191868597 -61387986 - L1PA13 LINE L1 -2833 3964 3153 463 242 273 5 chr2 191868595 191868619 -61387964 - L1PA13 LINE L1 -5463 1324 1308 * 591 85 0 0 chr2 191868619 191868701 -61387882 + (CAG)n Simple_repeat Simple_repeat 1 82 0 463 242 273 5 chr2 191868701 191868870 -61387713 - L1PA13 LINE L1 -5479 1308 1079 * 4113 183 6 68 chr2 191868867 191869759 -61386824 - L1PA13 LINE L1 -5950 837 2 231 152 0 0 chr2 191870422 191870468 -61386115 + (TG)n Simple_repeat Simple_repeat 1 46 0 525 232 63 14 chr2 191870658 191870800 -61385783 + L3 LINE CR1 1376 1524 -53 236 353 121 0 chr2 191870778 191870894 -61385689 + L2 LINE L2 3143 3272 0 * 656 317 143 12 chr2 191872170 191872498 -61384085 - L3 LINE CR1 -24 1553 1183 618 268 30 5 chr2 191872543 191872741 -61383842 - L1MD2 LINE L1 -13 6346 6144 1111 160 10 32 chr2 191872741 191872973 -61383610 - MER67D LTR ERV1 -236 278 71 646 208 83 0 chr2 191873046 191873214 -61383369 - L1MD2 LINE L1 -260 6099 5918 2386 179 55 26 chr2 191873830 191874323 -61382260 + MER67D LTR ERV1 4 510 -4 1048 293 90 19 chr2 191874801 191875523 -61381060 + L2 LINE L2 2544 3313 0 381 322 135 10 chr2 191876329 191876537 -61380046 - MIR SINE MIR -6 256 23 268 239 0 0 chr2 191878499 191878570 -61378013 + (TA)n Simple_repeat Simple_repeat 1 71 0 22 35 0 0 chr2 191878934 191878963 -61377620 + AT_rich Low_complexity Low_complexity 1 29 0 19976 110 12 16 chr2 191880522 191886741 -61369842 + L1PA8 LINE L1 58 6482 -5 219 36 0 0 chr2 191886774 191886802 -61369781 + (CA)n Simple_repeat Simple_repeat 2 29 0 22 35 0 0 chr2 191886931 191886960 -61369623 + AT_rich Low_complexity Low_complexity 1 29 0 282 29 0 0 chr2 191888747 191888782 -61367801 + (TG)n Simple_repeat Simple_repeat 2 36 0 366 146 204 0 chr2 191888784 191888887 -61367696 + MER112 DNA MER1_type 87 210 -50 213 273 34 0 chr2 191889308 191889396 -61367187 + (TA)n Simple_repeat Simple_repeat 2 92 0 258 326 41 20 chr2 191889682 191889780 -61366803 + L2 LINE L2 3173 3272 0 3615 52 0 0 chr2 191889819 191890263 -61366320 - L1PA5 LINE L1 -13 6141 5698 242 264 61 78 chr2 191890775 191891006 -61365577 + HAL1 LINE L1 2225 2451 -56 5570 168 24 29 chr2 191891609 191891878 -61364705 - L1MC1 LINE L1 -6 6327 6058 4355 195 4 13 chr2 191891878 191892674 -61363909 - MER54B LTR ERVL -4 789 1 5570 168 24 29 chr2 191892674 191893837 -61362746 - L1MC1 LINE L1 -275 6058 4909 2222 117 7 0 chr2 191894524 191894824 -61361759 - AluSq SINE Alu -11 302 1 1586 193 64 40 chr2 191895011 191895462 -61361121 - MLT1D LTR MaLR -43 462 1 186 327 0 0 chr2 191895553 191895605 -61360978 - MIR SINE MIR -79 129 78 3765 45 7 2 chr2 191895829 191896293 -61360290 + L1PA7 LINE L1 5683 6148 -6 2062 103 57 13 chr2 191897531 191897831 -61358752 - AluSp SINE Alu 0 313 1 333 318 65 9 chr2 191898031 191898138 -61358445 + L2 LINE L2 3160 3272 0 208 237 0 0 chr2 191898224 191898262 -61358321 + MIR3 SINE MIR 145 182 -26 440 184 7 135 chr2 191898585 191898726 -61357857 - MER94 DNA DNA -8 126 4 2479 76 0 10 chr2 191899636 191899950 -61356633 + AluY SINE Alu 1 311 0 521 314 212 9 chr2 191900595 191901093 -61355490 - L2 LINE L2 0 3313 2699 1266 115 16 0 chr2 191901103 191901295 -61355288 - MER30 DNA MER1_type -35 195 1 696 244 116 62 chr2 191901297 191901572 -61355011 - L2 LINE L2 -611 2703 2414 23 33 0 0 chr2 191901586 191901616 -61354967 + AT_rich Low_complexity Low_complexity 1 30 0 188 398 45 0 chr2 191901754 191901842 -61354741 + L2 LINE L2 3145 3236 -36 33 56 0 0 chr2 191901927 191901981 -61354602 + AT_rich Low_complexity Low_complexity 1 54 0 1858 229 43 8 chr2 191902069 191902575 -61354008 - HsTC2 DNA Tc2 -1374 524 1 536 285 127 56 chr2 191902749 191903160 -61353423 + MLT1K LTR MaLR 67 506 -82 228 328 0 98 chr2 191905017 191905086 -61351497 - L3 LINE CR1 -3 1574 1521 597 193 110 110 chr2 191905086 191905304 -61351279 - MER20 DNA MER1_type -1 218 1 228 328 0 98 chr2 191905304 191905356 -61351227 - L3 LINE CR1 -56 1521 1465 745 337 78 16 chr2 191905391 191905762 -61350821 - LTR16C LTR ERVL 0 491 98 24 53 0 0 chr2 191905884 191905922 -61350661 + AT_rich Low_complexity Low_complexity 1 38 0 850 248 158 13 chr2 191905977 191906275 -61350308 + MER58B DNA MER1_type 1 341 0 1189 292 84 3 chr2 191906276 191906667 -61349916 - L3 LINE CR1 -265 1312 890 21 114 0 0 chr2 191906734 191906839 -61349744 + AT_rich Low_complexity Low_complexity 1 105 0 1451 184 88 69 chr2 191907543 191907919 -61348664 - MSTD LTR MaLR -13 383 1 614 227 103 44 chr2 191908020 191908223 -61348360 + MER58C DNA MER1_type 1 215 0 25 51 0 0 chr2 191908368 191908407 -61348176 + AT_rich Low_complexity Low_complexity 1 39 0 283 275 141 0 chr2 191908470 191908591 -61347992 - L1ME3 LINE L1 -57 6107 5972 234 276 236 0 chr2 191909070 191909144 -61347439 - L1MA10 LINE L1 -7 6327 6254 2888 240 62 23 chr2 191909144 191910113 -61346470 - L1ME1 LINE L1 -101 6134 5055 1961 114 4 4 chr2 191910113 191910385 -61346198 + AluSc SINE Alu 38 309 0 2888 240 62 23 chr2 191910385 191911155 -61345428 - L1ME1 LINE L1 -1180 5055 4317 949 229 83 20 chr2 191911158 191911411 -61345172 - L1ME1 LINE L1 -6089 307 39 233 329 98 0 chr2 191911586 191911668 -61344915 - MER5B DNA MER1_type -45 133 44 185 250 45 0 chr2 191911700 191911744 -61344839 - MER5B DNA MER1_type -130 48 3 41908 42 22 1 chr2 191912462 191918479 -61338104 - L1PA4 LINE L1 -8 6147 1 1724 268 75 36 chr2 191918555 191919164 -61337419 + MLT1E1 LTR MaLR 1 633 -21 457 306 122 33 chr2 191919470 191920057 -61336526 - L2 LINE L2 -36 3277 2636 331 293 38 0 chr2 191920781 191920887 -61335696 + MER117 DNA MER1_type 40 149 -48 578 263 95 49 chr2 191921488 191921792 -61334791 + L2 LINE L2 2995 3312 -1 22 0 0 0 chr2 191921794 191921816 -61334767 + AT_rich Low_complexity Low_complexity 1 22 0 342 370 84 30 chr2 191921922 191922117 -61334466 - L2 LINE L2 -401 2913 2730 1452 201 24 17 chr2 191922117 191922406 -61334177 - AluJo SINE Alu -21 291 1 342 370 84 30 chr2 191922406 191922615 -61333968 - L2 LINE L2 -584 2730 2487 1283 155 53 90 chr2 191924923 191925246 -61331337 - L1MA10 LINE L1 0 6334 6024 5788 71 27 4 chr2 191925364 191926143 -61330440 - L1PA7 LINE L1 0 6154 5358 315 0 0 0 chr2 191926679 191926714 -61329869 + (CATCT)n Simple_repeat Simple_repeat 5 39 0 253 255 10 78 chr2 191926731 191926833 -61329750 + MIR SINE MIR 156 250 -12 33 25 0 0 chr2 191929328 191929368 -61327215 + AT_rich Low_complexity Low_complexity 1 40 0 1355 211 181 2 chr2 191931502 191931923 -61324660 + LTR54B LTR ERV1 1 496 -2 825 246 34 0 chr2 191932587 191932794 -61323789 + MER58C DNA MER1_type 1 214 -1 5629 91 33 45 chr2 191933019 191933965 -61322618 - L1MA3 LINE L1 -5 6300 5367 978 187 5 10 chr2 191933961 191934159 -61322424 + L1 LINE L1 3783 3979 -2167 * 2450 110 16 14 chr2 191934157 191934626 -61321957 - L1 LINE L1 -3812 3753 3284 11282 166 28 13 chr2 191934629 191936538 -61320045 - L1 LINE L1 -5620 1945 8 308 88 18 0 chr2 191937001 191937058 -61319525 + (TA)n Simple_repeat Simple_repeat 2 59 0 258 241 121 0 chr2 191939690 191939748 -61316835 - MER2 DNA MER2_type -1 344 280 786 160 171 11 chr2 191939775 191939956 -61316627 - MER2 DNA MER2_type -134 211 2 313 284 136 32 chr2 191940132 191940287 -61316296 - MIR SINE MIR -66 196 26 21 36 0 0 chr2 191940914 191940942 -61315641 + AT_rich Low_complexity Low_complexity 1 28 0 394 191 150 67 chr2 191941305 191941570 -61315013 + MER102a DNA MER1_type 36 327 -3 365 153 0 14 chr2 191942087 191942159 -61314424 + MER53 DNA DNA 1 71 -118 1128 170 71 0 chr2 191942159 191942371 -61314212 + MER46B DNA MER2_type 1 102 -134 679 171 8 0 chr2 191942371 191942488 -61314095 + L1PA10 LINE L1 4521 4638 -1508 231 114 0 0 chr2 191942488 191942523 -61314060 + (CCCCCT)n Simple_repeat Simple_repeat 5 39 0 9314 73 11 83 chr2 191942527 191944001 -61312582 + SVA Other Other 2 1369 -17 289 93 37 0 chr2 191944004 191944058 -61312525 + (TAAA)n Simple_repeat Simple_repeat 1 56 0 1502 172 41 31 chr2 191944154 191944445 -61312138 - AluJo SINE Alu -16 296 3 6177 93 12 14 chr2 191944686 191946250 -61310333 + L1PA10 LINE L1 4623 6165 -3 337 138 92 0 chr2 191946288 191946353 -61310230 + MER46B DNA MER2_type 92 162 -74 5993 140 41 22 chr2 191946384 191947816 -61308767 - L1 LINE L1 -3455 4110 2636 5505 123 18 11 chr2 191947846 191948759 -61307824 - L1PB2 LINE L1 -9 6142 5223 2018 169 45 30 chr2 191948846 191949387 -61307196 + MLT2A2 LTR ERVL 1 554 0 502 274 78 22 chr2 191949450 191949629 -61306954 - MIR SINE MIR -19 243 55 2268 150 68 5 chr2 191951061 191951461 -61305122 - MSTC LTR MaLR -3 425 1 377 282 42 17 chr2 191951713 191951864 -61304719 - MIR3 SINE MIR -63 145 1 303 322 99 0 chr2 191951864 191952015 -61304568 + MIR SINE MIR 94 259 -3 24 53 0 0 chr2 191952341 191952379 -61304204 + AT_rich Low_complexity Low_complexity 1 38 0 22 70 0 0 chr2 191952937 191952980 -61303603 + AT_rich Low_complexity Low_complexity 1 43 0 188 306 182 33 chr2 191953075 191953196 -61303387 - L2 LINE L2 0 3272 3134 422 264 77 39 chr2 191953910 191954092 -61302491 - L1ME LINE L1 -481 5640 5452 325 212 0 61 chr2 191954578 191954677 -61301906 - LTR33A LTR ERVL -19 504 412 419 211 86 23 chr2 191955683 191955811 -61300772 - MER103 DNA DNA -2 164 29 2931 88 17 14 chr2 191955843 191956265 -61300318 - L1PA7 LINE L1 -1 6153 5731 763 237 41 57 chr2 191956445 191956761 -61299822 - L1M4c LINE L1 -4896 2063 1753 2067 265 96 48 chr2 191956778 191957549 -61299034 - L1M4c LINE L1 -6041 818 11 1324 224 84 15 chr2 191957553 191957945 -61298638 - Charlie4a DNA MER1_type -65 443 25 2274 96 0 0 chr2 191958575 191958866 -61297717 + AluSg SINE Alu 1 291 -19 246 295 213 66 chr2 191959096 191959279 -61297304 + L3b LINE CR1 1340 1549 -34 24 32 0 0 chr2 191960791 191960822 -61295761 + AT_rich Low_complexity Low_complexity 1 31 0 414 300 54 15 chr2 191961164 191961294 -61295289 - L2 LINE L2 -15 3257 3123 2069 178 3 3 chr2 191961501 191961855 -61294728 + MLT1A1 LTR MaLR 10 363 -2 2740 170 22 6 chr2 191962715 191963257 -61293326 - L1MA4 LINE L1 -1 6481 5931 2789 185 53 20 chr2 191963272 191964189 -61292394 - L1ME3A LINE L1 -34 6136 5160 713 132 0 0 chr2 191964190 191964296 -61292287 - AluSg/x SINE Alu -15 297 192 12502 182 32 11 chr2 191964302 191966967 -61289616 - L1MA4 LINE L1 -978 5350 2631 6601 191 70 14 chr2 191966999 191968593 -61287990 - L1MA4 LINE L1 -3806 2522 742 2253 123 0 0 chr2 191968593 191968902 -61287681 - AluSx SINE Alu -2 310 2 6601 191 70 14 chr2 191968902 191969685 -61286898 - L1MA4 LINE L1 -5586 742 4 275 292 164 32 chr2 191969853 191970103 -61286480 + L3 LINE CR1 668 950 -627 192 306 118 0 chr2 191970093 191970178 -61286405 + MIR SINE MIR 37 131 -77 * 189 293 81 50 chr2 191970206 191970305 -61286278 - L2 LINE L2 -25 3288 3187 339 314 24 32 chr2 191970567 191970815 -61285768 - L1MEd LINE L1 -4886 1233 988 1821 80 287 203 chr2 191971370 191971907 -61284676 - LTR12 LTR ERV1 0 714 1 4667 86 3 14 chr2 191971907 191972558 -61284025 - HERV9 LTR ERV1 0 8399 7756 2321 189 106 54 chr2 191972552 191973389 -61283194 - HERV9 LTR ERV1 -5176 1720 840 * 1255 140 5 14 chr2 191973356 191973577 -61283006 - HERV9 LTR ERV1 -3425 4974 4756 * 20263 104 20 6 chr2 191973576 191976467 -61280116 - HERV9 LTR ERV1 -5427 2972 40 4341 92 209 0 chr2 191976480 191977163 -61279420 - LTR12 LTR ERV1 0 826 1 36 23 0 0 chr2 191977742 191977785 -61278798 + AT_rich Low_complexity Low_complexity 1 43 0 301 191 0 48 chr2 191978115 191978178 -61278405 - MER8 DNA MER2_type 0 239 180 2703 137 31 2 chr2 191978189 191978612 -61277971 + Tigger2 DNA MER2_type 2284 2718 0 198 333 14 14 chr2 191979552 191979624 -61276959 - L2 LINE L2 0 3313 3242 215 326 7 85 chr2 191979913 191980054 -61276529 + MIR SINE MIR 68 197 -65 488 312 84 19 chr2 191980104 191980319 -61276264 + MIR SINE MIR 14 242 -20 335 270 63 32 chr2 191980353 191980479 -61276104 - MIR SINE MIR -108 154 25 2956 267 96 35 chr2 191981988 191983311 -61273272 + L2 LINE L2 1920 3299 -14 225 65 0 0 chr2 191983314 191983345 -61273238 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 637 212 95 163 chr2 191984199 191984788 -61271795 + MLT1H LTR MaLR 1 549 0 391 287 169 46 chr2 191987521 191987887 -61268696 + L1MC4a LINE L1 4296 4706 -1440 909 315 86 14 chr2 191987895 191988905 -61267678 + L1MC4a LINE L1 4795 5392 -754 1398 239 106 47 chr2 191988925 191989461 -61267122 + MLT1F1 LTR MaLR 1 567 0 2463 133 67 44 chr2 191990363 191990838 -61265745 + L1PB3 LINE L1 5669 6154 0 21 36 0 0 chr2 191992328 191992356 -61264227 + AT_rich Low_complexity Low_complexity 1 28 0 2270 115 75 0 chr2 191992475 191992824 -61263759 + THE1C LTR MaLR 1 375 0 2284 160 49 2 chr2 191992901 191993308 -61263275 + MSTA LTR MaLR 3 428 0 3639 40 0 2 chr2 191993905 191994354 -61262229 + LTR7 LTR ERV1 1 448 -2 25 0 0 0 chr2 191996320 191996345 -61260238 + AT_rich Low_complexity Low_complexity 1 25 0 244 274 89 70 chr2 191996722 191996879 -61259704 + MIR SINE MIR 1 160 -102 1234 188 246 14 chr2 191997092 191997438 -61259145 - MSTB LTR MaLR 0 426 1 4397 210 84 46 chr2 191997876 192000278 -61256305 - L1ME1 LINE L1 -9 6157 3668 181 367 0 25 chr2 192001369 192001448 -61255135 - L2 LINE L2 -189 3083 3007 210 171 0 0 chr2 192004801 192004836 -61251747 + T-rich Low_complexity Low_complexity 1 35 0 707 157 41 0 chr2 192004867 192004988 -61251595 - FLAM_A SINE Alu -7 126 1 183 273 333 0 chr2 192005178 192005310 -61251273 + MIR SINE MIR 39 214 -48 476 296 113 65 chr2 192005583 192006059 -61250524 - LTR67 LTR ERVL 0 557 59 1481 202 180 31 chr2 192006274 192006725 -61249858 + MLT2B1 LTR ERVL 3 520 0 376 281 22 22 chr2 192007074 192007213 -61249370 - L1MC4a LINE L1 -1893 5915 5777 12023 115 12 29 chr2 192007246 192009805 -61246778 + L1P3 LINE L1 10 2543 -3918 2254 91 0 3 chr2 192009805 192010125 -61246458 - pTR5 LTR ERV1 -2054 384 66 370 235 10 0 chr2 192010125 192010223 -61246360 - LTR30 LTR ERV1 -80 642 544 4029 134 106 62 chr2 192010223 192011203 -61245380 - pTR5 LTR ERV1 -413 2025 743 20820 101 2 1 chr2 192011203 192015120 -61241463 + L1PA7 LINE L1 2215 6139 -15 352 75 65 21 chr2 192015147 192015240 -61241343 + (TA)n Simple_repeat Simple_repeat 2 98 0 801 116 0 0 chr2 192015246 192015358 -61241225 + L1P LINE L1 3620 3731 -2415 1164 124 18 32 chr2 192015556 192015774 -61240809 - LTR23 LTR ERV1 0 437 223 21 0 0 0 chr2 192016386 192016407 -61240176 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr2 192016457 192016480 -61240103 + (T)n Simple_repeat Simple_repeat 1 23 0 23 0 0 0 chr2 192016917 192016940 -61239643 + AT_rich Low_complexity Low_complexity 1 23 0 473 224 61 41 chr2 192021863 192022010 -61234573 - L1ME3A LINE L1 -36 6134 5985 321 351 45 47 chr2 192022487 192022846 -61233737 + L2 LINE L2 1460 1817 -1497 539 178 85 16 chr2 192023161 192023290 -61233293 - L2 LINE L2 -468 2846 2709 714 172 78 0 chr2 192023312 192023440 -61233143 - FRAM SINE Alu -38 138 1 1872 289 56 27 chr2 192023440 192024150 -61232433 - L2 LINE L2 -594 2720 1990 2066 138 18 44 chr2 192024303 192024688 -61231895 - THE1C LTR MaLR 0 375 1 770 200 60 175 chr2 192024844 192025279 -61231304 - MLT2C1 LTR ERVL 0 397 13 1718 208 59 14 chr2 192025350 192025721 -61230862 - MSTD LTR MaLR 0 396 9 21 36 0 0 chr2 192025740 192025768 -61230815 + AT_rich Low_complexity Low_complexity 1 28 0 317 301 150 55 chr2 192026034 192027527 -61229056 + L1MEd LINE L1 11 1726 -4584 22 0 0 0 chr2 192027543 192027565 -61229018 + AT_rich Low_complexity Low_complexity 1 22 0 379 335 29 33 chr2 192027835 192028110 -61228473 + L1MEd LINE L1 2100 2373 -3756 312 297 65 19 chr2 192028125 192028448 -61228135 + L1MEd LINE L1 2420 2757 -3372 473 264 48 8 chr2 192028783 192028908 -61227675 + Charlie1 DNA MER1_type 1 130 -2631 1931 195 122 26 chr2 192028913 192029519 -61227064 + Charlie1 DNA MER1_type 2098 2761 0 23 68 0 0 chr2 192029573 192029617 -61226966 + AT_rich Low_complexity Low_complexity 1 44 0 2236 36 0 0 chr2 192030138 192030391 -61226192 - AluY SINE Alu -58 253 1 501 383 41 42 chr2 192030483 192031146 -61225437 - L2 LINE L2 -81 3232 2565 329 348 22 15 chr2 192034073 192034208 -61222375 + MLT1K LTR MaLR 224 359 -229 2178 115 50 31 chr2 192034914 192035271 -61221312 + THE1B LTR MaLR 1 364 0 11228 102 19 1 chr2 192035271 192036822 -61219761 + THE1B-int LTR MaLR 1 1580 0 2046 123 50 31 chr2 192036822 192037179 -61219404 + THE1B LTR MaLR 1 364 0 509 96 0 72 chr2 192037184 192037267 -61219316 - AluSc SINE Alu -15 294 218 1158 90 6 2 chr2 192037268 192037450 -61219133 - L1P4 LINE L1 -386 5782 5603 1051 160 0 0 chr2 192037604 192037791 -61218792 - L1MA3 LINE L1 -2 6303 6117 201 286 0 0 chr2 192037822 192037864 -61218719 + L2 LINE L2 3136 3177 -95 4719 78 16 2 chr2 192038650 192039292 -61217291 + L1PA13 LINE L1 5513 6163 0 403 316 102 12 chr2 192040833 192041089 -61215494 + L2 LINE L2 1530 1808 -1506 482 325 78 13 chr2 192041461 192041692 -61214891 + MIR SINE MIR 10 255 -7 892 300 111 24 chr2 192042999 192043422 -61213161 - MLT1J LTR MaLR -51 460 1 2218 253 38 32 chr2 192044468 192045206 -61211377 - L1ME1 LINE L1 -61 6174 5433 312 196 0 2 chr2 192045206 192045273 -61211310 - MLT1D LTR MaLR 0 505 448 351 87 0 0 chr2 192045403 192045449 -61211134 - MSTA LTR MaLR 0 428 383 1899 121 3 62 chr2 192045449 192045756 -61210827 + AluSq SINE Alu 1 289 -24 1590 139 198 15 chr2 192045785 192046124 -61210459 - MSTA LTR MaLR -27 401 1 983 222 39 101 chr2 192046125 192046288 -61210295 - MLT1D LTR MaLR -171 334 203 2159 137 0 3 chr2 192046288 192046601 -61209982 + AluSx SINE Alu 1 312 0 983 222 39 101 chr2 192046601 192046793 -61209790 - MLT1D LTR MaLR -302 203 1 598 194 90 9 chr2 192046793 192046982 -61209601 - L1ME1 LINE L1 -808 5407 5227 6580 84 27 6 chr2 192046994 192049457 -61207126 - L1PA8 LINE L1 -3 6169 3567 1833 268 58 9 chr2 192049460 192050150 -61206433 - L1ME1 LINE L1 -981 5234 4511 43768 39 4 2 chr2 192050189 192056324 -61200259 + L1PA3 LINE L1 4 6155 0 1875 144 55 55 chr2 192056431 192056814 -61199769 + MER61D LTR ERV1 114 496 -5 1823 121 0 37 chr2 192056850 192057123 -61199460 + AluY SINE Alu 37 299 -12 243 0 0 0 chr2 192057124 192057151 -61199432 + (TA)n Simple_repeat Simple_repeat 2 28 0 3320 254 77 24 chr2 192057156 192058232 -61198351 - L1ME1 LINE L1 -5176 1220 80 2113 239 53 23 chr2 192058232 192058838 -61197745 + MLT1E3 LTR MaLR 1 624 0 3320 254 77 24 chr2 192058838 192058886 -61197697 - L1ME1 LINE L1 -6316 80 36 1468 202 6 32 chr2 192058963 192059275 -61197308 + AluJo SINE Alu 1 304 -8 1054 201 148 81 chr2 192059328 192059762 -61196821 - MLT1C LTR MaLR 0 467 5 254 348 76 0 chr2 192061092 192061210 -61195373 - MIR SINE MIR -35 227 101 288 253 58 0 chr2 192061593 192061680 -61194903 - MER94 DNA DNA -42 92 1 290 315 83 54 chr2 192061837 192062078 -61194505 - MLT1J1 LTR MaLR -140 306 59 23 0 0 0 chr2 192062479 192062502 -61194081 + AT_rich Low_complexity Low_complexity 1 23 0 196 307 50 40 chr2 192063529 192063630 -61192953 + MER5A DNA MER1_type 63 164 -25 * 398 213 32 32 chr2 192063560 192063654 -61192929 - MER5A DNA MER1_type -83 106 13 21 36 0 0 chr2 192063704 192063732 -61192851 + AT_rich Low_complexity Low_complexity 1 28 0 192 125 36 18 chr2 192065003 192065059 -61191524 + (TA)n Simple_repeat Simple_repeat 1 57 0 1671 178 0 7 chr2 192065080 192065383 -61191200 - AluSx SINE Alu -8 304 4 22 0 0 0 chr2 192066101 192066123 -61190460 + AT_rich Low_complexity Low_complexity 1 22 0 1677 199 12 96 chr2 192066277 192066683 -61189900 + MLT2B2 LTR ERVL 10 381 -134 676 256 39 17 chr2 192066685 192066865 -61189718 + Ricksha DNA DNA 724 907 -2339 349 308 19 9 chr2 192067465 192067572 -61189011 - MIR SINE MIR -87 175 68 1297 167 47 0 chr2 192067665 192067898 -61188685 - Tigger2 DNA MER2_type 0 2718 2475 3543 164 61 33 chr2 192067962 192068686 -61187897 - Tigger2 DNA MER2_type -1974 744 1 332 259 12 0 chr2 192069724 192069809 -61186774 - MER103 DNA DNA -19 147 62 219 69 0 0 chr2 192070308 192070337 -61186246 + (T)n Simple_repeat Simple_repeat 1 29 0 226 373 18 18 chr2 192070490 192070600 -61185983 - MER5B DNA MER1_type -62 116 7 5242 147 53 21 chr2 192075896 192077220 -61179363 - L1MA8 LINE L1 -2 6289 4930 542 274 40 11 chr2 192077314 192077489 -61179094 - MER63 DNA MER1_type -142 918 739 249 200 29 14 chr2 192077492 192077562 -61179021 + MER63 DNA MER1_type 945 1015 -46 305 165 113 21 chr2 192078236 192078333 -61178250 + LTR67 LTR ERVL 432 537 -20 29103 123 20 57 chr2 192080001 192086392 -61170191 - L1PA7 LINE L1 -7 6147 9 281 330 59 8 chr2 192087189 192087307 -61169276 + MIR3 SINE MIR 84 207 -1 2118 265 38 21 chr2 192087702 192088421 -61168162 + L1MD3 LINE L1 6540 7105 -680 450 243 28 0 chr2 192088422 192088529 -61168054 + MLT1F1 LTR MaLR 1 110 -457 1809 194 9 6 chr2 192088576 192088894 -61167689 - MLT1C LTR MaLR -1 466 148 2240 108 147 21 chr2 192088894 192088922 -61167661 + MSTA LTR MaLR 1 24 -404 2534 102 19 11 chr2 192088922 192089294 -61167289 + THE1C LTR MaLR 1 375 0 2240 108 147 21 chr2 192089294 192089645 -61166938 + MSTA LTR MaLR 24 428 0 747 143 24 65 chr2 192089645 192089804 -61166779 - MLT1C LTR MaLR -314 153 2 2275 211 36 4 chr2 192089805 192090325 -61166258 + L1MD3 LINE L1 7457 7993 -2 24 0 0 0 chr2 192090618 192090642 -61165941 + AT_rich Low_complexity Low_complexity 1 24 0 343 286 225 0 chr2 192090937 192091164 -61165419 + L1ME4a LINE L1 5588 5865 -256 1834 91 0 0 chr2 192091183 192091413 -61165170 - AluSx SINE Alu -28 284 55 252 0 0 0 chr2 192091491 192091519 -61165064 + (TG)n Simple_repeat Simple_repeat 1 28 0 1494 316 56 11 chr2 192092274 192092904 -61163679 + MLT2F LTR ERVL 1 658 -5 268 277 179 0 chr2 192093003 192093115 -61163468 + MIR SINE MIR 129 260 -2 27 73 0 0 chr2 192093119 192093174 -61163409 + AT_rich Low_complexity Low_complexity 1 55 0 309 284 35 71 chr2 192094356 192094497 -61162086 - MER20B DNA MER1_type -28 191 56 21 36 0 0 chr2 192094551 192094579 -61162004 + AT_rich Low_complexity Low_complexity 1 28 0 204 97 0 0 chr2 192096313 192096344 -61160239 + (TGGA)n Simple_repeat Simple_repeat 4 34 0 380 277 92 92 chr2 192096425 192096818 -61159765 + L1MCc LINE L1 25 417 -6006 1273 255 59 40 chr2 192097023 192097883 -61158700 + L1MCc LINE L1 1117 1989 -4891 2168 248 115 30 chr2 192097894 192099382 -61157201 + L1MCc LINE L1 3048 4883 -2058 38 22 0 0 chr2 192100086 192100131 -61156452 + AT_rich Low_complexity Low_complexity 1 45 0 5328 32 3 11 chr2 192100261 192100908 -61155675 - L1PA4 LINE L1 0 6155 5514 252 86 0 0 chr2 192102104 192102139 -61154444 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 185 321 25 25 chr2 192103258 192103339 -61153244 - L2 LINE L2 -223 3049 2969 2256 112 0 6 chr2 192103630 192103942 -61152641 + AluSx SINE Alu 1 310 -2 465 332 54 10 chr2 192103977 192104182 -61152401 - L2 LINE L2 -829 2485 2272 511 326 86 9 chr2 192104245 192104466 -61152117 - MIR SINE MIR -18 244 7 22 0 0 0 chr2 192104466 192104488 -61152095 + AT_rich Low_complexity Low_complexity 1 22 0 412 238 73 18 chr2 192105030 192105170 -61151413 - MIR3 SINE MIR -31 177 29 2048 95 10 23 chr2 192106133 192106437 -61150146 - AluSp SINE Alu -13 300 1 663 308 86 28 chr2 192106445 192106945 -61149638 - L1MC/D LINE L1 -1990 5818 5290 234 0 0 0 chr2 192107239 192107265 -61149318 + (T)n Simple_repeat Simple_repeat 1 26 0 538 225 178 39 chr2 192110052 192110215 -61146368 - LTR50 LTR ERVL 0 795 589 1914 260 54 24 chr2 192110215 192110789 -61145794 + MLT1E LTR MaLR 1 591 -2 538 225 178 39 chr2 192110789 192110856 -61145727 - LTR50 LTR ERVL -206 589 533 370 299 58 20 chr2 192111023 192111218 -61145365 - LTR41 LTR ERVL -581 214 1 498 108 0 0 chr2 192112035 192112109 -61144474 + (TA)n Simple_repeat Simple_repeat 1 74 0 402 349 40 11 chr2 192112423 192112598 -61143985 - MLT1K LTR MaLR -277 311 132 318 274 103 32 chr2 192113049 192113394 -61143189 - MLT1K LTR MaLR -2 586 192 583 360 53 15 chr2 192114230 192114641 -61141942 - MLT1J LTR MaLR -30 481 55 229 174 0 58 chr2 192115720 192115789 -61140794 - L1ME4a LINE L1 -41 6080 6016 226 294 33 11 chr2 192115818 192115910 -61140673 - MLT1J LTR MaLR -61 450 357 33 0 0 0 chr2 192116028 192116061 -61140522 + AT_rich Low_complexity Low_complexity 1 33 0 365 214 107 80 chr2 192116343 192116567 -61140016 + L1ME4a LINE L1 5891 6120 -1 440 264 39 13 chr2 192117596 192117620 -61138963 - L1MA10 LINE L1 -9 6325 6302 1816 233 54 35 chr2 192117620 192118161 -61138422 - L1ME1 LINE L1 -23 6143 5593 1168 181 31 105 chr2 192118158 192118369 -61138214 + L1ME LINE L1 5091 5316 -850 * 1746 177 10 3 chr2 192118369 192118674 -61137909 - AluJo SINE Alu -5 307 1 1168 181 31 105 chr2 192118674 192119023 -61137560 + L1ME LINE L1 5316 5610 -556 23 0 0 0 chr2 192119027 192119050 -61137533 + AT_rich Low_complexity Low_complexity 1 23 0 28 0 0 0 chr2 192119201 192119229 -61137354 + AT_rich Low_complexity Low_complexity 1 28 0 302 330 84 54 chr2 192119879 192120285 -61136298 + L2 LINE L2 1835 2252 -1062 * 325 247 59 0 chr2 192120280 192120365 -61136218 - MIR SINE MIR -4 258 169 217 306 117 18 chr2 192120916 192121027 -61135556 + L2 LINE L2 2554 2675 -639 3037 254 71 28 chr2 192121728 192122165 -61134418 + L1ME2 LINE L1 3732 4149 -1997 2726 76 3 3 chr2 192122165 192122520 -61134063 + THE1A LTR MaLR 1 355 0 3037 254 71 28 chr2 192122520 192123381 -61133202 + L1ME2 LINE L1 4149 5086 -1060 1353 147 5 5 chr2 192123381 192123592 -61132991 - AluSp SINE Alu -15 298 88 682 303 94 18 chr2 192123752 192124240 -61132343 + L1MA4 LINE L1 5327 5851 -449 * 2533 256 45 5 chr2 192123802 192124541 -61132042 + L1ME2 LINE L1 5390 6157 -7 1733 264 79 84 chr2 192124541 192124989 -61131594 + L1MC5 LINE L1 5422 5871 -2090 2356 132 5 16 chr2 192124989 192125368 -61131215 - THE1C LTR MaLR 0 375 1 1733 264 79 84 chr2 192125368 192126543 -61130040 + L1MC5 LINE L1 5871 7128 -833 821 129 0 0 chr2 192126543 192126675 -61129908 + L1MA5A LINE L1 6165 6296 -1 1733 264 79 84 chr2 192126675 192127441 -61129142 + L1MC5 LINE L1 7128 7896 -65 779 221 173 11 chr2 192127756 192128028 -61128555 - MER33 DNA MER1_type -1 323 8 231 304 88 48 chr2 192128129 192128222 -61128361 + L2 LINE L2 2245 2346 -968 2146 147 28 0 chr2 192128222 192128576 -61128007 - THE1B LTR MaLR 0 364 1 231 304 88 48 chr2 192128576 192128607 -61127976 + L2 LINE L2 2346 2374 -940 830 164 0 0 chr2 192128763 192128891 -61127692 + FLAM_A SINE Alu 6 133 -9 24 0 0 0 chr2 192131128 192131152 -61125431 + AT_rich Low_complexity Low_complexity 1 24 0 482 294 140 29 chr2 192131475 192131646 -61124937 + MER90 LTR ERV1 68 219 -356 1270 214 110 3 chr2 192131646 192131955 -61124628 + MER2 DNA MER2_type 3 344 0 482 294 140 29 chr2 192131955 192132198 -61124385 + MER90 LTR ERV1 219 528 -47 1307 285 67 34 chr2 192132426 192132962 -61123621 + MER68 LTR ERV1 1 554 -8 1856 148 15 12 chr2 192133515 192133845 -61122738 + L1MA2 LINE L1 5965 6295 -9 24 32 0 0 chr2 192134081 192134112 -61122471 + AT_rich Low_complexity Low_complexity 1 31 0 1488 203 46 10 chr2 192134343 192134648 -61121935 + MLT1A1 LTR MaLR 1 316 -49 1479 16 0 38 chr2 192134672 192134857 -61121726 + L1PA2 LINE L1 5972 6149 -6 433 130 29 0 chr2 192134862 192134931 -61121652 + MLT1A1 LTR MaLR 295 365 0 542 294 64 26 chr2 192138069 192138334 -61118249 - L1M4 LINE L1 -3526 2620 2346 25 0 0 0 chr2 192139763 192139788 -61116795 + AT_rich Low_complexity Low_complexity 1 25 0 25 51 0 0 chr2 192141721 192141760 -61114823 + AT_rich Low_complexity Low_complexity 1 39 0 1609 167 52 0 chr2 192142504 192142810 -61113773 - THE1C LTR MaLR 0 375 54 1541 233 99 11 chr2 192142815 192143279 -61113304 + LTR22 LTR ERVK 1 505 -4 302 104 0 42 chr2 192143283 192143331 -61113252 - THE1C LTR MaLR -329 46 1 360 156 64 40 chr2 192143889 192144062 -61112521 + (TA)n Simple_repeat Simple_repeat 2 178 0 189 0 0 0 chr2 192144131 192144152 -61112431 + (CA)n Simple_repeat Simple_repeat 2 22 0 517 320 78 25 chr2 192144224 192144939 -61111644 + L1MEd LINE L1 942 1734 -4576 2248 109 3 0 chr2 192145094 192145397 -61111186 - AluSx SINE Alu -8 304 1 1708 272 64 6 chr2 192145407 192146202 -61110381 - L1ME3 LINE L1 -52 6110 5223 432 72 96 0 chr2 192146205 192146330 -61110253 + (TA)n Simple_repeat Simple_repeat 1 137 0 1697 246 38 38 chr2 192146893 192147389 -61109194 + MLT1D LTR MaLR 3 498 -7 2021 130 44 39 chr2 192147448 192147810 -61108773 - THE1B LTR MaLR 0 364 1 4646 83 0 2 chr2 192148158 192148785 -61107798 + L1PA8 LINE L1 5545 6170 -2 48 53 0 0 chr2 192148842 192148918 -61107665 + AT_rich Low_complexity Low_complexity 1 76 0 22 80 0 0 chr2 192149122 192149172 -61107411 + AT_rich Low_complexity Low_complexity 1 50 0 18281 166 49 27 chr2 192149172 192153620 -61102963 - L1MA2 LINE L1 0 7723 3005 276 86 0 0 chr2 192153620 192153655 -61102928 + U2 snRNA snRNA 1 35 -153 18281 166 49 27 chr2 192153655 192156701 -61099882 - L1MA2 LINE L1 -4718 3005 28 268 220 0 0 chr2 192157352 192157402 -61099181 + Charlie8 DNA MER1_type 1368 1417 -1000 1150 193 20 118 chr2 192157459 192157864 -61098719 - MLT1A1 LTR MaLR 0 365 1 186 103 0 0 chr2 192158487 192158516 -61098067 + (CTA)n Simple_repeat Simple_repeat 2 30 0 546 255 215 10 chr2 192158575 192158775 -61097808 - MIR SINE MIR -7 255 15 197 333 12 48 chr2 192161027 192161111 -61095472 + L2 LINE L2 3231 3311 -2 629 260 44 46 chr2 192161906 192162167 -61094416 + L1M4c LINE L1 2051 2311 -5254 1791 153 7 10 chr2 192162167 192162480 -61094103 - AluSq SINE Alu 0 312 1 629 260 44 46 chr2 192162480 192163724 -61092859 + L1M4c LINE L1 2311 3767 -3798 370 271 76 80 chr2 192163852 192164103 -61092480 - L2 LINE L2 -32 3281 3032 23 78 0 0 chr2 192164164 192164215 -61092368 + AT_rich Low_complexity Low_complexity 1 51 0 27 29 0 0 chr2 192164838 192164872 -61091711 + AT_rich Low_complexity Low_complexity 1 34 0 22 35 0 0 chr2 192164914 192164943 -61091640 + AT_rich Low_complexity Low_complexity 1 29 0 6572 199 55 7 chr2 192166344 192168723 -61087860 + L1PA16 LINE L1 3682 6163 -3 2120 140 7 59 chr2 192168724 192168853 -61087730 + L1PB4 LINE L1 5772 5906 -250 1925 120 7 0 chr2 192168853 192169137 -61087446 + AluSx SINE Alu 1 286 -26 207 0 0 0 chr2 192169137 192169160 -61087423 + (CCA)n Simple_repeat Simple_repeat 1 23 0 2120 140 7 59 chr2 192169160 192169172 -61087411 + L1PB4 LINE L1 5905 5916 -240 279 0 0 0 chr2 192169172 192169203 -61087380 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 2120 140 7 59 chr2 192169203 192169465 -61087118 + L1PB4 LINE L1 5916 6156 0 221 329 14 0 chr2 192169543 192169616 -61086967 - MIR SINE MIR -17 245 172 247 255 38 0 chr2 192169900 192170006 -61086577 + (TA)n Simple_repeat Simple_repeat 2 111 0 2273 78 0 38 chr2 192170036 192170356 -61086227 - AluY SINE Alu -3 308 1 787 123 0 91 chr2 192170422 192170576 -61086007 - L1PA10 LINE L1 -2 6166 6027 24 77 0 0 chr2 192170769 192170821 -61085762 + AT_rich Low_complexity Low_complexity 1 52 0 21 57 0 0 chr2 192171151 192171186 -61085397 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 192172087 192172108 -61084475 + AT_rich Low_complexity Low_complexity 1 21 0 306 0 0 0 chr2 192175456 192175490 -61081093 + (TG)n Simple_repeat Simple_repeat 2 35 0 908 123 80 12 chr2 192175493 192175656 -61080927 - Tigger3(Golem) DNA MER2_type -1 3028 2855 297 340 108 41 chr2 192175846 192176114 -61080469 + L2 LINE L2 2692 2977 -337 185 105 0 26 chr2 192178691 192178729 -61077854 + (GA)n Simple_repeat Simple_repeat 2 38 0 307 227 0 45 chr2 192178820 192178886 -61077697 - LTR8 LTR ERV1 0 691 629 2610 26 3 3 chr2 192181331 192181640 -61074943 + AluYb8 SINE Alu 1 309 -9 204 340 63 25 chr2 192181690 192181849 -61074734 - L2 LINE L2 -1030 2284 2120 32 57 0 0 chr2 192182197 192182250 -61074333 + AT_rich Low_complexity Low_complexity 1 53 0 28 0 0 0 chr2 192182910 192182938 -61073645 + AT_rich Low_complexity Low_complexity 1 28 0 1984 120 0 0 chr2 192183047 192183323 -61073260 - AluSx SINE Alu -36 276 1 252 130 0 0 chr2 192183710 192183756 -61072827 - LTR66 LTR ERVL -171 439 394 252 130 0 0 chr2 192183718 192183764 -61072819 + LTR66 LTR ERVL 394 439 -171 24 67 0 0 chr2 192184209 192184254 -61072329 + AT_rich Low_complexity Low_complexity 1 45 0 16876 175 52 18 chr2 192184271 192184409 -61072174 - L1M1 LINE L1 -4046 3519 3387 1930 145 50 39 chr2 192184409 192184767 -61071816 + THE1B LTR MaLR 1 362 -2 16876 175 52 18 chr2 192184767 192188024 -61068559 - L1M1 LINE L1 -4178 3387 8 1561 127 109 0 chr2 192188339 192188614 -61067969 - AluSx SINE Alu -7 305 1 2325 100 0 0 chr2 192188637 192188947 -61067636 - AluSg SINE Alu 0 310 1 1373 226 132 0 chr2 192188959 192189362 -61067221 - L1MD3 LINE L1 0 7995 7540 1209 241 174 7 chr2 192189360 192189936 -61066647 - L1MC/D LINE L1 -573 5593 4915 * 383 266 27 11 chr2 192189989 192190136 -61066447 - L1ME LINE L1 -439 5682 5533 198 71 0 0 chr2 192190184 192190212 -61066371 + (TTTTTA)n Simple_repeat Simple_repeat 2 29 0 21 0 0 0 chr2 192191736 192191757 -61064826 + AT_rich Low_complexity Low_complexity 1 21 0 449 294 0 53 chr2 192192385 192192572 -61064011 - MER5B DNA MER1_type 0 178 2 189 254 0 63 chr2 192193540 192193603 -61062980 - L2 LINE L2 0 3313 3255 604 360 20 16 chr2 192193986 192194239 -61062344 - L2 LINE L2 -492 2822 2569 307 312 65 19 chr2 192194240 192194394 -61062189 - MIR SINE MIR -74 188 28 2364 173 28 19 chr2 192195259 192195722 -61060861 + MLT1C LTR MaLR 1 467 0 1760 216 26 10 chr2 192195821 192196209 -61060374 + MSTD LTR MaLR 3 396 0 304 297 40 10 chr2 192196352 192196453 -61060130 + MER103 DNA DNA 20 123 -43 2259 252 112 33 chr2 192196821 192197960 -61058623 + L1M4 LINE L1 3944 5172 -974 1488 227 32 61 chr2 192197999 192198439 -61058144 + L1ME3 LINE L1 498 924 -5618 1598 156 42 0 chr2 192198442 192198731 -61057852 + L1MB7 LINE L1 5859 6159 -25 337 304 31 46 chr2 192198772 192198966 -61057617 + L1ME3 LINE L1 2057 2247 -4578 262 277 125 0 chr2 192198972 192199084 -61057499 + L1ME3 LINE L1 2287 2412 -4413 275 278 113 0 chr2 192199142 192199257 -61057326 + L1ME3 LINE L1 5976 6103 -557 3104 162 49 73 chr2 192199270 192199505 -61057078 - LTR8A LTR ERV1 0 727 488 670 104 9 0 chr2 192199505 192199611 -61056972 + L1PB1 LINE L1 6044 6150 -1 3104 162 49 73 chr2 192199611 192199873 -61056710 - LTR8A LTR ERV1 -239 488 250 3237 148 11 21 chr2 192199873 192200405 -61056178 + MER1A DNA MER1_type 1 527 0 3104 162 49 73 chr2 192200405 192200621 -61055962 - LTR8A LTR ERV1 -477 250 30 998 192 86 4 chr2 192200628 192200862 -61055721 + L1ME3 LINE L1 6128 6380 -280 444 173 0 12 chr2 192200866 192200947 -61055636 + MLT1A1 LTR MaLR 1 80 -285 468 318 63 47 chr2 192200949 192201314 -61055269 - HERV16 LTR ERVL -687 5077 4707 481 201 28 117 chr2 192201363 192201542 -61055041 - MER4C LTR ERV1 -26 439 277 1961 122 4 0 chr2 192201585 192201864 -61054719 + AluSx SINE Alu 1 280 -32 355 210 35 15 chr2 192201906 192202030 -61054553 - MER4C LTR ERV1 -261 403 167 * 1869 144 0 84 chr2 192202000 192202381 -61054202 - MER4A LTR ERV1 -315 349 1 309 325 18 24 chr2 192202619 192202788 -61053795 + HERVL LTR ERVL 3343 3510 -2144 487 267 124 0 chr2 192202806 192202967 -61053616 + MER63A DNA MER1_type 1 181 -29 1014 355 31 4 chr2 192203033 192203626 -61052957 - HERV16 LTR ERVL -2021 2975 2657 587 319 85 19 chr2 192203670 192203930 -61052653 - HERV16 LTR ERVL -3162 2602 2326 284 282 27 55 chr2 192204101 192204211 -61052372 - HERV16 LTR ERVL -4166 1598 1492 717 233 35 4 chr2 192204307 192204516 -61052067 + L1MA10 LINE L1 5961 6334 0 272 313 61 61 chr2 192205678 192205825 -61050758 - MIR SINE MIR 0 262 116 305 200 29 0 chr2 192205925 192205995 -61050588 + L1ME3A LINE L1 5217 5288 -858 2021 119 4 0 chr2 192206033 192206311 -61050272 - AluSg SINE Alu -31 279 1 530 255 150 48 chr2 192206454 192206871 -61049712 + L1ME3A LINE L1 5409 5869 -301 1177 289 62 20 chr2 192206918 192207368 -61049215 + L2 LINE L2 1963 2431 -883 556 199 111 80 chr2 192207587 192207983 -61048600 - MLT1D LTR MaLR 0 505 1 250 306 18 9 chr2 192207986 192208097 -61048486 - L1MC4 LINE L1 -770 7272 7161 965 275 75 0 chr2 192208301 192208581 -61048002 - L1MC4a LINE L1 -885 6923 6623 2387 200 52 64 chr2 192208777 192209440 -61047143 + L1MD2 LINE L1 4606 5275 -967 2295 62 0 10 chr2 192209440 192209758 -61046825 + AluY SINE Alu 1 315 0 2387 200 52 64 chr2 192209758 192210393 -61046190 + L1MD2 LINE L1 5275 5916 -326 1767 250 79 47 chr2 192209797 192210912 -61045671 + L1PA5 LINE L1 5320 6154 0 2016 94 7 65 chr2 192210393 192210700 -61045883 - AluSq SINE Alu -24 289 1 2387 200 52 64 chr2 192210700 192210735 -61045848 + L1MD2 LINE L1 5916 5950 -292 1473 28 11 0 chr2 192210735 192210912 -61045671 + L1PA4 LINE L1 5977 6155 0 2387 200 52 64 chr2 192210912 192211064 -61045519 + L1MD2 LINE L1 5950 6056 -186 207 0 0 0 chr2 192211064 192211087 -61045496 + (CA)n Simple_repeat Simple_repeat 2 24 0 2387 200 52 64 chr2 192211087 192211262 -61045321 + L1MD2 LINE L1 6056 6232 -10 976 274 128 28 chr2 192211688 192211781 -61044802 - L1MC4a LINE L1 -1905 5903 5821 1894 150 36 6 chr2 192211781 192212140 -61044443 - L1PA16 LINE L1 0 6166 5797 976 274 128 28 chr2 192212140 192212616 -61043967 - L1MC4a LINE L1 -1987 5821 5277 182 160 64 11 chr2 192212698 192212792 -61043791 + (TA)n Simple_repeat Simple_repeat 2 100 0 1545 209 3 7 chr2 192212987 192213284 -61043299 - AluJo SINE Alu -16 296 1 245 325 9 9 chr2 192213285 192213399 -61043184 - L1MC4a LINE L1 -1125 5021 4908 1635 168 0 72 chr2 192213616 192213950 -61042633 + AluJo SINE Alu 1 310 -2 362 169 34 56 chr2 192214243 192214332 -61042251 + L2 LINE L2 3227 3313 0 368 176 122 0 chr2 192214588 192214662 -61041921 + MER45A DNA AcHobo 49 131 -47 4098 32 8 0 chr2 192216722 192217214 -61039369 - L1PA3 LINE L1 -1909 4237 3742 9500 29 6 8 chr2 192217214 192219126 -61037457 + L1PA3 LINE L1 4243 6152 -3 406 330 113 6 chr2 192219174 192219373 -61037210 + MIR SINE MIR 34 252 -10 569 293 53 45 chr2 192220738 192220984 -61035599 - MIR SINE MIR -9 253 6 448 291 140 31 chr2 192222127 192222484 -61034099 + L1MC4a LINE L1 5510 5905 -1903 2236 54 0 14 chr2 192222635 192222915 -61033668 - AluY SINE Alu 0 311 36 268 299 103 0 chr2 192223190 192223297 -61033286 + LTR67 LTR ERVL 428 545 -12 282 253 93 0 chr2 192223960 192224035 -61032548 - L2 LINE L2 -3 3310 3229 490 178 0 28 chr2 192224699 192224806 -61031777 + MLT1A1 LTR MaLR 3 106 -259 249 33 0 0 chr2 192225120 192225150 -61031433 + (A)n Simple_repeat Simple_repeat 1 30 0 716 179 0 8 chr2 192225894 192226011 -61030572 - FLAM_C SINE Alu -27 116 1 540 300 38 0 chr2 192227874 192228034 -61028549 + MER5B DNA MER1_type 8 173 -5 521 163 107 107 chr2 192228053 192228231 -61028352 + MER5B DNA MER1_type 1 178 0 276 266 0 37 chr2 192229679 192229760 -61026823 - MLT1I LTR MaLR -263 175 84 1800 159 27 7 chr2 192229808 192230109 -61026474 - AluJo SINE Alu 0 312 6 862 308 20 4 chr2 192230281 192230534 -61026049 + MIR SINE MIR 1 257 -5 228 86 0 0 chr2 192230755 192230790 -61025793 + (A)n Simple_repeat Simple_repeat 1 35 0 204 211 39 19 chr2 192230876 192230928 -61025655 - MIR SINE MIR -18 244 192 235 122 204 0 chr2 192230929 192230978 -61025605 - MADE1 DNA Mariner 0 80 22 208 299 15 15 chr2 192230978 192231045 -61025538 - MIR SINE MIR -79 183 117 6817 171 33 9 chr2 192231109 192233525 -61023058 + L1PB2 LINE L1 3673 6143 -8 255 375 62 0 chr2 192233894 192234006 -61022577 - MIR3 SINE MIR -52 156 38 401 232 84 0 chr2 192234180 192234275 -61022308 - MER91C DNA MER1_type 0 140 38 21 71 0 0 chr2 192236130 192236172 -61020411 + AT_rich Low_complexity Low_complexity 1 42 0 295 253 20 0 chr2 192236926 192237025 -61019558 + (TA)n Simple_repeat Simple_repeat 2 102 0 2007 120 22 155 chr2 192237179 192237670 -61018913 - MSTA LTR MaLR -2 426 1 24 0 0 0 chr2 192237999 192238023 -61018560 + AT_rich Low_complexity Low_complexity 1 24 0 259 312 121 17 chr2 192239149 192239322 -61017261 + MIR3 SINE MIR 16 206 -2 12949 139 54 15 chr2 192240695 192243016 -61013567 - Tigger1 DNA MER2_type -4 2414 2 239 348 95 6 chr2 192243499 192243657 -61012926 - MIR SINE MIR -84 178 7 * 348 232 184 16 chr2 192243653 192243778 -61012805 - L3 LINE CR1 -190 1387 1242 369 0 0 0 chr2 192244914 192244955 -61011628 + (CA)n Simple_repeat Simple_repeat 1 41 0 704 226 21 58 chr2 192245523 192245713 -61010870 + MER5A DNA MER1_type 7 189 0 384 264 0 23 chr2 192245769 192245856 -61010727 - MER5A DNA MER1_type -93 96 12 * 511 262 9 0 chr2 192245854 192245961 -61010622 - MER5B DNA MER1_type -6 172 65 906 209 71 9 chr2 192246592 192246803 -61009780 + L1MB7 LINE L1 1 224 -6635 2248 217 45 2 chr2 192246803 192247355 -61009228 + L1MB7 LINE L1 4162 4737 -2220 857 256 92 3 chr2 192247501 192247642 -61008941 + L1MB7 LINE L1 5636 5763 -1194 1844 183 28 11 chr2 192247642 192247997 -61008586 - MLT1A1 LTR MaLR 0 365 5 857 256 92 3 chr2 192247997 192248160 -61008423 + L1MB7 LINE L1 5763 5967 -990 2733 196 85 42 chr2 192248163 192248455 -61008128 + L1MB7 LINE L1 6095 6373 -622 2087 88 3 62 chr2 192248455 192248775 -61007808 + AluY SINE Alu 1 301 -10 2733 196 85 42 chr2 192248775 192248801 -61007782 + L1MB7 LINE L1 6373 6396 -599 2349 107 19 25 chr2 192248801 192249167 -61007416 + THE1B LTR MaLR 1 364 0 2733 196 85 42 chr2 192249167 192249691 -61006892 + L1MB7 LINE L1 6396 6975 -20 22 0 0 0 chr2 192249696 192249718 -61006865 + AT_rich Low_complexity Low_complexity 1 22 0 438 20 0 0 chr2 192250462 192250513 -61006070 + (CA)n Simple_repeat Simple_repeat 2 52 0 626 266 56 93 chr2 192250514 192250837 -61005746 + L1MC/D LINE L1 5452 5762 -2046 10081 80 6 12 chr2 192250859 192253039 -61003544 - L1PA7 LINE L1 -6 6148 3969 4895 174 51 7 chr2 192253047 192253996 -61002587 - L1PA16 LINE L1 0 6166 5260 802 103 95 0 chr2 192253996 192254122 -61002461 - MER85 DNA T2_type -1 138 1 4895 174 51 7 chr2 192254122 192254859 -61001724 - L1PA16 LINE L1 -906 5260 4390 207 0 0 0 chr2 192254859 192254882 -61001701 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 4895 174 51 7 chr2 192254882 192255048 -61001535 - L1PA16 LINE L1 -1776 4390 4233 2710 141 18 11 chr2 192255055 192255502 -61001081 - L1PA15 LINE L1 -1 6164 5715 1495 207 21 9 chr2 192255502 192255830 -61000753 + L1P LINE L1 3607 3938 -2208 2802 214 7 2 chr2 192255844 192256414 -61000169 - L1PA16 LINE L1 -1903 4243 3671 23 0 0 0 chr2 192256420 192256443 -61000140 + AT_rich Low_complexity Low_complexity 1 23 0 1799 159 47 3 chr2 192256486 192256782 -60999801 + AluSx SINE Alu 3 311 -1 585 60 0 12 chr2 192256789 192256896 -60999687 + L1PA4 LINE L1 6072 6155 0 1566 173 70 28 chr2 192257315 192257673 -60998910 + THE1C LTR MaLR 3 375 0 9008 146 16 34 chr2 192257675 192259282 -60997301 + THE1C-int LTR MaLR 3 1580 0 1674 162 63 39 chr2 192259282 192259646 -60996937 + THE1C LTR MaLR 1 373 -2 564 192 6 28 chr2 192259818 192259984 -60996599 + (TA)n Simple_repeat Simple_repeat 1 164 -9 204 40 0 0 chr2 192259984 192260009 -60996574 + (TG)n Simple_repeat Simple_repeat 2 26 0 564 192 6 28 chr2 192260009 192260019 -60996564 + (TA)n Simple_repeat Simple_repeat 164 173 0 522 357 161 22 chr2 192260290 192261155 -60995428 - L2 LINE L2 -227 3045 2066 273 270 145 57 chr2 192261157 192261316 -60995267 - L2 LINE L2 -1365 1949 1777 443 270 94 13 chr2 192261482 192261641 -60994942 - MIR SINE MIR -71 191 20 23 0 0 0 chr2 192263278 192263301 -60993282 + AT_rich Low_complexity Low_complexity 1 23 0 32 43 0 0 chr2 192264232 192264278 -60992305 + AT_rich Low_complexity Low_complexity 1 46 0 13808 85 1 2 chr2 192264415 192266256 -60990327 + L1P LINE L1 3 1842 -4304 2635 123 19 7 chr2 192266267 192266561 -60990022 - L1M2 LINE L1 -512 5788 5486 1968 146 7 13 chr2 192266561 192266870 -60989713 - AluSx SINE Alu -5 307 1 2635 123 19 7 chr2 192266870 192267007 -60989576 - L1M2 LINE L1 -814 5486 5352 5721 135 46 35 chr2 192267011 192269102 -60987481 - SVA Other Other -518 1386 91 27378 46 8 2 chr2 192269102 192273370 -60983213 + L1PA5 LINE L1 1890 6181 0 1541 226 31 14 chr2 192273409 192273768 -60982815 + MLT1A1 LTR MaLR 1 365 0 409 280 35 94 chr2 192273780 192274066 -60982517 + L1M4 LINE L1 2890 3158 -2988 2363 181 27 0 chr2 192274114 192274555 -60982028 - L1PA16 LINE L1 -9 6157 5705 1115 158 30 13 chr2 192274555 192274910 -60981673 - L1PA16 LINE L1 -695 5459 5100 4024 232 49 13 chr2 192274926 192276186 -60980397 - L1M4c LINE L1 -1429 5677 4372 2269 67 0 67 chr2 192276192 192276537 -60980046 + L1PA8A LINE L1 5360 5681 -450 569 263 74 70 chr2 192276528 192277003 -60979580 + L1M1 LINE L1 3004 3480 -4085 * 1552 264 36 38 chr2 192277022 192277742 -60978841 - L1M4c LINE L1 -2972 4134 3416 2345 249 80 45 chr2 192277749 192279225 -60977358 - L1M4c LINE L1 -3940 3168 1851 366 23 0 0 chr2 192279225 192279268 -60977315 + (TG)n Simple_repeat Simple_repeat 1 43 0 2345 249 80 45 chr2 192279268 192279423 -60977160 - L1M4c LINE L1 -5257 1851 1703 1894 286 87 36 chr2 192279423 192280416 -60976167 - L1M4c LINE L1 -5984 1046 4 292 243 58 10 chr2 192280423 192280526 -60976057 - L1M4 LINE L1 -1288 4858 4751 317 272 166 55 chr2 192280643 192280860 -60975723 + L1ME LINE L1 4617 4857 -1289 1719 277 19 13 chr2 192280888 192281365 -60975218 - MER41E LTR ERV1 -10 502 23 494 300 110 46 chr2 192282032 192282226 -60974357 + L1ME LINE L1 5322 5502 -619 2472 194 36 71 chr2 192282226 192282860 -60973723 + LTR9 LTR ERV1 1 612 0 494 300 110 46 chr2 192282860 192283102 -60973481 + L1ME LINE L1 5502 5786 -335 556 314 59 32 chr2 192284453 192284673 -60971910 - MIR SINE MIR -23 239 14 2229 95 0 7 chr2 192284673 192284968 -60971615 - AluSg1 SINE Alu -16 293 1 353 225 0 0 chr2 192285561 192285632 -60970951 - L2 LINE L2 0 3313 3243 878 240 37 32 chr2 192286116 192286333 -60970250 + L1MDb LINE L1 20 237 -6172 1625 117 0 0 chr2 192286336 192286549 -60970034 - AluSx SINE Alu -99 213 1 40 0 0 0 chr2 192286604 192286644 -60969939 + AT_rich Low_complexity Low_complexity 1 40 0 1828 152 37 14 chr2 192287164 192287461 -60969122 + AluJb SINE Alu 1 304 -8 29 98 0 0 chr2 192289040 192289132 -60967451 + AT_rich Low_complexity Low_complexity 1 92 0 2033 121 3 23 chr2 192290425 192290732 -60965851 + AluSx SINE Alu 1 301 -11 692 270 54 29 chr2 192290779 192290983 -60965600 + MER58A DNA MER1_type 3 211 -13 542 290 71 102 chr2 192291725 192292342 -60964241 - MLT2E LTR ERVL -2 626 29 13250 194 32 5 chr2 192292487 192296907 -60959676 - L1PB1 LINE L1 -2 6865 2244 13774 176 30 19 chr2 192296946 192299044 -60957539 + L1MA2 LINE L1 2425 4497 -3226 2310 91 0 7 chr2 192299044 192299342 -60957241 + AluY SINE Alu 1 296 -15 13774 176 30 19 chr2 192299342 192301937 -60954646 + L1MA2 LINE L1 4497 7172 -551 2573 184 11 4 chr2 192301944 192302401 -60954182 + MER66B LTR ERV1 27 486 0 737 142 24 0 chr2 192302401 192302528 -60954055 + L1MA2 LINE L1 7169 7298 -425 667 248 0 13 chr2 192302544 192302693 -60953890 - MER66B LTR ERV1 -339 147 1 2175 151 26 21 chr2 192302720 192302957 -60953626 + L1MA2 LINE L1 7299 7540 -183 2189 93 10 3 chr2 192302957 192303248 -60953335 + AluSc SINE Alu 1 293 -16 2175 151 26 21 chr2 192303248 192303433 -60953150 + L1MA2 LINE L1 7540 7723 0 708 268 97 75 chr2 192303474 192303585 -60952998 - LTR41 LTR ERVL -3 770 663 1700 174 150 5 chr2 192303585 192303959 -60952624 - MSTA LTR MaLR 0 428 1 708 268 97 75 chr2 192303959 192304272 -60952311 - LTR41 LTR ERVL -110 663 337 460 239 22 15 chr2 192304293 192304427 -60952156 - LTR41 LTR ERVL -638 135 1 466 217 0 17 chr2 192304427 192304542 -60952041 + L1ME2 LINE L1 5623 5735 -429 413 222 70 27 chr2 192304545 192304730 -60951853 + L1ME2 LINE L1 5787 5979 -185 23 33 0 0 chr2 192307661 192307691 -60948892 + AT_rich Low_complexity Low_complexity 1 30 0 1395 171 49 43 chr2 192308397 192308701 -60947882 + AluJo SINE Alu 1 306 -6 1322 213 135 75 chr2 192309509 192310147 -60946436 + MER109 Unknown Unknown 551 1226 -1206 1289 247 77 29 chr2 192310251 192310969 -60945614 + MER109 Unknown Unknown 1 792 -1640 4955 167 33 15 chr2 192311036 192311852 -60944731 - L1MA8 LINE L1 -47 6244 5397 1578 157 83 113 chr2 192311852 192312260 -60944323 - MSTD LTR MaLR 0 396 1 4955 167 33 15 chr2 192312260 192312585 -60943998 - L1MA8 LINE L1 -894 5397 5080 4087 203 81 34 chr2 192312940 192314434 -60942149 + MER52A LTR ERV1 3 1755 0 7257 162 24 3 chr2 192314948 192317318 -60939265 + L1PBa LINE L1 6 2639 -4224 11041 126 12 60 chr2 192317327 192319978 -60936605 + L1PA7 LINE L1 12 2789 -3365 299 0 73 0 chr2 192319978 192320019 -60936564 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 11041 126 12 60 chr2 192320019 192323750 -60932833 + L1PA7 LINE L1 2789 6154 0 6155 201 38 5 chr2 192323753 192325288 -60931295 + L1PBa LINE L1 2629 4215 -2647 41549 56 25 5 chr2 192325296 192331317 -60925266 + L1PA7 LINE L1 1 6148 -6 642 282 46 84 chr2 192331339 192331662 -60924921 - L1MC/D LINE L1 -2046 5762 5452 438 20 0 0 chr2 192331663 192331714 -60924869 + (TG)n Simple_repeat Simple_repeat 2 52 0 22 0 0 0 chr2 192332458 192332480 -60924103 + AT_rich Low_complexity Low_complexity 1 22 0 2859 196 85 41 chr2 192332482 192333009 -60923574 - L1MB7 LINE L1 -17 6167 5664 2534 107 19 25 chr2 192333009 192333375 -60923208 - THE1B LTR MaLR 0 364 1 2859 196 85 41 chr2 192333375 192333401 -60923182 - L1MB7 LINE L1 -520 5664 5641 2196 83 3 45 chr2 192333401 192333715 -60922868 - AluY SINE Alu -10 301 1 2859 196 85 41 chr2 192333715 192334007 -60922576 - L1MB7 LINE L1 -543 5641 5284 1890 217 68 6 chr2 192334010 192334174 -60922409 - L1MB7 LINE L1 -990 5156 5004 1998 186 28 11 chr2 192334174 192334529 -60922054 + MLT1A1 LTR MaLR 5 365 0 1890 217 68 6 chr2 192334529 192334867 -60921716 - L1MB7 LINE L1 -1142 5004 4623 1428 234 153 59 chr2 192335248 192336175 -60920408 + MER109 Unknown Unknown 479 1226 -1206 1371 247 77 29 chr2 192336279 192336997 -60919586 + MER109 Unknown Unknown 1 792 -1640 4467 194 30 14 chr2 192337064 192337882 -60918701 - L1MA8 LINE L1 -47 6244 5398 1552 159 83 113 chr2 192337882 192338290 -60918293 - MSTD LTR MaLR 0 396 1 4467 194 30 14 chr2 192338290 192338615 -60917968 - L1MA8 LINE L1 -893 5398 5080 4199 203 78 34 chr2 192338970 192340468 -60916115 + MER52A LTR ERV1 3 1755 0 7268 161 24 3 chr2 192340982 192343353 -60913230 + L1PB1 LINE L1 6 2639 -4224 11062 126 12 61 chr2 192343362 192346019 -60910564 + L1PA7 LINE L1 12 2797 -3357 299 0 73 0 chr2 192346019 192346060 -60910523 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 11062 126 12 61 chr2 192346060 192349790 -60906793 + L1PA7 LINE L1 2797 6154 0 6155 201 38 5 chr2 192349793 192351328 -60905255 + L1PB1 LINE L1 2629 4215 -2647 43233 41 22 2 chr2 192351336 192357366 -60899217 + L1PA3 LINE L1 1 6155 0 8257 186 20 5 chr2 192357403 192359655 -60896928 + L1PB1 LINE L1 4227 6505 -362 383 139 0 13 chr2 192359656 192359735 -60896848 + (TA)n Simple_repeat Simple_repeat 2 79 0 2576 116 11 3 chr2 192359751 192360121 -60896462 + L1PB1 LINE L1 6495 6867 0 487 238 57 16 chr2 192361756 192361878 -60894705 - MER94 DNA DNA 0 134 8 305 342 53 26 chr2 192362335 192362525 -60894058 + L2 LINE L2 2238 2432 -882 334 265 162 38 chr2 192362752 192362937 -60893646 - MLT1J1 LTR MaLR -238 208 1 184 345 0 0 chr2 192363108 192363163 -60893420 + L2 LINE L2 3029 3083 -189 29 47 0 0 chr2 192363210 192363253 -60893330 + AT_rich Low_complexity Low_complexity 1 43 0 2395 81 0 0 chr2 192363809 192364104 -60892479 - AluSc SINE Alu -14 295 1 1687 188 3 14 chr2 192365056 192365349 -60891234 - AluJb SINE Alu -17 295 6 518 133 0 12 chr2 192366077 192366160 -60890423 + MIR3 SINE MIR 121 202 -6 1803 186 42 0 chr2 192366497 192366831 -60889752 + MER7A DNA MER2_type 1 346 0 181 227 23 0 chr2 192366878 192366922 -60889661 - MIR3 SINE MIR -2 206 162 683 182 107 19 chr2 192366933 192367092 -60889491 + MER20 DNA MER1_type 2 174 -45 334 70 0 0 chr2 192368242 192368285 -60888298 - L1P4 LINE L1 -422 5743 5701 280 259 28 46 chr2 192368895 192369003 -60887580 + MLT1K LTR MaLR 449 554 -34 306 282 13 13 chr2 192369254 192369332 -60887251 + MER45 DNA AcHobo 37 114 -1467 1436 228 83 57 chr2 192369925 192370417 -60886166 + MLT1D LTR MaLR 1 505 0 22 0 0 0 chr2 192370960 192370982 -60885601 + AT_rich Low_complexity Low_complexity 1 22 0 486 296 56 0 chr2 192371505 192371647 -60884936 + L2 LINE L2 2828 2977 -336 279 174 0 0 chr2 192371656 192371702 -60884881 - LTR16C LTR ERVL -14 477 432 304 257 53 107 chr2 192371735 192371941 -60884642 - LTR16A1 LTR ERVL -202 255 61 22 35 0 0 chr2 192372104 192372133 -60884450 + AT_rich Low_complexity Low_complexity 1 29 0 281 109 0 0 chr2 192372178 192372224 -60884359 - MADE1 DNA Mariner -34 46 1 322 248 105 9 chr2 192372229 192372334 -60884249 + L2 LINE L2 3199 3313 0 1665 207 43 6 chr2 192372614 192372966 -60883617 + MLT1A1 LTR MaLR 1 365 0 819 191 0 10 chr2 192372973 192373148 -60883435 + MLT1A1-int LTR MaLR 7 177 -1233 216 295 0 0 chr2 192373553 192373614 -60882969 + (TA)n Simple_repeat Simple_repeat 2 62 0 22 0 0 0 chr2 192373959 192373981 -60882602 + AT_rich Low_complexity Low_complexity 1 22 0 1511 201 72 14 chr2 192374158 192374759 -60881824 + MER67C LTR ERV1 1 704 -6 1109 293 146 31 chr2 192375125 192376164 -60880419 - HAL1 LINE L1 -604 1903 745 36 0 0 0 chr2 192379048 192379084 -60877499 + AT_rich Low_complexity Low_complexity 1 36 0 6817 163 9 3 chr2 192379084 192379441 -60877142 - L1PB1 LINE L1 -1 6150 5797 315 0 0 0 chr2 192379441 192379476 -60877107 + (TG)n Simple_repeat Simple_repeat 1 35 0 6817 163 9 3 chr2 192379476 192381367 -60875216 - L1PB1 LINE L1 -354 5797 3891 4053 230 9 5 chr2 192381376 192382417 -60874166 + L1PB1 LINE L1 2847 3891 -2255 33 0 0 0 chr2 192383755 192383788 -60872795 + AT_rich Low_complexity Low_complexity 1 33 0 3684 149 60 0 chr2 192384203 192384855 -60871728 - L1PA16 LINE L1 -1 6165 5475 1005 202 55 19 chr2 192384863 192385120 -60871463 - L1MB8 LINE L1 -1 6177 5912 1996 120 20 11 chr2 192385124 192385504 -60871079 - L1P4 LINE L1 -581 5585 5203 237 292 50 25 chr2 192385770 192385890 -60870693 + HAL1b LINE L1 331 453 -895 1596 256 87 30 chr2 192385966 192386590 -60869993 - L1ME2 LINE L1 -24 6140 5482 353 296 55 68 chr2 192386732 192387114 -60869469 + L1M4 LINE L1 2815 3191 -2955 367 192 0 0 chr2 192387239 192387314 -60869269 + THE1C LTR MaLR 1 73 -302 374 245 10 0 chr2 192387330 192387432 -60869151 + LTR30 LTR ERV1 541 643 -79 28345 97 12 16 chr2 192387437 192392677 -60863906 + Harlequin LTR ERV1 1 4980 -1975 1209 151 120 22 chr2 192392653 192392977 -60863606 + Harlequin LTR ERV1 694 1049 -7577 * 1891 108 16 14 chr2 192392956 192393258 -60863325 + Harlequin LTR ERV1 1266 4405 -3380 1154 44 6 13 chr2 192393235 192393393 -60863190 + Harlequin LTR ERV1 1584 1740 -5156 * 5839 124 10 10 chr2 192393391 192394774 -60861809 + Harlequin LTR ERV1 504 8399 0 4873 117 21 65 chr2 192394780 192395640 -60860943 + LTR12 LTR ERV1 5 826 0 1749 153 20 10 chr2 192395642 192395943 -60860640 + THE1C LTR MaLR 72 375 0 31 44 0 0 chr2 192396263 192396308 -60860275 + AT_rich Low_complexity Low_complexity 1 45 0 203 289 111 56 chr2 192396371 192396461 -60860122 - MIR SINE MIR -95 113 19 2923 198 80 32 chr2 192398359 192399250 -60857333 + MER106B DNA MER1_type 1 933 -126 272 288 36 54 chr2 192399364 192399475 -60857108 - MER41E LTR ERV1 -50 462 354 1142 213 17 0 chr2 192399494 192399729 -60856854 - LTR43 LTR ERV1 -188 414 176 2231 97 0 0 chr2 192400029 192400308 -60856275 + AluSc SINE Alu 1 279 -30 427 348 188 36 chr2 192400403 192401073 -60855510 + L2 LINE L2 2201 2972 -342 847 182 0 55 chr2 192401610 192401775 -60854808 + AluJb SINE Alu 4 159 -153 3734 186 30 7 chr2 192403410 192404116 -60852467 + MER72 LTR ERV1 1 722 0 251 221 52 0 chr2 192404448 192404525 -60852058 - Charlie8 DNA MER1_type -1950 467 387 23 0 0 0 chr2 192404549 192404572 -60852011 + AT_rich Low_complexity Low_complexity 1 23 0 455 313 94 29 chr2 192404753 192405028 -60851555 + LTR33 LTR ERVL 1 293 -228 985 257 150 28 chr2 192405337 192405764 -60850819 - L1ME3A LINE L1 -23 6147 5661 525 271 32 32 chr2 192405829 192406195 -60850388 - MER90 LTR ERV1 -169 406 1 2098 117 4 0 chr2 192407168 192407487 -60849096 - AluSx SINE Alu 0 321 2 2052 220 63 96 chr2 192407511 192408397 -60848186 - L1MD1 LINE L1 -11 6467 5611 1078 250 99 22 chr2 192409105 192409743 -60846840 - L1MD1 LINE L1 -3479 2903 2245 338 320 87 0 chr2 192409772 192409922 -60846661 - L1MD1 LINE L1 -4562 2001 1839 * 593 308 86 61 chr2 192409919 192410046 -60846537 - L1MD1 LINE L1 -4791 1593 1471 2350 78 0 0 chr2 192410046 192410339 -60846244 - AluY SINE Alu -13 298 6 593 308 86 61 chr2 192410339 192410607 -60845976 - L1MD1 LINE L1 -4913 1471 1188 1114 174 4 71 chr2 192410653 192410906 -60845677 + MER46A DNA MER2_type 1 236 0 2158 288 66 35 chr2 192410922 192412026 -60844557 - L1MD1 LINE L1 -5228 1335 198 229 299 98 29 chr2 192412018 192412222 -60844361 - L1ME3A LINE L1 -951 5195 4978 * 262 250 0 0 chr2 192412374 192412434 -60844149 + L1ME1 LINE L1 44 103 -6293 23 78 0 0 chr2 192412434 192412485 -60844098 + AT_rich Low_complexity Low_complexity 1 51 0 276 260 6 61 chr2 192412711 192412892 -60843691 - L1M LINE L1 -2384 5424 5254 31 44 0 0 chr2 192412918 192412963 -60843620 + AT_rich Low_complexity Low_complexity 1 45 0 24 0 0 0 chr2 192412988 192413012 -60843571 + AT_rich Low_complexity Low_complexity 1 24 0 410 305 57 14 chr2 192413141 192413282 -60843301 + MIR SINE MIR 24 170 -92 213 222 0 0 chr2 192414070 192414115 -60842468 + (TCTA)n Simple_repeat Simple_repeat 1 45 0 2829 203 92 11 chr2 192414220 192414872 -60841711 + MER39 LTR ERV1 3 707 0 18928 33 1 0 chr2 192414949 192418005 -60838578 - L1PA4 LINE L1 -3 6152 3094 21234 44 5 2 chr2 192418005 192420650 -60835933 + L1PA4 LINE L1 442 3092 -3054 225 309 63 8 chr2 192420669 192420795 -60835788 + L1ME1 LINE L1 2787 2919 -3296 1169 240 18 25 chr2 192420795 192420829 -60835754 - MSTD LTR MaLR -2 394 361 6459 161 38 5 chr2 192420829 192422020 -60834563 - Tigger3b DNA MER2_type -1 1230 1 1169 240 18 25 chr2 192422020 192422322 -60834261 - MSTD LTR MaLR -35 361 4 4959 257 76 31 chr2 192422326 192422948 -60833635 + L1ME1 LINE L1 2914 3507 -2728 399 21 0 0 chr2 192422948 192422996 -60833587 + (CA)n Simple_repeat Simple_repeat 1 48 0 4959 257 76 31 chr2 192422996 192423511 -60833072 + L1ME1 LINE L1 3507 3998 -2237 2411 118 16 11 chr2 192423511 192423884 -60832699 + THE1C LTR MaLR 1 375 0 4959 257 76 31 chr2 192423884 192424872 -60831711 + L1ME1 LINE L1 3998 4941 -1294 1928 149 3 3 chr2 192424872 192425167 -60831416 - AluSx SINE Alu -15 297 3 4959 257 76 31 chr2 192425167 192425389 -60831194 + L1ME1 LINE L1 4941 5152 -1083 6427 91 10 3 chr2 192425389 192426824 -60829759 + L1PA10 LINE L1 4725 6168 0 4959 257 76 31 chr2 192426824 192427646 -60828937 + L1ME1 LINE L1 5152 6230 -5 309 257 29 0 chr2 192427681 192427786 -60828797 - L1M4 LINE L1 -1564 4582 4475 529 64 6 87 chr2 192427792 192427965 -60828618 + (TA)n Simple_repeat Simple_repeat 1 159 0 231 36 0 0 chr2 192428218 192428246 -60828337 + (TTAA)n Simple_repeat Simple_repeat 1 28 0 1886 211 22 128 chr2 192428367 192429044 -60827539 + MER77 LTR ERV1 1 605 0 275 285 85 15 chr2 192429260 192429390 -60827193 + MLT1H LTR MaLR 106 244 -305 657 327 96 33 chr2 192430262 192430720 -60825863 + L2 LINE L2 2521 3005 -308 200 310 18 80 chr2 192430860 192430973 -60825610 + L2 LINE L2 3026 3131 -182 184 306 0 0 chr2 192431045 192431094 -60825489 + L2 LINE L2 3265 3313 0 283 211 0 35 chr2 192433587 192433644 -60822939 - Tigger5 DNA MER2_type -2268 55 1 686 307 34 8 chr2 192433867 192434134 -60822449 - LTR16B LTR ERVL -3 461 188 253 226 0 0 chr2 192434227 192434280 -60822303 - LTR16B LTR ERVL -406 58 6 196 200 0 44 chr2 192434657 192434702 -60821881 + L3 LINE CR1 1426 1468 -109 34 42 0 0 chr2 192435712 192435760 -60820823 + AT_rich Low_complexity Low_complexity 1 48 0 326 295 186 0 chr2 192437166 192437295 -60819288 - MER5A DNA MER1_type 0 189 37 29 0 0 0 chr2 192438807 192438836 -60817747 + AT_rich Low_complexity Low_complexity 1 29 0 6256 240 65 28 chr2 192439072 192442571 -60814012 + L1M2b LINE L1 799 4231 -2977 235 244 0 0 chr2 192442691 192442736 -60813847 - AluJ/monomer SINE Alu -257 45 1 317 338 84 0 chr2 192442905 192443059 -60813524 + HAL1 LINE L1 1175 1341 -1166 628 294 55 47 chr2 192443405 192443763 -60812820 - MLT1I LTR MaLR -28 381 46 216 366 24 0 chr2 192443842 192443924 -60812659 + MIR SINE MIR 1 84 -178 6128 173 37 36 chr2 192444572 192446876 -60809707 + L1MA4A LINE L1 4006 6303 0 1603 167 7 27 chr2 192446889 192447182 -60809401 - AluJo SINE Alu -21 291 5 25 51 0 0 chr2 192447220 192447259 -60809324 + AT_rich Low_complexity Low_complexity 1 39 0 22 94 0 0 chr2 192447464 192447528 -60809055 + AT_rich Low_complexity Low_complexity 1 64 0 31 92 0 0 chr2 192447700 192447787 -60808796 + AT_rich Low_complexity Low_complexity 1 87 0 28 48 0 0 chr2 192448207 192448249 -60808334 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr2 192448487 192448509 -60808074 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr2 192448577 192448603 -60807980 + AT_rich Low_complexity Low_complexity 1 26 0 180 181 71 0 chr2 192448613 192448740 -60807843 + (TA)n Simple_repeat Simple_repeat 2 137 0 300 148 56 62 chr2 192448953 192449115 -60807468 + (TATAA)n Simple_repeat Simple_repeat 5 165 0 759 286 34 29 chr2 192449375 192449749 -60806834 - LTR40b LTR ERVL -62 400 1 240 278 37 56 chr2 192451860 192451968 -60804615 + L2 LINE L2 2395 2500 -814 404 269 0 0 chr2 192452004 192452108 -60804475 - U13 snRNA snRNA 0 104 1 1567 246 144 18 chr2 192452633 192453189 -60803394 + MLT1E2 LTR MaLR 1 626 0 22 0 0 0 chr2 192453953 192453975 -60802608 + AT_rich Low_complexity Low_complexity 1 22 0 1273 236 20 17 chr2 192453976 192454277 -60802306 - AluJb SINE Alu 0 302 1 22 0 0 0 chr2 192455092 192455114 -60801469 + AT_rich Low_complexity Low_complexity 1 22 0 832 230 8 75 chr2 192457310 192457575 -60799008 - MIR SINE MIR 0 262 16 25 51 0 0 chr2 192457831 192457870 -60798713 + AT_rich Low_complexity Low_complexity 1 39 0 467 366 84 5 chr2 192458051 192458242 -60798341 + LTR16C LTR ERVL 152 357 -134 1078 281 48 77 chr2 192458263 192458825 -60797758 - MLT1H1 LTR MaLR -9 546 1 218 197 214 60 chr2 192459400 192459517 -60797066 - MIR SINE MIR -7 255 121 426 317 68 26 chr2 192460022 192460439 -60796144 - L1MC/D LINE L1 -825 5321 5045 1427 181 64 21 chr2 192460597 192460879 -60795704 - AluJo SINE Alu -16 296 3 675 251 192 0 chr2 192460883 192461190 -60795393 - L1MC/D LINE L1 -3105 3041 2676 * 1476 190 66 37 chr2 192461187 192461566 -60795017 + L1MA10 LINE L1 5933 6322 -12 201 39 0 0 chr2 192461802 192461828 -60794755 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 25 65 0 0 chr2 192461903 192461949 -60794634 + AT_rich Low_complexity Low_complexity 1 46 0 23 54 0 0 chr2 192463130 192463167 -60793416 + AT_rich Low_complexity Low_complexity 1 37 0 200 345 159 0 chr2 192463405 192463518 -60793065 - L2 LINE L2 -5 3267 3137 473 298 105 52 chr2 192464574 192464822 -60791761 + MIR SINE MIR 2 262 0 250 364 118 18 chr2 192466097 192466325 -60790258 + MIR SINE MIR 12 262 0 22 80 0 0 chr2 192467950 192468000 -60788583 + AT_rich Low_complexity Low_complexity 1 50 0 426 260 81 0 chr2 192468145 192468268 -60788315 - MIR SINE MIR -58 204 72 2581 185 25 18 chr2 192468269 192468778 -60787805 - MER6A DNA MER2_type 0 605 93 537 185 265 13 chr2 192469279 192469430 -60787153 - MER5A DNA MER1_type 0 189 1 186 271 21 21 chr2 192470137 192470185 -60786398 + L2 LINE L2 3251 3298 -15 11090 28 0 0 chr2 192470259 192472337 -60784246 - L1PA4 LINE L1 -3 6152 4071 190 328 188 0 chr2 192523447 192523511 -60733072 - MIR SINE MIR -184 78 3 240 35 0 0 chr2 192523843 192523872 -60732711 + (TAA)n Simple_repeat Simple_repeat 2 30 0 183 162 0 0 chr2 192524013 192524050 -60732533 + (TAA)n Simple_repeat Simple_repeat 2 38 0 680 258 68 36 chr2 192524122 192524374 -60732209 - MIR SINE MIR -1 261 2 1975 138 6 6 chr2 192524503 192524815 -60731768 - AluSx SINE Alu 0 312 1 2048 110 7 23 chr2 192524921 192525230 -60731353 + AluSx SINE Alu 1 304 -8 2303 84 0 3 chr2 192525844 192526141 -60730442 - AluSc SINE Alu -13 296 1 184 323 54 54 chr2 192526231 192526280 -60730303 - MIR SINE MIR -16 246 195 2657 29 0 3 chr2 192526280 192526588 -60729995 - AluY SINE Alu -3 308 2 184 323 54 54 chr2 192526588 192526631 -60729952 - MIR SINE MIR -66 196 154 22 0 0 0 chr2 192526808 192526830 -60729753 + AT_rich Low_complexity Low_complexity 1 22 0 2493 57 0 19 chr2 192526873 192527217 -60729366 - AluY SINE Alu 0 338 1 23 0 0 0 chr2 192527645 192527668 -60728915 + AT_rich Low_complexity Low_complexity 1 23 0 1647 130 33 102 chr2 192528721 192529082 -60727501 - MER1B DNA MER1_type -1 336 1 1869 131 40 30 chr2 192529668 192529996 -60726587 - THE1B LTR MaLR 0 364 34 405 230 109 113 chr2 192530408 192530565 -60726018 + MIR SINE MIR 29 186 -76 1993 220 43 24 chr2 192530565 192531074 -60725509 + Charlie1b DNA MER1_type 5 523 0 405 230 109 113 chr2 192531074 192531146 -60725437 + MIR SINE MIR 186 257 -5 23 0 0 0 chr2 192531201 192531224 -60725359 + AT_rich Low_complexity Low_complexity 1 23 0 2856 134 97 0 chr2 192531226 192531719 -60724864 - L1PA16 LINE L1 -9 6157 5617 28904 126 12 59 chr2 192531759 192538231 -60718352 - L1PA8 LINE L1 -6 6166 14 204 67 0 0 chr2 192538394 192538424 -60718159 + (TA)n Simple_repeat Simple_repeat 1 30 0 236 348 59 7 chr2 192538650 192538785 -60717798 - L2 LINE L2 -5 3308 3167 216 0 0 0 chr2 192539933 192539957 -60716626 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 217 397 0 0 chr2 192540094 192540172 -60716411 - L3 LINE CR1 -118 1459 1382 24 53 0 0 chr2 192540434 192540472 -60716111 + AT_rich Low_complexity Low_complexity 1 38 0 2161 71 0 56 chr2 192541026 192541348 -60715235 + AluY SINE Alu 1 304 -7 364 292 129 17 chr2 192542402 192542580 -60714003 + MLT1L LTR MaLR 400 597 -18 28 48 0 0 chr2 192542962 192543004 -60713579 + AT_rich Low_complexity Low_complexity 1 42 0 1310 133 65 0 chr2 192544161 192544409 -60712174 - L1MA6 LINE L1 0 6300 6037 23 0 0 0 chr2 192544534 192544557 -60712026 + AT_rich Low_complexity Low_complexity 1 23 0 226 305 75 92 chr2 192545109 192545348 -60711235 - L3 LINE CR1 -165 1412 1178 270 270 0 0 chr2 192545972 192546046 -60710537 - MLT1H LTR MaLR -470 79 6 3551 45 5 0 chr2 192546352 192546801 -60709782 + L1PA7 LINE L1 5704 6154 0 2425 161 124 21 chr2 192547413 192547930 -60708653 + MER101B LTR ERV1 1 570 0 2159 129 3 0 chr2 192548269 192548580 -60708003 - AluSx SINE Alu 0 312 1 23 33 0 0 chr2 192548769 192548799 -60707784 + AT_rich Low_complexity Low_complexity 1 30 0 782 224 72 50 chr2 192552071 192552503 -60704080 - MLT1F1 LTR MaLR -7 535 1 21 36 0 0 chr2 192553540 192553568 -60703015 + AT_rich Low_complexity Low_complexity 1 28 0 394 0 0 0 chr2 192555710 192555754 -60700829 + THE1C LTR MaLR 1 44 -331 215 250 0 31 chr2 192555924 192555988 -60700595 + (CATATA)n Simple_repeat Simple_repeat 6 67 0 1499 142 79 59 chr2 192557097 192557400 -60699183 - AluSq SINE Alu -4 309 1 26 0 0 0 chr2 192557455 192557481 -60699102 + AT_rich Low_complexity Low_complexity 1 26 0 25 51 0 0 chr2 192557787 192557826 -60698757 + AT_rich Low_complexity Low_complexity 1 39 0 31 0 0 0 chr2 192558720 192558751 -60697832 + AT_rich Low_complexity Low_complexity 1 31 0 25 83 0 0 chr2 192560091 192560151 -60696432 + AT_rich Low_complexity Low_complexity 1 60 0 23 68 0 0 chr2 192560477 192560521 -60696062 + AT_rich Low_complexity Low_complexity 1 44 0 643 192 172 0 chr2 192560973 192561176 -60695407 + Charlie5 DNA MER1_type 2367 2604 -8 21 36 0 0 chr2 192561936 192561964 -60694619 + AT_rich Low_complexity Low_complexity 1 28 0 26 50 0 0 chr2 192562181 192562221 -60694362 + AT_rich Low_complexity Low_complexity 1 40 0 21 36 0 0 chr2 192563195 192563223 -60693360 + AT_rich Low_complexity Low_complexity 1 28 0 212 42 0 104 chr2 192563810 192563858 -60692725 + (TTTTTA)n Simple_repeat Simple_repeat 5 47 0 220 136 0 23 chr2 192564287 192564331 -60692252 + (TAAAA)n Simple_repeat Simple_repeat 3 45 0 896 92 8 15 chr2 192564410 192564540 -60692043 + AluSq/x SINE Alu 1 129 -183 216 175 48 0 chr2 192565148 192565211 -60691372 + CT-rich Low_complexity Low_complexity 2 67 0 231 386 18 9 chr2 192565710 192565824 -60690759 + L2 LINE L2 3199 3313 0 2925 99 40 0 chr2 192566409 192566835 -60689748 + L1MA1 LINE L1 5860 6302 0 25 0 0 0 chr2 192567121 192567146 -60689437 + AT_rich Low_complexity Low_complexity 1 25 0 2302 164 119 11 chr2 192568601 192569039 -60687544 + LTR45B LTR ERV1 5 489 0 1614 260 132 25 chr2 192569158 192569710 -60686873 - L1ME2 LINE L1 -16 6148 5510 1352 244 16 16 chr2 192569710 192570075 -60686508 - MLT1A1 LTR MaLR 0 365 1 1614 260 132 25 chr2 192570075 192570196 -60686387 - L1ME2 LINE L1 -654 5510 5403 1487 259 41 42 chr2 192570198 192570881 -60685702 - L1ME2 LINE L1 -864 5282 4601 * 2511 284 76 30 chr2 192570874 192572116 -60684467 + L1MEc LINE L1 245 1543 -5064 2208 250 57 43 chr2 192572123 192572250 -60684333 + L1MEc LINE L1 1416 1540 -4886 198 71 0 0 chr2 192572250 192572278 -60684305 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2208 250 57 43 chr2 192572278 192573911 -60682672 + L1MEc LINE L1 1540 3482 -2944 5198 133 16 69 chr2 192573939 192574041 -60682542 + L1PA15 LINE L1 5227 5333 -832 1917 157 3 0 chr2 192574041 192574335 -60682248 + AluSx SINE Alu 1 295 -17 5198 133 16 69 chr2 192574335 192575198 -60681385 + L1PA15 LINE L1 5333 6161 -4 365 310 50 19 chr2 192575187 192575448 -60681135 + L1MEc LINE L1 3488 3756 -2670 * 976 206 115 10 chr2 192575445 192575732 -60680851 + L1MEc LINE L1 4227 5535 -891 743 247 96 11 chr2 192575771 192576042 -60680541 - L1MEc LINE L1 -2191 4750 4457 430 250 41 61 chr2 192576045 192576241 -60680342 - L1MEc LINE L1 -3241 3700 3509 279 0 0 0 chr2 192576276 192576307 -60680276 + (TG)n Simple_repeat Simple_repeat 2 32 0 332 246 16 0 chr2 192576343 192576404 -60680179 - MER2 DNA MER2_type 0 345 284 1227 179 5 0 chr2 192576439 192576646 -60679937 - MER2 DNA MER2_type -136 209 2 451 221 44 0 chr2 192576694 192576830 -60679753 - L1MEc LINE L1 -3515 3426 3285 1395 232 110 69 chr2 192576933 192577830 -60678753 - L1MEc LINE L1 -3985 3137 2204 247 274 89 37 chr2 192578006 192578141 -60678442 - L1MEc LINE L1 -6262 161 20 202 229 0 0 chr2 192578291 192578339 -60678244 + (TA)n Simple_repeat Simple_repeat 1 48 0 695 318 11 11 chr2 192578836 192579103 -60677480 - L1ME3 LINE L1 -24 6138 5872 2153 248 49 9 chr2 192581061 192581633 -60674950 - MER90 LTR ERV1 0 614 20 234 340 10 10 chr2 192581998 192582095 -60674488 - MIR SINE MIR -81 127 31 1816 153 27 0 chr2 192582473 192582773 -60673810 + Tigger3(Golem) DNA MER2_type 1 308 -2721 2220 96 5 76 chr2 192582773 192582915 -60673668 - L1PB1 LINE L1 0 6151 6001 2075 142 0 0 chr2 192582915 192583218 -60673365 - AluSx SINE Alu -7 305 3 2220 96 5 76 chr2 192583218 192583471 -60673112 - L1PB1 LINE L1 -150 6001 5784 238 36 0 0 chr2 192583472 192583500 -60673083 + (CA)n Simple_repeat Simple_repeat 2 29 0 668 187 6 18 chr2 192583500 192583671 -60672912 + (TA)n Simple_repeat Simple_repeat 1 169 0 13036 199 29 9 chr2 192583789 192586864 -60669719 - L1PBa LINE L1 -1060 5802 2666 1919 176 20 50 chr2 192586902 192587299 -60669284 + MER61D LTR ERV1 114 498 -3 8860 102 58 1 chr2 192587300 192588742 -60667841 - L1PBa LINE L1 -4190 2673 995 865 221 36 0 chr2 192588734 192588929 -60667654 - L1PBa LINE L1 -6661 202 1 * 1316 164 172 105 chr2 192589296 192589576 -60667007 + MSTB LTR MaLR 11 326 -100 2180 116 0 0 chr2 192589576 192589886 -60666697 - AluSx SINE Alu -2 310 1 1316 164 172 105 chr2 192589886 192589995 -60666588 + MSTB LTR MaLR 326 426 0 207 146 0 0 chr2 192590027 192590068 -60666515 + (TA)n Simple_repeat Simple_repeat 1 41 0 456 330 25 15 chr2 192590598 192590801 -60665782 - MIR SINE MIR -9 253 49 261 242 88 22 chr2 192591873 192591964 -60664619 - MER41E LTR ERV1 -59 453 357 186 394 0 0 chr2 192592041 192592107 -60664476 + MER5A DNA MER1_type 61 126 -63 34 102 0 0 chr2 192593641 192593759 -60662824 + AT_rich Low_complexity Low_complexity 1 118 0 22 0 0 0 chr2 192594017 192594039 -60662544 + AT_rich Low_complexity Low_complexity 1 22 0 343 324 97 11 chr2 192595165 192595341 -60661242 - L2 LINE L2 -790 2524 2334 196 346 45 39 chr2 192595446 192595602 -60660981 - L2 LINE L2 -2233 1081 925 270 361 69 31 chr2 192595897 192596246 -60660337 - L2 LINE L2 -2778 536 175 354 313 27 18 chr2 192596494 192596606 -60659977 - L2 LINE L2 0 3313 3201 2268 100 0 3 chr2 192596759 192597058 -60659525 + AluSc SINE Alu 1 298 -11 4746 35 2 0 chr2 192597063 192597628 -60658955 + L1PA5 LINE L1 5589 6154 0 23 0 0 0 chr2 192598144 192598167 -60658416 + AT_rich Low_complexity Low_complexity 1 23 0 26 30 0 0 chr2 192598653 192598686 -60657897 + AT_rich Low_complexity Low_complexity 1 33 0 33 73 0 0 chr2 192598892 192598960 -60657623 + AT_rich Low_complexity Low_complexity 1 68 0 26 64 0 0 chr2 192599291 192599338 -60657245 + AT_rich Low_complexity Low_complexity 1 47 0 1291 96 5 32 chr2 192599435 192599622 -60656961 + AluSx SINE Alu 11 192 -120 26 64 0 0 chr2 192599811 192599858 -60656725 + AT_rich Low_complexity Low_complexity 1 47 0 2224 97 10 0 chr2 192599955 192600253 -60656330 + AluSx SINE Alu 11 311 -1 615 174 37 0 chr2 192600253 192600362 -60656221 + FLAM_A SINE Alu 13 125 -17 22 35 0 0 chr2 192601539 192601568 -60655015 + AT_rich Low_complexity Low_complexity 1 29 0 980 249 41 41 chr2 192601570 192601863 -60654720 + LTR40b LTR ERVL 170 462 0 23 0 0 0 chr2 192602224 192602247 -60654336 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 192602615 192602643 -60653940 + AT_rich Low_complexity Low_complexity 1 28 0 2279 75 23 7 chr2 192602877 192603185 -60653398 - MLT2A1 LTR ERVL -131 313 1 1465 240 69 6 chr2 192603364 192603714 -60652869 - MER77 LTR ERV1 0 605 234 2138 170 44 48 chr2 192603806 192604306 -60652277 + Tigger6 DNA MER2_type 1023 1520 -77 2400 172 9 0 chr2 192604321 192604746 -60651837 - L1MB2 LINE L1 -2 6169 5741 1485 288 107 40 chr2 192605007 192606028 -60650555 - L2 LINE L2 0 3313 2230 289 254 42 0 chr2 192606052 192606123 -60650460 - MER45C DNA AcHobo 0 953 880 431 291 0 0 chr2 192606201 192606311 -60650272 - MER45C DNA AcHobo -558 395 286 2115 114 0 16 chr2 192606477 192606794 -60649789 - AluSq SINE Alu -1 312 1 30 59 0 0 chr2 192606946 192606997 -60649586 + AT_rich Low_complexity Low_complexity 1 51 0 22 0 0 0 chr2 192607373 192607395 -60649188 + AT_rich Low_complexity Low_complexity 1 22 0 1775 228 77 24 chr2 192607850 192608319 -60648264 + LTR42 LTR ERVL 1 494 -1 1064 360 62 28 chr2 192610883 192611916 -60644667 - L2 LINE L2 -1 3312 2241 1962 326 121 21 chr2 192611994 192613215 -60643368 + L2 LINE L2 482 1824 -1490 490 335 188 13 chr2 192613251 192613624 -60642959 + L2 LINE L2 2521 2958 -356 362 322 79 17 chr2 192613712 192613889 -60642694 + L2 LINE L2 3117 3304 -9 1016 334 188 20 chr2 192613906 192614640 -60641943 + L2 LINE L2 1781 2637 -677 1866 254 49 16 chr2 192614642 192615089 -60641494 + MLT2B2 LTR ERVL 10 476 -39 473 0 18 0 chr2 192615089 192615146 -60641437 + (TCTA)n Simple_repeat Simple_repeat 4 61 0 1866 254 49 16 chr2 192615146 192615187 -60641396 + MLT2B2 LTR ERVL 476 514 -1 3343 71 7 9 chr2 192615309 192615760 -60640823 - L1PA7 LINE L1 -3 6151 5702 717 307 118 57 chr2 192615784 192616079 -60640504 + L2 LINE L2 2697 2972 -341 2281 156 18 45 chr2 192616079 192616521 -60640062 - MSTB1 LTR MaLR -2 430 1 717 307 118 57 chr2 192616521 192616790 -60639793 + L2 LINE L2 2972 3313 0 22 88 0 0 chr2 192617273 192617330 -60639253 + AT_rich Low_complexity Low_complexity 1 57 0 534 43 0 0 chr2 192617622 192617691 -60638892 + (TCTA)n Simple_repeat Simple_repeat 1 69 0 22 35 0 0 chr2 192618564 192618593 -60637990 + AT_rich Low_complexity Low_complexity 1 29 0 254 111 0 0 chr2 192618869 192618914 -60637669 - LTR66 LTR ERVL -172 438 394 327 25 0 0 chr2 192618916 192618956 -60637627 + (GA)n Simple_repeat Simple_repeat 2 41 0 566 337 40 31 chr2 192620439 192620947 -60635636 + HERV16 LTR ERVL 1678 2241 -3413 250 236 28 14 chr2 192621113 192621185 -60635398 + HERV16 LTR ERVL 1719 1791 -3205 15454 187 52 35 chr2 192621522 192622221 -60634362 - L1PA13 LINE L1 -3 6811 6125 2012 78 48 0 chr2 192622221 192622491 -60634092 + AluY SINE Alu 1 283 -28 288 102 0 0 chr2 192622491 192622540 -60634043 + (TTAAA)n Simple_repeat Simple_repeat 3 51 0 15454 187 52 35 chr2 192622540 192623133 -60633450 - L1PA13 LINE L1 -689 6125 5544 2141 118 10 51 chr2 192623133 192623314 -60633269 + THE1C LTR MaLR 3 161 -214 1975 123 0 30 chr2 192623314 192623638 -60632945 + AluSx SINE Alu 2 312 0 2141 118 10 51 chr2 192623638 192623845 -60632738 + THE1C LTR MaLR 161 375 0 15454 187 52 35 chr2 192623845 192627989 -60628594 - L1PA13 LINE L1 -1270 5544 1275 1374 273 57 29 chr2 192627978 192628363 -60628220 - L1PA13 LINE L1 -5750 1037 642 * 2816 153 26 0 chr2 192628465 192628923 -60627660 - L1PA13 LINE L1 -6317 470 1 23 0 0 0 chr2 192630370 192630393 -60626190 + AT_rich Low_complexity Low_complexity 1 23 0 291 254 28 0 chr2 192631129 192631157 -60625426 + MER3 DNA MER1_type 18 47 -162 654 199 78 37 chr2 192631157 192631348 -60625235 - MER3 DNA MER1_type 0 209 11 27 0 0 0 chr2 192631629 192631656 -60624927 + AT_rich Low_complexity Low_complexity 1 27 0 366 129 0 0 chr2 192632191 192632253 -60624330 + (GA)n Simple_repeat Simple_repeat 1 62 0 329 274 102 18 chr2 192632603 192632946 -60623637 + L1ME LINE L1 1175 1546 -4984 22 0 0 0 chr2 192633029 192633051 -60623532 + AT_rich Low_complexity Low_complexity 1 22 0 613 344 75 42 chr2 192633060 192633461 -60623122 + L1ME LINE L1 1732 2145 -4576 5503 155 11 10 chr2 192633518 192634565 -60622018 + L1PA16 LINE L1 5105 6157 -9 396 0 0 0 chr2 192634608 192634652 -60621931 + (TA)n Simple_repeat Simple_repeat 1 44 0 1394 279 74 39 chr2 192634661 192635298 -60621285 + MER76 LTR ERV 1 659 -29 378 129 0 0 chr2 192635299 192635361 -60621222 + (TG)n Simple_repeat Simple_repeat 1 62 0 683 275 52 38 chr2 192635434 192635891 -60620692 + L1ME LINE L1 2479 2949 -3591 1055 294 103 45 chr2 192635921 192636288 -60620295 - L1ME3A LINE L1 -30 6140 5796 1874 151 3 3 chr2 192636288 192636587 -60619996 - AluJb SINE Alu -13 299 1 1055 294 103 45 chr2 192636587 192636792 -60619791 - L1ME3A LINE L1 -374 5796 5605 2101 127 0 3 chr2 192636792 192637099 -60619484 + AluSp SINE Alu 1 306 -7 1055 294 103 45 chr2 192637099 192637236 -60619347 - L1ME3A LINE L1 -565 5605 5402 232 310 64 29 chr2 192637511 192637682 -60618901 - L1ME3A LINE L1 -874 5272 5096 308 364 0 0 chr2 192638069 192638190 -60618393 - L1ME3A LINE L1 -287 5883 5763 1539 165 154 45 chr2 192638251 192638633 -60617950 - MSTA LTR MaLR 0 428 5 7567 218 29 25 chr2 192638633 192640204 -60616379 - MSTA-int LTR MaLR 0 1580 4 1975 149 138 5 chr2 192640207 192640583 -60616000 - MSTA LTR MaLR 0 428 3 1598 230 31 47 chr2 192640854 192641367 -60615216 - MLT1D LTR MaLR 0 505 1 284 253 101 0 chr2 192641797 192641876 -60614707 + LTR10A LTR ERV1 13 99 -510 1692 136 194 12 chr2 192641903 192642227 -60614356 + LTR10A LTR ERV1 227 609 0 530 179 8 34 chr2 192642341 192642458 -60614125 - L1MA10 LINE L1 0 6334 6221 2021 143 0 13 chr2 192642502 192642809 -60613774 - AluSq SINE Alu -10 303 1 214 213 293 0 chr2 192643012 192643087 -60613496 + L2 LINE L2 2272 2368 -946 203 396 47 24 chr2 192643293 192643462 -60613121 - L2 LINE L2 0 3272 3100 581 321 33 5 chr2 192643634 192643818 -60612765 + MIR SINE MIR 5 193 -69 427 272 34 128 chr2 192645997 192646262 -60610321 + MIR SINE MIR 23 262 0 273 212 53 99 chr2 192646533 192646684 -60609899 - MIR SINE MIR 0 262 119 227 176 39 0 chr2 192646708 192646759 -60609824 + (TA)n Simple_repeat Simple_repeat 1 53 0 308 116 101 0 chr2 192647439 192647508 -60609075 - L1MA1 LINE L1 0 6302 6227 2804 131 41 54 chr2 192647508 192648182 -60608401 - L1MA2 LINE L1 -48 6256 4288 * 11169 177 25 11 chr2 192648175 192649141 -60607442 - L1M1 LINE L1 -543 7180 6228 396 0 0 0 chr2 192649141 192649185 -60607398 + (TG)n Simple_repeat Simple_repeat 2 45 0 11169 177 25 11 chr2 192649185 192650995 -60605588 - L1M1 LINE L1 -1495 6228 4363 601 139 65 116 chr2 192650995 192651210 -60605373 - L1M1 LINE L1 -7340 225 22 201 233 0 0 chr2 192651617 192651660 -60604923 + CT-rich Low_complexity Low_complexity 2 44 0 249 108 0 0 chr2 192651663 192651700 -60604883 + (CA)n Simple_repeat Simple_repeat 1 37 0 24 0 0 0 chr2 192652852 192652876 -60603707 + AT_rich Low_complexity Low_complexity 1 24 0 407 322 62 18 chr2 192653045 192653272 -60603311 + L1MC/D LINE L1 5542 5778 -2030 2618 219 30 22 chr2 192653324 192654121 -60602462 + L1ME4a LINE L1 5155 5979 -142 198 143 0 0 chr2 192654240 192654275 -60602308 + (TG)n Simple_repeat Simple_repeat 1 35 0 180 0 0 0 chr2 192655173 192655193 -60601390 + (T)n Simple_repeat Simple_repeat 1 20 0 2760 3 0 0 chr2 192655772 192656073 -60600510 - AluY SINE Alu -10 301 1 269 305 85 18 chr2 192656109 192656273 -60600310 + LTR33A LTR ERVL 332 506 -17 452 255 9 0 chr2 192657242 192657348 -60599235 + MIR SINE MIR 33 139 -123 3645 226 40 15 chr2 192657349 192658044 -60598539 - L1P LINE L1 -970 5176 4500 1997 88 0 0 chr2 192658044 192658317 -60598266 - L1PA5 LINE L1 -2 6152 5880 3645 226 40 15 chr2 192658317 192658391 -60598192 - L1P LINE L1 -1646 4500 4429 426 20 0 0 chr2 192658391 192658442 -60598141 + (TG)n Simple_repeat Simple_repeat 2 52 0 3645 226 40 15 chr2 192658442 192658628 -60597955 - L1P LINE L1 -1717 4429 4196 4682 167 34 30 chr2 192658639 192658778 -60597805 + L1PA16 LINE L1 5240 5377 -789 2594 84 92 12 chr2 192658778 192659193 -60597390 - LTR7 LTR ERV1 -2 448 1 2004 201 26 79 chr2 192659193 192659771 -60596812 + MLT2B3 LTR ERVL 3 554 0 4682 167 34 30 chr2 192659771 192660544 -60596039 + L1PA16 LINE L1 5376 6156 -10 277 211 18 0 chr2 192660589 192660646 -60595937 + MIR SINE MIR 191 248 -14 207 100 0 0 chr2 192660649 192660679 -60595904 + (TTA)n Simple_repeat Simple_repeat 1 30 0 496 319 115 55 chr2 192661551 192661915 -60594668 - LTR16A LTR ERVL -11 439 54 258 32 0 0 chr2 192662057 192662088 -60594495 + (GA)n Simple_repeat Simple_repeat 1 31 0 21 71 0 0 chr2 192662445 192662487 -60594096 + AT_rich Low_complexity Low_complexity 1 42 0 365 292 104 91 chr2 192663130 192663756 -60592827 - L1ME4a LINE L1 -48 6073 5440 245 236 134 8 chr2 192663774 192663901 -60592682 - L1ME4a LINE L1 -733 5431 5289 395 294 93 86 chr2 192665122 192665799 -60590784 - L1ME4a LINE L1 -1343 4803 4122 252 0 0 0 chr2 192667165 192667193 -60589390 + (TTG)n Simple_repeat Simple_repeat 3 30 0 1725 135 7 64 chr2 192667193 192667489 -60589094 - AluSx SINE Alu -32 280 2 216 0 0 0 chr2 192667805 192667829 -60588754 + (TG)n Simple_repeat Simple_repeat 1 24 0 22 35 0 0 chr2 192669158 192669187 -60587396 + AT_rich Low_complexity Low_complexity 1 29 0 3294 165 53 19 chr2 192669289 192670021 -60586562 - L1MC2 LINE L1 0 6344 5588 21 0 0 0 chr2 192670840 192670861 -60585722 + AT_rich Low_complexity Low_complexity 1 21 0 551 301 55 6 chr2 192671323 192671506 -60585077 - MIR SINE MIR -8 254 63 4013 166 27 13 chr2 192671582 192673372 -60583211 + L1MA6 LINE L1 4124 6016 -284 2021 185 34 32 chr2 192673383 192673931 -60582652 + MLT2A2 LTR ERVL 2 554 0 1201 177 56 0 chr2 192673931 192674197 -60582386 + L1MA8 LINE L1 6006 6286 -5 34 72 0 0 chr2 192674363 192674432 -60582151 + AT_rich Low_complexity Low_complexity 1 69 0 31 68 0 0 chr2 192674806 192674865 -60581718 + AT_rich Low_complexity Low_complexity 1 59 0 22 0 0 0 chr2 192675406 192675428 -60581155 + AT_rich Low_complexity Low_complexity 1 22 0 1909 129 6 28 chr2 192675472 192675816 -60580767 - AluY SINE Alu 0 337 1 307 325 9 9 chr2 192676279 192676393 -60580190 + MIR SINE MIR 149 262 0 3127 72 16 11 chr2 192676844 192677290 -60579293 + LTR7 LTR ERV1 1 448 -2 1175 185 126 0 chr2 192677411 192677568 -60579015 - AluJo SINE Alu -16 286 150 210 37 0 0 chr2 192677568 192677595 -60578988 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1175 185 126 0 chr2 192677595 192677691 -60578892 - AluJo SINE Alu -152 150 1 238 217 14 43 chr2 192677802 192677871 -60578712 + (TATATG)n Simple_repeat Simple_repeat 6 72 0 27 0 0 0 chr2 192678371 192678398 -60578185 + AT_rich Low_complexity Low_complexity 1 27 0 1494 193 0 18 chr2 192679259 192679539 -60577044 + AluJo SINE Alu 13 287 -25 23 0 0 0 chr2 192680060 192680083 -60576500 + AT_rich Low_complexity Low_complexity 1 23 0 2314 67 0 7 chr2 192682334 192682632 -60573951 - AluY SINE Alu -15 296 1 515 224 95 57 chr2 192683098 192683308 -60573275 + MER106A DNA MER1_type 12 229 -7 244 308 44 0 chr2 192683351 192683442 -60573141 - L1ME2 LINE L1 -3 6161 6067 438 244 41 23 chr2 192683543 192683764 -60572819 - L1ME2 LINE L1 -194 5968 5686 2353 86 0 0 chr2 192684653 192684957 -60571626 - AluY SINE Alu -7 304 1 1564 186 102 6 chr2 192685211 192685544 -60571039 + MLT1A1 LTR MaLR 1 365 0 938 221 72 57 chr2 192685600 192686200 -60570383 + L1ME LINE L1 4963 5572 -594 1350 104 0 6 chr2 192686593 192686776 -60569807 + AluSc SINE Alu 1 182 -127 1766 112 18 25 chr2 192686954 192687232 -60569351 - AluSq SINE Alu -37 276 1 360 318 66 41 chr2 192687240 192687603 -60568980 - L1MEd LINE L1 -1133 1357 888 233 271 176 12 chr2 192688321 192688406 -60568177 + MIR SINE MIR 157 255 -7 1054 286 42 18 chr2 192689319 192689753 -60566830 - L1ME1 LINE L1 -8 6158 5715 4551 207 125 44 chr2 192689759 192689888 -60566695 - L1P5 LINE L1 -691 5460 5343 2252 121 55 6 chr2 192689888 192690235 -60566348 + THE1B LTR MaLR 1 364 0 4551 207 125 44 chr2 192690235 192691620 -60564963 - L1P5 LINE L1 -808 5343 3784 245 29 0 29 chr2 192691622 192691657 -60564926 + (TA)n Simple_repeat Simple_repeat 1 34 0 1440 186 21 10 chr2 192692680 192692970 -60563613 + MLT2D LTR ERVL 1 293 -121 228 35 0 0 chr2 192692996 192693025 -60563558 + (TG)n Simple_repeat Simple_repeat 2 30 0 244 254 14 0 chr2 192693027 192693098 -60563485 + (TA)n Simple_repeat Simple_repeat 2 73 0 22 0 0 0 chr2 192693380 192693402 -60563181 + AT_rich Low_complexity Low_complexity 1 22 0 227 209 0 0 chr2 192693424 192693467 -60563116 - MER103 DNA DNA -91 75 33 624 249 72 55 chr2 192693622 192693910 -60562673 - MLT1B LTR MaLR -73 301 1 182 61 0 61 chr2 192694250 192694283 -60562300 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 905 178 13 6 chr2 192694647 192694804 -60561779 + MER5A DNA MER1_type 7 164 -25 216 0 0 0 chr2 192695038 192695062 -60561521 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1932 119 44 12 chr2 192695604 192695948 -60560635 + L1P4 LINE L1 5267 5621 -545 4454 171 15 49 chr2 192695955 192696902 -60559681 + L1MB1 LINE L1 5254 6168 0 521 225 100 38 chr2 192696987 192697227 -60559356 + L1MEc LINE L1 1668 1922 -4474 1067 139 143 0 chr2 192697433 192697470 -60559113 - L1MA8 LINE L1 -22 6269 6239 198 0 0 0 chr2 192697470 192697492 -60559091 + (TA)n Simple_repeat Simple_repeat 1 22 0 1067 139 143 0 chr2 192697492 192697684 -60558899 - L1MA8 LINE L1 -52 6239 6007 1603 155 115 33 chr2 192697735 192698160 -60558423 - pTR5 LTR ERV1 -1238 1200 741 862 282 36 17 chr2 192699233 192699534 -60557049 + L1MD2 LINE L1 6030 6336 -23 767 188 7 7 chr2 192700034 192700188 -60556395 - FRAM SINE Alu -23 153 1 1161 141 10 35 chr2 192700338 192700537 -60556046 - THE1B LTR MaLR 0 364 171 32 0 0 0 chr2 192700537 192700569 -60556014 + AT_rich Low_complexity Low_complexity 1 32 0 1018 61 8 0 chr2 192700570 192700701 -60555882 - AluY SINE Alu -179 132 1 1699 101 24 8 chr2 192700729 192700976 -60555607 + AluSp SINE Alu 30 280 -33 234 62 0 0 chr2 192700976 192701008 -60555575 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 886 99 126 13 chr2 192701012 192701163 -60555420 - THE1B LTR MaLR -196 168 1 2294 82 0 41 chr2 192701545 192701861 -60554722 - AluSg SINE Alu -7 303 1 1593 144 77 10 chr2 192701925 192702238 -60554345 - L1MB3 LINE L1 -3 6180 5847 212 254 15 15 chr2 192703115 192703182 -60553401 + GA-rich Low_complexity Low_complexity 4 70 0 191 122 0 24 chr2 192703700 192703741 -60552842 + (TAAAA)n Simple_repeat Simple_repeat 4 43 0 828 263 99 7 chr2 192703783 192704209 -60552374 + L1MEc LINE L1 2846 3310 -2905 2253 285 105 15 chr2 192704265 192705301 -60551282 + L1MEc LINE L1 3434 4620 -1595 607 208 0 24 chr2 192705301 192705426 -60551157 + FLAM_A SINE Alu 1 122 -11 2253 285 105 15 chr2 192705426 192705737 -60550846 + L1MEc LINE L1 4620 4902 -1313 23 86 0 0 chr2 192705779 192705837 -60550746 + AT_rich Low_complexity Low_complexity 1 58 0 21 89 0 0 chr2 192705871 192705927 -60550656 + AT_rich Low_complexity Low_complexity 1 56 0 2375 267 97 10 chr2 192705981 192707115 -60549468 - L1M4c LINE L1 -4583 2063 825 374 293 23 22 chr2 192707284 192707446 -60549137 - L1M4c LINE L1 -6218 428 2 208 194 32 16 chr2 192707762 192707824 -60548759 + (TGAA)n Simple_repeat Simple_repeat 1 63 0 2088 122 0 16 chr2 192707869 192708181 -60548402 + AluSx SINE Alu 3 309 -3 218 306 0 24 chr2 192708247 192708332 -60548251 - L2 LINE L2 -1230 2084 2002 444 264 150 12 chr2 192709556 192709810 -60546773 + Charlie2a DNA MER1_type 337 625 -2157 400 273 41 10 chr2 192709827 192710021 -60546562 + Charlie2a DNA MER1_type 739 938 -1924 2166 214 7 13 chr2 192710025 192710482 -60546101 + L1M2 LINE L1 1292 1745 -5104 774 271 112 11 chr2 192710522 192710995 -60545588 + Charlie2a DNA MER1_type 1015 1535 -1327 868 289 52 7 chr2 192711037 192711307 -60545276 + HERVL40 LTR ERVL 5210 5491 -39 798 251 56 72 chr2 192711348 192711667 -60544916 + LTR40b LTR ERVL 149 462 0 462 343 61 18 chr2 192712066 192712346 -60544237 + MER110 LTR ERV1 173 464 -27 473 214 22 17 chr2 192713682 192713860 -60542723 + (TA)n Simple_repeat Simple_repeat 2 180 0 2669 140 11 20 chr2 192714036 192714485 -60542098 + MER65A LTR ERV1 1 445 0 1216 205 45 0 chr2 192714683 192714907 -60541676 + Tigger3b DNA MER2_type 1 234 -997 7062 176 24 10 chr2 192714933 192715904 -60540679 + L1PA15 LINE L1 3823 4779 -1386 410 0 0 20 chr2 192715904 192715955 -60540628 + (TAGA)n Simple_repeat Simple_repeat 4 53 0 7062 176 24 10 chr2 192715955 192717225 -60539358 + L1PA15 LINE L1 4779 6097 -68 3929 227 68 56 chr2 192717225 192718188 -60538395 + Tigger3b DNA MER2_type 257 1231 0 195 161 54 0 chr2 192718422 192718478 -60538105 + (TA)n Simple_repeat Simple_repeat 2 60 0 206 341 58 17 chr2 192719467 192719640 -60536943 - MIR SINE MIR -15 247 68 1690 177 71 19 chr2 192720591 192720913 -60535670 + Tigger7 DNA MER2_type 6 344 -2143 748 200 7 0 chr2 192720911 192721056 -60535527 + Tigger7 DNA MER2_type 2342 2487 0 * 392 231 149 8 chr2 192721086 192721207 -60535376 - MIR SINE MIR -13 249 112 348 253 33 22 chr2 192722092 192722183 -60534400 - L2 LINE L2 0 3313 3222 25 51 0 0 chr2 192722680 192722719 -60533864 + AT_rich Low_complexity Low_complexity 1 39 0 270 0 0 0 chr2 192723974 192724004 -60532579 + (TA)n Simple_repeat Simple_repeat 1 30 0 * 679 22 22 0 chr2 192724003 192724092 -60532491 + (GA)n Simple_repeat Simple_repeat 2 92 0 1225 188 4 36 chr2 192724096 192724373 -60532210 - AluSx SINE Alu -44 268 1 3038 210 23 45 chr2 192724383 192724889 -60531694 - L1MEc LINE L1 -2368 3847 3368 2261 117 3 0 chr2 192724889 192725198 -60531385 - AluSx SINE Alu 0 312 3 3038 210 23 45 chr2 192725198 192725597 -60530986 - L1MEc LINE L1 -2847 3368 2962 * 19343 132 10 8 chr2 192725583 192726984 -60529599 - L1PA11 LINE L1 -2 6172 4776 2111 137 0 6 chr2 192726984 192727297 -60529286 - AluY SINE Alu 0 311 1 19343 132 10 8 chr2 192727297 192729956 -60526627 - L1PA11 LINE L1 -1398 4776 2110 3312 246 13 33 chr2 192729997 192730587 -60525996 - L1 LINE L1 -3233 2982 2405 2005 136 7 3 chr2 192730587 192730882 -60525701 + AluSx SINE Alu 1 296 -16 3312 246 13 33 chr2 192730882 192731486 -60525097 - L1 LINE L1 -3810 2405 1790 519 261 161 12 chr2 192731505 192731827 -60524756 - L1MEc LINE L1 -3210 3005 2636 585 248 52 30 chr2 192731862 192732176 -60524407 - L1MEc LINE L1 -3736 2479 2201 2570 209 50 29 chr2 192732183 192733022 -60523561 + MER73 LTR ERVL 1 644 0 396 322 115 31 chr2 192733022 192733121 -60523462 - L1MEc LINE L1 -4198 2198 2109 225 0 0 0 chr2 192733121 192733146 -60523437 + (TA)n Simple_repeat Simple_repeat 2 26 0 396 322 115 31 chr2 192733146 192733332 -60523251 - L1MEc LINE L1 -4287 2109 1889 25 31 0 0 chr2 192733501 192733533 -60523050 + AT_rich Low_complexity Low_complexity 1 32 0 240 35 0 0 chr2 192733698 192733727 -60522856 + (T)n Simple_repeat Simple_repeat 1 29 0 31 58 0 0 chr2 192734777 192734829 -60521754 + AT_rich Low_complexity Low_complexity 1 52 0 256 344 55 25 chr2 192735416 192735579 -60521004 + MIR SINE MIR 34 201 -61 2427 58 0 0 chr2 192735910 192736204 -60520379 + AluY SINE Alu 1 294 -17 294 29 0 0 chr2 192736639 192736674 -60519909 + (CA)n Simple_repeat Simple_repeat 1 35 0 1801 144 26 72 chr2 192736674 192737062 -60519521 + THE1C LTR MaLR 1 370 -5 267 31 0 0 chr2 192737062 192737094 -60519489 + (CA)n Simple_repeat Simple_repeat 2 33 0 492 328 25 19 chr2 192738052 192738280 -60518303 + MIR SINE MIR 36 262 0 389 236 16 24 chr2 192738340 192738463 -60518120 - MER69 DNA AcHobo -187 2339 2218 3722 46 2 0 chr2 192738558 192739013 -60517570 - L1PA5 LINE L1 -8 6146 5691 23 54 0 0 chr2 192739259 192739296 -60517287 + AT_rich Low_complexity Low_complexity 1 37 0 229 278 0 0 chr2 192739560 192739632 -60516951 + (TA)n Simple_repeat Simple_repeat 1 72 0 22 0 0 0 chr2 192740192 192740214 -60516369 + AT_rich Low_complexity Low_complexity 1 22 0 32667 34 1 1 chr2 192740308 192745079 -60511504 - L1PA3 LINE L1 -7 6148 1378 301 280 24 64 chr2 192745323 192745448 -60511135 + L2 LINE L2 3188 3307 -6 576 301 126 17 chr2 192745541 192745881 -60510702 + MLT1G1 LTR MaLR 1 285 -245 228 270 0 0 chr2 192745955 192746018 -60510565 + L1ME1 LINE L1 3386 3448 -2698 1136 277 42 14 chr2 192746068 192746379 -60510204 - MLT1E2 LTR MaLR -42 584 250 958 218 113 25 chr2 192746384 192746668 -60509915 + L1MD2 LINE L1 5829 6137 -222 457 259 86 10 chr2 192746736 192746933 -60509650 - L1M4 LINE L1 -1691 4455 4244 1476 225 63 75 chr2 192746956 192747462 -60509121 - MLT1D LTR MaLR 0 505 6 315 224 13 0 chr2 192747530 192747606 -60508977 - L1MA10 LINE L1 -10 6324 6248 264 246 63 39 chr2 192747604 192747732 -60508851 - L1M LINE L1 -743 5423 5297 * 280 215 0 0 chr2 192747749 192747814 -60508769 - L1MB8 LINE L1 0 6178 6114 1140 268 62 16 chr2 192747814 192748854 -60507729 + L1ME1 LINE L1 4549 5662 -504 357 293 93 39 chr2 192748879 192749084 -60507499 + L1ME1 LINE L1 5946 6161 -5 301 266 29 36 chr2 192749235 192749374 -60507209 + L1MCc LINE L1 106 243 -6180 21 0 0 0 chr2 192750460 192750481 -60506102 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 192750800 192750823 -60505760 + AT_rich Low_complexity Low_complexity 1 23 0 23377 36 2 0 chr2 192753413 192757027 -60499556 + L1PA4 LINE L1 2515 6132 -23 1014 199 85 29 chr2 192758872 192759144 -60497439 - L1MD3 LINE L1 -13 7982 7696 * 1343 194 43 26 chr2 192759121 192759467 -60497116 - L1MC4a LINE L1 -440 7368 7017 31 26 0 0 chr2 192759792 192759830 -60496753 + AT_rich Low_complexity Low_complexity 1 38 0 185 420 0 0 chr2 192761570 192761639 -60494944 + L2 LINE L2 3200 3268 -45 462 343 68 29 chr2 192761688 192762119 -60494464 + L2 LINE L2 2735 3180 -133 190 227 0 23 chr2 192762179 192762223 -60494360 + L2 LINE L2 3230 3272 0 4904 121 15 27 chr2 192762388 192763230 -60493353 + L1MA2 LINE L1 5473 6304 0 810 129 0 22 chr2 192763431 192763570 -60493013 - AluSg/x SINE Alu -14 298 163 243 283 94 22 chr2 192763659 192763797 -60492786 - L1MEc LINE L1 -4386 2010 1863 366 324 84 38 chr2 192763846 192764894 -60491689 - L1MEc LINE L1 -4641 1755 660 2936 174 43 2 chr2 192764923 192765457 -60491126 - L1PA16 LINE L1 -3 6163 5608 856 203 42 0 chr2 192765639 192765856 -60490727 + L1P LINE L1 5112 5337 -809 318 344 98 18 chr2 192767424 192767648 -60488935 + MIR SINE MIR 11 252 -10 273 244 67 92 chr2 192769082 192769201 -60487382 + MER5B DNA MER1_type 26 141 -37 24 0 0 0 chr2 192769303 192769327 -60487256 + AT_rich Low_complexity Low_complexity 1 24 0 45 34 0 0 chr2 192769628 192769687 -60486896 + AT_rich Low_complexity Low_complexity 1 59 0 24 0 0 0 chr2 192769722 192769746 -60486837 + AT_rich Low_complexity Low_complexity 1 24 0 32 26 0 0 chr2 192769892 192769931 -60486652 + AT_rich Low_complexity Low_complexity 1 39 0 638 53 21 11 chr2 192770099 192770193 -60486390 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 2137 107 0 32 chr2 192770193 192770477 -60486106 - AluSc SINE Alu 0 377 10 321 210 0 16 chr2 192771050 192771112 -60485471 - MLT1D LTR MaLR -444 61 1 283 266 105 19 chr2 192771661 192771798 -60484785 - MER5B DNA MER1_type -26 163 7 202 167 33 0 chr2 192772578 192772638 -60483945 + (TA)n Simple_repeat Simple_repeat 2 63 0 1686 214 23 15 chr2 192773279 192773672 -60482911 - MSTD LTR MaLR 0 396 1 575 222 57 89 chr2 192774139 192774454 -60482129 + MER46C DNA MER2_type 17 321 -17 23 97 0 0 chr2 192775088 192775160 -60481423 + AT_rich Low_complexity Low_complexity 1 72 0 6485 73 26 4 chr2 192775194 192776229 -60480354 - L1PA8 LINE L1 0 6172 5131 4438 121 3 1 chr2 192776229 192776896 -60479687 + L1P LINE L1 3322 3989 -2157 461 264 155 27 chr2 192777863 192778011 -60478572 - MER5A DNA MER1_type -7 182 16 433 250 10 29 chr2 192778079 192778183 -60478400 - MER5B DNA MER1_type -73 105 4 216 0 0 0 chr2 192779437 192779461 -60477122 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2052 158 58 62 chr2 192779490 192779959 -60476624 - MLT1C LTR MaLR 0 467 1 497 306 155 5 chr2 192780105 192780156 -60476427 - MIR SINE MIR -12 250 208 1522 203 56 9 chr2 192780156 192780477 -60476106 - MER1B DNA MER1_type 0 337 2 497 306 155 5 chr2 192780477 192780631 -60475952 - MIR SINE MIR -54 208 14 317 373 36 0 chr2 192784081 192784191 -60472392 + MIR SINE MIR 13 126 -136 310 379 15 25 chr2 192787550 192787753 -60468830 + HAL1b LINE L1 387 587 -761 394 320 73 0 chr2 192787792 192787942 -60468641 - LTR16A LTR ERVL -5 445 285 318 349 80 54 chr2 192788283 192788836 -60467747 - HERV16 LTR ERVL -1713 3941 3375 801 255 77 105 chr2 192789017 192789409 -60467174 - MLT1B LTR MaLR 0 390 10 257 275 0 33 chr2 192789439 192789530 -60467053 - HERV16 LTR ERVL -3242 1781 1694 369 330 9 0 chr2 192790262 192790371 -60466212 - HERV16 LTR ERVL -2995 2001 1892 901 246 106 27 chr2 192790593 192790923 -60465660 - MLT1A1 LTR MaLR 0 365 10 8976 93 5 1 chr2 192790970 192792226 -60464357 - L1P3 LINE L1 -1366 4780 3520 4040 98 12 5 chr2 192792217 192792996 -60463587 + L1P3 LINE L1 4771 5556 -598 * 288 0 0 0 chr2 192793407 192793439 -60463144 + (CA)n Simple_repeat Simple_repeat 1 32 0 34 24 0 0 chr2 192793784 192793825 -60462758 + AT_rich Low_complexity Low_complexity 1 41 0 23 33 0 0 chr2 192794232 192794262 -60462321 + AT_rich Low_complexity Low_complexity 1 30 0 365 302 53 41 chr2 192794642 192794811 -60461772 + MIR3 SINE MIR 38 208 0 188 153 45 18 chr2 192796727 192796838 -60459745 + (TA)n Simple_repeat Simple_repeat 2 115 0 412 333 22 0 chr2 192796965 192797103 -60459480 - MIR SINE MIR -1 261 121 * 951 289 203 23 chr2 192797076 192797634 -60458949 + L2 LINE L2 1363 2020 -1294 495 259 19 38 chr2 192797748 192797906 -60458677 - Zaphod DNA AcHobo -6 4025 3871 1728 284 76 53 chr2 192797907 192798942 -60457641 - Zaphod DNA AcHobo -2957 1074 16 21 36 0 0 chr2 192799414 192799442 -60457141 + AT_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr2 192799938 192799970 -60456613 + AT_rich Low_complexity Low_complexity 1 32 0 24 0 0 0 chr2 192800193 192800217 -60456366 + AT_rich Low_complexity Low_complexity 1 24 0 282 293 73 24 chr2 192800328 192800451 -60456132 - MIR3 SINE MIR -5 203 75 1276 181 35 120 chr2 192800526 192800919 -60455664 + MER67C LTR ERV1 2 395 -243 1371 136 21 0 chr2 192800992 192801227 -60455356 - L1MA4 LINE L1 -9 6291 6052 288 221 137 11 chr2 192801296 192801391 -60455192 + MER67D LTR ERV1 403 509 -5 261 0 0 0 chr2 192801987 192802016 -60454567 + (CA)n Simple_repeat Simple_repeat 2 30 0 1059 193 98 7 chr2 192803482 192803756 -60452827 - L1MA9 LINE L1 -38 6274 5976 1263 242 124 68 chr2 192805504 192806286 -60450297 - L1MC4 LINE L1 -18 8024 7199 991 261 71 94 chr2 192806346 192806940 -60449643 - L1MC4a LINE L1 -799 7009 6430 2038 231 74 4 chr2 192806948 192807446 -60449137 + MER68 LTR ERV1 1 533 -29 469 241 19 57 chr2 192807584 192807742 -60448841 - L1MD1 LINE L1 -12 6230 6079 * 962 260 67 13 chr2 192807740 192808055 -60448528 - L1MD2 LINE L1 -215 6144 5813 7916 186 8 7 chr2 192808062 192809599 -60446984 - L1P LINE L1 -1571 4575 3037 1061 191 164 44 chr2 192809656 192810204 -60446379 - L1MCa LINE L1 -3908 2699 2044 * 6312 179 36 91 chr2 192810203 192810897 -60445686 - L1MCa LINE L1 -4825 1601 871 189 74 0 0 chr2 192810897 192810924 -60445659 + (TTAAA)n Simple_repeat Simple_repeat 1 27 0 6312 179 36 91 chr2 192810924 192811900 -60444683 - L1MCa LINE L1 -5555 871 22 1948 205 50 28 chr2 192811910 192812412 -60444171 - L1MD2 LINE L1 -538 5821 5309 6606 220 35 2 chr2 192812414 192813980 -60442603 + L1 LINE L1 2358 3975 -2171 1730 284 41 11 chr2 192813978 192814686 -60441897 - L1MD2 LINE L1 -850 5296 4568 * 27 49 0 0 chr2 192814710 192814751 -60441832 + AT_rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr2 192814824 192814846 -60441737 + AT_rich Low_complexity Low_complexity 1 22 0 327 259 104 7 chr2 192816801 192816936 -60439647 + L1MD2 LINE L1 6195 6342 -17 219 231 0 0 chr2 192817468 192817507 -60439076 + (CA)n Simple_repeat Simple_repeat 2 40 0 24 32 0 0 chr2 192817766 192817797 -60438786 + AT_rich Low_complexity Low_complexity 1 31 0 229 364 39 32 chr2 192817928 192818082 -60438501 - MIR SINE MIR 0 262 108 1167 311 48 33 chr2 192818634 192819496 -60437087 - L2 LINE L2 0 3313 2447 189 253 35 58 chr2 192819498 192819585 -60436998 - L2 LINE L2 -1292 2022 1938 680 71 20 0 chr2 192819640 192819738 -60436845 - AluSg/x SINE Alu -11 301 202 22 0 0 0 chr2 192819768 192819790 -60436793 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 192819876 192819897 -60436686 + AT_rich Low_complexity Low_complexity 1 21 0 477 336 52 37 chr2 192821741 192822012 -60434571 - L2 LINE L2 -578 2736 2462 340 346 8 8 chr2 192822157 192822290 -60434293 - L2 LINE L2 -1388 1926 1794 1052 208 9 0 chr2 192822943 192823169 -60433414 + L1PA16 LINE L1 5923 6150 -16 460 68 27 0 chr2 192823491 192823564 -60433019 + (TCTA)n Simple_repeat Simple_repeat 1 75 0 300 27 0 0 chr2 192824826 192824863 -60431720 + (TG)n Simple_repeat Simple_repeat 2 38 0 367 239 62 91 chr2 192824997 192825173 -60431410 + MER5B DNA MER1_type 1 171 -7 331 320 180 7 chr2 192825193 192825343 -60431240 + MER5A DNA MER1_type 13 188 -1 275 299 12 24 chr2 192827104 192827268 -60429315 + (TA)n Simple_repeat Simple_repeat 1 162 0 185 167 21 62 chr2 192827320 192827368 -60429215 - L2 LINE L2 -1 3312 3267 1158 206 72 56 chr2 192828287 192828593 -60427990 - MLT1A2 LTR MaLR 0 374 64 1648 186 10 0 chr2 192828659 192828954 -60427629 + AluJo SINE Alu 1 298 -14 2601 255 23 13 chr2 192828971 192830051 -60426532 - L1MD1 LINE L1 -307 5935 4848 658 318 8 4 chr2 192830042 192830309 -60426274 + L1M4 LINE L1 4392 4659 -1487 * 2913 147 28 0 chr2 192830294 192830804 -60425779 + L1MA3 LINE L1 5743 6266 -39 270 182 45 0 chr2 192831245 192831333 -60425250 + (CTATA)n Simple_repeat Simple_repeat 3 94 0 366 333 38 21 chr2 192831693 192831879 -60424704 - MIR SINE MIR 0 262 74 195 69 0 0 chr2 192832015 192832044 -60424539 + (TG)n Simple_repeat Simple_repeat 2 30 0 5527 139 23 35 chr2 192832048 192832241 -60424342 - Tigger4(Zombi) DNA MER2_type -64 2667 2473 2068 111 49 34 chr2 192832241 192832591 -60423992 + L1PB3 LINE L1 5793 6147 -7 5527 139 23 35 chr2 192832591 192833399 -60423184 - Tigger4(Zombi) DNA MER2_type -258 2473 1678 668 169 17 0 chr2 192833401 192833519 -60423064 - Tigger4(Zombi) DNA MER2_type -1429 1302 1183 258 206 0 0 chr2 192833619 192833682 -60422901 + (CA)n Simple_repeat Simple_repeat 2 64 0 30 45 0 0 chr2 192833813 192833857 -60422726 + AT_rich Low_complexity Low_complexity 1 44 0 258 250 24 48 chr2 192834610 192834694 -60421889 + MER94 DNA DNA 2 83 -51 292 247 21 31 chr2 192834768 192834865 -60421718 + Charlie8 DNA MER1_type 84 179 -2238 584 240 109 11 chr2 192834892 192835075 -60421508 - LTR16A LTR ERVL -16 434 234 1501 165 107 4 chr2 192835168 192835440 -60421143 + AluSx SINE Alu 1 300 -12 1132 293 80 41 chr2 192835828 192836507 -60420076 - MER20B DNA MER1_type 0 783 79 507 309 29 34 chr2 192837108 192837283 -60419300 + MIR3 SINE MIR 11 184 -24 24 53 0 0 chr2 192838314 192838352 -60418231 + AT_rich Low_complexity Low_complexity 1 38 0 263 28 28 0 chr2 192838360 192838396 -60418187 + (TA)n Simple_repeat Simple_repeat 2 38 0 2034 85 53 0 chr2 192838396 192838679 -60417904 - AluSx SINE Alu -4 308 11 1439 200 0 0 chr2 192839173 192839438 -60417145 - L1M4 LINE L1 -563 5621 5357 246 312 65 0 chr2 192839630 192839723 -60416860 - MIR SINE MIR -107 155 57 979 171 23 37 chr2 192840459 192840676 -60415907 - MER44D DNA MER2_type -110 499 16 6154 156 56 20 chr2 192840686 192841874 -60414709 - Tigger3b DNA MER2_type 0 1231 1 346 115 0 0 chr2 192842023 192842075 -60414508 - MER20 DNA MER1_type -4 215 164 24 32 0 0 chr2 192842221 192842252 -60414331 + AT_rich Low_complexity Low_complexity 1 31 0 24 53 0 0 chr2 192842946 192842984 -60413599 + AT_rich Low_complexity Low_complexity 1 38 0 2437 225 29 31 chr2 192843288 192843359 -60413224 - L1MCb LINE L1 -4851 1194 1124 240 35 0 0 chr2 192843359 192843388 -60413195 + (TG)n Simple_repeat Simple_repeat 2 30 0 2437 225 29 31 chr2 192843388 192844358 -60412225 - L1MCb LINE L1 -4921 1124 555 545 249 64 132 chr2 192844440 192844561 -60412022 - L1MCb LINE L1 -5487 558 430 2022 91 14 0 chr2 192844561 192844888 -60411695 - AluSc SINE Alu 0 331 1 545 249 64 132 chr2 192844888 192845235 -60411348 - L1MCb LINE L1 -5615 430 121 21 0 0 0 chr2 192846176 192846197 -60410386 + AT_rich Low_complexity Low_complexity 1 21 0 313 403 21 25 chr2 192846197 192846219 -60410364 + L1MC/D LINE L1 5502 5523 -2285 1832 158 0 3 chr2 192846219 192846517 -60410066 - AluSx SINE Alu -15 297 1 313 403 21 25 chr2 192846517 192846735 -60409848 + L1MC/D LINE L1 5523 5741 -2067 1065 169 70 0 chr2 192847013 192847226 -60409357 - L1MB7 LINE L1 -7 6177 5950 404 149 14 0 chr2 192847226 192847296 -60409287 + L1MC2 LINE L1 6260 6334 -10 360 179 0 0 chr2 192848208 192848275 -60408308 + L1M4 LINE L1 5683 5749 -435 * 668 218 71 6 chr2 192848268 192848438 -60408145 - L1MB7 LINE L1 -578 5600 5420 319 304 20 0 chr2 192848763 192848865 -60407718 + HERV16 LTR ERVL 2795 2898 -2098 699 350 99 20 chr2 192849072 192849818 -60406765 + HERV16 LTR ERVL 3137 3941 -1713 588 278 40 17 chr2 192849973 192850149 -60406434 + MLT1F1 LTR MaLR 13 192 -375 361 264 41 64 chr2 192850475 192850695 -60405888 + HAL1 LINE L1 2293 2507 0 229 81 0 27 chr2 192850804 192850841 -60405742 + MLT2D LTR ERVL 90 125 -289 489 143 0 0 chr2 192851635 192851712 -60404871 - MADE1 DNA Mariner -1 79 3 217 255 0 0 chr2 192851745 192851796 -60404787 - L2 LINE L2 -1063 2251 2201 697 197 16 0 chr2 192853007 192853134 -60403449 + AluJb SINE Alu 6 134 -178 754 131 12 0 chr2 192853134 192853302 -60403281 + (TA)n Simple_repeat Simple_repeat 2 171 0 24 0 0 0 chr2 192854287 192854311 -60402272 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr2 192855926 192855950 -60400633 + AT_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr2 192857455 192857475 -60399108 + (A)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr2 192857690 192857711 -60398872 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr2 192859236 192859267 -60397316 + AT_rich Low_complexity Low_complexity 1 31 0 1451 154 84 11 chr2 192859607 192859880 -60396703 - L1M3 LINE L1 -375 5808 5516 1171 279 90 69 chr2 192859909 192861690 -60394893 - L1ME3A LINE L1 -7 6163 4349 325 313 101 44 chr2 192861882 192862298 -60394285 - L1ME LINE L1 -526 5644 5208 248 179 26 51 chr2 192863049 192863127 -60393456 + (TATATG)n Simple_repeat Simple_repeat 2 77 0 23 33 0 0 chr2 192863491 192863521 -60393062 + AT_rich Low_complexity Low_complexity 1 30 0 39 74 0 0 chr2 192864040 192864121 -60392462 + AT_rich Low_complexity Low_complexity 1 81 0 395 294 63 8 chr2 192864288 192864414 -60392169 + LTR33 LTR ERVL 7 139 -382 644 308 5 10 chr2 192864543 192864751 -60391832 - LTR37B LTR ERV1 -253 215 9 286 172 62 31 chr2 192865035 192865099 -60391484 + LTR33 LTR ERVL 456 521 0 26 30 0 0 chr2 192865624 192865657 -60390926 + AT_rich Low_complexity Low_complexity 1 33 0 7421 106 4 13 chr2 192867430 192868524 -60388059 - L1PA7 LINE L1 -1161 4985 3902 6647 65 12 0 chr2 192868524 192869653 -60386930 + L1PA7 LINE L1 5002 6141 -13 182 37 37 0 chr2 192869657 192869684 -60386899 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 740 85 38 0 chr2 192869944 192870050 -60386533 - L1PA7 LINE L1 -1 6153 6044 267 31 0 0 chr2 192870150 192870182 -60386401 + (CA)n Simple_repeat Simple_repeat 1 32 0 1844 151 10 14 chr2 192870191 192870483 -60386100 + AluSx SINE Alu 2 292 -20 214 132 38 0 chr2 192870512 192870565 -60386018 + (TA)n Simple_repeat Simple_repeat 2 56 0 41 21 0 0 chr2 192870750 192870798 -60385785 + AT_rich Low_complexity Low_complexity 1 48 0 28 48 0 0 chr2 192871071 192871113 -60385470 + AT_rich Low_complexity Low_complexity 1 42 0 207 0 0 0 chr2 192871128 192871151 -60385432 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 538 100 0 0 chr2 192871155 192871235 -60385348 - L1PA5 LINE L1 -8 6146 6067 550 298 72 37 chr2 192871305 192871995 -60384588 + L1ME3A LINE L1 5123 5836 -334 27 29 0 0 chr2 192872355 192872389 -60384194 + AT_rich Low_complexity Low_complexity 1 34 0 23 0 0 0 chr2 192872772 192872795 -60383788 + AT_rich Low_complexity Low_complexity 1 23 0 288 0 0 0 chr2 192874411 192874443 -60382140 + (CA)n Simple_repeat Simple_repeat 1 32 0 22 35 0 0 chr2 192875550 192875579 -60381004 + AT_rich Low_complexity Low_complexity 1 29 0 5288 165 28 32 chr2 192875792 192876561 -60380022 - Tigger4(Zombi) DNA MER2_type -1711 1020 256 207 69 0 0 chr2 192876561 192876590 -60379993 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5288 165 28 32 chr2 192876590 192876840 -60379743 - Tigger4(Zombi) DNA MER2_type -2475 256 6 2151 117 0 0 chr2 192877192 192877491 -60379092 + AluY SINE Alu 1 299 -12 304 131 33 0 chr2 192877527 192877588 -60378995 + L1MA7 LINE L1 6227 6289 -2 22 0 0 0 chr2 192877590 192877612 -60378971 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 192878238 192878259 -60378324 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 192879171 192879192 -60377391 + AT_rich Low_complexity Low_complexity 1 21 0 1708 203 37 20 chr2 192879698 192880107 -60376476 + LTR52 LTR ERVL 1 416 -5 275 83 0 0 chr2 192881455 192881491 -60375092 - U1 snRNA snRNA -129 36 1 554 240 0 0 chr2 192882614 192882735 -60373848 + FLAM_A SINE Alu 21 141 -1 2358 77 3 3 chr2 192882842 192883142 -60373441 + AluY SINE Alu 1 300 -11 21 71 0 0 chr2 192884196 192884238 -60372345 + AT_rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr2 192884256 192884280 -60372303 + AT_rich Low_complexity Low_complexity 1 24 0 198 71 0 0 chr2 192884948 192884976 -60371607 + (CA)n Simple_repeat Simple_repeat 2 29 0 244 318 12 0 chr2 192885393 192885478 -60371105 + (TA)n Simple_repeat Simple_repeat 2 87 0 2067 121 0 57 chr2 192885877 192886208 -60370375 + AluSx SINE Alu 1 312 0 700 304 106 43 chr2 192886470 192887040 -60369543 - L2 LINE L2 0 3313 2730 1286 287 57 54 chr2 192887043 192887760 -60368823 - L2 LINE L2 -1090 2224 1506 329 245 14 122 chr2 192888052 192888199 -60368384 - MER5B DNA MER1_type -6 172 42 1984 57 0 70 chr2 192888696 192888994 -60367589 - L1PA7 LINE L1 -3 6151 5875 1238 152 0 112 chr2 192889101 192889397 -60367186 - AluJo SINE Alu -49 263 1 22 35 0 0 chr2 192892188 192892217 -60364366 + AT_rich Low_complexity Low_complexity 1 29 0 367 300 54 42 chr2 192892626 192892866 -60363717 - L1MC/D LINE L1 -2000 5808 5566 368 315 111 29 chr2 192892874 192893153 -60363430 + L1ME3A LINE L1 5855 6156 -14 1855 256 43 37 chr2 192893342 192894010 -60362573 - L1ME1 LINE L1 -5 6161 5490 * 2993 259 65 39 chr2 192893984 192895271 -60361312 - L1ME1 LINE L1 -1100 5046 3726 1154 279 114 38 chr2 192895273 192895700 -60360883 - L1ME1 LINE L1 -2587 3559 3166 1563 162 8 8 chr2 192895700 192895965 -60360618 - AluJb SINE Alu -45 267 3 1154 279 114 38 chr2 192895965 192896397 -60360186 - L1ME1 LINE L1 -2980 3166 2635 528 282 33 25 chr2 192896415 192896660 -60359923 + L1ME2 LINE L1 5912 6158 -6 247 316 83 8 chr2 192897247 192897380 -60359203 - MIR SINE MIR -7 255 113 22 0 0 0 chr2 192899068 192899090 -60357493 + AT_rich Low_complexity Low_complexity 1 22 0 407 284 96 82 chr2 192899180 192899596 -60356987 - L1ME4a LINE L1 -165 5956 5535 609 221 117 70 chr2 192899612 192899825 -60356758 + MER58A DNA MER1_type 2 224 0 4139 181 23 18 chr2 192899932 192900228 -60356355 - L1PB4 LINE L1 -75 6081 5788 198 103 0 0 chr2 192900228 192900257 -60356326 + (TA)n Simple_repeat Simple_repeat 1 29 0 4139 181 23 18 chr2 192900257 192901178 -60355405 - L1PB4 LINE L1 -368 5788 4858 4308 173 67 45 chr2 192901198 192902246 -60354337 - MER11C LTR ERVK 0 1071 1 309 289 75 46 chr2 192902253 192902426 -60354157 - L1ME1 LINE L1 -81 6085 5908 1619 214 97 82 chr2 192902431 192902766 -60353817 - L1ME1 LINE L1 -407 5777 5449 1994 134 3 3 chr2 192902766 192903065 -60353518 - AluSq SINE Alu -14 299 1 1619 214 97 82 chr2 192903065 192903245 -60353338 - L1ME1 LINE L1 -735 5449 5273 243 0 0 0 chr2 192903245 192903272 -60353311 + (TG)n Simple_repeat Simple_repeat 2 28 0 1619 214 97 82 chr2 192903272 192903457 -60353126 - L1ME1 LINE L1 -911 5273 5075 2250 113 0 0 chr2 192903457 192903768 -60352815 - AluY SINE Alu 0 311 1 1619 214 97 82 chr2 192903768 192903882 -60352701 - L1ME1 LINE L1 -1109 5075 4964 21 0 0 0 chr2 192904715 192904736 -60351847 + AT_rich Low_complexity Low_complexity 1 21 0 2267 81 0 33 chr2 192904804 192905111 -60351472 + AluY SINE Alu 1 297 -14 25 31 0 0 chr2 192905184 192905216 -60351367 + AT_rich Low_complexity Low_complexity 1 32 0 1035 378 26 33 chr2 192905711 192906472 -60350111 + L3 LINE CR1 821 1576 -1 27 49 0 0 chr2 192906817 192906858 -60349725 + AT_rich Low_complexity Low_complexity 1 41 0 2176 202 26 0 chr2 192906959 192907374 -60349209 - MSTB LTR MaLR 0 426 1 1640 114 20 0 chr2 192907903 192908157 -60348426 + L1MA1 LINE L1 6038 6296 -6 294 73 0 0 chr2 192908511 192908552 -60348031 + (TG)n Simple_repeat Simple_repeat 2 42 0 3840 226 52 13 chr2 192909347 192911567 -60345016 + L1MB4 LINE L1 3729 6180 0 5116 74 28 3 chr2 192911847 192912550 -60344033 - L1PA8A LINE L1 0 6131 5411 3623 96 9 3 chr2 192912550 192913156 -60343427 + L1P LINE L1 4813 5424 -707 27 49 0 0 chr2 192913211 192913252 -60343331 + AT_rich Low_complexity Low_complexity 1 41 0 282 29 0 0 chr2 192914118 192914153 -60342430 + (CA)n Simple_repeat Simple_repeat 2 36 0 257 313 50 0 chr2 192914901 192914981 -60341602 - L2 LINE L2 0 3313 3230 360 0 0 0 chr2 192914981 192915021 -60341562 + (CA)n Simple_repeat Simple_repeat 2 41 0 27 0 0 0 chr2 192915104 192915131 -60341452 + AT_rich Low_complexity Low_complexity 1 27 0 365 375 45 33 chr2 192916107 192916438 -60340145 - L3 LINE CR1 -112 1465 1131 260 353 17 9 chr2 192917120 192917236 -60339347 - L2 LINE L2 -2 3311 3195 22 35 0 0 chr2 192917236 192917265 -60339318 + AT_rich Low_complexity Low_complexity 1 29 0 6819 111 13 9 chr2 192917265 192918439 -60338144 - L1MA2 LINE L1 0 6304 5126 2228 199 14 14 chr2 192918421 192918914 -60337669 - L1 LINE L1 -2299 5266 4774 * 20195 168 18 22 chr2 192918908 192919490 -60337093 - L1 LINE L1 -3515 4050 3467 2088 123 0 17 chr2 192919490 192919791 -60336792 - AluSp SINE Alu -17 296 1 20195 168 18 22 chr2 192919791 192922054 -60334529 - L1 LINE L1 -4098 3467 1222 2877 86 79 0 chr2 192922054 192922474 -60334109 - MLT2A2 LTR ERVL 0 453 1 20195 168 18 22 chr2 192922474 192923677 -60332906 - L1 LINE L1 -6343 1222 16 1205 254 30 53 chr2 192923979 192924373 -60332210 + MLT1E2 LTR MaLR 1 385 -241 400 329 49 81 chr2 192925754 192926164 -60330419 + L1ME4a LINE L1 5523 5919 -202 1976 202 48 54 chr2 192926230 192926730 -60329853 - MLT1D LTR MaLR -8 497 1 22 56 0 0 chr2 192926736 192926772 -60329811 + AT_rich Low_complexity Low_complexity 1 36 0 246 299 55 24 chr2 192926986 192927113 -60329470 - L1ME LINE L1 -508 5613 5483 230 193 53 35 chr2 192927917 192927974 -60328609 + L2 LINE L2 3247 3304 -9 301 244 26 33 chr2 192927985 192928169 -60328414 + L1ME4a LINE L1 5691 5873 -248 524 237 154 30 chr2 192929146 192929509 -60327074 - Charlie2 DNA MER1_type -44 2818 2411 5067 205 59 53 chr2 192929554 192929821 -60326762 - L1MC2 LINE L1 -8 6754 6490 360 135 0 167 chr2 192929821 192929917 -60326666 - MADE1 DNA Mariner 0 80 1 5067 205 59 53 chr2 192929917 192931138 -60325445 - L1MC2 LINE L1 -272 6490 5775 1860 192 64 40 chr2 192931138 192931560 -60325023 + MSTB1 LTR MaLR 1 432 0 5067 205 59 53 chr2 192931560 192931940 -60324643 - L1MC2 LINE L1 -987 5775 5399 3772 254 70 28 chr2 192931953 192932421 -60324162 - L1MC2 LINE L1 -1312 5252 4805 13059 167 20 5 chr2 192932421 192934798 -60321785 - Tigger1 DNA MER2_type -4 2414 1 3772 254 70 28 chr2 192934798 192935848 -60320735 - L1MC2 LINE L1 -1759 4805 3671 251 242 30 40 chr2 192935857 192935956 -60320627 + L1M4 LINE L1 4985 5082 -1064 * 2311 232 83 65 chr2 192935947 192936802 -60319781 - L1MC2 LINE L1 -5185 897 2 2084 206 57 14 chr2 192936851 192937360 -60319223 - L1MC3 LINE L1 -1466 6319 5789 599 232 42 14 chr2 192937367 192937509 -60319074 - MER61D LTR ERV1 -18 483 338 2374 224 50 16 chr2 192937960 192939024 -60317559 - L1MC3 LINE L1 -764 5382 4697 28 29 0 0 chr2 192939085 192939120 -60317463 + AT_rich Low_complexity Low_complexity 1 35 0 2297 52 42 0 chr2 192940363 192940652 -60315931 - AluY SINE Alu -10 301 1 234 363 0 0 chr2 192941907 192941987 -60314596 + LTR33 LTR ERVL 101 180 -341 1759 158 6 31 chr2 192943112 192943429 -60313154 + AluSx SINE Alu 1 309 -3 210 254 0 0 chr2 192943883 192943942 -60312641 + A-rich Low_complexity Low_complexity 1 59 0 225 0 0 0 chr2 192946202 192946227 -60310356 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 2014 107 7 0 chr2 192946230 192946510 -60310073 - AluSp SINE Alu -30 283 2 1103 241 119 4 chr2 192946540 192946818 -60309765 + MLT1E LTR MaLR 284 593 0 * 1203 193 49 46 chr2 192946818 192947111 -60309472 + Charlie1 DNA MER1_type 1906 2199 -562 2098 215 68 31 chr2 192947319 192947904 -60308679 - L1MD2 LINE L1 -63 6296 5690 3161 145 9 2 chr2 192948524 192949068 -60307515 + L1MA4 LINE L1 5750 6297 -3 1117 222 124 58 chr2 192949716 192950166 -60306417 + L1ME1 LINE L1 5682 6161 -5 23 0 0 0 chr2 192950166 192950189 -60306394 + AT_rich Low_complexity Low_complexity 1 23 0 328 314 98 26 chr2 192950500 192950694 -60305889 - MLT1L LTR MaLR -54 561 354 842 320 30 43 chr2 192951221 192951687 -60304896 + LTR16B LTR ERVL 5 464 0 310 137 61 61 chr2 192951907 192952038 -60304545 + (TTAA)n Simple_repeat Simple_repeat 3 133 0 68 69 0 0 chr2 192952052 192952183 -60304400 + AT_rich Low_complexity Low_complexity 1 131 0 229 240 0 62 chr2 192952235 192952331 -60304252 + L1MC4 LINE L1 6614 6703 -1339 353 224 8 30 chr2 192952345 192952479 -60304104 + (CATA)n Simple_repeat Simple_repeat 2 132 0 1390 310 66 40 chr2 192952482 192953604 -60302979 - L2 LINE L2 -13 3300 2136 620 316 108 10 chr2 192953633 192953921 -60302662 - L2 LINE L2 -1429 1885 1570 381 347 81 5 chr2 192954156 192954378 -60302205 + LTR16C LTR ERVL 227 465 -26 860 300 60 3 chr2 192954412 192954695 -60301888 - L2 LINE L2 -1772 1542 1244 223 233 50 0 chr2 192955936 192955996 -60300587 + GA-rich Low_complexity Low_complexity 4 66 0 303 184 114 112 chr2 192956634 192956762 -60299821 - FLAM SINE Alu 0 133 40 1905 148 0 23 chr2 192956838 192957168 -60299415 + AluSx SINE Alu 3 312 0 848 210 9 46 chr2 192957298 192957517 -60299066 + MER20 DNA MER1_type 5 215 -4 2175 140 19 25 chr2 192960187 192960552 -60296031 + THE1B LTR MaLR 2 364 0 304 257 14 14 chr2 192960552 192960626 -60295957 + MER81 DNA DNA 5 78 -36 180 365 91 24 chr2 192960640 192961023 -60295560 + L2 LINE L2 633 1041 -2273 209 173 39 0 chr2 192961811 192961863 -60294720 + (TA)n Simple_repeat Simple_repeat 1 54 0 25 31 0 0 chr2 192962657 192962689 -60293894 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr2 192962742 192962763 -60293820 + AT_rich Low_complexity Low_complexity 1 21 0 1861 238 126 31 chr2 192962821 192963593 -60292990 - L1MC4 LINE L1 -15 8027 7183 907 249 78 9 chr2 192963591 192963912 -60292671 + L1MC4 LINE L1 6827 7169 -873 * 352 367 28 73 chr2 192964967 192965215 -60291368 + L2 LINE L2 2837 3073 -199 204 323 0 0 chr2 192965366 192965428 -60291155 + L2 LINE L2 3206 3267 -5 273 284 51 32 chr2 192966912 192967077 -60289506 - MIR SINE MIR -45 217 50 187 322 105 35 chr2 192968377 192968548 -60288035 - L2 LINE L2 -977 2337 2155 1801 159 7 10 chr2 192968603 192968905 -60287678 - AluJo SINE Alu 0 312 12 939 294 91 21 chr2 192969336 192969720 -60286863 + MLT1E2 LTR MaLR 207 617 -9 248 293 0 0 chr2 192969823 192969881 -60286702 + MIR SINE MIR 96 153 -55 524 232 8 0 chr2 192969976 192970101 -60286482 - L1PA15 LINE L1 -1118 5028 4903 5487 117 4 50 chr2 192970101 192971252 -60285331 + L1PA15 LINE L1 5051 6158 -7 1044 130 0 6 chr2 192971263 192971424 -60285159 + L1P4 LINE L1 5522 5681 -485 1988 134 0 0 chr2 192971601 192971914 -60284669 + AluSx SINE Alu 1 313 0 5373 167 18 36 chr2 192972016 192973286 -60283297 - L1MA5A LINE L1 -3 6294 5048 1592 203 85 13 chr2 192973279 192973752 -60282831 + L1 LINE L1 3020 3526 -2620 * 5843 122 39 0 chr2 192973754 192973891 -60282692 + L1PA11 LINE L1 4515 4645 -1529 186 43 0 0 chr2 192973891 192973914 -60282669 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5843 122 39 0 chr2 192973914 192975378 -60281205 + L1PA11 LINE L1 4645 6174 0 3744 185 10 6 chr2 192975382 192976113 -60280470 + L1 LINE L1 3510 4243 -1903 229 301 0 12 chr2 192976124 192976239 -60280344 + (TATG)n Simple_repeat Simple_repeat 1 113 0 7536 31 1 1 chr2 192976456 192977506 -60279077 + L1PA3 LINE L1 5106 6155 0 31 0 0 0 chr2 192977506 192977537 -60279046 + AT_rich Low_complexity Low_complexity 1 31 0 30 27 0 0 chr2 192977563 192977600 -60278983 + AT_rich Low_complexity Low_complexity 1 37 0 29 0 0 0 chr2 192977898 192977927 -60278656 + AT_rich Low_complexity Low_complexity 1 29 0 26 88 0 0 chr2 192979311 192979379 -60277204 + AT_rich Low_complexity Low_complexity 1 68 0 720 289 101 35 chr2 192979724 192980181 -60276402 - L1ME LINE L1 -348 5822 5336 349 261 35 28 chr2 192980217 192980359 -60276224 - L1ME LINE L1 -3785 2361 2219 6593 62 2 0 chr2 192980419 192981257 -60275326 - L1PA6 LINE L1 -3 6151 5312 5157 57 1 0 chr2 192981264 192981927 -60274656 - L1PA6 LINE L1 -1193 4953 4290 912 155 13 0 chr2 192981924 192982079 -60274504 + L1MA5A LINE L1 5801 5957 -340 * 4362 50 0 2 chr2 192982076 192982620 -60273963 + L1P LINE L1 3758 4300 -1846 22 80 0 0 chr2 192982702 192982752 -60273831 + AT_rich Low_complexity Low_complexity 1 50 0 354 331 15 44 chr2 192983158 192983294 -60273289 - L2 LINE L2 0 3272 3141 21 0 0 0 chr2 192983688 192983709 -60272874 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr2 192984815 192984845 -60271738 + AT_rich Low_complexity Low_complexity 1 30 0 211 111 22 22 chr2 192985343 192985388 -60271195 + GA-rich Low_complexity Low_complexity 3 47 0 24 32 0 0 chr2 192985450 192985481 -60271102 + AT_rich Low_complexity Low_complexity 1 31 0 271 232 18 9 chr2 192985648 192985760 -60270823 + (TA)n Simple_repeat Simple_repeat 1 113 0 386 323 32 32 chr2 192986424 192986579 -60270004 + MIR3 SINE MIR 40 194 -14 2223 209 20 36 chr2 192986636 192987304 -60269279 - L1MB2 LINE L1 -2 6169 5555 5346 152 24 5 chr2 192988005 192988930 -60267653 - L1PA16 LINE L1 -8 6158 5217 26 0 0 0 chr2 192989131 192989157 -60267426 + AT_rich Low_complexity Low_complexity 1 26 0 1798 148 101 44 chr2 192989336 192989741 -60266842 - MSTA LTR MaLR 0 428 1 336 399 89 6 chr2 192989830 192990156 -60266427 - L2 LINE L2 -534 2780 2428 230 254 51 0 chr2 192991760 192991819 -60264764 - L3 LINE CR1 -2 1575 1514 950 306 135 51 chr2 192992649 192993495 -60263088 + HAL1 LINE L1 2 918 -1589 710 274 186 9 chr2 192993476 192993906 -60262677 + HAL1 LINE L1 1379 1884 -623 * 214 175 16 32 chr2 192994056 192994119 -60262464 + (TA)n Simple_repeat Simple_repeat 2 63 0 3000 246 52 17 chr2 192994130 192995012 -60261571 + L1MD2 LINE L1 5445 6357 -2 363 270 39 45 chr2 192995138 192995316 -60261267 + HAL1 LINE L1 2226 2402 -105 248 326 67 11 chr2 192995938 192996027 -60260556 + L2 LINE L2 3210 3303 -10 4766 191 40 7 chr2 192996112 192997195 -60259388 - L1 LINE L1 -1125 5021 3903 1322 178 23 11 chr2 192997296 192997560 -60259023 + MER61A LTR ERV1 77 343 0 2668 172 25 6 chr2 192997561 192998085 -60258498 + L1MB8 LINE L1 5640 6173 -5 481 269 61 45 chr2 192998087 192998276 -60258307 + L1MC4a LINE L1 5811 6006 -1802 2073 104 0 63 chr2 192998276 192998594 -60257989 + AluSx SINE Alu 1 298 -14 481 269 61 45 chr2 192998594 192998649 -60257934 + L1MC4a LINE L1 6006 6059 -1749 1352 146 55 0 chr2 192998753 192998973 -60257610 - MER34C LTR ERV1 -353 232 1 689 215 103 90 chr2 192999055 192999376 -60257207 + MER34C LTR ERV1 36 360 -225 2800 162 59 8 chr2 192999420 192999914 -60256669 - LTR26E LTR ERV1 0 622 104 1127 186 4 30 chr2 193000103 193000340 -60256243 - AluJo SINE Alu -19 293 63 3499 109 187 74 chr2 193000422 193001659 -60254924 - pTR5 LTR ERV1 0 2438 913 243 0 0 0 chr2 193001912 193001939 -60254644 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 23 0 0 0 chr2 193002016 193002039 -60254544 + AT_rich Low_complexity Low_complexity 1 23 0 4335 186 10 19 chr2 193003350 193004572 -60252011 - MER52A-int LTR ERV1 -2179 4817 1224 4432 185 48 54 chr2 193004582 193005704 -60250879 - MER52A-int LTR ERV1 -393 4824 689 3725 136 14 2 chr2 193005704 193006277 -60250306 - MER52A-int LTR ERV1 -4814 2277 1698 3345 153 18 26 chr2 193006400 193006969 -60249614 - MER52A-int LTR ERV1 -6527 564 1 3521 203 26 16 chr2 193006969 193008238 -60248345 - MER52A LTR ERV1 0 1755 374 826 105 13 13 chr2 193008286 193008517 -60248066 + (TA)n Simple_repeat Simple_repeat 1 231 0 198 143 0 0 chr2 193009173 193009208 -60247375 + (TA)n Simple_repeat Simple_repeat 1 35 0 1391 238 26 1 chr2 193009343 193009790 -60246793 + L1M3 LINE L1 5025 5490 -678 360 0 0 0 chr2 193009790 193009830 -60246753 + (TCTA)n Simple_repeat Simple_repeat 1 40 0 1391 238 26 1 chr2 193009830 193009928 -60246655 + L1M3 LINE L1 5490 5584 -584 28 29 0 0 chr2 193010346 193010381 -60246202 + AT_rich Low_complexity Low_complexity 1 35 0 216 376 45 25 chr2 193010439 193010596 -60245987 - L3 LINE CR1 -1379 198 39 266 228 0 0 chr2 193011503 193011560 -60245023 + MIR SINE MIR 98 154 -108 1351 221 46 79 chr2 193011914 193012434 -60244149 + MLT1D LTR MaLR 3 505 0 369 0 0 0 chr2 193012922 193012963 -60243620 + (CA)n Simple_repeat Simple_repeat 2 42 0 221 282 84 0 chr2 193013282 193013353 -60243230 + L2 LINE L2 3233 3309 -4 7357 206 99 17 chr2 193014443 193016064 -60240519 - MER52A LTR ERV1 0 1755 1 1528 123 22 6 chr2 193016064 193016364 -60240219 - MER52A-int LTR ERV1 0 7091 4918 776 137 0 29 chr2 193016361 193016500 -60240083 - MER50-int LTR ERV1 -1143 6062 5928 * 4515 139 30 9 chr2 193016483 193017291 -60239292 - MER50-int LTR ERV1 -2526 5011 4187 764 236 93 0 chr2 193018222 193018404 -60238179 - MLT1B LTR MaLR -2 388 190 1936 172 21 21 chr2 193019090 193019473 -60237110 + L1PA16 LINE L1 5782 6164 -2 529 246 173 16 chr2 193019768 193019959 -60236624 + MIR SINE MIR 20 240 -22 24 0 0 0 chr2 193019976 193020000 -60236583 + AT_rich Low_complexity Low_complexity 1 24 0 310 336 201 6 chr2 193020020 193020356 -60236227 + L2 LINE L2 2681 3084 -229 743 341 10 10 chr2 193020468 193020773 -60235810 + L1MEc LINE L1 112 416 -5980 551 270 26 7 chr2 193021123 193021275 -60235308 - MLT1A2 LTR MaLR 0 390 236 228 310 23 41 chr2 193021411 193021582 -60235001 - LTR30 LTR ERV1 -204 518 351 223 214 18 0 chr2 193021712 193021768 -60234815 + (TTA)n Simple_repeat Simple_repeat 3 59 0 670 228 51 100 chr2 193021790 193022046 -60234537 - MLT1A2 LTR MaLR -151 239 1 465 286 74 87 chr2 193022073 193023045 -60233538 + L1MEc LINE L1 820 1778 -4618 2419 278 158 19 chr2 193023102 193024661 -60231922 + L1M4 LINE L1 3044 4820 -1326 424 206 140 9 chr2 193024747 193024854 -60231729 + MLT1E LTR MaLR 7 127 -466 1248 224 3 37 chr2 193024860 193025159 -60231424 + AluJo SINE Alu 3 291 -21 729 193 14 14 chr2 193025161 193025448 -60231135 + GA-rich Low_complexity Low_complexity 1 287 0 307 209 45 0 chr2 193025459 193025569 -60231014 + GA-rich Low_complexity Low_complexity 2 116 0 1234 269 93 22 chr2 193025572 193025989 -60230594 + MLT1E LTR MaLR 114 520 -35 837 296 28 55 chr2 193026024 193026483 -60230100 - L1ME3A LINE L1 -142 6028 5582 333 226 0 6 chr2 193026632 193026718 -60229865 + L1MB5 LINE L1 5599 5681 -503 6564 31 0 37 chr2 193027124 193027952 -60228631 + L1PA3 LINE L1 5356 6152 -3 1182 224 87 31 chr2 193028890 193029236 -60227347 + Tigger7 DNA MER2_type 2 2491 0 2624 244 21 1 chr2 193030023 193030741 -60225842 - L1M4 LINE L1 -2780 3366 2635 1474 229 56 18 chr2 193030742 193031192 -60225391 - MLT1C LTR MaLR 0 467 1 379 304 25 25 chr2 193031206 193031364 -60225219 + L2 LINE L2 3156 3313 0 2843 173 4 6 chr2 193032033 193032531 -60224052 + LOR1a LTR ERV1 1 497 0 26 30 0 0 chr2 193032538 193032571 -60224012 + AT_rich Low_complexity Low_complexity 1 33 0 1591 205 0 10 chr2 193032684 193032986 -60223597 + AluJb SINE Alu 5 303 -9 25 0 0 0 chr2 193033892 193033917 -60222666 + AT_rich Low_complexity Low_complexity 1 25 0 2727 256 31 84 chr2 193033997 193035584 -60220999 + L1M4 LINE L1 2384 3886 -2260 27 29 0 0 chr2 193035586 193035620 -60220963 + AT_rich Low_complexity Low_complexity 1 34 0 539 288 48 22 chr2 193035680 193035909 -60220674 - L1M4 LINE L1 -2536 3610 3376 207 0 0 0 chr2 193035912 193035935 -60220648 + (CA)n Simple_repeat Simple_repeat 2 24 0 447 19 0 0 chr2 193035935 193035987 -60220596 + (TATATG)n Simple_repeat Simple_repeat 2 53 0 208 188 21 0 chr2 193036019 193036067 -60220516 + (TA)n Simple_repeat Simple_repeat 1 49 0 674 258 54 32 chr2 193036067 193036346 -60220237 + L1M4 LINE L1 4388 4672 -1474 25 31 0 0 chr2 193037555 193037587 -60218996 + AT_rich Low_complexity Low_complexity 1 32 0 1565 174 73 23 chr2 193037629 193037973 -60218610 + L1MB5 LINE L1 5806 6166 -8 280 229 79 174 chr2 193038549 193038802 -60217781 - MLT1J LTR MaLR -130 381 153 345 350 81 0 chr2 193039065 193039188 -60217395 - L2 LINE L2 -1 3312 3180 261 329 6 87 chr2 193039876 193040037 -60216546 + L2 LINE L2 3125 3272 0 2429 52 0 19 chr2 193040637 193040944 -60215639 + AluY SINE Alu 1 301 -10 448 296 21 0 chr2 193041381 193041523 -60215060 + MIR SINE MIR 118 262 0 21 36 0 0 chr2 193042592 193042620 -60213963 + AT_rich Low_complexity Low_complexity 1 28 0 26 88 0 0 chr2 193042733 193042801 -60213782 + AT_rich Low_complexity Low_complexity 1 68 0 385 78 0 0 chr2 193043830 193043881 -60212702 + MLT2A2 LTR ERVL 1 51 -402 7031 116 10 8 chr2 193043881 193044908 -60211675 + HERVL LTR ERVL 3616 4644 -1010 3195 155 73 86 chr2 193044908 193045914 -60210669 - MER52C LTR ERV1 -2 1276 1 7119 106 8 6 chr2 193045914 193046634 -60209949 + HERVL LTR ERVL 4639 5363 -291 2259 114 0 0 chr2 193046634 193046942 -60209641 - AluSg SINE Alu -2 308 1 7119 106 8 6 chr2 193046942 193047235 -60209348 + HERVL LTR ERVL 5363 5654 0 602 186 109 13 chr2 193047095 193047251 -60209332 + Ricksha DNA DNA 194 364 -2882 * 2651 3 0 0 chr2 193047357 193047646 -60208937 - AluYa5 SINE Alu -22 289 1 27 0 0 0 chr2 193048031 193048058 -60208525 + AT_rich Low_complexity Low_complexity 1 27 0 690 241 101 34 chr2 193048088 193048325 -60208258 + MIR SINE MIR 10 262 0 21 36 0 0 chr2 193048395 193048423 -60208160 + AT_rich Low_complexity Low_complexity 1 28 0 319 257 46 28 chr2 193048426 193048535 -60208048 - MIR SINE MIR -48 214 104 2226 45 52 14 chr2 193049345 193049635 -60206948 - AluY SINE Alu -8 303 3 282 302 32 55 chr2 193049706 193049865 -60206718 - MLT1K LTR MaLR -22 593 412 1112 277 45 52 chr2 193050167 193050885 -60205698 - L1M4 LINE L1 -1553 4593 3881 454 199 87 114 chr2 193051095 193051488 -60205095 - L1M4 LINE L1 -2956 3190 2809 226 319 0 0 chr2 193051563 193051632 -60204951 + (CA)n Simple_repeat Simple_repeat 2 70 0 259 318 113 26 chr2 193052798 193052949 -60203634 - MIR3 SINE MIR -7 201 38 243 299 58 11 chr2 193053154 193053241 -60203342 + L2 LINE L2 3182 3272 0 1052 284 46 7 chr2 193053296 193053695 -60202888 + L1ME1 LINE L1 5717 6099 -67 37 0 0 0 chr2 193053737 193053774 -60202809 + AT_rich Low_complexity Low_complexity 1 37 0 709 276 33 33 chr2 193053891 193054163 -60202420 - MLT2C1 LTR ERVL 0 397 126 1555 105 9 0 chr2 193055225 193055454 -60201129 + L1PA8 LINE L1 5940 6170 -2 1302 180 39 134 chr2 193055687 193056171 -60200412 - MLT2A2 LTR ERVL 0 453 16 1206 216 26 75 chr2 193056181 193056570 -60200013 + L1MC3 LINE L1 661 1030 -5015 1455 143 238 12 chr2 193056571 193056907 -60199676 - MSTA LTR MaLR -16 412 1 1509 209 55 65 chr2 193056912 193057361 -60199222 + L1MC3 LINE L1 1038 1481 -5083 2578 94 16 8 chr2 193057361 193057733 -60198850 - THE1C LTR MaLR 0 375 1 1509 209 55 65 chr2 193057733 193057849 -60198734 + L1MC3 LINE L1 1481 1597 -4967 319 79 0 5 chr2 193057850 193057903 -60198680 + Alu SINE Alu 1 40 -261 2093 105 0 10 chr2 193057903 193058197 -60198386 + AluSc SINE Alu 13 303 -6 249 250 0 14 chr2 193058230 193058302 -60198281 + L1MC3 LINE L1 1651 1721 -4843 898 193 74 59 chr2 193058304 193058506 -60198077 + AluJb SINE Alu 3 207 -105 752 219 27 0 chr2 193058514 193058701 -60197882 + L1MC3 LINE L1 2885 3076 -3488 2913 228 22 17 chr2 193058704 193059458 -60197125 + L1MC3 LINE L1 6056 6813 -1390 1430 164 125 17 chr2 193059464 193059832 -60196751 - MSTB1 LTR MaLR 0 457 1 3617 179 163 93 chr2 193059862 193060478 -60196105 + L1MC3 LINE L1 6874 7445 -758 231 278 22 11 chr2 193060478 193060568 -60196015 + MLT1F1 LTR MaLR 35 125 -442 3617 179 163 93 chr2 193060568 193061098 -60195485 + L1MC3 LINE L1 7445 8196 -7 23 54 0 0 chr2 193061457 193061494 -60195089 + AT_rich Low_complexity Low_complexity 1 37 0 23 33 0 0 chr2 193062603 193062633 -60193950 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 193064202 193064223 -60192360 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 193064299 193064328 -60192255 + AT_rich Low_complexity Low_complexity 1 29 0 35 24 0 0 chr2 193064368 193064410 -60192173 + AT_rich Low_complexity Low_complexity 1 42 0 1720 197 125 4 chr2 193064840 193065714 -60190869 + L1MC2 LINE L1 5343 6319 -25 25 0 0 0 chr2 193065720 193065745 -60190838 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr2 193066445 193066473 -60190110 + AT_rich Low_complexity Low_complexity 1 28 0 669 176 19 146 chr2 193066714 193066858 -60189725 + MER5A DNA MER1_type 7 119 -70 5518 138 10 0 chr2 193066858 193067815 -60188768 - L1PA14 LINE L1 0 6161 5200 669 176 19 146 chr2 193067815 193067875 -60188708 + MER5A DNA MER1_type 119 185 -4 1105 235 71 11 chr2 193068230 193068349 -60188234 + AluJb SINE Alu 1 111 -191 200 59 29 0 chr2 193068349 193068383 -60188200 + (TAA)n Simple_repeat Simple_repeat 2 36 0 1105 235 71 11 chr2 193068383 193068531 -60188052 + AluJb SINE Alu 111 284 -18 304 250 0 0 chr2 193068554 193068622 -60187961 - L1MC4 LINE L1 -1339 6703 6636 2326 65 0 26 chr2 193069140 193069449 -60187134 + AluY SINE Alu 1 301 -10 655 309 60 54 chr2 193069670 193070019 -60186564 + MLT1J LTR MaLR 18 368 -143 310 360 20 7 chr2 193070292 193070445 -60186138 - L2 LINE L2 0 3313 3159 566 229 0 8 chr2 193070816 193070947 -60185636 - FLAM_C SINE Alu -1 142 13 386 307 71 20 chr2 193071010 193071264 -60185319 - L1ME LINE L1 -320 5801 5535 3967 146 9 7 chr2 193071970 193072648 -60183935 - L1PA16 LINE L1 0 6166 5488 27 73 0 0 chr2 193072826 193072881 -60183702 + AT_rich Low_complexity Low_complexity 1 55 0 21 0 0 0 chr2 193073135 193073156 -60183427 + AT_rich Low_complexity Low_complexity 1 21 0 776 247 21 11 chr2 193073549 193073735 -60182848 + MLT1A2 LTR MaLR 187 374 0 619 249 161 57 chr2 193074084 193074505 -60182078 + L2 LINE L2 1875 2339 -975 328 279 27 103 chr2 193075037 193075299 -60181284 - L1ME LINE L1 -358 5804 5563 199 354 26 26 chr2 193075807 193075920 -60180663 - MIR3 SINE MIR -4 204 92 21 0 0 0 chr2 193077798 193077819 -60178764 + AT_rich Low_complexity Low_complexity 1 21 0 26 30 0 0 chr2 193078156 193078189 -60178394 + AT_rich Low_complexity Low_complexity 1 33 0 317 287 119 98 chr2 193079968 193080396 -60176187 + L1M2 LINE L1 488 924 -5925 * 320 306 141 91 chr2 193080071 193080675 -60175908 - L1M2 LINE L1 -5630 1219 586 23 0 0 0 chr2 193083255 193083278 -60173305 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr2 193083357 193083381 -60173202 + AT_rich Low_complexity Low_complexity 1 24 0 24 53 0 0 chr2 193083585 193083623 -60172960 + AT_rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr2 193084272 193084295 -60172288 + AT_rich Low_complexity Low_complexity 1 23 0 198 158 123 35 chr2 193084884 193084941 -60171642 - L2 LINE L2 0 3313 3252 2534 44 0 13 chr2 193085876 193086191 -60170392 - AluY SINE Alu 0 311 1 1493 182 11 66 chr2 193087153 193087516 -60169067 - MER2 DNA MER2_type -1 343 1 1605 209 30 25 chr2 193087844 193087881 -60168702 + MLT2C1 LTR ERVL 3 38 -359 1902 114 75 36 chr2 193087881 193088240 -60168343 - THE1C LTR MaLR -2 373 1 1605 209 30 25 chr2 193088240 193088551 -60168032 + MLT2C1 LTR ERVL 38 356 -41 330 26 0 0 chr2 193088551 193088590 -60167993 + (CA)n Simple_repeat Simple_repeat 2 40 0 1605 209 30 25 chr2 193088590 193088633 -60167950 + MLT2C1 LTR ERVL 356 397 0 2344 99 15 84 chr2 193088986 193089389 -60167194 - THE1C LTR MaLR 0 375 1 1325 275 40 47 chr2 193089538 193089655 -60166928 - MER90 LTR ERV1 0 575 459 2827 3 0 0 chr2 193089655 193089963 -60166620 - AluYa5 SINE Alu -3 308 1 1325 275 40 47 chr2 193089963 193090424 -60166159 - MER90 LTR ERV1 -116 459 1 1196 300 73 27 chr2 193090495 193090971 -60165612 - L2 LINE L2 -2769 545 48 1562 215 17 20 chr2 193091204 193091562 -60165021 - MLT1A1 LTR MaLR -8 357 1 1580 183 59 56 chr2 193091626 193092052 -60164531 + MSTC LTR MaLR 2 428 0 1611 171 69 17 chr2 193092683 193093029 -60163554 - MLT1A1 LTR MaLR 0 365 2 1857 95 15 23 chr2 193094154 193094417 -60162166 - AluSq SINE Alu -16 297 37 245 246 0 0 chr2 193094973 193095038 -60161545 + CT-rich Low_complexity Low_complexity 2 66 0 6433 73 3 58 chr2 193095404 193097101 -60159482 + L1PA7 LINE L1 4392 6154 0 512 232 48 0 chr2 193097106 193097231 -60159352 - MER94 DNA DNA -2 132 2 22 0 0 0 chr2 193097233 193097255 -60159328 + AT_rich Low_complexity Low_complexity 1 22 0 301 210 16 0 chr2 193097971 193098033 -60158550 + MIR SINE MIR 77 139 -123 233 296 70 0 chr2 193098145 193098216 -60158367 + MIR SINE MIR 166 241 -21 214 351 78 19 chr2 193098460 193098614 -60157969 - MER5A DNA MER1_type -4 185 23 25 65 0 0 chr2 193099258 193099304 -60157279 + AT_rich Low_complexity Low_complexity 1 46 0 329 289 72 13 chr2 193099540 193099692 -60156891 - MIR SINE MIR -16 246 86 458 227 18 9 chr2 193100243 193100353 -60156230 - MER8 DNA MER2_type -128 111 1 257 218 172 35 chr2 193101351 193101438 -60155145 - MIR SINE MIR -98 164 66 197 278 19 0 chr2 193103267 193103321 -60153262 - L2 LINE L2 -4 3309 3255 314 237 17 85 chr2 193103366 193103484 -60153099 + Charlie7 DNA MER1_type 1 110 -2502 265 245 0 0 chr2 193103814 193103867 -60152716 - MIR SINE MIR -203 59 7 562 110 50 0 chr2 193105920 193106020 -60150563 + L1MB4 LINE L1 6076 6180 0 2406 77 0 6 chr2 193107573 193107886 -60148697 - AluY SINE Alu 0 311 1 1954 118 16 3 chr2 193109751 193110055 -60146528 + AluSp SINE Alu 1 308 -5 31 76 0 0 chr2 193110241 193110307 -60146276 + AT_rich Low_complexity Low_complexity 1 66 0 258 329 58 22 chr2 193110478 193110615 -60145968 - L1ME LINE L1 -515 5649 5508 307 316 89 47 chr2 193110793 193110983 -60145600 - L1ME LINE L1 -801 5345 5148 442 182 0 0 chr2 193111017 193111105 -60145478 + L1M4 LINE L1 2969 3056 -3090 261 326 132 0 chr2 193111950 193112079 -60144504 - MIR3 SINE MIR -27 181 36 27 29 0 0 chr2 193112578 193112612 -60143971 + AT_rich Low_complexity Low_complexity 1 34 0 308 324 28 35 chr2 193113808 193113950 -60142633 + L1ME1 LINE L1 5504 5644 -477 22 0 0 0 chr2 193113976 193113998 -60142585 + AT_rich Low_complexity Low_complexity 1 22 0 1645 131 105 4 chr2 193114127 193114394 -60142189 - AluSx SINE Alu -16 296 3 605 230 84 34 chr2 193115495 193115673 -60140910 + MER69 DNA AcHobo 8 194 -2332 293 255 10 134 chr2 193115761 193116038 -60140545 + MER69 DNA AcHobo 927 1168 -1358 2002 178 40 83 chr2 193116038 193116566 -60140017 + MLT1D LTR MaLR 1 505 0 293 255 10 134 chr2 193116566 193116578 -60140005 + MER69 DNA AcHobo 1168 1180 -1346 260 256 131 6 chr2 193116578 193116738 -60139845 + MER69 DNA AcHobo 2347 2526 0 21 0 0 0 chr2 193117267 193117288 -60139295 + AT_rich Low_complexity Low_complexity 1 21 0 387 56 0 0 chr2 193118153 193118207 -60138376 + (TG)n Simple_repeat Simple_repeat 2 55 0 814 211 33 0 chr2 193118330 193118510 -60138073 - L1MC1 LINE L1 -149 6184 5999 2224 115 0 0 chr2 193120671 193120976 -60135607 - AluSx SINE Alu -7 305 1 1356 86 0 11 chr2 193121123 193121310 -60135273 + AluY SINE Alu 103 287 -24 38 0 0 0 chr2 193121311 193121349 -60135234 + AT_rich Low_complexity Low_complexity 1 38 0 435 120 11 22 chr2 193121492 193121584 -60134999 + (GGA)n Simple_repeat Simple_repeat 3 93 0 1148 257 87 40 chr2 193121690 193122242 -60134341 + L1M4 LINE L1 3530 4107 -2039 1966 148 7 0 chr2 193122255 193122553 -60134030 - AluSg SINE Alu -10 300 1 764 236 57 14 chr2 193122580 193122887 -60133696 + L1ME1 LINE L1 5808 6333 -1 182 88 0 29 chr2 193123648 193123682 -60132901 + (TTTCC)n Simple_repeat Simple_repeat 1 33 0 271 310 14 78 chr2 193124565 193124707 -60131876 + MIR SINE MIR 51 183 -79 198 176 0 0 chr2 193125028 193125079 -60131504 + (TA)n Simple_repeat Simple_repeat 1 51 0 29 47 0 0 chr2 193125100 193125143 -60131440 + AT_rich Low_complexity Low_complexity 1 43 0 291 128 0 0 chr2 193125207 193125254 -60131329 + L1MA2 LINE L1 6254 6300 -4 21 36 0 0 chr2 193125529 193125557 -60131026 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 193125735 193125759 -60130824 + AT_rich Low_complexity Low_complexity 1 24 0 11759 215 21 24 chr2 193126976 193129411 -60127172 + L1PA16 LINE L1 1 2443 -4426 189 0 0 0 chr2 193129411 193129432 -60127151 + (GAAAA)n Simple_repeat Simple_repeat 4 24 0 11759 215 21 24 chr2 193129432 193133754 -60122829 + L1PA16 LINE L1 2443 6869 0 23 78 0 0 chr2 193133760 193133811 -60122772 + AT_rich Low_complexity Low_complexity 1 51 0 1791 137 84 37 chr2 193134007 193134413 -60122170 + THE1C LTR MaLR 3 428 0 2945 161 42 102 chr2 193134648 193135429 -60121154 - MER50 LTR ERV1 0 734 1 1277 233 70 11 chr2 193135436 193135847 -60120736 - MER89 LTR ERV1 -23 536 1 5455 232 61 5 chr2 193135847 193137176 -60119407 - MER89-int LTR ERV1 0 6801 5398 26 101 0 0 chr2 193137249 193137338 -60119245 + AT_rich Low_complexity Low_complexity 1 89 0 3232 188 26 3 chr2 193137371 193137976 -60118607 - MER89-int LTR ERV1 -4271 2530 1912 414 213 0 0 chr2 193137977 193138071 -60118512 + (CATATA)n Simple_repeat Simple_repeat 5 98 0 1731 156 101 9 chr2 193138071 193138398 -60118185 - MER89-int LTR ERV1 -4885 1916 1560 1307 216 4 11 chr2 193138413 193138686 -60117897 - AluJb SINE Alu -38 274 4 5856 197 37 52 chr2 193138699 193139504 -60117079 - MER89-int LTR ERV1 -5233 1568 793 1793 151 37 0 chr2 193139504 193139802 -60116781 + AluSx SINE Alu 1 309 -3 5856 197 37 52 chr2 193139802 193140410 -60116173 - MER89-int LTR ERV1 -6008 793 177 691 255 12 4 chr2 193140410 193140636 -60115947 - MER89 LTR ERV1 -232 327 1 194 349 15 15 chr2 193140653 193140719 -60115864 - MIR SINE MIR 0 262 197 238 179 36 0 chr2 193140758 193140814 -60115769 + (TA)n Simple_repeat Simple_repeat 1 58 0 291 289 84 74 chr2 193140814 193141004 -60115579 - MIR SINE MIR -57 205 14 951 153 13 0 chr2 193141258 193141408 -60115175 + FRAM SINE Alu 1 145 -31 22 35 0 0 chr2 193142344 193142373 -60114210 + AT_rich Low_complexity Low_complexity 1 29 0 674 267 93 38 chr2 193142635 193143111 -60113472 - LTR28 LTR ERV1 -137 499 1 292 364 73 20 chr2 193143127 193143374 -60113209 - L3 LINE CR1 -767 810 551 2846 182 108 49 chr2 193144313 193145072 -60111511 + MER52A LTR ERV1 1 901 -854 2066 239 18 44 chr2 193146773 193147341 -60109242 - MLT1E2 LTR MaLR -2 624 72 21 36 0 0 chr2 193147786 193147814 -60108769 + AT_rich Low_complexity Low_complexity 1 28 0 723 152 18 36 chr2 193149446 193149611 -60106972 - L1MA7 LINE L1 -1 6290 6129 288 167 30 30 chr2 193149613 193149679 -60106904 + L1MA9 LINE L1 5860 5925 -387 240 35 0 0 chr2 193151053 193151082 -60105501 + (CA)n Simple_repeat Simple_repeat 1 29 0 322 313 30 26 chr2 193151297 193151527 -60105056 - HAL1 LINE L1 -865 1642 1412 345 308 64 98 chr2 193151623 193152032 -60104551 - L1MEd LINE L1 -4918 1201 807 1903 106 28 25 chr2 193154038 193154321 -60102262 - AluSg SINE Alu 0 310 27 203 235 0 15 chr2 193154361 193154429 -60102154 + GA-rich Low_complexity Low_complexity 4 70 0 24 67 0 0 chr2 193155498 193155543 -60101040 + AT_rich Low_complexity Low_complexity 1 45 0 24 32 0 0 chr2 193156057 193156088 -60100495 + AT_rich Low_complexity Low_complexity 1 31 0 429 289 6 19 chr2 193156319 193156478 -60100105 + (TATG)n Simple_repeat Simple_repeat 4 160 0 604 308 36 36 chr2 193156867 193157091 -60099492 - MIR SINE MIR -18 244 21 198 143 0 0 chr2 193157664 193157699 -60098884 + (CA)n Simple_repeat Simple_repeat 1 35 0 28 48 0 0 chr2 193157830 193157872 -60098711 + AT_rich Low_complexity Low_complexity 1 42 0 34 0 0 0 chr2 193158215 193158249 -60098334 + AT_rich Low_complexity Low_complexity 1 34 0 329 269 94 20 chr2 193158413 193158562 -60098021 - MLT1L LTR MaLR -12 603 444 275 253 121 11 chr2 193158654 193158745 -60097838 - MLT1L LTR MaLR -367 248 148 22 0 0 0 chr2 193159133 193159155 -60097428 + AT_rich Low_complexity Low_complexity 1 22 0 4222 199 74 53 chr2 193160635 193162558 -60094025 + MER52A LTR ERV1 6 1755 0 810 186 42 0 chr2 193162771 193162933 -60093650 + MER97a DNA MER1_type? 58 226 -668 1472 215 134 41 chr2 193162933 193163502 -60093081 + MER52A LTR ERV1 1 706 -1049 508 231 0 8 chr2 193163500 193163617 -60092966 + MER52A LTR ERV1 1639 1754 -1 * 919 250 43 59 chr2 193163617 193163989 -60092594 + MER97a DNA MER1_type? 222 587 -307 1353 195 27 4 chr2 193164060 193164317 -60092266 + AluJb SINE Alu 36 298 -14 225 103 0 0 chr2 193164317 193164356 -60092227 + Alu SINE Alu 264 302 0 1992 146 60 3 chr2 193165880 193166229 -60090354 - L1PA16 LINE L1 -13 6153 5785 5973 196 207 26 chr2 193166245 193167687 -60088896 - MER52A LTR ERV1 -51 1704 1 2919 203 35 1 chr2 193167711 193168625 -60087958 - L1PA16 LINE L1 -378 5788 4851 800 240 18 9 chr2 193168885 193169102 -60087481 + L1MB4 LINE L1 5962 6180 0 2203 116 0 0 chr2 193169137 193169440 -60087143 + AluSx SINE Alu 1 303 -9 273 57 0 0 chr2 193169645 193169680 -60086903 + (TG)n Simple_repeat Simple_repeat 2 36 0 199 360 32 28 chr2 193170635 193170756 -60085827 + MIR SINE MIR 19 141 -67 22 35 0 0 chr2 193172756 193172785 -60083798 + AT_rich Low_complexity Low_complexity 1 29 0 25 83 0 0 chr2 193173062 193173122 -60083461 + AT_rich Low_complexity Low_complexity 1 60 0 275 324 88 0 chr2 193174571 193174673 -60081910 - MIR3 SINE MIR -11 197 87 1796 138 9 63 chr2 193175230 193175549 -60081034 - AluSx SINE Alu -10 302 1 285 305 0 0 chr2 193175879 193175961 -60080622 - LTR16A1 LTR ERVL 0 457 376 349 242 141 0 chr2 193175978 193176106 -60080477 + MER53 DNA DNA 43 188 -1 301 253 110 65 chr2 193176109 193176263 -60080320 - LTR16A1 LTR ERVL -75 382 222 2453 60 0 16 chr2 193176480 193176796 -60079787 + AluY SINE Alu 1 311 0 278 123 0 88 chr2 193176809 193176866 -60079717 - FAM SINE Alu -13 166 115 798 211 0 7 chr2 193176869 193177016 -60079567 - AluJo SINE Alu -164 148 3 288 242 109 31 chr2 193178154 193178282 -60078301 - L1ME4a LINE L1 -2 6119 5982 22 0 0 0 chr2 193178409 193178431 -60078152 + AT_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr2 193178779 193178815 -60077768 + AT_rich Low_complexity Low_complexity 1 36 0 732 321 87 41 chr2 193179850 193180438 -60076145 - MLT1L LTR MaLR 0 615 1 444 309 81 73 chr2 193181015 193181274 -60075309 - MIR SINE MIR 0 262 2 994 157 6 6 chr2 193182177 193182355 -60074228 - L1MA6 LINE L1 -55 6245 6068 246 100 0 67 chr2 193182354 193182414 -60074169 + L1MA6 LINE L1 6244 6299 -1 * 216 0 0 0 chr2 193183381 193183405 -60073178 + (TAAAAA)n Simple_repeat Simple_repeat 5 28 0 2205 77 40 0 chr2 193184721 193185020 -60071563 + AluY SINE Alu 1 311 0 1865 114 4 4 chr2 193185456 193185728 -60070855 - AluSp SINE Alu -17 296 25 215 133 22 0 chr2 193187009 193187054 -60069529 + (CA)n Simple_repeat Simple_repeat 1 46 0 2817 193 143 30 chr2 193187183 193187861 -60068722 - ERVL LTR ERVL -1573 4191 3437 5315 133 48 11 chr2 193188600 193189623 -60066960 - L1PA16 LINE L1 -9 6157 5088 1289 218 11 48 chr2 193189611 193189969 -60066614 + L1 LINE L1 4654 4998 -1148 * 254 214 22 45 chr2 193190259 193190348 -60066235 + L2 LINE L2 2982 3068 -245 198 0 0 0 chr2 193190700 193190722 -60065861 + (TCTA)n Simple_repeat Simple_repeat 1 22 0 289 336 62 24 chr2 193190791 193191002 -60065581 + L3 LINE CR1 1336 1554 -23 43 71 0 0 chr2 193191093 193191178 -60065405 + AT_rich Low_complexity Low_complexity 1 85 0 389 263 55 93 chr2 193191444 193191733 -60064850 - L1ME1 LINE L1 -4 6162 5885 4591 200 30 3 chr2 193191802 193193521 -60063062 - L1MB1 LINE L1 -1 6403 4633 2152 258 52 13 chr2 193193566 193194502 -60062081 - L1MB1 LINE L1 -4516 1797 777 1288 204 3 65 chr2 193196692 193197001 -60059582 - AluJo SINE Alu -22 290 1 210 333 56 0 chr2 193197149 193197239 -60059344 + L2 LINE L2 3219 3313 0 1152 109 0 0 chr2 193198978 193199162 -60057421 - L1MA4A LINE L1 -1 6302 6119 6229 175 29 20 chr2 193199162 193199303 -60057280 + L1MA4A LINE L1 4031 4169 -2134 1960 163 73 14 chr2 193199303 193199647 -60056936 - THE1B LTR MaLR 0 364 1 10954 109 4 16 chr2 193199647 193201242 -60055341 - THE1B-int LTR MaLR 0 1580 5 1796 184 73 15 chr2 193201247 193201590 -60054993 - THE1B LTR MaLR -1 363 1 6229 175 29 20 chr2 193201590 193203428 -60053155 + L1MA4A LINE L1 4172 6023 -280 241 258 86 21 chr2 193206436 193206529 -60050054 + MIR SINE MIR 86 184 -78 26 30 0 0 chr2 193206694 193206727 -60049856 + AT_rich Low_complexity Low_complexity 1 33 0 2919 215 121 25 chr2 193206810 193207651 -60048932 - L1MD2 LINE L1 -12 6347 5426 24 32 0 0 chr2 193208022 193208053 -60048530 + AT_rich Low_complexity Low_complexity 1 31 0 275 250 179 0 chr2 193209170 193209254 -60047329 - MIR SINE MIR -103 159 61 2437 167 39 10 chr2 193210132 193210618 -60045965 + L1MA8 LINE L1 5786 6285 -6 8486 224 29 59 chr2 193211508 193212261 -60044322 - L1MC1 LINE L1 0 6613 5839 2257 100 0 25 chr2 193212261 193212581 -60044002 + AluSq SINE Alu 1 312 -1 8486 224 29 59 chr2 193212581 193212865 -60043718 - L1MC1 LINE L1 -774 5839 5548 1710 183 0 19 chr2 193212865 193213176 -60043407 - AluJo SINE Alu -7 305 1 8486 224 29 59 chr2 193213176 193215389 -60041194 - L1MC1 LINE L1 -1065 5548 3366 679 175 97 26 chr2 193215389 193215543 -60041040 - AluJo SINE Alu -26 286 122 8486 224 29 59 chr2 193215543 193216515 -60040068 - L1MC1 LINE L1 -3247 3366 2366 2281 52 3 0 chr2 193216616 193216903 -60039680 + L1PA7 LINE L1 5866 6153 -1 2169 111 55 0 chr2 193217675 193218018 -60038565 + L1PA8A LINE L1 5767 6128 -3 361 285 48 71 chr2 193218096 193218345 -60038238 - L1M4 LINE L1 -1926 4220 3980 2234 98 0 16 chr2 193218345 193218661 -60037922 - AluY SINE Alu 0 311 1 361 285 48 71 chr2 193218661 193218765 -60037818 - L1M4 LINE L1 -2166 3980 3875 25 75 0 0 chr2 193218900 193218953 -60037630 + AT_rich Low_complexity Low_complexity 1 53 0 2247 109 0 7 chr2 193219144 193219447 -60037136 + AluSp SINE Alu 3 303 -10 1631 159 11 4 chr2 193220715 193220992 -60035591 - AluSx SINE Alu -33 279 1 299 283 85 19 chr2 193222152 193222258 -60034325 + MIR SINE MIR 79 191 -71 1604 277 67 35 chr2 193222326 193222954 -60033629 - MER77 LTR ERV1 -10 595 44 256 172 0 31 chr2 193223279 193223343 -60033240 + T-rich Low_complexity Low_complexity 1 62 0 25 51 0 0 chr2 193224007 193224046 -60032537 + AT_rich Low_complexity Low_complexity 1 39 0 185 196 18 0 chr2 193224074 193224130 -60032453 + (TATATG)n Simple_repeat Simple_repeat 2 58 0 260 313 58 91 chr2 193224400 193224643 -60031940 + L2 LINE L2 2321 2555 -759 23 0 0 0 chr2 193224982 193225005 -60031578 + AT_rich Low_complexity Low_complexity 1 23 0 269 267 25 109 chr2 193225374 193225556 -60031027 + MIR3 SINE MIR 14 188 -73 1894 186 17 6 chr2 193225618 193225979 -60030604 + MLT1A1 LTR MaLR 1 365 0 197 383 12 0 chr2 193227075 193227156 -60029427 + L2 LINE L2 3232 3313 0 1318 179 58 12 chr2 193227372 193227692 -60028891 - L1MA4 LINE L1 -45 6267 5943 2999 137 6 4 chr2 193227716 193228211 -60028372 - L1MA3 LINE L1 -10 6295 5800 320 208 0 0 chr2 193228551 193228623 -60027960 + LTR30 LTR ERV1 552 623 -99 204 40 0 0 chr2 193228623 193228648 -60027935 + (A)n Simple_repeat Simple_repeat 1 25 0 4841 198 46 3 chr2 193228980 193230907 -60025676 - L1PA8A LINE L1 -1 6130 4124 3172 199 25 29 chr2 193231796 193232549 -60024034 - L1MA10 LINE L1 -1 6333 5584 1214 250 30 0 chr2 193232556 193232860 -60023723 + L1M2 LINE L1 4872 5184 -962 1121 151 23 10 chr2 193232878 193233244 -60023339 + L1PB4 LINE L1 5082 5454 -702 2027 200 27 5 chr2 193233344 193233793 -60022790 + L1PB4 LINE L1 5695 6153 -3 1074 200 41 94 chr2 193233805 193234161 -60022422 + L1M2 LINE L1 5198 5534 -746 466 146 58 19 chr2 193235030 193235133 -60021450 + MER53 DNA DNA 1 107 -82 962 208 143 19 chr2 193235980 193236245 -60020338 - MSTA LTR MaLR -128 300 3 662 192 0 8 chr2 193237420 193237540 -60019043 - FLAM_C SINE Alu -10 123 5 238 273 0 45 chr2 193237856 193237944 -60018639 + (TATATG)n Simple_repeat Simple_repeat 6 89 0 552 317 95 23 chr2 193239519 193239740 -60016843 - MIR SINE MIR -21 241 5 269 186 68 37 chr2 193240155 193240316 -60016267 + (TATATG)n Simple_repeat Simple_repeat 1 166 0 643 220 138 0 chr2 193240437 193240655 -60015928 + L1MD3 LINE L1 7730 7977 -18 24 0 0 0 chr2 193240655 193240679 -60015904 + AT_rich Low_complexity Low_complexity 1 24 0 2280 65 49 8 chr2 193240794 193241174 -60015409 + LTR7 LTR ERV1 1 443 -7 1270 92 5 11 chr2 193241195 193241380 -60015203 - LTR7 LTR ERV1 -266 184 1 199 315 27 14 chr2 193242745 193242818 -60013765 - L2 LINE L2 -18 3295 3222 231 36 0 0 chr2 193243355 193243383 -60013200 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 421 300 0 0 chr2 193243397 193243497 -60013086 - L2 LINE L2 0 3313 3214 21 0 0 0 chr2 193243636 193243657 -60012926 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 193243748 193243771 -60012812 + AT_rich Low_complexity Low_complexity 1 23 0 921 214 25 10 chr2 193244300 193244501 -60012082 + MLT1B LTR MaLR 1 204 -186 190 326 58 12 chr2 193244631 193244717 -60011866 + L2 LINE L2 1812 1901 -1413 2446 76 3 0 chr2 193244793 193245097 -60011486 - AluY SINE Alu 0 311 7 23 68 0 0 chr2 193246100 193246144 -60010439 + AT_rich Low_complexity Low_complexity 1 44 0 1669 205 87 43 chr2 193246461 193246930 -60009653 + LTR2B LTR ERV1 1 490 0 23 54 0 0 chr2 193247370 193247407 -60009176 + AT_rich Low_complexity Low_complexity 1 37 0 511 182 10 25 chr2 193247775 193247973 -60008610 + L1MB2 LINE L1 5577 5741 -430 1477 229 48 21 chr2 193247978 193248353 -60008230 + MLT1B LTR MaLR 6 390 0 2159 176 26 0 chr2 193248353 193248768 -60007815 + L1MB2 LINE L1 5737 6162 -9 329 227 27 0 chr2 193249195 193249270 -60007313 - MER2 DNA MER2_type 0 345 269 204 200 0 0 chr2 193250804 193250849 -60005734 + (TATATG)n Simple_repeat Simple_repeat 1 45 0 206 264 19 0 chr2 193251104 193251157 -60005426 + (TATATG)n Simple_repeat Simple_repeat 4 57 0 1909 151 20 0 chr2 193251184 193251354 -60005229 - AluSg SINE Alu -6 304 124 189 0 0 0 chr2 193251354 193251375 -60005208 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1909 151 20 0 chr2 193251375 193251502 -60005081 - AluSg SINE Alu -186 124 1 27 81 0 0 chr2 193251789 193251851 -60004732 + AT_rich Low_complexity Low_complexity 1 62 0 314 90 39 13 chr2 193252735 193252813 -60003770 + (TA)n Simple_repeat Simple_repeat 1 80 0 850 274 55 15 chr2 193252814 193253142 -60003441 - L1ME2 LINE L1 -75 6089 5749 3371 128 6 2 chr2 193253332 193253854 -60002729 - L1PA16 LINE L1 -290 5876 5353 5932 109 14 14 chr2 193253855 193254813 -60001770 - L1PB1 LINE L1 -2 6149 5193 4533 239 17 4 chr2 193254866 193256220 -60000363 + L1PBa LINE L1 2778 4223 -2639 8037 185 57 16 chr2 193256220 193258287 -59998296 - L1PBa LINE L1 -2218 4644 2662 432 0 0 0 chr2 193258287 193258335 -59998248 + (TG)n Simple_repeat Simple_repeat 1 48 0 8037 185 57 16 chr2 193258335 193259564 -59997019 - L1PBa LINE L1 -4200 2662 6 1395 259 96 47 chr2 193259583 193259805 -59996778 - L1MCa LINE L1 -2294 4132 3922 1467 180 0 71 chr2 193259805 193260116 -59996467 - AluJb SINE Alu -15 297 9 1395 259 96 47 chr2 193260116 193260924 -59995659 - L1MCa LINE L1 -2504 3922 3051 831 276 103 27 chr2 193260932 193261551 -59995032 - L1MCa LINE L1 -4333 2274 1422 753 284 78 66 chr2 193263418 193263921 -59992662 + L1ME3A LINE L1 5505 6013 -157 663 258 11 37 chr2 193263925 193264115 -59992468 - MLT1E LTR MaLR -2 591 407 894 103 0 29 chr2 193264121 193264257 -59992326 + FLAM_C SINE Alu 11 142 -1 710 265 87 110 chr2 193264258 193264704 -59991879 - MLT1E LTR MaLR -150 443 8 2534 211 56 48 chr2 193264856 193265537 -59991046 - L1MB8 LINE L1 -88 6090 5405 203 61 30 0 chr2 193265546 193265579 -59991004 + (CA)n Simple_repeat Simple_repeat 2 35 0 280 222 22 33 chr2 193265579 193265669 -59990914 + L1MC4 LINE L1 6614 6702 -1340 228 268 0 0 chr2 193265672 193265728 -59990855 + (TA)n Simple_repeat Simple_repeat 2 57 0 2193 104 9 0 chr2 193266127 193266453 -59990130 + L1PB1 LINE L1 5821 6149 -2 21 36 0 0 chr2 193266453 193266481 -59990102 + AT_rich Low_complexity Low_complexity 1 28 0 292 338 68 20 chr2 193268659 193268807 -59987776 - L2 LINE L2 0 3313 3159 274 268 52 26 chr2 193269280 193269433 -59987150 + LTR37B LTR ERV1 110 266 -202 237 279 38 13 chr2 193269947 193270026 -59986557 - L2 LINE L2 0 3313 3233 225 356 0 0 chr2 193270417 193270507 -59986076 - L2 LINE L2 0 3272 3183 31 68 0 0 chr2 193270678 193270737 -59985846 + AT_rich Low_complexity Low_complexity 1 59 0 1749 216 32 68 chr2 193271123 193271627 -59984956 + MLT1D LTR MaLR 20 505 0 216 0 0 0 chr2 193271955 193271979 -59984604 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 180 377 14 14 chr2 193272499 193272568 -59984015 + MIR3 SINE MIR 11 79 -129 2046 170 24 5 chr2 193273532 193273915 -59982668 - MLT1B LTR MaLR 0 390 1 2556 110 0 131 chr2 193273951 193274462 -59982121 + MLT2A1 LTR ERVL 1 444 0 32 57 0 0 chr2 193274788 193274841 -59981742 + AT_rich Low_complexity Low_complexity 1 53 0 225 0 0 0 chr2 193274848 193274873 -59981710 + (T)n Simple_repeat Simple_repeat 1 25 0 40 37 0 0 chr2 193275678 193275732 -59980851 + AT_rich Low_complexity Low_complexity 1 54 0 216 0 0 0 chr2 193275739 193275763 -59980820 + (T)n Simple_repeat Simple_repeat 1 24 0 22 35 0 0 chr2 193276056 193276085 -59980498 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr2 193277873 193277905 -59978678 + AT_rich Low_complexity Low_complexity 1 32 0 366 277 25 19 chr2 193278257 193278416 -59978167 + (CATATA)n Simple_repeat Simple_repeat 2 161 0 355 218 99 14 chr2 193279431 193279573 -59977010 - L1MC3 LINE L1 -12 7773 7620 * 757 282 23 0 chr2 193279570 193279829 -59976754 - L1PA16 LINE L1 -14 6152 5888 9223 255 26 37 chr2 193279830 193283258 -59973325 - L1PA16 LINE L1 -373 5783 2409 2274 71 0 0 chr2 193283258 193283570 -59973013 - AluY SINE Alu 0 312 1 9223 255 26 37 chr2 193283570 193284162 -59972421 - L1PA16 LINE L1 -3747 2409 1812 5282 179 48 13 chr2 193284191 193285366 -59971217 - L1MC1 LINE L1 -1 6332 5122 2660 280 74 15 chr2 193285481 193286492 -59970091 - L1MCb LINE L1 -4971 1074 4 395 374 74 4 chr2 193286613 193286843 -59969740 + MIR SINE MIR 15 260 -2 651 295 61 47 chr2 193286877 193287240 -59969343 + L2 LINE L2 2864 3231 -82 425 285 71 80 chr2 193287468 193287636 -59968947 - MLT1D LTR MaLR -155 350 182 2096 92 0 11 chr2 193287636 193287917 -59968666 - AluSg SINE Alu -32 278 1 425 285 71 80 chr2 193287917 193288099 -59968484 - MLT1D LTR MaLR -323 182 3 501 285 159 0 chr2 193288176 193288327 -59968256 + MER5A DNA MER1_type 9 183 -6 678 245 19 0 chr2 193288667 193288826 -59967757 - MER5A DNA MER1_type -22 167 6 22 35 0 0 chr2 193291735 193291764 -59964819 + AT_rich Low_complexity Low_complexity 1 29 0 26 30 0 0 chr2 193292338 193292371 -59964212 + AT_rich Low_complexity Low_complexity 1 33 0 26 64 0 0 chr2 193292546 193292593 -59963990 + AT_rich Low_complexity Low_complexity 1 47 0 38 22 0 0 chr2 193292995 193293040 -59963543 + AT_rich Low_complexity Low_complexity 1 45 0 180 231 0 0 chr2 193293486 193293538 -59963045 + (TA)n Simple_repeat Simple_repeat 1 52 0 605 266 51 42 chr2 193293809 193294023 -59962560 + MER58A DNA MER1_type 9 224 0 2502 64 0 0 chr2 193294232 193294543 -59962040 - AluY SINE Alu 0 311 1 778 256 0 0 chr2 193295320 193295484 -59961099 + FAM SINE Alu 1 164 -11 216 0 0 0 chr2 193298358 193298382 -59958201 + (T)n Simple_repeat Simple_repeat 1 24 0 214 357 12 12 chr2 193298382 193298466 -59958117 + L2 LINE L2 3184 3267 -5 230 381 9 0 chr2 193298684 193298789 -59957794 + MIR3 SINE MIR 50 155 -53 22 56 0 0 chr2 193299836 193299872 -59956711 + AT_rich Low_complexity Low_complexity 1 36 0 22567 177 18 13 chr2 193301525 193306900 -59949683 + L1PA11 LINE L1 770 6169 -5 1273 199 25 108 chr2 193307362 193307759 -59948824 - MLT1A1 LTR MaLR 0 365 2 21 0 0 0 chr2 193308557 193308578 -59948005 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr2 193308634 193308666 -59947917 + AT_rich Low_complexity Low_complexity 1 32 0 300 255 180 25 chr2 193309138 193309299 -59947284 - MIR SINE MIR -49 213 28 1170 174 35 139 chr2 193310792 193311109 -59945474 + AluJo SINE Alu 1 284 -18 321 47 0 0 chr2 193311111 193311154 -59945429 + (CA)n Simple_repeat Simple_repeat 2 44 0 345 253 13 0 chr2 193312536 193312615 -59943968 + MER5A DNA MER1_type 30 109 -80 324 351 3 32 chr2 193313955 193314187 -59942396 - L1M4 LINE L1 -468 5710 5482 619 251 19 28 chr2 193314368 193314579 -59942004 + MER3 DNA MER1_type 1 209 0 1929 267 83 35 chr2 193314688 193314808 -59941775 - L1MC4 LINE L1 -564 7478 7365 572 129 0 0 chr2 193314808 193314893 -59941690 + L1PA7 LINE L1 6056 6140 -14 1929 267 83 35 chr2 193314893 193315679 -59940904 - L1MC4 LINE L1 -677 7365 6529 230 278 0 0 chr2 193316004 193316058 -59940525 - L2 LINE L2 -15 3257 3204 2784 166 8 6 chr2 193316130 193316607 -59939976 - MER66A LTR ERV1 0 478 1 533 301 124 0 chr2 193317014 193317200 -59939383 + MIR SINE MIR 51 259 -3 22 0 0 0 chr2 193317562 193317584 -59938999 + AT_rich Low_complexity Low_complexity 1 22 0 246 222 25 12 chr2 193317629 193317710 -59938873 + (TA)n Simple_repeat Simple_repeat 2 83 0 438 394 36 48 chr2 193317874 193318293 -59938290 + L2 LINE L2 2828 3241 -31 546 281 118 32 chr2 193319268 193319489 -59937094 + MIR SINE MIR 23 262 0 23 33 0 0 chr2 193320274 193320304 -59936279 + AT_rich Low_complexity Low_complexity 1 30 0 1938 130 21 3 chr2 193321026 193321311 -59935272 + AluSx SINE Alu 8 297 -15 23 33 0 0 chr2 193322609 193322639 -59933944 + AT_rich Low_complexity Low_complexity 1 30 0 268 306 68 15 chr2 193322753 193322889 -59933694 + MIR SINE MIR 3 154 -62 21 0 0 0 chr2 193323425 193323446 -59933137 + AT_rich Low_complexity Low_complexity 1 21 0 402 325 46 26 chr2 193323952 193324146 -59932437 + LTR16C LTR ERVL 3 200 -291 2231 99 0 35 chr2 193324174 193324487 -59932096 - AluSx SINE Alu -10 302 1 2901 220 182 19 chr2 193324657 193325939 -59930644 - L1MCa LINE L1 -3866 2698 1208 382 240 91 16 chr2 193326064 193326185 -59930398 - L1MCa LINE L1 -5541 1023 894 1175 293 24 68 chr2 193326333 193326967 -59929616 - L1MCa LINE L1 -5439 606 1 252 242 86 102 chr2 193326984 193327112 -59929471 + LTR16C LTR ERVL 354 479 -12 25 31 0 0 chr2 193327330 193327362 -59929221 + AT_rich Low_complexity Low_complexity 1 32 0 2640 241 74 12 chr2 193328453 193329174 -59927409 - MER21B LTR ERV1 -71 860 1 383 387 76 20 chr2 193329382 193329693 -59926890 - L2 LINE L2 -276 3037 2714 385 377 56 30 chr2 193329776 193330081 -59926502 - LTR16C LTR ERVL -23 468 156 412 182 23 0 chr2 193330197 193330285 -59926298 + L1MA3 LINE L1 4864 4953 -1193 * 5148 158 32 6 chr2 193330275 193331197 -59925386 + L1MA3 LINE L1 5329 6268 -37 23 0 0 0 chr2 193331197 193331220 -59925363 + AT_rich Low_complexity Low_complexity 1 23 0 208 154 0 26 chr2 193331437 193331476 -59925107 + CT-rich Low_complexity Low_complexity 3 40 0 22 0 0 0 chr2 193331633 193331655 -59924928 + AT_rich Low_complexity Low_complexity 1 22 0 5562 155 17 12 chr2 193331914 193332972 -59923611 - L1MA8 LINE L1 -1 7250 6185 591 198 85 19 chr2 193332972 193333082 -59923501 - MER44D DNA MER2_type -1882 605 504 360 43 0 0 chr2 193333082 193333128 -59923455 + (TC)n Simple_repeat Simple_repeat 1 46 0 591 198 85 19 chr2 193333128 193333227 -59923356 - MER44D DNA MER2_type -1983 504 1 1763 212 14 30 chr2 193333229 193333668 -59922915 - L1MA8 LINE L1 -923 6183 5752 3830 169 49 45 chr2 193333769 193334619 -59921964 - L1MA8 LINE L1 -1849 5257 4404 8059 170 30 13 chr2 193334620 193336056 -59920527 + Tigger4(Zombi) DNA MER2_type 1 1460 -1271 246 174 0 0 chr2 193336078 193336124 -59920459 + (CA)n Simple_repeat Simple_repeat 2 47 0 6800 173 18 13 chr2 193336124 193337396 -59919187 + Tigger4(Zombi) DNA MER2_type 1452 2729 -2 228 121 0 0 chr2 193337400 193337433 -59919150 - L1MA8 LINE L1 -2704 4402 4370 4685 247 91 43 chr2 193337434 193338708 -59917875 - L1MA8 LINE L1 -2970 4136 2925 2169 121 0 0 chr2 193338708 193339006 -59917577 + AluSx SINE Alu 1 298 -14 4685 247 91 43 chr2 193339006 193341949 -59914634 - L1MA8 LINE L1 -4181 2925 5 385 297 10 10 chr2 193342017 193342118 -59914465 - L2 LINE L2 -18 3295 3195 633 239 55 103 chr2 193343172 193343666 -59912917 + L1MC5 LINE L1 7442 7911 -50 409 309 166 0 chr2 193343681 193343862 -59912721 + MIR SINE MIR 31 241 -21 2497 166 14 9 chr2 193344524 193344951 -59911632 - MSTB1 LTR MaLR 0 432 4 2158 122 3 0 chr2 193345363 193345667 -59910916 - AluSx SINE Alu -7 305 1 644 158 16 24 chr2 193345878 193346005 -59910578 - MSTB1 LTR MaLR -118 314 189 23 0 0 0 chr2 193347165 193347188 -59909395 + AT_rich Low_complexity Low_complexity 1 23 0 36 94 0 0 chr2 193347316 193347422 -59909161 + AT_rich Low_complexity Low_complexity 1 106 0 1247 158 17 42 chr2 193349445 193349685 -59906898 + MER46A DNA MER2_type 1 234 -2 249 340 72 0 chr2 193350540 193350637 -59905946 + L2 LINE L2 3169 3272 0 183 42 0 0 chr2 193351902 193351926 -59904657 + (A)n Simple_repeat Simple_repeat 1 24 0 323 269 105 47 chr2 193353155 193353412 -59903171 + L1M4 LINE L1 4550 4821 -1325 434 358 42 40 chr2 193353459 193353706 -59902877 + L1M4 LINE L1 4873 5118 -1028 1606 185 0 0 chr2 193353706 193353971 -59902612 + AluJb SINE Alu 15 279 -33 189 0 0 0 chr2 193353971 193353992 -59902591 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 434 358 42 40 chr2 193353992 193354268 -59902315 + L1M4 LINE L1 5117 5398 -748 2297 179 24 0 chr2 193355702 193356120 -59900463 + MSTB1 LTR MaLR 4 431 -1 21 0 0 0 chr2 193356250 193356271 -59900312 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 193357544 193357566 -59899017 + AT_rich Low_complexity Low_complexity 1 22 0 243 316 226 0 chr2 193358101 193358234 -59898349 - MER5B DNA MER1_type -9 169 7 954 203 88 35 chr2 193361108 193361413 -59895170 - MSTD LTR MaLR -2 394 43 13209 217 24 34 chr2 193361425 193365147 -59891436 + L1PA15 LINE L1 1867 5550 -1299 5063 146 16 12 chr2 193365152 193366048 -59890535 + L1PA15 LINE L1 5665 6557 -311 2321 125 8 3 chr2 193366048 193366401 -59890182 - THE1A LTR MaLR 0 355 1 10859 113 7 1 chr2 193366401 193367971 -59888612 - THE1A-int LTR MaLR 0 1580 1 2609 102 3 0 chr2 193367971 193368325 -59888258 - THE1A LTR MaLR 0 355 1 5063 146 16 12 chr2 193368325 193368616 -59887967 + L1PA15 LINE L1 6556 6855 -13 24 53 0 0 chr2 193369895 193369933 -59886650 + AT_rich Low_complexity Low_complexity 1 38 0 322 61 0 41 chr2 193369987 193370036 -59886547 + L1PA7 LINE L1 6100 6146 -8 26 50 0 0 chr2 193371262 193371302 -59885281 + AT_rich Low_complexity Low_complexity 1 40 0 214 155 78 29 chr2 193371317 193371420 -59885163 + (TA)n Simple_repeat Simple_repeat 1 108 0 21 0 0 0 chr2 193372324 193372345 -59884238 + AT_rich Low_complexity Low_complexity 1 21 0 2055 113 17 0 chr2 193372965 193373267 -59883316 - AluSx SINE Alu -5 307 1 23 92 0 0 chr2 193373576 193373641 -59882942 + AT_rich Low_complexity Low_complexity 1 65 0 22 35 0 0 chr2 193374907 193374936 -59881647 + AT_rich Low_complexity Low_complexity 1 29 0 25 51 0 0 chr2 193375079 193375118 -59881465 + AT_rich Low_complexity Low_complexity 1 39 0 1730 91 8 30 chr2 193375171 193375436 -59881147 - AluY SINE Alu -11 300 42 222 116 0 0 chr2 193375680 193375723 -59880860 + (TG)n Simple_repeat Simple_repeat 1 43 0 508 317 128 14 chr2 193377120 193377543 -59879040 - L1M4 LINE L1 -1908 4238 3768 1839 237 79 57 chr2 193377594 193378507 -59878076 - L1MC3 LINE L1 -356 7639 6653 260 154 0 0 chr2 193378508 193378560 -59878023 - L1MC3 LINE L1 -2479 5306 5255 24 0 0 0 chr2 193380196 193380220 -59876363 + AT_rich Low_complexity Low_complexity 1 24 0 23 54 0 0 chr2 193380400 193380437 -59876146 + AT_rich Low_complexity Low_complexity 1 37 0 23 54 0 0 chr2 193380509 193380546 -59876037 + AT_rich Low_complexity Low_complexity 1 37 0 393 252 29 92 chr2 193381067 193381273 -59875310 - LTR16B LTR ERVL 0 464 272 691 327 129 21 chr2 193381696 193382084 -59874499 - LTR16B LTR ERVL -32 432 3 22 35 0 0 chr2 193382303 193382332 -59874251 + AT_rich Low_complexity Low_complexity 1 29 0 1969 146 61 3 chr2 193383746 193384075 -59872508 + MER7A DNA MER2_type 1 346 0 199 296 19 0 chr2 193384091 193384145 -59872438 - L2 LINE L2 -16 3256 3202 673 204 49 12 chr2 193384183 193384345 -59872238 - L1MA10 LINE L1 -1 6333 6166 1217 217 33 12 chr2 193384385 193384717 -59871866 + L1 LINE L1 4170 4508 -1638 31 26 0 0 chr2 193384746 193384784 -59871799 + AT_rich Low_complexity Low_complexity 1 38 0 201 39 0 0 chr2 193385573 193385599 -59870984 + (TG)n Simple_repeat Simple_repeat 2 27 0 265 255 170 11 chr2 193385893 193386081 -59870502 - HAL1 LINE L1 -844 1663 1446 1644 196 0 6 chr2 193386772 193387083 -59869500 - AluJb SINE Alu -1 311 3 1870 237 62 49 chr2 193387120 193387736 -59868847 + MLT1E3 LTR MaLR 1 624 0 1697 197 65 78 chr2 193388534 193389046 -59867537 - MLT1D LTR MaLR 0 505 1 21 0 0 0 chr2 193389782 193389803 -59866780 + AT_rich Low_complexity Low_complexity 1 21 0 5176 191 26 6 chr2 193390473 193392276 -59864307 - L1PA16 LINE L1 -1 6165 4326 186 167 0 0 chr2 193392317 193392353 -59864230 + CT-rich Low_complexity Low_complexity 1 36 0 2232 211 72 12 chr2 193392489 193393628 -59862955 - L1MB5 LINE L1 -9 6663 5437 1070 218 40 18 chr2 193393776 193394051 -59862532 - L1MB5 LINE L1 -4513 2133 1853 378 292 68 35 chr2 193394056 193394269 -59862314 - L1MB5 LINE L1 -6078 497 11 230 179 0 0 chr2 193394272 193394311 -59862272 + L1ME LINE L1 5364 5402 -2406 23 54 0 0 chr2 193395528 193395565 -59861018 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr2 193395899 193395921 -59860662 + AT_rich Low_complexity Low_complexity 1 22 0 194 300 246 0 chr2 193396876 193396986 -59859597 - MIR3 SINE MIR 0 208 72 2115 117 0 3 chr2 193397053 193397383 -59859200 + AluSc SINE Alu 1 309 0 1176 133 11 0 chr2 193397465 193397645 -59858938 - MLT2D LTR ERVL -232 182 1 1513 174 37 22 chr2 193397645 193397967 -59858616 - ERVL-D LTR ERVL -7 5757 5431 1466 143 59 35 chr2 193397979 193398266 -59858317 + MER44D DNA MER2_type 35 598 -11 285 29 0 0 chr2 193398275 193398309 -59858274 + (CA)n Simple_repeat Simple_repeat 1 34 0 4132 175 22 25 chr2 193398310 193399083 -59857500 - ERVL-D LTR ERVL -345 5419 4649 423 298 26 40 chr2 193399098 193399326 -59857257 + L1ME LINE L1 5568 5792 -329 5020 193 52 13 chr2 193399442 193400319 -59856264 - ERVL-D LTR ERVL -1101 4663 3743 1947 159 3 0 chr2 193400319 193400627 -59855956 + AluSx SINE Alu 1 309 -3 5020 193 52 13 chr2 193400627 193400723 -59855860 - ERVL-D LTR ERVL -2021 3743 3652 266 297 40 20 chr2 193400870 193400971 -59855612 + L2 LINE L2 2947 3049 -264 1080 261 144 47 chr2 193400971 193401494 -59855089 + MLT1E LTR MaLR 1 624 0 345 135 0 0 chr2 193401517 193401569 -59855014 - AluSq/x SINE Alu -167 135 84 294 274 0 0 chr2 193401568 193401630 -59854953 - MER7A DNA MER2_type -285 63 2 * 18930 192 30 23 chr2 193401976 193404495 -59852088 - L1MA3 LINE L1 0 7724 5223 240 35 0 0 chr2 193404495 193404524 -59852059 + (TG)n Simple_repeat Simple_repeat 2 30 0 18930 192 30 23 chr2 193404524 193409611 -59846972 - L1MA3 LINE L1 -2501 5223 17 186 103 0 0 chr2 193409974 193410003 -59846580 + (TG)n Simple_repeat Simple_repeat 2 30 0 22 35 0 0 chr2 193410550 193410579 -59846004 + AT_rich Low_complexity Low_complexity 1 29 0 186 241 86 17 chr2 193410579 193410637 -59845946 + L2 LINE L2 3248 3309 -4 1791 108 16 0 chr2 193411351 193411600 -59844983 - THE1B LTR MaLR -1 363 111 6713 128 42 44 chr2 193411601 193412753 -59843830 - THE1B-int LTR MaLR -431 1149 1 2551 116 0 0 chr2 193412760 193413113 -59843470 - THE1B LTR MaLR -11 353 1 414 62 62 0 chr2 193413553 193413617 -59842966 + MER41B LTR ERV1 480 547 -88 315 49 0 0 chr2 193413617 193413658 -59842925 + (CA)n Simple_repeat Simple_repeat 2 42 0 527 194 5 151 chr2 193414771 193414871 -59841712 - L1MEc LINE L1 -6193 203 147 499 211 7 99 chr2 193414871 193415013 -59841570 - FLAM_A SINE Alu -4 129 1 527 194 5 151 chr2 193415013 193415118 -59841465 - L1MEc LINE L1 -6249 147 28 186 71 0 0 chr2 193415686 193415714 -59840869 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 7721 16 3 0 chr2 193415722 193417311 -59839272 - L1HS LINE L1 -2 6153 4561 21 36 0 0 chr2 193419060 193419088 -59837495 + AT_rich Low_complexity Low_complexity 1 28 0 231 140 0 20 chr2 193422185 193422235 -59834348 + (CAG)n Simple_repeat Simple_repeat 3 51 0 2094 105 3 0 chr2 193423692 193423978 -59832605 - AluSx SINE Alu -5 307 21 22 35 0 0 chr2 193424345 193424374 -59832209 + AT_rich Low_complexity Low_complexity 1 29 0 282 362 164 26 chr2 193425763 193426371 -59830212 + L2 LINE L2 2199 2890 -424 289 200 38 12 chr2 193426983 193427063 -59829520 + (TCTA)n Simple_repeat Simple_repeat 3 84 0 243 132 0 0 chr2 193427908 193427946 -59828637 - HY5 scRNA scRNA -46 38 1 24 0 0 0 chr2 193428020 193428044 -59828539 + AT_rich Low_complexity Low_complexity 1 24 0 1746 161 24 0 chr2 193428075 193428373 -59828210 + AluSx SINE Alu 7 311 -1 24 32 0 0 chr2 193428588 193428619 -59827964 + AT_rich Low_complexity Low_complexity 1 31 0 6816 20 0 0 chr2 193430221 193431016 -59825567 - L1P LINE L1 -1615 4531 3737 * 10572 27 0 0 chr2 193431015 193432292 -59824291 + L1P LINE L1 1932 3208 -2938 338 239 94 17 chr2 193433027 193433144 -59823439 - L2 LINE L2 -19 3294 3169 22 35 0 0 chr2 193433167 193433196 -59823387 + AT_rich Low_complexity Low_complexity 1 29 0 603 175 18 0 chr2 193433706 193433820 -59822763 + L1MD1 LINE L1 6114 6229 -13 504 351 113 22 chr2 193434688 193435149 -59821434 - L2 LINE L2 -1065 2249 1747 21 37 0 56 chr2 193435857 193435911 -59820672 + AT_rich Low_complexity Low_complexity 1 51 0 27 0 0 0 chr2 193436073 193436100 -59820483 + AT_rich Low_complexity Low_complexity 1 27 0 492 240 144 34 chr2 193436789 193436841 -59819742 + MIR SINE MIR 18 63 -199 1697 180 24 30 chr2 193436841 193437213 -59819370 + MLT1A2 LTR MaLR 5 374 0 492 240 144 34 chr2 193437213 193437368 -59819215 + MIR SINE MIR 63 248 -14 425 264 39 45 chr2 193437405 193437583 -59819000 - LTR16A1 LTR ERVL 0 457 281 662 310 35 45 chr2 193438054 193438344 -59818239 + LTR40b LTR ERVL 1 287 -175 279 219 37 12 chr2 193438613 193438695 -59817888 + LTR40b LTR ERVL 367 450 -12 24 0 0 0 chr2 193439603 193439627 -59816956 + AT_rich Low_complexity Low_complexity 1 24 0 3900 221 29 4 chr2 193439665 193440037 -59816546 + L1 LINE L1 4013 4374 -1772 363 23 0 0 chr2 193440037 193440081 -59816502 + (CA)n Simple_repeat Simple_repeat 2 45 0 3900 221 29 4 chr2 193440081 193440613 -59815970 + L1 LINE L1 4374 4939 -1207 2496 167 14 0 chr2 193440613 193441032 -59815551 + L1PA16 LINE L1 5733 6157 -9 23 54 0 0 chr2 193441034 193441071 -59815512 + AT_rich Low_complexity Low_complexity 1 37 0 37 81 0 0 chr2 193442062 193442148 -59814435 + AT_rich Low_complexity Low_complexity 1 86 0 267 286 29 0 chr2 193442149 193442219 -59814364 - MIR SINE MIR -119 143 72 2191 171 28 61 chr2 193442249 193442793 -59813790 + L1MC2 LINE L1 5774 6299 -45 1729 242 47 16 chr2 193442812 193443361 -59813222 - L1M4 LINE L1 -1199 4947 4382 442 245 26 15 chr2 193443363 193443518 -59813065 + MLT1B LTR MaLR 1 173 -216 680 213 0 15 chr2 193443521 193443657 -59812926 + AluJb SINE Alu 1 134 -178 1105 199 5 5 chr2 193443703 193443904 -59812679 + MLT1B LTR MaLR 190 390 0 1114 243 65 6 chr2 193443909 193444247 -59812336 - L1M4 LINE L1 -1767 4379 4022 2853 258 63 43 chr2 193444339 193445476 -59811107 - L1MCb LINE L1 -4851 1194 299 1668 142 62 59 chr2 193445476 193445650 -59810933 + THE1C LTR MaLR 1 173 -202 2229 125 0 0 chr2 193445650 193445953 -59810630 + AluSx SINE Alu 1 303 -9 1668 142 62 59 chr2 193445953 193446152 -59810431 + THE1C LTR MaLR 173 375 0 2853 258 63 43 chr2 193446152 193446454 -59810129 - L1MCb LINE L1 -5746 299 5 451 287 21 37 chr2 193446876 193447064 -59809519 + LTR41 LTR ERVL 3 187 -586 23 68 0 0 chr2 193447618 193447662 -59808921 + AT_rich Low_complexity Low_complexity 1 44 0 1738 191 6 0 chr2 193447662 193448008 -59808575 - L1MA6 LINE L1 -15 6285 5938 840 21 0 0 chr2 193448008 193448104 -59808479 + L1PA3 LINE L1 6056 6152 -3 3011 158 41 5 chr2 193448113 193448670 -59807913 - L1MA6 LINE L1 -351 5949 5373 505 147 0 20 chr2 193448677 193448779 -59807804 + (CATATA)n Simple_repeat Simple_repeat 3 102 0 458 193 7 73 chr2 193448792 193448942 -59807641 - L1MA6 LINE L1 -762 5384 5245 2807 153 63 5 chr2 193450861 193451433 -59805150 + MER39B LTR ERV1 1 648 -5 24 100 0 0 chr2 193451571 193451651 -59804932 + AT_rich Low_complexity Low_complexity 1 80 0 22 35 0 0 chr2 193451897 193451926 -59804657 + AT_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr2 193452142 193452177 -59804406 + AT_rich Low_complexity Low_complexity 1 35 0 180 0 0 0 chr2 193453743 193453763 -59802820 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 28 0 0 0 chr2 193453766 193453794 -59802789 + AT_rich Low_complexity Low_complexity 1 28 0 5442 63 6 149 chr2 193453969 193454933 -59801650 - LTR12 LTR ERV1 0 826 1 255 274 0 0 chr2 193455209 193455260 -59801323 + MER81 DNA DNA 20 70 -44 6426 28 0 1 chr2 193455438 193456932 -59799651 - L1PA3 LINE L1 -3 6152 4622 13253 26 2 0 chr2 193456932 193458630 -59797953 + L1P2 LINE L1 3824 5524 -631 261 322 13 46 chr2 193458748 193458900 -59797683 + LTR16A LTR ERVL 2 148 -302 389 366 78 1 chr2 193460960 193461320 -59795263 + LTR16C LTR ERVL 68 491 0 338 321 99 36 chr2 193461658 193461910 -59794673 + HERV16 LTR ERVL 393 660 -4336 290 220 0 0 chr2 193462396 193462446 -59794137 + LTR16C LTR ERVL 50 99 -392 201 229 0 0 chr2 193462485 193462520 -59794063 + (TG)n Simple_repeat Simple_repeat 2 36 0 830 223 30 95 chr2 193462533 193462869 -59793714 - MLT2C1 LTR ERVL -71 326 13 697 291 70 4 chr2 193462988 193463229 -59793354 + LTR16C LTR ERVL 235 491 0 35 0 0 0 chr2 193463281 193463316 -59793267 + AT_rich Low_complexity Low_complexity 1 35 0 388 176 10 98 chr2 193465344 193465446 -59791137 + MER34 LTR ERV1 6 107 -435 997 187 35 0 chr2 193465498 193465701 -59790882 + L1MA4 LINE L1 6082 6291 -9 413 235 52 25 chr2 193465975 193466118 -59790465 + MER34 LTR ERV1 423 538 -4 3908 169 31 28 chr2 193467360 193468185 -59788398 - L1MA6 LINE L1 -5 6295 5468 1385 204 27 12 chr2 193468195 193468523 -59788060 + L1 LINE L1 2729 3061 -3085 532 193 9 0 chr2 193468512 193468626 -59787957 + L1 LINE L1 3981 4095 -2051 * 2160 173 58 0 chr2 193468627 193469020 -59787563 + MSTC LTR MaLR 1 416 -12 1690 223 112 41 chr2 193469067 193469551 -59787032 + MER101B LTR ERV1 1 518 -52 520 180 221 0 chr2 193469592 193469714 -59786869 + MSTC-int LTR MaLR 32 180 -1555 1369 161 55 18 chr2 193469718 193469991 -59786592 + MER49 LTR ERV1 1 283 -640 355 184 17 35 chr2 193469985 193470103 -59786480 + MER4D LTR ERV1 62 284 -588 * 1625 209 20 11 chr2 193470100 193470454 -59786129 + MER4D LTR ERV1 547 903 0 3806 259 118 14 chr2 193470466 193471786 -59784797 + MSTC-int LTR MaLR 187 1644 -7 2564 144 24 19 chr2 193471793 193472215 -59784368 + MSTC LTR MaLR 1 424 -4 1039 160 6 0 chr2 193472218 193472393 -59784190 + L1 LINE L1 4095 4270 -1876 * 4188 190 14 11 chr2 193472378 193473256 -59783327 + L1 LINE L1 4539 5419 -743 21 36 0 0 chr2 193473582 193473610 -59782973 + AT_rich Low_complexity Low_complexity 1 28 0 623 299 5 0 chr2 193473745 193473929 -59782654 - MER5A DNA MER1_type -4 185 1 180 111 0 0 chr2 193474032 193474059 -59782524 + (TCTA)n Simple_repeat Simple_repeat 4 30 0 24 32 0 0 chr2 193475624 193475655 -59780928 + AT_rich Low_complexity Low_complexity 1 31 0 474 322 26 31 chr2 193476181 193476442 -59780141 + MIR SINE MIR 3 262 0 282 336 22 52 chr2 193476471 193476605 -59779978 - MIR SINE MIR -112 150 21 25 90 0 0 chr2 193476989 193477056 -59779527 + AT_rich Low_complexity Low_complexity 1 67 0 25 31 0 0 chr2 193477368 193477400 -59779183 + AT_rich Low_complexity Low_complexity 1 32 0 402 320 41 17 chr2 193478138 193478310 -59778273 + L3 LINE CR1 1272 1447 -130 193 280 107 13 chr2 193478382 193478457 -59778126 + L3 LINE CR1 1473 1554 -23 3415 185 36 12 chr2 193478688 193479358 -59777225 - Tigger1 DNA MER2_type 0 2418 1733 8049 146 12 11 chr2 193479358 193480250 -59776333 - Tigger1 DNA MER2_type -1098 1320 425 1830 175 7 0 chr2 193480250 193480559 -59776024 + AluJo SINE Alu 1 311 -1 8049 146 12 11 chr2 193480559 193480985 -59775598 - Tigger1 DNA MER2_type -1993 425 1 354 316 41 23 chr2 193481242 193481278 -59775305 + MIR SINE MIR 38 72 -190 3352 153 34 14 chr2 193481278 193481868 -59774715 - LTR43 LTR ERV1 0 602 1 354 316 41 23 chr2 193481868 193481996 -59774587 + MIR SINE MIR 72 202 -60 22 56 0 0 chr2 193484414 193484450 -59772133 + AT_rich Low_complexity Low_complexity 1 36 0 756 250 42 0 chr2 193484506 193484674 -59771909 + FAM SINE Alu 1 175 0 1511 224 3 3 chr2 193484677 193484989 -59771594 + AluJo SINE Alu 1 312 0 894 169 12 12 chr2 193485348 193485514 -59771069 + L1PB4 LINE L1 5626 5791 -365 244 192 50 0 chr2 193485537 193485636 -59770947 + (TA)n Simple_repeat Simple_repeat 1 104 0 252 214 0 0 chr2 193485684 193485740 -59770843 + (TATATG)n Simple_repeat Simple_repeat 2 57 0 2123 111 38 24 chr2 193485743 193486114 -59770469 + L1PB4 LINE L1 5781 6156 0 275 229 8 85 chr2 193486325 193486443 -59770140 - L1ME LINE L1 -396 5725 5617 2613 267 55 38 chr2 193486478 193487768 -59768815 + L1MCb LINE L1 8 1347 -5168 5063 165 27 32 chr2 193487768 193488842 -59767741 - MER11C LTR ERVK 0 1071 3 2613 267 55 38 chr2 193488842 193489166 -59767417 + L1MCb LINE L1 1347 1664 -4851 498 304 6 28 chr2 193489315 193489496 -59767087 + L2 LINE L2 2440 2616 -698 222 37 0 0 chr2 193489679 193489706 -59766877 + (CA)n Simple_repeat Simple_repeat 2 28 0 2205 116 0 3 chr2 193490689 193490990 -59765593 + AluSq SINE Alu 1 300 -13 392 382 21 11 chr2 193491053 193491239 -59765344 - L3 LINE CR1 -30 1547 1360 441 216 27 7 chr2 193491323 193491471 -59765112 + CT-rich Low_complexity Low_complexity 2 152 0 219 360 88 9 chr2 193491509 193491623 -59764960 - L2 LINE L2 -14 3258 3136 2028 338 85 30 chr2 193492032 193493169 -59763414 + L2 LINE L2 918 2117 -1197 325 217 23 47 chr2 193493302 193493431 -59763152 + L1MC5 LINE L1 7452 7577 -384 1950 146 3 19 chr2 193493491 193493806 -59762777 + AluSg SINE Alu 1 310 0 534 252 0 14 chr2 193493821 193493968 -59762615 + L1MC5 LINE L1 7715 7859 -102 1569 173 64 24 chr2 193493983 193494313 -59762270 + MER61A LTR ERV1 1 343 0 2907 196 70 18 chr2 193494313 193494985 -59761598 + MER61A-int LTR ERV1 1 707 -4510 326 47 0 0 chr2 193495017 193495060 -59761523 + MER61A-int LTR ERV1 1320 1362 -3855 6045 145 30 19 chr2 193495062 193496619 -59759964 + MER61-int LTR ERV1 1655 3992 -1023 1960 157 0 0 chr2 193497613 193497906 -59758677 + AluSx SINE Alu 1 293 -19 615 244 105 34 chr2 193498398 193498607 -59757976 + MER58A DNA MER1_type 1 224 0 39 84 0 0 chr2 193498966 193499061 -59757522 + AT_rich Low_complexity Low_complexity 1 95 0 25 0 0 0 chr2 193500116 193500141 -59756442 + AT_rich Low_complexity Low_complexity 1 25 0 24 32 0 0 chr2 193501024 193501055 -59755528 + AT_rich Low_complexity Low_complexity 1 31 0 36 23 0 0 chr2 193501579 193501622 -59754961 + AT_rich Low_complexity Low_complexity 1 43 0 301 282 128 17 chr2 193503546 193503663 -59752920 - L1MC/D LINE L1 -2189 5619 5490 1890 153 0 28 chr2 193503691 193504011 -59752572 - AluSx SINE Alu -1 311 1 415 278 30 47 chr2 193504025 193504194 -59752389 - HAL1b LINE L1 -809 539 374 361 292 56 0 chr2 193504318 193504479 -59752104 + L1M4 LINE L1 4235 4404 -1742 21 57 0 0 chr2 193504673 193504708 -59751875 + AT_rich Low_complexity Low_complexity 1 35 0 341 184 103 23 chr2 193505803 193505890 -59750693 + LOR1a LTR ERV1 1 94 -403 2234 113 29 22 chr2 193505890 193506159 -59750424 + L1PB1 LINE L1 5324 5590 -561 489 34 0 0 chr2 193506159 193506218 -59750365 + (TA)n Simple_repeat Simple_repeat 1 59 0 315 0 0 0 chr2 193506217 193506252 -59750331 + (CA)n Simple_repeat Simple_repeat 2 36 0 * 2234 113 29 22 chr2 193506218 193506605 -59749978 + L1PB1 LINE L1 5590 6145 -6 1870 199 36 0 chr2 193506614 193506975 -59749608 + LOR1b LTR ERV1 88 461 0 2057 116 7 0 chr2 193507548 193507878 -59748705 - AluSx SINE Alu 0 332 1 28 29 0 0 chr2 193507878 193507913 -59748670 + AT_rich Low_complexity Low_complexity 1 35 0 2423 186 118 2 chr2 193507922 193508438 -59748145 - L1MA6 LINE L1 -22 6278 5703 2209 186 50 0 chr2 193508439 193509193 -59747390 + L1MA6 LINE L1 4896 5686 -614 1967 161 33 25 chr2 193509214 193509575 -59747008 - THE1B LTR MaLR 0 364 1 2366 47 4 0 chr2 193510271 193510549 -59746034 - AluY SINE Alu -5 306 28 1086 240 43 24 chr2 193510655 193510984 -59745599 - L1MA7 LINE L1 -11 6280 5946 1439 162 36 0 chr2 193510985 193511238 -59745345 - L1MA6 LINE L1 -655 5636 5375 7287 37 12 2 chr2 193511253 193512597 -59743986 - L1PA4 LINE L1 -1 6154 4804 3026 32 0 11 chr2 193512597 193512973 -59743610 + L1PA4 LINE L1 4432 4803 -1343 8861 182 16 65 chr2 193512990 193515220 -59741363 - L1MA6 LINE L1 -789 5357 3239 22 56 0 0 chr2 193516563 193516599 -59739984 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr2 193516881 193516910 -59739673 + AT_rich Low_complexity Low_complexity 1 29 0 2634 47 0 6 chr2 193518030 193518349 -59738234 + AluYb8 SINE Alu 1 317 -1 225 0 0 0 chr2 193518349 193518374 -59738209 + (TA)n Simple_repeat Simple_repeat 2 26 0 1188 120 0 0 chr2 193518374 193518561 -59738022 + AluSg/x SINE Alu 130 316 0 288 0 0 0 chr2 193518591 193518623 -59737960 + (TG)n Simple_repeat Simple_repeat 1 32 0 25 75 0 0 chr2 193518705 193518758 -59737825 + AT_rich Low_complexity Low_complexity 1 53 0 25 0 0 0 chr2 193519524 193519549 -59737034 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr2 193519608 193519632 -59736951 + AT_rich Low_complexity Low_complexity 1 24 0 1243 284 58 44 chr2 193520035 193520804 -59735779 + L1MCc LINE L1 866 1623 -5319 1855 136 31 50 chr2 193520804 193521186 -59735397 + THE1C LTR MaLR 1 375 0 1243 284 58 44 chr2 193521186 193521470 -59735113 + L1MCc LINE L1 1623 1901 -5041 230 0 33 0 chr2 193521470 193521500 -59735083 + (CA)n Simple_repeat Simple_repeat 1 31 0 1243 284 58 44 chr2 193521500 193521783 -59734800 + L1MCc LINE L1 1901 2689 -4253 6323 206 32 4 chr2 193522406 193524658 -59731925 + L1 LINE L1 1560 3876 -2972 1588 242 22 5 chr2 193524633 193525050 -59731533 + L1 LINE L1 5509 5932 -916 * 2024 145 0 0 chr2 193525323 193525627 -59730956 - AluSx SINE Alu -8 304 1 868 125 0 8 chr2 193525732 193525860 -59730723 - L1PA8A LINE L1 -12 6119 5993 3609 133 37 9 chr2 193525866 193526439 -59730144 - L1P3 LINE L1 -5264 611 23 912 244 102 38 chr2 193526508 193526674 -59729909 - MLT1B LTR MaLR -8 459 305 2056 112 11 0 chr2 193526674 193526959 -59729624 + AluSc SINE Alu 1 288 -21 912 244 102 38 chr2 193526959 193527209 -59729374 - MLT1B LTR MaLR -162 305 1 2442 289 52 52 chr2 193527210 193528019 -59728564 - L1M4c LINE L1 -4610 2528 1721 1409 234 3 6 chr2 193528019 193528331 -59728252 - AluJb SINE Alu -1 311 1 2442 289 52 52 chr2 193528331 193529782 -59726801 - L1M4c LINE L1 -5417 1721 12 1076 222 87 58 chr2 193532336 193532715 -59723868 - MLT1B LTR MaLR 0 390 1 423 167 25 8 chr2 193532731 193532815 -59723768 - L1M2 LINE L1 -754 5546 5468 31 48 0 16 chr2 193532834 193532870 -59723713 + AT_rich Low_complexity Low_complexity 1 37 -25 3262 187 34 30 chr2 193532870 193533615 -59722968 - L1MA6 LINE L1 0 6300 5553 31 48 0 16 chr2 193533615 193533641 -59722942 + AT_rich Low_complexity Low_complexity 37 62 0 1037 196 7 0 chr2 193533646 193533872 -59722711 - L1ME LINE L1 -581 5589 5360 * 2707 221 122 24 chr2 193533861 193534700 -59721883 + L1ME LINE L1 4442 5362 -784 830 207 63 22 chr2 193534754 193534929 -59721654 - L1MC/D LINE L1 -743 5403 5256 2817 3 0 0 chr2 193534929 193535237 -59721346 - AluYa5 SINE Alu -3 308 1 830 207 63 22 chr2 193535237 193535402 -59721181 - L1MC/D LINE L1 -890 5256 5099 527 219 24 0 chr2 193535472 193535595 -59720988 + L1MC/D LINE L1 5558 5683 -676 22 0 0 0 chr2 193535953 193535975 -59720608 + AT_rich Low_complexity Low_complexity 1 22 0 3496 162 60 7 chr2 193536201 193537045 -59719538 + Tigger3b DNA MER2_type 26 957 -274 571 342 75 14 chr2 193537067 193537209 -59719374 - L2 LINE L2 -936 2378 2246 920 239 109 43 chr2 193537209 193537531 -59719052 - MER2 DNA MER2_type -1 343 1 571 342 75 14 chr2 193537531 193537733 -59718850 - L2 LINE L2 -1068 2246 2013 3047 167 27 34 chr2 193538001 193538293 -59718290 - LTR24C LTR ERV1 0 635 342 1139 138 30 5 chr2 193538293 193538496 -59718087 + L1PA16 LINE L1 5950 6157 -9 3047 167 27 34 chr2 193538496 193538843 -59717740 - LTR24C LTR ERV1 -293 342 1 43 0 0 0 chr2 193539125 193539168 -59717415 + AT_rich Low_complexity Low_complexity 1 43 0 7149 52 0 0 chr2 193539168 193540500 -59716083 - L1PA5 LINE L1 0 6154 4822 8859 50 3 0 chr2 193540500 193541604 -59714979 + L1P LINE L1 3755 4861 -1285 216 97 0 0 chr2 193542718 193542749 -59713834 + (CTA)n Simple_repeat Simple_repeat 2 32 0 299 282 29 29 chr2 193543300 193543403 -59713180 + MIR SINE MIR 49 151 -111 198 226 0 48 chr2 193543656 193543718 -59712865 + MIR SINE MIR 164 222 -40 3196 32 0 0 chr2 193544382 193544762 -59711821 - L1PA4 LINE L1 -3 6152 5773 2335 185 48 2 chr2 193546599 193547059 -59709524 - MER31A LTR ERV1 -4 481 1 532 269 43 16 chr2 193547519 193547705 -59708878 + L2 LINE L2 2570 2760 -554 804 300 152 43 chr2 193547927 193548387 -59708196 + L2 LINE L2 2804 3313 0 316 272 144 11 chr2 193548514 193548694 -59707889 - L1ME LINE L1 -373 5748 5545 237 180 120 70 chr2 193548817 193548917 -59707666 - L1ME LINE L1 -2395 5413 5309 387 376 72 17 chr2 193548917 193549098 -59707485 - MER91A DNA MER1_type -4 192 2 23 0 0 0 chr2 193549121 193549144 -59707439 + AT_rich Low_complexity Low_complexity 1 23 0 198 0 0 0 chr2 193549421 193549443 -59707140 + (TA)n Simple_repeat Simple_repeat 1 22 0 308 288 40 28 chr2 193549514 193549691 -59706892 - L1M4 LINE L1 -1572 4574 4396 25 0 0 0 chr2 193551266 193551291 -59705292 + AT_rich Low_complexity Low_complexity 1 25 0 1545 167 8 0 chr2 193552196 193552447 -59704136 - AluJo SINE Alu -11 301 49 216 0 0 0 chr2 193552482 193552506 -59704077 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 230 108 24 84 chr2 193552684 193552767 -59703816 + (TTATA)n Simple_repeat Simple_repeat 5 82 0 263 230 11 0 chr2 193553741 193553828 -59702755 + CT-rich Low_complexity Low_complexity 3 90 0 348 288 51 12 chr2 193553975 193554169 -59702414 + L1ME LINE L1 5288 5491 -679 1492 167 72 4 chr2 193554874 193555169 -59701414 + AluJo SINE Alu 1 313 0 29 0 0 0 chr2 193555179 193555208 -59701375 + AT_rich Low_complexity Low_complexity 1 29 0 608 182 0 0 chr2 193555829 193555939 -59700644 + FRAM SINE Alu 52 161 -15 29 0 0 0 chr2 193555953 193555982 -59700601 + AT_rich Low_complexity Low_complexity 1 29 0 268 301 232 32 chr2 193557274 193557520 -59699063 + L1M4b LINE L1 12 306 -6553 308 177 44 172 chr2 193557672 193557875 -59698708 + L1M4b LINE L1 984 1160 -5699 487 125 11 23 chr2 193558066 193558154 -59698429 + MER67D LTR ERV1 1 87 -427 266 309 29 29 chr2 193558280 193558416 -59698167 + LTR33 LTR ERVL 81 216 -305 290 263 0 32 chr2 193558540 193558635 -59697948 + LTR33 LTR ERVL 428 519 -2 21 0 0 0 chr2 193558731 193558752 -59697831 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr2 193558919 193558956 -59697627 + AT_rich Low_complexity Low_complexity 1 37 0 57 28 0 0 chr2 193559072 193559143 -59697440 + AT_rich Low_complexity Low_complexity 1 71 0 27 0 0 0 chr2 193559537 193559564 -59697019 + AT_rich Low_complexity Low_complexity 1 27 0 4021 186 55 19 chr2 193559806 193561178 -59695405 + L1MA9 LINE L1 4371 5789 -523 237 213 0 0 chr2 193561180 193561288 -59695295 + (TA)n Simple_repeat Simple_repeat 1 108 0 1087 254 13 0 chr2 193561300 193561532 -59695051 + MER8 DNA MER2_type 2 236 -3 225 65 0 0 chr2 193561533 193561564 -59695019 + (TG)n Simple_repeat Simple_repeat 2 32 0 1782 200 40 42 chr2 193561590 193562089 -59694494 + L1MA9 LINE L1 5777 6274 -38 1791 147 174 11 chr2 193563853 193564221 -59692362 + MSTA LTR MaLR 1 428 0 1165 294 60 54 chr2 193564231 193564813 -59691770 + MLT1E LTR MaLR 10 549 0 339 317 41 50 chr2 193565642 193565863 -59690720 + HERVL LTR ERVL 4360 4578 -1076 2133 110 3 0 chr2 193566669 193566968 -59689615 - AluSc SINE Alu -9 300 1 625 280 39 0 chr2 193567220 193567402 -59689181 + MER5A DNA MER1_type 1 189 0 191 312 54 32 chr2 193567491 193567584 -59688999 - L2 LINE L2 -429 2885 2791 1610 200 48 0 chr2 193568502 193568832 -59687751 + MLT2C1 LTR ERVL 3 348 -49 263 103 22 51 chr2 193568899 193568961 -59687622 + MLT2B3 LTR ERVL 458 554 0 342 310 21 16 chr2 193569275 193569450 -59687133 - MLT1H LTR MaLR -352 197 29 865 112 16 144 chr2 193570355 193570543 -59686040 + THE1B LTR MaLR 1 164 -200 207 0 0 0 chr2 193570543 193570566 -59686017 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 581 74 37 0 chr2 193570575 193570656 -59685927 - AluY SINE Alu -20 291 208 1156 153 19 37 chr2 193570657 193570873 -59685710 + THE1B LTR MaLR 153 364 0 10859 106 12 11 chr2 193570873 193571299 -59685284 + THE1B-int LTR MaLR 1 425 -1155 1981 127 3 0 chr2 193571299 193571620 -59684963 - AluSx SINE Alu 0 322 1 10859 106 12 11 chr2 193571620 193572771 -59683812 + THE1B-int LTR MaLR 425 1580 0 2174 135 16 32 chr2 193572771 193573141 -59683442 + THE1B LTR MaLR 1 364 0 4612 139 45 37 chr2 193573143 193574114 -59682469 + L1PA16 LINE L1 5193 6166 0 5267 170 6 26 chr2 193574117 193574517 -59682066 + L1M2 LINE L1 4318 4724 -1475 2208 116 3 0 chr2 193574517 193574819 -59681764 + AluSc SINE Alu 1 303 -6 5267 170 6 26 chr2 193574819 193575580 -59681003 + L1M2 LINE L1 4724 5456 -743 2108 115 9 16 chr2 193575575 193576002 -59680581 + L1P4 LINE L1 5017 5441 -722 * 2509 113 3 18 chr2 193576002 193576383 -59680200 + THE1C LTR MaLR 1 375 0 2108 115 9 16 chr2 193576383 193576471 -59680112 + L1P4 LINE L1 5441 5528 -635 1926 293 37 38 chr2 193576498 193577233 -59679350 - L1M2a LINE L1 -6430 738 5 524 285 76 40 chr2 193577641 193578037 -59678546 + L1MB7 LINE L1 2651 3060 -3086 524 29 14 0 chr2 193578119 193578189 -59678394 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 1995 91 4 4 chr2 193578189 193578452 -59678131 - AluSg SINE Alu -27 283 21 2156 117 0 7 chr2 193578690 193578989 -59677594 - AluSq SINE Alu -16 297 1 437 271 78 10 chr2 193579469 193579661 -59676922 + L1ME LINE L1 5616 5820 -301 1841 243 105 15 chr2 193581156 193581766 -59674817 + L1MB7 LINE L1 3346 4010 -2136 1549 206 21 27 chr2 193581770 193582144 -59674439 + L1MB7 LINE L1 5755 6126 -58 529 277 11 69 chr2 193582746 193582934 -59673649 + MIR3 SINE MIR 16 192 -16 21 57 0 0 chr2 193583099 193583134 -59673449 + AT_rich Low_complexity Low_complexity 1 35 0 2014 122 3 7 chr2 193584003 193584317 -59672266 + AluSq SINE Alu 1 313 0 297 99 74 0 chr2 193584940 193585021 -59671562 + (TA)n Simple_repeat Simple_repeat 1 87 0 21 0 0 0 chr2 193585032 193585053 -59671530 + AT_rich Low_complexity Low_complexity 1 21 0 520 295 119 4 chr2 193585692 193585936 -59670647 - LTR33 LTR ERVL -243 278 7 506 380 49 30 chr2 193586313 193586679 -59669904 + L1PA16 LINE L1 788 1160 -6414 12994 228 26 23 chr2 193586949 193592008 -59664575 + L1PA16 LINE L1 2183 7287 -317 22 35 0 0 chr2 193592236 193592265 -59664318 + AT_rich Low_complexity Low_complexity 1 29 0 474 165 0 25 chr2 193592296 193592412 -59664171 + L1MC3 LINE L1 5830 5939 -230 269 221 0 30 chr2 193592412 193592512 -59664071 + AluJ/monomer SINE Alu 241 302 0 2336 176 139 112 chr2 193592533 193592774 -59663809 + L1MC3 LINE L1 6836 7069 -716 252 351 0 0 chr2 193592774 193592868 -59663715 + MLT1F1 LTR MaLR 32 125 -442 2336 176 139 112 chr2 193592868 193593456 -59663127 + L1MC3 LINE L1 7069 7783 -2 828 40 0 0 chr2 193593888 193593988 -59662595 - L1PA5 LINE L1 -6 6148 6049 320 93 0 0 chr2 193593988 193594031 -59662552 + L1P LINE L1 1155 1197 -4949 504 163 3 11 chr2 193594138 193594247 -59662336 - L1MC3 LINE L1 -201 5967 5862 26 30 0 0 chr2 193594317 193594350 -59662233 + AT_rich Low_complexity Low_complexity 1 33 0 399 227 0 0 chr2 193595121 193595218 -59661365 + (TA)n Simple_repeat Simple_repeat 1 97 0 201 189 0 19 chr2 193595266 193595319 -59661264 + T-rich Low_complexity Low_complexity 2 53 0 664 156 39 0 chr2 193595330 193595458 -59661125 - L1MA9 LINE L1 0 6312 6180 243 323 31 21 chr2 193597496 193597592 -59658991 + L2 LINE L2 1831 1927 -1387 246 317 66 92 chr2 193598340 193598643 -59657940 - L2 LINE L2 0 3313 3019 717 319 143 42 chr2 193598771 193599549 -59657034 - L2 LINE L2 -606 2708 1853 2167 141 68 16 chr2 193599634 193600074 -59656509 + L1MA8 LINE L1 5823 6285 -6 4099 43 18 0 chr2 193600282 193600795 -59655788 - L1PA4 LINE L1 -1380 4766 4245 7111 38 12 1 chr2 193600795 193602180 -59654403 + L1PA4 LINE L1 4753 6144 -11 306 237 26 0 chr2 193602305 193602381 -59654202 + MIR SINE MIR 183 260 -2 278 231 0 15 chr2 193602384 193602449 -59654134 - L2 LINE L2 -1905 1409 1346 341 329 92 6 chr2 193603003 193603167 -59653416 + MIR SINE MIR 74 251 -11 462 305 47 45 chr2 193604155 193604512 -59652071 + MLT1I LTR MaLR 50 376 -33 1652 150 54 85 chr2 193604944 193605217 -59651366 + THE1C LTR MaLR 1 260 -115 3363 100 47 4 chr2 193605217 193605707 -59650876 - MER9 LTR ERVK 0 511 1 1652 150 54 85 chr2 193605707 193605820 -59650763 + THE1C LTR MaLR 260 375 0 253 341 0 0 chr2 193606306 193606388 -59650195 - L2 LINE L2 -1039 2275 2194 24 0 0 0 chr2 193606459 193606483 -59650100 + AT_rich Low_complexity Low_complexity 1 24 0 501 143 11 0 chr2 193606510 193606601 -59649982 - L1M2 LINE L1 -620 5671 5580 366 23 0 0 chr2 193606605 193606648 -59649935 + (TG)n Simple_repeat Simple_repeat 2 44 0 512 90 0 13 chr2 193607136 193607214 -59649369 - MADE1 DNA Mariner 0 80 4 1118 176 137 54 chr2 193608313 193608591 -59647992 - AluJo SINE Alu 0 302 2 420 130 0 0 chr2 193609390 193609459 -59647124 + (GA)n Simple_repeat Simple_repeat 2 70 0 216 0 0 0 chr2 193609667 193609691 -59646892 + (T)n Simple_repeat Simple_repeat 1 24 0 2224 183 59 9 chr2 193609811 193610253 -59646330 - MER70A LTR ERVL -4 468 5 373 217 11 33 chr2 193610987 193611171 -59645412 + (TA)n Simple_repeat Simple_repeat 1 180 0 238 203 17 119 chr2 193611197 193611315 -59645268 - L1MC4 LINE L1 -1323 6719 6614 32 26 0 0 chr2 193611361 193611400 -59645183 + AT_rich Low_complexity Low_complexity 1 39 0 241 238 75 12 chr2 193611780 193611860 -59644723 - L1M4 LINE L1 -1543 4603 4519 233 161 92 92 chr2 193611978 193612065 -59644518 - MER97c DNA MER1_type? 0 1090 1004 2097 126 0 0 chr2 193613083 193613377 -59643206 + AluSx SINE Alu 1 294 -18 4456 127 73 47 chr2 193613913 193615344 -59641239 + pTR5 LTR ERV1 761 2438 0 23 0 0 0 chr2 193616510 193616533 -59640050 + AT_rich Low_complexity Low_complexity 1 23 0 230 267 56 44 chr2 193617068 193617158 -59639425 + L2 LINE L2 3182 3272 0 2125 95 0 26 chr2 193617359 193617663 -59638920 + AluSg SINE Alu 1 296 -14 31 58 0 0 chr2 193618225 193618277 -59638306 + AT_rich Low_complexity Low_complexity 1 52 0 1789 46 0 18 chr2 193620331 193620580 -59636003 - AluY SINE Alu 0 313 69 966 138 7 0 chr2 193621018 193621170 -59635413 - THE1C LTR MaLR 0 375 223 6989 132 50 50 chr2 193621170 193622402 -59634181 - THE1C-int LTR MaLR -348 1232 1 2346 141 11 0 chr2 193622402 193622771 -59633812 - THE1C LTR MaLR 0 375 3 22 0 0 0 chr2 193623178 193623200 -59633383 + AT_rich Low_complexity Low_complexity 1 22 0 310 233 93 53 chr2 193623366 193623516 -59633067 - MER103 DNA DNA -6 160 5 22 35 0 0 chr2 193623897 193623926 -59632657 + AT_rich Low_complexity Low_complexity 1 29 0 247 177 0 51 chr2 193624741 193624820 -59631763 + (CATATA)n Simple_repeat Simple_repeat 3 77 0 1944 171 13 29 chr2 193625181 193625562 -59631021 + THE1C LTR MaLR 1 375 0 6295 209 106 35 chr2 193625789 193627355 -59629228 + MER52A LTR ERV1 8 1755 0 752 309 24 7 chr2 193628041 193628336 -59628247 - L1ME3A LINE L1 -231 5939 5640 281 298 89 6 chr2 193628357 193628525 -59628058 - L1ME3A LINE L1 -452 5669 5488 267 136 23 23 chr2 193628536 193628624 -59627959 + (TTTA)n Simple_repeat Simple_repeat 1 88 0 379 290 61 43 chr2 193628746 193628977 -59627606 - L1ME3A LINE L1 -808 5338 5104 635 228 39 6 chr2 193628993 193629167 -59627416 + L1PA16 LINE L1 5438 5618 -536 28 29 0 0 chr2 193629333 193629368 -59627215 + AT_rich Low_complexity Low_complexity 1 35 0 227 319 71 35 chr2 193629384 193629497 -59627086 - L2 LINE L2 -2 3311 3195 23 33 0 0 chr2 193629931 193629961 -59626622 + AT_rich Low_complexity Low_complexity 1 30 0 2204 100 0 0 chr2 193630102 193630393 -59626190 + AluSg SINE Alu 1 291 -19 325 345 136 11 chr2 193630533 193630724 -59625859 - MIR SINE MIR -5 257 43 23 33 0 0 chr2 193632522 193632552 -59624031 + AT_rich Low_complexity Low_complexity 1 30 0 544 232 16 0 chr2 193632907 193633032 -59623551 - MLT1B LTR MaLR 0 390 264 2432 138 3 0 chr2 193633032 193633395 -59623188 + THE1B LTR MaLR 1 364 0 486 49 0 0 chr2 193634489 193634550 -59622033 + (TA)n Simple_repeat Simple_repeat 1 61 0 23 0 0 0 chr2 193635320 193635343 -59621240 + AT_rich Low_complexity Low_complexity 1 23 0 2444 201 20 0 chr2 193636188 193636731 -59619852 - L1 LINE L1 -1507 4639 4086 1050 77 7 7 chr2 193636731 193636886 -59619697 + L1P4 LINE L1 5357 5511 -655 * 1504 179 42 3 chr2 193636883 193637229 -59619354 + L1PA16 LINE L1 5782 6164 -1 28 71 0 0 chr2 193637527 193637583 -59619000 + AT_rich Low_complexity Low_complexity 1 56 0 967 196 27 9 chr2 193638737 193639047 -59617536 - L1MC/D LINE L1 -743 5472 5246 * 1796 236 35 15 chr2 193639042 193639580 -59617003 - L1MC/D LINE L1 -1700 4515 3967 366 243 67 33 chr2 193639559 193639769 -59616814 - L1MC/D LINE L1 -4947 1449 1233 * 1601 261 139 19 chr2 193639838 193640643 -59615940 + L1ME1 LINE L1 5260 6161 -5 378 0 0 0 chr2 193640789 193640831 -59615752 + (CA)n Simple_repeat Simple_repeat 2 43 0 2147 91 47 0 chr2 193640981 193641277 -59615306 + AluSg SINE Alu 1 310 0 226 262 48 71 chr2 193642431 193642557 -59614026 + HAL1 LINE L1 808 930 -1577 419 311 55 6 chr2 193643117 193643300 -59613283 + HAL1 LINE L1 1526 1717 -790 209 184 0 0 chr2 193643306 193643344 -59613239 + (CCA)n Simple_repeat Simple_repeat 1 38 0 5169 173 13 37 chr2 193643727 193644933 -59611650 - L1MA10 LINE L1 -8 6326 5156 1093 157 24 0 chr2 193645779 193645989 -59610594 + L1MA6 LINE L1 6082 6296 -4 30 0 0 24 chr2 193645989 193646011 -59610572 + AT_rich Low_complexity Low_complexity 1 23 -17 2242 63 3 3 chr2 193646011 193646298 -59610285 - AluY SINE Alu -24 287 1 30 0 0 24 chr2 193646298 193646316 -59610267 + AT_rich Low_complexity Low_complexity 23 40 0 572 82 0 10 chr2 193647646 193647743 -59608840 + (TA)n Simple_repeat Simple_repeat 2 97 0 2170 99 0 0 chr2 193647791 193648083 -59608500 + AluSg SINE Alu 1 292 -18 230 0 33 0 chr2 193648414 193648444 -59608139 + (CAAAA)n Simple_repeat Simple_repeat 1 31 0 273 189 14 14 chr2 193648693 193648767 -59607816 + (TA)n Simple_repeat Simple_repeat 2 75 0 2275 268 114 52 chr2 193649053 193650429 -59606154 + L1MDb LINE L1 784 2213 -4193 543 274 130 4 chr2 193650440 193650707 -59605876 + L1ME1 LINE L1 5752 6051 -115 5431 120 37 3 chr2 193650799 193651497 -59605086 - L1PA16 LINE L1 -1 6165 5423 1674 163 0 4 chr2 193651497 193651767 -59604816 - AluSx SINE Alu -39 273 5 5431 120 37 3 chr2 193651767 193652108 -59604475 - L1PA16 LINE L1 -743 5423 5095 33 73 0 0 chr2 193652221 193652289 -59604294 + AT_rich Low_complexity Low_complexity 1 68 0 32 57 0 0 chr2 193653649 193653702 -59602881 + AT_rich Low_complexity Low_complexity 1 53 0 26 50 0 0 chr2 193653745 193653785 -59602798 + AT_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr2 193653938 193653960 -59602623 + AT_rich Low_complexity Low_complexity 1 22 0 456 256 78 41 chr2 193654305 193654524 -59602059 - L1MCc LINE L1 -4053 3069 2843 1345 148 9 0 chr2 193654607 193654817 -59601766 - AluJo SINE Alu -14 298 87 983 266 57 15 chr2 193654817 193655219 -59601364 - L1MCc LINE L1 -4373 2749 2331 1610 286 60 17 chr2 193655244 193656290 -59600293 - L1MCc LINE L1 -4887 1536 922 275 321 80 49 chr2 193656702 193657091 -59599492 - L1MCc LINE L1 -6004 419 19 180 228 70 0 chr2 193658172 193658229 -59598354 + MIR SINE MIR 156 216 -46 25 65 0 0 chr2 193659175 193659221 -59597362 + AT_rich Low_complexity Low_complexity 1 46 0 28 61 0 0 chr2 193660407 193660456 -59596127 + AT_rich Low_complexity Low_complexity 1 49 0 229 182 0 0 chr2 193660607 193660651 -59595932 - L1M LINE L1 -693 5428 5385 35 54 0 0 chr2 193661817 193661873 -59594710 + AT_rich Low_complexity Low_complexity 1 56 0 225 196 0 0 chr2 193662027 193662083 -59594500 + (TA)n Simple_repeat Simple_repeat 2 57 0 391 184 10 10 chr2 193662175 193662278 -59594305 + (TA)n Simple_repeat Simple_repeat 1 103 0 474 196 59 0 chr2 193662421 193662523 -59594060 - L1MB1 LINE L1 -1 6167 6060 21 0 0 0 chr2 193663308 193663329 -59593254 + AT_rich Low_complexity Low_complexity 1 21 0 508 257 56 39 chr2 193663463 193663642 -59592941 - MIR SINE MIR -64 198 17 649 281 68 37 chr2 193664355 193664867 -59591716 - L1M4 LINE L1 -923 5223 4696 32 67 0 0 chr2 193664960 193665020 -59591563 + AT_rich Low_complexity Low_complexity 1 60 0 373 264 46 67 chr2 193665132 193665416 -59591167 - L1M4 LINE L1 -1979 4167 3890 22 0 0 0 chr2 193665416 193665438 -59591145 + AT_rich Low_complexity Low_complexity 1 22 0 5043 131 6 14 chr2 193665438 193666263 -59590320 - L1MA2 LINE L1 0 6304 5487 3549 183 84 27 chr2 193666263 193667111 -59589472 + MER52A LTR ERV1 3 975 -780 627 203 0 8 chr2 193667107 193667230 -59589353 + MER52A LTR ERV1 1634 1755 0 * 2947 176 5 2 chr2 193667230 193667955 -59588628 - L1M1 LINE L1 -743 6822 6186 12522 189 30 35 chr2 193667958 193668789 -59587794 - L1M1 LINE L1 -4975 2590 1756 212 0 36 0 chr2 193668789 193668817 -59587766 + (TC)n Simple_repeat Simple_repeat 2 30 0 * 377 20 20 0 chr2 193668816 193668866 -59587717 + (TG)n Simple_repeat Simple_repeat 2 52 0 12522 189 30 35 chr2 193668817 193670625 -59585958 - L1M1 LINE L1 -5809 1756 15 356 305 14 25 chr2 193670663 193670945 -59585638 - L1M4 LINE L1 -2295 3851 3573 3726 194 28 12 chr2 193671810 193672587 -59583996 - L1PB4 LINE L1 -14 6142 5353 23 0 0 0 chr2 193672634 193672657 -59583926 + AT_rich Low_complexity Low_complexity 1 23 0 7613 92 3 0 chr2 193672657 193674495 -59582088 - L1PA7 LINE L1 -11 6143 4303 11555 111 18 1 chr2 193674495 193676247 -59580336 + L1PA7 LINE L1 2519 4300 -1846 258 31 0 0 chr2 193676243 193676275 -59580308 - L1PB4 LINE L1 -796 5365 5334 * 25 0 0 0 chr2 193676304 193676329 -59580254 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr2 193676404 193676428 -59580155 + AT_rich Low_complexity Low_complexity 1 24 0 3227 175 25 3 chr2 193676648 193677237 -59579346 + MER7C DNA MER2_type 1 602 0 507 295 32 46 chr2 193677455 193677672 -59578911 - MIR SINE MIR -3 259 46 201 211 0 0 chr2 193678037 193678075 -59578508 + L2 LINE L2 3264 3301 -12 450 269 90 0 chr2 193679403 193679537 -59577046 - MIR SINE MIR -13 249 104 51 70 0 0 chr2 193680404 193680504 -59576079 + AT_rich Low_complexity Low_complexity 1 100 0 22 0 0 0 chr2 193680621 193680643 -59575940 + AT_rich Low_complexity Low_complexity 1 22 0 761 112 60 0 chr2 193680907 193681023 -59575560 + PABL_A LTR ERV1 493 615 -45 26 0 0 0 chr2 193681185 193681211 -59575372 + AT_rich Low_complexity Low_complexity 1 26 0 1516 186 96 19 chr2 193682305 193682681 -59573902 - L1MA9 LINE L1 -38 6274 5870 1147 183 81 84 chr2 193682678 193683001 -59573582 + L1MA9 LINE L1 5549 5870 -442 * 245 204 19 0 chr2 193683450 193683504 -59573079 + (TATATG)n Simple_repeat Simple_repeat 2 56 0 208 237 0 0 chr2 193685869 193685907 -59570676 + (TG)n Simple_repeat Simple_repeat 2 39 0 225 356 67 52 chr2 193686031 193686298 -59570285 + L2 LINE L2 2286 2556 -758 385 191 19 0 chr2 193686457 193686562 -59570021 + CT-rich Low_complexity Low_complexity 2 108 0 288 280 98 76 chr2 193686668 193686904 -59569679 + L2 LINE L2 2857 3097 -216 1367 228 161 27 chr2 193686916 193686953 -59569630 + MLT2B1 LTR ERVL 2 33 -487 2200 111 67 0 chr2 193686953 193687294 -59569289 + THE1B LTR MaLR 1 364 0 1367 228 161 27 chr2 193687294 193687660 -59568923 + MLT2B1 LTR ERVL 33 459 -61 615 165 9 0 chr2 193687663 193687772 -59568811 - MLT1B-int LTR MaLR -1620 115 6 648 253 17 17 chr2 193687779 193687953 -59568630 - MLT1B LTR MaLR -2 388 215 21 0 0 0 chr2 193688033 193688054 -59568529 + AT_rich Low_complexity Low_complexity 1 21 0 423 275 28 7 chr2 193688164 193688305 -59568278 - MER115 DNA AcHobo -4 689 546 968 165 97 4 chr2 193688305 193688517 -59568066 - MLT2C2 LTR ERVL 0 464 160 685 235 96 0 chr2 193688597 193688857 -59567726 - Zaphod DNA AcHobo -152 3879 3595 419 223 256 3 chr2 193688855 193689237 -59567346 - Zaphod DNA AcHobo -3041 990 512 * 890 300 11 22 chr2 193689256 193689533 -59567050 - Zaphod DNA AcHobo -3755 276 3 435 279 149 0 chr2 193689751 193689905 -59566678 + LTR16A LTR ERVL 1 177 -273 711 299 46 18 chr2 193690150 193690431 -59566152 + HERV16-B1 LTR ERVL 120 408 -4588 914 320 47 40 chr2 193690646 193691337 -59565246 + ERVL LTR ERVL 4478 4695 -301 848 311 117 22 chr2 193691661 193692070 -59564513 + LTR16A LTR ERVL 2 449 -1 21 0 0 0 chr2 193692939 193692960 -59563623 + AT_rich Low_complexity Low_complexity 1 21 0 1855 186 29 50 chr2 193693209 193693252 -59563331 - MLT2D LTR ERVL -2 412 370 613 62 10 21 chr2 193693252 193693348 -59563235 + (TCTA)n Simple_repeat Simple_repeat 2 96 0 1855 186 29 50 chr2 193693348 193693723 -59562860 - MLT2D LTR ERVL -44 370 3 231 344 53 26 chr2 193694111 193694262 -59562321 - MER5B DNA MER1_type -23 155 1 988 257 66 33 chr2 193694791 193696653 -59559930 - L1ME1 LINE L1 0 6166 3983 1471 196 26 26 chr2 193696687 193696999 -59559584 - MER54B LTR ERVL 0 793 482 566 260 65 77 chr2 193697243 193697739 -59558844 - L1ME1 LINE L1 -2203 3943 3454 1145 56 17 28 chr2 193697752 193697932 -59558651 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 225 0 0 0 chr2 193697938 193697963 -59558620 + (CAGG)n Simple_repeat Simple_repeat 2 26 0 280 151 0 38 chr2 193697963 193698016 -59558567 + MLT2B2 LTR ERVL 465 515 0 2463 46 0 37 chr2 193698128 193698451 -59558132 + AluY SINE Alu 1 311 0 389 316 65 6 chr2 193700267 193700435 -59556148 + MIR SINE MIR 83 260 -2 200 114 0 29 chr2 193701078 193701113 -59555470 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 273 319 36 87 chr2 193702561 193702699 -59553884 - L2 LINE L2 -5 3267 3137 2322 26 4 0 chr2 193702699 193702966 -59553617 + AluY SINE Alu 35 302 -9 320 193 84 12 chr2 193703201 193703284 -59553299 - MER53 DNA DNA -100 89 1 248 299 62 10 chr2 193704595 193704692 -59551891 + MIR SINE MIR 14 115 -147 691 232 97 0 chr2 193704868 193705053 -59551530 + MER58 DNA MER1_type 50 252 -89 302 131 0 66 chr2 193705058 193705119 -59551464 + MER58 DNA MER1_type 2364 2420 0 909 231 34 37 chr2 193706833 193707128 -59549455 + L1ME2 LINE L1 5861 6154 -10 689 280 217 23 chr2 193707125 193707491 -59549092 + L1MC4a LINE L1 6343 6806 -979 * 644 317 48 16 chr2 193707841 193708090 -59548493 - MIR SINE MIR -1 261 5 393 216 0 0 chr2 193708789 193708877 -59547706 + (TA)n Simple_repeat Simple_repeat 1 88 0 192 125 0 0 chr2 193710746 193710778 -59545805 + (GA)n Simple_repeat Simple_repeat 1 32 0 400 296 75 51 chr2 193711797 193712050 -59544533 - MER90 LTR ERV1 0 614 356 183 42 0 0 chr2 193712622 193712646 -59543937 + (TA)n Simple_repeat Simple_repeat 2 25 0 27 0 0 0 chr2 193713164 193713191 -59543392 + AT_rich Low_complexity Low_complexity 1 27 0 468 267 23 7 chr2 193713792 193714063 -59542520 + (TA)n Simple_repeat Simple_repeat 1 275 0 22 0 0 0 chr2 193714464 193714486 -59542097 + AT_rich Low_complexity Low_complexity 1 22 0 313 86 35 0 chr2 193714746 193714804 -59541779 + (TA)n Simple_repeat Simple_repeat 1 60 0 235 214 0 0 chr2 193714860 193714916 -59541667 + L1ME1 LINE L1 2865 2920 -3226 1440 218 0 7 chr2 193714916 193715209 -59541374 + AluJo SINE Alu 1 291 -21 1327 233 0 10 chr2 193715220 193715516 -59541067 + AluJo SINE Alu 1 293 -19 1385 264 56 5 chr2 193715517 193716071 -59540512 + L1ME1 LINE L1 3092 3673 -2473 233 111 0 0 chr2 193716079 193716115 -59540468 + L1MA9 LINE L1 2 37 -6104 610 296 98 73 chr2 193716126 193716356 -59540227 + L1MA9 LINE L1 247 489 -5652 1829 137 58 0 chr2 193716356 193716482 -59540101 + AluSx SINE Alu 1 118 -194 186 71 0 0 chr2 193716482 193716510 -59540073 + (CAA)n Simple_repeat Simple_repeat 3 30 0 1829 137 58 0 chr2 193716510 193716675 -59539908 + AluSx SINE Alu 118 309 -3 610 296 98 73 chr2 193716675 193716772 -59539811 + L1MA9 LINE L1 489 582 -5559 9897 199 52 12 chr2 193716799 193719996 -59536587 + L1MA9 LINE L1 2891 6232 -144 237 108 0 0 chr2 193719996 193720033 -59536550 + (CA)n Simple_repeat Simple_repeat 2 38 0 9897 199 52 12 chr2 193720033 193720183 -59536400 + L1MA9 LINE L1 6232 6375 -1 631 293 120 0 chr2 193720233 193720424 -59536159 + MER58A DNA MER1_type 3 216 -8 283 271 47 28 chr2 193720433 193720540 -59536043 + L1ME3 LINE L1 6046 6154 -8 3457 251 78 45 chr2 193720577 193723000 -59533583 + L1ME1 LINE L1 3663 6156 -10 2014 97 3 42 chr2 193723197 193723506 -59533077 + AluSc SINE Alu 1 297 -12 525 16 0 0 chr2 193725047 193725109 -59531474 + (GA)n Simple_repeat Simple_repeat 1 62 0 2338 158 39 7 chr2 193726336 193726747 -59529836 + MSTB LTR MaLR 3 426 0 1331 169 19 88 chr2 193726840 193727148 -59529435 + AluJo SINE Alu 2 288 -24 317 258 96 48 chr2 193727172 193727339 -59529244 + HERVL LTR ERVL 4680 4854 -631 251 339 16 32 chr2 193728043 193728167 -59528416 - MIR3 SINE MIR 0 208 87 24 32 0 0 chr2 193728967 193728998 -59527585 + AT_rich Low_complexity Low_complexity 1 31 0 657 159 9 0 chr2 193730183 193730296 -59526287 + FLAM_C SINE Alu 30 143 0 828 196 0 7 chr2 193730322 193730506 -59526077 + AluJb SINE Alu 136 318 0 445 275 209 19 chr2 193730676 193731087 -59525496 - HAL1 LINE L1 -1247 1260 772 436 341 28 6 chr2 193731108 193731290 -59525293 - HAL1 LINE L1 -1805 702 517 415 349 133 16 chr2 193731416 193731731 -59524852 - HAL1 LINE L1 -2155 352 1 21 104 0 0 chr2 193732570 193732647 -59523936 + AT_rich Low_complexity Low_complexity 1 77 0 22 80 0 0 chr2 193732882 193732932 -59523651 + AT_rich Low_complexity Low_complexity 1 50 0 22 0 0 0 chr2 193733009 193733031 -59523552 + AT_rich Low_complexity Low_complexity 1 22 0 818 350 71 9 chr2 193733496 193733933 -59522650 + LTR33 LTR ERVL 34 497 -24 25 0 0 0 chr2 193733981 193734006 -59522577 + AT_rich Low_complexity Low_complexity 1 25 0 281 236 28 69 chr2 193734095 193734167 -59522416 + L2 LINE L2 3243 3311 -2 1675 234 40 3 chr2 193735189 193735569 -59521014 + MLT2D LTR ERVL 1 394 -20 213 39 0 0 chr2 193735569 193735595 -59520988 + (TC)n Simple_repeat Simple_repeat 2 27 0 1277 224 115 58 chr2 193736085 193736717 -59519866 + LTR48 LTR ERV1 1 644 0 277 259 136 80 chr2 193736757 193737043 -59519540 + LTR48-int LTR ERV1 40 341 -5990 1011 199 55 58 chr2 193737169 193737463 -59519120 + LTR48-int LTR ERV1 296 363 -4573 225 0 0 0 chr2 193737463 193737488 -59519095 + (TA)n Simple_repeat Simple_repeat 2 26 0 1011 199 55 58 chr2 193737488 193737733 -59518850 + LTR48-int LTR ERV1 363 607 -4329 362 234 103 0 chr2 193737789 193737896 -59518687 + LTR23-int LTR ERV1 1912 2029 -4302 401 273 15 23 chr2 193737912 193738044 -59518539 + LTR23-int LTR ERV1 859 989 -4134 370 43 0 0 chr2 193738048 193738094 -59518489 + MER34C LTR ERV1 161 206 -379 218 294 8 0 chr2 193738096 193738206 -59518377 + (TA)n Simple_repeat Simple_repeat 2 115 -6 1746 163 78 0 chr2 193738206 193738526 -59518057 + MER7A DNA MER2_type 1 343 -3 218 294 8 0 chr2 193738526 193738534 -59518049 + (TA)n Simple_repeat Simple_repeat 115 121 0 2049 121 7 3 chr2 193738711 193739009 -59517574 + AluSq SINE Alu 1 299 -14 591 228 16 16 chr2 193739195 193739322 -59517261 + MSTD LTR MaLR 1 127 -269 730 205 141 0 chr2 193739371 193739527 -59517056 + MSTD LTR MaLR 219 396 0 183 114 0 0 chr2 193740111 193740146 -59516437 + (T)n Simple_repeat Simple_repeat 1 35 0 2099 114 0 29 chr2 193740308 193740624 -59515959 + AluSg1 SINE Alu 1 307 -2 1816 219 46 42 chr2 193740692 193741168 -59515415 - MLT1D LTR MaLR 0 505 28 23 54 0 0 chr2 193741235 193741272 -59515311 + AT_rich Low_complexity Low_complexity 1 37 0 426 277 133 43 chr2 193741694 193742148 -59514435 + L1MCa LINE L1 2176 2700 -3726 558 318 63 42 chr2 193742167 193742598 -59513985 + L1MCa LINE L1 2775 3214 -3212 51 79 0 0 chr2 193743629 193743743 -59512840 + AT_rich Low_complexity Low_complexity 1 114 0 594 293 101 11 chr2 193744149 193744583 -59512000 - L1M4 LINE L1 -1094 5288 4816 667 250 79 29 chr2 193744684 193745047 -59511536 - L1MEc LINE L1 -4874 1545 1115 493 238 105 0 chr2 193745095 193745115 -59511468 - L1MA10 LINE L1 -1 6333 6314 1717 275 35 39 chr2 193745115 193745242 -59511341 - L1ME1 LINE L1 -26 6140 6014 1719 157 58 25 chr2 193745242 193745605 -59510978 - THE1C LTR MaLR 0 375 1 9510 130 23 33 chr2 193745605 193747201 -59509382 - THE1C-int LTR MaLR 0 1580 1 1702 162 55 25 chr2 193747201 193747565 -59509018 - THE1C LTR MaLR 0 375 1 1717 275 35 39 chr2 193747565 193748111 -59508472 - L1ME1 LINE L1 -149 6017 5467 351 272 44 11 chr2 193748107 193748287 -59508296 - L1MEc LINE L1 -5176 1196 1011 * 489 279 82 66 chr2 193748683 193749049 -59507534 - L1MEc LINE L1 -5989 574 203 276 301 9 35 chr2 193749043 193749156 -59507427 - L1MEd LINE L1 -4923 1196 1087 * 233 347 75 14 chr2 193749555 193749702 -59506881 - L2 LINE L2 -995 2319 2164 23 33 0 0 chr2 193749964 193749994 -59506589 + AT_rich Low_complexity Low_complexity 1 30 0 801 129 22 17 chr2 193750233 193750411 -59506172 + CT-rich Low_complexity Low_complexity 2 180 0 302 229 0 14 chr2 193750427 193750497 -59506086 - L1MA9 LINE L1 -116 6196 6128 1525 220 43 51 chr2 193750499 193750986 -59505597 - L1 LINE L1 -785 5361 4879 21 71 0 0 chr2 193751595 193751637 -59504946 + AT_rich Low_complexity Low_complexity 1 42 0 28 29 0 0 chr2 193751785 193751820 -59504763 + AT_rich Low_complexity Low_complexity 1 35 0 426 216 0 0 chr2 193751866 193751954 -59504629 - AluS SINE Alu 0 309 222 1891 125 16 3 chr2 193752336 193752455 -59504128 - L1P LINE L1 -970 5176 5060 2573 105 64 7 chr2 193752455 193752832 -59503751 + MLT2A1 LTR ERVL 1 406 -38 405 0 0 0 chr2 193752832 193752877 -59503706 + (TA)n Simple_repeat Simple_repeat 1 45 0 2573 105 64 7 chr2 193752877 193752919 -59503664 + MLT2A1 LTR ERVL 406 444 0 1891 125 16 3 chr2 193752919 193753110 -59503473 - L1P LINE L1 -1086 5060 4862 5937 98 20 2 chr2 193753115 193754051 -59502532 + L1PA8A LINE L1 5178 6128 -3 222 320 156 25 chr2 193756540 193756662 -59499921 + L2 LINE L2 2232 2369 -945 211 200 36 36 chr2 193756823 193756878 -59499705 + L3 LINE CR1 1521 1575 -2 21 57 0 0 chr2 193756997 193757032 -59499551 + AT_rich Low_complexity Low_complexity 1 35 0 6818 58 42 0 chr2 193757253 193758114 -59498469 + MER11D LTR ERVK 1 897 0 22 0 0 0 chr2 193758752 193758774 -59497809 + AT_rich Low_complexity Low_complexity 1 22 0 330 336 150 54 chr2 193759145 193759592 -59496991 - LTR16C LTR ERVL 0 491 2 34 0 0 0 chr2 193759775 193759809 -59496774 + AT_rich Low_complexity Low_complexity 1 34 0 279 324 43 14 chr2 193761716 193761855 -59494728 - MIR SINE MIR -10 252 110 1184 311 55 18 chr2 193763120 193763920 -59492663 + L1MC/D LINE L1 1536 2365 -4031 693 230 61 16 chr2 193763959 193764251 -59492332 + L1MC/D LINE L1 5213 5517 -714 1682 192 52 52 chr2 193764253 193764680 -59491903 + MER76 LTR ERV 2 428 -260 353 310 7 14 chr2 193764680 193764822 -59491761 + L1MC/D LINE L1 5532 5672 -741 23 54 0 0 chr2 193764823 193764860 -59491723 + AT_rich Low_complexity Low_complexity 1 37 0 836 242 8 23 chr2 193765094 193765358 -59491225 + L1ME1 LINE L1 4579 4838 -1308 4457 193 31 30 chr2 193765372 193766468 -59490115 - L1MC2 LINE L1 -8 6336 5241 6780 240 32 43 chr2 193766526 193766922 -59489661 + L1MB7 LINE L1 2749 3148 -3105 2026 127 3 7 chr2 193766922 193767214 -59489369 + AluSx SINE Alu 2 292 -20 6780 240 32 43 chr2 193767214 193768869 -59487714 + L1MB7 LINE L1 3148 4750 -1503 1800 145 47 7 chr2 193768869 193769165 -59487418 - AluSq SINE Alu 0 313 6 6780 240 32 43 chr2 193769165 193770635 -59485948 + L1MB7 LINE L1 4750 6234 -19 1365 266 158 21 chr2 193770668 193771300 -59485283 + L1ME1 LINE L1 5432 6150 -16 5168 175 19 29 chr2 193771321 193772330 -59484253 + L1P LINE L1 11 1009 -5137 458 147 0 0 chr2 193772330 193772398 -59484185 + LTR13 LTR ERVK 1 68 -939 261 91 0 0 chr2 193772398 193772431 -59484152 + LTR13 LTR ERVK 34 66 -941 6169 134 19 19 chr2 193772431 193773406 -59483177 + LTR13 LTR ERVK 32 1007 0 30973 98 8 5 chr2 193773406 193778057 -59478526 + L1ME LINE L1 1004 5665 -501 30 0 0 0 chr2 193778630 193778660 -59477923 + AT_rich Low_complexity Low_complexity 1 30 0 4941 172 53 11 chr2 193778869 193779877 -59476706 - L1MC1 LINE L1 -30 6583 5534 1642 254 50 6 chr2 193779922 193780406 -59476177 - L1MC1 LINE L1 -1145 5281 4777 * 2161 265 45 27 chr2 193780403 193781274 -59475309 - L1PA12 LINE L1 -4543 3031 2221 451 300 33 7 chr2 193781990 193782140 -59474443 - L1PA12 LINE L1 -5277 2297 2144 716 326 40 53 chr2 193782275 193782726 -59473857 - L1PA12 LINE L1 -6339 1235 791 778 217 53 15 chr2 193782737 193783064 -59473519 - L1MC1 LINE L1 -3947 2479 2273 * 3371 178 25 60 chr2 193783034 193783786 -59472797 - L1MC1 LINE L1 -4862 1045 322 543 174 0 0 chr2 193783799 193783906 -59472677 + AluSg/x SINE Alu 196 302 0 1551 187 21 0 chr2 193783910 193784199 -59472384 - L1MC1 LINE L1 -6108 318 24 210 125 0 50 chr2 193784611 193784651 -59471932 + (TATATG)n Simple_repeat Simple_repeat 5 42 0 239 226 36 24 chr2 193784651 193784735 -59471848 + L1ME3 LINE L1 6071 6155 -7 459 398 13 4 chr2 193785119 193785355 -59471228 + MIR SINE MIR 6 243 -19 1757 165 149 11 chr2 193785733 193786109 -59470474 + MSTA LTR MaLR 1 428 0 255 103 0 0 chr2 193787178 193787217 -59469366 + (TG)n Simple_repeat Simple_repeat 2 40 0 2141 139 19 16 chr2 193787880 193788254 -59468329 - THE1C LTR MaLR 0 375 1 735 306 120 19 chr2 193788686 193789052 -59467531 + LTR16C LTR ERVL 89 491 0 1747 195 101 5 chr2 193789363 193789789 -59466794 + MLT1C LTR MaLR 1 467 0 2299 98 0 0 chr2 193790517 193790814 -59465769 - AluSg SINE Alu -13 297 1 257 228 50 99 chr2 193791640 193791842 -59464741 - L1ME3A LINE L1 -135 6035 5844 536 236 75 11 chr2 193792133 193792307 -59464276 + L1ME3A LINE L1 5986 6170 0 547 300 57 55 chr2 193792945 193793415 -59463168 - MER110 LTR ERV1 0 468 41 29 28 0 0 chr2 193794154 193794190 -59462393 + AT_rich Low_complexity Low_complexity 1 36 0 3703 163 33 0 chr2 193794249 193794856 -59461727 + Ricksha DNA DNA 26 652 -1394 22 0 0 0 chr2 193794856 193794878 -59461705 + AT_rich Low_complexity Low_complexity 1 22 0 441 252 94 0 chr2 193794881 193795008 -59461575 - Ricksha DNA DNA -1902 144 6 702 304 74 4 chr2 193795025 193795268 -59461315 + ERVL LTR ERVL 444 703 -5061 691 307 36 4 chr2 193795305 193795464 -59461119 + ERVL LTR ERVL 814 983 -4781 405 0 0 0 chr2 193795464 193795509 -59461074 + (TA)n Simple_repeat Simple_repeat 1 45 0 691 307 36 4 chr2 193795509 193795574 -59461009 + ERVL LTR ERVL 983 1045 -4719 * 1335 275 71 5 chr2 193795567 193795949 -59460634 + ERVL LTR ERVL 1529 1935 -3829 1974 137 60 23 chr2 193797726 193798077 -59458506 - THE1B LTR MaLR 0 364 1 22 0 0 0 chr2 193798599 193798621 -59457962 + AT_rich Low_complexity Low_complexity 1 22 0 1672 187 42 21 chr2 193799664 193800070 -59456513 + MER67C LTR ERV1 1 420 -244 247 257 133 53 chr2 193800070 193800183 -59456400 + MER67D LTR ERV1 362 483 -31 442 110 236 87 chr2 193800524 193800651 -59455932 - MER4C LTR ERV1 -18 447 302 1710 187 47 29 chr2 193800832 193801212 -59455371 - MLT1B LTR MaLR 0 390 4 309 68 0 0 chr2 193801506 193801550 -59455033 + (TC)n Simple_repeat Simple_repeat 1 44 0 204 81 0 54 chr2 193802247 193802284 -59454299 + (TAAAA)n Simple_repeat Simple_repeat 3 37 0 227 269 75 15 chr2 193802674 193802741 -59453842 - L3 LINE CR1 -3 1574 1504 1065 164 92 0 chr2 193803123 193803318 -59453265 - AluJb SINE Alu -14 298 86 24 32 0 0 chr2 193803361 193803392 -59453191 + AT_rich Low_complexity Low_complexity 1 31 0 1309 26 0 0 chr2 193803625 193803780 -59452803 + L1PA4 LINE L1 5968 6122 -33 1821 163 0 0 chr2 193803781 193804075 -59452508 + AluJb SINE Alu 14 307 -5 3643 236 46 1 chr2 193804076 193805083 -59451500 + L1 LINE L1 2500 3551 -2595 333 345 71 12 chr2 193805454 193805706 -59450877 - HERVL LTR ERVL -2214 3440 3174 290 318 8 40 chr2 193806030 193806156 -59450427 - HERVL LTR ERVL -3230 2424 2303 1666 172 22 44 chr2 193806391 193806643 -59449940 - L1MA4 LINE L1 -8 6292 6051 2099 125 0 0 chr2 193806643 193806940 -59449643 - AluY SINE Alu -14 297 1 1666 172 22 44 chr2 193806940 193807094 -59449489 - L1MA4 LINE L1 -249 6051 5895 234 316 38 25 chr2 193807098 193807177 -59449406 + L2 LINE L2 1769 1848 -1466 21 0 0 0 chr2 193807753 193807774 -59448809 + AT_rich Low_complexity Low_complexity 1 21 0 340 280 76 57 chr2 193808213 193808424 -59448159 - MIR SINE MIR -21 241 27 5298 192 27 20 chr2 193809118 193809397 -59447186 - L1MA5 LINE L1 0 6300 6024 2139 118 0 19 chr2 193809397 193809710 -59446873 - AluSg SINE Alu -3 307 1 5298 192 27 20 chr2 193809710 193811422 -59445161 - L1MA5 LINE L1 -276 6024 4299 4262 194 38 9 chr2 193811436 193812776 -59443807 - L1MA4 LINE L1 -83 6919 4124 1195 178 43 13 chr2 193812778 193813008 -59443575 - MSTB LTR MaLR 0 426 190 3078 244 54 27 chr2 193813019 193813975 -59442608 - L1MA4 LINE L1 -4774 2075 1094 24 53 0 0 chr2 193814952 193814990 -59441593 + AT_rich Low_complexity Low_complexity 1 38 0 4356 218 67 8 chr2 193815232 193817405 -59439178 - L1MA3 LINE L1 -1 7723 5303 417 210 12 0 chr2 193817432 193817513 -59439070 - L1MA3 LINE L1 -2574 4991 4910 17187 180 30 5 chr2 193817554 193820608 -59435975 - L1MA3 LINE L1 -4427 3138 9 4491 65 2 0 chr2 193821163 193821734 -59434849 - L1PA6 LINE L1 0 6154 5583 682 105 0 0 chr2 193821760 193821855 -59434728 - L1P3 LINE L1 -6365 96 2 3910 205 21 8 chr2 193821936 193822315 -59434268 + Ricksha DNA DNA 6 400 -2846 1733 136 185 22 chr2 193822315 193822683 -59433900 - MSTA LTR MaLR 0 428 1 3910 205 21 8 chr2 193822683 193823010 -59433573 + Ricksha DNA DNA 400 721 -2525 22 56 0 0 chr2 193823131 193823167 -59433416 + AT_rich Low_complexity Low_complexity 1 36 0 2890 214 27 4 chr2 193823518 193824224 -59432359 + L1 LINE L1 3850 4571 -1575 184 339 125 49 chr2 193824412 193824781 -59431802 + L2 LINE L2 2334 2730 -584 204 228 0 0 chr2 193826862 193826919 -59429664 + (TA)n Simple_repeat Simple_repeat 2 58 0 1939 139 0 3 chr2 193827047 193827342 -59429241 + AluSc SINE Alu 1 294 -15 2347 142 0 6 chr2 193827988 193828354 -59428229 + THE1B LTR MaLR 1 364 0 9537 123 35 38 chr2 193828354 193829937 -59426646 + THE1B-int LTR MaLR 1 1578 -2 2202 133 31 8 chr2 193829939 193830293 -59426290 + THE1B LTR MaLR 1 362 -2 183 327 58 29 chr2 193830479 193830583 -59426000 - MIR SINE MIR -8 254 148 22 35 0 0 chr2 193831337 193831366 -59425217 + AT_rich Low_complexity Low_complexity 1 29 0 184 263 88 50 chr2 193831513 193831593 -59424990 + MIR SINE MIR 32 114 -148 294 328 0 17 chr2 193831627 193831743 -59424840 - L2 LINE L2 0 3313 3200 23 0 0 0 chr2 193831873 193831896 -59424687 + AT_rich Low_complexity Low_complexity 1 23 0 1907 212 24 5 chr2 193831926 193832350 -59424233 - L1MB5 LINE L1 -68 6106 5675 455 280 34 0 chr2 193832424 193832542 -59424041 - LTR33 LTR ERVL -344 177 56 400 173 74 0 chr2 193832545 193832626 -59423957 + AluSg/x SINE Alu 209 295 -17 180 0 0 0 chr2 193832904 193832924 -59423659 + (CAAAAA)n Simple_repeat Simple_repeat 4 23 0 729 154 69 0 chr2 193832936 193833093 -59423490 + AluSg/x SINE Alu 144 309 0 753 0 20 10 chr2 193833595 193833693 -59422890 + (TAGA)n Simple_repeat Simple_repeat 1 99 0 2257 92 3 0 chr2 193834809 193835103 -59421480 - AluY SINE Alu -16 295 1 1202 202 190 20 chr2 193835107 193835419 -59421164 + MLT2D LTR ERVL 5 472 -43 201 39 0 0 chr2 193835419 193835445 -59421138 + (CA)n Simple_repeat Simple_repeat 2 27 0 1202 202 190 20 chr2 193835445 193835485 -59421098 + MLT2D LTR ERVL 472 504 -11 31 0 0 0 chr2 193835637 193835668 -59420915 + AT_rich Low_complexity Low_complexity 1 31 0 32 26 0 0 chr2 193836733 193836772 -59419811 + AT_rich Low_complexity Low_complexity 1 39 0 230 352 113 0 chr2 193836842 193837001 -59419582 - L3 LINE CR1 -752 825 649 2417 64 0 3 chr2 193837045 193837343 -59419240 - AluY SINE Alu -14 297 1 2670 154 14 0 chr2 193837401 193837823 -59418760 + MSTA LTR MaLR 1 428 0 29 70 0 0 chr2 193838071 193838128 -59418455 + AT_rich Low_complexity Low_complexity 1 57 0 2165 73 0 41 chr2 193838499 193838813 -59417770 - AluY SINE Alu 0 311 11 210 279 0 15 chr2 193839751 193839819 -59416764 + (TA)n Simple_repeat Simple_repeat 1 67 0 1403 230 3 3 chr2 193840145 193840436 -59416147 - AluJo SINE Alu -17 295 5 21 36 0 0 chr2 193840629 193840657 -59415926 + AT_rich Low_complexity Low_complexity 1 28 0 2039 111 7 14 chr2 193841399 193841688 -59414895 + AluSc SINE Alu 1 287 -22 260 309 83 17 chr2 193841712 193841833 -59414750 - MLT1G LTR MaLR 0 590 421 289 57 8 0 chr2 193841892 193841940 -59414643 - MLT2A1 LTR ERVL -40 404 363 * 1538 63 0 0 chr2 193841939 193842130 -59414453 - MLT2A1 LTR ERVL -253 191 1 10596 96 9 0 chr2 193842130 193843552 -59413031 - HERVL-A1 LTR ERVL 0 5654 4220 * 22339 113 36 43 chr2 193843542 193846893 -59409690 - HERVL-A1 LTR ERVL -1835 3819 496 2082 128 0 0 chr2 193846893 193847197 -59409386 + AluSx SINE Alu 9 312 0 22339 113 36 43 chr2 193847197 193847690 -59408893 - HERVL-A1 LTR ERVL -5158 496 1 430 56 0 0 chr2 193847690 193847744 -59408839 - MLT2A1 LTR ERVL 0 444 391 2822 155 41 16 chr2 193847746 193848235 -59408348 + Tigger2 DNA MER2_type 1975 2475 -243 1033 104 25 2 chr2 193848230 193848431 -59408152 + Tigger7 DNA MER2_type 2334 2586 -1 * 714 183 71 24 chr2 193848484 193848653 -59407930 - L1 LINE L1 -1978 4168 3992 3028 87 5 2 chr2 193848653 193849056 -59407527 + MLT2A1 LTR ERVL 1 404 -40 311 172 16 31 chr2 193849067 193849131 -59407452 - Tigger2 DNA MER2_type -2154 564 502 612 92 61 0 chr2 193849133 193849231 -59407352 - Ricksha DNA DNA -110 3141 3038 8822 148 13 8 chr2 193849270 193850690 -59405893 - Tigger2 DNA MER2_type -789 1929 502 1298 108 42 5 chr2 193850690 193850904 -59405679 - Ricksha DNA DNA -110 3136 2915 2601 149 62 4 chr2 193850906 193851377 -59405206 - Tigger2 DNA MER2_type -2219 499 2 686 201 7 52 chr2 193851377 193851527 -59405056 - MER44D DNA MER2_type -195 414 2 787 245 78 17 chr2 193851532 193851877 -59404706 + L1MCb LINE L1 759 1172 -5392 831 209 127 23 chr2 193852066 193852373 -59404210 + L1MCb LINE L1 2269 2607 -3957 1622 219 23 9 chr2 193852394 193852809 -59403774 + MLT2B1 LTR ERVL 1 464 -51 1102 156 62 14 chr2 193852829 193853040 -59403543 + MER7A DNA MER2_type 1 219 -127 3588 165 30 19 chr2 193853047 193854393 -59402190 - Ricksha DNA DNA -39 3207 1823 1581 186 4 4 chr2 193854394 193854674 -59401909 - Ricksha DNA DNA -2958 288 9 721 153 22 51 chr2 193854684 193854821 -59401762 + MER7A DNA MER2_type 205 337 0 386 264 0 0 chr2 193854823 193854971 -59401612 + (ACTG)n Simple_repeat Simple_repeat 3 150 0 813 266 78 0 chr2 193854993 193855312 -59401271 + L1MCb LINE L1 2629 2972 -3592 * 1627 189 64 5 chr2 193855279 193855655 -59400928 + L1MC3 LINE L1 7806 8203 0 191 188 21 0 chr2 193856311 193856359 -59400224 + CT-rich Low_complexity Low_complexity 2 50 0 21 0 0 0 chr2 193856791 193856812 -59399771 + AT_rich Low_complexity Low_complexity 1 21 0 7426 139 20 25 chr2 193857669 193858943 -59397640 - L1P3 LINE L1 -5185 1276 10 14426 121 9 1 chr2 193858954 193862133 -59394450 + L1PA8 LINE L1 2957 6154 -18 371 233 13 138 chr2 193862824 193862983 -59393600 - MER5B DNA MER1_type 0 178 40 250 217 43 0 chr2 193863548 193863640 -59392943 + MER113 DNA MER1_type? 80 175 -346 233 222 0 0 chr2 193863770 193863824 -59392759 + MER113 DNA MER1_type? 365 418 -103 2100 111 10 0 chr2 193863838 193864135 -59392448 - AluSq SINE Alu -13 300 1 2400 71 0 0 chr2 193864924 193865219 -59391364 - AluY SINE Alu -16 295 1 341 206 0 0 chr2 193865788 193865851 -59390732 - L1MB1 LINE L1 -279 5889 5827 43 35 0 0 chr2 193865880 193865937 -59390646 + AT_rich Low_complexity Low_complexity 1 57 0 292 264 97 0 chr2 193867286 193867392 -59389191 - L1MB1 LINE L1 -620 5549 5429 1707 175 11 3 chr2 193867393 193867679 -59388904 - AluJb SINE Alu -21 291 4 315 0 0 0 chr2 193867961 193867996 -59388587 + (TG)n Simple_repeat Simple_repeat 2 36 0 32 67 0 0 chr2 193868337 193868397 -59388186 + AT_rich Low_complexity Low_complexity 1 60 0 2090 118 3 10 chr2 193868406 193868720 -59387863 + AluSx SINE Alu 1 312 0 26 0 0 0 chr2 193868979 193869005 -59387578 + AT_rich Low_complexity Low_complexity 1 26 0 30 0 0 0 chr2 193869119 193869149 -59387434 + AT_rich Low_complexity Low_complexity 1 30 0 864 198 24 0 chr2 193869821 193869988 -59386595 + AluJb SINE Alu 138 308 -4 22 0 0 0 chr2 193870326 193870348 -59386235 + AT_rich Low_complexity Low_complexity 1 22 0 571 298 44 6 chr2 193870485 193870666 -59385917 - MIR SINE MIR -59 203 16 429 339 184 30 chr2 193871371 193871410 -59385173 - L1M4 LINE L1 -5685 857 825 234 0 0 0 chr2 193871410 193871436 -59385147 + (CACAA)n Simple_repeat Simple_repeat 4 29 0 429 339 184 30 chr2 193871436 193871836 -59384747 - L1M4 LINE L1 -5717 825 350 1150 27 14 0 chr2 193871870 193872016 -59384567 + L1PA4 LINE L1 6008 6155 0 332 270 29 69 chr2 193872111 193872285 -59384298 - L1M4 LINE L1 -6361 181 15 21 82 0 0 chr2 193872618 193872667 -59383916 + AT_rich Low_complexity Low_complexity 1 49 0 248 228 206 11 chr2 193872728 193872820 -59383763 - MLT1D LTR MaLR -185 320 211 591 172 30 0 chr2 193872824 193872923 -59383660 - MLT1D LTR MaLR -403 102 1 262 255 204 10 chr2 193873552 193873650 -59382933 + L2 LINE L2 3179 3295 -18 366 298 31 37 chr2 193874118 193874279 -59382304 + MLT1J LTR MaLR 257 416 -95 2800 109 80 0 chr2 193874539 193874989 -59381594 - LTR19A LTR ERV1 0 486 1 22 56 0 0 chr2 193875429 193875465 -59381118 + AT_rich Low_complexity Low_complexity 1 36 0 351 332 118 0 chr2 193875475 193875686 -59380897 - HAL1 LINE L1 -1159 1348 1113 2122 121 7 0 chr2 193875840 193876137 -59380446 - AluSq SINE Alu -14 299 1 344 175 258 0 chr2 193876429 193876526 -59380057 - L1MC4 LINE L1 -131 7911 7790 * 608 222 104 102 chr2 193876522 193876905 -59379678 - L1MC4 LINE L1 -12 8030 7647 24 53 0 0 chr2 193877625 193877663 -59378920 + AT_rich Low_complexity Low_complexity 1 38 0 548 244 210 103 chr2 193877968 193878830 -59377753 - MER52A LTR ERV1 0 1755 202 180 216 0 0 chr2 193879090 193879141 -59377442 + (CATATA)n Simple_repeat Simple_repeat 3 53 0 474 281 50 25 chr2 193879392 193879552 -59377031 + LTR33 LTR ERVL 21 184 -337 233 302 73 50 chr2 193879628 193879807 -59376776 + LTR33 LTR ERVL 292 474 -47 1564 192 24 37 chr2 193880775 193881150 -59375433 + MLT1B LTR MaLR 13 382 -8 1647 65 18 23 chr2 193881152 193881208 -59375375 + AluSp SINE Alu 82 137 -176 2487 68 3 0 chr2 193881208 193881517 -59375066 + AluY SINE Alu 1 310 -1 1647 65 18 23 chr2 193881517 193881677 -59374906 + AluSp SINE Alu 137 297 -16 2119 127 16 30 chr2 193881734 193882103 -59374480 - THE1B LTR MaLR 0 364 1 383 280 83 99 chr2 193883077 193883644 -59372939 + L1MC4a LINE L1 4389 4946 -1200 2285 253 35 30 chr2 193883845 193884647 -59371936 + L1MC4a LINE L1 5256 6061 -1747 194 105 26 0 chr2 193884887 193884925 -59371658 + (CA)n Simple_repeat Simple_repeat 2 40 0 1465 226 0 3 chr2 193884930 193885213 -59371370 - AluJo SINE Alu -30 282 1 30 0 0 0 chr2 193885454 193885484 -59371099 + AT_rich Low_complexity Low_complexity 1 30 0 27 0 0 0 chr2 193885738 193885765 -59370818 + AT_rich Low_complexity Low_complexity 1 27 0 24 32 0 0 chr2 193886079 193886110 -59370473 + AT_rich Low_complexity Low_complexity 1 31 0 399 41 0 0 chr2 193887584 193887633 -59368950 + (CA)n Simple_repeat Simple_repeat 2 50 0 2438 77 0 0 chr2 193888290 193888600 -59367983 - AluY SINE Alu -1 310 1 482 297 29 25 chr2 193888781 193888878 -59367705 - L1MC5 LINE L1 -751 7210 7115 1974 164 11 32 chr2 193888878 193889177 -59367406 + THE1B LTR MaLR 1 292 -72 2410 77 0 3 chr2 193889177 193889489 -59367094 - AluY SINE Alu 0 311 1 1974 164 11 32 chr2 193889489 193889561 -59367022 + THE1B LTR MaLR 292 364 0 482 297 29 25 chr2 193889561 193889702 -59366881 - L1MC5 LINE L1 -846 7115 6971 1369 184 4 12 chr2 193889764 193890019 -59366564 - L1PA16 LINE L1 -1 6165 5913 22 56 0 0 chr2 193890843 193890879 -59365704 + AT_rich Low_complexity Low_complexity 1 36 0 367 298 41 41 chr2 193891305 193891523 -59365060 + L1ME4a LINE L1 5625 5842 -279 243 203 31 62 chr2 193891564 193891628 -59364955 - L2 LINE L2 -3 3310 3249 1012 211 98 31 chr2 193891807 193892125 -59364458 - MER2 DNA MER2_type -4 340 2 2246 232 18 11 chr2 193892169 193892712 -59363871 + Tigger6a DNA MER2_type 120 666 -417 586 245 10 78 chr2 193892713 193892917 -59363666 + MER58C DNA MER1_type 26 215 0 8345 116 4 1 chr2 193894093 193895318 -59361265 - L1P LINE L1 -1548 4598 3370 2012 111 0 88 chr2 193895385 193895727 -59360856 + AluSq SINE Alu 1 312 -1 678 217 50 39 chr2 193896072 193896252 -59360331 - AluJo SINE Alu -45 267 86 210 37 0 0 chr2 193896272 193896299 -59360284 + (TTG)n Simple_repeat Simple_repeat 2 28 0 407 286 65 45 chr2 193897823 193898022 -59358561 + MIR SINE MIR 44 246 -16 270 229 0 0 chr2 193899332 193899402 -59357181 + (TA)n Simple_repeat Simple_repeat 2 71 0 423 257 10 0 chr2 193899665 193899766 -59356817 + MER5A DNA MER1_type 10 111 -78 2155 70 35 0 chr2 193900581 193900867 -59355716 - AluY SINE Alu -15 296 1 42626 33 21 1 chr2 193900904 193906932 -59349651 - L1PA2 LINE L1 -2 6153 3 202 150 0 25 chr2 193907580 193907620 -59348963 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 187 290 92 34 chr2 193908587 193908733 -59347850 - MIR3 SINE MIR -58 150 8 3202 96 0 5 chr2 193910442 193910888 -59345695 + MLT2A1 LTR ERVL 1 444 0 22 99 0 0 chr2 193911098 193911169 -59345414 + AT_rich Low_complexity Low_complexity 1 71 0 28 29 0 0 chr2 193911180 193911215 -59345368 + AT_rich Low_complexity Low_complexity 1 35 0 26 0 0 0 chr2 193911850 193911876 -59344707 + AT_rich Low_complexity Low_complexity 1 26 0 1057 149 10 35 chr2 193912755 193913035 -59343548 + MER1B DNA MER1_type 1 339 0 3254 242 46 42 chr2 193913084 193914289 -59342294 - L1M4 LINE L1 -1750 4396 3187 4619 140 10 31 chr2 193914437 193914652 -59341931 - L1PA16 LINE L1 0 6166 5948 1995 150 3 10 chr2 193914652 193914966 -59341617 - AluSx SINE Alu 0 312 1 4619 140 10 31 chr2 193914966 193915529 -59341054 - L1PA16 LINE L1 -218 5948 5404 2129 184 10 5 chr2 193915529 193915916 -59340667 + Tigger2a DNA MER2_type 46 434 0 265 128 0 0 chr2 193916123 193916162 -59340421 - MLT2D LTR ERVL -10 404 366 239 68 68 34 chr2 193916167 193916226 -59340357 + (TCTA)n Simple_repeat Simple_repeat 3 63 0 954 204 6 0 chr2 193916230 193916402 -59340181 - MLT2D LTR ERVL -56 358 186 5292 130 15 41 chr2 193916411 193917303 -59339280 - L1PA13 LINE L1 -13 6150 5283 1910 159 0 0 chr2 193917303 193917598 -59338985 - AluSg SINE Alu -15 295 1 5292 130 15 41 chr2 193917598 193917674 -59338909 - L1PA13 LINE L1 -880 5283 5207 250 216 0 0 chr2 193918311 193918362 -59338221 + GA-rich Low_complexity Low_complexity 2 52 0 226 279 0 58 chr2 193918363 193918449 -59338134 - MLT2C2 LTR ERVL -48 416 336 563 150 0 67 chr2 193918536 193918656 -59337927 - MLT1E3 LTR MaLR -447 177 66 415 221 60 81 chr2 193918656 193918685 -59337898 - MLT2C1 LTR ERVL -232 165 20 372 287 133 7 chr2 193918827 193918977 -59337606 - MIR SINE MIR -2 260 92 551 89 13 0 chr2 193920069 193920148 -59336435 + MADE1 DNA Mariner 1 80 0 378 252 98 14 chr2 193922515 193922658 -59333925 + L1ME4a LINE L1 5728 5882 -239 863 265 38 0 chr2 193923872 193924083 -59332500 - MER97a DNA MER1_type? -381 513 295 3688 239 68 11 chr2 193924338 193925345 -59331238 - Tigger6a DNA MER2_type -13 1070 7 601 268 83 31 chr2 193925351 193925579 -59331004 - MER97c DNA MER1_type? -849 241 2 306 100 0 0 chr2 193925838 193925888 -59330695 + L1PB4 LINE L1 6107 6156 0 201 184 26 0 chr2 193927314 193927352 -59329231 + (TATATG)n Simple_repeat Simple_repeat 1 39 0 195 232 0 0 chr2 193927386 193927442 -59329141 + (TA)n Simple_repeat Simple_repeat 2 57 0 259 162 108 0 chr2 193927442 193927516 -59329067 + L1ME3A LINE L1 1633 1714 -4826 4389 178 31 13 chr2 193927721 193929155 -59327428 + L1P5 LINE L1 4327 5791 -365 330 255 0 43 chr2 193929162 193929256 -59327327 + L1MC4 LINE L1 6614 6703 -1339 260 303 0 0 chr2 193929257 193929346 -59327237 - L1MC4 LINE L1 -1340 6702 6614 * 283 308 0 0 chr2 193929269 193929360 -59327223 + L1MC4 LINE L1 6615 6705 -1337 243 236 0 0 chr2 193929364 193929436 -59327147 + (TA)n Simple_repeat Simple_repeat 2 73 0 282 97 27 39 chr2 193929440 193929505 -59327078 - L1M1 LINE L1 -491 5809 5744 * 1882 184 56 10 chr2 193929487 193929878 -59326705 + L1PB4 LINE L1 5746 6154 -2 263 297 34 0 chr2 193930271 193930389 -59326194 + L1ME3A LINE L1 2494 2615 -4106 21 0 0 0 chr2 193930433 193930454 -59326129 + AT_rich Low_complexity Low_complexity 1 21 0 2220 116 0 0 chr2 193930712 193931047 -59325536 + AluSc SINE Alu 1 335 0 24 32 0 0 chr2 193931097 193931128 -59325455 + AT_rich Low_complexity Low_complexity 1 31 0 461 245 111 43 chr2 193931171 193931424 -59325159 + L1ME3A LINE L1 3076 3345 -3195 2068 125 7 0 chr2 193931461 193931764 -59324819 - AluSc SINE Alu -4 305 1 1915 161 52 9 chr2 193931764 193932112 -59324471 - THE1B LTR MaLR -1 363 1 11277 103 5 1 chr2 193932114 193933686 -59322897 - THE1B-int LTR MaLR -2 1578 1 2123 147 42 11 chr2 193933686 193934039 -59322544 - THE1B LTR MaLR 0 364 1 481 291 34 6 chr2 193934172 193934347 -59322236 + L1ME3A LINE L1 3489 3668 -2872 8217 189 33 27 chr2 193934611 193936486 -59320097 + L1 LINE L1 3149 5034 -1112 394 129 16 0 chr2 193936906 193936968 -59319615 - MER61B LTR ERV1 -362 63 1 1852 118 50 105 chr2 193937015 193937397 -59319186 + MER61B LTR ERV1 65 425 0 291 305 17 0 chr2 193937398 193937516 -59319067 + L1ME3A LINE L1 5103 5222 -1318 226 330 39 0 chr2 193937586 193937689 -59318894 + MLT1H LTR MaLR 60 166 -383 321 256 165 23 chr2 193937874 193938007 -59318576 + MLT1H LTR MaLR 396 547 -2 1147 277 73 23 chr2 193938111 193938307 -59318276 + L1ME3A LINE L1 5931 6116 -448 1598 175 36 0 chr2 193938307 193938648 -59317935 + AluJb SINE Alu 1 351 0 1147 277 73 23 chr2 193938648 193938925 -59317658 + L1ME3A LINE L1 6116 6431 -133 432 256 90 22 chr2 193938946 193939215 -59317368 - L1MC/D LINE L1 -744 5471 5266 586 250 92 0 chr2 193939233 193939385 -59317198 + MER58A DNA MER1_type 31 196 -28 711 268 63 43 chr2 193939410 193939903 -59316680 - L1MC/D LINE L1 -4504 1892 1390 304 279 71 36 chr2 193940340 193940480 -59316103 + L2 LINE L2 3167 3311 -2 28 29 0 0 chr2 193940728 193940763 -59315820 + AT_rich Low_complexity Low_complexity 1 35 0 30 83 0 0 chr2 193941721 193941793 -59314790 + AT_rich Low_complexity Low_complexity 1 72 0 858 350 57 10 chr2 193942182 193942570 -59314013 - LTR16C LTR ERVL -43 448 43 227 247 94 0 chr2 193942617 193942702 -59313881 - L1MC4 LINE L1 -3 8039 7947 1358 86 76 5 chr2 193943400 193943610 -59312973 + L1MA3 LINE L1 6081 6305 0 22 0 0 0 chr2 193943610 193943632 -59312951 + AT_rich Low_complexity Low_complexity 1 22 0 322 132 15 15 chr2 193943632 193943700 -59312883 + GA-rich Low_complexity Low_complexity 3 70 0 1927 144 3 0 chr2 193943731 193944016 -59312567 + AluSp SINE Alu 1 286 -27 316 204 11 57 chr2 193944049 193944137 -59312446 - L1MC4 LINE L1 -1347 6695 6612 199 0 65 0 chr2 193944137 193944168 -59312415 + (TA)n Simple_repeat Simple_repeat 2 34 0 697 273 46 0 chr2 193944393 193944631 -59311952 + L1MEc LINE L1 577 825 -5571 1686 260 75 22 chr2 193944758 193945296 -59311287 + L1MEc LINE L1 2175 2711 -3504 2113 135 0 0 chr2 193945296 193945608 -59310975 + AluSx SINE Alu 1 312 0 1686 260 75 22 chr2 193945608 193945808 -59310775 + L1MEc LINE L1 2711 2899 -3316 2234 236 50 10 chr2 193945812 193946607 -59309976 + L1MEc LINE L1 2810 3636 -2579 736 242 10 20 chr2 193946627 193946825 -59309758 + L1MEc LINE L1 3721 3916 -2299 13504 163 18 15 chr2 193946840 193949236 -59307347 - Tigger1 DNA MER2_type -16 2402 2 3721 266 29 11 chr2 193949239 193950464 -59306119 + L1MEc LINE L1 3919 5165 -1050 3416 194 28 1 chr2 193950472 193951151 -59305432 - L1MC1 LINE L1 -5 6328 5632 294 95 0 0 chr2 193951176 193951218 -59305365 + (CA)n Simple_repeat Simple_repeat 1 42 0 648 243 55 11 chr2 193951232 193951504 -59305079 + L1M4 LINE L1 4354 4637 -1509 26 50 0 0 chr2 193952491 193952531 -59304052 + AT_rich Low_complexity Low_complexity 1 40 0 2249 199 244 99 chr2 193954137 193955213 -59301370 + MER52A LTR ERV1 1 1231 -524 277 265 65 30 chr2 193955356 193955535 -59301048 + MER52A LTR ERV1 544 716 -304 * 1885 204 49 84 chr2 193955511 193956044 -59300539 + MER52A LTR ERV1 1207 1720 -35 25 0 0 0 chr2 193956243 193956268 -59300315 + AT_rich Low_complexity Low_complexity 1 25 0 654 163 32 8 chr2 193956277 193956400 -59300183 - FLAM_C SINE Alu -7 126 1 1596 181 20 0 chr2 193956563 193956861 -59299722 + AluJo SINE Alu 1 304 -8 24 32 0 0 chr2 193957244 193957275 -59299308 + AT_rich Low_complexity Low_complexity 1 31 0 183 100 0 0 chr2 193958206 193958236 -59298347 + (CA)n Simple_repeat Simple_repeat 1 30 0 212 175 53 0 chr2 193958711 193958768 -59297815 + (CAAA)n Simple_repeat Simple_repeat 1 60 0 1324 225 78 10 chr2 193959173 193959559 -59297024 + MER92A LTR ERV1 1 412 0 21 0 0 0 chr2 193960053 193960074 -59296509 + AT_rich Low_complexity Low_complexity 1 21 0 317 308 74 69 chr2 193960114 193960478 -59296105 - MLT1L LTR MaLR 0 615 250 763 333 96 58 chr2 193961771 193962001 -59294582 + L2 LINE L2 1982 2202 -1112 312 27 0 0 chr2 193962001 193962038 -59294545 + (TG)n Simple_repeat Simple_repeat 2 38 0 763 333 96 58 chr2 193962038 193962727 -59293856 + L2 LINE L2 2202 2936 -378 29 0 0 0 chr2 193962825 193962854 -59293729 + AT_rich Low_complexity Low_complexity 1 29 0 26 30 0 0 chr2 193962882 193962915 -59293668 + AT_rich Low_complexity Low_complexity 1 33 0 195 397 0 0 chr2 193962924 193962987 -59293596 + L2 LINE L2 3156 3218 -54 468 0 0 0 chr2 193963266 193963318 -59293265 + (TA)n Simple_repeat Simple_repeat 2 53 0 300 91 0 0 chr2 193963892 193963936 -59292647 + (TG)n Simple_repeat Simple_repeat 2 45 0 234 322 40 40 chr2 193964125 193964277 -59292306 - L2 LINE L2 -55 3258 3107 2852 133 0 41 chr2 193964289 193964716 -59291867 + MER1A DNA MER1_type 84 493 -2209 2181 98 0 0 chr2 193964716 193965025 -59291558 + AluSc SINE Alu 2 310 0 2852 133 0 41 chr2 193965025 193965061 -59291522 + MER1A DNA MER1_type 493 529 0 180 335 36 54 chr2 193965111 193965278 -59291305 - L2 LINE L2 -449 2865 2702 1377 195 69 31 chr2 193965284 193965633 -59290950 + THE1B LTR MaLR 1 362 -2 3786 143 16 50 chr2 193965637 193966322 -59290261 + THE1B-int LTR MaLR 3 664 -916 4101 152 10 10 chr2 193966352 193967042 -59289541 + THE1B-int LTR MaLR 891 1580 0 914 191 191 50 chr2 193967042 193967361 -59289222 + THE1B LTR MaLR 1 364 0 21 0 0 0 chr2 193968365 193968386 -59288197 + AT_rich Low_complexity Low_complexity 1 21 0 31 0 0 0 chr2 193968555 193968586 -59287997 + AT_rich Low_complexity Low_complexity 1 31 0 26 50 0 0 chr2 193969206 193969246 -59287337 + AT_rich Low_complexity Low_complexity 1 40 0 40 49 0 0 chr2 193969416 193969477 -59287106 + AT_rich Low_complexity Low_complexity 1 61 0 621 273 47 32 chr2 193969660 193969938 -59286645 - L1MEc LINE L1 -2249 3966 3685 1234 272 83 51 chr2 193969939 193970654 -59285929 - L1MEc LINE L1 -2686 3529 2838 1864 105 12 0 chr2 193970654 193970911 -59285672 + AluSg SINE Alu 24 283 -27 254 29 29 0 chr2 193970911 193970946 -59285637 + (TA)n Simple_repeat Simple_repeat 2 37 0 1234 272 83 51 chr2 193970946 193971000 -59285583 - L1MEc LINE L1 -3377 2838 2787 2428 46 3 13 chr2 193971000 193971302 -59285281 - AluY SINE Alu -9 302 4 1234 272 83 51 chr2 193971302 193971673 -59284910 - L1MEc LINE L1 -3428 2787 2150 29 70 0 0 chr2 193971683 193971740 -59284843 + AT_rich Low_complexity Low_complexity 1 57 0 183 120 40 20 chr2 193971752 193971802 -59284781 + (TA)n Simple_repeat Simple_repeat 2 52 0 1831 148 0 20 chr2 193972090 193972394 -59284189 - AluSx SINE Alu -14 298 1 25 0 0 0 chr2 193972466 193972491 -59284092 + AT_rich Low_complexity Low_complexity 1 25 0 21 71 0 0 chr2 193972885 193972927 -59283656 + AT_rich Low_complexity Low_complexity 1 42 0 2043 121 0 7 chr2 193973798 193974095 -59282488 - AluSg SINE Alu -15 295 1 488 275 63 118 chr2 193974592 193975213 -59281370 - L1MEc LINE L1 -4960 1245 659 7181 215 16 1 chr2 193975241 193976575 -59280008 - L1PA15-16 LINE L1 -5495 1354 1 508 229 25 55 chr2 193976595 193976754 -59279829 - L1M4 LINE L1 -963 5994 5841 2328 81 7 0 chr2 193976754 193977052 -59279531 - AluSx SINE Alu -11 301 2 508 229 25 55 chr2 193977052 193977093 -59279490 - L1M4 LINE L1 -1116 5841 5800 1770 228 110 50 chr2 193977125 193977806 -59278777 - MER50 LTR ERV1 0 734 13 269 270 11 16 chr2 193977818 193977910 -59278673 - L1M4 LINE L1 -1183 5774 5686 845 295 78 48 chr2 193977915 193978315 -59278268 - L1M4 LINE L1 -6419 440 29 308 298 94 48 chr2 193978360 193978773 -59277810 + L1ME LINE L1 4612 5043 -1103 740 275 32 7 chr2 193978850 193979281 -59277302 + L1ME LINE L1 5195 5637 -533 389 333 0 0 chr2 193979369 193979477 -59277106 + MER63A DNA MER1_type 84 191 -19 25 0 0 0 chr2 193979794 193979819 -59276764 + AT_rich Low_complexity Low_complexity 1 25 0 33 43 0 0 chr2 193980106 193980153 -59276430 + AT_rich Low_complexity Low_complexity 1 47 0 22 0 0 0 chr2 193980491 193980513 -59276070 + AT_rich Low_complexity Low_complexity 1 22 0 24 96 0 0 chr2 193981061 193981134 -59275449 + AT_rich Low_complexity Low_complexity 1 73 0 1696 113 12 8 chr2 193981980 193982284 -59274299 - L1PA8A LINE L1 -608 5523 5219 3554 89 34 4 chr2 193982284 193982821 -59273762 + L1PA8 LINE L1 5617 6169 -3 21 95 0 0 chr2 193982993 193983056 -59273527 + AT_rich Low_complexity Low_complexity 1 63 0 35 41 0 0 chr2 193983292 193983341 -59273242 + AT_rich Low_complexity Low_complexity 1 49 0 34 79 0 0 chr2 193983427 193983503 -59273080 + AT_rich Low_complexity Low_complexity 1 76 0 234 117 50 83 chr2 193984510 193984570 -59272013 - L1MC4 LINE L1 -1339 6703 6646 352 100 129 0 chr2 193984599 193984669 -59271914 - HSMAR2 DNA Mariner -1 1301 1223 7470 137 27 9 chr2 193984701 193985968 -59270615 - HSMAR2 DNA Mariner -12 1290 1 2682 19 0 16 chr2 193986357 193986673 -59269910 - AluY SINE Alu 0 311 1 28 0 0 0 chr2 193987605 193987633 -59268950 + AT_rich Low_complexity Low_complexity 1 28 0 4195 199 39 14 chr2 194038584 194039462 -59217121 + L1MA3 LINE L1 2184 3038 -4527 3416 102 16 10 chr2 194039462 194039970 -59216613 - MER9 LTR ERVK 0 511 1 4195 199 39 14 chr2 194039970 194040147 -59216436 + L1MA3 LINE L1 3038 3270 -4295 1020 46 0 0 chr2 194040147 194040278 -59216305 - L1PA5 LINE L1 -1 6153 6023 4195 199 39 14 chr2 194040278 194040313 -59216270 + L1MA3 LINE L1 3270 3303 -4262 * 25353 38 15 0 chr2 194040300 194046321 -59210262 - L1PA2 LINE L1 -2 6153 1 11333 59 9 3 chr2 194046321 194047172 -59209411 - L1PA6 LINE L1 -118 6036 5192 227 0 68 23 chr2 194047172 194047216 -59209367 + (TTTTG)n Simple_repeat Simple_repeat 1 46 0 11333 59 9 3 chr2 194047216 194048477 -59208106 - L1PA6 LINE L1 -962 5192 3907 1102 189 59 46 chr2 194048475 194048782 -59207801 + L1MA3 LINE L1 3257 3567 -3998 * 546 183 0 8 chr2 194048782 194048902 -59207681 + L1PA6 LINE L1 6036 6154 0 926 219 43 0 chr2 194048934 194049167 -59207416 + L1MA3 LINE L1 3652 3894 -3671 2621 230 40 12 chr2 194049190 194049987 -59206596 + L1MA3 LINE L1 4077 4895 -2670 4969 171 52 23 chr2 194049988 194050615 -59205968 + L1MA3 LINE L1 6169 6777 -947 2534 119 8 3 chr2 194050615 194050976 -59205607 + THE1B LTR MaLR 2 364 0 4969 171 52 23 chr2 194050976 194052730 -59203853 + L1MA3 LINE L1 6777 7661 -63 3769 113 10 91 chr2 194052758 194053481 -59203102 - MER4A LTR ERV1 0 664 1 540 204 46 0 chr2 194053561 194053669 -59202914 - MER44D DNA MER2_type 0 605 493 1880 135 6 22 chr2 194053669 194054018 -59202565 - MER4A LTR ERV1 0 664 263 606 141 0 10 chr2 194054018 194054117 -59202466 - MER4A LTR ERV1 -566 98 1 * 819 169 142 62 chr2 194054117 194054330 -59202253 - MER44D DNA MER2_type -107 502 2 2720 158 22 7 chr2 194055080 194055537 -59201046 - Tigger7 DNA MER2_type 0 2587 2124 443 174 116 0 chr2 194055533 194055619 -59200964 - Tigger7 DNA MER2_type -637 96 1 * 745 113 30 0 chr2 194055725 194055858 -59200725 - L1MA4 LINE L1 -6 6294 6158 21 0 0 0 chr2 194056099 194056120 -59200463 + AT_rich Low_complexity Low_complexity 1 21 0 1753 148 55 30 chr2 194056223 194056589 -59199994 - THE1C LTR MaLR 0 375 1 300 53 0 0 chr2 194057056 194057094 -59199489 + (TGG)n Simple_repeat Simple_repeat 1 38 0 1605 162 51 39 chr2 194057147 194057480 -59199103 + MER1B DNA MER1_type 1 337 0 1376 122 17 17 chr2 194058009 194058247 -59198336 + L1MA3 LINE L1 6068 6305 0 27 62 0 0 chr2 194058247 194058295 -59198288 + AT_rich Low_complexity Low_complexity 1 48 0 245 358 35 23 chr2 194058809 194058982 -59197601 - L2 LINE L2 -533 2781 2607 187 350 31 21 chr2 194059044 194059141 -59197442 - L2 LINE L2 -820 2494 2397 644 152 0 0 chr2 194059230 194059335 -59197248 + MLT1A2 LTR MaLR 268 372 -2 2243 232 70 48 chr2 194059335 194060107 -59196476 + MLT1A2-int LTR MaLR 3 883 -488 2442 154 51 37 chr2 194060196 194060767 -59195816 + L1MA8 LINE L1 5708 6286 -5 518 248 60 8 chr2 194060873 194060990 -59195593 - MER58B DNA MER1_type 0 341 219 241 250 0 67 chr2 194060986 194061046 -59195537 - MER58B DNA MER1_type -285 56 1 * 27 29 0 0 chr2 194061274 194061308 -59195275 + AT_rich Low_complexity Low_complexity 1 34 0 1967 125 14 0 chr2 194061350 194061637 -59194946 + AluSp SINE Alu 1 291 -22 278 50 17 50 chr2 194061638 194061698 -59194885 + (TA)n Simple_repeat Simple_repeat 1 58 0 30 0 0 61 chr2 194061752 194061801 -59194782 + AT_rich Low_complexity Low_complexity 1 46 0 25 0 0 0 chr2 194061923 194061948 -59194635 + AT_rich Low_complexity Low_complexity 1 25 0 338 283 130 22 chr2 194062139 194062323 -59194260 + HAL1 LINE L1 1566 1769 -738 21 36 0 0 chr2 194064184 194064212 -59192371 + AT_rich Low_complexity Low_complexity 1 28 0 32 0 0 0 chr2 194064227 194064259 -59192324 + AT_rich Low_complexity Low_complexity 1 32 0 23 65 0 16 chr2 194066308 194066348 -59190235 + AT_rich Low_complexity Low_complexity 1 41 -20 1897 107 32 11 chr2 194066348 194066500 -59190083 - AluSq SINE Alu -27 286 124 221 57 29 0 chr2 194066500 194066535 -59190048 + (TTTG)n Simple_repeat Simple_repeat 4 39 0 1897 107 32 11 chr2 194066535 194066662 -59189921 - AluSq SINE Alu -189 124 1 23 65 0 16 chr2 194066662 194066683 -59189900 + AT_rich Low_complexity Low_complexity 41 61 0 311 113 57 0 chr2 194066684 194066737 -59189846 + L1 LINE L1 3352 3407 -2739 2017 24 0 28 chr2 194066846 194067099 -59189484 + L1PA2 LINE L1 5910 6155 0 318 234 126 9 chr2 194067105 194067216 -59189367 - L1ME4a LINE L1 -4 6117 5994 1895 199 11 3 chr2 194067225 194067606 -59188977 - L1MB1 LINE L1 -1 7605 7222 528 172 14 90 chr2 194067629 194067690 -59188893 + MLT2B2 LTR ERVL 371 435 -80 2169 158 28 17 chr2 194067690 194068050 -59188533 - THE1B LTR MaLR 0 364 1 528 172 14 90 chr2 194068050 194068101 -59188482 + MLT2B2 LTR ERVL 435 472 -43 791 26 35 0 chr2 194068101 194068215 -59188368 + (TCTA)n Simple_repeat Simple_repeat 4 121 0 528 172 14 90 chr2 194068215 194068246 -59188337 + MLT2B2 LTR ERVL 472 504 -11 8350 246 76 22 chr2 194068260 194070404 -59186179 - L1MB1 LINE L1 -556 7050 5023 228 35 0 0 chr2 194070404 194070433 -59186150 + (TC)n Simple_repeat Simple_repeat 2 30 0 8350 246 76 22 chr2 194070433 194070832 -59185751 - L1MB1 LINE L1 -2583 5023 4647 2277 95 0 3 chr2 194070832 194071136 -59185447 - AluY SINE Alu -6 305 3 8350 246 76 22 chr2 194071136 194073189 -59183394 - L1MB1 LINE L1 -2959 4647 2182 1499 272 60 2 chr2 194073487 194073884 -59182699 + MLT1D LTR MaLR 86 505 0 926 316 62 50 chr2 194074177 194074654 -59181929 + L2 LINE L2 2432 2924 -389 2851 170 10 2 chr2 194074654 194075147 -59181436 + LOR1a LTR ERV1 1 497 0 926 316 62 50 chr2 194075147 194075542 -59181041 + L2 LINE L2 2924 3313 0 22 0 0 0 chr2 194077301 194077323 -59179260 + AT_rich Low_complexity Low_complexity 1 22 0 320 339 86 27 chr2 194077624 194077810 -59178773 + L1MDb LINE L1 5 201 -6208 22 35 0 0 chr2 194077938 194077967 -59178616 + AT_rich Low_complexity Low_complexity 1 29 0 432 273 66 41 chr2 194077986 194078262 -59178321 + L1ME LINE L1 5190 5466 -704 213 246 88 0 chr2 194079581 194079638 -59176945 - L2 LINE L2 -1 3312 3251 21 0 0 0 chr2 194079655 194079676 -59176907 + AT_rich Low_complexity Low_complexity 1 21 0 482 322 87 51 chr2 194079832 194080571 -59176012 + L1MDb LINE L1 294 1058 -5338 261 130 0 102 chr2 194080718 194080793 -59175790 + (T)n Simple_repeat Simple_repeat 1 63 -34 7687 21 2 0 chr2 194080793 194082093 -59174490 - L1PA3 LINE L1 -1 6154 4854 261 130 0 102 chr2 194082093 194082125 -59174458 + (T)n Simple_repeat Simple_repeat 63 97 0 1883 182 16 56 chr2 194082598 194083048 -59173535 + MSTB1 LTR MaLR 1 432 0 33 43 0 0 chr2 194083082 194083129 -59173454 + AT_rich Low_complexity Low_complexity 1 47 0 2206 135 6 0 chr2 194083263 194083604 -59172979 - MER61A LTR ERV1 0 343 1 3646 85 68 9 chr2 194083604 194084159 -59172424 - MER61A-int LTR ERV1 -1 5216 4629 * 4114 78 57 16 chr2 194084158 194084738 -59171845 + MER61-int LTR ERV1 3267 3870 -1347 905 159 16 55 chr2 194084726 194084908 -59171675 - MER61A-int LTR ERV1 -5042 175 1 * 2226 139 18 0 chr2 194084908 194085245 -59171338 - MER61A LTR ERV1 0 343 1 22 56 0 0 chr2 194085529 194085565 -59171018 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr2 194085681 194085709 -59170874 + AT_rich Low_complexity Low_complexity 1 28 0 2308 80 6 13 chr2 194086340 194086651 -59169932 + AluY SINE Alu 1 309 -2 430 83 28 0 chr2 194086830 194086902 -59169681 + (TA)n Simple_repeat Simple_repeat 1 74 0 2141 104 3 3 chr2 194087125 194087423 -59169160 + AluSp SINE Alu 1 298 -15 21 0 0 0 chr2 194087895 194087916 -59168667 + AT_rich Low_complexity Low_complexity 1 21 0 32 57 0 0 chr2 194088625 194088678 -59167905 + AT_rich Low_complexity Low_complexity 1 53 0 182 156 22 0 chr2 194090210 194090255 -59166328 + GA-rich Low_complexity Low_complexity 4 49 0 332 311 39 10 chr2 194091148 194091251 -59165332 - L2 LINE L2 0 3313 3208 334 331 134 0 chr2 194091371 194091513 -59165070 - MIR SINE MIR -83 179 19 236 360 151 32 chr2 194093575 194093761 -59162822 - MIR SINE MIR -53 209 2 1291 181 15 30 chr2 194094527 194094798 -59161785 + AluJo SINE Alu 44 310 -2 193 303 46 59 chr2 194095069 194095221 -59161362 - L2 LINE L2 -1293 2021 1872 1961 134 0 0 chr2 194095364 194095675 -59160908 - AluSx SINE Alu 0 311 1 498 33 0 0 chr2 194096036 194096096 -59160487 + (TA)n Simple_repeat Simple_repeat 1 60 0 367 97 0 28 chr2 194096233 194096305 -59160278 + (TA)n Simple_repeat Simple_repeat 2 71 0 1380 229 65 16 chr2 194096604 194096976 -59159607 - MLT1B LTR MaLR 0 390 1 21 36 0 0 chr2 194097688 194097716 -59158867 + AT_rich Low_complexity Low_complexity 1 28 0 843 254 31 58 chr2 194098656 194099028 -59157555 + MER92B LTR ERV1 45 408 -4 296 304 60 65 chr2 194099211 194099428 -59157155 - MIR SINE MIR 0 262 47 884 329 20 65 chr2 194100665 194101154 -59155429 - L2 LINE L2 0 3313 2847 2113 114 3 7 chr2 194101338 194101635 -59154948 + AluSg SINE Alu 1 296 -14 947 190 173 24 chr2 194102327 194102616 -59153967 - MSTC LTR MaLR -96 332 1 183 42 0 0 chr2 194102991 194103015 -59153568 + (TAAAAA)n Simple_repeat Simple_repeat 2 25 0 416 290 16 8 chr2 194103204 194103328 -59153255 + MLT1J LTR MaLR 51 175 -336 1163 221 70 45 chr2 194104121 194104451 -59152132 + MLT1A2 LTR MaLR 37 374 0 230 0 33 0 chr2 194104865 194104895 -59151688 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 30 27 0 0 chr2 194105208 194105245 -59151338 + AT_rich Low_complexity Low_complexity 1 37 0 595 308 109 47 chr2 194105357 194105825 -59150758 + L1ME LINE L1 1078 1596 -4786 1737 190 44 0 chr2 194105830 194106151 -59150432 + MER2 DNA MER2_type 1 335 -10 517 295 67 15 chr2 194106231 194106499 -59150084 + L1ME LINE L1 1710 1991 -4572 341 320 123 15 chr2 194106529 194106863 -59149720 + L1ME LINE L1 2064 2433 -4130 1346 258 100 54 chr2 194106889 194107481 -59149102 - LTR68 LTR ERV1 0 740 122 277 316 43 26 chr2 194107494 194107728 -59148855 + L1ME LINE L1 2440 2677 -3705 1822 141 0 20 chr2 194107824 194108123 -59148460 - MER4A LTR ERV1 0 664 372 560 146 21 10 chr2 194108175 194108271 -59148312 - MER4A LTR ERV1 -567 97 1 2173 270 135 22 chr2 194108340 194109892 -59146691 + L1ME LINE L1 2912 4639 -1743 29 0 0 0 chr2 194110309 194110338 -59146245 + AT_rich Low_complexity Low_complexity 1 29 0 278 259 121 0 chr2 194110365 194110481 -59146102 + L1ME LINE L1 5554 5683 -723 51 17 0 0 chr2 194110809 194110867 -59145716 + AT_rich Low_complexity Low_complexity 1 58 0 405 356 0 97 chr2 194111265 194111512 -59145071 - HAL1 LINE L1 -590 1917 1695 226 339 108 8 chr2 194111550 194111680 -59144903 - MLT1J2 LTR MaLR -59 391 249 342 304 33 11 chr2 194111896 194112080 -59144503 - HAL1 LINE L1 -846 1661 1474 3385 206 66 51 chr2 194112570 194113893 -59142690 - L1MB5 LINE L1 0 6174 4852 2274 184 107 6 chr2 194113897 194114439 -59142144 + L1MA10 LINE L1 5734 6330 -4 23 54 0 0 chr2 194114885 194114922 -59141661 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr2 194115009 194115037 -59141546 + AT_rich Low_complexity Low_complexity 1 28 0 513 314 88 18 chr2 194115055 194115281 -59141302 - MIR SINE MIR -8 254 13 206 0 69 0 chr2 194115530 194115559 -59141024 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 21 0 0 0 chr2 194115743 194115764 -59140819 + AT_rich Low_complexity Low_complexity 1 21 0 661 185 22 15 chr2 194116185 194116320 -59140263 + U8 snRNA snRNA 1 136 0 2353 218 29 48 chr2 194116817 194116858 -59139725 - MLT2B3 LTR ERVL -14 540 500 888 162 67 67 chr2 194116858 194117068 -59139515 + MER6B DNA MER2_type 1 210 0 2353 218 29 48 chr2 194117068 194117576 -59139007 - MLT2B3 LTR ERVL -54 500 1 2129 134 0 3 chr2 194117751 194118056 -59138527 - AluSx SINE Alu -8 304 1 21 0 0 0 chr2 194118787 194118808 -59137775 + AT_rich Low_complexity Low_complexity 1 21 0 717 283 34 30 chr2 194118866 194119131 -59137452 + MER90 LTR ERV1 144 409 -205 2015 212 16 49 chr2 194119503 194119727 -59136856 + MLT2B2 LTR ERVL 1 204 -311 2887 164 6 10 chr2 194119727 194120215 -59136368 + MER66B LTR ERV1 1 486 0 2015 212 16 49 chr2 194120215 194120443 -59136140 + MLT2B2 LTR ERVL 204 438 -77 16660 144 34 26 chr2 194120444 194120708 -59135875 - Tigger3(Golem) DNA MER2_type 0 3029 2768 2428 36 0 33 chr2 194120708 194121013 -59135570 + AluY SINE Alu 1 295 -16 16660 144 34 26 chr2 194121013 194123754 -59132829 - Tigger3(Golem) DNA MER2_type -261 2768 1 24 77 0 0 chr2 194124461 194124513 -59132070 + AT_rich Low_complexity Low_complexity 1 52 0 3189 247 86 23 chr2 194124685 194124764 -59131819 - Charlie1 DNA MER1_type -3 2758 2685 1015 72 29 0 chr2 194124764 194124903 -59131680 + L1PA13 LINE L1 6016 6158 -5 3189 247 86 23 chr2 194124903 194125992 -59130591 - Charlie1 DNA MER1_type -76 2685 1516 205 200 0 0 chr2 194126818 194126858 -59129725 + A-rich Low_complexity Low_complexity 2 41 0 180 0 0 0 chr2 194127058 194127078 -59129505 + (TA)n Simple_repeat Simple_repeat 1 20 0 * 294 29 0 0 chr2 194127077 194127112 -59129471 + (GA)n Simple_repeat Simple_repeat 2 36 0 22 0 0 0 chr2 194128284 194128306 -59128277 + AT_rich Low_complexity Low_complexity 1 22 0 1840 146 18 32 chr2 194129348 194129691 -59126892 + MER44D DNA MER2_type 1 608 -1 325 322 28 51 chr2 194130389 194130603 -59125980 - MER90 LTR ERV1 -20 594 386 384 333 18 6 chr2 194131044 194131209 -59125374 - ERVL LTR ERVL -1281 4483 4317 * 10477 107 159 107 chr2 194131207 194133390 -59123193 - MER4A-int LTR ERV1 -3169 3429 943 333 109 0 0 chr2 194133390 194133445 -59123138 + (CA)n Simple_repeat Simple_repeat 2 56 0 10477 107 159 107 chr2 194133445 194134438 -59122145 - MER4A-int LTR ERV1 -5655 943 3 1689 151 23 22 chr2 194134443 194134788 -59121795 - MER4A LTR ERV1 0 664 261 621 135 0 0 chr2 194134788 194134884 -59121699 - MER4A LTR ERV1 -566 98 3 22 35 0 0 chr2 194135009 194135038 -59121545 + AT_rich Low_complexity Low_complexity 1 29 0 733 311 127 30 chr2 194135776 194136242 -59120341 + L2 LINE L2 2238 2748 -566 562 317 37 76 chr2 194136302 194136760 -59119823 + L2 LINE L2 2862 3301 -12 35016 104 12 11 chr2 194136781 194142895 -59113688 - L1PA6 LINE L1 0 6154 43 22 35 0 0 chr2 194143199 194143228 -59113355 + AT_rich Low_complexity Low_complexity 1 29 0 740 267 141 9 chr2 194143546 194143822 -59112761 + MLT1E1 LTR MaLR 319 654 0 1143 258 110 123 chr2 194143823 194145201 -59111382 + MLT1E1-int LTR MaLR 2 1361 -10 21 36 0 0 chr2 194145321 194145349 -59111234 + AT_rich Low_complexity Low_complexity 1 28 0 230 265 44 0 chr2 194145455 194145523 -59111060 - L1M4 LINE L1 -3584 2562 2492 22 0 0 0 chr2 194146483 194146505 -59110078 + AT_rich Low_complexity Low_complexity 1 22 0 2198 245 50 64 chr2 194146988 194147594 -59108989 + MLT1E1 LTR MaLR 11 609 -45 1587 209 69 33 chr2 194147594 194148044 -59108539 + MLT1C LTR MaLR 1 466 -1 2198 245 50 64 chr2 194148044 194148090 -59108493 + MLT1E1 LTR MaLR 609 654 0 1880 118 42 14 chr2 194148391 194148680 -59107903 - AluY SINE Alu -4 307 11 36 62 0 0 chr2 194149726 194149790 -59106793 + AT_rich Low_complexity Low_complexity 1 64 0 259 294 36 10 chr2 194150000 194150154 -59106429 - L1M4 LINE L1 -536 5648 5488 361 279 55 103 chr2 194150158 194150488 -59106095 + HERVL40 LTR ERVL 2036 2349 -688 405 267 0 0 chr2 194150851 194150941 -59105642 + HERVL40 LTR ERVL 5437 5526 -4 696 203 8 0 chr2 194150945 194151073 -59105510 + LTR40a LTR ERVL 1 129 -390 528 51 13 39 chr2 194151079 194151141 -59105442 + MLT2B2 LTR ERVL 6 67 -448 1037 261 8 4 chr2 194151141 194151379 -59105204 - MER8 DNA MER2_type 0 239 1 528 51 13 39 chr2 194151379 194151394 -59105189 + MLT2B2 LTR ERVL 67 81 -434 13569 186 39 22 chr2 194151394 194154049 -59102534 + HERVL40-B1 LTR ERVL 3058 5757 -7 1847 207 44 35 chr2 194154049 194154471 -59102112 + MLT2B1 LTR ERVL 1 374 -40 284 127 18 0 chr2 194154471 194154526 -59102057 + (TA)n Simple_repeat Simple_repeat 2 57 0 318 127 73 0 chr2 194154566 194154621 -59101962 + MLT2B1 LTR ERVL 462 520 0 * 976 302 60 14 chr2 194154621 194154969 -59101614 + LTR40a LTR ERVL 128 492 -27 22 56 0 0 chr2 194155237 194155273 -59101310 + AT_rich Low_complexity Low_complexity 1 36 0 2702 166 7 7 chr2 194155328 194155787 -59100796 + MER65C LTR ERV1 3 461 0 1180 97 0 0 chr2 194156455 194156610 -59099973 + AluSg/x SINE Alu 145 299 -13 21 71 0 0 chr2 194157821 194157863 -59098720 + AT_rich Low_complexity Low_complexity 1 42 0 675 289 92 46 chr2 194157894 194158675 -59097908 - HAL1b LINE L1 -91 1257 441 4773 196 51 7 chr2 194158965 194160847 -59095736 - L1PA16 LINE L1 0 6166 4162 * 6368 250 22 8 chr2 194160841 194162630 -59093953 + L1PA16 LINE L1 2358 4172 -1974 2252 57 0 4 chr2 194163118 194163430 -59093153 - AluY SINE Alu 0 313 3 265 401 23 15 chr2 194164555 194164687 -59091896 - MIR3 SINE MIR -73 135 3 22 70 0 0 chr2 194164773 194164816 -59091767 + AT_rich Low_complexity Low_complexity 1 43 0 513 27 40 27 chr2 194164911 194164986 -59091597 - L1PA6 LINE L1 0 6154 6079 30 69 0 0 chr2 194165007 194165065 -59091518 + AT_rich Low_complexity Low_complexity 1 58 0 310 272 88 92 chr2 194165067 194165339 -59091244 - HAL1 LINE L1 -1426 1081 811 27 29 0 0 chr2 194166043 194166077 -59090506 + AT_rich Low_complexity Low_complexity 1 34 0 664 36 0 0 chr2 194167193 194167276 -59089307 - L1PA6 LINE L1 -7 6147 6065 2518 20 0 0 chr2 194167276 194167569 -59089014 + L1PA5 LINE L1 5770 6062 -92 4290 168 16 26 chr2 194168121 194168756 -59087827 - L1PA16 LINE L1 -175 5991 5351 1892 154 30 0 chr2 194168756 194169055 -59087528 - AluSx SINE Alu -4 308 1 4290 168 16 26 chr2 194169055 194169764 -59086819 - L1PA16 LINE L1 -815 5351 4643 * 4716 285 22 28 chr2 194169761 194171597 -59084986 - L1PA16 LINE L1 -2677 3469 1645 2201 245 47 28 chr2 194172587 194173327 -59083256 - L1ME2 LINE L1 -16 6148 5395 365 250 65 11 chr2 194173328 194173420 -59083163 - L1ME LINE L1 -5617 453 357 28 48 0 0 chr2 194173884 194173926 -59082657 + AT_rich Low_complexity Low_complexity 1 42 0 25 65 0 0 chr2 194174236 194174282 -59082301 + AT_rich Low_complexity Low_complexity 1 46 0 189 74 0 0 chr2 194175197 194175224 -59081359 + (TTA)n Simple_repeat Simple_repeat 2 28 0 626 184 0 0 chr2 194175232 194175341 -59081242 - FLAM_A SINE Alu -33 109 1 4079 153 19 4 chr2 194175425 194176119 -59080464 + Tigger3b DNA MER2_type 2 705 -526 247 175 105 0 chr2 194176124 194176181 -59080402 - L1 LINE L1 -3779 2367 2305 25 0 0 0 chr2 194176402 194176427 -59080156 + AT_rich Low_complexity Low_complexity 1 25 0 1803 266 22 4 chr2 194176459 194176922 -59079661 + ERVL LTR ERVL 1383 1853 -3911 4062 129 62 1 chr2 194176962 194177297 -59079286 - L1PB3 LINE L1 0 6154 5841 249 43 64 0 chr2 194177297 194177344 -59079239 + (TA)n Simple_repeat Simple_repeat 2 51 0 4062 129 62 1 chr2 194177344 194177703 -59078880 - L1PB3 LINE L1 -313 5841 5418 352 353 49 8 chr2 194178324 194178568 -59078015 + L1M4 LINE L1 2141 2394 -3752 290 404 20 13 chr2 194179189 194179340 -59077243 + MIR3 SINE MIR 42 193 -15 23 33 0 0 chr2 194179353 194179383 -59077200 + AT_rich Low_complexity Low_complexity 1 30 0 451 184 10 10 chr2 194179580 194179678 -59076905 + MER83 LTR ERV1 285 382 -66 649 261 98 36 chr2 194180547 194180823 -59075760 - MER68 LTR ERV1 0 562 270 1200 177 9 2 chr2 194180825 194181142 -59075441 - MLT1B LTR MaLR -2 388 1 1006 224 55 0 chr2 194181142 194181359 -59075224 - MER68 LTR ERV1 -288 274 46 2338 57 3 0 chr2 194181364 194181663 -59074920 - L1PA8 LINE L1 -2 6170 5871 1423 51 0 0 chr2 194181663 194181839 -59074744 + L1PA8 LINE L1 5682 5857 -315 27 0 0 0 chr2 194181951 194181978 -59074605 + AT_rich Low_complexity Low_complexity 1 27 0 1876 103 15 0 chr2 194182133 194182404 -59074179 + AluY SINE Alu 1 275 -36 186 71 0 0 chr2 194182408 194182436 -59074147 + (CAA)n Simple_repeat Simple_repeat 1 28 0 246 219 31 83 chr2 194182679 194182775 -59073808 + L1MC/D LINE L1 5540 5630 -491 268 269 102 27 chr2 194182776 194182962 -59073621 + L1MC/D LINE L1 5682 5881 -1927 285 353 35 0 chr2 194184384 194184500 -59072083 + MIR SINE MIR 70 189 -73 1602 274 74 31 chr2 194184543 194185097 -59071486 - MLT1E LTR MaLR -5 588 11 204 304 18 0 chr2 194185634 194185690 -59070893 - MIR SINE MIR -201 61 5 213 39 0 0 chr2 194185814 194185840 -59070743 + (TG)n Simple_repeat Simple_repeat 1 26 0 1699 223 71 16 chr2 194186446 194186881 -59069702 + MLT1C LTR MaLR 9 467 0 26 0 0 0 chr2 194187331 194187357 -59069226 + AT_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr2 194187433 194187456 -59069127 + AT_rich Low_complexity Low_complexity 1 23 0 1175 201 82 14 chr2 194187807 194188086 -59068497 + MLT2D LTR ERVL 1 298 -116 259 160 0 40 chr2 194188152 194188202 -59068381 + MLT2D LTR ERVL 417 464 0 244 261 15 15 chr2 194188342 194188407 -59068176 - LTR67 LTR ERVL 0 557 493 1243 319 93 8 chr2 194188778 194189404 -59067179 + L1MEc LINE L1 36 714 -5682 459 234 21 48 chr2 194189428 194189573 -59067010 + MLT1G LTR MaLR 415 555 -35 226 179 0 0 chr2 194190093 194190132 -59066451 + MLT1F LTR MaLR 332 370 -185 284 204 45 34 chr2 194190168 194190256 -59066327 + MLT1F LTR MaLR 452 540 -2 684 332 52 34 chr2 194190776 194191104 -59065479 - L2 LINE L2 -12 3260 2927 1370 227 107 46 chr2 194191227 194191703 -59064880 + MLT1D LTR MaLR 1 505 0 295 348 107 61 chr2 194191821 194191867 -59064716 - L2 LINE L2 -655 2659 2617 180 0 0 0 chr2 194191867 194191887 -59064696 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 295 348 107 61 chr2 194191887 194192231 -59064352 - L2 LINE L2 -697 2617 2251 182 320 0 0 chr2 194192513 194192563 -59064020 - L2 LINE L2 -74 3198 3149 * 239 325 34 60 chr2 194192561 194192678 -59063905 + L2 LINE L2 3157 3270 -2 1377 214 128 9 chr2 194194984 194195325 -59061258 - MLT1A1 LTR MaLR 0 365 1 1393 166 21 0 chr2 194198258 194198499 -59058084 - AluJo SINE Alu -23 289 44 53 57 0 0 chr2 194198620 194198708 -59057875 + AT_rich Low_complexity Low_complexity 1 88 0 272 48 24 0 chr2 194199376 194199418 -59057165 + (TG)n Simple_repeat Simple_repeat 1 43 0 25 0 0 0 chr2 194199753 194199778 -59056805 + AT_rich Low_complexity Low_complexity 1 25 0 21 57 0 0 chr2 194202316 194202351 -59054232 + AT_rich Low_complexity Low_complexity 1 35 0 247 211 0 0 chr2 194202668 194202720 -59053863 + T-rich Low_complexity Low_complexity 1 52 0 874 157 0 0 chr2 194202720 194202854 -59053729 - AluJo SINE Alu -178 134 1 291 151 38 0 chr2 194202944 194202997 -59053586 + Alu SINE Alu 243 297 -5 4984 260 98 38 chr2 194203378 194205874 -59050709 - L1MEc LINE L1 -1267 4948 2213 342 0 0 0 chr2 194205874 194205912 -59050671 + (TG)n Simple_repeat Simple_repeat 1 38 0 4984 260 98 38 chr2 194205912 194206989 -59049594 - L1MEc LINE L1 -4002 2213 1202 1616 274 38 20 chr2 194207154 194207713 -59048870 - L1MEc LINE L1 -5473 923 355 249 273 13 0 chr2 194208595 194208672 -59047911 + GA-rich Low_complexity Low_complexity 4 81 0 499 282 34 21 chr2 194209153 194209318 -59047265 + MIR SINE MIR 2 168 -40 21 36 0 0 chr2 194210904 194210932 -59045651 + AT_rich Low_complexity Low_complexity 1 28 0 1107 219 57 95 chr2 194212244 194212681 -59043902 - L1ME2 LINE L1 -52 6114 5715 1494 142 54 54 chr2 194212700 194213017 -59043566 - Tigger2 DNA MER2_type -10 2708 2392 366 171 0 122 chr2 194213020 194213143 -59043440 - L1MC5 LINE L1 -1072 6889 6782 903 263 21 10 chr2 194213148 194213437 -59043146 - L1ME2 LINE L1 -1265 4881 4590 899 256 89 34 chr2 194213439 194213821 -59042762 - L1ME2 LINE L1 -1977 4169 3767 265 191 55 9 chr2 194213824 194213934 -59042649 + (TA)n Simple_repeat Simple_repeat 2 116 0 * 324 162 34 56 chr2 194213896 194214075 -59042508 + (TTATA)n Simple_repeat Simple_repeat 5 179 0 923 283 43 2 chr2 194214097 194214493 -59042090 - L1ME2 LINE L1 -2399 3747 3336 1191 188 98 155 chr2 194214653 194215285 -59041298 + L1ME2 LINE L1 5492 6087 -77 509 267 67 0 chr2 194215214 194215364 -59041219 + L1MA10 LINE L1 6175 6334 0 * 205 315 0 0 chr2 194215752 194215806 -59040777 - MIR SINE MIR 0 262 209 200 247 11 45 chr2 194215806 194215895 -59040688 + A-rich Low_complexity Low_complexity 1 86 0 238 331 37 44 chr2 194216071 194216207 -59040376 - L2 LINE L2 -851 2463 2329 21 57 0 0 chr2 194216552 194216587 -59039996 + AT_rich Low_complexity Low_complexity 1 35 0 180 246 35 18 chr2 194217350 194217407 -59039176 - L2 LINE L2 -527 2787 2730 267 222 44 100 chr2 194218614 194218704 -59037879 + MER68 LTR ERV1 468 552 -10 371 372 39 53 chr2 194219018 194219303 -59037280 - L2 LINE L2 0 3272 2992 293 220 0 0 chr2 194219489 194219539 -59037044 + Tigger5 DNA MER2_type 1 50 -2273 480 224 10 0 chr2 194219541 194219639 -59036944 + Tigger5 DNA MER2_type 2223 2321 -2 604 137 43 43 chr2 194219648 194219765 -59036818 - L1MA9 LINE L1 -71 6241 6125 * 6620 23 0 0 chr2 194219762 194220540 -59036043 - L1PA2 LINE L1 -1199 4947 4170 7781 17 0 0 chr2 194220542 194221743 -59034840 + L1PA2 LINE L1 4954 6154 -1 22 0 0 0 chr2 194221743 194221765 -59034818 + AT_rich Low_complexity Low_complexity 1 22 0 2788 158 96 94 chr2 194221765 194222066 -59034517 - L1MA9 LINE L1 -173 6139 5840 243 61 0 0 chr2 194222066 194222099 -59034484 + (TCTG)n Simple_repeat Simple_repeat 4 36 0 2788 158 96 94 chr2 194222099 194222519 -59034064 - L1MA9 LINE L1 -472 5840 5417 1634 236 26 0 chr2 194222534 194222953 -59033630 - L1MA9 LINE L1 -844 5302 4873 5408 158 46 10 chr2 194223046 194224773 -59031810 - L1PA13 LINE L1 -11 6152 4366 1446 180 120 6 chr2 194224773 194225090 -59031493 - MSTB LTR MaLR -73 353 1 8561 195 5 9 chr2 194225090 194226748 -59029835 - MSTB-int LTR MaLR 0 1651 1 2026 143 96 26 chr2 194226758 194227142 -59029441 - MSTB LTR MaLR -15 411 1 1452 199 18 5 chr2 194227244 194227266 -59029317 - L1M2 LINE L1 -4253 2174 2154 1647 179 23 10 chr2 194227266 194227574 -59029009 - AluJb SINE Alu 0 312 1 1452 199 18 5 chr2 194227574 194227858 -59028725 - L1M2 LINE L1 -4273 2154 1691 369 277 96 16 chr2 194227867 194228116 -59028467 - L1MEc LINE L1 -5142 1254 986 253 287 57 8 chr2 194228130 194228252 -59028331 - L1MEc LINE L1 -5475 921 794 420 370 82 62 chr2 194228277 194228982 -59027601 - L1MEc LINE L1 -5635 761 43 7702 18 16 0 chr2 194228994 194229989 -59026594 - L1PA2 LINE L1 -1 6154 5156 1993 147 3 10 chr2 194230061 194230375 -59026208 - AluSx SINE Alu 0 312 1 1594 193 3 10 chr2 194230401 194230706 -59025877 + AluSx SINE Alu 2 304 -8 21 0 0 0 chr2 194230706 194230727 -59025856 + AT_rich Low_complexity Low_complexity 1 21 0 2086 96 38 3 chr2 194231145 194231436 -59025147 - AluSx SINE Alu -11 301 1 371 214 79 0 chr2 194231461 194231550 -59025033 - MER58B DNA MER1_type -52 289 194 434 296 45 45 chr2 194231728 194232083 -59024500 - L1MEc LINE L1 -1909 4735 4381 742 286 63 20 chr2 194232101 194232559 -59024024 - L1MEc LINE L1 -2330 4314 3837 612 306 54 5 chr2 194232583 194232805 -59023778 + MIR SINE MIR 2 234 -28 274 274 98 78 chr2 194232969 194233469 -59023114 - L1MEc LINE L1 -3316 3328 2819 331 311 81 46 chr2 194233498 194233781 -59022802 - L1MEc LINE L1 -4050 2775 2483 748 166 29 17 chr2 194233790 194233965 -59022618 - L1MA4 LINE L1 -6 6294 6118 371 269 60 75 chr2 194234102 194234370 -59022213 - L1MEc LINE L1 -4572 2253 1990 892 93 0 0 chr2 194234381 194234499 -59022084 + AluSg/x SINE Alu 177 294 -16 839 290 85 94 chr2 194234630 194235526 -59021057 - L1MEc LINE L1 -4915 1719 833 2146 161 0 16 chr2 194235526 194235898 -59020685 + MER47A DNA MER2_type 1 366 0 839 290 85 94 chr2 194235898 194236123 -59020460 - L1MEc LINE L1 -5801 833 608 2118 52 11 7 chr2 194236256 194236528 -59020055 - AluY SINE Alu -18 293 21 318 364 88 31 chr2 194236683 194237027 -59019556 - L2 LINE L2 -181 3091 2720 237 290 0 29 chr2 194238974 194239043 -59017540 - L2 LINE L2 -4 3268 3202 860 266 29 20 chr2 194239081 194239325 -59017258 - L1MEc LINE L1 -6289 253 8 24 32 0 0 chr2 194239975 194240006 -59016577 + AT_rich Low_complexity Low_complexity 1 31 0 206 123 27 41 chr2 194242341 194242414 -59014169 + T-rich Low_complexity Low_complexity 5 76 0 1385 197 31 24 chr2 194252109 194252403 -59004180 - AluJo SINE Alu -16 296 1 22 0 0 0 chr2 194252431 194252453 -59004130 + AT_rich Low_complexity Low_complexity 1 22 0 195 350 70 48 chr2 194253203 194253389 -59003194 + L2 LINE L2 2864 3053 -219 22 80 0 0 chr2 194254019 194254069 -59002514 + AT_rich Low_complexity Low_complexity 1 50 0 26 30 0 0 chr2 194254408 194254441 -59002142 + AT_rich Low_complexity Low_complexity 1 33 0 223 261 0 0 chr2 194260952 194260998 -58995585 + polypurine Low_complexity Low_complexity 2 47 0 1634 190 72 79 chr2 194264601 194265032 -58991551 + MSTA LTR MaLR 1 428 0 6393 199 43 51 chr2 194265032 194265597 -58990986 + MSTA-int LTR MaLR 1 569 -1082 2100 136 0 7 chr2 194265597 194265898 -58990685 + AluSx SINE Alu 1 299 -13 6393 199 43 51 chr2 194265898 194265932 -58990651 + MSTA-int LTR MaLR 569 602 -1049 234 0 0 0 chr2 194265932 194265958 -58990625 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 6393 199 43 51 chr2 194265958 194266834 -58989749 + MSTA-int LTR MaLR 602 1465 -186 26 0 0 0 chr2 194267149 194267175 -58989408 + AT_rich Low_complexity Low_complexity 1 26 0 271 240 115 41 chr2 194268820 194268929 -58987654 + MIR SINE MIR 6 110 -98 25 31 0 0 chr2 194269157 194269189 -58987394 + AT_rich Low_complexity Low_complexity 1 32 0 1349 199 68 0 chr2 194270978 194271087 -58985496 + AluJo SINE Alu 11 111 -201 258 56 0 0 chr2 194271087 194271123 -58985460 + (TAAAA)n Simple_repeat Simple_repeat 1 36 0 1349 199 68 0 chr2 194271123 194271264 -58985319 + AluJo SINE Alu 111 278 -34 393 221 25 13 chr2 194271264 194271422 -58985161 + GA-rich Low_complexity Low_complexity 2 161 0 3737 237 63 25 chr2 194271909 194272327 -58984256 + L1MB3 LINE L1 629 1030 -5614 1079 184 4 26 chr2 194272327 194272560 -58984023 + L1MA3 LINE L1 6078 6305 0 3737 237 63 25 chr2 194272560 194273946 -58982637 + L1MB3 LINE L1 1030 2821 -3823 248 250 0 0 chr2 194273949 194274017 -58982566 + L1MB3 LINE L1 2884 2951 -3693 1408 163 227 7 chr2 194274017 194274317 -58982266 + MER47A DNA MER2_type 1 366 0 8737 219 51 37 chr2 194274318 194274469 -58982114 + L1MB3 LINE L1 2951 3098 -3583 2516 117 5 11 chr2 194274469 194274846 -58981737 + THE1C LTR MaLR 1 375 0 8737 219 51 37 chr2 194274846 194276054 -58980529 + L1MB3 LINE L1 3098 4287 -2394 1798 182 0 7 chr2 194276054 194276356 -58980227 + AluJb SINE Alu 1 300 -12 8737 219 51 37 chr2 194276356 194278670 -58977913 + L1MB3 LINE L1 4287 6674 -7 276 343 82 15 chr2 194279673 194279807 -58976776 - MIR3 SINE MIR 0 208 66 843 207 53 11 chr2 194279812 194280000 -58976583 + L1PB4 LINE L1 5958 6153 -3 251 298 173 19 chr2 194280133 194280237 -58976346 - L2 LINE L2 -2 3270 3151 1813 166 42 12 chr2 194280306 194280643 -58975940 + MER7A DNA MER2_type 2 346 0 1071 281 108 31 chr2 194280645 194281147 -58975436 + L2 LINE L2 2751 3285 -28 682 254 17 17 chr2 194281151 194281324 -58975259 - L2 LINE L2 -900 2414 2242 258 343 74 9 chr2 194281811 194281919 -58974664 - MIR SINE MIR -113 149 35 305 305 39 23 chr2 194282179 194282307 -58974276 - MIR3 SINE MIR -15 193 64 323 321 102 31 chr2 194283675 194283871 -58972712 + L1MDa LINE L1 34 243 -6297 320 332 36 18 chr2 194284576 194284799 -58971784 + L1MDa LINE L1 1025 1251 -5292 1903 190 3 3 chr2 194284841 194285183 -58971400 + MER2 DNA MER2_type 3 344 0 252 271 181 77 chr2 194285212 194285367 -58971216 - MER5B DNA MER1_type -4 174 4 242 256 34 111 chr2 194286536 194286653 -58969930 - MIR SINE MIR -114 148 41 339 349 36 6 chr2 194286675 194286841 -58969742 - MER102a DNA MER1_type -9 321 151 36 53 0 0 chr2 194286961 194287018 -58969565 + AT_rich Low_complexity Low_complexity 1 57 0 292 342 0 0 chr2 194287375 194287454 -58969129 + MIR SINE MIR 34 112 -96 26 30 0 0 chr2 194288718 194288751 -58967832 + AT_rich Low_complexity Low_complexity 1 33 0 1141 232 63 17 chr2 194289533 194289835 -58966748 - MER58B DNA MER1_type -3 338 23 3664 71 22 8 chr2 194289937 194290561 -58966022 + MER11A LTR ERVK 1 871 -395 1849 77 35 4 chr2 194290555 194290814 -58965769 + MER11A LTR ERVK 1000 1266 0 * 1998 126 40 7 chr2 194290948 194291249 -58965334 + AluSq SINE Alu 1 311 -2 1150 300 124 49 chr2 194291406 194292619 -58963964 + L1M4 LINE L1 9 1313 -5229 * 2015 207 26 81 chr2 194292617 194292838 -58963745 + L1MB4 LINE L1 5560 5792 -388 369 0 0 0 chr2 194292838 194292879 -58963704 + (TG)n Simple_repeat Simple_repeat 2 42 0 2015 207 26 81 chr2 194292879 194293309 -58963274 + L1MB4 LINE L1 5792 6175 -5 1430 203 100 3 chr2 194293313 194293703 -58962880 + L1M4 LINE L1 1293 1720 -4926 * 4623 200 67 6 chr2 194293696 194294734 -58961849 + L1M4c LINE L1 16 1116 -5268 2196 38 0 0 chr2 194294726 194294993 -58961590 - L1PA3 LINE L1 -176 5979 5713 * 1982 177 74 0 chr2 194295375 194295782 -58960801 + L1M4c LINE L1 1103 1539 -4845 2250 68 3 56 chr2 194295799 194296136 -58960447 - L1PA7 LINE L1 -22 6132 5814 * 34486 36 17 3 chr2 194296133 194302169 -58954414 - L1PA2 LINE L1 -1 6154 4 7251 85 5 1 chr2 194302169 194303605 -58952978 - L1PA7 LINE L1 -324 5830 4391 * 8530 81 4 6 chr2 194303604 194304743 -58951840 + L1P LINE L1 3133 4269 -1877 4527 174 57 5 chr2 194304739 194305674 -58950909 + L1M4c LINE L1 1518 2500 -3884 * 1095 182 28 28 chr2 194305680 194305933 -58950650 + L1MB3 LINE L1 5823 6075 -108 2496 186 36 2 chr2 194305933 194306375 -58950208 - MSTB2 LTR MaLR 0 457 1 325 146 0 0 chr2 194306375 194306430 -58950153 - MLT-int LTR MaLR 0 1735 1681 2609 270 81 25 chr2 194306439 194307287 -58949296 - MSTB2-int LTR MaLR -754 897 2 1852 186 0 0 chr2 194307288 194307584 -58948999 - MSTB2 LTR MaLR 0 457 162 1361 111 0 53 chr2 194307587 194307794 -58948789 + AluSx SINE Alu 1 196 -116 1261 215 4 16 chr2 194357806 194358062 -58898521 + MER4D LTR ERV1 641 893 -10 597 253 55 0 chr2 194358074 194358220 -58898363 - L1MCc LINE L1 -6147 276 123 220 77 39 39 chr2 194358225 194358277 -58898306 + A-rich Low_complexity Low_complexity 2 53 0 993 166 0 34 chr2 194358283 194358458 -58898125 - AluJb SINE Alu -39 273 105 2813 165 90 14 chr2 194358538 194359115 -58897468 + LTR29 LTR ERV1 1 621 -1 28 0 0 0 chr2 194359152 194359180 -58897403 + AT_rich Low_complexity Low_complexity 1 28 0 3602 159 13 0 chr2 194359451 194360061 -58896522 - L1PA16 LINE L1 0 6166 5549 551 191 0 27 chr2 194360164 194360274 -58896309 + MSTB LTR MaLR 320 426 0 189 394 114 6 chr2 194360311 194360486 -58896097 + L2 LINE L2 2561 2754 -560 2602 39 0 7 chr2 194361236 194361546 -58895037 + AluY SINE Alu 1 308 -3 23 68 0 0 chr2 194362667 194362711 -58893872 + AT_rich Low_complexity Low_complexity 1 44 0 265 276 79 0 chr2 194363870 194363946 -58892637 - MER5A DNA MER1_type -77 112 31 2550 169 7 0 chr2 194363946 194364367 -58892216 + MSTC LTR MaLR 1 424 -4 4276 246 56 81 chr2 194364373 194365884 -58890699 + MSTC-int LTR MaLR 2 1473 -262 557 91 11 0 chr2 194365985 194366097 -58890486 - L1P LINE L1 -812 5334 5224 3376 237 66 27 chr2 194366279 194366472 -58890111 - L1MCb LINE L1 -4740 1824 1640 921 101 27 27 chr2 194366472 194366621 -58889962 - L1MA3 LINE L1 0 6305 6157 3376 237 66 27 chr2 194366621 194368164 -58888419 - L1MCb LINE L1 -4924 1640 8 4421 20 0 0 chr2 194368173 194368682 -58887901 - L1PA3 LINE L1 -8 6147 5639 243 289 92 46 chr2 194368723 194368875 -58887708 + L2 LINE L2 3154 3312 -1 453 202 149 35 chr2 194369998 194370112 -58886471 + MER5A DNA MER1_type 24 150 -39 1243 183 62 12 chr2 194370113 194370354 -58886229 + AluJb SINE Alu 19 271 -41 23 0 0 0 chr2 194370354 194370377 -58886206 + AT_rich Low_complexity Low_complexity 1 23 0 193 260 0 0 chr2 194370377 194370427 -58886156 + MER5A DNA MER1_type 140 189 0 1117 242 7 38 chr2 194370483 194370776 -58885807 - MLT1E2 LTR MaLR -337 289 6 1315 252 39 77 chr2 194370787 194371493 -58885090 - MER31-int LTR ERV1 -1034 3902 3160 34 75 0 33 chr2 194371598 194371635 -58884948 + AT_rich Low_complexity Low_complexity 1 38 -78 2425 44 0 14 chr2 194371635 194371931 -58884652 - AluY SINE Alu -17 294 3 34 75 0 33 chr2 194371931 194372013 -58884570 + AT_rich Low_complexity Low_complexity 38 116 0 183 313 21 0 chr2 194372124 194372172 -58884411 - MER5A DNA MER1_type -87 102 54 528 224 0 51 chr2 194372358 194372514 -58884069 - MER31-int LTR ERV1 -1870 3066 2919 246 252 139 70 chr2 194373435 194373550 -58883033 - L2 LINE L2 -2 3311 3189 200 373 20 29 chr2 194373896 194373998 -58882585 - MIR SINE MIR -85 123 23 228 332 123 79 chr2 194374274 194374614 -58881969 + L2 LINE L2 2917 3271 -1 31 68 0 0 chr2 194374614 194374673 -58881910 + AT_rich Low_complexity Low_complexity 1 59 0 22 0 0 0 chr2 194374744 194374766 -58881817 + AT_rich Low_complexity Low_complexity 1 22 0 1895 90 4 8 chr2 194374776 194375031 -58881552 + AluSq SINE Alu 45 298 -15 625 305 58 18 chr2 194375817 194376040 -58880543 + MIR SINE MIR 31 262 0 1845 170 0 10 chr2 194376338 194376649 -58879934 - AluJo SINE Alu -4 308 1 22 0 0 0 chr2 194377275 194377297 -58879286 + AT_rich Low_complexity Low_complexity 1 22 0 1459 280 58 71 chr2 194378239 194378787 -58877796 + L2 LINE L2 1930 2467 -847 270 0 0 0 chr2 194378787 194378817 -58877766 + (CA)n Simple_repeat Simple_repeat 2 31 0 1459 280 58 71 chr2 194378817 194379024 -58877559 + L2 LINE L2 2467 2675 -639 253 250 0 0 chr2 194379393 194379457 -58877126 + L1MC4 LINE L1 6640 6703 -1339 234 233 17 0 chr2 194379424 194379484 -58877099 - L1MCa LINE L1 -4362 2064 2004 * 238 287 23 0 chr2 194379524 194379611 -58876972 - L1MC4 LINE L1 -1339 6703 6615 233 296 23 0 chr2 194379532 194379620 -58876963 + L1MC4 LINE L1 6614 6703 -1339 * 282 194 0 0 chr2 194379690 194379752 -58876831 + (TA)n Simple_repeat Simple_repeat 2 63 0 27 62 0 0 chr2 194380446 194380494 -58876089 + AT_rich Low_complexity Low_complexity 1 48 0 195 174 0 87 chr2 194380898 194380944 -58875639 + L2 LINE L2 3261 3302 -11 243 0 0 0 chr2 194382137 194382164 -58874419 + (TC)n Simple_repeat Simple_repeat 2 28 0 230 0 0 32 chr2 194382163 194382194 -58874389 + (TA)n Simple_repeat Simple_repeat 1 30 0 * 24 0 0 0 chr2 194383262 194383286 -58873297 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr2 194384760 194384783 -58871800 + AT_rich Low_complexity Low_complexity 1 23 0 257 228 0 18 chr2 194386293 194386350 -58870233 + (CA)n Simple_repeat Simple_repeat 2 57 0 1915 137 96 6 chr2 194386905 194387240 -58869343 + MSTA LTR MaLR 1 365 -63 1627 326 61 28 chr2 194387493 194388214 -58868369 - L2 LINE L2 -343 2971 2227 527 259 164 26 chr2 194388437 194388827 -58867756 + L1M4 LINE L1 4478 4921 -1225 687 273 46 0 chr2 194388841 194389035 -58867548 - MIR SINE MIR -2 260 58 2514 66 0 0 chr2 194389163 194389467 -58867116 - AluY SINE Alu -7 304 1 261 31 0 0 chr2 194389494 194389526 -58867057 - L1PA4 LINE L1 -299 5856 5825 2183 34 0 4 chr2 194389526 194389793 -58866790 + L1PA4 LINE L1 5887 6152 -3 26 50 0 0 chr2 194389793 194389833 -58866750 + AT_rich Low_complexity Low_complexity 1 40 0 402 282 138 56 chr2 194390869 194391245 -58865338 - MLT1H LTR MaLR -30 519 113 319 365 104 14 chr2 194393143 194393365 -58863218 + L3 LINE CR1 1302 1543 -34 1143 246 54 92 chr2 194393989 194394038 -58862545 - MLT2B3 LTR ERVL 0 520 471 264 30 0 0 chr2 194394038 194394071 -58862512 + (GA)n Simple_repeat Simple_repeat 2 34 0 1143 246 54 92 chr2 194394071 194394596 -58861987 - MLT2B3 LTR ERVL -49 471 1 7198 55 8 4 chr2 194395767 194397001 -58859582 + L1PA8 LINE L1 4936 6171 -1 1584 178 12 83 chr2 194397278 194397724 -58858859 - L1MB8 LINE L1 0 6178 5758 2079 125 113 94 chr2 194397868 194398292 -58858291 + Tigger2 DNA MER2_type 1 2716 -2 413 324 45 52 chr2 194398314 194398604 -58857979 - L1MEc LINE L1 -4371 2767 2480 2275 278 56 52 chr2 194398757 194400632 -58855951 - L1MEc LINE L1 -4543 2416 551 4837 48 2 0 chr2 194400632 194401233 -58855350 + L1PA5 LINE L1 5553 6154 0 207 0 0 0 chr2 194401237 194401260 -58855323 + (TA)n Simple_repeat Simple_repeat 1 23 0 2275 278 56 52 chr2 194401260 194401568 -58855015 - L1MEc LINE L1 -6410 549 11 548 316 92 9 chr2 194401569 194401797 -58854786 + LTR16C LTR ERVL 243 489 -2 268 340 7 48 chr2 194401894 194402041 -58854542 - L2 LINE L2 -1736 1578 1438 316 248 29 7 chr2 194403449 194403586 -58852997 + (TA)n Simple_repeat Simple_repeat 2 141 0 279 0 0 0 chr2 194403648 194403679 -58852904 + (CA)n Simple_repeat Simple_repeat 2 32 0 288 70 0 0 chr2 194403690 194403733 -58852850 + (GA)n Simple_repeat Simple_repeat 2 44 0 29 47 0 0 chr2 194403904 194403947 -58852636 + AT_rich Low_complexity Low_complexity 1 43 0 23 0 0 0 chr2 194404553 194404576 -58852007 + AT_rich Low_complexity Low_complexity 1 23 0 2174 119 0 0 chr2 194404713 194405029 -58851554 + AluSg SINE Alu 1 316 0 919 331 119 36 chr2 194405471 194406470 -58850113 + L2 LINE L2 819 1900 -1414 1089 235 9 0 chr2 194408190 194408411 -58848172 - MER58A DNA MER1_type 0 224 2 231 374 86 17 chr2 194408446 194408620 -58847963 + MIR SINE MIR 7 192 -70 6665 68 17 0 chr2 194409190 194410687 -58845896 + L1PA7 LINE L1 4637 6148 -6 4895 128 73 5 chr2 194410911 194411750 -58844833 - Tigger3b DNA MER2_type 0 1231 336 308 100 0 0 chr2 194411754 194411804 -58844779 + Tigger3(Golem) DNA MER2_type 272 321 -2708 1123 264 28 45 chr2 194411812 194412164 -58844419 + LTR40a LTR ERVL 151 496 -23 306 268 78 14 chr2 194412182 194412324 -58844259 - L1MEc LINE L1 -5544 852 702 1197 318 40 31 chr2 194412348 194412926 -58843657 - L1MEc LINE L1 -5785 611 29 38 0 0 20 chr2 194413160 194413190 -58843393 + AT_rich Low_complexity Low_complexity 1 31 -17 7332 20 0 1 chr2 194413190 194414771 -58841812 - L1PA3 LINE L1 -2 6153 4608 38 0 0 20 chr2 194414771 194414789 -58841794 + AT_rich Low_complexity Low_complexity 31 48 0 2185 119 82 36 chr2 194416193 194416606 -58839977 - MSTB1 LTR MaLR 0 432 1 387 332 87 44 chr2 194416648 194417238 -58839345 + L1MEd LINE L1 849 1617 -873 22 70 0 0 chr2 194418689 194418732 -58837851 + AT_rich Low_complexity Low_complexity 1 43 0 602 222 49 6 chr2 194418949 194419111 -58837472 + MER3 DNA MER1_type 2 123 -86 3203 166 25 11 chr2 194419112 194419683 -58836900 + Tigger1 DNA MER2_type 2 580 -1838 23 68 0 0 chr2 194419917 194419961 -58836622 + AT_rich Low_complexity Low_complexity 1 44 0 681 164 7 64 chr2 194419961 194420101 -58836482 - FLAM_C SINE Alu -1 132 1 473 175 10 0 chr2 194420586 194420689 -58835894 + GA-rich Low_complexity Low_complexity 3 106 0 257 374 69 0 chr2 194421087 194421218 -58835365 - MIR SINE MIR -119 143 4 1477 244 24 12 chr2 194421481 194421778 -58834805 + MLT1A1 LTR MaLR 1 301 -64 2359 78 0 0 chr2 194421778 194422086 -58834497 - AluY SINE Alu -3 308 1 1477 244 24 12 chr2 194422086 194422152 -58834431 + MLT1A1 LTR MaLR 301 365 0 372 391 86 36 chr2 194422868 194423254 -58833329 - L2 LINE L2 -2 3270 2866 212 245 0 0 chr2 194423332 194423381 -58833202 + T-rich Low_complexity Low_complexity 3 51 0 1413 183 10 38 chr2 194424858 194425128 -58831455 + AluJb SINE Alu 1 263 -68 2309 143 92 0 chr2 194425128 194425520 -58831063 - MSTA LTR MaLR 0 428 1 1413 183 10 38 chr2 194425520 194425588 -58830995 + AluJb SINE Alu 263 331 0 5276 186 14 16 chr2 194426957 194428344 -58828239 - L1MA6 LINE L1 -6 6294 4906 2459 167 41 6 chr2 194428347 194428837 -58827746 - L1MA4A LINE L1 -8 6997 6491 333 68 0 0 chr2 194428842 194428886 -58827697 + (TA)n Simple_repeat Simple_repeat 1 44 0 11781 210 61 47 chr2 194428924 194429747 -58826836 - L1MA4A LINE L1 -609 6277 5467 579 51 0 0 chr2 194429747 194429826 -58826757 + (TAGA)n Simple_repeat Simple_repeat 4 82 0 11781 210 61 47 chr2 194429826 194429872 -58826711 - L1MA4A LINE L1 -1419 5467 5423 1311 224 32 11 chr2 194429872 194430149 -58826434 - AluJb SINE Alu -27 285 3 11781 210 61 47 chr2 194430149 194432636 -58823947 - L1MA4A LINE L1 -1463 5423 2915 2409 74 6 10 chr2 194432636 194432948 -58823635 - AluY SINE Alu 0 311 1 11781 210 61 47 chr2 194432948 194434288 -58822295 - L1MA4A LINE L1 -3971 2915 1595 247 182 0 0 chr2 194434891 194434935 -58821648 + MLT2F LTR ERVL 618 661 -2 1078 228 80 46 chr2 194435017 194435368 -58821215 - MLT1A1 LTR MaLR 0 365 3 275 308 88 60 chr2 194435406 194435870 -58820713 + HERVL-F LTR ERVL 117 593 -5061 475 290 34 113 chr2 194435967 194436409 -58820174 + MLT1F1-int LTR MaLR 961 1367 -4 301 252 7 16 chr2 194436411 194436527 -58820056 + MLT1F1 LTR MaLR 1 115 -452 3823 181 26 49 chr2 194436527 194437382 -58819201 + L1MA10 LINE L1 5488 6322 -12 1284 235 100 51 chr2 194437389 194437819 -58818764 + MLT1F1 LTR MaLR 117 567 0 1484 215 60 6 chr2 194437921 194437979 -58818604 - MER2 DNA MER2_type -10 335 282 2280 98 7 3 chr2 194437979 194438284 -58818299 + AluSg SINE Alu 1 306 -4 2223 86 7 7 chr2 194438284 194438585 -58817998 + AluSc SINE Alu 1 302 -7 1484 215 60 6 chr2 194438585 194438841 -58817742 - MER2 DNA MER2_type -62 283 3 428 316 129 18 chr2 194439503 194439728 -58816855 + MIR SINE MIR 2 251 -11 1233 240 101 55 chr2 194439734 194440229 -58816354 + MLT2B1 LTR ERVL 1 518 -2 1694 181 54 3 chr2 194440804 194441175 -58815408 + L1 LINE L1 4024 4413 -1733 1186 108 85 27 chr2 194441190 194441413 -58815170 + L1MA9 LINE L1 6072 6307 -5 1049 61 8 0 chr2 194441741 194441872 -58814711 + AluY SINE Alu 160 291 -20 24 32 0 0 chr2 194441872 194441903 -58814680 + AT_rich Low_complexity Low_complexity 1 31 0 3981 128 14 6 chr2 194442036 194442660 -58813923 - L1MA8 LINE L1 -121 6170 5542 757 97 0 0 chr2 194442793 194442896 -58813687 - L1P3 LINE L1 -6358 103 1 250 126 185 0 chr2 194443162 194443281 -58813302 + (TTAA)n Simple_repeat Simple_repeat 2 142 0 235 250 18 0 chr2 194443376 194443432 -58813151 + (CATATA)n Simple_repeat Simple_repeat 6 62 0 420 354 43 10 chr2 194443456 194443665 -58812918 + MIR SINE MIR 9 224 -38 26 30 0 0 chr2 194443728 194443761 -58812822 + AT_rich Low_complexity Low_complexity 1 33 0 445 160 0 90 chr2 194443796 194443923 -58812660 - FLAM_C SINE Alu 0 147 30 1680 193 0 7 chr2 194444155 194444455 -58812128 - AluJo SINE Alu -10 302 5 216 158 0 0 chr2 194444634 194444672 -58811911 + (TA)n Simple_repeat Simple_repeat 1 38 0 230 250 0 62 chr2 194444749 194444845 -58811738 + L1MC4 LINE L1 6614 6703 -1339 225 0 0 0 chr2 194444873 194444898 -58811685 + (CA)n Simple_repeat Simple_repeat 2 26 0 301 275 89 9 chr2 194444932 194445077 -58811506 - MLT1J1 LTR MaLR -291 155 43 1598 227 51 12 chr2 194445217 194445631 -58810952 + MER63B DNA MER1_type 2 431 -5 21 36 0 0 chr2 194445722 194445750 -58810833 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr2 194445804 194445833 -58810750 + AT_rich Low_complexity Low_complexity 1 29 0 220 278 83 0 chr2 194445875 194445947 -58810636 - L2 LINE L2 -1 3312 3235 410 359 145 16 chr2 194446581 194447125 -58809458 - L2 LINE L2 -175 3138 2518 985 208 10 10 chr2 194447150 194447347 -58809236 + MER20 DNA MER1_type 23 219 0 21 100 0 0 chr2 194447475 194447545 -58809038 + AT_rich Low_complexity Low_complexity 1 70 0 1792 281 94 15 chr2 194447901 194448708 -58807875 - L1ME3A LINE L1 0 6170 5300 269 235 44 7 chr2 194449391 194449527 -58807056 + (TA)n Simple_repeat Simple_repeat 2 142 0 1698 268 14 76 chr2 194449537 194450165 -58806418 + L1MD2 LINE L1 1 589 -5951 1683 100 40 3 chr2 194450201 194450493 -58806090 - L1PB1 LINE L1 0 6151 5776 366 261 0 22 chr2 194450515 194450607 -58805976 + L1MC4 LINE L1 6614 6703 -1339 269 123 0 18 chr2 194450652 194450709 -58805874 + (TA)n Simple_repeat Simple_repeat 2 57 0 3653 174 1 6 chr2 194450709 194451752 -58804831 - L1P5 LINE L1 -356 5795 4759 5030 201 107 16 chr2 194451755 194452992 -58803591 + L1P5 LINE L1 3436 4784 -1362 4833 192 89 42 chr2 194452998 194453561 -58803022 + L1MD2 LINE L1 1009 1544 -4996 351 0 0 0 chr2 194453561 194453600 -58802983 + (CA)n Simple_repeat Simple_repeat 2 40 0 4833 192 89 42 chr2 194453600 194454650 -58801933 + L1MD2 LINE L1 1544 2696 -3844 2574 162 14 0 chr2 194454650 194455064 -58801519 - MSTA LTR MaLR 0 428 9 626 179 31 49 chr2 194455072 194455234 -58801349 - MSTA-int LTR MaLR 0 1651 1493 1965 212 55 57 chr2 194455234 194455847 -58800736 - LTR9 LTR ERV1 0 612 1 14371 148 10 15 chr2 194455847 194458121 -58798462 - HUERS-P3 LTR ERV1 -1 8918 6658 793 251 11 6 chr2 194458133 194458316 -58798267 + HUERS-P3 LTR ERV1 90 273 -8646 3877 237 92 61 chr2 194458318 194459434 -58797149 + L1MD2 LINE L1 4063 5143 -1610 2514 138 75 38 chr2 194459434 194459913 -58796670 + LOR1a LTR ERV1 1 497 0 3877 237 92 61 chr2 194459913 194461400 -58795183 + L1MD2 LINE L1 5143 6752 -1 351 288 159 30 chr2 194461779 194462150 -58794433 - L1M4 LINE L1 -1378 4768 4350 443 350 56 13 chr2 194462468 194462610 -58793973 + MLT1J2 LTR MaLR 84 241 -209 2844 148 11 2 chr2 194462610 194463064 -58793519 + LTR22A LTR ERVK 1 458 0 443 350 56 13 chr2 194463064 194463155 -58793428 + MLT1J2 LTR MaLR 241 327 -123 318 50 0 0 chr2 194463481 194463521 -58793062 + (CA)n Simple_repeat Simple_repeat 1 40 0 256 281 107 10 chr2 194463544 194463714 -58792869 - L1M4 LINE L1 -2192 3954 3759 352 137 0 0 chr2 194463873 194463924 -58792659 - MLT2D LTR ERVL 0 414 364 256 128 0 0 chr2 194463951 194463990 -58792593 - MLT2C1 LTR ERVL -12 385 347 441 95 0 0 chr2 194463997 194464060 -58792523 + (TA)n Simple_repeat Simple_repeat 1 63 0 2364 209 43 10 chr2 194464079 194464571 -58792012 + MST-int LTR MaLR 595 1102 -549 1730 106 4 16 chr2 194464574 194464829 -58791754 + MSTA-int LTR MaLR 1329 1580 0 1817 168 121 16 chr2 194464829 194465216 -58791367 + MSTA LTR MaLR 1 428 0 24 0 0 0 chr2 194465261 194465285 -58791298 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr2 194466148 194466170 -58790413 + AT_rich Low_complexity Low_complexity 1 22 0 389 153 0 0 chr2 194466247 194466305 -58790278 + MLT2B2 LTR ERVL 1 58 -457 1122 196 171 12 chr2 194466305 194466491 -58790092 - MSTA LTR MaLR 0 428 273 219 36 0 0 chr2 194466491 194466519 -58790064 + (GA)n Simple_repeat Simple_repeat 1 28 0 1122 196 171 12 chr2 194466519 194466689 -58789894 - MSTA LTR MaLR -155 273 8 * 1678 246 90 9 chr2 194466686 194467073 -58789510 + MLT2B2 LTR ERVL 53 478 -37 209 33 33 0 chr2 194467073 194467103 -58789480 + (TAGA)n Simple_repeat Simple_repeat 4 34 0 1678 246 90 9 chr2 194467103 194467137 -58789446 + MLT2B2 LTR ERVL 478 508 -7 24 0 0 0 chr2 194467523 194467547 -58789036 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 194467903 194467924 -58788659 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 194467954 194467983 -58788600 + AT_rich Low_complexity Low_complexity 1 29 0 1110 56 0 0 chr2 194467999 194468142 -58788441 - L1P LINE L1 -2113 4033 3891 203 370 62 29 chr2 194468352 194468560 -58788023 - L2 LINE L2 -560 2754 2540 2214 168 38 12 chr2 194468564 194468981 -58787602 - MSTA LTR MaLR 0 428 1 2481 162 115 2 chr2 194469152 194469646 -58786937 - MER44D DNA MER2_type 0 605 1 1837 187 22 8 chr2 194470116 194470475 -58786108 - MLT1A1 LTR MaLR -1 364 1 186 313 83 42 chr2 194470488 194470584 -58785999 + L2 LINE L2 3173 3272 0 268 269 15 0 chr2 194470843 194470910 -58785673 - L2 LINE L2 -9 3304 3237 2462 122 6 3 chr2 194471109 194471470 -58785113 - THE1B LTR MaLR 0 364 3 4078 34 0 2 chr2 194472333 194472831 -58783752 - L1P LINE L1 -2143 4003 3507 7306 34 9 0 chr2 194472831 194473997 -58782586 + L1PA3 LINE L1 4979 6152 -3 214 147 0 0 chr2 194474533 194474567 -58782016 + (GA)n Simple_repeat Simple_repeat 1 34 0 509 281 75 54 chr2 194474755 194475089 -58781494 + L1M4 LINE L1 2959 3299 -2847 1830 195 140 102 chr2 194476196 194476878 -58779705 - LTR8A LTR ERV1 0 727 1 341 247 27 107 chr2 194477192 194477342 -58779241 - MER5B DNA MER1_type -40 138 1 459 224 204 7 chr2 194477496 194477648 -58778935 + MER58A DNA MER1_type 43 224 0 509 197 109 15 chr2 194477750 194477887 -58778696 + MLT1B LTR MaLR 5 154 -236 1591 255 45 22 chr2 194477976 194478423 -58778160 - LTR26 LTR ERV1 0 603 147 782 227 41 10 chr2 194478534 194478728 -58777855 + MLT1B LTR MaLR 190 389 -1 212 57 0 29 chr2 194478808 194478843 -58777740 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 5173 18 15 2 chr2 194478843 194479445 -58777138 - L1PA3 LINE L1 -24 6131 5522 995 295 48 9 chr2 194480438 194480753 -58775830 + LTR40a LTR ERVL 193 519 0 666 230 109 42 chr2 194480782 194481021 -58775562 + MLT1E LTR MaLR 1 255 -338 1024 267 8 4 chr2 194481060 194481300 -58775283 + MLT1E LTR MaLR 353 593 0 508 269 120 5 chr2 194481304 194481512 -58775071 - MLT1H LTR MaLR -302 247 8 728 253 131 0 chr2 194482356 194482554 -58774029 - MER58A DNA MER1_type 0 224 1 615 186 35 17 chr2 194482562 194482734 -58773849 - MER33 DNA MER1_type 0 363 189 567 228 39 0 chr2 194482821 194482948 -58773635 - MER33 DNA MER1_type -191 133 2 230 304 7 22 chr2 194484141 194484276 -58772307 + (CAGAGA)n Simple_repeat Simple_repeat 5 137 0 345 261 127 8 chr2 194484276 194484410 -58772173 + L1ME4a LINE L1 5964 6113 -8 34 55 0 0 chr2 194484448 194484503 -58772080 + AT_rich Low_complexity Low_complexity 1 55 0 568 148 0 10 chr2 194485532 194485633 -58770950 - AluSg/x SINE Alu -4 308 209 6864 21 8 4 chr2 194485633 194486910 -58769673 + L1PA4 LINE L1 4762 6048 -107 189 0 0 0 chr2 194486925 194486946 -58769637 + (TAA)n Simple_repeat Simple_repeat 3 23 0 246 81 0 0 chr2 194486947 194486984 -58769599 + (TTA)n Simple_repeat Simple_repeat 3 39 0 22 56 0 0 chr2 194487186 194487222 -58769361 + AT_rich Low_complexity Low_complexity 1 36 0 673 317 19 75 chr2 194487388 194487748 -58768835 - MLT1I LTR MaLR -22 387 48 794 222 0 31 chr2 194487781 194487943 -58768640 + THE1-int LTR MaLR 608 764 -816 753 293 135 39 chr2 194487946 194488332 -58768251 - MLT1F LTR MaLR -119 423 1 691 338 108 12 chr2 194488332 194488731 -58767852 - L2 LINE L2 -1822 1492 1056 24 0 0 0 chr2 194488970 194488994 -58767589 + AT_rich Low_complexity Low_complexity 1 24 0 309 265 0 0 chr2 194489479 194489547 -58767036 - L1ME LINE L1 -531 5639 5572 861 330 79 12 chr2 194489736 194490296 -58766287 - ERVL LTR ERVL -800 4964 4368 1419 386 50 51 chr2 194490618 194491464 -58765119 + HERV16 LTR ERVL 731 1575 -3421 1121 311 41 21 chr2 194491752 194492235 -58764348 + HERV16 LTR ERVL 1999 2491 -2505 776 338 114 10 chr2 194492546 194492940 -58763643 + LTR16A LTR ERVL 16 450 0 1031 224 18 18 chr2 194493678 194494004 -58762579 + L1M4 LINE L1 4906 5231 -915 4537 154 21 44 chr2 194495251 194496087 -58760496 + Tigger1 DNA MER2_type 1 817 -1601 245 100 160 0 chr2 194496099 194496149 -58760434 + Tigger1 DNA MER2_type 1412 1469 -949 3247 291 76 54 chr2 194496207 194497679 -58758904 - L2 LINE L2 -631 2683 1180 1033 313 103 17 chr2 194497680 194498144 -58758439 - L2 LINE L2 -2655 659 156 1744 194 57 46 chr2 194498145 194498582 -58758001 - MER63D DNA MER1_type 0 1060 619 820 201 210 30 chr2 194498614 194498947 -58757636 - MER63D DNA MER1_type -619 442 50 239 172 0 17 chr2 194498996 194499054 -58757529 + (TA)n Simple_repeat Simple_repeat 1 57 0 310 200 47 24 chr2 194499054 194499094 -58757489 - MER63D DNA MER1_type -974 87 49 321 26 0 0 chr2 194499094 194499132 -58757451 + (CA)n Simple_repeat Simple_repeat 2 39 0 310 200 47 24 chr2 194499132 194499176 -58757407 - MER63D DNA MER1_type -1012 49 1 252 247 25 49 chr2 194499183 194499264 -58757319 - L2 LINE L2 -3178 136 58 26 50 0 0 chr2 194499744 194499784 -58756799 + AT_rich Low_complexity Low_complexity 1 40 0 251 324 42 33 chr2 194499944 194500157 -58756426 - HAL1b LINE L1 -464 884 670 633 251 23 128 chr2 194500215 194500259 -58756324 - MLT2D LTR ERVL 0 397 350 1222 29 40 0 chr2 194500259 194500432 -58756151 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 633 251 23 128 chr2 194500432 194500730 -58755853 - MLT2D LTR ERVL -47 350 91 1730 218 35 12 chr2 194500818 194501217 -58755366 + MER72-int LTR ERV1 6351 6758 0 4137 158 28 9 chr2 194501227 194501905 -58754678 + MER72 LTR ERV1 5 695 -27 441 232 18 0 chr2 194501931 194502043 -58754540 - MLT2B2 LTR ERVL -401 114 1 273 360 8 0 chr2 194502096 194502221 -58754362 - HAL1b LINE L1 -842 506 381 234 310 0 11 chr2 194502597 194502684 -58753899 + MER90 LTR ERV1 103 188 -387 1157 267 107 26 chr2 194502722 194503152 -58753431 + MLT1D LTR MaLR 40 504 -1 618 274 82 44 chr2 194503167 194503510 -58753073 + MER90 LTR ERV1 242 597 -17 447 113 0 0 chr2 194503564 194503635 -58752948 + (TC)n Simple_repeat Simple_repeat 2 72 0 185 268 0 138 chr2 194503886 194504009 -58752574 + L2 LINE L2 3182 3287 -26 195 356 183 10 chr2 194504027 194504131 -58752452 - L2 LINE L2 -2 3270 3149 1409 207 7 25 chr2 194504231 194504425 -58752158 + AluJo SINE Alu 4 193 -119 3727 98 0 4 chr2 194504425 194504938 -58751645 + MER9 LTR ERVK 1 511 0 1409 207 7 25 chr2 194504938 194505018 -58751565 + AluJo SINE Alu 193 273 -39 28 29 0 0 chr2 194505026 194505061 -58751522 + AT_rich Low_complexity Low_complexity 1 35 0 1239 224 47 50 chr2 194505579 194505963 -58750620 + MLT1B LTR MaLR 8 390 0 23578 168 14 14 chr2 194506074 194510778 -58745805 + L1P4 LINE L1 844 5544 -624 731 90 0 27 chr2 194510878 194510989 -58745594 + L1PA10 LINE L1 6061 6168 0 378 0 0 0 chr2 194511588 194511630 -58744953 + (CA)n Simple_repeat Simple_repeat 1 42 0 206 329 127 0 chr2 194512581 194512660 -58743923 + L2 LINE L2 3173 3261 -11 1693 133 43 0 chr2 194512892 194513147 -58743436 + AluSx SINE Alu 1 266 -46 224 276 12 110 chr2 194513458 194513621 -58742962 + MER5B DNA MER1_type 32 178 0 780 343 78 25 chr2 194515188 194515750 -58740833 + L2 LINE L2 1914 2505 -809 11618 203 40 27 chr2 194515822 194519477 -58737106 - L1MA9 LINE L1 -23 6289 2593 257 214 54 0 chr2 194520458 194520514 -58736069 + MIR SINE MIR 87 145 -63 441 294 79 86 chr2 194520710 194521002 -58735581 + L2 LINE L2 3024 3313 0 7623 22 5 0 chr2 194521513 194522858 -58733725 + L1PA3 LINE L1 4803 6151 -4 31 44 0 0 chr2 194523321 194523366 -58733217 + AT_rich Low_complexity Low_complexity 1 45 0 33 80 0 0 chr2 194523489 194523564 -58733019 + AT_rich Low_complexity Low_complexity 1 75 0 288 289 39 51 chr2 194523842 194523998 -58732585 - MLT1L LTR MaLR -297 318 165 2562 177 56 29 chr2 194524025 194524583 -58732000 + L1MC1 LINE L1 5745 6317 -16 32 57 0 0 chr2 194526179 194526232 -58730351 + AT_rich Low_complexity Low_complexity 1 53 0 2453 55 0 13 chr2 194526527 194526838 -58729745 - AluY SINE Alu -4 307 1 400 285 111 50 chr2 194526935 194527233 -58729350 - L1MC4 LINE L1 -120 7922 7607 255 299 21 0 chr2 194527415 194527512 -58729071 - L1MC4 LINE L1 -544 7498 7400 2490 190 38 14 chr2 194527571 194528077 -58728506 + MER73 LTR ERVL 127 644 0 619 277 64 23 chr2 194528740 194528960 -58727623 + MIR SINE MIR 34 262 0 820 200 18 12 chr2 194530807 194530972 -58725611 + MER5B DNA MER1_type 8 173 -5 2416 150 30 20 chr2 194531056 194531495 -58725088 - MER65A LTR ERV1 -2 443 1 1944 133 77 0 chr2 194531498 194531821 -58724762 + MER7A DNA MER2_type 1 346 0 902 234 58 9 chr2 194531985 194532211 -58724372 + L1MC4 LINE L1 6773 7009 -1033 1306 217 60 28 chr2 194532243 194532607 -58723976 + L1MC4 LINE L1 7238 7613 -429 22 0 0 0 chr2 194532960 194532982 -58723601 + AT_rich Low_complexity Low_complexity 1 22 0 227 299 13 0 chr2 194533929 194534006 -58722577 + (TA)n Simple_repeat Simple_repeat 2 79 0 201 94 0 0 chr2 194534457 194534489 -58722094 + (A)n Simple_repeat Simple_repeat 1 32 0 22 0 0 0 chr2 194534746 194534768 -58721815 + AT_rich Low_complexity Low_complexity 1 22 0 510 257 62 44 chr2 194534967 194535193 -58721390 + L1ME1 LINE L1 5783 6012 -154 * 544 188 83 0 chr2 194535191 194535324 -58721259 + L1MA10 LINE L1 6183 6326 -8 661 194 109 18 chr2 194536015 194536239 -58720344 + L1MC/D LINE L1 5204 5444 -718 37 93 0 0 chr2 194536419 194536526 -58720057 + AT_rich Low_complexity Low_complexity 1 107 0 1470 145 30 0 chr2 194536530 194536799 -58719784 - L1MA5A LINE L1 0 6297 6021 27 49 0 0 chr2 194537086 194537127 -58719456 + AT_rich Low_complexity Low_complexity 1 41 0 804 237 147 0 chr2 194537284 194537482 -58719101 + L1MC/D LINE L1 5497 5723 -621 192 222 94 103 chr2 194537553 194537670 -58718913 - L2 LINE L2 -45 3268 3153 279 266 83 9 chr2 194587680 194587789 -58668794 + L1M4 LINE L1 3182 3298 -2848 2147 171 13 69 chr2 194587826 194588275 -58668308 - MLT2B3 LTR ERVL -130 424 1 1247 257 101 18 chr2 194588275 194588722 -58667861 + L1M4 LINE L1 3332 3815 -2331 1961 144 0 3 chr2 194588912 194589229 -58667354 - AluSx SINE Alu 0 316 1 2430 54 7 0 chr2 194590130 194590425 -58666158 - AluY SINE Alu -12 299 3 338 148 0 0 chr2 194590494 194590548 -58666035 - MLT1J LTR MaLR 0 505 452 449 313 57 23 chr2 194592045 194592221 -58664362 - MLT1J LTR MaLR -92 419 238 1071 263 29 44 chr2 194592322 194592638 -58663945 + MER119 DNA MER1_type 10 320 -263 5003 103 47 5 chr2 194592639 194593417 -58663166 + L1PA13 LINE L1 5327 6143 -20 781 189 59 18 chr2 194593464 194593686 -58662897 + MER119 DNA MER1_type 347 577 -6 311 253 0 13 chr2 194593754 194593829 -58662754 - MLT1L LTR MaLR -541 74 1 24 32 0 0 chr2 194593853 194593884 -58662699 + AT_rich Low_complexity Low_complexity 1 31 0 915 134 30 0 chr2 194595010 194595144 -58661439 + FRAM SINE Alu 30 167 -9 24 0 0 0 chr2 194595436 194595460 -58661123 + AT_rich Low_complexity Low_complexity 1 24 0 1241 211 34 101 chr2 194595555 194595962 -58660621 + MER110 LTR ERV1 97 476 -15 194 200 0 0 chr2 194595974 194596009 -58660574 - MIR SINE MIR -66 142 108 317 308 75 0 chr2 194596158 194596278 -58660305 + MER94 DNA DNA 3 131 -3 1978 136 13 10 chr2 194597265 194597567 -58659016 + AluJb SINE Alu 1 303 -9 2754 47 0 3 chr2 194599897 194600236 -58656347 - L1P LINE L1 -2414 3732 3395 7410 30 9 0 chr2 194600236 194601655 -58654928 + L1PA4 LINE L1 4732 6154 -1 1929 211 79 17 chr2 194602124 194602716 -58653867 + L1MDa LINE L1 1258 1886 -4654 24 0 0 0 chr2 194602841 194602865 -58653718 + AT_rich Low_complexity Low_complexity 1 24 0 2353 148 60 7 chr2 194602949 194603383 -58653200 + L1MB2 LINE L1 5442 5898 -273 182 244 64 26 chr2 194604018 194604096 -58652487 - L3 LINE CR1 -175 1402 1322 21 57 0 0 chr2 194604751 194604786 -58651797 + AT_rich Low_complexity Low_complexity 1 35 0 263 349 0 0 chr2 194605037 194605123 -58651460 + GA-rich Low_complexity Low_complexity 5 90 0 2800 51 3 6 chr2 194605226 194605582 -58651001 + L1PA8 LINE L1 5710 6064 -108 1099 100 0 0 chr2 194605583 194605723 -58650860 + AluYa5 SINE Alu 2 141 -170 717 85 0 0 chr2 194605723 194605817 -58650766 + AluSg/x SINE Alu 192 285 -27 839 78 0 0 chr2 194605844 194605960 -58650623 + L1PA8 LINE L1 6052 6167 -5 464 247 10 0 chr2 194606264 194606361 -58650222 - MER2 DNA MER2_type -247 98 1 360 344 85 43 chr2 194606510 194606792 -58649791 + L3 LINE CR1 203 496 -1081 283 257 0 18 chr2 194607099 194607208 -58649375 + (TTATA)n Simple_repeat Simple_repeat 1 107 0 215 283 33 43 chr2 194608089 194608181 -58648402 + MIR SINE MIR 154 244 -18 207 273 0 0 chr2 194608188 194608232 -58648351 + (TTG)n Simple_repeat Simple_repeat 2 45 0 212 279 23 0 chr2 194608255 194608341 -58648242 + (TTTA)n Simple_repeat Simple_repeat 2 89 0 251 319 17 17 chr2 194608412 194608528 -58648055 - MLT1L LTR MaLR -4 611 496 280 277 96 0 chr2 194608883 194608966 -58647617 + MLT1F LTR MaLR 288 378 -164 1244 182 18 58 chr2 194609596 194609633 -58646950 + AluJo SINE Alu 1 38 -274 2273 97 3 3 chr2 194609633 194609931 -58646652 - AluY SINE Alu -13 298 1 1244 182 18 58 chr2 194609931 194610168 -58646415 + AluJo SINE Alu 38 264 -48 1905 112 126 36 chr2 194610177 194610542 -58646041 - LTR14B LTR ERVK 0 608 211 277 83 0 42 chr2 194610530 194610578 -58646005 - LTR14B LTR ERVK -562 46 1 * 2754 96 22 69 chr2 194610949 194611332 -58645251 + MLT2A1 LTR ERVL 1 361 -83 941 140 6 0 chr2 194611332 194611496 -58645087 + (TA)n Simple_repeat Simple_repeat 2 166 0 2754 96 22 69 chr2 194611496 194611562 -58645021 + MLT2A1 LTR ERVL 361 429 -15 888 272 44 20 chr2 194612316 194612566 -58644017 + MIR SINE MIR 2 257 -5 1960 119 0 14 chr2 194612802 194612929 -58643654 + AluSq SINE Alu 10 137 -176 2206 120 3 0 chr2 194612929 194613228 -58643355 + AluSp SINE Alu 1 300 -13 1960 119 0 14 chr2 194613228 194613378 -58643205 + AluSq SINE Alu 137 283 -30 222 62 0 0 chr2 194613381 194613413 -58643170 + (CATA)n Simple_repeat Simple_repeat 2 33 0 1005 179 6 0 chr2 194613694 194613867 -58642716 - L1MB1 LINE L1 -239 5950 5777 369 0 0 0 chr2 194614556 194614597 -58641986 + (TG)n Simple_repeat Simple_repeat 2 42 0 1542 184 7 40 chr2 194615217 194615521 -58641062 - AluJo SINE Alu -18 294 1 565 262 114 24 chr2 194615540 194615750 -58640833 - LTR16C LTR ERVL 0 491 263 595 240 60 11 chr2 194616184 194616367 -58640216 + LTR33 LTR ERVL 306 497 -24 533 222 15 37 chr2 194617698 194617833 -58638750 + MER94 DNA DNA 2 133 -1 192 268 127 14 chr2 194617833 194617904 -58638679 + L2 LINE L2 2267 2345 -969 603 306 91 61 chr2 194617959 194618459 -58638124 + L2 LINE L2 2364 2912 -360 1759 225 44 24 chr2 194618459 194618913 -58637670 - MLT1C LTR MaLR -2 465 3 603 306 91 61 chr2 194618913 194619061 -58637522 + L2 LINE L2 2912 3054 -218 1496 161 58 38 chr2 194619171 194619462 -58637121 - AluY SINE Alu -14 297 1 222 272 99 62 chr2 194619464 194619545 -58637038 + L2 LINE L2 3188 3271 -1 1521 175 270 34 chr2 194619911 194620070 -58636513 - LTR29 LTR ERV1 0 622 502 2297 64 6 54 chr2 194620070 194620384 -58636199 - AluY SINE Alu -12 299 1 1521 175 270 34 chr2 194620384 194620727 -58635856 - LTR29 LTR ERV1 -120 502 1 1956 259 55 21 chr2 194620748 194621278 -58635305 + MER77 LTR ERV1 54 601 -4 5477 147 24 13 chr2 194621428 194622595 -58633988 - L1PA16 LINE L1 -1 6165 4994 242 266 21 32 chr2 194622589 194622683 -58633900 - L1P LINE L1 -2528 3618 3526 * 637 125 18 0 chr2 194622718 194622830 -58633753 - L1MA3 LINE L1 -96 6209 6096 * 806 161 88 21 chr2 194622822 194623014 -58633569 - L1MA9 LINE L1 -291 6021 5817 5540 156 40 3 chr2 194623026 194624035 -58632548 - L1MA3 LINE L1 -1 7723 6678 455 100 67 8 chr2 194624036 194624282 -58632301 + (TA)n Simple_repeat Simple_repeat 1 260 0 1974 223 30 2 chr2 194624284 194624751 -58631832 - L1MA3 LINE L1 -870 6695 6216 2022 161 97 5 chr2 194624752 194625132 -58631451 - MSTA LTR MaLR 0 428 14 1656 160 68 0 chr2 194625138 194625294 -58631289 - MSTA-int LTR MaLR -4 1647 1503 354 98 0 0 chr2 194625294 194625345 -58631238 + (CAA)n Simple_repeat Simple_repeat 2 52 0 1656 160 68 0 chr2 194625345 194625482 -58631101 - MSTA-int LTR MaLR -148 1503 1334 43270 46 3 1 chr2 194625491 194631632 -58624951 - L1PA4 LINE L1 -3 6152 2 6569 174 97 3 chr2 194631635 194632868 -58623715 - MSTA-int LTR MaLR -303 1348 1 2034 161 91 15 chr2 194632868 194633266 -58623317 - MSTA LTR MaLR 0 428 1 6328 180 23 5 chr2 194633266 194634544 -58622039 - L1MA3 LINE L1 -1346 6219 4919 2770 16 0 0 chr2 194634544 194634848 -58621735 - AluYa5 SINE Alu -7 304 1 1307 162 0 0 chr2 194634868 194635072 -58621511 - AluSg/x SINE Alu -2 310 107 5711 180 31 16 chr2 194635079 194635769 -58620814 - L1MA3 LINE L1 -2667 4898 4220 2219 123 0 0 chr2 194635769 194636077 -58620506 - AluSc SINE Alu -1 308 1 5711 180 31 16 chr2 194636077 194637620 -58618963 - L1MA3 LINE L1 -3345 4220 2624 9166 182 25 4 chr2 194637626 194639220 -58617363 - L1MA3 LINE L1 -5925 1640 14 429 178 1 0 chr2 194639225 194639320 -58617263 - L1 LINE L1 -2634 3512 3417 1270 280 67 28 chr2 194640992 194641424 -58615159 + LTR16B LTR ERVL 1 449 -15 335 326 0 0 chr2 194641511 194641606 -58614977 + LTR16B LTR ERVL 1 95 -369 190 146 18 18 chr2 194643128 194643183 -58613400 + (TCTA)n Simple_repeat Simple_repeat 2 56 0 469 338 68 5 chr2 194643233 194643440 -58613143 - MIR SINE MIR 0 262 43 462 18 0 0 chr2 194643852 194643907 -58612676 + (CA)n Simple_repeat Simple_repeat 1 55 0 268 220 0 17 chr2 194645835 194645894 -58610689 + CT-rich Low_complexity Low_complexity 2 59 0 23 68 0 0 chr2 194645894 194645938 -58610645 + AT_rich Low_complexity Low_complexity 1 44 0 2570 93 25 3 chr2 194646654 194647021 -58609562 + THE1C LTR MaLR 1 375 0 771 177 0 0 chr2 194647634 194647764 -58608819 + L1PA14 LINE L1 6027 6156 -5 546 91 0 0 chr2 194648382 194648459 -58608124 + (TG)n Simple_repeat Simple_repeat 2 78 0 4453 169 27 50 chr2 194649653 194650537 -58606046 + L1MC1 LINE L1 20 883 -5543 266 157 0 0 chr2 194650543 194650594 -58605989 + L1MC1 LINE L1 975 1025 -5401 2060 153 58 27 chr2 194650594 194651126 -58605457 + MLT2A2 LTR ERVL 1 554 0 5724 214 29 17 chr2 194651131 194653692 -58602891 + L1MC1 LINE L1 1053 6613 0 218 320 62 0 chr2 194654358 194654455 -58602128 + L2 LINE L2 3169 3271 -1 1758 171 77 6 chr2 194654494 194654844 -58601739 + THE1C LTR MaLR 1 375 0 209 176 20 20 chr2 194655424 194655475 -58601108 + (TTATA)n Simple_repeat Simple_repeat 5 55 0 278 343 22 30 chr2 194656496 194656630 -58599953 + MIR3 SINE MIR 7 139 -69 299 308 38 63 chr2 194656642 194656801 -58599782 - L2 LINE L2 -1 3312 3158 180 369 8 85 chr2 194656887 194657017 -58599566 - L2 LINE L2 -224 3048 2929 8274 206 41 19 chr2 194657208 194659061 -58597522 - L1 LINE L1 -743 6822 4929 3802 216 29 34 chr2 194659043 194660093 -58596490 - L1 LINE L1 -3042 4523 3483 * 684 245 8 38 chr2 194660073 194660240 -58596343 - L1M4 LINE L1 -834 5312 5153 * 1272 239 122 6 chr2 194660240 194660567 -58596016 - MLT1A1 LTR MaLR 0 365 1 684 245 8 38 chr2 194660567 194660636 -58595947 - L1M4 LINE L1 -993 5153 5083 1288 224 45 6 chr2 194660649 194660979 -58595604 - L1M4 LINE L1 -1243 4903 4561 412 252 124 51 chr2 194663279 194663748 -58592835 - HAL1 LINE L1 -3 2504 2002 331 307 50 45 chr2 194666017 194666196 -58590387 - MER117 DNA MER1_type 0 197 18 29 0 0 0 chr2 194667941 194667970 -58588613 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr2 194669351 194669374 -58587209 + AT_rich Low_complexity Low_complexity 1 23 0 1865 119 22 148 chr2 194670060 194670285 -58586298 - LTR45B LTR ERV1 -98 391 139 1636 182 7 26 chr2 194670285 194670593 -58585990 - AluJb SINE Alu -10 302 1 1865 119 22 148 chr2 194670593 194670647 -58585936 - LTR45B LTR ERV1 -350 139 80 1741 179 3 13 chr2 194670647 194670672 -58585911 - AluSx SINE Alu -4 308 284 1099 102 11 6 chr2 194670672 194670849 -58585734 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 1741 179 3 13 chr2 194670849 194671130 -58585453 - AluSx SINE Alu -28 284 5 1865 119 22 148 chr2 194671130 194671294 -58585289 - LTR45B LTR ERV1 -409 80 3 254 264 69 0 chr2 194672487 194672559 -58584024 - L2 LINE L2 0 3313 3237 218 140 0 40 chr2 194673003 194673053 -58583530 + (CA)n Simple_repeat Simple_repeat 2 49 0 4661 188 31 12 chr2 194673818 194675093 -58581490 - L1MB3 LINE L1 -7 6412 5125 4012 155 4 36 chr2 194675098 194675813 -58580770 + L1P LINE L1 142 833 -5313 2583 204 32 37 chr2 194675805 194675988 -58580595 - L1MB3 LINE L1 -3166 3216 3034 * 1487 55 0 15 chr2 194675988 194676188 -58580395 - L1PA5 LINE L1 -1 6153 5957 2583 204 32 37 chr2 194676188 194677309 -58579274 - L1MB3 LINE L1 -3348 3034 1920 2424 189 43 4 chr2 194677314 194677875 -58578708 - L1MB3 LINE L1 -5145 1239 657 1642 118 15 97 chr2 194677863 194678192 -58578391 - THE1C-int LTR MaLR -1278 302 1 * 2407 110 19 19 chr2 194678192 194678565 -58578018 - THE1C LTR MaLR 0 375 3 1892 135 7 3 chr2 194679266 194679548 -58577035 - AluSq SINE Alu -30 283 1 235 250 17 17 chr2 194679731 194679851 -58576732 + (TA)n Simple_repeat Simple_repeat 1 120 0 226 239 15 30 chr2 194679858 194679925 -58576658 + GA-rich Low_complexity Low_complexity 1 66 0 1414 147 60 66 chr2 194680047 194680185 -58576398 - L1MA10 LINE L1 -1 6333 6196 2009 121 7 0 chr2 194680185 194680466 -58576117 + AluSq SINE Alu 1 283 -30 1414 147 60 66 chr2 194680466 194680675 -58575908 - L1MA10 LINE L1 -138 6196 5988 13802 76 28 6 chr2 194730675 194732541 -58524042 - HERVL LTR ERVL -229 5425 3519 12528 29 5 2 chr2 194732825 194734806 -58521777 - L1PA4 LINE L1 -254 5901 3919 345 24 0 0 chr2 194734906 194734948 -58521635 + (CA)n Simple_repeat Simple_repeat 1 42 0 249 252 58 90 chr2 194736031 194736186 -58520397 - L2 LINE L2 0 3313 3164 228 67 0 0 chr2 194736220 194736250 -58520333 + (TA)n Simple_repeat Simple_repeat 1 30 0 24 32 0 0 chr2 194736423 194736454 -58520129 + GC_rich Low_complexity Low_complexity 1 31 0 21 57 0 0 chr2 194737476 194737511 -58519072 + AT_rich Low_complexity Low_complexity 1 35 0 1081 65 7 0 chr2 194738400 194738539 -58518044 - L1MA4A LINE L1 -5 6298 6159 28 29 0 0 chr2 194738560 194738595 -58517988 + AT_rich Low_complexity Low_complexity 1 35 0 241 180 0 0 chr2 194738595 194738645 -58517938 - Charlie5 DNA MER1_type -140 2472 2423 1950 123 35 0 chr2 194738697 194738981 -58517602 - L1PA15 LINE L1 -7 6158 5865 4476 201 13 26 chr2 194739947 194740803 -58515780 + MER21B LTR ERV1 1 845 -18 2163 129 26 59 chr2 194740882 194741270 -58515313 + THE1C LTR MaLR 1 375 0 935 155 7 7 chr2 194741746 194741901 -58514682 + L1MB1 LINE L1 6011 6165 -3 256 333 19 9 chr2 194741948 194742053 -58514530 + MARNA DNA Mariner 430 535 -51 1269 137 0 0 chr2 194742069 194742252 -58514331 - Tigger3(Golem) DNA MER2_type 0 3038 2856 714 266 43 11 chr2 194743200 194743461 -58513122 - L1MD3 LINE L1 -9 7986 6098 2732 112 8 8 chr2 194744305 194744680 -58511903 - THE1C LTR MaLR 0 375 1 1548 138 0 0 chr2 194744743 194744961 -58511622 + AluSx SINE Alu 1 218 -94 2508 130 53 0 chr2 194744961 194745300 -58511283 + LTR18A LTR ERVL 1 357 0 20486 183 8 5 chr2 194745314 194748711 -58507872 + HERVL18 LTR ERVL 9 3416 -2631 434 189 0 14 chr2 194748710 194748784 -58507799 - HERVL18 LTR ERVL -3345 2702 2630 * 2604 110 6 3 chr2 194748789 194749145 -58507438 + HERVL18 LTR ERVL 3415 3771 -2276 3893 142 61 20 chr2 194749246 194749975 -58506608 + MER4D LTR ERV1 150 664 0 969 192 22 59 chr2 194749975 194750244 -58506339 + MER63 DNA MER1_type 789 1047 -14 438 205 50 140 chr2 194750340 194750459 -58506124 + MER5A DNA MER1_type 7 102 -87 3793 122 50 14 chr2 194750459 194751033 -58505550 - LTR49 LTR ERV1 0 595 1 438 205 50 140 chr2 194751033 194751113 -58505470 + MER5A DNA MER1_type 102 188 -1 327 314 90 16 chr2 194751735 194751923 -58504660 - MER34 LTR ERV1 0 542 341 2261 104 0 13 chr2 194751986 194752293 -58504290 + AluSp SINE Alu 1 303 -10 18642 174 17 14 chr2 194752316 194755635 -58500948 + L1M1 LINE L1 19 3347 -4218 17978 58 2 3 chr2 194755637 194758589 -58497994 + L1P LINE L1 1 3163 -2983 11601 162 22 11 chr2 194758738 194760654 -58495929 + HERVL18 LTR ERVL 4077 6014 -33 399 166 0 25 chr2 194760660 194760688 -58495895 + AluSg/x SINE Alu 214 214 -88 2124 144 56 3 chr2 194760688 194761027 -58495556 + LTR18A LTR ERVL 1 357 0 399 166 0 25 chr2 194761027 194761081 -58495502 + AluSg/x SINE Alu 213 267 -35 877 200 6 11 chr2 194762294 194762469 -58494114 - MER5B DNA MER1_type -2 176 3 1253 238 119 10 chr2 194762563 194762966 -58493617 - LTR2 LTR ERV1 0 449 3 1314 31 12 0 chr2 194763031 194763191 -58493392 + L1PA4 LINE L1 5992 6153 -2 435 162 81 50 chr2 194763208 194763307 -58493276 + L1MB3 LINE L1 5738 5839 -344 22 35 0 0 chr2 194764867 194764896 -58491687 + AT_rich Low_complexity Low_complexity 1 29 0 293 373 57 0 chr2 194765099 194765292 -58491291 - MIR SINE MIR -6 256 53 2055 129 50 19 chr2 194765964 194766328 -58490255 + THE1C LTR MaLR 1 375 0 1907 239 56 19 chr2 194767104 194767622 -58488961 + MLT1F LTR MaLR 1 537 -5 429 333 42 18 chr2 194768157 194768322 -58488261 + L2 LINE L2 3104 3272 0 1777 167 17 3 chr2 194769012 194769311 -58487272 + AluJo SINE Alu 1 303 -9 546 319 28 20 chr2 194769975 194770226 -58486357 + L1MEc LINE L1 37 289 -6107 * 1313 209 72 21 chr2 194770224 194770612 -58485971 + L1M4 LINE L1 4616 5023 -1123 738 250 28 4 chr2 194770610 194770858 -58485725 - L1M4 LINE L1 -850 5296 5043 * 1792 141 3 24 chr2 194771498 194771788 -58484795 + AluSx SINE Alu 1 284 -28 7605 51 2 1 chr2 194771888 194772868 -58483715 - L1P LINE L1 -2211 3935 2955 2704 206 8 28 chr2 194772866 194773638 -58482945 - L1MB5 LINE L1 -294 5880 5128 * 22 0 0 0 chr2 194773654 194773676 -58482907 + AT_rich Low_complexity Low_complexity 1 22 0 680 299 40 90 chr2 194774115 194774584 -58481999 + MLT1J LTR MaLR 52 497 -14 6070 19 0 1 chr2 194775642 194776895 -58479688 - L1PA2 LINE L1 -195 5960 4708 1550 42 0 0 chr2 194776895 194777085 -58479498 + L1PA2 LINE L1 5961 6151 -4 290 349 70 0 chr2 194777333 194777462 -58479121 + MIR3 SINE MIR 44 181 -27 2201 171 20 47 chr2 194777746 194778256 -58478327 - L1MB1 LINE L1 -3 6165 5670 562 251 16 33 chr2 194778264 194778447 -58478136 + L1 LINE L1 4618 4797 -1349 4808 289 139 31 chr2 194778915 194781326 -58475257 + L2 LINE L2 640 3313 0 220 269 0 0 chr2 194781382 194781434 -58475149 - MIR3 SINE MIR -1 207 156 374 318 31 8 chr2 194781655 194781784 -58474799 - MIR3 SINE MIR -62 146 15 187 308 55 11 chr2 194783024 194783115 -58473468 + MIR SINE MIR 162 256 -6 511 275 30 0 chr2 194783189 194783320 -58473263 - L2 LINE L2 0 3313 3179 3101 125 11 2 chr2 194783483 194783932 -58472651 - MLT2A2 LTR ERVL 0 453 1 713 43 11 0 chr2 194783932 194784024 -58472559 - HERVL-A2 LTR ERVL 0 5654 5562 17013 49 6 2 chr2 194784163 194787164 -58469419 + L1PA4 LINE L1 3168 6153 -2 21 0 0 0 chr2 194787234 194787255 -58469328 + AT_rich Low_complexity Low_complexity 1 21 0 14148 166 16 33 chr2 194787255 194788262 -58468321 + L1MA1 LINE L1 3330 4353 -3368 6845 33 27 1 chr2 194788262 194789088 -58467495 + L1PA5 LINE L1 5282 6150 -4 14148 166 16 33 chr2 194789088 194789101 -58467482 + L1MA1 LINE L1 4353 4365 -3356 1737 100 0 25 chr2 194789101 194789340 -58467243 + AluY SINE Alu 71 303 -8 14148 166 16 33 chr2 194789340 194790794 -58465789 + L1MA1 LINE L1 4365 5843 -1878 2191 103 10 6 chr2 194790794 194791106 -58465477 - AluSq SINE Alu 0 313 1 14148 166 16 33 chr2 194791106 194792469 -58464114 + L1MA1 LINE L1 5843 7080 -641 1956 119 7 0 chr2 194792469 194792738 -58463845 + AluSg SINE Alu 1 271 -39 14148 166 16 33 chr2 194792738 194793363 -58463220 + L1MA1 LINE L1 7080 7714 -7 487 241 32 61 chr2 194793915 194794219 -58462364 + MER39 LTR ERV1 1 483 -224 2237 188 75 11 chr2 194794220 194794832 -58461751 + MER39 LTR ERV1 1 530 -12 528 191 156 35 chr2 194794826 194794999 -58461584 + MER39 LTR ERV1 487 680 -27 * 293 277 12 12 chr2 194795430 194795513 -58461070 + L2 LINE L2 3228 3310 -3 1087 241 85 19 chr2 194795961 194796326 -58460257 + MER67C LTR ERV1 1 389 -321 650 213 0 15 chr2 194796323 194796459 -58460124 + MER67C LTR ERV1 498 631 -79 * 3080 136 30 2 chr2 194796459 194796968 -58459615 - LTR45 LTR ERV1 -2 523 1 22 0 0 0 chr2 194797049 194797071 -58459512 + AT_rich Low_complexity Low_complexity 1 22 0 1181 187 42 103 chr2 194797713 194797754 -58458829 + MER67D LTR ERV1 1 43 -471 2379 78 3 0 chr2 194797754 194798049 -58458534 - AluSp SINE Alu -16 297 2 1181 187 42 103 chr2 194798049 194798338 -58458245 + MER67D LTR ERV1 43 311 -203 590 209 77 66 chr2 194798401 194798597 -58457986 + MER67D LTR ERV1 316 513 -1 355 221 16 16 chr2 194798696 194798818 -58457765 + (TA)n Simple_repeat Simple_repeat 1 122 0 26 50 0 0 chr2 194799174 194799214 -58457369 + AT_rich Low_complexity Low_complexity 1 40 0 504 329 65 38 chr2 194799779 194800150 -58456433 + L2 LINE L2 2933 3313 0 186 346 0 0 chr2 194800169 194800221 -58456362 + MIR SINE MIR 46 97 -165 36 0 0 0 chr2 194800232 194800268 -58456315 + AT_rich Low_complexity Low_complexity 1 36 0 31 26 0 0 chr2 194800636 194800674 -58455909 + AT_rich Low_complexity Low_complexity 1 38 0 1373 43 6 0 chr2 194800815 194800978 -58455605 - HERVL-A2 LTR ERVL -2200 3454 3291 * 20073 74 14 5 chr2 194800977 194803590 -58452993 - HERVL-A2 LTR ERVL -3017 2637 1 3110 78 12 76 chr2 194803590 194804074 -58452509 - MLT2A2 LTR ERVL 0 453 1 2216 90 7 7 chr2 194804410 194804710 -58451873 + AluSc SINE Alu 3 302 -7 401 258 215 16 chr2 194804757 194804943 -58451640 + MLT1F LTR MaLR 200 422 -120 270 0 0 0 chr2 194805587 194805617 -58450966 + (CAAAA)n Simple_repeat Simple_repeat 5 34 0 237 204 56 37 chr2 194805617 194805671 -58450912 + MIR SINE MIR 91 145 -63 536 271 32 7 chr2 194805791 194805946 -58450637 - MIR SINE MIR -70 192 34 1598 194 99 60 chr2 194807014 194807115 -58449468 + L1MD3 LINE L1 6932 7028 -967 189 0 0 0 chr2 194807115 194807136 -58449447 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 1598 194 99 60 chr2 194807136 194807445 -58449138 + L1MD3 LINE L1 7028 7323 -672 1703 174 3 7 chr2 194807445 194807727 -58448856 + AluJo SINE Alu 1 301 0 181 0 0 0 chr2 194807727 194807747 -58448836 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 1598 194 99 60 chr2 194807747 194807838 -58448745 + L1MD3 LINE L1 7323 7409 -586 4363 149 29 13 chr2 194807838 194808634 -58447949 + L1MA7 LINE L1 5483 6291 0 1598 194 99 60 chr2 194808634 194808967 -58447616 + L1MD3 LINE L1 7409 7989 -6 2704 181 20 21 chr2 194808984 194809543 -58447040 + L1MB5 LINE L1 5617 6174 0 337 308 158 44 chr2 194809741 194810014 -58446569 + L1MEd LINE L1 845 1148 -4971 279 336 118 11 chr2 194810118 194810389 -58446194 + L1MEd LINE L1 1318 1617 -4693 306 247 146 38 chr2 194810641 194810799 -58445784 + L1MEd LINE L1 2115 2289 -3840 267 280 45 45 chr2 194810929 194811061 -58445522 - MLT1J2 LTR MaLR -53 397 266 242 185 77 0 chr2 194811087 194811152 -58445431 - MLT1J2 LTR MaLR -312 138 69 1109 164 77 0 chr2 194811599 194811819 -58444764 - MLT1E1 LTR MaLR 0 654 418 26 30 0 0 chr2 194811851 194811884 -58444699 + AT_rich Low_complexity Low_complexity 1 33 0 779 208 83 29 chr2 194811890 194812110 -58444473 - MLT1E1 LTR MaLR -356 237 1 623 251 129 30 chr2 194812197 194812468 -58444115 - LTR16C LTR ERVL 0 491 194 446 270 71 61 chr2 194812681 194813048 -58443535 - MLT1J1 LTR MaLR 0 446 20 221 330 21 72 chr2 194813077 194813158 -58443425 - L2 LINE L2 -193 3079 2995 1986 197 93 37 chr2 194813158 194813650 -58442933 + MLT2B1 LTR ERVL 1 520 0 221 330 21 72 chr2 194813650 194813762 -58442821 - L2 LINE L2 -277 2995 2896 310 250 80 0 chr2 194814087 194814175 -58442408 + MIR SINE MIR 150 244 -18 533 215 12 99 chr2 194815042 194815214 -58441369 + MER5B DNA MER1_type 4 160 -18 207 308 9 65 chr2 194815223 194815330 -58441253 + L2 LINE L2 2557 2657 -657 390 292 0 0 chr2 194815411 194815500 -58441083 - MER5A DNA MER1_type -85 104 16 1652 35 5 0 chr2 194815801 194816004 -58440579 + L1PA5 LINE L1 5940 6143 -11 22 35 0 0 chr2 194816073 194816102 -58440481 + AT_rich Low_complexity Low_complexity 1 29 0 7951 179 47 10 chr2 194816269 194818353 -58438230 - L1PA13 LINE L1 -306 5857 3590 518 311 41 8 chr2 194818354 194818598 -58437985 - L1MB8 LINE L1 -6 6172 5921 2185 247 36 32 chr2 194819169 194819865 -58436718 + L1ME2 LINE L1 5454 6152 -12 1928 173 36 0 chr2 194819957 194820292 -58436291 + MER7A DNA MER2_type 2 346 0 1134 244 71 47 chr2 194820520 194821030 -58435553 - MER34B LTR ERV1 -2 563 1 275 234 43 64 chr2 194821902 194821996 -58434587 + MLT1J LTR MaLR 89 180 -331 1957 136 19 19 chr2 194822134 194822444 -58434139 - AluJb SINE Alu 0 312 3 2137 126 0 0 chr2 194822933 194823235 -58433348 + AluSx SINE Alu 1 302 -10 2262 105 0 3 chr2 194823932 194824237 -58432346 + AluSq SINE Alu 1 304 -9 305 309 66 26 chr2 194824425 194824577 -58432006 + MER5A DNA MER1_type 30 187 -2 622 284 103 13 chr2 194826378 194826610 -58429973 - MIR SINE MIR 0 262 10 1601 212 0 0 chr2 194827616 194827913 -58428670 + AluJb SINE Alu 13 309 -3 299 323 53 0 chr2 194828593 194828726 -58427857 + HAL1 LINE L1 1 140 -2367 1380 283 116 29 chr2 194828792 194829700 -58426883 + HAL1 LINE L1 1404 2390 -117 472 253 175 42 chr2 194829816 194830148 -58426435 + L1ME4a LINE L1 4468 4843 -1303 576 295 58 68 chr2 194830164 194830561 -58426022 + LTR16A1 LTR ERVL 65 457 0 2413 127 5 22 chr2 194830824 194831194 -58425389 + THE1B LTR MaLR 1 364 0 11171 108 8 0 chr2 194831194 194832762 -58423821 + THE1B-int LTR MaLR 1 1580 0 1746 120 117 36 chr2 194832762 194833096 -58423487 + THE1B LTR MaLR 1 361 -3 376 260 189 21 chr2 194833215 194833496 -58423087 + L1ME4a LINE L1 5791 6118 -3 387 247 65 45 chr2 194834201 194834355 -58422228 - MIR3 SINE MIR -28 180 24 322 253 129 61 chr2 194835229 194835416 -58421167 + HAL1b LINE L1 819 992 -356 1289 234 21 7 chr2 194835416 194835706 -58420877 + AluJo SINE Alu 1 294 -18 322 253 129 61 chr2 194835706 194835759 -58420824 + HAL1b LINE L1 992 1040 -308 2199 119 0 3 chr2 194835759 194836071 -58420512 - AluSx SINE Alu -1 311 1 322 253 129 61 chr2 194836071 194836287 -58420296 + HAL1b LINE L1 1040 1307 -41 297 0 0 0 chr2 194836543 194836576 -58420007 + (CA)n Simple_repeat Simple_repeat 1 33 0 471 282 129 0 chr2 194836982 194837152 -58419431 + MIR SINE MIR 46 237 -25 823 181 0 0 chr2 194837729 194837862 -58418721 + FRAM SINE Alu 20 152 -24 23 0 0 0 chr2 194837862 194837885 -58418698 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 194837896 194837917 -58418666 + AT_rich Low_complexity Low_complexity 1 21 0 281 339 17 17 chr2 194837989 194838104 -58418479 + MIR SINE MIR 38 152 -56 227 369 48 0 chr2 194838714 194838798 -58417785 - L2 LINE L2 -48 3224 3137 258 170 0 38 chr2 194838897 194838950 -58417633 + L2 LINE L2 3256 3306 -7 182 301 118 73 chr2 194839151 194839287 -58417296 - L2 LINE L2 -570 2744 2603 2022 151 26 20 chr2 194839488 194839840 -58416743 + MLT1A1 LTR MaLR 12 365 0 233 376 98 16 chr2 194839860 194840238 -58416345 - L2 LINE L2 -967 2347 1939 26 0 0 0 chr2 194840454 194840480 -58416103 + AT_rich Low_complexity Low_complexity 1 26 0 1742 191 18 6 chr2 194842015 194842344 -58414239 + MER44D DNA MER2_type 7 609 0 993 319 74 16 chr2 194842673 194843162 -58413421 + L2 LINE L2 1818 2334 -980 253 254 0 0 chr2 194844143 194844198 -58412385 - MLT2E LTR ERVL -542 86 32 21 0 0 0 chr2 194844752 194844773 -58411810 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 194845547 194845576 -58411007 + AT_rich Low_complexity Low_complexity 1 29 0 23 68 0 0 chr2 194846987 194847031 -58409552 + AT_rich Low_complexity Low_complexity 1 44 0 262 267 267 0 chr2 194847219 194847305 -58409278 - MER5A DNA MER1_type 0 189 81 378 311 0 0 chr2 194847323 194847413 -58409170 + MER5A DNA MER1_type 11 100 -89 272 255 113 9 chr2 194847674 194847780 -58408803 + L1MC5 LINE L1 7808 7924 -37 1383 233 112 3 chr2 194847816 194848147 -58408436 - MLT1F LTR MaLR -77 465 99 197 283 0 0 chr2 194848178 194848224 -58408359 - L2 LINE L2 -639 2675 2630 274 197 124 10 chr2 194848321 194848418 -58408165 - MLT1I LTR MaLR -9 441 286 561 219 126 44 chr2 194848458 194848641 -58407942 - MLT1J1 LTR MaLR -245 201 4 255 328 153 15 chr2 194848641 194848772 -58407811 - MIR3 SINE MIR -39 169 21 929 223 22 5 chr2 194848872 194849056 -58407527 - MLT1A1 LTR MaLR -2 363 177 8551 31 0 3 chr2 194849058 194850869 -58405714 + L1PA4 LINE L1 4342 6155 0 566 267 104 12 chr2 194850906 194851157 -58405426 + L1MC4 LINE L1 7768 8041 -1 28 0 0 0 chr2 194851157 194851185 -58405398 + AT_rich Low_complexity Low_complexity 1 28 0 971 176 6 11 chr2 194851185 194851361 -58405222 - MLT1A1 LTR MaLR -190 175 1 2078 153 11 11 chr2 194853308 194853673 -58402910 + MER47A DNA MER2_type 2 366 0 7750 26 3 1 chr2 194853709 194854604 -58401979 + MER11D LTR ERVK 1 897 0 2117 127 0 10 chr2 194854803 194855111 -58401472 + AluSx SINE Alu 1 305 -7 21 0 0 0 chr2 194855956 194855977 -58400606 + AT_rich Low_complexity Low_complexity 1 21 0 1003 134 0 0 chr2 194856895 194857037 -58399546 - AluSg/x SINE Alu -16 296 155 1459 117 0 5 chr2 194857038 194857244 -58399339 - AluSx SINE Alu -107 205 1 2868 171 61 22 chr2 194859320 194859912 -58396671 + L1MB1 LINE L1 5372 5986 -182 1982 126 7 3 chr2 194860255 194860556 -58396027 - AluSx SINE Alu -10 302 1 579 322 99 31 chr2 194860605 194861151 -58395432 + HAL1b LINE L1 261 843 -505 1880 251 31 22 chr2 194861499 194862009 -58394574 + LTR40a LTR ERVL 1 515 -4 257 295 32 11 chr2 194862253 194862348 -58394235 + MLT1H LTR MaLR 66 162 -387 475 240 114 11 chr2 194862987 194863162 -58393421 + L1MC4a LINE L1 5294 5486 -2322 1254 102 24 5 chr2 194863212 194863417 -58393166 + L1MA9 LINE L1 6104 6312 0 305 227 204 45 chr2 194863431 194863563 -58393020 + L1MC4a LINE L1 5939 6091 -1717 1619 178 15 40 chr2 194863565 194863891 -58392692 - THE1B LTR MaLR 0 364 47 9328 143 9 35 chr2 194863907 194865525 -58391058 - THE1C-int LTR MaLR 0 1580 4 1784 144 57 31 chr2 194865528 194865882 -58390701 - THE1C LTR MaLR -12 363 1 1586 149 14 11 chr2 194865942 194866218 -58390365 + L1MB2 LINE L1 5826 6102 -69 322 143 26 52 chr2 194866276 194866353 -58390230 + L1MB2 LINE L1 6089 6163 -8 26 0 0 0 chr2 194866383 194866409 -58390174 + AT_rich Low_complexity Low_complexity 1 26 0 183 42 0 0 chr2 194866734 194866758 -58389825 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1007 188 0 0 chr2 194867590 194867750 -58388833 + FRAM SINE Alu 1 154 -22 6695 220 15 27 chr2 194867786 194869534 -58387049 + L1P LINE L1 2435 4162 -1984 5499 199 18 6 chr2 194869706 194871875 -58384708 + L1PA15 LINE L1 4018 6164 -1 409 241 66 0 chr2 194871884 194872050 -58384533 + Charlie2 DNA MER1_type 1909 2085 -777 5223 212 73 16 chr2 194872620 194873995 -58382588 - Charlie1a DNA MER1_type 0 1455 3 1739 127 39 15 chr2 194874056 194874315 -58382268 - AluSq SINE Alu -48 265 1 1140 142 38 50 chr2 194874431 194874671 -58381912 - L1MB5 LINE L1 -10 6164 5928 2016 150 7 0 chr2 194874981 194875287 -58381296 + AluSx SINE Alu 1 308 -4 1028 295 67 6 chr2 194876034 194876393 -58380190 - LTR16C LTR ERVL -27 464 84 292 98 176 0 chr2 194876603 194876654 -58379929 + LTR33A LTR ERVL 444 503 -20 206 339 113 53 chr2 194876825 194877338 -58379245 - L2 LINE L2 -938 2376 1833 371 256 22 78 chr2 194878095 194878275 -58378308 - MER112 DNA MER1_type -11 249 80 1557 175 53 11 chr2 194878638 194878923 -58377660 + AluJo SINE Alu 2 298 -14 1937 116 72 3 chr2 194878989 194879281 -58377302 - AluSx SINE Alu 0 312 1 359 377 121 31 chr2 194879588 194880143 -58376440 + L2 LINE L2 2202 2806 -508 21 57 0 0 chr2 194880577 194880612 -58375971 + AT_rich Low_complexity Low_complexity 1 35 0 297 281 24 24 chr2 194880709 194880791 -58375792 + L2 LINE L2 3228 3309 -4 1385 192 13 45 chr2 194881292 194881600 -58374983 + AluJb SINE Alu 1 298 -14 2611 197 92 12 chr2 194882433 194883011 -58373572 + MLT1E3 LTR MaLR 1 624 0 21 0 0 0 chr2 194883434 194883455 -58373128 + AT_rich Low_complexity Low_complexity 1 21 0 6559 81 17 1 chr2 194885238 194886204 -58370379 + L1PA14 LINE L1 5170 6159 -2 1147 162 102 36 chr2 194886226 194886529 -58370054 + MER33 DNA MER1_type 2 324 0 1287 175 140 14 chr2 194886650 194886936 -58369647 + MLT1E1 LTR MaLR 42 363 -291 3674 136 7 0 chr2 194888605 194889178 -58367405 + L1PB3 LINE L1 5578 6154 0 904 203 58 10 chr2 194889375 194889582 -58367001 + MLT2C1 LTR ERVL 179 395 -2 2638 128 23 37 chr2 194889797 194890227 -58366356 + MSTC LTR MaLR 1 424 -4 1238 236 121 22 chr2 194890695 194891059 -58365524 + MER63B DNA MER1_type 18 417 -19 1352 149 63 103 chr2 194891214 194891563 -58365020 + MLT1A1 LTR MaLR 30 364 -1 1175 142 30 82 chr2 194891718 194892049 -58364534 - Charlie1 DNA MER1_type 0 2761 2448 882 227 26 73 chr2 194892063 194892221 -58364362 + MLT1E1 LTR MaLR 334 475 -118 2247 104 0 13 chr2 194892221 194892528 -58364055 - AluY SINE Alu 0 311 9 882 227 26 73 chr2 194892528 194892642 -58363941 + MLT1E1 LTR MaLR 475 593 0 250 355 78 69 chr2 194892665 194892882 -58363701 - L2 LINE L2 0 3272 3054 218 297 195 31 chr2 194893658 194893786 -58362797 + MIR SINE MIR 12 160 -102 22 0 0 0 chr2 194894605 194894627 -58361956 + AT_rich Low_complexity Low_complexity 1 22 0 381 175 4 42 chr2 194895442 194895551 -58361032 - MLT1F LTR MaLR 0 542 406 4772 165 6 9 chr2 194895553 194896153 -58360430 + L1PA14 LINE L1 4452 5050 -1096 2074 130 61 9 chr2 194896153 194896498 -58360085 - THE1B LTR MaLR -1 363 1 4772 165 6 9 chr2 194896498 194896781 -58359802 + L1PA14 LINE L1 5050 5332 -814 6494 62 32 46 chr2 194896781 194898753 -58357830 + SVA Other Other 9 1374 -12 2375 105 21 8 chr2 194898866 194899246 -58357337 + SVA Other Other 998 1382 -4 5265 134 13 0 chr2 194899302 194900131 -58356452 + L1PA14 LINE L1 5317 6156 -5 2096 128 0 0 chr2 194900142 194900431 -58356152 + AluSq SINE Alu 1 289 -24 1383 195 5 146 chr2 194900456 194900534 -58356049 - MLT1F1 LTR MaLR -39 528 441 12724 27 5 1 chr2 194900534 194902838 -58353745 + L1PA3 LINE L1 3877 6182 0 1383 195 5 146 chr2 194902838 194903168 -58353415 - MLT1F1 LTR MaLR -126 441 177 830 214 87 10 chr2 194903179 194903375 -58353208 - MLT1F1 LTR MaLR -356 211 1 957 323 114 29 chr2 194903394 194904266 -58352317 + L2 LINE L2 2112 3062 -210 1812 152 17 0 chr2 194905011 194905300 -58351283 - AluSx SINE Alu -18 294 1 573 280 90 59 chr2 194905308 194905662 -58350921 - L2 LINE L2 -2 3311 2947 622 337 40 4 chr2 194906438 194906687 -58349896 - MIR SINE MIR 0 262 5 32 0 0 0 chr2 194906892 194906924 -58349659 + AT_rich Low_complexity Low_complexity 1 32 0 191 340 121 24 chr2 194907553 194907759 -58348824 - L2 LINE L2 -667 2647 2422 1192 137 6 0 chr2 194908530 194908713 -58347870 - MLT1B LTR MaLR 0 390 207 484 300 121 5 chr2 194910407 194910597 -58345986 + MIR SINE MIR 33 244 -18 270 256 0 0 chr2 194912160 194912238 -58344345 + (TATG)n Simple_repeat Simple_repeat 2 79 0 28 0 0 0 chr2 194913182 194913210 -58343373 + AT_rich Low_complexity Low_complexity 1 28 0 1126 259 52 14 chr2 194913210 194913573 -58343010 - L1ME2 LINE L1 0 6164 5788 524 266 181 26 chr2 194914791 194915017 -58341566 + MIR SINE MIR 2 262 0 205 250 42 21 chr2 194916262 194916310 -58340273 + MIR SINE MIR 34 82 -180 606 242 96 6 chr2 194916386 194916564 -58340019 - MIR SINE MIR -58 204 11 395 245 278 7 chr2 194916574 194916725 -58339858 - MIR SINE MIR -67 195 4 282 305 160 52 chr2 194918039 194918600 -58337983 + HAL1 LINE L1 155 776 -1731 1428 176 134 35 chr2 194918603 194919028 -58337555 - MLT1C LTR MaLR 0 467 1 239 67 0 0 chr2 194919151 194919181 -58337402 + HAL1 LINE L1 825 854 -1653 193 311 0 0 chr2 194919183 194919228 -58337355 + MIR SINE MIR 218 262 0 2448 31 10 0 chr2 194919717 194920009 -58336574 + L1PA5 LINE L1 5853 6147 -7 28 0 0 0 chr2 194920009 194920037 -58336546 + AT_rich Low_complexity Low_complexity 1 28 0 244 333 28 35 chr2 194920705 194920849 -58335734 - L1ME2 LINE L1 -495 5669 5527 1505 176 55 0 chr2 194921281 194921536 -58335047 - AluSg SINE Alu -39 271 3 1977 150 42 3 chr2 194921621 194921955 -58334628 - MER7A DNA MER2_type -1 345 1 418 55 0 0 chr2 194922452 194922507 -58334076 + AluS SINE Alu 15 69 -244 327 294 135 16 chr2 194922940 194923066 -58333517 + MER115 DNA AcHobo 2 142 -551 1080 221 72 15 chr2 194923278 194923541 -58333042 + MER115 DNA AcHobo 416 693 0 386 341 158 29 chr2 194923656 194924169 -58332414 + L2 LINE L2 1951 2529 -785 224 353 88 10 chr2 194924566 194924668 -58331915 + L2 LINE L2 3127 3236 -36 196 275 0 0 chr2 194924958 194924998 -58331585 + L2 LINE L2 3263 3302 -11 2113 133 0 0 chr2 194925700 194926009 -58330574 - AluSc SINE Alu 0 309 1 24 0 0 70 chr2 194926565 194926608 -58329975 + AT_rich Low_complexity Low_complexity 1 40 0 2121 108 3 7 chr2 194926748 194927045 -58329538 - AluSc SINE Alu -13 296 1 1447 174 12 72 chr2 194927103 194927424 -58329159 + AluJb SINE Alu 1 302 -10 2137 113 0 13 chr2 194928414 194928715 -58327868 - AluSq SINE Alu -16 297 1 225 0 0 0 chr2 194930097 194930122 -58326461 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 24 0 0 0 chr2 194930179 194930203 -58326380 + AT_rich Low_complexity Low_complexity 1 24 0 457 226 172 59 chr2 194930943 194931147 -58325436 + MIR SINE MIR 15 241 -21 805 161 8 0 chr2 194931497 194931627 -58324956 - FLAM_C SINE Alu -2 131 1 232 254 0 0 chr2 194931933 194931988 -58324595 - Charlie8 DNA MER1_type -1000 1417 1363 278 339 131 15 chr2 194934928 194935058 -58321525 + MIR3 SINE MIR 21 165 -43 2382 94 0 0 chr2 194935058 194935356 -58321227 + AluSx SINE Alu 1 298 -14 22 35 0 0 chr2 194935564 194935593 -58320990 + AT_rich Low_complexity Low_complexity 1 29 0 1297 115 78 23 chr2 194935794 194936012 -58320571 - MER30 DNA MER1_type 0 230 1 1691 152 79 21 chr2 194936532 194936861 -58319722 + MER7A DNA MER2_type 1 346 0 837 226 6 6 chr2 194938610 194938778 -58317805 + FAM SINE Alu 1 168 -7 27 29 0 0 chr2 194938992 194939026 -58317557 + AT_rich Low_complexity Low_complexity 1 34 0 31 26 0 0 chr2 194939432 194939470 -58317113 + AT_rich Low_complexity Low_complexity 1 38 0 916 138 110 0 chr2 194939576 194939721 -58316862 + FRAM SINE Alu 8 168 -8 2832 16 0 0 chr2 194939724 194940036 -58316547 + AluYb8 SINE Alu 1 312 -6 23 0 0 0 chr2 194941383 194941406 -58315177 + AT_rich Low_complexity Low_complexity 1 23 0 1946 212 112 37 chr2 194941998 194942593 -58313990 - L1ME1 LINE L1 -9 6157 5509 1737 147 25 14 chr2 194942593 194942879 -58313704 + AluSx SINE Alu 1 289 -23 1946 212 112 37 chr2 194942879 194942925 -58313658 - L1ME1 LINE L1 -657 5509 5468 1613 233 106 93 chr2 194942915 194943379 -58313204 - L1 LINE L1 -1126 5020 4563 * 2141 144 25 3 chr2 194943379 194943746 -58312837 + THE1C LTR MaLR 1 375 0 1613 233 106 93 chr2 194943746 194944082 -58312501 - L1 LINE L1 -1583 4563 4233 429 167 14 0 chr2 194944082 194944154 -58312429 + MER58 DNA MER1_type 204 276 -2144 1613 233 106 93 chr2 194944154 194944584 -58311999 - L1 LINE L1 -1913 4233 3692 361 175 138 12 chr2 194944603 194944683 -58311900 + LOR1b LTR ERV1 1 90 -371 410 236 157 16 chr2 194944708 194944899 -58311684 - L1 LINE L1 -2913 3233 3016 695 137 55 27 chr2 194945942 194946088 -58310495 + LTR5 LTR ERVK 820 969 0 775 77 10 0 chr2 194946088 194946192 -58310391 + HERVK LTR ERVK 1 105 -7138 490 92 0 26 chr2 194946194 194946270 -58310313 + HERVK LTR ERVK 5464 5537 -1706 661 55 44 0 chr2 194946473 194946564 -58310019 + HERVK LTR ERVK 7149 7243 0 5140 133 55 13 chr2 194946564 194947408 -58309175 + LTR5 LTR ERVK 1 879 -90 1811 137 39 3 chr2 194947954 194948238 -58308345 - AluSx SINE Alu -18 294 1 196 292 208 15 chr2 194948917 194949119 -58307464 + L2 LINE L2 2149 2389 -925 359 199 7 149 chr2 194949295 194949436 -58307147 + MER94 DNA DNA 10 130 -4 297 263 81 0 chr2 194949689 194949788 -58306795 + MIR SINE MIR 101 207 -55 1790 156 7 3 chr2 194949880 194950186 -58306397 - AluSx SINE Alu 0 307 1 36 23 0 0 chr2 194950503 194950546 -58306037 + AT_rich Low_complexity Low_complexity 1 43 0 400 241 0 28 chr2 194950608 194950716 -58305867 + L1MC4a LINE L1 5772 5876 -1932 2195 105 10 3 chr2 194950716 194951021 -58305562 - AluSx SINE Alu -5 307 1 1476 201 7 32 chr2 194951046 194951329 -58305254 + AluJo SINE Alu 1 276 -36 908 207 75 5 chr2 194951329 194951542 -58305041 + AluJb SINE Alu 32 259 -53 5381 180 33 24 chr2 194951708 194953224 -58303359 - L1MB2 LINE L1 -14 6157 4656 554 252 24 0 chr2 194953224 194953351 -58303232 - FLAM_A SINE Alu -3 130 1 5381 180 33 24 chr2 194953351 194953647 -58302936 - L1MB2 LINE L1 -1515 4656 4328 2463 83 3 0 chr2 194953647 194953959 -58302624 + AluSp SINE Alu 1 313 0 5381 180 33 24 chr2 194953959 194954176 -58302407 - L1MB2 LINE L1 -1843 4328 4114 228 191 32 0 chr2 194954180 194954243 -58302340 - L1MB2 LINE L1 -2170 3976 3912 608 156 21 0 chr2 194954245 194954341 -58302242 + FRAM SINE Alu 60 157 -19 510 135 0 22 chr2 194954350 194954439 -58302144 - L1MB2 LINE L1 -2231 3915 3829 24 91 0 0 chr2 194954845 194954911 -58301672 + AT_rich Low_complexity Low_complexity 1 66 0 845 254 42 0 chr2 194955098 194955315 -58301268 - MIR SINE MIR -14 248 23 201 39 0 0 chr2 194955870 194955896 -58300687 + (TTG)n Simple_repeat Simple_repeat 2 27 0 530 343 144 31 chr2 194955968 194956356 -58300227 - L2 LINE L2 -1 3271 2840 459 0 0 0 chr2 194957153 194957204 -58299379 + (TG)n Simple_repeat Simple_repeat 1 51 0 336 24 0 0 chr2 194957203 194957244 -58299339 + (GA)n Simple_repeat Simple_repeat 1 41 0 * 1632 138 29 33 chr2 194957247 194957522 -58299061 - AluJb SINE Alu -38 274 1 395 268 141 10 chr2 194959603 194959801 -58296782 + MIR SINE MIR 2 225 -37 197 238 32 0 chr2 194960224 194960287 -58296296 - L2 LINE L2 -1684 1630 1566 399 74 0 0 chr2 194960387 194960441 -58296142 - MADE1 DNA Mariner -26 54 1 2730 268 135 43 chr2 194960467 194961564 -58295019 - L2 LINE L2 -417 2897 1700 3872 123 8 75 chr2 194961591 194961872 -58294711 - L1MC1 LINE L1 -1 6612 6314 1437 171 54 29 chr2 194961872 194962152 -58294431 - AluJo SINE Alu -25 287 1 3872 123 8 75 chr2 194962152 194962588 -58293995 - L1MC1 LINE L1 -299 6314 5943 1090 59 0 0 chr2 194962591 194962726 -58293857 - AluYa5/8 SINE Alu -3 307 173 1105 117 43 0 chr2 194962726 194962888 -58293695 - L1MC1 LINE L1 -673 5951 5783 * 4867 221 23 51 chr2 194962872 194963134 -58293449 - L1MC1 LINE L1 -923 5503 5235 270 81 0 0 chr2 194963134 194963171 -58293412 + (TA)n Simple_repeat Simple_repeat 1 37 0 4867 221 23 51 chr2 194963171 194963776 -58292807 - L1MC1 LINE L1 -1191 5235 4615 1868 139 36 3 chr2 194963776 194964078 -58292505 - AluSq SINE Alu -1 312 1 4867 221 23 51 chr2 194964078 194964510 -58292073 - L1MC1 LINE L1 -1811 4615 4248 2375 103 0 0 chr2 194964510 194964820 -58291763 - AluSg SINE Alu 0 310 1 4867 221 23 51 chr2 194964820 194965035 -58291548 - L1MC1 LINE L1 -2178 4248 4029 1458 129 51 39 chr2 194965033 194965151 -58291432 - L1MC1 LINE L1 -4415 2011 1896 * 2252 117 10 0 chr2 194965151 194965459 -58291124 - AluSx SINE Alu -1 311 1 1458 129 51 39 chr2 194965459 194965863 -58290720 - L1MC1 LINE L1 -4530 1896 1398 371 283 176 19 chr2 194966504 194966709 -58289874 + MIR SINE MIR 8 244 -18 268 154 0 0 chr2 194967074 194967113 -58289470 + MIR SINE MIR 189 227 -35 295 286 0 151 chr2 194967252 194967357 -58289226 + L2 LINE L2 2896 2959 -313 2273 107 7 0 chr2 194967357 194967656 -58288927 - AluSx SINE Alu -11 301 1 295 286 0 151 chr2 194967656 194967749 -58288834 + L2 LINE L2 2959 3064 -208 24 32 0 0 chr2 194967857 194967888 -58288695 + AT_rich Low_complexity Low_complexity 1 31 0 2326 84 10 0 chr2 194968079 194968376 -58288207 - AluY SINE Alu -11 300 1 2178 118 3 7 chr2 194968377 194968683 -58287900 - AluSq SINE Alu -8 305 1 184 333 0 0 chr2 194968705 194968756 -58287827 - MIR3 SINE MIR -14 194 144 842 304 65 20 chr2 194969881 194970339 -58286244 + L1MC/D LINE L1 5255 5733 -2075 717 260 56 0 chr2 194970819 194971015 -58285568 - MIR SINE MIR 0 262 56 242 338 137 39 chr2 194971511 194972306 -58284277 + L2 LINE L2 1233 2105 -1209 712 198 0 0 chr2 194972418 194972539 -58284044 + FLAM_C SINE Alu 7 127 -16 483 247 87 27 chr2 194972793 194973067 -58283516 - MIR SINE MIR 0 262 51 337 284 166 24 chr2 194973095 194973264 -58283319 - MIR SINE MIR -4 258 66 259 238 0 60 chr2 194973269 194973353 -58283230 + MLT1K LTR MaLR 1 79 -476 219 288 30 0 chr2 194973385 194973451 -58283132 + L2 LINE L2 2307 2374 -940 1675 197 94 50 chr2 194973451 194973949 -58282634 + MLT2B1 LTR ERVL 1 520 0 1974 167 85 0 chr2 194974338 194974703 -58281880 - MSTD LTR MaLR 0 396 1 1400 153 3 61 chr2 194974722 194974983 -58281600 - L1MA4 LINE L1 0 6300 6058 1659 149 35 17 chr2 194974983 194975272 -58281311 - AluJo SINE Alu -13 299 6 1400 153 3 61 chr2 194975272 194975323 -58281260 - L1MA4 LINE L1 -242 6058 6006 21 0 0 0 chr2 194975570 194975591 -58280992 + AT_rich Low_complexity Low_complexity 1 21 0 430 216 134 62 chr2 194976140 194976334 -58280249 - MIR SINE MIR -26 236 29 287 130 19 0 chr2 194977100 194977154 -58279429 + (TAGGG)n Simple_repeat Simple_repeat 1 55 0 180 77 0 0 chr2 194977590 194977616 -58278967 + (TAA)n Simple_repeat Simple_repeat 3 28 0 414 0 0 0 chr2 194977791 194977837 -58278746 + (CA)n Simple_repeat Simple_repeat 2 47 0 5976 104 12 7 chr2 194977915 194979083 -58277500 + L1PA13 LINE L1 4991 6163 0 24 77 0 0 chr2 194979302 194979354 -58277229 + AT_rich Low_complexity Low_complexity 1 52 0 345 278 193 87 chr2 194980062 194980497 -58276086 + MLT1K LTR MaLR 76 556 -32 197 32 0 32 chr2 194980497 194980528 -58276055 + (TTTTTG)n Simple_repeat Simple_repeat 6 35 0 181 258 32 16 chr2 194980682 194980744 -58275839 - L2 LINE L2 -80 3233 3171 523 216 7 13 chr2 194981279 194981432 -58275151 + CT-rich Low_complexity Low_complexity 3 154 0 585 42 0 0 chr2 194981478 194981550 -58275033 + (TA)n Simple_repeat Simple_repeat 2 73 0 11402 116 29 37 chr2 194981553 194983415 -58273168 - Tigger1 DNA MER2_type -570 1848 2 280 343 22 7 chr2 194984182 194984319 -58272264 - MIR SINE MIR 0 262 124 321 260 53 47 chr2 194984526 194984676 -58271907 + L1MEd LINE L1 298 448 -5671 21 71 0 0 chr2 194984880 194984922 -58271661 + AT_rich Low_complexity Low_complexity 1 42 0 325 304 2 22 chr2 194985020 194985131 -58271452 - MIR SINE MIR -78 130 21 1765 152 21 3 chr2 194985171 194985454 -58271129 + AluJb SINE Alu 1 288 -24 357 43 0 0 chr2 194985457 194985504 -58271079 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 12539 182 19 33 chr2 194986596 194987756 -58268827 + L1MA3 LINE L1 1568 2742 -4982 2119 131 3 3 chr2 194987756 194988069 -58268514 + AluSq SINE Alu 1 313 0 12539 182 19 33 chr2 194988069 194989688 -58266895 + L1MA3 LINE L1 2742 4381 -3343 933 179 46 26 chr2 194989688 194989883 -58266700 + AluJo SINE Alu 87 285 -27 12539 182 19 33 chr2 194989883 194991957 -58264626 + L1MA3 LINE L1 4381 6420 -1304 2207 91 7 10 chr2 194991957 194992254 -58264329 - AluSx SINE Alu -16 296 1 12539 182 19 33 chr2 194992254 194993542 -58263041 + L1MA3 LINE L1 6420 7724 0 2170 108 15 0 chr2 194993578 194993912 -58262671 - L1PA10 LINE L1 -776 5370 5032 5788 81 5 1 chr2 194993914 194994691 -58261892 + L1PA10 LINE L1 5385 6164 -4 2004 155 0 3 chr2 194995552 194995862 -58260721 - AluJb SINE Alu -3 309 1 232 299 113 10 chr2 194995862 194995959 -58260624 - MIR SINE MIR -102 160 54 251 288 0 0 chr2 194996212 194996278 -58260305 + MER113 DNA MER1_type? 10 75 -446 734 212 135 46 chr2 194996307 194996513 -58260070 + MER113 DNA MER1_type? 123 370 -151 2013 86 79 4 chr2 194996513 194996792 -58259791 - AluSp SINE Alu -10 303 4 734 212 135 46 chr2 194996792 194996911 -58259672 + MER113 DNA MER1_type? 370 477 -44 309 250 102 19 chr2 194997070 194997178 -58259405 + MIR SINE MIR 31 147 -115 668 160 0 25 chr2 194997301 194997420 -58259163 + AluJb SINE Alu 140 255 -57 207 0 0 0 chr2 194997629 194997652 -58258931 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 1027 155 7 0 chr2 194998092 194998247 -58258336 + AluJb SINE Alu 1 156 -156 265 149 0 0 chr2 194999139 194999186 -58257397 + L1MA3 LINE L1 6259 6305 0 2520 71 0 0 chr2 194999338 194999647 -58256936 - AluY SINE Alu -2 309 1 808 211 6 28 chr2 194999653 194999833 -58256750 - MER5B DNA MER1_type -1 177 2 431 247 31 0 chr2 194999852 194999949 -58256634 + MER5A DNA MER1_type 14 113 -76 825 176 16 36 chr2 195000198 195000391 -58256192 - MER53 DNA DNA 0 189 1 696 246 138 66 chr2 195001583 195002058 -58254525 + MLT1H LTR MaLR 14 545 -4 191 245 116 13 chr2 195002124 195002243 -58254340 - MER5B DNA MER1_type -48 139 3 227 310 0 23 chr2 195003658 195003745 -58252838 - MLT1I LTR MaLR 0 409 325 510 301 88 35 chr2 195004479 195004864 -58251719 + MLT1K LTR MaLR 151 587 -1 1396 159 45 12 chr2 195004878 195005123 -58251460 - AluJo SINE Alu -17 295 43 225 287 92 11 chr2 195005680 195005767 -58250816 + MIR SINE MIR 40 133 -75 271 323 61 76 chr2 195006927 195006996 -58249587 - L3 LINE CR1 -18 1559 1490 589 259 95 0 chr2 195006996 195007185 -58249398 - MER3 DNA MER1_type 0 209 3 271 323 61 76 chr2 195007185 195007313 -58249270 - L3 LINE CR1 -87 1490 1365 317 285 102 84 chr2 195008117 195008616 -58247967 - MLT1J LTR MaLR 0 511 4 487 275 15 0 chr2 195008734 195008865 -58247718 - MER94 DNA DNA 0 134 2 199 196 43 0 chr2 195008890 195008936 -58247647 + MIR SINE MIR 65 112 -150 1687 185 122 14 chr2 195008946 195009381 -58247202 - MLT1F LTR MaLR 0 542 73 978 179 6 0 chr2 195009382 195009544 -58247039 - AluJo SINE Alu -147 165 3 227 130 0 22 chr2 195009749 195009795 -58246788 + (TA)n Simple_repeat Simple_repeat 1 45 0 763 162 0 0 chr2 195009811 195009922 -58246661 - AluJo SINE Alu -30 282 172 551 246 0 0 chr2 195009921 195010043 -58246540 - AluJo SINE Alu -190 122 1 * 449 217 0 0 chr2 195010110 195010193 -58246390 - FLAM_C SINE Alu -32 111 29 419 250 0 0 chr2 195010302 195010390 -58246193 - FLAM_C SINE Alu -26 117 30 767 112 0 0 chr2 195011338 195011445 -58245138 + AluSc SINE Alu 184 290 -19 548 224 0 45 chr2 195011507 195011641 -58244942 - MIR SINE MIR -88 174 47 2051 101 7 55 chr2 195012110 195012284 -58244299 - AluSx SINE Alu -17 295 141 2148 118 0 14 chr2 195012284 195012581 -58244002 - AluSg SINE Alu -17 293 1 2051 101 7 55 chr2 195012581 195012714 -58243869 - AluSx SINE Alu -171 141 3 2090 110 3 3 chr2 195013293 195013585 -58242998 - AluSx SINE Alu -20 292 1 1440 188 38 14 chr2 195013585 195013873 -58242710 - AluJo SINE Alu -7 295 1 300 262 78 19 chr2 195014144 195014247 -58242336 - L2 LINE L2 0 3313 3205 306 277 140 85 chr2 195014773 195015102 -58241481 + L1M2 LINE L1 578 924 -5925 21 36 0 0 chr2 195015271 195015299 -58241284 + GC_rich Low_complexity Low_complexity 1 28 0 1604 197 26 3 chr2 195017187 195017492 -58239091 + AluJb SINE Alu 1 312 0 198 295 25 41 chr2 195018241 195018363 -58238220 + MIR SINE MIR 88 207 -55 219 296 8 98 chr2 195019104 195019236 -58237347 - MER5B DNA MER1_type 0 178 59 369 283 28 7 chr2 195020478 195020623 -58235960 + CT-rich Low_complexity Low_complexity 1 148 0 750 125 0 0 chr2 195021484 195021588 -58234995 - AluSx SINE Alu -15 297 194 1098 106 0 0 chr2 195021589 195021730 -58234853 - AluSx SINE Alu -172 141 1 1768 136 4 43 chr2 195022652 195022932 -58233651 + MER1B DNA MER1_type 1 269 -70 22 70 0 0 chr2 195023283 195023326 -58233257 + AT_rich Low_complexity Low_complexity 1 43 0 315 0 0 0 chr2 195023326 195023361 -58233222 + (CA)n Simple_repeat Simple_repeat 2 36 0 2132 116 31 0 chr2 195023468 195023760 -58232823 - AluSx SINE Alu -11 301 1 211 297 16 0 chr2 195024443 195024507 -58232076 + L2 LINE L2 2306 2370 -944 1016 178 0 81 chr2 195024519 195024766 -58231817 - AluJb SINE Alu -14 298 72 338 309 123 43 chr2 195024824 195025310 -58231273 + L2 LINE L2 2437 2961 -353 328 267 126 94 chr2 195025531 195025708 -58230875 + L2 LINE L2 3028 3219 -94 2225 121 0 0 chr2 195025708 195026006 -58230577 + AluSq SINE Alu 1 298 -15 328 267 126 94 chr2 195026006 195026105 -58230478 + L2 LINE L2 3219 3313 0 1255 170 4 30 chr2 195026291 195026521 -58230062 + AluJo SINE Alu 87 310 -2 198 103 0 0 chr2 195026659 195026688 -58229895 + (CA)n Simple_repeat Simple_repeat 1 29 0 278 172 47 0 chr2 195026731 195026795 -58229788 - L1MA10 LINE L1 -2 6332 6266 2380 94 0 0 chr2 195027628 195027927 -58228656 + AluSg SINE Alu 1 299 -11 1674 175 3 26 chr2 195028894 195029202 -58227381 - AluJb SINE Alu -10 302 2 891 271 109 26 chr2 195029319 195029851 -58226732 - L1MC4a LINE L1 -1936 5872 5297 451 224 335 0 chr2 195029860 195030030 -58226553 + L2 LINE L2 2403 2629 -685 419 266 290 17 chr2 195030031 195030324 -58226259 - LTR33 LTR ERVL -6 515 143 924 270 102 37 chr2 195030328 195030709 -58225874 + L2 LINE L2 2908 3313 0 478 198 30 0 chr2 195030767 195030934 -58225649 + (TA)n Simple_repeat Simple_repeat 2 173 0 368 295 56 64 chr2 195031316 195031550 -58225033 + MIR SINE MIR 28 259 -3 234 314 35 35 chr2 195032063 195032149 -58224434 + MIR SINE MIR 20 105 -157 720 299 80 11 chr2 195032406 195032680 -58223903 + MLT1I LTR MaLR 94 386 -23 224 390 13 13 chr2 195033677 195033754 -58222829 + L2 LINE L2 3132 3208 -64 275 265 12 12 chr2 195033800 195033883 -58222700 - LTR67 LTR ERVL -11 546 464 359 295 72 36 chr2 195034633 195034772 -58221811 - L2 LINE L2 -192 3080 2937 1355 209 188 14 chr2 195035954 195036384 -58220199 - MLT1D LTR MaLR 0 505 1 737 120 0 70 chr2 195036405 195036547 -58220036 - FLAM_C SINE Alu 0 143 12 477 281 122 6 chr2 195036645 195036809 -58219774 + MIR SINE MIR 15 197 -65 757 143 0 0 chr2 195036825 195036937 -58219646 + FLAM_C SINE Alu 6 117 -26 365 43 0 0 chr2 195036972 195037019 -58219564 + MADE1 DNA Mariner 1 47 -33 23 0 0 0 chr2 195037396 195037419 -58219164 + AT_rich Low_complexity Low_complexity 1 23 0 204 323 65 0 chr2 195037965 195038027 -58218556 - MIR3 SINE MIR -3 205 140 22 35 0 0 chr2 195038876 195038905 -58217678 + AT_rich Low_complexity Low_complexity 1 29 0 207 227 45 0 chr2 195039296 195039362 -58217221 + (TG)n Simple_repeat Simple_repeat 2 70 0 21 36 0 0 chr2 195039456 195039484 -58217099 + AT_rich Low_complexity Low_complexity 1 28 0 253 236 86 0 chr2 195039589 195039684 -58216899 - L1MC/D LINE L1 -694 5462 5363 23 68 0 0 chr2 195039780 195039824 -58216759 + AT_rich Low_complexity Low_complexity 1 44 0 2093 185 47 23 chr2 195039872 195041138 -58215445 - L1MB7 LINE L1 0 6184 4847 263 281 62 25 chr2 195041141 195041301 -58215282 - MER104 DNA Tc2 -12 168 3 2730 20 0 0 chr2 195041305 195041609 -58214974 - AluY SINE Alu -7 304 1 26 0 0 0 chr2 195041724 195041750 -58214833 + AT_rich Low_complexity Low_complexity 1 26 0 206 265 147 59 chr2 195041755 195041857 -58214726 + L2 LINE L2 3162 3272 0 195 100 0 0 chr2 195042050 195042080 -58214503 + (T)n Simple_repeat Simple_repeat 1 30 0 36 70 0 0 chr2 195042718 195042789 -58213794 + AT_rich Low_complexity Low_complexity 1 71 0 1717 128 4 0 chr2 195043833 195044083 -58212500 + L1MA5A LINE L1 5541 5791 -506 313 141 33 22 chr2 195044085 195044177 -58212406 + (TA)n Simple_repeat Simple_repeat 1 93 0 2948 135 29 6 chr2 195044220 195044732 -58211851 + L1MA5A LINE L1 5773 6296 -1 2244 97 3 10 chr2 195044740 195045050 -58211533 + AluSx SINE Alu 1 308 -4 220 377 19 26 chr2 195045061 195045215 -58211368 + L2 LINE L2 2847 2999 -273 183 340 60 20 chr2 195045366 195045466 -58211117 - L2 LINE L2 -273 2999 2896 1577 186 0 0 chr2 195045513 195045766 -58210817 + AluJb SINE Alu 1 253 -59 21 71 0 0 chr2 195045920 195045962 -58210621 + AT_rich Low_complexity Low_complexity 1 42 0 242 274 32 0 chr2 195045977 195046072 -58210511 + L1ME4a LINE L1 5934 6031 -90 883 199 20 146 chr2 195046327 195046718 -58209865 - L1MC4 LINE L1 -168 7874 7533 1814 94 4 8 chr2 195047796 195048052 -58208531 - AluSx SINE Alu -13 299 45 882 342 169 28 chr2 195048108 195049309 -58207274 + L2 LINE L2 1698 3062 -251 1588 163 54 11 chr2 195050139 195050416 -58206167 + AluJo SINE Alu 6 294 -18 219 36 0 0 chr2 195050684 195050712 -58205871 + (TG)n Simple_repeat Simple_repeat 1 28 0 396 277 25 17 chr2 195050942 195051061 -58205522 - MER5B DNA MER1_type -58 120 1 759 196 71 6 chr2 195052661 195052829 -58203754 + MER58A DNA MER1_type 45 223 -1 340 313 8 39 chr2 195053026 195053154 -58203429 + MIR SINE MIR 18 141 -67 231 210 0 50 chr2 195053296 195053396 -58203187 + (TTTG)n Simple_repeat Simple_repeat 2 96 0 196 286 0 0 chr2 195053568 195053617 -58202966 - MIR SINE MIR -149 113 65 812 251 14 28 chr2 195053908 195054119 -58202464 + MIR SINE MIR 41 248 -14 21 57 0 0 chr2 195054605 195054640 -58201943 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr2 195054941 195054964 -58201619 + AT_rich Low_complexity Low_complexity 1 23 0 516 279 12 63 chr2 195055319 195055573 -58201010 - MER112 DNA MER1_type -12 248 8 1661 151 32 11 chr2 195056783 195057061 -58199522 + AluJo SINE Alu 1 284 -28 30 59 0 0 chr2 195057063 195057114 -58199469 + AT_rich Low_complexity Low_complexity 1 51 0 26 0 0 0 chr2 195057281 195057307 -58199276 + AT_rich Low_complexity Low_complexity 1 26 0 21 57 0 0 chr2 195057904 195057939 -58198644 + AT_rich Low_complexity Low_complexity 1 35 0 408 97 0 0 chr2 195058014 195058076 -58198507 + (TAGA)n Simple_repeat Simple_repeat 1 62 0 462 191 27 55 chr2 195058078 195058188 -58198395 + FLAM_C SINE Alu 27 133 -10 27 0 0 0 chr2 195058191 195058218 -58198365 + AT_rich Low_complexity Low_complexity 1 27 0 36 106 0 0 chr2 195058554 195058695 -58197888 + AT_rich Low_complexity Low_complexity 1 141 0 1067 148 0 12 chr2 195058904 195059066 -58197517 + AluSg/x SINE Alu 129 288 -24 23 0 0 0 chr2 195059066 195059089 -58197494 + AT_rich Low_complexity Low_complexity 1 23 0 24 32 0 0 chr2 195060123 195060154 -58196429 + AT_rich Low_complexity Low_complexity 1 31 0 219 316 42 11 chr2 195060350 195060445 -58196138 - L2 LINE L2 -1 3312 3215 791 271 71 4 chr2 195061455 195061695 -58194888 - MIR SINE MIR 0 262 7 1873 135 10 10 chr2 195062232 195062543 -58194040 + AluJb SINE Alu 1 311 -1 425 290 162 34 chr2 195063523 195063664 -58192919 - L1ME4a LINE L1 -5 6116 5994 360 0 0 0 chr2 195063664 195063704 -58192879 + (TG)n Simple_repeat Simple_repeat 2 41 0 425 290 162 34 chr2 195063704 195063859 -58192724 - L1ME4a LINE L1 -127 5994 5782 289 299 113 17 chr2 195064677 195064854 -58191729 + MIR SINE MIR 57 250 -12 1940 156 16 0 chr2 195067555 195067862 -58188721 - AluJb SINE Alu 0 312 1 1831 184 0 0 chr2 195068977 195069276 -58187307 - AluJb SINE Alu -13 299 1 2381 91 0 0 chr2 195069347 195069656 -58186927 - AluSc SINE Alu 0 309 1 270 426 40 0 chr2 195069728 195069876 -58186707 - L2 LINE L2 -12 3260 3107 583 305 66 58 chr2 195070223 195070717 -58185866 - L2 LINE L2 -160 3112 2611 2234 88 3 22 chr2 195070717 195071034 -58185549 + AluY SINE Alu 1 311 0 583 305 66 58 chr2 195071034 195071143 -58185440 - L2 LINE L2 -661 2611 2504 233 210 48 48 chr2 195071355 195071417 -58185166 - MIR SINE MIR -60 148 87 332 296 26 9 chr2 195071595 195071710 -58184873 + CT-rich Low_complexity Low_complexity 1 117 0 1921 155 0 0 chr2 195072269 195072566 -58184017 - AluJb SINE Alu -15 297 1 368 210 43 113 chr2 195073204 195073390 -58183193 - L1ME LINE L1 -425 5696 5524 2077 90 0 93 chr2 195073502 195073823 -58182760 - AluSg SINE Alu -19 291 1 510 215 0 0 chr2 195073947 195074077 -58182506 + (TA)n Simple_repeat Simple_repeat 1 130 0 1279 106 8 98 chr2 195075071 195075254 -58181329 - L1MA4 LINE L1 -6 6294 6141 1631 159 76 0 chr2 195075254 195075530 -58181053 - AluSq SINE Alu -16 297 1 1279 106 8 98 chr2 195075530 195075611 -58180972 - L1MA4 LINE L1 -159 6141 6054 1651 163 0 15 chr2 195075613 195075877 -58180706 - AluSq SINE Alu -50 263 4 23 54 0 0 chr2 195076388 195076425 -58180158 + AT_rich Low_complexity Low_complexity 1 37 0 485 217 19 28 chr2 195076752 195076858 -58179725 + MER81 DNA DNA 7 111 -3 1354 198 88 11 chr2 195077240 195077523 -58179060 - AluJo SINE Alu -7 305 1 2566 18 0 0 chr2 195077962 195078243 -58178340 - AluYb8 SINE Alu -5 313 33 320 254 223 15 chr2 195078808 195079005 -58177578 + MER112 DNA MER1_type 17 254 -6 2365 88 10 0 chr2 195079084 195079380 -58177203 + AluSx SINE Alu 1 299 -13 195 213 80 80 chr2 195079454 195079529 -58177054 + L3b LINE CR1 1296 1370 -213 546 270 68 43 chr2 195080281 195080559 -58176024 - L2 LINE L2 -161 3152 2868 32 0 0 0 chr2 195081078 195081110 -58175473 + AT_rich Low_complexity Low_complexity 1 32 0 390 272 103 43 chr2 195081590 195081774 -58174809 + L1ME1 LINE L1 2 196 -5923 245 337 33 11 chr2 195081922 195082014 -58174569 + L1ME1 LINE L1 600 693 -5426 333 0 0 0 chr2 195082018 195082055 -58174528 + (CA)n Simple_repeat Simple_repeat 2 38 0 633 186 62 31 chr2 195082142 195082271 -58174312 + FLAM_C SINE Alu 1 133 0 517 269 201 5 chr2 195082273 195082641 -58173942 + L1ME1 LINE L1 2564 3003 -3126 267 305 108 23 chr2 195082662 195083180 -58173403 + L1ME1 LINE L1 3236 3797 -2332 238 308 48 10 chr2 195083363 195083467 -58173116 + L1ME1 LINE L1 5461 5568 -577 407 245 113 35 chr2 195083497 195083728 -58172855 + L1ME1 LINE L1 5669 5921 -240 22 70 0 0 chr2 195084234 195084277 -58172306 + AT_rich Low_complexity Low_complexity 1 43 0 201 162 0 0 chr2 195084340 195084377 -58172206 + T-rich Low_complexity Low_complexity 1 37 0 24 67 0 0 chr2 195084859 195084904 -58171679 + AT_rich Low_complexity Low_complexity 1 45 0 1146 204 50 39 chr2 195085611 195085735 -58170848 - Charlie5 DNA MER1_type -4 2620 2499 2221 139 34 16 chr2 195085735 195086116 -58170467 - MLT1B LTR MaLR 0 390 3 1146 204 50 39 chr2 195086116 195086374 -58170209 - Charlie5 DNA MER1_type -125 2499 2234 656 168 0 30 chr2 195086377 195086508 -58170075 - MER3 DNA MER1_type -41 168 42 2224 113 3 3 chr2 195086616 195086925 -58169658 - AluSc SINE Alu 0 309 1 650 119 8 34 chr2 195087425 195087543 -58169040 + MER3 DNA MER1_type 54 168 -41 1013 207 31 0 chr2 195087546 195087802 -58168781 + MER3 DNA MER1_type 2234 2497 0 306 204 0 0 chr2 195087802 195087856 -58168727 + MLT1B LTR MaLR 1 54 -336 28 48 0 0 chr2 195092574 195092616 -58163967 + AT_rich Low_complexity Low_complexity 1 42 0 342 67 0 0 chr2 195093203 195093248 -58163335 + (TA)n Simple_repeat Simple_repeat 1 45 0 2119 91 0 52 chr2 195093262 195093569 -58163014 - AluSx SINE Alu -21 291 1 1793 176 0 0 chr2 195095318 195095630 -58160953 - AluJb SINE Alu 0 313 2 1720 299 96 20 chr2 195095736 195096629 -58159954 + L2 LINE L2 2171 3126 -187 4455 206 49 29 chr2 195096640 195096976 -58159607 - L1MB7 LINE L1 -15 6169 5841 2463 66 7 3 chr2 195096976 195097280 -58159303 - AluY SINE Alu -6 305 1 4455 206 49 29 chr2 195097280 195098696 -58157887 - L1MB7 LINE L1 -343 5841 4455 1942 135 3 16 chr2 195098696 195099000 -58157583 - AluSq SINE Alu -11 302 3 1649 211 3 10 chr2 195099004 195099307 -58157276 - AluJo SINE Alu -11 301 1 4455 206 49 29 chr2 195099307 195099538 -58157045 - L1MB7 LINE L1 -1731 4453 4228 2142 128 0 3 chr2 195099538 195099843 -58156740 - AluSx SINE Alu -8 304 1 4455 206 49 29 chr2 195099843 195100024 -58156559 - L1MB7 LINE L1 -1956 4228 3966 1585 193 26 7 chr2 195103278 195103584 -58152999 + AluJb SINE Alu 1 312 0 198 295 25 41 chr2 195104333 195104455 -58152128 + MIR SINE MIR 88 207 -55 219 296 8 98 chr2 195105196 195105328 -58151255 - MER5B DNA MER1_type 0 178 59 369 283 28 7 chr2 195106570 195106715 -58149868 + CT-rich Low_complexity Low_complexity 1 148 0 750 125 0 0 chr2 195107576 195107680 -58148903 - AluSx SINE Alu -15 295 192 1098 106 0 0 chr2 195107681 195107822 -58148761 - AluSx SINE Alu -172 141 1 1768 136 4 43 chr2 195108744 195109024 -58147559 + MER1B DNA MER1_type 1 269 -70 22 70 0 0 chr2 195109375 195109418 -58147165 + AT_rich Low_complexity Low_complexity 1 43 0 315 0 0 0 chr2 195109418 195109453 -58147130 + (CA)n Simple_repeat Simple_repeat 2 36 0 2132 116 31 0 chr2 195109560 195109852 -58146731 - AluSx SINE Alu -11 301 1 211 297 16 0 chr2 195110535 195110599 -58145984 + L2 LINE L2 2306 2370 -944 1016 178 0 81 chr2 195110611 195110858 -58145725 - AluJb SINE Alu -14 298 72 338 309 123 43 chr2 195110916 195111402 -58145181 + L2 LINE L2 2437 2961 -353 328 267 126 94 chr2 195111623 195111800 -58144783 + L2 LINE L2 3028 3219 -94 2225 121 0 0 chr2 195111800 195112098 -58144485 + AluSq SINE Alu 1 298 -15 328 267 126 94 chr2 195112098 195112197 -58144386 + L2 LINE L2 3219 3313 0 1255 170 4 30 chr2 195112383 195112613 -58143970 + AluJo SINE Alu 87 310 -2 198 103 0 0 chr2 195112751 195112780 -58143803 + (CA)n Simple_repeat Simple_repeat 1 29 0 278 172 47 0 chr2 195112823 195112887 -58143696 - L1MA10 LINE L1 -2 6332 6266 2335 94 3 0 chr2 195113720 195114018 -58142565 + AluSg SINE Alu 1 299 -11 1674 175 3 26 chr2 195114985 195115293 -58141290 - AluJb SINE Alu -10 302 2 891 271 109 26 chr2 195115410 195115942 -58140641 - L1MC4a LINE L1 -1936 5872 5297 451 224 335 0 chr2 195115951 195116121 -58140462 + L2 LINE L2 2403 2629 -685 366 274 294 17 chr2 195116122 195116414 -58140169 - LTR33 LTR ERVL -6 515 143 924 270 102 37 chr2 195116418 195116799 -58139784 + L2 LINE L2 2908 3313 0 478 198 30 0 chr2 195116857 195117024 -58139559 + (TA)n Simple_repeat Simple_repeat 2 173 0 368 295 56 64 chr2 195117406 195117640 -58138943 + MIR SINE MIR 28 259 -3 234 314 35 35 chr2 195118153 195118239 -58138344 + MIR SINE MIR 20 105 -157 720 299 80 11 chr2 195118496 195118770 -58137813 + MLT1I LTR MaLR 94 386 -23 224 390 13 13 chr2 195119767 195119844 -58136739 + L2 LINE L2 3132 3208 -64 275 265 12 12 chr2 195119890 195119973 -58136610 - LTR67 LTR ERVL -11 546 464 359 295 72 36 chr2 195120723 195120862 -58135721 - L2 LINE L2 -192 3080 2937 1355 209 188 14 chr2 195122044 195122474 -58134109 - MLT1D LTR MaLR 0 505 1 737 120 0 70 chr2 195122495 195122637 -58133946 - FLAM_C SINE Alu 0 143 12 477 281 122 6 chr2 195122735 195122899 -58133684 + MIR SINE MIR 15 197 -65 817 134 0 0 chr2 195122915 195123027 -58133556 + FLAM_C SINE Alu 6 117 -26 391 21 0 0 chr2 195123062 195123109 -58133474 + MADE1 DNA Mariner 1 47 -33 23 0 0 0 chr2 195123486 195123509 -58133074 + AT_rich Low_complexity Low_complexity 1 23 0 204 323 65 0 chr2 195124055 195124117 -58132466 - MIR3 SINE MIR -3 205 140 22 35 0 0 chr2 195124966 195124995 -58131588 + AT_rich Low_complexity Low_complexity 1 29 0 207 227 45 0 chr2 195125386 195125452 -58131131 + (TG)n Simple_repeat Simple_repeat 2 70 0 21 36 0 0 chr2 195125546 195125574 -58131009 + AT_rich Low_complexity Low_complexity 1 28 0 253 236 86 0 chr2 195125679 195125774 -58130809 - L1MC/D LINE L1 -694 5462 5363 23 68 0 0 chr2 195125870 195125914 -58130669 + AT_rich Low_complexity Low_complexity 1 44 0 2093 185 47 23 chr2 195125962 195127228 -58129355 - L1MB7 LINE L1 0 6184 4847 263 281 62 25 chr2 195127231 195127391 -58129192 - MER104 DNA Tc2 -12 168 3 2695 33 0 0 chr2 195127395 195127699 -58128884 - AluY SINE Alu -7 304 1 4455 211 49 25 chr2 195127699 195129113 -58127470 - L1MB7 LINE L1 -353 5831 4453 1942 135 3 16 chr2 195129113 195129417 -58127166 - AluSq SINE Alu -11 302 3 1649 211 3 10 chr2 195129421 195129724 -58126859 - AluJo SINE Alu -11 301 1 4455 211 49 25 chr2 195129724 195129955 -58126628 - L1MB7 LINE L1 -1733 4451 4227 2142 128 0 3 chr2 195129955 195130260 -58126323 - AluSx SINE Alu -8 304 1 4455 211 49 25 chr2 195130260 195130441 -58126142 - L1MB7 LINE L1 -1957 4227 3966 1542 146 92 25 chr2 195131767 195132048 -58124535 + AluSx SINE Alu 1 300 -12 23 0 0 0 chr2 195132174 195132197 -58124386 + AT_rich Low_complexity Low_complexity 1 23 0 300 259 0 25 chr2 195132403 195132484 -58124099 + GA-rich Low_complexity Low_complexity 3 81 0 288 0 0 0 chr2 195133088 195133120 -58123463 + (TTG)n Simple_repeat Simple_repeat 2 33 0 29 28 0 0 chr2 195134539 195134575 -58122008 + AT_rich Low_complexity Low_complexity 1 36 0 314 205 27 62 chr2 195136855 195136967 -58119616 - L1ME3A LINE L1 -117 6053 5946 782 146 8 0 chr2 195137180 195137303 -58119280 - FLAM_C SINE Alu -5 128 5 1850 122 45 58 chr2 195137619 195137997 -58118586 - THE1C LTR MaLR 0 375 3 203 241 138 11 chr2 195138189 195138276 -58118307 - MIR SINE MIR -101 161 64 211 279 90 66 chr2 195138329 195138451 -58118132 + MIR SINE MIR 89 213 -49 276 303 259 33 chr2 195138605 195139304 -58117279 - L2 LINE L2 -855 2459 1603 236 222 167 0 chr2 195139675 195139729 -58116854 + Charlie8 DNA MER1_type 1366 1428 -989 763 175 0 8 chr2 195139870 195139996 -58116587 + FLAM_C SINE Alu 1 125 -18 21 36 0 0 chr2 195140071 195140099 -58116484 + AT_rich Low_complexity Low_complexity 1 28 0 400 249 55 25 chr2 195140143 195140295 -58116288 + L1ME LINE L1 308 476 -5896 251 182 0 0 chr2 195140906 195140961 -58115622 + L1ME LINE L1 1005 1059 -5504 27 0 0 0 chr2 195140992 195141019 -58115564 + AT_rich Low_complexity Low_complexity 1 27 0 1370 105 43 0 chr2 195141032 195141241 -58115342 - L1PB3 LINE L1 0 6154 5937 490 268 119 23 chr2 195141246 195141704 -58114879 + L1ME LINE L1 917 1447 -4833 227 349 104 9 chr2 195141754 195141860 -58114723 - MIR3 SINE MIR -90 118 3 327 175 0 0 chr2 195143099 195143156 -58113427 - MLT1E2 LTR MaLR -553 73 17 2234 126 6 3 chr2 195143170 195143512 -58113071 + LOR1a LTR ERV1 1 343 -154 1804 155 24 38 chr2 195143515 195144140 -58112443 - L1M4 LINE L1 -577 5597 4930 2560 188 18 18 chr2 195144141 195144652 -58111931 - MER82 DNA MER2_type -135 518 8 300 330 191 5 chr2 195144795 195145004 -58111579 - MIR SINE MIR 0 262 15 477 343 48 48 chr2 195145068 195145377 -58111206 - L2 LINE L2 -40 3232 2924 348 24 0 0 chr2 195145414 195145455 -58111128 + (TG)n Simple_repeat Simple_repeat 1 41 0 193 352 29 19 chr2 195145485 195145590 -58110993 - L2 LINE L2 -484 2830 2725 2157 102 3 3 chr2 195145977 195146282 -58110301 + AluSx SINE Alu 1 305 0 347 333 32 0 chr2 195147233 195147359 -58109224 + MIR SINE MIR 84 213 -49 1784 171 81 18 chr2 195147381 195147778 -58108805 - MSTB LTR MaLR 0 426 5 255 371 21 14 chr2 195148208 195148348 -58108235 + L2 LINE L2 2597 2737 -577 830 181 22 16 chr2 195148698 195148880 -58107703 - MSTB LTR MaLR -239 187 5 255 371 21 14 chr2 195149310 195149450 -58107133 + L2 LINE L2 2597 2737 -577 214 232 159 0 chr2 195149508 195149577 -58107006 + MIR SINE MIR 183 262 0 338 0 24 0 chr2 195149693 195149735 -58106848 + (CA)n Simple_repeat Simple_repeat 1 43 0 376 330 97 40 chr2 195149864 195150040 -58106543 + L2 LINE L2 3086 3271 -1 23 68 0 0 chr2 195150472 195150516 -58106067 + GC_rich Low_complexity Low_complexity 1 44 0 261 163 0 0 chr2 195150848 195150897 -58105686 + (CAG)n Simple_repeat Simple_repeat 1 49 0 414 0 0 0 chr2 195151297 195151343 -58105240 + (CA)n Simple_repeat Simple_repeat 2 47 0 23 0 0 0 chr2 195151485 195151508 -58105075 + AT_rich Low_complexity Low_complexity 1 23 0 799 299 105 18 chr2 195152939 195153541 -58103042 + L2 LINE L2 2630 3300 -13 459 92 0 0 chr2 195153541 195153606 -58102977 + (TGGA)n Simple_repeat Simple_repeat 1 65 0 1047 171 159 52 chr2 195153838 195154089 -58102494 - AluJo SINE Alu -22 290 13 372 248 33 25 chr2 195154919 195155040 -58101543 - L1MC5 LINE L1 -50 7911 7790 6738 119 27 6 chr2 195155062 195156778 -58099805 - L1MA3 LINE L1 0 6305 4554 1933 193 82 20 chr2 195156814 195157317 -58099266 - L1ME2 LINE L1 -12 6152 5619 1972 149 0 14 chr2 195157473 195157769 -58098814 - AluSx SINE Alu -20 292 1 1137 203 55 7 chr2 195157781 195158072 -58098511 - L1MA9 LINE L1 -36 6276 5972 1851 152 48 9 chr2 195158631 195158947 -58097636 - MER7A DNA MER2_type 0 346 21 225 0 0 0 chr2 195159625 195159650 -58096933 + (CA)n Simple_repeat Simple_repeat 2 26 0 1095 135 0 0 chr2 195159655 195159811 -58096772 - AluSg/x SINE Alu -39 271 116 24 32 0 0 chr2 195160865 195160896 -58095687 + AT_rich Low_complexity Low_complexity 1 31 0 2219 154 62 38 chr2 195161516 195161965 -58094618 - MER66B LTR ERV1 0 486 27 29 47 0 0 chr2 195163410 195163453 -58093130 + AT_rich Low_complexity Low_complexity 1 43 0 655 336 141 34 chr2 195163555 195164291 -58092292 + L2 LINE L2 2155 2969 -345 24 0 0 0 chr2 195164379 195164403 -58092180 + AT_rich Low_complexity Low_complexity 1 24 0 202 307 102 49 chr2 195164917 195165122 -58091461 - L2 LINE L2 -9 3304 3089 543 200 27 92 chr2 195165230 195165445 -58091138 + L1MEc LINE L1 2498 2649 -3891 2190 161 74 0 chr2 195165445 195165837 -58090746 - MSTA LTR MaLR 0 428 8 227 259 71 0 chr2 195167333 195167418 -58089165 - L1MC4 LINE L1 -27 8015 7925 204 40 0 0 chr2 195167433 195167458 -58089125 + (CA)n Simple_repeat Simple_repeat 2 26 0 231 246 33 0 chr2 195168205 195168266 -58088317 + MLT1K LTR MaLR 522 584 -4 306 219 135 10 chr2 195168915 195169011 -58087572 + L2 LINE L2 3180 3287 -26 1800 172 0 7 chr2 195171756 195172053 -58084530 - AluJo SINE Alu -17 295 1 1487 164 0 4 chr2 195172632 195172863 -58083720 - AluJo SINE Alu -82 230 1 309 317 90 31 chr2 195173003 195173358 -58083225 - L1MC4a LINE L1 -532 5639 5531 594 253 30 66 chr2 195173442 195173640 -58082943 - MIR SINE MIR -36 226 36 29 28 0 0 chr2 195173772 195173808 -58082775 + AT_rich Low_complexity Low_complexity 1 36 0 284 333 98 83 chr2 195174096 195174553 -58082030 + L2 LINE L2 2809 3272 0 21 57 0 0 chr2 195175313 195175348 -58081235 + AT_rich Low_complexity Low_complexity 1 35 0 312 313 83 5 chr2 195176256 195176448 -58080135 + L1ME4a LINE L1 5527 5733 -388 2277 108 0 0 chr2 195176591 195176887 -58079696 - AluSx SINE Alu -16 296 1 248 230 69 11 chr2 195177162 195177249 -58079334 + L1ME4a LINE L1 6006 6097 -24 237 119 0 0 chr2 195177250 195177292 -58079291 + (A)n Simple_repeat Simple_repeat 1 42 0 650 187 39 60 chr2 195177687 195177869 -58078714 - MER5B DNA MER1_type 0 178 1 261 233 17 17 chr2 195178258 195178318 -58078265 + L2 LINE L2 3234 3293 -20 318 196 0 0 chr2 195178344 195178400 -58078183 - MER119 DNA MER1_type 0 583 528 1219 268 79 12 chr2 195178447 195178790 -58077793 - MER119 DNA MER1_type -215 368 3 227 164 0 36 chr2 195179994 195180049 -58076534 + T-rich Low_complexity Low_complexity 5 57 0 322 264 44 50 chr2 195180501 195180660 -58075923 - L2 LINE L2 -62 3251 3094 425 221 57 8 chr2 195181044 195181166 -58075417 + MER77 LTR ERV1 478 605 0 625 306 55 0 chr2 195181174 195181409 -58075174 - L2 LINE L2 -246 3067 2820 2531 60 0 0 chr2 195181612 195181911 -58074672 + AluY SINE Alu 1 299 -12 23 54 0 0 chr2 195183172 195183209 -58073374 + AT_rich Low_complexity Low_complexity 1 37 0 212 321 0 24 chr2 195183549 195183633 -58072950 + CT-rich Low_complexity Low_complexity 1 82 0 199 390 37 7 chr2 195183801 195183937 -58072646 - L2 LINE L2 -188 3084 2945 264 105 0 0 chr2 195184014 195184038 -58072545 - MER58A DNA MER1_type 0 224 201 576 229 86 0 chr2 195184038 195184196 -58072387 - MER58A DNA MER1_type 0 138 1 233 160 20 0 chr2 195184395 195184445 -58072138 + (TA)n Simple_repeat Simple_repeat 2 52 0 288 259 115 43 chr2 195184894 195185033 -58071550 + L2 LINE L2 3161 3309 -4 221 0 35 0 chr2 195186206 195186235 -58070348 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 231 238 165 67 chr2 195186424 195186494 -58070089 + MIR SINE MIR 28 90 -172 2192 108 3 19 chr2 195186494 195186808 -58069775 - AluSc SINE Alu 0 309 1 231 238 165 67 chr2 195186808 195186901 -58069682 + MIR SINE MIR 90 207 -55 200 229 0 21 chr2 195186916 195186964 -58069619 + (TATG)n Simple_repeat Simple_repeat 2 48 0 310 233 29 29 chr2 195187772 195187875 -58068708 - LTR67 LTR ERVL -23 534 432 2919 166 41 4 chr2 195188192 195188681 -58067902 + MER1A DNA MER1_type 4 510 -19 228 286 0 26 chr2 195188788 195188865 -58067718 + MIR SINE MIR 69 143 -119 3228 144 74 55 chr2 195188932 195189110 -58067473 - LTR8A LTR ERV1 0 727 554 5033 187 104 107 chr2 195189110 195190870 -58065713 - MER52A LTR ERV1 0 1755 1 3228 144 74 55 chr2 195190870 195191404 -58065179 - LTR8A LTR ERV1 -173 554 1 365 358 43 27 chr2 195191899 195192156 -58064427 + MIR SINE MIR 2 262 0 252 0 0 0 chr2 195192204 195192232 -58064351 + (TG)n Simple_repeat Simple_repeat 1 28 0 198 0 0 0 chr2 195192233 195192255 -58064328 + (GA)n Simple_repeat Simple_repeat 1 22 0 234 0 0 0 chr2 195192311 195192337 -58064246 + (T)n Simple_repeat Simple_repeat 1 26 0 356 239 195 19 chr2 195192681 195192840 -58063743 - MIR SINE MIR -50 212 26 1599 175 52 0 chr2 195193016 195193307 -58063276 - AluJo SINE Alu -6 306 1 1047 277 177 83 chr2 195193578 195194382 -58062201 - MER52A LTR ERV1 -225 1530 652 6341 143 57 24 chr2 195194518 195195710 -58060873 - Tigger3b DNA MER2_type 0 1231 1 1262 158 37 0 chr2 195196280 195196495 -58060088 - MLT1A1 LTR MaLR 0 365 143 24 32 0 0 chr2 195196921 195196952 -58059631 + AT_rich Low_complexity Low_complexity 1 31 0 389 312 123 39 chr2 195197115 195197904 -58058679 + L1ME4a LINE L1 5265 6119 -2 21 57 0 0 chr2 195198770 195198805 -58057778 + AT_rich Low_complexity Low_complexity 1 35 0 2256 112 3 0 chr2 195200195 195200491 -58056092 - AluSp SINE Alu -16 297 1 1956 129 4 0 chr2 195200495 195200767 -58055816 - AluSx SINE Alu -11 301 29 534 298 123 51 chr2 195202032 195202562 -58054021 - MLT1K LTR MaLR -8 580 13 24 0 0 0 chr2 195203157 195203181 -58053402 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr2 195203233 195203262 -58053321 + AT_rich Low_complexity Low_complexity 1 29 0 1926 152 3 3 chr2 195203591 195203888 -58052695 - AluJb SINE Alu -15 297 1 905 196 208 28 chr2 195204222 195204477 -58052106 + LTR16C LTR ERVL 191 491 0 281 187 520 0 chr2 195204732 195204855 -58051728 + MER3 DNA MER1_type 23 209 0 229 279 49 0 chr2 195204808 195204869 -58051714 - MER3 DNA MER1_type -115 94 31 * 285 260 156 31 chr2 195205346 195205538 -58051045 + L2 LINE L2 2844 3059 -254 239 315 14 0 chr2 195205682 195205755 -58050828 + L2 LINE L2 3239 3312 -1 403 323 93 48 chr2 195207547 195207965 -58048618 - MLT1K LTR MaLR -62 526 90 332 339 89 0 chr2 195208126 195208238 -58048345 + MIR SINE MIR 31 152 -56 1300 137 0 0 chr2 195208808 195208998 -58047585 - AluSg SINE Alu -6 306 117 323 204 23 45 chr2 195209156 195209244 -58047339 - Charlie7 DNA MER1_type -317 2295 2210 1024 104 0 0 chr2 195209244 195209378 -58047205 - AluSg SINE Alu -176 134 1 379 307 85 7 chr2 195209777 195209930 -58046653 + MIR3 SINE MIR 41 205 -3 428 242 39 23 chr2 195209997 195210125 -58046458 - LTR67 LTR ERVL -3 554 425 981 105 8 0 chr2 195210605 195210738 -58045845 - AluSg SINE Alu -176 134 1 379 307 85 7 chr2 195211137 195211290 -58045293 + MIR3 SINE MIR 41 205 -3 861 154 264 0 chr2 195211754 195211936 -58044647 - MER30 DNA MER1_type 0 230 1 231 333 0 12 chr2 195212236 195212317 -58044266 - HAL1 LINE L1 -2214 293 214 434 117 138 43 chr2 195212725 195212819 -58043764 - FLAM_A SINE Alu -15 127 25 726 190 71 22 chr2 195213454 195213638 -58042945 - MLT1B LTR MaLR 0 390 198 2217 241 104 29 chr2 195213656 195214338 -58042245 - MER21B LTR ERV1 -111 752 20 455 163 10 92 chr2 195214339 195214437 -58042146 - MER21B LTR ERV1 -759 104 15 647 302 69 13 chr2 195215150 195215382 -58041201 - MIR SINE MIR -17 245 1 4931 131 59 50 chr2 195215703 195216308 -58040275 - L1MA3 LINE L1 0 6305 5707 257 211 0 0 chr2 195216308 195216360 -58040223 + MER9 LTR ERVK 460 511 0 4931 131 59 50 chr2 195216360 195217193 -58039390 - L1MA3 LINE L1 -598 5707 4770 21 71 0 0 chr2 195217426 195217468 -58039115 + AT_rich Low_complexity Low_complexity 1 42 0 246 258 0 0 chr2 195217685 195217751 -58038832 - MLT1I LTR MaLR -26 383 318 21 71 0 0 chr2 195218347 195218389 -58038194 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr2 195220554 195220577 -58036006 + AT_rich Low_complexity Low_complexity 1 23 0 225 0 0 0 chr2 195221488 195221513 -58035070 + (T)n Simple_repeat Simple_repeat 1 25 0 21 0 0 0 chr2 195222953 195222974 -58033609 + AT_rich Low_complexity Low_complexity 1 21 0 1321 294 53 2 chr2 195226079 195226497 -58030086 + L1M4c LINE L1 350 788 -5515 475 294 21 26 chr2 195226506 195226700 -58029883 + L1M4c LINE L1 658 850 -5453 1790 251 71 68 chr2 195226733 195226977 -58029606 + L1M4c LINE L1 1136 1378 -5004 1767 158 90 80 chr2 195226977 195227401 -58029182 - MSTA LTR MaLR 0 428 1 1790 251 71 68 chr2 195227401 195227786 -58028797 + L1M4c LINE L1 1378 1760 -4622 324 210 0 11 chr2 195227786 195227883 -58028700 - Tigger5 DNA MER2_type 0 2323 1 1790 251 71 68 chr2 195227883 195228440 -58028143 + L1M4c LINE L1 1760 2451 -3931 10966 125 127 5 chr2 195228452 195230424 -58026159 + L1PBa LINE L1 3 2215 -4648 3734 104 29 12 chr2 195230427 195230646 -58025937 + L1PB1 LINE L1 5563 5777 -374 2144 121 53 31 chr2 195230646 195231002 -58025581 - THE1B LTR MaLR 0 364 1 3734 104 29 12 chr2 195231002 195231361 -58025222 + L1PB1 LINE L1 5777 6151 0 6647 210 71 32 chr2 195231363 195232090 -58024493 + L1M4c LINE L1 2431 3128 -3254 2426 97 0 0 chr2 195232090 195232401 -58024182 + AluY SINE Alu 1 311 0 6647 210 71 32 chr2 195232401 195233757 -58022826 + L1M4c LINE L1 3128 4595 -1787 1944 185 48 32 chr2 195233859 195234520 -58022063 + MER61-int LTR ERV1 3622 5217 0 2683 36 6 0 chr2 195236655 195236989 -58019594 - LTR13 LTR ERVK -671 336 1 294 275 73 8 chr2 195238465 195238712 -58017871 + L1M3a LINE L1 2409 2671 -3711 226 306 0 0 chr2 195238904 195238989 -58017594 + L1MD3 LINE L1 7690 7774 -221 237 108 0 0 chr2 195239024 195239061 -58017522 + (A)n Simple_repeat Simple_repeat 1 37 0 1552 231 60 2 chr2 195239071 195239469 -58017114 - MER4D LTR ERV1 -5 898 478 608 171 6 98 chr2 195239470 195239634 -58016949 - MER4D LTR ERV1 -616 287 139 3789 162 36 9 chr2 195239734 195241182 -58015401 + L1MA8 LINE L1 4779 6268 -259 9194 205 39 39 chr2 195241182 195243314 -58013269 + L1M2c LINE L1 2 2132 -4657 218 53 107 38 chr2 195243496 195243627 -58012956 + (TTATA)n Simple_repeat Simple_repeat 5 144 0 180 85 85 0 chr2 195243778 195243825 -58012758 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 30 0 0 0 chr2 195244114 195244144 -58012439 + AT_rich Low_complexity Low_complexity 1 30 0 9118 184 26 7 chr2 195244146 195246986 -58009597 - L1PA15 LINE L1 -22 7581 4706 5892 241 42 35 chr2 195247094 195250309 -58006274 - L1PA15 LINE L1 -3778 3806 6 265 127 95 0 chr2 195250349 195250412 -58006171 - MER69 DNA AcHobo -284 2242 2174 379 339 12 6 chr2 195250520 195250691 -58005892 - MER69 DNA AcHobo -1957 569 398 682 258 99 4 chr2 195250704 195250956 -58005627 - MER69 DNA AcHobo -950 276 1 323 255 108 73 chr2 195250956 195251215 -58005368 - L2 LINE L2 -652 2662 2395 236 201 29 151 chr2 195251734 195251873 -58004710 + MIR SINE MIR 79 200 -62 24 67 0 0 chr2 195252366 195252411 -58004172 + AT_rich Low_complexity Low_complexity 1 45 0 267 320 184 8 chr2 195252778 195252903 -58003680 + MER5A DNA MER1_type 41 187 -2 25 0 0 0 chr2 195253939 195253964 -58002619 + AT_rich Low_complexity Low_complexity 1 25 0 486 204 0 0 chr2 195254098 195254211 -58002372 + (CA)n Simple_repeat Simple_repeat 2 114 0 637 238 0 0 chr2 195254217 195254339 -58002244 - FLAM_C SINE Alu -21 122 1 26 30 0 0 chr2 195254748 195254781 -58001802 + AT_rich Low_complexity Low_complexity 1 33 0 12853 158 35 60 chr2 195254928 195255325 -58001258 + L1P LINE L1 13 418 -5728 183 42 0 0 chr2 195255325 195255349 -58001234 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 12853 158 35 60 chr2 195255349 195258057 -57998526 + L1P LINE L1 418 3042 -3104 11123 78 19 19 chr2 195258158 195258409 -57998174 - L1P3 LINE L1 -550 5604 5355 2185 126 3 0 chr2 195258409 195258711 -57997872 - AluSg SINE Alu -7 303 1 11123 78 19 19 chr2 195258711 195260360 -57996223 - L1P3 LINE L1 -799 5355 3691 481 192 0 0 chr2 195260558 195260636 -57995947 - FRAM SINE Alu -25 151 74 227 54 27 0 chr2 195310827 195310864 -57945719 + (TA)n Simple_repeat Simple_repeat 1 38 0 29 0 0 0 chr2 195311096 195311125 -57945458 + AT_rich Low_complexity Low_complexity 1 29 0 184 75 25 25 chr2 195311426 195311466 -57945117 + (TAAAA)n Simple_repeat Simple_repeat 1 40 0 328 71 88 9 chr2 195311897 195312010 -57944573 + (TA)n Simple_repeat Simple_repeat 2 123 0 31 0 0 0 chr2 195312562 195312593 -57943990 + AT_rich Low_complexity Low_complexity 1 31 0 23 33 0 0 chr2 195313190 195313220 -57943363 + AT_rich Low_complexity Low_complexity 1 30 0 233 283 158 25 chr2 195314658 195314898 -57941685 + L1ME LINE L1 5545 5816 -305 21 36 0 0 chr2 195315083 195315111 -57941472 + AT_rich Low_complexity Low_complexity 1 28 0 225 308 13 0 chr2 195315751 195315829 -57940754 - MER116 DNA Mariner 0 80 2 241 189 57 19 chr2 195315834 195315887 -57940696 + L2 LINE L2 3251 3305 -8 543 208 4 0 chr2 195315901 195316019 -57940564 + Charlie5 DNA MER1_type 1 101 -2511 1514 158 96 6 chr2 195316027 195316382 -57940201 + Charlie5 DNA MER1_type 2234 2620 0 27 0 0 0 chr2 195318377 195318404 -57938179 + AT_rich Low_complexity Low_complexity 1 27 0 28 0 0 0 chr2 195318858 195318886 -57937697 + AT_rich Low_complexity Low_complexity 1 28 0 4941 150 12 38 chr2 195319070 195320367 -57936216 + L1PB4 LINE L1 4864 6126 -30 187 263 92 40 chr2 195322803 195322879 -57933704 - L2 LINE L2 -8 3264 3185 226 81 27 0 chr2 195322909 195322946 -57933637 + Alu SINE Alu 144 181 -121 369 43 0 0 chr2 195322967 195323014 -57933569 + (TC)n Simple_repeat Simple_repeat 2 48 0 243 0 0 0 chr2 195323013 195323040 -57933543 + (TG)n Simple_repeat Simple_repeat 2 28 0 * 21 36 0 0 chr2 195323621 195323649 -57932934 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr2 195323952 195323982 -57932601 + AT_rich Low_complexity Low_complexity 1 30 0 2102 137 0 3 chr2 195324446 195324752 -57931831 + AluJb SINE Alu 1 305 -7 2210 193 62 42 chr2 195325627 195326010 -57930573 + MER67D LTR ERV1 1 398 -116 656 103 0 0 chr2 195326010 195326107 -57930476 + L1PA7 LINE L1 6057 6153 -1 2210 193 62 42 chr2 195326107 195326227 -57930356 + MER67D LTR ERV1 398 514 0 441 272 118 36 chr2 195326529 195326861 -57929722 + MLT1E2 LTR MaLR 1 343 -281 1711 237 6 3 chr2 195327028 195327382 -57929201 + MLT1E2 LTR MaLR 270 624 -2 231 326 32 0 chr2 195327524 195327619 -57928964 - LTR67 LTR ERVL -28 529 432 964 305 93 9 chr2 195328040 195328578 -57928005 + HAL1 LINE L1 1096 1678 -829 472 293 64 56 chr2 195328628 195328987 -57927596 - HAL1b LINE L1 -621 727 366 1312 146 55 5 chr2 195330082 195330301 -57926282 + MER30 DNA MER1_type 1 230 0 1766 156 3 26 chr2 195330473 195330781 -57925802 - AluJo SINE Alu -11 301 1 608 346 12 8 chr2 195330886 195331126 -57925457 + L3 LINE CR1 1332 1572 -5 327 65 0 0 chr2 195331765 195331811 -57924772 + (TG)n Simple_repeat Simple_repeat 2 47 0 1351 196 4 11 chr2 195331875 195332141 -57924442 - L1PA16 LINE L1 -9 6157 5894 1965 113 0 10 chr2 195332250 195332552 -57924031 - L1PA16 LINE L1 -286 5880 5582 2102 116 3 10 chr2 195333490 195333791 -57922792 - AluSc SINE Alu -10 299 1 2174 291 85 54 chr2 195334260 195335521 -57921062 + HAL1 LINE L1 17 1316 -1191 348 24 0 0 chr2 195335726 195335767 -57920816 + (TG)n Simple_repeat Simple_repeat 1 41 0 462 195 16 8 chr2 195335767 195335895 -57920688 + GA-rich Low_complexity Low_complexity 2 130 0 526 217 17 0 chr2 195335899 195336014 -57920569 + HAL1 LINE L1 1475 1591 -916 645 174 8 8 chr2 195336014 195336135 -57920448 + L1PA15 LINE L1 6030 6150 -15 198 236 0 0 chr2 195337190 195337245 -57919338 + (TA)n Simple_repeat Simple_repeat 2 56 0 240 342 45 18 chr2 195337262 195337373 -57919210 + L2 LINE L2 3196 3309 -4 460 330 96 62 chr2 195337520 195337874 -57918709 - L2 LINE L2 -918 2396 2009 2218 97 3 16 chr2 195337874 195338184 -57918399 + AluSc SINE Alu 4 309 0 460 330 96 62 chr2 195338184 195338472 -57918111 - L2 LINE L2 -1305 2009 1732 556 296 74 30 chr2 195338521 195338818 -57917765 + Charlie2 DNA MER1_type 1 310 -2552 1018 204 105 38 chr2 195338827 195339170 -57917413 + Charlie2 DNA MER1_type 1857 2222 -640 296 245 82 41 chr2 195339561 195339659 -57916924 + L2 LINE L2 3208 3309 -4 31 0 0 0 chr2 195339921 195339952 -57916631 + AT_rich Low_complexity Low_complexity 1 31 0 850 314 57 58 chr2 195340231 195340680 -57915903 - MLT1K LTR MaLR 0 588 139 1338 188 5 117 chr2 195340680 195341089 -57915494 - MLT1A1 LTR MaLR 0 365 3 850 314 57 58 chr2 195341089 195341135 -57915448 - MLT1K LTR MaLR -449 139 94 274 268 37 79 chr2 195341201 195341425 -57915158 - MLT1J LTR MaLR -105 345 137 1595 204 14 17 chr2 195343596 195343940 -57912643 - L1ME1 LINE L1 -2 6164 5822 396 149 25 41 chr2 195343943 195344064 -57912519 + CT-rich Low_complexity Low_complexity 3 121 0 2230 87 3 0 chr2 195344144 195344444 -57912139 + AluSc SINE Alu 5 305 -4 242 159 0 23 chr2 195344445 195344489 -57912094 + MLT1L LTR MaLR 146 188 -427 276 237 105 26 chr2 195344783 195344897 -57911686 + MLT1L LTR MaLR 489 611 -4 22 88 0 0 chr2 195345707 195345764 -57910819 + AT_rich Low_complexity Low_complexity 1 57 0 197 260 55 55 chr2 195346310 195346383 -57910200 - MIR SINE MIR -131 131 59 662 318 59 9 chr2 195346794 195347014 -57909569 - MIR SINE MIR -12 250 20 2459 63 0 0 chr2 195347649 195347948 -57908635 - AluY SINE Alu -12 299 1 1916 140 31 17 chr2 195348035 195348386 -57908197 - L1MB1 LINE L1 -40 6128 5773 9996 196 95 69 chr2 195348398 195348570 -57908013 - L1MA8 LINE L1 -5 6110 5944 7965 124 45 0 chr2 195348570 195349814 -57906769 - HSMAR2 DNA Mariner -1 1301 2 2290 93 0 3 chr2 195349816 195350117 -57906466 + AluY SINE Alu 1 300 -11 9996 196 95 69 chr2 195350117 195352782 -57903801 - L1MA8 LINE L1 -171 5944 3349 2065 120 28 0 chr2 195352782 195353073 -57903510 - AluSq SINE Alu -12 301 3 9996 196 95 69 chr2 195353073 195353905 -57902678 - L1MA8 LINE L1 -2766 3349 2540 509 0 16 0 chr2 195353905 195353966 -57902617 + (TAGA)n Simple_repeat Simple_repeat 2 63 0 9996 196 95 69 chr2 195353966 195356261 -57900322 - L1MA8 LINE L1 -3575 2540 295 1025 314 28 43 chr2 195356380 195356778 -57899805 - L1MA8 LINE L1 -5497 394 3 788 317 27 9 chr2 195357523 195357854 -57898729 + MER102b DNA MER1_type 2 338 -3 221 354 0 0 chr2 195359265 195359347 -57897236 + (CATATA)n Simple_repeat Simple_repeat 5 86 0 243 279 39 8 chr2 195359355 195359484 -57897099 - L1ME LINE L1 -227 5894 5762 192 217 0 0 chr2 195360224 195360270 -57896313 + CT-rich Low_complexity Low_complexity 4 49 0 209 227 0 27 chr2 195361668 195361743 -57894840 + CT-rich Low_complexity Low_complexity 3 75 0 189 0 0 0 chr2 195362256 195362277 -57894306 + (TG)n Simple_repeat Simple_repeat 2 22 0 409 269 91 0 chr2 195362685 195362851 -57893732 - MIR SINE MIR -48 214 30 382 207 156 22 chr2 195363608 195363743 -57892840 - MIR SINE MIR 0 262 110 27 81 0 0 chr2 195364393 195364455 -57892128 + AT_rich Low_complexity Low_complexity 1 62 0 24 91 0 0 chr2 195366233 195366299 -57890284 + AT_rich Low_complexity Low_complexity 1 66 0 727 226 73 0 chr2 195366648 195366812 -57889771 + MER5B DNA MER1_type 1 176 -2 298 356 137 15 chr2 195367218 195367547 -57889036 + L2 LINE L2 2366 2734 -580 1593 167 7 31 chr2 195367588 195367834 -57888749 + AluSx SINE Alu 2 241 -71 1760 209 58 80 chr2 195367834 195368460 -57888123 - LTR9 LTR ERV1 0 612 1 1593 167 7 31 chr2 195368460 195368506 -57888077 + AluSx SINE Alu 241 287 -25 336 312 130 99 chr2 195368632 195368956 -57887627 + L2 LINE L2 2935 3268 -4 232 337 47 12 chr2 195369282 195369368 -57887215 + MIR SINE MIR 16 104 -158 2063 113 0 7 chr2 195369382 195369699 -57886884 - AluSg SINE Alu 0 315 1 37768 85 9 16 chr2 195369717 195375908 -57880675 - L1PA6 LINE L1 -1 6153 11 328 320 49 0 chr2 195375921 195376043 -57880540 + MIR SINE MIR 119 246 -16 1631 160 181 11 chr2 195377857 195378232 -57878351 - L1PB3 LINE L1 0 6154 5716 25 51 0 0 chr2 195378340 195378379 -57878204 + AT_rich Low_complexity Low_complexity 1 39 0 21 36 0 0 chr2 195378945 195378973 -57877610 + AT_rich Low_complexity Low_complexity 1 28 0 199 257 105 95 chr2 195380087 195380192 -57876391 + L2 LINE L2 3208 3313 0 204 125 0 0 chr2 195380486 195380518 -57876065 + (TA)n Simple_repeat Simple_repeat 1 32 0 220 370 129 26 chr2 195381603 195381914 -57874669 - L2 LINE L2 -571 2743 2401 23 0 0 0 chr2 195382427 195382450 -57874133 + AT_rich Low_complexity Low_complexity 1 23 0 2165 122 0 28 chr2 195383302 195383623 -57872960 - AluJb SINE Alu 0 312 1 893 250 130 0 chr2 195383912 195384120 -57872463 + MIR SINE MIR 28 262 0 236 123 35 70 chr2 195384408 195384465 -57872118 + L1MCa LINE L1 1113 1167 -5259 246 307 78 51 chr2 195384492 195384785 -57871798 - L2 LINE L2 -161 3111 2811 2090 104 4 0 chr2 195385853 195386168 -57870415 + AluSg SINE Alu 2 317 0 296 260 178 27 chr2 195387075 195387221 -57869362 + L2 LINE L2 3116 3283 -30 832 313 86 39 chr2 195387365 195387854 -57868729 + L2 LINE L2 1614 2125 -1189 2052 130 10 3 chr2 195387857 195388150 -57868433 + AluSx SINE Alu 1 295 -17 2505 62 0 0 chr2 195389001 195389305 -57867278 + AluY SINE Alu 1 304 -7 21 71 0 0 chr2 195389305 195389347 -57867236 + AT_rich Low_complexity Low_complexity 1 42 0 209 139 23 0 chr2 195389432 195389475 -57867108 + (CA)n Simple_repeat Simple_repeat 2 45 0 1963 112 84 0 chr2 195389716 195390003 -57866580 + AluSx SINE Alu 1 311 -1 23 54 0 0 chr2 195390055 195390092 -57866491 + AT_rich Low_complexity Low_complexity 1 37 0 2095 194 65 2 chr2 195390155 195390556 -57866027 - MSTB LTR MaLR 0 426 1 262 114 0 0 chr2 195392312 195392347 -57864236 + Charlie3 DNA MER1_type 2668 2702 -8 512 325 63 24 chr2 195393031 195393286 -57863297 - ERVL LTR ERVL -1562 4202 3938 1176 187 33 27 chr2 195394279 195394579 -57862004 - L1MB8 LINE L1 0 6178 5877 1805 134 3 14 chr2 195394685 195394977 -57861606 - AluSp SINE Alu 0 313 25 204 162 27 0 chr2 195395068 195395105 -57861478 + GA-rich Low_complexity Low_complexity 2 39 0 1420 113 0 0 chr2 195395226 195395420 -57861163 + AluSg/x SINE Alu 108 301 -9 334 257 119 0 chr2 195395536 195395637 -57860946 - MIR SINE MIR -27 235 123 21 0 0 0 chr2 195395652 195395673 -57860910 + AT_rich Low_complexity Low_complexity 1 21 0 1506 188 0 22 chr2 195395673 195395945 -57860638 - AluJo SINE Alu -44 268 3 6757 18 0 1 chr2 195396298 195397076 -57859507 + L1PA2 LINE L1 5379 6155 0 2261 93 0 19 chr2 195397117 195397430 -57859153 + AluY SINE Alu 1 307 -4 459 278 136 24 chr2 195397647 195397697 -57858886 - MER5A DNA MER1_type -1 188 145 191 36 36 0 chr2 195397697 195397725 -57858858 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 459 278 136 24 chr2 195397725 195397843 -57858740 - MER5A DNA MER1_type -44 145 1 219 69 0 0 chr2 195398237 195398266 -57858317 + (TA)n Simple_repeat Simple_repeat 1 29 0 2186 123 0 0 chr2 195398808 195399108 -57857475 + AluSx SINE Alu 1 300 -12 1315 141 13 43 chr2 195399347 195399581 -57857002 - LTR9B LTR ERV1 -128 516 290 24 0 0 0 chr2 195399976 195400000 -57856583 + AT_rich Low_complexity Low_complexity 1 24 0 25 31 0 0 chr2 195400093 195400125 -57856458 + AT_rich Low_complexity Low_complexity 1 32 0 214 137 20 59 chr2 195400674 195400725 -57855858 + L2 LINE L2 3264 3312 -1 1612 112 21 0 chr2 195400855 195401128 -57855455 + AluSp SINE Alu 47 324 0 192 296 112 32 chr2 195402171 195402296 -57854287 + MIR SINE MIR 19 153 -109 231 88 0 0 chr2 195402671 195402705 -57853878 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 775 149 40 20 chr2 195402705 195402853 -57853730 - L1PA16 LINE L1 -12 6154 6004 330 330 68 59 chr2 195403756 195403773 -57852810 - L1MEc LINE L1 -4181 2215 2200 4687 124 71 11 chr2 195403773 195404606 -57851977 - L1MA4 LINE L1 -6 6294 5412 330 330 68 59 chr2 195404606 195404943 -57851640 - L1MEc LINE L1 -4196 2200 1858 194 327 0 0 chr2 195405297 195405349 -57851234 - MIR SINE MIR -120 142 91 2307 62 69 0 chr2 195405526 195405817 -57850766 + AluY SINE Alu 1 311 0 24 0 0 0 chr2 195405865 195405889 -57850694 + AT_rich Low_complexity Low_complexity 1 24 0 1897 168 28 15 chr2 195406312 195406652 -57849931 + MER39B LTR ERV1 226 653 0 21 57 0 0 chr2 195407481 195407516 -57849067 + AT_rich Low_complexity Low_complexity 1 35 0 283 268 203 16 chr2 195408000 195408123 -57848460 + MIR SINE MIR 1 146 -116 22 0 0 0 chr2 195408558 195408580 -57848003 + AT_rich Low_complexity Low_complexity 1 22 0 23 101 0 0 chr2 195408674 195408753 -57847830 + AT_rich Low_complexity Low_complexity 1 79 0 300 288 103 27 chr2 195409393 195409577 -57847006 - L1ME LINE L1 -301 5820 5623 23 0 0 0 chr2 195410068 195410091 -57846492 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr2 195410557 195410589 -57845994 + AT_rich Low_complexity Low_complexity 1 32 0 335 281 22 0 chr2 195410949 195411038 -57845545 - L2 LINE L2 0 3313 3223 410 357 18 12 chr2 195412678 195412846 -57843737 + L2 LINE L2 3103 3271 -1 21 57 0 0 chr2 195412978 195413013 -57843570 + AT_rich Low_complexity Low_complexity 1 35 0 2202 107 0 0 chr2 195413236 195413553 -57843030 - AluSx SINE Alu 0 317 1 28 61 0 0 chr2 195413699 195413748 -57842835 + AT_rich Low_complexity Low_complexity 1 49 0 647 169 50 129 chr2 195414539 195414818 -57841765 + L1MD2 LINE L1 6103 6359 0 282 290 32 11 chr2 195414884 195414977 -57841606 + MIR3 SINE MIR 89 183 -25 372 328 113 0 chr2 195415469 195415655 -57840928 - MIR SINE MIR -55 207 1 633 281 109 40 chr2 195415687 195415961 -57840622 - MLT1J LTR MaLR -212 299 7 325 243 0 0 chr2 195415980 195416054 -57840529 + MIR SINE MIR 81 154 -108 1865 165 0 0 chr2 195416054 195416339 -57840244 + AluJb SINE Alu 17 301 -11 2189 127 0 0 chr2 195416510 195416810 -57839773 + AluSx SINE Alu 1 300 -12 271 256 11 44 chr2 195417295 195417385 -57839198 + MER4B-int LTR ERV1 5049 5135 -1623 1119 214 27 96 chr2 195417398 195417730 -57838853 + MER4B-int LTR ERV1 2323 2631 -1560 2047 121 17 0 chr2 195417756 195418046 -57838537 + AluSx SINE Alu 1 295 -17 34 0 0 0 chr2 195418046 195418080 -57838503 + AT_rich Low_complexity Low_complexity 1 34 0 1998 282 49 16 chr2 195418228 195418898 -57837685 + MER115 DNA AcHobo 2 693 0 1905 143 3 3 chr2 195418918 195419204 -57837379 - AluSx SINE Alu -26 286 1 520 122 24 0 chr2 195419297 195419379 -57837204 + AluS SINE Alu 2 85 -228 2196 111 7 3 chr2 195419566 195419863 -57836720 - AluSq SINE Alu -15 298 1 2002 117 4 0 chr2 195420075 195420340 -57836243 + AluSx SINE Alu 38 303 -9 1800 147 7 27 chr2 195420458 195420758 -57835825 + AluJb SINE Alu 1 294 -18 251 291 160 63 chr2 195420772 195421198 -57835385 - LTR67 LTR ERVL -80 477 11 2120 109 10 0 chr2 195421359 195421661 -57834922 - MER57B LTR ERV1 0 434 130 1256 214 67 18 chr2 195421706 195422048 -57834535 - L1MB7 LINE L1 -1 6183 5825 552 246 16 0 chr2 195422741 195422863 -57833720 + FLAM_A SINE Alu 1 124 -9 355 142 0 12 chr2 195422974 195423037 -57833546 + MER5B DNA MER1_type 1 72 -117 2044 115 14 4 chr2 195423040 195423352 -57833231 + AluSx SINE Alu 1 315 0 1667 187 10 23 chr2 195423364 195423669 -57832914 + AluJb SINE Alu 1 301 -11 775 233 108 78 chr2 195423703 195424180 -57832403 - MLT1C LTR MaLR 0 505 1 858 205 47 0 chr2 195424228 195424399 -57832184 - AluJb SINE Alu -14 298 120 283 167 0 0 chr2 195424399 195424447 -57832136 + MER5B DNA MER1_type 131 178 0 1581 166 28 14 chr2 195424668 195424958 -57831625 - AluJo SINE Alu -4 308 15 421 323 19 6 chr2 195424997 195425158 -57831425 + MIR SINE MIR 1 163 -99 2521 282 42 22 chr2 195425158 195425294 -57831289 + MER21-int LTR ERV1 151 283 -3908 2209 113 0 17 chr2 195425294 195425596 -57830987 - AluSx SINE Alu -15 297 1 2521 282 42 22 chr2 195425596 195426243 -57830340 + MER21-int LTR ERV1 283 950 -3241 1897 191 16 76 chr2 195426257 195426558 -57830025 - MER41B LTR ERV1 -10 606 372 8144 7 0 0 chr2 195426558 195427645 -57828938 - L1PA2 LINE L1 0 6155 5067 1897 191 16 76 chr2 195427645 195427836 -57828747 - MER41B LTR ERV1 -244 372 171 2274 77 13 10 chr2 195427838 195428136 -57828447 - AluY SINE Alu -12 299 1 1240 251 36 66 chr2 195428225 195428451 -57828132 + MER21-int LTR ERV1 1213 1444 -5314 2132 141 0 0 chr2 195428451 195428748 -57827835 + AluSx SINE Alu 1 297 -15 1240 251 36 66 chr2 195428748 195429024 -57827559 + MER21-int LTR ERV1 1444 4450 -2308 898 245 20 5 chr2 195429222 195429422 -57827161 + MER21-int LTR ERV1 1673 1875 -2316 2180 128 3 0 chr2 195429615 195429919 -57826664 + AluSx SINE Alu 1 305 -7 1033 144 35 12 chr2 195429921 195430094 -57826489 + AluSg/x SINE Alu 134 310 0 2238 105 7 13 chr2 195430751 195431055 -57825528 - AluSq SINE Alu -11 302 1 1389 267 17 67 chr2 195431175 195431366 -57825217 + MER21-int LTR ERV1 2428 2627 -1564 2285 92 17 0 chr2 195431366 195431658 -57824925 + AluSp SINE Alu 1 297 -16 1389 267 17 67 chr2 195431658 195431931 -57824652 + MER21-int LTR ERV1 2627 2869 -1322 1233 144 6 0 chr2 195432044 195432224 -57824359 + AluSg/x SINE Alu 85 265 -45 573 199 92 8 chr2 195432348 195432479 -57824104 + AluJb SINE Alu 154 295 -17 1858 125 11 0 chr2 195432481 195432745 -57823838 + AluSg SINE Alu 1 267 -43 441 0 0 0 chr2 195432757 195432806 -57823777 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 1565 178 38 20 chr2 195432961 195433254 -57823329 - AluJb SINE Alu -14 298 1 1444 107 0 0 chr2 195433365 195433561 -57823022 - AluSg/x SINE Alu -6 306 111 286 231 0 0 chr2 195433561 195433613 -57822970 - AluJ/monomer SINE Alu -250 52 1 1882 151 0 27 chr2 195433672 195433964 -57822619 - AluSx SINE Alu -24 288 5 1502 208 61 0 chr2 195434452 195434567 -57822016 + AluJb SINE Alu 1 108 -204 351 0 0 0 chr2 195434567 195434606 -57821977 + (CAA)n Simple_repeat Simple_repeat 1 39 0 1502 208 61 0 chr2 195434606 195434769 -57821814 + AluJb SINE Alu 108 296 -16 234 0 0 0 chr2 195434914 195434940 -57821643 + (T)n Simple_repeat Simple_repeat 1 26 0 600 151 0 0 chr2 195434943 195435036 -57821547 - AluSq SINE Alu -87 226 134 1399 89 0 0 chr2 195435036 195435216 -57821367 - AluY SINE Alu 0 311 132 213 39 0 0 chr2 195435216 195435242 -57821341 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1296 26 7 0 chr2 195435242 195435394 -57821189 - L1PA3 LINE L1 -10 6145 5993 1294 95 37 5 chr2 195435394 195435583 -57821000 - AluY SINE Alu -26 285 91 4697 117 20 116 chr2 195435583 195437039 -57819544 + pTR5 LTR ERV1 783 2606 0 948 98 0 0 chr2 195437040 195437162 -57819421 - AluY SINE Alu -189 122 1 515 73 0 0 chr2 195437162 195437230 -57819353 - AluSc SINE Alu -176 133 66 1006 161 57 16 chr2 195437230 195437422 -57819161 - AluSx SINE Alu -112 200 1 233 178 0 0 chr2 195437655 195437700 -57818883 - L1ME LINE L1 -394 5770 5726 1389 183 3 61 chr2 195437912 195438224 -57818359 + AluJo SINE Alu 12 305 -7 1920 167 13 0 chr2 195438421 195438727 -57817856 - AluSx SINE Alu -2 310 1 331 257 83 0 chr2 195440223 195440332 -57816251 + MIR SINE MIR 34 151 -111 1848 170 6 6 chr2 195440332 195440643 -57815940 + AluJb SINE Alu 1 311 -1 2035 134 7 3 chr2 195440810 195441117 -57815466 + AluSp SINE Alu 1 308 -5 1676 183 80 51 chr2 195441776 195442064 -57814519 + MER65C LTR ERV1 1 279 -182 1507 183 66 17 chr2 195442064 195442353 -57814230 - AluJb SINE Alu -9 303 1 1676 183 80 51 chr2 195442353 195442466 -57814117 + MER65C LTR ERV1 279 419 -42 1880 174 3 0 chr2 195442466 195442771 -57813812 + AluJo SINE Alu 6 311 -1 1676 183 80 51 chr2 195442771 195442816 -57813767 + MER65C LTR ERV1 419 461 0 1640 113 0 0 chr2 195444287 195444500 -57812083 + AluSg/x SINE Alu 68 280 -30 2006 136 0 4 chr2 195444527 195444807 -57811776 + AluSx SINE Alu 3 281 -31 2108 124 7 3 chr2 195444991 195445289 -57811294 - AluSx SINE Alu -13 299 1 928 205 125 50 chr2 195445491 195445794 -57810789 + MLT1A1 LTR MaLR 33 358 -7 2289 210 38 13 chr2 195445880 195446352 -57810231 - LTR42 LTR ERVL -11 484 1 1140 95 7 0 chr2 195446613 195446761 -57809822 - AluSp SINE Alu -164 149 1 301 256 12 12 chr2 195446802 195446888 -57809695 - L1ME3 LINE L1 -20 6142 6057 501 271 114 51 chr2 195446994 195447465 -57809118 - L1ME3 LINE L1 -391 5771 5303 692 187 0 8 chr2 195447465 195447588 -57808995 + FLAM_C SINE Alu 2 123 -20 310 241 26 0 chr2 195447624 195447740 -57808843 - L1ME3 LINE L1 -834 5312 5194 2225 89 3 24 chr2 195447744 195448037 -57808546 - AluSc SINE Alu -22 287 1 2398 93 3 3 chr2 195448199 195448511 -57808072 - AluSx SINE Alu 0 312 1 285 226 0 0 chr2 195448521 195448574 -57808009 - FLAM SINE Alu -9 124 72 272 227 47 120 chr2 195448625 195448775 -57807808 - MLT1E LTR MaLR -450 143 5 2080 154 0 0 chr2 195449190 195449501 -57807082 - AluSx SINE Alu -1 311 1 189 0 0 0 chr2 195450370 195450391 -57806192 + (TTG)n Simple_repeat Simple_repeat 1 21 0 2090 86 0 0 chr2 195450442 195450698 -57805885 - AluY SINE Alu -55 256 1 536 273 26 0 chr2 195450727 195450881 -57805702 + MER58B DNA MER1_type 181 338 -3 2273 100 17 3 chr2 195451615 195451914 -57804669 + AluSq SINE Alu 2 304 -9 2184 113 3 0 chr2 195457289 195457589 -57798994 - AluSx SINE Alu -11 301 1 5863 88 10 8 chr2 195459506 195462189 -57794394 - L1PA7 LINE L1 0 6154 3386 2404 85 0 22 chr2 195462189 195462507 -57794076 - AluY SINE Alu 0 311 1 5863 88 10 8 chr2 195462507 195462974 -57793609 - L1PA7 LINE L1 -2768 3386 2922 * 12153 105 8 9 chr2 195462966 195464759 -57791824 + L1P LINE L1 1323 3114 -3032 2060 123 20 0 chr2 195465000 195465292 -57791291 + AluSp SINE Alu 1 298 -15 353 328 30 25 chr2 195465653 195465851 -57790732 - MIR SINE MIR -44 218 20 212 161 16 0 chr2 195467743 195467805 -57788778 + (TA)n Simple_repeat Simple_repeat 1 63 0 50 59 0 0 chr2 195468193 195468278 -57788305 + AT_rich Low_complexity Low_complexity 1 85 0 338 61 20 0 chr2 195468950 195468999 -57787584 + (TG)n Simple_repeat Simple_repeat 2 51 0 24 67 0 0 chr2 195469149 195469194 -57787389 + AT_rich Low_complexity Low_complexity 1 45 0 1653 194 4 4 chr2 195471309 195471582 -57785001 + AluJb SINE Alu 3 275 -37 256 317 100 28 chr2 195471598 195471917 -57784666 + L1ME3A LINE L1 2211 2552 -3594 23 0 0 0 chr2 195472002 195472025 -57784558 + AT_rich Low_complexity Low_complexity 1 23 0 1551 241 65 30 chr2 195472077 195472584 -57783999 - L1ME1 LINE L1 -222 6338 5814 1079 231 90 37 chr2 195472597 195473107 -57783476 - L1ME1 LINE L1 -2350 4190 3654 1027 222 111 14 chr2 195473087 195473438 -57783145 - L1ME1 LINE L1 -3194 3346 2962 * 376 304 54 16 chr2 195473443 195473627 -57782956 - L1ME1 LINE L1 -4333 2207 2017 1151 253 54 68 chr2 195473632 195474421 -57782162 - L1ME1 LINE L1 -4870 1670 918 187 53 26 26 chr2 195474557 195474595 -57781988 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 200 297 0 0 chr2 195476930 195476994 -57779589 + CT-rich Low_complexity Low_complexity 1 64 0 294 323 37 62 chr2 195477327 195477649 -57778934 - L1ME1 LINE L1 -6209 331 18 673 309 204 23 chr2 195477677 195478425 -57778158 + L1ME3A LINE L1 2725 3608 -2538 476 222 151 49 chr2 195478433 195478618 -57777965 + MIR SINE MIR 59 262 0 1074 302 134 25 chr2 195478625 195480644 -57775939 + L1ME3A LINE L1 3648 5883 -287 1575 187 33 0 chr2 195480650 195480951 -57775632 + AluJb SINE Alu 2 311 0 2089 99 0 7 chr2 195480954 195481275 -57775308 + AluSg SINE Alu 1 319 0 21 0 0 0 chr2 195481831 195481852 -57774731 + AT_rich Low_complexity Low_complexity 1 21 0 1905 198 51 5 chr2 195482505 195482900 -57773683 + MLT2C2 LTR ERVL 6 418 -46 474 59 12 24 chr2 195482973 195483058 -57773525 + (TCTA)n Simple_repeat Simple_repeat 4 87 0 468 181 52 9 chr2 195483519 195483635 -57772948 - MER65A LTR ERV1 -324 121 1 1397 129 154 43 chr2 195483635 195483960 -57772623 - MER31B LTR ERV1 -105 361 1 804 165 0 0 chr2 195484185 195484312 -57772271 + FRAM SINE Alu 31 157 -19 370 188 0 94 chr2 195485305 195485390 -57771193 + MIR3 SINE MIR 121 197 -11 246 320 96 0 chr2 195485713 195485838 -57770745 + MIR SINE MIR 72 208 -54 401 266 30 40 chr2 195486715 195486914 -57769669 + L2 LINE L2 2680 2876 -438 1407 207 24 58 chr2 195487444 195487820 -57768763 + MLT1A1 LTR MaLR 3 365 0 1993 137 7 0 chr2 195487915 195488208 -57768375 - AluSc SINE Alu -14 295 1 2337 200 13 11 chr2 195488460 195488926 -57767657 - MLT1C LTR MaLR 0 467 1 22 56 0 0 chr2 195489052 195489088 -57767495 + AT_rich Low_complexity Low_complexity 1 36 0 841 285 85 26 chr2 195489179 195489449 -57767134 + MLT1K LTR MaLR 139 424 -164 1996 116 84 32 chr2 195490175 195490519 -57766064 + THE1B LTR MaLR 3 364 0 24 0 0 0 chr2 195490697 195490721 -57765862 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr2 195490931 195490957 -57765626 + AT_rich Low_complexity Low_complexity 1 26 0 24 53 0 0 chr2 195491839 195491877 -57764706 + AT_rich Low_complexity Low_complexity 1 38 0 213 39 0 0 chr2 195492474 195492500 -57764083 + (CAAAC)n Simple_repeat Simple_repeat 2 27 0 24 53 0 0 chr2 195492742 195492780 -57763803 + AT_rich Low_complexity Low_complexity 1 38 0 2799 222 48 56 chr2 195493915 195494585 -57761998 - L1ME2 LINE L1 -9 6155 5488 1541 202 31 0 chr2 195494585 195494877 -57761706 + AluJo SINE Alu 1 301 -11 2799 222 48 56 chr2 195494877 195495408 -57761175 - L1ME2 LINE L1 -676 5488 4954 9410 228 70 55 chr2 195495695 195495875 -57760708 + L1MA4A LINE L1 2 178 -6670 1509 169 103 26 chr2 195495875 195496223 -57760360 - THE1C LTR MaLR 0 375 1 9410 228 70 55 chr2 195496223 195497662 -57758921 + L1MA4A LINE L1 178 1594 -5254 2165 134 0 3 chr2 195497662 195497969 -57758614 + AluSg SINE Alu 1 306 -4 9410 228 70 55 chr2 195497969 195498105 -57758478 + L1MA4A LINE L1 1594 1726 -5122 1911 121 0 4 chr2 195498105 195498370 -57758213 + AluSc SINE Alu 39 302 -7 9410 228 70 55 chr2 195498370 195499658 -57756925 + L1MA4A LINE L1 1726 3116 -3732 294 29 0 0 chr2 195499658 195499693 -57756890 + (TG)n Simple_repeat Simple_repeat 2 36 0 9410 228 70 55 chr2 195499693 195500243 -57756340 + L1MA4A LINE L1 3116 3656 -3192 1515 188 48 40 chr2 195500245 195500617 -57755966 + THE1C LTR MaLR 1 375 0 8105 100 23 192 chr2 195500620 195502512 -57754071 + THE1C-int LTR MaLR 4 1574 -6 2192 126 47 16 chr2 195502513 195502877 -57753706 + THE1C LTR MaLR 1 375 0 5220 174 15 27 chr2 195502877 195503257 -57753326 + L1MA4A LINE L1 4648 5031 -1974 2133 124 0 0 chr2 195503257 195503562 -57753021 - AluSx SINE Alu 0 305 1 5220 174 15 27 chr2 195503562 195505467 -57751116 + L1MA4A LINE L1 5031 7002 -3 1516 193 47 0 chr2 195505471 195505746 -57750837 + AluJb SINE Alu 1 288 -24 22 0 0 0 chr2 195505749 195505771 -57750812 + AT_rich Low_complexity Low_complexity 1 22 0 2298 63 21 0 chr2 195505856 195506143 -57750440 - AluY SINE Alu -18 293 1 348 260 125 24 chr2 195506423 195506631 -57749952 + L1MC5 LINE L1 7452 7680 -281 23 0 0 0 chr2 195506861 195506884 -57749699 + AT_rich Low_complexity Low_complexity 1 23 0 259 255 82 31 chr2 195507447 195507545 -57749038 - MIR SINE MIR -68 194 92 23 92 0 0 chr2 195508450 195508515 -57748068 + AT_rich Low_complexity Low_complexity 1 65 0 974 164 0 0 chr2 195508530 195508682 -57747901 - MER57A LTR ERV1 -251 152 1 1117 144 5 26 chr2 195508685 195508880 -57747703 - MER57A-int LTR ERV1 -5 7532 7342 793 154 82 22 chr2 195508882 195509064 -57747519 - LTR54B LTR ERV1 -303 195 3 7405 189 21 11 chr2 195509064 195510542 -57746041 - MER57A-int LTR ERV1 -390 7147 2453 7670 159 17 40 chr2 195510704 195512284 -57744299 - MER57A-int LTR ERV1 -1716 5821 4278 819 205 54 46 chr2 195512321 195512841 -57743742 - MER57A-int LTR ERV1 -2673 3590 1698 487 230 0 0 chr2 195512953 195513053 -57743530 - MER57A-int LTR ERV1 -2878 3453 3354 377 253 0 0 chr2 195513112 195513203 -57743380 - MER57A-int LTR ERV1 -2993 3338 3248 260 216 27 0 chr2 195513224 195513298 -57743285 - MER57A-int LTR ERV1 -2966 2980 2905 404 238 11 162 chr2 195513312 195513577 -57743006 - MER57A-int LTR ERV1 -3732 1391 1167 370 131 16 0 chr2 195513685 195513746 -57742837 - MER34C LTR ERV1 -369 216 155 408 250 62 35 chr2 195513746 195513797 -57742786 - MER57A-int LTR ERV1 -4135 988 940 2598 123 57 0 chr2 195513797 195514202 -57742381 + MSTA LTR MaLR 1 428 0 408 250 62 35 chr2 195514202 195514294 -57742289 - MER57A-int LTR ERV1 -4183 940 841 1383 164 7 69 chr2 195514363 195514668 -57741915 - MER57A-int LTR ERV1 -6711 826 541 2798 199 19 6 chr2 195514706 195515238 -57741345 - MER57A-int LTR ERV1 -6998 539 1 532 204 0 9 chr2 195515240 195515348 -57741235 - MER57A LTR ERV1 -2 401 295 1549 199 18 6 chr2 195515387 195515723 -57740860 - L1MB3 LINE L1 -14 6169 5830 23 0 0 0 chr2 195516394 195516417 -57740166 + AT_rich Low_complexity Low_complexity 1 23 0 325 355 58 13 chr2 195516493 195516648 -57739935 - L2 LINE L2 -4 3268 3107 270 0 0 0 chr2 195517214 195517244 -57739339 + (TG)n Simple_repeat Simple_repeat 2 31 0 1188 115 0 0 chr2 195517278 195517443 -57739140 - AluSq SINE Alu 0 313 149 304 318 157 34 chr2 195517510 195517746 -57738837 - L2 LINE L2 -166 3106 2842 2337 148 50 2 chr2 195517850 195518249 -57738334 + MSTA LTR MaLR 1 418 -10 188 275 0 0 chr2 195518444 195518484 -57738099 + L2 LINE L2 3269 3308 -5 396 308 116 43 chr2 195518607 195518943 -57737640 - L2 LINE L2 -1152 2162 1787 2109 147 13 31 chr2 195518943 195519325 -57737258 + THE1C LTR MaLR 1 375 0 396 308 116 43 chr2 195519325 195519410 -57737173 - L2 LINE L2 -1527 1787 1710 185 387 16 0 chr2 195519403 195519465 -57737118 + MIR SINE MIR 50 112 -150 * 326 279 58 7 chr2 195519644 195519798 -57736785 + LTR37A LTR ERV1 141 302 -124 4026 251 51 13 chr2 195719801 195720949 -57535634 - L1PA13 LINE L1 -4410 2387 1188 268 329 84 14 chr2 195720961 195721104 -57535479 - L1PA13 LINE L1 -5904 883 731 * 619 195 90 55 chr2 195721096 195721302 -57535281 - L1 LINE L1 -1938 4208 3975 8085 214 51 8 chr2 195721413 195721670 -57534913 - L1P LINE L1 -843 5303 5059 1822 164 29 40 chr2 195721670 195722047 -57534536 + THE1C LTR MaLR 3 375 0 8085 214 51 8 chr2 195722047 195722659 -57533924 - L1P LINE L1 -1087 5059 4475 432 55 0 0 chr2 195722659 195722714 -57533869 + (TG)n Simple_repeat Simple_repeat 1 55 0 8085 214 51 8 chr2 195722714 195723788 -57532795 - L1P LINE L1 -1671 4475 3275 4856 198 16 13 chr2 195723797 195724901 -57531682 + L1 LINE L1 4225 5332 -814 319 227 27 0 chr2 195724902 195724977 -57531606 - L1PA15-16 LINE L1 -4304 2545 2469 12404 113 3 19 chr2 195725121 195727409 -57529174 - HERVL-A2 LTR ERVL -1663 3991 88 2200 146 5 24 chr2 195727409 195727779 -57528804 - THE1B LTR MaLR -1 363 1 12404 113 3 19 chr2 195727779 195727866 -57528717 - HERVL-A2 LTR ERVL -5566 88 1 2065 177 37 27 chr2 195727866 195728408 -57528175 - MLT2A2 LTR ERVL 0 554 3 242 240 156 19 chr2 195728504 195728658 -57527925 - LTR33A LTR ERVL -50 473 299 283 290 131 57 chr2 195728730 195728906 -57527677 - LTR33 LTR ERVL -280 241 53 255 258 28 124 chr2 195729304 195729482 -57527101 + MIR SINE MIR 97 257 -5 22 70 0 0 chr2 195729687 195729730 -57526853 + AT_rich Low_complexity Low_complexity 1 43 0 605 263 244 7 chr2 195729883 195730157 -57526426 - L2 LINE L2 -562 2752 2414 10290 189 26 5 chr2 195730201 195731981 -57524602 + L1PA13 LINE L1 217 2034 -4753 1928 135 13 29 chr2 195731999 195732310 -57524273 + THE1B LTR MaLR 59 364 0 10218 160 10 5 chr2 195732310 195733882 -57522701 + THE1B-int LTR MaLR 1 1580 0 1860 142 84 29 chr2 195733882 195734227 -57522356 + THE1B LTR MaLR 1 364 0 4064 223 29 0 chr2 195734247 195735180 -57521403 + L1PA13 LINE L1 2049 3008 -3789 206 31 0 31 chr2 195735410 195735442 -57521141 + (TA)n Simple_repeat Simple_repeat 2 32 0 24 77 0 0 chr2 195735922 195735974 -57520609 + AT_rich Low_complexity Low_complexity 1 52 0 383 350 115 21 chr2 195737294 195737528 -57519055 - MIR SINE MIR -6 256 1 201 194 28 14 chr2 195737775 195737847 -57518736 + GA-rich Low_complexity Low_complexity 1 73 0 207 275 29 0 chr2 195738100 195738169 -57518414 - MIR SINE MIR -174 88 18 415 305 159 7 chr2 195738262 195738413 -57518170 - MER5A DNA MER1_type -6 183 10 3438 181 93 42 chr2 195738495 195738870 -57517713 + MER21A LTR ERV1 8 363 -568 342 0 0 0 chr2 195738870 195738908 -57517675 + (CAA)n Simple_repeat Simple_repeat 2 39 0 3438 181 93 42 chr2 195738908 195739320 -57517263 + MER21A LTR ERV1 363 835 -96 1345 207 80 91 chr2 195739821 195739874 -57516709 - MLT2B1 LTR ERVL 0 520 468 510 17 0 0 chr2 195739874 195739933 -57516650 + (CA)n Simple_repeat Simple_repeat 2 60 0 1345 207 80 91 chr2 195739933 195740405 -57516178 - MLT2B1 LTR ERVL -52 468 1 452 310 53 26 chr2 195740744 195740970 -57515613 + MIR SINE MIR 5 236 -26 1065 143 11 0 chr2 195742011 195742186 -57514397 + L1P3 LINE L1 1331 1507 -4954 3093 79 0 5 chr2 195742315 195742733 -57513850 - L1P LINE L1 -4179 1967 1552 453 334 39 49 chr2 195742813 195742834 -57513749 + L1MEd LINE L1 913 933 -5186 2016 114 46 0 chr2 195742834 195743114 -57513469 + AluSq SINE Alu 1 293 -20 453 334 39 49 chr2 195743114 195743400 -57513183 + L1MEd LINE L1 933 1217 -4902 334 304 11 35 chr2 195743513 195743723 -57512860 + HAL1b LINE L1 362 1643 -864 1736 153 55 38 chr2 195744262 195744629 -57511954 - THE1C LTR MaLR 0 375 3 2276 134 21 16 chr2 195744741 195745114 -57511469 + THE1C LTR MaLR 1 375 0 1639 178 57 73 chr2 195745222 195745661 -57510922 - MSTB1 LTR MaLR 0 432 1 303 71 0 253 chr2 195746184 195746283 -57510300 + MADE1 DNA Mariner 7 80 0 292 298 179 34 chr2 195746303 195746565 -57510018 - L2 LINE L2 -527 2787 2488 1299 247 44 22 chr2 195746570 195746934 -57509649 - MLT1E3 LTR MaLR -5 619 248 404 132 59 0 chr2 195746934 195747002 -57509581 - THE1B LTR MaLR 0 375 304 1138 88 94 0 chr2 195747003 195747162 -57509421 - THE1B LTR MaLR -190 174 1 1514 61 10 0 chr2 195747162 195747359 -57509224 - THE1B-int LTR MaLR 0 1580 1382 4612 79 5 0 chr2 195747512 195748108 -57508475 + HERVL LTR ERVL 2829 3427 -2227 186 286 221 13 chr2 195749288 195749365 -57507218 + MIR SINE MIR 110 202 -60 196 303 110 28 chr2 195749454 195749563 -57507020 + L2 LINE L2 2172 2289 -1025 253 307 186 42 chr2 195749932 195750196 -57506387 + MLT1K LTR MaLR 281 582 -6 364 374 69 47 chr2 195750211 195750617 -57505966 + L2 LINE L2 2560 2974 -340 247 312 54 21 chr2 195750805 195750898 -57505685 + L2 LINE L2 3177 3272 0 287 344 25 12 chr2 195751857 195752017 -57504566 - L1ME3A LINE L1 -8 6162 6001 301 294 137 7 chr2 195752133 195752279 -57504304 - L1ME3A LINE L1 -219 5951 5787 519 304 63 1 chr2 195752283 195752504 -57504079 - L1ME3A LINE L1 -468 5702 5469 867 262 129 35 chr2 195752638 195753065 -57503518 + MLT1C LTR MaLR 1 467 0 1615 148 0 44 chr2 195753255 195753525 -57503058 + MER1B DNA MER1_type 82 339 0 419 217 0 0 chr2 195753528 195753597 -57502986 - MLT1D LTR MaLR -436 69 1 1887 123 18 4 chr2 195754075 195754352 -57502231 + AluSx SINE Alu 1 281 -31 22 94 0 0 chr2 195755124 195755188 -57501395 + AT_rich Low_complexity Low_complexity 1 64 0 251 54 27 0 chr2 195755200 195755237 -57501346 + (TTA)n Simple_repeat Simple_repeat 3 40 0 7542 26 0 0 chr2 195755237 195756192 -57500391 - L1PA3 LINE L1 -18 6137 5181 3491 176 33 11 chr2 195756380 195757115 -57499468 - L1MC2 LINE L1 -9 6335 5585 21 0 0 0 chr2 195757328 195757349 -57499234 + AT_rich Low_complexity Low_complexity 1 21 0 25 51 0 0 chr2 195758249 195758288 -57498295 + AT_rich Low_complexity Low_complexity 1 39 0 282 296 0 12 chr2 195759291 195759372 -57497211 - LTR33A LTR ERVL 0 523 444 29 0 0 0 chr2 195761167 195761196 -57495387 + AT_rich Low_complexity Low_complexity 1 29 0 619 209 48 111 chr2 195761424 195761620 -57494963 - L1MC2 LINE L1 -2055 4091 3921 1124 48 20 0 chr2 195761620 195761767 -57494816 - L1MA2 LINE L1 0 6304 6155 619 209 48 111 chr2 195761767 195761886 -57494697 - L1MC2 LINE L1 -2225 3921 3796 599 206 137 58 chr2 195762016 195762375 -57494208 - L1MC2 LINE L1 -2990 3156 2770 603 98 22 0 chr2 195762393 195762485 -57494098 - AluY SINE Alu 0 311 218 384 271 57 0 chr2 195762517 195762639 -57493944 - L1MC2 LINE L1 -3392 2754 2626 532 279 113 22 chr2 195762786 195763008 -57493575 - MIR SINE MIR -3 259 18 300 266 37 46 chr2 195763143 195763252 -57493331 - MER58 DNA MER1_type -107 108 1 1378 194 8 4 chr2 195763770 195764023 -57492560 + AluJo SINE Alu 3 256 -56 315 0 0 0 chr2 195764343 195764378 -57492205 + (CA)n Simple_repeat Simple_repeat 2 36 0 200 261 43 0 chr2 195764378 195764410 -57492173 + (TA)n Simple_repeat Simple_repeat 2 31 -66 1869 204 14 6 chr2 195764410 195764772 -57491811 - MLT1A1 LTR MaLR 0 365 1 200 261 43 0 chr2 195764772 195764831 -57491752 + (TA)n Simple_repeat Simple_repeat 31 97 0 2300 54 11 0 chr2 195764947 195765267 -57491316 + AluY SINE Alu 2 324 0 1788 154 3 57 chr2 195765267 195765585 -57490998 + AluSx SINE Alu 3 303 -9 22 35 0 0 chr2 195765825 195765854 -57490729 + AT_rich Low_complexity Low_complexity 1 29 0 1936 137 0 14 chr2 195767010 195767317 -57489266 - AluSg SINE Alu 0 303 1 24 32 0 0 chr2 195767634 195767665 -57488918 + AT_rich Low_complexity Low_complexity 1 31 0 308 323 51 9 chr2 195767814 195768031 -57488552 - L1M4 LINE L1 -3319 2827 2602 332 279 29 39 chr2 195769270 195769374 -57487209 - MER94 DNA DNA -8 126 24 23 0 0 0 chr2 195770587 195770610 -57485973 + AT_rich Low_complexity Low_complexity 1 23 0 201 176 0 0 chr2 195770610 195770644 -57485939 + (TA)n Simple_repeat Simple_repeat 1 34 0 2069 167 17 0 chr2 195771450 195771810 -57484773 - MER47A DNA MER2_type 0 366 1 265 133 0 0 chr2 195772135 195772180 -57484403 - L2 LINE L2 0 3313 3269 1667 57 0 19 chr2 195772371 195772583 -57484000 + AluY SINE Alu 89 296 -15 1974 128 27 66 chr2 195772658 195772727 -57483856 - THE1B LTR MaLR 0 428 358 420 20 0 0 chr2 195772727 195772776 -57483807 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 1974 128 27 66 chr2 195772776 195773136 -57483447 - THE1B LTR MaLR -70 358 1 259 190 0 0 chr2 195773532 195773590 -57482993 + Tigger3(Golem) DNA MER2_type 2760 2817 -212 254 306 52 52 chr2 195774295 195774429 -57482154 + MER5A DNA MER1_type 56 189 0 213 159 23 0 chr2 195774576 195774620 -57481963 + (TA)n Simple_repeat Simple_repeat 2 46 0 861 225 44 22 chr2 195775263 195775490 -57481093 - MER46A DNA MER2_type -3 233 2 6376 150 47 29 chr2 195775608 195776490 -57480093 + Tigger3b DNA MER2_type 4 915 -2113 1764 154 128 13 chr2 195776490 195776873 -57479710 + MSTA LTR MaLR 2 428 0 6376 150 47 29 chr2 195776873 195777196 -57479387 + Tigger3b DNA MER2_type 915 1231 0 294 132 0 0 chr2 195777246 195777299 -57479284 + (TC)n Simple_repeat Simple_repeat 1 53 0 288 0 0 0 chr2 195778742 195778774 -57477809 + (TTCC)n Simple_repeat Simple_repeat 1 32 0 1246 67 11 6 chr2 195778774 195778952 -57477631 + (TTTC)n Simple_repeat Simple_repeat 1 179 0 272 100 0 20 chr2 195779237 195779287 -57477296 + (TTCA)n Simple_repeat Simple_repeat 4 52 0 332 153 18 27 chr2 195779298 195779409 -57477174 + CT-rich Low_complexity Low_complexity 2 111 0 198 0 0 0 chr2 195781064 195781086 -57475497 + (TA)n Simple_repeat Simple_repeat 1 22 0 211 347 14 0 chr2 195782267 195782339 -57474244 - L2 LINE L2 0 3272 3200 422 202 71 34 chr2 195782533 195782694 -57473889 - L1ME2 LINE L1 -9 6155 6049 216 214 0 0 chr2 195782934 195782976 -57473607 + (TAA)n Simple_repeat Simple_repeat 3 44 0 214 367 113 45 chr2 195783200 195784188 -57472395 - L2 LINE L2 -716 2598 1543 3624 173 50 12 chr2 195785524 195786252 -57470331 + L1MB3 LINE L1 5325 6079 -104 2365 154 3 0 chr2 195786368 195786758 -57469825 - L1MB2 LINE L1 -305 5866 5476 1660 191 17 11 chr2 195786765 195787120 -57469463 - L1PB4 LINE L1 -6 6853 6497 276 77 0 0 chr2 195787124 195787163 -57469420 + (TG)n Simple_repeat Simple_repeat 2 40 0 200 143 29 0 chr2 195787175 195787210 -57469373 + (TA)n Simple_repeat Simple_repeat 2 37 0 4274 185 20 17 chr2 195787279 195788705 -57467878 - L1PB4 LINE L1 -377 6482 5055 621 198 0 0 chr2 195788705 195788811 -57467772 - U6 snRNA snRNA -1 106 1 4274 185 20 17 chr2 195788811 195788865 -57467718 - L1PB4 LINE L1 -1804 5055 5003 1603 260 24 14 chr2 195788861 195789691 -57466892 - L1PB4 LINE L1 -3503 3346 2505 * 321 284 23 0 chr2 195789692 195789780 -57466803 - L1MC4 LINE L1 -1339 6703 6614 879 263 47 5 chr2 195789782 195790167 -57466416 - L1PB4 LINE L1 -5276 1574 1203 928 210 6 6 chr2 195790176 195790357 -57466226 - L1PB4 LINE L1 -6668 181 1 4549 211 59 3 chr2 195790384 195791631 -57464952 - L1M3 LINE L1 -743 6105 4903 4182 153 42 30 chr2 195791632 195792434 -57464149 - L1PA15 LINE L1 -23 6142 5331 3042 229 47 14 chr2 195792597 195793506 -57463077 - L1M3 LINE L1 -2116 4732 3794 1215 196 4 4 chr2 195793530 195793760 -57462823 - AluJo SINE Alu 0 312 83 459 152 22 228 chr2 195793760 195794036 -57462547 - L1M3 LINE L1 -3112 3736 3518 8102 180 27 41 chr2 195794038 195795679 -57460904 - L1MA4 LINE L1 -298 7421 5822 198 0 0 0 chr2 195795679 195795701 -57460882 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 8102 180 27 41 chr2 195795701 195796480 -57460103 - L1MA4 LINE L1 -1897 5822 5033 862 231 57 60 chr2 195796474 195796755 -57459828 - L1MA4 LINE L1 -7274 291 12 * 406 234 24 40 chr2 195796754 195796878 -57459705 - L1M3 LINE L1 -4325 2524 2403 * 9804 80 25 0 chr2 195796878 195798192 -57458391 - HERVL-A2 LTR ERVL -4307 1347 1 3141 88 13 43 chr2 195798192 195798261 -57458322 - MLT2A2 LTR ERVL 0 453 383 2251 108 0 7 chr2 195798261 195798567 -57458016 + AluSx SINE Alu 1 304 -8 3141 88 13 43 chr2 195798567 195798964 -57457619 - MLT2A2 LTR ERVL -70 383 1 210 150 75 0 chr2 195798971 195799011 -57457572 + MIR SINE MIR 124 166 -96 22 0 0 0 chr2 195799522 195799544 -57457039 + AT_rich Low_complexity Low_complexity 1 22 0 5952 31 7 0 chr2 195800777 195801509 -57455074 - L1PA3 LINE L1 0 6155 5419 231 299 30 0 chr2 195802653 195802720 -57453863 + LTR33 LTR ERVL 109 177 -344 306 259 36 45 chr2 195803945 195804057 -57452526 + ERVL LTR ERVL 1272 1382 -4382 1763 326 75 30 chr2 195804137 195805167 -57451416 + ERVL LTR ERVL 1492 2567 -3197 27 29 0 0 chr2 195805884 195805918 -57450665 + AT_rich Low_complexity Low_complexity 1 34 0 211 317 207 0 chr2 195806359 195806441 -57450142 + MIR SINE MIR 20 118 -144 3565 152 64 35 chr2 195806447 195807136 -57449447 - L1PA16 LINE L1 0 6166 5458 1345 141 5 12 chr2 195807136 195807461 -57449122 + L1P4 LINE L1 5178 5492 -659 440 344 62 12 chr2 195807628 195807884 -57448699 + L1MEc LINE L1 37 305 -6091 254 73 24 0 chr2 195808531 195808572 -57448011 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 450 254 52 15 chr2 195808581 195808715 -57447868 + MIR SINE MIR 3 141 -121 2042 51 0 4 chr2 195808906 195809162 -57447421 - AluY SINE Alu -10 301 47 22 88 0 0 chr2 195809196 195809253 -57447330 + AT_rich Low_complexity Low_complexity 1 57 0 2046 140 42 22 chr2 195809312 195809669 -57446914 - THE1B LTR MaLR 0 364 1 192 393 211 27 chr2 195811678 195811976 -57444607 + L2 LINE L2 2920 3272 0 27 29 0 0 chr2 195812600 195812634 -57443949 + AT_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr2 195814014 195814036 -57442547 + AT_rich Low_complexity Low_complexity 1 22 0 2381 55 3 3 chr2 195814275 195814586 -57441997 + L1PA5 LINE L1 5843 6153 -1 216 0 0 0 chr2 195815867 195815891 -57440692 + (CA)n Simple_repeat Simple_repeat 1 24 0 387 41 0 0 chr2 195816057 195816106 -57440477 + (TG)n Simple_repeat Simple_repeat 2 50 0 29 0 0 0 chr2 195816947 195816976 -57439607 + AT_rich Low_complexity Low_complexity 1 29 0 362 234 24 127 chr2 195818913 195819118 -57437465 + L2 LINE L2 3130 3313 0 291 335 61 35 chr2 195819395 195819526 -57437057 - L2 LINE L2 -56 3257 3116 2319 131 77 17 chr2 195819526 195819930 -57436653 - MSTA LTR MaLR 0 428 1 291 335 61 35 chr2 195819930 195820028 -57436555 - L2 LINE L2 -197 3116 3022 2840 86 0 0 chr2 195820187 195820549 -57436034 + THE1B LTR MaLR 3 364 0 222 259 0 0 chr2 195820715 195820769 -57435814 + GA-rich Low_complexity Low_complexity 1 54 0 665 327 18 14 chr2 195821896 195822119 -57434464 + MIR SINE MIR 39 262 0 455 318 62 19 chr2 195822496 195822707 -57433876 + MIR SINE MIR 31 250 -12 25 51 0 0 chr2 195823437 195823476 -57433107 + AT_rich Low_complexity Low_complexity 1 39 0 185 0 40 0 chr2 195824377 195824402 -57432181 + (TA)n Simple_repeat Simple_repeat 2 27 0 31 58 0 0 chr2 195824667 195824719 -57431864 + AT_rich Low_complexity Low_complexity 1 52 0 1891 129 0 0 chr2 195824894 195825166 -57431417 + AluJb SINE Alu 26 297 -15 1205 107 0 74 chr2 195825770 195825985 -57430598 + AluSq SINE Alu 4 202 -111 25 75 0 0 chr2 195826173 195826226 -57430357 + AT_rich Low_complexity Low_complexity 1 53 0 1891 129 0 0 chr2 195826401 195826673 -57429910 + AluJb SINE Alu 26 297 -15 1409 106 0 68 chr2 195827280 195827515 -57429068 + AluSq SINE Alu 4 222 -91 536 204 8 23 chr2 195827628 195827760 -57428823 + AluSg/x SINE Alu 170 299 -11 383 82 0 16 chr2 195827770 195827831 -57428752 + (GGGGA)n Simple_repeat Simple_repeat 1 60 0 22 0 0 0 chr2 195828229 195828251 -57428332 + AT_rich Low_complexity Low_complexity 1 22 0 45 45 0 0 chr2 195828394 195828460 -57428123 + AT_rich Low_complexity Low_complexity 1 66 0 435 381 80 21 chr2 195828746 195829761 -57426822 - L2 LINE L2 -181 3091 1992 183 80 0 0 chr2 195829851 195829876 -57426707 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 540 98 68 0 chr2 195830114 195830247 -57426336 + (TA)n Simple_repeat Simple_repeat 2 143 0 358 285 70 69 chr2 195830572 195830782 -57425801 + MIR SINE MIR 54 260 -2 257 404 61 5 chr2 195830886 195831084 -57425499 - MIR SINE MIR -48 214 6 1324 180 37 63 chr2 195831351 195831651 -57424932 + AluJo SINE Alu 1 292 -20 784 163 24 120 chr2 195833499 195833708 -57422875 + MER5A DNA MER1_type 1 189 0 1676 246 24 12 chr2 195833720 195834219 -57422364 - Charlie4a DNA MER1_type -3 505 1 246 221 78 13 chr2 195835304 195835381 -57421202 - L2 LINE L2 -12 3301 3220 2182 97 3 13 chr2 195836411 195836756 -57419827 - AluSc SINE Alu 0 342 1 1266 370 38 27 chr2 195836789 195837449 -57419134 - MER115 DNA AcHobo 0 693 27 1026 171 24 49 chr2 195837720 195837922 -57418661 - L1 LINE L1 -1457 4689 4493 2279 69 7 3 chr2 195837922 195838226 -57418357 - AluY SINE Alu -6 305 1 1026 171 24 49 chr2 195838226 195838269 -57418314 - L1 LINE L1 -1653 4493 4450 1071 206 14 65 chr2 195838521 195838797 -57417786 - MLT1A1 LTR MaLR 0 365 104 717 231 26 0 chr2 195838799 195838955 -57417628 - AluJb SINE Alu -10 302 143 643 112 0 31 chr2 195838959 195839057 -57417526 - MSTC LTR MaLR -333 95 1 4254 226 40 10 chr2 195839129 195840027 -57416556 - ERVL-B1 LTR ERVL -4839 925 1 292 133 0 67 chr2 195840028 195840072 -57416511 - MLT2B1 LTR ERVL -1 514 473 240 35 0 0 chr2 195840072 195840101 -57416482 + (TG)n Simple_repeat Simple_repeat 2 30 0 292 133 0 67 chr2 195840101 195840116 -57416467 - MLT2B1 LTR ERVL -42 473 459 2620 208 0 20 chr2 195840132 195840571 -57416012 - MLT2B1 LTR ERVL -40 480 50 1306 221 141 3 chr2 195840571 195840919 -57415664 + MSTD LTR MaLR 1 396 0 2620 208 0 20 chr2 195840919 195840969 -57415614 - MLT2B1 LTR ERVL -470 50 1 891 249 19 53 chr2 195840980 195841245 -57415338 + MLT1A2 LTR MaLR 119 374 0 4852 131 13 32 chr2 195841809 195842266 -57414317 + L1PA16 LINE L1 5353 5817 -349 1861 146 126 28 chr2 195842266 195842656 -57413927 + MSTA LTR MaLR 1 428 0 8496 166 17 39 chr2 195842658 195844272 -57412311 + MSTA-int LTR MaLR 3 1580 0 1770 152 124 38 chr2 195844272 195844666 -57411917 + MSTA LTR MaLR 1 428 0 4852 131 13 32 chr2 195844666 195845034 -57411549 + L1PA16 LINE L1 5816 6166 0 180 343 82 0 chr2 195845151 195845224 -57411359 + L2 LINE L2 1720 1798 -1516 418 300 103 38 chr2 195845227 195846294 -57410289 - L1M4 LINE L1 -1334 4812 3662 185 94 31 0 chr2 195846440 195846472 -57410111 + A-rich Low_complexity Low_complexity 3 35 0 21 0 0 0 chr2 195847835 195847856 -57408727 + AT_rich Low_complexity Low_complexity 1 21 0 915 243 110 3 chr2 195848552 195848889 -57407694 + LTR37A LTR ERV1 36 408 -18 4917 146 31 41 chr2 195848889 195850059 -57406524 + L1PB4 LINE L1 4990 6153 -3 558 228 21 42 chr2 195851831 195852020 -57404563 - Charlie1 DNA MER1_type -17 2744 2560 252 251 25 152 chr2 195852484 195852727 -57403856 + MER31-int LTR ERV1 2671 2882 -2054 1922 98 4 0 chr2 195852736 195852992 -57403591 + AluSx SINE Alu 1 257 -55 265 98 20 20 chr2 195853156 195853207 -57403376 + MER31-int LTR ERV1 3078 3128 -1808 1007 154 20 62 chr2 195853244 195853439 -57403144 - MER1B DNA MER1_type 0 339 153 * 1105 181 230 5 chr2 195853436 195853883 -57402700 - MER52A LTR ERV1 -1153 602 1 1482 260 32 72 chr2 195854509 195855279 -57401304 + MER31-int LTR ERV1 3388 4027 -909 990 236 61 14 chr2 195855301 195855597 -57400986 + L1MD3 LINE L1 3360 3669 -2477 654 165 0 0 chr2 195855601 195855704 -57400879 + AluSq/x SINE Alu 27 129 -184 191 57 19 57 chr2 195855706 195855759 -57400824 + (TA)n Simple_repeat Simple_repeat 1 51 0 2204 226 145 11 chr2 195855770 195855898 -57400685 + L1MD3 LINE L1 4660 4770 -1376 270 0 0 0 chr2 195855898 195855928 -57400655 + (TA)n Simple_repeat Simple_repeat 2 31 0 2204 226 145 11 chr2 195855928 195856384 -57400199 + L1MD3 LINE L1 4770 4884 -1262 210 91 0 0 chr2 195856384 195856417 -57400166 + (TA)n Simple_repeat Simple_repeat 2 34 0 2204 226 145 11 chr2 195856417 195857016 -57399567 + L1MD3 LINE L1 4884 5402 -744 1575 229 60 46 chr2 195856687 195857206 -57399377 + L1MB8 LINE L1 5652 6177 -1 * 869 182 25 10 chr2 195857509 195857707 -57398876 + LTR37A LTR ERV1 224 424 -2 808 233 88 5 chr2 195860626 195860819 -57395764 - MER63A DNA MER1_type 0 210 2 197 65 32 0 chr2 195861611 195861642 -57394941 + (CAG)n Simple_repeat Simple_repeat 1 32 0 244 361 151 8 chr2 195861649 195861768 -57394815 - L2 LINE L2 -21 3251 3116 258 32 0 0 chr2 195862396 195862427 -57394156 + (CA)n Simple_repeat Simple_repeat 2 32 0 180 24 48 71 chr2 195865326 195865368 -57391215 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 2528 43 0 0 chr2 195865773 195866074 -57390509 + AluY SINE Alu 1 301 -10 22 35 0 0 chr2 195867175 195867204 -57389379 + AT_rich Low_complexity Low_complexity 1 29 0 1269 224 134 9 chr2 195869045 195869389 -57387194 - MER69 DNA AcHobo -809 417 31 542 206 42 112 chr2 195869846 195870074 -57386509 - MIR SINE MIR -29 233 10 8472 78 4 3 chr2 195870441 195872347 -57384236 + L1PA8 LINE L1 4160 6067 -105 592 0 0 0 chr2 195872343 195872411 -57384172 - L1PA3 LINE L1 -166 5989 5922 * 1459 12 0 0 chr2 195872411 195872576 -57384007 + L1PA3 LINE L1 5987 6153 -2 800 85 0 0 chr2 195872608 195872714 -57383869 + L1PA7 LINE L1 6041 6146 -8 1435 210 0 25 chr2 195872856 195873142 -57383441 + AluJo SINE Alu 19 297 -15 903 305 99 30 chr2 195873295 195873761 -57382822 + LTR33 LTR ERVL 23 520 -1 243 58 58 29 chr2 195874671 195874740 -57381843 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 208 357 0 24 chr2 195874973 195875057 -57381526 - MIR3 SINE MIR -28 180 99 369 276 24 39 chr2 195876425 195876552 -57380031 - MIR SINE MIR -56 206 82 25 0 0 0 chr2 195877672 195877697 -57378886 + AT_rich Low_complexity Low_complexity 1 25 0 2396 117 25 115 chr2 195880471 195880731 -57375852 + L1MA5A LINE L1 5793 5980 -317 2826 3 0 0 chr2 195880731 195881039 -57375544 + AluYb8 SINE Alu 1 308 -10 2396 117 25 115 chr2 195881039 195881327 -57375256 + L1MA5A LINE L1 5980 6292 -5 23 68 0 0 chr2 195881380 195881424 -57375159 + AT_rich Low_complexity Low_complexity 1 44 0 387 0 0 0 chr2 195881690 195881733 -57374850 + (CA)n Simple_repeat Simple_repeat 1 43 0 22 35 0 0 chr2 195882592 195882621 -57373962 + AT_rich Low_complexity Low_complexity 1 29 0 544 350 30 10 chr2 195882808 195883011 -57373572 + MIR SINE MIR 56 262 0 412 286 60 22 chr2 195884389 195884574 -57372009 - L2 LINE L2 -47 3266 3075 2159 72 7 7 chr2 195885745 195886024 -57370559 + AluY SINE Alu 16 294 -17 861 66 0 0 chr2 195886398 195886504 -57370079 + AluSg/x SINE Alu 176 281 -31 200 278 0 19 chr2 195887186 195887240 -57369343 + CT-rich Low_complexity Low_complexity 2 54 0 200 287 58 23 chr2 195887753 195887840 -57368743 - MIR3 SINE MIR -34 174 85 400 318 9 0 chr2 195887894 195888001 -57368582 - L2 LINE L2 -5 3308 3201 440 313 44 26 chr2 195888412 195888639 -57367944 - MIR SINE MIR 0 262 32 1706 163 0 24 chr2 195888648 195888964 -57367619 + AluJo SINE Alu 1 309 0 2826 3 0 0 chr2 195889760 195890068 -57366515 + AluYb8 SINE Alu 1 308 -10 27 29 0 0 chr2 195890377 195890411 -57366172 + AT_rich Low_complexity Low_complexity 1 34 0 210 359 0 33 chr2 195890867 195890959 -57365624 - L3 LINE CR1 -7 1570 1482 21 0 0 0 chr2 195891010 195891031 -57365552 + AT_rich Low_complexity Low_complexity 1 21 0 223 250 44 0 chr2 195891417 195891485 -57365098 - L3 LINE CR1 -715 862 792 291 351 115 55 chr2 195891866 195892319 -57364264 - L2 LINE L2 -516 2798 2319 536 296 50 12 chr2 195892321 195892642 -57363941 + L1ME4a LINE L1 5583 5915 -206 646 174 6 23 chr2 195892761 195892933 -57363650 + GA-rich Low_complexity Low_complexity 1 169 0 33 0 0 0 chr2 195894024 195894057 -57362526 + AT_rich Low_complexity Low_complexity 1 33 0 631 330 96 4 chr2 195894441 195894680 -57361903 - MIR SINE MIR 0 262 2 41 72 0 0 chr2 195895721 195895804 -57360779 + AT_rich Low_complexity Low_complexity 1 83 0 2242 88 3 0 chr2 195896229 195896523 -57360060 - AluSc SINE Alu -14 295 1 355 283 72 7 chr2 195896983 195897135 -57359448 + MER103 DNA DNA 3 164 -2 263 317 49 0 chr2 195897367 195897449 -57359134 + L2 LINE L2 3171 3256 -16 701 250 109 0 chr2 195898171 195898355 -57358228 + MER63A DNA MER1_type 1 204 -6 1268 145 10 0 chr2 195900531 195900731 -57355852 - AluJb SINE Alu -22 290 89 23 33 0 0 chr2 195900846 195900876 -57355707 + AT_rich Low_complexity Low_complexity 1 30 0 2147 129 39 20 chr2 195901478 195901835 -57354748 + THE1B LTR MaLR 1 364 0 25 51 0 0 chr2 195902365 195902404 -57354179 + AT_rich Low_complexity Low_complexity 1 39 0 25 65 0 0 chr2 195903476 195903522 -57353061 + AT_rich Low_complexity Low_complexity 1 46 0 223 366 56 0 chr2 195903644 195903715 -57352868 + L2 LINE L2 3196 3270 -2 2035 131 0 19 chr2 195903830 195904142 -57352441 - AluSx SINE Alu -6 306 1 21 0 0 0 chr2 195904376 195904397 -57352186 + AT_rich Low_complexity Low_complexity 1 21 0 715 255 19 0 chr2 195907476 195907637 -57348946 - FRAM SINE Alu -2 164 1 354 339 11 32 chr2 195907899 195908085 -57348498 + MER5A DNA MER1_type 6 187 -2 218 301 14 14 chr2 195908278 195908351 -57348232 + L2 LINE L2 3146 3218 -95 448 364 11 6 chr2 195908483 195908659 -57347924 - MER5B DNA MER1_type -1 177 1 1591 230 127 42 chr2 195908677 195909252 -57347331 + MLT1E2 LTR MaLR 1 624 -2 227 282 39 39 chr2 195909401 195909479 -57347104 + MIR SINE MIR 68 145 -63 238 302 31 10 chr2 195909583 195909679 -57346904 + MIR SINE MIR 102 199 -63 230 350 30 10 chr2 195909903 195910003 -57346580 - MIR SINE MIR -104 104 2 288 0 0 0 chr2 195910791 195910823 -57345760 + (TTG)n Simple_repeat Simple_repeat 2 33 0 22 35 0 0 chr2 195910947 195910976 -57345607 + AT_rich Low_complexity Low_complexity 1 29 0 193 331 223 0 chr2 195911734 195911882 -57344701 + MIR SINE MIR 36 216 -46 1570 158 22 4 chr2 195912313 195912591 -57343992 - L1PB4 LINE L1 -1 6155 5873 365 355 81 37 chr2 195913343 195913751 -57342832 + MLT1K LTR MaLR 108 533 -55 229 232 89 0 chr2 195913847 195913903 -57342680 + MIR SINE MIR 91 151 -57 3703 204 31 26 chr2 195914162 195914454 -57342129 + L1MB7 LINE L1 5033 5322 -862 2923 142 50 2 chr2 195914454 195914991 -57341592 + L1MA5 LINE L1 5725 6287 -13 3703 204 31 26 chr2 195914991 195915768 -57340815 + L1MB7 LINE L1 5322 6114 -70 571 193 17 8 chr2 195915768 195915887 -57340696 - L1PA16 LINE L1 -3 6163 6044 3703 204 31 26 chr2 195915887 195915959 -57340624 + L1MB7 LINE L1 6114 6184 0 21 36 0 0 chr2 195916298 195916326 -57340257 + AT_rich Low_complexity Low_complexity 1 28 0 567 122 0 0 chr2 195916706 195916796 -57339787 + (GGAA)n Simple_repeat Simple_repeat 3 92 0 23 54 0 0 chr2 195916827 195916864 -57339719 + AT_rich Low_complexity Low_complexity 1 37 0 258 314 105 20 chr2 195916957 195917110 -57339473 - L2 LINE L2 0 3313 3148 189 121 0 0 chr2 195917178 195917211 -57339372 + (TG)n Simple_repeat Simple_repeat 1 33 0 417 283 46 40 chr2 195917397 195917570 -57339013 + MER117 DNA MER1_type 18 191 -6 804 242 112 29 chr2 195917653 195917930 -57338653 + MLT1A2 LTR MaLR 59 358 -16 21 0 0 0 chr2 195919265 195919286 -57337297 + AT_rich Low_complexity Low_complexity 1 21 0 315 335 80 36 chr2 195919725 195919949 -57336634 + MIR SINE MIR 22 255 -7 326 134 15 0 chr2 195920696 195920763 -57335820 + (TG)n Simple_repeat Simple_repeat 1 68 0 252 145 65 0 chr2 195920898 195920960 -57335623 + (CAAAC)n Simple_repeat Simple_repeat 4 69 0 182 103 0 26 chr2 195921494 195921533 -57335050 + (CAGAGA)n Simple_repeat Simple_repeat 3 40 0 206 259 141 22 chr2 195921869 195922004 -57334579 + L2 LINE L2 3163 3313 0 263 241 35 103 chr2 195922726 195922871 -57333712 + MIR3 SINE MIR 67 201 -7 21 57 0 0 chr2 195923494 195923529 -57333054 + AT_rich Low_complexity Low_complexity 1 35 0 609 338 68 62 chr2 195924317 195924657 -57331926 - L2 LINE L2 0 3272 2931 275 345 90 45 chr2 195924855 195925409 -57331174 - L2 LINE L2 -1481 1833 1255 2135 52 63 0 chr2 195926504 195926774 -57329809 + AluY SINE Alu 21 307 -4 332 314 52 29 chr2 195927133 195927305 -57329278 + MIR3 SINE MIR 24 199 -9 427 278 44 33 chr2 195928684 195928864 -57327719 + MIR SINE MIR 81 262 0 21 57 0 0 chr2 195928948 195928983 -57327600 + AT_rich Low_complexity Low_complexity 1 35 0 25 51 0 0 chr2 195929131 195929170 -57327413 + AT_rich Low_complexity Low_complexity 1 39 0 31 0 0 0 chr2 195929639 195929670 -57326913 + AT_rich Low_complexity Low_complexity 1 31 0 647 199 46 31 chr2 195930819 195931015 -57325568 + L1MA8 LINE L1 6092 6290 -1 226 50 50 0 chr2 195932025 195932065 -57324518 + (CAAA)n Simple_repeat Simple_repeat 4 45 0 23 54 0 0 chr2 195932529 195932566 -57324017 + AT_rich Low_complexity Low_complexity 1 37 0 2091 88 6 64 chr2 195933614 195933942 -57322641 - AluSc SINE Alu 0 309 1 1325 209 79 27 chr2 195933947 195934315 -57322268 + MLT1B LTR MaLR 4 390 0 23 68 0 0 chr2 195935222 195935266 -57321317 + AT_rich Low_complexity Low_complexity 1 44 0 22 35 0 0 chr2 195939722 195939751 -57316832 + AT_rich Low_complexity Low_complexity 1 29 0 873 209 46 39 chr2 195940578 195940861 -57315722 - Charlie2 DNA MER1_type -114 2748 2464 235 237 34 59 chr2 195941100 195941218 -57315365 - Charlie2 DNA MER1_type -409 2453 2339 401 335 59 0 chr2 195941460 195941612 -57314971 - MIR SINE MIR -80 182 22 679 238 3 121 chr2 195941743 195942058 -57314525 - Charlie2 DNA MER1_type -2444 338 61 2415 70 0 0 chr2 195943381 195943679 -57312904 + AluY SINE Alu 1 298 -13 30 45 0 0 chr2 195943712 195943756 -57312827 + AT_rich Low_complexity Low_complexity 1 44 0 343 352 40 28 chr2 195944151 195944327 -57312256 - MIR3 SINE MIR -15 193 16 997 296 78 27 chr2 195946455 195946905 -57309678 - L2 LINE L2 -35 3278 2806 1789 185 26 3 chr2 195947513 195947853 -57308730 + MER7A DNA MER2_type 1 346 0 1469 254 93 16 chr2 195949155 195949672 -57306911 + L1ME3A LINE L1 5391 5947 -223 2285 132 39 68 chr2 195949863 195950302 -57306281 - MSTB LTR MaLR 0 426 1 339 65 0 0 chr2 195950619 195950665 -57305918 + (TG)n Simple_repeat Simple_repeat 2 47 0 213 256 13 13 chr2 195951587 195951665 -57304918 + T-rich Low_complexity Low_complexity 2 79 0 1197 86 0 0 chr2 195952030 195952182 -57304401 + AluY SINE Alu 1 152 -159 377 259 34 169 chr2 195953814 195953970 -57302613 - L2 LINE L2 0 3313 3137 1576 137 117 4 chr2 195953970 195954226 -57302357 + AluSx SINE Alu 1 285 -27 377 259 34 169 chr2 195954226 195954256 -57302327 - L2 LINE L2 -176 3137 3105 218 56 28 0 chr2 195954256 195954292 -57302291 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 377 259 34 169 chr2 195954292 195954517 -57302066 - L2 LINE L2 -208 3105 2957 23 68 0 0 chr2 195954814 195954858 -57301725 + AT_rich Low_complexity Low_complexity 1 44 0 21 36 0 0 chr2 195955528 195955556 -57301027 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 195955652 195955680 -57300903 + AT_rich Low_complexity Low_complexity 1 28 0 22 80 0 0 chr2 195956029 195956079 -57300504 + AT_rich Low_complexity Low_complexity 1 50 0 363 96 0 0 chr2 195956840 195956892 -57299691 + (TA)n Simple_repeat Simple_repeat 1 52 0 283 303 0 0 chr2 195956893 195956992 -57299591 + L1MC4 LINE L1 6614 6712 -1330 350 306 58 0 chr2 195958093 195958214 -57298369 - MIR SINE MIR -10 252 125 22 35 0 0 chr2 195959552 195959581 -57297002 + AT_rich Low_complexity Low_complexity 1 29 0 22 56 0 0 chr2 195960467 195960503 -57296080 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr2 195960642 195960665 -57295918 + AT_rich Low_complexity Low_complexity 1 23 0 360 0 0 0 chr2 195963366 195963406 -57293177 + (TG)n Simple_repeat Simple_repeat 2 41 0 217 177 42 52 chr2 195963823 195963919 -57292664 + (TATAA)n Simple_repeat Simple_repeat 1 95 0 248 296 42 0 chr2 195964108 195964179 -57292404 + MIR3 SINE MIR 98 171 -37 210 71 0 0 chr2 195964807 195964835 -57291748 + (TTCC)n Simple_repeat Simple_repeat 1 28 0 2040 112 7 10 chr2 195964835 195965130 -57291453 - AluSq SINE Alu -17 296 3 243 217 22 0 chr2 195967279 195967325 -57289258 - MER94 DNA DNA 0 134 88 2654 267 17 2 chr2 195968605 195969186 -57287397 + L1M2 LINE L1 1022 1611 -5238 * 5535 171 65 6 chr2 195969183 195970584 -57285999 + L1MA4A LINE L1 4801 6292 -11 195 250 29 15 chr2 195970728 195970796 -57285787 - L2 LINE L2 -492 2822 2754 3870 121 157 78 chr2 195971095 195971962 -57284621 - Tigger3b DNA MER2_type 0 1231 297 1276 184 77 19 chr2 195971972 195972233 -57284350 + AluJo SINE Alu 12 287 -25 1633 174 64 0 chr2 195972242 195972553 -57284030 - Tigger3b DNA MER2_type -898 333 3 23 0 0 0 chr2 195973347 195973370 -57283213 + AT_rich Low_complexity Low_complexity 1 23 0 220 256 64 13 chr2 195973614 195973692 -57282891 - MIR SINE MIR -14 248 167 366 23 0 0 chr2 195973923 195973966 -57282617 + (TG)n Simple_repeat Simple_repeat 2 44 0 225 344 80 33 chr2 195975228 195975379 -57281204 - MIR3 SINE MIR -49 159 2 597 278 122 70 chr2 195975399 195975938 -57280645 - HAL1 LINE L1 -888 1619 1053 3479 130 50 86 chr2 195976224 195977038 -57279545 + LTR1 LTR ERV1 1 785 0 495 317 141 30 chr2 195977039 195977478 -57279105 - L1M4 LINE L1 -1827 4319 3832 1193 155 52 13 chr2 195977496 195977728 -57278855 + MER96B DNA MER1_type? 177 417 0 448 350 66 33 chr2 195977776 195978170 -57278413 + MLT1K LTR MaLR 142 548 -40 1253 167 155 0 chr2 195979996 195980254 -57276329 + AluJb SINE Alu 5 302 0 279 140 0 0 chr2 195980262 195980312 -57276271 + (A)n Simple_repeat Simple_repeat 1 50 0 237 398 0 0 chr2 195980359 195980462 -57276121 - L2 LINE L2 -800 2514 2412 314 23 0 23 chr2 195983024 195983068 -57273515 + (CA)n Simple_repeat Simple_repeat 2 44 0 200 227 0 0 chr2 195983824 195983868 -57272715 + A-rich Low_complexity Low_complexity 1 44 0 911 248 28 8 chr2 195984254 195984508 -57272075 - L1MA9 LINE L1 -38 6274 6016 236 314 0 0 chr2 195985375 195985445 -57271138 - LTR33 LTR ERVL -346 175 106 246 338 136 25 chr2 195986954 195987277 -57269306 - L1MC/D LINE L1 -1933 5875 5517 461 259 18 30 chr2 195987431 195987499 -57269084 - MER104 DNA Tc2 -1731 167 100 2136 122 0 3 chr2 195987499 195987802 -57268781 + AluSx SINE Alu 1 302 -10 461 259 18 30 chr2 195987802 195987899 -57268684 - MER104 DNA Tc2 -1798 100 4 242 297 99 0 chr2 195988208 195988309 -57268274 + L1ME4a LINE L1 5978 6088 -33 186 313 104 30 chr2 195989839 195989973 -57266610 + L2 LINE L2 3169 3312 -1 346 322 78 41 chr2 195990287 195990532 -57266051 - MIR SINE MIR -3 259 6 1598 193 14 0 chr2 195991113 195991409 -57265174 - AluJb SINE Alu -12 300 1 1914 103 96 0 chr2 195992874 195993156 -57263427 + AluSq SINE Alu 1 309 -4 396 0 0 0 chr2 195994316 195994360 -57262223 + (TA)n Simple_repeat Simple_repeat 2 45 0 596 277 62 27 chr2 195995110 195995334 -57261249 - MIR SINE MIR -25 237 6 27 62 0 0 chr2 195995823 195995871 -57260712 + AT_rich Low_complexity Low_complexity 1 48 0 273 146 0 0 chr2 195996410 195996458 -57260125 + (GGGAA)n Simple_repeat Simple_repeat 3 50 0 193 333 79 8 chr2 195997342 195997468 -57259115 - L3 LINE CR1 -50 1527 1393 187 383 55 16 chr2 195997613 195997741 -57258842 - L3 LINE CR1 -270 1307 1175 191 189 19 0 chr2 195997892 195997945 -57258638 + (TTTG)n Simple_repeat Simple_repeat 3 56 0 24 0 0 0 chr2 195998023 195998047 -57258536 + AT_rich Low_complexity Low_complexity 1 24 0 510 308 140 38 chr2 195998047 195998469 -57258114 - L3 LINE CR1 -589 988 524 22 0 0 0 chr2 195999812 195999834 -57256749 + AT_rich Low_complexity Low_complexity 1 22 0 304 21 62 0 chr2 196001223 196001271 -57255312 + L1MA3 LINE L1 6255 6305 0 24 32 0 0 chr2 196002235 196002266 -57254317 + AT_rich Low_complexity Low_complexity 1 31 0 186 43 0 0 chr2 196003022 196003045 -57253538 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 252 235 0 0 chr2 196003934 196003985 -57252598 + GA-rich Low_complexity Low_complexity 2 52 0 1045 266 70 39 chr2 196004991 196005808 -57250775 - L1MEc LINE L1 -3484 2731 1936 5297 163 20 23 chr2 196005970 196007303 -57249280 - L1PB4 LINE L1 -1 6155 4835 3352 56 0 0 chr2 196007306 196007714 -57248869 + THE1-int LTR MaLR 1139 1546 -34 7710 120 4 0 chr2 196007714 196008812 -57247771 - THE1B-int LTR MaLR -478 1102 1 1156 117 28 108 chr2 196008815 196009064 -57247519 - THE1B LTR MaLR -133 231 3 671 276 31 20 chr2 196009117 196009371 -57247212 - L1MEc LINE L1 -6092 304 48 1951 147 14 0 chr2 196009499 196009792 -57246791 - AluSx SINE Alu -15 297 1 216 159 0 45 chr2 196012244 196012288 -57244295 + (CATATA)n Simple_repeat Simple_repeat 1 42 0 253 337 123 18 chr2 196014964 196015127 -57241456 - MIR SINE MIR 0 262 83 320 361 132 9 chr2 196015658 196015877 -57240706 - L2 LINE L2 -23 3249 3004 225 0 0 0 chr2 196016247 196016272 -57240311 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 290 344 109 10 chr2 196016304 196016496 -57240087 - MIR SINE MIR -24 238 28 25 51 0 0 chr2 196016832 196016871 -57239712 + AT_rich Low_complexity Low_complexity 1 39 0 366 23 0 0 chr2 196018232 196018275 -57238308 + (CA)n Simple_repeat Simple_repeat 2 44 0 192 152 0 0 chr2 196019329 196019362 -57237221 + A-rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr2 196019814 196019837 -57236746 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 196020754 196020775 -57235808 + AT_rich Low_complexity Low_complexity 1 21 0 3103 185 25 2 chr2 196021080 196021676 -57234907 - L1MC2 LINE L1 -1 7763 6142 4692 93 28 3 chr2 196021683 196024586 -57231997 - L1PA7 LINE L1 -1 6153 3130 1314 193 131 18 chr2 196024586 196024882 -57231701 + LTR10B LTR ERV1 1 328 -177 694 307 34 6 chr2 196024972 196025259 -57231324 + LTR10A LTR ERV1 121 444 -81 1793 178 87 37 chr2 196025260 196025721 -57230862 + LTR2B LTR ERV1 7 490 0 18602 110 73 65 chr2 196025721 196030632 -57225951 + Harlequin LTR ERV1 1 5069 -1827 5129 105 3 1 chr2 196030623 196031376 -57225207 + Harlequin LTR ERV1 6135 6888 -8 * 1764 169 87 51 chr2 196031377 196031849 -57224734 + LTR2B LTR ERV1 2 490 0 367 210 25 0 chr2 196031849 196031930 -57224653 + LTR10B LTR ERV1 464 546 -1 14357 118 9 31 chr2 196031931 196035379 -57221204 - L1P3 LINE L1 -3012 3449 1 2504 188 25 33 chr2 196035378 196035983 -57220600 - L1MC3 LINE L1 -597 7188 6589 * 2320 191 86 18 chr2 196035982 196036344 -57220239 - L1MB1 LINE L1 -271 5897 5561 * 2146 116 0 0 chr2 196036344 196036636 -57219947 - AluSg SINE Alu -18 292 1 2320 191 86 18 chr2 196036636 196037109 -57219474 - L1MB1 LINE L1 -607 5561 5019 1517 162 21 77 chr2 196037110 196037371 -57219212 + L1MA10 LINE L1 5930 6204 -130 2134 87 0 34 chr2 196037371 196037710 -57218873 + AluY SINE Alu 1 311 0 1517 162 21 77 chr2 196037710 196037828 -57218755 + L1MA10 LINE L1 6204 6285 -49 305 194 15 0 chr2 196037828 196037895 -57218688 - L1MA10 LINE L1 -12 6322 6255 1517 162 21 77 chr2 196037895 196037941 -57218642 + L1MA10 LINE L1 6285 6332 -2 201 39 0 0 chr2 196037949 196037975 -57218608 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 1906 225 19 19 chr2 196038046 196038565 -57218018 - L1MC3 LINE L1 -1323 6462 5944 2269 212 14 18 chr2 196038579 196039145 -57217438 - L1MB8 LINE L1 -83 6095 5532 337 313 50 35 chr2 196039149 196039347 -57217236 + L2 LINE L2 3112 3312 -1 185 326 155 17 chr2 196039897 196040078 -57216505 - MIR SINE MIR -42 220 15 223 203 31 0 chr2 196040181 196040245 -57216338 + CT-rich Low_complexity Low_complexity 2 67 0 484 281 136 40 chr2 196040275 196040312 -57216271 + MIR SINE MIR 12 44 -218 1557 184 127 9 chr2 196040312 196040659 -57215924 + MLT1B LTR MaLR 3 390 0 484 281 136 40 chr2 196040659 196040849 -57215734 + MIR SINE MIR 44 261 -1 264 197 0 28 chr2 196041800 196041871 -57214712 + T-rich Low_complexity Low_complexity 2 70 0 35 41 0 0 chr2 196042779 196042828 -57213755 + AT_rich Low_complexity Low_complexity 1 49 0 21 57 0 0 chr2 196042861 196042896 -57213687 + AT_rich Low_complexity Low_complexity 1 35 0 22 56 0 0 chr2 196043628 196043664 -57212919 + AT_rich Low_complexity Low_complexity 1 36 0 1180 188 69 74 chr2 196044063 196044440 -57212143 - MLT1B LTR MaLR -6 384 10 22 70 0 0 chr2 196046284 196046327 -57210256 + AT_rich Low_complexity Low_complexity 1 43 0 21 71 0 0 chr2 196046561 196046603 -57209980 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr2 196046684 196046705 -57209878 + AT_rich Low_complexity Low_complexity 1 21 0 310 299 80 36 chr2 196046801 196047025 -57209558 - L1ME4a LINE L1 -16 6105 5872 29366 115 9 56 chr2 196047054 196053512 -57203071 + L1PA7 LINE L1 9 6150 -4 257 322 77 11 chr2 196053546 196053832 -57202751 - L1ME4a LINE L1 -304 5817 5513 246 62 0 0 chr2 196053855 196053887 -57202696 + (TG)n Simple_repeat Simple_repeat 2 33 0 718 171 8 16 chr2 196105976 196106105 -57150478 - Tigger1 DNA MER2_type -2290 128 1 1341 224 74 118 chr2 196106108 196106237 -57150346 - L1ME4a LINE L1 -769 5377 5244 261 0 0 0 chr2 196106237 196106266 -57150317 + (CA)n Simple_repeat Simple_repeat 2 30 0 1341 224 74 118 chr2 196106266 196106595 -57149988 - L1ME4a LINE L1 -902 5244 4902 502 118 0 0 chr2 196106595 196106671 -57149912 - MER41A LTR ERV1 -88 466 391 1341 224 74 118 chr2 196106671 196107121 -57149462 - L1ME4a LINE L1 -1244 4902 4436 842 145 21 0 chr2 196107255 196107400 -57149183 - HERVH LTR ERV1 -4426 3287 3140 * 10682 91 21 9 chr2 196107394 196108972 -57147611 - HERVH LTR ERV1 -4726 2987 1391 239 341 0 0 chr2 196108972 196109104 -57147479 + C-rich Low_complexity Low_complexity 1 132 0 446 167 0 0 chr2 196109217 196109289 -57147294 - AluS SINE Alu -233 80 9 338 64 0 0 chr2 196109289 196109336 -57147247 + MADE1 DNA Mariner 34 80 0 677 192 0 0 chr2 196109534 196109654 -57146929 + FLAM_A SINE Alu 1 120 -13 267 31 0 0 chr2 196109663 196109695 -57146888 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 231 367 0 0 chr2 196109819 196109879 -57146704 + MIR SINE MIR 28 87 -121 46 33 0 0 chr2 196110234 196110294 -57146289 + AT_rich Low_complexity Low_complexity 1 60 0 2143 124 0 7 chr2 196110399 196110706 -57145877 + AluSx SINE Alu 1 305 -7 1946 156 30 8 chr2 196111452 196111818 -57144765 + L1PA16 LINE L1 5793 6166 0 2004 131 14 0 chr2 196112775 196113072 -57143511 + AluSp SINE Alu 1 301 -12 197 360 23 0 chr2 196113092 196113178 -57143405 + L3 LINE CR1 1387 1474 -103 1812 135 14 0 chr2 196113222 196113547 -57143036 - AluSq SINE Alu 0 329 1 9298 91 14 35 chr2 196115253 196116697 -57139886 - HERVH LTR ERV1 -6298 1415 1 3258 73 2 7 chr2 196116699 196117149 -57139434 - LTR7 LTR ERV1 -2 448 1 1178 235 72 44 chr2 196117699 196118158 -57138425 + L1 LINE L1 2551 3022 -3124 35 41 0 0 chr2 196119480 196119529 -57137054 + AT_rich Low_complexity Low_complexity 1 49 0 23 33 0 0 chr2 196119666 196119696 -57136887 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 196120125 196120146 -57136437 + AT_rich Low_complexity Low_complexity 1 21 0 26 104 0 0 chr2 196120329 196120425 -57136158 + AT_rich Low_complexity Low_complexity 1 96 0 257 268 49 82 chr2 196122603 196122786 -57133797 + MIR SINE MIR 84 260 -2 219 176 78 39 chr2 196122789 196122891 -57133692 + (TATATG)n Simple_repeat Simple_repeat 2 107 0 4875 155 33 43 chr2 196123254 196124506 -57132077 - L1MA7 LINE L1 -1 6290 5054 24 32 0 0 chr2 196125473 196125504 -57131079 + AT_rich Low_complexity Low_complexity 1 31 0 22 70 0 0 chr2 196125532 196125575 -57131008 + AT_rich Low_complexity Low_complexity 1 43 0 327 113 32 16 chr2 196125801 196125863 -57130720 + LTR60 LTR ERV1 1 63 -523 931 176 59 36 chr2 196125924 196126146 -57130437 + THE1C LTR MaLR 1 227 -148 216 217 22 0 chr2 196127266 196127312 -57129271 + CT-rich Low_complexity Low_complexity 2 48 0 2090 118 7 0 chr2 196127780 196128084 -57128499 - AluSx SINE Alu -6 306 1 32 75 0 0 chr2 196128410 196128477 -57128106 + AT_rich Low_complexity Low_complexity 1 67 0 23 0 0 0 chr2 196128676 196128699 -57127884 + AT_rich Low_complexity Low_complexity 1 23 0 1996 129 3 68 chr2 196129262 196129642 -57126941 + THE1A LTR MaLR 1 355 0 11575 95 6 2 chr2 196129642 196131217 -57125366 + THE1A-int LTR MaLR 1 1580 0 379 156 100 0 chr2 196131217 196131307 -57125276 + THE1A LTR MaLR 1 99 -276 1069 152 0 91 chr2 196131411 196131641 -57124942 + THE1A LTR MaLR 147 355 0 27 29 0 0 chr2 196132615 196132649 -57123934 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr2 196133212 196133233 -57123350 + AT_rich Low_complexity Low_complexity 1 21 0 700 273 116 20 chr2 196133973 196134318 -57122265 - L1MC4 LINE L1 -287 7755 7378 940 271 45 75 chr2 196134322 196134806 -57121777 - L1M4 LINE L1 -2045 4101 3633 1623 199 13 3 chr2 196134806 196135108 -57121475 + AluJb SINE Alu 3 307 -5 940 271 45 75 chr2 196135108 196135154 -57121429 - L1M4 LINE L1 -2513 3633 3587 1847 172 0 0 chr2 196135826 196136129 -57120454 + AluSx SINE Alu 9 311 -1 364 300 23 0 chr2 196136214 196136344 -57120239 - L1M4 LINE L1 -2959 3187 3055 6196 104 45 29 chr2 196136356 196137501 -57119082 - SVA Other Other -728 1386 428 341 309 107 52 chr2 196137509 196137894 -57118689 + L1 LINE L1 525 930 -5919 7367 133 28 13 chr2 196138040 196139187 -57117396 + THE1C-int LTR MaLR 417 1580 0 1688 162 72 12 chr2 196139187 196139533 -57117050 + THE1C LTR MaLR 1 367 -8 956 260 41 53 chr2 196139630 196139734 -57116849 + LTR43 LTR ERV1 132 236 -366 2084 118 10 22 chr2 196139734 196140047 -57116536 - AluSq SINE Alu -4 309 1 956 260 41 53 chr2 196140047 196140280 -57116303 + LTR43 LTR ERV1 236 465 -137 297 247 75 21 chr2 196140520 196140613 -57115970 + MIR SINE MIR 71 168 -94 2472 127 8 3 chr2 196140662 196141024 -57115559 + THE1B LTR MaLR 1 364 0 808 298 37 4 chr2 196141198 196141440 -57115143 - MIR SINE MIR -10 252 3 2351 204 69 0 chr2 196141663 196142143 -57114440 - MER6A DNA MER2_type 0 605 93 23 0 0 0 chr2 196142240 196142263 -57114320 + AT_rich Low_complexity Low_complexity 1 23 0 9190 227 27 32 chr2 196142858 196146380 -57110203 + L1 LINE L1 2371 5731 -1117 1904 291 121 55 chr2 196146594 196147396 -57109187 - L2 LINE L2 0 3313 2565 1942 118 36 10 chr2 196147396 196147700 -57108883 + AluSx SINE Alu 1 312 0 1904 291 121 55 chr2 196147700 196148499 -57108084 - L2 LINE L2 -748 2565 1525 182 270 0 0 chr2 196148727 196148764 -57107819 - L2 LINE L2 -4 3268 3232 27 62 0 0 chr2 196149515 196149563 -57107020 + AT_rich Low_complexity Low_complexity 1 48 0 182 200 0 80 chr2 196150000 196150050 -57106533 + L2 LINE L2 3268 3313 0 357 256 32 16 chr2 196150317 196150442 -57106141 - MLT1J LTR MaLR -347 164 38 222 327 18 0 chr2 196150709 196150822 -57105761 + (CATA)n Simple_repeat Simple_repeat 3 117 0 251 269 29 67 chr2 196152317 196152421 -57104162 - MIR SINE MIR -14 248 149 61 27 0 0 chr2 196154440 196154515 -57102068 + AT_rich Low_complexity Low_complexity 1 75 0 1973 262 136 37 chr2 196155105 196156219 -57100364 - L1MC4 LINE L1 0 8042 6819 2169 141 3 34 chr2 196157941 196158323 -57098260 - L1PB1 LINE L1 0 6151 5782 190 214 14 14 chr2 196158323 196158393 -57098190 + (TA)n Simple_repeat Simple_repeat 1 70 0 1122 125 0 17 chr2 196158393 196158569 -57098014 - L1PB1 LINE L1 -360 5791 5619 345 360 130 11 chr2 196158637 196158714 -57097869 + L2 LINE L2 2766 2832 -481 2630 19 3 10 chr2 196158714 196159027 -57097556 - AluYa5 SINE Alu 0 311 1 345 360 130 11 chr2 196159027 196159328 -57097255 + L2 LINE L2 2832 3195 -118 183 290 250 0 chr2 196159473 196159573 -57097010 - L2 LINE L2 -253 3060 2936 1769 179 34 10 chr2 196159601 196160015 -57096568 + L1 LINE L1 3120 3543 -2603 630 153 24 17 chr2 196160115 196160397 -57096186 + G-rich Low_complexity Low_complexity 1 283 0 6687 185 36 13 chr2 196160570 196162053 -57094530 + L1 LINE L1 2827 4343 -1803 362 371 79 30 chr2 196162398 196162854 -57093729 - L1MEd LINE L1 -5366 753 231 408 104 0 0 chr2 196162888 196162955 -57093628 + (CA)n Simple_repeat Simple_repeat 2 68 0 24 53 0 0 chr2 196163024 196163062 -57093521 + AT_rich Low_complexity Low_complexity 1 38 0 2337 98 52 0 chr2 196163750 196164097 -57092486 + L1PA13 LINE L1 5785 6149 -14 181 219 16 16 chr2 196164435 196164499 -57092084 + (TA)n Simple_repeat Simple_repeat 2 65 0 1561 166 4 4 chr2 196164940 196165193 -57091390 - LTR31 LTR ERV1 0 619 367 2089 175 28 0 chr2 196165560 196165914 -57090669 - LTR31 LTR ERV1 -255 364 1 452 303 67 6 chr2 196166049 196166227 -57090356 + MIR SINE MIR 74 262 0 719 224 61 5 chr2 196166574 196166770 -57089813 - MER67C LTR ERV1 -2 708 502 480 311 80 5 chr2 196166769 196166981 -57089602 - MER67C LTR ERV1 -320 390 163 * 942 182 16 0 chr2 196166981 196167168 -57089415 - L1MA8 LINE L1 -1 6290 6101 437 138 46 23 chr2 196167168 196167255 -57089328 + L1 LINE L1 5185 5273 -873 2068 136 7 0 chr2 196168329 196168631 -57087952 + AluSx SINE Alu 1 304 -8 2526 170 30 9 chr2 196169489 196170174 -57086409 - L1P4 LINE L1 -687 5479 4787 2290 86 0 0 chr2 196170187 196170488 -57086095 - AluY SINE Alu -10 301 1 296 250 23 0 chr2 196170575 196170663 -57085920 - MER103 DNA DNA 0 166 77 271 323 108 15 chr2 196170826 196171021 -57085562 + MIR SINE MIR 19 231 -31 26 0 0 0 chr2 196171026 196171052 -57085531 + AT_rich Low_complexity Low_complexity 1 26 0 4804 91 8 6 chr2 196171057 196171728 -57084855 - L1PA10 LINE L1 -14 6154 5483 295 209 0 15 chr2 196171728 196171795 -57084788 + L1P3 LINE L1 554 619 -5256 183 80 0 0 chr2 196171805 196171830 -57084753 + (CACAG)n Simple_repeat Simple_repeat 1 25 0 187 260 52 52 chr2 196172274 196172351 -57084232 + L2 LINE L2 3225 3301 -12 22 35 0 0 chr2 196172555 196172584 -57083999 + AT_rich Low_complexity Low_complexity 1 29 0 261 0 0 0 chr2 196172965 196172994 -57083589 + (TA)n Simple_repeat Simple_repeat 2 30 0 225 0 0 0 chr2 196172993 196173018 -57083565 + (CA)n Simple_repeat Simple_repeat 2 26 0 * 847 163 23 0 chr2 196173018 196173234 -57083349 - L1MA9 LINE L1 -87 6225 5909 471 271 159 38 chr2 196173252 196173566 -57083017 - L1ME3A LINE L1 -11 6159 5808 22 0 0 0 chr2 196173566 196173588 -57082995 + AT_rich Low_complexity Low_complexity 1 22 0 5387 130 24 0 chr2 196173593 196173982 -57082601 + L1PA16 LINE L1 4837 5215 -951 2195 210 9 0 chr2 196173982 196174406 -57082177 - MSTA LTR MaLR 0 428 1 5387 130 24 0 chr2 196174406 196175320 -57081263 + L1PA16 LINE L1 5215 6157 -9 327 300 63 18 chr2 196175630 196175853 -57080730 - L1ME3A LINE L1 -233 5937 5705 209 119 24 0 chr2 196175967 196176009 -57080574 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 357 214 97 9 chr2 196176054 196176219 -57080364 - L1MEd LINE L1 -3710 2419 2233 707 276 73 37 chr2 196176624 196177224 -57079359 - L1MEd LINE L1 -4614 1696 1049 26 30 0 0 chr2 196177253 196177286 -57079297 + AT_rich Low_complexity Low_complexity 1 33 0 2178 131 0 0 chr2 196177948 196178253 -57078330 - AluSq SINE Alu -8 305 1 1218 140 52 101 chr2 196179224 196179510 -57077073 - AluY SINE Alu -38 273 2 463 181 78 9 chr2 196179942 196180058 -57076525 - L1MC4 LINE L1 -1466 6576 6453 31 68 0 0 chr2 196180855 196180914 -57075669 + AT_rich Low_complexity Low_complexity 1 59 0 20159 175 32 11 chr2 196181770 196185558 -57071025 + L1M1 LINE L1 1 3971 -3594 216 111 0 0 chr2 196185558 196185594 -57070989 + (CA)n Simple_repeat Simple_repeat 1 36 0 20159 175 32 11 chr2 196185594 196187993 -57068590 + L1M1 LINE L1 3971 6317 -1248 2681 88 3 0 chr2 196187993 196188347 -57068236 + THE1A LTR MaLR 1 355 0 2750 82 19 8 chr2 196188347 196188723 -57067860 + THE1A-int LTR MaLR 1 380 -1200 325 291 55 70 chr2 196188850 196189049 -57067534 + HAL1b LINE L1 3 198 -1150 843 161 0 0 chr2 196189114 196189238 -57067345 + AluJb SINE Alu 1 124 -188 363 303 33 57 chr2 196189255 196189499 -57067084 + HAL1b LINE L1 272 509 -839 3076 197 39 51 chr2 196189507 196190436 -57066147 + MER52A LTR ERV1 1 987 -768 7041 116 28 0 chr2 196190552 196191574 -57065009 + THE1A-int LTR MaLR 366 1416 -164 2365 99 3 0 chr2 196191595 196191919 -57064664 + THE1A LTR MaLR 2 326 -29 1437 204 68 35 chr2 196191919 196192539 -57064044 - MER109 Unknown Unknown -1605 827 1 2890 122 18 31 chr2 196192639 196193129 -57063454 - SVA Other Other -889 497 14 189 0 0 0 chr2 196193132 196193153 -57063430 + (GGGAGA)n Simple_repeat Simple_repeat 1 21 0 968 305 29 20 chr2 196193171 196193755 -57062828 - L1MEc LINE L1 -3106 3109 2521 552 296 104 21 chr2 196194159 196194487 -57062096 - L1MEc LINE L1 -3939 2457 2103 699 238 73 84 chr2 196196177 196196574 -57060009 + MLT1I LTR MaLR 1 545 -4 23 0 0 0 chr2 196196654 196196677 -57059906 + AT_rich Low_complexity Low_complexity 1 23 0 316 298 19 112 chr2 196196853 196197058 -57059525 + MER5A DNA MER1_type 2 187 -2 470 235 0 35 chr2 196198051 196198166 -57058417 - MIR SINE MIR -61 201 91 406 273 58 101 chr2 196198451 196198777 -57057806 - L2 LINE L2 -7 3306 2995 299 231 120 9 chr2 196198904 196199012 -57057571 + MIR SINE MIR 130 249 -13 22 0 0 0 chr2 196200852 196200874 -57055709 + AT_rich Low_complexity Low_complexity 1 22 0 1295 147 17 0 chr2 196200893 196201124 -57055459 - L1MA4 LINE L1 -6 6294 6060 279 79 0 0 chr2 196202050 196202088 -57054495 + (CA)n Simple_repeat Simple_repeat 2 39 0 232 218 0 0 chr2 196202094 196202149 -57054434 - L1MC4 LINE L1 -1339 6703 6649 1008 185 0 0 chr2 196203999 196204161 -57052422 - FRAM SINE Alu -18 158 1 476 289 90 24 chr2 196204851 196205062 -57051521 + LTR16A LTR ERVL 226 450 0 228 323 38 30 chr2 196205592 196205725 -57050858 - MER94 DNA DNA 0 134 1 34 55 0 0 chr2 196206189 196206244 -57050339 + AT_rich Low_complexity Low_complexity 1 55 0 184 300 29 14 chr2 196206353 196206423 -57050160 - MIR3 SINE MIR -5 203 133 1789 172 55 3 chr2 196206690 196207016 -57049567 + MER61A LTR ERV1 1 343 0 1950 197 48 61 chr2 196207016 196207594 -57048989 + MER61A-int LTR ERV1 1 571 -4646 * 16009 99 32 11 chr2 196207570 196211272 -57045311 + MER61A-int LTR ERV1 1396 5217 0 1949 138 72 0 chr2 196211272 196211592 -57044991 + MER61A LTR ERV1 1 343 0 7665 25 6 0 chr2 196211773 196213041 -57043542 - L1PA3 LINE L1 0 6155 4884 584 15 0 0 chr2 196213041 196213106 -57043477 + L1P LINE L1 4098 4162 -1984 262 54 0 0 chr2 196213116 196213153 -57043430 + L1P LINE L1 4126 4162 -1984 3381 39 18 2 chr2 196213163 196213608 -57042975 + L1P LINE L1 4126 4875 -1271 183 139 0 0 chr2 196213661 196213697 -57042886 + (T)n Simple_repeat Simple_repeat 1 36 0 5812 174 42 14 chr2 196213708 196214788 -57041795 - L1PA12 LINE L1 -6466 1115 6 295 274 17 40 chr2 196215094 196215269 -57041314 + (CACCC)n Simple_repeat Simple_repeat 1 171 0 22 0 0 0 chr2 196215614 196215636 -57040947 + AT_rich Low_complexity Low_complexity 1 22 0 415 231 112 41 chr2 196216813 196217108 -57039475 + L1M4 LINE L1 4085 4400 -1746 10074 142 43 19 chr2 196217643 196218110 -57038473 + Tigger1 DNA MER2_type 129 584 -1834 1583 142 135 8 chr2 196218110 196218377 -57038206 + AluSg1 SINE Alu 1 301 -8 2162 99 13 3 chr2 196218382 196218684 -57037899 + AluSq SINE Alu 1 305 -8 10074 142 43 19 chr2 196218684 196220389 -57036194 + Tigger1 DNA MER2_type 587 2417 -1 292 59 39 0 chr2 196220429 196220480 -57036103 + (TA)n Simple_repeat Simple_repeat 2 54 0 1855 137 40 0 chr2 196220481 196220759 -57035824 - AluSx SINE Alu -23 289 1 344 139 0 114 chr2 196220759 196220838 -57035745 - Tigger1 DNA MER2_type -1091 1327 1258 21 0 0 0 chr2 196220838 196220859 -57035724 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr2 196221033 196221059 -57035524 + AT_rich Low_complexity Low_complexity 1 26 0 3561 51 2 2 chr2 196221289 196221737 -57034846 - LTR7 LTR ERV1 -2 448 1 2541 70 51 3 chr2 196221737 196222111 -57034472 - HERVH LTR ERV1 0 7713 7322 1340 136 18 5 chr2 196222109 196222329 -57034254 - HERVH LTR ERV1 -1894 5819 5597 * 4244 150 3 1 chr2 196222326 196222987 -57033596 - HERVH LTR ERV1 -2564 5149 4488 1158 98 0 0 chr2 196222989 196223152 -57033431 - HERVH LTR ERV1 -3720 3993 3831 2463 167 15 49 chr2 196223420 196223904 -57032679 + L1P5 LINE L1 5008 5474 -680 1925 152 0 32 chr2 196223904 196224214 -57032369 + AluJb SINE Alu 1 300 -12 2463 167 15 49 chr2 196224214 196224454 -57032129 + L1P5 LINE L1 5474 5721 -433 256 321 73 67 chr2 196225068 196225189 -57031394 + L2 LINE L2 2088 2207 -1107 2642 136 19 5 chr2 196225189 196225609 -57030974 + MSTA LTR MaLR 1 426 -2 256 321 73 67 chr2 196225609 196225802 -57030781 + L2 LINE L2 2207 2404 -910 689 286 65 20 chr2 196225982 196226227 -57030356 + MIR SINE MIR 7 262 0 442 175 113 0 chr2 196226888 196226985 -57029598 - MER119 DNA MER1_type 0 583 476 350 243 0 27 chr2 196227024 196227098 -57029485 - MER119 DNA MER1_type -478 105 34 847 222 118 15 chr2 196227179 196227382 -57029201 + MER58A DNA MER1_type 1 224 0 23 0 0 0 chr2 196228196 196228219 -57028364 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 196228345 196228366 -57028217 + AT_rich Low_complexity Low_complexity 1 21 0 1357 173 52 68 chr2 196229870 196229991 -57026592 + AluJo SINE Alu 1 122 -190 215 31 31 0 chr2 196229991 196230023 -57026560 + (TTG)n Simple_repeat Simple_repeat 2 34 0 1357 173 52 68 chr2 196230023 196230208 -57026375 + AluJo SINE Alu 122 302 -10 183 391 46 23 chr2 196231984 196232158 -57024425 + L2 LINE L2 2915 3092 -180 417 331 0 40 chr2 196232276 196232451 -57024132 - L2 LINE L2 -4 3309 3142 1904 211 9 82 chr2 196232469 196233028 -57023555 + MLT2B1 LTR ERVL 1 518 -2 444 226 274 0 chr2 196233433 196233557 -57023026 + MER41B LTR ERV1 163 320 -315 * 702 174 121 15 chr2 196233549 196233740 -57022843 + MER66B LTR ERV1 187 486 0 297 341 16 0 chr2 196234315 196234441 -57022142 + MIR SINE MIR 91 218 -44 1374 257 55 97 chr2 196235846 196236675 -57019908 - L1MCb LINE L1 -5304 874 65 2193 117 3 0 chr2 196237175 196237482 -57019101 + AluSx SINE Alu 1 308 -4 2975 150 10 0 chr2 196237634 196238121 -57018462 - L1PA15 LINE L1 -225 7378 6887 435 83 0 0 chr2 196238121 196238181 -57018402 + (TATATG)n Simple_repeat Simple_repeat 6 65 0 12975 217 33 33 chr2 196238183 196240359 -57016224 - L1PA15 LINE L1 -1177 6407 4231 207 69 0 0 chr2 196240359 196240388 -57016195 + (TTTTA)n Simple_repeat Simple_repeat 1 29 0 2067 110 0 0 chr2 196240392 196240665 -57015918 - AluSg SINE Alu -37 273 1 12975 217 33 33 chr2 196240665 196242617 -57013966 - L1PA15 LINE L1 -3356 4228 2274 518 237 8 8 chr2 196243778 196243909 -57012674 + LTR65 LTR ERV1 10 140 -529 715 431 4 60 chr2 196243922 196244203 -57012380 - AluJo SINE Alu -9 303 39 1137 180 3 13 chr2 196244536 196244773 -57011810 + L1MA7 LINE L1 5660 5887 -271 283 336 92 39 chr2 196245710 196245939 -57010644 - MIR SINE MIR -2 260 20 201 253 20 10 chr2 196247594 196247693 -57008890 + (TATATG)n Simple_repeat Simple_repeat 4 103 0 2119 85 0 82 chr2 196248031 196248371 -57008212 + AluSx SINE Alu 1 312 0 511 326 13 36 chr2 196249067 196249291 -57007292 + L1ME3A LINE L1 105 323 -6217 621 297 137 0 chr2 196249593 196249805 -57006778 + L1ME3A LINE L1 853 1093 -5450 330 231 33 0 chr2 196249809 196249930 -57006653 + (TA)n Simple_repeat Simple_repeat 1 125 0 488 183 67 10 chr2 196249933 196250037 -57006546 + L1ME3A LINE L1 1102 1211 -5332 10913 34 5 0 chr2 196250095 196251422 -57005161 - L1PA5 LINE L1 -1020 5126 3794 7224 45 0 13 chr2 196251422 196252468 -57004115 + L1PA5 LINE L1 5117 6150 -4 1858 224 75 30 chr2 196252471 196253113 -57003470 + L1ME3A LINE L1 1226 1896 -4644 26 0 0 0 chr2 196254330 196254356 -57002227 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr2 196255363 196255384 -57001199 + AT_rich Low_complexity Low_complexity 1 21 0 1744 231 52 27 chr2 196256773 196257250 -56999333 - MLT1D LTR MaLR -1 504 16 181 293 0 0 chr2 196257674 196257715 -56998868 - L3 LINE CR1 -2 1575 1535 2075 106 32 0 chr2 196257791 196258075 -56998508 - AluSx SINE Alu -8 304 12 253 234 53 11 chr2 196258142 196258236 -56998347 + MER103 DNA DNA 68 165 -1 231 100 25 25 chr2 196258884 196258924 -56997659 + L2 LINE L2 3264 3303 -10 523 100 0 12 chr2 196259810 196259890 -56996693 - MADE1 DNA Mariner -1 79 1 625 294 52 32 chr2 196260694 196261132 -56995451 + L1ME3A LINE L1 4396 4842 -1698 526 292 99 21 chr2 196261154 196261527 -56995056 + L1ME3A LINE L1 5201 5602 -938 275 219 95 38 chr2 196261844 196261949 -56994634 + L1ME3A LINE L1 5813 5923 -633 396 267 45 34 chr2 196262024 196262200 -56994383 + L1ME3A LINE L1 6092 6269 -295 26 0 0 0 chr2 196262501 196262527 -56994056 + AT_rich Low_complexity Low_complexity 1 26 0 664 233 23 0 chr2 196262831 196262964 -56993619 + AluJo SINE Alu 1 136 -176 972 169 6 12 chr2 196263077 196263243 -56993340 - MER52A LTR ERV1 -364 1391 1227 2042 73 3 0 chr2 196264301 196264587 -56991996 + L1P LINE L1 5055 5341 -805 4812 180 28 10 chr2 196265087 196266016 -56990567 - MER52A LTR ERV1 0 1755 833 233 316 0 0 chr2 196317405 196317462 -56939121 + (CATATA)n Simple_repeat Simple_repeat 3 59 0 359 107 0 18 chr2 196318333 196318389 -56938194 + MER39 LTR ERV1 1 55 -652 1854 178 80 10 chr2 196318394 196318793 -56937790 - Tigger2 DNA MER2_type -6 2712 2286 257 167 62 0 chr2 196319459 196319507 -56937076 + L2 LINE L2 3239 3289 -24 1988 243 31 4 chr2 196320292 196320782 -56935801 + MLT1D LTR MaLR 1 503 -2 26 0 0 0 chr2 196321689 196321715 -56934868 + AT_rich Low_complexity Low_complexity 1 26 0 1648 199 3 3 chr2 196321873 196322160 -56934423 - AluJo SINE Alu -15 297 11 378 375 46 28 chr2 196322731 196323056 -56933527 + L2 LINE L2 1378 1708 -1606 290 379 37 23 chr2 196323059 196323273 -56933310 + L2 LINE L2 2693 2909 -405 186 189 0 0 chr2 196325284 196325321 -56931262 + (TTA)n Simple_repeat Simple_repeat 1 37 0 390 312 78 28 chr2 196325321 196325539 -56931044 - MLT1L LTR MaLR -74 541 313 5185 85 0 36 chr2 196325539 196326353 -56930230 + L1PA13 LINE L1 5379 6163 0 27 0 0 0 chr2 196327523 196327550 -56929033 + AT_rich Low_complexity Low_complexity 1 27 0 221 156 47 0 chr2 196327611 196327675 -56928908 + (TA)n Simple_repeat Simple_repeat 2 68 0 912 213 58 93 chr2 196327680 196327854 -56928729 - MER39 LTR ERV1 0 707 528 2377 112 0 3 chr2 196327854 196328167 -56928416 - AluSx SINE Alu 0 312 1 912 213 58 93 chr2 196328167 196328566 -56928017 - MER39 LTR ERV1 -179 528 1 606 322 42 29 chr2 196328882 196329121 -56927462 - MIR SINE MIR -10 252 11 182 361 72 0 chr2 196329858 196329941 -56926642 - MIR3 SINE MIR -1 207 119 273 351 40 20 chr2 196330082 196330233 -56926350 + MER5A DNA MER1_type 10 163 -26 * 798 236 25 0 chr2 196330103 196330264 -56926319 - MER5A DNA MER1_type -18 171 7 1758 241 45 10 chr2 196331301 196331778 -56924805 - MER110A LTR ERV1 -6 485 19 301 283 16 0 chr2 196331912 196332001 -56924582 - MERVL LTR ERVL -1224 4261 4182 687 146 79 34 chr2 196333524 196333585 -56922998 - MER63 DNA MER1_type -39 1023 966 2135 41 0 22 chr2 196333585 196333878 -56922705 + AluY SINE Alu 21 307 0 687 146 79 34 chr2 196333878 196333993 -56922590 - MER63 DNA MER1_type -96 966 838 380 230 0 0 chr2 196334024 196334098 -56922485 + MER63 DNA MER1_type 987 1060 0 347 229 157 0 chr2 196334116 196334199 -56922384 - MER63 DNA MER1_type -278 783 688 225 0 0 0 chr2 196335977 196336002 -56920581 + (TG)n Simple_repeat Simple_repeat 2 26 0 719 289 26 13 chr2 196336314 196336546 -56920037 + L1MCb LINE L1 432 666 -5241 * 1399 237 52 37 chr2 196336533 196337033 -56919550 + L1MCb LINE L1 1059 1534 -4892 471 234 36 9 chr2 196337042 196337153 -56919430 + MER21B LTR ERV1 1 114 -749 213 278 28 0 chr2 196337162 196337234 -56919349 + (TA)n Simple_repeat Simple_repeat 2 75 0 216 0 0 0 chr2 196337481 196337505 -56919078 + (A)n Simple_repeat Simple_repeat 1 24 0 21 36 0 0 chr2 196338535 196338563 -56918020 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 196338718 196338740 -56917843 + AT_rich Low_complexity Low_complexity 1 22 0 337 327 28 9 chr2 196339309 196339416 -56917167 - MER5B DNA MER1_type -10 168 60 5525 175 54 1 chr2 196339416 196340590 -56915993 - L1MC1 LINE L1 0 6333 5099 2271 103 0 0 chr2 196340743 196341044 -56915539 - AluSg SINE Alu -9 301 1 272 280 102 25 chr2 196341415 196341533 -56915050 + MIR SINE MIR 52 178 -84 186 43 0 0 chr2 196342018 196342041 -56914542 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 1720 135 4 4 chr2 196342447 196342706 -56913877 - AluSc SINE Alu -5 304 46 1010 140 104 0 chr2 196342707 196342871 -56913712 + AluSg/x SINE Alu 105 285 -27 27 0 0 0 chr2 196342887 196342914 -56913669 + AT_rich Low_complexity Low_complexity 1 27 0 605 318 52 38 chr2 196343276 196343622 -56912961 - L2 LINE L2 0 3313 2963 366 328 39 16 chr2 196344673 196344801 -56911782 - L2 LINE L2 -1 3312 3182 230 365 19 37 chr2 196344902 196345009 -56911574 - L2 LINE L2 -213 3059 2955 207 313 114 23 chr2 196345428 196345559 -56911024 - L2 LINE L2 -940 2374 2232 263 362 134 25 chr2 196345659 196345860 -56910723 - L2 LINE L2 -1668 1646 1468 2475 155 39 0 chr2 196345860 196346272 -56910311 + MSTA LTR MaLR 1 428 0 263 362 134 25 chr2 196346272 196346938 -56909645 - L2 LINE L2 -1846 1468 685 291 28 0 0 chr2 196347232 196347268 -56909315 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 2013 69 14 4 chr2 196347268 196347543 -56909040 - AluY SINE Alu -32 279 2 28 61 0 0 chr2 196347790 196347839 -56908744 + AT_rich Low_complexity Low_complexity 1 49 0 238 143 0 0 chr2 196348384 196348395 -56908188 + MER3 DNA MER1_type 37 47 -162 812 230 61 0 chr2 196348395 196348591 -56907992 - MER3 DNA MER1_type 0 209 2 477 274 27 20 chr2 196348940 196349086 -56907497 + MIR SINE MIR 116 262 0 223 347 11 21 chr2 196350175 196350270 -56906313 + MER5B DNA MER1_type 53 146 -32 262 267 11 0 chr2 196350428 196350518 -56906065 - MER20B DNA MER1_type -180 603 513 395 266 39 8 chr2 196350715 196350843 -56905740 - MIR SINE MIR 0 262 131 512 188 103 48 chr2 196351000 196351165 -56905418 - LTR48 LTR ERV1 -1 786 613 2253 114 3 0 chr2 196351522 196351830 -56904753 - AluSc SINE Alu 0 309 1 474 304 80 31 chr2 196352505 196352791 -56903792 + ERVL LTR ERVL 818 1117 -4647 298 246 0 0 chr2 196352914 196352975 -56903608 + MER8 DNA MER2_type 179 239 0 1345 195 82 19 chr2 196352980 196353505 -56903078 + LTR48 LTR ERV1 49 542 0 288 243 27 0 chr2 196353611 196353685 -56902898 + MER5C DNA MER1_type 1 76 -248 651 266 29 36 chr2 196353834 196354195 -56902388 + L1M4 LINE L1 3476 3866 -2280 1819 189 81 67 chr2 196354196 196354692 -56901891 + LTR54 LTR ERV1 8 510 0 1686 217 10 66 chr2 196354693 196355177 -56901406 + L1M4 LINE L1 3861 4317 -1829 22 0 0 0 chr2 196355389 196355411 -56901172 + AT_rich Low_complexity Low_complexity 1 22 0 445 176 56 0 chr2 196355537 196355645 -56900938 - L1MA8 LINE L1 -11 6280 6167 23 0 0 0 chr2 196355651 196355674 -56900909 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr2 196355990 196356020 -56900563 + AT_rich Low_complexity Low_complexity 1 30 0 226 400 58 0 chr2 196356188 196356308 -56900275 - L2 LINE L2 -7 3265 3139 1792 163 41 39 chr2 196356913 196357275 -56899308 - THE1B LTR MaLR 0 364 2 6423 109 8 2 chr2 196357276 196358172 -56898411 - THE1B-int LTR MaLR 0 1580 680 228 187 37 37 chr2 196358222 196358329 -56898254 + (TA)n Simple_repeat Simple_repeat 2 108 0 394 313 34 45 chr2 196359758 196359937 -56896646 - L2 LINE L2 -798 2516 2340 740 171 0 31 chr2 196360438 196360567 -56896016 + FLAM_A SINE Alu 1 125 -8 290 305 8 0 chr2 196360865 196360996 -56895587 + L1MDa LINE L1 1848 1979 -4561 459 0 0 0 chr2 196361000 196361051 -56895532 + (CA)n Simple_repeat Simple_repeat 2 52 0 1047 163 28 5 chr2 196361076 196361291 -56895292 + L1MA5A LINE L1 6073 6292 -5 737 286 74 62 chr2 196361385 196361839 -56894744 - MLT2B1 LTR ERVL -6 514 1 3954 116 10 10 chr2 196362080 196362682 -56893901 - LTR43 LTR ERV1 0 602 1 1739 143 8 57 chr2 196362846 196363209 -56893374 - MER4A LTR ERV1 0 664 261 560 115 31 10 chr2 196363209 196363305 -56893278 - MER4A LTR ERV1 -566 98 1 25 0 0 0 chr2 196363309 196363334 -56893249 + AT_rich Low_complexity Low_complexity 1 25 0 2250 109 54 14 chr2 196363500 196363850 -56892733 + THE1B LTR MaLR 1 364 0 2036 127 41 36 chr2 196363955 196364317 -56892266 + THE1B LTR MaLR 1 364 0 2194 107 3 0 chr2 196364502 196364802 -56891781 - AluSx SINE Alu -11 301 1 382 261 50 8 chr2 196365599 196365718 -56890865 - MER94 DNA DNA 0 134 11 351 259 112 65 chr2 196367129 196367168 -56889415 + Charlie8 DNA MER1_type 104 140 -201 1580 184 13 20 chr2 196367168 196367473 -56889110 + AluJo SINE Alu 1 303 -9 2228 97 3 0 chr2 196367473 196367762 -56888821 + AluSp SINE Alu 4 293 -20 351 259 112 65 chr2 196367762 196367891 -56888692 + Charlie8 DNA MER1_type 139 281 -60 569 145 47 70 chr2 196368123 196368295 -56888288 - MER53 DNA DNA 0 189 22 1742 210 85 38 chr2 196368523 196369018 -56887565 - MLT2B1 LTR ERVL -2 518 1 25 0 0 0 chr2 196369108 196369133 -56887450 + AT_rich Low_complexity Low_complexity 1 25 0 2053 113 0 3 chr2 196369608 196369890 -56886693 + AluSg SINE Alu 1 281 -29 281 150 17 17 chr2 196370360 196370420 -56886163 + HsTC2 DNA Tc2 3 62 -1836 2181 111 7 7 chr2 196370652 196370959 -56885624 - AluSq SINE Alu -6 307 1 534 224 15 22 chr2 196371233 196371367 -56885216 - L1PB4 LINE L1 0 6156 6024 2588 166 19 42 chr2 196371948 196372261 -56884322 - L1P LINE L1 -2709 3437 3141 2264 67 0 0 chr2 196372261 196372545 -56884038 - AluY SINE Alu 0 311 28 2588 166 19 42 chr2 196372545 196372798 -56883785 - L1P LINE L1 -3005 3141 2884 9971 152 14 9 chr2 196372798 196372996 -56883587 + L1PA11 LINE L1 3480 3675 -2499 215 0 67 0 chr2 196372996 196373026 -56883557 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 9971 152 14 9 chr2 196373026 196373466 -56883117 + L1PA11 LINE L1 3675 4111 -2063 2219 43 60 0 chr2 196373466 196373748 -56882835 + AluY SINE Alu 1 299 -12 9971 152 14 9 chr2 196373748 196375786 -56880797 + L1PA11 LINE L1 4111 6174 0 779 297 103 76 chr2 196376542 196376763 -56879820 + L2 LINE L2 1978 2191 -1123 1497 162 0 20 chr2 196376763 196377010 -56879573 + AluSx SINE Alu 1 242 -70 779 297 103 76 chr2 196377010 196377515 -56879068 + L2 LINE L2 2191 2724 -590 1512 177 50 41 chr2 196377516 196377878 -56878705 + MLT1A1 LTR MaLR 1 365 0 410 280 34 0 chr2 196377893 196378011 -56878572 + L1ME LINE L1 94 215 -5855 576 271 57 44 chr2 196378046 196378429 -56878154 + L1M4 LINE L1 2986 3373 -2773 2287 144 25 20 chr2 196378506 196378944 -56877639 + L1MA8 LINE L1 5848 6287 -4 1780 243 114 17 chr2 196378956 196379834 -56876749 + L1MC4 LINE L1 6935 7899 -143 609 283 102 34 chr2 196379855 196380148 -56876435 + L2 LINE L2 2996 3308 -5 231 281 188 62 chr2 196380547 196380707 -56875876 + L2 LINE L2 2894 3073 -199 34 84 0 0 chr2 196382246 196382329 -56874254 + AT_rich Low_complexity Low_complexity 1 83 0 1544 34 29 10 chr2 196382329 196382536 -56874047 - L1PA2 LINE L1 -3 6152 5942 212 314 6 40 chr2 196382646 196382821 -56873762 + G-rich Low_complexity Low_complexity 1 169 0 380 132 40 13 chr2 196382910 196382986 -56873597 + L1P LINE L1 4854 4931 -1215 36 40 0 0 chr2 196382990 196383040 -56873543 + AT_rich Low_complexity Low_complexity 1 50 0 312 206 67 12 chr2 196383040 196383205 -56873378 + (TTAAA)n Simple_repeat Simple_repeat 5 178 0 2146 23 0 0 chr2 196383211 196383468 -56873115 + L1P LINE L1 4922 5178 -968 659 222 142 0 chr2 196383669 196383831 -56872752 - FAM SINE Alu 0 49 1 195 167 0 0 chr2 196383996 196384038 -56872545 + A-rich Low_complexity Low_complexity 1 42 0 21 36 0 0 chr2 196384236 196384264 -56872319 + AT_rich Low_complexity Low_complexity 1 28 0 558 198 138 0 chr2 196384503 196384619 -56871964 - FLAM_C SINE Alu -1 132 1 261 248 30 69 chr2 196384804 196384905 -56871678 + MIR SINE MIR 10 106 -156 228 271 12 12 chr2 196384974 196385034 -56871549 + (TA)n Simple_repeat Simple_repeat 1 63 -22 1161 137 68 18 chr2 196385034 196385253 -56871330 - L1PB4 LINE L1 -1 6155 5926 228 271 12 12 chr2 196385253 196385277 -56871306 + (TA)n Simple_repeat Simple_repeat 62 85 0 363 256 47 0 chr2 196385960 196386046 -56870537 + L1MC4 LINE L1 6614 6703 -1339 2454 128 30 41 chr2 196386915 196387351 -56869232 - Tigger2a DNA MER2_type -3 431 1 596 199 35 157 chr2 196387351 196387384 -56869199 - L1M3b LINE L1 -4950 1331 1296 2275 71 7 14 chr2 196387384 196387678 -56868905 + AluSg SINE Alu 1 292 -18 596 199 35 157 chr2 196387678 196387930 -56868653 - L1M3b LINE L1 -4985 1296 1081 1772 189 21 44 chr2 196388031 196388104 -56868479 + LTR57-int LTR ERVL 704 777 -4566 2231 92 0 13 chr2 196388104 196388409 -56868174 - AluY SINE Alu -10 301 1 1772 189 21 44 chr2 196388409 196388764 -56867819 + LTR57-int LTR ERVL 777 1122 -4221 2900 130 47 4 chr2 196389250 196389780 -56866803 + LOR1-int LTR ERV1 1230 1782 -6338 1733 263 125 89 chr2 196389983 196390806 -56865777 - L1M3b LINE L1 -5376 905 53 252 152 22 22 chr2 196390814 196390860 -56865723 - LTR38 LTR ERV1 0 556 511 317 157 157 0 chr2 196390907 196390977 -56865606 + LOR1a LTR ERV1 1 81 -416 258 128 0 43 chr2 196390978 196391025 -56865558 - MER75 DNA T2_type -1 503 459 1930 172 20 60 chr2 196391042 196391443 -56865140 + LOR1b LTR ERV1 77 461 0 1147 197 29 16 chr2 196391477 196391721 -56864862 + LOR1b-int LTR ERV1 176 422 -1364 2243 123 88 5 chr2 196391840 196392248 -56864335 + LTR57-int LTR ERVL 282 723 -4620 1472 209 37 68 chr2 196392351 196392968 -56863615 + MER49-int LTR ERV1 3139 3736 -2862 1258 149 30 47 chr2 196393001 196393297 -56863286 + MER49-int LTR ERV1 3731 4021 -2577 724 150 10 140 chr2 196393536 196393729 -56862854 + MER49-int LTR ERV1 3786 3953 -4167 2595 106 16 0 chr2 196393791 196394160 -56862423 - THE1C LTR MaLR 0 375 1 594 135 68 52 chr2 196394212 196394417 -56862166 + MER49-int LTR ERV1 3014 4889 -1179 1702 170 8 3 chr2 196394583 196394897 -56861686 + MER49-int LTR ERV1 6439 7097 -3 207 0 0 0 chr2 196394902 196394925 -56861658 + (CAA)n Simple_repeat Simple_repeat 2 24 0 4250 145 25 43 chr2 196394925 196395675 -56860908 + MER49 LTR ERV1 16 752 -171 281 189 0 19 chr2 196396443 196396496 -56860087 + LTR38-int LTR ERV1 4795 4846 -108 703 273 90 42 chr2 196396560 196396975 -56859608 + LTR38 LTR ERV1 137 547 -9 2276 108 3 3 chr2 196397356 196397662 -56858921 - AluSx SINE Alu -6 306 1 202 322 0 0 chr2 196397892 196397982 -56858601 + T-rich Low_complexity Low_complexity 1 90 0 243 0 0 0 chr2 196398118 196398145 -56858438 + (TG)n Simple_repeat Simple_repeat 2 28 0 243 263 38 0 chr2 196398842 196398922 -56857661 + (TA)n Simple_repeat Simple_repeat 2 84 0 2314 109 3 0 chr2 196399613 196399925 -56856658 - AluSq SINE Alu 0 313 1 457 313 38 38 chr2 196400016 196400355 -56856228 - HAL1 LINE L1 -847 1660 1322 230 274 24 12 chr2 196400658 196400742 -56855841 + (TATATG)n Simple_repeat Simple_repeat 2 86 0 301 96 36 24 chr2 196400757 196400840 -56855743 + (TA)n Simple_repeat Simple_repeat 2 85 0 280 56 0 0 chr2 196401459 196401495 -56855088 - U2 snRNA snRNA -152 36 1 2242 95 0 7 chr2 196401837 196402131 -56854452 - AluSg SINE Alu -18 292 1 728 181 7 47 chr2 196402912 196403061 -56853522 + Tigger1 DNA MER2_type 1 143 -2275 16848 149 42 23 chr2 196403061 196406947 -56849636 - MER52A-int LTR ERV1 -3027 4064 1 2238 222 85 138 chr2 196406947 196408098 -56848485 - MER52A LTR ERV1 0 1755 666 198 389 47 40 chr2 196408862 196409011 -56847572 - L2 LINE L2 -6 3266 3117 514 213 40 59 chr2 196409111 196409313 -56847270 + L1ME LINE L1 5578 5775 -346 405 0 0 0 chr2 196410162 196410207 -56846376 + (TG)n Simple_repeat Simple_repeat 1 45 0 370 308 159 31 chr2 196411343 196411538 -56845045 - MLT1H LTR MaLR -9 540 321 333 217 54 0 chr2 196412428 196412557 -56844026 + (TA)n Simple_repeat Simple_repeat 1 136 0 196 324 87 40 chr2 196414441 196414614 -56841969 + MIR SINE MIR 5 185 -77 375 125 0 0 chr2 196414721 196414793 -56841790 + (GA)n Simple_repeat Simple_repeat 1 72 0 1417 281 16 8 chr2 196415008 196415389 -56841194 - LTR16A LTR ERVL -5 445 62 439 363 31 26 chr2 196415860 196416053 -56840530 + MIR SINE MIR 13 206 -56 1488 99 0 28 chr2 196416502 196416715 -56839868 - AluY SINE Alu -104 207 1 1549 211 24 84 chr2 196417259 196417809 -56838774 + MLT2B1 LTR ERVL 4 520 0 215 103 26 0 chr2 196418098 196418137 -56838446 + (TG)n Simple_repeat Simple_repeat 2 41 0 204 40 0 0 chr2 196418282 196418307 -56838276 + (TC)n Simple_repeat Simple_repeat 2 26 0 375 235 129 8 chr2 196418932 196419064 -56837519 - MIR SINE MIR -50 212 65 1093 236 84 37 chr2 196419442 196419713 -56836870 + MLT1C LTR MaLR 20 320 -147 2042 161 42 82 chr2 196419713 196419977 -56836606 + MER66B LTR ERV1 1 237 -249 1971 93 12 81 chr2 196419977 196420298 -56836285 + AluSx SINE Alu 1 299 -13 2042 161 42 82 chr2 196420298 196420536 -56836047 + MER66B LTR ERV1 237 483 -3 1093 236 84 37 chr2 196420536 196420692 -56835891 + MLT1C LTR MaLR 320 467 0 512 212 8 23 chr2 196420708 196420840 -56835743 + L1PB4 LINE L1 6024 6153 -3 21 0 0 0 chr2 196421090 196421111 -56835472 + AT_rich Low_complexity Low_complexity 1 21 0 197 294 15 15 chr2 196421174 196421242 -56835341 + MIR SINE MIR 46 113 -149 854 177 30 66 chr2 196421656 196421854 -56834729 + LTR8 LTR ERV1 1 208 -507 1608 191 46 51 chr2 196421855 196422269 -56834314 - LTR8A LTR ERV1 -110 617 206 8210 96 6 7 chr2 196422269 196423514 -56833069 + L1P LINE L1 2109 3352 -2794 5108 138 45 96 chr2 196423514 196424697 -56831886 + pTR5 LTR ERV1 744 2025 -413 355 255 10 0 chr2 196424697 196424795 -56831788 + LTR30 LTR ERV1 544 642 -80 1534 95 0 9 chr2 196424798 196425020 -56831563 + pTR5 LTR ERV1 172 391 -2047 13609 91 7 7 chr2 196425020 196425460 -56831123 + L1PA7 LINE L1 3347 3786 -2368 1868 103 0 8 chr2 196425460 196425713 -56830870 + AluSg SINE Alu 60 310 0 13609 91 7 7 chr2 196425713 196428081 -56828502 + L1PA7 LINE L1 3785 6150 -4 28 0 0 0 chr2 196428084 196428112 -56828471 + AT_rich Low_complexity Low_complexity 1 28 0 29 47 0 0 chr2 196428220 196428263 -56828320 + AT_rich Low_complexity Low_complexity 1 43 0 2105 128 144 5 chr2 196428639 196429015 -56827568 - MSTA LTR MaLR 0 428 1 26 50 0 0 chr2 196430023 196430063 -56826520 + AT_rich Low_complexity Low_complexity 1 40 0 333 268 0 31 chr2 196430347 196430444 -56826139 + L2 LINE L2 2671 2764 -550 188 243 108 14 chr2 196431457 196431531 -56825052 - L2 LINE L2 -797 2517 2437 181 359 64 0 chr2 196431600 196431678 -56824905 + L3 LINE CR1 1494 1576 -1 3253 118 16 2 chr2 196431721 196432211 -56824372 - LOR1a LTR ERV1 0 497 1 23 54 0 0 chr2 196432835 196432872 -56823711 + AT_rich Low_complexity Low_complexity 1 37 0 34 0 0 0 chr2 196433183 196433217 -56823366 + AT_rich Low_complexity Low_complexity 1 34 0 25 0 0 0 chr2 196433779 196433804 -56822779 + AT_rich Low_complexity Low_complexity 1 25 0 2938 101 113 121 chr2 196436904 196437588 -56818995 + L1MA5A LINE L1 5620 6297 0 1554 354 55 39 chr2 196439037 196440579 -56816004 + ERVL LTR ERVL 970 2653 -3111 1173 279 88 15 chr2 196440673 196440891 -56815692 + L1M4 LINE L1 2334 2535 -3611 1211 186 87 62 chr2 196440891 196441246 -56815337 - THE1B LTR MaLR 0 364 1 1173 279 88 15 chr2 196441246 196441701 -56814882 + L1M4 LINE L1 2535 3056 -3090 645 311 100 8 chr2 196441719 196442350 -56814233 + L1M4 LINE L1 3106 3794 -2352 799 226 43 25 chr2 196442351 196442586 -56813997 - MSTB LTR MaLR 0 426 188 192 97 0 0 chr2 196442586 196442617 -56813966 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 4157 123 14 25 chr2 196442618 196442646 -56813937 - L1PA14 LINE L1 -7 6154 6127 1966 136 7 0 chr2 196442646 196442941 -56813642 + AluSx SINE Alu 4 300 -12 4157 123 14 25 chr2 196442941 196443621 -56812962 - L1PA14 LINE L1 -34 6127 5454 1682 136 3 0 chr2 196443621 196443992 -56812591 + L1PA14 LINE L1 5083 5454 -707 1117 132 20 46 chr2 196443992 196444189 -56812394 - MSTB LTR MaLR -234 192 1 661 252 56 35 chr2 196444189 196444475 -56812108 + L1M4 LINE L1 3791 4082 -2064 251 193 53 0 chr2 196444533 196444590 -56811993 - MLT1A1 LTR MaLR -217 148 89 24 53 0 0 chr2 196444841 196444879 -56811704 + AT_rich Low_complexity Low_complexity 1 38 0 2398 70 0 3 chr2 196445421 196445733 -56810850 + AluY SINE Alu 1 311 0 268 252 114 24 chr2 196445742 196445865 -56810718 - MER94 DNA DNA 0 134 1 1836 201 60 10 chr2 196446383 196446781 -56809802 + MER47B DNA MER2_type 1 418 0 21 82 0 0 chr2 196447085 196447134 -56809449 + AT_rich Low_complexity Low_complexity 1 49 0 23 54 0 0 chr2 196447613 196447650 -56808933 + AT_rich Low_complexity Low_complexity 1 37 0 315 354 83 7 chr2 196447713 196447893 -56808690 - MIR SINE MIR -50 212 18 27 49 0 0 chr2 196448181 196448222 -56808361 + AT_rich Low_complexity Low_complexity 1 41 0 21 0 0 0 chr2 196449453 196449474 -56807109 + AT_rich Low_complexity Low_complexity 1 21 0 315 250 100 20 chr2 196450341 196450441 -56806142 + L2 LINE L2 3150 3257 -15 25 51 0 0 chr2 196450754 196450793 -56805790 + AT_rich Low_complexity Low_complexity 1 39 0 214 279 149 43 chr2 196451663 196451824 -56804759 - MIR SINE MIR -71 191 14 2130 104 21 0 chr2 196452059 196452348 -56804235 - AluSp SINE Alu -18 295 1 745 110 16 8 chr2 196453491 196453618 -56802965 - L1MA9 LINE L1 0 6312 6185 24 0 0 0 chr2 196454408 196454432 -56802151 + AT_rich Low_complexity Low_complexity 1 24 0 2746 226 60 7 chr2 196454620 196455240 -56801343 - MER82 DNA MER2_type 0 653 1 216 372 24 37 chr2 196455414 196455578 -56801005 + L2 LINE L2 2703 2864 -450 308 307 88 22 chr2 196456463 196456600 -56799983 - MIR3 SINE MIR -23 185 40 312 326 61 14 chr2 196458197 196458344 -56798239 - MLT1L LTR MaLR 0 615 462 21 0 0 0 chr2 196459756 196459777 -56796806 + AT_rich Low_complexity Low_complexity 1 21 0 2497 206 84 35 chr2 196459948 196460034 -56796549 + LTR9B LTR ERV1 7 87 -557 2379 90 3 3 chr2 196460034 196460345 -56796238 + AluSq SINE Alu 1 311 -2 2497 206 84 35 chr2 196460345 196460866 -56795717 + LTR9B LTR ERV1 87 644 0 328 262 243 0 chr2 196461399 196461506 -56795077 - HAL1 LINE L1 -625 1882 1750 791 318 36 22 chr2 196461527 196461971 -56794612 - HAL1 LINE L1 -821 1686 1237 24 32 0 0 chr2 196462826 196462857 -56793726 + AT_rich Low_complexity Low_complexity 1 31 0 348 272 48 0 chr2 196463409 196463512 -56793071 - MIR SINE MIR -87 175 68 1876 144 10 0 chr2 196463547 196463852 -56792731 + L1PA16 LINE L1 5857 6164 -2 244 218 0 36 chr2 196463867 196463922 -56792661 - MER5B DNA MER1_type -1 177 125 755 171 6 0 chr2 196463934 196464092 -56792491 + GA-rich Low_complexity Low_complexity 1 159 0 243 0 0 0 chr2 196464092 196464119 -56792464 + (CAGG)n Simple_repeat Simple_repeat 1 27 0 292 317 8 57 chr2 196464119 196464242 -56792341 - MER5B DNA MER1_type -61 117 1 199 353 29 0 chr2 196464250 196464318 -56792265 - MER5A DNA MER1_type 0 189 120 252 331 110 60 chr2 196464532 196465051 -56791532 - L2 LINE L2 -1662 1652 1108 24 0 0 0 chr2 196465091 196465115 -56791468 + AT_rich Low_complexity Low_complexity 1 24 0 1093 290 39 12 chr2 196465613 196466020 -56790563 + L1PBa LINE L1 37 454 -6409 1113 179 34 55 chr2 196466045 196466280 -56790303 + AluJb SINE Alu 1 230 -82 2494 290 28 41 chr2 196466303 196467383 -56789200 + L1PBa LINE L1 475 1540 -5323 4155 133 9 5 chr2 196467383 196468024 -56788559 + LTR9B LTR ERV1 1 644 0 430 256 0 0 chr2 196468031 196468117 -56788466 + L1PBa LINE L1 1545 1630 -5233 * 13303 212 33 21 chr2 196468091 196468741 -56787842 + L1PB3 LINE L1 1 642 -5569 378 42 0 0 chr2 196468741 196468789 -56787794 + (TGAA)n Simple_repeat Simple_repeat 2 49 0 13303 212 33 21 chr2 196468789 196472395 -56784188 + L1PB3 LINE L1 642 4203 -2008 213 39 0 0 chr2 196472395 196472421 -56784162 + (GAA)n Simple_repeat Simple_repeat 2 27 0 13303 212 33 21 chr2 196472421 196473778 -56782805 + L1PB3 LINE L1 4203 5858 -353 231 164 55 0 chr2 196473778 196473833 -56782750 - LTR66 LTR ERVL -171 439 382 13303 212 33 21 chr2 196473833 196474189 -56782394 + L1PB3 LINE L1 5858 6208 -3 2181 102 3 0 chr2 196474364 196474692 -56781891 + AluSp SINE Alu 1 329 0 363 252 97 22 chr2 196476690 196476916 -56779667 - L1M4 LINE L1 -1439 4707 4465 23 33 0 0 chr2 196476988 196477018 -56779565 + AT_rich Low_complexity Low_complexity 1 30 0 1664 134 3 91 chr2 196477074 196477416 -56779167 - AluSx SINE Alu 0 312 1 243 146 0 0 chr2 196477481 196477522 -56779061 + (TA)n Simple_repeat Simple_repeat 2 42 0 22 35 0 0 chr2 196477527 196477556 -56779027 + AT_rich Low_complexity Low_complexity 1 29 0 1387 217 39 0 chr2 196477715 196477996 -56778587 + AluJo SINE Alu 1 292 -20 26 50 0 0 chr2 196478727 196478767 -56777816 + AT_rich Low_complexity Low_complexity 1 40 0 288 0 0 0 chr2 196479532 196479564 -56777019 + (CA)n Simple_repeat Simple_repeat 2 33 0 197 108 27 0 chr2 196480975 196481012 -56775571 + (CA)n Simple_repeat Simple_repeat 1 38 0 188 200 0 40 chr2 196481027 196481077 -56775506 + L2 LINE L2 3262 3309 -4 1279 123 19 30 chr2 196481303 196481615 -56774968 - THE1B LTR MaLR 0 364 1 303 93 0 0 chr2 196484430 196484473 -56772110 + (TG)n Simple_repeat Simple_repeat 1 43 0 366 326 10 0 chr2 196484749 196484847 -56771736 + MER81 DNA DNA 16 114 0 551 279 146 13 chr2 196485119 196485345 -56771238 - MIR SINE MIR 0 262 7 924 83 7 21 chr2 196486617 196486762 -56769821 - MLT1B-int LTR MaLR -1228 143 1 1705 157 67 59 chr2 196486762 196487137 -56769446 - MLT1B LTR MaLR 0 390 13 242 350 60 0 chr2 196487183 196487283 -56769300 - MIR3 SINE MIR -47 161 56 2315 100 0 0 chr2 196487367 196487666 -56768917 - AluSx SINE Alu -13 299 1 22 70 0 0 chr2 196490322 196490365 -56766218 + AT_rich Low_complexity Low_complexity 1 43 0 2053 144 53 14 chr2 196490454 196490815 -56765768 + THE1C LTR MaLR 1 375 0 9603 133 23 38 chr2 196490816 196491243 -56765340 + THE1C-int LTR MaLR 2 434 -1146 2337 110 0 0 chr2 196491243 196491552 -56765031 - AluY SINE Alu -2 309 1 9603 133 23 38 chr2 196491552 196492727 -56763856 + THE1C-int LTR MaLR 434 1580 0 2001 132 58 30 chr2 196492727 196493092 -56763491 + THE1C LTR MaLR 1 375 0 821 209 75 21 chr2 196494709 196495070 -56761513 + MER63 DNA MER1_type 1 442 -619 716 211 0 1 chr2 196495102 196495323 -56761260 + MER63 DNA MER1_type 609 862 -199 300 341 14 0 chr2 196495391 196495529 -56761054 - HAL1 LINE L1 -833 1674 1535 2435 70 0 3 chr2 196495740 196496042 -56760541 - AluY SINE Alu -10 301 1 656 186 32 0 chr2 196496044 196496168 -56760415 - AluJo/FLAM SINE Alu -173 129 2 26 30 0 0 chr2 196496191 196496224 -56760359 + AT_rich Low_complexity Low_complexity 1 33 0 5903 100 13 37 chr2 196497186 196497381 -56759202 - L1PB1 LINE L1 -2 6149 5951 2255 88 3 0 chr2 196497381 196497665 -56758918 - AluY SINE Alu -26 285 1 5903 100 13 37 chr2 196497665 196498434 -56758149 - L1PB1 LINE L1 -200 5951 5211 12101 110 132 12 chr2 196498435 196500925 -56755658 - L1PBa LINE L1 -3437 3425 634 1163 170 0 0 chr2 196500925 196501125 -56755458 - L1PBa LINE L1 -6663 200 1 22 0 0 0 chr2 196501813 196501835 -56754748 + AT_rich Low_complexity Low_complexity 1 22 0 2090 225 41 41 chr2 196502251 196502664 -56753919 + L1MDa LINE L1 2397 2808 -3732 2471 169 33 18 chr2 196502664 196503062 -56753521 - LOR1b LTR ERV1 0 461 54 2071 112 10 7 chr2 196503062 196503357 -56753226 - AluSg SINE Alu -14 296 1 2471 169 33 18 chr2 196503357 196503408 -56753175 - LOR1b LTR ERV1 -407 54 5 2090 225 41 41 chr2 196503408 196504030 -56752553 + L1MDa LINE L1 2808 3434 -3106 409 209 115 0 chr2 196504033 196504172 -56752411 + L1MDa LINE L1 3987 4141 -2399 315 49 0 0 chr2 196504189 196504230 -56752353 + (CA)n Simple_repeat Simple_repeat 1 41 0 367 132 0 0 chr2 196504230 196504283 -56752300 + MST-int LTR MaLR 29 81 -1570 1782 111 107 127 chr2 196504283 196504779 -56751804 + LTR21A LTR ERV1 1 486 -19 358 113 84 14 chr2 196504779 196504850 -56751733 + THE1C-int LTR MaLR 78 153 -1427 3794 143 68 8 chr2 196504850 196505473 -56751110 + THE1C-int LTR MaLR 97 762 -818 2476 101 93 19 chr2 196505473 196505890 -56750693 + LTR7 LTR ERV1 1 448 -2 3794 143 68 8 chr2 196505890 196505908 -56750675 + THE1C-int LTR MaLR 762 777 -803 14554 99 18 24 chr2 196505908 196508594 -56747989 + HERVH LTR ERV1 16 2992 -4721 5566 110 15 4 chr2 196508601 196509445 -56747138 + HERVH LTR ERV1 3140 3993 -3720 4353 143 0 1 chr2 196509447 196510110 -56746473 + HERVH LTR ERV1 4488 5149 -2564 1361 130 19 0 chr2 196510111 196510327 -56746256 + HERVH LTR ERV1 5600 5819 -1894 2368 79 53 21 chr2 196510327 196510705 -56745878 + HERVH LTR ERV1 7324 7713 0 2546 96 96 7 chr2 196510705 196511112 -56745471 + LTR7 LTR ERV1 1 443 -7 5264 132 27 4 chr2 196511122 196511926 -56744657 + THE1C-int LTR MaLR 758 1580 0 1447 133 4 13 chr2 196511926 196512152 -56744431 + THE1C LTR MaLR 1 224 -151 2000 168 59 57 chr2 196512161 196512619 -56743964 + LTR2B LTR ERV1 32 490 0 1064 146 11 11 chr2 196512619 196512783 -56743800 + THE1C LTR MaLR 212 375 0 928 216 78 26 chr2 196512830 196513254 -56743329 + L1MDa LINE L1 4185 4756 -1784 701 130 68 20 chr2 196513259 196513405 -56743178 + L1MD1 LINE L1 6090 6242 0 25 51 0 0 chr2 196513736 196513775 -56742808 + AT_rich Low_complexity Low_complexity 1 39 0 869 179 174 134 chr2 196515037 196515364 -56741219 + MSTD LTR MaLR 2 348 -48 3408 88 8 14 chr2 196515364 196515854 -56740729 + L1PA8A LINE L1 5643 6129 -2 869 179 174 134 chr2 196515854 196515906 -56740677 + MSTD LTR MaLR 348 396 0 1628 183 35 3 chr2 196515906 196516223 -56740360 + MSTD-int LTR MaLR 1 327 -1408 1967 166 45 38 chr2 196516223 196516530 -56740053 + MLT2A2 LTR ERVL 1 313 -241 1631 126 129 36 chr2 196516530 196516863 -56739720 - THE1B LTR MaLR 0 364 1 1967 166 45 38 chr2 196516863 196517107 -56739476 + MLT2A2 LTR ERVL 313 554 0 4598 256 88 39 chr2 196517150 196517417 -56739166 + MSTD-int LTR MaLR 350 603 -1132 2067 87 4 4 chr2 196517417 196517693 -56738890 + AluSq SINE Alu 1 276 -37 216 0 0 0 chr2 196517697 196517721 -56738862 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 4598 256 88 39 chr2 196517721 196518770 -56737813 + MSTD-int LTR MaLR 605 1735 0 1354 188 95 63 chr2 196518774 196519152 -56737431 + MSTD LTR MaLR 5 394 -2 1371 226 75 20 chr2 196522134 196522483 -56734100 + MLT1A2 LTR MaLR 1 368 -6 216 349 114 54 chr2 196522676 196522974 -56733609 - L2 LINE L2 -2 3270 2955 439 247 14 68 chr2 196523723 196523869 -56732714 + MER103 DNA DNA 8 145 -21 28 29 0 0 chr2 196524344 196524379 -56732204 + AT_rich Low_complexity Low_complexity 1 35 0 295 353 10 64 chr2 196524547 196524751 -56731832 + L1ME LINE L1 270 462 -5743 1115 140 0 0 chr2 196524756 196524913 -56731670 - LOR1a LTR ERV1 0 497 341 525 273 99 88 chr2 196524928 196525522 -56731061 + L1ME LINE L1 1209 1809 -4587 24 32 0 0 chr2 196525900 196525931 -56730652 + AT_rich Low_complexity Low_complexity 1 31 0 2418 84 7 0 chr2 196526835 196527131 -56729452 + AluSc SINE Alu 1 298 -11 21 71 0 0 chr2 196528488 196528530 -56728053 + AT_rich Low_complexity Low_complexity 1 42 0 26 88 0 0 chr2 196528795 196528863 -56727720 + AT_rich Low_complexity Low_complexity 1 68 0 2663 218 23 35 chr2 196529513 196530168 -56726415 + MLT1D-int LTR MaLR 237 883 -488 1764 209 16 82 chr2 196530520 196530960 -56725623 + MLT1D-int LTR MaLR 961 1371 0 1382 236 126 32 chr2 196530960 196531422 -56725161 + MLT1D LTR MaLR 1 505 0 1343 244 51 3 chr2 196531423 196531738 -56724845 - L1M4b LINE L1 -6527 332 3 240 286 0 0 chr2 196533454 196533517 -56723066 + (TATATG)n Simple_repeat Simple_repeat 3 65 0 28 29 0 0 chr2 196533681 196533716 -56722867 + AT_rich Low_complexity Low_complexity 1 35 0 26 30 0 0 chr2 196534127 196534160 -56722423 + AT_rich Low_complexity Low_complexity 1 33 0 190 208 56 56 chr2 196534835 196534907 -56721676 - L2 LINE L2 0 3313 3242 184 273 212 20 chr2 196535157 196535256 -56721327 + L2 LINE L2 3138 3255 -17 21 0 0 0 chr2 196535488 196535509 -56721074 + AT_rich Low_complexity Low_complexity 1 21 0 544 308 199 5 chr2 196536299 196536666 -56719917 + L2 LINE L2 2876 3313 0 584 199 20 122 chr2 196536875 196537000 -56719583 + L1M4 LINE L1 3163 3299 -2847 1773 156 4 0 chr2 196537000 196537275 -56719308 + AluSx SINE Alu 32 307 -5 584 199 20 122 chr2 196537275 196537345 -56719238 + L1M4 LINE L1 3299 3321 -2825 1949 132 4 0 chr2 196537345 196537626 -56718957 + AluSc SINE Alu 3 284 -25 584 199 20 122 chr2 196537626 196537725 -56718858 + L1M4 LINE L1 3321 3428 -2718 2368 66 3 3 chr2 196538033 196538338 -56718245 + AluY SINE Alu 1 305 -6 791 163 0 0 chr2 196538666 196538801 -56717782 + L1MA7 LINE L1 5742 5876 -415 271 377 63 17 chr2 196539361 196539566 -56717017 - MIR SINE MIR -48 214 3 22 35 0 0 chr2 196540117 196540146 -56716437 + AT_rich Low_complexity Low_complexity 1 29 0 1544 168 70 25 chr2 196540195 196540553 -56716030 - THE1C LTR MaLR -1 374 1 5637 170 17 154 chr2 196541407 196543014 -56713569 - L1PA15 LINE L1 -2 6814 4989 1622 95 16 32 chr2 196543014 196543267 -56713316 - MER4B LTR ERV1 0 610 362 5637 170 17 154 chr2 196543267 196543310 -56713273 - L1PA15 LINE L1 -1827 4989 4942 621 134 13 8 chr2 196543310 196543516 -56713067 - MER4A LTR ERV1 -351 313 1 5637 170 17 154 chr2 196543516 196544158 -56712425 - L1PA15 LINE L1 -1874 4942 4607 4094 138 85 17 chr2 196544158 196544931 -56711652 + LTR1B LTR ERV1 1 826 0 5637 170 17 154 chr2 196544931 196545434 -56711149 - L1PA15 LINE L1 -2209 4607 4037 3611 225 53 24 chr2 196545462 196546694 -56709889 - L1PA15 LINE L1 -4120 2677 1426 2190 316 17 60 chr2 196546823 196547189 -56709394 - L1PA15 LINE L1 -5934 853 473 2345 152 8 3 chr2 196547189 196547551 -56709032 - THE1B LTR MaLR 0 364 1 2190 316 17 60 chr2 196547551 196548074 -56708509 - L1PA15 LINE L1 -6314 473 2 363 230 23 0 chr2 196550144 196550231 -56706352 + MER89 LTR ERV1 1 89 -470 * 1785 205 31 3 chr2 196550206 196550557 -56706026 + MER89 LTR ERV1 199 559 0 3675 250 34 60 chr2 196551109 196552196 -56704387 + MER69B DNA AcHobo 2 1055 -1471 2316 89 7 3 chr2 196552196 196552498 -56704085 - AluSq SINE Alu -10 303 1 3675 250 34 60 chr2 196552498 196552638 -56703945 + MER69B DNA AcHobo 1055 1197 -29 239 268 183 33 chr2 196553058 196553211 -56703372 + L2 LINE L2 3113 3288 -25 187 262 0 98 chr2 196553256 196553317 -56703266 - L2 LINE L2 -36 3236 3182 259 311 60 55 chr2 196553448 196553631 -56702952 + MIR SINE MIR 8 191 -71 239 324 28 66 chr2 196554586 196554799 -56701784 + MLT1K LTR MaLR 208 412 -176 260 293 8 68 chr2 196555378 196555511 -56701072 + MLT1J LTR MaLR 221 345 -166 249 167 0 0 chr2 196555498 196555540 -56701043 - MSTC LTR MaLR -382 46 5 * 23 0 0 0 chr2 196556681 196556704 -56699879 + AT_rich Low_complexity Low_complexity 1 23 0 209 280 40 0 chr2 196556758 196556808 -56699775 + L2 LINE L2 3245 3296 -17 642 363 11 14 chr2 196558167 196558522 -56698061 + L1PA13 LINE L1 5 358 -6429 248 266 13 0 chr2 196558986 196559065 -56697518 - MLT1E2 LTR MaLR -9 617 538 1125 194 19 88 chr2 196559374 196559693 -56696890 - AluSx SINE Alu -3 299 3 750 242 62 27 chr2 196560100 196560356 -56696227 + LTR8 LTR ERV1 1 265 -426 * 808 269 46 53 chr2 196560301 196560714 -56695869 - LTR8A LTR ERV1 -112 615 206 1294 259 0 12 chr2 196560721 196561142 -56695441 + L1P LINE L1 2117 2532 -3614 445 271 53 18 chr2 196561570 196561740 -56694843 + L1MEc LINE L1 1582 1757 -4639 24 32 0 0 chr2 196562166 196562197 -56694386 + AT_rich Low_complexity Low_complexity 1 31 0 20642 67 2 4 chr2 196564093 196567415 -56689168 - L1P LINE L1 -2597 3549 105 207 204 0 0 chr2 196567544 196567588 -56688995 + (TA)n Simple_repeat Simple_repeat 1 44 0 1565 252 42 31 chr2 196568319 196568898 -56687685 + L1MD2 LINE L1 762 1346 -5063 * 5248 263 58 22 chr2 196568877 196571708 -56684875 + L1MD2 LINE L1 3662 6600 -19 1036 230 67 86 chr2 196571717 196572196 -56684387 + L1MD2 LINE L1 5880 6349 -10 227 293 0 24 chr2 196573053 196573135 -56683448 + MER92B LTR ERV1 1 80 -556 778 183 17 29 chr2 196573156 196573365 -56683218 + AluJb SINE Alu 140 346 0 1636 228 97 18 chr2 196573367 196573810 -56682773 + MER92C LTR ERV1 65 542 -12 21 36 0 0 chr2 196573900 196573928 -56682655 + AT_rich Low_complexity Low_complexity 1 28 0 302 131 28 75 chr2 196574021 196574128 -56682455 - L1MA7 LINE L1 -1 6290 6189 224 284 110 18 chr2 196574846 196574955 -56681628 + L2 LINE L2 2560 2678 -636 229 341 126 28 chr2 196575112 196575326 -56681257 + L2 LINE L2 2826 3060 -253 398 304 101 92 chr2 196576344 196576798 -56679785 + L1ME LINE L1 653 1110 -5095 742 167 0 16 chr2 196576823 196576949 -56679634 + Tigger4(Zombi) DNA MER2_type 2608 2731 0 261 268 41 49 chr2 196576949 196577001 -56679582 + L1ME LINE L1 1571 1622 -4774 2402 111 31 0 chr2 196577001 196577354 -56679229 + THE1B LTR MaLR 1 364 0 261 268 41 49 chr2 196577354 196577424 -56679159 + L1ME LINE L1 1622 1692 -4704 1340 296 73 47 chr2 196579124 196579936 -56676647 - L2 LINE L2 -437 2877 2045 766 184 32 22 chr2 196581141 196581326 -56675257 + MER53 DNA DNA 1 187 -2 21 0 0 0 chr2 196581703 196581724 -56674859 + AT_rich Low_complexity Low_complexity 1 21 0 2078 95 4 0 chr2 196581761 196582034 -56674549 - AluSx SINE Alu -38 274 1 21 0 0 0 chr2 196583839 196583860 -56672723 + AT_rich Low_complexity Low_complexity 1 21 0 377 272 20 0 chr2 196584520 196584667 -56671916 + L1ME LINE L1 4576 4725 -1490 10412 216 26 15 chr2 196584680 196587001 -56669582 + L1PA15 LINE L1 2 2360 -4437 864 218 26 0 chr2 196586999 196587192 -56669391 + L1PA15 LINE L1 2862 3059 -3738 * 1166 118 53 12 chr2 196587192 196587492 -56669091 - THE1C LTR MaLR 0 375 13 12390 200 9 0 chr2 196587503 196591271 -56665312 + L1PA15 LINE L1 3050 6810 -6 800 232 72 21 chr2 196591453 196591950 -56664633 + L1ME LINE L1 5119 5638 -595 933 244 53 31 chr2 196591970 196592563 -56664020 - L1MCa LINE L1 -4228 2379 1621 1302 198 88 4 chr2 196592580 196592698 -56663885 + AluJb SINE Alu 2 109 -203 239 71 24 0 chr2 196592698 196592740 -56663843 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1302 198 88 4 chr2 196592740 196592894 -56663689 + AluJb SINE Alu 109 297 -15 338 185 30 67 chr2 196592896 196593031 -56663552 - L1MCa LINE L1 -4996 1430 1301 195 262 0 16 chr2 196593389 196593450 -56663133 + MIR SINE MIR 66 125 -137 349 355 57 9 chr2 196593742 196593953 -56662630 + MIR SINE MIR 27 247 -15 2096 127 10 0 chr2 196594447 196594576 -56662007 + AluSx SINE Alu 1 127 -185 2544 58 6 0 chr2 196594576 196594887 -56661696 + AluSp SINE Alu 1 313 0 2096 127 10 0 chr2 196594887 196595065 -56661518 + AluSx SINE Alu 127 311 -1 197 143 48 0 chr2 196595122 196595164 -56661419 + GA-rich Low_complexity Low_complexity 3 46 0 295 268 100 73 chr2 196596139 196596359 -56660224 - Charlie8 DNA MER1_type -2185 232 7 21 36 0 0 chr2 196596986 196597014 -56659569 + AT_rich Low_complexity Low_complexity 1 28 0 2285 87 6 6 chr2 196597365 196597676 -56658907 - AluY SINE Alu 0 311 1 33 0 0 0 chr2 196597683 196597716 -56658867 + AT_rich Low_complexity Low_complexity 1 33 0 327 328 93 5 chr2 196598841 196599045 -56657538 - L3b LINE CR1 -258 1325 1104 600 276 8 82 chr2 196599552 196599795 -56656788 - MIR SINE MIR 0 262 38 1813 125 60 41 chr2 196602092 196602460 -56654123 - THE1C LTR MaLR 0 375 1 2458 49 10 3 chr2 196602591 196602895 -56653688 - AluY SINE Alu -5 306 1 352 208 0 0 chr2 196603324 196603396 -56653187 + Tigger1 DNA MER2_type 74 145 -2273 3520 145 16 25 chr2 196603406 196603923 -56652660 + Tigger1 DNA MER2_type 1785 2296 -122 2658 39 0 3 chr2 196603923 196604231 -56652352 - AluY SINE Alu -4 307 1 3520 145 16 25 chr2 196604231 196604353 -56652230 + Tigger1 DNA MER2_type 2296 2418 0 8078 61 109 6 chr2 196605822 196607018 -56649565 + L1P LINE L1 56 1374 -4772 677 186 14 29 chr2 196607233 196607373 -56649210 + Tigger7 DNA MER2_type 10 147 -558 4723 130 31 16 chr2 196607380 196608148 -56648435 + LTR17 LTR ERV1 1 780 0 5968 105 1 13 chr2 196608252 196609189 -56647394 + HERVH LTR ERV1 2062 2987 -4726 922 127 7 0 chr2 196609183 196609333 -56647250 + HERVH LTR ERV1 3140 3290 -4423 * 5088 109 23 4 chr2 196609337 196610625 -56645958 + HERVH LTR ERV1 3505 5088 -2003 672 192 14 7 chr2 196610765 196610911 -56645672 - MER67D LTR ERV1 -361 153 7 31 26 0 0 chr2 196611055 196611093 -56645490 + AT_rich Low_complexity Low_complexity 1 38 0 271 267 9 38 chr2 196614903 196615008 -56641575 + CT-rich Low_complexity Low_complexity 5 106 0 23 0 0 0 chr2 196616999 196617022 -56639561 + AT_rich Low_complexity Low_complexity 1 23 0 1418 198 58 92 chr2 196617030 196617509 -56639074 - MLT1C LTR MaLR -4 463 1 2628 104 3 8 chr2 196617603 196617969 -56638614 + THE1B LTR MaLR 1 364 0 1131 253 73 7 chr2 196618503 196619026 -56637557 + MLT2F LTR ERVL 3 604 -59 970 194 41 16 chr2 196619029 196619271 -56637312 - L1MB8 LINE L1 -183 5995 5748 1119 204 118 59 chr2 196619272 196619514 -56637069 - L1MB8 LINE L1 -1224 4922 4696 2129 128 0 3 chr2 196619514 196619812 -56636771 + AluSx SINE Alu 1 297 -15 1119 204 118 59 chr2 196619812 196620026 -56636557 - L1MB8 LINE L1 -1450 4696 4439 6777 90 21 21 chr2 196620154 196621720 -56634863 - HERVH LTR ERV1 -5902 1811 1 2713 79 108 5 chr2 196621722 196622128 -56634455 - LTR7 LTR ERV1 -2 448 1 2212 122 0 0 chr2 196622411 196622706 -56633877 + AluSx SINE Alu 1 295 -17 883 292 83 19 chr2 196622923 196623296 -56633287 - MLT1J2 LTR MaLR -11 439 43 228 250 38 0 chr2 196623428 196623508 -56633075 - MER103 DNA DNA -81 85 3 2214 107 3 3 chr2 196626298 196626596 -56629987 - AluSg SINE Alu -12 298 1 238 348 38 32 chr2 196627086 196627244 -56629339 + L2 LINE L2 3155 3313 0 26 0 0 0 chr2 196627351 196627377 -56629206 + AT_rich Low_complexity Low_complexity 1 26 0 367 269 200 8 chr2 196627450 196627580 -56629003 - MER5A DNA MER1_type -1 188 34 2130 105 34 3 chr2 196627830 196628126 -56628457 + AluSx SINE Alu 1 305 -7 614 250 75 0 chr2 196628190 196628350 -56628233 + MER5B DNA MER1_type 2 173 -5 364 219 115 104 chr2 196628649 196628937 -56627646 - LTR43 LTR ERV1 -132 470 180 1206 271 40 44 chr2 196629667 196630261 -56626322 + MER20B DNA MER1_type 147 738 -45 21383 26 0 0 chr2 196630689 196635319 -56621264 + L1PA3 LINE L1 1524 6155 0 185 248 77 120 chr2 196635577 196635694 -56620889 + L2 LINE L2 3154 3265 -48 529 326 3 28 chr2 196636523 196636728 -56619855 + MIR SINE MIR 3 204 -58 225 211 0 0 chr2 196636728 196636780 -56619803 + (TA)n Simple_repeat Simple_repeat 1 52 0 308 296 0 0 chr2 196636783 196636871 -56619712 - L1MC4 LINE L1 -1339 6703 6616 25 0 0 0 chr2 196638017 196638042 -56618541 + AT_rich Low_complexity Low_complexity 1 25 0 675 201 6 25 chr2 196639081 196639240 -56617343 + MER63 DNA MER1_type 482 637 -424 22 35 0 0 chr2 196639336 196639365 -56617218 + AT_rich Low_complexity Low_complexity 1 29 0 195 188 0 0 chr2 196640476 196640524 -56616059 + GA-rich Low_complexity Low_complexity 1 48 0 309 74 19 56 chr2 196642120 196642174 -56614409 + L1MC3 LINE L1 6128 6179 -1606 6219 180 46 44 chr2 196642377 196643474 -56613109 + L1MC3 LINE L1 6366 7468 -317 1977 116 32 26 chr2 196643474 196643784 -56612799 + AluSx SINE Alu 1 312 0 6219 180 46 44 chr2 196643784 196644103 -56612480 + L1MC3 LINE L1 7468 7785 0 239 325 13 13 chr2 196646360 196646437 -56610146 - L2 LINE L2 -5 3308 3232 945 229 37 14 chr2 196646462 196646676 -56609907 - MER20B DNA MER1_type 0 219 1 327 141 28 0 chr2 196647667 196647738 -56608845 + L1MA10 LINE L1 6262 6334 0 320 331 78 12 chr2 196647918 196648084 -56608499 - MER5B DNA MER1_type 0 178 2 516 355 92 27 chr2 196649025 196649541 -56607042 + L2 LINE L2 2690 3244 -28 368 306 36 0 chr2 196650046 196650157 -56606426 + MIR SINE MIR 54 168 -94 626 301 41 62 chr2 196651334 196651722 -56604861 - L2 LINE L2 0 3313 2934 1396 215 50 43 chr2 196651743 196652161 -56604422 - MLT1D LTR MaLR -9 496 76 265 213 175 0 chr2 196652181 196652261 -56604322 - L1M4 LINE L1 -6433 109 16 282 273 40 47 chr2 196652262 196652412 -56604171 - L2 LINE L2 -615 2699 2551 21 0 0 0 chr2 196653036 196653057 -56603526 + AT_rich Low_complexity Low_complexity 1 21 0 186 118 0 0 chr2 196654378 196654412 -56602171 + (TC)n Simple_repeat Simple_repeat 1 34 0 288 0 0 0 chr2 196654412 196654444 -56602139 + (TG)n Simple_repeat Simple_repeat 1 32 0 21 71 0 0 chr2 196654584 196654626 -56601957 + AT_rich Low_complexity Low_complexity 1 42 0 236 330 11 11 chr2 196654724 196654812 -56601771 - MIR SINE MIR -63 145 58 246 336 36 64 chr2 196656236 196656376 -56600207 + L2 LINE L2 3178 3313 0 300 53 0 0 chr2 196657645 196657683 -56598900 + (ATG)n Simple_repeat Simple_repeat 2 39 0 277 378 79 48 chr2 196658454 196658848 -56597735 - L2 LINE L2 -353 2961 2556 210 71 0 0 chr2 196659376 196659404 -56597179 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 2156 127 3 0 chr2 196659543 196659850 -56596733 - AluSx SINE Alu -4 308 1 29 90 0 0 chr2 196660093 196660171 -56596412 + AT_rich Low_complexity Low_complexity 1 78 0 217 187 28 19 chr2 196660220 196660327 -56596256 + (TA)n Simple_repeat Simple_repeat 1 108 0 700 41 0 31 chr2 196660494 196660592 -56595991 - L1PA2 LINE L1 -1 6154 6060 2385 64 0 0 chr2 196661263 196661558 -56595025 - AluY SINE Alu -16 295 1 2355 92 3 0 chr2 196661653 196661959 -56594624 - AluSg SINE Alu -1 309 3 2052 210 74 15 chr2 196661961 196662499 -56594084 - L1MD2 LINE L1 0 6359 5790 1249 243 58 60 chr2 196662500 196663067 -56593516 - L1MD2 LINE L1 -1417 4729 4164 185 0 40 0 chr2 196663346 196663371 -56593212 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1911 118 14 7 chr2 196664427 196664715 -56591868 - AluSg SINE Alu -20 290 1 225 300 0 0 chr2 196667030 196667090 -56589493 - MLT1J LTR MaLR -340 171 112 864 251 109 5 chr2 196667956 196668351 -56588232 + L1M4 LINE L1 3141 3576 -2570 * 1333 192 22 10 chr2 196668346 196668658 -56587925 - L1MA9 LINE L1 -743 5403 5088 2656 199 56 18 chr2 196668670 196669292 -56587291 + L1MA9 LINE L1 5434 6079 -233 547 186 0 0 chr2 196669297 196669399 -56587184 + L1MA9 LINE L1 6187 6288 -24 4243 111 7 26 chr2 196670248 196670935 -56585648 - HERVH LTR ERV1 -6239 1474 801 1137 201 28 9 chr2 196671017 196671422 -56585161 - HERVH LTR ERV1 -7267 446 1 413 91 0 0 chr2 196671422 196671477 -56585106 - LTR7 LTR ERV1 0 450 396 547 82 0 0 chr2 196671478 196671551 -56585032 - Alu SINE Alu -16 295 223 1504 101 122 28 chr2 196671553 196671877 -56584706 - LTR7 LTR ERV1 -48 402 1 24 96 0 0 chr2 196672057 196672130 -56584453 + AT_rich Low_complexity Low_complexity 1 73 0 1401 239 43 51 chr2 196672900 196673369 -56583214 - MLT1C LTR MaLR 0 467 3 456 291 17 8 chr2 196673741 196673858 -56582725 - MER5A DNA MER1_type -1 188 71 241 268 0 28 chr2 196673859 196673930 -56582653 - LTR33A LTR ERVL 0 523 455 2065 88 3 10 chr2 196674215 196674520 -56582063 - LTR7 LTR ERV1 -2 448 146 2154 122 48 13 chr2 196674639 196675017 -56581566 - HERVH LTR ERV1 -1 7712 7322 1403 125 19 0 chr2 196675015 196675231 -56581352 - HERVH LTR ERV1 -1894 5819 5600 * 1864 167 0 0 chr2 196675235 196675535 -56581048 - HERVH LTR ERV1 -2567 5146 4847 1442 207 10 24 chr2 196675687 196675982 -56580601 - AluJb SINE Alu -19 293 3 576 204 19 25 chr2 196675992 196676149 -56580434 - L1M4 LINE L1 -1712 4434 4279 978 250 44 0 chr2 196676154 196676474 -56580109 - L1M4 LINE L1 -2852 3294 2961 2096 94 10 30 chr2 196676474 196676773 -56579810 - AluSg SINE Alu -17 293 1 200 222 0 0 chr2 196676866 196676902 -56579681 + (CATA)n Simple_repeat Simple_repeat 4 39 0 189 74 0 0 chr2 196676963 196676990 -56579593 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 2358 124 5 16 chr2 196678312 196678691 -56577892 - THE1C LTR MaLR 0 375 1 1728 139 3 100 chr2 196678808 196679167 -56577416 - MER4A LTR ERV1 0 664 341 516 110 88 11 chr2 196679183 196679274 -56577309 - MER4A LTR ERV1 -566 98 1 878 181 30 0 chr2 196679881 196680047 -56576536 + FAM SINE Alu 1 171 -4 336 328 45 22 chr2 196680477 196680611 -56575972 - MIR3 SINE MIR -58 150 14 873 300 91 61 chr2 196680814 196681308 -56575275 + L2 LINE L2 2805 3313 0 217 308 106 19 chr2 196681823 196681927 -56574656 + L2 LINE L2 3159 3271 -1 435 225 11 0 chr2 196682081 196682170 -56574413 + Tigger1 DNA MER2_type 2328 2417 -1 * 805 136 111 1 chr2 196682170 196682360 -56574223 - MER44D DNA MER2_type -101 508 1 288 325 32 39 chr2 196683200 196683354 -56573229 - MIR SINE MIR -10 252 100 1720 169 10 3 chr2 196683436 196683732 -56572851 + AluJb SINE Alu 2 299 -13 318 322 17 25 chr2 196685462 196685580 -56571003 + L2 LINE L2 2847 2963 -309 414 285 78 16 chr2 196685584 196685777 -56570806 - MLT1L LTR MaLR 0 615 411 1696 209 0 9 chr2 196686470 196686785 -56569798 + AluJo SINE Alu 1 312 0 700 168 0 24 chr2 196688062 196688187 -56568396 + FLAM_C SINE Alu 5 126 -17 292 221 63 11 chr2 196688581 196688676 -56567907 - MER91C DNA MER1_type -40 100 1 1951 119 41 3 chr2 196688777 196689070 -56567513 - AluSx SINE Alu -8 304 1 267 318 83 8 chr2 196689487 196689619 -56566964 + MLT1J LTR MaLR 153 294 -217 299 284 30 30 chr2 196689667 196689801 -56566782 + MLT1J LTR MaLR 378 511 0 373 288 192 49 chr2 196689801 196690145 -56566438 + L2 LINE L2 2217 2609 -705 259 327 50 77 chr2 196690151 196690490 -56566093 + L2 LINE L2 2776 3116 -156 2237 91 0 7 chr2 196690491 196690788 -56565795 - AluSg SINE Alu -15 295 1 2250 109 3 7 chr2 196691738 196692042 -56564541 - AluSx SINE Alu -7 305 3 5291 165 62 37 chr2 196693702 196694226 -56562357 - L1MC1 LINE L1 0 6333 5823 2364 98 3 0 chr2 196694226 196694532 -56562051 - AluSg SINE Alu -2 308 2 5291 165 62 37 chr2 196694532 196695257 -56561326 - L1MC1 LINE L1 -510 5823 5061 1588 221 42 12 chr2 196695259 196695689 -56560894 - L1MC1 LINE L1 -1293 4853 4411 245 267 67 13 chr2 196695689 196695764 -56560819 - MER2 DNA MER2_type 0 345 267 878 190 125 22 chr2 196695797 196695981 -56560602 - MER2 DNA MER2_type -142 203 1 2840 247 22 16 chr2 196696002 196696837 -56559746 - L1MC1 LINE L1 -1749 4397 3558 210 283 81 30 chr2 196697760 196697859 -56558724 - MIR SINE MIR 0 262 159 411 220 67 135 chr2 196697859 196697889 -56558694 + LTR9 LTR ERV1 1 31 -613 2146 108 14 7 chr2 196697889 196698185 -56558398 + AluSx SINE Alu 3 300 -12 411 220 67 135 chr2 196698185 196698406 -56558177 + LTR9 LTR ERV1 31 226 -418 2289 102 13 0 chr2 196698654 196698958 -56557625 - AluSq SINE Alu -5 308 1 991 164 80 152 chr2 196698977 196699392 -56557191 + LTR9B LTR ERV1 260 644 0 220 373 56 16 chr2 196699412 196699538 -56557045 - MIR SINE MIR -125 137 7 2321 71 3 49 chr2 196699581 196699906 -56556677 - AluY SINE Alu -1 310 1 231 143 41 20 chr2 196700166 196700215 -56556368 + LTR49 LTR ERV1 468 517 -78 1763 176 0 20 chr2 196700420 196700716 -56555867 - AluJo SINE Alu -13 299 10 270 263 32 32 chr2 196701659 196701754 -56554829 + MARNA DNA Mariner 271 365 -221 200 303 0 0 chr2 196702296 196702362 -56554221 + (TG)n Simple_repeat Simple_repeat 1 66 0 227 342 0 45 chr2 196703180 196703291 -56553292 + L2 LINE L2 2554 2659 -655 403 336 70 19 chr2 196703393 196703607 -56552976 - MIR SINE MIR -31 231 7 1351 203 135 62 chr2 196703792 196704030 -56552553 - MLT1C LTR MaLR -8 459 240 3555 92 12 0 chr2 196704030 196704521 -56552062 - L1PA10 LINE L1 0 6168 5672 1351 203 135 62 chr2 196704521 196704705 -56551878 - MLT1C LTR MaLR -227 240 6 366 305 99 86 chr2 196704838 196705071 -56551512 + L2 LINE L2 3029 3264 -8 224 260 146 49 chr2 196705124 196705165 -56551418 - MIR SINE MIR -12 250 214 1648 243 110 15 chr2 196705165 196705639 -56550944 - LTR40a LTR ERVL 0 519 1 224 260 146 49 chr2 196705639 196705720 -56550863 - MIR SINE MIR -48 214 116 410 295 0 0 chr2 196705905 196706027 -56550556 + MIR SINE MIR 141 262 0 262 309 78 49 chr2 196706464 196706668 -56549915 - MER112 DNA MER1_type -6 254 45 31 26 0 0 chr2 196706762 196706800 -56549783 + AT_rich Low_complexity Low_complexity 1 38 0 2942 249 49 18 chr2 196807571 196808476 -56448107 + L1M4 LINE L1 4012 4944 -1202 674 183 49 0 chr2 196808541 196808683 -56447900 + L1MA10 LINE L1 6186 6334 0 268 299 20 27 chr2 196808694 196808871 -56447712 + CT-rich Low_complexity Low_complexity 1 175 0 367 282 197 0 chr2 196809632 196809774 -56446809 + MER5A DNA MER1_type 9 178 -11 6388 27 3 9 chr2 196811897 196812666 -56443917 - L1PA4 LINE L1 -3 6152 5389 5022 41 6 0 chr2 196812665 196813294 -56443289 + L1PA4 LINE L1 4752 5384 -762 * 605 271 57 53 chr2 196813410 196813657 -56442926 + MIR SINE MIR 1 248 -14 2238 75 3 26 chr2 196814023 196814330 -56442253 - AluY SINE Alu -11 300 1 22 0 0 0 chr2 196814998 196815020 -56441563 + AT_rich Low_complexity Low_complexity 1 22 0 249 256 33 33 chr2 196816078 196816168 -56440415 - MLT1I LTR MaLR -263 146 57 5320 130 21 34 chr2 196816480 196817449 -56439134 - L1PA15 LINE L1 -1 6164 5211 2630 196 21 17 chr2 196817451 196818033 -56438550 + L1PA15 LINE L1 4616 5199 -947 274 308 49 49 chr2 196820549 196820692 -56435891 - MIR SINE MIR -109 153 11 21 57 0 0 chr2 196821980 196822015 -56434568 + AT_rich Low_complexity Low_complexity 1 35 0 818 297 81 11 chr2 196822290 196822725 -56433858 + L1M4 LINE L1 3254 3718 -2428 7361 35 1 1 chr2 196823712 196824605 -56431978 - L1PA3 LINE L1 0 6155 5263 3523 174 48 32 chr2 196825295 196826023 -56430560 - L1MB5 LINE L1 -13 6161 5422 23 97 0 0 chr2 196827327 196827399 -56429184 + AT_rich Low_complexity Low_complexity 1 72 0 27 29 0 0 chr2 196827806 196827840 -56428743 + AT_rich Low_complexity Low_complexity 1 34 0 189 337 21 49 chr2 196828519 196828723 -56427860 - MIR SINE MIR -1 261 15 489 98 8 57 chr2 196829325 196829447 -56427136 + (TTCC)n Simple_repeat Simple_repeat 1 116 0 694 252 65 42 chr2 196829668 196829930 -56426653 + MER102b DNA MER1_type 43 310 -31 23 0 0 0 chr2 196830962 196830985 -56425598 + AT_rich Low_complexity Low_complexity 1 23 0 1729 174 7 3 chr2 196832011 196832299 -56424284 + AluJb SINE Alu 2 290 -22 1727 115 30 26 chr2 196833850 196834154 -56422429 + L1MA8 LINE L1 5853 6157 -134 1668 164 0 77 chr2 196835475 196835799 -56420784 + AluJb SINE Alu 1 299 -13 323 281 62 56 chr2 196836556 196836734 -56419849 - L2 LINE L2 -130 3183 3005 1128 341 99 18 chr2 196836763 196837381 -56419202 - L2 LINE L2 -414 2900 2233 187 352 66 11 chr2 196838729 196838820 -56417763 + MIR SINE MIR 90 185 -77 25 51 0 0 chr2 196839127 196839166 -56417417 + AT_rich Low_complexity Low_complexity 1 39 0 1238 84 0 0 chr2 196839514 196839681 -56416902 + L1PA8 LINE L1 6005 6171 -1 383 290 111 12 chr2 196840350 196840512 -56416071 - Charlie8 DNA MER1_type -2152 265 88 21 0 0 0 chr2 196840512 196840533 -56416050 + AT_rich Low_complexity Low_complexity 1 21 0 893 113 7 0 chr2 196840533 196840674 -56415909 - L1MA4 LINE L1 -6 6294 6153 2739 0 0 0 chr2 196841405 196841702 -56414881 + AluYa5 SINE Alu 1 297 -14 2291 211 96 38 chr2 196842035 196842674 -56413909 + MER76 LTR ERV 1 676 -12 251 290 117 68 chr2 196842859 196843021 -56413562 + MIR SINE MIR 20 189 -73 270 324 60 76 chr2 196843930 196844313 -56412270 - L2 LINE L2 -1387 1927 1551 370 169 14 0 chr2 196845278 196845349 -56411234 + MER116 DNA Mariner 5 76 -4 29 47 0 0 chr2 196845692 196845735 -56410848 + AT_rich Low_complexity Low_complexity 1 43 0 24 53 0 0 chr2 196845868 196845906 -56410677 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr2 196845994 196846016 -56410567 + AT_rich Low_complexity Low_complexity 1 22 0 7133 132 22 44 chr2 196846141 196847351 -56409232 - THE1-int LTR MaLR -149 1431 248 369 323 8 0 chr2 196847744 196847877 -56408706 - MER94 DNA DNA 0 134 1 26 50 0 0 chr2 196850098 196850138 -56406445 + AT_rich Low_complexity Low_complexity 1 40 0 26 0 0 0 chr2 196850712 196850738 -56405845 + AT_rich Low_complexity Low_complexity 1 26 0 1807 176 0 19 chr2 196850917 196851230 -56405353 - AluJb SINE Alu -5 307 1 25 0 0 0 chr2 196851886 196851911 -56404672 + AT_rich Low_complexity Low_complexity 1 25 0 308 310 125 54 chr2 196852058 196852679 -56403904 + L1ME4a LINE L1 5295 5959 -162 33 0 0 0 chr2 196854537 196854570 -56402013 + AT_rich Low_complexity Low_complexity 1 33 0 22 35 0 0 chr2 196856861 196856890 -56399693 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 196857788 196857810 -56398773 + AT_rich Low_complexity Low_complexity 1 22 0 441 0 0 0 chr2 196863955 196864004 -56392579 + (TG)n Simple_repeat Simple_repeat 2 50 0 1087 146 0 0 chr2 196864590 196864748 -56391835 + AluSp SINE Alu 132 289 -24 39 0 0 0 chr2 196864758 196864797 -56391786 + AT_rich Low_complexity Low_complexity 1 39 0 3708 177 77 56 chr2 196865266 196866340 -56390243 + L1MC3 LINE L1 5469 7765 -20 3474 134 26 82 chr2 196866568 196867915 -56388668 - pTR5 LTR ERV1 0 2468 1524 649 298 71 55 chr2 196868459 196868768 -56387815 - MLT1I LTR MaLR -10 399 86 351 293 162 18 chr2 196868863 196869030 -56387553 + MIR SINE MIR 72 262 0 21 71 0 0 chr2 196869161 196869203 -56387380 + AT_rich Low_complexity Low_complexity 1 42 0 1326 202 62 39 chr2 196870278 196870605 -56385978 - MSTA LTR MaLR -55 309 3 359 314 172 23 chr2 196870624 196870885 -56385698 - HERV16 LTR ERVL -2710 2286 1987 1712 197 19 38 chr2 196870968 196871334 -56385249 - MSTC LTR MaLR 0 428 70 2836 275 82 61 chr2 196871335 196872402 -56384181 - MLT-int LTR MaLR -407 1328 240 1125 191 27 35 chr2 196872503 196872760 -56383823 - MSTC LTR MaLR -173 255 1 636 363 70 23 chr2 196872807 196873237 -56383346 - HERV16 LTR ERVL -3171 1825 1376 5604 202 72 43 chr2 196873563 196876418 -56380165 - L1MA5 LINE L1 -4 7358 4589 348 24 0 0 chr2 196876418 196876459 -56380124 + (TG)n Simple_repeat Simple_repeat 2 42 0 5604 202 72 43 chr2 196876459 196877142 -56379441 - L1MA5 LINE L1 -2773 4589 3928 2073 67 0 4 chr2 196877142 196877412 -56379171 - AluY SINE Alu -2 309 41 1527 191 16 33 chr2 196877414 196877718 -56378865 - AluJo SINE Alu -13 299 1 5604 202 72 43 chr2 196877718 196879177 -56377406 - L1MA5 LINE L1 -3434 3928 2073 1340 168 0 137 chr2 196879177 196879535 -56377048 - AluSc SINE Alu 0 309 1 5604 202 72 43 chr2 196879535 196879958 -56376625 - L1MA5 LINE L1 -5289 2073 1664 942 332 202 24 chr2 196879943 196880620 -56375963 - L1MA5 LINE L1 -6411 798 1 * 403 275 9 9 chr2 196880749 196880858 -56375725 - HERV16 LTR ERVL -4168 828 720 2375 133 6 6 chr2 196881350 196881711 -56374872 - THE1B LTR MaLR -3 361 1 2107 191 31 5 chr2 196881733 196882147 -56374436 - MSTB LTR MaLR 0 426 2 260 333 48 0 chr2 196882397 196882502 -56374081 - HERV16 LTR ERVL -4875 121 12 594 290 81 29 chr2 196882585 196882857 -56373726 - LTR16A LTR ERVL -105 345 51 1560 239 101 43 chr2 196883022 196883609 -56372974 + MLT1E3 LTR MaLR 1 621 -3 362 316 120 8 chr2 196884173 196884306 -56372277 - MIR3 SINE MIR -30 178 31 27 29 0 0 chr2 196885460 196885494 -56371089 + AT_rich Low_complexity Low_complexity 1 34 0 21 71 0 0 chr2 196885624 196885666 -56370917 + AT_rich Low_complexity Low_complexity 1 42 0 22 70 0 0 chr2 196886201 196886244 -56370339 + AT_rich Low_complexity Low_complexity 1 43 0 275 213 0 16 chr2 196886273 196886334 -56370249 + MLT1L LTR MaLR 18 77 -538 284 352 78 26 chr2 196886460 196886653 -56369930 + MLT1J LTR MaLR 231 433 -78 3618 137 51 3 chr2 196886733 196887355 -56369228 + L1PA16 LINE L1 5512 6163 -3 544 271 31 56 chr2 196888959 196889247 -56367336 - MER34B LTR ERV1 -9 556 276 216 0 0 0 chr2 196889997 196890021 -56366562 + (T)n Simple_repeat Simple_repeat 1 24 0 4012 173 10 13 chr2 196891940 196892652 -56363931 + MER50 LTR ERV1 1 710 -24 583 139 65 0 chr2 196892767 196892875 -56363708 - MER115 DNA AcHobo -26 667 553 731 325 17 4 chr2 196892885 196893116 -56363467 - Zaphod DNA AcHobo -3605 426 193 230 292 16 0 chr2 196893122 196893194 -56363389 - MER115 DNA AcHobo -632 61 1 30 27 0 0 chr2 196893988 196894025 -56362558 + AT_rich Low_complexity Low_complexity 1 37 0 560 275 104 9 chr2 196894285 196894496 -56362087 + MIR SINE MIR 11 241 -21 373 220 212 42 chr2 196894695 196894959 -56361624 + L1ME4a LINE L1 5611 5919 -202 460 303 80 24 chr2 196895500 196895751 -56360832 + MLT1L LTR MaLR 18 282 -333 1383 162 8 13 chr2 196896056 196896291 -56360292 - AluJb SINE Alu -21 291 58 392 274 116 58 chr2 196898960 196899252 -56357331 + HAL1b LINE L1 620 928 -420 22 70 0 0 chr2 196899907 196899950 -56356633 + AT_rich Low_complexity Low_complexity 1 43 0 258 275 103 51 chr2 196899965 196900120 -56356463 + L1M4 LINE L1 2668 2814 -3332 2113 137 0 0 chr2 196900120 196900413 -56356170 + AluSx SINE Alu 1 293 -19 258 275 103 51 chr2 196900413 196900744 -56355839 + L1M4 LINE L1 2814 3179 -2967 205 227 0 83 chr2 196900772 196900904 -56355679 + A-rich Low_complexity Low_complexity 5 125 0 566 264 44 22 chr2 196900979 196901161 -56355422 - ERVL LTR ERVL -2970 2794 2609 324 291 24 31 chr2 196901200 196901327 -56355256 + ERVL LTR ERVL 496 621 -5143 2588 241 89 5 chr2 196901741 196903358 -56353225 + L1MDa LINE L1 1783 3588 -2952 2497 109 0 3 chr2 196903406 196903773 -56352810 - L1PA13 LINE L1 0 6163 5798 273 258 139 31 chr2 196903896 196904090 -56352493 - MLT1F1 LTR MaLR 0 567 353 263 231 77 55 chr2 196904156 196904247 -56352336 - MLT1E LTR MaLR -461 132 40 272 233 158 14 chr2 196904381 196904527 -56352056 - L2 LINE L2 -220 3052 2886 220 267 124 19 chr2 196904774 196904879 -56351704 + L2 LINE L2 3180 3295 -18 2016 79 79 7 chr2 196904939 196905219 -56351364 - AluSx SINE Alu -12 300 1 1032 198 11 0 chr2 196905721 196905908 -56350675 + MLT1D LTR MaLR 317 505 0 241 103 26 0 chr2 196906827 196906866 -56349717 - L1 LINE L1 -2218 3928 3889 641 194 6 63 chr2 196906966 196907103 -56349480 + L1MA4 LINE L1 6120 6246 -54 2120 112 0 3 chr2 196907103 196907398 -56349185 + AluSg SINE Alu 1 294 -16 641 194 6 63 chr2 196907398 196907435 -56349148 + L1MA4 LINE L1 6246 6284 -16 395 257 97 0 chr2 196907459 196907572 -56349011 + L2 LINE L2 1810 1933 -1381 706 297 109 10 chr2 196907610 196907903 -56348680 + L2 LINE L2 1705 2026 -1288 310 299 13 0 chr2 196907913 196907990 -56348593 - MER2 DNA MER2_type -1 344 267 951 133 6 19 chr2 196908107 196908400 -56348183 + (TTCC)n Simple_repeat Simple_repeat 1 468 0 23 54 0 0 chr2 196908483 196908520 -56348063 + AT_rich Low_complexity Low_complexity 1 37 0 201 94 0 0 chr2 196908585 196908617 -56347966 + (TA)n Simple_repeat Simple_repeat 1 32 0 22 0 0 0 chr2 196909196 196909218 -56347365 + AT_rich Low_complexity Low_complexity 1 22 0 27 49 0 0 chr2 196909424 196909465 -56347118 + AT_rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr2 196909727 196909749 -56346834 + AT_rich Low_complexity Low_complexity 1 22 0 369 296 45 75 chr2 196910984 196911183 -56345400 - MLT1I LTR MaLR -2 547 355 189 0 0 0 chr2 196911429 196911450 -56345133 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 5120 36 0 0 chr2 196911481 196912096 -56344487 - L1PA5 LINE L1 -1398 4748 4134 7424 33 5 0 chr2 196912096 196913490 -56343093 + L1PA5 LINE L1 4748 6146 -8 289 344 0 0 chr2 196913502 196913592 -56342991 + MER58 DNA MER1_type 190 279 -2141 501 227 83 26 chr2 196913702 196913859 -56342724 - MIR SINE MIR 0 262 98 660 357 96 17 chr2 196913970 196914376 -56342207 + L2 LINE L2 2875 3312 -1 2714 65 35 3 chr2 196914443 196914813 -56341770 - L1PA12 LINE L1 -15 6153 5772 231 167 0 0 chr2 196914868 196914910 -56341673 + (TA)n Simple_repeat Simple_repeat 2 43 0 237 317 87 5 chr2 196915151 196915359 -56341224 - L1ME LINE L1 -391 5730 5506 308 236 36 115 chr2 196915378 196915543 -56341040 - L1ME LINE L1 -716 5454 5303 25 51 0 0 chr2 196915558 196915597 -56340986 + AT_rich Low_complexity Low_complexity 1 39 0 23 54 0 0 chr2 196915771 196915808 -56340775 + AT_rich Low_complexity Low_complexity 1 37 0 510 292 99 6 chr2 196916321 196916482 -56340101 - MLT1I LTR MaLR -132 277 102 3914 161 28 9 chr2 196916589 196917270 -56339313 + MER50 LTR ERV1 18 711 -23 231 228 165 0 chr2 196918532 196918611 -56337972 + L2 LINE L2 3221 3312 -1 907 249 35 4 chr2 196919635 196919864 -56336719 + MIR SINE MIR 2 237 -25 282 71 0 24 chr2 196920490 196920532 -56336051 - MLT1L LTR MaLR -18 597 557 1125 91 0 45 chr2 196920599 196920775 -56335808 + Tigger5 DNA MER2_type 2057 2224 -99 273 122 24 0 chr2 196920912 196920953 -56335630 + Tigger5 DNA MER2_type 2282 2323 0 238 324 62 41 chr2 196921143 196921288 -56335295 - MIR SINE MIR -114 148 1 29 78 0 0 chr2 196921571 196921635 -56334948 + AT_rich Low_complexity Low_complexity 1 64 0 378 0 0 0 chr2 196921931 196921973 -56334610 + (TG)n Simple_repeat Simple_repeat 1 42 0 3127 36 8 0 chr2 196922735 196923120 -56333463 - L1PA5 LINE L1 -1 6153 5766 7983 41 6 0 chr2 196923121 196924495 -56332088 + L1PA5 LINE L1 4393 5771 -383 9990 205 20 11 chr2 196924496 196927797 -56328786 - L1PA16 LINE L1 -10 6156 2823 687 290 13 0 chr2 196927796 196928020 -56328563 + L1 LINE L1 2548 2774 -3372 * 935 258 19 8 chr2 196928565 196928821 -56327762 + LTR16B LTR ERVL 206 464 0 5934 93 49 12 chr2 196929442 196930528 -56326055 - L1PA13 LINE L1 -11 6152 5051 14364 196 88 19 chr2 196930530 196931829 -56324754 - L1PA13 LINE L1 -957 5840 4632 1957 114 38 3 chr2 196931829 196932118 -56324465 - AluSg SINE Alu -11 299 1 14364 196 88 19 chr2 196932118 196932261 -56324322 - L1PA13 LINE L1 -2165 4632 4500 1891 146 0 0 chr2 196932261 196932541 -56324042 - AluSx SINE Alu -18 294 15 14364 196 88 19 chr2 196932541 196935191 -56321392 - L1PA13 LINE L1 -2297 4500 1398 3294 227 46 11 chr2 196935160 196935573 -56321010 - L1PA13 LINE L1 -5804 983 535 * 1798 187 132 5 chr2 196935573 196935953 -56320630 - MSTA LTR MaLR 0 428 1 3294 227 46 11 chr2 196935953 196936236 -56320347 - L1PA13 LINE L1 -6252 535 263 1093 239 80 20 chr2 196936554 196937005 -56319578 - Charlie4a DNA MER1_type 0 508 31 23 33 0 0 chr2 196940065 196940095 -56316488 + AT_rich Low_complexity Low_complexity 1 30 0 3168 91 19 0 chr2 196940297 196940758 -56315825 - L1PA8 LINE L1 -803 5343 4874 6062 66 20 0 chr2 196940758 196941561 -56315022 + L1PA8 LINE L1 5354 6172 0 261 167 133 0 chr2 196941606 196941666 -56314917 + L1ME4a LINE L1 5567 5634 -532 1383 52 0 0 chr2 196941673 196941845 -56314738 + L1PA7 LINE L1 5982 6153 -1 192 152 0 0 chr2 196941868 196941901 -56314682 + (TATG)n Simple_repeat Simple_repeat 2 34 0 484 228 180 21 chr2 196942551 196942740 -56313843 + MIR SINE MIR 4 222 -40 322 260 165 0 chr2 196942788 196942915 -56313668 + L1ME4a LINE L1 5706 5853 -268 24 77 0 0 chr2 196943302 196943354 -56313229 + AT_rich Low_complexity Low_complexity 1 52 0 22 0 0 0 chr2 196943656 196943678 -56312905 + AT_rich Low_complexity Low_complexity 1 22 0 271 295 70 8 chr2 196945148 196945277 -56311306 + HAL1 LINE L1 132 268 -2239 1628 306 124 50 chr2 196945329 196946866 -56309717 + HAL1 LINE L1 383 2032 -475 341 309 122 24 chr2 196947002 196947248 -56309335 + HAL1 LINE L1 2236 2505 -2 595 285 98 84 chr2 196947627 196948044 -56308539 - L2 LINE L2 -377 2937 2511 2953 140 40 31 chr2 196948044 196948215 -56308368 + MER1A DNA MER1_type 1 169 -2531 2164 127 3 0 chr2 196948215 196948523 -56308060 - AluSc SINE Alu 0 309 1 2953 140 40 31 chr2 196948523 196948873 -56307710 + MER1A DNA MER1_type 169 527 0 595 285 98 84 chr2 196948873 196948932 -56307651 - L2 LINE L2 -803 2511 2454 679 301 29 22 chr2 196948938 196949214 -56307369 - L2 LINE L2 -1261 2053 1776 2467 111 17 8 chr2 196949287 196949648 -56306935 + THE1B LTR MaLR 1 364 0 5406 132 16 8 chr2 196950538 196951675 -56304908 - L1PA16 LINE L1 -2 6164 5024 5307 134 11 14 chr2 196951714 196953191 -56303392 + L1MA1 LINE L1 4349 5825 -477 6728 111 29 13 chr2 196953203 196954234 -56302349 + MER11C LTR ERVK 1 1048 -23 1098 90 13 78 chr2 196954284 196954700 -56301883 + L1MA1 LINE L1 5747 6188 -114 1901 18 0 0 chr2 196954700 196954923 -56301660 + L1PA2 LINE L1 5932 6155 0 1098 90 13 78 chr2 196954923 196955082 -56301501 + L1MA1 LINE L1 6188 6278 -24 273 57 0 0 chr2 196955082 196955117 -56301466 + (TG)n Simple_repeat Simple_repeat 2 36 0 1098 90 13 78 chr2 196955117 196955141 -56301442 + L1MA1 LINE L1 6278 6302 0 1374 195 0 0 chr2 196955172 196955444 -56301139 - L1 LINE L1 -1179 4967 4696 1784 225 79 7 chr2 196955929 196956386 -56300197 - L1MC3 LINE L1 -23 7762 7273 2464 230 47 21 chr2 196956387 196957118 -56299465 - L1MC/D LINE L1 -744 5682 4998 2260 91 0 10 chr2 196957118 196957425 -56299158 + AluY SINE Alu 1 304 -7 2464 230 47 21 chr2 196957425 196957646 -56298937 - L1MC/D LINE L1 -1428 4998 4784 1149 161 20 0 chr2 196957646 196957845 -56298738 - Tigger4(Zombi) DNA MER2_type 0 2731 2529 7046 21 0 0 chr2 196957846 196958660 -56297923 - L1PA2 LINE L1 -4 6151 5338 609 180 10 0 chr2 196958691 196958791 -56297792 - Tigger4(Zombi) DNA MER2_type -2630 101 1 300 200 0 0 chr2 196958743 196958798 -56297785 + MER46A DNA MER2_type 97 151 -85 * 2515 249 57 28 chr2 196958798 196959744 -56296839 - L1MC/D LINE L1 -1648 4778 3805 228 194 14 14 chr2 196959806 196959878 -56296705 + (TA)n Simple_repeat Simple_repeat 1 72 0 876 213 20 59 chr2 196959909 196960226 -56296357 - L1MCa LINE L1 -4503 1923 1528 21 0 0 0 chr2 196960638 196960659 -56295924 + AT_rich Low_complexity Low_complexity 1 21 0 1964 127 7 0 chr2 196960659 196960951 -56295632 - AluSc SINE Alu -15 294 1 535 308 66 28 chr2 196963505 196963827 -56292756 + LTR16B LTR ERVL 33 438 -26 391 310 35 17 chr2 196963914 196964088 -56292495 + MIR SINE MIR 29 205 -57 193 400 0 55 chr2 196964568 196964713 -56291870 - L2 LINE L2 -222 3050 2914 22 35 0 0 chr2 196965693 196965722 -56290861 + AT_rich Low_complexity Low_complexity 1 29 0 613 199 47 2 chr2 196966190 196966356 -56290227 + L1MA10 LINE L1 5346 5467 -701 330 198 0 0 chr2 196966425 196966483 -56290100 + Alu SINE Alu 3 52 -251 4355 164 31 16 chr2 196966514 196967355 -56289228 + L1MA10 LINE L1 5478 6331 -3 24 100 0 0 chr2 196968497 196968577 -56288006 + AT_rich Low_complexity Low_complexity 1 80 0 180 0 0 0 chr2 196968980 196969000 -56287583 + (GA)n Simple_repeat Simple_repeat 2 21 0 27 29 0 0 chr2 196969802 196969836 -56286747 + AT_rich Low_complexity Low_complexity 1 34 0 222 335 23 23 chr2 196970591 196970767 -56285816 + (CATATA)n Simple_repeat Simple_repeat 5 180 0 216 0 0 0 chr2 196970786 196970810 -56285773 + (CA)n Simple_repeat Simple_repeat 2 25 0 539 134 0 10 chr2 196972224 196972321 -56284262 + (TTCC)n Simple_repeat Simple_repeat 4 99 0 213 319 69 35 chr2 196972530 196972674 -56283909 - L2 LINE L2 -4 3309 3161 218 324 0 14 chr2 196973221 196973292 -56283291 - L2 LINE L2 -210 3062 2993 2193 78 3 10 chr2 196973456 196973752 -56282831 - AluSc SINE Alu -15 294 1 21 0 0 0 chr2 196974032 196974053 -56282530 + AT_rich Low_complexity Low_complexity 1 21 0 1991 116 11 0 chr2 196974063 196974367 -56282216 + AluSg SINE Alu 3 309 0 206 273 0 18 chr2 196975022 196975077 -56281506 + L2 LINE L2 3216 3269 -3 259 292 66 34 chr2 196975615 196975824 -56280759 - L1MC/D LINE L1 -659 5511 5304 1645 146 205 3 chr2 196975888 196976244 -56280339 - MSTA LTR MaLR 0 428 1 305 239 46 85 chr2 196978016 196978146 -56278437 - MIR3 SINE MIR -81 127 3 448 302 37 60 chr2 196978259 196978474 -56278109 + MIR SINE MIR 53 262 0 377 306 114 41 chr2 196979325 196979544 -56277039 + MIR SINE MIR 28 262 0 1169 219 37 0 chr2 196980737 196980979 -56275604 - L1PA16 LINE L1 -43 6123 5873 28 0 0 0 chr2 196981004 196981032 -56275551 + AT_rich Low_complexity Low_complexity 1 28 0 373 278 75 12 chr2 196981039 196981294 -56275289 + L1M4 LINE L1 3035 3305 -2841 * 786 290 51 49 chr2 196981281 196981792 -56274791 + L1M4 LINE L1 3604 4115 -2031 435 338 32 14 chr2 196982591 196982810 -56273773 + HsTC2 DNA Tc2 640 862 -1036 822 259 102 57 chr2 196982905 196983165 -56273418 + LTR16B LTR ERVL 1 291 -173 6678 61 15 23 chr2 196983165 196984425 -56272158 - L1PA7 LINE L1 -15 6139 4888 822 259 102 57 chr2 196984425 196984604 -56271979 + LTR16B LTR ERVL 291 460 -4 4208 52 9 6 chr2 196985631 196986172 -56270411 + L1PA7 LINE L1 5609 6151 -3 280 267 25 58 chr2 196986199 196986319 -56270264 - MLT1H LTR MaLR -375 174 59 28 79 0 0 chr2 196986534 196986597 -56269986 + AT_rich Low_complexity Low_complexity 1 63 0 372 295 55 28 chr2 196986727 196986981 -56269602 + L1MEd LINE L1 997 1257 -4862 1120 162 27 18 chr2 196987131 196987353 -56269230 + L1PA16 LINE L1 5942 6165 -1 451 150 0 53 chr2 196989336 196989449 -56267134 - AluJb SINE Alu -4 308 202 27 29 0 0 chr2 196991248 196991282 -56265301 + AT_rich Low_complexity Low_complexity 1 34 0 30 0 0 0 chr2 196991501 196991531 -56265052 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr2 196992120 196992142 -56264441 + AT_rich Low_complexity Low_complexity 1 22 0 1415 182 36 86 chr2 196992275 196992659 -56263924 + MLT1A1 LTR MaLR 1 365 0 2542 204 31 5 chr2 196993025 196993614 -56262969 - L1MB8 LINE L1 0 6178 5575 24 67 0 0 chr2 196994250 196994295 -56262288 + AT_rich Low_complexity Low_complexity 1 45 0 21 0 0 0 chr2 196994821 196994842 -56261741 + AT_rich Low_complexity Low_complexity 1 21 0 295 326 14 0 chr2 196995272 196995410 -56261173 - L1MC4a LINE L1 -1882 5926 5787 2214 108 0 0 chr2 196995419 196995726 -56260857 + AluSg SINE Alu 1 307 -3 715 310 110 21 chr2 196995807 196996233 -56260350 - L1MC4a LINE L1 -2048 5760 5297 22 56 0 0 chr2 196997094 196997130 -56259453 + AT_rich Low_complexity Low_complexity 1 36 0 9107 212 31 36 chr2 196997136 196999722 -56256861 - L1P4 LINE L1 -683 6133 3564 1208 303 3 9 chr2 196999720 197000037 -56256546 - L1P4 LINE L1 -6472 315 1 * 616 306 74 44 chr2 197000053 197000458 -56256125 + L1MCc LINE L1 92 508 -5915 1472 283 65 65 chr2 197000683 197001369 -56255214 + L1MCc LINE L1 822 1507 -5615 2170 106 3 0 chr2 197001369 197001675 -56254908 - AluSp SINE Alu 0 307 1 1472 283 65 65 chr2 197001675 197002175 -56254408 + L1MCc LINE L1 1507 2006 -5116 395 92 15 0 chr2 197002175 197002240 -56254343 + (TA)n Simple_repeat Simple_repeat 2 67 0 1472 283 65 65 chr2 197002240 197002588 -56253995 + L1MCc LINE L1 2006 2560 -4562 24 67 0 0 chr2 197003819 197003864 -56252719 + AT_rich Low_complexity Low_complexity 1 45 0 648 234 62 26 chr2 197004906 197005098 -56251485 + MIR SINE MIR 2 200 -62 184 273 109 0 chr2 197006193 197006248 -56250335 + L2 LINE L2 1387 1447 -1867 180 361 66 24 chr2 197007694 197007860 -56248723 + L2 LINE L2 2637 2809 -505 7183 46 0 0 chr2 197010284 197011255 -56245328 - L1PA5 LINE L1 -5 6149 5176 198 103 0 0 chr2 197011256 197011285 -56245298 + (T)n Simple_repeat Simple_repeat 1 29 0 1681 114 70 0 chr2 197011305 197011576 -56245007 - L1PA10 LINE L1 -11 6157 5868 2831 58 29 0 chr2 197011576 197011952 -56244631 - L1P LINE L1 -963 5183 4797 21 0 0 0 chr2 197012458 197012479 -56244104 + AT_rich Low_complexity Low_complexity 1 21 0 310 347 77 61 chr2 197012968 197013164 -56243419 - L2 LINE L2 -171 3101 2903 433 344 13 0 chr2 197013413 197013570 -56243013 + HERVL LTR ERVL 2075 2233 -3421 692 374 50 24 chr2 197013836 197014462 -56242121 + HERVL LTR ERVL 2543 3202 -1938 2096 203 57 24 chr2 197014520 197015169 -56241414 + L1MDa LINE L1 2073 2745 -3795 1592 209 48 0 chr2 197015169 197015500 -56241083 + MER7A DNA MER2_type 2 346 0 2096 203 57 24 chr2 197015500 197015550 -56241033 + L1MDa LINE L1 2745 2792 -3748 1773 182 39 9 chr2 197015553 197015888 -56240695 - MER2 DNA MER2_type 0 345 1 2569 250 55 16 chr2 197015889 197015995 -56240588 + L1MDa LINE L1 2795 2895 -3645 252 0 0 0 chr2 197015995 197016023 -56240560 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 2569 250 55 16 chr2 197016023 197016836 -56239747 + L1MDa LINE L1 2895 3750 -2790 425 219 164 0 chr2 197016847 197016993 -56239590 + L1MD1 LINE L1 6069 6238 -4 2106 99 7 3 chr2 197017003 197017297 -56239286 - AluSq SINE Alu -15 298 4 1189 205 62 4 chr2 197017441 197017685 -56238898 - AluJo SINE Alu -52 260 3 1339 182 58 16 chr2 197017796 197018104 -56238479 - L1MB8 LINE L1 -12 6166 5846 1148 242 94 55 chr2 197018122 197018560 -56238023 + MLT1D LTR MaLR 24 478 -27 989 223 21 90 chr2 197018570 197018946 -56237637 - L1M4 LINE L1 -3114 3032 2683 2251 59 10 0 chr2 197019200 197019488 -56237095 + AluY SINE Alu 1 291 -20 22 35 0 0 chr2 197019911 197019940 -56236643 + AT_rich Low_complexity Low_complexity 1 29 0 1979 114 0 31 chr2 197021173 197021463 -56235120 - AluSx SINE Alu -5 307 27 33 0 0 0 chr2 197021849 197021882 -56234701 + AT_rich Low_complexity Low_complexity 1 33 0 2272 68 0 0 chr2 197021895 197022176 -56234407 - AluY SINE Alu -30 281 1 211 268 0 18 chr2 197022699 197022755 -56233828 - L2 LINE L2 -2102 1212 1158 227 335 77 16 chr2 197022953 197023147 -56233436 + L3 LINE CR1 818 1023 -554 196 328 102 31 chr2 197023685 197023813 -56232770 + L2 LINE L2 3177 3313 0 233 350 21 31 chr2 197023921 197024018 -56232565 + L3 LINE CR1 1447 1542 -35 271 250 15 0 chr2 197024074 197024142 -56232441 - MIR SINE MIR -9 253 185 22 0 0 0 chr2 197025251 197025273 -56231310 + AT_rich Low_complexity Low_complexity 1 22 0 2136 78 7 14 chr2 197025633 197025958 -56230625 - AluSp SINE Alu 0 323 1 394 65 0 104 chr2 197027196 197027273 -56229310 - L1PA11 LINE L1 0 6174 6106 515 108 0 9 chr2 197027274 197027378 -56229205 + L1PA11 LINE L1 5981 6080 -88 243 0 0 0 chr2 197029862 197029889 -56226694 + (TG)n Simple_repeat Simple_repeat 2 28 0 196 348 6 105 chr2 197030338 197030519 -56226064 + MIR3 SINE MIR 40 202 -6 255 194 20 33 chr2 197031393 197031484 -56225099 - L1MC4 LINE L1 -1339 6983 2006 248 235 59 0 chr2 197031496 197031581 -56225002 - L1MC4 LINE L1 -1339 6703 6614 232 173 0 0 chr2 197031607 197031659 -56224924 - L1MC4 LINE L1 -1339 6703 6652 616 251 148 15 chr2 197033629 197034027 -56222556 + L1M4 LINE L1 2461 2911 -3235 340 230 23 0 chr2 197034056 197034143 -56222440 - MLT1G LTR MaLR -5 585 497 556 277 95 18 chr2 197034300 197034574 -56222009 - L1M4 LINE L1 -1750 4396 4102 534 165 0 26 chr2 197034576 197034691 -56221892 + LTR41 LTR ERVL 1 112 -661 2378 84 3 0 chr2 197034737 197035036 -56221547 + AluSp SINE Alu 1 300 -13 693 255 32 25 chr2 197035049 197035327 -56221256 + L1M4 LINE L1 4445 4724 -1422 779 270 108 18 chr2 197035333 197035785 -56220798 + L1M4 LINE L1 4885 5377 -769 24 67 0 0 chr2 197036129 197036174 -56220409 + AT_rich Low_complexity Low_complexity 1 45 0 1962 113 3 7 chr2 197036385 197036712 -56219871 + AluSg SINE Alu 1 326 0 195 42 0 0 chr2 197036784 197036808 -56219775 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1991 109 0 7 chr2 197036838 197037170 -56219413 - AluSx SINE Alu 0 340 11 26 0 0 0 chr2 197037604 197037630 -56218953 + AT_rich Low_complexity Low_complexity 1 26 0 217 269 0 0 chr2 197039180 197039232 -56217351 + (TTTA)n Simple_repeat Simple_repeat 1 52 0 266 232 18 0 chr2 197039317 197039373 -56217210 + L2 LINE L2 3251 3307 -6 385 330 96 0 chr2 197039420 197039535 -56217048 + L2 LINE L2 3147 3272 0 573 300 86 26 chr2 197039791 197040024 -56216559 + MIR SINE MIR 5 251 -11 198 265 0 0 chr2 197040859 197040927 -56215656 + (TA)n Simple_repeat Simple_repeat 1 68 0 401 290 14 10 chr2 197041036 197041175 -56215408 + L1MC5 LINE L1 6698 6883 -1112 293 299 59 54 chr2 197041233 197041437 -56215146 + L1MC5 LINE L1 7030 7234 -727 409 262 175 35 chr2 197041518 197042118 -56214465 + L1MC5 LINE L1 7224 7907 -54 2669 39 0 3 chr2 197042403 197042714 -56213869 + AluY SINE Alu 2 311 0 531 82 0 0 chr2 197043129 197043202 -56213381 + (TGGA)n Simple_repeat Simple_repeat 4 76 0 194 0 39 0 chr2 197043210 197043236 -56213347 + (TAGA)n Simple_repeat Simple_repeat 3 29 0 265 128 73 12 chr2 197043599 197043763 -56212820 + (TA)n Simple_repeat Simple_repeat 2 175 0 2437 104 90 12 chr2 197043785 197044197 -56212386 + MLT2A1 LTR ERVL 1 444 0 12512 84 2 4 chr2 197044197 197045844 -56210739 + HERVL-A1 LTR ERVL 1 1644 -4010 5421 68 21 10 chr2 197045844 197046559 -56210024 + HERVL-A1 LTR ERVL 4930 5652 -2 2680 104 59 7 chr2 197046561 197046983 -56209600 + MLT2A1 LTR ERVL 1 444 0 219 283 0 0 chr2 197047014 197047067 -56209516 + (TA)n Simple_repeat Simple_repeat 2 54 0 22 35 0 0 chr2 197047071 197047100 -56209483 + AT_rich Low_complexity Low_complexity 1 29 0 893 246 38 108 chr2 197047200 197047299 -56209284 + L1MC5 LINE L1 6614 6718 -1243 1495 287 102 25 chr2 197047299 197047795 -56208788 + MLT1E LTR MaLR 2 545 -48 252 0 0 0 chr2 197047795 197047823 -56208760 + (TG)n Simple_repeat Simple_repeat 2 29 0 1495 287 102 25 chr2 197047823 197047876 -56208707 + MLT1E LTR MaLR 545 593 0 893 246 38 108 chr2 197047876 197048435 -56208148 + L1MC5 LINE L1 6718 7226 -735 627 146 32 8 chr2 197048660 197048783 -56207800 - L1MC4 LINE L1 -1 8041 7916 1538 175 4 0 chr2 197048836 197049093 -56207490 - Tigger3(Golem) DNA MER2_type 0 3038 2781 694 235 44 0 chr2 197049090 197049226 -56207357 - Tigger3(Golem) DNA MER2_type -2887 142 1 * 1139 207 89 26 chr2 197049258 197049606 -56206977 - L1MC4 LINE L1 -124 7918 7549 690 235 121 53 chr2 197049650 197049711 -56206872 + L1MC5 LINE L1 7339 7394 -567 981 200 147 34 chr2 197049711 197049976 -56206607 + AluJo SINE Alu 2 296 -6 690 235 121 53 chr2 197049976 197050441 -56206142 + L1MC5 LINE L1 7394 7901 -60 829 188 25 0 chr2 197050483 197050643 -56205940 + L1MC1 LINE L1 5996 6159 -174 1638 84 34 0 chr2 197050643 197050875 -56205708 + L1PA10 LINE L1 5921 6166 -2 1012 118 29 35 chr2 197050908 197051078 -56205505 + L1MC1 LINE L1 6165 6333 0 510 332 90 24 chr2 197051094 197051428 -56205155 + ERVL LTR ERVL 3371 3726 -2038 338 339 103 36 chr2 197051764 197052094 -56204489 + ERVL LTR ERVL 4123 4474 -1180 283 374 78 10 chr2 197052119 197052413 -56204170 + ERVL LTR ERVL 4588 4901 -863 1995 97 4 0 chr2 197052498 197052766 -56203817 + AluSc SINE Alu 41 309 0 495 280 9 0 chr2 197053565 197053672 -56202911 + LTR67 LTR ERVL 109 216 -341 45 45 0 0 chr2 197056702 197056768 -56199815 + AT_rich Low_complexity Low_complexity 1 66 0 261 0 0 0 chr2 197057199 197057228 -56199355 + (TTTTA)n Simple_repeat Simple_repeat 3 31 0 1303 211 14 18 chr2 197057241 197057525 -56199058 - AluJb SINE Alu -26 286 4 2359 201 34 4 chr2 197058538 197059040 -56197543 + L1MB5 LINE L1 5658 6174 0 21 36 0 0 chr2 197059125 197059153 -56197430 + AT_rich Low_complexity Low_complexity 1 28 0 216 0 0 0 chr2 197059824 197059848 -56196735 + (TA)n Simple_repeat Simple_repeat 2 25 0 39 50 0 0 chr2 197059861 197059921 -56196662 + AT_rich Low_complexity Low_complexity 1 60 0 226 212 0 61 chr2 197061471 197061537 -56195046 + HAL1 LINE L1 2256 2317 -190 2415 121 59 5 chr2 197061788 197062210 -56194373 - LTR56 LTR ERV1 0 445 1 296 152 91 0 chr2 197063398 197063464 -56193119 - L1ME LINE L1 -692 5478 5407 1158 207 91 112 chr2 197063713 197063868 -56192715 - L1ME LINE L1 -918 5228 5071 2013 73 0 8 chr2 197063868 197064128 -56192455 - AluY SINE Alu -17 294 37 1158 207 91 112 chr2 197064128 197064696 -56191887 - L1ME LINE L1 -1075 5071 4520 * 1180 278 51 14 chr2 197064688 197065123 -56191460 - L1ME LINE L1 -1840 4306 3856 186 276 52 0 chr2 197065142 197065200 -56191383 - MIR SINE MIR -81 181 121 215 103 26 0 chr2 197066077 197066116 -56190467 + (TA)n Simple_repeat Simple_repeat 2 41 0 25 65 0 0 chr2 197067168 197067214 -56189369 + AT_rich Low_complexity Low_complexity 1 46 0 7816 14 0 0 chr2 197067242 197068167 -56188416 - L1PA2 LINE L1 -2 6153 5230 16833 32 1 1 chr2 197068168 197070227 -56186356 + L1P LINE L1 1755 3813 -2333 1059 270 69 18 chr2 197070530 197071081 -56185502 + L1M4 LINE L1 2635 3213 -2933 500 239 139 28 chr2 197071397 197071577 -56185006 + MER3 DNA MER1_type 10 209 0 10907 102 7 34 chr2 197071663 197073285 -56183298 + THE1B-int LTR MaLR 2 1580 0 2201 132 31 14 chr2 197073285 197073641 -56182942 + THE1B LTR MaLR 1 362 -2 552 250 153 67 chr2 197073808 197074016 -56182567 + L1M4 LINE L1 4415 4604 -1542 680 214 109 57 chr2 197074016 197074226 -56182357 + MER58A DNA MER1_type 1 221 -3 552 250 153 67 chr2 197074226 197074651 -56181932 + L1M4 LINE L1 4604 5115 -1031 2257 126 3 0 chr2 197074651 197074961 -56181622 + AluSp SINE Alu 3 313 0 552 250 153 67 chr2 197074961 197075018 -56181565 + L1M4 LINE L1 5115 5166 -980 1629 294 42 6 chr2 197075150 197075677 -56180906 + L1MCb LINE L1 1 546 -5499 1757 229 41 51 chr2 197075870 197076305 -56180278 + L1MCb LINE L1 617 1072 -5072 2105 188 31 2 chr2 197076305 197076721 -56179862 + MSTA LTR MaLR 1 428 0 1757 229 41 51 chr2 197076721 197076942 -56179641 + L1MCb LINE L1 1072 1294 -4850 1748 222 52 4 chr2 197076938 197077397 -56179186 + L1MCb LINE L1 2863 3343 -3221 * 2459 258 50 36 chr2 197077406 197078182 -56178401 + L1M2a LINE L1 3 789 -6379 354 64 21 0 chr2 197078294 197078341 -56178242 + MLT1B LTR MaLR 338 385 -5 466 321 38 16 chr2 197079269 197079453 -56177130 - MIR SINE MIR -70 192 5 4848 100 140 74 chr2 197079689 197081010 -56175573 - pTR5 LTR ERV1 -1 2437 589 23 0 0 0 chr2 197081235 197081258 -56175325 + AT_rich Low_complexity Low_complexity 1 23 0 4235 228 61 5 chr2 197082420 197083760 -56172823 - L1MC1 LINE L1 -87 6246 4833 3982 178 27 27 chr2 197084056 197085404 -56171179 + L1MA4 LINE L1 4730 6076 -224 5839 253 44 54 chr2 197085515 197089116 -56167467 + L1MA8 LINE L1 406 4043 -3124 1663 192 22 49 chr2 197089116 197089523 -56167060 - MSTD LTR MaLR 0 396 1 5839 253 44 54 chr2 197089523 197089873 -56166710 + L1MA8 LINE L1 4043 4021 -3146 2002 158 0 3 chr2 197089873 197090184 -56166399 + AluSx SINE Alu 1 310 -2 5839 253 44 54 chr2 197090184 197090224 -56166359 + L1MA8 LINE L1 4020 4059 -3108 10845 102 7 5 chr2 197090228 197091705 -56164878 + L1P3 LINE L1 1 1484 -4977 3648 88 8 4 chr2 197091705 197092204 -56164379 + L1PA7 LINE L1 5654 6154 0 10845 102 7 5 chr2 197092204 197092227 -56164356 + L1P3 LINE L1 1484 1505 -4956 330 286 0 23 chr2 197092302 197092435 -56164148 - L1M LINE L1 -2424 5384 5255 1746 143 8 0 chr2 197092437 197092689 -56163894 + AluSx SINE Alu 1 254 -58 8413 218 35 15 chr2 197092894 197094049 -56162534 + L1MA8 LINE L1 4079 5210 -2111 315 0 0 0 chr2 197094049 197094084 -56162499 + (CA)n Simple_repeat Simple_repeat 2 36 0 8413 218 35 15 chr2 197094084 197095286 -56161297 + L1MA8 LINE L1 5210 6602 -719 2997 173 27 8 chr2 197095291 197095927 -56160656 + L1MA8 LINE L1 6663 7310 -2 4141 217 34 14 chr2 197095969 197097020 -56159563 + L1MA9 LINE L1 5203 6274 -38 252 0 0 0 chr2 197097023 197097051 -56159532 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 2374 49 14 0 chr2 197097053 197097341 -56159242 - AluY SINE Alu -19 292 1 25 51 0 0 chr2 197097346 197097385 -56159198 + AT_rich Low_complexity Low_complexity 1 39 0 1514 272 131 30 chr2 197097385 197098194 -56158389 + L1ME3A LINE L1 5272 6162 -8 2606 116 14 10 chr2 197098345 197098758 -56157825 + L1MA6 LINE L1 5886 6300 0 23 33 0 0 chr2 197099302 197099332 -56157251 + AT_rich Low_complexity Low_complexity 1 30 0 404 278 69 35 chr2 197099885 197100058 -56156525 + MIR SINE MIR 2 180 -82 391 305 53 63 chr2 197101865 197102183 -56154400 + L2 LINE L2 2999 3313 0 263 331 31 0 chr2 197103798 197103911 -56152672 - MIR3 SINE MIR -41 167 51 433 246 88 139 chr2 197104520 197105068 -56151515 - MLT1H LTR MaLR -5 550 31 217 433 21 0 chr2 197105931 197106072 -56150511 - L2 LINE L2 -261 3011 2868 306 303 53 0 chr2 197106108 197106240 -56150343 + MER102b DNA MER1_type 35 173 -168 186 167 0 0 chr2 197106321 197106355 -56150228 + (TA)n Simple_repeat Simple_repeat 1 37 -11 2501 107 85 17 chr2 197106355 197106767 -56149816 - MLT2A1 LTR ERVL 0 444 5 186 167 0 0 chr2 197106767 197106780 -56149803 + (TA)n Simple_repeat Simple_repeat 36 48 0 25 0 0 0 chr2 197106791 197106816 -56149767 + AT_rich Low_complexity Low_complexity 1 25 0 2133 176 20 0 chr2 197106831 197107188 -56149395 - THE1B LTR MaLR 0 364 1 652 267 91 9 chr2 197107310 197107520 -56149063 - MLT1J2 LTR MaLR -223 227 1 383 294 28 39 chr2 197107520 197107659 -56148924 + MER102b DNA MER1_type 202 338 -3 274 281 62 10 chr2 197108265 197108361 -56148222 - MIR3 SINE MIR -17 191 91 23 0 0 0 chr2 197109978 197110001 -56146582 + AT_rich Low_complexity Low_complexity 1 23 0 6450 220 37 8 chr2 197110003 197111840 -56144743 + L1MB8 LINE L1 3601 5489 -685 26228 146 12 17 chr2 197111840 197118251 -56138332 + L1PA8A LINE L1 4 6487 0 2764 199 30 16 chr2 197118260 197118953 -56137630 + L1MB8 LINE L1 5476 6178 0 308 342 32 6 chr2 197118954 197119112 -56137471 - L1MCc LINE L1 -5133 1290 1129 377 269 101 73 chr2 197119534 197119931 -56136652 - L1MCc LINE L1 -5998 425 18 401 239 60 87 chr2 197120733 197120917 -56135666 - MIR SINE MIR 0 262 84 29 47 0 0 chr2 197123616 197123659 -56132924 + AT_rich Low_complexity Low_complexity 1 43 0 189 171 0 0 chr2 197123774 197123809 -56132774 + (TA)n Simple_repeat Simple_repeat 2 36 0 29 0 0 0 chr2 197123855 197123884 -56132699 + AT_rich Low_complexity Low_complexity 1 29 0 227 137 0 8 chr2 197124172 197124401 -56132182 + AluSx SINE Alu 1 302 0 25 51 0 0 chr2 197124401 197124440 -56132143 + AT_rich Low_complexity Low_complexity 1 39 0 534 250 96 32 chr2 197126027 197126215 -56130368 - MIR SINE MIR -57 205 6 394 339 9 0 chr2 197126786 197126898 -56129685 + MIR3 SINE MIR 87 199 -9 22 35 0 0 chr2 197126968 197126997 -56129586 + AT_rich Low_complexity Low_complexity 1 29 0 316 317 25 0 chr2 197127456 197127576 -56129007 - L3b LINE CR1 -212 1371 1249 210 282 94 51 chr2 197127894 197128011 -56128572 - MIR SINE MIR -140 122 1 378 310 90 13 chr2 197128097 197128252 -56128331 + Charlie8 DNA MER1_type 99 265 -2152 691 344 83 21 chr2 197129194 197129816 -56126767 - L2 LINE L2 0 3272 2612 1642 259 83 23 chr2 197129821 197130349 -56126234 - MLT1E LTR MaLR 0 593 34 235 348 94 56 chr2 197130365 197130465 -56126118 - L2 LINE L2 -711 2603 2508 1811 179 12 50 chr2 197130465 197130868 -56125715 + MLT1B LTR MaLR 3 390 0 235 348 94 56 chr2 197130868 197131000 -56125583 - L2 LINE L2 -806 2508 2362 330 268 80 0 chr2 197131004 197131116 -56125467 - L2 LINE L2 -1 3312 3192 251 150 0 0 chr2 197131166 197131206 -56125377 - MLT2C2 LTR ERVL 0 464 425 493 41 14 14 chr2 197131206 197131279 -56125304 + (TAGA)n Simple_repeat Simple_repeat 2 74 0 301 324 41 99 chr2 197131286 197131745 -56124838 - L2 LINE L2 -1285 2029 1545 577 276 176 9 chr2 197131745 197131966 -56124617 + MIR SINE MIR 2 259 -3 301 324 41 99 chr2 197131966 197132392 -56124191 - L2 LINE L2 -1769 1545 988 26 64 0 0 chr2 197133559 197133606 -56122977 + AT_rich Low_complexity Low_complexity 1 47 0 296 283 94 24 chr2 197133720 197133897 -56122686 + MIR3 SINE MIR 8 199 -9 22 70 0 0 chr2 197135009 197135052 -56121531 + AT_rich Low_complexity Low_complexity 1 43 0 2041 86 41 0 chr2 197135373 197135642 -56120941 + AluSx SINE Alu 24 303 -9 234 91 0 0 chr2 197135941 197135974 -56120609 + (TC)n Simple_repeat Simple_repeat 2 34 0 1869 139 0 28 chr2 197136812 197137099 -56119484 + AluSx SINE Alu 1 279 -33 345 47 0 0 chr2 197137102 197137145 -56119438 + (GAAAA)n Simple_repeat Simple_repeat 2 44 0 300 315 50 45 chr2 197137234 197137418 -56119165 - MIR SINE MIR -72 190 9 417 263 11 17 chr2 197138303 197138494 -56118089 - L1MEd LINE L1 -3821 2561 2372 575 293 87 54 chr2 197139138 197139411 -56117172 - L1MEd LINE L1 -4877 1495 1198 1473 96 5 0 chr2 197139411 197139609 -56116974 + AluY SINE Alu 98 296 -15 575 293 87 54 chr2 197139609 197139817 -56116766 - L1MEd LINE L1 -5174 1198 998 237 272 29 48 chr2 197140313 197140416 -56116167 - L1MEd LINE L1 -5968 404 304 3265 128 80 52 chr2 197140671 197141377 -56115206 + pTR5 LTR ERV1 1174 2032 -406 230 241 17 0 chr2 197141379 197141437 -56115146 + LTR30 LTR ERV1 553 611 -111 3372 107 133 141 chr2 197141655 197142802 -56113781 + pTR5 LTR ERV1 1173 2438 0 197 333 0 0 chr2 197144763 197144823 -56111760 + MIR3 SINE MIR 138 197 -11 184 180 0 33 chr2 197146487 197146548 -56110035 + GA-rich Low_complexity Low_complexity 2 60 0 29 0 0 0 chr2 197147776 197147805 -56108778 + AT_rich Low_complexity Low_complexity 1 29 0 350 367 70 13 chr2 197149003 197149232 -56107351 - L3b LINE CR1 -240 1343 1102 259 319 105 19 chr2 197150097 197150354 -56106229 - MLT1J LTR MaLR 0 511 233 339 271 36 66 chr2 197150506 197150672 -56105911 - MLT1L LTR MaLR -448 167 7 276 240 0 40 chr2 197151162 197151237 -56105346 + MIR SINE MIR 131 202 -60 554 281 100 6 chr2 197151735 197151981 -56104602 + L2 LINE L2 2679 2955 -317 230 300 36 80 chr2 197152164 197152527 -56104056 - HAL1 LINE L1 -1336 1171 825 28 48 0 0 chr2 197153777 197153819 -56102764 + AT_rich Low_complexity Low_complexity 1 42 0 203 254 28 42 chr2 197153983 197154054 -56102529 + L3b LINE CR1 1426 1495 -88 189 171 0 0 chr2 197154684 197154719 -56101864 + (CATATA)n Simple_repeat Simple_repeat 2 36 0 854 308 21 0 chr2 197154848 197155088 -56101495 - MIR SINE MIR -3 259 15 795 174 0 7 chr2 197155299 197155438 -56101145 + MLT1A1 LTR MaLR 1 138 -227 2522 154 52 20 chr2 197155438 197155936 -56100647 - MLT2A1 LTR ERVL 0 520 1 42428 80 10 7 chr2 197155936 197161533 -56095050 - HERVL-A1-A1 LTR ERVL 0 5654 40 3035 92 0 0 chr2 197161533 197161933 -56094650 - MLT2A1 LTR ERVL -44 400 1 1332 194 4 0 chr2 197161933 197162164 -56094419 + MLT1A1 LTR MaLR 134 365 0 243 310 0 0 chr2 197162278 197162336 -56094247 + L2 LINE L2 3205 3262 -10 387 237 82 30 chr2 197162502 197162637 -56093946 - MIR3 SINE MIR -11 197 56 353 247 114 25 chr2 197163389 197163547 -56093036 + MLT1L LTR MaLR 165 336 -279 790 192 108 12 chr2 197163609 197163776 -56092807 - MER20 DNA MER1_type -33 186 4 332 234 47 0 chr2 197164256 197164363 -56092220 + L2 LINE L2 1260 1371 -1943 6149 204 19 14 chr2 197164399 197166053 -56090530 + L1M1 LINE L1 3305 4973 -2592 707 302 94 50 chr2 197166369 197166801 -56089782 - L1M4 LINE L1 -1742 4404 3939 2592 32 3 10 chr2 197166801 197167110 -56089473 + AluY SINE Alu 1 307 -4 707 302 94 50 chr2 197167110 197167254 -56089329 - L1M4 LINE L1 -2207 3939 3803 266 332 123 11 chr2 197167400 197167587 -56088996 + MIR SINE MIR 49 256 -6 22 35 0 0 chr2 197168167 197168196 -56088387 + AT_rich Low_complexity Low_complexity 1 29 0 308 304 98 9 chr2 197168303 197168415 -56088168 - L2 LINE L2 -3 3269 3148 671 320 106 65 chr2 197169745 197170018 -56086565 + L2 LINE L2 1955 2215 -1098 1808 144 40 40 chr2 197170018 197170393 -56086190 - THE1C LTR MaLR 0 375 1 671 320 106 65 chr2 197170393 197171411 -56085172 + L2 LINE L2 2215 3308 -5 1591 179 21 14 chr2 197171467 197171757 -56084826 + AluJb SINE Alu 3 294 -18 22 56 0 0 chr2 197172025 197172061 -56084522 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr2 197172679 197172700 -56083883 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr2 197173149 197173175 -56083408 + AT_rich Low_complexity Low_complexity 1 26 0 2167 154 2 22 chr2 197174080 197174342 -56082241 - L1M2 LINE L1 -647 5848 5598 1816 179 14 11 chr2 197174342 197174705 -56081878 - THE1B LTR MaLR 0 364 1 2167 154 2 22 chr2 197174705 197174969 -56081614 - L1M2 LINE L1 -897 5598 5330 7536 242 56 61 chr2 197174970 197175379 -56081204 - L1M2 LINE L1 -1633 4717 4307 1671 192 10 0 chr2 197175379 197175686 -56080897 + AluJb SINE Alu 1 310 -2 7536 242 56 61 chr2 197175686 197176107 -56080476 - L1M2 LINE L1 -2043 4307 3885 1376 153 227 14 chr2 197176107 197176460 -56080123 + MSTA LTR MaLR 1 428 0 7536 242 56 61 chr2 197176460 197176628 -56079955 - L1M2 LINE L1 -2465 3885 3718 5868 29 0 0 chr2 197176628 197177316 -56079267 + L1PA4 LINE L1 5468 6155 0 7536 242 56 61 chr2 197177316 197180945 -56075638 - L1M2 LINE L1 -2632 3718 457 1207 294 54 35 chr2 197181060 197181334 -56075249 + MLT1E2 LTR MaLR 137 425 -201 1944 170 3 0 chr2 197181334 197181645 -56074938 + AluSx SINE Alu 1 312 0 1207 294 54 35 chr2 197181645 197181850 -56074733 + MLT1E2 LTR MaLR 425 625 -1 600 103 75 28 chr2 197182257 197182364 -56074219 + AluSc SINE Alu 198 309 0 2115 78 11 14 chr2 197182847 197183156 -56073427 + AluY SINE Alu 1 308 0 2119 98 10 7 chr2 197183663 197183958 -56072625 + AluSp SINE Alu 1 296 -17 203 0 37 0 chr2 197184027 197184054 -56072529 + (TA)n Simple_repeat Simple_repeat 2 29 0 249 261 0 0 chr2 197184058 197184146 -56072437 + L1MC4 LINE L1 6616 6703 -1339 519 245 50 7 chr2 197184153 197184297 -56072286 - MIR SINE MIR -58 204 54 2462 148 41 0 chr2 197184829 197185240 -56071343 - MSTA LTR MaLR 0 428 1 21 36 0 0 chr2 197186178 197186206 -56070377 + AT_rich Low_complexity Low_complexity 1 28 0 2070 123 7 0 chr2 197186528 197186829 -56069754 + AluSg1 SINE Alu 1 303 -6 2765 241 70 11 chr2 197186960 197187884 -56068699 - L1M4 LINE L1 -860 5286 4308 362 213 38 12 chr2 197189484 197189564 -56067019 + MLT1I LTR MaLR 92 173 -236 253 270 54 18 chr2 197189682 197189793 -56066790 + MLT1I LTR MaLR 289 403 -6 25 0 0 0 chr2 197190686 197190711 -56065872 + AT_rich Low_complexity Low_complexity 1 25 0 1724 213 31 62 chr2 197193265 197193782 -56062801 - MLT1D LTR MaLR -3 502 2 3773 201 29 84 chr2 197194356 197195838 -56060745 - pTR5 LTR ERV1 0 2606 1524 278 345 9 17 chr2 197195838 197195954 -56060629 - MIR SINE MIR -109 153 39 5034 146 63 10 chr2 197196053 197197016 -56059567 + L1MA7 LINE L1 5277 6290 -1 295 326 11 0 chr2 197197383 197197478 -56059105 + MIR SINE MIR 67 162 -100 2116 112 0 34 chr2 197198005 197198327 -56058256 - AluSx SINE Alu -1 311 1 401 296 75 2 chr2 197198692 197198871 -56057712 - Zaphod DNA AcHobo 0 4031 505 818 237 8 25 chr2 197198890 197199126 -56057457 - Zaphod DNA AcHobo -145 3886 3655 1708 251 102 27 chr2 197199150 197199886 -56056697 - Zaphod DNA AcHobo -3056 975 184 1104 249 83 49 chr2 197199886 197200376 -56056207 + LTR1 LTR ERV1 1 498 -328 387 271 29 24 chr2 197200419 197200589 -56055994 + LTR1B LTR ERV1 650 820 -6 752 223 71 113 chr2 197200758 197201067 -56055516 + MER77 LTR ERV1 55 350 -255 1299 161 0 5 chr2 197201164 197201375 -56055208 - MER2 DNA MER2_type -135 210 1 711 246 70 55 chr2 197201457 197201713 -56054870 + MER21B LTR ERV1 410 669 -194 521 206 92 0 chr2 197201955 197202016 -56054567 - L1MA10 LINE L1 -1 6333 6273 2714 257 65 23 chr2 197202016 197204817 -56051766 - L1ME1 LINE L1 -62 6173 3184 433 272 22 17 chr2 197204815 197204995 -56051588 - L1ME1 LINE L1 -4043 2353 2173 * 2549 279 55 26 chr2 197204971 197206101 -56050482 - L1MC4 LINE L1 -133 7978 6817 361 271 46 79 chr2 197206120 197206400 -56050183 - L1MC4a LINE L1 -1480 6397 6127 555 187 5 43 chr2 197206687 197206874 -56049709 + GA-rich Low_complexity Low_complexity 1 180 0 21 36 0 0 chr2 197207571 197207599 -56048984 + AT_rich Low_complexity Low_complexity 1 28 0 304 291 53 26 chr2 197208297 197208448 -56048135 + L2 LINE L2 3060 3214 -99 296 360 75 0 chr2 197209273 197209420 -56047163 - L2 LINE L2 -9 3304 3147 301 343 29 0 chr2 197209950 197210055 -56046528 - L2 LINE L2 -961 2353 2246 876 289 73 31 chr2 197210078 197210462 -56046121 - L2 LINE L2 0 3313 2914 6950 192 13 1 chr2 197210527 197211140 -56045443 - L1 LINE L1 -1115 5031 4427 234 0 0 0 chr2 197211140 197211166 -56045417 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 6950 192 13 1 chr2 197211166 197211976 -56044607 - L1 LINE L1 -1719 4427 3591 6582 79 3 2 chr2 197211980 197213051 -56043532 + L1PB1 LINE L1 5078 6150 -1 180 125 0 0 chr2 197213088 197213120 -56043463 + (GGAGAA)n Simple_repeat Simple_repeat 3 34 0 * 311 223 0 34 chr2 197213113 197213261 -56043322 + GA-rich Low_complexity Low_complexity 2 144 0 247 307 153 40 chr2 197213576 197213804 -56042779 - L3 LINE CR1 -656 921 668 201 196 0 0 chr2 197214562 197214608 -56041975 + (TA)n Simple_repeat Simple_repeat 1 46 0 359 216 62 0 chr2 197215231 197215328 -56041255 + MARNA DNA Mariner 148 250 -336 481 300 150 0 chr2 197215561 197215721 -56040862 + MIR SINE MIR 1 184 -78 195 114 0 0 chr2 197215727 197215762 -56040821 + (TG)n Simple_repeat Simple_repeat 2 36 0 200 333 45 0 chr2 197215934 197216000 -56040583 - L2 LINE L2 0 3272 3204 21 36 0 0 chr2 197216468 197216496 -56040087 + AT_rich Low_complexity Low_complexity 1 28 0 303 325 57 16 chr2 197216566 197216689 -56039894 - L2 LINE L2 -6 3266 3139 25 0 0 0 chr2 197218353 197218378 -56038205 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr2 197218576 197218604 -56037979 + AT_rich Low_complexity Low_complexity 1 28 0 325 386 67 29 chr2 197218819 197219135 -56037448 - L2 LINE L2 -21 3251 2924 2065 54 8 0 chr2 197223540 197223799 -56032784 + AluY SINE Alu 39 299 -12 255 337 11 41 chr2 197226627 197226941 -56029642 + CT-rich Low_complexity Low_complexity 1 304 0 180 0 0 0 chr2 197229601 197229621 -56026962 + (A)n Simple_repeat Simple_repeat 1 20 0 610 335 30 17 chr2 197230642 197230875 -56025708 + MIR SINE MIR 6 241 -21 24 53 0 0 chr2 197231114 197231152 -56025431 + AT_rich Low_complexity Low_complexity 1 38 0 24 0 0 0 chr2 197231597 197231621 -56024962 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr2 197232271 197232293 -56024290 + AT_rich Low_complexity Low_complexity 1 22 0 21 71 0 0 chr2 197232382 197232424 -56024159 + AT_rich Low_complexity Low_complexity 1 42 0 21 57 0 0 chr2 197232984 197233019 -56023564 + AT_rich Low_complexity Low_complexity 1 35 0 292 221 78 0 chr2 197236746 197236823 -56019760 - MIR SINE MIR -5 257 175 235 314 58 0 chr2 197237507 197237593 -56018990 + MIR3 SINE MIR 117 207 -1 23 33 0 0 chr2 197238694 197238724 -56017859 + AT_rich Low_complexity Low_complexity 1 30 0 183 162 0 0 chr2 197239817 197239854 -56016729 + (TA)n Simple_repeat Simple_repeat 1 37 0 23 0 0 0 chr2 197242265 197242288 -56014295 + AT_rich Low_complexity Low_complexity 1 23 0 236 233 17 0 chr2 197243144 197243204 -56013379 + (TA)n Simple_repeat Simple_repeat 1 61 0 273 364 66 26 chr2 197243416 197243567 -56013016 - MIR SINE MIR -86 176 20 185 344 80 26 chr2 197246081 197246232 -56010351 + MIR SINE MIR 58 216 -46 22 0 0 0 chr2 197246501 197246523 -56010060 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr2 197247095 197247117 -56009466 + (TG)n Simple_repeat Simple_repeat 2 23 0 231 130 0 0 chr2 197247117 197247163 -56009420 - LTR66 LTR ERVL -171 439 394 2133 108 0 0 chr2 197247552 197247839 -56008744 + AluSx SINE Alu 1 287 -25 292 160 0 47 chr2 197247839 197247945 -56008638 + (TA)n Simple_repeat Simple_repeat 1 101 0 2149 244 28 13 chr2 197251114 197251650 -56004933 + L1MD2 LINE L1 5799 6342 -17 22 70 0 0 chr2 197251677 197251720 -56004863 + AT_rich Low_complexity Low_complexity 1 43 0 23 0 0 0 chr2 197252212 197252235 -56004348 + AT_rich Low_complexity Low_complexity 1 23 0 256 83 42 0 chr2 197253925 197253973 -56002610 + (TCTA)n Simple_repeat Simple_repeat 3 52 0 195 42 0 0 chr2 197253973 197253997 -56002586 + (TCTCCC)n Simple_repeat Simple_repeat 1 24 0 28 61 0 0 chr2 197255320 197255369 -56001214 + AT_rich Low_complexity Low_complexity 1 49 0 25 31 0 0 chr2 197256612 197256644 -55999939 + AT_rich Low_complexity Low_complexity 1 32 0 636 99 0 0 chr2 197256644 197256745 -55999838 - L1MA7 LINE L1 -2 6289 6189 749 228 102 5 chr2 197256773 197256988 -55999595 - MER106A DNA MER1_type 0 236 1 190 171 0 49 chr2 197257822 197257863 -55998720 + (TA)n Simple_repeat Simple_repeat 1 39 0 22 56 0 0 chr2 197257895 197257931 -55998652 + AT_rich Low_complexity Low_complexity 1 36 0 408 20 0 0 chr2 197257931 197257980 -55998603 + (TA)n Simple_repeat Simple_repeat 2 50 0 500 0 17 0 chr2 197257991 197258051 -55998532 + (TAGA)n Simple_repeat Simple_repeat 4 64 0 26 50 0 0 chr2 197258250 197258290 -55998293 + AT_rich Low_complexity Low_complexity 1 40 0 318 143 0 0 chr2 197261290 197261339 -55995244 - MADE1 DNA Mariner -1 79 31 24 53 0 0 chr2 197263695 197263733 -55992850 + AT_rich Low_complexity Low_complexity 1 38 0 1435 166 55 44 chr2 197263975 197264337 -55992246 + L1MA8 LINE L1 5899 6264 -27 267 31 0 0 chr2 197264337 197264369 -55992214 + (TA)n Simple_repeat Simple_repeat 1 32 0 316 308 78 86 chr2 197264601 197264804 -55991779 + LTR67 LTR ERVL 8 211 -346 1616 221 33 58 chr2 197264804 197265320 -55991263 - MLT1D LTR MaLR 0 505 3 316 308 78 86 chr2 197265320 197265664 -55990919 + LTR67 LTR ERVL 211 551 -6 455 280 6 6 chr2 197316261 197316576 -55940007 + G-rich Low_complexity Low_complexity 1 315 0 433 170 43 0 chr2 197316595 197316689 -55939894 + L1PA2 LINE L1 6055 6152 -3 27 49 0 0 chr2 197316689 197316730 -55939853 + AT_rich Low_complexity Low_complexity 1 41 0 365 340 75 62 chr2 197316771 197317142 -55939441 - L2 LINE L2 -429 2885 2510 431 268 51 35 chr2 197317147 197317401 -55939182 + MIR SINE MIR 1 258 -4 200 159 23 0 chr2 197317434 197317478 -55939105 - L3 LINE CR1 -857 720 676 2271 19 0 0 chr2 197318684 197318943 -55937640 + L1PA3 LINE L1 5894 6152 -3 983 231 17 0 chr2 197318963 197319201 -55937382 + MLT1D LTR MaLR 264 505 0 1552 241 39 3 chr2 197319330 197319691 -55936892 - MLT1A2 LTR MaLR 0 374 1 618 169 89 0 chr2 197320419 197320543 -55936040 + L1PB4 LINE L1 6019 6153 -3 2360 182 5 7 chr2 197321264 197321699 -55934884 + Tigger2a DNA MER2_type 1 434 0 21 36 0 0 chr2 197322194 197322222 -55934361 + AT_rich Low_complexity Low_complexity 1 28 0 301 295 101 22 chr2 197322701 197322840 -55933743 - L2 LINE L2 -5 3308 3159 27 0 0 0 chr2 197323168 197323195 -55933388 + AT_rich Low_complexity Low_complexity 1 27 0 2241 108 6 10 chr2 197323204 197323518 -55933065 - AluSq SINE Alu 0 313 1 25 0 0 0 chr2 197324014 197324039 -55932544 + AT_rich Low_complexity Low_complexity 1 25 0 1999 119 0 47 chr2 197325755 197326075 -55930508 - AluSx SINE Alu -7 305 1 302 224 0 0 chr2 197326610 197326668 -55929915 + Charlie8 DNA MER1_type 2352 2409 -8 230 95 24 0 chr2 197326910 197326952 -55929631 + (CA)n Simple_repeat Simple_repeat 1 43 0 218 175 0 18 chr2 197328590 197328647 -55927936 + (TA)n Simple_repeat Simple_repeat 2 57 0 180 0 0 0 chr2 197328933 197328953 -55927630 + (A)n Simple_repeat Simple_repeat 1 20 0 241 329 12 12 chr2 197330301 197330383 -55926200 + MIR SINE MIR 63 144 -118 296 331 187 45 chr2 197331924 197332674 -55923909 + L2 LINE L2 1512 2367 -947 803 317 20 43 chr2 197333053 197333447 -55923136 - L2 LINE L2 0 3313 2929 1088 216 53 0 chr2 197333453 197333698 -55922885 - MLT1D LTR MaLR 0 505 248 995 238 51 21 chr2 197334050 197334382 -55922201 - MLT1D LTR MaLR -152 353 12 541 329 81 52 chr2 197334475 197334586 -55921997 - L2 LINE L2 -501 2813 2707 2264 88 0 10 chr2 197334586 197334882 -55921701 - AluSg SINE Alu -17 293 1 541 329 81 52 chr2 197334882 197335117 -55921466 - L2 LINE L2 -607 2707 2457 1479 157 66 18 chr2 197335569 197335843 -55920740 - AluJo SINE Alu -14 298 12 592 272 66 53 chr2 197335951 197336194 -55920389 - MIR SINE MIR 0 262 17 334 256 97 102 chr2 197336657 197336833 -55919750 - MIR SINE MIR -19 243 69 843 271 28 9 chr2 197336955 197337173 -55919410 + MIR SINE MIR 36 257 -5 579 68 51 43 chr2 197337246 197337363 -55919220 + AluSg SINE Alu 1 118 -192 346 306 0 0 chr2 197337363 197337497 -55919086 + C-rich Low_complexity Low_complexity 1 134 0 452 80 27 86 chr2 197337498 197337685 -55918898 + (CCCCCA)n Simple_repeat Simple_repeat 4 179 0 199 132 29 29 chr2 197337740 197337808 -55918775 + (CACCC)n Simple_repeat Simple_repeat 3 70 0 204 318 48 32 chr2 197337937 197338000 -55918583 - L2 LINE L2 -94 3178 3115 961 69 0 0 chr2 197338582 197338698 -55917885 + AluY SINE Alu 187 302 -9 203 389 154 13 chr2 197339537 197339686 -55916897 + L2 LINE L2 3102 3271 -1 2306 102 3 0 chr2 197339908 197340202 -55916381 - AluSp SINE Alu -18 295 1 1020 137 25 49 chr2 197340270 197340474 -55916109 + MLT1C LTR MaLR 6 204 -263 386 103 0 44 chr2 197340477 197340545 -55916038 + MLT1C LTR MaLR 403 467 0 222 219 0 0 chr2 197340775 197340816 -55915767 - MIR SINE MIR -169 93 53 22 0 0 0 chr2 197341671 197341693 -55914890 + AT_rich Low_complexity Low_complexity 1 22 0 235 227 53 13 chr2 197342416 197342491 -55914092 + C-rich Low_complexity Low_complexity 1 78 0 380 297 95 14 chr2 197343079 197343227 -55913356 + MIR SINE MIR 61 220 -42 416 310 103 7 chr2 197344081 197344236 -55912347 - MER5B DNA MER1_type -2 176 7 21 0 0 0 chr2 197345040 197345061 -55911522 + AT_rich Low_complexity Low_complexity 1 21 0 216 329 0 24 chr2 197345578 197345663 -55910920 - L2 LINE L2 -1 3312 3230 194 158 26 0 chr2 197345919 197345957 -55910626 - L2 LINE L2 -4 3309 3271 265 345 24 0 chr2 197346034 197346118 -55910465 + L2 LINE L2 3162 3247 -25 566 298 46 94 chr2 197346384 197346713 -55909870 - L2 LINE L2 -1 3312 3000 2200 120 0 0 chr2 197348185 197348477 -55908106 + AluSx SINE Alu 1 292 -20 429 283 38 59 chr2 197350116 197350377 -55906206 + L1MC/D LINE L1 5266 5522 -599 550 258 22 39 chr2 197350686 197350868 -55905715 - MER97a DNA MER1_type? -715 179 1 2254 86 0 3 chr2 197350974 197351266 -55905317 + AluSx SINE Alu 2 292 -20 976 219 132 46 chr2 197351388 197351775 -55904808 - L1ME1 LINE L1 -5 6161 5754 643 186 8 0 chr2 197352707 197352831 -55903752 + FLAM_A SINE Alu 18 142 0 640 165 0 18 chr2 197352846 197352955 -55903628 + FRAM SINE Alu 55 161 -15 22 94 0 0 chr2 197353758 197353822 -55902761 + AT_rich Low_complexity Low_complexity 1 64 0 195 157 0 0 chr2 197354427 197354478 -55902105 + A-rich Low_complexity Low_complexity 1 51 0 393 127 13 38 chr2 197354645 197354724 -55901859 + AluS SINE Alu 1 77 -226 2199 103 3 0 chr2 197355703 197355993 -55900590 + AluSx SINE Alu 1 291 -21 334 270 228 11 chr2 197357159 197357348 -55899235 - MIR SINE MIR 0 262 33 258 194 0 0 chr2 197357721 197357783 -55898800 + (TA)n Simple_repeat Simple_repeat 1 62 0 29 47 0 0 chr2 197357890 197357933 -55898650 + AT_rich Low_complexity Low_complexity 1 43 0 30 69 0 0 chr2 197358084 197358142 -55898441 + AT_rich Low_complexity Low_complexity 1 58 0 416 291 39 84 chr2 197358991 197359349 -55897234 - Charlie8 DNA MER1_type -2050 367 26 2131 103 0 3 chr2 197359388 197359670 -55896913 - AluSg SINE Alu -29 281 1 3178 187 25 16 chr2 197359857 197360524 -55896059 + L1MC3 LINE L1 6596 7268 -517 1042 135 0 0 chr2 197360529 197360685 -55895898 + AluSp SINE Alu 141 296 -17 2310 153 113 6 chr2 197360699 197361176 -55895407 + L1MC3 LINE L1 7256 7783 -2 2192 119 0 0 chr2 197361189 197361491 -55895092 + AluSg SINE Alu 1 302 -8 228 293 140 33 chr2 197362667 197362817 -55893766 - MIR SINE MIR 0 262 97 22 56 0 0 chr2 197363560 197363596 -55892987 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr2 197363758 197363779 -55892804 + AT_rich Low_complexity Low_complexity 1 21 0 599 315 20 0 chr2 197364545 197364694 -55891889 + MER91A DNA MER1_type 2 153 -43 226 148 37 0 chr2 197365924 197365978 -55890605 + (TA)n Simple_repeat Simple_repeat 2 57 0 24 32 0 0 chr2 197366015 197366046 -55890537 + AT_rich Low_complexity Low_complexity 1 31 0 182 382 27 9 chr2 197366927 197367037 -55889546 + L2 LINE L2 3200 3311 -2 21 0 0 0 chr2 197367997 197368018 -55888565 + AT_rich Low_complexity Low_complexity 1 21 0 1860 130 4 4 chr2 197369500 197369776 -55886807 + AluSx SINE Alu 1 276 -36 23 78 0 0 chr2 197371114 197371165 -55885418 + AT_rich Low_complexity Low_complexity 1 51 0 524 286 91 17 chr2 197371419 197371594 -55884989 - L3 LINE CR1 -18 1559 1372 282 368 26 47 chr2 197372740 197372930 -55883653 - MIR SINE MIR -43 219 34 448 319 32 37 chr2 197373919 197374107 -55882476 - MIR SINE MIR -43 219 33 206 234 21 0 chr2 197374758 197374805 -55881778 + (CA)n Simple_repeat Simple_repeat 1 48 0 614 165 91 0 chr2 197375279 197375400 -55881183 - FLAM_C SINE Alu -5 138 7 199 390 41 8 chr2 197375435 197375558 -55881025 + L2 LINE L2 3187 3313 0 1593 188 0 29 chr2 197375625 197375933 -55880650 - AluJo SINE Alu -13 299 1 454 162 45 10 chr2 197376098 197376254 -55880329 + MER3 DNA MER1_type 1 207 -2 29 60 0 0 chr2 197376305 197376355 -55880228 + AT_rich Low_complexity Low_complexity 1 50 0 1959 233 21 54 chr2 197376358 197376873 -55879710 - MLT1D LTR MaLR 0 505 8 282 245 226 9 chr2 197376881 197376987 -55879596 + L2 LINE L2 3185 3313 0 22 0 0 0 chr2 197377039 197377061 -55879522 + AT_rich Low_complexity Low_complexity 1 22 0 218 192 0 13 chr2 197377751 197377829 -55878754 + (TA)n Simple_repeat Simple_repeat 2 78 0 433 246 98 8 chr2 197378880 197379002 -55877581 + L2 LINE L2 3173 3305 -8 775 178 45 38 chr2 197380663 197380820 -55875763 + AluSg/x SINE Alu 129 286 -24 46 19 0 0 chr2 197380820 197380873 -55875710 + AT_rich Low_complexity Low_complexity 1 53 0 317 320 28 44 chr2 197381343 197381524 -55875059 + L2 LINE L2 1606 1783 -1531 2214 99 36 0 chr2 197381754 197382056 -55874527 - AluSp SINE Alu 0 313 1 194 222 22 0 chr2 197382601 197382646 -55873937 - L2 LINE L2 -6 3307 3262 303 344 104 16 chr2 197383126 197383251 -55873332 + L2 LINE L2 3137 3272 0 21 0 0 0 chr2 197384039 197384060 -55872523 + AT_rich Low_complexity Low_complexity 1 21 0 207 315 0 11 chr2 197384060 197384152 -55872431 + CT-rich Low_complexity Low_complexity 3 93 0 412 321 0 0 chr2 197384750 197384862 -55871721 - MIR SINE MIR -67 141 30 24 0 0 0 chr2 197386242 197386266 -55870317 + AT_rich Low_complexity Low_complexity 1 24 0 348 305 49 38 chr2 197386529 197386675 -55869908 - MIR SINE MIR -49 159 10 213 39 0 0 chr2 197386877 197386903 -55869680 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 2092 62 21 10 chr2 197388472 197388760 -55867823 - AluY SINE Alu -18 293 3 21 0 0 0 chr2 197388761 197388782 -55867801 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr2 197390091 197390126 -55866457 + AT_rich Low_complexity Low_complexity 1 35 0 1869 107 24 24 chr2 197390245 197390535 -55866048 - AluSq SINE Alu -23 290 1 278 359 10 0 chr2 197390663 197390766 -55865817 - MIR SINE MIR -111 151 48 42 48 0 0 chr2 197391339 197391402 -55865181 + AT_rich Low_complexity Low_complexity 1 63 0 642 346 133 41 chr2 197391694 197392604 -55863979 - L2 LINE L2 -452 2862 1869 1336 218 32 42 chr2 197393774 197394232 -55862351 + MSTD LTR MaLR 15 394 -2 268 322 115 14 chr2 197394542 197394750 -55861833 - MIR SINE MIR -11 251 23 1667 181 29 31 chr2 197394830 197395250 -55861333 + Charlie1 DNA MER1_type 2343 2761 0 305 271 132 77 chr2 197395368 197395708 -55860875 - L1ME4a LINE L1 -74 6047 5689 * 2148 113 0 0 chr2 197395676 197395986 -55860597 - L1P LINE L1 -2032 4114 3805 * 8264 110 16 1 chr2 197395984 197397243 -55859340 + L1P LINE L1 4114 5391 -755 474 262 138 13 chr2 197397246 197397544 -55859039 - L1MCa LINE L1 -4826 2115 1781 462 250 29 15 chr2 197397578 197397714 -55858869 - L1MCa LINE L1 -6253 170 33 237 276 13 77 chr2 197397736 197397892 -55858691 - HAL1b LINE L1 -426 922 777 812 295 87 6 chr2 197397903 197398272 -55858311 - LTR33 LTR ERVL -101 420 1 1981 78 0 0 chr2 197399977 197400222 -55856361 + AluY SINE Alu 50 294 -17 234 359 64 32 chr2 197400276 197400432 -55856151 + L2 LINE L2 2873 3033 -280 24 0 0 0 chr2 197400597 197400621 -55855962 + AT_rich Low_complexity Low_complexity 1 24 0 5399 84 23 4 chr2 197400621 197401370 -55855213 - L1PA8 LINE L1 -7 6165 5403 462 250 29 15 chr2 197401404 197401540 -55855043 + L1MCc LINE L1 33 170 -6253 992 272 102 40 chr2 197401560 197402255 -55854328 + L1MCc LINE L1 1972 2709 -4413 260 200 164 9 chr2 197402283 197402393 -55854190 + L1MCc LINE L1 2763 2889 -4233 * 422 312 72 51 chr2 197402390 197402883 -55853700 + L1MEc LINE L1 972 1464 -4665 33 73 0 0 chr2 197402996 197403064 -55853519 + AT_rich Low_complexity Low_complexity 1 68 0 2582 45 0 0 chr2 197404925 197405236 -55851347 - AluY SINE Alu 0 311 1 322 283 24 73 chr2 197405718 197405923 -55850660 + MER117 DNA MER1_type 1 195 -2 350 318 28 3 chr2 197406293 197406478 -55850105 - MIR SINE MIR -10 252 10 235 324 110 7 chr2 197406609 197406754 -55849829 + MIR SINE MIR 99 258 -4 243 280 77 65 chr2 197408500 197408668 -55847915 - L2 LINE L2 0 3313 3144 496 338 152 11 chr2 197408672 197409220 -55847363 + L2 LINE L2 1765 2389 -925 356 280 47 19 chr2 197409280 197409387 -55847196 + L2 LINE L2 3203 3312 -1 326 238 119 0 chr2 197409784 197409885 -55846698 + LTR50 LTR ERVL 8 120 -675 358 275 113 6 chr2 197410003 197410193 -55846390 + LTR50 LTR ERVL 356 642 -153 255 312 64 0 chr2 197410170 197410295 -55846288 + LTR33A LTR ERVL 391 523 0 * 241 267 100 33 chr2 197410297 197410387 -55846196 - L2 LINE L2 -623 2691 2596 649 273 141 9 chr2 197410434 197410654 -55845929 - MIR SINE MIR 0 262 14 436 312 84 56 chr2 197410655 197411014 -55845569 - L2 LINE L2 -757 2557 2189 436 291 42 58 chr2 197412539 197412800 -55843783 + L1ME3A LINE L1 5266 5522 -2286 580 260 22 33 chr2 197413107 197413288 -55843295 - MER97a DNA MER1_type? -715 179 1 2307 84 0 3 chr2 197413394 197413690 -55842893 + AluSx SINE Alu 2 296 -16 261 83 0 0 chr2 197413902 197413938 -55842645 + (TA)n Simple_repeat Simple_repeat 2 37 0 1916 149 0 3 chr2 197413938 197414227 -55842356 - AluSq SINE Alu -25 288 1 712 215 152 27 chr2 197414478 197414734 -55841849 + L1MC5 LINE L1 7246 7533 -428 334 314 46 29 chr2 197414871 197415046 -55841537 + L1ME3A LINE L1 5987 6164 -6 423 282 100 67 chr2 197415055 197415594 -55840989 + L1ME4a LINE L1 5482 6038 -83 24 0 0 0 chr2 197415614 197415638 -55840945 + AT_rich Low_complexity Low_complexity 1 24 0 366 317 25 55 chr2 197415945 197416144 -55840439 - MIR SINE MIR -34 228 36 508 254 0 0 chr2 197416224 197416338 -55840245 - MER81 DNA DNA 0 114 1 1492 157 23 26 chr2 197416346 197416652 -55839931 + MER33 DNA MER1_type 5 309 -15 26 0 0 0 chr2 197417539 197417565 -55839018 + AT_rich Low_complexity Low_complexity 1 26 0 372 290 175 37 chr2 197417673 197417890 -55838693 + MIR SINE MIR 16 262 0 1206 272 77 28 chr2 197418317 197418681 -55837902 + MER69 DNA AcHobo 64 445 -2081 1349 238 97 8 chr2 197419224 197419607 -55836976 + MLT1C LTR MaLR 5 421 -46 2149 275 56 20 chr2 197419633 197420349 -55836234 + MER69 DNA AcHobo 438 1179 -1347 703 191 37 6 chr2 197420388 197420550 -55836033 + MER69 DNA AcHobo 2356 2522 -4 393 262 202 39 chr2 197420856 197420870 -55835713 - LTR16A LTR ERVL -179 271 261 706 220 51 45 chr2 197420870 197421047 -55835536 + MER45A DNA AcHobo 1 178 0 393 262 202 39 chr2 197421047 197421265 -55835318 - LTR16A LTR ERVL -189 261 1 677 254 57 5 chr2 197421870 197422079 -55834504 + L2 LINE L2 3094 3313 0 180 0 0 0 chr2 197422560 197422580 -55834003 + (TAA)n Simple_repeat Simple_repeat 2 21 0 402 303 0 18 chr2 197423237 197423363 -55833220 - MER5A DNA MER1_type 0 189 55 1314 261 97 35 chr2 197424522 197425005 -55831578 + L1ME3A LINE L1 5653 6165 -5 2078 131 0 0 chr2 197425445 197425736 -55830847 + AluSx SINE Alu 1 291 -21 547 292 54 54 chr2 197426942 197427182 -55829401 + MIR SINE MIR 22 261 -1 1096 278 71 41 chr2 197427322 197427714 -55828869 + L1MB1 LINE L1 1 404 -5487 346 309 33 53 chr2 197427767 197427919 -55828664 + L1MB1 LINE L1 522 670 -5221 838 241 160 21 chr2 197428108 197428390 -55828193 + L1MB1 LINE L1 680 1000 -4891 * 12294 203 41 17 chr2 197428377 197430455 -55826128 + L1MB1 LINE L1 1921 3949 -2043 192 77 0 0 chr2 197430455 197430481 -55826102 + (CA)n Simple_repeat Simple_repeat 1 26 0 12294 203 41 17 chr2 197430481 197432375 -55824208 + L1MB1 LINE L1 3949 5992 0 1457 227 13 3 chr2 197433635 197433948 -55822635 + MLT1A1 LTR MaLR 1 316 -49 601 185 31 3 chr2 197434683 197434877 -55821706 + Tigger5 DNA MER2_type 1 265 -2058 423 191 0 24 chr2 197434896 197434980 -55821603 + Tigger5 DNA MER2_type 2242 2323 0 452 324 34 47 chr2 197435204 197435670 -55820913 - HAL1b LINE L1 -445 903 444 310 259 90 95 chr2 197435672 197435861 -55820722 + MIR SINE MIR 3 190 -72 799 165 52 139 chr2 197435879 197436224 -55820359 - MER33 DNA MER1_type -9 315 1 273 216 113 0 chr2 197436424 197436521 -55820062 - L1ME3A LINE L1 -5 6165 6058 2132 262 48 46 chr2 197436537 197436799 -55819784 - L1ME3A LINE L1 -200 5970 5710 2606 181 45 31 chr2 197436799 197437351 -55819232 + MER68 LTR ERV1 3 562 0 2132 262 48 46 chr2 197437351 197438051 -55818532 - L1ME3A LINE L1 -460 5710 5006 361 259 67 47 chr2 197438079 197438272 -55818311 - HAL1b LINE L1 -995 353 157 242 188 0 21 chr2 197439522 197439568 -55817015 - THE1B LTR MaLR 0 364 320 2336 134 8 16 chr2 197439568 197439941 -55816642 - THE1C LTR MaLR 0 375 6 21 0 0 0 chr2 197439987 197440008 -55816575 + AT_rich Low_complexity Low_complexity 1 21 0 579 294 20 37 chr2 197440053 197440298 -55816285 - MER102a DNA MER1_type -10 320 80 2087 179 39 85 chr2 197440303 197440562 -55816021 + MLT1D LTR MaLR 12 237 -268 2251 19 0 0 chr2 197440562 197440821 -55815762 + L1PA3 LINE L1 5894 6152 -3 2087 179 39 85 chr2 197440821 197441079 -55815504 + MLT1D LTR MaLR 237 505 0 1577 238 39 3 chr2 197441208 197441569 -55815014 - MLT1A2 LTR MaLR 0 374 1 662 169 89 0 chr2 197442297 197442421 -55814162 + L1PB4 LINE L1 6019 6153 -3 1106 172 44 10 chr2 197442538 197442742 -55813841 + AluJb SINE Alu 88 298 -14 303 272 95 19 chr2 197442943 197443117 -55813466 - L1P4 LINE L1 -698 5468 5283 456 318 101 12 chr2 197443291 197443509 -55813074 - MIR SINE MIR -13 249 16 233 179 0 18 chr2 197444230 197444286 -55812297 + GA-rich Low_complexity Low_complexity 3 57 0 1896 135 129 9 chr2 197444349 197444674 -55811909 - THE1B LTR MaLR 0 364 1 2257 81 3 0 chr2 197444674 197444972 -55811611 - THE1B-int LTR MaLR 0 1580 1282 * 5783 72 6 88 chr2 197444941 197445844 -55810739 - THE1B-int LTR MaLR -751 829 1 2079 135 48 25 chr2 197445844 197446200 -55810383 - THE1B LTR MaLR 0 364 1 2103 46 46 8 chr2 197446524 197446786 -55809797 - AluY SINE Alu -10 301 30 2014 143 3 0 chr2 197448621 197448921 -55807662 - AluSx SINE Alu -11 301 1 2070 130 0 3 chr2 197450731 197451039 -55805544 - AluSq SINE Alu -6 307 1 848 284 27 5 chr2 197451232 197451454 -55805129 - MIR SINE MIR -21 241 15 229 277 133 31 chr2 197451637 197451893 -55804690 + L2 LINE L2 1487 1768 -1546 272 214 129 0 chr2 197452058 197452128 -55804455 + MIR SINE MIR 112 190 -72 22 0 0 0 chr2 197452179 197452201 -55804382 + AT_rich Low_complexity Low_complexity 1 22 0 417 245 9 19 chr2 197452380 197452486 -55804097 - L2 LINE L2 0 3313 3209 7425 28 6 2 chr2 197452726 197453809 -55802774 + L1PA5 LINE L1 5065 6151 -3 27 49 0 0 chr2 197453809 197453850 -55802733 + AT_rich Low_complexity Low_complexity 1 41 0 361 340 75 62 chr2 197453891 197454262 -55802321 - L2 LINE L2 -429 2885 2510 446 279 47 31 chr2 197454267 197454521 -55802062 + MIR SINE MIR 1 258 -4 195 159 23 0 chr2 197454554 197454598 -55801985 - L3 LINE CR1 -857 720 676 215 370 93 97 chr2 197456656 197456967 -55799616 - L2 LINE L2 -4 3268 2959 188 264 111 42 chr2 197457110 197457182 -55799401 - L2 LINE L2 -28 3244 3168 693 256 136 39 chr2 197457654 197457692 -55798891 - L1MC4a LINE L1 -1948 5860 5827 1909 105 87 7 chr2 197457692 197457969 -55798614 - AluSg SINE Alu -11 299 1 693 256 136 39 chr2 197457969 197458262 -55798321 - L1MC4a LINE L1 -1981 5827 5497 22 0 0 0 chr2 197458452 197458474 -55798109 + AT_rich Low_complexity Low_complexity 1 22 0 2406 93 0 0 chr2 197458874 197459184 -55797399 + AluY SINE Alu 1 310 -1 283 265 182 23 chr2 197459920 197460052 -55796531 + MIR3 SINE MIR 41 193 -15 371 367 60 14 chr2 197461760 197461975 -55794608 + L3b LINE CR1 1279 1503 -80 28 48 0 0 chr2 197462056 197462098 -55794485 + AT_rich Low_complexity Low_complexity 1 42 0 22 70 0 0 chr2 197463027 197463070 -55793513 + AT_rich Low_complexity Low_complexity 1 43 0 336 133 0 0 chr2 197463375 197463435 -55793148 + (CA)n Simple_repeat Simple_repeat 2 61 0 22 0 0 0 chr2 197463621 197463643 -55792940 + AT_rich Low_complexity Low_complexity 1 22 0 266 185 46 0 chr2 197463777 197463842 -55792741 - MER20B DNA MER1_type -171 612 545 800 253 120 39 chr2 197463987 197464295 -55792288 - MER20B DNA MER1_type -448 335 3 2463 177 97 14 chr2 197464408 197464963 -55791620 + MER7C DNA MER2_type 1 601 -1 266 247 14 0 chr2 197464971 197465044 -55791539 + L1ME3A LINE L1 2756 2829 -3317 429 282 66 24 chr2 197465130 197465343 -55791240 + L1ME3A LINE L1 4316 4537 -1609 546 275 18 0 chr2 197465391 197465558 -55791025 + L1ME3A LINE L1 5793 5962 -208 636 188 55 18 chr2 197466118 197466283 -55790300 + L1MB7 LINE L1 4971 5141 -1005 1587 218 76 10 chr2 197466283 197466692 -55789891 - MLT1C LTR MaLR -24 443 8 3958 167 36 30 chr2 197466719 197467186 -55789397 + L1MB7 LINE L1 5345 5821 -363 2102 130 0 0 chr2 197467186 197467479 -55789104 + AluSg SINE Alu 1 293 -17 3958 167 36 30 chr2 197467479 197467838 -55788745 + L1MB7 LINE L1 5821 6176 -8 43 56 0 0 chr2 197467977 197468048 -55788535 + AT_rich Low_complexity Low_complexity 1 71 0 529 290 108 39 chr2 197470057 197470316 -55786267 - L3b LINE CR1 -143 1440 1164 9162 102 25 1 chr2 197470316 197471692 -55784891 - L1PA7 LINE L1 -2011 4135 2727 9084 85 0 6 chr2 197471692 197473706 -55782877 + L1PA7 LINE L1 4133 6141 -13 186 267 19 114 chr2 197474298 197474343 -55782240 + MIR SINE MIR 102 133 -129 4669 149 26 12 chr2 197474343 197475183 -55781400 + L1MA8 LINE L1 5436 6287 -4 186 267 19 114 chr2 197475183 197475242 -55781341 + MIR SINE MIR 133 196 -66 21 0 0 0 chr2 197475903 197475924 -55780659 + AT_rich Low_complexity Low_complexity 1 21 0 2287 105 3 0 chr2 197476489 197476793 -55779790 - AluSg SINE Alu -2 308 4 331 195 13 0 chr2 197477067 197477144 -55779439 - MER116 DNA Mariner -2 78 1 358 358 17 8 chr2 197478037 197478157 -55778426 + MIR SINE MIR 32 152 -110 457 262 145 70 chr2 197479552 197480054 -55776529 - L1MDa LINE L1 -1129 1772 1293 26 0 0 0 chr2 197480152 197480178 -55776405 + AT_rich Low_complexity Low_complexity 1 26 0 185 128 0 26 chr2 197480186 197480225 -55776358 + (GAAA)n Simple_repeat Simple_repeat 2 39 0 519 138 0 0 chr2 197481723 197481803 -55774780 - MADE1 DNA Mariner 0 80 1 254 346 13 72 chr2 197481897 197482050 -55774533 - MIR SINE MIR -59 203 60 385 259 122 0 chr2 197482464 197482603 -55773980 - L2 LINE L2 0 3313 3158 1948 115 3 7 chr2 197482695 197482981 -55773602 + AluSq SINE Alu 1 285 -28 25 0 0 0 chr2 197482982 197483007 -55773576 + AT_rich Low_complexity Low_complexity 1 25 0 315 222 19 9 chr2 197483975 197484083 -55772500 + GA-rich Low_complexity Low_complexity 4 112 0 2321 171 26 20 chr2 197484180 197484637 -55771946 + L1MC3 LINE L1 7325 7784 -1 1887 132 142 16 chr2 197485078 197485458 -55771125 - MSTA LTR MaLR 0 428 1 736 196 28 7 chr2 197485489 197485632 -55770951 - Tigger3(Golem) DNA MER2_type -6 3023 2878 263 212 0 91 chr2 197485633 197485699 -55770884 - Tigger3(Golem) DNA MER2_type -2969 60 1 450 0 0 0 chr2 197485864 197485914 -55770669 + (TG)n Simple_repeat Simple_repeat 2 51 0 264 304 30 49 chr2 197486273 197486440 -55770143 - MIR SINE MIR -62 200 37 21 0 0 0 chr2 197487537 197487558 -55769025 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 197487969 197487992 -55768591 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr2 197488079 197488108 -55768475 + AT_rich Low_complexity Low_complexity 1 29 0 195 149 0 43 chr2 197488284 197488331 -55768252 - L2 LINE L2 -4 3309 3265 6583 172 69 31 chr2 197489240 197489866 -55766717 + L1 LINE L1 3346 3947 -2199 2340 97 3 0 chr2 197489866 197490175 -55766408 + AluSx SINE Alu 1 310 -2 6583 172 69 31 chr2 197490175 197491036 -55765547 + L1 LINE L1 3947 4890 -1256 639 191 0 0 chr2 197491036 197491141 -55765442 + Tigger3(Golem) DNA MER2_type 2924 3028 -1 518 318 133 23 chr2 197491175 197491521 -55765062 - L2 LINE L2 -1229 2085 1702 423 0 0 0 chr2 197491524 197491571 -55765012 + (CA)n Simple_repeat Simple_repeat 2 48 0 7171 31 0 0 chr2 197493226 197494083 -55762500 + L1PA3 LINE L1 5299 6155 0 815 297 72 8 chr2 197494090 197494300 -55762283 + LTR16C LTR ERVL 127 351 -140 1599 211 19 39 chr2 197494300 197494619 -55761964 + MLT1A1 LTR MaLR 3 316 -49 2463 65 0 10 chr2 197494619 197494926 -55761657 + AluY SINE Alu 1 304 -7 1599 211 19 39 chr2 197494926 197494970 -55761613 + MLT1A1 LTR MaLR 316 359 -6 476 228 147 0 chr2 197494962 197495098 -55761485 + LTR16C LTR ERVL 334 489 -2 * 1774 158 3 35 chr2 197495614 197495924 -55760659 - AluJo SINE Alu -12 300 1 1954 123 0 36 chr2 197496137 197496438 -55760145 + AluSx SINE Alu 1 290 -22 187 378 12 24 chr2 197496521 197496603 -55759980 + MIR SINE MIR 42 122 -86 407 232 64 0 chr2 197496604 197496729 -55759854 - L1ME2 LINE L1 0 6164 6032 343 286 103 30 chr2 197496736 197496970 -55759613 - L1ME LINE L1 -4834 1144 894 384 276 47 59 chr2 197497015 197497420 -55759163 - L1ME LINE L1 -5145 925 526 417 320 56 10 chr2 197497678 197497875 -55758708 - L1ME LINE L1 -5855 215 10 477 123 12 0 chr2 197498052 197498133 -55758450 + L1MA3 LINE L1 6221 6302 -3 200 331 69 41 chr2 197501380 197501525 -55755058 + MIR SINE MIR 40 188 -74 1740 182 7 3 chr2 197501537 197501828 -55754755 + AluJb SINE Alu 1 292 -20 3969 194 19 10 chr2 197503202 197503920 -55752663 + MER44D DNA MER2_type 9 605 0 2879 125 7 0 chr2 197504167 197504598 -55751985 + MER57B LTR ERV1 1 434 0 374 352 30 49 chr2 197504787 197504985 -55751598 - L1M4 LINE L1 -1857 4289 4096 2051 156 100 5 chr2 197504985 197505376 -55751207 - MSTA LTR MaLR 0 428 1 374 352 30 49 chr2 197505376 197505444 -55751139 - L1M4 LINE L1 -2050 4096 4028 741 295 87 58 chr2 197505825 197505906 -55750677 + ERVL LTR ERVL 4141 4218 -1546 1546 221 11 40 chr2 197505906 197506282 -55750301 + MLT1A1 LTR MaLR 1 365 0 741 295 87 58 chr2 197506282 197506614 -55749969 + ERVL LTR ERVL 4218 4566 -1198 559 261 81 12 chr2 197506921 197507082 -55749501 + LTR16A LTR ERVL 258 429 -21 23 0 0 0 chr2 197508039 197508062 -55748521 + AT_rich Low_complexity Low_complexity 1 23 0 248 140 105 70 chr2 197508134 197508191 -55748392 - MLT1J2 LTR MaLR 0 450 392 3541 118 37 2 chr2 197508191 197508726 -55747857 + MER41C LTR ERV1 1 554 0 4303 129 122 33 chr2 197508806 197509635 -55746948 + MER4D LTR ERV1 1 903 0 4171 147 44 9 chr2 197509707 197510393 -55746190 + MER50 LTR ERV1 1 710 -24 535 317 61 13 chr2 197510433 197510663 -55745920 - MLT1J2 LTR MaLR -205 245 5 5075 97 8 11 chr2 197510861 197511612 -55744971 + L1MA1 LINE L1 5304 6052 -250 650 160 50 4 chr2 197511623 197511745 -55744838 - L1P3 LINE L1 -5885 1699 483 606 172 0 0 chr2 197511743 197511830 -55744753 + L1PA12 LINE L1 1232 1318 -6263 * 2339 143 5 8 chr2 197513160 197513994 -55742589 + L1PA12 LINE L1 1304 3063 -4511 * 13418 173 11 6 chr2 197513962 197516479 -55740104 + L1PA12 LINE L1 3317 5846 -1738 3702 94 41 28 chr2 197516467 197517151 -55739432 + L1PA10 LINE L1 5373 6168 0 * 1488 129 4 0 chr2 197517151 197517384 -55739199 + L1PA13 LINE L1 5923 6156 -7 1804 82 4 0 chr2 197517414 197517670 -55738913 + L1MA1 LINE L1 6044 6300 -2 183 333 0 0 chr2 197518039 197518099 -55738484 - MIR SINE MIR -8 254 195 272 283 0 0 chr2 197518107 197518160 -55738423 - MIR SINE MIR -198 64 12 207 0 0 0 chr2 197518642 197518665 -55737918 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 42020 55 3 2 chr2 197519821 197525955 -55730628 + L1PA5 LINE L1 12 6150 -4 26 0 0 0 chr2 197525955 197525981 -55730602 + AT_rich Low_complexity Low_complexity 1 26 0 312 70 0 0 chr2 197526108 197526151 -55730432 + (CA)n Simple_repeat Simple_repeat 2 44 0 2288 116 0 0 chr2 197526445 197526755 -55729828 + AluSx SINE Alu 1 310 -2 23 33 0 0 chr2 197526903 197526933 -55729650 + AT_rich Low_complexity Low_complexity 1 30 0 1385 168 70 56 chr2 197527043 197527328 -55729255 + AluJo SINE Alu 1 289 -23 2182 129 0 0 chr2 197527509 197527845 -55728738 + AluSx SINE Alu 1 312 0 293 279 14 27 chr2 197528100 197528247 -55728336 + GA-rich Low_complexity Low_complexity 2 146 0 190 310 40 40 chr2 197528874 197528974 -55727609 - MIR SINE MIR 0 262 163 3707 149 49 14 chr2 197529660 197530356 -55726227 + L1MA9 LINE L1 5593 6312 0 304 267 62 79 chr2 197530688 197530928 -55725655 + L1ME2 LINE L1 229 464 -5959 569 285 17 44 chr2 197531461 197531953 -55724630 + L1ME2 LINE L1 1162 1817 -4899 275 192 0 19 chr2 197531953 197531969 -55724614 + AluJo SINE Alu 118 133 -169 748 176 15 0 chr2 197531969 197532100 -55724483 + FLAM_C SINE Alu 1 133 0 275 192 0 19 chr2 197532100 197532135 -55724448 + AluJo SINE Alu 133 168 -134 * 1802 119 115 26 chr2 197532131 197532443 -55724140 + THE1B LTR MaLR 25 364 0 1758 66 0 0 chr2 197532473 197532686 -55723897 + AluY SINE Alu 85 297 -14 1908 239 50 80 chr2 197532763 197533150 -55723433 + L1ME2 LINE L1 3172 3569 -3372 2155 122 51 25 chr2 197533150 197533503 -55723080 + THE1B LTR MaLR 3 364 0 1908 239 50 80 chr2 197533503 197534241 -55722342 + L1ME2 LINE L1 3569 4263 -2678 1972 174 32 5 chr2 197534241 197534621 -55721962 + MLT1B LTR MaLR 1 390 0 2685 274 52 15 chr2 197534717 197535934 -55720649 + L1ME2 LINE L1 4665 5926 -1015 1504 167 65 19 chr2 197535961 197536648 -55719935 + L1MB7 LINE L1 5397 6165 -19 2637 228 69 10 chr2 197536656 197537551 -55719032 + L1ME2 LINE L1 5970 6917 -42 2815 7 0 0 chr2 197537896 197538202 -55718381 - AluYa5 SINE Alu -5 306 1 23 0 0 0 chr2 197538208 197538231 -55718352 + AT_rich Low_complexity Low_complexity 1 23 0 222 219 0 42 chr2 197539373 197539469 -55717114 + (TTATA)n Simple_repeat Simple_repeat 1 92 0 296 294 40 73 chr2 197539736 197539792 -55716791 + Charlie8 DNA MER1_type 33 89 -252 2046 138 3 3 chr2 197539792 197540089 -55716494 + AluSx SINE Alu 4 300 -12 296 294 40 73 chr2 197540089 197540209 -55716374 + Charlie8 DNA MER1_type 89 203 -138 3263 122 27 4 chr2 197540213 197540697 -55715886 - LOR1a LTR ERV1 -2 495 1 657 167 0 0 chr2 197540697 197540799 -55715784 - LOR1a-int LTR ERV1 0 8120 8019 572 77 44 33 chr2 197540792 197540883 -55715700 - LOR1a-int LTR ERV1 -861 7259 7168 * 335 123 18 0 chr2 197540883 197540940 -55715643 - MER72 LTR ERV1 -650 72 15 1276 169 19 0 chr2 197540940 197541153 -55715430 - LOR1a-int LTR ERV1 -1075 7045 6829 1657 130 4 8 chr2 197541345 197541591 -55714992 - LTR49-int LTR ERV1 -4097 4023 3779 414 204 44 26 chr2 197541581 197541694 -55714889 - LTR49-int LTR ERV1 -2186 4145 4031 * 12386 138 64 39 chr2 197541975 197543361 -55713222 - LTR49-int LTR ERV1 -4367 3753 2403 369 0 0 0 chr2 197543361 197543402 -55713181 + (CA)n Simple_repeat Simple_repeat 2 42 0 12386 138 64 39 chr2 197543402 197545358 -55711225 - LTR49-int LTR ERV1 -5717 2403 294 435 287 87 11 chr2 197545466 197545741 -55710842 + L1M4 LINE L1 3212 3507 -2639 240 243 100 14 chr2 197545893 197545963 -55710620 + L2 LINE L2 3197 3272 0 489 190 11 60 chr2 197546016 197546163 -55710420 - MLT1A1 LTR MaLR -213 152 14 2169 99 6 29 chr2 197546200 197546514 -55710069 - AluSx SINE Alu -5 307 1 2400 72 7 3 chr2 197546517 197546824 -55709759 - AluY SINE Alu -3 308 1 12512 104 23 24 chr2 197547086 197549348 -55707235 - L1P3 LINE L1 -4142 2319 5 1591 128 4 4 chr2 197549356 197549605 -55706978 + Tigger1 DNA MER2_type 1250 1498 -920 2825 153 20 15 chr2 197549605 197550154 -55706429 - L1 LINE L1 -1361 4785 4234 1263 279 75 28 chr2 197550254 197551029 -55705554 - L1MEc LINE L1 -3206 3220 2410 419 293 150 38 chr2 197551051 197551511 -55705072 - L1MEc LINE L1 -4221 2386 1846 2189 121 3 0 chr2 197551511 197551808 -55704775 - AluSx SINE Alu -14 298 1 419 293 150 38 chr2 197551808 197551927 -55704656 - L1MEc LINE L1 -4761 1846 1742 1785 180 0 3 chr2 197551973 197552256 -55704327 - AluJo SINE Alu -27 285 4 379 251 118 38 chr2 197552339 197552626 -55703957 - L1MEc LINE L1 -4926 1500 1191 8710 152 23 30 chr2 197553307 197554480 -55702103 - L1PA11 LINE L1 0 6174 4995 2000 128 3 10 chr2 197554480 197554777 -55701806 - AluSc SINE Alu -14 295 1 8710 152 23 30 chr2 197554777 197555047 -55701536 - L1PA11 LINE L1 -1179 4995 4725 254 0 0 77 chr2 197555047 197555086 -55701497 + (TATAG)n Simple_repeat Simple_repeat 5 40 0 8710 152 23 30 chr2 197555086 197556087 -55700496 - L1PA11 LINE L1 -1449 4725 3742 1643 94 0 0 chr2 197556087 197556290 -55700293 - AluSc SINE Alu -106 203 1 3812 209 20 32 chr2 197556390 197556618 -55699965 - L1 LINE L1 -3152 4413 4184 2468 94 31 0 chr2 197556618 197556969 -55699614 - L1PA10 LINE L1 0 6168 5807 3812 209 20 32 chr2 197556969 197558087 -55698496 - L1 LINE L1 -3381 4184 3077 23 33 0 0 chr2 197558577 197558607 -55697976 + AT_rich Low_complexity Low_complexity 1 30 0 415 320 78 13 chr2 197558773 197559079 -55697504 + L1M4 LINE L1 3174 3499 -2647 628 265 37 59 chr2 197559099 197559560 -55697023 - L1M4 LINE L1 -1939 4207 3757 1976 265 95 6 chr2 197559740 197560404 -55696179 + MER69B DNA AcHobo 240 962 -264 2085 122 10 0 chr2 197560406 197560700 -55695883 + AluSx SINE Alu 1 297 -15 707 132 80 27 chr2 197560746 197560964 -55695619 + L1MC3 LINE L1 7393 7697 -88 684 223 127 9 chr2 197561014 197561243 -55695340 + MER69B DNA AcHobo 951 1206 -20 462 255 10 0 chr2 197561487 197561585 -55694998 + MIR SINE MIR 56 154 -108 391 269 28 0 chr2 197562117 197562225 -55694358 + MIR SINE MIR 152 262 0 1169 181 39 0 chr2 197562325 197562530 -55694053 + MER20 DNA MER1_type 1 213 -6 434 288 9 0 chr2 197563219 197563330 -55693253 - MER81 DNA DNA 0 114 3 25 65 0 0 chr2 197563830 197563876 -55692707 + AT_rich Low_complexity Low_complexity 1 46 0 1410 172 5 0 chr2 197565046 197565261 -55691322 - LOR1a-int LTR ERV1 -7903 217 2 538 194 37 9 chr2 197565262 197565370 -55691213 - LOR1a LTR ERV1 0 497 387 * 672 179 146 65 chr2 197565359 197565605 -55690978 - LOR1b LTR ERV1 -195 266 1 742 336 84 25 chr2 197565643 197566169 -55690414 - L2 LINE L2 -1007 2307 1751 281 293 41 49 chr2 197566509 197566632 -55689951 + MIR3 SINE MIR 38 159 -49 21 57 0 0 chr2 197566906 197566941 -55689642 + AT_rich Low_complexity Low_complexity 1 35 0 290 239 317 9 chr2 197566970 197567200 -55689383 - LTR50 LTR ERVL -24 771 471 238 306 114 42 chr2 197567335 197567528 -55689055 - LTR50 LTR ERVL -588 207 1 22 56 0 0 chr2 197568560 197568596 -55687987 + AT_rich Low_complexity Low_complexity 1 36 0 464 281 59 20 chr2 197568827 197568980 -55687603 + MIR3 SINE MIR 3 161 -47 275 297 76 48 chr2 197568980 197569125 -55687458 + MER117 DNA MER1_type 2 150 -47 185 397 0 0 chr2 197569293 197569356 -55687227 - MIR SINE MIR -65 143 81 225 409 75 0 chr2 197570356 197570515 -55686068 - L2 LINE L2 0 3272 3102 303 334 60 20 chr2 197571555 197571857 -55684726 + L1MC4a LINE L1 5582 5895 -1913 22767 83 11 1 chr2 197572139 197576104 -55680479 - L1PA7 LINE L1 0 6154 2157 381 190 20 50 chr2 197576410 197576510 -55680073 - MIR SINE MIR 0 262 166 302 299 133 49 chr2 197576631 197576806 -55679777 + MIR SINE MIR 3 191 -71 274 236 55 8 chr2 197576981 197577108 -55679475 + (CA)n Simple_repeat Simple_repeat 2 134 0 2575 154 22 0 chr2 197577335 197577750 -55678833 + MSTB LTR MaLR 1 424 -2 4643 203 12 0 chr2 197577752 197578599 -55677984 + MSTB-int LTR MaLR 1 857 -794 198 288 30 15 chr2 197579752 197579818 -55676765 - L2 LINE L2 -5 3308 3242 22 35 0 0 chr2 197580583 197580612 -55675971 + AT_rich Low_complexity Low_complexity 1 29 0 2266 108 0 7 chr2 197581452 197581758 -55674825 - AluSg SINE Alu -6 304 1 22 56 0 0 chr2 197582165 197582201 -55674382 + AT_rich Low_complexity Low_complexity 1 36 0 28 48 0 0 chr2 197582565 197582607 -55673976 + AT_rich Low_complexity Low_complexity 1 42 0 25 0 0 0 chr2 197583394 197583419 -55673164 + AT_rich Low_complexity Low_complexity 1 25 0 295 287 81 107 chr2 197583464 197583992 -55672591 + L2 LINE L2 2757 3272 0 2527 59 0 0 chr2 197584884 197585191 -55671392 + AluY SINE Alu 1 307 -4 361 309 56 0 chr2 197586087 197586213 -55670370 - MIR SINE MIR -110 152 20 25 0 0 0 chr2 197586470 197586495 -55670088 + AT_rich Low_complexity Low_complexity 1 25 0 213 229 9 57 chr2 197586811 197586916 -55669667 + A-rich Low_complexity Low_complexity 1 100 0 26 0 0 0 chr2 197587073 197587099 -55669484 + AT_rich Low_complexity Low_complexity 1 26 0 1916 264 113 18 chr2 197587111 197588017 -55668566 + HAL1b LINE L1 349 1340 -8 744 163 0 8 chr2 197588698 197588821 -55667762 + AluJb SINE Alu 183 304 -8 21 36 0 0 chr2 197588821 197588849 -55667734 + AT_rich Low_complexity Low_complexity 1 28 0 666 249 42 42 chr2 197589032 197589245 -55667338 - LTR7 LTR ERV1 0 450 238 1626 206 40 29 chr2 197589575 197589953 -55666630 - MLT1B LTR MaLR -8 382 1 1049 161 5 9 chr2 197590055 197590273 -55666310 - L1MA4 LINE L1 0 6300 6084 3370 153 22 0 chr2 197590381 197591120 -55665463 - L1MA4 LINE L1 -482 5818 5069 332 305 109 42 chr2 197591133 197591418 -55665165 - L1M4 LINE L1 -2014 4132 3829 5695 168 27 11 chr2 197591418 197592141 -55664442 + L1PA16 LINE L1 4132 4842 -1324 2235 136 28 3 chr2 197592141 197592494 -55664089 - THE1B LTR MaLR -2 362 1 5695 168 27 11 chr2 197592494 197593777 -55662806 + L1PA16 LINE L1 4842 6166 0 456 259 0 0 chr2 197593777 197593885 -55662698 - L1M4 LINE L1 -2315 3831 3724 355 321 21 0 chr2 197593882 197594022 -55662561 + L1MC/D LINE L1 5585 5727 -2081 * 1489 206 0 0 chr2 197594119 197594372 -55662211 - AluJb SINE Alu -59 253 1 459 360 86 16 chr2 197594495 197594993 -55661590 - L2 LINE L2 -174 3139 2616 245 224 0 17 chr2 197595118 197595176 -55661407 - L2 LINE L2 0 3272 3216 1121 226 111 15 chr2 197600612 197600953 -55655630 + MLT1A2 LTR MaLR 1 374 0 2004 121 46 26 chr2 197601909 197602216 -55654367 + AluSq SINE Alu 1 313 0 2537 204 6 58 chr2 197602483 197603018 -55653565 + MLT2B3 LTR ERVL 46 552 -2 374 298 74 8 chr2 197603018 197603128 -55653455 - MLT1E1 LTR MaLR -536 118 1 673 135 9 0 chr2 197603128 197603239 -55653344 - L1ME2 LINE L1 -312 5852 5741 621 310 76 5 chr2 197603246 197603443 -55653140 + MIR SINE MIR 52 262 0 2012 141 7 0 chr2 197603548 197603846 -55652737 - AluSx SINE Alu -12 300 1 27 29 0 0 chr2 197606901 197606935 -55649648 + AT_rich Low_complexity Low_complexity 1 34 0 848 228 0 6 chr2 197607525 197607692 -55648891 - FRAM SINE Alu 0 166 1 1528 156 25 22 chr2 197608618 197608893 -55647690 + AluJo SINE Alu 16 291 -21 27 49 0 0 chr2 197609214 197609255 -55647328 + AT_rich Low_complexity Low_complexity 1 41 0 186 376 122 15 chr2 197611331 197611536 -55645047 - L2 LINE L2 -343 2971 2745 2378 84 0 0 chr2 197612100 197612408 -55644175 - AluSx SINE Alu -4 308 1 1995 118 26 20 chr2 197612790 197613096 -55643487 + AluSx SINE Alu 1 308 -4 369 263 135 57 chr2 197613359 197613854 -55642729 - L1M4 LINE L1 -3040 3106 2573 2274 81 7 3 chr2 197613981 197614276 -55642307 - AluY SINE Alu -15 296 1 5672 29 0 0 chr2 197614374 197615038 -55641545 + L1PA4 LINE L1 5489 6152 -3 331 315 100 57 chr2 197615167 197615697 -55640886 - L1M4 LINE L1 -812 5334 4782 325 288 40 40 chr2 197615718 197615940 -55640643 - L1M4 LINE L1 -1407 4739 4518 1018 149 69 164 chr2 197615946 197616114 -55640469 - L1MA4A LINE L1 -334 5969 5797 227 179 18 0 chr2 197616114 197616170 -55640413 + LTR66 LTR ERVL 383 439 -171 1018 149 69 164 chr2 197616170 197616299 -55640284 - L1MA4A LINE L1 -506 5797 5657 1221 325 69 19 chr2 197616624 197617274 -55639309 - ERVL LTR ERVL -3402 2362 1680 1512 186 29 29 chr2 197617826 197618138 -55638445 + AluJo SINE Alu 1 312 0 921 106 17 17 chr2 197618138 197618317 -55638266 + (GGAGA)n Simple_repeat Simple_repeat 2 180 0 445 103 13 13 chr2 197618357 197618435 -55638148 + (GGAA)n Simple_repeat Simple_repeat 3 80 0 32 43 0 0 chr2 197618918 197618964 -55637619 + AT_rich Low_complexity Low_complexity 1 46 0 24 0 0 0 chr2 197619351 197619375 -55637208 + AT_rich Low_complexity Low_complexity 1 24 0 2014 276 14 43 chr2 197619585 197620778 -55635805 + L1MA8 LINE L1 7 2292 -4745 * 10063 186 58 28 chr2 197620775 197621059 -55635524 + L1MA8 LINE L1 3502 3776 -3330 2414 97 6 0 chr2 197621059 197621370 -55635213 + AluSp SINE Alu 1 313 0 10063 186 58 28 chr2 197621370 197623455 -55633128 + L1MA8 LINE L1 3776 5943 -1163 2827 129 27 20 chr2 197623443 197623931 -55632652 + L1MA8 LINE L1 6381 6871 -389 * 2426 154 33 2 chr2 197623931 197624337 -55632246 + MSTA LTR MaLR 1 356 -8 1462 134 9 0 chr2 197624337 197624568 -55632015 + MSTA-int LTR MaLR 3 235 -1416 374 82 82 16 chr2 197624570 197624631 -55631952 + MER4A LTR ERV1 34 98 -566 1606 129 190 77 chr2 197624631 197624994 -55631589 + MER4A LTR ERV1 261 664 0 7562 162 19 69 chr2 197624994 197626472 -55630111 + MSTA-int LTR MaLR 246 1649 -2 2187 149 66 17 chr2 197626479 197626654 -55629929 + MSTA LTR MaLR 1 166 -262 2248 121 0 0 chr2 197626654 197626951 -55629632 + AluSg SINE Alu 1 297 -13 2187 149 66 17 chr2 197626951 197627183 -55629400 + MSTA LTR MaLR 166 428 0 1593 191 11 29 chr2 197627183 197627565 -55629018 + L1MA8 LINE L1 6867 7241 -10 37113 79 10 7 chr2 197628696 197634482 -55622101 + L1PA5 LINE L1 179 5980 -174 1595 40 0 0 chr2 197634479 197634681 -55621902 + L1PA5 LINE L1 5019 5220 -926 * 1415 46 0 0 chr2 197634681 197634854 -55621729 + L1PA5 LINE L1 5981 6154 0 3412 98 6 10 chr2 197634854 197635349 -55621234 + L1PA11 LINE L1 5677 6172 -2 700 195 156 0 chr2 197635613 197635767 -55620816 - MER5A DNA MER1_type -1 188 11 50 0 0 0 chr2 197636289 197636339 -55620244 + AT_rich Low_complexity Low_complexity 1 50 0 2604 210 140 18 chr2 197636340 197637120 -55619463 + L1ME1 LINE L1 5274 6148 -18 965 285 108 15 chr2 197637120 197637670 -55618913 + L2 LINE L2 2699 3311 -2 235 307 20 40 chr2 197637812 197637913 -55618670 + MLT1J LTR MaLR 333 431 -80 1892 152 71 0 chr2 197638568 197638891 -55617692 - MER7A DNA MER2_type -1 345 2 577 225 90 54 chr2 197640414 197640636 -55615947 + MIR SINE MIR 33 262 0 2005 134 13 0 chr2 197640756 197641063 -55615520 - AluSx SINE Alu -1 311 1 389 332 126 62 chr2 197641334 197641756 -55614827 - L2 LINE L2 -11 3261 2813 237 351 62 31 chr2 197642062 197642287 -55614296 - L2 LINE L2 -567 2747 2516 335 292 60 36 chr2 197642288 197642456 -55614127 - L2 LINE L2 -943 2371 2200 385 250 144 75 chr2 197643394 197643582 -55613001 - MIR SINE MIR -13 249 49 241 283 35 121 chr2 197643617 197643815 -55612768 - L2 LINE L2 -86 3186 3006 1331 190 82 7 chr2 197643820 197644125 -55612458 + L1MD3 LINE L1 7658 7985 -10 414 209 38 19 chr2 197644819 197644924 -55611659 - HsTC2 DNA Tc2 -1788 110 4 2714 177 60 2 chr2 197644970 197645489 -55611094 - MER44D DNA MER2_type 0 605 2 2100 113 47 3 chr2 197646176 197646477 -55610106 + THE1B LTR MaLR 1 314 -50 525 132 44 11 chr2 197646531 197646622 -55609961 + AluSq/x SINE Alu 14 107 -206 259 111 0 0 chr2 197646623 197646659 -55609924 + THE1B LTR MaLR 320 355 0 294 308 75 0 chr2 197647054 197647187 -55609396 + MER103 DNA DNA 15 157 -9 320 192 101 40 chr2 197648351 197648450 -55608133 + MER5C DNA MER1_type 3 107 -217 245 152 0 0 chr2 197648474 197648520 -55608063 + MER5C DNA MER1_type 226 271 -53 207 88 0 0 chr2 197648659 197648693 -55607890 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1291 127 201 18 chr2 197648699 197648928 -55607655 - AluSx SINE Alu -36 276 6 400 288 49 26 chr2 197649495 197649762 -55606821 + L1MC/D LINE L1 5258 5530 -2278 550 248 7 36 chr2 197649961 197650098 -55606485 - L2 LINE L2 -8 3305 3173 2280 72 27 10 chr2 197650594 197650887 -55605696 + AluY SINE Alu 1 298 -13 917 183 35 45 chr2 197651194 197651396 -55605187 + AluJo SINE Alu 1 200 -112 277 288 32 40 chr2 197651404 197651529 -55605054 + MARNA DNA Mariner 411 534 -52 269 326 31 0 chr2 197651568 197651666 -55604917 - MER5A DNA MER1_type -50 139 39 248 271 14 14 chr2 197651764 197651834 -55604749 - MER5B DNA MER1_type -3 175 106 210 266 294 11 chr2 197652281 197652458 -55604125 - L2 LINE L2 -6 3307 3081 296 287 148 0 chr2 197652473 197652595 -55603988 - L2 LINE L2 -417 2897 2758 2173 57 0 8 chr2 197652836 197653100 -55603483 - AluY SINE Alu -10 301 40 2089 122 14 0 chr2 197653279 197653574 -55603009 + AluSx SINE Alu 1 299 -13 288 141 127 14 chr2 197654049 197654120 -55602463 - L1ME4a LINE L1 -25 6096 6018 355 247 0 0 chr2 197654480 197654557 -55602026 + L1ME2 LINE L1 5395 5471 -699 1276 220 97 33 chr2 197654564 197655040 -55601543 + L1ME2 LINE L1 5594 6095 -69 2364 89 3 0 chr2 197655276 197655579 -55601004 + AluSq SINE Alu 1 304 -9 2219 97 10 0 chr2 197656241 197656539 -55600044 - AluSx SINE Alu -11 301 1 429 340 118 0 chr2 197658049 197658252 -55598331 - MIR SINE MIR -24 238 12 2023 125 3 7 chr2 197658827 197659122 -55597461 - AluJb SINE Alu -18 294 1 265 196 20 0 chr2 197659637 197659688 -55596895 + MER3 DNA MER1_type 158 209 0 880 273 160 20 chr2 197659698 197660442 -55596141 - L1M4 LINE L1 -1576 4570 3723 27 0 0 0 chr2 197660456 197660483 -55596100 + AT_rich Low_complexity Low_complexity 1 27 0 251 183 0 50 chr2 197660492 197660552 -55596031 - L1M4 LINE L1 -2582 3564 3508 1134 104 186 0 chr2 197661771 197661964 -55594619 + MER30 DNA MER1_type 1 229 -1 194 342 81 27 chr2 197663762 197663873 -55592710 - MIR SINE MIR -64 144 28 432 307 86 0 chr2 197663982 197664145 -55592438 - MIR SINE MIR -1 261 85 218 231 15 15 chr2 197665274 197665339 -55591244 + T-rich Low_complexity Low_complexity 2 66 0 1754 116 35 67 chr2 197665370 197665716 -55590867 - MER44D DNA MER2_type -1 608 4 6955 104 3 5 chr2 197667001 197667969 -55588614 + THE1B-int LTR MaLR 615 1580 0 1846 129 111 21 chr2 197667969 197668303 -55588280 + THE1B LTR MaLR 1 364 0 1279 176 23 11 chr2 197668303 197668564 -55588019 + L1MD2 LINE L1 6084 6347 -12 1847 122 0 0 chr2 197670105 197670350 -55586233 - AluSx SINE Alu -15 297 53 246 332 156 18 chr2 197671629 197671851 -55584732 + L2 LINE L2 2786 3035 -237 193 326 0 0 chr2 197671989 197672035 -55584548 + L2 LINE L2 3140 3185 -87 210 323 89 13 chr2 197674260 197674357 -55582226 - MIR SINE MIR -43 165 62 230 118 0 0 chr2 197674516 197674550 -55582033 + L1P5 LINE L1 5695 5728 -423 419 351 78 16 chr2 197674584 197674829 -55581754 - L2 LINE L2 -1357 1957 1698 32 75 0 0 chr2 197676213 197676280 -55580303 + AT_rich Low_complexity Low_complexity 1 67 0 2334 81 16 0 chr2 197677978 197678286 -55578297 + AluSq SINE Alu 1 313 0 2074 88 7 10 chr2 197678436 197678730 -55577853 + AluY SINE Alu 1 293 -18 318 106 0 0 chr2 197678932 197678979 -55577604 + (A)n Simple_repeat Simple_repeat 1 47 0 297 243 41 12 chr2 197679499 197679606 -55576977 - MIR SINE MIR -65 143 37 682 266 53 14 chr2 197679649 197679856 -55576727 - MIR SINE MIR -40 222 8 402 271 37 0 chr2 197680271 197680378 -55576205 - L3 LINE CR1 -148 1429 1319 304 391 38 5 chr2 197680652 197680864 -55575719 - L3 LINE CR1 -772 805 587 358 314 97 29 chr2 197681509 197681684 -55574899 + MIR3 SINE MIR 15 201 -7 2111 99 44 0 chr2 197681735 197682028 -55574555 + AluSx SINE Alu 1 306 -6 312 270 0 0 chr2 197682173 197682247 -55574336 - MER5B DNA MER1_type 0 178 105 1601 143 91 43 chr2 197682247 197682597 -55573986 - THE1C LTR MaLR 0 375 9 237 262 0 83 chr2 197682598 197682682 -55573901 - MER5B DNA MER1_type -68 110 34 669 259 36 0 chr2 197682704 197682870 -55573713 - MER5B DNA MER1_type -5 173 2 2271 96 0 7 chr2 197683752 197684053 -55572530 - AluSc SINE Alu -10 299 1 1268 39 0 0 chr2 197684115 197684270 -55572313 - L1P LINE L1 -5991 155 1 560 206 50 21 chr2 197684486 197684627 -55571956 + MER69 DNA AcHobo 1 145 -1081 338 125 114 0 chr2 197684625 197684713 -55571870 + MER69 DNA AcHobo 2378 2475 -51 * 21 0 0 0 chr2 197686223 197686244 -55570339 + AT_rich Low_complexity Low_complexity 1 21 0 474 297 17 76 chr2 197687336 197687422 -55569161 - L2 LINE L2 0 3313 3223 1695 208 35 30 chr2 197687422 197687816 -55568767 + MSTD LTR MaLR 1 396 0 474 297 17 76 chr2 197687816 197688055 -55568528 - L2 LINE L2 -90 3223 2730 1347 95 6 0 chr2 197688063 197688242 -55568341 - AluSg/x SINE Alu -13 299 120 1026 289 97 86 chr2 197688309 197689178 -55567405 - L2 LINE L2 -662 2652 1775 265 343 33 102 chr2 197689352 197689684 -55566899 - L2 LINE L2 -46 3226 2918 383 313 9 9 chr2 197689814 197689929 -55566654 + MIR SINE MIR 17 131 -131 298 338 38 3 chr2 197690027 197690170 -55566413 - MIR3 SINE MIR -19 189 40 1880 167 17 0 chr2 197690347 197690646 -55565937 + AluJb SINE Alu 1 304 -8 279 54 0 0 chr2 197690702 197690739 -55565844 + (TG)n Simple_repeat Simple_repeat 2 38 0 764 45 65 0 chr2 197690799 197690954 -55565629 + (TA)n Simple_repeat Simple_repeat 1 165 0 255 318 56 16 chr2 197691950 197692076 -55564507 + L2 LINE L2 3137 3267 -5 27 0 0 0 chr2 197693172 197693199 -55563384 + AT_rich Low_complexity Low_complexity 1 27 0 2512 233 117 35 chr2 197693200 197694152 -55562431 - HAL1 LINE L1 -15 2492 1463 489 331 43 36 chr2 197694182 197694460 -55562123 - L2 LINE L2 -4 3309 3030 309 250 0 38 chr2 197694440 197694520 -55562063 - L2 LINE L2 -516 2798 2722 * 914 244 115 11 chr2 197694538 197694896 -55561687 - HAL1 LINE L1 -1245 1262 943 1381 142 263 9 chr2 197694896 197695069 -55561514 - Tigger2a DNA MER2_type -2274 434 306 2116 123 7 13 chr2 197695069 197695378 -55561205 + AluSx SINE Alu 1 307 -5 1381 142 263 9 chr2 197695378 197695550 -55561033 - Tigger2a DNA MER2_type -2402 306 1 914 244 115 11 chr2 197695550 197695649 -55560934 - HAL1 LINE L1 -1564 943 601 1201 278 49 14 chr2 197695747 197696114 -55560469 - HAL1 LINE L1 -2114 393 14 380 255 0 43 chr2 197696150 197696244 -55560339 + MIR3 SINE MIR 114 203 -5 571 224 52 52 chr2 197697855 197698087 -55558496 + MER46C DNA MER2_type 13 244 -94 1455 217 34 12 chr2 197698337 197698664 -55557919 + MLT1A1 LTR MaLR 1 334 -31 783 192 20 7 chr2 197698737 197698883 -55557700 - AluJo SINE Alu -119 193 46 1269 148 131 7 chr2 197698914 197699332 -55557251 - L1MB8 LINE L1 -16 6162 5546 232 158 70 0 chr2 197699342 197699399 -55557184 - L1M4b LINE L1 -5834 1025 965 1329 154 56 25 chr2 197699466 197699752 -55556831 - L1MC1 LINE L1 -15 6318 6024 1144 112 0 27 chr2 197699752 197699939 -55556644 - L1M4b LINE L1 -5884 975 794 804 211 69 77 chr2 197699952 197700450 -55556133 - L1M4b LINE L1 -6140 719 111 1999 121 7 10 chr2 197700450 197700748 -55555835 - AluSx SINE Alu -15 297 1 804 211 69 77 chr2 197700748 197700856 -55555727 - L1M4b LINE L1 -6748 111 4 258 181 213 69 chr2 197700901 197701036 -55555547 - L1MC5 LINE L1 -464 7497 7334 1048 187 33 77 chr2 197701036 197701373 -55555210 - MER33 DNA MER1_type -1 323 2 258 181 213 69 chr2 197701373 197701397 -55555186 - L1MC5 LINE L1 -627 7334 7315 21 57 0 0 chr2 197701490 197701525 -55555058 + AT_rich Low_complexity Low_complexity 1 35 0 255 261 46 24 chr2 197702155 197702268 -55554315 - MIR SINE MIR -61 147 34 285 277 20 40 chr2 197702393 197702494 -55554089 + MIR SINE MIR 45 143 -65 378 223 160 0 chr2 197703241 197703335 -55553248 + MIR3 SINE MIR 89 197 -11 346 284 124 35 chr2 197703808 197703977 -55552606 + MIR3 SINE MIR 18 201 -7 317 243 59 37 chr2 197705051 197705187 -55551396 + MIR3 SINE MIR 61 199 -9 443 311 94 17 chr2 197705498 197705733 -55550850 - MIR SINE MIR 0 262 10 617 177 61 173 chr2 197706398 197706655 -55549928 + LTR68 LTR ERV1 329 613 -127 239 0 32 0 chr2 197706655 197706686 -55549897 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2217 96 7 0 chr2 197706688 197706979 -55549604 - AluSg SINE Alu -12 298 6 617 177 61 173 chr2 197706979 197707109 -55549474 + LTR68 LTR ERV1 614 740 0 210 376 50 0 chr2 197707558 197707659 -55548924 - MIR SINE MIR -144 118 13 308 24 24 0 chr2 197708967 197709008 -55547575 + (TTTTC)n Simple_repeat Simple_repeat 4 45 0 1940 167 3 3 chr2 197709018 197709330 -55547253 - AluJb SINE Alu 0 312 1 4553 110 58 34 chr2 197710477 197711220 -55545363 + Tigger3b DNA MER2_type 179 903 -2125 368 40 20 0 chr2 197711220 197711270 -55545313 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 1542 134 19 63 chr2 197711270 197711533 -55545050 - AluJb SINE Alu -27 285 35 2081 111 4 0 chr2 197711540 197711820 -55544763 + AluSp SINE Alu 1 281 -32 198 0 0 0 chr2 197711822 197711844 -55544739 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 4553 110 58 34 chr2 197711844 197711997 -55544586 + Tigger3b DNA MER2_type 908 1102 -129 940 173 6 6 chr2 197711997 197712176 -55544407 - Tigger1 DNA MER2_type 0 2418 2240 1177 138 45 97 chr2 197712182 197712451 -55544132 - Tigger1 DNA MER2_type -2068 350 96 1903 164 0 17 chr2 197712805 197713104 -55543479 - AluJb SINE Alu -18 294 1 227 277 25 50 chr2 197713240 197713359 -55543224 - MLT1H LTR MaLR -387 162 47 1139 61 0 0 chr2 197713771 197713903 -55542680 - AluY SINE Alu -179 132 1 2034 148 0 3 chr2 197713977 197714280 -55542303 + AluSx SINE Alu 1 302 -10 1864 214 75 62 chr2 197714420 197714953 -55541630 + MLT1F LTR MaLR 2 541 -1 320 315 8 8 chr2 197715655 197715785 -55540798 + L1P LINE L1 3625 3754 -2392 836 273 83 60 chr2 197716023 197716503 -55540080 - L2 LINE L2 -1228 2086 1596 660 304 195 11 chr2 197716504 197716873 -55539710 + L2 LINE L2 1079 1515 -1799 2214 154 5 16 chr2 197717103 197717480 -55539103 + THE1C LTR MaLR 3 375 0 1648 92 12 0 chr2 197717480 197717730 -55538853 + THE1C-int LTR MaLR 1 253 -1327 610 105 53 18 chr2 197717726 197717840 -55538743 + THE1C-int LTR MaLR 1463 1580 0 * 1632 173 101 20 chr2 197717840 197718187 -55538396 + THE1C LTR MaLR 1 375 0 38 39 0 0 chr2 197719206 197719258 -55537325 + AT_rich Low_complexity Low_complexity 1 52 0 2251 109 7 0 chr2 197719267 197719561 -55537022 + AluSq SINE Alu 1 296 -17 445 274 108 24 chr2 197719576 197719788 -55536795 - L1ME4a LINE L1 -256 5865 5636 2220 88 7 0 chr2 197720611 197720905 -55535678 + AluSq SINE Alu 1 296 -17 219 36 0 0 chr2 197720957 197720985 -55535598 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 219 100 0 0 chr2 197721215 197721245 -55535338 - MIR3 SINE MIR -24 184 155 191 296 0 0 chr2 197721323 197721377 -55535206 - MIR SINE MIR -57 151 98 736 190 7 0 chr2 197721636 197721773 -55534810 - FLAM_C SINE Alu -5 138 1 2039 79 29 7 chr2 197725276 197725556 -55531027 - AluSg SINE Alu -19 291 6 428 276 37 16 chr2 197726535 197726724 -55529859 + MIR SINE MIR 10 204 -58 2055 121 0 7 chr2 197726831 197727153 -55529430 + AluSx SINE Alu 1 312 0 512 317 35 102 chr2 197727342 197727736 -55528847 - L2 LINE L2 -49 3223 2856 354 219 82 55 chr2 197728082 197728228 -55528355 - L2 LINE L2 -1344 1970 1821 942 132 0 14 chr2 197729438 197729582 -55527001 + FLAM_C SINE Alu 1 142 -1 857 96 32 8 chr2 197729633 197729758 -55526825 + FRAM SINE Alu 18 145 -31 3254 161 75 36 chr2 197729793 197729919 -55526664 + L1MD2 LINE L1 5324 5444 -915 1745 158 18 4 chr2 197729919 197730198 -55526385 + AluJb SINE Alu 9 291 -21 3254 161 75 36 chr2 197730198 197730807 -55525776 + L1MD2 LINE L1 5444 6091 -268 2219 119 22 35 chr2 197730807 197731176 -55525407 + THE1B LTR MaLR 1 364 0 4430 86 16 25 chr2 197731176 197731848 -55524735 + THE1B-int LTR MaLR 1 666 -914 850 43 62 0 chr2 197731980 197732194 -55524389 + (TA)n Simple_repeat Simple_repeat 1 227 0 183 361 190 6 chr2 197732237 197732395 -55524188 + MIR SINE MIR 58 244 -18 397 293 155 17 chr2 197734505 197734686 -55521897 - L3 LINE CR1 -469 1108 903 623 193 43 29 chr2 197734694 197734834 -55521749 - L2 LINE L2 0 3313 3172 1173 285 118 7 chr2 197735009 197735372 -55521211 + L2 LINE L2 116 540 -2774 441 0 0 0 chr2 197735372 197735421 -55521162 + (CA)n Simple_repeat Simple_repeat 2 50 0 1173 285 118 7 chr2 197735421 197735506 -55521077 + L2 LINE L2 540 614 -2700 632 261 169 38 chr2 197735489 197735750 -55520833 + L2 LINE L2 1324 1618 -1696 * 455 330 80 10 chr2 197735866 197736066 -55520517 + MIR SINE MIR 43 256 -6 24 32 0 0 chr2 197736403 197736434 -55520149 + AT_rich Low_complexity Low_complexity 1 31 0 23 92 0 0 chr2 197736696 197736761 -55519822 + AT_rich Low_complexity Low_complexity 1 65 0 463 268 8 41 chr2 197736827 197736950 -55519633 + L2 LINE L2 3195 3313 0 383 176 15 0 chr2 197737726 197737794 -55518789 + Tigger2 DNA MER2_type 1 69 -2649 * 2630 127 35 2 chr2 197737792 197738217 -55518366 + Tigger2 DNA MER2_type 2280 2718 0 21 0 0 0 chr2 197738253 197738274 -55518309 + AT_rich Low_complexity Low_complexity 1 21 0 2405 88 0 0 chr2 197738852 197739149 -55517434 + AluY SINE Alu 1 297 -14 182 219 109 62 chr2 197740638 197740702 -55515881 - L2 LINE L2 -20 3252 3186 * 194 298 70 0 chr2 197740671 197740728 -55515855 - L2 LINE L2 -56 3257 3197 2146 184 33 47 chr2 197742226 197742738 -55513845 + MLT1D LTR MaLR 1 505 0 2407 93 0 0 chr2 197744135 197744448 -55512135 - AluSq SINE Alu 0 313 1 1072 168 103 0 chr2 197744555 197744769 -55511814 - MLT1C LTR MaLR 0 467 232 2439 93 62 6 chr2 197745494 197745849 -55510734 - THE1C LTR MaLR 0 375 1 291 54 0 0 chr2 197745882 197745919 -55510664 + (TTTTC)n Simple_repeat Simple_repeat 3 39 0 189 326 21 42 chr2 197746029 197746124 -55510459 + L2 LINE L2 3163 3255 -17 205 321 83 0 chr2 197746163 197746247 -55510336 + L2 LINE L2 3160 3250 -63 489 351 30 5 chr2 197747308 197747510 -55509073 + MIR SINE MIR 7 213 -49 201 74 0 0 chr2 197747594 197747621 -55508962 + (T)n Simple_repeat Simple_repeat 1 27 0 674 138 39 0 chr2 197747649 197747779 -55508804 - L1MB7 LINE L1 0 6184 6050 22 70 0 0 chr2 197747779 197747822 -55508761 + AT_rich Low_complexity Low_complexity 1 43 0 23 0 0 0 chr2 197748119 197748142 -55508441 + AT_rich Low_complexity Low_complexity 1 23 0 407 292 79 35 chr2 197749057 197749223 -55507360 + L1MC4a LINE L1 4490 4668 -1478 2224 106 0 0 chr2 197749223 197749525 -55507058 + AluSx SINE Alu 1 302 -10 407 292 79 35 chr2 197749525 197749560 -55507023 + L1MC4a LINE L1 4668 4700 -1446 596 290 173 5 chr2 197749684 197749898 -55506685 - MIR SINE MIR -4 258 9 729 308 130 14 chr2 197750312 197750803 -55505780 + L1MC4a LINE L1 5381 5928 -1880 290 246 51 25 chr2 197750831 197750949 -55505634 + HAL1b LINE L1 1210 1330 -18 183 42 0 0 chr2 197750949 197750973 -55505610 + (A)n Simple_repeat Simple_repeat 1 24 0 195 280 20 0 chr2 197751184 197751234 -55505349 + L2 LINE L2 3242 3292 -21 261 262 48 48 chr2 197753224 197753369 -55503214 - HAL1b LINE L1 -437 911 767 1211 184 56 49 chr2 197753446 197753734 -55502849 - AluJo SINE Alu -21 291 2 2101 136 7 7 chr2 197754048 197754356 -55502227 + AluSx SINE Alu 3 310 -2 358 284 159 37 chr2 197754594 197755002 -55501581 - HAL1 LINE L1 -1241 1266 809 2319 79 0 3 chr2 197755487 197755779 -55500804 - AluSg SINE Alu -15 295 5 287 339 109 6 chr2 197755925 197756099 -55500484 + MIR SINE MIR 5 196 -66 22 56 0 0 chr2 197757027 197757063 -55499520 + AT_rich Low_complexity Low_complexity 1 36 0 943 256 98 37 chr2 197757744 197757821 -55498762 + Charlie8 DNA MER1_type 35 106 -2311 2021 119 3 0 chr2 197757821 197758134 -55498449 + AluSx SINE Alu 1 314 0 943 256 98 37 chr2 197758134 197758515 -55498068 + Charlie8 DNA MER1_type 106 523 -1894 22 70 0 0 chr2 197759746 197759789 -55496794 + AT_rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr2 197761354 197761376 -55495207 + AT_rich Low_complexity Low_complexity 1 22 0 21 82 0 0 chr2 197762161 197762210 -55494373 + AT_rich Low_complexity Low_complexity 1 49 0 1685 137 0 4 chr2 197762213 197762462 -55494121 + AluJb SINE Alu 60 307 -5 26 74 0 0 chr2 197762565 197762619 -55493964 + AT_rich Low_complexity Low_complexity 1 54 0 2508 61 0 0 chr2 197763720 197764015 -55492568 + AluY SINE Alu 1 295 -16 445 278 59 83 chr2 197765027 197765186 -55491397 - L2 LINE L2 0 3313 3163 276 30 0 0 chr2 197765186 197765219 -55491364 + (TG)n Simple_repeat Simple_repeat 2 34 0 445 278 59 83 chr2 197765219 197765347 -55491236 - L2 LINE L2 -150 3163 3033 2467 281 149 12 chr2 197765581 197766507 -55490076 - L2 LINE L2 -1499 1815 763 457 145 172 34 chr2 197766507 197766653 -55489930 + L1MA5A LINE L1 6125 6293 -4 22 0 0 0 chr2 197767340 197767362 -55489221 + AT_rich Low_complexity Low_complexity 1 22 0 2427 65 0 3 chr2 197767368 197767662 -55488921 + AluY SINE Alu 1 293 -18 353 186 0 12 chr2 197769103 197769189 -55487394 + (TA)n Simple_repeat Simple_repeat 2 86 0 226 300 0 0 chr2 197769191 197769281 -55487302 + L1MC4 LINE L1 6614 6703 -1339 * 247 272 0 0 chr2 197769215 197769307 -55487276 - L1MC4 LINE L1 -1339 6703 6612 301 278 11 22 chr2 197770030 197770120 -55486463 + 7SK RNA RNA 8 96 -97 23 0 0 0 chr2 197770596 197770619 -55485964 + AT_rich Low_complexity Low_complexity 1 23 0 437 358 23 11 chr2 197771322 197771498 -55485085 + MIR3 SINE MIR 21 198 -10 300 289 65 58 chr2 197772711 197772909 -55483674 + MIR SINE MIR 19 216 -46 207 69 0 0 chr2 197773043 197773072 -55483511 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 244 387 36 63 chr2 197773077 197773299 -55483284 - L2 LINE L2 -62 3210 2995 348 265 12 0 chr2 197774934 197775017 -55481566 + MIR3 SINE MIR 122 205 -3 21 0 0 0 chr2 197775545 197775566 -55481017 + AT_rich Low_complexity Low_complexity 1 21 0 376 138 0 195 chr2 197775648 197775771 -55480812 + MER20 DNA MER1_type 1 99 -120 311 266 221 6 chr2 197776384 197776542 -55480041 - L2 LINE L2 -16 3297 3106 1905 149 24 10 chr2 197776776 197777071 -55479512 - AluJo SINE Alu -13 299 1 204 184 20 20 chr2 197777263 197777312 -55479271 + (CATATA)n Simple_repeat Simple_repeat 4 52 0 189 0 0 0 chr2 197779926 197779947 -55476636 + (CCG)n Simple_repeat Simple_repeat 1 21 0 188 269 108 0 chr2 197780577 197780670 -55475913 - MIR3 SINE MIR -3 205 103 188 303 0 66 chr2 197782467 197782543 -55474040 - L3 LINE CR1 -323 1254 1184 351 65 0 0 chr2 197782965 197783011 -55473572 + (CA)n Simple_repeat Simple_repeat 1 46 0 956 217 27 0 chr2 197783081 197783302 -55473281 + L1MB5 LINE L1 5941 6167 -7 213 344 83 32 chr2 197783581 197783738 -55472845 - L3b LINE CR1 -215 1368 1204 823 280 35 16 chr2 197784525 197784782 -55471801 - MIR SINE MIR 0 262 1 23 0 0 0 chr2 197785257 197785280 -55471303 + AT_rich Low_complexity Low_complexity 1 23 0 484 273 87 25 chr2 197785796 197785957 -55470626 + MIR3 SINE MIR 3 173 -35 2356 72 0 38 chr2 197786308 197786627 -55469956 - AluY SINE Alu -1 310 4 2115 104 7 0 chr2 197787659 197787939 -55468644 - AluSx SINE Alu -18 294 13 5871 147 36 26 chr2 197788735 197789442 -55467141 - L1MA4 LINE L1 -4 6296 5597 2227 113 131 11 chr2 197789442 197789824 -55466759 - MSTA LTR MaLR 0 428 1 5871 147 36 26 chr2 197789824 197790064 -55466519 - L1MA4 LINE L1 -703 5597 5361 2198 114 7 0 chr2 197790064 197790372 -55466211 + AluSp SINE Alu 1 310 -3 5871 147 36 26 chr2 197790372 197791525 -55465058 - L1MA4 LINE L1 -939 5361 4154 442 268 161 31 chr2 197791726 197791950 -55464633 + MIR SINE MIR 4 256 -6 411 297 0 0 chr2 197792453 197792554 -55464029 + L2 LINE L2 3172 3272 0 233 204 215 0 chr2 197792636 197792729 -55463854 - MLT1J LTR MaLR 0 511 399 310 314 20 64 chr2 197792791 197792995 -55463588 - MLT1L LTR MaLR -231 384 190 1278 155 0 10 chr2 197793089 197793296 -55463287 + AluJb SINE Alu 93 297 -15 1618 166 79 7 chr2 197793980 197794270 -55462313 + AluJo SINE Alu 1 311 -1 234 0 0 0 chr2 197794273 197794299 -55462284 + (CAA)n Simple_repeat Simple_repeat 2 27 0 21 36 0 0 chr2 197795111 197795139 -55461444 + AT_rich Low_complexity Low_complexity 1 28 0 2587 151 32 26 chr2 197795207 197795671 -55460912 + MLT1C LTR MaLR 1 467 0 294 50 0 0 chr2 197796365 197796405 -55460178 + (GA)n Simple_repeat Simple_repeat 1 40 0 405 253 11 11 chr2 197796469 197796564 -55460019 - MIR SINE MIR -56 206 112 24 32 0 0 chr2 197796770 197796801 -55459782 + AT_rich Low_complexity Low_complexity 1 31 0 596 262 8 0 chr2 197796811 197796933 -55459650 + FLAM_A SINE Alu 1 123 -10 1906 118 0 126 chr2 197797177 197797574 -55459009 - MER7A DNA MER2_type -1 345 1 2036 109 0 0 chr2 197797809 197798074 -55458509 + AluSx SINE Alu 1 265 -47 274 336 39 39 chr2 197800268 197800372 -55456211 + L2 LINE L2 3151 3254 -18 3729 31 0 0 chr2 197800949 197801393 -55455190 + L1PA4 LINE L1 5710 6153 -2 389 130 0 0 chr2 197802521 197802575 -55454008 + Alu SINE Alu 238 291 -11 25 0 0 0 chr2 197803541 197803566 -55453017 + AT_rich Low_complexity Low_complexity 1 25 0 333 47 0 0 chr2 197803746 197803789 -55452794 + (TG)n Simple_repeat Simple_repeat 2 44 0 186 103 0 0 chr2 197804357 197804386 -55452197 + (TC)n Simple_repeat Simple_repeat 2 30 0 30 0 0 0 chr2 197804635 197804665 -55451918 + AT_rich Low_complexity Low_complexity 1 30 0 260 194 10 29 chr2 197805026 197805129 -55451454 + (TA)n Simple_repeat Simple_repeat 2 102 0 225 208 0 21 chr2 197806476 197806524 -55450059 + CT-rich Low_complexity Low_complexity 3 49 0 1670 182 4 0 chr2 197806671 197806986 -55449597 - AluJo SINE Alu 0 316 1 383 279 190 13 chr2 197807153 197807311 -55449272 + MIR3 SINE MIR 12 197 -11 345 24 0 0 chr2 197808667 197808709 -55447874 + (TG)n Simple_repeat Simple_repeat 1 42 0 22 0 0 0 chr2 197809957 197809979 -55446604 + AT_rich Low_complexity Low_complexity 1 22 0 251 286 137 30 chr2 197810284 197810452 -55446131 - L3b LINE CR1 -146 1437 1252 1287 177 174 47 chr2 197810521 197810906 -55445677 - Tigger2a DNA MER2_type 0 434 1 1776 225 52 9 chr2 197811199 197811644 -55444939 - L1MCa LINE L1 -5944 482 19 475 254 31 8 chr2 197811886 197812016 -55444567 + MER94 DNA DNA 2 134 0 1250 318 193 7 chr2 197812018 197812854 -55443729 - L2 LINE L2 -407 2907 1917 819 90 149 15 chr2 197812856 197812990 -55443593 - THE1C LTR MaLR -223 152 1 2125 114 3 14 chr2 197813111 197813408 -55443175 - AluSx SINE Alu -18 294 1 213 227 0 0 chr2 197813464 197813508 -55443075 - L2 LINE L2 -1378 1936 1893 477 0 0 0 chr2 197813508 197813561 -55443022 + (TA)n Simple_repeat Simple_repeat 2 54 0 38 0 0 0 chr2 197813680 197813718 -55442865 + AT_rich Low_complexity Low_complexity 1 38 0 229 232 159 86 chr2 197814924 197815075 -55441508 - MLT1J LTR MaLR -111 400 239 1831 133 37 0 chr2 197815076 197815377 -55441206 + AluSx SINE Alu 1 311 0 192 252 17 104 chr2 197815527 197815642 -55440941 + MIR SINE MIR 101 205 -57 24 0 0 0 chr2 197816054 197816078 -55440505 + AT_rich Low_complexity Low_complexity 1 24 0 25 65 0 0 chr2 197816200 197816246 -55440337 + AT_rich Low_complexity Low_complexity 1 46 0 21 0 0 0 chr2 197816355 197816376 -55440207 + AT_rich Low_complexity Low_complexity 1 21 0 201 74 0 0 chr2 197816416 197816443 -55440140 + (A)n Simple_repeat Simple_repeat 1 27 0 186 103 0 0 chr2 197816565 197816594 -55439989 + (T)n Simple_repeat Simple_repeat 1 29 0 634 250 53 53 chr2 197816652 197816916 -55439667 + HAL1 LINE L1 32 295 -2212 328 322 8 0 chr2 197816984 197817105 -55439478 + HAL1 LINE L1 1734 1855 -652 246 254 0 0 chr2 197817160 197817215 -55439368 + Tigger7 DNA MER2_type 1 55 -2432 * 650 107 157 29 chr2 197817212 197817352 -55439231 + Tigger7 DNA MER2_type 2231 2388 -103 2073 146 9 3 chr2 197817362 197817705 -55438878 + MER47A DNA MER2_type 22 366 0 762 123 0 0 chr2 197817705 197817809 -55438774 + Tigger7 DNA MER2_type 2384 2487 0 1720 98 13 0 chr2 197817827 197818087 -55438496 + AluSc SINE Alu 44 306 0 354 221 205 6 chr2 197818101 197818282 -55438301 + HAL1b LINE L1 819 2279 -228 219 36 0 0 chr2 197819245 197819273 -55437310 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 24 0 0 0 chr2 197819383 197819407 -55437176 + AT_rich Low_complexity Low_complexity 1 24 0 22 56 0 0 chr2 197819564 197819600 -55436983 + AT_rich Low_complexity Low_complexity 1 36 0 2064 140 0 0 chr2 197820248 197820548 -55436035 - AluSx SINE Alu -11 301 2 261 213 67 13 chr2 197820757 197820832 -55435751 + MIR SINE MIR 119 197 -65 305 125 18 0 chr2 197821484 197821540 -55435043 + GA-rich Low_complexity Low_complexity 4 60 0 1229 184 104 52 chr2 197822361 197822687 -55433896 - MER2 DNA MER2_type 0 344 2 1476 164 46 21 chr2 197823290 197823570 -55433013 + AluJb SINE Alu 1 287 -25 31 0 0 0 chr2 197823570 197823601 -55432982 + AT_rich Low_complexity Low_complexity 1 31 0 390 273 149 7 chr2 197823766 197823920 -55432663 + MIR SINE MIR 81 256 -6 225 222 0 0 chr2 197824876 197824939 -55431644 + (TA)n Simple_repeat Simple_repeat 1 63 0 228 244 37 73 chr2 197825463 197825545 -55431038 - MIR SINE MIR -80 182 104 232 276 172 23 chr2 197825628 197825715 -55430868 - MER5A DNA MER1_type -56 133 34 667 216 210 3 chr2 197825874 197826079 -55430504 + MIR SINE MIR 16 262 0 22 70 0 0 chr2 197826079 197826122 -55430461 + AT_rich Low_complexity Low_complexity 1 43 0 248 273 66 50 chr2 197826159 197826280 -55430303 - LTR67 LTR ERVL 0 557 435 2929 137 15 13 chr2 197826361 197827215 -55429368 - L1 LINE L1 -3408 4157 3305 1031 151 4 0 chr2 197827640 197827951 -55428632 - ALR/Alpha Satellite centromeric 0 312 1 1007 201 31 118 chr2 197828179 197828662 -55427921 - LTR37B LTR ERV1 -4 464 24 225 0 0 0 chr2 197829743 197829768 -55426815 + (T)n Simple_repeat Simple_repeat 1 25 0 537 253 59 30 chr2 197830266 197830468 -55426115 - L2 LINE L2 0 3313 3106 420 250 0 0 chr2 197830503 197830611 -55425972 - L1 LINE L1 -3221 3627 3520 306 141 16 31 chr2 197830586 197830650 -55425933 - L1 LINE L1 -6728 121 59 * 567 270 113 17 chr2 197831152 197831382 -55425201 + MIR SINE MIR 4 255 -7 287 179 155 118 chr2 197831803 197832132 -55424451 - L1MC4 LINE L1 -5 8037 7697 205 146 21 21 chr2 197832144 197832192 -55424391 + T-rich Low_complexity Low_complexity 2 49 0 217 277 0 0 chr2 197834387 197834470 -55422113 + T-rich Low_complexity Low_complexity 1 83 0 2101 105 0 20 chr2 197834828 197835132 -55421451 + AluSg SINE Alu 1 298 -12 2279 122 0 0 chr2 197835381 197835693 -55420890 + AluSq SINE Alu 1 312 -1 514 183 19 0 chr2 197835918 197836022 -55420561 + L1MB8 LINE L1 5664 5769 -409 2136 168 23 14 chr2 197836049 197836477 -55420106 + L1MB8 LINE L1 5747 6178 0 241 269 170 0 chr2 197836566 197836707 -55419876 + L1ME4a LINE L1 5957 6121 0 332 269 28 14 chr2 197836722 197836863 -55419720 + L1ME4a LINE L1 5960 6102 -19 300 294 88 15 chr2 197837444 197837580 -55419003 + L2 LINE L2 3168 3313 0 21 0 0 0 chr2 197838150 197838171 -55418412 + AT_rich Low_complexity Low_complexity 1 21 0 1684 179 23 3 chr2 197838259 197838560 -55418023 + AluSx SINE Alu 1 307 -5 351 196 37 0 chr2 197839064 197839171 -55417412 + GA-rich Low_complexity Low_complexity 2 112 0 564 272 50 25 chr2 197839596 197839798 -55416785 - L2 LINE L2 0 3313 3107 1744 162 3 26 chr2 197840236 197840538 -55416045 - AluSx SINE Alu -17 295 1 716 322 83 42 chr2 197840677 197841199 -55415384 + L2 LINE L2 2737 3269 -3 1203 159 9 48 chr2 197841491 197841638 -55414945 + MER20 DNA MER1_type 2 138 -81 3299 138 31 6 chr2 197841638 197842151 -55414432 + MER1A DNA MER1_type 2 527 0 1203 159 9 48 chr2 197842151 197842230 -55414353 + MER20 DNA MER1_type 138 219 0 1950 128 48 23 chr2 197842932 197843284 -55413299 + MER46B DNA MER2_type 1 236 0 188 314 0 0 chr2 197843680 197843731 -55412852 + MIR SINE MIR 8 58 -204 537 297 28 19 chr2 197843734 197843903 -55412680 - MIR SINE MIR -62 146 18 390 84 90 18 chr2 197844156 197844323 -55412260 + (TA)n Simple_repeat Simple_repeat 1 179 0 265 124 45 11 chr2 197844345 197844434 -55412149 + (TA)n Simple_repeat Simple_repeat 1 92 0 2253 100 0 0 chr2 197844434 197844723 -55411860 - AluSq SINE Alu -24 289 1 756 181 40 13 chr2 197845334 197845483 -55411100 - MER20 DNA MER1_type 0 219 67 284 347 32 0 chr2 197845540 197845664 -55410919 - MIR SINE MIR -55 207 80 2230 91 7 13 chr2 197845689 197845996 -55410587 - AluSq SINE Alu -8 305 1 423 309 11 34 chr2 197847414 197847592 -55408991 + MER5A DNA MER1_type 16 189 0 2168 139 25 33 chr2 197847756 197848123 -55408460 - THE1B LTR MaLR 0 364 1 278 317 0 24 chr2 197848158 197848240 -55408343 + MIR3 SINE MIR 76 155 -53 1844 155 0 24 chr2 197848562 197848858 -55407725 - AluJo SINE Alu -23 289 1 1104 329 140 19 chr2 197849028 197849994 -55406589 - L2 LINE L2 -9 3263 2181 484 191 0 0 chr2 197850314 197850408 -55406175 - AluSg/x SINE Alu -1 308 215 1827 146 0 0 chr2 197850626 197850913 -55405670 - AluSx SINE Alu -25 287 1 361 330 0 17 chr2 197851296 197851414 -55405169 + CT-rich Low_complexity Low_complexity 1 116 0 213 300 50 0 chr2 197851524 197851604 -55404979 - MIR3 SINE MIR 0 208 125 1168 157 89 20 chr2 197851730 197852023 -55404560 + MER33 DNA MER1_type 1 313 -11 234 282 70 0 chr2 197852229 197852300 -55404283 - MIR SINE MIR -91 117 42 218 204 61 0 chr2 197852387 197852436 -55404147 - L2 LINE L2 -8 3305 3254 1896 137 0 0 chr2 197852648 197852904 -55403679 + AluSx SINE Alu 1 256 -56 31 76 0 0 chr2 197852904 197852970 -55403613 + AT_rich Low_complexity Low_complexity 1 66 0 594 288 136 57 chr2 197853389 197853955 -55402628 - L1M4 LINE L1 -2333 3813 3203 1918 156 13 10 chr2 197853962 197854269 -55402314 + AluJb SINE Alu 1 308 -4 792 270 60 40 chr2 197855534 197855786 -55400797 + MIR SINE MIR 6 262 0 2379 60 0 17 chr2 197856616 197856915 -55399668 - AluY SINE Alu -17 294 1 186 156 0 0 chr2 197857065 197857097 -55399486 - L2 LINE L2 -79 3234 3203 1058 363 31 10 chr2 197857203 197857724 -55398859 - L2 LINE L2 -685 2629 2098 510 242 0 24 chr2 197857778 197857902 -55398681 - MIR SINE MIR -110 152 32 22 0 0 0 chr2 197858107 197858129 -55398454 + AT_rich Low_complexity Low_complexity 1 22 0 399 296 34 62 chr2 197858145 197858321 -55398262 + MIR SINE MIR 63 233 -29 23 0 0 0 chr2 197858323 197858346 -55398237 + AT_rich Low_complexity Low_complexity 1 23 0 21 89 0 0 chr2 197858598 197858654 -55397929 + AT_rich Low_complexity Low_complexity 1 56 0 379 281 24 42 chr2 197858692 197858859 -55397724 - L1ME LINE L1 -303 5818 5655 266 208 9 132 chr2 197858865 197858971 -55397612 + MER63 DNA MER1_type 4 722 -114 254 211 0 0 chr2 197858976 197859028 -55397555 + LTR30 LTR ERV1 1 52 -670 1528 120 39 5 chr2 197859028 197859294 -55397289 + LTR12 LTR ERV1 57 2017 -421 315 234 0 0 chr2 197859294 197859371 -55397212 + LTR30 LTR ERV1 544 620 -102 701 194 23 0 chr2 197859371 197859500 -55397083 + LTR12 LTR ERV1 355 486 -228 2408 139 14 9 chr2 197859560 197859992 -55396591 + L1MA8 LINE L1 5855 6288 -3 5450 185 10 30 chr2 197860202 197861220 -55395363 + L1PA15-16 LINE L1 2771 3758 -3091 9284 57 6 124 chr2 197861220 197862787 -55393796 + SVA Other Other 3 1383 -3 5450 185 10 30 chr2 197862787 197863067 -55393516 + L1PA15-16 LINE L1 3758 4042 -2807 1633 203 39 48 chr2 197863069 197863502 -55393081 + MER119 DNA MER1_type 154 582 -1 650 257 50 29 chr2 197863670 197863950 -55392633 + L1MC4a LINE L1 5704 5989 -1819 30 45 0 0 chr2 197863969 197864013 -55392570 + AT_rich Low_complexity Low_complexity 1 44 0 2195 110 3 0 chr2 197864016 197864307 -55392276 + AluSx SINE Alu 1 292 -20 270 252 0 42 chr2 197864340 197864459 -55392124 + L1MCc LINE L1 25 138 -6285 335 233 10 19 chr2 197864516 197864619 -55391964 + L1MCc LINE L1 266 367 -6056 275 213 50 7 chr2 197864622 197864763 -55391820 + (TA)n Simple_repeat Simple_repeat 2 148 0 6014 58 1 1 chr2 197864785 197865546 -55391037 + L1PA7 LINE L1 5393 6153 -1 348 259 0 0 chr2 197865575 197865683 -55390900 + L1M4 LINE L1 3508 3615 -2531 1127 138 31 18 chr2 197865683 197865908 -55390675 + MER93b LTR ERV1 1 228 -145 244 164 70 26 chr2 197866174 197866293 -55390290 - MER96 DNA MER1_type? -15 160 1 1828 172 0 0 chr2 197867511 197867813 -55388770 + AluSx SINE Alu 1 302 -10 363 200 27 0 chr2 197868382 197868457 -55388126 - FRAM/FAM SINE Alu -94 81 5 599 234 68 17 chr2 197868808 197869043 -55387540 - LTR37B LTR ERV1 -6 462 216 319 155 202 0 chr2 197869236 197869320 -55387263 + MER53 DNA DNA 88 188 -1 259 350 172 23 chr2 197870194 197870497 -55386086 + L2 LINE L2 2380 2727 -587 247 286 31 41 chr2 197870614 197870712 -55385871 + MIR SINE MIR 48 144 -64 1143 111 6 6 chr2 197871101 197871263 -55385320 + AluJb SINE Alu 142 303 -9 2342 93 3 10 chr2 197871533 197871846 -55384737 - AluSp SINE Alu -2 311 1 1153 103 61 0 chr2 197872892 197873057 -55383526 + AluSg/x SINE Alu 123 297 -13 571 281 22 18 chr2 197873067 197873336 -55383247 + L1M4 LINE L1 5549 5812 -335 525 32 0 0 chr2 197873878 197873941 -55382642 + (TA)n Simple_repeat Simple_repeat 1 63 0 209 267 23 27 chr2 197874016 197874143 -55382440 + MIR SINE MIR 68 248 -14 1855 133 28 7 chr2 197876526 197876812 -55379771 + AluSx SINE Alu 1 292 -20 210 71 0 0 chr2 197877418 197877446 -55379137 + (TC)n Simple_repeat Simple_repeat 2 29 0 983 175 0 6 chr2 197878394 197878554 -55378029 + AluJb SINE Alu 1 159 -153 28 29 0 0 chr2 197879112 197879147 -55377436 + AT_rich Low_complexity Low_complexity 1 35 0 1688 228 123 63 chr2 197879218 197879353 -55377230 + MER21B LTR ERV1 39 164 -699 1500 159 34 44 chr2 197879353 197879648 -55376935 + AluJb SINE Alu 21 312 0 1688 228 123 63 chr2 197879648 197880241 -55376342 + MER21B LTR ERV1 164 811 -52 643 133 117 0 chr2 197880486 197880606 -55375977 + Tigger2a DNA MER2_type 1 134 -300 22 0 0 0 chr2 197881486 197881508 -55375075 + AT_rich Low_complexity Low_complexity 1 22 0 1129 292 74 11 chr2 197881563 197882035 -55374548 + L2 LINE L2 1893 2394 -920 595 347 96 25 chr2 197882206 197882644 -55373939 + L2 LINE L2 2804 3272 0 799 219 34 0 chr2 197883396 197883574 -55373009 + MER5A DNA MER1_type 5 188 -1 1640 118 115 11 chr2 197883724 197884003 -55372580 - AluSp SINE Alu -1 312 5 2404 147 52 0 chr2 197884074 197884476 -55372107 + MSTB LTR MaLR 3 425 -1 25 0 0 0 chr2 197884620 197884645 -55371938 + AT_rich Low_complexity Low_complexity 1 25 0 760 173 8 8 chr2 197885477 197885610 -55370973 - FLAM_C SINE Alu 0 133 1 10938 170 21 8 chr2 197885655 197886037 -55370546 - L1PB2 LINE L1 -3 6148 5772 723 211 0 0 chr2 197886037 197886170 -55370413 - FLAM_C SINE Alu 0 133 1 10938 170 21 8 chr2 197886170 197887523 -55369060 - L1PB2 LINE L1 -379 5772 4438 285 118 0 0 chr2 197887523 197887574 -55369009 + (TTTTA)n Simple_repeat Simple_repeat 2 52 0 10938 170 21 8 chr2 197887574 197889233 -55367350 - L1PB2 LINE L1 -1713 4438 2706 268 293 130 8 chr2 197890236 197890359 -55366224 + L2 LINE L2 2517 2654 -660 928 223 0 6 chr2 197890502 197890677 -55365906 + FAM SINE Alu 2 175 0 406 273 57 29 chr2 197891055 197891264 -55365319 - LTR16C LTR ERVL -34 457 243 2076 164 31 0 chr2 197891264 197891618 -55364965 + MLT1A1 LTR MaLR 1 365 0 292 376 12 43 chr2 197892732 197892894 -55363689 + L2 LINE L2 3099 3255 -17 1628 144 101 14 chr2 197892931 197893208 -55363375 + AluJo SINE Alu 1 301 -11 24 32 0 0 chr2 197893275 197893306 -55363277 + AT_rich Low_complexity Low_complexity 1 31 0 1142 137 69 49 chr2 197893369 197893573 -55363010 - AluJo SINE Alu -20 292 85 399 326 69 37 chr2 197893641 197893859 -55362724 - HAL1 LINE L1 -444 2063 1839 247 256 271 44 chr2 197893906 197894227 -55362356 - HAL1 LINE L1 -1622 885 492 277 135 39 0 chr2 197895132 197895184 -55361399 - MER49 LTR ERV1 0 923 870 2081 87 67 29 chr2 197895195 197895540 -55361043 - L1MA3 LINE L1 -1 6304 5947 3496 177 13 11 chr2 197895645 197896406 -55360177 - L1 LINE L1 -808 5338 4576 4597 140 51 30 chr2 197896406 197897265 -55359318 - MER49 LTR ERV1 -46 877 1 427 285 135 12 chr2 197898055 197898374 -55358209 + L1M4 LINE L1 4477 4834 -1312 2267 94 0 0 chr2 197898935 197899223 -55357360 - AluSx SINE Alu -22 290 3 318 100 29 14 chr2 197899533 197899603 -55356980 + (TA)n Simple_repeat Simple_repeat 1 71 0 1802 166 4 0 chr2 197899647 197899925 -55356658 - AluJb SINE Alu -27 285 7 236 406 8 23 chr2 197900424 197900552 -55356031 - L2 LINE L2 0 3272 3147 1434 158 0 64 chr2 197901545 197901613 -55354970 + AluJb SINE Alu 47 118 -194 2211 126 0 0 chr2 197901613 197901915 -55354668 - AluSx SINE Alu -7 305 4 1434 158 0 64 chr2 197901915 197902111 -55354472 + AluJb SINE Alu 118 294 -18 390 283 171 16 chr2 197903244 197903431 -55353152 - MIR SINE MIR 0 262 47 33 29 0 57 chr2 197903765 197903835 -55352748 + AT_rich Low_complexity Low_complexity 1 66 0 455 284 79 21 chr2 197904389 197904579 -55352004 + L2 LINE L2 3113 3313 0 24 85 0 0 chr2 197904735 197904794 -55351789 + AT_rich Low_complexity Low_complexity 1 59 0 1177 188 0 35 chr2 197904981 197905210 -55351373 + AluJo SINE Alu 4 224 -88 26 30 0 0 chr2 197906254 197906287 -55350296 + AT_rich Low_complexity Low_complexity 1 33 0 340 237 171 20 chr2 197906598 197906750 -55349833 - LTR33 LTR ERVL -333 188 14 532 254 124 15 chr2 197906806 197907007 -55349576 + L2 LINE L2 3081 3303 -10 2446 157 37 68 chr2 197907219 197907543 -55349040 - L1MCa LINE L1 -4143 2283 1951 2015 116 3 24 chr2 197907543 197907835 -55348748 - AluSx SINE Alu -26 286 1 2446 157 37 68 chr2 197907835 197908251 -55348332 - L1MCa LINE L1 -4475 1951 1463 3078 121 56 27 chr2 197908506 197909099 -55347484 - L1MA3 LINE L1 0 6305 5696 2524 135 164 2 chr2 197909099 197909332 -55347251 - L1MCa LINE L1 -4950 1476 1282 1804 155 14 7 chr2 197909332 197909628 -55346955 - AluJo SINE Alu -9 303 6 2524 135 164 2 chr2 197909628 197909935 -55346648 - L1MCa LINE L1 -5144 1282 848 24 0 0 0 chr2 197910114 197910138 -55346445 + AT_rich Low_complexity Low_complexity 1 24 0 634 250 53 53 chr2 197910710 197910974 -55345609 + HAL1 LINE L1 32 295 -2212 322 325 8 0 chr2 197911043 197911163 -55345420 + HAL1 LINE L1 1735 1855 -652 246 254 0 0 chr2 197911218 197911273 -55345310 + Tigger7 DNA MER2_type 1 55 -2432 * 650 107 157 29 chr2 197911270 197911410 -55345173 + Tigger7 DNA MER2_type 2231 2388 -103 2091 143 9 3 chr2 197911420 197911763 -55344820 + MER47A DNA MER2_type 22 366 0 762 123 0 0 chr2 197911763 197911867 -55344716 + Tigger7 DNA MER2_type 2388 2491 0 1794 94 8 0 chr2 197911885 197912146 -55344437 + AluSc SINE Alu 44 306 0 612 244 150 60 chr2 197912160 197912561 -55344022 + HAL1 LINE L1 2071 2507 0 1822 169 3 10 chr2 197913538 197913833 -55342750 + AluJb SINE Alu 1 293 -19 22 0 0 0 chr2 197914238 197914260 -55342323 + AT_rich Low_complexity Low_complexity 1 22 0 215 294 165 9 chr2 197914522 197914631 -55341952 + MIR SINE MIR 18 143 -119 39030 76 7 11 chr2 197914648 197917682 -55338901 + L1PA6 LINE L1 11 3054 -3100 2378 92 0 0 chr2 197917682 197917987 -55338596 + AluY SINE Alu 1 305 -6 39030 76 7 11 chr2 197917987 197921120 -55335463 + L1PA6 LINE L1 3054 6152 -2 192 152 30 0 chr2 197921123 197921156 -55335427 + MIR SINE MIR 151 184 -78 245 171 0 0 chr2 197921156 197921197 -55335386 + MER3 DNA MER1_type 2 42 -167 763 139 9 0 chr2 197921198 197921313 -55335270 + FLAM_C SINE Alu 2 117 -16 294 132 0 0 chr2 197921324 197921377 -55335206 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 279 54 0 0 chr2 197921377 197921414 -55335169 + (CA)n Simple_repeat Simple_repeat 2 38 0 307 206 14 27 chr2 197921416 197921489 -55335094 + MER3 DNA MER1_type 33 104 -105 2872 16 0 0 chr2 197921753 197922070 -55334513 - AluYb8 SINE Alu -1 317 1 467 229 133 21 chr2 197922073 197922261 -55334322 - Tigger8 DNA MER2_type -290 376 168 33 43 0 0 chr2 197922445 197922492 -55334091 + AT_rich Low_complexity Low_complexity 1 47 0 2359 87 7 0 chr2 197923267 197923567 -55333016 - AluSc SINE Alu -7 302 1 2168 127 0 0 chr2 197924014 197924306 -55332277 - AluSg SINE Alu -17 293 2 2294 99 20 0 chr2 197925084 197925388 -55331195 + AluSx SINE Alu 1 310 -2 2167 110 3 7 chr2 197925630 197925931 -55330652 + AluSc SINE Alu 3 302 -7 24 32 0 0 chr2 197926016 197926047 -55330536 + AT_rich Low_complexity Low_complexity 1 31 0 433 307 92 32 chr2 197927305 197927636 -55328947 + L2 LINE L2 2689 3311 -2 3896 246 127 35 chr2 197928013 197928311 -55328272 + L1MC4 LINE L1 6340 6609 -1433 405 0 0 0 chr2 197928311 197928356 -55328227 + (CA)n Simple_repeat Simple_repeat 2 46 0 3896 246 127 35 chr2 197928356 197928667 -55327916 + L1MC4 LINE L1 6609 6890 -1152 1983 167 0 0 chr2 197928667 197928973 -55327610 + AluJb SINE Alu 3 308 -4 3896 246 127 35 chr2 197928973 197929363 -55327220 + L1MC4 LINE L1 6890 7243 -799 693 193 17 0 chr2 197929363 197929482 -55327101 - FLAM_A SINE Alu -9 124 4 3896 246 127 35 chr2 197929482 197930018 -55326565 + L1MC4 LINE L1 7243 8019 -23 1082 122 89 22 chr2 197930405 197930585 -55325998 + AluJb SINE Alu 114 305 -7 1053 147 0 0 chr2 197931482 197931632 -55324951 - FRAM SINE Alu -23 153 4 372 43 0 0 chr2 197932724 197932770 -55323813 + (TG)n Simple_repeat Simple_repeat 1 46 0 180 256 0 0 chr2 197933231 197933274 -55323309 + MIR SINE MIR 218 260 -2 187 265 29 88 chr2 197933425 197933527 -55323056 + MIR SINE MIR 65 160 -102 189 0 0 0 chr2 197933798 197933819 -55322764 + (TAAAAA)n Simple_repeat Simple_repeat 2 22 0 2269 105 10 0 chr2 197934417 197934722 -55321861 - AluSx SINE Alu -2 310 3 1663 163 7 20 chr2 197934758 197935052 -55321531 - AluJb SINE Alu -20 292 3 2271 112 0 3 chr2 197935434 197935738 -55320845 + AluSg SINE Alu 1 303 -7 240 179 0 0 chr2 197936613 197936652 -55319931 - MER5C DNA MER1_type -2 322 284 2287 179 117 108 chr2 197936696 197937477 -55319106 - L1MC4a LINE L1 -5 7803 7016 288 214 167 0 chr2 197937477 197937561 -55319022 - MER5C DNA MER1_type -225 99 2 1898 132 0 0 chr2 197937771 197938029 -55318554 + AluSx SINE Alu 36 293 -19 180 129 16 32 chr2 197938029 197938091 -55318492 + (TA)n Simple_repeat Simple_repeat 1 61 0 303 28 0 0 chr2 197939567 197939603 -55316980 + (TG)n Simple_repeat Simple_repeat 1 36 0 839 177 56 10 chr2 197939603 197939801 -55316782 - L1MC5 LINE L1 -35 7926 7720 2073 153 0 3 chr2 197939849 197940162 -55316421 + AluJb SINE Alu 1 312 0 28 48 0 0 chr2 197940224 197940266 -55316317 + AT_rich Low_complexity Low_complexity 1 42 0 186 288 15 45 chr2 197942227 197942293 -55314290 + L2 LINE L2 3199 3262 -10 2405 85 0 0 chr2 197942627 197942920 -55313663 - AluSc SINE Alu -16 293 1 2395 78 0 0 chr2 197943757 197944053 -55312530 - AluSp SINE Alu -17 296 1 747 200 77 0 chr2 197945175 197945345 -55311238 - MER5A DNA MER1_type 0 189 7 33 25 0 0 chr2 197945603 197945643 -55310940 + AT_rich Low_complexity Low_complexity 1 40 0 327 296 45 0 chr2 197945746 197945834 -55310749 + MER5B DNA MER1_type 77 168 -10 761 62 0 55 chr2 197945893 197946039 -55310544 + (CA)n Simple_repeat Simple_repeat 2 139 0 282 227 182 11 chr2 197946039 197946127 -55310456 - MER5B DNA MER1_type -73 105 3 318 214 0 0 chr2 197947455 197947511 -55309072 - MER91 DNA MER1_type -5 191 136 2109 100 43 0 chr2 197947933 197948048 -55308535 + AluSx SINE Alu 1 110 -202 705 12 0 0 chr2 197948048 197948130 -55308453 + (CTA)n Simple_repeat Simple_repeat 3 84 0 2109 100 43 0 chr2 197948130 197948294 -55308289 + AluSx SINE Alu 110 292 -20 24 0 0 0 chr2 197949757 197949781 -55306802 + AT_rich Low_complexity Low_complexity 1 24 0 1770 199 0 10 chr2 197950147 197950454 -55306129 + AluJb SINE Alu 1 304 -8 29 43 0 43 chr2 197950484 197950553 -55306030 + AT_rich Low_complexity Low_complexity 1 66 0 2081 102 25 0 chr2 197950774 197951080 -55305503 - AluSx SINE Alu 0 313 1 1027 218 33 72 chr2 197951296 197951603 -55304980 - AluJo SINE Alu -11 301 7 2302 103 0 3 chr2 197952059 197952360 -55304223 + AluSg SINE Alu 1 300 -10 473 170 0 32 chr2 197952421 197952515 -55304068 + FLAM_A SINE Alu 41 131 -11 1871 136 7 17 chr2 197952949 197953243 -55303340 + AluSx SINE Alu 18 308 -4 22 70 0 0 chr2 197953544 197953587 -55302996 + AT_rich Low_complexity Low_complexity 1 43 0 22 88 0 0 chr2 197953999 197954056 -55302527 + AT_rich Low_complexity Low_complexity 1 57 0 1692 96 0 0 chr2 197954537 197954756 -55301827 - AluSg/x SINE Alu -12 298 80 1715 171 30 3 chr2 197955341 197955645 -55300938 + AluSx SINE Alu 1 312 0 23 0 0 0 chr2 197956693 197956716 -55299867 + AT_rich Low_complexity Low_complexity 1 23 0 526 133 11 11 chr2 197956941 197957031 -55299552 + HY4 scRNA scRNA 1 90 -3 207 0 0 0 chr2 197958165 197958188 -55298395 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 274 329 123 6 chr2 197960194 197960364 -55296219 + L2 LINE L2 2554 2743 -571 287 337 80 30 chr2 197960613 197960812 -55295771 - L2 LINE L2 -667 2647 2439 486 289 81 43 chr2 197960941 197961176 -55295407 - MIR SINE MIR -6 256 13 258 386 26 9 chr2 197961165 197961279 -55295304 + L2 LINE L2 3141 3256 -16 * 2199 145 85 15 chr2 197961410 197961581 -55295002 + MSTA LTR MaLR 1 159 -269 2290 98 7 0 chr2 197961581 197961877 -55294706 + AluSp SINE Alu 1 298 -15 2199 145 85 15 chr2 197961877 197962105 -55294478 + MSTA LTR MaLR 159 428 0 645 308 80 8 chr2 197962155 197962392 -55294191 - L2 LINE L2 -23 3290 3037 501 299 30 30 chr2 197962671 197962728 -55293855 - MIR SINE MIR -55 207 151 2324 83 0 7 chr2 197962728 197963030 -55293553 - AluY SINE Alu -11 300 1 501 299 30 30 chr2 197963030 197963169 -55293414 - MIR SINE MIR -110 152 11 5070 75 27 5 chr2 197963217 197963918 -55292665 - SVA Other Other 0 1386 690 472 234 141 70 chr2 197963920 197963991 -55292592 + MER102b DNA MER1_type 68 133 -1295 2264 99 3 3 chr2 197963991 197964293 -55292290 + AluSc SINE Alu 1 302 -7 472 234 141 70 chr2 197964293 197964477 -55292106 + MER102b DNA MER1_type 133 341 0 189 338 14 14 chr2 197966411 197966485 -55290098 - MIR SINE MIR -97 111 38 21 36 0 0 chr2 197966776 197966804 -55289779 + AT_rich Low_complexity Low_complexity 1 28 0 1009 51 0 44 chr2 197966804 197966941 -55289642 + AluSg/x SINE Alu 174 304 -8 534 238 205 0 chr2 197967411 197967596 -55288987 - MIR SINE MIR -28 234 12 28 29 0 0 chr2 197968266 197968301 -55288282 + AT_rich Low_complexity Low_complexity 1 35 0 2190 116 3 0 chr2 197968313 197968606 -55287977 - AluSg SINE Alu -16 294 1 182 336 114 23 chr2 197968664 197968795 -55287788 - L2 LINE L2 -5 3267 3125 2185 74 60 3 chr2 197969316 197969601 -55286982 - AluSc SINE Alu -8 301 1 3129 135 60 26 chr2 197969761 197969922 -55286661 - L1MB3 LINE L1 -8 6175 6021 2138 126 13 3 chr2 197969922 197970231 -55286352 + AluSx SINE Alu 1 312 0 3129 135 60 26 chr2 197970231 197970648 -55285935 - L1MB3 LINE L1 -162 6021 5577 857 297 157 24 chr2 197971935 197972437 -55284146 + L3 LINE CR1 726 1294 -283 1924 115 13 49 chr2 197972578 197972882 -55283701 + AluSx SINE Alu 1 293 -19 212 328 16 0 chr2 197972890 197972951 -55283632 + MIR3 SINE MIR 144 205 -3 1256 179 94 7 chr2 197973040 197973337 -55283246 + L1MD3 LINE L1 6885 7207 -788 377 319 35 0 chr2 197973459 197973575 -55283008 + L2 LINE L2 3190 3309 -4 234 287 200 7 chr2 197976329 197976479 -55280104 - L3b LINE CR1 -88 1495 1317 2218 87 3 3 chr2 197976927 197977213 -55279370 + AluSx SINE Alu 11 296 -16 285 271 59 51 chr2 197977476 197977594 -55278989 - MIR SINE MIR -104 158 40 660 173 0 9 chr2 197977658 197977768 -55278815 - FRAM SINE Alu -36 140 32 302 80 0 20 chr2 197978175 197978225 -55278358 + L1MA9 LINE L1 6264 6312 0 188 237 17 68 chr2 197980501 197980560 -55276023 + L2 LINE L2 2995 3050 -263 2168 87 29 0 chr2 197981604 197981880 -55274703 + AluSx SINE Alu 8 291 -21 2144 132 0 0 chr2 197982089 197982384 -55274199 + AluSx SINE Alu 1 295 -17 1583 141 31 19 chr2 197982414 197982670 -55273913 + AluJo SINE Alu 37 295 -17 1009 197 5 20 chr2 197982671 197982869 -55273714 + AluJo SINE Alu 1 195 -117 320 310 109 52 chr2 197983059 197983288 -55273295 - L2 LINE L2 -510 2804 2563 296 287 26 0 chr2 197983347 197983462 -55273121 - MER94 DNA DNA -3 131 14 2174 151 8 0 chr2 197983462 197983820 -55272763 - MER46B DNA MER2_type 0 236 1 30 21 0 21 chr2 197984385 197984407 -55272176 + AT_rich Low_complexity Low_complexity 1 22 -25 1915 120 7 31 chr2 197984407 197984699 -55271884 - AluJb SINE Alu -27 285 1 30 21 0 21 chr2 197984699 197984724 -55271859 + AT_rich Low_complexity Low_complexity 22 47 0 419 118 0 0 chr2 197985251 197985319 -55271264 + L1MB7 LINE L1 6096 6163 -21 263 165 16 8 chr2 197985495 197985558 -55271025 - L1M4 LINE L1 -3381 2765 2707 268 293 130 8 chr2 197986556 197986679 -55269904 + L2 LINE L2 2517 2654 -660 928 223 0 6 chr2 197986822 197986997 -55269586 + FAM SINE Alu 2 175 0 1956 121 13 3 chr2 197987236 197987542 -55269041 + MER1A DNA MER1_type 221 529 0 389 183 14 0 chr2 197987550 197987621 -55268962 + MER20 DNA MER1_type 148 219 0 775 239 21 36 chr2 197988331 197988661 -55267922 + MER46B DNA MER2_type 1 200 -36 1067 90 42 0 chr2 197988943 197989109 -55267474 - AluSg SINE Alu -109 201 29 818 170 0 30 chr2 197989110 197989275 -55267308 - L1MB3 LINE L1 -54 6129 5970 21 0 0 0 chr2 197989872 197989893 -55266690 + AT_rich Low_complexity Low_complexity 1 21 0 254 262 103 148 chr2 197992409 197992672 -55263911 - L2 LINE L2 -33 3239 2989 2262 101 17 0 chr2 197992733 197993031 -55263552 + AluSx SINE Alu 1 303 -9 263 315 204 17 chr2 197993113 197993402 -55263181 - L2 LINE L2 -527 2787 2445 533 223 171 29 chr2 197993430 197993605 -55262978 + MIR SINE MIR 14 213 -49 2378 71 0 26 chr2 197993660 197993969 -55262614 + AluSq SINE Alu 1 301 -12 324 327 9 9 chr2 197993979 197994092 -55262491 - L2 LINE L2 -958 2356 2244 2357 169 32 28 chr2 197994848 197995311 -55261272 - MLT1C LTR MaLR 0 467 3 494 194 35 53 chr2 197995685 197995855 -55260728 + Charlie5 DNA MER1_type 2419 2585 -27 386 326 58 0 chr2 197995856 197995994 -55260589 + MIR SINE MIR 6 151 -111 609 317 67 0 chr2 197996517 197996741 -55259842 - MIR SINE MIR -18 244 6 1000 154 141 57 chr2 197996742 197997041 -55259542 - MER33 DNA MER1_type 0 324 1 290 296 132 20 chr2 197997354 197997506 -55259077 - MIR SINE MIR -1 261 93 245 252 59 89 chr2 197998719 197998854 -55257729 + MIR SINE MIR 88 218 -44 486 250 51 87 chr2 197999374 197999508 -55257075 + MIR SINE MIR 60 186 -76 2010 134 17 0 chr2 197999508 197999806 -55256777 + AluSx SINE Alu 1 303 -9 486 250 51 87 chr2 197999806 197999867 -55256716 + MIR SINE MIR 186 248 -14 27 0 0 0 chr2 198000260 198000287 -55256296 + AT_rich Low_complexity Low_complexity 1 27 0 267 326 20 10 chr2 198000597 198000695 -55255888 + L2 LINE L2 3215 3313 0 342 123 0 0 chr2 198000837 198000894 -55255689 + (TA)n Simple_repeat Simple_repeat 2 58 0 349 249 131 85 chr2 198000919 198000959 -55255624 - MIR3 SINE MIR -63 145 108 257 24 49 0 chr2 198000959 198001000 -55255583 + (TTTA)n Simple_repeat Simple_repeat 2 156 0 2001 114 7 4 chr2 198001000 198001281 -55255302 - AluSx SINE Alu -1 322 1 349 249 131 85 chr2 198001281 198001405 -55255178 - MIR3 SINE MIR -99 109 15 643 254 68 6 chr2 198001412 198001589 -55254994 - MER5A DNA MER1_type 0 189 2 740 157 30 22 chr2 198002092 198002226 -55254357 - AluSq/x SINE Alu -177 135 1 1950 124 7 7 chr2 198002279 198002585 -55253998 - AluSx SINE Alu 0 306 1 1367 194 8 27 chr2 198002995 198003258 -55253325 + AluJo SINE Alu 11 268 -44 192 77 0 0 chr2 198003559 198003585 -55252998 + (TTCTG)n Simple_repeat Simple_repeat 1 26 0 272 304 82 37 chr2 198003676 198003811 -55252772 - MIR3 SINE MIR -17 191 51 2174 103 3 7 chr2 198004247 198004537 -55252046 + AluSx SINE Alu 1 289 -23 3159 149 30 22 chr2 198004542 198005134 -55251449 - L1MB4 LINE L1 -17 6163 5567 412 258 16 16 chr2 198005149 198005277 -55251306 + MER103 DNA DNA 39 166 0 249 333 35 26 chr2 198005359 198005473 -55251110 - MIR SINE MIR -70 138 24 215 344 10 31 chr2 198005545 198005641 -55250942 - MIR3 SINE MIR -110 98 5 1687 174 27 15 chr2 198006065 198006430 -55250153 - MER47B DNA MER2_type 0 418 1 189 0 0 0 chr2 198006928 198006949 -55249634 + (T)n Simple_repeat Simple_repeat 1 21 0 990 177 96 0 chr2 198007528 198007726 -55248857 - L1ME3 LINE L1 -53 6109 5893 270 243 165 78 chr2 198007826 198008032 -55248551 + LTR16A LTR ERVL 17 240 -210 320 272 11 0 chr2 198008044 198008136 -55248447 + LTR16A LTR ERVL 356 448 -2 185 263 0 0 chr2 198008152 198008190 -55248393 - MIR3 SINE MIR -54 154 117 23 33 0 0 chr2 198008487 198008517 -55248066 + AT_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr2 198008645 198008671 -55247912 + AT_rich Low_complexity Low_complexity 1 26 0 667 191 38 8 chr2 198009196 198009327 -55247256 - AluJo SINE Alu -176 136 2 22 0 0 0 chr2 198009778 198009800 -55246783 + AT_rich Low_complexity Low_complexity 1 22 0 251 286 137 30 chr2 198010105 198010273 -55246310 - L3b LINE CR1 -146 1437 1252 1471 161 174 44 chr2 198010342 198010726 -55245857 - Tigger2a DNA MER2_type 0 434 1 31 0 0 0 chr2 198013261 198013292 -55243291 + AT_rich Low_complexity Low_complexity 1 31 0 28 0 0 0 chr2 198013333 198013361 -55243222 + AT_rich Low_complexity Low_complexity 1 28 0 362 216 0 29 chr2 198014374 198014476 -55242107 - L1MC5 LINE L1 -100 7861 7763 1905 171 3 0 chr2 198014557 198014867 -55241716 - AluJb SINE Alu -1 311 1 23 33 0 0 chr2 198015247 198015277 -55241306 + AT_rich Low_complexity Low_complexity 1 30 0 28 48 0 0 chr2 198015489 198015531 -55241052 + AT_rich Low_complexity Low_complexity 1 42 0 1937 149 0 10 chr2 198016506 198016801 -55239782 - AluSx SINE Alu -20 292 1 267 79 0 0 chr2 198017614 198017652 -55238931 + (T)n Simple_repeat Simple_repeat 1 38 0 1984 92 55 4 chr2 198017734 198018007 -55238576 + AluSq SINE Alu 1 287 -26 467 265 173 11 chr2 198018915 198019458 -55237125 + L1MCc LINE L1 1179 1947 -4888 1847 148 3 30 chr2 198019476 198019780 -55236803 + AluSx SINE Alu 1 296 -16 323 310 41 21 chr2 198019794 198019939 -55236644 + L1MCc LINE L1 2014 2161 -4961 368 255 0 0 chr2 198019942 198020040 -55236543 + HsTC2c DNA Tc2 600 697 -32 669 290 51 18 chr2 198020049 198020192 -55236391 + L1MCc LINE L1 2174 2311 -4811 2229 112 13 0 chr2 198020192 198020497 -55236086 + AluSx SINE Alu 4 312 0 669 290 51 18 chr2 198020497 198020687 -55235896 + L1MCc LINE L1 2311 2518 -4604 331 238 123 43 chr2 198020734 198020969 -55235614 + L1MCc LINE L1 2600 2853 -4269 233 273 60 80 chr2 198021010 198021160 -55235423 - L2 LINE L2 -460 2854 2708 183 409 51 11 chr2 198021403 198021579 -55235004 - L2 LINE L2 -890 2424 2242 373 304 9 0 chr2 198021585 198021697 -55234886 + HsTC2c DNA Tc2 4 116 -613 1167 208 117 13 chr2 198021755 198022063 -55234520 + HsTC2c DNA Tc2 359 698 -31 210 246 18 0 chr2 198022075 198022132 -55234451 - L2 LINE L2 -1081 2233 2176 301 376 176 20 chr2 198022744 198022986 -55233597 - L2 LINE L2 -4 3309 3106 2285 84 7 7 chr2 198022986 198023285 -55233298 + AluY SINE Alu 1 299 -12 301 376 176 20 chr2 198023285 198023446 -55233137 - L2 LINE L2 -207 3106 2843 1695 126 54 88 chr2 198023495 198023883 -55232700 + THE1C LTR MaLR 1 375 0 1526 188 29 0 chr2 198024092 198024364 -55232219 - AluJo SINE Alu -30 282 3 248 315 169 28 chr2 198024389 198024815 -55231768 - HAL1 LINE L1 -785 1722 1237 536 182 67 48 chr2 198024984 198025149 -55231434 + MER112 DNA MER1_type 15 182 -78 1269 130 58 5 chr2 198025177 198025384 -55231199 + MER20 DNA MER1_type 1 218 -1 228 180 0 80 chr2 198025417 198025467 -55231116 + MER5B DNA MER1_type 2 47 -131 1589 160 96 36 chr2 198026432 198026764 -55229819 + MLT1A1 LTR MaLR 2 353 -12 190 416 62 0 chr2 198026929 198027042 -55229541 - L2 LINE L2 -5 3308 3189 4841 152 47 5 chr2 198027093 198028068 -55228515 - L1PB4 LINE L1 -22 6134 5127 472 276 112 39 chr2 198028234 198028466 -55228117 - MIR SINE MIR -6 256 8 1548 144 32 61 chr2 198028473 198028786 -55227797 - AluJo SINE Alu -8 304 1 182 306 83 14 chr2 198028846 198028918 -55227665 - MIR SINE MIR -82 180 104 2306 92 0 10 chr2 198029345 198029651 -55226932 + AluSc SINE Alu 1 303 -6 2172 108 0 0 chr2 198029697 198029984 -55226599 + AluSx SINE Alu 1 287 -25 212 31 62 0 chr2 198031383 198031415 -55225168 + T-rich Low_complexity Low_complexity 2 35 0 21 0 0 0 chr2 198031423 198031444 -55225139 + AT_rich Low_complexity Low_complexity 1 21 0 1663 72 0 5 chr2 198031444 198031667 -55224916 - L1PA5 LINE L1 -1 6153 5932 33 0 0 0 chr2 198032552 198032585 -55223998 + AT_rich Low_complexity Low_complexity 1 33 0 192 97 0 0 chr2 198034004 198034035 -55222548 + (TTG)n Simple_repeat Simple_repeat 2 32 0 21 0 0 0 chr2 198035093 198035114 -55221469 + AT_rich Low_complexity Low_complexity 1 21 0 228 233 0 0 chr2 198035532 198035575 -55221008 + L3 LINE CR1 1532 1574 -3 307 126 40 0 chr2 198035694 198035750 -55220833 - L1MA6 LINE L1 -588 5717 5660 2958 150 16 40 chr2 198035750 198036085 -55220498 + L1MA6 LINE L1 5736 6056 -244 2348 60 0 4 chr2 198036085 198036394 -55220189 - AluY SINE Alu 0 308 1 2958 150 16 40 chr2 198036394 198036630 -55219953 + L1MA6 LINE L1 6056 6296 -4 1289 296 97 4 chr2 198037441 198037894 -55218689 + L2 LINE L2 792 1286 -2028 1214 239 94 9 chr2 198037896 198038226 -55218357 + L2 LINE L2 2439 2796 -518 565 225 77 7 chr2 198038240 198038417 -55218166 - MER58B DNA MER1_type -2 339 1 1269 258 129 13 chr2 198038419 198038869 -55217714 + L2 LINE L2 2810 3311 -2 187 241 175 102 chr2 198039408 198039545 -55217038 - L2 LINE L2 -546 2768 2622 24 0 0 0 chr2 198039936 198039960 -55216623 + AT_rich Low_complexity Low_complexity 1 24 0 712 126 10 0 chr2 198039960 198040063 -55216520 - AluSx SINE Alu -20 289 186 * 747 98 0 0 chr2 198040060 198040162 -55216421 - AluSx SINE Alu -171 141 40 1815 112 0 4 chr2 198040636 198040887 -55215696 - AluY SINE Alu -12 299 50 23 33 0 0 chr2 198041065 198041095 -55215488 + AT_rich Low_complexity Low_complexity 1 30 0 2233 87 28 0 chr2 198041478 198041764 -55214819 + AluSc SINE Alu 1 294 -15 358 251 173 34 chr2 198042135 198042314 -55214269 + MIR SINE MIR 59 262 0 199 246 53 114 chr2 198042406 198042520 -55214063 - L2 LINE L2 -296 2976 2870 1771 142 69 0 chr2 198042907 198043181 -55213402 - AluJo SINE Alu -19 293 1 1828 134 74 7 chr2 198043816 198044099 -55212484 + AluJb SINE Alu 3 304 -8 370 119 0 0 chr2 198045335 198045394 -55211189 - AluJo SINE Alu 0 302 244 926 150 7 26 chr2 198045403 198045556 -55211027 - AluJo SINE Alu -119 193 44 2576 173 80 7 chr2 198045792 198046340 -55210243 + L1MB8 LINE L1 5575 6162 -16 245 250 0 91 chr2 198046531 198046619 -55209964 - L2 LINE L2 -2 3311 3232 * 478 251 33 33 chr2 198046605 198046788 -55209795 + L2 LINE L2 2331 2513 -801 2161 120 3 3 chr2 198047160 198047461 -55209122 - AluSq SINE Alu -12 301 1 201 345 52 94 chr2 198047521 198047808 -55208775 + L2 LINE L2 2685 2959 -355 21 36 0 0 chr2 198047859 198047887 -55208696 + AT_rich Low_complexity Low_complexity 1 28 0 341 291 48 0 chr2 198047912 198048015 -55208568 + L2 LINE L2 3201 3308 -5 2379 170 0 5 chr2 198048281 198048686 -55207897 - MER57A LTR ERV1 0 403 1 480 300 111 19 chr2 198049254 198049486 -55207097 + MIR SINE MIR 10 261 -1 208 319 152 0 chr2 198050370 198050508 -55206075 + L2 LINE L2 1963 2121 -1193 1398 184 152 11 chr2 198050755 198051130 -55205453 - LTR56 LTR ERV1 0 445 18 240 200 0 0 chr2 198051133 198051183 -55205400 + (TA)n Simple_repeat Simple_repeat 1 50 0 2230 111 0 0 chr2 198051183 198051480 -55205103 - AluSx SINE Alu -7 305 9 231 295 185 62 chr2 198051799 198052026 -55204557 - MIR SINE MIR -6 256 2 2331 109 0 0 chr2 198052532 198052834 -55203749 + AluSx SINE Alu 1 302 -10 2147 137 0 0 chr2 198053022 198053328 -55203255 - AluSx SINE Alu -6 306 1 814 248 179 58 chr2 198053791 198053899 -55202684 - HAL1 LINE L1 -655 1852 1759 2067 136 24 0 chr2 198053899 198054194 -55202389 - AluSx SINE Alu -10 302 1 814 248 179 58 chr2 198054194 198054274 -55202309 - HAL1 LINE L1 -748 1759 1690 1628 149 48 30 chr2 198054274 198054400 -55202183 + AluJo SINE Alu 1 123 -189 2250 103 0 7 chr2 198054400 198054700 -55201883 + AluSx SINE Alu 1 298 -14 1628 149 48 30 chr2 198054700 198054868 -55201715 + AluJo SINE Alu 123 300 -12 814 248 179 58 chr2 198054868 198055022 -55201561 - HAL1 LINE L1 -817 1690 1556 2043 116 0 0 chr2 198055022 198055297 -55201286 - AluSg SINE Alu -2 308 34 814 248 179 58 chr2 198055297 198055750 -55200833 - HAL1 LINE L1 -951 1556 958 551 273 208 0 chr2 198056422 198056576 -55200007 + MER5A DNA MER1_type 4 189 0 23 33 0 0 chr2 198058027 198058057 -55198526 + AT_rich Low_complexity Low_complexity 1 30 0 377 277 93 7 chr2 198059923 198060068 -55196515 - MIR SINE MIR -47 161 1 208 288 163 0 chr2 198061129 198061209 -55195374 - MIR SINE MIR -109 153 61 1966 110 23 32 chr2 198061212 198061521 -55195062 - AluSq SINE Alu -2 311 6 2057 136 3 3 chr2 198061676 198061985 -55194598 - AluSq SINE Alu -2 311 3 22 56 0 0 chr2 198062060 198062096 -55194487 + AT_rich Low_complexity Low_complexity 1 36 0 24 67 0 0 chr2 198062311 198062356 -55194227 + AT_rich Low_complexity Low_complexity 1 45 0 753 160 137 98 chr2 198064372 198064729 -55191854 - L1MC5 LINE L1 -58 7903 7533 238 289 13 0 chr2 198065244 198065320 -55191263 + MIR SINE MIR 163 239 -23 180 250 0 0 chr2 198065728 198065776 -55190807 + T-rich Low_complexity Low_complexity 4 51 0 186 303 131 29 chr2 198066037 198066212 -55190371 - L2 LINE L2 -273 2999 2807 204 250 39 0 chr2 198067044 198067096 -55189487 - L2 LINE L2 0 3272 3219 822 263 86 4 chr2 198067373 198067605 -55188978 - MIR SINE MIR -10 252 2 420 299 47 8 chr2 198067614 198067741 -55188842 + MER5B DNA MER1_type 1 132 -46 1787 236 20 13 chr2 198068245 198068702 -55187881 - L1ME2 LINE L1 0 6164 5705 918 222 56 25 chr2 198068681 198068965 -55187618 - L1ME LINE L1 -3258 2822 2530 * 351 0 0 0 chr2 198068971 198069010 -55187573 + (T)n Simple_repeat Simple_repeat 1 39 0 577 225 139 10 chr2 198069063 198069316 -55187267 - L1ME LINE L1 -3813 2267 2020 993 237 109 101 chr2 198069509 198069638 -55186945 - L1ME LINE L1 -4566 1514 1388 2245 88 10 3 chr2 198069638 198069933 -55186650 + AluSx SINE Alu 1 297 -15 993 237 109 101 chr2 198069933 198070809 -55185774 - L1ME LINE L1 -4692 1388 526 230 208 0 97 chr2 198070995 198071067 -55185516 - L1ME LINE L1 -5549 521 457 472 324 28 24 chr2 198071105 198071358 -55185225 - L1ME LINE L1 -5723 347 94 237 33 0 0 chr2 198071365 198071395 -55185188 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 2177 126 0 10 chr2 198071418 198071727 -55184856 - AluSx SINE Alu -6 306 1 2474 90 0 0 chr2 198072546 198072856 -55183727 + AluSg SINE Alu 1 310 0 432 0 0 0 chr2 198072858 198072906 -55183677 + (TA)n Simple_repeat Simple_repeat 2 49 0 397 221 171 93 chr2 198073082 198073467 -55183116 - L1MC5 LINE L1 -54 7907 7493 248 243 78 10 chr2 198073697 198073800 -55182783 - L1MC4a LINE L1 -632 7176 7067 23 33 0 0 chr2 198073861 198073891 -55182692 + AT_rich Low_complexity Low_complexity 1 30 0 672 315 98 17 chr2 198074807 198075042 -55181541 - MIR SINE MIR 0 262 9 240 226 57 0 chr2 198075255 198075308 -55181275 + L2 LINE L2 3255 3310 -3 346 333 77 27 chr2 198077041 198077118 -55179465 + MIR SINE MIR 52 124 -138 921 240 70 4 chr2 198077118 198077360 -55179223 - MIR SINE MIR -3 259 2 346 333 77 27 chr2 198077360 198077465 -55179118 + MIR SINE MIR 124 243 -19 2209 110 3 3 chr2 198077705 198078004 -55178579 + AluSx SINE Alu 1 299 -13 277 111 22 0 chr2 198079055 198079100 -55177483 - MSTB1 LTR MaLR -4 428 383 560 96 0 0 chr2 198079145 198079218 -55177365 - MSTB1 LTR MaLR -51 381 309 2145 164 57 59 chr2 198079219 198079386 -55177197 - MSTB-int LTR MaLR -1175 476 310 1466 118 45 5 chr2 198079386 198079607 -55176976 + MER30 DNA MER1_type 1 230 0 2145 164 57 59 chr2 198079607 198079916 -55176667 - MSTB-int LTR MaLR -1341 310 1 2402 140 52 5 chr2 198079916 198080323 -55176260 - MSTB LTR MaLR 0 426 1 23 0 0 0 chr2 198080364 198080387 -55176196 + AT_rich Low_complexity Low_complexity 1 23 0 1951 140 0 11 chr2 198080795 198081104 -55175479 - AluSg SINE Alu 0 306 1 1450 142 199 0 chr2 198081860 198082141 -55174442 + MER1B DNA MER1_type 1 337 0 205 261 221 33 chr2 198083201 198083442 -55173141 - L2 LINE L2 -1153 2161 1848 1251 199 4 12 chr2 198083442 198083683 -55172900 + MER8 DNA MER2_type 1 239 0 205 261 221 33 chr2 198083683 198083748 -55172835 - L2 LINE L2 -1466 1848 1797 2199 116 3 13 chr2 198083841 198084151 -55172432 + AluSx SINE Alu 1 307 -5 472 269 180 55 chr2 198084714 198084785 -55171798 + L2 LINE L2 2942 3003 -310 1595 169 27 14 chr2 198084785 198085081 -55171502 - AluJo SINE Alu -12 300 1 472 269 180 55 chr2 198085081 198085336 -55171247 + L2 LINE L2 3003 3309 -4 2131 104 24 0 chr2 198086171 198086460 -55170123 - AluSq SINE Alu -17 296 1 1802 90 41 38 chr2 198087301 198087591 -55168992 - AluSx SINE Alu -21 291 1 2574 83 143 0 chr2 198088513 198088920 -55167663 - MER4C LTR ERV1 0 465 1 653 121 0 10 chr2 198089378 198089477 -55167106 + MER4A LTR ERV1 1 98 -566 279 98 24 0 chr2 198089479 198089520 -55167063 + MER4A LTR ERV1 263 304 -360 4809 86 63 23 chr2 198089547 198090319 -55166264 - MER4C-int LTR ERV1 -89 6509 5707 296 133 0 0 chr2 198090319 198090364 -55166219 + MER4A LTR ERV1 620 664 0 4520 94 12 17 chr2 198090459 198091106 -55165477 - MER4A LTR ERV1 -16 648 5 848 242 16 0 chr2 198091254 198091440 -55165143 - MER5A DNA MER1_type 0 189 1 228 337 35 0 chr2 198091583 198091669 -55164914 + MIR3 SINE MIR 115 203 -5 22 35 0 0 chr2 198092108 198092137 -55164446 + AT_rich Low_complexity Low_complexity 1 29 0 580 174 0 0 chr2 198092953 198093051 -55163532 - MER5A DNA MER1_type -82 107 10 813 254 121 82 chr2 198093297 198093795 -55162788 + MLT1H1 LTR MaLR 42 595 0 2197 106 0 0 chr2 198093974 198094279 -55162304 - AluSq SINE Alu 0 305 1 196 381 78 52 chr2 198094598 198094868 -55161715 - L2 LINE L2 0 3272 2996 31533 103 21 54 chr2 198095163 198099384 -55157199 - L1PA7 LINE L1 -2 6467 2229 2300 100 7 0 chr2 198099384 198099693 -55156890 - AluY SINE Alu 0 311 1 31533 103 21 54 chr2 198099693 198101853 -55154730 - L1PA7 LINE L1 -4240 2229 1 391 247 13 0 chr2 198101875 198101952 -55154631 - MER2 DNA MER2_type 0 345 268 668 183 0 51 chr2 198101970 198102107 -55154476 - MER2 DNA MER2_type -215 130 1 25 110 0 0 chr2 198102811 198102920 -55153663 + AT_rich Low_complexity Low_complexity 1 109 0 25 65 0 0 chr2 198103111 198103157 -55153426 + AT_rich Low_complexity Low_complexity 1 46 0 968 176 12 0 chr2 198104031 198104196 -55152387 + AluSg/x SINE Alu 131 297 -13 35 41 0 0 chr2 198105043 198105092 -55151491 + AT_rich Low_complexity Low_complexity 1 49 0 505 342 82 8 chr2 198105118 198105361 -55151222 + MIR SINE MIR 2 262 0 1460 146 84 24 chr2 198106097 198106384 -55150199 + AluJb SINE Alu 1 304 -8 340 206 55 0 chr2 198106433 198106506 -55150077 - MIR SINE MIR -1 261 185 349 383 130 7 chr2 198106837 198107145 -55149438 + L2 LINE L2 2510 2855 -459 252 392 21 0 chr2 198107304 198107401 -55149182 + L2 LINE L2 2985 3083 -189 322 287 70 33 chr2 198108232 198108476 -55148107 - L1ME4a LINE L1 -268 5853 5601 255 224 48 24 chr2 198108662 198108787 -55147796 - L1ME4a LINE L1 -681 5440 5313 2782 118 14 11 chr2 198108862 198109301 -55147282 - MER83 LTR ERV1 -8 440 1 2127 132 3 0 chr2 198109497 198109808 -55146775 - AluSx SINE Alu 0 312 1 344 277 44 87 chr2 198109990 198110196 -55146387 + MIR SINE MIR 66 262 0 22 35 0 0 chr2 198111437 198111466 -55145117 + AT_rich Low_complexity Low_complexity 1 29 0 1919 146 13 3 chr2 198111814 198112130 -55144453 - L1PA16 LINE L1 -9 6157 5839 232 313 239 0 chr2 198112372 198112506 -55144077 - MIR SINE MIR -11 251 86 316 364 65 22 chr2 198112924 198113108 -55143475 + MIR SINE MIR 20 211 -51 210 308 192 23 chr2 198114233 198114405 -55142178 - MIR SINE MIR -13 249 49 420 222 118 0 chr2 198114450 198114585 -55141998 - L1ME4a LINE L1 -4 6117 5967 379 222 42 69 chr2 198114783 198114927 -55141656 - L1ME4a LINE L1 -259 5862 5723 316 237 108 50 chr2 198115054 198115193 -55141390 + L1ME4a LINE L1 5868 6014 -107 1039 288 89 29 chr2 198115193 198115853 -55140730 + L2 LINE L2 2604 3304 -9 26 74 0 0 chr2 198115891 198115945 -55140638 + AT_rich Low_complexity Low_complexity 1 54 0 4997 235 29 16 chr2 198115978 198116370 -55140213 - L1 LINE L1 -2740 3642 3257 2121 114 7 10 chr2 198116370 198116667 -55139916 - AluSx SINE Alu -16 296 1 4997 235 29 16 chr2 198116667 198117867 -55138716 - L1 LINE L1 -3125 3257 2025 21 57 0 0 chr2 198119997 198120032 -55136551 + AT_rich Low_complexity Low_complexity 1 35 0 23 33 0 0 chr2 198120389 198120419 -55136164 + AT_rich Low_complexity Low_complexity 1 30 0 1987 141 0 3 chr2 198120429 198120735 -55135848 + AluSx SINE Alu 1 305 -7 21 0 0 0 chr2 198121133 198121154 -55135429 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 198121614 198121635 -55134948 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 198122570 198122598 -55133985 + AT_rich Low_complexity Low_complexity 1 28 0 694 262 205 5 chr2 198122896 198123106 -55133477 - MIR SINE MIR -2 260 9 346 224 26 0 chr2 198123628 198123704 -55132879 - MIR SINE MIR -114 148 71 21 0 0 0 chr2 198124100 198124121 -55132462 + AT_rich Low_complexity Low_complexity 1 21 0 1933 197 75 25 chr2 198124268 198124487 -55132096 - L1MD1 LINE L1 -5 6237 6030 2192 115 23 0 chr2 198124487 198124792 -55131791 - AluSx SINE Alu 0 312 1 1933 197 75 25 chr2 198124792 198125055 -55131528 - L1MD1 LINE L1 -212 6030 5731 2755 163 82 24 chr2 198125920 198126587 -55129996 - L1MDa LINE L1 -3931 2610 1902 2196 182 47 11 chr2 198126634 198127101 -55129482 + L1MB5 LINE L1 5440 5923 -251 836 172 35 7 chr2 198127104 198127249 -55129334 + Tigger7 DNA MER2_type 4 152 -2335 493 186 12 0 chr2 198127255 198127341 -55129242 + Tigger7 DNA MER2_type 2501 2587 0 1033 203 21 21 chr2 198127341 198127577 -55129006 + L1MB5 LINE L1 5922 6157 -17 2262 80 18 15 chr2 198127585 198127911 -55128672 - L1PA8A LINE L1 0 6131 5805 211 301 14 14 chr2 198128011 198128084 -55128499 + CT-rich Low_complexity Low_complexity 4 76 0 841 272 61 20 chr2 198128363 198128760 -55127823 - MLT1J LTR MaLR -64 447 1 343 368 31 58 chr2 198128760 198128983 -55127600 - HAL1 LINE L1 -1919 588 372 1248 308 67 27 chr2 198129375 198129975 -55126608 - L2 LINE L2 -1179 2135 1512 474 337 191 21 chr2 198130015 198130644 -55125939 - L2 LINE L2 -7 3265 2534 1755 234 8 16 chr2 198130662 198131038 -55125545 - MER82 DNA MER2_type -21 632 260 2072 131 0 3 chr2 198131040 198131337 -55125246 + AluSx SINE Alu 3 298 -14 243 0 0 0 chr2 198133054 198133081 -55123502 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 404 184 184 0 chr2 198133082 198133169 -55123414 - MER82 DNA MER2_type -385 268 166 564 248 114 0 chr2 198133372 198133521 -55123062 - MER82 DNA MER2_type -486 167 2 719 280 109 55 chr2 198133554 198134207 -55122376 - L2 LINE L2 -816 2498 1811 2269 73 26 0 chr2 198134453 198134756 -55121827 - AluY SINE Alu 0 311 1 2335 57 20 10 chr2 198134756 198135053 -55121530 - AluY SINE Alu -11 300 1 1744 153 7 47 chr2 198135063 198135363 -55121220 - AluJo SINE Alu -23 289 2 1166 191 83 14 chr2 198135656 198135935 -55120648 - L1MD2 LINE L1 -17 8006 6241 725 174 230 0 chr2 198135938 198136099 -55120484 - MER3 DNA MER1_type 0 209 12 1180 244 25 32 chr2 198136114 198136515 -55120068 - L1MC4 LINE L1 -222 7563 7208 2279 67 3 10 chr2 198138566 198138866 -55117717 + AluSc SINE Alu 1 298 -11 700 149 116 48 chr2 198139230 198139536 -55117047 - L1MC4 LINE L1 -1 7807 7014 1385 167 4 24 chr2 198139545 198139796 -55116787 - AluJo SINE Alu -26 286 41 1360 158 12 21 chr2 198139849 198140089 -55116494 - AluJb SINE Alu -71 241 4 425 136 12 12 chr2 198140089 198140170 -55116413 - L1MC4 LINE L1 -282 7760 7680 1876 81 0 0 chr2 198140361 198140596 -55115987 + AluSg/x SINE Alu 66 300 -12 311 183 0 17 chr2 198140667 198140727 -55115856 - L1MC4a LINE L1 -745 7063 7005 919 149 0 19 chr2 198140743 198140897 -55115686 + AluJb SINE Alu 151 301 -11 420 167 26 0 chr2 198140897 198140975 -55115608 - L1MC4 LINE L1 -1020 7022 6943 355 277 62 18 chr2 198141448 198141560 -55115023 + L2 LINE L2 3156 3272 0 278 223 62 62 chr2 198141769 198141881 -55114702 + MER103 DNA DNA 42 153 -13 31 99 0 0 chr2 198142851 198142952 -55113631 + AT_rich Low_complexity Low_complexity 1 101 0 21 0 0 0 chr2 198143295 198143316 -55113267 + AT_rich Low_complexity Low_complexity 1 21 0 234 0 0 0 chr2 198144430 198144456 -55112127 + (CA)n Simple_repeat Simple_repeat 2 27 0 365 314 171 0 chr2 198144534 198144674 -55111909 - MER5A DNA MER1_type 0 189 26 703 142 64 101 chr2 198144675 198144893 -55111690 - MER58 DNA MER1_type -3 2417 2208 1193 210 17 48 chr2 198144895 198145013 -55111570 + L1ME1 LINE L1 5827 5947 -219 1592 169 0 47 chr2 198145013 198145332 -55111251 + AluJo SINE Alu 1 304 -8 1193 210 17 48 chr2 198145332 198145504 -55111079 + L1ME1 LINE L1 5947 6108 -58 413 89 0 0 chr2 198145504 198145560 -55111023 + MLT1F LTR MaLR 199 254 -288 790 154 56 31 chr2 198145565 198145727 -55110856 + L1M3f LINE L1 11 176 -5152 * 6902 84 34 11 chr2 198145726 198146224 -55110359 + L1MA2 LINE L1 5285 5770 -534 2093 127 3 3 chr2 198146224 198146532 -55110051 + AluSx SINE Alu 1 308 -4 6902 84 34 11 chr2 198146532 198147030 -55109553 + L1MA2 LINE L1 5770 6304 0 6078 185 54 40 chr2 198147035 198148034 -55108549 + L1M3f LINE L1 161 1144 -5184 1671 141 35 10 chr2 198148034 198148168 -55108415 + AluY SINE Alu 1 130 -181 2375 90 0 0 chr2 198148168 198148467 -55108116 + AluY SINE Alu 1 299 -12 1671 141 35 10 chr2 198148467 198148622 -55107961 + AluY SINE Alu 130 297 -14 6078 185 54 40 chr2 198148622 198148828 -55107755 + L1M3f LINE L1 1144 1346 -4982 355 140 0 0 chr2 198148828 198148878 -55107705 + AluY SINE Alu 1 50 -250 1472 93 0 0 chr2 198148878 198149071 -55107512 + AluY SINE Alu 99 291 -20 6078 185 54 40 chr2 198149071 198150212 -55106371 + L1M3f LINE L1 1345 2550 -3778 22 79 0 0 chr2 198150847 198150885 -55105698 + AT_rich Low_complexity Low_complexity 1 38 0 1580 148 64 0 chr2 198150885 198151196 -55105387 - L1MA6 LINE L1 -8 6292 5962 376 272 112 8 chr2 198152697 198152822 -55103761 + MIR SINE MIR 8 145 -117 789 248 99 33 chr2 198152945 198153827 -55102756 + HAL1 LINE L1 810 1815 -692 1894 162 0 3 chr2 198153827 198154124 -55102459 + AluJo SINE Alu 1 296 -16 789 248 99 33 chr2 198154124 198154355 -55102228 + HAL1 LINE L1 1815 2029 -478 4528 141 34 37 chr2 198154580 198155438 -55101145 + L1PB4 LINE L1 5294 6148 -8 368 280 50 0 chr2 198157113 198157213 -55099370 - MIR SINE MIR -56 206 102 454 200 0 0 chr2 198158071 198158146 -55098437 + MER69 DNA AcHobo 1 75 -2451 555 191 14 64 chr2 198158179 198158320 -55098263 + MER69 DNA AcHobo 2389 2522 -4 1047 169 12 0 chr2 198158337 198158509 -55098074 + MER1B DNA MER1_type 1 174 -123 431 200 92 23 chr2 198159858 198159988 -55096595 + MER113 DNA MER1_type? 34 172 -349 1886 134 0 0 chr2 198160007 198160275 -55096308 + AluSx SINE Alu 1 268 -44 395 262 81 16 chr2 198160577 198160724 -55095859 - L1M4 LINE L1 -6219 427 2 2166 87 0 84 chr2 198160780 198160802 -55095781 - AluSq SINE Alu -6 307 285 210 118 0 0 chr2 198160802 198160836 -55095747 + (TCTA)n Simple_repeat Simple_repeat 1 34 0 2166 87 0 84 chr2 198160836 198161148 -55095435 - AluSq SINE Alu -28 285 1 23 33 0 0 chr2 198161801 198161831 -55094752 + AT_rich Low_complexity Low_complexity 1 30 0 351 270 43 9 chr2 198162035 198162150 -55094433 + MIR SINE MIR 123 241 -21 7318 147 45 2 chr2 198163395 198164604 -55091979 - Tigger1 DNA MER2_type -1103 1315 55 3987 187 18 11 chr2 198164954 198165028 -55091555 + L1 LINE L1 2344 2416 -3730 1950 180 94 8 chr2 198165028 198165422 -55091161 + MSTA LTR MaLR 1 428 0 9855 157 10 7 chr2 198165422 198167067 -55089516 + MSTA-int LTR MaLR 1 1650 -1 2159 168 73 0 chr2 198167068 198167467 -55089116 + MSTA LTR MaLR 1 428 0 3987 187 18 11 chr2 198167467 198168216 -55088367 + L1 LINE L1 2415 3176 -2970 1254 223 29 4 chr2 198168227 198168465 -55088118 + MLT1F1 LTR MaLR 247 490 -77 257 361 8 54 chr2 198168971 198169101 -55087482 + MIR3 SINE MIR 42 165 -43 533 224 52 0 chr2 198169265 198169381 -55087202 + FLAM_C SINE Alu 1 122 -21 22 0 0 0 chr2 198169797 198169819 -55086764 + AT_rich Low_complexity Low_complexity 1 22 0 452 285 91 55 chr2 198169893 198170058 -55086525 + MIR SINE MIR 47 217 -45 21 0 0 0 chr2 198170400 198170421 -55086162 + AT_rich Low_complexity Low_complexity 1 21 0 302 252 144 27 chr2 198170438 198170549 -55086034 + MIR SINE MIR 30 153 -109 245 269 10 58 chr2 198171399 198171503 -55085080 - L1ME4a LINE L1 -71 6050 5952 21 82 0 0 chr2 198171728 198171777 -55084806 + AT_rich Low_complexity Low_complexity 1 49 0 722 204 21 70 chr2 198171969 198172155 -55084428 + MER8 DNA MER2_type 1 177 -62 1459 122 206 0 chr2 198172208 198172455 -55084128 + AluSg SINE Alu 2 299 -1 380 197 0 0 chr2 198172460 198172521 -55084062 - Tigger2 DNA MER2_type -2656 62 2 2314 98 10 0 chr2 198172559 198172865 -55083718 - AluSc SINE Alu 0 309 1 2312 100 3 0 chr2 198172964 198173263 -55083320 - AluSq SINE Alu -13 300 1 213 65 0 0 chr2 198173263 198173294 -55083289 + (T)n Simple_repeat Simple_repeat 1 31 0 498 148 0 65 chr2 198173312 198173420 -55083163 - HY1 scRNA scRNA -9 103 3 2277 104 3 7 chr2 198174130 198174438 -55082145 - AluSx SINE Alu -5 307 1 1977 192 32 73 chr2 198174690 198175252 -55081331 + MER34 LTR ERV1 4 542 0 226 320 51 0 chr2 198176125 198176203 -55080380 + L2 LINE L2 3173 3254 -18 2344 100 7 0 chr2 198176289 198176599 -55079984 + AluSq SINE Alu 1 312 -1 730 231 19 62 chr2 198176603 198176811 -55079772 - MIR SINE MIR -56 206 8 963 48 81 0 chr2 198177412 198177536 -55079047 - MER85 DNA T2_type -5 134 1 4427 132 18 34 chr2 198177887 198178662 -55077921 - L1PB4 LINE L1 -1 6155 5393 2802 10 0 0 chr2 198179099 198179404 -55077179 - AluYa5 SINE Alu -6 305 1 1871 166 0 14 chr2 198179523 198179818 -55076765 - AluJo SINE Alu -21 291 1 1543 121 9 0 chr2 198179894 198180132 -55076451 + AluSg SINE Alu 64 303 0 986 229 47 131 chr2 198180681 198180756 -55075827 + L1ME3 LINE L1 5148 5228 -934 2096 104 0 0 chr2 198180756 198181024 -55075559 - AluSx SINE Alu -39 273 6 986 229 47 131 chr2 198181024 198181840 -55074743 + L1ME3 LINE L1 5228 5951 -211 35 41 0 0 chr2 198182100 198182149 -55074434 + AT_rich Low_complexity Low_complexity 1 49 0 2282 98 0 3 chr2 198184566 198184861 -55071722 + AluSg SINE Alu 1 294 -16 1800 194 18 0 chr2 198184994 198185335 -55071248 + MER7A DNA MER2_type 1 345 -1 12093 112 21 24 chr2 198185865 198186130 -55070453 - Tigger1 DNA MER2_type -413 2005 1741 2355 77 0 7 chr2 198186130 198186430 -55070153 - AluY SINE Alu -13 298 1 12093 112 21 24 chr2 198186430 198186700 -55069883 - Tigger1 DNA MER2_type -677 1741 1472 1806 151 36 0 chr2 198186700 198186979 -55069604 - AluJb SINE Alu -13 299 11 12093 112 21 24 chr2 198186979 198188351 -55068232 - Tigger1 DNA MER2_type -946 1472 101 3709 138 11 25 chr2 198188351 198189278 -55067305 + L1PA16 LINE L1 5260 6150 -16 629 198 9 0 chr2 198189281 198189397 -55067186 - Tigger1 DNA MER2_type -2301 117 1 1525 205 102 20 chr2 198189398 198189798 -55066785 + L1MD2 LINE L1 5923 6355 -4 236 306 139 0 chr2 198189928 198190036 -55066547 + MLT1J LTR MaLR 39 161 -350 271 169 13 65 chr2 198190143 198190220 -55066363 + MLT1J LTR MaLR 327 399 -112 272 313 50 0 chr2 198190381 198190600 -55065983 + L1MEc LINE L1 1574 1987 -4620 1102 174 0 0 chr2 198190603 198190775 -55065808 + FAM SINE Alu 1 172 -3 315 294 170 25 chr2 198190930 198191165 -55065418 + L1MEc LINE L1 2230 2498 -4109 1553 206 0 7 chr2 198191191 198191473 -55065110 - AluJo SINE Alu -30 282 3 290 256 66 8 chr2 198191514 198191635 -55064948 + L1MEc LINE L1 2461 2588 -3838 24 91 0 0 chr2 198191774 198191840 -55064743 + AT_rich Low_complexity Low_complexity 1 66 0 1456 166 126 9 chr2 198192061 198192386 -55064197 + MLT1A1 LTR MaLR 3 365 0 1891 115 0 4 chr2 198192422 198192692 -55063891 + AluSg1 SINE Alu 39 307 -2 181 100 75 0 chr2 198192746 198192786 -55063797 + CT-rich Low_complexity Low_complexity 4 46 0 2018 134 23 7 chr2 198192796 198193102 -55063481 - AluJb SINE Alu -1 311 1 973 293 117 4 chr2 198193377 198193916 -55062667 - L1ME3A LINE L1 -218 5952 5353 41827 58 3 2 chr2 198193922 198200061 -55056522 - L1PA5 LINE L1 -3 6151 1 410 287 96 0 chr2 198200152 198200267 -55056316 - L2 LINE L2 -1 3271 3146 688 282 107 0 chr2 198200481 198200697 -55055886 - L2 LINE L2 -977 2337 2099 1668 160 25 0 chr2 198200755 198201036 -55055547 + MER47A DNA MER2_type 7 294 -72 2028 150 3 39 chr2 198201050 198201274 -55055309 - L1PA16 LINE L1 -33 6133 5925 2102 122 14 7 chr2 198201274 198201570 -55055013 + AluSx SINE Alu 1 298 -14 2028 150 3 39 chr2 198201570 198201704 -55054879 - L1PA16 LINE L1 -241 5925 5788 * 4153 176 25 17 chr2 198201701 198203274 -55053309 + L1PB4 LINE L1 4324 5911 -245 2092 132 14 0 chr2 198203274 198203570 -55053013 - AluSx SINE Alu -12 300 1 4153 176 25 17 chr2 198203570 198203613 -55052970 + L1PB4 LINE L1 5911 5952 -204 339 167 15 0 chr2 198203612 198203678 -55052905 - L1 LINE L1 -1827 4376 4310 * 5532 257 37 20 chr2 198203677 198206127 -55050456 - L1PBb LINE L1 -3217 2986 395 264 350 25 42 chr2 198206290 198206530 -55050053 - L1PBb LINE L1 -5847 357 122 8791 49 2 1 chr2 198206707 198207775 -55048808 - MER11C LTR ERVK -2 1069 1 510 154 0 0 chr2 198208279 198208357 -55048226 + MER47A DNA MER2_type 288 365 -1 1546 206 30 31 chr2 198208394 198208785 -55047798 + MLT1E3 LTR MaLR 200 624 0 489 247 70 38 chr2 198209076 198209262 -55047321 + MLT1J LTR MaLR 78 269 -242 305 32 16 48 chr2 198209303 198209365 -55047218 + (CAAAAA)n Simple_repeat Simple_repeat 1 60 0 241 111 28 0 chr2 198209368 198209404 -55047179 + MLT1J1 LTR MaLR 283 319 -127 2642 77 14 6 chr2 198209996 198210348 -55046235 + THE1A LTR MaLR 1 355 0 1881 149 62 174 chr2 198210747 198211460 -55045123 - LTR8 LTR ERV1 0 691 95 659 275 130 39 chr2 198211629 198212044 -55044539 + MLT1J LTR MaLR 9 461 -50 236 259 37 15 chr2 198212211 198212346 -55044237 + L1MDa LINE L1 2436 2573 -3967 239 192 39 67 chr2 198212351 198212455 -55044128 + L1MDa LINE L1 2649 2749 -3791 228 295 43 14 chr2 198212457 198212596 -55043987 + L1MDa LINE L1 2723 2865 -3675 244 225 28 0 chr2 198212654 198212725 -55043858 + L1M4 LINE L1 4220 4292 -1854 1063 221 27 34 chr2 198212730 198213024 -55043559 + L1M4 LINE L1 4419 4710 -1436 * 1668 260 56 22 chr2 198213014 198213637 -55042946 - L1M4 LINE L1 -1941 5016 4373 16776 165 32 10 chr2 198213651 198214986 -55041597 - L1PB1 LINE L1 -3 6864 5561 2199 102 3 20 chr2 198214986 198215291 -55041292 - AluSq SINE Alu -13 300 1 16776 165 32 10 chr2 198215291 198216952 -55039631 - L1PB1 LINE L1 -1306 5561 3939 2261 88 3 3 chr2 198216952 198217247 -55039336 - AluSx SINE Alu -17 295 1 16776 165 32 10 chr2 198217247 198217513 -55039070 - L1PB1 LINE L1 -2928 3939 3680 2131 126 0 0 chr2 198217513 198217834 -55038749 - AluSx SINE Alu 0 321 1 16776 165 32 10 chr2 198217834 198221264 -55035319 - L1PB1 LINE L1 -3187 3680 1 1631 245 46 49 chr2 198221272 198221696 -55034887 - L1M4 LINE L1 -2570 4387 3964 2070 158 3 0 chr2 198221696 198222007 -55034576 - AluSx SINE Alu 0 312 1 1631 245 46 49 chr2 198222007 198222381 -55034202 - L1M4 LINE L1 -2993 3964 3591 431 272 61 11 chr2 198222410 198222590 -55033993 - L1M4 LINE L1 -4578 2560 2372 243 286 0 98 chr2 198223440 198223552 -55033031 + MLT1K LTR MaLR 207 307 -281 1610 220 113 42 chr2 198223554 198224488 -55032095 - L1M4 LINE L1 -4731 2228 1209 233 358 18 9 chr2 198224553 198224662 -55031921 - L1M4 LINE L1 -5668 1187 1078 351 329 13 7 chr2 198225025 198225174 -55031409 - L1M4 LINE L1 -6618 241 92 776 58 0 0 chr2 198225384 198225487 -55031096 + L1PA4 LINE L1 6049 6151 -4 316 306 137 33 chr2 198225916 198226223 -55030360 - L1M4 LINE L1 -1650 4496 4158 23 0 0 0 chr2 198226485 198226508 -55030075 + AT_rich Low_complexity Low_complexity 1 23 0 2045 123 3 13 chr2 198226517 198226817 -55029766 + AluSx SINE Alu 1 297 -15 703 301 32 91 chr2 198226864 198227066 -55029517 + L2 LINE L2 2476 2643 -671 1323 32 0 0 chr2 198227066 198227222 -55029361 + L1PA3 LINE L1 6000 6155 0 703 301 32 91 chr2 198227222 198227428 -55029155 + L2 LINE L2 2643 2860 -454 3648 109 176 3 chr2 198227849 198228436 -55028147 - LTR12 LTR ERV1 0 688 1 2127 72 38 20 chr2 198229301 198229594 -55026989 + AluY SINE Alu 1 298 -13 2246 93 0 7 chr2 198229675 198229976 -55026607 + AluY SINE Alu 1 299 -12 2248 254 107 17 chr2 198230102 198230617 -55025966 + Charlie2a DNA MER1_type 1 468 -2394 2175 111 0 3 chr2 198230617 198230914 -55025669 + AluSx SINE Alu 1 296 -16 2248 254 107 17 chr2 198230914 198231362 -55025221 + Charlie2a DNA MER1_type 468 1096 -1766 578 167 38 65 chr2 198231390 198231576 -55025007 + Charlie2a DNA MER1_type 2271 2451 -411 3132 263 193 48 chr2 198231579 198231669 -55024914 - L2 LINE L2 -6 3307 3231 372 22 0 0 chr2 198231669 198231714 -55024869 + (CA)n Simple_repeat Simple_repeat 1 45 0 3132 263 193 48 chr2 198231714 198233432 -55023151 - L2 LINE L2 -82 3231 1218 300 221 0 23 chr2 198233432 198233518 -55023065 + Charlie2 DNA MER1_type 2370 2453 -409 559 164 35 0 chr2 198233689 198233805 -55022778 - L1MA7 LINE L1 -11 6484 6365 10091 232 28 54 chr2 198233811 198233989 -55022594 - L1MA7 LINE L1 -832 5518 5337 1925 139 3 16 chr2 198233989 198234298 -55022285 - AluSq SINE Alu -7 306 2 10091 232 28 54 chr2 198234298 198235077 -55021506 - L1MA7 LINE L1 -1013 5337 4540 1045 175 34 0 chr2 198235077 198235254 -55021329 - AluJb SINE Alu -20 292 110 10091 232 28 54 chr2 198235254 198236432 -55020151 - L1MA7 LINE L1 -1810 4540 3333 2251 91 0 11 chr2 198236432 198236754 -55019829 - AluY SINE Alu 0 321 3 10091 232 28 54 chr2 198236754 198237127 -55019456 - L1MA7 LINE L1 -3017 3333 2952 1794 189 21 21 chr2 198237127 198237502 -55019081 - THE1C LTR MaLR 0 375 1 8807 141 20 45 chr2 198237502 198239123 -55017460 - THE1C-int LTR MaLR 0 1580 1 1946 139 52 30 chr2 198239123 198239490 -55017093 - THE1C LTR MaLR 0 375 1 10091 232 28 54 chr2 198239490 198242955 -55013628 - L1MA7 LINE L1 -3395 2955 1 868 227 69 4 chr2 198243121 198243398 -55013185 + Charlie2 DNA MER1_type 2488 2782 -80 283 327 10 0 chr2 198243403 198243504 -55013079 - L1M4 LINE L1 -1185 4961 4860 2385 134 46 106 chr2 198243552 198244097 -55012486 - L1MB3 LINE L1 -43 6140 5629 527 345 42 22 chr2 198244413 198244755 -55011828 + LTR16B LTR ERVL 1 348 -102 2316 179 31 7 chr2 198244755 198245173 -55011410 - MSTC LTR MaLR 0 428 1 299 335 152 0 chr2 198245531 198245695 -55010888 + MIR SINE MIR 57 245 -17 22 0 0 0 chr2 198245983 198246005 -55010578 + AT_rich Low_complexity Low_complexity 1 22 0 285 29 0 0 chr2 198246735 198246769 -55009814 + (TA)n Simple_repeat Simple_repeat 1 34 0 495 194 0 0 chr2 198247242 198247345 -55009238 + (TA)n Simple_repeat Simple_repeat 2 104 0 239 363 60 42 chr2 198247855 198248306 -55008277 + L2 LINE L2 2336 2868 -446 435 266 13 51 chr2 198248352 198248510 -55008073 - L1ME1 LINE L1 -19 6147 5996 398 370 21 11 chr2 198248532 198248721 -55007862 + LTR16B LTR ERVL 107 297 -167 555 230 36 0 chr2 198248721 198248860 -55007723 - L1MC4 LINE L1 -2055 5987 5844 356 284 0 0 chr2 198249198 198249279 -55007304 + MER58 DNA MER1_type 134 2419 -1 226 219 24 37 chr2 198249323 198249405 -55007178 - LTR50 LTR ERVL -2 793 713 360 304 75 38 chr2 198249522 198249714 -55006869 - LTR33A LTR ERVL -361 162 17 235 225 70 28 chr2 198249714 198249785 -55006798 + L2 LINE L2 3199 3272 0 638 290 88 60 chr2 198251677 198251995 -55004588 + L1ME4a LINE L1 5366 5707 -414 2296 95 3 0 chr2 198251995 198252291 -55004292 - AluSp SINE Alu -16 297 1 638 290 88 60 chr2 198252291 198252507 -55004076 + L1ME4a LINE L1 5707 5915 -206 995 209 11 6 chr2 198252517 198252699 -55003884 - MER58A DNA MER1_type 0 224 42 442 326 60 28 chr2 198253686 198253904 -55002679 - L2 LINE L2 -660 2654 2430 186 374 49 25 chr2 198253985 198254148 -55002435 - L2 LINE L2 -274 2998 2832 24 0 0 0 chr2 198256092 198256116 -55000467 + AT_rich Low_complexity Low_complexity 1 24 0 638 26 0 0 chr2 198256900 198256977 -54999606 + L1PA5 LINE L1 6073 6149 -5 23 0 0 0 chr2 198256977 198257000 -54999583 + AT_rich Low_complexity Low_complexity 1 23 0 234 0 0 0 chr2 198257418 198257444 -54999139 + (A)n Simple_repeat Simple_repeat 1 26 0 2087 116 0 28 chr2 198257446 198257764 -54998819 + AluSx SINE Alu 1 309 -3 497 274 0 14 chr2 198257782 198257928 -54998655 - L1MC5 LINE L1 -46 7915 7772 261 249 24 91 chr2 198257939 198258042 -54998541 - L1ME1 LINE L1 -5 6161 6072 2244 84 28 0 chr2 198258042 198258327 -54998256 + AluSg SINE Alu 1 293 -17 261 249 24 91 chr2 198258327 198258388 -54998195 - L1ME1 LINE L1 -94 6072 6008 273 157 20 0 chr2 198258397 198258448 -54998135 - MER66B LTR ERV1 -140 346 295 1957 216 60 2 chr2 198258449 198258899 -54997684 - L1ME1 LINE L1 -142 6024 5549 198 0 0 0 chr2 198261764 198261786 -54994797 + (TTTC)n Simple_repeat Simple_repeat 1 22 0 1189 80 6 6 chr2 198261787 198261963 -54994620 + (TTC)n Simple_repeat Simple_repeat 2 177 0 2170 104 0 20 chr2 198261966 198262264 -54994319 - AluSx SINE Alu -20 292 1 192 294 118 0 chr2 198262342 198262393 -54994190 + MIR SINE MIR 32 88 -174 3451 92 12 2 chr2 198262408 198262889 -54993694 - L1PA14 LINE L1 -1 6160 5675 12287 173 10 5 chr2 198263022 198266161 -54990422 - L1PA14 LINE L1 -1 7598 4439 215 255 0 0 chr2 198266161 198266208 -54990375 + MIR SINE MIR 214 260 -2 21070 135 14 8 chr2 198266251 198269747 -54986836 - L1PA14 LINE L1 -4069 3515 1 407 262 145 14 chr2 198269753 198269898 -54986685 + MIR SINE MIR 97 260 -2 942 203 91 117 chr2 198269997 198270460 -54986123 + Charlie4a DNA MER1_type 28 478 -30 341 341 36 52 chr2 198270484 198270792 -54985791 + L2 LINE L2 2675 2977 -337 1242 161 37 75 chr2 198271693 198272041 -54984542 + LTR56 LTR ERV1 1 335 -110 447 267 48 7 chr2 198272101 198272247 -54984336 + LTR23 LTR ERV1 286 437 0 469 285 80 75 chr2 198272301 198272690 -54983893 + L1MC/D LINE L1 4882 5272 -874 619 273 123 23 chr2 198272703 198273003 -54983580 + L1MC/D LINE L1 5297 5626 -2182 446 311 149 28 chr2 198273056 198273304 -54983279 + MLT1L LTR MaLR 330 607 -8 986 257 150 13 chr2 198273532 198273906 -54982677 - MER57B LTR ERV1 0 434 10 281 170 0 0 chr2 198274665 198274712 -54981871 + MIR SINE MIR 107 153 -109 2088 73 0 11 chr2 198275309 198275626 -54980957 - AluY SINE Alu 0 325 12 253 236 57 66 chr2 198277931 198278037 -54978546 + MER72 LTR ERV1 372 476 -246 476 210 146 63 chr2 198278067 198278272 -54978311 + LTR45 LTR ERV1 304 525 0 2588 114 3 8 chr2 198278284 198278661 -54977922 + THE1C LTR MaLR 1 375 0 4909 128 73 58 chr2 198278661 198279604 -54976979 + THE1C-int LTR MaLR 1 957 -623 327 194 11 72 chr2 198279641 198279821 -54976762 + C-rich Low_complexity Low_complexity 5 173 0 295 116 0 29 chr2 198279828 198279897 -54976686 + (CCCCCA)n Simple_repeat Simple_repeat 3 69 0 3239 120 10 20 chr2 198280416 198280916 -54975667 - MER41E LTR ERV1 0 512 18 342 366 103 34 chr2 198281060 198281322 -54975261 + L2 LINE L2 2940 3219 -53 4291 52 4 5 chr2 198281355 198281907 -54974676 + L1PA2 LINE L1 5605 6155 0 181 345 44 35 chr2 198284251 198284364 -54972219 + L2 LINE L2 3195 3308 -5 243 267 17 0 chr2 198284364 198284424 -54972159 + GA-rich Low_complexity Low_complexity 3 63 0 2855 117 63 2 chr2 198284955 198285401 -54971182 + L1PB3 LINE L1 5679 6151 -3 216 219 0 0 chr2 198285402 198285443 -54971140 + (TA)n Simple_repeat Simple_repeat 1 41 0 21 36 0 0 chr2 198286007 198286035 -54970548 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr2 198289555 198289590 -54966993 + AT_rich Low_complexity Low_complexity 1 35 0 565 270 190 19 chr2 198290849 198291060 -54965523 + MIR SINE MIR 4 250 -12 3114 163 19 84 chr2 198291297 198291674 -54964909 - MER82 DNA MER2_type 0 653 342 1242 129 33 0 chr2 198291674 198291884 -54964699 + L1MB3 LINE L1 5960 6176 -7 3114 163 19 84 chr2 198291884 198292204 -54964379 - MER82 DNA MER2_type -311 342 2 255 406 0 10 chr2 198293107 198293203 -54963380 + MIR3 SINE MIR 12 106 -102 436 314 25 0 chr2 198293243 198293364 -54963219 - L2 LINE L2 0 3313 3190 444 231 25 0 chr2 198293431 198293552 -54963031 - Charlie1 DNA MER1_type 0 2761 2638 1004 240 9 9 chr2 198293565 198293782 -54962801 - Charlie1 DNA MER1_type -2540 221 5 1038 136 7 7 chr2 198294334 198294488 -54962095 + AluSx SINE Alu 1 154 -158 312 258 72 31 chr2 198294637 198294734 -54961849 + L2 LINE L2 3143 3243 -29 2123 116 0 16 chr2 198294746 198295049 -54961534 - AluSx SINE Alu -14 298 1 305 328 0 0 chr2 198295401 198295520 -54961063 + G-rich Low_complexity Low_complexity 1 119 0 716 186 0 0 chr2 198295587 198295711 -54960872 + Tigger3(Golem) DNA MER2_type 2850 2973 -56 30 77 0 0 chr2 198295821 198295886 -54960697 + AT_rich Low_complexity Low_complexity 1 65 0 369 300 93 40 chr2 198295948 198296204 -54960379 + L1M4 LINE L1 2271 2512 -3634 2209 120 22 11 chr2 198296204 198296563 -54960020 + L1PA16 LINE L1 5804 6166 0 369 300 93 40 chr2 198296563 198297140 -54959443 + L1M4 LINE L1 2512 3149 -2997 292 242 144 23 chr2 198297514 198297646 -54958937 - MER112 DNA MER1_type -95 165 18 200 128 0 26 chr2 198297673 198297712 -54958871 + (TAAAAA)n Simple_repeat Simple_repeat 3 40 0 256 200 0 0 chr2 198297756 198297806 -54958777 - L1M4 LINE L1 -1599 4547 4498 209 225 0 0 chr2 198297841 198297881 -54958702 + MER5B DNA MER1_type 1 40 -138 2171 89 38 3 chr2 198297904 198298195 -54958388 + AluSx SINE Alu 1 301 -11 2245 102 0 10 chr2 198298504 198298807 -54957776 + AluSc SINE Alu 1 300 -9 198 152 0 0 chr2 198298942 198298975 -54957608 + L2 LINE L2 3188 3220 -93 2878 126 0 11 chr2 198299291 198299735 -54956848 - L1PA16 LINE L1 -201 5965 5527 1711 139 186 12 chr2 198299736 198299772 -54956811 - Tigger2 DNA MER2_type -1009 1709 1681 2424 72 3 10 chr2 198299772 198300077 -54956506 - AluSx SINE Alu -7 305 3 1711 139 186 12 chr2 198300077 198300363 -54956220 - Tigger2 DNA MER2_type -1037 1681 1331 2559 254 154 18 chr2 198300465 198300911 -54955672 - L1MDb LINE L1 -4048 2348 1964 949 224 29 5 chr2 198300911 198301121 -54955462 - MER20 DNA MER1_type -4 215 1 2559 254 154 18 chr2 198301121 198301944 -54954639 - L1MDb LINE L1 -4432 1964 849 1251 124 64 20 chr2 198301949 198302151 -54954432 - AluSq SINE Alu -16 297 87 21 36 0 0 chr2 198302197 198302225 -54954358 + AT_rich Low_complexity Low_complexity 1 28 0 641 134 10 0 chr2 198302229 198302326 -54954257 - AluSq SINE Alu -212 100 3 475 313 103 31 chr2 198302328 198302753 -54953830 - L1MDb LINE L1 -5491 905 450 637 242 82 14 chr2 198302912 198303131 -54953452 - L1MDb LINE L1 -6127 269 36 544 256 232 26 chr2 198303214 198303640 -54952943 + L1MC/D LINE L1 5274 5787 -2021 579 272 40 45 chr2 198303801 198304003 -54952580 + L2 LINE L2 2260 2460 -854 284 276 98 8 chr2 198304119 198304242 -54952341 - MIR SINE MIR -1 261 128 2188 116 0 0 chr2 198304254 198304546 -54952037 + AluSx SINE Alu 1 292 -20 315 0 0 0 chr2 198304582 198304617 -54951966 + (TG)n Simple_repeat Simple_repeat 1 35 0 231 36 0 0 chr2 198304616 198304644 -54951939 + (GA)n Simple_repeat Simple_repeat 1 28 0 * 518 250 45 86 chr2 198305023 198305243 -54951340 - L2 LINE L2 -86 3186 2976 231 247 39 26 chr2 198305227 198305304 -54951279 + MIR SINE MIR 175 252 -10 * 234 291 0 0 chr2 198305358 198305413 -54951170 - L2 LINE L2 -8 3305 3251 952 164 85 108 chr2 198305740 198306347 -54950236 + LTR49 LTR ERV1 1 720 -67 3616 130 139 25 chr2 198306542 198307188 -54949395 + MER72 LTR ERV1 3 722 0 562 294 96 10 chr2 198307358 198307555 -54949028 - MIR SINE MIR -38 224 11 999 86 19 12 chr2 198307661 198307823 -54948760 - L1MA8 LINE L1 -4 6287 6125 1893 121 36 0 chr2 198307823 198308104 -54948479 + AluJb SINE Alu 1 291 -21 1414 197 51 66 chr2 198308144 198308596 -54947987 - LTR56 LTR ERV1 0 445 1 278 305 38 48 chr2 198308608 198308713 -54947870 - MIR SINE MIR -155 107 4 412 232 101 42 chr2 198308713 198308817 -54947766 - MER5B DNA MER1_type 0 178 59 2230 119 0 0 chr2 198308817 198309119 -54947464 - AluSx SINE Alu -10 302 1 412 232 101 42 chr2 198309119 198309182 -54947401 - MER5B DNA MER1_type -119 59 1 262 341 11 0 chr2 198309447 198309535 -54947048 + MIR SINE MIR 28 116 -146 1387 282 60 39 chr2 198311262 198311882 -54944701 - ERVL LTR ERVL -414 5350 4718 777 339 20 3 chr2 198312014 198312362 -54944221 - ERVL LTR ERVL -1511 4253 3900 195 290 56 75 chr2 198312813 198312920 -54943663 - MIR SINE MIR -63 145 41 496 263 0 38 chr2 198313566 198313699 -54942884 + MIR3 SINE MIR 78 205 -3 186 43 0 0 chr2 198313975 198313998 -54942585 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 921 224 144 4 chr2 198314974 198315224 -54941359 + MLT1F LTR MaLR 58 342 -200 437 270 87 32 chr2 198315545 198315730 -54940853 + L2 LINE L2 3119 3313 0 206 333 0 0 chr2 198316411 198316468 -54940115 + L3 LINE CR1 1519 1575 -2 412 233 53 0 chr2 198316542 198316675 -54939908 - L1ME4a LINE L1 -9 6112 5973 2641 133 61 2 chr2 198316905 198317332 -54939251 + LTR47A LTR ERVL 1 452 0 262 344 28 22 chr2 198317373 198317553 -54939030 - L1ME LINE L1 -513 5608 5428 23 54 0 0 chr2 198317702 198317739 -54938844 + AT_rich Low_complexity Low_complexity 1 37 0 2353 78 0 33 chr2 198317867 198318174 -54938409 + AluSx SINE Alu 1 297 -15 500 275 88 29 chr2 198319048 198319219 -54937364 - MIR SINE MIR -62 200 20 2315 87 3 0 chr2 198319669 198319957 -54936626 + AluSg SINE Alu 1 289 -21 1682 193 22 16 chr2 198320044 198320407 -54936176 + MLT1A1 LTR MaLR 1 365 0 1442 204 72 23 chr2 198320499 198321047 -54935536 - MLT2F LTR ERVL -42 621 1 1024 194 78 123 chr2 198321379 198321761 -54934822 - MLT1A1 LTR MaLR 0 365 1 2101 89 24 0 chr2 198321791 198322082 -54934501 - L1PA11 LINE L1 -3 6171 5874 2249 116 3 52 chr2 198322082 198322469 -54934114 - Tigger1 DNA MER2_type -256 2162 1795 911 123 7 14 chr2 198322473 198322641 -54933942 + FLAM_C SINE Alu 7 173 0 10501 120 31 32 chr2 198322646 198324456 -54932127 - Tigger1 DNA MER2_type -609 1809 1 520 344 78 76 chr2 198324565 198325359 -54931224 + L1MEd LINE L1 44 839 -5280 5410 147 29 1 chr2 198325415 198326298 -54930285 + L1P4 LINE L1 1 908 -5941 11591 196 18 16 chr2 198326301 198329236 -54927347 + L1P4 LINE L1 3079 6024 -845 1652 194 7 3 chr2 198329236 198329535 -54927048 + AluJb SINE Alu 1 300 -12 11591 196 18 16 chr2 198329535 198330005 -54926578 + L1P4 LINE L1 6024 6492 -377 393 348 43 14 chr2 198330559 198330700 -54925883 + L2 LINE L2 3128 3272 0 459 266 101 43 chr2 198331919 198332107 -54924476 + MIR SINE MIR 40 238 -24 373 253 0 0 chr2 198332623 198332702 -54923881 - MIR3 SINE MIR -54 154 76 2193 123 3 0 chr2 198332883 198333183 -54923400 - AluSx SINE Alu -11 301 1 21 0 0 0 chr2 198333511 198333532 -54923051 + AT_rich Low_complexity Low_complexity 1 21 0 1000 235 6 0 chr2 198334643 198334826 -54921757 - MER5A DNA MER1_type 0 189 6 21 36 0 0 chr2 198335291 198335319 -54921264 + AT_rich Low_complexity Low_complexity 1 28 0 204 97 0 0 chr2 198336378 198336409 -54920174 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 1742 92 0 0 chr2 198336613 198336840 -54919743 - AluY SINE Alu 0 311 85 436 260 102 41 chr2 198337144 198337609 -54918974 - L1 LINE L1 -2008 4138 3615 21 0 0 0 chr2 198337661 198337682 -54918901 + AT_rich Low_complexity Low_complexity 1 21 0 668 284 49 31 chr2 198338330 198338657 -54917926 + LTR16C LTR ERVL 159 491 0 403 201 59 118 chr2 198339116 198339172 -54917411 - HAL1 LINE L1 -863 1644 1586 2313 63 0 3 chr2 198339172 198339483 -54917100 - AluY SINE Alu 0 310 1 403 201 59 118 chr2 198339483 198339679 -54916904 - HAL1 LINE L1 -921 1586 1406 344 218 8 0 chr2 198339842 198339975 -54916608 + GA-rich Low_complexity Low_complexity 1 134 0 378 0 0 0 chr2 198339988 198340030 -54916553 + (TA)n Simple_repeat Simple_repeat 2 43 0 2842 13 0 0 chr2 198340035 198340346 -54916237 - AluYa5 SINE Alu 0 311 1 1546 210 94 6 chr2 198340901 198341263 -54915320 - MSTD LTR MaLR -2 394 1 611 273 0 14 chr2 198341665 198341833 -54914750 + MIR SINE MIR 2 167 -41 9425 35 4 0 chr2 198342659 198343858 -54912725 + L1P LINE L1 3199 4402 -1744 3705 120 42 7 chr2 198343858 198344458 -54912125 - LTR9B LTR ERV1 -23 621 1 1565 194 6 6 chr2 198344458 198344763 -54911820 + Tigger6a DNA MER2_type 298 602 -481 1923 133 18 15 chr2 198344763 198345094 -54911489 + MER1B DNA MER1_type 1 332 -7 2186 200 27 2 chr2 198345100 198345579 -54911004 + Tigger6a DNA MER2_type 593 1083 0 1977 152 10 0 chr2 198345841 198346138 -54910445 - AluJo SINE Alu -10 302 3 216 86 0 0 chr2 198346604 198346639 -54909944 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1795 158 17 24 chr2 198347538 198347829 -54908754 - AluJo SINE Alu -13 299 11 2341 194 20 24 chr2 198348426 198348936 -54907647 + MLT2B3 LTR ERVL 1 508 -46 1489 167 44 0 chr2 198348946 198349216 -54907367 - Tigger3b DNA MER2_type 0 1231 950 1279 175 19 0 chr2 198349226 198349432 -54907151 + AluJo SINE Alu 72 281 -31 2692 134 15 11 chr2 198349433 198350070 -54906513 - Tigger3b DNA MER2_type -489 742 1 2397 94 3 3 chr2 198350738 198351047 -54905536 + AluSc SINE Alu 1 309 0 309 235 0 0 chr2 198352535 198352603 -54903980 - MER113 DNA MER1_type? 0 521 454 21 57 0 0 chr2 198352693 198352728 -54903855 + AT_rich Low_complexity Low_complexity 1 35 0 229 271 52 0 chr2 198353879 198353975 -54902608 - L1ME LINE L1 -302 5819 5719 295 299 103 9 chr2 198354755 198354862 -54901721 - MIR3 SINE MIR -14 194 78 409 200 0 33 chr2 198355729 198355819 -54900764 + MER21B LTR ERV1 1 87 -776 2651 225 109 28 chr2 198355844 198356626 -54899957 + MER21B LTR ERV1 19 863 0 5645 147 79 22 chr2 198356637 198357702 -54898881 + L1MA7 LINE L1 4223 5226 -1065 2357 48 7 7 chr2 198357702 198357991 -54898592 + AluY SINE Alu 21 309 -2 5645 147 79 22 chr2 198357991 198358849 -54897734 + L1MA7 LINE L1 5226 6288 -3 384 260 205 0 chr2 198360045 198360172 -54896411 + MER5A DNA MER1_type 37 189 0 958 239 45 9 chr2 198360295 198360517 -54896066 + MIR SINE MIR 12 241 -21 3088 111 4 26 chr2 198360982 198361450 -54895133 - LTR22A LTR ERVK 0 458 1 202 271 219 13 chr2 198361602 198361753 -54894830 - L2 LINE L2 -842 2472 2291 256 355 103 34 chr2 198363287 198363549 -54893034 + L2 LINE L2 224 503 -2811 329 215 94 0 chr2 198363620 198363710 -54892873 + MIR SINE MIR 92 189 -61 284 301 245 44 chr2 198363712 198364124 -54892459 - L2 LINE L2 0 3313 2819 2296 117 56 8 chr2 198364153 198364511 -54892072 - THE1C LTR MaLR 0 375 1 10346 102 39 35 chr2 198364511 198366085 -54890498 - THE1C-int LTR MaLR 0 1580 1 2558 114 5 8 chr2 198366085 198366461 -54890122 - THE1C LTR MaLR 0 375 1 409 196 108 57 chr2 198366473 198366631 -54889952 - LTR45 LTR ERV1 0 525 324 238 226 57 66 chr2 198366709 198366815 -54889768 - MER72 LTR ERV1 -246 476 372 3026 124 10 20 chr2 198367422 198367922 -54888661 - MER41E LTR ERV1 0 512 18 363 355 107 38 chr2 198368065 198368327 -54888256 + L2 LINE L2 2940 3219 -53 4756 15 0 0 chr2 198368360 198368921 -54887662 + L1PA2 LINE L1 5605 6165 0 23 33 0 0 chr2 198368921 198368951 -54887632 + AT_rich Low_complexity Low_complexity 1 30 0 25 83 0 0 chr2 198369153 198369213 -54887370 + AT_rich Low_complexity Low_complexity 1 60 0 654 209 80 70 chr2 198369296 198369421 -54887162 - L1MC4a LINE L1 -1811 5997 5875 2162 110 7 3 chr2 198369421 198369713 -54886870 + AluSq SINE Alu 1 293 -20 654 209 80 70 chr2 198369713 198369725 -54886858 - L1MC4a LINE L1 -1933 5875 5865 1401 190 74 22 chr2 198369725 198369994 -54886589 + AluJo SINE Alu 1 283 -19 654 209 80 70 chr2 198369994 198370142 -54886441 - L1MC4a LINE L1 -1943 5865 5708 1655 176 91 0 chr2 198370201 198370519 -54886064 + MER7A DNA MER2_type 1 345 -1 228 186 0 0 chr2 198370545 198370604 -54885979 + (TA)n Simple_repeat Simple_repeat 1 59 0 237 290 110 0 chr2 198370604 198370704 -54885879 - L1MC4a LINE L1 -2150 5658 5548 12188 175 13 13 chr2 198370732 198373677 -54882906 - L1PB1 LINE L1 -1 6866 3923 2478 88 3 0 chr2 198373677 198373985 -54882598 - AluSp SINE Alu 0 313 5 12188 175 13 13 chr2 198373985 198374682 -54881901 - L1PB1 LINE L1 -2944 3923 3227 916 187 77 29 chr2 198374680 198374926 -54881657 - L1PB1 LINE L1 -6007 856 599 * 1005 283 72 10 chr2 198374938 198375437 -54881146 - L1PB1 LINE L1 -6312 551 22 720 258 67 4 chr2 198375519 198375786 -54880797 - L1MC4a LINE L1 -2258 5550 5267 3237 101 26 0 chr2 198375935 198376399 -54880184 - L1PA10 LINE L1 0 6168 5693 1987 127 42 23 chr2 198376446 198376753 -54879830 + AluSq SINE Alu 1 313 0 740 201 0 0 chr2 198376768 198376902 -54879681 + AluJo SINE Alu 1 134 -178 405 291 88 59 chr2 198376948 198377619 -54878964 - L1MC4a LINE L1 -1089 5057 4407 2473 80 0 0 chr2 198377619 198377921 -54878662 - AluY SINE Alu -9 302 1 405 291 88 59 chr2 198377921 198378536 -54878047 - L1MC4a LINE L1 -1739 4407 3736 345 227 68 12 chr2 198379443 198379554 -54877029 - MLT1H LTR MaLR -376 173 14 298 362 133 0 chr2 198380237 198380447 -54876136 - L2 LINE L2 -1715 1599 1362 321 257 73 97 chr2 198380545 198380751 -54875832 + L1M4 LINE L1 4458 4658 -1488 244 318 40 12 chr2 198380831 198381004 -54875579 + L1M4 LINE L1 4771 4948 -1198 649 294 96 12 chr2 198381277 198381819 -54874764 + L1PA7 LINE L1 5264 5846 -308 458 171 86 19 chr2 198381836 198381941 -54874642 - MIR SINE MIR -70 192 81 243 0 0 0 chr2 198382094 198382121 -54874462 + (CA)n Simple_repeat Simple_repeat 2 28 0 3911 40 43 0 chr2 198382578 198383048 -54873535 + LTR2B LTR ERV1 1 490 0 338 323 64 24 chr2 198383601 198383852 -54872731 - L2 LINE L2 -2905 409 149 2647 48 0 0 chr2 198387879 198388190 -54868393 + AluY SINE Alu 1 311 0 268 314 0 0 chr2 198388282 198388352 -54868231 - L2 LINE L2 -1 3271 3202 21 0 0 0 chr2 198388400 198388421 -54868162 + AT_rich Low_complexity Low_complexity 1 21 0 1736 167 21 3 chr2 198388979 198389267 -54867316 + AluJb SINE Alu 1 293 -19 27 0 0 0 chr2 198389291 198389318 -54867265 + AT_rich Low_complexity Low_complexity 1 27 0 474 270 52 19 chr2 198389584 198389795 -54866788 - L1ME LINE L1 -426 5736 5519 22 0 0 0 chr2 198389850 198389872 -54866711 + AT_rich Low_complexity Low_complexity 1 22 0 2053 138 0 0 chr2 198389881 198390193 -54866390 + AluSx SINE Alu 1 312 0 842 273 70 8 chr2 198390196 198390628 -54865955 + L1MEd LINE L1 898 1257 -4862 314 351 40 0 chr2 198390890 198391038 -54865545 + L1MEd LINE L1 3317 3470 -2659 216 0 0 0 chr2 198391044 198391068 -54865515 + (T)n Simple_repeat Simple_repeat 1 24 0 744 268 129 35 chr2 198391107 198391768 -54864815 + L1MEd LINE L1 3563 4285 -1844 1976 139 95 21 chr2 198391794 198392132 -54864451 - THE1B LTR MaLR -1 363 1 11749 87 2 19 chr2 198392132 198393738 -54862845 - THE1B-int LTR MaLR 0 1580 1 1882 151 98 21 chr2 198393738 198394076 -54862507 - THE1B LTR MaLR 0 364 1 389 56 0 0 chr2 198394690 198394744 -54861839 - MADE1 DNA Mariner -26 54 1 815 157 28 44 chr2 198394746 198395044 -54861539 - MLT1A1 LTR MaLR -24 350 5 187 211 53 0 chr2 198396264 198396302 -54860281 + L2 LINE L2 1367 1406 -1908 469 298 149 43 chr2 198397393 198397557 -54859026 + MIR SINE MIR 2 200 -62 2027 133 0 7 chr2 198397557 198397865 -54858718 + AluSx SINE Alu 1 306 -6 469 298 149 43 chr2 198397865 198397935 -54858648 + MIR SINE MIR 200 261 -1 231 359 141 0 chr2 198398309 198398451 -54858132 - L3 LINE CR1 -67 1510 1349 251 91 45 0 chr2 198398458 198398502 -54858081 + LTR10B LTR ERV1 6 51 -496 2461 135 103 22 chr2 198398524 198399028 -54857555 + LTR10A LTR ERV1 1 545 -64 305 312 121 0 chr2 198399047 198399188 -54857395 - L3 LINE CR1 -231 1346 1189 256 374 41 8 chr2 198399661 198399784 -54856799 - L2 LINE L2 -8 3264 3138 180 284 128 64 chr2 198400171 198400389 -54856194 + L3 LINE CR1 1022 1253 -324 22 0 0 0 chr2 198400506 198400528 -54856055 + AT_rich Low_complexity Low_complexity 1 22 0 864 212 166 46 chr2 198400535 198400861 -54855722 + MLT1A1 LTR MaLR 1 365 0 2270 94 0 7 chr2 198401077 198401374 -54855209 - AluSg SINE Alu -15 295 1 213 351 13 26 chr2 198402568 198402645 -54853938 + MIR SINE MIR 17 92 -170 2329 100 3 0 chr2 198403852 198404153 -54852430 + AluSq SINE Alu 1 302 -11 289 156 109 0 chr2 198404496 198404560 -54852023 + MIR3 SINE MIR 112 182 -26 24 85 0 0 chr2 198405512 198405571 -54851012 + GC_rich Low_complexity Low_complexity 1 59 0 405 281 113 6 chr2 198406799 198406959 -54849624 - L3 LINE CR1 -47 1530 1354 520 191 20 52 chr2 198407160 198407326 -54849257 + MIR SINE MIR 105 261 -1 188 373 30 0 chr2 198407371 198407438 -54849145 - L3 LINE CR1 -487 1090 1022 363 302 112 18 chr2 198407651 198407820 -54848763 - L3 LINE CR1 -801 776 592 302 318 214 6 chr2 198407855 198408028 -54848555 + MIR SINE MIR 48 256 -6 579 322 118 75 chr2 198408059 198408525 -54848058 - L3 LINE CR1 -1057 520 35 261 200 27 27 chr2 198409972 198410047 -54846536 - MER34 LTR ERV1 0 542 468 2201 115 0 3 chr2 198410682 198410978 -54845605 - AluSx SINE Alu -17 295 1 1824 124 0 0 chr2 198411569 198411819 -54844764 - AluSx SINE Alu -15 297 48 1511 197 28 3 chr2 198412307 198412591 -54843992 + AluJb SINE Alu 4 294 -18 184 200 0 0 chr2 198412949 198412984 -54843599 + L2 LINE L2 3272 3306 -7 1963 232 81 30 chr2 198414813 198415490 -54841093 - L1ME2 LINE L1 -27 6137 5426 2666 219 170 48 chr2 198415513 198415863 -54840720 - L1ME1 LINE L1 -23 6143 5837 2037 129 0 26 chr2 198415863 198416172 -54840411 - AluSx SINE Alu -11 301 1 2666 219 170 48 chr2 198416172 198417180 -54839403 - L1ME1 LINE L1 -329 5837 4954 351 0 0 0 chr2 198417180 198417219 -54839364 + (TG)n Simple_repeat Simple_repeat 2 40 0 2666 219 170 48 chr2 198417219 198419068 -54837515 - L1ME1 LINE L1 -1212 4954 2518 431 131 71 0 chr2 198419114 198419198 -54837385 - L1MC2 LINE L1 0 6344 6255 384 22 0 0 chr2 198419205 198419250 -54837333 + (CA)n Simple_repeat Simple_repeat 2 46 0 3162 188 61 22 chr2 198419263 198419592 -54836991 - L1MC1 LINE L1 -168 6234 5919 1531 150 48 65 chr2 198419592 198419885 -54836698 - AluJo SINE Alu -24 288 1 3162 188 61 22 chr2 198419885 198420736 -54835847 - L1MC1 LINE L1 -483 5919 4964 392 251 131 24 chr2 198420737 198420971 -54835612 - L1MC1 LINE L1 -3937 2278 2060 578 268 105 14 chr2 198420973 198421402 -54835181 - L1MC1 LINE L1 -5059 1146 679 566 188 21 76 chr2 198421432 198421576 -54835007 + MER58A DNA MER1_type 28 163 0 1410 158 89 72 chr2 198421576 198421924 -54834659 - MLT1A1 LTR MaLR 0 365 12 279 253 23 0 chr2 198422396 198422483 -54834100 - L1MC1 LINE L1 -6209 187 99 224 289 82 0 chr2 198422598 198422695 -54833888 - L3 LINE CR1 -297 1280 1176 1753 165 34 3 chr2 198423086 198423383 -54833200 + AluJb SINE Alu 1 306 -6 808 219 167 0 chr2 198423926 198424118 -54832465 - MER58A DNA MER1_type 0 224 1 223 314 29 9 chr2 198427102 198427207 -54829376 + (TGAA)n Simple_repeat Simple_repeat 3 109 0 274 224 71 35 chr2 198428503 198428588 -54827995 + MIR3 SINE MIR 108 195 -13 29 84 0 0 chr2 198428656 198428727 -54827856 + AT_rich Low_complexity Low_complexity 1 71 0 1307 200 125 7 chr2 198429509 198429814 -54826769 - MER58B DNA MER1_type 0 341 1 466 189 57 0 chr2 198430622 198430728 -54825855 + L1MD2 LINE L1 6227 6338 -21 2373 76 13 3 chr2 198431571 198431874 -54824709 + AluY SINE Alu 1 306 -5 1966 145 0 0 chr2 198432326 198432640 -54823943 + AluSx SINE Alu 1 314 0 432 275 42 14 chr2 198432926 198433068 -54823515 - L2 LINE L2 -2123 1191 1046 670 120 283 52 chr2 198433342 198433533 -54823050 - MER46A DNA MER2_type -1 235 1 1101 290 212 33 chr2 198433707 198435768 -54820815 + L2 LINE L2 763 3217 -96 401 313 100 22 chr2 198435992 198436222 -54820361 + L2 LINE L2 2460 2707 -607 528 280 63 63 chr2 198436288 198436606 -54819977 + L2 LINE L2 2995 3312 -1 929 271 40 12 chr2 198436672 198436923 -54819660 + MIR SINE MIR 5 262 0 294 279 0 0 chr2 198437328 198437396 -54819187 - MIR SINE MIR -59 149 82 271 221 70 0 chr2 198437572 198437658 -54818925 + L1ME4a LINE L1 6026 6117 -4 462 352 14 7 chr2 198439149 198439433 -54817150 + BaEV-int LTR ERV1 718 1003 -6782 850 275 47 81 chr2 198439629 198440415 -54816168 + BaEV-int LTR ERV1 1290 2048 -5737 524 169 113 0 chr2 198440477 198440601 -54815982 + LTR18B LTR ERVL 336 473 -141 412 214 103 28 chr2 198440584 198440729 -54815854 + LTR18B LTR ERVL 225 380 -234 * 212 353 0 30 chr2 198440733 198440866 -54815717 + GA-rich Low_complexity Low_complexity 1 129 0 393 155 188 46 chr2 198441206 198441425 -54815158 - Charlie8 DNA MER1_type -1003 1414 60 2045 121 4 0 chr2 198441949 198442222 -54814361 + AluSx SINE Alu 21 294 -18 596 361 0 0 chr2 198442270 198442558 -54814025 + BaEV-int LTR ERV1 4322 4609 -2040 269 266 11 11 chr2 198442821 198442915 -54813668 + BaEV-int LTR ERV1 4762 4855 -1794 259 237 0 0 chr2 198443791 198443850 -54812733 + BaEV-int LTR ERV1 5827 5885 -764 323 298 192 13 chr2 198445940 198446091 -54810492 + MIR SINE MIR 2 179 -83 1604 192 130 85 chr2 198446260 198447009 -54809574 + LTR1B LTR ERV1 1 981 -39 6225 65 2 0 chr2 198447205 198448008 -54808575 + L1PA7 LINE L1 5348 6152 -2 709 144 18 0 chr2 198448010 198448121 -54808462 - FLAM_A SINE Alu -17 116 4 246 288 45 0 chr2 198448135 198448201 -54808382 + L2 LINE L2 3188 3256 -16 3327 137 27 0 chr2 198448522 198449070 -54807513 + L1PA5 LINE L1 13 575 -5571 * 23188 50 16 4 chr2 198449063 198451041 -54805542 + L1PA5 LINE L1 2189 4142 -2012 2571 68 3 0 chr2 198451041 198451351 -54805232 + AluSp SINE Alu 1 311 -2 23188 50 16 4 chr2 198451351 198453286 -54803297 + L1PA5 LINE L1 4142 6151 -3 290 65 87 0 chr2 198453862 198453908 -54802675 + MLT2B1 LTR ERVL 471 520 0 2203 90 0 0 chr2 198455154 198455433 -54801150 + AluSg SINE Alu 13 291 -19 735 244 135 13 chr2 198455450 198455761 -54800822 + L1ME3A LINE L1 3498 3846 -2300 868 246 45 31 chr2 198455765 198456118 -54800465 + L1M4 LINE L1 4821 5178 -968 846 211 40 70 chr2 198456136 198456463 -54800120 + L1ME3A LINE L1 3873 4189 -1957 309 263 11 21 chr2 198456421 198456516 -54800067 + GA-rich Low_complexity Low_complexity 2 95 0 * 2045 124 7 3 chr2 198456647 198456929 -54799654 + AluSx SINE Alu 7 289 -23 237 207 78 9 chr2 198456941 198457057 -54799526 + L1ME3A LINE L1 4321 4444 -1702 570 198 120 1 chr2 198457082 198457339 -54799244 + MER68 LTR ERV1 183 492 -70 323 153 17 0 chr2 198457339 198457398 -54799185 + MADE1 DNA Mariner 2 61 -19 2453 77 3 0 chr2 198457404 198457714 -54798869 + AluY SINE Alu 1 311 0 438 194 0 0 chr2 198457727 198457799 -54798784 + MER68 LTR ERV1 491 562 0 236 218 55 0 chr2 198457799 198457854 -54798729 - HAL1 LINE L1 -955 1552 1495 1634 238 81 52 chr2 198457895 198458027 -54798556 + L1ME3A LINE L1 5082 5209 -961 1896 155 90 3 chr2 198458027 198458362 -54798221 + THE1B LTR MaLR 1 364 0 1634 238 81 52 chr2 198458362 198458602 -54797981 + L1ME3A LINE L1 5209 5441 -729 2084 122 3 0 chr2 198458602 198458889 -54797694 + AluSq SINE Alu 1 288 -25 1634 238 81 52 chr2 198458889 198459310 -54797273 + L1ME3A LINE L1 5441 5940 -230 1905 98 61 4 chr2 198459310 198459574 -54797009 + AluSx SINE Alu 17 295 -17 1634 238 81 52 chr2 198459574 198459676 -54796907 + L1ME3A LINE L1 5940 6038 -132 386 93 0 0 chr2 198459691 198459745 -54796838 - LTR3b LTR ERVK 0 500 447 1988 161 39 55 chr2 198459745 198460181 -54796402 - LTR3 LTR ERVK 0 429 1 262 319 176 40 chr2 198460384 198460657 -54795926 + L2 LINE L2 2887 3196 -76 1596 244 97 13 chr2 198461812 198462360 -54794223 - L1ME2 LINE L1 0 6164 5571 6260 91 18 14 chr2 198462412 198463195 -54793388 - L1PA8 LINE L1 -33 6139 5360 2028 136 0 3 chr2 198463195 198463489 -54793094 - AluSg SINE Alu -17 293 1 6260 91 18 14 chr2 198463489 198464374 -54792209 - L1PA8 LINE L1 -812 5360 4461 2236 123 0 0 chr2 198464374 198464676 -54791907 - AluSq SINE Alu -11 302 1 15161 130 32 5 chr2 198464679 198467352 -54789231 - L1PA8 LINE L1 -2448 3698 952 2824 77 42 0 chr2 198467356 198467757 -54788826 + HERVL-A1 LTR ERVL 5237 5654 0 2937 86 23 7 chr2 198467757 198468186 -54788397 + MLT2A1 LTR ERVL 1 436 -8 2062 141 0 7 chr2 198468412 198468718 -54787865 + AluJb SINE Alu 1 304 -8 204 179 0 0 chr2 198468857 198468896 -54787687 + (TA)n Simple_repeat Simple_repeat 1 39 0 21 36 0 0 chr2 198469887 198469915 -54786668 + AT_rich Low_complexity Low_complexity 1 28 0 2099 126 0 0 chr2 198470450 198470744 -54785839 + AluSx SINE Alu 17 310 -2 268 270 159 8 chr2 198471225 198471351 -54785232 - L3 LINE CR1 -14 1563 1419 755 360 61 24 chr2 198471460 198471999 -54784584 - L3 LINE CR1 -384 1193 635 429 226 130 14 chr2 198472184 198472392 -54784191 - HAL1 LINE L1 -1152 1355 1124 1246 151 93 34 chr2 198472462 198472753 -54783830 + Tigger1 DNA MER2_type 2110 2417 -1 491 290 226 33 chr2 198473069 198473307 -54783276 - HAL1 LINE L1 -1852 655 464 2161 133 7 0 chr2 198473307 198473615 -54782968 + AluSx SINE Alu 1 310 -2 491 290 226 33 chr2 198473615 198473924 -54782659 - HAL1 LINE L1 -2043 464 2 227 216 40 14 chr2 198474737 198474811 -54781772 + MER3 DNA MER1_type 133 208 -1 241 356 13 74 chr2 198474850 198474999 -54781584 + L2 LINE L2 2857 2996 -317 237 291 35 0 chr2 198475870 198475956 -54780627 - MIR SINE MIR 0 262 174 200 250 17 17 chr2 198476262 198476322 -54780261 - MIR SINE MIR -101 161 102 22 0 0 0 chr2 198476402 198476424 -54780159 + AT_rich Low_complexity Low_complexity 1 22 0 452 257 52 15 chr2 198476679 198476815 -54779768 - MIR SINE MIR -108 154 14 2134 105 18 0 chr2 198477633 198477919 -54778664 + AluSx SINE Alu 1 291 -21 572 279 108 31 chr2 198478334 198478592 -54777991 + L2 LINE L2 2659 2936 -378 1332 294 146 32 chr2 198478592 198478848 -54777735 + L2 LINE L2 1959 2184 -1088 1802 176 47 24 chr2 198478848 198479229 -54777354 + MLT1B LTR MaLR 1 390 0 1332 294 146 32 chr2 198479229 198479540 -54777043 + L2 LINE L2 2184 2458 -814 1098 134 34 43 chr2 198479540 198479749 -54776834 + MER3 DNA MER1_type 3 209 0 1332 294 146 32 chr2 198479749 198480153 -54776430 + L2 LINE L2 2458 3041 -231 2831 263 103 38 chr2 198480190 198480555 -54776028 + L1MEc LINE L1 35 375 -6021 189 0 0 0 chr2 198480555 198480576 -54776007 + (GA)n Simple_repeat Simple_repeat 1 21 0 2831 263 103 38 chr2 198480576 198480603 -54775980 + L1MEc LINE L1 375 399 -5997 1972 154 53 14 chr2 198480603 198480961 -54775622 - THE1C LTR MaLR -3 372 1 2831 263 103 38 chr2 198480961 198482048 -54774535 + L1MEc LINE L1 399 1611 -4785 568 241 121 11 chr2 198482049 198482331 -54774252 + L1MEc LINE L1 3111 3423 -2792 980 194 50 22 chr2 198482331 198482672 -54773911 - MSTD LTR MaLR 0 396 9 2165 135 143 8 chr2 198482727 198483104 -54773479 + MSTA LTR MaLR 1 428 0 484 163 0 11 chr2 198483111 198483203 -54773380 + MSTA-int LTR MaLR 8 98 -1553 354 169 12 48 chr2 198483195 198483278 -54773305 - L1 LINE L1 -936 5210 5131 * 242 182 55 0 chr2 198483282 198483337 -54773246 + THE1-int LTR MaLR 1190 1247 -333 3228 189 16 4 chr2 198483363 198484046 -54772537 - L1 LINE L1 -1010 5136 4446 444 19 0 0 chr2 198484046 198484099 -54772484 + (TG)n Simple_repeat Simple_repeat 2 54 0 967 214 0 0 chr2 198484105 198484287 -54772296 - AluJb SINE Alu -32 280 99 1835 156 48 11 chr2 198484287 198484665 -54771918 - L1 LINE L1 -1696 4450 4059 2344 204 146 40 chr2 198484675 198485552 -54771031 + L1M4 LINE L1 4026 4995 -1151 207 236 14 14 chr2 198486288 198486360 -54770223 + (TA)n Simple_repeat Simple_repeat 1 72 0 400 301 42 7 chr2 198486360 198486503 -54770080 + L2 LINE L2 2770 2917 -397 270 81 0 0 chr2 198486890 198486927 -54769656 + (GAAAA)n Simple_repeat Simple_repeat 2 38 0 1459 261 91 106 chr2 198487998 198489001 -54767582 + L2 LINE L2 1913 2900 -414 1995 235 70 52 chr2 198489080 198489562 -54767021 - L1ME3A LINE L1 -49 6121 5649 2400 95 0 16 chr2 198489562 198489877 -54766706 + AluSx SINE Alu 1 310 -2 1995 235 70 52 chr2 198489877 198490430 -54766153 - L1ME3A LINE L1 -521 5649 5053 319 270 89 37 chr2 198490477 198490747 -54765836 - L1ME3A LINE L1 -2742 3404 3121 493 271 89 10 chr2 198490764 198490967 -54765616 - L1ME3A LINE L1 -3274 2872 2654 1967 161 0 0 chr2 198491156 198491460 -54765123 - AluSx SINE Alu -8 304 1 23 0 0 0 chr2 198491473 198491496 -54765087 + AT_rich Low_complexity Low_complexity 1 23 0 2008 136 3 0 chr2 198491496 198491783 -54764800 - AluSq SINE Alu -25 288 1 203 83 83 0 chr2 198491791 198491827 -54764756 + T-rich Low_complexity Low_complexity 1 39 0 1919 142 40 7 chr2 198491921 198492223 -54764360 - AluSx SINE Alu 0 312 1 312 348 80 37 chr2 198492649 198492836 -54763747 + L1MEd LINE L1 561 755 -5364 330 137 0 0 chr2 198493478 198493529 -54763054 - MER66B LTR ERV1 -141 345 295 6577 61 36 6 chr2 198493573 198494962 -54761621 + L1PA8 LINE L1 4756 6170 -2 23 33 0 0 chr2 198494995 198495025 -54761558 + AT_rich Low_complexity Low_complexity 1 30 0 26 50 0 0 chr2 198495720 198495760 -54760823 + AT_rich Low_complexity Low_complexity 1 40 0 711 318 81 46 chr2 198495777 198496009 -54760574 + L2 LINE L2 2345 2567 -747 2156 117 3 7 chr2 198496009 198496316 -54760267 - AluSx SINE Alu -6 306 1 711 318 81 46 chr2 198496316 198496675 -54759908 + L2 LINE L2 2567 2957 -357 479 315 103 48 chr2 198496756 198497029 -54759554 + L2 LINE L2 2974 3261 -11 2420 100 0 0 chr2 198497837 198498148 -54758435 + AluSx SINE Alu 1 311 -1 1518 176 96 0 chr2 198498556 198498828 -54757755 - AluJo SINE Alu -14 298 1 21 0 0 0 chr2 198498879 198498900 -54757683 + AT_rich Low_complexity Low_complexity 1 21 0 2146 170 102 6 chr2 198499298 198499786 -54756797 - MER34C LTR ERV1 -18 567 33 7416 130 35 11 chr2 198500098 198501128 -54755455 + HSMAR2 DNA Mariner 1 1068 -234 2066 180 84 2 chr2 198501128 198501522 -54755061 + MSTB LTR MaLR 1 426 0 7416 130 35 11 chr2 198501522 198501762 -54754821 + HSMAR2 DNA Mariner 1068 1301 -1 579 248 77 55 chr2 198502336 198502694 -54753889 + MER93a LTR ERV1 49 402 0 648 228 43 49 chr2 198502816 198502938 -54753645 + MER5A DNA MER1_type 2 124 -65 2190 113 3 0 chr2 198502938 198503230 -54753353 - AluSx SINE Alu -19 293 1 648 228 43 49 chr2 198503230 198503291 -54753292 + MER5A DNA MER1_type 124 184 -5 293 203 125 0 chr2 198503353 198503417 -54753166 - MER5B DNA MER1_type 0 178 107 452 88 0 0 chr2 198503417 198503485 -54753098 + Alu SINE Alu 235 302 -10 355 268 0 79 chr2 198503485 198503612 -54752971 - MER5B DNA MER1_type -61 117 1 1791 139 131 31 chr2 198503675 198504064 -54752519 - MSTC LTR MaLR 0 428 1 1151 205 119 42 chr2 198504064 198504260 -54752323 - MSTC-int LTR MaLR 0 1651 1471 4790 44 5 3 chr2 198504260 198504850 -54751733 + LTR10C LTR ERV1 1 591 0 1151 205 119 42 chr2 198504850 198505057 -54751526 - MSTC-int LTR MaLR -180 1471 1217 4088 136 22 6 chr2 198505062 198505752 -54750831 + MER50 LTR ERV1 5 705 -29 3492 227 50 43 chr2 198505837 198506949 -54749634 - MSTC-int LTR MaLR -614 1121 2 1231 207 133 50 chr2 198506951 198507371 -54749212 - MSTB2 LTR MaLR 0 457 3 788 168 0 0 chr2 198507736 198507867 -54748716 - MER46A DNA MER2_type -95 141 11 1584 168 172 16 chr2 198507868 198508300 -54748283 + LTR10A LTR ERV1 1 548 -61 307 182 0 0 chr2 198508325 198508380 -54748203 + MER46A DNA MER2_type 180 234 -2 844 107 44 38 chr2 198508510 198508669 -54747914 - MER105 DNA DNA -5 199 40 339 156 89 67 chr2 198508669 198508759 -54747824 - MER5A DNA MER1_type -6 183 92 263 235 0 0 chr2 198508775 198508826 -54747757 - MER105 DNA DNA -153 51 1 26 30 0 0 chr2 198509277 198509310 -54747273 + AT_rich Low_complexity Low_complexity 1 33 0 236 71 18 107 chr2 198510386 198510442 -54746141 + (CCTA)n Simple_repeat Simple_repeat 1 51 0 1956 191 22 48 chr2 198510491 198510570 -54746013 + MER39 LTR ERV1 259 339 -368 1948 155 20 0 chr2 198510570 198510866 -54745717 - AluSx SINE Alu -8 304 3 1956 191 22 48 chr2 198510866 198511247 -54745336 + MER39 LTR ERV1 339 707 0 288 0 0 0 chr2 198511754 198511786 -54744797 + (TG)n Simple_repeat Simple_repeat 2 33 0 2129 130 7 0 chr2 198511795 198512088 -54744495 - AluSx SINE Alu -17 295 1 21 36 0 0 chr2 198512243 198512271 -54744312 + AT_rich Low_complexity Low_complexity 1 28 0 1458 184 25 32 chr2 198512601 198512884 -54743699 + AluJo SINE Alu 1 281 -31 430 266 32 11 chr2 198512900 198513088 -54743495 + L1M4 LINE L1 4496 4687 -1459 2079 137 7 0 chr2 198513559 198513866 -54742717 + AluSx SINE Alu 3 311 -1 2272 92 0 3 chr2 198514613 198514905 -54741678 - AluSx SINE Alu -21 291 1 579 322 118 75 chr2 198516566 198517032 -54739551 + L3 LINE CR1 35 520 -1057 302 318 214 6 chr2 198517063 198517236 -54739347 - MIR SINE MIR -6 256 48 363 302 112 18 chr2 198517271 198517440 -54739143 + L3 LINE CR1 592 776 -801 188 373 30 0 chr2 198517653 198517720 -54738863 + L3 LINE CR1 1022 1090 -487 520 191 20 52 chr2 198517765 198517931 -54738652 - MIR SINE MIR -1 261 105 405 281 113 6 chr2 198518132 198518292 -54738291 + L3 LINE CR1 1354 1530 -47 314 189 11 84 chr2 198519374 198519469 -54737114 + AluJb SINE Alu 210 297 -5 433 263 34 11 chr2 198519470 198519649 -54736934 + L1M4 LINE L1 4505 4687 -1459 2091 134 7 0 chr2 198520120 198520427 -54736156 + AluSx SINE Alu 3 311 -1 2272 92 0 3 chr2 198521174 198521466 -54735117 - AluSx SINE Alu -21 291 1 1502 191 39 11 chr2 198522028 198522310 -54734273 + AluJb SINE Alu 1 290 -22 360 339 172 43 chr2 198522478 198522873 -54733710 - L2 LINE L2 -3 3269 2824 189 224 52 35 chr2 198522939 198522997 -54733586 + L2 LINE L2 3213 3271 -1 1903 133 4 0 chr2 198523262 198523532 -54733051 - AluSx SINE Alu -3 309 39 1970 125 7 24 chr2 198523603 198523899 -54732684 - AluSx SINE Alu -21 291 1 207 0 0 0 chr2 198523966 198523989 -54732594 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2066 95 0 4 chr2 198524496 198524770 -54731813 + AluSq SINE Alu 39 311 -2 296 83 21 0 chr2 198525295 198525343 -54731240 + (TA)n Simple_repeat Simple_repeat 1 49 0 250 313 147 64 chr2 198526087 198526496 -54730087 + L3 LINE CR1 354 796 -781 1390 135 160 28 chr2 198526544 198526863 -54729720 - MER46B DNA MER2_type 0 236 1 216 335 71 52 chr2 198526909 198527064 -54729519 + L3 LINE CR1 954 1111 -466 561 276 180 5 chr2 198527148 198527365 -54729218 - MIR SINE MIR -6 256 2 2492 57 0 10 chr2 198527427 198527725 -54728858 + AluY SINE Alu 1 295 -16 553 275 52 24 chr2 198527727 198527938 -54728645 + L3 LINE CR1 1244 1460 -117 198 343 149 30 chr2 198528641 198528842 -54727741 - L2 LINE L2 -240 3032 2808 6501 78 24 11 chr2 198529043 198530332 -54726251 - L1PA8 LINE L1 -17 6155 4855 5434 123 39 13 chr2 198530960 198532243 -54724340 - L1PA13 LINE L1 0 6163 4851 2446 206 129 127 chr2 198532771 198532918 -54723665 + L1MC3 LINE L1 5990 6135 -1650 1418 153 56 90 chr2 198532918 198533296 -54723287 - MLT1A1 LTR MaLR 0 365 1 2446 206 129 127 chr2 198533296 198533377 -54723206 + L1MC3 LINE L1 6135 6214 -1571 2908 203 56 23 chr2 198533377 198534076 -54722507 - MER72 LTR ERV1 0 722 1 2446 206 129 127 chr2 198534076 198534939 -54721644 + L1MC3 LINE L1 6214 7181 -604 315 212 14 37 chr2 198534939 198535033 -54721550 + MLT1F1 LTR MaLR 42 156 -393 2446 206 129 127 chr2 198535033 198535484 -54721099 + L1MC3 LINE L1 7181 7630 -155 2109 150 56 31 chr2 198535484 198535897 -54720686 - MSTC LTR MaLR 0 428 6 464 118 0 0 chr2 198535949 198536017 -54720566 - MLT1B LTR MaLR -6 384 317 210 337 65 33 chr2 198536196 198536288 -54720295 + MIR3 SINE MIR 5 99 -109 23 33 0 0 chr2 198536333 198536363 -54720220 + AT_rich Low_complexity Low_complexity 1 30 0 1287 185 69 3 chr2 198536570 198536939 -54719644 - MLT1C LTR MaLR -53 414 1 353 160 67 76 chr2 198536942 198537061 -54719522 + L1MC3 LINE L1 7687 7995 0 835 258 90 26 chr2 198537691 198538001 -54718582 + LTR40c LTR ERVL 110 439 -26 1865 169 27 30 chr2 198538004 198538370 -54718213 + MLT1A1 LTR MaLR 1 365 0 1668 187 28 0 chr2 198538684 198538973 -54717610 + AluJo SINE Alu 7 303 -9 228 111 0 0 chr2 198539300 198539336 -54717247 + (TC)n Simple_repeat Simple_repeat 1 36 0 2471 151 16 23 chr2 198539628 198540059 -54716524 + MSTC LTR MaLR 1 428 0 478 239 26 8 chr2 198540178 198540295 -54716288 + MIR SINE MIR 31 149 -113 398 243 110 66 chr2 198540309 198540581 -54716002 - MER46C DNA MER2_type -49 289 6 239 358 0 0 chr2 198540581 198540662 -54715921 + MIR SINE MIR 156 236 -26 192 286 0 0 chr2 198540804 198540846 -54715737 - L2 LINE L2 -16 3256 3215 2057 61 8 19 chr2 198540847 198541111 -54715472 - AluY SINE Alu -14 297 37 1878 185 31 31 chr2 198541138 198541696 -54714887 + MLT2A2 LTR ERVL 1 554 0 445 352 71 6 chr2 198541696 198541878 -54714705 - MIR SINE MIR -65 197 4 2076 153 20 15 chr2 198542217 198542672 -54713911 + L1MC2 LINE L1 5525 6098 -246 633 297 65 3 chr2 198542758 198543064 -54713519 + L1ME3 LINE L1 5496 5820 -301 252 276 112 22 chr2 198543247 198543381 -54713202 + L1ME3 LINE L1 6003 6148 -14 346 248 105 8 chr2 198543404 198543537 -54713046 + L1ME3A LINE L1 5988 6133 -37 223 233 0 0 chr2 198544059 198544102 -54712481 + MER5B DNA MER1_type 1 43 -135 1692 101 0 0 chr2 198544105 198544323 -54712260 + AluSq SINE Alu 1 218 -95 2577 116 168 18 chr2 198544323 198544834 -54711749 + LTR10E LTR ERV1 1 588 -45 642 79 34 0 chr2 198544864 198544953 -54711630 + AluSg/x SINE Alu 212 303 -7 607 146 32 32 chr2 198544954 198545077 -54711506 + MER5B DNA MER1_type 30 152 -26 903 136 0 0 chr2 198545567 198545714 -54710869 + (TA)n Simple_repeat Simple_repeat 2 148 0 2164 105 0 0 chr2 198545781 198546067 -54710516 - AluSx SINE Alu -26 286 1 2257 88 0 14 chr2 198546243 198546539 -54710044 - AluY SINE Alu -19 292 1 877 172 61 11 chr2 198546612 198546792 -54709791 + MER5A DNA MER1_type 1 189 0 197 327 183 20 chr2 198547077 198547279 -54709304 - L2 LINE L2 -839 2475 2241 1531 168 82 10 chr2 198547421 198547712 -54708871 - AluJb SINE Alu 0 312 1 462 249 73 27 chr2 198547785 198548024 -54708559 + Charlie8 DNA MER1_type 84 1427 -990 1373 198 79 25 chr2 198548211 198548489 -54708094 - AluJo SINE Alu -18 294 2 2279 105 0 6 chr2 198549100 198549414 -54707169 - AluSx SINE Alu 0 312 1 663 205 139 0 chr2 198552235 198552386 -54704197 + MER45A DNA AcHobo 6 177 -1 296 298 73 60 chr2 198552388 198552539 -54704044 + MIR SINE MIR 65 217 -45 365 320 88 22 chr2 198552688 198552916 -54703667 - L1MC4 LINE L1 -1 8041 7799 2102 194 38 79 chr2 198552925 198553151 -54703432 - L1ME2 LINE L1 -10 6154 5920 1752 174 0 27 chr2 198553151 198553449 -54703134 - AluJo SINE Alu -22 290 1 2102 194 38 79 chr2 198553449 198553852 -54702731 - L1ME2 LINE L1 -244 5920 5551 3480 175 71 38 chr2 198553873 198554805 -54701778 + L1MB8 LINE L1 5202 6163 -15 777 170 135 0 chr2 198554815 198555015 -54701568 - L1ME2 LINE L1 -636 5528 5302 466 174 0 0 chr2 198555023 198555109 -54701474 - AluSp SINE Alu -8 305 220 1140 94 7 0 chr2 198555109 198555258 -54701325 - AluSp SINE Alu -163 150 1 1286 213 202 24 chr2 198555313 198555768 -54700815 - MLT1F LTR MaLR -6 536 1 817 175 122 44 chr2 198556036 198556288 -54700295 + MER33 DNA MER1_type 1 281 -2304 2017 110 3 33 chr2 198556288 198556589 -54699994 + AluSq SINE Alu 1 292 -21 817 175 122 44 chr2 198556589 198556633 -54699950 + MER33 DNA MER1_type 281 320 -4 205 370 68 10 chr2 198556687 198556879 -54699704 + L2 LINE L2 2815 3017 -255 249 33 0 0 chr2 198556972 198557002 -54699581 + (TC)n Simple_repeat Simple_repeat 1 30 0 616 237 8 0 chr2 198557022 198557140 -54699443 - FLAM_A SINE Alu -14 119 1 191 360 13 13 chr2 198559155 198559230 -54697353 - L2 LINE L2 -172 3100 3026 216 300 0 29 chr2 198559335 198559405 -54697178 - L2 LINE L2 -560 2754 2687 261 200 0 71 chr2 198559975 198560060 -54696523 + L1ME4a LINE L1 5989 6067 -54 21 57 0 0 chr2 198560539 198560574 -54696009 + AT_rich Low_complexity Low_complexity 1 35 0 6690 187 30 8 chr2 198560696 198562240 -54694343 + L1PB4 LINE L1 3634 5212 -934 520 144 0 9 chr2 198562362 198562473 -54694110 + L1PB4 LINE L1 5219 5328 -818 509 130 9 96 chr2 198562476 198562591 -54693992 + FRAM SINE Alu 71 175 -1 367 130 0 0 chr2 198562591 198562660 -54693923 + L1PB4 LINE L1 5322 5390 -776 3681 159 33 17 chr2 198562662 198563353 -54693230 + L1PB4 LINE L1 5455 6156 0 2187 110 0 7 chr2 198564033 198564325 -54692258 + AluY SINE Alu 2 291 -20 1248 179 0 63 chr2 198564695 198564947 -54691636 - MER8 DNA MER2_type -2 237 2 2126 133 0 13 chr2 198566799 198567099 -54689484 - AluSx SINE Alu -16 296 1 347 238 186 29 chr2 198567352 198567524 -54689059 + L1ME4a LINE L1 5809 6007 -114 2814 100 68 7 chr2 198567611 198568052 -54688531 - L1PA8 LINE L1 -2 6170 5703 23 54 0 0 chr2 198568434 198568471 -54688112 + AT_rich Low_complexity Low_complexity 1 37 0 610 320 81 32 chr2 198569636 198569983 -54686600 - LTR33 LTR ERVL -157 364 1 3024 154 71 96 chr2 198570002 198570183 -54686400 - MER44D DNA MER2_type -1886 601 417 1880 165 30 0 chr2 198570183 198570486 -54686097 + AluJo SINE Alu 1 312 0 3024 154 71 96 chr2 198570486 198571052 -54685531 - MER44D DNA MER2_type -2070 417 1 21 0 0 0 chr2 198571260 198571281 -54685302 + AT_rich Low_complexity Low_complexity 1 21 0 525 292 113 24 chr2 198571299 198571635 -54684948 - L1ME4a LINE L1 -57 6064 5699 2423 132 60 5 chr2 198571653 198572055 -54684528 + MSTB LTR MaLR 1 424 -2 352 197 26 0 chr2 198572105 198572181 -54684402 + MER58 DNA MER1_type 128 2410 -10 481 271 0 36 chr2 198572185 198572351 -54684232 - L1ME4a LINE L1 -472 5649 5490 637 249 72 17 chr2 198572820 198573001 -54683582 + MIR SINE MIR 33 223 -39 205 365 132 14 chr2 198573024 198573243 -54683340 - L2 LINE L2 -339 2975 2731 2115 116 3 0 chr2 198573296 198573612 -54682971 + AluSx SINE Alu 2 318 0 274 236 94 0 chr2 198573668 198573774 -54682809 - HAL1 LINE L1 -109 2398 2283 368 291 109 89 chr2 198574916 198575477 -54681106 + L1M2 LINE L1 678 1249 -5600 2175 105 0 22 chr2 198577004 198577318 -54679265 + AluSx SINE Alu 6 312 0 1837 173 16 0 chr2 198577886 198578192 -54678391 - AluJb SINE Alu -1 311 1 2453 82 0 0 chr2 198578295 198578598 -54677985 - AluY SINE Alu -8 303 1 25 75 0 0 chr2 198578682 198578735 -54677848 + AT_rich Low_complexity Low_complexity 1 53 0 24 77 0 0 chr2 198578878 198578930 -54677653 + AT_rich Low_complexity Low_complexity 1 52 0 2295 85 0 0 chr2 198579143 198579457 -54677126 + AluSx SINE Alu 1 314 0 2139 135 30 0 chr2 198579666 198580036 -54676547 - L1MB3 LINE L1 -7 6176 5796 334 281 23 127 chr2 198580066 198580287 -54676296 - MIR3 SINE MIR -7 201 4 2068 138 3 3 chr2 198580443 198580740 -54675843 + AluSx SINE Alu 1 297 -15 2171 123 3 0 chr2 198581138 198581430 -54675153 - AluSx SINE Alu -17 295 3 2264 259 69 18 chr2 198582621 198583420 -54673163 - L1ME3A LINE L1 -7 6163 5324 245 253 46 23 chr2 198583420 198583507 -54673076 - L2 LINE L2 -249 3023 2935 251 292 58 44 chr2 198584167 198584304 -54672279 - Tigger8 DNA MER2_type -499 167 29 672 272 63 25 chr2 198584827 198585066 -54671517 - MIR SINE MIR -4 258 11 1432 206 44 15 chr2 198585648 198585988 -54670595 + MLT1B LTR MaLR 3 352 -38 189 0 0 0 chr2 198586213 198586234 -54670349 + (TG)n Simple_repeat Simple_repeat 1 21 0 1124 220 54 4 chr2 198586357 198586598 -54669985 + MIR SINE MIR 7 259 -3 197 343 55 48 chr2 198586763 198586909 -54669674 + MER5B DNA MER1_type 27 173 -5 * 456 331 7 14 chr2 198586787 198586926 -54669657 - MER5A DNA MER1_type -50 139 2 664 138 8 16 chr2 198587104 198587227 -54669356 + L1PA13 LINE L1 6042 6163 0 416 271 109 30 chr2 198588580 198588883 -54667700 - L1ME4a LINE L1 -5 6116 5790 371 316 121 21 chr2 198588925 198589210 -54667373 - L1ME4a LINE L1 -426 5695 5382 2260 92 23 13 chr2 198589360 198589664 -54666919 - AluSx SINE Alu -5 307 1 1169 92 0 0 chr2 198589664 198589805 -54666778 - AluSq/x SINE Alu -171 141 1 309 233 35 95 chr2 198589855 198589971 -54666612 + MIR SINE MIR 46 154 -108 2186 135 0 0 chr2 198590305 198590608 -54665975 + AluJb SINE Alu 1 303 -9 1760 84 0 0 chr2 198590649 198590874 -54665709 + AluY SINE Alu 87 311 0 370 171 57 0 chr2 198591763 198591851 -54664732 - L1ME4a LINE L1 -27 6094 6002 256 274 89 28 chr2 198591912 198592091 -54664492 - L1ME4a LINE L1 -68 6053 5864 1009 231 60 20 chr2 198592296 198592547 -54664036 - MIR SINE MIR 0 262 2 243 284 147 32 chr2 198594419 198594514 -54662069 + MIR3 SINE MIR 82 187 -21 1792 116 8 4 chr2 198594515 198594765 -54661818 - AluSx SINE Alu -5 307 57 312 248 211 8 chr2 198595173 198595306 -54661277 - L2 LINE L2 -441 2873 2714 1800 152 0 0 chr2 198595532 198595795 -54660788 + AluSx SINE Alu 38 300 -12 2054 211 34 0 chr2 198596002 198596419 -54660164 - MLT1F1 LTR MaLR -44 523 93 5927 31 0 0 chr2 198596713 198597414 -54659169 - L1PA4 LINE L1 0 6155 5455 3272 41 14 0 chr2 198597414 198597890 -54658693 + L1PA4 LINE L1 4961 5440 -715 1193 105 0 17 chr2 198600596 198600777 -54655806 + L1PA10 LINE L1 5979 6156 -12 22 70 0 0 chr2 198601190 198601233 -54655350 + AT_rich Low_complexity Low_complexity 1 43 0 385 264 88 49 chr2 198601249 198601636 -54654947 - L1ME4a LINE L1 -44 6077 5676 1667 172 33 30 chr2 198601761 198602063 -54654520 - AluJo SINE Alu -9 303 1 348 24 0 0 chr2 198604459 198604500 -54652083 + (TG)n Simple_repeat Simple_repeat 1 41 0 679 249 47 16 chr2 198604594 198604787 -54651796 + MIR SINE MIR 26 221 -41 1923 173 0 3 chr2 198604967 198605274 -54651309 + AluJb SINE Alu 1 306 -6 1287 184 61 105 chr2 198606633 198607024 -54649559 - MLT1A2 LTR MaLR 0 374 1 1014 191 162 21 chr2 198608084 198608319 -54648264 - AluJo SINE Alu -19 293 26 2435 265 149 5 chr2 198608321 198609407 -54647176 - HAL1 LINE L1 -160 2347 1140 466 227 148 0 chr2 198609425 198609553 -54647030 - L1ME3A LINE L1 -61 6109 5963 5494 200 63 28 chr2 198609554 198610829 -54645754 - L1MD1 LINE L1 -8 6628 5400 2316 87 7 0 chr2 198610829 198611127 -54645456 - AluSp SINE Alu -13 300 1 5494 200 63 28 chr2 198611127 198612320 -54644263 - L1MD1 LINE L1 -1236 5400 4067 4791 197 92 54 chr2 198612318 198612982 -54643601 - L1MD1 LINE L1 -4638 1902 1264 * 1047 182 22 0 chr2 198612982 198613163 -54643420 - L1PB4 LINE L1 -6 6150 5966 4791 197 92 54 chr2 198613163 198614221 -54642362 - L1MD1 LINE L1 -5276 1264 12 2374 109 0 0 chr2 198614221 198614525 -54642058 - AluSq SINE Alu -9 304 1 1565 229 127 0 chr2 198614534 198614961 -54641622 - L1ME3A LINE L1 -202 5968 5488 991 166 41 0 chr2 198614962 198615131 -54641452 - MER46A DNA MER2_type 0 236 61 1898 146 7 0 chr2 198615148 198615466 -54641117 - AluSq SINE Alu 0 320 1 819 249 25 45 chr2 198615466 198615721 -54640862 - L1ME3A LINE L1 -676 5486 5227 198 0 0 0 chr2 198615721 198615743 -54640840 + (TG)n Simple_repeat Simple_repeat 2 23 0 819 249 25 45 chr2 198615743 198615821 -54640762 - L1ME3A LINE L1 -935 5227 5149 2115 104 45 7 chr2 198615821 198616108 -54640475 - AluSx SINE Alu -14 298 1 819 249 25 45 chr2 198616108 198616287 -54640296 - L1ME3A LINE L1 -1013 5149 4987 2083 119 0 42 chr2 198616388 198616700 -54639883 - AluSx SINE Alu -13 299 1 245 235 0 0 chr2 198616706 198616757 -54639826 - MER5A DNA MER1_type -118 71 21 227 326 95 34 chr2 198617369 198617516 -54639067 - MER5B DNA MER1_type -22 156 1 646 178 0 11 chr2 198617577 198617942 -54638641 + CT-rich Low_complexity Low_complexity 1 360 0 672 183 0 0 chr2 198617970 198618433 -54638150 + CT-rich Low_complexity Low_complexity 1 463 0 298 262 24 0 chr2 198618864 198618948 -54637635 + (TA)n Simple_repeat Simple_repeat 1 86 0 570 254 118 60 chr2 198619005 198619278 -54637305 - Charlie8 DNA MER1_type -2132 285 1 1526 158 3 68 chr2 198619355 198619665 -54636918 - AluJb SINE Alu -22 290 1 1719 98 21 0 chr2 198620280 198620514 -54636069 - L1MA1 LINE L1 -4 6298 6060 523 271 23 0 chr2 198621948 198622077 -54634506 + MIR SINE MIR 8 139 -123 2299 92 7 0 chr2 198623454 198623746 -54632837 + AluSc SINE Alu 1 294 -15 408 146 0 0 chr2 198624036 198624125 -54632458 + (CA)n Simple_repeat Simple_repeat 2 90 0 3057 134 108 12 chr2 198624459 198625032 -54631551 - L1MA8 LINE L1 -12 6279 5652 1693 114 8 28 chr2 198625034 198625289 -54631294 - AluJb SINE Alu 0 312 63 2130 95 0 76 chr2 198625528 198625843 -54630740 - AluSx SINE Alu -21 291 1 24 32 0 0 chr2 198625940 198625971 -54630612 + AT_rich Low_complexity Low_complexity 1 31 0 2002 106 0 4 chr2 198626002 198626267 -54630316 - AluSg SINE Alu -15 295 32 1492 229 111 53 chr2 198626519 198626783 -54629800 + L2 LINE L2 2459 2706 -607 4145 144 35 17 chr2 198626783 198627498 -54629085 + L1PB4 LINE L1 5429 6156 0 1492 229 111 53 chr2 198627498 198627623 -54628960 + L2 LINE L2 2706 2822 -491 2139 161 25 17 chr2 198627623 198627983 -54628600 + MLT1A1 LTR MaLR 1 363 -2 1492 229 111 53 chr2 198627983 198628374 -54628209 + L2 LINE L2 2822 3294 -19 1340 162 70 41 chr2 198629233 198629547 -54627036 + MER33 DNA MER1_type 2 324 0 784 213 0 0 chr2 198629717 198629839 -54626744 - FLAM_C SINE Alu -20 123 2 1596 114 64 15 chr2 198629858 198630122 -54626461 - L1MB3 LINE L1 -7 6176 5900 261 0 0 0 chr2 198630125 198630154 -54626429 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 2338 43 4 4 chr2 198630155 198630455 -54626128 - AluY SINE Alu 0 300 1 653 262 10 35 chr2 198630819 198631021 -54625562 - MLT1J LTR MaLR 0 511 315 513 270 155 0 chr2 198631088 198631236 -54625347 - MLT1J LTR MaLR -339 172 2 2228 103 0 0 chr2 198632178 198632488 -54624095 - AluSq SINE Alu 0 310 1 724 253 56 11 chr2 198632690 198632868 -54623715 + MER45B DNA AcHobo 3 188 -852 3934 185 40 53 chr2 198633432 198634026 -54622557 + MER45B DNA AcHobo 178 759 -822 1739 170 37 0 chr2 198634026 198634320 -54622263 + AluSx SINE Alu 1 305 -7 3934 185 40 53 chr2 198634320 198634597 -54621986 + MER45B DNA AcHobo 759 1038 -2 1837 144 13 10 chr2 198634963 198635262 -54621321 - AluSx SINE Alu -11 301 2 2321 84 3 19 chr2 198635263 198635572 -54621011 - AluSc SINE Alu -5 304 1 2077 99 3 33 chr2 198635573 198635875 -54620708 - AluSc SINE Alu -16 293 1 2181 116 0 13 chr2 198635876 198636178 -54620405 - AluSx SINE Alu -14 298 1 349 233 26 9 chr2 198636370 198636485 -54620098 + L1M4 LINE L1 5188 5302 -844 2225 121 0 0 chr2 198636549 198636855 -54619728 - AluSx SINE Alu -6 306 1 322 276 61 0 chr2 198636855 198636953 -54619630 - L1ME LINE L1 -469 5652 5549 732 131 40 0 chr2 198636964 198637063 -54619520 + FLAM_C SINE Alu 1 103 -40 281 264 91 26 chr2 198637079 198637251 -54619332 - L1ME LINE L1 -577 5544 5360 217 328 29 76 chr2 198637335 198637506 -54619077 + L3 LINE CR1 1327 1489 -88 21 36 0 0 chr2 198637547 198637575 -54619008 + AT_rich Low_complexity Low_complexity 1 28 0 1555 160 78 8 chr2 198637575 198637843 -54618740 - AluJo SINE Alu -25 287 1 2022 133 0 3 chr2 198637864 198638233 -54618350 - AluSx SINE Alu 0 368 1 256 333 0 7 chr2 198638382 198638520 -54618063 + L2 LINE L2 2250 2386 -928 1569 196 5 102 chr2 198638728 198638887 -54617696 + MLT1A1 LTR MaLR 1 174 -191 2240 110 3 0 chr2 198638887 198639179 -54617404 + AluSx SINE Alu 1 293 -19 1569 196 5 102 chr2 198639179 198639423 -54617160 + MLT1A1 LTR MaLR 174 365 0 457 243 70 48 chr2 198639958 198640235 -54616348 + L1MC4a LINE L1 5699 5993 -128 542 288 0 0 chr2 198640393 198640518 -54616065 + L2 LINE L2 3187 3311 -2 2411 87 0 16 chr2 198640701 198641013 -54615570 - AluSg SINE Alu -3 307 1 1682 154 6 65 chr2 198641229 198641554 -54615029 + AluJb SINE Alu 1 306 -6 21 57 0 0 chr2 198642028 198642063 -54614520 + AT_rich Low_complexity Low_complexity 1 35 0 244 226 32 0 chr2 198642523 198642585 -54613998 + L3 LINE CR1 1094 1157 -420 453 296 83 32 chr2 198642586 198642863 -54613720 - L1M4 LINE L1 -1745 4401 4111 988 178 0 0 chr2 198643049 198643206 -54613377 - FRAM SINE Alu -9 157 1 2515 180 78 86 chr2 198643319 198644079 -54612504 - L1ME1 LINE L1 -7 6159 5406 322 205 15 52 chr2 198644081 198644219 -54612364 - MER20 DNA MER1_type -3 216 1 452 198 0 0 chr2 198644219 198644300 -54612283 - L1ME1 LINE L1 -753 5413 5333 * 872 147 35 0 chr2 198644293 198644436 -54612147 - L1ME LINE L1 -350 5816 5669 3421 220 82 40 chr2 198644471 198644782 -54611801 - L1ME1 LINE L1 -836 5310 5014 792 146 8 46 chr2 198644782 198644912 -54611671 - FLAM_A SINE Alu -4 129 5 3421 220 82 40 chr2 198644912 198645249 -54611334 - L1ME1 LINE L1 -1132 5014 4693 1813 166 20 3 chr2 198645249 198645544 -54611039 - AluJo SINE Alu -12 300 1 3421 220 82 40 chr2 198645544 198645656 -54610927 - L1ME1 LINE L1 -1453 4693 4587 2146 115 0 0 chr2 198645656 198645935 -54610648 + AluSg SINE Alu 18 296 -14 3421 220 82 40 chr2 198645935 198647063 -54609520 - L1ME1 LINE L1 -1559 4587 3184 4155 215 102 85 chr2 198647065 198647882 -54608701 + L1MD3 LINE L1 5080 5881 -2114 2433 151 47 24 chr2 198647882 198648305 -54608278 + Tigger2a DNA MER2_type 2 434 0 4155 215 102 85 chr2 198648305 198648427 -54608156 + L1MD3 LINE L1 5881 5999 -1996 468 211 0 67 chr2 198648427 198648531 -54608052 + Tigger2 DNA MER2_type 2612 2708 -10 4155 215 102 85 chr2 198648531 198649431 -54607152 + L1MD3 LINE L1 5999 6882 -1113 2380 131 36 31 chr2 198649431 198649792 -54606791 + L1MB3 LINE L1 5767 6132 -51 2380 68 3 0 chr2 198649792 198650087 -54606496 + AluY SINE Alu 1 296 -15 2380 131 36 31 chr2 198650087 198650138 -54606445 + L1MB3 LINE L1 6132 6181 -2 4155 215 102 85 chr2 198650138 198650654 -54605929 + L1MD3 LINE L1 6882 7387 -608 1403 185 19 131 chr2 198650654 198651065 -54605518 - MLT1A1 LTR MaLR 0 365 1 4155 215 102 85 chr2 198651065 198651622 -54604961 + L1MD3 LINE L1 7387 7990 -5 32 43 0 0 chr2 198651622 198651668 -54604915 + AT_rich Low_complexity Low_complexity 1 46 0 1943 237 79 34 chr2 198651668 198652027 -54604556 + L1ME3A LINE L1 5470 5811 -359 2002 135 72 106 chr2 198652027 198652076 -54604507 - MSTA LTR MaLR 0 428 379 1472 174 6 71 chr2 198652076 198652214 -54604369 + AluJb SINE Alu 12 157 -155 2394 96 0 3 chr2 198652214 198652528 -54604055 + AluSq SINE Alu 1 313 0 1472 174 6 71 chr2 198652528 198652711 -54603872 + AluJb SINE Alu 157 312 0 2002 135 72 106 chr2 198652711 198652947 -54603636 - MSTA LTR MaLR -49 379 161 1933 106 8 0 chr2 198652947 198653202 -54603381 - AluSg SINE Alu -53 257 1 2002 135 72 106 chr2 198653202 198653358 -54603225 - MSTA LTR MaLR -267 161 1 1943 237 79 34 chr2 198653358 198653372 -54603211 + L1ME3A LINE L1 5811 5823 -347 962 141 0 15 chr2 198653372 198653507 -54603076 + AluJo SINE Alu 1 133 -169 1943 237 79 34 chr2 198653507 198653803 -54602780 + L1ME3A LINE L1 5823 6170 0 200 305 71 45 chr2 198654132 198654286 -54602297 + L2 LINE L2 3124 3281 -32 1052 265 105 47 chr2 198655072 198655259 -54601324 + MLT1J LTR MaLR 10 185 -326 2319 103 3 3 chr2 198655259 198655570 -54601013 - AluSq SINE Alu -2 311 1 1052 265 105 47 chr2 198655570 198655750 -54600833 + MLT1J LTR MaLR 185 408 -103 442 45 0 60 chr2 198655750 198655817 -54600766 - L1PA10 LINE L1 -3 6165 6103 1052 265 105 47 chr2 198655817 198655875 -54600708 + MLT1J LTR MaLR 408 461 -50 187 241 229 12 chr2 198655943 198656026 -54600557 - L2 LINE L2 -95 3218 3118 1237 293 118 12 chr2 198656120 198656696 -54599887 + L2 LINE L2 1981 2617 -697 547 143 0 0 chr2 198656707 198656784 -54599799 - AluJ/FRAM SINE Alu -12 300 224 997 150 0 0 chr2 198656884 198657024 -54599559 + AluJo SINE Alu 141 280 -32 180 0 0 0 chr2 198657024 198657044 -54599539 + (GAAAA)n Simple_repeat Simple_repeat 1 20 0 267 330 136 40 chr2 198657046 198657230 -54599353 - L2 LINE L2 -618 2696 2531 2262 193 110 2 chr2 198657230 198657686 -54598897 + MLT1D LTR MaLR 1 505 0 267 330 136 40 chr2 198657686 198657800 -54598783 - L2 LINE L2 -783 2531 2429 2296 112 0 0 chr2 198657800 198658094 -54598489 + AluSx SINE Alu 1 294 -18 267 330 136 40 chr2 198658094 198658439 -54598144 - L2 LINE L2 -885 2429 1990 422 240 103 20 chr2 198658571 198658717 -54597866 + MER69A DNA AcHobo 4 161 -16 386 304 179 13 chr2 198658724 198658948 -54597635 + MIR SINE MIR 2 262 0 305 274 112 74 chr2 198659523 198659738 -54596845 - L1M2 LINE L1 -5837 1012 790 364 253 104 113 chr2 198659763 198659810 -54596773 + L1M2 LINE L1 1045 1091 -5758 189 74 0 0 chr2 198659810 198659837 -54596746 + (CCTCG)n Simple_repeat Simple_repeat 4 30 0 364 253 104 113 chr2 198659837 198659899 -54596684 + L1M2 LINE L1 1091 1152 -5697 26 30 0 0 chr2 198659899 198659932 -54596651 + GC_rich Low_complexity Low_complexity 1 33 0 364 253 104 113 chr2 198659932 198660125 -54596458 + L1M2 LINE L1 1152 1377 -5472 189 0 0 0 chr2 198660183 198660204 -54596379 + (TCCC)n Simple_repeat Simple_repeat 1 21 0 400 338 61 0 chr2 198660937 198661085 -54595498 + MIR3 SINE MIR 51 207 -1 350 335 79 7 chr2 198661724 198661876 -54594707 - MIR SINE MIR -72 190 28 2282 94 0 0 chr2 198662264 198662563 -54594020 + AluSg1 SINE Alu 1 299 -10 206 396 61 24 chr2 198763315 198763479 -54493104 + L3 LINE CR1 1117 1286 -291 34 49 0 37 chr2 198764967 198765048 -54491535 + AT_rich Low_complexity Low_complexity 1 78 0 225 0 0 0 chr2 198766263 198766288 -54490295 + (T)n Simple_repeat Simple_repeat 1 25 0 206 396 61 24 chr2 198766745 198766909 -54489674 - L3 LINE CR1 -291 1286 1117 240 111 0 0 chr2 198767576 198767612 -54488971 + (T)n Simple_repeat Simple_repeat 1 36 0 777 186 8 0 chr2 198768315 198768444 -54488139 - FLAM_A SINE Alu -2 131 2 656 291 50 40 chr2 198768487 198769035 -54487548 - L1M3 LINE L1 -349 5822 5272 216 86 0 0 chr2 198769037 198769072 -54487511 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2011 128 3 0 chr2 198769074 198769364 -54487219 - AluSx SINE Alu -21 291 1 13548 56 83 7 chr2 198770127 198772078 -54484505 - L1P LINE L1 -4044 2102 3 7929 160 80 34 chr2 198774098 198776147 -54480436 - LOR1-int LTR ERV1 -1523 4740 3183 2268 106 0 0 chr2 198776147 198776440 -54480143 - AluSg SINE Alu -17 293 1 7929 160 80 34 chr2 198776440 198776637 -54479946 - LOR1-int LTR ERV1 -3080 3183 2997 998 248 93 11 chr2 198777035 198777305 -54479278 + LTR16C LTR ERVL 200 491 0 4518 228 49 37 chr2 198777813 198778747 -54477836 + HsTC2 DNA Tc2 7 1145 -753 6425 54 15 2 chr2 198778747 198779566 -54477017 + L1PA7 LINE L1 5322 6150 -4 4518 228 49 37 chr2 198779566 198780244 -54476339 + HsTC2 DNA Tc2 1145 1813 -85 965 269 30 20 chr2 198780361 198780763 -54475820 + L1M4 LINE L1 2517 2922 -3224 674 262 215 50 chr2 198780764 198781672 -54474911 + L1M4 LINE L1 4176 5233 -913 354 250 0 52 chr2 198783070 198783186 -54473397 - MER102a DNA MER1_type -1 329 220 1966 114 11 0 chr2 198783507 198783780 -54472803 + AluSp SINE Alu 30 305 -8 1660 186 6 22 chr2 198784272 198784584 -54471999 + AluJo SINE Alu 5 311 -1 208 338 74 49 chr2 198784614 198784898 -54471685 + L2 LINE L2 2384 2674 -640 2206 119 3 0 chr2 198785241 198785543 -54471040 - AluSx SINE Alu -9 303 1 200 313 69 49 chr2 198786044 198786188 -54470395 + MIR3 SINE MIR 6 152 -56 269 209 9 86 chr2 198786478 198786583 -54470000 - L1ME4a LINE L1 -53 6068 5972 230 314 9 9 chr2 198786598 198786703 -54469880 + (TA)n Simple_repeat Simple_repeat 2 106 0 2053 110 4 14 chr2 198786710 198787014 -54469569 - AluSx SINE Alu 0 304 4 848 254 63 0 chr2 198787481 198787765 -54468818 - L1M4 LINE L1 -2630 3516 3215 653 265 198 27 chr2 198788290 198788663 -54467920 + LTR16A1 LTR ERVL 15 451 -6 310 278 305 5 chr2 198789136 198789323 -54467260 + MIR SINE MIR 20 262 0 659 273 67 87 chr2 198789441 198789694 -54466889 - MIR SINE MIR 0 262 15 533 263 86 29 chr2 198789884 198790093 -54466490 + MIR SINE MIR 15 235 -27 676 261 87 33 chr2 198791134 198791502 -54465081 - L1ME4a LINE L1 -4 6117 5730 802 169 46 26 chr2 198791594 198791789 -54464794 + L1MC4a LINE L1 7607 7805 -3 3039 136 125 3 chr2 198792615 198793189 -54463394 - LTR48B LTR ERV1 0 644 1 21 36 0 0 chr2 198793213 198793241 -54463342 + AT_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr2 198793645 198793667 -54462916 + (CAAAA)n Simple_repeat Simple_repeat 1 22 0 25 31 0 0 chr2 198795114 198795146 -54461437 + AT_rich Low_complexity Low_complexity 1 32 0 1567 103 26 15 chr2 198796005 198796276 -54460307 + L1MA8 LINE L1 6008 6281 -10 203 183 33 17 chr2 198797368 198797428 -54459155 + (TTAA)n Simple_repeat Simple_repeat 2 62 0 1781 152 10 10 chr2 198798066 198798362 -54458221 + AluJo SINE Alu 1 296 -16 1929 153 0 3 chr2 198799703 198799997 -54456586 + AluSx SINE Alu 1 293 -19 1118 110 0 0 chr2 198801961 198802130 -54454453 + AluSg/x SINE Alu 138 306 0 2278 106 0 3 chr2 198802524 198802835 -54453748 + AluSg SINE Alu 1 310 0 182 256 0 23 chr2 198802900 198802943 -54453640 + MIR SINE MIR 17 58 -150 2663 123 36 18 chr2 198803038 198803339 -54453244 + L1MA4 LINE L1 5788 6103 -197 2267 93 3 0 chr2 198803339 198803641 -54452942 + AluSx SINE Alu 1 303 -9 2663 123 36 18 chr2 198803641 198803833 -54452750 + L1MA4 LINE L1 6103 6290 -10 21 57 0 0 chr2 198804732 198804767 -54451816 + AT_rich Low_complexity Low_complexity 1 35 0 1068 90 0 0 chr2 198804768 198804902 -54451681 + AluY SINE Alu 1 134 -177 2347 68 0 64 chr2 198804902 198805228 -54451355 + AluY SINE Alu 1 305 -6 416 280 86 68 chr2 198805231 198805510 -54451073 - L1ME4a LINE L1 -80 6041 5758 668 254 109 32 chr2 198806037 198806264 -54450319 - L1ME4a LINE L1 -3 6118 5855 2008 152 7 0 chr2 198806264 198806574 -54450009 - AluJb SINE Alu 0 312 1 668 254 109 32 chr2 198806574 198806684 -54449899 - L1ME4a LINE L1 -266 5855 5755 209 343 0 0 chr2 198806980 198807050 -54449533 + MIR SINE MIR 32 101 -107 730 300 39 13 chr2 198808434 198808667 -54447916 - MIR SINE MIR -22 240 2 464 242 23 16 chr2 198808914 198809042 -54447541 + MIR SINE MIR 66 194 -68 198 71 0 0 chr2 198809366 198809394 -54447189 + (CA)n Simple_repeat Simple_repeat 1 28 0 234 224 61 0 chr2 198809842 198809891 -54446692 + L3 LINE CR1 1523 1574 -3 319 275 14 0 chr2 198810707 198810776 -54445807 + L2 LINE L2 3239 3308 -5 2423 75 0 7 chr2 198810945 198811253 -54445330 + AluY SINE Alu 1 306 -5 2479 68 0 37 chr2 198811602 198811927 -54444656 - AluSq SINE Alu 0 313 1 2258 120 0 0 chr2 198812455 198812754 -54443829 + AluSx SINE Alu 1 299 -13 3325 210 56 61 chr2 198812801 198813643 -54442940 - MER21B LTR ERV1 -5 858 21 304 232 0 29 chr2 198813680 198813749 -54442834 - MER21B LTR ERV1 -796 67 1 794 232 127 24 chr2 198813855 198814265 -54442318 + MER115 DNA AcHobo 177 680 -13 396 271 24 0 chr2 198815063 198815148 -54441435 - MER5A DNA MER1_type -77 112 26 2669 237 86 59 chr2 198815245 198816269 -54440314 - HAL1 LINE L1 -173 2334 1283 243 291 37 80 chr2 198816378 198816996 -54439587 - L1MC4a LINE L1 -234 5936 5500 * 611 233 57 43 chr2 198816982 198817283 -54439300 - HAL1 LINE L1 -1215 1292 988 486 252 79 71 chr2 198817313 198817342 -54439241 - L1MC5 LINE L1 -54 7907 7880 2446 84 3 0 chr2 198817342 198817650 -54438933 + AluSp SINE Alu 1 309 -4 486 252 79 71 chr2 198817650 198818001 -54438582 - L1MC5 LINE L1 -81 7880 7524 192 97 0 0 chr2 198818065 198818096 -54438487 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 459 274 116 96 chr2 198818103 198818593 -54437990 - HAL1 LINE L1 -1590 917 418 260 338 0 0 chr2 198818780 198818854 -54437729 - HAL1 LINE L1 -2431 76 3 36 0 0 0 chr2 198819168 198819204 -54437379 + AT_rich Low_complexity Low_complexity 1 36 0 2042 143 0 6 chr2 198819557 198819871 -54436712 + AluJb SINE Alu 1 312 0 675 250 0 0 chr2 198822968 198823084 -54433499 + FLAM_A SINE Alu 1 116 -17 1574 156 36 25 chr2 198823591 198823867 -54432716 - MER50 LTR ERV1 -23 711 433 1137 147 54 40 chr2 198823861 198824085 -54432498 - MER50 LTR ERV1 -505 229 3 * 481 323 77 14 chr2 198824350 198824570 -54432013 - MIR SINE MIR -1 261 28 241 350 78 19 chr2 198825631 198825734 -54430849 + L2 LINE L2 3150 3258 -14 2464 82 0 3 chr2 198825976 198826280 -54430303 - AluY SINE Alu -8 303 1 284 268 28 0 chr2 198828001 198828072 -54428511 + L2 LINE L2 3240 3312 -1 246 301 140 35 chr2 198830181 198830324 -54426259 - L3b LINE CR1 -121 1462 1305 25 0 0 0 chr2 198831257 198831282 -54425301 + AT_rich Low_complexity Low_complexity 1 25 0 280 297 68 34 chr2 198831330 198831448 -54425135 + MIR3 SINE MIR 87 208 0 311 325 30 46 chr2 198832191 198832388 -54424195 + L3b LINE CR1 1305 1498 -85 2603 150 51 5 chr2 198832647 198833060 -54423523 - MSTB1 LTR MaLR 0 432 1 7373 194 81 28 chr2 198833060 198834506 -54422077 - MSTB1-int LTR MaLR 0 1651 114 2151 109 10 3 chr2 198834506 198834800 -54421783 + AluSc SINE Alu 3 298 -11 7373 194 81 28 chr2 198834800 198834921 -54421662 - MSTB1-int LTR MaLR -1537 114 1 1357 172 4 4 chr2 198834921 198835153 -54421430 - MSTB1 LTR MaLR 0 432 201 500 211 69 9 chr2 198835643 198835772 -54420811 - L1ME1 LINE L1 0 6184 6040 1670 185 123 51 chr2 198835949 198836220 -54420363 + Charlie4a DNA MER1_type 2 252 -1709 1578 178 23 26 chr2 198836220 198836344 -54420239 + AluJb SINE Alu 1 124 -188 207 0 0 0 chr2 198836344 198836367 -54420216 + (TA)n Simple_repeat Simple_repeat 1 23 0 1578 178 23 26 chr2 198836367 198836546 -54420037 + AluJb SINE Alu 124 303 -9 1670 185 123 51 chr2 198836546 198836745 -54419838 + Charlie4a DNA MER1_type 252 506 -2 270 81 0 0 chr2 198837030 198837067 -54419516 + (CA)n Simple_repeat Simple_repeat 2 38 0 221 305 119 34 chr2 198837162 198837280 -54419303 + L2 LINE L2 3180 3307 -6 802 77 0 0 chr2 198837692 198837796 -54418787 + AluY SINE Alu 191 294 -17 471 327 120 48 chr2 198838101 198838157 -54418426 - L2 LINE L2 0 3272 3222 944 195 58 0 chr2 198838157 198838347 -54418236 - MER105 DNA DNA -3 201 1 471 327 120 48 chr2 198838347 198838786 -54417797 - L2 LINE L2 -50 3222 2723 801 160 7 28 chr2 198838878 198839022 -54417561 + MER45A DNA AcHobo 38 178 0 382 214 116 42 chr2 198840223 198840438 -54416145 - L1ME4a LINE L1 -75 6046 5816 331 282 19 10 chr2 198840486 198840589 -54415994 - L1ME4a LINE L1 -384 5737 5634 196 365 12 0 chr2 198840909 198840994 -54415589 - MIR3 SINE MIR -23 185 100 518 224 68 50 chr2 198841424 198841752 -54414831 - MLT1H LTR MaLR -2 547 160 234 220 0 51 chr2 198842216 198842275 -54414308 + MER117 DNA MER1_type 1 56 -141 924 83 0 0 chr2 198842354 198842474 -54414109 + AluSg/x SINE Alu 176 295 -17 1872 149 0 4 chr2 198842487 198842768 -54413815 + AluSx SINE Alu 1 280 -32 294 29 0 0 chr2 198842772 198842807 -54413776 + (CATA)n Simple_repeat Simple_repeat 2 36 0 181 206 32 127 chr2 198842809 198842872 -54413711 - L3 LINE CR1 -778 799 743 245 256 78 93 chr2 198842892 198843021 -54413562 - MLT1I LTR MaLR -185 224 98 202 286 0 0 chr2 198843124 198843173 -54413410 - L3 LINE CR1 -843 734 686 2458 125 22 14 chr2 198844131 198844492 -54412091 + THE1B LTR MaLR 1 364 0 1161 285 170 52 chr2 198844825 198845860 -54410723 - L2 LINE L2 -219 3053 1901 198 200 40 20 chr2 198847288 198847338 -54409245 - L2 LINE L2 -8 3305 3255 2107 97 3 14 chr2 198847985 198848273 -54408310 - AluSx SINE Alu -17 295 11 1387 194 3 28 chr2 198848363 198848523 -54408060 + AluJo SINE Alu 1 152 -160 1595 165 119 6 chr2 198848523 198848850 -54407733 - THE1B LTR MaLR 0 364 1 1387 194 3 28 chr2 198848850 198848977 -54407606 + AluJo SINE Alu 152 281 -31 667 234 112 47 chr2 198849922 198850200 -54406383 - L2 LINE L2 -17 3296 3001 21 0 0 0 chr2 198851200 198851221 -54405362 + AT_rich Low_complexity Low_complexity 1 21 0 464 306 98 33 chr2 198853183 198853490 -54403093 - L2 LINE L2 -655 2659 2333 201 301 96 0 chr2 198853494 198853567 -54403016 - L2 LINE L2 -924 2390 2311 1903 144 38 95 chr2 198854700 198855069 -54401514 - MER7A DNA MER2_type 0 346 1 431 250 32 39 chr2 198855079 198855235 -54401348 + L1MC5 LINE L1 7719 7873 -88 693 293 26 39 chr2 198855617 198855849 -54400734 - MIR SINE MIR -2 260 32 2971 98 54 2 chr2 198856619 198857026 -54399557 - MSTA LTR MaLR 0 428 1 916 316 67 10 chr2 198857299 198857789 -54398794 + L1M4 LINE L1 3667 4184 -1962 454 320 56 42 chr2 198857789 198858270 -54398313 + L1M4 LINE L1 4539 5026 -1120 248 301 86 0 chr2 198858494 198858587 -54397996 + L2 LINE L2 3191 3291 -22 354 127 18 0 chr2 198858833 198858888 -54397695 - MER5A DNA MER1_type -124 65 10 443 236 73 16 chr2 198860192 198860315 -54396268 + MER94 DNA DNA 1 130 -4 1096 169 52 24 chr2 198860916 198861129 -54395454 - MER20 DNA MER1_type 0 219 1 40 59 0 0 chr2 198861571 198861639 -54394944 + AT_rich Low_complexity Low_complexity 1 68 0 1417 76 0 0 chr2 198861719 198861903 -54394680 - AluYa5 SINE Alu 0 311 128 22 0 0 0 chr2 198862331 198862353 -54394230 + AT_rich Low_complexity Low_complexity 1 22 0 524 305 67 58 chr2 198862930 198863346 -54393237 - L2 LINE L2 -2 3270 2851 2532 122 28 6 chr2 198864764 198865118 -54391465 + THE1B LTR MaLR 3 364 0 279 0 0 0 chr2 198865452 198865483 -54391100 + (TA)n Simple_repeat Simple_repeat 2 32 0 2172 102 20 0 chr2 198865483 198865772 -54390811 - AluSx SINE Alu -17 295 1 271 269 90 64 chr2 198866416 198866572 -54390011 + L2 LINE L2 3154 3313 0 2390 89 0 0 chr2 198867321 198867624 -54388959 + AluSx SINE Alu 1 303 -9 1488 154 69 72 chr2 198868529 198868834 -54387749 - AluJo SINE Alu -8 304 1 200 264 124 39 chr2 198870101 198870230 -54386353 - MIR3 SINE MIR -3 205 66 306 311 143 25 chr2 198870382 198870578 -54386005 + L1MC/D LINE L1 5447 5665 -2143 407 156 37 118 chr2 198871675 198871728 -54384855 - MLT1H LTR MaLR 0 549 493 2112 120 3 3 chr2 198871728 198872028 -54384555 + AluSx SINE Alu 1 300 -12 407 156 37 118 chr2 198872028 198872109 -54384474 - MLT1H LTR MaLR -56 493 426 604 281 132 4 chr2 198872147 198872382 -54384201 - MLT1H LTR MaLR -222 327 63 278 214 0 0 chr2 198872985 198873041 -54383542 + L2 LINE L2 3240 3295 -18 258 284 79 53 chr2 198873055 198873245 -54383338 - MIR SINE MIR -10 252 58 21 0 0 0 chr2 198873473 198873494 -54383089 + AT_rich Low_complexity Low_complexity 1 21 0 3070 201 25 32 chr2 198877174 198877820 -54378763 + MER82 DNA MER2_type 13 653 0 275 95 0 0 chr2 198880957 198880999 -54375584 - L2 LINE L2 0 3313 3272 25 31 0 0 chr2 198883004 198883036 -54373547 + AT_rich Low_complexity Low_complexity 1 32 0 262 316 0 13 chr2 198883956 198884032 -54372551 - MIR SINE MIR -63 145 71 21 0 0 0 chr2 198886402 198886423 -54370160 + AT_rich Low_complexity Low_complexity 1 21 0 205 192 231 0 chr2 198886456 198886508 -54370075 + L2 LINE L2 3230 3293 -20 607 277 59 59 chr2 198886994 198887232 -54369351 - MIR SINE MIR -17 245 8 333 0 0 0 chr2 198887624 198887661 -54368922 + (CA)n Simple_repeat Simple_repeat 1 37 0 210 71 0 0 chr2 198887731 198887759 -54368824 + (GAAAA)n Simple_repeat Simple_repeat 3 30 0 484 283 160 0 chr2 198888197 198888384 -54368199 - MIR SINE MIR -16 246 35 2294 108 0 13 chr2 198888465 198888780 -54367803 + AluSx SINE Alu 1 311 -1 190 238 48 32 chr2 198888830 198888893 -54367690 - L2 LINE L2 -5 3308 3245 697 220 50 87 chr2 198888933 198889151 -54367432 - MER20 DNA MER1_type -4 215 6 462 238 25 33 chr2 198892653 198892775 -54363808 - L2 LINE L2 0 3313 3193 252 0 0 0 chr2 198893873 198893901 -54362682 + (TG)n Simple_repeat Simple_repeat 1 28 0 513 115 0 0 chr2 198893901 198893979 -54362604 + (TA)n Simple_repeat Simple_repeat 1 78 0 276 217 58 29 chr2 198894180 198894249 -54362334 + MIR3 SINE MIR 110 180 -28 195 152 0 0 chr2 198894645 198894678 -54361905 - L2 LINE L2 -5 3267 3235 1900 135 21 0 chr2 198898985 198899266 -54357317 + AluSx SINE Alu 1 287 -25 1904 158 0 38 chr2 198899802 198900118 -54356465 + AluJo SINE Alu 1 304 -8 10628 87 17 25 chr2 198900921 198902489 -54354094 + L1PA7 LINE L1 2015 3570 -2576 13583 81 14 1 chr2 198902598 198903194 -54353389 + L1PA7 LINE L1 3572 4159 -1995 2266 103 0 7 chr2 198903194 198903496 -54353087 + AluSx SINE Alu 1 300 -12 13583 81 14 1 chr2 198903496 198905449 -54351134 + L1PA7 LINE L1 4159 6149 -5 414 0 0 0 chr2 198906589 198906635 -54349948 + (CA)n Simple_repeat Simple_repeat 1 46 0 315 149 194 0 chr2 198908184 198908251 -54348332 - MER103 DNA DNA -43 123 44 842 159 0 8 chr2 198908531 198908663 -54347920 - FLAM_C SINE Alu -12 131 1 183 250 18 54 chr2 198908670 198908726 -54347857 + MER5B DNA MER1_type 125 178 0 255 264 93 50 chr2 198909075 198909215 -54347368 + L2 LINE L2 1594 1739 -1575 535 240 55 55 chr2 198909614 198909830 -54346753 + L2 LINE L2 2247 2462 -852 405 322 77 0 chr2 198909830 198909973 -54346610 + MER91A DNA MER1_type 1 154 -42 245 316 0 40 chr2 198909997 198910073 -54346510 + MER91A DNA MER1_type 123 195 -1 * 564 285 212 47 chr2 198910073 198910800 -54345783 + L2 LINE L2 2465 3313 0 1967 137 10 3 chr2 198910880 198911173 -54345410 - AluSx SINE Alu -17 295 1 315 224 21 65 chr2 198913621 198913733 -54342850 - MIR SINE MIR -91 117 10 214 218 36 18 chr2 198913866 198913921 -54342662 + GA-rich Low_complexity Low_complexity 1 56 0 1825 147 7 16 chr2 198914898 198915205 -54341378 - AluJb SINE Alu -8 304 1 289 336 0 17 chr2 198915400 198915516 -54341067 - MIR SINE MIR -138 124 11 21 0 0 0 chr2 198916436 198916457 -54340126 + AT_rich Low_complexity Low_complexity 1 21 0 710 339 66 8 chr2 198917017 198917398 -54339185 + L2 LINE L2 1940 2342 -972 260 276 55 16 chr2 198917410 198917537 -54339046 + MLT1J LTR MaLR 11 142 -369 447 303 178 49 chr2 198917862 198918206 -54338377 + L2 LINE L2 2343 2754 -560 2497 54 0 10 chr2 198918206 198918520 -54338063 + AluY SINE Alu 1 311 0 447 303 178 49 chr2 198918520 198918591 -54337992 + L2 LINE L2 2754 2813 -501 290 297 137 69 chr2 198918591 198918766 -54337817 + MER5A DNA MER1_type 2 188 -1 236 279 52 73 chr2 198918766 198918902 -54337681 + L2 LINE L2 2804 2936 -336 274 257 43 0 chr2 198919439 198919509 -54337074 + L2 LINE L2 3235 3307 -6 25 83 0 0 chr2 198920640 198920700 -54335883 + AT_rich Low_complexity Low_complexity 1 60 0 249 337 43 0 chr2 198921982 198922074 -54334509 + L3 LINE CR1 1480 1575 -2 206 265 59 0 chr2 198924211 198924279 -54332304 + (CATATA)n Simple_repeat Simple_repeat 4 75 0 22 35 0 0 chr2 198924404 198924433 -54332150 + AT_rich Low_complexity Low_complexity 1 29 0 239 0 32 0 chr2 198925262 198925293 -54331290 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 35 0 0 0 chr2 198926167 198926202 -54330381 + AT_rich Low_complexity Low_complexity 1 35 0 28 0 0 0 chr2 198927129 198927157 -54329426 + AT_rich Low_complexity Low_complexity 1 28 0 22 70 0 0 chr2 198927461 198927504 -54329079 + AT_rich Low_complexity Low_complexity 1 43 0 1563 192 31 0 chr2 198930230 198930517 -54326066 + AluJo SINE Alu 1 296 -16 338 45 0 0 chr2 198930551 198930595 -54325988 - AluY SINE Alu -223 77 34 1014 88 15 0 chr2 198930596 198930733 -54325850 + AluY SINE Alu 154 292 -19 2203 98 0 0 chr2 198930818 198931113 -54325470 + AluSx SINE Alu 1 295 -17 31 26 0 0 chr2 198931264 198931302 -54325281 + AT_rich Low_complexity Low_complexity 1 38 0 692 138 0 0 chr2 198931487 198931622 -54324961 + AluSg/x SINE Alu 186 312 0 777 229 126 65 chr2 198931685 198931953 -54324630 + L1MC5 LINE L1 7299 7549 -412 2265 103 3 0 chr2 198931953 198932254 -54324329 + AluSq SINE Alu 1 302 -11 777 229 126 65 chr2 198932254 198932582 -54324001 + L1MC5 LINE L1 7549 7931 -30 186 286 20 0 chr2 198933472 198933521 -54323062 - MIR SINE MIR -105 103 54 217 300 147 35 chr2 198934658 198934843 -54321740 - MIR SINE MIR -46 216 20 29 0 0 0 chr2 198935349 198935378 -54321205 + AT_rich Low_complexity Low_complexity 1 29 0 2196 107 0 0 chr2 198935662 198935953 -54320630 - AluSc SINE Alu -18 291 1 432 316 73 45 chr2 198936755 198936932 -54319651 + MIR3 SINE MIR 16 197 -11 212 356 140 44 chr2 198937208 198937730 -54318853 - L2 LINE L2 -410 2904 2333 211 319 143 43 chr2 198937966 198938176 -54318407 - L2 LINE L2 -27 3245 3015 771 172 136 0 chr2 198938369 198938538 -54318045 + MER58A DNA MER1_type 33 224 0 697 281 38 56 chr2 198938539 198938931 -54317652 + L1MC4 LINE L1 7532 7916 -126 26 50 0 0 chr2 198939888 198939928 -54316655 + AT_rich Low_complexity Low_complexity 1 40 0 7087 141 61 20 chr2 198941404 198942650 -54313933 + Tigger1 DNA MER2_type 1 1297 -1121 773 160 15 8 chr2 198942650 198942781 -54313802 - FLAM_C SINE Alu -11 132 1 7098 118 36 3 chr2 198942786 198943878 -54312705 + Tigger1 DNA MER2_type 1291 2418 0 1121 232 73 12 chr2 198944451 198944791 -54311792 - Charlie2 DNA MER1_type -647 2215 1855 584 273 180 22 chr2 198944798 198945076 -54311507 - Charlie2 DNA MER1_type -2540 322 1 1922 62 94 36 chr2 198945288 198945564 -54311019 + AluY SINE Alu 1 292 -19 1523 191 32 0 chr2 198946507 198946790 -54309793 + AluJo SINE Alu 12 303 -9 290 289 211 26 chr2 198947864 198948020 -54308563 + MIR3 SINE MIR 2 186 -22 21 0 0 0 chr2 198948220 198948241 -54308342 + AT_rich Low_complexity Low_complexity 1 21 0 196 296 37 0 chr2 198949126 198949180 -54307403 + MIR SINE MIR 152 207 -55 46 19 0 0 chr2 198949475 198949528 -54307055 + AT_rich Low_complexity Low_complexity 1 53 0 1743 159 14 7 chr2 198950538 198950828 -54305755 - AluJo SINE Alu -20 292 1 1468 132 86 26 chr2 198951088 198951391 -54305192 + L1MA8 LINE L1 5970 6290 -1 200 184 0 0 chr2 198951509 198951547 -54305036 + (TTTAG)n Simple_repeat Simple_repeat 2 39 0 21 36 0 0 chr2 198951964 198951992 -54304591 + AT_rich Low_complexity Low_complexity 1 28 0 2291 55 6 51 chr2 198953033 198953344 -54303239 + AluSp SINE Alu 2 298 -15 2305 65 17 0 chr2 198953365 198953656 -54302927 + AluY SINE Alu 2 297 -14 34 0 0 0 chr2 198953733 198953767 -54302816 + AT_rich Low_complexity Low_complexity 1 34 0 372 225 150 64 chr2 198955007 198955194 -54301389 - L1MC5 LINE L1 -49 7912 7710 2051 159 12 9 chr2 198955740 198956074 -54300509 + MER2 DNA MER2_type 1 335 -10 249 343 29 20 chr2 198956606 198956708 -54299875 + L2 LINE L2 3186 3288 -25 274 347 210 0 chr2 198957218 198957342 -54299241 + MIR3 SINE MIR 19 168 -40 629 222 8 0 chr2 198957425 198957551 -54299032 + FLAM_C SINE Alu 5 131 -2 28 29 0 0 chr2 198958400 198958435 -54298148 + AT_rich Low_complexity Low_complexity 1 35 0 1893 168 87 12 chr2 198959066 198959470 -54297113 + Tigger2a DNA MER2_type 1 434 0 23 0 0 0 chr2 198960613 198960636 -54295947 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr2 198960927 198960951 -54295632 + AT_rich Low_complexity Low_complexity 1 24 0 2399 56 14 0 chr2 198961660 198961948 -54294635 + AluSp SINE Alu 1 292 -21 225 250 26 53 chr2 198962212 198962288 -54294295 + MIR SINE MIR 80 153 -109 1772 117 16 8 chr2 198963298 198963554 -54293029 + AluSx SINE Alu 36 293 -19 24 77 0 0 chr2 198965282 198965334 -54291249 + AT_rich Low_complexity Low_complexity 1 52 0 879 209 27 36 chr2 198965924 198966144 -54290439 + MIR SINE MIR 45 262 0 934 151 91 6 chr2 198966184 198966435 -54290148 - MER2 DNA MER2_type -28 317 4 2108 114 3 0 chr2 198966703 198966993 -54289590 + AluSx SINE Alu 1 291 -21 461 231 26 8 chr2 198967013 198967130 -54289453 - MIR SINE MIR 0 262 144 364 223 107 29 chr2 198967197 198967300 -54289283 - MIR SINE MIR -106 156 46 240 354 87 44 chr2 198968479 198968685 -54287898 - L2 LINE L2 -112 3160 2946 1030 181 0 0 chr2 198970243 198970403 -54286180 + FRAM SINE Alu 4 163 -13 32 0 0 0 chr2 198970405 198970437 -54286146 + AT_rich Low_complexity Low_complexity 1 32 0 197 306 0 55 chr2 198970452 198970561 -54286022 - MIR3 SINE MIR -110 98 9 371 237 104 40 chr2 198971081 198971254 -54285329 + L3 LINE CR1 1319 1502 -75 243 286 61 20 chr2 198971384 198971482 -54285101 + MIR3 SINE MIR 82 183 -25 478 89 0 13 chr2 198971625 198971704 -54284879 + L1MB3 LINE L1 6099 6176 -7 607 260 52 0 chr2 198971922 198972095 -54284488 + MER58A DNA MER1_type 43 224 0 453 298 125 3 chr2 198972640 198972969 -54283614 - L1ME4a LINE L1 -201 5920 5552 2399 86 0 3 chr2 198973650 198973954 -54282629 - AluSx SINE Alu -9 303 1 2067 136 3 3 chr2 198974417 198974725 -54281858 + AluSg SINE Alu 1 308 -2 2272 89 7 0 chr2 198975098 198975390 -54281193 + AluSx SINE Alu 1 294 -18 25 31 0 0 chr2 198975521 198975553 -54281030 + AT_rich Low_complexity Low_complexity 1 32 0 229 241 63 38 chr2 198975652 198975731 -54280852 - L1MC/D LINE L1 -742 5591 5511 21 0 0 0 chr2 198979188 198979209 -54277374 + GC_rich Low_complexity Low_complexity 1 21 0 21 71 0 0 chr2 198979289 198979331 -54277252 + GC_rich Low_complexity Low_complexity 1 42 0 27 49 0 0 chr2 198979345 198979386 -54277197 + GC_rich Low_complexity Low_complexity 1 41 0 432 0 0 0 chr2 198979668 198979716 -54276867 + (CTG)n Simple_repeat Simple_repeat 3 50 0 26 0 0 0 chr2 198980475 198980501 -54276082 + AT_rich Low_complexity Low_complexity 1 26 0 1186 151 139 0 chr2 198980874 198981125 -54275458 - AluJb SINE Alu -16 286 1 193 286 71 14 chr2 198981238 198981308 -54275275 + MIR SINE MIR 56 129 -133 22 0 0 0 chr2 198981372 198981394 -54275189 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr2 198982007 198982042 -54274541 + AT_rich Low_complexity Low_complexity 1 35 0 2109 110 0 3 chr2 198982462 198982775 -54273808 + AluSc SINE Alu 1 312 0 406 206 34 103 chr2 198983089 198983117 -54273466 + MIR SINE MIR 125 153 -109 2274 84 0 14 chr2 198983117 198983414 -54273169 + AluSx SINE Alu 1 293 -19 406 206 34 103 chr2 198983414 198983531 -54273052 + MIR SINE MIR 153 260 -2 330 292 136 13 chr2 198984628 198984782 -54271801 + MLT1I LTR MaLR 237 409 0 2438 95 0 0 chr2 198985567 198985873 -54270710 - AluSc SINE Alu -3 306 1 233 227 6 6 chr2 198985896 198985976 -54270607 + L1ME LINE L1 5729 5808 -360 2329 104 0 0 chr2 198986079 198986378 -54270205 - AluSg SINE Alu -11 299 1 2159 111 17 0 chr2 198986581 198986878 -54269705 - AluSq SINE Alu -10 303 2 2177 116 0 3 chr2 198986989 198987282 -54269301 + AluSg SINE Alu 1 292 -18 2222 122 73 14 chr2 198987680 198988024 -54268559 + THE1B LTR MaLR 1 364 0 1114 144 6 0 chr2 198988228 198988388 -54268195 + AluSx SINE Alu 1 161 -151 838 86 35 17 chr2 198988506 198988622 -54267961 + AluSg/x SINE Alu 182 299 -13 1586 199 44 18 chr2 198988622 198988963 -54267620 + MSTD LTR MaLR 45 394 -2 6819 223 36 39 chr2 198988969 198989160 -54267423 + MSTA-int LTR MaLR 4 194 -1541 2115 132 134 8 chr2 198989160 198989540 -54267043 + MSTA LTR MaLR 1 428 0 6819 223 36 39 chr2 198989540 198989871 -54266712 + MSTA-int LTR MaLR 194 524 -1211 5100 117 49 38 chr2 198989871 198990040 -54266543 + MER4D LTR ERV1 1 167 -736 2178 121 0 10 chr2 198990040 198990345 -54266238 + AluSc SINE Alu 1 302 -7 5100 117 49 38 chr2 198990345 198991068 -54265515 + MER4D LTR ERV1 167 903 0 6819 223 36 39 chr2 198991068 198992281 -54264302 + MSTA-int LTR MaLR 524 1735 0 1923 164 58 21 chr2 198992281 198992659 -54263924 + MSTD LTR MaLR 1 392 -4 475 250 84 74 chr2 198992696 198992980 -54263603 - MER102a DNA MER1_type -13 317 31 344 336 28 32 chr2 198993115 198993332 -54263251 + MLT1L LTR MaLR 357 572 -43 2274 104 3 3 chr2 198993614 198993922 -54262661 + AluSg SINE Alu 1 308 -2 845 200 48 12 chr2 198993997 198994162 -54262421 + AluJo SINE Alu 118 288 -24 259 98 59 0 chr2 198994163 198994214 -54262369 + (TAGA)n Simple_repeat Simple_repeat 4 57 0 191 204 172 86 chr2 198994489 198994582 -54262001 - MIR SINE MIR -71 191 91 1787 66 151 12 chr2 198995366 198995624 -54260959 - AluSp SINE Alu -9 294 1 378 329 37 12 chr2 198995716 198995880 -54260703 + MIR3 SINE MIR 35 202 -6 417 321 67 6 chr2 198997037 198997202 -54259381 + MIR SINE MIR 82 256 -6 604 341 73 4 chr2 198997202 198997475 -54259108 + L2 LINE L2 2651 2942 -372 252 333 0 32 chr2 198997674 198997767 -54258816 + L2 LINE L2 2936 3025 -247 438 101 253 0 chr2 198997888 198997967 -54258616 - AluSc SINE Alu -12 297 199 2828 89 0 13 chr2 198997986 198998366 -54258217 - THE1C LTR MaLR 0 375 1 2210 103 0 7 chr2 198998562 198998863 -54257720 - AluSg SINE Alu -10 300 2 259 182 36 0 chr2 198999316 198999371 -54257212 - L2 LINE L2 -2 3311 3255 368 288 25 42 chr2 199000506 199000624 -54255959 - L3 LINE CR1 -4 1573 1458 347 361 95 0 chr2 199000688 199000857 -54255726 + MER5A DNA MER1_type 1 185 -4 270 303 67 59 chr2 199001754 199001873 -54254710 + MIR SINE MIR 19 138 -70 1838 138 0 21 chr2 199001962 199002279 -54254304 - AluSx SINE Alu 0 316 6 204 67 0 0 chr2 199002481 199002511 -54254072 + (TG)n Simple_repeat Simple_repeat 1 30 0 253 317 61 0 chr2 199003406 199003488 -54253095 + L2 LINE L2 3209 3295 -18 296 257 114 41 chr2 199003501 199003708 -54252875 + MIR SINE MIR 44 262 0 2431 60 0 17 chr2 199004306 199004608 -54251975 - AluY SINE Alu -14 297 1 29 0 0 0 chr2 199004833 199004862 -54251721 + AT_rich Low_complexity Low_complexity 1 29 0 268 311 198 0 chr2 199005115 199005221 -54251362 + L2 LINE L2 3127 3253 -19 220 150 0 25 chr2 199005188 199005228 -54251355 + MIR SINE MIR 217 255 -7 * 402 246 77 108 chr2 199005687 199005882 -54250701 + MER20B DNA MER1_type 1 189 -594 198 311 0 16 chr2 199006547 199006608 -54249975 + L2 LINE L2 3207 3266 -47 2037 118 7 0 chr2 199007073 199007391 -54249192 + AluY SINE Alu 1 320 0 425 354 26 31 chr2 199007603 199007798 -54248785 - MER91A DNA MER1_type 0 196 3 188 316 92 0 chr2 199008006 199008082 -54248501 + L2 LINE L2 3172 3254 -18 2190 120 0 0 chr2 199008863 199009162 -54247421 - AluSc SINE Alu -10 299 1 557 240 33 66 chr2 199009276 199009518 -54247065 - MER102b DNA MER1_type -12 329 96 1688 60 0 18 chr2 199009531 199009786 -54246797 + AluY SINE Alu 75 325 0 2118 111 0 0 chr2 199010134 199010452 -54246131 - AluSc SINE Alu 0 318 1 281 175 0 35 chr2 199010645 199010702 -54245881 + MIR SINE MIR 121 175 -87 2685 29 3 0 chr2 199011263 199011570 -54245013 + AluY SINE Alu 1 308 -3 405 0 0 0 chr2 199011570 199011615 -54244968 + (TA)n Simple_repeat Simple_repeat 2 46 0 346 329 55 0 chr2 199011870 199012016 -54244567 + MARNA DNA Mariner 91 244 -342 2428 67 0 7 chr2 199012160 199012459 -54244124 + AluSp SINE Alu 1 297 -16 29 28 0 0 chr2 199012466 199012502 -54244081 + AT_rich Low_complexity Low_complexity 1 36 0 204 240 299 7 chr2 199014582 199014736 -54241847 - L2 LINE L2 -1226 2088 1890 268 286 0 0 chr2 199015201 199015257 -54241326 + MER91A DNA MER1_type 140 195 -1 395 302 83 25 chr2 199016076 199016354 -54240229 - HERV16 LTR ERVL -1059 3937 3644 2229 301 62 30 chr2 199016388 199016991 -54239592 - HERV16 LTR ERVL -2113 2883 2237 2160 99 0 0 chr2 199016991 199017308 -54239275 - AluSx SINE Alu 0 318 2 2229 301 62 30 chr2 199017308 199017632 -54238951 - HERV16 LTR ERVL -2759 2237 1925 390 349 30 22 chr2 199017657 199017889 -54238694 - HERV16 LTR ERVL -4753 243 10 1087 300 60 31 chr2 199017906 199018356 -54238227 - LTR16B LTR ERVL -1 463 1 344 226 52 43 chr2 199019324 199019439 -54237144 - L2 LINE L2 -5 3308 3193 683 221 92 69 chr2 199021118 199021268 -54235315 + MLT1H LTR MaLR 1 146 -403 2875 32 6 0 chr2 199021268 199021615 -54234968 - L1PA4 LINE L1 -1 6154 5806 683 221 92 69 chr2 199021615 199021873 -54234710 + MLT1H LTR MaLR 146 464 -85 635 268 104 0 chr2 199022238 199022402 -54234181 - MER58A DNA MER1_type -43 181 1 221 313 0 15 chr2 199022760 199022827 -54233756 + CT-rich Low_complexity Low_complexity 1 66 0 189 175 0 0 chr2 199024024 199024064 -54232519 + (TA)n Simple_repeat Simple_repeat 2 41 0 532 375 51 5 chr2 199024568 199024784 -54231799 - L2 LINE L2 0 3272 3047 572 303 59 50 chr2 199025039 199025379 -54231204 - L3 LINE CR1 -37 1540 1198 464 0 18 0 chr2 199025401 199025457 -54231126 + (TCTA)n Simple_repeat Simple_repeat 3 59 0 266 191 0 0 chr2 199025636 199025683 -54230900 + MER66B LTR ERV1 298 344 -142 748 154 16 28 chr2 199025685 199025867 -54230716 + GA-rich Low_complexity Low_complexity 1 180 0 198 143 0 0 chr2 199025871 199025906 -54230677 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 199 266 31 0 chr2 199026073 199026137 -54230446 - MIR3 SINE MIR -17 191 126 3252 153 62 92 chr2 199026438 199026703 -54229880 + L1MB7 LINE L1 4903 5174 -1010 2575 47 0 0 chr2 199026703 199027000 -54229583 + AluY SINE Alu 2 298 -13 3252 153 62 92 chr2 199027000 199028046 -54228537 + L1MB7 LINE L1 5174 6179 -5 251 304 0 0 chr2 199028072 199028174 -54228409 + L1MC5 LINE L1 7341 7442 -519 23 54 0 0 chr2 199028287 199028324 -54228259 + AT_rich Low_complexity Low_complexity 1 37 0 2444 62 3 3 chr2 199028576 199028904 -54227679 - AluSc SINE Alu 0 328 1 28 79 0 0 chr2 199029563 199029626 -54226957 + AT_rich Low_complexity Low_complexity 1 63 0 1453 201 70 100 chr2 199029728 199030329 -54226254 + L1MA9 LINE L1 5692 6274 -38 1892 95 53 0 chr2 199030341 199030603 -54225980 + AluSq SINE Alu 20 295 -18 2241 133 83 12 chr2 199030625 199031024 -54225559 + MSTA LTR MaLR 1 427 -1 342 226 91 106 chr2 199031692 199032032 -54224551 - L1ME LINE L1 -321 5800 5466 26 64 0 0 chr2 199032043 199032090 -54224493 + AT_rich Low_complexity Low_complexity 1 47 0 188 86 29 0 chr2 199032129 199032164 -54224419 + (TA)n Simple_repeat Simple_repeat 1 36 0 434 186 35 12 chr2 199032689 199032775 -54223808 - MER5B DNA MER1_type -1 177 90 1050 209 112 53 chr2 199032784 199033105 -54223478 + MER2 DNA MER2_type 6 345 0 327 151 164 0 chr2 199033105 199033178 -54223405 - MER5B DNA MER1_type -91 87 3 1340 228 34 18 chr2 199033322 199033708 -54222875 + L1M4 LINE L1 1339 1730 -4654 1396 263 82 24 chr2 199033788 199034251 -54222332 + L1M4 LINE L1 3954 4454 -1928 2452 78 0 0 chr2 199034251 199034546 -54222037 - AluY SINE Alu -16 295 1 1396 263 82 24 chr2 199034546 199034622 -54221961 + L1M4 LINE L1 4454 4524 -1858 2170 261 47 49 chr2 199034648 199035386 -54221197 - MER21B LTR ERV1 -126 737 1 3242 177 32 15 chr2 199035388 199035850 -54220733 + L1M4 LINE L1 4478 4958 -1424 2140 106 13 17 chr2 199035850 199036151 -54220432 + AluSq SINE Alu 4 303 -10 3242 177 32 15 chr2 199036151 199036412 -54220171 + L1M4 LINE L1 4958 5213 -1169 2366 74 7 10 chr2 199036585 199036881 -54219702 - AluSg SINE Alu -14 296 2 262 305 84 21 chr2 199037040 199037135 -54219448 - MER5A DNA MER1_type -26 163 63 2399 106 0 3 chr2 199037176 199037487 -54219096 + AluSg SINE Alu 1 310 0 228 294 25 10 chr2 199038171 199038340 -54218243 - MIR SINE MIR -24 238 8 2154 81 3 11 chr2 199040753 199041038 -54215545 - AluSg SINE Alu -10 300 18 1284 230 122 5 chr2 199041162 199041554 -54215029 - MLT1C LTR MaLR 0 467 30 297 0 0 0 chr2 199041600 199041633 -54214950 + (TG)n Simple_repeat Simple_repeat 2 34 0 302 193 42 42 chr2 199041988 199042107 -54214476 - L1MC4 LINE L1 0 8042 7924 2988 192 5 14 chr2 199042138 199042700 -54213883 + MER74A LTR ERVL 2 558 0 1991 218 114 7 chr2 199042753 199043573 -54213010 - L1ME1 LINE L1 -5 6161 5213 1040 176 199 4 chr2 199044257 199044518 -54212065 + AluSx SINE Alu 1 312 0 309 51 0 0 chr2 199045907 199045946 -54210637 + (TG)n Simple_repeat Simple_repeat 2 40 0 614 309 208 0 chr2 199046395 199046741 -54209842 + L3 LINE CR1 1053 1470 -107 590 285 55 23 chr2 199047061 199047317 -54209266 - LTR33 LTR ERVL -2 519 256 602 199 45 19 chr2 199047344 199047500 -54209083 - LTR33 LTR ERVL -350 171 12 246 226 48 0 chr2 199047825 199047887 -54208696 + MER69 DNA AcHobo 2 66 -2460 631 209 0 0 chr2 199048025 199048164 -54208419 + MER69 DNA AcHobo 2380 2518 -8 480 341 35 23 chr2 199049255 199049426 -54207157 - MIR SINE MIR -81 181 9 357 284 21 0 chr2 199049426 199049521 -54207062 + MER5A DNA MER1_type 1 97 -92 260 260 213 0 chr2 199049537 199049664 -54206919 - L2 LINE L2 -333 2980 2827 482 22 0 87 chr2 199049687 199049779 -54206804 + (TTTCC)n Simple_repeat Simple_repeat 1 84 0 1546 169 44 0 chr2 199049779 199050052 -54206531 - AluJo SINE Alu -1 311 27 230 310 103 0 chr2 199050058 199050145 -54206438 - L2 LINE L2 -540 2774 2679 255 229 33 53 chr2 199050244 199050396 -54206187 + MLT1J2 LTR MaLR 76 259 -252 719 271 86 40 chr2 199050565 199050868 -54205715 - L2 LINE L2 -600 2714 2398 32 67 0 0 chr2 199051543 199051603 -54204980 + AT_rich Low_complexity Low_complexity 1 60 0 2200 98 11 0 chr2 199053392 199053678 -54202905 + AluSc SINE Alu 1 289 -20 254 254 0 16 chr2 199054384 199054447 -54202136 - L2 LINE L2 -4 3268 3207 187 246 46 15 chr2 199054782 199054847 -54201736 + MER5A DNA MER1_type 37 103 -86 649 174 24 12 chr2 199055197 199055364 -54201219 + CT-rich Low_complexity Low_complexity 4 172 0 834 175 48 30 chr2 199055392 199055558 -54201025 - FRAM SINE Alu -8 168 1 344 113 32 0 chr2 199055798 199055860 -54200723 + (TATG)n Simple_repeat Simple_repeat 3 66 0 336 302 128 45 chr2 199055906 199056085 -54200498 - MIR SINE MIR -66 196 3 927 206 27 0 chr2 199056596 199056780 -54199803 + MER5A DNA MER1_type 1 189 0 413 277 100 8 chr2 199056780 199056910 -54199673 + MER5A DNA MER1_type 46 187 -2 1487 165 19 27 chr2 199057550 199057906 -54198677 + L1MB5 LINE L1 5832 6174 -6 227 265 147 18 chr2 199057949 199058119 -54198464 + MARNA DNA Mariner 328 519 -67 327 65 0 0 chr2 199058164 199058210 -54198373 + (CA)n Simple_repeat Simple_repeat 1 46 0 253 348 71 33 chr2 199059920 199060104 -54196479 + L3b LINE CR1 1128 1318 -265 46 19 0 0 chr2 199060524 199060577 -54196006 + AT_rich Low_complexity Low_complexity 1 53 0 258 317 100 25 chr2 199060580 199060700 -54195883 - MER5B DNA MER1_type 0 178 50 294 266 110 44 chr2 199061041 199061222 -54195361 - MIR SINE MIR -65 143 8 1520 166 51 20 chr2 199061552 199061847 -54194736 + AluJo SINE Alu 1 304 -8 189 74 0 0 chr2 199062200 199062227 -54194356 + (GGATG)n Simple_repeat Simple_repeat 1 27 0 185 0 40 0 chr2 199062804 199062829 -54193754 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 186 43 0 0 chr2 199062984 199063007 -54193576 + (CA)n Simple_repeat Simple_repeat 2 24 0 2039 91 8 0 chr2 199063021 199063284 -54193299 - AluSc SINE Alu -6 303 39 754 271 32 36 chr2 199063299 199063550 -54193033 + MIR SINE MIR 10 259 -3 2001 38 13 0 chr2 199063666 199063903 -54192680 - AluY SINE Alu -8 303 64 191 330 128 11 chr2 199063961 199064055 -54192528 + L2 LINE L2 3108 3212 -60 200 194 0 0 chr2 199064505 199064541 -54192042 + (CA)n Simple_repeat Simple_repeat 1 36 0 261 0 0 0 chr2 199064746 199064775 -54191808 + (T)n Simple_repeat Simple_repeat 1 29 0 281 303 8 49 chr2 199064854 199064976 -54191607 - L2 LINE L2 0 3313 3197 27 49 0 0 chr2 199065155 199065196 -54191387 + AT_rich Low_complexity Low_complexity 1 41 0 1624 212 87 72 chr2 199065588 199066192 -54190391 - MLT1G LTR MaLR -5 585 10 1880 194 68 3 chr2 199066465 199066831 -54189752 + MLT1B LTR MaLR 1 390 0 296 383 106 29 chr2 199066916 199067227 -54189356 + L2 LINE L2 2924 3258 -14 312 281 10 21 chr2 199067247 199067343 -54189240 - MIR3 SINE MIR -6 202 108 181 214 36 131 chr2 199067566 199067625 -54188958 + MIR3 SINE MIR 112 162 -46 2264 113 3 3 chr2 199067625 199067936 -54188647 - AluSx SINE Alu -1 311 1 181 214 36 131 chr2 199067936 199067960 -54188623 + MIR3 SINE MIR 162 187 -21 220 331 105 16 chr2 199070541 199070665 -54185918 + L3 LINE CR1 1323 1457 -120 1180 275 63 38 chr2 199070676 199071149 -54185434 - LTR16C LTR ERVL -6 485 1 2062 142 7 7 chr2 199071348 199071657 -54184926 - AluJb SINE Alu -3 309 1 294 247 43 56 chr2 199071775 199071937 -54184646 + LTR31 LTR ERV1 446 605 -14 1417 203 29 0 chr2 199072696 199072972 -54183611 + L1ME1 LINE L1 5861 6144 -22 237 178 0 0 chr2 199072972 199073017 -54183566 + (TATG)n Simple_repeat Simple_repeat 2 46 0 356 253 23 0 chr2 199073017 199073104 -54183479 + L1MC4 LINE L1 6614 6702 -1340 2304 99 0 10 chr2 199073123 199073427 -54183156 - AluSx SINE Alu -11 301 1 203 162 0 0 chr2 199073436 199073473 -54183110 + A-rich Low_complexity Low_complexity 4 40 0 200 167 0 19 chr2 199074182 199074236 -54182347 + G-rich Low_complexity Low_complexity 1 53 0 1692 186 286 42 chr2 199075073 199075271 -54181312 - MLT1E1 LTR MaLR 0 654 506 2546 64 0 6 chr2 199075271 199075583 -54181000 - AluY SINE Alu -1 310 1 1692 186 286 42 chr2 199075583 199075904 -54180679 - MLT1E1 LTR MaLR -148 506 8 230 274 0 0 chr2 199075924 199075975 -54180608 - MLT1L LTR MaLR -349 266 216 * 303 179 0 115 chr2 199075948 199076026 -54180557 - MLT1J LTR MaLR -333 178 110 220 354 0 0 chr2 199076146 199076225 -54180358 - MIR3 SINE MIR -9 199 121 217 385 0 0 chr2 199076744 199076827 -54179756 - L2 LINE L2 -671 2643 2561 253 228 63 25 chr2 199076905 199076984 -54179599 + L2 LINE L2 3187 3268 -4 241 267 69 35 chr2 199077029 199077145 -54179438 - L2 LINE L2 -905 2409 2290 2511 77 0 0 chr2 199077475 199077785 -54178798 + AluY SINE Alu 1 310 -1 215 225 0 0 chr2 199078013 199078053 -54178530 + GA-rich Low_complexity Low_complexity 1 40 0 222 258 161 21 chr2 199078071 199078164 -54178419 + MIR3 SINE MIR 67 172 -36 200 121 30 0 chr2 199078365 199078398 -54178185 + (TG)n Simple_repeat Simple_repeat 2 35 0 194 0 0 37 chr2 199078838 199078865 -54177718 + (TTA)n Simple_repeat Simple_repeat 2 27 0 341 309 69 73 chr2 199079759 199079963 -54176620 - MLT1J LTR MaLR -212 299 97 435 19 0 0 chr2 199080556 199080608 -54175975 + (CA)n Simple_repeat Simple_repeat 2 53 0 322 305 67 0 chr2 199080873 199080978 -54175605 + MIR SINE MIR 40 151 -57 227 324 0 0 chr2 199081023 199081091 -54175492 - L2 LINE L2 0 3272 3205 1323 140 25 25 chr2 199081164 199081407 -54175176 + L1MA8 LINE L1 6047 6289 -2 2685 251 110 7 chr2 199081418 199082192 -54174391 + L1MB4 LINE L1 4393 5246 -900 44052 49 2 1 chr2 199082194 199088345 -54168238 + L1PA4 LINE L1 2 6155 0 4521 171 32 35 chr2 199088359 199089236 -54167347 + L1MB4 LINE L1 5239 6113 -67 917 148 8 0 chr2 199089236 199089364 -54167219 + AluJ SINE Alu 2 130 -172 4521 171 32 35 chr2 199089364 199089430 -54167153 + L1MB4 LINE L1 6113 6178 -2 581 204 20 0 chr2 199091010 199091152 -54165431 + FLAM_A SINE Alu 18 161 0 985 183 6 11 chr2 199091464 199091644 -54164939 + AluJ SINE Alu 112 290 -22 2392 80 10 0 chr2 199091704 199092006 -54164577 + AluY SINE Alu 1 305 -6 407 35 18 0 chr2 199092988 199093045 -54163538 + (CA)n Simple_repeat Simple_repeat 1 58 0 279 0 0 0 chr2 199093060 199093091 -54163492 + (TG)n Simple_repeat Simple_repeat 2 32 0 284 294 110 7 chr2 199093239 199093385 -54163198 - L1ME LINE L1 -337 5784 5624 1008 205 156 52 chr2 199093676 199093991 -54162592 + MLT1J2 LTR MaLR 24 380 -70 1589 153 104 0 chr2 199093991 199094259 -54162324 - AluJb SINE Alu -16 296 1 1008 205 156 52 chr2 199094259 199094289 -54162294 + MLT1J2 LTR MaLR 380 405 -45 535 213 143 9 chr2 199094480 199094642 -54161941 + MLT1I LTR MaLR 268 409 0 820 211 29 29 chr2 199096948 199097123 -54159460 + AluJo SINE Alu 118 292 -20 25 0 0 0 chr2 199097615 199097640 -54158943 + AT_rich Low_complexity Low_complexity 1 25 0 899 190 0 6 chr2 199098547 199098710 -54157873 + FRAM SINE Alu 2 163 -13 2348 84 30 0 chr2 199098712 199099011 -54157572 + AluSx SINE Alu 1 308 -4 4312 135 83 51 chr2 199099066 199100502 -54156081 + pTR5 LTR ERV1 742 2606 0 243 61 0 0 chr2 199100991 199101024 -54155559 + (TAAAAA)n Simple_repeat Simple_repeat 4 36 0 2264 91 0 82 chr2 199101064 199101404 -54155179 - AluSx SINE Alu 0 312 1 2015 168 122 3 chr2 199101701 199102087 -54154496 - MSTB1 LTR MaLR 0 432 1 586 254 87 103 chr2 199102347 199102772 -54153811 - Charlie8 DNA MER1_type -1887 530 113 225 0 0 0 chr2 199102882 199102907 -54153676 + (TG)n Simple_repeat Simple_repeat 1 25 0 548 202 31 127 chr2 199103253 199103481 -54153102 - L2 LINE L2 0 3313 3108 1831 262 102 15 chr2 199103485 199104080 -54152503 + HERV16 LTR ERVL 2096 2742 -2254 2397 194 113 4 chr2 199104080 199104550 -54152033 + MLT1F1 LTR MaLR 1 521 -46 529 214 64 0 chr2 199105724 199105864 -54150719 + L1MDb LINE L1 1226 1374 -5035 415 183 0 0 chr2 199105945 199106016 -54150567 - L1MA9 LINE L1 -39 6273 6203 1641 165 52 30 chr2 199106051 199106420 -54150163 + L1MDb LINE L1 1409 1785 -4621 476 184 9 9 chr2 199106444 199106553 -54150030 - L1MDb LINE L1 -5247 1296 1188 527 168 50 0 chr2 199106555 199106656 -54149927 + L1MA9 LINE L1 6168 6273 -39 854 225 62 59 chr2 199106730 199107019 -54149564 - L1MDb LINE L1 -5340 1203 914 2437 214 45 12 chr2 199107027 199107514 -54149069 + MLT1D LTR MaLR 1 503 -2 1120 237 89 53 chr2 199107626 199108040 -54148543 - MLT1E3 LTR MaLR -193 431 3 575 223 21 75 chr2 199108048 199108236 -54148347 - L1MDb LINE L1 -6184 356 179 244 70 47 0 chr2 199108251 199108294 -54148289 + (TA)n Simple_repeat Simple_repeat 1 45 0 343 200 11 11 chr2 199108345 199108440 -54148143 + (TA)n Simple_repeat Simple_repeat 2 96 0 2379 80 0 7 chr2 199108468 199108767 -54147816 - AluY SINE Alu -14 297 1 12708 69 5 8 chr2 199108769 199109364 -54147219 - L1PA8 LINE L1 -272 5900 5305 2368 89 7 0 chr2 199109364 199109666 -54146917 - AluSc SINE Alu -5 304 1 12708 69 5 8 chr2 199109666 199111287 -54145296 - L1PA8 LINE L1 -867 5305 3681 492 223 21 0 chr2 199111360 199111454 -54145129 + MER21B LTR ERV1 20 115 -748 2235 189 119 30 chr2 199111480 199112051 -54144532 + MER21B LTR ERV1 185 806 -57 285 226 105 68 chr2 199112087 199112220 -54144363 - L1MDb LINE L1 -6396 144 7 285 301 0 27 chr2 199112261 199112334 -54144249 + MIR3 SINE MIR 11 81 -127 288 177 39 71 chr2 199112411 199112629 -54143954 + Charlie7 DNA MER1_type 2415 2572 -40 706 271 94 32 chr2 199113330 199113702 -54142881 + MLT1J LTR MaLR 117 511 0 1299 173 5 14 chr2 199113914 199114134 -54142449 - MLT1A1 LTR MaLR 0 365 148 1576 144 96 4 chr2 199114134 199114405 -54142178 - AluSg SINE Alu -4 306 11 1286 131 33 0 chr2 199114414 199114597 -54141986 - AluSx SINE Alu -123 189 1 931 116 20 7 chr2 199114605 199114752 -54141831 - MLT1A1 LTR MaLR -216 149 1 490 267 72 31 chr2 199115301 199115496 -54141087 + MLT1K LTR MaLR 375 577 -11 333 400 12 6 chr2 199116895 199117065 -54139518 + MIR3 SINE MIR 22 192 -16 345 238 105 9 chr2 199117296 199117401 -54139182 + L2 LINE L2 3199 3313 0 206 293 35 60 chr2 199117438 199117554 -54139029 - L2 LINE L2 -212 3060 2948 789 257 124 16 chr2 199117560 199117809 -54138774 + MLT1J LTR MaLR 1 276 -235 1495 231 107 26 chr2 199117811 199118164 -54138419 + MLT2F LTR ERVL 1 324 -339 1621 215 79 14 chr2 199118164 199118532 -54138051 - MSTD LTR MaLR -4 392 1 1495 231 107 26 chr2 199118532 199118701 -54137882 + MLT2F LTR ERVL 324 478 -185 414 0 0 0 chr2 199118701 199118747 -54137836 + (TG)n Simple_repeat Simple_repeat 2 47 0 1495 231 107 26 chr2 199118747 199118776 -54137807 + MLT2F LTR ERVL 478 654 -9 1270 243 55 7 chr2 199118780 199119232 -54137351 + MLT1K-int LTR MaLR 15 611 -760 465 299 98 6 chr2 199119474 199119638 -54136945 + MLT1K-int LTR MaLR 699 877 -494 998 226 39 14 chr2 199119753 199119961 -54136622 + MLT1E LTR MaLR 381 593 0 828 238 79 14 chr2 199119963 199120177 -54136406 + MLT1J LTR MaLR 282 509 -2 864 140 24 1 chr2 199120323 199120472 -54136111 - L1P1 LINE L1 -335 5820 5668 641 110 0 0 chr2 199120474 199120565 -54136018 - AluSg/x SINE Alu -2 307 217 1856 193 6 0 chr2 199120565 199120887 -54135696 - L1ME LINE L1 -499 6061 5738 5844 223 42 43 chr2 199120908 199122533 -54134050 - L1ME LINE L1 -1663 4877 3254 2435 89 0 0 chr2 199122533 199122835 -54133748 + AluY SINE Alu 1 302 -9 5844 223 42 43 chr2 199122835 199123089 -54133494 - L1ME LINE L1 -3286 3254 3001 478 262 221 6 chr2 199123096 199123268 -54133315 + MER58C DNA MER1_type 4 212 -3 1352 216 34 57 chr2 199123280 199123400 -54133183 - L1MDa LINE L1 -3549 2991 2870 2327 132 3 28 chr2 199123400 199123678 -54132905 - MER7A DNA MER2_type -2692 346 79 2403 78 3 0 chr2 199123678 199123974 -54132609 + AluSp SINE Alu 1 297 -16 2327 132 3 28 chr2 199123974 199124052 -54132531 - MER7A DNA MER2_type -2959 79 1 1352 216 34 57 chr2 199124052 199124368 -54132215 - L1MDa LINE L1 -3670 2870 2558 23 33 0 0 chr2 199124753 199124783 -54131800 + AT_rich Low_complexity Low_complexity 1 30 0 397 294 56 16 chr2 199124912 199125038 -54131545 + MIR3 SINE MIR 14 144 -64 2109 146 5 85 chr2 199125169 199125547 -54131036 + MER7A DNA MER2_type 1 346 0 189 0 0 0 chr2 199126120 199126141 -54130442 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 378 113 36 47 chr2 199126232 199126330 -54130253 + LTR49 LTR ERV1 459 573 -71 491 292 67 52 chr2 199127315 199127582 -54129001 - MLT1J LTR MaLR 0 511 241 380 240 33 8 chr2 199127605 199127726 -54128857 + L1ME4a LINE L1 5984 6107 -14 1918 131 0 33 chr2 199127749 199128054 -54128529 - AluSx SINE Alu -17 295 1 1473 248 81 33 chr2 199128438 199128922 -54127661 - MLT1F1 LTR MaLR 0 567 61 1340 189 4 9 chr2 199129163 199129390 -54127193 - AluJo SINE Alu -86 226 1 1264 109 109 14 chr2 199129502 199129713 -54126870 - MSTA LTR MaLR -47 381 151 1532 174 49 113 chr2 199130605 199130995 -54125588 + MLT1A1 LTR MaLR 1 365 0 497 171 27 9 chr2 199131524 199131635 -54124948 + LTR33A LTR ERVL 394 506 -17 2435 129 113 10 chr2 199131758 199132146 -54124437 - MSTA LTR MaLR 0 428 1 314 245 82 10 chr2 199134317 199134415 -54122168 + Charlie7 DNA MER1_type 1 105 -2507 * 582 251 42 5 chr2 199134383 199134574 -54122009 + Charlie7 DNA MER1_type 2415 2612 0 2459 193 89 2 chr2 199135533 199136014 -54120569 - MER68 LTR ERV1 -30 532 10 22 35 0 0 chr2 199136247 199136276 -54120307 + AT_rich Low_complexity Low_complexity 1 29 0 1501 171 53 7 chr2 199136278 199136559 -54120024 - AluJo SINE Alu -18 294 1 226 355 36 9 chr2 199136565 199136675 -54119908 - MIR SINE MIR -122 140 28 3718 150 53 63 chr2 199138261 199139045 -54117538 - MER21A LTR ERV1 -17 914 187 1067 70 0 0 chr2 199139093 199139221 -54117362 + AluSg SINE Alu 1 128 -182 480 161 119 34 chr2 199139230 199139348 -54117235 - MER21A LTR ERV1 -796 135 8 207 0 0 0 chr2 199139349 199139372 -54117211 + (CA)n Simple_repeat Simple_repeat 2 24 0 1961 126 18 7 chr2 199140395 199140681 -54115902 + AluSx SINE Alu 12 300 -12 279 304 275 0 chr2 199140842 199140980 -54115603 + MIR SINE MIR 65 240 -22 208 233 33 50 chr2 199140949 199141009 -54115574 + L2 LINE L2 3214 3272 0 * 1785 132 3 75 chr2 199141958 199142328 -54114255 - MER4A LTR ERV1 0 664 263 489 156 89 0 chr2 199142330 199142420 -54114163 - MER4A LTR ERV1 -566 98 1 2807 13 0 0 chr2 199143324 199143630 -54112953 + AluYa5 SINE Alu 1 306 -5 295 335 118 6 chr2 199143663 199143824 -54112759 - MIR SINE MIR -36 226 48 341 261 43 26 chr2 199143869 199143984 -54112599 - L3 LINE CR1 -192 1385 1269 310 200 140 20 chr2 199144059 199144159 -54112424 - L3 LINE CR1 -310 1267 1156 390 217 52 35 chr2 199144544 199144659 -54111924 - MER5B DNA MER1_type -45 133 17 1776 126 41 11 chr2 199145042 199145313 -54111270 + AluSx SINE Alu 1 279 -33 395 301 27 7 chr2 199145373 199145519 -54111064 - MER117 DNA MER1_type -32 165 17 181 333 113 13 chr2 199147666 199147816 -54108767 + L2 LINE L2 2889 3053 -219 1803 159 0 34 chr2 199148192 199148513 -54108070 + AluJo SINE Alu 3 312 0 2202 96 0 0 chr2 199149700 199150008 -54106575 + AluSx SINE Alu 1 308 0 297 0 0 0 chr2 199150389 199150422 -54106161 + (TG)n Simple_repeat Simple_repeat 1 33 0 1458 207 48 7 chr2 199151129 199151399 -54105184 - AluJo SINE Alu -31 281 1 2451 112 25 30 chr2 199151679 199152045 -54104538 + THE1B LTR MaLR 1 364 0 2339 140 22 66 chr2 199152607 199153015 -54103568 - MLT1B LTR MaLR 0 390 1 2241 164 82 23 chr2 199153768 199154246 -54102337 - MER34 LTR ERV1 0 787 27 209 270 99 45 chr2 199154283 199154394 -54102189 - MIR3 SINE MIR -7 201 85 2104 130 0 10 chr2 199154502 199154803 -54101780 + AluJb SINE Alu 1 298 -14 229 231 77 55 chr2 199154880 199154971 -54101612 + MLT1K LTR MaLR 182 274 -314 2097 113 31 0 chr2 199155730 199156021 -54100562 + AluSx SINE Alu 1 300 -12 1752 173 0 7 chr2 199156335 199156642 -54099941 + AluJb SINE Alu 1 305 -7 22 0 0 0 chr2 199156765 199156787 -54099796 + AT_rich Low_complexity Low_complexity 1 22 0 2019 120 32 3 chr2 199158043 199158326 -54098257 + AluSx SINE Alu 1 291 -21 193 268 134 31 chr2 199158807 199158904 -54097679 - MIR3 SINE MIR -52 156 50 350 281 24 38 chr2 199159220 199159373 -54097210 - MIR3 SINE MIR -39 169 30 267 247 137 34 chr2 199159604 199159750 -54096833 + MIR3 SINE MIR 6 166 -42 498 343 63 40 chr2 199161058 199161487 -54095096 + L2 LINE L2 1938 2376 -938 1330 171 143 20 chr2 199161824 199162110 -54094473 + AluJo SINE Alu 1 317 0 202 308 77 0 chr2 199162383 199162474 -54094109 + MIR SINE MIR 98 195 -67 258 188 88 25 chr2 199162560 199162640 -54093943 - L1MC4 LINE L1 -696 7346 7262 274 203 0 72 chr2 199162688 199162757 -54093826 + L2 LINE L2 3209 3272 0 977 200 0 0 chr2 199162929 199163104 -54093479 + AluJb SINE Alu 129 303 -9 280 246 246 0 chr2 199163587 199163709 -54092874 + MIR SINE MIR 75 226 -36 27 0 0 0 chr2 199163912 199163939 -54092644 + AT_rich Low_complexity Low_complexity 1 27 0 293 210 123 0 chr2 199165256 199165337 -54091246 + L1MA9 LINE L1 6201 6291 -21 1939 72 0 34 chr2 199165948 199166213 -54090370 - AluY SINE Alu -19 292 37 228 35 0 0 chr2 199167023 199167052 -54089531 + (CAA)n Simple_repeat Simple_repeat 2 30 0 240 188 43 101 chr2 199167304 199167373 -54089210 + L2 LINE L2 3170 3234 -38 21 0 0 0 chr2 199168074 199168095 -54088488 + AT_rich Low_complexity Low_complexity 1 21 0 376 245 139 25 chr2 199170495 199170713 -54085870 + MIR SINE MIR 10 218 -44 22 0 0 0 chr2 199170716 199170738 -54085845 + AT_rich Low_complexity Low_complexity 1 22 0 200 200 0 22 chr2 199171049 199171094 -54085489 + (CA)n Simple_repeat Simple_repeat 2 45 0 511 328 73 10 chr2 199171211 199171415 -54085168 - MIR SINE MIR 0 262 46 2093 101 44 0 chr2 199171470 199171847 -54084736 + AluY SINE Alu 1 390 0 234 333 102 9 chr2 199172364 199172472 -54084111 + MIR3 SINE MIR 67 184 -24 980 191 109 5 chr2 199172944 199173154 -54083429 - MER46A DNA MER2_type -4 232 1 216 0 0 0 chr2 199173176 199173200 -54083383 + (T)n Simple_repeat Simple_repeat 1 24 0 550 228 114 27 chr2 199174230 199174414 -54082169 + L2 LINE L2 3114 3313 0 1862 103 0 128 chr2 199177150 199177501 -54079082 + AluSx SINE Alu 1 306 -6 279 312 105 18 chr2 199177536 199177821 -54078762 - L1ME LINE L1 -351 5770 5461 611 247 84 32 chr2 199178185 199178375 -54078208 + MIR SINE MIR 50 249 -13 865 264 44 13 chr2 199179523 199179750 -54076833 + MIR SINE MIR 26 259 -3 525 341 90 33 chr2 199180166 199180500 -54076083 - L2 LINE L2 -344 2970 2618 191 335 94 39 chr2 199180544 199180747 -54075836 - L2 LINE L2 -877 2437 2224 269 296 26 59 chr2 199180867 199181019 -54075564 + MIR SINE MIR 76 222 -40 336 312 80 20 chr2 199182776 199182975 -54073608 + MIR SINE MIR 30 240 -22 1350 159 183 0 chr2 199183897 199184149 -54072434 - AluJo SINE Alu -4 298 1 217 313 28 85 chr2 199184274 199184485 -54072098 + L2 LINE L2 2866 3064 -208 820 151 0 0 chr2 199185708 199185827 -54070756 - FLAM_C SINE Alu -24 119 1 854 283 155 24 chr2 199185947 199186499 -54070084 - L2 LINE L2 -5 3308 2684 823 132 0 44 chr2 199187094 199187230 -54069353 + FLAM_C SINE Alu 1 130 -3 870 138 0 15 chr2 199187772 199187902 -54068681 - FLAM_C SINE Alu -5 128 1 266 263 42 53 chr2 199188059 199188154 -54068429 + L1MC4a LINE L1 5584 5677 -2131 497 207 97 28 chr2 199188154 199188299 -54068284 - MER104 DNA Tc2 -20 160 6 474 241 90 8 chr2 199188304 199188437 -54068146 + L1MC4a LINE L1 5682 5825 -1983 2496 82 0 0 chr2 199188527 199188831 -54067752 + AluSc SINE Alu 6 309 0 466 295 6 36 chr2 199188833 199188999 -54067584 + HAL1 LINE L1 2341 2501 -6 470 289 19 13 chr2 199189272 199189431 -54067152 - MER5A DNA MER1_type -3 186 27 219 239 70 42 chr2 199190780 199190851 -54065732 + MIR3 SINE MIR 135 207 -1 2842 166 63 15 chr2 199191294 199191819 -54064764 + MER44D DNA MER2_type 1 605 0 601 301 53 32 chr2 199192156 199192591 -54063992 - L1ME4a LINE L1 -295 5826 5383 2018 102 56 7 chr2 199193887 199194171 -54062412 - AluSx SINE Alu -14 298 1 540 304 136 55 chr2 199194388 199195117 -54061466 + L1MEd LINE L1 413 1200 -5330 1427 54 0 0 chr2 199195258 199195425 -54061158 - AluY SINE Alu -15 296 130 251 315 78 26 chr2 199195426 199195639 -54060944 + L1MEd LINE L1 1837 2099 -4517 273 275 58 35 chr2 199195683 199195854 -54060729 + L1MEd LINE L1 2515 2689 -3851 832 153 15 0 chr2 199195864 199195995 -54060588 + AluJ SINE Alu 1 133 -169 435 119 0 0 chr2 199196007 199196074 -54060509 + (GGAA)n Simple_repeat Simple_repeat 3 69 0 984 186 12 0 chr2 199196074 199196246 -54060337 + AluJ SINE Alu 122 295 -17 308 339 0 8 chr2 199196251 199196369 -54060214 + L1MEd LINE L1 2683 2799 -3741 929 266 168 22 chr2 199196374 199197000 -54059583 + L1MEd LINE L1 2904 3680 -2860 1203 207 5 0 chr2 199197000 199197222 -54059361 - MER58A DNA MER1_type 0 224 2 929 266 168 22 chr2 199197222 199197415 -54059168 + L1MEd LINE L1 3680 3843 -2697 22 56 0 0 chr2 199198262 199198298 -54058285 + AT_rich Low_complexity Low_complexity 1 36 0 1445 174 56 17 chr2 199199365 199199652 -54056931 + AluJb SINE Alu 1 298 -14 242 338 38 60 chr2 199199684 199199817 -54056766 - L2 LINE L2 -27 3245 3116 21 0 0 0 chr2 199200277 199200298 -54056285 + AT_rich Low_complexity Low_complexity 1 21 0 458 226 89 24 chr2 199201815 199201939 -54054644 - MIR SINE MIR -12 250 119 195 200 0 22 chr2 199203074 199203119 -54053464 - MER5B DNA MER1_type -28 150 107 320 320 52 29 chr2 199205096 199205268 -54051315 + L2 LINE L2 2083 2258 -1056 188 243 138 134 chr2 199205539 199205786 -54050797 + L2 LINE L2 2249 2496 -818 183 295 66 82 chr2 199206402 199206524 -54050059 + L2 LINE L2 3148 3267 -5 707 94 89 2 chr2 199207518 199207692 -54048891 + MER30B DNA MER1_type 1 230 0 22 0 0 0 chr2 199208050 199208072 -54048511 + AT_rich Low_complexity Low_complexity 1 22 0 469 183 0 0 chr2 199208950 199209032 -54047551 + FLAM_A SINE Alu 36 117 -25 423 288 102 122 chr2 199210873 199211807 -54044776 + L1M2 LINE L1 472 1386 -5463 198 0 0 0 chr2 199212057 199212079 -54044504 + (A)n Simple_repeat Simple_repeat 1 22 0 2222 87 3 0 chr2 199212595 199212894 -54043689 + AluSq SINE Alu 14 313 0 269 351 27 9 chr2 199214541 199214652 -54041931 - L2 LINE L2 0 3272 3160 503 218 82 0 chr2 199214901 199215011 -54041572 + L2 LINE L2 3194 3312 -1 23 0 0 0 chr2 199215232 199215255 -54041328 + AT_rich Low_complexity Low_complexity 1 23 0 2344 107 8 8 chr2 199215686 199216041 -54040542 - L1PA14 LINE L1 -1 6160 5806 1283 187 74 46 chr2 199216253 199216643 -54039940 - MER113 DNA MER1_type? -43 478 78 1578 146 8 8 chr2 199216648 199216898 -54039685 - AluJb SINE Alu -9 303 64 653 280 103 22 chr2 199216929 199217161 -54039422 - MIR SINE MIR 0 262 12 198 0 0 0 chr2 199217550 199217572 -54039011 + (A)n Simple_repeat Simple_repeat 1 22 0 186 280 0 40 chr2 199218457 199218507 -54038076 - L3 LINE CR1 -7 1570 1523 * 224 240 60 0 chr2 199218481 199218531 -54038052 - MIR3 SINE MIR -33 175 123 405 0 0 0 chr2 199219763 199219808 -54036775 + (A)n Simple_repeat Simple_repeat 1 45 0 307 282 118 59 chr2 199220206 199220376 -54036207 + L1ME4a LINE L1 5489 5668 -2140 22 35 0 0 chr2 199220439 199220468 -54036115 + AT_rich Low_complexity Low_complexity 1 29 0 559 169 20 27 chr2 199220543 199220648 -54035935 + L1ME4a LINE L1 5975 6080 -41 2274 116 0 0 chr2 199220648 199220959 -54035624 + AluY SINE Alu 1 311 0 559 169 20 27 chr2 199220959 199221001 -54035582 + L1ME4a LINE L1 6080 6121 0 283 271 56 51 chr2 199223224 199223438 -54033145 + L1ME3 LINE L1 5942 6156 -6 368 284 12 59 chr2 199223457 199223626 -54032957 - MER5A DNA MER1_type -28 161 1 787 264 71 30 chr2 199224377 199224451 -54032132 + L1ME3A LINE L1 5450 5519 -651 1658 178 7 0 chr2 199224451 199224721 -54031862 + AluJo SINE Alu 21 292 -20 787 264 71 30 chr2 199224721 199225079 -54031504 + L1ME3A LINE L1 5519 5875 -295 1641 164 14 20 chr2 199225080 199225372 -54031211 + AluJo SINE Alu 1 290 -22 313 206 110 0 chr2 199226380 199226453 -54030130 + L1MC5 LINE L1 7849 7929 -32 1643 208 0 10 chr2 199226509 199226807 -54029776 - AluJo SINE Alu -17 295 1 213 282 59 136 chr2 199226900 199226982 -54029601 - L2 LINE L2 -9 3263 3176 2461 91 0 0 chr2 199226982 199227290 -54029293 + AluSq SINE Alu 1 308 -5 213 282 59 136 chr2 199227290 199227679 -54028904 - L2 LINE L2 -96 3176 2828 249 128 244 12 chr2 199227691 199227777 -54028806 + L1ME4a LINE L1 5997 6102 -19 2045 160 0 3 chr2 199228510 199228822 -54027761 - AluJb SINE Alu -1 311 1 837 157 0 15 chr2 199229581 199229715 -54026868 - FLAM_C SINE Alu -1 132 1 7665 115 28 25 chr2 199229786 199230103 -54026480 - HSMAR2 DNA Mariner -9 1293 978 1946 93 58 0 chr2 199230103 199230362 -54026221 + AluSg SINE Alu 24 297 -13 7665 115 28 25 chr2 199230362 199231333 -54025250 - HSMAR2 DNA Mariner -324 978 1 197 347 99 33 chr2 199231350 199231471 -54025112 + L2 LINE L2 3136 3264 -8 404 263 20 0 chr2 199233354 199233453 -54023130 - L2 LINE L2 0 3272 3172 240 35 0 0 chr2 199234113 199234142 -54022441 + (TC)n Simple_repeat Simple_repeat 1 29 0 22 35 0 0 chr2 199234225 199234254 -54022329 + AT_rich Low_complexity Low_complexity 1 29 0 2010 151 34 11 chr2 199234309 199234666 -54021917 + MLT1A1 LTR MaLR 1 365 0 3846 159 75 0 chr2 199235002 199235761 -54020822 - L1MB7 LINE L1 0 6184 5369 * 5907 143 33 33 chr2 199235755 199236473 -54020110 - L1MA4 LINE L1 -271 6029 5313 715 192 8 0 chr2 199236473 199236593 -54019990 - FLAM_A SINE Alu -12 121 1 5907 143 33 33 chr2 199236593 199237789 -54018794 - L1MA4 LINE L1 -987 5313 4106 3583 211 123 34 chr2 199237786 199238160 -54018423 - L1MB7 LINE L1 -810 5336 4997 * 1486 178 6 67 chr2 199238160 199238475 -54018108 - AluJo SINE Alu -16 296 1 1920 126 49 0 chr2 199238484 199238769 -54017814 - AluSx SINE Alu -13 299 1 3583 211 123 34 chr2 199238769 199239119 -54017464 - L1MB7 LINE L1 -1156 4990 4673 2073 151 0 31 chr2 199239119 199239477 -54017106 + MER7A DNA MER2_type 1 345 -1 3583 211 123 34 chr2 199239477 199239993 -54016590 - L1MB7 LINE L1 -1473 4673 3973 217 0 29 29 chr2 199240135 199240169 -54016414 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1602 166 51 14 chr2 199241070 199241365 -54015218 - AluJo SINE Alu -6 306 1 823 173 15 0 chr2 199241365 199241498 -54015085 - AluJo SINE Alu -177 135 1 1761 169 14 7 chr2 199241719 199242014 -54014569 + AluJo SINE Alu 1 297 -15 1489 187 0 54 chr2 199243454 199243769 -54012814 - AluJb SINE Alu -14 298 1 3011 211 50 57 chr2 199244750 199245597 -54010986 + MER21B LTR ERV1 12 852 -11 5180 64 1 41 chr2 199245695 199246446 -54010137 + PABL_A-int LTR ERV1 179 899 -4116 * 22196 70 48 50 chr2 199246438 199246706 -54009877 + PABL_A-int LTR ERV1 1151 1418 -3597 2211 91 7 14 chr2 199246706 199247003 -54009580 + AluSx SINE Alu 1 295 -17 22196 70 48 50 chr2 199247003 199248142 -54008441 + PABL_A-int LTR ERV1 1418 2558 -2457 2467 83 0 0 chr2 199248142 199248443 -54008140 + AluSg SINE Alu 1 301 -9 22196 70 48 50 chr2 199248443 199250906 -54005677 + PABL_A-int LTR ERV1 2558 5015 0 4965 68 12 11 chr2 199250906 199251565 -54005018 + PABL_A LTR ERV1 1 660 0 1022 169 77 20 chr2 199251596 199251844 -54004739 - Tigger7 DNA MER2_type 0 2491 2230 4615 150 35 16 chr2 199251845 199252667 -54003916 - Tigger7 DNA MER2_type -1649 838 1 272 208 0 0 chr2 199252667 199252714 -54003869 + LTR16A LTR ERVL 399 445 -5 676 123 16 8 chr2 199252824 199252946 -54003637 + L1MB3 LINE L1 6058 6180 -3 577 248 75 6 chr2 199253083 199253244 -54003339 - MER5B DNA MER1_type -6 172 1 473 249 62 57 chr2 199253794 199253862 -54002721 - MIR SINE MIR -10 252 186 2273 99 7 0 chr2 199253862 199254166 -54002417 - AluSx SINE Alu -6 306 1 473 249 62 57 chr2 199254166 199254290 -54002293 - MIR SINE MIR -76 186 59 340 313 81 104 chr2 199254567 199254920 -54001663 - L2 LINE L2 -4 3268 2926 2057 105 3 27 chr2 199254920 199255254 -54001329 + AluSx SINE Alu 1 312 0 340 313 81 104 chr2 199255254 199255344 -54001239 - L2 LINE L2 -346 2926 2835 219 333 118 13 chr2 199255548 199255701 -54000882 - L2 LINE L2 -770 2544 2376 298 291 133 26 chr2 199255897 199256048 -54000535 + MIR SINE MIR 9 175 -87 24 32 0 0 chr2 199257421 199257452 -53999131 + AT_rich Low_complexity Low_complexity 1 31 0 239 250 0 0 chr2 199257856 199257912 -53998671 + MLT1K LTR MaLR 169 224 -364 2035 152 75 5 chr2 199258021 199258410 -53998173 + MLT2C2 LTR ERVL 1 416 -48 290 119 0 0 chr2 199258469 199258523 -53998060 + MLT2B1 LTR ERVL 480 520 0 220 287 102 46 chr2 199258711 199258819 -53997764 + L2 LINE L2 3149 3262 -10 2055 179 86 5 chr2 199259167 199259598 -53996985 - MLT1C LTR MaLR -1 466 1 1998 145 38 74 chr2 199259754 199260202 -53996381 - MSTB1 LTR MaLR 0 432 1 26 30 0 0 chr2 199261003 199261036 -53995547 + AT_rich Low_complexity Low_complexity 1 33 0 969 141 12 137 chr2 199262367 199262616 -53993967 + MER20 DNA MER1_type 1 218 -1 1594 166 20 20 chr2 199263319 199263615 -53992968 - AluJo SINE Alu -16 296 1 7033 56 11 2 chr2 199264192 199265484 -53991099 - L1PA7 LINE L1 -8 6146 4850 943 160 51 0 chr2 199265860 199266016 -53990567 + FRAM SINE Alu 1 160 -16 577 327 52 90 chr2 199266026 199266731 -53989852 - L2 LINE L2 -13 3300 2618 265 259 71 12 chr2 199266902 199266987 -53989596 + MLT1J LTR MaLR 2 91 -420 241 222 67 33 chr2 199267982 199268072 -53988511 + MIR SINE MIR 129 221 -41 288 265 215 48 chr2 199268263 199268477 -53988106 - MIR SINE MIR -9 253 5 325 317 87 19 chr2 199268617 199268778 -53987805 + L2 LINE L2 3134 3305 -8 192 77 0 0 chr2 199269098 199269124 -53987459 + (CA)n Simple_repeat Simple_repeat 1 26 0 724 119 26 106 chr2 199269680 199269831 -53986752 - LTR40b LTR ERVL -1 461 323 7704 235 42 16 chr2 199269831 199271605 -53984978 - HERVL40 LTR ERVL -1298 4232 2413 448 189 0 57 chr2 199321613 199321697 -53934886 - MIR SINE MIR -71 191 113 2524 174 81 25 chr2 199321697 199322226 -53934357 - MER89 LTR ERV1 0 559 1 448 189 0 57 chr2 199322226 199322247 -53934336 - MIR SINE MIR -149 113 92 772 276 26 4 chr2 199322732 199322960 -53933623 + MLT1L LTR MaLR 383 615 0 882 218 52 28 chr2 199323034 199323282 -53933301 + MIR SINE MIR 9 262 0 21 0 0 0 chr2 199323322 199323343 -53933240 + AT_rich Low_complexity Low_complexity 1 21 0 2370 96 0 0 chr2 199323619 199323920 -53932663 - AluY SINE Alu 0 311 11 1066 244 26 68 chr2 199324198 199324343 -53932240 - MLT1I LTR MaLR 0 409 259 686 234 176 0 chr2 199324343 199324531 -53932052 - MER58A DNA MER1_type -1 223 3 1066 244 26 68 chr2 199324531 199324812 -53931771 - MLT1I LTR MaLR -150 259 1 477 50 0 0 chr2 199325252 199325312 -53931271 + (TG)n Simple_repeat Simple_repeat 2 61 0 207 186 0 0 chr2 199325539 199325582 -53931001 + CT-rich Low_complexity Low_complexity 2 44 0 302 287 54 139 chr2 199325586 199325844 -53930739 - L2 LINE L2 0 3272 3037 584 278 72 59 chr2 199326923 199327384 -53929199 - MLT1J LTR MaLR -44 467 1 2599 55 0 3 chr2 199327422 199327734 -53928849 + AluY SINE Alu 1 311 0 397 196 21 0 chr2 199329044 199329151 -53927432 + L1MA4A LINE L1 6185 6293 -7 1629 195 19 29 chr2 199329428 199329803 -53926780 - MLT1A2 LTR MaLR 0 374 4 2129 114 71 31 chr2 199330425 199330775 -53925808 + THE1B LTR MaLR 1 364 0 301 321 83 0 chr2 199330955 199331064 -53925519 + MER91C DNA MER1_type 23 140 0 1107 138 21 16 chr2 199331552 199331740 -53924843 + MER5A DNA MER1_type 1 189 0 703 174 142 0 chr2 199331755 199331910 -53924673 + MER5B DNA MER1_type 2 178 0 455 369 50 6 chr2 199331919 199332098 -53924485 - MER5A DNA MER1_type 0 189 3 596 261 134 55 chr2 199332453 199332469 -53924114 + MIR SINE MIR 6 19 -243 2090 142 0 7 chr2 199332469 199332779 -53923804 + AluSx SINE Alu 5 312 0 596 261 134 55 chr2 199332779 199333000 -53923583 + MIR SINE MIR 19 262 0 880 145 0 0 chr2 199333657 199333788 -53922795 + FLAM_A SINE Alu 3 133 0 306 301 68 20 chr2 199333799 199333945 -53922638 + L1M4 LINE L1 2409 2561 -3585 590 316 61 0 chr2 199333962 199334174 -53922409 + L2 LINE L2 2622 2846 -468 2324 86 3 3 chr2 199334568 199334869 -53921714 - AluY SINE Alu -10 301 1 352 243 49 7 chr2 199335038 199335182 -53921401 - L1MEd LINE L1 -5942 177 28 1349 260 30 12 chr2 199335407 199335834 -53920749 + L1ME3A LINE L1 5485 5919 -251 1333 229 88 35 chr2 199336632 199337098 -53919485 + HAL1b LINE L1 453 954 -394 2560 50 0 0 chr2 199337098 199337400 -53919183 - AluY SINE Alu -8 303 2 1333 229 88 35 chr2 199337400 199337478 -53919105 + HAL1b LINE L1 954 1026 -322 58 28 0 0 chr2 199337478 199337550 -53919033 + AT_rich Low_complexity Low_complexity 1 72 0 725 223 82 19 chr2 199337585 199337791 -53918792 - L2 LINE L2 0 3313 3095 337 236 49 49 chr2 199337848 199337992 -53918591 + HAL1b LINE L1 1175 1318 -30 1251 196 123 0 chr2 199338107 199338408 -53918175 + L1MD3 LINE L1 5618 5955 -2040 3283 208 3 0 chr2 199338408 199339024 -53917559 + L1 LINE L1 950 1567 -5282 * 11544 165 26 37 chr2 199339021 199339801 -53916782 + L1 LINE L1 3434 4221 -2627 207 69 0 0 chr2 199339801 199339830 -53916753 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1923 128 28 3 chr2 199339832 199340114 -53916469 - AluSx SINE Alu -23 289 1 11544 165 26 37 chr2 199340114 199340817 -53915766 + L1 LINE L1 4222 4931 -1917 2057 131 3 14 chr2 199340817 199341114 -53915469 + AluSx SINE Alu 1 294 -18 11544 165 26 37 chr2 199341114 199341406 -53915177 + L1 LINE L1 4931 5225 -1623 1894 107 55 24 chr2 199341406 199341696 -53914887 + AluSx SINE Alu 1 299 -13 11544 165 26 37 chr2 199341696 199342571 -53914012 + L1 LINE L1 5225 6060 -788 9482 168 19 6 chr2 199342563 199345590 -53910993 + L1PB2 LINE L1 3088 6149 -2 * 313 96 0 0 chr2 199345604 199345656 -53910927 + L1M LINE L1 5355 5406 -897 585 278 59 0 chr2 199345756 199345943 -53910640 - L3b LINE CR1 -284 1299 1102 518 298 93 23 chr2 199346064 199346366 -53910217 - MER102b DNA MER1_type 0 341 19 636 13 0 0 chr2 199346381 199346458 -53910125 - L1PA2 LINE L1 -338 5817 5741 3174 14 0 0 chr2 199346458 199346816 -53909767 + L1PA2 LINE L1 5795 6155 0 237 213 21 0 chr2 199347018 199347065 -53909518 + L2 LINE L2 3262 3309 -4 224 156 44 0 chr2 199347120 199347165 -53909418 - MIR SINE MIR -79 183 137 1856 164 3 13 chr2 199347475 199347785 -53908798 - AluJo SINE Alu -3 309 3 21 0 0 0 chr2 199347882 199347903 -53908680 + AT_rich Low_complexity Low_complexity 1 21 0 1947 101 0 0 chr2 199347905 199348152 -53908431 - AluSq SINE Alu 0 313 67 2777 20 3 0 chr2 199348152 199348453 -53908130 + SVA Other Other 1085 1386 0 637 52 0 0 chr2 199348457 199348534 -53908049 - AluSq SINE Alu -233 79 3 419 232 161 40 chr2 199348609 199348833 -53907750 - L1MC/D LINE L1 -2039 5838 5588 219 327 0 0 chr2 199349309 199349364 -53907219 + C-rich Low_complexity Low_complexity 1 55 0 476 253 34 13 chr2 199349760 199349912 -53906671 + MLT1L LTR MaLR 104 253 -342 566 346 119 19 chr2 199350177 199350375 -53906208 + L2 LINE L2 2923 3166 -106 1569 167 3 73 chr2 199350375 199350692 -53905891 + AluJo SINE Alu 1 295 -17 566 346 119 19 chr2 199350692 199350811 -53905772 + L2 LINE L2 3166 3272 0 662 272 115 18 chr2 199350903 199351283 -53905300 + L1ME4a LINE L1 5552 5981 -140 1632 188 0 26 chr2 199351283 199351587 -53904996 + AluJb SINE Alu 12 307 -5 662 272 115 18 chr2 199351587 199351640 -53904943 + L1ME4a LINE L1 5981 6027 -94 347 325 65 26 chr2 199351770 199351971 -53904612 + MIR SINE MIR 15 216 -46 383 276 89 15 chr2 199352617 199353116 -53903467 - L1MC/D LINE L1 -743 5472 5005 319 322 67 27 chr2 199353118 199353267 -53903316 - L1MC/D LINE L1 -1251 4964 4810 1672 231 27 29 chr2 199353281 199353800 -53902783 - L1MC/D LINE L1 -1886 4329 3812 563 248 79 90 chr2 199353815 199354629 -53901954 - L1MC/D LINE L1 -4616 1780 976 304 243 19 19 chr2 199354736 199354843 -53901740 - L1MC/D LINE L1 -6241 155 49 313 221 0 13 chr2 199354846 199354923 -53901660 - L1MEc LINE L1 -4758 2067 1992 244 247 13 0 chr2 199355009 199355086 -53901497 - L1MEc LINE L1 -5425 1117 1040 558 309 22 26 chr2 199355130 199355402 -53901181 - L1MEc LINE L1 -6091 734 464 332 323 79 30 chr2 199355879 199356182 -53900401 + L2 LINE L2 2994 3311 -2 268 283 30 130 chr2 199356878 199357217 -53899366 - L2 LINE L2 -107 3165 2861 22 35 0 0 chr2 199357911 199357940 -53898643 + AT_rich Low_complexity Low_complexity 1 29 0 182 345 0 35 chr2 199358594 199358681 -53897902 - L2 LINE L2 -2782 532 449 196 304 18 0 chr2 199359043 199359099 -53897484 - L2 LINE L2 -5 3267 3211 22 0 0 0 chr2 199359489 199359511 -53897072 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr2 199359537 199359568 -53897015 + AT_rich Low_complexity Low_complexity 1 31 0 247 308 179 0 chr2 199360561 199360678 -53895905 + L2 LINE L2 3134 3271 -1 257 279 16 0 chr2 199360839 199360900 -53895683 - MIR SINE MIR 0 262 201 608 211 9 0 chr2 199361540 199361654 -53894929 + MIR SINE MIR 53 167 -95 1976 163 7 3 chr2 199361822 199362129 -53894454 - AluJo SINE Alu 0 312 5 561 361 87 31 chr2 199362199 199362615 -53893968 - L2 LINE L2 -11 3261 2823 1382 201 0 26 chr2 199362709 199362982 -53893601 + AluJo SINE Alu 34 299 -13 1175 336 94 29 chr2 199362982 199363819 -53892764 - L2 LINE L2 -618 2696 1805 244 281 16 0 chr2 199363842 199363906 -53892677 - L2 LINE L2 0 3272 3208 2125 134 38 14 chr2 199363909 199364275 -53892308 + THE1C LTR MaLR 1 375 0 281 308 103 67 chr2 199364277 199364530 -53892053 - L2 LINE L2 -2201 1113 852 575 304 101 79 chr2 199364594 199365117 -53891466 + L2 LINE L2 2677 3271 -1 194 194 0 0 chr2 199365120 199365151 -53891432 - MIR SINE MIR -146 116 86 34 0 0 0 chr2 199365175 199365209 -53891374 + AT_rich Low_complexity Low_complexity 1 34 0 267 186 132 70 chr2 199367112 199367241 -53889342 - L1ME4a LINE L1 -7 6114 5978 46 33 0 0 chr2 199367670 199367730 -53888853 + AT_rich Low_complexity Low_complexity 1 60 0 804 281 46 0 chr2 199367741 199367937 -53888646 + MIR SINE MIR 7 211 -51 222 325 123 0 chr2 199368030 199368144 -53888439 + L2 LINE L2 3139 3266 -6 469 227 164 0 chr2 199368291 199368419 -53888164 - MIR SINE MIR -6 256 108 198 171 0 0 chr2 199369972 199370007 -53886576 + L2 LINE L2 3230 3264 -8 374 259 53 38 chr2 199370114 199370245 -53886338 - L2 LINE L2 -1 3312 3180 2187 119 3 3 chr2 199370245 199370548 -53886035 + AluSx SINE Alu 1 303 -9 644 118 0 0 chr2 199371429 199371522 -53885061 - AluSg/x SINE Alu -12 298 206 2183 110 7 10 chr2 199372180 199372489 -53884094 + AluSx SINE Alu 2 309 -3 242 111 0 0 chr2 199372615 199372651 -53883932 + L1MA4A LINE L1 5437 5472 -831 479 154 0 34 chr2 199372652 199372769 -53883814 + (TA)n Simple_repeat Simple_repeat 1 113 0 315 189 21 74 chr2 199372769 199372864 -53883719 - L1MC4 LINE L1 -1339 6703 6614 279 175 0 0 chr2 199372866 199372923 -53883660 + (TA)n Simple_repeat Simple_repeat 1 57 0 1804 120 100 0 chr2 199372923 199373182 -53883401 - AluSg SINE Alu -25 285 1 4830 114 35 16 chr2 199373182 199373508 -53883075 + L1MA4A LINE L1 5460 5778 -525 180 111 0 0 chr2 199373508 199373535 -53883048 + (CA)n Simple_repeat Simple_repeat 2 28 0 4830 114 35 16 chr2 199373535 199374035 -53882548 + L1MA4A LINE L1 5778 6302 -1 1743 171 23 23 chr2 199374057 199374443 -53882140 + L1MC2 LINE L1 5954 6339 -5 429 265 42 36 chr2 199374566 199374732 -53881851 - MIR SINE MIR -78 184 18 212 290 81 64 chr2 199375655 199375938 -53880645 - L2 LINE L2 -340 2974 2687 340 279 150 7 chr2 199376109 199376249 -53880334 - MIR SINE MIR -79 183 24 264 209 45 0 chr2 199376361 199376428 -53880155 + (CATATA)n Simple_repeat Simple_repeat 2 71 0 1140 180 87 59 chr2 199376431 199376720 -53879863 - MER58B DNA MER1_type -42 299 3 245 275 106 42 chr2 199377228 199377370 -53879213 - L2 LINE L2 -23 3290 3140 4208 144 29 20 chr2 199378172 199378966 -53877617 + L1MB3 LINE L1 5381 6181 -2 21 0 0 0 chr2 199380075 199380096 -53876487 + AT_rich Low_complexity Low_complexity 1 21 0 218 250 19 0 chr2 199380736 199380788 -53875795 + L2 LINE L2 3261 3313 0 1307 124 56 0 chr2 199381170 199381420 -53875163 + L1MA5 LINE L1 6037 6300 0 24 0 0 0 chr2 199381422 199381446 -53875137 + AT_rich Low_complexity Low_complexity 1 24 0 265 340 122 6 chr2 199382921 199383077 -53873506 - MIR3 SINE MIR -14 194 21 726 170 7 30 chr2 199383149 199383284 -53873299 + AluJb SINE Alu 3 134 -178 235 229 14 0 chr2 199383288 199383358 -53873225 + GA-rich Low_complexity Low_complexity 3 73 0 1527 156 55 7 chr2 199384001 199384309 -53872274 - MER33 DNA MER1_type 0 324 2 4185 167 158 49 chr2 199384472 199385790 -53870793 - Charlie1 DNA MER1_type 0 2761 1 256 362 45 10 chr2 199386229 199386411 -53870172 + MIR SINE MIR 12 197 -58 608 290 65 23 chr2 199387145 199387362 -53869221 - MIR SINE MIR -34 228 3 1132 99 138 0 chr2 199387473 199387654 -53868929 + MER30 DNA MER1_type 8 213 -17 3649 232 41 44 chr2 199387671 199388244 -53868339 - L1MEc LINE L1 -2526 3689 3116 2190 79 4 0 chr2 199388244 199388511 -53868072 - AluSg SINE Alu -21 289 22 3649 232 41 44 chr2 199388511 199388703 -53867880 - L1MEc LINE L1 -3099 3116 2925 207 0 0 0 chr2 199388703 199388726 -53867857 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 3649 232 41 44 chr2 199388726 199389413 -53867170 - L1MEc LINE L1 -3290 2925 2241 643 266 6 12 chr2 199389432 199389601 -53866982 - L1MEc LINE L1 -5834 562 395 702 248 64 60 chr2 199389635 199389878 -53866705 - L1MEc LINE L1 -6078 318 72 533 154 179 12 chr2 199389878 199390040 -53866543 + MER53 DNA DNA 1 189 0 702 248 64 60 chr2 199390040 199390078 -53866505 - L1MEc LINE L1 -6324 72 36 574 359 26 5 chr2 199390507 199390699 -53865884 + MER91A DNA MER1_type 1 196 0 2200 122 6 10 chr2 199391124 199391436 -53865147 - AluSx SINE Alu -1 311 1 29062 94 7 9 chr2 199391864 199396224 -53860359 + L1P LINE L1 18 4369 -1777 2173 109 0 32 chr2 199398716 199399028 -53857555 + AluSx SINE Alu 1 302 -10 311 378 10 26 chr2 199399137 199399330 -53857253 + L3 LINE CR1 55 244 -1333 2103 117 0 20 chr2 199399631 199399929 -53856654 + AluSx SINE Alu 1 292 -20 182 305 0 0 chr2 199400087 199400146 -53856437 - L2 LINE L2 0 3313 3255 288 313 54 9 chr2 199401384 199401496 -53855087 + L2 LINE L2 2637 2753 -561 32 43 0 0 chr2 199401890 199401936 -53854647 + AT_rich Low_complexity Low_complexity 1 46 0 478 292 39 0 chr2 199401983 199402163 -53854420 - MIR SINE MIR -63 145 9 181 303 172 25 chr2 199404222 199404344 -53852239 - L2 LINE L2 -202 3070 2931 190 324 202 61 chr2 199404474 199404604 -53851979 - L2 LINE L2 -634 2680 2570 1968 94 12 94 chr2 199404604 199404934 -53851649 - AluSx SINE Alu -9 303 1 190 324 202 61 chr2 199404934 199405050 -53851533 - L2 LINE L2 -744 2570 2399 276 248 46 28 chr2 199405056 199405165 -53851418 + (TCTCTG)n Simple_repeat Simple_repeat 2 112 0 242 230 14 14 chr2 199406043 199406117 -53850466 + GA-rich Low_complexity Low_complexity 1 74 0 496 296 19 19 chr2 199406657 199406819 -53849764 + MER5B DNA MER1_type 17 178 0 247 328 108 32 chr2 199407081 199407267 -53849316 - L2 LINE L2 -188 3084 2885 505 250 61 12 chr2 199407527 199407691 -53848892 - MIR SINE MIR -48 214 43 431 290 0 0 chr2 199408629 199408729 -53847854 + MER81 DNA DNA 15 114 0 1659 133 96 12 chr2 199408969 199409293 -53847290 + MLT2D LTR ERVL 1 351 -63 577 83 31 0 chr2 199409293 199409389 -53847194 + (TCTA)n Simple_repeat Simple_repeat 4 102 0 281 296 89 71 chr2 199410590 199410796 -53845787 - HERV16 LTR ERVL -385 5379 5160 1932 111 0 28 chr2 199410796 199411111 -53845472 - AluSx SINE Alu 0 309 3 281 296 89 71 chr2 199411111 199411298 -53845285 - HERV16 LTR ERVL -604 5160 4978 328 209 57 13 chr2 199411445 199411603 -53844980 + (TCTA)n Simple_repeat Simple_repeat 2 166 0 1987 328 72 42 chr2 199411620 199413181 -53843402 - HERV16 LTR ERVL -1065 4699 3093 396 0 0 0 chr2 199413193 199413237 -53843346 + (TG)n Simple_repeat Simple_repeat 2 45 0 525 306 28 41 chr2 199413514 199413805 -53842778 - HERV16 LTR ERVL -4381 615 329 299 231 109 48 chr2 199414076 199414223 -53842360 - LTR16C LTR ERVL 0 491 336 317 341 16 16 chr2 199414816 199414942 -53841641 - MIR3 SINE MIR -6 202 77 263 59 0 6 chr2 199415340 199415380 -53841203 - MADE1 DNA Mariner 0 80 46 350 203 0 0 chr2 199417015 199417084 -53839499 - L1MD2 LINE L1 -116 6243 6175 1970 120 0 14 chr2 199417446 199417730 -53838853 + AluSx SINE Alu 1 280 -32 234 0 0 0 chr2 199417730 199417756 -53838827 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 253 242 42 8 chr2 199417876 199418020 -53838563 + (TA)n Simple_repeat Simple_repeat 1 148 0 4041 209 54 37 chr2 199418022 199419375 -53837208 - L1MD2 LINE L1 -8 6351 4989 440 193 11 0 chr2 199419375 199419463 -53837120 - AluY SINE Alu -6 305 217 562 250 34 28 chr2 199419468 199419644 -53836939 - L1MD2 LINE L1 -1150 4996 4820 2024 170 2 76 chr2 199420014 199420408 -53836175 - MLT1A1 LTR MaLR 0 365 1 2164 95 0 11 chr2 199420836 199421151 -53835432 + AluSg SINE Alu 1 312 0 220 268 0 0 chr2 199421280 199421336 -53835247 + CT-rich Low_complexity Low_complexity 1 56 0 1692 166 40 0 chr2 199421574 199421852 -53834731 - AluJb SINE Alu -23 289 1 1681 194 152 22 chr2 199421932 199422334 -53834249 - MLT1F1 LTR MaLR -113 454 1 626 256 85 6 chr2 199422373 199422537 -53834046 - MER45A DNA AcHobo 0 178 2 435 230 66 92 chr2 199422537 199422733 -53833850 + MIR SINE MIR 8 198 -64 1394 218 55 96 chr2 199424599 199425028 -53831555 + LTR33A LTR ERVL 28 473 -50 1940 148 0 0 chr2 199425028 199425311 -53831272 + AluJo SINE Alu 1 283 -29 248 0 31 0 chr2 199425311 199425343 -53831240 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 1394 218 55 96 chr2 199425343 199425422 -53831161 + LTR33A LTR ERVL 471 516 -7 331 200 120 56 chr2 199427013 199427026 -53829557 - L2 LINE L2 0 3313 3302 189 107 0 0 chr2 199427026 199427054 -53829529 + (CATG)n Simple_repeat Simple_repeat 3 30 0 331 200 120 56 chr2 199427054 199427165 -53829418 - L2 LINE L2 -11 3302 3181 1269 120 0 35 chr2 199427301 199427529 -53829054 + AluSg/x SINE Alu 110 312 0 1482 135 108 42 chr2 199427606 199427894 -53828689 + AluJo SINE Alu 5 311 -1 1646 201 89 15 chr2 199428495 199428833 -53827750 - MLT1A2 LTR MaLR -11 363 1 208 327 73 45 chr2 199429931 199430041 -53826542 + L2 LINE L2 3150 3262 -10 248 211 296 0 chr2 199431147 199431218 -53825365 - L2 LINE L2 -22 3291 3200 29 0 0 0 chr2 199432158 199432187 -53824396 + AT_rich Low_complexity Low_complexity 1 29 0 2820 112 35 9 chr2 199432282 199432709 -53823874 - Tigger2 DNA MER2_type 0 2718 2281 518 220 28 14 chr2 199432712 199432853 -53823730 + MIR SINE MIR 116 258 -4 1590 165 0 53 chr2 199433101 199433386 -53823197 + AluJo SINE Alu 12 281 -31 21 0 0 0 chr2 199433386 199433407 -53823176 + AT_rich Low_complexity Low_complexity 1 21 0 2397 93 0 0 chr2 199434033 199434334 -53822249 - AluSg SINE Alu -9 301 1 313 267 0 0 chr2 199435120 199435180 -53821403 + MIR SINE MIR 14 73 -189 1186 238 172 48 chr2 199435180 199435640 -53820943 - MLT1G3 LTR MaLR 0 555 5 350 211 202 18 chr2 199435673 199435787 -53820796 + MIR SINE MIR 107 241 -21 472 264 149 0 chr2 199439178 199439326 -53817257 - MIR SINE MIR 0 262 93 2634 162 56 0 chr2 199439337 199439733 -53816850 - MER47B DNA MER2_type 0 418 1 212 256 163 47 chr2 199441657 199441786 -53814797 - MIR SINE MIR -16 246 103 181 355 16 0 chr2 199443594 199443656 -53812927 - MIR3 SINE MIR -6 202 140 329 257 38 0 chr2 199444178 199444283 -53812300 + MER103 DNA DNA 52 160 -6 309 288 71 29 chr2 199444807 199445088 -53811495 - L1M4 LINE L1 -1542 4604 4312 2304 97 13 3 chr2 199445219 199445527 -53811056 - AluSp SINE Alu -2 311 1 1385 211 57 0 chr2 199445529 199445808 -53810775 - AluJo SINE Alu -17 295 1 450 268 107 86 chr2 199445877 199445940 -53810643 - L2 LINE L2 0 3313 3253 1758 166 7 10 chr2 199445940 199446242 -53810341 - AluJo SINE Alu -7 305 5 450 268 107 86 chr2 199446242 199446563 -53810020 - L2 LINE L2 -60 3253 2921 180 0 0 0 chr2 199446919 199446939 -53809644 + (CAGGT)n Simple_repeat Simple_repeat 2 21 0 757 265 28 24 chr2 199447209 199447458 -53809125 + MIR SINE MIR 13 262 0 247 282 78 0 chr2 199447585 199447688 -53808895 + L1ME4a LINE L1 5965 6075 -46 22 0 0 0 chr2 199447713 199447735 -53808848 + AT_rich Low_complexity Low_complexity 1 22 0 3051 155 75 12 chr2 199449077 199449638 -53806945 - MER7C DNA MER2_type -5 597 2 473 308 53 16 chr2 199450488 199450735 -53805848 - L1ME4a LINE L1 -264 5857 5602 584 274 50 30 chr2 199452432 199452633 -53803950 - MLT1I LTR MaLR -4 405 201 365 284 117 31 chr2 199453214 199453376 -53803207 - MER91A DNA MER1_type -19 177 2 292 239 57 11 chr2 199455935 199456023 -53800560 - MIR SINE MIR -76 132 41 22 0 0 0 chr2 199456205 199456227 -53800356 + AT_rich Low_complexity Low_complexity 1 22 0 1925 206 16 22 chr2 199459139 199459508 -53797075 - MLT1A2 LTR MaLR -4 370 4 3483 154 28 2 chr2 199460005 199460584 -53795999 - L1MB3 LINE L1 -1 6182 5589 187 239 141 84 chr2 199460620 199460833 -53795750 - L2 LINE L2 -557 2757 2533 274 267 14 96 chr2 199461423 199461569 -53795014 + L2 LINE L2 3139 3272 0 235 238 63 0 chr2 199461579 199461642 -53794941 - L3b LINE CR1 -85 1498 1432 207 375 50 38 chr2 199462041 199462201 -53794382 - L2 LINE L2 -21 3251 3090 781 187 0 43 chr2 199462409 199462548 -53794035 + FLAM_C SINE Alu 1 133 0 21 0 0 0 chr2 199462765 199462786 -53793797 + AT_rich Low_complexity Low_complexity 1 21 0 742 294 76 74 chr2 199463948 199464129 -53792454 - MLT1K LTR MaLR -2 586 407 2332 106 0 13 chr2 199464129 199464440 -53792143 - AluSx SINE Alu -5 307 1 742 294 76 74 chr2 199464440 199464704 -53791879 - MLT1K LTR MaLR -181 407 140 2375 95 3 0 chr2 199465916 199466221 -53790362 - AluSg1 SINE Alu -3 306 1 591 239 97 0 chr2 199467337 199467492 -53789091 + MIR SINE MIR 85 254 -8 2211 155 46 3 chr2 199469104 199469452 -53787131 - MLT1A1 LTR MaLR -2 363 1 283 317 106 47 chr2 199471333 199471655 -53784928 - MLT1K LTR MaLR -75 513 173 849 241 35 0 chr2 199473196 199473395 -53783188 - MLT1E1 LTR MaLR -1 653 448 275 269 125 39 chr2 199474399 199474503 -53782080 + MIR SINE MIR 32 144 -64 1031 227 16 24 chr2 199474505 199474752 -53781831 - MIR SINE MIR 0 262 18 263 260 188 0 chr2 199475473 199475569 -53781014 + MIR SINE MIR 123 236 -26 1972 152 0 3 chr2 199475655 199475951 -53780632 - AluSx SINE Alu -17 295 1 262 304 68 34 chr2 199477010 199477158 -53779425 + MIR SINE MIR 25 177 -85 1932 149 7 0 chr2 199477668 199477969 -53778614 + AluJb SINE Alu 1 303 -9 445 246 41 92 chr2 199478128 199478263 -53778320 - MIR SINE MIR -1 261 137 2335 81 0 7 chr2 199478263 199478560 -53778023 + AluSq SINE Alu 1 295 -18 445 246 41 92 chr2 199478560 199478619 -53777964 - MIR SINE MIR -125 137 77 1224 134 16 0 chr2 199479027 199479214 -53777369 - L1MB3 LINE L1 -328 5855 5666 562 128 13 0 chr2 199479816 199479894 -53776689 - MADE1 DNA Mariner -1 79 1 527 255 22 97 chr2 199481588 199481855 -53774728 - MER112 DNA MER1_type -11 249 3 333 264 27 27 chr2 199482122 199482232 -53774351 + MER5B DNA MER1_type 1 110 -68 272 296 0 23 chr2 199482585 199482673 -53773910 + CT-rich Low_complexity Low_complexity 5 90 0 2547 135 152 29 chr2 199483396 199483933 -53772650 - MER4B LTR ERV1 0 903 1 908 244 117 104 chr2 199483937 199484477 -53772106 - MLT1H LTR MaLR 0 549 3 3726 125 49 0 chr2 199484513 199485041 -53771542 - MER41A LTR ERV1 0 554 1 357 264 23 0 chr2 199485184 199485271 -53771312 - L2 LINE L2 -2 3311 3223 23 33 0 0 chr2 199487525 199487555 -53769028 + AT_rich Low_complexity Low_complexity 1 30 0 937 178 77 24 chr2 199488918 199489126 -53767457 + MER20 DNA MER1_type 1 219 0 395 305 175 19 chr2 199489587 199489741 -53766842 + MER5A DNA MER1_type 7 184 -5 653 242 146 17 chr2 199489844 199490022 -53766561 - MIR SINE MIR -4 258 58 216 251 171 48 chr2 199490532 199490719 -53765864 + L2 LINE L2 2834 3043 -229 336 245 31 98 chr2 199490849 199491012 -53765571 + MIR SINE MIR 47 198 -64 2264 87 7 13 chr2 199491498 199491798 -53764785 - AluSg SINE Alu -12 298 1 745 161 54 31 chr2 199491798 199491928 -53764655 - FLAM_A SINE Alu 0 133 1 1661 144 70 29 chr2 199492543 199492884 -53763699 + MER46B DNA MER2_type 2 231 -5 211 259 139 60 chr2 199493026 199493227 -53763356 + L2 LINE L2 2687 2903 -411 642 192 8 24 chr2 199494655 199494780 -53761803 - L2 LINE L2 0 3313 3191 2157 108 3 0 chr2 199495447 199495757 -53760826 + AluSp SINE Alu 1 311 0 245 342 242 0 chr2 199496686 199496806 -53759777 - L2 LINE L2 -1 3271 3123 286 239 15 0 chr2 199496841 199496908 -53759675 - MER94 DNA DNA -12 122 55 817 283 81 70 chr2 199497094 199497629 -53758954 - L2 LINE L2 0 3313 2778 1740 235 113 86 chr2 199498037 199498122 -53758461 - MER21B LTR ERV1 -60 803 722 4488 114 19 17 chr2 199498122 199498754 -53757829 - MER41B LTR ERV1 -2 633 1 1740 235 113 86 chr2 199498754 199499450 -53757133 - MER21B LTR ERV1 -141 722 1 1924 258 200 41 chr2 199499674 199501143 -53755440 + L2 LINE L2 1597 3313 0 2148 130 0 0 chr2 199501368 199501661 -53754922 - AluSx SINE Alu -19 293 1 241 182 39 39 chr2 199503845 199503922 -53752661 - Charlie7 DNA MER1_type -109 2503 2427 * 471 187 22 11 chr2 199503911 199504002 -53752581 - Charlie7 DNA MER1_type -2516 96 5 271 253 51 0 chr2 199504156 199504235 -53752348 - MLT1I LTR MaLR -3 406 324 * 373 268 39 24 chr2 199504203 199504330 -53752253 - MLT1J2 LTR MaLR -48 402 274 826 124 0 0 chr2 199504356 199504477 -53752106 - AluSp/q SINE Alu 0 313 193 399 33 83 33 chr2 199554477 199554537 -53702046 - THE1B LTR MaLR -301 63 1 1073 119 23 11 chr2 199554537 199554713 -53701870 + L1MB3 LINE L1 6005 6182 -1 830 290 91 33 chr2 199555033 199555485 -53701098 - L1ME3 LINE L1 -332 5830 5353 467 288 30 0 chr2 199555490 199555622 -53700961 + L2 LINE L2 3178 3313 0 1227 291 121 0 chr2 199556584 199557031 -53699552 + L2 LINE L2 2805 3305 -8 696 199 31 77 chr2 199557460 199557685 -53698898 - L1MC4 LINE L1 -1211 6597 6402 336 253 0 0 chr2 199557779 199557854 -53698729 - L1MC4a LINE L1 -1373 6435 6361 1140 199 69 39 chr2 199557883 199558007 -53698576 - L1ME2 LINE L1 -21 6143 6024 2698 129 3 3 chr2 199558007 199558371 -53698212 + THE1B LTR MaLR 1 364 0 1140 199 69 39 chr2 199558371 199558552 -53698031 - L1ME2 LINE L1 -140 6024 5829 1859 217 52 23 chr2 199558586 199558714 -53697869 - L1ME2 LINE L1 -545 5619 5496 2097 116 17 7 chr2 199558714 199559015 -53697568 - AluSx SINE Alu -8 304 1 1859 217 52 23 chr2 199559015 199559608 -53696975 - L1ME2 LINE L1 -668 5496 4878 1887 156 0 17 chr2 199561056 199561358 -53695225 + AluJb SINE Alu 1 297 -15 2091 125 3 3 chr2 199561675 199561972 -53694611 - AluSx SINE Alu -15 297 1 335 219 68 0 chr2 199562533 199562606 -53693977 + MIR SINE MIR 76 153 -109 1277 91 63 0 chr2 199562628 199562803 -53693780 + LTR9B LTR ERV1 1 186 -458 2299 81 7 3 chr2 199562803 199563100 -53693483 + AluY SINE Alu 1 298 -13 3441 128 16 6 chr2 199563118 199563627 -53692956 + LTR9B LTR ERV1 131 644 0 3577 188 75 12 chr2 199563690 199564380 -53692203 - MER50 LTR ERV1 0 734 1 953 156 156 16 chr2 199564490 199564682 -53691901 + MER4B LTR ERV1 1 219 -391 1755 108 48 19 chr2 199564682 199564950 -53691633 + AluSg SINE Alu 1 276 -34 1481 133 20 102 chr2 199565140 199565202 -53691381 - MER33 DNA MER1_type -2262 323 257 2507 47 13 0 chr2 199565202 199565371 -53691212 - AluY SINE Alu -9 302 126 225 0 0 0 chr2 199565371 199565396 -53691187 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2507 47 13 0 chr2 199565396 199565524 -53691059 - AluY SINE Alu -185 126 1 1481 133 20 102 chr2 199565524 199565813 -53690770 - MER33 DNA MER1_type -2328 257 1 1004 172 12 0 chr2 199566131 199566300 -53690283 + MLT2D LTR ERVL 11 181 -233 1632 229 34 36 chr2 199566307 199566333 -53690250 + L1MC4a LINE L1 6081 6106 -1702 1092 203 27 45 chr2 199566333 199566555 -53690028 + MER20 DNA MER1_type 2 219 0 1632 229 34 36 chr2 199566555 199566970 -53689613 + L1MC4a LINE L1 6106 7808 0 2239 111 3 0 chr2 199566999 199567297 -53689286 + AluSx SINE Alu 1 299 -13 2117 104 3 10 chr2 199567336 199567625 -53688958 + AluSc SINE Alu 6 292 -17 22 35 0 0 chr2 199567876 199567905 -53688678 + AT_rich Low_complexity Low_complexity 1 29 0 223 84 84 12 chr2 199567949 199568032 -53688551 + (TA)n Simple_repeat Simple_repeat 1 89 0 53 49 0 0 chr2 199568032 199568113 -53688470 + AT_rich Low_complexity Low_complexity 1 81 0 25 31 0 0 chr2 199568848 199568880 -53687703 + AT_rich Low_complexity Low_complexity 1 32 0 1617 103 0 5 chr2 199569118 199569331 -53687252 - AluSc SINE Alu -95 214 3 880 172 47 12 chr2 199569451 199569620 -53686963 - MER5B DNA MER1_type -3 175 1 1831 82 145 0 chr2 199569678 199569947 -53686636 + AluSx SINE Alu 1 308 -4 221 232 0 18 chr2 199570287 199570343 -53686240 + L2 LINE L2 3193 3247 -66 635 268 30 20 chr2 199571215 199571413 -53685170 + MIR SINE MIR 46 245 -17 418 136 0 15 chr2 199571821 199571887 -53684696 - U6 snRNA snRNA -42 65 1 725 105 72 59 chr2 199571998 199572150 -53684433 - L1MB3 LINE L1 -321 5862 5709 183 42 0 0 chr2 199573006 199573030 -53683553 + (TG)n Simple_repeat Simple_repeat 1 24 0 184 250 340 0 chr2 199573152 199573252 -53683331 - MIR SINE MIR -70 192 59 2369 125 15 39 chr2 199574327 199574734 -53681849 - MER4E LTR ERV1 0 766 370 583 47 19 47 chr2 199574984 199575091 -53681492 + (TAGA)n Simple_repeat Simple_repeat 2 105 0 2430 199 113 21 chr2 199575092 199575657 -53680926 + L1MC4 LINE L1 6703 7331 -711 1987 123 7 32 chr2 199575657 199575966 -53680617 + AluSx SINE Alu 11 311 -1 2430 199 113 21 chr2 199575966 199576018 -53680565 + L1MC4 LINE L1 7331 7377 -665 5218 67 73 0 chr2 199576058 199576699 -53679884 - LTR12 LTR ERV1 0 688 1 481 258 0 0 chr2 199576754 199576878 -53679705 + L1MC4 LINE L1 7918 8041 -1 1414 256 46 8 chr2 199576880 199577270 -53679313 - L2 LINE L2 -713 2601 2197 367 245 92 46 chr2 199577945 199578141 -53678442 - L1ME3A LINE L1 -1 6169 5965 * 2515 224 43 56 chr2 199578137 199578876 -53677707 - L1MC5 LINE L1 -580 7381 6629 2024 95 14 7 chr2 199578876 199579159 -53677424 - AluSp SINE Alu -4 309 25 2515 224 43 56 chr2 199579159 199579312 -53677271 - L1MC5 LINE L1 -1332 6629 6476 348 276 230 8 chr2 199579504 199579765 -53676818 - HAL1b LINE L1 -642 706 388 2323 276 91 46 chr2 199579978 199580986 -53675597 + L2 LINE L2 1296 2349 -965 2207 101 0 26 chr2 199581356 199581663 -53674920 - AluSx SINE Alu -13 299 1 1367 286 99 16 chr2 199582831 199583617 -53672966 + L2 LINE L2 2343 3183 -130 1011 245 185 0 chr2 199583622 199583908 -53672675 + MLT1G LTR MaLR 2 340 -250 2139 63 11 7 chr2 199584050 199584334 -53672249 - LTR10C LTR ERV1 -306 285 1 247 308 39 0 chr2 199584335 199584413 -53672170 - L2 LINE L2 -226 3046 2966 271 300 36 18 chr2 199584593 199584703 -53671880 + MIR3 SINE MIR 96 207 -1 * 708 285 83 60 chr2 199584701 199585064 -53671519 - L3 LINE CR1 -341 1236 860 3396 143 71 56 chr2 199585064 199585231 -53671352 + LTR9 LTR ERV1 1 164 -448 2427 68 0 26 chr2 199585231 199585540 -53671043 - AluY SINE Alu -10 301 1 3396 143 71 56 chr2 199585540 199585975 -53670608 + LTR9 LTR ERV1 164 612 0 708 285 83 60 chr2 199585975 199586043 -53670540 - L3 LINE CR1 -717 860 795 29 0 0 0 chr2 199586145 199586174 -53670409 + AT_rich Low_complexity Low_complexity 1 29 0 5249 204 65 26 chr2 199587593 199587614 -53668969 - L1M4 LINE L1 -4940 1915 1896 1887 173 7 0 chr2 199587614 199587914 -53668669 - AluJo SINE Alu -8 304 3 5249 204 65 26 chr2 199587914 199589446 -53667137 - L1M4 LINE L1 -4959 1896 216 1560 226 99 96 chr2 199589486 199590182 -53666401 + MER61E LTR ERV1 1 566 -3 853 188 52 26 chr2 199590187 199590379 -53666204 - L1M4 LINE L1 -6652 207 11 237 289 0 36 chr2 199590382 199590465 -53666118 + MER91B DNA MER1_type 50 129 -61 411 221 11 21 chr2 199590490 199590585 -53665998 + MER91B DNA MER1_type 97 190 0 432 188 188 73 chr2 199590658 199590729 -53665854 + MER91B DNA MER1_type 2 63 -127 1793 271 78 12 chr2 199590729 199591216 -53665367 + LTR33 LTR ERVL 1 519 -2 432 188 188 73 chr2 199591216 199591309 -53665274 + MER91B DNA MER1_type 63 185 -5 198 342 70 51 chr2 199591436 199591594 -53664989 - L2 LINE L2 -609 2705 2545 507 276 71 62 chr2 199591758 199591968 -53664615 - MIR SINE MIR -11 251 40 434 263 18 0 chr2 199592170 199592284 -53664299 - MIR SINE MIR 0 262 147 257 259 188 18 chr2 199592297 199592409 -53664174 + L2 LINE L2 3182 3312 -1 * 336 273 160 9 chr2 199592408 199592537 -53664046 - MIR SINE MIR -66 142 3 370 290 30 0 chr2 199593808 199593908 -53662675 - MIR3 SINE MIR -6 202 100 929 263 139 7 chr2 199594271 199594545 -53662038 + MLT2E LTR ERVL 1 310 -318 397 280 68 0 chr2 199594654 199594772 -53661811 + MLT1E1 LTR MaLR 529 654 0 1957 236 18 26 chr2 199594898 199595399 -53661184 + LTR31 LTR ERV1 105 601 -18 635 193 95 38 chr2 199595415 199595600 -53660983 - MLT1E LTR MaLR -283 371 70 2095 176 21 6 chr2 199595661 199595990 -53660593 - MER1B DNA MER1_type 0 337 4 5735 236 59 53 chr2 199596015 199596538 -53660045 - L1MEc LINE L1 -1898 4317 3799 2262 99 7 0 chr2 199596538 199596830 -53659753 - AluSc SINE Alu -14 295 2 5735 236 59 53 chr2 199596830 199597101 -53659482 - L1MEc LINE L1 -2416 3799 3531 5467 44 3 6 chr2 199597101 199597732 -53658851 - SVA Other Other 0 1386 758 5735 236 59 53 chr2 199597732 199598098 -53658485 - L1MEc LINE L1 -2684 3531 3169 2154 128 3 0 chr2 199598098 199598396 -53658187 - AluSg SINE Alu -11 299 1 5735 236 59 53 chr2 199598396 199599895 -53656688 - L1MEc LINE L1 -3046 3169 1689 1732 287 101 39 chr2 199599934 199600941 -53655642 - L1MEc LINE L1 -5000 1205 136 1101 253 73 68 chr2 199600941 199601642 -53654941 + L2 LINE L2 2593 3308 -5 324 235 62 0 chr2 199601892 199601973 -53654610 + MIR SINE MIR 65 150 -112 841 263 227 5 chr2 199601989 199602399 -53654184 - MLT1J LTR MaLR -2 509 9 1981 92 11 11 chr2 199602468 199602771 -53653812 + AluY SINE Alu 1 303 0 1055 137 43 76 chr2 199603668 199603879 -53652704 + MER20 DNA MER1_type 16 219 0 2930 183 163 34 chr2 199603980 199604712 -53651871 - LTR1B LTR ERV1 0 826 1 1490 165 4 15 chr2 199605905 199606178 -53650405 + AluSx SINE Alu 21 290 -22 186 43 0 0 chr2 199606178 199606201 -53650382 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 321 245 47 57 chr2 199607420 199607526 -53649057 - MER91A DNA MER1_type -85 111 7 228 338 43 61 chr2 199608701 199608932 -53647651 - L2 LINE L2 -218 3054 2828 277 186 51 0 chr2 199608985 199609044 -53647539 - MLT1J LTR MaLR -31 480 419 326 272 0 89 chr2 199609138 199609296 -53647287 - MLT1J LTR MaLR -228 283 140 2170 109 6 16 chr2 199609910 199610223 -53646360 - AluSg SINE Alu 0 310 1 2257 79 21 0 chr2 199610229 199610519 -53646064 - AluSc SINE Alu -13 296 1 2415 78 3 3 chr2 199612112 199612419 -53644164 + AluY SINE Alu 1 307 -4 274 228 10 59 chr2 199612451 199612552 -53644031 - MIR SINE MIR 0 262 167 240 207 0 17 chr2 199612540 199612598 -53643985 + L2 LINE L2 1222 1278 -2036 * 573 242 25 6 chr2 199612732 199612889 -53643694 + MLT2E LTR ERVL 469 628 0 26 0 0 0 chr2 199613625 199613651 -53642932 + AT_rich Low_complexity Low_complexity 1 26 0 261 299 140 9 chr2 199613828 199613935 -53642648 - L2 LINE L2 -5 3267 3147 442 216 43 35 chr2 199613935 199614051 -53642532 + MER103 DNA DNA 39 155 -11 2149 121 0 3 chr2 199614819 199615116 -53641467 + AluSx SINE Alu 1 296 -16 2401 92 0 3 chr2 199615118 199615424 -53641159 + AluY SINE Alu 1 305 -6 21 0 0 0 chr2 199615483 199615504 -53641079 + AT_rich Low_complexity Low_complexity 1 21 0 261 163 0 0 chr2 199615645 199615694 -53640889 + CT-rich Low_complexity Low_complexity 2 50 0 2273 254 24 58 chr2 199615721 199616464 -53640119 - L1ME1 LINE L1 -7 6954 6237 745 174 9 0 chr2 199616466 199616581 -53640002 + FLAM_C SINE Alu 2 117 -26 328 153 14 14 chr2 199616590 199616662 -53639921 + (TA)n Simple_repeat Simple_repeat 1 72 0 3676 230 49 24 chr2 199616675 199617824 -53638759 - L1ME1 LINE L1 -746 6195 5061 1790 267 100 42 chr2 199617925 199618249 -53638334 - L1ME1 LINE L1 -4971 1452 1148 3911 172 110 17 chr2 199618249 199619005 -53637578 - LTR1B LTR ERV1 0 826 1 1790 267 100 42 chr2 199619005 199619351 -53637232 - L1ME1 LINE L1 -5275 1148 743 647 311 125 34 chr2 199619424 199619951 -53636632 - L1ME1 LINE L1 -5826 597 23 240 59 0 0 chr2 199620121 199620155 -53636428 + (A)n Simple_repeat Simple_repeat 1 34 0 383 282 122 0 chr2 199620358 199620489 -53636094 - LTR67 LTR ERVL -6 551 405 1918 136 45 0 chr2 199620865 199621151 -53635432 + AluSx SINE Alu 3 301 -11 357 314 50 16 chr2 199621222 199621343 -53635240 - L2 LINE L2 -14 3258 3134 818 164 34 20 chr2 199622650 199622796 -53633787 + AluJb SINE Alu 160 307 -5 2186 128 3 25 chr2 199622797 199623116 -53633467 + AluSx SINE Alu 1 312 0 2356 100 0 13 chr2 199623854 199624164 -53632419 + AluSq SINE Alu 1 306 -7 2111 128 3 0 chr2 199624803 199625093 -53631490 - AluSp SINE Alu -22 291 1 468 257 28 0 chr2 199625231 199625340 -53631243 + L2 LINE L2 3184 3295 -18 327 43 0 0 chr2 199625340 199625386 -53631197 + MADE1 DNA Mariner 1 46 -34 472 254 7 51 chr2 199625399 199625537 -53631046 - L2 LINE L2 0 3313 3182 2178 118 9 17 chr2 199626028 199626249 -53630334 + L1PA15 LINE L1 5823 6041 -124 2580 82 13 51 chr2 199626249 199626641 -53629942 + MER51B LTR ERV1 1 377 0 2178 118 9 17 chr2 199626641 199626765 -53629818 + L1PA15 LINE L1 6041 6165 0 28 29 0 0 chr2 199626825 199626860 -53629723 + AT_rich Low_complexity Low_complexity 1 35 0 203 256 0 0 chr2 199628512 199628555 -53628028 + L3 LINE CR1 1068 1110 -467 21 0 0 0 chr2 199628785 199628806 -53627777 + AT_rich Low_complexity Low_complexity 1 21 0 816 221 145 15 chr2 199629595 199629931 -53626652 + MER57A LTR ERV1 12 403 0 427 287 41 16 chr2 199630684 199630806 -53625777 + MIR3 SINE MIR 30 154 -54 1933 164 18 6 chr2 199632420 199632750 -53623833 - MER1B DNA MER1_type 0 337 4 253 243 260 34 chr2 199634229 199634406 -53622177 + L1MC4a LINE L1 5730 5946 -1862 329 250 0 0 chr2 199635739 199635807 -53620776 + L2 LINE L2 3243 3310 -3 1405 251 106 15 chr2 199636790 199637770 -53618813 + L1ME3A LINE L1 4996 6087 -83 22 35 0 0 chr2 199637793 199637822 -53618761 + AT_rich Low_complexity Low_complexity 1 29 0 210 184 53 0 chr2 199639706 199639744 -53616839 - MER5A DNA MER1_type -2 187 148 405 60 0 0 chr2 199639745 199639795 -53616788 - Alu SINE Alu -18 294 245 239 318 5 5 chr2 199639796 199639885 -53616698 - MER5B DNA MER1_type -36 153 54 2091 136 0 13 chr2 199639926 199640242 -53616341 + AluSx SINE Alu 1 312 0 769 216 7 7 chr2 199640637 199640790 -53615793 - Tigger3(Golem) DNA MER2_type -2876 153 1 2222 86 17 0 chr2 199640941 199641243 -53615340 + AluSp SINE Alu 1 307 -6 502 243 162 35 chr2 199642862 199642899 -53613684 + L2 LINE L2 3020 3051 -262 2298 68 7 10 chr2 199642899 199643193 -53613390 - AluSg SINE Alu -17 293 1 502 243 162 35 chr2 199643193 199643414 -53613169 + L2 LINE L2 3051 3311 -2 323 185 12 37 chr2 199643834 199643915 -53612668 + MER5A DNA MER1_type 30 108 -81 595 198 64 29 chr2 199644063 199644112 -53612471 - MER5B DNA MER1_type 0 178 132 195 69 0 0 chr2 199644112 199644141 -53612442 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 595 198 64 29 chr2 199644141 199644263 -53612320 - MER5B DNA MER1_type -46 132 1 577 211 50 61 chr2 199644421 199644601 -53611982 - MIR SINE MIR -14 248 71 1603 96 170 0 chr2 199646259 199646530 -53610053 + MER47A DNA MER2_type 1 317 -49 21 0 0 0 chr2 199648132 199648153 -53608430 + AT_rich Low_complexity Low_complexity 1 21 0 685 206 82 45 chr2 199648407 199648650 -53607933 + MER112 DNA MER1_type 5 256 0 378 170 19 66 chr2 199650390 199650496 -53606087 - MER3 DNA MER1_type 0 209 109 26 30 0 0 chr2 199651350 199651383 -53605200 + AT_rich Low_complexity Low_complexity 1 33 0 279 268 32 109 chr2 199652009 199652229 -53604354 + MER102a DNA MER1_type 112 314 -16 3391 123 90 13 chr2 199652313 199653100 -53603483 + Tigger1 DNA MER2_type 1 923 -1495 22 56 0 0 chr2 199653813 199653849 -53602734 + AT_rich Low_complexity Low_complexity 1 36 0 198 0 0 0 chr2 199654015 199654037 -53602546 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 1058 193 19 5 chr2 199655576 199655789 -53600794 - MER58B DNA MER1_type 0 341 126 9524 108 22 10 chr2 199656339 199657854 -53598729 + Tigger1 DNA MER2_type 885 2418 0 195 24 119 0 chr2 199660310 199660352 -53596231 + A-rich Low_complexity Low_complexity 1 47 0 276 30 0 0 chr2 199660364 199660397 -53596186 + (A)n Simple_repeat Simple_repeat 1 33 0 437 254 8 25 chr2 199660400 199660522 -53596061 - MER58B DNA MER1_type -221 120 1 215 308 0 0 chr2 199661362 199661414 -53595169 + L2 LINE L2 3216 3267 -5 262 275 37 55 chr2 199661581 199661690 -53594893 - L2 LINE L2 -6 3307 3201 400 209 77 11 chr2 199662193 199662284 -53594299 + MIR3 SINE MIR 85 181 -27 453 266 104 37 chr2 199662787 199663028 -53593555 + L2 LINE L2 2986 3242 -71 636 230 128 31 chr2 199664056 199664252 -53592331 + MIR SINE MIR 40 254 -8 1156 220 33 48 chr2 199667465 199667801 -53588782 + L1ME3 LINE L1 5830 6160 -2 762 265 134 20 chr2 199667839 199668235 -53588348 + MLT1J LTR MaLR 70 510 -1 467 259 239 19 chr2 199668380 199668639 -53587944 + L1M4 LINE L1 4781 5096 -1050 635 221 7 13 chr2 199668660 199668814 -53587769 + L1ME3 LINE L1 6007 6159 -3 2141 121 24 0 chr2 199669242 199669540 -53587043 - AluSx SINE Alu -7 305 1 252 0 0 0 chr2 199673709 199673737 -53582846 + (TA)n Simple_repeat Simple_repeat 1 28 0 22 0 0 0 chr2 199675080 199675102 -53581481 + AT_rich Low_complexity Low_complexity 1 22 0 299 286 29 38 chr2 199675123 199675228 -53581355 + MIR SINE MIR 159 262 0 629 207 143 60 chr2 199675287 199675538 -53581045 - L1ME1 LINE L1 -18 6148 5877 381 285 51 36 chr2 199676252 199676389 -53580194 + L2 LINE L2 3133 3271 -1 1445 129 16 0 chr2 199678273 199678521 -53578062 + HERVH LTR ERV1 7462 7713 0 760 173 87 68 chr2 199678521 199678885 -53577698 + LTR7 LTR ERV1 1 412 -38 2379 82 0 0 chr2 199681211 199681502 -53575081 - AluSg SINE Alu -14 296 6 254 106 21 0 chr2 199681958 199682005 -53574578 + (CA)n Simple_repeat Simple_repeat 1 48 0 394 312 14 28 chr2 199682491 199682632 -53573951 - MIR3 SINE MIR -37 171 33 468 294 119 22 chr2 199683159 199683428 -53573155 + L1ME4a LINE L1 5654 5948 -173 2033 140 0 16 chr2 199683499 199683807 -53572776 - AluSx SINE Alu -9 303 1 227 182 68 0 chr2 199684613 199684657 -53571926 + MIR SINE MIR 205 251 -11 1873 157 0 10 chr2 199686593 199686893 -53569690 + AluSx SINE Alu 1 297 -15 2228 114 0 0 chr2 199686999 199687298 -53569285 + AluSx SINE Alu 1 299 -13 376 287 44 22 chr2 199687314 199687450 -53569133 - MIR SINE MIR 0 262 124 224 274 16 0 chr2 199687587 199687649 -53568934 + (TA)n Simple_repeat Simple_repeat 2 64 0 4063 107 161 30 chr2 199687714 199688151 -53568432 - Tigger3b DNA MER2_type -1798 1230 852 1698 167 3 10 chr2 199688151 199688450 -53568133 - AluJb SINE Alu -15 297 1 4063 107 161 30 chr2 199688450 199688851 -53567732 - Tigger3b DNA MER2_type -2176 852 282 2162 103 4 0 chr2 199688851 199689166 -53567417 + AluSx SINE Alu 1 316 0 475 259 21 0 chr2 199689166 199689309 -53567274 + MER115 DNA AcHobo 548 693 0 305 56 14 56 chr2 199689547 199689619 -53566964 + (TTTTG)n Simple_repeat Simple_repeat 2 70 0 1590 175 21 7 chr2 199690016 199690301 -53566282 + AluJb SINE Alu 10 298 -14 213 39 0 0 chr2 199691139 199691165 -53565418 + (T)n Simple_repeat Simple_repeat 1 26 0 237 132 0 0 chr2 199691343 199691381 -53565202 + (A)n Simple_repeat Simple_repeat 1 38 0 280 317 47 2 chr2 199692255 199692367 -53564216 - MIR SINE MIR -59 149 62 22 35 0 0 chr2 199692468 199692497 -53564086 + AT_rich Low_complexity Low_complexity 1 29 0 496 241 120 42 chr2 199693396 199693587 -53562996 - L2 LINE L2 -2 3311 3106 655 153 25 8 chr2 199694176 199694294 -53562289 - MER119 DNA MER1_type 0 583 464 433 268 63 8 chr2 199694304 199694431 -53562152 - MER119 DNA MER1_type -449 134 1 385 307 91 0 chr2 199694461 199694637 -53561946 + LTR16A LTR ERVL 259 450 0 323 312 93 33 chr2 199695712 199696119 -53560464 + L2 LINE L2 2782 3222 -50 198 0 0 0 chr2 199697737 199697759 -53558824 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 2359 99 0 0 chr2 199697782 199698075 -53558508 + AluSx SINE Alu 1 293 -19 398 68 0 17 chr2 199698514 199698573 -53558010 + (TC)n Simple_repeat Simple_repeat 1 58 0 804 260 57 36 chr2 199698651 199699050 -53557533 + MLT1J1 LTR MaLR 69 446 0 363 257 139 0 chr2 199699091 199699192 -53557391 - L2 LINE L2 -2 3270 3156 2590 111 58 24 chr2 199699419 199699833 -53556750 + MSTA LTR MaLR 1 428 0 423 279 86 0 chr2 199700141 199700281 -53556302 - MER69A DNA AcHobo -20 157 6 2315 94 3 3 chr2 199700717 199701024 -53555559 + AluSg1 SINE Alu 1 307 -2 1378 240 21 5 chr2 199701864 199702225 -53554358 + L1M4 LINE L1 4967 5327 -819 1959 81 21 11 chr2 199702225 199702508 -53554075 - AluSg SINE Alu -22 288 3 1378 240 21 5 chr2 199702508 199702557 -53554026 + L1M4 LINE L1 5327 5374 -772 3453 166 85 22 chr2 199702724 199702896 -53553687 + L1MB7 LINE L1 5324 5484 -700 2285 112 0 0 chr2 199702896 199703199 -53553384 + AluSq SINE Alu 1 303 -10 3453 166 85 22 chr2 199703199 199703835 -53552748 + L1MB7 LINE L1 5484 6183 -1 422 294 19 12 chr2 199704077 199704237 -53552346 - L2 LINE L2 0 3313 3153 270 221 29 0 chr2 199704393 199704461 -53552122 + MIR SINE MIR 183 252 -10 1785 126 14 3 chr2 199704793 199705078 -53551505 - L1PB1 LINE L1 -4 6147 5860 2260 103 3 3 chr2 199705080 199705382 -53551201 + AluSx SINE Alu 1 302 -10 547 243 37 69 chr2 199706026 199706103 -53550480 + MIR SINE MIR 78 156 -106 2380 90 3 0 chr2 199706103 199706402 -53550181 + AluSq SINE Alu 1 300 -13 547 243 37 69 chr2 199706402 199706513 -53550070 + MIR SINE MIR 156 260 -2 2002 155 0 13 chr2 199706523 199706827 -53549756 + AluJo SINE Alu 12 311 -1 1819 153 4 4 chr2 199707031 199707352 -53549231 - AluSx SINE Alu 0 321 1 387 0 0 0 chr2 199707435 199707478 -53549105 + (TGGA)n Simple_repeat Simple_repeat 2 44 0 427 322 0 9 chr2 199707565 199707680 -53548903 - L2 LINE L2 0 3313 3200 222 360 37 25 chr2 199707940 199708101 -53548482 - L3 LINE CR1 -7 1570 1408 378 184 0 0 chr2 199708405 199708481 -53548102 + (TG)n Simple_repeat Simple_repeat 2 77 0 196 298 0 135 chr2 199710229 199710268 -53546315 - L2 LINE L2 0 3272 3229 2384 80 7 0 chr2 199710268 199710568 -53546015 - AluSp SINE Alu -11 302 1 196 298 0 135 chr2 199710568 199710632 -53545951 - L2 LINE L2 -43 3229 3183 951 285 186 38 chr2 199710663 199711239 -53545344 - L2 LINE L2 -387 2927 2267 2325 94 7 0 chr2 199711239 199711548 -53545035 + AluSp SINE Alu 1 311 -2 189 0 0 0 chr2 199712238 199712259 -53544324 + (TTTC)n Simple_repeat Simple_repeat 2 22 0 243 0 0 0 chr2 199712556 199712583 -53544000 + (CA)n Simple_repeat Simple_repeat 2 28 0 523 227 21 43 chr2 199713366 199713507 -53543076 + L2 LINE L2 3164 3301 -12 23 0 0 0 chr2 199713629 199713652 -53542931 + AT_rich Low_complexity Low_complexity 1 23 0 2236 123 0 0 chr2 199713737 199714046 -53542537 - AluSx SINE Alu -3 309 1 284 273 0 13 chr2 199715329 199715406 -53541177 - MIR SINE MIR -10 252 177 36 40 0 0 chr2 199715419 199715469 -53541114 + AT_rich Low_complexity Low_complexity 1 50 0 569 276 15 0 chr2 199715501 199715635 -53540948 - MIR SINE MIR -126 136 1 203 194 236 0 chr2 199715653 199715725 -53540858 - MIR SINE MIR -74 188 100 294 202 73 73 chr2 199716074 199716183 -53540400 + MER5A DNA MER1_type 57 165 -24 281 302 26 26 chr2 199716079 199716195 -53540388 - MER5A DNA MER1_type -50 139 24 * 296 95 0 48 chr2 199716319 199716382 -53540201 + (T)n Simple_repeat Simple_repeat 1 60 0 2100 79 15 0 chr2 199716489 199716755 -53539828 - AluSg SINE Alu 0 310 41 227 238 133 59 chr2 199718176 199718462 -53538121 - L1ME4a LINE L1 -34 6087 5781 1808 117 34 0 chr2 199718511 199718777 -53537806 - AluSq SINE Alu -37 276 2 180 0 0 0 chr2 199718828 199718848 -53537735 + (T)n Simple_repeat Simple_repeat 1 20 0 1581 179 3 64 chr2 199718870 199719200 -53537383 - AluJo SINE Alu -2 310 1 2245 93 0 32 chr2 199719598 199719911 -53536672 + AluSx SINE Alu 1 303 -9 2415 60 0 16 chr2 199720187 199720502 -53536081 + AluY SINE Alu 1 310 -1 673 100 0 0 chr2 199720562 199720662 -53535921 + L1MA3 LINE L1 6198 6297 -8 247 211 0 18 chr2 199721646 199721703 -53534880 + CT-rich Low_complexity Low_complexity 1 56 0 211 194 0 0 chr2 199721895 199721931 -53534652 + (CA)n Simple_repeat Simple_repeat 1 36 0 209 83 28 0 chr2 199722176 199722212 -53534371 + (TTTTC)n Simple_repeat Simple_repeat 3 39 0 5602 138 29 44 chr2 199722389 199723477 -53533106 - MER11C LTR ERVK 0 1071 1 556 311 78 56 chr2 199723491 199724083 -53532500 + MLT1L LTR MaLR 1 605 -10 2413 99 0 6 chr2 199724187 199724501 -53532082 - AluSx SINE Alu 0 312 1 441 227 0 108 chr2 199725113 199725298 -53531285 + L2 LINE L2 3099 3263 -50 221 290 0 16 chr2 199726314 199726376 -53530207 - MIR SINE MIR -59 149 89 221 229 21 0 chr2 199726393 199726441 -53530142 - L2 LINE L2 0 3313 3265 369 201 43 92 chr2 199726653 199726817 -53529766 - L1MC5 LINE L1 -60 7901 7746 203 141 28 28 chr2 199728029 199728100 -53528483 + (TA)n Simple_repeat Simple_repeat 1 71 0 695 159 9 0 chr2 199728779 199728886 -53527697 + FLAM_C SINE Alu 4 111 -32 342 0 0 0 chr2 199728892 199728930 -53527653 + (CAA)n Simple_repeat Simple_repeat 1 38 0 301 293 264 6 chr2 199729443 199729610 -53526973 - MIR SINE MIR -18 244 35 291 196 108 10 chr2 199731377 199731479 -53525104 - MIR SINE MIR -34 228 117 186 43 0 0 chr2 199733324 199733347 -53523236 + (A)n Simple_repeat Simple_repeat 1 23 0 821 199 134 38 chr2 199734291 199734583 -53522000 - MLT1H LTR MaLR 0 549 230 460 260 118 18 chr2 199734790 199734959 -53521624 + MLT1H1 LTR MaLR 13 198 -357 472 238 48 54 chr2 199735345 199735382 -53521201 - L2 LINE L2 0 3313 3277 2159 110 0 0 chr2 199735382 199735705 -53520878 - AluSg SINE Alu 0 323 1 472 238 48 54 chr2 199735705 199735813 -53520770 - L2 LINE L2 -36 3277 3168 675 232 18 6 chr2 199735823 199735987 -53520596 - MIR SINE MIR -3 259 94 205 227 121 30 chr2 199736099 199736165 -53520418 - L2 LINE L2 -18 3254 3183 1745 157 18 7 chr2 199737772 199738075 -53518508 - AluSx SINE Alu 0 306 1 1696 168 0 36 chr2 199838127 199838204 -53418379 + ERVL LTR ERVL 4576 4654 -1110 2129 127 3 0 chr2 199838204 199838495 -53418088 + AluSx SINE Alu 17 308 -4 1696 168 0 36 chr2 199838495 199838720 -53417863 + ERVL LTR ERVL 4654 4867 -897 1984 146 3 10 chr2 199839017 199839326 -53417257 - AluSx SINE Alu -5 307 1 315 0 0 0 chr2 199840467 199840502 -53416081 + (CA)n Simple_repeat Simple_repeat 2 36 0 21 0 0 0 chr2 199840767 199840788 -53415795 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr2 199841259 199841279 -53415304 + (TG)n Simple_repeat Simple_repeat 1 20 0 646 264 70 15 chr2 199841319 199841539 -53415044 + MIR SINE MIR 12 229 -33 2323 93 0 0 chr2 199841825 199842125 -53414458 + AluY SINE Alu 1 300 -11 27 29 0 0 chr2 199842541 199842575 -53414008 + AT_rich Low_complexity Low_complexity 1 34 0 254 326 21 0 chr2 199846897 199846992 -53409591 + MIR SINE MIR 88 184 -78 337 339 0 58 chr2 199847373 199847544 -53409039 - MER5A DNA MER1_type -13 176 16 2448 100 0 0 chr2 199847598 199847908 -53408675 + AluSx SINE Alu 1 310 -2 359 244 9 0 chr2 199848408 199848523 -53408060 + GA-rich Low_complexity Low_complexity 1 116 0 2012 162 25 14 chr2 199848766 199849124 -53407459 + MLT1A1 LTR MaLR 1 362 -3 1508 173 4 19 chr2 199849165 199849436 -53407147 - AluJo SINE Alu -28 284 18 23 0 0 0 chr2 199850522 199850545 -53406038 + AT_rich Low_complexity Low_complexity 1 23 0 414 0 0 0 chr2 199851162 199851208 -53405375 + (TA)n Simple_repeat Simple_repeat 1 46 0 874 177 0 0 chr2 199851783 199851930 -53404653 + MER3 DNA MER1_type 62 208 -1 261 250 0 0 chr2 199851888 199851944 -53404639 - MER3 DNA MER1_type -119 90 35 * 318 139 35 0 chr2 199854517 199854603 -53401980 + (TA)n Simple_repeat Simple_repeat 2 90 0 1977 113 0 53 chr2 199854603 199854905 -53401678 - AluSx SINE Alu -26 286 1 700 263 6 0 chr2 199855181 199855337 -53401246 - MER5A DNA MER1_type -1 188 32 1260 286 77 123 chr2 199856564 199857709 -53398874 + L3 LINE CR1 463 1554 -23 276 344 33 25 chr2 199857710 199857832 -53398751 - L2 LINE L2 -5 3308 3186 2299 119 0 0 chr2 199857957 199858269 -53398314 + AluSx SINE Alu 1 312 0 458 279 28 50 chr2 199859764 199859943 -53396640 + Charlie8 DNA MER1_type 78 252 -2165 28 0 0 0 chr2 199860237 199860265 -53396318 + AT_rich Low_complexity Low_complexity 1 28 0 485 310 132 14 chr2 199862451 199862664 -53393919 + MIR SINE MIR 15 252 -10 195 42 0 0 chr2 199863437 199863461 -53393122 + (TG)n Simple_repeat Simple_repeat 2 25 0 790 49 0 0 chr2 199864125 199864227 -53392356 - L1PA4 LINE L1 0 6155 6054 21 0 0 0 chr2 199864827 199864848 -53391735 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 199866029 199866053 -53390530 + AT_rich Low_complexity Low_complexity 1 24 0 242 282 18 64 chr2 199866821 199866847 -53389736 - MER5B DNA MER1_type -73 105 79 2219 135 27 14 chr2 199866847 199867217 -53389366 + THE1C LTR MaLR 1 375 0 242 282 18 64 chr2 199867217 199867300 -53389283 - MER5B DNA MER1_type -99 79 1 22 0 0 0 chr2 199867694 199867716 -53388867 + AT_rich Low_complexity Low_complexity 1 22 0 425 191 9 0 chr2 199867856 199867961 -53388622 + GA-rich Low_complexity Low_complexity 4 109 0 225 337 99 0 chr2 199867983 199868084 -53388499 + L2 LINE L2 3197 3307 -6 195 272 0 0 chr2 199869695 199869787 -53386796 + (TA)n Simple_repeat Simple_repeat 1 92 0 403 322 96 21 chr2 199870078 199870317 -53386266 + MIR SINE MIR 6 262 0 685 373 27 17 chr2 199870945 199871419 -53385164 + LTR16B LTR ERVL 1 452 -12 2304 123 13 19 chr2 199872148 199872523 -53384060 + THE1C LTR MaLR 1 373 -2 16666 101 16 19 chr2 199872751 199875346 -53381237 + HERVH LTR ERV1 460 2987 -4726 908 135 20 0 chr2 199875340 199875488 -53381095 + HERVH LTR ERV1 3140 3290 -4423 * 3465 99 4 6 chr2 199875478 199875983 -53380600 + HERVH LTR ERV1 3492 3995 -3718 2872 138 0 23 chr2 199875983 199876614 -53379969 + HERVH LTR ERV1 4488 5149 -2564 1394 119 18 9 chr2 199876615 199876833 -53379750 + HERVH LTR ERV1 5600 5819 -1894 * 2511 91 45 0 chr2 199876831 199877206 -53379377 + HERVH LTR ERV1 7322 7713 0 2588 88 58 21 chr2 199877206 199877638 -53378945 + LTR7 LTR ERV1 1 448 -2 297 298 12 12 chr2 199878161 199878245 -53378338 + CT-rich Low_complexity Low_complexity 5 88 0 282 216 97 40 chr2 199879596 199879665 -53376918 - L1ME LINE L1 -287 5834 5770 2401 67 3 0 chr2 199879665 199879964 -53376619 - AluY SINE Alu -11 300 1 282 216 97 40 chr2 199879964 199880070 -53376513 - L1ME LINE L1 -351 5770 5649 307 312 6 45 chr2 199880129 199880286 -53376297 - MER117 DNA MER1_type -42 155 5 322 279 180 12 chr2 199881893 199882054 -53374529 - MIR SINE MIR -70 192 5 325 271 51 25 chr2 199883061 199883179 -53373404 + MIR SINE MIR 4 124 -138 189 274 16 32 chr2 199883817 199883879 -53372704 + MIR SINE MIR 80 140 -122 36 62 0 0 chr2 199884876 199884940 -53371643 + AT_rich Low_complexity Low_complexity 1 64 0 25 0 0 0 chr2 199887039 199887064 -53369519 + AT_rich Low_complexity Low_complexity 1 25 0 562 221 144 0 chr2 199887221 199887379 -53369204 - MER5A DNA MER1_type 0 189 6 655 301 37 4 chr2 199887392 199887638 -53368945 - MER112 DNA MER1_type -2 254 1 1837 188 69 78 chr2 199888252 199888286 -53368297 - L1ME2 LINE L1 -6 6158 6125 998 219 100 31 chr2 199888286 199888605 -53367978 - MER2 DNA MER2_type -1 343 3 1837 188 69 78 chr2 199888605 199888628 -53367955 - L1ME2 LINE L1 -39 6125 6103 2351 158 16 41 chr2 199888628 199889065 -53367518 + MSTB LTR MaLR 1 426 0 1837 188 69 78 chr2 199889065 199889558 -53367025 - L1ME2 LINE L1 -61 6103 5612 312 213 27 0 chr2 199889595 199889670 -53366913 - L1ME2 LINE L1 -861 5285 5209 * 1009 230 96 34 chr2 199889641 199890047 -53366536 - L1MEc LINE L1 -2279 3936 3512 * 2232 257 76 35 chr2 199890037 199891401 -53365182 - L1MEc LINE L1 -2982 3233 1860 554 302 69 31 chr2 199891689 199891980 -53364603 + MLT1I LTR MaLR 106 407 -2 22 35 0 0 chr2 199892828 199892857 -53363726 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr2 199893337 199893366 -53363217 + AT_rich Low_complexity Low_complexity 1 29 0 219 114 0 0 chr2 199893725 199893760 -53362823 + (GGAA)n Simple_repeat Simple_repeat 4 38 0 731 302 93 32 chr2 199893997 199894490 -53362093 - L2 LINE L2 -1442 1872 1350 256 325 115 26 chr2 199896821 199897012 -53359571 + L2 LINE L2 2689 2896 -418 244 337 0 0 chr2 199897049 199897141 -53359442 - L2 LINE L2 -2418 896 805 279 313 9 26 chr2 199897255 199897370 -53359213 + MLT1I LTR MaLR 49 161 -248 224 326 31 10 chr2 199897461 199897559 -53359024 - L2 LINE L2 -733 2581 2482 351 224 25 134 chr2 199897562 199897763 -53358820 + MLT1I LTR MaLR 223 401 -8 1848 164 36 0 chr2 199897934 199898263 -53358320 + MER2 DNA MER2_type 3 343 -1 561 297 47 38 chr2 199899486 199899698 -53356885 + MIR SINE MIR 37 250 -12 2266 200 52 2 chr2 199902351 199902832 -53353751 + MLT1D LTR MaLR 1 505 0 189 263 162 10 chr2 199902988 199903087 -53353496 - L2 LINE L2 -93 3220 3107 314 233 0 33 chr2 199903630 199903720 -53352863 + A-rich Low_complexity Low_complexity 3 89 0 201 39 0 0 chr2 199904305 199904331 -53352252 + (TG)n Simple_repeat Simple_repeat 2 27 0 322 152 91 30 chr2 199905063 199905129 -53351454 - AluSg/x SINE Alu -119 183 114 694 124 0 9 chr2 199905163 199905268 -53351315 + FLAM_C SINE Alu 13 116 -27 25 0 0 0 chr2 199905286 199905311 -53351272 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr2 199906326 199906351 -53350232 + AT_rich Low_complexity Low_complexity 1 25 0 2283 105 3 0 chr2 199906429 199906783 -53349800 - AluSq SINE Alu 0 355 1 22 0 0 0 chr2 199907538 199907560 -53349023 + AT_rich Low_complexity Low_complexity 1 22 0 300 192 27 0 chr2 199911188 199911261 -53345322 + HsTC2 DNA Tc2 3 77 -1821 207 0 0 0 chr2 199913957 199913980 -53342603 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 211 200 15 62 chr2 199914061 199914126 -53342457 + MIR SINE MIR 88 149 -113 3167 92 17 7 chr2 199914774 199915233 -53341350 - L1PA11 LINE L1 -1 6173 5710 25 75 0 0 chr2 199915409 199915462 -53341121 + AT_rich Low_complexity Low_complexity 1 53 0 1357 170 19 0 chr2 199918631 199918902 -53337681 - L1MA5 LINE L1 -5 6295 6020 290 290 11 0 chr2 199919155 199919248 -53337335 + MER5A DNA MER1_type 13 106 -83 230 342 119 81 chr2 199919334 199919692 -53336891 + L2 LINE L2 2824 3202 -70 215 31 31 0 chr2 199919692 199919724 -53336859 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 230 342 119 81 chr2 199919724 199919786 -53336797 + L2 LINE L2 3202 3260 -12 2301 89 3 0 chr2 199919788 199920080 -53336503 + AluSg SINE Alu 1 293 -17 1673 161 52 7 chr2 199920183 199920493 -53336090 - LTR51 LTR ERV1 0 671 348 778 171 13 40 chr2 199920594 199920746 -53335837 - LTR51 LTR ERV1 -523 148 1 3793 197 60 14 chr2 199920830 199921694 -53334889 + Cheshire DNA MER1_type 1516 2419 -1 1924 104 90 55 chr2 199922707 199923232 -53333351 - MER51A LTR ERV1 0 634 1 4284 193 56 71 chr2 199924276 199926372 -53330211 - L1MA9 LINE L1 -170 6142 4075 33 0 0 0 chr2 199926385 199926418 -53330165 + AT_rich Low_complexity Low_complexity 1 33 0 396 0 0 0 chr2 199926646 199926690 -53329893 + (CA)n Simple_repeat Simple_repeat 1 44 0 403 294 215 9 chr2 199926774 199926988 -53329595 + MIR SINE MIR 5 262 0 1902 162 36 25 chr2 199927721 199928079 -53328504 - THE1B LTR MaLR -2 362 1 11154 107 9 0 chr2 199928079 199929645 -53326938 - THE1B-int LTR MaLR 0 1580 1 1998 125 58 45 chr2 199929645 199930004 -53326579 - THE1B LTR MaLR 0 364 1 807 305 70 86 chr2 199930306 199931178 -53325405 + L2 LINE L2 1698 2555 -759 2972 196 65 3 chr2 199931555 199932174 -53324409 - L1MB4 LINE L1 -3 6177 5521 21 71 0 0 chr2 199932349 199932391 -53324192 + AT_rich Low_complexity Low_complexity 1 42 0 180 77 0 0 chr2 199932496 199932522 -53324061 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 202 294 84 56 chr2 199933979 199934122 -53322461 + L2 LINE L2 3167 3313 0 383 315 76 15 chr2 199934518 199934848 -53321735 - L1ME4a LINE L1 -255 5866 5517 647 323 22 13 chr2 199935133 199935362 -53321221 + MIR SINE MIR 32 262 0 1207 281 113 38 chr2 199936326 199936874 -53319709 + L2 LINE L2 2361 2949 -365 963 132 0 0 chr2 199937801 199937937 -53318646 + AluSq/x SINE Alu 1 136 -176 549 125 0 0 chr2 199937967 199938055 -53318528 + AluS SINE Alu 225 312 0 436 293 143 39 chr2 199938068 199938365 -53318218 - L2 LINE L2 -275 3038 2713 444 229 84 15 chr2 199938627 199938758 -53317825 - MIR SINE MIR -11 251 112 40 59 0 0 chr2 199940270 199940338 -53316245 + AT_rich Low_complexity Low_complexity 1 68 0 379 252 26 17 chr2 199943268 199943383 -53313200 - L2 LINE L2 -4 3309 3194 825 261 58 18 chr2 199943454 199943699 -53312884 - MIR SINE MIR 0 262 14 266 322 22 0 chr2 199944044 199944134 -53312449 - MIR3 SINE MIR -32 176 85 390 312 59 24 chr2 199944452 199944622 -53311961 + MIR SINE MIR 30 205 -57 22 0 0 0 chr2 199944784 199944806 -53311777 + AT_rich Low_complexity Low_complexity 1 22 0 193 375 57 34 chr2 199945016 199945192 -53311391 + L2 LINE L2 2828 3007 -265 351 153 35 59 chr2 199947816 199947901 -53308682 - MER69 DNA AcHobo -1 2525 2443 1826 121 60 0 chr2 199948373 199948655 -53307928 - AluSx SINE Alu -13 299 1 22 0 0 0 chr2 199950704 199950726 -53305857 + AT_rich Low_complexity Low_complexity 1 22 0 784 316 164 26 chr2 199951155 199951652 -53304931 + L2 LINE L2 2544 3165 -148 2367 88 0 0 chr2 199951652 199951948 -53304635 + AluSc SINE Alu 1 296 -13 784 316 164 26 chr2 199951948 199952083 -53304500 + L2 LINE L2 3165 3280 -33 279 0 0 0 chr2 199952183 199952214 -53304369 + (TG)n Simple_repeat Simple_repeat 2 32 0 495 286 127 32 chr2 199952434 199952654 -53303929 + MIR SINE MIR 11 251 -11 326 376 44 39 chr2 199955187 199955570 -53301013 - L2 LINE L2 -436 2878 2494 21 0 0 0 chr2 199955818 199955839 -53300744 + AT_rich Low_complexity Low_complexity 1 21 0 834 295 73 35 chr2 199957139 199957712 -53298871 + L2 LINE L2 2624 3246 -67 839 297 52 30 chr2 199957762 199958126 -53298457 + LTR16A LTR ERVL 59 430 -20 316 211 31 180 chr2 199958143 199958304 -53298279 - MIR SINE MIR -124 138 2 1526 178 3 7 chr2 199958782 199959080 -53297503 + L1MA4 LINE L1 6003 6299 -1 21 57 0 0 chr2 199961698 199961733 -53294850 + AT_rich Low_complexity Low_complexity 1 35 0 23 54 0 0 chr2 199963089 199963126 -53293457 + AT_rich Low_complexity Low_complexity 1 37 0 210 71 0 0 chr2 199964281 199964309 -53292274 + (CAAA)n Simple_repeat Simple_repeat 4 31 0 322 293 70 25 chr2 199966351 199966508 -53290075 + MIR SINE MIR 73 236 -26 243 296 65 37 chr2 199972084 199972192 -53284391 - MIR SINE MIR -118 144 34 270 316 13 0 chr2 199972481 199972557 -53284026 + L2 LINE L2 3180 3256 -16 1078 251 140 29 chr2 199972765 199973144 -53283439 + MLT1G1 LTR MaLR 158 578 -17 240 184 0 0 chr2 199973313 199973362 -53283221 + CT-rich Low_complexity Low_complexity 1 49 0 570 29 0 0 chr2 199973368 199973436 -53283147 + (TCTA)n Simple_repeat Simple_repeat 1 68 0 205 274 88 29 chr2 199973436 199973463 -53283120 + MIR SINE MIR 113 137 -125 912 59 0 0 chr2 199973463 199973581 -53283002 + L1PA14 LINE L1 6042 6159 -2 205 274 88 29 chr2 199973581 199973655 -53282928 + MIR SINE MIR 137 220 -42 1726 160 0 19 chr2 199973804 199974111 -53282472 + AluSx SINE Alu 1 301 -11 23 0 0 0 chr2 199976833 199976856 -53279727 + AT_rich Low_complexity Low_complexity 1 23 0 551 71 12 0 chr2 199978269 199978354 -53278229 + (GA)n Simple_repeat Simple_repeat 1 86 0 300 240 161 101 chr2 199978941 199979208 -53277375 - L1M2 LINE L1 -6043 806 524 482 297 46 54 chr2 199982742 199982981 -53273602 - MIR SINE MIR -24 238 2 314 268 65 32 chr2 199983111 199983234 -53273349 - MER5B DNA MER1_type 0 178 52 382 193 0 60 chr2 199983453 199983536 -53273047 + MIR SINE MIR 111 188 -74 200 227 0 0 chr2 199983580 199983624 -53272959 + (TAAA)n Simple_repeat Simple_repeat 1 44 0 340 296 81 47 chr2 199984182 199984354 -53272229 + MER5B DNA MER1_type 1 178 0 339 186 7 200 chr2 199985135 199985280 -53271303 - MER103 DNA DNA -46 120 4 563 157 0 37 chr2 199985882 199985990 -53270593 - AluJo SINE Alu -3 309 206 866 203 0 0 chr2 199985990 199986143 -53270440 - AluJo SINE Alu -159 153 1 864 67 46 14 chr2 199986823 199987049 -53269534 + (TCTA)n Simple_repeat Simple_repeat 1 233 0 937 210 33 5 chr2 199987050 199987264 -53269319 + Tigger1 DNA MER2_type 3 222 -2196 * 4495 106 82 11 chr2 199987249 199987960 -53268623 + Tigger1 DNA MER2_type 1658 2418 0 285 188 35 0 chr2 199987981 199988066 -53268517 + (TA)n Simple_repeat Simple_repeat 2 89 0 225 219 41 14 chr2 199988234 199988307 -53268276 + (TA)n Simple_repeat Simple_repeat 2 76 0 229 233 82 14 chr2 199988327 199988400 -53268183 - L1MC/D LINE L1 -1899 5909 5832 27 29 0 0 chr2 199988449 199988483 -53268100 + AT_rich Low_complexity Low_complexity 1 34 0 439 132 13 0 chr2 199989018 199989094 -53267489 + L1PA13 LINE L1 6073 6149 -14 207 294 112 63 chr2 199989232 199989375 -53267208 + MIR3 SINE MIR 23 172 -36 25 0 0 0 chr2 199990721 199990746 -53265837 + AT_rich Low_complexity Low_complexity 1 25 0 31 44 0 0 chr2 199991090 199991135 -53265448 + AT_rich Low_complexity Low_complexity 1 45 0 24 0 0 0 chr2 199991532 199991556 -53265027 + AT_rich Low_complexity Low_complexity 1 24 0 2550 50 0 0 chr2 199991770 199992073 -53264510 - AluY SINE Alu -8 303 1 301 250 83 0 chr2 199992855 199992939 -53263644 - L2 LINE L2 0 3272 3182 225 311 172 10 chr2 199993213 199993422 -53263161 - L2 LINE L2 -1207 2107 1865 284 258 237 0 chr2 199993487 199993584 -53262999 + L2 LINE L2 3194 3313 0 429 248 78 87 chr2 199993587 199993817 -53262766 - L2 LINE L2 -472 2842 2615 433 283 117 0 chr2 199994145 199994265 -53262318 - L2 LINE L2 -2 3270 3137 240 299 45 0 chr2 199995275 199995342 -53261241 - MIR3 SINE MIR -44 164 95 1866 179 40 6 chr2 199995590 199995943 -53260640 - MLT1A1 LTR MaLR 0 365 1 1709 205 38 9 chr2 199996006 199996347 -53260236 - MLT1A1 LTR MaLR -14 351 1 617 271 41 50 chr2 199997989 199998207 -53258376 + MIR SINE MIR 46 261 -1 24 0 0 0 chr2 199998562 199998586 -53257997 + AT_rich Low_complexity Low_complexity 1 24 0 21 71 0 0 chr2 199999788 199999830 -53256753 + AT_rich Low_complexity Low_complexity 1 42 0 402 363 12 6 chr2 200000109 200000269 -53256314 - MIR3 SINE MIR -1 207 47 387 0 0 0 chr2 200001012 200001055 -53255528 + (TG)n Simple_repeat Simple_repeat 2 44 0 241 367 113 39 chr2 200001078 200001334 -53255249 + L2 LINE L2 2994 3268 -4 22 0 0 0 chr2 200001358 200001380 -53255203 + AT_rich Low_complexity Low_complexity 1 22 0 2692 20 0 3 chr2 200001803 200002107 -53254476 + AluY SINE Alu 1 303 -8 189 0 0 0 chr2 200002108 200002129 -53254454 + (TA)n Simple_repeat Simple_repeat 2 22 0 26 0 0 0 chr2 200002160 200002186 -53254397 + AT_rich Low_complexity Low_complexity 1 26 0 732 256 68 91 chr2 200002293 200002855 -53253728 + L1MEc LINE L1 293 841 -5555 629 320 164 42 chr2 200003580 200004343 -53252240 + L2 LINE L2 2038 2893 -421 1419 24 0 0 chr2 200004874 200005041 -53251542 - L1P2 LINE L1 -380 5775 5609 * 2124 31 0 12 chr2 200005039 200005296 -53251287 + L1P2 LINE L1 5350 5603 -552 24 0 0 0 chr2 200005516 200005540 -53251043 + AT_rich Low_complexity Low_complexity 1 24 0 3158 35 0 0 chr2 200005979 200006355 -53250228 + L1PA4 LINE L1 5776 6151 -4 317 357 79 7 chr2 200006374 200006514 -53250069 + MIR3 SINE MIR 18 167 -41 200 108 0 27 chr2 200007186 200007223 -53249360 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 22 0 0 0 chr2 200008735 200008757 -53247826 + AT_rich Low_complexity Low_complexity 1 22 0 21 95 0 0 chr2 200008972 200009035 -53247548 + AT_rich Low_complexity Low_complexity 1 63 0 336 310 75 43 chr2 200009088 200009275 -53247308 - MIR SINE MIR -62 200 8 1355 197 61 29 chr2 200009554 200009667 -53246916 + AluJo SINE Alu 1 109 -203 234 0 0 0 chr2 200009667 200009693 -53246890 + (TAAAA)n Simple_repeat Simple_repeat 5 30 0 1355 197 61 29 chr2 200009693 200009858 -53246725 + AluJo SINE Alu 109 288 -24 321 408 83 9 chr2 200010427 200010655 -53245928 - MIR SINE MIR -7 255 11 515 227 33 7 chr2 200010727 200010877 -53245706 - MER103 DNA DNA -9 157 4 217 337 10 20 chr2 200011686 200011784 -53244799 + MER5A DNA MER1_type 4 100 -89 303 273 61 20 chr2 200012191 200012290 -53244293 + L2 LINE L2 2901 3003 -310 438 314 59 15 chr2 200012959 200013163 -53243420 + L2 LINE L2 3101 3313 0 187 286 71 14 chr2 200013174 200013244 -53243339 - MIR SINE MIR -155 107 34 967 182 62 0 chr2 200013379 200013571 -53243012 + MER3 DNA MER1_type 1 204 -5 23 33 0 0 chr2 200013903 200013933 -53242650 + AT_rich Low_complexity Low_complexity 1 30 0 572 293 128 23 chr2 200014489 200014755 -53241828 - L3b LINE CR1 -188 1395 1102 23 33 0 0 chr2 200017730 200017760 -53238823 + AT_rich Low_complexity Low_complexity 1 30 0 180 0 0 0 chr2 200017886 200017906 -53238677 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr2 200019250 200019271 -53237312 + AT_rich Low_complexity Low_complexity 1 21 0 2089 106 3 3 chr2 200019271 200019572 -53237011 - AluSc SINE Alu -8 301 1 28 0 0 0 chr2 200020776 200020804 -53235779 + AT_rich Low_complexity Low_complexity 1 28 0 7619 25 4 0 chr2 200020804 200021772 -53234811 - L1PA2 LINE L1 -11 6144 5177 1566 120 104 4 chr2 200022053 200022348 -53234235 - AluSx SINE Alu 0 321 1 251 294 44 103 chr2 200022459 200022595 -53233988 + L2 LINE L2 3141 3268 -4 42793 31 24 1 chr2 200023012 200028464 -53228119 - L1P1 LINE L1 -572 5583 4 196 333 0 0 chr2 200028887 200028947 -53227636 - MIR SINE MIR -64 144 85 331 345 77 30 chr2 200029575 200029810 -53226773 - MIR SINE MIR -15 247 2 21 36 0 0 chr2 200030341 200030369 -53226214 + AT_rich Low_complexity Low_complexity 1 28 0 1359 216 157 5 chr2 200030371 200030741 -53225842 - MSTB LTR MaLR 0 426 1 7284 161 80 36 chr2 200030766 200032273 -53224310 - MSTA-int LTR MaLR -2 1578 5 1785 142 129 26 chr2 200032277 200032665 -53223918 - MSTA LTR MaLR 0 428 1 22 0 0 0 chr2 200034202 200034224 -53222359 + AT_rich Low_complexity Low_complexity 1 22 0 6057 212 83 14 chr2 200034248 200035134 -53221449 - L1 LINE L1 -1147 4999 3965 1839 180 0 0 chr2 200035134 200035429 -53221154 + AluSx SINE Alu 1 295 -17 6057 212 83 14 chr2 200035429 200036049 -53220534 - L1 LINE L1 -2181 3965 3389 3185 152 21 11 chr2 200036048 200036836 -53219747 + L1P5 LINE L1 4996 5786 -370 * 1086 114 0 0 chr2 200036836 200036985 -53219598 + AluSq/x SINE Alu 1 149 -164 198 0 0 0 chr2 200037013 200037035 -53219548 + (TG)n Simple_repeat Simple_repeat 2 23 0 361 347 6 29 chr2 200037047 200037220 -53219363 + L1MEd LINE L1 1162 1330 -4875 2126 123 7 0 chr2 200037310 200037611 -53218972 + AluSx SINE Alu 1 303 -9 365 375 69 18 chr2 200037615 200037892 -53218691 + HAL1 LINE L1 1486 1776 -731 305 250 97 56 chr2 200038121 200038337 -53218246 + L1MEd LINE L1 2038 2262 -4134 335 275 0 0 chr2 200038843 200038923 -53217660 + L1MB8 LINE L1 5436 5515 -651 758 153 80 0 chr2 200038924 200039061 -53217522 + MER20 DNA MER1_type 71 218 -1 21 0 0 0 chr2 200039639 200039660 -53216923 + AT_rich Low_complexity Low_complexity 1 21 0 731 239 29 45 chr2 200041375 200041618 -53214965 + L1MB8 LINE L1 5917 6155 -23 663 230 5 101 chr2 200041680 200041889 -53214694 - MIR SINE MIR -5 257 69 18417 99 24 21 chr2 200042774 200045450 -53211133 - Charlie3 DNA MER1_type -4 2706 24 1948 163 39 30 chr2 200045653 200046015 -53210568 - MLT1A1 LTR MaLR 0 365 1 2226 117 10 0 chr2 200046915 200047224 -53209359 + AluSx SINE Alu 1 312 0 30 77 0 0 chr2 200047466 200047531 -53209052 + AT_rich Low_complexity Low_complexity 1 65 0 273 278 106 46 chr2 200048169 200048320 -53208263 + MIR SINE MIR 47 206 -56 226 281 115 0 chr2 200048732 200048828 -53207755 + MIR3 SINE MIR 71 177 -31 180 0 0 0 chr2 200048959 200048979 -53207604 + (TA)n Simple_repeat Simple_repeat 1 20 0 238 207 0 61 chr2 200048979 200049061 -53207522 + L1MC4 LINE L1 6616 6692 -1350 202 229 0 0 chr2 200049208 200049256 -53207327 + (TA)n Simple_repeat Simple_repeat 2 49 0 707 317 94 54 chr2 200049260 200049885 -53206698 - L1ME4a LINE L1 -152 5969 5320 233 292 14 14 chr2 200050586 200050658 -53205925 + MIR SINE MIR 17 88 -174 826 199 66 0 chr2 200051247 200051413 -53205170 - MER45A DNA AcHobo 0 178 2 24 0 0 0 chr2 200051742 200051766 -53204817 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 200052334 200052355 -53204228 + AT_rich Low_complexity Low_complexity 1 21 0 617 322 105 21 chr2 200052442 200052773 -53203810 + LTR16A LTR ERVL 19 377 -73 1318 178 8 96 chr2 200052773 200053127 -53203456 - MER45B DNA AcHobo 0 1040 718 2024 172 8 8 chr2 200053127 200053487 -53203096 + MLT1A1 LTR MaLR 6 365 0 642 199 137 19 chr2 200056347 200056508 -53200075 - MER58A DNA MER1_type 0 224 45 699 210 76 13 chr2 200057665 200057822 -53198761 - AluJb SINE Alu -21 291 125 445 308 8 0 chr2 200058036 200058153 -53198430 + MLT1K LTR MaLR 180 297 -291 275 209 15 15 chr2 200058328 200058395 -53198188 + MLT1K LTR MaLR 522 588 0 25 0 0 0 chr2 200058484 200058509 -53198074 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr2 200058645 200058666 -53197917 + AT_rich Low_complexity Low_complexity 1 21 0 2737 0 0 16 chr2 200058776 200059084 -53197499 + AluYa5 SINE Alu 1 303 -8 1715 149 38 0 chr2 200059091 200059379 -53197204 + AluSx SINE Alu 1 299 -13 261 0 0 0 chr2 200059381 200059410 -53197173 + (CA)n Simple_repeat Simple_repeat 1 29 0 462 363 53 4 chr2 200060384 200060610 -53195973 - MIR SINE MIR -12 250 14 4346 207 95 32 chr2 200060994 200062410 -53194173 + Charlie5 DNA MER1_type 1 1505 -1107 2385 203 21 12 chr2 200062417 200062983 -53193600 + Charlie5 DNA MER1_type 1616 2186 -426 279 203 109 43 chr2 200062977 200063115 -53193468 + Charlie5 DNA MER1_type 2438 2584 -28 * 1119 93 6 16 chr2 200064184 200064366 -53192217 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 1881 221 92 133 chr2 200066372 200068201 -53188382 - MER52A LTR ERV1 0 1755 1 723 193 28 11 chr2 200068288 200068469 -53188114 - MER52A LTR ERV1 -986 769 586 346 377 80 20 chr2 200068532 200068832 -53187751 + L3 LINE CR1 909 1226 -351 337 58 72 0 chr2 200068952 200069021 -53187562 + (TA)n Simple_repeat Simple_repeat 2 75 0 3959 276 59 20 chr2 200069025 200070918 -53185665 + L1ME1 LINE L1 2394 4363 -2063 2270 247 112 10 chr2 200071058 200072048 -53184535 + L1ME1 LINE L1 4629 5723 -723 2388 52 0 0 chr2 200072061 200072370 -53184213 - L1PA4 LINE L1 -857 5289 4981 7255 24 2 9 chr2 200072375 200073246 -53183337 + L1PA4 LINE L1 5285 6149 -6 1232 294 72 26 chr2 200073270 200073719 -53182864 + L1ME1 LINE L1 5728 6220 -226 1915 124 10 16 chr2 200073719 200074025 -53182558 - AluSx SINE Alu -8 304 1 1232 294 72 26 chr2 200074025 200074256 -53182327 + L1ME1 LINE L1 6220 6439 -7 1445 193 20 20 chr2 200074276 200074577 -53182006 + AluJo SINE Alu 1 301 -11 28 29 0 0 chr2 200074707 200074742 -53181841 + AT_rich Low_complexity Low_complexity 1 35 0 541 183 72 20 chr2 200074995 200075148 -53181435 + L1M4 LINE L1 4476 4636 -1510 1747 232 131 22 chr2 200075191 200075873 -53180710 - L1M4 LINE L1 -1084 5062 4307 1098 276 60 34 chr2 200075960 200076463 -53180120 + L1ME1 LINE L1 5647 6162 -4 21 0 0 0 chr2 200076692 200076713 -53179870 + AT_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr2 200078165 200078201 -53178382 + AT_rich Low_complexity Low_complexity 1 36 0 682 322 45 38 chr2 200079107 200079504 -53177079 - L2 LINE L2 -2229 1085 686 1209 290 58 9 chr2 200079683 200080114 -53176469 - LTR40b LTR ERVL -10 452 1 23 0 0 0 chr2 200082055 200082078 -53174505 + AT_rich Low_complexity Low_complexity 1 23 0 1780 225 94 5 chr2 200082696 200083123 -53173460 + MLT1D LTR MaLR 41 505 0 511 157 19 0 chr2 200083131 200083239 -53173344 + GA-rich Low_complexity Low_complexity 3 112 0 335 152 0 15 chr2 200085990 200086056 -53170527 + CT-rich Low_complexity Low_complexity 3 67 0 21 0 0 0 chr2 200088077 200088098 -53168485 + AT_rich Low_complexity Low_complexity 1 21 0 23 68 0 0 chr2 200088293 200088337 -53168246 + AT_rich Low_complexity Low_complexity 1 44 0 661 216 6 94 chr2 200088525 200088696 -53167887 + MER106B DNA MER1_type 1 156 -903 44 0 0 0 chr2 200088700 200088744 -53167839 + AT_rich Low_complexity Low_complexity 1 44 0 803 365 80 20 chr2 200089164 200089898 -53166685 - L3 LINE CR1 -445 1132 355 288 381 40 23 chr2 200090343 200090519 -53166064 - L3b LINE CR1 -48 1535 1357 332 303 76 78 chr2 200092983 200093366 -53163217 + HAL1b LINE L1 16 397 -951 5689 194 43 24 chr2 200093789 200095882 -53160701 - L1MC1 LINE L1 -20 6593 4463 6875 187 56 34 chr2 200095890 200098275 -53158308 - L1MC1 LINE L1 -3868 2558 27 884 119 0 0 chr2 200098861 200099034 -53157549 + AluSg/x SINE Alu 156 328 0 25 0 0 0 chr2 200099076 200099101 -53157482 + AT_rich Low_complexity Low_complexity 1 25 0 487 322 17 21 chr2 200099735 200099968 -53156615 - HAL1 LINE L1 -204 2303 2072 730 290 119 26 chr2 200100389 200100734 -53155849 - LTR16C LTR ERVL 0 491 115 194 105 26 0 chr2 200101263 200101301 -53155282 + T-rich Low_complexity Low_complexity 2 40 0 2107 101 14 0 chr2 200101341 200101627 -53154956 - AluSx SINE Alu -19 293 4 270 0 0 0 chr2 200102144 200102174 -53154409 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 381 227 21 10 chr2 200102774 200102871 -53153712 + MER5A DNA MER1_type 9 106 -83 33 0 0 0 chr2 200103455 200103488 -53153095 + AT_rich Low_complexity Low_complexity 1 33 0 1207 184 0 51 chr2 200103635 200103866 -53152717 - MSTC LTR MaLR -4 424 206 1733 172 0 23 chr2 200103866 200104169 -53152414 - AluJo SINE Alu -6 306 11 1207 184 0 51 chr2 200104169 200104192 -53152391 - MSTC LTR MaLR -222 206 183 432 244 0 50 chr2 200104228 200104309 -53152274 + L1MD2 LINE L1 6044 6119 -240 1577 158 103 29 chr2 200104309 200104658 -53151925 - THE1C LTR MaLR 0 375 1 432 244 0 50 chr2 200104658 200104695 -53151888 + L1MD2 LINE L1 6119 6156 -203 709 181 127 18 chr2 200104695 200104861 -53151722 - MSTC LTR MaLR -244 184 1 2827 200 69 19 chr2 200105090 200105731 -53150852 - L1MD2 LINE L1 -32 6327 5655 201 154 0 0 chr2 200106210 200106249 -53150334 + (TATG)n Simple_repeat Simple_repeat 2 40 0 21 36 0 0 chr2 200106336 200106364 -53150219 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 200106544 200106568 -53150015 + AT_rich Low_complexity Low_complexity 1 24 0 245 125 0 21 chr2 200106568 200106616 -53149967 + (GA)n Simple_repeat Simple_repeat 2 48 0 250 256 13 26 chr2 200107943 200108021 -53148562 + (TA)n Simple_repeat Simple_repeat 2 78 0 23 0 0 0 chr2 200110684 200110707 -53145876 + AT_rich Low_complexity Low_complexity 1 23 0 56 55 0 0 chr2 200111023 200111114 -53145469 + AT_rich Low_complexity Low_complexity 1 91 0 180 111 0 0 chr2 200111520 200111547 -53145036 + (CA)n Simple_repeat Simple_repeat 1 27 0 1097 325 40 22 chr2 200112059 200112637 -53143946 + L2 LINE L2 2722 3311 -2 282 341 71 88 chr2 200112644 200113008 -53143575 - L2 LINE L2 0 3272 2915 743 346 74 19 chr2 200113031 200113623 -53142960 - L2 LINE L2 -1019 2295 1671 11299 31 1 2 chr2 200113805 200115938 -53140645 + L1PA3 LINE L1 4038 6155 0 26 0 0 0 chr2 200116465 200116491 -53140092 + AT_rich Low_complexity Low_complexity 1 26 0 27 0 0 0 chr2 200117751 200117778 -53138805 + AT_rich Low_complexity Low_complexity 1 27 0 261 88 123 35 chr2 200118606 200118663 -53137920 - MLT1B LTR MaLR -328 62 1 477 312 53 7 chr2 200118686 200118971 -53137612 - L1ME4a LINE L1 -281 5840 5543 408 239 11 0 chr2 200119433 200119521 -53137062 - MIR SINE MIR -88 120 32 427 252 119 21 chr2 200120198 200120341 -53136242 - MIR SINE MIR -71 191 35 224 302 22 67 chr2 200120912 200121093 -53135490 - MER5A DNA MER1_type -1 188 7 23 33 0 0 chr2 200122309 200122339 -53134244 + AT_rich Low_complexity Low_complexity 1 30 0 513 266 68 119 chr2 200124750 200125219 -53131364 + LTR33A LTR ERVL 7 451 -72 989 327 56 10 chr2 200125254 200125664 -53130919 + LTR16B LTR ERVL 36 464 0 1515 204 86 30 chr2 200125858 200126255 -53130328 - LTR52 LTR ERVL -2 419 1 274 274 88 0 chr2 200126294 200126396 -53130187 + MER103 DNA DNA 55 165 -1 268 306 0 47 chr2 200127548 200127633 -53128950 - L2 LINE L2 -4 3268 3188 220 295 62 45 chr2 200128066 200128178 -53128405 + MIR SINE MIR 93 206 -56 225 0 0 0 chr2 200131121 200131146 -53125437 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 38 0 0 0 chr2 200131738 200131776 -53124807 + AT_rich Low_complexity Low_complexity 1 38 0 407 163 12 0 chr2 200131910 200131990 -53124593 + CT-rich Low_complexity Low_complexity 1 81 0 23 33 0 0 chr2 200134595 200134625 -53121958 + AT_rich Low_complexity Low_complexity 1 30 0 1501 92 35 4 chr2 200134873 200135100 -53121483 + L1PA13 LINE L1 5927 6160 -3 21 0 0 0 chr2 200135566 200135587 -53120996 + AT_rich Low_complexity Low_complexity 1 21 0 246 328 177 0 chr2 200135716 200135902 -53120681 - MIR SINE MIR -7 255 37 277 218 99 30 chr2 200136476 200136577 -53120006 - MIR SINE MIR -85 177 70 183 409 0 0 chr2 200136692 200136763 -53119820 + MER5B DNA MER1_type 63 133 -45 6835 66 4 0 chr2 200136888 200138475 -53118108 - L1PA6 LINE L1 -2 6152 4562 4571 68 2 0 chr2 200138511 200139110 -53117473 - L1PA6 LINE L1 -1721 4425 3826 2328 62 0 0 chr2 200139108 200139400 -53117183 + L1P LINE L1 3368 3659 -2487 * 686 169 39 0 chr2 200139401 200139531 -53117052 - L1MB2 LINE L1 -43 6128 5994 226 160 0 40 chr2 200139542 200139592 -53116991 - L1MC4 LINE L1 -1 8041 7994 2970 266 61 20 chr2 200139636 200139959 -53116624 - L1MC4 LINE L1 -127 7681 7373 2181 117 45 31 chr2 200139959 200140317 -53116266 - THE1B LTR MaLR -1 363 1 2970 266 61 20 chr2 200140317 200141225 -53115358 - L1MC4 LINE L1 -435 7373 6484 207 207 11 35 chr2 200141413 200141500 -53115083 + GA-rich Low_complexity Low_complexity 4 88 0 2081 128 3 0 chr2 200141515 200141813 -53114770 - AluSx SINE Alu -13 299 1 23 0 0 0 chr2 200142318 200142341 -53114242 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr2 200142464 200142494 -53114089 + AT_rich Low_complexity Low_complexity 1 30 0 615 280 97 25 chr2 200142839 200143118 -53113465 + L1ME3A LINE L1 5867 6165 -5 3085 171 27 5 chr2 200144958 200145597 -53110986 - L1 LINE L1 -1259 4887 4235 249 300 154 9 chr2 200145758 200145868 -53110715 + L2 LINE L2 3173 3298 -15 351 293 0 19 chr2 200145938 200146044 -53110539 - LTR33 LTR ERVL -7 514 411 588 298 99 19 chr2 200146088 200146410 -53110173 - LTR33 LTR ERVL -173 348 1 729 255 68 69 chr2 200146554 200147282 -53109301 + L1MC5 LINE L1 7271 7907 -54 21 89 0 0 chr2 200147708 200147764 -53108819 + AT_rich Low_complexity Low_complexity 1 56 0 653 316 59 47 chr2 200147939 200148942 -53107641 - L1M4 LINE L1 -1305 4841 3821 1491 278 77 56 chr2 200149122 200149876 -53106707 - L1M4c LINE L1 -4431 2707 1798 2521 68 0 0 chr2 200149876 200150186 -53106397 - AluY SINE Alu -1 310 1 1491 278 77 56 chr2 200150186 200150614 -53105969 - L1M4c LINE L1 -5340 1798 1380 280 336 36 7 chr2 200150781 200150918 -53105665 - L1M4c LINE L1 -5667 1188 1048 251 278 67 56 chr2 200151231 200151411 -53105172 - L1M4c LINE L1 -6586 273 92 255 316 12 99 chr2 200152245 200152416 -53104167 - MIR SINE MIR 0 262 107 692 84 0 37 chr2 200152618 200152725 -53103858 + L1PA10 LINE L1 6066 6168 0 249 200 17 142 chr2 200153034 200153154 -53103429 + L1MC4 LINE L1 7403 7507 -535 439 285 74 67 chr2 200153154 200153585 -53102998 + L1MC5 LINE L1 7346 7779 -182 209 227 0 0 chr2 200153772 200153816 -53102767 + T-rich Low_complexity Low_complexity 1 44 0 30 59 0 0 chr2 200154340 200154391 -53102192 + AT_rich Low_complexity Low_complexity 1 51 0 281 308 68 26 chr2 200154637 200154754 -53101829 + MIR3 SINE MIR 59 180 -28 230 206 27 55 chr2 200154771 200154844 -53101739 - MIR SINE MIR -106 156 86 1244 116 87 170 chr2 200155189 200155331 -53101252 - MER44D DNA MER2_type -1882 609 457 306 73 0 0 chr2 200155331 200155372 -53101211 + (TA)n Simple_repeat Simple_repeat 2 42 0 1244 116 87 170 chr2 200155372 200155599 -53100984 - MER44D DNA MER2_type -2034 457 1 498 306 14 16 chr2 200156325 200156551 -53100032 - MIR SINE MIR -6 256 33 630 260 128 10 chr2 200157517 200157713 -53098870 - MIR SINE MIR 0 262 44 2534 64 0 0 chr2 200157770 200158081 -53098502 + AluY SINE Alu 1 311 0 261 137 20 59 chr2 200159399 200159450 -53097133 - L2 LINE L2 -9 3304 3256 2209 69 0 3 chr2 200161488 200161778 -53094805 + AluY SINE Alu 1 289 -22 22 0 0 0 chr2 200162735 200162757 -53093826 + AT_rich Low_complexity Low_complexity 1 22 0 183 100 0 0 chr2 200164195 200164225 -53092358 + (TG)n Simple_repeat Simple_repeat 2 31 0 1196 87 5 92 chr2 200165562 200165758 -53090825 + AluY SINE Alu 2 180 -131 204 97 0 0 chr2 200165891 200165922 -53090661 + (TG)n Simple_repeat Simple_repeat 1 31 0 198 103 0 0 chr2 200165928 200165957 -53090626 + (GAAA)n Simple_repeat Simple_repeat 4 32 0 1260 95 0 0 chr2 200166152 200166320 -53090263 + AluY SINE Alu 141 308 -3 5530 187 256 20 chr2 200166917 200168336 -53088247 + MER52A LTR ERV1 1 1755 0 270 222 0 16 chr2 200169016 200169079 -53087504 + (TG)n Simple_repeat Simple_repeat 1 62 0 430 338 13 26 chr2 200169114 200169268 -53087315 + MIR SINE MIR 2 153 -109 1678 230 68 22 chr2 200170507 200170963 -53085620 + MLT2B1 LTR ERVL 1 477 -43 668 132 0 16 chr2 200170963 200171084 -53085499 + (TCTA)n Simple_repeat Simple_repeat 3 121 0 33 0 0 0 chr2 200171112 200171145 -53085438 + AT_rich Low_complexity Low_complexity 1 33 0 24 32 0 0 chr2 200172114 200172145 -53084438 + AT_rich Low_complexity Low_complexity 1 31 0 227 252 14 21 chr2 200172191 200172283 -53084300 + A-rich Low_complexity Low_complexity 1 138 0 22 0 0 0 chr2 200173669 200173691 -53082892 + AT_rich Low_complexity Low_complexity 1 22 0 1856 158 65 8 chr2 200173781 200174136 -53082447 + THE1C LTR MaLR 1 375 0 2354 72 3 7 chr2 200174279 200174585 -53081998 + AluY SINE Alu 1 305 -6 217 313 15 0 chr2 200174602 200174669 -53081914 + MIR SINE MIR 117 184 -78 29 0 0 0 chr2 200174789 200174818 -53081765 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr2 200174864 200174888 -53081695 + AT_rich Low_complexity Low_complexity 1 24 0 212 111 0 44 chr2 200175474 200175519 -53081064 + (TTTTG)n Simple_repeat Simple_repeat 1 43 0 25 75 0 0 chr2 200175920 200175973 -53080610 + AT_rich Low_complexity Low_complexity 1 53 0 22 0 0 0 chr2 200176920 200176942 -53079641 + AT_rich Low_complexity Low_complexity 1 22 0 376 291 51 11 chr2 200177199 200177374 -53079209 - MIR SINE MIR -60 202 21 1541 210 7 0 chr2 200177988 200178293 -53078290 - AluJo SINE Alu 0 312 6 1280 227 44 78 chr2 200178777 200179015 -53077568 + LTR52 LTR ERVL 1 220 -201 1966 68 44 0 chr2 200179015 200179315 -53077268 - AluY SINE Alu 0 331 21 1280 227 44 78 chr2 200179315 200179511 -53077072 + LTR52 LTR ERVL 220 421 0 21 0 0 0 chr2 200179789 200179810 -53076773 + AT_rich Low_complexity Low_complexity 1 21 0 185 109 73 0 chr2 200180500 200180555 -53076028 + (TA)n Simple_repeat Simple_repeat 2 60 0 1367 186 12 107 chr2 200180972 200181375 -53075208 - MLT1A1 LTR MaLR 0 365 1 213 163 0 0 chr2 200182162 200182211 -53074372 + A-rich Low_complexity Low_complexity 1 49 0 9021 31 15 1 chr2 200182467 200183839 -53072744 - L1P2 LINE L1 -487 5668 4280 896 214 41 34 chr2 200183839 200184106 -53072477 + LTR37A LTR ERV1 157 425 -1 1473 205 0 14 chr2 200185100 200185383 -53071200 - AluJo SINE Alu -22 290 12 423 378 100 11 chr2 200186127 200186307 -53070276 + MER91A DNA MER1_type 1 196 0 21 36 0 0 chr2 200187227 200187255 -53069328 + AT_rich Low_complexity Low_complexity 1 28 0 344 111 0 49 chr2 200187688 200187769 -53068814 + (TTCC)n Simple_repeat Simple_repeat 4 80 0 182 170 0 21 chr2 200187766 200187813 -53068770 + CT-rich Low_complexity Low_complexity 3 48 0 * 445 308 12 35 chr2 200188157 200188326 -53068257 + MIR3 SINE MIR 3 167 -41 423 316 123 57 chr2 200189478 200189941 -53066642 - L1ME3A LINE L1 -264 5906 5475 201 39 0 0 chr2 200189941 200189967 -53066616 + (TTTTA)n Simple_repeat Simple_repeat 3 28 0 1452 218 0 0 chr2 200189972 200190247 -53066336 - AluJo SINE Alu -37 275 1 423 316 123 57 chr2 200190247 200190297 -53066286 - L1ME3A LINE L1 -698 5472 5348 33 43 0 0 chr2 200191905 200191952 -53064631 + AT_rich Low_complexity Low_complexity 1 47 0 22 94 0 0 chr2 200191995 200192059 -53064524 + AT_rich Low_complexity Low_complexity 1 64 0 354 138 0 0 chr2 200193417 200193475 -53063108 + (TTCC)n Simple_repeat Simple_repeat 2 59 0 245 178 44 22 chr2 200194108 200194198 -53062385 + (TA)n Simple_repeat Simple_repeat 2 93 0 239 317 99 21 chr2 200194316 200194458 -53062125 + MLT1G1 LTR MaLR 166 318 -277 490 71 24 0 chr2 200194636 200194720 -53061863 + (TCTA)n Simple_repeat Simple_repeat 4 89 0 231 264 60 23 chr2 200194869 200195081 -53061502 - L1ME3A LINE L1 -1008 5138 4915 223 374 9 17 chr2 200195506 200195621 -53060962 + L3 LINE CR1 1453 1566 -11 237 348 51 0 chr2 200195634 200195772 -53060811 + MIR SINE MIR 37 181 -81 525 333 157 14 chr2 200197588 200198002 -53058581 + L2 LINE L2 2839 3311 -2 1878 147 24 37 chr2 200199142 200199522 -53057061 + THE1C LTR MaLR 1 375 0 2407 74 3 0 chr2 200199912 200200209 -53056374 + AluSp SINE Alu 2 299 -14 1419 106 76 4 chr2 200200274 200200388 -53056195 - L1MA5A LINE L1 -5 6292 6188 420 20 0 0 chr2 200200388 200200437 -53056146 + (TG)n Simple_repeat Simple_repeat 2 50 0 1419 106 76 4 chr2 200200437 200200559 -53056024 - L1MA5A LINE L1 -109 6188 6039 2404 91 0 0 chr2 200203311 200203620 -53052963 + AluY SINE Alu 3 311 0 775 221 0 0 chr2 200205239 200205434 -53051149 + L1MA9 LINE L1 1710 1904 -4945 3960 248 14 43 chr2 200205448 200206444 -53050139 + L1PA13 LINE L1 1 967 -5820 798 186 5 234 chr2 200206498 200206589 -53049994 + L1PA13 LINE L1 2531 2641 -4156 5796 58 1 3 chr2 200206589 200207320 -53049263 + L1PA7 LINE L1 5406 6135 -19 798 186 5 234 chr2 200207320 200207793 -53048790 + L1PA13 LINE L1 2641 2966 -3831 391 35 17 17 chr2 200207883 200207941 -53048642 + (CA)n Simple_repeat Simple_repeat 2 59 0 557 130 0 0 chr2 200208012 200208104 -53048479 - L1MA1 LINE L1 0 6302 6211 4637 185 28 19 chr2 200208167 200209765 -53046818 + L1MA9 LINE L1 5275 6874 -140 216 214 0 0 chr2 200210085 200210141 -53046442 + (TA)n Simple_repeat Simple_repeat 2 57 0 239 324 142 20 chr2 200210472 200210880 -53045703 + L1ME4a LINE L1 5660 6117 -4 26 0 0 0 chr2 200211093 200211119 -53045464 + AT_rich Low_complexity Low_complexity 1 26 0 1386 140 21 8 chr2 200211755 200211998 -53044585 - L1MA8 LINE L1 -270 6021 5776 403 126 6 75 chr2 200212021 200212195 -53044388 + (TA)n Simple_repeat Simple_repeat 2 163 0 360 0 0 0 chr2 200212326 200212366 -53044217 + (TA)n Simple_repeat Simple_repeat 1 40 0 * 498 17 0 0 chr2 200212365 200212424 -53044159 + (GA)n Simple_repeat Simple_repeat 2 60 0 2108 92 0 7 chr2 200212424 200212705 -53043878 - AluSq SINE Alu -34 279 1 435 217 0 0 chr2 200212705 200212797 -53043786 - L1MA8 LINE L1 -515 5785 5694 499 194 8 90 chr2 200212802 200212936 -53043647 + L1MA8 LINE L1 5987 6109 -182 689 214 28 14 chr2 200212937 200213082 -53043501 - FAM SINE Alu -20 165 19 939 152 34 0 chr2 200213086 200213264 -53043319 + L1MA8 LINE L1 6106 6289 -2 2982 96 13 65 chr2 200213463 200213941 -53042642 - MLT2A2 LTR ERVL 0 453 1 2228 139 58 41 chr2 200216139 200216659 -53039924 + MLT2A2 LTR ERVL 1 554 0 460 281 68 41 chr2 200216853 200217074 -53039509 + MLT1J2 LTR MaLR 3 229 -221 204 255 0 0 chr2 200218137 200218184 -53038399 - MIR SINE MIR 0 262 216 576 172 8 8 chr2 200219950 200220072 -53036511 - L1 LINE L1 -1565 4581 4460 212 171 0 0 chr2 200220076 200220117 -53036466 + T-rich Low_complexity Low_complexity 1 41 0 470 321 61 0 chr2 200220518 200220714 -53035869 - MER90 LTR ERV1 -66 548 341 722 181 114 0 chr2 200221302 200221451 -53035132 - FRAM SINE Alu -12 164 1 22 35 0 0 chr2 200222931 200222960 -53033623 + AT_rich Low_complexity Low_complexity 1 29 0 291 298 121 68 chr2 200224216 200224464 -53032119 + L2 LINE L2 2434 2694 -620 203 152 0 0 chr2 200224475 200224508 -53032075 + (TATATG)n Simple_repeat Simple_repeat 2 34 0 1891 161 24 30 chr2 200224509 200224881 -53031702 + Tigger2a DNA MER2_type 1 370 -64 19982 172 21 27 chr2 200224891 200228018 -53028565 + L1MA3 LINE L1 17 3109 -4456 2150 110 0 3 chr2 200228018 200228310 -53028273 + AluSq SINE Alu 2 292 -21 19982 172 21 27 chr2 200228310 200229328 -53027255 + L1MA3 LINE L1 3109 4132 -3433 1274 180 0 0 chr2 200229338 200229571 -53027012 + L1MA3 LINE L1 6058 6290 -1275 1853 193 46 32 chr2 200229571 200230114 -53026469 - MLT2A2 LTR ERVL 0 554 1 1622 219 6 0 chr2 200230118 200230474 -53026109 + L1MA3 LINE L1 6290 6647 -918 796 216 57 0 chr2 200230474 200230650 -53025933 + MSTB LTR MaLR 241 426 0 7888 195 29 29 chr2 200230650 200231113 -53025470 + MSTA-int LTR MaLR 1 463 -1188 1923 131 7 7 chr2 200231113 200231396 -53025187 + AluSq SINE Alu 1 283 -30 7888 195 29 29 chr2 200231396 200232583 -53024000 + MSTA-int LTR MaLR 462 1651 0 2252 167 36 0 chr2 200232583 200232996 -53023587 + MSTA LTR MaLR 1 428 0 5203 142 42 30 chr2 200232996 200234054 -53022529 + L1MA3 LINE L1 6654 7724 0 192 40 0 0 chr2 200234147 200234172 -53022411 + (CA)n Simple_repeat Simple_repeat 2 26 0 225 0 0 0 chr2 200234236 200234261 -53022322 + (TG)n Simple_repeat Simple_repeat 2 26 0 313 282 24 0 chr2 200234274 200234359 -53022224 + L2 LINE L2 2734 2820 -494 521 208 63 1 chr2 200235039 200235299 -53021284 - ERVL-A2 LTR ERVL -243 5521 5211 417 312 6 12 chr2 200235536 200235706 -53020877 - L1MC4 LINE L1 -549 7493 7325 253 234 13 0 chr2 200235706 200235783 -53020800 + (TA)n Simple_repeat Simple_repeat 2 79 0 322 328 151 0 chr2 200235818 200236004 -53020579 - L1MC4 LINE L1 -731 7311 7098 554 279 35 96 chr2 200236143 200236537 -53020046 - L1MC4 LINE L1 -966 7076 6707 2416 87 0 0 chr2 200236715 200237024 -53019559 + AluY SINE Alu 1 309 -2 2210 133 11 11 chr2 200237311 200237665 -53018918 + THE1A LTR MaLR 1 354 -1 10539 110 18 23 chr2 200237666 200239255 -53017328 + THE1A-int LTR MaLR 1 1580 0 2262 122 11 8 chr2 200239256 200239608 -53016975 + THE1A LTR MaLR 3 355 0 289 237 54 0 chr2 200239818 200239911 -53016672 + MLT1B LTR MaLR 2 99 -291 1697 224 42 42 chr2 200239913 200240457 -53016126 + L1 LINE L1 4564 5107 -1039 1890 135 44 36 chr2 200240457 200240638 -53015945 + THE1C LTR MaLR 3 181 -194 4299 73 45 0 chr2 200240638 200241198 -53015385 + LTR14C LTR ERVK 2 586 -1 1890 135 44 36 chr2 200241198 200241379 -53015204 + THE1C LTR MaLR 181 368 -7 865 141 0 6 chr2 200241380 200241536 -53015047 + THE1C-int LTR MaLR 1 155 -1425 604 51 13 0 chr2 200241565 200241644 -53014939 + THE1-int LTR MaLR 1397 1476 -104 2764 100 13 0 chr2 200241652 200242041 -53014542 - MLT2A2 LTR ERVL -59 394 1 12469 73 36 44 chr2 200242041 200243915 -53012668 - HERVL-A2 LTR ERVL 0 5654 3795 2723 17 0 0 chr2 200243938 200244238 -53012345 + AluYa5 SINE Alu 11 310 -1 3789 152 23 5 chr2 200244241 200244892 -53011691 + L1PA16 LINE L1 5500 6162 -4 3011 102 51 0 chr2 200244949 200245334 -53011249 + MLT2A2 LTR ERVL 1 365 -88 342 0 0 0 chr2 200245334 200245372 -53011211 + (TC)n Simple_repeat Simple_repeat 2 39 0 342 0 0 0 chr2 200245371 200245409 -53011174 + (TA)n Simple_repeat Simple_repeat 1 38 0 3011 102 51 0 chr2 200245372 200245454 -53011129 + MLT2A2 LTR ERVL 365 453 0 1526 83 9 0 chr2 200245454 200245670 -53010913 + HERVL-A2 LTR ERVL 1 218 -5436 790 254 8 8 chr2 200245671 200245935 -53010648 - L1PA15-16 LINE L1 -4706 2143 1880 2043 119 10 7 chr2 200246336 200246499 -53010084 - AluSx SINE Alu -17 295 129 207 0 0 0 chr2 200246499 200246522 -53010061 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2043 119 10 7 chr2 200246522 200246652 -53009931 - AluSx SINE Alu -183 129 1 2096 121 10 3 chr2 200247001 200247299 -53009284 + AluSq SINE Alu 1 300 -13 605 123 9 0 chr2 200248166 200248280 -53008303 - L1MA7 LINE L1 -1 6290 6176 2186 162 6 6 chr2 200249161 200249526 -53007057 + MLT1A1 LTR MaLR 1 365 0 21 36 0 0 chr2 200250979 200251007 -53005576 + AT_rich Low_complexity Low_complexity 1 28 0 201 121 0 0 chr2 200251338 200251371 -53005212 + (TTTC)n Simple_repeat Simple_repeat 4 36 0 204 97 0 0 chr2 200251373 200251404 -53005179 + (CA)n Simple_repeat Simple_repeat 1 31 0 498 273 0 20 chr2 200251869 200252019 -53004564 - MER58B DNA MER1_type -2 339 193 318 26 0 0 chr2 200252023 200252062 -53004521 + (CA)n Simple_repeat Simple_repeat 1 39 0 208 325 48 56 chr2 200252070 200252083 -53004500 - L2 LINE L2 -33 3239 3227 2091 158 9 6 chr2 200252083 200252425 -53004158 + MER61A LTR ERV1 1 343 0 208 325 48 56 chr2 200252425 200252537 -53004046 - L2 LINE L2 -45 3227 3115 471 347 60 13 chr2 200252826 200253209 -53003374 - MLT1I LTR MaLR -3 406 6 333 0 0 0 chr2 200253373 200253410 -53003173 + (CAA)n Simple_repeat Simple_repeat 2 38 0 1012 224 126 96 chr2 200253458 200254226 -53002357 + LTR1B LTR ERV1 1 983 -37 433 240 8 40 chr2 200254264 200254389 -53002194 + LTR28 LTR ERV1 900 1020 0 300 305 62 23 chr2 200307723 200307900 -52948683 + HAL1 LINE L1 203 386 -2121 456 292 0 0 chr2 200307904 200308024 -52948559 + L2 LINE L2 3194 3313 0 6176 188 36 10 chr2 200308487 200308567 -52948016 - L1 LINE L1 -904 5242 5166 2195 100 9 40 chr2 200308567 200308888 -52947695 - AluSq SINE Alu -2 311 1 6176 188 36 10 chr2 200308888 200310254 -52946329 - L1 LINE L1 -980 5166 3759 8063 97 7 6 chr2 200310355 200311581 -52945002 + HERVH LTR ERV1 1760 2987 -4726 745 144 41 7 chr2 200311575 200311721 -52944862 + HERVH LTR ERV1 3140 3290 -4423 * 3240 98 4 6 chr2 200311711 200312210 -52944373 + HERVH LTR ERV1 3492 3989 -3724 * 3981 162 0 1 chr2 200312205 200312878 -52943705 + HERVH LTR ERV1 4478 5149 -2564 1246 144 23 0 chr2 200312879 200313094 -52943489 + HERVH LTR ERV1 5600 5819 -1894 376 150 0 0 chr2 200313094 200313154 -52943429 + HERVH LTR ERV1 7324 7383 -330 2506 82 3 8 chr2 200313254 200313621 -52942962 - HERVH LTR ERV1 -6006 1707 1343 3932 139 82 55 chr2 200313621 200315044 -52941539 - pTR5 LTR ERV1 0 2606 1524 * 7902 107 45 6 chr2 200315043 200316339 -52940244 - HERVH LTR ERV1 -6367 1346 1 2600 99 95 7 chr2 200316341 200316753 -52939830 - LTR7 LTR ERV1 -2 448 1 259 136 0 0 chr2 200316853 200316897 -52939686 - HAL1 LINE L1 -484 2023 1980 518 287 82 13 chr2 200316952 200317463 -52939120 - HAL1 LINE L1 -859 1648 1062 22 99 0 0 chr2 200318482 200318553 -52938030 + AT_rich Low_complexity Low_complexity 1 71 0 2148 147 0 0 chr2 200318689 200319001 -52937582 + AluSx SINE Alu 1 312 0 672 93 0 0 chr2 200319001 200319098 -52937485 + (GGAA)n Simple_repeat Simple_repeat 1 97 0 540 221 121 10 chr2 200319209 200319408 -52937175 - MER58A DNA MER1_type -3 221 1 1330 305 101 33 chr2 200319488 200319561 -52937022 + L2 LINE L2 2218 2285 -1028 1835 199 0 0 chr2 200319561 200319863 -52936720 - AluJb SINE Alu -10 302 1 1330 305 101 33 chr2 200319863 200320815 -52935768 + L2 LINE L2 2285 3313 0 228 264 83 58 chr2 200321040 200321161 -52935422 - L2 LINE L2 -1 3312 3189 5061 102 6 3 chr2 200323845 200324530 -52932053 + LTR12 LTR ERV1 2 688 0 244 267 167 0 chr2 200324782 200324902 -52931681 + MIR SINE MIR 123 262 0 1979 96 68 7 chr2 200325625 200325906 -52930677 + AluSq SINE Alu 1 298 -15 300 264 62 70 chr2 200325924 200326053 -52930530 - MIR SINE MIR -61 147 20 214 171 24 0 chr2 200329004 200329045 -52927538 + MIR SINE MIR 96 137 -125 239 70 23 23 chr2 200329960 200330003 -52926580 + LTR67 LTR ERVL 475 517 -40 497 283 141 0 chr2 200330090 200330288 -52926295 + MIR SINE MIR 31 256 -6 2380 104 0 0 chr2 200330566 200330875 -52925708 + AluSc SINE Alu 1 309 0 352 244 13 0 chr2 200333426 200333504 -52923079 - LTR67 LTR ERVL -335 222 144 2512 248 49 47 chr2 200333719 200334457 -52922126 + MER21B LTR ERV1 1 739 -124 265 359 98 51 chr2 200334522 200335127 -52921456 + L2 LINE L2 2224 2856 -458 23 78 0 0 chr2 200335147 200335198 -52921385 + AT_rich Low_complexity Low_complexity 1 51 0 1871 220 74 10 chr2 200335562 200336037 -52920546 + MLT1D LTR MaLR 1 595 0 198 322 144 11 chr2 200336127 200336217 -52920366 + L2 LINE L2 3171 3272 0 1011 213 85 5 chr2 200338031 200338242 -52918341 + MER74C LTR ERVL 2 229 -231 5020 224 8 2 chr2 200338244 200339197 -52917386 + HERVL74 LTR ERVL 2391 3349 -2336 1283 240 43 33 chr2 200339265 200339965 -52916618 + HERVL74 LTR ERVL 4864 5665 -20 2178 200 38 16 chr2 200339984 200340434 -52916149 + MER74C LTR ERVL 1 460 0 1556 152 9 78 chr2 200341553 200341888 -52914695 + AluJo SINE Alu 1 312 0 22 0 0 0 chr2 200342325 200342347 -52914236 + AT_rich Low_complexity Low_complexity 1 22 0 231 394 10 0 chr2 200342420 200342524 -52914059 - MIR SINE MIR -65 143 39 317 321 85 33 chr2 200343086 200343298 -52913285 - L3 LINE CR1 0 1577 1355 593 343 93 18 chr2 200343423 200343872 -52912711 - L3 LINE CR1 -473 1104 622 412 288 53 18 chr2 200345423 200345593 -52910990 - L2 LINE L2 -43 3270 3095 375 276 29 77 chr2 200345606 200345776 -52910807 - L2 LINE L2 0 3313 3152 988 347 19 28 chr2 200346317 200346778 -52909805 + ERVL LTR ERVL 4138 4594 -1170 303 379 0 0 chr2 200347078 200347194 -52909389 + ERVL LTR ERVL 5031 5146 -618 2086 162 12 3 chr2 200348068 200348402 -52908181 - MER1B DNA MER1_type 0 337 1 2061 132 3 6 chr2 200349030 200349341 -52907242 + AluSg SINE Alu 1 310 0 3387 27 2 7 chr2 200349392 200349801 -52906782 + L1PA4 LINE L1 5737 6143 -12 210 37 0 0 chr2 200349801 200349828 -52906755 + (TA)n Simple_repeat Simple_repeat 2 28 0 1455 259 66 3 chr2 200350183 200350761 -52905822 - MER114 LTR ERV -6 642 29 31 26 0 0 chr2 200350901 200350939 -52905644 + AT_rich Low_complexity Low_complexity 1 38 0 25 0 0 0 chr2 200351124 200351149 -52905434 + AT_rich Low_complexity Low_complexity 1 25 0 528 324 101 52 chr2 200351217 200351733 -52904850 - L2 LINE L2 -131 3182 2644 521 288 56 0 chr2 200353154 200353279 -52903304 + MER119 DNA MER1_type 1 132 -451 241 222 37 0 chr2 200353384 200353438 -52903145 + MER119 DNA MER1_type 528 583 0 23 0 0 0 chr2 200353521 200353544 -52903039 + AT_rich Low_complexity Low_complexity 1 23 0 839 298 86 26 chr2 200353810 200354465 -52902118 + L1ME2 LINE L1 5257 5950 -214 27 73 0 0 chr2 200354629 200354684 -52901899 + AT_rich Low_complexity Low_complexity 1 55 0 23 0 0 0 chr2 200355007 200355030 -52901553 + AT_rich Low_complexity Low_complexity 1 23 0 282 236 32 146 chr2 200356546 200356669 -52899914 + L2 LINE L2 3171 3279 -34 725 235 246 18 chr2 200358346 200358627 -52897956 - MLT1D LTR MaLR 0 505 161 21 0 0 0 chr2 200358939 200358960 -52897623 + AT_rich Low_complexity Low_complexity 1 21 0 393 285 13 7 chr2 200359001 200359152 -52897431 + L1MC4a LINE L1 3793 3944 -2202 243 218 35 81 chr2 200359255 200359342 -52897241 + L1MC4a LINE L1 4084 4166 -1980 744 300 59 31 chr2 200359406 200359829 -52896754 + L1MC4a LINE L1 5599 6033 -1775 272 190 63 151 chr2 200359820 200360025 -52896558 + L1M4 LINE L1 2919 3105 -3041 * 21 57 0 0 chr2 200360060 200360095 -52896488 + AT_rich Low_complexity Low_complexity 1 35 0 21 71 0 0 chr2 200360449 200360491 -52896092 + AT_rich Low_complexity Low_complexity 1 42 0 21 57 0 0 chr2 200361560 200361595 -52894988 + AT_rich Low_complexity Low_complexity 1 35 0 298 339 59 8 chr2 200362675 200362793 -52893790 + L2 LINE L2 2957 3080 -233 622 164 3 29 chr2 200362793 200362924 -52893659 - L1MC/D LINE L1 -494 5684 5574 2791 230 27 16 chr2 200362926 200363527 -52893056 - L1MC/D LINE L1 -724 5454 4839 2317 80 0 13 chr2 200363527 200363829 -52892754 + AluSq SINE Alu 1 298 -15 2791 230 27 16 chr2 200363829 200364048 -52892535 - L1MC/D LINE L1 -1339 4839 4624 396 269 80 60 chr2 200364431 200364632 -52891951 + L1M4 LINE L1 14 218 -6324 1787 188 32 8 chr2 200364943 200365316 -52891267 + L1MB4 LINE L1 5725 6106 -74 24 32 0 0 chr2 200365502 200365533 -52891050 + AT_rich Low_complexity Low_complexity 1 31 0 203 375 78 16 chr2 200366903 200367031 -52889552 - L2 LINE L2 -4 3268 3133 1971 99 6 78 chr2 200368103 200368435 -52888148 - AluSg SINE Alu -2 308 1 1362 100 0 0 chr2 200369344 200369534 -52887049 + AluSg/x SINE Alu 123 312 0 554 277 26 87 chr2 200369536 200369767 -52886816 - LTR16A LTR ERVL -105 345 129 303 122 0 0 chr2 200371341 200371390 -52885193 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 1481 209 18 4 chr2 200371725 200372002 -52884581 - AluJo SINE Alu -28 284 4 240 35 0 0 chr2 200372349 200372378 -52884205 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 493 243 193 16 chr2 200372378 200372621 -52883962 - L2 LINE L2 -13 3300 3015 346 356 40 13 chr2 200373237 200373386 -52883197 - MER91A DNA MER1_type -43 153 1 837 76 0 0 chr2 200373538 200373656 -52882927 + (TTCC)n Simple_repeat Simple_repeat 1 118 0 488 345 31 28 chr2 200375666 200375921 -52880662 - MIR SINE MIR -6 256 1 282 327 112 27 chr2 200376442 200376665 -52879918 + ERVL LTR ERVL 2283 2524 -3240 5910 155 34 4 chr2 200376875 200377868 -52878715 + Tigger1 DNA MER2_type 1 1023 -1395 722 87 31 79 chr2 200377868 200377995 -52878588 - AluSg/x SINE Alu -18 294 174 431 97 0 0 chr2 200377992 200378054 -52878529 - AluSg/x SINE Alu -74 236 175 * 1637 138 0 4 chr2 200378054 200378293 -52878290 - AluSq SINE Alu -75 238 1 1019 128 13 0 chr2 200378293 200378449 -52878134 + Tigger1 DNA MER2_type 1014 1171 -1247 835 186 149 5 chr2 200378453 200378668 -52877915 + MSTC-int LTR MaLR 1392 1637 -14 2095 166 92 0 chr2 200378680 200379072 -52877511 + MSTC LTR MaLR 1 428 0 4115 126 29 2 chr2 200379072 200379699 -52876884 + Tigger1 DNA MER2_type 1775 2418 0 382 351 85 20 chr2 200380400 200380742 -52875841 + ERVL LTR ERVL 3518 3881 -1883 21 71 0 0 chr2 200381110 200381152 -52875431 + AT_rich Low_complexity Low_complexity 1 42 0 516 280 57 43 chr2 200381227 200381283 -52875300 + ERVL LTR ERVL 4694 4748 -1016 2243 176 39 0 chr2 200381283 200381693 -52874890 - MSTA LTR MaLR 0 428 3 516 280 57 43 chr2 200381693 200381915 -52874668 + ERVL LTR ERVL 4748 4976 -788 207 392 32 32 chr2 200382101 200382226 -52874357 - L2 LINE L2 -1 3312 3188 302 295 118 20 chr2 200382231 200382485 -52874098 + L1ME4a LINE L1 5843 6121 0 508 195 94 39 chr2 200382563 200382691 -52873892 + L2 LINE L2 3179 3313 0 2143 148 22 27 chr2 200385193 200385559 -52871024 + THE1B LTR MaLR 1 364 0 22 56 0 0 chr2 200386607 200386643 -52869940 + AT_rich Low_complexity Low_complexity 1 36 0 239 139 23 0 chr2 200387278 200387321 -52869262 - MIR SINE MIR 0 262 219 755 156 8 0 chr2 200387321 200387443 -52869140 - FLAM_C SINE Alu -20 123 1 24 0 0 0 chr2 200387451 200387475 -52869108 + AT_rich Low_complexity Low_complexity 1 24 0 364 222 0 0 chr2 200389993 200390065 -52866518 - MLT1E2 LTR MaLR -1 625 554 1085 266 108 14 chr2 200390253 200390686 -52865897 + MER90 LTR ERV1 2 475 -139 596 41 31 21 chr2 200390955 200391052 -52865531 + (TAGA)n Simple_repeat Simple_repeat 3 100 0 21 36 0 0 chr2 200391906 200391934 -52864649 + AT_rich Low_complexity Low_complexity 1 28 0 248 273 40 20 chr2 200392242 200392341 -52864242 + MIR SINE MIR 74 174 -88 29 60 0 0 chr2 200392676 200392726 -52863857 + AT_rich Low_complexity Low_complexity 1 50 0 29 28 0 0 chr2 200393159 200393195 -52863388 + AT_rich Low_complexity Low_complexity 1 36 0 22 88 0 0 chr2 200393773 200393830 -52862753 + AT_rich Low_complexity Low_complexity 1 57 0 717 299 25 66 chr2 200394196 200394329 -52862254 - HAL1 LINE L1 -1714 793 656 2122 125 0 0 chr2 200394329 200394624 -52861959 + AluSx SINE Alu 1 295 -17 717 299 25 66 chr2 200394624 200394808 -52861775 - HAL1 LINE L1 -1851 656 489 596 266 0 0 chr2 200395023 200395147 -52861436 + BSR/Beta Satellite Satellite 3 126 -16 1541 172 24 38 chr2 200396825 200397116 -52859467 + AluJb SINE Alu 1 287 -25 29 47 0 0 chr2 200397316 200397359 -52859224 + AT_rich Low_complexity Low_complexity 1 43 0 770 186 64 0 chr2 200397401 200397541 -52859042 + MER2 DNA MER2_type 17 165 -180 766 208 77 0 chr2 200397638 200397806 -52858777 + MER2 DNA MER2_type 165 345 0 459 328 70 5 chr2 200398229 200398430 -52858153 - MIR SINE MIR 0 262 49 235 298 0 0 chr2 200398464 200398511 -52858072 - MIR SINE MIR -208 54 8 275 278 97 0 chr2 200398538 200398610 -52857973 + L2 LINE L2 3232 3310 -3 25 75 0 0 chr2 200398773 200398826 -52857757 + AT_rich Low_complexity Low_complexity 1 53 0 266 188 15 15 chr2 200398919 200399052 -52857531 + (TA)n Simple_repeat Simple_repeat 1 133 0 206 116 23 0 chr2 200399130 200399173 -52857410 + (TA)n Simple_repeat Simple_repeat 2 45 0 431 265 80 40 chr2 200399259 200399584 -52856999 - HAL1 LINE L1 -746 1761 1424 858 246 11 6 chr2 200399711 200399894 -52856689 + MER44D DNA MER2_type 1 184 -521 * 1677 179 3 10 chr2 200399887 200400194 -52856389 + Tigger2 DNA MER2_type 2414 2718 0 1619 185 39 24 chr2 200400194 200400525 -52856058 + MER44D DNA MER2_type 214 604 -1 441 0 0 0 chr2 200400527 200400576 -52856007 + (TG)n Simple_repeat Simple_repeat 1 49 0 24 0 0 0 chr2 200402679 200402703 -52853880 + AT_rich Low_complexity Low_complexity 1 24 0 440 181 12 12 chr2 200402725 200402808 -52853775 - MLT1A2 LTR MaLR -12 362 280 203 290 14 43 chr2 200403240 200403309 -52853274 - L2 LINE L2 -50 3222 3156 1877 92 116 36 chr2 200404596 200404933 -52851650 + THE1B LTR MaLR 1 364 0 22 56 0 0 chr2 200406731 200406767 -52849816 + AT_rich Low_complexity Low_complexity 1 36 0 183 369 101 7 chr2 200408543 200408692 -52847891 + MIR SINE MIR 23 185 -77 389 288 29 43 chr2 200409273 200409412 -52847171 - MIR SINE MIR -125 137 1 6970 31 1 0 chr2 200409623 200410452 -52846131 - L1PA4 LINE L1 -2 6153 5324 1014 231 50 43 chr2 200411739 200412042 -52844541 - MLT1C LTR MaLR -157 310 6 21 36 0 0 chr2 200412607 200412635 -52843948 + AT_rich Low_complexity Low_complexity 1 28 0 32 43 0 0 chr2 200412702 200412748 -52843835 + AT_rich Low_complexity Low_complexity 1 46 0 1272 174 169 54 chr2 200413303 200413653 -52842930 + MLT1B LTR MaLR 1 390 0 2918 231 61 53 chr2 200413660 200413777 -52842806 + L1MC3 LINE L1 6678 6793 -992 1778 174 83 9 chr2 200413777 200414116 -52842467 - THE1B LTR MaLR 0 364 1 2918 231 61 53 chr2 200414116 200414747 -52841836 + L1MC3 LINE L1 6793 7440 -345 1518 111 43 82 chr2 200414747 200415026 -52841557 + AluSx SINE Alu 1 268 -44 2918 231 61 53 chr2 200415026 200415374 -52841209 + L1MC3 LINE L1 7440 7784 -1 1703 205 99 34 chr2 200415972 200416446 -52840137 + MLT1D LTR MaLR 1 505 0 217 263 0 18 chr2 200416974 200417031 -52839552 + GA-rich Low_complexity Low_complexity 4 59 0 256 274 96 0 chr2 200417197 200417270 -52839313 - MLT1L LTR MaLR -82 533 454 657 294 103 56 chr2 200417484 200417892 -52838691 + MLT1F LTR MaLR 40 466 -76 26 30 0 0 chr2 200418553 200418586 -52837997 + AT_rich Low_complexity Low_complexity 1 33 0 362 333 122 26 chr2 200418820 200419237 -52837346 + L1M4 LINE L1 3629 4085 -2061 304 256 47 23 chr2 200419600 200419686 -52836897 - L1MC4 LINE L1 -1341 6701 6614 622 173 11 43 chr2 200419716 200419901 -52836682 + (CATATA)n Simple_repeat Simple_repeat 2 180 0 222 222 0 0 chr2 200419914 200419968 -52836615 + (CATATA)n Simple_repeat Simple_repeat 4 57 0 243 250 0 31 chr2 200419968 200420032 -52836551 + L1MD3 LINE L1 6607 6668 -1327 225 300 0 0 chr2 200420032 200420092 -52836491 + L1MD3 LINE L1 6609 6668 -1327 238 253 0 22 chr2 200420094 200420185 -52836398 + (CATATA)n Simple_repeat Simple_repeat 2 90 0 246 289 72 0 chr2 200420195 200420278 -52836305 + L1MC4 LINE L1 6615 6703 -1339 264 296 0 0 chr2 200420285 200420393 -52836190 + (CATATA)n Simple_repeat Simple_repeat 3 110 0 239 245 0 64 chr2 200420401 200420495 -52836088 + L1MC4 LINE L1 6615 6702 -1340 * 257 318 0 0 chr2 200420473 200420561 -52836022 - L1MC4 LINE L1 -1340 6702 6615 235 310 23 0 chr2 200420510 200420597 -52835986 + L1MC4 LINE L1 6614 6702 -1340 * 257 318 0 0 chr2 200420575 200420663 -52835920 - L1MC4 LINE L1 -1340 6702 6615 211 250 0 0 chr2 200420667 200420711 -52835872 + (TA)n Simple_repeat Simple_repeat 1 44 0 232 289 24 0 chr2 200420713 200420796 -52835787 - L1MC4 LINE L1 -1344 6698 6614 * 237 258 21 65 chr2 200420756 200420849 -52835734 + L1MC4 LINE L1 6614 6702 -1340 299 295 26 0 chr2 200420849 200420927 -52835656 + (CATATA)n Simple_repeat Simple_repeat 1 80 0 240 281 49 0 chr2 200420929 200421011 -52835572 - L1MC4 LINE L1 -1344 6698 6613 4172 196 48 13 chr2 200421174 200422298 -52834285 + L1MD1 LINE L1 5049 6210 -32 23 33 0 0 chr2 200422309 200422339 -52834244 + AT_rich Low_complexity Low_complexity 1 30 0 1506 134 214 22 chr2 200423311 200423670 -52832913 - MSTA LTR MaLR 0 428 1 228 86 0 0 chr2 200423731 200423766 -52832817 + (TC)n Simple_repeat Simple_repeat 1 35 0 903 213 124 48 chr2 200424166 200424537 -52832046 + LTR37A LTR ERV1 26 424 -2 1173 233 126 17 chr2 200424644 200424985 -52831598 + L1ME2 LINE L1 5471 5868 -296 480 48 0 0 chr2 200424985 200425048 -52831535 + (CA)n Simple_repeat Simple_repeat 2 64 0 1173 233 126 17 chr2 200425048 200425127 -52831456 + L1ME2 LINE L1 5868 5937 -227 1249 240 29 0 chr2 200426469 200426748 -52829835 + AluJo SINE Alu 12 298 -14 922 262 58 55 chr2 200427139 200427555 -52829028 + L1MC4 LINE L1 6716 7132 -910 739 196 47 26 chr2 200427732 200427973 -52828610 - LTR45 LTR ERV1 0 525 239 278 271 42 21 chr2 200428229 200428325 -52828258 - LTR45 LTR ERV1 -427 98 1 189 0 0 0 chr2 200428795 200428816 -52827767 + (CA)n Simple_repeat Simple_repeat 1 21 0 593 279 28 12 chr2 200430972 200431223 -52825360 + L1MC4a LINE L1 7161 7415 -393 315 290 214 7 chr2 200431355 200431500 -52825083 + MER5A DNA MER1_type 13 187 -2 358 280 104 16 chr2 200431754 200431947 -52824636 + L1MC4 LINE L1 7817 8026 -16 21 82 0 0 chr2 200432503 200432552 -52824031 + AT_rich Low_complexity Low_complexity 1 49 0 3151 134 11 128 chr2 200432777 200433495 -52823088 + MER51A LTR ERV1 1 634 0 2733 179 34 31 chr2 200433555 200434107 -52822476 - MLT2B3 LTR ERVL 0 554 1 1293 295 81 28 chr2 200434733 200435373 -52821210 + MER20B DNA MER1_type 77 750 -33 344 328 108 5 chr2 200435449 200435653 -52820930 + MIR SINE MIR 34 258 -4 26 50 0 0 chr2 200435659 200435699 -52820884 + AT_rich Low_complexity Low_complexity 1 40 0 207 0 0 0 chr2 200435759 200435782 -52820801 + (CA)n Simple_repeat Simple_repeat 2 24 0 201 222 16 16 chr2 200436357 200436420 -52820163 + (TAA)n Simple_repeat Simple_repeat 3 65 0 282 319 150 0 chr2 200438367 200438480 -52818103 - MIR SINE MIR -62 146 17 189 121 17 35 chr2 200438939 200438997 -52817586 + A-rich Low_complexity Low_complexity 3 59 0 639 343 68 41 chr2 200439374 200439768 -52816815 + L2 LINE L2 2905 3309 -4 216 275 104 37 chr2 200439939 200440059 -52816524 - MIR SINE MIR -67 141 16 264 30 0 0 chr2 200441527 200441560 -52815023 + (CA)n Simple_repeat Simple_repeat 2 34 0 4024 144 79 39 chr2 200441602 200442615 -52813968 + MER11B LTR ERVK 1 1179 -87 309 24 0 0 chr2 200442908 200442949 -52813634 + L1PA6 LINE L1 6110 6150 -4 303 28 0 0 chr2 200443441 200443477 -52813106 + (TG)n Simple_repeat Simple_repeat 2 37 0 284 83 21 0 chr2 200445216 200445264 -52811319 + (TG)n Simple_repeat Simple_repeat 2 50 0 637 290 71 34 chr2 200446426 200446750 -52809833 + L2 LINE L2 560 895 -2419 2246 147 39 7 chr2 200446753 200447182 -52809401 + MER61C LTR ERV1 4 434 0 402 281 290 5 chr2 200447216 200447433 -52809150 + L2 LINE L2 933 1211 -2103 3331 138 111 0 chr2 200447440 200447991 -52808592 - LTR9 LTR ERV1 0 612 1 355 258 65 63 chr2 200448027 200448271 -52808312 + L2 LINE L2 1737 1948 -1366 345 372 58 29 chr2 200448271 200448478 -52808105 + L2 LINE L2 2764 2976 -338 1512 172 42 14 chr2 200448874 200449159 -52807424 + AluJb SINE Alu 11 303 -9 507 273 27 107 chr2 200449462 200449836 -52806747 - L1MC3 LINE L1 -1408 6377 6034 373 237 59 101 chr2 200449835 200450182 -52806401 - L1M4 LINE L1 -2828 3318 2972 * 525 246 56 91 chr2 200450182 200450341 -52806242 - L1MC5 LINE L1 -1105 6856 6693 883 198 0 0 chr2 200450341 200450503 -52806080 - FRAM SINE Alu -4 162 1 525 246 56 91 chr2 200450503 200450575 -52806008 - L1MC5 LINE L1 -1268 6693 2947 207 143 48 0 chr2 200450623 200450665 -52805918 + (TAGA)n Simple_repeat Simple_repeat 1 44 0 27 81 0 0 chr2 200450947 200451009 -52805574 + AT_rich Low_complexity Low_complexity 1 62 0 2209 108 0 3 chr2 200451179 200451475 -52805108 - AluSq SINE Alu -18 295 1 287 325 108 18 chr2 200451897 200452229 -52804354 - HAL1b LINE L1 -606 742 381 22 35 0 0 chr2 200452567 200452596 -52803987 + AT_rich Low_complexity Low_complexity 1 29 0 482 70 14 0 chr2 200452770 200452841 -52803742 + (TA)n Simple_repeat Simple_repeat 1 72 0 200 294 79 63 chr2 200453335 200453461 -52803122 - MIR SINE MIR -71 191 64 372 276 69 14 chr2 200453532 200453677 -52802906 - MIR SINE MIR -15 247 95 2368 53 0 7 chr2 200453684 200453988 -52802595 - AluY SINE Alu -9 302 1 500 188 0 0 chr2 200454360 200454440 -52802143 + FLAM SINE Alu 40 119 -24 23 0 0 0 chr2 200454458 200454481 -52802102 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr2 200454603 200454632 -52801951 + AT_rich Low_complexity Low_complexity 1 29 0 197 291 0 18 chr2 200454852 200454907 -52801676 + L2 LINE L2 3219 3272 0 258 32 0 0 chr2 200455819 200455850 -52800733 + (CA)n Simple_repeat Simple_repeat 2 32 0 295 326 61 7 chr2 200455873 200456020 -52800563 - MIR SINE MIR -43 219 65 22 0 0 0 chr2 200456832 200456854 -52799729 + AT_rich Low_complexity Low_complexity 1 22 0 218 182 0 0 chr2 200458123 200458167 -52798416 + (TG)n Simple_repeat Simple_repeat 1 44 0 1123 250 135 17 chr2 200459333 200459814 -52796769 - L1ME3A LINE L1 -9 6161 5616 326 225 34 4 chr2 200459819 200459926 -52796657 - L1M3d LINE L1 -4753 1383 1038 1489 242 110 2 chr2 200460094 200460548 -52796035 - L1MEc LINE L1 -5476 920 418 23 0 0 0 chr2 200461078 200461101 -52795482 + AT_rich Low_complexity Low_complexity 1 23 0 1721 210 103 29 chr2 200461714 200462472 -52794111 - SATR1 Satellite Satellite -20 813 1 221 206 11 67 chr2 200462473 200462653 -52793930 + (TTA)n Simple_repeat Simple_repeat 1 170 0 428 215 6 37 chr2 200462687 200462850 -52793733 + (TTA)n Simple_repeat Simple_repeat 3 160 0 1908 191 106 23 chr2 200462851 200464164 -52792419 - SATR1 Satellite Satellite -1 1421 1 181 311 89 0 chr2 200464245 200464335 -52792248 + MIR SINE MIR 94 191 -71 24 67 0 0 chr2 200464959 200465004 -52791579 + AT_rich Low_complexity Low_complexity 1 45 0 540 301 46 8 chr2 200465727 200465947 -52790636 + MIR SINE MIR 36 262 0 205 327 166 22 chr2 200466463 200466686 -52789897 - L2 LINE L2 -422 2892 2638 284 303 69 48 chr2 200466740 200466885 -52789698 - L2 LINE L2 -842 2472 2325 1246 274 79 30 chr2 200466966 200467433 -52789150 - LTR40a LTR ERVL 0 519 30 2091 119 3 0 chr2 200467838 200468165 -52788418 + AluY SINE Alu 1 328 0 508 195 18 92 chr2 200469337 200469501 -52787082 - L1MC3 LINE L1 -1 7784 7633 228 150 25 0 chr2 200469527 200469567 -52787016 - MLT2B1 LTR ERVL -8 456 416 214 302 0 0 chr2 200469568 200469621 -52786962 + (CA)n Simple_repeat Simple_repeat 2 54 0 228 67 0 0 chr2 200469627 200469657 -52786926 + (TG)n Simple_repeat Simple_repeat 1 30 0 234 91 0 0 chr2 200469657 200469690 -52786893 + (GA)n Simple_repeat Simple_repeat 1 33 0 1292 232 40 112 chr2 200469691 200470191 -52786392 - MLT2B1 LTR ERVL -56 464 1 6333 221 61 31 chr2 200470192 200470751 -52785832 - L1MC3 LINE L1 -192 7593 7053 1938 139 78 23 chr2 200470751 200471096 -52785487 - THE1B LTR MaLR 0 364 1 6333 221 61 31 chr2 200471096 200472233 -52784350 - L1MC3 LINE L1 -732 7053 5845 2501 276 53 28 chr2 200472231 200473774 -52782809 - L1MCa LINE L1 -3980 2765 951 * 644 261 53 21 chr2 200473786 200474012 -52782571 - L1MCa LINE L1 -5836 345 6 21 82 0 0 chr2 200474022 200474071 -52782512 + AT_rich Low_complexity Low_complexity 1 49 0 183 100 0 0 chr2 200474326 200474356 -52782227 + (T)n Simple_repeat Simple_repeat 1 30 0 1257 65 12 0 chr2 200474364 200474532 -52782051 - L1PA3 LINE L1 -3 6152 5983 206 326 0 0 chr2 200474722 200474817 -52781766 + T-rich Low_complexity Low_complexity 1 95 0 182 480 8 8 chr2 200475150 200475273 -52781310 + L2 LINE L2 2943 3065 -207 26 30 0 0 chr2 200475351 200475384 -52781199 + AT_rich Low_complexity Low_complexity 1 33 0 641 228 0 8 chr2 200476133 200476260 -52780323 - FLAM_A SINE Alu -7 126 1 213 214 0 0 chr2 200476846 200476888 -52779695 + (CA)n Simple_repeat Simple_repeat 1 42 0 215 317 134 12 chr2 200477493 200477657 -52778926 + MIR SINE MIR 79 262 0 231 285 131 15 chr2 200478622 200478752 -52777831 + MIR SINE MIR 88 232 -30 26 74 0 0 chr2 200479393 200479447 -52777136 + AT_rich Low_complexity Low_complexity 1 54 0 28 29 0 0 chr2 200479505 200479540 -52777043 + AT_rich Low_complexity Low_complexity 1 35 0 1840 141 6 31 chr2 200480566 200480886 -52775697 + AluSq SINE Alu 2 313 0 383 191 36 0 chr2 200482168 200482252 -52774331 + L1MC4 LINE L1 7956 8042 0 395 337 56 0 chr2 200482385 200482563 -52774020 + MIR SINE MIR 49 236 -26 189 0 0 0 chr2 200482805 200482826 -52773757 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 210 368 60 8 chr2 200482966 200483083 -52773500 + L3b LINE CR1 1461 1583 0 21 0 0 0 chr2 200483301 200483322 -52773261 + AT_rich Low_complexity Low_complexity 1 21 0 21 71 0 0 chr2 200483589 200483631 -52772952 + AT_rich Low_complexity Low_complexity 1 42 0 1957 256 35 20 chr2 200484587 200485094 -52771489 + MLT2B2 LTR ERVL 1 515 0 192 125 0 0 chr2 200485318 200485350 -52771233 + (GA)n Simple_repeat Simple_repeat 1 32 0 2130 230 48 2 chr2 200485388 200485871 -52770712 - MLT1D LTR MaLR 0 505 1 943 261 38 79 chr2 200486253 200486644 -52769939 + MLT1E LTR MaLR 7 381 -212 483 98 20 39 chr2 200486679 200486781 -52769802 + (TTCCC)n Simple_repeat Simple_repeat 3 102 0 1961 136 13 7 chr2 200486787 200487095 -52769488 - AluSx SINE Alu 0 312 3 191 364 64 21 chr2 200487121 200487261 -52769322 - MIR SINE MIR -68 194 49 632 218 8 0 chr2 200487383 200487516 -52769067 + FLAM_A SINE Alu 9 142 0 520 306 7 14 chr2 200487522 200487666 -52768917 - MLT1H1 LTR MaLR -370 185 43 2265 77 0 0 chr2 200487932 200488230 -52768353 - AluY SINE Alu 0 311 14 42 36 0 0 chr2 200488529 200488585 -52767998 + AT_rich Low_complexity Low_complexity 1 56 0 541 186 37 75 chr2 200488608 200488769 -52767814 - L1ME2 LINE L1 -13 6151 5997 1154 271 66 47 chr2 200489291 200489763 -52766820 - MLT1H1 LTR MaLR 0 555 75 1205 289 64 55 chr2 200490075 200490652 -52765931 - MLT1E LTR MaLR -2 591 10 180 0 0 0 chr2 200490665 200490685 -52765898 + (CATTT)n Simple_repeat Simple_repeat 1 20 0 32 67 0 0 chr2 200490825 200490885 -52765698 + AT_rich Low_complexity Low_complexity 1 60 0 3733 154 36 34 chr2 200490974 200491758 -52764825 + L1MC1 LINE L1 5549 6333 0 20329 177 21 27 chr2 200492212 200497307 -52759276 - L1 LINE L1 -2470 5095 16 1745 213 36 0 chr2 200497306 200497448 -52759135 + L1MA8 LINE L1 4845 4980 -1166 * 2041 113 17 7 chr2 200497448 200497749 -52758834 + AluSq SINE Alu 1 304 -9 1745 213 36 0 chr2 200497749 200497991 -52758592 + L1MA8 LINE L1 4980 5243 -903 2999 183 18 22 chr2 200497991 200498615 -52757968 + L1MA8 LINE L1 5664 6287 -4 29 0 0 0 chr2 200500436 200500465 -52756118 + AT_rich Low_complexity Low_complexity 1 29 0 380 323 171 23 chr2 200500669 200501056 -52755527 + L2 LINE L2 2029 2472 -842 556 118 0 35 chr2 200501306 200501391 -52755192 - MSTD LTR MaLR -314 82 1 365 197 0 0 chr2 200501392 200501468 -52755115 + L1MB3 LINE L1 2310 2385 -3761 2485 56 0 3 chr2 200501661 200501966 -52754617 - AluY SINE Alu -7 304 1 522 254 0 0 chr2 200502022 200502164 -52754419 + L1MB3 LINE L1 2580 2721 -3425 3046 202 15 11 chr2 200502164 200502833 -52753750 + L1MB3 LINE L1 5507 6178 -5 1332 175 31 0 chr2 200502908 200503194 -52753389 - L1MA8 LINE L1 -6 6285 5991 22 0 0 0 chr2 200503446 200503468 -52753115 + AT_rich Low_complexity Low_complexity 1 22 0 24 53 0 0 chr2 200503554 200503592 -52752991 + AT_rich Low_complexity Low_complexity 1 38 0 197 269 15 45 chr2 200504105 200504172 -52752411 + MIR SINE MIR 75 139 -123 345 329 15 15 chr2 200504364 200504501 -52752082 - MIR SINE MIR 0 262 126 22 0 0 0 chr2 200505077 200505099 -52751484 + AT_rich Low_complexity Low_complexity 1 22 0 1697 202 19 50 chr2 200505167 200505543 -52751040 + MSTB LTR MaLR 63 426 0 1029 296 34 38 chr2 200505913 200506364 -52750219 - MLT1G LTR MaLR 0 590 125 254 255 0 0 chr2 200506413 200506460 -52750123 - MER5A DNA MER1_type -32 157 111 349 215 13 13 chr2 200506473 200506552 -52750031 - MLT1G LTR MaLR -501 89 11 2137 110 0 3 chr2 200507941 200508233 -52748350 - AluSg SINE Alu -19 291 1 616 270 20 0 chr2 200508462 200508610 -52747973 - MER5A DNA MER1_type -32 157 7 389 327 47 20 chr2 200508633 200508887 -52747696 - L1MDb LINE L1 -5011 1576 1316 1343 158 59 4 chr2 200508918 200509172 -52747411 - L1PA16 LINE L1 -2 6164 5897 21 0 0 0 chr2 200509311 200509332 -52747251 + AT_rich Low_complexity Low_complexity 1 21 0 26 30 0 0 chr2 200510169 200510202 -52746381 + AT_rich Low_complexity Low_complexity 1 33 0 262 304 116 41 chr2 200510250 200510612 -52745971 + L1M4 LINE L1 3964 4352 -1794 535 287 23 23 chr2 200513974 200514239 -52742344 - L1ME LINE L1 -3038 3042 2778 661 277 102 79 chr2 200514284 200514832 -52741751 - L1ME LINE L1 -4114 2147 1613 2088 116 3 7 chr2 200514832 200515154 -52741429 - AluSc SINE Alu 0 309 1 661 277 102 79 chr2 200515154 200516133 -52740450 - L1ME LINE L1 -4648 1613 523 431 256 20 36 chr2 200516619 200516814 -52739769 - L1M4 LINE L1 -2206 3940 3749 1231 323 34 14 chr2 200516859 200517130 -52739453 + L1MEc LINE L1 534 798 -5598 2844 6 0 0 chr2 200517130 200517441 -52739142 + AluYb8 SINE Alu 1 311 -7 1231 323 34 14 chr2 200517441 200517816 -52738767 + L1MEc LINE L1 798 1193 -5203 8716 162 27 7 chr2 200517942 200519426 -52737157 + Tigger4(Zombi) DNA MER2_type 11 1523 -1208 335 299 58 15 chr2 200519598 200519735 -52736848 - L1MDb LINE L1 -5147 1262 1120 250 308 36 28 chr2 200520663 200520858 -52735725 + MIR SINE MIR 15 260 -2 21 36 0 0 chr2 200521261 200521289 -52735294 + AT_rich Low_complexity Low_complexity 1 28 0 39 22 0 0 chr2 200522240 200522286 -52734297 + AT_rich Low_complexity Low_complexity 1 46 0 459 263 92 7 chr2 200522418 200522570 -52734013 + MER58B DNA MER1_type 177 341 0 599 0 14 0 chr2 200523491 200523562 -52733021 + (TAGA)n Simple_repeat Simple_repeat 1 72 0 248 200 15 0 chr2 200523563 200523628 -52732955 + (TA)n Simple_repeat Simple_repeat 2 67 0 230 339 26 35 chr2 200523667 200523782 -52732801 - L2 LINE L2 0 3313 3200 1479 197 4 0 chr2 200524487 200524761 -52731822 - AluJo SINE Alu -26 286 12 228 308 32 11 chr2 200525131 200525316 -52731267 - L1ME LINE L1 -224 5897 5709 1267 176 60 81 chr2 200525602 200525983 -52730600 + THE1C LTR MaLR 1 373 -2 5853 264 59 49 chr2 200526035 200527600 -52728983 + L1M2 LINE L1 10 1606 -5243 2265 112 0 0 chr2 200527600 200527905 -52728678 + AluSx SINE Alu 1 305 -7 5853 264 59 49 chr2 200527905 200528563 -52728020 + L1M2 LINE L1 1606 2256 -4593 2190 180 91 38 chr2 200528691 200530402 -52726181 - SATR1 Satellite Satellite 0 1801 1 2185 157 104 1 chr2 200530432 200530887 -52725696 - SATR1 Satellite Satellite 0 501 1 26472 114 5 17 chr2 200530989 200536334 -52720249 - L1P3 LINE L1 -1131 5330 1 182 298 0 18 chr2 200538646 200538703 -52717880 - L2 LINE L2 -3 3310 3255 1972 145 0 7 chr2 200538802 200539106 -52717477 + AluSx SINE Alu 1 302 -10 250 370 10 0 chr2 200539141 200539241 -52717342 - L2 LINE L2 -300 2972 2872 180 204 0 91 chr2 200539600 200539644 -52716939 - L2 LINE L2 -2948 366 327 505 205 25 57 chr2 200540759 200540881 -52715702 - FLAM_C SINE Alu -15 118 1 290 138 17 0 chr2 200541204 200541262 -52715321 + CT-rich Low_complexity Low_complexity 2 60 0 396 0 0 0 chr2 200541380 200541424 -52715159 + (TG)n Simple_repeat Simple_repeat 1 44 0 215 224 0 20 chr2 200542222 200542271 -52714312 + CT-rich Low_complexity Low_complexity 1 48 0 688 352 77 44 chr2 200542494 200543273 -52713310 + L2 LINE L2 296 1100 -2214 376 161 18 95 chr2 200543466 200543612 -52712971 + MER89 LTR ERV1 1 232 -327 704 247 71 44 chr2 200543794 200544090 -52712493 + MER89-int LTR ERV1 52 355 -6446 754 239 118 110 chr2 200544119 200544383 -52712200 + MER89-int LTR ERV1 427 687 -6114 189 94 0 0 chr2 200544383 200544415 -52712168 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 754 239 118 110 chr2 200544415 200544669 -52711914 + MER89-int LTR ERV1 687 949 -5852 * 1727 216 36 18 chr2 200544657 200545046 -52711537 + MER89-int LTR ERV1 3291 3686 -3115 642 238 39 19 chr2 200545046 200545252 -52711331 - L1ME1 LINE L1 -247 5919 5710 * 1539 261 113 45 chr2 200545247 200545688 -52710895 + L1MD2 LINE L1 5659 6069 -290 198 0 0 0 chr2 200545688 200545710 -52710873 + (CA)n Simple_repeat Simple_repeat 1 22 0 1539 261 113 45 chr2 200545710 200545749 -52710834 + L1MD2 LINE L1 6069 6104 -255 1113 223 18 94 chr2 200545749 200546144 -52710439 - MLT1A1 LTR MaLR 0 365 1 1539 261 113 45 chr2 200546144 200546302 -52710281 + L1MD2 LINE L1 6104 6341 -18 28 48 0 0 chr2 200546307 200546349 -52710234 + AT_rich Low_complexity Low_complexity 1 42 0 555 349 42 16 chr2 200546403 200546710 -52709873 + LTR16A LTR ERVL 46 360 -90 213 39 0 0 chr2 200546983 200547009 -52709574 + (TA)n Simple_repeat Simple_repeat 2 27 0 216 202 60 12 chr2 200547023 200547107 -52709476 + (TTATA)n Simple_repeat Simple_repeat 2 89 0 2641 75 97 12 chr2 200547109 200547522 -52709061 - LTR7 LTR ERV1 -2 448 1 1951 110 52 15 chr2 200547522 200547848 -52708735 - HERVH LTR ERV1 0 7713 7376 248 333 33 46 chr2 200548539 200548692 -52707891 + L2 LINE L2 3162 3312 -1 9015 226 33 31 chr2 200548836 200551676 -52704907 - L1MC3 LINE L1 -70 8133 4840 234 0 0 0 chr2 200551677 200551703 -52704880 + (TG)n Simple_repeat Simple_repeat 2 27 0 968 238 28 62 chr2 200551753 200552043 -52704540 - MLT1D LTR MaLR -223 282 3 884 284 46 26 chr2 200552044 200552389 -52704194 - L1MC3 LINE L1 -1839 4725 4374 769 241 110 51 chr2 200552407 200552644 -52703939 + MLT1D LTR MaLR 252 502 -3 2888 245 103 29 chr2 200552649 200553083 -52703500 - L1MC3 LINE L1 -2650 3914 3514 865 173 0 12 chr2 200553083 200553251 -52703332 + L1PA16 LINE L1 5990 6155 -11 2888 245 103 29 chr2 200553251 200554291 -52702292 - L1MC3 LINE L1 -3050 3514 2553 2149 107 0 7 chr2 200554291 200554591 -52701992 - AluSx SINE Alu -13 299 2 2888 245 103 29 chr2 200554591 200555216 -52701367 - L1MC3 LINE L1 -4011 2553 1976 1617 223 13 21 chr2 200555216 200555593 -52700990 + MLT1A2 LTR MaLR 1 374 0 2888 245 103 29 chr2 200555593 200555762 -52700821 - L1MC3 LINE L1 -4588 1976 1821 2305 108 0 0 chr2 200555762 200556069 -52700514 - AluSg SINE Alu -3 307 1 2888 245 103 29 chr2 200556069 200556842 -52699741 - L1MC3 LINE L1 -4743 1821 520 550 221 67 132 chr2 200556950 200557074 -52699509 - MLT1C LTR MaLR -2 465 335 3689 158 6 2 chr2 200557074 200557705 -52698878 - MER41B LTR ERV1 -1 634 1 550 221 67 132 chr2 200557705 200557983 -52698600 - MLT1C LTR MaLR -132 335 12 21 82 0 0 chr2 200558100 200558149 -52698434 + AT_rich Low_complexity Low_complexity 1 49 0 494 315 40 22 chr2 200558252 200558576 -52698007 + L1ME LINE L1 5256 5585 -579 28 48 0 0 chr2 200558855 200558897 -52697686 + AT_rich Low_complexity Low_complexity 1 42 0 28 61 0 0 chr2 200559219 200559268 -52697315 + AT_rich Low_complexity Low_complexity 1 49 0 866 300 66 11 chr2 200559676 200560133 -52696450 + HAL1b LINE L1 322 803 -545 21 0 0 0 chr2 200561119 200561140 -52695443 + AT_rich Low_complexity Low_complexity 1 21 0 481 190 0 0 chr2 200562530 200562609 -52693974 - Tigger5 DNA MER2_type -2244 79 1 266 191 9 38 chr2 200563028 200563133 -52693450 + CT-rich Low_complexity Low_complexity 6 107 0 484 258 7 0 chr2 200563407 200563558 -52693025 + L1MEc LINE L1 726 877 -5519 517 330 33 8 chr2 200563596 200563990 -52692593 + L1MEc LINE L1 1068 1471 -4925 225 0 0 0 chr2 200563990 200564015 -52692568 + (CA)n Simple_repeat Simple_repeat 2 26 0 650 273 125 17 chr2 200564034 200564379 -52692204 + L1MEc LINE L1 1680 2061 -4335 3624 175 15 52 chr2 200564380 200564681 -52691902 + LTR1 LTR ERV1 1 312 -473 1975 90 8 15 chr2 200564681 200564949 -52691634 + AluSx SINE Alu 30 295 -17 3624 175 15 52 chr2 200564949 200565448 -52691135 + LTR1 LTR ERV1 312 771 -14 704 189 57 43 chr2 200565471 200565736 -52690847 + L1MEc LINE L1 2066 2292 -3923 342 245 10 20 chr2 200565770 200565872 -52690711 + L1MEc LINE L1 3571 3671 -2544 26 64 0 0 chr2 200565879 200565926 -52690657 + AT_rich Low_complexity Low_complexity 1 47 0 2260 100 3 0 chr2 200565937 200566238 -52690345 + AluSp SINE Alu 1 302 -11 481 309 133 5 chr2 200566389 200566599 -52689984 + MIR SINE MIR 2 238 -24 23 0 0 0 chr2 200567143 200567166 -52689417 + AT_rich Low_complexity Low_complexity 1 23 0 1762 118 8 8 chr2 200567738 200567993 -52688590 + AluSc SINE Alu 1 255 -54 373 265 48 14 chr2 200572608 200572755 -52683828 - MLT1H LTR MaLR -2 547 396 21 0 0 0 chr2 200573024 200573045 -52683538 + AT_rich Low_complexity Low_complexity 1 21 0 194 360 79 7 chr2 200573422 200573561 -52683022 - L2 LINE L2 0 3313 3165 7127 87 4 20 chr2 200574401 200575386 -52681197 + LTR5 LTR ERVK 1 969 0 2139 100 10 7 chr2 200576361 200576652 -52679931 - AluSg SINE Alu -16 294 3 261 232 24 61 chr2 200577260 200577342 -52679241 + MER8 DNA MER2_type 2 80 -159 * 818 234 35 20 chr2 200577336 200577533 -52679050 + MER8 DNA MER2_type 40 239 0 249 362 9 0 chr2 200579090 200579206 -52677377 - Charlie8 DNA MER1_type -2218 199 83 28 48 0 0 chr2 200580388 200580430 -52676153 + AT_rich Low_complexity Low_complexity 1 42 0 24 85 0 0 chr2 200580690 200580749 -52675834 + AT_rich Low_complexity Low_complexity 1 59 0 770 162 73 34 chr2 200581877 200582081 -52674502 - L1MA7 LINE L1 -1 6290 6079 * 1496 149 31 0 chr2 200582066 200582327 -52674256 + L1MA7 LINE L1 5711 5979 -312 276 399 7 29 chr2 200582346 200582484 -52674099 - L2 LINE L2 -224 3048 2914 209 297 10 50 chr2 200582590 200582691 -52673892 + MER91C DNA MER1_type 31 127 -13 195 371 72 10 chr2 200583502 200583599 -52672984 - L2 LINE L2 -33 3239 3137 2356 79 0 0 chr2 200584206 200584510 -52672073 - AluY SINE Alu -7 304 1 1427 179 16 51 chr2 200585412 200585725 -52670858 - AluSx SINE Alu -10 302 1 508 256 70 97 chr2 200585806 200586245 -52670338 - MLT1H LTR MaLR -2 547 42 22 70 0 0 chr2 200587426 200587469 -52669114 + AT_rich Low_complexity Low_complexity 1 43 0 23 0 0 0 chr2 200588257 200588280 -52668303 + AT_rich Low_complexity Low_complexity 1 23 0 729 278 63 68 chr2 200588570 200589139 -52667444 + L1MCb LINE L1 3 568 -5477 1647 224 48 2 chr2 200589264 200589679 -52666904 - L1 LINE L1 -1518 4628 4195 738 189 76 5 chr2 200589698 200589883 -52666700 + L1 LINE L1 3760 3957 -2189 21 36 0 0 chr2 200589889 200589917 -52666666 + AT_rich Low_complexity Low_complexity 1 28 0 1666 232 32 42 chr2 200590097 200590602 -52665981 + MLT1D LTR MaLR 3 502 -3 386 307 26 53 chr2 200593349 200593538 -52663045 - MLT1I LTR MaLR -167 242 59 305 286 171 9 chr2 200593784 200593889 -52662694 + L2 LINE L2 3182 3303 -10 884 271 136 62 chr2 200594248 200594843 -52661740 - L1ME3A LINE L1 -27 6143 5505 387 289 102 21 chr2 200594887 200595074 -52661509 - MLT1H LTR MaLR -2 547 346 349 333 23 8 chr2 200595074 200595206 -52661377 - MLT1H LTR MaLR -411 138 5 516 278 114 48 chr2 200595217 200596397 -52660186 - L1ME3A LINE L1 -726 5444 4181 27 0 0 0 chr2 200596714 200596741 -52659842 + AT_rich Low_complexity Low_complexity 1 27 0 286 289 120 63 chr2 200597242 200597384 -52659199 - MIR SINE MIR -68 194 45 28 29 0 0 chr2 200597460 200597495 -52659088 + AT_rich Low_complexity Low_complexity 1 35 0 218 250 28 0 chr2 200597799 200597871 -52658712 + (TA)n Simple_repeat Simple_repeat 2 75 0 22 35 0 0 chr2 200598597 200598626 -52657957 + AT_rich Low_complexity Low_complexity 1 29 0 240 263 13 0 chr2 200599424 200599500 -52657083 + (TTG)n Simple_repeat Simple_repeat 2 78 0 23 0 0 0 chr2 200599855 200599878 -52656705 + AT_rich Low_complexity Low_complexity 1 23 0 27 29 0 0 chr2 200599941 200599975 -52656608 + AT_rich Low_complexity Low_complexity 1 34 0 28 29 0 0 chr2 200600072 200600107 -52656476 + AT_rich Low_complexity Low_complexity 1 35 0 28 48 0 0 chr2 200600424 200600466 -52656117 + AT_rich Low_complexity Low_complexity 1 42 0 512 318 41 9 chr2 200600545 200600765 -52655818 + L1MDa LINE L1 362 588 -6133 304 281 173 32 chr2 200600824 200601009 -52655574 + L1MDa LINE L1 959 1169 -5552 263 319 77 37 chr2 200601189 200601487 -52655096 + L1MC3 LINE L1 110 419 -6004 273 314 0 20 chr2 200601703 200601805 -52654778 + L1MC3 LINE L1 817 916 -5507 1614 277 107 34 chr2 200601933 200603119 -52653464 + L1MC3 LINE L1 1119 2217 -4724 1243 218 29 82 chr2 200603119 200603531 -52653052 - MLT1B LTR MaLR 0 390 1 1614 277 107 34 chr2 200603531 200604489 -52652094 + L1MC3 LINE L1 2217 3620 -3321 * 2481 254 63 39 chr2 200604483 200606184 -52650399 + L1MC3 LINE L1 5183 6192 -749 1127 231 95 16 chr2 200606212 200606888 -52649695 + L1MDa LINE L1 2206 2944 -3596 572 303 21 4 chr2 200606898 200607139 -52649444 + L1MDa LINE L1 3764 4008 -2532 337 269 45 30 chr2 200607176 200607377 -52649206 + L1MDa LINE L1 4137 4340 -2200 593 303 37 11 chr2 200607466 200607654 -52648929 - MIR SINE MIR -21 241 49 23 0 0 0 chr2 200607792 200607815 -52648768 + AT_rich Low_complexity Low_complexity 1 23 0 1427 94 0 0 chr2 200608661 200608842 -52647741 - AluSg SINE Alu -129 181 1 484 213 70 27 chr2 200608845 200609046 -52647537 - LTR25 LTR ERV1 -98 684 197 276 200 138 0 chr2 200609088 200609153 -52647430 - MER51A LTR ERV1 -353 281 208 470 170 42 0 chr2 200609326 200609436 -52647147 - MER61E LTR ERV1 -484 85 1 287 333 0 0 chr2 200609436 200609502 -52647081 - MER58 DNA MER1_type -269 72 7 361 287 51 15 chr2 200610438 200610584 -52645999 - MLT1H1 LTR MaLR 0 586 438 219 69 0 0 chr2 200610977 200611006 -52645577 + (ATTG)n Simple_repeat Simple_repeat 2 30 0 317 164 30 0 chr2 200611016 200611083 -52645500 + CT-rich Low_complexity Low_complexity 3 71 0 527 295 30 75 chr2 200611409 200611649 -52644934 - MLT1H LTR MaLR -313 233 1 373 326 37 0 chr2 200611843 200611978 -52644605 - MIR SINE MIR -72 190 51 1676 303 72 56 chr2 200662492 200664804 -52591779 + L1MCc LINE L1 162 2712 -4410 1087 304 25 14 chr2 200664891 200665567 -52591016 + L1MCc LINE L1 2809 3459 -3482 282 56 0 0 chr2 200665738 200665774 -52590809 + (TATG)n Simple_repeat Simple_repeat 4 39 0 423 0 0 0 chr2 200665776 200665823 -52590760 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 12570 200 36 40 chr2 200666151 200667427 -52589156 + L1MA4 LINE L1 7 1287 -5195 2178 72 0 0 chr2 200667427 200667691 -52588892 + AluSx SINE Alu 42 305 -7 12570 200 36 40 chr2 200667691 200669258 -52587325 + L1MA4 LINE L1 1287 2860 -3622 1993 201 41 7 chr2 200669258 200669676 -52586907 + MSTB1 LTR MaLR 1 432 0 12570 200 36 40 chr2 200669676 200671457 -52585126 + L1MA4 LINE L1 2860 4647 -1835 1838 141 59 0 chr2 200671457 200671747 -52584836 + AluSx SINE Alu 1 307 -5 12570 200 36 40 chr2 200671747 200673641 -52582942 + L1MA4 LINE L1 4647 6477 -5 345 321 82 0 chr2 200675336 200675470 -52581113 - MIR SINE MIR -70 192 48 6894 171 161 29 chr2 200675680 200677231 -52579352 + MER52A LTR ERV1 1 1755 0 205 195 0 0 chr2 200678080 200678121 -52578462 + (TA)n Simple_repeat Simple_repeat 1 41 0 391 314 149 36 chr2 200678577 200679073 -52577510 - L1MEc LINE L1 -4675 1721 1170 32 43 0 0 chr2 200679097 200679143 -52577440 + AT_rich Low_complexity Low_complexity 1 46 0 331 253 91 0 chr2 200679276 200679375 -52577208 + L1PB4 LINE L1 6048 6155 -1 244 176 0 0 chr2 200679707 200679758 -52576825 + Alu SINE Alu 252 302 0 * 352 333 18 0 chr2 200679757 200679868 -52576715 + MER52A LTR ERV1 1120 1232 -523 943 266 34 0 chr2 200679911 200680174 -52576409 + MER58B DNA MER1_type 69 340 -1 302 238 180 8 chr2 200680962 200681084 -52575499 + MLT1H1 LTR MaLR 401 543 -12 199 407 51 8 chr2 200681380 200681498 -52575085 - L2 LINE L2 -40 3232 3110 21 36 0 0 chr2 200681509 200681537 -52575046 + AT_rich Low_complexity Low_complexity 1 28 0 25341 32 0 1 chr2 200681813 200685659 -52570924 - L1PA3 LINE L1 0 6155 2313 757 42 0 0 chr2 200685659 200685754 -52570829 + L1PA3 LINE L1 2219 2313 -3833 357 268 0 21 chr2 200685905 200686002 -52570581 + MER81 DNA DNA 16 110 -4 1814 177 34 3 chr2 200687685 200688013 -52568570 - L1MC1 LINE L1 -30 6303 5966 440 290 18 39 chr2 200688013 200688292 -52568291 + L1M4 LINE L1 3273 3545 -2601 1306 288 52 5 chr2 200688309 200688899 -52567684 + L1M4 LINE L1 3849 4466 -1680 2708 10 0 3 chr2 200688907 200689213 -52567370 - AluYa5 SINE Alu -6 305 1 23 0 0 0 chr2 200689414 200689437 -52567146 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr2 200690252 200690277 -52566306 + AT_rich Low_complexity Low_complexity 1 25 0 1816 223 101 8 chr2 200690866 200691382 -52565201 - MER63C DNA MER1_type -320 610 47 1719 163 65 39 chr2 200691392 200691747 -52564836 - THE1B LTR MaLR 0 364 1 288 228 6 7 chr2 200691777 200691865 -52564718 - L1MC1 LINE L1 -335 5786 5718 573 208 31 0 chr2 200691897 200692027 -52564556 - MER58B DNA MER1_type -5 336 203 1634 203 10 65 chr2 200692101 200692514 -52564069 - MLT1B LTR MaLR 0 390 1 232 368 8 0 chr2 200692597 200692714 -52563869 - L1MC1 LINE L1 -654 5508 5391 185 276 134 31 chr2 200693392 200693519 -52563064 + MIR SINE MIR 122 261 -1 1092 236 52 46 chr2 200694100 200694447 -52562136 - MLT1A1 LTR MaLR 0 365 17 21 36 0 0 chr2 200694841 200694869 -52561714 + AT_rich Low_complexity Low_complexity 1 28 0 1254 245 121 79 chr2 200695498 200695588 -52560995 - MER77 LTR ERV1 -11 594 509 198 71 0 0 chr2 200695588 200695616 -52560967 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1254 245 121 79 chr2 200695616 200696056 -52560527 - MER77 LTR ERV1 -96 509 42 2169 159 23 58 chr2 200696540 200696975 -52559608 + MSTB LTR MaLR 7 426 0 208 200 50 12 chr2 200697035 200697115 -52559468 + (TCTA)n Simple_repeat Simple_repeat 1 83 0 354 179 15 0 chr2 200697127 200697194 -52559389 + L1MC4 LINE L1 7969 8036 -6 32 26 0 0 chr2 200697310 200697349 -52559234 + AT_rich Low_complexity Low_complexity 1 39 0 2224 16 0 0 chr2 200697444 200697702 -52558881 + L1PA2 LINE L1 5895 6152 -3 13792 146 42 7 chr2 200697728 200700041 -52556542 + Tigger1 DNA MER2_type 24 2418 0 46 74 0 0 chr2 200700338 200700433 -52556150 + AT_rich Low_complexity Low_complexity 1 95 0 24 91 0 0 chr2 200700567 200700633 -52555950 + AT_rich Low_complexity Low_complexity 1 66 0 2677 171 24 57 chr2 200700771 200701316 -52555267 + Tigger7 DNA MER2_type 1 527 -206 514 157 9 74 chr2 200701291 200701399 -52555184 + Tigger7 DNA MER2_type 2387 2487 0 * 459 316 107 56 chr2 200701556 200701907 -52554676 + L2 LINE L2 2853 3226 -87 1831 151 12 6 chr2 200701907 200702231 -52554352 - L1PA16 LINE L1 0 6166 5841 459 316 107 56 chr2 200702231 200702253 -52554330 + L2 LINE L2 3226 3245 -68 255 357 0 0 chr2 200702266 200702350 -52554233 + L2 LINE L2 3216 3299 -14 452 232 149 0 chr2 200702354 200702562 -52554021 + L1ME LINE L1 5209 5443 -727 917 336 131 5 chr2 200702577 200702967 -52553616 + Zaphod DNA AcHobo 151 589 -3442 777 160 14 7 chr2 200702960 200703104 -52553479 + MER115 DNA AcHobo 549 693 0 * 403 63 32 0 chr2 200703135 200703198 -52553385 + (TA)n Simple_repeat Simple_repeat 2 66 0 201 147 0 0 chr2 200703203 200703237 -52553346 + (CA)n Simple_repeat Simple_repeat 1 34 0 2615 40 0 0 chr2 200703306 200703610 -52552973 + AluY SINE Alu 1 304 -7 25 51 0 0 chr2 200703673 200703712 -52552871 + AT_rich Low_complexity Low_complexity 1 39 0 352 343 117 22 chr2 200703870 200704272 -52552311 + L1MC/D LINE L1 5376 5815 -1993 210 171 0 0 chr2 200705028 200705069 -52551514 + CT-rich Low_complexity Low_complexity 2 42 0 200 182 0 45 chr2 200705121 200705165 -52551418 + (TAGA)n Simple_repeat Simple_repeat 3 44 0 1760 132 89 0 chr2 200705341 200705621 -52550962 + AluSc SINE Alu 1 305 -4 341 184 0 13 chr2 200705621 200705697 -52550886 + GA-rich Low_complexity Low_complexity 2 76 0 * 830 107 13 49 chr2 200705695 200705937 -52550646 + (GAAA)n Simple_repeat Simple_repeat 1 233 0 1246 190 0 100 chr2 200705939 200706311 -52550272 + AluJb SINE Alu 3 343 0 586 234 0 0 chr2 200707724 200707852 -52548731 - MER94 DNA DNA -6 128 1 290 301 32 49 chr2 200708257 200708380 -52548203 + MER94 DNA DNA 1 121 -13 21 0 0 0 chr2 200708969 200708990 -52547593 + AT_rich Low_complexity Low_complexity 1 21 0 2656 13 3 0 chr2 200709147 200709445 -52547138 + AluYa5 SINE Alu 1 299 -12 4328 27 0 0 chr2 200709814 200710340 -52546243 - L1PA2 LINE L1 -743 5403 4878 6628 13 0 0 chr2 200710340 200711085 -52545498 + L1PA2 LINE L1 5399 6152 -3 180 158 0 0 chr2 200711092 200711130 -52545453 + A-rich Low_complexity Low_complexity 1 38 0 3215 209 33 1 chr2 200711692 200712387 -52544196 + LTR62 LTR ERVK 1 717 -2 26 0 0 0 chr2 200712658 200712684 -52543899 + AT_rich Low_complexity Low_complexity 1 26 0 246 140 160 0 chr2 200712970 200713020 -52543563 - MER103 DNA DNA -55 111 54 228 339 45 27 chr2 200713379 200713491 -52543092 + AluYa5 SINE Alu 155 268 -33 1517 297 94 13 chr2 200714051 200714731 -52541852 - L1ME3A LINE L1 -14 6090 5356 35 63 0 0 chr2 200714746 200714809 -52541774 + AT_rich Low_complexity Low_complexity 1 63 0 263 321 18 0 chr2 200714911 200715023 -52541560 + (TA)n Simple_repeat Simple_repeat 2 115 0 379 250 94 10 chr2 200715040 200715232 -52541351 - L1ME3A LINE L1 -931 5149 4942 300 276 55 63 chr2 200715391 200715518 -52541065 - MIR SINE MIR -81 181 56 722 331 108 30 chr2 200716073 200716872 -52539711 + L2 LINE L2 2402 3313 0 245 235 94 0 chr2 200717187 200717272 -52539311 - L1ME3A LINE L1 -3932 2148 2056 405 320 111 34 chr2 200717295 200717648 -52538935 - L1ME3A LINE L1 -4692 1388 1009 958 272 77 97 chr2 200717702 200718578 -52538005 - L1ME3A LINE L1 -5196 874 17 317 361 37 0 chr2 200719061 200719169 -52537414 - L2 LINE L2 -5 3267 3156 2092 224 14 8 chr2 200720644 200721386 -52535197 + L1MC1 LINE L1 4783 5532 -743 4116 187 20 1 chr2 200721601 200722396 -52534187 + L1MC1 LINE L1 5523 6332 -1 260 354 57 38 chr2 200722657 200722815 -52533768 - L2 LINE L2 -2105 1209 1049 21 0 0 0 chr2 200722988 200723009 -52533574 + AT_rich Low_complexity Low_complexity 1 21 0 33 25 0 0 chr2 200723559 200723599 -52532984 + AT_rich Low_complexity Low_complexity 1 40 0 273 75 0 0 chr2 200725368 200725408 -52531175 + (TG)n Simple_repeat Simple_repeat 2 41 0 1864 249 26 9 chr2 200725485 200726018 -52530565 - L1ME1 LINE L1 -124 6042 5501 29 70 0 0 chr2 200726484 200726541 -52530042 + AT_rich Low_complexity Low_complexity 1 57 0 290 207 0 17 chr2 200726624 200726682 -52529901 + Charlie4a DNA MER1_type 1 57 -451 609 302 22 49 chr2 200726687 200726912 -52529671 + MLT1H1 LTR MaLR 13 231 -324 269 243 107 30 chr2 200726953 200727133 -52529450 + MLT1G1 LTR MaLR 343 595 0 1044 269 40 7 chr2 200727136 200727560 -52529023 + Charlie4a DNA MER1_type 65 502 -6 234 227 160 0 chr2 200728055 200728130 -52528453 - MLT1I LTR MaLR -3 406 320 21 0 0 0 chr2 200729048 200729069 -52527514 + AT_rich Low_complexity Low_complexity 1 21 0 267 216 91 45 chr2 200729294 200729382 -52527201 + L2 LINE L2 3216 3307 -6 21 89 0 0 chr2 200730453 200730509 -52526074 + AT_rich Low_complexity Low_complexity 1 56 0 228 341 0 0 chr2 200731325 200731407 -52525176 + (CATATA)n Simple_repeat Simple_repeat 5 86 0 29 0 0 0 chr2 200731840 200731869 -52524714 + AT_rich Low_complexity Low_complexity 1 29 0 22 70 0 0 chr2 200731935 200731978 -52524605 + AT_rich Low_complexity Low_complexity 1 43 0 373 96 0 0 chr2 200731989 200732041 -52524542 - MSTD LTR MaLR 0 396 345 1235 209 62 22 chr2 200732055 200732328 -52524255 + AluJo SINE Alu 6 289 -23 1404 220 69 6 chr2 200732328 200732646 -52523937 - MSTD LTR MaLR -58 338 1 29 78 0 0 chr2 200732731 200732795 -52523788 + AT_rich Low_complexity Low_complexity 1 64 0 25 0 0 0 chr2 200733111 200733136 -52523447 + AT_rich Low_complexity Low_complexity 1 25 0 238 351 67 22 chr2 200734579 200734713 -52521870 - MLT1I LTR MaLR -90 319 180 29 0 0 0 chr2 200734991 200735020 -52521563 + AT_rich Low_complexity Low_complexity 1 29 0 838 196 51 28 chr2 200735922 200736136 -52520447 - MLT1D LTR MaLR 0 505 287 1558 195 87 50 chr2 200736180 200736616 -52519967 - LTR48 LTR ERV1 -3 784 333 2476 160 25 91 chr2 200736618 200737225 -52519358 - LTR8 LTR ERV1 -124 567 1 1312 198 70 17 chr2 200737225 200737523 -52519060 - LTR48 LTR ERV1 -473 314 1 2169 110 7 3 chr2 200737722 200738021 -52518562 + AluSx SINE Alu 3 302 -10 182 351 54 27 chr2 200738966 200739040 -52517543 + L2 LINE L2 3143 3218 -54 675 252 69 69 chr2 200739665 200740026 -52516557 - MLT1B LTR MaLR -8 382 22 249 302 0 23 chr2 200740536 200740622 -52515961 + HAL1b LINE L1 373 456 -892 23 0 0 0 chr2 200740732 200740755 -52515828 + AT_rich Low_complexity Low_complexity 1 23 0 861 285 21 45 chr2 200740832 200741120 -52515463 + MLT1F LTR MaLR 186 466 -76 24 32 0 0 chr2 200741199 200741230 -52515353 + AT_rich Low_complexity Low_complexity 1 31 0 9103 73 15 98 chr2 200741324 200742836 -52513747 + SVA Other Other 1 1386 0 377 295 42 79 chr2 200742927 200743168 -52513415 + L1MC2 LINE L1 668 899 -5524 23 68 0 0 chr2 200743226 200743270 -52513313 + AT_rich Low_complexity Low_complexity 1 44 0 2390 242 62 21 chr2 200743409 200744617 -52511966 + L1MC2 LINE L1 5140 6392 -747 501 208 32 40 chr2 200744597 200744722 -52511861 + L1MC2 LINE L1 6972 7095 -44 * 2415 70 3 0 chr2 200745124 200745425 -52511158 + AluY SINE Alu 3 304 -7 341 311 39 59 chr2 200745481 200745735 -52510848 + L1M4 LINE L1 3530 3778 -2368 198 143 0 0 chr2 200745745 200745780 -52510803 + (TG)n Simple_repeat Simple_repeat 2 36 0 447 290 104 36 chr2 200746165 200746500 -52510083 + L1M4 LINE L1 4894 5251 -895 3154 196 38 84 chr2 200746854 200747755 -52508828 - MER21B LTR ERV1 -4 859 1 347 106 100 0 chr2 200748630 200748790 -52507793 + (TA)n Simple_repeat Simple_repeat 2 177 0 229 267 12 23 chr2 200748804 200748890 -52507693 + (TA)n Simple_repeat Simple_repeat 2 86 0 2386 209 5 23 chr2 200750631 200751186 -52505397 - L1P LINE L1 -1126 5723 5179 1304 247 24 7 chr2 200751186 200751667 -52504916 - L1PA15-16 LINE L1 -3693 3156 2662 706 276 107 21 chr2 200751667 200752004 -52504579 - Charlie7 DNA MER1_type -2209 403 38 351 180 0 0 chr2 200752104 200752165 -52504418 - L1M2 LINE L1 -4282 2567 2507 * 4419 161 44 28 chr2 200752160 200753287 -52503296 + L1PA16 LINE L1 5016 6163 -3 21 0 0 0 chr2 200753768 200753789 -52502794 + AT_rich Low_complexity Low_complexity 1 21 0 3963 74 8 0 chr2 200753796 200754320 -52502263 - L1P3 LINE L1 -373 5799 5272 752 298 31 31 chr2 200754320 200754709 -52501874 - Charlie7 DNA MER1_type -794 1818 1430 694 302 165 15 chr2 200754864 200755271 -52501312 - Charlie7 DNA MER1_type -2087 525 58 310 282 73 9 chr2 200755489 200755599 -52500984 - MIR SINE MIR -111 151 35 427 271 85 0 chr2 200755603 200755732 -52500851 + MIR SINE MIR 122 261 -1 212 270 0 27 chr2 200756030 200756081 -52500502 + GA-rich Low_complexity Low_complexity 2 52 -21 2375 80 3 6 chr2 200756081 200756392 -52500191 + AluY SINE Alu 1 310 -1 212 270 0 27 chr2 200756392 200756414 -52500169 + GA-rich Low_complexity Low_complexity 52 73 0 1512 135 143 8 chr2 200757275 200757541 -52499042 - AluSx SINE Alu -10 302 1 287 284 49 10 chr2 200757624 200757726 -52498857 + MIR SINE MIR 144 249 -13 28 61 0 0 chr2 200759214 200759263 -52497320 + AT_rich Low_complexity Low_complexity 1 49 0 1549 202 49 0 chr2 200759578 200759905 -52496678 - MER2 DNA MER2_type 0 344 2 22 80 0 0 chr2 200760239 200760289 -52496294 + AT_rich Low_complexity Low_complexity 1 50 0 1868 206 93 3 chr2 200760644 200761032 -52495551 + L1M1 LINE L1 1687 2109 -5456 * 6066 144 22 10 chr2 200761021 200761657 -52494926 + L1MA2 LINE L1 5114 5771 -533 1972 127 111 15 chr2 200761657 200761989 -52494594 - THE1B LTR MaLR 0 364 1 6066 144 22 10 chr2 200761989 200762530 -52494053 + L1MA2 LINE L1 5771 6304 0 1719 203 139 20 chr2 200762881 200763370 -52493213 - LTR10A LTR ERV1 -62 547 1 1202 188 196 21 chr2 200763526 200763614 -52492969 + LTR7 LTR ERV1 1 72 -378 6997 20 0 0 chr2 200763614 200764419 -52492164 + L1PA3 LINE L1 5351 6155 0 1202 188 196 21 chr2 200764419 200764713 -52491870 + LTR7 LTR ERV1 72 450 0 607 244 132 95 chr2 200764722 200765084 -52491499 + HAL1 LINE L1 1705 2052 -455 695 242 50 22 chr2 200765084 200765266 -52491317 - MER5A DNA MER1_type -2 187 1 607 244 132 95 chr2 200765266 200765496 -52491087 + HAL1 LINE L1 2052 2330 -177 2235 104 0 3 chr2 200765496 200765784 -52490799 - AluSp SINE Alu -24 289 3 607 244 132 95 chr2 200765784 200765896 -52490687 + HAL1 LINE L1 2330 2436 -71 960 205 91 16 chr2 200765913 200766167 -52490416 + MER82 DNA MER2_type 360 632 -21 2663 98 74 5 chr2 200766171 200766590 -52489993 + LTR7 LTR ERV1 1 448 -2 14941 104 17 16 chr2 200766592 200769339 -52487244 + HERVH LTR ERV1 1 2992 -4721 5862 93 9 7 chr2 200769325 200770177 -52486406 + HERVH LTR ERV1 3140 3993 -3720 * 1269 100 16 0 chr2 200770179 200770369 -52486214 + HERVH LTR ERV1 4488 4680 -3033 * 13412 89 17 9 chr2 200770355 200772284 -52484299 + HERVH LTR ERV1 5769 7713 0 2645 86 74 19 chr2 200772284 200772704 -52483879 + LTR7 LTR ERV1 1 443 -7 185 346 22 44 chr2 200772744 200772926 -52483657 + L2 LINE L2 2206 2383 -931 37105 97 9 7 chr2 200773036 200779160 -52477423 - L1PA6 LINE L1 -3 6151 13 359 407 13 26 chr2 200779200 200779426 -52477157 + L2 LINE L2 2851 3073 -199 2017 218 42 42 chr2 200780284 200781071 -52475512 - L1M4 LINE L1 -404 6591 5815 5663 170 52 5 chr2 200781087 200783233 -52473350 - L1MA3 LINE L1 0 7724 5482 14132 170 60 9 chr2 200783238 200785498 -52471085 - L1MA3 LINE L1 -3457 4108 1647 213 39 0 0 chr2 200785498 200785524 -52471059 + (TC)n Simple_repeat Simple_repeat 2 27 0 14132 170 60 9 chr2 200785524 200786329 -52470254 - L1MA3 LINE L1 -5918 1647 885 1716 203 12 6 chr2 200786333 200786654 -52469929 - L1MA3 LINE L1 -7231 334 12 3637 259 65 24 chr2 200786900 200788415 -52468168 - L1M4 LINE L1 -1918 5039 3463 2109 208 13 77 chr2 200788564 200789190 -52467393 - LTR60 LTR ERV1 0 586 1 3086 266 81 70 chr2 200789190 200792535 -52464048 - L1M4 LINE L1 -3493 3464 103 22 56 0 0 chr2 200794512 200794548 -52462035 + AT_rich Low_complexity Low_complexity 1 36 0 246 260 55 0 chr2 200794618 200794691 -52461892 + MIR SINE MIR 159 235 -27 192 40 0 0 chr2 200795048 200795073 -52461510 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 255 319 0 11 chr2 200795364 200795458 -52461125 - MLT1J2 LTR MaLR -277 173 81 311 296 151 27 chr2 200795605 200795791 -52460792 + L1ME LINE L1 5508 5716 -405 437 274 129 49 chr2 200796359 200796684 -52459899 + LTR40a LTR ERVL 120 470 -49 2047 173 9 3 chr2 200797156 200797502 -52459081 - MER7A DNA MER2_type 0 346 1 21 0 0 0 chr2 200798493 200798514 -52458069 + AT_rich Low_complexity Low_complexity 1 21 0 330 300 20 67 chr2 200798640 200798790 -52457793 + MIR SINE MIR 33 175 -87 258 32 0 0 chr2 200799339 200799370 -52457213 + (TG)n Simple_repeat Simple_repeat 2 32 0 387 77 0 0 chr2 200799378 200799430 -52457153 - AluSc SINE Alu -65 234 183 569 121 11 0 chr2 200799430 200799521 -52457062 - AluS SINE Alu -220 92 1 990 136 71 10 chr2 200799968 200800166 -52456417 + Tigger2 DNA MER2_type 1 210 -2508 613 175 10 160 chr2 200800141 200800347 -52456236 + Tigger2 DNA MER2_type 2534 2708 -10 * 239 202 11 45 chr2 200800597 200800686 -52455897 + (TA)n Simple_repeat Simple_repeat 1 86 0 215 365 27 0 chr2 200801756 200801830 -52454753 + MER5A DNA MER1_type 64 139 -50 278 351 26 0 chr2 200801917 200801994 -52454589 + L2 LINE L2 3168 3246 -26 209 325 39 58 chr2 200802403 200802557 -52454026 - MIR SINE MIR -106 156 6 431 203 27 54 chr2 200802669 200802817 -52453766 - L1MA10 LINE L1 -3 6331 6188 2156 99 7 10 chr2 200802823 200803127 -52453456 - AluSx SINE Alu -9 303 1 1857 252 93 37 chr2 200803181 200803812 -52452771 - L1ME1 LINE L1 -162 6502 5908 2256 69 10 7 chr2 200803812 200804100 -52452483 - AluY SINE Alu -22 289 1 1857 252 93 37 chr2 200804100 200804911 -52451672 - L1ME1 LINE L1 -756 5908 4965 339 318 55 27 chr2 200805024 200805244 -52451339 - L1ME1 LINE L1 -6262 280 55 2323 86 0 7 chr2 200805606 200805908 -52450675 + AluY SINE Alu 1 300 -11 4790 88 138 1 chr2 200806182 200806909 -52449674 - LTR12 LTR ERV1 0 826 1 813 235 10 41 chr2 200806944 200807140 -52449443 + MLT1A1 LTR MaLR 1 190 -175 629 205 0 41 chr2 200807655 200807777 -52448806 - FLAM_A SINE Alu -16 117 1 22 35 0 0 chr2 200807855 200807884 -52448699 + AT_rich Low_complexity Low_complexity 1 29 0 253 335 120 14 chr2 200808923 200809112 -52447471 - MIR SINE MIR -5 203 1 575 298 86 60 chr2 200809172 200809635 -52446948 + MLT1J LTR MaLR 1 475 -36 2249 181 31 27 chr2 200810552 200811034 -52445549 - MER66B LTR ERV1 0 486 3 2524 58 0 0 chr2 200812508 200812817 -52443766 - AluY SINE Alu -2 309 1 219 382 44 15 chr2 200812896 200813032 -52443551 + MIR3 SINE MIR 4 143 -65 25 31 0 0 chr2 200813984 200814016 -52442567 + AT_rich Low_complexity Low_complexity 1 32 0 216 0 0 0 chr2 200814970 200814994 -52441589 + (TG)n Simple_repeat Simple_repeat 2 25 0 21 0 0 0 chr2 200815404 200815425 -52441158 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 200816240 200816261 -52440322 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 200817507 200817536 -52439047 + AT_rich Low_complexity Low_complexity 1 29 0 27 49 0 0 chr2 200818225 200818266 -52438317 + AT_rich Low_complexity Low_complexity 1 41 0 25 31 0 0 chr2 200819579 200819611 -52436972 + AT_rich Low_complexity Low_complexity 1 32 0 292 258 0 0 chr2 200819981 200820047 -52436536 + MLT1K LTR MaLR 168 233 -355 27 0 0 0 chr2 200820650 200820677 -52435906 + AT_rich Low_complexity Low_complexity 1 27 0 26 50 0 0 chr2 200820705 200820745 -52435838 + AT_rich Low_complexity Low_complexity 1 40 0 2886 121 5 5 chr2 200821587 200822018 -52434565 + MER57B LTR ERV1 1 431 -3 1745 146 190 11 chr2 200822091 200822454 -52434129 + MSTA LTR MaLR 1 428 0 2724 13 0 0 chr2 200822633 200822939 -52433644 + AluY SINE Alu 1 306 -5 2610 185 24 16 chr2 200823809 200824316 -52432267 - MLT2B2 LTR ERVL -4 511 1 252 286 52 0 chr2 200824317 200824394 -52432189 + MLT1L LTR MaLR 463 543 -72 200 220 203 51 chr2 200824687 200824805 -52431778 + L2 LINE L2 3137 3272 0 186 321 83 12 chr2 200825170 200825254 -52431329 - L2 LINE L2 -5 3267 3178 183 100 0 0 chr2 200825289 200825319 -52431264 + (TAAAAA)n Simple_repeat Simple_repeat 4 33 0 2065 135 0 3 chr2 200825651 200825954 -52430629 + AluSx SINE Alu 1 302 -10 441 247 96 21 chr2 200827378 200827596 -52428987 - MER106B DNA MER1_type 0 1059 1 21 0 0 0 chr2 200828718 200828739 -52427844 + AT_rich Low_complexity Low_complexity 1 21 0 2230 104 3 3 chr2 200828778 200829086 -52427497 + AluSq SINE Alu 1 308 -5 213 211 35 0 chr2 200829287 200829344 -52427239 + A-rich Low_complexity Low_complexity 3 61 0 2105 117 0 0 chr2 200829444 200829751 -52426832 - AluSc SINE Alu 0 307 1 209 191 32 16 chr2 200830137 200830200 -52426383 + (TAGA)n Simple_repeat Simple_repeat 1 64 0 21 0 0 0 chr2 200830420 200830441 -52426142 + AT_rich Low_complexity Low_complexity 1 21 0 1956 81 21 0 chr2 200831720 200832003 -52424580 + L1PA7 LINE L1 5865 6153 -1 687 230 105 52 chr2 200832970 200833314 -52423269 - L1ME2 LINE L1 -12 6152 5791 297 229 78 30 chr2 200833302 200833468 -52423115 - L1ME2 LINE L1 -888 5445 5272 * 626 265 118 52 chr2 200833510 200834110 -52422473 - L1ME2 LINE L1 -861 5285 4646 1159 187 42 69 chr2 200834110 200834399 -52422184 - LTR47A LTR ERVL 0 452 172 362 167 0 0 chr2 200834404 200834464 -52422119 - LTR47A LTR ERVL -392 60 1 412 230 93 19 chr2 200834465 200834626 -52421957 - L1ME2 LINE L1 -1497 4649 4477 284 296 51 23 chr2 200834706 200834882 -52421701 - L1ME2 LINE L1 -1834 4312 4132 295 219 0 49 chr2 200884883 200885006 -52371577 - L1M2 LINE L1 -3990 2859 2743 * 622 172 26 0 chr2 200884984 200885135 -52371448 - L1M2 LINE L1 -4965 1884 1730 4933 225 39 7 chr2 200885156 200886241 -52370342 + MST-int LTR MaLR 370 1488 -163 313 285 99 43 chr2 200887638 200887891 -52368692 - HAL1b LINE L1 -620 728 462 704 244 45 23 chr2 200888953 200889129 -52367454 + MLT1E2 LTR MaLR 358 537 -89 2857 233 44 27 chr2 200889131 200890050 -52366533 + L1ME1 LINE L1 5224 6162 -4 53 69 0 0 chr2 200890231 200890333 -52366250 + AT_rich Low_complexity Low_complexity 1 102 0 21 0 0 0 chr2 200890673 200890694 -52365889 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 200890868 200890889 -52365694 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 200890989 200891014 -52365569 + AT_rich Low_complexity Low_complexity 1 25 0 1897 162 0 0 chr2 200892294 200892590 -52363993 + AluSx SINE Alu 1 296 -16 1050 242 119 26 chr2 200893622 200894192 -52362391 + L1MEc LINE L1 771 1393 -5003 1055 256 107 40 chr2 200894289 200894918 -52361665 + L1MEc LINE L1 1597 2267 -4129 204 85 0 85 chr2 200895046 200895105 -52361478 + (TA)n Simple_repeat Simple_repeat 1 54 0 937 220 168 86 chr2 200898399 200898835 -52357748 + MER66A LTR ERV1 100 468 -10 269 247 0 11 chr2 200898873 200898966 -52357617 + (TA)n Simple_repeat Simple_repeat 2 93 0 1544 214 23 0 chr2 200899229 200899533 -52357050 - MER66A LTR ERV1 -162 316 6 23 33 0 0 chr2 200901322 200901352 -52355231 + AT_rich Low_complexity Low_complexity 1 30 0 421 333 85 59 chr2 200901854 200902244 -52354339 - HAL1 LINE L1 -932 1575 1176 29 47 0 0 chr2 200902501 200902544 -52354039 + AT_rich Low_complexity Low_complexity 1 43 0 211 188 42 0 chr2 200904757 200904805 -52351778 + T-rich Low_complexity Low_complexity 3 52 0 21 0 0 0 chr2 200905250 200905271 -52351312 + AT_rich Low_complexity Low_complexity 1 21 0 214 267 0 0 chr2 200905508 200905553 -52351030 + (CATA)n Simple_repeat Simple_repeat 2 46 0 249 196 20 0 chr2 200906585 200906636 -52349947 + MER20 DNA MER1_type 168 219 0 471 95 0 40 chr2 200907074 200907148 -52349435 + AluSg/x SINE Alu 210 280 -30 263 333 62 19 chr2 200907241 200907403 -52349180 + L1MEc LINE L1 1534 1702 -4694 237 189 0 19 chr2 200907432 200907485 -52349098 + A-rich Low_complexity Low_complexity 2 53 0 1098 207 14 0 chr2 200907602 200907810 -52348773 + MER2 DNA MER2_type 1 211 -134 195 114 0 0 chr2 200907822 200907857 -52348726 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 992 162 35 5 chr2 200908195 200908392 -52348191 - L1MA9 LINE L1 0 6312 6110 867 191 10 31 chr2 200908393 200908587 -52347996 - Tigger1 DNA MER2_type -1 2417 2228 5322 147 43 12 chr2 200908601 200909561 -52347022 - Tigger1 DNA MER2_type -409 2009 1021 7243 48 130 7 chr2 200909562 200910576 -52346007 - L1P LINE L1 -5007 1139 1 287 255 57 28 chr2 200910590 200910731 -52345852 - L1MEd LINE L1 -5033 1086 942 21 36 0 0 chr2 200911091 200911119 -52345464 + AT_rich Low_complexity Low_complexity 1 28 0 191 146 24 0 chr2 200911129 200911170 -52345413 + (TA)n Simple_repeat Simple_repeat 1 42 0 226 303 17 17 chr2 200911266 200911385 -52345198 - L1M4 LINE L1 -2005 4141 4023 265 224 40 13 chr2 200911745 200911821 -52344762 - MIR SINE MIR -103 159 82 188 409 94 0 chr2 200912712 200912861 -52343722 + MIR SINE MIR 48 210 -52 1909 148 3 6 chr2 200913866 200914177 -52342406 - AluSg SINE Alu 0 310 1 277 245 0 98 chr2 200914394 200914496 -52342087 + MER63 DNA MER1_type 7 724 -338 1783 198 59 37 chr2 200915378 200915838 -52340745 - L1MC4a LINE L1 -1 7807 7338 207 0 0 0 chr2 200916581 200916604 -52339979 + (TA)n Simple_repeat Simple_repeat 2 24 0 1533 175 45 53 chr2 200916830 200917208 -52339375 - THE1C LTR MaLR 0 375 1 260 301 199 58 chr2 200917265 200917647 -52338936 - LTR67 LTR ERVL -57 500 65 21 57 0 0 chr2 200918160 200918195 -52338388 + AT_rich Low_complexity Low_complexity 1 35 0 325 258 0 43 chr2 200919474 200919567 -52337016 - L1MC4 LINE L1 -1340 6702 6614 210 136 0 0 chr2 200919568 200919612 -52336971 + (TA)n Simple_repeat Simple_repeat 1 44 0 971 289 0 39 chr2 200920727 200921039 -52335544 + MLT1A2 LTR MaLR 75 374 0 199 307 71 36 chr2 200921511 200921651 -52334932 - L2 LINE L2 0 3313 3169 580 206 0 0 chr2 200921938 200922045 -52334538 + FLAM_C SINE Alu 1 107 -36 216 433 37 5 chr2 200922061 200922276 -52334307 - L2 LINE L2 -548 2766 2545 2149 130 3 0 chr2 200922325 200922626 -52333957 + AluSx SINE Alu 1 302 -10 1909 208 48 50 chr2 200922864 200923209 -52333374 + MLT1D LTR MaLR 3 348 -157 2307 159 9 49 chr2 200923209 200923655 -52332928 - MSTA LTR MaLR 0 428 1 1909 208 48 50 chr2 200923655 200923813 -52332770 + MLT1D LTR MaLR 348 505 0 1544 266 29 65 chr2 200923814 200924476 -52332107 + MLT1D-int LTR MaLR 2 639 -732 310 308 124 40 chr2 200924608 200924858 -52331725 + L2 LINE L2 2053 2323 -991 297 228 88 29 chr2 200925729 200925865 -52330718 - HAL1 LINE L1 -349 2158 2015 1723 166 107 78 chr2 200926718 200927165 -52329418 + MLT1C LTR MaLR 3 462 -5 225 299 75 9 chr2 200927356 200927463 -52329120 - HAL1b LINE L1 -437 911 798 2334 96 0 0 chr2 200927759 200928060 -52328523 + AluSg SINE Alu 1 301 -9 24 113 0 0 chr2 200928152 200928267 -52328316 + AT_rich Low_complexity Low_complexity 1 115 0 242 325 47 62 chr2 200928436 200928710 -52327873 - HAL1 LINE L1 -599 1908 1639 768 199 20 14 chr2 200929684 200929830 -52326753 + FRAM SINE Alu 1 146 -30 2576 179 32 11 chr2 200929922 200930476 -52326107 - L1MB3 LINE L1 -14 6169 5604 249 234 91 111 chr2 200930928 200931081 -52325502 + MIR SINE MIR 61 215 -47 231 36 0 0 chr2 200931082 200931110 -52325473 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 1449 168 74 148 chr2 200931804 200931993 -52324590 + MLT1D LTR MaLR 10 211 -294 1892 121 16 13 chr2 200931993 200932298 -52324285 + AluY SINE Alu 1 306 -5 1449 168 74 148 chr2 200932298 200932595 -52323988 + MLT1D LTR MaLR 211 460 -45 255 81 0 27 chr2 200932695 200932732 -52323851 + MLT1D LTR MaLR 148 183 -322 2257 91 0 10 chr2 200932745 200933054 -52323529 + AluY SINE Alu 1 306 -5 1342 182 106 55 chr2 200933067 200933396 -52323187 + MLT1D LTR MaLR 160 505 0 2158 116 0 0 chr2 200933649 200933943 -52322640 + AluSc SINE Alu 1 294 -15 5030 149 59 36 chr2 200934371 200935373 -52321210 - L1MA9 LINE L1 0 6312 5288 1870 231 50 8 chr2 200936157 200936654 -52319929 - L1MD3 LINE L1 -25 7970 7453 606 257 82 36 chr2 200936663 200936949 -52319634 + L1MC3 LINE L1 6284 6583 -1225 1024 222 93 22 chr2 200936959 200937315 -52319268 - L1M4 LINE L1 -3169 3475 3095 1534 266 81 51 chr2 200937326 200938199 -52318384 - L1M4 LINE L1 -3608 3036 2191 462 18 0 0 chr2 200938199 200938254 -52318329 + (TATG)n Simple_repeat Simple_repeat 2 56 0 2177 98 0 3 chr2 200938254 200938541 -52318042 - AluSq SINE Alu -27 286 1 1534 266 81 51 chr2 200938541 200938648 -52317935 - L1M4 LINE L1 -4453 2191 2089 5812 133 19 22 chr2 200938648 200939620 -52316963 - LTR5 LTR ERVK 0 969 1 1534 266 81 51 chr2 200939620 200940015 -52316568 - L1M4 LINE L1 -4555 2089 1507 1129 173 111 102 chr2 200940028 200940451 -52316132 - MSTA LTR MaLR -1 427 1 373 109 0 0 chr2 200940480 200940535 -52316048 - L1MA4A LINE L1 -12 6291 6237 1250 105 0 17 chr2 200940535 200940716 -52315867 + THE1B LTR MaLR 187 364 0 9692 125 31 15 chr2 200940716 200942271 -52314312 + THE1B-int LTR MaLR 1 1580 0 2198 134 14 22 chr2 200942273 200942638 -52313945 + THE1B LTR MaLR 3 364 0 5482 190 34 15 chr2 200942640 200944344 -52312239 - L1MA4A LINE L1 -257 6046 4306 1643 168 111 21 chr2 200944344 200944678 -52311905 - THE1B LTR MaLR 0 364 1 5482 190 34 15 chr2 200944678 200944835 -52311748 - L1MA4A LINE L1 -1997 4306 4153 2036 266 41 22 chr2 200944820 200945617 -52310966 - L1MA4A LINE L1 -3335 2811 1993 * 274 294 69 56 chr2 200947138 200947298 -52309285 - MER5B DNA MER1_type 0 178 17 231 274 24 0 chr2 200947691 200947775 -52308808 - L1MA10 LINE L1 -8 6326 6241 360 0 0 0 chr2 200947783 200947823 -52308760 + (CA)n Simple_repeat Simple_repeat 2 41 0 449 294 32 5 chr2 200947851 200948176 -52308407 + L1MCa LINE L1 1523 1960 -4466 297 290 65 7 chr2 200948249 200948387 -52308196 + L1MCa LINE L1 2094 2239 -4368 533 282 112 32 chr2 200948476 200948879 -52307704 + L1MCa LINE L1 2394 2784 -3642 1795 292 47 29 chr2 200948963 200949167 -52307416 + L1MCa LINE L1 3569 3768 -2658 1892 189 116 10 chr2 200949167 200949554 -52307029 + MSTA LTR MaLR 1 428 0 8629 156 21 34 chr2 200949556 200951156 -52305427 + MSTA-int LTR MaLR 3 1580 0 1809 162 141 21 chr2 200951156 200951538 -52305045 + MSTA LTR MaLR 1 428 0 1795 292 47 29 chr2 200951538 200952282 -52304301 + L1MCa LINE L1 3768 4731 -1695 180 111 0 0 chr2 200952282 200952309 -52304274 + (CA)n Simple_repeat Simple_repeat 2 28 0 1795 292 47 29 chr2 200952309 200952622 -52303961 + L1MCa LINE L1 4731 5037 -1389 22 70 0 0 chr2 200953464 200953507 -52303076 + AT_rich Low_complexity Low_complexity 1 43 0 26 50 0 0 chr2 200953688 200953728 -52302855 + AT_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr2 200954236 200954257 -52302326 + AT_rich Low_complexity Low_complexity 1 21 0 246 286 16 8 chr2 200954630 200954756 -52301827 + (TA)n Simple_repeat Simple_repeat 2 128 0 22 56 0 0 chr2 200955012 200955048 -52301535 + AT_rich Low_complexity Low_complexity 1 36 0 432 118 0 0 chr2 200955673 200955741 -52300842 + (TTTA)n Simple_repeat Simple_repeat 2 69 0 1023 245 100 21 chr2 200956572 200956951 -52299632 + LTR52 LTR ERVL 3 411 -10 1246 242 30 30 chr2 200956951 200957314 -52299269 - MLT1A1 LTR MaLR 0 365 3 21 36 0 0 chr2 200957557 200957585 -52298998 + AT_rich Low_complexity Low_complexity 1 28 0 25 51 0 0 chr2 200958482 200958521 -52298062 + AT_rich Low_complexity Low_complexity 1 39 0 21 57 0 0 chr2 200958730 200958765 -52297818 + AT_rich Low_complexity Low_complexity 1 35 0 372 256 0 0 chr2 200959892 200959978 -52296605 - L1MC4 LINE L1 -29 8013 7928 31 0 0 0 chr2 200960758 200960789 -52295794 + AT_rich Low_complexity Low_complexity 1 31 0 216 111 0 0 chr2 200961841 200961877 -52294706 + (TATATG)n Simple_repeat Simple_repeat 6 41 0 346 306 0 0 chr2 200962210 200962295 -52294288 - MER63A DNA MER1_type 0 210 126 2662 238 106 26 chr2 200963101 200964242 -52292341 - L1MD2 LINE L1 -502 6251 4977 1988 180 50 22 chr2 200964242 200964642 -52291941 - LTR57 LTR ERVL 0 411 1 2662 238 106 26 chr2 200964642 200964837 -52291746 - L1MD2 LINE L1 -1776 4977 4799 1905 270 53 14 chr2 200964894 200965402 -52291181 + MER76 LTR ERV 1 528 -160 3145 267 59 42 chr2 200965446 200966073 -52290510 - L1MD2 LINE L1 -1786 4754 4140 2050 127 0 0 chr2 200966073 200966364 -52290219 - AluSg SINE Alu -19 291 1 3145 267 59 42 chr2 200966364 200967488 -52289095 - L1MD2 LINE L1 -2400 4140 2972 471 261 50 53 chr2 200967504 200967787 -52288796 - L1MD2 LINE L1 -4042 2498 2217 557 302 174 28 chr2 200967792 200968223 -52288360 - L1MD2 LINE L1 -4367 2173 1680 1286 230 42 26 chr2 200968227 200968684 -52287899 - L1MD2 LINE L1 -5083 1460 997 573 335 26 46 chr2 200969525 200969913 -52286670 - L1MD2 LINE L1 -6155 385 6 22 70 0 0 chr2 200970212 200970255 -52286328 + AT_rich Low_complexity Low_complexity 1 43 0 24 32 0 0 chr2 200970613 200970644 -52285939 + AT_rich Low_complexity Low_complexity 1 31 0 843 186 80 4 chr2 200971322 200971548 -52285035 + L1MA8 LINE L1 6044 6286 -5 915 230 47 15 chr2 200972568 200972967 -52283616 - MER34 LTR ERV1 -1 541 78 295 269 141 26 chr2 200972970 200973126 -52283457 + L1MC/D LINE L1 5681 5854 -1954 262 164 73 0 chr2 200973138 200973193 -52283390 - MER34 LTR ERV1 -483 59 1 572 225 140 34 chr2 200973205 200973383 -52283200 - MER20 DNA MER1_type -1 218 22 2062 157 13 24 chr2 200973401 200973778 -52282805 - THE1C LTR MaLR -2 373 1 356 308 164 12 chr2 200973778 200974028 -52282555 - L1MC4a LINE L1 -1955 5853 5566 416 302 101 60 chr2 200975056 200975424 -52281159 - LTR33A LTR ERVL -24 499 117 239 330 21 21 chr2 200975701 200975798 -52280785 + L2 LINE L2 3195 3291 -22 180 111 0 0 chr2 200975804 200975831 -52280752 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 892 197 19 24 chr2 200976103 200976316 -52280267 - L1 LINE L1 -940 5206 4995 24 0 0 0 chr2 200977246 200977270 -52279313 + AT_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr2 200977548 200977573 -52279010 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr2 200977845 200977869 -52278714 + AT_rich Low_complexity Low_complexity 1 24 0 24 67 0 0 chr2 200979762 200979807 -52276776 + AT_rich Low_complexity Low_complexity 1 45 0 2814 251 106 29 chr2 200979865 200980816 -52275767 + L1M4c LINE L1 531 1554 -5476 1998 129 21 0 chr2 200980867 200981154 -52275429 + AluSc SINE Alu 1 293 -16 430 240 65 65 chr2 200981160 200981452 -52275131 + L1M4c LINE L1 2754 3045 -4063 7231 199 58 22 chr2 200981481 200984774 -52271809 + L1MA8 LINE L1 2986 6523 -4 1669 163 10 7 chr2 200985970 200986259 -52270324 - AluSx SINE Alu -18 294 5 201 377 0 0 chr2 200986613 200986690 -52269893 + MIR SINE MIR 177 253 -9 267 349 38 15 chr2 200987516 200987648 -52268935 + MIR3 SINE MIR 68 202 -6 23 0 0 0 chr2 200987897 200987920 -52268663 + AT_rich Low_complexity Low_complexity 1 23 0 24 67 0 0 chr2 200988334 200988379 -52268204 + AT_rich Low_complexity Low_complexity 1 45 0 2549 11 0 0 chr2 200988868 200989148 -52267435 - AluY SINE Alu -11 300 21 3867 239 49 26 chr2 200990000 200991961 -52264622 - L1MB5 LINE L1 -106 6304 4299 461 276 174 44 chr2 200991962 200992346 -52264237 - MLT1C LTR MaLR 0 467 34 1764 277 37 19 chr2 200992395 200993073 -52263510 - L1MB5 LINE L1 -2098 4284 3595 2118 151 83 12 chr2 200993095 200993523 -52263060 + MER4D LTR ERV1 1 196 -399 349 279 8 8 chr2 200993528 200993657 -52262926 - L1MB5 LINE L1 -3191 3191 3063 1438 215 14 4 chr2 200993667 200993946 -52262637 - MLT2B1 LTR ERVL -223 297 16 1315 259 15 20 chr2 200993946 200994437 -52262146 - L1MB5 LINE L1 -3472 2910 2423 1479 291 76 38 chr2 200994461 200996131 -52260452 - L1MEc LINE L1 -2535 4005 2263 283 275 60 30 chr2 200996259 200996426 -52260157 - L1MEc LINE L1 -4487 2143 1882 331 257 32 14 chr2 200996838 200997022 -52259561 + MER63D DNA MER1_type 193 441 -620 493 246 33 0 chr2 200997040 200997162 -52259421 + MER63D DNA MER1_type 937 1062 0 216 323 118 11 chr2 200997565 200997658 -52258925 - L2 LINE L2 -5 3267 3165 494 361 55 10 chr2 200998292 200998583 -52258000 + MLT1J2 LTR MaLR 1 304 -146 202 116 70 0 chr2 200998707 200998750 -52257833 + (TA)n Simple_repeat Simple_repeat 1 46 0 459 288 76 65 chr2 200999292 200999740 -52256843 + L1ME4a LINE L1 5617 6069 -52 396 352 91 0 chr2 201001851 201002081 -52254502 + MIR SINE MIR 12 262 0 1131 179 5 0 chr2 201003155 201003345 -52253238 - MER7A DNA MER2_type -136 210 22 * 1688 264 18 22 chr2 201003344 201003802 -52252781 + LTR40c LTR ERVL 7 462 -3 24 32 0 0 chr2 201003994 201004025 -52252558 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr2 201004190 201004213 -52252370 + AT_rich Low_complexity Low_complexity 1 23 0 243 61 0 0 chr2 201005814 201005847 -52250736 + (TTAA)n Simple_repeat Simple_repeat 4 36 0 28 29 0 0 chr2 201007111 201007146 -52249437 + AT_rich Low_complexity Low_complexity 1 35 0 3432 271 72 25 chr2 201007362 201008621 -52247962 + L1M3de LINE L1 17 1475 -5178 231 211 183 0 chr2 201008612 201008683 -52247900 + L1M3de LINE L1 1900 1983 -4670 * 4908 270 42 58 chr2 201008725 201010484 -52246099 + L1MA4A LINE L1 4 1733 -5116 1883 193 61 17 chr2 201010485 201010895 -52245688 - MSTA LTR MaLR 0 428 1 6429 199 36 9 chr2 201010895 201012143 -52244440 - MSTA-int LTR MaLR 0 1651 370 622 172 26 0 chr2 201012164 201012315 -52244268 + L1MA4A LINE L1 1730 1884 -4965 * 5354 262 22 69 chr2 201012293 201015101 -52241482 + L1MA4A LINE L1 2743 5413 -1435 * 12528 24 0 0 chr2 201015098 201016580 -52240003 - L1PA3 LINE L1 -804 5342 3861 6721 34 0 0 chr2 201016580 201017376 -52239207 + L1PA3 LINE L1 5360 6155 0 3852 220 23 5 chr2 201017383 201018782 -52237801 + L1MA4A LINE L1 5398 6820 -185 288 200 0 31 chr2 201018789 201018854 -52237729 + L1MA4A LINE L1 6891 6953 -52 1515 157 68 3 chr2 201018878 201019172 -52237411 + MER65A LTR ERV1 107 419 -26 1232 202 30 0 chr2 201019190 201019423 -52237160 + AluJo SINE Alu 12 251 -61 332 189 27 0 chr2 201019428 201019502 -52237081 + MSTC LTR MaLR 353 428 0 1179 285 48 48 chr2 201019502 201020242 -52236341 - L1M1 LINE L1 -4298 2084 1257 1030 229 0 5 chr2 201020253 201020467 -52236116 - AluJo SINE Alu -13 299 87 5337 280 66 26 chr2 201020513 201021897 -52234686 - MSTD-int LTR MaLR -6 1729 267 1532 22 0 0 chr2 201021897 201022077 -52234506 + AluYb8 SINE Alu 138 317 -1 5337 280 66 26 chr2 201022077 201022352 -52234231 - MSTD-int LTR MaLR -1468 267 4 1308 249 52 29 chr2 201022358 201022743 -52233840 - MSTD LTR MaLR -2 394 1 2910 230 42 28 chr2 201022749 201023853 -52232730 + L1 LINE L1 3294 4422 -3143 396 153 41 31 chr2 201023852 201023950 -52232633 + L1 LINE L1 5925 6023 -1542 * 3647 138 25 25 chr2 201023954 201024607 -52231976 + L1PA16 LINE L1 5514 6166 0 2215 105 0 0 chr2 201024624 201024920 -52231663 - AluSx SINE Alu -15 297 2 1151 224 99 3 chr2 201024932 201025275 -52231308 + L1MC3 LINE L1 7380 7755 -30 22 56 0 0 chr2 201025291 201025327 -52231256 + AT_rich Low_complexity Low_complexity 1 36 0 218 203 8 102 chr2 201025501 201025619 -52230964 + A-rich Low_complexity Low_complexity 4 110 0 200 189 0 0 chr2 201026083 201026120 -52230463 + (CA)n Simple_repeat Simple_repeat 2 38 0 270 275 43 0 chr2 201028238 201028307 -52228276 - L2 LINE L2 -4 3309 3238 3677 153 36 4 chr2 201030874 201031549 -52225034 - L1MA4 LINE L1 -8 6292 5597 3111 181 40 5 chr2 201031554 201032128 -52224455 + MER6A DNA MER2_type 12 605 0 401 366 16 16 chr2 201032204 201032390 -52224193 - MIR SINE MIR -51 211 26 25 31 0 0 chr2 201032533 201032565 -52224018 + AT_rich Low_complexity Low_complexity 1 32 0 210 71 0 0 chr2 201032819 201032847 -52223736 + (TAA)n Simple_repeat Simple_repeat 2 29 0 30 27 0 0 chr2 201034090 201034127 -52222456 + AT_rich Low_complexity Low_complexity 1 37 0 342 326 109 1 chr2 201034153 201034282 -52222301 + MIR SINE MIR 21 157 -51 1139 327 69 50 chr2 201034757 201035584 -52220999 + L2 LINE L2 2253 3088 -225 1291 189 47 60 chr2 201037836 201037921 -52218662 - L1M4 LINE L1 -472 5702 5617 2132 121 0 3 chr2 201037921 201038226 -52218357 - AluSg SINE Alu -6 304 1 1291 189 47 60 chr2 201038226 201038505 -52218078 - L1M4 LINE L1 -557 5617 5343 204 233 35 35 chr2 201038533 201038619 -52217964 + (TAAA)n Simple_repeat Simple_repeat 3 88 0 279 320 46 25 chr2 201038691 201038888 -52217695 + L1ME LINE L1 5478 5678 -443 895 203 72 50 chr2 201038971 201039193 -52217390 + MSTC LTR MaLR 79 305 -123 780 141 50 0 chr2 201039198 201039319 -52217264 + FLAM_C SINE Alu 6 132 -11 580 168 0 28 chr2 201039332 201039439 -52217144 + MSTC LTR MaLR 321 424 -4 202 197 28 14 chr2 201039457 201039528 -52217055 + (TA)n Simple_repeat Simple_repeat 2 73 0 366 262 87 35 chr2 201040116 201040288 -52216295 - MIR SINE MIR -1 261 81 194 104 0 62 chr2 201041095 201041143 -52215440 + (TAAAAA)n Simple_repeat Simple_repeat 3 47 0 874 211 56 35 chr2 201041168 201041400 -52215183 + MLT1C LTR MaLR 1 237 -230 204 241 0 0 chr2 201041401 201041459 -52215124 + (CATA)n Simple_repeat Simple_repeat 3 60 0 249 167 24 0 chr2 201041512 201041554 -52215029 + MLT1C LTR MaLR 344 386 -4 625 184 0 0 chr2 201041573 201041687 -52214896 - MSTD LTR MaLR -282 114 1 471 35 0 0 chr2 201042603 201042660 -52213923 + (TA)n Simple_repeat Simple_repeat 1 57 0 3386 39 0 0 chr2 201042660 201043073 -52213510 - L1PA4 LINE L1 0 6155 5743 590 95 0 0 chr2 201044694 201044791 -52211792 + L1PA3 LINE L1 10 380 -6081 * 37224 34 27 1 chr2 201044758 201050193 -52206390 + L1PA3 LINE L1 893 6470 0 3062 121 0 11 chr2 201050631 201051095 -52205488 - L1PA13 LINE L1 -239 5929 5471 1706 104 0 8 chr2 201051095 201051330 -52205253 + L1PA13 LINE L1 5912 6159 -4 216 0 0 0 chr2 201051618 201051642 -52204941 + (CAAAT)n Simple_repeat Simple_repeat 1 24 0 262 183 28 0 chr2 201051911 201051982 -52204601 + (TA)n Simple_repeat Simple_repeat 2 74 0 26 30 0 0 chr2 201052136 201052169 -52204414 + AT_rich Low_complexity Low_complexity 1 33 0 26 30 0 0 chr2 201052236 201052269 -52204314 + AT_rich Low_complexity Low_complexity 1 33 0 234 0 0 0 chr2 201053191 201053217 -52203366 + (TTA)n Simple_repeat Simple_repeat 3 28 0 959 66 0 0 chr2 201053217 201053339 -52203244 - L1PA4 LINE L1 -18 6137 6016 400 176 24 0 chr2 201053895 201053980 -52202603 + MER61E LTR ERV1 1 87 -482 279 312 0 0 chr2 201054179 201054256 -52202327 + LTR28 LTR ERV1 147 223 -797 607 245 64 41 chr2 201054285 201054691 -52201892 + LTR25 LTR ERV1 350 1303 -10 919 201 0 26 chr2 201055512 201055701 -52200882 + MLT1A1 LTR MaLR 182 365 0 351 271 54 16 chr2 201055701 201055829 -52200754 - Charlie1a DNA MER1_type -1297 158 26 249 243 0 29 chr2 201057832 201057902 -52198681 - MARNA DNA Mariner -173 413 346 331 314 57 39 chr2 201058636 201058891 -52197692 + LTR16A LTR ERVL 187 456 -1 643 332 68 50 chr2 201058907 201059449 -52197134 + HERV16 LTR ERVL 18 574 -4422 3185 97 22 5 chr2 201059449 201059894 -52196689 + MLT2A2 LTR ERVL 1 453 0 643 332 68 50 chr2 201059894 201059969 -52196614 + HERV16 LTR ERVL 574 646 -4350 766 308 39 68 chr2 201060153 201060568 -52196015 + HERV16 LTR ERVL 930 1332 -3664 554 237 165 63 chr2 201060670 201061033 -52195550 + L1MEc LINE L1 1664 2063 -4333 1998 88 37 3 chr2 201061482 201061776 -52194807 + AluY SINE Alu 1 304 -7 194 240 87 87 chr2 201061924 201062028 -52194555 - MIR SINE MIR -41 221 118 370 291 139 18 chr2 201062388 201062553 -52194030 - L2 LINE L2 -6 3307 3123 215 242 129 0 chr2 201062784 201062846 -52193737 + MIR3 SINE MIR 92 161 -47 1212 168 12 52 chr2 201062879 201063129 -52193454 - AluJo SINE Alu -38 274 35 27 29 0 0 chr2 201063530 201063564 -52193019 + AT_rich Low_complexity Low_complexity 1 34 0 23 0 0 0 chr2 201063599 201063622 -52192961 + AT_rich Low_complexity Low_complexity 1 23 0 1743 123 36 0 chr2 201063933 201064185 -52192398 + AluSc SINE Alu 48 308 -1 7191 57 9 1 chr2 201064427 201066179 -52190404 - L1PA8 LINE L1 -4 6168 4408 30 59 0 0 chr2 201066523 201066574 -52190009 + AT_rich Low_complexity Low_complexity 1 51 0 42766 32 22 1 chr2 201066966 201072994 -52183589 - L1HS LINE L1 0 6155 1 21 0 0 0 chr2 201073643 201073664 -52182919 + AT_rich Low_complexity Low_complexity 1 21 0 206 174 22 0 chr2 201073792 201073838 -52182745 + (TA)n Simple_repeat Simple_repeat 1 47 0 233 197 0 0 chr2 201073851 201073912 -52182671 - L1MC4 LINE L1 -1339 6703 6643 213 415 71 27 chr2 201074595 201074778 -52181805 - L2 LINE L2 -180 3092 2902 1935 129 26 7 chr2 201075880 201076182 -52180401 - AluSg SINE Alu 0 310 3 2108 84 7 7 chr2 201076323 201076620 -52179963 + L1PA7 LINE L1 5858 6154 0 26 0 0 0 chr2 201076722 201076748 -52179835 + AT_rich Low_complexity Low_complexity 1 26 0 325 306 36 0 chr2 201076847 201076958 -52179625 + MIR SINE MIR 139 253 -9 3356 220 40 18 chr2 201078414 201079872 -52176711 - L1MB7 LINE L1 -8 6987 5507 1331 219 61 150 chr2 201079872 201080479 -52176104 - MLT2B3 LTR ERVL 0 554 2 1587 250 77 21 chr2 201080509 201081236 -52175347 - L1MB7 LINE L1 -2734 4223 3456 26 50 0 0 chr2 201081425 201081465 -52175118 + AT_rich Low_complexity Low_complexity 1 40 0 1684 279 97 27 chr2 201081501 201082438 -52174145 - L1MB7 LINE L1 -4543 2416 1414 3590 189 95 23 chr2 201082438 201083225 -52173358 + MER21B LTR ERV1 1 844 -19 1720 318 55 11 chr2 201083270 201083937 -52172646 - L1MB7 LINE L1 -6023 836 140 22 0 0 0 chr2 201083965 201083987 -52172596 + AT_rich Low_complexity Low_complexity 1 22 0 1691 253 67 31 chr2 201084065 201084155 -52172428 - L1M4 LINE L1 -1834 4312 4227 345 47 0 0 chr2 201084155 201084198 -52172385 + (TG)n Simple_repeat Simple_repeat 2 44 0 1691 253 67 31 chr2 201084198 201084747 -52171836 - L1M4 LINE L1 -1919 4227 3650 34 65 0 0 chr2 201084772 201084834 -52171749 + AT_rich Low_complexity Low_complexity 1 62 0 21 0 0 0 chr2 201085482 201085503 -52171080 + AT_rich Low_complexity Low_complexity 1 21 0 588 342 53 44 chr2 201085554 201085990 -52170593 - L1MEd LINE L1 -5408 711 272 3393 217 60 12 chr2 201086630 201087567 -52169016 + L1MA10 LINE L1 3020 4001 -2145 2973 207 34 58 chr2 201087575 201088814 -52167769 + L1MA10 LINE L1 4626 5812 -522 2143 121 3 7 chr2 201088814 201089120 -52167463 + AluSc SINE Alu 1 305 -4 2973 207 34 58 chr2 201089120 201089630 -52166953 + L1MA10 LINE L1 5812 6333 -1 28 0 0 0 chr2 201091396 201091424 -52165159 + AT_rich Low_complexity Low_complexity 1 28 0 614 216 0 0 chr2 201092358 201092492 -52164091 + L1MA5A LINE L1 6161 6294 -3 23 0 0 0 chr2 201092715 201092738 -52163845 + AT_rich Low_complexity Low_complexity 1 23 0 1588 160 8 0 chr2 201093313 201093581 -52163002 - MER47A DNA MER2_type -23 343 74 2034 212 125 14 chr2 201093841 201094360 -52162223 - L1MC3 LINE L1 -17 7768 7192 238 231 66 44 chr2 201094370 201094461 -52162122 - MLT1H LTR MaLR -382 167 75 359 220 46 0 chr2 201094461 201094570 -52162013 - L1MC3 LINE L1 -692 7093 6980 1223 264 62 42 chr2 201094582 201095339 -52161244 - L1MCa LINE L1 -4849 1196 607 284 318 14 57 chr2 201095528 201095739 -52160844 - L1MCa LINE L1 -5803 761 560 785 251 77 107 chr2 201095976 201096314 -52160269 - L1MCa LINE L1 -5749 475 65 248 219 41 0 chr2 201096383 201096456 -52160127 - L1MCa LINE L1 -4355 2071 1996 263 260 0 30 chr2 201096467 201096567 -52160016 + L1MC4 LINE L1 6614 6710 -1332 286 341 29 41 chr2 201096567 201096737 -52159846 + MIR SINE MIR 94 261 -1 1579 208 56 3 chr2 201097599 201097940 -52158643 + MLT1B LTR MaLR 2 360 -30 438 218 0 0 chr2 201098044 201098154 -52158429 + C-rich Low_complexity Low_complexity 1 110 0 2089 121 7 0 chr2 201098208 201098515 -52158068 + AluSx SINE Alu 1 309 -3 225 132 0 0 chr2 201098520 201098558 -52158025 + (GAAA)n Simple_repeat Simple_repeat 3 40 0 499 316 5 19 chr2 201098561 201098776 -52157807 + L1M4 LINE L1 5366 5577 -597 23 86 0 0 chr2 201099018 201099076 -52157507 + AT_rich Low_complexity Low_complexity 1 58 0 212 133 89 22 chr2 201099246 201099291 -52157292 + L2 LINE L2 3264 3311 -2 512 300 37 16 chr2 201099348 201099538 -52157045 - MIR SINE MIR -1 261 68 267 114 0 0 chr2 201099558 201099602 -52156981 + (CA)n Simple_repeat Simple_repeat 2 45 0 23 0 0 0 chr2 201100053 201100076 -52156507 + AT_rich Low_complexity Low_complexity 1 23 0 1500 222 24 29 chr2 201100096 201100256 -52156327 + L1MC3 LINE L1 6705 6864 -921 186 103 0 0 chr2 201100256 201100285 -52156298 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1500 222 24 29 chr2 201100285 201100534 -52156049 + L1MC3 LINE L1 6864 7112 -673 278 194 28 69 chr2 201100538 201100610 -52155973 + MLT1F1 LTR MaLR 57 125 -442 578 170 27 0 chr2 201100616 201100728 -52155855 + L1MC3 LINE L1 7196 7310 -475 659 219 114 20 chr2 201100867 201101179 -52155404 + L1M4b LINE L1 1391 1906 -5232 893 203 6 16 chr2 201101796 201101978 -52154605 - FRAM SINE Alu -1 175 1 21 0 0 0 chr2 201102985 201103006 -52153577 + AT_rich Low_complexity Low_complexity 1 21 0 892 304 148 39 chr2 201103423 201104045 -52152538 + L2 LINE L2 1717 2406 -908 1490 214 68 28 chr2 201104047 201104486 -52152097 - MLT1C LTR MaLR -7 451 1 553 345 131 21 chr2 201104493 201105247 -52151336 + L2 LINE L2 2397 3313 0 2346 65 14 0 chr2 201106345 201106637 -52149946 + AluSp SINE Alu 1 296 -17 246 128 0 0 chr2 201106884 201106923 -52149660 + (TG)n Simple_repeat Simple_repeat 2 40 0 4259 102 10 0 chr2 201106934 201107551 -52149032 - L1PA13 LINE L1 -3 6160 5538 2048 218 31 6 chr2 201107756 201108353 -52148230 - MLT1B-int LTR MaLR -639 732 1 1211 235 46 49 chr2 201108353 201108744 -52147839 - MLT1B LTR MaLR 0 390 1 21 36 0 0 chr2 201109072 201109100 -52147483 + AT_rich Low_complexity Low_complexity 1 28 0 232 223 19 39 chr2 201109197 201109300 -52147283 + (TA)n Simple_repeat Simple_repeat 2 102 0 258 32 0 0 chr2 201109308 201109339 -52147244 + (CA)n Simple_repeat Simple_repeat 1 31 0 258 192 0 0 chr2 201109447 201109499 -52147084 - L1M3 LINE L1 -428 6563 6512 300 276 62 35 chr2 201109780 201109925 -52146658 - L1M3 LINE L1 -754 6203 6055 522 297 87 56 chr2 201109971 201110846 -52145737 - L1M3 LINE L1 -984 5973 5036 29 0 0 0 chr2 201111017 201111046 -52145537 + AT_rich Low_complexity Low_complexity 1 29 0 287 276 31 94 chr2 201111064 201111318 -52145265 - L1M3 LINE L1 -2194 4763 4526 451 297 131 14 chr2 201111553 201111843 -52144740 - L1M3 LINE L1 -2685 4272 3949 322 271 127 18 chr2 201111846 201112012 -52144571 + LTR41 LTR ERVL 4 187 -586 408 285 94 34 chr2 201112578 201112845 -52143738 - L1M3 LINE L1 -3007 3950 3668 297 315 60 20 chr2 201113008 201113157 -52143426 - L2 LINE L2 -144 3169 3015 21 0 0 0 chr2 201113439 201113460 -52143123 + AT_rich Low_complexity Low_complexity 1 21 0 1516 209 0 10 chr2 201113516 201113808 -52142775 + AluJo SINE Alu 1 289 -23 1906 165 0 3 chr2 201114004 201114301 -52142282 + AluJb SINE Alu 3 298 -14 21 0 0 0 chr2 201114665 201114686 -52141897 + AT_rich Low_complexity Low_complexity 1 21 0 301 295 0 32 chr2 201116222 201116317 -52140266 - L1M3 LINE L1 -5422 1437 1346 304 338 30 51 chr2 201116819 201117056 -52139527 - L1MEc LINE L1 -6090 306 75 26 74 0 0 chr2 201117502 201117556 -52139027 + AT_rich Low_complexity Low_complexity 1 54 0 247 360 36 29 chr2 201118297 201118436 -52138147 + MIR SINE MIR 2 141 -121 6612 55 1 5 chr2 201118721 201119560 -52137023 - L1PA7 LINE L1 0 6154 5319 795 203 100 148 chr2 201119562 201120050 -52136533 - MLT1C LTR MaLR 0 467 3 180 77 0 0 chr2 201121496 201121522 -52135061 + (CA)n Simple_repeat Simple_repeat 2 27 0 349 257 0 0 chr2 201121847 201121917 -52134666 - FRAM/FAM SINE Alu -99 67 1 656 68 0 0 chr2 201121917 201122005 -52134578 - L1PA7 LINE L1 -5 6149 6062 4852 68 3 0 chr2 201122005 201122632 -52133951 - L1PA7 LINE L1 -19 6135 5505 469 270 97 65 chr2 201122734 201123075 -52133508 + L1MB1 LINE L1 266 617 -6029 748 264 53 26 chr2 201123220 201123523 -52133060 + L1MB1 LINE L1 825 1135 -5407 653 256 55 11 chr2 201123503 201123777 -52132806 + L1MB1 LINE L1 4262 4547 -2097 * 388 180 20 0 chr2 201123752 201123852 -52132731 + L1MB1 LINE L1 5458 5559 -1085 * 748 278 21 24 chr2 201123881 201124172 -52132411 + L1PB2 LINE L1 5647 5936 -215 * 2444 183 41 10 chr2 201123918 201124410 -52132173 + L1MB1 LINE L1 5681 6187 -2 2396 192 54 8 chr2 201124425 201125243 -52131340 + L1M2 LINE L1 5105 5775 -516 2557 210 10 36 chr2 201125258 201125839 -52130744 + L1MB5 LINE L1 5597 6162 -12 2179 101 17 0 chr2 201126021 201126309 -52130274 + AluSp SINE Alu 1 293 -20 21 0 0 0 chr2 201126383 201126404 -52130179 + AT_rich Low_complexity Low_complexity 1 21 0 237 235 0 0 chr2 201128025 201128110 -52128473 + (TA)n Simple_repeat Simple_repeat 1 85 0 24 0 0 0 chr2 201128238 201128262 -52128321 + AT_rich Low_complexity Low_complexity 1 24 0 207 0 0 0 chr2 201128817 201128840 -52127743 + (TA)n Simple_repeat Simple_repeat 2 24 0 1882 130 0 0 chr2 201128840 201129109 -52127474 - AluSx SINE Alu -5 307 39 1238 239 68 20 chr2 201129467 201129822 -52126761 + MLT1A2 LTR MaLR 1 372 -2 459 71 129 0 chr2 201130097 201130167 -52126416 - MADE1 DNA Mariner -1 79 1 207 100 0 0 chr2 201131740 201131770 -52124813 + (T)n Simple_repeat Simple_repeat 1 30 0 606 109 0 0 chr2 201132094 201132186 -52124397 + (GGAA)n Simple_repeat Simple_repeat 4 95 0 33 66 0 0 chr2 201132841 201132902 -52123681 + AT_rich Low_complexity Low_complexity 1 61 0 1677 172 9 26 chr2 201132911 201133260 -52123323 + L1PB4 LINE L1 5808 6150 -6 208 121 52 0 chr2 201133433 201133491 -52123092 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 2018 129 3 0 chr2 201133493 201133779 -52122804 - AluSg SINE Alu -23 287 1 200 91 23 45 chr2 201133814 201133858 -52122725 + (TAAA)n Simple_repeat Simple_repeat 4 46 0 21 0 0 0 chr2 201134327 201134348 -52122235 + AT_rich Low_complexity Low_complexity 1 21 0 1346 171 4 19 chr2 201135319 201135576 -52121007 - L1PA15 LINE L1 -3 6162 5910 24 67 0 0 chr2 201136124 201136169 -52120414 + AT_rich Low_complexity Low_complexity 1 45 0 536 311 16 21 chr2 201136909 201137102 -52119481 + L2 LINE L2 3121 3312 -1 240 274 0 0 chr2 201137124 201137175 -52119408 + MIR SINE MIR 102 152 -110 466 139 13 0 chr2 201137231 201137310 -52119273 + MADE1 DNA Mariner 1 80 0 23 0 0 0 chr2 201138087 201138110 -52118473 + AT_rich Low_complexity Low_complexity 1 23 0 255 276 96 6 chr2 201138452 201138608 -52117975 + L1MC5 LINE L1 7274 7443 -518 235 188 29 16 chr2 201138608 201138681 -52117902 - LTR16C LTR ERVL 0 491 385 360 311 0 0 chr2 201138771 201138874 -52117709 - LTR16C LTR ERVL -191 300 198 425 276 22 8 chr2 201139157 201139291 -52117292 + L1MA10 LINE L1 6199 6334 0 253 245 51 71 chr2 201139297 201139493 -52117090 + L1MC5 LINE L1 7503 7694 -267 1609 182 0 34 chr2 201139543 201139839 -52116744 - AluJb SINE Alu -24 288 3 27 0 0 0 chr2 201140195 201140222 -52116361 + AT_rich Low_complexity Low_complexity 1 27 0 958 205 19 14 chr2 201140525 201140740 -52115843 - AluJo SINE Alu -43 269 54 25 65 0 0 chr2 201140751 201140797 -52115786 + AT_rich Low_complexity Low_complexity 1 46 0 231 100 0 0 chr2 201141971 201142011 -52114572 - AluSq SINE Alu 0 308 269 985 74 0 0 chr2 201142011 201142133 -52114450 - AluSq SINE Alu -88 225 104 1693 109 8 0 chr2 201142135 201142391 -52114192 - MSTB-int LTR MaLR -1393 258 1 503 151 0 54 chr2 201142391 201142484 -52114099 - MSTB LTR MaLR 0 426 339 2116 118 0 0 chr2 201142528 201142817 -52113766 + AluSg SINE Alu 11 299 -11 342 0 0 0 chr2 201143117 201143155 -52113428 + (TA)n Simple_repeat Simple_repeat 2 39 0 197 319 0 28 chr2 201143315 201143387 -52113196 - L2 LINE L2 0 3313 3244 219 339 184 0 chr2 201143722 201143831 -52112752 + MIR SINE MIR 57 185 -77 1855 216 81 0 chr2 201144137 201144531 -52112052 - MSTB LTR MaLR 0 426 1 8501 194 28 8 chr2 201144543 201146143 -52110440 - MSTB-int LTR MaLR -14 1637 6 2063 197 52 12 chr2 201146148 201146554 -52110029 - MSTB LTR MaLR 0 426 5 21 0 0 0 chr2 201147299 201147320 -52109263 + AT_rich Low_complexity Low_complexity 1 21 0 39 68 0 0 chr2 201147355 201147429 -52109154 + AT_rich Low_complexity Low_complexity 1 74 0 470 329 6 6 chr2 201147634 201147792 -52108791 - LTR33 LTR ERVL -8 513 356 205 174 55 64 chr2 201147983 201148005 -52108578 + (TAAA)n Simple_repeat Simple_repeat 1 22 -86 2043 96 0 0 chr2 201148005 201148275 -52108308 + AluY SINE Alu 39 308 -3 205 174 55 64 chr2 201148275 201148361 -52108222 + (TAAA)n Simple_repeat Simple_repeat 22 108 0 21 0 0 0 chr2 201148864 201148885 -52107698 + AT_rich Low_complexity Low_complexity 1 21 0 384 236 193 14 chr2 201149696 201149836 -52106747 + LTR41 LTR ERVL 1 165 -608 440 131 0 12 chr2 201150915 201150999 -52105584 + (TCC)n Simple_repeat Simple_repeat 3 85 0 189 107 0 0 chr2 201151349 201151377 -52105206 + (T)n Simple_repeat Simple_repeat 1 28 0 2075 132 3 0 chr2 201152010 201152314 -52104269 + AluSx SINE Alu 1 305 -7 297 0 0 0 chr2 201153334 201153367 -52103216 + (TTCC)n Simple_repeat Simple_repeat 1 33 0 300 304 88 0 chr2 201153839 201153964 -52102619 - L1ME3A LINE L1 -13 6157 6022 23 33 0 0 chr2 201154084 201154114 -52102469 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr2 201154917 201154946 -52101637 + AT_rich Low_complexity Low_complexity 1 29 0 1182 198 28 49 chr2 201155399 201155545 -52101038 - AluJo SINE Alu -25 287 139 183 80 0 0 chr2 201155545 201155570 -52101013 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2155 106 0 3 chr2 201155570 201155853 -52100730 - AluSx SINE Alu -29 283 2 1182 198 28 49 chr2 201155853 201155993 -52100590 - AluJo SINE Alu -171 141 6 26 0 0 0 chr2 201156533 201156559 -52100024 + AT_rich Low_complexity Low_complexity 1 26 0 25 0 0 0 chr2 201156579 201156604 -52099979 + AT_rich Low_complexity Low_complexity 1 25 0 213 261 0 0 chr2 201157550 201157596 -52098987 + (TA)n Simple_repeat Simple_repeat 1 46 0 434 299 100 0 chr2 201157660 201157891 -52098692 + L1ME2 LINE L1 2335 2588 -3558 291 215 89 0 chr2 201157901 201157980 -52098603 + L1ME2 LINE L1 2626 2711 -3435 23 33 0 0 chr2 201158022 201158052 -52098531 + AT_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr2 201158127 201158153 -52098430 + AT_rich Low_complexity Low_complexity 1 26 0 1962 147 11 30 chr2 201158153 201158520 -52098063 - L1PB1 LINE L1 -8 6859 6500 312 172 0 0 chr2 201158521 201158579 -52098004 + (TA)n Simple_repeat Simple_repeat 2 59 0 14898 200 26 4 chr2 201158625 201162294 -52094289 - L1PB1 LINE L1 -365 6502 2692 189 0 0 0 chr2 201162294 201162315 -52094268 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 14898 200 26 4 chr2 201162315 201163481 -52093102 - L1PB1 LINE L1 -4175 2692 1554 2691 235 86 43 chr2 201163481 201164447 -52092136 - L1PB1 LINE L1 -5851 1012 6 2511 259 119 57 chr2 201164463 201165917 -52090666 + L1ME2 LINE L1 2750 4113 -2051 2212 116 3 0 chr2 201165917 201166227 -52090356 + AluSp SINE Alu 1 311 -2 2511 259 119 57 chr2 201166227 201167797 -52088786 + L1ME2 LINE L1 4113 5961 -203 6633 74 28 0 chr2 201168471 201169399 -52087184 - L1PA7 LINE L1 0 6154 5223 3453 100 0 10 chr2 201169404 201169913 -52086670 + L1P3 LINE L1 1224 1727 -4734 5318 88 3 17 chr2 201170038 201170804 -52085779 + L1P3 LINE L1 2271 3025 -3436 23 33 0 0 chr2 201171476 201171506 -52085077 + AT_rich Low_complexity Low_complexity 1 30 0 2046 97 21 0 chr2 201172334 201172639 -52083944 - AluSp SINE Alu 0 311 1 26 64 0 0 chr2 201173176 201173223 -52083360 + AT_rich Low_complexity Low_complexity 1 47 0 21 36 0 0 chr2 201173805 201173833 -52082750 + AT_rich Low_complexity Low_complexity 1 28 0 22 99 0 0 chr2 201174496 201174567 -52082016 + AT_rich Low_complexity Low_complexity 1 71 0 985 276 109 28 chr2 201174655 201175122 -52081461 + MLT1D LTR MaLR 1 505 0 664 271 42 33 chr2 201175318 201175532 -52081051 - MER20 DNA MER1_type 0 219 4 1316 299 105 15 chr2 201175598 201176130 -52080453 + MLT1G1 LTR MaLR 9 588 -7 201 246 0 0 chr2 201176216 201176281 -52080302 + CT-rich Low_complexity Low_complexity 3 67 0 28 107 0 0 chr2 201177616 201177728 -52078855 + AT_rich Low_complexity Low_complexity 1 112 0 742 233 88 9 chr2 201180309 201180524 -52076059 + AluJo SINE Alu 1 232 -80 405 252 47 16 chr2 201180627 201180754 -52075829 + AluJb SINE Alu 167 297 -15 31 0 0 0 chr2 201180756 201180787 -52075796 + AT_rich Low_complexity Low_complexity 1 31 0 39 0 0 0 chr2 201180923 201180962 -52075621 + AT_rich Low_complexity Low_complexity 1 39 0 445 244 47 8 chr2 201181032 201181159 -52075424 + FLAM_C SINE Alu 1 132 -1 201 158 0 0 chr2 201181884 201181922 -52074661 + T-rich Low_complexity Low_complexity 1 38 0 462 243 27 0 chr2 201182605 201182716 -52073867 + MER70B LTR ERVL 454 567 -11 1489 269 61 44 chr2 201182835 201183181 -52073402 + L1MCb LINE L1 924 1263 -5301 1699 80 134 19 chr2 201183181 201183443 -52073140 + AluSg1 SINE Alu 1 292 -17 1489 269 61 44 chr2 201183443 201183501 -52073082 + L1MCb LINE L1 1263 1319 -5245 2051 101 0 31 chr2 201183501 201183789 -52072794 + AluSc SINE Alu 21 299 -10 1489 269 61 44 chr2 201183789 201184286 -52072297 + L1MCb LINE L1 1319 1933 -4631 246 280 70 86 chr2 201184289 201184546 -52072037 - LTR36 LTR ERV1 0 611 359 386 246 8 41 chr2 201184768 201184890 -52071693 - LTR38B LTR ERV1 -492 118 1 946 267 94 48 chr2 201184893 201185541 -52071042 + L1MCb LINE L1 2037 2714 -4031 568 229 78 10 chr2 201185579 201185771 -52070812 + L1MC3 LINE L1 6020 6224 -1561 23 0 0 0 chr2 201186043 201186066 -52070517 + AT_rich Low_complexity Low_complexity 1 23 0 396 222 111 0 chr2 201186561 201186678 -52069905 + L2 LINE L2 1317 1446 -1868 582 304 118 17 chr2 201187414 201187651 -52068932 - MIR SINE MIR 0 262 2 24 32 0 0 chr2 201188211 201188242 -52068341 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr2 201188485 201188514 -52068069 + AT_rich Low_complexity Low_complexity 1 29 0 35 54 0 0 chr2 201189622 201189678 -52066905 + AT_rich Low_complexity Low_complexity 1 56 0 24 32 0 0 chr2 201189732 201189763 -52066820 + AT_rich Low_complexity Low_complexity 1 31 0 224 182 0 30 chr2 201189769 201189835 -52066748 + (TTTA)n Simple_repeat Simple_repeat 2 65 0 25 0 0 0 chr2 201189958 201189983 -52066600 + AT_rich Low_complexity Low_complexity 1 25 0 1504 183 56 20 chr2 201190024 201190379 -52066204 - THE1C LTR MaLR 0 375 8 2275 87 0 23 chr2 201190467 201190766 -52065817 + AluSg SINE Alu 1 292 -18 25 31 0 0 chr2 201190766 201190798 -52065785 + AT_rich Low_complexity Low_complexity 1 32 0 432 0 0 0 chr2 201190892 201190940 -52065643 + (TA)n Simple_repeat Simple_repeat 1 48 0 391 374 11 0 chr2 201191533 201191707 -52064876 - MER5B DNA MER1_type -1 177 2 3295 208 57 25 chr2 201191851 201192628 -52063955 - L1MB7 LINE L1 0 6184 5433 183 42 0 0 chr2 201192628 201192652 -52063931 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1482 108 0 10 chr2 201192652 201192856 -52063727 - AluSc SINE Alu -31 278 77 3295 208 57 25 chr2 201192856 201193166 -52063417 - L1MB7 LINE L1 -750 5434 5069 207 114 0 0 chr2 201193169 201193204 -52063379 + (CA)n Simple_repeat Simple_repeat 2 36 0 1868 145 49 19 chr2 201193211 201193536 -52063047 - MER2 DNA MER2_type -9 336 2 351 183 53 8 chr2 201193537 201193626 -52062957 - L1P5 LINE L1 -362 5789 5701 * 1507 209 85 66 chr2 201193620 201193981 -52062602 + L1MD3 LINE L1 7446 7822 -173 2015 170 75 8 chr2 201193981 201194382 -52062201 + MSTA LTR MaLR 1 428 0 1507 209 85 66 chr2 201194382 201194547 -52062036 + L1MD3 LINE L1 7822 7982 -13 235 70 23 23 chr2 201194782 201194825 -52061758 + (TA)n Simple_repeat Simple_repeat 2 44 0 924 163 131 151 chr2 201195194 201195450 -52061133 - MLT1B LTR MaLR 0 390 143 2062 104 0 14 chr2 201195450 201195747 -52060836 - AluY SINE Alu -18 293 1 924 163 131 151 chr2 201195747 201195888 -52060695 - MLT1B LTR MaLR -247 143 1 1146 250 117 44 chr2 201196555 201197118 -52059465 - L1ME3A LINE L1 -6 6164 5561 230 280 0 0 chr2 201197163 201197213 -52059370 + MLT1G1 LTR MaLR 228 277 -318 525 252 90 7 chr2 201197296 201197451 -52059132 + MLT1G1 LTR MaLR 426 593 -2 1266 129 5 0 chr2 201198009 201198237 -52058346 - AluSp SINE Alu 0 318 90 770 300 14 21 chr2 201198237 201198520 -52058063 - L1ME1 LINE L1 -10 6225 5945 1185 234 139 76 chr2 201198569 201199866 -52056717 - L1ME1 LINE L1 -524 5711 4357 448 333 114 27 chr2 201200191 201200639 -52055944 - L1ME1 LINE L1 -5799 597 111 220 290 24 8 chr2 201200876 201201000 -52055583 + (TA)n Simple_repeat Simple_repeat 2 127 0 29 60 0 0 chr2 201201023 201201073 -52055510 + AT_rich Low_complexity Low_complexity 1 50 0 318 248 15 7 chr2 201202372 201202509 -52054074 + (TA)n Simple_repeat Simple_repeat 1 138 0 2088 106 3 0 chr2 201203061 201203343 -52053240 - AluSg SINE Alu -27 283 1 1173 137 0 0 chr2 201204621 201204796 -52051787 - AluSq SINE Alu -8 305 131 23 68 0 0 chr2 201204875 201204919 -52051664 + AT_rich Low_complexity Low_complexity 1 44 0 333 0 0 0 chr2 201205159 201205196 -52051387 + (TG)n Simple_repeat Simple_repeat 2 38 0 26 0 0 0 chr2 201205344 201205370 -52051213 + AT_rich Low_complexity Low_complexity 1 26 0 268 337 20 10 chr2 201206284 201206385 -52050198 + MIR3 SINE MIR 92 193 -15 258 32 0 0 chr2 201206588 201206619 -52049964 + (TC)n Simple_repeat Simple_repeat 2 32 0 * 351 0 0 0 chr2 201206618 201206657 -52049926 + (TG)n Simple_repeat Simple_repeat 2 40 0 43 35 0 0 chr2 201207365 201207422 -52049161 + AT_rich Low_complexity Low_complexity 1 57 0 324 331 23 23 chr2 201207455 201207588 -52048995 - MER5A DNA MER1_type -1 188 56 23 33 0 0 chr2 201207824 201207854 -52048729 + AT_rich Low_complexity Low_complexity 1 30 0 31 58 0 0 chr2 201208355 201208407 -52048176 + AT_rich Low_complexity Low_complexity 1 52 0 2082 163 25 89 chr2 201208832 201209359 -52047224 - L1MA10 LINE L1 -3 6331 5839 25 31 0 0 chr2 201209921 201209953 -52046630 + AT_rich Low_complexity Low_complexity 1 32 0 217 214 18 36 chr2 201210606 201210662 -52045921 + L2 LINE L2 3193 3247 -25 750 145 8 0 chr2 201210812 201210943 -52045640 - MER41B LTR ERV1 -1 634 503 2361 73 3 10 chr2 201210944 201211279 -52045304 + AluY SINE Alu 1 333 0 21 57 0 0 chr2 201211662 201211697 -52044886 + GC_rich Low_complexity Low_complexity 1 35 0 29 70 0 0 chr2 201211761 201211818 -52044765 + GC_rich Low_complexity Low_complexity 1 57 0 234 0 0 0 chr2 201211908 201211934 -52044649 + (A)n Simple_repeat Simple_repeat 1 26 0 2908 94 75 0 chr2 201211934 201212350 -52044233 - MER41A LTR ERV1 -107 447 1 186 71 0 0 chr2 201212979 201213007 -52043576 + (CAATT)n Simple_repeat Simple_repeat 4 31 0 225 211 0 0 chr2 201213128 201213180 -52043403 + (TATATG)n Simple_repeat Simple_repeat 5 56 0 2111 125 0 0 chr2 201213393 201213688 -52042895 + AluSg SINE Alu 1 295 -15 23 54 0 0 chr2 201213816 201213853 -52042730 + AT_rich Low_complexity Low_complexity 1 37 0 316 254 85 8 chr2 201214402 201214520 -52042063 + L1MCc LINE L1 11 137 -6286 407 320 100 10 chr2 201214592 201214792 -52041791 + L1MCc LINE L1 235 452 -5971 593 343 68 28 chr2 201215141 201215672 -52040911 + L1MCc LINE L1 981 1532 -4891 600 283 99 83 chr2 201215728 201216447 -52040136 + L1MCc LINE L1 1802 2549 -4573 218 79 0 26 chr2 201216447 201216485 -52040098 + (CA)n Simple_repeat Simple_repeat 2 38 0 600 283 99 83 chr2 201216485 201216970 -52039613 + L1MCc LINE L1 2549 3025 -4097 237 33 0 0 chr2 201217010 201217040 -52039543 + (CA)n Simple_repeat Simple_repeat 2 31 0 1950 129 24 0 chr2 201217066 201217353 -52039230 + AluSg SINE Alu 1 294 -16 768 177 5 59 chr2 201217360 201217546 -52039037 - FRAM SINE Alu 0 176 1 653 287 83 0 chr2 201217546 201217835 -52038748 + L1MCc LINE L1 3056 3368 -3573 287 324 0 0 chr2 201217836 201217941 -52038642 + L1MCc LINE L1 3456 3560 -3381 31 26 0 0 chr2 201218607 201218645 -52037938 + AT_rich Low_complexity Low_complexity 1 38 0 243 0 0 0 chr2 201219780 201219807 -52036776 + (TG)n Simple_repeat Simple_repeat 2 28 0 27 73 0 0 chr2 201220043 201220098 -52036485 + AT_rich Low_complexity Low_complexity 1 55 0 359 313 53 0 chr2 201220964 201221114 -52035469 - MLT1J1 LTR MaLR -286 160 3 23 97 0 0 chr2 201221457 201221529 -52035054 + AT_rich Low_complexity Low_complexity 1 72 0 963 229 45 98 chr2 201221532 201222065 -52034518 - MLT1D LTR MaLR 0 505 1 24 67 0 0 chr2 201222153 201222198 -52034385 + AT_rich Low_complexity Low_complexity 1 45 0 21 116 0 0 chr2 201222270 201222382 -52034201 + AT_rich Low_complexity Low_complexity 1 112 0 1516 117 8 12 chr2 201222426 201222674 -52033909 - L1PB1 LINE L1 -128 6023 5777 383 291 41 19 chr2 201223904 201224100 -52032483 - LTR33 LTR ERVL 0 523 321 21 0 0 0 chr2 201224371 201224392 -52032191 + AT_rich Low_complexity Low_complexity 1 21 0 22 70 0 0 chr2 201224680 201224723 -52031860 + AT_rich Low_complexity Low_complexity 1 43 0 25 83 0 0 chr2 201224878 201224938 -52031645 + AT_rich Low_complexity Low_complexity 1 60 0 1532 171 25 14 chr2 201224999 201225280 -52031303 - AluJb SINE Alu -21 291 8 610 245 100 104 chr2 201225591 201226093 -52030490 + MLT1D LTR MaLR 6 505 0 385 307 26 2 chr2 201226410 201226553 -52030030 - LTR16A1 LTR ERVL 0 491 308 417 316 72 0 chr2 201227741 201227893 -52028690 + MIR SINE MIR 72 234 -28 230 89 22 0 chr2 201228072 201228117 -52028466 - L1MD2 LINE L1 0 6359 6314 * 6304 237 75 47 chr2 201228111 201230745 -52025838 - L1MD1 LINE L1 -133 6503 3719 2230 93 7 3 chr2 201230745 201231047 -52025536 - AluSc SINE Alu -6 303 1 6304 237 75 47 chr2 201231047 201232662 -52023921 - L1MD1 LINE L1 -2917 3719 2150 2224 207 75 19 chr2 201232657 201233233 -52023350 - L1MD1 LINE L1 -4935 1605 998 * 966 270 26 37 chr2 201233254 201233524 -52023059 - L1MD1 LINE L1 -5597 943 677 * 1860 239 34 9 chr2 201233519 201233958 -52022625 + L1MDa LINE L1 25 474 -6066 215 141 26 51 chr2 201234694 201234772 -52021811 + (TATAA)n Simple_repeat Simple_repeat 2 77 0 26 50 0 0 chr2 201234980 201235020 -52021563 + AT_rich Low_complexity Low_complexity 1 40 0 22 35 0 0 chr2 201235179 201235208 -52021375 + AT_rich Low_complexity Low_complexity 1 29 0 207 0 0 0 chr2 201235967 201235990 -52020593 + (TC)n Simple_repeat Simple_repeat 2 24 0 1679 201 0 7 chr2 201236231 201236529 -52020054 - AluJb SINE Alu -16 296 1 517 302 94 5 chr2 201236689 201236901 -52019682 - MIR SINE MIR -30 232 2 236 304 43 0 chr2 201237426 201237518 -52019065 + MER46C DNA MER2_type 103 198 -140 236 241 7 146 chr2 201237614 201237751 -52018832 + L2 LINE L2 2612 2729 -585 1377 170 70 68 chr2 201238040 201238417 -52018166 - MER67C LTR ERV1 -243 271 1 229 250 0 0 chr2 201238897 201238949 -52017634 + LTR30 LTR ERV1 1 52 -670 656 182 93 89 chr2 201238949 201239174 -52017409 + LTR12 LTR ERV1 53 278 -436 290 281 10 0 chr2 201239175 201239271 -52017312 + LTR30 LTR ERV1 546 642 -80 704 130 0 0 chr2 201239273 201239373 -52017210 + LTR12 LTR ERV1 481 580 -134 208 282 84 99 chr2 201240564 201240777 -52015806 + L2 LINE L2 3104 3313 0 1596 91 13 9 chr2 201241681 201241912 -52014671 + L1PA8 LINE L1 5939 6170 -2 279 204 152 20 chr2 201241936 201242048 -52014535 + MLT1C LTR MaLR 222 421 -46 189 0 0 0 chr2 201242052 201242073 -52014510 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 210 174 22 0 chr2 201242399 201242445 -52014138 + (TCTCTG)n Simple_repeat Simple_repeat 2 48 0 180 97 0 0 chr2 201244119 201244150 -52012433 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 23 54 0 0 chr2 201244585 201244622 -52011961 + AT_rich Low_complexity Low_complexity 1 37 0 5370 133 35 18 chr2 201246085 201247280 -52009303 - L1PA16 LINE L1 -9 6157 4943 299 256 136 16 chr2 201248110 201248235 -52008348 - MLT1J2 LTR MaLR -32 418 279 21 0 0 0 chr2 201248282 201248303 -52008280 + AT_rich Low_complexity Low_complexity 1 21 0 1953 155 10 0 chr2 201249223 201249532 -52007051 + AluSx SINE Alu 1 312 0 293 199 48 20 chr2 201250111 201250257 -52006326 + (TA)n Simple_repeat Simple_repeat 1 150 0 195 129 0 0 chr2 201250426 201250457 -52006126 + (G)n Simple_repeat Simple_repeat 1 31 0 27 92 0 0 chr2 201250463 201250539 -52006044 + AT_rich Low_complexity Low_complexity 1 76 0 21 71 0 0 chr2 201251021 201251063 -52005520 + AT_rich Low_complexity Low_complexity 1 42 0 22 35 0 0 chr2 201252594 201252623 -52003960 + AT_rich Low_complexity Low_complexity 1 29 0 1395 253 19 13 chr2 201253070 201253442 -52003141 - MLT1A2 LTR MaLR 0 374 1 503 224 97 42 chr2 201254052 201254311 -52002272 - MER33 DNA MER1_type -8 316 44 1490 118 9 0 chr2 201254343 201254572 -52002011 + L1MA1 LINE L1 6072 6302 0 244 188 0 21 chr2 201254603 201254651 -52001932 + MER3 DNA MER1_type 155 201 -8 186 43 0 0 chr2 201255647 201255670 -52000913 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1192 228 64 40 chr2 201256227 201256604 -51999979 + MLT1B LTR MaLR 1 386 -4 8586 127 24 15 chr2 201257242 201258639 -51997944 - L1PA8A LINE L1 -762 5384 3975 5248 102 1 0 chr2 201258628 201259356 -51997227 + L1PA8A LINE L1 5393 6121 -10 * 468 0 0 0 chr2 201261782 201261834 -51994749 + (GAAA)n Simple_repeat Simple_repeat 1 52 0 185 314 0 0 chr2 201262227 201262278 -51994305 + L2 LINE L2 3210 3260 -12 1486 61 0 0 chr2 201262295 201262475 -51994108 - AluY SINE Alu -22 289 110 713 203 142 5 chr2 201263003 201263215 -51993368 + AluSg SINE Alu 58 298 -12 1007 281 116 50 chr2 201263239 201263824 -51992759 - L2 LINE L2 -21 3292 2660 2335 88 3 0 chr2 201263824 201264129 -51992454 + AluSx SINE Alu 1 306 -6 1007 281 116 50 chr2 201264129 201264263 -51992320 - L2 LINE L2 -653 2660 2536 1078 124 22 45 chr2 201268589 201268767 -51987816 + AluJb SINE Alu 1 174 -138 968 158 67 0 chr2 201268780 201268945 -51987638 + AluSg/x SINE Alu 119 294 -16 209 119 24 0 chr2 201268948 201268990 -51987593 + (TA)n Simple_repeat Simple_repeat 1 43 0 1366 117 28 0 chr2 201270066 201270280 -51986303 - AluSx SINE Alu -92 220 1 257 173 0 0 chr2 201270687 201270739 -51985844 - MLT1A2-int LTR MaLR -254 1481 1430 2247 161 5 29 chr2 201270752 201271163 -51985420 + L1PA16 LINE L1 5750 6150 -16 257 185 37 0 chr2 201271277 201271331 -51985252 - MER4-int LTR ERV1 -5434 1164 1109 1501 210 121 21 chr2 201272008 201272431 -51984152 + MLT1C LTR MaLR 1 465 -2 25 0 0 0 chr2 201272657 201272682 -51983901 + AT_rich Low_complexity Low_complexity 1 25 0 229 389 102 52 chr2 201272746 201273150 -51983433 + L2 LINE L2 2848 3271 -1 28 29 0 0 chr2 201273312 201273347 -51983236 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr2 201273376 201273405 -51983178 + AT_rich Low_complexity Low_complexity 1 29 0 2039 91 0 44 chr2 201274637 201274935 -51981648 - AluSc SINE Alu -24 285 1 901 205 38 71 chr2 201276976 201277215 -51979368 + MLT1D LTR MaLR 273 503 -2 261 235 123 0 chr2 201278323 201278404 -51978179 - MER63 DNA MER1_type 0 1061 971 * 301 250 0 0 chr2 201278391 201278451 -51978132 - MER63 DNA MER1_type -320 740 681 496 259 25 70 chr2 201278507 201278750 -51977833 + L1ME1 LINE L1 5745 5976 -190 433 244 25 38 chr2 201278852 201279012 -51977571 + L1MA10 LINE L1 6177 6334 0 701 236 48 14 chr2 201279033 201279331 -51977252 + L1ME1 LINE L1 5175 5480 -686 929 206 62 93 chr2 201279335 201279656 -51976927 - MLT1B LTR MaLR 0 390 80 451 189 21 21 chr2 201279727 201279822 -51976761 - MLT1B LTR MaLR -295 95 1 1131 233 83 93 chr2 201279822 201280426 -51976157 + L1ME1 LINE L1 5480 6077 -89 888 335 51 38 chr2 201280515 201281047 -51975536 - L2 LINE L2 -688 2626 2088 248 339 41 8 chr2 201281833 201281954 -51974629 - L3 LINE CR1 -278 1299 1175 454 318 55 65 chr2 201282631 201282828 -51973755 - L1ME LINE L1 -479 5683 5486 2098 175 13 53 chr2 201282828 201283280 -51973303 - Tigger2a DNA MER2_type 0 434 1 454 318 55 65 chr2 201283280 201283449 -51973134 - L1ME LINE L1 -676 5486 5319 814 106 113 0 chr2 201283449 201283591 -51972992 + L1MA3 LINE L1 6148 6305 0 454 318 55 65 chr2 201283591 201283623 -51972960 - L1ME LINE L1 -843 5319 5288 5512 157 53 16 chr2 201283671 201285034 -51971549 - L1PB4 LINE L1 -3 6153 4715 3676 86 0 25 chr2 201285034 201285558 -51971025 - MER9 LTR ERVK 0 511 1 5512 157 53 16 chr2 201285558 201285744 -51970839 - L1PB4 LINE L1 -1441 4715 4537 33 43 0 0 chr2 201285808 201285855 -51970728 + AT_rich Low_complexity Low_complexity 1 47 0 252 137 0 41 chr2 201286112 201286185 -51970398 + (TA)n Simple_repeat Simple_repeat 2 71 0 200 163 0 20 chr2 201286403 201286452 -51970131 + GA-rich Low_complexity Low_complexity 2 49 0 416 331 69 0 chr2 201286679 201286854 -51969729 + MIR SINE MIR 65 251 -11 3905 226 45 47 chr2 201287671 201287759 -51968824 + L1MC3 LINE L1 5606 5693 -2092 1518 176 17 30 chr2 201287759 201288055 -51968528 + AluJo SINE Alu 1 292 -20 3905 226 45 47 chr2 201288055 201289005 -51967578 + L1MC3 LINE L1 5693 6644 -1141 204 40 0 0 chr2 201289005 201289030 -51967553 + (TAGA)n Simple_repeat Simple_repeat 1 25 0 3905 226 45 47 chr2 201289030 201289249 -51967334 + L1MC3 LINE L1 6644 6862 -923 2432 223 87 16 chr2 201289256 201289902 -51966681 + L1MC3 LINE L1 7094 7785 0 3467 101 8 2 chr2 201291891 201292384 -51964199 + Harlequin LTR ERV1 4485 4980 -3419 2390 176 129 62 chr2 201292351 201293195 -51963388 + Harlequin LTR ERV1 840 1740 -5156 * 5328 105 5 15 chr2 201293193 201293975 -51962608 + Harlequin LTR ERV1 7626 8399 0 2031 74 221 203 chr2 201293975 201294546 -51962037 + LTR12 LTR ERV1 1 581 -133 288 282 95 22 chr2 201295538 201295725 -51960858 + MLT1J1 LTR MaLR 218 424 -22 219 186 0 0 chr2 201296215 201296258 -51960325 + (TA)n Simple_repeat Simple_repeat 1 43 0 1458 277 65 44 chr2 201296791 201297362 -51959221 - MER92B LTR ERV1 0 636 54 1709 261 74 9 chr2 201297378 201297707 -51958876 - L1MA9 LINE L1 -38 6274 5897 441 0 0 0 chr2 201297707 201297756 -51958827 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 1709 261 74 9 chr2 201297756 201297954 -51958629 - L1MA9 LINE L1 -415 5897 5713 360 158 0 0 chr2 201297954 201298011 -51958572 - MER92B LTR ERV1 -579 57 1 24 53 0 0 chr2 201298171 201298209 -51958374 + AT_rich Low_complexity Low_complexity 1 38 0 353 314 75 5 chr2 201298936 201299124 -51957459 + L1MEc LINE L1 38 238 -6158 430 328 40 27 chr2 201299510 201299885 -51956698 + L1MEc LINE L1 649 1028 -5368 1054 275 158 2 chr2 201299886 201300315 -51956268 + MLT1D LTR MaLR 2 497 -8 2691 212 32 31 chr2 201300326 201300984 -51955599 + MLT1D-int LTR MaLR 88 863 -508 1287 241 35 78 chr2 201301248 201301671 -51954912 + MLT1D-int LTR MaLR 961 1365 -6 774 250 170 91 chr2 201301764 201302111 -51954472 + MLT1C LTR MaLR 62 407 -60 1809 141 3 20 chr2 201302111 201302437 -51954146 - AluSq SINE Alu 0 313 1 774 250 170 91 chr2 201302437 201302500 -51954083 + MLT1C LTR MaLR 407 464 -3 1043 275 84 32 chr2 201302500 201302951 -51953632 + L1MEc LINE L1 1030 1533 -4863 3798 183 7 20 chr2 201302951 201303695 -51952888 - MER50 LTR ERV1 0 734 1 1043 275 84 32 chr2 201303695 201303959 -51952624 + L1MEc LINE L1 1533 1782 -4614 21 36 0 0 chr2 201304422 201304450 -51952133 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr2 201304796 201304819 -51951764 + AT_rich Low_complexity Low_complexity 1 23 0 404 201 26 34 chr2 201305118 201305272 -51951311 + MER3 DNA MER1_type 2 124 -85 445 291 148 10 chr2 201305316 201305512 -51951071 - MER58A DNA MER1_type 0 224 2 1789 278 80 30 chr2 201305640 201306112 -51950471 + L1M4 LINE L1 3692 4139 -2007 2227 99 0 10 chr2 201306112 201306416 -51950167 + AluY SINE Alu 1 301 -10 1789 278 80 30 chr2 201306416 201306923 -51949660 + L1M4 LINE L1 4139 4720 -1426 762 203 44 12 chr2 201307325 201307532 -51949051 + MER61D LTR ERV1 338 483 -18 3985 217 31 16 chr2 201307571 201308505 -51948078 + MER61D-int LTR ERV1 34 981 -6015 588 295 45 68 chr2 201308552 201309020 -51947563 + MER61D-int LTR ERV1 1153 1668 -5328 247 304 0 0 chr2 201309037 201309116 -51947467 + L1MC4 LINE L1 6614 6692 -1350 235 152 0 0 chr2 201309119 201309165 -51947418 + LTR66 LTR ERVL 394 439 -171 235 152 0 0 chr2 201309127 201309173 -51947410 - LTR66 LTR ERVL -171 439 394 249 139 0 0 chr2 201309178 201309221 -51947362 + (TG)n Simple_repeat Simple_repeat 2 44 0 515 192 34 22 chr2 201309223 201309367 -51947216 + MER61D-int LTR ERV1 1397 1749 -5247 5780 231 48 11 chr2 201309397 201309660 -51946923 + MER61D-int LTR ERV1 2166 2418 -4673 3599 103 4 6 chr2 201309660 201310172 -51946411 + MER9 LTR ERVK 1 511 0 5780 231 48 11 chr2 201310172 201311118 -51945465 + MER61D-int LTR ERV1 2418 3420 -3671 887 173 0 0 chr2 201311550 201311700 -51944883 + L1PA8A LINE L1 5972 6121 -10 22 0 0 0 chr2 201312434 201312456 -51944127 + AT_rich Low_complexity Low_complexity 1 22 0 35 24 0 0 chr2 201312667 201312709 -51943874 + AT_rich Low_complexity Low_complexity 1 42 0 12758 113 16 4 chr2 201314842 201317576 -51939007 + L1PA8A LINE L1 3364 6131 0 366 128 41 47 chr2 201317648 201317820 -51938763 + (TA)n Simple_repeat Simple_repeat 2 172 0 2043 253 30 13 chr2 201318032 201318498 -51938085 - MER70B LTR ERVL -102 476 3 182 352 11 11 chr2 201318554 201318645 -51937938 - MER5A DNA MER1_type -23 166 76 225 241 103 23 chr2 201318664 201318751 -51937832 - MIR SINE MIR -128 134 41 620 169 0 0 chr2 201318838 201318962 -51937621 - L1MA7 LINE L1 -4 6287 6164 274 179 0 26 chr2 201318964 201319042 -51937541 + (TA)n Simple_repeat Simple_repeat 2 77 0 3668 191 16 14 chr2 201319326 201320151 -51936432 - L1MA9 LINE L1 -284 6028 5200 5811 76 62 0 chr2 201320151 201320929 -51935654 - LTR12 LTR ERV1 0 826 1 3668 191 16 14 chr2 201320929 201321194 -51935389 - L1MA9 LINE L1 -1112 5200 4937 4996 252 70 28 chr2 201322458 201322775 -51933808 + L1M2b LINE L1 1643 1945 -5263 2048 144 48 22 chr2 201322775 201323130 -51933453 - THE1B LTR MaLR 0 364 1 4996 252 70 28 chr2 201323130 201323430 -51933153 + L1M2b LINE L1 1945 2231 -4977 1984 153 0 0 chr2 201323430 201323731 -51932852 + AluSg SINE Alu 3 303 -7 4996 252 70 28 chr2 201323731 201326349 -51930234 + L1M2b LINE L1 2231 5123 -2085 1814 258 65 34 chr2 201326362 201326935 -51929648 - L1ME1 LINE L1 -158 6077 5459 2100 122 0 7 chr2 201326935 201327231 -51929352 - AluSc SINE Alu -15 294 1 1814 258 65 34 chr2 201327231 201327498 -51929085 - L1ME1 LINE L1 -776 5459 5202 711 273 103 51 chr2 201327514 201327700 -51928883 - L1ME1 LINE L1 -4901 1495 1320 2334 95 3 3 chr2 201327700 201328006 -51928577 - AluSg SINE Alu -4 306 1 711 273 103 51 chr2 201328006 201328569 -51928014 - L1ME1 LINE L1 -5076 1320 707 287 344 75 18 chr2 201328611 201328838 -51927745 - L1ME1 LINE L1 -5797 599 360 227 161 36 0 chr2 201328866 201328922 -51927661 - L1MC4 LINE L1 -1338 6704 6647 193 339 18 67 chr2 201329449 201329614 -51926969 + L2 LINE L2 3156 3312 -1 2725 7 0 0 chr2 201329756 201330053 -51926530 - AluYa5 SINE Alu -1 310 14 189 319 59 50 chr2 201330976 201331095 -51925488 + L2 LINE L2 2736 2855 -459 2508 38 3 22 chr2 201332061 201332378 -51924205 + AluY SINE Alu 1 311 0 310 276 29 29 chr2 201333560 201333665 -51922918 + HUERS-P3 LTR ERV1 8667 8771 -148 764 232 46 11 chr2 201334012 201334238 -51922345 + MER61D LTR ERV1 338 1232 -18 1288 244 100 17 chr2 201334259 201335538 -51921045 + L1MD3 LINE L1 4732 6153 -11 290 258 296 0 chr2 201337490 201337622 -51918961 - MER5A DNA MER1_type -10 179 9 1884 252 48 15 chr2 201337828 201338368 -51918215 - MER74A LTR ERVL 0 558 1 281 344 38 38 chr2 201339223 201339383 -51917200 - MER5A DNA MER1_type -22 167 8 307 191 29 48 chr2 201339991 201340096 -51916487 + L1ME4a LINE L1 5861 5963 -158 187 304 25 25 chr2 201340110 201340189 -51916394 + MIR SINE MIR 65 143 -65 225 0 0 0 chr2 201340544 201340569 -51916014 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 25 0 0 0 chr2 201340735 201340760 -51915823 + AT_rich Low_complexity Low_complexity 1 25 0 562 312 98 32 chr2 201342137 201342422 -51914161 - L2 LINE L2 -2 3311 3008 584 143 0 0 chr2 201343838 201343929 -51912654 + AluY SINE Alu 210 300 -11 1929 140 14 0 chr2 201344477 201344807 -51911776 - AluSx SINE Alu 0 335 2 313 301 35 63 chr2 201345478 201345621 -51910962 + MIR SINE MIR 84 222 -40 225 0 0 0 chr2 201346210 201346235 -51910348 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 3998 152 65 4 chr2 201347060 201347740 -51908843 + MER50 LTR ERV1 1 721 -13 2128 60 77 0 chr2 201347819 201348104 -51908479 - AluY SINE Alu -4 307 1 425 283 58 39 chr2 201349534 201349739 -51906844 + L1MC5 LINE L1 7017 7225 -736 1688 205 0 0 chr2 201351415 201351713 -51904870 + AluJb SINE Alu 1 298 -14 315 0 0 0 chr2 201351726 201351761 -51904822 + (CA)n Simple_repeat Simple_repeat 1 35 0 583 246 62 85 chr2 201352160 201352371 -51904212 - MER58A DNA MER1_type -15 209 4 225 307 13 40 chr2 201355610 201355685 -51900898 + L2 LINE L2 3241 3313 0 8711 156 24 6 chr2 201356397 201357205 -51899378 + Tigger1 DNA MER2_type 2 794 -1624 2129 125 15 32 chr2 201357205 201357548 -51899035 - MER1B DNA MER1_type 0 337 1 8711 156 24 6 chr2 201357548 201358590 -51897993 + Tigger1 DNA MER2_type 794 1980 -438 1850 143 63 39 chr2 201358590 201358925 -51897658 - MER61A LTR ERV1 0 343 1 663 92 0 0 chr2 201358930 201359017 -51897566 - MER61A-int LTR ERV1 -5 5212 5126 222 253 67 13 chr2 201360629 201360704 -51895879 + L2 LINE L2 3203 3281 -32 21 36 0 0 chr2 201361410 201361438 -51895145 + AT_rich Low_complexity Low_complexity 1 28 0 555 40 66 0 chr2 201362025 201362101 -51894482 - MER4-int LTR ERV1 -811 5787 5707 295 133 0 0 chr2 201362101 201362146 -51894437 + MER4A LTR ERV1 620 664 0 4230 107 19 17 chr2 201362239 201362884 -51893699 - MER4A LTR ERV1 -14 650 5 838 242 16 0 chr2 201363032 201363218 -51893365 - MER5A DNA MER1_type 0 189 1 231 337 35 0 chr2 201363361 201363447 -51893136 + MIR3 SINE MIR 115 203 -5 4599 194 105 5 chr2 201364044 201365093 -51891490 + L1PBa LINE L1 6 1159 -5704 320 125 28 0 chr2 201365241 201365313 -51891270 + CT-rich Low_complexity Low_complexity 1 74 0 366 90 149 0 chr2 201367025 201367092 -51889491 - MADE1 DNA Mariner -3 77 1 24 53 0 0 chr2 201367607 201367645 -51888938 + AT_rich Low_complexity Low_complexity 1 38 0 1643 142 65 0 chr2 201367645 201367955 -51888628 - L1MA6 LINE L1 -8 6292 5963 380 248 85 16 chr2 201369432 201369561 -51887022 + MIR SINE MIR 119 256 -6 2162 90 24 0 chr2 201370367 201370656 -51885927 - AluSq SINE Alu -17 296 1 23 33 0 0 chr2 201371068 201371098 -51885485 + AT_rich Low_complexity Low_complexity 1 30 0 1989 96 33 0 chr2 201371244 201371545 -51885038 + AluY SINE Alu 1 310 0 258 106 0 0 chr2 201371796 201371843 -51884740 + (T)n Simple_repeat Simple_repeat 1 47 0 38 51 0 0 chr2 201372038 201372097 -51884486 + AT_rich Low_complexity Low_complexity 1 59 0 224 373 82 0 chr2 201372482 201372592 -51883991 - L2 LINE L2 -2 3311 3193 549 188 8 8 chr2 201373575 201373708 -51882875 - pTR5 LTR ERV1 -1573 865 733 * 3320 99 20 9 chr2 201373697 201374386 -51882197 - MER61-int LTR ERV1 -118 5099 4358 287 87 43 0 chr2 201374386 201374432 -51882151 + Tigger1 DNA MER2_type 872 919 -1499 3877 103 4 14 chr2 201374432 201374987 -51881596 - MER61-int LTR ERV1 -852 4365 3817 358 207 0 0 chr2 201374987 201375045 -51881538 + Tigger1 DNA MER2_type 2360 2417 -1 230 282 26 0 chr2 201375049 201375127 -51881456 - L1MC4 LINE L1 -1349 6693 6614 298 300 0 0 chr2 201376142 201376222 -51880361 + (TG)n Simple_repeat Simple_repeat 1 80 0 1501 198 128 69 chr2 201376510 201377251 -51879332 - LTR1 LTR ERV1 0 785 1 21 36 0 0 chr2 201377591 201377619 -51878964 + AT_rich Low_complexity Low_complexity 1 28 0 264 303 146 28 chr2 201377808 201378032 -51878551 - MIR SINE MIR -1 261 12 337 261 11 0 chr2 201378033 201378125 -51878458 - MIR3 SINE MIR -21 187 95 3499 131 4 8 chr2 201379126 201379653 -51876930 + MER1A DNA MER1_type 3 527 0 233 174 14 43 chr2 201379735 201379804 -51876779 + (TATAA)n Simple_repeat Simple_repeat 2 68 0 667 307 134 32 chr2 201379806 201380216 -51876367 - MLT1H LTR MaLR -24 525 74 447 19 0 0 chr2 201380253 201380305 -51876278 + (CATATA)n Simple_repeat Simple_repeat 1 52 0 198 327 103 9 chr2 201380503 201380610 -51875973 - L2 LINE L2 -8 3305 3189 32 57 0 0 chr2 201380998 201381051 -51875532 + AT_rich Low_complexity Low_complexity 1 53 0 290 274 0 0 chr2 201382902 201382975 -51873608 + (CATA)n Simple_repeat Simple_repeat 3 75 0 1942 106 0 41 chr2 201383076 201383393 -51873190 - AluSg SINE Alu 0 305 1 234 176 0 0 chr2 201383860 201383911 -51872672 + (CA)n Simple_repeat Simple_repeat 2 52 0 2071 138 3 10 chr2 201384361 201384672 -51871911 + AluSx SINE Alu 2 310 -2 207 69 0 0 chr2 201384696 201384725 -51871858 + (CAA)n Simple_repeat Simple_repeat 2 30 0 2702 7 0 0 chr2 201384802 201385099 -51871484 + AluYa5 SINE Alu 1 297 -14 2130 176 47 7 chr2 201385711 201386114 -51870469 - MSTB LTR MaLR -7 419 1 657 279 30 0 chr2 201386255 201386420 -51870163 + MER5B DNA MER1_type 3 172 -6 307 357 16 33 chr2 201386711 201386893 -51869690 - MER5A DNA MER1_type -7 182 4 642 62 0 0 chr2 201386962 201387043 -51869540 - L1PA5 LINE L1 -209 5945 5865 1686 46 0 5 chr2 201387043 201387252 -51869331 + L1PA5 LINE L1 5936 6151 -3 1833 142 84 32 chr2 201388060 201388406 -51868177 - THE1B LTR MaLR 0 364 1 2067 173 31 14 chr2 201388568 201388922 -51867661 + LTR23 LTR ERV1 1 365 -72 2894 205 27 59 chr2 201388922 201389668 -51866915 + MER72 LTR ERV1 1 722 0 2067 173 31 14 chr2 201389668 201389734 -51866849 + LTR23 LTR ERV1 365 428 -9 2261 112 3 0 chr2 201389734 201390072 -51866511 - AluSp SINE Alu 0 339 1 236 224 20 0 chr2 201390210 201390259 -51866324 - 5S rRNA rRNA -71 50 1 1206 188 227 24 chr2 201391490 201391904 -51864679 - LTR54B LTR ERV1 0 498 1 1887 220 43 59 chr2 201392047 201392693 -51863890 + MER92B LTR ERV1 1 636 0 279 54 0 0 chr2 201392854 201392891 -51863692 + (TG)n Simple_repeat Simple_repeat 1 37 0 1808 113 40 22 chr2 201393353 201393628 -51862955 + AluSg SINE Alu 11 290 -20 204 47 47 23 chr2 201393628 201393671 -51862912 + (TA)n Simple_repeat Simple_repeat 2 45 0 396 141 41 12 chr2 201394221 201394391 -51862192 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 405 292 14 0 chr2 201394455 201394593 -51861990 - L1MC4a LINE L1 -1316 6492 6361 1793 280 60 47 chr2 201394604 201395670 -51860913 - L1ME2 LINE L1 -10 6154 5078 293 243 14 14 chr2 201395768 201395842 -51860741 - MER58 DNA MER1_type -99 242 169 5083 118 19 0 chr2 201395910 201396679 -51859904 + L1PA13 LINE L1 5380 6163 0 1270 303 37 17 chr2 201396925 201397328 -51859255 + MER77 LTR ERV1 187 597 -8 488 269 29 18 chr2 201397561 201397732 -51858851 + L1M4 LINE L1 4532 4704 -1442 372 270 97 46 chr2 201397988 201398225 -51858358 + L1M4 LINE L1 3549 3797 -2349 771 220 26 37 chr2 201399320 201399511 -51857072 + MER97b DNA MER1_type? 242 430 -623 886 101 0 43 chr2 201399691 201399830 -51856753 + FLAM_C SINE Alu 1 133 0 259 211 78 22 chr2 201399969 201400059 -51856524 + L1ME3A LINE L1 6042 6136 -34 923 104 15 0 chr2 201400384 201400519 -51856064 - AluSg/x SINE Alu 0 312 176 2135 118 0 26 chr2 201401869 201402174 -51854409 - AluSx SINE Alu -15 297 1 6961 60 12 0 chr2 201402213 201403842 -51852741 - L1PA6 LINE L1 0 6154 4553 390 337 107 29 chr2 201405876 201406185 -51850398 - MLT1H LTR MaLR -195 354 22 2839 3 0 0 chr2 201406580 201406891 -51849692 + AluYa5 SINE Alu 1 311 0 998 257 5 5 chr2 201408146 201408364 -51848219 + MER58A DNA MER1_type 1 218 -6 23 68 0 0 chr2 201408628 201408672 -51847911 + AT_rich Low_complexity Low_complexity 1 44 0 302 245 51 20 chr2 201409540 201409638 -51846945 - MLT1E LTR MaLR -8 585 485 28 48 0 0 chr2 201410524 201410566 -51846017 + AT_rich Low_complexity Low_complexity 1 42 0 2829 171 56 10 chr2 201410566 201411233 -51845350 - L1MA4A LINE L1 -23 6277 5532 27 73 0 0 chr2 201412301 201412356 -51844227 + AT_rich Low_complexity Low_complexity 1 55 0 1760 131 0 101 chr2 201412376 201412704 -51843879 - AluSx SINE Alu -17 295 1 287 306 45 38 chr2 201413022 201413179 -51843404 - MLT1J1 LTR MaLR -286 160 3 2786 7 0 0 chr2 201413473 201413777 -51842806 + AluYa5 SINE Alu 1 304 -7 22 35 0 0 chr2 201414565 201414594 -51841989 + AT_rich Low_complexity Low_complexity 1 29 0 1980 222 47 4 chr2 201414674 201415160 -51841423 + L1PB1 LINE L1 6 512 -6351 11456 205 22 22 chr2 201415273 201419204 -51837379 + L1PB1 LINE L1 1431 5439 -1423 305 233 0 0 chr2 201419195 201419255 -51837328 - L1P LINE L1 -1370 4776 4717 * 5610 126 35 8 chr2 201419866 201420963 -51835620 + L1PB1 LINE L1 5741 6867 0 1834 143 17 10 chr2 201422564 201422865 -51833718 + AluSq SINE Alu 1 303 -10 525 91 61 0 chr2 201422884 201422983 -51833600 + GA-rich Low_complexity Low_complexity 4 108 0 3941 263 45 52 chr2 201423403 201424997 -51831586 + L1M4 LINE L1 16 1598 -4944 1874 175 34 0 chr2 201425056 201425411 -51831172 + L1PB4 LINE L1 5789 6155 -1 2126 241 68 12 chr2 201425412 201426218 -51830365 + L1MB7 LINE L1 5314 6184 0 1296 181 75 15 chr2 201426224 201426489 -51830094 + AluJo SINE Alu 1 281 -31 1783 159 0 29 chr2 201426679 201426987 -51829596 - AluJb SINE Alu -13 299 1 510 228 0 0 chr2 201428608 201428735 -51827848 + (TA)n Simple_repeat Simple_repeat 2 128 0 236 156 0 0 chr2 201428735 201428780 -51827803 + LTR66 LTR ERVL 394 438 -172 316 248 79 30 chr2 201428836 201428937 -51827646 + L1MC4 LINE L1 6603 6708 -1334 197 107 67 27 chr2 201430195 201430270 -51826313 + (TA)n Simple_repeat Simple_repeat 1 78 0 304 321 81 61 chr2 201430488 201430734 -51825849 + MIR SINE MIR 2 252 -10 304 350 66 0 chr2 201430949 201431086 -51825497 - L2 LINE L2 0 3313 3168 938 203 38 13 chr2 201433077 201433314 -51823269 - L1MD3 LINE L1 0 7995 7753 1890 214 66 48 chr2 201433341 201433887 -51822696 - MER74A LTR ERVL -2 556 1 186 43 0 0 chr2 201434175 201434198 -51822385 + (CA)n Simple_repeat Simple_repeat 1 23 0 1198 278 20 60 chr2 201434361 201434911 -51821672 + L1ME3A LINE L1 5424 5951 -219 216 0 0 0 chr2 201435219 201435243 -51821340 + (TG)n Simple_repeat Simple_repeat 2 25 0 533 188 68 8 chr2 201435414 201435547 -51821036 - LTR16C LTR ERVL 0 491 351 1981 106 0 4 chr2 201435554 201435827 -51820756 + AluSq SINE Alu 37 308 -5 329 342 26 64 chr2 201435905 201436171 -51820412 - LTR16C LTR ERVL -160 331 76 701 274 77 25 chr2 201436301 201436774 -51819809 - L1MC5 LINE L1 -519 7490 7120 1230 172 53 33 chr2 201438395 201438694 -51817889 + MLT1C LTR MaLR 1 345 -122 2695 141 143 2 chr2 201438699 201439183 -51817400 - LTR64 LTR ERVK -4 554 3 602 228 8 0 chr2 201439183 201439309 -51817274 + MLT1C LTR MaLR 341 467 0 5516 126 27 3 chr2 201440200 201441075 -51815508 - L1PA14 LINE L1 -3 6158 5263 8166 219 12 21 chr2 201441492 201443514 -51813069 - L1PA14 LINE L1 -910 5236 3233 274 287 53 21 chr2 201444035 201444129 -51812454 + MER58 DNA MER1_type 1 97 -289 * 286 239 109 0 chr2 201444127 201444219 -51812364 + MER58 DNA MER1_type 2319 2420 0 21 57 0 0 chr2 201444672 201444707 -51811876 + AT_rich Low_complexity Low_complexity 1 35 0 1215 237 46 54 chr2 201445325 201445717 -51810866 - MLT1B LTR MaLR -1 389 1 1301 229 16 32 chr2 201445889 201446260 -51810323 - MLT1A1 LTR MaLR 0 365 1 7429 208 48 68 chr2 201450423 201451930 -51804653 + L1MA10 LINE L1 2978 4422 -1724 2419 72 13 0 chr2 201451930 201452236 -51804347 + AluSp SINE Alu 1 310 -3 7429 208 48 68 chr2 201452236 201453052 -51803531 + L1MA10 LINE L1 4422 5253 -893 3002 180 46 14 chr2 201453104 201453274 -51803309 + L1MA10 LINE L1 5657 5820 -514 1972 122 13 3 chr2 201453274 201453578 -51803005 + AluSx SINE Alu 1 307 -5 3002 180 46 14 chr2 201453578 201454064 -51802519 + L1MA10 LINE L1 5820 6334 0 21 57 0 0 chr2 201454504 201454539 -51802044 + AT_rich Low_complexity Low_complexity 1 35 0 354 260 98 8 chr2 201505582 201505705 -51750878 + ERVL LTR ERVL 4488 4621 -1143 538 308 69 38 chr2 201505831 201506383 -51750200 + ERVL LTR ERVL 4728 5296 -189 1980 252 33 11 chr2 201506672 201507267 -51749316 + L1PA15-16 LINE L1 2336 2985 -3933 1195 118 32 0 chr2 201507271 201507458 -51749125 + MSTA LTR MaLR 1 193 -235 767 116 9 0 chr2 201507460 201507572 -51749011 + AluY SINE Alu 1 113 -198 1011 208 17 4 chr2 201507572 201507803 -51748780 - L1 LINE L1 -1503 4643 4410 1082 167 61 5 chr2 201507825 201508023 -51748560 - MSTA LTR MaLR -219 209 1 5376 223 33 32 chr2 201508023 201509592 -51746991 + L1 LINE L1 3853 5423 -733 2403 64 3 0 chr2 201509593 201509889 -51746694 - AluY SINE Alu -14 297 1 201 176 0 0 chr2 201510113 201510147 -51746436 + T-rich Low_complexity Low_complexity 1 34 0 269 241 35 0 chr2 201511408 201511466 -51745117 - L2 LINE L2 -94 3219 3160 21 0 0 0 chr2 201511514 201511535 -51745048 + AT_rich Low_complexity Low_complexity 1 21 0 245 433 47 7 chr2 201511749 201512024 -51744559 - L2 LINE L2 -349 2965 2680 1970 138 44 41 chr2 201512039 201512402 -51744181 + THE1B LTR MaLR 1 364 0 2426 47 10 13 chr2 201512575 201512874 -51743709 + AluY SINE Alu 1 298 -13 15935 193 83 28 chr2 201513178 201513864 -51742719 + L1MA2 LINE L1 20 666 -6899 2270 116 3 0 chr2 201513864 201514174 -51742409 + AluSq SINE Alu 3 313 0 15935 193 83 28 chr2 201514174 201516390 -51740193 + L1MA2 LINE L1 666 2757 -4808 1829 157 5 61 chr2 201516390 201516765 -51739818 - THE1A LTR MaLR -1 354 1 15935 193 83 28 chr2 201516765 201517043 -51739540 + L1MA2 LINE L1 2757 3018 -4547 335 60 20 0 chr2 201517043 201517093 -51739490 + (CA)n Simple_repeat Simple_repeat 2 52 0 15935 193 83 28 chr2 201517093 201518238 -51738345 + L1MA2 LINE L1 3018 4592 -2973 4226 26 0 0 chr2 201518212 201518708 -51737875 + L1HS LINE L1 7079 7574 0 * 9589 175 21 27 chr2 201518698 201519078 -51737505 + L1MA2 LINE L1 4545 4926 -2797 222 37 0 0 chr2 201519078 201519105 -51737478 + (GAAAA)n Simple_repeat Simple_repeat 2 28 0 1954 161 0 7 chr2 201519111 201519421 -51737162 + AluSx SINE Alu 1 308 -4 9589 175 21 27 chr2 201519421 201522176 -51734407 + L1MA2 LINE L1 4931 7667 -56 204 196 18 18 chr2 201522180 201522236 -51734347 + (TA)n Simple_repeat Simple_repeat 2 57 0 267 102 0 0 chr2 201522237 201522286 -51734297 + L1MA3 LINE L1 6257 6305 0 26 0 0 0 chr2 201522971 201522997 -51733586 + AT_rich Low_complexity Low_complexity 1 26 0 1390 214 18 27 chr2 201523209 201523546 -51733037 - MER44D DNA MER2_type -3 606 3 22 0 0 0 chr2 201523638 201523660 -51732923 + AT_rich Low_complexity Low_complexity 1 22 0 2476 54 0 0 chr2 201523734 201524031 -51732552 - AluY SINE Alu -12 299 3 487 239 122 35 chr2 201525147 201525344 -51731239 - L1ME2 LINE L1 -16 6148 5935 * 6382 37 8 2 chr2 201525340 201526126 -51730457 - L1PA5 LINE L1 0 6154 5365 575 262 52 39 chr2 201526120 201526353 -51730230 - L1ME2 LINE L1 -218 5944 5709 * 1886 135 32 199 chr2 201526360 201526447 -51730136 - THE1C LTR MaLR 0 364 264 2072 138 0 0 chr2 201526447 201526737 -51729846 - AluSx SINE Alu -22 290 1 1886 135 32 199 chr2 201526737 201527086 -51729497 - THE1C LTR MaLR -100 264 1 626 255 95 46 chr2 201527109 201527719 -51728864 - L1ME2 LINE L1 -485 5679 5028 336 100 250 0 chr2 201527721 201527781 -51728802 + MADE1 DNA Mariner 6 80 0 2469 105 8 24 chr2 201528031 201528401 -51728182 - THE1B LTR MaLR 0 364 1 315 298 70 9 chr2 201528423 201528537 -51728046 - LTR16A LTR ERVL -185 265 145 250 154 0 0 chr2 201528591 201528630 -51727953 - MER58 DNA MER1_type -176 39 1 457 264 13 29 chr2 201528737 201528953 -51727630 - L1ME2 LINE L1 -2148 3998 3785 24 32 0 0 chr2 201529704 201529735 -51726848 + AT_rich Low_complexity Low_complexity 1 31 0 255 254 0 0 chr2 201529916 201529975 -51726608 + A-rich Low_complexity Low_complexity 1 59 0 3033 211 81 48 chr2 201530381 201531171 -51725412 + L1MC3 LINE L1 6718 7550 -235 2491 53 0 3 chr2 201531171 201531473 -51725110 + AluY SINE Alu 1 301 -10 3033 211 81 48 chr2 201531473 201531700 -51724883 + L1MC3 LINE L1 7550 7768 -17 1588 256 82 27 chr2 201532302 201532900 -51723683 - L1ME1 LINE L1 -5 6161 5531 7207 171 8 9 chr2 201534077 201535354 -51721229 - HSMAR2 DNA Mariner -2 1300 25 3791 64 0 0 chr2 201535363 201535846 -51720737 - L1PA7 LINE L1 -1 6153 5671 33 43 0 0 chr2 201537035 201537082 -51719501 + AT_rich Low_complexity Low_complexity 1 47 0 219 323 100 62 chr2 201537462 201537592 -51718991 - MIR SINE MIR -109 153 19 225 362 36 7 chr2 201537755 201537893 -51718690 + L1MEc LINE L1 107 248 -6148 360 180 0 0 chr2 201537903 201537964 -51718619 - LTR40b LTR ERVL -1 461 401 478 281 106 55 chr2 201538719 201539947 -51716636 + L1MEc LINE L1 511 1763 -4452 1130 267 42 48 chr2 201540045 201540708 -51715875 + L1M4 LINE L1 3791 4449 -1697 947 231 94 46 chr2 201540717 201541154 -51715429 + L1M4 LINE L1 4784 5241 -905 327 312 23 98 chr2 201541197 201541412 -51715171 - MLT1I LTR MaLR -121 288 90 2397 48 0 32 chr2 201541518 201541833 -51714750 - AluY SINE Alu -6 305 1 7302 40 1 0 chr2 201543201 201544859 -51711724 - L1PA5 LINE L1 -5 6149 4485 24 0 0 0 chr2 201545494 201545518 -51711065 + AT_rich Low_complexity Low_complexity 1 24 0 1980 94 42 39 chr2 201545605 201545914 -51710669 + AluY SINE Alu 1 310 -1 243 204 0 0 chr2 201547682 201547736 -51708847 + (CATATA)n Simple_repeat Simple_repeat 1 54 0 188 375 0 0 chr2 201547921 201547993 -51708590 - L2 LINE L2 0 3272 3201 10001 199 40 32 chr2 201548369 201549884 -51706699 + L1M1 LINE L1 12 1514 -6051 1572 177 13 32 chr2 201549884 201550194 -51706389 + AluJb SINE Alu 1 304 -8 10001 199 40 32 chr2 201550194 201550413 -51706170 + L1M1 LINE L1 1514 1730 -5835 1886 142 4 0 chr2 201550413 201550688 -51705895 + AluSx SINE Alu 1 276 -36 10001 199 40 32 chr2 201550688 201552964 -51703619 + L1M1 LINE L1 1730 4726 -2839 12839 40 0 2 chr2 201552964 201555308 -51701275 + L1PA5 LINE L1 3810 6154 0 10001 199 40 32 chr2 201555308 201556446 -51700137 + L1M1 LINE L1 4726 5854 -1711 236 386 42 5 chr2 201557381 201557570 -51699013 + MER117 DNA MER1_type 2 197 0 286 295 115 41 chr2 201558359 201558481 -51698102 + L2 LINE L2 3182 3312 -1 10662 215 54 44 chr2 201558970 201563741 -51692842 - L1MA9 LINE L1 0 6200 1394 1764 298 88 19 chr2 201563785 201565533 -51691050 - L1MA9 LINE L1 -4495 1540 12 220 324 66 59 chr2 201565554 201565690 -51690893 - MIR3 SINE MIR -3 205 69 776 206 12 6 chr2 201565961 201566121 -51690462 + MER6B DNA MER2_type 5 165 -45 41 36 0 0 chr2 201567379 201567434 -51689149 + AT_rich Low_complexity Low_complexity 1 55 0 282 321 36 36 chr2 201567497 201567662 -51688921 + L2 LINE L2 2326 2490 -824 7641 24 0 0 chr2 201568433 201569469 -51687114 - L1PA3 LINE L1 0 6155 5121 13452 27 0 0 chr2 201569469 201571059 -51685524 + L1P LINE L1 3389 4978 -1168 32 75 0 0 chr2 201571117 201571184 -51685399 + AT_rich Low_complexity Low_complexity 1 67 0 203 184 0 0 chr2 201572283 201572321 -51684262 + T-rich Low_complexity Low_complexity 4 41 0 29 28 0 0 chr2 201572372 201572408 -51684175 + AT_rich Low_complexity Low_complexity 1 36 0 34 42 0 0 chr2 201572575 201572623 -51683960 + AT_rich Low_complexity Low_complexity 1 48 0 1680 183 84 0 chr2 201572652 201573008 -51683575 + MLT1B LTR MaLR 5 390 0 676 235 58 22 chr2 201573604 201573789 -51682794 - MER3 DNA MER1_type -85 124 1 2193 216 48 6 chr2 201574546 201575050 -51681533 - L1MC2 LINE L1 -7 6337 5813 472 218 160 16 chr2 201575092 201575280 -51681303 - L1MD3 LINE L1 -11 7984 7770 1765 143 44 0 chr2 201575921 201576232 -51680351 - AluSx SINE Alu 0 323 1 215 316 71 110 chr2 201576824 201577150 -51679433 + L2 LINE L2 2425 2737 -577 26 30 0 0 chr2 201578056 201578089 -51678494 + AT_rich Low_complexity Low_complexity 1 33 0 2110 127 0 10 chr2 201578122 201578422 -51678161 - AluSg SINE Alu -13 297 1 485 357 33 21 chr2 201578737 201578978 -51677605 + MIR SINE MIR 18 261 -1 469 169 0 0 chr2 201579960 201580037 -51676546 + MER61E LTR ERV1 378 454 -115 406 272 161 44 chr2 201580248 201580428 -51676155 + MIR SINE MIR 14 214 -48 1862 206 81 21 chr2 201581286 201581595 -51674988 + MER67D LTR ERV1 1 351 -163 2246 125 25 11 chr2 201581595 201581954 -51674629 + THE1B LTR MaLR 1 364 0 1862 206 81 21 chr2 201581954 201582125 -51674458 + MER67D LTR ERV1 351 510 -4 582 312 12 6 chr2 201585233 201585403 -51671180 - MER5B DNA MER1_type 0 178 8 1900 145 10 3 chr2 201585475 201585771 -51670812 + AluSx SINE Alu 1 298 -14 466 212 150 28 chr2 201585959 201586118 -51670465 - MIR SINE MIR -44 218 37 21 36 0 0 chr2 201586152 201586180 -51670403 + AT_rich Low_complexity Low_complexity 1 28 0 244 297 0 14 chr2 201586243 201586317 -51670266 - L2 LINE L2 0 3313 3241 186 308 231 6 chr2 201586670 201586710 -51669873 - MIR SINE MIR -8 254 224 1761 218 94 26 chr2 201586710 201587179 -51669404 - MLT1D LTR MaLR 0 505 5 186 308 231 6 chr2 201587179 201587307 -51669276 - MIR SINE MIR -38 224 48 2490 178 86 26 chr2 201587982 201588544 -51668039 + Tigger7 DNA MER2_type 3 2487 0 26 50 0 0 chr2 201589000 201589040 -51667543 + AT_rich Low_complexity Low_complexity 1 40 0 305 309 185 5 chr2 201589050 201589272 -51667311 - MLT1F LTR MaLR 0 590 331 518 216 72 0 chr2 201589305 201589430 -51667153 + MER76 LTR ERV 13 146 -542 1146 270 76 36 chr2 201589436 201589855 -51666728 + MER76 LTR ERV 251 686 -2 237 33 0 0 chr2 201589873 201589903 -51666680 + (TG)n Simple_repeat Simple_repeat 1 30 0 278 353 48 44 chr2 201589979 201590231 -51666352 - MLT1F LTR MaLR -327 263 11 269 217 14 29 chr2 201590596 201590665 -51665918 + L2 LINE L2 3242 3309 -4 511 290 71 66 chr2 201591910 201592275 -51664308 + L1MDa LINE L1 1367 1733 -4807 26 30 0 0 chr2 201592388 201592421 -51664162 + AT_rich Low_complexity Low_complexity 1 33 0 659 221 20 119 chr2 201592439 201592742 -51663841 - L1MA5 LINE L1 -1 6299 6027 259 233 55 27 chr2 201593198 201593271 -51663312 + L1M4 LINE L1 3498 3572 -2574 297 242 124 31 chr2 201593695 201593856 -51662727 + L1M4 LINE L1 4027 4202 -1944 767 68 0 0 chr2 201593948 201594051 -51662532 + L1PA8 LINE L1 6064 6166 -6 642 246 97 34 chr2 201594072 201594486 -51662097 + L1M4 LINE L1 4377 4816 -1330 2814 10 0 0 chr2 201595088 201595399 -51661184 - AluYb8 SINE Alu -7 311 1 324 0 0 0 chr2 201595785 201595821 -51660762 + (CA)n Simple_repeat Simple_repeat 1 36 0 982 262 93 12 chr2 201595854 201596175 -51660408 + LTR16A LTR ERVL 16 362 -88 35 54 0 0 chr2 201596206 201596262 -51660321 + AT_rich Low_complexity Low_complexity 1 56 0 1247 193 24 28 chr2 201597842 201598132 -51658451 + AluJb SINE Alu 33 321 0 245 232 207 0 chr2 201598281 201598363 -51658220 + MIR SINE MIR 28 126 -136 1158 226 157 12 chr2 201598388 201598707 -51657876 + MLT1A2 LTR MaLR 10 374 0 340 304 121 59 chr2 201598711 201598984 -51657599 - LTR16A LTR ERVL -30 420 131 22 0 0 0 chr2 201600409 201600431 -51656152 + AT_rich Low_complexity Low_complexity 1 22 0 917 263 72 50 chr2 201600709 201601128 -51655455 - LTR16A1 LTR ERVL -3 454 27 2237 246 28 13 chr2 201601128 201601844 -51654739 - L1MCa LINE L1 -3167 3259 2533 7274 209 17 20 chr2 201601846 201602458 -51654125 - L1PB4 LINE L1 -11 6145 5533 1686 66 0 0 chr2 201602458 201602669 -51653914 - AluY SINE Alu 0 311 101 7274 209 17 20 chr2 201602669 201604676 -51651907 - L1PB4 LINE L1 -623 5533 3462 1118 165 7 54 chr2 201604678 201604999 -51651584 - L1MCa LINE L1 -3953 2473 2250 481 346 73 44 chr2 201605007 201605553 -51651030 - HAL1 LINE L1 -113 2394 1833 410 229 18 9 chr2 201605979 201606088 -51650495 - HAL1 LINE L1 -1602 905 796 28 0 0 0 chr2 201607517 201607545 -51649038 + AT_rich Low_complexity Low_complexity 1 28 0 375 23 0 0 chr2 201607864 201607908 -51648675 + (TG)n Simple_repeat Simple_repeat 1 44 0 1656 180 3 16 chr2 201608029 201608334 -51648249 + AluJo SINE Alu 12 312 0 190 274 0 0 chr2 201608456 201608507 -51648076 + L2 LINE L2 3263 3313 0 335 278 40 20 chr2 201608881 201609056 -51647527 - L1ME LINE L1 -471 5691 5513 29 60 0 0 chr2 201609060 201609110 -51647473 + AT_rich Low_complexity Low_complexity 1 50 0 222 91 0 0 chr2 201609261 201609294 -51647289 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 283 212 91 10 chr2 201609304 201609403 -51647180 - L1MC5 LINE L1 -516 7445 7339 306 294 119 18 chr2 201609406 201609692 -51646891 - L1MC4a LINE L1 -1829 5979 5665 584 318 98 53 chr2 201609868 201610468 -51646115 - L1MC4a LINE L1 -3313 2833 2207 2223 81 7 3 chr2 201610479 201610774 -51645809 - AluY SINE Alu -15 296 1 327 290 97 65 chr2 201611040 201611226 -51645357 + MIR SINE MIR 15 206 -56 293 362 22 0 chr2 201611827 201611965 -51644618 + MIR SINE MIR 112 252 -10 415 323 22 45 chr2 201612412 201612635 -51643948 - LTR16C LTR ERVL -2 489 272 200 295 32 11 chr2 201613072 201613167 -51643416 + CT-rich Low_complexity Low_complexity 1 97 0 1786 221 52 25 chr2 201613262 201613706 -51642877 - MLT1C LTR MaLR -8 459 4 335 289 156 33 chr2 201614964 201615175 -51641408 + MIR SINE MIR 3 239 -23 201 191 0 48 chr2 201615538 201615580 -51641003 + polypurine Low_complexity Low_complexity 3 42 0 28 29 0 0 chr2 201616557 201616592 -51639991 + AT_rich Low_complexity Low_complexity 1 35 0 251 230 23 23 chr2 201616981 201617068 -51639515 + (TA)n Simple_repeat Simple_repeat 1 87 0 384 130 0 0 chr2 201617150 201617219 -51639364 + (TA)n Simple_repeat Simple_repeat 2 70 0 570 184 43 93 chr2 201617231 201617417 -51639166 - MLT2C1 LTR ERVL -19 395 196 344 97 74 51 chr2 201618120 201618295 -51638288 + (TA)n Simple_repeat Simple_repeat 2 180 0 26 82 0 0 chr2 201618333 201618394 -51638189 + AT_rich Low_complexity Low_complexity 1 61 0 827 197 20 70 chr2 201618593 201618837 -51637746 - MER54A LTR ERVL -111 790 559 2608 205 19 44 chr2 201618876 201619441 -51637142 - MER54A LTR ERVL -348 553 3 229 340 97 0 chr2 201621980 201622083 -51634500 - MIR3 SINE MIR -14 194 82 21 36 0 0 chr2 201623364 201623392 -51633191 + AT_rich Low_complexity Low_complexity 1 28 0 25 51 0 0 chr2 201623545 201623584 -51632999 + AT_rich Low_complexity Low_complexity 1 39 0 27 0 0 0 chr2 201623714 201623741 -51632842 + AT_rich Low_complexity Low_complexity 1 27 0 213 208 0 0 chr2 201624100 201624148 -51632435 + (CA)n Simple_repeat Simple_repeat 1 48 0 299 22 0 44 chr2 201624305 201624350 -51632233 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 42035 41 21 1 chr2 201624350 201630369 -51626214 - L1PA3 LINE L1 -13 6142 1 274 270 87 52 chr2 201630473 201630588 -51625995 + L2 LINE L2 3154 3272 0 661 146 0 15 chr2 201632592 201632722 -51623861 + (CCCCCT)n Simple_repeat Simple_repeat 6 133 0 2461 60 0 0 chr2 201632753 201633055 -51623528 + AluY SINE Alu 1 302 -9 470 316 86 40 chr2 201633548 201633826 -51622757 + L3 LINE CR1 1128 1418 -159 2038 143 19 30 chr2 201634647 201635012 -51621571 - THE1C LTR MaLR -14 361 1 28 79 0 0 chr2 201635820 201635883 -51620700 + AT_rich Low_complexity Low_complexity 1 63 0 3967 208 36 29 chr2 201637169 201638609 -51617974 + L1MB3 LINE L1 4735 6182 -1 23 33 0 0 chr2 201639248 201639278 -51617305 + AT_rich Low_complexity Low_complexity 1 30 0 22 56 0 0 chr2 201639297 201639333 -51617250 + AT_rich Low_complexity Low_complexity 1 36 0 28 29 0 0 chr2 201639596 201639631 -51616952 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr2 201639672 201639694 -51616889 + AT_rich Low_complexity Low_complexity 1 22 0 258 32 0 0 chr2 201640421 201640452 -51616131 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 209 374 95 11 chr2 201640592 201640782 -51615801 + MIR SINE MIR 2 207 -55 24 0 0 0 chr2 201640832 201640856 -51615727 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 201642120 201642141 -51614442 + AT_rich Low_complexity Low_complexity 1 21 0 2164 132 0 0 chr2 201642527 201642837 -51613746 + AluSq SINE Alu 1 310 -3 1917 136 7 7 chr2 201642851 201643145 -51613438 + AluSx SINE Alu 1 294 -18 884 173 188 0 chr2 201643263 201643460 -51613123 + L1PA16 LINE L1 5922 6155 -11 338 221 66 44 chr2 201643459 201643595 -51612988 + L1ME LINE L1 5648 5786 -335 * 406 179 0 18 chr2 201643602 201643714 -51612869 + (TA)n Simple_repeat Simple_repeat 1 110 0 1397 258 94 16 chr2 201644456 201644891 -51611692 - MLT1D LTR MaLR -6 499 31 23 78 0 0 chr2 201645046 201645097 -51611486 + AT_rich Low_complexity Low_complexity 1 51 0 1843 119 7 29 chr2 201645182 201645460 -51611123 - AluSx SINE Alu -7 305 34 254 178 140 140 chr2 201645754 201645911 -51610672 - MLT1H LTR MaLR -392 157 1 211 180 60 0 chr2 201646610 201646660 -51609923 + (CAAGA)n Simple_repeat Simple_repeat 4 56 0 300 53 0 0 chr2 201647632 201647670 -51608913 + (TA)n Simple_repeat Simple_repeat 2 39 0 260 245 21 0 chr2 201648038 201648132 -51608451 + (CATA)n Simple_repeat Simple_repeat 4 99 0 2112 162 44 33 chr2 201648801 201649348 -51607235 + MLT2A2 LTR ERVL 1 554 0 4351 185 40 11 chr2 201650571 201651556 -51605027 + L1MA4 LINE L1 4807 5955 -345 1952 73 0 51 chr2 201651556 201651829 -51604754 + AluY SINE Alu 41 299 -12 4351 185 40 11 chr2 201651829 201652158 -51604425 + L1MA4 LINE L1 5955 6273 -27 21 0 0 0 chr2 201656572 201656593 -51599990 + AT_rich Low_complexity Low_complexity 1 21 0 19166 185 24 16 chr2 201656871 201661184 -51595399 + L1M1 LINE L1 14 4361 -3204 346 131 111 81 chr2 201661185 201661284 -51595299 + L1M1 LINE L1 2678 2779 -4786 452 245 33 13 chr2 201661290 201661441 -51595142 + L1M1 LINE L1 4370 4523 -3042 * 13040 209 39 9 chr2 201661432 201664067 -51592516 + L1PA13 LINE L1 2014 4831 -2753 2753 10 0 3 chr2 201664067 201664376 -51592207 + AluYa5 SINE Alu 1 308 -3 13040 209 39 9 chr2 201664376 201665773 -51590810 + L1PA13 LINE L1 4831 6185 -1399 5140 119 28 18 chr2 201665802 201666657 -51589926 + L1PA13 LINE L1 6733 7596 -5 3161 120 33 8 chr2 201666660 201667177 -51589406 + L1MA1 LINE L1 5773 6302 0 465 97 0 0 chr2 201667196 201667268 -51589315 + L1MA2 LINE L1 6233 6304 0 400 238 115 123 chr2 201668431 201668666 -51587917 - MIR SINE MIR -27 235 3 21 0 0 0 chr2 201668937 201668958 -51587625 + AT_rich Low_complexity Low_complexity 1 21 0 182 109 91 91 chr2 201668974 201669029 -51587554 + MIR SINE MIR 118 172 -90 25 0 0 0 chr2 201669686 201669711 -51586872 + AT_rich Low_complexity Low_complexity 1 25 0 246 314 58 15 chr2 201670129 201670266 -51586317 + MLT1J LTR MaLR 107 249 -262 419 318 92 35 chr2 201670825 201671171 -51585412 - MLT1I LTR MaLR -23 386 21 1880 174 11 14 chr2 201671286 201671653 -51584930 - L1PB4 LINE L1 -2 6154 5789 228 137 0 39 chr2 201671679 201671730 -51584853 + L1MC4 LINE L1 6658 6706 -1336 * 292 80 120 107 chr2 201671708 201671783 -51584800 - L1PB4 LINE L1 -510 5793 5718 2529 163 45 31 chr2 201671811 201672496 -51584087 - L1P5 LINE L1 -387 5769 5074 1169 235 63 32 chr2 201672782 201673127 -51583456 - MLT1A1 LTR MaLR -4 501 1 396 227 0 11 chr2 201673195 201673283 -51583300 + AluS SINE Alu 2 88 -214 5335 157 45 14 chr2 201673286 201674595 -51581988 - L1MA3 LINE L1 -69 6236 4885 1629 262 123 28 chr2 201674937 201675796 -51580787 - L1MCc LINE L1 -2906 4035 3095 312 102 0 0 chr2 201675798 201675847 -51580736 + (CA)n Simple_repeat Simple_repeat 2 50 0 21 36 0 0 chr2 201675888 201675916 -51580667 + AT_rich Low_complexity Low_complexity 1 28 0 328 295 70 50 chr2 201676041 201676360 -51580223 - L1MCc LINE L1 -4896 2198 1732 247 152 0 0 chr2 201676404 201676450 -51580133 - L1MA4A LINE L1 -6 6297 6252 1894 191 29 8 chr2 201676450 201676828 -51579755 + L1MA4 LINE L1 5853 6238 -62 508 291 26 33 chr2 201676827 201677193 -51579390 - L1MCc LINE L1 -4918 1505 1348 * 238 250 0 48 chr2 201677240 201677324 -51579259 - L1MCc LINE L1 -5169 1254 1175 657 294 93 34 chr2 201677717 201678102 -51578481 - L1MCc LINE L1 -5981 442 35 1332 186 17 75 chr2 201678133 201678428 -51578155 + AluJb SINE Alu 11 288 -24 287 346 109 34 chr2 201681073 201681423 -51575160 + L2 LINE L2 2472 2847 -467 32 0 0 0 chr2 201681756 201681788 -51574795 + AT_rich Low_complexity Low_complexity 1 32 0 316 335 134 6 chr2 201681921 201682085 -51574498 - L1MC/D LINE L1 -2064 5744 5560 26 0 0 0 chr2 201684680 201684706 -51571877 + AT_rich Low_complexity Low_complexity 1 26 0 7458 31 0 0 chr2 201685176 201686169 -51570414 - L1PA4 LINE L1 -5 6150 5161 3549 32 0 0 chr2 201686169 201686601 -51569982 + L1PA4 LINE L1 4729 5160 -986 25 51 0 0 chr2 201686731 201686770 -51569813 + AT_rich Low_complexity Low_complexity 1 39 0 23 54 0 0 chr2 201686783 201686820 -51569763 + AT_rich Low_complexity Low_complexity 1 37 0 1029 250 39 103 chr2 201687124 201687841 -51568742 - L1MEc LINE L1 -4148 2248 1578 185 180 20 0 chr2 201688947 201688997 -51567586 + (CATATA)n Simple_repeat Simple_repeat 4 54 0 22 35 0 0 chr2 201690030 201690059 -51566524 + AT_rich Low_complexity Low_complexity 1 29 0 1808 164 6 6 chr2 201690197 201690508 -51566075 + AluSx SINE Alu 1 311 -1 24 32 0 0 chr2 201690718 201690749 -51565834 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr2 201692646 201692674 -51563909 + AT_rich Low_complexity Low_complexity 1 28 0 5005 178 63 15 chr2 201692946 201694506 -51562077 + L1MA3 LINE L1 4660 6305 0 183 129 0 0 chr2 201694608 201694639 -51561944 + (TG)n Simple_repeat Simple_repeat 2 32 0 237 136 23 0 chr2 201694665 201694709 -51561874 - L1M1 LINE L1 -834 5471 5427 * 4787 182 74 14 chr2 201694706 201695782 -51560801 - L1M1 LINE L1 -1074 5072 3932 1346 213 3 16 chr2 201695783 201696097 -51560486 + L1M1 LINE L1 3606 3915 -2231 318 87 0 0 chr2 201696493 201696539 -51560044 + (TC)n Simple_repeat Simple_repeat 1 46 0 1634 262 99 61 chr2 201696839 201697880 -51558703 + L1MDb LINE L1 773 1773 -4633 292 160 14 0 chr2 201697880 201697989 -51558594 - Alu SINE Alu -17 285 247 1634 262 99 61 chr2 201697989 201698046 -51558537 + L1MDb LINE L1 1773 1826 -4580 1751 127 52 4 chr2 201698046 201698350 -51558233 - AluSg SINE Alu 0 319 3 1634 262 99 61 chr2 201698350 201699140 -51557443 + L1MDb LINE L1 1826 2827 -3579 332 329 20 0 chr2 201699148 201699353 -51557230 + L1MA10 LINE L1 5953 6320 -5 2373 54 0 10 chr2 201699370 201699665 -51556918 - AluY SINE Alu -19 292 1 400 325 60 17 chr2 201699671 201699905 -51556678 + L1ME LINE L1 5579 5822 -299 21 89 0 0 chr2 201700243 201700299 -51556284 + AT_rich Low_complexity Low_complexity 1 56 0 410 198 0 0 chr2 201700742 201700823 -51555760 + AluS SINE Alu 220 300 -1 443 180 22 34 chr2 201701190 201701368 -51555215 + (TGGG)n Simple_repeat Simple_repeat 4 179 0 216 202 19 48 chr2 201701371 201701475 -51555108 + G-rich Low_complexity Low_complexity 3 103 0 290 316 152 12 chr2 201701594 201701765 -51554818 + MIR SINE MIR 2 196 -66 854 119 7 33 chr2 201701963 201702114 -51554469 - L1PA15 LINE L1 -6 6159 6013 25 31 0 0 chr2 201703557 201703589 -51552994 + AT_rich Low_complexity Low_complexity 1 32 0 236 353 42 34 chr2 201703868 201703987 -51552596 - MLT1K LTR MaLR -299 289 170 380 226 139 0 chr2 201704661 201704776 -51551807 + L1MA10 LINE L1 6197 6327 -7 228 105 0 0 chr2 201705036 201705061 -51551522 + (TAA)n Simple_repeat Simple_repeat 2 29 -10 1496 201 3 3 chr2 201705061 201705350 -51551233 + AluSx SINE Alu 3 291 -21 228 105 0 0 chr2 201705350 201705362 -51551221 + (TAA)n Simple_repeat Simple_repeat 28 39 0 320 269 90 18 chr2 201705830 201705997 -51550586 + L1M4 LINE L1 765 943 -5599 300 27 0 0 chr2 201706000 201706037 -51550546 + (CA)n Simple_repeat Simple_repeat 2 38 0 245 267 0 0 chr2 201706455 201706515 -51550068 + (CATATA)n Simple_repeat Simple_repeat 4 63 0 226 260 8 79 chr2 201706713 201706795 -51549788 + L1ME LINE L1 5486 5557 -605 1810 113 15 4 chr2 201706795 201707060 -51549523 - AluSc SINE Alu -7 302 35 226 260 8 79 chr2 201707060 201707104 -51549479 + L1ME LINE L1 5557 5603 -559 1454 251 105 15 chr2 201707259 201707734 -51548849 + LTR40a LTR ERVL 2 519 0 29 0 0 0 chr2 201708072 201708101 -51548482 + AT_rich Low_complexity Low_complexity 1 29 0 1877 158 22 92 chr2 201708715 201709172 -51547411 + MER61B LTR ERV1 1 425 0 211 365 72 14 chr2 201709748 201709970 -51546613 + L2 LINE L2 843 1077 -2237 1357 139 0 5 chr2 201710104 201710345 -51546238 + AluSg/x SINE Alu 77 316 0 256 321 61 30 chr2 201710362 201710493 -51546090 + L2 LINE L2 2242 2376 -938 2257 85 12 6 chr2 201710646 201710974 -51545609 - L1PA8 LINE L1 -5 6167 5838 879 168 89 35 chr2 201710974 201711177 -51545406 + THE1C LTR MaLR 162 375 0 6526 172 90 41 chr2 201711177 201712893 -51543690 + L1MC1 LINE L1 774 2572 -3854 1133 162 66 60 chr2 201712881 201713183 -51543400 + L1MA8 LINE L1 5984 6287 -4 * 6516 245 52 11 chr2 201713186 201716955 -51539628 + L1MC1 LINE L1 2561 6612 -1 2487 127 0 11 chr2 201717394 201717771 -51538812 + THE1C LTR MaLR 1 373 -2 24 0 0 0 chr2 201718139 201718163 -51538420 + AT_rich Low_complexity Low_complexity 1 24 0 368 80 53 0 chr2 201718237 201718317 -51538266 - L1P5 LINE L1 -591 5565 5477 3359 33 0 0 chr2 201718317 201718713 -51537870 + L1PA3 LINE L1 5756 6152 -3 492 254 12 30 chr2 201720293 201720462 -51536121 - L1MB8 LINE L1 -6 6172 6007 1688 201 19 75 chr2 201720488 201721000 -51535583 - L1MB8 LINE L1 -311 5867 5389 2172 316 39 33 chr2 201721919 201722833 -51533750 - L1M4b LINE L1 -5929 930 11 207 167 0 0 chr2 201722898 201722940 -51533643 + (TG)n Simple_repeat Simple_repeat 2 43 0 21 0 0 0 chr2 201723413 201723434 -51533149 + AT_rich Low_complexity Low_complexity 1 21 0 210 196 46 6 chr2 201726759 201726932 -51529651 + (TA)n Simple_repeat Simple_repeat 1 180 0 310 176 36 12 chr2 201726994 201727159 -51529424 + (TA)n Simple_repeat Simple_repeat 1 169 0 253 204 36 0 chr2 201727173 201727310 -51529273 + (TA)n Simple_repeat Simple_repeat 1 142 0 392 217 17 6 chr2 201727343 201727518 -51529065 + (TA)n Simple_repeat Simple_repeat 2 178 0 251 177 16 0 chr2 201727593 201727655 -51528928 + (TA)n Simple_repeat Simple_repeat 1 63 0 300 196 15 128 chr2 201727661 201727794 -51528789 - L1MC4 LINE L1 -1339 6703 6586 26 88 0 0 chr2 201727800 201727868 -51528715 + AT_rich Low_complexity Low_complexity 1 68 0 189 171 0 0 chr2 201728452 201728487 -51528096 + (CATA)n Simple_repeat Simple_repeat 2 36 0 21 71 0 0 chr2 201728494 201728536 -51528047 + AT_rich Low_complexity Low_complexity 1 42 0 22 35 0 0 chr2 201728968 201728997 -51527586 + AT_rich Low_complexity Low_complexity 1 29 0 38 0 0 0 chr2 201729102 201729140 -51527443 + AT_rich Low_complexity Low_complexity 1 38 0 2194 112 3 3 chr2 201730011 201730315 -51526268 + AluSg SINE Alu 1 304 -6 330 216 0 0 chr2 201730315 201730389 -51526194 + (CATA)n Simple_repeat Simple_repeat 3 76 0 2452 58 3 0 chr2 201731117 201731427 -51525156 + AluY SINE Alu 1 311 0 501 332 61 20 chr2 201731588 201731784 -51524799 + MIR SINE MIR 44 247 -15 752 169 14 0 chr2 201731982 201732124 -51524459 + L1PB4 LINE L1 6013 6156 0 21 57 0 0 chr2 201732203 201732238 -51524345 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr2 201733816 201733838 -51522745 + AT_rich Low_complexity Low_complexity 1 22 0 234 160 0 0 chr2 201736034 201736084 -51520499 + (TA)n Simple_repeat Simple_repeat 2 51 0 28 91 0 0 chr2 201736146 201736223 -51520360 + AT_rich Low_complexity Low_complexity 1 77 0 260 167 67 0 chr2 201737161 201737221 -51519362 + L1MC4 LINE L1 6640 6703 -1339 246 172 78 0 chr2 201737178 201737242 -51519341 - L1MCa LINE L1 -4362 2064 1996 * 182 312 0 54 chr2 201737782 201737875 -51518708 - L2 LINE L2 0 3272 3185 6419 200 151 20 chr2 201737934 201739453 -51517130 - MER52A LTR ERV1 0 1755 39 246 361 60 8 chr2 201739471 201739604 -51516979 - MIR SINE MIR -118 144 5 8999 27 6 0 chr2 201739711 201741549 -51515034 + L1PA2 LINE L1 4304 6151 -4 317 366 13 13 chr2 201741832 201741985 -51514598 + MIR SINE MIR 54 206 -56 7260 150 13 27 chr2 201742227 201743546 -51513037 - HSMAR2 DNA Mariner -1 1301 2 26 0 0 0 chr2 201743605 201743631 -51512952 + AT_rich Low_complexity Low_complexity 1 26 0 411 320 39 7 chr2 201743693 201743846 -51512737 + HAL1 LINE L1 467 624 -1883 305 295 131 29 chr2 201743953 201744197 -51512386 + HAL1 LINE L1 788 1056 -1451 4647 170 22 36 chr2 201744235 201745188 -51511395 + L1MC1 LINE L1 5377 6316 -17 254 282 159 12 chr2 201745208 201745460 -51511123 + HAL1 LINE L1 1067 1355 -1152 1902 141 3 0 chr2 201745755 201746038 -51510545 + AluSq SINE Alu 3 286 -27 357 330 121 49 chr2 201746145 201746615 -51509968 - L2 LINE L2 -827 2487 1984 2097 128 0 3 chr2 201746818 201747124 -51509459 + AluSg SINE Alu 2 306 -4 31 26 0 0 chr2 201747223 201747261 -51509322 + AT_rich Low_complexity Low_complexity 1 38 0 1905 189 15 27 chr2 201747491 201747898 -51508685 - L1MD2 LINE L1 -362 5997 5596 4786 256 82 47 chr2 201747906 201748122 -51508461 - L1MDa LINE L1 -4673 1867 1660 1724 196 48 0 chr2 201748122 201748453 -51508130 - MER7A DNA MER2_type -1 345 1 4786 256 82 47 chr2 201748453 201750052 -51506531 - L1MDa LINE L1 -4880 1660 16 2281 74 3 6 chr2 201750074 201750385 -51506198 - L1PA5 LINE L1 0 6154 5845 40273 73 3 2 chr2 201750485 201756141 -51500442 - L1PA5 LINE L1 -482 5672 10 423 327 48 44 chr2 201757117 201757368 -51499215 - MIR SINE MIR -6 256 5 28 29 0 0 chr2 201757412 201757447 -51499136 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr2 201757549 201757572 -51499011 + AT_rich Low_complexity Low_complexity 1 23 0 21 82 0 0 chr2 201757976 201758025 -51498558 + AT_rich Low_complexity Low_complexity 1 49 0 244 321 92 0 chr2 201759269 201759378 -51497205 + MIR SINE MIR 144 262 0 21 36 0 0 chr2 201759806 201759834 -51496749 + AT_rich Low_complexity Low_complexity 1 28 0 255 31 0 0 chr2 201760336 201760368 -51496215 + (CA)n Simple_repeat Simple_repeat 2 33 0 31 26 0 0 chr2 201761442 201761480 -51495103 + AT_rich Low_complexity Low_complexity 1 38 0 22 35 0 0 chr2 201761604 201761633 -51494950 + AT_rich Low_complexity Low_complexity 1 29 0 198 0 0 0 chr2 201762305 201762327 -51494256 + (TA)n Simple_repeat Simple_repeat 1 22 0 3339 208 44 16 chr2 201762468 201763198 -51493385 + MER54A LTR ERVL 138 887 -14 503 240 0 0 chr2 201763199 201763299 -51493284 - Tigger5 DNA MER2_type -2 2321 2222 381 269 0 10 chr2 201763288 201763392 -51493191 - Tigger5 DNA MER2_type -2217 106 4 * 1238 340 41 12 chr2 201763492 201764073 -51492510 - HERV16 LTR ERVL -2235 2761 2181 692 357 43 18 chr2 201764285 201765023 -51491560 - HERV16 LTR ERVL -3416 1580 797 380 55 18 0 chr2 201765136 201765191 -51491392 + (TG)n Simple_repeat Simple_repeat 1 56 0 305 269 46 15 chr2 201765320 201765450 -51491133 + Charlie8 DNA MER1_type 74 207 -2210 31 0 0 0 chr2 201766167 201766198 -51490385 + AT_rich Low_complexity Low_complexity 1 31 0 2417 201 62 4 chr2 201766320 201766851 -51489732 - MER68 LTR ERV1 0 562 1 25 0 0 0 chr2 201767599 201767624 -51488959 + AT_rich Low_complexity Low_complexity 1 25 0 28 48 0 0 chr2 201767799 201767841 -51488742 + AT_rich Low_complexity Low_complexity 1 42 0 327 25 0 0 chr2 201768805 201768845 -51487738 + (TG)n Simple_repeat Simple_repeat 2 41 0 26 0 0 0 chr2 201768875 201768901 -51487682 + AT_rich Low_complexity Low_complexity 1 26 0 1397 183 106 28 chr2 201769098 201769458 -51487125 - MLT1B LTR MaLR 0 390 3 21 36 0 0 chr2 201769555 201769583 -51487000 + AT_rich Low_complexity Low_complexity 1 28 0 240 287 204 9 chr2 201770187 201770295 -51486288 - MIR SINE MIR -114 148 20 265 373 118 0 chr2 201770532 201770701 -51485882 - MER91A DNA MER1_type 0 196 8 214 289 0 0 chr2 201772090 201772142 -51484441 + MIR SINE MIR 190 241 -21 250 269 59 59 chr2 201772498 201772617 -51483966 + ERVL LTR ERVL 3435 3553 -2101 242 227 34 68 chr2 201772624 201772712 -51483871 + LTR33 LTR ERVL 429 513 -8 216 122 0 0 chr2 201773477 201773518 -51483065 + (A)n Simple_repeat Simple_repeat 1 41 0 452 362 128 12 chr2 201774528 201774873 -51481710 + ERVL LTR ERVL 1905 2289 -3475 568 128 12 0 chr2 201775055 201775141 -51481442 + AluSg/x SINE Alu 207 293 -17 222 111 0 56 chr2 201775207 201775261 -51481322 + (TA)n Simple_repeat Simple_repeat 1 51 0 2270 102 47 3 chr2 201775265 201775607 -51480976 + L1PB1 LINE L1 5782 6138 -13 313 346 19 0 chr2 201775760 201775864 -51480719 + ERVL LTR ERVL 3382 3487 -2277 1186 270 97 53 chr2 201776226 201776629 -51479954 - L1M4c LINE L1 -5179 1101 717 228 67 0 0 chr2 201776629 201776659 -51479924 + (TTA)n Simple_repeat Simple_repeat 2 31 0 1703 146 0 78 chr2 201776661 201776982 -51479601 - AluSx SINE Alu -16 296 1 1186 270 97 53 chr2 201776982 201777563 -51479020 - L1M4c LINE L1 -5563 717 26 207 314 29 116 chr2 201778241 201778330 -51478253 + MIR SINE MIR 12 82 -180 1992 117 0 0 chr2 201778330 201778621 -51477962 - AluSx SINE Alu 0 311 21 207 314 29 116 chr2 201778621 201778702 -51477881 + MIR SINE MIR 82 168 -94 1783 122 6 57 chr2 201778713 201778975 -51477608 - L1MA3 LINE L1 -1 6304 6063 1889 77 8 0 chr2 201778975 201779222 -51477361 - AluY SINE Alu -62 249 1 1783 122 6 57 chr2 201779222 201779313 -51477270 - L1MA3 LINE L1 -242 6063 5969 25 31 0 0 chr2 201779394 201779426 -51477157 + AT_rich Low_complexity Low_complexity 1 32 0 3477 228 44 20 chr2 201780002 201780747 -51475836 + L1MD2 LINE L1 5377 6149 -210 195 42 0 0 chr2 201780747 201780771 -51475812 + (CA)n Simple_repeat Simple_repeat 1 24 0 3477 228 44 20 chr2 201780771 201780937 -51475646 + L1MD2 LINE L1 6149 6310 -49 1338 237 60 50 chr2 201781011 201781509 -51475074 + MLT1D LTR MaLR 3 505 0 473 230 81 42 chr2 201781649 201781910 -51474673 + L1MC5 LINE L1 7637 7907 -54 27 62 0 0 chr2 201782005 201782053 -51474530 + AT_rich Low_complexity Low_complexity 1 48 0 353 313 68 31 chr2 201782382 201782574 -51474009 - LTR67 LTR ERVL -1 556 358 314 315 63 21 chr2 201783314 201783457 -51473126 - ERVL LTR ERVL -467 5297 5149 1491 282 56 19 chr2 201783460 201784006 -51472577 + MLT1F1 LTR MaLR 3 567 0 534 254 45 31 chr2 201784870 201785094 -51471489 - L1MB8 LINE L1 0 6178 5952 1282 256 48 16 chr2 201785099 201785533 -51471050 - L1MB8 LINE L1 -913 5233 4786 192 163 0 0 chr2 201785718 201785761 -51470822 + (TG)n Simple_repeat Simple_repeat 2 44 0 243 88 0 0 chr2 201786209 201786243 -51470340 + (A)n Simple_repeat Simple_repeat 1 34 0 1534 154 111 40 chr2 201786425 201786694 -51469889 - THE1C LTR MaLR 0 375 74 6725 208 109 17 chr2 201786694 201788302 -51468281 + MER52A LTR ERV1 1 1755 0 1534 154 111 40 chr2 201788302 201788382 -51468201 - THE1C LTR MaLR -301 74 1 476 292 30 12 chr2 201788658 201788826 -51467757 + LTR41 LTR ERVL 10 180 -593 292 225 75 0 chr2 201789286 201789366 -51467217 + LTR50 LTR ERVL 710 795 0 216 0 0 0 chr2 201790881 201790905 -51465678 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1833 114 33 4 chr2 201790908 201791179 -51465404 - AluY SINE Alu -32 279 1 2132 122 3 10 chr2 201791626 201791937 -51464646 - AluSc SINE Alu 0 309 1 4791 226 52 43 chr2 201792058 201794849 -51461734 - L1MC2 LINE L1 -41 6303 3495 21 36 0 0 chr2 201794882 201794910 -51461673 + AT_rich Low_complexity Low_complexity 1 28 0 1037 123 18 6 chr2 201794911 201795081 -51461502 - HSMAR1 DNA Mariner -1 1286 1115 3153 234 12 1 chr2 201845092 201845837 -51410746 - L1P LINE L1 -876 5270 4518 21 57 0 0 chr2 201846067 201846102 -51410481 + AT_rich Low_complexity Low_complexity 1 35 0 340 215 0 35 chr2 201846298 201846442 -51410141 + (TA)n Simple_repeat Simple_repeat 2 140 0 270 264 0 22 chr2 201846443 201846534 -51410049 + L1MC4 LINE L1 6615 6703 -1339 345 260 0 0 chr2 201846534 201846638 -51409945 + (TA)n Simple_repeat Simple_repeat 2 105 0 241 274 0 63 chr2 201846640 201846735 -51409848 + L1MC4 LINE L1 6614 6702 -1340 317 222 17 17 chr2 201846739 201846856 -51409727 + (TA)n Simple_repeat Simple_repeat 2 118 0 34 0 0 0 chr2 201847046 201847080 -51409503 + AT_rich Low_complexity Low_complexity 1 34 0 21 104 0 0 chr2 201847399 201847476 -51409107 + AT_rich Low_complexity Low_complexity 1 77 0 1797 189 32 35 chr2 201848315 201848906 -51407677 + L1PA16 LINE L1 4876 5455 -710 24 53 0 0 chr2 201849735 201849773 -51406810 + AT_rich Low_complexity Low_complexity 1 38 0 27 29 0 0 chr2 201850064 201850098 -51406485 + AT_rich Low_complexity Low_complexity 1 34 0 21 71 0 0 chr2 201850267 201850309 -51406274 + AT_rich Low_complexity Low_complexity 1 42 0 1306 186 56 22 chr2 201850309 201850578 -51406005 - L1PA16 LINE L1 -9 6157 5880 600 90 0 0 chr2 201850578 201850667 -51405916 - L1PA6 LINE L1 0 6154 6066 3246 177 40 10 chr2 201850768 201851487 -51405096 + L1PA16 LINE L1 5425 6165 -1 240 387 82 10 chr2 201851503 201851893 -51404690 - L2 LINE L2 -1257 2057 1640 25 65 0 0 chr2 201852176 201852222 -51404361 + AT_rich Low_complexity Low_complexity 1 46 0 186 103 0 0 chr2 201852381 201852410 -51404173 + (T)n Simple_repeat Simple_repeat 1 29 0 240 254 0 51 chr2 201853433 201853492 -51403091 + MER90 LTR ERV1 5 60 -554 987 161 12 78 chr2 201853492 201853735 -51402848 - AluJb SINE Alu -1 311 85 429 190 25 0 chr2 201853736 201853815 -51402768 + MER90 LTR ERV1 98 178 -436 7018 207 18 53 chr2 201853918 201855785 -51400798 - L1MCa LINE L1 -2233 4193 2393 * 8238 162 22 8 chr2 201855775 201857301 -51399282 - L1PBa LINE L1 -4127 2736 1190 4895 174 50 11 chr2 201857443 201858392 -51398191 + L1PB1 LINE L1 4805 5812 -339 315 71 0 0 chr2 201858392 201858434 -51398149 + (CA)n Simple_repeat Simple_repeat 2 43 0 4895 174 50 11 chr2 201858434 201858785 -51397798 + L1PB1 LINE L1 5812 6148 -3 189 0 0 0 chr2 201858813 201858834 -51397749 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 629 321 76 9 chr2 201859294 201859518 -51397065 - MIR SINE MIR -5 257 19 1685 206 43 11 chr2 201859817 201860166 -51396417 + MLT1A1 LTR MaLR 1 360 -5 1026 156 6 0 chr2 201860777 201860937 -51395646 + AluJb SINE Alu 137 297 -15 10476 119 20 7 chr2 201861245 201862804 -51393779 - THE1A-int LTR MaLR 0 1580 1 2587 68 53 0 chr2 201862804 201863141 -51393442 - THE1A LTR MaLR 0 355 1 252 234 10 137 chr2 201863819 201864024 -51392559 - L1MDb LINE L1 -5457 952 774 228 175 70 0 chr2 201864834 201864891 -51391692 - L1MCa LINE L1 -4496 1930 1870 212 326 81 17 chr2 201865201 201865373 -51391210 + MIR SINE MIR 45 227 -35 564 247 30 60 chr2 201867176 201867342 -51389241 - MIR SINE MIR -95 167 7 514 259 17 0 chr2 201867481 201867597 -51388986 + MER94 DNA DNA 2 119 -15 2455 102 14 8 chr2 201868106 201868459 -51388124 + THE1A LTR MaLR 1 355 0 306 267 76 0 chr2 201868480 201868585 -51387998 - L1MC4 LINE L1 -995 7047 6935 429 294 11 17 chr2 201868598 201868775 -51387808 + L1 LINE L1 4072 4247 -1899 29 60 0 36 chr2 201869460 201869543 -51387040 + AT_rich Low_complexity Low_complexity 1 80 0 229 173 19 0 chr2 201870995 201871047 -51385536 + L1MC4 LINE L1 6650 6702 -1340 * 231 160 173 0 chr2 201871019 201871094 -51385489 - L1MC4 LINE L1 -1340 6702 6615 * 234 247 45 45 chr2 201871077 201871166 -51385417 + L1MC4 LINE L1 6614 6702 -1340 * 265 229 0 62 chr2 201871115 201871211 -51385372 - L1MC4 LINE L1 -1339 6703 6614 263 217 27 21 chr2 201871232 201871342 -51385241 - L1MCa LINE L1 -1340 6982 1995 282 206 0 0 chr2 201871342 201871405 -51385178 + (CATATA)n Simple_repeat Simple_repeat 1 63 0 275 250 0 62 chr2 201871407 201871503 -51385080 + L1MC4 LINE L1 6614 6703 -1339 256 209 45 0 chr2 201871475 201871542 -51385041 + L1MCa LINE L1 1995 2064 -4362 * 234 269 0 43 chr2 201871554 201871647 -51384936 + L1MC4 LINE L1 6615 6703 -1339 233 318 0 0 chr2 201871599 201871687 -51384896 - L1MC4 LINE L1 -1341 6701 6614 * 269 275 0 22 chr2 201871657 201871748 -51384835 + L1MC4 LINE L1 6614 6702 -1340 230 333 0 0 chr2 201871753 201871843 -51384740 - L1MC4 LINE L1 -1339 6703 6614 * 262 296 0 0 chr2 201871769 201871850 -51384733 + L1MC4 LINE L1 6616 6696 -1346 7390 145 41 11 chr2 201872134 201873327 -51383256 - THE1-int LTR MaLR -47 1533 305 183 156 0 0 chr2 201873327 201873359 -51383224 + GA-rich Low_complexity Low_complexity 3 34 0 2466 23 14 0 chr2 201873366 201873730 -51382853 - L1PA4 LINE L1 -601 5554 5187 4938 35 5 0 chr2 201873730 201874330 -51382253 + L1PA4 LINE L1 5548 6152 -3 435 202 0 0 chr2 201874343 201874437 -51382146 + GA-rich Low_complexity Low_complexity 3 96 0 21 57 0 0 chr2 201875149 201875184 -51381399 + AT_rich Low_complexity Low_complexity 1 35 0 2299 234 30 7 chr2 201875639 201876250 -51380333 - L1MB8 LINE L1 -3 6175 5551 259 361 25 0 chr2 201876427 201876546 -51380037 + L1MC4a LINE L1 5473 5594 -2214 313 317 73 15 chr2 201876622 201876827 -51379756 + L1MC4a LINE L1 5670 5886 -1922 5885 196 21 7 chr2 201876870 201878531 -51378052 + L1MC1 LINE L1 4590 6316 -17 243 61 0 0 chr2 201878594 201878627 -51377956 + (CAA)n Simple_repeat Simple_repeat 1 33 0 39 38 0 0 chr2 201879050 201879103 -51377480 + AT_rich Low_complexity Low_complexity 1 53 0 705 268 163 66 chr2 201879128 201880173 -51376410 - L1M4 LINE L1 -2316 3830 2685 361 263 216 11 chr2 201880286 201880476 -51376107 - L1M4 LINE L1 -3701 2445 2217 305 109 22 0 chr2 201880867 201880913 -51375670 + THE1C LTR MaLR 329 375 0 5701 110 9 21 chr2 201880913 201881784 -51374799 + L1PA12 LINE L1 5307 6167 -1 631 254 188 55 chr2 201881803 201882059 -51374524 - MSTD LTR MaLR -106 290 1 24 0 0 0 chr2 201882450 201882474 -51374109 + AT_rich Low_complexity Low_complexity 1 24 0 294 286 86 43 chr2 201882678 201882818 -51373765 + MIR SINE MIR 9 154 -108 988 178 33 61 chr2 201882818 201883032 -51373551 + MER46A DNA MER2_type 1 208 -28 22 0 0 0 chr2 201883894 201883916 -51372667 + AT_rich Low_complexity Low_complexity 1 22 0 25 95 0 0 chr2 201884197 201884271 -51372312 + AT_rich Low_complexity Low_complexity 1 74 0 926 138 43 5 chr2 201886625 201886813 -51369770 - L1MA4 LINE L1 -5 6295 6101 23 33 0 0 chr2 201888036 201888066 -51368517 + AT_rich Low_complexity Low_complexity 1 30 0 884 223 113 9 chr2 201889222 201889719 -51366864 - L1M4 LINE L1 -603 5575 5028 * 1246 211 100 16 chr2 201889696 201890065 -51366518 - L1M4 LINE L1 -1331 4815 4416 348 235 87 32 chr2 201890067 201890210 -51366373 - L1M4 LINE L1 -3863 2283 2134 373 273 25 6 chr2 201890228 201890706 -51365877 + (TA)n Simple_repeat Simple_repeat 1 486 0 333 0 0 0 chr2 201890706 201890743 -51365840 + (TG)n Simple_repeat Simple_repeat 2 38 0 508 229 25 0 chr2 201890838 201890956 -51365627 - L1MB1 LINE L1 -128 6040 5920 233 170 43 0 chr2 201890995 201891042 -51365541 + L1MB1 LINE L1 6108 6156 -12 396 79 13 40 chr2 201891053 201891129 -51365454 + (GAAA)n Simple_repeat Simple_repeat 3 76 0 272 401 57 26 chr2 201891389 201891581 -51365002 - L2 LINE L2 -2 3270 3073 24 0 0 0 chr2 201892047 201892071 -51364512 + AT_rich Low_complexity Low_complexity 1 24 0 240 260 14 14 chr2 201892200 201892273 -51364310 + (TG)n Simple_repeat Simple_repeat 2 74 0 2017 134 10 3 chr2 201893046 201893353 -51363230 + AluSx SINE Alu 1 309 -3 6307 138 23 36 chr2 201893817 201893896 -51362687 - Tigger1 DNA MER2_type -1317 1101 1023 2138 136 0 3 chr2 201893896 201894204 -51362379 + AluSx SINE Alu 1 307 -5 6307 138 23 36 chr2 201894204 201895237 -51361346 - Tigger1 DNA MER2_type -1395 1023 3 2319 149 50 48 chr2 201895241 201895696 -51360887 + Tigger3(Golem) DNA MER2_type 2573 3028 -1 592 276 20 10 chr2 201895898 201896232 -51360351 - AluYa5 SINE Alu 0 338 2 1098 161 14 40 chr2 201896538 201896761 -51359822 + MLT1A2-int LTR MaLR 1508 1724 -11 963 236 55 63 chr2 201896771 201897135 -51359448 + MLT1A2 LTR MaLR 1 361 -13 23 33 0 0 chr2 201897699 201897729 -51358854 + AT_rich Low_complexity Low_complexity 1 30 0 556 62 0 12 chr2 201898314 201898394 -51358189 + MADE1 DNA Mariner 1 79 -1 255 322 11 0 chr2 201900647 201900734 -51355849 - L1ME LINE L1 -539 5582 5495 261 42 139 14 chr2 201900935 201901007 -51355576 + (TTAA)n Simple_repeat Simple_repeat 4 84 0 1988 125 0 0 chr2 201901522 201901802 -51354781 + AluSx SINE Alu 33 312 0 12418 147 18 23 chr2 201902249 201904647 -51351936 + Tigger1 DNA MER2_type 1 2399 -19 234 221 11 66 chr2 201904756 201904937 -51351646 + (GGGTG)n Simple_repeat Simple_repeat 1 171 0 2329 179 47 2 chr2 201905097 201905545 -51351038 - L1PBa LINE L1 -6395 468 1 226 217 133 12 chr2 201906072 201906155 -51350428 - L1M4 LINE L1 -392 6180 6088 266 293 12 0 chr2 201906264 201906346 -51350237 - L1MC5 LINE L1 -722 7239 7157 236 212 110 20 chr2 201906640 201906786 -51349797 - L1M4 LINE L1 -953 5587 5429 1579 227 21 0 chr2 201907092 201907418 -51349165 - MER2 DNA MER2_type 0 345 13 2056 147 38 16 chr2 201907421 201907788 -51348795 + THE1C LTR MaLR 1 375 0 445 239 17 0 chr2 201907825 201907942 -51348641 - L1M4 LINE L1 -3646 2894 2776 2383 74 0 0 chr2 201908022 201908333 -51348250 - L1PA5 LINE L1 -3 6151 5841 317 299 94 16 chr2 201908333 201908453 -51348130 - L1M4 LINE L1 -4070 2651 2519 2282 112 0 0 chr2 201908573 201908869 -51347714 - AluSc SINE Alu -13 296 1 22 0 0 0 chr2 201909095 201909117 -51347466 + AT_rich Low_complexity Low_complexity 1 22 0 369 264 0 9 chr2 201909278 201909384 -51347199 - HAL1 LINE L1 -920 1587 1483 1606 142 20 0 chr2 201909419 201909666 -51346917 + AluSx SINE Alu 24 275 -37 844 139 8 0 chr2 201909666 201909812 -51346771 + AluSg/x SINE Alu 160 306 0 447 292 102 66 chr2 201909845 201910177 -51346406 - L1MEd LINE L1 -4871 1659 1307 3679 129 103 28 chr2 201910199 201911291 -51345292 + MER11A LTR ERVK 1 1236 0 235 140 35 18 chr2 201911291 201911348 -51345235 + T-rich Low_complexity Low_complexity 5 62 0 829 268 95 22 chr2 201912023 201912393 -51344190 - L1MB8 LINE L1 -2 6176 5780 1650 133 7 4 chr2 201912393 201912663 -51343920 - pTR5 LTR ERV1 -2052 386 116 361 292 105 24 chr2 201913848 201914057 -51342526 + LTR33A LTR ERVL 269 494 -29 21 0 0 0 chr2 201915300 201915321 -51341262 + AT_rich Low_complexity Low_complexity 1 21 0 198 91 0 0 chr2 201915723 201915756 -51340827 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 425 238 8 0 chr2 201916100 201916222 -51340361 + GA-rich Low_complexity Low_complexity 1 123 0 300 53 0 0 chr2 201917520 201917558 -51339025 + (TA)n Simple_repeat Simple_repeat 2 39 0 2177 104 7 0 chr2 201917558 201917845 -51338738 - AluSg SINE Alu -21 289 1 246 155 14 42 chr2 201917869 201917940 -51338643 + (TATATG)n Simple_repeat Simple_repeat 4 72 0 6122 161 43 10 chr2 201918658 201919853 -51336730 - L1PBa LINE L1 -4363 2500 1266 733 267 38 26 chr2 201919870 201920136 -51336447 - L1PBa LINE L1 -6589 274 6 28 29 0 0 chr2 201920216 201920251 -51336332 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr2 201920313 201920342 -51336241 + AT_rich Low_complexity Low_complexity 1 29 0 27 0 0 0 chr2 201920939 201920966 -51335617 + AT_rich Low_complexity Low_complexity 1 27 0 21 82 0 0 chr2 201923440 201923489 -51333094 + AT_rich Low_complexity Low_complexity 1 49 0 951 184 28 170 chr2 201924720 201925156 -51331427 + MLT1A2 LTR MaLR 1 374 0 21 57 0 0 chr2 201926601 201926636 -51329947 + AT_rich Low_complexity Low_complexity 1 35 0 205 49 0 49 chr2 201927122 201927163 -51329420 + (TA)n Simple_repeat Simple_repeat 2 40 0 477 152 25 0 chr2 201927300 201927379 -51329204 - Charlie5 DNA MER1_type -2513 99 19 2069 117 0 13 chr2 201927984 201928313 -51328270 + AluSx SINE Alu 4 312 0 244 322 91 58 chr2 201929317 201929559 -51327024 + L1MC/D LINE L1 5491 5740 -2068 392 81 0 16 chr2 201929830 201929892 -51326691 + (TA)n Simple_repeat Simple_repeat 1 61 0 2500 48 0 3 chr2 201930023 201930332 -51326251 + AluY SINE Alu 1 308 -3 12153 59 6 13 chr2 201930375 201932031 -51324552 + L1P LINE L1 1 1644 -4502 256 343 51 36 chr2 201932286 201932423 -51324160 - MER5B DNA MER1_type -22 156 18 28 0 0 0 chr2 201933511 201933539 -51323044 + AT_rich Low_complexity Low_complexity 1 28 0 375 313 86 0 chr2 201933576 201933704 -51322879 - MIR SINE MIR -56 206 68 2406 46 13 0 chr2 201934805 201935112 -51321471 + AluYa5 SINE Alu 1 311 0 342 336 8 8 chr2 201935259 201935390 -51321193 - MER2 DNA MER2_type -19 326 196 380 0 0 0 chr2 201935390 201935433 -51321150 - L1P2 LINE L1 -350 5804 5762 377 21 0 0 chr2 201935433 201935479 -51321104 + L1PA4 LINE L1 6108 6155 0 780 258 35 0 chr2 201935565 201935763 -51320820 - MER2 DNA MER2_type -139 206 2 360 315 77 23 chr2 201935998 201936258 -51320325 - L1ME3A LINE L1 -223 5947 5674 328 324 86 8 chr2 201936787 201937043 -51319540 + L1MEc LINE L1 1385 1660 -4736 502 154 2 16 chr2 201937212 201937318 -51319265 - L1MD1 LINE L1 -19 6223 6142 1010 175 48 0 chr2 201937331 201937520 -51319063 - MER2 DNA MER2_type -139 206 9 2209 202 53 52 chr2 201937534 201938172 -51318411 - L1MD1 LINE L1 -335 5907 5269 1199 232 128 26 chr2 201938251 201938782 -51317801 + L1M4 LINE L1 4631 5215 -931 370 109 0 16 chr2 201938952 201939016 -51317567 + L1MA9 LINE L1 6115 6177 -135 237 313 89 0 chr2 201939016 201939230 -51317353 + L1MEc LINE L1 2200 2432 -3783 7013 115 130 97 chr2 201939475 201941116 -51315467 - pTR5 LTR ERV1 0 2438 743 986 134 27 5 chr2 201941116 201941303 -51315280 + L1MA9 LINE L1 6102 6292 -20 1688 129 15 4 chr2 201941317 201941580 -51315003 - THE1A LTR MaLR 0 355 90 23 54 0 0 chr2 201942329 201942366 -51314217 + AT_rich Low_complexity Low_complexity 1 37 0 25 31 0 0 chr2 201943002 201943034 -51313549 + AT_rich Low_complexity Low_complexity 1 32 0 204 337 22 11 chr2 201943616 201943705 -51312878 + MIR SINE MIR 117 206 -56 21 36 0 0 chr2 201944120 201944148 -51312435 + AT_rich Low_complexity Low_complexity 1 28 0 263 285 140 100 chr2 201944263 201944428 -51312155 - MIR SINE MIR -38 224 48 1920 153 7 0 chr2 201944428 201944722 -51311861 + AluSp SINE Alu 1 296 -17 263 285 140 100 chr2 201944722 201944756 -51311827 - MIR SINE MIR -214 48 17 1838 271 45 42 chr2 201946071 201946194 -51310389 + L1M3e LINE L1 573 694 -6871 2031 143 39 36 chr2 201946194 201946557 -51310026 - THE1B LTR MaLR 0 364 1 1838 271 45 42 chr2 201946557 201947793 -51308790 + L1M3e LINE L1 694 2773 -4792 * 10437 41 1 0 chr2 201947780 201949087 -51307496 - L1P LINE L1 -2080 4066 2759 3996 34 0 0 chr2 201949088 201949562 -51307021 + L1PA5 LINE L1 5670 6143 -11 599 243 27 0 chr2 201949584 201949732 -51306851 + L1M3e LINE L1 2735 2886 -4679 533 246 15 10 chr2 201949757 201949960 -51306623 + L1M3e LINE L1 3038 3241 -4324 2186 183 26 28 chr2 201949982 201950480 -51306103 + L1PA13 LINE L1 4864 5360 -786 5077 111 19 5 chr2 201950626 201951409 -51305174 + L1PA13 LINE L1 5365 6158 -5 21 0 0 0 chr2 201951528 201951549 -51305034 + AT_rich Low_complexity Low_complexity 1 21 0 673 211 0 35 chr2 201951635 201951777 -51304806 - FLAM_C SINE Alu -6 137 1 2437 120 0 11 chr2 201952066 201952434 -51304149 + THE1B LTR MaLR 1 364 0 26 74 0 0 chr2 201954402 201954456 -51302127 + AT_rich Low_complexity Low_complexity 1 54 0 25 0 0 0 chr2 201954535 201954560 -51302023 + AT_rich Low_complexity Low_complexity 1 25 0 22 94 0 0 chr2 201954641 201954705 -51301878 + AT_rich Low_complexity Low_complexity 1 64 0 205 250 21 42 chr2 201954846 201954990 -51301593 + (TATAA)n Simple_repeat Simple_repeat 5 145 0 207 300 0 0 chr2 201955000 201955090 -51301493 + (TA)n Simple_repeat Simple_repeat 1 90 0 337 222 41 99 chr2 201955288 201955459 -51301124 + L1ME LINE L1 5625 5785 -377 21 0 0 0 chr2 201955761 201955782 -51300801 + AT_rich Low_complexity Low_complexity 1 21 0 34 42 0 0 chr2 201955829 201955877 -51300706 + AT_rich Low_complexity Low_complexity 1 48 0 23 68 0 0 chr2 201955907 201955951 -51300632 + AT_rich Low_complexity Low_complexity 1 44 0 37 39 0 0 chr2 201955990 201956041 -51300542 + AT_rich Low_complexity Low_complexity 1 51 0 329 323 58 0 chr2 201956297 201956452 -51300131 + L1M4b LINE L1 69 232 -6627 1289 243 41 44 chr2 201956578 201957191 -51299392 + L1M4 LINE L1 4877 5500 -678 884 240 66 50 chr2 201957193 201957659 -51298924 + MLT1B LTR MaLR 1 467 0 579 266 71 0 chr2 201957685 201957931 -51298652 + L1M4 LINE L1 5513 5791 -380 5657 107 77 18 chr2 201957931 201959238 -51297345 + pTR5 LTR ERV1 742 2243 -195 642 150 46 13 chr2 201960428 201960581 -51296002 + L1MA8 LINE L1 6130 6287 -4 1026 226 114 57 chr2 201960796 201961234 -51295349 + MLT1C LTR MaLR 5 467 0 783 286 28 24 chr2 201961289 201961472 -51295111 - Charlie2b DNA MER1_type -2111 671 485 1996 134 39 55 chr2 201961472 201961853 -51294730 + THE1C LTR MaLR 1 375 0 783 286 28 24 chr2 201961853 201961956 -51294627 - Charlie2b DNA MER1_type -2297 485 384 1131 136 30 5 chr2 201961988 201962186 -51294397 - L1PA14 LINE L1 -1 6160 5958 326 198 21 0 chr2 201962254 201962350 -51294233 + (TATG)n Simple_repeat Simple_repeat 3 100 0 350 256 24 40 chr2 201962392 201962517 -51294066 - Charlie2b DNA MER1_type -2651 131 9 562 155 0 0 chr2 201962540 201962624 -51293959 - Tigger7 DNA MER2_type -1 2586 2503 2811 193 6 8 chr2 201962630 201963147 -51293436 - Tigger7 DNA MER2_type -217 516 1 379 295 108 26 chr2 201963172 201963477 -51293106 + L1M4 LINE L1 3976 4305 -1841 22 0 0 0 chr2 201963477 201963499 -51293084 + AT_rich Low_complexity Low_complexity 1 22 0 319 346 78 22 chr2 201963632 201963863 -51292720 + L1M4 LINE L1 4524 4767 -1379 183 80 0 0 chr2 201964061 201964086 -51292497 + (TG)n Simple_repeat Simple_repeat 2 26 0 607 232 62 15 chr2 201965138 201965310 -51291273 - L1MDb LINE L1 -6250 293 35 826 270 61 34 chr2 201965316 201965760 -51290823 - L1MEc LINE L1 -4931 1465 1010 1863 195 30 47 chr2 201966134 201966564 -51290019 - MSTB1 LTR MaLR -1 431 9 1272 140 45 9 chr2 201966565 201966787 -51289796 + MER30 DNA MER1_type 1 230 0 2188 141 34 6 chr2 201967108 201967462 -51289121 - THE1B LTR MaLR 0 364 1 24 77 0 0 chr2 201967530 201967582 -51289001 + AT_rich Low_complexity Low_complexity 1 52 0 382 176 182 34 chr2 201968356 201968532 -51288051 + MER5C DNA MER1_type 117 318 -6 1959 164 50 63 chr2 201969010 201969473 -51287110 - MSTB2 LTR MaLR 0 457 1 1881 171 19 19 chr2 201969938 201970301 -51286282 + THE1B LTR MaLR 1 363 -1 538 263 86 40 chr2 201970506 201970681 -51285902 - MIR SINE MIR -44 218 36 23 33 0 0 chr2 201971744 201971774 -51284809 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr2 201972178 201972200 -51284383 + AT_rich Low_complexity Low_complexity 1 22 0 748 257 140 7 chr2 201972860 201973152 -51283431 + L1MDb LINE L1 64 394 -6015 11203 92 16 0 chr2 201973177 201975525 -51281058 + L1PA7 LINE L1 3776 6143 -11 398 261 46 7 chr2 201975673 201975826 -51280757 + L1M4 LINE L1 4366 4524 -1622 325 242 10 30 chr2 201975831 201975930 -51280653 - L1M4 LINE L1 -1446 4700 4604 850 276 30 30 chr2 201975940 201976338 -51280245 + L1M4 LINE L1 4528 4925 -1221 * 3221 280 75 21 chr2 201976320 201976578 -51280005 + L1M4 LINE L1 2351 2594 -3552 2414 164 35 13 chr2 201976578 201977029 -51279554 + LOR1b LTR ERV1 1 461 0 3221 280 75 21 chr2 201977029 201978465 -51278118 + L1M4 LINE L1 2594 4136 -2010 205 356 35 43 chr2 201978523 201978638 -51277945 + L2 LINE L2 3199 3312 -1 264 30 0 0 chr2 201978649 201978682 -51277901 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 24 32 0 0 chr2 201978865 201978896 -51277687 + AT_rich Low_complexity Low_complexity 1 31 0 22 88 0 0 chr2 201978953 201979010 -51277573 + AT_rich Low_complexity Low_complexity 1 57 0 27 0 0 0 chr2 201979265 201979292 -51277291 + AT_rich Low_complexity Low_complexity 1 27 0 22 70 0 0 chr2 201980481 201980524 -51276059 + AT_rich Low_complexity Low_complexity 1 43 0 21 36 0 0 chr2 201982084 201982112 -51274471 + AT_rich Low_complexity Low_complexity 1 28 0 744 271 83 45 chr2 201982306 201982642 -51273941 - MLT1H1 LTR MaLR 0 555 207 291 280 13 0 chr2 201982713 201982788 -51273795 - MLT1H1 LTR MaLR -479 76 1 1053 260 79 23 chr2 201982849 201983203 -51273380 + MLT1A2 LTR MaLR 1 374 0 24 0 0 0 chr2 201983982 201984006 -51272577 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr2 201984460 201984488 -51272095 + AT_rich Low_complexity Low_complexity 1 28 0 1998 136 3 3 chr2 201984949 201985236 -51271347 + AluSx SINE Alu 17 303 -9 194 337 119 17 chr2 201986526 201986781 -51269802 + L2 LINE L2 2733 3016 -256 233 348 76 0 chr2 201987013 201987131 -51269452 + L2 LINE L2 3146 3272 0 251 276 103 87 chr2 201987725 201987910 -51268673 + MER3 DNA MER1_type 22 209 0 * 656 270 27 22 chr2 201987749 201987934 -51268649 - MER3 DNA MER1_type 0 209 24 25 31 0 0 chr2 201988489 201988521 -51268062 + AT_rich Low_complexity Low_complexity 1 32 0 1520 229 16 16 chr2 201989003 201989366 -51267217 + MLT1A1 LTR MaLR 3 365 0 318 278 21 0 chr2 201989467 201989564 -51267019 + GA-rich Low_complexity Low_complexity 1 99 0 183 220 0 0 chr2 201989672 201989722 -51266861 + A-rich Low_complexity Low_complexity 4 53 0 21 36 0 0 chr2 201990962 201990990 -51265593 + AT_rich Low_complexity Low_complexity 1 28 0 1634 228 51 17 chr2 201991481 201992283 -51264300 + L1MB8 LINE L1 4838 5672 -512 376 143 26 26 chr2 201992303 201992380 -51264203 - L1M4 LINE L1 -460 5718 5642 189 74 0 0 chr2 201992380 201992407 -51264176 + (TA)n Simple_repeat Simple_repeat 2 28 0 1578 218 34 46 chr2 201992408 201992912 -51263671 + L1MB8 LINE L1 5678 6175 -3 356 282 69 0 chr2 201993000 201993131 -51263452 + L1M4 LINE L1 3136 3275 -2871 233 180 120 0 chr2 201993281 201993331 -51263252 + MER34C LTR ERV1 43 98 -487 30 0 0 0 chr2 201993748 201993778 -51262805 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr2 201994303 201994331 -51262252 + AT_rich Low_complexity Low_complexity 1 28 0 198 209 0 0 chr2 201994678 201994721 -51261862 + CT-rich Low_complexity Low_complexity 1 43 0 589 326 56 21 chr2 201995645 201995878 -51260705 - MIR SINE MIR -4 258 18 30 27 0 0 chr2 201996524 201996561 -51260022 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr2 201997091 201997113 -51259470 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 201997640 201997661 -51258922 + AT_rich Low_complexity Low_complexity 1 21 0 1250 128 0 5 chr2 201997708 201997895 -51258688 - AluSq SINE Alu -127 186 1 35 54 0 0 chr2 201998357 201998413 -51258170 + AT_rich Low_complexity Low_complexity 1 56 0 216 151 38 0 chr2 201998413 201998466 -51258117 + A-rich Low_complexity Low_complexity 1 55 0 24 32 0 0 chr2 201998761 201998792 -51257791 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr2 201999996 202000017 -51256566 + AT_rich Low_complexity Low_complexity 1 21 0 248 332 70 21 chr2 202000138 202000325 -51256258 - L2 LINE L2 0 3313 3118 21 36 0 0 chr2 202000573 202000601 -51255982 + AT_rich Low_complexity Low_complexity 1 28 0 25 51 0 0 chr2 202000660 202000699 -51255884 + AT_rich Low_complexity Low_complexity 1 39 0 249 207 147 7 chr2 202002444 202002594 -51253989 - L1M4 LINE L1 -2914 3730 3560 3901 83 11 16 chr2 202002666 202003219 -51253364 - L1PA11 LINE L1 -2 6172 5623 472 269 13 7 chr2 202003221 202003370 -51253213 - L1M4 LINE L1 -3337 3307 3158 403 258 71 3 chr2 202003495 202003636 -51252947 - L1MB5 LINE L1 -1 6177 6032 876 179 195 0 chr2 202003713 202003908 -51252675 - L1PA16 LINE L1 -9 6157 5925 26 0 0 0 chr2 202004004 202004030 -51252553 + AT_rich Low_complexity Low_complexity 1 26 0 297 0 0 0 chr2 202004175 202004208 -51252375 + (GA)n Simple_repeat Simple_repeat 2 34 0 284 340 0 0 chr2 202004418 202004512 -51252071 - L1M4 LINE L1 -6441 101 8 375 282 42 70 chr2 202004524 202004836 -51251747 - L1M4 LINE L1 -3657 2489 2187 323 297 23 8 chr2 202004847 202004975 -51251608 + L1M4 LINE L1 4477 4606 -1540 607 243 107 24 chr2 202055694 202055863 -51200720 + MIR SINE MIR 25 207 -55 21 0 0 0 chr2 202055948 202055969 -51200614 + AT_rich Low_complexity Low_complexity 1 21 0 2337 238 14 21 chr2 202055980 202056610 -51199973 - L1P LINE L1 -2458 3688 3063 745 176 77 41 chr2 202056600 202056821 -51199762 + L1P4 LINE L1 5465 5693 -473 * 8785 87 5 14 chr2 202057007 202058275 -51198308 + HERVH LTR ERV1 1740 2995 -4718 5955 88 6 8 chr2 202058254 202059110 -51197473 + HERVH LTR ERV1 3140 3993 -3720 * 4291 154 1 5 chr2 202059101 202059775 -51196808 + HERVH LTR ERV1 4478 5149 -2564 * 1383 134 19 0 chr2 202059776 202059992 -51196591 + HERVH LTR ERV1 5600 5819 -1894 * 2139 123 62 13 chr2 202059990 202060364 -51196219 + HERVH LTR ERV1 7322 7713 0 2727 80 92 5 chr2 202060364 202060776 -51195807 + LTR7 LTR ERV1 1 448 -2 393 214 20 0 chr2 202060779 202060877 -51195706 - L1ME1 LINE L1 -263 5903 5804 932 195 73 5 chr2 202060896 202061101 -51195482 - MER2 DNA MER2_type -3 342 124 4266 128 39 96 chr2 202061394 202062384 -51194199 + pTR5 LTR ERV1 743 1676 -762 4179 259 63 30 chr2 202062389 202063844 -51192739 - L1M4c LINE L1 -1579 5378 3632 2286 83 0 3 chr2 202063844 202064144 -51192439 + AluY SINE Alu 5 303 -8 4179 259 63 30 chr2 202064144 202064711 -51191872 - L1M4c LINE L1 -3325 3632 3085 388 311 58 14 chr2 202064729 202065092 -51191491 - L1M4c LINE L1 -3935 3024 2646 357 178 51 7 chr2 202065132 202065411 -51191172 + (TA)n Simple_repeat Simple_repeat 1 291 0 243 271 0 24 chr2 202065467 202065552 -51191031 - L1MC4 LINE L1 -1345 6697 6615 1943 298 50 37 chr2 202065571 202066272 -51190311 - L1M4c LINE L1 -5999 860 151 4116 118 26 26 chr2 202066409 202067384 -51189199 - HERVH LTR ERV1 -6645 1068 1 2661 83 98 5 chr2 202067386 202067796 -51188787 - LTR7 LTR ERV1 -2 448 1 502 245 69 27 chr2 202067828 202068016 -51188567 + L1ME2 LINE L1 5935 6130 -34 26 30 0 0 chr2 202068129 202068162 -51188421 + AT_rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr2 202069524 202069547 -51187036 + AT_rich Low_complexity Low_complexity 1 23 0 1015 246 86 24 chr2 202069730 202070104 -51186479 - MER110A LTR ERV1 -71 397 1 464 365 76 0 chr2 202070519 202070716 -51185867 - MLT1I LTR MaLR -93 316 105 25 0 0 0 chr2 202071641 202071666 -51184917 + AT_rich Low_complexity Low_complexity 1 25 0 30 69 0 0 chr2 202071748 202071806 -51184777 + AT_rich Low_complexity Low_complexity 1 58 0 21 0 0 0 chr2 202072197 202072218 -51184365 + AT_rich Low_complexity Low_complexity 1 21 0 297 0 0 0 chr2 202072552 202072585 -51183998 + (TG)n Simple_repeat Simple_repeat 2 34 0 2913 164 17 48 chr2 202073814 202074453 -51182130 - L1MC1 LINE L1 -393 5940 5322 22 35 0 0 chr2 202075329 202075358 -51181225 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr2 202075373 202075402 -51181181 + AT_rich Low_complexity Low_complexity 1 29 0 2534 167 75 40 chr2 202075558 202076133 -51180450 + LTR49 LTR ERV1 1 595 0 805 172 52 6 chr2 202076177 202076351 -51180232 - Tigger1 DNA MER2_type -1 2417 2236 4550 240 40 16 chr2 202076363 202077972 -51178611 - L1PA13 LINE L1 -4040 2757 1095 2087 292 104 34 chr2 202077992 202078722 -51177861 - L1PA13 LINE L1 -5990 797 17 4444 159 50 5 chr2 202078722 202079510 -51177073 - Tigger1 DNA MER2_type -1398 1020 198 750 201 38 31 chr2 202079507 202079732 -51176851 - MER61D LTR ERV1 -14 749 338 * 293 138 0 17 chr2 202080342 202080400 -51176183 + (TA)n Simple_repeat Simple_repeat 1 57 0 1585 214 96 47 chr2 202080525 202081015 -51175568 + MER67D LTR ERV1 1 514 0 22 0 0 0 chr2 202082026 202082048 -51174535 + AT_rich Low_complexity Low_complexity 1 22 0 432 265 193 27 chr2 202082664 202082887 -51173696 + MIR SINE MIR 3 262 0 2201 96 38 0 chr2 202083330 202083622 -51172961 + AluSx SINE Alu 1 303 -9 29 28 0 0 chr2 202084804 202084840 -51171743 + AT_rich Low_complexity Low_complexity 1 36 0 277 314 95 0 chr2 202085127 202085232 -51171351 + L2 LINE L2 3158 3272 0 1271 54 6 12 chr2 202085502 202085669 -51170914 + L1PA7 LINE L1 5987 6152 -2 269 56 0 0 chr2 202085768 202085810 -51170773 + L1MEd LINE L1 1564 1612 -4918 1936 115 42 14 chr2 202085971 202086259 -51170324 - AluSg SINE Alu -14 296 1 363 305 71 7 chr2 202087601 202087662 -51168921 - L1M4b LINE L1 -6700 159 103 333 0 0 0 chr2 202087662 202087699 -51168884 + (TG)n Simple_repeat Simple_repeat 1 37 0 258 32 0 0 chr2 202087701 202087732 -51168851 + (GA)n Simple_repeat Simple_repeat 2 32 0 363 305 71 7 chr2 202087732 202087808 -51168775 - L1M4b LINE L1 -6756 103 10 1332 50 0 0 chr2 202087996 202088156 -51168427 + AluY SINE Alu 135 294 -17 27 29 0 0 chr2 202088838 202088872 -51167711 + AT_rich Low_complexity Low_complexity 1 34 0 23 0 0 0 chr2 202088995 202089018 -51167565 + AT_rich Low_complexity Low_complexity 1 23 0 183 80 0 0 chr2 202091338 202091363 -51165220 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 6475 22 18 1 chr2 202091363 202092129 -51164454 - L1PA4 LINE L1 -12 6143 5365 28 71 0 0 chr2 202092424 202092480 -51164103 + AT_rich Low_complexity Low_complexity 1 56 0 5151 170 36 26 chr2 202092600 202093931 -51162652 - L1MA4 LINE L1 -20 6982 5634 262 340 0 0 chr2 202094613 202094719 -51161864 + (TGG)n Simple_repeat Simple_repeat 3 108 0 198 0 0 0 chr2 202095247 202095269 -51161314 + (T)n Simple_repeat Simple_repeat 1 22 0 4669 231 31 58 chr2 202095663 202097751 -51158832 - L1MA4 LINE L1 -2300 4548 2530 1991 131 7 10 chr2 202097751 202098048 -51158535 + AluSx SINE Alu 1 296 -16 4669 231 31 58 chr2 202098048 202098148 -51158435 - L1MA4 LINE L1 -4318 2530 2429 186 43 0 0 chr2 202098148 202098171 -51158412 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 735 239 18 6 chr2 202098293 202098456 -51158127 - Tigger1 DNA MER2_type -2252 166 2 1187 240 31 29 chr2 202099063 202099526 -51157057 - L1 LINE L1 -3581 3627 2964 850 207 0 24 chr2 202099526 202099690 -51156893 - FRAM SINE Alu -6 160 1 1187 240 31 29 chr2 202099690 202099744 -51156839 - L1 LINE L1 -4244 2964 2912 288 276 117 25 chr2 202099757 202099920 -51156663 - L1 LINE L1 -5679 1530 1353 1945 130 7 0 chr2 202102101 202102378 -51154205 + AluSx SINE Alu 1 279 -33 210 197 40 40 chr2 202102713 202102789 -51153794 + (TTTAA)n Simple_repeat Simple_repeat 5 80 0 210 312 14 21 chr2 202103258 202103399 -51153184 + (TA)n Simple_repeat Simple_repeat 2 141 0 313 315 84 29 chr2 202103424 202103662 -51152921 - L1MC4a LINE L1 -1879 5929 5679 236 270 140 10 chr2 202103773 202103873 -51152710 + HAL1 LINE L1 586 698 -1809 1593 317 34 41 chr2 202104565 202105784 -51150799 - HERVI LTR ERV1 -138 7647 5303 292 317 8 8 chr2 202106190 202106310 -51150273 - HERVI LTR ERV1 -1792 4857 4738 2306 341 30 26 chr2 202106532 202108159 -51148424 - HERVI LTR ERV1 -2029 5756 4124 2337 314 54 45 chr2 202108199 202110944 -51145639 - HERVI LTR ERV1 -3674 4111 969 449 327 12 0 chr2 202111148 202111310 -51145273 - HERVI LTR ERV1 -6837 948 785 332 311 68 47 chr2 202112353 202112543 -51144040 + HAL1 LINE L1 760 953 -1554 237 261 31 0 chr2 202112543 202112608 -51143975 + GA-rich Low_complexity Low_complexity 1 67 0 680 289 115 44 chr2 202112627 202113419 -51143164 + HAL1 LINE L1 884 1731 -776 1599 272 109 16 chr2 202114759 202115499 -51141084 + MER97a DNA MER1_type? 86 894 0 247 96 39 0 chr2 202115505 202115557 -51141026 + (CA)n Simple_repeat Simple_repeat 2 55 0 426 183 139 0 chr2 202115845 202115960 -51140623 + L1MA6 LINE L1 6086 6216 -84 22 0 0 0 chr2 202116166 202116188 -51140395 + GC_rich Low_complexity Low_complexity 1 22 0 297 0 0 0 chr2 202116193 202116226 -51140357 + (T)n Simple_repeat Simple_repeat 1 33 0 1108 48 0 0 chr2 202116226 202116352 -51140231 - AluY SINE Alu -179 132 7 264 122 0 0 chr2 202116643 202116684 -51139899 + (TA)n Simple_repeat Simple_repeat 2 42 0 254 237 0 32 chr2 202116685 202116778 -51139805 - L1MC4 LINE L1 -1339 6703 6614 * 287 218 35 0 chr2 202116703 202116790 -51139793 + L1MC4 LINE L1 6614 6703 -1339 2238 245 90 19 chr2 202117421 202118244 -51138339 - L1ME1 LINE L1 -5 6161 5281 1690 239 62 20 chr2 202118351 202118904 -51137679 - L1ME1 LINE L1 -1966 4180 3605 5317 218 38 78 chr2 202118926 202119491 -51137092 + L1MC3 LINE L1 6081 6667 -1118 226 236 0 0 chr2 202119491 202119546 -51137037 + LTR66 LTR ERVL 394 448 -162 5317 218 38 78 chr2 202119546 202120659 -51135924 + L1MC3 LINE L1 6667 7743 -42 24 53 0 0 chr2 202120978 202121016 -51135567 + AT_rich Low_complexity Low_complexity 1 38 0 1578 184 68 41 chr2 202121419 202121784 -51134799 - MLT1B LTR MaLR 0 390 16 26 64 0 0 chr2 202121800 202121847 -51134736 + AT_rich Low_complexity Low_complexity 1 47 0 1431 259 97 39 chr2 202122242 202123013 -51133570 - MER69 DNA AcHobo -245 2281 1466 4630 150 10 32 chr2 202123726 202124545 -51132038 - Tigger1 DNA MER2_type -25 2393 1593 344 264 198 0 chr2 202124577 202124698 -51131885 - L2 LINE L2 -492 2822 2678 258 257 9 34 chr2 202124704 202124865 -51131718 + L1MEc LINE L1 1360 1409 -5450 380 269 15 31 chr2 202124866 202124996 -51131587 + L1ME1 LINE L1 5569 5699 -485 2165 235 62 109 chr2 202125051 202125897 -51130686 - MER21B LTR ERV1 -55 808 3 598 318 85 6 chr2 202125921 202126286 -51130297 + L1ME1 LINE L1 5764 6157 -9 1669 132 71 71 chr2 202126817 202127181 -51129402 - THE1C LTR MaLR -11 364 1 38 22 0 0 chr2 202127187 202127232 -51129351 + AT_rich Low_complexity Low_complexity 1 45 0 367 326 29 21 chr2 202127326 202127565 -51129018 + L1ME3A LINE L1 5090 5330 -816 246 304 106 33 chr2 202127777 202128069 -51128514 + L1ME3A LINE L1 5625 5937 -233 36 62 0 0 chr2 202128271 202128335 -51128248 + AT_rich Low_complexity Low_complexity 1 64 0 21 0 0 0 chr2 202128593 202128614 -51127969 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr2 202128640 202128670 -51127913 + AT_rich Low_complexity Low_complexity 1 30 0 235 268 0 0 chr2 202128859 202128915 -51127668 - MLT1E LTR MaLR -506 87 32 520 272 143 34 chr2 202129010 202129058 -51127525 + L1ME LINE L1 3448 3489 -2657 1247 203 19 55 chr2 202129058 202129369 -51127214 + AluJo SINE Alu 4 303 -9 520 272 143 34 chr2 202129369 202129614 -51126969 + L1ME LINE L1 3489 3773 -2373 1257 184 82 12 chr2 202129653 202130070 -51126513 - LTR48 LTR ERV1 -40 747 142 2039 240 22 24 chr2 202130193 202130742 -51125841 + L1MC3 LINE L1 7024 7571 -214 2225 269 41 23 chr2 202130762 202131424 -51125159 + L1M3f LINE L1 14 687 -4641 4839 232 49 16 chr2 202131429 202132246 -51124337 + L1M3f LINE L1 860 1750 -4578 245 51 26 0 chr2 202132246 202132285 -51124298 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 4839 232 49 16 chr2 202132285 202132957 -51123626 + L1M3f LINE L1 1750 2398 -3930 12206 215 36 21 chr2 202132996 202133128 -51123455 + L1M3f LINE L1 2407 2536 -3792 2080 105 0 49 chr2 202133128 202133453 -51123130 + AluSc SINE Alu 1 309 0 12206 215 36 21 chr2 202133453 202133577 -51123006 + L1M3f LINE L1 2536 2657 -3671 201 74 0 0 chr2 202133577 202133604 -51122979 + (CATA)n Simple_repeat Simple_repeat 2 28 0 12206 215 36 21 chr2 202133604 202135291 -51121292 + L1M3f LINE L1 2657 4318 -2010 1400 74 5 0 chr2 202135291 202135481 -51121102 - L1PA13 LINE L1 0 6163 5973 12206 215 36 21 chr2 202135481 202136005 -51120578 + L1M3f LINE L1 4318 4833 -1495 1395 197 153 29 chr2 202136005 202136391 -51120192 + Tigger2a DNA MER2_type 1 434 0 12206 215 36 21 chr2 202136391 202137033 -51119550 + L1M3f LINE L1 4833 5564 -764 555 294 72 19 chr2 202137060 202137333 -51119250 + L1ME LINE L1 4823 5123 -1023 1599 233 122 0 chr2 202137333 202137783 -51118800 + MLT1D LTR MaLR 1 505 0 555 294 72 19 chr2 202137783 202137886 -51118697 + L1ME LINE L1 5123 5219 -927 447 222 46 33 chr2 202137962 202138115 -51118468 + L1ME3 LINE L1 5803 5957 -205 693 228 123 49 chr2 202138161 202138446 -51118137 + L1ME LINE L1 5259 5564 -600 3108 199 211 28 chr2 202138446 202139256 -51117327 - MER52A LTR ERV1 -797 958 1 192 152 0 0 chr2 202140716 202140749 -51115834 + (TA)n Simple_repeat Simple_repeat 2 34 0 271 268 12 12 chr2 202140851 202140933 -51115650 + (TA)n Simple_repeat Simple_repeat 2 83 0 894 231 5 5 chr2 202141074 202141260 -51115323 - MLT1A2 LTR MaLR 0 374 189 238 228 13 13 chr2 202141311 202141390 -51115193 - L1MA5A LINE L1 0 6297 6219 294 95 0 0 chr2 202141392 202141434 -51115149 + (TA)n Simple_repeat Simple_repeat 1 42 0 4381 104 0 0 chr2 202141586 202142204 -51114379 - L1P LINE L1 -4860 1286 669 412 245 79 28 chr2 202142313 202142529 -51114054 - L1ME LINE L1 -678 5484 5258 1893 161 25 5 chr2 202142537 202142912 -51113671 + LTR28 LTR ERV1 3 389 -247 418 266 99 67 chr2 202143026 202143249 -51113334 - L1ME LINE L1 -1432 4714 4500 1893 143 11 0 chr2 202143249 202143554 -51113029 - AluSg SINE Alu 0 308 1 418 266 99 67 chr2 202143554 202143955 -51112628 - L1ME LINE L1 -1646 4500 4068 23 0 0 0 chr2 202144088 202144111 -51112472 + AT_rich Low_complexity Low_complexity 1 23 0 789 171 18 0 chr2 202144823 202144987 -51111596 + L1MA4 LINE L1 6130 6296 -4 21 0 0 0 chr2 202145002 202145023 -51111560 + AT_rich Low_complexity Low_complexity 1 21 0 264 231 137 43 chr2 202146103 202146220 -51110363 + MIR SINE MIR 124 251 -11 263 243 117 47 chr2 202146378 202146592 -51109991 + Charlie7 DNA MER1_type 2383 2611 -1 23 33 0 0 chr2 202146726 202146756 -51109827 + AT_rich Low_complexity Low_complexity 1 30 0 21 57 0 0 chr2 202148363 202148398 -51108185 + AT_rich Low_complexity Low_complexity 1 35 0 853 118 16 0 chr2 202148551 202148678 -51107905 - AluSg SINE Alu -178 132 4 1170 190 0 0 chr2 202148980 202149203 -51107380 + AluJb SINE Alu 87 309 0 37 0 0 0 chr2 202149438 202149475 -51107108 + AT_rich Low_complexity Low_complexity 1 37 0 1219 262 47 64 chr2 202149528 202149995 -51106588 + MLT1C LTR MaLR 1 467 0 41 93 0 0 chr2 202150184 202150302 -51106281 + AT_rich Low_complexity Low_complexity 1 118 0 24 53 0 0 chr2 202150323 202150361 -51106222 + AT_rich Low_complexity Low_complexity 1 38 0 228 182 36 0 chr2 202150411 202150466 -51106117 + (TAGA)n Simple_repeat Simple_repeat 1 57 0 535 266 84 27 chr2 202151454 202151735 -51104848 - L1ME1 LINE L1 -63 6103 5814 25 0 0 0 chr2 202152612 202152637 -51103946 + AT_rich Low_complexity Low_complexity 1 25 0 2108 178 59 0 chr2 202152679 202153067 -51103516 - MER61C LTR ERV1 -10 424 14 254 262 0 0 chr2 202153035 202153096 -51103487 - LTR28 LTR ERV1 -959 61 1 * 25 0 0 0 chr2 202153146 202153171 -51103412 + AT_rich Low_complexity Low_complexity 1 25 0 22 70 0 0 chr2 202153366 202153409 -51103174 + AT_rich Low_complexity Low_complexity 1 43 0 21 57 0 0 chr2 202153828 202153863 -51102720 + AT_rich Low_complexity Low_complexity 1 35 0 1815 178 20 48 chr2 202154222 202154714 -51101869 + MER4A LTR ERV1 1 522 -177 1513 97 44 0 chr2 202154748 202154976 -51101607 - L1PA14 LINE L1 -4 6157 5920 511 234 25 45 chr2 202155000 202155201 -51101382 + MER4C LTR ERV1 269 465 0 2331 138 2 58 chr2 202155344 202155771 -51100812 + MER57A LTR ERV1 1 403 0 3463 210 22 47 chr2 202155773 202156620 -51099963 + MER57A-int LTR ERV1 3 828 -6709 376 304 38 27 chr2 202156723 202156907 -51099676 + MER57A-int LTR ERV1 815 1000 -4123 * 799 273 50 12 chr2 202156894 202157136 -51099447 + MER34C LTR ERV1 155 405 -180 236 259 182 47 chr2 202157167 202157337 -51099246 - LTR48 LTR ERV1 -420 367 175 406 194 86 108 chr2 202157445 202157637 -51098946 + MER57A-int LTR ERV1 1743 2511 -2360 278 205 36 0 chr2 202157794 202157877 -51098706 + MER57A-int LTR ERV1 3465 3550 -2781 4016 121 18 68 chr2 202157877 202158597 -51097986 - LTR12 LTR ERV1 0 688 5 1928 235 35 28 chr2 202158611 202159212 -51097371 - pTR5 LTR ERV1 -1092 1346 742 23 0 0 0 chr2 202159403 202159426 -51097157 + AT_rich Low_complexity Low_complexity 1 23 0 698 161 36 0 chr2 202159436 202159576 -51097007 + FLAM_C SINE Alu 1 144 0 4823 191 60 58 chr2 202159580 202161104 -51095479 + MER57A-int LTR ERV1 3756 5805 -1582 2901 96 55 31 chr2 202161104 202161581 -51095002 - LTR22B LTR ERVK -4 488 1 1708 209 60 49 chr2 202161928 202162468 -51094115 + MER57A-int LTR ERV1 3897 4181 -690 3648 215 56 33 chr2 202162711 202162762 -51093821 + MER57A-int LTR ERV1 6207 6255 -1282 1559 142 17 0 chr2 202162762 202163001 -51093582 - AluSg SINE Alu -12 298 56 3648 215 56 33 chr2 202163001 202163865 -51092718 + MER57A-int LTR ERV1 6255 7143 -394 618 183 125 102 chr2 202163866 202164086 -51092497 + LTR54 LTR ERV1 1 278 -220 180 0 0 0 chr2 202164086 202164106 -51092477 + (CAA)n Simple_repeat Simple_repeat 2 21 0 618 183 125 102 chr2 202164106 202164218 -51092365 + LTR54 LTR ERV1 278 386 -112 375 171 91 23 chr2 202164220 202164308 -51092275 + MER57A-int LTR ERV1 7437 7530 -7 1938 167 5 82 chr2 202164315 202164431 -51092152 + MER57A LTR ERV1 1 124 -279 2186 127 48 20 chr2 202164431 202164785 -51091798 + THE1B LTR MaLR 1 364 0 1938 167 5 82 chr2 202164785 202165105 -51091478 + MER57A LTR ERV1 124 403 0 357 282 169 8 chr2 202165432 202165556 -51091027 - MIR SINE MIR -118 144 1 262 300 100 10 chr2 202165556 202165656 -51090927 + L2 LINE L2 3203 3311 -2 186 43 0 0 chr2 202166101 202166124 -51090459 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 237 33 0 0 chr2 202166152 202166182 -51090401 + (T)n Simple_repeat Simple_repeat 1 30 0 2092 128 0 0 chr2 202166671 202166967 -51089616 - AluSx SINE Alu -16 296 1 338 203 116 50 chr2 202167503 202167622 -51088961 + MER39 LTR ERV1 1 134 -573 1086 218 111 41 chr2 202167622 202167966 -51088617 + MER39 LTR ERV1 340 707 0 21 0 0 0 chr2 202168420 202168441 -51088142 + AT_rich Low_complexity Low_complexity 1 21 0 1508 271 53 52 chr2 202168441 202169007 -51087576 - MLT1F1 LTR MaLR -2 565 1 30 32 0 48 chr2 202170166 202170229 -51086354 + AT_rich Low_complexity Low_complexity 1 60 0 2248 51 0 4 chr2 202170391 202170665 -51085918 + AluY SINE Alu 35 307 -4 23 33 0 0 chr2 202171320 202171350 -51085233 + AT_rich Low_complexity Low_complexity 1 30 0 327 311 0 0 chr2 202172761 202172851 -51083732 + MIR SINE MIR 163 252 -10 23 54 0 0 chr2 202173631 202173668 -51082915 + AT_rich Low_complexity Low_complexity 1 37 0 804 180 37 25 chr2 202173911 202174072 -51082511 + FRAM SINE Alu 1 162 -14 1186 101 0 6 chr2 202174385 202174553 -51082030 - AluSg/x SINE Alu -11 301 135 2808 255 46 23 chr2 202174665 202175497 -51081086 - L1M2 LINE L1 -4878 2331 1154 24 77 0 0 chr2 202176957 202177009 -51079574 + AT_rich Low_complexity Low_complexity 1 52 0 33 25 0 0 chr2 202177833 202177873 -51078710 + AT_rich Low_complexity Low_complexity 1 40 0 425 267 67 27 chr2 202178152 202178341 -51078242 - MLT1H LTR MaLR -304 245 13 21 36 0 0 chr2 202178343 202178371 -51078212 + AT_rich Low_complexity Low_complexity 1 28 0 198 150 0 0 chr2 202178918 202178958 -51077625 + (TA)n Simple_repeat Simple_repeat 2 41 0 192 158 0 0 chr2 202179044 202179082 -51077501 + (CA)n Simple_repeat Simple_repeat 2 39 0 23 0 0 0 chr2 202180479 202180502 -51076081 + AT_rich Low_complexity Low_complexity 1 23 0 197 368 92 13 chr2 202180611 202180850 -51075733 - MIR SINE MIR 0 262 5 1075 245 39 60 chr2 202181156 202181569 -51075014 + MLT1D LTR MaLR 21 424 -81 1097 332 31 37 chr2 202182279 202182369 -51074214 - MERVL LTR ERVL -2569 2916 2827 3216 155 22 72 chr2 202182369 202183096 -51073487 + LTR8 LTR ERV1 1 691 0 1097 332 31 37 chr2 202183096 202183796 -51072787 - MERVL LTR ERVL -2658 2827 2333 10643 239 35 17 chr2 202184265 202189578 -51067005 - L1PA16 LINE L1 -1 7603 2045 255 103 0 0 chr2 202189628 202189667 -51066916 + (TG)n Simple_repeat Simple_repeat 1 39 0 322 332 88 84 chr2 202189947 202190221 -51066362 - L1M2 LINE L1 -5782 1067 793 1855 151 48 0 chr2 202190350 202190661 -51065922 - THE1B LTR MaLR 0 364 39 265 270 0 0 chr2 202190661 202190724 -51065859 - L1PA16 LINE L1 -7508 73 11 12581 166 46 9 chr2 202190880 202191853 -51064730 + Tigger1 DNA MER2_type 1 937 -1481 1944 128 31 10 chr2 202191853 202192143 -51064440 - AluSx SINE Alu -16 296 1 12581 166 46 9 chr2 202192143 202193501 -51063082 + Tigger1 DNA MER2_type 937 2418 0 772 227 34 14 chr2 202194959 202195166 -51061417 - L2 LINE L2 -7 3306 3096 611 287 43 19 chr2 202195929 202196138 -51060445 - L2 LINE L2 -405 2909 2696 792 259 30 114 chr2 202196150 202196624 -51059959 - L2 LINE L2 -1111 2203 1770 33 73 0 0 chr2 202196640 202196708 -51059875 + AT_rich Low_complexity Low_complexity 1 68 0 471 298 72 34 chr2 202196728 202196936 -51059647 - MLT1I LTR MaLR -4 405 190 2135 155 83 10 chr2 202196936 202197335 -51059248 + MSTA LTR MaLR 1 428 0 32 26 0 0 chr2 202197597 202197636 -51058947 + AT_rich Low_complexity Low_complexity 1 39 0 419 314 51 0 chr2 202198126 202198263 -51058320 - MIR SINE MIR -71 191 48 317 316 97 30 chr2 202198643 202198880 -51057703 + L2 LINE L2 3012 3264 -49 598 325 31 43 chr2 202199985 202200240 -51056343 + MLT1I LTR MaLR 130 381 -28 1703 158 95 14 chr2 202200249 202200596 -51055987 - THE1C LTR MaLR 0 375 1 316 110 14 27 chr2 202202526 202202599 -51053984 + (TAGA)n Simple_repeat Simple_repeat 2 73 0 225 153 85 17 chr2 202202812 202202871 -51053712 - LTR41 LTR ERVL -708 65 3 21 57 0 0 chr2 202202899 202202934 -51053649 + AT_rich Low_complexity Low_complexity 1 35 0 1999 121 0 0 chr2 202203296 202203610 -51052973 - AluSq SINE Alu 0 314 1 468 312 70 49 chr2 202204424 202204740 -51051843 - MLT1J1 LTR MaLR -118 332 17 618 312 87 9 chr2 202205012 202205230 -51051353 - MIR SINE MIR -21 241 7 188 67 33 0 chr2 202205247 202205277 -51051306 + (TTTC)n Simple_repeat Simple_repeat 3 33 0 54 16 0 0 chr2 202206155 202206216 -51050367 + AT_rich Low_complexity Low_complexity 1 61 0 3472 166 11 8 chr2 202256243 202256865 -50999718 - L1P LINE L1 -1777 4369 3746 237 193 11 34 chr2 202258301 202258389 -50998194 + (CATA)n Simple_repeat Simple_repeat 3 88 0 756 297 110 24 chr2 202258978 202259468 -50997115 + MLT1L LTR MaLR 10 551 -64 274 345 18 9 chr2 202260955 202261068 -50995515 - L2 LINE L2 -4 3309 3196 722 186 81 86 chr2 202261075 202261285 -50995298 + MER3 DNA MER1_type 1 209 0 281 362 88 25 chr2 202261293 202261611 -50994972 - L2 LINE L2 -122 3191 2854 496 278 87 23 chr2 202263884 202264183 -50992400 - L1M4 LINE L1 -3513 2633 2316 2629 216 10 22 chr2 202264184 202264780 -50991803 - L1MD3 LINE L1 -2 7993 7405 263 248 10 119 chr2 202264782 202264883 -50991700 - MLT1F1 LTR MaLR -443 124 35 386 264 54 0 chr2 202264883 202265031 -50991552 - L1MD3 LINE L1 -879 7116 6961 * 1284 232 119 40 chr2 202265020 202265614 -50990969 - L1MEc LINE L1 -3045 3170 2530 459 214 167 33 chr2 202265622 202265832 -50990751 - L1MEc LINE L1 -4308 2088 1851 1912 303 47 38 chr2 202265848 202267051 -50989532 - L1MEc LINE L1 -5150 1246 34 1523 214 17 0 chr2 202267571 202267866 -50988717 + AluJo SINE Alu 1 300 -12 24 103 0 0 chr2 202267950 202268037 -50988546 + AT_rich Low_complexity Low_complexity 1 87 0 256 315 56 28 chr2 202270535 202270678 -50985905 - MLT1J LTR MaLR -54 457 311 1393 185 76 10 chr2 202270702 202271004 -50985579 - L1MB1 LINE L1 -1 6167 5846 9055 204 40 31 chr2 202271163 202274256 -50982327 - L1MB1 LINE L1 -176 5992 2875 207 370 14 0 chr2 202275034 202275107 -50981476 + MIR SINE MIR 11 84 -178 1104 278 99 28 chr2 202275250 202275685 -50980898 + MER54A LTR ERVL 14 479 -422 588 358 45 36 chr2 202276885 202277466 -50979117 - LTR52-int LTR ERVL -496 3060 2475 849 353 23 3 chr2 202277970 202278318 -50978265 - LTR52-int LTR ERVL -1650 1906 1552 30 27 0 0 chr2 202281254 202281291 -50975292 + AT_rich Low_complexity Low_complexity 1 37 0 292 271 0 0 chr2 202281928 202281998 -50974585 - MLT1J LTR MaLR 0 511 442 197 204 0 37 chr2 202282344 202282398 -50974185 + L2 LINE L2 3262 3313 0 886 171 40 0 chr2 202282553 202282728 -50973855 + L1MA7 LINE L1 6110 6291 0 647 331 52 15 chr2 202282974 202283303 -50973280 + LTR33 LTR ERVL 169 509 -12 5633 218 113 76 chr2 202284187 202285878 -50970705 + MER52A LTR ERV1 2 1755 0 305 266 40 119 chr2 202286539 202286716 -50969867 - MER5A DNA MER1_type -23 166 4 655 327 130 37 chr2 202287525 202287946 -50968637 - L2 LINE L2 -4 3309 2797 348 24 0 0 chr2 202287946 202287987 -50968596 + (TG)n Simple_repeat Simple_repeat 1 41 0 655 327 130 37 chr2 202287987 202288252 -50968331 - L2 LINE L2 -516 2797 2558 246 217 72 0 chr2 202289178 202289261 -50967322 + L1MC4 LINE L1 6614 6702 -1340 228 238 16 0 chr2 202291238 202291301 -50965282 + GA-rich Low_complexity Low_complexity 2 65 0 38 52 0 13 chr2 202291329 202291374 -50965209 + AT_rich Low_complexity Low_complexity 1 46 -30 1541 97 156 37 chr2 202291374 202291643 -50964940 + AluY SINE Alu 1 301 0 38 52 0 13 chr2 202291643 202291674 -50964909 + AT_rich Low_complexity Low_complexity 46 76 0 621 231 75 0 chr2 202291751 202291898 -50964685 - MER3 DNA MER1_type 0 209 52 382 283 107 28 chr2 202292523 202292700 -50963883 - MIR SINE MIR -70 192 2 213 178 0 0 chr2 202292740 202292785 -50963798 + (TG)n Simple_repeat Simple_repeat 2 46 0 256 164 30 0 chr2 202292844 202292911 -50963672 + (CA)n Simple_repeat Simple_repeat 2 70 0 21 0 0 0 chr2 202292937 202292958 -50963625 + AT_rich Low_complexity Low_complexity 1 21 0 1714 182 83 40 chr2 202293840 202294372 -50962211 + MLT2A2 LTR ERVL 1 554 0 2516 57 0 0 chr2 202295193 202295490 -50961093 + AluY SINE Alu 1 297 -14 229 339 208 15 chr2 202295899 202296029 -50960554 + MIR SINE MIR 81 235 -27 709 247 0 0 chr2 202296868 202297018 -50959565 + FAM SINE Alu 23 172 -13 571 326 5 15 chr2 202297957 202298153 -50958430 - MER63A DNA MER1_type -7 203 10 228 214 0 0 chr2 202301006 202301048 -50955535 + 5S rRNA rRNA 1 42 -79 712 232 36 36 chr2 202301537 202301731 -50954852 + MIR SINE MIR 11 204 -58 305 293 87 34 chr2 202303838 202304046 -50952537 + MLT1I LTR MaLR 3 221 -188 336 266 70 31 chr2 202304355 202304483 -50952100 + MIR SINE MIR 28 160 -102 220 277 30 20 chr2 202304538 202304639 -50951944 + (TATATG)n Simple_repeat Simple_repeat 1 102 0 244 303 59 53 chr2 202304675 202304827 -50951756 + MIR SINE MIR 109 261 -1 22 0 0 0 chr2 202305713 202305735 -50950848 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 202306549 202306570 -50950013 + AT_rich Low_complexity Low_complexity 1 21 0 344 59 20 0 chr2 202306621 202306672 -50949911 + (TG)n Simple_repeat Simple_repeat 2 53 0 232 419 33 0 chr2 202306761 202306945 -50949638 + MIR SINE MIR 40 229 -33 29 47 0 0 chr2 202307252 202307295 -50949288 + AT_rich Low_complexity Low_complexity 1 43 0 2919 95 9 3 chr2 202307408 202307820 -50948763 + MLT2A1 LTR ERVL 1 480 -40 202 297 31 0 chr2 202307824 202307888 -50948695 + (TA)n Simple_repeat Simple_repeat 1 66 0 609 250 39 0 chr2 202308546 202308726 -50947857 - L1MA9 LINE L1 -43 6269 6083 1556 142 35 24 chr2 202308742 202309030 -50947553 - L1MA9 LINE L1 -365 5947 5657 1242 206 34 3 chr2 202309208 202309500 -50947083 - L1MA8 LINE L1 -7 6284 5984 975 168 0 0 chr2 202309504 202309665 -50946918 + L1MA8 LINE L1 5825 5985 -315 927 274 77 51 chr2 202310168 202310599 -50945984 + MLT1D LTR MaLR 6 447 -58 266 250 15 0 chr2 202310635 202310703 -50945880 + MLT1D LTR MaLR 558 626 0 11135 168 79 3 chr2 202310721 202312717 -50943866 + L1MA3 LINE L1 401 2548 -5017 10076 184 24 38 chr2 202312719 202315807 -50940776 + L1MA3 LINE L1 4673 7717 -7 1644 141 41 0 chr2 202315825 202316115 -50940468 + L1M1 LINE L1 5478 5779 -524 993 268 59 75 chr2 202316181 202316794 -50939789 + L1MEc LINE L1 1004 1725 -4838 2889 161 9 30 chr2 202316794 202317367 -50939216 + L1MA5 LINE L1 5740 6300 0 993 268 59 75 chr2 202317367 202317395 -50939188 + L1MEc LINE L1 1725 1752 -4811 25 65 0 0 chr2 202317534 202317580 -50939003 + AT_rich Low_complexity Low_complexity 1 46 0 373 179 0 0 chr2 202317620 202317687 -50938896 + L1 LINE L1 5209 5275 -871 183 129 0 0 chr2 202317745 202317776 -50938807 + (TC)n Simple_repeat Simple_repeat 1 31 0 33 25 0 0 chr2 202317783 202317823 -50938760 + AT_rich Low_complexity Low_complexity 1 40 0 1643 196 45 11 chr2 202317856 202318209 -50938374 - MLT2D LTR ERVL -47 367 3 21 36 0 0 chr2 202318286 202318314 -50938269 + AT_rich Low_complexity Low_complexity 1 28 0 1044 277 123 28 chr2 202318314 202318812 -50937771 + MLT1H LTR MaLR 3 547 -2 291 122 0 0 chr2 202319400 202319449 -50937134 + (TG)n Simple_repeat Simple_repeat 2 50 0 6093 55 15 19 chr2 202319854 202320830 -50935753 - L1PA7 LINE L1 -107 6047 5071 302 303 48 67 chr2 202320841 202321049 -50935534 - MIR SINE MIR -26 236 33 390 85 0 0 chr2 202321096 202321155 -50935428 + (TC)n Simple_repeat Simple_repeat 2 60 0 276 30 0 0 chr2 202321211 202321244 -50935339 + (TG)n Simple_repeat Simple_repeat 2 34 0 231 36 0 0 chr2 202321513 202321541 -50935042 + (TGAA)n Simple_repeat Simple_repeat 2 29 0 201 39 0 0 chr2 202322283 202322309 -50934274 + (CAAAAA)n Simple_repeat Simple_repeat 3 28 0 31 82 0 0 chr2 202322368 202322441 -50934142 + AT_rich Low_complexity Low_complexity 1 73 0 797 166 25 0 chr2 202322502 202322659 -50933924 - L1MB1 LINE L1 -1 6167 6007 23 0 0 0 chr2 202323440 202323463 -50933120 + AT_rich Low_complexity Low_complexity 1 23 0 334 333 9 0 chr2 202323492 202323606 -50932977 - L2 LINE L2 -15 3298 3184 4798 139 8 5 chr2 202323925 202324687 -50931896 + L1PA16 LINE L1 5400 6163 -3 3866 107 8 41 chr2 202324714 202325343 -50931240 - LTR14B LTR ERVK 0 608 1 741 221 131 45 chr2 202325610 202325854 -50930729 - L1MC4a LINE L1 -931 6877 6613 23 0 0 0 chr2 202325927 202325950 -50930633 + AT_rich Low_complexity Low_complexity 1 23 0 1491 229 195 8 chr2 202326133 202326610 -50929973 + Tigger6a DNA MER2_type 10 575 -508 568 273 43 90 chr2 202326634 202327180 -50929403 - L1MEc LINE L1 -3531 2684 2114 225 0 0 0 chr2 202327180 202327205 -50929378 + (TA)n Simple_repeat Simple_repeat 2 26 0 2273 82 0 0 chr2 202327209 202327513 -50929070 - AluY SINE Alu 0 305 2 568 273 43 90 chr2 202327513 202328081 -50928502 - L1MEc LINE L1 -4104 2111 1538 325 355 77 47 chr2 202328143 202328807 -50927776 - L1MEc LINE L1 -5628 768 85 23 68 0 0 chr2 202329121 202329165 -50927418 + AT_rich Low_complexity Low_complexity 1 44 0 31 26 0 0 chr2 202329254 202329292 -50927291 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr2 202329395 202329416 -50927167 + AT_rich Low_complexity Low_complexity 1 21 0 1454 261 28 60 chr2 202332068 202332604 -50923979 - MLT1F LTR MaLR 0 542 24 3578 148 30 17 chr2 202332620 202333261 -50923322 - L1PB4 LINE L1 -12 6144 5496 1397 241 31 15 chr2 202334003 202334634 -50921949 - L1P5 LINE L1 -564 5592 4952 22 0 0 0 chr2 202335421 202335443 -50921140 + AT_rich Low_complexity Low_complexity 1 22 0 422 137 27 0 chr2 202335996 202336069 -50920514 + MADE1 DNA Mariner 1 75 -5 2826 120 14 9 chr2 202337831 202338263 -50918320 - MER57B LTR ERV1 0 434 1 1487 102 119 4 chr2 202338263 202338489 -50918094 - MER57B-int LTR ERV1 0 7537 7286 531 172 11 0 chr2 202338498 202338591 -50917992 - LTR54B LTR ERV1 -400 98 5 19370 124 45 35 chr2 202338593 202342610 -50913973 - MER57B-int LTR ERV1 -390 7147 2190 677 126 0 0 chr2 202342592 202342695 -50913888 - MER57B-int LTR ERV1 -4958 2579 2477 * 3541 170 32 15 chr2 202342696 202343481 -50913102 - MER57B-int LTR ERV1 -4231 3585 648 * 4426 147 33 1 chr2 202343473 202344176 -50912407 - MER57B-int LTR ERV1 -6808 729 5 1094 150 57 0 chr2 202344184 202344377 -50912206 - MER57B LTR ERV1 -2 432 229 1285 190 91 195 chr2 202344390 202345338 -50911245 + LTR1B LTR ERV1 12 1020 0 1528 141 0 17 chr2 202345340 202345574 -50911009 - MER57B LTR ERV1 -204 230 1 21 0 0 0 chr2 202346413 202346434 -50910149 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 202346592 202346615 -50909968 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr2 202347442 202347472 -50909111 + AT_rich Low_complexity Low_complexity 1 30 0 38 61 0 0 chr2 202347722 202347788 -50908795 + AT_rich Low_complexity Low_complexity 1 66 0 26776 32 5 2 chr2 202349337 202353359 -50903224 + L1PA3 LINE L1 2125 6155 0 243 259 0 0 chr2 202353581 202353666 -50902917 + (TA)n Simple_repeat Simple_repeat 2 86 0 1895 195 31 17 chr2 202354061 202354415 -50902168 + MLT2B1 LTR ERVL 76 434 -86 219 234 16 31 chr2 202354584 202354648 -50901935 + (CATA)n Simple_repeat Simple_repeat 2 64 0 505 0 31 0 chr2 202354944 202355009 -50901574 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 4831 231 72 50 chr2 202355025 202355804 -50900779 + L1MB1 LINE L1 2482 3242 -2904 2332 115 0 0 chr2 202355804 202356116 -50900467 - AluSx SINE Alu 0 312 1 4831 231 72 50 chr2 202356116 202356956 -50899627 + L1MB1 LINE L1 3242 4152 -1994 1608 171 11 21 chr2 202356956 202357281 -50899302 - AluJb SINE Alu 0 322 1 4831 231 72 50 chr2 202357281 202357548 -50899035 + L1MB1 LINE L1 4152 4412 -1734 1763 173 26 22 chr2 202357544 202358112 -50898471 - L1M2 LINE L1 -744 5402 4977 * 1057 181 122 0 chr2 202358105 202358342 -50898241 + L1MB1 LINE L1 5528 5793 -375 * 839 190 43 22 chr2 202358348 202358532 -50898051 + L1MB1 LINE L1 5980 6167 -1 21 57 0 0 chr2 202359770 202359805 -50896778 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr2 202360894 202360923 -50895660 + AT_rich Low_complexity Low_complexity 1 29 0 4576 27 4 5 chr2 202360985 202361536 -50895047 - L1PA4 LINE L1 -2 6153 5604 779 326 199 12 chr2 202361753 202362265 -50894318 + L2 LINE L2 2209 2816 -498 1125 161 50 0 chr2 202362268 202362467 -50894116 - L1PA12 LINE L1 -143 6025 5817 6445 66 11 0 chr2 202362468 202363993 -50892590 - L1PA7 LINE L1 0 6154 4613 9458 109 8 11 chr2 202363993 202365455 -50891128 + L1P LINE L1 1988 3444 -2702 439 311 0 22 chr2 202365758 202365893 -50890690 + MIR SINE MIR 125 256 -6 277 350 32 0 chr2 202366733 202366856 -50889727 - MIR3 SINE MIR -9 199 73 2292 110 0 0 chr2 202366988 202367298 -50889285 - AluSx SINE Alu -2 310 1 302 250 60 0 chr2 202367740 202367840 -50888743 - MIR SINE MIR -71 191 86 214 163 50 25 chr2 202368182 202368262 -50888321 + (TAGA)n Simple_repeat Simple_repeat 4 85 0 26 0 0 0 chr2 202368652 202368678 -50887905 + AT_rich Low_complexity Low_complexity 1 26 0 251 325 74 31 chr2 202370387 202370550 -50886033 + MER5B DNA MER1_type 1 170 -8 223 284 119 18 chr2 202370592 202370701 -50885882 + MIR SINE MIR 53 172 -90 185 32 0 65 chr2 202372399 202372430 -50884153 + (TAAAAA)n Simple_repeat Simple_repeat 1 29 0 204 243 0 0 chr2 202372731 202372768 -50883815 + MIR SINE MIR 218 254 -8 23 0 0 0 chr2 202375262 202375285 -50881298 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 202375437 202375459 -50881124 + AT_rich Low_complexity Low_complexity 1 22 0 358 226 20 10 chr2 202375549 202375651 -50880932 + MER46C DNA MER2_type 81 183 -155 1497 254 85 39 chr2 202375773 202376407 -50880176 + L1MC4 LINE L1 6982 7644 -398 470 250 0 9 chr2 202377145 202377253 -50879330 - L1MD2 LINE L1 -57 6302 6196 287 280 184 29 chr2 202377481 202377539 -50879044 - L2 LINE L2 -55 3258 3210 324 70 0 0 chr2 202377539 202377582 -50879001 + (TG)n Simple_repeat Simple_repeat 1 43 0 287 280 184 29 chr2 202377582 202377762 -50878821 - L2 LINE L2 -103 3210 2983 270 0 0 0 chr2 202377768 202377798 -50878785 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 600 179 24 62 chr2 202377846 202377991 -50878592 + MSTD LTR MaLR 227 346 -50 1471 302 61 41 chr2 202378003 202378658 -50877925 - L2 LINE L2 -342 2972 2305 199 371 31 41 chr2 202379001 202379195 -50877388 + L2 LINE L2 2609 2800 -514 26 0 0 0 chr2 202379523 202379549 -50877034 + AT_rich Low_complexity Low_complexity 1 26 0 1883 231 81 24 chr2 202380636 202381177 -50875406 - MER90 LTR ERV1 0 614 1 5167 23 0 3 chr2 202381777 202382386 -50874197 + L1PA4 LINE L1 5549 6155 0 23 33 0 0 chr2 202382758 202382788 -50873795 + AT_rich Low_complexity Low_complexity 1 30 0 24 32 0 0 chr2 202382942 202382973 -50873610 + AT_rich Low_complexity Low_complexity 1 31 0 1789 158 92 6 chr2 202382998 202383315 -50873268 + MER7A DNA MER2_type 4 345 -1 24 53 0 0 chr2 202384243 202384281 -50872302 + AT_rich Low_complexity Low_complexity 1 38 0 226 255 0 0 chr2 202385336 202385387 -50871196 + MER94 DNA DNA 72 122 -12 1311 222 115 11 chr2 202385864 202386220 -50870363 - MSTD LTR MaLR 0 396 4 5756 237 95 30 chr2 202386229 202387852 -50868731 - MSTD-int LTR MaLR -7 1728 1 1510 254 20 5 chr2 202387853 202388243 -50868340 - MSTD LTR MaLR 0 396 1 297 192 27 27 chr2 202388286 202388359 -50868224 + Tigger5 DNA MER2_type 2250 2322 -1 429 283 0 0 chr2 202388366 202388465 -50868118 - Tigger5 DNA MER2_type -2224 99 1 444 154 115 0 chr2 202388476 202388554 -50868029 + Tigger5 DNA MER2_type 2237 2323 0 1314 241 60 36 chr2 202389724 202390139 -50866444 - MLT1C LTR MaLR -3 464 40 2214 70 11 3 chr2 202390259 202390544 -50866039 - AluY SINE Alu -14 297 11 2741 116 5 14 chr2 202390825 202391247 -50865336 + L1PA14 LINE L1 5744 6161 0 627 218 63 6 chr2 202391270 202391444 -50865139 + L1MC4 LINE L1 6704 6887 -1155 312 235 80 53 chr2 202391546 202391733 -50864850 + L1MC4 LINE L1 6882 7073 -969 225 163 0 0 chr2 202391788 202391837 -50864746 + (TG)n Simple_repeat Simple_repeat 2 50 0 1246 219 219 36 chr2 202391837 202392052 -50864531 + L1MC4 LINE L1 7102 7276 -766 2216 76 10 17 chr2 202392052 202392353 -50864230 + AluY SINE Alu 1 299 -12 1246 219 219 36 chr2 202392353 202392689 -50863894 + L1MC4 LINE L1 7276 7754 -288 258 249 19 19 chr2 202392756 202392848 -50863735 + GA-rich Low_complexity Low_complexity 1 156 0 2866 163 37 66 chr2 202394902 202395600 -50860983 - L1MA9 LINE L1 -42 6270 5593 2244 142 0 0 chr2 202395611 202395971 -50860612 - L1PB1 LINE L1 -8 6143 5784 216 133 0 44 chr2 202395977 202396022 -50860561 + (TATATG)n Simple_repeat Simple_repeat 6 48 0 3324 106 15 19 chr2 202396028 202396556 -50860027 - L1PB1 LINE L1 -360 5791 5266 1581 177 6 9 chr2 202396557 202396846 -50859737 - L1MA9 LINE L1 -706 5606 5317 261 0 0 0 chr2 202396846 202396875 -50859708 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1581 177 6 9 chr2 202396875 202396901 -50859682 - L1MA9 LINE L1 -995 5317 5292 * 4130 199 49 8 chr2 202396900 202397878 -50858705 + L1MA9 LINE L1 4290 5307 -839 200 307 13 0 chr2 202398021 202398096 -50858487 + (TAAA)n Simple_repeat Simple_repeat 1 76 0 398 340 30 39 chr2 202398118 202398321 -50858262 + MIR SINE MIR 13 213 -49 817 244 0 0 chr2 202398331 202398499 -50858084 - MLT1B LTR MaLR 0 390 223 6525 67 28 7 chr2 202398501 202399174 -50857409 - L1PA7 LINE L1 0 6154 5497 1972 128 3 24 chr2 202399174 202399472 -50857111 - AluSg SINE Alu -18 292 1 6525 67 28 7 chr2 202399472 202400327 -50856256 - L1PA7 LINE L1 -657 5497 4613 8434 112 14 3 chr2 202400327 202401636 -50854947 + L1P LINE L1 1988 3310 -2836 851 218 52 44 chr2 202401636 202401865 -50854718 - MLT1B LTR MaLR -159 231 1 23 54 0 0 chr2 202403719 202403756 -50852827 + AT_rich Low_complexity Low_complexity 1 37 0 23 33 0 0 chr2 202404167 202404197 -50852386 + AT_rich Low_complexity Low_complexity 1 30 0 1457 235 0 3 chr2 202404398 202404704 -50851879 - AluJb SINE Alu -7 305 1 781 223 58 0 chr2 202404814 202405020 -50851563 - L1MEc LINE L1 -3587 2628 2411 20196 30 1 0 chr2 202405028 202408253 -50848330 + L1PA3 LINE L1 2935 6172 0 842 308 108 8 chr2 202408275 202408626 -50847957 - L1MEc LINE L1 -5890 506 121 2428 81 0 0 chr2 202408915 202409224 -50847359 + AluSc SINE Alu 1 309 0 234 205 51 0 chr2 202609862 202609940 -50646643 + (TA)n Simple_repeat Simple_repeat 1 82 0 370 51 0 63 chr2 202610611 202610690 -50645893 + (TA)n Simple_repeat Simple_repeat 2 75 0 1133 114 23 6 chr2 202610706 202610882 -50645701 - L1P5 LINE L1 -359 5792 5614 * 4482 216 7 9 chr2 202610880 202611918 -50644665 - L1 LINE L1 -982 5164 4129 4065 202 6 12 chr2 202611915 202612795 -50643788 + L1 LINE L1 3249 4122 -2024 * 1649 262 113 21 chr2 202613315 202614119 -50642464 - L1MEc LINE L1 -1738 4342 3465 937 284 53 4 chr2 202614135 202614590 -50641993 - L1MEc LINE L1 -2708 3372 2896 807 293 113 47 chr2 202614608 202614800 -50641783 - L1MEc LINE L1 -3404 2676 2498 2182 127 0 0 chr2 202614800 202615099 -50641484 + AluSx SINE Alu 1 299 -13 807 293 113 47 chr2 202615099 202616010 -50640573 - L1MEc LINE L1 -3582 2498 1480 570 193 21 35 chr2 202616033 202616178 -50640405 - L1MA8 LINE L1 -22 6269 6127 * 690 240 147 34 chr2 202616165 202616519 -50640064 - L1MEc LINE L1 -4630 1450 1057 562 277 95 22 chr2 202616536 202616767 -50639816 - L1MEc LINE L1 -5472 598 351 382 288 52 20 chr2 202616864 202617017 -50639566 - L1MEc LINE L1 -5878 192 35 285 279 145 23 chr2 202618328 202618500 -50638083 + L1MC/D LINE L1 5625 5817 -1991 282 29 0 0 chr2 202618508 202618543 -50638040 + (TA)n Simple_repeat Simple_repeat 1 35 0 334 179 14 69 chr2 202618579 202618724 -50637859 + (TA)n Simple_repeat Simple_repeat 1 137 0 241 175 16 32 chr2 202620400 202620463 -50636120 + (TA)n Simple_repeat Simple_repeat 2 63 0 * 264 201 59 41 chr2 202620446 202620615 -50635968 + (TTATA)n Simple_repeat Simple_repeat 3 174 0 232 275 22 33 chr2 202620620 202620677 -50635906 + MER110 LTR ERV1 1 58 -433 1909 83 0 0 chr2 202620677 202620930 -50635653 + AluY SINE Alu 51 303 -8 919 271 37 3 chr2 202620930 202621225 -50635358 + MER110 LTR ERV1 17 321 -170 11140 38 8 0 chr2 202621225 202622631 -50633952 - L1P2 LINE L1 -2435 3711 2294 * 14142 29 2 3 chr2 202622628 202624626 -50631957 + L1P2 LINE L1 3690 5682 -472 709 256 46 14 chr2 202624969 202625254 -50631329 + L1M4 LINE L1 4448 4741 -1405 834 256 252 6 chr2 202625254 202625516 -50631067 + L1M4 LINE L1 4542 4738 -1408 2075 68 62 0 chr2 202625516 202625627 -50630956 + AluY SINE Alu 1 104 -207 225 0 0 0 chr2 202625627 202625652 -50630931 + (CA)n Simple_repeat Simple_repeat 2 26 0 2075 68 62 0 chr2 202625652 202625832 -50630751 + AluY SINE Alu 104 310 -1 834 256 252 6 chr2 202625832 202626081 -50630502 + L1M4 LINE L1 4738 5179 -967 232 227 117 47 chr2 202626092 202626220 -50630363 + HAL1 LINE L1 1262 1398 -1109 1653 116 0 17 chr2 202627110 202627343 -50629240 - AluSg1 SINE Alu -30 279 51 34 55 0 0 chr2 202627727 202627782 -50628801 + AT_rich Low_complexity Low_complexity 1 55 0 294 345 95 36 chr2 202627890 202628058 -50628525 - L2 LINE L2 -41 3231 3054 266 325 184 24 chr2 202628688 202628900 -50627683 + MIR SINE MIR 8 253 -9 924 272 30 49 chr2 202631744 202632049 -50624534 + LTR16A LTR ERVL 99 397 -53 216 0 0 0 chr2 202632441 202632465 -50624118 + (A)n Simple_repeat Simple_repeat 1 24 0 23 33 0 0 chr2 202633130 202633160 -50623423 + AT_rich Low_complexity Low_complexity 1 30 0 326 298 50 64 chr2 202633850 202634068 -50622515 - L2 LINE L2 -4 3309 3095 387 208 131 109 chr2 202634139 202634346 -50622237 - MLT1H LTR MaLR -10 541 331 736 214 14 0 chr2 202634452 202634597 -50621986 + AluJb SINE Alu 165 311 -1 586 308 27 31 chr2 202634598 202634822 -50621761 - MLT1H LTR MaLR -309 240 18 21 36 0 0 chr2 202635161 202635189 -50621394 + AT_rich Low_complexity Low_complexity 1 28 0 287 314 67 0 chr2 202635250 202635355 -50621228 - L2 LINE L2 -196 3076 2965 24 0 0 0 chr2 202636138 202636162 -50620421 + AT_rich Low_complexity Low_complexity 1 24 0 231 282 12 12 chr2 202636716 202636801 -50619782 - L2 LINE L2 -1084 2230 2146 446 296 142 0 chr2 202636837 202637013 -50619570 - MIR SINE MIR -24 238 38 24 32 0 0 chr2 202638206 202638237 -50618346 + AT_rich Low_complexity Low_complexity 1 31 0 21 57 0 0 chr2 202639071 202639106 -50617477 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr2 202640076 202640098 -50616485 + AT_rich Low_complexity Low_complexity 1 22 0 763 47 71 12 chr2 202640098 202640267 -50616316 + (TA)n Simple_repeat Simple_repeat 2 180 0 462 101 0 0 chr2 202640451 202640520 -50616063 + (CA)n Simple_repeat Simple_repeat 2 70 0 464 353 59 57 chr2 202642357 202642799 -50613784 + L2 LINE L2 2867 3309 -4 697 87 0 0 chr2 202643577 202643680 -50612903 - L1PA13 LINE L1 0 6163 6061 2043 116 8 1 chr2 202643683 202644022 -50612561 - L1PA12 LINE L1 -303 5851 5497 37 0 0 0 chr2 202644129 202644166 -50612417 + AT_rich Low_complexity Low_complexity 1 37 0 312 91 0 0 chr2 202644644 202644688 -50611895 + (TA)n Simple_repeat Simple_repeat 2 45 0 1310 239 61 41 chr2 202646694 202647134 -50609449 - MLT1D LTR MaLR 0 505 57 441 209 93 112 chr2 202647144 202647359 -50609224 - MLT1D LTR MaLR -294 211 1 1569 262 33 84 chr2 202647365 202648126 -50608457 - MLT1D-int LTR MaLR -5 1730 653 1508 187 44 9 chr2 202648135 202648450 -50608133 - MER68 LTR ERV1 -236 326 1 1295 263 74 57 chr2 202648555 202649153 -50607430 + MER76 LTR ERV 27 634 -54 2082 282 20 11 chr2 202649178 202649824 -50606759 - MLT1D-int LTR MaLR -719 652 1 1285 227 106 84 chr2 202649824 202650237 -50606346 - MLT1D LTR MaLR 0 505 88 23 68 0 0 chr2 202650660 202650704 -50605879 + AT_rich Low_complexity Low_complexity 1 44 0 1285 198 12 20 chr2 202652807 202653087 -50603496 + AluJb SINE Alu 34 311 0 24 32 0 0 chr2 202653095 202653126 -50603457 + AT_rich Low_complexity Low_complexity 1 31 0 2179 117 56 17 chr2 202653304 202653662 -50602921 + THE1C LTR MaLR 4 375 0 258 280 63 26 chr2 202654568 202654757 -50601826 + HAL1 LINE L1 1449 1644 -863 1952 187 35 16 chr2 202654998 202655421 -50601162 - Tigger2a DNA MER2_type -3 431 1 29 0 0 0 chr2 202656002 202656031 -50600552 + AT_rich Low_complexity Low_complexity 1 29 0 4798 42 0 5 chr2 202656080 202656705 -50599878 - L1P LINE L1 -2659 3487 2866 2470 51 6 0 chr2 202656808 202657121 -50599462 - L1PA4 LINE L1 -3 6152 5838 216 0 0 0 chr2 202657796 202657820 -50598763 + (A)n Simple_repeat Simple_repeat 1 24 0 245 330 0 0 chr2 202658177 202658283 -50598300 + L1MC4 LINE L1 6353 6458 -1584 4076 207 51 20 chr2 202658294 202659714 -50596869 - L1MA5 LINE L1 -15 6987 5518 562 277 0 0 chr2 202659703 202659851 -50596732 - L1MA5 LINE L1 -3418 3430 3283 * 11642 99 4 13 chr2 202659850 202662402 -50594181 - L1PA7 LINE L1 -1 6153 3624 7483 125 11 0 chr2 202662398 202663580 -50593003 + L1P LINE L1 2391 3585 -2561 * 4223 188 31 18 chr2 202663577 202664843 -50591740 - L1MA5 LINE L1 -3547 3301 2021 * 3682 220 98 7 chr2 202664848 202665702 -50590881 - L1MA5 LINE L1 -5915 934 3 418 247 17 75 chr2 202665701 202665761 -50590822 + L1MC4 LINE L1 6443 6505 -1537 * 2008 113 0 33 chr2 202665761 202666063 -50590520 + AluSg SINE Alu 1 292 -18 418 247 17 75 chr2 202666063 202666176 -50590407 + L1MC4 LINE L1 6505 6606 -1436 938 168 59 5 chr2 202666176 202666379 -50590204 + L1PA16 LINE L1 5947 6160 -6 1832 230 76 63 chr2 202666385 202667208 -50589375 + L1MC4 LINE L1 6150 8042 0 559 340 10 10 chr2 202667836 202668033 -50588550 + MIR SINE MIR 7 203 -59 34 0 0 0 chr2 202669257 202669291 -50587292 + AT_rich Low_complexity Low_complexity 1 34 0 1227 136 45 29 chr2 202669599 202669614 -50586969 - L1MA9 LINE L1 -48 6264 6251 3910 34 4 2 chr2 202669614 202670088 -50586495 - L1PA4 LINE L1 -4 6151 5677 1227 136 45 29 chr2 202670088 202670314 -50586269 - L1MA9 LINE L1 -61 6251 6019 1794 169 0 22 chr2 202672650 202672969 -50583614 + AluJo SINE Alu 1 312 0 387 60 0 0 chr2 202674739 202674789 -50581794 + (TG)n Simple_repeat Simple_repeat 2 51 0 214 230 69 0 chr2 202674852 202674939 -50581644 + (TCTA)n Simple_repeat Simple_repeat 2 94 0 2648 153 62 13 chr2 202674950 202675414 -50581169 + MER1A DNA MER1_type 19 505 -24 252 0 0 0 chr2 202675435 202675463 -50581120 + (TAGA)n Simple_repeat Simple_repeat 1 28 0 200 205 0 0 chr2 202676063 202676102 -50580481 + A-rich Low_complexity Low_complexity 4 42 0 440 360 55 32 chr2 202676318 202676571 -50580012 - MIR SINE MIR -3 259 1 213 65 0 0 chr2 202677330 202677361 -50579222 + (GA)n Simple_repeat Simple_repeat 1 31 0 23 0 0 0 chr2 202678361 202678384 -50578199 + AT_rich Low_complexity Low_complexity 1 23 0 323 252 17 17 chr2 202680097 202680216 -50576367 + L1 LINE L1 4311 4429 -1717 * 4111 93 17 0 chr2 202680203 202681096 -50575487 - L1P3 LINE L1 -483 5671 4769 3845 73 9 4 chr2 202681096 202681616 -50574967 + L1PA8 LINE L1 5632 6165 -7 606 213 69 17 chr2 202681622 202681796 -50574787 + L1 LINE L1 4422 4604 -1542 317 224 62 75 chr2 202683400 202683561 -50573022 + L1MCa LINE L1 1968 2126 -4300 394 291 189 20 chr2 202684125 202684431 -50572152 - L1MC4 LINE L1 -551 7491 7134 802 325 68 6 chr2 202684712 202685023 -50571560 - L1MC4 LINE L1 -1064 6978 6649 185 139 23 0 chr2 202685368 202685411 -50571172 + T-rich Low_complexity Low_complexity 2 45 0 328 338 7 21 chr2 202685784 202685926 -50570657 + MIR SINE MIR 91 230 -32 4811 154 17 6 chr2 202687442 202688268 -50568315 - L1PA16 LINE L1 0 6166 5332 2923 233 1 43 chr2 202688253 202689052 -50567531 + L1PA16 LINE L1 4585 5350 -796 * 1039 148 106 18 chr2 202689087 202689304 -50567279 + MER46A DNA MER2_type 1 236 0 329 286 71 32 chr2 202689304 202689458 -50567125 - L1MEc LINE L1 -4144 2252 2093 1109 194 201 0 chr2 202690549 202690838 -50565745 + MER7A DNA MER2_type 1 345 -1 3836 241 48 12 chr2 202690996 202691977 -50564606 - MER45B DNA AcHobo -23 1017 2 754 307 62 71 chr2 202692196 202692329 -50564254 + HERVL LTR ERVL 2136 2269 -3495 3038 95 11 28 chr2 202692329 202692790 -50563793 + L1PA8 LINE L1 5706 6158 -14 754 307 62 71 chr2 202692790 202693109 -50563474 + HERVL LTR ERVL 2269 2584 -3180 292 306 67 61 chr2 202693280 202693460 -50563123 + HERVL LTR ERVL 4171 4329 -1325 452 185 11 11 chr2 202693548 202693640 -50562943 - L1PA16 LINE L1 -165 6001 5910 232 121 0 0 chr2 202693638 202693671 -50562912 + L1PA15 LINE L1 5928 5960 -205 * 554 123 0 0 chr2 202693689 202693770 -50562813 - L1PA16 LINE L1 -251 5915 5835 763 196 37 6 chr2 202693779 202693942 -50562641 + L1PA16 LINE L1 5997 6164 -2 1575 90 22 5 chr2 202694071 202694293 -50562290 - AluSp SINE Alu -4 309 84 514 353 65 35 chr2 202694570 202694902 -50561681 + HERVL LTR ERVL 4895 5244 -520 2115 65 6 89 chr2 202694902 202695227 -50561356 + AluY SINE Alu 1 298 -13 514 353 65 35 chr2 202695227 202695322 -50561261 + HERVL LTR ERVL 5244 5335 -429 2218 124 26 3 chr2 202695565 202695912 -50560671 + THE1A LTR MaLR 1 355 0 25 0 0 0 chr2 202695921 202695946 -50560637 + AT_rich Low_complexity Low_complexity 1 25 0 1881 166 3 12 chr2 202695946 202696272 -50560311 - Tigger1 DNA MER2_type -2093 325 3 950 290 92 39 chr2 202696272 202696790 -50559793 + L2 LINE L2 2532 3084 -229 2214 133 0 19 chr2 202696839 202697206 -50559377 - L1PB1 LINE L1 -1 6150 5791 322 246 17 74 chr2 202697222 202697397 -50559186 + CT-rich Low_complexity Low_complexity 1 165 0 405 277 88 34 chr2 202697502 202697516 -50559067 + LTR33 LTR ERVL 2 14 -507 6078 98 45 30 chr2 202697516 202698471 -50558112 + LTR5 LTR ERVK 1 969 0 405 277 88 34 chr2 202698471 202698604 -50557979 + LTR33 LTR ERVL 14 157 -364 268 294 20 29 chr2 202698668 202698770 -50557813 + LTR33 LTR ERVL 284 384 -137 392 282 86 0 chr2 202699525 202699642 -50556941 - MER94 DNA DNA 0 134 8 1296 141 93 120 chr2 202700040 202700500 -50556083 - LTR7 LTR ERV1 -2 448 1 21 36 0 0 chr2 202700534 202700562 -50556021 + AT_rich Low_complexity Low_complexity 1 28 0 25 65 0 0 chr2 202700575 202700621 -50555962 + AT_rich Low_complexity Low_complexity 1 46 0 30 77 0 0 chr2 202700823 202700888 -50555695 + AT_rich Low_complexity Low_complexity 1 65 0 1644 187 35 0 chr2 202700888 202701171 -50555412 - AluSx SINE Alu -19 293 1 428 278 91 0 chr2 202701746 202701922 -50554661 - L1MC5 LINE L1 -742 7219 7028 571 226 30 8 chr2 202702409 202702542 -50554041 - AluJb SINE Alu -83 229 94 330 288 117 0 chr2 202702597 202702708 -50553875 + L2 LINE L2 3188 3311 -2 2025 102 10 7 chr2 202703154 202703447 -50553136 + AluSg SINE Alu 1 294 -16 305 375 31 5 chr2 202704081 202704273 -50552310 - MIR SINE MIR 0 262 66 23 33 0 0 chr2 202704551 202704581 -50552002 + AT_rich Low_complexity Low_complexity 1 30 0 41 48 0 0 chr2 202704625 202704687 -50551896 + AT_rich Low_complexity Low_complexity 1 62 0 247 169 46 15 chr2 202705248 202705313 -50551270 + T-rich Low_complexity Low_complexity 2 68 0 439 149 0 0 chr2 202706286 202706360 -50550223 + MADE1 DNA Mariner 4 77 -3 2023 169 85 30 chr2 202706379 202706883 -50549700 + L1MA6 LINE L1 5768 6299 -1 338 276 122 46 chr2 202709316 202709512 -50547071 + MIR SINE MIR 6 216 -46 221 230 30 10 chr2 202709516 202709616 -50546967 + (TATAA)n Simple_repeat Simple_repeat 3 104 0 216 201 52 35 chr2 202709565 202709739 -50546844 + (TA)n Simple_repeat Simple_repeat 2 178 0 * 34 24 0 0 chr2 202709784 202709825 -50546758 + AT_rich Low_complexity Low_complexity 1 41 0 200 310 99 0 chr2 202709916 202709987 -50546596 - MIR SINE MIR -11 251 174 613 67 86 3 chr2 202710037 202710354 -50546229 + (TA)n Simple_repeat Simple_repeat 1 343 0 24 0 0 0 chr2 202710590 202710614 -50545969 + AT_rich Low_complexity Low_complexity 1 24 0 1890 148 65 31 chr2 202710917 202711269 -50545314 - THE1B LTR MaLR 0 364 1 22 0 0 0 chr2 202711647 202711669 -50544914 + AT_rich Low_complexity Low_complexity 1 22 0 1450 165 86 29 chr2 202711877 202712156 -50544427 + AluSx SINE Alu 1 295 -17 741 268 11 11 chr2 202713108 202713287 -50543296 + LTR28 LTR ERV1 1 179 -841 483 234 204 134 chr2 202713323 202714033 -50542550 + MER61D LTR ERV1 335 1755 0 441 84 0 0 chr2 202714997 202715068 -50541515 + (TC)n Simple_repeat Simple_repeat 2 72 0 239 211 53 13 chr2 202715102 202715178 -50541405 + MER116 DNA Mariner 1 79 -1 455 74 0 158 chr2 202715322 202715417 -50541166 + MADE1 DNA Mariner 1 80 0 287 195 58 13 chr2 202715551 202715705 -50540878 + (TA)n Simple_repeat Simple_repeat 1 161 0 272 257 123 49 chr2 202716164 202716325 -50540258 + MLT1H LTR MaLR 394 554 -1 189 74 0 0 chr2 202716348 202716375 -50540208 + (CAG)n Simple_repeat Simple_repeat 3 29 0 212 167 21 0 chr2 202717113 202717161 -50539422 + (CA)n Simple_repeat Simple_repeat 1 49 0 326 380 51 43 chr2 202719811 202720185 -50536398 - L2 LINE L2 -5 3267 2891 21 36 0 0 chr2 202720722 202720750 -50535833 + AT_rich Low_complexity Low_complexity 1 28 0 204 333 15 0 chr2 202720962 202721028 -50535555 + MIR3 SINE MIR 99 165 -43 295 133 0 0 chr2 202721470 202721515 -50535068 + MADE1 DNA Mariner 3 47 -33 205 382 10 10 chr2 202721767 202721869 -50534714 - MIR SINE MIR -130 132 31 306 343 47 35 chr2 202722288 202722457 -50534126 + MIR3 SINE MIR 35 205 -3 350 369 50 0 chr2 202722839 202722980 -50533603 + L2 LINE L2 2850 2997 -316 191 417 19 0 chr2 202723507 202723615 -50532968 - L2 LINE L2 0 3272 3163 23 33 0 0 chr2 202724706 202724736 -50531847 + AT_rich Low_complexity Low_complexity 1 30 0 214 380 0 0 chr2 202724931 202725002 -50531581 + L2 LINE L2 2930 3000 -313 2110 134 3 0 chr2 202725051 202725356 -50531227 + AluSx SINE Alu 1 306 -6 381 297 103 5 chr2 202725464 202725649 -50530934 + L2 LINE L2 3111 3313 0 2482 31 0 3 chr2 202725695 202726008 -50530575 + AluY SINE Alu 1 312 0 402 353 23 0 chr2 202726267 202726400 -50530183 - MIR SINE MIR -122 140 5 548 313 32 57 chr2 202727000 202727316 -50529267 - L2 LINE L2 -91 3222 2915 220 235 39 0 chr2 202727513 202727564 -50529019 + L2 LINE L2 3208 3260 -12 514 149 0 0 chr2 202727666 202727760 -50528823 - AluSg/x SINE Alu -3 306 213 270 331 94 16 chr2 202728503 202728630 -50527953 - L2 LINE L2 -1 3312 3176 1257 177 9 0 chr2 202729312 202729532 -50527051 + MER52-int LTR ERV1 6869 7090 -1 2057 156 16 19 chr2 202729545 202729968 -50526615 - MER61-int LTR ERV1 -3599 1987 1215 400 309 11 34 chr2 202730043 202730218 -50526365 + CT-rich Low_complexity Low_complexity 1 171 0 238 233 55 14 chr2 202730326 202730399 -50526184 - HsTC2 DNA Tc2 -849 1049 974 1245 241 74 72 chr2 202730502 202731047 -50525536 - MLT1E3 LTR MaLR 0 624 45 323 293 42 36 chr2 202731410 202731577 -50525006 - MLT1L LTR MaLR -330 285 118 1911 171 24 21 chr2 202731673 202732048 -50524535 + MLT1B LTR MaLR 9 384 -6 519 327 174 12 chr2 202733046 202733589 -50522994 - L2 LINE L2 0 3313 2682 328 208 28 21 chr2 202734679 202734823 -50521760 + (CAAA)n Simple_repeat Simple_repeat 4 148 0 275 209 37 22 chr2 202734807 202734941 -50521642 + (CCAA)n Simple_repeat Simple_repeat 1 136 0 * 276 60 48 48 chr2 202734943 202735026 -50521557 + (CACAA)n Simple_repeat Simple_repeat 2 84 0 253 243 57 0 chr2 202735142 202735212 -50521371 + MIR SINE MIR 173 246 -16 356 306 106 17 chr2 202736271 202736451 -50520132 - L3b LINE CR1 -96 1487 1292 340 329 81 8 chr2 202736903 202737258 -50519325 - L1MEc LINE L1 -830 1746 1493 212 170 57 44 chr2 202737566 202737725 -50518858 + (CACAA)n Simple_repeat Simple_repeat 4 164 0 6878 42 0 2 chr2 202737881 202738755 -50517828 - L1P LINE L1 -2409 3737 2866 2484 48 6 3 chr2 202738858 202739172 -50517411 - L1PA4 LINE L1 -3 6152 5838 717 231 134 8 chr2 202739502 202739740 -50516843 + LTR37B LTR ERV1 197 464 -4 294 286 59 25 chr2 202739742 202739861 -50516722 - L2 LINE L2 -8 3305 3183 552 229 54 46 chr2 202740567 202740807 -50515776 - L1MC5 LINE L1 -71 7890 7649 292 219 48 29 chr2 202740845 202740950 -50515633 - L1MC5 LINE L1 -405 7556 7450 465 185 0 12 chr2 202740957 202741038 -50515545 - MER81 DNA DNA -5 109 30 579 180 55 8 chr2 202741041 202741169 -50515414 - L1MC5 LINE L1 -514 7447 7314 359 144 14 68 chr2 202741363 202741509 -50515074 + A-rich Low_complexity Low_complexity 3 140 0 22 0 0 0 chr2 202742476 202742498 -50514085 + AT_rich Low_complexity Low_complexity 1 22 0 225 174 38 53 chr2 202743218 202743350 -50513233 + (TTGTG)n Simple_repeat Simple_repeat 5 134 0 185 0 40 0 chr2 202743359 202743384 -50513199 + (TG)n Simple_repeat Simple_repeat 1 26 0 233 172 32 32 chr2 202743441 202743534 -50513049 + (TGG)n Simple_repeat Simple_repeat 3 95 0 4241 205 12 19 chr2 202743618 202744629 -50511954 - L1 LINE L1 -1873 4273 3270 620 270 86 6 chr2 202745013 202745187 -50511396 - LTR40a LTR ERVL -329 190 3 328 270 183 8 chr2 202745189 202745315 -50511268 + MIR SINE MIR 88 235 -27 182 281 53 0 chr2 202745506 202745563 -50511020 - MIR SINE MIR -123 139 80 28 0 0 0 chr2 202747043 202747071 -50509512 + AT_rich Low_complexity Low_complexity 1 28 0 1117 238 118 39 chr2 202748170 202748794 -50507789 - L2 LINE L2 -8 3305 2624 578 146 15 37 chr2 202749001 202749167 -50507416 + L1MB7 LINE L1 5662 5822 -352 * 2738 201 39 18 chr2 202749163 202749962 -50506621 + L1 LINE L1 2426 3241 -2905 288 143 0 0 chr2 202749993 202750049 -50506534 + (G)n Simple_repeat Simple_repeat 1 56 0 1539 137 14 21 chr2 202750164 202750448 -50506135 + L1MB7 LINE L1 5887 6168 -16 604 343 95 15 chr2 202750574 202750985 -50505598 + LTR16B LTR ERVL 5 448 -16 307 165 154 106 chr2 202751329 202751517 -50505066 - MER112 DNA MER1_type 0 260 64 320 233 39 16 chr2 202751940 202752069 -50504514 + C-rich Low_complexity Low_complexity 3 134 0 235 123 25 68 chr2 202752077 202752239 -50504344 + (CCCA)n Simple_repeat Simple_repeat 1 155 0 3638 57 0 0 chr2 202752340 202752794 -50503789 + L1PA6 LINE L1 5700 6153 -1 706 244 12 0 chr2 202752800 202752972 -50503611 + L1 LINE L1 4826 4999 -1147 1409 132 52 8 chr2 202752972 202753220 -50503363 + L1MA5 LINE L1 6030 6291 -9 180 0 0 0 chr2 202753221 202753241 -50503342 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 5213 165 25 12 chr2 202753241 202754495 -50502088 - L1PB1 LINE L1 -10 6141 4867 1329 196 101 23 chr2 202754709 202755056 -50501527 + MLT1B LTR MaLR 1 374 -16 1331 103 134 0 chr2 202755164 202755387 -50501196 + AluSq SINE Alu 60 312 -1 340 371 54 8 chr2 202756918 202757158 -50499425 - MIR SINE MIR 0 262 12 249 283 112 44 chr2 202757990 202758041 -50498542 - L1ME3A LINE L1 -234 5936 5890 237 33 0 0 chr2 202758041 202758071 -50498512 + (TC)n Simple_repeat Simple_repeat 1 30 0 249 283 112 44 chr2 202758071 202758224 -50498359 - L1ME3A LINE L1 -280 5890 5718 76 45 0 0 chr2 202758259 202758370 -50498213 + AT_rich Low_complexity Low_complexity 1 111 0 30656 74 13 6 chr2 202758470 202763290 -50493293 + L1P2 LINE L1 640 5459 -695 1140 176 9 4 chr2 202763490 202763717 -50492866 - L1P LINE L1 -5545 601 374 856 192 14 29 chr2 202763723 202763931 -50492652 - L1PB1 LINE L1 -1862 4284 4080 4825 156 58 16 chr2 202763987 202765300 -50491283 - L1PA16 LINE L1 -9 6157 4785 3336 131 2 29 chr2 202765300 202765857 -50490726 - L1PA15 LINE L1 0 6165 5624 4825 156 58 16 chr2 202765857 202765886 -50490697 - L1PA16 LINE L1 -1381 4785 4759 3306 166 21 12 chr2 202765884 202766547 -50490036 - L1PB1 LINE L1 -2062 4084 3416 * 25 65 0 0 chr2 202766714 202766760 -50489823 + AT_rich Low_complexity Low_complexity 1 46 0 2389 60 0 17 chr2 202768999 202769300 -50487283 + AluY SINE Alu 1 296 -15 38 0 0 0 chr2 202769376 202769414 -50487169 + AT_rich Low_complexity Low_complexity 1 38 0 595 165 0 142 chr2 202769968 202770144 -50486439 + AluSg/x SINE Alu 137 287 -25 378 294 113 35 chr2 202770410 202770641 -50485942 + L1ME3 LINE L1 1504 1752 -4788 215 122 20 0 chr2 202770736 202770785 -50485798 + (TA)n Simple_repeat Simple_repeat 2 51 0 914 133 92 36 chr2 202770788 202770984 -50485599 - L1M2 LINE L1 -824 5467 5261 467 200 46 1 chr2 202770995 202771129 -50485454 + L1MA8 LINE L1 6164 6311 -1 355 243 51 66 chr2 202771140 202771406 -50485177 + L1ME3 LINE L1 1781 2145 -4572 367 305 55 23 chr2 202771831 202772139 -50484444 + L1ME3 LINE L1 2619 2936 -3604 6582 69 1 3 chr2 202772139 202772998 -50483585 - L1PA6 LINE L1 -1 6153 5297 2161 297 109 38 chr2 202773008 202775485 -50481098 + L1ME3 LINE L1 2951 5603 -937 1793 272 48 58 chr2 202775498 202776366 -50480217 + L1ME3 LINE L1 5696 6555 -1 420 256 31 97 chr2 202776368 202776759 -50479824 + L1M4 LINE L1 4317 4681 -1465 480 345 30 22 chr2 202776880 202777147 -50479436 - MLT1J2 LTR MaLR -146 304 36 232 250 28 0 chr2 202778073 202778145 -50478438 + L1MC4 LINE L1 6614 6687 -1355 5562 102 17 11 chr2 202778613 202779455 -50477128 - L1PA13 LINE L1 0 6163 5317 2083 238 43 67 chr2 202779457 202780471 -50476112 + L1MDa LINE L1 2267 3245 -3295 1994 209 36 0 chr2 202780471 202780888 -50475695 - MSTB1 LTR MaLR 0 432 1 2083 238 43 67 chr2 202780888 202781182 -50475401 + L1MDa LINE L1 3245 3545 -2995 963 175 19 0 chr2 202781182 202781342 -50475241 + FAM SINE Alu 1 163 -12 1074 268 36 42 chr2 202781403 202781952 -50474631 + L1MDa LINE L1 3533 4078 -2462 897 286 41 0 chr2 202781954 202782272 -50474311 + L1M4 LINE L1 4730 5060 -1086 1965 284 57 53 chr2 202782290 202782853 -50473730 - L1P LINE L1 -831 5315 4751 572 193 76 35 chr2 202783310 202783455 -50473128 - LTR40a LTR ERVL -368 151 1 24 0 0 0 chr2 202783810 202783834 -50472749 + AT_rich Low_complexity Low_complexity 1 24 0 398 295 133 49 chr2 202784068 202784353 -50472230 + HAL1 LINE L1 1158 1466 -1041 557 293 48 44 chr2 202784531 202784780 -50471803 + MIR SINE MIR 1 250 -12 2140 113 19 0 chr2 202784937 202785255 -50471328 + L1PA11 LINE L1 5846 6169 -5 1008 222 11 88 chr2 202785320 202785672 -50470911 + L1M4 LINE L1 2 326 -6216 637 250 43 14 chr2 202785705 202785913 -50470670 + L1M4 LINE L1 449 662 -5880 8038 148 35 78 chr2 202785919 202787579 -50469004 + Tigger1 DNA MER2_type 5 1592 -826 991 187 16 5 chr2 202787580 202787767 -50468816 + AluSx SINE Alu 1 189 -123 1378 128 0 0 chr2 202787821 202788017 -50468566 - HUERS-P3 LTR ERV1 -4 8915 8720 659 190 0 0 chr2 202788099 202788220 -50468363 + AluSx SINE Alu 192 312 0 5083 153 14 1 chr2 202788227 202789058 -50467525 + Tigger1 DNA MER2_type 1577 2418 0 1901 226 28 70 chr2 202789059 202789587 -50466996 + L1M4 LINE L1 664 1160 -5382 560 227 23 8 chr2 202789587 202789715 -50466868 - FLAM_A SINE Alu -3 130 1 1901 226 28 70 chr2 202789715 202789855 -50466728 + L1M4 LINE L1 1160 1304 -5238 889 20 0 0 chr2 202789858 202789960 -50466623 + AluYb8 SINE Alu 211 312 -6 290 312 6 29 chr2 202789964 202790137 -50466446 + L1M4 LINE L1 1308 1476 -5066 667 69 10 10 chr2 202790829 202790930 -50465653 + AluYb8 SINE Alu 212 312 -6 692 266 9 22 chr2 202790934 202791163 -50465420 + L1M4 LINE L1 1308 1533 -5009 1184 134 139 0 chr2 202791225 202791326 -50465257 + MER30 DNA MER1_type 1 87 -143 234 62 0 0 chr2 202791326 202791358 -50465225 + (CAA)n Simple_repeat Simple_repeat 2 33 0 1184 134 139 0 chr2 202791358 202791458 -50465125 + MER30 DNA MER1_type 87 230 0 3047 172 46 13 chr2 202791508 202792120 -50464463 - LTR27 LTR ERV1 0 636 5 241 301 109 19 chr2 202792120 202792276 -50464307 - MLT1J2 LTR MaLR -17 433 264 2794 205 13 35 chr2 202792352 202792976 -50463607 - LTR9 LTR ERV1 0 612 3 22537 154 28 46 chr2 202792977 202797397 -50459186 - HUERS-P3b LTR ERV1 -5 7413 3073 2300 193 38 2 chr2 202797397 202797823 -50458760 + LTR8 LTR ERV1 1 441 -250 3470 101 10 66 chr2 202797823 202798400 -50458183 - HUERS-P3b LTR ERV1 -4776 2642 2098 10019 177 34 43 chr2 202798473 202800570 -50456013 - HUERS-P3b LTR ERV1 -5316 2102 25 2699 207 6 76 chr2 202800604 202801260 -50455323 - LTR9 LTR ERV1 0 612 3 1418 213 28 0 chr2 202801469 202801755 -50454828 + MER49 LTR ERV1 1 294 -629 1462 247 6 14 chr2 202801788 202802148 -50454435 + MER4D LTR ERV1 547 903 0 3346 216 123 12 chr2 202802157 202803907 -50452676 + L1MB8 LINE L1 4231 6166 -12 824 202 194 39 chr2 202804015 202804273 -50452310 + AluSg SINE Alu 3 300 0 297 290 103 0 chr2 202804389 202804496 -50452087 + MIR SINE MIR 83 200 -62 22 0 0 0 chr2 202804598 202804620 -50451963 + AT_rich Low_complexity Low_complexity 1 22 0 226 60 80 0 chr2 202805349 202805399 -50451184 - L1MA4A LINE L1 -5 6298 6245 657 252 84 55 chr2 202805916 202806154 -50450429 - MIR SINE MIR 0 262 18 1371 219 43 48 chr2 202806643 202807035 -50449548 + MLT1B LTR MaLR 1 390 0 2120 195 14 174 chr2 202807035 202807960 -50448623 + MLT1B-int LTR MaLR 1 883 -488 430 223 0 45 chr2 202807935 202808047 -50448536 + MLT-int LTR MaLR 647 753 -982 * 1451 233 104 11 chr2 202808237 202808611 -50447972 + MLT1B-int LTR MaLR 1314 1722 -13 1557 195 33 59 chr2 202808631 202809020 -50447563 + MLT1B LTR MaLR 1 379 -11 25 0 0 0 chr2 202809213 202809238 -50447345 + AT_rich Low_complexity Low_complexity 1 25 0 2539 182 119 36 chr2 202809293 202809929 -50446654 - LTR8 LTR ERV1 -1 690 2 241 221 23 23 chr2 202810024 202810110 -50446473 + L1ME LINE L1 2406 2491 -3655 301 262 101 72 chr2 202810144 202810491 -50446092 + L1ME LINE L1 2647 3003 -3143 352 243 51 45 chr2 202810547 202810724 -50445859 + L1ME LINE L1 3111 3288 -2858 359 291 63 33 chr2 202810731 202811527 -50445056 + L1ME LINE L1 4616 5442 -720 273 269 39 29 chr2 202811540 202811644 -50444939 + L1M3d LINE L1 11 115 -5776 288 215 13 51 chr2 202811811 202811890 -50444693 + L1ME LINE L1 5491 5566 -598 21 0 0 0 chr2 202812007 202812028 -50444555 + AT_rich Low_complexity Low_complexity 1 21 0 2571 45 0 3 chr2 202812746 202813055 -50443528 + AluY SINE Alu 1 308 -3 498 255 31 43 chr2 202813090 202813251 -50443332 + MER5A DNA MER1_type 31 189 0 24 0 0 0 chr2 202813773 202813797 -50442786 + AT_rich Low_complexity Low_complexity 1 24 0 263 245 56 28 chr2 202813821 202813964 -50442619 + L1M2 LINE L1 5291 5437 -854 23 0 0 0 chr2 202814282 202814305 -50442278 + AT_rich Low_complexity Low_complexity 1 23 0 2031 96 25 4 chr2 202814305 202814585 -50441998 - AluSc SINE Alu -21 288 3 269 207 8 8 chr2 202816000 202816130 -50440453 + CT-rich Low_complexity Low_complexity 1 130 0 370 248 130 77 chr2 202817769 202818108 -50438475 - L1M4 LINE L1 -2796 3350 2994 253 113 0 38 chr2 202818461 202818514 -50438069 + (TA)n Simple_repeat Simple_repeat 2 52 0 240 82 16 49 chr2 202818514 202818575 -50438008 - L1MCa LINE L1 -4362 2064 2006 291 108 0 46 chr2 202818577 202818642 -50437941 + (TA)n Simple_repeat Simple_repeat 1 62 0 272 184 75 0 chr2 202818829 202818976 -50437607 + (TA)n Simple_repeat Simple_repeat 1 158 0 550 285 121 22 chr2 202819081 202819446 -50437137 - L1ME LINE L1 -515 5655 5255 207 139 0 0 chr2 202819573 202819609 -50436974 + (A)n Simple_repeat Simple_repeat 1 36 0 200 292 45 0 chr2 202819726 202819815 -50436768 + (TA)n Simple_repeat Simple_repeat 2 94 0 23 78 0 0 chr2 202820068 202820119 -50436464 + AT_rich Low_complexity Low_complexity 1 51 0 3601 220 118 81 chr2 202820979 202821642 -50434941 + L1MC3 LINE L1 6152 6789 -996 345 47 0 0 chr2 202821642 202821685 -50434898 + (CA)n Simple_repeat Simple_repeat 2 44 0 3601 220 118 81 chr2 202821685 202821924 -50434659 + L1MC3 LINE L1 6789 7018 -767 314 303 11 0 chr2 202821924 202822013 -50434570 + MLT1F1 LTR MaLR 35 124 -443 3601 220 118 81 chr2 202822013 202822596 -50433987 + L1MC3 LINE L1 7018 7785 0 36 0 0 0 chr2 202826542 202826578 -50430005 + AT_rich Low_complexity Low_complexity 1 36 0 1580 197 0 27 chr2 202826682 202826982 -50429601 - 7SLRNA srpRNA srpRNA -17 303 12 2045 234 90 28 chr2 202827048 202827552 -50429031 + MLT1E1 LTR MaLR 43 590 -64 2185 78 0 3 chr2 202827552 202827891 -50428692 - AluY SINE Alu 0 338 1 2045 234 90 28 chr2 202827891 202827961 -50428622 + MLT1E1 LTR MaLR 590 654 0 1601 291 50 12 chr2 202828214 202828712 -50427871 - LTR40a LTR ERVL -2 517 1 1847 105 0 0 chr2 202829452 202829699 -50426884 - AluSg SINE Alu -63 247 1 334 191 27 45 chr2 202830254 202830364 -50426219 + LTR41 LTR ERVL 651 758 -15 627 286 61 19 chr2 202830544 202830971 -50425612 - Charlie2 DNA MER1_type -184 2678 2234 276 320 118 22 chr2 202831184 202831412 -50425171 - MIR SINE MIR 0 262 13 218 290 15 76 chr2 202831620 202831751 -50424832 + L2 LINE L2 3116 3238 -75 207 0 0 0 chr2 202832389 202832412 -50424171 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1630 133 73 3 chr2 202832526 202832812 -50423771 + AluSx SINE Alu 1 306 -6 213 226 32 16 chr2 202832865 202832927 -50423656 + A-rich Low_complexity Low_complexity 2 64 0 23 33 0 0 chr2 202833355 202833385 -50423198 + AT_rich Low_complexity Low_complexity 1 30 0 2066 121 3 16 chr2 202834008 202834314 -50422269 - AluY SINE Alu -9 302 1 2944 238 36 39 chr2 202834424 202835316 -50421267 - MER63C DNA MER1_type 0 930 42 942 239 18 9 chr2 202835828 202836046 -50420537 - MER58A DNA MER1_type -2 222 3 462 281 14 7 chr2 202836552 202836698 -50419885 + L1MCa LINE L1 36 182 -6244 1069 200 143 32 chr2 202836700 202837015 -50419568 + MLT1C LTR MaLR 1 350 -117 1514 124 14 0 chr2 202837258 202837476 -50419107 - AluSg/x SINE Alu -9 303 83 782 196 13 20 chr2 202839900 202840053 -50416530 - MLT1D LTR MaLR -353 152 1 34 0 0 0 chr2 202840237 202840271 -50416312 + AT_rich Low_complexity Low_complexity 1 34 0 30 45 0 0 chr2 202841681 202841725 -50414858 + AT_rich Low_complexity Low_complexity 1 44 0 262 318 24 0 chr2 202841884 202841969 -50414614 + L2 LINE L2 3225 3311 -2 1046 316 144 13 chr2 202842567 202843038 -50413545 + L3 LINE CR1 1044 1576 -1 26 50 0 0 chr2 202843493 202843533 -50413050 + AT_rich Low_complexity Low_complexity 1 40 0 182 278 139 7 chr2 202843713 202843857 -50412726 - L2 LINE L2 -38 3275 3113 455 315 117 40 chr2 202844109 202844588 -50411995 - L2 LINE L2 -1635 1679 1164 249 211 0 0 chr2 202844816 202844873 -50411710 - L1MD3 LINE L1 -10 7985 7929 33 25 0 0 chr2 202845557 202845597 -50410986 + AT_rich Low_complexity Low_complexity 1 40 0 2549 249 50 25 chr2 202845598 202846060 -50410523 + L1ME1 LINE L1 4390 4839 -1327 2147 121 7 0 chr2 202846060 202846365 -50410218 - AluSg SINE Alu -3 307 1 2549 249 50 25 chr2 202846365 202846958 -50409625 + L1ME1 LINE L1 4839 5495 -671 327 85 0 0 chr2 202846958 202847005 -50409578 + (CA)n Simple_repeat Simple_repeat 2 48 0 2549 249 50 25 chr2 202847005 202847497 -50409086 + L1ME1 LINE L1 5495 5974 -192 756 234 50 54 chr2 202847511 202847733 -50408850 - MLT1E LTR MaLR -364 229 9 24 77 0 0 chr2 202848031 202848083 -50408500 + AT_rich Low_complexity Low_complexity 1 52 0 1629 121 7 14 chr2 202848123 202848403 -50408180 + L1MA1 LINE L1 6025 6302 0 36 40 0 0 chr2 202848403 202848453 -50408130 + AT_rich Low_complexity Low_complexity 1 50 0 1564 219 40 9 chr2 202848636 202848983 -50407600 - MLT1A1 LTR MaLR -4 361 4 212 250 25 38 chr2 202850999 202851079 -50405504 + GA-rich Low_complexity Low_complexity 4 82 0 33 18 0 36 chr2 202851631 202851653 -50404930 + AT_rich Low_complexity Low_complexity 1 22 -31 2307 89 3 0 chr2 202851653 202851944 -50404639 + AluSx SINE Alu 3 294 -18 33 18 0 36 chr2 202851944 202851976 -50404607 + AT_rich Low_complexity Low_complexity 22 53 0 466 313 64 9 chr2 202852090 202852323 -50404260 + MLT1H LTR MaLR 1 246 -303 1258 317 77 19 chr2 202852959 202854188 -50402395 + L1M4 LINE L1 2645 3945 -2201 22 56 0 0 chr2 202854532 202854568 -50402015 + AT_rich Low_complexity Low_complexity 1 36 0 450 0 0 0 chr2 202856423 202856473 -50400110 + (TC)n Simple_repeat Simple_repeat 1 50 0 195 69 0 0 chr2 202856504 202856533 -50400050 + (CAGA)n Simple_repeat Simple_repeat 2 30 0 27 29 0 0 chr2 202856629 202856663 -50399920 + AT_rich Low_complexity Low_complexity 1 34 0 1361 151 64 0 chr2 202857054 202857305 -50399278 - L1MA5A LINE L1 0 6297 6031 355 174 23 0 chr2 202857364 202857450 -50399133 + (TA)n Simple_repeat Simple_repeat 2 89 0 887 177 25 27 chr2 202857673 202858007 -50398576 - MER82 DNA MER2_type -188 465 69 1262 201 47 61 chr2 202858007 202858397 -50398186 - MLT1A2 LTR MaLR 0 467 4 268 235 15 0 chr2 202858400 202858468 -50398115 - MER82 DNA MER2_type -580 73 5 28 0 0 0 chr2 202858643 202858671 -50397912 + AT_rich Low_complexity Low_complexity 1 28 0 893 335 36 3 chr2 202860061 202860419 -50396164 + LTR16C LTR ERVL 89 458 -33 3546 17 0 1 chr2 202860657 202861155 -50395428 - L1P1 LINE L1 -493 5662 5166 755 40 0 20 chr2 202861155 202861246 -50395337 + L1PA2 LINE L1 6055 6153 -2 377 352 104 20 chr2 202862040 202862338 -50394245 + ERVL LTR ERVL 1347 1669 -4095 329 261 85 39 chr2 202862518 202862648 -50393935 + L1MC/D LINE L1 3240 3375 -2771 225 305 53 0 chr2 202863390 202863485 -50393098 + L1MC/D LINE L1 5555 5654 -508 767 301 126 69 chr2 202863505 202864028 -50392555 - MLT2F LTR ERVL 0 663 97 2659 100 3 13 chr2 202864028 202864407 -50392176 + THE1C LTR MaLR 1 375 0 767 301 126 69 chr2 202864407 202864510 -50392073 - MLT2F LTR ERVL -566 97 1 263 282 26 17 chr2 202864773 202864890 -50391693 + LTR67 LTR ERVL 439 556 -1 327 231 116 0 chr2 202864896 202865017 -50391566 + L1MC/D LINE L1 5665 5799 -2009 25 65 0 0 chr2 202865783 202865829 -50390754 + AT_rich Low_complexity Low_complexity 1 46 0 3183 128 17 49 chr2 202866433 202866962 -50389621 + MER1A DNA MER1_type 17 528 -1 192 393 69 21 chr2 202867038 202867183 -50389400 + L2 LINE L2 2953 3104 -168 3888 69 2 6 chr2 202867826 202868346 -50388237 + L1PA8 LINE L1 5654 6171 -1 21 0 0 0 chr2 202868446 202868467 -50388116 + AT_rich Low_complexity Low_complexity 1 21 0 204 385 0 0 chr2 202869370 202869448 -50387135 + L2 LINE L2 2927 3004 -268 795 151 102 12 chr2 202869449 202869615 -50386968 + L1M2 LINE L1 5299 5479 -812 1121 108 5 112 chr2 202869615 202869829 -50386754 + AluSg/x SINE Alu 112 302 -10 437 212 93 0 chr2 202869829 202869947 -50386636 + L1MA8 LINE L1 6163 6291 0 694 218 55 40 chr2 202870916 202871118 -50385465 + MER3 DNA MER1_type 1 205 -4 805 60 57 7 chr2 202871467 202872354 -50384229 + (TA)n Simple_repeat Simple_repeat 1 930 0 27 116 0 0 chr2 202872709 202872855 -50383728 + AT_rich Low_complexity Low_complexity 1 146 0 3491 117 28 2 chr2 202874275 202874812 -50381771 - MER41A LTR ERV1 -3 551 1 237 303 92 13 chr2 202875668 202875744 -50380839 - MER5B DNA MER1_type -76 102 21 315 336 55 51 chr2 202876520 202876755 -50379828 - L2 LINE L2 -214 3058 2823 236 354 62 21 chr2 202877018 202877210 -50379373 - L2 LINE L2 -943 2371 2172 195 297 44 55 chr2 202877394 202877485 -50379098 - L2 LINE L2 -991 2323 2234 244 196 0 0 chr2 202878397 202878443 -50378140 + MIR SINE MIR 212 257 -5 2417 215 68 38 chr2 202878805 202879438 -50377145 + MER82 DNA MER2_type 2 653 0 189 268 36 0 chr2 202879924 202879980 -50376603 - MIR SINE MIR -69 139 82 1895 166 0 3 chr2 202880002 202880303 -50376280 + AluSx SINE Alu 1 300 -12 1358 218 7 31 chr2 202881211 202881532 -50375051 + AluJo SINE Alu 1 314 0 217 327 50 40 chr2 202882393 202882494 -50374089 + L2 LINE L2 1401 1502 -1812 366 294 35 14 chr2 202882742 202882885 -50373698 + MLT1E3 LTR MaLR 356 501 -123 664 158 158 0 chr2 202882906 202883045 -50373538 + MLT1E LTR MaLR 433 593 0 191 178 41 14 chr2 202883164 202883237 -50373346 + (TAGA)n Simple_repeat Simple_repeat 2 76 0 2120 125 3 0 chr2 202883262 202883627 -50372956 + AluSp SINE Alu 1 366 0 342 370 22 0 chr2 202884049 202884187 -50372396 + MIR SINE MIR 22 162 -100 256 200 50 0 chr2 202884975 202885035 -50371548 + (CATATA)n Simple_repeat Simple_repeat 3 65 0 1122 201 62 5 chr2 202885578 202885787 -50370796 + Tigger5 DNA MER2_type 1 221 -2102 * 2350 190 29 12 chr2 202885784 202886264 -50370319 + Tigger5 DNA MER2_type 1835 2322 -1 265 203 0 16 chr2 202886451 202886515 -50370068 + (CATATA)n Simple_repeat Simple_repeat 4 66 0 2243 68 0 4 chr2 202887971 202888285 -50368298 - AluY SINE Alu 0 313 1 603 186 13 21 chr2 202888388 202888623 -50367960 + L1MC2 LINE L1 5932 6320 -24 392 220 202 0 chr2 202888865 202888974 -50367609 + MER50 LTR ERV1 1 131 -603 2907 106 72 12 chr2 202888974 202889457 -50367126 + L1PB2 LINE L1 5636 6147 -4 22 0 0 0 chr2 202889459 202889481 -50367102 + AT_rich Low_complexity Low_complexity 1 22 0 1421 237 179 37 chr2 202889511 202890030 -50366553 + MER50 LTR ERV1 119 711 -23 1182 146 24 5 chr2 202890254 202890460 -50366123 + L1MC2 LINE L1 5955 6164 -180 192 352 29 29 chr2 202891186 202891291 -50365292 - MER5A DNA MER1_type -49 140 36 277 210 0 0 chr2 202891486 202891548 -50365035 - L1PA13 LINE L1 -19 6144 6083 21 71 0 0 chr2 202892156 202892198 -50364385 + AT_rich Low_complexity Low_complexity 1 42 0 284 238 0 10 chr2 202892352 202892453 -50364130 + (TA)n Simple_repeat Simple_repeat 2 101 0 229 289 200 11 chr2 202892993 202893083 -50363500 - MIR SINE MIR -100 162 56 1051 174 33 0 chr2 202894020 202894204 -50362379 + MER20 DNA MER1_type 30 219 0 29 60 0 0 chr2 202894306 202894356 -50362227 + AT_rich Low_complexity Low_complexity 1 50 0 420 20 0 0 chr2 202894552 202894629 -50361954 + (GA)n Simple_repeat Simple_repeat 1 126 0 420 20 0 0 chr2 202894629 202894678 -50361905 + (GA)n Simple_repeat Simple_repeat 1 49 0 520 304 12 23 chr2 202894688 202894859 -50361724 + MIR SINE MIR 20 188 -74 428 62 0 15 chr2 202895196 202895261 -50361322 + (TA)n Simple_repeat Simple_repeat 2 65 0 300 143 0 0 chr2 202898005 202898047 -50358536 + 5S rRNA rRNA 1 42 -79 2623 87 45 0 chr2 202898271 202898651 -50357932 + L1PA13 LINE L1 5767 6163 0 22 0 0 0 chr2 202899161 202899183 -50357400 + AT_rich Low_complexity Low_complexity 1 22 0 303 179 41 16 chr2 202899690 202899813 -50356770 + (TA)n Simple_repeat Simple_repeat 1 126 0 2544 92 11 0 chr2 202900636 202900993 -50355590 - L1PA7 LINE L1 -1 6153 5793 2294 59 7 0 chr2 202900993 202901281 -50355302 + L1PA7 LINE L1 5505 5794 -360 2523 59 0 0 chr2 202901288 202901594 -50354989 - AluY SINE Alu -5 306 1 21 0 0 0 chr2 202902132 202902153 -50354430 + AT_rich Low_complexity Low_complexity 1 21 0 448 312 121 42 chr2 202902157 202902470 -50354113 - ERVL LTR ERVL -609 5155 4801 1701 132 0 8 chr2 202902470 202902721 -50353862 + AluSq SINE Alu 4 252 -61 448 312 121 42 chr2 202902721 202902811 -50353772 - ERVL LTR ERVL -963 4801 4720 4251 92 5 0 chr2 202903002 202903619 -50352964 - L1P LINE L1 -961 5185 4566 3268 74 2 0 chr2 202903619 202904052 -50352531 + L1PA7 LINE L1 5707 6141 -13 607 343 54 29 chr2 202904230 202904784 -50351799 - ERVL LTR ERVL -1272 4213 3646 28 29 0 0 chr2 202904840 202904875 -50351708 + AT_rich Low_complexity Low_complexity 1 35 0 1190 219 24 94 chr2 202905077 202905451 -50351132 + MLT1A1 LTR MaLR 1 348 -17 1477 293 91 19 chr2 202905565 202906440 -50350143 + L1 LINE L1 3192 4129 -2017 7638 192 44 92 chr2 202906455 202907024 -50349559 + L1MC3 LINE L1 5572 6166 -1619 2075 203 56 61 chr2 202907024 202907581 -50349002 + MLT2B3 LTR ERVL 1 554 0 7638 192 44 92 chr2 202907581 202908767 -50347816 + L1MC3 LINE L1 6166 7193 -592 188 67 33 0 chr2 202908767 202908797 -50347786 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 7638 192 44 92 chr2 202908797 202909364 -50347219 + L1MC3 LINE L1 7193 7785 0 21 0 0 0 chr2 202910674 202910695 -50345888 + AT_rich Low_complexity Low_complexity 1 21 0 25 51 0 0 chr2 202911845 202911884 -50344699 + AT_rich Low_complexity Low_complexity 1 39 0 24 53 0 0 chr2 202911911 202911949 -50344634 + AT_rich Low_complexity Low_complexity 1 38 0 31 44 0 0 chr2 202912086 202912131 -50344452 + AT_rich Low_complexity Low_complexity 1 45 0 286 279 29 19 chr2 202912875 202912979 -50343604 + MIR SINE MIR 86 190 -72 322 347 51 0 chr2 202912995 202913093 -50343490 + L2 LINE L2 3158 3260 -12 193 29 59 0 chr2 202915715 202915749 -50340834 + (TA)n Simple_repeat Simple_repeat 1 36 0 25 0 0 0 chr2 202915834 202915859 -50340724 + AT_rich Low_complexity Low_complexity 1 25 0 357 306 88 27 chr2 202916807 202916954 -50339629 + MIR SINE MIR 59 214 -48 2716 7 0 0 chr2 202918969 202919269 -50337314 + AluYa5 SINE Alu 1 300 -11 598 341 70 7 chr2 202919421 202919708 -50336875 + MER102b DNA MER1_type 37 341 0 1685 90 4 0 chr2 202920052 202920286 -50336297 + L1PA11 LINE L1 5934 6168 -6 317 109 0 0 chr2 202921081 202921127 -50335456 - LTR9B LTR ERV1 -210 434 389 448 290 39 26 chr2 202921170 202921325 -50335258 + MIR SINE MIR 106 262 0 378 0 0 0 chr2 202922477 202922519 -50334064 + (TG)n Simple_repeat Simple_repeat 2 43 0 352 321 86 43 chr2 202925698 202925885 -50330698 - MIR3 SINE MIR -10 198 4 359 259 72 56 chr2 202926022 202926273 -50330310 + L1MC5 LINE L1 7393 7647 -314 22 0 0 0 chr2 202926415 202926437 -50330146 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 202927019 202927047 -50329536 + AT_rich Low_complexity Low_complexity 1 28 0 327 220 83 68 chr2 202927883 202928015 -50328568 + MER5B DNA MER1_type 33 166 -12 345 261 133 21 chr2 202928028 202928148 -50328435 - MER5A DNA MER1_type -6 183 27 476 339 68 9 chr2 202929964 202930185 -50326398 - MIR SINE MIR -26 236 3 2125 107 0 0 chr2 202930374 202930696 -50325887 - AluY SINE Alu 0 323 2 36 0 0 0 chr2 202930722 202930758 -50325825 + AT_rich Low_complexity Low_complexity 1 36 0 1272 206 126 61 chr2 202930995 202931305 -50325278 + LTR48 LTR ERV1 4 223 -319 2046 120 3 17 chr2 202931305 202931606 -50324977 - AluSx SINE Alu -15 297 1 1272 206 126 61 chr2 202931606 202931948 -50324635 + LTR48 LTR ERV1 223 542 0 2771 162 34 30 chr2 202932784 202933341 -50323242 - MER89 LTR ERV1 0 559 1 1056 190 70 25 chr2 202936210 202936526 -50320057 - L1MCa LINE L1 -3123 3303 2974 329 261 11 11 chr2 202936579 202936671 -50319912 + L1M4 LINE L1 4676 4767 -1379 318 292 22 0 chr2 202936671 202936760 -50319823 - MER20 DNA MER1_type -128 91 1 1440 215 110 28 chr2 202937196 202937587 -50318996 + MLT1D LTR MaLR 1 423 -82 423 154 0 0 chr2 202937586 202937651 -50318932 - HSMAR2 DNA Mariner -960 342 278 * 9494 179 7 6 chr2 202937657 202940521 -50316062 - L1PB1 LINE L1 -8 6143 3279 5779 133 19 23 chr2 202940521 202941469 -50315114 + HSMAR2 DNA Mariner 358 1301 -1 448 139 70 0 chr2 202941517 202941603 -50314980 + MLT1D LTR MaLR 412 503 -2 237 235 151 49 chr2 202941814 202942006 -50314577 - L1MCa LINE L1 -861 1926 1479 592 278 70 0 chr2 202942409 202942668 -50313915 - L1MCa LINE L1 -2885 3541 3265 1805 297 55 29 chr2 202942680 202943464 -50313119 - L1MCa LINE L1 -5409 1198 395 1044 209 175 3 chr2 202944374 202944666 -50311917 + MER2 DNA MER2_type 2 343 -1 5813 126 16 15 chr2 202945036 202945972 -50310611 + L1MA3 LINE L1 5369 6305 0 248 170 19 0 chr2 202946902 202946955 -50309628 - L1MCa LINE L1 -4362 2064 2011 270 281 8 31 chr2 202947493 202947612 -50308971 + MIR SINE MIR 15 225 -37 573 254 8 0 chr2 202949220 202949350 -50307233 - MER94 DNA DNA 0 134 4 1573 276 101 9 chr2 202950637 202951210 -50305373 + MLT1E2 LTR MaLR 1 626 0 24 67 0 0 chr2 202951783 202951828 -50304755 + AT_rich Low_complexity Low_complexity 1 45 0 26 50 0 0 chr2 202952414 202952454 -50304129 + AT_rich Low_complexity Low_complexity 1 40 0 970 223 15 0 chr2 202952525 202952731 -50303852 - MER3 DNA MER1_type 0 209 1 34 0 0 0 chr2 202954261 202954295 -50302288 + AT_rich Low_complexity Low_complexity 1 34 0 2299 75 0 29 chr2 202954657 202954964 -50301619 - AluY SINE Alu -3 308 11 6364 88 17 2 chr2 202955259 202956535 -50300048 - L1PA7 LINE L1 0 6154 4869 480 267 40 104 chr2 202956698 202957024 -50299559 - L2 LINE L2 -8 3305 3001 3178 133 74 0 chr2 202957286 202957799 -50298784 - MER41C LTR ERV1 0 554 4 233 219 92 67 chr2 202957946 202958065 -50298518 - L2 LINE L2 -2 3311 3190 22 0 0 0 chr2 202958362 202958384 -50298199 + AT_rich Low_complexity Low_complexity 1 22 0 289 248 89 38 chr2 202958674 202958831 -50297752 + L1 LINE L1 3623 3787 -2359 662 275 98 4 chr2 202958967 202959203 -50297380 - MIR SINE MIR -3 259 2 22 35 0 0 chr2 202959224 202959253 -50297330 + AT_rich Low_complexity Low_complexity 1 29 0 40 21 0 0 chr2 202959355 202959402 -50297181 + AT_rich Low_complexity Low_complexity 1 47 0 2539 99 6 0 chr2 202959421 202959776 -50296807 - L1PA13 LINE L1 -11 6152 5796 183 42 0 0 chr2 202960232 202960256 -50296327 + (CA)n Simple_repeat Simple_repeat 1 24 0 21 0 0 0 chr2 202960542 202960563 -50296020 + AT_rich Low_complexity Low_complexity 1 21 0 1758 21 0 99 chr2 202961069 202961312 -50295271 - AluY SINE Alu -20 291 73 386 289 95 91 chr2 202962707 202962949 -50293634 - MIR SINE MIR -3 259 17 240 355 132 16 chr2 202963906 202964157 -50292426 + L2 LINE L2 1819 2098 -1216 2004 123 5 93 chr2 202964157 202964556 -50292027 + THE1B LTR MaLR 1 364 0 9967 122 22 28 chr2 202964556 202966145 -50290438 + THE1B-int LTR MaLR 1 1580 0 2555 116 3 3 chr2 202966146 202966507 -50290076 + THE1B LTR MaLR 2 362 -2 354 305 26 111 chr2 202966709 202967089 -50289494 + L2 LINE L2 2186 2533 -781 4169 211 56 15 chr2 202967353 202968884 -50287699 - L1MD1 LINE L1 0 6636 5050 280 229 39 57 chr2 202968890 202969036 -50287547 - L1MD1 LINE L1 -4963 1577 1431 333 221 0 70 chr2 202969036 202969122 -50287461 - Tigger4(Zombi) DNA MER2_type 0 2731 2652 325 179 0 0 chr2 202969102 202969158 -50287425 - Tigger4(Zombi) DNA MER2_type -2674 57 2 * 3579 238 147 47 chr2 202969159 202970408 -50286175 - L1MD1 LINE L1 -5108 1432 59 242 270 135 0 chr2 202970533 202970622 -50285961 - MIR SINE MIR -114 148 48 329 304 64 82 chr2 202970699 202970919 -50285664 + MIR SINE MIR 31 246 -16 356 265 10 0 chr2 202971477 202971575 -50285008 + MER99 DNA DNA 2 100 -728 1851 260 64 18 chr2 202971596 202972193 -50284390 + MER99 DNA DNA 202 825 -3 27 29 0 0 chr2 202972305 202972339 -50284244 + AT_rich Low_complexity Low_complexity 1 34 0 17514 55 2 2 chr2 202972710 202975715 -50280868 - L1PA5 LINE L1 -3 6151 3146 250 56 0 0 chr2 202975715 202975751 -50280832 - L1PA5 LINE L1 -3278 2868 2833 180 238 0 24 chr2 202976378 202976420 -50280163 - L2 LINE L2 -250 3063 3023 198 0 0 0 chr2 202976553 202976575 -50280008 + (T)n Simple_repeat Simple_repeat 1 22 0 23 0 0 0 chr2 202976692 202976715 -50279868 + AT_rich Low_complexity Low_complexity 1 23 0 23441 38 0 9 chr2 202976715 202980362 -50276221 + L1PA4 LINE L1 2517 6159 0 1753 169 3 14 chr2 202982764 202983080 -50273503 - AluSx SINE Alu 0 313 1 25 0 0 0 chr2 202983080 202983105 -50273478 + AT_rich Low_complexity Low_complexity 1 25 0 280 269 13 0 chr2 202983105 202983183 -50273400 - L2 LINE L2 -8 3305 3227 1183 136 114 61 chr2 202983202 202983466 -50273117 - L1MA7 LINE L1 -25 6266 5989 276 260 125 10 chr2 202984447 202984543 -50272040 - MIR SINE MIR 0 262 156 1868 138 58 25 chr2 202984601 202984962 -50271621 - THE1C LTR MaLR -2 373 1 23 78 0 0 chr2 202985105 202985156 -50271427 + AT_rich Low_complexity Low_complexity 1 51 0 21 0 0 0 chr2 202988691 202988712 -50267871 + AT_rich Low_complexity Low_complexity 1 21 0 306 106 0 0 chr2 202988754 202988801 -50267782 + (TG)n Simple_repeat Simple_repeat 2 48 0 2153 116 0 3 chr2 202989804 202990107 -50266476 - AluSx SINE Alu -10 302 1 21 0 0 0 chr2 202991366 202991387 -50265196 + AT_rich Low_complexity Low_complexity 1 21 0 453 76 0 0 chr2 202991475 202991541 -50265042 + (TA)n Simple_repeat Simple_repeat 2 67 0 335 169 0 0 chr2 202993745 202993804 -50262779 - MER99 DNA DNA -578 250 192 36 0 0 0 chr2 202994120 202994156 -50262427 + AT_rich Low_complexity Low_complexity 1 36 0 422 270 20 0 chr2 202994435 202994535 -50262048 - MER99 DNA DNA -725 103 2 386 220 92 64 chr2 202994629 202994802 -50261781 + Charlie7 DNA MER1_type 348 525 -2087 1849 262 69 25 chr2 202995205 202995888 -50260695 + HsTC2a DNA Tc2 29 741 -3 1866 175 0 3 chr2 202995890 202996199 -50260384 + AluJb SINE Alu 1 308 -4 284 333 153 9 chr2 202996210 202996438 -50260145 - MIR SINE MIR -1 261 1 325 293 60 53 chr2 202997772 202997922 -50258661 - L2 LINE L2 0 3272 3122 354 277 6 102 chr2 202999307 202999473 -50257110 - MER5B DNA MER1_type -21 157 8 199 264 33 83 chr2 202999904 203000025 -50256558 - MIR SINE MIR -27 235 121 226 279 93 21 chr2 203000048 203000188 -50256395 - L1M2 LINE L1 -664 5648 5499 39 22 0 0 chr2 203000243 203000289 -50256294 + AT_rich Low_complexity Low_complexity 1 46 0 300 243 10 29 chr2 203000289 203000392 -50256191 - L1ME LINE L1 -684 5437 5337 2435 271 49 25 chr2 203000448 203001667 -50254916 - L1ME2 LINE L1 -9 6155 4900 * 3096 222 49 63 chr2 203001665 203002681 -50253902 + L1MD1 LINE L1 5216 6229 -13 378 209 48 9 chr2 203002684 203002789 -50253794 - L1ME2 LINE L1 -1241 4905 4797 233 0 0 59 chr2 203002799 203002833 -50253750 + (TAAAAA)n Simple_repeat Simple_repeat 4 35 0 13939 31 0 4 chr2 203002854 203005356 -50251227 - L1PA3 LINE L1 0 6155 3706 2237 169 21 2 chr2 203005605 203006026 -50250557 + L1MA5 LINE L1 5866 6294 -6 418 296 132 6 chr2 203006047 203006206 -50250377 - MIR SINE MIR -71 191 13 1404 258 59 48 chr2 203008563 203008674 -50247909 + L1ME3 LINE L1 6 114 -6295 1861 107 4 0 chr2 203008674 203008918 -50247665 + AluSg SINE Alu 57 301 -9 1404 258 59 48 chr2 203008918 203009611 -50246972 + L1ME3 LINE L1 114 950 -5459 1594 190 18 21 chr2 203009618 203009945 -50246638 - L1MA7 LINE L1 -172 6119 5794 200 33 0 33 chr2 203009946 203009976 -50246607 + (TA)n Simple_repeat Simple_repeat 1 29 0 1525 228 55 28 chr2 203009982 203010631 -50245952 + L1ME3 LINE L1 938 1621 -4785 1569 203 81 189 chr2 203010632 203011611 -50244972 + LTR1B LTR ERV1 1 1020 0 981 233 23 8 chr2 203011611 203011877 -50244706 + L1ME3 LINE L1 1620 1889 -4517 3052 253 48 34 chr2 203011890 203012503 -50244080 + L1ME3 LINE L1 2494 3097 -3309 2054 124 0 0 chr2 203012503 203012839 -50243744 - AluSx SINE Alu 0 336 1 3052 253 48 34 chr2 203012839 203013561 -50243022 + L1ME3 LINE L1 3097 3849 -2557 3655 214 55 27 chr2 203014088 203015115 -50241468 - Charlie1a DNA MER1_type -311 1144 89 2105 252 86 51 chr2 203015137 203016364 -50240219 + L1ME3 LINE L1 5077 6374 -48 189 74 0 0 chr2 203016364 203016391 -50240192 + (TG)n Simple_repeat Simple_repeat 2 28 0 2105 252 86 51 chr2 203016391 203016416 -50240167 + L1ME3 LINE L1 6374 6397 -25 30 45 0 0 chr2 203016693 203016737 -50239846 + AT_rich Low_complexity Low_complexity 1 44 0 1775 183 16 0 chr2 203016717 203017023 -50239560 - AluSx SINE Alu -1 311 1 402 255 113 42 chr2 203017250 203017462 -50239121 + L1MC4a LINE L1 5702 5928 -1880 2141 93 0 48 chr2 203017563 203017873 -50238710 - AluSp SINE Alu -18 295 1 13121 55 15 4 chr2 203018872 203021308 -50235275 - L1PA5 LINE L1 -3 6151 3696 423 236 94 0 chr2 203021470 203021597 -50234986 - MIR SINE MIR -86 176 38 428 224 10 10 chr2 203021687 203021785 -50234798 - MER63 DNA MER1_type -291 771 674 2223 166 24 49 chr2 203021833 203022137 -50234446 + Tigger7 DNA MER2_type 32 324 -409 2215 93 4 0 chr2 203022137 203022453 -50234130 + AluSc SINE Alu 1 317 0 2223 166 24 49 chr2 203022453 203022599 -50233984 + Tigger7 DNA MER2_type 324 472 -261 413 171 67 9 chr2 203024766 203024871 -50231712 - LTR67 LTR ERVL -21 536 426 9184 35 2 0 chr2 203025171 203026275 -50230308 - L1P LINE L1 -3148 2998 1893 214 307 34 45 chr2 203026393 203026481 -50230102 - MIR SINE MIR -98 164 78 198 339 0 0 chr2 203026702 203026761 -50229822 - L2 LINE L2 -9 3263 3205 259 296 50 36 chr2 203026995 203027215 -50229368 - L2 LINE L2 -425 2889 2667 285 253 0 0 chr2 203027830 203027913 -50228670 + A-rich Low_complexity Low_complexity 1 83 0 403 210 198 19 chr2 203027956 203028113 -50228470 + MIR SINE MIR 5 189 -73 286 326 57 7 chr2 203028223 203028364 -50228219 + L3 LINE CR1 1404 1551 -26 4146 29 4 0 chr2 203028763 203029247 -50227336 + L1PA4 LINE L1 5670 6155 0 22 0 0 0 chr2 203029250 203029272 -50227311 + AT_rich Low_complexity Low_complexity 1 22 0 1404 56 6 0 chr2 203029280 203029459 -50227124 + L1PA8 LINE L1 5993 6172 0 479 258 8 0 chr2 203029734 203029854 -50226729 - MER5A DNA MER1_type -5 184 64 833 231 68 49 chr2 203029866 203030130 -50226453 + MLT1C LTR MaLR 6 274 -193 224 352 66 11 chr2 203030791 203030973 -50225610 + L2 LINE L2 2897 3088 -184 225 270 54 14 chr2 203031615 203031689 -50224894 - L2 LINE L2 0 3272 3196 185 321 0 0 chr2 203031898 203031954 -50224629 + L2 LINE L2 3201 3256 -16 1697 192 0 6 chr2 203032389 203032702 -50223881 + AluJb SINE Alu 1 311 -1 470 255 14 21 chr2 203032813 203032958 -50223625 + L1M4 LINE L1 2969 3112 -3034 2236 127 59 0 chr2 203032981 203033304 -50223279 + LTR18A LTR ERVL 16 357 0 3771 211 7 4 chr2 203033328 203034021 -50222562 + HERVL18 LTR ERVL 791 1485 -4562 414 258 136 36 chr2 203034679 203034862 -50221721 + MIR SINE MIR 12 211 -51 874 203 109 64 chr2 203035544 203035855 -50220728 - L1ME3A LINE L1 -29 6141 5817 473 295 80 8 chr2 203035897 203036134 -50220449 + L1MC/D LINE L1 5318 5571 -2237 274 265 15 0 chr2 203036164 203036232 -50220351 + L1MC/D LINE L1 5694 5762 -2046 465 145 48 0 chr2 203036694 203036777 -50219806 - MLT1D LTR MaLR 0 505 419 511 264 23 29 chr2 203036883 203037057 -50219526 - MIR SINE MIR -89 173 1 631 294 86 30 chr2 203038645 203039006 -50217577 + L2 LINE L2 2879 3259 -54 1955 143 3 34 chr2 203039156 203039478 -50217105 + AluSx SINE Alu 1 312 0 381 260 0 0 chr2 203039922 203039999 -50216584 - MER58A DNA MER1_type -30 77 1 1314 311 67 27 chr2 203040467 203041061 -50215522 - HERVL LTR ERVL -2319 3335 2718 182 283 0 0 chr2 203041593 203041646 -50214937 + L2 LINE L2 2837 2889 -424 533 161 14 1 chr2 203041674 203041773 -50214810 + MLT1D LTR MaLR 367 505 0 2250 157 22 31 chr2 203043057 203043510 -50213073 - L1MB3 LINE L1 -3 6180 5732 979 202 72 101 chr2 203043514 203043890 -50212693 + MLT1A1 LTR MaLR 1 365 0 247 135 27 0 chr2 203043894 203043931 -50212652 + MLT1A1-int LTR MaLR 5 42 -1329 1983 220 42 53 chr2 203043959 203044431 -50212152 + MLT1A1-int LTR MaLR 469 935 -800 457 299 57 0 chr2 203045157 203045361 -50211222 - MIR SINE MIR 0 262 48 270 291 120 8 chr2 203045361 203045478 -50211105 - LTR67 LTR ERVL 0 557 428 963 126 7 0 chr2 203046085 203046220 -50210363 - AluSq/x SINE Alu -177 136 1 282 222 37 25 chr2 203047776 203047857 -50208726 - LTR10E LTR ERV1 -551 82 1 308 143 238 60 chr2 203047861 203047945 -50208638 - LTR8 LTR ERV1 -592 99 1 2214 123 3 0 chr2 203048097 203048406 -50208177 - AluSx SINE Alu 0 312 3 228 111 0 0 chr2 203048461 203048497 -50208086 + (TTCA)n Simple_repeat Simple_repeat 3 38 0 201 220 0 51 chr2 203048513 203048572 -50208011 + MIR3 SINE MIR 15 70 -138 249 226 16 16 chr2 203048787 203048849 -50207734 + (TAG)n Simple_repeat Simple_repeat 1 62 0 1143 93 33 0 chr2 203051083 203051233 -50205350 - THE1B LTR MaLR -209 155 1 751 290 112 0 chr2 203051242 203051528 -50205055 - LTR33 LTR ERVL -201 320 3 1186 118 180 4 chr2 203052432 203052704 -50203879 - THE1C LTR MaLR 0 375 56 1226 130 14 43 chr2 203052827 203053034 -50203549 + THE1B LTR MaLR 50 250 -114 1028 129 12 35 chr2 203053019 203053190 -50203393 + THE1B LTR MaLR 198 364 0 * 1481 179 38 104 chr2 203053191 203053647 -50202936 - MLT1C LTR MaLR -19 448 18 283 333 10 10 chr2 203053684 203053780 -50202803 - MER5A DNA MER1_type -91 98 3 490 211 124 19 chr2 203053929 203054090 -50202493 + MIR SINE MIR 36 213 -49 2659 176 8 30 chr2 203054311 203054810 -50201773 - MER82 DNA MER2_type -136 517 30 227 343 19 19 chr2 203055495 203055603 -50200980 + MIR SINE MIR 33 140 -122 719 247 194 53 chr2 203059854 203060271 -50196312 + MLT1H1 LTR MaLR 78 553 -2 1202 203 27 35 chr2 203060326 203060587 -50195996 + MLT1A2 LTR MaLR 2 260 -114 367 371 27 9 chr2 203061390 203061611 -50194972 + MIR SINE MIR 3 227 -35 1028 167 0 18 chr2 203061726 203061894 -50194689 - FAM SINE Alu -15 170 6 834 274 151 30 chr2 203061924 203062256 -50194327 - MLT1K LTR MaLR -189 399 28 597 221 71 21 chr2 203062491 203062731 -50193852 + Tigger4(Zombi) DNA MER2_type 2480 2731 0 249 290 29 0 chr2 203063187 203063256 -50193327 - Charlie8 DNA MER1_type 0 2417 2347 2485 138 73 0 chr2 203063270 203063667 -50192916 + MSTB LTR MaLR 1 426 0 644 230 24 6 chr2 203063794 203063959 -50192624 + L1M4 LINE L1 2187 2354 -3792 187 200 0 0 chr2 203064080 203064125 -50192458 + MIR SINE MIR 164 208 -54 505 284 59 87 chr2 203064280 203064671 -50191912 - MLT1I LTR MaLR -2 407 28 1030 147 6 0 chr2 203065477 203065634 -50190949 - Tigger3(Golem) DNA MER2_type -1 3028 2871 198 0 0 0 chr2 203065892 203065914 -50190669 + (TTCA)n Simple_repeat Simple_repeat 1 22 0 1686 86 9 0 chr2 203066036 203066257 -50190326 - AluY SINE Alu -6 305 83 21 0 0 0 chr2 203066425 203066446 -50190137 + AT_rich Low_complexity Low_complexity 1 21 0 321 301 77 13 chr2 203066650 203066806 -50189777 - MLT1L LTR MaLR -6 609 444 617 172 22 83 chr2 203066809 203066989 -50189594 + MER53 DNA DNA 5 173 -16 180 111 0 0 chr2 203069005 203069032 -50187551 + (A)n Simple_repeat Simple_repeat 1 27 0 350 57 19 0 chr2 203069735 203069788 -50186795 + (TG)n Simple_repeat Simple_repeat 2 55 0 1008 165 0 24 chr2 203070639 203070809 -50185774 + AluJb SINE Alu 136 301 -11 204 213 0 0 chr2 203070817 203070864 -50185719 + (TG)n Simple_repeat Simple_repeat 2 48 0 281 344 77 23 chr2 203071439 203071660 -50184923 + L2 LINE L2 2807 3039 -233 994 81 0 0 chr2 203071929 203072053 -50184530 - AluSg/x SINE Alu -11 299 176 3818 242 74 31 chr2 203073277 203074640 -50181943 + L1M4 LINE L1 2754 4183 -1963 1942 108 29 11 chr2 203074640 203074963 -50181620 + AluSx SINE Alu 1 328 0 3818 242 74 31 chr2 203074963 203075026 -50181557 + L1M4 LINE L1 4183 4242 -1904 1640 175 7 10 chr2 203075027 203075319 -50181264 + AluJb SINE Alu 1 291 -21 203 255 0 20 chr2 203075485 203075536 -50181047 + C-rich Low_complexity Low_complexity 2 51 0 12857 54 6 7 chr2 203075636 203077370 -50179213 - L1P LINE L1 -2429 3717 1921 3148 146 27 13 chr2 203077397 203077918 -50178665 + L1P LINE L1 11 538 -5608 29 28 0 0 chr2 203077923 203077959 -50178624 + AT_rich Low_complexity Low_complexity 1 36 0 235 265 0 0 chr2 203078539 203078588 -50177995 - L2 LINE L2 0 3313 3265 7433 133 38 20 chr2 203079503 203080774 -50175809 + HSMAR2 DNA Mariner 1 1293 -9 187 213 16 16 chr2 203080924 203080985 -50175598 + (TA)n Simple_repeat Simple_repeat 2 62 0 673 179 99 30 chr2 203081143 203081344 -50175239 + L1M4 LINE L1 4525 4739 -1407 1511 171 36 10 chr2 203081346 203081375 -50175208 - L1MA5A LINE L1 -250 6047 6019 524 295 67 30 chr2 203081375 203081647 -50174936 - L1PA7 LINE L1 -136 6018 5730 224 57 0 29 chr2 203081647 203081682 -50174901 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 524 295 67 30 chr2 203081682 203081738 -50174845 - L1PA7 LINE L1 -424 5730 5678 253 125 25 0 chr2 203081707 203081747 -50174836 + L1PA12 LINE L1 6112 6152 -16 * 853 239 14 0 chr2 203081974 203082187 -50174396 - L1MC4 LINE L1 -143 7899 7684 204 125 62 0 chr2 203082196 203082244 -50174339 + (TA)n Simple_repeat Simple_repeat 1 51 0 3183 34 0 0 chr2 203082683 203083064 -50173519 - L1P LINE L1 -1050 5096 4716 879 29 0 0 chr2 203083064 203083168 -50173415 + L1PA2 LINE L1 6051 6155 0 23 0 0 0 chr2 203083569 203083592 -50172991 + AT_rich Low_complexity Low_complexity 1 23 0 417 294 8 0 chr2 203084179 203084305 -50172278 + MER94 DNA DNA 6 132 -2 234 356 58 19 chr2 203084599 203084703 -50171880 + L2 LINE L2 2948 3055 -217 22 35 0 0 chr2 203085234 203085263 -50171320 + AT_rich Low_complexity Low_complexity 1 29 0 1631 299 148 35 chr2 203085404 203086465 -50170118 + L2 LINE L2 1997 3189 -124 23 0 0 0 chr2 203087024 203087047 -50169536 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr2 203088279 203088304 -50168279 + AT_rich Low_complexity Low_complexity 1 25 0 2206 114 0 0 chr2 203088311 203088619 -50167964 + AluSg SINE Alu 1 308 -2 2180 81 0 98 chr2 203090264 203090611 -50165972 + AluSq SINE Alu 1 313 0 221 265 0 0 chr2 203091349 203091398 -50165185 + T-rich Low_complexity Low_complexity 2 50 0 22 0 0 0 chr2 203091835 203091857 -50164726 + AT_rich Low_complexity Low_complexity 1 22 0 882 272 19 27 chr2 203093163 203093420 -50163163 + MIR SINE MIR 8 262 0 23 0 0 0 chr2 203095210 203095233 -50161350 + AT_rich Low_complexity Low_complexity 1 23 0 28 0 0 0 chr2 203095946 203095974 -50160609 + AT_rich Low_complexity Low_complexity 1 28 0 1872 176 23 26 chr2 203096600 203096630 -50159953 - L1MA8 LINE L1 -42 6249 6220 14081 145 28 4 chr2 203096630 203098991 -50157592 + Tigger1 DNA MER2_type 2 2418 0 1872 176 23 26 chr2 203098991 203099347 -50157236 - L1MA8 LINE L1 -71 6220 5864 2182 108 0 0 chr2 203100194 203100489 -50156094 + AluSg SINE Alu 3 297 -13 2514 102 21 16 chr2 203101284 203101657 -50154926 + THE1C LTR MaLR 1 375 0 27 29 0 0 chr2 203101963 203101997 -50154586 + AT_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr2 203102439 203102461 -50154122 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 203103167 203103188 -50153395 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr2 203105125 203105160 -50151423 + AT_rich Low_complexity Low_complexity 1 35 0 3671 58 31 4 chr2 203108093 203108580 -50148003 - L1PA7 LINE L1 -2 6152 5653 5528 90 18 0 chr2 203108580 203109446 -50147137 + L1P3 LINE L1 4599 5473 -699 22 56 0 0 chr2 203110220 203110256 -50146327 + AT_rich Low_complexity Low_complexity 1 36 0 720 298 95 25 chr2 203112297 203112613 -50143970 - L2 LINE L2 -20 3293 2956 268 286 33 0 chr2 203113024 203113115 -50143468 + L2 LINE L2 1483 1576 -1738 504 286 113 39 chr2 203113217 203113304 -50143279 + L2 LINE L2 1817 1896 -1418 1777 157 52 22 chr2 203113304 203113668 -50142915 - THE1C LTR MaLR 0 375 1 504 286 113 39 chr2 203113668 203113891 -50142692 + L2 LINE L2 1896 2150 -1164 251 344 95 38 chr2 203113891 203114153 -50142430 - LTR16A LTR ERVL 0 450 174 234 154 0 0 chr2 203114227 203114266 -50142317 - LTR16A LTR ERVL -411 39 1 327 358 40 0 chr2 203114375 203114526 -50142057 + L2 LINE L2 2326 2482 -832 8950 152 25 19 chr2 203114560 203118627 -50137956 - L1MA3 LINE L1 -1 7723 1110 2011 113 0 48 chr2 203118627 203118937 -50137646 - AluSg SINE Alu -11 299 5 8950 152 25 19 chr2 203118937 203120046 -50136537 - L1MA3 LINE L1 -6614 1110 9 240 318 75 28 chr2 203120046 203120153 -50136430 + L2 LINE L2 2454 2565 -749 506 298 90 0 chr2 203120160 203120348 -50136235 - LTR53 LTR ERVL -195 324 120 1045 328 28 24 chr2 203120527 203121170 -50135413 + L2 LINE L2 2668 3313 0 29 47 0 0 chr2 203121187 203121230 -50135353 + AT_rich Low_complexity Low_complexity 1 43 0 202 56 56 0 chr2 203122266 203122302 -50134281 + (TG)n Simple_repeat Simple_repeat 2 39 0 323 347 40 16 chr2 203122768 203122892 -50133691 + L2 LINE L2 3146 3272 0 380 240 70 0 chr2 203122901 203123001 -50133582 - MER119 DNA MER1_type 0 583 477 437 253 0 0 chr2 203123009 203123100 -50133483 - MLT1A2 LTR MaLR -283 91 1 299 269 87 29 chr2 203123104 203123208 -50133375 - MER119 DNA MER1_type -443 140 31 24 32 0 0 chr2 203125091 203125122 -50131461 + AT_rich Low_complexity Low_complexity 1 31 0 204 245 0 0 chr2 203125682 203125731 -50130852 + (TTA)n Simple_repeat Simple_repeat 1 49 0 2207 140 23 6 chr2 203125797 203126147 -50130436 + MLT1A1 LTR MaLR 10 365 0 2234 76 0 3 chr2 203126498 203126824 -50129759 - AluY SINE Alu 0 311 1 25 51 0 0 chr2 203127004 203127043 -50129540 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr2 203129616 203129637 -50126946 + AT_rich Low_complexity Low_complexity 1 21 0 200 200 0 0 chr2 203130051 203130086 -50126497 + (CATATA)n Simple_repeat Simple_repeat 5 39 0 240 114 0 0 chr2 203131263 203131298 -50125285 + MIR SINE MIR 215 249 -13 185 271 34 0 chr2 203131310 203131369 -50125214 + L2 LINE L2 2150 2210 -1104 1245 281 132 41 chr2 203131382 203131990 -50124593 - L2 LINE L2 -768 2546 1884 439 319 76 17 chr2 203131999 203132118 -50124465 - MER91A DNA MER1_type -10 186 61 266 343 40 25 chr2 203132167 203132368 -50124215 - L2 LINE L2 -1425 1889 1686 508 290 145 18 chr2 203132637 203132968 -50123615 + MERVL LTR ERVL 2487 2859 -2626 214 333 90 35 chr2 203134772 203134916 -50121667 + MIR SINE MIR 9 160 -102 408 254 321 0 chr2 203134918 203135052 -50121531 + L1MC/D LINE L1 5479 5655 -2153 8072 205 75 42 chr2 203135095 203135395 -50121188 - L1MC3 LINE L1 -311 7474 7185 267 296 12 0 chr2 203135395 203135476 -50121107 - MLT1F1 LTR MaLR -456 111 30 8072 205 75 42 chr2 203135476 203135694 -50120889 - L1MC3 LINE L1 -600 7185 6976 245 95 0 24 chr2 203135694 203135736 -50120847 + (TG)n Simple_repeat Simple_repeat 2 42 0 8072 205 75 42 chr2 203135736 203136932 -50119651 - L1MC3 LINE L1 -809 6976 5585 2434 61 0 6 chr2 203136932 203137244 -50119339 - AluY SINE Alu -1 310 1 8072 205 75 42 chr2 203137244 203137706 -50118877 - L1MC3 LINE L1 -2200 5585 5140 330 293 57 7 chr2 203137830 203137970 -50118613 - L1MC3 LINE L1 -1922 4224 4078 432 0 0 0 chr2 203138724 203138772 -50117811 + (TG)n Simple_repeat Simple_repeat 2 49 0 1540 160 40 126 chr2 203138821 203139272 -50117311 + MLT2D LTR ERVL 1 412 -2 210 291 0 0 chr2 203140714 203140769 -50115814 + MIR3 SINE MIR 150 204 -4 217 331 181 0 chr2 203140834 203140961 -50115622 + MIR SINE MIR 61 210 -52 1506 131 9 5 chr2 203140982 203141204 -50115379 + AluSx SINE Alu 3 225 -87 237 33 0 0 chr2 203141372 203141402 -50115181 + (TC)n Simple_repeat Simple_repeat 1 30 0 542 286 95 6 chr2 203142200 203142368 -50114215 - MIR SINE MIR -71 191 9 1607 242 33 29 chr2 203142611 203143062 -50113521 + L1MCa LINE L1 159 611 -5953 2484 168 18 7 chr2 203143062 203143508 -50113075 + MER49 LTR ERV1 1 451 -472 297 183 0 42 chr2 203143550 203143621 -50112962 + MER49 LTR ERV1 450 517 -406 496 213 0 0 chr2 203143621 203143715 -50112868 + L1MCa LINE L1 107 200 -6226 1832 182 50 22 chr2 203143715 203144117 -50112466 + MER49 LTR ERV1 511 923 0 438 217 122 0 chr2 203144125 203144164 -50112419 + L1MCa LINE L1 615 648 -5916 378 0 0 0 chr2 203144164 203144206 -50112377 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 438 217 122 0 chr2 203144206 203144281 -50112302 + L1MCa LINE L1 648 743 -5821 937 158 29 125 chr2 203144290 203144620 -50111963 + L1MA7 LINE L1 5398 5670 -630 3147 171 67 2 chr2 203144620 203145186 -50111397 + MER6A DNA MER2_type 1 603 -2 969 119 145 19 chr2 203145188 203145397 -50111186 + L1MA7 LINE L1 5669 5903 -263 480 269 13 0 chr2 203145425 203145641 -50110942 + L1MCa LINE L1 639 919 -5126 424 226 38 12 chr2 203145647 203145790 -50110793 + L1MCa LINE L1 2516 2657 -3907 368 240 115 83 chr2 203145921 203146113 -50110470 - MLT1K LTR MaLR -24 564 367 1495 210 118 72 chr2 203147412 203147997 -50108586 - LTR9 LTR ERV1 0 612 1 185 95 0 71 chr2 203149999 203150041 -50106542 + (TG)n Simple_repeat Simple_repeat 2 40 0 1933 185 8 8 chr2 203150202 203150558 -50106025 - MLT1A1 LTR MaLR 0 365 10 248 266 21 32 chr2 203150804 203150898 -50105685 + MLT1J1 LTR MaLR 353 445 -1 1631 192 29 19 chr2 203151731 203152038 -50104545 - AluJb SINE Alu -1 311 2 2016 109 16 36 chr2 203152724 203153028 -50103555 + AluSx SINE Alu 1 298 -14 2163 104 3 3 chr2 203153521 203153820 -50102763 - AluSg SINE Alu -11 299 1 1954 137 3 7 chr2 203154540 203154855 -50101728 + AluSx SINE Alu 3 312 0 21 57 0 0 chr2 203155203 203155238 -50101345 + AT_rich Low_complexity Low_complexity 1 35 0 181 349 15 0 chr2 203155488 203155554 -50101029 - L2 LINE L2 0 3313 3247 * 226 270 32 16 chr2 203155536 203155599 -50100984 + MIR3 SINE MIR 129 192 -16 26 0 0 0 chr2 203156132 203156158 -50100425 + AT_rich Low_complexity Low_complexity 1 26 0 27 29 0 0 chr2 203156621 203156655 -50099928 + AT_rich Low_complexity Low_complexity 1 34 0 22 70 0 0 chr2 203156690 203156733 -50099850 + AT_rich Low_complexity Low_complexity 1 43 0 772 250 78 94 chr2 203157812 203158555 -50098028 + MER21B LTR ERV1 6 706 -38 307 193 57 80 chr2 203158638 203158726 -50097857 - MER20 DNA MER1_type 0 219 134 23 54 0 0 chr2 203159235 203159272 -50097311 + AT_rich Low_complexity Low_complexity 1 37 0 1617 145 150 44 chr2 203159395 203159782 -50096801 - MSTA LTR MaLR 0 428 1 3264 183 28 64 chr2 203160095 203160889 -50095694 + L1MC3 LINE L1 6379 7143 -642 4947 119 10 5 chr2 203161365 203162130 -50094453 - L1PA7 LINE L1 -3197 2949 2180 17186 84 1 6 chr2 203162130 203165333 -50091250 + L1PA7 LINE L1 2952 6154 0 321 281 30 7 chr2 203165366 203165501 -50091082 + (CATATA)n Simple_repeat Simple_repeat 6 143 0 2170 99 0 0 chr2 203165620 203165938 -50090645 - AluSq SINE Alu 0 318 1 21 36 0 0 chr2 203165938 203165966 -50090617 + AT_rich Low_complexity Low_complexity 1 28 0 414 0 0 0 chr2 203166421 203166467 -50090116 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 943 0 0 0 chr2 203166467 203166570 -50090013 - L1PA3 LINE L1 -16 6139 6037 234 97 0 0 chr2 203166571 203166602 -50089981 + L1P LINE L1 98 128 -6018 328 49 0 0 chr2 203168887 203168928 -50087655 + (TTC)n Simple_repeat Simple_repeat 2 180 0 1554 211 0 3 chr2 203168928 203169213 -50087370 - AluJo SINE Alu -28 284 1 261 0 21 64 chr2 203169377 203169424 -50087159 + (CATATA)n Simple_repeat Simple_repeat 1 45 0 244 196 20 0 chr2 203169589 203169640 -50086943 - L1ME LINE L1 -313 5808 5757 311 261 63 3 chr2 203169742 203169935 -50086648 - L1ME LINE L1 -555 5566 5363 204 225 34 34 chr2 203169972 203170061 -50086522 + T-rich Low_complexity Low_complexity 2 90 0 292 293 36 14 chr2 203171406 203171546 -50085037 + (CATA)n Simple_repeat Simple_repeat 4 146 0 777 250 101 67 chr2 203171648 203172303 -50084280 + L1MC5 LINE L1 7249 7925 -36 21 57 0 0 chr2 203172710 203172745 -50083838 + AT_rich Low_complexity Low_complexity 1 35 0 27 0 0 0 chr2 203173551 203173578 -50083005 + AT_rich Low_complexity Low_complexity 1 27 0 1881 248 90 8 chr2 203173578 203173664 -50082919 + L1M4 LINE L1 4156 4234 -1912 363 44 0 0 chr2 203173664 203173709 -50082874 + (CA)n Simple_repeat Simple_repeat 2 46 0 1881 248 90 8 chr2 203173709 203173968 -50082615 + L1M4 LINE L1 4234 4470 -1676 1908 112 3 58 chr2 203173968 203174292 -50082291 - AluSc SINE Alu 0 308 1 1881 248 90 8 chr2 203174292 203174674 -50081909 + L1M4 LINE L1 4470 4945 -1201 330 26 0 0 chr2 203175045 203175084 -50081499 + (TCCA)n Simple_repeat Simple_repeat 4 42 0 325 269 157 0 chr2 203175155 203175263 -50081320 + L2 LINE L2 3188 3312 -1 379 306 106 15 chr2 203175268 203175467 -50081116 - MIR SINE MIR -9 253 37 2288 53 0 27 chr2 203175878 203176178 -50080405 + AluY SINE Alu 1 292 -19 326 316 103 22 chr2 203176467 203176603 -50079980 - L3b LINE CR1 -2 1581 1435 21009 37 3 3 chr2 203177614 203180224 -50076359 - L1PA4 LINE L1 -865 5281 2671 7196 40 0 1 chr2 203180227 203181106 -50075477 + L1PA4 LINE L1 5278 6155 0 363 336 30 22 chr2 203181275 203181409 -50075174 + Charlie8 DNA MER1_type 23 157 -2260 972 190 61 41 chr2 203181598 203181933 -50074650 + MLT1A1 LTR MaLR 1 365 0 6761 157 24 7 chr2 203184312 203185522 -50071061 + Tigger3b DNA MER2_type 1 1231 0 898 149 43 16 chr2 203185608 203185796 -50070787 - L1MD3 LINE L1 -16 7979 7787 259 253 46 0 chr2 203185860 203185947 -50070636 + (CATATA)n Simple_repeat Simple_repeat 5 95 0 326 269 47 88 chr2 203186643 203186777 -50069806 + MIR SINE MIR 48 186 -76 2014 140 79 15 chr2 203186777 203187119 -50069464 - THE1B LTR MaLR 0 364 1 11287 98 13 2 chr2 203187119 203188682 -50067901 - THE1B-int LTR MaLR 0 1580 1 1955 153 73 15 chr2 203188686 203189026 -50067557 - THE1B LTR MaLR -4 360 1 326 269 47 88 chr2 203189026 203189078 -50067505 + MIR SINE MIR 188 232 -30 13594 152 27 15 chr2 203192307 203192510 -50064073 + Tigger1 DNA MER2_type 1 200 -2218 2168 127 0 9 chr2 203192510 203192826 -50063757 - AluSp SINE Alu 0 313 1 13594 152 27 15 chr2 203192826 203194977 -50061606 + Tigger1 DNA MER2_type 200 2384 -34 198 91 0 0 chr2 203195228 203195261 -50061322 + (TA)n Simple_repeat Simple_repeat 1 33 0 7664 26 0 0 chr2 203196055 203197423 -50059160 - L1PA3 LINE L1 -3 6152 4785 6128 34 1 0 chr2 203197423 203198160 -50058423 + L1PA3 LINE L1 4054 4791 -1355 622 257 102 89 chr2 203199582 203199966 -50056617 - MER77 LTR ERV1 -6 599 243 180 0 0 0 chr2 203199966 203199986 -50056597 + (ATTG)n Simple_repeat Simple_repeat 3 22 0 622 257 102 89 chr2 203199986 203200096 -50056487 - MER77 LTR ERV1 -362 243 136 246 260 170 30 chr2 203200125 203200225 -50056358 - MER77 LTR ERV1 -439 166 53 2184 98 0 0 chr2 203200300 203200576 -50056007 + AluSp SINE Alu 1 276 -37 1149 76 0 24 chr2 203200577 203200788 -50055795 + (GAAA)n Simple_repeat Simple_repeat 1 206 0 531 195 0 0 chr2 203200789 203200902 -50055681 + GA-rich Low_complexity Low_complexity 3 115 0 1860 148 70 20 chr2 203201199 203201556 -50055027 - THE1C LTR MaLR 0 375 1 10140 119 34 8 chr2 203201556 203203097 -50053486 - THE1C-int LTR MaLR 0 1580 1 1808 161 77 14 chr2 203203097 203203450 -50053133 - THE1C LTR MaLR 0 375 1 1342 187 3 75 chr2 203203608 203203863 -50052720 - MER77-int LTR ERV1 -61 4130 3899 2186 138 0 0 chr2 203203863 203204168 -50052415 - AluSx SINE Alu -7 305 1 1342 187 3 75 chr2 203204168 203204217 -50052366 - MER77-int LTR ERV1 -292 3899 3848 226 150 0 0 chr2 203204483 203204523 -50052060 + MADE1 DNA Mariner 1 40 -40 470 305 64 22 chr2 203204698 203205200 -50051383 - L1M4 LINE L1 -743 5403 4881 425 294 76 34 chr2 203205225 203205463 -50051120 - L1M4 LINE L1 -2223 3923 3676 556 83 36 0 chr2 203205540 203205624 -50050959 + L1 LINE L1 4545 4631 -1515 563 324 58 29 chr2 203205636 203205914 -50050669 + L1M2 LINE L1 136 421 -6428 396 343 191 49 chr2 203206089 203206413 -50050170 + L1M2 LINE L1 445 814 -6035 443 308 103 58 chr2 203206567 203206791 -50049792 + L1M2 LINE L1 668 901 -5948 551 277 25 126 chr2 203206806 203207091 -50049492 + L1M2 LINE L1 793 1048 -5801 6929 224 37 14 chr2 203207433 203209129 -50047454 + L1PA15-16 LINE L1 1268 3004 -3845 5598 173 35 31 chr2 203209113 203210631 -50045952 + L1MA4 LINE L1 4784 6300 0 * 245 215 15 0 chr2 203213933 203213998 -50042585 + (TA)n Simple_repeat Simple_repeat 1 66 0 371 214 27 62 chr2 203214869 203214981 -50041602 + MER63 DNA MER1_type 12 745 -317 216 0 0 0 chr2 203215915 203215939 -50040644 + (T)n Simple_repeat Simple_repeat 1 24 0 317 280 24 0 chr2 203216514 203216639 -50039944 + MER103 DNA DNA 32 159 -7 5362 178 30 29 chr2 203217371 203218193 -50038390 - L1PA15 LINE L1 0 6165 5346 2388 111 33 14 chr2 203218193 203218561 -50038022 + THE1C LTR MaLR 1 375 0 5362 178 30 29 chr2 203218561 203219509 -50037074 - L1PA15 LINE L1 -819 5346 4388 273 29 0 0 chr2 203219509 203219543 -50037040 + (TG)n Simple_repeat Simple_repeat 2 35 0 5362 178 30 29 chr2 203219543 203219762 -50036821 - L1PA15 LINE L1 -1777 4388 4171 228 295 16 0 chr2 203220516 203220577 -50036006 - Charlie8 DNA MER1_type -2355 62 1 208 331 87 8 chr2 203220640 203220767 -50035816 - MIR SINE MIR 0 262 126 25 0 0 0 chr2 203221445 203221470 -50035113 + AT_rich Low_complexity Low_complexity 1 25 0 203 323 127 57 chr2 203222278 203222436 -50034147 + L2 LINE L2 331 499 -2815 182 385 58 51 chr2 203223035 203223310 -50033273 + L2 LINE L2 2995 3271 -1 4102 175 24 6 chr2 203223377 203224179 -50032404 - L1MC2 LINE L1 -11 6333 5518 323 301 35 58 chr2 203224750 203224923 -50031660 + MIR3 SINE MIR 1 169 -39 362 329 77 49 chr2 203224939 203225289 -50031294 - L2 LINE L2 -31 3282 2923 199 317 17 0 chr2 203225944 203226004 -50030579 - MIR SINE MIR -115 147 87 2085 183 51 73 chr2 203228745 203229237 -50027346 + MER67D LTR ERV1 1 481 -33 21 0 0 0 chr2 203231012 203231033 -50025550 + AT_rich Low_complexity Low_complexity 1 21 0 195 129 0 0 chr2 203233048 203233079 -50023504 + (TTTC)n Simple_repeat Simple_repeat 3 33 0 466 273 39 8 chr2 203233082 203233210 -50023373 - L2 LINE L2 -5 3267 3136 590 216 88 18 chr2 203233225 203233396 -50023187 + MIR SINE MIR 80 262 0 226 100 100 0 chr2 203233443 203233483 -50023100 - MER116 DNA Mariner -3 77 34 396 194 24 199 chr2 203233509 203233720 -50022863 + MER5B DNA MER1_type 2 175 -3 290 310 120 45 chr2 203234449 203234649 -50021934 + L3 LINE CR1 566 780 -797 21 0 0 0 chr2 203234678 203234699 -50021884 + AT_rich Low_complexity Low_complexity 1 21 0 221 350 12 0 chr2 203235022 203235102 -50021481 + L3 LINE CR1 1230 1310 -267 180 305 37 24 chr2 203235543 203235625 -50020958 + MIR3 SINE MIR 125 207 -1 368 249 104 64 chr2 203235686 203235859 -50020724 - HsTC2 DNA Tc2 -1228 670 491 3146 163 45 42 chr2 203236136 203236805 -50019778 - L1MA10 LINE L1 0 6334 5664 28 29 0 0 chr2 203237163 203237198 -50019385 + AT_rich Low_complexity Low_complexity 1 35 0 206 274 11 53 chr2 203237816 203237911 -50018672 + A-rich Low_complexity Low_complexity 4 94 0 23 0 0 0 chr2 203237991 203238014 -50018569 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr2 203238535 203238561 -50018022 + AT_rich Low_complexity Low_complexity 1 26 0 45 69 0 0 chr2 203239271 203239358 -50017225 + AT_rich Low_complexity Low_complexity 1 87 0 649 318 211 22 chr2 203240502 203241535 -50015048 - L2 LINE L2 -95 3218 1977 318 316 44 22 chr2 203241747 203241883 -50014700 + L1ME LINE L1 5492 5630 -491 550 320 23 6 chr2 203241957 203242129 -50014454 - MIR SINE MIR -65 197 23 411 21 0 0 chr2 203242268 203242316 -50014267 + (CA)n Simple_repeat Simple_repeat 1 48 0 208 316 101 44 chr2 203242777 203242935 -50013648 - L2 LINE L2 -165 3107 2941 180 328 56 48 chr2 203243491 203243616 -50012967 - MIR SINE MIR -56 206 81 182 201 39 7 chr2 203243729 203243883 -50012700 + (TA)n Simple_repeat Simple_repeat 1 159 0 303 269 59 0 chr2 203245158 203245277 -50011306 + MER103 DNA DNA 39 164 -2 243 96 58 0 chr2 203245666 203245718 -50010865 + (TA)n Simple_repeat Simple_repeat 1 55 0 512 318 97 4 chr2 203247144 203247402 -50009181 - L2 LINE L2 -148 3165 2884 1356 208 59 94 chr2 203247542 203247705 -50008878 + MLT1C LTR MaLR 6 173 -294 3860 138 53 11 chr2 203247705 203248401 -50008182 + L1MA8 LINE L1 5564 6288 -3 1356 208 59 94 chr2 203248401 203248713 -50007870 + MLT1C LTR MaLR 173 464 -3 21 71 0 0 chr2 203253253 203253295 -50003288 + AT_rich Low_complexity Low_complexity 1 42 0 2126 117 7 3 chr2 203253297 203253594 -50002989 + AluSc SINE Alu 1 301 -8 336 48 0 0 chr2 203253594 203253636 -50002947 + (GGAA)n Simple_repeat Simple_repeat 3 44 0 326 332 35 60 chr2 203254248 203254480 -50002103 + MIR SINE MIR 15 240 -22 560 289 47 30 chr2 203254677 203254909 -50001674 - MIR SINE MIR -1 261 26 2449 36 0 0 chr2 203254973 203255254 -50001329 + AluY SINE Alu 14 294 -17 237 304 174 31 chr2 203255931 203256092 -50000491 + MIR SINE MIR 64 247 -15 613 304 116 32 chr2 203259330 203259803 -49996780 + HAL1 LINE L1 326 838 -1669 435 305 70 23 chr2 203259879 203260138 -49996445 + MLT1I LTR MaLR 106 376 -33 385 302 43 52 chr2 203260181 203260413 -49996170 + HAL1 LINE L1 921 1150 -1357 21 36 0 0 chr2 203260459 203260487 -49996096 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr2 203260523 203260558 -49996025 + AT_rich Low_complexity Low_complexity 1 35 0 34 55 0 0 chr2 203260628 203260683 -49995900 + AT_rich Low_complexity Low_complexity 1 55 0 27 62 0 0 chr2 203261611 203261659 -49994924 + AT_rich Low_complexity Low_complexity 1 48 0 197 338 95 14 chr2 203261810 203261958 -49994625 - L2 LINE L2 -982 2332 2173 198 376 11 0 chr2 203262115 203262208 -49994375 + MIR3 SINE MIR 76 169 -39 21 36 0 0 chr2 203262482 203262510 -49994073 + AT_rich Low_complexity Low_complexity 1 28 0 601 13 26 0 chr2 203262699 203262777 -49993806 + (TAGA)n Simple_repeat Simple_repeat 4 83 0 230 255 20 20 chr2 203263627 203263725 -49992858 - L1MC4 LINE L1 -25 8017 7920 3423 241 90 14 chr2 203263813 203264884 -49991699 - L1MC4 LINE L1 -130 7912 6761 302 248 18 46 chr2 203264942 203265051 -49991532 - L1MC4 LINE L1 -1545 6497 6392 736 259 82 37 chr2 203265082 203265437 -49991146 - L1ME2 LINE L1 -20 6144 5774 477 315 31 6 chr2 203265712 203265874 -49990709 + MIR SINE MIR 29 194 -68 211 100 0 40 chr2 203265976 203266026 -49990557 + (TTTTG)n Simple_repeat Simple_repeat 3 50 0 2057 133 26 32 chr2 203266312 203266689 -49989894 - THE1C LTR MaLR 0 375 1 2937 262 53 21 chr2 203268882 203270266 -49986317 + L1ME LINE L1 4165 5589 -573 4964 117 16 20 chr2 203270267 203270685 -49985898 + L1PB4 LINE L1 5362 5777 -379 291 28 0 0 chr2 203270685 203270721 -49985862 + (TG)n Simple_repeat Simple_repeat 2 37 0 4964 117 16 20 chr2 203270721 203271100 -49985483 + L1PB4 LINE L1 5777 6156 0 406 243 19 0 chr2 203271103 203271206 -49985377 + L1ME LINE L1 5597 5701 -465 295 324 43 43 chr2 203271373 203271580 -49985003 + MER89-int LTR ERV1 3753 3959 -2842 1077 186 77 17 chr2 203271630 203271916 -49984667 - MER33 DNA MER1_type -29 295 1 2569 298 65 74 chr2 203272350 203274228 -49982355 + MER89-int LTR ERV1 2604 4464 -183 1981 187 55 19 chr2 203274229 203274646 -49981937 + MSTB1 LTR MaLR 1 432 0 300 168 0 42 chr2 203275430 203275525 -49981058 + (CATA)n Simple_repeat Simple_repeat 4 94 0 1397 195 61 3 chr2 203276583 203276880 -49979703 + Charlie1 DNA MER1_type 1835 2148 -613 836 175 22 60 chr2 203276881 203277064 -49979519 + AluJo SINE Alu 117 292 -20 739 197 173 5 chr2 203277072 203277280 -49979303 + Charlie1 DNA MER1_type 2187 2429 -332 900 244 53 66 chr2 203277281 203277600 -49978983 - MLT1E LTR MaLR -211 443 8 338 313 12 0 chr2 203278436 203278516 -49978067 + L2 LINE L2 3232 3312 -1 232 245 0 0 chr2 203280053 203280102 -49976481 - L2 LINE L2 -3 3269 3221 226 303 66 71 chr2 203280995 203281206 -49975377 - MLT1I LTR MaLR -135 274 65 261 0 0 0 chr2 203281239 203281268 -49975315 + (A)n Simple_repeat Simple_repeat 1 29 0 180 0 0 0 chr2 203281268 203281288 -49975295 + (TA)n Simple_repeat Simple_repeat 2 21 0 1243 147 0 5 chr2 203281694 203281884 -49974699 - AluSg/x SINE Alu -25 287 99 1105 247 42 65 chr2 203281885 203282286 -49974297 - L1MCb LINE L1 -5641 404 13 24 0 0 0 chr2 203282326 203282350 -49974233 + AT_rich Low_complexity Low_complexity 1 24 0 226 312 275 0 chr2 203282777 203282915 -49973668 + MER5A DNA MER1_type 3 178 -11 301 200 186 0 chr2 203282942 203283012 -49973571 + MER5A DNA MER1_type 107 189 0 6613 30 0 0 chr2 203286093 203286889 -49969694 - L1PA2 LINE L1 -935 5211 4416 7752 13 8 0 chr2 203286889 203287819 -49968764 + L1PA2 LINE L1 5219 6155 0 251 213 0 0 chr2 203287823 203287884 -49968699 + A-rich Low_complexity Low_complexity 1 61 0 558 286 77 64 chr2 203288114 203288554 -49968029 - L1M4 LINE L1 -2961 3185 2740 22 0 0 0 chr2 203288926 203288948 -49967635 + AT_rich Low_complexity Low_complexity 1 22 0 695 290 119 40 chr2 203289208 203289705 -49966878 - HAL1b LINE L1 -518 830 295 51 31 0 0 chr2 203289789 203289854 -49966729 + AT_rich Low_complexity Low_complexity 1 65 0 308 116 0 0 chr2 203290176 203290219 -49966364 + MER57B LTR ERV1 3 45 -389 42661 34 21 0 chr2 203290223 203296245 -49960338 - L1PA2 LINE L1 0 6155 1 2404 155 10 12 chr2 203296246 203296652 -49959931 + MER57B LTR ERV1 30 434 0 32923 86 20 7 chr2 203296940 203302481 -49954102 + L1PA6 LINE L1 542 6152 -2 21 57 0 0 chr2 203307329 203307364 -49949219 + AT_rich Low_complexity Low_complexity 1 35 0 268 315 199 22 chr2 203309097 203309640 -49946943 + L2 LINE L2 1696 2334 -980 2027 95 23 33 chr2 203309878 203310183 -49946400 - AluSp SINE Alu -11 302 1 7161 51 2 0 chr2 203310591 203312195 -49944388 + L1PA5 LINE L1 4550 6154 0 413 204 47 57 chr2 203312214 203312425 -49944158 - Charlie7 DNA MER1_type -131 2481 2273 219 262 215 9 chr2 203313063 203313170 -49943413 - L2 LINE L2 -4 3309 3181 972 141 61 25 chr2 203313300 203313463 -49943120 - THE1B LTR MaLR 0 364 196 212 360 137 20 chr2 203314375 203314675 -49941908 - L2 LINE L2 -2414 900 566 273 243 0 0 chr2 203314686 203314756 -49941827 + (CATATA)n Simple_repeat Simple_repeat 2 71 0 220 392 138 4 chr2 203314790 203315030 -49941553 - L2 LINE L2 -2833 481 210 231 36 0 0 chr2 203315333 203315361 -49941222 + (A)n Simple_repeat Simple_repeat 1 28 0 28 29 0 0 chr2 203315430 203315465 -49941118 + AT_rich Low_complexity Low_complexity 1 35 0 877 240 112 53 chr2 203316181 203316528 -49940055 + MLT1J LTR MaLR 40 440 -71 6666 198 60 23 chr2 203316931 203319467 -49937116 + L1M3f LINE L1 12 2649 -3679 1801 177 3 3 chr2 203319467 203319772 -49936811 + AluSx SINE Alu 1 305 -7 6666 198 60 23 chr2 203319772 203320154 -49936429 + L1M3f LINE L1 2649 3015 -3313 7059 165 43 29 chr2 203320154 203320997 -49935586 + L1PA16 LINE L1 3703 4533 -1633 807 201 0 0 chr2 203320997 203321151 -49935432 + L1PA16 LINE L1 5997 6150 -16 7059 165 43 29 chr2 203321151 203322505 -49934078 + L1PA16 LINE L1 4533 5922 -244 406 121 0 0 chr2 203322562 203322628 -49933955 + L1PA16 LINE L1 6085 6150 -16 2340 200 19 13 chr2 203322628 203323144 -49933439 + L1MA4 LINE L1 5768 6295 -5 241 182 0 0 chr2 203323180 203323224 -49933359 + LTR67 LTR ERVL 110 153 -404 236 180 0 20 chr2 203323184 203323234 -49933349 + MLT1J2 LTR MaLR 72 120 -330 * 413 276 48 37 chr2 203323355 203323526 -49933057 + LTR16A LTR ERVL 70 245 -212 216 0 0 0 chr2 203323615 203323639 -49932944 + (TC)n Simple_repeat Simple_repeat 1 24 0 467 17 17 0 chr2 203323651 203323711 -49932872 + (TG)n Simple_repeat Simple_repeat 2 62 0 260 154 19 0 chr2 203323743 203323795 -49932788 + (CATA)n Simple_repeat Simple_repeat 2 54 0 7004 154 52 8 chr2 203324185 203325367 -49931216 + THE1C-int LTR MaLR 347 1580 0 1015 193 112 23 chr2 203325367 203325626 -49930957 + THE1C LTR MaLR 1 282 -93 987 204 9 23 chr2 203325595 203325816 -49930767 + THE1C LTR MaLR 158 375 0 * 234 264 19 0 chr2 203325882 203325935 -49930648 - 7SK RNA RNA -95 98 45 318 319 0 35 chr2 203327535 203327651 -49928932 - MIR SINE MIR -95 167 56 572 193 175 48 chr2 203329242 203329470 -49927113 - MIR SINE MIR -1 261 5 938 104 7 0 chr2 203330329 203330483 -49926100 + (TA)n Simple_repeat Simple_repeat 1 155 0 1947 110 11 11 chr2 203330483 203330764 -49925819 - AluSg SINE Alu -29 281 1 282 193 0 0 chr2 203331442 203331499 -49925084 + (CATA)n Simple_repeat Simple_repeat 2 58 0 189 0 0 0 chr2 203331516 203331537 -49925046 + (CA)n Simple_repeat Simple_repeat 2 22 0 221 246 0 29 chr2 203332646 203332715 -49923868 + GA-rich Low_complexity Low_complexity 3 69 0 431 251 35 62 chr2 203332982 203333189 -49923394 - L1ME3 LINE L1 -136 6028 5815 524 296 130 20 chr2 203333266 203333513 -49923070 + LTR16A1 LTR ERVL 168 441 -16 207 372 0 0 chr2 203334126 203334204 -49922379 - L2 LINE L2 -1639 1675 1598 398 131 0 0 chr2 203334317 203334378 -49922205 + L1PA11 LINE L1 6113 6173 -1 182 221 29 73 chr2 203334867 203334935 -49921648 + L2 LINE L2 607 671 -2643 8486 185 29 67 chr2 203335445 203337133 -49919450 + L1PA15 LINE L1 3677 5299 -866 1598 187 0 20 chr2 203337133 203337438 -49919145 + AluJb SINE Alu 1 299 -13 8486 185 29 67 chr2 203337438 203338270 -49918313 + L1PA15 LINE L1 5299 6161 -4 360 331 61 17 chr2 203338348 203338529 -49918054 + MIR SINE MIR 48 236 -26 288 301 165 0 chr2 203339022 203339125 -49917458 + L2 LINE L2 3192 3311 -2 384 269 66 44 chr2 203339747 203339929 -49916654 - MIR SINE MIR -71 191 6 4222 106 11 59 chr2 203340206 203340968 -49915615 + L1M1 LINE L1 2433 3157 -4408 1486 96 35 0 chr2 203340968 203341197 -49915386 - L1M1 LINE L1 -4853 2712 2476 911 100 27 0 chr2 203341194 203341344 -49915239 + L1M1 LINE L1 3069 3222 -4343 * 1814 124 4 0 chr2 203341344 203341603 -49914980 + MLT2A2 LTR ERVL 1 260 -193 1504 229 9 16 chr2 203341650 203342087 -49914496 + L1M1 LINE L1 4160 4593 -2972 26 30 0 0 chr2 203342702 203342735 -49913848 + AT_rich Low_complexity Low_complexity 1 33 0 1209 135 0 36 chr2 203342863 203343085 -49913498 - L1PB1 LINE L1 -1 6150 5937 1979 181 20 6 chr2 203343200 203343543 -49913040 + MLT1A1 LTR MaLR 18 365 0 1760 169 46 27 chr2 203343832 203344200 -49912383 + THE1C LTR MaLR 1 375 0 4282 152 66 67 chr2 203344200 203345054 -49911529 + THE1C-int LTR MaLR 1 853 -727 1043 109 6 0 chr2 203345814 203345988 -49910595 + (TA)n Simple_repeat Simple_repeat 1 175 0 1965 107 11 11 chr2 203345988 203346269 -49910314 - AluSg SINE Alu -29 281 1 29 28 0 0 chr2 203347128 203347164 -49909419 + AT_rich Low_complexity Low_complexity 1 36 0 216 427 43 0 chr2 203347877 203347994 -49908589 - MER91C DNA MER1_type -18 122 1 318 293 19 9 chr2 203348232 203348338 -49908245 - MLT1K LTR MaLR -335 253 147 6331 178 59 98 chr2 203350138 203351965 -49904618 - MER52A LTR ERV1 0 1755 1 242 349 0 0 chr2 203352002 203352065 -49904518 - L2 LINE L2 -4 3268 3206 884 217 201 16 chr2 203352238 203352482 -49904101 + AluSc SINE Alu 2 290 -9 219 188 0 0 chr2 203353813 203353861 -49902722 + (CA)n Simple_repeat Simple_repeat 1 48 0 303 153 17 0 chr2 203354599 203354658 -49901925 + L1PA8 LINE L1 6104 6163 -9 381 186 168 35 chr2 203355863 203355976 -49900607 + L2 LINE L2 3186 3313 0 1699 185 16 21 chr2 203357222 203357605 -49898978 - L1MB1 LINE L1 -3 6165 5785 313 333 20 7 chr2 203357904 203358051 -49898532 - L1MC4a LINE L1 -1911 5897 5749 891 256 60 4 chr2 203358417 203358651 -49897932 + MER90 LTR ERV1 329 575 0 1303 222 55 0 chr2 203358847 203359159 -49897424 + L1MD2 LINE L1 6005 6335 -24 241 309 53 20 chr2 203359165 203359317 -49897266 + L1M4 LINE L1 4685 4841 -1305 204 316 116 0 chr2 203360206 203360301 -49896282 - MER5A DNA MER1_type 0 189 84 380 279 35 0 chr2 203360580 203360732 -49895851 + MIR SINE MIR 105 262 0 648 284 76 5 chr2 203362037 203362234 -49894349 - MIR SINE MIR -47 215 5 806 256 10 24 chr2 203362376 203362686 -49893897 + LTR16A LTR ERVL 92 430 -20 292 100 0 0 chr2 203362687 203362727 -49893856 + LTR16A LTR ERVL 394 433 -17 503 252 32 26 chr2 203362850 203363005 -49893578 - LTR67 LTR ERVL -13 544 389 21 36 0 0 chr2 203363887 203363915 -49892668 + AT_rich Low_complexity Low_complexity 1 28 0 24 53 0 0 chr2 203364965 203365003 -49891580 + AT_rich Low_complexity Low_complexity 1 38 0 381 304 37 7 chr2 203365308 203365443 -49891140 + MIR SINE MIR 51 189 -73 25 51 0 0 chr2 203365787 203365826 -49890757 + AT_rich Low_complexity Low_complexity 1 39 0 26 0 0 0 chr2 203367174 203367200 -49889383 + AT_rich Low_complexity Low_complexity 1 26 0 3788 130 9 92 chr2 203367266 203368019 -49888564 - LTR8 LTR ERV1 0 691 1 268 349 55 32 chr2 203368062 203368280 -49888303 + L2 LINE L2 2191 2413 -901 232 309 14 72 chr2 203368594 203368733 -49887850 - LTR28 LTR ERV1 -42 978 848 824 276 82 50 chr2 203368759 203369197 -49887386 - LTR1B LTR ERV1 -328 498 47 291 54 0 0 chr2 203369210 203369247 -49887336 + (TTA)n Simple_repeat Simple_repeat 2 38 0 1649 159 112 61 chr2 203369355 203369764 -49886819 + LTR47A LTR ERVL 3 436 -16 1965 140 72 29 chr2 203369764 203370113 -49886470 + THE1B LTR MaLR 1 364 0 1649 159 112 61 chr2 203370113 203370131 -49886452 + LTR47A LTR ERVL 436 452 0 23 0 0 0 chr2 203370539 203370562 -49886021 + AT_rich Low_complexity Low_complexity 1 23 0 2939 196 50 13 chr2 203370577 203371193 -49885390 + MER67C LTR ERV1 1 639 -71 425 165 13 0 chr2 203371255 203371334 -49885249 + MER67C LTR ERV1 631 710 0 1675 171 37 35 chr2 203371442 203371816 -49884767 + THE1C LTR MaLR 1 375 0 969 261 8 8 chr2 203372717 203372958 -49883625 + L2 LINE L2 2115 2355 -959 252 284 14 14 chr2 203373419 203373493 -49883090 - L2 LINE L2 -5 3267 3194 424 304 38 13 chr2 203373864 203374022 -49882561 - MIR SINE MIR -15 247 86 202 314 0 57 chr2 203375750 203375820 -49880763 + L2 LINE L2 3247 3312 -1 1714 182 7 3 chr2 203375850 203376141 -49880442 + AluJb SINE Alu 1 292 -20 780 96 0 0 chr2 203376927 203377042 -49879541 + (TTCC)n Simple_repeat Simple_repeat 3 117 0 2281 69 4 0 chr2 203377046 203377320 -49879263 - AluSp SINE Alu -38 275 1 2795 104 11 31 chr2 203377614 203378058 -49878525 - MER41B LTR ERV1 -200 435 1 215 354 52 0 chr2 203378593 203378689 -49877894 - MIR SINE MIR -26 236 136 207 294 156 25 chr2 203378698 203378858 -49877725 - L2 LINE L2 -430 2884 2704 1370 124 28 0 chr2 203379381 203379598 -49876985 + MER41B LTR ERV1 413 635 0 252 86 0 0 chr2 203379931 203379966 -49876617 + (TCCC)n Simple_repeat Simple_repeat 4 38 0 189 121 0 0 chr2 203380847 203380880 -49875703 + (CATG)n Simple_repeat Simple_repeat 2 34 0 298 328 29 52 chr2 203380909 203381083 -49875500 + MIR SINE MIR 18 142 -66 1967 139 7 26 chr2 203381156 203381465 -49875118 + AluSx SINE Alu 1 303 -9 513 318 23 12 chr2 203383582 203383755 -49872828 - MER5B DNA MER1_type -2 176 2 324 284 167 0 chr2 203384200 203384302 -49872281 + MLT1J LTR MaLR 17 135 -376 2432 110 55 0 chr2 203385616 203385961 -49870622 - THE1B LTR MaLR 0 364 1 1823 145 60 36 chr2 203387220 203387585 -49868998 + THE1C LTR MaLR 2 375 0 997 199 27 81 chr2 203387991 203388287 -49868296 + L1MA7 LINE L1 4586 4865 -1281 5650 104 23 1 chr2 203388289 203389116 -49867467 - L1PB1 LINE L1 -8 6143 5299 3508 160 21 35 chr2 203389160 203389970 -49866613 + L1MA7 LINE L1 5387 6291 0 22 0 0 0 chr2 203390419 203390441 -49866142 + AT_rich Low_complexity Low_complexity 1 22 0 346 208 69 0 chr2 203390445 203390517 -49866066 + AluSg SINE Alu 3 79 -221 41 21 0 0 chr2 203390808 203390856 -49865727 + AT_rich Low_complexity Low_complexity 1 48 0 508 226 20 75 chr2 203391824 203391970 -49864613 + MER5B DNA MER1_type 1 138 -40 260 210 0 111 chr2 203392295 203392376 -49864207 + L2 LINE L2 3193 3264 -8 2132 88 6 38 chr2 203392932 203393251 -49863332 + AluSc SINE Alu 1 309 0 27 0 0 0 chr2 203393290 203393317 -49863266 + AT_rich Low_complexity Low_complexity 1 27 0 577 285 175 59 chr2 203393440 203393580 -49863003 + L1MC4a LINE L1 5817 5939 -1869 2254 105 0 3 chr2 203393580 203393884 -49862699 - AluSq SINE Alu -10 303 1 577 285 175 59 chr2 203393884 203394336 -49862247 + L1MC4a LINE L1 5939 6478 -1330 2081 233 60 102 chr2 203394418 203395667 -49860916 + L1MC5 LINE L1 6497 7797 -164 414 0 0 0 chr2 203395667 203395713 -49860870 + (TG)n Simple_repeat Simple_repeat 1 46 0 1665 151 16 0 chr2 203395714 203395965 -49860618 - AluJb SINE Alu -53 259 5 2081 233 60 102 chr2 203395965 203396197 -49860386 + L1MC5 LINE L1 7796 7931 -30 391 91 36 0 chr2 203396446 203396501 -49860082 - AluJ/FRAM SINE Alu -14 288 232 42459 38 22 1 chr2 203397522 203403539 -49853044 + L1PA3 LINE L1 5 6147 -8 2007 161 0 10 chr2 203405269 203405580 -49851003 + AluSx SINE Alu 1 308 -4 1678 271 82 10 chr2 203405580 203406082 -49850501 + MLT1G1 LTR MaLR 24 561 -34 1033 179 10 5 chr2 203410124 203410319 -49846264 - MLT1B LTR MaLR -4 386 191 225 178 0 0 chr2 203410326 203410371 -49846212 + GA-rich Low_complexity Low_complexity 1 45 0 290 202 0 33 chr2 203410387 203410472 -49846111 - MLT1B LTR MaLR -196 178 98 21 0 0 0 chr2 203410674 203410695 -49845888 + AT_rich Low_complexity Low_complexity 1 21 0 1558 165 35 8 chr2 203411432 203411692 -49844891 - AluJb SINE Alu -45 267 1 2910 54 16 0 chr2 203411757 203412128 -49844455 - L1PA8 LINE L1 -10 6162 5786 2238 91 14 0 chr2 203412227 203412524 -49844059 - AluY SINE Alu -10 301 1 22 0 0 0 chr2 203412918 203412940 -49843643 + AT_rich Low_complexity Low_complexity 1 22 0 261 0 0 0 chr2 203414060 203414089 -49842494 + (CA)n Simple_repeat Simple_repeat 1 29 0 228 35 0 0 chr2 203414935 203414964 -49841619 + (TA)n Simple_repeat Simple_repeat 2 30 0 2062 115 21 3 chr2 203414975 203415263 -49841320 - AluSg SINE Alu -17 293 1 414 0 0 0 chr2 203415349 203415395 -49841188 + (TG)n Simple_repeat Simple_repeat 1 46 0 423 0 0 0 chr2 203415418 203415465 -49841118 + (TA)n Simple_repeat Simple_repeat 2 48 0 222 313 0 0 chr2 203415501 203415565 -49841018 + (TG)n Simple_repeat Simple_repeat 1 64 0 237 132 0 0 chr2 203416781 203416819 -49839764 + (T)n Simple_repeat Simple_repeat 1 38 0 1708 154 8 0 chr2 203416970 203417237 -49839346 - AluSx SINE Alu -43 269 1 2406 36 0 11 chr2 203417683 203417964 -49838619 - AluY SINE Alu -7 304 27 342 0 0 0 chr2 203418426 203418464 -49838119 + (TG)n Simple_repeat Simple_repeat 2 39 0 461 253 112 87 chr2 203418896 203419083 -49837500 - L1ME4a LINE L1 -204 5917 5736 2134 104 0 7 chr2 203419083 203419370 -49837213 - AluSg SINE Alu -25 285 1 461 253 112 87 chr2 203419370 203419774 -49836809 - L1ME4a LINE L1 -385 5736 5313 25 31 0 0 chr2 203419888 203419920 -49836663 + AT_rich Low_complexity Low_complexity 1 32 0 256 331 41 16 chr2 203420670 203420791 -49835792 + MIR SINE MIR 77 200 -62 1503 206 32 45 chr2 203421363 203421742 -49834841 + MLT1A2 LTR MaLR 1 374 0 2263 106 3 0 chr2 203421888 203422199 -49834384 + AluSx SINE Alu 1 312 0 611 278 27 42 chr2 203422575 203422767 -49833816 + MIR SINE MIR 3 189 -62 444 192 200 32 chr2 203422815 203422940 -49833643 - MLT1-int LTR MaLR -119 1252 1107 298 225 135 11 chr2 203423087 203423176 -49833407 - MLT1-int LTR MaLR -465 906 807 890 122 23 0 chr2 203423176 203423307 -49833276 + MLT1D LTR MaLR 367 500 -5 412 318 47 7 chr2 203423312 203423460 -49833123 - L2 LINE L2 -1389 1925 1772 284 279 29 0 chr2 203423685 203423753 -49832830 + L2 LINE L2 3242 3311 -2 2220 106 0 0 chr2 203423763 203424055 -49832528 + AluSg SINE Alu 1 292 -18 436 239 12 104 chr2 203425408 203425581 -49831002 + MIR SINE MIR 17 172 -62 293 273 52 117 chr2 203425670 203425824 -49830759 - L3 LINE CR1 0 1577 1434 357 330 54 22 chr2 203425910 203426095 -49830488 - MIR SINE MIR 0 262 72 1352 313 104 27 chr2 203426113 203426740 -49829843 - L3 LINE CR1 -295 1282 608 3443 101 48 4 chr2 203427096 203427593 -49828990 + LTR17 LTR ERV1 262 780 0 5050 90 3 21 chr2 203427598 203428299 -49828284 + HERV17 LTR ERV1 4 691 -7935 228 189 57 0 chr2 203428607 203428660 -49827923 + GA-rich Low_complexity Low_complexity 2 57 0 9562 83 8 15 chr2 203428660 203429980 -49826603 + HERV17 LTR ERV1 704 2014 -6612 * 10943 58 19 1 chr2 203429965 203431851 -49824732 + HERV17 LTR ERV1 2430 6019 -2607 300 51 0 0 chr2 203431844 203431883 -49824700 + HERV17 LTR ERV1 7510 7548 -1078 * 2368 62 3 0 chr2 203431873 203432164 -49824419 + HERV17 LTR ERV1 8335 8626 0 2338 101 0 9 chr2 203432164 203432492 -49824091 + LTR17 LTR ERV1 1 325 -455 404 228 94 24 chr2 203432527 203432654 -49823929 + L2 LINE L2 3117 3252 -61 595 313 190 33 chr2 203433381 203433749 -49822834 + L3b LINE CR1 1153 1578 -5 21 36 0 0 chr2 203434705 203434733 -49821850 + AT_rich Low_complexity Low_complexity 1 28 0 387 248 90 99 chr2 203435597 203436013 -49820570 + MLT1J2 LTR MaLR 15 428 -22 654 291 140 57 chr2 203436166 203436636 -49819947 + LTR33 LTR ERVL 13 521 0 4880 52 15 0 chr2 203437120 203438139 -49818444 - L1PA7 LINE L1 -262 5892 4859 262 225 181 37 chr2 203438395 203438666 -49817917 + L1M4 LINE L1 2959 3268 -2878 23 54 0 0 chr2 203438734 203438771 -49817812 + AT_rich Low_complexity Low_complexity 1 37 0 1343 183 90 69 chr2 203442841 203443273 -49813310 - MSTB2 LTR MaLR 0 457 17 198 0 0 0 chr2 203444016 203444038 -49812545 + (T)n Simple_repeat Simple_repeat 1 22 0 28 61 0 0 chr2 203444344 203444393 -49812190 + AT_rich Low_complexity Low_complexity 1 49 0 22 0 0 0 chr2 203444810 203444832 -49811751 + AT_rich Low_complexity Low_complexity 1 22 0 437 320 102 15 chr2 203445270 203445467 -49811116 - MIR SINE MIR -39 223 10 228 285 49 57 chr2 203445596 203445719 -49810864 + HsTC2 DNA Tc2 13 134 -1764 * 648 213 91 14 chr2 203445716 203445937 -49810646 + HsTC2 DNA Tc2 1659 1896 -2 250 307 13 27 chr2 203446045 203446120 -49810463 + L2 LINE L2 3194 3267 -5 325 303 98 0 chr2 203446124 203446246 -49810337 - MARNA DNA Mariner -360 226 93 270 333 69 11 chr2 203446300 203446387 -49810196 + MIR SINE MIR 19 110 -98 197 263 35 0 chr2 203446645 203446702 -49809881 + L2 LINE L2 3214 3272 0 6734 122 50 34 chr2 203447043 203448254 -49808329 + Tigger3b DNA MER2_type 1 1231 0 226 310 211 7 chr2 203449674 203449816 -49806767 - MER5A DNA MER1_type -18 171 1 262 329 0 0 chr2 203451131 203451207 -49805376 - MIR3 SINE MIR -9 199 124 772 310 139 75 chr2 203452000 203452334 -49804249 - L3 LINE CR1 -26 1551 1240 306 0 0 0 chr2 203452334 203452368 -49804215 + (CA)n Simple_repeat Simple_repeat 2 35 0 772 310 139 75 chr2 203452368 203452413 -49804170 - L3 LINE CR1 -337 1240 1199 378 0 0 0 chr2 203452413 203452455 -49804128 + (CA)n Simple_repeat Simple_repeat 2 43 0 772 310 139 75 chr2 203452455 203452989 -49803594 - L3 LINE CR1 -378 1199 579 317 204 235 10 chr2 203453301 203453399 -49803184 + ORSL DNA AcHobo 149 268 -7 23 54 0 0 chr2 203453646 203453683 -49802900 + AT_rich Low_complexity Low_complexity 1 37 0 25 0 0 0 chr2 203453776 203453801 -49802782 + AT_rich Low_complexity Low_complexity 1 25 0 1164 38 0 0 chr2 203453866 203453998 -49802585 + AluY SINE Alu 1 132 -179 318 279 60 20 chr2 203453998 203454104 -49802479 - L1ME4a LINE L1 -65 6056 5956 2239 166 61 15 chr2 203454104 203454513 -49802070 + MSTA LTR MaLR 1 428 0 318 279 60 20 chr2 203454513 203454607 -49801976 - L1ME4a LINE L1 -165 5956 5848 318 185 70 57 chr2 203454617 203454774 -49801809 - L1ME4a LINE L1 -238 5883 5725 24 77 0 0 chr2 203454997 203455049 -49801534 + AT_rich Low_complexity Low_complexity 1 52 0 22 0 0 0 chr2 203456354 203456376 -49800207 + AT_rich Low_complexity Low_complexity 1 22 0 210 234 26 104 chr2 203456461 203456538 -49800045 - MIR SINE MIR -190 72 2 217 286 26 0 chr2 203456972 203457049 -49799534 + (TA)n Simple_repeat Simple_repeat 2 80 0 * 245 271 0 14 chr2 203456995 203457065 -49799518 + (TATATG)n Simple_repeat Simple_repeat 6 74 0 255 31 0 0 chr2 203457065 203457097 -49799486 + (GA)n Simple_repeat Simple_repeat 1 32 0 387 286 51 29 chr2 203457368 203457543 -49799040 + MIR SINE MIR 84 262 0 342 262 11 6 chr2 203457652 203457831 -49798752 + GA-rich Low_complexity Low_complexity 1 180 0 24 0 0 0 chr2 203458921 203458945 -49797638 + AT_rich Low_complexity Low_complexity 1 24 0 2128 183 23 68 chr2 203458960 203459489 -49797094 + LTR22 LTR ERVK 1 505 -4 808 102 0 24 chr2 203459576 203459703 -49796880 - L1MA1 LINE L1 0 6302 6179 415 298 66 35 chr2 203461455 203461683 -49794900 - MIR SINE MIR 0 262 28 1824 164 146 11 chr2 203462444 203462815 -49793768 - MSTA LTR MaLR -7 421 1 376 253 75 91 chr2 203463064 203463329 -49793254 - L1ME4a LINE L1 -38 6083 5823 1120 199 141 60 chr2 203463329 203463384 -49793199 - Charlie4a DNA MER1_type -1456 505 456 1972 198 31 55 chr2 203463384 203463860 -49792723 + MLT1C LTR MaLR 1 465 -2 1120 199 141 60 chr2 203463860 203463969 -49792614 - Charlie4a DNA MER1_type -1505 456 357 2304 104 0 0 chr2 203463969 203464267 -49792316 - AluSq SINE Alu -15 298 1 1120 199 141 60 chr2 203464267 203464533 -49792050 - Charlie4a DNA MER1_type -1604 357 39 191 173 19 0 chr2 203468182 203468234 -49788349 + GA-rich Low_complexity Low_complexity 1 53 0 604 320 32 59 chr2 203468430 203468783 -49787800 + L2 LINE L2 2236 2578 -736 1766 184 42 11 chr2 203468783 203469137 -49787446 - MLT1A1 LTR MaLR 0 365 1 604 320 32 59 chr2 203469137 203469189 -49787394 + L2 LINE L2 2578 2630 -684 353 360 59 22 chr2 203469272 203469544 -49787039 + L2 LINE L2 2851 3132 -181 923 78 7 26 chr2 203470377 203470531 -49786052 + (TTTCC)n Simple_repeat Simple_repeat 2 152 0 36 0 0 0 chr2 203470703 203470739 -49785844 + AT_rich Low_complexity Low_complexity 1 36 0 6613 71 29 15 chr2 203470743 203471768 -49784815 - L1PA10 LINE L1 -12 6471 5443 1285 123 5 0 chr2 203471775 203471962 -49784621 - L1PA7 LINE L1 -10 6144 5957 14609 136 11 10 chr2 203471963 203472840 -49783743 - L1PA10 LINE L1 -1033 5428 4554 2252 117 3 0 chr2 203472840 203473148 -49783435 - AluSq SINE Alu -4 309 1 14609 136 11 10 chr2 203473148 203475020 -49781563 - L1PA10 LINE L1 -1907 4554 2676 5193 226 22 58 chr2 203475018 203477326 -49779257 - L1PA10 LINE L1 -4007 2454 1 * 336 339 156 31 chr2 203477493 203477782 -49778801 - L2 LINE L2 -1 3312 2988 1981 89 0 73 chr2 203480352 203480665 -49775918 + AluY SINE Alu 5 294 -17 181 213 131 16 chr2 203480907 203480968 -49775615 - L2 LINE L2 0 3313 3246 2319 96 0 0 chr2 203482297 203482590 -49773993 - AluSg SINE Alu -17 293 1 21 36 0 0 chr2 203482667 203482695 -49773888 + AT_rich Low_complexity Low_complexity 1 28 0 1160 276 144 24 chr2 203483904 203484368 -49772215 + LTR50 LTR ERVL 1 520 -275 2387 154 36 25 chr2 203484429 203484869 -49771714 - MER65A LTR ERV1 0 445 1 1814 250 32 9 chr2 203484869 203485333 -49771250 - MER65A-int LTR ERV1 0 4871 4397 * 1874 251 60 5 chr2 203485328 203485762 -49770821 - MER65A-int LTR ERV1 -809 4062 3605 296 122 143 0 chr2 203485774 203485823 -49770760 - LTR49-int LTR ERV1 -939 5392 5337 1201 203 33 23 chr2 203485910 203486210 -49770373 - LTR49-int LTR ERV1 -1113 3823 3521 5912 98 19 0 chr2 203486226 203486631 -49769952 - L1PA13 LINE L1 0 6163 5767 2373 152 18 0 chr2 203486631 203487027 -49769556 + MER57A LTR ERV1 1 403 0 5912 98 19 0 chr2 203487027 203487639 -49768944 - L1PA13 LINE L1 -396 5767 5142 1043 190 77 92 chr2 203487697 203488301 -49768282 - LTR49-int LTR ERV1 -4422 2336 1584 254 91 0 0 chr2 203488448 203488481 -49768102 - LTR57-int LTR ERVL -3771 1572 1540 872 153 27 20 chr2 203488482 203488632 -49767951 - AluJo SINE Alu -78 234 84 324 255 92 50 chr2 203488632 203488773 -49767810 - L1M4 LINE L1 -1758 4388 4242 2005 140 55 42 chr2 203488848 203489383 -49767200 + MLT2A2 LTR ERVL 1 544 -10 5994 161 46 12 chr2 203489399 203490563 -49766020 - Tigger3b DNA MER2_type -26 1205 2 266 275 8 58 chr2 203490680 203490800 -49765783 - L1M4 LINE L1 -2135 4011 3898 192 253 44 77 chr2 203491019 203491110 -49765473 + L2 LINE L2 2190 2277 -1037 398 291 167 22 chr2 203492184 203492411 -49764172 - HAL1 LINE L1 -1016 1491 1232 237 288 75 25 chr2 203492429 203492707 -49763876 - L1MEd LINE L1 -5018 1101 810 2784 200 14 33 chr2 203492711 203493300 -49763283 - MLT2B3 LTR ERVL -3 533 1 23 0 0 0 chr2 203493469 203493492 -49763091 + AT_rich Low_complexity Low_complexity 1 23 0 501 298 19 25 chr2 203493529 203493687 -49762896 - L1MEd LINE L1 -5527 592 436 278 189 19 0 chr2 203493837 203493890 -49762693 - MLT1J LTR MaLR -146 365 312 210 71 0 0 chr2 203494099 203494127 -49762456 + (CATATA)n Simple_repeat Simple_repeat 2 29 0 243 310 0 10 chr2 203494151 203494251 -49762332 + (TA)n Simple_repeat Simple_repeat 1 99 0 21 36 0 0 chr2 203494368 203494396 -49762187 + AT_rich Low_complexity Low_complexity 1 28 0 959 206 57 92 chr2 203495007 203495375 -49761208 + MLT1B LTR MaLR 20 374 -16 195 323 15 0 chr2 203497521 203497586 -49758997 - L2 LINE L2 -2 3311 3246 260 265 125 66 chr2 203497813 203497949 -49758634 - L2 LINE L2 -554 2760 2617 187 301 107 0 chr2 203498025 203498128 -49758455 + L2 LINE L2 1918 2031 -1283 204 125 0 0 chr2 203499309 203499341 -49757242 + (ATG)n Simple_repeat Simple_repeat 2 33 0 3168 36 0 3 chr2 203500035 203500419 -49756164 - L1PA4 LINE L1 -3 6152 5770 41993 39 22 1 chr2 203500434 203506458 -49750125 - L1PA3 LINE L1 -4 6151 1 32315 43 1 0 chr2 203506458 203510883 -49745700 - L1PA4 LINE L1 -369 5786 1361 2081 84 32 0 chr2 203510968 203511253 -49745330 - AluSp SINE Alu -8 305 12 249 333 61 56 chr2 203511477 203511675 -49744908 - MLT1K LTR MaLR -273 315 117 1385 217 100 22 chr2 203511706 203512066 -49744517 - MSTD LTR MaLR -5 391 4 1007 219 0 34 chr2 203512238 203512476 -49744107 + L1MA10 LINE L1 6090 6319 -15 5875 100 8 0 chr2 203512540 203513371 -49743212 - L1PA12 LINE L1 0 6168 5331 2594 237 47 43 chr2 203513521 203514759 -49741824 - L1ME2 LINE L1 -1 6163 4921 237 320 109 0 chr2 203515191 203515366 -49741217 + L1M4 LINE L1 2884 3077 -3069 2117 132 3 7 chr2 203515371 203515681 -49740902 + AluSq SINE Alu 1 309 -4 1488 296 121 27 chr2 203515701 203517318 -49739265 + L1M4 LINE L1 3112 4920 -1226 1797 153 20 17 chr2 203517762 203518062 -49738521 + AluJb SINE Alu 1 301 -11 617 177 85 67 chr2 203518090 203518254 -49738329 + MLT1A1 LTR MaLR 1 167 -198 212 375 59 21 chr2 203519233 203519470 -49737113 + L2 LINE L2 1752 1997 -1317 288 0 0 0 chr2 203519512 203519544 -49737039 + (CA)n Simple_repeat Simple_repeat 2 33 0 901 186 40 40 chr2 203521048 203521274 -49735309 - MER34 LTR ERV1 0 542 317 29152 82 13 7 chr2 203521350 203526073 -49730510 + L1PA6 LINE L1 11 4761 -1385 2608 75 12 12 chr2 203526054 203526520 -49730063 + L1PA6 LINE L1 5019 5485 -665 * 1480 58 0 0 chr2 203526520 203526699 -49729884 + L1PA3 LINE L1 5966 6153 -2 5160 67 0 3 chr2 203526704 203527374 -49729209 + L1PA6 LINE L1 5476 6143 -11 695 212 114 11 chr2 203527379 203527563 -49729020 - MER34 LTR ERV1 -313 229 27 604 217 52 84 chr2 203528018 203528181 -49728402 - MER34-int LTR ERV1 -238 4777 4657 664 189 16 0 chr2 203528181 203528308 -49728275 + FLAM_A SINE Alu 5 133 0 604 217 52 84 chr2 203528308 203528338 -49728245 - MER34-int LTR ERV1 -358 4657 4628 2134 126 3 0 chr2 203528452 203528754 -49727829 + AluSx SINE Alu 1 303 -9 801 202 81 43 chr2 203528761 203529083 -49727500 - MER34-int LTR ERV1 -3372 1564 1231 479 249 92 90 chr2 203529452 203529567 -49727016 - MER34-int LTR ERV1 -5853 478 365 7557 26 0 5 chr2 203529567 203530718 -49725865 - L1PA4 LINE L1 -3 6152 5003 479 249 92 90 chr2 203530718 203531048 -49725535 - MER34-int LTR ERV1 -5966 365 32 915 213 78 3 chr2 203531094 203531544 -49725039 - MER34 LTR ERV1 -3 539 27 249 333 41 16 chr2 203531603 203531726 -49724857 + L2 LINE L2 3187 3312 -1 488 306 131 33 chr2 203531851 203532302 -49724281 + MLT1J LTR MaLR 3 497 -14 2468 158 7 12 chr2 203532755 203533173 -49723410 - MER47B DNA MER2_type -2 416 1 752 167 40 147 chr2 203533395 203533646 -49722937 - AluJb SINE Alu 0 312 89 208 293 46 75 chr2 203533838 203534012 -49722571 + L2 LINE L2 3131 3299 -14 41 48 0 0 chr2 203534353 203534415 -49722168 + AT_rich Low_complexity Low_complexity 1 62 0 942 50 0 0 chr2 203534953 203535073 -49721510 + L1PA4 LINE L1 6036 6155 0 1858 127 42 70 chr2 203535459 203535845 -49720738 - THE1C LTR MaLR 0 375 1 33 43 0 0 chr2 203535924 203535971 -49720612 + AT_rich Low_complexity Low_complexity 1 47 0 33 0 0 0 chr2 203536555 203536588 -49719995 + AT_rich Low_complexity Low_complexity 1 33 0 737 226 98 36 chr2 203536824 203537129 -49719454 - HAL1b LINE L1 -81 1267 944 637 289 58 45 chr2 203537142 203537748 -49718835 - HAL1b LINE L1 -558 790 61 317 239 66 0 chr2 203538092 203538209 -49718374 - L1ME3A LINE L1 -277 5885 5753 2171 170 59 2 chr2 203538784 203539190 -49717393 - MSTB1 LTR MaLR 0 432 4 22 0 0 0 chr2 203539212 203539234 -49717349 + AT_rich Low_complexity Low_complexity 1 22 0 273 259 75 56 chr2 203539420 203539582 -49717001 - MIR SINE MIR 0 262 99 530 237 9 0 chr2 203540371 203540485 -49716098 - LTR67 LTR ERVL -1 556 442 7030 222 45 25 chr2 203541571 203543493 -49713090 - L1MB1 LINE L1 -5 5987 3978 198 0 0 0 chr2 203543493 203543515 -49713068 + (TTTC)n Simple_repeat Simple_repeat 3 24 0 7030 222 45 25 chr2 203543515 203544531 -49712052 - L1MB1 LINE L1 -2014 3978 2984 267 198 178 30 chr2 203544598 203544699 -49711884 - L1MB1 LINE L1 -2990 2980 2865 488 163 8 81 chr2 203544700 203544823 -49711760 - AluJ SINE Alu -8 304 191 1014 194 11 5 chr2 203544934 203545120 -49711463 - AluJ SINE Alu -125 187 1 3640 111 0 19 chr2 203545139 203545708 -49710875 - L1PB1 LINE L1 -1 6150 5593 291 93 56 0 chr2 203545724 203545778 -49710805 - L1PB1 LINE L1 -1 6150 6094 441 171 0 0 chr2 203545779 203545855 -49710728 + L1PBa LINE L1 636 711 -6152 6826 171 10 19 chr2 203545857 203547582 -49709001 - L1P5 LINE L1 -543 5608 3901 1206 237 67 0 chr2 203547582 203547898 -49708685 - L1MB1 LINE L1 -3101 2869 2533 957 310 53 26 chr2 203547925 203548264 -49708319 - L1MB1 LINE L1 -5543 348 1 34 0 0 0 chr2 203548652 203548686 -49707897 + AT_rich Low_complexity Low_complexity 1 34 0 2178 87 28 3 chr2 203548733 203549021 -49707562 - AluY SINE Alu -16 295 1 3957 182 31 12 chr2 203549021 203549833 -49706750 - L1 LINE L1 -1971 4175 3349 259 149 30 60 chr2 203549833 203549900 -49706683 - MSTA LTR MaLR -3 425 361 2518 135 23 3 chr2 203549906 203550298 -49706285 - MSTA LTR MaLR -28 400 1 1797 187 30 2 chr2 203550298 203550700 -49705883 - L1 LINE L1 -2795 3351 2939 2917 131 31 33 chr2 203551079 203551592 -49704991 - Tigger1 DNA MER2_type -1906 512 1 1541 207 10 16 chr2 203552105 203552419 -49704164 - AluJo SINE Alu 0 312 1 313 227 0 27 chr2 203552426 203552501 -49704082 - MER94 DNA DNA -61 73 1 304 288 53 61 chr2 203552919 203552987 -49703596 + L1ME4a LINE L1 5955 6022 -99 2514 88 11 8 chr2 203552987 203553341 -49703242 + THE1A LTR MaLR 1 355 0 11083 104 8 4 chr2 203553341 203554915 -49701668 + THE1A-int LTR MaLR 1 1580 0 2571 91 8 3 chr2 203554915 203555268 -49701315 + THE1A LTR MaLR 1 355 0 304 288 53 61 chr2 203555268 203555329 -49701254 + L1ME4a LINE L1 6019 6085 -36 23 0 0 0 chr2 203555683 203555706 -49700877 + AT_rich Low_complexity Low_complexity 1 23 0 243 228 15 86 chr2 203555839 203556036 -49700547 + L1M3 LINE L1 5182 5364 -782 180 0 0 0 chr2 203556055 203556075 -49700508 + (TA)n Simple_repeat Simple_repeat 1 20 0 226 186 34 17 chr2 203556075 203556134 -49700449 + L1M3 LINE L1 5388 5447 -736 804 277 90 14 chr2 203556691 203556980 -49699603 + L1MEd LINE L1 334 644 -5475 279 324 78 21 chr2 203556992 203557134 -49699449 - LTR33 LTR ERVL -62 459 310 242 314 29 7 chr2 203557277 203557417 -49699166 + L1ME LINE L1 5743 5885 -285 334 322 34 14 chr2 203558217 203558363 -49698220 - MIR3 SINE MIR -14 194 46 582 265 5 63 chr2 203558609 203558798 -49697785 + MER5B DNA MER1_type 1 178 0 182 176 20 0 chr2 203558822 203558873 -49697710 + CT-rich Low_complexity Low_complexity 1 52 0 21 57 0 0 chr2 203559030 203559065 -49697518 + AT_rich Low_complexity Low_complexity 1 35 0 477 330 101 6 chr2 203559569 203559748 -49696835 - MIR SINE MIR -11 251 56 2051 266 70 44 chr2 203560022 203560880 -49695703 + L1ME1 LINE L1 5254 6133 -33 21 82 0 0 chr2 203562550 203562599 -49693984 + AT_rich Low_complexity Low_complexity 1 49 0 678 149 97 39 chr2 203563284 203563438 -49693145 + FRAM SINE Alu 1 159 -17 1948 206 91 22 chr2 203563646 203564248 -49692335 + MER114 LTR ERV 3 646 -2 21 0 0 0 chr2 203564458 203564479 -49692104 + AT_rich Low_complexity Low_complexity 1 21 0 2274 192 22 24 chr2 203566754 203567262 -49689321 + L1M4 LINE L1 4334 4842 -1304 2526 107 11 11 chr2 203567262 203567635 -49688948 + THE1C LTR MaLR 1 373 -2 2274 192 22 24 chr2 203567635 203567667 -49688916 + L1M4 LINE L1 4842 4873 -1273 1811 269 25 25 chr2 203568149 203568659 -49687924 + L1M4 LINE L1 15 524 -6018 * 1870 204 66 31 chr2 203568658 203568750 -49687833 - L1M3c LINE L1 -4653 2384 2297 1364 190 0 72 chr2 203568750 203569081 -49687502 - AluJb SINE Alu 0 309 1 1870 204 66 31 chr2 203569081 203569173 -49687410 - L1M3c LINE L1 -4740 2297 2210 1957 148 3 13 chr2 203569173 203569478 -49687105 - AluJb SINE Alu -10 302 1 1870 204 66 31 chr2 203569478 203569975 -49686608 - L1M3c LINE L1 -4827 2210 1694 4259 137 61 28 chr2 203569977 203570812 -49685771 + L1MA8 LINE L1 5415 6277 -14 525 175 97 9 chr2 203570841 203570955 -49685628 + L1M4 LINE L1 518 641 -5901 665 285 102 13 chr2 203571066 203571301 -49685282 - MIR SINE MIR -2 260 5 347 317 10 10 chr2 203571570 203571674 -49684909 + MIR SINE MIR 37 140 -68 632 244 62 24 chr2 203571791 203572000 -49684583 + L2 LINE L2 3091 3307 -6 200 33 0 33 chr2 203572003 203572033 -49684550 + (TTA)n Simple_repeat Simple_repeat 3 31 0 1805 157 24 0 chr2 203572690 203572983 -49683600 + AluJb SINE Alu 1 300 -12 367 259 179 3 chr2 203574648 203574769 -49681814 - MIR SINE MIR -62 146 16 218 31 0 31 chr2 203575127 203575159 -49681424 + (TTATA)n Simple_repeat Simple_repeat 2 32 0 182 231 58 19 chr2 203575607 203575659 -49680924 - L2 LINE L2 -4 3309 3256 209 360 35 18 chr2 203576409 203576523 -49680060 - L2 LINE L2 -222 3050 2935 2016 103 7 0 chr2 203577182 203577490 -49679093 + AluY SINE Alu 1 310 0 345 342 65 22 chr2 203578499 203578683 -49677900 + MIR SINE MIR 65 256 -6 9178 156 32 13 chr2 203578869 203580412 -49676171 + L1M1 LINE L1 33 1604 -5961 4313 118 23 13 chr2 203580413 203581114 -49675469 + L1MA3 LINE L1 5596 6303 -2 1232 63 0 0 chr2 203581264 203581423 -49675160 + L1PA5 LINE L1 5993 6151 -3 2037 129 0 0 chr2 203581497 203581777 -49674806 - AluSx SINE Alu -32 280 1 2372 90 0 0 chr2 203581872 203582182 -49674401 + AluSx SINE Alu 1 310 -2 1386 194 50 41 chr2 203582490 203582830 -49673753 + MLT1A1 LTR MaLR 11 353 -12 1200 269 91 17 chr2 203584666 203585149 -49671434 + LTR40a LTR ERVL 1 519 0 1796 206 26 0 chr2 203585680 203586020 -49670563 - MLT1A1 LTR MaLR 0 365 17 214 361 83 0 chr2 203586328 203586436 -49670147 + L2 LINE L2 3179 3295 -18 378 205 13 0 chr2 203587052 203587130 -49669453 + MER116 DNA Mariner 1 79 -1 755 245 75 40 chr2 203588570 203588823 -49667760 + MIR SINE MIR 1 262 0 519 263 70 53 chr2 203589008 203589179 -49667404 + MLT1A2 LTR MaLR 1 174 -216 856 267 5 5 chr2 203589222 203589417 -49667166 + MLT1A2 LTR MaLR 173 367 -7 6103 188 29 25 chr2 203589669 203591797 -49664786 + L1MC1 LINE L1 4196 6333 0 22 0 0 0 chr2 203592716 203592738 -49663845 + AT_rich Low_complexity Low_complexity 1 22 0 883 209 12 0 chr2 203592742 203592914 -49663669 + FAM SINE Alu 1 174 -1 389 306 22 0 chr2 203593002 203593136 -49663447 - MIR SINE MIR 0 262 126 26 74 0 0 chr2 203593222 203593276 -49663307 + AT_rich Low_complexity Low_complexity 1 54 0 239 223 240 8 chr2 203593302 203593423 -49663160 - L2 LINE L2 -67 3246 3098 1424 221 142 25 chr2 203593470 203593878 -49662705 + LTR40c LTR ERVL 7 462 -3 184 267 40 27 chr2 203593878 203593953 -49662630 - MIR SINE MIR -177 85 10 24 32 0 0 chr2 203594045 203594076 -49662507 + AT_rich Low_complexity Low_complexity 1 31 0 4464 38 0 0 chr2 203594670 203595200 -49661383 + L1P LINE L1 3927 4456 -1690 33 0 0 0 chr2 203595282 203595315 -49661268 + AT_rich Low_complexity Low_complexity 1 33 0 210 195 24 0 chr2 203595551 203595592 -49660991 + (TCTA)n Simple_repeat Simple_repeat 2 43 0 477 354 115 48 chr2 203596944 203597917 -49658666 + L2 LINE L2 1940 2977 -337 29 28 0 0 chr2 203597989 203598025 -49658558 + AT_rich Low_complexity Low_complexity 1 36 0 938 280 132 5 chr2 203598172 203598558 -49658025 - MLT1H LTR MaLR -56 493 59 24 67 0 0 chr2 203599943 203599988 -49656595 + AT_rich Low_complexity Low_complexity 1 45 0 22 35 0 0 chr2 203600055 203600084 -49656499 + AT_rich Low_complexity Low_complexity 1 29 0 856 105 0 0 chr2 203600446 203600560 -49656023 + AluJb SINE Alu 12 125 -187 185 51 17 102 chr2 203600571 203600630 -49655953 + (CAAAAA)n Simple_repeat Simple_repeat 1 54 0 976 173 0 0 chr2 203600631 203600793 -49655790 + FRAM SINE Alu 3 164 -2 191 246 169 0 chr2 203601249 203601314 -49655269 + MIR SINE MIR 69 144 -118 377 116 14 0 chr2 203601484 203601553 -49655030 + (CA)n Simple_repeat Simple_repeat 1 70 0 290 318 100 0 chr2 203602387 203602497 -49654086 + MER5B DNA MER1_type 58 178 0 9917 197 33 67 chr2 203603204 203604471 -49652112 - L1PA16 LINE L1 -2 6164 4855 1687 127 6 115 chr2 203604471 203604810 -49651773 - AluSx SINE Alu 0 302 1 9917 197 33 67 chr2 203604810 203605432 -49651151 - L1PA16 LINE L1 -1311 4855 4213 357 24 0 0 chr2 203605432 203605474 -49651109 + (TG)n Simple_repeat Simple_repeat 1 42 0 9917 197 33 67 chr2 203605474 203606093 -49650490 - L1PA16 LINE L1 -1953 4213 3574 1970 141 7 0 chr2 203606093 203606383 -49650200 - AluSx SINE Alu -20 292 1 9917 197 33 67 chr2 203606383 203607286 -49649297 - L1PA16 LINE L1 -2592 3574 2950 8264 48 0 0 chr2 203607286 203609069 -49647514 - L1PA5 LINE L1 -9 6145 4364 9917 197 33 67 chr2 203609069 203609383 -49647200 - L1PA16 LINE L1 -3216 2950 2627 756 254 76 60 chr2 203609399 203609714 -49646869 - MLT1D LTR MaLR -183 322 3 221 146 21 0 chr2 203609731 203609779 -49646804 + (CA)n Simple_repeat Simple_repeat 2 50 0 500 222 7 76 chr2 203611383 203611428 -49645155 + MER94 DNA DNA 1 48 -86 837 220 84 0 chr2 203611428 203611619 -49644964 - MER3 DNA MER1_type 0 209 3 500 222 7 76 chr2 203611619 203611717 -49644866 + MER94 DNA DNA 48 134 0 673 335 97 23 chr2 203613348 203613966 -49642617 + L1M4 LINE L1 4613 5276 -870 429 354 80 38 chr2 203613969 203614243 -49642340 + L2 LINE L2 2425 2717 -597 2006 119 14 0 chr2 203614243 203614536 -49642047 + AluSx SINE Alu 1 297 -15 429 354 80 38 chr2 203614536 203614600 -49641983 + L2 LINE L2 2717 2777 -537 449 337 97 14 chr2 203614617 203614905 -49641678 + L2 LINE L2 2921 3232 -81 2387 192 68 31 chr2 203615546 203616088 -49640495 + MER68 LTR ERV1 1 562 0 2987 9 0 0 chr2 203616366 203616710 -49639873 - L1PA3 LINE L1 -546 5609 5266 4613 28 2 0 chr2 203616710 203617249 -49639334 + L1PA3 LINE L1 5611 6152 -3 434 236 35 35 chr2 203617750 203617894 -49638689 + MIR SINE MIR 60 203 -59 266 232 91 81 chr2 203618578 203618677 -49637906 + MIR SINE MIR 8 107 -155 1852 128 69 28 chr2 203619044 203619404 -49637179 + THE1C LTR MaLR 1 375 0 252 0 0 0 chr2 203619856 203619884 -49636699 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 27 0 0 0 chr2 203620405 203620432 -49636151 + AT_rich Low_complexity Low_complexity 1 27 0 21 57 0 0 chr2 203620694 203620729 -49635854 + AT_rich Low_complexity Low_complexity 1 35 0 6977 56 8 0 chr2 203621648 203622772 -49633811 + L1PA6 LINE L1 5020 6150 -4 1120 157 11 0 chr2 203622894 203623085 -49633498 - L1MB5 LINE L1 -184 5990 5798 * 2766 206 42 8 chr2 203623083 203623903 -49632680 - L1MB5 LINE L1 -656 5524 4674 1261 263 90 33 chr2 203623993 203624681 -49631902 + HAL1 LINE L1 910 1636 -871 930 140 40 104 chr2 203624868 203625006 -49631577 + MER2 DNA MER2_type 138 258 -87 4435 146 10 0 chr2 203625006 203625725 -49630858 - L1PA16 LINE L1 -8 6158 5433 930 140 40 104 chr2 203625725 203625808 -49630775 + MER2 DNA MER2_type 258 345 0 467 302 85 11 chr2 203627216 203627405 -49629178 + MIR SINE MIR 14 216 -46 215 383 109 20 chr2 203627524 203627725 -49628858 - MIR SINE MIR -36 226 8 22 0 0 0 chr2 203628435 203628457 -49628126 + AT_rich Low_complexity Low_complexity 1 22 0 184 280 0 0 chr2 203628601 203628651 -49627932 - L2 LINE L2 0 3313 3264 278 270 134 16 chr2 203628876 203629003 -49627580 - MIR SINE MIR -62 146 16 260 327 77 24 chr2 203629011 203629179 -49627404 + MER5A DNA MER1_type 6 182 -7 31 58 0 0 chr2 203629663 203629715 -49626868 + AT_rich Low_complexity Low_complexity 1 52 0 15035 132 18 12 chr2 203630091 203631260 -49625323 - Tigger1 DNA MER2_type -1 2417 1257 1240 121 121 5 chr2 203631260 203631466 -49625117 - MER30 DNA MER1_type 0 230 1 15035 132 18 12 chr2 203631466 203632698 -49623885 - Tigger1 DNA MER2_type -1161 1257 1 685 345 70 21 chr2 203632715 203633144 -49623439 + LTR16A LTR ERVL 1 450 0 446 315 176 24 chr2 203633144 203633718 -49622865 - HAL1 LINE L1 -190 2317 1657 300 288 142 32 chr2 203633933 203634370 -49622213 - HAL1 LINE L1 -1273 1234 750 778 298 83 17 chr2 203634543 203635131 -49621452 - L1M4 LINE L1 -2391 3755 3129 1183 265 71 34 chr2 203636028 203636522 -49620061 - LTR33A LTR ERVL -2 521 10 2528 163 23 3 chr2 203636904 203637577 -49619006 + L1P4 LINE L1 4826 5515 -650 22 35 0 0 chr2 203638101 203638130 -49618453 + AT_rich Low_complexity Low_complexity 1 29 0 560 259 102 24 chr2 203638279 203638979 -49617604 - L1ME3A LINE L1 -8 6556 5732 * 1423 290 69 13 chr2 203638949 203639732 -49616851 - L1ME3A LINE L1 -1605 4935 4109 419 327 70 5 chr2 203639749 203639963 -49616620 - L1ME3A LINE L1 -2948 3592 3365 345 311 59 56 chr2 203640100 203640473 -49616110 - L1ME3A LINE L1 -4594 2127 1754 7633 21 1 0 chr2 203640477 203641370 -49615213 - L1PA4 LINE L1 -3 6152 5259 405 327 34 38 chr2 203641372 203641819 -49614764 - L1ME3A LINE L1 -4829 1711 1267 22 0 0 0 chr2 203641986 203642008 -49614575 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr2 203642517 203642542 -49614041 + AT_rich Low_complexity Low_complexity 1 25 0 269 276 126 98 chr2 203643191 203643437 -49613146 - MIR SINE MIR -6 256 4 742 203 0 0 chr2 203643733 203643866 -49612717 - FRAM SINE Alu -33 143 11 303 275 33 22 chr2 203643978 203644069 -49612514 - L1MEc LINE L1 -4151 2245 2154 372 88 0 0 chr2 203644790 203644847 -49611736 + (CA)n Simple_repeat Simple_repeat 1 57 0 43 35 0 0 chr2 203646578 203646635 -49609948 + AT_rich Low_complexity Low_complexity 1 57 0 535 15 0 0 chr2 203647107 203647174 -49609409 + L1PA3 LINE L1 6086 6152 -3 243 88 0 0 chr2 203647724 203647758 -49608825 + (TG)n Simple_repeat Simple_repeat 1 34 0 22 35 0 0 chr2 203647872 203647901 -49608682 + AT_rich Low_complexity Low_complexity 1 29 0 1633 164 6 19 chr2 203697950 203698379 -49558204 + L1M2 LINE L1 2622 3043 -3805 2038 133 24 35 chr2 203698379 203698755 -49557828 - THE1C LTR MaLR 0 375 4 1633 164 6 19 chr2 203698755 203698802 -49557781 + L1M2 LINE L1 3043 3089 -3759 1664 89 38 27 chr2 203698802 203699039 -49557544 + L1MA4A LINE L1 6008 6250 -53 1793 166 7 7 chr2 203699039 203699334 -49557249 + AluJo SINE Alu 1 295 -17 1664 89 38 27 chr2 203699334 203699388 -49557195 + L1MA4A LINE L1 6250 6302 -1 441 313 134 10 chr2 203699552 203699753 -49556830 - L3b LINE CR1 -255 1328 1103 274 390 51 6 chr2 203699843 203700020 -49556563 + MIR3 SINE MIR 24 208 0 1254 82 0 33 chr2 203700967 203701151 -49555432 + L1PA8 LINE L1 5995 6172 0 1034 151 19 0 chr2 203703446 203703605 -49552978 + FRAM SINE Alu 1 161 -15 1723 120 71 32 chr2 203704089 203704398 -49552185 + THE1C LTR MaLR 55 375 0 2197 118 0 0 chr2 203705250 203705547 -49551036 + AluSx SINE Alu 1 297 -15 309 51 0 0 chr2 203705552 203705591 -49550992 + (CA)n Simple_repeat Simple_repeat 2 40 0 2354 84 0 10 chr2 203707188 203707499 -49549084 - AluSc SINE Alu -1 308 1 266 347 10 0 chr2 203707539 203707637 -49548946 + MER5A DNA MER1_type 8 106 -83 190 348 96 0 chr2 203707952 203708087 -49548496 + L2 LINE L2 1890 2037 -1277 569 191 154 7 chr2 203709082 203709218 -49547365 - MER96B DNA MER1_type? -261 156 1 1668 173 17 7 chr2 203709253 203709548 -49547035 + AluJo SINE Alu 1 298 -14 38 0 0 0 chr2 203709590 203709628 -49546955 + AT_rich Low_complexity Low_complexity 1 38 0 324 372 30 6 chr2 203709650 203709814 -49546769 - L1MC/D LINE L1 -2376 5432 5265 398 290 66 27 chr2 203710616 203710799 -49545784 - L1MC/D LINE L1 -1006 5140 4951 1815 49 0 18 chr2 203710810 203711036 -49545547 + AluY SINE Alu 83 304 -7 191 274 143 0 chr2 203711181 203711265 -49545318 + L2 LINE L2 2626 2721 -593 219 326 68 45 chr2 203711345 203711477 -49545106 + L3 LINE CR1 1369 1503 -74 22 56 0 0 chr2 203711525 203711561 -49545022 + AT_rich Low_complexity Low_complexity 1 36 0 1743 164 7 4 chr2 203711774 203712055 -49544528 - AluJb SINE Alu -29 283 2 21 0 0 0 chr2 203712267 203712288 -49544295 + AT_rich Low_complexity Low_complexity 1 21 0 12751 161 31 38 chr2 203713641 203715994 -49540589 - L1M2 LINE L1 -4511 2338 2 326 253 38 0 chr2 203716075 203716154 -49540429 + MER21B LTR ERV1 9 90 -773 333 252 16 0 chr2 203716184 203716299 -49540284 + MER77 LTR ERV1 41 198 -407 966 210 22 6 chr2 203716320 203716501 -49540082 + MER21B LTR ERV1 290 473 -390 1793 127 19 60 chr2 203716507 203716823 -49539760 - MER51B LTR ERV1 -74 303 1 2130 159 15 18 chr2 203716824 203717214 -49539369 - MER51B-int LTR ERV1 0 7816 7428 668 94 10 0 chr2 203717214 203717310 -49539273 - LTR54B LTR ERV1 -399 99 3 2533 100 19 0 chr2 203717310 203717670 -49538913 - MER51B-int LTR ERV1 -389 7148 6782 2078 93 31 0 chr2 203717970 203718261 -49538322 - AluSx SINE Alu -12 300 1 1763 165 54 64 chr2 203718261 203718666 -49537917 + MER21B LTR ERV1 461 861 -2 605 237 61 50 chr2 203719067 203719265 -49537318 + MIR SINE MIR 44 243 -19 388 142 12 178 chr2 203719519 203719645 -49536938 + MLT2B1 LTR ERVL 327 466 -54 531 0 0 0 chr2 203719645 203719704 -49536879 + (TCTA)n Simple_repeat Simple_repeat 3 61 0 388 142 12 178 chr2 203719704 203719752 -49536831 + MLT2B1 LTR ERVL 466 520 0 1543 222 18 3 chr2 203719760 203720098 -49536485 + L1ME2 LINE L1 5485 5827 -339 378 184 11 48 chr2 203720154 203720262 -49536321 + L1ME2 LINE L1 6055 6161 -5 1599 172 42 50 chr2 203720825 203721203 -49535380 - THE1C LTR MaLR 0 375 1 295 218 40 30 chr2 203721393 203721466 -49535117 + MER112 DNA MER1_type 58 134 -126 1874 100 48 138 chr2 203721466 203721866 -49534717 + THE1B LTR MaLR 1 364 0 295 218 40 30 chr2 203721866 203721893 -49534690 + MER112 DNA MER1_type 134 159 -101 182 31 0 62 chr2 203722268 203722300 -49534283 + (TTTTTG)n Simple_repeat Simple_repeat 4 33 0 2134 119 0 10 chr2 203723396 203723699 -49532884 + AluSx SINE Alu 1 300 -12 5558 158 29 12 chr2 203723718 203724071 -49532512 + L1MC1 LINE L1 5315 5660 -673 1849 172 125 10 chr2 203724071 203724455 -49532128 - MSTA LTR MaLR 0 428 1 5558 158 29 12 chr2 203724455 203725098 -49531485 + L1MC1 LINE L1 5660 6333 0 2485 79 0 0 chr2 203726116 203726421 -49530162 - AluY SINE Alu -2 309 5 2045 185 29 22 chr2 203727023 203727434 -49529149 - MLT2D LTR ERVL 0 414 1 1321 201 28 39 chr2 203727751 203728035 -49528548 - AluJb SINE Alu -31 281 1 2313 90 10 0 chr2 203728504 203728804 -49527779 + AluSc SINE Alu 1 303 -6 25 0 0 0 chr2 203729346 203729371 -49527212 + AT_rich Low_complexity Low_complexity 1 25 0 329 182 27 0 chr2 203729374 203729522 -49527061 + (TA)n Simple_repeat Simple_repeat 2 153 0 228 174 0 0 chr2 203729587 203729633 -49526950 - LTR66 LTR ERVL -171 439 394 219 217 0 0 chr2 203729999 203730045 -49526538 + G-rich Low_complexity Low_complexity 1 46 0 465 222 71 0 chr2 203730147 203730246 -49526337 + MER5A DNA MER1_type 44 149 -40 202 319 14 14 chr2 203730395 203730467 -49526116 + MER5A DNA MER1_type 12 83 -106 * 244 338 113 8 chr2 203730414 203730547 -49526036 - MER5A DNA MER1_type -19 170 24 2281 110 3 0 chr2 203731007 203731316 -49525267 - AluSx SINE Alu -1 311 2 675 260 204 0 chr2 203731547 203731743 -49524840 - MIR SINE MIR -15 247 12 210 332 156 37 chr2 203731732 203732027 -49524556 + L2 LINE L2 2135 2464 -850 * 1871 149 0 50 chr2 203732285 203732608 -49523975 + AluJb SINE Alu 1 307 -5 189 74 0 0 chr2 203732749 203732776 -49523807 + (TG)n Simple_repeat Simple_repeat 2 28 0 1626 237 51 24 chr2 203733539 203733815 -49522768 - MLT1C LTR MaLR -1 466 172 4509 106 14 5 chr2 203733815 203734440 -49522143 - L1PA14 LINE L1 -2 6159 5529 1626 237 51 24 chr2 203734440 203734615 -49521968 - MLT1C LTR MaLR -295 172 3 1293 163 103 70 chr2 203734948 203735249 -49521334 - AluSx SINE Alu -1 311 1 243 335 45 52 chr2 203735373 203735528 -49521055 - MIR3 SINE MIR -7 201 48 2153 112 10 3 chr2 203735528 203735824 -49520759 - AluSq SINE Alu -15 298 1 2200 118 3 0 chr2 203736036 203736332 -49520251 + AluSc SINE Alu 5 301 -8 359 315 46 8 chr2 203736640 203736770 -49519813 - L2 LINE L2 0 3313 3179 292 305 102 31 chr2 203737246 203737374 -49519209 - MIR SINE MIR -77 185 49 2076 92 4 0 chr2 203737873 203738145 -49518438 - AluSp SINE Alu -10 303 31 1759 147 14 0 chr2 203738146 203738425 -49518158 + AluJb SINE Alu 17 299 -13 1295 99 0 104 chr2 203738512 203738758 -49517825 - AluY SINE Alu 0 310 88 472 181 43 21 chr2 203738914 203738954 -49517629 + Tigger1 DNA MER2_type 1 39 -2379 2200 117 0 0 chr2 203738954 203739253 -49517330 - AluSx SINE Alu -13 299 1 472 181 43 21 chr2 203739253 203739306 -49517277 + Tigger1 DNA MER2_type 39 96 -2322 998 98 52 58 chr2 203739359 203739533 -49517050 + Tigger1 DNA MER2_type 1524 1696 -722 * 14469 120 29 47 chr2 203739502 203739838 -49516745 + Tigger1 DNA MER2_type 66 407 -2011 2168 129 6 3 chr2 203739838 203740149 -49516434 + AluSx SINE Alu 1 312 0 14469 120 29 47 chr2 203740149 203740650 -49515933 + Tigger1 DNA MER2_type 407 916 -1502 2274 100 10 0 chr2 203740650 203740949 -49515634 + AluSx SINE Alu 1 302 -10 14469 120 29 47 chr2 203740949 203742496 -49514087 + Tigger1 DNA MER2_type 916 2407 -11 2485 268 64 23 chr2 203743302 203744094 -49512489 + L2 LINE L2 2070 2894 -420 2766 177 180 36 chr2 203744100 203744784 -49511799 + LTR1B LTR ERV1 13 794 -32 192 302 163 0 chr2 203744792 203744964 -49511619 + L2 LINE L2 2824 3023 -290 234 0 0 0 chr2 203745011 203745037 -49511546 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1803 138 0 0 chr2 203745037 203745291 -49511292 - AluSx SINE Alu -32 280 27 4692 134 48 39 chr2 203745291 203746648 -49509935 + pTR5 LTR ERV1 744 2438 0 466 171 0 0 chr2 203746699 203746775 -49509808 + Alu SINE Alu 220 295 -16 1462 209 0 43 chr2 203746811 203747137 -49509446 - AluJb SINE Alu 0 312 1 2233 118 0 0 chr2 203747335 203747641 -49508942 - AluSx SINE Alu -6 306 1 2451 90 3 0 chr2 203747663 203747974 -49508609 - AluSp SINE Alu -1 312 1 348 313 61 9 chr2 203748507 203748622 -49507961 + L2 LINE L2 3148 3268 -4 808 169 94 0 chr2 203748766 203748926 -49507657 - L1PA15 LINE L1 0 6165 5991 2101 120 3 0 chr2 203748941 203749233 -49507350 - AluSq SINE Alu -20 293 1 675 146 0 0 chr2 203749233 203749336 -49507247 - L1PA15 LINE L1 -126 6039 5937 248 284 64 9 chr2 203749336 203749445 -49507138 + MIR SINE MIR 148 262 0 1619 206 41 14 chr2 203749541 203749886 -49506697 + MLT1A1 LTR MaLR 12 365 0 2541 197 134 5 chr2 203749886 203750476 -49506107 + MLT1A1-int LTR MaLR 1 666 -1069 25 31 0 0 chr2 203750569 203750601 -49505982 + AT_rich Low_complexity Low_complexity 1 32 0 2162 127 7 0 chr2 203750959 203751259 -49505324 + AluSx SINE Alu 1 302 -10 3044 151 4 8 chr2 203751674 203752176 -49504407 - L1MB4 LINE L1 0 6180 5681 2023 221 51 75 chr2 203752176 203752280 -49504303 - L1MEd LINE L1 -4266 2297 2192 1749 181 0 13 chr2 203752280 203752578 -49504005 - AluJo SINE Alu -18 294 1 2023 221 51 75 chr2 203752578 203752827 -49503756 - L1MEd LINE L1 -4371 2192 1938 2202 205 88 4 chr2 203752827 203753305 -49503278 - MLT2B1 LTR ERVL 0 520 3 2023 221 51 75 chr2 203753305 203753465 -49503118 - L1MEd LINE L1 -4625 1938 1776 805 169 7 29 chr2 203753465 203753601 -49502982 + FLAM_C SINE Alu 1 133 0 2023 221 51 75 chr2 203753601 203753854 -49502729 - L1MEd LINE L1 -4787 1776 1548 1007 174 23 0 chr2 203753857 203754029 -49502554 - AluJb SINE Alu -20 292 117 292 217 178 8 chr2 203754031 203754155 -49502428 - L1MEd LINE L1 -4901 1471 1265 * 2504 260 20 24 chr2 203754151 203754851 -49501732 - L1MEd LINE L1 -5663 900 204 610 318 31 28 chr2 203754979 203755234 -49501349 + MIR SINE MIR 1 256 -6 1387 195 0 0 chr2 203755267 203755503 -49501080 - AluJb SINE Alu -76 236 1 684 240 188 0 chr2 203756984 203757192 -49499391 + MIR SINE MIR 1 247 -15 401 261 36 41 chr2 203757270 203757412 -49499171 - MIR SINE MIR -63 145 17 200 233 0 0 chr2 203759263 203759306 -49497277 + T-rich Low_complexity Low_complexity 1 43 0 299 311 0 10 chr2 203760462 203760565 -49496018 - MIR3 SINE MIR -10 198 97 339 25 0 0 chr2 203760695 203760735 -49495848 + (TG)n Simple_repeat Simple_repeat 1 40 0 192 97 0 0 chr2 203760735 203760766 -49495817 + (GA)n Simple_repeat Simple_repeat 2 32 0 302 273 70 56 chr2 203761383 203761526 -49495057 + MIR SINE MIR 80 224 -38 3288 216 80 9 chr2 203761601 203762491 -49494092 + L1ME1 LINE L1 5218 6162 -4 333 275 58 33 chr2 203762736 203762856 -49493727 - MLT1K LTR MaLR -326 262 140 2252 93 3 3 chr2 203763456 203763747 -49492836 - AluSg1 SINE Alu -18 291 1 8124 41 4 1 chr2 203764052 203770144 -49486439 - L1PA3 LINE L1 0 6155 1 21 0 0 0 chr2 203770561 203770582 -49486001 + AT_rich Low_complexity Low_complexity 1 21 0 3329 161 24 34 chr2 203771828 203772449 -49484134 - LTR35 LTR ERV1 -3 615 1 1991 102 0 32 chr2 203772544 203772827 -49483756 - AluSx SINE Alu -1 311 38 1855 132 8 92 chr2 203772864 203772911 -49483672 - MER4B LTR ERV1 0 610 561 1594 187 0 24 chr2 203772911 203773205 -49483378 - AluJo SINE Alu -25 287 1 1855 132 8 92 chr2 203773205 203773527 -49483056 - MER4B LTR ERV1 -49 561 272 2293 101 0 3 chr2 203773527 203773825 -49482758 - AluSx SINE Alu -15 297 1 340 250 70 52 chr2 203774362 203774534 -49482049 + MIR SINE MIR 34 208 -54 1199 150 0 42 chr2 203774749 203774962 -49481621 + AluJb SINE Alu 85 288 -24 1371 194 57 14 chr2 203775153 203775436 -49481147 - AluJb SINE Alu -17 295 1 1838 214 113 20 chr2 203775720 203776178 -49480405 + MLT1E2 LTR MaLR 1 501 -125 6296 113 166 55 chr2 203776178 203777626 -49478957 - pTR5 LTR ERV1 -1 2437 767 550 221 30 17 chr2 203777626 203777777 -49478806 + MLT1E2 LTR MaLR 378 618 -8 2409 88 3 0 chr2 203777780 203778085 -49478498 + AluSp SINE Alu 1 306 -7 2057 218 25 40 chr2 203778389 203778917 -49477666 - L1ME3 LINE L1 -45 6117 5598 23 54 0 0 chr2 203778970 203779007 -49477576 + AT_rich Low_complexity Low_complexity 1 37 0 762 100 0 0 chr2 203779012 203779112 -49477471 - U6 snRNA snRNA -7 100 1 21 40 0 40 chr2 203779120 203779151 -49477432 + AT_rich Low_complexity Low_complexity 1 31 -17 1842 123 51 0 chr2 203779151 203779427 -49477156 - AluSx SINE Alu -22 290 1 21 40 0 40 chr2 203779427 203779445 -49477138 + AT_rich Low_complexity Low_complexity 31 48 0 1447 187 70 21 chr2 203780359 203780686 -49475897 - MLT2D LTR ERVL 0 414 64 925 177 17 95 chr2 203780899 203781131 -49475452 + MER20 DNA MER1_type 6 219 0 185 0 40 0 chr2 203782310 203782335 -49474248 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 2283 263 157 30 chr2 203782575 203782719 -49473864 - L2 LINE L2 -710 2604 2480 1940 163 0 3 chr2 203782719 203783026 -49473557 + AluJb SINE Alu 1 306 -6 2283 263 157 30 chr2 203783026 203783918 -49472665 - L2 LINE L2 -834 2480 1436 433 198 88 11 chr2 203784005 203784096 -49472487 - MER5B DNA MER1_type -5 173 76 787 316 120 3 chr2 203784278 203784594 -49471989 - LTR16A LTR ERVL -4 446 94 3003 182 71 60 chr2 203785054 203785773 -49470810 + LTR8A LTR ERV1 1 727 0 2425 80 3 0 chr2 203786559 203786861 -49469722 - AluSp SINE Alu -10 303 1 1374 179 73 7 chr2 203787637 203788096 -49468487 - MER34 LTR ERV1 0 542 11 756 189 71 94 chr2 203788187 203788399 -49468184 - MER3 DNA MER1_type -1 208 2 2103 121 3 13 chr2 203788475 203788773 -49467810 + AluSx SINE Alu 1 295 -17 236 178 44 0 chr2 203788892 203788937 -49467646 - Tigger2 DNA MER2_type -2670 48 2 28 29 0 0 chr2 203788983 203789018 -49467565 + AT_rich Low_complexity Low_complexity 1 35 0 841 101 47 16 chr2 203789018 203789147 -49467436 + FLAM_C SINE Alu 1 133 0 2176 84 3 3 chr2 203789178 203789485 -49467098 - AluSx SINE Alu 0 307 1 2120 108 7 7 chr2 203790148 203790443 -49466140 - AluSq SINE Alu -18 295 1 21 107 0 0 chr2 203790937 203791021 -49465562 + AT_rich Low_complexity Low_complexity 1 84 0 2367 97 3 3 chr2 203791236 203791545 -49465038 + AluSx SINE Alu 1 309 -3 934 269 146 0 chr2 203791546 203791854 -49464729 - L1MC4a LINE L1 -1943 5865 5513 5569 63 35 61 chr2 203792608 203793497 -49463086 + SVA Other Other 1 866 -520 597 52 15 37 chr2 203793515 203793649 -49462934 + SVA Other Other 664 794 -592 6729 64 12 34 chr2 203793663 203794679 -49461904 + SVA Other Other 433 1427 0 2379 62 14 0 chr2 203796328 203796617 -49459966 + AluY SINE Alu 1 293 -18 549 30 0 0 chr2 203796617 203796684 -49459899 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 208 238 12 107 chr2 203796775 203796859 -49459724 - MIR3 SINE MIR -3 205 130 382 243 143 21 chr2 203797129 203797269 -49459314 + MIR SINE MIR 41 197 -65 199 282 47 35 chr2 203797647 203797732 -49458851 - L2 LINE L2 -6 3307 3222 253 365 73 21 chr2 203797833 203798066 -49458517 - MLT1L LTR MaLR -18 597 353 238 275 46 46 chr2 203798118 203798155 -49458428 - MLT1K LTR MaLR -289 299 263 1735 180 0 3 chr2 203798155 203798466 -49458117 + AluJo SINE Alu 1 310 -2 238 275 46 46 chr2 203798466 203798559 -49458024 - MLT1K LTR MaLR -324 264 169 1828 101 90 7 chr2 203799488 203799765 -49456818 + AluSx SINE Alu 1 300 -12 819 197 0 0 chr2 203800050 203800187 -49456396 - FLAM_A SINE Alu 0 142 6 374 114 13 0 chr2 203801000 203801079 -49455504 + (TA)n Simple_repeat Simple_repeat 2 81 0 439 59 15 15 chr2 203802506 203802574 -49454009 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 957 138 0 0 chr2 203802937 203803067 -49453516 + FLAM_C SINE Alu 1 130 -3 1242 89 6 6 chr2 203803850 203804018 -49452565 + L1PA10 LINE L1 6001 6168 0 2147 62 44 7 chr2 203804035 203804360 -49452223 - AluY SINE Alu 0 335 1 23 0 0 0 chr2 203804360 203804383 -49452200 + AT_rich Low_complexity Low_complexity 1 23 0 36 62 0 0 chr2 203804529 203804593 -49451990 + AT_rich Low_complexity Low_complexity 1 64 0 1225 177 19 5 chr2 203804685 203804900 -49451683 - AluJo SINE Alu -94 218 1 436 138 50 0 chr2 203804987 203805067 -49451516 + L1PA8 LINE L1 6088 6171 -1 253 234 9 19 chr2 203806099 203806206 -49450377 + GA-rich Low_complexity Low_complexity 3 108 0 2012 138 7 0 chr2 203806309 203806649 -49449934 + AluSx SINE Alu 1 342 0 1256 167 0 34 chr2 203807073 203807312 -49449271 + AluJo SINE Alu 82 312 0 1136 115 92 0 chr2 203809703 203809877 -49446706 - AluJb SINE Alu -23 289 100 26 0 0 0 chr2 203809884 203809910 -49446673 + AT_rich Low_complexity Low_complexity 1 26 0 828 161 0 56 chr2 203809993 203810136 -49446447 + AluJo SINE Alu 2 136 -176 21 57 0 0 chr2 203810136 203810171 -49446412 + AT_rich Low_complexity Low_complexity 1 35 0 442 272 32 8 chr2 203810281 203810406 -49446177 + MIR SINE MIR 120 247 -15 2080 99 31 10 chr2 203810431 203810723 -49445860 + AluSx SINE Alu 1 298 -14 188 254 18 36 chr2 203810779 203810834 -49445749 + L2 LINE L2 2732 2785 -529 1887 139 34 17 chr2 203811055 203811349 -49445234 + AluSx SINE Alu 1 299 -13 306 0 0 0 chr2 203812635 203812669 -49443914 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1836 120 0 22 chr2 203812672 203812939 -49443644 - AluSx SINE Alu -31 281 21 1720 160 3 20 chr2 203813395 203813689 -49442894 + AluJb SINE Alu 1 289 -23 207 125 0 0 chr2 203814423 203814463 -49442120 + (A)n Simple_repeat Simple_repeat 1 40 0 28 0 0 0 chr2 203814473 203814501 -49442082 + AT_rich Low_complexity Low_complexity 1 28 0 1942 125 7 7 chr2 203814502 203814790 -49441793 - AluSx SINE Alu -24 288 1 29 0 0 0 chr2 203815057 203815086 -49441497 + AT_rich Low_complexity Low_complexity 1 29 0 934 124 0 7 chr2 203815095 203815232 -49441351 - AluSg/x SINE Alu -22 288 153 341 193 0 0 chr2 203815237 203815294 -49441289 - AluS SINE Alu -246 57 1 23 54 0 0 chr2 203816042 203816079 -49440504 + AT_rich Low_complexity Low_complexity 1 37 0 925 178 0 68 chr2 203816609 203816800 -49439783 - AluJ SINE Alu -14 298 121 2175 93 7 3 chr2 203816823 203817112 -49439471 - AluSp SINE Alu -23 290 1 804 180 31 0 chr2 203817115 203817243 -49439340 - AluJ SINE Alu -178 134 3 681 189 9 0 chr2 203817861 203817972 -49438611 + FLAM_A SINE Alu 4 115 -18 345 24 0 0 chr2 203817978 203818020 -49438563 + (CA)n Simple_repeat Simple_repeat 2 43 0 570 81 20 20 chr2 203818949 203819048 -49437535 + (TTTC)n Simple_repeat Simple_repeat 2 100 0 1447 203 52 0 chr2 203819102 203819388 -49437195 + MER58B DNA MER1_type 10 310 -31 2405 73 0 10 chr2 203819388 203819690 -49436893 + AluSq SINE Alu 1 299 -14 199 0 31 31 chr2 203820429 203820461 -49436122 + (CAAA)n Simple_repeat Simple_repeat 4 35 0 5374 170 27 2 chr2 203820752 203821627 -49434956 + MER54A LTR ERVL 5 901 0 714 257 115 15 chr2 203823184 203823408 -49433175 - L1M4 LINE L1 -2944 3202 2931 1305 176 117 15 chr2 203823408 203823681 -49432902 - AluSg SINE Alu -9 301 1 714 257 115 15 chr2 203823681 203823795 -49432788 - L1M4 LINE L1 -3215 2931 2830 752 210 37 103 chr2 203823834 203823904 -49432679 - MER39 LTR ERV1 -25 682 609 1649 148 4 4 chr2 203823904 203824161 -49432422 + AluJo SINE Alu 48 304 -8 752 210 37 103 chr2 203824161 203824362 -49432221 - MER39 LTR ERV1 -98 609 429 252 284 209 8 chr2 203824360 203824494 -49432089 - MER34 LTR ERV1 -377 165 5 * 501 278 31 5 chr2 203824495 203824689 -49431894 - L1M4 LINE L1 -3332 2814 2616 295 171 200 0 chr2 203824695 203824765 -49431818 + L2 LINE L2 3230 3313 0 189 0 0 0 chr2 203825105 203825126 -49431457 + (A)n Simple_repeat Simple_repeat 1 21 0 3103 65 0 0 chr2 203825146 203825517 -49431066 - L1PA8 LINE L1 0 6172 5802 2388 101 0 16 chr2 203825933 203826250 -49430333 - AluSx SINE Alu 0 312 1 2298 106 3 3 chr2 203827161 203827473 -49429110 + AluSq SINE Alu 1 312 -1 900 135 0 0 chr2 203827662 203827788 -49428795 + FLAM_C SINE Alu 1 126 -17 293 274 78 49 chr2 203827836 203827938 -49428645 - MER91A DNA MER1_type 0 196 92 191 321 0 0 chr2 203828189 203828245 -49428338 + L2 LINE L2 3013 3068 -245 2364 46 14 0 chr2 203828258 203828565 -49428018 - AluY SINE Alu 0 311 1 305 317 0 0 chr2 203828652 203828734 -49427849 + L2 LINE L2 3191 3272 0 551 285 4 88 chr2 203828952 203829180 -49427403 - MIR SINE MIR -34 228 20 1819 159 14 3 chr2 203829623 203829906 -49426677 + AluJb SINE Alu 1 286 -26 242 179 18 0 chr2 203829906 203829962 -49426621 + (TA)n Simple_repeat Simple_repeat 1 57 0 2568 157 9 2 chr2 203829962 203830394 -49426189 - L1M2 LINE L1 -581 5710 5276 295 357 49 22 chr2 203833387 203833442 -49423141 + MIR SINE MIR 29 81 -181 1642 189 7 7 chr2 203833442 203833744 -49422839 - AluJb SINE Alu 0 312 11 295 357 49 22 chr2 203833744 203833873 -49422710 + MIR SINE MIR 81 218 -44 423 275 42 6 chr2 203834915 203835082 -49421501 - L1ME3 LINE L1 -1 6161 5989 278 236 94 0 chr2 203835124 203835265 -49421318 - L1ME3 LINE L1 -323 5839 5695 1101 105 0 0 chr2 203835420 203835573 -49421010 + AluSg/x SINE Alu 150 302 -10 192 200 0 0 chr2 203835609 203835649 -49420934 + GA-rich Low_complexity Low_complexity 3 42 0 23 0 0 0 chr2 203835674 203835697 -49420886 + AT_rich Low_complexity Low_complexity 1 23 0 212 179 0 0 chr2 203836241 203836280 -49420303 + T-rich Low_complexity Low_complexity 1 39 0 2096 124 3 3 chr2 203836297 203836596 -49419987 + AluSx SINE Alu 1 299 -13 767 130 0 0 chr2 203836596 203836704 -49419879 - AluJo/FLAM SINE Alu -196 116 9 2198 86 10 14 chr2 203837452 203837742 -49418841 + AluSc SINE Alu 1 289 -20 216 308 0 0 chr2 203839368 203839420 -49417163 + L2 LINE L2 3251 3302 -11 1571 189 23 23 chr2 203839952 203840258 -49416325 + AluJb SINE Alu 1 306 -6 476 246 179 0 chr2 203840355 203840489 -49416094 - MER5A DNA MER1_type -6 183 26 * 532 189 5 168 chr2 203840488 203840511 -49416072 - MER5B DNA MER1_type -22 156 131 737 182 0 8 chr2 203840511 203840643 -49415940 - FLAM_C SINE Alu -2 131 1 532 189 5 168 chr2 203840643 203840804 -49415779 - MER5B DNA MER1_type -47 131 2 1929 114 4 0 chr2 203841173 203841435 -49415148 - AluSx SINE Alu -49 263 1 268 157 78 113 chr2 203841452 203841478 -49415105 - L1ME3 LINE L1 -2361 5447 5422 216 0 0 0 chr2 203841478 203841502 -49415081 + (ATTG)n Simple_repeat Simple_repeat 2 25 0 2267 95 0 0 chr2 203841502 203841785 -49414798 - AluSc SINE Alu -26 283 1 268 157 78 113 chr2 203841785 203841816 -49414767 - L1ME3 LINE L1 -2385 5423 5392 2057 68 8 0 chr2 203841816 203842081 -49414502 - AluY SINE Alu -44 267 1 268 157 78 113 chr2 203842081 203842136 -49414447 - L1ME3 LINE L1 -2416 5392 5337 2215 55 0 7 chr2 203842505 203842776 -49413807 - AluSp SINE Alu -44 269 1 1437 185 89 0 chr2 203843013 203843283 -49413300 - AluJb SINE Alu -18 294 1 632 250 202 11 chr2 203845657 203845929 -49410654 - L2 LINE L2 -1 3312 2989 919 296 48 75 chr2 203845982 203846307 -49410276 + L2 LINE L2 2155 2464 -850 2191 89 13 30 chr2 203846307 203846610 -49409973 + AluY SINE Alu 2 299 -12 919 296 48 75 chr2 203846610 203846767 -49409816 + L2 LINE L2 2464 2624 -690 1565 171 25 32 chr2 203846943 203847224 -49409359 - AluJo SINE Alu -22 290 12 285 29 0 0 chr2 203847303 203847337 -49409246 + (TG)n Simple_repeat Simple_repeat 1 34 0 25 0 0 0 chr2 203847344 203847369 -49409214 + AT_rich Low_complexity Low_complexity 1 25 0 1274 198 143 0 chr2 203847400 203847906 -49408677 - MER21B LTR ERV1 -264 599 1 2124 107 11 0 chr2 203848106 203848387 -49408196 + AluSx SINE Alu 1 284 -28 210 105 0 0 chr2 203848387 203848425 -49408158 + (TA)n Simple_repeat Simple_repeat 2 39 0 23 33 0 0 chr2 203848455 203848485 -49408098 + AT_rich Low_complexity Low_complexity 1 30 0 2012 142 0 14 chr2 203849092 203849388 -49407195 - AluJb SINE Alu -16 296 5 2296 88 3 28 chr2 203849490 203849807 -49406776 - AluSx SINE Alu -3 309 1 1464 200 137 87 chr2 203850479 203851195 -49405388 - LTR1B LTR ERV1 -74 752 1 23 0 0 0 chr2 203851588 203851611 -49404972 + AT_rich Low_complexity Low_complexity 1 23 0 795 253 153 43 chr2 203851817 203851965 -49404618 - MLT1L LTR MaLR 0 615 485 2052 134 0 3 chr2 203851965 203852289 -49404294 + AluSx SINE Alu 1 323 0 795 253 153 43 chr2 203852289 203852558 -49404025 - MLT1L LTR MaLR -130 485 151 807 198 114 20 chr2 203852566 203852768 -49403815 + Charlie1a DNA MER1_type 17 237 -1218 2441 189 223 25 chr2 203852806 203853661 -49402922 + Charlie1a DNA MER1_type 385 1409 -46 2381 63 0 13 chr2 203853669 203853970 -49402613 + AluY SINE Alu 1 297 -14 803 111 0 0 chr2 203853978 203854086 -49402497 + AluJb SINE Alu 26 133 -179 269 140 20 0 chr2 203854086 203854136 -49402447 + Charlie1a DNA MER1_type 1401 1451 -4 * 276 274 61 55 chr2 203854133 203854297 -49402286 - MLT1L LTR MaLR -450 165 1 296 346 74 44 chr2 203854877 203855308 -49401275 - L2 LINE L2 -927 2387 1944 25 65 0 0 chr2 203855328 203855374 -49401209 + AT_rich Low_complexity Low_complexity 1 46 0 823 161 0 0 chr2 203855374 203855492 -49401091 - FLAM_C SINE Alu -15 118 1 3941 163 44 41 chr2 203855513 203855534 -49401049 - L1MC3 LINE L1 -7 7778 7759 2343 87 7 13 chr2 203855534 203855843 -49400740 - AluSx SINE Alu -5 307 1 3941 163 44 41 chr2 203855843 203856152 -49400431 - L1MC3 LINE L1 -26 7759 7453 1767 174 20 0 chr2 203856152 203856451 -49400132 - AluJo SINE Alu -7 305 1 3941 163 44 41 chr2 203856451 203856780 -49399803 - L1MC3 LINE L1 -332 7453 7112 1795 144 60 0 chr2 203856780 203857064 -49399519 - AluSg SINE Alu -9 301 1 3941 163 44 41 chr2 203857064 203857306 -49399277 - L1MC3 LINE L1 -673 7112 6872 438 306 95 90 chr2 203858172 203858571 -49398012 - L2 LINE L2 -7 3265 2865 1245 182 80 13 chr2 203858580 203858882 -49397701 - MER33 DNA MER1_type -2 322 1 2249 110 0 19 chr2 203858882 203859191 -49397392 - AluSx SINE Alu -9 303 1 233 305 228 13 chr2 203859234 203859467 -49397116 - L2 LINE L2 -482 2832 2550 261 246 62 0 chr2 203859751 203859816 -49396767 - L2 LINE L2 -1083 2231 2163 399 284 31 49 chr2 203859820 203859982 -49396601 - MER5A DNA MER1_type 0 189 31 23 33 0 0 chr2 203860687 203860717 -49395866 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr2 203861341 203861364 -49395219 + AT_rich Low_complexity Low_complexity 1 23 0 1809 160 3 38 chr2 203861415 203861536 -49395047 + AluJo SINE Alu 3 127 -185 2524 61 3 0 chr2 203861536 203861833 -49394750 - AluSg SINE Alu -8 302 5 1809 160 3 38 chr2 203861833 203862029 -49394554 + AluJo SINE Alu 127 309 -3 2337 64 3 0 chr2 203862089 203862407 -49394176 - AluSp SINE Alu 0 319 1 21 0 0 0 chr2 203862417 203862438 -49394145 + AT_rich Low_complexity Low_complexity 1 21 0 1171 138 9 31 chr2 203862733 203862958 -49393625 - L1MB4 LINE L1 -129 6051 5832 23 0 0 0 chr2 203863002 203863025 -49393558 + AT_rich Low_complexity Low_complexity 1 23 0 1837 144 7 21 chr2 203863156 203863441 -49393142 - AluJb SINE Alu -27 285 5 23 0 0 0 chr2 203863449 203863472 -49393111 + AT_rich Low_complexity Low_complexity 1 23 0 1047 201 59 0 chr2 203863590 203863809 -49392774 - MLT1D LTR MaLR 0 505 274 1797 127 40 22 chr2 203863835 203864159 -49392424 + MER1B DNA MER1_type 10 339 0 608 225 4 98 chr2 203864207 203864451 -49392132 - MLT1D LTR MaLR -283 222 2 219 325 61 18 chr2 203864677 203864791 -49391792 + L2 LINE L2 2928 3046 -226 252 0 0 0 chr2 203864893 203864921 -49391662 + (CCA)n Simple_repeat Simple_repeat 3 30 0 1236 213 11 24 chr2 203865209 203865496 -49391087 - AluJo SINE Alu -29 283 1 1954 154 0 13 chr2 203865596 203865901 -49390682 + AluJb SINE Alu 1 301 -11 601 211 261 6 chr2 203865909 203866089 -49390494 + MIR SINE MIR 6 231 -31 1419 102 0 0 chr2 203867316 203867512 -49389071 + AluY SINE Alu 116 311 0 690 145 0 26 chr2 203868162 203868279 -49388304 + AluJb SINE Alu 177 290 -22 1549 185 121 11 chr2 203869388 203869836 -49386747 - LTR54B LTR ERV1 -1 497 1 2156 127 0 0 chr2 203871626 203871917 -49384666 - AluSx SINE Alu -21 291 1 1875 127 17 35 chr2 203872025 203872371 -49384212 - MER4E LTR ERV1 -5 774 435 3132 198 60 6 chr2 203872485 203873909 -49382674 - L1M4 LINE L1 -2803 3579 2070 2319 136 48 13 chr2 203873905 203874360 -49382223 - L1M4 LINE L1 -4592 1792 1322 * 1651 109 5 0 chr2 203874462 203874683 -49381900 + AluSp SINE Alu 82 303 -10 426 181 3 0 chr2 203875330 203875486 -49381097 + MER58B DNA MER1_type 197 316 -25 205 244 0 0 chr2 203875848 203875893 -49380690 + L2 LINE L2 2297 2341 -973 281 247 94 0 chr2 203875940 203876025 -49380558 + L2 LINE L2 2665 2757 -557 322 233 12 116 chr2 203876195 203876367 -49380216 - L1ME LINE L1 -359 5762 5609 494 296 155 33 chr2 203876675 203877037 -49379546 - L2 LINE L2 -70 3243 2838 320 273 40 53 chr2 203877506 203877656 -49378927 + MLT1J2 LTR MaLR 75 222 -228 1656 168 10 30 chr2 203877900 203878203 -49378380 - AluJo SINE Alu -15 297 1 1395 157 101 19 chr2 203878960 203879228 -49377355 - AluJb SINE Alu -22 290 1 567 243 81 29 chr2 203879367 203879540 -49377043 - MER5A DNA MER1_type -7 182 1 370 272 112 47 chr2 203879776 203880008 -49376575 - L1MC4a LINE L1 -139 5982 5734 2287 105 7 0 chr2 203880041 203880346 -49376237 - AluSq SINE Alu -6 307 1 2110 134 63 10 chr2 203880424 203880818 -49375765 - Tigger3(Golem) DNA MER2_type -1 3028 2614 22 35 0 0 chr2 203880964 203880993 -49375590 + AT_rich Low_complexity Low_complexity 1 29 0 282 189 111 11 chr2 203881082 203881172 -49375411 + MLT1L LTR MaLR 496 594 -21 2155 93 14 3 chr2 203881211 203881501 -49375082 - AluY SINE Alu -18 293 1 338 289 78 44 chr2 203881544 203881724 -49374859 - L1MC4a LINE L1 -513 5651 5466 946 130 0 52 chr2 203881969 203882123 -49374460 - AluSg/x SINE Alu -30 282 137 448 263 52 17 chr2 203882130 203882362 -49374221 - L1MC4a LINE L1 -945 5201 4962 479 323 101 40 chr2 203882402 203882780 -49373803 - L1MC4a LINE L1 -1328 4818 4418 310 254 105 0 chr2 203882853 203882967 -49373616 - L1ME3A LINE L1 -5 6165 6040 1154 111 0 6 chr2 203883784 203883955 -49372628 - L1PA16 LINE L1 0 6166 5997 28 0 0 0 chr2 203884645 203884673 -49371910 + AT_rich Low_complexity Low_complexity 1 28 0 296 278 35 49 chr2 203884694 203884838 -49371745 + L1ME LINE L1 5529 5670 -451 1471 137 50 77 chr2 203884892 203885033 -49371550 + AluJo SINE Alu 1 144 -168 2032 92 36 7 chr2 203885033 203885314 -49371269 + AluSx SINE Alu 1 289 -23 1471 137 50 77 chr2 203885314 203885472 -49371111 + AluJo SINE Alu 144 292 -20 645 223 137 64 chr2 203885590 203886044 -49370539 - HAL1 LINE L1 0 2507 2021 1552 169 11 11 chr2 203886488 203886754 -49369829 - AluJb SINE Alu -46 266 1 211 157 78 20 chr2 203887683 203887734 -49368849 - MIR SINE MIR -95 167 114 364 295 52 45 chr2 203887915 203888117 -49368466 - MIR SINE MIR -59 203 4 223 154 39 0 chr2 203888677 203888729 -49367854 + T-rich Low_complexity Low_complexity 2 55 0 1981 87 42 0 chr2 203888820 203889084 -49367499 + AluSq SINE Alu 28 302 -11 29 0 0 0 chr2 203889617 203889646 -49366937 + AT_rich Low_complexity Low_complexity 1 29 0 823 149 0 8 chr2 203889708 203889842 -49366741 + FLAM_C SINE Alu 1 133 0 2203 114 0 0 chr2 203889871 203890168 -49366415 + AluSc SINE Alu 1 297 -12 646 121 100 0 chr2 203890226 203890366 -49366217 - L1MA8 LINE L1 0 6291 6138 605 202 0 0 chr2 203890367 203890471 -49366112 - U6 snRNA snRNA -3 104 1 744 189 94 0 chr2 203890615 203890795 -49365788 + L1MD3 LINE L1 7783 7979 -16 626 266 16 10 chr2 203890912 203891104 -49365479 - L1ME3A LINE L1 -3 6167 5975 1671 168 36 3 chr2 203891394 203891727 -49364856 + L1MB3 LINE L1 3910 4253 -1893 307 179 36 0 chr2 203891731 203891787 -49364796 + MER50 LTR ERV1 499 556 -178 1008 167 43 13 chr2 203891830 203892063 -49364520 + L1MB3 LINE L1 4233 4472 -1674 * 1384 106 44 1 chr2 203892059 203892324 -49364259 - L1P4 LINE L1 -695 5466 5191 1012 133 43 5 chr2 203892328 203892516 -49364067 + L1PA13 LINE L1 5965 6159 -4 471 128 23 0 chr2 203892526 203892612 -49363971 + L1MB3 LINE L1 4456 4543 -1603 739 230 7 7 chr2 203892612 203892764 -49363819 + MER2 DNA MER2_type 1 152 -193 1064 119 0 90 chr2 203892765 203892966 -49363617 + Tigger2a DNA MER2_type 2 184 -250 353 179 0 0 chr2 203893002 203893058 -49363525 + MER50 LTR ERV1 499 554 -180 1278 151 42 25 chr2 203893133 203893371 -49363212 + Tigger2a DNA MER2_type 203 444 0 355 251 174 12 chr2 203893373 203893540 -49363043 + MER2 DNA MER2_type 152 345 0 2497 200 20 43 chr2 203893540 203894196 -49362387 + L1MB3 LINE L1 4542 5182 -964 995 147 37 0 chr2 203894206 203894397 -49362186 + L1PB1 LINE L1 3 200 -6663 * 3581 148 262 17 chr2 203894389 203894772 -49361811 + L1PB1 LINE L1 625 913 -5950 1493 212 17 23 chr2 203894772 203895117 -49361466 + MER61A LTR ERV1 1 343 0 3581 148 262 17 chr2 203895117 203895539 -49361044 + L1PB1 LINE L1 913 1627 -5236 12521 166 23 7 chr2 203895542 203899090 -49357493 + L1PB1 LINE L1 3258 6865 -2 4713 165 27 16 chr2 203899100 203899745 -49356838 + L1MB3 LINE L1 5175 5832 -351 2307 104 10 0 chr2 203899745 203900054 -49356529 - AluSx SINE Alu 0 312 1 4713 165 27 16 chr2 203900054 203900406 -49356177 + L1MB3 LINE L1 5832 6179 -4 244 127 18 0 chr2 203900413 203900468 -49356115 + L1MB3 LINE L1 6127 6182 -1 1491 181 7 46 chr2 203900517 203900821 -49355762 - AluJb SINE Alu -20 292 1 395 207 76 25 chr2 203901391 203901427 -49355156 + L1ME3A LINE L1 5264 5297 -869 2416 80 7 0 chr2 203901427 203901727 -49354856 - AluSx SINE Alu -10 302 1 395 207 76 25 chr2 203901727 203901848 -49354735 + L1ME3A LINE L1 5297 5430 -736 335 58 0 0 chr2 203901848 203901900 -49354683 + L1MA7 LINE L1 6222 6273 -18 395 207 76 25 chr2 203901900 203901911 -49354672 + L1ME3A LINE L1 5430 5439 -727 2325 88 7 0 chr2 203902564 203902859 -49353724 - AluSg SINE Alu -13 297 1 647 223 0 16 chr2 203902970 203903091 -49353492 - AluJb SINE Alu -193 119 1 1908 111 34 37 chr2 203903100 203903398 -49353185 - AluSc SINE Alu -12 297 1 27 49 0 0 chr2 203903634 203903675 -49352908 + AT_rich Low_complexity Low_complexity 1 41 0 297 335 31 45 chr2 203904835 203905042 -49351541 - MIR SINE MIR -57 151 3 293 270 46 32 chr2 203906037 203906230 -49350353 + MIR SINE MIR 2 252 -10 485 341 74 0 chr2 203906254 203906471 -49350112 + L3 LINE CR1 431 663 -914 860 277 61 63 chr2 203906704 203907098 -49349485 - L2 LINE L2 0 3313 2921 464 312 140 23 chr2 203907190 203907539 -49349044 + L3 LINE CR1 716 1105 -472 351 0 0 0 chr2 203907790 203907829 -49348754 + (TG)n Simple_repeat Simple_repeat 2 40 0 366 349 163 0 chr2 203907869 203908127 -49348456 + L1ME3A LINE L1 5657 5956 -214 182 138 69 0 chr2 203908129 203908187 -49348396 + (TA)n Simple_repeat Simple_repeat 2 63 0 234 178 151 14 chr2 203908305 203908378 -49348205 + L1MC4 LINE L1 6636 6718 -1324 192 296 165 26 chr2 203908764 203908879 -49347704 + L2 LINE L2 3171 3301 -12 297 276 200 16 chr2 203909575 203909825 -49346758 - HAL1 LINE L1 -760 1747 1452 2242 114 0 0 chr2 203910296 203910593 -49345990 - AluSx SINE Alu -15 297 1 189 271 97 69 chr2 203912811 203912955 -49343628 + L2 LINE L2 1888 2035 -1279 240 311 41 25 chr2 203912961 203913083 -49343500 + L2 LINE L2 2167 2290 -1024 1751 183 47 26 chr2 203913564 203913946 -49342637 + MLT1B LTR MaLR 1 390 0 3125 219 91 18 chr2 203914034 203914921 -49341662 - L1MD2 LINE L1 0 7808 6236 696 231 50 84 chr2 203914922 203915221 -49341362 - MLT1D LTR MaLR -216 289 1 1878 186 32 7 chr2 203915221 203915629 -49340954 - L1MC4a LINE L1 -1228 6580 6163 309 280 42 70 chr2 203915933 203916076 -49340507 + MER102a DNA MER1_type 192 330 0 376 183 0 14 chr2 203916119 203916190 -49340393 + Tigger4(Zombi) DNA MER2_type 2662 2731 0 1724 55 9 23 chr2 203916219 203916438 -49340145 - AluY SINE Alu -11 300 85 535 261 51 28 chr2 203916479 203916655 -49339928 - MIR SINE MIR -30 232 53 307 321 87 33 chr2 203916732 203916916 -49339667 + HAL1 LINE L1 1035 1228 -1279 268 198 12 25 chr2 203917352 203917433 -49339150 + GA-rich Low_complexity Low_complexity 1 80 0 1629 207 50 13 chr2 203917434 203917816 -49338767 + MER63B DNA MER1_type 41 436 0 2346 100 3 0 chr2 203917899 203918200 -49338383 - AluSx SINE Alu -10 302 1 1619 168 16 1 chr2 203918896 203919234 -49337349 + Tigger4(Zombi) DNA MER2_type 1 2731 0 1407 176 3 72 chr2 203919744 203920062 -49336521 - AluJb SINE Alu -3 309 14 5738 121 40 3 chr2 203920101 203921054 -49335529 - L1PA16 LINE L1 -9 6157 5170 251 333 46 9 chr2 203921212 203921320 -49335263 - L2 LINE L2 -5 3308 3197 295 343 17 51 chr2 203921638 203921715 -49334868 - MIR3 SINE MIR -10 198 120 2410 58 3 7 chr2 203921715 203922006 -49334577 + AluY SINE Alu 3 292 -19 295 343 17 51 chr2 203922006 203922103 -49334480 - MIR3 SINE MIR -88 120 30 317 302 129 72 chr2 203922129 203922378 -49334205 + L2 LINE L2 2831 3115 -157 2103 141 47 11 chr2 203922378 203922740 -49333843 + THE1C LTR MaLR 1 375 0 317 302 129 72 chr2 203922740 203922907 -49333676 + L2 LINE L2 3115 3271 -1 1620 174 2 98 chr2 203923756 203924153 -49332430 + MLT1B LTR MaLR 32 390 0 382 227 31 10 chr2 203925458 203925555 -49331028 - LTR67 LTR ERVL -1 556 458 327 49 0 0 chr2 203925818 203925859 -49330724 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 818 116 0 41 chr2 203926050 203926171 -49330412 + AluJb SINE Alu 3 118 -194 692 202 0 0 chr2 203926484 203926608 -49329975 + FLAM_C SINE Alu 1 124 -19 181 370 115 6 chr2 203927133 203927298 -49329285 - L2 LINE L2 -221 3051 2869 237 270 202 0 chr2 203927665 203927738 -49328845 + MLT1K LTR MaLR 154 244 -344 1247 179 90 36 chr2 203927738 203928109 -49328474 - Tigger2 DNA MER2_type 0 2718 1 271 186 68 0 chr2 203928269 203928328 -49328255 + MLT1L LTR MaLR 425 487 -128 1713 168 19 13 chr2 203928438 203928748 -49327835 + AluJb SINE Alu 1 312 0 26 64 0 0 chr2 203929817 203929864 -49326719 + AT_rich Low_complexity Low_complexity 1 47 0 304 241 24 24 chr2 203931113 203931196 -49325387 + MIR SINE MIR 69 151 -111 2110 102 3 0 chr2 203931288 203931572 -49325011 + AluSx SINE Alu 22 306 -6 838 227 35 5 chr2 203931817 203932015 -49324568 + MER3 DNA MER1_type 5 208 -1 332 197 91 0 chr2 203932572 203932638 -49323945 - MLT1D LTR MaLR -428 77 6 1245 330 28 8 chr2 203932677 203933286 -49323297 - HERV16 LTR ERVL -3002 2035 1415 398 249 67 63 chr2 203933347 203933537 -49323046 - L1MEc LINE L1 -4810 1586 1393 222 118 0 0 chr2 203933537 203933571 -49323012 + (TG)n Simple_repeat Simple_repeat 1 34 0 398 249 67 63 chr2 203933571 203933665 -49322918 - L1MEc LINE L1 -5003 1393 1301 183 42 0 0 chr2 203933721 203933745 -49322838 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1791 161 4 0 chr2 203933746 203934025 -49322558 - AluJo SINE Alu -32 280 1 2232 297 91 36 chr2 203934101 203935177 -49321406 - HERV16 LTR ERVL -3771 1225 91 389 304 158 0 chr2 203935309 203935467 -49321116 - MIR SINE MIR -13 249 67 5555 75 94 0 chr2 203936408 203937163 -49319420 + LTR12 LTR ERV1 1 826 0 1070 297 70 44 chr2 203938753 203939406 -49317177 + L2 LINE L2 2622 3313 0 239 359 28 0 chr2 203939853 203939959 -49316624 - MIR3 SINE MIR -1 207 99 1651 173 112 8 chr2 203940054 203940412 -49316171 - MSTD LTR MaLR -1 395 1 2424 60 13 0 chr2 203940481 203940781 -49315802 + AluY SINE Alu 1 304 -7 331 97 97 0 chr2 203940938 203941000 -49315583 - MSTD LTR MaLR -2 394 327 246 260 39 39 chr2 203941204 203941281 -49315302 + MLT1K LTR MaLR 155 231 -357 262 215 46 0 chr2 203941347 203941412 -49315171 + MLT1K LTR MaLR 353 420 -168 2071 243 90 34 chr2 203942669 203943263 -49313320 + L1MD2 LINE L1 4497 5143 -1003 189 0 0 0 chr2 203943263 203943284 -49313299 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 2071 243 90 34 chr2 203943284 203943447 -49313136 + L1MD2 LINE L1 5143 5296 -850 1154 219 115 35 chr2 203943555 203943843 -49312740 + L1M4b LINE L1 193 503 -6356 * 3800 181 60 45 chr2 203943810 203944663 -49311920 + L1MD2 LINE L1 6296 7161 -9 251 278 119 32 chr2 203944968 203945094 -49311489 + MIR SINE MIR 55 191 -71 281 314 25 25 chr2 203945157 203945275 -49311308 - MIR3 SINE MIR -33 175 58 254 369 128 0 chr2 203946389 203946530 -49310053 + L3 LINE CR1 1417 1575 -2 2005 125 3 10 chr2 203946669 203946964 -49309619 + AluSx SINE Alu 1 293 -19 2305 83 13 0 chr2 203946967 203947269 -49309314 + AluSc SINE Alu 1 306 -3 1167 139 0 0 chr2 203947388 203947561 -49309022 + AluSg/x SINE Alu 140 312 0 2371 92 3 0 chr2 203947990 203948294 -49308289 + AluSx SINE Alu 1 305 -7 2120 113 0 3 chr2 203949093 203949402 -49307181 - AluSx SINE Alu 0 308 1 338 246 180 59 chr2 203949431 203949736 -49306847 + L3b LINE CR1 1120 1461 -122 237 277 96 24 chr2 203949886 203949969 -49306614 - L2 LINE L2 0 3313 3225 231 344 194 6 chr2 203951020 203951200 -49305383 - MIR SINE MIR -38 224 11 2014 141 0 3 chr2 203951262 203951566 -49305017 + AluJb SINE Alu 1 303 -9 2323 85 0 10 chr2 203951869 203952176 -49304407 + AluSg1 SINE Alu 1 304 -5 351 0 0 0 chr2 203953080 203953119 -49303464 + (CA)n Simple_repeat Simple_repeat 1 39 0 2321 101 0 3 chr2 203953282 203953590 -49302993 + AluSp SINE Alu 1 307 -6 243 250 0 0 chr2 203953602 203953674 -49302909 + A-rich Low_complexity Low_complexity 1 72 0 2219 92 0 38 chr2 203953771 203954088 -49302495 + AluSq SINE Alu 1 305 -8 2209 102 0 13 chr2 203954109 203954412 -49302171 + AluSx SINE Alu 1 299 -13 2467 122 76 52 chr2 203954530 203954622 -49301961 - MER4D LTR ERV1 -432 471 383 2165 116 24 24 chr2 203954622 203954959 -49301624 + MER1B DNA MER1_type 1 337 0 2467 122 76 52 chr2 203954959 203955161 -49301422 - MER4D LTR ERV1 -520 383 160 2223 100 3 7 chr2 203955161 203955461 -49301122 - AluSx SINE Alu -13 299 1 2467 122 76 52 chr2 203955461 203955625 -49300958 - MER4D LTR ERV1 -743 160 1 2340 90 3 3 chr2 203955794 203956104 -49300479 - AluSp SINE Alu -2 311 2 236 304 200 0 chr2 203957439 203957554 -49299029 - MIR3 SINE MIR -27 181 44 299 272 56 48 chr2 203957770 203957895 -49298688 + MIR SINE MIR 4 129 -133 2099 70 4 0 chr2 203958958 203959229 -49297354 - L1P LINE L1 -5792 354 83 276 145 171 0 chr2 203960027 203960103 -49296480 - Charlie4 DNA MER1_type -69 1892 1804 389 288 72 7 chr2 203960190 203960343 -49296240 - Charlie4 DNA MER1_type -1798 163 1 213 265 41 0 chr2 203960359 203960408 -49296175 - L2 LINE L2 -238 3075 3025 187 320 153 27 chr2 203960737 203960887 -49295696 + MIR SINE MIR 28 196 -66 843 144 0 8 chr2 203962546 203962671 -49293912 - FLAM_C SINE Alu -19 124 1 1697 151 20 23 chr2 203963406 203963705 -49292878 - AluJb SINE Alu -14 298 1 312 235 226 0 chr2 203963889 203963991 -49292592 + MER58A DNA MER1_type 4 128 0 263 181 83 14 chr2 203964537 203964609 -49291974 + AluJ/FRAM SINE Alu 223 299 -3 1008 265 98 49 chr2 203964636 203964805 -49291778 - L1ME3 LINE L1 -231 5931 5772 1953 148 10 0 chr2 203964805 203965103 -49291480 - AluSx SINE Alu -11 301 1 1008 265 98 49 chr2 203965103 203965691 -49290892 - L1ME3 LINE L1 -390 5772 5128 1327 137 129 7 chr2 203965726 203966015 -49290568 + MER33 DNA MER1_type 1 311 -13 864 202 57 31 chr2 203966032 203966225 -49290358 + MER3 DNA MER1_type 7 204 -5 304 213 52 81 chr2 203966257 203966393 -49290190 - L1ME3 LINE L1 -1127 5019 4888 350 283 194 17 chr2 203966395 203966575 -49290008 - L1ME3 LINE L1 -1318 4828 4617 444 260 116 72 chr2 203966616 203966951 -49289632 - L1ME3 LINE L1 -1613 4533 4184 2340 81 3 0 chr2 203968303 203968599 -49287984 + AluY SINE Alu 3 299 -12 702 162 0 0 chr2 203969521 203969626 -49286957 - FLAM_C SINE Alu -16 127 23 214 186 0 0 chr2 203969893 203969936 -49286647 + A-rich Low_complexity Low_complexity 1 43 0 216 303 0 0 chr2 203970143 203970232 -49286351 + T-rich Low_complexity Low_complexity 1 89 0 260 333 151 41 chr2 203971518 203971909 -49284674 + L2 LINE L2 2292 2725 -589 348 229 386 7 chr2 203971967 203972107 -49284476 - MIR SINE MIR -13 249 57 230 248 128 51 chr2 203972123 203972240 -49284343 - MIR SINE MIR -26 236 111 1306 78 12 6 chr2 203973437 203973624 -49282959 + AluSc SINE Alu 111 298 0 547 295 66 37 chr2 203973624 203973868 -49282715 - MIR SINE MIR -7 255 5 5795 166 45 38 chr2 203975819 203976394 -49280189 - L1M4c LINE L1 -5171 1213 644 2058 151 3 0 chr2 203976394 203976698 -49279885 - AluJb SINE Alu -7 305 1 5795 166 45 38 chr2 203976698 203977311 -49279272 - L1M4c LINE L1 -5740 644 16 261 98 0 0 chr2 203977310 203977351 -49279232 - L1MB3 LINE L1 -43 6140 6100 * 1783 158 3 0 chr2 203977351 203977643 -49278940 - HSMAR2 DNA Mariner -612 690 398 341 24 0 0 chr2 203977636 203977678 -49278905 - HSMAR2 DNA Mariner -1256 46 5 * 477 236 186 0 chr2 203977693 203977833 -49278750 - MER103 DNA DNA 0 166 1 1719 160 4 4 chr2 203978382 203978657 -49277926 - AluJb SINE Alu -23 289 15 1675 181 7 0 chr2 203979532 203979813 -49276770 - AluJb SINE Alu -29 283 1 32 26 0 0 chr2 203981513 203981552 -49275031 + AT_rich Low_complexity Low_complexity 1 39 0 719 78 0 0 chr2 203982839 203982941 -49273642 + L1PA13 LINE L1 6062 6163 0 26 30 0 0 chr2 203983294 203983327 -49273256 + AT_rich Low_complexity Low_complexity 1 33 0 25 0 0 0 chr2 203983567 203983592 -49272991 + AT_rich Low_complexity Low_complexity 1 25 0 1671 152 0 59 chr2 203983753 203983911 -49272672 - AluJb SINE Alu -23 289 123 477 0 0 0 chr2 203983911 203983964 -49272619 + (TATG)n Simple_repeat Simple_repeat 2 54 0 1833 180 0 0 chr2 203983964 203984247 -49272336 - AluSx SINE Alu -27 285 3 1671 152 0 59 chr2 203984247 203984390 -49272193 - AluJb SINE Alu -187 125 5 276 285 185 15 chr2 203985410 203985610 -49270973 + L3 LINE CR1 1106 1339 -238 195 290 22 107 chr2 203985569 203985793 -49270790 - L2 LINE L2 -622 2692 2488 * 620 216 24 0 chr2 203985858 203985983 -49270600 - MER46A DNA MER2_type -83 153 26 646 289 78 9 chr2 203986876 203987140 -49269443 - MLT1H LTR MaLR -246 303 20 273 324 162 6 chr2 203987562 203987735 -49268848 - MIR SINE MIR -27 235 36 22 0 0 0 chr2 203988023 203988045 -49268538 + AT_rich Low_complexity Low_complexity 1 22 0 2406 53 0 17 chr2 203988648 203988947 -49267636 - AluY SINE Alu -17 294 1 2373 80 0 0 chr2 203989479 203989767 -49266816 - AluY SINE Alu -22 289 2 2381 108 0 0 chr2 203989962 203990269 -49266314 + AluSg SINE Alu 1 307 -3 736 150 23 23 chr2 203992302 203992435 -49264148 - FLAM_C SINE Alu 0 133 1 258 246 108 20 chr2 203993072 203993236 -49263347 - HsTC2 DNA Tc2 0 1898 5 301 118 20 0 chr2 203993890 203993941 -49262642 + MER75 DNA T2_type 463 514 0 355 312 65 21 chr2 203993978 203994329 -49262254 - L1ME3A LINE L1 -269 5901 5469 2230 112 0 19 chr2 203994329 203994503 -49262080 - AluSx SINE Alu -6 306 139 2411 79 3 0 chr2 203994503 203994807 -49261776 - AluSp SINE Alu -8 305 1 2230 112 0 19 chr2 203994807 203994944 -49261639 - AluSx SINE Alu -173 139 1 355 312 65 21 chr2 203994944 203995073 -49261510 - L1ME3A LINE L1 -701 5469 5347 1975 147 7 0 chr2 203995664 203995957 -49260626 - AluJb SINE Alu -17 295 1 562 266 81 22 chr2 203998166 203998388 -49258195 - L1M3a LINE L1 -5707 248 14 727 136 19 62 chr2 203998486 203998648 -49257935 + L1PA16 LINE L1 6012 6166 0 2175 224 142 33 chr2 203999215 204000183 -49256400 + L1ME1 LINE L1 4298 5370 -776 1391 241 92 13 chr2 204000213 204000804 -49255779 + L1ME1 LINE L1 5495 6156 -10 627 282 96 21 chr2 204002433 204002724 -49253859 - L1ME1 LINE L1 -26 6140 5828 1911 147 3 33 chr2 204003692 204003999 -49252584 - AluJo SINE Alu -14 298 1 1789 253 150 134 chr2 204004104 204004513 -49252070 + L2 LINE L2 1329 1730 -1584 1686 171 13 42 chr2 204004513 204004822 -49251761 - AluJo SINE Alu -12 300 1 1789 253 150 134 chr2 204004822 204005041 -49251542 + L2 LINE L2 1730 1944 -1370 938 160 14 0 chr2 204005041 204005210 -49251373 - AluSg/x SINE Alu 0 306 136 1789 253 150 134 chr2 204005210 204005871 -49250712 + L2 LINE L2 1944 2786 -528 189 0 0 0 chr2 204006147 204006168 -49250415 + (A)n Simple_repeat Simple_repeat 1 21 0 2110 96 29 4 chr2 204006169 204006449 -49250134 - AluSg SINE Alu -23 287 1 22 56 0 0 chr2 204007371 204007407 -49249176 + AT_rich Low_complexity Low_complexity 1 36 0 256 196 0 0 chr2 204007757 204007813 -49248770 + T-rich Low_complexity Low_complexity 1 56 0 196 26 0 77 chr2 204009355 204009394 -49247189 + (CAAT)n Simple_repeat Simple_repeat 3 38 0 2438 204 74 15 chr2 204011666 204011976 -49244607 - MER82 DNA MER2_type -8 645 355 2301 78 0 3 chr2 204011976 204012280 -49244303 - AluSp SINE Alu 0 303 1 2438 204 74 15 chr2 204012280 204012575 -49244008 - MER82 DNA MER2_type -298 355 3 273 57 0 0 chr2 204012575 204012610 -49243973 + (TG)n Simple_repeat Simple_repeat 2 36 0 288 170 0 0 chr2 204012610 204012663 -49243920 + (TA)n Simple_repeat Simple_repeat 1 53 0 32 26 0 0 chr2 204012679 204012718 -49243865 + AT_rich Low_complexity Low_complexity 1 39 0 256 222 64 140 chr2 204013554 204013718 -49242865 + MIR SINE MIR 43 200 -62 816 148 48 63 chr2 204013762 204013951 -49242632 + MER3 DNA MER1_type 1 186 -23 1757 179 47 33 chr2 204014839 204015389 -49241194 + MLT2A2 LTR ERVL 1 554 0 41608 36 8 2 chr2 204015867 204021974 -49234609 + L1PA3 LINE L1 12 6152 -3 32 26 0 0 chr2 204021974 204022013 -49234570 + AT_rich Low_complexity Low_complexity 1 39 0 721 218 27 3 chr2 204022571 204022743 -49233840 + MIR SINE MIR 19 190 -72 21 0 0 0 chr2 204023082 204023103 -49233480 + AT_rich Low_complexity Low_complexity 1 21 0 1642 302 200 29 chr2 204023397 204023970 -49232613 - L2 LINE L2 -24 3289 2815 1740 181 3 3 chr2 204023970 204024269 -49232314 + AluJb SINE Alu 1 299 -13 1642 302 200 29 chr2 204024269 204025399 -49231184 - L2 LINE L2 -498 2815 1183 223 269 77 48 chr2 204025413 204025517 -49231066 + L2 LINE L2 3160 3266 -47 317 198 60 35 chr2 204026002 204026118 -49230465 - L1MC4 LINE L1 -5 8037 7919 1262 172 0 10 chr2 204026584 204026788 -49229795 - AluJo SINE Alu -105 207 6 523 274 49 39 chr2 204028272 204028476 -49228107 + L2 LINE L2 1816 2021 -1293 938 160 14 0 chr2 204028501 204028645 -49227938 - AluSg/x SINE Alu -29 281 136 1443 281 201 27 chr2 204028646 204029687 -49226896 + L2 LINE L2 2004 3243 -70 1671 170 3 69 chr2 204030230 204030428 -49226155 - AluJo SINE Alu -12 300 129 2013 139 7 0 chr2 204030428 204030722 -49225861 + AluJb SINE Alu 1 296 -16 1671 170 3 69 chr2 204030722 204030841 -49225742 - AluJo SINE Alu -183 129 4 1658 299 111 9 chr2 204031235 204032028 -49224555 + HAL1 LINE L1 11 884 -1623 6859 146 19 5 chr2 204032190 204033356 -49223227 + L1MA3 LINE L1 14 1195 -6370 1473 135 19 5 chr2 204033357 204033572 -49223011 + AluJb SINE Alu 73 290 -22 729 160 0 8 chr2 204033572 204033691 -49222892 - AluJo/FLAM SINE Alu -191 121 4 14875 143 25 29 chr2 204033769 204039886 -49216697 + L1MA3 LINE L1 1248 7345 -379 2109 109 20 0 chr2 204039886 204040180 -49216403 - AluSx SINE Alu -6 306 7 14875 143 25 29 chr2 204040180 204040559 -49216024 + L1MA3 LINE L1 7345 7724 0 462 274 158 4 chr2 204040569 204040803 -49215780 - L1M4 LINE L1 -2768 3378 3109 929 260 26 13 chr2 204040813 204041198 -49215385 - L1M4 LINE L1 -3164 2982 2593 24 0 0 0 chr2 204041337 204041361 -49215222 + AT_rich Low_complexity Low_complexity 1 24 0 1131 259 22 16 chr2 204041493 204041863 -49214720 + L1MC4 LINE L1 7526 7897 -145 224 143 48 0 chr2 204041867 204041951 -49214632 + (TA)n Simple_repeat Simple_repeat 1 88 0 263 316 195 8 chr2 204042074 204042428 -49214155 - L1MC/D LINE L1 -1925 5883 5464 667 187 24 0 chr2 204042958 204043081 -49213502 - FLAM_C SINE Alu -7 126 1 1660 164 114 74 chr2 204043081 204043502 -49213081 + LTR47A LTR ERVL 13 450 -2 1274 294 101 44 chr2 204043553 204044441 -49212142 + L2 LINE L2 2205 3041 -272 1209 176 118 15 chr2 204044441 204044713 -49211870 - AluJo SINE Alu -12 300 1 1274 294 101 44 chr2 204044713 204044756 -49211827 + L2 LINE L2 3041 3080 -233 1345 211 61 3 chr2 204044756 204044874 -49211709 + AluJo SINE Alu 1 111 -201 263 27 0 27 chr2 204044874 204044911 -49211672 + (TAAAA)n Simple_repeat Simple_repeat 2 37 0 1345 211 61 3 chr2 204044911 204045086 -49211497 + AluJo SINE Alu 111 311 -1 1274 294 101 44 chr2 204045086 204045138 -49211445 + L2 LINE L2 3080 3253 -60 452 253 86 40 chr2 204045156 204045330 -49211253 + L2 LINE L2 3132 3313 0 30 45 0 0 chr2 204046436 204046480 -49210103 + AT_rich Low_complexity Low_complexity 1 44 0 2236 107 0 0 chr2 204046499 204046798 -49209785 - AluSx SINE Alu -13 299 1 22 0 0 0 chr2 204047181 204047203 -49209380 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 204047313 204047334 -49209249 + AT_rich Low_complexity Low_complexity 1 21 0 856 208 39 81 chr2 204048258 204048518 -49208065 + MIR SINE MIR 3 251 -11 2317 103 10 0 chr2 204049879 204050189 -49206394 + AluSp SINE Alu 1 313 0 22 0 0 0 chr2 204050482 204050504 -49206079 + AT_rich Low_complexity Low_complexity 1 22 0 362 271 47 9 chr2 204050997 204051104 -49205479 + MIR SINE MIR 49 159 -103 188 208 0 57 chr2 204051937 204051990 -49204593 - L2 LINE L2 0 3313 3264 1618 152 76 10 chr2 204052071 204052360 -49204223 + AluJb SINE Alu 1 308 -4 386 303 8 8 chr2 204052373 204052492 -49204091 - L1MC4 LINE L1 -1339 6703 6585 2299 87 0 3 chr2 204052560 204052858 -49203725 - AluY SINE Alu -14 297 1 357 249 140 42 chr2 204053164 204053323 -49203260 - L1MC4 LINE L1 -2331 5477 5294 1880 158 14 0 chr2 204053323 204053620 -49202963 - AluJb SINE Alu -11 301 1 357 249 140 42 chr2 204053620 204053653 -49202930 - L1MC4 LINE L1 -2514 5294 5266 27 49 0 0 chr2 204053892 204053933 -49202650 + AT_rich Low_complexity Low_complexity 1 41 0 329 271 126 20 chr2 204053938 204054137 -49202446 - L1M4 LINE L1 -743 5403 5184 2238 94 0 7 chr2 204054182 204054470 -49202113 + AluSx SINE Alu 1 286 -26 27 62 0 0 chr2 204054470 204054518 -49202065 + AT_rich Low_complexity Low_complexity 1 48 0 399 21 0 0 chr2 204055692 204055740 -49200843 + (CA)n Simple_repeat Simple_repeat 2 49 0 25 51 0 0 chr2 204056209 204056248 -49200335 + AT_rich Low_complexity Low_complexity 1 39 0 272 306 193 23 chr2 204056398 204056751 -49199832 + L2 LINE L2 1910 2322 -992 1491 222 71 24 chr2 204057025 204057435 -49199148 - MLT1C LTR MaLR -35 432 4 5872 163 28 16 chr2 204057637 204058627 -49197956 - L1MC1 LINE L1 0 6333 5326 2530 50 0 3 chr2 204058627 204058925 -49197658 - AluY SINE Alu -14 297 1 5872 163 28 16 chr2 204058925 204059045 -49197538 - L1MC1 LINE L1 -1007 5326 5209 30 0 0 0 chr2 204059060 204059090 -49197493 + AT_rich Low_complexity Low_complexity 1 30 0 1148 206 43 78 chr2 204059114 204059459 -49197124 - L1MC1 LINE L1 -2002 4144 3812 21 0 0 0 chr2 204059480 204059501 -49197082 + AT_rich Low_complexity Low_complexity 1 21 0 966 234 66 24 chr2 204059518 204059997 -49196586 + MER114 LTR ERV 96 646 -2 2901 237 31 81 chr2 204062318 204063520 -49193063 + L1MC4 LINE L1 6401 7542 -500 5761 158 9 26 chr2 204063524 204064900 -49191683 + L1PA16 LINE L1 4125 5523 -643 1581 67 0 0 chr2 204064900 204065094 -49191489 + AluY SINE Alu 1 194 -117 5761 158 9 26 chr2 204065094 204065599 -49190984 + L1PA16 LINE L1 5523 5967 -199 2006 145 3 3 chr2 204065599 204065903 -49190680 + AluJb SINE Alu 1 304 -8 5761 158 9 26 chr2 204065903 204066100 -49190483 + L1PA16 LINE L1 5967 6166 0 387 0 0 0 chr2 204066109 204066152 -49190431 + (CA)n Simple_repeat Simple_repeat 2 44 0 509 269 47 123 chr2 204066176 204066643 -49189940 + L1MC4 LINE L1 7555 7979 -63 1761 159 3 36 chr2 204066643 204066951 -49189632 - AluJo SINE Alu -14 298 1 509 269 47 123 chr2 204066951 204067011 -49189572 + L1MC4 LINE L1 7979 8042 0 22 0 0 0 chr2 204067863 204067885 -49188698 + AT_rich Low_complexity Low_complexity 1 22 0 2134 104 0 3 chr2 204068813 204069100 -49187483 + AluSx SINE Alu 1 286 -26 268 394 49 37 chr2 204069178 204069424 -49187159 - L2 LINE L2 -341 2973 2725 * 456 207 33 50 chr2 204069422 204069543 -49187040 - L2 LINE L2 -15 3298 3180 643 249 81 39 chr2 204071328 204071613 -49184970 + L2 LINE L2 2561 2857 -457 395 315 111 19 chr2 204071897 204072059 -49184524 + MIR SINE MIR 79 255 -7 2483 62 0 10 chr2 204072252 204072560 -49184023 - AluY SINE Alu -6 305 1 22 35 0 0 chr2 204073360 204073389 -49183194 + AT_rich Low_complexity Low_complexity 1 29 0 774 160 3 24 chr2 204073831 204073990 -49182593 - MSTB2 LTR MaLR -286 146 1 892 199 93 53 chr2 204074718 204074944 -49181639 + MSTB2 LTR MaLR 222 456 -1 2069 115 39 0 chr2 204075943 204076222 -49180361 + AluSq SINE Alu 1 290 -23 983 166 22 11 chr2 204076230 204076411 -49180172 + AluSg/x SINE Alu 130 312 0 1273 210 11 4 chr2 204076427 204076708 -49179875 - L1PB4 LINE L1 -7 6149 5867 513 279 86 55 chr2 204078184 204078510 -49178073 - MLT1I LTR MaLR 0 409 74 904 190 208 0 chr2 204079285 204079511 -49177072 + ORSL DNA AcHobo 3 275 0 21 0 0 0 chr2 204079957 204079978 -49176605 + AT_rich Low_complexity Low_complexity 1 21 0 22 80 0 0 chr2 204080204 204080254 -49176329 + AT_rich Low_complexity Low_complexity 1 50 0 22 0 0 0 chr2 204080688 204080710 -49175873 + AT_rich Low_complexity Low_complexity 1 22 0 2292 115 0 3 chr2 204080867 204081172 -49175411 - AluSx SINE Alu -8 304 1 24 0 0 0 chr2 204081500 204081524 -49175059 + AT_rich Low_complexity Low_complexity 1 24 0 27 49 0 0 chr2 204083214 204083255 -49173328 + AT_rich Low_complexity Low_complexity 1 41 0 1163 134 0 21 chr2 204084111 204084297 -49172286 - AluJb SINE Alu -1 311 130 524 184 128 61 chr2 204085015 204085068 -49171515 + L1ME4a LINE L1 5695 5743 -378 1748 175 20 0 chr2 204085068 204085365 -49171218 - AluJo SINE Alu -9 303 1 524 184 128 61 chr2 204085365 204085507 -49171076 + L1ME4a LINE L1 5743 5903 -218 678 169 44 37 chr2 204085518 204085654 -49170929 + LTR8 LTR ERV1 3 139 -552 * 2126 154 57 55 chr2 204085651 204086106 -49170477 + LTR8A LTR ERV1 272 727 0 945 240 18 4 chr2 204086701 204086930 -49169653 + L1ME3A LINE L1 5554 5785 -385 2005 204 31 7 chr2 204086935 204087562 -49169021 + MER67C LTR ERV1 5 710 0 1441 214 39 15 chr2 204087596 204087933 -49168650 + L1ME3A LINE L1 5826 6170 0 216 403 8 24 chr2 204088403 204088455 -49168128 - L2 LINE L2 -19 3253 3202 1812 171 0 7 chr2 204088455 204088754 -49167829 - AluJb SINE Alu -13 299 3 216 403 8 24 chr2 204088754 204088825 -49167758 - L2 LINE L2 -70 3202 3132 2069 74 37 0 chr2 204089435 204089730 -49166853 + AluY SINE Alu 1 305 0 197 316 59 73 chr2 204092166 204092438 -49164145 + L2 LINE L2 1616 1883 -1431 21 0 0 0 chr2 204092638 204092659 -49163924 + AT_rich Low_complexity Low_complexity 1 21 0 231 319 108 47 chr2 204092688 204092901 -49163682 + L2 LINE L2 2825 3050 -222 363 326 36 69 chr2 204093251 204093527 -49163056 - L2 LINE L2 -56 3216 2950 819 241 6 0 chr2 204093527 204093697 -49162886 - MER5B DNA MER1_type -7 171 1 2306 62 0 0 chr2 204093899 204094190 -49162393 + L1PA8 LINE L1 5882 6172 0 469 300 135 0 chr2 204094652 204094822 -49161761 - MER91A DNA MER1_type 0 196 4 2189 146 118 2 chr2 204095087 204095492 -49161091 - LTR47A LTR ERVL 0 452 1 756 263 38 0 chr2 204096616 204096802 -49159781 - MIR SINE MIR -2 260 68 21 57 0 0 chr2 204096878 204096913 -49159670 + AT_rich Low_complexity Low_complexity 1 35 0 22 56 0 0 chr2 204098188 204098224 -49158359 + AT_rich Low_complexity Low_complexity 1 36 0 1624 160 72 7 chr2 204098709 204099002 -49157581 + AluJb SINE Alu 1 312 0 567 293 99 19 chr2 204099074 204099388 -49157195 - L1ME4a LINE L1 -195 5926 5588 727 260 92 16 chr2 204099710 204099960 -49156623 - L1ME LINE L1 -298 5823 5555 388 240 27 68 chr2 204100100 204100246 -49156337 - MIR SINE MIR -122 140 1 1034 279 82 62 chr2 204100408 204100909 -49155674 - MLT1J LTR MaLR 0 511 1 1686 169 0 20 chr2 204101001 204101296 -49155287 - AluJb SINE Alu -23 289 1 1585 191 17 0 chr2 204101298 204101591 -49154992 - AluJo SINE Alu -14 298 1 549 227 152 47 chr2 204101668 204101990 -49154593 - L1MC5 LINE L1 -67 7894 7539 2183 84 3 3 chr2 204102017 204102303 -49154280 + AluY SINE Alu 1 286 -25 33 0 0 0 chr2 204102307 204102340 -49154243 + AT_rich Low_complexity Low_complexity 1 33 0 28 0 0 0 chr2 204103650 204103678 -49152905 + AT_rich Low_complexity Low_complexity 1 28 0 553 297 38 38 chr2 204104481 204104666 -49151917 + L2 LINE L2 3088 3272 0 185 313 30 15 chr2 204105437 204105504 -49151079 + MIR SINE MIR 16 83 -125 248 252 16 118 chr2 204105605 204105682 -49150901 + MIR3 SINE MIR 89 150 -58 783 239 49 16 chr2 204105682 204105929 -49150654 + MER112 DNA MER1_type 1 255 -1 248 252 16 118 chr2 204105929 204105978 -49150605 + MIR3 SINE MIR 150 202 -6 2042 164 3 0 chr2 204106144 204106455 -49150128 - AluJb SINE Alu 0 312 1 188 277 264 27 chr2 204106615 204106763 -49149820 - MIR SINE MIR -38 224 42 1464 107 5 0 chr2 204107464 204107669 -49148914 - AluSg/x SINE Alu -7 305 100 1118 152 0 0 chr2 204107676 204107841 -49148742 + AluJo SINE Alu 39 203 -109 379 346 6 43 chr2 204108372 204108534 -49148049 + MIR3 SINE MIR 2 157 -51 198 118 0 0 chr2 204109095 204109129 -49147454 + (A)n Simple_repeat Simple_repeat 1 34 0 2274 107 0 0 chr2 204109277 204109586 -49146997 + AluSc SINE Alu 1 309 0 1559 167 44 70 chr2 204109654 204109954 -49146629 - MLT1B LTR MaLR -16 374 85 1620 168 73 0 chr2 204109954 204110228 -49146355 + AluJo SINE Alu 7 300 -12 1559 167 44 70 chr2 204110228 204110311 -49146272 - MLT1B LTR MaLR -305 85 1 25 0 0 0 chr2 204110415 204110440 -49146143 + AT_rich Low_complexity Low_complexity 1 25 0 184 361 39 23 chr2 204110562 204110692 -49145891 + L2 LINE L2 2918 3049 -223 332 346 28 55 chr2 204111019 204111236 -49145347 + L1MDa LINE L1 1 618 -5912 1121 286 100 24 chr2 204111803 204112353 -49144230 + L1MDa LINE L1 868 1459 -5071 * 6524 265 57 8 chr2 204112344 204114924 -49141659 + L1MDa LINE L1 2571 5327 -1213 308 64 21 0 chr2 204114926 204114973 -49141610 + (TC)n Simple_repeat Simple_repeat 1 48 0 194 319 58 0 chr2 204116075 204116144 -49140439 + MIR SINE MIR 189 261 -1 26 0 0 0 chr2 204117135 204117161 -49139422 + AT_rich Low_complexity Low_complexity 1 26 0 2362 81 0 0 chr2 204117528 204117825 -49138758 + AluY SINE Alu 1 297 -14 24 0 0 0 chr2 204118474 204118498 -49138085 + AT_rich Low_complexity Low_complexity 1 24 0 4206 158 12 1 chr2 204119169 204120267 -49136316 + L1PA15 LINE L1 4582 5692 -473 3100 93 35 2 chr2 204120267 204120663 -49135920 + MLT2A2 LTR ERVL 1 414 -39 297 0 0 0 chr2 204120663 204120696 -49135887 + (TG)n Simple_repeat Simple_repeat 2 34 0 3100 93 35 2 chr2 204120696 204120728 -49135855 + MLT2A2 LTR ERVL 414 443 -10 215 30 0 30 chr2 204120773 204120806 -49135777 + (TA)n Simple_repeat Simple_repeat 2 33 0 214 85 21 21 chr2 204120833 204120880 -49135703 + (TA)n Simple_repeat Simple_repeat 1 47 0 287 119 0 0 chr2 204120885 204120927 -49135656 + MLT2A2 LTR ERVL 402 443 -10 2846 115 86 0 chr2 204120928 204121370 -49135213 + L1PA15 LINE L1 5683 6162 -3 707 177 85 105 chr2 204121965 204122213 -49134370 - L1MC4 LINE L1 -463 7579 7337 1463 244 68 10 chr2 204122242 204122656 -49133927 - MER74C LTR ERVL -13 447 10 431 184 10 58 chr2 204122676 204122779 -49133804 - L1MC4a LINE L1 -548 7260 7163 883 203 42 9 chr2 204122784 204123001 -49133582 - L1MC4 LINE L1 -953 7089 6866 456 209 33 72 chr2 204123011 204123164 -49133419 - MLT1E2 LTR MaLR -479 147 1 1681 158 6 25 chr2 204123299 204123615 -49132968 - AluJo SINE Alu -1 311 2 507 279 139 30 chr2 204124432 204124805 -49131778 - LTR16C LTR ERVL -2 489 76 2332 90 0 0 chr2 204125690 204126001 -49130582 + AluY SINE Alu 1 311 0 225 0 0 0 chr2 204126605 204126630 -49129953 + (CA)n Simple_repeat Simple_repeat 2 26 0 * 309 26 0 0 chr2 204126629 204126667 -49129916 + (GA)n Simple_repeat Simple_repeat 2 39 0 26 0 0 0 chr2 204126739 204126765 -49129818 + AT_rich Low_complexity Low_complexity 1 26 0 24 53 0 0 chr2 204128461 204128499 -49128084 + AT_rich Low_complexity Low_complexity 1 38 0 821 250 51 25 chr2 204128701 204128937 -49127646 + MIR SINE MIR 20 261 -1 281 281 208 0 chr2 204129072 204129168 -49127415 + MIR3 SINE MIR 50 165 -43 639 234 24 49 chr2 204129217 204129422 -49127161 - MER58C DNA MER1_type -15 200 1 1591 196 67 39 chr2 204130428 204130914 -49125669 + Charlie1 DNA MER1_type 1 2761 0 316 190 63 126 chr2 204131702 204131876 -49124707 - MER104 DNA Tc2 -7 173 11 27 29 0 0 chr2 204134744 204134778 -49121805 + AT_rich Low_complexity Low_complexity 1 34 0 189 280 0 0 chr2 204135194 204135244 -49121339 - L2 LINE L2 -5 3308 3259 218 188 0 87 chr2 204135965 204136034 -49120549 - MIR SINE MIR -49 213 151 * 474 339 162 6 chr2 204136016 204136349 -49120234 + L2 LINE L2 2509 2893 -421 2110 99 0 0 chr2 204136488 204136761 -49119822 + AluSq SINE Alu 22 294 -19 333 315 67 34 chr2 204136769 204136947 -49119636 + L2 LINE L2 3125 3308 -5 218 257 81 14 chr2 204136954 204137028 -49119555 - MIR SINE MIR -121 141 63 666 260 177 51 chr2 204137187 204137622 -49118961 + LTR33 LTR ERVL 24 513 -8 195 42 0 0 chr2 204139166 204139190 -49117393 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 880 174 89 27 chr2 204139403 204139757 -49116826 + MLT1B LTR MaLR 1 390 0 271 302 27 60 chr2 204139802 204139951 -49116632 + MIR SINE MIR 73 216 -46 370 315 39 16 chr2 204140316 204140443 -49116140 + MER5A DNA MER1_type 1 130 -59 2235 105 76 15 chr2 204140490 204140832 -49115751 + THE1B LTR MaLR 2 364 0 576 174 12 75 chr2 204140841 204141002 -49115581 - L1ME3 LINE L1 -42 6120 5970 452 161 0 23 chr2 204141005 204141092 -49115491 - Charlie2 DNA MER1_type -59 2803 2719 4062 171 65 20 chr2 204141152 204141803 -49114780 - L1MB7 LINE L1 -19 6165 5454 2399 48 41 3 chr2 204141803 204142097 -49114486 - AluY SINE Alu -6 305 1 4062 171 65 20 chr2 204142097 204142440 -49114143 - L1MB7 LINE L1 -730 5454 5128 2061 117 62 3 chr2 204142715 204143039 -49113544 - MER61A LTR ERV1 0 343 1 542 296 84 62 chr2 204143073 204143587 -49112996 - L2 LINE L2 -37 3276 2701 766 300 156 3 chr2 204143842 204144189 -49112394 - L2 LINE L2 0 3313 2914 2039 159 22 6 chr2 204144249 204144608 -49111975 + MLT1A1 LTR MaLR 1 365 0 763 183 0 0 chr2 204145036 204145167 -49111416 - FRAM SINE Alu -36 140 10 21 0 0 0 chr2 204145524 204145545 -49111038 + AT_rich Low_complexity Low_complexity 1 21 0 26 30 0 0 chr2 204145894 204145927 -49110656 + AT_rich Low_complexity Low_complexity 1 33 0 26 88 0 0 chr2 204145988 204146056 -49110527 + AT_rich Low_complexity Low_complexity 1 68 0 234 277 0 0 chr2 204146321 204146386 -49110197 + A-rich Low_complexity Low_complexity 1 65 0 22 0 0 0 chr2 204148027 204148049 -49108534 + AT_rich Low_complexity Low_complexity 1 22 0 1146 169 4 44 chr2 204148049 204148274 -49108309 + AluJo SINE Alu 86 301 -11 22 0 0 0 chr2 204151233 204151255 -49105328 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 204151653 204151674 -49104909 + AT_rich Low_complexity Low_complexity 1 21 0 196 264 0 0 chr2 204151678 204151731 -49104852 + L2 LINE L2 3261 3313 0 1787 147 25 0 chr2 204151763 204152049 -49104534 + AluJo SINE Alu 5 297 -15 243 253 11 32 chr2 204152050 204152145 -49104438 + HAL1b LINE L1 645 737 -611 316 267 99 53 chr2 204153653 204153751 -49102832 + L1ME4a LINE L1 5624 5716 -405 2288 56 16 47 chr2 204153751 204154072 -49102511 - AluY SINE Alu 0 311 1 316 267 99 53 chr2 204154072 204154235 -49102348 + L1ME4a LINE L1 5716 5897 -224 241 281 0 0 chr2 204154761 204154818 -49101765 + MLT1J2 LTR MaLR 392 448 -2 567 115 23 0 chr2 204155914 204156001 -49100582 - L1MB2 LINE L1 -28 6143 6055 2291 60 0 3 chr2 204156600 204156882 -49099701 + AluY SINE Alu 1 281 -30 250 324 34 40 chr2 204156927 204157075 -49099508 + MIR SINE MIR 67 213 -49 419 319 37 5 chr2 204157164 204157352 -49099231 + L1ME LINE L1 5560 5753 -368 293 304 59 0 chr2 204157595 204157697 -49098886 + MER103 DNA DNA 11 118 -48 328 291 61 20 chr2 204157759 204157907 -49098676 - MIR SINE MIR -108 154 1 207 258 76 0 chr2 204160221 204160287 -49096296 + MIR SINE MIR 185 255 -7 21 36 0 0 chr2 204162183 204162211 -49094372 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr2 204162479 204162510 -49094073 + AT_rich Low_complexity Low_complexity 1 31 0 332 153 0 14 chr2 204162668 204162740 -49093843 + CT-rich Low_complexity Low_complexity 3 73 0 1724 152 23 19 chr2 204162742 204163051 -49093532 - AluJb SINE Alu -2 310 1 274 285 22 0 chr2 204163797 204163880 -49092703 + MIR SINE MIR 40 125 -83 918 235 43 45 chr2 204165277 204165543 -49091040 + L1 LINE L1 4197 4463 -1683 663 248 44 15 chr2 204165543 204165749 -49090834 - MER58C DNA MER1_type -3 212 1 918 235 43 45 chr2 204165749 204165856 -49090727 + L1 LINE L1 4463 4569 -1577 1606 150 20 14 chr2 204165949 204166242 -49090341 - L1MC2 LINE L1 -41 6303 6009 22 0 0 0 chr2 204166249 204166271 -49090312 + AT_rich Low_complexity Low_complexity 1 22 0 1763 131 26 36 chr2 204166378 204166683 -49089900 - AluJb SINE Alu -9 303 2 2111 78 4 0 chr2 204166696 204166967 -49089616 - AluY SINE Alu -39 272 1 23 33 0 0 chr2 204167325 204167355 -49089228 + AT_rich Low_complexity Low_complexity 1 30 0 533 288 137 56 chr2 204167370 204167938 -49088645 + L1MEc LINE L1 2069 2628 -3587 23 33 0 0 chr2 204168175 204168205 -49088378 + AT_rich Low_complexity Low_complexity 1 30 0 26 30 0 0 chr2 204168687 204168720 -49087863 + AT_rich Low_complexity Low_complexity 1 33 0 848 141 20 0 chr2 204168870 204169019 -49087564 - AluJb SINE Alu -6 306 155 2067 259 67 31 chr2 204169052 204169751 -49086832 - L1ME1 LINE L1 -92 6074 5351 514 199 143 10 chr2 204169757 204169953 -49086630 - L1ME1 LINE L1 -940 5206 4985 371 152 0 45 chr2 204169967 204170033 -49086550 + L1M3f LINE L1 3 65 -5263 376 149 104 0 chr2 204170357 204170424 -49086159 + L1 LINE L1 4895 4968 -1178 227 336 124 9 chr2 204170724 204170837 -49085746 - L2 LINE L2 -1 3312 3187 2481 135 19 5 chr2 204173968 204174384 -49082199 + L1MA5 LINE L1 5877 6298 -2 1017 161 19 14 chr2 204174528 204174739 -49081844 + L1MA9 LINE L1 6091 6302 -10 27 0 0 0 chr2 204174800 204174827 -49081756 + AT_rich Low_complexity Low_complexity 1 27 0 307 333 35 7 chr2 204179316 204179460 -49077123 + L1ME LINE L1 5629 5776 -345 242 98 0 24 chr2 204179490 204179531 -49077052 + L1ME LINE L1 5847 5886 -235 21 0 0 0 chr2 204179669 204179690 -49076893 + AT_rich Low_complexity Low_complexity 1 21 0 228 86 0 0 chr2 204179830 204179865 -49076718 + (CA)n Simple_repeat Simple_repeat 1 35 0 830 129 23 23 chr2 204179895 204180027 -49076556 - FLAM_C SINE Alu 0 133 2 224 260 31 73 chr2 204181120 204181216 -49075367 - MIR SINE MIR -114 148 57 385 219 24 32 chr2 204181648 204181771 -49074812 - L1MA4A LINE L1 0 6303 6182 1924 153 51 0 chr2 204181809 204182163 -49074420 - L1PB4 LINE L1 -79 6077 5706 22 0 0 0 chr2 204182232 204182254 -49074329 + AT_rich Low_complexity Low_complexity 1 22 0 1309 140 9 22 chr2 204182470 204182692 -49073891 + L1PA15 LINE L1 5945 6163 -2 240 200 133 0 chr2 204182929 204183004 -49073579 + L1MA4 LINE L1 6204 6288 -12 27 29 0 0 chr2 204183004 204183038 -49073545 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr2 204184737 204184758 -49071825 + AT_rich Low_complexity Low_complexity 1 21 0 408 279 115 58 chr2 204184773 204185361 -49071222 + L1M4c LINE L1 1284 1920 -861 2315 73 0 3 chr2 204187156 204187443 -49069140 - AluSg SINE Alu -19 291 6 2012 141 7 0 chr2 204188090 204188396 -49068187 - AluSx SINE Alu 0 308 1 277 286 159 40 chr2 204188465 204188717 -49067866 - L2 LINE L2 -8 3305 3024 1006 206 125 7 chr2 204189468 204189749 -49066834 + L1MC2 LINE L1 4855 5168 -978 355 140 0 0 chr2 204189761 204189818 -49066765 - Alu SINE Alu -3 299 243 1012 130 10 68 chr2 204189818 204190010 -49066573 + MER50 LTR ERV1 1 181 -553 1675 152 0 0 chr2 204190010 204190252 -49066331 + AluSx SINE Alu 1 242 -70 2463 65 0 10 chr2 204190252 204190558 -49066025 + AluY SINE Alu 1 303 -8 434 156 0 0 chr2 204190558 204190622 -49065961 + AluSx SINE Alu 231 294 -15 3066 143 40 12 chr2 204190623 204191142 -49065441 + MER50 LTR ERV1 178 711 -23 1391 165 4 55 chr2 204191145 204191400 -49065183 - AluJo SINE Alu -68 244 3 4875 164 74 31 chr2 204191400 204192402 -49064181 + L1MC2 LINE L1 5173 6131 -213 2005 109 39 3 chr2 204192402 204192686 -49063897 + AluSc SINE Alu 1 294 -15 4875 164 74 31 chr2 204192686 204192785 -49063798 + L1MC2 LINE L1 6131 6224 -120 2048 150 0 0 chr2 204192785 204193078 -49063505 - AluSx SINE Alu -19 293 1 4875 164 74 31 chr2 204193078 204193098 -49063485 + L1MC2 LINE L1 6224 6342 -2 478 287 87 26 chr2 204193233 204193463 -49063120 - L2 LINE L2 -896 2418 2175 6128 138 19 5 chr2 204193527 204194786 -49061797 + L1PB1 LINE L1 4516 5801 -350 378 0 0 0 chr2 204194786 204194828 -49061755 + (CA)n Simple_repeat Simple_repeat 2 43 0 6128 138 19 5 chr2 204194828 204195185 -49061398 + L1PB1 LINE L1 5801 6151 0 434 240 0 10 chr2 204195897 204195997 -49060586 - MIR SINE MIR -111 151 53 2175 111 3 10 chr2 204196298 204196596 -49059987 - AluSx SINE Alu -15 297 2 2172 89 21 7 chr2 204197749 204198040 -49058543 + AluSx SINE Alu 1 295 -17 21 0 0 0 chr2 204198565 204198586 -49057997 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 204199326 204199349 -49057234 + AT_rich Low_complexity Low_complexity 1 23 0 212 109 0 22 chr2 204200938 204200984 -49055599 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 1927 134 106 0 chr2 204201381 204201710 -49054873 - L1PA16 LINE L1 0 6166 5803 5588 189 6 17 chr2 204202292 204203502 -49053081 + L1P4 LINE L1 4122 5322 -844 2111 125 3 0 chr2 204203502 204203797 -49052786 + AluSc SINE Alu 1 296 -13 5588 189 6 17 chr2 204203797 204204097 -49052486 + L1P4 LINE L1 5322 5624 -542 351 182 40 71 chr2 204204532 204204631 -49051952 + MLT1F LTR MaLR 1 96 -446 * 593 231 43 24 chr2 204204629 204204795 -49051788 + MLT1H1 LTR MaLR 406 555 0 2101 110 7 0 chr2 204204913 204205205 -49051378 + AluSg SINE Alu 1 294 -16 489 290 32 21 chr2 204205232 204205418 -49051165 - MIR SINE MIR -2 260 73 3340 48 0 0 chr2 204206974 204207388 -49049195 - L1P LINE L1 -1049 5097 4684 25 31 0 0 chr2 204207621 204207653 -49048930 + AT_rich Low_complexity Low_complexity 1 32 0 2280 109 0 0 chr2 204208263 204208556 -49048027 + AluSx SINE Alu 2 294 -18 480 118 0 0 chr2 204209865 204209933 -49046650 + Tigger2 DNA MER2_type 2 69 -2649 * 2596 139 51 7 chr2 204209917 204210350 -49046233 + Tigger2 DNA MER2_type 2267 2718 0 551 314 46 0 chr2 204210542 204210717 -49045866 - MIR SINE MIR -37 225 43 671 102 0 0 chr2 204210780 204210868 -49045715 + AluSg/x SINE Alu 193 280 -29 230 0 0 32 chr2 204210868 204210899 -49045684 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 2500 111 42 39 chr2 204211506 204212000 -49044583 - L1MA8 LINE L1 0 6291 5796 22 56 0 0 chr2 204212275 204212311 -49044272 + AT_rich Low_complexity Low_complexity 1 36 0 5639 140 41 24 chr2 204212457 204212603 -49043980 - L1MA3 LINE L1 -26 7698 7556 1957 135 11 0 chr2 204212603 204212884 -49043699 - AluJb SINE Alu -28 284 1 5639 140 41 24 chr2 204212884 204213980 -49042603 - L1MA3 LINE L1 -168 7556 6434 336 280 9 28 chr2 204214084 204214191 -49042392 + ERVL LTR ERVL 4756 4860 -904 336 145 0 36 chr2 204214402 204214485 -49042098 + (TTC)n Simple_repeat Simple_repeat 1 80 0 786 334 90 24 chr2 204214487 204214942 -49041641 + L2 LINE L2 2827 3311 -2 6911 54 6 4 chr2 204215312 204217049 -49039534 - L1PA8 LINE L1 0 6172 4469 5112 49 0 8 chr2 204217420 204218056 -49038527 + L1PA5 LINE L1 5524 6154 0 31104 102 8 31 chr2 204218343 204221201 -49035382 + L1PA7 LINE L1 471 3396 -2758 2404 95 0 13 chr2 204221201 204221516 -49035067 - AluY SINE Alu 0 311 1 31104 102 8 31 chr2 204221516 204222500 -49034083 + L1PA7 LINE L1 3396 4402 -1752 1929 156 0 0 chr2 204222500 204222807 -49033776 + AluSx SINE Alu 1 307 0 31104 102 8 31 chr2 204222807 204224792 -49031791 + L1PA7 LINE L1 4402 6153 -1 973 35 17 0 chr2 204224800 204224915 -49031668 + AluSq/x SINE Alu 12 128 -184 246 149 35 0 chr2 204224915 204225002 -49031581 + (TA)n Simple_repeat Simple_repeat 1 90 0 309 218 0 0 chr2 204225343 204225421 -49031162 + GA-rich Low_complexity Low_complexity 2 79 0 323 300 39 8 chr2 204226274 204226404 -49030179 + L2 LINE L2 2349 2482 -832 656 290 81 23 chr2 204227813 204228268 -49028315 + ERVL LTR ERVL 3628 4157 -1425 364 284 86 0 chr2 204228269 204228385 -49028198 + MER94 DNA DNA 1 126 -8 575 222 124 5 chr2 204228551 204228747 -49027836 + ERVL LTR ERVL 4345 4526 -1128 12406 163 22 24 chr2 204228916 204229616 -49026967 - L1MA3 LINE L1 -1267 6298 5598 2302 72 0 39 chr2 204229616 204229923 -49026660 + AluSg SINE Alu 1 295 -15 12406 163 22 24 chr2 204229923 204232926 -49023657 - L1MA3 LINE L1 -1967 5598 2595 7132 175 91 16 chr2 204232923 204234257 -49022326 - L1MA3 LINE L1 -6115 1450 17 * 215 302 16 0 chr2 204236253 204236316 -49020267 + MIR SINE MIR 82 145 -63 207 314 129 63 chr2 204236365 204236776 -49019807 - L2 LINE L2 -27 3245 2808 407 260 99 97 chr2 204237810 204238222 -49018361 - L2 LINE L2 -16 3256 2844 1878 130 29 29 chr2 204238498 204238805 -49017778 - AluSx SINE Alu -5 307 1 1718 143 50 11 chr2 204238839 204239119 -49017464 + AluSx SINE Alu 1 291 -21 210 213 43 0 chr2 204239121 204239168 -49017415 + GA-rich Low_complexity Low_complexity 1 49 0 32 26 0 0 chr2 204239732 204239771 -49016812 + AT_rich Low_complexity Low_complexity 1 39 0 477 0 0 0 chr2 204239789 204239842 -49016741 + (CA)n Simple_repeat Simple_repeat 2 54 0 21617 156 28 35 chr2 204240080 204245136 -49011447 + L1MA3 LINE L1 17 4990 -2734 2465 122 5 11 chr2 204245136 204245512 -49011071 + THE1C LTR MaLR 2 375 0 21617 156 28 35 chr2 204245512 204248227 -49008356 + L1MA3 LINE L1 4990 7724 0 2288 151 69 2 chr2 204248365 204248770 -49007813 - MSTB1 LTR MaLR 0 432 1 246 286 0 14 chr2 204248959 204249029 -49007554 - MER94 DNA DNA -1 133 65 293 241 69 25 chr2 204249220 204249407 -49007176 + MLT1H LTR MaLR 250 477 -72 1202 93 0 0 chr2 204249426 204249611 -49006972 - AluSc SINE Alu 0 314 130 252 404 60 7 chr2 204249958 204250109 -49006474 - L2 LINE L2 0 3272 3114 291 372 63 35 chr2 204251006 204251436 -49005147 + L2 LINE L2 2841 3282 -31 22 0 0 0 chr2 204252399 204252421 -49004162 + AT_rich Low_complexity Low_complexity 1 22 0 235 226 168 7 chr2 204252602 204252739 -49003844 - L1ME4a LINE L1 -7 6114 5956 318 272 48 10 chr2 204252836 204252939 -49003644 + L2 LINE L2 3192 3298 -15 6191 130 25 10 chr2 204253641 204254672 -49001911 - L1MA6 LINE L1 0 6300 5254 2272 167 61 2 chr2 204254687 204255082 -49001501 + MSTA LTR MaLR 1 418 -10 2720 158 28 12 chr2 204255090 204255475 -49001108 - L1MA6 LINE L1 -901 5245 4868 1762 163 24 10 chr2 204255475 204255763 -49000820 + AluJb SINE Alu 1 292 -20 2720 158 28 12 chr2 204255763 204255870 -49000713 - L1MA6 LINE L1 -1278 4868 4742 405 0 0 0 chr2 204255870 204255915 -49000668 + (TG)n Simple_repeat Simple_repeat 2 46 0 350 272 0 0 chr2 204255953 204256045 -49000538 - L1MC4 LINE L1 -1337 6705 6614 311 281 0 21 chr2 204255973 204256069 -49000514 + L1MC4 LINE L1 6610 6703 -1339 * 184 154 39 0 chr2 204256540 204256592 -48999991 + A-rich Low_complexity Low_complexity 6 59 0 217 203 0 85 chr2 204257651 204257710 -48998873 - L2 LINE L2 -8 3264 3211 2328 100 0 0 chr2 204260031 204260330 -48996253 - AluSc SINE Alu -10 299 1 1573 122 0 0 chr2 204260896 204261134 -48995449 - L1 LINE L1 -1395 4751 4514 2290 99 0 0 chr2 204261531 204261824 -48994759 - AluSx SINE Alu -14 298 6 1931 98 0 18 chr2 204262275 204262550 -48994033 + AluSc SINE Alu 1 270 -39 478 194 10 0 chr2 204262990 204263088 -48993495 + L1PA16 LINE L1 6066 6164 -2 2012 97 41 10 chr2 204263337 204263627 -48992956 + AluY SINE Alu 1 299 -12 752 293 50 87 chr2 204263811 204264810 -48991773 + L1MEd LINE L1 3 964 -5155 1091 152 0 18 chr2 204266417 204266588 -48989995 - FRAM SINE Alu -16 160 1 24 0 0 0 chr2 204266665 204266689 -48989894 + AT_rich Low_complexity Low_complexity 1 24 0 253 286 0 0 chr2 204267692 204267748 -48988835 - L2 LINE L2 0 3313 3258 2290 113 0 0 chr2 204267774 204268075 -48988508 + AluSq SINE Alu 1 301 -12 5961 187 111 74 chr2 204269440 204269713 -48986870 + L1MB7 LINE L1 2734 2995 -3189 1548 174 54 20 chr2 204269713 204269831 -48986752 + AluJb SINE Alu 1 114 -198 207 0 0 0 chr2 204269831 204269854 -48986729 + (CA)n Simple_repeat Simple_repeat 1 23 0 1548 174 54 20 chr2 204269854 204270029 -48986554 + AluJb SINE Alu 114 304 -8 2071 116 0 14 chr2 204270030 204270348 -48986235 + AluY SINE Alu 1 314 0 5961 187 111 74 chr2 204270348 204270955 -48985628 + L1MB7 LINE L1 2995 3578 -2606 189 0 0 0 chr2 204270955 204270976 -48985607 + (CA)n Simple_repeat Simple_repeat 2 22 0 5961 187 111 74 chr2 204270976 204271080 -48985503 + L1MB7 LINE L1 3578 3677 -2507 1666 168 29 0 chr2 204271080 204271354 -48985229 + AluJo SINE Alu 9 290 -22 5961 187 111 74 chr2 204271354 204272574 -48984009 + L1MB7 LINE L1 3677 4850 -1334 2272 135 25 0 chr2 204272574 204272929 -48983654 + THE1B LTR MaLR 1 364 0 5961 187 111 74 chr2 204272929 204273861 -48982722 + L1MB7 LINE L1 4850 6042 -142 2483 156 32 2 chr2 204273861 204274271 -48982312 - MSTB LTR MaLR -1 425 4 5961 187 111 74 chr2 204274271 204274403 -48982180 + L1MB7 LINE L1 6042 6168 -16 1533 194 17 75 chr2 204274627 204275176 -48981407 + L1MA4 LINE L1 5066 5504 -796 2020 153 10 3 chr2 204275176 204275484 -48981099 - AluSx SINE Alu -1 311 2 1533 194 17 75 chr2 204275484 204275755 -48980828 + L1MA4 LINE L1 5504 5789 -511 3081 120 9 25 chr2 204275818 204276343 -48980240 + L1MA4 LINE L1 5773 6289 -11 24 32 0 0 chr2 204278100 204278131 -48978452 + AT_rich Low_complexity Low_complexity 1 31 0 1084 271 130 40 chr2 204279835 204280366 -48976217 - L1MC4a LINE L1 -1871 5937 5359 26 0 0 0 chr2 204282031 204282057 -48974526 + AT_rich Low_complexity Low_complexity 1 26 0 1882 135 3 30 chr2 204282057 204282354 -48974229 - AluSg SINE Alu -21 289 1 359 345 37 51 chr2 204282365 204282661 -48973922 + L1MC/D LINE L1 4537 4828 -1318 269 320 39 0 chr2 204282738 204282866 -48973717 + L1MC/D LINE L1 4883 5015 -1131 21 0 0 0 chr2 204282866 204282887 -48973696 + AT_rich Low_complexity Low_complexity 1 21 0 546 345 71 2 chr2 204283131 204283566 -48973017 + L1MC/D LINE L1 5284 5748 -2060 * 1041 143 11 0 chr2 204283553 204283735 -48972848 + L1M1 LINE L1 2190 2373 -5192 1829 91 4 14 chr2 204283735 204284011 -48972572 + L1MA2 LINE L1 6032 6304 0 28 0 0 0 chr2 204284405 204284433 -48972150 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 204284732 204284760 -48971823 + AT_rich Low_complexity Low_complexity 1 28 0 487 219 0 41 chr2 204284869 204284992 -48971591 + Tigger2a DNA MER2_type 1 118 -316 * 1626 176 63 63 chr2 204284968 204285383 -48971200 + Tigger2 DNA MER2_type 2304 2718 0 2195 129 0 3 chr2 204285649 204285952 -48970631 - AluSx SINE Alu -10 302 1 5159 126 55 45 chr2 204286403 204286578 -48970005 - Tigger1 DNA MER2_type -1 2417 2245 1674 190 7 7 chr2 204286578 204286867 -48969716 + AluJb SINE Alu 1 289 -23 5159 126 55 45 chr2 204286867 204286887 -48969696 - Tigger1 DNA MER2_type -173 2245 2227 2137 127 0 0 chr2 204286887 204287179 -48969404 + AluSx SINE Alu 3 294 -18 5159 126 55 45 chr2 204287179 204287916 -48968667 - Tigger1 DNA MER2_type -191 2227 1475 738 113 23 30 chr2 204287929 204288062 -48968521 - L1PA16 LINE L1 -9 6157 6026 2279 169 22 0 chr2 204288063 204288466 -48968117 + MSTA LTR MaLR 17 428 0 4796 124 61 22 chr2 204288499 204289331 -48967252 - Tigger1 DNA MER2_type -1553 865 1 230 184 0 20 chr2 204289339 204289388 -48967195 + (CATATA)n Simple_repeat Simple_repeat 4 51 0 1561 161 73 36 chr2 204289916 204290246 -48966337 - MER2 DNA MER2_type 0 344 3 269 269 132 96 chr2 204290607 204290826 -48965757 + L2 LINE L2 2985 3211 -61 324 257 106 26 chr2 204290946 204291059 -48965524 - MER5A DNA MER1_type -25 164 43 1014 219 27 27 chr2 204291089 204291313 -48965270 - MER58A DNA MER1_type 0 224 1 214 261 108 0 chr2 204291480 204291545 -48965038 + L2 LINE L2 3241 3312 -1 23 54 0 0 chr2 204292602 204292639 -48963944 + AT_rich Low_complexity Low_complexity 1 37 0 210 37 0 0 chr2 204294288 204294315 -48962268 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 196 175 25 0 chr2 204294486 204294526 -48962057 + MIR3 SINE MIR 168 208 0 489 233 78 39 chr2 204294562 204294742 -48961841 - MIR SINE MIR 0 262 76 1929 159 36 36 chr2 204295088 204295452 -48961131 - THE1B LTR MaLR 0 364 1 12090 82 9 0 chr2 204295452 204297018 -48959565 - THE1A-int LTR MaLR 0 1580 1 1950 157 11 28 chr2 204297019 204297376 -48959207 - THE1A LTR MaLR -1 354 4 1972 232 55 7 chr2 204297536 204298136 -48958447 + L1M4 LINE L1 3354 3982 -2164 3494 166 45 19 chr2 204298221 204298974 -48957609 - L1MA7 LINE L1 -10 6281 5509 3556 147 133 112 chr2 204299232 204299729 -48956854 - L1MC3 LINE L1 -79 7706 7221 385 198 30 10 chr2 204299729 204299830 -48956753 - MLT1F1 LTR MaLR -430 137 35 3556 147 133 112 chr2 204299830 204300314 -48956269 - L1MC3 LINE L1 -564 7221 6602 2348 96 3 6 chr2 204300420 204300755 -48955828 + L1PB1 LINE L1 5813 6146 -5 1495 192 39 36 chr2 204300944 204301252 -48955331 + AluJb SINE Alu 1 309 -3 854 139 7 0 chr2 204301252 204301403 -48955180 + GA-rich Low_complexity Low_complexity 1 152 0 344 254 8 0 chr2 204301447 204301565 -48955018 + GA-rich Low_complexity Low_complexity 4 122 0 508 276 97 31 chr2 204301867 204302162 -48954421 + L1MDa LINE L1 2316 2635 -3907 313 231 96 0 chr2 204302199 204302303 -48954280 + L1MEd LINE L1 3 116 -6003 347 303 44 26 chr2 204303037 204303308 -48953275 - L1ME LINE L1 -316 5805 5530 340 244 173 8 chr2 204304749 204304876 -48951707 + MIR SINE MIR 108 255 -7 777 272 97 93 chr2 204305204 204305815 -48950768 + MLT1L LTR MaLR 1 613 -2 1952 167 140 33 chr2 204305853 204306309 -48950274 - MLT1D LTR MaLR 0 505 1 401 215 89 15 chr2 204306439 204306574 -48950009 + MLT1L LTR MaLR 466 610 -5 256 342 97 42 chr2 204306729 204306966 -48949617 + L2 LINE L2 1426 1675 -1639 2201 121 3 0 chr2 204307035 204307341 -48949242 - AluSx SINE Alu -5 307 1 2118 117 0 10 chr2 204308194 204308545 -48948038 + AluSg SINE Alu 1 310 0 377 337 82 4 chr2 204308822 204309100 -48947483 - L1ME3 LINE L1 -222 5940 5640 312 335 76 20 chr2 204309136 204309333 -48947250 - L1ME3 LINE L1 -1301 4845 4638 769 290 64 43 chr2 204309636 204310029 -48946554 + LTR33 LTR ERVL 29 429 -92 438 227 36 9 chr2 204310086 204310196 -48946387 + LTR33 LTR ERVL 409 521 0 187 164 55 0 chr2 204312181 204312236 -48944347 + GA-rich Low_complexity Low_complexity 3 60 0 282 307 28 82 chr2 204312509 204312721 -48943862 - MIR SINE MIR -67 195 2 515 232 0 1 chr2 204314102 204314242 -48942341 + L1MB3 LINE L1 4623 4761 -1385 1136 192 41 50 chr2 204314253 204314559 -48942024 + L1MB3 LINE L1 4901 5205 -941 2326 86 0 13 chr2 204314559 204314862 -48941721 + AluY SINE Alu 1 299 -12 1136 192 41 50 chr2 204314862 204314894 -48941689 + L1MB3 LINE L1 5205 5236 -910 3557 131 48 38 chr2 204314911 204315106 -48941477 + L1MB3 LINE L1 5482 5674 -509 240 111 0 0 chr2 204315106 204315142 -48941441 + (TA)n Simple_repeat Simple_repeat 2 37 0 3557 131 48 38 chr2 204315142 204315634 -48940949 + L1MB3 LINE L1 5674 6176 -7 1406 339 160 31 chr2 204315699 204317584 -48938999 - L2 LINE L2 -584 2730 604 542 290 196 51 chr2 204319423 204319816 -48936767 - L2 LINE L2 -6 3307 2858 485 290 68 68 chr2 204319843 204320150 -48936433 - L2 LINE L2 -643 2671 2365 1569 151 100 4 chr2 204320165 204320436 -48936147 + AluSx SINE Alu 3 299 -13 238 219 0 37 chr2 204320436 204320518 -48936065 + GA-rich Low_complexity Low_complexity 2 80 0 3390 79 19 2 chr2 204320539 204321020 -48935563 - L1PB2 LINE L1 -56 6095 5607 389 118 92 13 chr2 204321147 204321223 -48935360 - MER51D LTR ERV1 -76 581 500 2121 73 13 0 chr2 204321595 204321898 -48934685 - L1PB2 LINE L1 -544 5607 5301 727 268 48 26 chr2 204321898 204322129 -48934454 - L2 LINE L2 -952 2362 2127 1928 137 3 23 chr2 204322595 204322895 -48933688 + AluJb SINE Alu 1 294 -18 393 335 88 0 chr2 204323592 204323786 -48932797 + MIR SINE MIR 32 242 -20 2103 138 7 0 chr2 204325093 204325389 -48931194 + AluSx SINE Alu 1 298 -14 586 214 0 0 chr2 204325621 204325724 -48930859 - FRAM SINE Alu -75 101 1 271 284 207 36 chr2 204325843 204326504 -48930079 + L2 LINE L2 1727 2500 -814 2384 112 8 11 chr2 204326505 204326861 -48929722 + THE1A LTR MaLR 1 355 0 11070 107 15 3 chr2 204326861 204328422 -48928161 + THE1A-int LTR MaLR 1 1580 0 750 106 8 24 chr2 204328422 204328545 -48928038 + THE1A LTR MaLR 1 121 -254 2005 230 87 35 chr2 204328648 204329266 -48927317 + L1ME1 LINE L1 4373 5040 -1106 2242 110 0 3 chr2 204329266 204329558 -48927025 + AluSx SINE Alu 1 291 -21 2005 230 87 35 chr2 204329558 204329709 -48926874 + L1ME1 LINE L1 5040 5182 -964 11973 196 75 43 chr2 204329894 204330392 -48926191 + L1M1 LINE L1 17 498 -6504 2273 114 0 7 chr2 204330392 204330698 -48925885 - AluSq SINE Alu -9 304 1 11973 196 75 43 chr2 204330698 204333882 -48922701 + L1M1 LINE L1 498 3996 -3006 1802 171 34 3 chr2 204333882 204334180 -48922403 + AluSx SINE Alu 3 309 -3 11973 196 75 43 chr2 204334180 204336657 -48919926 + L1M1 LINE L1 3996 6392 -610 591 144 93 0 chr2 204336657 204336772 -48919811 + L1MA5 LINE L1 6161 6289 -11 1426 240 37 12 chr2 204336776 204337319 -48919264 + L1ME1 LINE L1 5195 5752 -414 651 319 8 0 chr2 204337336 204337587 -48918996 + L1ME1 LINE L1 5905 6157 -9 3440 133 25 0 chr2 204337752 204338565 -48918018 + L1P5 LINE L1 4963 5791 -360 25 65 0 0 chr2 204339158 204339204 -48917379 + AT_rich Low_complexity Low_complexity 1 46 0 28 29 0 0 chr2 204339403 204339438 -48917145 + AT_rich Low_complexity Low_complexity 1 35 0 476 324 12 0 chr2 204340390 204340560 -48916023 - Charlie8 DNA MER1_type -2141 276 105 232 266 138 11 chr2 204340615 204340709 -48915874 + LTR16C LTR ERVL 354 459 -32 1925 123 25 6 chr2 204341637 204341955 -48914628 + L1MB3 LINE L1 5848 6171 -12 25 0 0 0 chr2 204341955 204341980 -48914603 + AT_rich Low_complexity Low_complexity 1 25 0 415 284 37 12 chr2 204342236 204342398 -48914185 - MIR3 SINE MIR -37 171 6 2373 67 24 0 chr2 204342934 204343231 -48913352 + AluY SINE Alu 1 304 -7 1223 200 4 8 chr2 204343233 204343468 -48913115 + MER65B LTR ERV1 256 489 -42 554 211 22 89 chr2 204343592 204343770 -48912813 + LTR41 LTR ERVL 496 661 -112 708 201 43 12 chr2 204343770 204343934 -48912649 + MER33 DNA MER1_type 1 169 -155 259 269 34 92 chr2 204343952 204344071 -48912512 - MIR SINE MIR -26 236 125 210 280 0 20 chr2 204344059 204344109 -48912474 - L2 LINE L2 -75 3197 3149 * 486 302 36 75 chr2 204344335 204344666 -48911917 - L2 LINE L2 0 3313 2996 322 272 52 73 chr2 204344772 204344908 -48911675 - MER94 DNA DNA 0 134 2 227 167 24 0 chr2 204345240 204345282 -48911301 + MLT1I LTR MaLR 96 138 -271 1596 169 20 20 chr2 204345684 204345979 -48910604 + AluJb SINE Alu 1 295 -17 2325 103 29 37 chr2 204346081 204346459 -48910124 + THE1C LTR MaLR 1 375 0 1792 131 46 14 chr2 204346518 204346800 -48909783 + AluJb SINE Alu 1 291 -21 285 75 0 0 chr2 204346839 204346879 -48909704 + (GAAAA)n Simple_repeat Simple_repeat 3 42 0 2072 76 0 0 chr2 204347608 204347859 -48908724 + AluSx SINE Alu 1 251 -61 201 74 0 0 chr2 204347865 204347892 -48908691 + (A)n Simple_repeat Simple_repeat 1 27 0 577 302 101 19 chr2 204347949 204348257 -48908326 + LTR16C LTR ERVL 127 459 -32 26 64 0 0 chr2 204348553 204348600 -48907983 + AT_rich Low_complexity Low_complexity 1 47 0 416 213 8 66 chr2 204349685 204349807 -48906776 + L1M4 LINE L1 4209 4323 -1823 314 220 110 73 chr2 204349845 204349954 -48906629 + MER21B LTR ERV1 379 516 -89 2087 207 45 7 chr2 204349971 204350526 -48906057 + L1M4 LINE L1 4316 4891 -1255 490 236 124 6 chr2 204350849 204351010 -48905573 + LTR41 LTR ERVL 4 183 -590 2390 80 0 10 chr2 204351382 204351694 -48904889 + AluY SINE Alu 1 309 -2 1521 287 191 33 chr2 204351962 204352406 -48904177 + L2 LINE L2 1577 1950 -1364 1394 134 53 28 chr2 204352406 204352690 -48903893 - L1MA8 LINE L1 -4 6287 5997 1521 287 191 33 chr2 204352690 204353120 -48903463 + L2 LINE L2 1950 2589 -725 238 304 56 56 chr2 204353200 204353361 -48903222 + MLT1K LTR MaLR 414 574 -14 1186 333 63 14 chr2 204353364 204353917 -48902666 + L2 LINE L2 661 1240 -2074 228 329 27 0 chr2 204354845 204354918 -48901665 - L2 LINE L2 -7 3306 3232 609 210 237 11 chr2 204354971 204355157 -48901426 - MIR SINE MIR -21 241 14 457 308 17 29 chr2 204355665 204355837 -48900746 + MIR3 SINE MIR 30 199 -9 315 188 94 12 chr2 204355912 204355997 -48900586 + Charlie5 DNA MER1_type 26 117 -2495 1578 144 82 27 chr2 204356004 204356031 -48900552 + Charlie5 DNA MER1_type 2234 2258 -366 2124 125 0 7 chr2 204356031 204356327 -48900256 - AluSx SINE Alu -17 295 2 1578 144 82 27 chr2 204356327 204356666 -48899917 + Charlie5 DNA MER1_type 2258 2620 -4 1792 195 48 8 chr2 204357499 204357874 -48898709 - MLT1B LTR MaLR 0 390 1 303 233 32 132 chr2 204359802 204359991 -48896592 + L1M2 LINE L1 753 922 -5927 22 0 0 0 chr2 204360552 204360574 -48896009 + GC_rich Low_complexity Low_complexity 1 22 0 2332 61 34 0 chr2 204362308 204362604 -48893979 + AluSg SINE Alu 1 306 -4 200 342 13 13 chr2 204364297 204364373 -48892210 - L2 LINE L2 -4 3309 3234 396 282 59 41 chr2 204364461 204364631 -48891952 - L2 LINE L2 -182 3090 2918 21 107 0 0 chr2 204364779 204364863 -48891720 + AT_rich Low_complexity Low_complexity 1 84 0 184 358 62 0 chr2 204365912 204365993 -48890590 - MIR SINE MIR -60 202 117 383 210 63 49 chr2 204366008 204366151 -48890432 + L1ME LINE L1 5413 5557 -613 1047 138 16 14 chr2 204366306 204366626 -48889957 - MLT1B LTR MaLR -32 358 1 248 293 27 13 chr2 204366626 204366701 -48889882 - MIR SINE MIR -146 116 41 389 138 0 0 chr2 204366857 204366915 -48889668 - AluJ/FRAM SINE Alu -14 288 231 230 267 33 0 chr2 204367315 204367375 -48889208 - L2 LINE L2 -2 3270 3209 1826 177 0 3 chr2 204367596 204367917 -48888666 - AluJo SINE Alu 0 320 1 701 216 5 80 chr2 204368696 204368765 -48887818 + MIR SINE MIR 42 115 -147 1574 171 31 10 chr2 204368765 204369057 -48887526 - AluJb SINE Alu -14 298 1 701 216 5 80 chr2 204369057 204369186 -48887397 + MIR SINE MIR 115 225 -37 193 204 136 0 chr2 204369161 204369205 -48887378 + L2 LINE L2 3218 3267 -5 * 183 156 0 0 chr2 204369242 204369274 -48887309 + A-rich Low_complexity Low_complexity 1 32 0 2260 117 3 0 chr2 204369857 204370164 -48886419 + AluSg SINE Alu 1 308 -2 234 91 0 0 chr2 204370363 204370396 -48886187 + (T)n Simple_repeat Simple_repeat 1 33 0 426 279 14 61 chr2 204370414 204370561 -48886022 - L3 LINE CR1 -1 1576 1437 410 302 50 14 chr2 204371849 204371988 -48884595 - L2 LINE L2 -3 3310 3167 23 0 0 0 chr2 204372242 204372265 -48884318 + AT_rich Low_complexity Low_complexity 1 23 0 2099 132 0 0 chr2 204372471 204372774 -48883809 - AluY SINE Alu -8 303 1 1748 113 60 0 chr2 204374335 204374583 -48882000 - AluSx SINE Alu -11 301 39 395 256 12 49 chr2 204376891 204377055 -48879528 - L1MC4 LINE L1 -3 8039 7882 443 247 103 0 chr2 204377061 204377235 -48879348 - L1MC4 LINE L1 -591 7451 7260 324 0 0 0 chr2 204377241 204377277 -48879306 + (TTG)n Simple_repeat Simple_repeat 1 36 0 1964 107 7 0 chr2 204377277 204377548 -48879035 - AluSc SINE Alu -36 273 1 2188 264 155 43 chr2 204377667 204378419 -48878164 - L1MC4a LINE L1 -849 6959 6293 798 122 0 58 chr2 204378419 204378558 -48878025 + FLAM_C SINE Alu 1 131 -2 2188 264 155 43 chr2 204378558 204379064 -48877519 - L1MC4a LINE L1 -1515 6293 5560 2189 104 0 3 chr2 204379097 204379396 -48877187 + AluY SINE Alu 1 298 -13 2186 71 46 0 chr2 204379973 204380253 -48876330 + AluY SINE Alu 1 293 -18 316 258 22 22 chr2 204380530 204380619 -48875964 - MIR SINE MIR -6 256 168 309 89 0 0 chr2 204381279 204381324 -48875259 + (T)n Simple_repeat Simple_repeat 1 45 0 288 203 0 0 chr2 204381649 204381708 -48874875 - L1ME4a LINE L1 -3 6118 6060 2143 103 0 3 chr2 204382040 204382340 -48874243 + AluY SINE Alu 1 299 -12 200 311 0 0 chr2 204382348 204382393 -48874190 - MIR SINE MIR -13 249 205 554 230 120 30 chr2 204382428 204382628 -48873955 - MIR SINE MIR -44 218 1 719 270 163 48 chr2 204382867 204383371 -48873212 - Charlie7 DNA MER1_type -1992 620 59 2317 86 7 0 chr2 204383476 204383767 -48872816 + AluSc SINE Alu 1 293 -16 328 223 43 53 chr2 204384147 204384241 -48872342 - L2 LINE L2 0 3313 3221 191 320 0 0 chr2 204384442 204384492 -48872091 - MIR SINE MIR -156 106 57 180 0 0 0 chr2 204384572 204384592 -48871991 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 286 274 69 0 chr2 204384671 204384773 -48871810 + MIR SINE MIR 96 204 -58 189 211 0 0 chr2 204384782 204384834 -48871749 + (TA)n Simple_repeat Simple_repeat 2 53 0 2064 143 10 0 chr2 204384978 204385278 -48871305 - AluSx SINE Alu -9 303 1 196 301 0 36 chr2 204386227 204386310 -48870273 + L2 LINE L2 2201 2280 -1034 2482 71 10 0 chr2 204386987 204387295 -48869288 - AluY SINE Alu 0 311 1 21 0 0 0 chr2 204387297 204387318 -48869265 + AT_rich Low_complexity Low_complexity 1 21 0 756 171 16 0 chr2 204387318 204387447 -48869136 - FLAM_A SINE Alu -2 131 1 189 361 0 42 chr2 204387476 204387548 -48869035 + L2 LINE L2 3004 3072 -200 2156 111 3 14 chr2 204389146 204389443 -48867140 + AluSq SINE Alu 1 294 -19 21 71 0 0 chr2 204389547 204389589 -48866994 + AT_rich Low_complexity Low_complexity 1 42 0 2032 130 49 0 chr2 204389996 204390281 -48866302 + AluSg SINE Alu 1 299 -11 1318 103 16 5 chr2 204391439 204391623 -48864960 + AluY SINE Alu 117 302 -9 2197 129 0 0 chr2 204391713 204392015 -48864568 + AluSg SINE Alu 1 302 -8 413 293 99 21 chr2 204392078 204392320 -48864263 + L1MC4a LINE L1 5635 5895 -1913 211 157 39 0 chr2 204392338 204392389 -48864194 + (TATATG)n Simple_repeat Simple_repeat 4 56 0 770 283 77 20 chr2 204392457 204392704 -48863879 + MIR SINE MIR 1 261 -1 229 293 0 0 chr2 204394671 204394729 -48861854 + (TATATG)n Simple_repeat Simple_repeat 3 60 0 1351 169 143 27 chr2 204395337 204395638 -48860945 - MER1B DNA MER1_type -1 336 1 27 73 0 0 chr2 204395996 204396051 -48860532 + AT_rich Low_complexity Low_complexity 1 55 0 1224 163 83 0 chr2 204396495 204396747 -48859836 + MER82 DNA MER2_type 1 273 -380 3517 119 56 10 chr2 204396887 204397477 -48859106 + LTR19C LTR ERV1 163 779 0 2121 295 54 24 chr2 204397506 204398563 -48858020 + LTR19C-int LTR ERV1 30 1118 -5878 1113 184 44 44 chr2 204398570 204398820 -48857763 + LTR19C-int LTR ERV1 2057 2306 -6613 16050 186 42 56 chr2 204398848 204400142 -48856441 + LTR25-int LTR ERV1 1127 2437 -4981 1672 95 13 17 chr2 204400142 204400374 -48856209 - AluSg/x SINE Alu -11 301 71 16050 186 42 56 chr2 204400374 204404334 -48852249 + LTR25-int LTR ERV1 2437 6242 -1176 2150 126 7 0 chr2 204404334 204404636 -48851947 + AluSx SINE Alu 1 304 -8 16050 186 42 56 chr2 204404636 204405052 -48851531 + LTR25-int LTR ERV1 6242 6662 -756 1223 75 6 6 chr2 204405081 204405273 -48851310 - AluSc SINE Alu 0 310 119 1392 139 4 4 chr2 204405391 204405649 -48850934 + LTR25-int LTR ERV1 6738 6995 -1 2645 128 34 14 chr2 204405788 204406234 -48850349 + LTR19C LTR ERV1 164 618 -161 414 86 0 0 chr2 204406234 204406292 -48850291 - AluSg/x SINE Alu -86 224 167 1179 33 13 13 chr2 204406305 204406458 -48850125 + LTR19C LTR ERV1 627 779 0 * 1290 244 26 20 chr2 204406458 204406805 -48849778 + MER82 DNA MER2_type 281 629 -24 719 166 104 6 chr2 204407383 204407546 -48849037 - MER58A DNA MER1_type -1 223 45 2570 65 0 0 chr2 204407813 204408122 -48848461 + AluY SINE Alu 1 309 -2 1638 202 10 0 chr2 204408346 204408638 -48847945 + AluJo SINE Alu 1 295 -17 2134 116 6 25 chr2 204408639 204408957 -48847626 + AluSq SINE Alu 1 312 -1 278 290 19 9 chr2 204410224 204410331 -48846252 + MLT1L LTR MaLR 508 615 0 238 331 62 0 chr2 204410391 204410536 -48846047 + MER103 DNA DNA 1 154 -12 306 0 0 0 chr2 204411094 204411128 -48845455 + (CA)n Simple_repeat Simple_repeat 2 35 0 1812 142 11 4 chr2 204411228 204411535 -48845048 + AluJb SINE Alu 1 309 0 457 309 74 12 chr2 204412825 204412987 -48843596 - MIR SINE MIR -71 191 20 1795 160 9 31 chr2 204413132 204413451 -48843132 + AluJo SINE Alu 1 312 0 1836 155 0 28 chr2 204413746 204414064 -48842519 - AluJo SINE Alu 0 310 1 1875 176 0 7 chr2 204414129 204414425 -48842158 - AluJb SINE Alu -18 294 1 233 163 0 0 chr2 204414425 204414474 -48842109 - L1M LINE L1 -860 5304 5256 2849 55 6 3 chr2 204414913 204415277 -48841306 + L1PA8 LINE L1 5807 6171 -1 260 219 184 9 chr2 204415280 204415394 -48841189 + L1ME4a LINE L1 5980 6113 -8 297 0 0 0 chr2 204416855 204416888 -48839695 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 315 0 0 0 chr2 204417069 204417104 -48839479 + (CA)n Simple_repeat Simple_repeat 2 36 0 291 284 120 43 chr2 204417287 204417445 -48839138 - MIR SINE MIR 0 262 83 1114 203 129 15 chr2 204417445 204417770 -48838813 - MLT1A1 LTR MaLR 0 365 4 291 284 120 43 chr2 204417770 204417819 -48838764 - MIR SINE MIR -179 83 39 22 94 0 0 chr2 204418190 204418254 -48838329 + AT_rich Low_complexity Low_complexity 1 64 0 2538 57 0 0 chr2 204418325 204418621 -48837962 + AluY SINE Alu 1 296 -15 744 250 63 80 chr2 204418677 204418704 -48837879 - L1ME4a LINE L1 -237 5884 5858 1977 135 0 0 chr2 204418704 204419046 -48837537 + AluSx SINE Alu 1 342 0 744 250 63 80 chr2 204419046 204419557 -48837026 - L1ME4a LINE L1 -263 5858 5354 333 0 0 0 chr2 204420491 204420528 -48836055 + (CA)n Simple_repeat Simple_repeat 1 37 0 203 278 19 0 chr2 204420582 204420636 -48835947 + L2 LINE L2 3201 3255 -17 256 301 117 10 chr2 204420718 204420821 -48835762 - MIR SINE MIR -62 146 33 763 285 32 4 chr2 204421078 204421331 -48835252 - MIR SINE MIR -1 261 2 2210 96 67 20 chr2 204421363 204421719 -48834864 + THE1C LTR MaLR 1 373 -2 704 217 76 5 chr2 204421940 204422124 -48834459 + MIR SINE MIR 64 260 -2 1906 98 0 11 chr2 204422462 204422738 -48833845 + AluSx SINE Alu 1 273 -39 436 267 33 0 chr2 204422886 204423006 -48833577 - MIR SINE MIR -17 245 122 439 237 74 0 chr2 204423139 204423274 -48833309 - MLT1L LTR MaLR -5 610 466 287 221 213 15 chr2 204423341 204423477 -48833106 - MLT1L LTR MaLR -414 201 39 1770 97 29 7 chr2 204424680 204424958 -48831625 - L1MA5A LINE L1 0 6297 6014 216 0 0 0 chr2 204425054 204425078 -48831505 + (T)n Simple_repeat Simple_repeat 1 24 0 1687 246 40 65 chr2 204427664 204428314 -48828269 - MER21B LTR ERV1 -124 739 106 352 200 27 0 chr2 204428358 204428433 -48828150 - MER21B LTR ERV1 -767 96 20 21 36 0 0 chr2 204428461 204428489 -48828094 + AT_rich Low_complexity Low_complexity 1 28 0 410 304 83 0 chr2 204428523 204428789 -48827794 - L1M4 LINE L1 -2369 3777 3490 1117 197 8 5 chr2 204428791 204429123 -48827460 - MER57A LTR ERV1 0 403 10 307 277 39 0 chr2 204429149 204429279 -48827304 - L1M4 LINE L1 -2672 3474 3340 507 17 0 0 chr2 204429431 204429491 -48827092 + (TG)n Simple_repeat Simple_repeat 1 60 0 1746 115 28 4 chr2 204429522 204429774 -48826809 - AluSx SINE Alu -54 258 1 437 225 134 81 chr2 204429776 204429985 -48826598 - HERV16 LTR ERVL -2667 2329 2110 299 174 83 18 chr2 204430086 204430158 -48826425 - L1MEc LINE L1 -5563 833 762 39246 61 10 3 chr2 204430158 204436270 -48820313 - L1PA5 LINE L1 -1 6153 5 429 270 125 29 chr2 204436273 204436539 -48820044 + L1MEc LINE L1 977 1216 -5347 351 0 0 0 chr2 204436539 204436578 -48820005 + (TC)n Simple_repeat Simple_repeat 2 40 0 315 0 0 0 chr2 204436577 204436612 -48819971 + (TA)n Simple_repeat Simple_repeat 1 35 0 * 429 270 125 29 chr2 204436578 204436872 -48819711 + L1MEc LINE L1 1216 1687 -4876 690 166 6 32 chr2 204436873 204437030 -48819553 + LTR23 LTR ERV1 1 153 -284 934 155 7 26 chr2 204437030 204437185 -48819398 + FRAM SINE Alu 2 153 -23 685 146 54 15 chr2 204437216 204437346 -48819237 + LTR23 LTR ERV1 303 437 0 2325 102 3 0 chr2 204437703 204438006 -48818577 + AluSx SINE Alu 1 304 -8 1761 197 0 3 chr2 204438257 204438566 -48818017 + AluJo SINE Alu 1 308 -4 714 180 21 52 chr2 204438884 204439078 -48817505 - L1MC1 LINE L1 -8 6325 6138 1375 163 30 0 chr2 204439093 204439363 -48817220 - L1MC2 LINE L1 -11 6333 6056 224 361 0 14 chr2 204439717 204439789 -48816794 - L2 LINE L2 -209 3063 2993 2146 140 3 0 chr2 204440013 204440320 -48816263 + AluSx SINE Alu 3 310 -2 769 142 8 24 chr2 204440685 204440812 -48815771 - THE1A LTR MaLR 0 355 231 394 335 84 6 chr2 204441246 204441425 -48815158 - MIR SINE MIR -30 232 40 543 16 0 0 chr2 204441995 204442059 -48814524 + (TG)n Simple_repeat Simple_repeat 1 64 0 23 68 0 0 chr2 204443189 204443233 -48813350 + AT_rich Low_complexity Low_complexity 1 44 0 22 56 0 0 chr2 204443877 204443913 -48812670 + AT_rich Low_complexity Low_complexity 1 36 0 2472 89 0 0 chr2 204443999 204444312 -48812271 - AluSq SINE Alu 0 313 1 1200 249 65 66 chr2 204444360 204444928 -48811655 + L2 LINE L2 2752 3310 -3 6596 31 4 5 chr2 204446486 204447269 -48809314 - L1PA4 LINE L1 -1 6154 5373 * 16007 36 7 2 chr2 204447268 204449196 -48807387 + L1PA4 LINE L1 3439 5376 -770 2355 126 11 26 chr2 204449196 204449576 -48807007 - L1PA16 LINE L1 0 6166 5793 2368 92 3 0 chr2 204449676 204449971 -48806612 + L1PA10 LINE L1 5864 6159 -9 1860 253 77 15 chr2 204450516 204450923 -48805660 + L1ME3 LINE L1 5457 5922 -240 2031 105 6 57 chr2 204450923 204451237 -48805346 + AluSg SINE Alu 1 298 -12 1860 253 77 15 chr2 204451237 204451494 -48805089 + L1ME3 LINE L1 5922 6162 0 1949 153 7 0 chr2 204451519 204451807 -48804776 - AluJb SINE Alu -22 290 1 309 235 82 0 chr2 204451868 204451953 -48804630 + MIR SINE MIR 53 144 -118 277 103 0 0 chr2 204452007 204452046 -48804537 + MADE1 DNA Mariner 1 39 -41 2081 122 0 0 chr2 204452046 204452324 -48804259 - AluSg SINE Alu -22 288 11 507 295 236 10 chr2 204452590 204452878 -48803705 - L2 LINE L2 -1 3312 2960 408 287 100 7 chr2 204453174 204453322 -48803261 + MIR SINE MIR 30 191 -63 253 173 102 110 chr2 204453946 204454073 -48802510 + MIR SINE MIR 86 211 -51 1817 139 84 0 chr2 204455549 204455716 -48800867 - AluJb SINE Alu -1 311 159 288 0 0 0 chr2 204455716 204455748 -48800835 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 1817 139 84 0 chr2 204455748 204455867 -48800716 - AluJb SINE Alu -153 159 1 803 281 146 42 chr2 204456033 204456532 -48800051 - LTR67 LTR ERVL -3 554 4 438 178 56 11 chr2 204456572 204456662 -48799921 - Charlie1 DNA MER1_type -1 2760 2667 1941 169 145 10 chr2 204457047 204457460 -48799123 - L1MC3 LINE L1 0 7785 7317 236 282 30 44 chr2 204457891 204458023 -48798560 + MIR SINE MIR 17 146 -71 399 286 18 9 chr2 204458125 204458237 -48798346 - MIR SINE MIR -121 141 29 337 277 157 19 chr2 204458382 204458541 -48798042 + MIR SINE MIR 81 261 -1 367 320 83 33 chr2 204459302 204459483 -48797100 + L2 LINE L2 3118 3307 -6 2161 104 3 19 chr2 204459507 204459816 -48796767 - AluSg SINE Alu -6 304 1 270 0 0 0 chr2 204459822 204459852 -48796731 + (TTA)n Simple_repeat Simple_repeat 1 30 0 313 291 48 0 chr2 204459936 204460039 -48796544 - MIR SINE MIR -71 191 84 280 239 171 0 chr2 204460166 204460254 -48796329 - MIR SINE MIR -122 140 38 234 271 0 14 chr2 204460535 204460605 -48795978 - L2 LINE L2 -293 3020 2952 915 136 0 7 chr2 204460643 204460783 -48795800 - L1MB4 LINE L1 0 6180 6042 3107 92 32 9 chr2 204460786 204461221 -48795362 + MLT2A2 LTR ERVL 1 445 -8 340 165 136 51 chr2 204461257 204461279 -48795304 - L1MB4 LINE L1 -187 5996 5977 2161 122 7 0 chr2 204461279 204461573 -48795010 - AluSx SINE Alu -15 297 2 340 165 136 51 chr2 204461573 204461726 -48794857 - L1MB4 LINE L1 -206 5977 5806 263 28 28 0 chr2 204462116 204462152 -48794431 + (CA)n Simple_repeat Simple_repeat 2 38 0 424 48 32 0 chr2 204462197 204462260 -48794323 + (CA)n Simple_repeat Simple_repeat 2 66 0 279 325 0 0 chr2 204462902 204462982 -48793601 + L2 LINE L2 3234 3313 0 602 253 34 17 chr2 204464155 204464333 -48792250 + MIR SINE MIR 16 196 -66 463 291 103 6 chr2 204464630 204464805 -48791778 + MLT1J LTR MaLR 115 306 -205 2927 110 76 86 chr2 204464841 204465421 -48791162 - MER4B LTR ERV1 -36 574 1 1122 105 0 13 chr2 204465457 204465609 -48790974 + AluY SINE Alu 1 150 -161 2321 64 0 3 chr2 204465760 204466071 -48790512 - AluY SINE Alu 0 310 1 230 271 0 0 chr2 204466102 204466161 -48790422 + L2 LINE L2 3244 3302 -11 2429 244 55 2 chr2 204466207 204466788 -48789795 + MLT1E2 LTR MaLR 13 624 -2 217 196 232 0 chr2 204467111 204467167 -48789416 - L2 LINE L2 -13 3300 3232 297 305 61 0 chr2 204467879 204468010 -48788573 - L3 LINE CR1 -198 1379 1241 466 318 93 13 chr2 204468233 204468469 -48788114 - L3 LINE CR1 -491 1086 832 1752 164 10 3 chr2 204468471 204468769 -48787814 + AluSq SINE Alu 1 300 -13 199 292 0 0 chr2 204469125 204469173 -48787410 + L2 LINE L2 3251 3298 -15 224 282 13 26 chr2 204469175 204469253 -48787330 + (TGGA)n Simple_repeat Simple_repeat 2 78 0 2099 120 3 0 chr2 204469906 204470198 -48786385 + AluSx SINE Alu 1 293 -19 97 81 0 0 chr2 204470299 204470522 -48786061 + GC_rich Low_complexity Low_complexity 1 223 0 53 63 0 0 chr2 204470548 204470643 -48785940 + GC_rich Low_complexity Low_complexity 1 95 0 279 277 53 11 chr2 204470836 204470930 -48785653 + MIR SINE MIR 111 208 -54 515 208 0 20 chr2 204471252 204471353 -48785230 + MER63 DNA MER1_type 13 737 -99 2221 101 0 10 chr2 204471413 204471720 -48784863 + AluY SINE Alu 1 304 -7 1795 153 0 57 chr2 204472219 204472533 -48784050 + AluJo SINE Alu 2 297 -15 365 211 26 0 chr2 204475018 204475094 -48781489 - MER63 DNA MER1_type 0 1060 983 1729 144 83 0 chr2 204475263 204475527 -48781056 - AluSx SINE Alu -26 286 1 436 328 153 24 chr2 204475545 204476249 -48780334 - L2 LINE L2 -556 2758 1964 815 151 0 8 chr2 204476263 204476389 -48780194 + AluJb SINE Alu 162 286 -26 272 313 86 37 chr2 204476393 204476636 -48779947 - L2 LINE L2 -1354 1960 1706 391 311 143 12 chr2 204476879 204477040 -48779543 + MIR SINE MIR 74 255 -7 215 261 0 0 chr2 204480702 204480748 -48775835 + (TGAA)n Simple_repeat Simple_repeat 1 46 0 338 350 73 60 chr2 204481025 204481339 -48775244 - L2 LINE L2 -5 3267 2950 2553 142 56 15 chr2 204481342 204481751 -48774832 - MSTB LTR MaLR 0 426 1 21 57 0 0 chr2 204482488 204482523 -48774060 + AT_rich Low_complexity Low_complexity 1 35 0 2098 119 3 0 chr2 204483287 204483573 -48773010 + AluSc SINE Alu 7 293 -16 525 273 47 0 chr2 204484587 204484715 -48771868 - L2 LINE L2 -2 3270 3137 1727 163 0 4 chr2 204486220 204486478 -48770105 - AluJo SINE Alu -44 268 12 1840 148 31 3 chr2 204486729 204487020 -48769563 - AluSx SINE Alu -13 299 1 313 273 68 61 chr2 204488599 204488779 -48767804 - MIR3 SINE MIR -6 202 23 951 230 67 0 chr2 204488853 204489062 -48767521 + MER58A DNA MER1_type 2 224 0 2270 84 0 10 chr2 204489117 204489415 -48767168 + AluY SINE Alu 1 295 -16 381 290 103 65 chr2 204489731 204489886 -48766697 + L2 LINE L2 3112 3272 0 1989 135 0 4 chr2 204492674 204492955 -48763628 + AluSx SINE Alu 1 280 -32 584 299 43 39 chr2 204493155 204493409 -48763174 - MIR SINE MIR 0 262 8 1794 143 0 57 chr2 204493522 204493836 -48762747 + AluJo SINE Alu 3 298 -14 25 0 0 0 chr2 204494272 204494297 -48762286 + AT_rich Low_complexity Low_complexity 1 25 0 2301 97 0 35 chr2 204496034 204496353 -48760230 + AluSq SINE Alu 1 308 -5 233 312 43 11 chr2 204496674 204496767 -48759816 - MER5A DNA MER1_type -21 168 73 278 250 62 25 chr2 204496675 204496755 -48759828 + MER5B DNA MER1_type 21 103 -75 212 315 0 0 chr2 204496806 204496860 -48759723 + MER5A DNA MER1_type 112 165 -24 21 0 0 0 chr2 204497969 204497990 -48758593 + AT_rich Low_complexity Low_complexity 1 21 0 221 395 0 51 chr2 204498375 204498570 -48758013 + L2 LINE L2 2905 3089 -183 551 42 0 0 chr2 204498620 204498691 -48757892 - L1PA5 LINE L1 -3 6151 6081 180 280 20 0 chr2 204499338 204499388 -48757195 + MIR SINE MIR 132 182 -80 864 227 19 1 chr2 204499459 204499651 -48756932 + MIR SINE MIR 1 197 -62 2018 170 0 0 chr2 204500028 204500334 -48756249 + 7SLRNA srpRNA srpRNA 3 308 -12 439 280 166 52 chr2 204501808 204502133 -48754450 + L2 LINE L2 2947 3308 -5 635 291 91 4 chr2 204502253 204502483 -48754100 + MIR SINE MIR 3 252 -10 270 231 0 0 chr2 204503553 204503605 -48752978 + L2 LINE L2 3187 3238 -34 294 252 140 9 chr2 204503875 204503982 -48752601 - MIR SINE MIR -108 154 34 194 189 0 19 chr2 204504029 204504082 -48752501 + (CATATA)n Simple_repeat Simple_repeat 5 56 0 212 143 24 0 chr2 204505164 204505206 -48751377 + CT-rich Low_complexity Low_complexity 3 45 0 476 311 90 16 chr2 204505246 204505490 -48751093 - MLT1I LTR MaLR -3 406 145 201 330 57 23 chr2 204505524 204505612 -48750971 + L2 LINE L2 3177 3267 -5 4553 78 2 13 chr2 204506593 204507219 -48749364 + L1PA10 LINE L1 5549 6167 -1 228 174 35 58 chr2 204507955 204508041 -48748542 + A-rich Low_complexity Low_complexity 5 88 0 2544 68 9 3 chr2 204508155 204508557 -48748026 - L1P4 LINE L1 -555 5613 5210 186 211 67 111 chr2 204509448 204509538 -48747045 - L3 LINE CR1 -1249 328 243 192 152 0 0 chr2 204509629 204509662 -48746921 + T-rich Low_complexity Low_complexity 1 33 0 265 77 0 0 chr2 204509776 204509815 -48746768 - tRNA-Gly-GGG tRNA tRNA -35 39 1 4371 160 82 8 chr2 204510013 204510952 -48745631 - L1MC3 LINE L1 -16 7769 6762 1751 188 57 3 chr2 204512189 204512525 -48744058 - MLT1A1 LTR MaLR -1 364 11 2181 109 6 3 chr2 204512898 204513210 -48743373 - AluSq SINE Alu 0 313 1 244 250 0 0 chr2 204514069 204514125 -48742458 + (TA)n Simple_repeat Simple_repeat 2 57 0 472 269 85 31 chr2 204514305 204514528 -48742055 + MER102b DNA MER1_type 106 340 -1 197 32 0 32 chr2 204514760 204514791 -48741792 + (TAAAAA)n Simple_repeat Simple_repeat 5 34 0 1766 160 10 7 chr2 204517740 204518034 -48738549 + AluJb SINE Alu 1 295 -17 1697 133 66 14 chr2 204518043 204518329 -48738254 + AluJb SINE Alu 7 307 -5 25 0 0 0 chr2 204518589 204518614 -48737969 + AT_rich Low_complexity Low_complexity 1 25 0 23 33 0 0 chr2 204522068 204522098 -48734485 + AT_rich Low_complexity Low_complexity 1 30 0 500 288 93 9 chr2 204523186 204523401 -48733182 + MIR SINE MIR 2 234 -28 2275 133 3 6 chr2 204523606 204523968 -48732615 - MER46B DNA MER2_type 0 236 1 260 264 0 38 chr2 204524399 204524505 -48732078 - L1M LINE L1 -697 5424 5323 942 170 21 0 chr2 204524520 204524714 -48731869 - L1MB3 LINE L1 -3 6180 5983 345 188 47 27 chr2 204524808 204524957 -48731626 + (GGGTG)n Simple_repeat Simple_repeat 3 154 0 215 261 70 78 chr2 204525614 204525729 -48730854 - MIR SINE MIR -121 141 28 493 253 48 30 chr2 204526062 204526228 -48730355 - MER5A DNA MER1_type -13 176 8 217 229 0 0 chr2 204526328 204526376 -48730207 - MIR SINE MIR -124 138 91 271 336 79 21 chr2 204526982 204527122 -48729461 - L2 LINE L2 -1 3271 3124 468 234 57 71 chr2 204527150 204527291 -48729292 + MER91A DNA MER1_type 58 196 0 464 269 69 7 chr2 204528581 204528726 -48727857 - MIR SINE MIR 0 262 109 560 302 121 28 chr2 204528789 204529460 -48727123 - L2 LINE L2 -4 3309 2572 2448 71 0 0 chr2 204530171 204530480 -48726103 - AluY SINE Alu -2 309 1 261 98 0 0 chr2 204530682 204530723 -48725860 + (TG)n Simple_repeat Simple_repeat 2 42 0 345 222 122 0 chr2 204530787 204530877 -48725706 - FLAM_A SINE Alu -4 129 29 567 0 0 0 chr2 204531331 204531394 -48725189 + (TG)n Simple_repeat Simple_repeat 2 64 0 319 227 62 11 chr2 204532709 204532814 -48723769 + MER20B DNA MER1_type 89 202 -17 3629 127 10 2 chr2 204533006 204533589 -48722994 - L1PA13 LINE L1 -4 6159 5572 1736 145 14 27 chr2 204533598 204533894 -48722689 - AluJo SINE Alu -20 292 1 2163 114 0 0 chr2 204534236 204534547 -48722036 - AluSc SINE Alu 0 311 1 22 80 0 0 chr2 204534954 204535004 -48721579 + AT_rich Low_complexity Low_complexity 1 50 0 2372 93 0 31 chr2 204535099 204535421 -48721162 - AluSx SINE Alu 0 312 1 21 36 0 0 chr2 204535456 204535484 -48721099 + AT_rich Low_complexity Low_complexity 1 28 0 2261 99 20 0 chr2 204536339 204536633 -48719950 - AluSx SINE Alu -12 300 1 4878 81 16 1 chr2 204536694 204537363 -48719220 - L1PA13 LINE L1 -1 6162 5484 559 257 69 0 chr2 204538350 204538494 -48718089 - MIR3 SINE MIR -36 172 19 379 300 144 11 chr2 204538562 204538742 -48717841 - MIR SINE MIR -12 250 47 539 221 0 0 chr2 204539715 204539819 -48716764 - U13 snRNA snRNA 0 104 1 295 298 158 0 chr2 204541924 204542038 -48714545 - L2 LINE L2 -2 3270 3139 1078 130 13 0 chr2 204543030 204543184 -48713399 + AluSx SINE Alu 3 158 -154 304 305 57 9 chr2 204544335 204544440 -48712143 - MIR3 SINE MIR -52 156 47 2129 139 0 3 chr2 204546045 204546354 -48710229 - AluJb SINE Alu -4 308 1 27 62 0 0 chr2 204547233 204547281 -48709302 + AT_rich Low_complexity Low_complexity 1 48 0 181 0 0 65 chr2 204547293 204547324 -48709259 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 221 349 164 27 chr2 204547569 204547715 -48708868 - L2 LINE L2 -5 3267 3102 730 302 137 67 chr2 204547966 204548441 -48708142 - L2 LINE L2 -353 2961 2521 372 244 68 107 chr2 204548441 204548646 -48707937 + MER117 DNA MER1_type 1 197 0 730 302 137 67 chr2 204548646 204549329 -48707254 - L2 LINE L2 -793 2521 1722 331 151 11 43 chr2 204550087 204550272 -48706311 + (CACCC)n Simple_repeat Simple_repeat 2 180 0 2266 147 62 50 chr2 204550544 204550967 -48705616 + MSTA LTR MaLR 1 428 0 191 277 75 32 chr2 204553661 204553755 -48702828 - L2 LINE L2 -1813 1501 1404 2596 206 98 65 chr2 204554279 204554924 -48701659 - L1MD3 LINE L1 -229 7766 7078 3275 86 7 5 chr2 204554924 204555354 -48701229 - L1PB1 LINE L1 -1 6150 5720 2596 206 98 65 chr2 204555354 204555670 -48700913 - L1MD3 LINE L1 -917 7078 6774 1207 121 0 17 chr2 204555794 204555991 -48700592 + AluSg/x SINE Alu 125 312 0 261 57 0 0 chr2 204556162 204556197 -48700386 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 194 353 35 24 chr2 204557110 204557195 -48699388 + MIR SINE MIR 20 105 -157 2390 97 0 10 chr2 204560409 204560719 -48695864 - AluSx SINE Alu -5 307 1 23 0 0 0 chr2 204560869 204560892 -48695691 + AT_rich Low_complexity Low_complexity 1 23 0 2299 97 3 0 chr2 204560895 204561193 -48695390 - AluSp SINE Alu -14 299 1 2240 97 7 0 chr2 204561305 204561605 -48694978 - AluSp SINE Alu -11 302 1 514 234 98 34 chr2 204562056 204562261 -48694322 + Charlie8 DNA MER1_type 53 270 -2147 439 308 89 43 chr2 204562446 204562816 -48693767 - L2 LINE L2 -357 2957 2571 235 298 106 50 chr2 204562991 204563132 -48693451 - MIR SINE MIR -77 185 37 881 152 15 121 chr2 204563557 204563755 -48692828 + MER5B DNA MER1_type 1 177 -1 2062 105 0 65 chr2 204564275 204564599 -48691984 - AluSc SINE Alu -6 303 1 2012 130 3 3 chr2 204565098 204565397 -48691186 + AluSx SINE Alu 1 299 -13 266 303 56 0 chr2 204567302 204567391 -48689192 - L2 LINE L2 -17 3296 3203 1491 171 0 0 chr2 204568278 204568517 -48688066 - AluSg SINE Alu -10 300 62 2235 92 20 3 chr2 204569269 204569561 -48687022 - AluSc SINE Alu -12 297 1 1509 127 0 19 chr2 204569942 204570155 -48686428 - AluSq SINE Alu -104 209 1 834 179 0 21 chr2 204570190 204570335 -48686248 + FLAM_C SINE Alu 1 142 -1 21 36 0 0 chr2 204570898 204570926 -48685657 + AT_rich Low_complexity Low_complexity 1 28 0 2307 103 0 3 chr2 204571699 204572009 -48684574 - AluSc SINE Alu 0 309 1 291 321 15 51 chr2 204573742 204573879 -48682704 + L2 LINE L2 2964 3095 -177 288 65 0 65 chr2 204573909 204573955 -48682628 + L1MA9 LINE L1 6270 6312 0 2114 94 18 0 chr2 204574113 204574411 -48682172 + AluSc SINE Alu 1 303 0 321 47 0 0 chr2 204575695 204575727 -48680856 + (CA)n Simple_repeat Simple_repeat 1 75 0 321 47 0 0 chr2 204575727 204575770 -48680813 + (CA)n Simple_repeat Simple_repeat 2 44 0 207 0 0 0 chr2 204577393 204577416 -48679167 + (TGGA)n Simple_repeat Simple_repeat 4 26 0 2408 30 4 0 chr2 204578050 204578319 -48678264 + L1PA5 LINE L1 5879 6148 -6 2505 52 3 0 chr2 204579240 204579531 -48677052 - AluY SINE Alu -19 292 1 188 233 0 23 chr2 204579947 204579990 -48676593 + MIR SINE MIR 89 130 -78 199 238 99 69 chr2 204581350 204581451 -48675132 + L2 LINE L2 3149 3252 -20 2096 134 0 19 chr2 204581539 204581853 -48674730 + AluJb SINE Alu 1 308 -4 424 318 8 8 chr2 204581987 204582116 -48674467 + MIR SINE MIR 8 136 -126 231 213 0 93 chr2 204582218 204582293 -48674290 + G-rich Low_complexity Low_complexity 1 68 0 116 103 0 0 chr2 204582293 204582458 -48674125 + GC_rich Low_complexity Low_complexity 1 165 0 44 93 0 0 chr2 204582491 204582545 -48674038 + GC_rich Low_complexity Low_complexity 1 54 0 194 74 0 0 chr2 204582553 204582563 -48674020 + (C)n Simple_repeat Simple_repeat 1 10 -17 180 0 0 0 chr2 204582563 204582583 -48674000 + (G)n Simple_repeat Simple_repeat 1 20 0 194 74 0 0 chr2 204582583 204582599 -48673984 + (C)n Simple_repeat Simple_repeat 9 27 0 386 297 68 74 chr2 204582608 204583002 -48673581 - L1M2 LINE L1 -5929 920 529 * 422 317 86 60 chr2 204582773 204583252 -48673331 + L1M2 LINE L1 528 1018 -5831 1951 35 0 13 chr2 204584609 204584838 -48671745 - L1PA5 LINE L1 -6 6148 5923 263 228 7 161 chr2 204585565 204585714 -48670869 - MER5A DNA MER1_type -1 188 63 * 308 216 20 73 chr2 204585637 204585735 -48670848 + MER5A DNA MER1_type 63 144 -34 2497 54 0 3 chr2 204585753 204586050 -48670533 + AluY SINE Alu 1 296 -15 610 213 33 0 chr2 204586159 204586281 -48670302 - MER63C DNA MER1_type -288 642 517 441 200 90 0 chr2 204586281 204586381 -48670202 + MER58A DNA MER1_type 3 111 0 363 169 31 0 chr2 204586381 204586433 -48670150 + MER58A DNA MER1_type 164 217 -7 731 173 181 123 chr2 204586451 204586938 -48669645 - MER63C DNA MER1_type -405 525 11 1837 110 72 6 chr2 204586973 204587292 -48669291 - L1PA11 LINE L1 0 6174 5835 13296 132 5 15 chr2 204587411 204590252 -48666331 - L1PA11 LINE L1 -120 6054 3239 644 305 131 50 chr2 204590259 204590790 -48665793 + L2 LINE L2 2458 3123 -190 189 0 0 0 chr2 204590790 204590811 -48665772 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 644 305 131 50 chr2 204590811 204591014 -48665569 + L2 LINE L2 3123 3308 -5 284 373 72 38 chr2 204591363 204591655 -48664928 + L2 LINE L2 2935 3236 -36 248 137 147 168 chr2 204591686 204591781 -48664802 - L3 LINE CR1 -280 1297 1205 21 82 0 0 chr2 204592051 204592100 -48664483 + AT_rich Low_complexity Low_complexity 1 49 0 1577 210 63 14 chr2 204592399 204592746 -48663837 + MLT1A1 LTR MaLR 1 364 -1 217 329 25 0 chr2 204592755 204592834 -48663749 + MIR SINE MIR 181 261 -1 189 0 0 0 chr2 204597198 204597219 -48659364 + (TG)n Simple_repeat Simple_repeat 2 22 0 471 339 52 17 chr2 204597222 204597396 -48659187 + MIR3 SINE MIR 26 205 -3 415 311 16 26 chr2 204597639 204597829 -48658754 + MER5A DNA MER1_type 2 189 0 393 246 7 70 chr2 204598588 204598730 -48657853 + L1ME3A LINE L1 5909 6041 -129 1452 162 0 36 chr2 204599858 204600111 -48656472 + AluJo SINE Alu 1 244 -68 335 333 11 0 chr2 204600610 204600700 -48655883 + MIR3 SINE MIR 77 167 -41 387 41 0 0 chr2 204601230 204601279 -48655304 + (TG)n Simple_repeat Simple_repeat 1 49 0 22 80 0 0 chr2 204601320 204601370 -48655213 + AT_rich Low_complexity Low_complexity 1 50 0 417 211 41 10 chr2 204601416 204601537 -48655046 - MER20B DNA MER1_type -19 200 75 193 279 44 29 chr2 204604310 204604378 -48652205 + MIR SINE MIR 20 88 -174 2160 112 0 37 chr2 204607467 204607788 -48648795 - AluSx SINE Alu -3 309 1 194 395 124 0 chr2 204609653 204609782 -48646801 + MIR3 SINE MIR 2 146 -62 243 79 0 0 chr2 204609988 204610026 -48646557 + (T)n Simple_repeat Simple_repeat 1 38 0 1198 184 22 15 chr2 204610642 204610913 -48645670 + MER96B DNA MER1_type? 145 417 0 227 244 0 22 chr2 204611249 204611339 -48645244 + GA-rich Low_complexity Low_complexity 3 90 0 2216 108 0 0 chr2 204612537 204612824 -48643759 - AluSc SINE Alu -16 293 7 21 57 0 0 chr2 204613586 204613621 -48642962 + AT_rich Low_complexity Low_complexity 1 35 0 229 172 31 0 chr2 204614120 204614184 -48642399 + L1MA8 LINE L1 6226 6291 0 308 222 14 0 chr2 204614918 204614990 -48641593 + MER112 DNA MER1_type 1 73 -187 24 0 0 0 chr2 204615480 204615504 -48641079 + AT_rich Low_complexity Low_complexity 1 24 0 1579 191 55 72 chr2 204616559 204617031 -48639552 + MER31B LTR ERV1 1 464 -2 669 269 72 92 chr2 204619083 204619432 -48637151 + L2 LINE L2 2931 3272 0 482 288 150 18 chr2 204620875 204621101 -48635482 - MIR SINE MIR -5 257 2 23 0 0 0 chr2 204621187 204621210 -48635373 + AT_rich Low_complexity Low_complexity 1 23 0 31 0 0 0 chr2 204623649 204623680 -48632903 + AT_rich Low_complexity Low_complexity 1 31 0 200 292 0 0 chr2 204625647 204625695 -48630888 + L2 LINE L2 3251 3298 -15 228 308 0 13 chr2 204625697 204625775 -48630808 + (TGGA)n Simple_repeat Simple_repeat 2 78 0 1796 118 4 0 chr2 204626273 204626527 -48630056 + AluSx SINE Alu 54 308 -4 2470 87 3 0 chr2 204628028 204628340 -48628243 + AluSp SINE Alu 1 313 0 316 200 20 10 chr2 204628903 204629003 -48627580 + (TATATG)n Simple_repeat Simple_repeat 2 102 0 1933 155 30 6 chr2 204629024 204629359 -48627224 + MER2 DNA MER2_type 2 344 0 204 40 0 0 chr2 204630220 204630245 -48626338 + (A)n Simple_repeat Simple_repeat 1 25 0 237 188 188 12 chr2 204631178 204631258 -48625325 + MLT1L LTR MaLR 4 97 -518 299 250 158 33 chr2 204631433 204631617 -48624966 + MLT1J LTR MaLR 305 511 0 1112 89 0 57 chr2 204632619 204632777 -48623806 + AluSg SINE Alu 1 149 -161 524 73 73 57 chr2 204632881 204633004 -48623579 - AluSg/x SINE Alu -121 191 67 1205 153 0 79 chr2 204633004 204633220 -48623363 - AluSx SINE Alu -113 199 1 1685 182 10 27 chr2 204634071 204634367 -48622216 + AluJo SINE Alu 3 293 -19 189 0 0 0 chr2 204635229 204635250 -48621333 + (TG)n Simple_repeat Simple_repeat 1 21 0 342 143 0 0 chr2 204635266 204635315 -48621268 - Alu SINE Alu -251 52 4 21 0 0 0 chr2 204635342 204635363 -48621220 + AT_rich Low_complexity Low_complexity 1 21 0 2151 121 0 3 chr2 204635796 204636093 -48620490 + AluSx SINE Alu 7 302 -10 367 310 8 47 chr2 204636098 204636227 -48620356 - MER5A DNA MER1_type -59 130 7 223 175 0 0 chr2 204636334 204636374 -48620209 - L2 LINE L2 0 3313 3274 21 57 0 0 chr2 204636873 204636908 -48619675 + AT_rich Low_complexity Low_complexity 1 35 0 1370 279 45 47 chr2 204638667 204639264 -48617319 + L2 LINE L2 2718 3311 -2 2940 221 123 24 chr2 204639267 204640132 -48616451 + LTR28 LTR ERV1 1 950 -70 1197 264 112 43 chr2 204641363 204641828 -48614755 - L2 LINE L2 -4 3309 2813 543 271 21 21 chr2 204641840 204642028 -48614555 - MIR SINE MIR 0 262 75 1307 232 14 4 chr2 204642028 204642308 -48614275 + Tigger7 DNA MER2_type 1 283 -2204 * 1679 87 20 124 chr2 204642302 204642649 -48613934 + Tigger7 DNA MER2_type 2277 2587 0 182 216 78 0 chr2 204642661 204642712 -48613871 - MIR SINE MIR -207 55 1 456 278 0 8 chr2 204642725 204642851 -48613732 - L2 LINE L2 -544 2770 2646 1566 136 56 75 chr2 204643306 204643681 -48612902 + THE1C LTR MaLR 8 375 0 430 284 129 21 chr2 204643781 204643975 -48612608 + MIR SINE MIR 33 246 -16 2213 87 9 40 chr2 204643999 204644322 -48612261 + AluSq SINE Alu 1 313 0 22 80 0 0 chr2 204644417 204644467 -48612116 + AT_rich Low_complexity Low_complexity 1 50 0 2164 114 0 0 chr2 204644874 204645185 -48611398 + AluSc SINE Alu 1 311 0 1794 150 14 20 chr2 204645527 204645821 -48610762 + AluJo SINE Alu 1 292 -20 3629 127 10 2 chr2 204645830 204646413 -48610170 + L1PA13 LINE L1 5572 6159 -4 319 227 62 11 chr2 204646605 204646710 -48609873 - MER20B DNA MER1_type -17 202 89 567 0 0 0 chr2 204648025 204648088 -48608495 + (CA)n Simple_repeat Simple_repeat 2 64 0 341 279 30 42 chr2 204648916 204649081 -48607502 - MIR SINE MIR 0 262 100 1559 174 49 26 chr2 204649255 204649559 -48607024 + AluJo SINE Alu 1 311 -1 450 287 53 43 chr2 204650347 204650535 -48606048 - L2 LINE L2 -31 3282 3093 373 293 130 54 chr2 204651467 204651706 -48604877 - MIR SINE MIR -1 261 5 282 285 81 59 chr2 204651731 204651917 -48604666 - MIR SINE MIR -23 239 50 384 328 8 8 chr2 204652920 204653048 -48603535 - MER5A DNA MER1_type -1 188 61 3604 99 4 0 chr2 204653051 204653561 -48603022 - L1MA3 LINE L1 0 7724 7210 324 48 0 0 chr2 204653561 204653603 -48602980 + (TG)n Simple_repeat Simple_repeat 1 42 0 3604 99 4 0 chr2 204653603 204653615 -48602968 - L1MA3 LINE L1 -514 7210 7200 251 118 0 53 chr2 204653615 204653691 -48602892 + (TA)n Simple_repeat Simple_repeat 2 73 0 2141 107 79 0 chr2 204653697 204654052 -48602531 - L1MA3 LINE L1 -514 7210 6828 * 17246 134 18 4 chr2 204654045 204655049 -48601534 - L1MA3 LINE L1 -4774 2791 1802 360 0 0 0 chr2 204655049 204655089 -48601494 + (TC)n Simple_repeat Simple_repeat 1 40 0 17246 134 18 4 chr2 204655089 204656823 -48599760 - L1MA3 LINE L1 -5763 1802 16 205 292 0 31 chr2 204656824 204656889 -48599694 - MER5A DNA MER1_type -114 75 13 916 213 64 8 chr2 204657181 204657416 -48599167 + MER5C DNA MER1_type 1 248 -76 362 316 70 0 chr2 204658592 204658750 -48597833 + MIR SINE MIR 73 241 -21 2318 16 0 0 chr2 204659495 204659774 -48596809 + AluYa5 SINE Alu 39 317 0 665 251 127 14 chr2 204659830 204660184 -48596399 + L1ME4a LINE L1 5728 6121 0 2313 97 10 3 chr2 204660587 204660895 -48595688 + AluSg SINE Alu 1 310 0 2090 113 0 23 chr2 204662055 204662356 -48594227 + AluSg SINE Alu 1 294 -16 2280 92 7 3 chr2 204662357 204662649 -48593934 + AluSq SINE Alu 1 293 -20 2599 90 31 6 chr2 204663040 204663395 -48593188 - THE1B LTR MaLR 0 364 1 370 342 8 0 chr2 204663818 204663935 -48592648 + MIR SINE MIR 3 120 -142 318 263 191 26 chr2 204663988 204664140 -48592443 + L1MC4a LINE L1 5950 6126 -1682 343 279 16 36 chr2 204664256 204664507 -48592076 + L1MC5 LINE L1 6957 7202 -759 240 236 55 55 chr2 204664648 204664830 -48591753 + L1MC5 LINE L1 7261 7442 -519 559 281 122 9 chr2 204664878 204665099 -48591484 + L1ME3 LINE L1 5875 6120 -42 2616 59 0 0 chr2 204665110 204665416 -48591167 + AluY SINE Alu 1 306 -5 294 262 12 0 chr2 204665471 204665555 -48591028 + L1ME3 LINE L1 5935 6019 -143 2661 250 36 48 chr2 204665822 204666731 -48589852 - L1M4 LINE L1 -5633 909 12 551 231 77 63 chr2 204667593 204667879 -48588704 + L1MC4a LINE L1 5679 5968 -1840 310 239 9 9 chr2 204667880 204667989 -48588594 + (TA)n Simple_repeat Simple_repeat 1 109 0 260 369 144 26 chr2 204668662 204669462 -48587121 - L2 LINE L2 -605 2709 1816 323 234 362 0 chr2 204669581 204669722 -48586861 + MIR SINE MIR 1 192 -70 201 318 73 45 chr2 204669877 204669987 -48586596 - L2 LINE L2 0 3272 3160 1849 171 0 3 chr2 204670005 204670298 -48586285 + AluJb SINE Alu 1 292 -20 1933 162 16 10 chr2 204670610 204670918 -48585665 - AluJo SINE Alu -2 310 1 1776 126 60 23 chr2 204672070 204672371 -48584212 - AluJo SINE Alu 0 312 1 584 196 87 87 chr2 204672377 204672596 -48583987 + MER20 DNA MER1_type 1 219 0 2426 70 0 0 chr2 204672868 204673155 -48583428 - AluSg SINE Alu -23 287 1 452 120 0 0 chr2 204674469 204674544 -48582039 - Alu SINE Alu -3 309 235 750 230 162 68 chr2 204676210 204676580 -48580003 - L2 LINE L2 -21 3292 2888 1596 185 47 41 chr2 204677350 204677713 -48578870 + MLT1A1 LTR MaLR 1 365 0 227 200 0 0 chr2 204677776 204677826 -48578757 + (TA)n Simple_repeat Simple_repeat 2 51 0 1615 188 14 24 chr2 204678121 204678414 -48578169 + AluJo SINE Alu 1 290 -22 914 250 34 21 chr2 204678509 204678745 -48577838 - MIR SINE MIR -21 241 3 193 282 103 0 chr2 204680193 204680271 -48576312 - MIR SINE MIR -27 235 150 348 345 25 0 chr2 204680462 204680581 -48576002 - MIR SINE MIR -139 123 2 213 351 11 0 chr2 204680784 204680878 -48575705 + MIR SINE MIR 81 175 -87 885 270 147 45 chr2 204681233 204681703 -48574880 + LTR33 LTR ERVL 4 521 0 1632 228 29 7 chr2 204681948 204682365 -48574218 - MLT1C LTR MaLR 0 467 42 322 289 94 0 chr2 204682515 204682643 -48573940 - MER117 DNA MER1_type -47 150 11 22 35 0 0 chr2 204682751 204682780 -48573803 + AT_rich Low_complexity Low_complexity 1 29 0 7054 49 8 7 chr2 204683066 204684590 -48571993 + L1PA5 LINE L1 4626 6154 0 3947 161 24 33 chr2 204685010 204685096 -48571487 + L1MB3 LINE L1 4876 4961 -1222 2003 161 37 11 chr2 204685096 204685451 -48571132 - MLT1A1 LTR MaLR 0 365 2 3947 161 24 33 chr2 204685451 204686504 -48570079 + L1MB3 LINE L1 4961 6004 -179 2219 69 3 7 chr2 204687106 204687438 -48569145 + AluY SINE Alu 1 311 0 21 0 0 0 chr2 204687811 204687832 -48568751 + AT_rich Low_complexity Low_complexity 1 21 0 1005 138 26 48 chr2 204689093 204689282 -48567301 + AluJo SINE Alu 121 305 -7 25 0 0 0 chr2 204691153 204691178 -48565405 + AT_rich Low_complexity Low_complexity 1 25 0 657 315 61 8 chr2 204691304 204691666 -48564917 + L1MC4a LINE L1 5548 5928 -1880 2595 52 0 3 chr2 204692196 204692503 -48564080 + AluY SINE Alu 2 307 -4 2354 99 3 0 chr2 204693080 204693382 -48563201 - AluSx SINE Alu -9 303 1 2559 287 169 40 chr2 204694903 204695070 -48561513 + L2 LINE L2 876 1020 -2293 2435 67 3 22 chr2 204695070 204695406 -48561177 - AluY SINE Alu 0 330 1 2559 287 169 40 chr2 204695406 204697371 -48559212 + L2 LINE L2 1020 3310 -3 1154 162 121 97 chr2 204697485 204697775 -48558808 - AluJb SINE Alu -4 298 2 373 310 42 23 chr2 204697775 204697968 -48558615 - MIR3 SINE MIR -47 215 11 377 293 68 15 chr2 204698043 204698176 -48558407 + L2 LINE L2 3133 3272 0 278 385 75 6 chr2 204698544 204698718 -48557865 + MIR3 SINE MIR 20 205 -3 202 200 0 0 chr2 204698832 204698867 -48557716 + (TGAA)n Simple_repeat Simple_repeat 4 38 0 238 163 0 20 chr2 204699258 204699307 -48557276 - MER63 DNA MER1_type -33 1028 981 489 205 82 41 chr2 204699308 204699430 -48557153 - MER63 DNA MER1_type -309 753 1 397 326 77 6 chr2 204699494 204699675 -48556908 + MIR3 SINE MIR 15 208 0 1697 183 0 21 chr2 204701272 204701577 -48555006 - AluJo SINE Alu 0 301 3 2004 137 3 0 chr2 204702005 204702290 -48554293 + AluSx SINE Alu 3 288 -24 186 43 0 0 chr2 204702293 204702316 -48554267 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1402 138 132 72 chr2 204702390 204702738 -48553845 - MLT1B LTR MaLR 0 390 22 259 150 17 0 chr2 204703022 204703082 -48553501 + MER113 DNA MER1_type? 157 217 -304 180 183 73 122 chr2 204703191 204703273 -48553310 + L2 LINE L2 2574 2651 -663 1712 156 3 11 chr2 204703345 204703628 -48552955 + AluJo SINE Alu 1 281 -31 * 2159 120 3 0 chr2 204703627 204703919 -48552664 - AluSx SINE Alu -19 293 1 196 329 99 37 chr2 204705523 204705684 -48550899 - L2 LINE L2 -814 2500 2330 575 232 23 45 chr2 204705761 204705938 -48550645 + MER63A DNA MER1_type 28 200 -10 186 272 173 50 chr2 204706050 204706252 -48550331 - L2 LINE L2 -1235 2079 1853 243 390 0 8 chr2 204707329 204707452 -48549131 + MIR3 SINE MIR 82 203 -5 705 128 0 0 chr2 204707732 204707834 -48548749 - FLAM_A SINE Alu -21 121 20 2446 58 3 0 chr2 204708406 204708701 -48547882 - AluY SINE Alu -15 296 1 209 220 0 40 chr2 204709923 204709973 -48546610 + L2 LINE L2 3214 3261 -11 212 298 234 0 chr2 204710019 204710113 -48546470 - MIR SINE MIR -57 205 90 284 235 69 0 chr2 204711630 204711732 -48544851 + L1M4 LINE L1 2267 2375 -3771 283 303 23 51 chr2 204712567 204712742 -48543841 + MLT1I LTR MaLR 68 237 -172 495 235 29 7 chr2 204712803 204712939 -48543644 + MLT1I LTR MaLR 251 389 -20 21 0 0 0 chr2 204713015 204713036 -48543547 + AT_rich Low_complexity Low_complexity 1 21 0 25 75 0 0 chr2 204713433 204713486 -48543097 + AT_rich Low_complexity Low_complexity 1 53 0 450 276 123 15 chr2 204713487 204713690 -48542893 - MIR SINE MIR -25 237 13 1634 113 58 14 chr2 204713874 204713958 -48542625 - L1MA7 LINE L1 -407 5884 5805 279 0 0 0 chr2 204713958 204713989 -48542594 + (TG)n Simple_repeat Simple_repeat 2 32 0 1634 113 58 14 chr2 204713989 204714197 -48542386 - L1MA7 LINE L1 -486 5805 5579 14377 124 23 16 chr2 204714202 204716595 -48539988 + Tigger1 DNA MER2_type 10 2418 0 1637 96 4 8 chr2 204716595 204716856 -48539727 - L1MA7 LINE L1 -711 5580 5321 227 367 125 8 chr2 204716989 204717117 -48539466 + MIR3 SINE MIR 31 173 -35 350 154 92 0 chr2 204717304 204717369 -48539214 + MER5C DNA MER1_type 6 76 -248 192 214 95 0 chr2 204717485 204717527 -48539056 - MER5C DNA MER1_type -248 76 31 21 0 0 0 chr2 204717580 204717601 -48538982 + AT_rich Low_complexity Low_complexity 1 21 0 361 276 119 53 chr2 204719233 204719476 -48537107 - MLT1L LTR MaLR -174 441 183 247 376 66 12 chr2 204719792 204720201 -48536382 + L1MEc LINE L1 466 896 -5929 1066 283 38 51 chr2 204720564 204721359 -48535224 + L1MEc LINE L1 1042 1710 -4832 848 186 129 0 chr2 204722276 204722470 -48534113 - MER20 DNA MER1_type 0 219 1 1009 241 54 34 chr2 204724222 204724516 -48532067 + L2 LINE L2 3008 3307 -6 681 287 43 20 chr2 204725919 204726173 -48530410 + MIR SINE MIR 1 260 -2 2415 73 0 3 chr2 204726392 204726695 -48529888 + AluY SINE Alu 1 302 -9 190 264 135 54 chr2 204726730 204726878 -48529705 - L2 LINE L2 -2 3311 3152 200 194 0 0 chr2 204727022 204727058 -48529525 + T-rich Low_complexity Low_complexity 4 39 0 223 171 24 0 chr2 204727314 204727355 -48529228 - MIR SINE MIR -102 160 119 201 336 143 25 chr2 204727376 204727495 -48529088 - L2 LINE L2 -206 3066 2934 2259 115 0 0 chr2 204727602 204727897 -48528686 + AluSx SINE Alu 1 295 -17 971 176 81 11 chr2 204728522 204728795 -48527788 - MER33 DNA MER1_type 0 324 33 252 310 23 11 chr2 204729342 204729429 -48527154 + MIR SINE MIR 101 188 -74 244 48 48 0 chr2 204731628 204731670 -48524913 + (CA)n Simple_repeat Simple_repeat 2 45 0 21 0 0 0 chr2 204731704 204731725 -48524858 + AT_rich Low_complexity Low_complexity 1 21 0 812 230 86 19 chr2 204732678 204732991 -48523592 + L1ME4a LINE L1 5595 5928 -193 362 215 0 21 chr2 204733185 204733278 -48523305 - LTR67 LTR ERVL -10 547 457 1960 139 0 17 chr2 204734022 204734324 -48522259 + AluJb SINE Alu 3 299 -13 218 175 0 143 chr2 204734984 204735047 -48521536 - L2 LINE L2 -252 3061 3008 513 69 0 0 chr2 204735689 204735761 -48520822 - L1PA15 LINE L1 -4 6161 6090 1341 242 100 9 chr2 204736138 204736736 -48519847 + L2 LINE L2 2563 3212 -101 233 301 117 0 chr2 204737122 204737225 -48519358 - L2 LINE L2 -5 3308 3194 2070 121 0 10 chr2 204738048 204738346 -48518237 + AluSg SINE Alu 1 295 -15 262 244 8 126 chr2 204740710 204740762 -48515821 + MER5A DNA MER1_type 85 117 -72 2100 107 41 3 chr2 204740762 204741053 -48515530 - AluSq SINE Alu -11 302 1 262 244 8 126 chr2 204741053 204741119 -48515464 + MER5A DNA MER1_type 117 189 0 26 0 0 0 chr2 204741320 204741346 -48515237 + AT_rich Low_complexity Low_complexity 1 26 0 2401 79 10 0 chr2 204741426 204741729 -48514854 + AluSc SINE Alu 1 306 -3 2077 139 3 0 chr2 204741888 204742190 -48514393 + AluSx SINE Alu 1 303 -9 1072 167 91 49 chr2 204742376 204742663 -48513920 + MER33 DNA MER1_type 1 299 -25 654 132 0 0 chr2 204744274 204744388 -48512195 - AluSx SINE Alu 0 304 191 733 87 0 0 chr2 204744391 204744483 -48512100 - AluSx SINE Alu -174 139 48 541 265 116 54 chr2 204744541 204744964 -48511619 - L1ME4a LINE L1 -191 5930 5482 687 246 149 35 chr2 204744977 204745205 -48511378 + MIR SINE MIR 8 261 -1 2300 105 0 0 chr2 204745308 204745602 -48510981 - AluSc SINE Alu -15 294 1 333 358 0 16 chr2 204745667 204745790 -48510793 - L1M4 LINE L1 -1968 4178 4058 22 56 0 0 chr2 204746120 204746156 -48510427 + AT_rich Low_complexity Low_complexity 1 36 0 192 292 28 14 chr2 204746577 204746649 -48509934 - MIR SINE MIR 0 262 190 321 350 76 13 chr2 204747513 204747670 -48508913 - MIR3 SINE MIR -12 196 30 416 263 32 51 chr2 204747857 204748013 -48508570 + MIR3 SINE MIR 56 208 0 2016 149 0 3 chr2 204748258 204748547 -48508036 + AluJo SINE Alu 1 288 -24 282 73 0 0 chr2 204748699 204748740 -48507843 + (CA)n Simple_repeat Simple_repeat 1 41 0 2277 103 0 0 chr2 204748856 204749156 -48507427 + AluSc SINE Alu 1 300 -9 323 356 24 57 chr2 204749215 204749513 -48507070 - L2 LINE L2 -18 3295 3008 4024 174 3 11 chr2 204749706 204750434 -48506149 + MER72 LTR ERV1 1 722 0 1804 160 3 49 chr2 204750870 204751195 -48505388 - AluJb SINE Alu -2 310 1 207 204 0 0 chr2 204751425 204751479 -48505104 + GA-rich Low_complexity Low_complexity 4 57 0 1070 178 84 53 chr2 204751560 204751804 -48504779 + L1ME LINE L1 5428 5686 -478 1962 122 25 76 chr2 204751804 204752199 -48504384 - THE1C LTR MaLR 0 375 1 1070 178 84 53 chr2 204752199 204752274 -48504309 + L1ME LINE L1 5686 5757 -407 195 250 0 0 chr2 204752306 204752358 -48504225 + (TA)n Simple_repeat Simple_repeat 2 53 0 309 151 0 0 chr2 204753676 204753729 -48502854 + A-rich Low_complexity Low_complexity 1 53 0 2151 91 21 7 chr2 204755030 204755316 -48501267 + AluSg SINE Alu 1 290 -20 232 255 0 0 chr2 204757629 204757676 -48498907 + polypurine Low_complexity Low_complexity 3 49 0 2003 117 67 0 chr2 204758282 204758564 -48498019 - AluSx SINE Alu -11 301 1 203 287 42 98 chr2 204758730 204758873 -48497710 + MER5A DNA MER1_type 32 166 -23 * 540 230 10 0 chr2 204758798 204758898 -48497685 - MER5A DNA MER1_type -80 109 9 420 20 0 0 chr2 204759371 204759420 -48497163 + (TG)n Simple_repeat Simple_repeat 2 50 0 28 29 0 0 chr2 204759792 204759827 -48496756 + AT_rich Low_complexity Low_complexity 1 35 0 383 187 13 13 chr2 204760500 204760575 -48496008 + Alu SINE Alu 218 292 -8 345 248 23 31 chr2 204761236 204761365 -48495218 + L1ME LINE L1 5423 5550 -614 4855 126 6 1 chr2 204761482 204762259 -48494324 + L1PA15 LINE L1 5385 6165 0 1979 106 36 26 chr2 204762471 204762773 -48493810 + AluSx SINE Alu 1 305 -7 305 70 88 0 chr2 204762929 204762986 -48493597 + Alu SINE Alu 241 302 0 2223 125 3 0 chr2 204763091 204763403 -48493180 - AluSq SINE Alu 0 313 1 23 0 0 0 chr2 204763841 204763864 -48492719 + AT_rich Low_complexity Low_complexity 1 23 0 181 291 0 17 chr2 204765813 204765930 -48490653 + GA-rich Low_complexity Low_complexity 1 115 0 1003 308 25 54 chr2 204765931 204766337 -48490246 - MLT1K LTR MaLR -78 510 117 665 232 94 58 chr2 204766537 204766644 -48489939 + MIR SINE MIR 29 131 -131 2137 131 3 0 chr2 204766644 204766941 -48489642 + AluSx SINE Alu 1 298 -14 665 232 94 58 chr2 204766941 204767057 -48489526 + MIR SINE MIR 131 260 -2 903 161 0 0 chr2 204767311 204767454 -48489129 + FLAM_C SINE Alu 1 143 0 844 170 7 7 chr2 204767471 204767606 -48488977 + FRAM SINE Alu 1 127 -49 2356 104 0 16 chr2 204768252 204768569 -48488014 + AluSx SINE Alu 1 312 0 181 333 43 21 chr2 204768700 204768793 -48487790 - L2 LINE L2 -219 3053 2959 368 285 72 26 chr2 204770857 204771050 -48485533 + MLT1K LTR MaLR 59 260 -328 3094 273 65 10 chr2 204772469 204773357 -48483226 - MER45C DNA AcHobo 0 953 17 180 0 0 0 chr2 204773575 204773595 -48482988 + (A)n Simple_repeat Simple_repeat 1 20 0 248 356 40 77 chr2 204773721 204773968 -48482615 - L2 LINE L2 0 3272 3035 880 206 58 22 chr2 204774068 204774344 -48482239 + L1MC5 LINE L1 7268 7553 -408 469 302 68 32 chr2 204774472 204774724 -48481859 + MIR SINE MIR 2 262 0 1155 163 154 31 chr2 204775814 204776139 -48480444 - MLT1A1 LTR MaLR 0 365 1 240 204 0 0 chr2 204776359 204776403 -48480180 + Alu SINE Alu 136 179 -120 1577 146 0 55 chr2 204777371 204777646 -48478937 + AluJo SINE Alu 40 299 -13 911 187 6 0 chr2 204777646 204777812 -48478771 + AluJb SINE Alu 134 300 -12 379 262 109 92 chr2 204778963 204779110 -48477473 + L1ME4a LINE L1 5808 5951 -170 234 0 0 0 chr2 204779110 204779136 -48477447 + (CA)n Simple_repeat Simple_repeat 2 27 0 379 262 109 92 chr2 204779136 204779282 -48477301 + L1ME4a LINE L1 5951 6106 -15 286 267 9 38 chr2 204779289 204779394 -48477189 + MIR SINE MIR 151 252 -10 2749 209 15 21 chr2 204780953 204781609 -48474974 + L1MB7 LINE L1 5522 6173 -11 783 116 0 65 chr2 204781699 204781837 -48474746 + AluJb SINE Alu 4 132 -180 342 0 0 0 chr2 204781849 204781887 -48474696 + (CA)n Simple_repeat Simple_repeat 2 39 0 411 260 17 0 chr2 204781909 204782086 -48474497 + (TA)n Simple_repeat Simple_repeat 1 180 0 1574 186 11 14 chr2 204783566 204783846 -48472737 + AluJo SINE Alu 1 279 -33 190 389 128 27 chr2 204784389 204784718 -48471865 - L2 LINE L2 -107 3165 2804 2271 99 3 0 chr2 204785549 204785841 -48470742 - AluSg SINE Alu -13 297 5 235 288 24 80 chr2 204785998 204786123 -48470460 - L2 LINE L2 -223 3049 2932 356 272 203 6 chr2 204786130 204786288 -48470295 + MIR SINE MIR 40 228 -34 223 253 58 46 chr2 204786416 204786503 -48470080 - L2 LINE L2 -529 2785 2698 231 125 0 0 chr2 204786681 204786721 -48469862 + (TG)n Simple_repeat Simple_repeat 1 40 0 236 167 0 19 chr2 204786879 204786933 -48469650 + (TA)n Simple_repeat Simple_repeat 2 54 0 406 309 55 70 chr2 204787362 204787563 -48469020 - L2 LINE L2 0 3272 3075 3608 135 68 5 chr2 204787993 204788607 -48467976 + MER39B LTR ERV1 1 653 0 322 298 37 29 chr2 204788678 204788920 -48467663 - L1ME4a LINE L1 -215 5906 5663 1394 191 61 155 chr2 204788937 204789703 -48466880 + LTR8A LTR ERV1 34 727 0 631 168 136 16 chr2 204790584 204790745 -48465838 + MER5A DNA MER1_type 4 186 -3 386 221 19 95 chr2 204791199 204791357 -48465226 - Charlie8 DNA MER1_type -2160 257 112 2239 98 0 0 chr2 204792054 204792365 -48464218 - AluY SINE Alu 0 311 1 3668 185 62 19 chr2 204792508 204792589 -48463994 - L1MB7 LINE L1 -1 6681 6605 2103 149 3 0 chr2 204792589 204792897 -48463686 - AluSx SINE Alu -3 309 1 3668 185 62 19 chr2 204792897 204793776 -48462807 - L1MB7 LINE L1 -77 6605 5681 4279 237 63 29 chr2 204793877 204794081 -48462502 - L1MB7 LINE L1 -3645 2999 2803 1982 163 7 56 chr2 204794081 204794491 -48462092 - MLT1B LTR MaLR 0 390 1 4279 237 63 29 chr2 204794491 204796596 -48459987 - L1MB7 LINE L1 -3841 2803 541 24 67 0 0 chr2 204796679 204796724 -48459859 + AT_rich Low_complexity Low_complexity 1 45 0 1673 190 15 45 chr2 204796727 204797195 -48459388 - Looper DNA T2_type -93 1465 1012 2497 172 37 2 chr2 204797210 204797722 -48458861 - L1MA9 LINE L1 0 6312 5783 1948 141 6 44 chr2 204797725 204798029 -48458554 - MER7A DNA MER2_type -2692 346 59 2393 146 50 29 chr2 204798029 204798446 -48458137 + MSTB LTR MaLR 1 426 0 1948 141 6 44 chr2 204798446 204798503 -48458080 - MER7A DNA MER2_type -2979 59 1 2513 160 31 0 chr2 204798515 204798970 -48457613 - L1MA9 LINE L1 -519 5793 5325 833 154 0 23 chr2 204798970 204799100 -48457483 - FRAM SINE Alu -5 171 45 3183 193 28 24 chr2 204799100 204799621 -48456962 - L1MA9 LINE L1 -1207 4939 4421 2205 128 3 0 chr2 204799621 204799927 -48456656 - AluSx SINE Alu -5 307 1 3183 193 28 24 chr2 204799927 204800049 -48456534 - L1MA9 LINE L1 -1725 4421 4301 693 234 0 0 chr2 204800049 204800173 -48456410 - FLAM_A SINE Alu -9 124 1 3183 193 28 24 chr2 204800173 204800328 -48456255 - L1MA9 LINE L1 -1845 4301 4137 1527 211 24 76 chr2 204800334 204800885 -48455698 - L1MB7 LINE L1 -6005 537 16 226 175 0 0 chr2 204801103 204801143 -48455440 - MLT1A1 LTR MaLR -1 364 325 21 57 0 0 chr2 204801279 204801314 -48455269 + AT_rich Low_complexity Low_complexity 1 35 0 303 71 0 0 chr2 204802206 204802248 -48454335 + (CATA)n Simple_repeat Simple_repeat 1 42 0 1239 181 138 11 chr2 204803137 204803397 -48453186 - AluSx SINE Alu -9 293 1 563 186 211 6 chr2 204804690 204804846 -48451737 - MER115 DNA AcHobo 0 693 506 924 305 118 8 chr2 204804876 204805266 -48451317 - MER115 DNA AcHobo -260 433 1 2368 90 3 0 chr2 204805861 204806161 -48450422 + AluSq SINE Alu 2 302 -11 339 300 33 27 chr2 204806638 204806788 -48449795 - MIR SINE MIR -34 228 78 369 303 121 46 chr2 204807044 204807103 -48449480 + L1M4 LINE L1 3111 3164 -2982 2239 128 0 3 chr2 204807103 204807416 -48449167 + AluSx SINE Alu 1 312 0 369 303 121 46 chr2 204807416 204807637 -48448946 + L1M4 LINE L1 3164 3412 -2734 537 300 121 0 chr2 204807638 204807878 -48448705 - L2 LINE L2 0 3313 3045 391 204 38 102 chr2 204808180 204808337 -48448246 - MER6 DNA MER2_type 0 865 -2 350 196 143 54 chr2 204808426 204808594 -48447989 + MER113 DNA MER1_type? 9 191 -330 186 243 0 0 chr2 204808679 204808716 -48447867 - MER5C DNA MER1_type -287 37 1 207 333 6 38 chr2 204808939 204809098 -48447485 + (CATATA)n Simple_repeat Simple_repeat 3 156 0 1215 165 23 18 chr2 204809231 204809449 -48447134 + MER20 DNA MER1_type 1 219 0 1428 77 0 0 chr2 204810716 204810886 -48445697 + AluY SINE Alu 84 253 -58 2213 199 11 81 chr2 204810974 204811503 -48445080 - MER21B LTR ERV1 -371 492 1 2763 147 47 19 chr2 204811591 204812395 -48444188 - MER21B-int LTR ERV1 -57 4134 3249 1332 171 0 0 chr2 204812814 204813025 -48443558 - AluSg/x SINE Alu -14 296 86 331 328 101 25 chr2 204813307 204813505 -48443078 - L2 LINE L2 -1 3312 3100 252 264 65 93 chr2 204813877 204814123 -48442460 - MER102a DNA MER1_type 0 330 92 1502 199 45 14 chr2 204814244 204814531 -48442052 - AluJo SINE Alu -16 296 1 2220 111 0 7 chr2 204814540 204814838 -48441745 - AluSx SINE Alu -16 296 1 1735 136 8 4 chr2 204815109 204815367 -48441216 + AluJb SINE Alu 35 293 -19 596 182 25 0 chr2 204815616 204815737 -48440846 + MER5C DNA MER1_type 1 124 -200 3906 183 97 22 chr2 204815744 204817293 -48439290 + MER52A LTR ERV1 1 1755 0 1861 138 0 44 chr2 204817685 204818006 -48438577 + AluSx SINE Alu 1 308 0 428 196 217 35 chr2 204818346 204818489 -48438094 + MER5C DNA MER1_type 133 301 -23 231 189 19 0 chr2 204818588 204818641 -48437942 - MER113 DNA MER1_type? -57 464 411 810 241 105 3 chr2 204819319 204819613 -48436970 - MER113 DNA MER1_type? -154 367 44 21 0 0 0 chr2 204820050 204820071 -48436512 + AT_rich Low_complexity Low_complexity 1 21 0 2424 92 3 0 chr2 204820217 204820522 -48436061 + AluSx SINE Alu 1 306 -6 424 325 18 12 chr2 204820924 204821087 -48435496 - MIR SINE MIR -49 213 50 207 0 0 0 chr2 204821213 204821236 -48435347 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 906 193 94 4 chr2 204821888 204822121 -48434462 + L1MD3 LINE L1 7729 7982 -13 393 276 47 53 chr2 204822896 204823066 -48433517 - MIR SINE MIR -63 199 31 297 75 0 0 chr2 204823126 204823166 -48433417 + (A)n Simple_repeat Simple_repeat 1 40 0 329 91 0 18 chr2 204823294 204823349 -48433234 + (TTTTA)n Simple_repeat Simple_repeat 1 54 0 40584 34 24 1 chr2 204823349 204829341 -48427242 - L1PA2 LINE L1 -24 6131 5 23 78 0 0 chr2 204831183 204831234 -48425349 + AT_rich Low_complexity Low_complexity 1 51 0 318 261 78 70 chr2 204831244 204831386 -48425197 + MIR SINE MIR 56 198 -64 524 225 102 81 chr2 204831814 204832099 -48424484 + MER102b DNA MER1_type 48 338 -3 357 305 117 30 chr2 204832262 204832459 -48424124 + L2 LINE L2 2584 2797 -517 249 224 0 0 chr2 204832622 204832680 -48423903 + MLT1J LTR MaLR 409 466 -45 206 287 224 14 chr2 204832740 204832883 -48423700 + L2 LINE L2 2897 3069 -203 368 239 22 65 chr2 204833011 204833189 -48423394 + MLT1J LTR MaLR 279 461 0 2099 127 0 19 chr2 204833216 204833523 -48423060 + AluSg SINE Alu 1 301 -9 460 372 29 61 chr2 204833538 204833882 -48422701 + L2 LINE L2 2910 3242 -30 4604 57 0 3 chr2 204833902 204834479 -48422104 + L1PA7 LINE L1 5576 6150 -4 22 35 0 0 chr2 204834496 204834525 -48422058 + AT_rich Low_complexity Low_complexity 1 29 0 253 362 50 14 chr2 204834525 204834666 -48421917 - L3 LINE CR1 -1066 511 366 203 317 83 33 chr2 204835055 204835175 -48421408 + L3 LINE CR1 1441 1566 -11 3213 100 126 0 chr2 204839419 204839911 -48416672 + MER41C LTR ERV1 1 554 0 315 264 9 38 chr2 204840091 204840197 -48416386 - MER5A DNA MER1_type 0 189 87 285 271 80 10 chr2 204840961 204841083 -48415500 + MIR SINE MIR 14 147 -61 2296 96 0 10 chr2 204841191 204841504 -48415079 + AluY SINE Alu 1 310 -1 25 31 0 0 chr2 204842053 204842085 -48414498 + AT_rich Low_complexity Low_complexity 1 32 0 1724 161 32 26 chr2 204842267 204842577 -48414006 - AluJo SINE Alu 0 312 1 202 177 16 48 chr2 204843097 204843159 -48413424 + (TATAA)n Simple_repeat Simple_repeat 1 60 0 2410 85 0 7 chr2 204843823 204844129 -48412454 + AluSg SINE Alu 2 305 -5 249 268 0 0 chr2 204844267 204844338 -48412245 + L1ME4a LINE L1 5806 5876 -245 180 182 0 0 chr2 204844589 204844633 -48411950 + (TA)n Simple_repeat Simple_repeat 2 45 0 294 149 41 8 chr2 204844712 204844833 -48411750 + (TA)n Simple_repeat Simple_repeat 2 126 0 308 220 85 17 chr2 204844905 204845023 -48411560 + L1ME4a LINE L1 5992 6117 -4 26 0 0 0 chr2 204845118 204845144 -48411439 + AT_rich Low_complexity Low_complexity 1 26 0 2338 100 0 3 chr2 204845443 204845752 -48410831 - AluSg SINE Alu -2 308 1 230 204 143 0 chr2 204848198 204848247 -48408336 + L2 LINE L2 3213 3268 -4 282 240 133 0 chr2 204849554 204849629 -48406954 - MLT1J LTR MaLR -194 317 233 2181 123 7 7 chr2 204849888 204850198 -48406385 + AluSx SINE Alu 1 310 -2 1992 135 2 69 chr2 204850492 204850899 -48405684 - MLT1B LTR MaLR -4 386 7 263 337 53 12 chr2 204850977 204851146 -48405437 - L1ME3A LINE L1 -7 6163 5988 233 244 67 11 chr2 204851249 204851339 -48405244 - L1ME3A LINE L1 -231 5939 5845 299 314 97 16 chr2 204852374 204852632 -48403951 - L1ME4a LINE L1 -73 6048 5770 398 266 53 30 chr2 204854166 204854335 -48402248 + L2 LINE L2 1242 1414 -1900 455 214 182 13 chr2 204855216 204855375 -48401208 - L2 LINE L2 0 3313 3128 2354 28 43 0 chr2 204855897 204856179 -48400404 + AluY SINE Alu 1 294 -17 1728 161 25 36 chr2 204856990 204857351 -48399232 - MLT1A1 LTR MaLR -8 357 1 363 266 23 115 chr2 204857547 204857765 -48398818 + L2 LINE L2 2694 2891 -423 2415 126 56 2 chr2 204857986 204858415 -48398168 - L1MA9 LINE L1 0 6312 5861 376 327 83 19 chr2 204858559 204858764 -48397819 + L1ME4a LINE L1 5045 5262 -884 2276 101 3 0 chr2 204858953 204859249 -48397334 + AluSq SINE Alu 1 297 -16 318 274 94 0 chr2 204859286 204859392 -48397191 + L1ME4a LINE L1 5523 5638 -483 302 251 242 3 chr2 204859411 204859758 -48396825 + L1ME4a LINE L1 5691 6120 -1 317 242 0 124 chr2 204859774 204859927 -48396656 - MIR SINE MIR 0 262 129 596 297 54 13 chr2 204860775 204861014 -48395569 - MIR SINE MIR -12 250 2 510 240 200 0 chr2 204861852 204862002 -48394581 - MER5A DNA MER1_type 0 189 10 2226 83 0 4 chr2 204862010 204862286 -48394297 - AluSq SINE Alu -38 275 1 4100 149 31 46 chr2 204862563 204863556 -48393027 + MER11C LTR ERVK 1 1067 -4 726 355 70 21 chr2 204863660 204864046 -48392537 + L3 LINE CR1 195 599 -978 1718 159 36 0 chr2 204864600 204864877 -48391706 + AluJb SINE Alu 1 287 -25 2211 119 0 10 chr2 204865122 204865432 -48391151 + AluSx SINE Alu 1 307 -5 1451 247 105 24 chr2 204865438 204866162 -48390421 + L1MC4 LINE L1 6893 7675 -367 346 299 109 0 chr2 204866277 204866414 -48390169 + L1MC4 LINE L1 7802 7953 -89 22 35 0 0 chr2 204866679 204866708 -48389875 + AT_rich Low_complexity Low_complexity 1 29 0 510 235 43 37 chr2 204868314 204868361 -48388222 - MIR SINE MIR -2 260 215 1718 115 0 76 chr2 204868361 204868649 -48387934 - AluSq SINE Alu -5 308 43 510 235 43 37 chr2 204868649 204868763 -48387820 - MIR SINE MIR -47 215 98 423 287 81 23 chr2 204868764 204868938 -48387645 + MLT1J LTR MaLR 3 186 -325 25 31 0 0 chr2 204869835 204869867 -48386716 + AT_rich Low_complexity Low_complexity 1 32 0 369 145 14 14 chr2 204870316 204870385 -48386198 + Tigger5 DNA MER2_type 2255 2323 0 1028 216 14 10 chr2 204870385 204870593 -48385990 + Tigger5 DNA MER2_type 13 221 -2102 1577 147 27 14 chr2 204870599 204870891 -48385692 + Tigger5 DNA MER2_type 1844 2139 -184 1743 165 3 18 chr2 204870893 204871178 -48385405 + AluJo SINE Alu 1 281 -31 339 44 0 0 chr2 204871178 204871223 -48385360 + (CTAAA)n Simple_repeat Simple_repeat 1 45 0 308 213 41 41 chr2 204871566 204871652 -48384931 + MIR SINE MIR 67 151 -63 976 193 6 0 chr2 204871719 204871885 -48384698 + FAM SINE Alu 2 168 -7 231 345 12 0 chr2 204871995 204872079 -48384504 + MIR3 SINE MIR 98 182 -26 646 260 60 60 chr2 204872207 204872274 -48384309 + MER102b DNA MER1_type 33 99 -1329 2162 54 0 11 chr2 204872274 204872551 -48384032 + L1PA6 LINE L1 5879 6152 -2 646 260 60 60 chr2 204872551 204872783 -48383800 + MER102b DNA MER1_type 98 332 -9 1955 142 30 0 chr2 204873263 204873559 -48383024 + AluSq SINE Alu 1 305 -8 1658 120 11 0 chr2 204873619 204873886 -48382697 + L1MB2 LINE L1 5644 5913 -258 4471 85 46 3 chr2 204923886 204924533 -48332050 + L1PA13 LINE L1 5489 6163 0 394 202 184 9 chr2 204924533 204924642 -48331941 + Tigger3(Golem) DNA MER2_type 2901 3028 -1 439 188 60 0 chr2 204924716 204924833 -48331750 + L1M4 LINE L1 4639 4762 -1384 293 308 38 0 chr2 204925052 204925211 -48331372 + L1M4c LINE L1 1406 1570 -4814 6043 153 26 18 chr2 204925451 204926790 -48329793 - L1P4 LINE L1 -599 5564 4221 7249 33 1 1 chr2 204926790 204927717 -48328866 - L1P LINE L1 -777 5369 4443 4544 135 3 4 chr2 204927818 204928575 -48328008 + L1P LINE L1 3468 4223 -1923 3008 22 0 19 chr2 204928816 204929177 -48327406 - L1PA3 LINE L1 -3 6152 5799 5326 52 7 3 chr2 204929177 204929904 -48326679 + L1P LINE L1 3867 4596 -1550 218 362 13 54 chr2 204930088 204930237 -48326346 - L2 LINE L2 -263 3009 2867 258 348 54 0 chr2 204930298 204930390 -48326193 + L3 LINE CR1 1462 1558 -19 21 0 0 0 chr2 204930512 204930533 -48326050 + AT_rich Low_complexity Low_complexity 1 21 0 363 206 20 39 chr2 204930579 204930681 -48325902 - L3b LINE CR1 -382 1201 1102 293 263 83 45 chr2 204931117 204931273 -48325310 + L2 LINE L2 3150 3311 -2 4215 173 24 7 chr2 204931413 204931528 -48325055 - L1P LINE L1 -2994 3152 3040 2820 10 3 0 chr2 204931528 204931839 -48324744 - AluYb8 SINE Alu -6 312 1 4215 173 24 7 chr2 204931839 204932594 -48323989 - L1P LINE L1 -3106 3040 2267 331 218 0 0 chr2 204932634 204932689 -48323894 - Tigger3(Golem) DNA MER2_type -2970 59 5 2229 234 54 25 chr2 204932696 204933458 -48323125 - L1M4 LINE L1 -1621 4525 3738 2341 96 3 0 chr2 204933458 204933761 -48322822 - AluSp SINE Alu -9 304 1 2229 234 54 25 chr2 204933761 204933789 -48322794 - L1M4 LINE L1 -2408 3738 3712 2695 176 24 44 chr2 204934351 204934737 -48321846 + L1MA9 LINE L1 5691 6083 -229 2328 112 99 8 chr2 204934737 204935129 -48321454 - MSTA LTR MaLR 0 428 1 2695 176 24 44 chr2 204935129 204935213 -48321370 + L1MA9 LINE L1 6083 6167 -145 2250 70 0 11 chr2 204935213 204935526 -48321057 + AluY SINE Alu 1 310 0 2695 176 24 44 chr2 204935526 204935688 -48320895 + L1MA9 LINE L1 6167 6312 0 428 240 0 0 chr2 204935800 204935896 -48320687 - MER94 DNA DNA -2 132 37 3261 236 75 21 chr2 204935898 204936123 -48320460 + L1M4 LINE L1 3125 3336 -2810 2312 166 66 69 chr2 204936123 204936320 -48320263 + MER6A DNA MER2_type 1 197 -668 264 100 0 0 chr2 204936320 204936360 -48320223 + (TG)n Simple_repeat Simple_repeat 1 40 0 2312 166 66 69 chr2 204936360 204936540 -48320043 + MER6A DNA MER2_type 197 376 -489 2131 115 7 0 chr2 204936540 204936836 -48319747 - AluSx SINE Alu -14 298 1 2312 166 66 69 chr2 204936836 204937064 -48319519 + MER6A DNA MER2_type 376 605 0 3261 236 75 21 chr2 204937064 204937404 -48319179 + L1M4 LINE L1 3336 3656 -2490 1944 167 3 0 chr2 204937404 204937704 -48318879 + AluSx SINE Alu 1 301 -11 3261 236 75 21 chr2 204937704 204938476 -48318107 + L1M4 LINE L1 3656 4536 -1610 35634 84 22 9 chr2 204938772 204944118 -48312465 + L1P LINE L1 11 5422 -732 1293 174 76 31 chr2 204946128 204946416 -48310167 + AluJb SINE Alu 1 301 -11 530 281 91 10 chr2 204948859 204949058 -48307525 + MIR SINE MIR 18 232 -30 218 295 11 32 chr2 204949560 204949655 -48306928 - MIR SINE MIR -2 260 168 2460 88 0 0 chr2 204949769 204950076 -48306507 - AluY SINE Alu -4 307 1 2210 107 7 0 chr2 204950379 204950677 -48305906 - AluSx SINE Alu -12 300 1 1939 130 23 3 chr2 204950856 204951155 -48305428 + AluSx SINE Alu 1 305 -7 1180 156 27 146 chr2 204951466 204951876 -48304707 + MLT1A1 LTR MaLR 3 363 -2 2117 118 139 18 chr2 204952028 204952410 -48304173 + MSTA LTR MaLR 1 428 0 416 320 59 53 chr2 204953143 204953518 -48303065 - MER110-int LTR ERV1 -2254 2393 2017 2856 88 25 0 chr2 204953641 204954038 -48302545 - L1PA11 LINE L1 -1 7611 7205 19796 167 49 50 chr2 204954180 204954543 -48302040 - L1PA11 LINE L1 -413 7199 6837 2170 59 0 7 chr2 204954543 204954813 -48301770 - AluY SINE Alu -5 306 39 19796 167 49 50 chr2 204954813 204958054 -48298529 - L1PA11 LINE L1 -775 6837 3594 1675 110 0 31 chr2 204958054 204958308 -48298275 - AluSg/x SINE Alu -1 311 66 19796 167 49 50 chr2 204958308 204958727 -48297856 - L1PA11 LINE L1 -4018 3594 3176 797 75 90 45 chr2 204958727 204958860 -48297723 + MER85 DNA T2_type 1 139 0 19796 167 49 50 chr2 204958860 204960618 -48295965 - L1PA11 LINE L1 -4436 3176 76 1773 79 128 4 chr2 204961363 204961628 -48294955 + AluY SINE Alu 1 298 -3 464 291 143 10 chr2 204961882 204962078 -48294505 + MIR SINE MIR 25 246 -16 250 174 185 22 chr2 204962685 204962777 -48293806 + MIR SINE MIR 14 120 -142 274 333 59 10 chr2 204962893 204962995 -48293588 + L2 LINE L2 3162 3268 -4 28 61 0 0 chr2 204963464 204963513 -48293070 + AT_rich Low_complexity Low_complexity 1 49 0 1823 45 0 0 chr2 204964492 204964715 -48291868 - L1PA4 LINE L1 -2 6153 5931 1921 169 0 3 chr2 204965325 204965620 -48290963 - AluJb SINE Alu -18 294 1 330 194 16 0 chr2 204967470 204967532 -48289051 + MER5B DNA MER1_type 1 63 -115 1666 155 7 62 chr2 204967750 204968059 -48288524 + AluJo SINE Alu 1 292 -20 245 254 0 17 chr2 204968068 204968127 -48288456 + MER5B DNA MER1_type 51 108 -70 306 0 0 0 chr2 204968144 204968178 -48288405 + (TG)n Simple_repeat Simple_repeat 1 34 0 1326 188 4 48 chr2 204968178 204968450 -48288133 - AluJb SINE Alu -31 281 22 350 185 0 15 chr2 204968450 204968515 -48288068 + MER5B DNA MER1_type 114 177 -1 1205 212 50 53 chr2 204968558 204968954 -48287629 - MSTD LTR MaLR -1 395 1 229 333 24 0 chr2 204969233 204969317 -48287266 + MIR SINE MIR 82 167 -95 560 262 64 39 chr2 204970049 204970345 -48286238 - L1M3 LINE L1 -334 5849 5551 4938 60 3 5 chr2 204970356 204970995 -48285588 - L1PA6 LINE L1 -5 6149 5512 253 277 0 15 chr2 204971267 204971332 -48285251 + GA-rich Low_complexity Low_complexity 3 66 0 28 71 0 0 chr2 204973233 204973289 -48283294 + AT_rich Low_complexity Low_complexity 1 56 0 866 280 119 49 chr2 204973423 204973919 -48282664 + L2 LINE L2 2789 3313 0 197 283 11 98 chr2 204973960 204974052 -48282531 - L2 LINE L2 -512 2802 2719 349 292 0 31 chr2 204974376 204974506 -48282077 - MER94 DNA DNA -8 126 1 2001 131 11 0 chr2 204974525 204974827 -48281756 + AluSx SINE Alu 1 305 0 595 227 8 0 chr2 204975743 204975875 -48280708 + MER94 DNA DNA 1 133 -1 22 0 0 0 chr2 204978499 204978521 -48278062 + GC_rich Low_complexity Low_complexity 1 22 0 352 287 142 69 chr2 204978528 204979022 -48277561 + L1M2 LINE L1 535 1064 -5785 533 269 188 40 chr2 204979830 204980309 -48276274 + MLT1K LTR MaLR 33 582 -6 1448 167 82 27 chr2 204980544 204980643 -48275940 + AluJo SINE Alu 1 93 -219 1999 63 0 42 chr2 204980643 204980930 -48275653 + L1PA7 LINE L1 5880 6154 0 1448 167 82 27 chr2 204980930 204981123 -48275460 + AluJo SINE Alu 93 309 -3 244 238 24 0 chr2 204981139 204981223 -48275360 + GA-rich Low_complexity Low_complexity 2 87 0 373 346 31 24 chr2 204981473 204981831 -48274752 - L3 LINE CR1 -75 1502 1073 930 278 128 26 chr2 204981857 204981960 -48274623 + MER69 DNA AcHobo 59 150 -1076 1350 174 112 38 chr2 204981960 204982299 -48274284 + MLT1A1 LTR MaLR 1 364 -1 930 278 128 26 chr2 204982299 204982662 -48273921 + MER69 DNA AcHobo 150 573 -653 * 1322 200 24 3 chr2 204982659 204982989 -48273594 + MER69 DNA AcHobo 2012 2348 -178 227 31 31 0 chr2 204983003 204983035 -48273548 + (TTG)n Simple_repeat Simple_repeat 2 34 0 864 102 24 0 chr2 204983038 204983165 -48273418 - AluSg/x SINE Alu -18 292 163 251 224 20 20 chr2 204983333 204983431 -48273152 + G-rich Low_complexity Low_complexity 3 100 0 235 200 0 0 chr2 204983682 204983727 -48272856 + MER69 DNA AcHobo 2479 2523 -3 2129 125 0 0 chr2 204983773 204984062 -48272521 + AluSx SINE Alu 1 289 -23 393 311 0 40 chr2 204984740 204984888 -48271695 - L2 LINE L2 -4 3309 3168 309 182 31 0 chr2 204984937 204985025 -48271558 + MLT1J2 LTR MaLR 66 176 -291 238 217 0 0 chr2 204985117 204985163 -48271420 + MLT1J2 LTR MaLR 277 322 -128 526 296 114 29 chr2 204985307 204985648 -48270935 + MLT1J2 LTR MaLR 68 437 -13 279 333 54 0 chr2 204985759 204985852 -48270731 - L2 LINE L2 -269 3044 2947 447 243 14 19 chr2 204985852 204986060 -48270523 + AluJb SINE Alu 1 311 -1 189 0 0 0 chr2 204986062 204986083 -48270500 + (GGAGAA)n Simple_repeat Simple_repeat 6 26 0 279 0 0 0 chr2 204986823 204986854 -48269729 + (CTG)n Simple_repeat Simple_repeat 2 32 0 270 236 34 45 chr2 204987445 204987534 -48269049 - MIR SINE MIR -92 170 83 1886 111 36 7 chr2 204987991 204988270 -48268313 + AluSx SINE Alu 1 287 -25 661 232 121 11 chr2 204988824 204989014 -48267569 - L1ME3A LINE L1 -3 6167 5957 23 0 0 0 chr2 204989716 204989739 -48266844 + AT_rich Low_complexity Low_complexity 1 23 0 30 59 0 0 chr2 204989784 204989835 -48266748 + AT_rich Low_complexity Low_complexity 1 51 0 26 50 0 0 chr2 204991601 204991641 -48264942 + AT_rich Low_complexity Low_complexity 1 40 0 3423 104 99 24 chr2 204991830 204992425 -48264158 - MER51C LTR ERV1 0 640 1 709 237 171 62 chr2 204992705 204993139 -48263444 + L1MC4a LINE L1 5495 5975 -1833 1971 201 52 18 chr2 204993291 204993874 -48262709 + L1ME1 LINE L1 4856 5458 -708 2082 215 42 31 chr2 204993876 204994496 -48262087 + L1ME1 LINE L1 5553 6332 -2 2048 75 9 107 chr2 204994547 204994892 -48261691 - AluSx SINE Alu -1 311 1 645 206 54 141 chr2 204994966 204995313 -48261270 + L1MD2 LINE L1 5960 6265 -94 1990 140 7 3 chr2 204995313 204995606 -48260977 + AluSx SINE Alu 1 294 -18 645 206 54 141 chr2 204995606 204995685 -48260898 + L1MD2 LINE L1 6265 6349 -10 21 36 0 0 chr2 204996104 204996132 -48260451 + AT_rich Low_complexity Low_complexity 1 28 0 235 303 13 0 chr2 204998721 204998797 -48257786 + (CATATA)n Simple_repeat Simple_repeat 5 81 0 1836 170 3 3 chr2 204999968 205000279 -48256304 - AluJb SINE Alu -1 311 1 229 339 78 50 chr2 205000891 205000925 -48255658 - L2 LINE L2 -1077 2237 2205 2170 90 17 23 chr2 205000925 205001224 -48255359 + AluSc SINE Alu 2 298 -11 229 339 78 50 chr2 205001224 205001407 -48255176 - L2 LINE L2 -1109 2205 2014 724 128 16 0 chr2 205001864 205001989 -48254594 + L1MB1 LINE L1 6042 6168 0 46 54 0 0 chr2 205002058 205002132 -48254451 + AT_rich Low_complexity Low_complexity 1 74 0 773 306 19 23 chr2 205002151 205002409 -48254174 - MIR SINE MIR -1 261 5 297 216 0 81 chr2 205003270 205003344 -48253239 - MIR SINE MIR -194 68 1 249 217 14 0 chr2 205005073 205005142 -48251441 - L1MC/D LINE L1 -1919 5889 5820 * 286 250 27 11 chr2 205005141 205005258 -48251325 - L1MC4 LINE L1 0 8042 7868 485 321 52 10 chr2 205005379 205005572 -48251011 + MIR SINE MIR 24 224 -38 2162 70 42 7 chr2 205005767 205006053 -48250530 + AluY SINE Alu 1 296 -15 383 315 122 33 chr2 205006440 205006621 -48249962 - L2 LINE L2 0 3272 3076 367 324 103 0 chr2 205006831 205006967 -48249616 - L2 LINE L2 -558 2756 2607 395 211 33 72 chr2 205007103 205007255 -48249328 + L1M4 LINE L1 4591 4736 -1410 1751 135 17 24 chr2 205007961 205008258 -48248325 + AluJb SINE Alu 6 300 -12 182 387 0 0 chr2 205009299 205009374 -48247209 + L2 LINE L2 3189 3263 -9 234 300 0 0 chr2 205009383 205009443 -48247140 - L2 LINE L2 -18 3295 3236 1315 291 147 33 chr2 205009503 205010099 -48246484 + L2 LINE L2 2098 2625 -688 2189 59 20 52 chr2 205010099 205010404 -48246179 - AluY SINE Alu -16 295 1 1315 291 147 33 chr2 205010404 205010881 -48245702 + L2 LINE L2 2625 3313 0 1848 159 0 13 chr2 205011862 205012171 -48244412 - AluJo SINE Alu -7 305 1 249 215 13 51 chr2 205013107 205013186 -48243397 - HAL1 LINE L1 -1644 863 788 260 230 23 35 chr2 205013228 205013315 -48243268 - MLT1L LTR MaLR -325 290 205 2065 134 0 30 chr2 205013960 205014265 -48242318 + AluSx SINE Alu 1 296 -16 612 276 114 34 chr2 205015081 205015378 -48241205 - MLT1I LTR MaLR -10 399 79 231 224 45 0 chr2 205016455 205016522 -48240061 + (TA)n Simple_repeat Simple_repeat 1 70 0 9892 154 23 20 chr2 205016747 205018414 -48238169 - L1MA7 LINE L1 0 7710 6049 1228 185 52 106 chr2 205018414 205018782 -48237801 + MER7A DNA MER2_type 1 346 0 9892 154 23 20 chr2 205018782 205019525 -48237058 - L1MA7 LINE L1 -1661 6049 5170 2152 118 0 0 chr2 205019525 205019814 -48236769 - AluSg SINE Alu -16 294 6 9892 154 23 20 chr2 205019814 205020198 -48236385 - L1MA7 LINE L1 -2540 5170 4789 1190 272 36 7 chr2 205020288 205020869 -48235714 - L1MA7 LINE L1 -4172 3394 2688 1991 142 42 0 chr2 205020869 205021206 -48235377 - MSTB LTR MaLR 0 426 76 353 169 11 23 chr2 205021309 205021426 -48235157 + AluSg/x SINE Alu 199 287 -15 339 191 0 0 chr2 205021471 205021539 -48235044 + (TA)n Simple_repeat Simple_repeat 1 68 0 852 294 95 20 chr2 205022018 205022147 -48234436 + LTR33 LTR ERVL 31 149 -372 2270 110 0 3 chr2 205022147 205022455 -48234128 + AluSc SINE Alu 1 307 -2 852 294 95 20 chr2 205022455 205022778 -48233805 + LTR33 LTR ERVL 149 517 -4 329 182 0 0 chr2 205023385 205023440 -48233143 - Tigger5 DNA MER2_type -3 2320 2266 357 225 0 0 chr2 205023445 205023516 -48233067 + Tigger5 DNA MER2_type 2250 2320 -3 * 395 202 53 11 chr2 205023516 205023592 -48232991 - Tigger5 DNA MER2_type -2240 83 4 553 238 26 15 chr2 205023607 205023876 -48232707 + L1ME3A LINE L1 5841 6165 -5 2154 171 0 24 chr2 205024321 205024695 -48231888 + MLT1A1 LTR MaLR 1 365 0 2385 169 41 9 chr2 205024762 205025251 -48231332 + L1MB3 LINE L1 5658 6158 -25 2097 113 32 0 chr2 205026328 205026612 -48229971 - AluSc SINE Alu -16 293 1 1858 204 42 42 chr2 205026798 205027171 -48229412 - MLT1D LTR MaLR -3 502 127 2583 92 0 67 chr2 205027171 205027496 -48229087 + THE1B LTR MaLR 1 297 -67 2076 114 0 30 chr2 205027496 205027795 -48228788 + AluY SINE Alu 1 290 -21 2583 92 0 67 chr2 205027795 205027859 -48228724 + THE1B LTR MaLR 297 364 0 1858 204 42 42 chr2 205027859 205027956 -48228627 - MLT1D LTR MaLR -377 128 32 415 255 101 75 chr2 205028127 205028394 -48228189 + MLT1J LTR MaLR 228 501 -10 1510 141 43 50 chr2 205028806 205028961 -48227622 - AluJo SINE Alu -37 275 120 2489 84 40 30 chr2 205028961 205029332 -48227251 - THE1C LTR MaLR 0 375 1 1510 141 43 50 chr2 205029332 205029354 -48227229 - AluJo SINE Alu -192 120 99 2628 85 8 3 chr2 205029354 205029707 -48226876 + THE1A LTR MaLR 1 355 0 1510 141 43 50 chr2 205029707 205029805 -48226778 - AluJo SINE Alu -213 99 1 1143 264 74 64 chr2 205030592 205031091 -48225492 - LTR33 LTR ERVL -3 518 15 2235 64 39 51 chr2 205031161 205031472 -48225111 - AluY SINE Alu -4 307 1 684 133 29 92 chr2 205031865 205031932 -48224651 - L1MB8 LINE L1 -13 6165 6095 2384 86 7 0 chr2 205031932 205032236 -48224347 - AluSp SINE Alu -7 306 1 684 133 29 92 chr2 205032236 205032341 -48224242 - L1MB8 LINE L1 -83 6095 6004 5123 158 22 20 chr2 205032840 205034392 -48222191 - L1MA4 LINE L1 0 6300 4746 603 335 81 73 chr2 205034608 205034814 -48221769 + L2 LINE L2 2152 2355 -917 1801 232 118 28 chr2 205034814 205035358 -48221225 + MLT1E LTR MaLR 1 593 0 603 335 81 73 chr2 205035358 205036246 -48220337 + L2 LINE L2 2355 3254 -18 1876 31 9 9 chr2 205036597 205036826 -48219757 + AluY SINE Alu 83 311 0 552 247 65 18 chr2 205036957 205037127 -48219456 - LTR16C LTR ERVL -2 489 312 273 370 43 39 chr2 205038228 205038482 -48218101 - L2 LINE L2 -1277 2037 1783 310 213 98 14 chr2 205038514 205038618 -48217965 - MIR SINE MIR -38 170 61 743 206 0 7 chr2 205038835 205038976 -48217607 + FRAM SINE Alu 4 143 -33 198 0 0 0 chr2 205038980 205039002 -48217581 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 1067 265 113 13 chr2 205039595 205039968 -48216615 + MLT1J LTR MaLR 25 434 -77 304 281 0 10 chr2 205039965 205040061 -48216522 - LTR16C LTR ERVL -48 443 349 * 1444 173 32 107 chr2 205040626 205041036 -48215547 - MLT1D LTR MaLR -125 380 2 629 300 51 66 chr2 205041464 205042130 -48214453 + L1ME LINE L1 64 719 -5351 1399 222 12 15 chr2 205042135 205042468 -48214115 - MER58B DNA MER1_type -9 332 1 516 257 0 6 chr2 205042470 205042649 -48213934 + L1ME LINE L1 714 891 -5179 2256 104 0 3 chr2 205042999 205043298 -48213285 + AluY SINE Alu 1 298 -13 320 280 116 25 chr2 205043372 205043647 -48212936 - L1ME4a LINE L1 -85 6036 5737 238 269 88 44 chr2 205043829 205044011 -48212572 + MLT1I LTR MaLR 198 387 -22 1002 165 12 6 chr2 205044153 205044317 -48212266 + FRAM SINE Alu 2 166 0 482 258 137 33 chr2 205044434 205044480 -48212103 - MIR SINE MIR -2 260 220 2251 107 3 7 chr2 205044480 205044778 -48211805 - AluSx SINE Alu -15 297 1 482 258 137 33 chr2 205044778 205044804 -48211779 - MIR SINE MIR -42 220 198 2378 206 4 9 chr2 205044804 205045266 -48211317 - LTR40b LTR ERVL 0 462 3 482 258 137 33 chr2 205045266 205045374 -48211209 - MIR SINE MIR -64 198 60 880 182 24 0 chr2 205046140 205046305 -48210278 - AluJo SINE Alu -25 287 119 879 232 53 59 chr2 205046376 205046468 -48210115 - MER2 DNA MER2_type -6 339 248 1712 141 90 11 chr2 205046468 205046745 -48209838 + AluJb SINE Alu 1 299 -13 879 232 53 59 chr2 205046745 205046993 -48209590 - MER2 DNA MER2_type -97 248 1 220 310 0 0 chr2 205047817 205047875 -48208708 - L2 LINE L2 0 3272 3215 6393 181 19 30 chr2 205047925 205049368 -48207215 + L1 LINE L1 3713 5138 -1008 5371 208 14 34 chr2 205049510 205050703 -48205880 - MSTB-int LTR MaLR -482 1169 1 1978 182 56 15 chr2 205050714 205051109 -48205474 - MSTB LTR MaLR -13 413 3 7333 221 33 52 chr2 205051164 205053439 -48203144 - L1M3de LINE L1 -4516 2137 3 380 259 70 21 chr2 205054633 205054776 -48201807 - MIR SINE MIR -31 231 82 287 311 171 40 chr2 205054963 205055284 -48201299 - L2 LINE L2 -557 2757 2395 5243 166 55 18 chr2 205056568 205057988 -48198595 - L1MC2 LINE L1 0 6344 4875 1856 159 28 43 chr2 205058138 205058534 -48198049 - MLT1B LTR MaLR 0 390 1 21 0 0 0 chr2 205058582 205058603 -48197980 + AT_rich Low_complexity Low_complexity 1 21 0 1916 154 9 38 chr2 205059233 205059577 -48197006 - MER1B DNA MER1_type 0 337 4 1064 148 49 54 chr2 205059641 205059844 -48196739 + AluJb SINE Alu 86 287 -25 1682 181 3 7 chr2 205059867 205060166 -48196417 + AluJb SINE Alu 2 299 -13 260 311 60 27 chr2 205060192 205060375 -48196208 + L1ME LINE L1 5315 5503 -2305 488 262 7 0 chr2 205060445 205060590 -48195993 + L1ME LINE L1 5635 5780 -341 29 28 0 0 chr2 205060654 205060690 -48195893 + AT_rich Low_complexity Low_complexity 1 36 0 3758 190 78 21 chr2 205060995 205061810 -48194773 - MER21B LTR ERV1 -1 862 1 542 231 194 0 chr2 205062043 205062259 -48194324 + MER112 DNA MER1_type 2 259 -1 227 338 88 0 chr2 205062771 205062851 -48193732 - MIR3 SINE MIR -32 176 90 680 153 282 6 chr2 205063304 205063467 -48193116 - MER3 DNA MER1_type -1 208 1 200 211 18 147 chr2 205064216 205064325 -48192258 - MIR3 SINE MIR -25 183 89 214 344 21 32 chr2 205064521 205064614 -48191969 - MIR3 SINE MIR -113 95 4 2252 102 7 0 chr2 205064929 205065234 -48191349 + AluY SINE Alu 1 307 -4 416 357 67 41 chr2 205066037 205066547 -48190036 + L2 LINE L2 2232 2754 -560 442 160 80 0 chr2 205067089 205067189 -48189394 + L1MB3 LINE L1 6069 6176 -7 5631 97 10 81 chr2 205067760 205068329 -48188254 - L1MC1 LINE L1 -5 6328 5855 2251 103 10 3 chr2 205068329 205068639 -48187944 - AluSx SINE Alu 0 312 1 5631 97 10 81 chr2 205068639 205069041 -48187542 - L1MC1 LINE L1 -478 5855 5426 855 237 93 14 chr2 205070053 205070268 -48186315 - MIR SINE MIR 0 262 31 261 232 14 0 chr2 205071019 205071088 -48185495 + L1ME LINE L1 5754 5823 -298 209 331 192 15 chr2 205071551 205071681 -48184902 + L2 LINE L2 2894 3046 -226 776 274 59 9 chr2 205071785 205072004 -48184579 - MIR SINE MIR -25 237 8 317 382 72 13 chr2 205072009 205072161 -48184422 + L2 LINE L2 3097 3257 -15 300 308 86 34 chr2 205072141 205072258 -48184325 - L2 LINE L2 -3 3269 3147 * 21 36 0 0 chr2 205072749 205072777 -48183806 + AT_rich Low_complexity Low_complexity 1 28 0 2253 108 3 0 chr2 205074620 205074926 -48181657 + AluSx SINE Alu 1 307 -5 1935 128 25 11 chr2 205075536 205075818 -48180765 + AluSx SINE Alu 5 290 -22 360 226 55 49 chr2 205076057 205076082 -48180501 - L1MA10 LINE L1 -1 6333 6309 3332 209 94 21 chr2 205076082 205077219 -48179364 - L1ME1 LINE L1 -15 6151 4946 1594 157 24 31 chr2 205077221 205077514 -48179069 - AluJb SINE Alu -21 291 1 1704 171 34 3 chr2 205077528 205077855 -48178728 - L1M4 LINE L1 -420 5764 5428 * 7105 224 60 44 chr2 205077851 205078241 -48178342 - L1MB5 LINE L1 -1 6409 6027 183 80 0 0 chr2 205078241 205078266 -48178317 + (CA)n Simple_repeat Simple_repeat 1 25 0 7105 224 60 44 chr2 205078266 205079511 -48177072 - L1MB5 LINE L1 -383 6027 4803 1064 173 50 15 chr2 205079511 205079713 -48176870 + MER6B DNA MER2_type 2 210 0 7105 224 60 44 chr2 205079713 205079791 -48176792 - L1MB5 LINE L1 -1607 4803 4728 379 117 17 0 chr2 205079791 205079851 -48176732 - FLAM SINE Alu -6 127 67 7105 224 60 44 chr2 205079851 205081022 -48175561 - L1MB5 LINE L1 -1682 4728 3577 257 104 0 83 chr2 205081022 205081070 -48175513 + MER57A LTR ERV1 290 333 -70 7105 224 60 44 chr2 205081070 205082113 -48174470 - L1MB5 LINE L1 -2833 3577 2215 557 217 57 29 chr2 205082120 205082295 -48174288 - L1MB5 LINE L1 -4501 1883 1704 767 214 49 44 chr2 205082398 205082508 -48174075 - L1MB5 LINE L1 -4591 1791 1683 2296 83 3 13 chr2 205082508 205082821 -48173762 - AluY SINE Alu 0 311 2 767 214 49 44 chr2 205082821 205082977 -48173606 - L1MB5 LINE L1 -4699 1683 1444 314 116 0 0 chr2 205182990 205183072 -48073511 + Alu SINE Alu 239 320 0 973 310 24 12 chr2 205183077 205183409 -48073174 + MER115 DNA AcHobo 358 693 0 1607 138 8 30 chr2 205184227 205184328 -48072255 + AluSx SINE Alu 40 142 -170 2450 79 3 0 chr2 205184328 205184632 -48071951 + AluSg SINE Alu 1 305 -5 1607 138 8 30 chr2 205184632 205184798 -48071785 + AluSx SINE Alu 142 301 -11 1070 124 12 0 chr2 205184798 205184959 -48071624 + AluSg/x SINE Alu 132 294 -16 258 245 51 41 chr2 205185204 205185302 -48071281 + MIR3 SINE MIR 101 199 -9 739 222 99 6 chr2 205186969 205187033 -48069550 - MER5A DNA MER1_type 0 189 132 2223 112 7 3 chr2 205187033 205187337 -48069246 + AluSg SINE Alu 1 305 -5 739 222 99 6 chr2 205187337 205187443 -48069140 - MER5A DNA MER1_type -57 132 3 218 365 56 28 chr2 205187609 205187858 -48068725 + L2 LINE L2 944 1199 -2115 2177 93 3 14 chr2 205187883 205188174 -48068409 + AluSx SINE Alu 1 288 -24 287 228 0 0 chr2 205188394 205188451 -48068132 + MIR SINE MIR 185 241 -21 469 297 157 19 chr2 205188570 205188998 -48067585 + L2 LINE L2 1629 2115 -1199 235 172 207 0 chr2 205189077 205189135 -48067448 - MLT1K LTR MaLR -5 583 514 377 239 18 9 chr2 205189695 205189808 -48066775 + L1MC4a LINE L1 5819 5932 -1876 333 0 0 0 chr2 205189903 205189940 -48066643 + (TG)n Simple_repeat Simple_repeat 2 38 0 1410 170 114 34 chr2 205189940 205190298 -48066285 + MSTD LTR MaLR 4 390 -6 248 262 182 11 chr2 205190662 205190849 -48065734 + L1ME4a LINE L1 5873 6091 -30 987 194 0 0 chr2 205190943 205191122 -48065461 - AluJb SINE Alu 0 307 129 2129 134 0 0 chr2 205191659 205191957 -48064626 + AluSx SINE Alu 7 304 -8 1587 210 39 104 chr2 205191958 205192547 -48064036 + L1MB7 LINE L1 3088 3613 -2533 1960 149 9 22 chr2 205192547 205192862 -48063721 + AluSx SINE Alu 1 311 -1 1587 210 39 104 chr2 205192862 205193073 -48063510 + L1MB7 LINE L1 3613 3836 -2310 1415 84 0 26 chr2 205193193 205193383 -48063200 - AluY SINE Alu -28 283 99 1508 185 32 75 chr2 205193383 205193630 -48062953 + L1MB7 LINE L1 4027 4283 -1863 1895 152 3 7 chr2 205193630 205193920 -48062663 + AluJb SINE Alu 1 289 -23 1508 185 32 75 chr2 205193920 205194309 -48062274 + L1MB7 LINE L1 4283 4584 -1562 524 193 0 17 chr2 205194291 205194410 -48062173 + L1MB7 LINE L1 4993 5109 -1037 * 4456 163 21 29 chr2 205194415 205195104 -48061479 + L1MB7 LINE L1 5162 5840 -344 2437 116 91 20 chr2 205195104 205195502 -48061081 + MSTB LTR MaLR 1 426 0 4456 163 21 29 chr2 205195502 205195840 -48060743 + L1MB7 LINE L1 5840 6179 -5 363 273 8 4 chr2 205196015 205196147 -48060436 + MIR SINE MIR 5 187 -75 1164 29 7 22 chr2 205196161 205196300 -48060283 + AluY SINE Alu 2 138 -173 1100 197 19 70 chr2 205196451 205196677 -48059906 - L1M4 LINE L1 -3054 3092 2891 2078 139 0 0 chr2 205196677 205196971 -48059612 + AluJb SINE Alu 1 294 -18 1100 197 19 70 chr2 205196971 205197115 -48059468 - L1M4 LINE L1 -3255 2891 2741 359 292 141 11 chr2 205197210 205197395 -48059188 + L1MC4a LINE L1 5750 5958 -1850 369 301 82 11 chr2 205197719 205198001 -48058582 + L1M2 LINE L1 5254 5555 -745 597 110 76 76 chr2 205198022 205198167 -48058416 - MER104 DNA Tc2 -3 177 33 1765 279 46 52 chr2 205198364 205198558 -48058025 - MER115 DNA AcHobo -1 692 498 1969 159 7 0 chr2 205198558 205198859 -48057724 + AluSx SINE Alu 1 303 -9 1765 279 46 52 chr2 205198859 205199360 -48057223 - MER115 DNA AcHobo -195 498 1 1003 139 36 12 chr2 205199521 205199715 -48056868 + AluSg/x SINE Alu 114 311 0 2015 137 0 3 chr2 205200057 205200349 -48056234 + AluJb SINE Alu 1 291 -21 180 365 28 0 chr2 205200546 205200653 -48055930 + L3b LINE CR1 1108 1217 -366 * 270 254 14 14 chr2 205200651 205200722 -48055861 + MIR3 SINE MIR 123 193 -15 315 287 37 29 chr2 205200825 205200961 -48055622 + L3b LINE CR1 1225 1361 -222 211 274 20 0 chr2 205201065 205201116 -48055467 - MIR3 SINE MIR -33 175 124 216 397 53 0 chr2 205201116 205201247 -48055336 - L3 LINE CR1 -360 1217 1080 274 284 116 0 chr2 205202564 205202659 -48053924 + Charlie1 DNA MER1_type 1457 1562 -1199 1468 113 0 0 chr2 205202905 205203117 -48053466 - MSTA LTR MaLR 0 428 217 261 0 0 0 chr2 205203118 205203147 -48053436 + (GA)n Simple_repeat Simple_repeat 1 29 0 595 115 88 9 chr2 205203148 205203261 -48053322 - MSTA LTR MaLR -303 123 2 1143 134 0 48 chr2 205203565 205203751 -48052832 - AluJb SINE Alu -131 181 5 456 301 53 26 chr2 205204069 205204355 -48052228 - L1MDa LINE L1 -805 2096 1703 23 33 0 0 chr2 205204740 205204770 -48051813 + AT_rich Low_complexity Low_complexity 1 30 0 486 248 58 29 chr2 205204796 205204933 -48051650 + MIR3 SINE MIR 32 172 -36 215 205 0 0 chr2 205205413 205205452 -48051131 + L2 LINE L2 3263 3301 -12 2213 120 0 10 chr2 205206009 205206308 -48050275 + AluSq SINE Alu 1 296 -17 2516 59 7 0 chr2 205206821 205207128 -48049455 - AluY SINE Alu -2 309 1 1139 215 9 5 chr2 205207674 205207897 -48048686 - MER58A DNA MER1_type 0 224 1 466 287 139 0 chr2 205208762 205208946 -48047637 + MIR SINE MIR 39 247 -15 2460 60 0 7 chr2 205210370 205210669 -48045914 + AluY SINE Alu 1 297 -14 724 102 9 0 chr2 205210682 205210790 -48045793 + L1MB3 LINE L1 5672 5780 -403 180 0 0 0 chr2 205210862 205210882 -48045701 + (CA)n Simple_repeat Simple_repeat 1 20 0 2194 112 46 5 chr2 205210882 205211249 -48045334 + L1MB3 LINE L1 5794 6175 -8 223 284 0 34 chr2 205211602 205211690 -48044893 + GA-rich Low_complexity Low_complexity 4 88 0 887 213 11 27 chr2 205211932 205212115 -48044468 - MER5A DNA MER1_type -6 183 4 21 0 0 0 chr2 205212233 205212254 -48044329 + AT_rich Low_complexity Low_complexity 1 21 0 694 252 97 15 chr2 205212290 205212496 -48044087 + MIR SINE MIR 13 235 -27 642 266 167 50 chr2 205213357 205213901 -48042682 + MLT1L LTR MaLR 1 608 -7 483 230 34 2 chr2 205213948 205214092 -48042491 + L1MA10 LINE L1 6005 6311 -14 428 246 86 4 chr2 205214110 205214342 -48042241 + L1M4 LINE L1 2788 3038 -3108 189 74 0 0 chr2 205214493 205214520 -48042063 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 586 381 44 86 chr2 205214520 205215019 -48041564 + L1ME3A LINE L1 126 603 -5793 399 143 11 33 chr2 205215048 205215139 -48041444 + L1MA10 LINE L1 6238 6326 -8 2308 87 0 0 chr2 205215139 205215452 -48041131 + AluSg SINE Alu 1 313 0 4919 46 14 41 chr2 205215460 205216117 -48040466 - L1PA6 LINE L1 -2 6152 5514 351 332 19 0 chr2 205216228 205216436 -48040147 + L1M4 LINE L1 3352 3563 -2583 305 240 116 31 chr2 205216503 205216632 -48039951 + L1ME3A LINE L1 2549 2688 -3527 1182 245 68 96 chr2 205216640 205217632 -48038951 + L1ME3A LINE L1 3648 4611 -1604 1015 277 88 29 chr2 205217620 205218209 -48038374 + L1ME3A LINE L1 5397 6020 -219 * 1954 146 40 3 chr2 205218384 205218685 -48037898 - AluJo SINE Alu 0 312 1 344 328 80 32 chr2 205218921 205219232 -48037351 - LTR16C LTR ERVL -28 463 138 879 144 6 6 chr2 205219458 205219639 -48036944 + L1MA7 LINE L1 6111 6291 0 2389 101 0 0 chr2 205219745 205220053 -48036530 - AluSq SINE Alu -5 308 1 291 290 166 93 chr2 205220053 205220312 -48036271 + L2 LINE L2 2995 3272 0 380 344 33 19 chr2 205222534 205222653 -48033930 - L1 LINE L1 -1779 4367 4242 1603 168 65 14 chr2 205222653 205222945 -48033638 - AluJb SINE Alu -5 307 1 380 344 33 19 chr2 205222945 205223037 -48033546 - L1 LINE L1 -1904 4242 4153 973 176 71 19 chr2 205223037 205223247 -48033336 + AluJb SINE Alu 85 305 -7 2262 104 30 0 chr2 205223350 205223648 -48032935 + AluSx SINE Alu 1 307 -5 432 283 6 23 chr2 205223689 205223866 -48032717 - L1 LINE L1 -2169 3977 3804 26 30 0 0 chr2 205223866 205223899 -48032684 + AT_rich Low_complexity Low_complexity 1 33 0 2341 192 29 73 chr2 205223911 205224540 -48032043 - LTR9 LTR ERV1 -11 601 1 288 374 20 24 chr2 205224906 205225155 -48031428 - L2 LINE L2 -614 2700 2453 1584 171 34 12 chr2 205225162 205225483 -48031100 + L1MB8 LINE L1 5724 6051 -127 2789 91 53 100 chr2 205225489 205225589 -48030994 + MER4A LTR ERV1 31 134 -530 473 128 26 0 chr2 205225589 205225667 -48030916 + MADE1 DNA Mariner 1 80 0 2789 91 53 100 chr2 205225667 205226128 -48030455 + MER4A LTR ERV1 134 566 -98 1057 108 0 0 chr2 205226128 205226276 -48030307 - LTR8 LTR ERV1 0 691 544 296 122 0 0 chr2 205226276 205226325 -48030258 - LTR8 LTR ERV1 -642 49 1 742 77 0 10 chr2 205226325 205226429 -48030154 + MER4B LTR ERV1 508 610 0 655 111 8 26 chr2 205226429 205226546 -48030037 + L1MB7 LINE L1 6040 6154 -30 2208 105 0 0 chr2 205226581 205226866 -48029717 - AluSx SINE Alu -27 285 1 388 156 164 90 chr2 205227239 205227327 -48029256 + MER4A LTR ERV1 397 498 -166 240 59 0 0 chr2 205227327 205227361 -48029222 + (TA)n Simple_repeat Simple_repeat 2 35 0 388 156 164 90 chr2 205227361 205227394 -48029189 + MER4A LTR ERV1 498 527 -137 245 204 29 19 chr2 205227561 205227664 -48028919 + (TA)n Simple_repeat Simple_repeat 1 104 0 1350 165 103 8 chr2 205227664 205227925 -48028658 - AluJo SINE Alu -26 286 1 2140 119 143 13 chr2 205228638 205229017 -48027566 - MSTA LTR MaLR 0 428 1 33 25 0 0 chr2 205230852 205230892 -48025691 + AT_rich Low_complexity Low_complexity 1 40 0 2107 144 0 0 chr2 205230965 205231264 -48025319 + AluSx SINE Alu 1 299 -13 834 264 66 81 chr2 205231402 205231736 -48024847 - L1MC/D LINE L1 -1968 5817 5489 252 343 110 41 chr2 205232143 205232289 -48024294 - L2 LINE L2 -17 3255 3100 433 243 52 54 chr2 205232760 205232985 -48023598 + L1ME LINE L1 5624 5845 -304 257 252 48 10 chr2 205232964 205233067 -48023516 + L1ME LINE L1 5786 5892 -229 * 260 305 0 0 chr2 205233102 205233184 -48023399 + (CATATA)n Simple_repeat Simple_repeat 3 84 0 683 257 67 57 chr2 205233187 205233518 -48023065 - MLT1I LTR MaLR -4 405 72 499 127 55 11 chr2 205234689 205234812 -48021771 + L1MC3 LINE L1 7675 7785 0 449 181 104 114 chr2 205235360 205235484 -48021099 + MER3 DNA MER1_type 19 142 -67 1518 69 0 23 chr2 205235484 205235700 -48020883 + L1MA3 LINE L1 6095 6305 0 449 181 104 114 chr2 205235700 205235768 -48020815 + MER3 DNA MER1_type 142 209 0 901 134 6 6 chr2 205235830 205235994 -48020589 - Charlie1a DNA MER1_type 0 1455 1292 * 957 176 69 37 chr2 205235989 205236234 -48020349 - Charlie1a DNA MER1_type -849 606 354 884 196 182 32 chr2 205236231 205236511 -48020072 - Charlie1a DNA MER1_type -1127 328 7 * 1393 226 129 29 chr2 205237937 205238068 -48018515 - L2 LINE L2 -883 2431 2314 1921 151 3 3 chr2 205238068 205238360 -48018223 + AluJb SINE Alu 1 292 -20 1393 226 129 29 chr2 205238360 205238669 -48017914 - L2 LINE L2 -1000 2314 1937 1740 167 13 35 chr2 205238669 205238980 -48017603 - AluJb SINE Alu -8 304 1 1393 226 129 29 chr2 205238980 205239020 -48017563 - L2 LINE L2 -1377 1937 1902 299 215 0 46 chr2 205239020 205239085 -48017498 - L2 LINE L2 -1377 1937 1876 1072 136 0 35 chr2 205239207 205239376 -48017207 - FRAM SINE Alu -14 162 1 2181 56 0 0 chr2 205239976 205240246 -48016337 - L1PA5 LINE L1 -8 6146 5877 242 176 40 40 chr2 205241705 205241779 -48014804 + LTR67 LTR ERVL 484 557 0 848 183 7 0 chr2 205241820 205241962 -48014621 - FLAM_C SINE Alu 0 143 1 830 217 43 0 chr2 205242332 205242493 -48014090 - FAM SINE Alu -17 168 1 293 292 14 62 chr2 205243152 205243296 -48013287 - L2 LINE L2 -580 2734 2598 2331 101 0 0 chr2 205243377 205243674 -48012909 - AluY SINE Alu -14 297 1 189 149 128 21 chr2 205243691 205243738 -48012845 - L2 LINE L2 0 3313 3262 930 292 80 31 chr2 205243788 205244275 -48012308 - L2 LINE L2 -777 2537 2027 303 191 0 0 chr2 205244275 205244343 -48012240 + (ATGGTG)n Simple_repeat Simple_repeat 5 72 0 338 299 32 3 chr2 205244367 205244547 -48012036 - MIR SINE MIR -1 261 17 324 0 0 0 chr2 205245037 205245073 -48011510 + (GA)n Simple_repeat Simple_repeat 2 37 0 237 320 120 20 chr2 205246457 205246607 -48009976 + L3b LINE CR1 1103 1267 -316 2093 109 14 0 chr2 205247247 205247522 -48009061 - AluSx SINE Alu -14 298 20 279 206 0 16 chr2 205247789 205247852 -48008731 + L1ME4a LINE L1 5591 5652 -469 475 239 168 30 chr2 205247878 205248217 -48008366 + L1ME4a LINE L1 5717 6102 -19 249 218 73 0 chr2 205248239 205248294 -48008289 + MIR3 SINE MIR 135 193 -15 183 267 0 50 chr2 205248383 205248443 -48008140 + L2 LINE L2 3165 3221 -92 1915 156 3 17 chr2 205248637 205248932 -48007651 + AluJb SINE Alu 1 291 -21 1704 147 17 53 chr2 205248964 205249324 -48007259 + L1MC1 LINE L1 5978 6324 -9 214 196 0 18 chr2 205249330 205249386 -48007197 + (CAAA)n Simple_repeat Simple_repeat 3 57 0 501 17 0 0 chr2 205250649 205250707 -48005876 + (TG)n Simple_repeat Simple_repeat 1 58 0 229 193 136 23 chr2 205250839 205250927 -48005656 + LTR37B LTR ERV1 1 98 -370 2148 105 3 52 chr2 205250927 205251251 -48005332 + AluSg SINE Alu 1 308 -2 2315 107 0 0 chr2 205251357 205251657 -48004926 - AluSx SINE Alu -12 300 1 898 196 30 33 chr2 205251680 205251697 -48004886 + LTR37B LTR ERV1 199 215 -253 216 0 0 0 chr2 205251697 205251721 -48004862 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 898 196 30 33 chr2 205251721 205251974 -48004609 + LTR37B LTR ERV1 215 468 0 180 0 0 0 chr2 205253480 205253500 -48003083 + (A)n Simple_repeat Simple_repeat 1 20 0 25 0 0 0 chr2 205253679 205253704 -48002879 + AT_rich Low_complexity Low_complexity 1 25 0 767 137 0 8 chr2 205254361 205254478 -48002105 - FLAM_C SINE Alu -17 126 11 2093 104 28 0 chr2 205255348 205255637 -48000946 - AluSx SINE Alu -13 299 3 195 328 51 51 chr2 205256573 205256768 -47999815 - L2 LINE L2 -6 3307 3113 1787 138 47 0 chr2 205256946 205257244 -47999339 - MER46B DNA MER2_type 0 236 50 238 162 0 0 chr2 205257250 205257287 -47999296 + tRNA-Asp-GAC tRNA tRNA 1 37 -38 569 210 98 7 chr2 205257649 205257792 -47998791 + MER3 DNA MER1_type 50 205 -4 192 77 0 0 chr2 205257846 205257872 -47998711 + (TTTTA)n Simple_repeat Simple_repeat 1 26 0 896 209 0 0 chr2 205257877 205258025 -47998558 - FAM SINE Alu -33 152 5 2212 124 0 0 chr2 205258204 205258503 -47998080 + AluSx SINE Alu 1 299 -13 23 33 0 0 chr2 205259210 205259240 -47997343 + AT_rich Low_complexity Low_complexity 1 30 0 8633 154 14 3 chr2 205259661 205261945 -47994638 - L1PA13 LINE L1 -8 6155 3853 21 36 0 0 chr2 205262514 205262542 -47994041 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 205262852 205262880 -47993703 + AT_rich Low_complexity Low_complexity 1 28 0 340 109 0 16 chr2 205262989 205263053 -47993530 + L1PB3 LINE L1 6092 6154 0 2412 92 0 0 chr2 205264948 205265252 -47991331 - AluSx SINE Alu -8 304 1 2041 87 0 0 chr2 205265499 205265753 -47990830 - AluSc SINE Alu -21 288 35 1861 92 4 0 chr2 205265926 205266216 -47990367 + AluY SINE Alu 34 324 0 347 310 18 26 chr2 205266392 205266505 -47990078 - L2 LINE L2 -5 3267 3156 1314 247 86 27 chr2 205267212 205267839 -47988744 + L1MC5 LINE L1 7268 7931 -30 2550 48 0 10 chr2 205268364 205268675 -47987908 + AluY SINE Alu 1 308 -3 1783 166 7 10 chr2 205268728 205269024 -47987559 - AluJb SINE Alu -17 295 1 2274 221 80 82 chr2 205269817 205271103 -47985480 + L1MC5 LINE L1 6476 7746 -215 22 35 0 0 chr2 205271784 205271813 -47984770 + AT_rich Low_complexity Low_complexity 1 29 0 975 208 79 0 chr2 205272116 205272356 -47984227 - MIR SINE MIR -3 259 1 266 235 51 61 chr2 205272695 205272793 -47983790 - MIR SINE MIR -82 126 30 758 331 155 23 chr2 205272801 205273272 -47983311 - L3 LINE CR1 -102 1475 943 2498 77 0 0 chr2 205273310 205273621 -47982962 + AluY SINE Alu 1 311 0 596 160 0 0 chr2 205275160 205275254 -47981329 + FLAM_A SINE Alu 36 129 -13 2031 121 59 0 chr2 205275353 205275643 -47980940 + AluSx SINE Alu 1 307 -5 2063 128 3 3 chr2 205276727 205277023 -47979560 + AluSx SINE Alu 1 296 -16 692 258 129 56 chr2 205278445 205278547 -47978036 + MLT1J1 LTR MaLR 1 94 -352 2149 88 0 14 chr2 205278547 205278852 -47977731 + AluSq SINE Alu 4 304 0 692 258 129 56 chr2 205278852 205279144 -47977439 + MLT1J1 LTR MaLR 94 425 -21 2416 72 3 7 chr2 205279436 205279741 -47976842 + AluY SINE Alu 1 304 -7 1571 179 6 63 chr2 205280811 205281129 -47975454 - AluJo SINE Alu -12 300 1 243 0 0 0 chr2 205281188 205281215 -47975368 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 198 103 0 0 chr2 205281216 205281245 -47975338 + (TC)n Simple_repeat Simple_repeat 2 30 0 484 102 24 118 chr2 205281932 205282059 -47974524 + L1MA10 LINE L1 6220 6334 0 2201 81 0 0 chr2 205282118 205282390 -47974193 + AluSg SINE Alu 39 310 0 1613 276 102 35 chr2 205282786 205283255 -47973328 - MER115 DNA AcHobo 0 693 168 2313 62 35 0 chr2 205283255 205283544 -47973039 + AluSc SINE Alu 1 299 -10 1613 276 102 35 chr2 205283544 205283723 -47972860 - MER115 DNA AcHobo -525 168 2 41661 38 21 12 chr2 205284387 205290486 -47966097 + L1HS LINE L1 1 6155 0 21 0 0 0 chr2 205290486 205290507 -47966076 + AT_rich Low_complexity Low_complexity 1 21 0 651 259 64 28 chr2 205290798 205291049 -47965534 + MIR SINE MIR 2 261 -1 1031 142 0 2 chr2 205291219 205291473 -47965110 + AluSx SINE Alu 1 307 -3 1871 172 54 3 chr2 205292587 205292936 -47963647 + MER68 LTR ERV1 1 367 -195 1142 228 87 64 chr2 205292945 205293203 -47963380 + L2 LINE L2 1525 1798 -1516 2028 132 4 0 chr2 205293203 205293530 -47963053 + AluSx SINE Alu 1 328 0 1142 228 87 64 chr2 205293530 205293674 -47962909 + L2 LINE L2 1798 1937 -1377 1412 131 0 18 chr2 205293675 205293896 -47962687 - AluJo SINE Alu -9 303 87 2434 251 29 25 chr2 205293897 205294578 -47962005 + L2 LINE L2 1922 2605 -709 474 263 83 39 chr2 205294801 205295006 -47961577 - L1MEc LINE L1 -6148 248 35 25 0 0 0 chr2 205295656 205295681 -47960902 + AT_rich Low_complexity Low_complexity 1 25 0 645 303 15 5 chr2 205295858 205296053 -47960530 + L2 LINE L2 2458 2654 -660 24 0 0 0 chr2 205296080 205296104 -47960479 + AT_rich Low_complexity Low_complexity 1 24 0 3774 166 44 31 chr2 205296201 205296971 -47959612 - L1MB8 LINE L1 -22 6156 5377 780 245 72 19 chr2 205297038 205297489 -47959094 + L1ME3A LINE L1 5451 5941 -229 447 247 89 7 chr2 205297598 205297744 -47958839 + L1ME3A LINE L1 6006 6163 -7 719 292 199 18 chr2 205297748 205298209 -47958374 + L2 LINE L2 2697 3312 -1 462 18 0 0 chr2 205301425 205301480 -47955103 + (CA)n Simple_repeat Simple_repeat 2 56 0 2061 117 0 31 chr2 205301536 205301853 -47954730 - AluJb SINE Alu -5 307 1 22 70 0 0 chr2 205302065 205302108 -47954475 + AT_rich Low_complexity Low_complexity 1 43 0 1069 133 12 0 chr2 205302514 205302680 -47953903 - AluSg/x SINE Alu 0 312 145 228 67 0 0 chr2 205305483 205305513 -47951070 + (CCG)n Simple_repeat Simple_repeat 2 31 0 297 331 7 26 chr2 205305741 205305895 -47950688 + GA-rich Low_complexity Low_complexity 3 153 0 202 281 18 0 chr2 205307056 205307113 -47949470 + L2 LINE L2 3256 3313 0 413 239 142 72 chr2 205307147 205307562 -47949021 - L1ME4a LINE L1 -49 6072 5629 520 53 53 0 chr2 205307835 205307910 -47948673 + AluY SINE Alu 216 294 -17 2133 129 0 3 chr2 205308280 205308575 -47948008 - AluSp SINE Alu -19 294 1 2275 104 10 0 chr2 205308885 205309182 -47947401 + AluSg SINE Alu 1 300 -10 7138 42 16 0 chr2 205309451 205310569 -47946014 - L1PA6 LINE L1 -6 6148 5020 721 194 0 22 chr2 205310902 205311036 -47945547 - FLAM_A SINE Alu -2 131 1 2542 154 14 2 chr2 205311190 205311613 -47944970 - MSTA LTR MaLR 0 428 1 2165 143 0 0 chr2 205311669 205311977 -47944606 - AluSx SINE Alu -4 308 1 2031 127 28 0 chr2 205312224 205312515 -47944068 - AluJb SINE Alu -13 299 1 1066 145 0 45 chr2 205312657 205312836 -47943747 - AluJo SINE Alu -21 291 121 953 169 82 24 chr2 205312998 205313205 -47943378 + MER20 DNA MER1_type 1 219 0 2256 118 0 3 chr2 205314142 205314447 -47942136 + AluSx SINE Alu 1 304 -8 591 169 39 19 chr2 205314507 205314661 -47941922 + L1ME4a LINE L1 5964 6120 -1 2058 121 4 0 chr2 205314756 205315037 -47941546 - AluSq SINE Alu -31 282 1 507 215 0 0 chr2 205316296 205316408 -47940175 + MLT1E2 LTR MaLR 394 626 0 1431 245 50 29 chr2 205316410 205317074 -47939509 - L1ME4a LINE L1 -725 5439 4762 233 257 0 0 chr2 205317081 205317151 -47939432 - L1ME4a LINE L1 -1327 4819 4750 1359 161 77 4 chr2 205317151 205317399 -47939184 - AluJo SINE Alu -18 294 29 535 237 126 31 chr2 205317400 205317822 -47938761 - L1ME4a LINE L1 -1386 4760 4299 232 224 102 31 chr2 205317838 205318034 -47938549 - L1M4 LINE L1 -1641 4505 4296 671 129 69 0 chr2 205318124 205318240 -47938343 - MLT1E2 LTR MaLR -502 124 1 1108 281 82 12 chr2 205318240 205318707 -47937876 - L1M4 LINE L1 -1978 4168 3670 1584 178 66 11 chr2 205318846 205319133 -47937450 + AluJo SINE Alu 1 303 -9 24 0 0 0 chr2 205319138 205319162 -47937421 + AT_rich Low_complexity Low_complexity 1 24 0 331 271 188 41 chr2 205321579 205321632 -47934951 - MIR SINE MIR -22 240 196 3841 132 46 35 chr2 205321632 205322377 -47934206 - L1MA9 LINE L1 -2 6310 5558 331 271 188 41 chr2 205322377 205322493 -47934090 - MIR SINE MIR -66 196 46 2286 113 0 0 chr2 205323037 205323330 -47933253 - AluSx SINE Alu -15 297 5 37694 57 25 0 chr2 205323740 205328842 -47927741 + L1P LINE L1 142 5370 -776 2493 78 7 0 chr2 205328949 205329256 -47927327 - AluSp SINE Alu -4 309 1 1156 304 111 16 chr2 205330328 205330887 -47925696 + L2 LINE L2 687 1298 -2016 2056 138 3 13 chr2 205330888 205331199 -47925384 + AluSp SINE Alu 1 308 -5 693 239 77 39 chr2 205331201 205331461 -47925122 + L2 LINE L2 1895 2164 -1150 892 216 161 69 chr2 205331484 205331503 -47925080 - MER65B LTR ERV1 0 531 515 189 0 0 0 chr2 205331503 205331524 -47925059 + (TA)n Simple_repeat Simple_repeat 2 22 0 892 216 161 69 chr2 205331524 205331926 -47924657 - MER65B LTR ERV1 -16 515 1 1156 274 66 53 chr2 205331989 205332191 -47924392 + L2 LINE L2 2496 2694 -619 3222 58 2 2 chr2 205332191 205332602 -47923981 + L1PA8 LINE L1 5762 6172 0 1156 274 66 53 chr2 205332602 205332929 -47923654 + L2 LINE L2 2694 3030 -283 1799 231 120 28 chr2 205334237 205334779 -47921804 + MLT1E LTR MaLR 2 593 0 191 248 158 59 chr2 205335018 205335119 -47921464 + MIR3 SINE MIR 97 207 -1 1143 153 11 0 chr2 205335611 205335788 -47920795 + AluJb SINE Alu 83 261 -51 291 93 0 0 chr2 205335788 205335831 -47920752 + (CAAAA)n Simple_repeat Simple_repeat 4 46 0 240 111 0 0 chr2 205337355 205337391 -47919192 + (GA)n Simple_repeat Simple_repeat 1 36 0 201 195 0 0 chr2 205338904 205338945 -47917638 + (CA)n Simple_repeat Simple_repeat 2 42 0 1454 165 13 50 chr2 205340983 205341286 -47915297 - AluJo SINE Alu -20 292 1 2102 133 0 10 chr2 205343580 205343880 -47912703 - AluJb SINE Alu -15 297 1 2139 110 0 43 chr2 205343890 205344217 -47912366 - AluSq SINE Alu 0 313 1 340 170 170 57 chr2 205344624 205344730 -47911853 + L2 LINE L2 3153 3270 -2 488 261 176 0 chr2 205345517 205345670 -47910913 + MER5A DNA MER1_type 10 189 0 453 301 78 19 chr2 205345938 205346017 -47910566 + L1ME LINE L1 5520 5593 -528 2352 92 3 3 chr2 205346017 205346320 -47910263 + AluSg SINE Alu 1 303 -7 453 301 78 19 chr2 205346320 205346420 -47910163 + L1ME LINE L1 5593 5686 -435 909 162 192 0 chr2 205346420 205346618 -47909965 + MER46A DNA MER2_type 1 236 0 453 301 78 19 chr2 205346618 205346706 -47909877 + L1ME LINE L1 5686 5804 -317 35 41 0 0 chr2 205346792 205346841 -47909742 + AT_rich Low_complexity Low_complexity 1 49 0 2337 99 3 0 chr2 205346841 205347143 -47909440 - AluSp SINE Alu -10 303 1 21 0 0 0 chr2 205348788 205348809 -47907774 + AT_rich Low_complexity Low_complexity 1 21 0 1031 256 74 16 chr2 205348842 205348958 -47907625 + L1MC4a LINE L1 5562 5670 -2138 2259 92 0 0 chr2 205348958 205349287 -47907296 - AluY SINE Alu 0 329 1 1031 256 74 16 chr2 205349287 205349548 -47907035 + L1MC4a LINE L1 5670 5962 -1846 2059 100 0 0 chr2 205350188 205350459 -47906124 + AluSg SINE Alu 37 307 -3 215 296 173 0 chr2 205351702 205351783 -47904800 + L2 LINE L2 3219 3313 0 345 244 16 65 chr2 205351857 205351980 -47904603 + MIR SINE MIR 59 175 -87 1829 142 24 27 chr2 205352419 205352715 -47903868 + AluSx SINE Alu 1 295 -17 279 268 73 0 chr2 205353577 205353659 -47902924 + L2 LINE L2 3217 3304 -9 514 289 95 45 chr2 205353936 205354316 -47902267 + L1MC/D LINE L1 5410 5808 -2000 25 0 0 0 chr2 205354445 205354470 -47902113 + AT_rich Low_complexity Low_complexity 1 25 0 2292 86 0 10 chr2 205355555 205355856 -47900727 + AluY SINE Alu 1 298 -13 320 315 63 14 chr2 205355921 205356064 -47900519 + MIR SINE MIR 89 238 -24 1705 147 28 11 chr2 205356220 205356505 -47900078 + AluJb SINE Alu 5 294 -18 696 278 137 20 chr2 205356519 205356922 -47899661 + L1ME4a LINE L1 5667 6116 -5 2188 98 3 0 chr2 205358500 205358785 -47897798 - AluSx SINE Alu -16 296 11 1960 136 25 0 chr2 205358793 205359072 -47897511 - AluSx SINE Alu -26 286 1 344 271 8 38 chr2 205359398 205359531 -47897052 + GA-rich Low_complexity Low_complexity 3 131 0 216 0 0 0 chr2 205360809 205360833 -47895750 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2332 98 0 0 chr2 205360876 205361173 -47895410 - AluSx SINE Alu -15 297 1 456 295 86 0 chr2 205363591 205363765 -47892818 + MIR SINE MIR 53 240 -22 2111 120 13 0 chr2 205363905 205364204 -47892379 + AluSx SINE Alu 2 304 -8 402 320 0 0 chr2 205365010 205365160 -47891423 + (TGG)n Simple_repeat Simple_repeat 1 150 0 632 271 158 23 chr2 205366283 205366586 -47889997 + L1MC/D LINE L1 5254 5597 -2211 806 213 107 175 chr2 205366981 205368148 -47888435 + L2 LINE L2 2221 3313 0 467 251 236 26 chr2 205368211 205368402 -47888181 - MIR SINE MIR -13 249 19 625 272 71 13 chr2 205368783 205369007 -47887576 - MIR SINE MIR -3 259 23 276 239 6 15 chr2 205369074 205369153 -47887430 - L1MC5 LINE L1 -1 8041 7845 2206 106 0 57 chr2 205369182 205369513 -47887070 - AluSx SINE Alu 0 312 1 1533 110 46 5 chr2 205369804 205370022 -47886561 + MER30 DNA MER1_type 1 227 -3 23 33 0 0 chr2 205370163 205370193 -47886390 + AT_rich Low_complexity Low_complexity 1 30 0 6738 65 2 3 chr2 205370197 205371055 -47885528 - L1PA6 LINE L1 -1 6153 5297 966 253 157 47 chr2 205371670 205372115 -47884468 + L2 LINE L2 2565 3104 -209 776 211 0 0 chr2 205372115 205372243 -47884340 + FLAM_A SINE Alu 1 128 -5 966 253 157 47 chr2 205372243 205372479 -47884104 + L2 LINE L2 3104 3313 0 535 281 39 0 chr2 205372536 205372689 -47883894 - MIR SINE MIR -22 240 82 187 302 0 48 chr2 205372712 205372775 -47883808 - MIR3 SINE MIR -25 183 124 468 248 62 8 chr2 205374343 205374472 -47882111 - MIR SINE MIR -113 149 14 582 348 67 12 chr2 205374980 205375322 -47881261 - L2 LINE L2 -82 3231 2871 314 263 0 0 chr2 205375325 205375401 -47881182 + L1ME LINE L1 5493 5568 -553 1725 259 131 18 chr2 205375550 205376380 -47880203 - L2 LINE L2 0 3313 2397 5873 232 61 28 chr2 205376545 205378392 -47878191 - L1M4 LINE L1 -1794 4352 2444 597 126 34 0 chr2 205378520 205378639 -47877944 + GA-rich Low_complexity Low_complexity 4 126 0 1781 157 0 33 chr2 205380977 205381276 -47875307 - AluJo SINE Alu -23 289 1 21 36 0 0 chr2 205381737 205381765 -47874818 + AT_rich Low_complexity Low_complexity 1 28 0 5647 115 1 1 chr2 205383012 205383809 -47872774 - L1PA13 LINE L1 -19 6144 5348 354 45 0 0 chr2 205384786 205384830 -47871753 + (CA)n Simple_repeat Simple_repeat 1 44 0 258 32 0 0 chr2 205385464 205385495 -47871088 + (TG)n Simple_repeat Simple_repeat 2 32 0 280 254 68 0 chr2 205387418 205387477 -47869106 - L2 LINE L2 -1 3312 3250 272 253 12 72 chr2 205388690 205388773 -47867810 + L2 LINE L2 3185 3262 -10 731 234 48 103 chr2 205388869 205389121 -47867462 - MER112 DNA MER1_type -6 254 17 361 157 0 0 chr2 205390153 205390204 -47866379 - MER46A DNA MER2_type 0 236 186 818 211 0 0 chr2 205390204 205390346 -47866237 - MER46A DNA MER2_type -94 142 1 236 204 0 23 chr2 205390949 205390993 -47865590 + L2 LINE L2 3136 3178 -94 270 313 82 45 chr2 205391000 205391190 -47865393 + MIR3 SINE MIR 12 196 -12 39983 50 21 0 chr2 205391374 205397183 -47859400 + L1HS LINE L1 221 6155 0 243 114 0 0 chr2 205397183 205397227 -47859356 + (A)n Simple_repeat Simple_repeat 1 44 0 7768 38 14 1 chr2 205397227 205398266 -47858317 + L1PA5 LINE L1 5097 6150 -4 2334 204 85 97 chr2 205398282 205399204 -47857379 - L1M4 LINE L1 -1263 4883 3973 4557 81 2 0 chr2 205399896 205400449 -47856134 + MER41A LTR ERV1 1 554 0 21 57 0 0 chr2 205400692 205400727 -47855856 + AT_rich Low_complexity Low_complexity 1 35 0 558 195 19 117 chr2 205402326 205402480 -47854103 - MER69A DNA AcHobo -1 176 38 202 139 28 0 chr2 205403007 205403043 -47853540 + A-rich Low_complexity Low_complexity 4 40 0 236 326 34 11 chr2 205404904 205404993 -47851590 - L2 LINE L2 -2 3270 3180 491 66 13 40 chr2 205405020 205405096 -47851487 - AluJb SINE Alu -1 308 235 2096 188 162 101 chr2 205405104 205405952 -47850631 + LTR28 LTR ERV1 1 1020 0 1412 182 0 24 chr2 205405952 205406199 -47850384 - AluJb SINE Alu -71 241 1 187 184 82 0 chr2 205406212 205406270 -47850313 - L2 LINE L2 -1 3312 3251 243 61 0 0 chr2 205407632 205407665 -47848918 + (CA)n Simple_repeat Simple_repeat 2 34 0 220 258 22 11 chr2 205407665 205407754 -47848829 + (TA)n Simple_repeat Simple_repeat 1 90 0 381 316 107 30 chr2 205408738 205408972 -47847611 + MIR SINE MIR 4 255 -7 287 260 10 31 chr2 205409498 205409594 -47846989 + L2 LINE L2 2887 2980 -292 739 276 88 0 chr2 205410163 205410391 -47846192 + MIR SINE MIR 15 262 0 22 0 0 0 chr2 205410442 205410464 -47846119 + AT_rich Low_complexity Low_complexity 1 22 0 276 290 168 23 chr2 205410723 205410854 -47845729 + L2 LINE L2 3164 3313 0 183 167 0 0 chr2 205411405 205411447 -47845136 + (CA)n Simple_repeat Simple_repeat 1 42 0 384 329 69 64 chr2 205412145 205412568 -47844015 + L2 LINE L2 2550 2974 -340 398 170 106 21 chr2 205413145 205413239 -47843344 - MIR SINE MIR 0 262 161 394 267 123 20 chr2 205413264 205413459 -47843124 - MIR SINE MIR -34 228 14 202 316 113 66 chr2 205413511 205413723 -47842860 + L2 LINE L2 2906 3127 -145 23 0 0 0 chr2 205414205 205414228 -47842355 + AT_rich Low_complexity Low_complexity 1 23 0 2480 87 0 0 chr2 205414695 205415005 -47841578 + AluSg SINE Alu 1 310 0 1157 264 49 53 chr2 205415481 205415993 -47840590 - L1MC4 LINE L1 -151 7891 7381 1021 128 6 0 chr2 205415993 205416157 -47840426 + L1MB3 LINE L1 6019 6183 0 1157 264 49 53 chr2 205416157 205416318 -47840265 - L1MC4 LINE L1 -661 7381 7221 257 222 268 21 chr2 205416361 205416604 -47839979 - L1MC4a LINE L1 -1547 6261 5959 192 40 0 0 chr2 205416604 205416629 -47839954 + (CAAAAA)n Simple_repeat Simple_repeat 4 28 0 1764 249 46 15 chr2 205416636 205417181 -47839402 - L1MC4a LINE L1 -1933 5875 5314 2345 93 3 0 chr2 205417488 205417788 -47838795 + AluY SINE Alu 1 301 -10 530 152 61 0 chr2 205418022 205418121 -47838462 + L1MB7 LINE L1 5944 6048 -136 934 288 78 30 chr2 205418219 205418664 -47837919 - L1ME4a LINE L1 -5 6116 5637 2078 149 0 0 chr2 205418664 205418959 -47837624 - AluSx SINE Alu -15 297 3 934 288 78 30 chr2 205418959 205419075 -47837508 - L1ME4a LINE L1 -484 5637 5528 2056 146 3 13 chr2 205419637 205419953 -47836630 - AluSq SINE Alu 0 313 1 2002 132 0 10 chr2 205420700 205420996 -47835587 + AluSx SINE Alu 1 293 -19 2273 77 0 3 chr2 205421048 205421333 -47835250 + AluY SINE Alu 1 284 -27 29 0 0 0 chr2 205421333 205421362 -47835221 + AT_rich Low_complexity Low_complexity 1 29 0 740 265 78 9 chr2 205422657 205422876 -47833707 + MIR SINE MIR 8 241 -21 1871 146 10 13 chr2 205423097 205423435 -47833148 + AluSx SINE Alu 1 312 0 2326 92 0 3 chr2 205424522 205424814 -47831769 - AluSx SINE Alu -17 295 5 21 0 0 0 chr2 205425490 205425511 -47831072 + AT_rich Low_complexity Low_complexity 1 21 0 430 193 12 0 chr2 205425524 205425607 -47830976 + AluJ/FRAM SINE Alu 216 299 -13 2251 113 13 0 chr2 205425901 205426201 -47830382 + AluSx SINE Alu 1 304 -8 242 160 0 40 chr2 205426263 205426338 -47830245 + A-rich Low_complexity Low_complexity 1 72 0 223 301 27 14 chr2 205426894 205426967 -47829616 + MER5A DNA MER1_type 2 75 -114 2533 58 3 0 chr2 205426968 205427276 -47829307 + AluY SINE Alu 1 309 -2 23 0 0 0 chr2 205430575 205430598 -47825985 + AT_rich Low_complexity Low_complexity 1 23 0 591 311 52 8 chr2 205431477 205431725 -47824858 - MIR SINE MIR 0 262 4 213 94 0 0 chr2 205431741 205431773 -47824810 + (TTCC)n Simple_repeat Simple_repeat 1 32 0 2048 126 13 0 chr2 205431773 205432075 -47824508 - AluSg SINE Alu -4 306 1 998 92 30 0 chr2 205432075 205432206 -47824377 - AluSq/x SINE Alu -178 135 1 1923 132 13 3 chr2 205432466 205432769 -47823814 + AluJb SINE Alu 2 307 -5 1975 142 0 7 chr2 205432839 205433228 -47823355 + AluSq SINE Alu 3 389 0 340 284 133 18 chr2 205433388 205433606 -47822977 - L1MC/D LINE L1 -2534 5508 5266 669 185 17 0 chr2 205433975 205434094 -47822489 - FLAM_A SINE Alu -12 121 1 447 279 106 89 chr2 205434500 205434848 -47821735 + L2 LINE L2 2919 3272 0 2321 116 0 3 chr2 205434916 205435227 -47821356 + AluSq SINE Alu 1 310 -3 1807 115 12 0 chr2 205435478 205435731 -47820852 - AluSg1 SINE Alu -12 297 42 260 228 35 0 chr2 205437480 205437537 -47819046 - L2 LINE L2 -8 3305 3247 313 221 0 13 chr2 205437790 205437867 -47818716 + MER116 DNA Mariner 5 80 0 1436 131 0 0 chr2 205437979 205438208 -47818375 + AluSg/x SINE Alu 87 315 0 385 291 125 10 chr2 205438916 205439212 -47817371 - L1ME4a LINE L1 -71 6050 5721 23 0 0 0 chr2 205439531 205439554 -47817029 + AT_rich Low_complexity Low_complexity 1 23 0 391 18 179 0 chr2 205441323 205441379 -47815204 + MADE1 DNA Mariner 8 73 -7 878 191 0 25 chr2 205441379 205441541 -47815042 + FRAM SINE Alu 1 157 -19 21 36 0 0 chr2 205441869 205441897 -47814686 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 205442027 205442049 -47814534 + AT_rich Low_complexity Low_complexity 1 22 0 5693 99 15 2 chr2 205442203 205443340 -47813243 - L1PA10 LINE L1 0 6168 4994 751 204 70 39 chr2 205443357 205443587 -47812996 - MER5C DNA MER1_type 0 324 88 2232 101 13 7 chr2 205443669 205443975 -47812608 - AluSx SINE Alu -2 310 3 221 238 25 62 chr2 205444491 205444571 -47812012 + L2 LINE L2 3237 3313 0 350 288 118 41 chr2 205444975 205445145 -47811438 + MER5A DNA MER1_type 6 188 -1 322 309 134 32 chr2 205445518 205445735 -47810848 + MIR SINE MIR 2 240 -22 2738 7 0 0 chr2 205445735 205446031 -47810552 - AluY SINE Alu -14 297 2 1465 239 160 14 chr2 205447467 205448035 -47808548 + MLT2F LTR ERVL 1 651 -12 2446 84 10 0 chr2 205448454 205448798 -47807785 - AluSp SINE Alu 0 347 1 290 289 22 52 chr2 205449178 205449313 -47807270 + L2 LINE L2 3168 3298 -15 296 181 191 29 chr2 205450146 205450251 -47806332 - L2 LINE L2 -3 3310 3189 414 282 76 76 chr2 205450722 205451013 -47805570 + L2 LINE L2 2970 3260 -12 216 260 250 10 chr2 205452244 205452340 -47804243 - MER5B DNA MER1_type -59 119 1 1076 256 70 21 chr2 205453440 205453991 -47802592 + L1ME3 LINE L1 5354 5923 -243 201 108 0 0 chr2 205454168 205454205 -47802378 + (TA)n Simple_repeat Simple_repeat 1 37 0 292 254 18 9 chr2 205454205 205454315 -47802268 + L1MC4 LINE L1 7931 8041 -1 324 0 0 0 chr2 205454394 205454430 -47802153 + (TG)n Simple_repeat Simple_repeat 1 36 0 1665 122 0 8 chr2 205454430 205454667 -47801916 - AluSx SINE Alu -31 281 47 311 333 69 6 chr2 205454668 205454842 -47801741 - L1ME LINE L1 -503 5667 5483 1849 157 11 7 chr2 205454866 205455152 -47801431 - AluJo SINE Alu -25 287 1 1429 75 0 135 chr2 205455177 205455459 -47801124 + L1MA10 LINE L1 6089 6332 -2 2223 91 0 3 chr2 205455465 205455750 -47800833 + AluSx SINE Alu 1 284 -28 189 0 0 0 chr2 205455750 205455771 -47800812 + (CATA)n Simple_repeat Simple_repeat 2 22 0 239 221 18 71 chr2 205455820 205455933 -47800650 - L1ME LINE L1 -2406 5402 5296 279 285 104 7 chr2 205456968 205457112 -47799471 - MARNA DNA Mariner -33 553 396 * 770 267 142 15 chr2 205456974 205457304 -47799279 + MARNA DNA Mariner 40 411 -175 910 152 8 0 chr2 205457388 205457520 -47799063 + FLAM_C SINE Alu 1 133 0 36 23 0 0 chr2 205457524 205457567 -47799016 + AT_rich Low_complexity Low_complexity 1 43 0 28 0 0 0 chr2 205457703 205457731 -47798852 + AT_rich Low_complexity Low_complexity 1 28 0 4057 29 0 0 chr2 205457731 205458176 -47798407 - L1PA3 LINE L1 -3 6152 5708 2085 128 4 0 chr2 205458176 205458457 -47798126 - AluSx SINE Alu -30 282 1 2293 92 0 7 chr2 205459538 205459868 -47796715 + AluSc SINE Alu 1 309 0 217 193 18 83 chr2 205460955 205461064 -47795519 + (CATATA)n Simple_repeat Simple_repeat 4 105 0 226 215 47 47 chr2 205461070 205461177 -47795406 + L1MC4 LINE L1 6603 6709 -1333 21 0 0 0 chr2 205461959 205461980 -47794603 + AT_rich Low_complexity Low_complexity 1 21 0 534 286 130 22 chr2 205462135 205462404 -47794179 - L2 LINE L2 -7 3306 3009 286 303 90 8 chr2 205462410 205462532 -47794051 - MIR SINE MIR -111 151 20 295 179 77 0 chr2 205462596 205462674 -47793909 + MIR SINE MIR 123 206 -56 203 291 68 13 chr2 205464660 205464770 -47791813 - MIR SINE MIR -65 143 29 2476 67 0 3 chr2 205464799 205465098 -47791485 + AluY SINE Alu 1 298 -13 1130 261 89 98 chr2 205465128 205465871 -47790712 + L1MEd LINE L1 33 768 -5351 267 339 37 9 chr2 205466181 205466290 -47790293 - L2 LINE L2 -13 3300 3189 1496 137 59 87 chr2 205467464 205467835 -47788748 + AluJo SINE Alu 1 362 0 224 264 0 19 chr2 205468377 205468430 -47788153 + GA-rich Low_complexity Low_complexity 4 55 0 621 293 27 70 chr2 205468432 205468702 -47787881 - L1ME LINE L1 -426 5744 5489 2840 13 0 0 chr2 205468702 205469010 -47787573 - AluY SINE Alu -3 308 1 621 293 27 70 chr2 205469010 205469070 -47787513 - L1ME LINE L1 -681 5489 5428 687 268 37 0 chr2 205469717 205469881 -47786702 - MIR SINE MIR -73 189 20 3687 195 119 24 chr2 205470011 205470596 -47785987 + L1ME1 LINE L1 4696 5224 -942 2341 72 7 0 chr2 205470596 205470888 -47785695 + AluY SINE Alu 1 294 -17 3687 195 119 24 chr2 205470888 205471647 -47784936 + L1ME1 LINE L1 5224 6161 -5 2385 82 7 10 chr2 205471923 205472228 -47784355 + AluSx SINE Alu 1 304 -8 183 277 15 31 chr2 205473237 205473302 -47783281 - MIR SINE MIR -141 121 58 342 274 26 60 chr2 205473304 205473421 -47783162 - L2 LINE L2 -1 3312 3200 375 60 0 0 chr2 205473511 205473561 -47783022 + (CA)n Simple_repeat Simple_repeat 2 51 0 262 276 0 13 chr2 205473877 205473953 -47782630 + L1ME4a LINE L1 5983 6057 -64 412 206 147 73 chr2 205474236 205474440 -47782143 - MIR SINE MIR -34 228 10 250 189 0 0 chr2 205474580 205474633 -47781950 - MER4-int LTR ERV1 -5438 1160 1108 444 259 42 35 chr2 205474638 205474781 -47781802 + MIR SINE MIR 19 162 -100 271 330 9 26 chr2 205475236 205475351 -47781232 + 5S rRNA rRNA 9 121 0 289 307 143 53 chr2 205477166 205477410 -47779173 + L2 LINE L2 3003 3268 -4 1706 117 44 0 chr2 205478216 205478464 -47778119 - AluSx SINE Alu -53 259 1 730 268 13 35 chr2 205479420 205479651 -47776932 + MIR SINE MIR 28 253 -9 207 293 69 17 chr2 205480478 205480536 -47776047 - L2 LINE L2 -78 3194 3134 236 326 58 0 chr2 205480877 205480963 -47775620 - L2 LINE L2 -13 3259 3169 698 212 7 26 chr2 205481205 205481356 -47775227 - MIR SINE MIR -114 148 1 197 271 0 21 chr2 205481645 205481693 -47774890 + MER5A DNA MER1_type 142 188 -1 257 253 165 0 chr2 205481866 205481957 -47774626 - Charlie7 DNA MER1_type -2495 117 12 1390 195 165 0 chr2 205482523 205482851 -47773732 + MLT1G LTR MaLR 197 578 -12 774 277 117 99 chr2 205483146 205484052 -47772531 + L2 LINE L2 2379 3313 0 1280 130 27 0 chr2 205484141 205484325 -47772258 + MER5A DNA MER1_type 1 189 0 21 0 0 0 chr2 205484408 205484429 -47772154 + AT_rich Low_complexity Low_complexity 1 21 0 2016 161 3 0 chr2 205484438 205484748 -47771835 + AluJb SINE Alu 1 311 -1 573 259 12 30 chr2 205484758 205484924 -47771659 + MER103 DNA DNA 4 166 0 21 36 0 0 chr2 205486027 205486055 -47770528 + AT_rich Low_complexity Low_complexity 1 28 0 1747 154 18 33 chr2 205486065 205486396 -47770187 + L1MC1 LINE L1 5990 6315 -18 2200 132 0 3 chr2 205486524 205486835 -47769748 - AluSq SINE Alu -3 310 1 474 245 7 106 chr2 205487057 205487122 -47769461 + L2 LINE L2 3133 3176 -96 1682 152 65 4 chr2 205487122 205487399 -47769184 - AluSx SINE Alu -18 294 1 474 245 7 106 chr2 205487399 205487484 -47769099 + L2 LINE L2 3176 3268 -4 2222 110 0 0 chr2 205488286 205488598 -47767985 + AluSx SINE Alu 3 314 0 408 71 0 0 chr2 205488705 205488761 -47767822 - L1MB2 LINE L1 0 6171 6116 248 256 83 22 chr2 205488860 205489045 -47767538 + L1ME3A LINE L1 5754 5949 -221 512 283 134 19 chr2 205489225 205489494 -47767089 - L2 LINE L2 -39 3274 2975 1261 230 193 0 chr2 205490400 205490778 -47765805 + MLT1J LTR MaLR 3 453 -58 341 232 203 37 chr2 205490861 205491041 -47765542 - MIR SINE MIR -35 227 14 189 0 0 0 chr2 205491454 205491475 -47765108 + (TAA)n Simple_repeat Simple_repeat 3 23 0 210 37 0 0 chr2 205492116 205492143 -47764440 + (TG)n Simple_repeat Simple_repeat 2 28 0 381 287 182 34 chr2 205492158 205492696 -47763887 - L1ME4a LINE L1 -1 6120 5498 1969 145 0 25 chr2 205492719 205493037 -47763546 + AluJo SINE Alu 2 311 -1 304 242 30 0 chr2 205493089 205493188 -47763395 + L1M LINE L1 5296 5397 -771 370 248 48 0 chr2 205493324 205493429 -47763154 - L1P LINE L1 -1149 4997 4888 974 150 12 25 chr2 205493455 205493615 -47762968 + FRAM SINE Alu 1 155 -21 398 311 33 17 chr2 205493620 205493861 -47762722 - L1ME4a LINE L1 -1278 4868 4624 539 258 139 10 chr2 205494763 205494957 -47761626 + Charlie8 DNA MER1_type 1 219 -2198 229 179 0 54 chr2 205495861 205495917 -47760666 + L1MC5 LINE L1 7625 7677 -284 592 272 144 23 chr2 205496243 205496548 -47760035 - L3 LINE CR1 -135 1442 1101 1401 185 8 8 chr2 205497139 205497377 -47759206 + MER8 DNA MER2_type 1 238 -1 210 71 0 0 chr2 205498300 205498328 -47758255 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 275 302 181 0 chr2 205498536 205498652 -47757931 + L2 LINE L2 3175 3311 -2 811 234 37 66 chr2 205498708 205498890 -47757693 + MLT1J1 LTR MaLR 1 174 -272 2441 79 7 0 chr2 205498890 205499195 -47757388 + AluSx SINE Alu 1 307 -5 811 234 37 66 chr2 205499195 205499285 -47757298 + MLT1J1 LTR MaLR 174 265 -181 1587 183 17 7 chr2 205500399 205500688 -47755895 - MER58B DNA MER1_type 0 341 50 1928 205 29 46 chr2 205500735 205501005 -47755578 + Charlie4a DNA MER1_type 34 294 -1667 1319 148 100 93 chr2 205501005 205501295 -47755288 - AluJb SINE Alu -20 292 1 1928 205 29 46 chr2 205501295 205501506 -47755077 + Charlie4a DNA MER1_type 294 507 -1 904 121 66 24 chr2 205501987 205502153 -47754430 + MLT1B LTR MaLR 1 173 -217 290 200 0 0 chr2 205502123 205502178 -47754405 + MSTC LTR MaLR 177 231 -197 * 446 88 15 0 chr2 205502179 205502247 -47754336 + (TC)n Simple_repeat Simple_repeat 2 70 0 1108 162 58 5 chr2 205502247 205502438 -47754145 + MLT1B LTR MaLR 190 390 0 254 156 22 0 chr2 205503119 205503164 -47753419 + MIR SINE MIR 157 202 -60 276 294 73 19 chr2 205503346 205503479 -47753104 - MER5A DNA MER1_type 0 178 41 228 280 27 0 chr2 205504688 205504763 -47751820 + (CATA)n Simple_repeat Simple_repeat 4 80 0 24 0 0 0 chr2 205505023 205505047 -47751536 + AT_rich Low_complexity Low_complexity 1 24 0 252 316 38 45 chr2 205508060 205508132 -47748451 + MIR SINE MIR 117 189 -73 2387 48 0 17 chr2 205508132 205508419 -47748164 + AluY SINE Alu 1 305 -6 202 39 0 0 chr2 205508419 205508445 -47748138 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 252 316 38 45 chr2 205508452 205508512 -47748071 + MIR SINE MIR 189 248 -14 293 206 0 48 chr2 205509036 205509099 -47747484 - MIR SINE MIR -130 78 19 21 0 0 0 chr2 205509105 205509126 -47747457 + AT_rich Low_complexity Low_complexity 1 21 0 231 267 0 13 chr2 205509220 205509295 -47747288 + (CATATA)n Simple_repeat Simple_repeat 3 76 0 1293 185 4 28 chr2 205509565 205509814 -47746769 - AluJo SINE Alu -69 243 1 189 305 107 38 chr2 205509843 205509974 -47746609 - L2 LINE L2 -570 2744 2605 2045 153 3 0 chr2 205512065 205512373 -47744210 + AluJb SINE Alu 1 309 -3 427 319 124 24 chr2 205512650 205512948 -47743635 - L2 LINE L2 -376 2938 2611 2285 80 7 3 chr2 205513041 205513328 -47743255 + AluSx SINE Alu 1 288 -24 225 0 0 0 chr2 205513331 205513356 -47743227 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 661 209 0 54 chr2 205514148 205514277 -47742306 - FLAM_A SINE Alu -11 122 1 420 250 8 42 chr2 205514354 205514474 -47742109 - L1MC/D LINE L1 -1985 5823 5708 1503 171 16 0 chr2 205516200 205516452 -47740131 - L1PA16 LINE L1 0 6166 5911 1956 142 0 16 chr2 205517101 205517410 -47739173 - AluJb SINE Alu -8 304 1 197 316 202 18 chr2 205517466 205517580 -47739003 - MER5B DNA MER1_type -14 164 30 494 280 55 11 chr2 205517630 205517812 -47738771 + L1ME4a LINE L1 5597 5786 -335 3739 153 57 66 chr2 205517815 205518647 -47737936 + L1MB5 LINE L1 5351 6174 0 385 211 226 10 chr2 205518640 205518839 -47737744 + L1ME4a LINE L1 5769 6010 -111 * 180 300 54 39 chr2 205518943 205519073 -47737510 + L3 LINE CR1 1097 1228 -349 882 188 30 0 chr2 205519121 205519286 -47737297 - Charlie8 DNA MER1_type -2246 171 2 748 301 101 19 chr2 205519293 205519609 -47736974 + L3 LINE CR1 1192 1533 -44 201 267 238 19 chr2 205519614 205519719 -47736864 + MER5B DNA MER1_type 6 133 -45 486 77 0 0 chr2 205519724 205519795 -47736788 - L1PA16 LINE L1 -498 5656 5588 342 307 124 23 chr2 205519907 205520125 -47736458 - MIR SINE MIR -21 241 2 405 298 184 40 chr2 205520138 205520514 -47736069 - L2 LINE L2 -7 3265 2836 370 286 17 34 chr2 205520755 205520874 -47735709 - L2 LINE L2 0 3272 3156 1859 90 3 114 chr2 205520934 205521268 -47735315 + AluSg1 SINE Alu 1 297 -12 2421 75 0 25 chr2 205523043 205523362 -47733221 + AluY SINE Alu 1 311 0 567 236 36 36 chr2 205523968 205524133 -47732450 - MER117 DNA MER1_type -6 191 27 494 335 82 4 chr2 205524805 205525038 -47731545 - MIR SINE MIR -10 252 2 204 67 0 0 chr2 205526553 205526583 -47730000 + (TC)n Simple_repeat Simple_repeat 2 31 0 207 0 0 0 chr2 205526583 205526606 -47729977 + (CA)n Simple_repeat Simple_repeat 1 23 0 341 262 126 10 chr2 205526989 205527092 -47729491 + L2 LINE L2 3187 3301 -12 187 171 0 24 chr2 205527058 205527099 -47729484 + MIR SINE MIR 223 262 0 * 804 272 34 30 chr2 205528615 205528913 -47727670 + L1ME4a LINE L1 5605 5903 -218 207 262 16 33 chr2 205528913 205528974 -47727609 + L2 LINE L2 3208 3267 -5 380 314 47 6 chr2 205529012 205529184 -47727399 + L1ME4a LINE L1 5943 6121 0 2144 130 7 0 chr2 205529399 205529706 -47726877 - AluSx SINE Alu -3 309 1 227 292 193 25 chr2 205530530 205530691 -47725892 + MIR SINE MIR 20 207 -55 288 0 0 0 chr2 205531399 205531431 -47725152 + (CA)n Simple_repeat Simple_repeat 2 33 0 268 279 0 39 chr2 205532273 205532377 -47724206 + MIR3 SINE MIR 101 200 -8 239 280 27 40 chr2 205532626 205532701 -47723882 + L3b LINE CR1 1460 1533 -50 2269 113 3 13 chr2 205533281 205533592 -47722991 - AluSx SINE Alu -4 308 1 2407 91 0 0 chr2 205533600 205533897 -47722686 - AluSc SINE Alu -12 297 1 361 247 11 21 chr2 205533899 205533992 -47722591 - L1MB3 LINE L1 -33 6150 6059 369 139 63 38 chr2 205533992 205534071 -47722512 + MLT1K LTR MaLR 506 586 -2 24 0 0 0 chr2 205534267 205534291 -47722292 + AT_rich Low_complexity Low_complexity 1 24 0 23 33 0 0 chr2 205534519 205534549 -47722034 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 205534812 205534833 -47721750 + AT_rich Low_complexity Low_complexity 1 21 0 584 299 89 11 chr2 205535617 205535888 -47720695 + MLT1J2 LTR MaLR 155 446 -4 824 262 69 9 chr2 205536684 205536917 -47719666 + MIR SINE MIR 6 252 -10 326 212 42 76 chr2 205537097 205537215 -47719368 + L1ME4a LINE L1 5949 6062 -59 2102 118 4 0 chr2 205537488 205537768 -47718815 - AluSq SINE Alu -32 281 1 557 252 18 5 chr2 205538287 205538453 -47718130 - MIR SINE MIR -6 256 89 360 248 42 54 chr2 205538645 205538843 -47717740 - MIR3 SINE MIR -55 207 15 549 242 16 16 chr2 205539681 205539805 -47716778 + MIR3 SINE MIR 37 160 -48 371 245 0 167 chr2 205539806 205539850 -47716733 - MER5B DNA MER1_type -1 177 127 2072 104 10 7 chr2 205539850 205540138 -47716445 - AluSc SINE Alu -20 289 1 371 245 0 167 chr2 205540138 205540285 -47716298 - MER5B DNA MER1_type -51 127 18 2253 120 0 0 chr2 205540878 205541186 -47715397 + AluSx SINE Alu 1 308 -4 768 264 62 102 chr2 205542669 205543338 -47713245 + L1ME3A LINE L1 5450 6081 -89 2138 123 0 0 chr2 205543409 205543734 -47712849 + AluSx SINE Alu 1 325 0 1345 157 5 5 chr2 205545028 205545238 -47711345 + AluJo SINE Alu 85 294 -18 2151 100 0 7 chr2 205545257 205545538 -47711045 - AluSx SINE Alu -16 296 18 1762 169 3 33 chr2 205546759 205547061 -47709522 + AluJo SINE Alu 1 293 -19 1129 193 33 5 chr2 205547163 205547376 -47709207 + MER20 DNA MER1_type 1 219 0 185 244 22 0 chr2 205547424 205547469 -47709114 - L2 LINE L2 -5 3267 3222 33 0 0 0 chr2 205549017 205549050 -47707533 + AT_rich Low_complexity Low_complexity 1 33 0 653 207 0 25 chr2 205549159 205549280 -47707303 - FLAM_A SINE Alu -19 123 6 808 128 71 7 chr2 205549508 205549649 -47706934 + L1MB1 LINE L1 6017 6166 -2 1848 145 14 7 chr2 205549813 205550109 -47706474 - AluJb SINE Alu -14 298 1 304 333 129 0 chr2 205550121 205550331 -47706252 - L1MC4a LINE L1 -1861 5947 5711 240 65 0 0 chr2 205550441 205550472 -47706111 + tRNA-Arg-AGG tRNA tRNA 1 31 -45 2275 104 3 0 chr2 205550951 205551250 -47705333 + AluSx SINE Alu 1 300 -12 214 71 24 24 chr2 205551313 205551355 -47705228 + (CAATA)n Simple_repeat Simple_repeat 2 43 0 265 254 0 0 chr2 205552330 205552385 -47704198 + GA-rich Low_complexity Low_complexity 2 56 0 766 279 34 98 chr2 205553508 205553917 -47702666 + L2 LINE L2 2889 3271 -1 1077 208 131 89 chr2 205554160 205554320 -47702263 - MLT1J LTR MaLR -10 501 349 2030 112 0 65 chr2 205554320 205554643 -47701940 - AluSx SINE Alu -10 302 1 1077 208 131 89 chr2 205554643 205554873 -47701710 - MLT1J LTR MaLR -162 349 85 1606 156 65 0 chr2 205554873 205555149 -47701434 - AluJb SINE Alu -18 294 1 1077 208 131 89 chr2 205555149 205555238 -47701345 - MLT1J LTR MaLR -426 85 1 2070 124 0 0 chr2 205555727 205556010 -47700573 + AluSx SINE Alu 18 300 -12 575 182 27 9 chr2 205556900 205557010 -47699573 + MER103 DNA DNA 10 121 -45 21 82 0 0 chr2 205557233 205557282 -47699301 + AT_rich Low_complexity Low_complexity 1 49 0 203 254 164 18 chr2 205557701 205557811 -47698772 - L2 LINE L2 0 3313 3188 23 54 0 0 chr2 205557887 205557924 -47698659 + AT_rich Low_complexity Low_complexity 1 37 0 24 0 0 0 chr2 205558920 205558944 -47697639 + AT_rich Low_complexity Low_complexity 1 24 0 2217 141 13 48 chr2 205559154 205559530 -47697053 - MLT1A1 LTR MaLR 0 365 1 450 135 11 90 chr2 205560500 205560589 -47695994 - MER2 DNA MER2_type 0 345 264 1812 150 44 0 chr2 205560610 205560903 -47695680 + AluSg SINE Alu 1 306 -4 1358 136 5 0 chr2 205560904 205561103 -47695480 - MER2 DNA MER2_type -140 205 6 1738 163 3 28 chr2 205561791 205562111 -47694472 - AluJo SINE Alu 0 312 1 850 258 9 26 chr2 205562337 205562566 -47694017 - MIR SINE MIR -37 225 1 274 263 183 7 chr2 205563227 205563364 -47693219 - MIR SINE MIR -70 192 32 1081 240 45 43 chr2 205563806 205564102 -47692481 + MLT2D LTR ERVL 92 491 -29 245 210 16 0 chr2 205564147 205564209 -47692374 + (TATATG)n Simple_repeat Simple_repeat 2 64 0 287 146 0 0 chr2 205564254 205564302 -47692281 + MLT2D LTR ERVL 473 520 0 1837 155 7 16 chr2 205564608 205564918 -47691665 + AluJo SINE Alu 1 307 -5 1256 221 111 74 chr2 205565610 205566162 -47690421 - MLT1L LTR MaLR -2 613 42 844 246 68 5 chr2 205566203 205566423 -47690160 - MIR SINE MIR 0 262 29 32 57 0 0 chr2 205566655 205566708 -47689875 + AT_rich Low_complexity Low_complexity 1 53 0 637 332 104 20 chr2 205566882 205567286 -47689297 - L1ME LINE L1 -363 5758 5321 189 0 0 0 chr2 205567946 205567967 -47688616 + (CCCCG)n Simple_repeat Simple_repeat 2 22 0 2033 50 8 19 chr2 205568023 205568281 -47688302 - AluY SINE Alu -13 298 44 2051 109 31 3 chr2 205569733 205570026 -47686557 + AluSx SINE Alu 6 306 -6 357 82 0 0 chr2 205570201 205570250 -47686333 + (CA)n Simple_repeat Simple_repeat 2 50 0 259 212 0 30 chr2 205570343 205570409 -47686174 - L1MC4 LINE L1 -1340 6702 6639 272 307 126 50 chr2 205571765 205572003 -47684580 + L3 LINE CR1 1305 1560 -17 4264 141 21 62 chr2 205573145 205573178 -47683405 - L1MB3 LINE L1 -2 6181 6148 1406 58 17 0 chr2 205573178 205573352 -47683231 + L1MA1 LINE L1 6126 6302 0 4264 141 21 62 chr2 205573352 205573689 -47682894 - L1MB3 LINE L1 -35 6148 5798 1647 115 14 82 chr2 205573689 205574012 -47682571 - AluSx SINE Alu 0 328 25 4264 141 21 62 chr2 205574012 205574455 -47682128 - L1MB3 LINE L1 -385 5798 5400 253 297 14 0 chr2 205575256 205575330 -47681253 - L2 LINE L2 -11 3261 3187 7917 29 9 0 chr2 205575700 205577080 -47679503 - L1PA4 LINE L1 -3 6152 4765 21 0 0 0 chr2 205577869 205577890 -47678693 + AT_rich Low_complexity Low_complexity 1 21 0 1987 141 0 16 chr2 205578235 205578547 -47678036 + AluSx SINE Alu 1 307 -5 942 269 104 67 chr2 205579384 205579592 -47676991 + MLT1J LTR MaLR 1 200 -311 791 181 0 43 chr2 205579592 205579730 -47676853 + FLAM_A SINE Alu 1 132 -1 942 269 104 67 chr2 205579730 205579952 -47676631 + MLT1J LTR MaLR 200 447 -64 2122 109 6 47 chr2 205580843 205581164 -47675419 - AluSx SINE Alu -4 308 1 252 264 28 14 chr2 205582249 205582321 -47674262 + MIR SINE MIR 69 141 -67 481 229 48 0 chr2 205582587 205582692 -47673891 + L2 LINE L2 3204 3313 0 536 303 73 18 chr2 205584021 205584239 -47672344 - MIR SINE MIR -6 256 27 338 179 134 104 chr2 205584667 205584801 -47671782 + L1ME3A LINE L1 6028 6165 -5 350 318 78 34 chr2 205585279 205585573 -47671010 - L2 LINE L2 -20 3293 2883 337 271 40 68 chr2 205585587 205585764 -47670819 - MER20B DNA MER1_type -605 178 7 900 220 17 6 chr2 205586586 205586759 -47669824 + MER45A DNA AcHobo 1 175 -3 252 257 167 35 chr2 205586762 205586811 -47669772 + MER112 DNA MER1_type 71 112 -148 1765 161 140 6 chr2 205586811 205587133 -47669450 + MLT1A1 LTR MaLR 1 365 0 252 257 167 35 chr2 205587133 205587227 -47669356 + MER112 DNA MER1_type 112 233 -27 1732 125 121 7 chr2 205587233 205587513 -47669070 - AluJb SINE Alu 0 312 1 1279 175 94 111 chr2 205587540 205587845 -47668738 + MLT1A1 LTR MaLR 1 300 -65 2419 86 3 0 chr2 205587845 205588147 -47668436 - AluSg SINE Alu -7 303 1 1279 175 94 111 chr2 205588147 205588212 -47668371 + MLT1A1 LTR MaLR 300 365 0 1309 167 48 12 chr2 205588254 205588505 -47668078 + MLT1A1 LTR MaLR 106 365 0 189 0 0 0 chr2 205589572 205589593 -47666990 + (A)n Simple_repeat Simple_repeat 1 21 0 274 263 183 7 chr2 205590674 205590811 -47665772 - MIR SINE MIR -70 192 32 2115 133 13 29 chr2 205592474 205592507 -47664076 - L1MB3 LINE L1 -2 6181 6149 1427 52 17 0 chr2 205592507 205592681 -47663902 + L1MA1 LINE L1 6126 6302 0 2115 133 13 29 chr2 205592681 205593022 -47663561 - L1MB3 LINE L1 -34 6149 5813 2183 103 0 3 chr2 205593062 205593344 -47663239 - AluSc SINE Alu -28 281 1 376 237 11 21 chr2 205593346 205593439 -47663144 - L1MB3 LINE L1 -33 6150 6059 369 139 63 38 chr2 205593439 205593518 -47663065 + MLT1K LTR MaLR 506 586 -2 24 0 0 0 chr2 205593714 205593738 -47662845 + AT_rich Low_complexity Low_complexity 1 24 0 376 267 131 22 chr2 205594038 205594425 -47662158 - L1M4 LINE L1 -2841 3305 2895 225 0 0 0 chr2 205594425 205594450 -47662133 + (TA)n Simple_repeat Simple_repeat 2 26 0 489 242 4 36 chr2 205594578 205594735 -47661848 + MIR SINE MIR 30 182 -63 746 277 155 8 chr2 205594776 205595144 -47661439 + LTR16A LTR ERVL 29 450 0 1633 142 3 77 chr2 205595238 205595522 -47661061 + AluJo SINE Alu 6 265 -47 1938 160 0 19 chr2 205595522 205595834 -47660749 - AluJb SINE Alu -4 308 3 1633 142 3 77 chr2 205595834 205595872 -47660711 + AluJo SINE Alu 265 304 -8 1299 254 89 37 chr2 205596070 205596415 -47660168 + MER20B DNA MER1_type 1 379 -404 2284 105 3 6 chr2 205596415 205596729 -47659854 + AluSq SINE Alu 1 313 0 1299 254 89 37 chr2 205596729 205596864 -47659719 + MER20B DNA MER1_type 379 506 -277 1027 188 108 8 chr2 205596973 205597213 -47659370 + MER20B DNA MER1_type 520 783 0 336 295 36 36 chr2 205597224 205597348 -47659235 + MER5B DNA MER1_type 4 130 -59 2109 84 4 0 chr2 205597348 205597611 -47658972 - AluY SINE Alu -11 300 37 336 295 36 36 chr2 205597611 205597670 -47658913 + MER5B DNA MER1_type 129 187 -2 197 330 61 17 chr2 205597928 205598043 -47658540 - MIR SINE MIR -55 207 88 1981 84 84 0 chr2 205598778 205599052 -47657531 - AluSx SINE Alu -11 301 5 279 287 59 66 chr2 205599781 205600084 -47656499 + L2 LINE L2 2677 2977 -337 31 0 0 0 chr2 205601365 205601396 -47655187 + AT_rich Low_complexity Low_complexity 1 31 0 2277 90 0 0 chr2 205602392 205602680 -47653903 + AluY SINE Alu 1 288 -23 1506 140 5 0 chr2 205603097 205603311 -47653272 + AluSx SINE Alu 1 215 -97 351 0 0 0 chr2 205604924 205604963 -47651620 + (CA)n Simple_repeat Simple_repeat 2 40 0 2202 122 0 0 chr2 205605024 205605319 -47651264 + AluSx SINE Alu 1 295 -17 1630 140 7 26 chr2 205606790 205607061 -47649522 - AluJo SINE Alu -9 303 38 2789 108 32 7 chr2 205607285 205607693 -47648890 + L1MC1 LINE L1 5916 6333 0 2325 116 0 0 chr2 205608159 205608470 -47648113 + AluSx SINE Alu 2 312 0 4353 134 15 94 chr2 205608743 205609624 -47646959 + L1MA4A LINE L1 5492 6302 -1 2229 214 138 8 chr2 205609621 205610280 -47646303 + L1ME1 LINE L1 5417 6159 -7 1895 78 47 4 chr2 205610287 205610542 -47646041 - AluSx SINE Alu -8 304 39 1922 90 54 0 chr2 205610611 205610889 -47645694 - L1P5 LINE L1 -587 5564 5272 545 181 110 53 chr2 205610948 205611175 -47645408 + Charlie2 DNA MER1_type 2164 2403 -459 457 117 19 48 chr2 205611223 205611326 -47645257 - AluSg/x SINE Alu 0 312 213 1757 185 0 0 chr2 205611353 205611645 -47644938 + AluJo SINE Alu 2 293 -19 313 73 0 0 chr2 205611653 205611694 -47644889 + Alu SINE Alu 1 41 -259 223 70 23 23 chr2 205612628 205612671 -47643912 + (TATTG)n Simple_repeat Simple_repeat 2 44 0 1889 83 35 4 chr2 205612734 205612988 -47643595 - AluSx SINE Alu -12 300 39 1922 90 54 0 chr2 205613057 205613335 -47643248 - L1P5 LINE L1 -587 5564 5272 545 181 110 53 chr2 205613394 205613621 -47642962 + Charlie2 DNA MER1_type 2164 2403 -459 583 133 20 0 chr2 205613669 205613767 -47642816 - AluSg/x SINE Alu 0 309 210 1713 192 0 0 chr2 205613794 205614085 -47642498 + AluJo SINE Alu 2 292 -20 2220 110 3 0 chr2 205614093 205614385 -47642198 + AluSx SINE Alu 1 293 -19 522 168 20 10 chr2 205614447 205614548 -47642035 + Charlie2 DNA MER1_type 2515 2616 -246 6074 64 0 1 chr2 205614552 205615299 -47641284 - L1PA6 LINE L1 -13 6141 5396 1003 195 23 43 chr2 205615299 205615555 -47641028 + Charlie2 DNA MER1_type 2600 2850 -12 1429 189 114 3 chr2 205618142 205618448 -47638135 - MER58B DNA MER1_type -1 340 1 318 303 40 0 chr2 205618489 205618588 -47637995 - MIR3 SINE MIR -49 159 57 1694 154 63 23 chr2 205618639 205618938 -47637645 + AluJb SINE Alu 1 311 -1 241 286 36 12 chr2 205620384 205620468 -47636115 - MIR SINE MIR -70 192 107 21 36 0 0 chr2 205620588 205620616 -47635967 + AT_rich Low_complexity Low_complexity 1 28 0 1944 162 20 0 chr2 205621506 205621809 -47634774 + AluJb SINE Alu 1 309 -3 624 181 116 72 chr2 205621840 205622132 -47634451 - L1MC5 LINE L1 -254 7707 7403 3778 89 15 0 chr2 205622177 205622696 -47633887 + L1PB1 LINE L1 5620 6146 -5 333 320 105 33 chr2 205623517 205623618 -47632965 + MIR SINE MIR 9 101 -161 2284 93 0 69 chr2 205623618 205623952 -47632631 - AluSq SINE Alu -2 311 1 333 320 105 33 chr2 205623952 205624031 -47632552 + MIR SINE MIR 101 202 -60 216 67 0 0 chr2 205624546 205624576 -47632007 + (CATATA)n Simple_repeat Simple_repeat 6 35 0 1047 256 120 22 chr2 205624580 205625265 -47631318 - L2 LINE L2 0 3313 2565 416 259 130 19 chr2 205626144 205626306 -47630277 - MIR3 SINE MIR -10 198 19 21 0 0 0 chr2 205626326 205626347 -47630236 + AT_rich Low_complexity Low_complexity 1 21 0 2065 135 0 25 chr2 205626889 205627208 -47629375 + AluSx SINE Alu 1 311 -1 400 178 37 47 chr2 205627454 205627544 -47629039 - MIR3 SINE MIR -22 186 96 342 281 87 27 chr2 205627544 205627729 -47628854 - MER117 DNA MER1_type -1 196 1 400 178 37 47 chr2 205627729 205627745 -47628838 - MIR3 SINE MIR -112 96 81 317 269 134 8 chr2 205627867 205627986 -47628597 - MER94 DNA DNA 0 134 1 200 111 28 0 chr2 205628470 205628506 -47628077 + GA-rich Low_complexity Low_complexity 3 39 0 284 214 0 0 chr2 205628691 205628747 -47627836 + L1ME4a LINE L1 5959 6014 -107 225 0 0 0 chr2 205628833 205628858 -47627725 + (TA)n Simple_repeat Simple_repeat 2 26 0 564 280 86 16 chr2 205629104 205629347 -47627236 + MIR SINE MIR 3 262 0 420 221 96 10 chr2 205630176 205630280 -47626303 - MER81 DNA DNA -1 113 1 1644 153 65 4 chr2 205630754 205631017 -47625566 + AluJb SINE Alu 2 284 -28 189 0 0 0 chr2 205631017 205631038 -47625545 + (CA)n Simple_repeat Simple_repeat 2 22 0 1644 153 65 4 chr2 205631038 205631049 -47625534 + AluJb SINE Alu 284 293 -19 491 263 45 34 chr2 205631738 205631917 -47624666 + MIR3 SINE MIR 16 196 -12 26 0 0 0 chr2 205633071 205633097 -47623486 + GC_rich Low_complexity Low_complexity 1 26 0 30 45 0 0 chr2 205633136 205633180 -47623403 + GC_rich Low_complexity Low_complexity 1 44 0 208 235 12 24 chr2 205633346 205633431 -47623152 + (CCCCG)n Simple_repeat Simple_repeat 5 88 0 218 221 40 34 chr2 205633690 205633839 -47622744 + (CCG)n Simple_repeat Simple_repeat 2 151 0 31 0 0 0 chr2 205633856 205633887 -47622696 + GC_rich Low_complexity Low_complexity 1 31 0 186 133 0 0 chr2 205634218 205634248 -47622335 + (CA)n Simple_repeat Simple_repeat 2 31 0 293 212 91 20 chr2 205634509 205634608 -47621975 - L2 LINE L2 0 3313 3208 1519 234 21 40 chr2 205635478 205635905 -47620678 - MER20B DNA MER1_type 0 783 365 1583 316 70 35 chr2 205635915 205636224 -47620359 + HERVL LTR ERVL 1047 1344 -4310 2171 129 6 3 chr2 205636224 205636535 -47620048 + AluSx SINE Alu 1 312 0 1583 316 70 35 chr2 205636535 205637242 -47619341 + HERVL LTR ERVL 1344 2098 -3556 767 174 111 29 chr2 205637344 205637551 -47619032 + L1MC5 LINE L1 7661 7884 -77 2159 133 3 0 chr2 205637558 205637860 -47618723 - AluSx SINE Alu -9 303 1 484 264 72 18 chr2 205637907 205638074 -47618509 - AluJb SINE Alu -15 297 122 2285 104 0 22 chr2 205638208 205638526 -47618057 - AluSx SINE Alu -1 311 1 797 265 28 5 chr2 205638879 205639090 -47617493 + LTR16A LTR ERVL 156 371 -79 2382 90 0 0 chr2 205639113 205639412 -47617171 - AluY SINE Alu -12 299 1 2211 113 0 3 chr2 205639412 205639712 -47616871 - AluSq SINE Alu -13 300 1 885 126 0 22 chr2 205639735 205639870 -47616713 - FLAM_C SINE Alu 0 133 2 329 226 0 0 chr2 205639881 205639943 -47616640 + LTR16A LTR ERVL 389 450 0 297 0 0 0 chr2 205640220 205640253 -47616330 + (CA)n Simple_repeat Simple_repeat 2 34 0 787 161 0 0 chr2 205640284 205640402 -47616181 + FLAM_C SINE Alu 2 119 -14 34 24 0 0 chr2 205640405 205640446 -47616137 + AT_rich Low_complexity Low_complexity 1 41 0 2068 100 17 10 chr2 205640446 205640735 -47615848 - AluSq SINE Alu -18 295 5 31 0 0 0 chr2 205640743 205640774 -47615809 + AT_rich Low_complexity Low_complexity 1 31 0 2072 130 0 7 chr2 205641039 205641332 -47615251 - AluSx SINE Alu -21 291 1 1005 193 0 23 chr2 205641366 205641542 -47615041 + FAM SINE Alu 1 172 -3 2181 113 6 22 chr2 205641544 205641862 -47614721 + AluSq SINE Alu 1 313 0 182 310 90 0 chr2 205642174 205642274 -47614309 + L2 LINE L2 3104 3212 -60 2236 117 0 3 chr2 205642688 205642988 -47613595 - AluSq SINE Alu -14 299 1 229 59 0 59 chr2 205643000 205643066 -47613517 - AluSp/q SINE Alu 0 313 250 180 0 0 0 chr2 205643067 205643087 -47613496 + (ATTG)n Simple_repeat Simple_repeat 4 23 0 2307 81 3 0 chr2 205643134 205643418 -47613165 - AluSp SINE Alu -28 285 1 532 191 0 0 chr2 205643697 205643786 -47612797 - AluJ/FLAM SINE Alu -219 93 5 2392 99 0 10 chr2 205643822 205644135 -47612448 + AluSg SINE Alu 1 310 0 323 200 0 71 chr2 205644136 205644221 -47612362 + MER96B DNA MER1_type? 174 252 -165 1380 240 66 95 chr2 205644348 205644932 -47611651 + HERV16 LTR ERVL 1492 2069 -2927 1622 161 39 21 chr2 205644980 205645105 -47611478 + AluJo SINE Alu 14 135 -177 1509 151 121 15 chr2 205645105 205645370 -47611213 + AluSg1 SINE Alu 4 296 -13 1622 161 39 21 chr2 205645370 205645524 -47611059 + AluJo SINE Alu 135 298 -14 2002 185 49 66 chr2 205645569 205646082 -47610501 - MLT2B3 LTR ERVL -50 504 1 2268 97 7 3 chr2 205646084 205646383 -47610200 - AluSg SINE Alu -10 300 1 2150 53 11 35 chr2 205646698 205646983 -47609600 - AluY SINE Alu -7 304 27 910 187 14 23 chr2 205647284 205647503 -47609080 + L1MB4 LINE L1 5962 6178 -2 570 160 28 35 chr2 205647825 205647969 -47608614 + MER20B DNA MER1_type 582 724 -59 415 206 93 9 chr2 205648277 205648384 -47608199 + MER5A DNA MER1_type 74 189 0 360 0 0 0 chr2 205648408 205648448 -47608135 + (CA)n Simple_repeat Simple_repeat 1 40 0 1766 125 85 11 chr2 205648591 205648863 -47607720 + AluSc SINE Alu 1 292 -17 2170 93 7 10 chr2 205648979 205649270 -47607313 - AluSc SINE Alu -15 294 5 1344 136 14 14 chr2 205649603 205649817 -47606766 - AluSx SINE Alu -98 214 1 686 159 9 0 chr2 205649916 205650051 -47606532 - FLAM_C SINE Alu 0 141 6 901 144 8 0 chr2 205650114 205650246 -47606337 + AluJb SINE Alu 1 133 -179 1077 185 0 0 chr2 205650354 205650527 -47606056 + AluJb SINE Alu 126 298 -14 539 234 144 5 chr2 205650924 205651112 -47605471 - MIR SINE MIR -28 234 21 1311 156 212 34 chr2 205651159 205651480 -47605103 - LTR47A LTR ERVL -2 450 73 273 314 119 25 chr2 205651563 205651722 -47604861 + MLT1L LTR MaLR 218 391 -224 382 258 57 16 chr2 205651760 205651884 -47604699 + MLT1L LTR MaLR 466 594 -21 849 236 32 5 chr2 205651884 205652100 -47604483 - HAL1 LINE L1 -622 1885 1664 1372 77 33 11 chr2 205652100 205652281 -47604302 - AluSg/x SINE Alu -14 296 112 2349 97 3 6 chr2 205652449 205652760 -47603823 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr2 205652852 205652873 -47603710 + AT_rich Low_complexity Low_complexity 1 21 0 1099 173 0 0 chr2 205653477 205653656 -47602927 + AluJb SINE Alu 133 311 -1 1727 91 5 5 chr2 205655096 205655317 -47601266 - AluSx SINE Alu -91 221 1 2247 94 7 3 chr2 205655421 205655719 -47600864 - AluSp SINE Alu -13 300 2 578 121 0 30 chr2 205655928 205656027 -47600556 - AluSg/x SINE Alu -34 276 181 392 124 126 19 chr2 205656305 205656409 -47600174 + AluS SINE Alu 1 69 -232 219 204 56 0 chr2 205656417 205656471 -47600112 - MIR SINE MIR -155 107 51 1897 74 0 4 chr2 205656691 205656921 -47599662 - AluSq SINE Alu -84 229 1 1061 71 127 139 chr2 205657299 205657566 -47599017 - L1MA1 LINE L1 0 6302 6039 1915 101 65 7 chr2 205658665 205658943 -47597640 + AluSx SINE Alu 3 296 -16 423 270 86 13 chr2 205658957 205659109 -47597474 - L1MC4 LINE L1 -1124 6918 6756 2029 112 42 3 chr2 205659988 205660274 -47596309 + AluSq SINE Alu 5 301 -12 2274 109 3 0 chr2 205660553 205660855 -47595728 + AluSp SINE Alu 1 303 -10 183 80 0 0 chr2 205661662 205661687 -47594896 + (A)n Simple_repeat Simple_repeat 1 25 0 2257 113 0 0 chr2 205661793 205662093 -47594490 - AluSx SINE Alu -12 300 1 23 54 0 0 chr2 205662747 205662784 -47593799 + AT_rich Low_complexity Low_complexity 1 37 0 1455 152 12 113 chr2 205662788 205662978 -47593605 - AluJb SINE Alu 0 302 159 675 117 0 0 chr2 205662978 205663081 -47593502 + (TA)n Simple_repeat Simple_repeat 2 104 0 1455 152 12 113 chr2 205663081 205663226 -47593357 - AluJb SINE Alu -143 159 1 2199 115 13 3 chr2 205663672 205663976 -47592607 - AluSx SINE Alu -5 307 1 1285 62 119 6 chr2 205664011 205664041 -47592542 - MER107 DNA MER1_type 0 197 172 203 0 0 36 chr2 205664041 205664069 -47592514 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1285 62 119 6 chr2 205664069 205664214 -47592369 - MER107 DNA MER1_type -25 172 2 914 215 6 0 chr2 205664471 205664648 -47591935 + AluSg/x SINE Alu 122 299 -11 1564 195 7 20 chr2 205664705 205664871 -47591712 - AluJo SINE Alu -14 298 136 2390 92 7 0 chr2 205664871 205665177 -47591406 - AluSq SINE Alu -5 308 1 1564 195 7 20 chr2 205665177 205665312 -47591271 - AluJo SINE Alu -176 136 1 189 250 250 0 chr2 205666030 205666118 -47590465 + MIR SINE MIR 59 168 -94 1622 156 0 101 chr2 205666420 205666767 -47589816 + AluJo SINE Alu 1 312 0 252 0 0 0 chr2 205666894 205666922 -47589661 + (TTTTTA)n Simple_repeat Simple_repeat 2 29 0 1139 162 0 16 chr2 205666922 205667113 -47589470 - AluJo SINE Alu -120 192 5 2436 79 0 10 chr2 205667327 205667631 -47588952 - AluY SINE Alu -10 301 1 2142 105 25 0 chr2 205667927 205668212 -47588371 + AluSg SINE Alu 1 292 -18 861 210 0 6 chr2 205668220 205668387 -47588196 + FRAM SINE Alu 1 166 0 2306 69 3 33 chr2 205668403 205668706 -47587877 + AluY SINE Alu 1 294 -17 638 212 80 26 chr2 205668742 205668968 -47587615 + L1MC5 LINE L1 7687 7924 -37 844 93 0 0 chr2 205669184 205669291 -47587292 - U6 snRNA snRNA 0 107 1 2329 73 24 0 chr2 205669452 205669740 -47586843 - AluSp SINE Alu -13 300 6 746 173 8 0 chr2 205669763 205669890 -47586693 + FLAM_C SINE Alu 5 132 -1 1897 168 10 0 chr2 205670186 205670489 -47586094 + AluJb SINE Alu 1 306 -6 2291 100 3 7 chr2 205670492 205670802 -47585781 + AluSg1 SINE Alu 1 309 0 2659 176 38 36 chr2 205670887 205671438 -47585145 - MER68 LTR ERV1 -10 552 1 658 249 44 83 chr2 205671440 205671669 -47584914 - LTR50 LTR ERVL -189 606 387 225 317 89 20 chr2 205671723 205671824 -47584759 - MIR SINE MIR -78 130 23 2324 95 0 3 chr2 205671911 205672206 -47584377 + AluSc SINE Alu 1 294 -15 2204 109 0 0 chr2 205672215 205672498 -47584085 + AluSx SINE Alu 1 283 -29 197 175 140 18 chr2 205673104 205673161 -47583422 - MIR SINE MIR -115 93 30 1732 164 17 7 chr2 205673197 205673489 -47583094 + AluJo SINE Alu 3 297 -15 1262 135 0 5 chr2 205674166 205674351 -47582232 + AluSg1 SINE Alu 1 184 -125 2153 71 96 0 chr2 205674795 205675077 -47581506 - AluY SINE Alu -2 309 1 1581 148 23 61 chr2 205675474 205675784 -47580799 + AluJo SINE Alu 1 298 -14 2117 121 3 0 chr2 205675818 205676107 -47580476 - AluSx SINE Alu -22 290 1 216 0 0 0 chr2 205676199 205676223 -47580360 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 481 155 68 10 chr2 205676238 205676341 -47580242 + AluY SINE Alu 200 308 -3 2256 107 10 0 chr2 205676347 205676637 -47579946 + AluSg SINE Alu 1 293 -17 238 203 0 0 chr2 205677639 205677703 -47578880 + L1MC4 LINE L1 6640 6703 -1339 363 44 0 0 chr2 205677704 205677749 -47578834 + (TG)n Simple_repeat Simple_repeat 2 46 0 297 0 0 0 chr2 205677748 205677781 -47578802 + (TA)n Simple_repeat Simple_repeat 2 34 0 * 2261 116 3 7 chr2 205677781 205678091 -47578492 - AluSq SINE Alu 0 313 5 527 195 0 18 chr2 205678106 205678219 -47578364 - AluJb SINE Alu 0 312 202 2275 85 3 7 chr2 205678253 205678548 -47578035 - AluSg SINE Alu -10 300 7 22 0 0 0 chr2 205679208 205679230 -47577353 + AT_rich Low_complexity Low_complexity 1 22 0 2333 101 0 0 chr2 205679460 205679758 -47576825 - AluY SINE Alu -13 298 1 1828 132 53 0 chr2 205679811 205680076 -47576507 + AluSx SINE Alu 1 279 -33 342 0 0 0 chr2 205680080 205680118 -47576465 + (TC)n Simple_repeat Simple_repeat 2 39 0 324 0 0 0 chr2 205680150 205680186 -47576397 + (CA)n Simple_repeat Simple_repeat 1 36 0 312 260 213 12 chr2 205680428 205680597 -47575986 + MLT1J2 LTR MaLR 248 450 0 977 203 60 0 chr2 205680835 205681017 -47575566 + MER58A DNA MER1_type 26 218 -6 1947 129 73 0 chr2 205681255 205681541 -47575042 + AluSg SINE Alu 1 307 -3 1730 177 7 7 chr2 205682281 205682591 -47573992 + AluJo SINE Alu 2 311 -1 2321 116 0 3 chr2 205682766 205683077 -47573506 + AluSg SINE Alu 1 310 0 384 266 73 9 chr2 205683158 205683267 -47573316 - L2 LINE L2 -14 3299 3184 219 188 0 0 chr2 205683505 205683553 -47573030 + (TA)n Simple_repeat Simple_repeat 1 48 0 483 104 26 0 chr2 205683562 205683639 -47572944 + Alu SINE Alu 231 309 0 2343 91 0 7 chr2 205683824 205684122 -47572461 + AluSx SINE Alu 1 296 -16 1126 132 35 7 chr2 205684276 205684488 -47572095 - L1MA5A LINE L1 -15 6276 6065 2143 111 49 31 chr2 205684488 205684812 -47571771 + MER1B DNA MER1_type 4 333 -6 590 155 9 9 chr2 205684820 205684936 -47571647 - L1MA5A LINE L1 -216 6081 5966 1728 120 27 103 chr2 205685124 205685260 -47571323 - L1MA5A LINE L1 -216 6081 5936 2304 70 3 7 chr2 205685260 205685547 -47571036 - AluY SINE Alu -24 287 2 2340 76 3 3 chr2 205685556 205685847 -47570736 - AluSc SINE Alu -18 291 1 1728 120 27 103 chr2 205685847 205686042 -47570541 - L1MA5A LINE L1 -369 5928 5720 1601 206 6 3 chr2 205686042 205686353 -47570230 - AluJo SINE Alu 0 312 1 1377 157 18 136 chr2 205686353 205686685 -47569898 - AluJb SINE Alu -7 295 3 1728 120 27 103 chr2 205686685 205686749 -47569834 - L1MA5A LINE L1 -575 5722 5705 192 272 54 43 chr2 205689259 205689351 -47567232 + MIR SINE MIR 100 192 -70 898 247 107 51 chr2 205689383 205689659 -47566924 - L2 LINE L2 -45 3268 3009 2704 26 7 3 chr2 205689659 205689969 -47566614 + AluY SINE Alu 1 311 0 898 247 107 51 chr2 205689969 205690255 -47566328 - L2 LINE L2 -304 3009 2678 4427 124 20 26 chr2 205690440 205691132 -47565451 - LTR12 LTR ERV1 0 688 1 797 233 61 47 chr2 205691209 205691505 -47565078 - pTR5 LTR ERV1 -1410 1028 729 1853 152 13 20 chr2 205691556 205691858 -47564725 + AluJo SINE Alu 1 300 -12 430 234 147 36 chr2 205691858 205692110 -47564473 + L1MC5 LINE L1 7377 7656 -305 315 282 9 9 chr2 205692252 205692362 -47564221 - AluSq/x SINE Alu -192 110 1 995 16 8 0 chr2 205692437 205692558 -47564025 + (TC)n Simple_repeat Simple_repeat 1 122 0 359 201 97 39 chr2 205693438 205693592 -47562991 - MIR SINE MIR -50 212 50 1602 192 0 35 chr2 205693705 205694017 -47562566 + AluJo SINE Alu 1 301 -11 211 354 12 0 chr2 205694040 205694122 -47562461 + MIR SINE MIR 12 94 -168 252 333 68 0 chr2 205694207 205694339 -47562244 + MIR SINE MIR 90 230 -32 1890 163 0 23 chr2 205694920 205695227 -47561356 + AluJb SINE Alu 1 300 -12 2158 117 7 0 chr2 205695239 205695538 -47561045 + AluSq SINE Alu 1 301 -12 1688 119 8 0 chr2 205696301 205696537 -47560046 - AluSx SINE Alu -74 238 1 24 0 0 0 chr2 205696541 205696565 -47560018 + AT_rich Low_complexity Low_complexity 1 24 0 194 301 41 41 chr2 205697450 205697573 -47559010 - L2 LINE L2 -264 3008 2886 273 159 0 0 chr2 205698436 205698499 -47558084 + (CAT)n Simple_repeat Simple_repeat 3 65 0 2471 61 0 23 chr2 205698738 205699048 -47557535 - AluY SINE Alu 0 311 9 1850 139 7 14 chr2 205699443 205699731 -47556852 + AluJb SINE Alu 1 286 -26 2522 57 0 10 chr2 205700563 205700860 -47555723 + AluY SINE Alu 3 296 -15 375 268 18 9 chr2 205700948 205701060 -47555523 + MIR SINE MIR 104 216 -46 2002 158 0 0 chr2 205701273 205701570 -47555013 + AluJb SINE Alu 2 298 -14 1600 184 14 14 chr2 205701591 205701879 -47554704 + AluJo SINE Alu 1 288 -24 3023 112 7 9 chr2 205702719 205703148 -47553435 + MSTA LTR MaLR 1 428 0 219 319 25 34 chr2 205703187 205703306 -47553277 - L2 LINE L2 0 3313 3196 260 214 18 0 chr2 205703590 205703646 -47552937 + L2 LINE L2 3216 3272 0 886 148 0 8 chr2 205703790 205703918 -47552665 + FLAM_C SINE Alu 1 127 -16 1895 153 0 19 chr2 205703922 205704230 -47552353 + AluJb SINE Alu 1 302 -10 2177 119 0 7 chr2 205704421 205704714 -47551869 - AluSx SINE Alu -21 291 1 758 164 0 16 chr2 205705013 205705135 -47551448 + FLAM_C SINE Alu 2 121 -22 868 210 80 29 chr2 205705172 205705410 -47551173 - MIR SINE MIR -11 251 2 225 305 158 12 chr2 205705847 205705903 -47550680 - MER5A DNA MER1_type -1 188 142 2239 92 13 10 chr2 205705903 205706206 -47550377 - AluSp SINE Alu -9 304 1 225 305 158 12 chr2 205706206 205706313 -47550270 - MER5A DNA MER1_type -47 142 1 1257 178 5 9 chr2 205707709 205707928 -47548655 + MER20 DNA MER1_type 1 218 -1 2406 48 24 0 chr2 205709012 205709302 -47547281 - AluY SINE Alu -14 297 1 264 349 61 15 chr2 205709721 205709853 -47546730 + L2 LINE L2 3125 3262 -10 1397 60 0 11 chr2 205711158 205711342 -47545241 + L1PA8 LINE L1 5990 6171 -1 2351 92 0 3 chr2 205711857 205712152 -47544431 - AluSc SINE Alu -15 294 1 2218 117 0 3 chr2 205712439 205712739 -47543844 + AluSq SINE Alu 1 299 -14 668 130 0 37 chr2 205712742 205712850 -47543733 - FLAM_C SINE Alu -2 141 38 2125 113 3 0 chr2 205713162 205713453 -47543130 + AluY SINE Alu 1 292 -19 703 105 0 129 chr2 205715707 205715831 -47540752 - FRAM SINE Alu -12 164 57 2123 126 0 3 chr2 205716052 205716353 -47540230 + AluSx SINE Alu 1 300 -12 21 36 0 0 chr2 205716476 205716504 -47540079 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 205718974 205718996 -47537587 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr2 205720137 205720161 -47536422 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr2 205720428 205720450 -47536133 + AT_rich Low_complexity Low_complexity 1 22 0 769 175 8 8 chr2 205720951 205721077 -47535506 + FLAM_A SINE Alu 14 139 -3 598 115 0 0 chr2 205722831 205722909 -47533674 + AluJ/FLAM SINE Alu 1 78 -234 29 20 0 39 chr2 205722909 205722933 -47533650 + AT_rich Low_complexity Low_complexity 1 24 -25 2024 130 11 3 chr2 205722933 205723218 -47533365 + AluSx SINE Alu 1 287 -25 29 20 0 39 chr2 205723218 205723244 -47533339 + AT_rich Low_complexity Low_complexity 24 49 0 197 279 73 29 chr2 205723253 205723321 -47533262 - L3b LINE CR1 -220 1363 1293 24 32 0 0 chr2 205723499 205723530 -47533053 + AT_rich Low_complexity Low_complexity 1 31 0 739 108 117 33 chr2 205723534 205723654 -47532929 + AluJb SINE Alu 2 131 -181 22 0 0 0 chr2 205723654 205723676 -47532907 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr2 205724385 205724415 -47532168 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr2 205724509 205724537 -47532046 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr2 205724714 205724737 -47531846 + AT_rich Low_complexity Low_complexity 1 23 0 686 103 0 0 chr2 205724789 205724876 -47531707 + FLAM_C SINE Alu 32 118 -25 24 53 0 0 chr2 205724876 205724914 -47531669 + AT_rich Low_complexity Low_complexity 1 38 0 1792 155 16 7 chr2 205725445 205725749 -47530834 + AluJo SINE Alu 1 307 -5 1576 137 4 0 chr2 205725959 205726185 -47530398 + AluSq SINE Alu 1 227 -86 1559 142 0 0 chr2 205727389 205727614 -47528969 + AluSg/x SINE Alu 77 301 -11 1092 190 62 44 chr2 205727662 205727790 -47528793 + AluJo SINE Alu 1 136 -176 2284 92 3 3 chr2 205727790 205728085 -47528498 + AluSp SINE Alu 1 295 -18 1092 190 62 44 chr2 205728085 205728182 -47528401 + AluJo SINE Alu 136 230 -82 2371 89 0 0 chr2 205729174 205729476 -47527107 - AluSg SINE Alu -8 302 1 1246 157 9 23 chr2 205729613 205729829 -47526754 - AluJb SINE Alu -14 298 86 2339 74 10 7 chr2 205730064 205730363 -47526220 + AluY SINE Alu 1 300 -11 2120 99 3 3 chr2 205730667 205730970 -47525613 - AluSx SINE Alu 0 303 1 1804 151 51 3 chr2 205731019 205731311 -47525272 + AluSx SINE Alu 2 307 -5 2008 137 0 17 chr2 205731434 205731726 -47524857 + AluSx SINE Alu 1 287 -25 23 0 0 0 chr2 205731726 205731749 -47524834 + AT_rich Low_complexity Low_complexity 1 23 0 1496 290 86 67 chr2 205731930 205732114 -47524469 - L2 LINE L2 -691 2623 2444 2146 117 3 3 chr2 205732114 205732423 -47524160 - AluSx SINE Alu -3 309 1 1496 290 86 67 chr2 205732423 205733049 -47523534 - L2 LINE L2 -870 2444 1788 1784 168 7 3 chr2 205733049 205733340 -47523243 + AluJo SINE Alu 12 303 -9 1496 290 86 67 chr2 205733340 205733518 -47523065 - L2 LINE L2 -1526 1788 1615 2123 130 0 10 chr2 205733570 205733869 -47522714 - AluSg SINE Alu -14 296 1 1638 151 6 61 chr2 205734122 205734433 -47522150 - AluJo SINE Alu -18 294 1 1757 157 115 28 chr2 205734644 205735000 -47521583 + MLT1B LTR MaLR 4 390 0 22 35 0 0 chr2 205735603 205735632 -47520951 + AT_rich Low_complexity Low_complexity 1 29 0 1844 138 3 60 chr2 205735771 205736089 -47520494 + AluSx SINE Alu 1 300 -12 2259 125 3 0 chr2 205736269 205736580 -47520003 + AluSx SINE Alu 1 312 0 622 278 0 0 chr2 205739084 205739210 -47517373 + FLAM_A SINE Alu 1 126 -7 24 0 0 0 chr2 205739850 205739874 -47516709 + AT_rich Low_complexity Low_complexity 1 24 0 409 143 57 14 chr2 205739942 205740012 -47516571 + AluJo/FLAM SINE Alu 38 110 -202 1800 166 7 10 chr2 205740012 205740307 -47516276 + AluJb SINE Alu 1 294 -18 26 0 0 0 chr2 205740338 205740364 -47516219 + AT_rich Low_complexity Low_complexity 1 26 0 1957 81 16 0 chr2 205740634 205740880 -47515703 + L1PA5 LINE L1 5905 6154 0 26 0 0 0 chr2 205740900 205740926 -47515657 + AT_rich Low_complexity Low_complexity 1 26 0 2202 85 28 0 chr2 205740926 205741209 -47515374 + AluY SINE Alu 3 293 -18 2038 105 58 0 chr2 205741420 205741715 -47514868 + AluSx SINE Alu 1 312 0 364 167 17 0 chr2 205742474 205742534 -47514049 + AluS SINE Alu 1 61 -242 1946 120 34 10 chr2 205742534 205742826 -47513757 + AluSx SINE Alu 3 301 -11 326 254 88 55 chr2 205742831 205743012 -47513571 - L1MC4 LINE L1 -284 7758 7572 1811 121 18 7 chr2 205743193 205743466 -47513117 + AluSx SINE Alu 1 276 -36 186 43 0 0 chr2 205743471 205743494 -47513089 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2348 77 0 0 chr2 205743499 205743820 -47512763 + AluSq SINE Alu 1 321 0 1646 178 20 7 chr2 205744036 205744334 -47512249 + AluJb SINE Alu 4 305 -7 1272 101 0 0 chr2 205744608 205744776 -47511807 - AluSq SINE Alu -10 303 136 237 311 38 61 chr2 205744939 205745071 -47511512 + MER5A DNA MER1_type 26 154 -35 2242 89 0 0 chr2 205746054 205746334 -47510249 + AluSg1 SINE Alu 1 280 -29 270 0 0 0 chr2 205746334 205746364 -47510219 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 1350 181 11 39 chr2 205746380 205746640 -47509943 + AluJb SINE Alu 34 286 -26 1987 126 0 4 chr2 205746927 205747197 -47509386 + AluSq SINE Alu 1 269 -44 753 121 0 0 chr2 205747197 205747296 -47509287 + AluSg/x SINE Alu 192 290 -20 763 209 90 0 chr2 205747629 205747806 -47508777 - L1MD1 LINE L1 -391 5851 5659 2392 84 3 0 chr2 205747818 205748116 -47508467 + AluSx SINE Alu 1 299 -13 402 224 72 16 chr2 205748290 205748415 -47508168 + L1MC5 LINE L1 7414 7545 -416 1844 156 13 7 chr2 205748800 205749101 -47507482 + AluJo SINE Alu 1 303 -9 2002 145 13 0 chr2 205749547 205749850 -47506733 + AluSx SINE Alu 4 310 -2 224 307 140 20 chr2 205750655 205750805 -47505778 + L2 LINE L2 2806 2973 -299 752 77 7 136 chr2 205752274 205752429 -47504154 + FRAM SINE Alu 22 156 -20 198 254 51 51 chr2 205752453 205752512 -47504071 - L3 LINE CR1 -15 1562 1504 480 224 19 9 chr2 205753220 205753327 -47503256 - FLAM_A SINE Alu -27 115 8 2205 121 0 0 chr2 205753358 205753804 -47502779 - AluSx SINE Alu 0 446 1 1579 174 22 117 chr2 205753917 205753989 -47502594 - MLT1A1 LTR MaLR 0 365 288 2397 102 0 0 chr2 205753989 205754293 -47502290 + AluSq SINE Alu 1 304 -9 1579 174 22 117 chr2 205754293 205754623 -47501960 - MLT1A1 LTR MaLR -77 288 1 2272 132 11 52 chr2 205754818 205754896 -47501687 + MER7A DNA MER2_type 1 81 -2957 2371 85 0 0 chr2 205754896 205755191 -47501392 + AluSc SINE Alu 1 295 -14 2272 132 11 52 chr2 205755191 205755475 -47501108 + MER7A DNA MER2_type 81 346 0 624 260 45 45 chr2 205755745 205755945 -47500638 + MLT1L LTR MaLR 201 400 -215 407 260 62 60 chr2 205756504 205756849 -47499734 + MLT1K LTR MaLR 203 580 -8 2332 96 0 7 chr2 205756863 205757164 -47499419 + AluSx SINE Alu 1 299 -13 2243 95 6 44 chr2 205757178 205757321 -47499262 + AluSx SINE Alu 1 148 -164 198 0 0 0 chr2 205757321 205757343 -47499240 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 2243 95 6 44 chr2 205757343 205757515 -47499068 + AluSx SINE Alu 148 304 -8 1302 156 60 135 chr2 205757776 205758155 -47498428 - MLT1A1 LTR MaLR 0 365 45 2223 112 0 3 chr2 205758155 205758459 -47498124 - AluSx SINE Alu -9 303 1 1302 156 60 135 chr2 205758459 205758501 -47498082 - MLT1A1 LTR MaLR -320 45 1 683 157 13 101 chr2 205759290 205759449 -47497134 + FRAM SINE Alu 20 164 -12 1755 92 21 0 chr2 205759461 205759700 -47496883 + AluSp SINE Alu 66 309 -4 2119 130 0 0 chr2 205759826 205760118 -47496465 + AluSx SINE Alu 1 292 -20 1560 165 89 17 chr2 205760191 205760482 -47496101 - AluJb SINE Alu 0 312 1 984 198 57 82 chr2 205760487 205760660 -47495923 + L1MC5 LINE L1 7516 7692 -269 2215 120 0 0 chr2 205760660 205760961 -47495622 - AluSx SINE Alu -9 303 3 984 198 57 82 chr2 205760961 205761191 -47495392 + L1MC5 LINE L1 7692 7909 -52 198 305 180 17 chr2 205761332 205761565 -47495018 + L2 LINE L2 2140 2410 -904 2285 117 3 0 chr2 205761897 205762206 -47494377 + AluSp SINE Alu 3 312 -1 320 285 141 29 chr2 205762319 205762350 -47494233 - L1MA6 LINE L1 -337 5963 5933 677 253 251 32 chr2 205762350 205763127 -47493456 - L1ME3 LINE L1 -225 5937 5369 1836 164 3 16 chr2 205762743 205763054 -47493529 - AluJb SINE Alu -5 307 1 274 289 22 78 chr2 205763054 205763160 -47493423 - L1PA8A LINE L1 -705 5426 5333 509 160 50 0 chr2 205763184 205763284 -47493299 - L1MB3 LINE L1 0 6183 6079 843 214 34 63 chr2 205763328 205763566 -47493017 + MER112 DNA MER1_type 29 259 -1 1610 251 69 74 chr2 205763566 205763838 -47492745 - L1ME3 LINE L1 -832 5314 5042 2249 108 3 3 chr2 205763838 205764135 -47492448 - AluSx SINE Alu -15 297 1 1610 251 69 74 chr2 205764135 205764372 -47492211 - L1ME3 LINE L1 -1104 5042 4805 2367 112 24 27 chr2 205764372 205764748 -47491835 + THE1C LTR MaLR 1 375 0 1610 251 69 74 chr2 205764748 205765048 -47491535 - L1ME3 LINE L1 -1341 4805 4507 2032 152 7 0 chr2 205765048 205765358 -47491225 - AluSx SINE Alu 0 312 1 1610 251 69 74 chr2 205765358 205765504 -47491079 - L1ME3 LINE L1 -1639 4507 4362 1005 197 81 25 chr2 205765607 205765805 -47490778 + MER58A DNA MER1_type 1 209 -15 726 298 51 47 chr2 205765821 205766040 -47490543 - L1ME3 LINE L1 -1803 4343 4126 2203 115 0 32 chr2 205766040 205766353 -47490230 + AluSq SINE Alu 1 303 -10 726 298 51 47 chr2 205766353 205766623 -47489960 - L1ME3 LINE L1 -2020 4126 3852 2270 119 0 0 chr2 205768417 205768710 -47487873 + AluSx SINE Alu 1 293 -19 1200 191 42 83 chr2 205768803 205769139 -47487444 - MLT1A1 LTR MaLR -43 322 1 193 323 85 39 chr2 205769376 205769506 -47487077 - L2 LINE L2 -1 3271 3136 275 192 0 0 chr2 205769620 205769672 -47486911 + L2 LINE L2 3209 3260 -12 2537 66 0 0 chr2 205769687 205769991 -47486592 - AluY SINE Alu -7 304 1 1907 115 3 51 chr2 205770092 205770410 -47486173 + AluSx SINE Alu 1 304 0 24 32 0 0 chr2 205771041 205771072 -47485511 + AT_rich Low_complexity Low_complexity 1 31 0 313 310 91 118 chr2 205771587 205771951 -47484632 - L2 LINE L2 -3 3269 2916 372 265 59 0 chr2 205772002 205772104 -47484479 - MER91C DNA MER1_type 0 140 33 338 296 167 36 chr2 205772184 205772633 -47483950 - L2 LINE L2 -547 2767 2260 2261 118 0 3 chr2 205772840 205773146 -47483437 + AluSx SINE Alu 1 305 -7 1978 145 37 0 chr2 205773530 205773826 -47482757 - AluJb SINE Alu -5 307 1 266 128 21 0 chr2 205774317 205774364 -47482219 + HsTC2 DNA Tc2 1 48 -1850 319 233 0 0 chr2 205774370 205774443 -47482140 - MIR SINE MIR -1 261 189 191 283 0 0 chr2 205774466 205774519 -47482064 - MIR SINE MIR -22 240 188 1292 293 38 14 chr2 205775005 205775422 -47481161 - LTR16A LTR ERVL -7 443 17 207 317 19 0 chr2 205775447 205775470 -47481113 + (TA)n Simple_repeat Simple_repeat 1 22 -84 2580 115 3 8 chr2 205775470 205775836 -47480747 + THE1B LTR MaLR 1 364 0 207 317 19 0 chr2 205775836 205775916 -47480667 + (TA)n Simple_repeat Simple_repeat 22 106 0 769 228 228 8 chr2 205776029 205776288 -47480295 + MER20B DNA MER1_type 20 335 -448 691 154 108 108 chr2 205776296 205776341 -47480242 - LTR50 LTR ERVL -1 794 750 2181 115 3 0 chr2 205776341 205776628 -47479955 - AluSx SINE Alu -24 288 1 691 154 108 108 chr2 205776628 205776655 -47479928 - LTR50 LTR ERVL -45 750 724 3388 101 50 14 chr2 205776655 205777117 -47479466 + MER75 DNA T2_type 2 485 -29 2028 127 0 77 chr2 205777117 205777456 -47479127 - AluSq SINE Alu 0 313 1 3388 101 50 14 chr2 205777456 205777488 -47479095 + MER75 DNA T2_type 485 514 0 691 154 108 108 chr2 205777488 205777673 -47478910 - LTR50 LTR ERVL -70 725 536 368 252 37 19 chr2 205777685 205777792 -47478791 - MERVL LTR ERVL -285 5200 5092 287 301 0 0 chr2 205777848 205777931 -47478652 - MERVL LTR ERVL -660 5104 5022 2463 285 84 34 chr2 205778170 205778532 -47478051 - MERVL LTR ERVL -955 4809 4467 2136 125 3 3 chr2 205778532 205778829 -47477754 + AluSx SINE Alu 1 297 -15 2463 285 84 34 chr2 205778829 205778854 -47477729 - MERVL LTR ERVL -1297 4467 4445 2014 164 3 0 chr2 205778854 205779164 -47477419 + AluSx SINE Alu 1 311 -1 2463 285 84 34 chr2 205779164 205781094 -47475489 - MERVL LTR ERVL -1319 4445 2276 270 205 55 39 chr2 205781297 205781424 -47475159 + HAL1b LINE L1 1023 1151 -197 1123 153 50 39 chr2 205781681 205781787 -47474796 + L1MA8 LINE L1 5979 6082 -209 1785 87 136 0 chr2 205781787 205782052 -47474531 + AluY SINE Alu 1 301 0 1123 153 50 39 chr2 205782052 205782188 -47474395 + L1MA8 LINE L1 6082 6208 -83 1614 171 60 0 chr2 205782193 205782474 -47474109 - AluJb SINE Alu -14 298 1 207 0 0 0 chr2 205782491 205782514 -47474069 + (CA)n Simple_repeat Simple_repeat 2 24 0 904 316 33 31 chr2 205782553 205783008 -47473575 - LTR16B LTR ERVL -34 430 1 2007 152 0 3 chr2 205783047 205783344 -47473239 + AluSx SINE Alu 1 296 -16 313 369 99 24 chr2 205783531 205783783 -47472800 + L1ME LINE L1 5293 5563 -558 1658 147 11 23 chr2 205783818 205784083 -47472500 + AluJb SINE Alu 6 267 -45 317 163 104 96 chr2 205784118 205784253 -47472330 - MLT1K LTR MaLR -4 584 449 210 147 0 0 chr2 205784286 205784320 -47472263 + (CA)n Simple_repeat Simple_repeat 1 34 0 2146 126 3 3 chr2 205784464 205784758 -47471825 + AluJb SINE Alu 1 294 -18 355 243 9 28 chr2 205785703 205785810 -47470773 + LTR16C LTR ERVL 385 489 -2 1796 119 36 29 chr2 205786499 205786776 -47469807 + AluJo SINE Alu 7 285 -27 297 0 0 0 chr2 205786776 205786809 -47469774 + (GA)n Simple_repeat Simple_repeat 2 34 0 1991 133 28 0 chr2 205787283 205787568 -47469015 + AluSx SINE Alu 1 293 -19 2404 162 48 11 chr2 205787750 205788189 -47468394 + MSTB2 LTR MaLR 3 457 0 1537 228 8 16 chr2 205788327 205788691 -47467892 + MLT1A1 LTR MaLR 5 365 0 2168 97 42 0 chr2 205788961 205789249 -47467334 + AluY SINE Alu 1 300 -11 295 335 71 48 chr2 205789423 205789733 -47466850 - L2 LINE L2 -8 3305 2979 2040 121 16 32 chr2 205789733 205790048 -47466535 + AluSx SINE Alu 1 310 -2 295 335 71 48 chr2 205790048 205790200 -47466383 - L2 LINE L2 -334 2979 2832 238 269 55 59 chr2 205790711 205790920 -47465663 + L1M4 LINE L1 3176 3385 -2761 2013 162 3 60 chr2 205790920 205790984 -47465599 + MLT1A1 LTR MaLR 5 71 -294 2328 77 0 10 chr2 205790984 205791283 -47465300 + AluSq SINE Alu 1 296 -17 2013 162 3 60 chr2 205791283 205791601 -47464982 + MLT1A1 LTR MaLR 71 365 0 238 269 55 59 chr2 205791601 205791662 -47464921 + L1M4 LINE L1 3385 3445 -2701 223 164 30 15 chr2 205792784 205792851 -47463732 + (TATAA)n Simple_repeat Simple_repeat 2 69 0 2124 177 103 12 chr2 205793089 205793508 -47463075 + LTR32 LTR ERVL 15 471 0 2344 94 3 7 chr2 205793928 205794264 -47462319 + AluSg SINE Alu 1 335 0 848 155 68 0 chr2 205794271 205794419 -47462164 + FRAM SINE Alu 11 168 -8 2138 110 0 29 chr2 205794419 205794728 -47461855 + AluSx SINE Alu 1 300 -12 1680 184 48 12 chr2 205794847 205795178 -47461405 - THE1B LTR MaLR -3 361 19 2470 93 3 0 chr2 205795978 205796289 -47460294 - AluSx SINE Alu 0 312 1 1888 168 0 13 chr2 205796414 205796717 -47459866 + AluJb SINE Alu 1 299 -13 857 235 123 8 chr2 205796777 205797037 -47459546 - LTR16A1 LTR ERVL 0 457 168 346 350 0 8 chr2 205797295 205797415 -47459168 + MIR SINE MIR 23 141 -121 2106 238 73 30 chr2 205797487 205798121 -47458462 + HsTC2c DNA Tc2 65 725 -4 2261 154 95 0 chr2 205798420 205798809 -47457774 - MSTB LTR MaLR 0 426 1 368 297 67 42 chr2 205799065 205799101 -47457482 + MIR SINE MIR 4 38 -224 1941 150 0 7 chr2 205799101 205799395 -47457188 + AluSx SINE Alu 3 294 -18 368 297 67 42 chr2 205799395 205799597 -47456986 + MIR SINE MIR 38 248 -14 628 279 143 31 chr2 205800133 205800552 -47456031 - L1ME LINE L1 -385 5736 5271 852 187 45 0 chr2 205800579 205800734 -47455849 + FRAM SINE Alu 1 162 -14 693 163 111 0 chr2 205800810 205800945 -47455638 + MLT1A1 LTR MaLR 1 150 -215 1857 149 0 4 chr2 205800950 205801226 -47455357 - AluJb SINE Alu -37 275 1 224 173 99 25 chr2 205801353 205801556 -47455027 + (TTAA)n Simple_repeat Simple_repeat 1 218 0 253 294 76 0 chr2 205801653 205801745 -47454838 - MIR3 SINE MIR -11 197 99 384 267 67 12 chr2 205801760 205801925 -47454658 - L1ME4a LINE L1 -188 5933 5760 2382 82 10 13 chr2 205802064 205802367 -47454216 + AluSx SINE Alu 1 302 -10 631 154 0 55 chr2 205802454 205802588 -47453995 + FLAM_C SINE Alu 20 147 0 564 277 131 77 chr2 205802695 205803161 -47453422 - L3 LINE CR1 -1 1576 1086 2088 120 0 21 chr2 205803241 205803532 -47453051 + AluSg SINE Alu 11 295 -15 333 155 0 0 chr2 205803893 205803951 -47452632 + (TG)n Simple_repeat Simple_repeat 2 59 0 1998 177 151 61 chr2 205804005 205804421 -47452162 + MER92B LTR ERV1 5 487 -149 2461 83 0 0 chr2 205804421 205804722 -47451861 + AluSc SINE Alu 1 301 -8 1998 177 151 61 chr2 205804722 205804876 -47451707 + MER92B LTR ERV1 487 626 -10 1540 189 14 28 chr2 205804952 205805238 -47451345 - AluJo SINE Alu -30 282 1 253 361 58 21 chr2 205805377 205805568 -47451015 - L3 LINE CR1 -794 783 586 295 165 13 13 chr2 205805814 205805827 -47450756 + GA-rich Low_complexity Low_complexity 2 14 -66 2328 122 0 0 chr2 205805827 205806139 -47450444 + AluSx SINE Alu 1 312 0 1841 167 14 3 chr2 205806144 205806438 -47450145 + AluJo SINE Alu 1 297 -15 295 165 13 13 chr2 205806438 205806497 -47450086 + GA-rich Low_complexity Low_complexity 17 80 0 862 261 77 88 chr2 205806572 205806788 -47449795 - L2 LINE L2 0 3313 3096 2173 82 10 27 chr2 205806788 205807082 -47449501 + AluSx SINE Alu 1 289 -23 862 261 77 88 chr2 205807082 205807097 -47449486 - L2 LINE L2 -217 3096 3082 180 0 0 0 chr2 205807097 205807117 -47449466 + (TAA)n Simple_repeat Simple_repeat 2 21 0 862 261 77 88 chr2 205807117 205807561 -47449022 - L2 LINE L2 -231 3082 2650 337 241 28 85 chr2 205808168 205808309 -47448274 + MLT1L LTR MaLR 132 264 -351 3106 129 33 4 chr2 205808751 205809238 -47447345 - MER50 LTR ERV1 -34 700 200 4480 122 107 76 chr2 205809238 205810584 -47445999 + pTR5 LTR ERV1 750 2426 -12 1146 175 27 18 chr2 205810584 205810807 -47445776 - MER50 LTR ERV1 -509 225 1 314 221 58 0 chr2 205810819 205810905 -47445678 + MLT1L LTR MaLR 507 597 -18 1936 131 28 3 chr2 205810908 205811199 -47445384 - AluSx SINE Alu -14 298 1 294 294 92 33 chr2 205811533 205811686 -47444897 + MIR3 SINE MIR 23 184 -24 988 152 50 35 chr2 205811760 205811958 -47444625 - AluJo SINE Alu -8 304 104 2262 114 3 0 chr2 205812182 205812480 -47444103 - AluSx SINE Alu -9 303 5 2103 109 0 3 chr2 205812510 205812793 -47443790 - AluSx SINE Alu -30 282 1 827 213 30 0 chr2 206013001 206013170 -47243413 + MIR SINE MIR 2 175 -87 191 269 239 0 chr2 206013819 206013886 -47242697 + MIR SINE MIR 3 85 -177 476 53 27 13 chr2 206014016 206014091 -47242492 - L1PB1 LINE L1 -120 6031 5956 279 0 0 0 chr2 206014157 206014188 -47242395 + (TA)n Simple_repeat Simple_repeat 1 31 0 189 0 0 0 chr2 206014188 206014209 -47242374 + (T)n Simple_repeat Simple_repeat 1 21 0 241 235 109 67 chr2 206014571 206014690 -47241893 - MER5B DNA MER1_type -54 124 1 455 280 67 33 chr2 206015199 206015349 -47241234 - MIR SINE MIR -85 177 23 315 287 0 11 chr2 206016152 206016239 -47240344 - L2 LINE L2 0 3272 3187 662 239 95 29 chr2 206016649 206016870 -47239713 - MIR SINE MIR 0 262 22 413 222 50 10 chr2 206017518 206017617 -47238966 + L2 LINE L2 3211 3313 0 545 285 263 5 chr2 206017650 206018053 -47238530 + L2 LINE L2 2249 2755 -559 2058 111 0 7 chr2 206018483 206018781 -47237802 - AluSc SINE Alu -13 296 1 264 278 132 58 chr2 206019624 206020110 -47236473 + HAL1 LINE L1 916 1437 -1070 195 190 138 0 chr2 206020110 206020168 -47236415 - L2 LINE L2 -549 2765 2700 849 195 133 26 chr2 206020178 206020404 -47236179 - MIR SINE MIR -2 260 11 387 247 58 63 chr2 206020408 206020582 -47236001 + HAL1 LINE L1 1506 1678 -829 242 370 7 22 chr2 206021089 206021227 -47235356 + MIR SINE MIR 71 206 -56 932 277 8 8 chr2 206021256 206021491 -47235092 + MIR SINE MIR 20 254 -8 26 0 0 0 chr2 206021597 206021623 -47234960 + AT_rich Low_complexity Low_complexity 1 26 0 1155 101 0 0 chr2 206021623 206021781 -47234802 - AluSg/x SINE Alu -22 288 131 186 43 0 0 chr2 206021781 206021804 -47234779 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2025 106 3 0 chr2 206021806 206022089 -47234494 - AluSg SINE Alu -26 284 1 358 286 116 9 chr2 206023729 206023851 -47232732 + MIR3 SINE MIR 24 159 -49 372 346 102 15 chr2 206023965 206024170 -47232413 + MIR SINE MIR 29 251 -11 267 320 10 10 chr2 206024418 206024521 -47232062 - Charlie8 DNA MER1_type -2179 238 136 7163 160 3 11 chr2 206024521 206025424 -47231159 + L1P LINE L1 4015 4908 -1238 2114 105 0 0 chr2 206025424 206025737 -47230846 + AluSx SINE Alu 1 313 0 7163 160 3 11 chr2 206025737 206026071 -47230512 + L1P LINE L1 4908 5243 -903 222 313 180 17 chr2 206026508 206026741 -47229842 + L2 LINE L2 2140 2410 -904 2143 120 3 0 chr2 206027073 206027382 -47229201 + AluSp SINE Alu 3 312 -1 259 98 0 78 chr2 206027665 206027716 -47228867 + AluJo/FLAM SINE Alu 85 131 -171 2091 114 6 19 chr2 206027718 206028035 -47228548 + AluSq SINE Alu 1 313 0 195 292 180 11 chr2 206028604 206028693 -47227890 - MIR SINE MIR -76 186 83 2282 80 0 7 chr2 206028861 206029162 -47227421 - AluSq SINE Alu -14 299 1 2185 111 0 0 chr2 206029577 206029883 -47226700 - AluSx SINE Alu -6 306 1 2223 92 0 3 chr2 206029892 206030187 -47226396 - AluSc SINE Alu -15 294 1 265 256 86 51 chr2 206030272 206030389 -47226194 + MIR SINE MIR 19 139 -123 669 249 44 83 chr2 206030429 206030658 -47225925 + LTR50 LTR ERVL 387 606 -189 2656 176 38 36 chr2 206030660 206031211 -47225372 + MER68 LTR ERV1 1 552 -10 1339 104 5 10 chr2 206031296 206031497 -47225086 - AluSg/x SINE Alu 0 312 113 2150 117 0 0 chr2 206031673 206031972 -47224611 + AluSq SINE Alu 1 299 -14 637 130 0 37 chr2 206031975 206032083 -47224500 - FLAM_C SINE Alu -2 141 38 2018 113 3 0 chr2 206032395 206032686 -47223897 + AluY SINE Alu 1 292 -19 512 60 0 0 chr2 206033729 206033796 -47222787 + Alu SINE Alu 235 301 -8 2023 187 49 66 chr2 206033796 206034309 -47222274 + MLT2B3 LTR ERVL 1 504 -50 1519 161 39 21 chr2 206034354 206034508 -47222075 - AluJo SINE Alu -14 298 135 1410 158 121 8 chr2 206034508 206034773 -47221810 - AluSg1 SINE Alu -11 298 4 1519 161 39 21 chr2 206034773 206034898 -47221685 - AluJo SINE Alu -177 135 14 1382 240 66 95 chr2 206034946 206035530 -47221053 - HERV16 LTR ERVL -2927 2069 1492 1391 117 36 5 chr2 206035767 206035990 -47220593 + AluSg/x SINE Alu 67 296 -14 311 221 58 0 chr2 206035993 206036079 -47220504 - MLT1L LTR MaLR -18 597 507 1151 175 27 18 chr2 206036091 206036314 -47220269 + MER50 LTR ERV1 1 225 -509 4715 123 107 76 chr2 206036314 206037669 -47218914 - pTR5 LTR ERV1 -12 2426 741 1702 132 81 4 chr2 206037842 206038115 -47218468 - AluSc SINE Alu -15 294 1 342 0 0 0 chr2 206038258 206038296 -47218287 + (TG)n Simple_repeat Simple_repeat 1 38 0 459 206 93 9 chr2 206038320 206038427 -47218156 - MER5A DNA MER1_type 0 189 74 561 160 28 35 chr2 206038735 206038879 -47217704 - MER20B DNA MER1_type -59 724 582 886 186 14 27 chr2 206039201 206039421 -47217162 - L1MB4 LINE L1 -2 6178 5962 2070 95 7 10 chr2 206039863 206040158 -47216425 - AluSc SINE Alu -15 294 1 988 255 65 14 chr2 206040317 206040611 -47215972 + LTR16A LTR ERVL 63 371 -79 2260 90 0 0 chr2 206040634 206040934 -47215649 - AluY SINE Alu -11 300 1 2088 113 0 3 chr2 206040934 206041234 -47215349 - AluSq SINE Alu -13 300 1 934 96 0 29 chr2 206041261 206041397 -47215186 - FLAM_C SINE Alu 0 133 2 331 226 0 0 chr2 206041408 206041470 -47215113 + LTR16A LTR ERVL 389 450 0 405 0 0 0 chr2 206041747 206041792 -47214791 + (CA)n Simple_repeat Simple_repeat 2 46 0 227 200 111 0 chr2 206041811 206041856 -47214727 + Alu SINE Alu 120 169 -133 2101 97 7 3 chr2 206042188 206042486 -47214097 + AluSp SINE Alu 2 300 -13 1698 95 0 0 chr2 206042590 206042811 -47213772 + AluSx SINE Alu 1 221 -91 1035 173 0 0 chr2 206044251 206044430 -47212153 - AluJb SINE Alu -1 311 133 21 0 0 0 chr2 206045034 206045055 -47211528 + AT_rich Low_complexity Low_complexity 1 21 0 581 69 0 23 chr2 206045144 206045231 -47211352 - Alu SINE Alu 0 311 227 715 245 7 0 chr2 206045338 206045493 -47211090 + AluJb SINE Alu 145 300 -12 204 254 51 51 chr2 206046282 206046341 -47210242 + L3 LINE CR1 1504 1562 -15 712 79 0 138 chr2 206046365 206046517 -47210066 - FRAM SINE Alu -20 156 26 223 320 175 15 chr2 206047933 206048139 -47208444 - L2 LINE L2 -228 3044 2806 530 234 260 46 chr2 206048705 206049430 -47207153 - L1ME2 LINE L1 -292 5872 5369 1714 164 3 16 chr2 206049046 206049357 -47207226 - AluJb SINE Alu -5 307 1 267 289 22 78 chr2 206049357 206049463 -47207120 - L1PA8A LINE L1 -705 5426 5333 497 160 50 0 chr2 206049487 206049587 -47206996 - L1MB3 LINE L1 0 6183 6079 826 214 34 63 chr2 206049631 206049869 -47206714 + MER112 DNA MER1_type 29 259 -1 1541 251 69 74 chr2 206049869 206050141 -47206442 - L1ME2 LINE L1 -832 5314 5042 2094 111 3 3 chr2 206050141 206050438 -47206145 - AluSx SINE Alu -15 297 1 1541 251 69 74 chr2 206050438 206050675 -47205908 - L1ME2 LINE L1 -1104 5042 4805 2370 112 24 27 chr2 206050675 206051051 -47205532 + THE1C LTR MaLR 1 375 0 1541 251 69 74 chr2 206051051 206051351 -47205232 - L1ME2 LINE L1 -1341 4805 4507 1910 152 7 0 chr2 206051351 206051661 -47204922 - AluSx SINE Alu 0 312 1 1541 251 69 74 chr2 206051661 206051807 -47204776 - L1ME2 LINE L1 -1639 4507 4362 672 188 120 23 chr2 206051910 206052043 -47204540 + MER58A DNA MER1_type 1 146 0 850 53 150 164 chr2 206052143 206052369 -47204214 - L1MA1 LINE L1 -41 6261 6039 1800 108 65 4 chr2 206053467 206053745 -47202838 + AluSx SINE Alu 3 297 -15 420 262 91 14 chr2 206053750 206053911 -47202672 - L1MC4a LINE L1 -916 6869 6671 1913 112 42 3 chr2 206054790 206055076 -47201507 + AluSq SINE Alu 5 301 -12 221 175 140 18 chr2 206055686 206055743 -47200840 - MIR SINE MIR -115 93 30 1635 161 17 7 chr2 206055779 206056071 -47200512 + AluJo SINE Alu 3 297 -15 1188 135 0 5 chr2 206056750 206056935 -47199648 + AluSg SINE Alu 1 184 -126 216 0 0 0 chr2 206057410 206057434 -47199149 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 481 155 68 10 chr2 206057449 206057552 -47199031 + AluY SINE Alu 200 308 -3 2122 107 10 0 chr2 206057558 206057847 -47198736 + AluSg SINE Alu 1 292 -18 1014 185 0 0 chr2 206058736 206058909 -47197674 - AluJb SINE Alu -14 298 126 847 144 8 0 chr2 206059017 206059149 -47197434 - AluJb SINE Alu -179 133 1 696 159 9 0 chr2 206059212 206059347 -47197236 + FLAM_C SINE Alu 6 141 0 1877 133 10 7 chr2 206059446 206059748 -47196835 + AluSq SINE Alu 1 303 -10 225 323 131 0 chr2 206059842 206059941 -47196642 + L2 LINE L2 3161 3272 0 192 77 0 0 chr2 206060555 206060581 -47196002 + (A)n Simple_repeat Simple_repeat 1 26 0 2133 113 0 0 chr2 206060687 206060987 -47195596 - AluSx SINE Alu -12 300 1 999 164 5 21 chr2 206061672 206061861 -47194722 - AluJb SINE Alu 0 312 127 446 213 0 43 chr2 206061873 206061967 -47194616 - L1MC4 LINE L1 -1339 6703 6614 748 149 0 101 chr2 206061972 206062120 -47194463 - FLAM_C SINE Alu -9 134 2 2100 112 13 3 chr2 206062566 206062871 -47193712 - AluSx SINE Alu -4 308 1 1285 62 119 6 chr2 206062906 206062936 -47193647 - MER107 DNA MER1_type 0 197 172 203 0 0 36 chr2 206062936 206062964 -47193619 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1285 62 119 6 chr2 206062964 206063109 -47193474 - MER107 DNA MER1_type -25 172 2 539 196 5 119 chr2 206063217 206063436 -47193147 - L1MC4a LINE L1 -1 7807 7614 1328 135 0 0 chr2 206063436 206063629 -47192954 - AluSg/x SINE Alu -15 295 103 786 215 0 0 chr2 206063729 206063873 -47192710 + AluSg/x SINE Alu 158 301 -11 1536 199 7 20 chr2 206063930 206064096 -47192487 - AluJo SINE Alu -14 298 136 2390 92 7 0 chr2 206064096 206064402 -47192181 - AluSq SINE Alu -5 308 1 1536 199 7 20 chr2 206064402 206064537 -47192046 - AluJo SINE Alu -176 136 1 189 250 250 0 chr2 206065255 206065343 -47191240 + MIR SINE MIR 59 168 -94 2291 82 0 39 chr2 206065499 206065804 -47190779 + AluY SINE Alu 5 297 -14 450 205 186 13 chr2 206065905 206066061 -47190522 + MIR SINE MIR 78 260 -2 230 169 0 31 chr2 206066572 206066637 -47189946 + L1MC4 LINE L1 6641 6703 -1339 363 44 0 0 chr2 206066638 206066683 -47189900 + (TG)n Simple_repeat Simple_repeat 2 46 0 180 0 0 0 chr2 206066682 206066702 -47189881 + (TA)n Simple_repeat Simple_repeat 1 20 0 * 2181 120 3 7 chr2 206066702 206067002 -47189581 - AluSq SINE Alu -10 303 5 527 195 0 18 chr2 206067017 206067130 -47189453 - AluJb SINE Alu 0 312 202 2230 85 7 7 chr2 206067164 206067458 -47189125 - AluSg SINE Alu -10 300 7 22 0 0 0 chr2 206068118 206068140 -47188443 + AT_rich Low_complexity Low_complexity 1 22 0 1492 108 5 0 chr2 206068370 206068565 -47188018 - AluSg/x SINE Alu -13 299 104 2370 102 3 0 chr2 206068706 206069011 -47187572 + AluSx SINE Alu 1 306 -6 1680 184 48 12 chr2 206069796 206070127 -47186456 + THE1B LTR MaLR 19 361 -3 2138 110 0 29 chr2 206070246 206070555 -47186028 - AluSx SINE Alu -12 300 1 864 153 67 0 chr2 206070555 206070705 -47185878 - FRAM SINE Alu -6 170 11 185 0 40 0 chr2 206070712 206070737 -47185846 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 2343 94 3 7 chr2 206070739 206071048 -47185535 - AluSg SINE Alu -2 308 1 2112 179 103 12 chr2 206071468 206071887 -47184696 - LTR32 LTR ERVL 0 471 15 1859 106 19 8 chr2 206072115 206072379 -47184204 + MER50 LTR ERV1 434 700 -34 323 248 28 85 chr2 206072821 206072962 -47183621 - MLT1L LTR MaLR -351 264 132 877 259 77 88 chr2 206073569 206074013 -47182570 + L2 LINE L2 2650 3097 -216 180 0 0 0 chr2 206074013 206074033 -47182550 + (TTA)n Simple_repeat Simple_repeat 2 21 0 877 259 77 88 chr2 206074033 206074048 -47182535 + L2 LINE L2 3097 3111 -202 2173 82 10 27 chr2 206074048 206074342 -47182241 - AluSx SINE Alu -23 289 1 877 259 77 88 chr2 206074342 206074558 -47182025 + L2 LINE L2 3111 3313 0 1841 167 14 3 chr2 206074633 206074986 -47181597 - AluJo SINE Alu 0 356 1 2333 119 0 0 chr2 206074994 206075304 -47181279 - AluSx SINE Alu -2 310 1 253 361 58 21 chr2 206075563 206075754 -47180829 + L3 LINE CR1 586 783 -794 1555 185 14 28 chr2 206075893 206076179 -47180404 + AluJo SINE Alu 1 282 -30 1998 177 151 61 chr2 206076255 206076409 -47180174 - MER92B LTR ERV1 -10 626 487 2469 83 0 0 chr2 206076409 206076711 -47179872 - AluSc SINE Alu -7 302 1 1998 177 151 61 chr2 206076711 206077127 -47179456 - MER92B LTR ERV1 -149 487 5 372 133 0 0 chr2 206077181 206077241 -47179342 + (CA)n Simple_repeat Simple_repeat 2 61 0 2088 120 0 21 chr2 206077602 206077893 -47178690 - AluSg SINE Alu -15 295 11 472 272 60 104 chr2 206077973 206078289 -47178294 + L3 LINE CR1 1086 1387 -190 896 198 64 6 chr2 206078502 206078674 -47177909 + MER58A DNA MER1_type 37 218 -6 1910 136 73 0 chr2 206078912 206079198 -47177385 + AluSg SINE Alu 1 307 -3 1730 177 7 7 chr2 206079938 206080248 -47176335 + AluJo SINE Alu 2 311 -1 2321 116 0 3 chr2 206080423 206080734 -47175849 + AluSg SINE Alu 1 310 0 384 266 73 9 chr2 206080815 206080924 -47175659 - L2 LINE L2 -14 3299 3184 219 188 0 0 chr2 206081162 206081210 -47175373 + (TA)n Simple_repeat Simple_repeat 1 48 0 483 104 26 0 chr2 206081219 206081296 -47175287 + Alu SINE Alu 233 311 0 2343 91 0 7 chr2 206081482 206081780 -47174803 + AluSx SINE Alu 1 296 -16 1126 132 35 7 chr2 206081934 206082146 -47174437 - L1MA5A LINE L1 -15 6276 6065 2143 111 49 31 chr2 206082146 206082470 -47174113 + MER1B DNA MER1_type 4 333 -6 2187 131 0 48 chr2 206082478 206082602 -47173981 - L1MA5A LINE L1 -216 6081 5953 2421 69 0 28 chr2 206082602 206082920 -47173663 - AluY SINE Alu -1 310 2 2340 76 3 3 chr2 206082929 206083220 -47173363 - AluSc SINE Alu -18 291 1 2187 131 0 48 chr2 206083220 206083415 -47173168 - L1MA5A LINE L1 -352 5945 5742 1601 206 6 3 chr2 206083415 206083726 -47172857 - AluJo SINE Alu 0 312 1 1377 157 18 136 chr2 206083726 206084058 -47172525 - AluJb SINE Alu -7 295 3 2187 131 0 48 chr2 206084058 206084122 -47172461 - L1MA5A LINE L1 -553 5744 5705 373 194 0 28 chr2 206084308 206084380 -47172203 - MSTC LTR MaLR -358 70 1 2156 135 11 52 chr2 206084576 206084654 -47171929 + MER7A DNA MER2_type 1 81 -2957 2388 85 0 0 chr2 206084654 206084949 -47171634 + AluSc SINE Alu 1 295 -14 2156 135 11 52 chr2 206084949 206085233 -47171350 + MER7A DNA MER2_type 81 346 0 626 260 45 45 chr2 206085503 206085703 -47170880 + MLT1L LTR MaLR 201 400 -215 406 257 62 60 chr2 206086262 206086607 -47169976 + MLT1K LTR MaLR 203 580 -8 2352 96 0 7 chr2 206086621 206086922 -47169661 + AluSx SINE Alu 1 299 -13 2268 95 6 44 chr2 206086936 206087079 -47169504 + AluSx SINE Alu 1 148 -164 198 0 0 0 chr2 206087079 206087101 -47169482 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 2268 95 6 44 chr2 206087101 206087274 -47169309 + AluSx SINE Alu 148 305 -7 1301 157 60 135 chr2 206087534 206087913 -47168670 - MLT1A1 LTR MaLR 0 365 45 2228 115 0 3 chr2 206087913 206088218 -47168365 - AluSx SINE Alu -8 304 1 1301 157 60 135 chr2 206088218 206088260 -47168323 - MLT1A1 LTR MaLR -320 45 1 622 161 12 99 chr2 206089049 206089210 -47167373 + FRAM SINE Alu 20 166 -10 1719 100 21 0 chr2 206089220 206089459 -47167124 + AluSp SINE Alu 66 309 -4 2107 137 0 0 chr2 206089585 206089877 -47166706 + AluSx SINE Alu 1 292 -20 1567 153 92 18 chr2 206089949 206090230 -47166353 - AluJb SINE Alu 0 312 11 538 184 54 115 chr2 206090245 206090418 -47166165 + L1MC5 LINE L1 7516 7667 -294 2230 120 0 0 chr2 206090418 206090719 -47165864 - AluSx SINE Alu -9 303 3 538 184 54 115 chr2 206090719 206090823 -47165760 + L1MC5 LINE L1 7667 7776 -185 630 154 0 55 chr2 206091034 206091168 -47165415 - FLAM_C SINE Alu 0 147 20 2364 86 10 13 chr2 206091255 206091558 -47165025 - AluSx SINE Alu -10 302 1 384 267 67 12 chr2 206091697 206091862 -47164721 + L1ME4a LINE L1 5760 5933 -188 253 294 76 0 chr2 206091877 206091969 -47164614 + MIR3 SINE MIR 99 197 -11 201 200 33 60 chr2 206092066 206092216 -47164367 + (TTATA)n Simple_repeat Simple_repeat 3 148 0 * 224 173 99 25 chr2 206092107 206092269 -47164314 + (TTAA)n Simple_repeat Simple_repeat 4 177 0 1857 149 0 4 chr2 206092396 206092672 -47163911 + AluJb SINE Alu 1 275 -37 693 163 111 0 chr2 206092677 206092812 -47163771 - MLT1A1 LTR MaLR -215 150 1 852 187 45 0 chr2 206092888 206093043 -47163540 - FRAM SINE Alu -14 162 1 616 278 143 36 chr2 206093070 206093491 -47163092 + L1ME LINE L1 5271 5736 -385 368 297 67 42 chr2 206094027 206094229 -47162354 - MIR SINE MIR -14 248 38 1941 150 0 7 chr2 206094229 206094523 -47162060 - AluSx SINE Alu -18 294 3 368 297 67 42 chr2 206094523 206094559 -47162024 - MIR SINE MIR -224 38 4 2261 154 95 0 chr2 206094815 206095204 -47161379 + MSTB LTR MaLR 1 426 0 2106 238 73 30 chr2 206095503 206096137 -47160446 - HsTC2c DNA Tc2 -4 725 65 346 350 0 8 chr2 206096209 206096329 -47160254 - MIR SINE MIR -121 141 23 857 235 123 8 chr2 206096587 206096847 -47159736 + LTR16A1 LTR ERVL 168 457 0 1901 168 0 13 chr2 206096907 206097210 -47159373 - AluJb SINE Alu -13 299 1 192 272 54 43 chr2 206099714 206099806 -47156777 + MIR SINE MIR 100 192 -70 862 245 106 61 chr2 206099838 206100114 -47156469 - L2 LINE L2 -45 3268 3006 2732 23 7 3 chr2 206100114 206100424 -47156159 + AluY SINE Alu 1 311 0 862 245 106 61 chr2 206100424 206100716 -47155867 - L2 LINE L2 -307 3006 2678 4457 124 20 25 chr2 206100901 206101592 -47154991 - LTR12 LTR ERV1 0 688 1 794 236 61 47 chr2 206101669 206101965 -47154618 - pTR5 LTR ERV1 -1410 1028 729 1853 152 13 20 chr2 206102016 206102318 -47154265 + AluJo SINE Alu 1 300 -12 411 235 147 36 chr2 206102318 206102569 -47154014 + L1MC5 LINE L1 7377 7655 -306 2369 82 7 0 chr2 206102569 206102860 -47153723 + AluSp SINE Alu 1 293 -20 223 164 30 15 chr2 206103064 206103131 -47153452 + (TTATA)n Simple_repeat Simple_repeat 2 69 0 238 269 55 59 chr2 206104253 206104314 -47152269 - L1M4 LINE L1 -2701 3445 3385 1988 164 3 60 chr2 206104314 206104632 -47151951 - MLT1A1 LTR MaLR 0 365 71 2328 77 0 10 chr2 206104632 206104931 -47151652 - AluSq SINE Alu -17 296 1 1988 164 3 60 chr2 206104931 206104995 -47151588 - MLT1A1 LTR MaLR -294 71 5 238 269 55 59 chr2 206104995 206105204 -47151379 - L1M4 LINE L1 -2761 3385 3176 295 335 71 48 chr2 206105715 206105867 -47150716 + L2 LINE L2 2832 2979 -334 2040 121 16 32 chr2 206105867 206106182 -47150401 - AluSx SINE Alu -2 310 1 295 335 71 48 chr2 206106182 206106492 -47150091 + L2 LINE L2 2979 3305 -8 2235 90 41 0 chr2 206106666 206106956 -47149627 - AluY SINE Alu -9 302 1 1537 228 8 16 chr2 206107226 206107590 -47148993 - MLT1A1 LTR MaLR 0 365 5 2421 159 48 11 chr2 206107728 206108167 -47148416 - MSTB2 LTR MaLR 0 457 3 1967 137 28 0 chr2 206108349 206108634 -47147949 - AluSx SINE Alu -19 293 1 279 0 0 0 chr2 206109108 206109139 -47147444 + (TC)n Simple_repeat Simple_repeat 2 32 0 1796 119 36 29 chr2 206109139 206109416 -47147167 - AluJo SINE Alu -27 285 7 355 243 9 28 chr2 206110105 206110212 -47146371 - LTR16C LTR ERVL -2 489 385 2146 126 3 3 chr2 206111157 206111451 -47145132 - AluJb SINE Alu -18 294 1 195 139 0 0 chr2 206111595 206111631 -47144952 + (TG)n Simple_repeat Simple_repeat 1 36 0 317 163 104 96 chr2 206111662 206111797 -47144786 + MLT1K LTR MaLR 449 584 -4 1658 147 11 23 chr2 206111832 206112097 -47144486 - AluJb SINE Alu -45 267 6 323 365 106 20 chr2 206112129 206112384 -47144199 - L1ME LINE L1 -552 5569 5293 2083 138 0 3 chr2 206112571 206112868 -47143715 - AluSx SINE Alu -16 296 1 298 301 58 10 chr2 206112870 206112973 -47143610 + L2 LINE L2 2968 3075 -238 1859 155 14 0 chr2 206113142 206113426 -47143157 - AluSx SINE Alu -21 291 4 1860 156 13 7 chr2 206113872 206114173 -47142410 - AluJo SINE Alu -9 303 1 2277 104 0 22 chr2 206114597 206114914 -47141669 + AluSx SINE Alu 1 310 -2 539 264 72 18 chr2 206115043 206115210 -47141373 + AluJb SINE Alu 122 297 -15 2130 136 3 0 chr2 206115257 206115559 -47141024 + AluSx SINE Alu 1 303 -9 954 174 126 123 chr2 206115566 206116036 -47140547 - L1MC5 LINE L1 -77 7884 7414 2392 84 3 0 chr2 206116210 206116508 -47140075 - AluSx SINE Alu -13 299 1 763 209 90 0 chr2 206116520 206116697 -47139886 + L1MD1 LINE L1 5659 5851 -391 727 131 0 0 chr2 206117030 206117129 -47139454 - AluSg/x SINE Alu -20 290 192 1987 126 0 4 chr2 206117129 206117399 -47139184 - AluSq SINE Alu -44 269 1 1350 181 11 39 chr2 206117686 206117946 -47138637 - AluJb SINE Alu -26 286 34 270 0 0 0 chr2 206117962 206117992 -47138591 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 2242 89 0 0 chr2 206117992 206118272 -47138311 - AluSg1 SINE Alu -29 280 1 237 311 38 61 chr2 206119255 206119387 -47137196 - MER5A DNA MER1_type -35 154 26 1287 95 0 0 chr2 206119550 206119718 -47136865 + AluSq SINE Alu 136 303 -10 1646 178 20 7 chr2 206119992 206120290 -47136293 - AluJb SINE Alu -7 305 4 2347 77 0 0 chr2 206120506 206120827 -47135756 - AluSq SINE Alu 0 321 1 186 43 0 0 chr2 206120832 206120855 -47135728 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1811 121 18 7 chr2 206120860 206121133 -47135450 - AluSx SINE Alu -36 276 1 326 254 88 55 chr2 206121314 206121495 -47135088 + L1MC4 LINE L1 7572 7758 -284 1946 120 34 10 chr2 206121500 206121792 -47134791 - AluSx SINE Alu -11 301 3 364 167 17 0 chr2 206121792 206121852 -47134731 - AluS SINE Alu -241 61 1 1061 106 0 0 chr2 206122614 206122755 -47133828 - AluSq/x SINE Alu -171 141 1 2202 85 28 0 chr2 206122966 206123249 -47133334 - AluY SINE Alu -18 293 3 26 0 0 0 chr2 206123249 206123275 -47133308 + AT_rich Low_complexity Low_complexity 1 26 0 1921 89 16 0 chr2 206123295 206123541 -47133042 - L1PA5 LINE L1 0 6154 5905 26 0 0 0 chr2 206123811 206123837 -47132746 + AT_rich Low_complexity Low_complexity 1 26 0 1839 159 7 10 chr2 206123868 206124163 -47132420 - AluJb SINE Alu -18 294 1 409 143 57 14 chr2 206124163 206124233 -47132350 - AluJo/FLAM SINE Alu -202 110 38 24 0 0 0 chr2 206124301 206124325 -47132258 + AT_rich Low_complexity Low_complexity 1 24 0 644 270 0 0 chr2 206124965 206125091 -47131492 - FLAM_A SINE Alu -7 126 1 2197 129 3 0 chr2 206127613 206127916 -47128667 - AluSx SINE Alu -8 304 1 1844 138 3 60 chr2 206128096 206128414 -47128169 - AluSx SINE Alu -12 300 1 22 35 0 0 chr2 206128553 206128582 -47128001 + AT_rich Low_complexity Low_complexity 1 29 0 1757 157 115 28 chr2 206129185 206129541 -47127042 - MLT1B LTR MaLR 0 390 4 1652 148 6 61 chr2 206129752 206130063 -47126520 + AluJo SINE Alu 1 294 -18 2123 130 0 10 chr2 206130316 206130615 -47125968 + AluSg SINE Alu 1 296 -14 1108 292 89 70 chr2 206130667 206130845 -47125738 + L2 LINE L2 1615 1788 -1526 1784 168 7 3 chr2 206130845 206131136 -47125447 - AluJo SINE Alu -9 303 12 1108 292 89 70 chr2 206131136 206131745 -47124838 + L2 LINE L2 1788 2417 -897 580 157 0 0 chr2 206131763 206131846 -47124737 + AluS SINE Alu 2 84 -228 1246 157 9 23 chr2 206132184 206132400 -47124183 + AluJb SINE Alu 86 298 -14 2381 89 0 0 chr2 206132537 206132840 -47123743 + AluSg SINE Alu 1 303 -7 1092 190 62 44 chr2 206133833 206133930 -47122653 - AluJo SINE Alu -82 230 136 2284 92 3 3 chr2 206133930 206134225 -47122358 - AluSp SINE Alu -18 295 1 1092 190 62 44 chr2 206134225 206134353 -47122230 - AluJo SINE Alu -176 136 1 1559 142 0 0 chr2 206134401 206134626 -47121957 - AluSg/x SINE Alu -11 299 75 2170 128 0 7 chr2 206135715 206136020 -47120563 - AluSx SINE Alu -9 303 1 1792 155 16 7 chr2 206136230 206136534 -47120049 - AluJo SINE Alu -5 307 1 24 53 0 0 chr2 206137065 206137103 -47119480 + AT_rich Low_complexity Low_complexity 1 38 0 686 103 0 0 chr2 206137103 206137190 -47119393 - FLAM_C SINE Alu -25 118 32 23 0 0 0 chr2 206137243 206137266 -47119317 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 206137443 206137471 -47119112 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr2 206137565 206137595 -47118988 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr2 206138304 206138326 -47118257 + AT_rich Low_complexity Low_complexity 1 22 0 739 108 117 33 chr2 206138326 206138446 -47118137 - AluJb SINE Alu -181 131 2 24 32 0 0 chr2 206138450 206138481 -47118102 + AT_rich Low_complexity Low_complexity 1 31 0 197 279 73 29 chr2 206138659 206138727 -47117856 + L3b LINE CR1 1293 1363 -220 29 20 0 39 chr2 206138736 206138762 -47117821 + AT_rich Low_complexity Low_complexity 1 26 -23 2059 130 11 0 chr2 206138762 206139046 -47117537 - AluSx SINE Alu -25 287 1 29 20 0 39 chr2 206139046 206139070 -47117513 + AT_rich Low_complexity Low_complexity 26 49 0 598 115 0 0 chr2 206139070 206139148 -47117435 - AluJ/FLAM SINE Alu -234 78 1 769 175 8 8 chr2 206140807 206140933 -47115650 - FLAM_A SINE Alu -3 139 14 22 0 0 0 chr2 206141434 206141456 -47115127 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr2 206141723 206141747 -47114836 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr2 206142888 206142910 -47113673 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 206145380 206145408 -47111175 + AT_rich Low_complexity Low_complexity 1 28 0 2123 126 0 3 chr2 206145531 206145832 -47110751 - AluSx SINE Alu -12 300 1 703 105 0 129 chr2 206146053 206146177 -47110406 + FRAM SINE Alu 57 164 -12 1745 96 0 0 chr2 206147357 206147575 -47109008 + AluSg/x SINE Alu 78 295 -15 1468 60 0 11 chr2 206148090 206148275 -47108308 - L1PA8 LINE L1 0 6172 5990 305 315 48 79 chr2 206149582 206149747 -47106836 - L2 LINE L2 -10 3262 3103 2422 48 21 0 chr2 206150133 206150424 -47106159 + AluY SINE Alu 1 297 -14 1334 178 5 9 chr2 206151508 206151727 -47104856 - MER20 DNA MER1_type -1 218 1 276 305 158 12 chr2 206153123 206153230 -47103353 + MER5A DNA MER1_type 1 91 -98 2221 92 13 10 chr2 206153230 206153533 -47103050 + AluSp SINE Alu 1 304 -9 276 305 158 12 chr2 206153533 206153589 -47102994 + MER5A DNA MER1_type 91 188 -1 947 213 73 37 chr2 206154001 206154264 -47102319 + MIR SINE MIR 1 251 -11 811 164 0 16 chr2 206154301 206154423 -47102160 - FLAM_C SINE Alu -22 121 2 2157 119 0 7 chr2 206154721 206155014 -47101569 + AluSx SINE Alu 1 291 -21 1874 153 0 19 chr2 206155205 206155513 -47101070 - AluJb SINE Alu -10 302 1 867 156 0 8 chr2 206155517 206155645 -47100938 - FLAM_C SINE Alu -16 127 1 278 214 18 0 chr2 206155789 206155845 -47100738 - L2 LINE L2 0 3272 3216 252 319 25 34 chr2 206156129 206156248 -47100335 + L2 LINE L2 3196 3313 0 3186 112 7 9 chr2 206156287 206156716 -47099867 - MSTA LTR MaLR 0 428 1 1610 181 14 14 chr2 206157556 206157844 -47098739 - AluJo SINE Alu -24 288 1 1984 158 0 0 chr2 206157865 206158162 -47098421 - AluJb SINE Alu -14 298 2 406 255 13 7 chr2 206158375 206158491 -47098092 - MIR SINE MIR -46 216 101 2510 54 0 10 chr2 206158575 206158872 -47097711 - AluY SINE Alu -15 296 3 1823 139 7 14 chr2 206159704 206159992 -47096591 - AluJb SINE Alu -26 286 1 2427 65 0 23 chr2 206160387 206160697 -47095886 + AluY SINE Alu 9 311 0 273 159 0 0 chr2 206160928 206160991 -47095592 + (ATG)n Simple_repeat Simple_repeat 3 65 0 182 343 66 52 chr2 206161854 206162125 -47094458 + L2 LINE L2 2886 3160 -112 24 0 0 0 chr2 206162862 206162886 -47093697 + AT_rich Low_complexity Low_complexity 1 24 0 1674 119 8 0 chr2 206162890 206163126 -47093457 + AluSx SINE Alu 1 238 -74 2180 117 3 0 chr2 206163889 206164188 -47092395 - AluSq SINE Alu -13 300 1 1882 163 0 23 chr2 206164200 206164507 -47092076 - AluJb SINE Alu -12 300 1 193 314 35 47 chr2 206164701 206164787 -47091796 - MIR SINE MIR -73 135 51 286 333 68 0 chr2 206165088 206165220 -47091363 - MIR SINE MIR -32 230 90 232 370 11 0 chr2 206165305 206165397 -47091186 - MIR SINE MIR -168 94 2 1641 186 0 35 chr2 206165410 206165722 -47090861 - AluJo SINE Alu -11 301 1 454 203 126 44 chr2 206165807 206165989 -47090594 + MIR SINE MIR 16 212 -50 196 227 23 0 chr2 206166676 206166720 -47089863 - L2 LINE L2 -203 3069 3025 716 33 11 0 chr2 206166863 206166954 -47089629 + (GA)n Simple_repeat Simple_repeat 1 92 0 2142 106 0 3 chr2 206167029 206167312 -47089271 + AluSx SINE Alu 1 282 -30 1717 124 8 0 chr2 206167338 206167572 -47089011 + AluSx SINE Alu 1 236 -76 6771 156 38 76 chr2 206217573 206217767 -47038816 + L1MA4A LINE L1 2329 2529 -4319 2073 137 30 0 chr2 206217767 206218066 -47038517 + AluSx SINE Alu 1 308 -4 6771 156 38 76 chr2 206218066 206218986 -47037597 + L1MA4A LINE L1 2529 3483 -3365 1372 101 43 0 chr2 206218986 206219194 -47037389 - L1PA16 LINE L1 -11 6155 5939 6771 156 38 76 chr2 206219194 206219349 -47037234 + L1MA4A LINE L1 3483 3642 -3206 1626 156 17 50 chr2 206219349 206219650 -47036933 - AluJb SINE Alu -21 291 1 1865 174 0 10 chr2 206219653 206219952 -47036631 - AluJb SINE Alu -16 296 1 6771 156 38 76 chr2 206219952 206221178 -47035405 + L1MA4A LINE L1 3644 4729 -2119 790 149 25 0 chr2 206221217 206221338 -47035245 + FLAM_C SINE Alu 1 124 -9 3913 140 45 19 chr2 206221349 206222679 -47033904 + L1MA4A LINE L1 5164 6531 -474 1083 183 0 78 chr2 206222679 206222909 -47033674 + AluJb SINE Alu 85 296 -16 2592 136 6 33 chr2 206222917 206223284 -47033299 + L1MA4A LINE L1 6523 6875 -130 1790 122 94 17 chr2 206223284 206223572 -47033011 + AluSx SINE Alu 1 310 -2 2592 136 6 33 chr2 206223572 206223689 -47032894 + L1MA4A LINE L1 6875 6994 -11 705 241 78 35 chr2 206223998 206224230 -47032353 + MIR SINE MIR 21 262 0 2041 133 3 3 chr2 206224313 206224607 -47031976 - AluSq SINE Alu -19 294 1 1965 119 77 0 chr2 206224639 206224924 -47031659 - AluSc SINE Alu -2 307 1 1430 173 0 57 chr2 206225556 206225839 -47030744 + AluJb SINE Alu 1 267 -45 35 24 0 0 chr2 206225936 206225978 -47030605 + AT_rich Low_complexity Low_complexity 1 42 0 272 275 44 69 chr2 206226815 206226975 -47029608 + MER102a DNA MER1_type 1 156 -174 706 181 8 0 chr2 206226979 206227106 -47029477 + FLAM_C SINE Alu 1 128 -5 21 0 0 0 chr2 206227106 206227127 -47029456 + AT_rich Low_complexity Low_complexity 1 21 0 305 251 86 49 chr2 206227130 206227293 -47029290 + MER102a DNA MER1_type 150 318 -12 594 272 165 13 chr2 206227599 206227823 -47028760 - MIR SINE MIR -3 259 2 854 228 114 0 chr2 206227859 206228078 -47028505 - MIR SINE MIR -6 256 13 2376 85 0 0 chr2 206228306 206228599 -47027984 - AluSc SINE Alu -16 293 1 1997 134 7 0 chr2 206229091 206229427 -47027156 - AluSx SINE Alu 0 338 1 1063 213 180 21 chr2 206229559 206229718 -47026865 - MER113 DNA MER1_type? -29 492 360 1787 169 9 31 chr2 206229718 206230037 -47026546 - AluJo SINE Alu 0 312 1 1063 213 180 21 chr2 206230037 206230300 -47026283 - MER113 DNA MER1_type? -161 360 3 446 111 56 0 chr2 206230431 206230503 -47026080 - MADE1 DNA Mariner -4 76 1 331 274 178 25 chr2 206230721 206230878 -47025705 - L3 LINE CR1 -293 1284 1104 529 257 29 53 chr2 206230906 206231077 -47025506 - L2 LINE L2 0 3313 3147 301 297 206 45 chr2 206231119 206231429 -47025154 - L3 LINE CR1 -504 1073 714 2175 230 70 11 chr2 206231434 206232061 -47024522 - HsTC2a DNA Tc2 -3 741 78 21 0 0 0 chr2 206232199 206232220 -47024363 + AT_rich Low_complexity Low_complexity 1 21 0 3453 157 55 14 chr2 206232407 206232496 -47024087 + L1MB2 LINE L1 5005 5089 -1082 2245 123 10 0 chr2 206232496 206232806 -47023777 - AluSq SINE Alu 0 313 1 3453 157 55 14 chr2 206232806 206233593 -47022990 + L1MB2 LINE L1 5089 5901 -270 1256 136 31 0 chr2 206233775 206234003 -47022580 + L1MB2 LINE L1 5910 6144 -27 25 31 0 0 chr2 206234011 206234043 -47022540 + AT_rich Low_complexity Low_complexity 1 32 0 764 137 0 0 chr2 206234044 206234168 -47022415 - L1MB3 LINE L1 -3 6180 6057 279 331 88 66 chr2 206235131 206235312 -47021271 - L2 LINE L2 -44 3228 3044 23 33 0 0 chr2 206235780 206235810 -47020773 + AT_rich Low_complexity Low_complexity 1 30 0 1827 162 44 0 chr2 206236633 206236930 -47019653 + AluJb SINE Alu 1 310 -2 808 125 0 76 chr2 206237231 206237375 -47019208 - FLAM_C SINE Alu 0 133 1 2215 112 0 3 chr2 206238104 206238400 -47018183 - AluSq SINE Alu -18 295 1 2157 139 3 6 chr2 206238690 206239034 -47017549 - MER7A DNA MER2_type -5 341 1 360 325 90 5 chr2 206240095 206240307 -47016276 + L1ME4a LINE L1 4723 4952 -1194 21 0 0 0 chr2 206240334 206240355 -47016228 + AT_rich Low_complexity Low_complexity 1 21 0 1706 164 6 28 chr2 206240750 206241067 -47015516 + AluJo SINE Alu 1 310 -2 1542 171 24 4 chr2 206241189 206241441 -47015142 - AluJo SINE Alu -55 257 1 365 298 132 31 chr2 206241464 206241692 -47014891 + L1ME4a LINE L1 5631 5881 -240 244 244 106 32 chr2 206242901 206243024 -47013559 + MER102a DNA MER1_type 197 328 -2 40883 33 22 2 chr2 206243381 206249438 -47007145 + L1PA2 LINE L1 1 6155 0 22 0 0 0 chr2 206249438 206249460 -47007123 + AT_rich Low_complexity Low_complexity 1 22 0 461 258 50 0 chr2 206251132 206251252 -47005331 + MIR SINE MIR 116 241 -21 2563 106 8 16 chr2 206251534 206251912 -47004671 - THE1C LTR MaLR 0 375 1 312 217 217 9 chr2 206252411 206252517 -47004066 + L1MC/D LINE L1 5710 5837 -1971 255 289 0 0 chr2 206254053 206254105 -47002478 + L2 LINE L2 3209 3260 -12 1874 156 0 3 chr2 206254119 206254440 -47002143 + AluJb SINE Alu 1 320 0 225 0 0 0 chr2 206254442 206254467 -47002116 + (TG)n Simple_repeat Simple_repeat 2 26 0 5011 57 0 0 chr2 206254536 206255153 -47001430 - L1PA6 LINE L1 -1 6153 5537 634 258 76 27 chr2 206255170 206255400 -47001183 + MIR SINE MIR 2 243 -19 241 87 22 22 chr2 206255499 206255545 -47001038 + (TC)n Simple_repeat Simple_repeat 1 46 0 22 0 0 0 chr2 206256251 206256273 -47000310 + GC_rich Low_complexity Low_complexity 1 22 0 258 348 96 27 chr2 206256850 206257037 -46999546 - L2 LINE L2 -254 3059 2860 754 236 10 77 chr2 206257119 206257225 -46999358 - MIR SINE MIR -6 256 144 2262 102 10 3 chr2 206257225 206257528 -46999055 + AluSg SINE Alu 1 305 -5 1714 149 24 27 chr2 206257537 206257859 -46998724 - AluJo SINE Alu 0 312 1 754 236 10 77 chr2 206257859 206257950 -46998633 - MIR SINE MIR -126 136 63 2037 130 9 38 chr2 206258054 206258370 -46998213 + AluSx SINE Alu 1 307 -5 689 110 9 0 chr2 206258370 206258479 -46998104 + (GGAGA)n Simple_repeat Simple_repeat 2 111 0 258 200 33 67 chr2 206258501 206258591 -46997992 - L2 LINE L2 -638 2676 2590 514 174 0 0 chr2 206258999 206259085 -46997498 + AluJ/FLAM SINE Alu 7 92 -220 13212 104 26 36 chr2 206259086 206259180 -46997403 - Tigger1 DNA MER2_type -254 2164 2071 1667 173 46 0 chr2 206259180 206259463 -46997120 - AluSx SINE Alu -16 296 1 13212 104 26 36 chr2 206259463 206259517 -46997066 - Tigger1 DNA MER2_type -347 2071 2018 2510 56 3 0 chr2 206259517 206259820 -46996763 - AluY SINE Alu -2 309 6 13212 104 26 36 chr2 206259820 206260044 -46996539 - Tigger1 DNA MER2_type -400 2018 1793 2029 130 0 55 chr2 206260044 206260180 -46996403 + AluSx SINE Alu 1 143 -169 2196 119 10 0 chr2 206260180 206260483 -46996100 + AluSq SINE Alu 2 307 -6 2029 130 0 55 chr2 206260483 206260676 -46995907 + AluSx SINE Alu 143 312 0 13212 104 26 36 chr2 206260676 206261537 -46995046 - Tigger1 DNA MER2_type -625 1793 925 1970 148 0 3 chr2 206261537 206261847 -46994736 + AluSx SINE Alu 1 309 0 13212 104 26 36 chr2 206261847 206262794 -46993789 - Tigger1 DNA MER2_type -1493 925 1 2190 113 7 0 chr2 206263149 206263458 -46993125 - AluSp SINE Alu -2 311 1 34 24 0 0 chr2 206264349 206264390 -46992193 + AT_rich Low_complexity Low_complexity 1 41 0 10143 22 0 189 chr2 206264390 206266091 -46990492 - SVA Other Other -7 1379 1 181 57 57 0 chr2 206266373 206266408 -46990175 + (TA)n Simple_repeat Simple_repeat 1 37 0 1388 150 0 13 chr2 206266435 206266661 -46989922 - AluJb SINE Alu -3 309 87 1682 200 0 0 chr2 206267552 206267833 -46988750 + AluJo SINE Alu 2 281 -31 370 0 0 0 chr2 206267833 206267874 -46988709 + (TAAAA)n Simple_repeat Simple_repeat 1 180 0 216 300 62 38 chr2 206268065 206268145 -46988438 + L2 LINE L2 3083 3164 -108 1647 160 84 56 chr2 206269356 206269864 -46986719 - LTR1B LTR ERV1 -2 824 247 23 33 0 0 chr2 206269864 206269894 -46986689 + AT_rich Low_complexity Low_complexity 1 30 0 474 316 67 13 chr2 206270663 206270888 -46985695 + MIR SINE MIR 13 249 -13 229 204 0 0 chr2 206271837 206271881 -46984702 + GA-rich Low_complexity Low_complexity 1 44 0 21006 65 5 1 chr2 206272011 206275508 -46981075 + L1PA6 LINE L1 2629 6154 0 2141 132 0 7 chr2 206275529 206275832 -46980751 + AluSx SINE Alu 1 301 -11 21 0 0 0 chr2 206276429 206276450 -46980133 + AT_rich Low_complexity Low_complexity 1 21 0 279 0 0 0 chr2 206276636 206276667 -46979916 + (TTA)n Simple_repeat Simple_repeat 3 33 0 7657 32 0 0 chr2 206276667 206277664 -46978919 - L1PA4 LINE L1 -18 6137 5141 212 186 0 51 chr2 206277792 206277851 -46978732 - L2 LINE L2 -1 3312 3257 1179 128 30 60 chr2 206277939 206278173 -46978410 + MER106A DNA MER1_type 1 227 -9 536 276 47 31 chr2 206278329 206278521 -46978062 + MER117 DNA MER1_type 3 197 0 2458 45 14 3 chr2 206278628 206278917 -46977666 + AluY SINE Alu 1 292 -19 1982 133 14 0 chr2 206279087 206279402 -46977181 + AluSx SINE Alu 2 320 0 1286 255 149 24 chr2 206279403 206280180 -46976403 - L1ME3 LINE L1 -37 6133 5315 2273 93 3 37 chr2 206280188 206280509 -46976074 - AluSx SINE Alu -2 310 1 840 150 0 8 chr2 206280526 206280653 -46975930 + FLAM_C SINE Alu 1 126 -17 21 0 0 0 chr2 206280653 206280674 -46975909 + AT_rich Low_complexity Low_complexity 1 21 0 254 307 95 6 chr2 206280691 206280870 -46975713 - L1ME3 LINE L1 -873 5273 5079 4363 44 25 0 chr2 206280922 206281449 -46975134 - L1PA4 LINE L1 -3 6152 5613 1109 127 0 0 chr2 206281449 206281599 -46974984 + AluSc SINE Alu 144 293 -16 25 0 0 0 chr2 206281746 206281771 -46974812 + AT_rich Low_complexity Low_complexity 1 25 0 2130 128 0 16 chr2 206281772 206282084 -46974499 + AluSx SINE Alu 1 307 -5 224 336 0 45 chr2 206282644 206282754 -46973829 + MIR SINE MIR 113 217 -45 2186 123 0 3 chr2 206283984 206284292 -46972291 + AluSx SINE Alu 1 307 -5 2334 62 48 0 chr2 206284904 206285196 -46971387 + AluY SINE Alu 1 306 -5 211 276 17 0 chr2 206285388 206285446 -46971137 - MER5A DNA MER1_type -3 186 128 1682 177 3 19 chr2 206285793 206286110 -46970473 - AluJo SINE Alu 0 312 1 2318 107 7 0 chr2 206286325 206286635 -46969948 + AluSp SINE Alu 1 312 -1 233 169 14 113 chr2 206286666 206286737 -46969846 - MIR SINE MIR -179 83 20 597 279 58 33 chr2 206287373 206287649 -46968934 + L1ME LINE L1 5538 5820 -301 25 31 0 0 chr2 206287935 206287967 -46968616 + AT_rich Low_complexity Low_complexity 1 32 0 918 229 82 95 chr2 206288319 206288866 -46967717 + MER34 LTR ERV1 3 542 0 1921 150 0 14 chr2 206289511 206289805 -46966778 + AluJo SINE Alu 1 290 -22 2282 109 0 0 chr2 206289829 206290131 -46966452 + AluSc SINE Alu 1 302 -7 2156 116 3 0 chr2 206290233 206290536 -46966047 - AluSc SINE Alu -5 304 1 697 208 0 8 chr2 206290754 206290879 -46965704 - FLAM_A SINE Alu -5 128 5 21 0 0 0 chr2 206291030 206291051 -46965532 + AT_rich Low_complexity Low_complexity 1 21 0 2293 99 3 0 chr2 206291648 206291940 -46964643 + AluSp SINE Alu 1 293 -20 8430 121 116 40 chr2 206292019 206293597 -46962986 + pTR5 LTR ERV1 741 2438 0 2474 216 27 14 chr2 206293865 206293938 -46962645 + L1ME4a LINE L1 5024 5095 -1026 1721 173 10 3 chr2 206293938 206294227 -46962356 + AluJb SINE Alu 1 291 -21 2474 216 27 14 chr2 206294227 206294691 -46961892 + L1ME4a LINE L1 5095 5552 -569 2346 98 21 53 chr2 206294691 206294893 -46961690 - THE1B LTR MaLR 0 364 178 2352 97 10 3 chr2 206294893 206295201 -46961382 - AluSg SINE Alu 0 310 1 2346 98 21 53 chr2 206295201 206295374 -46961209 - THE1B LTR MaLR -186 178 1 2474 216 27 14 chr2 206295374 206295627 -46960956 + L1ME4a LINE L1 5552 5800 -321 580 195 23 16 chr2 206295627 206295755 -46960828 + FLAM_C SINE Alu 1 129 -4 2474 216 27 14 chr2 206295755 206296056 -46960527 + L1ME4a LINE L1 5800 6110 -11 357 317 81 0 chr2 206296149 206296272 -46960311 + MIR3 SINE MIR 38 170 -38 2166 87 67 8 chr2 206296416 206296784 -46959799 - LTR7 LTR ERV1 0 450 1 26411 113 7 19 chr2 206296784 206299466 -46957117 - HERVH LTR ERV1 0 7713 5000 7235 43 21 0 chr2 206299466 206300514 -46956069 + L1PA5 LINE L1 5088 6154 0 26411 113 7 19 chr2 206300514 206305366 -46951217 - HERVH LTR ERV1 -2713 5000 1 2258 79 78 5 chr2 206305366 206305733 -46950850 - LTR7 LTR ERV1 0 450 1 1540 123 9 0 chr2 206306126 206306338 -46950245 + AluJb SINE Alu 1 214 -98 514 143 22 22 chr2 206306375 206306466 -46950117 + AluSg/x SINE Alu 207 297 -15 1673 164 14 19 chr2 206306835 206307182 -46949401 - MER4A LTR ERV1 0 664 261 623 136 19 10 chr2 206307178 206307281 -46949302 - MER4A LTR ERV1 -560 104 1 * 1707 156 14 3 chr2 206307849 206308132 -46948451 + AluSx SINE Alu 13 298 -14 525 47 101 0 chr2 206308236 206308384 -46948199 + (TA)n Simple_repeat Simple_repeat 1 163 0 659 200 0 0 chr2 206308414 206308524 -46948059 - FLAM_A SINE Alu -32 110 1 2848 83 0 0 chr2 206308798 206309159 -46947424 - THE1B LTR MaLR -3 361 1 10846 104 20 21 chr2 206309159 206309235 -46947348 - THE1B-int LTR MaLR 0 1580 1505 2114 130 0 0 chr2 206309235 206309557 -46947026 - AluSq SINE Alu 0 322 1 10846 104 20 21 chr2 206309557 206311062 -46945521 - THE1B-int LTR MaLR -75 1505 1 2469 90 61 9 chr2 206311062 206311408 -46945175 - THE1B LTR MaLR 0 364 1 222 189 117 63 chr2 206311705 206311816 -46944767 - L2 LINE L2 -238 3034 2918 195 129 0 0 chr2 206312538 206312569 -46944014 + (TC)n Simple_repeat Simple_repeat 1 31 0 23 0 0 0 chr2 206312882 206312905 -46943678 + AT_rich Low_complexity Low_complexity 1 23 0 2228 93 0 14 chr2 206313406 206313696 -46942887 - AluSc SINE Alu -23 286 1 2167 106 45 0 chr2 206314190 206314482 -46942101 - AluSx SINE Alu -7 305 1 21 36 0 0 chr2 206314573 206314601 -46941982 + AT_rich Low_complexity Low_complexity 1 28 0 487 279 80 32 chr2 206315596 206315847 -46940736 - MARNA DNA Mariner -183 403 141 2004 128 3 7 chr2 206315938 206316262 -46940321 - AluSx SINE Alu 0 323 1 2090 121 30 7 chr2 206316374 206316679 -46939904 - AluJo SINE Alu 0 312 1 1524 164 90 0 chr2 206316712 206316968 -46939615 + AluJb SINE Alu 1 279 -33 2039 125 3 33 chr2 206317032 206317150 -46939433 + AluSx SINE Alu 1 121 -191 2387 77 0 7 chr2 206317150 206317449 -46939134 - AluY SINE Alu -14 297 1 2039 125 3 33 chr2 206317449 206317634 -46938949 + AluSx SINE Alu 121 295 -17 19910 55 10 2 chr2 206317634 206321633 -46934950 + L1PA6 LINE L1 2117 6150 -4 1208 180 54 21 chr2 206321640 206321879 -46934704 + MER21-int LTR ERV1 3889 4135 -56 1588 141 97 21 chr2 206321881 206322171 -46934412 + AluSx SINE Alu 1 312 0 2283 106 0 3 chr2 206322406 206322709 -46933874 + AluSp SINE Alu 1 302 -11 2339 103 0 0 chr2 206322977 206323278 -46933305 + AluSg SINE Alu 1 301 -9 2181 104 26 13 chr2 206323290 206323597 -46932986 + AluSp SINE Alu 1 311 -2 330 250 125 33 chr2 206324068 206324188 -46932395 - MER5A DNA MER1_type 0 189 59 3850 172 62 37 chr2 206324351 206324952 -46931631 + L1MB1 LINE L1 4823 5407 -761 959 100 0 50 chr2 206324952 206325092 -46931491 + FLAM_C SINE Alu 1 133 0 3850 172 62 37 chr2 206325092 206325500 -46931083 + L1MB1 LINE L1 5407 5803 -365 1558 141 52 65 chr2 206325500 206325806 -46930777 + AluJb SINE Alu 5 306 -6 3850 172 62 37 chr2 206325806 206325936 -46930647 + L1MB1 LINE L1 5803 5928 -240 2315 103 3 0 chr2 206325936 206326238 -46930345 + AluSq SINE Alu 1 303 -10 3850 172 62 37 chr2 206326238 206326405 -46930178 + L1MB1 LINE L1 5928 6166 -2 2110 88 3 63 chr2 206326641 206326959 -46929624 - AluSx SINE Alu -13 299 1 1715 123 33 0 chr2 206326982 206327226 -46929357 + AluSx SINE Alu 49 300 -12 1813 186 163 29 chr2 206327248 206327690 -46928893 + MLT1D LTR MaLR 5 505 0 1493 195 3 55 chr2 206328166 206328474 -46928109 - AluJo SINE Alu -20 292 1 2115 116 0 38 chr2 206328687 206329006 -46927577 + AluSx SINE Alu 1 307 -5 2223 139 0 0 chr2 206329188 206329498 -46927085 - AluSx SINE Alu -2 310 1 2076 134 3 0 chr2 206329610 206329902 -46926681 + AluSx SINE Alu 1 293 -19 2229 111 3 7 chr2 206330106 206330404 -46926179 - AluSx SINE Alu -15 297 1 2122 63 77 31 chr2 206330704 206330991 -46925592 - AluSp SINE Alu -13 300 1 515 303 79 6 chr2 206333884 206334062 -46922521 - MIR3 SINE MIR -9 199 9 249 108 0 0 chr2 206334245 206334282 -46922301 + (TTTTC)n Simple_repeat Simple_repeat 2 38 0 2179 100 17 3 chr2 206334292 206334583 -46922000 + AluSq SINE Alu 1 295 -18 2225 86 10 0 chr2 206334906 206335196 -46921387 - AluSp SINE Alu -20 293 1 1330 39 0 6 chr2 206335507 206335663 -46920920 - L1PA4 LINE L1 -3 6152 5998 2121 119 78 85 chr2 206336853 206337062 -46919521 + Tigger2a DNA MER2_type 1 210 -2498 858 137 0 0 chr2 206337062 206337179 -46919404 - FLAM_C SINE Alu -16 117 1 2121 119 78 85 chr2 206337179 206337406 -46919177 + Tigger2a DNA MER2_type 210 434 0 540 129 41 170 chr2 206337406 206337443 -46919140 - MER33 DNA MER1_type -2280 344 304 1626 186 7 17 chr2 206337443 206337734 -46918849 + AluJb SINE Alu 1 288 -24 540 129 41 170 chr2 206337734 206337782 -46918801 - MER33 DNA MER1_type -2320 304 251 2419 86 0 6 chr2 206337782 206338095 -46918488 + AluY SINE Alu 1 311 0 540 129 41 170 chr2 206338095 206338202 -46918381 - MER33 DNA MER1_type -2373 251 176 1807 149 70 0 chr2 206338209 206338537 -46918046 - L1MB7 LINE L1 -20 6164 5814 306 136 0 34 chr2 206338613 206338672 -46917911 - L1MB7 LINE L1 -346 5828 5772 1345 148 10 0 chr2 206338745 206338954 -46917629 - MER2 DNA MER2_type -134 211 1 1824 180 33 17 chr2 206338957 206339319 -46917264 - L1MB7 LINE L1 -404 5780 5413 996 150 83 201 chr2 206339332 206339377 -46917206 - L1MB4 LINE L1 -7 6176 6127 2307 89 0 0 chr2 206339377 206339669 -46916914 - AluY SINE Alu -17 294 3 996 150 83 201 chr2 206339669 206339771 -46916812 - L1MB4 LINE L1 -56 6127 6015 1879 149 4 0 chr2 206339771 206340047 -46916536 + AluSx SINE Alu 1 277 -35 282 75 0 57 chr2 206340047 206340100 -46916483 + AluSx SINE Alu 253 302 0 2180 121 0 3 chr2 206340103 206340408 -46916175 + AluSx SINE Alu 1 304 -8 996 150 83 201 chr2 206340408 206340674 -46915909 - L1MB4 LINE L1 -169 6014 5760 400 119 30 0 chr2 206340700 206340767 -46915816 - HY5 scRNA scRNA -15 69 1 382 92 92 0 chr2 206340770 206340835 -46915748 - L1MB4 LINE L1 -742 5436 5366 1752 154 0 7 chr2 206340842 206341115 -46915468 - AluSx SINE Alu -23 289 19 536 204 19 9 chr2 206341115 206341223 -46915360 - MER33 DNA MER1_type -203 121 13 2847 16 0 0 chr2 206342194 206342505 -46914078 - AluYa5 SINE Alu 0 311 1 1962 172 3 0 chr2 206342942 206343250 -46913333 + AluSx SINE Alu 1 309 -3 25 51 0 0 chr2 206343795 206343834 -46912749 + AT_rich Low_complexity Low_complexity 1 39 0 558 261 44 6 chr2 206344272 206344452 -46912131 + L1MB7 LINE L1 5545 5731 -390 2065 137 3 0 chr2 206344525 206344825 -46911758 + AluSx SINE Alu 1 301 -11 278 307 343 0 chr2 206345489 206345629 -46910954 + MER91A DNA MER1_type 1 188 -8 2230 104 0 26 chr2 206346065 206346372 -46910211 + AluSc SINE Alu 1 299 -10 876 134 0 63 chr2 206347101 206347243 -46909340 + FLAM_C SINE Alu 1 133 0 2384 95 13 0 chr2 206347247 206347553 -46909030 + AluSg SINE Alu 1 310 0 1681 165 0 4 chr2 206347662 206347929 -46908654 + AluJb SINE Alu 25 290 -22 1571 200 4 0 chr2 206347973 206348253 -46908330 + AluJo SINE Alu 30 310 -2 1331 164 0 0 chr2 206348896 206349104 -46907479 - AluJb SINE Alu -6 306 99 760 197 78 88 chr2 206349128 206349300 -46907283 + L1MB7 LINE L1 5902 6071 -113 2190 108 0 10 chr2 206349300 206349605 -46906978 + AluSc SINE Alu 1 302 -7 760 197 78 88 chr2 206349605 206349716 -46906867 + L1MB7 LINE L1 6071 6182 -2 22 56 0 0 chr2 206349769 206349805 -46906778 + AT_rich Low_complexity Low_complexity 1 36 0 2340 92 10 0 chr2 206350396 206350700 -46905883 - AluSq SINE Alu -6 307 1 2182 128 3 0 chr2 206351029 206351325 -46905258 - AluSx SINE Alu -15 297 1 1495 166 19 58 chr2 206351434 206351747 -46904836 - AluSx SINE Alu -7 305 5 1912 129 25 7 chr2 206351934 206352220 -46904363 + AluSx SINE Alu 1 291 -21 1945 94 79 0 chr2 206352300 206352567 -46904016 + AluSg SINE Alu 1 288 -22 396 147 67 0 chr2 206352568 206352643 -46903940 + L1MDa LINE L1 1563 1642 -4898 924 141 33 94 chr2 206352644 206352799 -46903784 + L1MB3 LINE L1 5984 6124 -59 2532 58 10 0 chr2 206352799 206353107 -46903476 + AluY SINE Alu 1 311 0 924 141 33 94 chr2 206353107 206353164 -46903419 + L1MB3 LINE L1 6124 6183 0 * 1207 220 142 64 chr2 206353160 206353250 -46903333 + L1MDa LINE L1 1631 1713 -4936 1436 167 119 4 chr2 206353250 206353519 -46903064 + AluJo SINE Alu 3 302 -10 1207 220 142 64 chr2 206353519 206353616 -46902967 + L1MDa LINE L1 1713 1801 -4848 1546 173 16 0 chr2 206353616 206353871 -46902712 + AluJo SINE Alu 39 297 -15 2128 122 0 0 chr2 206353877 206354180 -46902403 + AluSg SINE Alu 3 305 -5 1207 220 142 64 chr2 206354180 206354191 -46902392 + L1MDa LINE L1 1805 1814 -4835 2160 104 3 3 chr2 206354191 206354488 -46902095 + AluSc SINE Alu 1 297 -12 2150 138 0 0 chr2 206354491 206354803 -46901780 + AluSx SINE Alu 1 312 0 1207 220 142 64 chr2 206354803 206354875 -46901708 + L1MDa LINE L1 1815 1880 -4769 1935 109 26 53 chr2 206354875 206355177 -46901406 + AluSg SINE Alu 1 294 -16 1207 220 142 64 chr2 206355177 206355226 -46901357 + L1MDa LINE L1 1880 1924 -4725 2538 58 0 6 chr2 206355226 206355538 -46901045 + AluY SINE Alu 1 310 -1 1207 220 142 64 chr2 206355538 206356168 -46900415 + L1MDa LINE L1 1924 2759 -3890 * 3362 232 30 23 chr2 206356154 206357067 -46899516 + L1M4 LINE L1 3794 4712 -1434 631 181 112 9 chr2 206357070 206357186 -46899397 + AluJb SINE Alu 5 132 -180 881 214 9 9 chr2 206357188 206357398 -46899185 + L1M4 LINE L1 4699 4908 -1238 456 92 0 0 chr2 206357389 206357454 -46899129 - L1MB4 LINE L1 -39 6141 6077 * 2045 123 10 10 chr2 206357528 206357837 -46898746 + AluSg SINE Alu 2 310 0 1855 176 60 20 chr2 206357837 206358240 -46898343 + L1 LINE L1 3884 4302 -1844 196 270 16 16 chr2 206358340 206358403 -46898180 + L2 LINE L2 3246 3308 -5 1488 166 97 4 chr2 206358409 206358687 -46897896 - AluJo SINE Alu -6 306 3 2321 67 3 13 chr2 206358781 206359079 -46897504 - AluY SINE Alu -16 295 1 1209 173 40 0 chr2 206359163 206359365 -46897218 + AluJb SINE Alu 84 293 -19 742 187 49 0 chr2 206359367 206359490 -46897093 + FLAM_C SINE Alu 4 132 -11 2188 117 3 7 chr2 206359583 206359890 -46896693 - AluSc SINE Alu -1 308 3 1324 182 108 11 chr2 206359894 206360163 -46896420 - AluJo SINE Alu -17 295 1 768 211 11 65 chr2 206360670 206360855 -46895728 - AluJo SINE Alu -18 294 120 2188 88 25 0 chr2 206361104 206361408 -46895175 - AluSc SINE Alu 0 311 1 26 30 0 0 chr2 206361414 206361447 -46895136 + AT_rich Low_complexity Low_complexity 1 33 0 2380 101 0 0 chr2 206361512 206361819 -46894764 + AluSx SINE Alu 1 307 -5 1576 105 30 38 chr2 206361830 206361970 -46894613 + L1MA2 LINE L1 6037 6176 -128 8706 81 8 1 chr2 206361970 206363033 -46893550 + MER11C LTR ERVK 1 1071 0 1576 105 30 38 chr2 206363033 206363158 -46893425 + L1MA2 LINE L1 6176 6300 -4 939 144 0 0 chr2 206363234 206363366 -46893217 - AluJo SINE Alu -169 133 2 232 270 48 0 chr2 206363488 206363551 -46893032 + L2 LINE L2 3192 3257 -15 1488 98 211 12 chr2 206363712 206363958 -46892625 + AluSc SINE Alu 1 295 -4 368 195 24 73 chr2 206364391 206364473 -46892110 - MER2 DNA MER2_type 0 345 268 1368 167 22 41 chr2 206364530 206364799 -46891784 - MER2 DNA MER2_type -80 265 2 2061 102 0 88 chr2 206364947 206365085 -46891498 + AluSx SINE Alu 1 150 -162 2262 105 0 13 chr2 206365085 206365400 -46891183 + AluY SINE Alu 1 311 0 2061 102 0 88 chr2 206365400 206365583 -46891000 + AluSx SINE Alu 150 293 -19 2230 98 26 7 chr2 206365583 206365888 -46890695 + AluSq SINE Alu 3 313 0 2061 102 0 88 chr2 206365888 206365907 -46890676 + AluSx SINE Alu 293 312 0 2429 70 0 3 chr2 206365983 206366285 -46890298 - AluSq SINE Alu -12 301 1 332 206 48 79 chr2 206366916 206367042 -46889541 + MIR3 SINE MIR 82 203 -5 23 0 0 0 chr2 206367217 206367240 -46889343 + AT_rich Low_complexity Low_complexity 1 23 0 247 208 21 0 chr2 206369276 206369324 -46887259 - L2 LINE L2 -2 3311 3263 1218 138 15 0 chr2 206369410 206369606 -46886977 - MER46B DNA MER2_type 0 236 38 1310 86 0 0 chr2 206369606 206369769 -46886814 + AluSq SINE Alu 1 163 -150 982 131 81 6 chr2 206369770 206369930 -46886653 - MER46B DNA MER2_type -189 47 1 301 136 34 17 chr2 206369883 206369942 -46886641 + MER46A DNA MER2_type 99 158 -78 * 2123 113 0 32 chr2 206370887 206371196 -46885387 + AluSg SINE Alu 1 299 -11 183 293 0 0 chr2 206371201 206371242 -46885341 - L2 LINE L2 -27 3286 3246 1948 144 0 52 chr2 206371479 206371805 -46884778 + AluJo SINE Alu 1 309 -3 2145 85 67 0 chr2 206372169 206372452 -46884131 - AluSc SINE Alu -7 302 1 738 159 16 0 chr2 206372452 206372578 -46884005 - FLAM_C SINE Alu -9 134 7 810 250 17 0 chr2 206372585 206372761 -46883822 - AluJb SINE Alu -15 297 119 266 184 0 0 chr2 206372824 206372873 -46883710 + L2 LINE L2 3188 3236 -36 733 245 129 100 chr2 206373341 206373459 -46883124 + L1MC4a LINE L1 5265 5378 -2430 1781 142 36 4 chr2 206373459 206373733 -46882850 + AluJb SINE Alu 11 293 -19 733 245 129 100 chr2 206373733 206373888 -46882695 + L1MC4a LINE L1 5378 5527 -2281 2161 105 25 0 chr2 206373888 206374198 -46882385 + AluSq SINE Alu 1 317 0 733 245 129 100 chr2 206374198 206374591 -46881992 + L1MC4a LINE L1 5527 5952 -1856 249 190 17 17 chr2 206374594 206374652 -46881931 + (TA)n Simple_repeat Simple_repeat 1 58 0 31 58 0 0 chr2 206374751 206374803 -46881780 + AT_rich Low_complexity Low_complexity 1 52 0 2300 103 0 10 chr2 206375006 206375306 -46881277 + AluSq SINE Alu 1 297 -16 226 261 126 18 chr2 206375504 206375615 -46880968 + L1M4 LINE L1 4711 4833 -1313 517 221 0 0 chr2 206375766 206375870 -46880713 + FLAM_A SINE Alu 24 127 -15 1734 152 7 14 chr2 206375910 206376024 -46880559 + AluJb SINE Alu 22 135 -177 2308 112 0 0 chr2 206376024 206376336 -46880247 + AluSx SINE Alu 1 312 0 1734 152 7 14 chr2 206376336 206376497 -46880086 + AluJb SINE Alu 135 295 -17 991 184 0 0 chr2 206376497 206376660 -46879923 + FRAM SINE Alu 1 160 -16 2284 54 7 4 chr2 206376661 206376939 -46879644 + AluY SINE Alu 28 306 -5 484 164 116 2 chr2 206377693 206377925 -46878658 - AluJb SINE Alu -18 294 1 808 217 71 5 chr2 206378194 206378392 -46878191 + MIR SINE MIR 32 242 -20 456 208 0 23 chr2 206378457 206378587 -46877996 + (TA)n Simple_repeat Simple_repeat 1 127 0 847 132 47 0 chr2 206378588 206378717 -46877866 - AluSg/x SINE Alu -18 294 160 2190 77 31 0 chr2 206378779 206379065 -46877518 + AluY SINE Alu 1 295 -16 678 129 43 80 chr2 206379694 206379747 -46876836 - MER20B DNA MER1_type -370 413 360 1693 166 6 32 chr2 206379747 206380060 -46876523 + AluJb SINE Alu 2 306 -6 678 129 43 80 chr2 206380060 206380169 -46876414 - MER20B DNA MER1_type -423 360 257 275 61 0 0 chr2 206380253 206380286 -46876297 + Alu SINE Alu 9 41 -259 1634 119 4 0 chr2 206380286 206380513 -46876070 + AluSg/x SINE Alu 72 299 -11 21 0 0 0 chr2 206381208 206381229 -46875354 + AT_rich Low_complexity Low_complexity 1 21 0 1071 137 88 6 chr2 206381789 206381971 -46874612 + MER30 DNA MER1_type 1 197 -33 729 140 0 127 chr2 206382130 206382280 -46874303 - FLAM_C SINE Alu -11 132 2 2287 92 0 16 chr2 206382357 206382660 -46873923 - AluSg SINE Alu -12 298 1 810 184 87 16 chr2 206385864 206386076 -46870507 - L1MB3 LINE L1 0 6183 5958 843 117 166 31 chr2 206387218 206387381 -46869202 - AluJo SINE Alu -15 297 113 195 273 0 0 chr2 206387551 206387595 -46868988 + MIR SINE MIR 45 88 -120 1392 155 111 4 chr2 206388401 206388653 -46867930 + AluJo SINE Alu 18 296 -16 2016 111 0 39 chr2 206390018 206390324 -46866259 - AluSx SINE Alu -18 294 1 371 145 0 16 chr2 206390324 206390386 -46866197 - AluSg/x SINE Alu -167 133 73 21 36 0 0 chr2 206490437 206490465 -46766118 + AT_rich Low_complexity Low_complexity 1 28 0 4828 42 2 2 chr2 206490465 206491019 -46765564 - L1PA5 LINE L1 -11 6143 5590 9714 171 75 3 chr2 206491020 206491757 -46764826 - L1PBa LINE L1 -3957 2906 2223 1913 107 10 14 chr2 206491757 206492047 -46764536 - AluSx SINE Alu -6 306 18 9714 171 75 3 chr2 206492047 206492983 -46763600 - L1PBa LINE L1 -4640 2223 1113 1125 169 5 0 chr2 206492976 206493177 -46763406 - L1PBa LINE L1 -6661 202 1 * 818 129 8 0 chr2 206493184 206493316 -46763267 - L1MB5 LINE L1 -346 5828 5696 828 255 80 20 chr2 206493322 206493624 -46762959 + L1ME LINE L1 5436 5755 -407 502 209 151 0 chr2 206493625 206493764 -46762819 - L2 LINE L2 -1521 1793 1634 2430 120 20 0 chr2 206493895 206494237 -46762346 - L1PA15 LINE L1 -13 6152 5804 412 195 52 0 chr2 206494337 206494414 -46762169 - L1 LINE L1 -2492 3654 3574 329 0 24 0 chr2 206494419 206494460 -46762123 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 6327 64 24 48 chr2 206494460 206496454 -46760129 - SVA Other Other -518 1363 1 180 318 45 0 chr2 206496540 206496650 -46759933 + L2 LINE L2 3150 3264 -8 5238 189 110 15 chr2 206496650 206497949 -46758634 - L1 LINE L1 -2560 3586 2164 1015 258 86 83 chr2 206498613 206499306 -46757277 + L1MC/D LINE L1 4335 5025 -1165 7672 61 0 0 chr2 206499306 206500797 -46755786 - L1PA8 LINE L1 0 6172 4687 1015 258 86 83 chr2 206500797 206501006 -46755577 + L1MC/D LINE L1 5025 5232 -958 3853 136 43 15 chr2 206501006 206501174 -46755409 + L1MA5A LINE L1 5621 5783 -514 180 0 0 0 chr2 206501174 206501194 -46755389 + (CA)n Simple_repeat Simple_repeat 1 20 0 3853 136 43 15 chr2 206501194 206501681 -46754902 + L1MA5A LINE L1 5783 6294 -3 1015 258 86 83 chr2 206501681 206501890 -46754693 + L1MC/D LINE L1 5232 5447 -743 1417 199 7 21 chr2 206501897 206502188 -46754395 - L1MB4 LINE L1 -7 6173 5887 506 16 16 0 chr2 206502191 206502254 -46754329 + (TTTTA)n Simple_repeat Simple_repeat 2 65 0 1867 134 4 7 chr2 206502258 206502535 -46754048 - AluSx SINE Alu -36 276 1 1021 218 92 46 chr2 206502545 206502887 -46753696 - MER39 LTR ERV1 -73 629 214 24 32 0 0 chr2 206502911 206502942 -46753641 + AT_rich Low_complexity Low_complexity 1 31 0 4649 199 14 51 chr2 206502942 206503056 -46753527 - L1PB2 LINE L1 -3 6148 6031 1906 122 24 14 chr2 206503056 206503344 -46753239 - AluSx SINE Alu -19 293 3 4649 199 14 51 chr2 206503344 206504648 -46751935 - L1PB2 LINE L1 -120 6031 4783 183 80 0 0 chr2 206504649 206504674 -46751909 + (T)n Simple_repeat Simple_repeat 1 25 0 43118 37 22 2 chr2 206504742 206510773 -46745810 - L1PA2 LINE L1 -1 6154 1 2141 81 3 21 chr2 206510778 206511062 -46745521 - AluSp SINE Alu -34 279 1 3655 187 21 36 chr2 206511066 206511630 -46744953 - L1PB2 LINE L1 -1353 4793 4245 2018 153 0 3 chr2 206511630 206511931 -46744652 - AluSx SINE Alu -1 311 12 3655 187 21 36 chr2 206511931 206512189 -46744394 - L1PB2 LINE L1 -1901 4245 3984 2568 153 47 0 chr2 206512294 206512913 -46743670 - L1P4 LINE L1 -684 5481 4840 288 275 41 29 chr2 206513084 206513255 -46743328 + L1ME3A LINE L1 5793 5965 -205 959 169 73 11 chr2 206513377 206513554 -46743029 - MER5A DNA MER1_type 0 189 2 22 0 0 0 chr2 206513619 206513641 -46742942 + AT_rich Low_complexity Low_complexity 1 22 0 199 377 29 0 chr2 206514163 206514232 -46742351 - L2 LINE L2 -96 3176 3106 220 207 17 0 chr2 206514365 206514423 -46742160 + (CGGGG)n Simple_repeat Simple_repeat 5 63 0 21 0 0 0 chr2 206517199 206517220 -46739363 + AT_rich Low_complexity Low_complexity 1 21 0 402 21 0 0 chr2 206518449 206518496 -46738087 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2240 77 16 21 chr2 206518496 206518864 -46737719 - LTR7 LTR ERV1 -39 411 2 34 55 0 0 chr2 206519914 206519969 -46736614 + AT_rich Low_complexity Low_complexity 1 55 0 215 92 115 0 chr2 206519971 206520058 -46736525 + (TA)n Simple_repeat Simple_repeat 1 97 0 385 264 157 29 chr2 206521541 206521885 -46734698 + L1M4 LINE L1 2110 2497 -3649 985 39 102 8 chr2 206522322 206522449 -46734134 + MER85 DNA T2_type 1 139 0 298 210 37 25 chr2 206522453 206522534 -46734049 - MIR SINE MIR -130 132 51 23 54 0 0 chr2 206523030 206523067 -46733516 + AT_rich Low_complexity Low_complexity 1 37 0 2071 125 10 0 chr2 206523871 206524167 -46732416 - AluSg SINE Alu -11 299 1 26 50 0 0 chr2 206524218 206524258 -46732325 + AT_rich Low_complexity Low_complexity 1 40 0 2250 71 0 3 chr2 206526211 206526546 -46730037 + AluY SINE Alu 1 334 0 1681 103 3 113 chr2 206526559 206526879 -46729704 + AluSg1 SINE Alu 16 300 -9 2266 74 3 16 chr2 206527500 206527809 -46728774 + AluY SINE Alu 7 311 0 447 278 148 6 chr2 206530924 206531093 -46725490 + MIR SINE MIR 59 251 -11 224 305 73 0 chr2 206531336 206531418 -46725165 + MIR3 SINE MIR 120 207 -1 234 239 45 0 chr2 206531805 206531872 -46724711 - MER94 DNA DNA -62 72 3 2173 113 3 3 chr2 206532990 206533291 -46723292 - AluSc SINE Alu -8 301 1 247 150 33 0 chr2 206533624 206533684 -46722899 + (TA)n Simple_repeat Simple_repeat 1 62 0 1943 170 3 0 chr2 206535469 206535775 -46720808 + AluJo SINE Alu 1 307 -5 223 213 27 0 chr2 206535896 206535971 -46720612 + (TA)n Simple_repeat Simple_repeat 1 77 0 42695 35 25 1 chr2 206538091 206544092 -46712491 + L1PA4 LINE L1 2 6152 -3 1061 239 55 9 chr2 206544275 206544602 -46711981 - HAL1 LINE L1 -1035 1472 1131 499 196 185 23 chr2 206544644 206544817 -46711766 + L1MD3 LINE L1 7777 7977 -18 460 257 155 15 chr2 206544914 206545120 -46711463 - HAL1 LINE L1 -1526 981 747 345 199 0 16 chr2 206545149 206545223 -46711360 + MIR SINE MIR 34 106 -102 2030 214 45 19 chr2 206545233 206545747 -46710836 + L1MD3 LINE L1 7459 7985 -10 340 291 53 53 chr2 206545832 206546076 -46710507 - HAL1 LINE L1 -1133 1374 1131 760 134 22 30 chr2 206547372 206547506 -46709077 - FLAM_C SINE Alu 0 133 1 1000 181 0 47 chr2 206548390 206548583 -46708000 - AluJo SINE Alu -17 295 112 654 171 103 0 chr2 206548635 206548752 -46707831 - AluJo SINE Alu -173 129 1 1136 150 21 39 chr2 206549786 206550020 -46706563 + L1MB4 LINE L1 5921 6150 -30 4356 27 0 0 chr2 206550022 206550540 -46706043 - L1PA4 LINE L1 -1407 4739 4222 * 7258 30 7 3 chr2 206550535 206551960 -46704623 + L1PA4 LINE L1 4737 6161 0 182 340 14 35 chr2 206552649 206552753 -46703830 - L2 LINE L2 -935 2379 2277 1373 188 28 16 chr2 206552753 206552937 -46703646 - MER33 DNA MER1_type -2261 324 133 2331 81 10 0 chr2 206552937 206553235 -46703348 - AluY SINE Alu -10 301 1 1373 188 28 16 chr2 206553235 206553370 -46703213 - MER33 DNA MER1_type -2452 133 1 182 340 14 35 chr2 206553370 206553406 -46703177 - L2 LINE L2 -1037 2277 2242 485 325 108 12 chr2 206553493 206553828 -46702755 - L2 LINE L2 -1257 2057 1691 413 304 49 43 chr2 206553809 206553993 -46702590 - MIR SINE MIR -16 246 62 * 342 329 59 39 chr2 206553997 206554353 -46702230 - L2 LINE L2 -1663 1651 1289 21 0 0 0 chr2 206555058 206555079 -46701504 + AT_rich Low_complexity Low_complexity 1 21 0 4529 135 25 25 chr2 206555280 206555746 -46700837 + L1MA9 LINE L1 5500 5968 -344 2344 94 3 0 chr2 206555746 206556043 -46700540 + AluSc SINE Alu 1 298 -11 4529 135 25 25 chr2 206556043 206556383 -46700200 + L1MA9 LINE L1 5967 6306 -6 2409 79 0 0 chr2 206556426 206556730 -46699853 + AluY SINE Alu 1 304 -7 22 35 0 0 chr2 206556821 206556850 -46699733 + AT_rich Low_complexity Low_complexity 1 29 0 895 124 55 0 chr2 206556923 206557068 -46699515 + L1PA10 LINE L1 4769 4921 -1225 * 30625 108 25 55 chr2 206557065 206563416 -46693167 + L1PA7 LINE L1 2 6150 -4 6436 86 17 24 chr2 206563413 206563549 -46693034 + L1PA10 LINE L1 4909 5044 -1137 * 2229 108 0 19 chr2 206563549 206563865 -46692718 + AluSg SINE Alu 1 310 0 6436 86 17 24 chr2 206563865 206565022 -46691561 + L1PA10 LINE L1 5044 6181 0 25 31 0 0 chr2 206565104 206565136 -46691447 + AT_rich Low_complexity Low_complexity 1 32 0 295 162 19 133 chr2 206566208 206566313 -46690270 - MIR SINE MIR -50 212 120 3750 168 50 39 chr2 206566552 206567615 -46688968 + L1MB8 LINE L1 4924 6002 -176 795 169 29 7 chr2 206567621 206567757 -46688826 - MER58A DNA MER1_type 0 142 4 23 33 0 0 chr2 206567885 206567915 -46688668 + AT_rich Low_complexity Low_complexity 1 30 0 5657 239 63 16 chr2 206568123 206569827 -46686756 + L1M2c LINE L1 66 1535 -5314 1521 144 25 35 chr2 206569847 206570132 -46686451 + L1M2c LINE L1 2259 2540 -4309 1302 199 46 4 chr2 206570133 206570374 -46686209 + AluJo SINE Alu 1 251 -61 6016 201 38 15 chr2 206570393 206571159 -46685424 + L1M2c LINE L1 2532 3279 -3569 2290 116 0 0 chr2 206571159 206571469 -46685114 + AluSg SINE Alu 1 310 0 6016 201 38 15 chr2 206571469 206572296 -46684287 + L1M2c LINE L1 3279 4171 -2677 2469 55 13 7 chr2 206572296 206572603 -46683980 + AluY SINE Alu 1 309 -2 6016 201 38 15 chr2 206572603 206572773 -46683810 + L1M2c LINE L1 4171 4336 -2512 4561 117 10 10 chr2 206572784 206573592 -46682991 + L1MA5A LINE L1 5143 5952 -345 621 94 94 0 chr2 206574062 206574168 -46682415 + L1MA5A LINE L1 5936 6051 -246 1949 87 0 4 chr2 206574169 206574435 -46682148 + L1PB1 LINE L1 5885 6149 -2 1684 81 40 0 chr2 206574470 206574718 -46681865 + L1MA5A LINE L1 6038 6295 -2 22 70 0 0 chr2 206574753 206574796 -46681787 + AT_rich Low_complexity Low_complexity 1 43 0 5131 70 49 4 chr2 206574800 206575518 -46681065 - L1PA14 LINE L1 -4 6157 5408 784 253 152 64 chr2 206576525 206576692 -46679891 + L1M2c LINE L1 4532 4683 -2165 919 199 152 5 chr2 206576692 206576883 -46679700 + MER20 DNA MER1_type 1 219 0 784 253 152 64 chr2 206576883 206577670 -46678913 + L1M2c LINE L1 4683 5570 -1278 5586 61 1 1 chr2 206577826 206578548 -46678035 - L1PA5 LINE L1 -2063 4083 3362 10291 47 2 1 chr2 206578548 206580604 -46675979 + L1PA5 LINE L1 4091 6153 -1 606 302 47 0 chr2 206581929 206582098 -46674485 - MER5A DNA MER1_type 0 189 13 245 354 87 55 chr2 206582406 206582844 -46673739 - L2 LINE L2 -12 3301 2850 490 294 19 6 chr2 206582884 206583044 -46673539 - L2 LINE L2 -609 2705 2544 206 291 105 12 chr2 206583500 206583586 -46672997 + MIR SINE MIR 98 191 -71 22 56 0 0 chr2 206584839 206584875 -46671708 + AT_rich Low_complexity Low_complexity 1 36 0 2907 216 41 6 chr2 206585041 206585672 -46670911 - MER82 DNA MER2_type 0 653 1 30 45 0 0 chr2 206586258 206586302 -46670281 + AT_rich Low_complexity Low_complexity 1 44 0 22 0 0 0 chr2 206586649 206586671 -46669912 + AT_rich Low_complexity Low_complexity 1 22 0 243 0 0 0 chr2 206587903 206587930 -46668653 + (CA)n Simple_repeat Simple_repeat 2 28 0 30 59 0 0 chr2 206589663 206589714 -46666869 + AT_rich Low_complexity Low_complexity 1 51 0 698 102 76 0 chr2 206590130 206590248 -46666335 - L1PA13 LINE L1 -11 6152 6026 252 301 24 12 chr2 206590522 206590605 -46665978 + MIR SINE MIR 20 103 -105 26 0 0 0 chr2 206591090 206591116 -46665467 + AT_rich Low_complexity Low_complexity 1 26 0 23 33 0 0 chr2 206591176 206591206 -46665377 + AT_rich Low_complexity Low_complexity 1 30 0 2601 205 90 7 chr2 206591270 206591837 -46664746 + MER90 LTR ERV1 1 614 0 31 0 0 0 chr2 206592022 206592053 -46664530 + AT_rich Low_complexity Low_complexity 1 31 0 814 167 0 0 chr2 206592271 206592403 -46664180 + FLAM_A SINE Alu 2 133 0 573 263 134 5 chr2 206593215 206593401 -46663182 + L2 LINE L2 3103 3312 -1 429 20 0 0 chr2 206593484 206593534 -46663049 + (TA)n Simple_repeat Simple_repeat 2 51 0 2151 68 18 7 chr2 206593534 206593812 -46662771 - AluSc SINE Alu -28 281 1 317 284 130 63 chr2 206595152 206595521 -46661062 - L1M2 LINE L1 -5603 1246 338 2105 82 32 3 chr2 206596038 206596320 -46660263 - AluSx SINE Alu -19 293 4 931 107 7 29 chr2 206596350 206596490 -46660093 - AluJb SINE Alu -40 272 136 398 277 76 33 chr2 206596579 206596763 -46659820 - MIR SINE MIR -1 261 70 217 268 0 18 chr2 206597063 206597119 -46659464 - L3b LINE CR1 -235 1348 1294 1349 55 139 0 chr2 206597607 206597809 -46658774 + MER30 DNA MER1_type 1 230 0 204 194 0 0 chr2 206598125 206598161 -46658422 + CT-rich Low_complexity Low_complexity 1 36 0 237 206 32 32 chr2 206598164 206598227 -46658356 - MIR SINE MIR -79 129 67 3871 54 0 14 chr2 206598250 206598746 -46657837 - L1PA6 LINE L1 -6 6148 5660 243 351 58 44 chr2 206598799 206599004 -46657579 - L2 LINE L2 -540 2774 2567 182 296 86 12 chr2 206599434 206599515 -46657068 - L2 LINE L2 -17 3296 3210 186 237 0 34 chr2 206600070 206600129 -46656454 + L2 LINE L2 3257 3313 0 1189 122 70 25 chr2 206600726 206601540 -46655043 - L1MA7 LINE L1 -5 6286 5398 1034 244 146 12 chr2 206601649 206602211 -46654372 + Charlie7 DNA MER1_type 57 725 -1887 234 143 247 0 chr2 206602199 206602276 -46654307 + Charlie7 DNA MER1_type 2415 2510 -102 * 183 363 32 48 chr2 206602498 206602622 -46653961 - L2 LINE L2 -210 3062 2941 309 307 22 66 chr2 206603526 206603754 -46652829 - LTR16B LTR ERVL -222 242 25 598 307 83 30 chr2 206603802 206604376 -46652207 + L1MC4a LINE L1 5275 5826 -533 2237 143 13 21 chr2 206604376 206604754 -46651829 - THE1C LTR MaLR 0 375 1 8892 136 38 29 chr2 206604754 206606320 -46650263 - THE1C-int LTR MaLR 0 1580 1 2062 134 24 24 chr2 206606322 206606695 -46649888 - THE1C LTR MaLR -2 373 1 186 133 0 0 chr2 206606767 206606797 -46649786 + (CATATA)n Simple_repeat Simple_repeat 5 34 0 953 271 134 7 chr2 206607188 206607494 -46649089 - MLT1I LTR MaLR -2 407 63 216 86 0 0 chr2 206608473 206608508 -46648075 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 460 309 15 22 chr2 206610197 206610333 -46646250 + MIR SINE MIR 20 154 -108 553 261 33 108 chr2 206610784 206611090 -46645493 - L2 LINE L2 -10 3303 3021 189 0 0 0 chr2 206611538 206611559 -46645024 + (TG)n Simple_repeat Simple_repeat 1 21 0 25 31 0 0 chr2 206611725 206611757 -46644826 + AT_rich Low_complexity Low_complexity 1 32 0 326 321 170 6 chr2 206612438 206612597 -46643986 + MIR3 SINE MIR 16 200 -8 22 35 0 0 chr2 206612671 206612700 -46643883 + AT_rich Low_complexity Low_complexity 1 29 0 273 57 0 0 chr2 206614009 206614044 -46642539 + (CCG)n Simple_repeat Simple_repeat 3 37 0 21 36 0 0 chr2 206614194 206614222 -46642361 + GC_rich Low_complexity Low_complexity 1 28 0 261 119 0 0 chr2 206615319 206615361 -46641222 + (TATG)n Simple_repeat Simple_repeat 3 44 0 270 0 0 0 chr2 206618913 206618943 -46637640 + (TG)n Simple_repeat Simple_repeat 2 31 0 4654 138 34 5 chr2 206620928 206621695 -46634888 - L1PA16 LINE L1 -21 6145 5357 23 54 0 0 chr2 206622591 206622628 -46633955 + AT_rich Low_complexity Low_complexity 1 37 0 860 278 75 4 chr2 206622717 206622958 -46633625 - MIR SINE MIR 0 262 5 11445 113 29 11 chr2 206623218 206625612 -46630971 + Tigger1 DNA MER2_type 1 2418 0 198 0 0 0 chr2 206625773 206625795 -46630788 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 210 143 0 0 chr2 206626459 206626494 -46630089 + (TG)n Simple_repeat Simple_repeat 2 36 0 665 220 0 8 chr2 206626548 206626680 -46629903 - FLAM_A SINE Alu -1 132 2 24 0 0 0 chr2 206626975 206626999 -46629584 + AT_rich Low_complexity Low_complexity 1 24 0 660 227 8 0 chr2 206627636 206627768 -46628815 - FLAM_A SINE Alu 0 133 1 264 231 0 46 chr2 206628649 206628714 -46627869 - MIR3 SINE MIR -11 197 136 256 279 0 51 chr2 206628897 206628976 -46627607 - MIR SINE MIR -74 188 114 348 24 0 0 chr2 206628986 206629027 -46627556 + (TG)n Simple_repeat Simple_repeat 2 42 0 619 115 0 0 chr2 206629362 206629449 -46627134 - MLT1J LTR MaLR -1 504 418 1024 286 50 38 chr2 206630509 206630929 -46625654 - MLT1J LTR MaLR -50 461 37 644 279 125 34 chr2 206631285 206631582 -46625001 - L3 LINE CR1 -23 1554 1231 884 183 54 21 chr2 206631601 206631787 -46624796 - MIR SINE MIR -3 259 68 276 319 60 54 chr2 206631783 206631949 -46624634 - L3 LINE CR1 -447 1130 964 * 684 145 94 0 chr2 206632173 206632290 -46624293 - FLAM_C SINE Alu -4 129 2 295 277 0 11 chr2 206632482 206632576 -46624007 + MIR SINE MIR 170 262 0 1975 141 0 0 chr2 206633553 206633837 -46622746 + AluJo SINE Alu 21 304 -8 214 405 14 0 chr2 206633866 206633940 -46622643 + L2 LINE L2 3122 3196 -76 448 280 99 40 chr2 206634794 206634981 -46621602 + MIR SINE MIR 3 200 -62 209 246 18 18 chr2 206635870 206635927 -46620656 + L2 LINE L2 3216 3272 0 619 381 86 9 chr2 206635988 206636429 -46620154 + L2 LINE L2 2397 2871 -443 202 190 155 0 chr2 206636481 206636539 -46620044 + MIR SINE MIR 196 262 0 700 159 198 0 chr2 206638133 206638290 -46618293 - MER53 DNA DNA -1 188 1 201 321 12 62 chr2 206638398 206638479 -46618104 - MIR SINE MIR -172 90 14 32 75 0 0 chr2 206638568 206638635 -46617948 + AT_rich Low_complexity Low_complexity 1 67 0 18427 118 9 4 chr2 206639182 206642048 -46614535 + L1PA7 LINE L1 1055 3933 -2213 1160 134 134 0 chr2 206642049 206642235 -46614348 + AluSg1 SINE Alu 1 211 -98 9610 98 9 0 chr2 206642236 206644403 -46612180 + L1PA7 LINE L1 3941 6148 -6 870 179 90 9 chr2 206644408 206644620 -46611963 - L1MB3 LINE L1 -11 6172 5944 456 301 209 0 chr2 206644671 206644877 -46611706 + MIR SINE MIR 2 250 -12 2505 7 0 7 chr2 206645300 206645578 -46611005 + AluYa5 SINE Alu 36 311 0 1140 193 118 26 chr2 206645830 206646100 -46610483 - AluJo SINE Alu -6 296 2 1876 166 21 24 chr2 206648398 206648735 -46607848 - MER1B DNA MER1_type 0 337 2 4145 144 20 49 chr2 206650111 206650900 -46605683 - L1MC2 LINE L1 -8 6336 5571 490 269 51 6 chr2 206652197 206652353 -46604230 + MER117 DNA MER1_type 1 163 -34 1451 238 51 11 chr2 206653220 206653594 -46602989 - L1ME3A LINE L1 -5 6165 5777 230 294 162 44 chr2 206655623 206655759 -46600824 - L2 LINE L2 0 3272 3121 927 94 8 8 chr2 206658375 206658503 -46598080 + AluJo SINE Alu 11 138 -174 23 0 0 0 chr2 206658649 206658672 -46597911 + AT_rich Low_complexity Low_complexity 1 23 0 606 49 0 0 chr2 206659098 206659180 -46597403 + (CA)n Simple_repeat Simple_repeat 2 83 0 402 321 0 23 chr2 206659196 206659327 -46597256 + MIR3 SINE MIR 61 188 -20 337 240 72 113 chr2 206660061 206660334 -46596249 + MER34 LTR ERV1 353 542 0 324 298 81 0 chr2 206661942 206661956 -46594627 + MIR SINE MIR 77 88 -174 3455 140 33 8 chr2 206661956 206662556 -46594027 - L1MB3 LINE L1 0 6183 5569 324 298 81 0 chr2 206662556 206662665 -46593918 + MIR SINE MIR 88 210 -52 266 330 89 54 chr2 206662724 206662948 -46593635 + L2 LINE L2 2914 3145 -127 226 230 20 120 chr2 206663086 206663186 -46593397 + MER5A DNA MER1_type 82 171 -18 343 272 68 0 chr2 206663206 206663309 -46593274 + L2 LINE L2 3161 3270 -2 22 88 0 0 chr2 206663673 206663730 -46592853 + AT_rich Low_complexity Low_complexity 1 57 0 1325 86 0 16 chr2 206666074 206666260 -46590323 + L1PA11 LINE L1 5992 6174 0 289 304 64 16 chr2 206667285 206667410 -46589173 + MIR SINE MIR 20 150 -112 320 318 45 0 chr2 206667506 206667594 -46588989 + MER69 DNA AcHobo 160 251 -975 317 230 69 11 chr2 206667643 206667730 -46588853 + MER69 DNA AcHobo 2431 2522 -4 1338 277 60 24 chr2 206667787 206668272 -46588311 - MLT1H LTR MaLR -2 547 2 187 231 128 51 chr2 206668310 206668388 -46588195 + L2 LINE L2 1353 1436 -1878 1153 189 45 107 chr2 206668620 206668974 -46587609 + MER7A DNA MER2_type 1 330 -16 6182 94 29 0 chr2 206668984 206670073 -46586510 - L1PA13 LINE L1 -19 6144 5047 4694 157 32 37 chr2 206670105 206670950 -46585633 + MER21B LTR ERV1 22 862 -1 380 324 118 55 chr2 206671533 206672009 -46584574 - MLT1K LTR MaLR -2 586 81 184 219 24 0 chr2 206672101 206672142 -46584441 + L2 LINE L2 3264 3305 -8 284 184 92 92 chr2 206672767 206672865 -46583718 + MER94 DNA DNA 4 101 -33 209 217 0 0 chr2 206673441 206673487 -46583096 + T-rich Low_complexity Low_complexity 1 46 0 1860 158 27 0 chr2 206673578 206673870 -46582713 - AluJb SINE Alu -12 300 1 194 318 45 0 chr2 206674183 206674249 -46582334 - MIR SINE MIR -115 147 79 1901 143 14 4 chr2 206674828 206675107 -46581476 + AluJb SINE Alu 1 282 -30 322 289 56 11 chr2 206675212 206675392 -46581191 + AluJo SINE Alu 108 295 -7 656 57 14 50 chr2 206675442 206675583 -46581000 + (TA)n Simple_repeat Simple_repeat 1 136 0 714 258 173 17 chr2 206675889 206676184 -46580399 + LTR16C LTR ERVL 72 412 -79 1539 179 3 52 chr2 206677882 206678189 -46578394 - AluJo SINE Alu -20 292 1 398 338 67 33 chr2 206678396 206678606 -46577977 - MIR SINE MIR -18 244 28 368 260 58 10 chr2 206679799 206679903 -46576680 + MER5A DNA MER1_type 81 189 0 1116 181 18 13 chr2 206680849 206681075 -46575508 - MLT1C LTR MaLR -4 463 237 559 272 103 52 chr2 206681860 206682092 -46574491 + MIR SINE MIR 2 245 -17 22 35 0 0 chr2 206682116 206682145 -46574438 + AT_rich Low_complexity Low_complexity 1 29 0 557 265 48 0 chr2 206682233 206682399 -46574184 - MIR SINE MIR -1 261 88 195 239 45 102 chr2 206683015 206683103 -46573480 - MIR SINE MIR -169 93 11 312 195 69 0 chr2 206683720 206683807 -46572776 - L1ME4a LINE L1 -37 6084 5992 797 222 40 40 chr2 206684193 206684377 -46572206 + L1ME3A LINE L1 5713 5909 -255 2156 131 0 0 chr2 206684377 206684668 -46571915 + AluSx SINE Alu 1 291 -21 797 222 40 40 chr2 206684668 206684738 -46571845 + L1ME3A LINE L1 5909 5977 -187 419 250 32 65 chr2 206684755 206684971 -46571612 + L1ME3A LINE L1 5960 6168 -2 201 74 0 0 chr2 206688007 206688034 -46568549 + (TG)n Simple_repeat Simple_repeat 2 28 0 683 217 138 53 chr2 206688225 206688529 -46568054 + MER102b DNA MER1_type 3 332 -9 360 313 61 0 chr2 206690438 206690537 -46566046 + L2 LINE L2 3143 3247 -25 273 313 119 0 chr2 206690916 206691050 -46565533 + MIR3 SINE MIR 46 195 -13 486 215 45 34 chr2 206691151 206691328 -46565255 - L1MC5 LINE L1 -64 7897 7719 25 31 0 0 chr2 206691461 206691493 -46565090 + AT_rich Low_complexity Low_complexity 1 32 0 1069 277 106 10 chr2 206692197 206692601 -46563982 + L1ME3A LINE L1 5727 6169 -1 432 250 95 17 chr2 206693302 206693441 -46563142 + MIR SINE MIR 5 147 -61 814 262 93 51 chr2 206693492 206693943 -46562640 - MLT1J LTR MaLR -40 471 2 1109 313 76 32 chr2 206694012 206694538 -46562045 + L2 LINE L2 2436 3002 -311 1707 203 96 17 chr2 206694538 206695015 -46561568 - MLT2B2 LTR ERVL 0 515 1 1109 313 76 32 chr2 206695015 206695085 -46561498 + L2 LINE L2 3002 3067 -246 2067 134 0 3 chr2 206695531 206695823 -46560760 + AluSx SINE Alu 22 312 0 327 307 48 39 chr2 206696618 206696927 -46559656 - L1ME4a LINE L1 -1986 5822 5511 961 149 94 0 chr2 206696984 206697165 -46559418 - L1PB4 LINE L1 -7 6149 5952 1718 146 75 0 chr2 206697210 206697490 -46559093 + AluJb SINE Alu 1 301 -11 316 281 12 116 chr2 206697513 206697677 -46558906 - L1ME4a LINE L1 -2404 5404 5258 530 321 101 0 chr2 206697812 206698049 -46558534 + MIR SINE MIR 2 262 0 322 300 77 35 chr2 206698456 206698626 -46557957 - MIR3 SINE MIR 0 208 32 22 0 0 0 chr2 206699197 206699219 -46557364 + AT_rich Low_complexity Low_complexity 1 22 0 456 174 91 0 chr2 206699898 206700019 -46556564 - L1ME4a LINE L1 -16 6105 5974 239 287 0 0 chr2 206700065 206700152 -46556431 + L1MC4 LINE L1 6614 6700 -1342 * 247 205 84 0 chr2 206700121 206700204 -46556379 - L1MC4 LINE L1 -1339 6703 6614 225 326 0 0 chr2 206700206 206700301 -46556282 + L1MC4 LINE L1 6616 6710 -1332 * 302 265 59 53 chr2 206700291 206700461 -46556122 - L1ME4a LINE L1 -253 5868 5698 245 188 62 0 chr2 206700469 206700517 -46556066 - L2 LINE L2 -22 3291 3241 260 225 67 79 chr2 206700727 206700816 -46555767 - MER5A DNA MER1_type -28 161 74 488 271 159 0 chr2 206701155 206701306 -46555277 - MER5A DNA MER1_type 0 189 15 2234 93 27 7 chr2 206702094 206702395 -46554188 + AluSg SINE Alu 1 307 -3 329 253 47 57 chr2 206702885 206703060 -46553523 - MIR SINE MIR -66 142 26 236 189 138 57 chr2 206703159 206703318 -46553265 - MLT1J LTR MaLR -23 488 317 21 82 0 0 chr2 206704767 206704816 -46551767 + AT_rich Low_complexity Low_complexity 1 49 0 421 242 86 32 chr2 206705740 206705926 -46550657 - L1MC5 LINE L1 -66 7895 7700 1216 54 0 12 chr2 206706479 206706646 -46549937 + (TTC)n Simple_repeat Simple_repeat 2 166 0 512 302 26 31 chr2 206706763 206706955 -46549628 + MIR SINE MIR 2 192 -70 21 0 0 0 chr2 206708071 206708092 -46548491 + AT_rich Low_complexity Low_complexity 1 21 0 451 333 104 5 chr2 206708126 206708318 -46548265 + MIR SINE MIR 33 243 -19 519 239 102 36 chr2 206708428 206708595 -46547988 - L2 LINE L2 -16 3297 3120 984 238 179 43 chr2 206708952 206709012 -46547571 + L2 LINE L2 2889 2939 -374 2762 16 0 0 chr2 206709012 206709318 -46547265 - AluY SINE Alu -5 306 1 984 238 179 43 chr2 206709318 206709631 -46546952 + L2 LINE L2 2939 3313 0 21 0 0 0 chr2 206710742 206710763 -46545820 + AT_rich Low_complexity Low_complexity 1 21 0 219 283 193 21 chr2 206711142 206711287 -46545296 - MIR3 SINE MIR -25 183 14 671 235 50 22 chr2 206712537 206712716 -46543867 - MER58A DNA MER1_type -4 220 37 218 321 179 0 chr2 206712735 206712847 -46543736 - MIR3 SINE MIR -49 159 28 2490 48 0 60 chr2 206712855 206713186 -46543397 - AluY SINE Alu 0 311 1 2422 83 0 3 chr2 206713186 206713486 -46543097 - AluSx SINE Alu -13 299 1 7839 79 20 32 chr2 206714468 206716468 -46540115 - L1PA8 LINE L1 -6 6166 4199 1467 93 0 0 chr2 206716475 206716679 -46539904 + L1PA8 LINE L1 3977 4180 -1966 1725 139 12 0 chr2 206716681 206716939 -46539644 - AluSx SINE Alu -2 310 50 713 208 38 66 chr2 206717228 206717411 -46539172 - MER5B DNA MER1_type 0 178 1 294 345 51 5 chr2 206717460 206717657 -46538926 - L2 LINE L2 -778 2536 2331 647 320 99 4 chr2 206717761 206718033 -46538550 - L3 LINE CR1 -88 1489 1192 26 30 0 0 chr2 206718256 206718289 -46538294 + AT_rich Low_complexity Low_complexity 1 33 0 198 167 0 0 chr2 206718762 206718798 -46537785 + T-rich Low_complexity Low_complexity 1 36 0 689 273 46 5 chr2 206719754 206719948 -46536635 - MIR SINE MIR -20 242 41 2036 132 13 10 chr2 206721084 206721387 -46535196 + AluSx SINE Alu 1 304 -8 3335 97 33 9 chr2 206721786 206722333 -46534250 - Tigger4(Zombi) DNA MER2_type 0 2731 2172 914 135 70 0 chr2 206722339 206722495 -46534088 - Tigger4(Zombi) DNA MER2_type -2564 167 1 1773 113 0 0 chr2 206722871 206723101 -46533482 - AluSx SINE Alu -81 231 2 699 122 0 0 chr2 206723101 206723199 -46533384 + MER30 DNA MER1_type 127 224 -6 351 323 23 15 chr2 206723889 206724019 -46532564 + MIR3 SINE MIR 11 141 -67 1830 121 0 12 chr2 206724270 206724527 -46532056 + AluSx SINE Alu 59 312 0 479 339 73 0 chr2 206724528 206724693 -46531890 + MIR3 SINE MIR 19 195 -13 691 261 139 9 chr2 206724788 206725018 -46531565 - MIR SINE MIR -1 261 2 21 36 0 0 chr2 206725480 206725508 -46531075 + AT_rich Low_complexity Low_complexity 1 28 0 1810 158 14 0 chr2 206727194 206727473 -46529110 + AluSx SINE Alu 1 283 -29 328 240 21 31 chr2 206727660 206727756 -46528827 + MIR SINE MIR 46 140 -68 299 186 17 0 chr2 206727941 206728000 -46528583 + MER5A DNA MER1_type 116 175 -14 212 356 58 0 chr2 206728621 206728708 -46527875 - MIR3 SINE MIR -114 94 3 2407 90 0 7 chr2 206729600 206729900 -46526683 + AluSq SINE Alu 1 298 -15 298 178 0 78 chr2 206730249 206730339 -46526244 - L1MC5 LINE L1 -107 7854 7772 180 0 0 0 chr2 206730597 206730617 -46525966 + (T)n Simple_repeat Simple_repeat 1 20 0 274 230 0 14 chr2 206730775 206730849 -46525734 + MIR SINE MIR 180 252 -10 23 0 0 0 chr2 206730869 206730892 -46525691 + AT_rich Low_complexity Low_complexity 1 23 0 923 237 10 5 chr2 206731423 206731630 -46524953 + MER63A DNA MER1_type 1 208 -2 220 328 16 0 chr2 206731836 206731900 -46524683 + MIR SINE MIR 48 112 -150 214 328 84 8 chr2 206731913 206732032 -46524551 - L2 LINE L2 -2 3270 3143 241 259 155 26 chr2 206732068 206732184 -46524399 + MIR SINE MIR 122 252 -10 455 276 79 8 chr2 206733812 206733985 -46522598 - MIR SINE MIR -54 208 18 357 299 19 9 chr2 206734186 206734293 -46522290 - MIR SINE MIR -57 151 44 241 301 24 12 chr2 206735965 206736048 -46520535 - MIR SINE MIR -105 103 20 660 116 74 0 chr2 206736319 206736440 -46520143 + L1PA13 LINE L1 6023 6152 -11 35 54 0 0 chr2 206736851 206736907 -46519676 + AT_rich Low_complexity Low_complexity 1 56 0 1369 95 0 0 chr2 206737007 206737176 -46519407 - AluSx SINE Alu -143 169 1 1413 195 71 40 chr2 206737299 206737750 -46518833 - MLT1C LTR MaLR -2 465 1 215 323 21 0 chr2 206739326 206739419 -46517164 + CT-rich Low_complexity Low_complexity 4 98 0 295 251 60 48 chr2 206739696 206739863 -46516720 - L2 LINE L2 -251 3021 2853 2110 134 29 13 chr2 206740221 206740527 -46516056 + AluJb SINE Alu 1 311 -1 265 246 0 14 chr2 206741432 206741501 -46515082 - MER5C DNA MER1_type 0 324 257 470 214 68 8 chr2 206741637 206741754 -46514829 - MER5C DNA MER1_type -200 124 1 251 185 37 0 chr2 206743053 206743107 -46513476 + GA-rich Low_complexity Low_complexity 4 59 0 2168 116 31 0 chr2 206743658 206743951 -46512632 + AluSx SINE Alu 1 302 -10 393 279 88 34 chr2 206744395 206744542 -46512041 - MIR SINE MIR -42 220 66 390 219 0 0 chr2 206744540 206744622 -46511961 - MIR SINE MIR -132 130 49 * 381 266 48 16 chr2 206745662 206745786 -46510797 + MIR SINE MIR 19 146 -62 2374 93 0 0 chr2 206745797 206746086 -46510497 - AluSx SINE Alu -23 289 1 258 247 11 43 chr2 206746635 206746728 -46509855 - L2 LINE L2 -1 3312 3223 816 299 96 6 chr2 206746825 206747322 -46509261 + L2 LINE L2 2510 3052 -220 826 217 166 0 chr2 206747534 206747751 -46508832 + MIR SINE MIR 6 258 -4 21 0 0 0 chr2 206748679 206748700 -46507883 + AT_rich Low_complexity Low_complexity 1 21 0 404 238 32 95 chr2 206750488 206750677 -46505906 - MER104 DNA MER2_type 0 180 4 260 225 42 14 chr2 206750745 206750816 -46505767 - L2 LINE L2 -218 3054 2982 5171 11 0 0 chr2 206801711 206802325 -46454258 + L1PA2 LINE L1 5373 5986 -169 335 260 103 27 chr2 206802702 206802848 -46453735 + MIR SINE MIR 36 192 -70 816 125 55 0 chr2 206803828 206803956 -46452627 + AluJb SINE Alu 38 172 -140 1220 21 0 0 chr2 206804056 206804200 -46452383 + L1PA2 LINE L1 6008 6151 -4 25 0 0 0 chr2 206805117 206805142 -46451441 + AT_rich Low_complexity Low_complexity 1 25 0 2117 134 7 3 chr2 206805561 206805868 -46450715 - AluSq SINE Alu -5 308 1 192 209 23 0 chr2 206806195 206806238 -46450345 + L2 LINE L2 3193 3236 -36 374 235 0 12 chr2 206806314 206806395 -46450188 - L2 LINE L2 0 3313 3234 351 235 49 29 chr2 206806456 206806558 -46450025 - MIR SINE MIR -1 261 158 245 272 141 0 chr2 206806586 206806678 -46449905 - L2 LINE L2 -256 3057 2953 345 93 19 0 chr2 206806707 206806761 -46449822 - MADE1 DNA Mariner -25 55 1 222 256 174 35 chr2 206807512 206807598 -46448985 - MIR3 SINE MIR -26 182 85 33 73 0 0 chr2 206807682 206807750 -46448833 + AT_rich Low_complexity Low_complexity 1 68 0 219 69 0 0 chr2 206807913 206807942 -46448641 + (TA)n Simple_repeat Simple_repeat 2 30 0 1745 187 0 34 chr2 206808857 206809244 -46447339 - AluJo SINE Alu 0 378 3 23 0 0 0 chr2 206809615 206809638 -46446945 + AT_rich Low_complexity Low_complexity 1 23 0 2066 143 0 34 chr2 206809833 206810219 -46446364 - AluJo SINE Alu 0 377 3 195 261 22 0 chr2 206810308 206810354 -46446229 - L2 LINE L2 -32 3240 3194 498 99 0 0 chr2 206811627 206811698 -46444885 - AluJ/FRAM SINE Alu -10 302 232 382 316 47 57 chr2 206811811 206812023 -46444560 + MIR SINE MIR 15 224 -38 226 164 291 0 chr2 206812179 206812234 -46444349 + MER58A DNA MER1_type 2 72 -35 305 18 439 0 chr2 206812234 206812291 -46444292 + L1MA6 LINE L1 6198 6279 -21 717 220 28 17 chr2 206812296 206812473 -46444110 + MER58A DNA MER1_type 46 224 0 21 36 0 0 chr2 206812944 206812972 -46443611 + AT_rich Low_complexity Low_complexity 1 28 0 1672 184 14 0 chr2 206812972 206813255 -46443328 - AluJo SINE Alu -25 287 1 335 330 106 21 chr2 206813450 206813662 -46442921 - MIR3 SINE MIR -25 183 3 842 211 67 122 chr2 206813788 206814149 -46442434 + MER102b DNA MER1_type 1 341 0 4786 102 21 4 chr2 206814845 206815550 -46441033 - L1PB3 LINE L1 -3 6151 5435 189 0 0 0 chr2 206815780 206815801 -46440782 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 775 142 0 0 chr2 206816196 206816346 -46440237 + AluSg/x SINE Alu 169 318 0 1800 110 64 7 chr2 206817041 206817355 -46439228 - THE1B LTR MaLR 0 355 1 21 0 0 0 chr2 206817531 206817552 -46439031 + AT_rich Low_complexity Low_complexity 1 21 0 1884 151 100 84 chr2 206817587 206818098 -46438485 + MLT2B1 LTR ERVL 2 520 0 1019 53 38 0 chr2 206818675 206818806 -46437777 - L1PA3 LINE L1 0 6155 6020 30 69 0 0 chr2 206818831 206818889 -46437694 + AT_rich Low_complexity Low_complexity 1 58 0 830 248 16 63 chr2 206820437 206820691 -46435892 + MIR SINE MIR 10 251 -11 3997 142 62 61 chr2 206820896 206820998 -46435585 + L1MC3 LINE L1 5310 5410 -2375 246 227 0 0 chr2 206820998 206821042 -46435541 - 5S rRNA rRNA -76 45 2 3997 142 62 61 chr2 206821042 206821796 -46434787 + L1MC3 LINE L1 5410 6210 -1575 2873 148 34 56 chr2 206821810 206822713 -46433870 + L1MC3 LINE L1 6748 7785 0 1704 141 0 64 chr2 206822755 206823052 -46433531 + AluJb SINE Alu 1 278 -34 303 28 0 0 chr2 206823052 206823088 -46433495 + (TC)n Simple_repeat Simple_repeat 1 36 0 1604 193 45 11 chr2 206823108 206823487 -46433096 - LTR37A LTR ERV1 -22 404 13 802 284 55 29 chr2 206823646 206823991 -46432592 + MLT1I LTR MaLR 1 354 -55 843 213 6 12 chr2 206824011 206824175 -46432408 + MIR SINE MIR 41 203 -59 1715 130 121 16 chr2 206824918 206825233 -46431350 - MER7A DNA MER2_type 0 346 1 211 161 32 32 chr2 206825487 206825549 -46431034 + (TAAA)n Simple_repeat Simple_repeat 2 63 0 6518 50 6 117 chr2 206825981 206827055 -46429528 - SVA Other Other 0 1386 433 3351 78 26 65 chr2 206827072 206827874 -46428709 - SVA Other Other -518 868 307 21 0 0 0 chr2 206828234 206828255 -46428328 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr2 206828745 206828768 -46427815 + (TCCC)n Simple_repeat Simple_repeat 3 25 0 606 229 214 55 chr2 206829737 206830214 -46426369 - MLT1F LTR MaLR -2 553 1 651 211 56 0 chr2 206830219 206830380 -46426203 + MER113 DNA MER1_type? 323 492 -29 349 260 48 55 chr2 206831885 206832031 -46424552 + L1ME4a LINE L1 5956 6100 -21 528 175 10 0 chr2 206832187 206832284 -46424299 - MER2 DNA MER2_type -247 98 1 423 138 0 0 chr2 206834575 206834662 -46421921 + (CCAA)n Simple_repeat Simple_repeat 1 87 0 1736 128 15 0 chr2 206835299 206835573 -46421010 - L1PA10 LINE L1 -5 6163 5886 193 308 0 39 chr2 206835633 206835685 -46420898 - L2 LINE L2 -19 3294 3245 1830 79 0 0 chr2 206836186 206836414 -46420169 - AluY SINE Alu 0 311 84 740 122 54 7 chr2 206837704 206837851 -46418732 - L1MA7 LINE L1 -4 6287 6134 5545 103 46 11 chr2 206837858 206838827 -46417756 + L1PA15 LINE L1 5163 6161 -4 4926 160 24 30 chr2 206838828 206840597 -46415986 - L1MA9 LINE L1 -181 6131 4380 464 316 139 25 chr2 206841089 206841406 -46415177 + L2 LINE L2 2297 2649 -665 281 294 24 12 chr2 206841727 206841812 -46414771 - MIR SINE MIR -86 122 37 444 165 64 37 chr2 206842319 206842428 -46414155 + MER5B DNA MER1_type 1 112 -66 1643 157 62 12 chr2 206842428 206842765 -46413818 - MLT1B LTR MaLR 0 390 37 189 0 0 0 chr2 206842768 206842789 -46413794 + (T)n Simple_repeat Simple_repeat 1 21 0 279 198 0 123 chr2 206842824 206842905 -46413678 + MER5B DNA MER1_type 108 178 0 454 226 55 94 chr2 206842915 206843096 -46413487 - MER5B DNA MER1_type -4 174 1 1650 191 28 0 chr2 206844346 206844634 -46411949 - AluJb SINE Alu -16 296 1 312 296 86 20 chr2 206844907 206845059 -46411524 + MER5B DNA MER1_type 1 162 -16 1433 194 37 3 chr2 206845975 206846269 -46410314 + AluJo SINE Alu 1 304 -8 32 67 0 0 chr2 206846300 206846360 -46410223 + AT_rich Low_complexity Low_complexity 1 60 0 233 200 77 0 chr2 206846483 206846548 -46410035 - HAL1 LINE L1 -113 2394 2325 809 203 169 58 chr2 206846788 206847167 -46409416 - HAL1 LINE L1 -446 2061 1641 303 324 14 20 chr2 206847376 206847524 -46409059 - HAL1 LINE L1 -1941 566 420 955 208 29 14 chr2 206847538 206847745 -46408838 + MER63A DNA MER1_type 1 210 0 742 243 43 16 chr2 206848592 206848847 -46407736 + MIR SINE MIR 1 262 0 22 80 0 0 chr2 206848908 206848958 -46407625 + AT_rich Low_complexity Low_complexity 1 50 0 28 48 0 0 chr2 206849539 206849581 -46407002 + AT_rich Low_complexity Low_complexity 1 42 0 606 257 113 115 chr2 206850077 206850338 -46406245 - L2 LINE L2 -1 3312 3051 857 174 105 12 chr2 206850338 206850510 -46406073 - MER5A DNA MER1_type -1 188 1 606 257 113 115 chr2 206850510 206850735 -46405848 - L2 LINE L2 -262 3051 2827 390 236 66 38 chr2 206850813 206850919 -46405664 - MER5B DNA MER1_type -63 115 7 886 302 86 37 chr2 206850926 206851389 -46405194 - L2 LINE L2 -507 2807 2322 254 173 77 0 chr2 206851664 206851716 -46404867 + L2 LINE L2 3217 3272 0 32 26 0 0 chr2 206853727 206853766 -46402817 + AT_rich Low_complexity Low_complexity 1 39 0 1925 131 36 30 chr2 206855704 206856039 -46400544 + THE1B LTR MaLR 27 363 -1 333 274 156 38 chr2 206856057 206856243 -46400340 - MIR SINE MIR 0 262 55 252 370 132 37 chr2 206858209 206858452 -46398131 + L2 LINE L2 2553 2818 -496 2531 72 30 33 chr2 206858536 206858899 -46397684 - L1PA8A LINE L1 -1 6130 5769 3793 57 2 0 chr2 206858933 206859408 -46397175 - L1PA8 LINE L1 -6 6166 5691 3883 67 2 0 chr2 206859418 206860034 -46396549 - L1PA8A LINE L1 -350 5781 5165 1544 94 36 5 chr2 206861275 206861498 -46395085 + MER30 DNA MER1_type 1 230 0 535 279 142 21 chr2 206861702 206861935 -46394648 - MIR SINE MIR 0 262 2 250 294 76 33 chr2 206861949 206862041 -46394542 - MER5A DNA MER1_type 0 189 94 181 243 0 0 chr2 206862092 206862129 -46394454 + MIR SINE MIR 69 105 -103 1368 186 26 55 chr2 206862129 206862473 -46394110 - MLT2D LTR ERVL 0 414 81 350 235 119 126 chr2 206862674 206862951 -46393632 + MER102b DNA MER1_type 67 341 0 264 30 0 0 chr2 206864252 206864285 -46392298 + (GA)n Simple_repeat Simple_repeat 1 33 0 11604 157 32 11 chr2 206865465 206867347 -46389236 - L1MA3 LINE L1 0 7724 5730 180 0 0 0 chr2 206867347 206867367 -46389216 + (TTTTA)n Simple_repeat Simple_repeat 3 22 0 11604 157 32 11 chr2 206867367 206868922 -46387661 - L1MA3 LINE L1 -1994 5730 4210 5653 135 46 2 chr2 206868920 206869851 -46386732 - L1MA3 LINE L1 -6581 984 13 * 1046 56 0 0 chr2 206869859 206869985 -46386598 - AluY SINE Alu -7 304 179 1666 117 0 0 chr2 206870208 206870430 -46386153 - AluSg/x SINE Alu -10 300 79 1880 161 60 6 chr2 206871930 206872247 -46384336 + MER1B DNA MER1_type 4 337 0 987 270 107 13 chr2 206872638 206873012 -46383571 + MLT1I LTR MaLR 1 409 0 1331 148 99 33 chr2 206873018 206873080 -46383503 + MER33 DNA MER1_type 1 57 -2528 1749 224 26 13 chr2 206873080 206873469 -46383114 - MSTD LTR MaLR -2 394 1 1331 148 99 33 chr2 206873469 206873710 -46382873 + MER33 DNA MER1_type 57 324 0 263 339 66 41 chr2 206873710 206873831 -46382752 + L2 LINE L2 3148 3271 -1 248 237 103 37 chr2 206874651 206874823 -46381760 + HAL1b LINE L1 1191 6117 -4 21 71 0 0 chr2 206874921 206874963 -46381620 + AT_rich Low_complexity Low_complexity 1 42 0 1194 300 70 12 chr2 206875558 206876055 -46380528 - L2 LINE L2 -568 2746 2221 2892 13 0 0 chr2 206876590 206876905 -46379678 + AluYb8 SINE Alu 1 315 -3 337 314 209 0 chr2 206876920 206877092 -46379491 - MIR SINE MIR -15 247 40 1577 137 11 48 chr2 206877269 206877539 -46379044 + AluJo SINE Alu 18 277 -35 186 43 0 0 chr2 206877552 206877575 -46379008 + (CAA)n Simple_repeat Simple_repeat 1 23 0 2083 118 14 0 chr2 206878190 206878477 -46378106 - AluSg SINE Alu -19 291 1 317 284 71 8 chr2 206878892 206879019 -46377564 - MLT1L LTR MaLR -59 556 422 3239 121 66 38 chr2 206879830 206879925 -46376658 - MER6A DNA MER2_type -261 604 513 2428 54 0 13 chr2 206879925 206880240 -46376343 + AluY SINE Alu 1 311 0 3239 121 66 38 chr2 206880240 206880731 -46375852 - MER6A DNA MER2_type -352 513 1 203 394 32 37 chr2 206881289 206881477 -46375106 + L2 LINE L2 2721 2907 -407 4126 154 75 21 chr2 206882024 206882835 -46373748 - L1MB3 LINE L1 -42 6141 5287 1531 261 102 2 chr2 206882891 206883362 -46373221 - LTR33 LTR ERVL -3 518 1 377 236 93 76 chr2 206884761 206884986 -46371597 - L2 LINE L2 -1 3312 3084 1553 137 56 35 chr2 206885732 206886074 -46370509 + L1MC2 LINE L1 5987 6335 -9 392 151 0 12 chr2 206887636 206887722 -46368861 + (TG)n Simple_repeat Simple_repeat 2 86 0 767 281 143 24 chr2 206888314 206888691 -46367892 - LTR33 LTR ERVL -81 440 19 193 266 38 13 chr2 206888744 206888823 -46367760 + MIR SINE MIR 180 260 -2 722 168 0 0 chr2 206889735 206889860 -46366723 - L1PA16 LINE L1 0 6166 6042 255 408 8 0 chr2 206890048 206890173 -46366410 - MIR3 SINE MIR -18 190 65 218 140 53 35 chr2 206890535 206890592 -46365991 + MIR SINE MIR 148 205 -57 2460 218 39 25 chr2 206890775 206891123 -46365460 - L1ME3A LINE L1 -5 6165 5803 3655 109 27 2 chr2 206891123 206891636 -46364947 + MER1A DNA MER1_type 1 526 -1 2460 218 39 25 chr2 206891636 206891896 -46364687 - L1ME3A LINE L1 -367 5803 5548 200 259 35 0 chr2 206894570 206894628 -46361955 + CT-rich Low_complexity Low_complexity 3 62 0 225 276 324 9 chr2 206894953 206895058 -46361525 - L2 LINE L2 -1 3271 3134 390 198 0 30 chr2 206895815 206895916 -46360667 + MER53 DNA DNA 1 98 -91 12223 205 40 9 chr2 206897666 206901459 -46355124 - L1MB2 LINE L1 -7 6400 2471 1737 231 78 20 chr2 206901459 206901905 -46354678 - MER70A LTR ERVL 0 472 1 12223 205 40 9 chr2 206901905 206902172 -46354411 - L1MB2 LINE L1 -3936 2471 2214 226 188 21 0 chr2 206902174 206902222 -46354361 + (TA)n Simple_repeat Simple_repeat 2 50 0 278 284 54 0 chr2 206902222 206902308 -46354275 - MER93a LTR ERV1 -27 375 257 508 242 59 23 chr2 206902316 206902535 -46354048 - L1MB2 LINE L1 -4167 2217 1991 554 268 39 28 chr2 206902576 206902755 -46353828 - L1MB2 LINE L1 -5710 593 413 748 271 24 47 chr2 206903751 206904006 -46352577 + MIR SINE MIR 6 254 -8 222 105 0 0 chr2 206904658 206904696 -46351887 + (TCTA)n Simple_repeat Simple_repeat 2 39 0 216 204 429 31 chr2 206905034 206905132 -46351451 - L2 LINE L2 0 3272 3136 590 267 44 6 chr2 206905932 206906158 -46350425 + MIR SINE MIR 4 234 -28 30931 115 10 59 chr2 206907402 206913875 -46342708 + L1PA7 LINE L1 9 6153 -1 2034 118 7 0 chr2 206913954 206914241 -46342342 + AluSp SINE Alu 8 296 -17 302 325 40 46 chr2 206914480 206914631 -46341952 - L1MC4a LINE L1 -1560 6248 6099 478 254 169 0 chr2 206914800 206914977 -46341606 - L1MC4a LINE L1 -1868 5940 5734 303 260 179 0 chr2 206915659 206915782 -46340801 + MER103 DNA DNA 1 145 -21 226 200 67 17 chr2 206915919 206915979 -46340604 - MIR SINE MIR -108 154 92 5631 143 29 19 chr2 206916083 206917105 -46339478 + L1MA8 LINE L1 5256 6288 -3 881 197 4 70 chr2 206917104 206917284 -46339299 + L1MD3 LINE L1 7758 7919 -76 * 1766 174 0 34 chr2 206917284 206917606 -46338977 - AluJo SINE Alu -1 311 1 881 197 4 70 chr2 206917606 206917669 -46338914 + L1MD3 LINE L1 7919 7985 -10 251 111 0 22 chr2 206919124 206919169 -46337414 + (TTCTC)n Simple_repeat Simple_repeat 1 44 0 1757 155 47 24 chr2 206919169 206919465 -46337118 - AluSx SINE Alu -9 303 1 1544 168 16 19 chr2 206919469 206919784 -46336799 - L1PA13 LINE L1 0 6163 5850 557 320 28 28 chr2 206920218 206920465 -46336118 - MIR SINE MIR -1 261 15 1345 206 25 21 chr2 206920722 206921003 -46335580 + AluJo SINE Alu 1 282 -30 23 0 0 0 chr2 206921003 206921026 -46335557 + AT_rich Low_complexity Low_complexity 1 23 0 814 199 7 0 chr2 206921140 206921281 -46335302 - FRAM SINE Alu -28 148 7 180 0 0 0 chr2 206921293 206921313 -46335270 + (T)n Simple_repeat Simple_repeat 1 20 0 31 26 0 0 chr2 206923586 206923624 -46332959 + AT_rich Low_complexity Low_complexity 1 38 0 2713 45 3 0 chr2 206923629 206923960 -46332623 - L1PA5 LINE L1 0 6154 5823 1895 31 0 0 chr2 206923960 206924186 -46332397 + L1PA5 LINE L1 5594 5819 -336 1998 201 142 30 chr2 206924188 206924765 -46331818 - L1MC4 LINE L1 -140 7902 7261 * 2038 209 58 82 chr2 206924748 206925386 -46331197 + L1MC4a LINE L1 6439 7060 -748 2198 95 3 10 chr2 206925386 206925682 -46330901 + AluSx SINE Alu 1 294 -18 2038 209 58 82 chr2 206925682 206925767 -46330816 + L1MC4a LINE L1 7060 7145 -663 567 211 41 14 chr2 206926955 206927102 -46329481 - MER103 DNA DNA -7 159 9 195 42 0 0 chr2 206928478 206928502 -46328081 + (A)n Simple_repeat Simple_repeat 1 24 0 264 331 74 41 chr2 206931100 206931221 -46325362 - L2 LINE L2 -5 3267 3143 297 268 127 44 chr2 206931618 206931947 -46324636 + MLT1L LTR MaLR 133 538 -77 272 317 129 20 chr2 206932193 206932395 -46324188 - L2 LINE L2 -829 2485 2262 21 0 0 0 chr2 206933517 206933538 -46323045 + AT_rich Low_complexity Low_complexity 1 21 0 364 209 54 31 chr2 206934472 206934601 -46321982 - L1ME4a LINE L1 -1 6120 5989 21 0 0 0 chr2 206935402 206935423 -46321160 + AT_rich Low_complexity Low_complexity 1 21 0 1125 233 5 0 chr2 206935874 206936080 -46320503 + MER58A DNA MER1_type 3 209 -15 604 74 49 0 chr2 206936194 206936275 -46320308 + L1P LINE L1 1 85 -6061 1910 167 0 3 chr2 206936378 206936683 -46319900 + AluJb SINE Alu 4 307 -5 330 26 0 0 chr2 206936975 206937014 -46319569 + (TG)n Simple_repeat Simple_repeat 2 40 0 1976 146 0 0 chr2 206937014 206937301 -46319282 - AluSc SINE Alu -22 287 1 1041 190 43 21 chr2 206937995 206938213 -46318370 - MLT1A1 LTR MaLR -9 356 141 2226 134 64 52 chr2 206938213 206938632 -46317951 - MSTB LTR MaLR 0 426 3 543 163 11 0 chr2 206938632 206938724 -46317859 - MLT1A1 LTR MaLR -269 96 4 528 205 0 0 chr2 206941085 206941197 -46315386 - L1MD3 LINE L1 -5 7990 7879 2241 77 6 29 chr2 206941550 206941720 -46314863 - AluSc SINE Alu -5 304 132 195 42 0 0 chr2 206941720 206941744 -46314839 + (TTA)n Simple_repeat Simple_repeat 2 25 0 2384 66 0 7 chr2 206941744 206942033 -46314550 - AluSp SINE Alu -26 287 1 2241 77 6 29 chr2 206942033 206942172 -46314411 - AluSc SINE Alu -175 134 1 1162 237 67 11 chr2 206943043 206943476 -46313107 + LTR33A LTR ERVL 7 523 0 1299 262 31 35 chr2 206943825 206944279 -46312304 + L1 LINE L1 2316 2767 -3379 324 0 0 0 chr2 206945116 206945152 -46311431 + (TC)n Simple_repeat Simple_repeat 2 37 0 318 50 0 0 chr2 206945174 206945214 -46311369 + (GA)n Simple_repeat Simple_repeat 1 40 0 613 264 44 22 chr2 206946295 206946477 -46310106 + MIR SINE MIR 48 233 -29 301 318 202 0 chr2 206947213 206947342 -46309241 - MIR SINE MIR -44 218 64 461 175 62 0 chr2 206947365 206947462 -46309121 + L1ME3A LINE L1 6064 6166 -4 306 294 64 10 chr2 206947868 206948072 -46308511 + L1ME4a LINE L1 5855 6069 -52 29 0 0 0 chr2 206948108 206948137 -46308446 + AT_rich Low_complexity Low_complexity 1 29 0 268 337 11 0 chr2 206948144 206948239 -46308344 + MARNA DNA Mariner 435 530 -56 36 23 0 0 chr2 206948398 206948441 -46308142 + AT_rich Low_complexity Low_complexity 1 43 0 222 118 0 0 chr2 206948614 206948648 -46307935 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 2140 106 3 3 chr2 206951436 206951720 -46304863 - AluSg SINE Alu -26 284 1 284 286 74 74 chr2 206952497 206952686 -46303897 + MER5A DNA MER1_type 1 189 0 706 218 91 12 chr2 206952699 206952864 -46303719 - MER5A DNA MER1_type -11 178 1 255 280 11 43 chr2 206953726 206953819 -46302764 + MIR SINE MIR 12 101 -161 307 246 0 0 chr2 206953869 206953934 -46302649 - L2 LINE L2 -5 3267 3203 234 211 42 56 chr2 206954001 206954072 -46302511 - L2 LINE L2 -55 3258 3189 423 311 263 16 chr2 206955902 206956886 -46299697 + L2 LINE L2 2070 3304 -9 2335 97 3 0 chr2 206956949 206957249 -46299334 - AluSq SINE Alu -12 301 1 199 286 83 12 chr2 206957493 206957577 -46299006 + MIR SINE MIR 45 134 -128 1888 99 0 46 chr2 206958572 206958896 -46297687 + AluSx SINE Alu 14 324 0 1793 162 10 0 chr2 206959028 206959318 -46297265 + AluJo SINE Alu 1 293 -19 24 0 0 0 chr2 206960497 206960521 -46296062 + AT_rich Low_complexity Low_complexity 1 24 0 239 216 181 52 chr2 206960724 206960840 -46295743 - L1ME4a LINE L1 -21 6100 5970 360 0 0 0 chr2 206960917 206960957 -46295626 + (CA)n Simple_repeat Simple_repeat 1 40 0 651 245 31 61 chr2 206960998 206961311 -46295272 - L1ME4a LINE L1 -310 5811 5510 485 322 81 19 chr2 206961538 206961799 -46294784 - L1ME4a LINE L1 -982 5164 4888 25 31 0 0 chr2 206961928 206961960 -46294623 + AT_rich Low_complexity Low_complexity 1 32 0 659 303 42 51 chr2 206961988 206962649 -46293934 - L1ME4a LINE L1 -1695 4451 3797 226 297 83 41 chr2 206962748 206962893 -46293690 - MIR SINE MIR -44 218 68 883 75 0 0 chr2 206964365 206964485 -46292098 + AluY SINE Alu 190 309 -2 216 241 0 19 chr2 206965699 206965753 -46290830 + L2 LINE L2 3215 3267 -5 717 12 0 0 chr2 206967076 206967162 -46289421 + L1PA4 LINE L1 6066 6151 -4 21 0 0 0 chr2 206967162 206967183 -46289400 + AT_rich Low_complexity Low_complexity 1 21 0 840 312 92 14 chr2 206967271 206967707 -46288876 + L2 LINE L2 2001 2470 -844 23 0 0 0 chr2 206968335 206968358 -46288225 + AT_rich Low_complexity Low_complexity 1 23 0 327 83 83 14 chr2 206968691 206968763 -46287820 - L1MB4 LINE L1 -8 6172 6096 237 120 140 20 chr2 206968763 206968813 -46287770 - L1MB4 LINE L1 -45 6135 6080 48 32 0 0 chr2 206969064 206969126 -46287457 + AT_rich Low_complexity Low_complexity 1 62 0 22 0 0 0 chr2 206969220 206969242 -46287341 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr2 206969549 206969579 -46287004 + AT_rich Low_complexity Low_complexity 1 30 0 367 133 22 8 chr2 206970037 206970131 -46286452 - L1MB2 LINE L1 -21 6150 6068 301 292 75 19 chr2 206971989 206972123 -46284460 - MIR SINE MIR -70 192 54 1155 93 13 0 chr2 206972123 206972273 -46284310 + AluSg/x SINE Alu 143 294 -18 1803 176 0 10 chr2 206976160 206976461 -46280122 + AluJb SINE Alu 3 300 -12 259 364 47 8 chr2 206976973 206977102 -46279481 + MIR SINE MIR 81 214 -48 1529 95 23 0 chr2 206977433 206977654 -46278929 + L1MA1 LINE L1 6077 6302 0 1071 271 65 3 chr2 206979307 206979598 -46276985 - MLT1J LTR MaLR -202 309 1 23 86 0 0 chr2 206979641 206979699 -46276884 + AT_rich Low_complexity Low_complexity 1 58 0 274 241 108 48 chr2 206979775 206979941 -46276642 + L1ME4a LINE L1 5513 5688 -433 318 192 10 96 chr2 206980170 206980274 -46276309 + L1ME4a LINE L1 6027 6121 0 2151 95 0 0 chr2 206981227 206981500 -46275083 + AluSx SINE Alu 13 285 -27 711 0 0 0 chr2 206981503 206981582 -46275001 + (TAAAA)n Simple_repeat Simple_repeat 2 80 0 369 264 111 23 chr2 206981582 206981798 -46274785 + L2 LINE L2 2705 2939 -375 201 273 30 0 chr2 206982116 206982182 -46274401 + L2 LINE L2 2825 2892 -421 1034 109 19 0 chr2 206982182 206982338 -46274245 - L1MA6 LINE L1 -26 6274 6116 613 66 22 11 chr2 206982362 206982453 -46274130 - L1MA6 LINE L1 -160 6140 6049 495 313 102 29 chr2 206982459 206982734 -46273849 + L2 LINE L2 3014 3308 -5 2115 164 15 10 chr2 206982898 206983287 -46273296 + L1MC2 LINE L1 5939 6329 -15 198 0 0 0 chr2 206983773 206983795 -46272788 + (TAAA)n Simple_repeat Simple_repeat 4 25 0 2210 110 3 3 chr2 206983869 206984178 -46272405 - AluY SINE Alu -2 309 1 244 281 0 16 chr2 206985313 206985377 -46271206 - L2 LINE L2 -5 3267 3205 288 346 44 22 chr2 206985852 206985988 -46270595 - L2 LINE L2 -2 3270 3132 320 319 74 30 chr2 206988305 206988440 -46268143 + MIR3 SINE MIR 40 180 -28 235 292 77 0 chr2 206990014 206990079 -46266504 - L2 LINE L2 -61 3211 3142 225 265 0 0 chr2 206990833 206990882 -46265701 - L2 LINE L2 0 3313 3265 205 186 0 0 chr2 206991182 206991225 -46265358 + T-rich Low_complexity Low_complexity 1 43 0 411 333 30 0 chr2 206991820 206991952 -46264631 - MIR SINE MIR -81 181 46 631 287 11 5 chr2 206992041 206992240 -46264343 - MIR SINE MIR -25 237 38 447 354 92 48 chr2 206992252 206992842 -46263741 + L3 LINE CR1 951 1566 -11 21 36 0 0 chr2 206993089 206993117 -46263466 + AT_rich Low_complexity Low_complexity 1 28 0 1858 80 15 0 chr2 206993117 206993381 -46263202 - L1MA2 LINE L1 0 6304 6037 5633 112 25 1 chr2 206993861 206995286 -46261297 - L1PA15 LINE L1 -7 6158 4709 342 0 0 0 chr2 206995427 206995465 -46261118 + (TG)n Simple_repeat Simple_repeat 2 39 0 910 288 49 0 chr2 206995826 206996069 -46260514 - MIR SINE MIR 0 262 8 451 222 56 48 chr2 206996141 206996267 -46260316 - L2 LINE L2 -4 3268 3142 418 286 68 87 chr2 206996514 206996780 -46259803 - MIR SINE MIR 0 262 2 2563 105 27 14 chr2 206996815 206997185 -46259398 - THE1C LTR MaLR 0 375 1 338 254 209 40 chr2 206997221 206997398 -46259185 + MIR SINE MIR 56 262 0 1303 181 55 96 chr2 206998897 206999262 -46257321 - MLT1A1 LTR MaLR -13 352 3 207 286 88 55 chr2 206999284 206999375 -46257208 - L3b LINE CR1 -86 1497 1404 41 21 0 0 chr2 206999745 206999793 -46256790 + AT_rich Low_complexity Low_complexity 1 48 0 199 256 311 0 chr2 207000847 207000937 -46255646 + MIR SINE MIR 1 118 -144 756 272 130 13 chr2 207000940 207001266 -46255317 - MLT1I LTR MaLR 0 409 79 223 213 213 0 chr2 207001314 207001389 -46255194 + MIR SINE MIR 172 262 0 561 256 119 6 chr2 207001450 207001618 -46254965 - MIR SINE MIR -75 187 1 211 323 0 0 chr2 207001654 207001719 -46254864 - MIR SINE MIR -13 249 185 21 57 0 0 chr2 207003109 207003144 -46253439 + AT_rich Low_complexity Low_complexity 1 35 0 377 306 82 27 chr2 207003155 207003302 -46253281 - L2 LINE L2 0 3272 3118 258 136 0 0 chr2 207004638 207004682 -46251901 + (TA)n Simple_repeat Simple_repeat 2 45 0 2600 183 25 73 chr2 207004699 207005367 -46251216 - MER92B LTR ERV1 0 636 1 2201 142 26 0 chr2 207005389 207005728 -46250855 - THE1B LTR MaLR -15 349 2 57 28 0 0 chr2 207005730 207005801 -46250782 + AT_rich Low_complexity Low_complexity 1 71 0 328 243 10 39 chr2 207005801 207005904 -46250679 + L1MC4 LINE L1 6604 6703 -1339 186 103 0 0 chr2 207007146 207007175 -46249408 + (T)n Simple_repeat Simple_repeat 1 29 0 194 91 30 0 chr2 207008191 207008224 -46248359 + GA-rich Low_complexity Low_complexity 2 35 0 355 268 62 10 chr2 207008518 207008615 -46247968 + MER91C DNA MER1_type 1 102 -38 291 327 74 30 chr2 207009186 207009450 -46247133 + L2 LINE L2 2766 3052 -220 7437 115 19 0 chr2 207010011 207011554 -46245029 - L1MA2 LINE L1 -3 6301 4731 23 33 0 0 chr2 207012574 207012604 -46243979 + AT_rich Low_complexity Low_complexity 1 30 0 679 298 75 18 chr2 207012616 207012844 -46243739 - MIR SINE MIR 0 262 22 2018 151 3 23 chr2 207013136 207013488 -46243095 + MLT1B LTR MaLR 1 345 -45 1759 130 65 38 chr2 207013499 207013791 -46242792 + MER1B DNA MER1_type 36 335 -4 414 89 0 0 chr2 207013794 207013850 -46242733 + MLT1B LTR MaLR 335 390 0 24 32 0 0 chr2 207014135 207014166 -46242417 + AT_rich Low_complexity Low_complexity 1 31 0 329 341 39 0 chr2 207014459 207014588 -46241995 - L2 LINE L2 -5 3267 3134 879 222 5 24 chr2 207014692 207014904 -46241679 - MER3 DNA MER1_type 0 209 2 1748 173 7 0 chr2 207016447 207016730 -46239853 + AluJb SINE Alu 1 285 -27 228 35 0 0 chr2 207016808 207016837 -46239746 + (TG)n Simple_repeat Simple_repeat 1 29 0 21 57 0 0 chr2 207017235 207017270 -46239313 + AT_rich Low_complexity Low_complexity 1 35 0 5006 137 42 34 chr2 207017959 207018078 -46238505 + MER4D LTR ERV1 1 117 -786 3786 110 86 29 chr2 207018078 207018732 -46237851 - LTR8 LTR ERV1 0 691 1 5006 137 42 34 chr2 207018732 207019507 -46237076 + MER4D LTR ERV1 117 903 0 681 300 8 26 chr2 207019545 207019812 -46236771 + L2 LINE L2 1729 1990 -1324 1353 148 14 9 chr2 207019814 207020031 -46236552 - AluJo SINE Alu -9 303 86 783 309 97 71 chr2 207020031 207020988 -46235595 + L2 LINE L2 1984 2965 -349 295 312 11 0 chr2 207021339 207021432 -46235151 - MIR3 SINE MIR -39 169 76 3490 24 0 0 chr2 207022534 207022948 -46233635 - L1P LINE L1 -874 5272 4859 3662 19 7 0 chr2 207022948 207023363 -46233220 + L1PA2 LINE L1 5726 6154 -1 428 249 32 15 chr2 207023643 207023832 -46232751 + L1MC4 LINE L1 7564 7716 -92 909 213 43 9 chr2 207026035 207026246 -46230337 - MIR SINE MIR 0 262 45 183 354 39 39 chr2 207026988 207027118 -46229465 + MIR SINE MIR 6 135 -127 356 252 33 66 chr2 207027572 207027723 -46228860 + L2 LINE L2 3114 3259 -54 533 277 117 11 chr2 207027727 207027915 -46228668 + MER20B DNA MER1_type 3 210 -573 1776 150 158 11 chr2 207027925 207027996 -46228587 - MSTA LTR MaLR 0 428 369 216 0 0 0 chr2 207027996 207028020 -46228563 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1776 150 158 11 chr2 207028020 207028321 -46228262 - MSTA LTR MaLR -59 369 1 27 0 0 0 chr2 207028357 207028384 -46228199 + AT_rich Low_complexity Low_complexity 1 27 0 2297 101 3 0 chr2 207028699 207028996 -46227587 + AluSp SINE Alu 2 299 -14 986 168 90 4 chr2 207029293 207029537 -46227046 + MER20B DNA MER1_type 515 779 -4 186 250 0 71 chr2 207029543 207029599 -46226984 + L2 LINE L2 3262 3313 0 1426 140 0 0 chr2 207029760 207029967 -46226616 - AluSg/x SINE Alu -14 298 92 23 0 0 0 chr2 207030104 207030127 -46226456 + AT_rich Low_complexity Low_complexity 1 23 0 1590 145 18 14 chr2 207032986 207033269 -46223314 - MER1B DNA MER1_type -55 284 1 896 238 45 16 chr2 207034711 207034955 -46221628 + MIR SINE MIR 12 262 0 283 74 74 0 chr2 207035000 207035054 -46221529 - L1PA8 LINE L1 -3 6169 6112 384 269 29 10 chr2 207035221 207035325 -46221258 + MIR SINE MIR 23 128 -80 279 0 0 0 chr2 207037028 207037059 -46219524 + (TG)n Simple_repeat Simple_repeat 1 31 0 240 35 0 0 chr2 207037061 207037090 -46219493 + (GA)n Simple_repeat Simple_repeat 2 30 0 28 29 0 0 chr2 207037430 207037465 -46219118 + AT_rich Low_complexity Low_complexity 1 35 0 408 298 39 22 chr2 207039496 207039674 -46216909 - L1ME4a LINE L1 -106 6015 5835 334 284 59 93 chr2 207039723 207040012 -46216571 + MER102a DNA MER1_type 34 312 -18 482 213 11 0 chr2 207040047 207040141 -46216442 + FLAM SINE Alu 39 133 -10 618 230 71 87 chr2 207040148 207040457 -46216126 - L1ME4a LINE L1 -299 5822 5519 4404 169 32 12 chr2 207040602 207041606 -46214977 + L1MB7 LINE L1 5149 6176 -8 932 279 71 54 chr2 207041612 207041824 -46214759 + L1MEc LINE L1 1495 1702 -5019 1642 170 92 32 chr2 207041824 207042194 -46214389 - MSTD LTR MaLR -4 392 1 932 279 71 54 chr2 207042194 207042615 -46213968 + L1MEc LINE L1 1702 2139 -4582 948 244 120 4 chr2 207042615 207042889 -46213694 - MER2 DNA MER2_type -1 344 39 3500 241 38 23 chr2 207042993 207044256 -46212327 + L1MEc LINE L1 2545 3825 -2715 584 248 77 34 chr2 207044251 207044549 -46212034 + L1ME1 LINE L1 5851 6161 -5 * 1950 134 7 29 chr2 207044627 207044934 -46211649 + AluSx SINE Alu 3 302 -10 250 319 33 0 chr2 207045408 207045499 -46211084 - MIR SINE MIR -2 260 167 1849 153 4 18 chr2 207045501 207045782 -46210801 + AluJo SINE Alu 1 277 -35 508 111 89 0 chr2 207045782 207045872 -46210711 + MER4A LTR ERV1 1 98 -566 1612 144 160 71 chr2 207045872 207046240 -46210343 + MER4A LTR ERV1 261 661 -3 252 59 0 0 chr2 207046251 207046285 -46210298 + (CAAAAA)n Simple_repeat Simple_repeat 1 34 0 218 173 40 133 chr2 207046285 207046307 -46210276 - MIR SINE MIR -86 176 154 2469 103 22 11 chr2 207046307 207046676 -46209907 + THE1C LTR MaLR 1 373 -2 9683 108 37 53 chr2 207046678 207048285 -46208298 + THE1C-int LTR MaLR 1 1580 0 2434 111 24 14 chr2 207048285 207048656 -46207927 + THE1C LTR MaLR 1 375 0 218 173 40 133 chr2 207048656 207048704 -46207879 - MIR SINE MIR -107 155 109 1087 286 113 31 chr2 207048756 207049242 -46207341 - MLT1G1 LTR MaLR -69 526 1 698 217 0 0 chr2 207049780 207049900 -46206683 - FLAM_A SINE Alu -12 121 2 308 64 21 0 chr2 207050376 207050423 -46206160 + (TA)n Simple_repeat Simple_repeat 2 49 0 220 291 18 9 chr2 207050622 207050732 -46205851 + (TA)n Simple_repeat Simple_repeat 2 112 0 1802 171 36 3 chr2 207050732 207051065 -46205518 - MER2 DNA MER2_type 0 344 1 25 0 0 0 chr2 207051528 207051553 -46205030 + AT_rich Low_complexity Low_complexity 1 25 0 633 92 0 55 chr2 207052788 207052897 -46203686 - AluY SINE Alu -1 310 208 533 315 88 23 chr2 207053002 207053307 -46203276 + L2 LINE L2 2370 2694 -620 631 323 125 22 chr2 207053369 207053862 -46202721 + L2 LINE L2 2713 3308 -5 2068 130 0 0 chr2 207054035 207054320 -46202263 + AluSq SINE Alu 1 285 -28 552 282 57 24 chr2 207056126 207056335 -46200248 + MIR SINE MIR 31 246 -16 207 204 0 0 chr2 207057669 207057713 -46198870 + (CA)n Simple_repeat Simple_repeat 2 45 0 316 241 155 35 chr2 207058056 207058172 -46198411 - MER5B DNA MER1_type -39 139 10 651 189 85 122 chr2 207058580 207058968 -46197615 - MLT1C LTR MaLR 0 390 7 1810 179 16 3 chr2 207061352 207061660 -46194923 + AluJo SINE Alu 1 312 0 314 328 22 23 chr2 207061765 207061935 -46194648 - MIR SINE MIR -61 147 33 295 312 101 22 chr2 207062137 207062275 -46194308 - MIR SINE MIR -77 185 37 325 329 110 27 chr2 207063794 207064131 -46192452 + LTR16A LTR ERVL 86 450 0 1555 182 40 100 chr2 207064665 207065103 -46191480 - L1ME1 LINE L1 -77 6118 5655 676 239 30 0 chr2 207065103 207065270 -46191313 - MER58A DNA MER1_type -4 220 49 1555 182 40 100 chr2 207065270 207065528 -46191055 - L1ME1 LINE L1 -540 5655 5383 2039 107 0 0 chr2 207065528 207065791 -46190792 - AluSg SINE Alu -17 293 31 1555 182 40 100 chr2 207065791 207067011 -46189572 - L1ME1 LINE L1 -812 5383 4991 * 6302 203 19 31 chr2 207067005 207068642 -46187941 - L1 LINE L1 -989 5157 3541 1334 256 49 72 chr2 207068651 207069532 -46187051 - L1MEc LINE L1 -4760 1636 776 2327 228 36 98 chr2 207069564 207070529 -46186054 - L1MEc LINE L1 -5455 941 37 381 169 34 11 chr2 207070863 207070952 -46185631 - MLT1B LTR MaLR -119 271 181 1012 183 0 0 chr2 207071015 207071201 -46185382 - MLT1B LTR MaLR -204 186 1 263 191 11 45 chr2 207071210 207071299 -46185284 + L1MC5 LINE L1 7832 7917 -44 228 271 0 0 chr2 207071414 207071473 -46185110 + (CA)n Simple_repeat Simple_repeat 2 60 0 341 356 61 0 chr2 207071575 207071707 -46184876 + L2 LINE L2 3133 3272 0 1636 141 53 21 chr2 207073586 207073958 -46182625 + MSTA LTR MaLR 1 375 0 737 216 108 0 chr2 207074147 207074378 -46182205 - MLT1F LTR MaLR -4 538 283 725 229 3 34 chr2 207074378 207074664 -46181919 + MER31B LTR ERV1 1 390 -76 346 187 27 0 chr2 207074638 207074713 -46181870 + MER67D LTR ERV1 434 510 -4 * 668 241 45 80 chr2 207074718 207074876 -46181707 - MLT1G LTR MaLR -262 322 196 884 142 0 0 chr2 207074876 207075003 -46181580 + FLAM_C SINE Alu 2 128 -5 668 241 45 80 chr2 207075003 207075179 -46181404 - MLT1G LTR MaLR -388 196 15 290 274 9 38 chr2 207075190 207075296 -46181287 - MLT1L LTR MaLR -21 594 492 616 264 73 51 chr2 207075355 207075670 -46180913 - MLT1L LTR MaLR -240 375 54 244 293 27 13 chr2 207076452 207076527 -46180056 - L2 LINE L2 -10 3262 3187 1595 189 44 14 chr2 207077055 207077352 -46179231 - AluJo SINE Alu -6 306 1 541 236 211 33 chr2 207078183 207078306 -46178277 + L2 LINE L2 2989 3089 -224 4100 159 11 41 chr2 207078306 207079115 -46177468 + LTR1 LTR ERV1 1 785 0 541 236 211 33 chr2 207079115 207079266 -46177317 + L2 LINE L2 3089 3312 -1 436 325 32 7 chr2 207079534 207079688 -46176895 + MIR SINE MIR 15 172 -90 243 273 0 0 chr2 207079835 207079890 -46176693 + CT-rich Low_complexity Low_complexity 1 55 0 24 53 0 0 chr2 207080152 207080190 -46176393 + AT_rich Low_complexity Low_complexity 1 38 0 1494 171 21 56 chr2 207080522 207080861 -46175722 + MLT1A1 LTR MaLR 1 327 -38 414 272 49 49 chr2 207080975 207081159 -46175424 + MIR SINE MIR 65 248 -14 501 238 33 20 chr2 207082391 207082542 -46174041 + MLT1J1 LTR MaLR 17 169 -277 390 209 0 11 chr2 207082606 207082697 -46173886 + MLT2C1 LTR ERVL 1 90 -307 203 88 29 0 chr2 207082697 207082731 -46173852 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 608 202 35 0 chr2 207082735 207082849 -46173734 - FLAM_C SINE Alu -25 118 1 542 199 60 158 chr2 207082849 207083154 -46173429 + MLT2C1 LTR ERVL 80 413 16 2046 124 135 11 chr2 207083154 207083532 -46173051 - MSTA LTR MaLR 0 428 4 9406 145 9 35 chr2 207083535 207085155 -46171428 - MSTA-int LTR MaLR 0 1580 3 2022 109 183 14 chr2 207085157 207085523 -46171060 - MSTA LTR MaLR 0 428 1 542 199 60 158 chr2 207085523 207085576 -46171007 + MLT2C1 LTR ERVL 340 397 0 243 319 52 37 chr2 207085680 207085815 -46170768 + MLT1J2 LTR MaLR 263 399 -51 39923 61 2 5 chr2 207086084 207092239 -46164344 + L1PA5 LINE L1 11 6147 -7 671 348 100 11 chr2 207092373 207092724 -46163859 - L2 LINE L2 -405 2909 2528 401 275 161 71 chr2 207092935 207092986 -46163597 - MLT1J2 LTR MaLR -2 448 403 1253 168 68 71 chr2 207092986 207093326 -46163257 - MER44D DNA MER2_type 0 609 1 401 275 161 71 chr2 207093326 207093685 -46162898 - MLT1J2 LTR MaLR -47 403 1 323 348 101 10 chr2 207093700 207093996 -46162587 - L2 LINE L2 -1060 2254 1932 24 0 0 0 chr2 207094133 207094157 -46162426 + AT_rich Low_complexity Low_complexity 1 24 0 219 179 51 6 chr2 207094325 207094481 -46162102 + (TA)n Simple_repeat Simple_repeat 1 163 0 436 296 100 38 chr2 207094673 207094812 -46161771 + MLT1L LTR MaLR 150 312 -303 656 189 47 8 chr2 207094812 207094939 -46161644 + FLAM_A SINE Alu 2 133 0 436 296 100 38 chr2 207094939 207095039 -46161544 + MLT1L LTR MaLR 312 404 -211 1641 170 54 14 chr2 207095091 207095385 -46161198 - AluJb SINE Alu -6 306 1 189 0 0 0 chr2 207095390 207095411 -46161172 + (T)n Simple_repeat Simple_repeat 1 21 0 299 223 117 48 chr2 207095603 207095706 -46160877 - L2 LINE L2 -4 3309 3200 7595 170 4 13 chr2 207096610 207098101 -46158482 - L1P LINE L1 -1248 4898 3421 808 226 107 19 chr2 207098164 207098520 -46158063 - MER57A LTR ERV1 0 403 43 244 250 14 14 chr2 207098490 207098562 -46158021 - MER93b LTR ERV1 -301 72 1 * 234 0 0 0 chr2 207098652 207098678 -46157905 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 584 304 81 31 chr2 207099013 207099335 -46157248 + MLT1K LTR MaLR 204 541 -47 255 156 0 89 chr2 207099673 207099763 -46156820 + T-rich Low_complexity Low_complexity 1 82 0 468 282 83 63 chr2 207100067 207100429 -46156154 - HAL1 LINE L1 -121 2386 2033 1803 201 16 11 chr2 207100429 207100792 -46155791 - MLT1A1 LTR MaLR 0 365 1 468 282 83 63 chr2 207100792 207101178 -46155405 - HAL1 LINE L1 -474 2033 1623 4365 162 30 52 chr2 207101178 207102161 -46154422 - L1MD1 LINE L1 -1 6241 5281 445 251 45 97 chr2 207102177 207102444 -46154139 - HAL1 LINE L1 -1407 1100 848 1030 203 75 51 chr2 207102451 207102746 -46153837 - Zaphod DNA AcHobo 0 4031 3730 230 148 19 0 chr2 207102762 207102816 -46153767 + (TATAA)n Simple_repeat Simple_repeat 5 59 0 282 173 125 0 chr2 207102837 207102941 -46153642 - Zaphod DNA AcHobo -318 3713 3597 375 288 110 0 chr2 207103040 207103203 -46153380 - Zaphod DNA AcHobo -3850 181 1 369 333 134 39 chr2 207103203 207103434 -46153149 - HAL1 LINE L1 -1660 847 595 3642 137 39 2 chr2 207103852 207104450 -46152133 + Ricksha DNA DNA 8 627 -2619 11021 153 27 39 chr2 207104453 207104939 -46151644 + Ricksha DNA DNA 1057 1548 -1698 2222 109 30 0 chr2 207104939 207105242 -46151341 + AluSx SINE Alu 1 312 0 11021 153 27 39 chr2 207105242 207105712 -46150871 + Ricksha DNA DNA 1548 2022 -1224 2096 117 20 0 chr2 207105712 207106012 -46150571 + AluSg SINE Alu 1 306 -4 11021 153 27 39 chr2 207106012 207106261 -46150322 + Ricksha DNA DNA 2022 2273 -973 2361 100 7 0 chr2 207106261 207106570 -46150013 + AluSq SINE Alu 1 311 -2 11021 153 27 39 chr2 207106570 207107518 -46149065 + Ricksha DNA DNA 2273 3232 -14 3515 34 0 0 chr2 207107518 207107936 -46148647 - L1PA4 LINE L1 0 6155 5738 2296 91 3 3 chr2 207107936 207108233 -46148350 + AluY SINE Alu 1 297 -14 11021 153 27 39 chr2 207108233 207108290 -46148293 + Ricksha DNA DNA 3230 3243 -3 704 282 80 36 chr2 207108298 207108684 -46147899 - LTR33 LTR ERVL -93 428 26 236 316 102 20 chr2 207109246 207109344 -46147239 + MER91C DNA MER1_type 2 107 -33 284 158 123 0 chr2 207109779 207109836 -46146747 + MER5A DNA MER1_type 17 80 -109 375 273 20 0 chr2 207109866 207109965 -46146618 - MER5A DNA MER1_type -22 167 67 207 279 139 0 chr2 207111259 207111338 -46145245 - MIR SINE MIR -112 150 61 876 154 15 0 chr2 207111574 207111704 -46144879 + AluSq/x SINE Alu 1 132 -180 308 102 0 0 chr2 207111707 207111756 -46144827 + Alu SINE Alu 249 297 -5 1761 181 3 3 chr2 207112652 207112955 -46143628 + AluJb SINE Alu 1 303 -9 2138 132 0 3 chr2 207113202 207113505 -46143078 - AluSx SINE Alu -10 302 1 317 294 112 50 chr2 207113538 207113772 -46142811 - L1MC/D LINE L1 -584 5658 5505 23 33 0 0 chr2 207113909 207113939 -46142644 + AT_rich Low_complexity Low_complexity 1 30 0 1750 165 0 61 chr2 207113948 207114276 -46142307 + AluSx SINE Alu 1 308 -4 29 0 0 0 chr2 207114279 207114308 -46142275 + AT_rich Low_complexity Low_complexity 1 29 0 459 257 56 45 chr2 207114378 207114557 -46142026 + MIR SINE MIR 82 262 0 267 31 0 0 chr2 207114773 207114805 -46141778 + (CA)n Simple_repeat Simple_repeat 2 33 0 254 181 56 0 chr2 207115193 207115265 -46141318 - LTR50 LTR ERVL -2 793 718 847 233 155 15 chr2 207115442 207115777 -46140806 - LTR50 LTR ERVL -413 382 1 2209 168 16 19 chr2 207115825 207116254 -46140329 + L1MB2 LINE L1 5742 6169 -2 1744 184 3 7 chr2 207116598 207116891 -46139692 + AluJo SINE Alu 1 292 -20 722 316 98 40 chr2 207117221 207117597 -46138986 - L3b LINE CR1 -57 1526 1129 394 305 90 34 chr2 207118154 207118387 -46138196 - L1MC4a LINE L1 -1810 5998 5753 731 279 135 45 chr2 207118595 207119138 -46137445 + L1M4 LINE L1 3115 3608 -2538 1453 219 31 6 chr2 207119138 207119494 -46137089 - MLT1A1 LTR MaLR 0 365 1 731 279 135 45 chr2 207119494 207120059 -46136524 + L1M4 LINE L1 3608 4323 -1823 391 299 24 55 chr2 207120157 207120267 -46136316 - HAL1b LINE L1 -741 607 495 2142 154 0 0 chr2 207120267 207120579 -46136004 + AluSx SINE Alu 1 312 0 391 299 24 55 chr2 207120579 207120722 -46135861 - HAL1b LINE L1 -853 495 362 29 47 0 0 chr2 207121175 207121218 -46135365 + AT_rich Low_complexity Low_complexity 1 43 0 1125 155 70 5 chr2 207122468 207122668 -46133915 + MER20 DNA MER1_type 3 215 -4 21 89 0 0 chr2 207122761 207122817 -46133766 + AT_rich Low_complexity Low_complexity 1 56 0 2454 136 29 2 chr2 207124721 207125132 -46131451 - MSTA LTR MaLR -6 422 1 267 256 51 51 chr2 207125676 207125754 -46130829 + MER5B DNA MER1_type 94 171 -7 851 248 172 5 chr2 207126754 207127137 -46129446 + LTR33A LTR ERVL 75 521 -2 1063 169 0 11 chr2 207127162 207127339 -46129244 - FAM SINE Alu 0 175 1 249 255 153 66 chr2 207127690 207127886 -46128697 + MLT1K LTR MaLR 95 307 -281 227 277 40 30 chr2 207128055 207128156 -46128427 + MLT1K LTR MaLR 487 588 0 22 35 0 0 chr2 207128324 207128353 -46128230 + AT_rich Low_complexity Low_complexity 1 29 0 730 208 106 25 chr2 207128355 207128600 -46127983 + MER63C DNA MER1_type 260 524 -406 288 278 37 9 chr2 207128634 207128742 -46127841 + LTR33A LTR ERVL 84 194 -329 948 236 10 0 chr2 207128859 207129058 -46127525 + MER58A DNA MER1_type 22 222 -2 1967 201 30 0 chr2 207129059 207129461 -46127122 + MER63C DNA MER1_type 518 931 0 2231 127 3 29 chr2 207129701 207130047 -46126536 + MER1B DNA MER1_type 1 337 0 250 315 135 0 chr2 207130765 207130854 -46125729 + MER5B DNA MER1_type 78 178 0 318 294 66 29 chr2 207130864 207131000 -46125583 - MIR3 SINE MIR -67 141 1 215 200 0 83 chr2 207131455 207131515 -46125068 - MER5A DNA MER1_type -22 167 113 * 237 302 58 0 chr2 207131483 207131569 -46125014 + MER5A DNA MER1_type 56 146 -43 1654 187 27 18 chr2 207133054 207133217 -46123366 - MLT1B LTR MaLR -42 348 188 291 28 0 0 chr2 207133217 207133253 -46123330 + (TG)n Simple_repeat Simple_repeat 2 37 0 1654 187 27 18 chr2 207133253 207133434 -46123149 - MLT1B LTR MaLR -202 188 1 614 321 180 49 chr2 207133683 207134110 -46122473 + L2 LINE L2 729 1099 -2215 2131 184 84 45 chr2 207134110 207134595 -46121988 + MLT1D LTR MaLR 2 505 0 614 321 180 49 chr2 207134595 207134929 -46121654 + L2 LINE L2 1099 1590 -1724 813 214 71 2 chr2 207135184 207135418 -46121165 - L1MD3 LINE L1 0 8040 7805 330 290 194 0 chr2 207135524 207135648 -46120935 + LTR16B LTR ERVL 118 265 -199 438 365 58 12 chr2 207135691 207136017 -46120566 + HERV16 LTR ERVL 11 351 -4645 840 268 98 16 chr2 207136208 207136514 -46120069 + HERV16 LTR ERVL 1943 2273 -2723 1827 196 27 32 chr2 207136701 207137073 -46119510 + MLT1A2 LTR MaLR 1 370 -4 212 0 36 0 chr2 207138059 207138087 -46118496 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1830 142 4 0 chr2 207138097 207138364 -46118219 - AluSx SINE Alu -44 268 1 2338 99 0 6 chr2 207138570 207138882 -46117701 + AluSg SINE Alu 1 310 0 298 340 76 72 chr2 207138950 207139241 -46117342 - L2 LINE L2 -4 3268 2977 180 219 0 24 chr2 207139269 207139310 -46117273 - L2 LINE L2 -3038 276 237 2332 230 22 22 chr2 207139941 207140202 -46116381 - L1MEd LINE L1 -4693 1691 1431 924 242 176 27 chr2 207140202 207140578 -46116005 - MER57B LTR ERV1 -1 433 2 2332 230 22 22 chr2 207140578 207140955 -46115628 - L1MEd LINE L1 -4953 1431 1067 26 0 0 0 chr2 207141840 207141866 -46114717 + AT_rich Low_complexity Low_complexity 1 26 0 211 233 0 0 chr2 207143000 207143043 -46113540 + L2 LINE L2 3271 3313 0 876 108 0 0 chr2 207143592 207143712 -46112871 + THE1B LTR MaLR 196 315 -49 21 36 0 0 chr2 207143717 207143745 -46112838 + AT_rich Low_complexity Low_complexity 1 28 0 437 315 128 44 chr2 207143982 207144322 -46112261 + L2 LINE L2 2855 3229 -43 332 339 177 8 chr2 207144455 207144709 -46111874 - L2 LINE L2 -341 2973 2677 672 266 118 9 chr2 207145218 207145450 -46111133 - MIR SINE MIR -4 258 17 192 372 41 35 chr2 207146373 207146518 -46110065 + L2 LINE L2 2844 2989 -283 235 189 0 0 chr2 207146590 207146627 -46109956 - Charlie8 DNA MER1_type -989 1428 1392 280 294 196 14 chr2 207146939 207147153 -46109430 - MLT1K LTR MaLR -7 581 329 300 244 90 13 chr2 207148130 207148208 -46108375 - MER5B DNA MER1_type -69 109 26 1645 140 70 50 chr2 207148829 207149129 -46107454 - MER1B DNA MER1_type 0 339 34 413 151 8 118 chr2 207149208 207149327 -46107256 - Charlie5 DNA MER1_type -27 2585 2480 33 0 0 0 chr2 207150476 207150509 -46106074 + AT_rich Low_complexity Low_complexity 1 33 0 774 195 0 0 chr2 207150511 207150634 -46105949 - FLAM_C SINE Alu -19 124 2 367 269 60 45 chr2 207150896 207151030 -46105553 - L2 LINE L2 -1 3271 3136 2161 137 108 2 chr2 207151196 207151635 -46104948 - MER1A DNA MER1_type -2 527 1 722 265 0 48 chr2 207152050 207152280 -46104303 + L1MC5 LINE L1 6997 7215 -746 2149 128 7 0 chr2 207152295 207152593 -46103990 + AluSx SINE Alu 1 300 -12 307 302 17 47 chr2 207152683 207152733 -46103850 + L1MC5 LINE L1 7261 7311 -650 1881 154 0 39 chr2 207152733 207153045 -46103538 + AluJb SINE Alu 1 300 -12 307 302 17 47 chr2 207153045 207153166 -46103417 + L1MC5 LINE L1 7311 7427 -534 1472 117 5 0 chr2 207153681 207153916 -46102667 - AluSc SINE Alu 0 318 83 360 230 87 32 chr2 207153958 207154084 -46102499 - MLT1J LTR MaLR -2 509 377 2009 158 3 0 chr2 207154168 207154478 -46102105 + AluSx SINE Alu 1 311 -1 2049 142 3 0 chr2 207154814 207155116 -46101467 - AluSx SINE Alu -9 303 1 1788 179 0 10 chr2 207155756 207156063 -46100520 - AluJb SINE Alu -6 306 3 212 313 94 31 chr2 207156209 207156337 -46100246 + MIR SINE MIR 1 136 -126 233 357 14 0 chr2 207156373 207156443 -46100140 - L2 LINE L2 -33 3239 3169 273 239 0 14 chr2 207156459 207156530 -46100053 - Charlie8 DNA MER1_type -991 1426 1357 196 271 100 29 chr2 207156754 207156824 -46099759 + MIR SINE MIR 7 81 -181 2307 203 45 101 chr2 207156824 207157559 -46099024 - LTR8A LTR ERV1 0 727 34 463 267 22 24 chr2 207157571 207157745 -46098838 + MIR SINE MIR 60 234 -28 2322 120 63 10 chr2 207157764 207158178 -46098405 - LTR23 LTR ERV1 0 467 1 1813 166 58 72 chr2 207158401 207158818 -46097765 + MLT2D LTR ERVL 4 414 0 672 195 58 88 chr2 207158825 207159051 -46097532 + MLT1D LTR MaLR 3 221 -284 2198 119 0 13 chr2 207159082 207159393 -46097190 + AluSx SINE Alu 1 307 -5 2302 108 0 6 chr2 207160102 207160416 -46096167 - AluSq SINE Alu -1 312 1 276 287 23 23 chr2 207160776 207160863 -46095720 - L2 LINE L2 -513 2801 2715 377 298 0 11 chr2 207161838 207161932 -46094651 - L2 LINE L2 -22 3291 3199 218 350 8 17 chr2 207163885 207164005 -46092578 + L3 LINE CR1 695 813 -764 602 286 58 42 chr2 207164850 207165110 -46091473 - L1ME3A LINE L1 -218 5948 5688 479 299 128 28 chr2 207165197 207165448 -46091135 + L2 LINE L2 1715 1990 -1324 2116 169 16 24 chr2 207165449 207165827 -46090756 - MSTD LTR MaLR 0 396 22 419 219 0 0 chr2 207165933 207166015 -46090568 - MER94 DNA DNA -42 92 11 627 323 112 45 chr2 207166051 207166776 -46089807 + L2 LINE L2 2272 3041 -231 344 238 10 20 chr2 207166869 207166970 -46089613 - L1ME4a LINE L1 -76 6045 5946 924 61 0 0 chr2 207167402 207167534 -46089049 + (TC)n Simple_repeat Simple_repeat 1 132 0 251 281 0 0 chr2 207167960 207168017 -46088566 + MER5A DNA MER1_type 39 95 -94 328 298 15 53 chr2 207170356 207170487 -46086096 + L2 LINE L2 2578 2703 -611 2310 84 3 7 chr2 207170528 207170827 -46085756 + AluSx SINE Alu 1 298 -14 288 211 0 0 chr2 207170834 207170905 -46085678 + (CATATA)n Simple_repeat Simple_repeat 2 72 0 4054 147 27 38 chr2 207170906 207171641 -46084942 - L1MB3 LINE L1 -19 6164 5438 435 295 142 40 chr2 207171641 207172132 -46084451 + L2 LINE L2 2702 3257 -56 663 251 90 0 chr2 207173075 207173242 -46083341 - MER5A DNA MER1_type 0 189 8 243 179 149 75 chr2 207173275 207173342 -46083241 - MER5A DNA MER1_type -109 80 9 517 268 166 0 chr2 207173358 207173515 -46083068 + MER5A DNA MER1_type 1 183 -6 329 352 59 13 chr2 207173548 207173784 -46082799 - HAL1 LINE L1 -1380 1127 881 419 321 30 77 chr2 207173799 207174031 -46082552 - MLT1I LTR MaLR -28 381 168 1837 164 3 3 chr2 207174031 207174318 -46082265 + AluJb SINE Alu 13 299 -13 419 321 30 77 chr2 207174318 207174424 -46082159 - MLT1I LTR MaLR -241 168 59 291 190 0 0 chr2 207174570 207174628 -46081955 + (TA)n Simple_repeat Simple_repeat 2 59 0 1838 164 3 0 chr2 207174668 207174960 -46081623 + AluJo SINE Alu 1 293 -19 269 265 41 20 chr2 207175380 207175478 -46081105 - L2 LINE L2 -508 2806 2707 1179 209 75 7 chr2 207175608 207175900 -46080683 - LTR50 LTR ERVL -2 793 482 423 220 8 30 chr2 207176100 207176232 -46080351 - L1M4 LINE L1 -1075 5071 4943 2447 175 7 14 chr2 207176456 207176873 -46079710 + MLT2D LTR ERVL 1 414 0 228 231 0 0 chr2 207177048 207177100 -46079483 - MLT1L LTR MaLR -548 67 16 2559 59 3 3 chr2 207178486 207178793 -46077790 - AluY SINE Alu -4 307 1 246 171 43 0 chr2 207179198 207179268 -46077315 + CT-rich Low_complexity Low_complexity 2 74 0 1120 160 55 27 chr2 207179279 207179535 -46077048 - MER33 DNA MER1_type -56 268 6 1520 202 10 16 chr2 207180067 207180421 -46076162 - AluJo SINE Alu 0 354 3 1828 154 7 7 chr2 207180454 207180746 -46075837 + AluJb SINE Alu 3 294 -18 219 286 143 34 chr2 207181053 207181200 -46075383 + L2 LINE L2 2786 2948 -366 572 247 161 11 chr2 207181210 207181396 -46075187 + MIR SINE MIR 15 228 -34 723 247 40 51 chr2 207181460 207181735 -46074848 + MER46C DNA MER2_type 67 338 0 820 307 108 5 chr2 207181890 207182307 -46074276 + L2 LINE L2 2195 2654 -660 401 302 75 6 chr2 207183090 207183165 -46073418 + L2 LINE L2 3141 3209 -104 270 0 0 0 chr2 207183165 207183195 -46073388 + (TG)n Simple_repeat Simple_repeat 2 31 0 401 302 75 6 chr2 207183195 207183278 -46073305 + L2 LINE L2 3209 3310 -3 288 310 11 0 chr2 207183297 207183384 -46073199 + L2 LINE L2 3137 3224 -48 839 227 17 50 chr2 207184186 207184430 -46072153 - MER115 DNA AcHobo -2 691 456 314 301 119 7 chr2 207184533 207184676 -46071907 - MER115 DNA AcHobo -386 307 149 330 271 114 14 chr2 207184892 207185032 -46071551 - LTR33 LTR ERVL -367 154 1 280 229 0 43 chr2 207185386 207185456 -46071127 - L2 LINE L2 -2 3270 3204 1780 128 14 28 chr2 207185682 207185970 -46070613 + AluJb SINE Alu 1 284 -28 22 0 0 0 chr2 207185988 207186010 -46070573 + AT_rich Low_complexity Low_complexity 1 22 0 234 91 0 0 chr2 207186108 207186141 -46070442 + (A)n Simple_repeat Simple_repeat 1 33 0 317 113 0 28 chr2 207186401 207186472 -46070111 + MER96B DNA MER1_type? 116 184 -233 210 229 48 48 chr2 207186883 207186966 -46069617 - L2 LINE L2 -31 3241 3159 * 272 378 0 67 chr2 207186954 207187134 -46069449 - MIR3 SINE MIR -27 181 14 22 0 0 0 chr2 207187426 207187448 -46069135 + AT_rich Low_complexity Low_complexity 1 22 0 952 178 14 72 chr2 207187612 207187760 -46068823 - AluJb SINE Alu -30 282 148 2370 76 3 3 chr2 207187760 207188062 -46068521 - AluSp SINE Alu -11 302 1 952 178 14 72 chr2 207188062 207188121 -46068462 - AluJb SINE Alu -164 148 87 302 243 54 92 chr2 207188221 207188406 -46068177 - L1MC5 LINE L1 -29 7932 7755 6959 151 27 3 chr2 207188483 207189686 -46066897 + Tigger3b DNA MER2_type 1 1231 0 294 29 0 0 chr2 207189699 207189734 -46066849 + (CA)n Simple_repeat Simple_repeat 2 36 0 1356 231 98 30 chr2 207189753 207190182 -46066401 - MLT2B1 LTR ERVL -62 458 1 208 333 131 0 chr2 207191235 207191334 -46065249 - MIR SINE MIR -71 191 80 1040 133 0 0 chr2 207191484 207191634 -46064949 - AluSx SINE Alu -5 305 156 1055 149 6 12 chr2 207191859 207192020 -46064563 - AluSx SINE Alu -152 160 1 2129 113 10 0 chr2 207192564 207192855 -46063728 + AluSx SINE Alu 1 294 -18 258 292 18 9 chr2 207193728 207193841 -46062742 + (TA)n Simple_repeat Simple_repeat 2 115 0 38 39 0 0 chr2 207194022 207194074 -46062509 + AT_rich Low_complexity Low_complexity 1 52 0 244 287 37 37 chr2 207194075 207194211 -46062372 - L1MC4a LINE L1 -903 6905 6770 1948 100 92 0 chr2 207196006 207196277 -46060306 + AluY SINE Alu 1 296 -15 218 244 24 49 chr2 207196905 207196987 -46059596 - L2 LINE L2 0 3272 3193 185 83 28 0 chr2 207197714 207197750 -46058833 + (TA)n Simple_repeat Simple_repeat 1 37 0 485 160 8 118 chr2 207197769 207197803 -46058780 - MLT2D LTR ERVL -7 407 371 221 57 29 0 chr2 207197803 207197838 -46058745 + (TG)n Simple_repeat Simple_repeat 1 36 0 485 160 8 118 chr2 207197838 207197922 -46058661 - MLT2D LTR ERVL -43 371 302 807 162 123 0 chr2 207197929 207198083 -46058500 - MLT2C2 LTR ERVL -274 190 18 915 144 25 25 chr2 207198661 207198821 -46057762 - AluJb SINE Alu -16 296 137 318 87 0 0 chr2 207200052 207200098 -46056485 + (CA)n Simple_repeat Simple_repeat 1 46 0 1341 161 0 144 chr2 207200270 207200630 -46055953 - MLT1B LTR MaLR 0 390 83 3572 104 21 10 chr2 207200630 207201147 -46055436 - MER1A DNA MER1_type 0 529 7 450 211 0 58 chr2 207201151 207201255 -46055328 - MLT1B LTR MaLR -292 98 1 255 306 0 54 chr2 207201290 207201401 -46055182 + L2 LINE L2 3209 3313 0 505 324 67 21 chr2 207202552 207202790 -46053793 - MIR SINE MIR 0 262 14 525 240 39 56 chr2 207202936 207203115 -46053468 - MER5B DNA MER1_type -2 176 1 183 42 0 0 chr2 207205335 207205359 -46051224 + (TG)n Simple_repeat Simple_repeat 1 24 0 252 0 0 0 chr2 207206796 207206824 -46049759 + (TG)n Simple_repeat Simple_repeat 1 28 0 321 82 0 0 chr2 207206824 207206873 -46049710 + (GA)n Simple_repeat Simple_repeat 2 50 0 343 294 0 0 chr2 207210561 207210653 -46045930 + MIR3 SINE MIR 110 201 -7 224 288 0 15 chr2 207210967 207211033 -46045550 + GA-rich Low_complexity Low_complexity 4 68 0 31 76 0 0 chr2 207212796 207212862 -46043721 + AT_rich Low_complexity Low_complexity 1 66 0 1241 201 69 14 chr2 207214545 207214908 -46041675 - LTR37A LTR ERV1 -5 421 39 279 224 69 0 chr2 207215045 207215103 -46041480 + L2 LINE L2 3251 3312 -1 383 270 24 24 chr2 207217662 207217788 -46038795 + LTR67 LTR ERVL 432 557 0 274 290 172 0 chr2 207217902 207218047 -46038536 + L2 LINE L2 3133 3302 -11 332 337 24 42 chr2 207219116 207219282 -46037301 + MER5A DNA MER1_type 27 189 0 310 337 119 35 chr2 207220116 207220493 -46036090 + MLT1J2 LTR MaLR 20 428 -22 783 280 35 23 chr2 207220695 207220952 -46035631 + MIR SINE MIR 3 262 0 384 257 119 0 chr2 207221003 207221112 -46035471 - MLT1E2 LTR MaLR 0 626 505 201 74 0 0 chr2 207221116 207221143 -46035440 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 1617 144 0 0 chr2 207221154 207221383 -46035200 - AluSx SINE Alu -83 229 1 2322 216 43 4 chr2 207221386 207221871 -46034712 - MLT1E2 LTR MaLR -109 517 14 314 271 54 86 chr2 207221941 207222162 -46034421 - MIR SINE MIR -15 247 34 759 277 4 62 chr2 207222439 207222681 -46033902 - MIR SINE MIR 0 262 35 403 272 136 0 chr2 207224678 207224781 -46031802 - L2 LINE L2 0 3313 3197 664 248 56 0 chr2 207225332 207225493 -46031090 - MIR SINE MIR -28 234 65 372 59 0 0 chr2 207225929 207225980 -46030603 + (TG)n Simple_repeat Simple_repeat 2 52 0 252 0 0 0 chr2 207226370 207226398 -46030185 + (T)n Simple_repeat Simple_repeat 1 28 0 234 0 0 0 chr2 207228787 207228813 -46027770 + (T)n Simple_repeat Simple_repeat 1 26 0 256 298 198 16 chr2 207231473 207231594 -46024989 + MIR3 SINE MIR 4 146 -62 1824 147 0 124 chr2 207231873 207232269 -46024314 + MER7A DNA MER2_type 1 345 -1 347 236 34 22 chr2 207232276 207232365 -46024218 + L1MC4 LINE L1 6614 6703 -1339 345 234 0 43 chr2 207232321 207232415 -46024168 - L1MC4 LINE L1 -1339 6703 6614 * 306 261 0 22 chr2 207232333 207232425 -46024158 + L1MC4 LINE L1 6614 6703 -1339 * 233 97 0 97 chr2 207232465 207232527 -46024056 - L1MC4 LINE L1 -1339 6703 6648 2193 111 0 0 chr2 207232528 207232816 -46023767 - AluSg SINE Alu -22 288 1 507 266 30 76 chr2 207236105 207236368 -46020215 - HAL1 LINE L1 -31 2476 2226 283 231 115 0 chr2 207236430 207236508 -46020075 - HAL1 LINE L1 -493 2014 1928 333 0 0 0 chr2 207236551 207236588 -46019995 + (TG)n Simple_repeat Simple_repeat 2 38 0 315 320 110 0 chr2 207236594 207236794 -46019789 - L2 LINE L2 -1172 2142 1921 243 0 0 0 chr2 207237188 207237215 -46019368 + (CA)n Simple_repeat Simple_repeat 1 27 0 252 246 0 62 chr2 207237938 207238003 -46018580 - L2 LINE L2 0 3272 3212 297 0 0 0 chr2 207238422 207238455 -46018128 + (CA)n Simple_repeat Simple_repeat 2 34 0 2241 99 0 3 chr2 207238461 207238755 -46017828 - AluSq SINE Alu -20 293 1 620 327 109 33 chr2 207239393 207240043 -46016540 - L1MC4 LINE L1 -383 5779 5226 24 0 0 0 chr2 207240079 207240103 -46016480 + AT_rich Low_complexity Low_complexity 1 24 0 433 244 78 0 chr2 207240241 207240356 -46016227 + L2 LINE L2 3190 3313 0 257 106 0 21 chr2 207243719 207243766 -46012817 + (CA)n Simple_repeat Simple_repeat 2 47 0 298 309 110 38 chr2 207244399 207244635 -46011948 + MIR SINE MIR 10 262 0 288 222 0 0 chr2 207244772 207244826 -46011757 - MIR SINE MIR 0 262 209 499 256 137 12 chr2 207244897 207245065 -46011518 - MIR SINE MIR -57 205 17 335 169 96 0 chr2 207245299 207245382 -46011201 + MIR3 SINE MIR 105 195 -13 1036 193 68 14 chr2 207246822 207247029 -46009554 - MER20 DNA MER1_type 0 219 2 183 139 0 0 chr2 207249174 207249210 -46007373 + (TGAA)n Simple_repeat Simple_repeat 3 38 0 31 0 0 0 chr2 207249934 207249965 -46006618 + AT_rich Low_complexity Low_complexity 1 31 0 291 328 129 9 chr2 207255491 207255607 -46000976 - L2 LINE L2 0 3272 3143 310 337 190 4 chr2 207255965 207256088 -46000495 - L2 LINE L2 0 3313 3214 1807 161 0 17 chr2 207256088 207256387 -46000196 - AluJo SINE Alu -18 294 1 310 337 190 4 chr2 207256387 207256521 -46000062 - L2 LINE L2 -99 3214 3008 711 224 47 22 chr2 207258854 207259086 -45997497 - MER20B DNA MER1_type -1 782 545 276 326 23 0 chr2 207259186 207259272 -45997311 + L2 LINE L2 3223 3310 -3 283 250 224 26 chr2 207259615 207259767 -45996816 - MER5A DNA MER1_type -4 185 4 252 122 0 0 chr2 207262770 207262811 -45993772 + (TCCCC)n Simple_repeat Simple_repeat 1 41 0 374 278 110 92 chr2 207265118 207265395 -45991188 + L2 LINE L2 1450 1720 -1594 834 141 0 0 chr2 207265395 207265523 -45991060 - FLAM_A SINE Alu -5 128 1 374 278 110 92 chr2 207265523 207265888 -45990695 + L2 LINE L2 1720 2104 -1210 817 167 0 23 chr2 207265909 207266041 -45990542 - FLAM_C SINE Alu -14 129 1 1027 279 238 26 chr2 207266078 207266799 -45989784 + L2 LINE L2 2158 2725 -588 2409 99 0 0 chr2 207266799 207267103 -45989480 + AluSx SINE Alu 1 304 -8 1027 279 238 26 chr2 207267103 207267341 -45989242 + L2 LINE L2 2725 3312 -1 30 27 0 0 chr2 207267556 207267593 -45988990 + AT_rich Low_complexity Low_complexity 1 37 0 1895 159 0 7 chr2 207268175 207268477 -45988106 - AluJb SINE Alu -12 300 1 242 382 0 0 chr2 207268486 207268575 -45988008 - MIR SINE MIR -118 144 56 490 298 32 13 chr2 207268763 207268921 -45987662 - MIR SINE MIR -32 230 70 896 291 93 15 chr2 207268922 207269255 -45987328 + L2 LINE L2 2952 3310 -3 204 239 0 0 chr2 207269337 207269383 -45987200 + (AATAG)n Simple_repeat Simple_repeat 1 46 0 34 0 0 0 chr2 207270034 207270068 -45986515 + AT_rich Low_complexity Low_complexity 1 34 0 1000 209 51 24 chr2 207270069 207270323 -45986260 - MIR SINE MIR -1 261 1 432 0 0 0 chr2 207270919 207270967 -45985616 + (TCCA)n Simple_repeat Simple_repeat 3 50 0 22 0 0 0 chr2 207272051 207272073 -45984510 + AT_rich Low_complexity Low_complexity 1 22 0 273 259 231 34 chr2 207274272 207274419 -45982164 - MIR SINE MIR -86 176 1 2081 114 7 29 chr2 207274423 207274731 -45981852 - AluSx SINE Alu -11 301 1 200 294 0 39 chr2 207277333 207277384 -45979199 + L2 LINE L2 3137 3185 -87 213 175 0 0 chr2 207277951 207277991 -45978592 + (TA)n Simple_repeat Simple_repeat 2 41 0 1412 169 11 15 chr2 207278702 207278962 -45977621 + AluJo SINE Alu 40 298 -14 525 305 87 7 chr2 207278998 207279211 -45977372 + MIR SINE MIR 30 256 -6 1686 156 10 55 chr2 207281172 207281480 -45975103 - AluSx SINE Alu -18 294 1 1707 143 12 65 chr2 207282012 207282334 -45974249 - AluJo SINE Alu -7 305 1 274 326 47 0 chr2 207282553 207282639 -45973944 - L2 LINE L2 -66 3206 3117 605 236 0 0 chr2 207283089 207283199 -45973384 + FRAM SINE Alu 1 102 -74 534 273 33 33 chr2 207283274 207283457 -45973126 + MIR SINE MIR 80 262 0 1706 191 3 7 chr2 207284273 207284566 -45972017 - AluSx SINE Alu -15 297 6 1058 282 82 37 chr2 207284961 207285357 -45971226 + L2 LINE L2 2137 2514 -799 2043 127 3 19 chr2 207285357 207285671 -45970912 - AluSc SINE Alu 0 309 1 1058 282 82 37 chr2 207285671 207286212 -45970371 + L2 LINE L2 2514 3310 -3 312 315 124 43 chr2 207286395 207286855 -45969728 + MLT1J LTR MaLR 15 511 0 326 317 37 30 chr2 207286856 207287020 -45969563 + L1MC4a LINE L1 5333 5497 -862 326 289 34 27 chr2 207287140 207287289 -45969294 + L1MC4a LINE L1 5723 5872 -1936 2117 100 4 4 chr2 207287395 207287676 -45968907 + AluSq SINE Alu 1 281 -32 429 277 109 70 chr2 207287992 207288505 -45968078 - L2 LINE L2 -1527 1787 1255 255 336 78 23 chr2 207288942 207289070 -45967513 + MIR3 SINE MIR 29 163 -45 264 272 11 65 chr2 207289307 207289399 -45967184 + L2 LINE L2 3168 3254 -18 2472 67 0 10 chr2 207290129 207290441 -45966142 - AluY SINE Alu -2 309 1 1924 191 98 34 chr2 207290807 207291278 -45965305 - MLT1D LTR MaLR -4 501 1 384 279 36 0 chr2 207291603 207291714 -45964869 + L2 LINE L2 2748 2862 -452 425 66 16 0 chr2 207291840 207291901 -45964682 + (CA)n Simple_repeat Simple_repeat 2 63 0 320 254 127 27 chr2 207292084 207292194 -45964389 + L2 LINE L2 3142 3262 -10 21 36 0 0 chr2 207292269 207292297 -45964286 + AT_rich Low_complexity Low_complexity 1 28 0 212 216 0 39 chr2 207293928 207293979 -45962604 + CT-rich Low_complexity Low_complexity 4 52 0 1411 220 99 51 chr2 207294084 207294597 -45961986 - MLT1F LTR MaLR -2 540 3 308 283 11 54 chr2 207294826 207294918 -45961665 + L2 LINE L2 3225 3312 -1 284 250 196 0 chr2 207295008 207295120 -45961463 + MIR SINE MIR 15 148 -114 514 270 13 25 chr2 207298444 207298604 -45957979 + MIR SINE MIR 87 246 -16 327 256 26 42 chr2 207298814 207299005 -45957578 - L1ME4a LINE L1 0 6121 5934 207 204 0 0 chr2 207299036 207299085 -45957498 + (TA)n Simple_repeat Simple_repeat 2 50 0 1079 286 35 27 chr2 207299087 207299569 -45957014 - L1ME4a LINE L1 -151 5970 5485 332 319 74 18 chr2 207300097 207300260 -45956323 + MER5B DNA MER1_type 1 172 -6 309 277 57 35 chr2 207302786 207302927 -45953656 - MLT1L LTR MaLR 0 615 472 583 294 100 48 chr2 207302953 207303192 -45953391 - MLT1L LTR MaLR -266 349 87 1839 169 0 16 chr2 207303192 207303499 -45953084 - AluJb SINE Alu -10 302 1 583 294 100 48 chr2 207303499 207303589 -45952994 - MLT1L LTR MaLR -528 87 3 22 70 0 0 chr2 207303719 207303762 -45952821 + AT_rich Low_complexity Low_complexity 1 43 0 2274 137 101 0 chr2 207304433 207304820 -45951763 + MSTC LTR MaLR 3 428 0 586 216 75 112 chr2 207307970 207308248 -45948335 - MER102a DNA MER1_type -2 328 61 4964 45 2 0 chr2 207308509 207309108 -45947475 - L1PA5 LINE L1 -5 6149 5550 1605 172 0 91 chr2 207309266 207309597 -45946986 - AluJb SINE Alu -11 301 1 2409 99 0 10 chr2 207310004 207310318 -45946265 + AluSx SINE Alu 1 311 -1 198 231 0 0 chr2 207311953 207311992 -45944591 + MIR SINE MIR 59 97 -165 187 300 33 17 chr2 207312238 207312298 -45944285 + MIR3 SINE MIR 137 197 -11 2186 106 0 0 chr2 207312562 207312916 -45943667 - AluY SINE Alu 0 354 1 2215 108 10 3 chr2 207313167 207313474 -45943109 + AluSc SINE Alu 1 309 0 22 0 0 0 chr2 207313474 207313496 -45943087 + AT_rich Low_complexity Low_complexity 1 22 0 2346 99 0 3 chr2 207314505 207314817 -45941766 + AluY SINE Alu 1 311 0 17866 88 4 2 chr2 207315459 207318770 -45937813 - L1PA7 LINE L1 -4 6150 2830 477 252 122 0 chr2 207318785 207318916 -45937667 - MIR SINE MIR -5 257 111 852 154 56 0 chr2 207319083 207319245 -45937338 + L1MA6 LINE L1 6130 6300 0 2184 119 0 10 chr2 207320710 207320737 -45935846 - AluSg SINE Alu -1 309 283 234 0 0 0 chr2 207320737 207320763 -45935820 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 2184 119 0 10 chr2 207320763 207321047 -45935536 - AluSg SINE Alu -27 283 1 1518 144 0 4 chr2 207321052 207321281 -45935302 - AluSx SINE Alu -19 293 66 2318 27 73 0 chr2 207321281 207321582 -45935001 - L1P LINE L1 -4426 1720 1398 618 99 0 0 chr2 207321582 207321663 -45934920 - AluSx SINE Alu -230 82 2 197 195 24 0 chr2 207321898 207321939 -45934644 - L2 LINE L2 -1 3271 3230 264 324 128 20 chr2 207321944 207322194 -45934389 - L2 LINE L2 -2 3270 2994 236 254 0 23 chr2 207323169 207323346 -45933237 + CT-rich Low_complexity Low_complexity 4 176 0 287 144 29 58 chr2 207323663 207323767 -45932816 + (TATAA)n Simple_repeat Simple_repeat 5 105 0 1326 306 63 23 chr2 207323778 207324425 -45932158 - Charlie7 DNA MER1_type -1939 673 1 202 139 0 70 chr2 207326496 207326539 -45930044 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 219 188 0 0 chr2 207327458 207327506 -45929077 + T-rich Low_complexity Low_complexity 1 48 0 925 143 0 0 chr2 207327506 207327639 -45928944 - AluSq/x SINE Alu -180 133 1 423 0 0 0 chr2 207329830 207329877 -45926706 + (TC)n Simple_repeat Simple_repeat 2 48 0 402 21 0 0 chr2 207329876 207329923 -45926660 + (TA)n Simple_repeat Simple_repeat 2 48 0 * 201 74 0 0 chr2 207330051 207330078 -45926505 + (GA)n Simple_repeat Simple_repeat 2 28 0 450 0 0 0 chr2 207330191 207330241 -45926342 + (TA)n Simple_repeat Simple_repeat 1 50 0 959 147 11 17 chr2 207330669 207330846 -45925737 - MER51A LTR ERV1 -406 228 53 1890 166 0 0 chr2 207381012 207381319 -45875264 - AluJb SINE Alu 0 312 6 21 0 0 0 chr2 207382639 207382660 -45873923 + AT_rich Low_complexity Low_complexity 1 21 0 246 308 0 11 chr2 207383267 207383358 -45873225 + (TA)n Simple_repeat Simple_repeat 2 91 0 207 0 0 0 chr2 207384360 207384383 -45872200 + (T)n Simple_repeat Simple_repeat 1 23 0 191 75 75 0 chr2 207385319 207385359 -45871224 + T-rich Low_complexity Low_complexity 2 44 0 303 28 0 0 chr2 207386248 207386284 -45870299 + (TC)n Simple_repeat Simple_repeat 2 37 0 408 341 54 8 chr2 207386776 207386905 -45869678 + L2 LINE L2 3137 3271 -1 203 261 0 0 chr2 207386906 207386952 -45869631 + GA-rich Low_complexity Low_complexity 3 48 0 2240 74 18 3 chr2 207387910 207388195 -45868388 - AluSg SINE Alu -16 294 6 217 303 61 0 chr2 207388195 207388261 -45868322 + MIR3 SINE MIR 108 177 -31 524 302 99 60 chr2 207388529 207388983 -45867600 + MLT1J LTR MaLR 13 484 -27 243 0 0 0 chr2 207389204 207389231 -45867352 + (A)n Simple_repeat Simple_repeat 1 27 0 12706 102 21 0 chr2 207389231 207391867 -45864716 + L1PA8 LINE L1 3511 6172 0 351 157 29 0 chr2 207391885 207391955 -45864628 + FLAM_A SINE Alu 62 133 0 181 272 12 74 chr2 207392450 207392531 -45864052 - L2 LINE L2 -5 3267 3192 2752 196 11 2 chr2 207394899 207395439 -45861144 - L1PA15 LINE L1 -1721 4425 3881 5063 135 42 12 chr2 207395446 207397133 -45859450 + L1PA15 LINE L1 4441 6163 -2 261 326 163 8 chr2 207397956 207398085 -45858498 + MIR SINE MIR 20 168 -94 6460 60 7 1 chr2 207398745 207400202 -45856381 - L1PA7 LINE L1 -13 6141 4659 2268 87 0 7 chr2 207400617 207400917 -45855666 - AluY SINE Alu -13 298 1 2031 166 55 29 chr2 207401104 207401640 -45854943 + MLT2A2 LTR ERVL 1 554 0 1702 176 34 14 chr2 207401776 207402072 -45854511 - AluJo SINE Alu -10 302 1 1131 269 66 81 chr2 207402099 207402708 -45853875 + MER45C DNA AcHobo 1 600 -353 322 280 119 14 chr2 207403231 207403374 -45853209 + MIR SINE MIR 105 262 0 2169 107 3 7 chr2 207403769 207404069 -45852514 + AluSx SINE Alu 1 299 -13 405 58 0 0 chr2 207405725 207405777 -45850806 + (CA)n Simple_repeat Simple_repeat 1 52 0 1331 203 34 7 chr2 207408282 207408578 -45848005 + L1MD1 LINE L1 5939 6242 0 25 65 0 0 chr2 207408734 207408780 -45847803 + AT_rich Low_complexity Low_complexity 1 46 0 815 288 67 4 chr2 207408831 207409071 -45847512 + MIR SINE MIR 5 259 -3 329 252 126 0 chr2 207409094 207409213 -45847370 - MIR SINE MIR -55 207 74 286 307 13 0 chr2 207409942 207410017 -45846566 + MIR SINE MIR 1 76 -186 346 98 20 0 chr2 207410040 207410091 -45846492 + MER75 DNA T2_type 463 514 0 482 279 27 20 chr2 207410105 207410252 -45846331 + MIR SINE MIR 111 258 -4 283 120 0 40 chr2 207410438 207410488 -45846095 - MLT1L LTR MaLR 0 615 568 246 111 0 44 chr2 207410560 207410605 -45845978 - MLT1L LTR MaLR -5 610 568 277 264 42 0 chr2 207411004 207411076 -45845507 - MLT1L LTR MaLR -538 77 3 302 205 313 18 chr2 207411440 207411552 -45845031 + L1ME4a LINE L1 2677 2821 -3325 21 0 0 0 chr2 207411570 207411591 -45844992 + AT_rich Low_complexity Low_complexity 1 21 0 225 132 0 0 chr2 207411619 207411657 -45844926 + (TA)n Simple_repeat Simple_repeat 2 39 0 609 310 78 83 chr2 207411695 207411948 -45844635 + L1ME4a LINE L1 2882 3135 -3011 2158 113 7 0 chr2 207411948 207412250 -45844333 + AluSg SINE Alu 1 304 -6 609 310 78 83 chr2 207412250 207413552 -45843031 + L1ME4a LINE L1 3135 4604 -1542 367 304 89 0 chr2 207413743 207413878 -45842705 + L2 LINE L2 3158 3304 -9 388 335 55 37 chr2 207413894 207414219 -45842364 + L1ME4a LINE L1 4728 5058 -1088 267 309 0 0 chr2 207414600 207414684 -45841899 + L1ME4a LINE L1 5742 5825 -296 311 285 83 52 chr2 207414746 207414939 -45841644 + L1ME4a LINE L1 5912 6110 -11 186 188 0 0 chr2 207415053 207415085 -45841498 + L2 LINE L2 3269 3300 -13 23 0 0 0 chr2 207415934 207415957 -45840626 + AT_rich Low_complexity Low_complexity 1 23 0 674 172 74 0 chr2 207415958 207416080 -45840503 - FLAM_C SINE Alu -10 133 3 531 260 137 10 chr2 207416244 207416448 -45840135 - MIR SINE MIR 0 262 33 228 224 45 15 chr2 207416487 207416554 -45840029 + L2 LINE L2 2549 2617 -697 335 178 59 69 chr2 207416757 207416858 -45839725 - MIR SINE MIR -6 256 157 23 0 0 0 chr2 207417573 207417596 -45838987 + AT_rich Low_complexity Low_complexity 1 23 0 1860 132 28 19 chr2 207417926 207418290 -45838293 + L1MA8 LINE L1 5925 6291 0 605 262 59 50 chr2 207420085 207420306 -45836277 - Charlie8 DNA MER1_type -2143 274 52 7458 151 55 2 chr2 207420619 207422060 -45834523 + L1MA5 LINE L1 3324 4840 -1306 2634 166 37 2 chr2 207422061 207422519 -45834064 + Tigger1 DNA MER2_type 2 475 -1943 7454 169 20 39 chr2 207422523 207425079 -45831504 - L1PA15 LINE L1 0 6165 3673 241 65 0 65 chr2 207425093 207425139 -45831444 - L1PA15 LINE L1 -2451 3695 3653 1419 198 54 97 chr2 207425139 207425583 -45831000 + MLT2B3 LTR ERVL 1 425 -129 2655 163 29 17 chr2 207425585 207426064 -45830519 + MST-int LTR MaLR 1167 1651 0 1535 189 16 6 chr2 207426051 207426066 -45830517 - L1PA15 LINE L1 -2474 3672 3659 * 2063 174 71 0 chr2 207426066 207426462 -45830121 + MSTA LTR MaLR 5 428 0 1535 189 16 6 chr2 207426462 207426764 -45829819 - L1PA15 LINE L1 -2487 3659 3352 12665 116 20 15 chr2 207426764 207428498 -45828085 + Tigger1 DNA MER2_type 463 2187 -231 279 0 0 0 chr2 207428498 207428529 -45828054 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1620 155 45 11 chr2 207428532 207428797 -45827786 - AluSx SINE Alu -28 284 11 12665 116 20 15 chr2 207428797 207429001 -45827582 + Tigger1 DNA MER2_type 2188 2414 -4 5586 139 31 24 chr2 207429006 207430003 -45826580 + L1MA5 LINE L1 4840 5857 -443 1903 144 6 54 chr2 207430003 207430356 -45826227 - MER1B DNA MER1_type -1 336 1 5586 139 31 24 chr2 207430356 207430798 -45825785 + L1MA5 LINE L1 5857 6294 -6 344 308 147 8 chr2 207430856 207431060 -45825523 + MIR SINE MIR 20 257 -5 204 270 112 11 chr2 207431116 207431205 -45825378 + MIR SINE MIR 165 262 0 24 32 0 0 chr2 207434288 207434319 -45822264 + AT_rich Low_complexity Low_complexity 1 31 0 1508 167 0 0 chr2 207434362 207434619 -45821964 - AluSx SINE Alu 0 309 53 186 43 0 0 chr2 207435021 207435044 -45821539 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 6663 25 0 0 chr2 207435045 207435813 -45820770 - L1PA3 LINE L1 -4 6151 5384 5511 20 0 0 chr2 207435809 207436471 -45820112 + L1PA3 LINE L1 4732 5393 -753 * 203 262 36 48 chr2 207438081 207438165 -45818418 + MER5A DNA MER1_type 107 189 0 502 325 57 42 chr2 207438230 207438495 -45818088 - MLT1J2 LTR MaLR -118 332 64 303 206 79 0 chr2 207438596 207438659 -45817924 + L1M4 LINE L1 5063 5130 -1016 2302 186 27 54 chr2 207438691 207439211 -45817372 + MLT2B2 LTR ERVL 1 506 -9 258 91 0 0 chr2 207439217 207439250 -45817333 + MLT2D LTR ERVL 380 412 -2 577 145 77 0 chr2 207440232 207440349 -45816234 - L1M4 LINE L1 -1088 5058 4933 516 299 25 10 chr2 207440396 207440597 -45815986 - LTR16A1 LTR ERVL 0 457 254 236 254 51 68 chr2 207440634 207440752 -45815831 - LTR16C LTR ERVL -303 188 73 240 381 22 36 chr2 207440833 207440972 -45815611 - MIR3 SINE MIR -49 159 23 1101 159 66 78 chr2 207441178 207441511 -45815072 + L1MB8 LINE L1 4898 5226 -920 227 197 30 15 chr2 207441524 207441590 -45814993 + (TA)n Simple_repeat Simple_repeat 2 68 0 1535 167 25 25 chr2 207441681 207441998 -45814585 + THE1C LTR MaLR 59 375 0 355 185 0 0 chr2 207441999 207442064 -45814519 + L1MB8 LINE L1 5334 5398 -786 * 1916 38 0 0 chr2 207442060 207442295 -45814288 - L1PA2 LINE L1 -4302 1844 1610 29271 26 1 0 chr2 207442295 207446600 -45809983 + L1PA2 LINE L1 1865 6155 0 3085 179 116 19 chr2 207446599 207447325 -45809258 + L1MB8 LINE L1 5383 6178 0 * 490 299 62 6 chr2 207449249 207449426 -45807157 + MIR SINE MIR 39 225 -37 180 351 75 35 chr2 207449876 207450050 -45806533 - L2 LINE L2 -225 3047 2867 38 51 0 0 chr2 207450731 207450790 -45805793 + AT_rich Low_complexity Low_complexity 1 59 0 283 224 103 28 chr2 207452871 207452978 -45803605 + MER103 DNA DNA 3 117 -49 548 175 33 71 chr2 207453803 207453986 -45802597 - MER53 DNA DNA -6 183 8 205 88 29 0 chr2 207454026 207454060 -45802523 + (TTTTTA)n Simple_repeat Simple_repeat 2 36 0 599 278 25 40 chr2 207454499 207454697 -45801886 - MLT1J1 LTR MaLR -251 195 1 189 0 0 0 chr2 207454864 207454885 -45801698 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 27 0 0 0 chr2 207456386 207456413 -45800170 + AT_rich Low_complexity Low_complexity 1 27 0 355 270 79 0 chr2 207456798 207456887 -45799696 + MER5A DNA MER1_type 10 105 -84 247 257 43 0 chr2 207456961 207457031 -45799552 - MIR SINE MIR -86 176 104 21 36 0 0 chr2 207458025 207458053 -45798530 + AT_rich Low_complexity Low_complexity 1 28 0 273 57 0 0 chr2 207458187 207458222 -45798361 + (TG)n Simple_repeat Simple_repeat 2 36 0 516 339 71 32 chr2 207459580 207460073 -45796510 + L1MEd LINE L1 850 1361 -5011 296 339 101 4 chr2 207460086 207460313 -45796270 + L1MEd LINE L1 1251 1499 -4885 1156 267 68 60 chr2 207460967 207461612 -45794971 + L1ME1 LINE L1 773 1422 -4987 23 33 0 0 chr2 207461667 207461697 -45794886 + AT_rich Low_complexity Low_complexity 1 30 0 366 187 0 0 chr2 207461788 207461863 -45794720 + L1ME1 LINE L1 3123 3197 -3209 326 95 0 0 chr2 207461865 207461907 -45794676 + 5S rRNA rRNA 1 42 -79 1246 228 120 4 chr2 207461907 207462358 -45794225 + L1ME1 LINE L1 3183 3685 -2721 1307 235 37 0 chr2 207462568 207462892 -45793691 + L1MA4 LINE L1 5963 6298 -2 30 0 0 0 chr2 207462892 207462922 -45793661 + AT_rich Low_complexity Low_complexity 1 30 0 2117 254 64 18 chr2 207463010 207463470 -45793113 + L1ME1 LINE L1 5111 5548 -878 2441 63 3 0 chr2 207463470 207463770 -45792813 + AluSp SINE Alu 1 301 -12 2117 254 64 18 chr2 207463770 207464375 -45792208 + L1ME1 LINE L1 5548 6230 -196 258 300 91 51 chr2 207464344 207464660 -45791923 + L1ME3A LINE L1 5729 6063 -367 * 659 263 45 41 chr2 207464672 207464915 -45791668 + L1ME3A LINE L1 6159 6402 -28 422 167 0 0 chr2 207465269 207465341 -45791242 - MER92C LTR ERV1 -2 552 481 2556 42 0 3 chr2 207465536 207465842 -45790741 + AluY SINE Alu 1 305 -6 367 204 0 107 chr2 207465846 207465949 -45790634 - MER92B LTR ERV1 -544 92 1 2482 48 0 10 chr2 207466308 207466622 -45789961 - AluY SINE Alu 0 311 1 192 77 0 0 chr2 207467213 207467239 -45789344 + (TAA)n Simple_repeat Simple_repeat 2 27 0 26 0 0 0 chr2 207467737 207467763 -45788820 + AT_rich Low_complexity Low_complexity 1 26 0 662 249 131 20 chr2 207467926 207468284 -45788299 + L1ME3A LINE L1 4637 5034 -1112 696 307 89 17 chr2 207468560 207469087 -45787496 + L1ME3A LINE L1 5307 5871 -299 235 233 0 58 chr2 207469477 207469580 -45787003 + L1MC4 LINE L1 6612 6708 -1334 208 216 0 0 chr2 207469595 207469632 -45786951 + (CA)n Simple_repeat Simple_repeat 2 38 0 556 224 89 34 chr2 207470146 207470325 -45786258 - MER5A DNA MER1_type 0 189 1 307 295 11 21 chr2 207471084 207471179 -45785404 + MIR SINE MIR 80 173 -89 863 166 26 0 chr2 207471188 207471339 -45785244 + MER5A DNA MER1_type 35 189 0 454 349 75 14 chr2 207471886 207472098 -45784485 + MIR SINE MIR 22 246 -16 21 0 0 0 chr2 207472914 207472935 -45783648 + AT_rich Low_complexity Low_complexity 1 21 0 242 321 0 49 chr2 207473637 207473718 -45782865 - L2 LINE L2 0 3272 3196 24 0 0 0 chr2 207474865 207474889 -45781694 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr2 207475969 207475991 -45780592 + AT_rich Low_complexity Low_complexity 1 22 0 333 269 30 104 chr2 207476194 207476462 -45780121 - MER112 DNA MER1_type -12 248 1 6653 78 16 1 chr2 207476602 207477867 -45778716 + L1PA11 LINE L1 4871 6166 -8 21 36 0 0 chr2 207478282 207478310 -45778273 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr2 207478747 207478770 -45777813 + AT_rich Low_complexity Low_complexity 1 23 0 675 293 18 40 chr2 207479307 207479529 -45777054 + MIR SINE MIR 16 232 -30 1963 137 61 9 chr2 207479541 207479884 -45776699 - MER46B DNA MER2_type 0 236 1 256 213 140 66 chr2 207479925 207480061 -45776522 - L1ME4a LINE L1 -46 6075 5930 21 0 0 0 chr2 207480062 207480083 -45776500 + AT_rich Low_complexity Low_complexity 1 21 0 255 31 0 0 chr2 207480800 207480832 -45775751 + (TC)n Simple_repeat Simple_repeat 1 32 0 268 140 20 0 chr2 207480885 207480935 -45775648 + Alu SINE Alu 247 297 -5 750 11 0 0 chr2 207480957 207481044 -45775539 + (GAA)n Simple_repeat Simple_repeat 1 87 0 2260 128 5 35 chr2 207481115 207481490 -45775093 - THE1B LTR MaLR 0 364 1 1927 78 24 20 chr2 207481786 207482081 -45774502 - L1MA1 LINE L1 -1 6301 6006 953 191 48 0 chr2 207482286 207482495 -45774088 + MER20B DNA MER1_type 1 219 0 387 331 6 28 chr2 207482870 207483048 -45773535 + MER5B DNA MER1_type 5 178 0 325 339 39 0 chr2 207484212 207484339 -45772244 + MIR SINE MIR 56 187 -75 1378 234 58 16 chr2 207484353 207484729 -45771854 + L1ME1 LINE L1 5770 6161 -5 198 0 0 0 chr2 207484992 207485014 -45771569 + (TTA)n Simple_repeat Simple_repeat 2 23 0 2306 86 0 3 chr2 207485016 207485319 -45771264 - AluY SINE Alu -9 302 1 2834 56 8 13 chr2 207485324 207485702 -45770881 - L1PA7 LINE L1 -8 6146 5771 416 308 87 59 chr2 207486113 207486571 -45770012 - L1 LINE L1 -1298 4848 4378 394 278 56 29 chr2 207486620 207486843 -45769740 - L1P LINE L1 -1869 4277 4050 266 318 0 0 chr2 207487813 207487898 -45768685 - L1M4 LINE L1 -2292 3854 3770 22 0 0 0 chr2 207487920 207487942 -45768641 + AT_rich Low_complexity Low_complexity 1 22 0 29 28 0 0 chr2 207488003 207488039 -45768544 + AT_rich Low_complexity Low_complexity 1 36 0 252 247 13 0 chr2 207488042 207488119 -45768464 - L1M4 LINE L1 -2439 3707 3630 454 336 77 62 chr2 207489535 207490323 -45766260 + L2 LINE L2 2090 2889 -425 255 339 48 32 chr2 207490603 207490727 -45765856 + L2 LINE L2 3139 3264 -8 433 292 81 14 chr2 207492008 207492217 -45764366 + ERVL LTR ERVL 4387 4609 -1155 630 305 56 0 chr2 207492506 207492703 -45763880 + ERVL LTR ERVL 4792 4999 -765 432 337 111 14 chr2 207492757 207493036 -45763547 + ERVL LTR ERVL 5118 5423 -341 1180 207 75 12 chr2 207493132 207493451 -45763132 - MER2 DNA MER2_type -1 343 5 347 302 11 50 chr2 207494040 207494219 -45762364 + LTR67 LTR ERVL 386 557 0 21 0 0 0 chr2 207494378 207494399 -45762184 + AT_rich Low_complexity Low_complexity 1 21 0 1853 116 0 0 chr2 207494491 207494764 -45761819 + AluSg SINE Alu 40 312 0 2212 200 49 0 chr2 207495964 207496409 -45760174 + MLT1C LTR MaLR 1 467 0 279 284 53 0 chr2 207496482 207496577 -45760006 + MER102a DNA MER1_type 198 297 -33 311 426 63 11 chr2 207497052 207497322 -45759261 + L3 LINE CR1 35 318 -1259 676 339 23 7 chr2 207497382 207497683 -45758900 + L2 LINE L2 2839 3144 -169 181 254 68 17 chr2 207497683 207497742 -45758841 - L2 LINE L2 -1 3312 3251 316 279 50 67 chr2 207497774 207497953 -45758630 + L2 LINE L2 3137 3312 -1 1289 269 119 20 chr2 207499345 207499377 -45757206 - LTR16A LTR ERVL 0 450 423 2788 189 14 4 chr2 207499377 207499891 -45756692 + MLT2B1 LTR ERVL 2 520 0 1289 269 119 20 chr2 207499891 207500252 -45756331 - LTR16A LTR ERVL -27 423 18 558 0 0 0 chr2 207500486 207500548 -45756035 + (GA)n Simple_repeat Simple_repeat 1 62 0 268 267 0 40 chr2 207502086 207502161 -45754422 - L2 LINE L2 0 3272 3201 435 329 37 0 chr2 207503060 207503224 -45753359 + MIR SINE MIR 86 255 -7 23 54 0 0 chr2 207503949 207503986 -45752597 + AT_rich Low_complexity Low_complexity 1 37 0 250 165 49 49 chr2 207505331 207505495 -45751088 + (TA)n Simple_repeat Simple_repeat 1 164 0 232 167 24 0 chr2 207507796 207507838 -45748745 + MIR3 SINE MIR 153 195 -13 185 288 85 17 chr2 207507873 207507932 -45748651 + L2 LINE L2 3209 3271 -1 197 288 0 61 chr2 207508420 207508486 -45748097 - MIR SINE MIR -6 256 195 247 382 11 0 chr2 207508538 207508627 -45747956 - L2 LINE L2 0 3313 3224 2300 50 0 3 chr2 207508788 207509098 -45747485 + AluY SINE Alu 2 310 0 581 240 176 5 chr2 207509528 207509732 -45746851 + L1ME1 LINE L1 5923 6161 -5 23 33 0 0 chr2 207509759 207509789 -45746794 + AT_rich Low_complexity Low_complexity 1 30 0 284 232 30 10 chr2 207509805 207509904 -45746679 + (TA)n Simple_repeat Simple_repeat 2 102 0 244 141 16 47 chr2 207509928 207509992 -45746591 + L1MCa LINE L1 2003 2064 -4362 23 68 0 0 chr2 207510367 207510411 -45746172 + AT_rich Low_complexity Low_complexity 1 44 0 388 213 53 6 chr2 207511506 207511672 -45744911 - L1MA9 LINE L1 -22 6290 6021 326 409 61 0 chr2 207511673 207511837 -45744746 + L2 LINE L2 3098 3271 -1 21 36 0 0 chr2 207516034 207516062 -45740521 + AT_rich Low_complexity Low_complexity 1 28 0 228 86 0 0 chr2 207518074 207518109 -45738474 + (TG)n Simple_repeat Simple_repeat 2 36 0 532 340 132 39 chr2 207520296 207520652 -45735931 - L2 LINE L2 -2 3270 2882 714 248 49 44 chr2 207521050 207521488 -45735095 - MLT1D LTR MaLR 0 505 18 294 281 25 12 chr2 207521949 207522109 -45734474 + (TA)n Simple_repeat Simple_repeat 2 163 0 230 152 0 0 chr2 207522109 207522155 -45734428 + LTR66 LTR ERVL 394 439 -171 261 0 0 0 chr2 207522155 207522184 -45734399 + (CA)n Simple_repeat Simple_repeat 2 30 0 395 344 47 10 chr2 207522382 207522574 -45734009 - MIR SINE MIR -44 218 20 297 0 0 0 chr2 207525475 207525508 -45731075 + (TG)n Simple_repeat Simple_repeat 1 33 0 261 0 0 0 chr2 207526152 207526181 -45730402 + (CA)n Simple_repeat Simple_repeat 1 29 0 225 0 0 0 chr2 207526180 207526205 -45730378 + (TC)n Simple_repeat Simple_repeat 1 25 0 * 283 262 16 0 chr2 207526441 207526502 -45730081 - L2 LINE L2 -6 3307 3246 1536 182 55 3 chr2 207526713 207527004 -45729579 + AluJb SINE Alu 1 306 -6 1703 96 116 0 chr2 207527057 207527308 -45729275 + AluSx SINE Alu 27 306 -6 296 247 93 31 chr2 207527677 207527774 -45728809 + MIR SINE MIR 36 138 -70 355 317 40 25 chr2 207527779 207527978 -45728605 + L3 LINE CR1 1225 1426 -151 180 111 0 0 chr2 207528046 207528073 -45728510 + (A)n Simple_repeat Simple_repeat 1 27 0 181 288 51 0 chr2 207528150 207528209 -45728374 + L2 LINE L2 1864 1925 -1389 479 264 54 20 chr2 207528522 207528670 -45727913 + MER105 DNA DNA 10 162 -42 2765 202 18 3 chr2 207529096 207529711 -45726872 - L1 LINE L1 -772 5374 4751 1006 97 13 0 chr2 207529707 207529861 -45726722 + L1PB4 LINE L1 5322 5477 -679 * 316 109 0 0 chr2 207529914 207529969 -45726614 + L1PB4 LINE L1 5470 5524 -632 7112 36 3 0 chr2 207529969 207531074 -45725509 - L1PA4 LINE L1 -4 6151 5070 5372 35 0 1 chr2 207531074 207531725 -45724858 + L1PA4 LINE L1 4420 5069 -1077 3110 128 38 2 chr2 207531722 207532224 -45724359 + L1PB4 LINE L1 5512 6031 -125 * 488 133 10 41 chr2 207532390 207532488 -45724095 + L1PB4 LINE L1 6049 6143 -13 231 344 21 0 chr2 207532931 207533027 -45723556 + L3 LINE CR1 1479 1576 -1 2142 99 31 0 chr2 207533432 207533726 -45722857 - AluSc SINE Alu -6 303 1 28 0 0 0 chr2 207534718 207534746 -45721837 + AT_rich Low_complexity Low_complexity 1 28 0 488 213 96 121 chr2 207535058 207535297 -45721286 + MIR SINE MIR 30 262 0 468 293 150 18 chr2 207535315 207535490 -45721093 - L1MC4a LINE L1 -1925 5883 5732 393 22 0 0 chr2 207535490 207535536 -45721047 + (TG)n Simple_repeat Simple_repeat 2 47 0 468 293 150 18 chr2 207535536 207535701 -45720882 - L1MC4a LINE L1 -2076 5732 5498 258 231 65 46 chr2 207536153 207536261 -45720322 - L1P LINE L1 -1137 5009 4900 425 295 66 16 chr2 207536363 207536607 -45719976 - L1MC4a LINE L1 -1326 4820 4565 733 294 47 5 chr2 207536842 207537056 -45719527 - MIR SINE MIR -21 241 19 2782 45 17 3 chr2 207537113 207537466 -45719117 - L1PA7 LINE L1 -3 6151 5794 904 45 0 0 chr2 207537466 207537578 -45719005 + L1PA7 LINE L1 5662 5773 -381 285 298 36 0 chr2 207538339 207538423 -45718160 + L1MB1 LINE L1 1596 1682 -5804 * 2383 252 55 36 chr2 207538418 207539459 -45717124 + L1MB1 LINE L1 2153 3220 -4345 255 200 29 0 chr2 207539496 207539566 -45717017 + L1MB1 LINE L1 3789 3860 -3705 2013 112 0 3 chr2 207539772 207540067 -45716516 + L1PB1 LINE L1 5857 6150 -1 315 213 106 43 chr2 207540067 207540153 -45716430 + L1MC4 LINE L1 6609 6703 -1339 8742 208 47 18 chr2 207540157 207543773 -45712810 + L1MB1 LINE L1 3866 7587 0 1015 259 0 0 chr2 207543857 207544069 -45712514 + MER58A DNA MER1_type 1 212 -12 353 240 16 80 chr2 207544461 207544586 -45711997 - MLT1H LTR MaLR -195 354 238 17930 116 10 42 chr2 207544779 207548623 -45707960 + L1PA7 LINE L1 8 3835 -2626 12956 86 23 1 chr2 207598624 207601216 -45655367 + L1PA7 LINE L1 3831 6460 -9 27 49 0 0 chr2 207601441 207601482 -45655101 + AT_rich Low_complexity Low_complexity 1 41 0 247 323 43 0 chr2 207602120 207602213 -45654370 + MIR SINE MIR 15 111 -151 206 346 19 0 chr2 207602297 207602349 -45654234 - L2 LINE L2 -19 3294 3242 1018 256 113 0 chr2 207602399 207602692 -45653891 - MER46C DNA MER2_type -6 332 7 422 269 134 13 chr2 207602699 207602848 -45653735 - MIR SINE MIR -66 196 30 181 301 60 24 chr2 207602904 207602987 -45653596 - L2 LINE L2 -107 3165 3080 261 0 0 0 chr2 207605036 207605065 -45651518 + (CA)n Simple_repeat Simple_repeat 2 30 0 27 29 0 0 chr2 207605249 207605283 -45651300 + AT_rich Low_complexity Low_complexity 1 34 0 28 29 0 0 chr2 207605855 207605890 -45650693 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr2 207606273 207606301 -45650282 + AT_rich Low_complexity Low_complexity 1 28 0 741 269 88 22 chr2 207607410 207607637 -45648946 + MIR SINE MIR 6 247 -15 217 283 0 0 chr2 207608229 207608282 -45648301 + GA-rich Low_complexity Low_complexity 2 54 0 284 266 46 28 chr2 207608284 207608393 -45648190 - MIR SINE MIR -36 226 116 222 37 0 0 chr2 207608941 207608968 -45647615 + (A)n Simple_repeat Simple_repeat 1 27 0 320 286 110 40 chr2 207609232 207609319 -45647264 + L1M4 LINE L1 2873 2953 -3193 359 139 25 13 chr2 207609319 207609398 -45647185 - MER116 DNA Mariner 0 80 1 320 286 110 40 chr2 207609398 207609583 -45647000 + L1M4 LINE L1 2953 3164 -2982 255 256 67 11 chr2 207609594 207609684 -45646899 + L1P LINE L1 3185 3279 -2867 305 283 33 66 chr2 207609855 207610007 -45646576 + MIR SINE MIR 116 262 0 25 0 0 0 chr2 207610103 207610128 -45646455 + AT_rich Low_complexity Low_complexity 1 25 0 304 335 24 68 chr2 207610198 207610449 -45646134 + L1M4 LINE L1 3521 3760 -2386 273 250 42 21 chr2 207610889 207610985 -45645598 - LTR33 LTR ERVL 0 521 424 1928 143 110 28 chr2 207611074 207611501 -45645082 + MLT1C LTR MaLR 6 467 0 217 219 0 0 chr2 207612000 207612041 -45644542 + (TGGA)n Simple_repeat Simple_repeat 4 44 0 23 33 0 0 chr2 207612313 207612343 -45644240 + AT_rich Low_complexity Low_complexity 1 30 0 202 298 36 12 chr2 207612618 207612702 -45643881 + L2 LINE L2 3179 3264 -8 403 331 103 63 chr2 207613747 207614194 -45642389 - L2 LINE L2 0 3272 2808 806 320 73 40 chr2 207614408 207615153 -45641430 + L2 LINE L2 2511 3309 -4 220 373 43 24 chr2 207615139 207615348 -45641235 - L2 LINE L2 -633 2681 2469 * 180 327 39 70 chr2 207615537 207615693 -45640890 - L2 LINE L2 -15 3298 3148 2205 118 0 10 chr2 207616103 207616409 -45640174 + AluSg SINE Alu 1 303 -7 419 293 26 0 chr2 207617605 207617721 -45638862 - MIR SINE MIR -42 220 102 385 197 43 7 chr2 207618200 207618405 -45638178 - MER20B DNA MER1_type -2 781 543 363 320 7 14 chr2 207619561 207619723 -45636860 + CT-rich Low_complexity Low_complexity 3 276 0 3500 125 9 9 chr2 207619723 207620259 -45636324 - L1PA16 LINE L1 -16 6150 5615 363 321 79 6 chr2 207620491 207620655 -45635928 + MIR3 SINE MIR 2 178 -30 23 0 0 0 chr2 207620933 207620956 -45635627 + AT_rich Low_complexity Low_complexity 1 23 0 598 268 34 38 chr2 207621782 207622021 -45634562 - L2 LINE L2 0 3313 3076 1671 175 13 22 chr2 207623049 207623364 -45633219 + AluJb SINE Alu 1 312 0 2203 100 0 0 chr2 207624315 207624641 -45631942 + AluSg SINE Alu 1 326 0 2279 95 0 0 chr2 207624652 207624946 -45631637 + AluSc SINE Alu 1 294 -15 684 106 44 0 chr2 207625010 207625123 -45631460 + L1PA16 LINE L1 6040 6157 -9 2094 102 10 20 chr2 207625142 207625446 -45631137 + AluSg SINE Alu 3 303 -7 734 234 184 65 chr2 207625879 207626404 -45630179 - MLT1H1 LTR MaLR 0 555 1 276 285 13 99 chr2 207626557 207626708 -45629875 + MLT1K LTR MaLR 293 430 -158 898 183 0 0 chr2 207627693 207627835 -45628748 + MER46A DNA MER2_type 1 142 -94 1694 215 44 23 chr2 207627941 207628374 -45628209 - MER74A LTR ERVL 0 558 117 677 54 11 0 chr2 207629038 207629130 -45627453 - L1PA7 LINE L1 -2 6152 6060 377 284 85 14 chr2 207629377 207629518 -45627065 - MIR SINE MIR -108 154 4 569 327 7 7 chr2 207629863 207630016 -45626567 + MIR3 SINE MIR 33 185 -23 2448 102 0 3 chr2 207630097 207630441 -45626142 - L1PB1 LINE L1 -4 6147 5805 197 274 0 82 chr2 207630514 207630587 -45625996 - MIR3 SINE MIR -43 165 99 301 333 17 8 chr2 207631640 207631760 -45624823 + L2 LINE L2 3183 3303 -10 447 315 171 0 chr2 207633079 207633295 -45623288 - MIR SINE MIR -5 257 5 2003 89 12 4 chr2 207633438 207633696 -45622887 + AluSq SINE Alu 34 293 -20 243 0 0 0 chr2 207633697 207633724 -45622859 + (TA)n Simple_repeat Simple_repeat 2 28 0 2106 133 0 0 chr2 207634571 207634887 -45621696 + AluJb SINE Alu 1 316 0 1723 176 0 23 chr2 207635238 207635539 -45621044 - AluJb SINE Alu -15 297 4 192 306 163 33 chr2 207636206 207636451 -45620132 - L2 LINE L2 -350 2964 2688 5752 70 41 0 chr2 207636874 207637657 -45618926 + L1PA7 LINE L1 5339 6153 -1 1070 180 65 5 chr2 207637668 207637868 -45618715 - AluJo SINE Alu -12 300 89 249 264 9 82 chr2 207638026 207638136 -45618447 - L1ME3A LINE L1 -104 6066 5965 1041 295 100 26 chr2 207638402 207638981 -45617602 - L1ME3A LINE L1 -286 5884 5263 718 222 11 53 chr2 207639541 207639730 -45616853 - MER63A DNA MER1_type -29 181 1 2154 301 140 30 chr2 207639730 207641022 -45615561 + L2 LINE L2 1861 3308 -5 2214 112 3 0 chr2 207641032 207641327 -45615256 + AluSp SINE Alu 1 296 -17 28 48 0 0 chr2 207642187 207642229 -45614354 + AT_rich Low_complexity Low_complexity 1 42 0 180 0 0 0 chr2 207642796 207642816 -45613767 + (A)n Simple_repeat Simple_repeat 1 20 0 657 144 9 9 chr2 207642920 207643031 -45613552 - FLAM_A SINE Alu -12 130 20 281 374 58 0 chr2 207643325 207643337 -45613246 - L2 LINE L2 -15 3257 3247 198 118 0 0 chr2 207643337 207643371 -45613212 + (TA)n Simple_repeat Simple_repeat 1 34 0 281 374 58 0 chr2 207643371 207643497 -45613086 - L2 LINE L2 -25 3247 3111 412 169 227 13 chr2 207643696 207643850 -45612733 - MER53 DNA DNA -1 188 2 402 21 0 0 chr2 207644061 207644108 -45612475 + (TG)n Simple_repeat Simple_repeat 2 48 0 916 195 0 0 chr2 207644109 207644263 -45612320 + FRAM SINE Alu 5 158 -18 575 312 79 11 chr2 207644568 207644847 -45611736 - LTR16C LTR ERVL 0 491 194 564 283 89 21 chr2 207645492 207645734 -45610849 - MIR SINE MIR -13 249 1 33 25 0 0 chr2 207645745 207645785 -45610798 + AT_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr2 207645950 207645971 -45610612 + AT_rich Low_complexity Low_complexity 1 21 0 859 244 53 32 chr2 207646701 207646947 -45609636 + MIR SINE MIR 3 253 -9 189 289 0 0 chr2 207647473 207647525 -45609058 + L2 LINE L2 1251 1302 -2012 204 40 0 0 chr2 207647695 207647720 -45608863 + (T)n Simple_repeat Simple_repeat 1 25 0 24 32 0 0 chr2 207648083 207648114 -45608469 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr2 207648399 207648427 -45608156 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr2 207648811 207648834 -45607749 + AT_rich Low_complexity Low_complexity 1 23 0 360 274 72 116 chr2 207649129 207649406 -45607177 - L1MC4 LINE L1 -1001 7002 6696 602 256 48 0 chr2 207649784 207649952 -45606631 - MER97a DNA MER1_type? -718 176 1 24 32 0 0 chr2 207650688 207650719 -45605864 + AT_rich Low_complexity Low_complexity 1 31 0 263 231 26 0 chr2 207650729 207650807 -45605776 + (TA)n Simple_repeat Simple_repeat 2 81 0 1961 90 9 87 chr2 207652120 207652452 -45604131 - AluSg SINE Alu -2 308 3 491 106 0 12 chr2 207652522 207652607 -45603976 + (TCCC)n Simple_repeat Simple_repeat 1 84 0 27 0 0 0 chr2 207653523 207653550 -45603033 + AT_rich Low_complexity Low_complexity 1 27 0 417 254 65 55 chr2 207653699 207653962 -45602621 - L1ME4a LINE L1 -220 5901 5634 267 309 0 24 chr2 207654784 207654868 -45601715 - MIR SINE MIR -109 153 72 25 31 0 0 chr2 207655906 207655938 -45600645 + AT_rich Low_complexity Low_complexity 1 32 0 243 88 0 0 chr2 207657869 207657903 -45598680 + (TG)n Simple_repeat Simple_repeat 2 35 0 577 229 188 92 chr2 207657975 207658268 -45598315 + MER102a DNA MER1_type 10 330 0 180 250 83 97 chr2 207659201 207659273 -45597310 - MIR3 SINE MIR -24 184 114 21 0 0 0 chr2 207660599 207660620 -45595963 + AT_rich Low_complexity Low_complexity 1 21 0 525 292 43 68 chr2 207660767 207661048 -45595535 + L2 LINE L2 3036 3309 -4 343 293 12 0 chr2 207662411 207662493 -45594090 + MIR3 SINE MIR 77 159 -49 22 0 0 0 chr2 207662615 207662637 -45593946 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr2 207662958 207662987 -45593596 + AT_rich Low_complexity Low_complexity 1 29 0 208 321 183 0 chr2 207664843 207664980 -45591603 + MIR3 SINE MIR 41 202 -6 356 327 68 57 chr2 207665103 207665366 -45591217 - L2 LINE L2 -14 3258 2993 642 210 154 6 chr2 207666046 207666208 -45590375 + MER5A DNA MER1_type 4 189 0 182 37 37 0 chr2 207667082 207667109 -45589474 + (TTTTTA)n Simple_repeat Simple_repeat 2 29 0 197 277 62 80 chr2 207667144 207667256 -45589327 + L2 LINE L2 1345 1454 -1860 370 286 45 55 chr2 207667614 207667813 -45588770 + L2 LINE L2 1857 2053 -1261 528 274 111 22 chr2 207668150 207668376 -45588207 - MIR SINE MIR -2 260 15 690 291 143 44 chr2 207668503 207668563 -45588020 + MER115 DNA AcHobo 90 143 -550 2377 73 0 16 chr2 207668563 207668879 -45587704 - AluY SINE Alu 0 311 1 690 291 143 44 chr2 207668879 207669224 -45587359 + MER115 DNA AcHobo 143 535 -158 186 43 0 0 chr2 207669362 207669385 -45587198 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 444 266 173 0 chr2 207669524 207669663 -45586920 - MER5A DNA MER1_type -18 171 9 330 313 6 72 chr2 207669671 207669837 -45586746 - MER5A DNA MER1_type -34 155 1 202 275 42 3 chr2 207669847 207669980 -45586603 - MER5A DNA MER1_type -3 186 9 712 204 108 12 chr2 207671253 207671420 -45585163 + MER5A DNA MER1_type 6 188 -1 231 383 78 17 chr2 207674913 207675028 -45581555 + L2 LINE L2 3134 3255 -17 234 341 121 30 chr2 207677455 207677760 -45578823 - L2 LINE L2 -337 2977 2645 593 314 31 18 chr2 207678149 207678378 -45578205 - MIR SINE MIR -10 252 21 375 78 0 0 chr2 207678564 207678615 -45577968 + (TG)n Simple_repeat Simple_repeat 2 52 0 209 266 51 51 chr2 207680148 207680227 -45576356 - MIR3 SINE MIR -5 203 125 215 203 17 0 chr2 207681944 207682003 -45574580 + (TA)n Simple_repeat Simple_repeat 1 60 0 268 203 0 51 chr2 207682053 207682132 -45574451 - L1MC4 LINE L1 -1354 6688 6614 278 283 88 9 chr2 207682696 207682809 -45573774 + MIR SINE MIR 67 188 -74 228 35 0 0 chr2 207683856 207683885 -45572698 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 193 25 0 100 chr2 207684039 207684079 -45572504 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 299 344 16 16 chr2 207684497 207684622 -45571961 + L2 LINE L2 3148 3272 0 238 296 74 37 chr2 207687952 207688060 -45568523 + L2 LINE L2 3158 3269 -3 313 262 98 37 chr2 207688580 207688744 -45567839 + MER5B DNA MER1_type 1 174 -4 2031 121 3 3 chr2 207689800 207690089 -45566494 + AluSc SINE Alu 1 289 -20 234 333 22 0 chr2 207690469 207690559 -45566024 + MIR SINE MIR 149 240 -22 449 340 52 17 chr2 207691482 207691714 -45564869 - MIR SINE MIR 0 262 23 1574 180 26 3 chr2 207692081 207692478 -45564105 + AluJo SINE Alu 1 404 0 23 54 0 0 chr2 207692571 207692608 -45563975 + AT_rich Low_complexity Low_complexity 1 37 0 13082 84 9 4 chr2 207694432 207696874 -45559709 - L1PA7 LINE L1 -3 6151 3539 243 278 0 0 chr2 207696875 207696929 -45559654 - L3 LINE CR1 -62 1515 1462 33 25 0 0 chr2 207696974 207697014 -45559569 + AT_rich Low_complexity Low_complexity 1 40 0 201 260 60 15 chr2 207697246 207697320 -45559263 - MIR SINE MIR -62 146 69 24 32 0 0 chr2 207697593 207697624 -45558959 + AT_rich Low_complexity Low_complexity 1 31 0 331 284 11 23 chr2 207697639 207697727 -45558856 + MLT2E LTR ERVL 44 130 -498 271 257 53 26 chr2 207697947 207698060 -45558523 + MLT2E LTR ERVL 506 621 -7 392 318 66 33 chr2 207698308 207698550 -45558033 + MLT1J LTR MaLR 240 489 -22 1060 213 9 28 chr2 207699380 207699591 -45556992 + MER20 DNA MER1_type 3 209 -10 393 200 25 0 chr2 207699606 207699686 -45556897 + MLT1K LTR MaLR 505 586 -2 243 261 0 0 chr2 207699950 207699996 -45556587 + MER91A DNA MER1_type 3 48 -148 294 261 62 0 chr2 207700022 207700087 -45556496 + MER91A DNA MER1_type 127 195 -1 451 296 101 43 chr2 207700985 207701374 -45555209 - MLT1J2 LTR MaLR 0 409 1 184 219 14 14 chr2 207701976 207702049 -45554534 + (TA)n Simple_repeat Simple_repeat 2 74 0 677 286 129 20 chr2 207702336 207702692 -45553891 + MLT1I LTR MaLR 6 400 -9 2278 169 36 11 chr2 207702955 207703405 -45553178 + L1MC1 LINE L1 5867 6327 -6 249 83 0 0 chr2 207703531 207703567 -45553016 + (TG)n Simple_repeat Simple_repeat 2 37 0 337 330 111 18 chr2 207704442 207704945 -45551638 + HAL1 LINE L1 1109 1658 -849 23 0 0 0 chr2 207705098 207705121 -45551462 + AT_rich Low_complexity Low_complexity 1 23 0 27 0 0 0 chr2 207705359 207705386 -45551197 + AT_rich Low_complexity Low_complexity 1 27 0 2019 162 15 0 chr2 207705872 207706212 -45550371 + MER7A DNA MER2_type 1 343 -3 27 73 0 0 chr2 207707077 207707132 -45549451 + AT_rich Low_complexity Low_complexity 1 55 0 35 92 0 0 chr2 207707172 207707270 -45549313 + AT_rich Low_complexity Low_complexity 1 98 0 22 0 0 0 chr2 207707319 207707341 -45549242 + AT_rich Low_complexity Low_complexity 1 22 0 1582 131 0 4 chr2 207707405 207707672 -45548911 - L1MA2 LINE L1 0 6304 6039 313 287 172 25 chr2 207707678 207707835 -45548748 + L1 LINE L1 3712 3891 -2255 777 186 32 113 chr2 207707864 207708112 -45548471 + L1MB8 LINE L1 3713 3940 -2206 * 5847 71 13 8 chr2 207708099 207708874 -45547709 + L1PA10 LINE L1 5390 6168 0 3145 238 59 36 chr2 207708928 207709949 -45546634 + L1MB8 LINE L1 4050 5093 -1053 * 3744 199 39 20 chr2 207709947 207710800 -45545783 - L1MB4 LINE L1 0 6180 5312 1085 152 10 10 chr2 207710808 207711012 -45545571 + L1MB4 LINE L1 5084 5287 -859 1274 96 0 16 chr2 207711014 207711201 -45545382 + L1PA7 LINE L1 5968 6151 -3 408 174 0 35 chr2 207711207 207711293 -45545290 + AluS SINE Alu 220 302 0 1801 217 18 5 chr2 207711293 207711694 -45544889 + L1MB8 LINE L1 5270 5675 -499 1015 265 51 40 chr2 207711699 207712050 -45544533 + LTR55 LTR ERV 73 427 -121 1688 81 142 4 chr2 207712128 207712388 -45544195 + AluY SINE Alu 1 296 -5 2274 178 23 17 chr2 207712389 207712872 -45543711 + L1MB8 LINE L1 5683 6168 -10 263 224 0 0 chr2 207712962 207713029 -45543554 + L1MA10 LINE L1 6257 6323 -11 33 25 0 0 chr2 207713045 207713085 -45543498 + AT_rich Low_complexity Low_complexity 1 40 0 1062 164 55 14 chr2 207713111 207713331 -45543252 - L1MB4 LINE L1 0 6180 5952 50 42 0 0 chr2 207713331 207713402 -45543181 + AT_rich Low_complexity Low_complexity 1 71 0 413 101 68 20 chr2 207713402 207713550 -45543033 + (TTATA)n Simple_repeat Simple_repeat 5 159 0 220 265 0 0 chr2 207714254 207714303 -45542280 - L2 LINE L2 0 3313 3265 298 242 142 8 chr2 207714352 207714472 -45542111 - L1ME4a LINE L1 -2 6119 5984 287 293 41 8 chr2 207714633 207714756 -45541827 - MIR SINE MIR -10 252 126 256 377 0 0 chr2 207714879 207715001 -45541582 - L1ME4a LINE L1 -2005 5803 5682 1310 169 58 23 chr2 207715201 207715462 -45541121 - AluJb SINE Alu -8 304 35 31 26 0 0 chr2 207715604 207715642 -45540941 + AT_rich Low_complexity Low_complexity 1 38 0 255 270 144 9 chr2 207716014 207716125 -45540458 - L2 LINE L2 0 3313 3188 402 318 71 8 chr2 207717344 207717470 -45539113 - MIR SINE MIR -109 153 20 237 65 0 0 chr2 207717937 207717968 -45538615 + (TG)n Simple_repeat Simple_repeat 2 32 0 540 224 70 26 chr2 207719026 207719182 -45537401 - HsTC2 DNA Tc2 -462 1436 1274 469 326 0 7 chr2 207719184 207719328 -45537255 - HsTC2 DNA Tc2 -1750 148 6 247 231 154 70 chr2 207719334 207719477 -45537106 + L2 LINE L2 3159 3313 0 24 0 0 0 chr2 207720924 207720948 -45535635 + AT_rich Low_complexity Low_complexity 1 24 0 426 329 17 29 chr2 207721988 207722195 -45534388 - MIR SINE MIR -40 222 20 206 292 69 42 chr2 207722313 207722385 -45534198 + MIR3 SINE MIR 90 163 -45 2001 141 20 0 chr2 207722386 207722692 -45533891 - AluJb SINE Alu 0 312 1 567 306 71 5 chr2 207722762 207722958 -45533625 + MIR SINE MIR 51 259 -3 24 32 0 0 chr2 207723445 207723476 -45533107 + AT_rich Low_complexity Low_complexity 1 31 0 33 25 0 0 chr2 207723732 207723772 -45532811 + AT_rich Low_complexity Low_complexity 1 40 0 22 56 0 0 chr2 207724137 207724173 -45532410 + AT_rich Low_complexity Low_complexity 1 36 0 237 65 0 0 chr2 207724772 207724803 -45531780 + (TAA)n Simple_repeat Simple_repeat 2 32 0 21 0 0 0 chr2 207724969 207724990 -45531593 + AT_rich Low_complexity Low_complexity 1 21 0 267 149 21 0 chr2 207725828 207725875 -45530708 - L2 LINE L2 0 3313 3266 246 294 49 10 chr2 207726854 207726956 -45529627 - Charlie7 DNA MER1_type -2505 107 2 22 56 0 0 chr2 207727575 207727611 -45528972 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr2 207728495 207728518 -45528065 + AT_rich Low_complexity Low_complexity 1 23 0 204 235 272 12 chr2 207728584 207728665 -45527918 - MIR SINE MIR 0 262 161 675 222 13 78 chr2 207729567 207729797 -45526786 + HAL1 LINE L1 2096 2310 -197 22 70 0 0 chr2 207730248 207730291 -45526292 + AT_rich Low_complexity Low_complexity 1 43 0 522 222 99 81 chr2 207730580 207730801 -45525782 + MLT1L LTR MaLR 54 278 -337 475 234 53 64 chr2 207730880 207731051 -45525532 - HAL1 LINE L1 -195 2312 2144 517 281 88 35 chr2 207731079 207731250 -45525333 + MER63A DNA MER1_type 1 180 -30 1905 241 98 16 chr2 207731250 207731832 -45524751 - HAL1 LINE L1 -444 2063 1434 2480 78 0 0 chr2 207732173 207732481 -45524102 + AluY SINE Alu 1 308 -3 262 288 112 0 chr2 207732773 207732898 -45523685 - L1MC4a LINE L1 -1886 5922 5784 1158 243 70 17 chr2 207732899 207733200 -45523383 + MER58B DNA MER1_type 1 317 -24 4940 84 141 3 chr2 207733284 207734010 -45522573 - LTR12 LTR ERV1 0 826 1 312 362 89 28 chr2 207734065 207734347 -45522236 - L2 LINE L2 -416 2898 2600 22 0 0 0 chr2 207734480 207734502 -45522081 + AT_rich Low_complexity Low_complexity 1 22 0 195 204 0 0 chr2 207735199 207735248 -45521335 + (CATA)n Simple_repeat Simple_repeat 3 51 0 189 313 72 35 chr2 207735408 207735580 -45521003 + MIR SINE MIR 81 262 0 198 0 0 0 chr2 207736264 207736286 -45520297 + (TA)n Simple_repeat Simple_repeat 2 23 0 29 28 0 0 chr2 207738297 207738333 -45518250 + AT_rich Low_complexity Low_complexity 1 36 0 273 75 0 0 chr2 207738643 207738683 -45517900 + (T)n Simple_repeat Simple_repeat 1 40 0 2666 147 2 2 chr2 207738843 207739286 -45517297 + L1P LINE L1 4470 4912 -1234 262 46 21 35 chr2 207739386 207739441 -45517142 + L1PA10 LINE L1 6119 6170 -4 295 53 0 0 chr2 207739644 207739682 -45516901 - tRNA-Gly-GGA tRNA tRNA -37 38 1 239 351 64 0 chr2 207739710 207739804 -45516779 + L2 LINE L2 3190 3289 -24 242 355 157 25 chr2 207739975 207740459 -45516124 + L2 LINE L2 1864 2411 -903 310 327 31 43 chr2 207740872 207741034 -45515549 - MLT1J2 LTR MaLR -286 161 1 294 29 0 0 chr2 207741050 207741085 -45515498 + (CA)n Simple_repeat Simple_repeat 2 36 0 3502 253 89 44 chr2 207741702 207742462 -45514121 + L1ME2 LINE L1 3362 4086 -2078 1730 172 0 10 chr2 207742462 207742752 -45513831 + AluJo SINE Alu 11 297 -15 3502 253 89 44 chr2 207742752 207744522 -45512061 + L1ME2 LINE L1 4086 5990 -174 2896 206 20 74 chr2 207745220 207746467 -45510116 + L1MB3 LINE L1 5117 6295 -2 197 307 193 0 chr2 207746927 207747015 -45509568 + MIR SINE MIR 18 122 -86 518 29 15 0 chr2 207748694 207748762 -45507821 + (TAGA)n Simple_repeat Simple_repeat 4 72 0 236 200 17 0 chr2 207750980 207751040 -45505543 + (TA)n Simple_repeat Simple_repeat 1 61 0 2116 110 21 0 chr2 207751670 207751961 -45504622 - AluSx SINE Alu -15 297 1 481 368 46 0 chr2 207752269 207752595 -45503988 - HsTC2 DNA Tc2 -1035 863 523 243 276 79 0 chr2 207752845 207752921 -45503662 - HsTC2 DNA Tc2 -1816 82 1 1001 336 147 19 chr2 207753242 207754209 -45502374 + L2 LINE L2 1690 2780 -534 292 304 70 44 chr2 207754656 207754814 -45501769 - MER5B DNA MER1_type 0 178 17 207 190 52 0 chr2 207755046 207755104 -45501479 + A-rich Low_complexity Low_complexity 5 65 0 204 40 0 0 chr2 207755902 207755927 -45500656 + (TG)n Simple_repeat Simple_repeat 2 26 0 337 224 126 70 chr2 207755959 207756102 -45500481 - MER112 DNA MER1_type -30 230 80 313 405 19 34 chr2 207756796 207757001 -45499582 - L2 LINE L2 -61 3211 3010 3825 126 15 1 chr2 207757008 207757907 -45498676 + L1PB1 LINE L1 4873 5780 -371 479 39 110 13 chr2 207757925 207758080 -45498503 + (TA)n Simple_repeat Simple_repeat 1 170 0 235 146 31 31 chr2 207758146 207758276 -45498307 + (TA)n Simple_repeat Simple_repeat 2 131 0 353 186 62 3 chr2 207758307 207758620 -45497963 + (TA)n Simple_repeat Simple_repeat 1 331 0 372 179 66 3 chr2 207758683 207758991 -45497592 + (TA)n Simple_repeat Simple_repeat 1 327 0 2210 148 3 11 chr2 207759000 207759373 -45497210 + L1PB1 LINE L1 5782 6151 0 185 336 48 10 chr2 207759438 207759542 -45497041 + MIR SINE MIR 67 174 -88 242 260 0 0 chr2 207759596 207759646 -45496937 + (TGG)n Simple_repeat Simple_repeat 3 52 0 393 329 7 22 chr2 207760941 207761078 -45495505 + MIR SINE MIR 7 141 -121 2874 206 79 67 chr2 207761255 207762126 -45494457 + Charlie1a DNA MER1_type 1 882 -573 5450 114 54 8 chr2 207762127 207763596 -45492987 + L1PA13 LINE L1 4623 6163 0 856 194 0 7 chr2 207764085 207764240 -45492343 + MLT1A1 LTR MaLR 1 154 -211 3117 165 35 8 chr2 207764246 207765083 -45491500 + L1PA16 LINE L1 4727 5540 -626 1675 81 17 0 chr2 207765083 207765327 -45491256 + L1PA8 LINE L1 5925 6172 0 3472 144 26 3 chr2 207765327 207765897 -45490686 + L1PA16 LINE L1 5570 6157 -9 3117 165 35 8 chr2 207765897 207765921 -45490662 + L1PA16 LINE L1 5539 5610 -556 2224 188 60 13 chr2 207765967 207766516 -45490067 + Charlie1a DNA MER1_type 876 1450 -5 6723 153 25 21 chr2 207767051 207768294 -45488289 + L1MA2 LINE L1 3770 5017 -1129 6963 99 6 10 chr2 207768710 207769742 -45486841 + L1MA2 LINE L1 5277 6304 0 224 274 0 0 chr2 207769932 207769983 -45486600 + GA-rich Low_complexity Low_complexity 2 52 0 194 317 57 89 chr2 207770739 207770862 -45485721 + L2 LINE L2 2883 3001 -271 270 312 0 71 chr2 207771595 207771736 -45484847 - MIR SINE MIR -60 202 72 2602 7 3 3 chr2 207771854 207772147 -45484436 - AluYa5 SINE Alu -18 293 1 8792 118 9 2 chr2 207772503 207773780 -45482803 + HSMAR1 DNA Mariner 2 1287 0 863 292 58 35 chr2 207773798 207774192 -45482391 + MLT1L LTR MaLR 205 607 -8 225 0 0 0 chr2 207776866 207776891 -45479692 + (CAAAAA)n Simple_repeat Simple_repeat 4 28 0 228 67 0 0 chr2 207777599 207777629 -45478954 + (A)n Simple_repeat Simple_repeat 1 30 0 22 0 0 0 chr2 207777948 207777970 -45478613 + AT_rich Low_complexity Low_complexity 1 22 0 1021 286 49 40 chr2 207778386 207778980 -45477603 + L1MC4a LINE L1 5297 5895 -1913 309 93 74 0 chr2 207778980 207779034 -45477549 + L1MA9 LINE L1 6217 6274 -38 495 99 0 0 chr2 207779071 207779142 -45477441 + MSTA LTR MaLR 1 71 -357 2220 101 0 3 chr2 207779831 207780129 -45476454 - AluSc SINE Alu -12 297 1 1963 111 4 4 chr2 207780608 207780888 -45475695 - AluSx SINE Alu -2 310 31 937 120 0 0 chr2 207780888 207781021 -45475562 - LTR12 LTR ERV1 0 714 582 4327 113 50 72 chr2 207781022 207781866 -45474717 - LTR12 LTR ERV1 -1 825 1 2145 123 0 3 chr2 207782212 207782520 -45474063 + AluSx SINE Alu 1 307 -5 1202 203 144 48 chr2 207784397 207784597 -45471986 - LTR50 LTR ERVL -6 789 610 3828 180 49 1 chr2 207784597 207785297 -45471286 - MER44D DNA MER2_type 0 605 1 1202 203 144 48 chr2 207785297 207785735 -45470848 - LTR50 LTR ERVL -185 610 3 2010 69 69 0 chr2 207785966 207786290 -45470293 - AluY SINE Alu 0 311 1 440 325 8 0 chr2 207786312 207786432 -45470151 - L2 LINE L2 -9 3304 3184 237 83 0 0 chr2 207786850 207786886 -45469697 + (TA)n Simple_repeat Simple_repeat 2 37 0 239 176 0 0 chr2 207789705 207789756 -45466827 + L1MC4 LINE L1 6653 6703 -1339 233 222 0 0 chr2 207789756 207789801 -45466782 + (CATATA)n Simple_repeat Simple_repeat 6 50 0 320 313 75 0 chr2 207789816 207789950 -45466633 + MIR SINE MIR 116 259 -3 362 339 123 0 chr2 207790028 207790223 -45466360 + MIR SINE MIR 21 239 -23 605 242 56 48 chr2 207790693 207790924 -45465659 + MLT1E LTR MaLR 15 247 -346 662 182 28 28 chr2 207790929 207791072 -45465511 + MLT1E LTR MaLR 451 593 0 207 151 38 0 chr2 207791968 207792021 -45464562 + (TA)n Simple_repeat Simple_repeat 2 56 0 26 30 0 0 chr2 207793287 207793320 -45463263 + AT_rich Low_complexity Low_complexity 1 33 0 370 322 8 0 chr2 207793514 207793632 -45462951 - L2 LINE L2 0 3313 3195 307 304 95 7 chr2 207793751 207793899 -45462684 + L1ME4a LINE L1 5960 6120 -1 240 35 0 0 chr2 207794664 207794693 -45461890 + (CA)n Simple_repeat Simple_repeat 2 30 0 434 323 150 36 chr2 207795561 207796035 -45460548 - L1M4 LINE L1 -2223 3923 3396 464 246 103 63 chr2 207796100 207796624 -45459959 - L1M4 LINE L1 -2879 3267 2723 204 188 0 0 chr2 207796641 207796673 -45459910 + MIR SINE MIR 209 240 -22 23 0 0 0 chr2 207797018 207797041 -45459542 + AT_rich Low_complexity Low_complexity 1 23 0 306 0 0 0 chr2 207797097 207797131 -45459452 + (TG)n Simple_repeat Simple_repeat 1 34 0 266 309 124 65 chr2 207797430 207797647 -45458936 + MLT1L LTR MaLR 38 267 -348 234 268 0 0 chr2 207797664 207797720 -45458863 + (CA)n Simple_repeat Simple_repeat 2 57 0 287 263 76 8 chr2 207797776 207797894 -45458689 + MLT1L LTR MaLR 372 497 -118 324 250 12 0 chr2 207797952 207798032 -45458551 - HAL1 LINE L1 -905 1602 1522 1868 156 16 22 chr2 207798133 207798447 -45458136 - AluJo SINE Alu 0 312 1 301 279 107 25 chr2 207799698 207799820 -45456763 + HAL1b LINE L1 309 440 -908 12809 186 14 41 chr2 207799847 207800240 -45456343 + L1PA11 LINE L1 1209 1611 -5973 180 0 0 0 chr2 207800240 207800260 -45456323 + (CAA)n Simple_repeat Simple_repeat 2 21 0 12809 186 14 41 chr2 207800260 207801689 -45454894 + L1PA11 LINE L1 1611 3076 -4508 2090 125 0 35 chr2 207801689 207802001 -45454582 + AluSx SINE Alu 6 306 -6 12809 186 14 41 chr2 207802001 207805238 -45451345 + L1PA11 LINE L1 3076 6767 -817 1155 64 0 0 chr2 207805238 207805379 -45451204 + AluY SINE Alu 161 301 -10 5551 103 39 4 chr2 207805380 207806205 -45450378 + L1PA11 LINE L1 6759 7612 0 207 161 0 0 chr2 207806205 207806236 -45450347 + polypurine Low_complexity Low_complexity 2 32 0 1114 106 0 11 chr2 207806236 207806415 -45450168 + (GAAA)n Simple_repeat Simple_repeat 4 180 0 2232 63 17 10 chr2 207806566 207806868 -45449715 + AluY SINE Alu 1 304 -7 254 326 127 23 chr2 207807650 207807871 -45448712 - L1MC4 LINE L1 -1039 7003 6760 1027 238 56 68 chr2 207808032 207808704 -45447879 + LTR41 LTR ERVL 15 767 -6 252 287 9 9 chr2 207809303 207809411 -45447172 + GA-rich Low_complexity Low_complexity 1 108 0 28 99 0 0 chr2 207809648 207809739 -45446844 + AT_rich Low_complexity Low_complexity 1 91 0 1327 274 105 17 chr2 207809935 207810402 -45446181 + MLT1J LTR MaLR 2 509 -2 232 349 12 0 chr2 207810583 207810666 -45445917 + MIR SINE MIR 69 152 -110 330 341 94 12 chr2 207810686 207810856 -45445727 - MIR SINE MIR -59 203 20 241 237 0 17 chr2 207812559 207812618 -45443965 - L2 LINE L2 0 3313 3256 689 241 84 41 chr2 207814226 207814442 -45442141 + MLT1G1 LTR MaLR 146 416 -179 747 50 10 0 chr2 207814448 207814547 -45442036 - AluS SINE Alu -211 102 3 24 32 0 0 chr2 207814674 207814705 -45441878 + AT_rich Low_complexity Low_complexity 1 31 0 558 342 11 5 chr2 207814824 207815011 -45441572 - MIR3 SINE MIR -4 204 17 266 260 104 0 chr2 207815275 207815352 -45441231 - L2 LINE L2 0 3272 3188 269 265 15 0 chr2 207815438 207815506 -45441077 + MIR SINE MIR 88 156 -106 244 348 82 65 chr2 207815625 207815834 -45440749 - L2 LINE L2 -163 3109 2892 945 244 0 10 chr2 207815834 207816043 -45440540 - MER3 DNA MER1_type -2 207 1 244 348 82 65 chr2 207816043 207816126 -45440457 - L2 LINE L2 -380 2892 2812 21 36 0 0 chr2 207816209 207816237 -45440346 + AT_rich Low_complexity Low_complexity 1 28 0 28 48 0 0 chr2 207817435 207817477 -45439106 + AT_rich Low_complexity Low_complexity 1 42 0 394 262 56 24 chr2 207818129 207818255 -45438328 - L2 LINE L2 0 3313 3184 903 136 17 227 chr2 207818531 207818884 -45437699 - L1MA7 LINE L1 -25 6266 5988 490 308 93 6 chr2 207819983 207820155 -45436428 + MIR SINE MIR 10 196 -66 434 233 88 109 chr2 207820577 207820699 -45435884 - MIR SINE MIR -73 189 71 1778 173 17 0 chr2 207820699 207820994 -45435589 - AluJo SINE Alu -12 300 1 434 233 88 109 chr2 207820994 207821064 -45435519 - MIR SINE MIR -191 71 1 448 287 42 28 chr2 207821203 207821346 -45435237 - L2 LINE L2 -6 3307 3163 614 231 7 61 chr2 207821874 207822021 -45434562 + Charlie1 DNA MER1_type 3 141 -2620 589 114 86 0 chr2 207822013 207822118 -45434465 + Charlie1 DNA MER1_type 2212 2325 -436 * 1358 172 118 25 chr2 207822134 207822426 -45434157 - MLT1A1 LTR MaLR -4 361 37 1289 185 4 4 chr2 207822426 207822658 -45433925 + MER46A DNA MER2_type 5 236 0 1358 172 118 25 chr2 207822658 207822679 -45433904 - MLT1A1 LTR MaLR -328 37 19 1780 171 72 7 chr2 207822695 207823098 -45433485 + Charlie1 DNA MER1_type 2332 2760 -1 929 273 77 80 chr2 207823212 207823809 -45432774 + MLT1G1 LTR MaLR 1 595 0 215 69 86 17 chr2 207824163 207824221 -45432362 + (TTATA)n Simple_repeat Simple_repeat 3 64 0 289 273 0 39 chr2 207824243 207824320 -45432263 - MIR SINE MIR -111 151 78 46 54 0 0 chr2 207825423 207825497 -45431086 + AT_rich Low_complexity Low_complexity 1 74 0 321 164 0 136 chr2 207825500 207825610 -45430973 + L1MD3 LINE L1 7891 7985 -10 303 375 58 0 chr2 207825657 207825761 -45430822 + MIR SINE MIR 20 129 -133 1058 172 28 0 chr2 207826418 207826598 -45429985 - MER5A DNA MER1_type -3 186 2 2045 202 49 29 chr2 207826953 207827439 -45429144 - MLT1D LTR MaLR -9 496 1 1089 270 70 0 chr2 207827559 207827859 -45428724 + L1ME1 LINE L1 4 324 -6535 903 326 3 20 chr2 207827896 207828190 -45428393 + L1ME1 LINE L1 526 814 -6045 * 2639 230 87 20 chr2 207828186 207829108 -45427475 + L1MB8 LINE L1 237 1096 -5863 198 0 0 0 chr2 207829108 207829130 -45427453 + (TA)n Simple_repeat Simple_repeat 2 23 0 2639 230 87 20 chr2 207829130 207830015 -45426568 + L1MB8 LINE L1 1096 2326 -4633 198 0 0 0 chr2 207830034 207830056 -45426527 + (CA)n Simple_repeat Simple_repeat 2 23 0 318 297 18 77 chr2 207830298 207830598 -45425985 + L1MB8 LINE L1 2510 2791 -4347 2719 198 54 57 chr2 207830598 207830994 -45425589 - MER72 LTR ERV1 0 722 327 2451 62 0 0 chr2 207830994 207831299 -45425284 - AluY SINE Alu -6 305 1 2719 198 54 57 chr2 207831299 207831626 -45424957 - MER72 LTR ERV1 -395 327 1 318 297 18 77 chr2 207831626 207831652 -45424931 + L1MB8 LINE L1 2791 2817 -4321 36 23 0 0 chr2 207831677 207831720 -45424863 + AT_rich Low_complexity Low_complexity 1 43 0 10054 226 70 13 chr2 207831744 207834798 -45421785 + L1MB8 LINE L1 2956 6260 -729 186 43 0 0 chr2 207834798 207834821 -45421762 + (CA)n Simple_repeat Simple_repeat 2 24 0 10054 226 70 13 chr2 207834821 207835596 -45420987 + L1MB8 LINE L1 6260 6989 0 216 0 0 0 chr2 207835689 207835713 -45420870 + (CA)n Simple_repeat Simple_repeat 2 25 0 246 232 146 24 chr2 207837557 207837639 -45418944 - L2 LINE L2 0 3313 3222 383 348 91 5 chr2 207837640 207837827 -45418756 - MIR SINE MIR -28 234 32 576 335 69 55 chr2 207838463 207839323 -45417260 + L2 LINE L2 2100 3263 -9 405 311 160 9 chr2 207839644 207839856 -45416727 - MLT1J1 LTR MaLR -136 310 67 212 149 21 0 chr2 207840104 207840151 -45416432 + (TA)n Simple_repeat Simple_repeat 2 49 0 868 291 103 26 chr2 207840731 207841352 -45415231 + L1ME1 LINE L1 1328 1996 -5142 418 227 53 27 chr2 207841387 207841537 -45415046 + L1ME1 LINE L1 1946 2099 -4858 32 26 0 0 chr2 207841646 207841685 -45414898 + AT_rich Low_complexity Low_complexity 1 39 0 1033 234 57 74 chr2 207841751 207842338 -45414245 + L1ME1 LINE L1 2002 2774 -4364 432 203 11 3 chr2 207842344 207842450 -45414133 + L1MA8 LINE L1 6179 6283 -8 4293 8 0 0 chr2 207842462 207842945 -45413638 - L1PA2 LINE L1 -260 5895 5413 2015 19 19 12 chr2 207842946 207843204 -45413379 + L1PA2 LINE L1 5886 6145 -10 27 35 0 0 chr2 207843207 207843236 -45413347 + AT_rich Low_complexity Low_complexity 1 29 0 1780 84 8 4 chr2 207843382 207843620 -45412963 - AluSp SINE Alu -74 239 1 934 255 30 104 chr2 207843633 207844357 -45412226 + L1ME1 LINE L1 2877 3535 -3422 3070 195 13 7 chr2 207844357 207844397 -45412186 - MLT2B3 LTR ERVL 0 554 516 198 71 0 0 chr2 207844397 207844425 -45412158 + (TA)n Simple_repeat Simple_repeat 2 29 0 3070 195 13 7 chr2 207844425 207844933 -45411650 - MLT2B3 LTR ERVL -38 516 3 3309 244 42 23 chr2 207845101 207846361 -45410222 + L1MC4a LINE L1 6585 7985 -1 2345 211 34 107 chr2 207846366 207847056 -45409527 + L1ME1 LINE L1 5411 5976 -1001 1476 124 27 4 chr2 207847056 207847314 -45409269 - L1MA5 LINE L1 -2 6298 6035 2345 211 34 107 chr2 207847314 207847894 -45408689 + L1ME1 LINE L1 5976 6597 -380 867 225 66 113 chr2 207847894 207847982 -45408601 - MER34B LTR ERV1 -7 558 467 1606 180 3 24 chr2 207847982 207848271 -45408312 - AluJb SINE Alu -24 288 6 867 225 66 113 chr2 207848271 207848773 -45407810 - MER34B LTR ERV1 -98 467 5 621 254 12 0 chr2 207848782 207848947 -45407636 + L1ME1 LINE L1 6616 6782 -195 21 100 0 0 chr2 207849860 207849930 -45406653 + AT_rich Low_complexity Low_complexity 1 70 0 274 284 30 0 chr2 207850577 207850644 -45405939 - L2 LINE L2 -1 3312 3244 288 282 26 0 chr2 207850771 207850849 -45405734 - MIR3 SINE MIR -7 201 122 270 338 71 32 chr2 207853296 207853450 -45403133 + ERVL LTR ERVL 562 721 -5043 1429 359 60 17 chr2 207853827 207855297 -45401286 + ERVL LTR ERVL 2085 3678 -1976 945 327 58 26 chr2 207855417 207855952 -45400631 + ERVL LTR ERVL 3901 4452 -1312 2467 95 11 0 chr2 207856485 207856834 -45399749 - L1PA13 LINE L1 -4 6159 5807 579 300 80 57 chr2 207856834 207856967 -45399616 + ERVL LTR ERVL 4711 4839 -925 1733 157 73 20 chr2 207856967 207857323 -45399260 + THE1C LTR MaLR 1 375 0 579 300 80 57 chr2 207857323 207857758 -45398825 + ERVL LTR ERVL 4839 5332 -432 303 285 8 57 chr2 207858323 207858446 -45398137 + LTR16C LTR ERVL 371 487 -4 618 296 133 0 chr2 207858885 207859081 -45397502 - MIR SINE MIR -37 225 4 2396 196 56 8 chr2 207859116 207859637 -45396946 - L1MB3 LINE L1 -8 6175 5630 2564 199 51 21 chr2 207859830 207860707 -45395876 - L1MB3 LINE L1 -585 5586 4682 215 159 43 14 chr2 207860956 207861025 -45395558 + (TATAA)n Simple_repeat Simple_repeat 1 71 0 289 193 12 84 chr2 207861079 207861162 -45395421 - MLT1J LTR MaLR -45 466 390 2090 107 0 21 chr2 207862396 207862717 -45393866 - AluSx SINE Alu 0 315 1 1130 217 94 38 chr2 207862883 207863150 -45393433 + AluJo SINE Alu 1 282 -30 2084 147 124 50 chr2 207863170 207863280 -45393303 + MLT2B1 LTR ERVL 1 101 -419 2245 123 0 0 chr2 207863280 207863588 -45392995 + AluSx SINE Alu 1 308 -4 2084 147 124 50 chr2 207863588 207863920 -45392663 + MLT2B1 LTR ERVL 101 476 -44 334 104 0 0 chr2 207864089 207864137 -45392446 + MLT2B1 LTR ERVL 473 520 0 294 358 103 52 chr2 207864140 207864993 -45391590 + L2 LINE L2 2364 3271 -1 295 143 0 0 chr2 207865727 207865769 -45390814 + Tigger5 DNA MER2_type 37 78 -2245 287 189 19 0 chr2 207865772 207865825 -45390758 - Tigger5 DNA MER2_type -6 2317 2264 342 327 78 28 chr2 207866212 207866429 -45390154 + HAL1b LINE L1 457 684 -664 23 0 0 0 chr2 207867100 207867123 -45389460 + AT_rich Low_complexity Low_complexity 1 23 0 24 85 0 0 chr2 207867194 207867253 -45389330 + AT_rich Low_complexity Low_complexity 1 59 0 310 326 11 0 chr2 207867611 207867703 -45388880 + L2 LINE L2 3199 3291 -22 688 263 84 12 chr2 207867960 207868283 -45388300 + L1M4 LINE L1 3592 3937 -2209 241 264 35 0 chr2 207868494 207868581 -45388002 - MLT1L LTR MaLR -2 613 524 1909 153 49 25 chr2 207868596 207868962 -45387621 + THE1C LTR MaLR 1 375 0 366 291 80 33 chr2 207869292 207869443 -45387140 + MIR SINE MIR 23 180 -82 321 187 0 0 chr2 207871457 207871532 -45385051 + (TGGA)n Simple_repeat Simple_repeat 4 78 0 283 246 68 25 chr2 207872656 207872774 -45383809 - L1 LINE L1 -1922 4224 4102 436 248 10 0 chr2 207872783 207872884 -45383699 + MIR SINE MIR 79 180 -82 221 291 0 58 chr2 207873338 207873424 -45383159 - MIR3 SINE MIR -10 198 118 266 179 167 36 chr2 207873514 207873598 -45382985 - L2 LINE L2 0 3313 3219 528 334 129 36 chr2 207873784 207873951 -45382632 + L2 LINE L2 2567 2717 -596 1155 281 44 44 chr2 207873951 207874499 -45382084 - MLT1H LTR MaLR -1 548 1 528 334 129 36 chr2 207874499 207874998 -45381585 + L2 LINE L2 2717 3299 -14 349 319 78 18 chr2 207875007 207875173 -45381410 + MIR3 SINE MIR 10 185 -23 853 267 50 5 chr2 207879608 207879829 -45376754 - MIR SINE MIR -19 243 13 255 31 0 0 chr2 207880145 207880177 -45376406 + (CA)n Simple_repeat Simple_repeat 2 33 0 437 321 50 0 chr2 207880346 207880486 -45376097 + MIR SINE MIR 29 175 -87 1571 147 107 10 chr2 207880499 207880799 -45375784 - Zaphod DNA AcHobo -25 4006 3678 3341 316 35 25 chr2 207880873 207882482 -45374101 + L1PA13 LINE L1 3 1627 -5236 1002 154 30 6 chr2 207882459 207882628 -45373955 + L1PB3 LINE L1 1 173 -6031 * 5085 186 76 21 chr2 207882630 207884667 -45371916 + L1PB3 LINE L1 324 2469 -3734 * 9826 179 13 11 chr2 207884655 207887672 -45368911 + L1PB3 LINE L1 3181 6204 -7 1407 260 83 88 chr2 207887750 207888736 -45367847 - Zaphod DNA AcHobo -3041 990 10 281 241 0 120 chr2 207888977 207889085 -45367498 - L2 LINE L2 -2 3270 3176 946 220 19 19 chr2 207889089 207889303 -45367280 + MER20 DNA MER1_type 1 214 -5 307 237 8 102 chr2 207889526 207889644 -45366939 + MLT1D LTR MaLR 1 107 -398 337 239 8 94 chr2 207890045 207890162 -45366421 + MLT1D LTR MaLR 1 107 -398 654 213 65 17 chr2 207890243 207890422 -45366161 + L1PA13 LINE L1 2992 3186 -3017 1820 139 51 51 chr2 207890422 207890797 -45365786 + THE1C LTR MaLR 1 375 0 654 213 65 17 chr2 207890797 207890847 -45365736 + L1PA13 LINE L1 3186 3232 -2971 644 164 8 49 chr2 207890849 207890971 -45365612 + THE1C LTR MaLR 259 375 0 10974 176 21 12 chr2 207890971 207893107 -45363476 + L1PA13 LINE L1 3182 5335 -868 1823 164 131 13 chr2 207893107 207893490 -45363093 - MSTA LTR MaLR 0 428 1 9075 148 14 35 chr2 207893490 207895102 -45361481 - MSTA-int LTR MaLR 0 1580 3 1714 186 129 11 chr2 207895105 207895486 -45361097 - MSTA LTR MaLR 0 428 3 4586 134 49 1 chr2 207895486 207896245 -45360338 + L1PA13 LINE L1 5425 6219 -1 1196 220 97 54 chr2 207896267 207896639 -45359944 + MLT1D LTR MaLR 118 505 0 1810 175 0 7 chr2 207899642 207899939 -45356644 - AluSx SINE Alu -17 295 1 369 0 0 0 chr2 207901903 207901944 -45354639 + (GA)n Simple_repeat Simple_repeat 2 42 0 537 287 168 25 chr2 207902801 207903045 -45353538 - MLT1J2 LTR MaLR -167 279 1 301 227 0 31 chr2 207903547 207903644 -45352939 + (CGGG)n Simple_repeat Simple_repeat 3 96 0 423 83 0 0 chr2 207903734 207903794 -45352789 + (GGAA)n Simple_repeat Simple_repeat 1 60 0 263 378 9 9 chr2 207903883 207903994 -45352589 + LTR67 LTR ERVL 101 211 -346 248 246 0 0 chr2 207905184 207905249 -45351334 + (TA)n Simple_repeat Simple_repeat 2 66 0 415 350 34 31 chr2 207905635 207905926 -45350657 + ERVL LTR ERVL 1507 1798 -3966 1960 327 92 41 chr2 207905936 207907251 -45349332 + ERVL LTR ERVL 1904 3321 -2443 907 251 47 9 chr2 207907251 207907466 -45349117 + MER58A DNA MER1_type 1 223 -1 1960 327 92 41 chr2 207907466 207907800 -45348783 + ERVL LTR ERVL 3321 3637 -2127 606 317 88 30 chr2 207908067 207908395 -45348188 + ERVL LTR ERVL 3935 4281 -1483 1932 130 0 11 chr2 207909179 207909464 -45347119 + AluSx SINE Alu 3 284 -28 396 0 0 0 chr2 207909477 207909521 -45347062 + (GAA)n Simple_repeat Simple_repeat 2 45 0 1982 139 3 60 chr2 207909546 207909913 -45346670 - MER7A DNA MER2_type -1 345 2 1303 280 42 45 chr2 207910250 207910932 -45345651 + L1ME LINE L1 4515 5197 -949 2091 155 0 0 chr2 207910932 207911242 -45345341 + AluSx SINE Alu 1 310 -2 1303 280 42 45 chr2 207911242 207911280 -45345303 + L1ME LINE L1 5197 5234 -912 1957 200 121 11 chr2 207911280 207911735 -45344848 - MLT1D LTR MaLR 0 505 1 1303 280 42 45 chr2 207911735 207911794 -45344789 + L1ME LINE L1 5234 5293 -853 393 102 0 0 chr2 207911864 207911923 -45344660 + (CA)n Simple_repeat Simple_repeat 2 60 0 642 312 10 0 chr2 207912295 207912494 -45344089 - MIR SINE MIR -45 217 17 383 291 86 82 chr2 207912731 207913136 -45343447 + L1ME LINE L1 5300 5706 -415 1846 108 86 4 chr2 207913588 207913866 -45342717 + AluSg SINE Alu 1 301 -9 7839 154 40 18 chr2 207913880 207916308 -45340275 - L1MA8 LINE L1 -17 6274 3785 1950 141 0 3 chr2 207916308 207916629 -45339954 - AluSg SINE Alu 0 320 1 9830 83 7 1 chr2 207916643 207918745 -45337838 - L1PA7 LINE L1 -6 6148 4028 3725 191 25 4 chr2 207918770 207919575 -45337008 - L1 LINE L1 -2078 5028 4207 * 7628 223 63 40 chr2 207919554 207921559 -45335024 - L1 LINE L1 -4978 2052 1 385 244 171 16 chr2 207923061 207923184 -45333399 + MIR SINE MIR 89 230 -32 341 310 117 29 chr2 207923431 207923670 -45332913 - MLT1K LTR MaLR -306 282 23 21 36 0 0 chr2 207923840 207923868 -45332715 + AT_rich Low_complexity Low_complexity 1 28 0 571 242 174 0 chr2 207925655 207925833 -45330750 + MIR SINE MIR 44 252 -10 249 258 11 0 chr2 207925969 207926058 -45330525 + L1MC4 LINE L1 6614 6703 -1339 * 251 244 49 0 chr2 207926034 207926116 -45330467 - L1MC4 LINE L1 -1343 6699 6614 315 322 0 0 chr2 207926120 207926210 -45330373 + L1MC4 LINE L1 6614 6703 -1339 * 320 232 98 0 chr2 207926174 207926256 -45330327 - L1MC4 LINE L1 -1339 6703 6614 253 297 0 0 chr2 207926256 207926320 -45330263 + (TATATG)n Simple_repeat Simple_repeat 4 67 0 1051 308 160 19 chr2 207926342 207927191 -45329392 - L2 LINE L2 0 3313 2339 21 36 0 0 chr2 207929561 207929589 -45326994 + AT_rich Low_complexity Low_complexity 1 28 0 443 305 153 5 chr2 207929768 207929971 -45326612 + MIR SINE MIR 18 250 -12 303 28 0 0 chr2 207930132 207930168 -45326415 + (TG)n Simple_repeat Simple_repeat 1 36 0 1935 204 65 56 chr2 207931450 207932054 -45324529 + L1ME2 LINE L1 5546 6154 -10 234 62 0 0 chr2 207932946 207932978 -45323605 + (TTCA)n Simple_repeat Simple_repeat 2 33 0 196 283 50 0 chr2 207932979 207933039 -45323544 - MIR SINE MIR -4 258 196 * 319 288 63 34 chr2 207933024 207933229 -45323354 - L2 LINE L2 -108 3205 2995 275 177 16 0 chr2 207933395 207933457 -45323126 + CT-rich Low_complexity Low_complexity 3 65 0 1977 199 13 10 chr2 207934738 207935135 -45321448 + L1PB4 LINE L1 5747 6144 -12 24 0 0 0 chr2 207935604 207935628 -45320955 + AT_rich Low_complexity Low_complexity 1 24 0 6149 32 1 0 chr2 207935836 207936875 -45319708 - L1PA3 LINE L1 -481 5674 4635 4088 37 0 0 chr2 207936875 207937362 -45319221 + L1PA3 LINE L1 5665 6152 -3 36985 90 15 10 chr2 207937387 207943039 -45313544 + L1P2 LINE L1 6 5681 -473 753 285 119 32 chr2 207945102 207945506 -45311077 + MLT1J LTR MaLR 3 441 -70 692 284 59 44 chr2 207945514 207945610 -45310973 + L2 LINE L2 2888 2981 -332 2085 142 24 39 chr2 207945610 207945991 -45310592 - THE1C LTR MaLR 0 375 1 692 284 59 44 chr2 207945991 207946215 -45310368 + L2 LINE L2 2981 3213 -100 286 296 81 35 chr2 207946375 207946547 -45310036 - MIR SINE MIR -10 252 73 23 0 0 0 chr2 207946985 207947008 -45309575 + AT_rich Low_complexity Low_complexity 1 23 0 256 352 28 35 chr2 207947332 207947474 -45309109 + MIR SINE MIR 122 262 0 201 325 84 63 chr2 207948386 207948623 -45307960 + L2 LINE L2 1526 1767 -1547 189 0 0 0 chr2 207948794 207948815 -45307768 + (A)n Simple_repeat Simple_repeat 1 21 0 255 326 172 7 chr2 207948817 207949096 -45307487 + L2 LINE L2 1880 2204 -1110 474 316 83 90 chr2 207949128 207950071 -45306512 + L2 LINE L2 2369 3313 0 254 189 158 102 chr2 207950335 207950462 -45306121 + MLT1J LTR MaLR 420 553 -2 759 290 66 41 chr2 207950507 207951391 -45305192 - L1ME LINE L1 -643 5502 4599 2063 309 96 22 chr2 207951431 207951574 -45305009 - L1MEd LINE L1 -1835 4294 4163 2496 109 44 39 chr2 207951574 207952006 -45304577 - MER57B LTR ERV1 0 434 1 2063 309 96 22 chr2 207952006 207954014 -45302569 - L1MEd LINE L1 -1966 4163 2016 418 269 133 28 chr2 207954366 207954886 -45301697 - L1MEd LINE L1 -914 1576 991 296 249 113 92 chr2 207954904 207955089 -45301494 - L1ME3A LINE L1 -15 6155 5967 563 258 7 0 chr2 207955131 207955282 -45301301 - L1ME3A LINE L1 -208 5962 5811 1347 208 48 10 chr2 207955412 207955705 -45300878 - AluJo SINE Alu -8 304 1 640 317 104 47 chr2 207955826 207956674 -45299909 - L1MEd LINE L1 -5155 964 69 237 233 215 53 chr2 207957816 207958044 -45298539 - L1ME4a LINE L1 -14 6107 5843 26 64 0 0 chr2 207958065 207958112 -45298471 + AT_rich Low_complexity Low_complexity 1 47 0 24 32 0 0 chr2 207958215 207958246 -45298337 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr2 207958260 207958281 -45298302 + AT_rich Low_complexity Low_complexity 1 21 0 2461 69 3 0 chr2 207959325 207959630 -45296953 + AluY SINE Alu 1 306 -5 1227 219 10 21 chr2 207960179 207960467 -45296116 + AluSg SINE Alu 3 287 -13 1893 146 3 3 chr2 207960998 207961299 -45295284 + AluSx SINE Alu 1 301 -11 348 270 99 9 chr2 207962811 207962922 -45293661 - MER103 DNA DNA -45 121 1 2307 231 71 46 chr2 207962979 207963671 -45292912 + HsTC2c DNA Tc2 21 729 0 2078 114 3 3 chr2 207964164 207964461 -45292122 - AluY SINE Alu -14 297 1 238 281 37 61 chr2 207964890 207964972 -45291611 - L3 LINE CR1 -105 1472 1393 247 342 0 0 chr2 207965688 207965764 -45290819 + L2 LINE L2 3227 3302 -11 324 233 93 0 chr2 207965822 207965908 -45290675 + L1ME3 LINE L1 5793 5886 -284 1003 174 36 10 chr2 207965910 207966106 -45290477 + L1MA1 LINE L1 13 213 -7352 1198 108 133 0 chr2 207966120 207966315 -45290268 - MSTA LTR MaLR -207 221 1 8877 122 15 17 chr2 207966315 207967965 -45288618 + L1MA1 LINE L1 2178 3824 -3741 582 94 0 0 chr2 207967999 207968095 -45288488 + L1 LINE L1 4234 4329 -1817 5179 191 11 26 chr2 207968096 207969238 -45287345 + L1MA1 LINE L1 3818 4942 -2623 6321 179 26 65 chr2 208019241 208019432 -45237151 + L1MA1 LINE L1 5186 5383 -2338 2287 95 0 7 chr2 208019432 208019736 -45236847 + AluSc SINE Alu 1 302 -7 6321 179 26 65 chr2 208019736 208022189 -45234394 + L1MA1 LINE L1 5383 7716 -5 939 233 20 21 chr2 208022194 208022464 -45234119 + L1ME3 LINE L1 5880 6154 -8 343 350 85 15 chr2 208022486 208022686 -45233897 - L3 LINE CR1 -178 1399 1186 1538 192 72 0 chr2 208022861 208023168 -45233415 + MLT1-int LTR MaLR 381 709 -662 307 206 0 0 chr2 208023160 208023223 -45233360 + MLT1-int LTR MaLR 825 887 -484 * 302 287 11 0 chr2 208023284 208023378 -45233205 + MLT-int LTR MaLR 676 770 -965 191 256 182 40 chr2 208023387 208023563 -45233020 + L2 LINE L2 2336 2536 -778 458 283 22 57 chr2 208023619 208023827 -45232756 - MIR SINE MIR -39 223 23 594 0 0 0 chr2 208023862 208023928 -45232655 + (TTTC)n Simple_repeat Simple_repeat 1 66 0 183 287 103 35 chr2 208024032 208024119 -45232464 + L2 LINE L2 2695 2787 -527 1721 125 66 28 chr2 208024262 208024549 -45232034 + MSTC LTR MaLR 1 298 -130 1030 41 0 0 chr2 208024549 208024722 -45231861 + L1PA3 LINE L1 6011 6183 0 839 114 64 14 chr2 208024733 208024873 -45231710 + MSTC LTR MaLR 275 421 -7 1365 213 115 38 chr2 208025609 208026088 -45230495 + L1ME2 LINE L1 5595 6110 -54 3148 91 2 7 chr2 208026099 208026549 -45230034 + LTR7 LTR ERV1 1 448 -2 15652 85 28 11 chr2 208026551 208028781 -45227802 + HERVH LTR ERV1 1 2267 -5446 300 53 0 0 chr2 208028950 208028988 -45227595 + (CA)n Simple_repeat Simple_repeat 1 38 0 380 317 31 12 chr2 208030045 208030206 -45226377 + L1MC4 LINE L1 7790 7953 -89 765 182 62 53 chr2 208031406 208031615 -45224968 - L1MB8 LINE L1 -6 6172 5962 1361 177 27 108 chr2 208032188 208032595 -45223988 + MLT1A2 LTR MaLR 1 374 0 942 180 22 27 chr2 208032759 208032942 -45223641 - MER20 DNA MER1_type 0 219 38 251 234 62 16 chr2 208034102 208034166 -45222417 + MIR SINE MIR 106 172 -90 209 171 0 0 chr2 208034273 208034308 -45222275 + GA-rich Low_complexity Low_complexity 1 35 0 537 270 25 5 chr2 208036329 208036529 -45220054 + L1MD2 LINE L1 2561 2764 -3382 3286 51 0 2 chr2 208036545 208036955 -45219628 + L1PA5 LINE L1 5745 6153 -1 23935 92 7 3 chr2 208036955 208037562 -45219021 + L1PA7 LINE L1 1851 2454 -3692 405 0 0 0 chr2 208037562 208037607 -45218976 + (TA)n Simple_repeat Simple_repeat 2 46 0 23935 92 7 3 chr2 208037607 208040439 -45216144 + L1PA7 LINE L1 2454 5302 -844 388 107 27 13 chr2 208040601 208040676 -45215907 - L1P LINE L1 -1332 4814 4739 3061 88 2 0 chr2 208040676 208041094 -45215489 + L1PA7 LINE L1 5719 6138 -16 219 36 0 0 chr2 208041097 208041125 -45215458 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 5519 228 57 28 chr2 208041127 208042917 -45213666 + L1MD2 LINE L1 3416 5341 -1018 958 169 0 13 chr2 208042917 208043071 -45213512 + FRAM SINE Alu 1 152 -14 5519 228 57 28 chr2 208043071 208044097 -45212486 + L1MD2 LINE L1 5341 6335 -24 1342 239 129 24 chr2 208044752 208045209 -45211374 - MLT1D LTR MaLR 0 505 1 270 287 40 10 chr2 208045501 208045602 -45210981 + L1ME4a LINE L1 5349 5452 -669 308 250 61 45 chr2 208045959 208046091 -45210492 - L1ME LINE L1 -338 5824 5691 415 287 17 9 chr2 208046145 208046260 -45210323 + L1ME4a LINE L1 5533 5648 -473 548 262 131 12 chr2 208046273 208046441 -45210142 + MER5A DNA MER1_type 2 189 0 345 257 55 55 chr2 208046466 208046668 -45209915 + L1ME4a LINE L1 5690 5891 -230 186 43 0 0 chr2 208046766 208046789 -45209794 + (TA)n Simple_repeat Simple_repeat 2 24 0 21 36 0 0 chr2 208047706 208047734 -45208849 + AT_rich Low_complexity Low_complexity 1 28 0 568 248 7 48 chr2 208047940 208048085 -45208498 - L2 LINE L2 -2 3311 3173 211 337 138 65 chr2 208048164 208048295 -45208288 - L2 LINE L2 -338 2976 2856 2053 111 4 4 chr2 208048295 208048574 -45208009 + AluSq SINE Alu 23 301 -12 211 337 138 65 chr2 208048574 208049131 -45207452 - L2 LINE L2 -458 2856 2238 340 335 77 23 chr2 208049267 208049488 -45207095 - L1ME4a LINE L1 -217 5904 5672 1458 168 44 50 chr2 208049839 208050136 -45206447 + AluJo SINE Alu 16 310 -2 565 307 21 37 chr2 208051227 208051468 -45205115 - MLT1I LTR MaLR -141 268 32 300 266 18 62 chr2 208052432 208052545 -45204038 + MER102a DNA MER1_type 223 330 0 270 231 75 27 chr2 208052820 208052919 -45203664 - MIR SINE MIR -41 167 64 605 240 35 30 chr2 208053307 208053540 -45203043 + L1MC4a LINE L1 5673 5827 -341 311 221 12 0 chr2 208053552 208053638 -45202945 + (TA)n Simple_repeat Simple_repeat 1 87 0 263 319 56 19 chr2 208053843 208054003 -45202580 + L1MC4a LINE L1 6078 6243 -1565 1396 206 133 36 chr2 208054880 208055240 -45201343 - MSTD LTR MaLR -1 395 1 4338 211 98 34 chr2 208055240 208056270 -45200313 - MSTD-int LTR MaLR 0 1735 640 2428 221 10 2 chr2 208056269 208056771 -45199812 - MSTD-int LTR MaLR -1229 506 1 * 1509 196 43 50 chr2 208056772 208057171 -45199412 - MSTD LTR MaLR 0 396 1 6250 133 46 25 chr2 208057206 208058622 -45197961 + L1MC1 LINE L1 4890 6333 0 1393 206 93 108 chr2 208060374 208060976 -45195607 + MLT1E LTR MaLR 1 593 0 2049 160 25 0 chr2 208060976 208061331 -45195252 - MER47A DNA MER2_type 0 366 1 229 299 0 26 chr2 208061562 208061639 -45194944 + MLT1I LTR MaLR 73 147 -262 245 226 179 36 chr2 208061786 208061870 -45194713 + MLT1I LTR MaLR 281 376 -33 26 30 0 0 chr2 208063377 208063410 -45193173 + AT_rich Low_complexity Low_complexity 1 33 0 338 296 42 7 chr2 208064951 208065093 -45191490 + MIR SINE MIR 60 206 -56 314 301 128 48 chr2 208065369 208065653 -45190930 - L1ME4a LINE L1 -220 5901 5594 1736 160 33 0 chr2 208065653 208065766 -45190817 + AluSx SINE Alu 5 113 -199 186 43 0 0 chr2 208065766 208065789 -45190794 + (CAAA)n Simple_repeat Simple_repeat 4 26 0 1736 160 33 0 chr2 208065789 208065950 -45190633 + AluSx SINE Alu 113 288 -24 2392 194 33 6 chr2 208066116 208066627 -45189956 - L1MD1 LINE L1 -10 6232 5708 4464 236 39 34 chr2 208066628 208067709 -45188874 - L1MD1 LINE L1 -2016 4130 3039 2057 111 7 0 chr2 208067709 208068037 -45188546 - AluSx SINE Alu 0 330 1 4464 236 39 34 chr2 208068037 208068384 -45188199 - L1MD1 LINE L1 -3107 3039 2695 371 284 172 9 chr2 208068470 208068702 -45187881 - L1ME4a LINE L1 -757 5389 5120 24 53 0 0 chr2 208068743 208068781 -45187802 + AT_rich Low_complexity Low_complexity 1 38 0 466 265 172 5 chr2 208068946 208069150 -45187433 - MIR SINE MIR 0 262 25 212 253 80 13 chr2 208069300 208069375 -45187208 - L2 LINE L2 -8 3264 3185 1218 156 80 23 chr2 208069784 208070047 -45186536 - L1MB8 LINE L1 -1 6177 5900 2433 191 84 75 chr2 208070746 208071532 -45185051 - L1ME2 LINE L1 -31 6133 5341 1409 224 7 17 chr2 208074093 208074392 -45182191 + AluJo SINE Alu 1 296 -16 414 268 0 32 chr2 208074765 208074869 -45181714 + MIR SINE MIR 79 180 -82 1620 201 37 14 chr2 208074869 208075222 -45181361 + MLT1A1 LTR MaLR 5 365 0 414 268 0 32 chr2 208075222 208075240 -45181343 + MIR SINE MIR 180 197 -65 529 311 35 87 chr2 208075248 208075673 -45180910 + L2 LINE L2 2863 3265 -7 23 33 0 0 chr2 208076189 208076219 -45180364 + AT_rich Low_complexity Low_complexity 1 30 0 4022 85 2 23 chr2 208076659 208077262 -45179321 + HERVH LTR ERV1 2406 2995 -4718 876 142 7 0 chr2 208077241 208077389 -45179194 + HERVH LTR ERV1 3140 3288 -4425 * 8553 102 2 7 chr2 208077381 208079107 -45177476 + HERVH LTR ERV1 3492 5273 -1818 1374 139 19 0 chr2 208079111 208079327 -45177256 + HERVH LTR ERV1 5600 5819 -1894 * 2416 102 42 13 chr2 208079325 208079706 -45176877 + HERVH LTR ERV1 7322 7713 0 3201 77 23 7 chr2 208079706 208080147 -45176436 + LTR7 LTR ERV1 1 448 -2 189 0 0 0 chr2 208080290 208080311 -45176272 + (A)n Simple_repeat Simple_repeat 1 21 0 2111 107 0 36 chr2 208081899 208082207 -45174376 + AluSg SINE Alu 1 297 -13 1048 135 42 92 chr2 208082594 208082854 -45173729 + L1MB7 LINE L1 5938 6184 0 2141 165 31 11 chr2 208083045 208083427 -45173156 - MLT1B LTR MaLR 0 390 1 261 0 0 0 chr2 208083467 208083496 -45173087 + (TA)n Simple_repeat Simple_repeat 1 29 0 1053 87 0 0 chr2 208083602 208083740 -45172843 - MLT2A1 LTR ERVL -306 138 1 204 319 82 28 chr2 208084056 208084238 -45172345 + L3 LINE CR1 965 1156 -421 529 219 62 0 chr2 208084259 208084387 -45172196 + MLT1J LTR MaLR 2 137 -374 1732 133 4 4 chr2 208084396 208084659 -45171924 - AluY SINE Alu 0 311 49 240 268 0 0 chr2 208084702 208084758 -45171825 - MIR SINE MIR -8 254 199 242 28 0 28 chr2 208084763 208084799 -45171784 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 575 151 0 0 chr2 208084821 208084907 -45171676 - AluJ/FLAM SINE Alu -225 87 2 188 329 25 13 chr2 208084942 208085021 -45171562 + L2 LINE L2 3234 3313 0 353 167 17 0 chr2 208085368 208085428 -45171155 + U7 snRNA snRNA 2 62 -1 219 139 0 0 chr2 208085449 208085485 -45171098 + (TA)n Simple_repeat Simple_repeat 2 37 0 201 74 0 0 chr2 208086310 208086337 -45170246 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 2248 92 3 32 chr2 208086435 208086749 -45169834 - AluSc SINE Alu -4 305 1 180 0 0 0 chr2 208087109 208087129 -45169454 + (CA)n Simple_repeat Simple_repeat 1 20 0 1890 153 55 0 chr2 208087666 208087992 -45168591 + MER7A DNA MER2_type 2 343 -3 456 286 77 29 chr2 208088050 208088323 -45168260 - L1ME LINE L1 -319 5802 5517 23 0 0 0 chr2 208088446 208088469 -45168114 + AT_rich Low_complexity Low_complexity 1 23 0 327 273 159 15 chr2 208088489 208088621 -45167962 + L2 LINE L2 3163 3313 0 452 116 11 105 chr2 208088678 208088773 -45167810 + MER67A LTR ERV1 1 86 -457 2208 203 65 55 chr2 208088773 208089424 -45167159 + MER67B LTR ERV1 5 661 0 568 256 15 15 chr2 208089955 208090088 -45166495 - MIR SINE MIR -122 140 8 1736 152 8 102 chr2 208091483 208091865 -45164718 + MLT1B LTR MaLR 1 346 -44 2266 153 38 19 chr2 208092309 208092727 -45163856 + MSTB LTR MaLR 1 426 0 612 201 134 7 chr2 208094812 208094961 -45161622 + MIR SINE MIR 21 188 -74 260 299 144 65 chr2 208095090 208095368 -45161215 + L2 LINE L2 2934 3233 -39 235 204 23 0 chr2 208095497 208095541 -45161042 - HAL1 LINE L1 -1148 1359 1315 24 0 0 0 chr2 208096395 208096419 -45160164 + AT_rich Low_complexity Low_complexity 1 24 0 582 240 53 0 chr2 208096720 208096870 -45159713 + MIR SINE MIR 100 257 -5 21 36 0 0 chr2 208097441 208097469 -45159114 + AT_rich Low_complexity Low_complexity 1 28 0 216 286 0 14 chr2 208099115 208099185 -45157398 + L2 LINE L2 3158 3226 -87 216 0 0 0 chr2 208099245 208099269 -45157314 + (TGAA)n Simple_repeat Simple_repeat 4 27 0 29 28 0 0 chr2 208099363 208099399 -45157184 + AT_rich Low_complexity Low_complexity 1 36 0 257 294 26 33 chr2 208099685 208099838 -45156745 + L2 LINE L2 2245 2396 -918 458 302 42 45 chr2 208099916 208100181 -45156402 + L2 LINE L2 2394 2657 -657 4385 111 11 1 chr2 208100474 208101125 -45155458 - L1PA13 LINE L1 0 6163 5507 210 348 85 12 chr2 208101345 208101509 -45155074 + L2 LINE L2 2585 2760 -554 397 249 104 46 chr2 208101767 208101940 -45154643 + MIR SINE MIR 13 195 -67 427 336 21 7 chr2 208102999 208103139 -45153444 - MIR SINE MIR -117 145 4 571 254 14 14 chr2 208103185 208103323 -45153260 + MIR SINE MIR 32 169 -93 7874 183 14 29 chr2 208103328 208105141 -45151442 - L1 LINE L1 -1153 4993 3209 2473 154 25 27 chr2 208105141 208106281 -45150302 + L1MA10 LINE L1 5089 6334 0 763 222 96 15 chr2 208107753 208108023 -45148560 + MLT1C LTR MaLR 94 385 -82 356 214 0 68 chr2 208108243 208108346 -45148237 + L1MC4 LINE L1 6608 6703 -1339 198 0 0 0 chr2 208108354 208108376 -45148207 + (GA)n Simple_repeat Simple_repeat 2 23 0 1861 158 0 0 chr2 208108376 208108649 -45147934 - AluSx SINE Alu -39 273 1 456 301 70 45 chr2 208109118 208109245 -45147338 - MIR SINE MIR -31 231 96 2676 142 14 0 chr2 208109245 208109667 -45146916 + MSTA LTR MaLR 1 428 0 456 301 70 45 chr2 208109667 208109738 -45146845 - MIR SINE MIR -166 96 28 180 267 0 0 chr2 208111075 208111120 -45145463 + MIR SINE MIR 110 154 -108 879 210 11 0 chr2 208111806 208111982 -45144601 - MER5B DNA MER1_type 0 178 1 377 241 78 43 chr2 208112943 208113084 -45143499 + L2 LINE L2 3167 3312 -1 1675 156 25 44 chr2 208113233 208113548 -45143035 - AluJo SINE Alu -3 309 1 252 239 45 45 chr2 208113735 208113823 -45142760 + MER5B DNA MER1_type 2 89 -89 2862 80 3 0 chr2 208113905 208114282 -45142301 - L1PA12 LINE L1 0 6168 5791 316 298 8 97 chr2 208115330 208115454 -45141129 - L2 LINE L2 0 3272 3160 920 218 44 19 chr2 208115478 208115684 -45140899 - MIR SINE MIR -32 230 20 322 256 34 8 chr2 208115714 208115831 -45140752 + L1MA5 LINE L1 5956 6075 -225 * 1119 121 3 141 chr2 208115824 208116114 -45140469 + L1MB8 LINE L1 5929 6178 0 338 346 113 17 chr2 208116314 208116669 -45139914 - L2 LINE L2 -339 2975 2587 371 312 64 0 chr2 208117121 208117262 -45139321 + MIR SINE MIR 71 220 -42 317 280 80 10 chr2 208117340 208117440 -45139143 - L2 LINE L2 -3 3269 3163 324 302 27 27 chr2 208117530 208117679 -45138904 + MLT1L LTR MaLR 135 283 -332 2295 95 3 10 chr2 208117739 208118044 -45138539 + AluSq SINE Alu 1 303 -10 227 276 32 70 chr2 208118076 208118232 -45138351 + MLT1J LTR MaLR 268 417 -94 232 278 153 9 chr2 208119289 208119405 -45137178 - MIR SINE MIR -63 145 25 256 314 86 80 chr2 208120283 208120458 -45136125 + MER5A DNA MER1_type 13 188 -1 404 253 0 0 chr2 208121282 208121365 -45135218 - L2 LINE L2 -6 3307 3225 185 247 39 65 chr2 208121462 208121539 -45135044 - MIR SINE MIR -54 208 134 518 219 228 19 chr2 208121585 208121800 -45134783 - MIR SINE MIR 0 262 3 229 288 110 0 chr2 208121800 208121873 -45134710 - MIR SINE MIR -147 115 35 28 0 0 0 chr2 208122090 208122118 -45134465 + AT_rich Low_complexity Low_complexity 1 28 0 285 29 0 0 chr2 208123691 208123725 -45132858 + (CA)n Simple_repeat Simple_repeat 1 34 0 * 333 0 0 0 chr2 208123724 208123761 -45132822 + (GA)n Simple_repeat Simple_repeat 2 38 0 4189 116 18 21 chr2 208124418 208125099 -45131484 - HSMAR2 DNA Mariner -1 1301 623 237 186 0 0 chr2 208125100 208125143 -45131440 + Alu SINE Alu 133 175 -128 28 0 0 0 chr2 208125169 208125197 -45131386 + AT_rich Low_complexity Low_complexity 1 28 0 3911 128 11 3 chr2 208125197 208125832 -45130751 - HSMAR2 DNA Mariner -661 641 2 202 300 12 0 chr2 208126068 208126148 -45130435 + (TA)n Simple_repeat Simple_repeat 2 82 0 262 229 129 0 chr2 208126148 208126218 -45130365 - MIR SINE MIR -74 188 110 195 42 0 0 chr2 208126555 208126579 -45130004 + (A)n Simple_repeat Simple_repeat 1 24 0 309 320 31 0 chr2 208126640 208126737 -45129846 + L2 LINE L2 3199 3298 -15 1061 172 29 0 chr2 208127917 208128091 -45128492 - MER5A DNA MER1_type -4 185 7 1381 203 50 95 chr2 208128162 208128645 -45127938 + MLT1D LTR MaLR 22 482 -23 207 0 0 0 chr2 208128718 208128741 -45127842 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 386 289 61 0 chr2 208128850 208128964 -45127619 + MIR3 SINE MIR 82 202 -6 188 310 221 9 chr2 208129688 208129801 -45126782 + L3b LINE CR1 1116 1252 -331 472 282 32 43 chr2 208129805 208129993 -45126590 - MER5A DNA MER1_type 0 189 4 242 222 77 103 chr2 208130035 208130152 -45126431 + L3b LINE CR1 1290 1403 -180 846 184 38 32 chr2 208130257 208130442 -45126141 + MER5A DNA MER1_type 4 189 0 251 374 0 0 chr2 208130518 208130601 -45125982 + MIR SINE MIR 53 135 -127 322 286 0 0 chr2 208130762 208130839 -45125744 - L2 LINE L2 0 3313 3237 280 316 74 0 chr2 208130973 208131068 -45125515 + L2 LINE L2 3188 3289 -24 246 254 0 30 chr2 208133344 208133411 -45123172 + MIR SINE MIR 198 262 0 2580 43 10 3 chr2 208133541 208133842 -45122741 - AluY SINE Alu -8 303 1 21 57 0 0 chr2 208134291 208134326 -45122257 + AT_rich Low_complexity Low_complexity 1 35 0 382 343 98 29 chr2 208134444 208134758 -45121825 - L3b LINE CR1 -143 1440 1105 312 268 0 49 chr2 208134758 208134840 -45121743 + MER5A DNA MER1_type 4 81 -108 2214 128 0 3 chr2 208136285 208136590 -45119993 - AluSx SINE Alu -8 304 1 21 0 0 0 chr2 208136598 208136619 -45119964 + AT_rich Low_complexity Low_complexity 1 21 0 329 333 33 92 chr2 208137297 208137603 -45118980 + L3 LINE CR1 202 489 -1088 424 323 36 0 chr2 208137932 208138124 -45118459 + LTR16A LTR ERVL 250 448 -2 1594 313 54 24 chr2 208138126 208138962 -45117621 + HERV16 LTR ERVL 1 861 -4135 661 334 48 6 chr2 208139248 208139562 -45117021 + HERV16 LTR ERVL 1251 1577 -3419 472 142 9 9 chr2 208139598 208139711 -45116872 + L1M4 LINE L1 2845 2957 -3189 * 773 206 40 36 chr2 208139694 208139941 -45116642 + L1ME1 LINE L1 5787 6034 -132 214 97 32 65 chr2 208139947 208140009 -45116574 + (TTTA)n Simple_repeat Simple_repeat 4 63 0 455 224 0 0 chr2 208140028 208140135 -45116448 + L1MA10 LINE L1 6225 6331 -3 1127 346 31 17 chr2 208140140 208140723 -45115860 - ERVL LTR ERVL -1117 4647 4057 464 273 131 49 chr2 208140743 208141132 -45115451 - ERVL LTR ERVL -1339 3657 3237 2645 255 64 15 chr2 208141177 208142180 -45114403 - L1MEc LINE L1 -4130 2266 1215 3008 170 213 38 chr2 208142206 208143066 -45113517 + MER52C LTR ERV1 269 1278 0 497 203 53 0 chr2 208143105 208143238 -45113345 - L1MEc LINE L1 -5243 1153 1014 2447 270 46 8 chr2 208143310 208144111 -45112472 - L1MEc LINE L1 -5511 885 54 884 271 47 0 chr2 208144620 208144856 -45111727 - L2 LINE L2 -785 2529 2283 327 336 28 19 chr2 208145452 208145559 -45111024 + MIR3 SINE MIR 88 195 -13 23 0 0 0 chr2 208146034 208146057 -45110526 + AT_rich Low_complexity Low_complexity 1 23 0 22 70 0 0 chr2 208146801 208146844 -45109739 + AT_rich Low_complexity Low_complexity 1 43 0 832 281 85 40 chr2 208147922 208148391 -45108192 + LTR16C LTR ERVL 2 491 0 259 322 45 40 chr2 208148391 208148568 -45108015 + HERV16 LTR ERVL 1 178 -4818 1936 169 11 32 chr2 208148673 208149046 -45107537 + MLT1A1 LTR MaLR 1 365 0 735 335 74 27 chr2 208149355 208149839 -45106744 + HERV16 LTR ERVL 2182 2688 -3076 698 316 38 38 chr2 208149860 208150158 -45106425 + HERV16 LTR ERVL 3776 4073 -1691 2470 132 6 3 chr2 208150158 208150521 -45106062 + THE1B LTR MaLR 1 364 0 698 316 38 38 chr2 208150521 208150617 -45105966 + HERV16 LTR ERVL 4073 4173 -1591 923 33 0 8 chr2 208150617 208150737 -45105846 + (AATAG)n Simple_repeat Simple_repeat 1 119 0 698 316 38 38 chr2 208150737 208150816 -45105767 + HERV16 LTR ERVL 4172 4250 -1514 572 373 55 25 chr2 208150936 208151531 -45105052 + HERV16 LTR ERVL 4511 5123 -641 327 291 63 82 chr2 208151891 208152159 -45104424 + LTR16C LTR ERVL 1 263 -228 948 182 0 0 chr2 208152161 208152337 -45104246 - MER105 DNA DNA 0 204 29 299 290 0 9 chr2 208152683 208152790 -45103793 + LTR16C LTR ERVL 363 468 -23 243 187 0 55 chr2 208154209 208154300 -45102283 + CT-rich Low_complexity Low_complexity 1 86 0 351 290 84 15 chr2 208154760 208154891 -45101692 + L2 LINE L2 3168 3307 -6 860 263 37 5 chr2 208155051 208155268 -45101315 + MIR SINE MIR 18 241 -21 20461 152 16 14 chr2 208155424 208160270 -45096313 + L1P3 LINE L1 2 4976 -1485 453 290 0 37 chr2 208161080 208161187 -45095396 + MIR SINE MIR 30 132 -76 194 347 14 0 chr2 208161273 208161345 -45095238 - MIR SINE MIR -5 257 185 200 262 0 66 chr2 208161388 208161449 -45095134 - MIR SINE MIR -155 107 51 1665 266 127 17 chr2 208162903 208163292 -45093291 + L1ME3A LINE L1 5296 5641 -529 361 33 333 0 chr2 208163292 208163352 -45093231 + MADE1 DNA Mariner 1 80 0 1665 266 127 17 chr2 208163352 208163717 -45092866 + L1ME3A LINE L1 5641 6133 -37 46 45 0 0 chr2 208163718 208163785 -45092798 + AT_rich Low_complexity Low_complexity 1 67 0 275 203 101 43 chr2 208163893 208163962 -45092621 - MER5A DNA MER1_type -116 73 1 595 306 193 23 chr2 208163967 208164820 -45091763 + L2 LINE L2 1786 2783 -531 441 249 115 61 chr2 208164873 208165038 -45091545 - MER5A DNA MER1_type -6 183 10 216 395 16 16 chr2 208165047 208165180 -45091403 + L2 LINE L2 2853 2985 -287 300 346 52 22 chr2 208166925 208167061 -45089522 + L2 LINE L2 3102 3241 -31 324 0 0 0 chr2 208168228 208168264 -45088319 + (CA)n Simple_repeat Simple_repeat 1 36 0 244 319 14 0 chr2 208168615 208168687 -45087896 - L2 LINE L2 0 3272 3200 2279 122 33 25 chr2 208169001 208169362 -45087221 + THE1B LTR MaLR 1 364 0 186 340 58 19 chr2 208169493 208169596 -45086987 - L2 LINE L2 -929 2385 2279 1897 255 102 60 chr2 208170127 208172038 -45084545 + L1MCc LINE L1 102 2078 -4863 490 271 85 0 chr2 208172037 208172225 -45084358 - L1M4 LINE L1 -2503 3643 3440 * 782 139 165 0 chr2 208172262 208172420 -45084163 + L1PB1 LINE L1 5968 6151 0 497 234 80 18 chr2 208172451 208172677 -45083906 - L1M4 LINE L1 -2722 3424 3185 360 356 59 39 chr2 208172828 208173185 -45083398 - L2 LINE L2 -411 2903 2540 273 253 13 40 chr2 208173237 208173385 -45083198 - MIR SINE MIR -2 260 19 183 355 92 14 chr2 208173395 208173536 -45083047 - L2 LINE L2 -819 2495 2344 6432 126 58 25 chr2 208173687 208174000 -45082583 + Tigger3b DNA MER2_type 3 304 -2724 3717 94 43 5 chr2 208174000 208174575 -45082008 + L1PB2 LINE L1 5553 6149 -2 6432 126 58 25 chr2 208174575 208174791 -45081792 + Tigger3b DNA MER2_type 304 511 -2517 309 51 0 0 chr2 208174791 208174830 -45081753 + (TG)n Simple_repeat Simple_repeat 2 40 0 6432 126 58 25 chr2 208174830 208175479 -45081104 + Tigger3b DNA MER2_type 511 1221 -10 367 256 43 17 chr2 208175593 208175710 -45080873 + L1ME LINE L1 198 317 -5888 245 274 140 57 chr2 208176240 208176876 -45079707 + L1ME LINE L1 695 1383 -5013 * 268 255 131 42 chr2 208176870 208177129 -45079454 + L1ME LINE L1 3298 3579 -2636 279 267 8 8 chr2 208177240 208177371 -45079212 + (TA)n Simple_repeat Simple_repeat 2 132 0 236 135 39 45 chr2 208177396 208177552 -45079031 + (TA)n Simple_repeat Simple_repeat 2 156 0 3764 243 38 15 chr2 208177647 208179001 -45077582 + L1ME LINE L1 3867 5292 -923 353 246 144 8 chr2 208179139 208179257 -45077326 + L1M LINE L1 5324 5457 -774 3725 123 5 50 chr2 208179366 208180364 -45076219 - L1P4 LINE L1 -529 5639 4667 1720 181 137 0 chr2 208180364 208180678 -45075905 - LTR18A LTR ERVL 0 357 1 33362 168 9 10 chr2 208180679 208186660 -45069923 - HERVL18 LTR ERVL 0 6047 1 2006 176 57 0 chr2 208186666 208187001 -45069582 - LTR18A LTR ERVL 0 357 4 11797 163 14 12 chr2 208187001 208187407 -45069176 - L1P4 LINE L1 -1486 4660 4256 1827 177 0 32 chr2 208187407 208187718 -45068865 + AluSx SINE Alu 1 301 -11 11797 163 14 12 chr2 208187718 208189608 -45066975 - L1P4 LINE L1 -1890 4256 2360 187 279 0 144 chr2 208189644 208189755 -45066828 + MIR SINE MIR 48 142 -66 9129 228 41 19 chr2 208189766 208193746 -45062837 - L1MC2 LINE L1 -1 6761 2549 244 240 0 0 chr2 208193748 208193798 -45062785 + Tigger3(Golem) DNA MER2_type 33 82 -2947 * 1316 180 69 3 chr2 208193796 208193878 -45062705 + Tigger3(Golem) DNA MER2_type 2722 2797 -232 830 122 0 23 chr2 208193878 208194009 -45062574 - L1PA8 LINE L1 -9 6163 6036 1316 180 69 3 chr2 208194009 208194215 -45062368 + Tigger3(Golem) DNA MER2_type 2797 3029 0 2298 113 53 0 chr2 208194223 208194560 -45062023 + THE1A LTR MaLR 1 355 0 2866 229 82 13 chr2 208194564 208195191 -45061392 - L1MC2 LINE L1 -4022 2542 1960 185 83 28 0 chr2 208195191 208195227 -45061356 + (TTG)n Simple_repeat Simple_repeat 1 37 0 2866 229 82 13 chr2 208195227 208196189 -45060394 - L1MC2 LINE L1 -4604 1960 744 * 36754 79 11 7 chr2 208196184 208202302 -45054281 - L1PA6 LINE L1 -1 6153 11 1813 271 20 52 chr2 208202307 208202959 -45053624 - L1MC2 LINE L1 -5283 762 132 365 290 0 16 chr2 208203050 208203174 -45053409 - L1MC2 LINE L1 -6269 295 174 196 354 24 0 chr2 208203193 208203275 -45053308 + MIR SINE MIR 164 247 -15 512 219 124 24 chr2 208203283 208203452 -45053131 - MIR SINE MIR -35 227 42 711 75 0 19 chr2 208203821 208203927 -45052656 + LTR7 LTR ERV1 345 448 -2 19173 95 15 13 chr2 208203929 208206909 -45049674 + HERVH LTR ERV1 1 2987 -4726 795 169 20 0 chr2 208206903 208207051 -45049532 + HERVH LTR ERV1 3140 3290 -4423 * 3184 111 0 4 chr2 208207050 208207546 -45049037 + HERVH LTR ERV1 3500 3993 -3720 4027 149 1 1 chr2 208207548 208208210 -45048373 + HERVH LTR ERV1 4488 5149 -2564 1180 142 32 27 chr2 208208211 208208430 -45048153 + HERVH LTR ERV1 5600 5819 -1894 2305 85 45 16 chr2 208208432 208208809 -45047774 + HERVH LTR ERV1 7326 7713 0 2878 72 0 7 chr2 208208809 208209224 -45047359 + LTR7 LTR ERV1 1 412 -38 207 0 0 0 chr2 208209273 208209296 -45047287 + (CA)n Simple_repeat Simple_repeat 1 23 0 588 213 125 0 chr2 208210041 208210177 -45046406 + MER63 DNA MER1_type 1 779 -283 566 197 49 0 chr2 208210175 208210297 -45046286 + MER63 DNA MER1_type 929 1056 -5 * 2292 64 0 3 chr2 208210443 208210750 -45045833 + AluY SINE Alu 1 306 0 449 256 160 0 chr2 208210889 208211045 -45045538 - MIR SINE MIR 0 262 82 466 270 44 13 chr2 208211872 208212031 -45044552 + LTR33 LTR ERVL 1 164 -357 289 271 169 0 chr2 208212113 208212279 -45044304 + LTR33 LTR ERVL 328 521 0 336 173 62 0 chr2 208212795 208212876 -45043707 + MER53 DNA DNA 93 178 -11 271 179 71 0 chr2 208212812 208212879 -45043704 - MER53 DNA DNA -99 90 14 * 180 0 0 0 chr2 208212879 208212899 -45043684 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 271 179 71 0 chr2 208212899 208212915 -45043668 - MER53 DNA DNA -175 14 1 372 232 12 0 chr2 208212918 208213000 -45043583 - MER3 DNA MER1_type -126 83 1 784 206 0 35 chr2 208215576 208215746 -45040837 - AluJo SINE Alu -2 300 137 234 0 0 0 chr2 208216810 208216836 -45039747 + (CA)n Simple_repeat Simple_repeat 1 26 0 954 285 152 17 chr2 208217017 208217497 -45039086 + LTR67 LTR ERVL 7 551 -6 632 302 22 58 chr2 208217604 208217829 -45038754 - L3 LINE CR1 -410 1167 951 248 256 22 131 chr2 208217811 208217948 -45038635 + L3 LINE CR1 882 1003 -574 * 404 329 134 0 chr2 208217956 208218120 -45038463 + L3 LINE CR1 1392 1577 0 1157 231 221 17 chr2 208218391 208218983 -45037600 - L2 LINE L2 -98 3215 2508 4641 57 20 6 chr2 208218983 208220098 -45036485 + MER11A LTR ERVK 1 1266 0 850 269 138 14 chr2 208220098 208220533 -45036050 - L2 LINE L2 -801 2513 2025 227 358 0 11 chr2 208220636 208220731 -45035852 + GA-rich Low_complexity Low_complexity 2 95 0 831 130 0 23 chr2 208220984 208221115 -45035468 - AluJo SINE Alu -172 130 3 398 296 96 0 chr2 208222604 208222739 -45033844 - MIR SINE MIR -87 175 28 250 206 37 103 chr2 208223794 208223901 -45032682 + MLT1J1 LTR MaLR 1 100 -346 1321 133 37 141 chr2 208223933 208224287 -45032296 - MER2 DNA MER2_type -28 317 1 228 392 58 17 chr2 208224694 208224814 -45031769 + L2 LINE L2 3137 3261 -11 207 146 0 0 chr2 208228334 208228375 -45028208 + (TA)n Simple_repeat Simple_repeat 1 41 0 205 76 13 114 chr2 208228631 208228710 -45027873 + (CAAAAA)n Simple_repeat Simple_repeat 2 72 0 600 270 108 4 chr2 208229574 208229783 -45026800 + MIR SINE MIR 3 225 -37 522 203 222 0 chr2 208229791 208229954 -45026629 - MER58B DNA MER1_type 0 341 9 366 280 47 0 chr2 208231944 208232051 -45024532 - MIR SINE MIR 0 262 151 189 0 0 0 chr2 208232923 208232944 -45023639 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 21 36 0 0 chr2 208233107 208233135 -45023448 + AT_rich Low_complexity Low_complexity 1 28 0 1128 231 88 72 chr2 208233415 208233901 -45022682 + L1ME3 LINE L1 5655 6148 -14 559 297 51 62 chr2 208234291 208234547 -45022036 - MIR SINE MIR -8 254 2 478 325 127 4 chr2 208234613 208234865 -45021718 - L2 LINE L2 -159 3154 2872 759 211 72 5 chr2 208234865 208235059 -45021524 - MER3 DNA MER1_type 0 209 3 1398 107 0 0 chr2 208236425 208236603 -45019980 + AluSx SINE Alu 1 178 -134 6603 58 10 0 chr2 208236603 208237475 -45019108 + MER11B LTR ERVK 1 881 -355 587 101 0 0 chr2 208237575 208237654 -45018929 + AluSg/x SINE Alu 216 294 -18 270 81 0 0 chr2 208237657 208237694 -45018889 + (TG)n Simple_repeat Simple_repeat 2 38 0 2499 81 0 0 chr2 208238282 208238589 -45017994 - AluY SINE Alu -4 307 1 349 254 101 74 chr2 208238892 208239081 -45017502 + MIR SINE MIR 67 260 -2 2305 85 0 23 chr2 208239491 208239796 -45016787 - AluY SINE Alu -13 298 1 670 226 66 0 chr2 208239824 208240005 -45016578 - Charlie1a DNA MER1_type -1204 251 59 4389 179 87 30 chr2 208242050 208243066 -45013517 + Charlie1a DNA MER1_type 220 1312 -1449 1928 179 9 3 chr2 208243066 208243407 -45013176 - MER2 DNA MER2_type -1 343 1 4389 179 87 30 chr2 208243407 208243555 -45013028 + Charlie1a DNA MER1_type 1312 1450 -5 186 209 0 0 chr2 208244071 208244114 -45012469 + GA-rich Low_complexity Low_complexity 2 44 0 25 0 0 0 chr2 208244225 208244250 -45012333 + AT_rich Low_complexity Low_complexity 1 25 0 354 383 9 9 chr2 208246656 208246878 -45009705 + L2 LINE L2 2422 2643 -671 330 347 35 55 chr2 208247127 208247326 -45009257 + L2 LINE L2 3039 3233 -39 2216 113 7 0 chr2 208248552 208248862 -45007721 + AluSx SINE Alu 1 312 0 27 0 0 0 chr2 208250425 208250452 -45006131 + AT_rich Low_complexity Low_complexity 1 27 0 606 261 39 30 chr2 208252300 208252503 -45004080 + MER63A DNA MER1_type 1 205 -5 1885 154 0 28 chr2 208253332 208253651 -45002932 + AluJb SINE Alu 3 312 0 205 290 194 11 chr2 208253652 208253745 -45002838 - MIR SINE MIR -78 130 21 23 0 0 0 chr2 208254043 208254066 -45002517 + AT_rich Low_complexity Low_complexity 1 23 0 206 331 19 64 chr2 208255137 208255294 -45001289 - MIR3 SINE MIR -57 151 2 337 316 32 0 chr2 208256548 208256643 -44999940 + L2 LINE L2 3216 3313 0 285 75 0 0 chr2 208257083 208257123 -44999460 + (GGGA)n Simple_repeat Simple_repeat 2 41 0 290 287 156 30 chr2 208260199 208260366 -44996217 + MIR SINE MIR 19 206 -56 230 231 0 31 chr2 208260414 208260479 -44996104 + GA-rich Low_complexity Low_complexity 2 64 0 1028 180 36 5 chr2 208260589 208260783 -44995800 - MER20 DNA MER1_type -19 200 1 235 248 139 36 chr2 208261138 208261275 -44995308 + MIR SINE MIR 14 164 -98 821 218 30 5 chr2 208261505 208261707 -44994876 - MER106A DNA MER1_type -1 235 29 36 0 0 0 chr2 208262070 208262106 -44994477 + AT_rich Low_complexity Low_complexity 1 36 0 274 196 49 69 chr2 208262352 208262397 -44994186 - Charlie8 DNA MER1_type -204 137 93 1167 99 35 0 chr2 208262397 208262569 -44994014 + L1PA13 LINE L1 5981 6158 -5 274 196 49 69 chr2 208262569 208262625 -44993958 - Charlie8 DNA MER1_type -248 93 38 357 125 0 0 chr2 208265608 208265664 -44990919 + (CA)n Simple_repeat Simple_repeat 1 56 0 428 312 51 27 chr2 208269673 208269841 -44986742 + MIR3 SINE MIR 23 198 -10 1708 210 34 63 chr2 208269914 208270471 -44986112 + L1MD3 LINE L1 7450 7990 -5 382 344 128 53 chr2 208271044 208271474 -44985109 + L2 LINE L2 2806 3267 -5 24 32 0 0 chr2 208272469 208272500 -44984083 + AT_rich Low_complexity Low_complexity 1 31 0 201 211 0 0 chr2 208273957 208274009 -44982574 + (CATA)n Simple_repeat Simple_repeat 3 54 0 292 197 0 15 chr2 208274390 208274456 -44982127 + MER96 DNA MER1_type? 111 175 0 23 0 0 0 chr2 208276002 208276025 -44980558 + AT_rich Low_complexity Low_complexity 1 23 0 436 239 6 17 chr2 208277531 208277711 -44978872 + (TA)n Simple_repeat Simple_repeat 2 179 0 228 234 0 0 chr2 208277763 208277827 -44978756 - L1MC4 LINE L1 -1339 6703 6640 198 208 0 0 chr2 208277831 208277879 -44978704 + (CA)n Simple_repeat Simple_repeat 2 49 0 22 0 0 0 chr2 208279039 208279061 -44977522 + AT_rich Low_complexity Low_complexity 1 22 0 303 28 0 0 chr2 208279751 208279787 -44976796 + (CA)n Simple_repeat Simple_repeat 1 36 0 641 309 48 8 chr2 208281462 208281711 -44974872 - MIR SINE MIR 0 262 4 470 247 165 6 chr2 208282000 208282158 -44974425 + MIR SINE MIR 79 261 -1 2145 126 0 3 chr2 208283504 208283805 -44972778 + AluSx SINE Alu 1 300 -12 2089 134 0 0 chr2 208284605 208284940 -44971643 + AluSx SINE Alu 1 312 0 23 0 0 0 chr2 208290593 208290616 -44965967 + AT_rich Low_complexity Low_complexity 1 23 0 213 318 0 0 chr2 208290786 208290849 -44965734 - L3 LINE CR1 -2 1575 1513 440 305 241 10 chr2 208293128 208293331 -44963252 + MIR SINE MIR 13 262 0 2173 130 0 16 chr2 208294404 208294719 -44961864 + AluSx SINE Alu 1 310 -2 2025 144 6 6 chr2 208294958 208295270 -44961313 + AluSx SINE Alu 1 312 0 371 245 139 20 chr2 208298137 208298288 -44958295 - LTR16A1 LTR ERVL -24 433 265 27 0 0 0 chr2 208299023 208299050 -44957533 + AT_rich Low_complexity Low_complexity 1 27 0 23 0 0 0 chr2 208299157 208299180 -44957403 + AT_rich Low_complexity Low_complexity 1 23 0 249 33 0 0 chr2 208299436 208299466 -44957117 + (CA)n Simple_repeat Simple_repeat 2 31 0 230 0 33 0 chr2 208300565 208300595 -44955988 + (CA)n Simple_repeat Simple_repeat 2 32 0 255 302 134 58 chr2 208301073 208301604 -44954979 + L2 LINE L2 1717 2341 -973 1200 27 60 0 chr2 208301604 208301754 -44954829 - L1PA5 LINE L1 0 6154 5996 255 302 134 58 chr2 208301754 208302096 -44954487 + L2 LINE L2 2341 2656 -658 2487 84 0 0 chr2 208302461 208302769 -44953814 - AluSc SINE Alu 0 309 2 2175 115 6 29 chr2 208303181 208303494 -44953089 - AluSx SINE Alu -6 306 1 193 338 84 0 chr2 208304081 208304152 -44952431 + L2 LINE L2 3119 3195 -77 997 180 22 0 chr2 208304174 208304357 -44952226 + MER5A DNA MER1_type 2 188 -1 40 59 0 0 chr2 208304540 208304608 -44951975 + AT_rich Low_complexity Low_complexity 1 68 0 22 0 0 0 chr2 208306661 208306683 -44949900 + AT_rich Low_complexity Low_complexity 1 22 0 803 81 0 0 chr2 208307063 208307162 -44949421 + AluS SINE Alu 1 99 -213 1522 119 37 30 chr2 208307268 208307563 -44949020 + AluSx SINE Alu 11 307 -5 1862 124 0 4 chr2 208307671 208307930 -44948653 - AluSq SINE Alu -13 300 43 2000 108 7 17 chr2 208308396 208308683 -44947900 - AluSx SINE Alu -28 284 1 517 293 103 57 chr2 208309141 208309441 -44947142 - Charlie8 DNA MER1_type -1006 1411 11 2222 124 0 0 chr2 208309665 208309964 -44946619 - AluSx SINE Alu -13 299 1 277 205 8 41 chr2 208310137 208310259 -44946324 + CT-rich Low_complexity Low_complexity 2 119 0 2078 121 7 0 chr2 208310585 208310889 -44945694 + AluSx SINE Alu 1 306 0 290 192 0 14 chr2 208311704 208311777 -44944806 + (TA)n Simple_repeat Simple_repeat 1 72 0 225 238 95 0 chr2 208311790 208311874 -44944709 + L1MC4 LINE L1 6614 6705 -1337 252 86 0 0 chr2 208313129 208313164 -44943419 + (A)n Simple_repeat Simple_repeat 1 35 0 23 54 0 0 chr2 208313665 208313702 -44942881 + AT_rich Low_complexity Low_complexity 1 37 0 313 304 0 0 chr2 208314262 208314341 -44942242 - L2 LINE L2 -4 3268 3190 22 56 0 0 chr2 208314549 208314585 -44941998 + AT_rich Low_complexity Low_complexity 1 36 0 383 167 14 0 chr2 208314835 208314907 -44941676 + MER116 DNA Mariner 6 78 -2 23 0 0 0 chr2 208315273 208315296 -44941287 + AT_rich Low_complexity Low_complexity 1 23 0 185 330 85 57 chr2 208316466 208316572 -44940011 - L2 LINE L2 -3 3269 3161 1913 102 78 7 chr2 208318607 208318890 -44937693 - AluSg SINE Alu -7 303 1 224 365 24 101 chr2 208319032 208319457 -44937126 + L2 LINE L2 2872 3263 -9 190 235 25 86 chr2 208319508 208319589 -44936994 + L2 LINE L2 3191 3266 -6 2018 191 45 13 chr2 208320181 208320630 -44935953 + L1MA7 LINE L1 5826 6288 -3 183 42 0 0 chr2 208323486 208323510 -44933073 + (CA)n Simple_repeat Simple_repeat 2 25 0 273 29 0 0 chr2 208323757 208323791 -44932792 + (CA)n Simple_repeat Simple_repeat 1 34 0 672 253 21 16 chr2 208325353 208325539 -44931044 - MIR SINE MIR -63 199 13 239 244 0 0 chr2 208327543 208327588 -44928995 + L2 LINE L2 3150 3194 -78 189 0 0 0 chr2 208328285 208328306 -44928277 + (A)n Simple_repeat Simple_repeat 1 21 0 312 197 0 0 chr2 208328816 208328890 -44927693 + HsTC2 DNA Tc2 31 1895 -3 1529 197 13 0 chr2 208331624 208331929 -44924654 + L1MB4 LINE L1 5870 6178 -2 2015 152 0 0 chr2 208332020 208332322 -44924261 + AluSx SINE Alu 1 302 -10 186 314 116 12 chr2 208332766 208332852 -44923731 - L3 LINE CR1 -519 1058 964 223 324 0 0 chr2 208333163 208333234 -44923349 + L2 LINE L2 3234 3304 -9 813 145 91 59 chr2 208333746 208333932 -44922651 + MER20 DNA MER1_type 4 195 -24 246 332 105 80 chr2 208333970 208334256 -44922327 - L2 LINE L2 -48 3224 2932 1881 133 3 18 chr2 208334433 208334747 -44921836 + AluSc SINE Alu 1 310 0 466 297 17 53 chr2 208335317 208335517 -44921066 - MIR3 SINE MIR -63 145 6 338 320 153 22 chr2 208336052 208336274 -44920309 - MIR SINE MIR 0 262 12 389 235 72 52 chr2 208336853 208337006 -44919577 + MIR SINE MIR 58 213 -49 943 85 0 57 chr2 208337025 208337166 -44919417 - FLAM_C SINE Alu 0 133 1 1881 149 0 27 chr2 208337221 208337522 -44919061 - AluJb SINE Alu -17 295 3 243 0 0 0 chr2 208338532 208338559 -44918024 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 450 179 12 2 chr2 208341051 208341147 -44915436 - L1ME3 LINE L1 -305 5859 5777 859 187 170 8 chr2 208341151 208341386 -44915197 + L1ME3 LINE L1 5884 6156 -6 763 293 11 5 chr2 208341967 208342155 -44914428 + MIR SINE MIR 2 190 -72 1761 154 3 14 chr2 208342468 208342778 -44913805 - AluJb SINE Alu 0 307 1 230 286 86 67 chr2 208342902 208343007 -44913576 - MIR3 SINE MIR -44 164 58 664 289 82 13 chr2 208343126 208343358 -44913225 + MIR SINE MIR 1 248 -14 1393 174 0 8 chr2 208343440 208343676 -44912907 - MER46A DNA MER2_type 0 236 3 462 35 17 0 chr2 208344052 208344110 -44912473 + (CA)n Simple_repeat Simple_repeat 1 59 0 411 280 170 47 chr2 208344396 208344822 -44911761 + L1M2 LINE L1 841 1326 -5523 477 0 0 0 chr2 208344822 208344875 -44911708 + (CA)n Simple_repeat Simple_repeat 1 53 0 411 280 170 47 chr2 208344875 208344895 -44911688 + L1M2 LINE L1 1326 1342 -5507 187 279 121 107 chr2 208345222 208345362 -44911221 - MIR3 SINE MIR -65 143 2 197 360 132 9 chr2 208346306 208346420 -44910163 - L2 LINE L2 -3 3269 3142 30 0 0 0 chr2 208347880 208347910 -44908673 + AT_rich Low_complexity Low_complexity 1 30 0 2255 71 40 0 chr2 208349272 208349568 -44907015 + AluY SINE Alu 1 308 -3 323 331 15 23 chr2 208350717 208350850 -44905733 + MIR3 SINE MIR 23 154 -54 199 200 46 77 chr2 208351286 208351351 -44905232 + L2 LINE L2 3185 3247 -25 213 226 0 19 chr2 208351356 208351409 -44905174 + GA-rich Low_complexity Low_complexity 3 54 0 219 162 0 0 chr2 208351662 208351699 -44904884 + MIR3 SINE MIR 158 194 -14 21 0 0 0 chr2 208352348 208352369 -44904214 + AT_rich Low_complexity Low_complexity 1 21 0 1125 140 0 42 chr2 208352614 208352807 -44903776 + AluJo SINE Alu 1 185 -127 204 40 0 0 chr2 208352828 208352853 -44903730 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 306 49 0 0 chr2 208353187 208353228 -44903355 - AluSc SINE Alu -4 295 255 185 263 0 0 chr2 208353644 208353682 -44902901 + L2 LINE L2 3256 3293 -20 21 0 0 0 chr2 208353941 208353962 -44902621 + AT_rich Low_complexity Low_complexity 1 21 0 1583 164 80 0 chr2 208355710 208355997 -44900586 + AluSx SINE Alu 1 310 -2 371 134 37 61 chr2 208356436 208356518 -44900065 + MER34 LTR ERV1 11 90 -452 * 451 189 8 83 chr2 208356511 208356643 -44899940 + MER34C LTR ERV1 464 585 0 316 276 38 19 chr2 208356669 208356774 -44899809 + MIR SINE MIR 92 198 -64 1743 179 0 3 chr2 208357092 208357382 -44899201 + AluJb SINE Alu 1 289 -23 198 0 0 0 chr2 208357385 208357407 -44899176 + (TTTAA)n Simple_repeat Simple_repeat 1 22 0 330 244 131 38 chr2 208357584 208357612 -44898971 - MIR SINE MIR -75 187 163 2172 145 64 10 chr2 208357612 208358018 -44898565 - MSTA LTR MaLR 0 428 1 330 244 131 38 chr2 208358018 208358143 -44898440 - MIR SINE MIR -99 163 13 249 398 68 0 chr2 208358314 208358432 -44898151 + L2 LINE L2 3143 3268 -4 321 229 60 127 chr2 208358514 208358680 -44897903 - MIR SINE MIR -13 249 95 468 304 137 6 chr2 208358765 208358933 -44897650 - MIR SINE MIR -66 196 7 253 277 208 20 chr2 208359197 208359298 -44897285 - L2 LINE L2 -2 3270 3151 23 0 0 0 chr2 208359316 208359339 -44897244 + AT_rich Low_complexity Low_complexity 1 23 0 1997 99 46 26 chr2 208359369 208359673 -44896910 + AluSg SINE Alu 1 310 0 730 313 88 30 chr2 208359771 208360167 -44896416 - L2 LINE L2 -342 2972 2554 2382 73 0 3 chr2 208360208 208360497 -44896086 + AluSc SINE Alu 1 288 -21 1018 132 6 36 chr2 208360513 208360680 -44895903 + AluSg/x SINE Alu 135 296 -16 240 268 56 0 chr2 208360731 208360802 -44895781 + L1ME3A LINE L1 6006 6080 -90 250 276 138 9 chr2 208361202 208361412 -44895171 + L1ME LINE L1 5647 5883 -238 219 173 0 0 chr2 208361414 208361466 -44895117 + (TATTG)n Simple_repeat Simple_repeat 4 55 0 314 294 44 29 chr2 208363436 208363572 -44893011 - MER5A DNA MER1_type -2 187 50 22 35 0 0 chr2 208364065 208364094 -44892489 + AT_rich Low_complexity Low_complexity 1 29 0 1054 154 29 29 chr2 208364115 208364323 -44892260 - MER2 DNA MER2_type -136 209 2 281 243 24 160 chr2 208365061 208365142 -44891441 - MIR SINE MIR -64 198 150 1533 133 130 15 chr2 208365142 208365412 -44891171 + AluSg1 SINE Alu 1 301 -8 281 243 24 160 chr2 208365412 208365499 -44891084 - MIR SINE MIR -112 150 53 24 0 0 0 chr2 208365958 208365982 -44890601 + AT_rich Low_complexity Low_complexity 1 24 0 425 291 254 44 chr2 208366111 208366564 -44890019 + L3 LINE CR1 440 987 -590 534 67 53 0 chr2 208366643 208366718 -44889865 - MADE1 DNA Mariner -1 79 1 187 274 84 105 chr2 208366764 208366859 -44889724 + L3 LINE CR1 1197 1289 -288 226 381 0 0 chr2 208366947 208367044 -44889539 + L3 LINE CR1 1430 1526 -51 2448 80 3 3 chr2 208367260 208367573 -44889010 - AluSp SINE Alu 0 313 1 200 59 29 0 chr2 208367753 208367787 -44888796 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 22 35 0 0 chr2 208368993 208369022 -44887561 + AT_rich Low_complexity Low_complexity 1 29 0 188 200 0 100 chr2 208369535 208369595 -44886988 - L2 LINE L2 -3 3310 3257 * 626 284 79 22 chr2 208369563 208369792 -44886791 - MIR SINE MIR -19 243 2 196 53 53 0 chr2 208370828 208370866 -44885717 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 323 302 87 40 chr2 208371359 208371485 -44885098 - MIR SINE MIR -57 151 20 442 222 256 17 chr2 208371837 208372067 -44884516 + MLT1J LTR MaLR 224 508 -3 180 118 0 29 chr2 208372111 208372145 -44884438 + L2 LINE L2 2718 2750 -564 2260 90 3 7 chr2 208374858 208375139 -44881444 + AluY SINE Alu 1 282 -29 327 25 0 0 chr2 208375139 208375179 -44881404 + (CA)n Simple_repeat Simple_repeat 1 40 0 2260 90 3 7 chr2 208375179 208375196 -44881387 + AluY SINE Alu 282 298 -13 628 252 137 26 chr2 208376175 208376409 -44880174 - MIR SINE MIR 0 262 3 25 95 0 0 chr2 208376582 208376656 -44879927 + AT_rich Low_complexity Low_complexity 1 74 0 965 228 17 34 chr2 208378162 208378399 -44878184 + MIR SINE MIR 9 241 -21 27 100 0 0 chr2 208380319 208380409 -44876174 + AT_rich Low_complexity Low_complexity 1 90 0 813 201 19 0 chr2 208380704 208380863 -44875720 + MIR SINE MIR 91 252 -10 647 278 17 23 chr2 208381208 208381384 -44875199 + L2 LINE L2 3139 3313 0 230 262 0 0 chr2 208383888 208383949 -44872634 - L1MC4 LINE L1 -1342 6700 6640 225 222 0 32 chr2 208384227 208384290 -44872293 + GA-rich Low_complexity Low_complexity 2 62 0 2081 126 0 25 chr2 208384309 208384626 -44871957 - AluSx SINE Alu 0 312 4 366 123 0 0 chr2 208384725 208384782 -44871801 + (A)n Simple_repeat Simple_repeat 1 57 0 1923 133 0 33 chr2 208384910 208385210 -44871373 - AluSx SINE Alu -22 290 1 1022 240 37 39 chr2 208385352 208385760 -44870823 + L1MC5 LINE L1 7495 7901 -60 945 260 22 17 chr2 208386517 208386748 -44869835 + MIR SINE MIR 14 245 -17 1491 162 106 14 chr2 208386784 208387068 -44869515 + AluJo SINE Alu 3 312 0 227 260 130 10 chr2 208387322 208387422 -44869161 - L1ME4a LINE L1 -70 6051 5940 2263 90 0 0 chr2 208387660 208387950 -44868633 + AluSx SINE Alu 1 290 -22 26 0 0 0 chr2 208387976 208388002 -44868581 + AT_rich Low_complexity Low_complexity 1 26 0 26 30 0 0 chr2 208392463 208392496 -44864087 + AT_rich Low_complexity Low_complexity 1 33 0 2159 75 50 0 chr2 208393395 208393676 -44862907 - AluSq SINE Alu -18 295 1 303 306 9 37 chr2 208393695 208393803 -44862780 - L2 LINE L2 0 3272 3168 26 0 0 0 chr2 208394233 208394259 -44862324 + AT_rich Low_complexity Low_complexity 1 26 0 237 33 0 0 chr2 208394457 208394487 -44862096 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 204 40 0 0 chr2 208394872 208394897 -44861686 + (GA)n Simple_repeat Simple_repeat 2 26 0 213 299 15 0 chr2 208394929 208394996 -44861587 + GA-rich Low_complexity Low_complexity 2 69 0 441 305 40 13 chr2 208395595 208395746 -44860837 + MIR SINE MIR 51 205 -57 1139 181 118 10 chr2 208396020 208396308 -44860275 + MER33 DNA MER1_type 6 324 0 292 300 87 31 chr2 208396828 208396987 -44859596 - MIR SINE MIR -64 144 18 181 393 107 0 chr2 208397123 208397245 -44859338 - L2 LINE L2 -30 3242 3108 183 42 0 0 chr2 208397727 208397751 -44858832 + (TC)n Simple_repeat Simple_repeat 1 24 0 2108 101 0 7 chr2 208397854 208398141 -44858442 + AluSx SINE Alu 1 285 -27 23 33 0 0 chr2 208398484 208398514 -44858069 + AT_rich Low_complexity Low_complexity 1 30 0 2233 99 14 0 chr2 208398885 208399179 -44857404 - AluSp SINE Alu -15 298 1 21 36 0 0 chr2 208399277 208399305 -44857278 + AT_rich Low_complexity Low_complexity 1 28 0 30 93 0 0 chr2 208399405 208399491 -44857092 + AT_rich Low_complexity Low_complexity 1 86 0 188 154 0 51 chr2 208400124 208400163 -44856420 + MIR SINE MIR 221 257 -5 825 187 7 7 chr2 208400630 208400785 -44855798 + FRAM SINE Alu 1 155 -11 279 50 0 0 chr2 208401052 208401092 -44855491 - Alu SINE Alu -2 299 260 40 37 0 0 chr2 208402154 208402208 -44854375 + AT_rich Low_complexity Low_complexity 1 54 0 21 36 0 0 chr2 208406648 208406676 -44849907 + AT_rich Low_complexity Low_complexity 1 28 0 378 0 0 0 chr2 208409121 208409163 -44847420 + (CA)n Simple_repeat Simple_repeat 2 43 0 24 53 0 0 chr2 208410002 208410040 -44846543 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr2 208411847 208411868 -44844715 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 208413208 208413232 -44843351 + AT_rich Low_complexity Low_complexity 1 24 0 215 283 0 0 chr2 208414122 208414168 -44842415 + G-rich Low_complexity Low_complexity 4 49 0 180 111 0 0 chr2 208415842 208415869 -44840714 + (GGA)n Simple_repeat Simple_repeat 1 27 0 225 234 39 13 chr2 208416603 208416680 -44839903 + GA-rich Low_complexity Low_complexity 2 80 0 2353 80 0 6 chr2 208417634 208417945 -44838638 - AluSx SINE Alu -3 309 1 408 237 119 17 chr2 208418143 208418261 -44838322 + MLT1J LTR MaLR 64 193 -318 1867 125 0 0 chr2 208418285 208418564 -44838019 + AluSc SINE Alu 31 309 0 2002 83 3 68 chr2 208418666 208418992 -44837591 - AluSx SINE Alu -7 305 1 846 262 36 0 chr2 208419302 208419523 -44837060 - MIR SINE MIR 0 262 34 2233 85 0 13 chr2 208419532 208419838 -44836745 - AluY SINE Alu -7 304 3 1590 161 17 20 chr2 208419850 208420142 -44836441 - AluSx SINE Alu -21 291 1 2001 151 0 0 chr2 208420151 208420463 -44836120 - AluSx SINE Alu 0 312 1 326 323 8 39 chr2 208420503 208420633 -44835950 + MIR3 SINE MIR 77 202 -6 221 303 62 68 chr2 208421451 208421613 -44834970 + MIR SINE MIR 61 221 -41 1274 164 49 62 chr2 208422175 208422309 -44834274 - MER33 DNA MER1_type -2265 320 186 2587 42 0 0 chr2 208422309 208422618 -44833965 - AluY SINE Alu -2 309 1 1274 164 49 62 chr2 208422618 208422807 -44833776 - MER33 DNA MER1_type -2399 186 1 2075 98 7 26 chr2 208423079 208423384 -44833199 - AluSx SINE Alu -13 299 1 193 183 183 33 chr2 208423701 208423761 -44832822 - L3 LINE CR1 -1104 473 405 30 27 0 0 chr2 208424402 208424439 -44832144 + AT_rich Low_complexity Low_complexity 1 37 0 437 118 0 0 chr2 208425395 208425471 -44831112 - AluJo SINE Alu 0 312 237 282 173 0 0 chr2 208425471 208425523 -44831060 - AluJo SINE Alu -161 141 90 351 0 0 0 chr2 208425539 208425578 -44831005 + (TC)n Simple_repeat Simple_repeat 1 39 0 1729 182 0 0 chr2 208425578 208425874 -44830709 - AluJo SINE Alu -16 296 1 457 276 89 66 chr2 208426113 208426343 -44830240 + L1MC4a LINE L1 5620 5750 -371 2099 131 0 0 chr2 208426343 208426648 -44829935 - AluSx SINE Alu -7 305 1 457 276 89 66 chr2 208426648 208426674 -44829909 + L1MC4a LINE L1 5750 5774 -347 32 0 0 0 chr2 208426734 208426766 -44829817 + AT_rich Low_complexity Low_complexity 1 32 0 2302 97 0 0 chr2 208426806 208427114 -44829469 - AluSx SINE Alu -4 308 1 371 287 41 16 chr2 208428096 208428218 -44828365 + L2 LINE L2 2927 3051 -221 1229 253 138 38 chr2 208428313 208428391 -44828192 - L2 LINE L2 -13 3300 3231 1429 170 118 7 chr2 208428391 208428662 -44827921 + AluJo SINE Alu 1 301 -1 1229 253 138 38 chr2 208428662 208429086 -44827497 - L2 LINE L2 -82 3231 2851 2163 129 0 0 chr2 208429086 208429389 -44827194 - AluSx SINE Alu -9 303 1 1229 253 138 38 chr2 208429389 208429659 -44826924 - L2 LINE L2 -462 2851 2431 5018 141 15 68 chr2 208430790 208431032 -44825551 + MER49 LTR ERV1 1 254 -669 1768 171 3 0 chr2 208431032 208431331 -44825252 - AluJb SINE Alu -12 300 1 5018 141 15 68 chr2 208431331 208431727 -44824856 + MER49 LTR ERV1 254 573 -350 1955 108 0 73 chr2 208431727 208432043 -44824540 + AluSx SINE Alu 1 293 -19 5018 141 15 68 chr2 208432043 208432377 -44824206 + MER49 LTR ERV1 573 923 0 2052 125 0 3 chr2 208432380 208432683 -44823900 - AluSx SINE Alu -10 302 1 968 244 136 70 chr2 208432743 208433272 -44823311 + MLT1G LTR MaLR 19 582 -8 2166 105 0 0 chr2 208433504 208433798 -44822785 + AluSx SINE Alu 1 294 -18 1629 167 0 7 chr2 208434106 208434388 -44822195 - AluJo SINE Alu -32 280 1 1309 211 31 16 chr2 208434410 208434733 -44821850 + L1ME LINE L1 3962 4289 -1857 198 0 0 0 chr2 208441882 208441904 -44814679 + (CA)n Simple_repeat Simple_repeat 1 22 0 195 42 0 0 chr2 208442538 208442562 -44814021 + (TC)n Simple_repeat Simple_repeat 1 24 0 312 172 0 0 chr2 208445806 208445864 -44810719 + CT-rich Low_complexity Low_complexity 2 59 0 217 239 11 65 chr2 208449664 208449756 -44806827 + (TATATG)n Simple_repeat Simple_repeat 3 89 0 245 314 167 19 chr2 208450254 208450410 -44806173 - MIR3 SINE MIR 0 208 30 2131 114 3 0 chr2 208450638 208450945 -44805638 - AluSx SINE Alu -4 308 1 1644 144 45 21 chr2 208450988 208451279 -44805304 + AluSx SINE Alu 1 298 -14 1990 114 44 3 chr2 208452854 208453151 -44803432 + AluSq SINE Alu 1 309 -4 2060 120 3 0 chr2 208453533 208453825 -44802758 + AluSx SINE Alu 1 293 -19 665 236 112 11 chr2 208453940 208454118 -44802465 + MIR SINE MIR 57 252 -10 2317 94 0 0 chr2 208455737 208456045 -44800538 - AluSx SINE Alu -4 308 1 674 232 36 0 chr2 208456090 208456262 -44800321 - MIR SINE MIR -35 227 46 2074 132 7 0 chr2 208456658 208456968 -44799615 + AluSp SINE Alu 1 312 -1 2147 140 0 0 chr2 208457612 208457919 -44798664 + AluSx SINE Alu 1 307 -5 1505 142 0 55 chr2 208458696 208458950 -44797633 - AluSg/x SINE Alu 0 310 71 653 162 27 0 chr2 208458969 208458993 -44797590 - AluSg1 SINE Alu -195 114 92 2340 96 3 6 chr2 208458993 208459305 -44797278 - AluSp SINE Alu -2 311 1 653 162 27 0 chr2 208459305 208459391 -44797192 - AluSg1 SINE Alu -217 92 1 884 231 77 0 chr2 208459391 208459677 -44796906 + L1ME LINE L1 4319 4626 -1520 1085 161 0 0 chr2 208459677 208459839 -44796744 - AluJb SINE Alu -15 297 136 922 211 57 13 chr2 208459844 208460461 -44796122 + L1ME LINE L1 4619 5479 -687 963 246 83 0 chr2 208460479 208460755 -44795828 - L1ME1 LINE L1 -330 5836 5538 618 211 0 62 chr2 208460769 208460897 -44795686 - FLAM_C SINE Alu -20 123 4 1839 246 13 30 chr2 208460902 208461089 -44795494 - L1ME1 LINE L1 -1198 4948 4759 2392 97 0 3 chr2 208461089 208461399 -44795184 - AluSq SINE Alu -4 309 1 1839 246 13 30 chr2 208461399 208461836 -44794747 - L1ME1 LINE L1 -1387 4759 4335 341 306 44 39 chr2 208461836 208462016 -44794567 - HAL1 LINE L1 -1449 1058 878 522 127 127 16 chr2 208462057 208462183 -44794400 + L1MA7 LINE L1 6152 6291 0 730 166 21 7 chr2 208462428 208462573 -44794010 + L1MB7 LINE L1 4855 5001 -1145 4028 178 40 21 chr2 208462585 208463495 -44793088 + L1MB7 LINE L1 5207 6133 -51 2163 128 0 0 chr2 208463495 208463792 -44792791 + AluSx SINE Alu 1 297 -15 4028 178 40 21 chr2 208463792 208463838 -44792745 + L1MB7 LINE L1 6133 6177 -7 318 202 0 48 chr2 208464051 208464135 -44792448 + MER113 DNA MER1_type? 29 108 -413 1660 239 103 2 chr2 208464213 208464663 -44791920 + MLT1F1 LTR MaLR 1 498 -69 2063 117 17 34 chr2 208464663 208465014 -44791569 - THE1B LTR MaLR 0 364 20 786 288 52 27 chr2 208465039 208465295 -44791288 + MIR SINE MIR 6 262 0 342 49 49 0 chr2 208467515 208467576 -44789007 + (TA)n Simple_repeat Simple_repeat 2 65 0 2189 122 0 0 chr2 208467576 208467870 -44788713 - AluSx SINE Alu -18 294 1 643 297 49 32 chr2 208467988 208468234 -44788349 - MIR SINE MIR -5 257 8 806 271 36 70 chr2 208468587 208468945 -44787638 + MLT1J1 LTR MaLR 45 390 -56 277 229 16 0 chr2 208469383 208469444 -44787139 - L2 LINE L2 -6 3307 3246 1876 147 0 27 chr2 208469538 208469851 -44786732 + AluJb SINE Alu 1 305 0 2176 107 3 7 chr2 208470039 208470330 -44786253 + AluSx SINE Alu 1 290 -22 746 271 132 84 chr2 208470464 208470642 -44785941 + L1ME LINE L1 3904 4072 -2074 2279 115 3 0 chr2 208470642 208470947 -44785636 - AluSx SINE Alu -6 306 1 746 271 132 84 chr2 208470947 208471443 -44785140 + L1ME LINE L1 4072 4610 -1536 787 237 49 25 chr2 208472279 208472524 -44784059 - L1M4 LINE L1 -2163 3983 3733 391 258 136 19 chr2 208473180 208473417 -44783166 + L1ME LINE L1 5182 5440 -755 1609 179 0 48 chr2 208473417 208473732 -44782851 - AluJo SINE Alu 0 306 6 238 268 82 0 chr2 208473957 208474054 -44782529 + L1ME LINE L1 5762 5866 -304 2173 118 3 13 chr2 208474226 208474539 -44782044 + AluSq SINE Alu 1 310 -3 2950 77 23 5 chr2 208474556 208474995 -44781588 + L1PA10 LINE L1 5385 5831 -337 3635 80 18 8 chr2 208474995 208475485 -44781098 + L1PA10 LINE L1 5656 6163 -5 980 269 80 61 chr2 208475841 208476026 -44780557 - L1ME3A LINE L1 -44 6126 5946 2076 121 3 26 chr2 208476026 208476333 -44780250 - AluSx SINE Alu -12 300 1 980 269 80 61 chr2 208476333 208476687 -44779896 - L1ME3A LINE L1 -224 5946 5577 572 113 0 0 chr2 208476689 208476769 -44779814 + AluS SINE Alu 1 80 -232 530 217 86 0 chr2 208476769 208476924 -44779659 - L1ME3A LINE L1 -573 5591 5420 247 385 86 13 chr2 208476947 208477181 -44779402 + L2 LINE L2 999 1249 -2065 21 0 0 0 chr2 208477549 208477570 -44779013 + AT_rich Low_complexity Low_complexity 1 21 0 1794 137 0 8 chr2 208477617 208477879 -44778704 + AluSx SINE Alu 35 294 -18 1738 191 3 7 chr2 208477948 208478251 -44778332 - AluSx SINE Alu -10 302 1 206 292 18 47 chr2 208478505 208478676 -44777907 + CT-rich Low_complexity Low_complexity 1 166 0 180 290 108 43 chr2 208479120 208479213 -44777370 - L2 LINE L2 0 3272 3174 21 0 0 0 chr2 208480096 208480117 -44776466 + AT_rich Low_complexity Low_complexity 1 21 0 286 253 13 27 chr2 208480353 208480428 -44776155 + L2 LINE L2 3199 3272 0 509 264 95 80 chr2 208481841 208482306 -44774277 - MLT1J LTR MaLR -4 507 36 2039 127 3 14 chr2 208482596 208482912 -44773671 + AluSx SINE Alu 1 313 0 1243 137 0 5 chr2 208483070 208483274 -44773309 - L1PA13 LINE L1 0 6163 5961 873 244 53 0 chr2 208483428 208483637 -44772946 + MER58A DNA MER1_type 4 223 -1 252 0 0 0 chr2 208483934 208483962 -44772621 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2081 88 11 18 chr2 208483964 208484249 -44772334 - AluSq SINE Alu -30 283 1 228 323 202 24 chr2 208484449 208484573 -44772010 + L2 LINE L2 3117 3262 -10 2159 223 64 34 chr2 208484684 208485226 -44771357 + MER77 LTR ERV1 62 673 -4 306 282 0 0 chr2 208485308 208485393 -44771190 - MIR SINE MIR -59 203 119 2000 167 0 0 chr2 208486363 208486662 -44769921 - AluJb SINE Alu -13 299 1 1801 160 51 3 chr2 208487487 208487781 -44768802 - AluJo SINE Alu 0 312 5 949 164 0 0 chr2 208488322 208488491 -44768092 - AluJb SINE Alu 0 305 137 5339 216 27 4 chr2 208488491 208489545 -44767038 + L1PB1 LINE L1 2118 3210 -2936 2338 106 3 0 chr2 208489545 208489857 -44766726 + AluSp SINE Alu 1 313 0 5339 216 27 4 chr2 208489857 208490154 -44766429 + L1PB1 LINE L1 3210 3499 -2647 * 5691 161 17 7 chr2 208490153 208492058 -44764525 + L1PB1 LINE L1 4212 6130 -21 189 0 0 0 chr2 208492069 208492090 -44764493 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 715 122 0 70 chr2 208492758 208492873 -44763710 + AluJb SINE Alu 11 117 -195 270 73 0 0 chr2 208492874 208492915 -44763668 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 7613 22 0 0 chr2 208492932 208494306 -44762277 - L1PA4 LINE L1 -4 6151 4776 2109 117 34 0 chr2 208495339 208495630 -44760953 - AluSx SINE Alu -11 301 1 278 255 75 0 chr2 208495839 208495945 -44760638 + MER90 LTR ERV1 499 612 -2 1012 206 5 5 chr2 208496013 208496222 -44760361 + MER3 DNA MER1_type 1 209 0 998 66 0 8 chr2 208496251 208496372 -44760211 - AluSg/x SINE Alu -106 204 85 7255 72 2 6 chr2 208496374 208497382 -44759201 + L1P3 LINE L1 724 1727 -4734 2216 98 6 25 chr2 208497535 208497851 -44758732 - AluSq SINE Alu -3 310 1 824 184 86 0 chr2 208498116 208498268 -44758315 + MER5B DNA MER1_type 1 165 -13 214 258 61 0 chr2 208498405 208498471 -44758112 - MIR SINE MIR -74 188 119 28 0 0 0 chr2 208498506 208498534 -44758049 + AT_rich Low_complexity Low_complexity 1 28 0 784 268 38 34 chr2 208499412 208499647 -44756936 + MIR SINE MIR 3 238 -24 192 366 85 29 chr2 208500931 208501177 -44755406 + L2 LINE L2 2601 2860 -454 216 288 61 0 chr2 208501199 208501265 -44755318 + L2 LINE L2 3202 3271 -42 1452 135 0 57 chr2 208501266 208501547 -44755036 - MER102b DNA MER1_type -26 315 51 590 267 245 15 chr2 208501641 208501967 -44754616 + L2 LINE L2 2869 3269 -3 1998 155 65 31 chr2 208503704 208504219 -44752364 - MLT2A2 LTR ERVL 0 554 1 692 222 127 31 chr2 208504219 208504576 -44752007 + MER39 LTR ERV1 311 562 -3 1724 140 104 68 chr2 208504657 208505015 -44751568 - MSTC LTR MaLR 0 428 52 2155 120 3 0 chr2 208505015 208505333 -44751250 - AluSp SINE Alu 0 313 2 1724 140 104 68 chr2 208505333 208505387 -44751196 - MSTC LTR MaLR -376 52 1 1605 189 86 9 chr2 208505484 208505823 -44750760 - MLT1A1 LTR MaLR 0 365 1 217 51 51 0 chr2 208507749 208507788 -44748795 + (TTA)n Simple_repeat Simple_repeat 2 42 0 1063 131 0 13 chr2 208507796 208507949 -44748634 - FRAM SINE Alu -30 146 1 1764 137 0 32 chr2 208507965 208508250 -44748333 - AluSx SINE Alu -36 276 1 2361 86 0 13 chr2 208508622 208508926 -44747657 - AluSx SINE Alu -12 300 1 2288 123 42 49 chr2 208509088 208509519 -44747064 + MSTA LTR MaLR 1 428 0 182 256 0 0 chr2 208509563 208509602 -44746981 + L2 LINE L2 3261 3299 -14 21 0 0 0 chr2 208510354 208510375 -44746208 + AT_rich Low_complexity Low_complexity 1 21 0 2297 98 3 3 chr2 208510659 208510956 -44745627 + AluSx SINE Alu 1 297 -15 203 277 0 31 chr2 208512127 208512192 -44744391 + (CAGAGA)n Simple_repeat Simple_repeat 3 65 0 430 276 94 26 chr2 208512286 208512490 -44744093 + MIR SINE MIR 36 249 -13 2177 37 0 150 chr2 208513134 208513487 -44743096 + AluY SINE Alu 1 300 -11 1996 238 109 5 chr2 208513701 208514307 -44742276 + L1ME3A LINE L1 5493 6161 -9 340 250 24 12 chr2 208514445 208514529 -44742054 + MIR3 SINE MIR 92 176 -32 2991 168 4 8 chr2 208514822 208515352 -44741231 + Tigger4(Zombi) DNA MER2_type 4 531 -2200 926 111 72 0 chr2 208515348 208515501 -44741082 + Tigger4(Zombi) DNA MER2_type 2568 2731 0 * 23 33 0 0 chr2 208519150 208519180 -44737403 + AT_rich Low_complexity Low_complexity 1 30 0 1172 204 29 74 chr2 208519494 208519683 -44736900 - L1ME1 LINE L1 -92 6074 5909 15179 35 4 16 chr2 208519683 208522339 -44734244 - L1PA4 LINE L1 -3 6152 3516 1172 204 29 74 chr2 208522339 208522526 -44734057 - L1ME1 LINE L1 -257 5909 5715 2328 204 34 19 chr2 208522526 208522564 -44734019 - MLT2B3 LTR ERVL 0 554 518 207 69 0 0 chr2 208522564 208522593 -44733990 + (TA)n Simple_repeat Simple_repeat 2 30 0 2328 204 34 19 chr2 208522593 208523087 -44733496 - MLT2B3 LTR ERVL -36 518 14 1812 211 37 48 chr2 208523089 208523397 -44733186 - L1ME1 LINE L1 -463 5703 5393 2221 87 3 58 chr2 208523397 208523707 -44732876 - AluSg SINE Alu -15 295 3 1812 211 37 48 chr2 208523707 208524332 -44732251 - L1ME1 LINE L1 -773 5393 4773 * 1998 239 54 12 chr2 208524326 208524789 -44731794 - L1ME1 LINE L1 -1600 4546 4047 2299 95 14 0 chr2 208524789 208525084 -44731499 + AluSg SINE Alu 1 299 -11 1998 239 54 12 chr2 208525084 208525272 -44731311 - L1ME1 LINE L1 -2099 4047 3868 891 203 0 0 chr2 208525301 208525449 -44731134 - FRAM SINE Alu -30 146 1 384 280 0 0 chr2 208525449 208525556 -44731027 - L1ME1 LINE L1 -2296 3850 3744 374 164 0 0 chr2 208525586 208525653 -44730930 - MER41B LTR ERV1 -88 547 481 1959 121 26 0 chr2 208526778 208527050 -44729533 - AluSx SINE Alu -33 279 1 280 246 116 7 chr2 208527411 208527549 -44729034 - L1ME3A LINE L1 -218 5952 5800 233 207 0 35 chr2 208527551 208527609 -44728974 + Tigger5 DNA MER2_type 3 58 -2265 * 1312 177 19 19 chr2 208527598 208527863 -44728720 + Tigger5 DNA MER2_type 2059 2323 0 1876 159 30 0 chr2 208527970 208528272 -44728311 + AluSq SINE Alu 1 311 -2 844 190 52 91 chr2 208528331 208528520 -44728063 + MIR SINE MIR 36 216 -46 2415 77 0 3 chr2 208528520 208528820 -44727763 - AluY SINE Alu -12 299 1 844 190 52 91 chr2 208528820 208528862 -44727721 + MIR SINE MIR 216 258 -4 222 341 32 65 chr2 208529694 208529817 -44726766 + L2 LINE L2 3153 3271 -1 241 366 40 31 chr2 208530147 208530371 -44726212 - L3b LINE CR1 -253 1330 1105 292 296 104 8 chr2 208531203 208531363 -44725220 + MIR SINE MIR 23 197 -65 847 177 4 86 chr2 208531487 208531719 -44724864 + MER58C DNA MER1_type 2 214 -1 507 289 133 44 chr2 208533067 208533427 -44723156 + L1ME LINE L1 4628 5019 -1127 269 26 26 0 chr2 208533455 208533493 -44723090 + (TTG)n Simple_repeat Simple_repeat 1 39 0 1477 156 66 0 chr2 208533521 208533765 -44722818 - AluJb SINE Alu -52 260 1 248 245 12 61 chr2 208533946 208534109 -44722474 + L1ME LINE L1 5260 5414 -2394 272 274 174 16 chr2 208534137 208534327 -44722256 + L1ME LINE L1 5560 5779 -342 340 356 96 14 chr2 208536751 208536897 -44719686 - L2 LINE L2 0 3272 3115 232 294 59 59 chr2 208537123 208537242 -44719341 + L2 LINE L2 3154 3272 0 2093 135 0 0 chr2 208537535 208537831 -44718752 - AluSx SINE Alu -12 300 5 21 71 0 0 chr2 208538302 208538344 -44718239 + AT_rich Low_complexity Low_complexity 1 42 0 1993 93 38 17 chr2 208538464 208538754 -44717829 - AluSq SINE Alu -17 296 1 182 310 17 0 chr2 208538805 208538863 -44717720 - L2 LINE L2 0 3272 3214 262 288 108 5 chr2 208539369 208539591 -44716992 - L1MC4a LINE L1 -1857 5951 5707 327 229 55 55 chr2 208539801 208539910 -44716673 - MER5B DNA MER1_type -2 176 68 220 291 0 25 chr2 208540319 208540398 -44716185 + CT-rich Low_complexity Low_complexity 2 78 0 448 302 7 22 chr2 208543336 208543475 -44713108 + MIR SINE MIR 16 152 -56 204 315 105 21 chr2 208544192 208544335 -44712248 - MIR3 SINE MIR -11 197 43 2262 114 3 0 chr2 208544722 208545028 -44711555 + AluSx SINE Alu 1 307 -5 185 383 12 12 chr2 208546957 208547038 -44709545 + L3 LINE CR1 1062 1142 -435 29 28 0 0 chr2 208550915 208550951 -44705632 + AT_rich Low_complexity Low_complexity 1 36 0 181 229 0 0 chr2 208551367 208551402 -44705181 + MIR SINE MIR 118 152 -56 1602 144 3 120 chr2 208551663 208551996 -44704587 + AluSx SINE Alu 1 294 -18 213 39 0 0 chr2 208552658 208552684 -44703899 + (CA)n Simple_repeat Simple_repeat 1 26 0 546 262 128 33 chr2 208553860 208554110 -44702473 - LTR33A LTR ERVL -5 518 293 1241 268 74 67 chr2 208554110 208554797 -44701786 + MER115 DNA AcHobo 1 692 -1 546 262 128 33 chr2 208554797 208554947 -44701636 - LTR33A LTR ERVL -230 293 2 207 184 0 61 chr2 208555066 208555115 -44701468 + CT-rich Low_complexity Low_complexity 3 48 0 449 320 80 26 chr2 208555373 208555588 -44700995 + MIR SINE MIR 31 250 -12 1703 196 123 7 chr2 208555608 208556056 -44700527 + MLT1D LTR MaLR 6 505 0 2080 138 59 6 chr2 208556579 208556934 -44699649 + MLT1A2 LTR MaLR 1 374 0 234 241 253 0 chr2 208557412 208557491 -44699092 + MIR SINE MIR 42 140 -122 444 266 44 39 chr2 208557491 208557720 -44698863 + L1ME LINE L1 5362 5591 -571 305 222 37 44 chr2 208557775 208557910 -44698673 + LTR33 LTR ERVL 384 517 -4 203 402 0 9 chr2 208557978 208558085 -44698498 - L2 LINE L2 -527 2787 2682 2217 119 0 10 chr2 208558384 208558686 -44697897 + AluSx SINE Alu 3 301 -11 758 321 54 61 chr2 208558819 208559407 -44697176 + L2 LINE L2 2216 2799 -515 559 160 193 0 chr2 208559456 208559575 -44697008 + MIR SINE MIR 40 181 -81 2600 36 3 3 chr2 208559755 208560063 -44696520 - AluY SINE Alu -3 308 1 235 304 80 36 chr2 208560228 208560366 -44696217 + L2 LINE L2 3166 3309 -4 21 0 0 0 chr2 208560833 208560854 -44695729 + AT_rich Low_complexity Low_complexity 1 21 0 593 133 0 0 chr2 208562160 208562258 -44694325 + AluJb SINE Alu 208 305 -7 574 148 0 33 chr2 208562268 208562390 -44694193 + (GAAA)n Simple_repeat Simple_repeat 3 120 0 238 263 30 95 chr2 208564773 208564918 -44691665 - MIR SINE MIR -69 139 5 1385 294 147 28 chr2 208566299 208566919 -44689664 - L3 LINE CR1 -1 1576 835 2453 118 47 38 chr2 208566919 208567343 -44689240 + MSTC LTR MaLR 1 428 0 1385 294 147 28 chr2 208567343 208567537 -44689046 - L3 LINE CR1 -742 835 665 207 404 102 18 chr2 208567533 208567699 -44688884 - L2 LINE L2 -1 3271 3092 * 264 353 26 72 chr2 208567739 208568045 -44688538 - L2 LINE L2 -566 2748 2457 362 317 151 53 chr2 208568463 208568727 -44687856 - L3 LINE CR1 -911 666 360 1265 72 0 0 chr2 208568727 208568893 -44687690 - L1PA10 LINE L1 -11 6157 5992 362 317 151 53 chr2 208568893 208568966 -44687617 - L3 LINE CR1 -1217 360 296 1732 160 39 20 chr2 208568967 208569309 -44687274 - AluSx SINE Alu 0 348 1 773 300 29 4 chr2 208569875 208570152 -44686431 - LTR16A1 LTR ERVL 0 457 174 354 98 0 0 chr2 208570223 208570274 -44686309 + (TG)n Simple_repeat Simple_repeat 1 51 0 29 47 0 0 chr2 208570448 208570491 -44686092 + AT_rich Low_complexity Low_complexity 1 43 0 2537 40 0 3 chr2 208570546 208570848 -44685735 - AluY SINE Alu -9 302 2 526 298 149 57 chr2 208570974 208571492 -44685091 + L2 LINE L2 2456 3017 -255 432 95 0 0 chr2 208571522 208571585 -44684998 + MSTC LTR MaLR 244 306 -122 333 286 7 29 chr2 208571650 208571790 -44684793 + L2 LINE L2 3115 3251 -62 1694 188 10 3 chr2 208571812 208572110 -44684473 - AluJb SINE Alu -12 300 1 763 229 151 0 chr2 208572360 208572552 -44684031 - MER58A DNA MER1_type -3 221 1 1787 162 101 25 chr2 208572566 208572962 -44683621 - MSTC LTR MaLR 0 428 3 351 261 9 45 chr2 208573107 208573218 -44683365 + L2 LINE L2 3201 3307 -6 3159 305 44 39 chr2 208573715 208574619 -44681964 - HERV16 LTR ERVL -1936 3060 2547 2291 99 3 3 chr2 208574619 208574922 -44681661 + AluSp SINE Alu 1 303 -10 3159 305 44 39 chr2 208574922 208575744 -44680839 - HERV16 LTR ERVL -2449 2547 1731 1751 324 61 31 chr2 208576338 208577260 -44679323 - HERV16 LTR ERVL -4000 996 48 633 284 47 53 chr2 208577303 208577624 -44678959 - LTR16A LTR ERVL -97 353 35 1059 174 6 0 chr2 208577751 208577929 -44678654 - AluJb SINE Alu -14 298 120 2015 133 3 3 chr2 208578813 208579106 -44677477 + AluSx SINE Alu 1 293 -19 2242 122 0 3 chr2 208579630 208579942 -44676641 - AluSq SINE Alu -2 311 1 381 288 80 18 chr2 208580494 208580657 -44675926 - MIR SINE MIR -79 183 11 2389 56 0 3 chr2 208582013 208582326 -44674257 - AluSg SINE Alu 0 312 1 465 194 206 19 chr2 208582434 208582594 -44673989 + MIR SINE MIR 73 262 0 622 268 62 22 chr2 208583066 208583245 -44673338 + MER5A DNA MER1_type 4 189 0 1823 183 10 0 chr2 208584560 208584861 -44671722 - AluJo SINE Alu -8 304 1 237 65 0 0 chr2 208584887 208584918 -44671665 + (CA)n Simple_repeat Simple_repeat 1 31 0 2008 128 0 11 chr2 208586040 208586322 -44670261 + AluSx SINE Alu 1 279 -33 861 169 8 12 chr2 208586326 208586561 -44670022 + GA-rich Low_complexity Low_complexity 1 234 0 318 318 53 0 chr2 208586738 208586920 -44669663 - MER91B DNA MER1_type -11 179 29 438 323 73 30 chr2 208586961 208587193 -44669390 + L2 LINE L2 3031 3272 0 288 0 0 0 chr2 208587327 208587359 -44669224 + (TG)n Simple_repeat Simple_repeat 2 33 0 226 204 41 0 chr2 208587423 208587472 -44669111 + L2 LINE L2 3263 3313 0 21 36 0 0 chr2 208588541 208588569 -44668014 + AT_rich Low_complexity Low_complexity 1 28 0 27 0 0 0 chr2 208588756 208588783 -44667800 + AT_rich Low_complexity Low_complexity 1 27 0 248 259 46 56 chr2 208588965 208589073 -44667510 + MIR SINE MIR 4 110 -98 2164 157 42 5 chr2 208589908 208590290 -44666293 + MSTD LTR MaLR 1 396 0 314 308 44 0 chr2 208591536 208591627 -44664956 + L2 LINE L2 3169 3263 -9 341 339 46 0 chr2 208591837 208591946 -44664637 + MIR SINE MIR 29 142 -120 267 299 0 8 chr2 208592838 208592955 -44663628 - MER113 DNA MER1_type? -405 116 1 387 260 90 37 chr2 208594175 208594349 -44662234 + MIR SINE MIR 39 225 -37 1973 126 40 0 chr2 208594817 208595166 -44661417 - L1MA5 LINE L1 -2 6298 5936 2305 96 6 3 chr2 208595193 208595505 -44661078 - AluSp SINE Alu 0 313 1 273 305 21 11 chr2 208595564 208595659 -44660924 + MLT1I LTR MaLR 196 291 -118 421 388 65 19 chr2 208596359 208596774 -44659809 + L3b LINE CR1 1102 1535 -48 195 353 60 37 chr2 208597224 208597442 -44659141 + L3b LINE CR1 1200 1422 -161 2132 133 7 3 chr2 208597857 208598166 -44658417 - AluSx SINE Alu -2 310 1 14163 169 61 6 chr2 208598221 208599579 -44657004 - L1PB1 LINE L1 0 6867 5585 2052 128 0 0 chr2 208599579 208599901 -44656682 - AluSg SINE Alu 0 322 1 14163 169 61 6 chr2 208599901 208600279 -44656304 - L1PB1 LINE L1 -1282 5585 5229 180 0 0 0 chr2 208600279 208600299 -44656284 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 14163 169 61 6 chr2 208600299 208601506 -44655077 - L1PB1 LINE L1 -1638 5229 4090 269 51 26 0 chr2 208601506 208601545 -44655038 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 14163 169 61 6 chr2 208601545 208602654 -44653929 - L1PB1 LINE L1 -2777 4090 3043 2242 113 0 28 chr2 208602654 208602974 -44653609 - AluY SINE Alu 0 311 1 14163 169 61 6 chr2 208602974 208605409 -44651174 - L1PB1 LINE L1 -3824 3043 6 217 231 123 15 chr2 208605819 208605884 -44650699 + MER5A DNA MER1_type 117 188 -1 182 324 122 14 chr2 208606021 208606095 -44650488 - L2 LINE L2 -91 3181 3100 595 160 166 86 chr2 208606256 208606431 -44650152 - MER5A DNA MER1_type 0 189 1 941 165 80 47 chr2 208606439 208606651 -44649932 + MER20 DNA MER1_type 1 219 0 785 273 0 0 chr2 208606659 208606820 -44649763 + MER5B DNA MER1_type 9 169 -9 1098 290 44 33 chr2 208606888 208607368 -44649215 + LTR33 LTR ERVL 17 501 -20 828 179 13 0 chr2 208607364 208607515 -44649068 + MER45A DNA AcHobo 26 178 0 * 1591 146 31 14 chr2 208607823 208608588 -44647995 - L1MA9 LINE L1 -10 7721 6788 248 51 0 26 chr2 208608588 208608627 -44647956 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 8496 196 34 35 chr2 208608628 208610956 -44645627 - L1MA9 LINE L1 -852 6713 4368 2260 110 7 0 chr2 208610956 208611264 -44645319 - AluSp SINE Alu -3 310 1 8496 196 34 35 chr2 208611264 208612646 -44643937 - L1MA9 LINE L1 -3197 4368 2986 2102 149 0 10 chr2 208612649 208612957 -44643626 - AluSx SINE Alu -5 307 3 848 209 22 11 chr2 208612961 208613143 -44643440 - AluJb SINE Alu -12 300 117 1463 253 8 8 chr2 208613149 208613541 -44643042 - L1M2 LINE L1 -4272 2577 2186 1081 266 18 0 chr2 208613536 208613811 -44642772 - L1MCa LINE L1 -1315 5111 4832 * 7332 195 39 44 chr2 208613814 208616323 -44640260 - L1MCa LINE L1 -1773 4653 2037 250 116 0 0 chr2 208616323 208616366 -44640217 - Alu SINE Alu 0 302 260 7332 195 39 44 chr2 208616366 208617912 -44638671 - L1MCa LINE L1 -4389 2037 484 822 176 44 0 chr2 208617912 208618071 -44638512 - L1MCa LINE L1 -6183 243 78 1139 202 5 5 chr2 208618113 208618326 -44638257 + L1ME2 LINE L1 5533 5745 -421 1412 177 24 37 chr2 208618329 208618683 -44637900 + L1ME2 LINE L1 5827 6334 0 28 61 0 0 chr2 208619201 208619250 -44637333 + GC_rich Low_complexity Low_complexity 1 49 0 2460 42 0 23 chr2 208620609 208620917 -44635666 - AluY SINE Alu 0 311 11 23 33 0 0 chr2 208621726 208621756 -44634827 + AT_rich Low_complexity Low_complexity 1 30 0 25 0 0 0 chr2 208621964 208621989 -44634594 + AT_rich Low_complexity Low_complexity 1 25 0 1456 141 13 0 chr2 208623019 208623246 -44633337 + AluJb SINE Alu 81 310 -2 413 364 7 0 chr2 208624481 208624621 -44631962 - MIR3 SINE MIR -9 199 59 22 35 0 0 chr2 208624652 208624681 -44631902 + AT_rich Low_complexity Low_complexity 1 29 0 2143 130 3 9 chr2 208625230 208625545 -44631038 + AluSq SINE Alu 1 313 0 600 49 0 0 chr2 208625558 208625640 -44630943 + AluY SINE Alu 1 82 -229 606 208 131 18 chr2 208625911 208626079 -44630504 + MIR SINE MIR 62 248 -14 2165 93 17 0 chr2 208626518 208626807 -44629776 + AluSg SINE Alu 3 296 -14 219 295 51 0 chr2 208626991 208627069 -44629514 + MIR3 SINE MIR 125 206 -2 1287 166 136 8 chr2 208627235 208627352 -44629231 + AluJb SINE Alu 1 102 -200 226 0 59 0 chr2 208627352 208627386 -44629197 + (CAAA)n Simple_repeat Simple_repeat 4 39 0 1287 166 136 8 chr2 208627386 208627533 -44629050 + AluJb SINE Alu 102 299 -3 291 316 73 7 chr2 208627572 208627708 -44628875 + MIR SINE MIR 48 192 -70 23 54 0 0 chr2 208628109 208628146 -44628437 + AT_rich Low_complexity Low_complexity 1 37 0 31 58 0 0 chr2 208628547 208628599 -44627984 + AT_rich Low_complexity Low_complexity 1 52 0 24 0 0 0 chr2 208629752 208629776 -44626807 + AT_rich Low_complexity Low_complexity 1 24 0 270 81 0 0 chr2 208630527 208630564 -44626019 + (TATG)n Simple_repeat Simple_repeat 2 38 0 240 173 0 39 chr2 208631275 208631327 -44625256 - L2 LINE L2 -336 2977 2928 1073 274 70 49 chr2 208632328 208632875 -44623708 - MLT1F1 LTR MaLR -9 558 1 2273 125 0 0 chr2 208632926 208633231 -44623352 + AluSx SINE Alu 1 305 -7 312 289 61 26 chr2 208633392 208633506 -44623077 - L2 LINE L2 -1 3271 3154 238 270 80 99 chr2 208633969 208634321 -44622262 - L2 LINE L2 -1111 2203 1859 44 56 0 0 chr2 208635284 208635356 -44621227 + AT_rich Low_complexity Low_complexity 1 72 0 1297 236 108 72 chr2 208635372 208635650 -44620933 - MLT1J LTR MaLR -16 495 192 1634 175 18 4 chr2 208635650 208635924 -44620659 - AluJo SINE Alu -26 286 9 1297 236 108 72 chr2 208635924 208636116 -44620467 - MLT1J LTR MaLR -319 192 8 189 378 104 7 chr2 208636127 208636262 -44620321 - L3b LINE CR1 -168 1415 1268 397 180 138 42 chr2 208636343 208636510 -44620073 - Charlie7 DNA MER1_type -1 2611 2429 228 200 33 0 chr2 208636496 208636556 -44620027 - Charlie7 DNA MER1_type -2507 105 44 * 27 29 0 0 chr2 208638342 208638376 -44618207 + AT_rich Low_complexity Low_complexity 1 34 0 586 296 143 28 chr2 208638587 208639155 -44617428 - L1ME4a LINE L1 -195 5926 5294 21 0 0 0 chr2 208639507 208639528 -44617055 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 208639831 208639853 -44616730 + AT_rich Low_complexity Low_complexity 1 22 0 940 335 94 18 chr2 208639963 208640569 -44616014 + L3 LINE CR1 768 1419 -158 2348 84 0 7 chr2 208641052 208641351 -44615232 + AluSq SINE Alu 1 297 -16 234 0 0 0 chr2 208641787 208641813 -44614770 + (TG)n Simple_repeat Simple_repeat 2 27 0 2137 187 7 17 chr2 208641916 208642334 -44614249 + MLT2D LTR ERVL 1 414 0 245 288 30 0 chr2 208643418 208643484 -44613099 + L3 LINE CR1 1499 1566 -11 436 292 180 0 chr2 208647652 208647830 -44608753 - MIR SINE MIR 0 262 53 1863 128 60 4 chr2 208647845 208648126 -44608457 + AluSx SINE Alu 1 297 -15 34 0 0 0 chr2 208648136 208648170 -44608413 + AT_rich Low_complexity Low_complexity 1 34 0 270 305 86 75 chr2 208648204 208648391 -44608192 + MER5A DNA MER1_type 1 189 0 187 239 164 30 chr2 208648570 208648637 -44607946 + MIR3 SINE MIR 121 196 -12 586 141 0 0 chr2 208648811 208648896 -44607687 + AluSc SINE Alu 163 247 -62 351 238 75 27 chr2 208648899 208649046 -44607537 + L1ME4a LINE L1 5694 5847 -274 193 314 29 29 chr2 208649376 208649481 -44607102 + L2 LINE L2 2572 2676 -638 244 279 0 23 chr2 208649483 208649569 -44607014 + L1ME4a LINE L1 5562 5645 -476 1042 80 0 0 chr2 208649576 208649713 -44606870 + AluSp/q SINE Alu 168 304 -9 729 223 71 73 chr2 208649714 208650082 -44606501 + L1ME4a LINE L1 5659 6025 -96 244 310 114 80 chr2 208650286 208650673 -44605910 + L2 LINE L2 2868 3267 -5 2032 63 0 0 chr2 208651064 208651301 -44605282 - AluSp SINE Alu -24 289 53 359 272 193 0 chr2 208653508 208653622 -44602961 + MIR SINE MIR 60 195 -67 1868 151 3 30 chr2 208654424 208654722 -44601861 + AluJo SINE Alu 1 290 -22 304 338 7 22 chr2 208654944 208655083 -44601500 - MLT1H LTR MaLR -356 193 57 703 153 8 8 chr2 208655247 208655371 -44601212 + MER33 DNA MER1_type 32 155 -169 3375 238 32 51 chr2 208655383 208656889 -44599694 + L1PA15 LINE L1 95 1975 -4812 2234 91 0 0 chr2 208656889 208657174 -44599409 + AluY SINE Alu 19 303 -8 14838 213 19 9 chr2 208657190 208659066 -44597517 + L1PA15 LINE L1 2318 4241 -2556 1753 178 45 0 chr2 208659066 208659353 -44597230 + AluJb SINE Alu 2 301 -11 14838 213 19 9 chr2 208659353 208660789 -44595794 + L1PA15 LINE L1 4241 5662 -1135 2029 98 3 3 chr2 208660789 208661076 -44595507 - MER75 DNA T2_type -1 513 227 3824 111 70 91 chr2 208661082 208661606 -44594977 + L1PA15 LINE L1 6038 6571 -245 339 161 0 32 chr2 208661606 208661668 -44594915 + AluS SINE Alu 1 60 -240 1968 137 7 7 chr2 208661622 208661906 -44594677 + AluSx SINE Alu 15 298 -14 3824 111 70 91 chr2 208661668 208662160 -44594423 + L1PA15 LINE L1 6571 6816 0 676 263 269 36 chr2 208662440 208662831 -44593752 - L2 LINE L2 -1 3312 2831 288 0 0 0 chr2 208662867 208662899 -44593684 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 30 0 0 0 chr2 208662899 208662929 -44593654 + AT_rich Low_complexity Low_complexity 1 30 0 1468 41 0 0 chr2 208663126 208663298 -44593285 - L1PA3 LINE L1 -18 6137 5966 1222 195 38 19 chr2 208663340 208663658 -44592925 + MER33 DNA MER1_type 1 324 0 693 189 27 27 chr2 208663661 208663809 -44592774 + L1PA15 LINE L1 5997 6144 -21 21 71 0 0 chr2 208663831 208663873 -44592710 + AT_rich Low_complexity Low_complexity 1 42 0 425 318 175 14 chr2 208665113 208665393 -44591190 - L2 LINE L2 -665 2649 2325 933 236 132 5 chr2 208665395 208665797 -44590786 - L1MEc LINE L1 -1718 4497 4045 608 241 18 6 chr2 208665797 208665963 -44590620 - LTR16B LTR ERVL 0 464 297 346 235 12 0 chr2 208666411 208666496 -44590087 - ERVL LTR ERVL -1535 4229 4144 1226 291 46 22 chr2 208666587 208667133 -44589450 - ERVL LTR ERVL -1303 3693 3135 867 299 13 11 chr2 208667247 208667625 -44588958 - L1MEc LINE L1 -2514 3701 3323 * 2286 297 87 26 chr2 208667613 208669261 -44587322 - L1MEc LINE L1 -4613 1783 35 260 195 35 138 chr2 208669267 208669354 -44587229 - L2 LINE L2 -1017 2297 2220 571 276 240 15 chr2 208669488 208669879 -44586704 - L2 LINE L2 -1147 2167 1689 2838 221 43 6 chr2 208669999 208670629 -44585954 - MER82 DNA MER2_type 0 653 1 448 319 66 33 chr2 208670656 208670838 -44585745 + MIR3 SINE MIR 10 197 -11 286 300 89 17 chr2 208671671 208671851 -44584732 - LTR33 LTR ERVL 0 521 329 233 276 81 0 chr2 208671985 208672072 -44584511 - LTR33 LTR ERVL -348 173 80 1506 239 22 11 chr2 208672603 208673055 -44583528 - MLT1C LTR MaLR -10 457 1 818 240 17 38 chr2 208673273 208673560 -44583023 + L1MEc LINE L1 31 311 -6085 575 285 75 11 chr2 208674061 208674342 -44582241 + HAL1 LINE L1 1486 1784 -723 239 253 0 33 chr2 208674468 208674559 -44582024 + HAL1b LINE L1 749 836 -512 439 17 17 0 chr2 208674879 208674938 -44581645 + L1PA5 LINE L1 5874 5933 -221 642 256 205 20 chr2 208676276 208676569 -44580014 - L2 LINE L2 -2 3311 2965 593 138 117 103 chr2 208676811 208676875 -44579708 + MER30 DNA MER1_type 84 146 -84 2346 97 7 0 chr2 208676875 208677174 -44579409 + AluSq SINE Alu 1 301 -12 593 138 117 103 chr2 208677174 208677254 -44579329 + MER30 DNA MER1_type 146 230 0 388 316 29 14 chr2 208677260 208677399 -44579184 + L2 LINE L2 3173 3313 0 288 0 0 0 chr2 208678455 208678487 -44578096 + (A)n Simple_repeat Simple_repeat 1 32 0 330 328 20 91 chr2 208678696 208678894 -44577689 + MIR3 SINE MIR 18 201 -7 243 0 0 0 chr2 208679931 208679958 -44576625 + (T)n Simple_repeat Simple_repeat 1 27 0 228 100 0 0 chr2 208680390 208680430 -44576153 + (A)n Simple_repeat Simple_repeat 1 40 0 21 0 0 0 chr2 208680480 208680501 -44576082 + AT_rich Low_complexity Low_complexity 1 21 0 383 292 21 16 chr2 208680946 208681138 -44575445 - MERVL LTR ERVL -3435 2050 1858 2457 296 91 33 chr2 208681378 208682821 -44573762 - MERVL LTR ERVL -3468 1528 2 596 278 87 51 chr2 208682861 208683195 -44573388 - LTR16A LTR ERVL -50 400 55 304 302 85 8 chr2 208683407 208683536 -44573047 - MIR SINE MIR -18 244 106 2162 55 4 0 chr2 208683556 208683811 -44572772 - AluY SINE Alu -11 300 45 23 33 0 0 chr2 208685035 208685065 -44571518 + AT_rich Low_complexity Low_complexity 1 30 0 294 273 28 11 chr2 208685246 208685373 -44571210 + L1ME LINE L1 5508 5633 -537 699 273 28 0 chr2 208685454 208685630 -44570953 + MER5A DNA MER1_type 9 189 0 292 204 45 0 chr2 208685862 208685950 -44570633 + (TATATG)n Simple_repeat Simple_repeat 1 92 0 475 258 120 24 chr2 208686147 208686314 -44570269 + MIR3 SINE MIR 19 201 -7 219 316 0 40 chr2 208687157 208687233 -44569350 - MIR SINE MIR -118 90 18 261 207 0 17 chr2 208687752 208687810 -44568773 - LTR52 LTR ERVL -62 359 303 237 114 91 0 chr2 208687810 208687854 -44568729 - MLT2D LTR ERVL 0 414 367 296 236 11 0 chr2 208687872 208687961 -44568622 + (TA)n Simple_repeat Simple_repeat 1 90 0 471 35 0 0 chr2 208687981 208688038 -44568545 + (TG)n Simple_repeat Simple_repeat 2 58 0 2216 128 0 0 chr2 208688043 208688349 -44568234 + AluSx SINE Alu 1 306 -6 1776 209 14 0 chr2 208688356 208688700 -44567883 - MLT2D LTR ERVL -65 349 1 641 233 115 39 chr2 208688700 208688978 -44567605 - LTR52 LTR ERVL -114 307 9 342 279 97 62 chr2 208691450 208691758 -44564825 - ERVL LTR ERVL -439 5325 5007 1208 302 63 64 chr2 208692125 208692620 -44563963 - ERVL LTR ERVL -1979 3017 2521 1580 123 15 15 chr2 208692620 208692930 -44563653 - AluY SINE Alu 0 324 15 1208 302 63 64 chr2 208692930 208693102 -44563481 - ERVL LTR ERVL -2475 2521 2350 669 209 1 26 chr2 208693145 208693318 -44563265 - L1ME2 LINE L1 -2 6332 6002 342 325 81 30 chr2 208693318 208693552 -44563031 - ERVL LTR ERVL -3463 2301 2056 519 307 47 0 chr2 208693687 208693879 -44562704 - ERVL LTR ERVL -3177 1819 1619 288 263 0 13 chr2 208694116 208694192 -44562391 - ERVL LTR ERVL -3773 1223 1149 463 90 0 0 chr2 208694203 208694270 -44562313 - HY4 scRNA scRNA 0 93 27 1631 290 69 35 chr2 208694275 208695045 -44561538 - ERVL LTR ERVL -3831 1165 370 1121 251 61 19 chr2 208695322 208695701 -44560882 - LTR16A LTR ERVL 0 450 56 2188 77 42 3 chr2 208696112 208696398 -44560185 - AluY SINE Alu -14 297 1 692 156 30 67 chr2 208696512 208696647 -44559936 - FLAM_A SINE Alu -3 130 1 1941 128 61 31 chr2 208696703 208697030 -44559553 - MER1B DNA MER1_type 0 337 1 186 133 0 0 chr2 208697113 208697143 -44559440 + (TA)n Simple_repeat Simple_repeat 1 30 0 273 235 15 0 chr2 208697501 208697569 -44559014 + HsTC2 DNA Tc2 1 69 -1829 3950 177 43 12 chr2 208697720 208699216 -44557367 - L1PB4 LINE L1 -53 6103 4557 1300 170 4 9 chr2 208699220 208699449 -44557134 - AluJb SINE Alu 0 312 85 1651 201 103 0 chr2 208699449 208699846 -44556737 - L1PB4 LINE L1 -1584 4562 4125 1154 209 93 36 chr2 208699986 208700373 -44556210 - MLT1C LTR MaLR 0 467 59 6848 125 4 1 chr2 208700711 208702564 -44554019 - L1PA10 LINE L1 -4 6479 4626 1573 112 17 0 chr2 208702569 208702802 -44553781 - L1PA10 LINE L1 -21 6147 5911 17571 178 32 50 chr2 208702802 208706307 -44550276 - L1PA10 LINE L1 -1815 4646 1122 222 91 0 0 chr2 208706307 208706340 -44550243 + (TTG)n Simple_repeat Simple_repeat 1 33 0 17571 178 32 50 chr2 208706340 208707432 -44549151 - L1PA10 LINE L1 -5339 1122 12 2277 81 3 10 chr2 208707971 208708268 -44548315 - AluY SINE Alu -16 295 1 6576 92 3 1 chr2 208709015 208709990 -44546593 + L1PA8 LINE L1 4083 5059 -1087 7243 57 0 1 chr2 208710102 208711237 -44545346 + L1PA8 LINE L1 5023 6165 -7 2559 7 0 3 chr2 208711491 208711773 -44544810 + AluYa5 SINE Alu 16 296 -15 245 277 225 41 chr2 208711782 208712112 -44544471 - L3b LINE CR1 -37 1546 1108 187 373 15 15 chr2 208712234 208712301 -44544282 - L2 LINE L2 -1 3271 3205 428 273 74 17 chr2 208712341 208712517 -44544066 + L1MC4a LINE L1 5712 5897 -1911 199 336 30 38 chr2 208712971 208713102 -44543481 - L2 LINE L2 -226 3046 2917 217 323 8 79 chr2 208713130 208713257 -44543326 - L2 LINE L2 -563 2751 2634 605 239 127 9 chr2 208713578 208713791 -44542792 + MER5C DNA MER1_type 9 246 -78 599 238 8 8 chr2 208714297 208714419 -44542164 - L2 LINE L2 -7 3306 3185 420 20 0 0 chr2 208716141 208716190 -44540393 + (CA)n Simple_repeat Simple_repeat 2 50 0 219 313 98 18 chr2 208718172 208718284 -44538299 + L2 LINE L2 2939 3059 -254 542 294 0 7 chr2 208718699 208718835 -44537748 - MIR SINE MIR -7 255 121 654 126 36 0 chr2 208719043 208719154 -44537429 + L1MA3 LINE L1 6191 6305 0 30 0 0 0 chr2 208719154 208719184 -44537399 + AT_rich Low_complexity Low_complexity 1 30 0 1713 169 0 14 chr2 208719184 208719468 -44537115 + AluJo SINE Alu 1 280 -32 297 0 0 0 chr2 208719468 208719501 -44537082 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 296 229 57 58 chr2 208720182 208720321 -44536262 + MIR SINE MIR 44 187 -66 742 237 68 65 chr2 208721623 208721855 -44534728 - MLT1D LTR MaLR -167 338 103 2274 119 0 6 chr2 208721855 208722166 -44534417 - AluSx SINE Alu -3 309 1 742 237 68 65 chr2 208722166 208722270 -44534313 - MLT1D LTR MaLR -402 103 1 447 238 0 63 chr2 208722282 208722425 -44534158 + HsTC2 DNA Tc2 1287 1596 -302 31 26 0 0 chr2 208722512 208722550 -44534033 + AT_rich Low_complexity Low_complexity 1 38 0 285 254 48 63 chr2 208722810 208722936 -44533647 - MLT1J LTR MaLR -64 447 324 370 297 116 40 chr2 208723034 208724696 -44531887 + L1ME LINE L1 2770 4557 -1589 2374 101 0 0 chr2 208724898 208725196 -44531387 + AluSx SINE Alu 1 298 -14 329 265 118 77 chr2 208725229 208725780 -44530803 + L1ME LINE L1 5264 5818 -303 215 192 41 27 chr2 208726522 208726595 -44529988 + (TATATG)n Simple_repeat Simple_repeat 5 78 0 1884 148 0 21 chr2 208729277 208729568 -44527015 + AluJb SINE Alu 1 285 -27 403 339 8 15 chr2 208729654 208729784 -44526799 + MIR SINE MIR 24 152 -110 229 312 129 21 chr2 208731263 208731356 -44525227 - L2 LINE L2 -54 3218 3116 21 0 0 0 chr2 208732201 208732222 -44524361 + AT_rich Low_complexity Low_complexity 1 21 0 189 293 134 37 chr2 208733057 208733139 -44523444 - L2 LINE L2 -200 3113 3024 664 256 42 12 chr2 208733203 208733371 -44523212 + MIR SINE MIR 56 228 -34 2434 259 114 11 chr2 208733371 208734277 -44522306 - MER69B DNA AcHobo 0 1226 228 611 212 133 0 chr2 208734277 208734332 -44522251 - MER45A DNA AcHobo -1403 178 132 1702 158 3 30 chr2 208734332 208734629 -44521954 + AluJb SINE Alu 2 290 -22 2250 87 40 0 chr2 208734635 208734934 -44521649 + AluY SINE Alu 1 311 0 611 212 133 0 chr2 208734934 208735022 -44521561 - MER45A DNA AcHobo -1453 128 8 681 286 17 42 chr2 208735029 208735270 -44521313 - MER69B DNA AcHobo -991 235 1 199 175 25 0 chr2 208735270 208735310 -44521273 + L2 LINE L2 3268 3308 -5 1585 171 7 36 chr2 208735905 208736179 -44520404 + AluJb SINE Alu 38 303 -9 288 70 0 0 chr2 208736409 208736452 -44520131 + (GTTTG)n Simple_repeat Simple_repeat 1 43 0 1779 169 22 0 chr2 208736452 208736730 -44519853 - AluJb SINE Alu -28 284 1 181 180 20 80 chr2 208736846 208736896 -44519687 + MIR SINE MIR 153 199 -63 1922 101 8 4 chr2 208737502 208737783 -44518800 + AluSx SINE Alu 27 308 0 1103 165 0 0 chr2 208737787 208737951 -44518632 + AluJb SINE Alu 133 296 -16 32 20 0 20 chr2 208739356 208739374 -44517209 + AT_rich Low_complexity Low_complexity 1 18 -31 1967 160 3 0 chr2 208739374 208739667 -44516916 + AluSx SINE Alu 1 294 -18 32 20 0 20 chr2 208739667 208739698 -44516885 + AT_rich Low_complexity Low_complexity 18 49 0 2997 117 5 2 chr2 208739884 208740311 -44516272 + MSTA LTR MaLR 1 428 0 938 118 6 24 chr2 208740401 208740571 -44516012 - L1MB3 LINE L1 -1 6182 6016 827 146 15 15 chr2 208741279 208741409 -44515174 - FLAM_C SINE Alu -3 130 1 2388 90 3 10 chr2 208745649 208745961 -44510622 + AluSg SINE Alu 1 310 0 192 300 0 0 chr2 208745968 208746018 -44510565 - L2 LINE L2 -20 3252 3203 21 57 0 0 chr2 208747097 208747132 -44509451 + AT_rich Low_complexity Low_complexity 1 35 0 2366 93 3 3 chr2 208747702 208748012 -44508571 + AluSg SINE Alu 1 310 0 367 202 45 0 chr2 208748609 208748698 -44507885 + L2 LINE L2 2934 3026 -287 198 171 0 0 chr2 208748812 208748847 -44507736 + MIR3 SINE MIR 123 157 -51 2213 132 0 0 chr2 208748847 208749158 -44507425 - AluSx SINE Alu -1 311 1 617 290 70 16 chr2 208749276 208749462 -44507121 - MIR SINE MIR -65 197 2 1722 163 25 3 chr2 208750115 208750440 -44506143 + L1MC1 LINE L1 5996 6327 -6 225 0 0 0 chr2 208750549 208750574 -44506009 + (TA)n Simple_repeat Simple_repeat 1 25 0 1508 179 56 4 chr2 208750591 208750859 -44505724 - AluSx SINE Alu -30 282 1 184 257 99 59 chr2 208752300 208752401 -44504182 - L3 LINE CR1 -28 1549 1445 1465 196 2 99 chr2 208752500 208752904 -44503679 + MLT1A1 LTR MaLR 1 365 0 2169 142 34 3 chr2 208754247 208754600 -44501983 + THE1B LTR MaLR 1 364 0 677 251 50 0 chr2 208754722 208754921 -44501662 + LTR33 LTR ERVL 313 521 0 192 366 0 28 chr2 208754929 208755000 -44501583 + L2 LINE L2 2957 3025 -247 492 333 21 11 chr2 208755292 208755478 -44501105 - MIR3 SINE MIR -3 205 18 3070 184 4 2 chr2 208756845 208757388 -44499195 - MER44D DNA MER2_type -6 599 1 1259 295 22 10 chr2 208757576 208757986 -44498597 - HERV16 LTR ERVL -2154 2842 2428 264 345 53 0 chr2 208758233 208758346 -44498237 + MER5C DNA MER1_type 204 322 -2 180 0 0 0 chr2 208759471 208759491 -44497092 + (A)n Simple_repeat Simple_repeat 1 20 0 291 289 37 59 chr2 208760079 208760214 -44496369 + L2 LINE L2 3182 3313 0 677 258 66 15 chr2 208761462 208761660 -44494923 + MIR SINE MIR 14 221 -41 631 218 141 0 chr2 208762027 208762183 -44494400 + MER45A DNA AcHobo 1 178 0 300 303 42 34 chr2 208765383 208765502 -44491081 - MIR SINE MIR -87 175 56 814 109 0 16 chr2 208765534 208765662 -44490921 + FRAM SINE Alu 51 176 0 284 236 45 0 chr2 208766134 208766223 -44490360 - MER103 DNA DNA -71 95 3 196 354 50 40 chr2 208766302 208766590 -44489993 + L2 LINE L2 2770 3059 -213 821 258 15 13 chr2 208766902 208767133 -44489450 - MIR SINE MIR -2 260 31 412 257 92 0 chr2 208767551 208767660 -44488923 - MIR SINE MIR -116 146 28 208 330 76 8 chr2 208768008 208768126 -44488457 + MIR3 SINE MIR 66 191 -17 1857 177 27 82 chr2 208768578 208768800 -44487783 + MLT1B LTR MaLR 1 191 -199 246 32 0 0 chr2 208768800 208768831 -44487752 + (GA)n Simple_repeat Simple_repeat 2 32 0 1857 177 27 82 chr2 208768831 208769021 -44487562 + MLT1B LTR MaLR 191 390 0 289 241 181 35 chr2 208769198 208769314 -44487269 + L2 LINE L2 3159 3291 -22 728 255 166 14 chr2 208769343 208769692 -44486891 - L1ME4a LINE L1 -241 5880 5479 1235 161 189 28 chr2 208769827 208770081 -44486502 + AluSg SINE Alu 1 295 -5 541 308 138 1 chr2 208770746 208770942 -44485641 - MIR SINE MIR -40 222 4 642 164 27 0 chr2 208772150 208772260 -44484323 - L1MB4 LINE L1 0 6180 6068 24 53 0 0 chr2 208772557 208772595 -44483988 + AT_rich Low_complexity Low_complexity 1 38 0 800 167 7 21 chr2 208772646 208772790 -44483793 + FLAM_C SINE Alu 2 143 0 817 188 0 0 chr2 208772794 208772927 -44483656 - MER3 DNA MER1_type -76 133 1 2089 109 3 35 chr2 208773469 208773780 -44482803 - AluSg SINE Alu -9 301 1 2078 136 7 0 chr2 208773783 208774084 -44482499 - AluSx SINE Alu -9 303 1 10215 87 26 36 chr2 208774226 208774442 -44482141 - Tigger1 DNA MER2_type 0 2418 2201 1838 171 0 3 chr2 208774442 208774740 -44481843 + AluJb SINE Alu 1 297 -15 10215 87 26 36 chr2 208774740 208775173 -44481410 - Tigger1 DNA MER2_type -217 2201 1765 1759 157 11 3 chr2 208775173 208775460 -44481123 - AluSx SINE Alu -13 299 11 10215 87 26 36 chr2 208775460 208776299 -44480284 - Tigger1 DNA MER2_type -653 1765 944 941 112 8 0 chr2 208776310 208776435 -44480148 - FLAM_C SINE Alu -17 126 1 5753 119 36 28 chr2 208776436 208777177 -44479406 - Tigger1 DNA MER2_type -1466 952 201 2128 154 0 0 chr2 208777177 208777489 -44479094 + AluJb SINE Alu 1 312 0 5753 119 36 28 chr2 208777489 208777645 -44478938 - Tigger1 DNA MER2_type -2217 201 48 2363 184 47 2 chr2 208777764 208778172 -44478411 + MSTB LTR MaLR 1 426 0 343 324 7 36 chr2 208778610 208778749 -44477834 + MIR SINE MIR 12 146 -116 2077 130 7 0 chr2 208778833 208779126 -44477457 + AluSx SINE Alu 1 295 -17 258 267 17 0 chr2 208779127 208779187 -44477396 + L1MC5 LINE L1 7037 7097 -864 1113 169 22 0 chr2 208779729 208779913 -44476670 + AluJb SINE Alu 104 291 -21 365 296 216 6 chr2 208779913 208780089 -44476494 - LTR16C LTR ERVL -100 391 179 24 0 0 0 chr2 208780855 208780879 -44475704 + AT_rich Low_complexity Low_complexity 1 24 0 5990 251 92 45 chr2 208781505 208783591 -44472992 + HAL1 LINE L1 1 2216 -291 215 93 23 0 chr2 208783591 208783634 -44472949 + (TG)n Simple_repeat Simple_repeat 2 45 0 5990 251 92 45 chr2 208783634 208783940 -44472643 + HAL1 LINE L1 2216 2506 -1 180 148 19 37 chr2 208783941 208783995 -44472588 + GA-rich Low_complexity Low_complexity 4 56 0 1773 188 7 0 chr2 208784011 208784304 -44472279 + AluJb SINE Alu 1 295 -17 1045 136 7 0 chr2 208784374 208784554 -44472029 + AluSg/x SINE Alu 130 310 0 462 212 51 0 chr2 208784646 208784764 -44471819 - HAL1 LINE L1 -307 2200 2077 492 308 65 82 chr2 208784870 208785117 -44471466 + L2 LINE L2 2549 2788 -526 2050 134 0 38 chr2 208785117 208785430 -44471153 + AluSx SINE Alu 1 301 -11 492 308 65 82 chr2 208785430 208785598 -44470985 + L2 LINE L2 2788 2957 -357 23 33 0 0 chr2 208786079 208786109 -44470474 + AT_rich Low_complexity Low_complexity 1 30 0 894 151 0 0 chr2 208788061 208788187 -44468396 - FLAM_C SINE Alu -3 130 5 1903 148 0 17 chr2 208788425 208788723 -44467860 + AluSx SINE Alu 1 293 -19 206 304 54 45 chr2 208791401 208791513 -44465070 + MIR SINE MIR 46 158 -104 254 258 15 0 chr2 208793006 208793072 -44463511 - L2 LINE L2 -4 3309 3243 346 300 65 103 chr2 208793932 208794299 -44462284 - L1M2 LINE L1 -5840 1009 657 37 39 0 0 chr2 208794888 208794939 -44461644 + AT_rich Low_complexity Low_complexity 1 51 0 21 36 0 0 chr2 208795397 208795425 -44461158 + AT_rich Low_complexity Low_complexity 1 28 0 689 193 130 19 chr2 208796644 208796805 -44459778 + MER96B DNA MER1_type? 1 179 -238 2175 119 0 3 chr2 208797088 208797382 -44459201 + AluSx SINE Alu 1 293 -19 2506 80 0 3 chr2 208797383 208797695 -44458888 + AluY SINE Alu 1 311 0 1578 149 12 119 chr2 208799532 208799860 -44456723 - AluJo SINE Alu -9 293 1 229 143 95 0 chr2 208799969 208800011 -44456572 - MIR3 SINE MIR -22 186 141 840 142 35 14 chr2 208800046 208800187 -44456396 + AluJb SINE Alu 147 290 -22 1330 131 5 45 chr2 208800486 208800707 -44455876 + AluJo SINE Alu 2 213 -99 1125 163 5 5 chr2 208801418 208801602 -44454981 + AluJb SINE Alu 129 312 0 1840 162 3 14 chr2 208802562 208802858 -44453725 - AluJo SINE Alu -13 299 7 2075 147 22 64 chr2 208803371 208803778 -44452805 - MLT1B LTR MaLR 0 390 1 1830 171 3 10 chr2 208804485 208804784 -44451799 + AluJb SINE Alu 3 299 -13 362 281 76 58 chr2 208804788 208804959 -44451624 + MIR SINE MIR 35 208 -54 202 260 104 0 chr2 208805220 208805297 -44451286 + MIR SINE MIR 106 190 -72 21 0 0 0 chr2 208805954 208805975 -44450608 + AT_rich Low_complexity Low_complexity 1 21 0 541 269 74 36 chr2 208806187 208806474 -44450109 - L1ME2 LINE L1 -224 5897 5601 24 0 0 0 chr2 208808425 208808449 -44448134 + AT_rich Low_complexity Low_complexity 1 24 0 189 326 90 0 chr2 208809981 208810070 -44446513 - MIR SINE MIR -13 249 153 271 259 78 38 chr2 208810096 208810694 -44445889 - L1MC4 LINE L1 -113 7929 7261 1811 153 7 27 chr2 208811936 208812230 -44444353 + AluSx SINE Alu 1 288 -24 180 0 0 0 chr2 208812241 208812261 -44444322 + (CAT)n Simple_repeat Simple_repeat 2 21 0 2469 65 0 0 chr2 208812624 208812918 -44443665 - AluY SINE Alu -16 295 2 234 62 0 0 chr2 208813748 208813780 -44442803 + (TC)n Simple_repeat Simple_repeat 1 32 0 * 1291 112 6 6 chr2 208813779 208813959 -44442624 - AluSq SINE Alu -135 178 1 194 302 111 0 chr2 208814366 208814429 -44442154 + L3 LINE CR1 1467 1536 -41 1437 148 171 0 chr2 208814928 208815185 -44441398 + AluJo SINE Alu 2 302 0 23 0 0 0 chr2 208815439 208815462 -44441121 + AT_rich Low_complexity Low_complexity 1 23 0 42 0 0 35 chr2 208815590 208815630 -44440953 + AT_rich Low_complexity Low_complexity 1 40 -15 1490 160 75 8 chr2 208815630 208815898 -44440685 - AluJo SINE Alu -26 286 1 42 0 0 35 chr2 208815898 208815914 -44440669 + AT_rich Low_complexity Low_complexity 40 55 0 595 323 97 36 chr2 208816262 208816620 -44439963 + LTR16A LTR ERVL 6 394 -56 2458 62 0 3 chr2 208816620 208816926 -44439657 - AluY SINE Alu -6 305 1 595 323 97 36 chr2 208816926 208816979 -44439604 + LTR16A LTR ERVL 394 442 -8 2198 92 17 0 chr2 208817423 208817716 -44438867 - AluSp SINE Alu -15 298 1 785 258 37 0 chr2 208817990 208818180 -44438403 - MIR SINE MIR -2 260 64 701 295 22 22 chr2 208820579 208820803 -44435780 + MIR SINE MIR 25 248 -14 2171 139 0 0 chr2 208822370 208822679 -44433904 + AluSx SINE Alu 1 309 -3 597 175 8 0 chr2 208823314 208823434 -44433149 - L1MC4 LINE L1 0 8042 7922 21 36 0 0 chr2 208823458 208823486 -44433097 + AT_rich Low_complexity Low_complexity 1 28 0 1800 222 38 38 chr2 208823491 208823636 -44432947 - L1MC4 LINE L1 -139 7903 7759 1832 140 13 44 chr2 208823636 208823951 -44432632 + AluSx SINE Alu 1 305 -7 1800 222 38 38 chr2 208823951 208824305 -44432278 - L1MC4 LINE L1 -282 7760 7404 1177 224 234 55 chr2 208824306 208824993 -44431590 - L1MC4 LINE L1 -851 7191 6380 4789 148 29 37 chr2 208825011 208825841 -44430742 + MER6 DNA MER2_type 43 865 0 347 229 169 84 chr2 208825841 208826090 -44430493 - L1MC4a LINE L1 -1426 6382 6113 1363 246 121 38 chr2 208826095 208826295 -44430288 - L1MC4a LINE L1 -1743 6065 5883 2510 61 0 3 chr2 208826295 208826592 -44429991 + AluY SINE Alu 1 296 -15 1363 246 121 38 chr2 208826592 208826976 -44429607 - L1MC4a LINE L1 -1925 5883 5432 402 298 158 15 chr2 208827254 208827347 -44429236 - L1MC4a LINE L1 -1112 5034 4956 1624 145 10 40 chr2 208827347 208827479 -44429104 + L1MC1 LINE L1 6035 6169 -164 2227 112 0 3 chr2 208827479 208827783 -44428800 + AluSq SINE Alu 1 303 -10 1624 145 10 40 chr2 208827783 208827953 -44428630 + L1MC1 LINE L1 6169 6328 -5 402 298 158 15 chr2 208827953 208828124 -44428459 - L1MC4a LINE L1 -1190 4956 4732 1981 119 7 3 chr2 208828548 208828841 -44427742 - AluJb SINE Alu -18 294 1 2146 58 38 17 chr2 208828872 208829165 -44427418 - AluSq SINE Alu -14 299 1 315 290 81 93 chr2 208830020 208830566 -44426017 + L1M2 LINE L1 676 1216 -5635 1010 147 6 0 chr2 208830856 208831012 -44425571 + FRAM SINE Alu 1 157 -19 321 170 0 0 chr2 208831066 208831119 -44425464 + L2 LINE L2 3261 3313 0 2163 98 24 0 chr2 208831559 208831856 -44424727 + AluSg SINE Alu 1 304 -6 22 0 0 0 chr2 208832117 208832139 -44424444 + AT_rich Low_complexity Low_complexity 1 22 0 1406 164 22 61 chr2 208832559 208832870 -44423713 - MLT1B LTR MaLR -91 299 1 391 296 28 80 chr2 208832929 208833105 -44423478 + L2 LINE L2 3010 3176 -96 241 360 79 0 chr2 208834776 208834865 -44421718 - L3 LINE CR1 -3 1574 1479 2062 112 45 9 chr2 208834892 208835222 -44421361 - MER2 DNA MER2_type -1 343 2 277 195 0 0 chr2 208835619 208835660 -44420923 + Alu SINE Alu 1 41 -260 745 154 0 0 chr2 208835760 208835883 -44420700 + AluSg/x SINE Alu 184 306 -6 733 265 79 71 chr2 208836531 208837063 -44419520 - MLT1H LTR MaLR 0 549 14 22 35 0 0 chr2 208837292 208837321 -44419262 + AT_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr2 208837490 208837525 -44419058 + AT_rich Low_complexity Low_complexity 1 35 0 1499 161 51 11 chr2 208838546 208838820 -44417763 - AluJo SINE Alu -27 285 1 2145 105 7 14 chr2 208838882 208839176 -44417407 - AluSx SINE Alu -20 292 1 645 298 110 22 chr2 208839337 208839847 -44416736 + L1MEc LINE L1 1162 1716 -4680 379 147 44 0 chr2 208839846 208839914 -44416669 + L1M4 LINE L1 4798 4868 -1278 * 871 183 47 6 chr2 208839917 208840086 -44416497 + AluJb SINE Alu 132 307 -5 694 240 101 38 chr2 208840086 208840432 -44416151 + L1M4 LINE L1 4867 5234 -912 363 243 171 18 chr2 208843413 208843524 -44413059 - L1MEc LINE L1 -5333 1063 970 1720 174 7 0 chr2 208843524 208843828 -44412755 - AluJb SINE Alu 0 306 1 363 243 171 18 chr2 208843828 208843937 -44412646 - L1MEc LINE L1 -5426 970 808 745 154 8 0 chr2 208843945 208844062 -44412521 - FLAM_C SINE Alu -25 118 1 914 311 49 51 chr2 208844064 208844882 -44411701 - L1MEc LINE L1 -5573 823 8 2118 78 23 43 chr2 208844883 208845229 -44411354 - L1MA2 LINE L1 0 6304 5966 188 378 37 0 chr2 208845540 208845622 -44410961 + L2 LINE L2 3174 3258 -14 453 130 13 0 chr2 208845991 208846068 -44410515 - MLT2D LTR ERVL -290 124 47 759 263 147 84 chr2 208846075 208846669 -44409914 - L1MC4 LINE L1 -152 7890 7260 2016 159 124 25 chr2 208846678 208847113 -44409470 + MLT1D LTR MaLR 28 505 0 856 246 73 78 chr2 208847116 208847258 -44409325 - L1MC4 LINE L1 -827 7215 7074 836 228 6 0 chr2 208847258 208847416 -44409167 - FRAM SINE Alu -7 159 1 856 246 73 78 chr2 208847416 208847736 -44408847 - L1MC4 LINE L1 -968 7074 6755 548 234 119 100 chr2 208847831 208848092 -44408491 + L2 LINE L2 3048 3313 0 639 236 52 35 chr2 208848589 208848654 -44407929 - MLT1I LTR MaLR 0 409 347 342 0 0 0 chr2 208848654 208848692 -44407891 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 639 236 52 35 chr2 208848692 208848800 -44407783 - MLT1I LTR MaLR -62 347 233 505 200 19 9 chr2 208848870 208848975 -44407608 - MLT1I LTR MaLR -303 106 1 637 195 0 49 chr2 208849243 208849366 -44407217 + FLAM_A SINE Alu 4 120 -13 1132 263 31 67 chr2 208849544 208850023 -44406560 - MLT1J LTR MaLR -24 487 26 1698 164 27 17 chr2 208850182 208850357 -44406226 - AluJb SINE Alu -16 296 115 189 0 0 0 chr2 208850357 208850378 -44406205 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 1698 164 27 17 chr2 208850378 208850495 -44406088 - AluJb SINE Alu -197 115 1 7097 118 11 22 chr2 208850531 208852061 -44404522 - L1MA3 LINE L1 0 6305 4786 352 235 113 17 chr2 208852899 208853014 -44403569 - L2 LINE L2 -140 3173 3048 880 247 71 74 chr2 208853109 208853428 -44403155 + L1MC4 LINE L1 6755 7074 -968 836 228 6 0 chr2 208853428 208853586 -44402997 + FRAM SINE Alu 1 159 -7 880 247 71 74 chr2 208853586 208853728 -44402855 + L1MC4 LINE L1 7074 7215 -827 2016 159 124 25 chr2 208853731 208854166 -44402417 - MLT1D LTR MaLR 0 505 28 759 263 147 84 chr2 208854175 208854769 -44401814 + L1MC4 LINE L1 7260 7890 -152 453 130 13 0 chr2 208854776 208854853 -44401730 + MLT2D LTR ERVL 47 124 -290 2076 81 26 43 chr2 208855590 208855935 -44400648 + L1MA2 LINE L1 5966 6304 0 889 315 49 50 chr2 208855936 208856753 -44399830 + L1MEc LINE L1 8 823 -5573 766 145 8 0 chr2 208856755 208856872 -44399711 + FLAM_C SINE Alu 1 118 -25 363 243 171 18 chr2 208856880 208856989 -44399594 + L1MEc LINE L1 808 899 -5497 1721 174 7 0 chr2 208856989 208857293 -44399290 + AluJb SINE Alu 1 306 0 363 243 171 18 chr2 208857293 208857404 -44399179 + L1MEc LINE L1 899 1063 -5333 28 0 0 0 chr2 208859933 208859961 -44396622 + AT_rich Low_complexity Low_complexity 1 28 0 371 311 112 62 chr2 208862153 208862591 -44393992 - MLT1L LTR MaLR -36 579 120 365 280 77 35 chr2 208862712 208862855 -44393728 - MER5B DNA MER1_type -29 149 1 22 0 0 0 chr2 208862976 208862998 -44393585 + AT_rich Low_complexity Low_complexity 1 22 0 194 233 33 33 chr2 208863723 208863783 -44392800 + MIR SINE MIR 82 141 -67 23 0 0 0 chr2 208863901 208863924 -44392659 + AT_rich Low_complexity Low_complexity 1 23 0 196 308 19 0 chr2 208864113 208864165 -44392418 - L3 LINE CR1 -4 1573 1521 1025 92 23 0 chr2 208864419 208864550 -44392033 + AluSc SINE Alu 1 134 -175 1882 123 0 4 chr2 208864791 208865051 -44391532 + AluJb SINE Alu 47 305 -7 687 180 8 0 chr2 208865068 208865190 -44391393 + FLAM_C SINE Alu 5 127 -6 1329 31 0 6 chr2 208865672 208865835 -44390748 - L1PA5 LINE L1 -2 6152 5991 1044 152 66 0 chr2 208866452 208866649 -44389934 + MER6B DNA MER2_type 1 210 0 24 32 0 0 chr2 208867123 208867154 -44389429 + AT_rich Low_complexity Low_complexity 1 31 0 891 206 42 0 chr2 208868358 208868523 -44388060 - FAM SINE Alu -3 172 1 349 225 67 33 chr2 208870425 208870545 -44386038 - L1ME LINE L1 -387 5734 5611 1586 209 17 0 chr2 208870606 208870893 -44385690 - AluJb SINE Alu -20 292 1 349 195 0 35 chr2 208871092 208871179 -44385404 - L2 LINE L2 -72 3241 3158 1880 152 26 5 chr2 208871183 208871565 -44385018 - Charlie5 DNA MER1_type 0 2624 2235 387 172 0 142 chr2 208871566 208871715 -44384868 - Charlie5 DNA MER1_type -2487 125 1 1235 279 127 18 chr2 208871746 208872361 -44384222 - L2 LINE L2 -152 3161 2469 302 270 61 9 chr2 208872400 208872515 -44384068 + L1ME1 LINE L1 5581 5701 -2107 1640 177 29 23 chr2 208872625 208872935 -44383648 + AluJb SINE Alu 1 312 0 207 0 0 0 chr2 208872964 208872987 -44383596 + (TA)n Simple_repeat Simple_repeat 1 23 0 819 162 46 28 chr2 208874033 208874335 -44382248 + MSTD LTR MaLR 1 346 -50 1339 204 80 19 chr2 208874507 208874609 -44381974 + L1ME1 LINE L1 5723 5817 -349 1954 155 0 10 chr2 208874609 208874918 -44381665 + AluJb SINE Alu 1 306 -6 1339 204 80 19 chr2 208874918 208875188 -44381395 + L1ME1 LINE L1 5817 6118 -48 2255 94 0 0 chr2 208875202 208875488 -44381095 + AluSx SINE Alu 1 286 -26 2328 109 48 6 chr2 208875677 208876035 -44380548 + THE1C LTR MaLR 3 375 0 8957 104 97 6 chr2 208876035 208877482 -44379101 + THE1C-int LTR MaLR 1 1580 0 2453 111 25 5 chr2 208877482 208877850 -44378733 + THE1C LTR MaLR 1 375 0 2321 91 0 32 chr2 208878047 208878356 -44378227 + AluSx SINE Alu 1 299 -13 217 305 63 32 chr2 208878359 208878454 -44378129 + L3 LINE CR1 588 685 -892 670 167 114 0 chr2 208878455 208878569 -44378014 + FLAM_C SINE Alu 1 127 -16 218 289 141 15 chr2 208878608 208878743 -44377840 + L3 LINE CR1 750 901 -676 1126 257 260 38 chr2 208878875 208879775 -44376808 - L2 LINE L2 -109 3204 2086 481 242 108 38 chr2 208879785 208879942 -44376641 - MIR SINE MIR -63 199 32 210 80 60 20 chr2 208880288 208880338 -44376245 + (TA)n Simple_repeat Simple_repeat 2 53 0 411 108 34 40 chr2 208880343 208880519 -44376064 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 396 37 116 18 chr2 208880539 208880703 -44375880 + (TA)n Simple_repeat Simple_repeat 1 180 0 2294 109 0 0 chr2 208880923 208881225 -44375358 + AluSx SINE Alu 1 302 -10 861 167 64 69 chr2 208881251 208881455 -44375128 + MER3 DNA MER1_type 6 208 -1 24 32 0 0 chr2 208882521 208882552 -44374031 + GC_rich Low_complexity Low_complexity 1 31 0 1622 137 30 50 chr2 208883262 208883562 -44373021 + AluJo SINE Alu 15 308 -4 287 207 69 0 chr2 208883652 208883710 -44372873 - MIR SINE MIR -4 258 197 2091 133 0 16 chr2 208884194 208884503 -44372080 - AluSx SINE Alu -8 304 1 627 278 58 85 chr2 208885223 208885565 -44371018 - MER102b DNA MER1_type -7 334 2 2334 100 0 0 chr2 208885637 208885936 -44370647 + AluSx SINE Alu 3 301 -11 5827 198 60 22 chr2 208886511 208886537 -44370046 + L1MB8 LINE L1 3731 3755 -2423 1916 121 82 28 chr2 208886537 208886893 -44369690 + THE1C LTR MaLR 1 375 0 5827 198 60 22 chr2 208886893 208888328 -44368255 + L1MB8 LINE L1 3755 5290 -888 2149 173 58 7 chr2 208888328 208888739 -44367844 - MSTB1 LTR MaLR 0 432 1 5827 198 60 22 chr2 208888739 208889288 -44367295 + L1MB8 LINE L1 5290 5817 -361 854 129 0 0 chr2 208889319 208889435 -44367148 + FLAM_C SINE Alu 3 118 -25 763 181 33 16 chr2 208889443 208889625 -44366958 + L1MB8 LINE L1 5817 6001 -177 379 148 66 148 chr2 208889628 208889750 -44366833 - MLT1F1 LTR MaLR -455 112 1 2306 65 7 33 chr2 208889835 208890142 -44366441 + AluSg SINE Alu 8 306 -4 458 365 12 6 chr2 208890222 208890392 -44366191 - L2 LINE L2 -536 2778 2608 1152 260 81 42 chr2 208890421 208890932 -44365651 - MLT1H LTR MaLR -16 574 1 1223 231 45 44 chr2 208891028 208891483 -44365100 + MER39 LTR ERV1 250 565 0 1805 166 10 23 chr2 208892149 208892457 -44364126 - AluJb SINE Alu -8 304 1 2052 164 7 0 chr2 208892487 208892791 -44363792 + 7SLRNA srpRNA srpRNA 2 307 -13 1404 179 4 0 chr2 208893197 208893454 -44363129 + L1MDa LINE L1 25 282 -6258 1561 169 62 7 chr2 208893490 208893763 -44362820 + AluSx SINE Alu 1 288 -24 328 197 0 0 chr2 208893775 208893836 -44362747 + AluJ/FLAM SINE Alu 2 62 -240 300 64 64 0 chr2 208893862 208893909 -44362674 - MADE1 DNA Mariner -24 56 7 4266 173 32 3 chr2 208893918 208894815 -44361768 - L1MC2 LINE L1 -232 6112 5189 631 148 56 0 chr2 208894845 208894953 -44361630 - FLAM_C SINE Alu -29 114 1 1520 217 20 10 chr2 208894954 208895355 -44361228 - L1MC2 LINE L1 -946 5200 4796 353 84 0 0 chr2 208895381 208895441 -44361142 - Alu SINE Alu -256 46 1 602 203 5 78 chr2 208895980 208896172 -44360411 - MER97c DNA MER1_type? -912 178 1 2465 84 0 0 chr2 208896234 208896545 -44360038 + AluY SINE Alu 1 311 0 239 313 190 11 chr2 208896582 208896761 -44359822 + MIR SINE MIR 46 256 -6 634 283 100 58 chr2 208896771 208897301 -44359282 + LTR67 LTR ERVL 2 553 -4 1891 145 14 10 chr2 208897657 208897953 -44358630 - AluSx SINE Alu -8 304 8 180 300 144 0 chr2 208898454 208898544 -44358039 - MIR SINE MIR -41 221 119 31 82 0 0 chr2 208898653 208898726 -44357857 + AT_rich Low_complexity Low_complexity 1 73 0 296 283 88 83 chr2 208900384 208900589 -44355994 + L2 LINE L2 223 428 -2886 22 35 0 0 chr2 208900590 208900619 -44355964 + AT_rich Low_complexity Low_complexity 1 29 0 2377 102 0 16 chr2 208900810 208901125 -44355458 - AluSx SINE Alu -2 310 1 27461 91 11 6 chr2 208901128 208906110 -44350473 - L1PA7 LINE L1 0 6154 1156 775 337 97 20 chr2 208906118 208906727 -44349856 + L2 LINE L2 436 1091 -2223 398 265 27 55 chr2 208907154 208907373 -44349210 - L1MC4a LINE L1 -1895 5913 5701 1154 288 129 105 chr2 208907443 208908315 -44348268 + L2 LINE L2 1207 2057 -1257 1839 161 17 7 chr2 208908315 208908614 -44347969 - AluJb SINE Alu -10 302 1 1154 288 129 105 chr2 208908614 208908686 -44347897 + L2 LINE L2 2057 2126 -1188 1734 147 41 38 chr2 208908686 208908979 -44347604 - AluJo SINE Alu -18 294 1 1154 288 129 105 chr2 208908979 208909259 -44347324 + L2 LINE L2 2126 2461 -853 436 298 114 14 chr2 208909263 208909557 -44347026 + L2 LINE L2 2762 3086 -227 2616 87 22 0 chr2 208909687 208910043 -44346540 - THE1B LTR MaLR 0 364 1 1521 274 74 12 chr2 208910972 208911487 -44345096 + MLT1H1 LTR MaLR 1 547 -8 245 209 15 0 chr2 208911650 208911717 -44344866 + (TA)n Simple_repeat Simple_repeat 2 69 0 1789 195 3 0 chr2 208911828 208912125 -44344458 - AluJb SINE Alu -14 298 1 834 293 28 43 chr2 208912591 208912983 -44343600 + L1ME3A LINE L1 5535 5945 -217 1673 199 3 0 chr2 208913241 208913537 -44343046 - AluJo SINE Alu -14 298 2 2467 89 3 3 chr2 208913580 208913893 -44342690 + AluSq SINE Alu 1 313 0 301 186 12 12 chr2 208913895 208913981 -44342602 + (TA)n Simple_repeat Simple_repeat 2 87 0 361 246 8 41 chr2 208913994 208914116 -44342467 + LTR38B LTR ERV1 1 118 -492 279 281 51 77 chr2 208914377 208914690 -44341893 + LTR36 LTR ERV1 307 611 0 22 56 0 0 chr2 208914698 208914734 -44341849 + AT_rich Low_complexity Low_complexity 1 36 0 1848 167 101 107 chr2 208914957 208915713 -44340870 + LTR1B LTR ERV1 1 751 -75 21 0 0 0 chr2 208916205 208916226 -44340357 + AT_rich Low_complexity Low_complexity 1 21 0 2486 49 0 10 chr2 208917015 208917320 -44339263 - AluY SINE Alu -9 302 1 208 313 83 21 chr2 208917443 208917539 -44339044 + MER5A DNA MER1_type 82 183 -6 488 139 89 0 chr2 208917656 208917735 -44338848 - LTR23 LTR ERV1 -278 159 74 2071 109 0 61 chr2 208917740 208918052 -44338531 - AluSq SINE Alu -20 293 1 1656 113 57 40 chr2 208918054 208918354 -44338229 - LTR23 LTR ERV1 -132 305 1 307 254 0 0 chr2 208918389 208918452 -44338131 + MER39 LTR ERV1 5 67 -640 671 176 63 28 chr2 208918486 208918628 -44337955 + LTR29 LTR ERV1 137 283 -339 942 218 48 24 chr2 208918647 208918899 -44337684 + LTR48B LTR ERV1 387 644 0 375 182 20 50 chr2 208918917 208919016 -44337567 + LTR37A LTR ERV1 14 109 -317 1196 244 23 106 chr2 208919391 208919863 -44336720 - LTR8 LTR ERV1 -8 683 251 1086 164 52 74 chr2 208919933 208920065 -44336518 - LTR8 LTR ERV1 -434 257 193 895 138 0 36 chr2 208920065 208920225 -44336358 - FLAM_C SINE Alu 0 133 1 1086 164 52 74 chr2 208920225 208920404 -44336179 - LTR8 LTR ERV1 -498 193 12 433 171 0 51 chr2 208920424 208920541 -44336042 + LOR1-int LTR ERV1 1201 1311 -3625 2201 104 0 14 chr2 208920608 208920905 -44335678 + AluSc SINE Alu 1 293 -16 302 151 27 55 chr2 208920934 208921007 -44335576 + LOR1-int LTR ERV1 1198 1268 -6852 23 33 0 0 chr2 208921104 208921134 -44335449 + AT_rich Low_complexity Low_complexity 1 30 0 331 233 95 37 chr2 208921172 208921361 -44335222 + LOR1-int LTR ERV1 1666 1865 -3071 2593 55 0 3 chr2 208922018 208922330 -44334253 + AluY SINE Alu 1 311 0 388 232 0 0 chr2 208922418 208922487 -44334096 - Tigger2 DNA MER2_type -10 2708 2640 34 55 0 14 chr2 208922487 208922507 -44334076 + AT_rich Low_complexity Low_complexity 1 20 -52 1650 138 75 4 chr2 208922507 208922775 -44333808 - AluJb SINE Alu -25 287 1 34 55 0 14 chr2 208922775 208922827 -44333756 + AT_rich Low_complexity Low_complexity 20 72 0 300 212 0 0 chr2 208924408 208924474 -44332109 + GA-rich Low_complexity Low_complexity 2 67 0 229 309 0 0 chr2 208926635 208926690 -44329893 + L2 LINE L2 3209 3263 -50 1628 160 36 4 chr2 208927347 208927474 -44329109 + AluJb SINE Alu 1 122 -190 297 0 0 0 chr2 208927474 208927507 -44329076 + (CA)n Simple_repeat Simple_repeat 2 34 0 1628 160 36 4 chr2 208927507 208927660 -44328923 + AluJb SINE Alu 122 290 -22 233 89 22 0 chr2 208927667 208927712 -44328871 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 656 283 38 5 chr2 208930776 208930960 -44325623 - MIR3 SINE MIR -3 205 16 1274 117 18 58 chr2 208932880 208933103 -44323480 + MER20 DNA MER1_type 1 214 -5 240 321 12 0 chr2 208933110 208933194 -44323389 + (TTCA)n Simple_repeat Simple_repeat 1 85 0 217 284 12 37 chr2 208933208 208933275 -44323308 - L2 LINE L2 0 3272 3206 1464 199 18 0 chr2 208933275 208933561 -44323022 + AluJo SINE Alu 13 303 -9 217 284 12 37 chr2 208933561 208933574 -44323009 - L2 LINE L2 -66 3206 3194 1858 135 6 50 chr2 208933989 208934308 -44322275 + AluSx SINE Alu 5 309 -3 2435 92 0 0 chr2 208934659 208934965 -44321618 + AluSc SINE Alu 1 306 -3 21 0 0 0 chr2 208935020 208935041 -44321542 + AT_rich Low_complexity Low_complexity 1 21 0 2451 59 0 16 chr2 208935235 208935541 -44321042 + AluY SINE Alu 1 301 -10 1324 131 5 50 chr2 208936252 208936474 -44320109 - AluJo SINE Alu -99 213 2 860 167 40 20 chr2 208936773 208936923 -44319660 - AluJb SINE Alu -22 290 138 229 143 95 0 chr2 208936949 208936991 -44319592 + MIR3 SINE MIR 141 186 -22 744 286 6 0 chr2 208937105 208937273 -44319310 + AluJo SINE Alu 6 174 -138 440 182 0 26 chr2 208937270 208937347 -44319236 + AluSc SINE Alu 131 205 -104 * 388 304 59 30 chr2 208937623 208937758 -44318825 - MIR3 SINE MIR -67 141 3 300 350 31 44 chr2 208937842 208938002 -44318581 + L3 LINE CR1 1404 1561 -16 239 315 146 31 chr2 208938025 208938155 -44318428 - MIR3 SINE MIR -27 181 37 980 283 65 50 chr2 208938580 208939043 -44317540 - MLT1J LTR MaLR -41 470 1 293 302 115 64 chr2 208939655 208940124 -44316459 + L2 LINE L2 2705 3258 -55 270 106 0 0 chr2 208940291 208940338 -44316245 + (TC)n Simple_repeat Simple_repeat 2 48 0 474 18 0 0 chr2 208940369 208940424 -44316159 + (CA)n Simple_repeat Simple_repeat 2 56 0 1455 191 80 9 chr2 208940468 208940811 -44315772 - MLT2D LTR ERVL -48 472 11 650 318 79 24 chr2 208941063 208941393 -44315190 + L2 LINE L2 2850 3197 -116 854 241 84 5 chr2 208941457 208941660 -44314923 - MER20 DNA MER1_type 0 219 1 667 214 78 91 chr2 208941722 208941965 -44314618 - MIR SINE MIR 0 262 23 387 215 89 70 chr2 208942075 208942233 -44314350 + MIR SINE MIR 85 245 -17 1595 171 131 28 chr2 208942741 208943191 -44313392 + Charlie4a DNA MER1_type 1 493 -15 4939 215 18 22 chr2 208943365 208944451 -44312132 + L1PB1 LINE L1 5068 6151 0 1387 213 116 44 chr2 208945296 208945728 -44310855 + MLT1C LTR MaLR 3 465 -2 199 258 30 15 chr2 208946884 208946950 -44309633 + MIR SINE MIR 53 119 -89 333 256 197 0 chr2 208947478 208947595 -44308988 + MIR SINE MIR 99 238 -24 356 269 296 5 chr2 208947612 208947798 -44308785 + MIR SINE MIR 2 241 -21 273 191 15 44 chr2 208948193 208948261 -44308322 + LTR50 LTR ERVL 224 289 -506 521 200 200 39 chr2 208948313 208948518 -44308065 + LTR50 LTR ERVL 543 780 -15 293 161 0 0 chr2 208948735 208948791 -44307792 - L1MC4 LINE L1 -1335 6707 6652 189 279 0 0 chr2 208949033 208949076 -44307507 + MIR SINE MIR 220 262 0 235 356 126 31 chr2 208949274 208949496 -44307087 - L2 LINE L2 -78 3194 2952 1383 148 19 9 chr2 208951595 208951811 -44304772 + MER20 DNA MER1_type 1 218 -1 191 313 62 0 chr2 208952095 208952159 -44304424 - L2 LINE L2 0 3272 3205 459 87 0 0 chr2 208952841 208952910 -44303673 + (CA)n Simple_repeat Simple_repeat 2 70 0 2124 156 17 20 chr2 208952910 208953256 -44303327 + MER7A DNA MER2_type 3 345 -1 1970 148 3 13 chr2 208953667 208953972 -44302611 - AluJo SINE Alu -10 302 1 22 0 0 0 chr2 208953988 208954010 -44302573 + AT_rich Low_complexity Low_complexity 1 22 0 647 295 82 58 chr2 208954478 208955060 -44301523 - L2 LINE L2 0 3313 2713 654 273 139 45 chr2 208955066 208955484 -44301099 - L2 LINE L2 -1379 1935 1479 501 313 68 31 chr2 208956188 208956380 -44300203 - MIR SINE MIR -39 223 25 1188 251 38 74 chr2 208957262 208957493 -44299090 + MLT1J LTR MaLR 1 212 -299 2606 138 20 12 chr2 208957493 208957893 -44298690 + MER57A LTR ERV1 1 403 0 1188 251 38 74 chr2 208957893 208958080 -44298503 + MLT1J LTR MaLR 212 404 -107 194 315 22 11 chr2 208958403 208958495 -44298088 + L2 LINE L2 2283 2375 -939 1538 254 4 23 chr2 208958496 208959050 -44297533 + MER115 DNA AcHobo 1 669 -24 182 246 98 0 chr2 208959546 208959607 -44296976 + MER5B DNA MER1_type 100 166 -12 1013 258 43 9 chr2 208960046 208960563 -44296020 + MER115 DNA AcHobo 105 687 -6 549 255 36 47 chr2 208961438 208961630 -44294953 - MLT1H LTR MaLR -1 548 359 3291 237 26 7 chr2 208962602 208963371 -44293212 + MER20B DNA MER1_type 1 784 0 265 257 40 0 chr2 208965135 208965209 -44291374 + MLT1K LTR MaLR 510 586 -2 595 249 127 30 chr2 208966863 208967060 -44289523 - MIR SINE MIR -7 255 40 3080 214 38 19 chr2 208967354 208968218 -44288365 - L1ME2 LINE L1 -28 6136 5256 582 279 114 4 chr2 208968238 208968565 -44288018 - LTR16A LTR ERVL -5 445 63 888 221 50 33 chr2 208968625 208969084 -44287499 - L1ME2 LINE L1 -899 5247 4682 4466 150 0 7 chr2 208969091 208969837 -44286746 + Tigger2 DNA MER2_type 4 744 -1974 1231 131 101 13 chr2 208969902 208970139 -44286444 + Tigger2 DNA MER2_type 2461 2718 0 360 125 57 34 chr2 208970163 208970251 -44286332 - L1ME2 LINE L1 -1495 4651 4562 1618 235 32 49 chr2 208970287 208970780 -44285803 + MLT1D LTR MaLR 21 505 0 2117 256 132 13 chr2 208970781 208971408 -44285175 - L1ME2 LINE L1 -1581 4565 3785 2079 134 3 0 chr2 208971408 208971699 -44284884 - AluJo SINE Alu -15 297 6 2117 256 132 13 chr2 208971699 208972019 -44284564 - L1ME2 LINE L1 -2361 3785 3505 1165 225 12 4 chr2 208972019 208972263 -44284320 + MLT1E LTR MaLR 348 593 0 864 190 139 13 chr2 208972263 208972579 -44284004 - L1ME2 LINE L1 -3146 3000 2645 1249 278 33 51 chr2 208972597 208973169 -44283414 + L1MCb LINE L1 1 562 -5483 1387 229 14 14 chr2 208973287 208973636 -44282947 + L1MCb LINE L1 599 947 -5098 23 33 0 0 chr2 208976691 208976721 -44279862 + AT_rich Low_complexity Low_complexity 1 30 0 252 86 0 0 chr2 208976913 208976948 -44279635 + (T)n Simple_repeat Simple_repeat 1 35 0 2091 117 0 0 chr2 208976989 208977271 -44279312 - AluSg1 SINE Alu -27 282 1 64 26 0 0 chr2 208977602 208977680 -44278903 + AT_rich Low_complexity Low_complexity 1 78 0 271 203 17 0 chr2 208977973 208978032 -44278551 + MIR SINE MIR 182 241 -21 212 209 23 35 chr2 208978058 208978144 -44278439 + T-rich Low_complexity Low_complexity 1 85 0 21 0 0 0 chr2 208978243 208978264 -44278319 + AT_rich Low_complexity Low_complexity 1 21 0 28 29 0 0 chr2 208978462 208978497 -44278086 + AT_rich Low_complexity Low_complexity 1 35 0 454 279 69 10 chr2 208978566 208978778 -44277805 - HAL1b LINE L1 -734 614 392 772 111 24 0 chr2 208978785 208978911 -44277672 - MLT1A1 LTR MaLR 0 365 237 1998 127 49 62 chr2 208978911 208979111 -44277472 - THE1B LTR MaLR 0 364 170 2287 109 0 3 chr2 208979111 208979414 -44277169 - AluSg SINE Alu -8 302 1 1998 127 49 62 chr2 208979414 208979582 -44277001 - THE1B LTR MaLR -194 170 1 339 62 0 0 chr2 208979582 208979630 -44276953 - THE1B-int LTR MaLR 0 1580 1533 * 5984 91 31 0 chr2 208979628 208980486 -44276097 - THE1B-int LTR MaLR -695 885 1 2291 112 48 28 chr2 208980486 208980843 -44275740 - THE1B LTR MaLR 0 364 1 1286 124 0 5 chr2 208980861 208981062 -44275521 - MLT1A1 LTR MaLR -165 200 1 287 260 101 35 chr2 208981072 208981241 -44275342 - HAL1 LINE L1 -1045 1462 1283 4223 144 25 29 chr2 208981308 208982115 -44274468 - L1MB4 LINE L1 -1 6179 5376 319 315 60 8 chr2 208982135 208982370 -44274213 - L1MEd LINE L1 -4958 1161 915 348 300 80 35 chr2 208982395 208982595 -44273988 - HAL1 LINE L1 -1506 1001 793 245 219 14 0 chr2 208983026 208983099 -44273484 + CT-rich Low_complexity Low_complexity 4 77 0 282 116 0 0 chr2 208983288 208983331 -44273252 + (TG)n Simple_repeat Simple_repeat 2 44 0 21 57 0 0 chr2 208984313 208984348 -44272235 + AT_rich Low_complexity Low_complexity 1 35 0 180 0 0 0 chr2 208984666 208984686 -44271897 + (TTTTTG)n Simple_repeat Simple_repeat 1 20 0 350 204 10 48 chr2 208985011 208985114 -44271469 + LTR67 LTR ERVL 459 557 0 2134 205 84 2 chr2 208985433 208985911 -44270672 + LTR53 LTR ERVL 3 519 0 281 319 88 20 chr2 208986589 208986793 -44269790 + MIR SINE MIR 26 243 -19 628 136 0 0 chr2 208986844 208986932 -44269651 + AluJb SINE Alu 204 291 -21 733 150 0 0 chr2 208987464 208987577 -44269006 - AluJb SINE Alu -115 197 85 618 313 16 48 chr2 208987617 208987866 -44268717 + MIR SINE MIR 22 262 0 3133 174 48 32 chr2 208989101 208989489 -44267094 + L1MD2 LINE L1 5637 6042 -317 2250 101 0 19 chr2 208989489 208989797 -44266786 + AluY SINE Alu 1 302 -9 3133 174 48 32 chr2 208989797 208990119 -44266464 + L1MD2 LINE L1 6042 6358 -1 2081 125 0 0 chr2 208992695 208992974 -44263609 - AluSx SINE Alu -28 284 6 240 342 0 25 chr2 208994117 208994196 -44262387 + MER5B DNA MER1_type 24 100 -78 22 0 0 0 chr2 208994200 208994222 -44262361 + AT_rich Low_complexity Low_complexity 1 22 0 686 181 0 24 chr2 208994222 208994349 -44262234 - FLAM_C SINE Alu -14 129 6 369 248 44 18 chr2 208994733 208994846 -44261737 - MIR SINE MIR -98 164 49 26 30 0 0 chr2 208994907 208994940 -44261643 + AT_rich Low_complexity Low_complexity 1 33 0 2310 82 0 0 chr2 208995335 208995641 -44260942 - AluY SINE Alu 0 306 1 969 215 36 31 chr2 208996918 208997141 -44259442 - MER58A DNA MER1_type 0 224 1 310 299 197 0 chr2 208997232 208997379 -44259204 - MIR SINE MIR -16 246 71 678 273 39 55 chr2 208997591 208997808 -44258775 + MIR SINE MIR 12 222 -40 266 352 0 0 chr2 208997896 208997987 -44258596 + GA-rich Low_complexity Low_complexity 3 93 0 2012 149 7 0 chr2 208998495 208998790 -44257793 - AluJo SINE Alu -15 297 1 400 294 25 17 chr2 208998997 208999116 -44257467 + L2 LINE L2 3153 3272 0 669 13 0 0 chr2 208999424 208999502 -44257081 + (TG)n Simple_repeat Simple_repeat 2 79 0 1848 153 7 4 chr2 208999502 208999783 -44256800 - AluJo SINE Alu -28 284 3 364 281 183 36 chr2 208999835 209000223 -44256360 - L1ME4a LINE L1 -180 5941 5497 1545 169 35 28 chr2 209000332 209000445 -44256138 + AluJo SINE Alu 21 132 -180 243 0 0 0 chr2 209000445 209000472 -44256111 + (TTA)n Simple_repeat Simple_repeat 1 27 0 1545 169 35 28 chr2 209000472 209000648 -44255935 + AluJo SINE Alu 132 312 0 2289 140 6 0 chr2 209000665 209001023 -44255560 - MER46B DNA MER2_type 0 236 2 218 179 0 0 chr2 209002394 209002433 -44254150 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 270 320 195 20 chr2 209002523 209002723 -44253860 - MIR SINE MIR -12 250 16 269 314 0 12 chr2 209002816 209002902 -44253681 - MIR3 SINE MIR -8 200 116 180 0 0 0 chr2 209004220 209004240 -44252343 + (T)n Simple_repeat Simple_repeat 1 20 0 292 214 78 48 chr2 209004554 209004657 -44251926 + MLT1K LTR MaLR 483 588 0 259 305 126 0 chr2 209004853 209004959 -44251624 - MIR3 SINE MIR -37 171 51 301 275 58 127 chr2 209005207 209005672 -44250911 + MLT1K LTR MaLR 143 575 -13 5190 148 21 45 chr2 209005880 209006877 -44249706 + L1MA7 LINE L1 4377 5396 -895 1844 162 133 16 chr2 209006877 209007260 -44249323 - MSTA LTR MaLR 0 428 1 9392 124 38 43 chr2 209007260 209008846 -44247737 - MSTA-int LTR MaLR 0 1580 3 1950 131 121 40 chr2 209008848 209009244 -44247339 - MSTA LTR MaLR 0 428 1 5190 148 21 45 chr2 209009244 209010197 -44246386 + L1MA7 LINE L1 5396 6290 -1 271 303 8 0 chr2 209010393 209010512 -44246071 + L1M4 LINE L1 5175 5294 -852 1230 249 101 56 chr2 209011136 209011730 -44244853 + HsTC2a DNA Tc2 124 744 0 606 217 37 12 chr2 209011734 209011895 -44244688 - MIR SINE MIR 0 262 98 23 0 0 0 chr2 209013325 209013348 -44243235 + AT_rich Low_complexity Low_complexity 1 23 0 464 275 18 0 chr2 209013807 209013916 -44242667 + L2 LINE L2 3203 3313 0 200 234 0 62 chr2 209014588 209014652 -44241931 + CT-rich Low_complexity Low_complexity 3 62 0 16791 222 30 24 chr2 209016487 209023869 -44232714 + L1PA15 LINE L1 45 7584 -19 658 200 55 0 chr2 209023871 209024016 -44232567 + MIR SINE MIR 109 261 -1 473 223 0 19 chr2 209024172 209024275 -44232308 + MER5A DNA MER1_type 4 104 -85 335 175 19 19 chr2 209025014 209025117 -44231466 + (CA)n Simple_repeat Simple_repeat 1 103 0 477 0 0 0 chr2 209026425 209026478 -44230105 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 392 215 6 17 chr2 209027055 209027227 -44229356 + (CA)n Simple_repeat Simple_repeat 1 170 0 252 221 0 0 chr2 209027243 209027320 -44229263 + (CA)n Simple_repeat Simple_repeat 1 77 0 244 266 24 40 chr2 209028880 209029004 -44227579 + LTR67 LTR ERVL 426 547 -10 262 330 139 19 chr2 209029105 209029372 -44227211 - LTR67 LTR ERVL -127 430 132 416 263 8 8 chr2 209029457 209029575 -44227008 + MLT1F1 LTR MaLR 422 539 -28 4638 236 93 40 chr2 209029584 209030040 -44226543 + L1M4 LINE L1 2162 2593 -3553 1758 213 0 0 chr2 209030040 209030336 -44226247 - AluJb SINE Alu -16 296 1 4638 236 93 40 chr2 209030336 209031255 -44225328 + L1M4 LINE L1 2593 3462 -2684 2304 117 0 3 chr2 209031255 209031563 -44225020 + AluSq SINE Alu 1 307 -6 4638 236 93 40 chr2 209031563 209032917 -44223666 + L1M4 LINE L1 3462 5105 -1041 188 293 93 0 chr2 209032922 209032997 -44223586 + MIR SINE MIR 170 251 -11 292 278 28 49 chr2 209033016 209033160 -44223423 - MIR SINE MIR -37 225 85 2166 125 61 19 chr2 209034106 209034466 -44222117 - THE1C LTR MaLR 0 375 1 1233 240 77 32 chr2 209034821 209035263 -44221320 - MLT1C LTR MaLR 0 467 6 2071 126 30 40 chr2 209035330 209035734 -44220849 + L1MA5 LINE L1 5901 6300 0 2084 114 36 23 chr2 209035961 209036269 -44220314 + AluSx SINE Alu 1 312 0 193 210 48 18 chr2 209036888 209037055 -44219528 + (TATG)n Simple_repeat Simple_repeat 2 173 0 475 291 120 16 chr2 209037063 209037278 -44219305 - MIR SINE MIR -27 235 16 302 256 112 0 chr2 209037278 209037403 -44219180 + L1ME4a LINE L1 5977 6115 -6 316 333 33 17 chr2 209037714 209037834 -44218749 + L2 LINE L2 3150 3271 -1 1952 176 24 3 chr2 209038030 209038405 -44218178 - L1MB5 LINE L1 -14 6160 5778 272 336 41 8 chr2 209038524 209038646 -44217937 + L3b LINE CR1 1278 1403 -180 1027 188 43 51 chr2 209039823 209040099 -44216484 + ORSL DNA AcHobo 2 275 0 211 375 29 0 chr2 209040298 209040402 -44216181 - L2 LINE L2 -649 2665 2559 633 254 86 105 chr2 209041460 209041842 -44214741 + MLT1J LTR MaLR 102 476 -35 219 69 0 0 chr2 209042599 209042628 -44213955 + (A)n Simple_repeat Simple_repeat 1 29 0 511 265 95 0 chr2 209042656 209042803 -44213780 + MIR SINE MIR 84 244 -18 182 136 23 0 chr2 209043097 209043141 -44213442 + (TGAA)n Simple_repeat Simple_repeat 4 48 0 245 294 174 0 chr2 209044847 209044939 -44211644 - L2 LINE L2 -1 3271 3164 232 322 17 0 chr2 209045110 209045169 -44211414 + MER91 DNA MER1_type 135 194 -2 2504 56 0 31 chr2 209045459 209045778 -44210805 + AluY SINE Alu 1 309 -2 338 302 87 85 chr2 209048792 209049469 -44207114 - L2 LINE L2 -5 3267 2595 443 255 105 50 chr2 209050103 209050303 -44206280 - MIR SINE MIR -8 254 44 1775 183 7 3 chr2 209050394 209050695 -44205888 + AluJo SINE Alu 1 302 -10 212 419 78 6 chr2 209051437 209051604 -44204979 + L3b LINE CR1 1402 1580 -3 265 256 33 22 chr2 209051815 209051905 -44204678 + GA-rich Low_complexity Low_complexity 1 91 0 752 203 74 0 chr2 209052410 209052573 -44204010 - MER69A DNA AcHobo -2 175 1 204 269 103 0 chr2 209052573 209052651 -44203932 - MIR SINE MIR -60 202 117 458 298 16 8 chr2 209053801 209053925 -44202658 - MIR SINE MIR -122 140 16 277 62 77 0 chr2 209054089 209054154 -44202429 + (TA)n Simple_repeat Simple_repeat 2 71 0 291 293 137 97 chr2 209055673 209055994 -44200589 + L2 LINE L2 2939 3272 0 185 359 8 62 chr2 209057306 209057434 -44199149 - MIR SINE MIR -65 143 23 2722 90 3 5 chr2 209057580 209057956 -44198627 + THE1C LTR MaLR 1 375 0 735 273 5 50 chr2 209058264 209058484 -44198099 - MIR SINE MIR -46 216 7 491 81 0 14 chr2 209058489 209058563 -44198020 + (TTCC)n Simple_repeat Simple_repeat 4 76 0 916 266 105 27 chr2 209058626 209059217 -44197366 - L1ME3A LINE L1 -253 5916 5262 4452 231 71 51 chr2 209059322 209059640 -44196943 - L1ME LINE L1 -516 5717 5407 2428 93 0 0 chr2 209059640 209059950 -44196633 - AluY SINE Alu -1 310 1 4452 231 71 51 chr2 209059950 209060964 -44195619 - L1ME LINE L1 -826 5407 4415 1886 239 58 38 chr2 209060964 209061000 -44195583 + MLT1E LTR MaLR 1 35 -558 2362 84 7 0 chr2 209061000 209061296 -44195287 - AluSq SINE Alu -15 298 1 1886 239 58 38 chr2 209061296 209061840 -44194743 + MLT1E LTR MaLR 35 593 0 4452 231 71 51 chr2 209061840 209062898 -44193685 - L1ME LINE L1 -1818 4415 3265 836 158 0 0 chr2 209062905 209063025 -44193558 - FLAM_C SINE Alu -19 124 5 490 242 47 20 chr2 209063031 209063328 -44193255 - L1ME LINE L1 -2944 3271 2967 272 311 34 0 chr2 209063405 209063582 -44193001 - L1M3d LINE L1 -4704 1187 1005 1098 316 94 30 chr2 209063658 209064555 -44192028 - L1ME LINE L1 -5393 1003 50 489 309 56 74 chr2 209064567 209064891 -44191692 - L1ME3A LINE L1 -2189 3957 3640 2888 117 63 20 chr2 209064911 209065417 -44191166 - L1MA5 LINE L1 -3 6297 5770 3332 132 24 6 chr2 209065417 209065954 -44190629 - L1PA16 LINE L1 -2 6164 5616 536 71 44 3 chr2 209065954 209066043 -44190540 - L1ME LINE L1 -378 5784 5692 2134 198 53 24 chr2 209066058 209066549 -44190034 - MLT1D LTR MaLR 0 505 1 489 159 0 45 chr2 209066937 209067025 -44189558 - AluSg/x SINE Alu -17 292 209 405 316 47 48 chr2 209067165 209068180 -44188403 - L1M4 LINE L1 -996 5150 4137 609 296 93 3 chr2 209068180 209068491 -44188092 - Tigger8 DNA MER2_type -188 478 140 847 77 26 0 chr2 209069125 209069242 -44187341 - MER41B LTR ERV1 0 635 516 439 97 0 0 chr2 209069242 209069304 -44187279 + Alu SINE Alu 1 62 -248 781 157 5 9 chr2 209119322 209119538 -44137045 + (TG)n Simple_repeat Simple_repeat 1 215 0 204 330 0 35 chr2 209119548 209119663 -44136920 - L2 LINE L2 -1634 1680 1570 272 360 35 0 chr2 209119724 209119838 -44136745 - L2 LINE L2 -1882 1432 1315 2067 152 0 0 chr2 209119960 209120270 -44136313 - AluJb SINE Alu -2 310 1 331 196 54 54 chr2 209120730 209120822 -44135761 - LTR8 LTR ERV1 -598 93 2 2183 211 47 9 chr2 209120823 209121287 -44135296 - MER21B LTR ERV1 -284 579 98 451 217 0 22 chr2 209121341 209121433 -44135150 - MER21B LTR ERV1 -773 90 1 3195 187 34 38 chr2 209121786 209122200 -44134383 - LTR26E LTR ERV1 0 622 211 1584 169 0 100 chr2 209122200 209122531 -44134052 - AluJo SINE Alu -14 298 1 3195 187 34 38 chr2 209122531 209122741 -44133842 - LTR26E LTR ERV1 -411 211 1 251 324 9 29 chr2 209124810 209124915 -44131668 - L1ME LINE L1 -458 5663 5561 302 292 48 48 chr2 209125440 209125608 -44130975 + MIR SINE MIR 48 215 -47 2509 230 65 37 chr2 209126064 209126839 -44129744 + L1ME3 LINE L1 4447 5242 -904 22 0 0 0 chr2 209126839 209126861 -44129722 + AT_rich Low_complexity Low_complexity 1 22 0 332 273 11 45 chr2 209126871 209127047 -44129536 + (CATA)n Simple_repeat Simple_repeat 3 172 0 24 0 0 0 chr2 209127047 209127071 -44129512 + AT_rich Low_complexity Low_complexity 1 24 0 2115 135 0 0 chr2 209127097 209127385 -44129198 + AluSx SINE Alu 1 288 -24 3183 211 80 28 chr2 209127416 209128270 -44128313 + L1ME3 LINE L1 5265 6162 0 325 359 105 0 chr2 209128336 209128517 -44128066 - MIR3 SINE MIR -5 203 4 2284 113 131 53 chr2 209128760 209129157 -44127426 - MSTA LTR MaLR 0 428 1 10158 159 21 19 chr2 209129157 209130804 -44125779 - MSTA-int LTR MaLR 0 1651 1 2507 103 137 11 chr2 209130804 209131184 -44125399 - MSTA LTR MaLR 0 428 1 673 285 199 0 chr2 209131216 209131462 -44125121 - L2 LINE L2 -16 3297 3003 2066 197 47 17 chr2 209131631 209132222 -44124361 + L1MB7 LINE L1 5110 5709 -465 2424 184 29 0 chr2 209132342 209132792 -44123791 + L1MB7 LINE L1 5703 6165 -19 262 284 128 10 chr2 209135210 209135312 -44121271 + L2 LINE L2 3199 3312 -1 2794 248 161 45 chr2 209135361 209136949 -44119634 + HAL1 LINE L1 435 2205 -302 1860 221 30 6 chr2 209136962 209137428 -44119155 + L1MB8 LINE L1 5702 6178 0 644 309 78 47 chr2 209137428 209137590 -44118993 + L2 LINE L2 2445 2601 -712 3830 115 2 4 chr2 209137590 209138102 -44118481 + MER9 LTR ERVK 1 511 0 644 309 78 47 chr2 209138102 209138763 -44117820 + L2 LINE L2 2601 3295 -18 425 276 32 0 chr2 209138812 209138935 -44117648 + MIR SINE MIR 79 205 -57 604 156 75 151 chr2 209139458 209139657 -44116926 - MER5A DNA MER1_type 0 189 6 779 228 170 16 chr2 209139779 209140091 -44116492 - LTR33A LTR ERVL -10 513 154 426 20 0 0 chr2 209140114 209140165 -44116418 + (CA)n Simple_repeat Simple_repeat 2 52 0 228 273 18 18 chr2 209140227 209140282 -44116301 - L2 LINE L2 -71 3201 3147 845 166 25 25 chr2 209140372 209140535 -44116048 + MLT1A1 LTR MaLR 26 188 -177 777 197 71 16 chr2 209140707 209140890 -44115693 + MLT1A1 LTR MaLR 173 365 0 418 310 144 0 chr2 209142784 209142971 -44113612 + MIR SINE MIR 48 261 -1 205 264 38 0 chr2 209143050 209143103 -44113480 + L2 LINE L2 3250 3304 -9 1945 99 0 8 chr2 209143445 209143708 -44112875 + AluSg1 SINE Alu 47 307 -2 735 261 53 53 chr2 209145893 209146157 -44110426 - MER21B LTR ERV1 -125 738 475 * 3757 159 51 15 chr2 209146153 209146839 -44109744 - MER50 LTR ERV1 -23 711 1 1070 205 35 175 chr2 209146843 209146997 -44109586 - MER21B LTR ERV1 -396 467 293 880 190 14 0 chr2 209146997 209147178 -44109405 + FRAM SINE Alu 1 50 0 1070 205 35 175 chr2 209147178 209147555 -44109028 - MER21B LTR ERV1 -570 293 25 23 0 0 0 chr2 209148140 209148163 -44108420 + AT_rich Low_complexity Low_complexity 1 23 0 2903 219 52 21 chr2 209148360 209149074 -44107509 + L1ME1 LINE L1 5405 6140 -26 38 51 0 0 chr2 209149074 209149133 -44107450 + AT_rich Low_complexity Low_complexity 1 59 0 351 0 0 0 chr2 209149254 209149293 -44107290 + (CAAAA)n Simple_repeat Simple_repeat 3 41 0 1952 127 60 0 chr2 209149621 209149904 -44106679 + AluSx SINE Alu 1 300 -12 1635 191 3 3 chr2 209150218 209150511 -44106072 + AluJo SINE Alu 1 293 -19 2067 136 3 7 chr2 209151067 209151375 -44105208 + AluSx SINE Alu 1 307 -5 2315 200 61 7 chr2 209151467 209151912 -44104671 + MER70B LTR ERVL 1 469 -109 1312 220 106 73 chr2 209152062 209152655 -44103928 + L1MC4 LINE L1 7445 7995 0 553 271 148 0 chr2 209154548 209154703 -44101880 - MER5A DNA MER1_type -3 186 9 482 315 148 0 chr2 209155873 209156089 -44100494 - MIR SINE MIR 0 262 15 886 278 77 22 chr2 209156341 209156798 -44099785 + L2 LINE L2 2512 3049 -264 985 233 134 39 chr2 209156798 209157308 -44099275 - MLT1G1 LTR MaLR 0 590 1 2358 166 128 0 chr2 209157410 209157856 -44098727 - MLT1D LTR MaLR 0 505 3 485 282 58 11 chr2 209157857 209158031 -44098552 + L2 LINE L2 3128 3309 -4 211 191 24 0 chr2 209158050 209158092 -44098491 - L2 LINE L2 -10 3303 3261 207 69 0 0 chr2 209158565 209158594 -44097989 + (TG)n Simple_repeat Simple_repeat 2 30 0 364 323 32 19 chr2 209159072 209159230 -44097353 + MIR SINE MIR 94 253 -9 1167 131 17 0 chr2 209159305 209159480 -44097103 - L1MC1 LINE L1 0 6333 6156 739 223 43 18 chr2 209159483 209159753 -44096830 - MSTB LTR MaLR 0 375 115 3948 132 113 38 chr2 209159753 209161030 -44095553 + pTR5 LTR ERV1 746 2412 -26 808 201 19 0 chr2 209161030 209161184 -44095399 - MSTB LTR MaLR -269 157 1 2544 148 21 5 chr2 209161184 209161616 -44094967 - L1MC1 LINE L1 -179 6154 5716 389 289 75 25 chr2 209162416 209162575 -44094008 + MIR3 SINE MIR 33 199 -9 329 314 43 21 chr2 209162815 209162955 -44093628 + MIR SINE MIR 90 232 -30 418 320 113 48 chr2 209163803 209164112 -44092471 + L2 LINE L2 2941 3269 -3 2127 106 3 30 chr2 209164568 209164871 -44091712 + AluSq SINE Alu 1 295 -18 910 274 36 30 chr2 209166234 209166595 -44089988 + LTR16B LTR ERVL 101 463 -1 703 233 57 65 chr2 209166711 209166956 -44089627 + MER46C DNA MER2_type 94 336 -2 354 258 50 48 chr2 209166985 209167029 -44089554 + MLT1H LTR MaLR 5 47 -502 4874 151 191 54 chr2 209167029 209168153 -44088430 + MER52C LTR ERV1 1 1278 0 354 258 50 48 chr2 209168153 209168290 -44088293 + MLT1H LTR MaLR 47 226 -323 215 282 59 71 chr2 209169017 209169102 -44087481 + L2 LINE L2 3149 3232 -40 25 0 0 0 chr2 209169120 209169145 -44087438 + AT_rich Low_complexity Low_complexity 1 25 0 2282 106 0 0 chr2 209169516 209169809 -44086774 + AluSc SINE Alu 1 293 -16 5764 179 38 31 chr2 209172385 209173163 -44083420 + L1MB7 LINE L1 3935 4706 -1478 1905 153 0 20 chr2 209173163 209173458 -44083125 + AluJb SINE Alu 1 289 -23 5764 179 38 31 chr2 209173458 209174857 -44081726 + L1MB7 LINE L1 4706 6126 -58 369 195 13 26 chr2 209175046 209175123 -44081460 - MER116 DNA Mariner -2 78 3 248 290 0 0 chr2 209175159 209175228 -44081355 + MLT1I LTR MaLR 72 140 -269 561 335 44 15 chr2 209176208 209176414 -44080169 - MIR SINE MIR -14 248 37 1673 236 137 25 chr2 209177297 209177860 -44078723 - MLT1E2 LTR MaLR 0 626 1 186 43 0 0 chr2 209178293 209178316 -44078267 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 310 333 47 8 chr2 209179898 209180027 -44076556 - L2 LINE L2 0 3272 3139 314 214 191 104 chr2 209180706 209180926 -44075657 - MER102a DNA MER1_type 0 330 92 2226 120 0 0 chr2 209180934 209181243 -44075340 - AluSx SINE Alu -3 309 1 1629 171 13 13 chr2 209181246 209181555 -44075028 - L1 LINE L1 -1225 4921 4613 380 197 53 0 chr2 209181556 209181632 -44074951 - MER102a DNA MER1_type -220 110 31 306 311 25 42 chr2 209181847 209181966 -44074617 - L2 LINE L2 -9 3263 3147 893 354 106 22 chr2 209182022 209182555 -44074028 - L2 LINE L2 -345 2969 2482 513 32 0 0 chr2 209182555 209182618 -44073965 + (TG)n Simple_repeat Simple_repeat 2 64 0 893 354 106 22 chr2 209182618 209183002 -44073581 - L2 LINE L2 -832 2482 1975 3365 193 21 23 chr2 209183146 209183323 -44073260 + L1M2 LINE L1 4666 4842 -1334 2149 105 26 10 chr2 209183323 209183629 -44072954 - AluSq SINE Alu -2 311 1 3365 193 21 23 chr2 209183629 209184224 -44072359 + L1M2 LINE L1 4842 5433 -743 1956 173 31 0 chr2 209184349 209184701 -44071882 + L1M2 LINE L1 5423 5785 -506 1173 148 10 0 chr2 209184706 209184902 -44071681 + L1PBa LINE L1 3 200 -6663 * 4018 125 206 17 chr2 209184882 209185657 -44070926 + L1PBa LINE L1 620 1541 -5322 7088 95 81 14 chr2 209185660 209185987 -44070596 + L1PBa LINE L1 1769 2073 -4789 2122 155 0 0 chr2 209185987 209186297 -44070286 + AluSq SINE Alu 1 310 -3 7088 95 81 14 chr2 209186297 209187136 -44069447 + L1PBa LINE L1 2073 3013 -3849 1985 124 37 9 chr2 209187137 209187528 -44069055 - LTR7 LTR ERV1 0 450 1 2828 107 9 7 chr2 209187528 209187958 -44068625 - HERVH LTR ERV1 0 7713 7283 3415 235 8 5 chr2 209187959 209188734 -44067849 + L1 LINE L1 3009 3785 -3077 2175 133 105 40 chr2 209188734 209189310 -44067273 + MER51B LTR ERV1 1 377 0 281 200 40 0 chr2 209189311 209189411 -44067172 + L1 LINE L1 3783 3886 -2976 16344 88 9 11 chr2 209189424 209192333 -44064250 + L1PA7 LINE L1 3239 6149 -5 21 36 0 0 chr2 209192420 209192448 -44064135 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 209192551 209192579 -44064004 + AT_rich Low_complexity Low_complexity 1 28 0 2761 76 8 46 chr2 209192626 209193021 -44063562 + L1PB1 LINE L1 5772 6151 0 1878 115 0 4 chr2 209193038 209193290 -44063293 - AluSg SINE Alu -24 286 36 876 120 0 0 chr2 209193299 209193432 -44063151 + L1PB1 LINE L1 6017 6149 -2 2564 157 49 31 chr2 209193440 209193951 -44062632 + L1MA7 LINE L1 5770 6289 -2 24 0 0 0 chr2 209193951 209193975 -44062608 + AT_rich Low_complexity Low_complexity 1 24 0 1604 159 17 44 chr2 209194614 209194909 -44061674 + AluJb SINE Alu 1 287 -25 188 247 96 0 chr2 209195354 209195427 -44061156 + L2 LINE L2 2958 3037 -276 26 30 0 0 chr2 209196160 209196193 -44060390 + AT_rich Low_complexity Low_complexity 1 33 0 900 224 101 0 chr2 209196196 209196415 -44060168 - MIR SINE MIR -21 241 1 273 330 36 9 chr2 209198060 209198172 -44058411 + L2 LINE L2 3191 3305 -8 186 191 29 15 chr2 209198863 209198931 -44057652 + CT-rich Low_complexity Low_complexity 4 72 0 835 263 136 42 chr2 209198963 209199420 -44057163 - LTR33 LTR ERVL -19 502 3 306 0 0 0 chr2 209199724 209199758 -44056825 + (CA)n Simple_repeat Simple_repeat 2 35 0 750 158 14 7 chr2 209200450 209200596 -44055987 - Tigger2 DNA MER2_type -305 2413 2267 495 132 0 0 chr2 209200581 209200649 -44055934 - Tigger2 DNA MER2_type -2650 68 1 * 729 304 82 43 chr2 209201418 209202055 -44054528 - L1ME4a LINE L1 -203 5918 5255 21 0 0 0 chr2 209202285 209202306 -44054277 + AT_rich Low_complexity Low_complexity 1 21 0 988 231 82 12 chr2 209202576 209202628 -44053955 - MLT1J2 LTR MaLR -140 310 263 1435 181 9 0 chr2 209202628 209202849 -44053734 + MER58A DNA MER1_type 2 224 0 988 231 82 12 chr2 209202849 209203051 -44053532 - MLT1J2 LTR MaLR -187 263 38 1347 269 34 13 chr2 209203119 209203502 -44053081 - MLT1I LTR MaLR -9 400 10 789 260 39 10 chr2 209205206 209205302 -44051281 + MIR SINE MIR 23 115 -147 1600 180 10 35 chr2 209205302 209205613 -44050970 - AluJb SINE Alu -9 303 1 789 260 39 10 chr2 209205613 209205720 -44050863 + MIR SINE MIR 115 232 -30 288 0 0 0 chr2 209206101 209206133 -44050450 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 32 103 0 0 chr2 209207054 209207170 -44049413 + GC_rich Low_complexity Low_complexity 1 116 0 23 33 0 0 chr2 209208236 209208266 -44048317 + AT_rich Low_complexity Low_complexity 1 30 0 210 37 0 0 chr2 209208899 209208926 -44047657 + (CA)n Simple_repeat Simple_repeat 2 28 0 329 256 0 12 chr2 209211401 209211487 -44045096 + L2 LINE L2 3178 3262 -10 327 309 135 39 chr2 209212644 209212822 -44043761 + L3 LINE CR1 1268 1462 -115 * 469 259 153 26 chr2 209212808 209212997 -44043586 - MIR SINE MIR -10 252 40 371 301 174 5 chr2 209213219 209213398 -44043185 - MIR SINE MIR -28 180 1 586 310 189 37 chr2 209213782 209214877 -44041706 + L2 LINE L2 1563 2823 -491 1278 167 39 8 chr2 209215001 209215258 -44041325 + MER33 DNA MER1_type 5 269 -55 363 182 15 0 chr2 209215299 209215365 -44041218 + MER33 DNA MER1_type 258 324 0 186 326 0 0 chr2 209215814 209215860 -44040723 + MIR SINE MIR 58 103 -105 1509 83 4 57 chr2 209216092 209216321 -44040262 + AluY SINE Alu 86 302 -9 481 294 64 30 chr2 209217471 209217688 -44038895 + MIR SINE MIR 5 224 -38 211 212 76 76 chr2 209219067 209219133 -44037450 - L3 LINE CR1 -47 1530 1465 1464 290 87 49 chr2 209219290 209219559 -44037024 - L3 LINE CR1 -195 1382 1125 2313 112 3 0 chr2 209219559 209219863 -44036720 + AluSx SINE Alu 1 305 -7 1464 290 87 49 chr2 209219863 209220352 -44036231 - L3 LINE CR1 -452 1125 595 430 181 118 8 chr2 209221281 209221408 -44035175 - L1ME4a LINE L1 -7 6114 5974 221 235 0 0 chr2 209221409 209221460 -44035123 + (TG)n Simple_repeat Simple_repeat 2 52 0 731 290 68 16 chr2 209221505 209221753 -44034830 + MIR SINE MIR 2 262 0 324 199 46 15 chr2 209221755 209221886 -44034697 - L1ME4a LINE L1 -217 5904 5770 537 262 83 35 chr2 209222016 209222245 -44034338 - MIR SINE MIR -3 259 20 262 373 47 6 chr2 209223421 209223590 -44032993 + MIR SINE MIR 21 196 -66 208 254 0 17 chr2 209224785 209224844 -44031739 - L2 LINE L2 -1 3271 3214 2205 120 3 0 chr2 209225648 209225949 -44030634 - AluSx SINE Alu -10 302 1 415 258 143 38 chr2 209226202 209226411 -44030172 - MIR SINE MIR -12 250 20 617 224 9 0 chr2 209226430 209226546 -44030037 - FAM SINE Alu -68 117 1 378 246 42 14 chr2 209226604 209226746 -44029837 - L1ME4a LINE L1 -6 6115 5970 279 213 103 140 chr2 209226760 209226896 -44029687 + MARNA DNA Mariner 73 203 -383 2052 111 0 60 chr2 209227003 209227318 -44029265 - AluSx SINE Alu -16 296 1 2278 106 0 0 chr2 209227393 209227686 -44028897 + AluSx SINE Alu 1 293 -19 231 88 0 0 chr2 209228132 209228166 -44028417 + (CA)n Simple_repeat Simple_repeat 1 34 0 183 298 0 18 chr2 209228584 209228641 -44027942 + L2 LINE L2 3216 3271 -1 385 267 68 50 chr2 209228692 209228853 -44027730 - MIR3 SINE MIR -15 193 30 547 261 70 35 chr2 209229199 209229398 -44027185 + MIR SINE MIR 57 262 0 802 254 34 14 chr2 209229410 209229619 -44026964 - MIR SINE MIR -27 235 23 232 188 0 21 chr2 209230100 209230148 -44026435 + MIR SINE MIR 8 54 -208 555 284 50 20 chr2 209230247 209230448 -44026135 + MIR SINE MIR 2 208 -54 685 274 33 46 chr2 209231829 209232070 -44024513 + MIR SINE MIR 22 259 -3 269 89 22 0 chr2 209232425 209232470 -44024113 + (GA)n Simple_repeat Simple_repeat 1 46 0 1726 174 0 17 chr2 209232514 209232812 -44023771 - AluJo SINE Alu -19 293 1 21 36 0 0 chr2 209232996 209233024 -44023559 + AT_rich Low_complexity Low_complexity 1 28 0 237 65 0 0 chr2 209233038 209233069 -44023514 + (TG)n Simple_repeat Simple_repeat 2 32 0 570 210 44 14 chr2 209233117 209233263 -44023320 + L1ME3A LINE L1 5742 5892 -278 1709 174 13 32 chr2 209233263 209233579 -44023004 + AluJb SINE Alu 1 310 -2 570 210 44 14 chr2 209233579 209233595 -44022988 + L1ME3A LINE L1 5892 5906 -264 386 168 20 0 chr2 209233631 209233732 -44022851 - L1MA4A LINE L1 -3 6300 6198 31 0 0 0 chr2 209233738 209233769 -44022814 + AT_rich Low_complexity Low_complexity 1 31 0 7482 31 0 10 chr2 209233769 209235416 -44021167 - L1PA4 LINE L1 -2 6153 4516 938 100 0 8 chr2 209235542 209235672 -44020911 + AluY SINE Alu 181 309 -2 1214 269 119 18 chr2 209235967 209236580 -44020003 + Charlie7 DNA MER1_type 2 676 -1936 232 143 0 29 chr2 209236620 209236690 -44019893 + Charlie7 DNA MER1_type 2476 2543 -69 298 317 24 0 chr2 209238127 209238209 -44018374 + L2 LINE L2 3184 3267 -5 2081 144 0 0 chr2 209238292 209238590 -44017993 - AluJb SINE Alu -14 298 1 855 232 3 116 chr2 209241300 209241584 -44014999 - MIR SINE MIR -8 254 3 337 316 52 35 chr2 209241584 209241692 -44014891 + MIR SINE MIR 87 197 -65 2196 88 10 3 chr2 209241957 209242252 -44014331 - AluY SINE Alu -14 297 1 23 54 0 0 chr2 209243209 209243246 -44013337 + AT_rich Low_complexity Low_complexity 1 37 0 430 271 105 46 chr2 209243764 209244089 -44012494 + L1ME4a LINE L1 5541 5884 -237 51 0 0 0 chr2 209244301 209244352 -44012231 + AT_rich Low_complexity Low_complexity 1 51 0 5663 127 12 4 chr2 209244352 209245575 -44011008 - L1PA14 LINE L1 -20 6141 4912 387 390 10 34 chr2 209246489 209246694 -44009889 + MIR3 SINE MIR 7 206 -2 359 252 44 37 chr2 209247438 209247573 -44009010 + MLT1J LTR MaLR 7 142 -369 288 294 129 43 chr2 209247635 209247914 -44008669 - MLT1K LTR MaLR -170 418 116 246 324 206 14 chr2 209248854 209249073 -44007510 + MIR SINE MIR 2 262 0 273 278 130 0 chr2 209249505 209249613 -44006970 - MIR3 SINE MIR -18 190 69 2009 152 0 7 chr2 209249617 209249913 -44006670 + AluSx SINE Alu 1 294 -18 528 330 88 26 chr2 209250120 209250426 -44006157 - HAL1 LINE L1 -1796 711 387 454 291 45 77 chr2 209250438 209250685 -44005898 - HAL1 LINE L1 -2226 281 43 29 0 0 0 chr2 209250725 209250754 -44005829 + AT_rich Low_complexity Low_complexity 1 29 0 1922 126 13 38 chr2 209250781 209251098 -44005485 - AluSx SINE Alu -3 309 1 21 0 0 0 chr2 209251743 209251764 -44004819 + AT_rich Low_complexity Low_complexity 1 21 0 531 0 0 0 chr2 209252577 209252636 -44003947 + (TA)n Simple_repeat Simple_repeat 1 59 0 2208 122 3 0 chr2 209254590 209254886 -44001697 + AluSx SINE Alu 1 297 -15 1714 137 175 18 chr2 209256976 209257318 -43999265 - MSTD LTR MaLR 0 396 1 1738 144 20 40 chr2 209258970 209259268 -43997315 + AluJo SINE Alu 1 292 -20 285 180 66 16 chr2 209260260 209260382 -43996201 + Charlie7 DNA MER1_type 2436 2563 -49 180 111 0 0 chr2 209261198 209261225 -43995358 + (CAGAA)n Simple_repeat Simple_repeat 2 28 0 348 77 0 0 chr2 209261228 209261280 -43995303 + (TG)n Simple_repeat Simple_repeat 1 52 0 254 231 0 0 chr2 209261345 209261397 -43995186 + (CA)n Simple_repeat Simple_repeat 2 53 0 309 341 92 48 chr2 209261613 209261886 -43994697 - L3b LINE CR1 -24 1559 1275 1721 171 3 27 chr2 209262219 209262517 -43994066 + AluJo SINE Alu 1 291 -21 730 283 111 34 chr2 209262591 209262951 -43993632 - MLT1J LTR MaLR -44 467 24 21 36 0 0 chr2 209263444 209263472 -43993111 + AT_rich Low_complexity Low_complexity 1 28 0 417 162 0 0 chr2 209264194 209264262 -43992321 + MER106A DNA MER1_type 1 68 -168 1141 179 157 8 chr2 209264282 209264544 -43992039 + MLT1D LTR MaLR 198 498 -7 191 376 46 0 chr2 209264549 209264658 -43991925 + MIR SINE MIR 123 236 -26 251 104 21 0 chr2 209265168 209265216 -43991367 + (TTTTG)n Simple_repeat Simple_repeat 4 52 0 210 290 89 24 chr2 209265404 209265528 -43991055 - MIR SINE MIR -6 256 125 484 292 21 102 chr2 209265896 209266228 -43990355 + L2 LINE L2 2966 3270 -2 436 306 32 25 chr2 209266235 209266392 -43990191 + MIR3 SINE MIR 45 202 -6 192 261 22 0 chr2 209268826 209268872 -43987711 - L2 LINE L2 -4 3309 3263 187 268 18 36 chr2 209269080 209269136 -43987447 + L2 LINE L2 3202 3256 -16 2085 129 0 0 chr2 209269403 209269710 -43986873 - AluSx SINE Alu 0 314 8 23 54 0 0 chr2 209269879 209269916 -43986667 + AT_rich Low_complexity Low_complexity 1 37 0 565 341 77 29 chr2 209270471 209270820 -43985763 + L3 LINE CR1 301 666 -911 855 242 52 24 chr2 209270845 209271056 -43985527 - MIR SINE MIR -3 259 43 765 301 61 31 chr2 209271074 209271400 -43985183 + L3 LINE CR1 669 1004 -573 230 179 0 0 chr2 209271518 209271557 -43985026 + MIR3 SINE MIR 167 205 -3 203 340 152 11 chr2 209271610 209271801 -43984782 + L3 LINE CR1 1276 1493 -84 419 277 92 21 chr2 209272466 209272607 -43983976 - L3 LINE CR1 -12 1565 1415 442 279 97 6 chr2 209272954 209273119 -43983464 + MIR SINE MIR 12 191 -71 493 181 0 76 chr2 209273149 209273254 -43983329 + L2 LINE L2 3217 3313 0 619 114 0 0 chr2 209273434 209273522 -43983061 + HY4 scRNA scRNA 2 89 -4 207 69 0 0 chr2 209273529 209273558 -43983025 + (A)n Simple_repeat Simple_repeat 1 29 0 2050 138 0 3 chr2 209275888 209276184 -43980399 - AluJb SINE Alu -17 295 1 234 296 138 8 chr2 209277171 209277295 -43979288 + MIR3 SINE MIR 32 170 -54 851 205 42 0 chr2 209277328 209277518 -43979065 - MIR SINE MIR -11 251 54 745 261 17 47 chr2 209279443 209279677 -43976906 + MIR SINE MIR 25 251 -11 221 313 75 0 chr2 209279681 209279748 -43976835 + L2 LINE L2 3193 3264 -8 1809 132 7 64 chr2 209282337 209282633 -43973950 - AluSx SINE Alu -33 279 1 871 222 36 27 chr2 209282887 209283112 -43973471 + MIR SINE MIR 36 262 0 650 194 31 47 chr2 209283270 209283461 -43973122 - MER5A DNA MER1_type -1 188 1 1246 194 11 0 chr2 209283469 209283737 -43972846 - MER33 DNA MER1_type 0 324 54 2273 71 4 0 chr2 209284595 209284910 -43971673 - AluY SINE Alu 0 316 1 2429 54 3 3 chr2 209285956 209286250 -43970333 - AluY SINE Alu -17 294 1 23 68 0 0 chr2 209286592 209286636 -43969947 + AT_rich Low_complexity Low_complexity 1 44 0 487 107 13 0 chr2 209287444 209287519 -43969064 + MADE1 DNA Mariner 1 76 -4 200 227 91 15 chr2 209288470 209288536 -43968047 - L2 LINE L2 -229 3084 3014 1752 150 4 4 chr2 209288549 209288815 -43967768 + AluJo SINE Alu 1 266 -46 833 258 103 9 chr2 209289694 209289927 -43966656 - MIR SINE MIR 0 262 8 217 322 91 8 chr2 209290211 209290332 -43966251 - MIR3 SINE MIR -35 173 43 215 242 113 32 chr2 209290369 209290431 -43966152 + L2 LINE L2 3144 3210 -62 976 312 61 28 chr2 209290520 209290949 -43965634 - L2 LINE L2 -42 3271 2829 1732 173 41 65 chr2 209291004 209291139 -43965444 + Charlie4a DNA MER1_type 26 163 -1798 1884 159 7 3 chr2 209291139 209291441 -43965142 + AluSx SINE Alu 1 303 -9 1732 173 41 65 chr2 209291441 209291797 -43964786 + Charlie4a DNA MER1_type 163 505 -3 323 267 35 0 chr2 209291818 209291904 -43964679 - L2 LINE L2 -542 2772 2684 292 310 26 43 chr2 209291962 209292078 -43964505 - MIR SINE MIR -129 133 20 10079 30 1 3 chr2 209292314 209293628 -43962955 + L1P LINE L1 2066 3376 -2770 1738 182 70 34 chr2 209294533 209294606 -43961977 + MLT1C LTR MaLR 7 76 -391 2426 121 8 6 chr2 209294606 209294969 -43961614 - THE1B LTR MaLR 0 364 1 1738 182 70 34 chr2 209294969 209295340 -43961243 + MLT1C LTR MaLR 76 467 0 233 210 48 16 chr2 209295454 209295516 -43961067 + MER69 DNA AcHobo 20 83 -94 31 0 0 0 chr2 209295525 209295556 -43961027 + AT_rich Low_complexity Low_complexity 1 31 0 1975 209 85 9 chr2 209296040 209296489 -43960094 + MER21B LTR ERV1 55 537 -326 342 244 0 0 chr2 209296490 209296568 -43960015 + Tigger5 DNA MER2_type 2 79 -2244 427 182 13 0 chr2 209296589 209296666 -43959917 + MER2 DNA MER2_type 268 345 0 * 927 160 4 117 chr2 209296666 209296896 -43959687 + MER21B LTR ERV1 611 814 -49 450 290 69 8 chr2 209299462 209299593 -43956990 + MIR SINE MIR 74 212 -50 2057 125 33 0 chr2 209299701 209300004 -43956579 + AluSq SINE Alu 1 313 0 378 0 0 0 chr2 209300005 209300047 -43956536 + (TA)n Simple_repeat Simple_repeat 2 43 0 297 242 59 85 chr2 209301721 209301874 -43954709 + L2 LINE L2 3165 3313 0 225 325 167 0 chr2 209302204 209302318 -43954265 - L2 LINE L2 -13 3259 3127 587 335 57 5 chr2 209302444 209302653 -43953930 + MIR SINE MIR 33 252 -10 474 244 125 23 chr2 209302924 209303100 -43953483 - L2 LINE L2 -1 3312 3119 21 0 0 0 chr2 209303342 209303363 -43953220 + AT_rich Low_complexity Low_complexity 1 21 0 259 300 0 0 chr2 209303642 209303712 -43952871 + L2 LINE L2 3242 3311 -2 574 205 151 42 chr2 209304502 209304645 -43951938 - MER5A DNA MER1_type -2 187 22 2037 184 63 31 chr2 209304645 209305134 -43951449 + MLT1D LTR MaLR 1 505 0 574 205 151 42 chr2 209305134 209305156 -43951427 - MER5A DNA MER1_type -167 22 4 196 341 59 15 chr2 209305431 209305566 -43951017 + L2 LINE L2 2542 2682 -632 1112 319 103 35 chr2 209306307 209307024 -43949559 - L3 LINE CR1 -248 1329 564 738 318 131 50 chr2 209307165 209307947 -43948636 - L2 LINE L2 -182 3090 2221 444 208 156 45 chr2 209307952 209308106 -43948477 - MER5B DNA MER1_type -3 175 5 502 223 54 0 chr2 209308379 209308509 -43948074 - MLT1F1 LTR MaLR -6 561 425 318 278 163 7 chr2 209308616 209308822 -43947761 - MLT1G1 LTR MaLR -298 257 42 336 70 0 0 chr2 209309105 209309148 -43947435 + LTR8 LTR ERV1 547 589 -102 2132 158 49 20 chr2 209310292 209310698 -43945885 + L1MB1 LINE L1 5746 6163 -5 262 406 29 6 chr2 209310856 209311026 -43945557 - MIR3 SINE MIR -34 174 1 310 309 0 10 chr2 209311045 209311142 -43945441 - MIR3 SINE MIR -2 206 111 810 291 109 5 chr2 209311539 209311907 -43944676 + LTR16B LTR ERVL 46 451 -13 27 0 0 0 chr2 209312111 209312138 -43944445 + AT_rich Low_complexity Low_complexity 1 27 0 195 129 0 0 chr2 209312273 209312304 -43944279 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 25 65 0 0 chr2 209313250 209313296 -43943287 + AT_rich Low_complexity Low_complexity 1 46 0 486 0 0 0 chr2 209313702 209313756 -43942827 + (TA)n Simple_repeat Simple_repeat 2 55 0 564 307 58 58 chr2 209313986 209314432 -43942151 + LTR33 LTR ERVL 18 463 -58 834 38 0 19 chr2 209315494 209315599 -43940984 - L1PA8 LINE L1 -6 6166 6064 185 145 274 81 chr2 209316340 209316402 -43940181 + MIR SINE MIR 183 256 -6 369 273 58 22 chr2 209316439 209316578 -43940005 - L2 LINE L2 -42 3271 3128 245 181 28 14 chr2 209316707 209316779 -43939804 + (TA)n Simple_repeat Simple_repeat 2 74 0 360 330 53 75 chr2 209317525 209317880 -43938703 + L2 LINE L2 2816 3160 -112 1687 139 13 46 chr2 209317880 209318182 -43938401 - AluJo SINE Alu -20 292 1 360 330 53 75 chr2 209318182 209318293 -43938290 + L2 LINE L2 3160 3272 0 198 0 0 0 chr2 209319691 209319713 -43936870 + (A)n Simple_repeat Simple_repeat 1 22 0 250 329 108 1 chr2 209320261 209320391 -43936192 + MIR SINE MIR 18 152 -61 1904 116 36 4 chr2 209320463 209320738 -43935845 + AluSx SINE Alu 1 284 -28 623 287 60 50 chr2 209321138 209321613 -43934970 - MLT1J2 LTR MaLR -23 461 1 183 279 23 0 chr2 209321638 209321681 -43934902 - MIR3 SINE MIR -16 192 149 333 252 66 33 chr2 209321689 209321840 -43934743 + MER112 DNA MER1_type 13 168 -92 1952 125 11 3 chr2 209321844 209322131 -43934452 - AluSx SINE Alu -16 296 8 23 54 0 0 chr2 209322300 209322337 -43934246 + AT_rich Low_complexity Low_complexity 1 37 0 565 341 77 29 chr2 209322893 209323242 -43933341 + L3 LINE CR1 301 666 -911 855 242 52 24 chr2 209323267 209323478 -43933105 - MIR SINE MIR -3 259 43 765 301 61 31 chr2 209323496 209323822 -43932761 + L3 LINE CR1 669 1004 -573 230 179 0 0 chr2 209323940 209323979 -43932604 + MIR3 SINE MIR 167 205 -3 203 340 152 11 chr2 209324032 209324223 -43932360 + L3 LINE CR1 1276 1493 -84 419 277 92 21 chr2 209324888 209325029 -43931554 - L3 LINE CR1 -12 1565 1415 442 279 97 6 chr2 209325376 209325541 -43931042 + MIR SINE MIR 12 191 -71 493 181 0 76 chr2 209325571 209325676 -43930907 + L2 LINE L2 3217 3313 0 619 114 0 0 chr2 209325856 209325944 -43930639 + HY4 scRNA scRNA 2 89 -4 207 69 0 0 chr2 209325951 209325980 -43930603 + (A)n Simple_repeat Simple_repeat 1 29 0 450 290 69 8 chr2 209379317 209379448 -43877135 + MIR SINE MIR 74 212 -50 1964 130 34 0 chr2 209379556 209379848 -43876735 + AluSq SINE Alu 1 302 -11 342 0 0 0 chr2 209379848 209379886 -43876697 + (TA)n Simple_repeat Simple_repeat 2 39 0 25 65 0 0 chr2 209380294 209380340 -43876243 + AT_rich Low_complexity Low_complexity 1 46 0 195 129 0 0 chr2 209381286 209381317 -43875266 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 27 0 0 0 chr2 209381452 209381479 -43875104 + AT_rich Low_complexity Low_complexity 1 27 0 810 291 109 5 chr2 209381683 209382051 -43874532 - LTR16B LTR ERVL -13 451 46 310 309 0 10 chr2 209382448 209382545 -43874038 + MIR3 SINE MIR 111 206 -2 262 406 29 6 chr2 209382564 209382734 -43873849 + MIR3 SINE MIR 1 174 -34 2132 158 49 20 chr2 209382892 209383298 -43873285 - L1MB1 LINE L1 -5 6163 5746 336 70 0 0 chr2 209384442 209384485 -43872098 - LTR8 LTR ERV1 -102 589 547 318 277 140 3 chr2 209384768 209384974 -43871609 + MLT1F1 LTR MaLR 42 276 -298 502 223 54 0 chr2 209385081 209385211 -43871372 + MLT1F1 LTR MaLR 425 561 -6 444 208 156 45 chr2 209385484 209385638 -43870945 + MER5B DNA MER1_type 5 175 -3 738 318 131 50 chr2 209385643 209386425 -43870158 + L2 LINE L2 2221 3090 -182 1112 319 103 35 chr2 209386566 209387283 -43869300 + L3 LINE CR1 564 1329 -248 196 341 59 15 chr2 209388024 209388159 -43868424 - L2 LINE L2 -632 2682 2542 574 205 151 42 chr2 209388434 209388456 -43868127 + MER5A DNA MER1_type 4 22 -167 2037 184 63 31 chr2 209388456 209388945 -43867638 - MLT1D LTR MaLR 0 505 1 574 205 151 42 chr2 209388945 209389088 -43867495 + MER5A DNA MER1_type 22 187 -2 259 300 0 0 chr2 209389876 209389946 -43866637 - L2 LINE L2 -2 3311 3242 21 0 0 0 chr2 209390225 209390246 -43866337 + AT_rich Low_complexity Low_complexity 1 21 0 474 244 125 23 chr2 209390488 209390664 -43865919 + L2 LINE L2 3119 3312 -1 568 340 57 5 chr2 209390935 209391144 -43865439 - MIR SINE MIR -10 252 33 225 325 167 0 chr2 209391270 209391384 -43865199 + L2 LINE L2 3127 3259 -13 297 242 59 85 chr2 209391714 209391867 -43864716 - L2 LINE L2 0 3313 3165 32 0 0 0 chr2 209393918 209393950 -43862633 + AT_rich Low_complexity Low_complexity 1 32 0 198 0 0 0 chr2 209394207 209394229 -43862354 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 234 91 0 0 chr2 209394828 209394861 -43861722 + (TA)n Simple_repeat Simple_repeat 2 34 0 206 350 110 10 chr2 209395953 209396053 -43860530 + L3b LINE CR1 1465 1574 -9 505 103 0 0 chr2 209396372 209396440 -43860143 + AluJ/FRAM SINE Alu 232 299 -13 1767 159 3 17 chr2 209396595 209396891 -43859692 + AluJb SINE Alu 9 300 -12 1550 153 58 52 chr2 209398172 209398480 -43858103 + AluJo SINE Alu 2 311 -1 22 0 0 0 chr2 209398575 209398597 -43857986 + AT_rich Low_complexity Low_complexity 1 22 0 208 67 0 44 chr2 209399489 209399534 -43857049 + (TTTAA)n Simple_repeat Simple_repeat 4 46 0 1692 171 0 4 chr2 209402108 209402382 -43854201 + AluJo SINE Alu 1 273 -39 338 0 24 0 chr2 209402394 209402436 -43854147 + (TAAA)n Simple_repeat Simple_repeat 1 43 0 835 171 43 37 chr2 209403528 209403692 -43852891 - FRAM SINE Alu -11 165 1 264 211 83 58 chr2 209403956 209404049 -43852534 + MIR3 SINE MIR 69 165 -43 930 224 129 89 chr2 209404056 209404809 -43851774 - MER20B DNA MER1_type 0 784 2 189 358 32 11 chr2 209404873 209404968 -43851615 - L2 LINE L2 -24 3289 3193 206 383 75 0 chr2 209405162 209405282 -43851301 - L2 LINE L2 -22 3250 3122 1952 144 10 13 chr2 209406072 209406370 -43850213 + AluJb SINE Alu 1 297 -15 1765 199 53 63 chr2 209406509 209407032 -43849551 - MER44D DNA MER2_type -1 604 32 240 367 0 0 chr2 209407215 209407294 -43849289 - MIR3 SINE MIR -14 194 116 1851 177 0 7 chr2 209408025 209408330 -43848253 + AluJo SINE Alu 4 306 -6 25 0 0 0 chr2 209408939 209408964 -43847619 + GC_rich Low_complexity Low_complexity 1 25 0 763 314 57 4 chr2 209409238 209409467 -43847116 + MIR SINE MIR 2 242 -20 295 277 69 119 chr2 209409476 209409678 -43846905 - L2 LINE L2 0 3313 3122 638 103 0 0 chr2 209409952 209410039 -43846544 - AluY SINE Alu -181 130 44 1805 176 7 0 chr2 209410139 209410435 -43846148 + AluJb SINE Alu 1 298 -14 751 106 0 0 chr2 209410937 209411050 -43845533 + L1MA3 LINE L1 6193 6305 0 335 130 70 0 chr2 209411124 209411224 -43845359 + (TA)n Simple_repeat Simple_repeat 2 108 0 1405 125 24 0 chr2 209411569 209411777 -43844806 + AluJb SINE Alu 87 299 -13 1583 318 112 29 chr2 209411817 209412870 -43843713 + L2 LINE L2 1774 2914 -400 324 266 101 0 chr2 209412872 209413011 -43843572 - LTR50 LTR ERVL 0 795 643 23 0 0 0 chr2 209413335 209413358 -43843225 + AT_rich Low_complexity Low_complexity 1 23 0 602 220 0 38 chr2 209413402 209413561 -43843022 - LTR41 LTR ERVL -620 153 1 320 356 8 99 chr2 209413651 209413904 -43842679 + L2 LINE L2 3004 3233 -39 971 267 108 7 chr2 209414146 209414403 -43842180 - L1ME4a LINE L1 -94 6027 5797 2291 124 0 0 chr2 209414403 209414710 -43841873 - AluSx SINE Alu -5 307 1 971 267 108 7 chr2 209414710 209414886 -43841697 - L1ME4a LINE L1 -324 5797 5550 231 250 44 0 chr2 209415680 209415748 -43840835 + L1ME LINE L1 5530 5600 -521 544 269 48 15 chr2 209416208 209416435 -43840148 + L1MEc LINE L1 1018 1214 -5332 551 241 13 70 chr2 209416478 209416784 -43839799 + L1MEc LINE L1 1391 1635 -4907 * 1354 248 84 11 chr2 209416782 209417318 -43839265 + L1MEc LINE L1 2888 3462 -3182 3226 218 148 22 chr2 209417367 209418745 -43837838 + L1MEc LINE L1 3839 5389 -1255 203 205 277 48 chr2 209419257 209419340 -43837243 - L2 LINE L2 0 3272 3171 1285 186 39 19 chr2 209419473 209419784 -43836799 - MER33 DNA MER1_type -1 323 7 2772 155 2 2 chr2 209420481 209420907 -43835676 + MSTB LTR MaLR 1 426 0 202 308 173 15 chr2 209421093 209421226 -43835357 + MER5A DNA MER1_type 36 189 0 304 258 157 0 chr2 209422533 209422622 -43833961 - MIR SINE MIR -69 139 37 570 233 64 109 chr2 209425103 209425460 -43831123 - MLT1K LTR MaLR -1 587 247 289 217 17 0 chr2 209426086 209426146 -43830437 - MER58 DNA MER1_type -2142 278 218 292 167 0 37 chr2 209426147 209426201 -43830382 - MER58 DNA MER1_type -163 52 1 1415 175 72 21 chr2 209428740 209429031 -43827552 + AluJo SINE Alu 1 306 -6 189 161 0 0 chr2 209429693 209429724 -43826859 - MER5B DNA MER1_type -60 118 88 1895 157 14 0 chr2 209429747 209430040 -43826543 + AluJo SINE Alu 1 297 -15 810 214 122 5 chr2 209430120 209430316 -43826267 + MER20 DNA MER1_type 1 219 0 1117 202 14 9 chr2 209431626 209431849 -43824734 + AluJb SINE Alu 72 295 -17 2032 126 0 0 chr2 209431854 209432166 -43824417 + AluSx SINE Alu 5 316 0 340 292 94 56 chr2 209433728 209433961 -43822622 + MIR SINE MIR 15 256 -6 219 288 0 0 chr2 209434177 209434236 -43822347 + CT-rich Low_complexity Low_complexity 3 61 0 374 292 33 8 chr2 209434312 209434432 -43822151 - MER5A DNA MER1_type -65 124 2 492 333 71 0 chr2 209434511 209434709 -43821874 - L2 LINE L2 -169 3103 2892 1687 169 0 27 chr2 209434731 209435026 -43821557 + AluJb SINE Alu 5 291 -21 185 136 0 45 chr2 209435596 209435640 -43820943 + (TTTTA)n Simple_repeat Simple_repeat 5 46 0 1033 73 0 0 chr2 209435663 209435787 -43820796 - AluSq/x SINE Alu -187 125 2 25 31 0 0 chr2 209436579 209436611 -43819972 + AT_rich Low_complexity Low_complexity 1 32 0 304 290 31 80 chr2 209438969 209439131 -43817452 - L2 LINE L2 -256 3057 2904 363 44 0 0 chr2 209440906 209440951 -43815632 + (CA)n Simple_repeat Simple_repeat 2 46 0 1245 159 81 78 chr2 209441634 209442005 -43814578 + L1MC5 LINE L1 6886 7257 -704 337 215 103 19 chr2 209441996 209442103 -43814480 - L1MC5 LINE L1 -591 7370 7255 * 1433 206 59 41 chr2 209442118 209442578 -43814005 + L1MC5 LINE L1 7268 7735 -226 217 158 0 0 chr2 209442983 209443021 -43813562 + MER5A DNA MER1_type 7 44 -145 222 37 0 0 chr2 209443426 209443453 -43813130 + (TTTTTG)n Simple_repeat Simple_repeat 2 28 0 246 354 0 0 chr2 209443638 209443734 -43812849 + MIR SINE MIR 73 168 -94 24 32 0 0 chr2 209444017 209444048 -43812535 + AT_rich Low_complexity Low_complexity 1 31 0 1956 94 0 23 chr2 209444154 209444419 -43812164 + AluY SINE Alu 1 259 -52 490 91 0 15 chr2 209444540 209444606 -43811977 + Alu SINE Alu 224 288 -22 2365 92 10 0 chr2 209444653 209444959 -43811624 - AluY SINE Alu -2 309 1 291 289 10 21 chr2 209446385 209446482 -43810101 + MIR SINE MIR 37 132 -76 1358 206 4 39 chr2 209446489 209446770 -43809813 + AluJo SINE Alu 9 279 -33 261 57 0 0 chr2 209446772 209446807 -43809776 + (TAA)n Simple_repeat Simple_repeat 1 35 0 271 292 0 0 chr2 209446808 209446880 -43809703 + MIR SINE MIR 159 230 -32 243 278 0 42 chr2 209447174 209447246 -43809337 + L2 LINE L2 3200 3268 -4 186 376 10 0 chr2 209447385 209447486 -43809097 - MIR SINE MIR -42 220 119 753 181 7 28 chr2 209448481 209448625 -43807958 - FLAM_C SINE Alu -1 142 2 982 292 48 16 chr2 209448983 209449298 -43807285 - MER102b DNA MER1_type -16 325 1 2221 93 7 0 chr2 209449600 209449891 -43806692 + AluY SINE Alu 1 293 -18 253 277 21 32 chr2 209451733 209451827 -43804756 - LTR67 LTR ERVL -1 556 464 288 0 0 0 chr2 209452195 209452227 -43804356 + (CA)n Simple_repeat Simple_repeat 2 33 0 187 299 45 0 chr2 209452482 209452549 -43804034 + L2 LINE L2 2600 2669 -645 401 287 134 46 chr2 209452795 209453011 -43803572 + MIR SINE MIR 13 247 -15 323 256 191 51 chr2 209454616 209454781 -43801802 - L1ME4a LINE L1 -216 5905 5764 1680 94 0 30 chr2 209454781 209455016 -43801567 + AluSx SINE Alu 59 286 -26 198 0 0 0 chr2 209455016 209455038 -43801545 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 323 256 191 51 chr2 209455038 209455086 -43801497 - L1ME4a LINE L1 -356 5765 5661 2366 105 0 0 chr2 209457565 209457871 -43798712 + AluSx SINE Alu 2 307 -5 1435 146 38 21 chr2 209458210 209458449 -43798134 - AluJb SINE Alu -69 243 1 424 306 0 0 chr2 209458950 209459048 -43797535 + MER115 DNA AcHobo 332 429 -264 1787 119 165 73 chr2 209459068 209459438 -43797145 - MER4A LTR ERV1 0 664 261 685 101 0 10 chr2 209459438 209459537 -43797046 - MER4A LTR ERV1 -566 98 1 288 209 75 0 chr2 209459537 209459597 -43796986 + Zaphod DNA AcHobo 3967 4031 0 543 259 97 22 chr2 209459761 209459946 -43796637 + MIR SINE MIR 64 262 0 1893 212 63 93 chr2 209460332 209461096 -43795487 - LTR1B LTR ERV1 -13 813 1 207 0 0 0 chr2 209461361 209461384 -43795199 + (A)n Simple_repeat Simple_repeat 1 23 0 333 182 52 13 chr2 209462621 209462698 -43793885 - MLT1K LTR MaLR -19 569 490 2096 125 13 0 chr2 209462742 209463047 -43793536 - AluSx SINE Alu -3 309 1 450 95 0 0 chr2 209464175 209464238 -43792345 - Alu SINE Alu -5 307 245 1735 149 47 4 chr2 209464240 209464515 -43792068 - AluJo SINE Alu -25 287 1 2491 45 0 0 chr2 209465537 209465824 -43790759 - AluY SINE Alu -24 287 1 225 0 0 0 chr2 209466466 209466491 -43790092 + (A)n Simple_repeat Simple_repeat 1 25 0 1972 156 0 28 chr2 209466586 209466907 -43789676 - AluJo SINE Alu 0 312 1 187 326 0 0 chr2 209467038 209467084 -43789499 + L2 LINE L2 3262 3307 -6 685 317 14 9 chr2 209467196 209467417 -43789166 + MIR SINE MIR 8 229 -33 823 227 134 94 chr2 209467428 209468159 -43788424 - LTR41 LTR ERVL -13 760 1 2267 86 10 0 chr2 209468191 209468482 -43788101 + AluSx SINE Alu 1 294 -18 816 228 89 20 chr2 209468586 209468788 -43787795 + MIR SINE MIR 7 222 -40 905 181 122 54 chr2 209469060 209469265 -43787318 + MER20 DNA MER1_type 1 219 0 760 84 11 0 chr2 209469399 209469494 -43787089 + AluSq/x SINE Alu 36 131 -181 1628 134 18 46 chr2 209471449 209471732 -43784851 + AluJo SINE Alu 21 295 -17 2304 139 67 5 chr2 209474881 209475270 -43781313 + MSTB LTR MaLR 1 413 -13 292 259 24 0 chr2 209475281 209475366 -43781217 - MER103 DNA DNA -30 136 50 1470 135 9 5 chr2 209476005 209476220 -43780363 - MER20 DNA MER1_type -3 216 1 931 245 30 25 chr2 209477383 209477620 -43778963 + MIR SINE MIR 14 251 -11 1555 130 67 10 chr2 209477913 209478213 -43778370 + L1MB5 LINE L1 5852 6168 -6 1509 173 144 0 chr2 209478535 209478882 -43777701 - L1ME1 LINE L1 -5 6161 5765 811 244 70 42 chr2 209478893 209479426 -43777157 - L1ME4a LINE L1 0 6121 5522 26 0 0 0 chr2 209479672 209479698 -43776885 + AT_rich Low_complexity Low_complexity 1 26 0 754 22 0 0 chr2 209479731 209479820 -43776763 - MER85 DNA T2_type -1 138 50 1874 95 0 0 chr2 209479828 209480059 -43776524 - AluSc SINE Alu -78 231 1 2037 114 11 4 chr2 209480334 209480636 -43775947 - AluSp SINE Alu 0 304 1 888 161 0 0 chr2 209480672 209480809 -43775774 - AluJo SINE Alu -38 274 138 370 229 82 16 chr2 209481000 209481122 -43775461 + MIR SINE MIR 84 213 -49 21 0 0 0 chr2 209481340 209481361 -43775222 + AT_rich Low_complexity Low_complexity 1 21 0 197 243 171 0 chr2 209482273 209482343 -43774240 - MIR3 SINE MIR -9 199 118 188 65 0 32 chr2 209482425 209482456 -43774127 + (TTTTC)n Simple_repeat Simple_repeat 2 31 0 186 211 0 0 chr2 209482471 209482509 -43774074 + MER5A DNA MER1_type 152 189 0 17364 29 0 1 chr2 209483297 209486141 -43770442 + L1PA3 LINE L1 3314 6151 -4 355 316 68 23 chr2 209486419 209486552 -43770031 - L2 LINE L2 0 3272 3134 2449 88 3 0 chr2 209486592 209486900 -43769683 + AluSp SINE Alu 1 309 -4 360 309 55 0 chr2 209487000 209487110 -43769473 + L2 LINE L2 3197 3312 -1 273 291 37 67 chr2 209487204 209487338 -43769245 + L2 LINE L2 3184 3313 0 2235 77 0 3 chr2 209488020 209488306 -43768277 + AluY SINE Alu 1 285 -26 800 299 21 16 chr2 209489098 209489292 -43767291 + MER91A DNA MER1_type 1 195 -1 464 281 111 45 chr2 209491250 209491485 -43765098 + MIR SINE MIR 20 261 -1 832 116 0 65 chr2 209491656 209491794 -43764789 - AluJo SINE Alu -173 129 1 1927 110 48 0 chr2 209491915 209492210 -43764373 - AluSx SINE Alu 0 308 1 496 294 52 65 chr2 209492886 209493134 -43763449 - MIR SINE MIR -2 260 16 208 325 63 8 chr2 209493416 209493542 -43763041 + MER5A DNA MER1_type 1 133 -56 201 39 0 0 chr2 209493997 209494023 -43762560 + (CACGT)n Simple_repeat Simple_repeat 1 26 0 247 270 113 43 chr2 209494154 209494269 -43762314 - MIR SINE MIR -67 141 19 300 294 12 0 chr2 209494450 209494535 -43762048 - MIR SINE MIR -10 252 167 1083 184 136 18 chr2 209494876 209495148 -43761435 - MER58B DNA MER1_type -37 304 1 853 299 62 48 chr2 209495214 209495696 -43760887 - L2 LINE L2 -279 3034 2544 649 171 101 0 chr2 209495803 209495932 -43760651 - LTR16B LTR ERVL -315 149 8 3654 326 123 15 chr2 209495938 209497881 -43758702 - L2 LINE L2 -820 2494 343 1056 130 86 0 chr2 209497903 209498065 -43758518 + AluSg/x SINE Alu 134 309 -3 249 359 36 21 chr2 209498095 209498287 -43758296 - L2 LINE L2 -3032 282 88 180 111 0 0 chr2 209499402 209499429 -43757154 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 1967 107 4 4 chr2 209499429 209499690 -43756893 - AluSx SINE Alu -51 261 1 1165 205 144 88 chr2 209499855 209500342 -43756241 - MLT2B2 LTR ERVL -1 514 1 694 278 71 61 chr2 209500776 209501433 -43755150 + HAL1b LINE L1 98 766 -582 2773 89 0 3 chr2 209501433 209501794 -43754789 + THE1B LTR MaLR 1 360 -4 694 278 71 61 chr2 209501794 209501894 -43754689 + HAL1b LINE L1 766 863 -485 26 30 0 0 chr2 209502040 209502073 -43754510 + AT_rich Low_complexity Low_complexity 1 33 0 2025 125 4 4 chr2 209502236 209502515 -43754068 + AluSq SINE Alu 15 293 -20 253 265 43 8 chr2 209502601 209502718 -43753865 + L1P LINE L1 2277 2397 -3749 3836 132 8 7 chr2 209502956 209503556 -43753027 - MER7C DNA MER2_type 0 602 2 1863 114 3 27 chr2 209503954 209504308 -43752275 - MER4A LTR ERV1 0 664 261 479 115 52 31 chr2 209504308 209504404 -43752179 - MER4A LTR ERV1 -566 98 1 747 154 0 8 chr2 209505888 209506116 -43750467 - FLAM_C SINE Alu 0 227 1 648 203 70 123 chr2 209506411 209506638 -43749945 + MIR SINE MIR 38 252 -10 510 261 104 106 chr2 209506752 209506856 -43749727 + LTR67 LTR ERVL 3 106 -451 207 69 0 0 chr2 209506856 209506885 -43749698 + (CAT)n Simple_repeat Simple_repeat 1 29 0 510 261 104 106 chr2 209506885 209507336 -43749247 + LTR67 LTR ERVL 106 557 0 2714 26 0 0 chr2 209508026 209508337 -43748246 - AluY SINE Alu 0 311 1 434 259 60 0 chr2 209508521 209508637 -43747946 - MIR SINE MIR -77 185 63 232 322 78 9 chr2 209510072 209510187 -43746396 + L2 LINE L2 3188 3310 -3 407 314 123 29 chr2 209510447 209510671 -43745912 - MIR SINE MIR -16 246 5 288 325 121 13 chr2 209511076 209511233 -43745350 - L3 LINE CR1 -32 1545 1372 3763 248 88 40 chr2 209511245 209512741 -43743842 - L2 LINE L2 -2 3311 1738 230 171 0 0 chr2 209512791 209512832 -43743751 + L2 LINE L2 2932 2972 -300 3866 246 175 22 chr2 209512871 209513065 -43743518 - L2 LINE L2 0 3313 3150 1951 118 3 21 chr2 209513065 209513398 -43743185 - AluSx SINE Alu 0 328 1 3866 246 175 22 chr2 209513398 209514857 -43741726 - L2 LINE L2 -163 3150 1391 927 238 160 22 chr2 209514857 209515214 -43741369 - L2 LINE L2 -2672 642 237 738 225 45 30 chr2 209515215 209515637 -43740946 - MLT1D LTR MaLR 0 505 1 442 251 49 76 chr2 209515637 209515860 -43740723 - L2 LINE L2 -3089 225 9 218 299 98 92 chr2 209516143 209516317 -43740266 + L2 LINE L2 3048 3222 -50 273 57 0 0 chr2 209517084 209517119 -43739464 + (TG)n Simple_repeat Simple_repeat 2 36 0 21 36 0 0 chr2 209517692 209517720 -43738863 + AT_rich Low_complexity Low_complexity 1 28 0 251 111 0 22 chr2 209519395 209519440 -43737143 + (TATG)n Simple_repeat Simple_repeat 1 44 0 494 277 98 16 chr2 209520507 209520763 -43735820 - L1MC4a LINE L1 -1816 5992 5716 2607 259 220 29 chr2 209520784 209522184 -43734399 + L2 LINE L2 1612 3295 -18 934 292 96 67 chr2 209522259 209523130 -43733453 - L1M4 LINE L1 -2163 3983 3087 3327 221 92 35 chr2 209523162 209524254 -43732329 - L1MDa LINE L1 -4768 1772 618 520 211 24 24 chr2 209524269 209524392 -43732191 + MER74B LTR ERVL 71 193 -429 353 109 0 0 chr2 209524392 209524447 -43732136 - MSTD LTR MaLR 0 396 342 1377 184 159 3 chr2 209524489 209524798 -43731785 - MSTD LTR MaLR -39 357 1 1184 234 45 36 chr2 209524798 209525154 -43731429 + MER74B LTR ERVL 189 547 -75 286 202 0 15 chr2 209525323 209525388 -43731195 - L1MDa LINE L1 -5887 653 425 * 766 167 167 50 chr2 209525369 209525608 -43730975 - L1M4 LINE L1 -1255 4891 4625 228 236 42 0 chr2 209525912 209525984 -43730599 + L1ME4a LINE L1 5960 6034 -87 2459 76 0 0 chr2 209526593 209526894 -43729689 + AluY SINE Alu 1 301 -10 208 314 14 14 chr2 209526963 209527033 -43729550 - MIR3 SINE MIR -40 168 99 2463 213 50 52 chr2 209527470 209527852 -43728731 - L1ME3A LINE L1 -66 6038 5657 2023 157 0 0 chr2 209527852 209528152 -43728431 - AluSx SINE Alu -12 300 1 2463 213 50 52 chr2 209528152 209528263 -43728320 - L1ME3A LINE L1 -447 5657 5547 396 0 0 0 chr2 209528263 209528307 -43728276 + (TCTA)n Simple_repeat Simple_repeat 2 45 0 2463 213 50 52 chr2 209528307 209528569 -43728014 - L1ME3A LINE L1 -557 5547 5283 1973 164 0 0 chr2 209528584 209528876 -43727707 - AluJb SINE Alu -19 293 2 5628 202 56 13 chr2 209529056 209529104 -43727479 + L1MA4 LINE L1 6 50 -6062 243 0 0 0 chr2 209529104 209529131 -43727452 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 5628 202 56 13 chr2 209529131 209529760 -43726823 + L1MA4 LINE L1 50 650 -5462 1491 89 0 0 chr2 209529760 209529951 -43726632 + AluY SINE Alu 119 309 -2 5628 202 56 13 chr2 209529951 209531240 -43725343 + L1MA4 LINE L1 650 2047 -4065 13339 174 55 8 chr2 209531240 209532545 -43724038 + L1MA4 LINE L1 2332 3574 -2754 1584 160 9 88 chr2 209532545 209532864 -43723719 + AluJo SINE Alu 1 294 -18 13339 174 55 8 chr2 209532864 209534573 -43722010 + L1MA4 LINE L1 3574 5488 -840 2631 122 75 6 chr2 209534574 209535051 -43721532 + L1MA4 LINE L1 5694 6203 -279 253 145 65 0 chr2 209535063 209535125 -43721458 + L1MB3 LINE L1 6110 6175 -8 1034 268 99 23 chr2 209535158 209535732 -43720851 - L1ME3A LINE L1 -1072 5008 4391 461 235 186 0 chr2 209535802 209535904 -43720679 - FLAM_A SINE Alu -12 121 1 3404 121 7 6 chr2 209535964 209536510 -43720073 - MER41B LTR ERV1 -88 547 1 12075 110 16 10 chr2 209536521 209538737 -43717846 - MER41B-int LTR ERV1 -5 6091 4096 3500 139 19 34 chr2 209538728 209539518 -43717065 - MER41B-int LTR ERV1 -3014 3357 2167 * 3496 117 17 21 chr2 209539520 209539532 -43717051 - MER41B-int LTR ERV1 -3918 2028 2017 2365 91 0 3 chr2 209539532 209539830 -43716753 - AluSq SINE Alu -10 303 7 3496 117 17 21 chr2 209539830 209540391 -43716192 - MER41B-int LTR ERV1 -3929 2017 1457 4083 132 14 5 chr2 209540410 209541046 -43715537 - MER41B-int LTR ERV1 -5304 642 1 879 126 46 0 chr2 209541046 209541197 -43715386 - MER41B LTR ERV1 0 554 397 1642 236 117 111 chr2 209541198 209541365 -43715218 - L1ME3A LINE L1 -1772 4308 4144 186 43 0 0 chr2 209541365 209541388 -43715195 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1642 236 117 111 chr2 209541388 209541436 -43715147 - L1ME3A LINE L1 -1936 4144 4098 2347 98 0 3 chr2 209541436 209541733 -43714850 - AluSc SINE Alu -13 296 1 1642 236 117 111 chr2 209541733 209542376 -43714207 - L1ME3A LINE L1 -1982 4098 3460 2113 132 0 0 chr2 209542376 209542671 -43713912 - AluSq SINE Alu -16 297 3 1642 236 117 111 chr2 209542671 209543167 -43713416 - L1ME3A LINE L1 -2620 3460 2969 567 227 42 0 chr2 209543167 209543286 -43713297 - FLAM_A SINE Alu -9 133 10 1642 236 117 111 chr2 209543286 209543930 -43712653 - L1ME3A LINE L1 -3111 2969 2176 1389 260 92 5 chr2 209544013 209544621 -43711962 - L1M4 LINE L1 -2155 3991 3331 * 39009 66 2 5 chr2 209544617 209550787 -43705796 - L1PA5 LINE L1 -2 6152 3 461 228 102 9 chr2 209550787 209551002 -43705581 - L1M4 LINE L1 -2806 3340 3106 3962 176 15 6 chr2 209551049 209551828 -43704755 - L1MB7 LINE L1 -40 6144 5359 1255 230 124 25 chr2 209552027 209552470 -43704113 - L1ME3A LINE L1 -5578 492 6 34 55 0 0 chr2 209552563 209552618 -43703965 + AT_rich Low_complexity Low_complexity 1 55 0 957 262 100 37 chr2 209552980 209553331 -43703252 + L2 LINE L2 2605 2977 -337 2459 86 3 0 chr2 209553349 209553653 -43702930 - AluSx SINE Alu -7 305 1 473 312 41 41 chr2 209554117 209554338 -43702245 + MIR SINE MIR 18 238 -24 223 272 11 39 chr2 209554781 209554903 -43701680 + CT-rich Low_complexity Low_complexity 1 118 0 234 0 0 0 chr2 209555264 209555290 -43701293 + (CAA)n Simple_repeat Simple_repeat 2 27 0 476 325 38 0 chr2 209555524 209555681 -43700902 - MLT1J LTR MaLR -117 394 232 562 346 63 27 chr2 209556431 209556841 -43699742 - L2 LINE L2 -576 2738 2314 203 152 0 0 chr2 209556856 209556889 -43699694 + (CA)n Simple_repeat Simple_repeat 1 33 0 377 283 111 20 chr2 209558713 209558911 -43697672 - LTR16B LTR ERVL 0 464 249 1368 266 48 22 chr2 209559118 209559532 -43697051 - MLT1J LTR MaLR -85 426 2 389 261 54 0 chr2 209560126 209560218 -43696365 - L2 LINE L2 0 3272 3176 591 175 140 0 chr2 209560293 209560407 -43696176 + FLAM_A SINE Alu 1 130 -3 386 270 92 0 chr2 209560488 209560640 -43695943 + L2 LINE L2 2593 2758 -556 383 257 62 19 chr2 209560661 209560841 -43695742 - L1M4c LINE L1 -4983 1445 1239 374 258 26 45 chr2 209561591 209561746 -43694837 - PABL_B LTR ERV1 -515 152 1 338 262 126 0 chr2 209561842 209561945 -43694638 + MIR SINE MIR 30 145 -63 1749 176 10 7 chr2 209562527 209562828 -43693755 + AluJb SINE Alu 1 302 -10 263 211 0 14 chr2 209562829 209562900 -43693683 + GA-rich Low_complexity Low_complexity 4 73 0 25 0 0 0 chr2 209562918 209562943 -43693640 + AT_rich Low_complexity Low_complexity 1 25 0 2215 112 0 7 chr2 209563164 209563458 -43693125 + AluSc SINE Alu 1 292 -17 25 0 0 0 chr2 209563858 209563883 -43692700 + AT_rich Low_complexity Low_complexity 1 25 0 525 265 96 24 chr2 209563939 209564105 -43692478 - MER5B DNA MER1_type 0 178 1 352 237 237 0 chr2 209564208 209564305 -43692278 - MER5A DNA MER1_type -12 177 58 821 136 0 21 chr2 209564472 209564612 -43691971 - AluSg/x SINE Alu 0 310 174 661 290 40 35 chr2 209564649 209564849 -43691734 - MIR SINE MIR -1 261 61 271 246 14 0 chr2 209564849 209564918 -43691665 - L1MC5 LINE L1 -385 7576 7507 269 263 32 32 chr2 209565492 209565587 -43690996 - MER5A DNA MER1_type -1 188 94 1997 181 64 45 chr2 209565826 209566341 -43690242 + L1MA10 LINE L1 5810 6334 0 2009 146 0 7 chr2 209566351 209566652 -43689931 + AluSx SINE Alu 1 299 -13 203 338 38 12 chr2 209567276 209567356 -43689227 + L2 LINE L2 3025 3106 -166 193 290 252 0 chr2 209567432 209567539 -43689044 + L2 LINE L2 3139 3272 0 31 82 0 0 chr2 209567643 209567716 -43688867 + AT_rich Low_complexity Low_complexity 1 73 0 25 75 0 0 chr2 209570125 209570178 -43686405 + AT_rich Low_complexity Low_complexity 1 53 0 4598 106 8 3 chr2 209570458 209571191 -43685392 - L1P LINE L1 -762 5384 4648 585 188 23 23 chr2 209571764 209571892 -43684691 + FRAM SINE Alu 48 175 -1 1496 179 39 14 chr2 209571960 209572239 -43684344 - AluJo SINE Alu -26 286 1 1987 98 31 3 chr2 209572350 209572636 -43683947 - AluY SINE Alu -17 294 1 1365 170 104 2 chr2 209573261 209573592 -43682991 + MER66A LTR ERV1 27 475 -3 1079 198 4 83 chr2 209573759 209573870 -43682713 + AluJo SINE Alu 28 109 -203 2190 109 0 3 chr2 209573870 209574163 -43682420 + AluSc SINE Alu 1 292 -17 1079 198 4 83 chr2 209574163 209574304 -43682279 + AluJo SINE Alu 109 260 -52 2423 59 3 13 chr2 209575015 209575320 -43681263 + AluY SINE Alu 1 302 -9 2200 109 3 3 chr2 209575353 209575647 -43680936 + AluSx SINE Alu 5 298 -14 1544 155 8 23 chr2 209575647 209575912 -43680671 + AluY SINE Alu 1 261 -50 223 157 14 57 chr2 209577431 209577501 -43679082 + T-rich Low_complexity Low_complexity 5 71 0 673 273 33 16 chr2 209578026 209578268 -43678315 + MER46C DNA MER2_type 81 326 -12 21 0 0 0 chr2 209580182 209580203 -43676380 + AT_rich Low_complexity Low_complexity 1 21 0 635 252 45 56 chr2 209580855 209581121 -43675462 + MLT1J2 LTR MaLR 1 263 -187 1060 220 0 0 chr2 209581122 209581331 -43675252 + MER3 DNA MER1_type 1 209 0 2215 88 10 29 chr2 209581961 209582268 -43674315 + AluSx SINE Alu 3 303 -9 314 261 104 24 chr2 209584823 209585004 -43671579 - L1 LINE L1 -2945 3201 3015 551 223 43 7 chr2 209586222 209586361 -43670222 - MIR SINE MIR -83 179 36 199 376 0 30 chr2 209586942 209587043 -43669540 - MIR SINE MIR -122 140 43 288 0 0 0 chr2 209587212 209587244 -43669339 + (TG)n Simple_repeat Simple_repeat 1 32 0 442 200 20 13 chr2 209587247 209587397 -43669186 + (TA)n Simple_repeat Simple_repeat 1 151 0 582 99 0 22 chr2 209588479 209588570 -43668013 + AluSg/x SINE Alu 206 294 -16 1685 170 58 4 chr2 209589075 209589351 -43667232 + AluJb SINE Alu 1 291 -21 31 26 0 0 chr2 209589370 209589408 -43667175 + AT_rich Low_complexity Low_complexity 1 38 0 553 258 98 12 chr2 209589627 209589790 -43666793 - MIR SINE MIR -51 211 35 624 112 0 0 chr2 209590986 209591084 -43665499 - L1PB1 LINE L1 0 6151 6054 324 238 0 0 chr2 209591092 209591176 -43665407 + (TA)n Simple_repeat Simple_repeat 1 84 0 4215 176 19 11 chr2 209591177 209592720 -43663863 - L1PB1 LINE L1 -361 5790 4234 1861 137 13 36 chr2 209592854 209593160 -43663423 + AluSx SINE Alu 1 299 -13 2089 111 7 0 chr2 209593651 209593930 -43662653 + AluSx SINE Alu 15 295 -17 346 313 108 64 chr2 209594080 209594329 -43662254 + L3 LINE CR1 810 1069 -508 514 306 126 45 chr2 209594775 209595377 -43661206 + L1M4 LINE L1 2383 3033 -3113 1516 183 52 17 chr2 209595407 209595696 -43660887 - AluJb SINE Alu -13 299 1 307 265 50 62 chr2 209595751 209596215 -43660368 + L1M4 LINE L1 3081 3538 -2608 29 94 0 0 chr2 209596263 209596348 -43660235 + AT_rich Low_complexity Low_complexity 1 85 0 244 316 19 32 chr2 209596391 209596549 -43660034 + L1M4 LINE L1 3656 3811 -2335 904 255 36 61 chr2 209596719 209597080 -43659503 + L1MCa LINE L1 132 483 -5943 2159 104 0 29 chr2 209597080 209597388 -43659195 + AluSx SINE Alu 1 299 -13 395 284 101 65 chr2 209598068 209598423 -43658160 + L1M4 LINE L1 4316 4683 -1463 5157 98 1 0 chr2 209598799 209599562 -43657021 - L1P LINE L1 -1619 4527 3764 5942 66 0 5 chr2 209599562 209600331 -43656252 + L1PA8 LINE L1 5393 6160 -12 1089 271 56 45 chr2 209600539 209601022 -43655561 + L2 LINE L2 2819 3306 -7 262 231 110 22 chr2 209601014 209601105 -43655478 - MIR SINE MIR -73 189 91 * 182 211 158 0 chr2 209601234 209601291 -43655292 - MIR SINE MIR -73 189 124 518 221 67 0 chr2 209601327 209601476 -43655107 - MER69A DNA AcHobo 0 177 19 1578 133 23 91 chr2 209601623 209601932 -43654651 - AluJo SINE Alu -16 296 9 259 212 169 43 chr2 209602170 209602304 -43654279 + MIR3 SINE MIR 28 179 -29 319 283 181 6 chr2 209603128 209603305 -43653278 - L1M4 LINE L1 -2866 3280 3073 431 250 8 23 chr2 209603345 209603473 -43653110 - AluSq/x SINE Alu -179 134 9 363 218 39 0 chr2 209603712 209603790 -43652793 + MIR SINE MIR 90 170 -92 380 191 9 52 chr2 209603791 209603906 -43652677 - MLT1B LTR MaLR 0 390 281 267 31 0 0 chr2 209604493 209604525 -43652058 + (TG)n Simple_repeat Simple_repeat 1 32 0 180 97 0 0 chr2 209604525 209604556 -43652027 + (GA)n Simple_repeat Simple_repeat 2 32 0 636 310 34 50 chr2 209604748 209604987 -43651596 + MIR SINE MIR 8 242 -20 310 299 172 0 chr2 209605043 209605217 -43651366 - MIR SINE MIR -56 206 3 10551 126 26 20 chr2 209606796 209609506 -43647077 + L1PA8 LINE L1 3379 6091 -81 273 227 23 45 chr2 209609516 209609648 -43646935 + C-rich Low_complexity Low_complexity 5 133 0 180 135 0 0 chr2 209609665 209609702 -43646881 + (CCCCCA)n Simple_repeat Simple_repeat 2 38 0 180 366 56 0 chr2 209610710 209610781 -43645802 - L2 LINE L2 -206 3066 2992 201 250 36 18 chr2 209611168 209611224 -43645359 + L2 LINE L2 3252 3308 -5 376 254 68 79 chr2 209612151 209612479 -43644104 + L1M4 LINE L1 3073 3317 -2829 205 288 12 25 chr2 209613447 209613527 -43643056 - MER5A DNA MER1_type -103 86 8 280 222 90 18 chr2 209613574 209613723 -43642860 + L1MC4 LINE L1 7094 7250 -737 1687 194 14 7 chr2 209614007 209614296 -43642287 - AluJo SINE Alu -21 291 1 225 0 0 0 chr2 209616471 209616496 -43640087 + (A)n Simple_repeat Simple_repeat 1 25 0 1903 129 52 0 chr2 209616791 209616956 -43639627 - AluSx SINE Alu -11 301 113 183 42 0 0 chr2 209616956 209616980 -43639603 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1903 129 52 0 chr2 209616980 209617100 -43639483 - AluSx SINE Alu -199 113 1 352 232 9 27 chr2 209620478 209620590 -43635993 - L1MC5 LINE L1 -44 7917 7808 246 339 77 22 chr2 209621816 209621999 -43634584 - MLT1K LTR MaLR -214 374 182 542 271 102 11 chr2 209622934 209623111 -43633472 - MIR SINE MIR -4 258 66 530 264 111 38 chr2 209623675 209623910 -43632673 - MIR SINE MIR -6 256 5 426 309 0 0 chr2 209624570 209624735 -43631848 + T-rich Low_complexity Low_complexity 1 165 0 294 272 141 49 chr2 209625038 209625222 -43631361 + MIR SINE MIR 60 260 -2 256 350 95 22 chr2 209625330 209625467 -43631116 + MER5A DNA MER1_type 43 189 0 1072 207 28 0 chr2 209625792 209626005 -43630578 + AluJo SINE Alu 2 220 -92 243 0 0 0 chr2 209626039 209626066 -43630517 + (A)n Simple_repeat Simple_repeat 1 27 0 1745 164 21 0 chr2 209626069 209626355 -43630228 + AluSx SINE Alu 1 292 -20 571 75 21 11 chr2 209626358 209626452 -43630131 + (GGAA)n Simple_repeat Simple_repeat 1 95 0 1325 89 42 0 chr2 209626657 209626848 -43629735 + L1PA11 LINE L1 5975 6173 -1 208 227 109 55 chr2 209626973 209627083 -43629500 - MIR SINE MIR -59 203 88 380 133 105 38 chr2 209627965 209628070 -43628513 - L1MDa LINE L1 -4045 2495 2384 2951 207 44 49 chr2 209628407 209629709 -43626874 - L1MDa LINE L1 -4826 1714 15 778 178 7 0 chr2 209630245 209630380 -43626203 + FRAM SINE Alu 35 170 -6 223 357 54 8 chr2 209631143 209631272 -43625311 + MIR3 SINE MIR 35 169 -39 2381 113 0 0 chr2 209631363 209631674 -43624909 - AluSx SINE Alu -1 311 1 1983 170 0 3 chr2 209632495 209632807 -43623776 - AluJo SINE Alu -1 311 1 2094 124 3 0 chr2 209632834 209633150 -43623433 - AluSx SINE Alu 0 317 1 363 71 0 9 chr2 209633664 209633718 -43622865 + AluSg/x SINE Alu 206 250 -52 1880 153 18 0 chr2 209633881 209634163 -43622420 + AluJo SINE Alu 1 287 -25 244 171 0 0 chr2 209635435 209635476 -43621107 + Alu SINE Alu 6 46 -253 1688 187 14 0 chr2 209635518 209635807 -43620776 - AluSx SINE Alu -19 293 1 29 0 0 0 chr2 209635807 209635836 -43620747 + AT_rich Low_complexity Low_complexity 1 29 0 2127 76 41 28 chr2 209635836 209636127 -43620456 + AluYa5 SINE Alu 1 295 -16 1254 126 0 0 chr2 209636209 209636376 -43620207 + AluSq SINE Alu 129 295 -18 21 0 0 0 chr2 209636470 209636491 -43620092 + AT_rich Low_complexity Low_complexity 1 21 0 675 311 181 8 chr2 209636513 209636873 -43619710 - HAL1 LINE L1 -1739 768 347 453 130 0 13 chr2 209636885 209636962 -43619621 - L1MC4 LINE L1 0 8042 7967 212 277 80 58 chr2 209636971 209637108 -43619475 - MER5B DNA MER1_type -37 141 2 298 277 77 46 chr2 209637141 209637271 -43619312 - L2 LINE L2 0 3313 3180 189 0 0 0 chr2 209637706 209637727 -43618856 + (ATTG)n Simple_repeat Simple_repeat 2 22 0 2206 106 0 3 chr2 209637727 209638011 -43618572 - AluSc SINE Alu -26 283 1 389 222 176 0 chr2 209638352 209638460 -43618123 - L2 LINE L2 -4 3309 3183 1574 193 30 7 chr2 209638480 209638785 -43617798 - AluJo SINE Alu 0 312 1 1421 210 11 4 chr2 209639149 209639421 -43617162 - AluSx SINE Alu -37 275 2 1937 131 47 3 chr2 209639449 209639746 -43616837 + AluSx SINE Alu 1 310 -2 2117 202 113 35 chr2 209639887 209640437 -43616146 - MLT1E LTR MaLR 0 593 1 1676 182 7 24 chr2 209640735 209641031 -43615552 - AluJo SINE Alu -3 309 19 368 43 0 0 chr2 209641193 209641240 -43615343 - AluY SINE Alu -255 47 1 2034 151 0 0 chr2 209641302 209641594 -43614989 + AluSx SINE Alu 1 292 -20 180 158 0 0 chr2 209642120 209642158 -43614425 + (TATG)n Simple_repeat Simple_repeat 1 38 0 1703 171 3 28 chr2 209642161 209642448 -43614135 - AluJo SINE Alu -32 280 1 758 189 0 8 chr2 209642450 209642582 -43614001 - FLAM_A SINE Alu -2 131 1 1276 241 83 45 chr2 209642906 209643333 -43613250 - MER77 LTR ERV1 -1 604 182 2160 154 5 22 chr2 209643498 209643869 -43612714 + MER47A DNA MER2_type 2 366 0 1173 198 53 24 chr2 209644366 209644613 -43611970 - MER21-int LTR ERV1 -55 4136 3883 2013 111 10 42 chr2 209644624 209644930 -43611653 + AluSx SINE Alu 2 297 -15 2148 117 17 3 chr2 209644930 209645229 -43611354 + AluSg SINE Alu 1 304 -6 768 99 0 0 chr2 209645229 209645330 -43611253 + AluSg/x SINE Alu 196 296 -16 1418 134 22 13 chr2 209645350 209645582 -43611001 + MER50 LTR ERV1 1 234 -500 * 1792 112 29 29 chr2 209645580 209645858 -43610725 + MER50 LTR ERV1 433 710 -24 2194 101 3 3 chr2 209646006 209646293 -43610290 - AluSp SINE Alu -26 287 1 361 237 271 11 chr2 209646448 209646625 -43609958 - MIR SINE MIR -25 237 15 344 243 118 35 chr2 209646709 209646747 -43609836 + LTR38 LTR ERV1 1 34 -522 2400 74 13 3 chr2 209646747 209647045 -43609538 - AluSc SINE Alu -8 301 1 344 243 118 35 chr2 209647045 209647150 -43609433 + LTR38 LTR ERV1 34 156 -400 1325 172 46 67 chr2 209647175 209647460 -43609123 - AluJb SINE Alu -33 279 1 1404 217 71 16 chr2 209647463 209647841 -43608742 + LTR38B LTR ERV1 212 610 0 1280 170 34 0 chr2 209647841 209648076 -43608507 + L1PA16 LINE L1 5923 6165 -1 1086 83 0 0 chr2 209648104 209648237 -43608346 + AluSq/x SINE Alu 1 133 -180 4083 198 70 16 chr2 209648426 209650339 -43606244 - L1PBa LINE L1 -4696 2167 6 250 299 56 21 chr2 209652147 209652291 -43604292 + MIR3 SINE MIR 33 181 -27 907 133 8 0 chr2 209653509 209653637 -43602946 + AluJo SINE Alu 6 134 -178 400 262 154 23 chr2 209653637 209653851 -43602732 - MIR SINE MIR 0 262 21 415 282 24 0 chr2 209654180 209654304 -43602279 - MIR SINE MIR -88 174 48 3143 124 53 12 chr2 209654395 209654888 -43601695 + Tigger1 DNA MER2_type 1 513 -1905 476 30 15 0 chr2 209654888 209654955 -43601628 + AluY SINE Alu 242 309 -3 1767 142 86 10 chr2 209654960 209655263 -43601320 + Tigger1 DNA MER2_type 2078 2403 -15 193 282 84 14 chr2 209655318 209655389 -43601194 + L2 LINE L2 3196 3271 -1 181 175 0 50 chr2 209655876 209655916 -43600667 - L2 LINE L2 -4 3268 3231 241 284 83 9 chr2 209656307 209656416 -43600167 - MER94 DNA DNA -1 133 17 1572 178 22 41 chr2 209657763 209657887 -43598696 + AluJb SINE Alu 1 126 -186 234 0 0 0 chr2 209657887 209657913 -43598670 + (TA)n Simple_repeat Simple_repeat 2 27 0 1572 178 22 41 chr2 209657913 209658103 -43598480 + AluJb SINE Alu 126 309 -3 600 266 146 43 chr2 209658616 209659081 -43597502 - L1ME4a LINE L1 -188 5933 5382 378 61 0 0 chr2 209660508 209660557 -43596026 + (CA)n Simple_repeat Simple_repeat 1 49 0 22 0 0 0 chr2 209660688 209660710 -43595873 + AT_rich Low_complexity Low_complexity 1 22 0 285 246 53 35 chr2 209662702 209662816 -43593767 + L1ME LINE L1 5409 5524 -642 292 108 0 0 chr2 209664144 209664181 -43592402 - tRNA-Arg-AGA tRNA tRNA -38 38 2 360 43 0 0 chr2 209664249 209664295 -43592288 + (CA)n Simple_repeat Simple_repeat 2 47 0 273 98 0 0 chr2 209664295 209664336 -43592247 + (TC)n Simple_repeat Simple_repeat 2 42 0 2004 134 3 3 chr2 209664841 209665146 -43591437 - AluSx SINE Alu 0 305 1 1533 220 55 91 chr2 209665525 209666085 -43590498 - MLT1F LTR MaLR -2 540 1 2144 116 0 0 chr2 209666157 209666441 -43590142 - AluSx SINE Alu -16 296 13 340 304 126 5 chr2 209667948 209668139 -43588444 + MER102b DNA MER1_type 128 341 0 23 0 0 0 chr2 209668809 209668832 -43587751 + AT_rich Low_complexity Low_complexity 1 23 0 2440 81 0 10 chr2 209668832 209669130 -43587453 - AluSp SINE Alu -18 295 1 200 227 13 40 chr2 209669874 209669883 -43586700 + (TA)n Simple_repeat Simple_repeat 1 9 -64 2068 119 3 26 chr2 209669883 209670185 -43586398 + AluSx SINE Alu 1 295 -17 200 227 13 40 chr2 209670185 209670250 -43586333 + (TA)n Simple_repeat Simple_repeat 9 73 0 718 154 70 0 chr2 209671929 209672085 -43584498 + L1MB7 LINE L1 5171 5337 -809 270 133 0 0 chr2 209672073 209672118 -43584465 - L1M1 LINE L1 -662 5638 5594 * 480 71 179 0 chr2 209672117 209672201 -43584382 + L1MA4A LINE L1 6198 6296 -7 4189 168 62 11 chr2 209672207 209673029 -43583554 + L1MB7 LINE L1 5321 6184 0 898 262 145 32 chr2 209673230 209673829 -43582754 - L2 LINE L2 -2 3311 2644 433 292 181 61 chr2 209673978 209674615 -43581968 + L2 LINE L2 2259 2971 -343 1407 320 95 39 chr2 209675009 209675860 -43580723 + ERVL LTR ERVL 3776 4674 -1090 524 262 130 18 chr2 209676001 209676443 -43580140 + L1ME LINE L1 5282 5794 -327 470 184 163 54 chr2 209676443 209676582 -43580001 - MIR SINE MIR -4 258 101 611 89 0 0 chr2 209676582 209676661 -43579922 - MADE1 DNA Mariner 0 80 2 207 139 0 0 chr2 209676732 209676768 -43579815 + (TATG)n Simple_repeat Simple_repeat 1 36 0 2407 109 0 0 chr2 209677039 209677350 -43579233 + AluSx SINE Alu 1 311 -1 194 218 0 18 chr2 209677923 209677978 -43578605 + GA-rich Low_complexity Low_complexity 1 54 0 244 277 0 0 chr2 209678622 209678687 -43577896 - MIR SINE MIR -133 129 65 21 0 0 0 chr2 209679442 209679463 -43577120 + AT_rich Low_complexity Low_complexity 1 21 0 1701 182 10 0 chr2 209680525 209680816 -43575767 + AluJo SINE Alu 5 298 -14 2219 117 0 0 chr2 209681257 209681557 -43575026 - AluSx SINE Alu -2 310 11 355 228 54 11 chr2 209682895 209682987 -43573596 - L3 LINE CR1 -872 705 610 201 306 83 16 chr2 209683056 209683177 -43573406 - L3 LINE CR1 -1083 494 366 367 35 17 17 chr2 209683312 209683370 -43573213 + (TTTA)n Simple_repeat Simple_repeat 3 60 0 6489 21 17 375 chr2 209683370 209685470 -43571113 - SVA Other Other -23 1363 16 192 402 8 25 chr2 209685498 209685620 -43570963 - L3 LINE CR1 -1382 195 76 2020 131 3 10 chr2 209686668 209686965 -43569618 + AluSx SINE Alu 1 295 -17 2685 91 34 13 chr2 209687134 209687520 -43569063 + L1PA13 LINE L1 5767 6160 -3 706 102 17 8 chr2 209687605 209687723 -43568860 + (TTCC)n Simple_repeat Simple_repeat 2 120 0 534 293 31 3 chr2 209687864 209688059 -43568524 - MIR SINE MIR 0 262 15 2330 206 50 2 chr2 209688613 209689073 -43567510 - LTR40a LTR ERVL 0 519 38 1993 204 130 87 chr2 209689972 209690731 -43565852 - MER21B LTR ERV1 -51 812 21 1992 166 51 0 chr2 209690948 209691279 -43565304 + MER7A DNA MER2_type 1 346 0 1694 174 110 0 chr2 209691527 209691621 -43564962 - MER2 DNA MER2_type 0 344 262 1753 166 35 0 chr2 209691621 209691904 -43564679 + AluJb SINE Alu 1 293 -19 1694 174 110 0 chr2 209691904 209692119 -43564464 - MER2 DNA MER2_type -82 262 1 204 158 0 0 chr2 209692427 209692465 -43564118 + (CACCAT)n Simple_repeat Simple_repeat 3 40 0 220 275 94 80 chr2 209693114 209693252 -43563331 + MIR SINE MIR 120 259 -3 976 239 71 57 chr2 209693336 209693860 -43562723 + L1ME4a LINE L1 5591 6121 0 886 283 77 26 chr2 209694100 209694489 -43562094 - MER115 DNA AcHobo -258 435 27 228 291 181 0 chr2 209694757 209694884 -43561699 - L3 LINE CR1 -189 1388 1239 221 258 43 135 chr2 209695348 209695511 -43561072 - MER5B DNA MER1_type -29 149 2 442 240 78 23 chr2 209696788 209696917 -43559666 - L2 LINE L2 -4 3268 3133 337 338 75 26 chr2 209697263 209697491 -43559092 - L2 LINE L2 -474 2840 2602 592 264 202 58 chr2 209697492 209697931 -43558652 - L2 LINE L2 -829 2485 2111 2162 85 3 30 chr2 209697931 209698226 -43558357 + AluSx SINE Alu 3 289 -23 592 264 202 58 chr2 209698226 209698460 -43558123 - L2 LINE L2 -1203 2111 1715 1833 160 7 7 chr2 209698522 209698815 -43557768 + AluJb SINE Alu 1 293 -19 206 105 26 0 chr2 209698815 209698853 -43557730 + (TTAAA)n Simple_repeat Simple_repeat 1 39 0 223 298 40 106 chr2 209698990 209699141 -43557442 + L2 LINE L2 3080 3220 -52 2220 186 47 33 chr2 209699141 209699657 -43556926 - Charlie1b DNA MER1_type 0 523 1 308 250 32 40 chr2 209700121 209700245 -43556338 + MIR SINE MIR 18 140 -68 236 30 30 0 chr2 209700465 209700498 -43556085 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 451 322 21 0 chr2 209700876 209701035 -43555548 - MIR3 SINE MIR -23 185 20 216 67 0 0 chr2 209703366 209703396 -43553187 + (CA)n Simple_repeat Simple_repeat 2 31 0 24 53 0 0 chr2 209704091 209704129 -43552454 + AT_rich Low_complexity Low_complexity 1 38 0 446 237 140 32 chr2 209704319 209704505 -43552078 + L2 LINE L2 3104 3309 -4 450 300 63 38 chr2 209704729 209704966 -43551617 - L2 LINE L2 -43 3270 3028 246 261 43 0 chr2 209705164 209705256 -43551327 + L1ME4a LINE L1 6022 6117 -4 3680 187 57 27 chr2 209707521 209708298 -43548285 - MER21B LTR ERV1 -21 842 43 334 261 0 0 chr2 209708303 209708372 -43548211 - MER21B LTR ERV1 -776 87 19 779 301 116 15 chr2 209708686 209709022 -43547561 + MARNA DNA Mariner 192 561 -25 383 313 4 0 chr2 209709883 209709998 -43546585 - MIR SINE MIR -62 146 31 2298 87 0 7 chr2 209710032 209710330 -43546253 - AluSc SINE Alu -13 296 1 1003 239 75 86 chr2 209711107 209711677 -43544906 + L1MC4 LINE L1 7479 8042 0 2183 94 0 29 chr2 209711680 209711988 -43544595 + AluSx SINE Alu 1 299 -13 604 305 106 63 chr2 209712663 209713342 -43543241 + L1MC/D LINE L1 4316 5023 -1123 385 229 39 104 chr2 209713514 209713668 -43542915 + L1MC/D LINE L1 5350 5493 -629 1236 261 119 48 chr2 209714865 209714975 -43541608 - L1ME4a LINE L1 -5 6116 6015 1691 184 50 71 chr2 209714975 209715453 -43541130 - LTR37B LTR ERV1 0 468 1 1236 261 119 48 chr2 209715453 209715541 -43541042 - L1ME4a LINE L1 -106 6015 5935 6394 31 0 0 chr2 209715541 209716246 -43540337 - L1PA4 LINE L1 -3 6152 5448 1236 261 119 48 chr2 209716246 209716752 -43539831 - L1ME4a LINE L1 -186 5935 5361 258 350 15 51 chr2 209717398 209717535 -43539048 - MIR3 SINE MIR -48 160 29 1512 156 53 39 chr2 209718213 209718495 -43538088 + AluJb SINE Alu 1 286 -26 16757 152 12 14 chr2 209719209 209723181 -43533402 + L1PA14 LINE L1 2197 6161 0 399 268 49 0 chr2 209723378 209723501 -43533082 - MIR SINE MIR -86 176 48 197 279 0 0 chr2 209725419 209725462 -43531121 + L2 LINE L2 3008 3050 -222 200 167 0 24 chr2 209725667 209725709 -43530874 + L2 LINE L2 3268 3308 -5 197 279 221 0 chr2 209725865 209725933 -43530650 + L3 LINE CR1 1144 1226 -351 201 74 0 0 chr2 209726502 209726529 -43530054 + (CA)n Simple_repeat Simple_repeat 2 28 0 476 138 0 11 chr2 209726529 209726623 -43529960 + (GA)n Simple_repeat Simple_repeat 1 93 0 293 161 151 43 chr2 209726717 209726810 -43529773 + MER112 DNA MER1_type 153 255 -5 285 232 42 21 chr2 209726832 209726927 -43529656 + MER5A DNA MER1_type 17 113 -76 401 110 14 0 chr2 209727155 209727228 -43529355 + (TCCA)n Simple_repeat Simple_repeat 1 74 0 781 253 138 14 chr2 209728241 209728530 -43528053 - MER46C DNA MER2_type -12 326 2 3335 151 73 7 chr2 209730129 209730553 -43526030 - MER7C DNA MER2_type -2428 600 128 1745 181 0 19 chr2 209730553 209730867 -43525716 + AluJb SINE Alu 1 293 -19 3335 151 73 7 chr2 209730867 209731005 -43525578 - MER7C DNA MER2_type -2900 128 1 369 250 112 26 chr2 209731037 209731153 -43525430 + MER94 DNA DNA 6 131 -3 191 346 108 23 chr2 209731162 209731292 -43525291 - MIR SINE MIR -114 148 8 235 214 221 46 chr2 209731886 209732017 -43524566 + MER5A DNA MER1_type 21 174 -15 * 433 208 99 0 chr2 209731935 209732036 -43524547 - MER5A DNA MER1_type -77 112 2 26 64 0 0 chr2 209733272 209733319 -43523264 + AT_rich Low_complexity Low_complexity 1 47 0 228 35 0 0 chr2 209734774 209734803 -43521780 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1917 113 3 11 chr2 209734807 209735091 -43521492 - AluSx SINE Alu -30 282 1 227 297 143 0 chr2 209735296 209735387 -43521196 - L3b LINE CR1 -268 1315 1212 1133 235 107 14 chr2 209735402 209736072 -43520511 - L1MD3 LINE L1 -1 7994 7239 2395 78 0 0 chr2 209736074 209736382 -43520201 - AluSc SINE Alu -1 308 1 216 0 0 0 chr2 209737287 209737311 -43519272 + (A)n Simple_repeat Simple_repeat 1 24 0 183 283 17 33 chr2 209738407 209738467 -43518116 + MIR3 SINE MIR 100 158 -50 339 245 123 31 chr2 209738469 209738533 -43518050 - MER5B DNA MER1_type 0 178 121 2046 110 10 23 chr2 209738533 209738672 -43517911 + AluSq SINE Alu 1 140 -173 2242 72 3 3 chr2 209738672 209738962 -43517621 + AluSp SINE Alu 7 296 -17 2046 110 10 23 chr2 209738962 209739130 -43517453 + AluSq SINE Alu 140 304 -9 339 245 123 31 chr2 209739130 209739228 -43517355 - MER5B DNA MER1_type -57 121 1 487 286 135 52 chr2 209739534 209739648 -43516935 + L3 LINE CR1 727 830 -747 2150 123 3 0 chr2 209739648 209739957 -43516626 + AluSx SINE Alu 1 310 -2 487 286 135 52 chr2 209739957 209740191 -43516392 + L3 LINE CR1 830 1104 -473 180 256 223 54 chr2 209740402 209740644 -43515939 + L3 LINE CR1 1133 1415 -162 643 229 29 0 chr2 209741012 209741152 -43515431 + MIR SINE MIR 36 179 -83 378 0 0 0 chr2 209743626 209743668 -43512915 + (CA)n Simple_repeat Simple_repeat 2 43 0 1553 172 0 56 chr2 209745367 209745669 -43510914 + AluJo SINE Alu 13 297 -15 1719 162 3 7 chr2 209745810 209746112 -43510471 - AluSx SINE Alu -11 301 1 1789 191 98 36 chr2 209746578 209747018 -43509565 - MLT1C LTR MaLR 0 467 1 620 228 141 32 chr2 209747277 209747527 -43509056 - L1ME1 LINE L1 -1 6183 5905 1595 168 28 0 chr2 209747558 209747843 -43508740 + AluJb SINE Alu 3 295 -17 315 71 0 0 chr2 209747947 209747989 -43508594 + (TC)n Simple_repeat Simple_repeat 1 42 0 315 71 0 0 chr2 209749117 209749159 -43507424 + (CA)n Simple_repeat Simple_repeat 1 42 0 2131 124 0 0 chr2 209750090 209750388 -43506195 + AluSx SINE Alu 1 298 -14 1630 154 3 23 chr2 209750786 209751085 -43505498 - AluJo SINE Alu -17 295 3 33 35 0 17 chr2 209751680 209751717 -43504866 + AT_rich Low_complexity Low_complexity 1 38 -19 2116 111 0 0 chr2 209751717 209752005 -43504578 + AluSx SINE Alu 1 288 -24 33 35 0 17 chr2 209752005 209752025 -43504558 + AT_rich Low_complexity Low_complexity 38 57 0 1292 242 49 56 chr2 209752469 209752895 -43503688 - MLT1J LTR MaLR -64 447 25 1367 224 8 0 chr2 209753601 209753856 -43502727 + MIR SINE MIR 2 258 -4 2030 129 3 0 chr2 209753880 209754175 -43502408 + AluSx SINE Alu 1 296 -16 544 265 122 20 chr2 209754349 209754545 -43502038 + MIR SINE MIR 41 256 -6 366 118 176 0 chr2 209754824 209754892 -43501691 + MADE1 DNA Mariner 1 80 0 339 25 0 0 chr2 209755688 209755728 -43500855 + (TG)n Simple_repeat Simple_repeat 1 40 0 2177 95 3 0 chr2 209755914 209756209 -43500374 + AluSx SINE Alu 1 296 -16 239 227 109 67 chr2 209757397 209757516 -43499067 + MIR SINE MIR 67 190 -72 555 204 211 0 chr2 209758164 209758306 -43498277 + MER5B DNA MER1_type 7 178 0 189 275 56 92 chr2 209758350 209758424 -43498159 + MER5A DNA MER1_type 2 70 -119 1733 138 3 46 chr2 209758424 209758729 -43497854 + AluJb SINE Alu 1 292 -20 189 275 56 92 chr2 209758729 209758796 -43497787 + MER5A DNA MER1_type 70 138 -51 386 324 92 6 chr2 209758855 209759028 -43497555 + MER5A DNA MER1_type 2 189 0 265 269 29 6 chr2 209759417 209759588 -43496995 + (TGGA)n Simple_repeat Simple_repeat 2 176 0 1770 148 0 3 chr2 209759738 209760022 -43496561 + AluJo SINE Alu 1 283 -29 411 21 0 0 chr2 209760025 209760073 -43496510 + (TAAA)n Simple_repeat Simple_repeat 4 51 0 338 256 37 115 chr2 209761095 209761152 -43495431 + L1MCa LINE L1 1890 1950 -4476 1997 127 0 3 chr2 209761152 209761444 -43495139 + AluSx SINE Alu 1 291 -21 338 256 37 115 chr2 209761444 209761577 -43495006 + L1MCa LINE L1 1950 2065 -4361 812 308 53 15 chr2 209763438 209763776 -43492807 - L1MC4a LINE L1 -1882 5926 5576 330 269 113 57 chr2 209764156 209764297 -43492286 - L2 LINE L2 -191 3081 2933 268 294 163 0 chr2 209764287 209764379 -43492204 + MIR SINE MIR 92 198 -64 * 909 150 0 0 chr2 209764588 209764721 -43491862 - FLAM_C SINE Alu 0 133 1 480 294 51 46 chr2 209765707 209765904 -43490679 + MIR SINE MIR 33 230 -32 2394 218 109 24 chr2 209766170 209766866 -43489717 - MER21B LTR ERV1 -108 755 1 2068 104 0 23 chr2 209767355 209767654 -43488929 - AluSq SINE Alu -13 300 9 918 206 97 114 chr2 209767770 209768130 -43488453 - MLT1C LTR MaLR -16 451 21 195 374 101 0 chr2 209768671 209768770 -43487813 + L2 LINE L2 3136 3244 -28 513 333 109 22 chr2 209769854 209770220 -43486363 + MLT1K LTR MaLR 127 524 -64 221 204 20 0 chr2 209770389 209770438 -43486145 + T-rich Low_complexity Low_complexity 4 53 0 875 142 0 0 chr2 209770503 209770623 -43485960 + FLAM_A SINE Alu 1 120 -13 26 30 0 0 chr2 209770623 209770656 -43485927 + AT_rich Low_complexity Low_complexity 1 33 0 339 150 0 0 chr2 209770832 209770892 -43485691 + (TC)n Simple_repeat Simple_repeat 2 61 0 888 232 173 56 chr2 209771515 209771873 -43484710 - MLT1J1 LTR MaLR -41 405 6 2003 97 38 3 chr2 209772735 209773023 -43483560 + AluSc SINE Alu 1 298 -11 1731 181 3 0 chr2 209773062 209773365 -43483218 + AluJb SINE Alu 1 304 -8 231 36 0 0 chr2 209774054 209774082 -43482501 + (CA)n Simple_repeat Simple_repeat 1 28 0 351 279 39 0 chr2 209774627 209774641 -43481942 + MIR3 SINE MIR 95 107 -101 3559 113 25 77 chr2 209774641 209775276 -43481307 - LTR43 LTR ERV1 0 602 1 351 279 39 0 chr2 209775276 209775365 -43481218 + MIR3 SINE MIR 107 202 -6 189 0 0 0 chr2 209775737 209775758 -43480825 + (CA)n Simple_repeat Simple_repeat 2 22 0 1024 164 0 30 chr2 209776238 209776403 -43480180 + U1 snRNA snRNA 2 161 -4 221 268 85 12 chr2 209777978 209778060 -43478523 + MIR SINE MIR 114 201 -61 296 266 70 23 chr2 209779073 209779201 -43477382 + MIR3 SINE MIR 1 134 -74 278 155 0 86 chr2 209779267 209779325 -43477258 + MER20 DNA MER1_type 146 198 -21 580 191 11 0 chr2 209779517 209779611 -43476972 + FLAM_A SINE Alu 2 96 -46 357 314 94 58 chr2 209780023 209780207 -43476376 - MIR SINE MIR -20 242 48 481 272 115 84 chr2 209780207 209780530 -43476053 + MER102b DNA MER1_type 5 337 -4 357 314 94 58 chr2 209780530 209780578 -43476005 - MIR SINE MIR -214 48 3 198 103 0 0 chr2 209780696 209780725 -43475858 + (CATA)n Simple_repeat Simple_repeat 1 29 0 2179 116 0 6 chr2 209780793 209781104 -43475479 - AluSc SINE Alu 0 309 1 448 300 42 0 chr2 209781152 209781272 -43475311 - L2 LINE L2 -6 3266 3142 2272 89 7 3 chr2 209781708 209782012 -43474571 + AluSc SINE Alu 1 305 -4 627 252 129 10 chr2 209782463 209782661 -43473922 - MIR SINE MIR -28 234 20 383 208 83 33 chr2 209783726 209783846 -43472737 - L1ME4a LINE L1 -12 6109 5984 2129 131 0 0 chr2 209784244 209784541 -43472042 - AluSg SINE Alu -13 297 1 239 351 47 31 chr2 209784822 209785013 -43471570 + L2 LINE L2 2384 2577 -737 512 233 16 47 chr2 209785017 209785146 -43471437 - L2 LINE L2 0 3313 3189 262 264 120 60 chr2 209785146 209785536 -43471047 + L2 LINE L2 2577 3008 -264 202 318 0 0 chr2 209785602 209785646 -43470937 - L2 LINE L2 -93 3179 3136 936 279 85 22 chr2 209785794 209786159 -43470424 - L2 LINE L2 -1 3312 2925 2030 115 29 0 chr2 209786568 209786846 -43469737 - AluSg SINE Alu -19 291 6 22 0 0 0 chr2 209787889 209787911 -43468672 + AT_rich Low_complexity Low_complexity 1 22 0 228 263 0 0 chr2 209789027 209789103 -43467480 + (CA)n Simple_repeat Simple_repeat 2 77 0 611 225 74 85 chr2 209789532 209789593 -43466990 + MIR SINE MIR 7 67 -195 2041 138 0 0 chr2 209789593 209789884 -43466699 - AluSx SINE Alu -21 291 1 611 225 74 85 chr2 209789884 209790080 -43466503 + MIR SINE MIR 67 261 -1 340 160 0 0 chr2 209790095 209790145 -43466438 - MER77 LTR ERV1 0 605 556 740 159 0 0 chr2 209790147 209790254 -43466329 + AluJo SINE Alu 2 108 -204 228 263 0 0 chr2 209790415 209790491 -43466092 + (CA)n Simple_repeat Simple_repeat 2 77 0 1301 131 5 5 chr2 209790711 209790902 -43465681 + AluJo SINE Alu 112 302 -10 2121 122 7 0 chr2 209791702 209791997 -43464586 + AluSx SINE Alu 1 297 -15 25 0 0 0 chr2 209792540 209792565 -43464018 + AT_rich Low_complexity Low_complexity 1 25 0 25 51 0 0 chr2 209792930 209792969 -43463614 + AT_rich Low_complexity Low_complexity 1 39 0 1675 150 50 25 chr2 209793195 209793475 -43463108 + AluJb SINE Alu 1 287 -25 187 227 91 0 chr2 209793613 209793657 -43462926 + MIR SINE MIR 199 246 -16 1813 141 24 37 chr2 209793763 209794061 -43462522 - AluSx SINE Alu -18 294 1 800 161 0 0 chr2 209794097 209794209 -43462374 + FLAM_C SINE Alu 7 118 -25 27 49 0 0 chr2 209794209 209794250 -43462333 + AT_rich Low_complexity Low_complexity 1 41 0 206 325 104 0 chr2 209794582 209794659 -43461924 - MIR3 SINE MIR -32 176 92 1872 177 0 90 chr2 209796539 209796624 -43459959 + MLT1A1 LTR MaLR 1 92 -273 2818 7 0 0 chr2 209796624 209796927 -43459656 + AluYa5 SINE Alu 1 303 -8 1872 177 0 90 chr2 209796927 209797242 -43459341 + MLT1A1 LTR MaLR 92 365 0 1547 174 152 48 chr2 209798447 209798714 -43457869 - MLT1C LTR MaLR -4 463 136 2289 99 3 3 chr2 209798714 209799017 -43457566 + AluSg SINE Alu 1 303 -7 1547 174 152 48 chr2 209799017 209799164 -43457419 - MLT1C LTR MaLR -331 136 6 1445 181 0 0 chr2 209799647 209799890 -43456693 - AluJo SINE Alu -16 296 54 412 298 39 34 chr2 209799919 209800127 -43456456 + MER3 DNA MER1_type 1 209 0 * 844 163 46 41 chr2 209799966 209800162 -43456421 - MER3 DNA MER1_type 0 209 13 540 180 117 150 chr2 209800174 209800234 -43456349 + LTR37B LTR ERV1 114 174 -294 2069 188 96 65 chr2 209800234 209800430 -43456153 + MLT1D LTR MaLR 1 190 -315 2429 75 0 0 chr2 209800430 209800724 -43455859 + AluY SINE Alu 1 294 -17 2069 188 96 65 chr2 209800724 209801017 -43455566 + MLT1D LTR MaLR 190 505 0 540 180 117 150 chr2 209801017 209801289 -43455294 + LTR37B LTR ERV1 174 435 -33 1102 134 0 0 chr2 209801302 209801451 -43455132 - L1PB3 LINE L1 -15 6139 5991 5889 98 16 8 chr2 209801668 209802102 -43454481 + L1PA14 LINE L1 5302 5748 -413 2257 127 140 11 chr2 209802102 209802481 -43454102 + MSTA LTR MaLR 1 428 0 5889 98 16 8 chr2 209802481 209802896 -43453687 + L1PA14 LINE L1 5748 6158 -3 3651 145 28 52 chr2 209802908 209803078 -43453505 + L1MB3 LINE L1 5477 5650 -533 2234 130 0 16 chr2 209803078 209803393 -43453190 - AluSg SINE Alu 0 310 1 3651 145 28 52 chr2 209803393 209803946 -43452637 + L1MB3 LINE L1 5650 6182 -1 297 0 0 0 chr2 209804275 209804308 -43452275 + (CA)n Simple_repeat Simple_repeat 2 34 0 1807 167 3 3 chr2 209804511 209804799 -43451784 - AluJo SINE Alu -24 288 1 202 139 23 23 chr2 209805665 209805708 -43450875 + (CA)n Simple_repeat Simple_repeat 2 44 0 2410 139 55 38 chr2 209806186 209806559 -43450024 + MSTB LTR MaLR 1 383 -43 2143 132 0 0 chr2 209806559 209806863 -43449720 - AluY SINE Alu -2 309 6 2410 139 55 38 chr2 209806863 209806907 -43449676 + MSTB LTR MaLR 383 425 -1 2490 70 0 0 chr2 209807572 209807873 -43448710 + AluSx SINE Alu 1 301 -11 2617 34 10 0 chr2 209808024 209808321 -43448262 - AluY SINE Alu -11 300 1 828 164 0 22 chr2 209808725 209808859 -43447724 + FLAM_C SINE Alu 3 133 0 28 29 0 0 chr2 209808966 209809001 -43447582 + AT_rich Low_complexity Low_complexity 1 35 0 207 139 0 0 chr2 209809158 209809194 -43447389 + (CATA)n Simple_repeat Simple_repeat 1 36 0 825 204 11 28 chr2 209809598 209809774 -43446809 + AluJo SINE Alu 1 173 -139 441 172 0 0 chr2 209810065 209810129 -43446454 + AluJ/FLAM SINE Alu 21 84 -228 183 67 0 0 chr2 209810550 209810580 -43446003 + L2 LINE L2 3284 3313 0 918 212 69 14 chr2 209810614 209810831 -43445752 + MIR SINE MIR 34 262 0 252 227 67 42 chr2 209811003 209811122 -43445461 + L2 LINE L2 2842 2963 -309 291 254 47 72 chr2 209811743 209811936 -43444647 - MER5A DNA MER1_type -1 188 1 369 284 103 62 chr2 209812666 209812986 -43443597 - L1M2 LINE L1 -5774 1075 743 205 238 0 0 chr2 209813007 209813049 -43443534 + (CCG)n Simple_repeat Simple_repeat 1 42 0 26 0 0 0 chr2 209814180 209814206 -43442377 + AT_rich Low_complexity Low_complexity 1 26 0 498 215 65 0 chr2 209814998 209815105 -43441478 + MER81 DNA DNA 1 114 0 696 289 35 18 chr2 209815193 209815421 -43441162 - MIR SINE MIR -30 232 1 336 258 188 0 chr2 209815428 209815556 -43441027 + MIR SINE MIR 100 251 -11 1972 119 14 3 chr2 209817155 209817440 -43439143 - AluSx SINE Alu -24 288 1 644 286 117 10 chr2 209817468 209817674 -43438909 - MIR SINE MIR -18 244 17 287 286 119 24 chr2 209818337 209818463 -43438120 - MIR SINE MIR -66 196 59 1638 145 28 17 chr2 209819762 209820052 -43436531 + AluJo SINE Alu 1 293 -19 1870 121 96 0 chr2 209820208 209820488 -43436095 - AluSx SINE Alu -5 307 1 1807 154 3 17 chr2 209821050 209821348 -43435235 + AluJo SINE Alu 1 294 -18 740 164 29 79 chr2 209822207 209822347 -43434236 - FLAM_C SINE Alu 0 133 1 1733 168 7 0 chr2 209822441 209822727 -43433856 + AluSx SINE Alu 1 288 -24 270 0 0 0 chr2 209823382 209823412 -43433171 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 424 186 216 50 chr2 209825277 209825325 -43431258 - MER106B DNA MER1_type -4 1055 1016 2480 57 3 3 chr2 209825325 209825624 -43430959 - AluY SINE Alu -12 299 1 424 186 216 50 chr2 209825624 209825720 -43430863 - MER106B DNA MER1_type -43 1016 937 2063 121 24 0 chr2 209825720 209826010 -43430573 - AluSg SINE Alu -13 297 1 424 186 216 50 chr2 209826010 209826063 -43430520 - MER106B DNA MER1_type -122 937 1 315 0 0 0 chr2 209827025 209827060 -43429523 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 1359 70 48 5 chr2 209827065 209827251 -43429332 - AluY SINE Alu 0 311 118 190 280 290 0 chr2 209828244 209828351 -43428232 + L2 LINE L2 2562 2699 -615 602 185 161 8 chr2 209828575 209828705 -43427878 - FRAM SINE Alu -13 163 14 306 213 62 46 chr2 209829176 209829266 -43427317 + MIR SINE MIR 64 153 -63 1026 201 6 0 chr2 209829291 209829460 -43427123 + FAM SINE Alu 1 170 -5 1473 57 0 17 chr2 209829529 209829706 -43426877 - AluSp SINE Alu -139 174 1 390 293 139 54 chr2 209830094 209830353 -43426230 + HAL1 LINE L1 257 537 -1970 2362 56 7 30 chr2 209830355 209830659 -43425924 + AluY SINE Alu 1 297 -14 971 28 0 9 chr2 209830661 209830769 -43425814 + U6 snRNA snRNA 1 107 0 1645 53 19 14 chr2 209830769 209830976 -43425607 + L1PA5 LINE L1 5941 6148 -6 43 0 0 19 chr2 209830976 209831002 -43425581 + AT_rich Low_complexity Low_complexity 1 26 -27 2530 48 3 0 chr2 209831002 209831294 -43425289 + AluSp SINE Alu 1 293 -20 43 0 0 19 chr2 209831294 209831321 -43425262 + AT_rich Low_complexity Low_complexity 26 53 0 1280 161 173 12 chr2 209831321 209831570 -43425013 + AluJo SINE Alu 2 290 -12 2109 92 67 0 chr2 209831570 209831852 -43424731 + AluSx SINE Alu 1 301 -11 370 222 52 63 chr2 209831872 209831899 -43424684 + MLT1J LTR MaLR 201 227 -284 2214 116 0 0 chr2 209831899 209832193 -43424390 + AluSc SINE Alu 1 294 -15 370 222 52 63 chr2 209832193 209832352 -43424231 + MLT1J LTR MaLR 227 419 -92 238 167 0 0 chr2 209832409 209832457 -43424126 + HAL1 LINE L1 2327 2374 -133 1542 239 207 19 chr2 209832526 209832860 -43423723 + LTR50 LTR ERVL 9 279 -516 2377 82 0 0 chr2 209832860 209833153 -43423430 + AluSc SINE Alu 1 293 -16 1542 239 207 19 chr2 209833153 209833387 -43423196 + LTR50 LTR ERVL 279 684 -111 305 322 35 9 chr2 209833735 209833850 -43422733 + ERVL LTR ERVL 352 469 -5295 2576 207 32 58 chr2 209833880 209834039 -43422544 + L1M4c LINE L1 2091 2253 -5314 2246 117 13 0 chr2 209834039 209834338 -43422245 + AluSq SINE Alu 1 303 -10 2576 207 32 58 chr2 209834338 209834908 -43421675 + L1M4c LINE L1 2253 2798 -4769 2535 61 3 13 chr2 209834908 209835218 -43421365 + AluY SINE Alu 1 307 -4 2576 207 32 58 chr2 209835218 209835310 -43421273 + L1M4c LINE L1 2798 2891 -4676 1367 210 54 21 chr2 209835313 209835646 -43420937 - MLT1A1 LTR MaLR 0 365 22 1936 169 14 97 chr2 209835652 209835938 -43420645 - MLT-int LTR MaLR -944 791 483 1467 199 44 4 chr2 209835938 209836210 -43420373 + AluJo SINE Alu 13 295 -17 2325 82 3 3 chr2 209836212 209836505 -43420078 + AluY SINE Alu 1 293 -18 1936 169 14 97 chr2 209836505 209836658 -43419925 - MLT-int LTR MaLR -1253 482 386 405 135 0 5 chr2 209836660 209836871 -43419712 + AluJb SINE Alu 1 306 -6 2175 151 52 26 chr2 209836871 209837205 -43419378 - MLT1A1-int LTR MaLR -1339 396 49 2016 135 3 3 chr2 209837205 209837516 -43419067 - AluSq SINE Alu 0 313 1 2175 151 52 26 chr2 209837516 209837566 -43419017 - MLT1A1-int LTR MaLR -1686 49 2 1293 241 32 43 chr2 209837567 209837852 -43418731 - MLT1A1 LTR MaLR 0 365 83 2173 121 13 3 chr2 209837852 209838158 -43418425 - AluSg SINE Alu -1 309 1 1293 241 32 43 chr2 209838158 209838241 -43418342 - MLT1A1 LTR MaLR -282 83 1 460 231 154 43 chr2 209838333 209838683 -43417900 + L1M4c LINE L1 3141 3529 -4038 2373 133 54 41 chr2 209838698 209839090 -43417493 + L1M4c LINE L1 13 409 -7156 612 125 0 0 chr2 209839090 209839178 -43417405 + AluS SINE Alu 1 88 -224 1554 179 3 10 chr2 209839184 209839480 -43417103 - LTR5 LTR ERVK -590 379 86 524 91 0 0 chr2 209839480 209839557 -43417026 - Alu SINE Alu -10 302 226 2283 79 0 0 chr2 209839557 209839835 -43416748 + AluSg SINE Alu 30 307 -3 6030 163 8 1 chr2 209839835 209840764 -43415819 + L1M4c LINE L1 399 1333 -6232 560 126 32 0 chr2 209840767 209840862 -43415721 + LTR5 LTR ERVK 1 98 -871 2523 40 9 43 chr2 209840863 209841185 -43415398 + AluY SINE Alu 1 311 0 2248 109 0 16 chr2 209841284 209841421 -43415162 + AluSx SINE Alu 1 139 -173 2338 95 0 0 chr2 209841421 209841715 -43414868 + AluSc SINE Alu 1 294 -15 2248 109 0 16 chr2 209841715 209841890 -43414693 + AluSx SINE Alu 139 308 -4 383 157 19 4 chr2 209841937 209842011 -43414572 + L1M4c LINE L1 4181 4252 -3313 2149 129 14 0 chr2 209842011 209842306 -43414277 + AluSx SINE Alu 1 299 -13 1976 138 0 43 chr2 209842306 209842631 -43413952 + AluSx SINE Alu 1 311 -1 383 157 19 4 chr2 209842631 209842645 -43413938 + L1M4c LINE L1 4251 4272 -3293 2526 59 0 3 chr2 209842676 209842982 -43413601 + AluY SINE Alu 1 305 -6 1693 160 0 0 chr2 209842985 209843247 -43413336 + AluSx SINE Alu 6 267 -45 252 0 0 0 chr2 209843251 209843279 -43413304 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 2795 171 16 4 chr2 209843280 209843834 -43412749 + L1M4c LINE L1 4497 5057 -2508 7801 103 10 10 chr2 209843834 209844893 -43411690 - HSMAR1 DNA Mariner 0 1287 229 1445 156 35 23 chr2 209846263 209846520 -43410063 + AluJo SINE Alu 9 268 -44 397 220 55 9 chr2 209846890 209846999 -43409584 - L1 LINE L1 -2596 3550 3437 1823 145 69 0 chr2 209847004 209847293 -43409290 - AluSx SINE Alu -1 311 3 2117 133 7 3 chr2 209847295 209847596 -43408987 - AluSx SINE Alu -10 302 1 1868 130 76 0 chr2 209847675 209847952 -43408631 - AluSx SINE Alu -14 298 1 461 212 137 45 chr2 209847997 209848310 -43408273 - MLT1G LTR MaLR 0 590 152 403 138 0 0 chr2 209848356 209848414 -43408169 - MLT1G LTR MaLR -535 60 3 743 113 0 0 chr2 209848557 209848663 -43407920 - AluSp/q SINE Alu -12 301 196 729 183 12 6 chr2 209848666 209848835 -43407748 + GA-rich Low_complexity Low_complexity 3 172 0 348 228 77 39 chr2 209848925 209849054 -43407529 + L1ME1 LINE L1 6041 6176 -2 480 223 134 0 chr2 209849564 209849676 -43406907 - FLAM_A SINE Alu -6 127 1 499 157 186 0 chr2 209849695 209849797 -43406786 - 5S rRNA rRNA 0 121 1 267 289 33 11 chr2 209849883 209849973 -43406610 + L1ME LINE L1 3 94 -5976 794 194 58 48 chr2 209850108 209850314 -43406269 - MER21B LTR ERV1 -277 586 379 626 206 0 0 chr2 209850315 209850422 -43406161 - AluJb SINE Alu -203 109 3 932 195 53 0 chr2 209850449 209850618 -43405965 - AluJo SINE Alu -132 180 3 1687 156 0 71 chr2 209850628 209850800 -43405783 - AluJb SINE Alu -22 290 148 1859 84 0 13 chr2 209850800 209851039 -43405544 - AluSp SINE Alu -4 309 74 1687 156 0 71 chr2 209851039 209851174 -43405409 - AluJb SINE Alu -164 148 5 3032 87 64 98 chr2 209851556 209852120 -43404463 - L1PB1 LINE L1 0 6151 5607 190 243 68 14 chr2 209852120 209852194 -43404389 - L2 LINE L2 -590 2724 2647 1802 153 4 4 chr2 209852535 209852816 -43403767 + AluSx SINE Alu 1 281 -31 1629 163 46 11 chr2 209852843 209853125 -43403458 - AluSx SINE Alu -20 292 1 280 152 30 0 chr2 209853196 209853262 -43403321 + GA-rich Low_complexity Low_complexity 1 68 0 1466 190 26 39 chr2 209854211 209854516 -43402067 + AluSx SINE Alu 1 301 -11 22 0 0 0 chr2 209854879 209854901 -43401682 + AT_rich Low_complexity Low_complexity 1 22 0 2459 74 0 3 chr2 209854906 209855204 -43401379 + AluY SINE Alu 1 297 -14 879 136 0 0 chr2 209855846 209855964 -43400619 + FLAM_C SINE Alu 1 118 -25 1942 111 3 31 chr2 209855988 209856277 -43400306 + AluY SINE Alu 1 281 -30 2041 147 3 3 chr2 209856379 209856691 -43399892 + AluSx SINE Alu 1 312 0 2107 103 11 4 chr2 209856737 209857018 -43399565 - AluY SINE Alu -24 287 5 372 115 0 0 chr2 209857021 209857073 -43399510 - Alu SINE Alu -256 52 1 261 267 19 48 chr2 209857097 209857202 -43399381 - MIR SINE MIR -57 151 50 1778 121 0 12 chr2 209857735 209857984 -43398599 + AluSx SINE Alu 60 305 -7 258 161 272 0 chr2 209858268 209858349 -43398234 - L1MA8 LINE L1 -1 6290 6188 2118 145 0 7 chr2 209859065 209859375 -43397208 + AluSx SINE Alu 1 308 -4 267 31 0 0 chr2 209859453 209859485 -43397098 + (CAA)n Simple_repeat Simple_repeat 2 33 0 1881 97 35 59 chr2 209859559 209859848 -43396735 + AluSx SINE Alu 15 296 -16 238 220 0 0 chr2 209860647 209860697 -43395886 + A-rich Low_complexity Low_complexity 1 50 0 1141 171 88 118 chr2 209862866 209863323 -43393260 + LTR7 LTR ERV1 1 443 -7 559 133 11 11 chr2 209863810 209863900 -43392683 - HY4 scRNA scRNA -3 90 1 1912 135 7 7 chr2 209863929 209864225 -43392358 + AluJo SINE Alu 1 296 -16 2115 101 31 0 chr2 209864228 209864515 -43392068 + AluSx SINE Alu 1 296 -16 906 98 15 0 chr2 209865650 209865783 -43390800 + FLAM_C SINE Alu 6 140 -3 2412 103 61 63 chr2 209865967 209866227 -43390356 - LTR46 LTR ERV1 0 460 200 1757 91 133 0 chr2 209866227 209866490 -43390093 - AluSx SINE Alu 0 302 5 2412 103 61 63 chr2 209866490 209866658 -43389925 - LTR46 LTR ERV1 -260 200 33 257 0 0 0 chr2 209866713 209866741 -43389842 - LTR46 LTR ERV1 -432 28 1 2359 87 3 3 chr2 209866813 209867112 -43389471 + AluSg SINE Alu 1 299 -11 2197 114 17 0 chr2 209867214 209867512 -43389071 + AluSg SINE Alu 2 304 -6 768 99 0 0 chr2 209867512 209867613 -43388970 + AluSg/x SINE Alu 196 296 -16 1418 134 22 13 chr2 209867633 209867865 -43388718 + MER50 LTR ERV1 1 234 -500 * 1792 112 29 29 chr2 209867863 209868141 -43388442 + MER50 LTR ERV1 433 710 -24 2194 101 3 3 chr2 209868289 209868576 -43388007 - AluSp SINE Alu -26 287 1 361 237 271 11 chr2 209868731 209868908 -43387675 - MIR SINE MIR -25 237 15 344 243 118 35 chr2 209868992 209869030 -43387553 + LTR38 LTR ERV1 1 34 -522 2400 74 13 3 chr2 209869030 209869328 -43387255 - AluSc SINE Alu -8 301 1 344 243 118 35 chr2 209869328 209869433 -43387150 + LTR38 LTR ERV1 34 156 -400 1325 172 46 67 chr2 209869458 209869743 -43386840 - AluJb SINE Alu -33 279 1 1404 217 71 16 chr2 209869746 209870124 -43386459 + LTR38B LTR ERV1 212 610 0 1280 170 34 0 chr2 209870124 209870359 -43386224 + L1PA16 LINE L1 5923 6165 -1 2280 102 0 13 chr2 209870387 209870690 -43385893 + AluSq SINE Alu 1 299 -14 2352 103 0 0 chr2 209870745 209871046 -43385537 - AluY SINE Alu -10 301 1 1935 88 39 42 chr2 209871084 209871367 -43385216 + AluSc SINE Alu 17 298 -11 1026 104 0 0 chr2 209871503 209871647 -43384936 - Tigger4(Zombi) DNA MER2_type -59 2672 2529 27 49 0 0 chr2 209871655 209871696 -43384887 + AT_rich Low_complexity Low_complexity 1 41 0 27 29 0 0 chr2 209872580 209872614 -43383969 + AT_rich Low_complexity Low_complexity 1 34 0 2144 225 63 37 chr2 209872664 209873264 -43383319 - MER21B LTR ERV1 -150 713 98 348 279 0 0 chr2 209873316 209873395 -43383188 - MER21B LTR ERV1 -773 90 12 2188 97 21 0 chr2 209873528 209873818 -43382765 - AluSq SINE Alu -16 297 2 1957 159 13 3 chr2 209873840 209874142 -43382441 - AluSx SINE Alu -7 305 1 605 136 0 11 chr2 209874328 209874416 -43382167 - AluSc SINE Alu -220 89 3 782 123 139 0 chr2 209874419 209874541 -43382042 - Tigger4(Zombi) DNA MER2_type -2590 141 3 2601 56 0 0 chr2 209874576 209874878 -43381705 + AluY SINE Alu 1 302 -9 864 179 7 7 chr2 209875452 209875597 -43380986 - AluJb SINE Alu -83 229 85 257 246 0 16 chr2 209875852 209875913 -43380670 + MLT1J2 LTR MaLR 61 120 -330 2346 93 0 0 chr2 209875927 209876218 -43380365 - AluSc SINE Alu -18 291 1 1715 167 14 7 chr2 209876218 209876511 -43380072 - AluJo SINE Alu -1 311 16 954 174 20 113 chr2 209876740 209876987 -43379596 + AluJo SINE Alu 83 306 -6 356 225 90 27 chr2 209877025 209877136 -43379447 - MIR SINE MIR -109 153 36 2227 127 0 16 chr2 209877159 209877475 -43379108 - AluSx SINE Alu -1 311 1 761 152 7 43 chr2 209877774 209877912 -43378671 - FLAM_C SINE Alu 0 133 1 210 135 0 27 chr2 209878246 209878283 -43378300 + MIR3 SINE MIR 123 158 -50 667 247 41 111 chr2 209878963 209879026 -43377557 - L1ME3A LINE L1 -151 6019 5953 1859 172 0 25 chr2 209879026 209879346 -43377237 - AluJo SINE Alu 0 312 1 667 247 41 111 chr2 209879346 209879723 -43376860 - L1ME3A LINE L1 -217 5953 5610 2395 71 0 3 chr2 209879775 209880071 -43376512 - AluY SINE Alu -16 295 1 246 265 82 68 chr2 209880076 209880205 -43376378 - MER5B DNA MER1_type -1 177 44 1688 167 20 3 chr2 209880205 209880498 -43376085 + AluJb SINE Alu 1 298 -14 246 265 82 68 chr2 209880498 209880515 -43376068 - MER5B DNA MER1_type -134 44 29 1309 166 0 25 chr2 209880700 209880935 -43375648 + AluJo SINE Alu 84 312 0 1467 147 87 8 chr2 209881062 209881314 -43375269 - AluJo SINE Alu -16 296 25 757 124 0 0 chr2 209882369 209882474 -43374109 - U6 snRNA snRNA -2 105 1 2612 85 13 0 chr2 209882524 209882884 -43373699 + L1PA8 LINE L1 5788 6175 0 208 0 0 0 chr2 209882884 209882907 -43373676 + (CAAAA)n Simple_repeat Simple_repeat 3 170 0 287 349 39 54 chr2 209883212 209883281 -43373302 + L2 LINE L2 2719 2788 -526 2222 74 44 7 chr2 209883281 209883579 -43373004 + AluY SINE Alu 2 310 -1 287 349 39 54 chr2 209883579 209883767 -43372816 + L2 LINE L2 2788 2972 -342 977 135 0 0 chr2 209883773 209883906 -43372677 - FLAM_C SINE Alu 0 133 1 845 130 46 38 chr2 209884130 209884261 -43372322 + FLAM_C SINE Alu 1 132 -1 21 57 0 0 chr2 209884267 209884302 -43372281 + AT_rich Low_complexity Low_complexity 1 35 0 375 252 69 38 chr2 209884312 209884417 -43372166 + L2 LINE L2 3179 3290 -23 1584 188 45 7 chr2 209884417 209884704 -43371879 - AluJo SINE Alu -14 298 1 375 252 69 38 chr2 209884704 209884729 -43371854 + L2 LINE L2 3290 3313 0 1935 109 36 0 chr2 209884782 209885079 -43371504 + AluSq SINE Alu 1 307 0 1913 165 0 7 chr2 209885108 209885405 -43371178 + AluJb SINE Alu 1 295 -17 2318 108 0 7 chr2 209885435 209885741 -43370842 + AluSx SINE Alu 2 305 -7 2374 109 0 0 chr2 209885741 209886053 -43370530 + AluSx SINE Alu 1 312 0 2275 119 0 0 chr2 209887068 209887378 -43369205 - AluSx SINE Alu -2 310 1 812 149 7 47 chr2 209887468 209887616 -43368967 - AluJo SINE Alu -169 143 2 2141 101 24 3 chr2 209887755 209888053 -43368530 + AluSq SINE Alu 1 304 -9 2409 74 7 0 chr2 209888428 209888727 -43367856 + AluSx SINE Alu 2 302 -10 457 322 122 20 chr2 209888791 209889095 -43367488 + L2 LINE L2 2844 3178 -135 2016 75 4 29 chr2 209889169 209889450 -43367133 - AluSx SINE Alu -10 302 29 362 250 60 0 chr2 209889804 209889904 -43366679 + MER94 DNA DNA 7 112 -22 372 246 283 0 chr2 209890369 209890556 -43366027 - MIR SINE MIR -21 241 2 2024 131 3 3 chr2 209890728 209891033 -43365550 + AluJb SINE Alu 1 305 -7 2215 84 7 0 chr2 209891604 209891888 -43364695 - AluSc SINE Alu -4 305 20 498 263 100 13 chr2 209892300 209892483 -43364100 - MIR SINE MIR -27 235 39 27 0 0 0 chr2 209893141 209893168 -43363415 + AT_rich Low_complexity Low_complexity 1 27 0 227 196 65 0 chr2 209893285 209893331 -43363252 + L2 LINE L2 3216 3264 -8 24 53 0 0 chr2 209894427 209894465 -43362118 + AT_rich Low_complexity Low_complexity 1 38 0 2478 70 3 0 chr2 209894545 209894844 -43361739 + AluSx SINE Alu 1 300 -12 197 284 52 75 chr2 209894913 209895047 -43361536 - MER5A DNA MER1_type -6 183 53 2189 108 0 23 chr2 209895055 209895360 -43361223 - AluSx SINE Alu -14 298 1 43 20 0 0 chr2 209895363 209895413 -43361170 + AT_rich Low_complexity Low_complexity 1 50 0 800 165 0 0 chr2 209895413 209895528 -43361055 - FLAM_C SINE Alu -18 115 1 1080 156 17 0 chr2 209895572 209895752 -43360831 + MER5A DNA MER1_type 1 183 -6 418 125 0 0 chr2 209896143 209896207 -43360376 - L1MA10 LINE L1 -13 6321 6258 183 365 30 59 chr2 209896403 209896606 -43359977 + L2 LINE L2 2155 2351 -963 1745 142 20 20 chr2 209897234 209897536 -43359047 - AluJo SINE Alu -10 302 1 357 258 124 59 chr2 209898110 209898296 -43358287 - MLT1I LTR MaLR -179 230 33 447 307 149 4 chr2 209898535 209898763 -43357820 + MIR SINE MIR 2 262 0 237 200 77 0 chr2 209898768 209898833 -43357750 - MIR SINE MIR -96 166 97 2245 106 61 25 chr2 209898833 209899193 -43357390 - THE1C LTR MaLR -2 373 1 220 278 56 0 chr2 209899491 209899563 -43357020 + MIR SINE MIR 108 183 -79 615 139 59 10 chr2 209899672 209899773 -43356810 + U6 snRNA snRNA 1 106 -1 211 241 0 37 chr2 209900181 209900235 -43356348 + L2 LINE L2 3216 3267 -5 200 250 346 0 chr2 209900679 209900783 -43355800 + L2 LINE L2 2915 3054 -218 1093 189 84 146 chr2 209901448 209902031 -43354552 - L1MC4 LINE L1 -1 8041 7495 193 270 68 98 chr2 209902388 209902551 -43354032 + L2 LINE L2 2550 2707 -607 2242 110 0 0 chr2 209902938 209903228 -43353355 + AluSx SINE Alu 1 290 -22 1991 135 7 3 chr2 209903656 209903953 -43352630 - AluSx SINE Alu -12 300 3 1139 165 152 22 chr2 209905323 209905634 -43350949 - L1MB5 LINE L1 0 6180 5859 2157 109 6 22 chr2 209905834 209906147 -43350436 - AluSx SINE Alu -4 308 1 324 222 46 37 chr2 209906547 209906655 -43349928 - Charlie8 DNA MER1_type -2194 223 115 819 130 111 19 chr2 209906703 209906865 -43349718 + MER21A LTR ERV1 13 189 -742 1721 149 0 74 chr2 209906865 209907188 -43349395 - AluJo SINE Alu -13 299 1 2251 99 3 0 chr2 209907189 209907483 -43349100 - AluSp SINE Alu -18 295 1 2269 112 3 0 chr2 209907486 209907791 -43348792 - AluSx SINE Alu -5 307 2 1817 128 14 30 chr2 209908023 209908319 -43348264 + AluJb SINE Alu 1 291 -21 1813 146 0 20 chr2 209908569 209908863 -43347720 - AluJb SINE Alu -21 291 4 2619 37 0 0 chr2 209908874 209909172 -43347411 - AluY SINE Alu -13 298 1 21 0 0 0 chr2 209909653 209909674 -43346909 + AT_rich Low_complexity Low_complexity 1 21 0 234 255 50 68 chr2 209909785 209909946 -43346637 + L1ME4a LINE L1 5863 6020 -101 22 0 0 0 chr2 209909994 209910016 -43346567 + AT_rich Low_complexity Low_complexity 1 22 0 1960 129 34 0 chr2 209910079 209910373 -43346210 + AluSx SINE Alu 1 304 -8 27 51 0 17 chr2 209910394 209910434 -43346149 + AT_rich Low_complexity Low_complexity 1 41 -17 1850 157 4 4 chr2 209910434 209910715 -43345868 - AluJo SINE Alu -31 281 1 27 51 0 17 chr2 209910715 209910733 -43345850 + AT_rich Low_complexity Low_complexity 41 58 0 1022 295 98 56 chr2 209912448 209913073 -43343510 + L2 LINE L2 1728 2386 -928 1786 151 7 20 chr2 209913073 209913372 -43343211 - AluJb SINE Alu -17 295 1 1022 295 98 56 chr2 209913372 209913437 -43343146 + L2 LINE L2 2386 2447 -867 350 386 53 0 chr2 209913531 209913663 -43342920 + L2 LINE L2 3134 3272 0 2579 59 0 3 chr2 209914814 209915118 -43341465 - AluY SINE Alu -8 303 1 1502 185 131 0 chr2 209915149 209915409 -43341174 + AluJo SINE Alu 1 294 -8 2229 45 11 0 chr2 209915656 209915922 -43340661 - AluSp SINE Alu -1 312 44 2045 133 7 3 chr2 209916354 209916647 -43339936 - AluSx SINE Alu -18 294 1 1982 146 0 7 chr2 209916853 209917147 -43339436 + AluSx SINE Alu 1 292 -20 2156 67 30 0 chr2 209917339 209917642 -43338941 - AluY SINE Alu 0 315 5 2227 130 0 0 chr2 209917646 209917947 -43338636 - AluSx SINE Alu -11 301 1 744 191 32 0 chr2 209917977 209918103 -43338480 - FLAM_C SINE Alu -12 131 2 812 243 62 48 chr2 209918197 209918489 -43338094 + L1MD2 LINE L1 6051 6346 -13 22 0 0 0 chr2 209918637 209918659 -43337924 + AT_rich Low_complexity Low_complexity 1 22 0 2369 115 0 0 chr2 209919129 209919441 -43337142 - AluSx SINE Alu 0 312 1 1257 177 169 4 chr2 209919533 209919781 -43336802 - AluJo SINE Alu -12 290 2 258 259 148 6 chr2 209919798 209919960 -43336623 - L1M4 LINE L1 -1575 4571 4387 2134 127 3 0 chr2 209920012 209920311 -43336272 - AluSx SINE Alu -12 300 1 214 355 40 0 chr2 209920412 209920488 -43336095 + MIR SINE MIR 1 79 -183 23 0 0 0 chr2 209921811 209921834 -43334749 + AT_rich Low_complexity Low_complexity 1 23 0 1683 139 70 0 chr2 209921835 209922094 -43334489 - AluJo SINE Alu -35 277 1 2020 151 0 0 chr2 209922285 209922589 -43333994 - AluJb SINE Alu -8 304 1 180 0 0 0 chr2 209923028 209923048 -43333535 + (A)n Simple_repeat Simple_repeat 1 20 0 3075 187 88 26 chr2 209923756 209923891 -43332692 + MER82 DNA MER2_type 4 129 -524 2183 119 0 3 chr2 209923891 209924202 -43332381 - AluSx SINE Alu -2 310 1 3075 187 88 26 chr2 209924202 209924677 -43331906 + MER82 DNA MER2_type 129 652 -1 1604 169 11 4 chr2 209924730 209925008 -43331575 + AluJo SINE Alu 14 293 -19 2134 122 3 7 chr2 209925408 209925712 -43330871 - AluSx SINE Alu -9 303 1 960 92 0 0 chr2 209925827 209925947 -43330636 + AluSg/x SINE Alu 131 250 -62 1860 153 18 0 chr2 209926110 209926392 -43330191 + AluJo SINE Alu 1 287 -25 241 200 0 0 chr2 209927664 209927709 -43328874 + Alu SINE Alu 6 50 -249 1675 187 14 0 chr2 209927747 209928036 -43328547 - AluSx SINE Alu -19 293 1 37 18 0 18 chr2 209928036 209928065 -43328518 + AT_rich Low_complexity Low_complexity 1 30 -24 2089 73 42 28 chr2 209928065 209928352 -43328231 + AluYa5 SINE Alu 1 291 -20 37 18 0 18 chr2 209928352 209928377 -43328206 + AT_rich Low_complexity Low_complexity 30 54 0 1965 95 38 0 chr2 209928377 209928640 -43327943 - AluSx SINE Alu -39 273 1 22 56 0 0 chr2 209928690 209928726 -43327857 + AT_rich Low_complexity Low_complexity 1 36 0 2220 125 0 0 chr2 209928726 209929023 -43327560 + AluSx SINE Alu 1 297 -15 2558 62 0 3 chr2 209929184 209929490 -43327093 + AluY SINE Alu 1 305 -6 2093 111 35 0 chr2 209929615 209929903 -43326680 - AluSx SINE Alu -14 298 1 202 324 93 28 chr2 209929928 209930036 -43326547 - L2 LINE L2 -556 2758 2644 574 310 50 67 chr2 209930086 209930161 -43326422 - L2 LINE L2 -785 2529 2454 1513 185 40 23 chr2 209930161 209930464 -43326119 + AluJb SINE Alu 1 308 -4 574 310 50 67 chr2 209930464 209930746 -43325837 - L2 LINE L2 -860 2454 2178 180 0 0 0 chr2 209931159 209931179 -43325404 + (T)n Simple_repeat Simple_repeat 1 20 0 458 167 51 0 chr2 209931190 209931268 -43325315 - AluJ/FLAM SINE Alu -228 84 3 23 54 0 0 chr2 209931646 209931683 -43324900 + AT_rich Low_complexity Low_complexity 1 37 0 22 35 0 0 chr2 209932513 209932542 -43324041 + AT_rich Low_complexity Low_complexity 1 29 0 2328 99 0 0 chr2 209932987 209933290 -43323293 - AluSg SINE Alu -7 303 1 440 262 71 73 chr2 209933354 209933579 -43323004 + MLT1L LTR MaLR 126 359 -50 180 0 0 0 chr2 209933879 209933899 -43322684 + (T)n Simple_repeat Simple_repeat 1 20 0 772 197 0 8 chr2 209934230 209934362 -43322221 - FLAM_C SINE Alu -12 131 2 1808 164 3 47 chr2 209934963 209935281 -43321302 - AluJo SINE Alu -8 304 1 2276 104 7 0 chr2 209935777 209936075 -43320508 - AluSq SINE Alu -13 300 1 315 320 144 26 chr2 209936614 209936808 -43319775 + MIR SINE MIR 20 236 -26 271 206 41 41 chr2 209936809 209936882 -43319701 + MLT1L LTR MaLR 1 73 -542 590 266 100 21 chr2 209937085 209937326 -43319257 + MLT1L LTR MaLR 356 615 0 23 33 0 0 chr2 209938273 209938303 -43318280 + AT_rich Low_complexity Low_complexity 1 30 0 187 295 0 49 chr2 209938441 209938502 -43318081 - MIR SINE MIR -194 68 11 1514 120 0 5 chr2 209938774 209938982 -43317601 - AluSx SINE Alu -105 207 1 2176 117 7 7 chr2 209939408 209939715 -43316868 + AluSp SINE Alu 1 307 -6 21 71 0 0 chr2 209939830 209939872 -43316711 + AT_rich Low_complexity Low_complexity 1 42 0 894 255 76 20 chr2 209940154 209940456 -43316127 + MER110 LTR ERV1 166 484 -7 1637 190 65 39 chr2 209940687 209941119 -43315464 + LTR47B LTR ERVL 1 443 0 2263 126 0 0 chr2 209941172 209941482 -43315101 + AluSx SINE Alu 1 310 -2 390 312 8 16 chr2 209941631 209941756 -43314827 + MIR SINE MIR 16 139 -69 851 122 7 47 chr2 209942014 209942162 -43314421 + FLAM_C SINE Alu 2 143 0 2018 123 3 50 chr2 209942359 209942676 -43313907 + AluSx SINE Alu 3 304 -8 977 193 0 17 chr2 209942686 209942862 -43313721 + FAM SINE Alu 1 173 -2 201 133 0 0 chr2 209942891 209942921 -43313662 + (CAAAAA)n Simple_repeat Simple_repeat 1 30 0 21 0 0 0 chr2 209944076 209944097 -43312486 + AT_rich Low_complexity Low_complexity 1 21 0 2157 107 0 3 chr2 209944835 209945125 -43311458 - AluSg SINE Alu -21 289 1 1659 158 19 0 chr2 209945231 209945491 -43311092 - AluJo SINE Alu -46 266 2 913 219 56 14 chr2 209945569 209945784 -43310799 + MER58A DNA MER1_type 1 224 0 1485 179 17 47 chr2 209945928 209946225 -43310358 + AluJb SINE Alu 3 290 -22 237 193 114 11 chr2 209946251 209946339 -43310244 + MER5C DNA MER1_type 164 260 -64 963 147 33 11 chr2 209946427 209946611 -43309972 - L1M2 LINE L1 -508 5783 5596 772 181 0 15 chr2 209946807 209946940 -43309643 - FLAM_C SINE Alu 0 133 3 2158 122 3 0 chr2 209947560 209947854 -43308729 - AluSx SINE Alu -17 295 1 2098 143 0 13 chr2 209948385 209948555 -43308028 - AluJo SINE Alu -9 303 137 2540 42 0 23 chr2 209948555 209948865 -43307718 - AluY SINE Alu -8 303 1 2098 143 0 13 chr2 209948865 209949001 -43307582 - AluJo SINE Alu -175 137 1 2161 119 0 26 chr2 209949211 209949522 -43307061 - AluSx SINE Alu -8 304 2 2321 109 0 7 chr2 209949609 209949913 -43306670 + AluSx SINE Alu 1 302 -10 22 0 0 0 chr2 209950411 209950433 -43306150 + AT_rich Low_complexity Low_complexity 1 22 0 1963 132 10 0 chr2 209950703 209950991 -43305592 + AluY SINE Alu 1 291 -20 594 172 112 80 chr2 209951135 209951385 -43305198 + Charlie1b DNA MER1_type 58 315 -208 384 342 114 10 chr2 209951405 209951607 -43304976 - L1ME LINE L1 -566 5596 5374 228 190 17 0 chr2 209951615 209951673 -43304910 - L1ME LINE L1 -917 5229 5171 3420 159 54 63 chr2 209951705 209952746 -43303837 - L1MC1 LINE L1 -360 5973 4904 2341 63 0 7 chr2 209952893 209953213 -43303370 - AluY SINE Alu 0 318 1 22 0 0 0 chr2 209953456 209953478 -43303105 + AT_rich Low_complexity Low_complexity 1 22 0 1994 157 0 7 chr2 209953481 209953786 -43302797 + AluJb SINE Alu 1 303 -9 1719 140 21 40 chr2 209954036 209954365 -43302218 + L1MB2 LINE L1 5446 5768 -403 449 216 8 24 chr2 209954365 209954487 -43302096 + L1MB2 LINE L1 6030 6152 -19 1140 178 0 11 chr2 209954487 209954667 -43301916 - AluJb SINE Alu -30 282 105 2334 115 0 3 chr2 209954672 209954986 -43301597 - AluSq SINE Alu 0 313 1 857 184 12 80 chr2 209955242 209955492 -43301091 + MER106A DNA MER1_type 1 233 -3 390 91 0 0 chr2 209955537 209955592 -43300991 + (TAAA)n Simple_repeat Simple_repeat 3 57 0 22 35 0 0 chr2 209956690 209956719 -43299864 + AT_rich Low_complexity Low_complexity 1 29 0 1404 168 12 95 chr2 209956720 209957047 -43299536 - AluJb SINE Alu -12 300 1 1162 183 4 64 chr2 209957047 209957282 -43299301 - AluJo SINE Alu -91 221 1 698 213 0 0 chr2 209957302 209957424 -43299159 + FRAM SINE Alu 25 146 -30 234 0 0 0 chr2 209957426 209957452 -43299131 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 2347 99 25 16 chr2 209957469 209957832 -43298751 + L1PA8 LINE L1 5796 6161 -11 23 33 0 0 chr2 209958255 209958285 -43298298 + AT_rich Low_complexity Low_complexity 1 30 0 1138 217 5 5 chr2 209959711 209959928 -43296655 - AluJo SINE Alu -87 225 9 358 214 83 0 chr2 209960326 209960410 -43296173 - MIR SINE MIR -18 244 154 886 166 53 6 chr2 209960435 209960604 -43295979 + AluJb SINE Alu 1 177 -135 1676 190 24 3 chr2 209960635 209960930 -43295653 - AluJb SINE Alu -11 301 1 187 29 0 59 chr2 209961000 209961034 -43295549 + (TAAAAA)n Simple_repeat Simple_repeat 1 32 0 287 211 45 154 chr2 209961177 209961333 -43295250 - MIR SINE MIR -6 256 118 2130 122 3 0 chr2 209961431 209961726 -43294857 - AluSc SINE Alu -12 297 2 1398 135 124 29 chr2 209961824 209962098 -43294485 - AluJb SINE Alu -6 306 7 278 293 16 122 chr2 209962108 209962296 -43294287 - L3 LINE CR1 -250 1327 1160 225 341 33 11 chr2 209963078 209963169 -43293414 + MIR SINE MIR 6 98 -164 2494 62 3 0 chr2 209964628 209964936 -43291647 + AluSp SINE Alu 1 309 -4 249 399 39 50 chr2 209965307 209965590 -43290993 - L2 LINE L2 -43 3229 2950 876 192 0 29 chr2 209965977 209966149 -43290434 + FAM SINE Alu 1 45 -4 1837 167 0 0 chr2 209966211 209966505 -43290078 - AluJb SINE Alu -18 294 1 2181 127 3 0 chr2 209967144 209967451 -43289132 + AluSp SINE Alu 1 308 -5 306 292 33 25 chr2 209967645 209967765 -43288818 + HAL1 LINE L1 559 679 -1828 30 27 0 0 chr2 209968210 209968247 -43288336 + AT_rich Low_complexity Low_complexity 1 37 0 661 174 7 29 chr2 209968672 209968810 -43287773 + AluJo SINE Alu 1 135 -177 722 289 211 17 chr2 209969050 209969639 -43286944 - L2 LINE L2 -459 2855 2153 566 196 92 98 chr2 209970138 209970266 -43286317 - MER5B DNA MER1_type -6 172 44 2247 100 3 7 chr2 209970266 209970565 -43286018 - AluSq SINE Alu -13 300 3 566 196 92 98 chr2 209970565 209970609 -43285974 - MER5B DNA MER1_type -134 44 1 2467 89 0 0 chr2 209970965 209971288 -43285295 + AluSq SINE Alu 1 313 0 2200 69 36 23 chr2 209971343 209971648 -43284935 + AluY SINE Alu 1 309 -2 2011 123 55 0 chr2 209971854 209972147 -43284436 - AluSx SINE Alu -3 309 1 562 185 166 6 chr2 209972428 209972585 -43283998 - MER105 DNA DNA -2 202 21 749 225 125 38 chr2 209972723 209972963 -43283620 + MIR SINE MIR 2 262 0 309 109 0 0 chr2 209973038 209973084 -43283499 + (TG)n Simple_repeat Simple_repeat 2 47 0 2366 112 0 0 chr2 209973173 209973485 -43283098 - AluSq SINE Alu -1 312 1 22 0 0 0 chr2 209977652 209977674 -43278909 + AT_rich Low_complexity Low_complexity 1 22 0 308 224 106 87 chr2 209977936 209978097 -43278486 + MIR3 SINE MIR 43 206 -2 1914 139 7 7 chr2 209978222 209978510 -43278073 + AluJb SINE Alu 1 288 -24 209 227 0 0 chr2 209979055 209979099 -43277484 + (TA)n Simple_repeat Simple_repeat 1 44 0 2432 90 0 3 chr2 209979117 209979427 -43277156 - AluSg SINE Alu -1 309 1 201 158 0 0 chr2 209979677 209979715 -43276868 + T-rich Low_complexity Low_complexity 1 38 0 386 69 17 0 chr2 209979902 209979960 -43276623 + (CA)n Simple_repeat Simple_repeat 2 60 0 22 35 0 0 chr2 209983013 209983042 -43273541 + AT_rich Low_complexity Low_complexity 1 29 0 2380 83 7 3 chr2 209983409 209983710 -43272873 - AluSx SINE Alu -10 302 1 2079 159 0 0 chr2 209984684 209984992 -43271591 - AluJb SINE Alu -4 308 1 1301 210 9 0 chr2 209985259 209985488 -43271095 + AluJo SINE Alu 5 235 -77 1496 180 8 0 chr2 209985517 209985756 -43270827 + AluJo SINE Alu 35 275 -37 22 0 0 0 chr2 209985886 209985908 -43270675 + AT_rich Low_complexity Low_complexity 1 22 0 1888 155 7 10 chr2 209986031 209986334 -43270249 + AluJb SINE Alu 1 302 -10 21 0 0 0 chr2 209987094 209987115 -43269468 + AT_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr2 209987596 209987632 -43268951 + AT_rich Low_complexity Low_complexity 1 36 0 22 80 0 0 chr2 209990117 209990167 -43266416 + AT_rich Low_complexity Low_complexity 1 50 0 1926 159 0 3 chr2 209990183 209990472 -43266111 + AluJb SINE Alu 1 288 -24 414 277 132 89 chr2 209990744 209991047 -43265536 - L1ME LINE L1 -321 5800 5485 2010 145 0 23 chr2 209991051 209991222 -43265361 - AluSx SINE Alu -9 303 141 2170 110 3 3 chr2 209991222 209991522 -43265061 - AluSg1 SINE Alu -9 300 1 2010 145 0 23 chr2 209991522 209991660 -43264923 - AluSx SINE Alu -171 141 1 1914 155 13 28 chr2 209991840 209991978 -43264605 + AluSx SINE Alu 1 140 -172 2064 91 0 0 chr2 209991978 209992242 -43264341 + AluY SINE Alu 39 302 -9 1914 155 13 28 chr2 209992242 209992420 -43264163 + AluSx SINE Alu 140 312 0 298 189 0 0 chr2 209992431 209992484 -43264099 + Alu SINE Alu 1 53 -249 431 207 7 160 chr2 209993737 209993887 -43262696 - L2 LINE L2 0 3313 3187 316 297 86 51 chr2 209993925 209994100 -43262483 + Charlie2 DNA MER1_type 183 363 -2499 1450 188 80 78 chr2 209994113 209994352 -43262231 + Charlie2 DNA MER1_type 2232 2469 -393 2128 55 62 22 chr2 209994352 209994647 -43261936 + AluY SINE Alu 1 306 0 1450 188 80 78 chr2 209994647 209994891 -43261692 + Charlie2 DNA MER1_type 2469 2720 -142 1911 104 37 37 chr2 209994891 209995189 -43261394 - AluSx SINE Alu -14 298 1 1450 188 80 78 chr2 209995189 209995332 -43261251 + Charlie2 DNA MER1_type 2720 2861 -1 1830 185 6 22 chr2 209995371 209995685 -43260898 + AluJo SINE Alu 1 309 -3 2059 202 113 35 chr2 209995983 209996533 -43260050 + MLT1E LTR MaLR 1 593 0 1934 131 47 3 chr2 209996674 209996971 -43259612 - AluSx SINE Alu -2 310 1 1479 210 11 0 chr2 209996999 209997270 -43259313 + AluSx SINE Alu 2 275 -37 1582 193 30 7 chr2 209997634 209997939 -43258644 + AluJo SINE Alu 1 312 0 434 222 176 0 chr2 209997959 209998067 -43258516 + L2 LINE L2 3183 3309 -4 2176 106 0 3 chr2 209998408 209998692 -43257891 + AluSc SINE Alu 1 283 -26 189 0 0 0 chr2 209998692 209998713 -43257870 + (CAAT)n Simple_repeat Simple_repeat 2 22 0 346 420 66 32 chr2 209998838 209999278 -43257305 + L2 LINE L2 2818 3272 0 267 271 76 69 chr2 209999311 209999455 -43257128 + MER5B DNA MER1_type 2 146 -32 422 130 0 13 chr2 209999457 209999534 -43257049 + L1MC4 LINE L1 7967 8042 0 567 317 181 8 chr2 209999546 209999906 -43256677 + HAL1 LINE L1 347 768 -1739 21 0 0 0 chr2 209999928 209999949 -43256634 + AT_rich Low_complexity Low_complexity 1 21 0 2290 97 0 13 chr2 210000043 210000342 -43256241 - AluSq SINE Alu -18 295 1 227 253 66 11 chr2 210000342 210000433 -43256150 + HAL1 LINE L1 811 906 -1601 2369 92 13 0 chr2 210000434 210000737 -43255846 + AluSg SINE Alu 1 307 -3 1320 154 42 98 chr2 210000751 210001057 -43255526 + AluJo SINE Alu 10 298 -14 1183 202 31 14 chr2 210001148 210001435 -43255148 + L1MB7 LINE L1 5417 5708 -466 925 188 83 16 chr2 210001446 210001504 -43255079 + MLT1A1 LTR MaLR 31 84 -281 2113 125 0 13 chr2 210001504 210001808 -43254775 + AluSx SINE Alu 1 300 -12 925 188 83 16 chr2 210001808 210002038 -43254545 + MLT1A1 LTR MaLR 84 361 -4 1181 142 29 33 chr2 210002042 210002282 -43254301 + L1MB7 LINE L1 5703 5941 -243 2251 117 7 0 chr2 210002316 210002624 -43253959 - AluSx SINE Alu -2 310 1 282 52 24 0 chr2 210002627 210002675 -43253908 + L1MB7 LINE L1 6124 6178 0 772 138 0 76 chr2 210002804 210002949 -43253634 + FLAM_C SINE Alu 1 134 -9 808 263 48 46 chr2 210002973 210003179 -43253404 + L1MC4a LINE L1 5402 5606 -2202 2449 68 3 0 chr2 210003179 210003475 -43253108 - AluSg SINE Alu -13 297 1 808 263 48 46 chr2 210003475 210003706 -43252877 + L1MC4a LINE L1 5606 5840 -1968 1406 194 66 7 chr2 210003728 210004001 -43252582 - AluJo SINE Alu -23 289 1 416 169 0 0 chr2 210004029 210004100 -43252483 + AluSg/x SINE Alu 174 244 -66 2294 79 0 0 chr2 210004100 210004377 -43252206 + AluSg SINE Alu 20 296 -14 2297 87 7 16 chr2 210004458 210004768 -43251815 - AluSq SINE Alu -6 307 1 4691 212 55 83 chr2 210004768 210005386 -43251197 + MER21-int LTR ERV1 2516 3150 -1041 2473 66 0 7 chr2 210005386 210005689 -43250894 + AluY SINE Alu 1 301 -10 4691 212 55 83 chr2 210005689 210006477 -43250106 + MER21-int LTR ERV1 3150 3958 -233 2378 94 0 3 chr2 210006477 210006784 -43249799 - AluSg SINE Alu -4 306 1 1999 111 10 42 chr2 210006784 210007089 -43249494 - AluSx SINE Alu -15 297 2 4691 212 55 83 chr2 210007089 210007347 -43249236 + MER21-int LTR ERV1 3956 4136 -55 2098 154 5 22 chr2 210007844 210008215 -43248368 - MER47A DNA MER2_type 0 366 2 1135 241 83 45 chr2 210008380 210008807 -43247776 + MER77 LTR ERV1 182 673 -1 765 189 0 8 chr2 210009131 210009263 -43247320 + FLAM_A SINE Alu 1 131 -2 1753 170 0 28 chr2 210009265 210009553 -43247030 + AluJo SINE Alu 1 280 -32 180 158 0 0 chr2 210009556 210009594 -43246989 + (CATA)n Simple_repeat Simple_repeat 1 38 0 2040 151 0 0 chr2 210010120 210010412 -43246171 - AluSx SINE Alu -20 292 1 2322 96 0 3 chr2 210010474 210010786 -43245797 + AluY SINE Alu 1 311 0 59 46 0 0 chr2 210011395 210011482 -43245101 + AT_rich Low_complexity Low_complexity 1 87 0 2235 108 0 22 chr2 210011517 210011800 -43244783 + AluSg SINE Alu 1 278 -32 207 0 0 0 chr2 210011800 210011823 -43244760 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2235 108 0 22 chr2 210011823 210011855 -43244728 + AluSg SINE Alu 278 309 -1 836 155 23 6 chr2 210012576 210012750 -43243833 - L1MA9 LINE L1 0 6312 6136 1934 148 3 3 chr2 210012830 210013134 -43243449 + AluJb SINE Alu 1 304 -8 2247 111 0 0 chr2 210013315 210013604 -43242979 + AluSq SINE Alu 1 289 -24 288 0 0 0 chr2 210013605 210013637 -43242946 + (CA)n Simple_repeat Simple_repeat 2 33 0 1945 132 9 44 chr2 210013839 210014157 -43242426 + AluSx SINE Alu 1 307 -5 207 279 191 0 chr2 210014916 210014984 -43241599 - L2 LINE L2 -2 3270 3190 432 242 33 25 chr2 210015175 210015295 -43241288 - MIR SINE MIR -122 140 20 274 388 78 29 chr2 210016403 210016787 -43239796 + L2 LINE L2 2865 3267 -5 23 0 0 0 chr2 210016798 210016821 -43239762 + AT_rich Low_complexity Low_complexity 1 23 0 1830 167 28 0 chr2 210016945 210017233 -43239350 - AluJb SINE Alu -16 296 1 2230 122 0 10 chr2 210017241 210017553 -43239030 - AluSx SINE Alu -3 309 1 685 219 68 0 chr2 210019345 210019491 -43237092 + FRAM SINE Alu 1 156 -20 224 377 70 18 chr2 210019511 210019625 -43236958 - MIR3 SINE MIR -83 125 6 1847 174 0 13 chr2 210020123 210020427 -43236156 + AluJb SINE Alu 1 300 -12 1639 176 36 16 chr2 210020460 210020766 -43235817 + AluJo SINE Alu 1 312 0 567 320 81 38 chr2 210020975 210021372 -43235211 - L2 LINE L2 -1414 1900 1487 2205 103 0 7 chr2 210021423 210021714 -43234869 - AluSc SINE Alu -15 294 6 2322 95 3 3 chr2 210023719 210024023 -43232560 + AluSx SINE Alu 1 304 -8 1680 176 10 3 chr2 210024861 210025157 -43231426 + AluJo SINE Alu 1 298 -14 1844 142 25 14 chr2 210025486 210025787 -43230796 + AluJb SINE Alu 1 304 0 317 348 36 29 chr2 210025931 210026069 -43230514 - L2 LINE L2 0 3272 3134 298 107 36 0 chr2 210026090 210026146 -43230437 + GA-rich Low_complexity Low_complexity 1 58 0 782 178 0 40 chr2 210026429 210026581 -43230002 + AluJo SINE Alu 1 146 -166 24384 53 11 1 chr2 210026581 210030585 -43225998 + L1PA6 LINE L1 2099 6145 -9 946 211 0 0 chr2 210030585 210030756 -43225827 + AluJo SINE Alu 129 299 -13 24 53 0 0 chr2 210030973 210031011 -43225572 + AT_rich Low_complexity Low_complexity 1 38 0 483 286 114 62 chr2 210031020 210031235 -43225348 - L1ME4a LINE L1 -70 6051 5849 2245 118 0 0 chr2 210031235 210031531 -43225052 - AluSx SINE Alu -16 296 1 483 286 114 62 chr2 210031531 210031780 -43224803 - L1ME4a LINE L1 -272 5849 5563 2033 139 10 0 chr2 210032022 210032323 -43224260 + AluSp SINE Alu 1 304 -9 2097 109 3 3 chr2 210032605 210032914 -43223669 - AluSx SINE Alu 0 309 1 318 332 79 13 chr2 210033077 210033306 -43223277 - L1ME4a LINE L1 -1562 4584 4341 1247 144 24 34 chr2 210033322 210033530 -43223053 - AluJo SINE Alu -20 292 87 21 82 0 0 chr2 210033552 210033601 -43222982 + AT_rich Low_complexity Low_complexity 1 49 0 426 39 0 0 chr2 210033798 210033850 -43222733 + (TG)n Simple_repeat Simple_repeat 1 52 0 198 0 0 0 chr2 210033849 210033871 -43222712 + (GA)n Simple_repeat Simple_repeat 1 22 0 * 1491 185 7 49 chr2 210033874 210034024 -43222559 - AluJb SINE Alu -37 275 140 2351 53 0 3 chr2 210034024 210034356 -43222227 - AluY SINE Alu 0 331 1 1491 185 7 49 chr2 210034356 210034491 -43222092 - AluJb SINE Alu -172 140 1 254 274 11 63 chr2 210034539 210034634 -43221949 + MER5A DNA MER1_type 94 183 -6 12133 43 3 0 chr2 210034927 210036680 -43219903 - L1P LINE L1 -3664 2482 726 18479 36 2 1 chr2 210036680 210039556 -43217027 + L1PA4 LINE L1 3274 6153 -2 324 313 127 25 chr2 210039662 210039937 -43216646 + L2 LINE L2 2924 3226 -87 324 269 204 10 chr2 210039974 210040175 -43216408 - HsTC2 DNA Tc2 -1078 820 581 241 293 75 38 chr2 210040412 210040545 -43216038 - HsTC2 DNA Tc2 -1757 141 4 2358 78 3 3 chr2 210040545 210040839 -43215744 + AluSc SINE Alu 1 294 -15 790 152 256 59 chr2 210040998 210041138 -43215445 - Charlie1b DNA MER1_type -2379 382 271 2106 120 27 0 chr2 210041138 210041437 -43215146 - AluSx SINE Alu -5 307 1 790 152 256 59 chr2 210041437 210041585 -43214998 - Charlie1b DNA MER1_type -2490 271 37 323 249 249 70 chr2 210041592 210041793 -43214790 + MIR SINE MIR 22 258 -4 * 389 298 82 38 chr2 210041779 210041937 -43214646 - MIR SINE MIR -49 213 49 400 303 111 50 chr2 210041967 210042379 -43214204 + L2 LINE L2 2799 3244 -69 214 296 0 0 chr2 210042460 210042514 -43214069 + MIR SINE MIR 77 130 -78 9281 73 8 97 chr2 210042588 210044102 -43212481 + SVA Other Other 8 1386 0 2553 75 0 0 chr2 210044152 210044460 -43212123 - AluY SINE Alu -3 308 1 822 169 8 0 chr2 210044545 210044669 -43211914 - FLAM_A SINE Alu -7 126 2 627 216 36 0 chr2 210044920 210045031 -43211552 - FLAM_C SINE Alu -23 120 6 504 280 26 43 chr2 210045136 210045367 -43211216 + MIR SINE MIR 35 262 0 22 56 0 0 chr2 210045367 210045403 -43211180 + AT_rich Low_complexity Low_complexity 1 36 0 263 348 0 22 chr2 210045455 210045547 -43211036 - L2 LINE L2 0 3313 3224 469 171 12 0 chr2 210045792 210045874 -43210709 - MER3 DNA MER1_type -122 87 5 362 362 0 8 chr2 210046423 210046550 -43210033 + MIR SINE MIR 21 146 -62 363 288 46 44 chr2 210047515 210047828 -43208755 + L1MCc LINE L1 767 1254 -4965 246 163 23 0 chr2 210047830 210047873 -43208710 + tRNA-Met-e tRNA tRNA 1 44 -31 235 306 16 8 chr2 210047873 210047994 -43208589 + L1M3de LINE L1 1838 1959 -4694 210 143 0 0 chr2 210048098 210048133 -43208450 + (TA)n Simple_repeat Simple_repeat 1 35 0 498 290 62 45 chr2 210048146 210048663 -43207920 + L1MCc LINE L1 1277 1991 -4616 503 233 108 36 chr2 210048832 210049050 -43207533 + L1MCc LINE L1 2234 2478 -4129 1427 102 75 66 chr2 210049050 210049276 -43207307 - MER30 DNA MER1_type 0 230 3 503 233 108 36 chr2 210049276 210049336 -43207247 + L1MCc LINE L1 2478 2532 -4075 789 248 111 58 chr2 210049355 210049499 -43207084 + L1MCc LINE L1 2615 2750 -3676 1477 161 128 4 chr2 210049499 210049602 -43206981 + AluJb SINE Alu 1 90 -222 237 33 0 0 chr2 210049602 210049632 -43206951 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 1477 161 128 4 chr2 210049632 210049802 -43206781 + AluJb SINE Alu 90 308 -4 789 248 111 58 chr2 210049802 210049991 -43206592 + L1MCc LINE L1 2750 2927 -3499 2221 89 3 19 chr2 210049991 210050304 -43206279 - AluSg SINE Alu -1 309 2 789 248 111 58 chr2 210050304 210050437 -43206146 + L1MCc LINE L1 2927 3107 -3319 850 120 0 67 chr2 210050502 210050652 -43205931 - FLAM_C SINE Alu -3 140 1 1122 152 0 52 chr2 210050693 210050904 -43205679 + AluJo SINE Alu 113 312 0 449 304 46 18 chr2 210050915 210051132 -43205451 + L1MCc LINE L1 3669 3891 -2535 867 120 0 0 chr2 210051142 210051267 -43205316 + AluSg/x SINE Alu 179 303 -7 2219 95 0 7 chr2 210051304 210051613 -43204970 + AluSx SINE Alu 1 307 0 2116 233 179 8 chr2 210051624 210052408 -43204175 + L1MCc LINE L1 3938 4855 -1571 294 267 158 10 chr2 210052460 210052561 -43204022 + L1MCc LINE L1 822 937 -5486 1664 246 113 69 chr2 210052595 210052668 -43203915 + L1MCc LINE L1 764 832 -6290 1689 162 4 0 chr2 210052668 210052933 -43203650 + AluJb SINE Alu 1 266 -46 1664 246 113 69 chr2 210052933 210052975 -43203608 + L1MCc LINE L1 832 871 -6251 1925 160 6 10 chr2 210052975 210053287 -43203296 + AluJb SINE Alu 1 311 -1 1664 246 113 69 chr2 210053287 210053779 -43202804 + L1MCc LINE L1 871 1409 -5713 1846 108 0 0 chr2 210053779 210054019 -43202564 - AluSq SINE Alu -17 296 57 1664 246 113 69 chr2 210054019 210054108 -43202475 + L1MCc LINE L1 1409 1493 -5629 2245 114 0 0 chr2 210054335 210054633 -43201950 + AluY SINE Alu 1 298 -13 686 212 5 85 chr2 210054655 210054844 -43201739 + L1M4 LINE L1 540 713 -5829 1034 235 34 17 chr2 210054844 210055078 -43201505 + MER68 LTR ERV1 323 560 -2 830 209 33 16 chr2 210055080 210055262 -43201321 - L1MC5 LINE L1 -1092 6869 6685 860 131 7 36 chr2 210055480 210055617 -43200966 - FLAM_C SINE Alu 0 133 1 669 117 117 0 chr2 210055845 210055973 -43200610 - L1MB2 LINE L1 0 6171 6029 629 73 0 0 chr2 210055974 210056056 -43200527 + AluSp/q SINE Alu 223 304 -9 1793 189 3 0 chr2 210056069 210056376 -43200207 + AluJo SINE Alu 1 308 -4 803 277 25 90 chr2 210056376 210056432 -43200151 + HERVL LTR ERVL 2911 2969 -2685 826 183 0 0 chr2 210056432 210056558 -43200025 + FLAM_A SINE Alu 1 126 -7 2316 52 3 24 chr2 210056559 210056880 -43199703 + AluY SINE Alu 1 315 0 803 277 25 90 chr2 210056880 210057045 -43199538 + HERVL LTR ERVL 2969 3106 -2548 2463 80 3 0 chr2 210057045 210057346 -43199237 + AluSp SINE Alu 1 302 -11 803 277 25 90 chr2 210057346 210057477 -43199106 + HERVL LTR ERVL 3106 3244 -2410 817 217 62 18 chr2 210057496 210057703 -43198880 - MER20 DNA MER1_type 0 219 4 593 240 177 6 chr2 210057703 210057878 -43198705 + HERVL LTR ERVL 3301 3505 -2259 418 263 147 70 chr2 210057901 210058228 -43198355 + MLT1I LTR MaLR 52 403 -6 564 317 80 18 chr2 210058236 210058460 -43198123 + HERVL LTR ERVL 3510 3747 -2017 251 343 35 7 chr2 210058685 210058828 -43197755 + L2 LINE L2 2904 3050 -222 452 227 72 87 chr2 210058908 210059081 -43197502 + Charlie4 DNA MER1_type 14 185 -323 1879 144 24 0 chr2 210059081 210059372 -43197211 + AluSx SINE Alu 1 298 -14 452 227 72 87 chr2 210059372 210059405 -43197178 + Charlie4 DNA MER1_type 185 217 -291 1384 227 50 68 chr2 210059512 210059953 -43196630 + MLT2B1 LTR ERVL 88 520 0 2227 97 7 0 chr2 210060416 210060705 -43195878 + AluSq SINE Alu 1 291 -22 311 372 58 0 chr2 210060719 210060840 -43195743 + L2 LINE L2 3140 3267 -5 1179 259 104 48 chr2 210060900 210061382 -43195201 + MLT1J LTR MaLR 1 509 -2 1960 118 34 14 chr2 210061804 210062100 -43194483 + AluSx SINE Alu 1 302 -10 49 32 0 0 chr2 210062280 210062343 -43194240 + AT_rich Low_complexity Low_complexity 1 63 0 1818 174 3 0 chr2 210062476 210062763 -43193820 + AluJb SINE Alu 1 288 -24 1741 160 21 21 chr2 210062889 210063019 -43193564 + AluJo SINE Alu 1 130 -182 2460 63 0 10 chr2 210063019 210063319 -43193264 + AluY SINE Alu 1 297 -14 1741 160 21 21 chr2 210063319 210063476 -43193107 + AluJo SINE Alu 129 288 -24 28 0 0 0 chr2 210063476 210063504 -43193079 + AT_rich Low_complexity Low_complexity 1 28 0 185 65 32 0 chr2 210063508 210063539 -43193044 + (TA)n Simple_repeat Simple_repeat 1 32 0 202 225 0 0 chr2 210063594 210063634 -43192949 + (CTA)n Simple_repeat Simple_repeat 1 40 0 286 381 0 0 chr2 210064346 210064514 -43192069 + (TGG)n Simple_repeat Simple_repeat 1 168 0 3290 194 96 1 chr2 210065452 210066132 -43190451 - L1MD2 LINE L1 0 6359 5616 210 276 35 0 chr2 210066150 210066208 -43190375 - MIR SINE MIR -170 92 33 330 297 73 42 chr2 210066380 210066545 -43190038 - L2 LINE L2 -940 2374 2205 2095 144 13 0 chr2 210066721 210067026 -43189557 - AluSx SINE Alu -3 309 1 2205 92 3 10 chr2 210068655 210068958 -43187625 + AluSp SINE Alu 1 301 -12 494 79 13 0 chr2 210070196 210070272 -43186311 + (CA)n Simple_repeat Simple_repeat 2 78 0 37 52 0 0 chr2 210070857 210070915 -43185668 + AT_rich Low_complexity Low_complexity 1 58 0 2482 48 3 0 chr2 210071024 210071318 -43185265 + AluSp SINE Alu 2 296 -17 625 240 81 135 chr2 210073384 210073521 -43183062 - L1ME3A LINE L1 -1 6169 6026 1273 166 21 17 chr2 210073521 210073756 -43182827 + MER106A DNA MER1_type 1 236 0 625 240 81 135 chr2 210073756 210074138 -43182445 - L1ME3A LINE L1 -144 6026 5678 2203 88 0 17 chr2 210074139 210074433 -43182150 + AluSc SINE Alu 1 289 -20 28 0 0 0 chr2 210074473 210074501 -43182082 + AT_rich Low_complexity Low_complexity 1 28 0 412 154 17 103 chr2 210074517 210074591 -43181992 - Charlie5 DNA MER1_type -283 2341 2279 2132 131 0 10 chr2 210074591 210074905 -43181678 - AluSx SINE Alu -1 311 1 412 154 17 103 chr2 210074905 210074947 -43181636 - Charlie5 DNA MER1_type -345 2279 2235 * 476 123 247 11 chr2 210074945 210075059 -43181524 - Charlie5 DNA MER1_type -2491 121 1 444 187 41 81 chr2 210075064 210075107 -43181476 - L1ME3A LINE L1 -529 5641 5598 2327 100 3 0 chr2 210075107 210075408 -43181175 - AluSx SINE Alu -10 302 1 444 187 41 81 chr2 210075408 210075487 -43181096 - L1ME3A LINE L1 -572 5598 5524 278 257 108 0 chr2 210075522 210075596 -43180987 - MIR SINE MIR -87 175 94 206 170 0 57 chr2 210075687 210075716 -43180867 + A-rich Low_complexity Low_complexity 4 30 -23 825 174 0 0 chr2 210075716 210075848 -43180735 + FLAM_C SINE Alu 1 132 -1 206 170 0 57 chr2 210075848 210075871 -43180712 + A-rich Low_complexity Low_complexity 30 53 0 2359 86 0 3 chr2 210075936 210076240 -43180343 + AluY SINE Alu 1 303 -8 1240 147 18 32 chr2 210076895 210077113 -43179470 + AluJo SINE Alu 23 237 -75 261 0 0 0 chr2 210077137 210077166 -43179417 + (TA)n Simple_repeat Simple_repeat 1 29 0 835 97 18 0 chr2 210077286 210077399 -43179184 - AluSg/x SINE Alu -24 286 172 2321 85 10 7 chr2 210077471 210077777 -43178806 + AluSp SINE Alu 1 307 -6 21 36 0 0 chr2 210077894 210077922 -43178661 + AT_rich Low_complexity Low_complexity 1 28 0 28 0 0 0 chr2 210078017 210078045 -43178538 + AT_rich Low_complexity Low_complexity 1 28 0 1948 173 28 14 chr2 210078150 210078514 -43178069 + MER58D DNA MER1_type 1 369 -17 2413 80 0 0 chr2 210078673 210078975 -43177608 + AluY SINE Alu 1 302 -9 739 225 37 11 chr2 210078975 210079166 -43177417 + MIR SINE MIR 17 212 -50 244 258 75 0 chr2 210079259 210079352 -43177231 + L1ME4a LINE L1 5977 6076 -45 2295 102 0 0 chr2 210079790 210080095 -43176488 - AluSc SINE Alu -4 305 1 1750 183 24 0 chr2 210080105 210080395 -43176188 - AluJb SINE Alu -15 297 1 259 189 7 0 chr2 210080404 210080467 -43176116 - L1ME1 LINE L1 -1 6183 6112 412 116 72 0 chr2 210080494 210080563 -43176020 + U6 snRNA snRNA 1 74 -33 3835 202 80 108 chr2 210080584 210080947 -43175636 - L1M4 LINE L1 -912 5234 4862 1620 185 3 7 chr2 210080947 210081234 -43175349 + AluJo SINE Alu 9 294 -18 3835 202 80 108 chr2 210081234 210081352 -43175231 - L1M4 LINE L1 -1284 4862 4742 2381 89 3 0 chr2 210081352 210081655 -43174928 - AluY SINE Alu -7 304 1 3835 202 80 108 chr2 210081655 210081854 -43174729 - L1M4 LINE L1 -1404 4742 4539 2185 122 3 0 chr2 210081854 210082150 -43174433 + AluSx SINE Alu 1 297 -15 3835 202 80 108 chr2 210082150 210082291 -43174292 - L1M4 LINE L1 -1607 4539 4396 207 0 0 0 chr2 210082291 210082314 -43174269 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 2084 112 0 21 chr2 210082319 210082468 -43174115 - AluSx SINE Alu -30 282 140 2449 77 0 3 chr2 210082468 210082768 -43173815 - AluY SINE Alu -12 299 1 2084 112 0 21 chr2 210082768 210082905 -43173678 - AluSx SINE Alu -172 140 2 270 0 0 0 chr2 210082906 210082936 -43173647 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3835 202 80 108 chr2 210082936 210082949 -43173634 - L1M4 LINE L1 -1754 4392 4380 1556 194 0 0 chr2 210082949 210083217 -43173366 - AluJb SINE Alu -44 268 1 3835 202 80 108 chr2 210083217 210083352 -43173231 - L1M4 LINE L1 -1766 4380 4243 2940 6 0 0 chr2 210083352 210083665 -43172918 - AluYb8 SINE Alu -5 313 1 3835 202 80 108 chr2 210083665 210084000 -43172583 - L1M4 LINE L1 -1903 4243 3964 2211 95 27 0 chr2 210084000 210084295 -43172288 - AluSp SINE Alu -6 307 5 3835 202 80 108 chr2 210084295 210084528 -43172055 - L1M4 LINE L1 -2182 3964 3726 1956 136 4 11 chr2 210084528 210084661 -43171922 + AluSx SINE Alu 3 135 -177 2217 116 0 3 chr2 210084661 210084964 -43171619 + AluSg SINE Alu 1 302 -8 1956 136 4 11 chr2 210084964 210085110 -43171473 + AluSx SINE Alu 135 280 -32 201 74 0 0 chr2 210085112 210085139 -43171444 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1008 155 7 0 chr2 210085139 210085287 -43171296 + AluSg/x SINE Alu 132 280 -32 414 175 12 0 chr2 210085303 210085383 -43171200 - L1M4 LINE L1 -2409 3737 3657 251 307 78 60 chr2 210085610 210085776 -43170807 - MIR SINE MIR -60 202 34 180 125 0 0 chr2 210086558 210086590 -43169993 + (T)n Simple_repeat Simple_repeat 1 32 0 2443 64 0 14 chr2 210086647 210086942 -43169641 - AluY SINE Alu -20 291 1 1477 139 147 18 chr2 210087131 210087404 -43169179 - AluJb SINE Alu -4 308 1 1886 129 0 0 chr2 210087440 210087726 -43168857 + AluSx SINE Alu 18 303 -9 1845 146 10 7 chr2 210087799 210088107 -43168476 - AluSq SINE Alu 0 313 5 24 32 0 0 chr2 210088249 210088280 -43168303 + AT_rich Low_complexity Low_complexity 1 31 0 1797 163 3 3 chr2 210088285 210088591 -43167992 - AluJb SINE Alu -2 310 5 391 128 85 0 chr2 210088668 210088762 -43167821 + L1MEc LINE L1 2173 2274 -4122 2296 85 7 0 chr2 210088779 210089085 -43167498 - AluSx SINE Alu -4 308 1 1590 175 7 0 chr2 210089114 210089399 -43167184 + AluJb SINE Alu 1 287 -25 622 262 117 4 chr2 210089480 210089728 -43166855 + L1MEc LINE L1 2384 2659 -3556 1661 148 0 48 chr2 210089733 210090043 -43166540 + AluJb SINE Alu 6 300 -12 360 297 140 47 chr2 210090078 210090170 -43166413 + Charlie7 DNA MER1_type 30 112 -2500 2184 96 0 29 chr2 210090170 210090482 -43166101 + AluSc SINE Alu 1 303 -6 360 297 140 47 chr2 210090482 210090689 -43165894 + Charlie7 DNA MER1_type 112 357 -2255 1592 98 16 12 chr2 210090724 210090969 -43165614 - AluSg/x SINE Alu -1 311 66 769 115 0 0 chr2 210090974 210091078 -43165505 - AluSq/x SINE Alu -205 108 5 1634 165 18 3 chr2 210091092 210091377 -43165206 - AluJb SINE Alu -23 289 1 980 167 173 49 chr2 210091384 210091606 -43164977 + Charlie7 DNA MER1_type 355 633 -1979 2209 94 3 10 chr2 210091606 210091915 -43164668 + AluSx SINE Alu 3 309 -3 980 167 173 49 chr2 210091915 210092021 -43164562 + Charlie7 DNA MER1_type 633 724 -1888 1926 126 3 28 chr2 210092070 210092387 -43164196 - AluSx SINE Alu -3 309 1 2236 88 0 0 chr2 210092509 210092804 -43163779 + AluSx SINE Alu 1 295 -17 963 188 34 10 chr2 210092805 210093012 -43163571 + AluJo SINE Alu 1 212 -100 22 0 0 0 chr2 210093047 210093069 -43163514 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 210093138 210093159 -43163424 + AT_rich Low_complexity Low_complexity 1 21 0 1593 177 3 32 chr2 210093161 210093477 -43163106 + AluJo SINE Alu 1 307 -5 1969 104 7 0 chr2 210093593 210093871 -43162712 + AluSx SINE Alu 1 280 -32 240 35 0 0 chr2 210093871 210093900 -43162683 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 30 0 0 0 chr2 210094068 210094098 -43162485 + AT_rich Low_complexity Low_complexity 1 30 0 1418 66 10 5 chr2 210094505 210094701 -43161882 - AluSq SINE Alu -6 307 111 958 84 0 0 chr2 210094703 210094834 -43161749 + AluSp/q SINE Alu 178 308 -5 2642 32 0 0 chr2 210095047 210095357 -43161226 + AluY SINE Alu 1 310 -1 2113 118 14 26 chr2 210095357 210095703 -43160880 + L1PA14 LINE L1 5820 6161 0 2004 123 0 13 chr2 210095724 210096026 -43160557 + AluSq SINE Alu 1 298 -15 2147 96 7 0 chr2 210096111 210096402 -43160181 - AluSx SINE Alu -19 293 1 214 203 159 29 chr2 210096463 210096532 -43160051 + L2 LINE L2 3186 3263 -9 881 173 0 7 chr2 210096541 210096691 -43159892 - FAM SINE Alu -29 156 8 2098 114 7 0 chr2 210096704 210097002 -43159581 - AluSq SINE Alu -13 300 1 894 185 6 0 chr2 210097080 210097237 -43159346 - AluJo SINE Alu -154 158 1 2200 92 0 10 chr2 210097332 210097635 -43158948 + AluSx SINE Alu 1 300 -12 2450 57 0 13 chr2 210097705 210098020 -43158563 - AluY SINE Alu 0 311 1 2697 3 0 0 chr2 210098040 210098337 -43158246 - AluYa5 SINE Alu -14 297 1 983 168 6 0 chr2 210098396 210098563 -43158020 + AluSg/x SINE Alu 137 304 -8 1084 106 10 70 chr2 210098566 210098765 -43157818 + 7SLRNA srpRNA srpRNA 134 320 0 29 0 0 0 chr2 210098765 210098794 -43157789 + AT_rich Low_complexity Low_complexity 1 29 0 1984 109 4 0 chr2 210098826 210099100 -43157483 + AluY SINE Alu 5 279 -32 257 106 0 21 chr2 210099103 210099150 -43157433 + (GGGA)n Simple_repeat Simple_repeat 4 49 0 756 192 17 58 chr2 210099162 210099334 -43157249 + FRAM SINE Alu 9 173 -3 2135 87 45 0 chr2 210099424 210099712 -43156871 - AluY SINE Alu -10 301 1 2227 75 0 17 chr2 210099722 210100016 -43156567 - AluSg SINE Alu -21 289 1 1878 122 17 7 chr2 210100043 210100338 -43156245 + AluSq SINE Alu 1 298 -15 1769 179 0 0 chr2 210101269 210101571 -43155012 + AluJo SINE Alu 1 302 -10 2093 80 0 58 chr2 210101787 210102015 -43154568 - L1PB1 LINE L1 0 6151 5944 2046 119 7 13 chr2 210102015 210102318 -43154265 - AluSx SINE Alu -11 301 1 2093 80 0 58 chr2 210102318 210102402 -43154181 - L1PB1 LINE L1 -207 5944 5857 2193 94 17 0 chr2 210102410 210102707 -43153876 - AluSx SINE Alu -10 302 1 2241 98 0 0 chr2 210102844 210103150 -43153433 + AluSx SINE Alu 1 306 -6 747 222 38 41 chr2 210103644 210103723 -43152860 - L1MEc LINE L1 -4996 1500 1422 2012 107 6 28 chr2 210103723 210104042 -43152541 - AluSx SINE Alu 0 312 1 747 222 38 41 chr2 210104042 210104170 -43152413 - L1MEc LINE L1 -5074 1422 1295 2011 131 6 6 chr2 210104170 210104482 -43152101 - AluSx SINE Alu 0 312 1 747 222 38 41 chr2 210104482 210104635 -43151948 - L1MEc LINE L1 -5201 1295 1026 774 164 16 8 chr2 210104637 210104765 -43151818 - FLAM_C SINE Alu -13 130 2 1490 195 27 10 chr2 210104776 210105068 -43151515 - AluJo SINE Alu -15 297 1 343 264 107 8 chr2 210105069 210105190 -43151393 - L1MEc LINE L1 -5356 1040 908 363 158 11 74 chr2 210105235 210105330 -43151253 - L1MEc LINE L1 -5481 915 827 292 190 17 0 chr2 210105331 210105389 -43151194 - FAM SINE Alu -2 177 119 402 99 37 62 chr2 210105393 210105474 -43151109 - L1MEc LINE L1 -6279 117 39 1674 153 59 0 chr2 210105575 210105863 -43150720 + AluJb SINE Alu 1 305 -7 1955 146 0 0 chr2 210106201 210106496 -43150087 + AluSx SINE Alu 1 295 -17 886 219 22 40 chr2 210106515 210106733 -43149850 - L1MC4 LINE L1 -51 7991 7778 2345 128 28 8 chr2 210106733 210107091 -43149492 + MLT1A1 LTR MaLR 1 365 0 886 219 22 40 chr2 210107091 210107150 -43149433 - L1MC4 LINE L1 -264 7778 7719 2172 91 3 3 chr2 210107202 210107500 -43149083 + AluSq SINE Alu 2 299 -14 555 259 106 21 chr2 210107651 210107840 -43148743 - MIR SINE MIR -57 205 1 987 180 0 0 chr2 210107863 210108030 -43148553 - AluJb SINE Alu -13 299 133 340 293 80 47 chr2 210108126 210108276 -43148307 + L2 LINE L2 3159 3313 0 1286 159 0 18 chr2 210108407 210108627 -43147956 - AluJb SINE Alu -15 297 82 1969 114 0 4 chr2 210109352 210109633 -43146950 - AluSq SINE Alu -14 299 20 22 56 0 0 chr2 210109710 210109746 -43146837 + AT_rich Low_complexity Low_complexity 1 36 0 296 200 267 11 chr2 210109812 210109836 -43146747 + L2 LINE L2 3201 3218 -95 1778 145 54 0 chr2 210109836 210110132 -43146451 - AluSx SINE Alu 0 312 1 296 200 267 11 chr2 210110132 210110197 -43146386 + L2 LINE L2 3218 3313 0 22 0 0 0 chr2 210110225 210110247 -43146336 + AT_rich Low_complexity Low_complexity 1 22 0 1088 189 0 9 chr2 210110257 210110469 -43146114 + AluJo SINE Alu 94 303 -9 2203 98 0 13 chr2 210110470 210110787 -43145796 + AluSq SINE Alu 1 313 0 282 250 66 0 chr2 210110872 210110948 -43145635 + L2 LINE L2 3199 3279 -34 891 213 70 53 chr2 210110953 210110992 -43145591 - MIR SINE MIR -13 249 212 1598 161 7 21 chr2 210110992 210111278 -43145305 - AluJo SINE Alu -30 282 1 891 213 70 53 chr2 210111278 210111482 -43145101 - MIR SINE MIR -50 212 2 2554 132 53 14 chr2 210111593 210112009 -43144574 - MSTB1 LTR MaLR 0 432 1 1767 49 0 22 chr2 210112063 210112123 -43144460 + AluSc SINE Alu 76 136 -173 2394 72 0 3 chr2 210112123 210112427 -43144156 + AluSg SINE Alu 1 303 -7 1767 49 0 22 chr2 210112427 210112589 -43143994 + AluSc SINE Alu 136 293 -16 1569 208 0 0 chr2 210112623 210112911 -43143672 - AluJb SINE Alu -24 288 1 275 286 29 29 chr2 210113052 210113157 -43143426 + MIR SINE MIR 48 152 -56 851 219 11 11 chr2 210113185 210113363 -43143220 - MER5B DNA MER1_type 0 178 1 1051 281 43 66 chr2 210113434 210113619 -43142964 + MER115 DNA AcHobo 1 189 -504 2019 146 0 0 chr2 210113619 210113921 -43142662 + AluSx SINE Alu 1 302 -10 1051 281 43 66 chr2 210113921 210114130 -43142453 + MER115 DNA AcHobo 189 386 -307 275 317 21 42 chr2 210114181 210114323 -43142260 - LTR16C LTR ERVL -308 183 45 1175 126 32 184 chr2 210114538 210114666 -43141917 + AluJb SINE Alu 9 155 -157 306 0 0 0 chr2 210114666 210114700 -43141883 + (TA)n Simple_repeat Simple_repeat 2 35 0 2269 97 0 3 chr2 210114701 210115011 -43141572 - AluSg1 SINE Alu 0 309 1 1175 126 32 184 chr2 210115011 210115222 -43141361 + AluJb SINE Alu 154 298 -14 759 244 87 38 chr2 210115224 210115511 -43141072 + HAL1 LINE L1 1961 2261 -246 1160 204 180 53 chr2 210115543 210115921 -43140662 - L1M4b LINE L1 -6412 447 22 237 192 19 0 chr2 210115935 210115987 -43140596 + L1MC4 LINE L1 7987 8039 -3 1830 116 6 38 chr2 210116046 210116364 -43140219 + AluJb SINE Alu 5 312 0 2260 79 13 0 chr2 210116436 210116741 -43139842 + AluSg SINE Alu 2 310 0 217 185 0 37 chr2 210117228 210117282 -43139301 + (CCCCG)n Simple_repeat Simple_repeat 5 56 0 2292 86 3 0 chr2 210118403 210118707 -43137876 - AluSp SINE Alu -8 305 1 313 311 59 8 chr2 210119863 210119982 -43136601 - L2 LINE L2 -8 3305 3181 186 43 0 0 chr2 210120100 210120123 -43136460 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1126 162 27 5 chr2 210120666 210120888 -43135695 - AluJo SINE Alu -1 311 85 445 111 0 0 chr2 210120888 210120951 -43135632 - AluSg/x SINE Alu -62 250 188 250 165 94 47 chr2 210122163 210122248 -43134335 + L1ME4a LINE L1 6029 6117 -4 1242 155 73 121 chr2 210123947 210124328 -43132255 - MLT1A1 LTR MaLR -2 363 1 234 0 0 0 chr2 210124975 210125001 -43131582 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 1972 120 0 3 chr2 210125003 210125287 -43131296 - AluSq SINE Alu -30 283 1 250 266 51 93 chr2 210125400 210125637 -43130946 - L2 LINE L2 -1213 2101 1875 1230 170 9 13 chr2 210125639 210125868 -43130715 + MER96B DNA MER1_type? 1 228 -189 193 305 57 72 chr2 210125886 210126165 -43130418 - L2 LINE L2 -1443 1871 1597 323 176 0 0 chr2 210126543 210126594 -43129989 + MER81 DNA DNA 1 51 -63 4847 25 2 2 chr2 210126690 210127248 -43129335 - LTR6B LTR ERV1 0 558 1 798 187 0 0 chr2 210128027 210128150 -43128433 + FLAM_C SINE Alu 3 125 -18 225 221 73 44 chr2 210128188 210128256 -43128327 - L1MEd LINE L1 -5555 564 495 21 36 0 0 chr2 210128800 210128828 -43127755 + AT_rich Low_complexity Low_complexity 1 28 0 2276 98 0 13 chr2 210131002 210131318 -43125265 - AluSx SINE Alu 0 312 1 2010 138 3 0 chr2 210131891 210132188 -43124395 - AluSx SINE Alu -14 298 1 520 141 24 0 chr2 210132331 210132456 -43124127 - FRAM SINE Alu 0 188 62 443 288 39 39 chr2 210132456 210132609 -43123974 + MIR SINE MIR 60 212 -50 201 74 0 0 chr2 210132642 210132669 -43123914 + (TTA)n Simple_repeat Simple_repeat 2 28 0 225 0 0 0 chr2 210133083 210133108 -43123475 + (TA)n Simple_repeat Simple_repeat 2 26 0 226 200 200 0 chr2 210133258 210133303 -43123280 + MER5A DNA MER1_type 10 63 -126 2295 76 7 3 chr2 210134301 210134605 -43121978 + AluY SINE Alu 1 305 -6 2121 103 7 3 chr2 210134679 210134971 -43121612 + AluSx SINE Alu 1 293 -19 2047 114 0 0 chr2 210135009 210135356 -43121227 + AluSx SINE Alu 5 351 0 22 70 0 0 chr2 210135626 210135669 -43120914 + AT_rich Low_complexity Low_complexity 1 43 0 1670 151 17 7 chr2 210136288 210136579 -43120004 - AluJo SINE Alu -18 294 1 7225 87 4 1 chr2 210139654 210140620 -43115963 + LTR5 LTR ERVK 1 969 0 22 70 0 0 chr2 210140784 210140827 -43115756 + GC_rich Low_complexity Low_complexity 1 43 0 621 155 106 88 chr2 210141249 210141475 -43115108 - L1ME4a LINE L1 -17 6104 5875 2046 104 7 3 chr2 210141603 210141891 -43114692 + AluSq SINE Alu 3 291 -22 278 336 85 27 chr2 210141987 210142246 -43114337 - L1MC4a LINE L1 -1850 5958 5685 392 100 17 17 chr2 210142557 210142617 -43113966 + U7 snRNA snRNA 2 61 -2 1882 145 7 3 chr2 210142646 210142942 -43113641 + AluJb SINE Alu 1 297 -15 22 0 0 0 chr2 210142942 210142964 -43113619 + AT_rich Low_complexity Low_complexity 1 22 0 341 281 93 14 chr2 210143055 210143194 -43113389 - MIR3 SINE MIR -17 191 42 2273 85 3 0 chr2 210143256 210143551 -43113032 - AluSp SINE Alu -17 296 1 2053 107 34 0 chr2 210143852 210144143 -43112440 + AluSp SINE Alu 1 301 -12 1970 106 42 0 chr2 210144334 210144617 -43111966 + AluSg SINE Alu 1 295 -15 904 212 79 12 chr2 210145098 210145339 -43111244 - MIR SINE MIR -3 259 3 2028 123 0 22 chr2 210145488 210145805 -43110778 - AluSq SINE Alu -3 310 1 1858 148 3 17 chr2 210146624 210146787 -43109796 - AluSx SINE Alu -17 295 136 2135 125 0 0 chr2 210146787 210147099 -43109484 - AluSx SINE Alu 0 312 1 1858 148 3 17 chr2 210147099 210147233 -43109350 - AluSx SINE Alu -176 136 2 1992 119 0 0 chr2 210147899 210148177 -43108406 + AluSx SINE Alu 1 278 -34 2186 99 0 0 chr2 210148240 210148534 -43108049 + AluSg SINE Alu 1 294 -16 354 244 66 89 chr2 210148740 210148953 -43107630 - L1ME4a LINE L1 -58 6063 5856 478 128 0 23 chr2 210148953 210149039 -43107544 - AluS SINE Alu -3 309 226 23 33 0 0 chr2 210150178 210150208 -43106375 + AT_rich Low_complexity Low_complexity 1 30 0 1371 156 137 4 chr2 210150614 210150709 -43105874 + AluJb SINE Alu 3 84 -218 2201 96 0 0 chr2 210150709 210151000 -43105583 + AluSg SINE Alu 4 294 -16 1371 156 137 4 chr2 210151000 210151167 -43105416 + AluJb SINE Alu 84 300 -2 1077 253 49 23 chr2 210151181 210151539 -43105044 - MLT1J2 LTR MaLR -61 385 1 291 260 13 0 chr2 210152545 210152622 -43103961 + MIR SINE MIR 34 111 -151 2144 89 0 40 chr2 210152622 210152948 -43103635 - AluSq SINE Alu 0 313 1 35 0 0 0 chr2 210152950 210152985 -43103598 + AT_rich Low_complexity Low_complexity 1 35 0 581 275 31 0 chr2 210152997 210153157 -43103426 + MIR SINE MIR 98 262 0 397 252 47 9 chr2 210154389 210154496 -43102087 - MIR SINE MIR -13 249 139 1290 96 11 0 chr2 210154548 210154726 -43101857 - AluSc SINE Alu 0 309 130 2023 118 9 16 chr2 210154726 210155041 -43101542 - AluSq SINE Alu 0 313 1 301 256 190 8 chr2 210155041 210155162 -43101421 - MIR SINE MIR -111 151 9 438 263 53 9 chr2 210155165 210155279 -43101304 + L2 LINE L2 3195 3313 0 281 286 0 0 chr2 210155442 210155505 -43101078 - L2 LINE L2 -1 3312 3250 2199 77 7 10 chr2 210155919 210156216 -43100367 - AluSx SINE Alu -16 296 1 1542 216 0 3 chr2 210156267 210156577 -43100006 - AluJb SINE Alu -3 309 1 694 177 16 16 chr2 210156580 210156704 -43099879 - AluJo/FLAM SINE Alu -181 131 8 664 250 18 6 chr2 210156846 210157010 -43099573 - MER103 DNA DNA 0 166 1 1762 145 28 0 chr2 210157811 210158093 -43098490 - AluJb SINE Alu -22 290 1 1283 127 14 14 chr2 210158116 210158328 -43098255 - AluJo SINE Alu -100 212 1 199 258 140 0 chr2 210158328 210158398 -43098185 - MIR SINE MIR -63 145 83 185 286 16 32 chr2 210158827 210158890 -43097693 - MIR3 SINE MIR -135 73 12 247 277 60 0 chr2 210159386 210159469 -43097114 - L1ME LINE L1 -502 5619 5532 330 26 0 0 chr2 210159502 210159541 -43097042 + (TTA)n Simple_repeat Simple_repeat 2 40 0 2204 80 0 0 chr2 210159545 210159821 -43096762 - AluSx SINE Alu -27 285 10 2216 93 7 0 chr2 210159969 210160260 -43096323 - AluSx SINE Alu -19 293 1 1463 189 45 76 chr2 210160359 210160739 -43095844 - MLT1F LTR MaLR 0 542 175 1156 191 5 0 chr2 210161827 210162042 -43094541 + AluJo SINE Alu 86 301 -11 2246 103 0 3 chr2 210162055 210162367 -43094216 - AluSx SINE Alu -1 311 1 2245 105 0 3 chr2 210162386 210162700 -43093883 - AluSq SINE Alu 0 313 1 1827 122 59 3 chr2 210162753 210163040 -43093543 - AluSx SINE Alu -9 303 1 27 0 0 0 chr2 210163086 210163113 -43093470 + AT_rich Low_complexity Low_complexity 1 27 0 713 320 81 17 chr2 210163419 210163897 -43092686 - L1ME4a LINE L1 -225 5896 5373 1520 177 3 45 chr2 210164636 210164946 -43091637 + AluSx SINE Alu 1 297 -15 3160 96 36 2 chr2 210164968 210165406 -43091177 - MLT2A2 LTR ERVL 0 453 1 1450 202 47 24 chr2 210165406 210165747 -43090836 - MLT1A1 LTR MaLR -7 358 10 2061 95 3 3 chr2 210165894 210166224 -43090359 - AluSq SINE Alu 0 330 1 6639 77 13 13 chr2 210166240 210167637 -43088946 - SVA Other Other -915 1379 23 23 0 0 0 chr2 210167638 210167661 -43088922 + AT_rich Low_complexity Low_complexity 1 23 0 24 32 0 0 chr2 210167702 210167733 -43088850 + AT_rich Low_complexity Low_complexity 1 31 0 1714 166 0 7 chr2 210167884 210168179 -43088404 + AluJo SINE Alu 11 303 -9 319 291 17 93 chr2 210168374 210168546 -43088037 + MLT1J LTR MaLR 281 439 -72 2108 89 3 0 chr2 210168614 210168926 -43087657 + AluY SINE Alu 1 313 0 10493 97 16 2 chr2 210168937 210170919 -43085664 + L1P4 LINE L1 3799 5809 -359 484 316 89 48 chr2 210171208 210171544 -43085039 - L1ME4a LINE L1 -4 6117 5768 2357 100 30 0 chr2 210171618 210171957 -43084626 + L1PB1 LINE L1 5798 6146 -5 2373 102 18 0 chr2 210171974 210172309 -43084274 + L1PA10 LINE L1 5814 6154 -14 3405 166 42 3 chr2 210173061 210173680 -43082903 - L1MB7 LINE L1 -16 6168 5526 1976 114 0 41 chr2 210173680 210173861 -43082722 - AluSx SINE Alu -8 304 140 2370 60 0 0 chr2 210173861 210174159 -43082424 - AluY SINE Alu -13 298 1 1976 114 0 41 chr2 210174159 210174294 -43082289 - AluSx SINE Alu -172 140 1 2402 210 66 45 chr2 210174294 210174325 -43082258 - L1MB7 LINE L1 -808 5338 5309 2207 104 0 0 chr2 210174325 210174622 -43081961 - AluSx SINE Alu -13 299 3 2402 210 66 45 chr2 210174622 210175202 -43081381 - L1MB7 LINE L1 -837 5309 4706 774 151 56 0 chr2 210175202 210175328 -43081255 - FLAM_C SINE Alu 0 133 1 2402 210 66 45 chr2 210175328 210175457 -43081126 - L1MB7 LINE L1 -1440 4706 4581 2285 189 52 8 chr2 210175503 210175958 -43080625 + MER41B LTR ERV1 100 459 -19 1876 149 0 0 chr2 210175994 210176290 -43080293 + AluJb SINE Alu 1 296 -16 1628 135 31 85 chr2 210176320 210176474 -43080109 - MER50 LTR ERV1 0 734 604 1616 118 0 13 chr2 210176474 210176712 -43079871 + AluSx SINE Alu 1 235 -77 1628 135 31 85 chr2 210176712 210176876 -43079707 - MER50 LTR ERV1 -130 604 433 1108 153 25 68 chr2 210176873 210177109 -43079474 - MER50 LTR ERV1 -508 226 1 * 1671 168 0 10 chr2 210177334 210177626 -43078957 + AluJo SINE Alu 1 289 -23 37 76 0 0 chr2 210177663 210177742 -43078841 + AT_rich Low_complexity Low_complexity 1 79 0 196 133 33 0 chr2 210177742 210177802 -43078781 + (TA)n Simple_repeat Simple_repeat 2 63 0 2204 86 33 7 chr2 210177818 210178122 -43078461 - AluSq SINE Alu -1 312 1 713 172 0 16 chr2 210178290 210178418 -43078165 - FLAM_A SINE Alu -6 127 2 5668 106 242 17 chr2 210178583 210178808 -43077775 + MER52C LTR ERV1 2 175 -1103 3390 118 12 6 chr2 210178808 210179316 -43077267 - MER9 LTR ERVK 0 511 1 5668 106 242 17 chr2 210179316 210180133 -43076450 + MER52C LTR ERV1 175 1278 0 2130 97 7 0 chr2 210180328 210180618 -43075965 - AluSp SINE Alu -21 292 1 403 316 25 25 chr2 210181178 210181374 -43075209 + MIR SINE MIR 7 202 -60 25 0 0 0 chr2 210181561 210181586 -43074997 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr2 210181647 210181668 -43074915 + AT_rich Low_complexity Low_complexity 1 21 0 2061 107 13 0 chr2 210181901 210182199 -43074384 - AluSx SINE Alu -10 302 1 1841 121 48 3 chr2 210182209 210182498 -43074085 - AluSg SINE Alu -8 302 1 759 248 78 21 chr2 210182670 210182912 -43073671 + MIR SINE MIR 7 262 0 192 179 0 0 chr2 210183060 210183099 -43073484 + T-rich Low_complexity Low_complexity 1 39 0 1789 89 0 8 chr2 210183166 210183412 -43073171 + AluSg SINE Alu 1 244 -66 1409 161 0 42 chr2 210184509 210184817 -43071766 - AluSx SINE Alu 0 329 33 1963 147 0 0 chr2 210184965 210185272 -43071311 - AluJb SINE Alu -1 311 5 474 91 0 0 chr2 210185491 210185557 -43071026 - MER41A LTR ERV1 -89 465 400 1191 174 0 22 chr2 210185638 210185868 -43070715 - AluJb SINE Alu -6 306 82 2098 111 0 3 chr2 210187342 210187640 -43068943 - AluSx SINE Alu -15 297 1 236 253 147 63 chr2 210188105 210188295 -43068288 + MIR SINE MIR 7 212 -50 526 351 40 24 chr2 210188553 210188801 -43067782 + MIR SINE MIR 1 252 -10 2295 117 0 0 chr2 210188824 210189132 -43067451 - AluSx SINE Alu -4 308 1 2235 202 84 86 chr2 210189145 210189525 -43067058 - L1MC5 LINE L1 -438 7523 7144 2269 117 0 3 chr2 210189525 210189824 -43066759 - AluSq SINE Alu -15 298 1 2235 202 84 86 chr2 210189824 210189906 -43066677 - L1MC5 LINE L1 -817 7144 7063 1972 147 13 13 chr2 210189906 210190218 -43066365 - AluSx SINE Alu 0 312 1 2235 202 84 86 chr2 210190218 210190368 -43066215 - L1MC5 LINE L1 -898 7063 6914 1957 144 0 7 chr2 210190368 210190659 -43065924 + AluJb SINE Alu 1 289 -23 2235 202 84 86 chr2 210190659 210190976 -43065607 - L1MC5 LINE L1 -1047 6914 6664 246 32 0 0 chr2 210191502 210191533 -43065050 + (TTA)n Simple_repeat Simple_repeat 1 31 0 2246 96 0 0 chr2 210191533 210191814 -43064769 - AluSq SINE Alu -32 281 1 2015 113 14 7 chr2 210192765 210193078 -43063505 + AluSx SINE Alu 1 315 0 675 213 84 7 chr2 210193228 210193383 -43063200 + MIR SINE MIR 13 179 -83 189 325 12 25 chr2 210193480 210193560 -43063023 + L2 LINE L2 3139 3217 -55 216 0 0 0 chr2 210193851 210193875 -43062708 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 2152 103 0 0 chr2 210193888 210194160 -43062423 - AluSx SINE Alu -40 272 1 575 242 32 0 chr2 210194222 210194346 -43062237 - L2 LINE L2 -1 3312 3185 739 219 149 9 chr2 210194438 210194666 -43061917 + MIR SINE MIR 2 261 -1 315 0 0 0 chr2 210194740 210194775 -43061808 + (TG)n Simple_repeat Simple_repeat 2 36 0 2365 95 3 0 chr2 210195424 210195729 -43060854 - AluY SINE Alu -5 306 1 2007 117 69 0 chr2 210195734 210196024 -43060559 - AluSx SINE Alu -2 310 1 823 105 0 0 chr2 210196330 210196444 -43060139 - AluSc SINE Alu -11 298 185 291 162 84 214 chr2 210196608 210196762 -43059821 + MER63 DNA MER1_type 1 760 -76 349 220 68 114 chr2 210196921 210197053 -43059530 + MER45A DNA AcHobo 2 127 -51 2613 137 5 5 chr2 210197311 210197712 -43058871 - L1MB3 LINE L1 -2 6181 5781 271 156 53 10 chr2 210197712 210197782 -43058801 - MER6 DNA MER2_type -1 864 795 875 152 0 28 chr2 210197784 210197929 -43058654 - FLAM_C SINE Alu -2 141 1 394 137 29 116 chr2 210197935 210197985 -43058598 - MER6 DNA MER2_type -62 803 750 2124 137 0 0 chr2 210197985 210198285 -43058298 + AluSx SINE Alu 1 300 -12 394 137 29 116 chr2 210198285 210198382 -43058201 - MER6 DNA MER2_type -115 750 -65 2456 176 25 13 chr2 210198382 210198858 -43057725 - L1MB3 LINE L1 -388 5783 5302 2386 99 0 10 chr2 210198863 210199177 -43057406 - AluSx SINE Alu -1 311 1 2575 55 0 6 chr2 210199181 210199492 -43057091 - AluY SINE Alu -2 309 1 433 206 20 82 chr2 210199564 210199710 -43056873 - L1MC4 LINE L1 0 8042 7906 * 1025 261 3 17 chr2 210199703 210200002 -43056581 - L1MC4 LINE L1 -95 7947 7653 883 135 15 0 chr2 210200021 210200154 -43056429 + FLAM_C SINE Alu 1 135 -8 195 42 0 0 chr2 210200159 210200183 -43056400 + (CAATA)n Simple_repeat Simple_repeat 2 25 0 1651 236 13 97 chr2 210200183 210200222 -43056361 - L1MC4 LINE L1 -395 7647 7606 2182 132 3 0 chr2 210200222 210200525 -43056058 - AluSx SINE Alu -7 305 2 1651 236 13 97 chr2 210200525 210201092 -43055491 - L1MC4 LINE L1 -436 7606 7092 1707 125 111 11 chr2 210201703 210201982 -43054601 - AluSx SINE Alu -5 307 1 183 263 0 53 chr2 210201985 210202042 -43054541 + MIR3 SINE MIR 155 208 0 198 0 0 0 chr2 210202126 210202148 -43054435 + (CA)n Simple_repeat Simple_repeat 2 23 0 203 279 0 0 chr2 210202333 210202376 -43054207 - L3 LINE CR1 -7 1570 1528 21 0 0 0 chr2 210202454 210202475 -43054108 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 210202545 210202568 -43054015 + AT_rich Low_complexity Low_complexity 1 23 0 1772 98 4 4 chr2 210202568 210202803 -43053780 - AluSx SINE Alu -77 235 1 204 40 0 0 chr2 210202963 210202988 -43053595 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 21 36 0 0 chr2 210203504 210203532 -43053051 + AT_rich Low_complexity Low_complexity 1 28 0 648 266 205 15 chr2 210203556 210203898 -43052685 - L1MC4a LINE L1 -1752 6056 5650 2428 89 0 0 chr2 210203957 210204259 -43052324 - AluSx SINE Alu -10 302 1 655 270 43 43 chr2 210205124 210205354 -43051229 - MIR SINE MIR -15 247 18 2044 142 0 19 chr2 210205866 210206183 -43050400 - AluJb SINE Alu -1 311 1 24 0 0 0 chr2 210206649 210206673 -43049910 + AT_rich Low_complexity Low_complexity 1 24 0 23 33 0 0 chr2 210207092 210207122 -43049461 + AT_rich Low_complexity Low_complexity 1 30 0 398 199 6 19 chr2 210207139 210207295 -43049288 + (TA)n Simple_repeat Simple_repeat 1 154 0 504 191 0 12 chr2 210207295 210207379 -43049204 - FLAM_A SINE Alu -25 117 35 1663 120 94 23 chr2 210207991 210208129 -43048454 + AluSq SINE Alu 1 128 -202 2399 75 0 3 chr2 210208129 210208424 -43048159 + AluSc SINE Alu 1 294 -15 1663 120 94 23 chr2 210208424 210208596 -43047987 + AluSq SINE Alu 128 330 0 287 243 73 118 chr2 210209031 210209214 -43047369 + MIR3 SINE MIR 13 180 -67 2118 125 3 0 chr2 210209335 210209630 -43046953 - AluSx SINE Alu -16 296 1 237 312 0 0 chr2 210209639 210209716 -43046867 + T-rich Low_complexity Low_complexity 1 77 0 25 31 0 0 chr2 210210243 210210275 -43046308 + AT_rich Low_complexity Low_complexity 1 32 0 483 155 0 0 chr2 210210361 210210445 -43046138 + (TCCA)n Simple_repeat Simple_repeat 2 85 0 302 331 150 59 chr2 210210445 210210765 -43045818 - L2 LINE L2 0 3272 2924 281 288 112 48 chr2 210210948 210211073 -43045510 + L2 LINE L2 3138 3270 -2 376 225 13 106 chr2 210211349 210211500 -43045083 - L2 LINE L2 -16 3297 3161 26 0 0 0 chr2 210211500 210211526 -43045057 + AT_rich Low_complexity Low_complexity 1 26 0 4743 144 31 52 chr2 210211603 210211809 -43044774 - L1MA6 LINE L1 -2 6298 6089 679 244 0 0 chr2 210211809 210211928 -43044655 - FLAM_A SINE Alu -14 119 1 4743 144 31 52 chr2 210211928 210212596 -43043987 - L1MA6 LINE L1 -211 6089 5441 2237 115 13 0 chr2 210212596 210212901 -43043682 - AluSx SINE Alu -3 309 1 4743 144 31 52 chr2 210212901 210212949 -43043634 - L1MA6 LINE L1 -859 5441 5394 5207 155 6 22 chr2 210215663 210216453 -43040130 - L1MA6 LINE L1 -755 5391 4616 824 172 0 0 chr2 210216453 210216598 -43039985 - FLAM_A SINE Alu 0 145 1 5207 155 6 22 chr2 210216598 210216762 -43039821 - L1MA6 LINE L1 -1530 4616 4451 252 115 62 52 chr2 210216767 210216863 -43039720 + (TTTAA)n Simple_repeat Simple_repeat 5 101 0 1055 184 0 0 chr2 210216867 210217030 -43039553 + FRAM SINE Alu 1 155 -21 195 312 88 16 chr2 210217086 210217211 -43039372 - L2 LINE L2 -268 3045 2912 580 320 41 15 chr2 210217301 210217498 -43039085 - MIR SINE MIR -38 224 23 233 337 20 10 chr2 210217538 210217636 -43038947 + L2 LINE L2 2989 3087 -185 2002 100 50 14 chr2 210217936 210218217 -43038366 + AluSx SINE Alu 1 291 -21 1695 167 10 27 chr2 210218573 210218873 -43037710 - AluJb SINE Alu -17 295 1 1827 163 14 3 chr2 210218966 210219254 -43037329 - AluJb SINE Alu -21 291 1 1949 161 0 0 chr2 210219640 210219931 -43036652 + AluSx SINE Alu 1 291 -21 508 154 46 85 chr2 210219952 210220082 -43036501 - MLT1K LTR MaLR -17 571 447 267 327 27 0 chr2 210220424 210220534 -43036049 - MIR3 SINE MIR -8 200 88 4158 119 16 12 chr2 210220815 210221393 -43035190 + LTR19B LTR ERV1 1 580 0 2888 78 128 2 chr2 210221956 210222354 -43034229 + LTR7 LTR ERV1 1 448 -2 1868 137 7 0 chr2 210222861 210223131 -43033452 - AluSx SINE Alu -2 310 39 237 303 69 41 chr2 210224147 210224292 -43032291 - L3 LINE CR1 -149 1428 1280 805 189 0 21 chr2 210224455 210224598 -43031985 - AluJb SINE Alu -17 295 156 2514 73 0 0 chr2 210224622 210224923 -43031660 - AluY SINE Alu -10 301 1 27 87 0 0 chr2 210225065 210225134 -43031449 + AT_rich Low_complexity Low_complexity 1 69 0 335 202 64 11 chr2 210225466 210225560 -43031023 - L1ME4a LINE L1 -2 6119 6021 1070 294 79 38 chr2 210225598 210226155 -43030428 + L2 LINE L2 726 1305 -2009 2062 117 20 3 chr2 210226341 210226639 -43029944 + AluSx SINE Alu 1 303 -9 829 311 30 11 chr2 210226774 210227140 -43029443 + L1ME LINE L1 5296 5668 -494 841 163 0 0 chr2 210227142 210227265 -43029318 - FLAM_C SINE Alu -20 123 1 328 202 30 135 chr2 210227321 210227462 -43029121 + L1ME LINE L1 5702 5829 -333 456 187 0 0 chr2 210227468 210227543 -43029040 - MER116 DNA Mariner 0 80 6 23 68 0 0 chr2 210227572 210227616 -43028967 + AT_rich Low_complexity Low_complexity 1 44 0 2387 76 0 10 chr2 210228207 210228511 -43028072 - AluY SINE Alu -10 301 1 1883 147 3 20 chr2 210228710 210229002 -43027581 + AluSx SINE Alu 5 291 -21 260 211 0 19 chr2 210229239 210229291 -43027292 - MIR SINE MIR -116 146 96 321 276 167 21 chr2 210230131 210230221 -43026362 - L1MC4a LINE L1 -1851 5957 5881 2273 49 4 0 chr2 210230221 210230485 -43026098 + AluSp SINE Alu 1 265 -48 321 276 167 21 chr2 210230485 210230586 -43025997 - L1MC4a LINE L1 -1927 5881 5738 2513 158 57 0 chr2 210230637 210231042 -43025541 + MSTA LTR MaLR 1 428 0 771 265 82 81 chr2 210231357 210231406 -43025177 + L1ME LINE L1 4853 4900 -1221 2372 82 0 0 chr2 210231406 210231700 -43024883 - AluY SINE Alu -16 295 2 771 265 82 81 chr2 210231700 210232012 -43024571 + L1ME LINE L1 4900 5210 -911 738 151 65 0 chr2 210232012 210232151 -43024432 + L1MB3 LINE L1 6036 6183 0 771 265 82 81 chr2 210232151 210232725 -43023858 + L1ME LINE L1 5210 5777 -344 366 169 51 22 chr2 210232757 210232876 -43023707 - LTR50 LTR ERVL 0 789 659 449 237 172 47 chr2 210232972 210233204 -43023379 - LTR41 LTR ERVL -534 261 1 746 223 60 11 chr2 210233299 210233483 -43023100 - MIR SINE MIR -13 249 57 923 125 59 0 chr2 210233621 210233757 -43022826 + MSTA LTR MaLR 285 428 0 25 0 0 0 chr2 210233892 210233917 -43022666 + AT_rich Low_complexity Low_complexity 1 25 0 379 319 138 24 chr2 210234246 210234456 -43022127 - MIR SINE MIR -6 256 23 232 241 27 54 chr2 210234987 210235099 -43021484 - MER113 DNA MER1_type? 0 521 413 2083 115 0 29 chr2 210235099 210235411 -43021172 - AluSx SINE Alu -9 303 1 23 33 0 0 chr2 210235440 210235470 -43021113 + AT_rich Low_complexity Low_complexity 1 30 0 343 250 57 40 chr2 210235525 210235649 -43020934 - MIR SINE MIR -13 249 124 375 245 98 20 chr2 210235654 210235858 -43020725 - L1MEc LINE L1 -3447 3197 2978 557 310 28 44 chr2 210235892 210236253 -43020330 - L1MEc LINE L1 -3987 2838 2484 437 149 46 0 chr2 210236279 210236366 -43020217 - L1MA10 LINE L1 0 6334 6244 2312 128 33 3 chr2 210236406 210236741 -43019842 + MER7A DNA MER2_type 4 346 0 279 304 0 0 chr2 210236752 210236821 -43019762 - L1MA10 LINE L1 -97 6237 6169 795 204 31 0 chr2 210236860 210237056 -43019527 - L1MEc LINE L1 -3123 3521 3320 935 150 0 0 chr2 210337175 210337308 -42919275 - AluSq/x SINE Alu -180 133 1 1893 166 3 13 chr2 210337309 210337623 -42918960 - AluJb SINE Alu -1 311 1 2167 74 0 32 chr2 210337630 210337790 -42918793 - AluSx SINE Alu -15 297 148 2383 62 0 23 chr2 210337790 210338097 -42918486 - AluY SINE Alu -11 300 1 2167 74 0 32 chr2 210338097 210338220 -42918363 - AluSx SINE Alu -164 148 23 1743 175 0 16 chr2 210338231 210338534 -42918049 - AluJb SINE Alu -14 298 1 1982 117 0 74 chr2 210338589 210338915 -42917668 - AluSx SINE Alu -8 304 3 1804 162 3 23 chr2 210338917 210339226 -42917357 - AluJb SINE Alu -8 304 2 358 209 9 113 chr2 210339230 210339345 -42917238 + L2 LINE L2 3210 3312 -1 1133 93 0 0 chr2 210339444 210339584 -42916999 + AluSq/x SINE Alu 1 140 -172 478 81 0 0 chr2 210339685 210339747 -42916836 - Alu SINE Alu -248 62 1 390 320 26 26 chr2 210339759 210339915 -42916668 - L1MEc LINE L1 -4613 2212 2057 1513 188 38 54 chr2 210339917 210340067 -42916516 - L1MB8 LINE L1 0 6178 6027 2071 110 16 19 chr2 210340067 210340376 -42916207 + AluSq SINE Alu 1 308 -5 2298 101 10 13 chr2 210340376 210340681 -42915902 + AluSg SINE Alu 1 305 -5 1513 188 38 54 chr2 210340681 210340972 -42915611 - L1MB8 LINE L1 -150 6028 5742 2246 107 10 7 chr2 210340972 210341282 -42915301 - AluSx SINE Alu -1 311 1 1513 188 38 54 chr2 210341282 210341316 -42915267 - L1MB8 LINE L1 -436 5742 5709 716 250 22 5 chr2 210341297 210341521 -42915062 - L1MEc LINE L1 -4842 1700 1473 * 1499 87 15 10 chr2 210341521 210341717 -42914866 - AluSg/x SINE Alu 0 310 114 1275 128 6 0 chr2 210341817 210341996 -42914587 + AluSg/x SINE Alu 123 302 -8 1992 91 3 74 chr2 210342012 210342321 -42914262 + AluSq SINE Alu 16 302 -11 703 260 42 57 chr2 210342326 210342444 -42914139 - MIR SINE MIR 0 262 144 1671 86 52 56 chr2 210342444 210342713 -42913870 - AluSq SINE Alu -45 268 1 703 260 42 57 chr2 210342713 210342859 -42913724 - MIR SINE MIR -118 144 2 364 367 67 26 chr2 210342945 210343348 -42913235 + L2 LINE L2 2457 2896 -376 761 202 0 0 chr2 210343348 210343477 -42913106 + FLAM_A SINE Alu 4 132 -1 364 367 67 26 chr2 210343477 210343675 -42912908 + L2 LINE L2 2896 3084 -188 833 273 43 23 chr2 210343880 210344136 -42912447 + MIR SINE MIR 2 262 0 180 129 32 0 chr2 210344276 210344307 -42912276 - MIR SINE MIR -112 150 119 1849 140 39 0 chr2 210346734 210347020 -42909563 + AluSx SINE Alu 1 297 -15 234 325 0 12 chr2 210347020 210347100 -42909483 - MIR SINE MIR -113 95 17 499 228 329 0 chr2 210347174 210347427 -42909156 + L2 LINE L2 2717 3036 -277 2286 89 0 13 chr2 210347435 210347748 -42908835 - AluSc SINE Alu 0 309 1 225 0 0 0 chr2 210347802 210347827 -42908756 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2102 103 0 4 chr2 210347831 210348112 -42908471 - AluSx SINE Alu -32 280 1 23 54 0 0 chr2 210348885 210348922 -42907661 + GC_rich Low_complexity Low_complexity 1 37 0 189 121 0 0 chr2 210349263 210349296 -42907287 + (TCTCTG)n Simple_repeat Simple_repeat 4 36 0 1947 108 3 17 chr2 210351286 210351604 -42904979 - AluSp SINE Alu 0 314 1 1460 133 4 9 chr2 210355194 210355427 -42901156 - AluJb SINE Alu -80 232 1 2140 96 3 10 chr2 210355671 210355974 -42900609 + AluSq SINE Alu 1 301 -12 388 263 68 45 chr2 210356627 210356760 -42899823 + MER91A DNA MER1_type 59 194 -2 200 314 171 9 chr2 210357145 210357250 -42899333 - L2 LINE L2 -94 3178 3057 361 370 48 10 chr2 210357269 210357558 -42899025 + L2 LINE L2 2480 2779 -535 760 219 32 122 chr2 210357567 210357721 -42898862 + MIR SINE MIR 4 124 -138 2253 89 0 3 chr2 210357721 210358013 -42898570 + AluSx SINE Alu 1 291 -21 760 219 32 122 chr2 210358013 210358136 -42898447 + MIR SINE MIR 124 256 -6 2290 76 6 10 chr2 210358195 210358509 -42898074 - AluSp SINE Alu 0 313 1 279 308 63 21 chr2 210358605 210358748 -42897835 + L2 LINE L2 3075 3223 -49 2127 71 0 29 chr2 210361344 210361653 -42894930 - AluSg SINE Alu -10 300 1 369 293 40 33 chr2 210363805 210363955 -42892628 + L2 LINE L2 3117 3267 -5 675 281 30 57 chr2 210363996 210364407 -42892176 - L1MEd LINE L1 -4862 1257 940 2108 55 48 35 chr2 210364449 210364738 -42891845 + AluY SINE Alu 1 293 -18 437 97 16 0 chr2 210364747 210364809 -42891774 - Alu SINE Alu -14 298 236 246 399 0 26 chr2 210367198 210367351 -42889232 + G-rich Low_complexity Low_complexity 3 151 0 * 313 345 23 18 chr2 210367279 210367450 -42889133 + (CTGGGG)n Simple_repeat Simple_repeat 1 172 0 317 310 6 29 chr2 210367566 210367737 -42888846 + (CTGGGG)n Simple_repeat Simple_repeat 1 167 0 1826 103 51 55 chr2 210369074 210369281 -42887302 - AluSx SINE Alu -1 311 104 2259 88 0 13 chr2 210369281 210369588 -42886995 - AluY SINE Alu -8 303 1 1826 103 51 55 chr2 210369588 210369692 -42886891 - AluSx SINE Alu -208 104 1 237 178 0 0 chr2 210371298 210371343 -42885240 + (CGG)n Simple_repeat Simple_repeat 3 47 0 1974 130 18 0 chr2 210372821 210373106 -42883477 + AluSx SINE Alu 1 290 -22 645 14 0 0 chr2 210373107 210373181 -42883402 + (GGAA)n Simple_repeat Simple_repeat 3 76 0 1719 121 88 0 chr2 210373185 210373483 -42883100 + AluSx SINE Alu 2 323 0 298 325 16 16 chr2 210374047 210374170 -42882413 + MIR SINE MIR 73 195 -67 2331 70 0 29 chr2 210374193 210374507 -42882076 - AluY SINE Alu -6 305 1 1942 84 13 55 chr2 210374507 210374816 -42881767 - AluY SINE Alu -15 296 1 971 155 25 6 chr2 210375105 210375266 -42881317 + AluJb SINE Alu 120 283 -29 1316 165 53 100 chr2 210375288 210375425 -42881158 + AluJo SINE Alu 3 145 -167 1913 128 0 14 chr2 210375425 210375721 -42880862 + AluSx SINE Alu 5 296 -16 1316 165 53 100 chr2 210375721 210375754 -42880829 + AluJo SINE Alu 145 178 -134 180 0 0 0 chr2 210375754 210375774 -42880809 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1316 165 53 100 chr2 210375774 210375923 -42880660 + AluJo SINE Alu 178 308 -4 224 208 21 0 chr2 210379560 210379608 -42876975 + G-rich Low_complexity Low_complexity 1 49 0 226 286 0 19 chr2 210380037 210380142 -42876441 + G-rich Low_complexity Low_complexity 3 105 0 223 298 0 29 chr2 210380972 210381077 -42875506 + GA-rich Low_complexity Low_complexity 1 101 0 211 285 15 46 chr2 210381127 210381257 -42875326 + (CAGAGA)n Simple_repeat Simple_repeat 5 130 0 215 268 70 14 chr2 210381537 210381608 -42874975 + L2 LINE L2 3210 3284 -29 239 54 27 0 chr2 210384959 210384996 -42871587 + (GAAA)n Simple_repeat Simple_repeat 3 40 0 378 291 138 77 chr2 210385090 210385567 -42871016 - L1M2 LINE L1 -1483 5365 1741 244 263 0 38 chr2 210385776 210385856 -42870727 + G-rich Low_complexity Low_complexity 1 77 0 26 0 0 0 chr2 210389601 210389627 -42866956 + GC_rich Low_complexity Low_complexity 1 26 0 211 317 0 55 chr2 210389874 210390057 -42866526 + GA-rich Low_complexity Low_complexity 2 174 0 311 268 6 61 chr2 210391828 210391992 -42864591 + CT-rich Low_complexity Low_complexity 2 156 0 198 103 0 0 chr2 210392102 210392131 -42864452 + (AGGGGG)n Simple_repeat Simple_repeat 4 32 0 21 57 0 0 chr2 210392444 210392479 -42864104 + GC_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr2 210393008 210393036 -42863547 + GC_rich Low_complexity Low_complexity 1 28 0 217 148 56 19 chr2 210393136 210393190 -42863393 + (CCCG)n Simple_repeat Simple_repeat 3 58 0 247 203 101 38 chr2 210395220 210395299 -42861284 + MER5A DNA MER1_type 88 171 -18 2024 111 0 10 chr2 210395302 210395622 -42860961 - AluSx SINE Alu 0 312 1 1918 126 0 11 chr2 210395624 210395909 -42860674 - AluSx SINE Alu -4 308 27 2024 102 0 14 chr2 210396290 210396585 -42859998 - AluSx SINE Alu -20 292 2 204 299 45 104 chr2 210396591 210396792 -42859791 - L2 LINE L2 -16 3297 3109 180 0 0 0 chr2 210397004 210397024 -42859559 + (CCG)n Simple_repeat Simple_repeat 3 22 0 180 0 0 0 chr2 210397092 210397112 -42859471 + (CCG)n Simple_repeat Simple_repeat 1 20 0 2392 45 0 13 chr2 210397862 210398171 -42858412 + AluY SINE Alu 1 305 -6 1934 110 7 29 chr2 210398300 210398608 -42857975 + AluSp SINE Alu 1 301 -12 1029 152 0 22 chr2 210398608 210398792 -42857791 + AluSp SINE Alu 134 313 0 658 280 83 80 chr2 210402693 210402913 -42853670 - L2 LINE L2 -13 3300 3082 1640 81 0 17 chr2 210402913 210403183 -42853400 - AluSx SINE Alu 0 319 54 658 280 83 80 chr2 210403183 210403199 -42853384 - L2 LINE L2 -231 3082 3068 674 113 14 92 chr2 210403199 210403340 -42853243 - FLAM_C SINE Alu 0 133 4 658 280 83 80 chr2 210403340 210403797 -42852786 - L2 LINE L2 -245 3068 2583 318 304 78 0 chr2 210403919 210404021 -42852562 + L1MC/D LINE L1 4959 5068 -1078 314 243 140 5 chr2 210404133 210404406 -42852177 + L1MC/D LINE L1 5137 5454 -768 387 308 0 76 chr2 210404416 210404509 -42852074 + L1MC/D LINE L1 5491 5567 -2241 2002 108 7 10 chr2 210404509 210404806 -42851777 - AluSq SINE Alu -17 296 1 387 308 0 76 chr2 210404806 210404884 -42851699 + L1MC/D LINE L1 5567 5649 -2159 838 308 124 30 chr2 210404907 210405508 -42851075 + L2 LINE L2 2370 2913 -400 1332 110 53 116 chr2 210405508 210405626 -42850957 - AluJo SINE Alu -13 299 175 1866 132 7 4 chr2 210405626 210405906 -42850677 + AluSg SINE Alu 17 297 -13 2289 70 3 3 chr2 210405906 210406204 -42850379 + AluY SINE Alu 1 298 -13 1332 110 53 116 chr2 210406204 210406403 -42850180 - AluJo SINE Alu -135 177 1 838 308 124 30 chr2 210406403 210406669 -42849914 + L2 LINE L2 2913 3313 0 245 339 17 0 chr2 210406703 210406818 -42849765 + L1MC/D LINE L1 5683 5799 -2009 1572 218 95 64 chr2 210406837 210407307 -42849276 + MER119 DNA MER1_type 8 499 -84 1849 139 3 14 chr2 210407307 210407601 -42848982 - AluSx SINE Alu -21 291 1 1572 218 95 64 chr2 210407601 210407689 -42848894 + MER119 DNA MER1_type 499 583 0 793 145 0 30 chr2 210407787 210407918 -42848665 + FLAM_C SINE Alu 9 135 -8 1372 186 0 0 chr2 210407920 210408156 -42848427 + AluSq SINE Alu 1 236 -77 1973 133 0 17 chr2 210408687 210408988 -42847595 - AluSx SINE Alu -16 296 1 1016 96 0 0 chr2 210408988 210409124 -42847459 - AluSq/x SINE Alu -177 136 1 614 285 124 12 chr2 210409221 210409470 -42847113 - L2 LINE L2 -4 3268 2992 1934 132 16 10 chr2 210409821 210410131 -42846452 + AluSx SINE Alu 1 312 0 551 311 99 43 chr2 210410727 210411049 -42845534 - L2 LINE L2 -8 3264 2925 40 0 0 0 chr2 210411228 210411268 -42845315 + AT_rich Low_complexity Low_complexity 1 40 0 424 79 48 16 chr2 210411473 210411536 -42845047 + Alu SINE Alu 226 290 -20 213 405 46 6 chr2 210411766 210411939 -42844644 - L2 LINE L2 -905 2409 2230 572 155 162 63 chr2 210411946 210412088 -42844495 - Tigger1 DNA MER2_type 0 2418 2263 2307 86 0 10 chr2 210412091 210412395 -42844188 - AluSx SINE Alu -11 301 1 2191 83 20 3 chr2 210412562 210412862 -42843721 + AluSc SINE Alu 1 305 -4 293 245 70 77 chr2 210414712 210414855 -42841728 + MIR SINE MIR 47 188 -74 2070 109 0 29 chr2 210416247 210416559 -42840024 - AluSx SINE Alu -3 309 7 2353 52 0 20 chr2 210417507 210417812 -42838771 + AluY SINE Alu 1 299 -12 1775 145 7 10 chr2 210417820 210418110 -42838473 + AluSq SINE Alu 1 289 -24 310 370 24 33 chr2 210421566 210421777 -42834806 - MIR SINE MIR 0 262 54 1579 101 42 49 chr2 210421859 210422147 -42834436 + AluSg SINE Alu 1 286 -24 26 0 0 0 chr2 210422285 210422311 -42834272 + AT_rich Low_complexity Low_complexity 1 26 0 3200 185 45 36 chr2 210422319 210422369 -42834214 + L1MB7 LINE L1 4456 4504 -1642 1885 114 14 14 chr2 210422369 210422666 -42833917 + AluSp SINE Alu 3 299 -14 3200 185 45 36 chr2 210422666 210423501 -42833082 + L1MB7 LINE L1 4504 5349 -797 2218 105 3 0 chr2 210423503 210423809 -42832774 + AluSp SINE Alu 1 307 -6 1011 52 0 22 chr2 210423811 210423945 -42832638 + AluY SINE Alu 1 131 -180 1903 188 74 84 chr2 210423959 210424430 -42832153 + L1MB7 LINE L1 5338 5812 -372 1532 146 48 41 chr2 210424430 210424724 -42831859 + AluSx SINE Alu 1 296 -6 1639 160 24 24 chr2 210424733 210425027 -42831556 + AluJb SINE Alu 1 294 -18 1903 188 74 84 chr2 210425027 210425056 -42831527 + L1MB7 LINE L1 5820 5848 -336 667 205 0 8 chr2 210425056 210425173 -42831410 + FLAM_C SINE Alu 2 117 -16 1903 188 74 84 chr2 210425173 210425253 -42831330 + L1MB7 LINE L1 5848 5923 -261 2023 95 3 24 chr2 210425371 210425666 -42830917 + AluSx SINE Alu 1 289 -23 2115 127 0 3 chr2 210426221 210426529 -42830054 + AluSq SINE Alu 3 309 -4 1411 69 11 11 chr2 210427422 210427611 -42828972 + AluSp SINE Alu 1 189 -124 2012 107 3 16 chr2 210428047 210428355 -42828228 + AluSp SINE Alu 1 304 -9 658 147 0 18 chr2 210428682 210428791 -42827792 + AluSg/x SINE Alu 190 296 -16 383 276 0 42 chr2 210430902 210431221 -42825362 + (CCCA)n Simple_repeat Simple_repeat 1 305 0 220 303 56 22 chr2 210432485 210432574 -42824009 - L2 LINE L2 -27 3286 3195 268 295 57 16 chr2 210432603 210432725 -42823858 - L1ME4a LINE L1 -28 6093 5967 1976 138 10 3 chr2 210432939 210433244 -42823339 - AluSx SINE Alu -5 307 1 359 174 20 61 chr2 210433246 210433344 -42823239 - L1MDa LINE L1 -4595 1945 1852 337 205 0 72 chr2 210433354 210433437 -42823146 - LTR9 LTR ERV1 -86 526 450 364 275 78 14 chr2 210433461 210433603 -42822980 - L1MDa LINE L1 -4707 1833 1683 2195 189 23 67 chr2 210433752 210434229 -42822354 - MLT2B2 LTR ERVL -58 457 2 258 302 40 59 chr2 210434231 210434332 -42822251 - L1MDa LINE L1 -4853 1687 1586 2246 84 0 3 chr2 210434332 210434631 -42821952 - AluY SINE Alu -13 298 1 258 302 40 59 chr2 210434631 210434751 -42821832 - L1MDa LINE L1 -4954 1586 1470 1863 121 13 51 chr2 210434756 210435070 -42821513 - AluSq SINE Alu -9 304 3 21 67 0 0 chr2 210435089 210435119 -42821464 + AT_rich Low_complexity Low_complexity 1 30 0 2299 65 0 13 chr2 210435145 210435451 -42821132 - AluY SINE Alu -9 302 1 965 227 152 4 chr2 210435454 210435718 -42820865 + MER82 DNA MER2_type 351 653 0 1821 151 14 0 chr2 210435785 210436070 -42820513 - AluJb SINE Alu -23 289 1 1887 131 23 13 chr2 210436077 210436382 -42820201 - AluSc SINE Alu -1 308 1 1881 121 10 41 chr2 210436512 210436826 -42819757 - AluSx SINE Alu -7 305 2 518 245 87 48 chr2 210436897 210436984 -42819599 - L1M4 LINE L1 -3704 2442 2360 2189 113 0 0 chr2 210436984 210437286 -42819297 - AluSx SINE Alu -10 302 1 518 245 87 48 chr2 210437286 210437508 -42819075 - L1M4 LINE L1 -3786 2360 2121 32 43 0 0 chr2 210437666 210437712 -42818871 + AT_rich Low_complexity Low_complexity 1 46 0 857 226 6 0 chr2 210437748 210437912 -42818671 + AluJb SINE Alu 121 285 -27 1351 82 6 6 chr2 210438135 210438317 -42818266 - AluSp SINE Alu -15 298 117 288 135 0 0 chr2 210438417 210438469 -42818114 + AluSp/q SINE Alu 250 301 -2 235 164 104 0 chr2 210438476 210438543 -42818040 + L2 LINE L2 2334 2407 -907 1833 144 0 13 chr2 210438550 210438848 -42817735 - AluSx SINE Alu -18 294 1 1228 193 21 13 chr2 210438849 210439087 -42817496 - MER66B LTR ERV1 -220 266 27 668 228 23 74 chr2 210439093 210439234 -42817349 + L2 LINE L2 2573 2701 -613 2165 115 0 6 chr2 210439234 210439548 -42817035 + AluSx SINE Alu 1 312 0 668 228 23 74 chr2 210439548 210439621 -42816962 + L2 LINE L2 2701 2776 -538 2149 117 0 13 chr2 210440015 210440331 -42816252 + AluSx SINE Alu 1 312 0 294 229 10 52 chr2 210440503 210440599 -42815984 + L2 LINE L2 2808 2899 -414 594 94 0 24 chr2 210440599 210440684 -42815899 - AluS SINE Alu -228 84 2 607 273 34 59 chr2 210440750 210440988 -42815595 + MIR SINE MIR 17 248 -14 430 265 116 7 chr2 210441007 210441154 -42815429 - MIR SINE MIR -3 259 97 2123 107 7 3 chr2 210441154 210441452 -42815131 + AluSq SINE Alu 1 299 -14 705 125 0 0 chr2 210441570 210441666 -42814917 - AluS SINE Alu -215 97 2 965 158 9 23 chr2 210441668 210441883 -42814700 + L1M4b LINE L1 1346 1557 -5302 787 164 15 15 chr2 210441885 210442002 -42814581 + AluJo SINE Alu 3 122 -190 216 0 0 0 chr2 210442002 210442026 -42814557 + (TAA)n Simple_repeat Simple_repeat 2 25 0 787 164 15 15 chr2 210442026 210442042 -42814541 + AluJo SINE Alu 121 136 -176 2017 104 11 4 chr2 210442047 210442361 -42814222 + AluSx SINE Alu 1 316 0 6530 80 18 29 chr2 210442366 210443025 -42813558 + MER61-int LTR ERV1 2083 2748 -2469 2900 55 0 36 chr2 210443025 210443293 -42813290 + L1PA8 LINE L1 5801 6077 -95 2001 114 3 10 chr2 210443293 210443575 -42813008 + AluSp SINE Alu 1 283 -30 180 0 0 0 chr2 210443575 210443595 -42812988 + (TC)n Simple_repeat Simple_repeat 1 20 0 * 360 0 0 0 chr2 210443594 210443634 -42812949 + (CA)n Simple_repeat Simple_repeat 1 40 0 2001 114 3 10 chr2 210443595 210443649 -42812934 + AluSp SINE Alu 283 296 -17 2900 55 0 36 chr2 210443649 210443765 -42812818 + L1PA8 LINE L1 6077 6171 -1 6530 80 18 29 chr2 210443765 210444043 -42812540 + MER61-int LTR ERV1 2748 3028 -2189 2296 57 0 14 chr2 210444043 210444340 -42812243 + AluY SINE Alu 1 293 -18 6530 80 18 29 chr2 210444340 210444975 -42811608 + MER61-int LTR ERV1 3028 3631 -1586 1890 135 0 7 chr2 210444975 210445256 -42811327 + AluSx SINE Alu 1 279 -33 320 176 0 14 chr2 210445265 210445339 -42811244 + G-rich Low_complexity Low_complexity 1 73 0 1972 114 61 7 chr2 210445344 210445641 -42810942 + AluSp SINE Alu 1 313 0 5953 108 7 16 chr2 210445644 210446609 -42809974 + MER61-int LTR ERV1 3630 4586 -631 1395 81 0 77 chr2 210446611 210446833 -42809750 - AluSp SINE Alu 0 313 109 1502 110 4 18 chr2 210446982 210447210 -42809373 + AluSg/x SINE Alu 73 297 -15 909 210 10 10 chr2 210447215 210447697 -42808886 + L1M4b LINE L1 181 844 -6015 1033 131 14 99 chr2 210447697 210447751 -42808832 + Tigger2a DNA MER2_type 2 59 -2649 2078 120 0 13 chr2 210447751 210448052 -42808531 - AluSg SINE Alu -13 297 1 1033 131 14 99 chr2 210448052 210448214 -42808369 + Tigger2a DNA MER2_type 59 199 -235 2394 162 62 6 chr2 210448214 210448684 -42807899 - MER41E LTR ERV1 0 512 17 1998 102 0 68 chr2 210448713 210449036 -42807547 - AluSg1 SINE Alu -8 301 1 279 114 0 0 chr2 210449113 210449157 -42807426 + (CA)n Simple_repeat Simple_repeat 2 45 0 657 193 0 71 chr2 210449166 210449288 -42807295 - FLAM_A SINE Alu -181 130 18 4881 60 13 67 chr2 210449288 210449535 -42807048 - PABL_A LTR ERV1 0 660 401 2115 101 0 14 chr2 210449535 210449822 -42806761 - AluSx SINE Alu -24 288 6 4881 60 13 67 chr2 210449822 210450272 -42806311 - PABL_A LTR ERV1 -259 401 1 657 193 0 71 chr2 210450272 210450289 -42806294 - FLAM_A SINE Alu -293 18 1 1588 171 0 8 chr2 210450303 210450567 -42806016 - AluJo SINE Alu -45 267 6 770 150 24 6 chr2 210450569 210450736 -42805847 + Tigger2a DNA MER2_type 205 374 -70 1322 186 14 54 chr2 210450737 210450783 -42805800 - AluJb SINE Alu -2 310 264 2195 116 3 0 chr2 210450783 210451084 -42805499 + AluSp SINE Alu 3 304 -9 1322 186 14 54 chr2 210451084 210451333 -42805250 - AluJb SINE Alu -48 264 27 522 122 12 24 chr2 210451461 210451543 -42805040 + AluSq/x SINE Alu 59 139 -173 2192 87 0 36 chr2 210451544 210451853 -42804730 + AluSg SINE Alu 1 298 -12 399 297 97 16 chr2 210451854 210452039 -42804544 - L2 LINE L2 -172 3141 2942 657 197 16 8 chr2 210452265 210452387 -42804196 - MIR SINE MIR -64 198 76 1127 152 0 76 chr2 210452648 210452872 -42803711 + AluJo SINE Alu 87 293 -19 322 331 190 0 chr2 210453029 210453171 -42803412 + MER91A DNA MER1_type 6 174 -22 412 350 0 8 chr2 210453224 210453347 -42803236 + MIR SINE MIR 5 126 -136 2159 109 0 7 chr2 210453352 210453654 -42802929 - AluSq SINE Alu -13 300 1 2044 143 0 0 chr2 210453656 210453950 -42802633 - AluJo SINE Alu -18 294 1 2212 106 0 0 chr2 210453962 210454264 -42802319 - AluSc SINE Alu -7 302 1 1917 111 0 43 chr2 210454266 210454591 -42801992 - AluSx SINE Alu -1 311 1 432 161 0 0 chr2 210456145 210456226 -42800357 + CT-rich Low_complexity Low_complexity 3 83 0 615 152 20 0 chr2 210457116 210457215 -42799368 + AluJo/FLAM SINE Alu 25 125 -187 2077 89 9 38 chr2 210457215 210457530 -42799053 - AluSg SINE Alu -3 307 2 2459 46 0 10 chr2 210457531 210457835 -42798748 - AluY SINE Alu -9 302 2 2219 85 0 35 chr2 210457840 210458158 -42798425 - AluSx SINE Alu -5 307 1 661 84 37 9 chr2 210458261 210458368 -42798215 - AluSg/x SINE Alu -2 308 199 369 141 0 0 chr2 210459631 210459702 -42796881 + (GGA)n Simple_repeat Simple_repeat 2 72 0 210 200 20 0 chr2 210462737 210462787 -42793796 + (TA)n Simple_repeat Simple_repeat 1 51 0 2242 100 7 0 chr2 210463976 210464277 -42792306 - AluSq SINE Alu -8 305 3 867 142 0 0 chr2 210464306 210464426 -42792157 + FLAM_C SINE Alu 1 120 -23 253 155 69 112 chr2 210464447 210464514 -42792069 - Charlie8 DNA MER1_type -184 157 96 2223 106 0 0 chr2 210464514 210464815 -42791768 + AluSg SINE Alu 1 301 -9 253 155 69 112 chr2 210464815 210464863 -42791720 - Charlie8 DNA MER1_type -245 96 47 277 298 53 35 chr2 210464893 210465007 -42791576 - MIR SINE MIR -51 211 96 791 186 0 0 chr2 210465205 210465334 -42791249 - FLAM_C SINE Alu -3 130 2 262 239 29 138 chr2 210465377 210465475 -42791108 - L2 LINE L2 -1 3312 3232 2266 89 3 10 chr2 210465475 210465778 -42790805 - AluSp SINE Alu -12 301 1 262 239 29 138 chr2 210465778 210465817 -42790766 - L2 LINE L2 -81 3232 3190 2365 50 3 25 chr2 210466470 210466789 -42789794 + AluSx SINE Alu 1 312 0 2099 85 0 17 chr2 210467736 210468031 -42788552 + AluSq SINE Alu 20 309 -4 1474 186 0 68 chr2 210468637 210468765 -42787818 + AluJo SINE Alu 1 136 -176 1973 144 0 0 chr2 210468765 210469050 -42787533 - AluJb SINE Alu -27 285 1 1474 186 0 68 chr2 210469050 210469217 -42787366 + AluJo SINE Alu 136 276 -36 2099 88 3 3 chr2 210469362 210469669 -42786914 + AluSx SINE Alu 1 307 0 1956 118 0 11 chr2 210469884 210470163 -42786420 - AluSq SINE Alu -35 278 3 21 0 0 0 chr2 210471201 210471222 -42785361 + GC_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 210473305 210473333 -42783250 + GC_rich Low_complexity Low_complexity 1 28 0 202 172 0 35 chr2 210473353 210473411 -42783172 + (CCG)n Simple_repeat Simple_repeat 3 58 0 189 0 0 0 chr2 210473854 210473875 -42782708 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 27 79 0 0 chr2 210474869 210474907 -42781676 + GC_rich Low_complexity Low_complexity 1 38 0 237 33 0 0 chr2 210476007 210476037 -42780546 + (CAGA)n Simple_repeat Simple_repeat 3 32 0 203 328 0 0 chr2 210476237 210476301 -42780282 + C-rich Low_complexity Low_complexity 5 68 0 891 143 0 0 chr2 210477377 210477510 -42779073 - AluSq/x SINE Alu -180 133 1 282 285 49 8 chr2 210481333 210481456 -42775127 + MER112 DNA MER1_type 34 161 -99 543 16 0 0 chr2 210481456 210481520 -42775063 + (TG)n Simple_repeat Simple_repeat 1 64 0 568 165 0 52 chr2 210481524 210481639 -42774944 - FLAM_C SINE Alu -34 109 1 275 268 12 0 chr2 210481639 210481721 -42774862 + MER112 DNA MER1_type 166 248 -12 353 335 6 43 chr2 210481726 210481887 -42774696 - MIR3 SINE MIR -39 169 15 29 47 0 0 chr2 210482125 210482168 -42774415 + GC_rich Low_complexity Low_complexity 1 43 0 2052 100 16 16 chr2 210482954 210483264 -42773319 + AluSq SINE Alu 2 311 -2 2185 86 3 13 chr2 210483265 210483569 -42773014 + AluSq SINE Alu 1 301 -12 2508 53 0 0 chr2 210484273 210484572 -42772011 - AluY SINE Alu -12 299 1 1863 173 0 7 chr2 210484572 210484879 -42771704 - AluJo SINE Alu -7 305 1 1383 123 5 0 chr2 210586202 210586389 -42670194 - AluSx SINE Alu -123 189 2 1599 249 14 74 chr2 210586390 210586956 -42669627 - L1MC4 LINE L1 -419 7623 7092 1713 125 111 11 chr2 210587567 210587846 -42668737 - AluSx SINE Alu -5 307 1 198 0 0 0 chr2 210587990 210588012 -42668571 + (CA)n Simple_repeat Simple_repeat 2 23 0 190 279 0 0 chr2 210588198 210588241 -42668342 - L3 LINE CR1 -7 1570 1528 21 0 0 0 chr2 210588319 210588340 -42668243 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 210588410 210588433 -42668150 + AT_rich Low_complexity Low_complexity 1 23 0 1796 98 4 4 chr2 210588433 210588668 -42667915 - AluSx SINE Alu -77 235 1 204 40 0 0 chr2 210588828 210588853 -42667730 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 21 36 0 0 chr2 210589369 210589397 -42667186 + AT_rich Low_complexity Low_complexity 1 28 0 640 266 205 15 chr2 210589421 210589763 -42666820 - L1MC4a LINE L1 -1752 6056 5650 2449 89 0 0 chr2 210589822 210590124 -42666459 - AluSx SINE Alu -10 302 1 584 278 39 39 chr2 210590988 210591218 -42665365 - MIR SINE MIR -15 247 18 2064 142 0 19 chr2 210591730 210592047 -42664536 - AluJb SINE Alu -1 311 1 24 0 0 0 chr2 210592513 210592537 -42664046 + AT_rich Low_complexity Low_complexity 1 24 0 23 33 0 0 chr2 210592956 210592986 -42663597 + AT_rich Low_complexity Low_complexity 1 30 0 398 199 6 19 chr2 210593003 210593159 -42663424 + (TA)n Simple_repeat Simple_repeat 1 154 0 472 191 0 12 chr2 210593159 210593243 -42663340 - FLAM_A SINE Alu -25 117 35 1684 120 94 23 chr2 210593855 210593993 -42662590 + AluSq SINE Alu 1 128 -202 2421 75 0 3 chr2 210593993 210594288 -42662295 + AluSc SINE Alu 1 294 -15 1684 120 94 23 chr2 210594288 210594460 -42662123 + AluSq SINE Alu 128 330 0 250 294 98 35 chr2 210594920 210595078 -42661505 + MIR SINE MIR 20 180 -67 2140 125 3 0 chr2 210595199 210595494 -42661089 - AluSx SINE Alu -16 296 1 237 312 0 0 chr2 210595503 210595580 -42661003 + T-rich Low_complexity Low_complexity 1 77 0 25 31 0 0 chr2 210596107 210596139 -42660444 + AT_rich Low_complexity Low_complexity 1 32 0 483 155 0 0 chr2 210596225 210596309 -42660274 + (TCCA)n Simple_repeat Simple_repeat 2 85 0 253 264 147 0 chr2 210596309 210596438 -42660145 - L2 LINE L2 0 3313 3166 250 287 122 35 chr2 210596822 210596937 -42659646 + L2 LINE L2 3146 3270 -2 337 225 13 106 chr2 210597213 210597364 -42659219 - L2 LINE L2 -16 3297 3161 26 0 0 0 chr2 210597364 210597390 -42659193 + AT_rich Low_complexity Low_complexity 1 26 0 4696 144 31 52 chr2 210597467 210597673 -42658910 - L1MA6 LINE L1 -2 6298 6089 626 244 0 0 chr2 210597673 210597792 -42658791 - FLAM_A SINE Alu -14 119 1 4696 144 31 52 chr2 210597792 210598460 -42658123 - L1MA6 LINE L1 -211 6089 5441 2251 115 13 0 chr2 210598460 210598765 -42657818 - AluSx SINE Alu -3 309 1 4696 144 31 52 chr2 210598765 210598813 -42657770 - L1MA6 LINE L1 -859 5441 5394 5079 161 6 21 chr2 210601527 210602316 -42654267 - L1MA6 LINE L1 -755 5391 4616 771 172 0 0 chr2 210602316 210602461 -42654122 - FLAM_A SINE Alu 0 145 1 5079 161 6 21 chr2 210602461 210602625 -42653958 - L1MA6 LINE L1 -1530 4616 4451 252 115 62 52 chr2 210602630 210602726 -42653857 + (TTTAA)n Simple_repeat Simple_repeat 5 101 0 1063 184 0 0 chr2 210602730 210602893 -42653690 + FRAM SINE Alu 1 155 -21 528 320 41 15 chr2 210603164 210603361 -42653222 - MIR SINE MIR -38 224 23 204 337 20 10 chr2 210603401 210603499 -42653084 + L2 LINE L2 2989 3087 -185 2025 100 50 14 chr2 210603799 210604080 -42652503 + AluSx SINE Alu 1 291 -21 1715 167 10 27 chr2 210604436 210604736 -42651847 - AluJb SINE Alu -17 295 1 1846 163 14 3 chr2 210604829 210605117 -42651466 - AluJb SINE Alu -21 291 1 1974 161 0 0 chr2 210605503 210605794 -42650789 + AluSx SINE Alu 1 291 -21 507 154 46 85 chr2 210605815 210605945 -42650638 - MLT1K LTR MaLR -17 571 447 244 242 32 0 chr2 210606335 210606397 -42650186 - MIR SINE MIR -57 151 88 3966 119 16 12 chr2 210606678 210607256 -42649327 + LTR19B LTR ERV1 1 580 0 2730 78 128 2 chr2 210607819 210608217 -42648366 + LTR7 LTR ERV1 1 448 -2 1878 137 7 0 chr2 210608724 210608994 -42647589 - AluSx SINE Alu -2 310 39 203 303 69 41 chr2 210610010 210610155 -42646428 - L3 LINE CR1 -149 1428 1280 750 189 0 21 chr2 210610318 210610461 -42646122 - AluJb SINE Alu -17 295 156 2537 73 0 0 chr2 210610485 210610786 -42645797 - AluY SINE Alu -10 301 1 27 87 0 0 chr2 210610928 210610997 -42645586 + AT_rich Low_complexity Low_complexity 1 69 0 322 202 64 11 chr2 210611329 210611423 -42645160 - L1ME4a LINE L1 -2 6119 6021 931 293 80 39 chr2 210611478 210612018 -42644565 + L2 LINE L2 744 1305 -2009 2083 117 20 3 chr2 210612204 210612502 -42644081 + AluSx SINE Alu 1 303 -9 793 311 30 11 chr2 210612637 210613003 -42643580 + L1ME LINE L1 5296 5668 -494 846 163 0 0 chr2 210613005 210613128 -42643455 - FLAM_C SINE Alu -20 123 1 316 202 30 135 chr2 210613184 210613325 -42643258 + L1ME LINE L1 5702 5829 -333 450 187 0 0 chr2 210613331 210613406 -42643177 - MER116 DNA Mariner 0 80 6 23 68 0 0 chr2 210613435 210613479 -42643104 + AT_rich Low_complexity Low_complexity 1 44 0 2411 76 0 10 chr2 210614070 210614374 -42642209 - AluY SINE Alu -10 301 1 1899 147 3 20 chr2 210614573 210614865 -42641718 + AluSx SINE Alu 5 291 -21 245 211 0 19 chr2 210615102 210615154 -42641429 - MIR SINE MIR -116 146 96 316 276 167 21 chr2 210615994 210616084 -42640499 - L1MC4a LINE L1 -1851 5957 5881 2301 49 4 0 chr2 210616084 210616348 -42640235 + AluSp SINE Alu 1 265 -48 316 276 167 21 chr2 210616348 210616449 -42640134 - L1MC4a LINE L1 -1927 5881 5738 2380 158 57 0 chr2 210616500 210616905 -42639678 + MSTA LTR MaLR 1 428 0 745 264 82 81 chr2 210617220 210617269 -42639314 + L1ME LINE L1 4853 4900 -1221 2393 82 0 0 chr2 210617269 210617563 -42639020 - AluY SINE Alu -16 295 2 745 264 82 81 chr2 210617563 210617875 -42638708 + L1ME LINE L1 4900 5210 -911 703 151 65 0 chr2 210617875 210618014 -42638569 + L1MB3 LINE L1 6036 6183 0 745 264 82 81 chr2 210618014 210618588 -42637995 + L1ME LINE L1 5210 5777 -344 361 169 51 22 chr2 210618620 210618739 -42637844 - LTR50 LTR ERVL 0 789 659 454 237 172 47 chr2 210618835 210619067 -42637516 - LTR41 LTR ERVL -534 261 1 690 223 60 11 chr2 210619162 210619346 -42637237 - MIR SINE MIR -13 249 57 922 125 59 0 chr2 210619484 210619620 -42636963 + MSTA LTR MaLR 285 428 0 25 0 0 0 chr2 210619755 210619780 -42636803 + AT_rich Low_complexity Low_complexity 1 25 0 320 376 119 5 chr2 210620109 210620319 -42636264 - MIR SINE MIR -6 256 23 236 241 27 54 chr2 210620850 210620962 -42635621 - MER113 DNA MER1_type? 0 521 413 2101 115 0 29 chr2 210620962 210621274 -42635309 - AluSx SINE Alu -9 303 1 23 33 0 0 chr2 210621303 210621333 -42635250 + AT_rich Low_complexity Low_complexity 1 30 0 312 250 57 40 chr2 210621388 210621512 -42635071 - MIR SINE MIR -13 249 124 357 245 98 20 chr2 210621517 210621721 -42634862 - L1MEc LINE L1 -3447 2768 2549 523 310 28 44 chr2 210621755 210622116 -42634467 - L1MEc LINE L1 -3987 2409 2055 418 149 46 0 chr2 210622142 210622229 -42634354 - L1MA10 LINE L1 0 6334 6244 2192 128 33 3 chr2 210622269 210622604 -42633979 + MER7A DNA MER2_type 4 346 0 277 304 0 0 chr2 210622615 210622684 -42633899 - L1MA10 LINE L1 -97 6237 6169 778 204 31 0 chr2 210622723 210622919 -42633664 - L1M4 LINE L1 -3123 3023 2822 1593 160 3 74 chr2 210623109 210623421 -42633162 - AluJb SINE Alu -22 290 1 2328 113 0 0 chr2 210623595 210623904 -42632679 - AluSx SINE Alu -1 311 3 348 127 0 0 chr2 210623954 210624009 -42632574 + (A)n Simple_repeat Simple_repeat 1 55 0 2240 135 0 3 chr2 210624946 210625258 -42631325 - AluSx SINE Alu -1 311 1 6005 27 1 1 chr2 210625268 210625946 -42630637 - SVA Other Other 0 1386 723 6729 223 19 26 chr2 210626839 210628591 -42627992 + L1MB1 LINE L1 2279 4017 -2129 229 208 0 42 chr2 210628592 210628664 -42627919 - L1 LINE L1 -2097 4049 3981 * 620 176 4 0 chr2 210628637 210628766 -42627817 + L1MB1 LINE L1 4714 4846 -1300 2085 159 25 8 chr2 210628767 210629126 -42627457 - MLT1A1 LTR MaLR 0 365 1 541 208 130 19 chr2 210629127 210629281 -42627302 + L1 LINE L1 4558 4728 -1418 2983 131 35 0 chr2 210629281 210629763 -42626820 + L1MB1 LINE L1 5669 6167 -1 616 185 4 159 chr2 210630288 210630520 -42626063 - MER76 LTR ERV -481 207 12 2231 118 16 0 chr2 210631751 210632056 -42624527 - AluSx SINE Alu -2 310 1 912 210 27 75 chr2 210632311 210632373 -42624210 - L1MDa LINE L1 -6206 334 271 2534 69 13 0 chr2 210632373 210632679 -42623904 - AluSp SINE Alu -3 310 1 912 210 27 75 chr2 210632679 210632949 -42623634 - L1MDa LINE L1 -6269 271 18 2061 119 20 7 chr2 210633432 210633734 -42622849 + AluSg SINE Alu 3 308 -2 1891 138 23 39 chr2 210633999 210634169 -42622414 - AluSx SINE Alu -10 302 138 2428 65 0 0 chr2 210634169 210634459 -42622124 - AluY SINE Alu -21 290 1 1891 138 23 39 chr2 210634459 210634593 -42621990 - AluSx SINE Alu -174 138 3 538 308 33 50 chr2 210635221 210635418 -42621165 - L1M4 LINE L1 -925 5221 5031 2029 126 7 3 chr2 210635418 210635704 -42620879 - AluSx SINE Alu -21 291 5 538 308 33 50 chr2 210635704 210635870 -42620713 - L1M4 LINE L1 -1115 5031 4864 238 83 42 21 chr2 210635903 210635951 -42620632 - L1MC2 LINE L1 -2 6342 6294 296 189 0 19 chr2 210635951 210636004 -42620579 + AluJo SINE Alu 120 171 -131 653 96 58 0 chr2 210636006 210636110 -42620473 - L1MC2 LINE L1 -2398 5387 5278 846 148 0 0 chr2 210636131 210636259 -42620324 + AluSg/x SINE Alu 174 301 -11 756 71 31 79 chr2 210636259 210636386 -42620197 - L1MC2 LINE L1 -58 6286 6166 1172 241 157 39 chr2 210636387 210636827 -42619756 - MER34 LTR ERV1 0 542 38 2642 128 41 10 chr2 210636827 210637242 -42619341 - MSTA LTR MaLR 0 428 1 1172 241 157 39 chr2 210637242 210637286 -42619297 - MER34 LTR ERV1 -504 38 1 5237 136 40 14 chr2 210637286 210637828 -42618755 - L1MC2 LINE L1 -176 6168 5642 2291 104 10 10 chr2 210637828 210638135 -42618448 + AluSx SINE Alu 1 307 -5 2060 122 7 14 chr2 210638136 210638432 -42618151 + AluSx SINE Alu 1 294 -18 5237 136 40 14 chr2 210638432 210638778 -42617805 - L1MC2 LINE L1 -701 5643 5254 1951 99 0 0 chr2 210638783 210639035 -42617548 - AluSc SINE Alu -3 306 55 459 190 112 9 chr2 210639037 210639153 -42617430 - L1M4 LINE L1 -850 5296 5169 1885 137 27 40 chr2 210639505 210639804 -42616779 - AluJo SINE Alu -17 295 1 270 0 0 0 chr2 210639809 210639839 -42616744 + (T)n Simple_repeat Simple_repeat 1 30 0 185 222 37 37 chr2 210639874 210639928 -42616655 + MIR SINE MIR 79 132 -76 605 118 118 0 chr2 210640079 210640181 -42616402 + L1MB3 LINE L1 6065 6178 -5 2408 74 7 0 chr2 210640316 210640613 -42615970 + AluSp SINE Alu 1 299 -14 1780 166 28 7 chr2 210641603 210641893 -42614690 - AluSx SINE Alu -16 296 1 232 310 171 13 chr2 210642090 210642248 -42614335 + MIR SINE MIR 9 191 -71 249 33 0 0 chr2 210642260 210642290 -42614293 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 1679 172 0 11 chr2 210642290 210642569 -42614014 - AluJo SINE Alu -32 280 5 424 330 85 0 chr2 210642801 210642977 -42613606 + MIR SINE MIR 66 256 -6 226 263 63 21 chr2 210643187 210643282 -42613301 + MIR SINE MIR 109 207 -55 2300 71 3 10 chr2 210643379 210643673 -42612910 + AluSp SINE Alu 1 292 -21 2217 121 0 0 chr2 210643715 210644013 -42612570 + AluSx SINE Alu 1 298 -14 217 239 0 0 chr2 210644148 210644194 -42612389 + (AGCTG)n Simple_repeat Simple_repeat 3 48 0 329 256 124 0 chr2 210645491 210645612 -42610971 + MIR SINE MIR 78 213 -49 1795 167 10 20 chr2 210645681 210645987 -42610596 - AluJb SINE Alu -5 307 5 184 222 0 44 chr2 210646078 210646123 -42610460 - L2 LINE L2 -92 3221 3179 187 275 0 0 chr2 210646213 210646253 -42610330 + L2 LINE L2 3227 3266 -47 237 256 0 43 chr2 210646397 210646514 -42610069 + T-rich Low_complexity Low_complexity 1 112 0 355 282 51 0 chr2 210646728 210646845 -42609738 - MIR3 SINE MIR -1 207 85 183 227 0 0 chr2 210647510 210647576 -42609007 + (CA)n Simple_repeat Simple_repeat 2 67 0 23 33 0 0 chr2 210647596 210647626 -42608957 + AT_rich Low_complexity Low_complexity 1 30 0 2381 74 7 0 chr2 210647626 210647935 -42608648 + AluSp SINE Alu 1 311 -2 191 240 80 13 chr2 210648750 210648825 -42607758 + MIR SINE MIR 124 203 -59 268 270 33 7 chr2 210648828 210648980 -42607603 + (TA)n Simple_repeat Simple_repeat 1 156 0 299 256 147 13 chr2 210649030 210649186 -42607397 + L1ME4a LINE L1 5930 6106 -15 259 284 47 47 chr2 210649813 210649961 -42606622 + L1ME4a LINE L1 5737 5884 -237 256 260 112 24 chr2 210649991 210650160 -42606423 + L1ME4a LINE L1 5937 6120 -1 533 272 82 31 chr2 210650592 210650886 -42605697 - L1MC4a LINE L1 -1933 5875 5567 202 136 0 23 chr2 210650886 210650930 -42605653 + (TTTTTG)n Simple_repeat Simple_repeat 2 44 0 193 321 38 0 chr2 210651007 210651060 -42605523 + L2 LINE L2 3227 3281 -32 984 166 6 0 chr2 210651199 210651374 -42605209 + AluJb SINE Alu 135 310 -2 255 156 0 22 chr2 210651375 210651420 -42605163 - L2 LINE L2 -85 3228 3185 1148 121 6 0 chr2 210651740 210651913 -42604670 + AluSg/x SINE Alu 130 303 -7 612 126 18 18 chr2 210651913 210652024 -42604559 + L1PB2 LINE L1 5900 6010 -141 237 425 24 24 chr2 210652100 210652347 -42604236 + L2 LINE L2 2709 2955 -359 283 289 123 68 chr2 210652374 210652480 -42604103 + L2 LINE L2 3019 3118 -154 2310 86 0 10 chr2 210652480 210652793 -42603790 - AluSg SINE Alu 0 310 1 283 289 123 68 chr2 210652793 210652921 -42603662 + L2 LINE L2 3118 3266 -6 21 0 0 0 chr2 210653642 210653663 -42602920 + AT_rich Low_complexity Low_complexity 1 21 0 1975 121 7 0 chr2 210654435 210654740 -42601843 - AluSx SINE Alu 0 307 1 2239 101 0 0 chr2 210654784 210655082 -42601501 + AluSq SINE Alu 1 298 -15 1277 182 116 93 chr2 210655095 210655425 -42601158 - MLT1C LTR MaLR 0 467 146 432 0 0 0 chr2 210655425 210655473 -42601110 + (TG)n Simple_repeat Simple_repeat 1 48 0 1747 146 4 4 chr2 210655473 210655754 -42600829 - AluJb SINE Alu -31 281 1 1277 182 116 93 chr2 210655754 210655872 -42600711 - MLT1C LTR MaLR -320 147 8 184 238 16 79 chr2 210656679 210656742 -42599841 - L2 LINE L2 -1 3271 3213 551 336 65 14 chr2 210656756 210656973 -42599610 - MIR SINE MIR 0 262 35 1515 157 0 20 chr2 210657095 210657350 -42599233 - AluJo SINE Alu -62 250 1 375 185 23 12 chr2 210658482 210658655 -42597928 + (TG)n Simple_repeat Simple_repeat 2 176 0 304 130 29 0 chr2 210658708 210658777 -42597806 + (TG)n Simple_repeat Simple_repeat 2 72 0 2071 111 10 7 chr2 210659567 210659873 -42596710 - AluSx SINE Alu -5 307 1 1779 149 0 0 chr2 210660194 210660469 -42596114 - AluJo SINE Alu -17 295 21 2050 129 0 6 chr2 210660980 210661291 -42595292 - AluSx SINE Alu -3 309 1 752 159 8 8 chr2 210662256 210662388 -42594195 - FLAM_C SINE Alu -10 133 2 600 222 21 21 chr2 210663499 210663643 -42592940 + Charlie8 DNA MER1_type 337 480 -1937 35 54 0 0 chr2 210663655 210663711 -42592872 + AT_rich Low_complexity Low_complexity 1 56 0 697 307 98 40 chr2 210663744 210664217 -42592366 + Charlie8 DNA MER1_type 624 1139 -1278 2183 101 0 0 chr2 210664217 210664505 -42592078 - AluSx SINE Alu -14 298 11 697 307 98 40 chr2 210664505 210664624 -42591959 + Charlie8 DNA MER1_type 1139 1250 -1167 2087 117 17 0 chr2 210665048 210665346 -42591237 - AluSx SINE Alu -9 303 1 2752 245 188 66 chr2 210665400 210666215 -42590368 + HAL1 LINE L1 67 782 -1725 1913 112 0 0 chr2 210666215 210666482 -42590101 + AluSx SINE Alu 31 297 -15 2752 245 188 66 chr2 210666482 210667546 -42589037 + HAL1 LINE L1 782 2248 -259 1882 164 0 0 chr2 210667546 210667850 -42588733 + AluSx SINE Alu 1 304 -8 2752 245 188 66 chr2 210667850 210668145 -42588438 + HAL1 LINE L1 2248 2506 -1 6161 65 23 62 chr2 210668450 210669442 -42587141 - SVA Other Other 0 1386 433 5136 74 28 54 chr2 210669460 210670287 -42586296 - SVA Other Other -520 866 62 1393 106 21 62 chr2 210670772 210671434 -42585149 - SVA Other Other -551 866 433 1402 168 44 31 chr2 210671459 210672286 -42584297 - SVA Other Other -551 866 433 2098 111 0 3 chr2 210673557 210673855 -42582728 - AluSx SINE Alu -15 297 1 236 253 147 63 chr2 210674320 210674510 -42582073 + MIR SINE MIR 7 212 -50 526 351 40 24 chr2 210674768 210675016 -42581567 + MIR SINE MIR 1 252 -10 2183 117 0 0 chr2 210675039 210675347 -42581236 - AluSx SINE Alu -4 308 1 2213 201 78 87 chr2 210675360 210675740 -42580843 - L1MC5 LINE L1 -438 7523 7141 2153 117 0 3 chr2 210675740 210676039 -42580544 - AluSq SINE Alu -15 298 1 2213 201 78 87 chr2 210676039 210676121 -42580462 - L1MC5 LINE L1 -820 7141 7060 1865 141 13 13 chr2 210676121 210676427 -42580156 - AluSx SINE Alu 0 312 7 2213 201 78 87 chr2 210676427 210676583 -42580000 - L1MC5 LINE L1 -901 7060 6904 1816 145 3 7 chr2 210676583 210676873 -42579710 + AluJb SINE Alu 1 289 -23 2213 201 78 87 chr2 210676873 210677190 -42579393 - L1MC5 LINE L1 -1057 6904 6664 180 206 0 0 chr2 210677395 210677429 -42579154 + MER5A DNA MER1_type 131 164 -25 246 32 0 0 chr2 210677716 210677747 -42578836 + (TTA)n Simple_repeat Simple_repeat 1 31 0 2142 96 0 0 chr2 210677747 210678028 -42578555 - AluSq SINE Alu -32 281 1 1908 113 14 7 chr2 210678979 210679292 -42577291 + AluSx SINE Alu 1 315 0 696 240 150 5 chr2 210679434 210679634 -42576949 + MIR SINE MIR 5 233 -29 189 325 12 25 chr2 210679694 210679774 -42576809 + L2 LINE L2 3139 3217 -55 216 0 0 0 chr2 210680065 210680089 -42576494 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 2049 103 0 0 chr2 210680102 210680374 -42576209 - AluSx SINE Alu -40 272 1 589 245 28 28 chr2 210680436 210680579 -42576004 - L2 LINE L2 -1 3312 3170 674 228 149 9 chr2 210680652 210680880 -42575703 + MIR SINE MIR 2 261 -1 315 0 0 0 chr2 210680954 210680989 -42575594 + (TG)n Simple_repeat Simple_repeat 2 36 0 2251 95 3 0 chr2 210681638 210681943 -42574640 - AluY SINE Alu -5 306 1 1903 117 69 0 chr2 210681948 210682238 -42574345 - AluSx SINE Alu -2 310 1 805 105 0 0 chr2 210682544 210682658 -42573925 - AluSc SINE Alu -11 298 185 290 162 84 214 chr2 210682822 210682976 -42573607 + MER63 DNA MER1_type 1 760 -302 346 220 68 114 chr2 210683135 210683267 -42573316 + MER45A DNA AcHobo 2 127 -51 2462 137 5 5 chr2 210683525 210683926 -42572657 - L1MB3 LINE L1 -2 6181 5781 262 159 53 10 chr2 210683926 210683996 -42572587 - MER6 DNA MER2_type -1 864 795 820 152 0 28 chr2 210683998 210684143 -42572440 - FLAM_C SINE Alu -2 141 1 382 76 0 165 chr2 210684149 210684199 -42572384 - MER6 DNA MER2_type -62 803 769 2028 137 0 0 chr2 210684199 210684499 -42572084 + AluSx SINE Alu 1 300 -12 382 76 0 165 chr2 210684499 210684527 -42572056 - MER6 DNA MER2_type -96 769 738 383 188 0 0 chr2 210684532 210684596 -42571987 + MER6 DNA MER2_type 802 865 0 2422 176 25 13 chr2 210684596 210685072 -42571511 - L1MB3 LINE L1 -388 5783 5302 2267 99 0 10 chr2 210685077 210685391 -42571192 - AluSx SINE Alu -1 311 1 2470 61 0 0 chr2 210685395 210685706 -42570877 - AluY SINE Alu 0 311 1 399 206 20 82 chr2 210685778 210685924 -42570659 - L1MC4 LINE L1 0 8042 7906 3410 127 11 38 chr2 210686239 210686948 -42569635 - SVA Other Other -264 1122 433 5132 73 26 55 chr2 210686966 210687785 -42568798 - SVA Other Other -520 866 72 494 0 0 32 chr2 210687785 210687848 -42568735 + (GGGAGA)n Simple_repeat Simple_repeat 3 63 0 2278 56 0 14 chr2 210689734 210690050 -42566533 - AluY SINE Alu 0 312 1 884 212 6 0 chr2 210690367 210690537 -42566046 + AluJb SINE Alu 120 290 -22 22 88 0 0 chr2 210690777 210690834 -42565749 + AT_rich Low_complexity Low_complexity 1 57 0 501 254 147 11 chr2 210690943 210691120 -42565463 + Charlie8 DNA MER1_type 43 243 -2174 289 232 101 0 chr2 210691210 210691279 -42565304 + Charlie8 DNA MER1_type 2331 2406 -11 2530 134 47 0 chr2 210693170 210693505 -42563078 + L1MC2 LINE L1 5901 6260 -84 186 43 0 0 chr2 210693505 210693528 -42563055 + (GGGTG)n Simple_repeat Simple_repeat 2 24 0 2530 134 47 0 chr2 210693528 210693595 -42562988 + L1MC2 LINE L1 6260 6322 -22 38925 45 5 0 chr2 210693676 210699802 -42556781 + L1PA4 LINE L1 2 6150 -5 1742 268 128 57 chr2 210699818 210700817 -42555766 - L2 LINE L2 -405 2909 1840 262 263 203 8 chr2 210700832 210700965 -42555618 + L2 LINE L2 2624 2782 -532 726 266 40 5 chr2 210700994 210701193 -42555390 - L2 LINE L2 -267 3046 2841 2078 194 15 8 chr2 210701193 210701673 -42554910 + L1ME LINE L1 461 943 -5453 659 238 73 45 chr2 210702683 210702969 -42553614 + L1ME LINE L1 4599 4892 -1323 447 95 0 27 chr2 210702995 210703069 -42553514 - MSTA LTR MaLR 0 428 357 39487 65 2 3 chr2 210703069 210709230 -42547353 + L1PA5 LINE L1 1 6154 0 1388 141 226 10 chr2 210709243 210709549 -42547034 - MSTA LTR MaLR -56 372 1 1582 216 31 19 chr2 210709553 210710306 -42546277 + L1ME LINE L1 4940 5705 -528 2496 85 0 0 chr2 210712758 210713065 -42543518 + AluSc SINE Alu 1 307 -2 577 218 0 0 chr2 210713493 210713603 -42542980 + MER81 DNA DNA 1 110 -4 459 204 10 0 chr2 210713775 210713873 -42542710 + L1ME LINE L1 5517 5615 -506 6925 194 19 15 chr2 210713873 210714571 -42542012 + L1 LINE L1 3084 3778 -2368 1482 176 90 14 chr2 210714571 210714850 -42541733 + AluJb SINE Alu 1 300 -12 6925 194 19 15 chr2 210714850 210715808 -42540775 + L1 LINE L1 3778 4746 -1400 2574 184 20 15 chr2 210715826 210719358 -42537225 + L1PB1 LINE L1 6 4025 -2842 180 0 0 0 chr2 210719358 210719378 -42537205 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2574 184 20 15 chr2 210719378 210722235 -42534348 + L1PB1 LINE L1 4025 6867 0 2929 184 7 0 chr2 210722245 210722860 -42533723 + L1P LINE L1 4744 5362 -784 13475 200 30 28 chr2 210722881 210725118 -42531465 + L1PB3 LINE L1 3 2233 -4637 2256 110 17 0 chr2 210725118 210725418 -42531165 + AluSx SINE Alu 1 305 -7 13475 200 30 28 chr2 210725418 210726719 -42529864 + L1PB3 LINE L1 2233 3530 -3340 1463 130 14 5 chr2 210726719 210726935 -42529648 + AluSg/x SINE Alu 82 299 -11 13475 200 30 28 chr2 210726935 210727982 -42528601 + L1PB3 LINE L1 3530 4573 -2297 1937 142 10 20 chr2 210727982 210728285 -42528298 + AluSx SINE Alu 5 304 -8 13475 200 30 28 chr2 210728285 210731449 -42525134 + L1PB3 LINE L1 4573 6867 -3 2265 107 3 22 chr2 210731539 210731856 -42524727 - AluSx SINE Alu -1 311 1 395 250 177 21 chr2 210732058 210732250 -42524333 - L1ME1 LINE L1 -29 6137 5916 3295 122 18 7 chr2 210732290 210732848 -42523735 + L1PA16 LINE L1 5354 5917 -249 883 126 151 0 chr2 210732850 210733009 -42523574 + L1PA16 LINE L1 5973 6155 -11 376 217 0 0 chr2 210733057 210733140 -42523443 + L1ME LINE L1 5690 5772 -349 190 256 26 51 chr2 210733771 210733849 -42522734 - MER5B DNA MER1_type -11 167 92 25 0 0 0 chr2 210734077 210734102 -42522481 + AT_rich Low_complexity Low_complexity 1 25 0 1831 177 3 10 chr2 210734103 210734403 -42522180 - AluJo SINE Alu -14 298 1 3059 121 12 24 chr2 210734665 210735176 -42521407 + L1MC1 LINE L1 5822 6326 -7 5404 147 10 16 chr2 210735247 210735378 -42521205 - L1MA7 LINE L1 0 7710 7580 2151 120 3 7 chr2 210735378 210735679 -42520904 - AluSx SINE Alu -12 300 1 5404 147 10 16 chr2 210735679 210736555 -42520028 - L1MA7 LINE L1 -130 7580 6709 * 6385 33 6 10 chr2 210736550 210737364 -42519219 - L1PA4 LINE L1 -11 6144 5334 3489 176 29 26 chr2 210737340 210737633 -42518950 - L1MA7 LINE L1 -2238 5327 5036 * 2380 93 3 10 chr2 210737633 210737943 -42518640 + AluSp SINE Alu 1 308 -5 3489 176 29 26 chr2 210737943 210738516 -42518067 - L1MA7 LINE L1 -2529 5036 4459 2985 152 42 5 chr2 210738550 210739124 -42517459 - L1 LINE L1 -1232 6333 5739 4299 127 3 14 chr2 210739124 210739792 -42516791 - L1PA15 LINE L1 0 6165 5505 10975 169 35 31 chr2 210739792 210740700 -42515883 - L1M1 LINE L1 -650 6355 5452 1628 169 4 0 chr2 210740700 210740954 -42515629 - AluJo SINE Alu -57 255 1 10975 169 35 31 chr2 210740954 210742882 -42513701 - L1M1 LINE L1 -1553 5452 3504 1831 227 3 3 chr2 210742890 210743255 -42513328 - L1M1 LINE L1 -5504 1345 981 1729 259 77 27 chr2 210743255 210744234 -42512349 - L1MA7 LINE L1 -3891 3674 2647 494 138 0 0 chr2 210744245 210744325 -42512258 + L1MC2 LINE L1 6251 6330 -14 218 178 19 45 chr2 210744524 210744681 -42511902 + (TA)n Simple_repeat Simple_repeat 1 153 0 717 231 39 51 chr2 210744710 210745022 -42511561 - L1MA9 LINE L1 -74 6238 5931 195 167 0 0 chr2 210745125 210745167 -42511416 + GA-rich Low_complexity Low_complexity 2 43 0 188 282 0 0 chr2 210745965 210746004 -42510579 - L2 LINE L2 -86 3186 3148 219 264 75 28 chr2 210747157 210747263 -42509320 + MIR SINE MIR 152 262 0 420 20 0 0 chr2 210748582 210748631 -42507952 + (TG)n Simple_repeat Simple_repeat 2 50 0 2019 151 0 0 chr2 210749014 210749306 -42507277 + AluSx SINE Alu 1 292 -20 430 284 136 17 chr2 210750117 210750293 -42506290 + MIR SINE MIR 24 220 -42 300 285 131 7 chr2 210750592 210750729 -42505854 + L2 LINE L2 3160 3313 0 214 261 0 0 chr2 210750756 210750821 -42505762 + A-rich Low_complexity Low_complexity 1 65 0 352 269 50 37 chr2 210751156 210751357 -42505226 + MIR SINE MIR 2 255 -7 1133 165 30 99 chr2 210751980 210752283 -42504300 - MLT1D LTR MaLR -223 282 1 1120 264 111 31 chr2 210752290 210752748 -42503835 + L2 LINE L2 2819 3313 0 1982 137 3 0 chr2 210753235 210753527 -42503056 + AluSx SINE Alu 1 293 -19 1934 121 4 11 chr2 210753533 210753835 -42502748 + AluSx SINE Alu 6 305 0 2227 102 3 0 chr2 210754793 210755132 -42501451 + AluSx SINE Alu 1 340 0 261 231 194 26 chr2 210755176 210755308 -42501275 - MIR SINE MIR -70 138 4 386 321 46 0 chr2 210755511 210755642 -42500941 + HAL1 LINE L1 2 138 -2369 1356 144 122 14 chr2 210755845 210756240 -42500343 + MLT1D LTR MaLR 3 496 -9 660 234 195 57 chr2 210756251 210756692 -42499891 + HAL1 LINE L1 1979 2480 -27 1797 148 19 38 chr2 210756712 210757029 -42499554 - AluSx SINE Alu -1 311 1 2196 120 0 7 chr2 210758139 210758448 -42498135 + AluSx SINE Alu 6 312 0 1736 192 3 0 chr2 210758712 210759020 -42497563 + AluJo SINE Alu 4 312 0 2224 121 3 0 chr2 210759284 210759591 -42496992 - AluSq SINE Alu -5 308 1 245 350 0 0 chr2 210759779 210759879 -42496704 - L1MC4a LINE L1 -1882 5926 5827 441 237 15 38 chr2 210761073 210761204 -42495379 + MER112 DNA MER1_type 127 254 -6 284 188 72 29 chr2 210761214 210761283 -42495300 - L2 LINE L2 0 3272 3201 1566 147 3 97 chr2 210761362 210761543 -42495040 - AluJo SINE Alu -16 296 156 2822 7 0 3 chr2 210761543 210761848 -42494735 - AluYa5 SINE Alu -7 304 1 1566 147 3 97 chr2 210761848 210761986 -42494597 - AluJo SINE Alu -156 156 7 1185 299 129 17 chr2 210762047 210762643 -42493940 - L2 LINE L2 -539 2775 2113 435 294 119 10 chr2 210762705 210762899 -42493684 - MLT1L LTR MaLR -49 566 352 2733 232 55 21 chr2 210763810 210763927 -42492656 + Zaphod DNA AcHobo 2 114 -3917 2101 155 0 0 chr2 210763927 210764236 -42492347 + AluSx SINE Alu 1 309 -3 2733 232 55 21 chr2 210764236 210764772 -42491811 + Zaphod DNA AcHobo 114 677 -3354 449 193 37 18 chr2 210764761 210764870 -42491713 + Zaphod DNA AcHobo 3282 3392 -639 * 308 135 135 83 chr2 210764881 210765014 -42491569 + Zaphod DNA AcHobo 3620 3759 -272 711 267 112 16 chr2 210765037 210765359 -42491224 + Tigger8 DNA MER2_type 115 467 -199 14257 187 33 16 chr2 210765469 210768193 -42488390 + L1PA16 LINE L1 1 2676 -4193 1990 150 0 0 chr2 210768193 210768479 -42488104 - AluSx SINE Alu -24 288 3 14257 187 33 16 chr2 210768479 210770633 -42485950 + L1PA16 LINE L1 2676 4734 -2135 2263 121 3 0 chr2 210770633 210770939 -42485644 + AluSx SINE Alu 1 307 -5 14257 187 33 16 chr2 210770939 210772434 -42484149 + L1PA16 LINE L1 4734 6201 -668 34176 93 11 57 chr2 210772447 210772833 -42483750 + L1PA7 LINE L1 12 414 -5740 225 0 0 0 chr2 210772833 210772858 -42483725 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 34176 93 11 57 chr2 210772858 210778906 -42477677 + L1PA7 LINE L1 414 6145 -9 1818 193 0 0 chr2 210778921 210779226 -42477357 + AluJb SINE Alu 2 306 -6 4416 140 12 6 chr2 210779226 210779896 -42476687 + L1PA16 LINE L1 6196 6869 0 21 89 0 0 chr2 210782965 210783021 -42473562 + AT_rich Low_complexity Low_complexity 1 56 0 213 291 51 13 chr2 210785170 210785249 -42471334 + MIR SINE MIR 49 130 -78 1258 261 140 37 chr2 210786457 210786911 -42469672 + MER77 LTR ERV1 135 604 -1 263 298 0 12 chr2 210786957 210787041 -42469542 + MIR SINE MIR 49 131 -77 4693 157 109 120 chr2 210787659 210788475 -42468108 + Charlie1a DNA MER1_type 2 927 -1834 1024 98 8 0 chr2 210788475 210788607 -42467976 - AluSq/x SINE Alu -180 133 1 4693 157 109 120 chr2 210788607 210789130 -42467453 + Charlie1a DNA MER1_type 927 1455 0 201 360 13 0 chr2 210790213 210790288 -42466295 - L3 LINE CR1 -5 1572 1497 514 253 34 7 chr2 210791460 210791606 -42464977 - MER104 DNA Tc2 -2 178 29 232 250 36 0 chr2 210791702 210791758 -42464825 + HsTC2 DNA Tc2 21 78 -1820 426 309 56 56 chr2 210791921 210792241 -42464342 + HsTC2 DNA Tc2 569 888 -1010 370 225 80 53 chr2 210793239 210793390 -42463193 + L1ME4a LINE L1 5944 6098 -23 2494 57 0 60 chr2 210793394 210793725 -42462858 + AluY SINE Alu 1 311 0 338 176 109 42 chr2 210793831 210793950 -42462633 + L1ME4a LINE L1 5993 6119 -2 3933 185 161 85 chr2 210794044 210795409 -42461174 + L1MC4 LINE L1 6574 8042 0 21 36 0 0 chr2 210795563 210795591 -42460992 + AT_rich Low_complexity Low_complexity 1 28 0 200 292 0 0 chr2 210795600 210795648 -42460935 - L2 LINE L2 -74 3239 3192 508 251 6 55 chr2 210796722 210796885 -42459698 + MER5A DNA MER1_type 7 161 -28 1679 174 4 11 chr2 210796900 210797181 -42459402 - AluJo SINE Alu -33 279 1 25 0 0 0 chr2 210797217 210797242 -42459341 + AT_rich Low_complexity Low_complexity 1 25 0 2197 116 10 0 chr2 210797462 210797772 -42458811 - AluSq SINE Alu 0 313 1 409 222 61 10 chr2 210798338 210798437 -42458146 + L2 LINE L2 3210 3313 0 24 0 0 0 chr2 210798585 210798609 -42457974 + AT_rich Low_complexity Low_complexity 1 24 0 3065 169 44 33 chr2 210799562 210800106 -42456477 - MER44D DNA MER2_type 0 605 1 292 265 132 0 chr2 210800269 210800392 -42456191 + MIR3 SINE MIR 53 199 -9 185 302 19 0 chr2 210802765 210802818 -42453765 + L2 LINE L2 3217 3270 -2 186 227 68 0 chr2 210802966 210803010 -42453573 + L2 LINE L2 3258 3304 -9 24 0 0 0 chr2 210803460 210803484 -42453099 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 210804270 210804291 -42452292 + AT_rich Low_complexity Low_complexity 1 21 0 263 277 129 10 chr2 210805147 210805248 -42451335 + MIR SINE MIR 85 197 -65 239 280 10 50 chr2 210805950 210806050 -42450533 - MER5B DNA MER1_type -80 98 3 335 264 83 56 chr2 210806357 210806501 -42450082 - MIR3 SINE MIR -3 205 58 558 199 143 41 chr2 210806690 210806886 -42449697 + L1ME4a LINE L1 5906 6121 0 598 251 56 11 chr2 210808099 210808278 -42448305 - MER105 DNA DNA 0 204 18 770 187 53 35 chr2 210808559 210808730 -42447853 - MER5A DNA MER1_type 0 189 16 2283 96 3 7 chr2 210808834 210809137 -42447446 + AluSg SINE Alu 1 302 -8 2686 121 8 0 chr2 210810982 210811370 -42445213 - L1MA5 LINE L1 -3 6297 5907 1174 148 19 28 chr2 210811445 210811661 -42444922 - L1PA13 LINE L1 0 6163 5950 621 222 71 52 chr2 210812206 210812418 -42444165 + MIR SINE MIR 47 262 0 2409 45 0 29 chr2 210813147 210813456 -42443127 + AluY SINE Alu 1 300 -11 339 253 212 47 chr2 210816735 210816905 -42439678 - MIR3 SINE MIR -9 199 2 334 352 127 9 chr2 210817051 210817264 -42439319 + MIR SINE MIR 20 257 -5 3409 240 116 45 chr2 210818337 210819237 -42437346 + L1MEc LINE L1 806 1640 -4742 1666 146 16 74 chr2 210819237 210819546 -42437037 + AluJb SINE Alu 1 291 -21 3409 240 116 45 chr2 210819546 210820448 -42436135 + L1MEc LINE L1 1640 2476 -3906 195 100 0 0 chr2 210820448 210820478 -42436105 + (CA)n Simple_repeat Simple_repeat 2 31 0 3409 240 116 45 chr2 210820478 210821317 -42435266 + L1MEc LINE L1 2476 4877 -1505 1355 134 23 9 chr2 210821329 210821545 -42435038 - AluJo SINE Alu -32 280 62 1111 242 71 23 chr2 210821545 210821938 -42434645 + L1MEc LINE L1 4864 5275 -1107 874 208 88 39 chr2 210821951 210822235 -42434348 + L1MEc LINE L1 5322 5619 -763 192 97 0 0 chr2 210826808 210826839 -42429744 + (T)n Simple_repeat Simple_repeat 1 31 0 198 118 0 0 chr2 210826986 210827020 -42429563 + (T)n Simple_repeat Simple_repeat 1 34 0 3617 41 12 2 chr2 210829385 210829803 -42426780 + L1PA3 LINE L1 5734 6155 0 637 60 48 0 chr2 210830430 210830513 -42426070 - MER85 DNA T2_type 0 139 53 6994 62 8 2 chr2 210830613 210831673 -42424910 + L1PA5 LINE L1 5068 6133 -21 385 326 58 54 chr2 210831753 210831995 -42424588 - MIR SINE MIR -18 244 2 28 0 6 0 chr2 210833284 210833343 -42423240 + GC_rich Low_complexity Low_complexity 1 28 0 927 72 58 0 chr2 210833613 210833752 -42422831 + AluY SINE Alu 152 298 -13 202 288 0 25 chr2 210835034 210835114 -42421469 + CT-rich Low_complexity Low_complexity 2 79 0 254 336 128 22 chr2 210838168 210838489 -42418094 - L2 LINE L2 -837 2477 2123 553 158 12 0 chr2 210840432 210840514 -42416069 + AluS SINE Alu 2 84 -229 8427 47 2 2 chr2 210840614 210841639 -42414944 - L1P LINE L1 -1054 5092 4068 * 11495 119 31 3 chr2 210841608 210843348 -42413235 - L1P LINE L1 -4356 1790 3 1895 194 34 41 chr2 210843645 210844082 -42412501 - MLT1D LTR MaLR -8 497 64 916 225 86 18 chr2 210844197 210844477 -42412106 + L1ME1 LINE L1 5863 6161 -5 1108 231 45 7 chr2 210844481 210844771 -42411812 + L1MC/D LINE L1 1838 2138 -4258 754 150 180 85 chr2 210844771 210844971 -42411612 - MER20 DNA MER1_type 0 219 1 835 259 82 78 chr2 210844971 210845132 -42411451 + L1MC/D LINE L1 5449 5608 -2269 2264 112 0 3 chr2 210845132 210845435 -42411148 + AluSx SINE Alu 1 302 -10 835 259 82 78 chr2 210845435 210845698 -42410885 + L1MC/D LINE L1 5608 5875 -2002 531 269 79 70 chr2 210846517 210846744 -42409839 - MLT1L LTR MaLR -372 243 15 1355 185 78 72 chr2 210847005 210847061 -42409522 + MER58B DNA MER1_type 5 59 -2361 2470 58 0 16 chr2 210847061 210847373 -42409210 - AluY SINE Alu -4 307 1 1355 185 78 72 chr2 210847373 210847651 -42408932 + MER58B DNA MER1_type 59 341 0 2266 97 3 0 chr2 210847873 210848163 -42408420 - AluSq SINE Alu -18 295 5 208 158 26 0 chr2 210848218 210848256 -42408327 + GA-rich Low_complexity Low_complexity 2 40 0 3646 113 27 15 chr2 210848532 210849053 -42407530 + MER1A DNA MER1_type 1 527 0 1982 137 3 0 chr2 210849514 210849806 -42406777 + AluSx SINE Alu 1 293 -19 1934 121 4 11 chr2 210849812 210850114 -42406469 + AluSx SINE Alu 6 305 0 2237 92 0 3 chr2 210851086 210851370 -42405213 + AluSg SINE Alu 17 299 -11 1209 281 114 5 chr2 210851450 210852029 -42404554 - L1MEc LINE L1 -4947 1449 808 659 217 0 0 chr2 210852036 210852156 -42404427 - FLAM_A SINE Alu -7 135 16 1733 156 14 18 chr2 210852194 210852477 -42404106 - AluJo SINE Alu -30 282 1 441 282 60 68 chr2 210852477 210852743 -42403840 - L1MEc LINE L1 -5569 827 564 257 152 0 0 chr2 210852843 210852889 -42403694 + Alu SINE Alu 240 285 -17 2436 54 3 0 chr2 210853705 210854000 -42402583 + AluY SINE Alu 1 296 -15 21 36 0 0 chr2 210855090 210855118 -42401465 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 210855875 210855896 -42400687 + AT_rich Low_complexity Low_complexity 1 21 0 914 197 3 127 chr2 210855918 210856202 -42400381 - MIR SINE MIR 0 262 14 469 165 44 0 chr2 210856202 210856293 -42400290 + MLT1D LTR MaLR 1 95 -410 23 33 0 0 chr2 210857771 210857801 -42398782 + AT_rich Low_complexity Low_complexity 1 30 0 278 398 35 0 chr2 210865989 210866190 -42390393 + L2 LINE L2 2897 3104 -168 695 275 82 0 chr2 210866326 210866497 -42390086 + MIR SINE MIR 1 185 -77 383 333 126 63 chr2 210866797 210867145 -42389438 + L2 LINE L2 2617 2942 -330 2179 113 66 48 chr2 210867145 210867524 -42389059 - MLT1B LTR MaLR -4 386 1 383 333 126 63 chr2 210867524 210867792 -42388791 + L2 LINE L2 2942 3271 -1 335 270 224 25 chr2 210867801 210867997 -42388586 + MIR SINE MIR 20 254 -8 383 219 250 12 chr2 210868028 210868192 -42388391 + MIR SINE MIR 60 262 0 1157 181 224 0 chr2 210868486 210868723 -42387860 - AluJo SINE Alu -11 291 2 189 276 69 46 chr2 210869128 210869215 -42387368 + MIR SINE MIR 166 254 -8 2154 111 3 0 chr2 210869215 210869389 -42387194 - AluSp SINE Alu -6 307 130 1665 67 19 0 chr2 210869389 210869599 -42386984 - AluSg/x SINE Alu -15 297 84 2154 111 3 0 chr2 210869599 210869730 -42386853 - AluSp SINE Alu -183 130 1 2491 73 0 0 chr2 210869872 210870172 -42386411 + AluSc SINE Alu 1 300 -9 25 75 0 0 chr2 210871521 210871574 -42385009 + GC_rich Low_complexity Low_complexity 1 53 0 21 36 0 0 chr2 210871960 210871988 -42384595 + GC_rich Low_complexity Low_complexity 1 28 0 364 167 0 0 chr2 210872258 210872318 -42384265 + L2 LINE L2 3213 3272 0 262 298 106 0 chr2 210873111 210873215 -42383368 + L2 LINE L2 3152 3266 -6 408 219 75 48 chr2 210873280 210873426 -42383157 - L1ME LINE L1 -460 5661 5512 1589 204 35 0 chr2 210875169 210875453 -42381130 + AluJb SINE Alu 1 294 -18 1066 197 75 33 chr2 210875794 210876007 -42380576 - MER58A DNA MER1_type -1 223 2 250 341 33 0 chr2 210876052 210876143 -42380440 - MIR3 SINE MIR -25 183 90 2434 159 63 7 chr2 210876538 210876952 -42379631 - MER68 LTR ERV1 -125 437 1 2169 114 0 14 chr2 210877483 210877780 -42378803 + AluSx SINE Alu 9 301 -11 963 144 0 0 chr2 210878617 210878742 -42377841 + FLAM_C SINE Alu 1 125 -8 408 311 156 48 chr2 210879020 210879502 -42377081 + L2 LINE L2 2224 2757 -557 6587 116 26 44 chr2 210879987 210880924 -42375659 - L1MA3 LINE L1 -9 6296 5374 1285 230 64 0 chr2 210880924 210881207 -42375376 - AluJo SINE Alu -9 303 3 6587 116 26 44 chr2 210881207 210881884 -42374699 - L1MA3 LINE L1 -931 5374 4686 * 22535 124 44 22 chr2 210881881 210882795 -42373788 - L1 LINE L1 -3741 3824 2932 2161 107 17 3 chr2 210882795 210883086 -42373497 + AluSg SINE Alu 3 297 -13 22535 124 44 22 chr2 210883086 210885900 -42370683 - L1 LINE L1 -4633 2932 13 239 347 11 21 chr2 210886484 210886579 -42370004 - L3 LINE CR1 -2 1575 1482 890 301 163 50 chr2 210887213 210887810 -42368773 - L3 LINE CR1 -168 1409 746 285 29 0 0 chr2 210887812 210887846 -42368737 + (T)n Simple_repeat Simple_repeat 1 34 0 464 345 84 13 chr2 210887975 210888201 -42368382 - L3 LINE CR1 -1174 403 162 196 289 44 100 chr2 210890276 210890366 -42366217 - L2 LINE L2 -15 3257 3173 361 265 86 8 chr2 210890544 210890661 -42365922 - LTR67 LTR ERVL -6 551 426 195 260 385 10 chr2 210891274 210891370 -42365213 - MIR SINE MIR -118 144 13 330 346 19 38 chr2 210891452 210891611 -42364972 + MER5B DNA MER1_type 28 172 -6 2265 208 69 14 chr2 210891824 210892330 -42364253 + L1ME1 LINE L1 5471 6004 -162 324 182 0 0 chr2 210892326 210892381 -42364202 - L1ME LINE L1 -356 5810 5756 * 647 213 96 0 chr2 210892360 210892539 -42364044 - L1ME LINE L1 -694 5472 5300 396 255 0 0 chr2 210892560 210892658 -42363925 - L1ME LINE L1 -931 5215 5118 1286 165 109 97 chr2 210892839 210893179 -42363404 - MER2 DNA MER2_type 0 344 1 2611 49 0 0 chr2 210893623 210893927 -42362656 - AluY SINE Alu -7 304 1 387 208 50 33 chr2 210893935 210894055 -42362528 + L1ME4a LINE L1 5929 6050 -71 553 300 91 14 chr2 210894076 210894296 -42362287 + MIR SINE MIR 6 242 -20 394 306 19 81 chr2 210894759 210895017 -42361566 + L2 LINE L2 3027 3268 -4 23 0 0 0 chr2 210895080 210895103 -42361480 + AT_rich Low_complexity Low_complexity 1 23 0 236 231 264 0 chr2 210895649 210895740 -42360843 - L2 LINE L2 -5 3267 3153 2271 109 0 22 chr2 210896430 210896741 -42359842 + AluSx SINE Alu 1 304 -8 2549 64 0 13 chr2 210896790 210897101 -42359482 - AluY SINE Alu -4 307 1 2332 97 3 0 chr2 210898529 210898827 -42357756 + AluSx SINE Alu 1 299 -13 192 311 0 0 chr2 210898827 210898872 -42357711 + MIR SINE MIR 40 84 -124 285 264 154 0 chr2 210901042 210901133 -42355450 + HERVL LTR ERVL 5183 5287 -367 1281 224 84 53 chr2 210901418 210901797 -42354786 - MLT2B1 LTR ERVL -41 479 89 1883 206 40 72 chr2 210901798 210901861 -42354722 + MLT2B3 LTR ERVL 1 64 -490 1779 130 73 6 chr2 210901861 210902177 -42354406 - MER1B DNA MER1_type 0 337 1 1883 206 40 72 chr2 210902177 210902685 -42353898 + MLT2B3 LTR ERVL 64 554 0 394 124 9 133 chr2 210902685 210902716 -42353867 - MLT2B1 LTR ERVL -423 92 59 1947 92 62 0 chr2 210902716 210902976 -42353607 - AluSg SINE Alu -16 294 19 394 124 9 133 chr2 210902976 210903048 -42353535 - MLT2B1 LTR ERVL -456 59 2 233 167 83 0 chr2 210903076 210903124 -42353459 + MER96 DNA MER1_type? 103 154 -21 1875 214 28 32 chr2 210903128 210903627 -42352956 - MLT1D LTR MaLR -8 497 1 790 246 21 76 chr2 210903656 210903768 -42352815 + LTR16B LTR ERVL 152 269 -195 6609 13 3 0 chr2 210903768 210904520 -42352063 + L1PA2 LINE L1 5402 6155 0 790 246 21 76 chr2 210904520 210904687 -42351896 + LTR16B LTR ERVL 269 413 -51 1608 174 240 7 chr2 210904687 210905096 -42351487 - MLT1D LTR MaLR -1 504 1 790 246 21 76 chr2 210905096 210905144 -42351439 + LTR16B LTR ERVL 413 462 -2 230 339 139 56 chr2 210905157 210905337 -42351246 + L2 LINE L2 3070 3264 -8 513 260 126 43 chr2 210905533 210905954 -42350629 + LTR33A LTR ERVL 1 519 -4 673 180 8 16 chr2 210906443 210906565 -42350018 + FLAM_A SINE Alu 1 121 -12 1412 147 44 0 chr2 210906682 210906907 -42349676 - AluJb SINE Alu -77 235 1 2252 108 3 0 chr2 210909597 210909894 -42346689 - AluSx SINE Alu -14 298 1 353 205 9 134 chr2 210910214 210910326 -42346257 + MER91A DNA MER1_type 64 161 -35 2430 73 0 0 chr2 210910459 210910760 -42345823 - AluY SINE Alu -10 301 1 30 45 0 0 chr2 210914635 210914679 -42341904 + AT_rich Low_complexity Low_complexity 1 44 0 301 302 56 0 chr2 210915438 210915564 -42341019 - MER5B DNA MER1_type -45 133 1 2250 120 0 0 chr2 210916071 210916380 -42340203 - AluSx SINE Alu -3 309 1 357 275 176 7 chr2 210916478 210916620 -42339963 - MIR3 SINE MIR 0 208 43 308 339 31 46 chr2 210917528 210917723 -42338860 + HAL1 LINE L1 6 197 -2310 2282 200 19 72 chr2 210917813 210918398 -42338185 - MLT2B3 LTR ERVL 0 554 1 476 293 56 68 chr2 210919023 210919289 -42337294 + L2 LINE L2 2283 2545 -769 1873 156 7 3 chr2 210919289 210919577 -42337006 + AluJb SINE Alu 1 289 -23 200 95 48 16 chr2 210919578 210919641 -42336942 + (TA)n Simple_repeat Simple_repeat 2 66 0 238 308 84 0 chr2 210919642 210919749 -42336834 + L2 LINE L2 2533 2648 -666 388 228 33 168 chr2 210919834 210919970 -42336613 + MLT1J LTR MaLR 100 166 -345 2354 113 0 0 chr2 210919970 210920280 -42336303 + AluY SINE Alu 1 310 -1 388 228 33 168 chr2 210920280 210920477 -42336106 + MLT1J LTR MaLR 166 388 -123 1919 228 26 48 chr2 210920597 210920854 -42335729 + L1ME2 LINE L1 2781 3042 -3104 2481 85 13 0 chr2 210920854 210921161 -42335422 + AluSp SINE Alu 1 311 -2 1919 228 26 48 chr2 210921161 210921628 -42334955 + L1ME2 LINE L1 3042 3489 -2657 1068 273 96 35 chr2 210921938 210922029 -42334554 - L1MEc LINE L1 -4793 1603 1519 2392 97 0 0 chr2 210922029 210922329 -42334254 + AluSg SINE Alu 1 300 -10 1068 273 96 35 chr2 210922329 210922987 -42333596 - L1MEc LINE L1 -4877 1519 808 611 217 0 0 chr2 210922994 210923114 -42333469 - FLAM_A SINE Alu -7 135 16 1747 156 14 18 chr2 210923152 210923435 -42333148 - AluJo SINE Alu -30 282 1 1108 289 86 38 chr2 210923435 210924041 -42332542 - L1MEc LINE L1 -5569 827 193 4881 153 23 4 chr2 210924047 210924823 -42331760 - MER54B LTR ERVL 0 793 3 1987 125 66 0 chr2 210924831 210925118 -42331465 - AluSx SINE Alu -6 306 1 2043 209 27 2 chr2 210925181 210925358 -42331225 + L1MD3 LINE L1 7497 7668 -327 185 0 40 0 chr2 210925358 210925383 -42331200 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2043 209 27 2 chr2 210925383 210925692 -42330891 + L1MD3 LINE L1 7668 7995 0 2376 50 0 0 chr2 210925723 210926033 -42330550 + AluY SINE Alu 1 310 0 358 274 112 60 chr2 210926161 210926284 -42330299 + L1ME2 LINE L1 3814 3929 -2217 2141 124 0 0 chr2 210926284 210926590 -42329993 - AluY SINE Alu -5 306 1 358 274 112 60 chr2 210926590 210927054 -42329529 + L1ME2 LINE L1 3929 4432 -1714 236 271 142 28 chr2 210927147 210927365 -42329218 + L1ME2 LINE L1 4573 4815 -1331 1906 153 137 8 chr2 210927415 210927794 -42328789 - MSTA LTR MaLR 0 428 1 834 126 1 8 chr2 210928176 210928334 -42328249 - L1MB2 LINE L1 -2 6169 6029 574 202 0 40 chr2 210928334 210928458 -42328125 + FRAM SINE Alu 1 118 -58 3325 146 50 24 chr2 210928458 210929237 -42327346 - L1MB2 LINE L1 -252 5919 5127 183 274 39 0 chr2 210929530 210929581 -42327002 - L2 LINE L2 -6 3307 3255 23 33 0 0 chr2 210929654 210929684 -42326899 + AT_rich Low_complexity Low_complexity 1 30 0 273 263 263 0 chr2 210929735 210929895 -42326688 - MLT1K LTR MaLR -62 526 325 2046 129 23 0 chr2 210929906 210930209 -42326374 + AluSx SINE Alu 1 310 -2 24 0 0 0 chr2 210930224 210930248 -42326335 + AT_rich Low_complexity Low_complexity 1 24 0 402 294 109 36 chr2 210930377 210930653 -42325930 + L1ME2 LINE L1 4906 5201 -945 436 300 147 9 chr2 210930677 210931024 -42325559 + L1ME2 LINE L1 5258 5652 -2156 386 333 82 13 chr2 210931091 210931250 -42325333 - MIR SINE MIR -89 173 4 252 0 0 0 chr2 210931583 210931611 -42324972 + (A)n Simple_repeat Simple_repeat 1 28 0 3446 132 42 17 chr2 210931951 210932594 -42323989 - L1MD1 LINE L1 0 6242 5584 1746 43 0 0 chr2 210932619 210932829 -42323754 + L1PA3 LINE L1 5943 6152 -3 22 35 0 0 chr2 210932829 210932858 -42323725 + AT_rich Low_complexity Low_complexity 1 29 0 3921 114 21 0 chr2 210932858 210933539 -42323044 + L1PA16 LINE L1 5175 5866 -300 863 224 118 6 chr2 210933536 210933884 -42322699 + L1M4 LINE L1 2714 3100 -3046 * 1282 240 72 15 chr2 210933868 210934326 -42322257 + L1M4 LINE L1 3562 4045 -2101 398 214 0 11 chr2 210934328 210934417 -42322166 + L1ME2 LINE L1 6033 6120 -44 998 321 15 6 chr2 210934451 210934775 -42321808 - HERVL40 LTR ERVL -2371 3159 2833 936 250 82 38 chr2 210934797 210934960 -42321623 - HERVL40 LTR ERVL -3093 2437 2254 1868 102 0 0 chr2 210934960 210935205 -42321378 - AluSg/x SINE Alu 0 312 68 936 250 82 38 chr2 210935205 210935333 -42321250 - HERVL40 LTR ERVL -3276 2254 2133 260 200 0 0 chr2 210935408 210935452 -42321131 + MER7A DNA MER2_type 2 45 -303 302 137 0 0 chr2 210935452 210935503 -42321080 + MSTA LTR MaLR 1 51 -377 310 172 17 0 chr2 210935505 210935563 -42321020 - HERVL40 LTR ERVL -3416 2114 2056 297 181 11 53 chr2 210935560 210935654 -42320929 - HERVL40 LTR ERVL -3922 1608 1519 * 1742 168 48 18 chr2 210935693 210935985 -42320598 - MER7A DNA MER2_type -2695 343 40 1650 138 93 37 chr2 210935985 210936340 -42320243 - THE1C LTR MaLR 0 375 1 1742 168 48 18 chr2 210936340 210936381 -42320202 - MER7A DNA MER2_type -2998 40 2 286 272 43 11 chr2 210936382 210936474 -42320109 - HERVL40 LTR ERVL -4046 1484 1390 437 258 91 84 chr2 210936938 210937213 -42319370 - HERVL40 LTR ERVL -5253 277 1 584 221 53 0 chr2 210937214 210937345 -42319238 - LTR40a LTR ERVL 0 519 382 4448 260 82 41 chr2 210937345 210938897 -42317686 - HERVL40 LTR ERVL -2537 2993 1378 3419 127 45 3 chr2 210938922 210939551 -42317032 + L1MA7 LINE L1 1355 2009 -4780 5567 171 238 31 chr2 210939554 210940343 -42316240 + L1MA7 LINE L1 2767 3391 -3397 2065 144 13 3 chr2 210940343 210940648 -42315935 + AluSx SINE Alu 1 308 -4 5567 171 238 31 chr2 210940648 210940970 -42315613 + L1MA7 LINE L1 3391 3645 -3143 1638 128 158 83 chr2 210940970 210941368 -42315215 - MSTA LTR MaLR 0 428 1 5567 171 238 31 chr2 210941368 210942076 -42314507 + L1MA7 LINE L1 3645 4964 -1824 15053 215 27 19 chr2 210942089 210945974 -42310609 + L1PA15 LINE L1 1 4435 -2381 2223 113 3 0 chr2 210945974 210946267 -42310316 + AluSx SINE Alu 1 294 -18 15053 215 27 19 chr2 210946267 210948668 -42307915 + L1PA15 LINE L1 4435 6816 0 4842 164 21 11 chr2 210948649 210950180 -42306403 + L1MA7 LINE L1 4930 6476 -457 * 2516 58 3 10 chr2 210950683 210950996 -42305587 - AluY SINE Alu 0 311 1 1373 277 77 134 chr2 210951149 210952618 -42303965 - L2 LINE L2 -66 3247 1862 325 271 139 84 chr2 210953168 210953441 -42303142 + MLT1H1-int LTR MaLR 1059 1712 -23 474 242 108 71 chr2 210953454 210953694 -42302889 + MLT1H1 LTR MaLR 6 254 -288 432 0 0 0 chr2 210953778 210953826 -42302757 + (TCTA)n Simple_repeat Simple_repeat 3 50 0 690 237 104 29 chr2 210953882 210954128 -42302455 + MLT1H1 LTR MaLR 230 548 -7 329 283 29 51 chr2 210954228 210954366 -42302217 + L1ME4a LINE L1 5258 5392 -729 310 214 0 0 chr2 210954392 210954448 -42302135 + L1ME4a LINE L1 5524 5579 -542 392 231 206 12 chr2 210954528 210954849 -42301734 + L1ME4a LINE L1 5737 6119 -2 254 389 94 7 chr2 210954914 210955063 -42301520 - MIR3 SINE MIR -28 180 19 23 54 0 0 chr2 210955495 210955532 -42301051 + AT_rich Low_complexity Low_complexity 1 37 0 2178 129 52 0 chr2 210957755 210958119 -42298464 - L1MB1 LINE L1 0 6168 5786 1773 138 0 0 chr2 210958131 210958399 -42298184 + Tigger1 DNA MER2_type 26 293 -2125 6386 75 9 1 chr2 210958411 210959273 -42297310 - L1PA13 LINE L1 -8 6155 5287 315 91 11 125 chr2 210959273 210959361 -42297222 - L1PA13 LINE L1 -835 5331 5254 12894 111 15 3 chr2 210959368 210961267 -42295316 + Tigger1 DNA MER2_type 279 2200 -218 432 0 0 0 chr2 210961269 210961317 -42295266 + (TA)n Simple_repeat Simple_repeat 1 48 0 2118 106 0 0 chr2 210961360 210961633 -42294950 - AluSx SINE Alu -39 273 1 794 194 6 40 chr2 210961639 210961814 -42294769 - AluJo SINE Alu -24 288 120 805 166 112 12 chr2 210961814 210961983 -42294600 + Tigger1 DNA MER2_type 2233 2418 0 5757 174 29 11 chr2 210961983 210963546 -42293037 - L1MB1 LINE L1 -383 5785 4198 4358 47 0 0 chr2 210963598 210964130 -42292453 - L1PA5 LINE L1 -2 6152 5621 180 0 0 0 chr2 210964281 210964301 -42292282 + (CA)n Simple_repeat Simple_repeat 1 20 0 1859 153 0 41 chr2 210964440 210964735 -42291848 + AluJb SINE Alu 1 283 -29 30 0 0 0 chr2 210964736 210964766 -42291817 + AT_rich Low_complexity Low_complexity 1 30 0 2182 103 0 3 chr2 210964782 210965074 -42291509 - AluSg SINE Alu -19 291 1 285 29 0 0 chr2 210965367 210965401 -42291182 + (A)n Simple_repeat Simple_repeat 1 34 0 4387 180 20 8 chr2 210966117 210967039 -42289544 + L1MB8 LINE L1 5236 6166 -12 1809 164 31 60 chr2 210967730 210967792 -42288791 - MLT1A2 LTR MaLR -1 373 311 1169 48 0 0 chr2 210967792 210967938 -42288645 - L1PA6 LINE L1 -4 6150 6005 1809 164 31 60 chr2 210967938 210968259 -42288324 - MLT1A2 LTR MaLR -63 311 1 476 283 7 0 chr2 210968390 210968535 -42288048 + L1M4 LINE L1 3602 3747 -2399 29 28 0 0 chr2 210969054 210969090 -42287493 + AT_rich Low_complexity Low_complexity 1 36 0 1367 132 47 19 chr2 210970780 210971038 -42285545 + Tigger2 DNA MER2_type 1 265 -2453 3478 125 48 81 chr2 210971113 210971442 -42285141 + Tigger2 DNA MER2_type 198 536 -2182 1673 78 0 14 chr2 210971442 210971661 -42284922 + AluSp SINE Alu 83 298 -15 3478 125 48 81 chr2 210971661 210971717 -42284866 + Tigger2 DNA MER2_type 536 592 -2126 1503 159 71 17 chr2 210971717 210972012 -42284571 - AluJb SINE Alu -1 311 1 3478 125 48 81 chr2 210972012 210972305 -42284278 + Tigger2 DNA MER2_type 592 855 -1863 872 177 30 18 chr2 210972298 210972462 -42284121 + Tigger2 DNA MER2_type 2542 2707 -11 * 2059 138 0 0 chr2 210974970 210975260 -42281323 + AluSx SINE Alu 1 290 -22 2439 67 3 0 chr2 210975965 210976265 -42280318 + AluY SINE Alu 1 301 -10 2099 119 0 17 chr2 210976294 210976624 -42279959 + AluSx SINE Alu 13 312 0 10139 198 48 12 chr2 210978039 210979883 -42276700 + L1M2c LINE L1 6 1931 -4858 1921 133 18 0 chr2 210979883 210980233 -42276350 + AluSx SINE Alu 1 355 0 10139 198 48 12 chr2 210980233 210980406 -42276177 + L1M2c LINE L1 1931 2096 -4693 1019 219 50 17 chr2 210980410 210980525 -42276058 + MLT1E3 LTR MaLR 379 489 -135 2338 89 0 0 chr2 210980525 210980818 -42275765 - AluSg SINE Alu -17 293 1 1019 219 50 17 chr2 210980818 210980940 -42275643 + MLT1E3 LTR MaLR 489 624 0 21 0 0 0 chr2 210981089 210981110 -42275473 + AT_rich Low_complexity Low_complexity 1 21 0 2277 118 0 6 chr2 210981327 210981641 -42274942 + AluSx SINE Alu 1 312 0 332 306 156 38 chr2 210981650 210981836 -42274747 + L2 LINE L2 2736 2943 -371 2403 76 0 0 chr2 210981922 210982224 -42274359 - AluY SINE Alu -9 302 1 246 32 0 0 chr2 210982240 210982271 -42274312 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 6353 55 41 36 chr2 210982271 210983202 -42273381 - SVA Other Other -19 1367 433 608 43 0 11 chr2 210983218 210983310 -42273273 - SVA Other Other -520 866 776 348 232 0 14 chr2 210983815 210983884 -42272699 - MER96 DNA MER1_type? -107 68 1 226 296 0 49 chr2 210983971 210984052 -42272531 + L1MEd LINE L1 553 629 -5490 391 263 101 33 chr2 210984103 210984252 -42272331 + L1MEd LINE L1 704 841 -5278 1636 208 25 14 chr2 210984252 210984613 -42271970 + MLT1A1 LTR MaLR 1 365 0 391 263 101 33 chr2 210984613 210984858 -42271725 + L1MEd LINE L1 841 1050 -5069 1553 144 11 53 chr2 210984952 210985236 -42271347 + AluJo SINE Alu 27 298 -14 189 0 0 0 chr2 210985443 210985464 -42271119 + (T)n Simple_repeat Simple_repeat 1 21 0 4960 36 5 0 chr2 210985945 210986547 -42270036 - L1PA5 LINE L1 0 6154 5550 24 32 0 0 chr2 210986547 210986578 -42270005 + AT_rich Low_complexity Low_complexity 1 31 0 701 300 26 17 chr2 210986584 210986817 -42269766 - MIR SINE MIR -27 235 1 344 272 56 72 chr2 210986826 210987006 -42269577 + L2 LINE L2 2324 2500 -814 1729 205 53 69 chr2 210987077 210987569 -42269014 - MLT2B1 LTR ERVL 0 520 37 13264 165 24 14 chr2 210987572 210989638 -42266945 - ERVL LTR ERVL -2545 3219 1127 1716 161 45 3 chr2 210989638 210989930 -42266653 + AluJb SINE Alu 1 304 -8 13264 165 24 14 chr2 210989930 210990088 -42266495 - ERVL LTR ERVL -4637 1127 972 22 0 0 0 chr2 210990173 210990195 -42266388 + AT_rich Low_complexity Low_complexity 1 22 0 677 244 169 14 chr2 210990195 210990408 -42266175 - MIR SINE MIR -3 259 14 285 318 72 118 chr2 210990411 210990895 -42265688 + L2 LINE L2 2811 3272 0 232 236 45 101 chr2 210990931 210991020 -42265563 + L1ME LINE L1 5440 5523 -598 461 253 178 15 chr2 210991925 210992127 -42264456 - MIR SINE MIR -7 255 21 324 194 222 0 chr2 210992843 210992951 -42263632 + L1ME LINE L1 5536 5667 -454 535 188 143 0 chr2 210993169 210993281 -42263302 - FLAM_A SINE Alu -5 128 1 2237 120 0 0 chr2 210993393 210993694 -42262889 - AluSx SINE Alu -11 301 1 22 0 0 0 chr2 210993835 210993857 -42262726 + AT_rich Low_complexity Low_complexity 1 22 0 201 303 0 15 chr2 210994292 210994358 -42262225 + (CATA)n Simple_repeat Simple_repeat 4 68 0 275 191 16 0 chr2 210994773 210994836 -42261747 + GA-rich Low_complexity Low_complexity 2 65 0 26 0 0 0 chr2 210995068 210995094 -42261489 + AT_rich Low_complexity Low_complexity 1 26 0 3767 119 2 2 chr2 210995130 210995657 -42260926 + MER1A DNA MER1_type 1 527 0 3778 143 60 22 chr2 210995882 210996562 -42260021 + LTR62 LTR ERVK 1 706 -13 1773 138 6 22 chr2 210996741 210997052 -42259531 + MER46B DNA MER2_type 54 234 -2 3437 143 75 16 chr2 210997053 210997746 -42258837 + L1MA7 LINE L1 5557 6290 -1 244 263 61 18 chr2 210998094 210998208 -42258375 - L1MEc LINE L1 -4452 1944 1826 568 188 0 0 chr2 210998209 210998326 -42258257 - L1MEc LINE L1 -5134 1071 955 861 249 101 107 chr2 210998724 210998984 -42257599 - L1MC4 LINE L1 -91 7951 7691 1829 138 0 36 chr2 210998984 210999169 -42257414 - AluJb SINE Alu -19 293 122 181 29 59 29 chr2 210999169 210999203 -42257380 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 1829 138 0 36 chr2 210999203 210999321 -42257262 - AluJb SINE Alu -190 122 1 861 249 101 107 chr2 210999321 210999578 -42257005 - L1MC4 LINE L1 -351 7691 7434 1976 138 23 3 chr2 210999578 210999883 -42256700 - AluJo SINE Alu -1 311 1 861 249 101 107 chr2 210999883 211000446 -42256137 - L1MC4 LINE L1 -608 7434 6877 904 253 4 31 chr2 211000501 211000730 -42255853 + L1ME LINE L1 298 520 -5550 535 129 0 0 chr2 211000767 211000860 -42255723 + L1MA8 LINE L1 6193 6285 -6 1393 183 0 0 chr2 211000861 211001096 -42255487 + AluSx SINE Alu 1 235 -77 336 213 43 64 chr2 211001171 211001265 -42255318 - L1MC4 LINE L1 -1341 6701 6610 312 273 23 0 chr2 211001231 211001319 -42255264 + L1MC4 LINE L1 6614 6703 -1339 * 2163 85 4 0 chr2 211001354 211001625 -42254958 - AluSp SINE Alu -21 292 21 330 361 76 34 chr2 211002713 211003068 -42253515 + L1MEd LINE L1 87 456 -5749 233 186 17 0 chr2 211003230 211003289 -42253294 + L1MB4 LINE L1 6120 6179 -1 866 284 91 103 chr2 211003301 211003770 -42252813 + L1MEd LINE L1 604 1077 -5319 1800 148 0 4 chr2 211003770 211004034 -42252549 + AluJb SINE Alu 27 289 -23 866 284 91 103 chr2 211004034 211004240 -42252343 + L1MEd LINE L1 1077 1284 -5112 2325 82 0 0 chr2 211004240 211004549 -42252034 + AluSg SINE Alu 1 309 0 866 284 91 103 chr2 211004549 211004854 -42251729 + L1MEd LINE L1 1284 1635 -4761 2195 36 18 4 chr2 211004854 211005129 -42251454 + L1PA7 LINE L1 5876 6154 0 866 284 91 103 chr2 211005129 211005316 -42251267 + L1MEd LINE L1 1635 1823 -4573 382 123 62 0 chr2 211005583 211005648 -42250935 + Tigger2 DNA MER2_type 1 69 -2649 * 2243 140 73 9 chr2 211005635 211006057 -42250526 + Tigger2 DNA MER2_type 2270 2718 0 387 282 9 0 chr2 211006088 211006198 -42250385 + L1MEd LINE L1 2154 2264 -4132 209 194 0 32 chr2 211006682 211006744 -42249839 + CT-rich Low_complexity Low_complexity 2 61 0 1485 289 78 19 chr2 211006752 211007510 -42249073 - L1ME LINE L1 -4312 2084 1282 10542 138 8 58 chr2 211007514 211009704 -42246879 + L1PA13 LINE L1 3270 5351 -795 * 36146 31 26 3 chr2 211009699 211014920 -42241663 - L1PA3 LINE L1 0 6155 824 2638 23 7 0 chr2 211014920 211015225 -42241358 - AluY SINE Alu -4 307 1 36146 31 26 3 chr2 211015225 211015484 -42241099 - L1PA3 LINE L1 -5331 824 572 5635 79 16 12 chr2 211015487 211016322 -42240261 + L1PA13 LINE L1 5324 6161 -2 534 273 86 31 chr2 211016324 211016839 -42239744 - L1ME LINE L1 -5066 1139 658 381 350 7 32 chr2 211017243 211017526 -42239057 - L1ME LINE L1 -6085 311 36 1802 168 3 25 chr2 211017826 211018142 -42238441 - AluJo SINE Alu -3 309 1 1517 214 84 30 chr2 211018180 211018333 -42238250 + MER74B LTR ERVL 78 221 -401 1992 133 28 0 chr2 211018333 211018618 -42237965 - AluSx SINE Alu -19 293 1 1517 214 84 30 chr2 211018618 211018926 -42237657 + MER74B LTR ERVL 221 564 -58 566 258 78 64 chr2 211019009 211019459 -42237124 - HAL1 LINE L1 -110 2397 1942 4770 48 0 0 chr2 211019756 211020336 -42236247 + L1PA6 LINE L1 5575 6154 0 2179 125 7 0 chr2 211020490 211020787 -42235796 - AluSx SINE Alu -13 299 1 497 262 0 16 chr2 211020889 211021011 -42235572 + MIR SINE MIR 32 151 -111 387 0 0 0 chr2 211021011 211021054 -42235529 + (TG)n Simple_repeat Simple_repeat 1 43 0 404 285 16 8 chr2 211022378 211022501 -42234082 + MLT1H1 LTR MaLR 8 131 -424 515 180 41 0 chr2 211022502 211022624 -42233959 + MER96B DNA MER1_type? 2 128 -289 522 279 142 4 chr2 211022684 211022917 -42233666 + MLT1H1 LTR MaLR 291 555 0 326 23 23 0 chr2 211023864 211023907 -42232676 + (TG)n Simple_repeat Simple_repeat 1 44 0 418 270 22 96 chr2 211023976 211024154 -42232429 - MER5A DNA MER1_type -6 183 19 438 196 0 0 chr2 211024793 211024885 -42231698 + (CA)n Simple_repeat Simple_repeat 2 93 0 539 289 75 65 chr2 211025832 211026354 -42230229 + HAL1b LINE L1 159 689 -659 2277 117 0 0 chr2 211026354 211026653 -42229930 + AluSx SINE Alu 1 299 -13 539 289 75 65 chr2 211026653 211026701 -42229882 + HAL1b LINE L1 689 735 -613 * 1040 158 21 1 chr2 211026698 211026922 -42229661 + L1M2 LINE L1 2697 2926 -3922 556 293 18 6 chr2 211026939 211027103 -42229480 + MIR SINE MIR 35 200 -62 1403 163 61 50 chr2 211027107 211027384 -42229199 + AluJo SINE Alu 1 280 -32 789 187 14 3 chr2 211027468 211027751 -42228832 + MLT1B LTR MaLR 2 381 -9 183 250 77 0 chr2 211027803 211027855 -42228728 - L2 LINE L2 -3 3269 3214 835 207 7 7 chr2 211027904 211028049 -42228534 - FRAM SINE Alu -31 145 1 265 221 39 0 chr2 211028049 211028126 -42228457 + MER96B DNA MER1_type? 39 118 -299 2006 171 0 0 chr2 211028273 211028583 -42228000 + AluJb SINE Alu 2 311 -1 8807 188 33 19 chr2 211028614 211029910 -42226673 + L1M2 LINE L1 2879 4217 -2631 2432 66 0 13 chr2 211029910 211030211 -42226372 + AluY SINE Alu 1 297 -14 8807 188 33 19 chr2 211030211 211031023 -42225560 + L1M2 LINE L1 4217 5016 -1832 1197 226 46 3 chr2 211031019 211031409 -42225174 + L1 LINE L1 2797 3203 -2943 * 396 269 83 14 chr2 211031824 211031969 -42224614 - MIR SINE MIR -27 235 81 2179 111 3 19 chr2 211032030 211032337 -42224246 + AluSx SINE Alu 1 302 -10 38963 66 5 2 chr2 211032337 211038459 -42218124 + L1PA6 LINE L1 10 6154 0 263 248 147 18 chr2 211039254 211039363 -42217220 + L2 LINE L2 2259 2381 -933 2111 90 48 0 chr2 211039583 211039894 -42216689 + L1PA15 LINE L1 5832 6157 -8 2584 127 39 11 chr2 211040166 211040599 -42215984 - MER65A LTR ERV1 0 445 1 1315 165 168 28 chr2 211040955 211041395 -42215188 + L1MD2 LINE L1 5473 5961 -209 1873 224 132 21 chr2 211041995 211042554 -42214029 - MLT1E2 LTR MaLR -5 621 1 268 236 0 0 chr2 211043313 211043368 -42213215 - MER5B DNA MER1_type -122 56 2 21 0 0 0 chr2 211043492 211043513 -42213070 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr2 211044251 211044280 -42212303 + AT_rich Low_complexity Low_complexity 1 29 0 235 274 179 0 chr2 211044453 211044537 -42212046 - MIR SINE MIR -30 232 134 21 0 0 0 chr2 211044765 211044786 -42211797 + AT_rich Low_complexity Low_complexity 1 21 0 2470 69 3 0 chr2 211044819 211045124 -42211459 + AluY SINE Alu 1 306 -5 216 0 0 0 chr2 211046272 211046296 -42210287 + (A)n Simple_repeat Simple_repeat 1 24 0 2081 122 7 0 chr2 211046537 211046831 -42209752 + AluSx SINE Alu 1 296 -16 195 243 0 0 chr2 211047403 211047440 -42209143 - MIR SINE MIR -150 112 76 22 0 0 0 chr2 211047727 211047749 -42208834 + AT_rich Low_complexity Low_complexity 1 22 0 1841 209 43 9 chr2 211048220 211048666 -42207917 + MLT1C LTR MaLR 7 467 0 388 99 16 215 chr2 211048670 211048791 -42207792 + MLT1-int LTR MaLR 1210 1306 -65 23 0 0 0 chr2 211049852 211049875 -42206708 + AT_rich Low_complexity Low_complexity 1 23 0 387 277 67 17 chr2 211050477 211050596 -42205987 + MIR3 SINE MIR 9 133 -75 1225 212 91 21 chr2 211050792 211051131 -42205452 + MLT1A2 LTR MaLR 1 363 -11 271 244 0 24 chr2 211051369 211051451 -42205132 - L1ME4a LINE L1 -85 6036 5957 629 284 13 4 chr2 211051497 211051726 -42204857 - L1ME4a LINE L1 -257 5864 5634 545 291 50 22 chr2 211052030 211052209 -42204374 + MIR3 SINE MIR 20 203 -5 1579 96 36 25 chr2 211052217 211052541 -42204042 + THE1C LTR MaLR 1 375 0 22 0 0 0 chr2 211053296 211053318 -42203265 + AT_rich Low_complexity Low_complexity 1 22 0 2474 198 53 31 chr2 211053403 211053953 -42202630 - MER68 LTR ERV1 0 562 1 24 0 0 0 chr2 211054652 211054676 -42201907 + AT_rich Low_complexity Low_complexity 1 24 0 701 249 102 35 chr2 211054756 211054925 -42201658 - L1ME4a LINE L1 -3 6118 5962 2054 196 41 37 chr2 211054925 211055217 -42201366 + MLT1C LTR MaLR 2 298 -169 2257 101 3 3 chr2 211055217 211055515 -42201068 + AluSq SINE Alu 1 298 -15 2054 196 41 37 chr2 211055515 211055686 -42200897 + MLT1C LTR MaLR 298 467 0 701 249 102 35 chr2 211055686 211055917 -42200666 - L1ME4a LINE L1 -159 5962 5691 225 316 103 26 chr2 211055971 211056088 -42200495 - L1ME4a LINE L1 -570 5551 5426 188 196 65 0 chr2 211056095 211056141 -42200442 + MIR SINE MIR 214 262 0 738 285 103 36 chr2 211057177 211057201 -42199382 + L1MC4a LINE L1 5346 5367 -2441 2261 112 0 3 chr2 211057201 211057506 -42199077 + AluSx SINE Alu 3 306 -6 738 285 103 36 chr2 211057506 211057948 -42198635 + L1MC4a LINE L1 5367 5843 -1965 181 360 11 11 chr2 211058056 211058145 -42198438 - L2 LINE L2 -822 2492 2404 539 298 13 7 chr2 211059043 211059194 -42197389 + MLT1I LTR MaLR 68 219 -190 2259 116 0 0 chr2 211059251 211059553 -42197030 + AluSx SINE Alu 1 302 -10 376 213 63 7 chr2 211059623 211059715 -42196868 + MLT1I LTR MaLR 324 405 -4 2203 115 0 0 chr2 211060734 211061029 -42195554 - AluSx SINE Alu -17 295 1 410 260 8 41 chr2 211061233 211061356 -42195227 - L2 LINE L2 -41 3272 3154 231 194 37 46 chr2 211061356 211061464 -42195119 + (TA)n Simple_repeat Simple_repeat 1 107 0 283 278 182 64 chr2 211061490 211061837 -42194746 - L2 LINE L2 -224 3089 2634 562 227 90 57 chr2 211063772 211064078 -42192505 - LTR45 LTR ERV1 0 592 305 231 36 0 0 chr2 211064172 211064200 -42192383 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 24 53 0 0 chr2 211064792 211064830 -42191753 + AT_rich Low_complexity Low_complexity 1 38 0 1033 167 12 0 chr2 211065395 211065563 -42191020 - AluJb SINE Alu -17 295 126 572 170 38 28 chr2 211066453 211066559 -42190024 + U6 snRNA snRNA 1 107 0 654 104 60 75 chr2 211066559 211066693 -42189890 + L1MB2 LINE L1 6030 6161 -10 501 208 59 0 chr2 211066721 211066822 -42189761 + L1ME3 LINE L1 6049 6155 -7 24 0 0 0 chr2 211067250 211067274 -42189309 + AT_rich Low_complexity Low_complexity 1 24 0 1100 169 0 0 chr2 211067587 211067759 -42188824 - AluJb SINE Alu -6 306 135 195 42 0 0 chr2 211067759 211067783 -42188800 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1719 161 22 0 chr2 211067784 211068051 -42188532 - AluSx SINE Alu -36 276 4 1993 140 0 26 chr2 211068513 211068811 -42187772 + AluSx SINE Alu 1 292 -20 243 79 0 0 chr2 211068811 211068849 -42187734 + (CA)n Simple_repeat Simple_repeat 2 39 0 264 321 126 19 chr2 211070270 211070429 -42186154 - MIR SINE MIR -52 210 35 427 300 10 0 chr2 211070698 211070798 -42185785 - L2 LINE L2 0 3272 3172 2245 119 3 0 chr2 211071409 211071720 -42184863 + AluSx SINE Alu 1 312 0 2086 121 0 0 chr2 211071914 211072220 -42184363 + AluSx SINE Alu 1 306 0 2221 116 3 0 chr2 211073719 211074013 -42182570 - AluSx SINE Alu -17 295 1 1470 35 0 12 chr2 211074201 211074372 -42182211 + L1PA4 LINE L1 5986 6154 -1 934 217 11 6 chr2 211075113 211075288 -42181295 + MER45A DNA AcHobo 1 176 -2 1075 259 118 16 chr2 211076294 211076939 -42179644 - L2 LINE L2 -27 3286 2564 1005 184 143 0 chr2 211077113 211077330 -42179253 - L1MC4 LINE L1 -1304 6738 6491 235 180 20 0 chr2 211077713 211077763 -42178820 + MER5B DNA MER1_type 125 175 -3 1911 99 30 0 chr2 211078664 211078926 -42177657 - AluSq SINE Alu -43 270 1 2137 119 0 3 chr2 211079288 211079574 -42177009 + AluSx SINE Alu 1 285 -27 2210 118 3 0 chr2 211080661 211080958 -42175625 - AluSx SINE Alu -14 298 1 603 226 231 29 chr2 211081352 211081560 -42175023 - MIR SINE MIR 0 262 13 661 176 44 49 chr2 211081788 211081993 -42174590 - MER20B DNA MER1_type -1 782 579 1829 123 12 0 chr2 211082006 211082258 -42174325 + AluSx SINE Alu 48 302 -10 399 223 39 10 chr2 211083020 211083123 -42173460 - MER20B DNA MER1_type -677 106 1 1488 189 0 4 chr2 211083205 211083470 -42173113 + AluJo SINE Alu 35 298 -14 1061 146 11 34 chr2 211083470 211083648 -42172935 + AluJo/FRAM SINE Alu 134 307 -5 632 232 146 89 chr2 211084411 211084801 -42171782 + L1MC4a LINE L1 5566 5999 -1809 2484 56 0 16 chr2 211084801 211085107 -42171476 - AluY SINE Alu -10 301 1 632 232 146 89 chr2 211085107 211085286 -42171297 + L1MC4a LINE L1 5999 6167 -1641 22 0 0 0 chr2 211085700 211085722 -42170861 + AT_rich Low_complexity Low_complexity 1 22 0 2167 123 0 9 chr2 211086176 211086492 -42170091 + AluSq SINE Alu 1 313 0 416 223 201 0 chr2 211086711 211086850 -42169733 + MIR SINE MIR 92 258 -4 253 263 126 21 chr2 211087195 211087290 -42169293 + L2 LINE L2 3201 3305 -8 254 312 26 0 chr2 211087348 211087425 -42169158 + L2 LINE L2 3193 3271 -1 811 178 61 12 chr2 211087996 211088159 -42168424 + MLT1B LTR MaLR 5 175 -215 427 81 58 0 chr2 211088176 211088262 -42168321 + CT-rich Low_complexity Low_complexity 2 92 0 1086 174 11 5 chr2 211088269 211088459 -42168124 + MLT1B LTR MaLR 192 382 -8 306 0 0 0 chr2 211088826 211088860 -42167723 + (TG)n Simple_repeat Simple_repeat 1 34 0 277 293 104 9 chr2 211089027 211089133 -42167450 + MIR SINE MIR 103 218 -44 198 191 0 0 chr2 211089851 211089893 -42166690 + GA-rich Low_complexity Low_complexity 3 44 0 4617 96 0 8 chr2 211090496 211091112 -42165471 + L1PA7 LINE L1 2 612 -5849 13236 89 23 7 chr2 211091112 211093320 -42163263 + L1PA7 LINE L1 2426 6469 0 3809 152 85 22 chr2 211094252 211094936 -42161647 + LTR8A LTR ERV1 1 727 0 413 244 0 0 chr2 211095667 211095757 -42160826 + MER5A DNA MER1_type 21 110 -79 338 261 109 51 chr2 211095819 211095957 -42160626 - MER5A DNA MER1_type -7 182 37 * 371 264 36 43 chr2 211095836 211095976 -42160607 + MER5A DNA MER1_type 45 183 -6 325 276 69 0 chr2 211095982 211096069 -42160514 - MIR3 SINE MIR -48 160 68 285 281 219 7 chr2 211096098 211096244 -42160339 + MIR SINE MIR 26 202 -60 2191 113 3 0 chr2 211096355 211096648 -42159935 + AluSx SINE Alu 1 294 -18 205 192 0 19 chr2 211096876 211096928 -42159655 + CT-rich Low_complexity Low_complexity 2 52 0 351 280 21 56 chr2 211097396 211097539 -42159044 + MER5A DNA MER1_type 45 182 -7 849 217 242 3 chr2 211097940 211098258 -42158325 + L2 LINE L2 38 431 -2883 460 235 212 0 chr2 211098258 211098428 -42158155 + MER63 DNA MER1_type 1 1684 -4 3810 246 228 8 chr2 211098435 211099889 -42156694 + L2 LINE L2 427 2200 -1114 2422 150 3 6 chr2 211099958 211100324 -42156259 - MLT1A1 LTR MaLR 0 365 1 21 36 0 0 chr2 211102757 211102785 -42153798 + AT_rich Low_complexity Low_complexity 1 28 0 304 254 23 62 chr2 211102791 211102921 -42153662 - L1ME LINE L1 -600 5566 5442 2011 160 0 10 chr2 211103204 211103517 -42153066 + AluSx SINE Alu 1 310 -2 1874 168 3 0 chr2 211103675 211103973 -42152610 + AluJo SINE Alu 1 299 -13 480 221 133 38 chr2 211104097 211104255 -42152328 + MIR SINE MIR 20 192 -70 2510 65 10 0 chr2 211104407 211104715 -42151868 + AluY SINE Alu 1 311 0 623 183 61 8 chr2 211105904 211106035 -42150548 - MIR SINE MIR -34 228 91 21 0 0 0 chr2 211107130 211107151 -42149432 + AT_rich Low_complexity Low_complexity 1 21 0 2415 240 40 39 chr2 211107944 211108340 -42148243 - L2 LINE L2 0 3313 2919 1904 134 25 38 chr2 211108340 211108654 -42147929 - AluSx SINE Alu -2 310 1 2415 240 40 39 chr2 211108654 211108783 -42147800 - L2 LINE L2 -394 2919 2792 1923 161 10 0 chr2 211108783 211109088 -42147495 + AluSx SINE Alu 1 308 -4 2415 240 40 39 chr2 211109088 211109655 -42146928 - L2 LINE L2 -521 2792 2220 2100 147 0 3 chr2 211111243 211111556 -42145027 - AluSx SINE Alu 0 312 1 1325 189 48 16 chr2 211111939 211111999 -42144584 + MLT1A1 LTR MaLR 1 58 -307 2303 107 0 0 chr2 211111999 211112299 -42144284 + AluSx SINE Alu 1 300 -12 1325 189 48 16 chr2 211112299 211112550 -42144033 + MLT1A1 LTR MaLR 58 322 -43 223 377 69 6 chr2 211112874 211113049 -42143534 + MIR SINE MIR 25 210 -52 190 254 119 0 chr2 211113826 211113893 -42142690 - L2 LINE L2 -41 3231 3157 1789 174 23 16 chr2 211114346 211114651 -42141932 - AluJo SINE Alu -5 307 1 777 217 29 99 chr2 211114741 211115086 -42141497 - MLT1J LTR MaLR -8 503 183 505 253 30 48 chr2 211115076 211115242 -42141341 + MER20B DNA MER1_type 153 315 -468 * 464 196 20 0 chr2 211115241 211115343 -42141240 - LTR16C LTR ERVL -93 398 295 * 302 221 0 0 chr2 211115664 211115732 -42140851 + MER20B DNA MER1_type 716 783 0 1235 192 50 36 chr2 211116669 211117033 -42139550 + MLT1A2 LTR MaLR 6 374 0 260 304 43 22 chr2 211117200 211117292 -42139291 + L2 LINE L2 3209 3302 -11 304 250 0 14 chr2 211117496 211117568 -42139015 - MIR3 SINE MIR -30 178 108 347 306 101 42 chr2 211122154 211122461 -42134122 - L1ME LINE L1 -459 5662 5338 2286 106 0 0 chr2 211122571 211122864 -42133719 + AluSx SINE Alu 1 293 -19 385 294 105 49 chr2 211123051 211123357 -42133226 - L1ME LINE L1 -1214 4932 4610 1199 131 0 6 chr2 211125525 211125700 -42130883 + AluSg/x SINE Alu 120 293 -16 2129 145 0 0 chr2 211125841 211126144 -42130439 + AluSx SINE Alu 1 303 -9 219 111 62 12 chr2 211126273 211126354 -42130229 + (TA)n Simple_repeat Simple_repeat 2 86 0 1760 173 7 3 chr2 211127171 211127466 -42129117 - AluJo SINE Alu -16 296 1 187 219 49 0 chr2 211127481 211127522 -42129061 - MIR SINE MIR -55 153 111 1004 198 0 5 chr2 211128140 211128337 -42128246 - L1PB4 LINE L1 -3 6153 5958 1115 241 73 24 chr2 211128876 211129216 -42127367 + L2 LINE L2 2956 3312 -1 824 158 0 15 chr2 211130053 211130186 -42126397 + FLAM_A SINE Alu 1 131 -2 286 233 39 19 chr2 211132455 211132558 -42124025 + GA-rich Low_complexity Low_complexity 2 106 0 1957 216 119 41 chr2 211132569 211132861 -42123722 - L1MDa LINE L1 -4672 1868 1600 2101 101 50 0 chr2 211132861 211133159 -42123424 - AluSq SINE Alu 0 313 1 1957 216 119 41 chr2 211133159 211133670 -42122913 - L1MDa LINE L1 -4940 1600 1002 287 173 0 0 chr2 211133685 211133737 -42122846 + MER68 LTR ERV1 5 56 -506 861 155 0 34 chr2 211133737 211133885 -42122698 + FLAM_C SINE Alu 1 143 0 1571 245 65 30 chr2 211133885 211134378 -42122205 + MER68 LTR ERV1 53 562 0 228 204 0 0 chr2 211134398 211134447 -42122136 - L1MDa LINE L1 -5569 974 926 400 357 41 45 chr2 211134989 211135303 -42121280 - L1MDa LINE L1 -6209 331 19 2319 94 0 28 chr2 211135863 211135999 -42120584 + AluSx SINE Alu 1 139 -173 2333 105 3 0 chr2 211135999 211136303 -42120280 + AluSx SINE Alu 1 305 -7 2319 94 0 28 chr2 211136303 211136486 -42120097 + AluSx SINE Alu 139 311 -1 21 0 0 0 chr2 211136646 211136667 -42119916 + AT_rich Low_complexity Low_complexity 1 21 0 2109 115 0 45 chr2 211136920 211137234 -42119349 + AluSx SINE Alu 1 300 -12 2054 128 16 0 chr2 211137399 211137705 -42118878 + AluJo SINE Alu 1 311 -1 2266 98 0 3 chr2 211138003 211138298 -42118285 - AluSx SINE Alu -18 294 1 7011 200 102 18 chr2 211138429 211138900 -42117683 + L1MB7 LINE L1 2880 3310 -2874 896 171 139 81 chr2 211138900 211139046 -42117537 + MLT1A1 LTR MaLR 1 137 -228 2295 107 3 0 chr2 211139046 211139355 -42117228 + AluSg SINE Alu 1 310 0 896 171 139 81 chr2 211139355 211139553 -42117030 + MLT1A1 LTR MaLR 137 365 0 7011 200 102 18 chr2 211139553 211140158 -42116425 + L1MB7 LINE L1 3310 3863 -2321 1897 133 0 37 chr2 211140158 211140452 -42116131 + AluJo SINE Alu 1 283 -29 300 27 0 0 chr2 211140452 211140489 -42116094 + (CA)n Simple_repeat Simple_repeat 2 38 0 7011 200 102 18 chr2 211140489 211141410 -42115173 + L1MB7 LINE L1 3863 4706 -1478 2253 86 0 0 chr2 211141410 211141688 -42114895 - AluY SINE Alu -21 290 13 7011 200 102 18 chr2 211141688 211142705 -42113878 + L1MB7 LINE L1 4706 6154 -30 1994 149 17 3 chr2 211143572 211143873 -42112710 + AluSx SINE Alu 1 305 -7 2535 60 0 0 chr2 211144569 211144867 -42111716 + AluY SINE Alu 1 298 -13 346 259 80 80 chr2 211145427 211145589 -42110994 + MIR3 SINE MIR 34 195 -13 2308 58 10 0 chr2 211147841 211148132 -42108451 - L1PA5 LINE L1 -8 6146 5853 3791 190 115 22 chr2 211149196 211149340 -42107243 - Charlie1a DNA MER1_type -1306 1455 1326 2484 47 3 3 chr2 211149340 211149641 -42106942 + AluY SINE Alu 5 305 -6 3791 190 115 22 chr2 211149641 211150510 -42106073 - Charlie1a DNA MER1_type -1435 1326 347 1578 160 26 0 chr2 211150511 211150779 -42105804 - Charlie1a DNA MER1_type -1174 281 7 285 294 0 15 chr2 211150913 211150981 -42105602 - L2 LINE L2 -1 3271 3205 624 204 98 71 chr2 211151080 211151335 -42105248 + MIR SINE MIR 1 262 0 240 296 40 80 chr2 211151384 211151509 -42105074 + MER5B DNA MER1_type 59 178 0 1984 122 6 58 chr2 211152010 211152339 -42104244 + AluSx SINE Alu 1 312 0 1854 153 28 3 chr2 211153930 211154218 -42102365 + AluJb SINE Alu 1 295 -17 22 0 0 0 chr2 211154651 211154673 -42101910 + AT_rich Low_complexity Low_complexity 1 22 0 1710 192 35 52 chr2 211154673 211155136 -42101447 + L1MB4 LINE L1 5726 6180 0 33 43 0 0 chr2 211155780 211155827 -42100756 + AT_rich Low_complexity Low_complexity 1 47 0 275 191 71 24 chr2 211155887 211155971 -42100612 + L1M4 LINE L1 2203 2290 -3856 630 265 108 44 chr2 211156128 211156788 -42099795 + L1M4 LINE L1 2918 3619 -2527 1510 185 80 3 chr2 211156792 211157105 -42099478 - MER2 DNA MER2_type -8 337 1 227 301 32 0 chr2 211157241 211157334 -42099249 + L1M4 LINE L1 3997 4092 -2054 2230 119 0 0 chr2 211157377 211157671 -42098912 + AluSx SINE Alu 1 294 -18 731 159 7 58 chr2 211157756 211157894 -42098689 + FLAM_C SINE Alu 1 131 -2 281 247 20 16 chr2 211158094 211158202 -42098381 - MIR SINE MIR -57 151 42 1905 159 13 3 chr2 211158694 211158996 -42097587 + AluJb SINE Alu 1 305 -7 2409 97 0 0 chr2 211159198 211159506 -42097077 + AluSq SINE Alu 1 308 -5 365 137 0 0 chr2 211159700 211159773 -42096810 + L1MB3 LINE L1 6109 6181 -2 1670 155 0 8 chr2 211159781 211160039 -42096544 + AluJb SINE Alu 2 257 -55 27 29 0 0 chr2 211160039 211160073 -42096510 + AT_rich Low_complexity Low_complexity 1 34 0 349 158 18 35 chr2 211160442 211160556 -42096027 + L1ME4a LINE L1 5957 6068 -53 186 232 89 0 chr2 211160668 211160724 -42095859 + L2 LINE L2 3210 3270 -2 221 252 244 37 chr2 211161751 211161886 -42094697 + MER5A DNA MER1_type 27 189 0 299 303 28 28 chr2 211161888 211161997 -42094586 - MIR3 SINE MIR -50 158 50 2212 121 3 0 chr2 211162527 211162832 -42093751 + AluSx SINE Alu 1 306 -6 2127 98 28 0 chr2 211163227 211163512 -42093071 - AluSg SINE Alu -17 293 1 374 268 15 23 chr2 211164222 211164353 -42092230 - MER63 DNA MER1_type -3 1058 706 725 185 23 0 chr2 211164955 211165085 -42091498 - FLAM_C SINE Alu 0 133 1 26 0 0 27 chr2 211165392 211165404 -42091179 + AT_rich Low_complexity Low_complexity 1 12 -24 2130 133 0 0 chr2 211165404 211165697 -42090886 + AluSx SINE Alu 1 293 -19 26 0 0 27 chr2 211165697 211165721 -42090862 + AT_rich Low_complexity Low_complexity 12 36 0 653 239 63 90 chr2 211165937 211166205 -42090378 - L2 LINE L2 -5 3308 3048 734 137 66 107 chr2 211167070 211167200 -42089383 + MER5A DNA MER1_type 1 122 -67 2323 52 39 0 chr2 211167200 211167486 -42089097 - AluY SINE Alu -14 297 1 734 137 66 107 chr2 211167486 211167552 -42089031 + MER5A DNA MER1_type 122 189 0 230 0 33 0 chr2 211167931 211167961 -42088622 + (TG)n Simple_repeat Simple_repeat 2 32 0 1217 138 0 11 chr2 211169748 211169936 -42086647 + AluSq SINE Alu 128 313 0 524 249 178 11 chr2 211169965 211170150 -42086433 - MIR SINE MIR 0 262 47 276 198 23 0 chr2 211170365 211170451 -42086132 - L1ME4a LINE L1 -2 6119 6032 2272 117 3 0 chr2 211170590 211170890 -42085693 - AluSq SINE Alu -12 301 1 339 266 168 47 chr2 211170890 211171229 -42085354 - L1ME LINE L1 -387 5734 5355 189 107 0 0 chr2 211171487 211171515 -42085068 + (CA)n Simple_repeat Simple_repeat 1 28 0 469 272 158 6 chr2 211172628 211172815 -42083768 + MIR SINE MIR 38 250 -12 2184 131 3 10 chr2 211173736 211174050 -42082533 - AluSq SINE Alu -1 312 1 308 185 35 127 chr2 211174561 211174734 -42081849 - MER103 DNA DNA -7 159 3 944 156 40 52 chr2 211174854 211175004 -42081579 + FAM SINE Alu 1 150 -161 2160 135 0 0 chr2 211175004 211175300 -42081283 - AluSp SINE Alu -17 296 1 944 156 40 52 chr2 211175300 211175322 -42081261 + FAM SINE Alu 150 171 -4 202 54 27 27 chr2 211176026 211176063 -42080520 + (TA)n Simple_repeat Simple_repeat 2 38 0 997 244 14 0 chr2 211176247 211176468 -42080115 + MER58A DNA MER1_type 1 224 0 628 213 146 6 chr2 211176477 211176641 -42079942 - MER5A DNA MER1_type -1 188 2 25 0 0 0 chr2 211177512 211177537 -42079046 + AT_rich Low_complexity Low_complexity 1 25 0 312 102 0 0 chr2 211178482 211178531 -42078052 + (TG)n Simple_repeat Simple_repeat 2 50 0 241 267 67 0 chr2 211178569 211178629 -42077954 + L2 LINE L2 3245 3308 -5 21 0 0 0 chr2 211178936 211178957 -42077626 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr2 211179188 211179216 -42077367 + AT_rich Low_complexity Low_complexity 1 28 0 1714 172 44 3 chr2 211179778 211180074 -42076509 + AluJb SINE Alu 1 308 -4 192 77 0 0 chr2 211181565 211181591 -42074992 + (A)n Simple_repeat Simple_repeat 1 26 0 1165 155 91 14 chr2 211182169 211182388 -42074195 - MER46A DNA MER2_type 0 236 1 2058 105 0 14 chr2 211184087 211184423 -42072160 + AluSg SINE Alu 1 332 0 1674 154 0 103 chr2 211184735 211185065 -42071518 - AluJb SINE Alu -16 296 1 706 226 84 16 chr2 211185590 211185780 -42070803 + MIR SINE MIR 3 205 -57 243 242 113 0 chr2 211185808 211185870 -42070713 + MIR SINE MIR 194 262 0 2362 101 0 10 chr2 211186101 211186409 -42070174 + AluSq SINE Alu 1 305 -8 3490 46 0 0 chr2 211186409 211186840 -42069743 + L1PA4 LINE L1 5722 6152 -3 2216 86 3 26 chr2 211187322 211187624 -42068959 + AluSg SINE Alu 5 299 -11 21 57 0 0 chr2 211189757 211189792 -42066791 + AT_rich Low_complexity Low_complexity 1 35 0 1800 188 81 35 chr2 211190262 211190742 -42065841 + MLT1D LTR MaLR 4 505 0 2513 57 0 32 chr2 211190780 211191094 -42065489 - AluSq SINE Alu -9 304 1 207 0 0 0 chr2 211192016 211192039 -42064544 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1025 187 80 77 chr2 211192088 211192414 -42064169 + MER46C DNA MER2_type 1 327 -11 2272 119 0 0 chr2 211192588 211192890 -42063693 - AluSg SINE Alu -1 309 8 1155 333 108 32 chr2 211193083 211194138 -42062445 - L2 LINE L2 -752 2562 1428 21 0 0 0 chr2 211194266 211194287 -42062296 + AT_rich Low_complexity Low_complexity 1 21 0 229 308 106 29 chr2 211194526 211194630 -42061953 + L2 LINE L2 3200 3311 -2 401 269 64 33 chr2 211197509 211197762 -42058821 - L1ME2 LINE L1 -230 5940 5681 524 293 108 9 chr2 211199332 211199564 -42057019 - MIR SINE MIR 0 262 8 23 0 0 0 chr2 211201861 211201884 -42054699 + AT_rich Low_complexity Low_complexity 1 23 0 2165 82 0 3 chr2 211201980 211202286 -42054297 - AluSx SINE Alu 0 305 1 4644 114 95 45 chr2 211202377 211203237 -42053346 - MER4D LTR ERV1 0 903 1 406 225 40 53 chr2 211203469 211203620 -42052963 + L1MC4a LINE L1 5776 5924 -1884 2326 101 0 0 chr2 211203736 211204032 -42052551 - AluSg SINE Alu -14 296 1 4218 134 48 76 chr2 211204032 211204640 -42051943 - MER49 LTR ERV1 -39 884 260 180 0 0 0 chr2 211204640 211204660 -42051923 + (TTCA)n Simple_repeat Simple_repeat 4 23 0 1632 169 43 18 chr2 211204661 211204939 -42051644 - AluJo SINE Alu -27 285 1 4218 134 48 76 chr2 211204939 211205234 -42051349 - MER49 LTR ERV1 -662 261 5 1716 147 28 28 chr2 211205434 211205720 -42050863 - AluJb SINE Alu -22 290 5 545 248 0 26 chr2 211205901 211206018 -42050565 - L2 LINE L2 -12 3301 3188 1014 248 144 41 chr2 211206085 211206549 -42050034 + MLT1H1 LTR MaLR 44 555 0 888 242 100 12 chr2 211206609 211206849 -42049734 + MIR SINE MIR 2 262 0 1133 261 47 69 chr2 211206868 211206951 -42049632 - L2 LINE L2 -208 3105 3022 2563 62 0 3 chr2 211206951 211207257 -42049326 + AluY SINE Alu 1 305 -6 1133 261 47 69 chr2 211207257 211207760 -42048823 - L2 LINE L2 -291 3022 2355 1760 117 113 0 chr2 211207760 211208025 -42048558 + AluSq SINE Alu 1 295 -18 1133 261 47 69 chr2 211208025 211208290 -42048293 - L2 LINE L2 -958 2355 2086 528 257 136 39 chr2 211208347 211208553 -42048030 - L2 LINE L2 -404 2910 2685 421 193 11 0 chr2 211208555 211208643 -42047940 - Charlie1 DNA MER1_type -1073 1688 1600 1786 299 103 40 chr2 211208662 211208691 -42047892 - L2 LINE L2 -641 2673 2647 3266 169 26 78 chr2 211208691 211209419 -42047164 - LTR8 LTR ERV1 -1 690 1 1786 299 103 40 chr2 211209419 211209647 -42046936 - L2 LINE L2 -667 2647 2435 2386 74 0 17 chr2 211209647 211209964 -42046619 - AluY SINE Alu 0 312 1 1786 299 103 40 chr2 211209964 211210606 -42045977 - L2 LINE L2 -879 2435 1715 405 206 143 40 chr2 211211321 211211489 -42045094 - MIR SINE MIR -70 138 8 1977 161 0 3 chr2 211211503 211211808 -42044775 - AluJo SINE Alu -6 306 3 180 77 0 0 chr2 211212019 211212045 -42044538 + (TG)n Simple_repeat Simple_repeat 1 26 0 2349 86 7 7 chr2 211212206 211212508 -42044075 + AluSx SINE Alu 4 305 -7 2317 56 0 3 chr2 211212882 211213189 -42043394 + AluY SINE Alu 1 306 0 27 49 0 0 chr2 211213739 211213780 -42042803 + AT_rich Low_complexity Low_complexity 1 41 0 401 122 0 211 chr2 211214685 211214745 -42041838 + MER96B DNA MER1_type? 242 251 -166 2298 104 0 7 chr2 211214745 211215054 -42041529 - AluSx SINE Alu -5 307 1 401 122 0 211 chr2 211215054 211215149 -42041434 + MER96B DNA MER1_type? 251 364 -53 229 242 22 11 chr2 211215229 211215320 -42041263 + CT-rich Low_complexity Low_complexity 2 93 0 2220 128 0 0 chr2 211216547 211216853 -42039730 - AluSq SINE Alu -5 308 3 209 305 241 28 chr2 211216859 211217000 -42039583 + MIR SINE MIR 49 219 -43 332 267 70 0 chr2 211217133 211217219 -42039364 + MIR SINE MIR 16 107 -155 3278 143 41 22 chr2 211217706 211218246 -42038337 - MER44D DNA MER2_type 0 605 1 2427 95 3 0 chr2 211218898 211219203 -42037380 + AluSq SINE Alu 1 306 -7 2278 111 0 0 chr2 211219514 211219820 -42036763 - AluSx SINE Alu -6 306 1 414 242 8 42 chr2 211219821 211219941 -42036642 + MIR SINE MIR 72 187 -75 1990 214 71 133 chr2 211220171 211220485 -42036098 - L1MC5 LINE L1 -86 7875 7543 1788 188 10 0 chr2 211220485 211220793 -42035790 - AluJo SINE Alu -1 311 1 1990 214 71 133 chr2 211220793 211221995 -42034588 - L1MC5 LINE L1 -418 7543 6424 1559 211 60 67 chr2 211221996 211222524 -42034059 + MER39 LTR ERV1 1 707 0 890 168 0 0 chr2 211222580 211222723 -42033860 - FLAM_C SINE Alu 0 143 1 572 203 34 0 chr2 211222762 211222880 -42033703 - L1MC5 LINE L1 -1907 5901 5780 596 91 13 0 chr2 211223285 211223362 -42033221 - MADE1 DNA Mariner 0 80 3 199 140 40 0 chr2 211223384 211223434 -42033149 + CT-rich Low_complexity Low_complexity 2 53 0 822 123 8 0 chr2 211223436 211223558 -42033025 - FRAM SINE Alu 0 176 54 901 175 25 0 chr2 211224072 211224232 -42032351 + FAM SINE Alu 1 41 -8 741 148 49 8 chr2 211224295 211224417 -42032166 + AluJo SINE Alu 9 135 -177 1413 208 27 0 chr2 211224419 211224713 -42031870 + AluJo SINE Alu 3 304 -8 26 30 0 0 chr2 211224801 211224834 -42031749 + AT_rich Low_complexity Low_complexity 1 33 0 2612 53 0 0 chr2 211224907 211225209 -42031374 + AluY SINE Alu 1 302 -9 180 176 0 0 chr2 211225234 211225268 -42031315 + CT-rich Low_complexity Low_complexity 2 35 0 219 235 37 62 chr2 211227700 211227781 -42028802 - MIR3 SINE MIR -22 186 108 24 0 0 0 chr2 211228395 211228419 -42028164 + AT_rich Low_complexity Low_complexity 1 24 0 856 41 0 0 chr2 211228419 211228516 -42028067 + HY3 scRNA scRNA 2 98 -3 252 77 0 0 chr2 211228644 211228683 -42027900 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 590 141 0 0 chr2 211228694 211228779 -42027804 - AluSg/x SINE Alu -44 266 182 284 293 15 56 chr2 211229458 211229656 -42026927 + L2 LINE L2 2844 3033 -280 921 103 29 7 chr2 211229667 211229803 -42026780 + AluSg/x SINE Alu 156 294 -16 240 268 159 14 chr2 211229977 211230115 -42026468 + L1MC3 LINE L1 5313 5470 -2338 2484 164 16 0 chr2 211230142 211230575 -42026008 + L1MC3 LINE L1 6861 7300 -485 2319 88 10 3 chr2 211230575 211230880 -42025703 - AluSx SINE Alu -5 307 1 2498 58 0 0 chr2 211230892 211231187 -42025396 - AluY SINE Alu -16 295 1 736 310 22 25 chr2 211231353 211231627 -42024956 - L2 LINE L2 -426 2888 2616 2348 102 0 3 chr2 211231628 211231941 -42024642 + AluSx SINE Alu 1 312 0 237 103 0 0 chr2 211232075 211232114 -42024469 - L1MD2 LINE L1 -10 6349 6311 193 365 16 0 chr2 211232526 211232589 -42023994 - L2 LINE L2 -8 3264 3201 694 287 73 12 chr2 211232751 211232998 -42023585 + MIR SINE MIR 1 262 0 218 304 76 13 chr2 211233243 211233322 -42023261 - L2 LINE L2 -20 3252 3169 2023 103 4 0 chr2 211234687 211234950 -42021633 - AluSq SINE Alu -11 302 39 327 263 11 42 chr2 211235115 211235210 -42021373 - L2 LINE L2 -15 3298 3207 386 240 93 31 chr2 211235578 211235707 -42020876 - MIR SINE MIR -77 185 49 4898 120 21 37 chr2 211235861 211236437 -42020146 - L1PA16 LINE L1 -5 6161 5600 3235 160 2 4 chr2 211236437 211236924 -42019659 + MER66B LTR ERV1 1 486 0 4898 120 21 37 chr2 211236924 211237163 -42019420 - L1PA16 LINE L1 -566 5600 5359 283 306 10 0 chr2 211237326 211237424 -42019159 - MIR SINE MIR -112 150 52 422 302 105 17 chr2 211237852 211238024 -42018559 - L2 LINE L2 -1 3271 3085 1171 252 73 78 chr2 211238641 211238694 -42017889 - L2 LINE L2 -13 3300 3248 227 31 31 0 chr2 211238694 211238726 -42017857 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 1171 252 73 78 chr2 211238726 211239458 -42017125 - L2 LINE L2 -65 3248 2507 547 262 30 43 chr2 211239500 211239796 -42016787 + Charlie7 DNA MER1_type 371 735 -1877 246 209 85 47 chr2 211239800 211239929 -42016654 + Charlie7 DNA MER1_type 2357 2490 -122 404 330 31 16 chr2 211240180 211240374 -42016209 - MIR SINE MIR -48 214 18 182 273 50 71 chr2 211240378 211240477 -42016106 - L2 LINE L2 -9 3304 3208 1265 296 101 4 chr2 211240697 211241173 -42015410 - MLT1K LTR MaLR -57 531 10 2183 97 0 33 chr2 211241418 211241718 -42014865 - AluSx SINE Alu -22 290 1 185 65 32 0 chr2 211243598 211243629 -42012954 + (TTTTTG)n Simple_repeat Simple_repeat 4 35 0 204 163 23 0 chr2 211244068 211244111 -42012472 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 228 372 131 7 chr2 211244111 211244248 -42012335 - L2 LINE L2 0 3272 3119 2079 126 3 3 chr2 211244770 211245072 -42011511 + AluSg SINE Alu 1 302 -8 439 324 38 81 chr2 211245187 211245693 -42010890 - L2 LINE L2 -1937 1377 894 240 314 186 0 chr2 211245703 211245805 -42010778 - L2 LINE L2 -24 3289 3169 2652 43 3 0 chr2 211245916 211246219 -42010364 + AluY SINE Alu 1 304 -7 878 198 34 61 chr2 211246378 211246641 -42009942 - MER112 DNA MER1_type 0 256 1 223 348 14 0 chr2 211246654 211246723 -42009860 - MIR SINE MIR -116 146 77 1853 176 3 0 chr2 211246901 211247197 -42009386 + AluJo SINE Alu 1 297 -15 813 245 0 0 chr2 211247346 211247497 -42009086 - FRAM SINE Alu -14 162 12 322 277 21 0 chr2 211247565 211247659 -42008924 - MER5A DNA MER1_type -85 104 9 529 311 123 41 chr2 211247763 211248252 -42008331 - L2 LINE L2 -816 2498 1970 1879 169 142 14 chr2 211248432 211248799 -42007784 - MER21B LTR ERV1 -449 414 1 271 340 0 10 chr2 211248821 211248921 -42007662 - L2 LINE L2 -563 2751 2653 620 336 79 6 chr2 211249157 211249487 -42007096 - L2 LINE L2 -833 2481 2128 29 28 0 0 chr2 211249499 211249535 -42007048 + AT_rich Low_complexity Low_complexity 1 36 0 2133 136 0 3 chr2 211249535 211249845 -42006738 - AluSx SINE Alu -3 309 1 970 106 15 0 chr2 211249846 211249978 -42006605 - AluJo SINE Alu -178 134 1 431 262 155 18 chr2 211250019 211250187 -42006396 - L2 LINE L2 -1241 2073 1883 705 351 127 21 chr2 211250271 211250901 -42005682 - L2 LINE L2 -2496 818 122 292 271 172 8 chr2 211251581 211251703 -42004880 + MIR SINE MIR 34 175 -87 2264 116 0 0 chr2 211251786 211252078 -42004505 - AluSx SINE Alu -15 297 6 201 147 0 0 chr2 211253437 211253471 -42003112 + (TTC)n Simple_repeat Simple_repeat 2 35 0 246 136 0 0 chr2 211254261 211254305 -42002278 + (CATA)n Simple_repeat Simple_repeat 4 47 0 394 259 143 9 chr2 211254353 211254465 -42002118 + L2 LINE L2 3137 3263 -9 812 258 118 12 chr2 211254848 211255178 -42001405 - MLT1J LTR MaLR -30 481 117 21 36 0 0 chr2 211255562 211255590 -42000993 + AT_rich Low_complexity Low_complexity 1 28 0 607 147 12 0 chr2 211255600 211255763 -42000820 + (TA)n Simple_repeat Simple_repeat 1 165 0 309 266 11 32 chr2 211255765 211255859 -42000724 - L1MC4 LINE L1 -1339 6703 6612 357 99 37 0 chr2 211255866 211255947 -42000636 + (TA)n Simple_repeat Simple_repeat 1 84 0 1035 94 0 0 chr2 211255947 211256074 -42000509 - AluSg/x SINE Alu -18 294 168 726 195 0 16 chr2 211256200 211256328 -42000255 - FLAM_A SINE Alu -7 126 1 254 310 0 92 chr2 211256545 211256687 -41999896 + MIR SINE MIR 19 147 -61 1351 203 58 38 chr2 211256749 211257040 -41999543 + AluJo SINE Alu 1 297 -5 429 206 0 0 chr2 211257041 211257133 -41999450 + GA-rich Low_complexity Low_complexity 2 93 0 817 59 0 17 chr2 211257145 211257263 -41999320 + (GGAA)n Simple_repeat Simple_repeat 1 116 0 1359 151 4 40 chr2 211257906 211258131 -41998452 + MER20 DNA MER1_type 1 217 -2 1606 146 45 45 chr2 211258157 211258444 -41998139 - AluJo SINE Alu -25 287 1 961 27 9 0 chr2 211258688 211258799 -41997784 - AluY SINE Alu -21 290 179 281 200 55 55 chr2 211258817 211258927 -41997656 - L1ME3A LINE L1 -268 5902 5793 2318 222 53 2 chr2 211259000 211259401 -41997182 + L1MC4 LINE L1 7493 7929 -113 273 57 0 0 chr2 211259401 211259436 -41997147 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 2318 222 53 2 chr2 211259436 211259557 -41997026 + L1MC4 LINE L1 7929 8042 0 250 290 81 88 chr2 211259614 211259710 -41996873 - L1MDa LINE L1 -3408 3132 3037 2087 126 33 0 chr2 211259710 211260012 -41996571 - AluSx SINE Alu 0 312 1 250 290 81 88 chr2 211260012 211260212 -41996371 - L1MDa LINE L1 -3503 3037 2838 694 283 108 24 chr2 211260217 211260858 -41995725 - L1MDa LINE L1 -4559 1981 1391 615 77 13 0 chr2 211260868 211260946 -41995637 - MADE1 DNA Mariner 0 80 2 2022 151 27 9 chr2 211261709 211262047 -41994536 - L1MB4 LINE L1 0 6180 5837 2077 90 11 0 chr2 211262928 211263196 -41993387 - AluSg SINE Alu -16 294 24 865 133 0 53 chr2 211264409 211264560 -41992023 + FLAM_C SINE Alu 1 143 0 2323 116 0 0 chr2 211264604 211264907 -41991676 + AluSx SINE Alu 1 303 -9 909 154 0 22 chr2 211265207 211265343 -41991240 + FLAM_C SINE Alu 1 133 0 29 47 0 0 chr2 211265417 211265460 -41991123 + AT_rich Low_complexity Low_complexity 1 43 0 189 0 0 0 chr2 211265583 211265604 -41990979 + (GA)n Simple_repeat Simple_repeat 2 22 0 482 197 150 8 chr2 211265789 211265916 -41990667 + HsTC2 DNA Tc2 4 148 -1750 * 2598 157 114 48 chr2 211265913 211265948 -41990635 + HsTC2 DNA Tc2 1264 1295 -603 2231 112 7 0 chr2 211265948 211266244 -41990339 + AluSx SINE Alu 1 298 -14 2598 157 114 48 chr2 211266244 211266796 -41989787 + HsTC2 DNA Tc2 1295 1890 -8 1459 129 85 8 chr2 211267601 211267849 -41988734 + AluJb SINE Alu 1 267 -45 2100 148 17 20 chr2 211268108 211268459 -41988124 - L1MB4 LINE L1 -1 6179 5830 490 341 83 0 chr2 211268790 211268995 -41987588 + MIR SINE MIR 31 252 -10 2394 89 0 0 chr2 211269556 211269860 -41986723 - AluSg SINE Alu -6 304 1 618 184 97 9 chr2 211269895 211270009 -41986574 + FLAM_A SINE Alu 5 128 -5 2176 119 45 53 chr2 211270336 211270681 -41985902 - L1M2 LINE L1 -587 5704 5358 1173 168 58 150 chr2 211270681 211270747 -41985836 - MLT1A1 LTR MaLR -2 363 292 2504 93 0 0 chr2 211270747 211271058 -41985525 + AluSx SINE Alu 1 311 -1 1173 168 58 150 chr2 211271058 211271391 -41985192 - MLT1A1 LTR MaLR -73 292 1 2176 119 45 53 chr2 211271391 211271405 -41985178 - L1M2 LINE L1 -933 5358 5345 2169 120 3 0 chr2 211271405 211271696 -41984887 - AluSx SINE Alu -20 292 1 2176 119 45 53 chr2 211271696 211271901 -41984682 - L1M2 LINE L1 -946 5345 5112 2318 69 0 42 chr2 211273617 211273923 -41982660 + AluY SINE Alu 1 293 -18 226 342 44 51 chr2 211274167 211274325 -41982258 + L2 LINE L2 3106 3262 -10 2434 82 0 7 chr2 211275562 211275865 -41980718 - AluSq SINE Alu -12 301 1 2803 7 0 10 chr2 211276679 211276986 -41979597 + AluYb8 SINE Alu 1 304 -14 254 233 33 0 chr2 211277159 211277219 -41979364 - L2 LINE L2 -14 3299 3238 513 190 7 15 chr2 211278071 211278208 -41978375 + CT-rich Low_complexity Low_complexity 1 136 0 194 225 0 0 chr2 211278495 211278535 -41978048 + L3 LINE CR1 178 217 -1360 229 271 106 0 chr2 211280863 211280948 -41975635 + MIR SINE MIR 57 150 -112 201 277 143 27 chr2 211280962 211281074 -41975509 - MIR SINE MIR -21 241 117 182 309 0 0 chr2 211281217 211281259 -41975324 + L2 LINE L2 3252 3293 -20 2302 103 3 0 chr2 211281289 211281590 -41974993 - AluSx SINE Alu -2 310 9 229 227 0 0 chr2 211282132 211282176 -41974407 + L2 LINE L2 3265 3308 -5 226 283 0 0 chr2 211282173 211282219 -41974364 + MIR SINE MIR 22 67 -141 * 538 273 88 37 chr2 211282291 211282507 -41974076 - MIR SINE MIR -2 260 34 38 22 0 0 chr2 211283099 211283144 -41973439 + AT_rich Low_complexity Low_complexity 1 45 0 325 91 0 0 chr2 211283307 211283351 -41973232 + Alu SINE Alu 1 44 -259 2164 123 3 3 chr2 211283351 211283661 -41972922 + AluSx SINE Alu 1 310 -2 22 35 0 0 chr2 211283727 211283756 -41972827 + AT_rich Low_complexity Low_complexity 1 29 0 241 254 191 16 chr2 211283774 211283900 -41972683 - L2 LINE L2 -2 3311 3164 2226 113 0 3 chr2 211284054 211284356 -41972227 - AluSx SINE Alu -11 301 1 374 98 0 0 chr2 211284387 211284438 -41972145 - Alu SINE Alu -250 51 1 485 336 80 18 chr2 211284472 211284799 -41971784 - L2 LINE L2 -924 2390 2044 2511 93 0 0 chr2 211285345 211285657 -41970926 + AluSx SINE Alu 1 312 0 333 0 0 0 chr2 211285748 211285785 -41970798 + (TG)n Simple_repeat Simple_repeat 2 38 0 285 211 244 24 chr2 211286846 211286969 -41969614 - MIR SINE MIR -6 256 107 1676 169 3 23 chr2 211287082 211287383 -41969200 + AluJo SINE Alu 3 297 -15 205 324 157 0 chr2 211287408 211287510 -41969073 + MER5B DNA MER1_type 57 174 -4 380 246 0 79 chr2 211287628 211287742 -41968841 - MIR SINE MIR -112 150 46 599 204 78 37 chr2 211287991 211288182 -41968401 - MIR SINE MIR -62 200 2 7772 44 8 0 chr2 211288337 211289277 -41967306 + L1PA6 LINE L1 5206 6152 -2 195 288 18 81 chr2 211289307 211289418 -41967165 - MIR SINE MIR -78 130 27 1394 164 65 31 chr2 211290164 211290299 -41966284 + AluJo SINE Alu 1 130 -182 185 0 40 0 chr2 211290299 211290324 -41966259 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1394 164 65 31 chr2 211290324 211290481 -41966102 + AluJo SINE Alu 130 303 -9 1766 168 37 0 chr2 211290888 211291186 -41965397 - AluJb SINE Alu -3 309 1 324 381 30 22 chr2 211291256 211291390 -41965193 + L2 LINE L2 3128 3262 -10 2126 169 117 5 chr2 211291409 211291829 -41964754 - MLT1C LTR MaLR 0 467 1 2500 77 0 3 chr2 211293508 211293819 -41962764 + AluSx SINE Alu 1 310 -2 985 209 41 0 chr2 211293857 211294053 -41962530 - MER3 DNA MER1_type -4 205 2 538 201 189 37 chr2 211294129 211294293 -41962290 - MIR SINE MIR -27 235 47 814 271 78 87 chr2 211295040 211295639 -41960944 + L1ME4a LINE L1 5511 6104 -17 2026 134 7 3 chr2 211296535 211296834 -41959749 - AluJb SINE Alu -12 300 1 300 319 89 19 chr2 211298024 211298237 -41958346 + L2 LINE L2 2827 3054 -218 1026 196 16 14 chr2 211298382 211298691 -41957892 - MLT1A1 LTR MaLR -15 350 3 254 288 216 7 chr2 211298700 211298839 -41957744 + L2 LINE L2 3088 3255 -17 1772 155 0 0 chr2 211299117 211299382 -41957201 - AluSx SINE Alu -12 300 36 222 174 0 0 chr2 211299917 211299963 -41956620 + (TG)n Simple_repeat Simple_repeat 2 47 0 192 77 0 0 chr2 211301628 211301654 -41954929 + (CA)n Simple_repeat Simple_repeat 2 27 0 363 96 0 0 chr2 211301903 211301955 -41954628 + (TG)n Simple_repeat Simple_repeat 1 52 0 183 267 0 0 chr2 211302370 211302445 -41954138 + (TG)n Simple_repeat Simple_repeat 1 75 0 186 43 0 0 chr2 211303921 211303944 -41952639 + (TC)n Simple_repeat Simple_repeat 2 24 0 213 277 101 95 chr2 211304307 211304455 -41952128 - L3b LINE CR1 -318 1265 1117 272 362 159 14 chr2 211304524 211304814 -41951769 - L2 LINE L2 -1 3271 2940 255 269 30 0 chr2 211305472 211305539 -41951044 - MIR3 SINE MIR -31 177 109 419 313 110 0 chr2 211305567 211305730 -41950853 - MIR SINE MIR -47 215 35 306 286 51 41 chr2 211305762 211305860 -41950723 - MIR3 SINE MIR -108 100 1 201 39 0 0 chr2 211306004 211306030 -41950553 + (TTTTC)n Simple_repeat Simple_repeat 4 29 0 2183 114 3 0 chr2 211306065 211306362 -41950221 - AluSq SINE Alu -15 298 1 423 298 127 65 chr2 211306589 211307116 -41949467 + L1ME4a LINE L1 5484 6043 -78 197 324 169 37 chr2 211307182 211307318 -41949265 + MIR3 SINE MIR 5 158 -50 227 189 57 0 chr2 211308307 211308360 -41948223 + CT-rich Low_complexity Low_complexity 4 59 0 250 346 46 8 chr2 211309143 211309273 -41947310 - MIR SINE MIR 0 262 128 2241 117 3 0 chr2 211309505 211309812 -41946771 + AluSx SINE Alu 1 308 -4 233 319 151 32 chr2 211309951 211310136 -41946447 + L2 LINE L2 2811 3017 -255 360 89 33 0 chr2 211310942 211311007 -41945576 + AluSg/x SINE Alu 206 250 -50 313 162 15 63 chr2 211311000 211311079 -41945504 - AluJ/FLAM SINE Alu -238 64 2 * 404 256 22 0 chr2 211311194 211311284 -41945299 + MER81 DNA DNA 22 113 -1 186 339 0 0 chr2 211312705 211312767 -41943816 - MIR SINE MIR -6 256 195 369 0 0 0 chr2 211313811 211313852 -41942731 + (CA)n Simple_repeat Simple_repeat 1 41 0 435 301 192 5 chr2 211314127 211314330 -41942253 + L3 LINE CR1 428 668 -909 368 199 99 99 chr2 211314353 211314504 -41942079 - MIR SINE MIR -87 175 25 283 264 69 0 chr2 211314896 211314968 -41941615 + L3 LINE CR1 1490 1566 -11 1188 241 76 93 chr2 211315401 211315606 -41940977 + MLT1I LTR MaLR 6 202 -207 1033 161 11 39 chr2 211315606 211315786 -41940797 - FAM SINE Alu 0 175 1 1188 241 76 93 chr2 211315786 211315990 -41940593 + MLT1I LTR MaLR 202 408 -1 981 183 55 20 chr2 211316011 211316213 -41940370 - MER3 DNA MER1_type 0 209 1 1695 82 160 12 chr2 211316961 211317229 -41939354 + AluY SINE Alu 1 304 0 689 195 8 0 chr2 211317267 211317390 -41939193 + FLAM_A SINE Alu 1 124 -9 936 264 89 71 chr2 211317420 211317740 -41938843 - MLT1L LTR MaLR -10 605 267 2279 114 7 0 chr2 211317740 211318046 -41938537 + AluSg SINE Alu 1 308 -2 936 264 89 71 chr2 211318046 211318319 -41938264 - MLT1L LTR MaLR -348 267 1 853 264 20 111 chr2 211319160 211319492 -41937091 + L2 LINE L2 2903 3185 -128 1848 130 0 0 chr2 211319492 211319754 -41936829 - AluSq SINE Alu -2 311 50 853 264 20 111 chr2 211319754 211319872 -41936711 + L2 LINE L2 3185 3312 -1 500 295 48 19 chr2 211319908 211320118 -41936465 + L2 LINE L2 3098 3313 0 735 169 22 143 chr2 211320295 211320461 -41936122 + MIR SINE MIR 52 237 -25 1955 163 0 3 chr2 211320461 211320761 -41935822 + AluJo SINE Alu 1 299 -13 2188 108 3 0 chr2 211320764 211321051 -41935532 + AluSx SINE Alu 1 288 -24 735 169 22 143 chr2 211321051 211321111 -41935472 + MIR SINE MIR 239 254 -8 2471 73 0 13 chr2 211322362 211322677 -41933906 + AluY SINE Alu 1 311 0 2433 121 15 95 chr2 211322843 211322940 -41933643 - Tigger2a DNA MER2_type -2274 434 331 1959 163 0 3 chr2 211322940 211323240 -41933343 - AluJo SINE Alu -13 299 1 2433 121 15 95 chr2 211323240 211323614 -41932969 - Tigger2a DNA MER2_type -2377 331 1 558 0 0 0 chr2 211323614 211323676 -41932907 + (TA)n Simple_repeat Simple_repeat 1 62 0 1429 166 123 7 chr2 211323760 211324037 -41932546 - AluSg1 SINE Alu 0 309 1 180 318 60 53 chr2 211324172 211324323 -41932260 + L2 LINE L2 2286 2437 -877 734 161 0 15 chr2 211324392 211324529 -41932054 + MER5A DNA MER1_type 3 137 -52 355 336 124 24 chr2 211324578 211324634 -41931949 + L2 LINE L2 2621 2670 -602 725 158 171 0 chr2 211324634 211324786 -41931797 - MER5B DNA MER1_type 0 178 1 355 336 124 24 chr2 211324786 211325152 -41931431 + L2 LINE L2 2670 3091 -181 2460 93 3 0 chr2 211325227 211325537 -41931046 - AluSp SINE Alu -2 311 1 219 343 14 0 chr2 211325597 211325670 -41930913 + L2 LINE L2 3199 3272 0 287 280 121 30 chr2 211325843 211325975 -41930608 + MIR SINE MIR 118 261 -1 185 361 176 0 chr2 211326026 211326134 -41930449 + L2 LINE L2 3125 3251 -21 181 259 56 0 chr2 211326282 211326336 -41930247 - MIR3 SINE MIR -27 181 125 270 0 0 0 chr2 211326839 211326869 -41929714 + (TGAA)n Simple_repeat Simple_repeat 2 31 0 616 238 6 25 chr2 211327571 211327731 -41928852 + MIR SINE MIR 38 194 -68 206 351 0 0 chr2 211327872 211327946 -41928637 - MIR SINE MIR -1 261 188 28 0 0 0 chr2 211327997 211328025 -41928558 + AT_rich Low_complexity Low_complexity 1 28 0 2198 93 7 7 chr2 211328025 211328314 -41928269 - AluSx SINE Alu -23 289 1 333 260 22 127 chr2 211328315 211328362 -41928221 - MIR SINE MIR -100 162 112 2278 129 0 0 chr2 211328362 211328673 -41927910 + AluSx SINE Alu 2 312 0 333 260 22 127 chr2 211328673 211328806 -41927777 - MIR SINE MIR -150 112 1 1180 221 109 6 chr2 211328936 211329267 -41927316 + MARNA DNA Mariner 179 543 -43 1871 197 53 66 chr2 211330149 211330352 -41926231 + MLT1D LTR MaLR 1 205 -300 3348 123 61 50 chr2 211330352 211330409 -41926174 - MER4B LTR ERV1 0 610 555 2414 76 0 0 chr2 211330409 211330697 -41925886 + AluSc SINE Alu 1 288 -21 3348 123 61 50 chr2 211330697 211331242 -41925341 - MER4B LTR ERV1 -55 555 1 1871 197 53 66 chr2 211331242 211331550 -41925033 + MLT1D LTR MaLR 205 505 0 488 291 170 31 chr2 211331674 211332060 -41924523 - LTR16A LTR ERVL -6 444 22 482 309 14 51 chr2 211332146 211332363 -41924220 - MIR SINE MIR 0 262 54 195 302 12 47 chr2 211333517 211333573 -41923010 + MIR SINE MIR 68 122 -86 2405 105 0 6 chr2 211333573 211333887 -41922696 - AluSx SINE Alu 0 312 1 195 302 12 47 chr2 211333887 211333916 -41922667 + MIR SINE MIR 122 150 -58 200 208 21 0 chr2 211334131 211334142 -41922441 + (TATATG)n Simple_repeat Simple_repeat 2 11 -39 1211 191 12 45 chr2 211334142 211334388 -41922195 - MER8 DNA MER2_type 0 239 2 200 208 21 0 chr2 211334388 211334424 -41922159 + (TATATG)n Simple_repeat Simple_repeat 11 50 0 225 94 0 0 chr2 211334941 211334973 -41921610 + (TA)n Simple_repeat Simple_repeat 2 33 0 303 93 0 0 chr2 211334974 211335017 -41921566 + (TG)n Simple_repeat Simple_repeat 2 44 0 317 304 72 69 chr2 211335084 211335202 -41921381 - L2 LINE L2 -25 3247 3131 2784 123 39 2 chr2 211335202 211335615 -41920968 - MSTC LTR MaLR 0 428 1 317 304 72 69 chr2 211335615 211335828 -41920755 - L2 LINE L2 -141 3131 2915 2282 109 3 0 chr2 211336614 211336917 -41919666 + AluSx SINE Alu 1 304 -8 414 0 0 0 chr2 211337114 211337160 -41919423 + (CA)n Simple_repeat Simple_repeat 1 46 0 29 0 0 0 chr2 211337212 211337241 -41919342 + AT_rich Low_complexity Low_complexity 1 29 0 714 144 8 8 chr2 211337252 211337377 -41919206 - L1MB8 LINE L1 -6 6172 6048 2275 109 3 0 chr2 211337408 211337711 -41918872 - AluSq SINE Alu -9 304 1 603 187 9 0 chr2 211337712 211337819 -41918764 - FLAM_A SINE Alu -31 111 4 2634 173 42 10 chr2 211337820 211338340 -41918243 - L1MB8 LINE L1 -115 6063 5527 308 304 35 9 chr2 211338792 211338907 -41917676 + MER117 DNA MER1_type 80 197 0 182 319 0 0 chr2 211338950 211338997 -41917586 - MIR SINE MIR -110 98 52 585 155 48 0 chr2 211339548 211339651 -41916932 + L1MB3 LINE L1 6075 6182 -1 29 28 0 0 chr2 211339817 211339853 -41916730 + AT_rich Low_complexity Low_complexity 1 36 0 1950 135 0 0 chr2 211339870 211340151 -41916432 - AluSx SINE Alu -27 285 5 2098 124 7 0 chr2 211340182 211340480 -41916103 + AluSq SINE Alu 5 304 -9 225 227 182 11 chr2 211340548 211340636 -41915947 - L2 LINE L2 -25 3247 3145 902 160 21 103 chr2 211341506 211341825 -41914758 - L1MB7 LINE L1 0 6180 5902 33 25 0 0 chr2 211341825 211341865 -41914718 + AT_rich Low_complexity Low_complexity 1 40 0 472 264 60 60 chr2 211341868 211341928 -41914655 - L1ME4a LINE L1 -157 5964 5905 1735 192 6 0 chr2 211341928 211342261 -41914322 - L1MB7 LINE L1 -278 5906 5572 2990 121 141 24 chr2 211342331 211342877 -41913706 + MER4B LTR ERV1 1 610 0 240 163 0 0 chr2 211344209 211344252 -41912331 + (TAGA)n Simple_repeat Simple_repeat 2 44 0 256 313 0 0 chr2 211344864 211344947 -41911636 + MIR SINE MIR 111 193 -69 423 211 31 67 chr2 211345218 211345412 -41911171 + L1MC5 LINE L1 7472 7658 -303 884 113 8 8 chr2 211345412 211345536 -41911047 + AluSq/x SINE Alu 1 124 -188 568 197 112 76 chr2 211345570 211345819 -41910764 + L1MC5 LINE L1 7645 7902 -59 221 309 92 26 chr2 211346738 211346890 -41909693 + MIR SINE MIR 20 181 -81 318 237 115 22 chr2 211347005 211347144 -41909439 + MIR SINE MIR 111 262 0 600 180 0 36 chr2 211347170 211347281 -41909302 + U6 snRNA snRNA 1 107 0 2092 137 3 6 chr2 211347666 211347979 -41908604 - AluJb SINE Alu 0 312 1 209 32 0 32 chr2 211347982 211348013 -41908570 + (TTTTTG)n Simple_repeat Simple_repeat 4 33 0 198 0 0 0 chr2 211348084 211348106 -41908477 + (A)n Simple_repeat Simple_repeat 1 22 0 276 150 0 0 chr2 211348918 211348958 -41907625 + 5S rRNA rRNA 1 40 -81 442 317 78 22 chr2 211349334 211349564 -41907019 + MIR SINE MIR 20 262 0 196 318 109 46 chr2 211349788 211349941 -41906642 - MIR SINE MIR -67 141 30 311 341 115 14 chr2 211350864 211351081 -41905502 + L3b LINE CR1 1214 1452 -131 903 246 49 2 chr2 211352155 211352393 -41904190 + MIR SINE MIR 3 250 -12 338 341 69 0 chr2 211352618 211352791 -41903792 + MIR3 SINE MIR 15 199 -9 222 37 0 0 chr2 211352827 211352854 -41903729 + (TG)n Simple_repeat Simple_repeat 2 28 0 401 134 45 0 chr2 211354227 211354294 -41902289 + MLT1D LTR MaLR 1 70 -435 1356 167 4 17 chr2 211354332 211354571 -41902012 - MER50 LTR ERV1 -38 696 461 2261 130 33 28 chr2 211354573 211354935 -41901648 - THE1B LTR MaLR 0 364 1 * 2931 136 33 2 chr2 211354935 211355384 -41901199 - MER50 LTR ERV1 -271 463 1 2087 187 28 28 chr2 211355384 211355817 -41900766 + MLT1D LTR MaLR 67 499 -6 224 125 0 0 chr2 211355988 211356020 -41900563 - L2 LINE L2 -11 3261 3230 * 392 297 109 0 chr2 211355994 211356159 -41900424 - MIR SINE MIR -11 251 69 224 281 78 0 chr2 211356300 211356364 -41900219 - L2 LINE L2 0 3313 3245 481 279 42 54 chr2 211356978 211357218 -41899365 - MLT1K LTR MaLR -16 572 336 366 273 57 45 chr2 211357277 211357453 -41899130 - MLT1K LTR MaLR -378 210 33 366 255 51 57 chr2 211359083 211359240 -41897343 - MIR SINE MIR -105 157 2 359 261 109 44 chr2 211360282 211360594 -41895989 + LTR16B LTR ERVL 32 446 -18 1167 215 66 51 chr2 211360672 211361089 -41895494 + MER39 LTR ERV1 90 707 0 528 320 199 34 chr2 211361714 211362694 -41893889 - L2 LINE L2 -424 2890 1749 289 189 91 114 chr2 211362757 211362830 -41893753 - L1MC4 LINE L1 0 8042 7972 2499 88 0 3 chr2 211362830 211363135 -41893448 + AluSx SINE Alu 3 306 -6 289 189 91 114 chr2 211363135 211363193 -41893390 - L1MC4 LINE L1 -70 7972 7914 1885 160 182 0 chr2 211363308 211363595 -41892988 - Tigger2 DNA MER2_type -1 2717 2347 186 43 0 0 chr2 211363595 211363618 -41892965 + (GGA)n Simple_repeat Simple_repeat 2 24 0 1885 160 182 0 chr2 211363618 211363699 -41892884 - Tigger2 DNA MER2_type -371 2347 2282 272 270 14 14 chr2 211363683 211363757 -41892826 + MER8 DNA MER2_type 166 239 0 * 340 181 9 69 chr2 211363767 211363883 -41892700 - L1MC4 LINE L1 -180 7862 7754 669 208 32 7 chr2 211363914 211364068 -41892515 - MER39 LTR ERV1 0 707 550 200 237 0 17 chr2 211364341 211364400 -41892183 + (TTTA)n Simple_repeat Simple_repeat 3 60 0 1949 159 7 0 chr2 211364953 211365248 -41891335 - AluJb SINE Alu -14 298 2 436 220 227 8 chr2 211365248 211365380 -41891203 - MIR3 SINE MIR -5 203 43 290 236 55 118 chr2 211365431 211365532 -41891051 + L2 LINE L2 3152 3245 -27 2196 104 3 7 chr2 211365532 211365829 -41890754 - AluSx SINE Alu -16 296 1 290 236 55 118 chr2 211365829 211365854 -41890729 + L2 LINE L2 3245 3270 -2 866 242 63 32 chr2 211366130 211366382 -41890201 + MIR SINE MIR 3 262 0 1769 109 63 0 chr2 211366709 211366948 -41889635 + AluSx SINE Alu 1 254 -58 1710 160 3 60 chr2 211366960 211367278 -41889305 - AluJo SINE Alu -8 304 5 2137 151 87 39 chr2 211367278 211367656 -41888927 + MER34 LTR ERV1 32 439 -103 2154 141 0 0 chr2 211367656 211367953 -41888630 - AluSx SINE Alu -15 297 1 2137 151 87 39 chr2 211367953 211368058 -41888525 + MER34 LTR ERV1 439 538 -4 381 243 65 62 chr2 211368108 211368285 -41888298 - MER92B LTR ERV1 -366 188 1 1088 154 58 46 chr2 211368706 211368966 -41887617 - L1MD3 LINE L1 -2 7993 7731 263 188 101 29 chr2 211369712 211369781 -41886802 + MIR SINE MIR 179 252 -10 355 225 11 0 chr2 211369974 211370063 -41886520 - MIR SINE MIR -53 209 120 2090 144 0 0 chr2 211370078 211370376 -41886207 + AluSg SINE Alu 1 298 -12 1754 166 0 24 chr2 211370667 211370956 -41885627 + AluJb SINE Alu 1 282 -30 2040 151 0 3 chr2 211371346 211371651 -41884932 + AluSx SINE Alu 1 304 -8 504 265 37 47 chr2 211372441 211372739 -41883844 - L1MC5 LINE L1 -48 7913 7619 942 208 22 0 chr2 211372979 211373157 -41883426 - MER5A DNA MER1_type -5 184 3 207 265 82 0 chr2 211373591 211373640 -41882943 + MER91A DNA MER1_type 124 176 -20 433 264 93 7 chr2 211374182 211374322 -41882261 - L2 LINE L2 0 3313 3162 1983 155 7 3 chr2 211374601 211374905 -41881678 - AluSx SINE Alu -7 305 1 209 344 53 8 chr2 211376364 211376495 -41880088 + L2 LINE L2 629 765 -2549 724 253 67 21 chr2 211376868 211377062 -41879521 - MIR SINE MIR -12 250 48 23 0 0 0 chr2 211377121 211377144 -41879439 + AT_rich Low_complexity Low_complexity 1 23 0 273 191 0 0 chr2 211377145 211377192 -41879391 - MER66A LTR ERV1 -142 336 290 243 0 0 0 chr2 211377215 211377242 -41879341 + (TA)n Simple_repeat Simple_repeat 1 27 0 2415 81 3 3 chr2 211377242 211377540 -41879043 - AluSq SINE Alu -11 302 5 2320 56 40 30 chr2 211377938 211378240 -41878343 - AluY SINE Alu -6 305 1 710 192 37 102 chr2 211378307 211378552 -41878031 - L1MA7 LINE L1 -7 6284 6056 455 18 0 0 chr2 211378562 211378619 -41877964 - L1PA6 LINE L1 -5 6149 6093 459 78 0 0 chr2 211379088 211379152 -41877431 + (CA)n Simple_repeat Simple_repeat 1 64 0 575 316 66 18 chr2 211379542 211379814 -41876769 + L1MC/D LINE L1 5501 5785 -2023 268 176 44 77 chr2 211379966 211380057 -41876526 + MIR SINE MIR 56 143 -65 272 308 83 30 chr2 211381203 211381336 -41875247 + MIR3 SINE MIR 18 157 -51 2278 119 0 3 chr2 211381665 211381976 -41874607 + AluSx SINE Alu 1 310 -2 389 293 80 20 chr2 211382137 211382287 -41874296 + MIR3 SINE MIR 43 201 -7 195 42 0 0 chr2 211384303 211384327 -41872256 + (CA)n Simple_repeat Simple_repeat 1 24 0 1725 147 25 25 chr2 211385479 211385764 -41870819 + AluJb SINE Alu 10 294 -18 1155 266 45 11 chr2 211385796 211385840 -41870743 - L1ME3 LINE L1 -2 6164 6123 2152 145 3 3 chr2 211385840 211386150 -41870433 + AluSx SINE Alu 1 310 -2 1155 266 45 11 chr2 211386150 211386501 -41870082 - L1ME3 LINE L1 -43 6123 5766 1852 185 31 31 chr2 211387698 211388088 -41868495 + MLT1B LTR MaLR 1 390 0 1339 250 100 30 chr2 211388808 211389280 -41867303 - MLT1D LTR MaLR 0 505 1 244 264 0 99 chr2 211390215 211390306 -41866277 - MIR3 SINE MIR -5 203 122 246 156 0 0 chr2 211390342 211390387 -41866196 + (CACCAT)n Simple_repeat Simple_repeat 4 48 0 2127 132 21 60 chr2 211390514 211390894 -41865689 + MLT1A1 LTR MaLR 1 365 0 478 292 216 0 chr2 211391053 211391238 -41865345 - MIR SINE MIR -3 259 35 266 309 31 0 chr2 211392291 211392388 -41864195 - MIR SINE MIR -75 187 88 462 219 70 23 chr2 211393157 211393285 -41863298 - MER63 DNA MER1_type -76 760 1 30 27 0 0 chr2 211393605 211393642 -41862941 + AT_rich Low_complexity Low_complexity 1 37 0 2374 78 0 3 chr2 211393652 211393946 -41862637 + AluY SINE Alu 1 293 -18 199 300 17 0 chr2 211394693 211394753 -41861830 - L2 LINE L2 -39 3233 3173 1261 164 27 74 chr2 211394887 211395185 -41861398 - MER58B DNA MER1_type 0 341 58 260 250 18 0 chr2 211395444 211395500 -41861083 - L2 LINE L2 -2 3311 3255 * 356 200 14 0 chr2 211395497 211395567 -41861016 - L2 LINE L2 -235 3078 3008 368 270 155 14 chr2 211395599 211395747 -41860836 - MIR SINE MIR -74 188 20 246 261 14 14 chr2 211395720 211395789 -41860794 + MIR SINE MIR 43 111 -151 * 253 213 21 0 chr2 211395866 211395913 -41860670 - MIR SINE MIR -10 252 205 1017 183 28 64 chr2 211395976 211396316 -41860267 - L2 LINE L2 -223 3090 2763 199 250 0 36 chr2 211396340 211396396 -41860187 + MIR3 SINE MIR 154 207 -1 1107 54 0 0 chr2 211397250 211397380 -41859203 - AluSg/x SINE Alu 0 312 183 888 277 8 32 chr2 211398340 211398589 -41857994 + MIR SINE MIR 15 257 -5 450 0 0 0 chr2 211398621 211398671 -41857912 + (TA)n Simple_repeat Simple_repeat 2 51 0 2178 94 13 28 chr2 211399189 211399507 -41857076 - AluSp SINE Alu 0 313 1 2513 83 0 0 chr2 211399521 211399823 -41856760 - AluSc SINE Alu -7 302 1 555 278 61 25 chr2 211399922 211400120 -41856463 + MIR SINE MIR 58 262 0 614 221 101 0 chr2 211401138 211401287 -41855296 - MIR SINE MIR -70 192 29 317 304 101 7 chr2 211402417 211402555 -41854028 + MIR SINE MIR 34 184 -78 2554 60 0 22 chr2 211402605 211402919 -41853664 + AluY SINE Alu 1 307 -4 538 276 55 0 chr2 211404412 211404557 -41852026 - MIR SINE MIR -62 200 48 400 215 75 11 chr2 211404563 211404656 -41851927 + MIR3 SINE MIR 83 181 -27 180 203 34 51 chr2 211405472 211405531 -41851052 + MIR SINE MIR 89 146 -62 191 284 108 14 chr2 211406226 211406300 -41850283 + MIR SINE MIR 86 167 -41 1830 167 0 19 chr2 211406457 211406595 -41849988 + AluSx SINE Alu 1 140 -172 2271 102 0 0 chr2 211406595 211406890 -41849693 + AluSx SINE Alu 3 297 -15 1830 167 0 19 chr2 211406890 211407063 -41849520 + AluSx SINE Alu 140 306 -6 241 150 0 0 chr2 211407583 211407623 -41848960 - tRNA-Cys-TGC tRNA tRNA -35 40 1 2021 123 3 7 chr2 211407660 211407982 -41848601 - AluSx SINE Alu 0 321 1 23 0 0 0 chr2 211408086 211408109 -41848474 + AT_rich Low_complexity Low_complexity 1 23 0 2505 86 0 0 chr2 211408117 211408421 -41848162 + AluSx SINE Alu 1 304 -8 1207 159 41 10 chr2 211408422 211408617 -41847966 + AluJb SINE Alu 84 284 -28 29 60 0 0 chr2 211408627 211408677 -41847906 + AT_rich Low_complexity Low_complexity 1 50 0 856 274 192 6 chr2 211408677 211409358 -41847225 - L2 LINE L2 0 3313 2494 2100 109 0 3 chr2 211409436 211409746 -41846837 - AluSx SINE Alu 0 309 1 981 206 0 0 chr2 211409942 211410107 -41846476 + FAM SINE Alu 6 170 -15 2143 104 7 20 chr2 211410306 211410604 -41845979 + AluSx SINE Alu 3 296 -16 2432 78 0 16 chr2 211410626 211410932 -41845651 + AluY SINE Alu 1 301 -10 357 308 83 15 chr2 211411457 211411590 -41844993 - MIR3 SINE MIR -48 160 19 963 279 128 36 chr2 211411675 211412120 -41844463 - MLT1K LTR MaLR -76 512 27 180 0 0 0 chr2 211412376 211412396 -41844187 + (GA)n Simple_repeat Simple_repeat 2 21 0 1998 145 3 0 chr2 211412396 211412707 -41843876 + AluSx SINE Alu 1 312 0 1806 183 30 33 chr2 211412804 211413170 -41843413 + MLT1A1 LTR MaLR 1 365 0 192 135 0 0 chr2 211413244 211413281 -41843302 + (CTCA)n Simple_repeat Simple_repeat 3 39 0 333 283 10 1 chr2 211413971 211414080 -41842503 + L1ME1 LINE L1 5463 5574 -600 2221 99 0 3 chr2 211414093 211414397 -41842186 - AluSc SINE Alu -1 308 6 347 316 19 19 chr2 211414448 211414606 -41841977 + L1ME1 LINE L1 5724 5881 -285 573 225 101 75 chr2 211414686 211414913 -41841670 + L2 LINE L2 3077 3309 -4 188 250 102 102 chr2 211415632 211415740 -41840843 - MER5A DNA MER1_type -67 122 15 21 0 0 0 chr2 211416336 211416357 -41840226 + AT_rich Low_complexity Low_complexity 1 21 0 1856 141 0 10 chr2 211417492 211417789 -41838794 - AluJb SINE Alu -18 294 1 1926 128 0 0 chr2 211417978 211418251 -41838332 + AluSx SINE Alu 1 273 -39 2240 78 0 29 chr2 211418380 211418686 -41837897 + AluSq SINE Alu 1 297 -16 563 245 92 62 chr2 211419853 211420114 -41836469 + MIR SINE MIR 2 262 0 21 0 0 0 chr2 211420564 211420585 -41835998 + AT_rich Low_complexity Low_complexity 1 21 0 195 100 0 0 chr2 211420620 211420650 -41835933 + (T)n Simple_repeat Simple_repeat 1 30 0 1756 144 29 32 chr2 211420699 211421012 -41835571 - AluJb SINE Alu 0 312 1 725 129 138 0 chr2 211421163 211421279 -41835304 + FLAM_C SINE Alu 2 133 0 1983 119 13 22 chr2 211422557 211422868 -41833715 + AluSq SINE Alu 6 313 0 1072 126 12 0 chr2 211423143 211423310 -41833273 - AluSg/x SINE Alu -12 298 130 2154 98 0 16 chr2 211423528 211423835 -41832748 + AluSp SINE Alu 1 302 -11 1825 131 0 7 chr2 211423865 211424139 -41832444 + AluJb SINE Alu 25 296 -16 2267 84 3 0 chr2 211424143 211424440 -41832143 + AluSg SINE Alu 1 298 -12 2071 122 0 3 chr2 211424442 211424745 -41831838 + AluSq SINE Alu 1 302 -11 1916 151 3 3 chr2 211426436 211426748 -41829835 + AluSx SINE Alu 1 312 0 2054 142 3 0 chr2 211428028 211428339 -41828244 - AluSx SINE Alu 0 312 1 385 273 8 23 chr2 211428413 211428545 -41828038 + LTR67 LTR ERVL 428 557 0 250 314 59 29 chr2 211428962 211429064 -41827519 - L2 LINE L2 -32 3240 3136 344 258 0 11 chr2 211429532 211429621 -41826962 + MLT1K LTR MaLR 3 90 -498 417 261 13 26 chr2 211429780 211429933 -41826650 + LTR67 LTR ERVL 402 552 -5 414 308 78 9 chr2 211429982 211430168 -41826415 - MIR3 SINE MIR -5 203 1 666 224 0 0 chr2 211430198 211430323 -41826260 + MER58B DNA MER1_type 217 341 0 * 1024 173 56 0 chr2 211430323 211430519 -41826064 - MER58B DNA MER1_type -113 228 22 230 233 0 17 chr2 211430546 211430606 -41825977 + MLT1K LTR MaLR 528 586 -2 187 312 258 11 chr2 211430619 211430712 -41825871 - L2 LINE L2 -14 3258 3143 668 296 88 21 chr2 211430727 211430967 -41825616 - MIR SINE MIR 0 262 7 733 187 8 15 chr2 211431666 211431800 -41824783 + FLAM_A SINE Alu 1 133 0 698 156 30 0 chr2 211431853 211432020 -41824563 + GA-rich Low_complexity Low_complexity 2 173 0 1752 120 28 65 chr2 211432072 211432396 -41824187 + AluSx SINE Alu 1 312 0 1875 241 88 54 chr2 211432407 211433150 -41823433 + HAL1b LINE L1 390 1157 -191 638 231 36 107 chr2 211433192 211433280 -41823303 - MIR SINE MIR 0 262 169 1575 132 23 23 chr2 211433280 211433537 -41823046 - AluJb SINE Alu -40 272 16 638 231 36 107 chr2 211433537 211433729 -41822854 - MIR SINE MIR -93 169 2 184 233 47 0 chr2 211435147 211435190 -41821393 + L2 LINE L2 3215 3259 -13 203 267 174 23 chr2 211435201 211435287 -41821296 + L2 LINE L2 3173 3271 -1 2385 69 3 3 chr2 211435918 211436223 -41820360 + AluY SINE Alu 1 305 -6 752 218 170 10 chr2 211436520 211436726 -41819857 + L3 LINE CR1 1253 1491 -86 610 282 6 19 chr2 211436786 211436942 -41819641 + MIR SINE MIR 32 185 -77 470 196 19 37 chr2 211437139 211437246 -41819337 - MER31A LTR ERV1 -28 457 353 211 167 24 0 chr2 211437370 211437412 -41819171 - L2 LINE L2 -5 3308 3266 2119 112 10 0 chr2 211437438 211437733 -41818850 + AluSx SINE Alu 1 298 -14 780 247 58 40 chr2 211438410 211438633 -41817950 - MIR SINE MIR 0 262 36 1929 104 0 47 chr2 211439076 211439373 -41817210 + AluSx SINE Alu 6 288 -24 691 236 84 26 chr2 211439374 211439565 -41817018 + MIR SINE MIR 59 260 -2 338 331 28 35 chr2 211440288 211440450 -41816133 + MIR3 SINE MIR 15 177 -31 2128 78 0 104 chr2 211440469 211440804 -41815779 + AluSg SINE Alu 1 300 -10 1800 164 10 0 chr2 211440841 211441133 -41815450 - AluJb SINE Alu -17 295 1 1830 122 6 67 chr2 211441263 211441398 -41815185 + AluSx SINE Alu 1 143 -169 7928 19 0 0 chr2 211441398 211442293 -41814290 + L1PA3 LINE L1 5258 6152 -3 1830 122 6 67 chr2 211442293 211442485 -41814098 + AluSx SINE Alu 143 308 -4 184 180 120 20 chr2 211442630 211442680 -41813903 - L2 LINE L2 0 3272 3218 359 288 119 51 chr2 211443898 211444075 -41812508 - MIR3 SINE MIR -5 203 15 189 184 204 51 chr2 211444043 211444141 -41812442 - L3b LINE CR1 -228 1355 1243 * 243 242 72 12 chr2 211444191 211444291 -41812292 + MER5B DNA MER1_type 13 145 -44 1736 147 3 7 chr2 211444437 211444730 -41811853 + AluJo SINE Alu 1 292 -20 1350 234 175 19 chr2 211445107 211445535 -41811048 - MLT1J LTR MaLR -9 502 8 258 176 0 0 chr2 211446028 211446079 -41810504 + CT-rich Low_complexity Low_complexity 2 52 0 294 73 0 0 chr2 211446594 211446635 -41809948 + (CA)n Simple_repeat Simple_repeat 1 41 0 2077 103 40 0 chr2 211446745 211447046 -41809537 + AluSq SINE Alu 1 313 0 384 254 31 109 chr2 211447104 211447297 -41809286 - MER5B DNA MER1_type 0 178 1 190 264 75 0 chr2 211447814 211447867 -41808716 + MIR SINE MIR 161 217 -45 2151 77 0 14 chr2 211447911 211448227 -41808356 + AluY SINE Alu 1 312 0 1023 196 50 0 chr2 211448273 211448472 -41808111 - MER63A DNA MER1_type 0 210 2 2603 30 0 0 chr2 211448490 211448793 -41807790 + AluY SINE Alu 1 303 -8 1045 202 116 129 chr2 211449508 211449964 -41806619 + MLT1E LTR MaLR 1 450 -143 991 186 0 0 chr2 211449988 211450165 -41806418 + FRAM SINE Alu 1 172 -4 234 0 0 0 chr2 211452190 211452216 -41804367 + (TG)n Simple_repeat Simple_repeat 1 26 0 230 160 20 0 chr2 211452216 211452266 -41804317 + GA-rich Low_complexity Low_complexity 2 52 0 345 62 0 0 chr2 211453478 211453526 -41803057 + (GGGGA)n Simple_repeat Simple_repeat 2 49 0 181 0 33 33 chr2 211453609 211453639 -41802944 + (CGG)n Simple_repeat Simple_repeat 1 30 0 5739 186 17 3 chr2 211454234 211455558 -41801025 + L1P4 LINE L1 4157 5502 -663 28 0 0 0 chr2 211456876 211456904 -41799679 + AT_rich Low_complexity Low_complexity 1 28 0 749 191 0 8 chr2 211460121 211460247 -41796336 + FLAM_A SINE Alu 1 125 -8 2265 101 0 0 chr2 211460336 211460644 -41795939 + AluSc SINE Alu 1 308 -1 255 281 0 0 chr2 211460652 211460716 -41795867 - MIR SINE MIR -13 249 186 189 0 0 0 chr2 211465919 211465940 -41790643 + (T)n Simple_repeat Simple_repeat 1 21 0 1469 153 112 19 chr2 211467265 211467533 -41789050 + AluSx SINE Alu 1 293 -19 211 240 0 20 chr2 211468341 211468391 -41788192 - L2 LINE L2 -9 3304 3256 336 242 32 0 chr2 211469060 211469155 -41787428 - MIR SINE MIR -57 205 108 230 232 147 21 chr2 211469848 211469943 -41786640 - MIR SINE MIR -23 239 133 241 135 39 0 chr2 211470731 211470783 -41785800 + (TG)n Simple_repeat Simple_repeat 2 55 0 23 0 0 0 chr2 211471791 211471814 -41784769 + AT_rich Low_complexity Low_complexity 1 23 0 607 206 18 67 chr2 211472346 211472511 -41784072 - MIR SINE MIR -31 231 75 280 353 20 13 chr2 211473601 211473751 -41782832 + L2 LINE L2 2592 2742 -572 220 326 0 0 chr2 211474181 211474227 -41782356 + L2 LINE L2 3204 3249 -23 1925 184 47 49 chr2 211474238 211474394 -41782189 + MLT1C LTR MaLR 17 172 -295 2154 104 11 0 chr2 211474394 211474707 -41781876 + AluSx SINE Alu 1 316 0 1925 184 47 49 chr2 211474707 211475001 -41781582 + MLT1C LTR MaLR 172 467 0 651 181 69 0 chr2 211475106 211475250 -41781333 + FRAM SINE Alu 21 174 -2 517 171 17 8 chr2 211475255 211475372 -41781211 + GA-rich Low_complexity Low_complexity 1 118 0 885 185 52 0 chr2 211475620 211475793 -41780790 - MER3 DNA MER1_type -27 182 1 521 133 12 0 chr2 211477396 211477479 -41779104 - MER53 DNA DNA 0 189 106 478 240 31 57 chr2 211477749 211477901 -41778682 + MIR3 SINE MIR 20 170 -38 410 266 8 55 chr2 211479048 211479176 -41777407 - MER117 DNA MER1_type -1 196 75 1084 196 34 26 chr2 211479186 211479452 -41777131 - L1ME2 LINE L1 -1 6163 5896 456 163 11 43 chr2 211479849 211479941 -41776642 - MLT1L LTR MaLR -53 562 474 251 281 124 43 chr2 211480124 211480334 -41776249 + MIR SINE MIR 20 246 -16 223 98 98 59 chr2 211480303 211480354 -41776229 + L2 LINE L2 3261 3313 0 * 1119 179 162 40 chr2 211480901 211481203 -41775380 + MER2 DNA MER2_type 2 340 -5 727 290 66 39 chr2 211481207 211481571 -41775012 + MLT1L LTR MaLR 72 553 -62 1267 172 9 31 chr2 211481571 211481586 -41774997 - MER58A DNA MER1_type -2196 224 210 2096 137 7 3 chr2 211481586 211481892 -41774691 - AluSx SINE Alu -5 307 1 1267 172 9 31 chr2 211481892 211482103 -41774480 - MER58A DNA MER1_type -2210 210 3 727 290 66 39 chr2 211482103 211482155 -41774428 + MLT1L LTR MaLR 553 602 -13 247 297 0 0 chr2 211482648 211482712 -41773871 - L2 LINE L2 0 3313 3250 2351 104 3 0 chr2 211482924 211483233 -41773350 - AluSg SINE Alu 0 310 1 2191 154 49 62 chr2 211483391 211483903 -41772680 - MLT1D LTR MaLR 0 505 1 239 310 64 43 chr2 211484097 211484284 -41772299 + L1ME4a LINE L1 5869 6059 -62 239 232 0 43 chr2 211485138 211485207 -41771376 + L2 LINE L2 2996 3061 -211 297 183 50 0 chr2 211485389 211485449 -41771134 - L2 LINE L2 -6 3307 3245 343 253 0 23 chr2 211486117 211486204 -41770379 + MIR SINE MIR 36 120 -142 429 251 0 93 chr2 211486204 211486507 -41770076 + L1M4 LINE L1 4896 5163 -983 225 139 0 0 chr2 211488068 211488111 -41768472 + (TC)n Simple_repeat Simple_repeat 1 43 0 546 265 60 6 chr2 211488144 211488310 -41768273 - MIR SINE MIR -60 202 28 2148 116 36 0 chr2 211488682 211488983 -41767600 - AluSq SINE Alu -1 312 1 416 272 195 23 chr2 211488992 211489507 -41767076 + L2 LINE L2 2696 3313 0 369 309 43 0 chr2 211489719 211489858 -41766725 + L2 LINE L2 3116 3260 -12 407 183 8 25 chr2 211489865 211489985 -41766598 + GA-rich Low_complexity Low_complexity 3 120 0 325 305 134 24 chr2 211490051 211490215 -41766368 - MIR3 SINE MIR -1 207 26 1650 164 16 42 chr2 211490743 211491054 -41765529 + AluJo SINE Alu 1 303 -9 239 261 46 0 chr2 211491230 211491295 -41765288 + MLT1K LTR MaLR 519 586 -2 1398 234 66 42 chr2 211491507 211491959 -41764624 - LTR16B LTR ERVL 0 464 2 391 292 13 45 chr2 211492313 211492467 -41764116 + HsTC2 DNA Tc2 4 152 -1746 * 1128 313 140 2 chr2 211492465 211492966 -41763617 + HsTC2 DNA Tc2 317 886 -1012 482 310 26 7 chr2 211493488 211493643 -41762940 - MER117 DNA MER1_type -36 161 4 5685 156 39 56 chr2 211493703 211494155 -41762428 + L1MA4 LINE L1 4094 4552 -1748 1046 164 0 0 chr2 211494155 211494326 -41762257 + FRAM SINE Alu 1 171 -5 5685 156 39 56 chr2 211494326 211494915 -41761668 + L1MA4 LINE L1 4552 5150 -1150 2263 107 0 0 chr2 211494915 211495205 -41761378 + AluSx SINE Alu 1 290 -22 5685 156 39 56 chr2 211495205 211496288 -41760295 + L1MA4 LINE L1 5150 6238 -62 825 217 12 0 chr2 211496288 211496449 -41760134 + FRAM SINE Alu 1 163 -3 5685 156 39 56 chr2 211496449 211496503 -41760080 + L1MA4 LINE L1 6238 6291 -9 238 277 17 0 chr2 211496675 211496794 -41759789 + (TA)n Simple_repeat Simple_repeat 2 122 0 2307 87 0 13 chr2 211496846 211497146 -41759437 + AluY SINE Alu 2 297 -14 964 94 16 0 chr2 211497243 211497371 -41759212 - FRAM SINE Alu -14 162 33 194 292 42 28 chr2 211497576 211497648 -41758935 + L2 LINE L2 3132 3204 -68 230 0 33 0 chr2 211497711 211497741 -41758842 + (TG)n Simple_repeat Simple_repeat 2 32 0 273 29 0 0 chr2 211497841 211497875 -41758708 + (TC)n Simple_repeat Simple_repeat 2 35 0 * 360 0 0 0 chr2 211497874 211497914 -41758669 + (TG)n Simple_repeat Simple_repeat 1 40 0 2353 91 3 0 chr2 211497915 211498212 -41758371 - AluSp SINE Alu -15 298 1 933 129 55 6 chr2 211498264 211498427 -41758156 + MSTB1 LTR MaLR 215 385 -47 495 256 0 8 chr2 211498663 211498780 -41757803 + MER5B DNA MER1_type 3 118 -60 401 161 85 68 chr2 211498791 211498909 -41757674 - MIR SINE MIR -75 187 68 754 166 0 60 chr2 211499208 211499359 -41757224 - FLAM_C SINE Alu 0 143 2 957 89 0 0 chr2 211500234 211500380 -41756203 + (G)n Simple_repeat Simple_repeat 1 146 0 248 256 24 40 chr2 211500384 211500509 -41756074 + (CGGGG)n Simple_repeat Simple_repeat 1 123 0 1316 188 37 11 chr2 211500755 211501026 -41755557 + AluJb SINE Alu 1 278 -34 1294 173 3 117 chr2 211501169 211501493 -41755090 - AluSc SINE Alu -22 287 1 180 300 17 0 chr2 211501908 211501968 -41754615 + MIR SINE MIR 59 119 -89 648 167 0 0 chr2 211503502 211503610 -41752973 + FLAM_A SINE Alu 34 141 -1 1859 122 45 51 chr2 211503736 211504048 -41752535 - AluSx SINE Alu -2 310 1 587 256 0 0 chr2 211504089 211504214 -41752369 - FLAM_A SINE Alu -12 130 6 3852 159 23 53 chr2 211504220 211504539 -41752044 - L1MB3 LINE L1 -33 6150 5823 2397 78 3 0 chr2 211504539 211504832 -41751751 - AluSx SINE Alu -6 306 13 3852 159 23 53 chr2 211504832 211505262 -41751321 - L1MB3 LINE L1 -360 5823 5424 530 264 51 30 chr2 211505662 211505870 -41750713 - MER20B DNA MER1_type 0 219 4 210 270 24 71 chr2 211508316 211508442 -41748141 + MIR SINE MIR 87 206 -56 282 236 0 66 chr2 211509129 211509235 -41747348 + L2 LINE L2 2986 3084 -188 574 293 20 20 chr2 211509625 211509823 -41746760 - MIR SINE MIR -64 198 1 1293 226 136 44 chr2 211509874 211510352 -41746231 + LTR33A LTR ERVL 2 523 0 833 150 8 0 chr2 211510748 211510875 -41745708 + FLAM_C SINE Alu 3 130 -13 872 282 76 28 chr2 211510960 211511344 -41745239 + L1ME4a LINE L1 5458 5867 -254 1992 136 7 3 chr2 211511344 211511645 -41744938 - AluJo SINE Alu -10 302 1 872 282 76 28 chr2 211511645 211511693 -41744890 + L1ME4a LINE L1 5867 5911 -210 602 319 19 5 chr2 211511708 211511915 -41744668 - MIR SINE MIR -7 255 46 1507 91 0 5 chr2 211511970 211512156 -41744427 + AluSx SINE Alu 1 185 -127 486 294 70 5 chr2 211512991 211513178 -41743405 - MIR SINE MIR -52 210 12 2338 104 0 7 chr2 211513468 211513776 -41742807 + AluSp SINE Alu 1 306 -7 393 240 10 10 chr2 211513778 211513878 -41742705 - MIR SINE MIR -8 254 155 3908 151 14 35 chr2 211513879 211514584 -41741999 - L1MB3 LINE L1 -2 6181 5491 2473 75 3 22 chr2 211514584 211514903 -41741680 - AluSp SINE Alu 0 313 1 3908 151 14 35 chr2 211514903 211514930 -41741653 - L1MB3 LINE L1 -692 5491 5465 684 117 10 10 chr2 211514931 211515034 -41741549 + U13 snRNA snRNA 1 103 -1 1326 144 9 0 chr2 211515045 211515274 -41741309 - L1MB3 LINE L1 -692 5488 5258 906 141 7 7 chr2 211515276 211515411 -41741172 + AluJb SINE Alu 148 282 -30 531 191 9 36 chr2 211515433 211515543 -41741040 - L1MB3 LINE L1 -877 5269 5163 893 120 0 0 chr2 211515545 211515670 -41740913 + AluSg/x SINE Alu 176 300 -12 651 175 0 111 chr2 211515670 211515859 -41740724 - L1MB3 LINE L1 -983 5163 4996 287 163 10 22 chr2 211515960 211516026 -41740557 - L1M3 LINE L1 -560 5774 5708 2133 121 10 3 chr2 211516056 211516354 -41740229 - AluSg SINE Alu -10 300 1 243 0 0 0 chr2 211516734 211516761 -41739822 + (T)n Simple_repeat Simple_repeat 1 27 0 432 258 123 13 chr2 211517246 211517401 -41739182 - MER5B DNA MER1_type -3 175 4 216 283 33 11 chr2 211517528 211517620 -41738963 + L2 LINE L2 2711 2804 -510 677 174 0 107 chr2 211517890 211518039 -41738544 - FLAM_A SINE Alu 0 133 1 2313 98 3 0 chr2 211518392 211518689 -41737894 + AluSp SINE Alu 1 298 -15 1902 150 6 19 chr2 211519323 211519637 -41736946 + AluJo SINE Alu 1 310 -2 2128 72 0 8 chr2 211519877 211520140 -41736443 + AluY SINE Alu 35 295 -16 1072 191 5 0 chr2 211520224 211520412 -41736171 - MER5A DNA MER1_type 0 189 1 1312 155 45 100 chr2 211520499 211520809 -41735774 + AluJo SINE Alu 3 295 -17 950 227 22 4 chr2 211520865 211521090 -41735493 + MIR SINE MIR 2 230 -32 2593 78 0 0 chr2 211521091 211521400 -41735183 + AluSc SINE Alu 1 309 0 200 83 0 28 chr2 211522168 211522204 -41734379 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 278 208 368 0 chr2 211522621 211522727 -41733856 + MER5A DNA MER1_type 45 189 0 388 349 12 12 chr2 211522757 211522929 -41733654 + MIR3 SINE MIR 37 208 0 442 352 20 0 chr2 211523769 211523965 -41732618 - MIR SINE MIR -23 239 40 654 125 0 0 chr2 211524065 211524177 -41732406 + (CA)n Simple_repeat Simple_repeat 2 113 0 1733 110 99 0 chr2 211524800 211525073 -41731510 - AluSg SINE Alu -10 300 1 775 234 59 22 chr2 211525073 211525295 -41731288 - MIR SINE MIR -13 249 20 198 309 29 15 chr2 211525389 211525457 -41731126 - MIR3 SINE MIR -25 183 115 195 69 0 0 chr2 211525535 211525564 -41731019 + (CAGTT)n Simple_repeat Simple_repeat 2 30 0 1307 257 45 71 chr2 211526196 211526238 -41730345 + L1ME2 LINE L1 3661 3703 -2443 2371 88 3 0 chr2 211526238 211526545 -41730038 + AluSp SINE Alu 1 308 -5 1307 257 45 71 chr2 211526545 211526914 -41729669 + L1ME2 LINE L1 3703 4049 -2097 2164 120 7 3 chr2 211526914 211527215 -41729368 - AluSq SINE Alu -11 302 1 1307 257 45 71 chr2 211527215 211527490 -41729093 + L1ME2 LINE L1 4049 4330 -1816 1796 206 95 44 chr2 211527550 211527747 -41728836 - L1MC5 LINE L1 -44 7917 7731 887 0 0 0 chr2 211527747 211527845 -41728738 - L1PA3 LINE L1 0 6155 6058 1796 206 95 44 chr2 211527845 211528235 -41728348 - L1MC5 LINE L1 -230 7731 7300 1075 273 118 47 chr2 211528246 211528349 -41728234 + L1ME2 LINE L1 4574 4668 -1496 2313 135 8 45 chr2 211528349 211528728 -41727855 + MLT1A1 LTR MaLR 1 365 0 1075 273 118 47 chr2 211528728 211529152 -41727431 + L1ME2 LINE L1 4668 5060 -1104 2243 109 10 0 chr2 211529152 211529445 -41727138 - AluSx SINE Alu -16 296 1 1075 273 118 47 chr2 211529445 211530184 -41726399 + L1ME2 LINE L1 5060 5935 -229 870 214 146 103 chr2 211530321 211530505 -41726078 - MLT1A1 LTR MaLR 0 365 190 710 195 8 0 chr2 211530505 211530633 -41725950 - FLAM_A SINE Alu -4 129 1 870 214 146 103 chr2 211530633 211530798 -41725785 - MLT1A1 LTR MaLR -175 190 1 2174 122 0 0 chr2 211530865 211531174 -41725409 + AluSx SINE Alu 1 309 0 223 338 0 0 chr2 211532081 211532152 -41724431 + L2 LINE L2 3125 3195 -77 248 238 25 62 chr2 211532152 211532232 -41724351 + L1ME4a LINE L1 5548 5624 -497 2310 84 10 0 chr2 211532942 211533240 -41723343 + AluSp SINE Alu 5 305 -8 1935 143 13 3 chr2 211533491 211533791 -41722792 + AluSx SINE Alu 1 303 -9 373 238 132 72 chr2 211533798 211533927 -41722656 + L1ME4a LINE L1 5690 5810 -311 1861 176 0 0 chr2 211533927 211534217 -41722366 - AluJb SINE Alu -22 290 1 373 238 132 72 chr2 211534217 211534241 -41722342 + L1ME4a LINE L1 5810 5831 -290 1764 180 3 23 chr2 211534241 211534547 -41722036 + AluJo SINE Alu 1 300 -12 373 238 132 72 chr2 211534547 211534741 -41721842 + L1ME4a LINE L1 5831 6059 -62 441 188 218 8 chr2 211534796 211534810 -41721773 - L1MA10 LINE L1 -1 6333 6320 2927 186 83 52 chr2 211534810 211535049 -41721534 - L1ME1 LINE L1 -5 6161 5931 2295 103 13 3 chr2 211535049 211535359 -41721224 - AluSp SINE Alu 0 313 1 2927 186 83 52 chr2 211535359 211535830 -41720753 - L1ME1 LINE L1 -235 5931 5429 1754 176 7 7 chr2 211536085 211536381 -41720202 + AluJb SINE Alu 1 296 -16 1803 102 9 102 chr2 211536416 211536741 -41719842 - AluSx SINE Alu -4 308 14 282 300 126 32 chr2 211536894 211537052 -41719531 - L1ME4a LINE L1 -224 5897 5755 2301 108 0 0 chr2 211537052 211537349 -41719234 + AluSg SINE Alu 1 297 -13 282 300 126 32 chr2 211537349 211537500 -41719083 - L1ME4a LINE L1 -366 5755 5559 2420 83 3 0 chr2 211539180 211539481 -41717102 + AluSx SINE Alu 2 303 -9 587 303 5 72 chr2 211540098 211540260 -41716323 + MER91A DNA MER1_type 1 148 -48 2207 105 0 7 chr2 211540260 211540555 -41716028 - AluSx SINE Alu -19 293 1 587 303 5 72 chr2 211540555 211540600 -41715983 + MER91A DNA MER1_type 148 194 -2 378 279 58 39 chr2 211541489 211541643 -41714940 - MIR SINE MIR -51 211 55 2401 92 0 0 chr2 211542244 211542538 -41714045 - AluSg SINE Alu -16 294 1 282 289 228 7 chr2 211542602 211542751 -41713832 + MER5A DNA MER1_type 7 188 -1 2067 132 14 0 chr2 211542758 211543047 -41713536 + AluJo SINE Alu 1 293 -19 2274 106 0 0 chr2 211543945 211544237 -41712346 + AluSg SINE Alu 1 292 -18 1001 173 0 49 chr2 211544347 211544532 -41712051 + FRAM SINE Alu 1 176 0 455 320 56 15 chr2 211544746 211544943 -41711640 - MIR SINE MIR -57 205 1 2210 109 13 0 chr2 211545400 211545702 -41710881 - AluSp SINE Alu -7 306 1 761 218 23 40 chr2 211545704 211545878 -41710705 - FRAM SINE Alu -14 162 1 279 116 0 0 chr2 211545878 211545921 -41710662 - MER5B DNA MER1_type -130 48 6 197 309 71 0 chr2 211545924 211546008 -41710575 - MIR SINE MIR -21 241 152 240 227 31 52 chr2 211546765 211546862 -41709721 - MIR SINE MIR -10 252 158 2170 130 0 3 chr2 211547708 211548016 -41708567 - AluSg SINE Alu -3 307 1 3504 149 35 31 chr2 211548026 211548184 -41708399 - L1MA5 LINE L1 -2 6298 6142 2320 106 0 13 chr2 211548184 211548495 -41708088 + AluSx SINE Alu 1 307 -5 3504 149 35 31 chr2 211548495 211549012 -41707571 - L1MA5 LINE L1 -158 6142 5620 2651 48 0 3 chr2 211549130 211549442 -41707141 - AluY SINE Alu 0 311 1 408 333 13 0 chr2 211550169 211550319 -41706264 - MIR3 SINE MIR -27 181 30 1039 296 50 41 chr2 211550332 211550527 -41706056 - L2 LINE L2 -17 3296 3104 1789 168 0 13 chr2 211550527 211550830 -41705753 + AluJb SINE Alu 3 301 -11 2355 115 0 0 chr2 211550840 211551145 -41705438 + AluSq SINE Alu 2 306 -7 1039 296 50 41 chr2 211551145 211551421 -41705162 - L2 LINE L2 -217 3096 2810 206 333 50 10 chr2 211552123 211552222 -41704361 + MIR SINE MIR 32 134 -74 1089 140 12 0 chr2 211552231 211552395 -41704188 - AluSg SINE Alu -23 286 121 22 0 0 0 chr2 211552396 211552418 -41704165 + AT_rich Low_complexity Low_complexity 1 22 0 2429 78 7 7 chr2 211552868 211553176 -41703407 - AluSc SINE Alu -1 308 1 2500 67 3 0 chr2 211553653 211553951 -41702632 - AluSp SINE Alu -14 299 1 863 134 31 0 chr2 211554969 211555096 -41701487 - AluSg SINE Alu -179 131 1 1868 143 13 17 chr2 211555590 211555891 -41700692 + AluJo SINE Alu 1 300 -12 24 53 0 0 chr2 211556222 211556260 -41700323 + AT_rich Low_complexity Low_complexity 1 38 0 703 201 178 0 chr2 211556424 211556598 -41699985 - MER3 DNA MER1_type 0 209 5 2495 58 3 3 chr2 211556717 211557012 -41699571 - AluY SINE Alu -15 296 2 2088 160 0 0 chr2 211557014 211557321 -41699262 - AluJb SINE Alu -5 307 1 21 0 0 0 chr2 211557354 211557375 -41699208 + AT_rich Low_complexity Low_complexity 1 21 0 2287 101 0 10 chr2 211558719 211559025 -41697558 + AluSc SINE Alu 1 303 -6 1613 145 3 109 chr2 211560615 211560953 -41695630 - AluSx SINE Alu 0 302 1 21 0 0 0 chr2 211561113 211561134 -41695449 + AT_rich Low_complexity Low_complexity 1 21 0 2382 77 7 7 chr2 211561144 211561444 -41695139 + AluSp SINE Alu 1 300 -13 392 133 27 13 chr2 211561772 211561847 -41694736 + L1MC4 LINE L1 6855 6930 -1112 * 407 236 31 62 chr2 211561841 211562002 -41694581 + L1MC4 LINE L1 7218 7373 -669 813 173 83 6 chr2 211562002 211562158 -41694425 + AluJo SINE Alu 87 254 -58 720 154 0 59 chr2 211562182 211562318 -41694265 - FLAM_A SINE Alu -5 128 1 1916 171 0 13 chr2 211562340 211562513 -41694070 - AluJb SINE Alu -6 306 137 2556 70 0 0 chr2 211562513 211562813 -41693770 - AluSg SINE Alu -10 300 1 1916 171 0 13 chr2 211562813 211562949 -41693634 - AluJb SINE Alu -175 137 1 263 247 65 0 chr2 211562961 211563054 -41693529 + L1MC4 LINE L1 7944 8042 0 231 36 0 0 chr2 211563135 211563163 -41693420 + (CA)n Simple_repeat Simple_repeat 2 29 0 306 239 43 86 chr2 211563907 211564070 -41692513 - MIR SINE MIR -16 246 91 354 125 0 7 chr2 211564343 211564401 -41692182 + AluS SINE Alu 51 100 -202 564 134 0 0 chr2 211564547 211564629 -41691954 + AluSq/x SINE Alu 55 136 -176 1265 118 78 4 chr2 211564631 211564901 -41691682 + AluSx SINE Alu 1 290 -22 2078 97 20 13 chr2 211565194 211565494 -41691089 - AluSq SINE Alu -11 302 1 25 0 0 0 chr2 211566377 211566402 -41690181 + AT_rich Low_complexity Low_complexity 1 25 0 200 143 24 0 chr2 211566514 211566556 -41690027 + CT-rich Low_complexity Low_complexity 1 43 0 2115 119 3 13 chr2 211566598 211566901 -41689682 + AluSx SINE Alu 2 301 -11 2015 123 7 13 chr2 211567479 211567780 -41688803 + AluSx SINE Alu 1 299 -13 2442 93 6 0 chr2 211568632 211568943 -41687640 - AluSq SINE Alu 0 313 1 387 60 0 0 chr2 211569299 211569349 -41687234 + (TGG)n Simple_repeat Simple_repeat 1 50 0 710 263 38 5 chr2 211569375 211569561 -41687022 - MIR SINE MIR -31 231 40 250 296 0 15 chr2 211570395 211570480 -41686103 + L2 LINE L2 2901 2980 -292 1395 101 29 5 chr2 211570488 211570697 -41685886 - L1MB2 LINE L1 -1 6170 5957 1892 152 3 23 chr2 211570952 211571262 -41685321 - AluJb SINE Alu -8 304 1 951 129 0 93 chr2 211571639 211571832 -41684751 + AluSp SINE Alu 137 311 -2 2307 107 0 0 chr2 211571911 211572209 -41684374 - AluSx SINE Alu -14 298 1 765 164 7 21 chr2 211572383 211572523 -41684060 + FLAM_C SINE Alu 6 143 0 2050 121 7 0 chr2 211573324 211573645 -41682938 + AluSx SINE Alu 1 323 0 2259 102 3 3 chr2 211573825 211574128 -41682455 - AluSq SINE Alu -10 303 1 333 304 212 25 chr2 211574164 211574556 -41682027 - L2 LINE L2 0 3272 2808 2258 93 3 3 chr2 211574581 211574870 -41681713 + AluSp SINE Alu 1 289 -24 1988 124 3 24 chr2 211575072 211575363 -41681220 + AluSx SINE Alu 1 285 -27 802 94 0 16 chr2 211575363 211575491 -41681092 + (TA)n Simple_repeat Simple_repeat 2 127 0 2371 68 17 0 chr2 211575502 211575797 -41680786 + AluY SINE Alu 1 300 -11 2006 125 10 30 chr2 211576443 211576747 -41679836 + AluSg SINE Alu 1 298 -12 254 264 132 63 chr2 211576814 211576973 -41679610 + MLT1J2 LTR MaLR 89 258 -192 1242 126 0 0 chr2 211577031 211577206 -41679377 - AluSg/x SINE Alu -5 305 131 881 178 92 0 chr2 211577209 211577372 -41679211 + MER58A DNA MER1_type 47 224 0 1594 103 0 5 chr2 211577450 211577663 -41678920 + AluY SINE Alu 1 212 -99 317 22 44 0 chr2 211577667 211577712 -41678871 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 247 253 48 0 chr2 211577737 211577820 -41678763 + MLT1J2 LTR MaLR 354 440 -10 274 244 26 26 chr2 211577830 211577908 -41678675 + L2 LINE L2 3236 3313 0 933 87 0 0 chr2 211577931 211578046 -41678537 + AluSg SINE Alu 1 115 -195 464 262 47 98 chr2 211578046 211578376 -41678207 - L1ME LINE L1 -314 5807 5505 2310 106 36 20 chr2 211578376 211578734 -41677849 - THE1B LTR MaLR 0 364 1 464 262 47 98 chr2 211578734 211578854 -41677729 - L1ME LINE L1 -616 5505 5380 1846 177 0 10 chr2 211578913 211579218 -41677365 - AluJo SINE Alu -6 306 5 2100 105 14 7 chr2 211579378 211579674 -41676909 - AluSc SINE Alu -10 299 2 2280 116 0 0 chr2 211580652 211580954 -41675629 + AluSg SINE Alu 1 302 -8 2234 106 3 7 chr2 211581304 211581605 -41674978 + AluSx SINE Alu 1 300 -12 2052 134 7 3 chr2 211581647 211581945 -41674638 + AluSg SINE Alu 1 299 -11 344 268 71 27 chr2 211582032 211582215 -41674368 + L1ME LINE L1 5114 5304 -842 3312 177 65 16 chr2 211582220 211582439 -41674144 + L1MB7 LINE L1 4777 4984 -1200 2151 136 0 3 chr2 211582439 211582740 -41673843 - AluJb SINE Alu -12 300 1 3312 177 65 16 chr2 211582740 211583570 -41673013 + L1MB7 LINE L1 4984 5889 -295 660 159 28 0 chr2 211583570 211583677 -41672906 + FLAM_C SINE Alu 2 111 -32 217 138 17 35 chr2 211583678 211583736 -41672847 + GA-rich Low_complexity Low_complexity 2 58 0 1534 130 20 51 chr2 211583753 211583785 -41672798 + L1MB7 LINE L1 5878 5909 -275 2231 121 0 3 chr2 211583785 211584091 -41672492 + AluSx SINE Alu 1 305 -7 1534 130 20 51 chr2 211584091 211584351 -41672232 + L1MB7 LINE L1 5909 6161 -23 1984 104 10 30 chr2 211584371 211584669 -41671914 + AluSq SINE Alu 1 292 -21 353 258 98 35 chr2 211584678 211584920 -41671663 + L1ME LINE L1 5272 5530 -591 2522 48 0 7 chr2 211585083 211585378 -41671205 + AluY SINE Alu 1 293 -18 641 243 62 0 chr2 211586041 211586218 -41670365 - MER5A DNA MER1_type -1 188 1 2407 71 10 0 chr2 211586388 211586682 -41669901 - AluSp SINE Alu -16 297 1 583 167 0 19 chr2 211586834 211586942 -41669641 + FLAM_A SINE Alu 32 137 -5 2517 89 0 0 chr2 211588198 211588511 -41668072 - AluSq SINE Alu 0 313 1 1804 116 34 41 chr2 211588514 211588807 -41667776 - AluSx SINE Alu -9 303 13 251 315 103 36 chr2 211589301 211589349 -41667234 + L2 LINE L2 1705 1748 -1566 2171 109 0 3 chr2 211589349 211589671 -41666912 - AluSg SINE Alu 0 321 1 251 315 103 36 chr2 211589671 211589923 -41666660 + L2 LINE L2 1748 2026 -1288 2448 67 7 0 chr2 211590054 211590354 -41666229 + AluY SINE Alu 1 302 -9 191 360 22 0 chr2 211590545 211590634 -41665949 + L2 LINE L2 2397 2487 -827 964 107 0 0 chr2 211590682 211590804 -41665779 - FLAM_C SINE Alu -9 134 13 1876 153 17 0 chr2 211590913 211591200 -41665383 + AluJb SINE Alu 1 292 -20 21 0 0 0 chr2 211591200 211591221 -41665362 + AT_rich Low_complexity Low_complexity 1 21 0 1948 94 72 11 chr2 211591341 211591617 -41664966 + AluSg1 SINE Alu 1 293 -16 214 361 120 8 chr2 211591899 211592032 -41664551 + L2 LINE L2 3116 3263 -9 1521 122 61 0 chr2 211592927 211593156 -41663427 + AluSx SINE Alu 1 243 -69 2415 79 3 7 chr2 211593262 211593565 -41663018 - AluSx SINE Alu -10 302 1 1187 93 0 0 chr2 211593755 211593906 -41662677 + AluSp SINE Alu 148 298 -15 2292 87 0 23 chr2 211593911 211594210 -41662373 + AluY SINE Alu 1 292 -19 22 0 0 0 chr2 211594210 211594232 -41662351 + AT_rich Low_complexity Low_complexity 1 22 0 499 188 36 9 chr2 211594233 211594345 -41662238 + L1MC5 LINE L1 7697 7811 -150 23 54 0 0 chr2 211594389 211594426 -41662157 + AT_rich Low_complexity Low_complexity 1 37 0 2315 98 7 0 chr2 211594432 211594728 -41661855 + AluY SINE Alu 1 298 -13 1470 121 147 11 chr2 211594894 211595159 -41661424 - AluSg SINE Alu -9 301 1 246 317 163 8 chr2 211595506 211595629 -41660954 + MLT1J LTR MaLR 1 142 -369 686 220 38 41 chr2 211595940 211596310 -41660273 + L1ME3A LINE L1 5730 6170 0 2023 92 7 63 chr2 211596594 211596740 -41659843 + AluSp SINE Alu 6 128 -185 2110 95 42 3 chr2 211596740 211597024 -41659559 + AluSc SINE Alu 1 295 -14 2023 92 7 63 chr2 211597024 211597180 -41659403 + AluSp SINE Alu 128 291 -22 21 0 0 0 chr2 211597180 211597201 -41659382 + AT_rich Low_complexity Low_complexity 1 21 0 2032 131 7 0 chr2 211597298 211597588 -41658995 + AluSx SINE Alu 1 292 -20 226 267 17 0 chr2 211598237 211598297 -41658286 + L2 LINE L2 3249 3309 -4 2178 110 3 0 chr2 211598425 211598717 -41657866 + AluSx SINE Alu 8 300 -12 967 214 182 73 chr2 211599215 211599710 -41656873 + MLT1H1 LTR MaLR 5 553 -2 24 0 0 0 chr2 211600112 211600136 -41656447 + AT_rich Low_complexity Low_complexity 1 24 0 1884 124 36 7 chr2 211600141 211600415 -41656168 + AluSx SINE Alu 14 295 -17 1159 74 7 13 chr2 211600604 211600753 -41655830 + AluSg SINE Alu 2 149 -161 180 0 0 0 chr2 211600775 211600795 -41655788 + (A)n Simple_repeat Simple_repeat 1 20 0 1981 133 55 0 chr2 211600813 211601106 -41655477 - AluSx SINE Alu -3 309 1 1655 168 35 7 chr2 211601469 211601754 -41654829 - AluJo SINE Alu -19 293 1 2283 103 0 0 chr2 211601767 211602059 -41654524 - AluSg SINE Alu -17 293 2 1957 150 66 24 chr2 211602092 211602518 -41654065 - Charlie1b DNA MER1_type 0 523 80 2164 72 7 49 chr2 211603058 211603365 -41653218 + AluSg SINE Alu 1 294 -16 2439 51 0 7 chr2 211605108 211605404 -41651179 + AluSq SINE Alu 1 294 -19 469 209 108 44 chr2 211606026 211606184 -41650399 + L1MB8 LINE L1 4784 4951 -1195 774 174 0 96 chr2 211606273 211606451 -41650132 + FRAM SINE Alu 1 161 -5 2188 107 0 29 chr2 211606452 211606762 -41649821 + AluSx SINE Alu 4 304 -8 746 180 0 0 chr2 211606762 211606884 -41649699 + L1MB8 LINE L1 5435 5556 -618 784 186 29 41 chr2 211606890 211607062 -41649521 + FAM SINE Alu 1 170 -15 641 156 0 0 chr2 211607064 211607173 -41649410 + L1MB8 LINE L1 5567 5675 -509 716 220 46 35 chr2 211607175 211607308 -41649275 + FRAM SINE Alu 2 139 -173 1769 176 134 11 chr2 211607308 211607689 -41648894 + MSTA LTR MaLR 1 428 0 716 220 46 35 chr2 211607689 211607728 -41648855 + FRAM SINE Alu 139 176 0 833 169 82 22 chr2 211607781 211607964 -41648619 + L1MB8 LINE L1 5980 6173 -5 2328 76 3 20 chr2 211608138 211608442 -41648141 - AluSg SINE Alu -11 299 1 230 150 50 88 chr2 211608462 211608542 -41648041 - L1M3de LINE L1 -4827 1826 1750 916 157 208 5 chr2 211608944 211609141 -41647442 - L1MC1 LINE L1 -1 6332 6096 2377 97 0 6 chr2 211609141 211609452 -41647131 - AluSx SINE Alu -3 309 1 1546 171 14 27 chr2 211609460 211609753 -41646830 - AluJb SINE Alu -23 289 1 1048 219 19 37 chr2 211609753 211610030 -41646553 - L1M4 LINE L1 -1489 4657 4385 2358 82 0 10 chr2 211610030 211610356 -41646227 - AluSx SINE Alu 0 312 1 1048 219 19 37 chr2 211610356 211610402 -41646181 - L1M4 LINE L1 -1761 4385 4340 335 265 26 40 chr2 211610776 211610927 -41645656 + MER5A DNA MER1_type 2 150 -39 402 69 0 0 chr2 211610980 211611038 -41645545 + (TTGG)n Simple_repeat Simple_repeat 2 59 0 2183 108 0 0 chr2 211611038 211611319 -41645264 - AluSc SINE Alu -28 281 1 258 143 82 0 chr2 211611369 211611418 -41645165 + Alu SINE Alu 1 53 -249 371 98 0 0 chr2 211611519 211611570 -41645013 - Alu SINE Alu -250 51 1 1565 170 3 39 chr2 211611689 211612001 -41644582 + AluSx SINE Alu 3 303 -9 798 173 0 0 chr2 211612081 211612214 -41644369 - FLAM_C SINE Alu 0 133 1 741 185 8 0 chr2 211612292 211612422 -41644161 + L1MD3 LINE L1 6887 7017 -978 1238 167 5 5 chr2 211612422 211612637 -41643946 + MER2 DNA MER2_type 1 215 -130 578 149 56 0 chr2 211612654 211612761 -41643822 + AluY SINE Alu 7 119 -192 2280 98 7 0 chr2 211613049 211613346 -41643237 - AluSx SINE Alu -13 299 1 336 196 33 0 chr2 211613348 211613440 -41643143 - L1MC5 LINE L1 -177 7784 7690 2234 77 35 0 chr2 211613868 211614153 -41642430 - AluY SINE Alu -16 295 1 2291 63 13 13 chr2 211614552 211614855 -41641728 + AluY SINE Alu 1 303 -8 1533 205 7 10 chr2 211615053 211615341 -41641242 - AluJo SINE Alu -22 290 4 1928 127 3 44 chr2 211615416 211615731 -41640852 - AluSx SINE Alu -10 302 1 306 192 68 14 chr2 211615756 211615829 -41640754 - HsTC2 DNA Tc2 -1811 87 11 1914 102 48 34 chr2 211615904 211616197 -41640386 - AluSg SINE Alu -13 297 1 1356 179 133 4 chr2 211616240 211616503 -41640080 - AluJb SINE Alu -15 297 1 533 182 150 47 chr2 211616638 211616912 -41639671 + L1ME1 LINE L1 5814 6094 -68 330 265 41 0 chr2 211617063 211617161 -41639422 - Charlie5 DNA MER1_type -2506 106 5 1068 150 6 0 chr2 211617236 211617409 -41639174 - AluSg/x SINE Alu -2 310 137 1570 129 99 23 chr2 211617555 211617852 -41638731 + AluSg SINE Alu 1 317 0 1020 131 26 0 chr2 211617852 211618005 -41638578 + AluJb SINE Alu 134 290 -22 1514 93 25 0 chr2 211618097 211618301 -41638282 + AluSp SINE Alu 1 209 -104 2558 69 7 0 chr2 211618453 211618758 -41637825 - AluY SINE Alu 0 311 5 444 156 39 0 chr2 211618801 211618878 -41637705 - MER116 DNA Mariner 0 80 1 780 299 50 47 chr2 211618884 211619248 -41637335 - MLT1J2 LTR MaLR -53 397 33 2227 108 0 0 chr2 211619340 211619627 -41636956 - AluSx SINE Alu -25 287 1 277 303 22 11 chr2 211619678 211619767 -41636816 - MIR SINE MIR -112 150 61 646 248 0 0 chr2 211620244 211620377 -41636206 - FLAM_A SINE Alu 0 133 1 228 310 74 54 chr2 211620828 211621031 -41635552 - L1MC5 LINE L1 -53 7908 7702 2129 109 3 3 chr2 211621032 211621339 -41635244 + AluSp SINE Alu 1 307 0 628 77 12 1 chr2 211621353 211621613 -41634970 + AluSg SINE Alu 8 301 -8 338 286 54 24 chr2 211621648 211621816 -41634767 - L1MC5 LINE L1 -288 7673 7501 951 187 39 65 chr2 211621819 211622049 -41634534 - MER58A DNA MER1_type 0 224 1 35 33 0 17 chr2 211622086 211622123 -41634460 + AT_rich Low_complexity Low_complexity 1 38 -21 2583 38 0 0 chr2 211622123 211622410 -41634173 - AluY SINE Alu -24 287 1 35 33 0 17 chr2 211622410 211622432 -41634151 + AT_rich Low_complexity Low_complexity 38 59 0 1479 187 0 30 chr2 211622614 211622913 -41633670 - AluJb SINE Alu -1 311 22 1627 166 47 11 chr2 211623040 211623318 -41633265 - AluJb SINE Alu -24 288 1 223 132 19 57 chr2 211623568 211623621 -41632962 + A-rich Low_complexity Low_complexity 4 54 0 2470 91 0 3 chr2 211623896 211624205 -41632378 + AluSq SINE Alu 1 308 -5 996 158 12 6 chr2 211624214 211624378 -41632205 + FRAM SINE Alu 1 165 -11 459 279 128 5 chr2 211624411 211624630 -41631953 + L1MC/D LINE L1 5455 5700 -421 225 94 0 0 chr2 211624642 211624674 -41631909 + (TA)n Simple_repeat Simple_repeat 1 32 0 251 224 0 0 chr2 211624740 211624789 -41631794 + L1MC/D LINE L1 5853 5901 -1907 1754 161 10 10 chr2 211624878 211625170 -41631413 + AluJb SINE Alu 13 304 -8 1590 167 50 3 chr2 211625290 211625572 -41631011 - AluJb SINE Alu -17 295 1 2349 85 3 3 chr2 211625600 211625895 -41630688 + AluSp SINE Alu 1 295 -18 1377 203 100 0 chr2 211627000 211627310 -41629273 - MER58B DNA MER1_type 0 341 1 2191 120 3 10 chr2 211627324 211627632 -41628951 - AluSx SINE Alu -6 306 1 295 253 70 70 chr2 211627788 211627881 -41628702 - L3b LINE CR1 -218 1365 1273 2217 112 0 7 chr2 211627881 211628184 -41628399 - AluSg SINE Alu -9 301 1 295 253 70 70 chr2 211628184 211628347 -41628236 - L3b LINE CR1 -309 1274 1109 2333 108 0 10 chr2 211628712 211629026 -41627557 - AluSx SINE Alu -1 311 1 2014 148 0 7 chr2 211629035 211629340 -41627243 - AluJb SINE Alu -9 303 1 669 184 70 19 chr2 211629346 211629504 -41627079 - FRAM SINE Alu -14 162 1 492 178 0 10 chr2 211629533 211629634 -41626949 - L1ME4a LINE L1 -71 6050 5951 2174 113 0 0 chr2 211629638 211629975 -41626608 - AluSx SINE Alu 0 337 1 1964 155 0 0 chr2 211630263 211630559 -41626024 + AluJo SINE Alu 1 296 -16 510 304 79 4 chr2 211631005 211631232 -41625351 - MIR SINE MIR -1 261 18 378 331 74 67 chr2 211631722 211632021 -41624562 - L2 LINE L2 -3 3269 2969 1877 173 0 16 chr2 211632043 211632355 -41624228 + AluJb SINE Alu 1 307 -5 338 0 24 0 chr2 211632469 211632511 -41624072 + (TG)n Simple_repeat Simple_repeat 2 44 0 824 161 7 14 chr2 211632511 211632647 -41623936 - FRAM SINE Alu -158 154 18 394 339 184 12 chr2 211632674 211633326 -41623257 - L2 LINE L2 -1606 1708 945 504 282 13 19 chr2 211633360 211633516 -41623067 + L2 LINE L2 2519 2673 -641 2274 121 0 0 chr2 211633537 211633835 -41622748 - AluSx SINE Alu -14 298 1 1862 175 57 110 chr2 211633863 211634036 -41622547 + L1MC4 LINE L1 7392 7573 -469 1501 180 66 11 chr2 211634036 211634308 -41622275 + AluJb SINE Alu 1 287 -25 1862 175 57 110 chr2 211634308 211634403 -41622180 + L1MC4 LINE L1 7573 7671 -371 2350 107 0 0 chr2 211634403 211634712 -41621871 + AluSc SINE Alu 1 309 0 1862 175 57 110 chr2 211634712 211635069 -41621514 + L1MC4 LINE L1 7671 7985 -57 647 306 32 28 chr2 211635085 211635462 -41621121 + L2 LINE L2 2702 3083 -230 2002 108 14 10 chr2 211635644 211635941 -41620642 + AluSq SINE Alu 1 298 -15 2294 91 3 7 chr2 211636069 211636365 -41620218 + AluSx SINE Alu 1 295 -17 2293 93 7 10 chr2 211636418 211636720 -41619863 + AluSq SINE Alu 1 301 -12 202 143 29 0 chr2 211636971 211637006 -41619577 + GA-rich Low_complexity Low_complexity 1 36 0 2074 127 17 0 chr2 211637532 211637823 -41618760 + AluSx SINE Alu 1 296 -16 2462 70 3 0 chr2 211637893 211638193 -41618390 + AluSp SINE Alu 2 302 -11 1072 158 110 8 chr2 211638199 211638445 -41618138 - L1MC3 LINE L1 -7 7778 7508 * 1254 172 39 4 chr2 211638443 211638676 -41617907 - L1MD3 LINE L1 -352 7643 7403 225 211 10 173 chr2 211638678 211638782 -41617801 - MLT1F1 LTR MaLR -445 122 36 1712 156 18 4 chr2 211638817 211639093 -41617490 - AluJb SINE Alu -31 281 2 2312 118 0 0 chr2 211639106 211639412 -41617171 - AluSx SINE Alu -6 306 1 1532 156 60 21 chr2 211639489 211639771 -41616812 + AluJo SINE Alu 1 293 -19 1456 90 5 0 chr2 211639874 211640062 -41616521 + AluSp SINE Alu 115 303 -10 1846 177 0 10 chr2 211640222 211640527 -41616056 + AluJo SINE Alu 5 306 -6 464 262 47 98 chr2 211640586 211640706 -41615877 + L1ME LINE L1 5380 5505 -616 2310 106 36 20 chr2 211640706 211641064 -41615519 + THE1B LTR MaLR 1 364 0 464 262 47 98 chr2 211641064 211641394 -41615189 + L1ME LINE L1 5505 5807 -314 933 87 0 0 chr2 211641394 211641509 -41615074 - AluSg SINE Alu -195 115 1 274 244 26 26 chr2 211641532 211641610 -41614973 - L2 LINE L2 0 3313 3236 247 253 48 0 chr2 211641620 211641703 -41614880 - MLT1J2 LTR MaLR -10 440 354 317 22 44 0 chr2 211641728 211641773 -41614810 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1594 103 0 5 chr2 211641777 211641990 -41614593 - AluY SINE Alu -99 212 1 881 178 92 0 chr2 211642068 211642231 -41614352 - MER58A DNA MER1_type 0 224 47 1242 126 0 0 chr2 211642234 211642409 -41614174 + AluSg/x SINE Alu 133 307 -5 254 264 132 63 chr2 211642467 211642626 -41613957 - MLT1J2 LTR MaLR -192 258 89 2006 125 10 30 chr2 211642693 211642997 -41613586 - AluSg SINE Alu -12 298 1 2389 68 17 0 chr2 211643643 211643938 -41612645 - AluY SINE Alu -11 300 1 3136 123 24 2 chr2 211644250 211644705 -41611878 - LTR9B LTR ERV1 -179 465 1 2310 108 0 3 chr2 211644733 211645040 -41611543 + AluSx SINE Alu 1 306 -6 1118 165 49 71 chr2 211645100 211645284 -41611299 + MLT1D LTR MaLR 1 188 -317 2487 64 3 3 chr2 211645284 211645582 -41611001 + AluSp SINE Alu 1 298 -15 2248 116 0 3 chr2 211645591 211645901 -41610682 + AluSc SINE Alu 1 309 0 1118 165 49 71 chr2 211645901 211645980 -41610603 + MLT1D LTR MaLR 196 234 -271 1832 224 17 8 chr2 211645980 211646338 -41610245 - MLT1A2 LTR MaLR -2 372 12 972 195 25 20 chr2 211646336 211646536 -41610047 + MLT1D LTR MaLR 305 505 0 * 2025 217 126 42 chr2 211646544 211647062 -41609521 + MER50 LTR ERV1 10 599 -135 2007 137 0 0 chr2 211647062 211647368 -41609215 + AluSg SINE Alu 3 308 0 2025 217 126 42 chr2 211647368 211647515 -41609068 + MER50 LTR ERV1 599 732 -2 585 186 0 0 chr2 211647577 211647674 -41608909 + AluJo SINE Alu 2 98 -214 523 97 36 12 chr2 211647674 211647764 -41608819 - THE1B LTR MaLR 0 355 267 1583 51 10 0 chr2 211647765 211647961 -41608622 + L1PA5 LINE L1 5931 6128 -26 185 0 40 0 chr2 211647964 211647989 -41608594 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 1693 122 73 24 chr2 211647989 211648276 -41608307 - THE1B LTR MaLR -63 301 1 863 211 20 39 chr2 211648276 211648318 -41608265 + AluJo SINE Alu 94 135 -177 2134 119 0 3 chr2 211648318 211648626 -41607957 + AluSq SINE Alu 2 308 0 863 211 20 39 chr2 211648626 211648786 -41607797 + AluJo SINE Alu 135 293 -19 2172 107 0 0 chr2 211648883 211649189 -41607394 - AluSc SINE Alu 0 306 1 346 151 0 0 chr2 211649214 211649267 -41607316 - Alu SINE Alu -3 299 247 766 154 0 31 chr2 211649347 211649477 -41607106 - FLAM_C SINE Alu -7 126 1 25 0 0 0 chr2 211649495 211649520 -41607063 + AT_rich Low_complexity Low_complexity 1 25 0 537 92 13 0 chr2 211649520 211649596 -41606987 - AluSp/q SINE Alu -15 298 222 2345 46 3 11 chr2 211649618 211649950 -41606633 - AluY SINE Alu 0 330 1 593 125 11 0 chr2 211650027 211650115 -41606468 - AluJb SINE Alu -18 294 206 1153 158 14 37 chr2 211650136 211650351 -41606232 + AluSg/x SINE Alu 83 292 -18 354 221 43 94 chr2 211650351 211650605 -41605978 - L1MEc LINE L1 -4747 1649 1409 1145 141 28 6 chr2 211650686 211650863 -41605720 - AluJo SINE Alu -131 181 1 384 301 82 47 chr2 211650866 211651208 -41605375 - L1MEc LINE L1 -5087 1118 765 2490 75 3 0 chr2 211651281 211651588 -41604995 + AluY SINE Alu 1 308 -3 2162 102 10 0 chr2 211651924 211652218 -41604365 - AluSq SINE Alu -16 297 1 2376 90 10 3 chr2 211652225 211652535 -41604048 - AluSx SINE Alu 0 312 1 2523 78 3 0 chr2 211652680 211652989 -41603594 + AluSp SINE Alu 1 310 -3 651 194 32 8 chr2 211653670 211653794 -41602789 + FLAM_A SINE Alu 1 127 -6 329 281 111 23 chr2 211654079 211654250 -41602333 + L1ME LINE L1 5522 5707 -414 2356 93 3 0 chr2 211654578 211654879 -41601704 + AluSq SINE Alu 1 302 -11 282 237 172 0 chr2 211655233 211655326 -41601257 + MER5A DNA MER1_type 1 109 -80 1582 144 171 9 chr2 211655388 211655722 -41600861 + Tigger2a DNA MER2_type 47 434 0 773 151 8 16 chr2 211655737 211655863 -41600720 - AluJb SINE Alu -23 289 165 285 211 43 130 chr2 211656008 211656169 -41600414 + MER5A DNA MER1_type 36 182 -7 23 68 0 0 chr2 211657442 211657486 -41599097 + AT_rich Low_complexity Low_complexity 1 44 0 204 206 0 0 chr2 211657951 211657985 -41598598 + polypyrimidine Low_complexity Low_complexity 3 36 0 230 113 0 81 chr2 211658393 211658455 -41598128 + (TTC)n Simple_repeat Simple_repeat 1 57 0 364 293 153 27 chr2 211658751 211658973 -41597610 + MIR SINE MIR 13 262 0 2319 112 0 6 chr2 211658988 211659302 -41597281 + AluSx SINE Alu 1 312 0 308 283 141 78 chr2 211659356 211659738 -41596845 - L2 LINE L2 -40 3273 2868 2154 115 0 0 chr2 211659895 211660174 -41596409 + AluSg SINE Alu 1 279 -31 2299 92 13 0 chr2 211662120 211662423 -41594160 + AluSc SINE Alu 1 307 -2 361 313 0 9 chr2 211662437 211662552 -41594031 - L1ME LINE L1 -475 5646 5533 2046 73 73 7 chr2 211662735 211663007 -41593576 - AluSq SINE Alu -23 290 1 825 161 111 10 chr2 211663162 211663361 -41593222 + L1MA8 LINE L1 6070 6288 -3 23 0 0 0 chr2 211664222 211664245 -41592338 + AT_rich Low_complexity Low_complexity 1 23 0 208 344 44 0 chr2 211664245 211664335 -41592248 - L3 LINE CR1 -231 1346 1253 2427 60 0 0 chr2 211664343 211664662 -41591921 + AluY SINE Alu 1 319 0 285 200 138 25 chr2 211664793 211664873 -41591710 + MIR SINE MIR 97 185 -77 2046 104 7 27 chr2 211664875 211665172 -41591411 + AluSg SINE Alu 1 291 -19 1348 206 243 42 chr2 211666144 211666396 -41590187 + MER44D DNA MER2_type 2 202 -2285 2315 84 3 14 chr2 211666396 211666693 -41589890 - AluSg1 SINE Alu -15 294 1 1348 206 243 42 chr2 211666693 211666897 -41589686 + MER44D DNA MER2_type 202 605 0 2054 110 0 64 chr2 211667017 211667343 -41589240 - AluSq SINE Alu -8 305 1 2036 97 38 14 chr2 211667501 211667789 -41588794 + AluSx SINE Alu 1 295 -17 2004 104 0 0 chr2 211668760 211669020 -41587563 - AluSx SINE Alu -52 260 1 1600 161 0 55 chr2 211669043 211669317 -41587266 - AluJb SINE Alu -53 259 1 891 82 0 49 chr2 211669399 211669521 -41587062 - AluSp/q SINE Alu -25 288 173 381 93 0 0 chr2 211669522 211669576 -41587007 + (CA)n Simple_repeat Simple_repeat 1 54 0 306 239 11 33 chr2 211669577 211669669 -41586914 + L1MC4 LINE L1 6614 6703 -1339 * 340 173 111 12 chr2 211669589 211669670 -41586913 - L1MC4 LINE L1 -1339 6703 6615 315 219 52 21 chr2 211669690 211669786 -41586797 - L1MC4 LINE L1 -1337 6705 6607 304 264 23 0 chr2 211669708 211669795 -41586788 + L1MC4 LINE L1 6614 6702 -1340 * 2242 80 14 0 chr2 211669811 211670097 -41586486 - AluSg SINE Alu -20 290 1 885 249 89 18 chr2 211672075 211672356 -41584227 + MLT1J2 LTR MaLR 1 301 -149 444 143 0 0 chr2 211672356 211672419 -41584164 - AluSc SINE Alu -107 202 140 292 244 13 0 chr2 211672423 211672501 -41584082 + MIR3 SINE MIR 115 193 -15 813 119 0 8 chr2 211672519 211672653 -41583930 - FLAM_C SINE Alu 0 133 1 192 152 0 0 chr2 211673330 211673363 -41583220 + CT-rich Low_complexity Low_complexity 1 33 0 1543 167 98 4 chr2 211673363 211673823 -41582760 - AluJb SINE Alu 0 312 1 1073 222 23 12 chr2 211674197 211674462 -41582121 + LTR40b LTR ERVL 169 436 -29 520 246 40 0 chr2 211674638 211674764 -41581819 - L2 LINE L2 -4 3309 3179 215 30 0 30 chr2 211674782 211674815 -41581768 + (TA)n Simple_repeat Simple_repeat 1 32 0 1225 142 13 26 chr2 211674841 211675014 -41581569 - AluSg/x SINE Alu -5 307 133 261 0 0 0 chr2 211675014 211675043 -41581540 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2124 84 0 57 chr2 211675043 211675340 -41581243 - AluSc SINE Alu -29 280 1 1225 142 13 26 chr2 211675340 211675391 -41581192 - AluSg/x SINE Alu -177 135 85 2056 135 3 13 chr2 211675457 211675593 -41580990 + AluSx SINE Alu 1 137 -175 2261 108 3 19 chr2 211675593 211675909 -41580674 + AluSp SINE Alu 1 311 -2 2056 135 3 13 chr2 211675909 211676076 -41580507 + AluSx SINE Alu 137 301 -11 2299 97 0 3 chr2 211676081 211676391 -41580192 + AluSp SINE Alu 1 309 0 2578 58 0 0 chr2 211676602 211676911 -41579672 + AluY SINE Alu 1 309 -2 2129 82 29 0 chr2 211677074 211677394 -41579189 + AluY SINE Alu 1 328 0 239 338 47 27 chr2 211677413 211677561 -41579022 - L2 LINE L2 -181 3091 2941 2394 70 20 17 chr2 211677616 211677916 -41578667 + AluSc SINE Alu 1 301 -8 265 187 0 0 chr2 211678271 211678317 -41578266 - THE1B LTR MaLR 0 364 307 2619 51 0 3 chr2 211678317 211678629 -41577954 + AluY SINE Alu 1 311 0 615 130 0 0 chr2 211678659 211678751 -41577832 - MSTA LTR MaLR -336 92 1 204 266 64 43 chr2 211678823 211678917 -41577666 - MIR SINE MIR -73 135 40 1862 143 19 26 chr2 211679472 211679642 -41576941 - AluJo SINE Alu -6 306 136 216 0 0 0 chr2 211679642 211679666 -41576917 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2037 115 4 7 chr2 211679668 211679947 -41576636 - AluSc SINE Alu -31 278 1 1862 143 19 26 chr2 211679947 211680080 -41576503 - AluJo SINE Alu -177 135 2 835 191 0 24 chr2 211680133 211680301 -41576282 - FRAM SINE Alu -9 167 4 452 259 29 80 chr2 211680432 211680706 -41575877 - HAL1b LINE L1 -765 583 324 316 215 49 49 chr2 211680704 211680848 -41575735 - L1ME4a LINE L1 -6 6115 5972 * 26 82 0 0 chr2 211680858 211680919 -41575664 + AT_rich Low_complexity Low_complexity 1 61 0 465 246 16 16 chr2 211680966 211681092 -41575491 - MIR SINE MIR 0 262 137 1039 165 0 0 chr2 211681223 211681387 -41575196 - AluSg/x SINE Alu -5 305 142 2296 106 10 0 chr2 211681394 211681697 -41574886 - AluSq SINE Alu -7 306 1 345 328 0 39 chr2 211681698 211681732 -41574851 - MIR SINE MIR -112 150 116 1483 207 11 21 chr2 211681732 211682061 -41574522 + AluJb SINE Alu 1 326 0 345 328 0 39 chr2 211682061 211682151 -41574432 - MIR SINE MIR -146 116 28 1042 48 0 0 chr2 211682151 211682277 -41574306 + AluY SINE Alu 178 303 -8 1630 274 105 19 chr2 211682428 211682896 -41573687 + MLT1G1 LTR MaLR 86 593 -2 338 172 16 0 chr2 211683190 211683254 -41573329 + MIR SINE MIR 168 232 -30 2157 131 0 10 chr2 211683575 211683880 -41572703 - AluSx SINE Alu -10 302 1 4064 179 58 9 chr2 211683883 211684347 -41572236 + L1MB7 LINE L1 5329 5851 -333 2228 104 13 3 chr2 211684347 211684646 -41571937 + AluSg SINE Alu 1 302 -8 4064 179 58 9 chr2 211684646 211684989 -41571594 + L1MB7 LINE L1 5851 6176 -8 1783 68 120 49 chr2 211685204 211685501 -41571082 + AluSp SINE Alu 1 316 0 21 0 0 0 chr2 211685642 211685663 -41570920 + AT_rich Low_complexity Low_complexity 1 21 0 1601 106 173 0 chr2 211686065 211686319 -41570264 - AluSx SINE Alu -4 298 1 1985 166 0 3 chr2 211686441 211686754 -41569829 - AluJb SINE Alu 0 312 1 27 29 0 0 chr2 211686768 211686802 -41569781 + AT_rich Low_complexity Low_complexity 1 34 0 314 229 52 31 chr2 211686988 211687084 -41569499 - MIR SINE MIR -33 229 132 2050 125 30 3 chr2 211687342 211687645 -41568938 - AluSx SINE Alu -1 311 1 560 176 0 10 chr2 211687765 211687867 -41568716 - FAM SINE Alu -72 113 13 770 159 0 43 chr2 211688063 211688201 -41568382 + FLAM_C SINE Alu 1 132 -1 537 170 9 45 chr2 211688468 211688580 -41568003 + FLAM_A SINE Alu 18 125 -17 23 0 0 0 chr2 211688580 211688603 -41567980 + AT_rich Low_complexity Low_complexity 1 23 0 2062 105 36 0 chr2 211689015 211689315 -41567268 - AluSp SINE Alu 0 310 1 2049 177 43 28 chr2 211689340 211689878 -41566705 - MLT2A2 LTR ERVL 0 554 4 680 193 0 75 chr2 211689878 211690039 -41566544 - FAM SINE Alu -31 154 6 1553 156 29 31 chr2 211690039 211690166 -41566417 - L1MC/D LINE L1 -582 5602 5476 2230 96 3 13 chr2 211690166 211690468 -41566115 - AluSp SINE Alu -14 299 1 1553 156 29 31 chr2 211690468 211690624 -41565959 - L1MC/D LINE L1 -708 5476 5326 915 196 18 0 chr2 211690624 211690787 -41565796 - FRAM SINE Alu 0 166 1 1553 156 29 31 chr2 211690787 211690850 -41565733 - L1MC/D LINE L1 -858 5326 5264 1911 137 9 36 chr2 211691639 211691740 -41564843 - 7SLRNA srpRNA srpRNA 0 320 218 2236 94 3 10 chr2 211691740 211692038 -41564545 - AluSc SINE Alu -13 296 1 1911 137 9 36 chr2 211692038 211692265 -41564318 - 7SLRNA srpRNA srpRNA -102 218 1 2447 81 0 0 chr2 211692387 211692697 -41563886 - AluY SINE Alu 0 311 2 2387 91 0 22 chr2 211692698 211693017 -41563566 - AluSx SINE Alu 0 312 1 2204 97 7 0 chr2 211693453 211693742 -41562841 + AluSp SINE Alu 1 291 -22 2074 95 7 7 chr2 211693745 211694029 -41562554 + AluSg1 SINE Alu 1 284 -25 2143 115 0 0 chr2 211694418 211694724 -41561859 + AluSg SINE Alu 1 306 0 335 291 0 0 chr2 211695138 211695217 -41561366 - L2 LINE L2 -1 3312 3234 324 236 118 56 chr2 211695774 211695935 -41560648 + MIR SINE MIR 9 179 -29 237 239 0 30 chr2 211696090 211696157 -41560426 + MIR SINE MIR 90 154 -108 2569 60 0 0 chr2 211696378 211696677 -41559906 + AluY SINE Alu 1 299 -12 251 176 188 24 chr2 211696849 211696934 -41559649 + MIR SINE MIR 49 147 -115 2159 91 7 7 chr2 211697141 211697427 -41559156 - AluSq SINE Alu -23 290 5 337 242 61 0 chr2 211697696 211697795 -41558788 - L3 LINE CR1 -74 1503 1399 908 104 0 0 chr2 211698329 211698444 -41558139 + AluSq/x SINE Alu 1 115 -197 281 304 65 36 chr2 211698556 211698694 -41557889 + L2 LINE L2 3121 3262 -10 2331 76 7 0 chr2 211698697 211698986 -41557597 + AluY SINE Alu 1 291 -20 847 255 64 0 chr2 211699224 211699459 -41557124 + MIR SINE MIR 5 254 -8 2425 61 0 0 chr2 211700096 211700376 -41556207 - AluY SINE Alu -20 291 12 470 210 98 70 chr2 211700376 211700579 -41556004 + L2 LINE L2 3099 3310 -3 981 134 0 7 chr2 211700771 211700913 -41555670 - FAM SINE Alu -14 171 31 367 193 80 0 chr2 211701083 211701171 -41555412 + MLT1K LTR MaLR 338 432 -156 267 237 0 0 chr2 211701562 211701621 -41554962 - L2 LINE L2 -8 3264 3206 593 191 44 15 chr2 211702558 211702694 -41553889 - MIR SINE MIR -66 196 57 278 371 45 0 chr2 211702985 211703163 -41553420 + L2 LINE L2 2659 2844 -470 * 582 303 58 48 chr2 211703159 211703538 -41553045 - L2 LINE L2 0 3313 2931 355 331 15 8 chr2 211703721 211703851 -41552732 + L2 LINE L2 3142 3272 0 1889 167 3 13 chr2 211704924 211705229 -41551354 + AluJo SINE Alu 1 302 -10 264 274 48 10 chr2 211705282 211705468 -41551115 - L2 LINE L2 0 3313 3032 38 22 0 0 chr2 211705546 211705591 -41550992 + AT_rich Low_complexity Low_complexity 1 45 0 2121 115 4 0 chr2 211705591 211705870 -41550713 - AluSx SINE Alu -32 280 1 1990 150 3 10 chr2 211706237 211706551 -41550032 + AluSx SINE Alu 1 312 0 242 292 102 28 chr2 211708654 211708814 -41547769 + MIR SINE MIR 2 167 -41 506 296 97 0 chr2 211709975 211710161 -41546422 - MIR SINE MIR 0 262 59 1877 160 27 10 chr2 211710161 211710330 -41546253 - AluJb SINE Alu -7 305 127 2284 109 0 0 chr2 211710330 211710632 -41545951 - AluY SINE Alu -9 302 1 1877 160 27 10 chr2 211710632 211710762 -41545821 - AluJb SINE Alu -185 127 1 297 209 15 0 chr2 211710865 211710932 -41545651 + MIR SINE MIR 124 191 -71 2452 82 3 0 chr2 211710999 211711304 -41545279 + AluSx SINE Alu 1 306 -6 411 152 65 11 chr2 211711326 211711418 -41545165 + L1MC5 LINE L1 7834 7930 -31 731 131 0 0 chr2 211712165 211712272 -41544311 - AluJb SINE Alu -204 108 2 229 227 15 45 chr2 211712281 211712347 -41544236 - L2 LINE L2 -18 3295 3232 2190 132 0 3 chr2 211713597 211713907 -41542676 + AluSx SINE Alu 1 309 -3 1036 172 91 0 chr2 211713913 211714099 -41542484 + MER20 DNA MER1_type 1 203 -16 2079 134 0 7 chr2 211714188 211714494 -41542089 + LTR8 LTR ERV1 1 304 -387 628 299 59 67 chr2 211714494 211714979 -41541604 - L1ME LINE L1 -354 5767 5285 2294 85 0 0 chr2 211716742 211717035 -41539548 - AluSg SINE Alu -17 293 1 1884 126 30 13 chr2 211717727 211718028 -41538555 - AluSx SINE Alu -6 306 1 490 252 114 38 chr2 211718311 211718474 -41538109 - MIR3 SINE MIR -31 177 4 246 388 9 17 chr2 211719192 211719308 -41537275 - MIR SINE MIR -123 139 25 2307 90 0 0 chr2 211719366 211719667 -41536916 + AluSx SINE Alu 1 301 -11 883 109 8 0 chr2 211719973 211720101 -41536482 + AluSg/x SINE Alu 144 272 -40 445 196 110 59 chr2 211720101 211720320 -41536263 + pTR5 LTR ERV1 749 978 -1460 1766 172 184 32 chr2 211720431 211720897 -41535686 + LTR12 LTR ERV1 1 537 -177 238 194 113 16 chr2 211720897 211720959 -41535624 + Alu SINE Alu 221 288 -12 269 306 15 52 chr2 211720990 211721124 -41535459 - MIR3 SINE MIR -77 131 3 2402 82 0 0 chr2 211722114 211722419 -41534164 + AluSq SINE Alu 1 305 -8 198 0 0 0 chr2 211723835 211723857 -41532726 + (TA)n Simple_repeat Simple_repeat 2 23 0 2053 85 7 30 chr2 211723857 211724152 -41532431 - AluY SINE Alu -23 288 1 802 94 0 16 chr2 211724163 211724291 -41532292 + (TA)n Simple_repeat Simple_repeat 2 127 0 1794 132 7 21 chr2 211724291 211724580 -41532003 - AluSx SINE Alu -27 285 1 452 314 172 40 chr2 211724623 211724783 -41531800 + L2 LINE L2 2629 2767 -505 2131 93 3 3 chr2 211724783 211725072 -41531511 - AluSp SINE Alu -24 289 1 452 314 172 40 chr2 211725072 211725489 -41531094 + L2 LINE L2 2767 3272 0 2143 102 0 7 chr2 211725525 211725830 -41530753 + AluSq SINE Alu 1 303 -10 1971 120 3 0 chr2 211726010 211726332 -41530251 - AluSx SINE Alu 0 323 1 764 164 7 21 chr2 211727133 211727273 -41529310 - FLAM_C SINE Alu 0 143 6 2179 107 0 0 chr2 211727447 211727745 -41528838 + AluSx SINE Alu 1 298 -14 885 144 0 98 chr2 211727824 211728018 -41528565 - AluSp SINE Alu -2 311 137 1773 155 0 19 chr2 211728395 211728705 -41527878 + AluJb SINE Alu 1 304 -8 1388 101 29 5 chr2 211728960 211729169 -41527414 + L1MB2 LINE L1 5957 6170 -1 269 296 0 15 chr2 211729177 211729262 -41527321 - L2 LINE L2 -292 2980 2901 790 263 38 5 chr2 211730096 211730282 -41526301 + MIR SINE MIR 40 231 -31 387 60 0 0 chr2 211730308 211730358 -41526225 + (CCA)n Simple_repeat Simple_repeat 1 50 0 2311 93 6 0 chr2 211730714 211731025 -41525558 + AluSq SINE Alu 1 313 0 229 290 210 0 chr2 211731309 211731409 -41525174 + MER91C DNA MER1_type 20 140 0 1806 130 10 13 chr2 211731877 211732177 -41524406 - AluSx SINE Alu -13 299 1 1990 119 3 13 chr2 211732754 211733057 -41523526 - AluSx SINE Alu -11 301 2 200 143 24 0 chr2 211733099 211733141 -41523442 + GA-rich Low_complexity Low_complexity 1 43 0 193 255 21 0 chr2 211733182 211733229 -41523354 - MIR3 SINE MIR -8 200 153 25 0 0 0 chr2 211733253 211733278 -41523305 + AT_rich Low_complexity Low_complexity 1 25 0 2202 92 0 10 chr2 211734161 211734466 -41522117 + AluSq SINE Alu 1 302 -11 285 285 74 118 chr2 211734825 211735215 -41521368 + L2 LINE L2 2809 3181 -91 320 304 146 23 chr2 211735247 211735418 -41521165 + MIR SINE MIR 34 225 -37 1201 250 83 44 chr2 211735678 211736062 -41520521 - MLT1J LTR MaLR -61 450 52 477 263 35 9 chr2 211736457 211736571 -41520012 + MIR SINE MIR 32 148 -60 1783 154 3 23 chr2 211736571 211736781 -41519802 - AluJb SINE Alu -13 299 95 2532 111 5 16 chr2 211736781 211737149 -41519434 - THE1B LTR MaLR 0 364 1 1783 154 3 23 chr2 211737149 211737243 -41519340 - AluJb SINE Alu -217 95 1 1826 106 91 0 chr2 211737674 211737949 -41518634 - AluSx SINE Alu -12 300 1 344 240 66 33 chr2 211738460 211738581 -41518002 - LTR67 LTR ERVL -337 220 96 616 243 72 0 chr2 211739070 211739222 -41517361 - MER103 DNA DNA -2 164 2 387 329 8 11 chr2 211739284 211739416 -41517167 - MIR3 SINE MIR -48 160 42 2647 194 53 18 chr2 211739743 211740289 -41516294 - MLT1F1 LTR MaLR -2 565 1 1716 148 7 14 chr2 211740358 211740655 -41515928 + AluJo SINE Alu 1 295 -17 23 0 0 0 chr2 211741198 211741221 -41515362 + AT_rich Low_complexity Low_complexity 1 23 0 611 39 13 0 chr2 211741712 211741790 -41514793 - MADE1 DNA Mariner -1 79 1 201 39 0 0 chr2 211741830 211741856 -41514727 + (CAAAC)n Simple_repeat Simple_repeat 5 30 0 207 0 0 0 chr2 211742047 211742070 -41514513 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 278 212 0 61 chr2 211742233 211742299 -41514284 - L2 LINE L2 -9 3263 3202 390 338 52 15 chr2 211742716 211742852 -41513731 - MIR3 SINE MIR -56 152 12 256 320 164 0 chr2 211743927 211744055 -41512528 - MER91A DNA MER1_type -27 169 21 2742 174 149 66 chr2 211744217 211744975 -41511608 - MER21B LTR ERV1 -38 825 5 401 291 0 26 chr2 211745068 211745219 -41511364 + (CA)n Simple_repeat Simple_repeat 2 148 0 260 298 11 11 chr2 211745280 211745374 -41511209 + (CA)n Simple_repeat Simple_repeat 2 95 0 2101 109 0 47 chr2 211745426 211745748 -41510835 - AluSg SINE Alu -3 307 1 2387 230 46 25 chr2 211748118 211748765 -41507818 + L1MC4 LINE L1 7263 7923 -119 2011 107 4 0 chr2 211748924 211749234 -41507349 - AluSx SINE Alu 0 311 1 699 306 105 0 chr2 211749772 211750001 -41506582 + MIR SINE MIR 3 255 -7 2088 97 10 13 chr2 211750257 211750557 -41506026 - AluSx SINE Alu -13 299 1 892 302 131 12 chr2 211751259 211751670 -41504913 + MLT1K LTR MaLR 67 526 -62 662 109 13 39 chr2 211751670 211751826 -41504757 + (TTCC)n Simple_repeat Simple_repeat 3 154 0 2530 174 66 25 chr2 211752125 211752642 -41503941 + MER74A LTR ERVL 21 558 0 28 0 0 0 chr2 211752653 211752681 -41503902 + AT_rich Low_complexity Low_complexity 1 28 0 748 143 64 7 chr2 211752706 211752846 -41503737 - L1ME2 LINE L1 -13 6151 6004 181 267 0 0 chr2 211753219 211753264 -41503319 - L3 LINE CR1 -2 1575 1531 21 0 0 0 chr2 211753645 211753666 -41502917 + AT_rich Low_complexity Low_complexity 1 21 0 338 192 27 0 chr2 211754332 211754405 -41502178 + L1MC4a LINE L1 5827 5901 -1907 534 222 46 0 chr2 211754473 211754581 -41502002 + MIR SINE MIR 117 229 -33 285 98 0 0 chr2 211754755 211754796 -41501787 + (TG)n Simple_repeat Simple_repeat 1 41 0 258 294 50 8 chr2 211755801 211755920 -41500663 - MIR SINE MIR -75 187 64 586 242 96 6 chr2 211756839 211756996 -41499587 - MIR SINE MIR -83 179 9 1877 131 0 7 chr2 211757671 211757953 -41498630 + AluJo SINE Alu 1 280 -32 279 0 0 0 chr2 211758138 211758169 -41498414 + (CA)n Simple_repeat Simple_repeat 1 31 0 391 269 34 27 chr2 211758185 211758334 -41498249 - MIR SINE MIR -50 212 63 468 287 38 6 chr2 211758422 211758579 -41498004 + MER103 DNA DNA 4 165 -1 2211 98 3 0 chr2 211758584 211758881 -41497702 - AluSq SINE Alu -15 298 1 1859 157 3 3 chr2 211759069 211759375 -41497208 + AluSx SINE Alu 1 306 -6 272 243 28 65 chr2 211759749 211759856 -41496727 + MIR SINE MIR 103 205 -57 2095 107 0 0 chr2 211760875 211761155 -41495428 - AluSx SINE Alu -32 280 1 289 276 71 36 chr2 211761477 211761631 -41494952 - MIR SINE MIR -65 143 36 522 220 113 27 chr2 211761830 211761980 -41494603 - MIR SINE MIR -4 258 96 1848 155 3 19 chr2 211762138 211762455 -41494128 + AluJb SINE Alu 1 312 0 189 107 0 0 chr2 211762458 211762486 -41494097 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 1865 139 3 3 chr2 211762669 211762956 -41493627 - AluJo SINE Alu -25 287 1 404 279 32 57 chr2 211763168 211763326 -41493257 - MIR SINE MIR -81 181 28 187 255 20 0 chr2 211763358 211763409 -41493174 - MIR3 SINE MIR -1 207 156 2056 92 13 7 chr2 211763565 211763869 -41492714 - AluSq SINE Alu -7 306 1 2414 164 59 35 chr2 211765111 211765154 -41491429 - L1MB4 LINE L1 -3 6177 6137 1906 118 47 14 chr2 211765154 211765450 -41491133 + AluSg SINE Alu 1 306 -4 2414 164 59 35 chr2 211765450 211765790 -41490793 - L1MB4 LINE L1 -43 6137 5775 1257 173 207 10 chr2 211765790 211766090 -41490493 - MER46B DNA MER2_type -2 234 1 2414 164 59 35 chr2 211766090 211766247 -41490336 - L1MB4 LINE L1 -405 5775 5623 1914 149 0 3 chr2 211766255 211766557 -41490026 - AluSx SINE Alu -11 301 1 1905 122 14 3 chr2 211766563 211766850 -41489733 - AluSq SINE Alu -15 298 9 2323 100 10 0 chr2 211766890 211767190 -41489393 - AluSp SINE Alu -9 304 2 1587 125 5 13 chr2 211767340 211767564 -41489019 - AluSx SINE Alu -90 222 1 2332 86 13 7 chr2 211768028 211768329 -41488254 + AluSx SINE Alu 1 303 -9 914 219 18 36 chr2 211768456 211768675 -41487908 - MER20 DNA MER1_type -4 215 1 2172 83 3 17 chr2 211768869 211769157 -41487426 - AluY SINE Alu -10 301 18 681 296 33 9 chr2 211769390 211769603 -41486980 + LTR16A LTR ERVL 231 448 -2 391 215 97 0 chr2 211769628 211769721 -41486862 + MLT1I LTR MaLR 308 409 0 3655 133 55 73 chr2 211770020 211770280 -41486303 - MER44D DNA MER2_type -1882 605 342 1815 115 82 11 chr2 211770280 211770559 -41486024 - AluSx SINE Alu -13 299 1 3655 133 55 73 chr2 211770559 211770647 -41485936 - MER44D DNA MER2_type -2145 342 254 2352 57 0 17 chr2 211770647 211770943 -41485640 - AluY SINE Alu 0 311 21 3655 133 55 73 chr2 211770943 211771243 -41485340 - MER44D DNA MER2_type -2233 254 96 2213 116 6 0 chr2 211771243 211771554 -41485029 + AluSp SINE Alu 1 313 0 3655 133 55 73 chr2 211771554 211771647 -41484936 - MER44D DNA MER2_type -2391 96 3 2227 82 4 0 chr2 211771909 211772231 -41484352 + AluSx SINE Alu 1 323 0 22 0 0 0 chr2 211773599 211773621 -41482962 + GC_rich Low_complexity Low_complexity 1 22 0 32 0 0 0 chr2 211773650 211773682 -41482901 + GC_rich Low_complexity Low_complexity 1 32 0 213 260 0 0 chr2 211773713 211773763 -41482820 + G-rich Low_complexity Low_complexity 4 53 0 369 62 0 0 chr2 211773989 211774037 -41482546 + (CGG)n Simple_repeat Simple_repeat 2 49 0 21 0 0 0 chr2 211774479 211774500 -41482083 + GC_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 211775393 211775416 -41481167 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 211776207 211776230 -41480353 + AT_rich Low_complexity Low_complexity 1 23 0 623 306 46 0 chr2 211776673 211776869 -41479714 - MIR SINE MIR -1 261 57 285 29 0 0 chr2 211777316 211777350 -41479233 + (TTTC)n Simple_repeat Simple_repeat 3 36 0 1888 118 3 38 chr2 211777354 211777643 -41478940 - AluSg SINE Alu -31 279 1 316 219 105 26 chr2 211777922 211778036 -41478547 + MER5A DNA MER1_type 7 129 -60 2183 90 35 0 chr2 211778098 211778387 -41478196 - AluSp SINE Alu -5 308 10 217 0 0 57 chr2 211778388 211778423 -41478160 + (GCCTG)n Simple_repeat Simple_repeat 3 35 0 2433 97 0 0 chr2 211778437 211778745 -41477838 - AluSg SINE Alu 0 310 3 238 222 37 49 chr2 211778765 211778846 -41477737 - MLT1G1 LTR MaLR 0 595 516 2301 121 0 0 chr2 211779522 211779829 -41476754 - AluSg SINE Alu 0 310 4 1069 104 0 0 chr2 211779830 211779965 -41476618 - AluSq/x SINE Alu -178 135 1 313 252 71 39 chr2 211780320 211780447 -41476136 + MER5A DNA MER1_type 59 189 0 595 134 188 0 chr2 211780626 211780738 -41475845 + AluSq/x SINE Alu 3 135 -178 2243 98 3 10 chr2 211780739 211780873 -41475710 + AluSx SINE Alu 1 134 -178 2236 102 30 0 chr2 211780873 211781176 -41475407 + AluSq SINE Alu 1 312 -1 2243 98 3 10 chr2 211781176 211781338 -41475245 + AluSx SINE Alu 134 295 -17 2342 101 3 0 chr2 211781364 211781670 -41474913 + AluSq SINE Alu 1 307 -6 710 0 39 20 chr2 211781985 211782087 -41474496 + (TTTC)n Simple_repeat Simple_repeat 1 104 0 2167 104 4 0 chr2 211782087 211782367 -41474216 - AluSp SINE Alu -32 281 1 2450 83 0 0 chr2 211782836 211783137 -41473446 - AluSg SINE Alu -8 302 2 303 309 73 0 chr2 211783254 211783390 -41473193 - L1MC/D LINE L1 -1985 5823 5678 2610 258 65 25 chr2 211783410 211784149 -41472434 + L2 LINE L2 1932 2713 -601 2379 82 0 20 chr2 211784149 211784455 -41472128 - AluSg SINE Alu -8 302 3 2610 258 65 25 chr2 211784455 211784591 -41471992 + L2 LINE L2 2713 2842 -472 249 196 72 82 chr2 211784792 211784889 -41471694 - MIR SINE MIR -48 214 119 2380 104 0 0 chr2 211785596 211785895 -41470688 + AluSx SINE Alu 8 306 -6 2218 97 0 13 chr2 211785978 211786277 -41470306 + AluY SINE Alu 2 296 -15 1533 159 55 28 chr2 211786429 211786719 -41469864 + AluJo SINE Alu 1 298 -14 2385 93 0 0 chr2 211786719 211787019 -41469564 + AluY SINE Alu 1 300 -11 2257 78 20 0 chr2 211787118 211787412 -41469171 - AluSp SINE Alu -13 300 1 363 308 102 54 chr2 211787651 211787794 -41468789 - L1MC/D LINE L1 -2143 5665 5530 2302 109 3 3 chr2 211787794 211788105 -41468478 - AluSx SINE Alu -1 311 1 363 308 102 54 chr2 211788105 211788296 -41468287 - L1MC/D LINE L1 -2278 5530 5315 2267 72 59 0 chr2 211788454 211788744 -41467839 - AluSp SINE Alu -1 312 6 207 0 0 0 chr2 211788765 211788788 -41467795 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1580 181 52 7 chr2 211788794 211789065 -41467518 - AluJb SINE Alu -29 283 1 837 174 60 0 chr2 211789076 211789225 -41467358 - AluJb SINE Alu -20 292 135 2437 87 0 0 chr2 211789235 211789533 -41467050 - AluSc SINE Alu -11 298 1 2138 103 3 20 chr2 211789547 211789849 -41466734 - AluSx SINE Alu -15 297 1 2401 87 0 13 chr2 211790443 211790753 -41465830 + AluY SINE Alu 1 306 -5 1626 185 109 80 chr2 211790880 211791506 -41465077 + LTR48B LTR ERV1 1 644 0 2921 134 10 85 chr2 211791765 211791973 -41464610 - MER41A LTR ERV1 0 554 332 2042 125 3 0 chr2 211791973 211792261 -41464322 - AluSx SINE Alu -23 289 1 2921 134 10 85 chr2 211792261 211792600 -41463983 - MER41A LTR ERV1 -222 332 53 2324 87 0 10 chr2 211792600 211792900 -41463683 - AluSg SINE Alu -13 297 1 2921 134 10 85 chr2 211792900 211792950 -41463633 - MER41A LTR ERV1 -501 53 1 1733 154 18 0 chr2 211793176 211793456 -41463127 - AluJb SINE Alu -27 285 1 2409 99 3 0 chr2 211794031 211794343 -41462240 - AluSp SINE Alu 0 313 1 896 74 0 0 chr2 211794638 211794746 -41461837 - AluSp/q SINE Alu -21 292 185 562 274 89 26 chr2 211794770 211795073 -41461510 - L1ME4a LINE L1 -165 5956 5635 1937 139 45 0 chr2 211795109 211795396 -41461187 - AluJo SINE Alu -12 300 1 1683 160 10 7 chr2 211795797 211796085 -41460498 + AluJb SINE Alu 1 289 -23 2300 116 0 0 chr2 211796092 211796393 -41460190 + AluSg1 SINE Alu 1 301 -8 2045 96 39 3 chr2 211796411 211796693 -41459890 + AluSc SINE Alu 1 292 -17 261 0 0 0 chr2 211796693 211796722 -41459861 + (TA)n Simple_repeat Simple_repeat 2 30 0 356 278 0 0 chr2 211796722 211796812 -41459771 - L1MC4 LINE L1 -1339 6703 6614 1249 84 0 64 chr2 211796816 211797018 -41459565 + AluSq SINE Alu 125 313 0 564 253 41 14 chr2 211797020 211797166 -41459417 + MLT1E LTR MaLR 356 505 -88 2175 92 16 3 chr2 211797200 211797506 -41459077 - AluY SINE Alu -1 310 1 1308 99 14 57 chr2 211797514 211797725 -41458858 - AluSg/x SINE Alu -26 286 85 306 87 0 0 chr2 211797725 211797771 -41458812 - Alu SINE Alu -52 248 203 977 74 8 0 chr2 211797771 211797892 -41458691 - AluSc SINE Alu -181 128 7 2336 91 0 10 chr2 211797892 211798201 -41458382 - AluSp SINE Alu -7 306 1 2438 63 3 0 chr2 211798304 211798605 -41457978 - AluY SINE Alu -9 302 1 1603 133 84 8 chr2 211798658 211799087 -41457496 - AluSx SINE Alu 0 449 1 2123 105 24 3 chr2 211799282 211799405 -41457178 + AluSc SINE Alu 2 121 -188 198 0 0 0 chr2 211799405 211799427 -41457156 + (CAAAA)n Simple_repeat Simple_repeat 5 26 0 2123 105 24 3 chr2 211799427 211799597 -41456986 + AluSc SINE Alu 121 301 -8 615 238 35 52 chr2 211800490 211800568 -41456015 + MLT1I LTR MaLR 1 79 -330 2055 94 49 3 chr2 211800568 211800855 -41455728 - AluSg SINE Alu -10 300 1 615 238 35 52 chr2 211800855 211800948 -41455635 + MLT1I LTR MaLR 79 169 -240 490 265 9 91 chr2 211801088 211801245 -41455338 + LTR16A LTR ERVL 7 143 -307 2487 54 0 3 chr2 211801245 211801543 -41455040 - AluY SINE Alu -14 297 1 490 265 9 91 chr2 211801543 211801604 -41454979 + LTR16A LTR ERVL 143 207 -243 1014 73 8 0 chr2 211801618 211801742 -41454841 + AluSq/x SINE Alu 2 126 -187 593 191 99 7 chr2 211801842 211801983 -41454600 + AluSg/x SINE Alu 146 299 -13 2328 88 10 0 chr2 211802704 211802999 -41453584 + AluSp SINE Alu 1 298 -15 779 326 48 18 chr2 211803102 211803575 -41453008 - L2 LINE L2 -246 3067 2584 1685 179 3 10 chr2 211803688 211803984 -41452599 + AluJo SINE Alu 2 295 -17 1637 164 3 38 chr2 211804015 211804302 -41452281 - AluJo SINE Alu -30 282 6 2404 93 3 3 chr2 211806094 211806404 -41450179 + AluSg SINE Alu 1 310 0 243 0 0 0 chr2 211806506 211806533 -41450050 + (TG)n Simple_repeat Simple_repeat 2 28 0 1124 122 16 58 chr2 211806534 211806688 -41449895 - AluSg/x SINE Alu -22 290 144 2363 84 3 0 chr2 211806688 211806985 -41449598 - AluSp SINE Alu -15 298 1 1124 122 16 58 chr2 211806985 211807018 -41449565 - AluSg/x SINE Alu -168 144 111 339 85 0 0 chr2 211807021 211807068 -41449515 + (TCCCC)n Simple_repeat Simple_repeat 3 49 0 2047 103 0 4 chr2 211807070 211807342 -41449241 - AluSc SINE Alu -25 284 14 2079 115 14 3 chr2 211807583 211807878 -41448705 + AluSp SINE Alu 2 299 -14 2374 93 0 13 chr2 211808051 211808352 -41448231 - AluSx SINE Alu -15 297 1 925 166 36 10 chr2 211808501 211808688 -41447895 - L1PA16 LINE L1 -19 6146 5955 1626 174 36 0 chr2 211808698 211808979 -41447604 - AluJb SINE Alu -21 291 1 3247 187 58 27 chr2 211809188 211809263 -41447320 - MER45B DNA AcHobo -542 1039 968 2435 88 0 0 chr2 211809263 211809568 -41447015 + AluY SINE Alu 1 305 -6 3247 187 58 27 chr2 211809568 211810203 -41446380 - MER45B DNA AcHobo -613 968 307 1967 117 41 54 chr2 211810783 211811099 -41445484 - AluSx SINE Alu 0 312 1 848 164 0 29 chr2 211811099 211811239 -41445344 - AluSq/x SINE Alu -177 136 1 1764 163 3 14 chr2 211811347 211811636 -41444947 + AluSx SINE Alu 1 286 -26 1827 164 7 10 chr2 211811786 211812091 -41444492 + AluJb SINE Alu 1 304 -8 324 209 58 23 chr2 211812261 211812347 -41444236 + MER104 DNA Tc2 35 123 -57 21 0 0 0 chr2 211812406 211812427 -41444156 + AT_rich Low_complexity Low_complexity 1 21 0 2317 73 3 23 chr2 211812489 211812789 -41443794 + AluSp SINE Alu 1 294 -19 2341 105 0 3 chr2 211813617 211813931 -41442652 - AluSq SINE Alu 0 313 1 2337 87 10 0 chr2 211814404 211814702 -41441881 + AluSg SINE Alu 2 302 -8 294 324 83 33 chr2 211814713 211814934 -41441649 + MIR SINE MIR 34 262 0 246 310 117 7 chr2 211814945 211815090 -41441493 + MIR SINE MIR 91 251 -11 2269 95 3 7 chr2 211815201 211815518 -41441065 - AluSq SINE Alu 0 316 1 507 17 0 0 chr2 211815651 211815711 -41440872 + (TC)n Simple_repeat Simple_repeat 1 60 0 640 208 8 0 chr2 211815990 211816115 -41440468 + FLAM_C SINE Alu 1 126 -7 2354 57 11 0 chr2 211816575 211816858 -41439725 - AluSp SINE Alu -11 302 17 752 158 15 30 chr2 211817048 211817181 -41439402 - FLAM_C SINE Alu -2 131 1 261 245 19 0 chr2 211817181 211817234 -41439349 + Tigger5 DNA MER2_type 2270 2323 0 206 32 32 0 chr2 211817244 211817275 -41439308 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 2374 54 3 13 chr2 211817279 211817577 -41439006 - AluYb8 SINE Alu -21 297 3 198 281 0 31 chr2 211818019 211818083 -41438500 + L2 LINE L2 3210 3271 -1 1846 161 3 7 chr2 211818511 211818796 -41437787 + AluSx SINE Alu 3 286 -26 785 157 0 50 chr2 211818880 211819020 -41437563 + FLAM_C SINE Alu 1 133 0 4149 190 85 55 chr2 211819067 211819427 -41437156 + L1MC4a LINE L1 6175 6523 -1285 2056 145 7 0 chr2 211819427 211819731 -41436852 - AluSx SINE Alu -6 306 1 4149 190 85 55 chr2 211819731 211820043 -41436540 + L1MC4a LINE L1 6523 6824 -984 2213 96 0 0 chr2 211820043 211820325 -41436258 - AluY SINE Alu -29 282 1 4149 190 85 55 chr2 211820325 211820355 -41436228 + L1MC4a LINE L1 6824 6852 -956 301 132 19 0 chr2 211820355 211820408 -41436175 - L1MC1 LINE L1 -6 6327 6274 4149 190 85 55 chr2 211820408 211820691 -41435892 + L1MC4a LINE L1 6852 7125 -683 1600 190 147 11 chr2 211820691 211821128 -41435455 - LTR54B LTR ERV1 -2 496 1 4149 190 85 55 chr2 211821128 211821597 -41434986 + L1MC4a LINE L1 7125 7808 0 2459 56 0 3 chr2 211821777 211822065 -41434518 - AluY SINE Alu -24 287 1 23 0 0 0 chr2 211822078 211822101 -41434482 + AT_rich Low_complexity Low_complexity 1 23 0 3084 208 13 28 chr2 211822393 211823027 -41433556 - MER82 DNA MER2_type -2 651 28 1876 158 10 7 chr2 211823118 211823410 -41433173 - AluJb SINE Alu -19 293 1 5023 135 36 17 chr2 211823451 211824191 -41432392 + Tigger1 DNA MER2_type 1 759 -1659 2005 125 28 3 chr2 211824191 211824479 -41432104 - AluSx SINE Alu -17 295 1 5023 135 36 17 chr2 211824479 211824551 -41432032 + Tigger1 DNA MER2_type 759 828 -1590 5810 97 11 26 chr2 211824556 211824639 -41431944 + Tigger1 DNA MER2_type 965 1048 -1370 2281 102 3 3 chr2 211824639 211824944 -41431639 + AluSp SINE Alu 5 309 -4 5810 97 11 26 chr2 211824944 211825714 -41430869 + Tigger1 DNA MER2_type 1048 1805 -613 935 180 37 0 chr2 211825714 211825875 -41430708 - AluJb SINE Alu -12 300 134 2388 82 0 0 chr2 211825875 211826167 -41430416 - AluSc SINE Alu -13 296 5 697 100 30 0 chr2 211826172 211826272 -41430311 + Tigger1 DNA MER2_type 1797 1899 -519 2401 103 0 0 chr2 211826272 211826583 -41430000 - AluY SINE Alu 0 311 1 1217 112 0 0 chr2 211826590 211826751 -41429832 - AluSg/x SINE Alu -18 292 132 2036 91 14 17 chr2 211826751 211827047 -41429536 - AluSp SINE Alu -18 295 1 1039 198 128 52 chr2 211827428 211827754 -41428829 + MLT1A2 LTR MaLR 1 356 -18 2053 124 61 25 chr2 211827754 211828116 -41428467 + THE1C LTR MaLR 1 375 0 1039 198 128 52 chr2 211828116 211828133 -41428450 + MLT1A2 LTR MaLR 356 370 -4 651 337 82 18 chr2 211828199 211828666 -41427917 - L2 LINE L2 -247 3025 2531 723 114 44 0 chr2 211828712 211828826 -41427757 + MER41B LTR ERV1 517 635 0 1567 189 3 29 chr2 211829018 211829330 -41427253 + AluJo SINE Alu 1 304 -8 251 276 0 45 chr2 211829330 211829478 -41427105 + GA-rich Low_complexity Low_complexity 8 150 0 1916 165 0 13 chr2 211829713 211830029 -41426554 - AluJb SINE Alu 0 312 1 282 294 65 60 chr2 211830307 211830344 -41426239 + L2 LINE L2 2490 2525 -789 1774 151 6 32 chr2 211830344 211830656 -41425927 - AluJb SINE Alu -8 304 1 282 294 65 60 chr2 211830656 211830819 -41425764 + L2 LINE L2 2525 2691 -623 1585 195 7 13 chr2 211830822 211831125 -41425458 - AluJo SINE Alu -11 301 1 2206 96 45 0 chr2 211831134 211831425 -41425158 - AluSx SINE Alu -8 304 1 477 207 104 37 chr2 211831425 211831560 -41425023 - MLT1I LTR MaLR -13 396 253 475 300 100 0 chr2 211831635 211831991 -41424592 - L1M LINE L1 -740 5422 5023 1837 187 9 0 chr2 211832141 211832462 -41424121 + MER57A LTR ERV1 1 324 -79 1083 120 0 22 chr2 211832512 211832763 -41423820 + AluSx SINE Alu 2 290 -20 745 280 46 35 chr2 211832863 211833234 -41423349 + L1ME4a LINE L1 5546 5920 -201 2383 42 24 0 chr2 211833234 211833521 -41423062 - AluY SINE Alu -17 294 1 2014 138 3 13 chr2 211833697 211833995 -41422588 - AluSx SINE Alu -17 295 1 855 70 18 0 chr2 211834658 211834772 -41421811 + AluY SINE Alu 185 300 -11 2203 88 3 3 chr2 211835035 211835319 -41421264 - AluSg SINE Alu -26 284 1 1189 249 18 120 chr2 211835418 211835751 -41420832 - AluSg SINE Alu -1 299 1 912 182 6 35 chr2 211836122 211836292 -41420291 - FRAM SINE Alu 0 166 2 23 0 0 0 chr2 211836920 211836943 -41419640 + AT_rich Low_complexity Low_complexity 1 23 0 1894 112 49 31 chr2 211836943 211837230 -41419353 - AluSx SINE Alu -20 292 1 216 0 0 0 chr2 211837230 211837254 -41419329 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 241 219 126 106 chr2 211837404 211837555 -41419028 + MLT1J LTR MaLR 5 158 -353 1949 116 58 0 chr2 211837674 211837968 -41418615 + AluSx SINE Alu 1 311 -1 355 39 19 0 chr2 211837968 211838020 -41418563 + L1MA3 LINE L1 6253 6305 0 1406 98 10 39 chr2 211838214 211838417 -41418166 - AluSq SINE Alu -116 197 1 1156 180 168 0 chr2 211838420 211838664 -41417919 - AluSg SINE Alu -15 285 1 541 196 10 0 chr2 211838665 211838767 -41417816 - L1PA16 LINE L1 -15 6151 6049 1893 147 28 0 chr2 211838989 211839275 -41417308 - AluJb SINE Alu -18 294 1 3117 140 69 31 chr2 211839457 211840037 -41416546 - Tigger3(Golem) DNA MER2_type 0 3029 2428 297 75 0 0 chr2 211840038 211840078 -41416505 + (TA)n Simple_repeat Simple_repeat 2 41 0 1963 100 68 0 chr2 211841045 211841324 -41415259 + AluSq SINE Alu 1 298 -15 1656 179 28 7 chr2 211841463 211841753 -41414830 + AluJo SINE Alu 1 296 -16 853 253 48 24 chr2 211841763 211842012 -41414571 + L1MC/D LINE L1 5555 5809 -1999 1060 136 10 45 chr2 211842113 211842312 -41414271 + AluSg/x SINE Alu 119 310 0 2306 48 3 48 chr2 211842345 211842654 -41413929 - AluY SINE Alu -16 295 1 1787 131 4 8 chr2 211842821 211843088 -41413495 + AluSx SINE Alu 26 291 -21 299 183 17 0 chr2 211843185 211843245 -41413338 + L1M4 LINE L1 3966 4026 -2120 2807 68 33 24 chr2 211843246 211843403 -41413180 + SVA Other Other 19 782 -1218 2807 70 44 16 chr2 211843403 211843831 -41412752 + SVA Other Other 343 782 -604 208 298 0 0 chr2 211844003 211844087 -41412496 + C-rich Low_complexity Low_complexity 1 84 0 2341 103 166 203 chr2 211844229 211845041 -41411542 + pTR5 LTR ERV1 12 2438 0 2300 89 10 3 chr2 211845084 211845386 -41411197 - AluSg SINE Alu -6 304 1 562 192 50 8 chr2 211845386 211845506 -41411077 + MLT1A1 LTR MaLR 4 128 -237 1100 110 7 19 chr2 211845606 211845760 -41410823 - AluSc SINE Alu -157 152 1 2033 124 21 3 chr2 211845802 211846093 -41410490 + AluSx SINE Alu 1 296 -16 2356 80 3 3 chr2 211846800 211847088 -41409495 + AluSp SINE Alu 1 288 -25 225 0 0 0 chr2 211847188 211847213 -41409370 + (TA)n Simple_repeat Simple_repeat 2 26 0 259 111 44 0 chr2 211847222 211847267 -41409316 - AluSc SINE Alu 0 299 253 1260 167 9 21 chr2 211847267 211847500 -41409083 + AluJb SINE Alu 72 301 -11 6728 104 62 13 chr2 211847500 211848191 -41408392 - HSMAR2 DNA Mariner -234 1068 310 2467 80 0 0 chr2 211848191 211848491 -41408092 - AluSc SINE Alu -9 300 1 6728 104 62 13 chr2 211848491 211848817 -41407766 - HSMAR2 DNA Mariner -992 310 1 400 69 0 17 chr2 211848819 211848835 -41407748 + MLT2B1 LTR ERVL 464 479 -41 267 103 0 0 chr2 211848835 211848874 -41407709 + (CCTA)n Simple_repeat Simple_repeat 4 42 0 400 69 0 17 chr2 211848874 211848915 -41407668 + MLT2B1 LTR ERVL 479 520 0 292 98 66 33 chr2 211849400 211849461 -41407122 - Alu SINE Alu -237 63 1 2012 128 4 4 chr2 211849521 211849832 -41406751 - AluSx SINE Alu 0 311 1 753 136 34 0 chr2 211849925 211850043 -41406540 - AluSq/x SINE Alu -190 122 1 1465 195 7 20 chr2 211850323 211850620 -41405963 + AluJo SINE Alu 1 293 -19 1741 147 9 60 chr2 211850628 211850947 -41405636 + AluSx SINE Alu 1 303 -9 2151 138 0 0 chr2 211850947 211851245 -41405338 + AluSx SINE Alu 1 298 -14 2400 81 0 0 chr2 211851271 211851568 -41405015 + AluSg SINE Alu 1 297 -13 2221 84 18 0 chr2 211852061 211852347 -41404236 - AluSg SINE Alu -19 291 1 24 53 0 0 chr2 211852422 211852460 -41404123 + AT_rich Low_complexity Low_complexity 1 38 0 2962 169 23 14 chr2 211852485 211853052 -41403531 - L1MB7 LINE L1 0 6184 5613 2342 78 3 0 chr2 211853075 211853384 -41403199 + AluSp SINE Alu 1 310 0 959 176 50 9 chr2 211853384 211853605 -41402978 - L1MB7 LINE L1 -867 5279 5050 2040 133 82 94 chr2 211853705 211854215 -41402368 - LTR1 LTR ERV1 -281 504 1 1792 182 33 0 chr2 211854724 211855026 -41401557 + AluJb SINE Alu 1 312 0 1969 184 42 24 chr2 211855245 211855790 -41400793 + pTR5 LTR ERV1 741 1295 -1143 * 6604 115 11 34 chr2 211855771 211856826 -41399757 + HERV9 LTR ERV1 27 1057 -7342 230 306 0 0 chr2 211857027 211857099 -41399484 + G-rich Low_complexity Low_complexity 1 72 0 2129 100 10 17 chr2 211857267 211857566 -41399017 - AluSp SINE Alu -16 297 1 1493 201 48 0 chr2 211857647 211857940 -41398643 + AluJo SINE Alu 1 307 -5 2208 97 7 7 chr2 211857959 211858257 -41398326 + AluSc SINE Alu 1 298 -11 837 174 60 0 chr2 211858267 211858416 -41398167 + AluJb SINE Alu 135 292 -20 1502 181 55 11 chr2 211858427 211858698 -41397885 + AluJb SINE Alu 1 283 -29 207 0 0 0 chr2 211858704 211858727 -41397856 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2267 72 59 0 chr2 211858748 211859038 -41397545 + AluSp SINE Alu 6 312 -1 346 314 96 51 chr2 211859196 211859387 -41397196 + L1MC/D LINE L1 5315 5527 -2281 2337 110 3 0 chr2 211859387 211859697 -41396886 + AluSx SINE Alu 1 311 -1 346 314 96 51 chr2 211859697 211859817 -41396766 + L1MC/D LINE L1 5527 5640 -2168 278 172 40 61 chr2 211859955 211860054 -41396529 + (TCTCTG)n Simple_repeat Simple_repeat 5 101 0 30051 72 3 7 chr2 211860079 211863907 -41392676 - HERV9 LTR ERV1 -3455 4944 1132 261 128 0 0 chr2 211864386 211864433 -41392150 + (A)n Simple_repeat Simple_repeat 1 47 0 2048 92 28 3 chr2 211866596 211866880 -41389703 - LTR1 LTR ERV1 0 785 495 412 83 0 17 chr2 211866980 211867040 -41389543 - Alu SINE Alu -258 60 2 2223 110 13 7 chr2 211867162 211867470 -41389113 + AluSx SINE Alu 1 310 -2 35 0 0 0 chr2 211867983 211868018 -41388565 + AT_rich Low_complexity Low_complexity 1 35 0 635 205 0 0 chr2 211868024 211868141 -41388442 - FLAM_C SINE Alu -25 118 2 2220 128 0 0 chr2 211868356 211868681 -41387902 + AluSg SINE Alu 3 327 0 4074 132 92 23 chr2 211868876 211869605 -41386978 + MER4E LTR ERV1 1 779 0 1943 79 20 4 chr2 211869899 211870151 -41386432 - AluY SINE Alu -54 257 2 786 126 0 24 chr2 211870529 211870656 -41385927 - FLAM_C SINE Alu -5 138 15 541 116 0 89 chr2 211870665 211870777 -41385806 + MER3 DNA MER1_type 74 128 -81 1460 216 50 20 chr2 211870794 211871137 -41385446 + MLT1A2 LTR MaLR 18 370 -4 1954 145 7 10 chr2 211871564 211871867 -41384716 + AluJb SINE Alu 1 302 -10 4517 84 29 21 chr2 211871967 211872632 -41383951 - L1MA3 LINE L1 0 6305 5636 24 53 0 0 chr2 211872636 211872674 -41383909 + AT_rich Low_complexity Low_complexity 1 38 0 313 346 0 3 chr2 211872769 211872976 -41383607 + L2 LINE L2 2715 2967 -305 284 336 115 8 chr2 211873131 211873253 -41383330 + L2 LINE L2 3179 3313 0 721 183 8 0 chr2 211873312 211873432 -41383151 - FLAM_A SINE Alu -12 121 1 1152 233 137 6 chr2 211873475 211873881 -41382702 + L1ME1 LINE L1 5652 6110 -56 2112 126 0 16 chr2 211873881 211874198 -41382385 + AluSp SINE Alu 1 312 -1 2490 82 3 0 chr2 211874424 211874727 -41381856 - AluSp SINE Alu -9 304 1 2429 174 32 56 chr2 211874951 211874997 -41381586 - MER68 LTR ERV1 -50 512 466 1936 142 0 37 chr2 211874997 211875321 -41381262 - AluSx SINE Alu 0 312 1 2429 174 32 56 chr2 211875321 211875775 -41380808 - MER68 LTR ERV1 -96 466 24 2064 95 37 0 chr2 211875775 211876101 -41380482 - AluSp SINE Alu 0 336 1 208 297 48 67 chr2 211876126 211876291 -41380292 - L2 LINE L2 -14 3299 3138 22 0 0 0 chr2 211876483 211876505 -41380078 + AT_rich Low_complexity Low_complexity 1 22 0 1412 170 63 19 chr2 211876588 211876859 -41379724 - AluJo SINE Alu -29 283 1 334 161 0 27 chr2 211877166 211877183 -41379400 + Alu SINE Alu 1 17 -283 1811 154 37 7 chr2 211877183 211877481 -41379102 + AluJb SINE Alu 1 307 -5 2444 75 0 0 chr2 211877482 211877775 -41378808 + AluSc SINE Alu 2 294 -15 334 161 0 27 chr2 211877775 211877828 -41378755 + Alu SINE Alu 16 48 -252 1107 110 0 0 chr2 211877829 211878002 -41378581 + AluSg/x SINE Alu 138 310 0 545 159 93 19 chr2 211878002 211878109 -41378474 + AluJb SINE Alu 134 248 -64 1335 104 0 16 chr2 211878109 211878291 -41378292 - AluY SINE Alu -132 179 1 213 304 149 30 chr2 211879327 211879495 -41377088 - L3 LINE CR1 -112 1465 1278 1258 153 31 14 chr2 211879563 211879786 -41376797 + AluJo SINE Alu 84 310 -2 1943 132 33 7 chr2 211879795 211880099 -41376484 + AluSq SINE Alu 1 312 -1 1204 128 204 0 chr2 211880223 211880449 -41376134 + AluSg SINE Alu 26 297 -13 1994 125 7 33 chr2 211880588 211880892 -41375691 + AluSx SINE Alu 1 296 -16 538 211 138 0 chr2 211880892 211881001 -41375582 - AluJo/FLAM SINE Alu -178 124 1 285 231 93 37 chr2 211881234 211881342 -41375241 - L2 LINE L2 -1 3312 3199 2039 123 14 0 chr2 211881411 211881704 -41374879 - AluSx SINE Alu -15 297 1 249 280 112 0 chr2 211881774 211881899 -41374684 + MIR SINE MIR 122 260 -2 1191 88 12 35 chr2 211883726 211883896 -41372687 - AluSg/x SINE Alu -12 300 135 2223 62 39 59 chr2 211883897 211884202 -41372381 - AluYa5 SINE Alu -12 299 1 1831 164 27 0 chr2 211884474 211884773 -41371810 + AluJb SINE Alu 1 307 -5 2175 129 3 3 chr2 211884774 211885083 -41371500 + AluSx SINE Alu 2 310 -2 419 128 308 0 chr2 211885109 211885187 -41371396 - FLAM_C SINE Alu -36 107 6 640 218 183 5 chr2 211885400 211885597 -41370986 + MIR SINE MIR 18 249 -13 22 0 0 0 chr2 211885789 211885811 -41370772 + AT_rich Low_complexity Low_complexity 1 22 0 1839 114 43 21 chr2 211885836 211886116 -41370467 - AluSg SINE Alu -24 286 1 196 245 118 29 chr2 211886322 211886424 -41370159 + MIR SINE MIR 109 219 -43 22 0 0 0 chr2 211886640 211886662 -41369921 + AT_rich Low_complexity Low_complexity 1 22 0 2063 90 43 11 chr2 211886687 211886966 -41369617 - AluSx SINE Alu -24 288 1 352 260 10 0 chr2 211887074 211887170 -41369413 + L1ME LINE L1 5535 5631 -490 2428 78 0 0 chr2 211887228 211887521 -41369062 + AluSc SINE Alu 2 294 -15 274 159 0 0 chr2 211887526 211887570 -41369013 + Alu SINE Alu 1 44 -256 1136 145 24 148 chr2 211887570 211887907 -41368676 + AluJo SINE Alu 1 295 -7 250 150 0 0 chr2 211887931 211887971 -41368612 + Alu SINE Alu 1 40 -262 1095 93 7 20 chr2 211888095 211888246 -41368337 - AluSg SINE Alu -161 149 1 1976 138 7 17 chr2 211888255 211888545 -41368038 - AluJb SINE Alu -25 287 1 2118 124 3 7 chr2 211888747 211889045 -41367538 - AluSx SINE Alu -14 298 2 2267 117 0 0 chr2 211889134 211889434 -41367149 + AluSx SINE Alu 1 300 -12 1369 171 40 29 chr2 211889443 211889718 -41366865 + MER44D DNA MER2_type 456 605 0 254 163 153 82 chr2 211890201 211890299 -41366284 - FRAM SINE Alu -41 125 21 1050 159 0 0 chr2 211890324 211890487 -41366096 - AluSg/x SINE Alu -13 299 137 1866 90 7 77 chr2 211890562 211890872 -41365711 + AluSp SINE Alu 2 289 -24 2267 85 7 10 chr2 211891050 211891344 -41365239 - AluSp SINE Alu -19 294 2 363 152 95 76 chr2 211891455 211891560 -41365023 - L1MB7 LINE L1 -28 6156 6050 265 299 0 41 chr2 211892585 211892732 -41363851 + L2 LINE L2 2233 2373 -941 321 267 178 44 chr2 211892765 211892982 -41363601 + L2 LINE L2 2486 2747 -567 2297 67 0 54 chr2 211892982 211893296 -41363287 + AluSq SINE Alu 1 297 -16 321 267 178 44 chr2 211893296 211893348 -41363235 + L2 LINE L2 2747 2791 -523 2334 84 3 3 chr2 211894009 211894307 -41362276 - AluSx SINE Alu 0 312 15 332 179 36 0 chr2 211894605 211894689 -41361894 - AluJ/FLAM SINE Alu -215 87 1 2359 101 3 0 chr2 211895038 211895344 -41361239 - AluSp SINE Alu 0 313 7 724 107 0 0 chr2 211895533 211895636 -41360947 + AluSg/x SINE Alu 188 290 -20 2217 104 0 38 chr2 211895758 211896074 -41360509 - AluSx SINE Alu -8 304 1 448 132 0 0 chr2 211896121 211896189 -41360394 + AluJ/FRAM SINE Alu 229 296 -16 2284 114 0 0 chr2 211896710 211897016 -41359567 - AluSg1 SINE Alu -3 306 1 2398 91 3 0 chr2 211897153 211897450 -41359133 - AluSp SINE Alu -15 298 1 286 161 54 0 chr2 211897821 211897866 -41358717 - L2 LINE L2 -1 3312 3262 2263 95 7 13 chr2 211897866 211898170 -41358413 - AluSg SINE Alu -8 302 1 2197 72 41 3 chr2 211898181 211898473 -41358110 - AluSp SINE Alu -7 306 4 259 271 0 14 chr2 211898475 211898545 -41358038 - L2 LINE L2 -38 3275 3207 1862 136 4 0 chr2 211898712 211898969 -41357614 - AluSx SINE Alu -54 258 1 2191 121 3 0 chr2 211899539 211899846 -41356737 + AluSg SINE Alu 1 308 -2 2230 94 0 14 chr2 211899870 211900181 -41356402 + AluSp SINE Alu 1 307 0 1048 161 85 62 chr2 211900208 211900301 -41356282 + AluJb SINE Alu 54 143 -169 2259 110 0 3 chr2 211900301 211900611 -41355972 + AluSq SINE Alu 1 309 -4 1048 161 85 62 chr2 211900611 211900741 -41355842 + AluJb SINE Alu 143 282 -30 2271 135 0 0 chr2 211901141 211901453 -41355130 + AluSx SINE Alu 1 312 0 2248 101 3 0 chr2 211901460 211901756 -41354827 + AluSq SINE Alu 1 297 -16 2430 78 7 0 chr2 211902092 211902398 -41354185 - AluY SINE Alu -3 308 1 384 301 82 47 chr2 211902472 211902814 -41353769 + L1MEd LINE L1 765 1118 -5087 1145 141 28 6 chr2 211902817 211902994 -41353589 + AluJo SINE Alu 1 181 -131 354 221 43 94 chr2 211903075 211903329 -41353254 + L1MEd LINE L1 1409 1649 -4747 1153 158 14 37 chr2 211903329 211903544 -41353039 - AluSg/x SINE Alu -18 292 83 593 125 11 0 chr2 211903565 211903653 -41352930 + AluJb SINE Alu 206 294 -18 2311 42 11 11 chr2 211903730 211904060 -41352523 + AluY SINE Alu 1 330 0 537 92 13 0 chr2 211904082 211904158 -41352425 + AluSp/q SINE Alu 222 298 -15 25 0 0 0 chr2 211904158 211904183 -41352400 + AT_rich Low_complexity Low_complexity 1 25 0 766 154 0 31 chr2 211904201 211904331 -41352252 + FLAM_C SINE Alu 1 126 -7 346 151 0 0 chr2 211904411 211904464 -41352119 + Alu SINE Alu 245 297 -3 2173 107 0 0 chr2 211904489 211904795 -41351788 + AluSc SINE Alu 1 306 0 863 211 20 39 chr2 211904892 211905052 -41351531 - AluJo SINE Alu -19 293 131 207 0 0 0 chr2 211905052 211905075 -41351508 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2133 119 0 3 chr2 211905075 211905360 -41351223 - AluSq SINE Alu -28 285 2 863 211 20 39 chr2 211905360 211905402 -41351181 - AluJo SINE Alu -179 133 94 1693 122 73 24 chr2 211905402 211905689 -41350894 + THE1B LTR MaLR 1 301 -63 185 0 40 0 chr2 211905689 211905714 -41350869 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1583 51 10 0 chr2 211905717 211905913 -41350670 - L1PA5 LINE L1 -26 6128 5931 523 97 36 12 chr2 211905914 211906004 -41350579 + THE1A LTR MaLR 267 355 0 585 186 0 0 chr2 211906004 211906101 -41350482 - AluJo SINE Alu -214 98 2 2025 217 126 42 chr2 211906163 211906310 -41350273 - MER50 LTR ERV1 -2 732 599 2006 137 0 0 chr2 211906310 211906616 -41349967 - AluSg SINE Alu 0 308 3 2025 217 126 42 chr2 211906616 211907134 -41349449 - MER50 LTR ERV1 -135 599 10 972 195 25 20 chr2 211907142 211907342 -41349241 - MLT1D LTR MaLR 0 505 305 * 1832 224 17 8 chr2 211907340 211907698 -41348885 + MLT1A2 LTR MaLR 12 372 -2 1112 163 49 75 chr2 211907698 211907778 -41348805 - MLT1D LTR MaLR -271 234 153 2248 116 0 3 chr2 211907778 211908088 -41348495 - AluSc SINE Alu 0 309 1 2452 63 3 7 chr2 211908097 211908396 -41348187 - AluSp SINE Alu -15 298 1 1112 163 49 75 chr2 211908396 211908580 -41348003 - MLT1D LTR MaLR -360 145 1 2310 108 0 3 chr2 211908640 211908947 -41347636 - AluSx SINE Alu -6 306 1 3136 123 24 2 chr2 211908975 211909430 -41347153 + LTR9B LTR ERV1 1 465 -179 2303 108 3 0 chr2 211909867 211910174 -41346409 - AluSg SINE Alu -2 308 1 2124 118 3 3 chr2 211910185 211910490 -41346093 - AluSx SINE Alu -7 305 1 1586 144 52 62 chr2 211910526 211910832 -41345751 - AluJb SINE Alu -9 303 1 21 0 0 0 chr2 211910952 211910973 -41345610 + AT_rich Low_complexity Low_complexity 1 21 0 2210 116 13 0 chr2 211911321 211911622 -41344961 - AluSx SINE Alu -7 305 1 1655 235 181 31 chr2 211911906 211912059 -41344524 - L1MC3 LINE L1 0 8042 7913 243 0 0 0 chr2 211912059 211912086 -41344497 + (CA)n Simple_repeat Simple_repeat 2 28 0 1655 235 181 31 chr2 211912086 211912917 -41343666 - L1MC3 LINE L1 -129 7913 6817 1554 170 36 4 chr2 211912919 211913195 -41343388 - AluJb SINE Alu -7 305 21 878 27 20 60 chr2 211913206 211913355 -41343228 - AluYb8 SINE Alu -7 311 169 2111 75 11 0 chr2 211913457 211913725 -41342858 + AluSq SINE Alu 28 298 -15 670 209 102 67 chr2 211913889 211914114 -41342469 - L1MB8 LINE L1 -135 6043 5811 * 3176 175 22 67 chr2 211914109 211914586 -41341997 - L1MB2 LINE L1 0 6171 5735 888 198 204 45 chr2 211914586 211914920 -41341663 + MLT1B LTR MaLR 4 390 0 3176 175 22 67 chr2 211914920 211915163 -41341420 - L1MB2 LINE L1 -436 5735 5483 344 125 16 0 chr2 211915164 211915228 -41341355 + CT-rich Low_complexity Low_complexity 1 65 0 1331 130 0 0 chr2 211915228 211915420 -41341163 - AluSg/x SINE Alu -1 311 120 451 213 46 28 chr2 211915671 211915779 -41340804 - MER20 DNA MER1_type -104 115 6 24 67 0 0 chr2 211916009 211916054 -41340529 + AT_rich Low_complexity Low_complexity 1 45 0 2156 118 3 0 chr2 211916467 211916763 -41339820 - AluSp SINE Alu -16 297 1 919 117 10 7 chr2 211916863 211916882 -41339701 - L1MB8 LINE L1 -501 5620 5603 1827 161 4 0 chr2 211916882 211917202 -41339381 - AluJb SINE Alu 0 321 1 919 117 10 7 chr2 211917202 211917328 -41339255 - L1MB8 LINE L1 -518 5603 5481 628 146 10 0 chr2 211917328 211917424 -41339159 - AluJb SINE Alu -205 107 11 2271 90 10 3 chr2 211917447 211917746 -41338837 - AluY SINE Alu -10 301 1 531 173 78 28 chr2 211917792 211917971 -41338612 + AluSp SINE Alu 2 189 -124 596 171 0 0 chr2 211918112 211918223 -41338360 + L1M4 LINE L1 5374 5484 -694 689 174 54 13 chr2 211918376 211918525 -41338058 + L1MC1 LINE L1 6157 6311 -22 1264 276 144 23 chr2 211918535 211919020 -41337563 - MLT1E LTR MaLR -49 544 1 1708 162 3 66 chr2 211919036 211919369 -41337214 - AluJb SINE Alu 0 312 1 767 192 0 70 chr2 211919380 211919536 -41337047 - FRAM SINE Alu -37 139 1 2677 181 27 40 chr2 211919542 211920090 -41336493 + MER82 DNA MER2_type 113 653 0 198 0 0 0 chr2 211920185 211920207 -41336376 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2070 111 4 4 chr2 211920209 211920489 -41336094 - AluSg SINE Alu -30 280 1 561 308 138 0 chr2 211920756 211920980 -41335603 - MIR SINE MIR -3 259 5 1958 116 27 7 chr2 211921197 211921490 -41335093 - AluSx SINE Alu -13 299 1 2353 94 0 22 chr2 211921889 211922208 -41334375 - AluSp SINE Alu -1 312 1 378 53 0 0 chr2 211922575 211922632 -41333951 - L1MA2 LINE L1 0 6304 6248 837 79 149 0 chr2 211922663 211922777 -41333806 + AluSq/x SINE Alu 1 131 -182 324 231 17 34 chr2 211922956 211923073 -41333510 + L1ME4a LINE L1 5964 6078 -43 863 28 28 9 chr2 211923188 211923297 -41333286 + AluY SINE Alu 17 127 -184 800 258 43 5 chr2 211923500 211923709 -41332874 - MER20 DNA MER1_type -2 217 1 1762 139 49 41 chr2 211924226 211924570 -41332013 - MER7A DNA MER2_type 0 346 2 262 200 73 0 chr2 211924638 211924693 -41331890 - MIR SINE MIR -64 144 86 2234 107 0 0 chr2 211925106 211925396 -41331187 - AluSq SINE Alu -15 298 9 262 306 36 57 chr2 211925477 211925670 -41330913 - L1ME3A LINE L1 -19 6151 5963 369 175 155 10 chr2 211925727 211925830 -41330753 - L1ME3A LINE L1 -223 5947 5830 1905 136 70 0 chr2 211926118 211926404 -41330179 + AluSq SINE Alu 1 306 -7 1184 136 0 0 chr2 211926404 211926573 -41330010 + AluSg/x SINE Alu 132 300 -10 1655 202 3 3 chr2 211926888 211927170 -41329413 - AluJo SINE Alu -30 282 1 2382 100 0 0 chr2 211927170 211927480 -41329103 - AluSq SINE Alu -3 310 1 387 0 0 0 chr2 211927551 211927594 -41328989 + (TTA)n Simple_repeat Simple_repeat 2 44 0 2067 114 7 0 chr2 211927597 211927869 -41328714 - AluSg SINE Alu -36 274 1 249 269 62 8 chr2 211927873 211928003 -41328580 - MER104 DNA Tc2 -43 137 1 284 253 40 40 chr2 211928004 211928103 -41328480 + HsTC2a DNA Tc2 121 219 -525 1023 218 50 57 chr2 211928260 211928678 -41327905 + HsTC2a DNA Tc2 260 674 -68 21 36 0 0 chr2 211928843 211928871 -41327712 + AT_rich Low_complexity Low_complexity 1 28 0 27 0 0 0 chr2 211929144 211929171 -41327412 + AT_rich Low_complexity Low_complexity 1 27 0 28 48 0 0 chr2 211929232 211929274 -41327309 + AT_rich Low_complexity Low_complexity 1 42 0 33 25 0 0 chr2 211929408 211929448 -41327135 + AT_rich Low_complexity Low_complexity 1 40 0 1776 94 8 4 chr2 211929615 211929850 -41326733 + AluSg SINE Alu 1 236 -74 680 181 7 0 chr2 211929850 211929988 -41326595 + L1MC2 LINE L1 5782 5920 -424 2042 142 3 0 chr2 211930243 211930552 -41326031 - AluSg SINE Alu 0 310 1 1370 176 48 7 chr2 211930567 211930839 -41325744 - L1MB5 LINE L1 0 6174 5892 1914 167 8 3 chr2 211930842 211931208 -41325375 - L1MB5 LINE L1 -376 5798 5431 1968 161 7 7 chr2 211931310 211931620 -41324963 + AluSx SINE Alu 1 310 -2 401 354 84 18 chr2 211931895 211932259 -41324324 - L3 LINE CR1 -92 1485 1042 347 256 40 48 chr2 211932327 211932452 -41324131 - MIR SINE MIR -119 143 20 1738 179 0 29 chr2 211932537 211932844 -41323739 - AluJo SINE Alu -14 298 1 242 284 0 0 chr2 211933179 211933246 -41323337 + L1ME LINE L1 5529 5595 -526 511 172 15 139 chr2 211933517 211933689 -41322894 - L1MC5 LINE L1 -107 7854 7725 2223 55 7 20 chr2 211933689 211934009 -41322574 - AluY SINE Alu 0 311 1 511 172 15 139 chr2 211934009 211934103 -41322480 - L1MC5 LINE L1 -236 7725 7621 449 328 132 15 chr2 211934639 211934863 -41321720 - L2 LINE L2 0 3313 3117 2398 103 3 0 chr2 211934863 211935173 -41321410 + AluSp SINE Alu 1 311 -2 2119 123 20 0 chr2 211935181 211935481 -41321102 + AluSx SINE Alu 1 306 -6 449 328 132 15 chr2 211935481 211935573 -41321010 - L2 LINE L2 -202 3111 2950 305 325 53 13 chr2 211935907 211935964 -41320619 + L1M LINE L1 5270 5323 -843 1526 156 106 14 chr2 211935964 211936239 -41320344 + AluJb SINE Alu 1 300 -12 305 325 53 13 chr2 211936239 211936332 -41320251 + L1M LINE L1 5323 5426 -740 324 261 54 0 chr2 211936546 211936638 -41319945 - L1ME LINE L1 -5394 676 580 270 138 12 125 chr2 211937106 211937186 -41319397 - MLT1H LTR MaLR 0 549 479 1617 190 40 0 chr2 211938172 211938472 -41318111 - AluJb SINE Alu 0 312 1 722 200 0 0 chr2 211938472 211938607 -41317976 - AluJo SINE Alu -177 135 1 2238 101 7 0 chr2 211938670 211938968 -41317615 - AluSq SINE Alu -8 305 6 1261 91 0 0 chr2 211938998 211939152 -41317431 - AluSg/x SINE Alu -17 293 140 2177 106 33 0 chr2 211939159 211939461 -41317122 - AluSq SINE Alu -1 312 1 308 229 19 29 chr2 211939600 211939705 -41316878 - L1ME LINE L1 -5961 109 6 2075 145 0 3 chr2 211940103 211940406 -41316177 + AluSx SINE Alu 1 302 -10 422 218 10 40 chr2 211942303 211942404 -41314179 + AluJ/FLAM SINE Alu 1 98 -214 787 235 22 6 chr2 211942527 211942706 -41313877 + AluJb SINE Alu 116 297 -15 24 32 0 0 chr2 211942946 211942977 -41313606 + AT_rich Low_complexity Low_complexity 1 31 0 1780 181 3 16 chr2 211943006 211943316 -41313267 + AluJb SINE Alu 6 311 -1 2411 77 0 3 chr2 211943354 211943653 -41312930 + AluSg SINE Alu 1 298 -12 1698 198 3 3 chr2 211943676 211943974 -41312609 + AluJo SINE Alu 1 298 -14 3234 132 11 0 chr2 211944047 211944650 -41311933 + L1P4 LINE L1 5174 5786 -380 2304 84 7 3 chr2 211944650 211944948 -41311635 + AluSp SINE Alu 1 299 -14 192 40 0 0 chr2 211945076 211945101 -41311482 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1993 122 0 27 chr2 211945104 211945399 -41311184 - AluSg SINE Alu -23 287 1 2349 119 0 0 chr2 211945424 211945734 -41310849 - AluSx SINE Alu 0 312 3 203 152 22 0 chr2 211946040 211946086 -41310497 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 180 0 0 0 chr2 211946464 211946484 -41310099 + (TA)n Simple_repeat Simple_repeat 1 20 0 * 288 0 0 0 chr2 211946483 211946515 -41310068 + (GA)n Simple_repeat Simple_repeat 2 33 0 2104 131 0 3 chr2 211946653 211946950 -41309633 - AluSx SINE Alu -14 298 3 33 0 0 42 chr2 211947059 211947086 -41309497 + AT_rich Low_complexity Low_complexity 1 27 -19 1594 160 3 77 chr2 211947086 211947399 -41309184 + AluJo SINE Alu 1 290 -22 33 0 0 42 chr2 211947399 211947419 -41309164 + AT_rich Low_complexity Low_complexity 27 46 0 2116 86 6 10 chr2 211948254 211948567 -41308016 - L1PA13 LINE L1 -4 6159 5848 1888 132 23 18 chr2 211948567 211949252 -41307331 + L1PA13 LINE L1 5034 5822 -346 294 197 0 0 chr2 211949739 211949800 -41306783 - FAM SINE Alu -1 178 118 1152 222 40 8 chr2 211949813 211950065 -41306518 - AluJo SINE Alu -52 260 1 2311 86 14 0 chr2 211950127 211950417 -41306166 + AluSx SINE Alu 1 294 -18 377 118 15 0 chr2 211950837 211950905 -41305678 - L1PA5 LINE L1 0 6154 6086 2096 91 35 3 chr2 211951151 211951438 -41305145 - AluSg SINE Alu -12 298 3 253 164 36 18 chr2 211951489 211951544 -41305039 - L1M4 LINE L1 -2292 3854 3799 2064 118 7 7 chr2 211951612 211951934 -41304649 - AluSq SINE Alu 0 313 1 22 70 0 0 chr2 211952031 211952074 -41304509 + AT_rich Low_complexity Low_complexity 1 43 0 180 290 58 29 chr2 211952193 211952262 -41304321 + MIR3 SINE MIR 130 200 -8 2306 94 7 3 chr2 211952799 211953106 -41303477 + AluSp SINE Alu 1 308 -5 481 228 38 13 chr2 211953112 211953270 -41303313 - L1MB7 LINE L1 -16 6168 6007 21 57 0 0 chr2 211953668 211953703 -41302880 + AT_rich Low_complexity Low_complexity 1 35 0 756 168 49 65 chr2 211953865 211954007 -41302576 + AluJb SINE Alu 129 269 -43 2303 89 3 0 chr2 211954007 211954310 -41302273 - AluY SINE Alu -7 304 1 756 168 49 65 chr2 211954310 211954352 -41302231 + AluJb SINE Alu 269 310 -2 1677 150 55 7 chr2 211954353 211954660 -41301923 - MER47A DNA MER2_type -44 322 1 264 297 169 17 chr2 211955862 211955980 -41300603 - L2 LINE L2 0 3272 3137 2118 103 0 0 chr2 211956844 211957116 -41299467 + AluSx SINE Alu 1 272 -40 2066 141 13 0 chr2 211957452 211957751 -41298832 - AluSp SINE Alu -10 303 1 2448 84 0 7 chr2 211957754 211958064 -41298519 - AluY SINE Alu -3 308 1 251 227 0 0 chr2 211958175 211958241 -41298342 - L1MB7 LINE L1 -1956 5829 5764 184 358 106 0 chr2 211958248 211958371 -41298212 - MIR SINE MIR -120 142 7 302 239 11 0 chr2 211958981 211959073 -41297510 + CT-rich Low_complexity Low_complexity 3 95 0 1970 106 92 0 chr2 211959093 211959366 -41297217 + AluSq SINE Alu 1 298 -15 2205 112 0 0 chr2 211959366 211959662 -41296921 + AluSg SINE Alu 1 296 -14 232 233 0 23 chr2 211959977 211960063 -41296520 + (TA)n Simple_repeat Simple_repeat 1 84 0 293 0 27 0 chr2 211960068 211960105 -41296478 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 6166 72 14 26 chr2 211960105 211961753 -41294830 - SVA Other Other -683 1363 9 1981 127 3 14 chr2 211961763 211962055 -41294528 - AluJb SINE Alu -23 289 1 2376 89 10 0 chr2 211962232 211962535 -41294048 + AluSp SINE Alu 1 306 -7 1939 133 14 7 chr2 211962539 211962833 -41293750 - AluJo SINE Alu -12 300 5 1148 142 0 15 chr2 211963140 211963344 -41293239 + L1MB4 LINE L1 5980 6180 0 1964 104 13 24 chr2 211963481 211963779 -41292804 + AluSg SINE Alu 1 295 -15 2052 118 3 34 chr2 211963814 211964097 -41292486 + AluSx SINE Alu 1 274 -38 321 26 0 0 chr2 211964097 211964135 -41292448 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 2052 118 3 34 chr2 211964135 211964173 -41292410 + AluSx SINE Alu 274 312 0 1300 175 25 5 chr2 211964440 211964483 -41292100 + L1MB2 LINE L1 5854 5895 -276 2297 116 0 3 chr2 211964483 211964794 -41291789 + AluSq SINE Alu 1 310 -3 1300 175 25 5 chr2 211964794 211965037 -41291546 + L1MB2 LINE L1 5895 6144 -27 1463 148 108 4 chr2 211965059 211965309 -41291274 + AluJo SINE Alu 7 282 -30 21 57 0 0 chr2 211965403 211965438 -41291145 + AT_rich Low_complexity Low_complexity 1 35 0 223 269 77 26 chr2 211965631 211965709 -41290874 + L2 LINE L2 3232 3313 0 951 161 0 7 chr2 211965784 211965939 -41290644 + AluSx SINE Alu 9 162 -150 345 229 48 12 chr2 211965943 211966026 -41290557 + MER5A DNA MER1_type 103 188 -1 1196 176 13 34 chr2 211966802 211967041 -41289542 - AluJb SINE Alu -78 234 1 1808 133 31 14 chr2 211967145 211967438 -41289145 - AluSx SINE Alu -14 298 1 256 294 50 42 chr2 211967659 211967778 -41288805 + MER20B DNA MER1_type 45 164 -619 1149 218 37 65 chr2 211967872 211967940 -41288643 + MLT1C LTR MaLR 116 184 -283 1992 135 13 3 chr2 211967940 211968244 -41288339 + AluSx SINE Alu 1 307 -5 1149 218 37 65 chr2 211968244 211968529 -41288054 + MLT1C LTR MaLR 184 459 -8 846 127 0 0 chr2 211968657 211968775 -41287808 + FLAM_C SINE Alu 1 118 -25 2395 68 10 10 chr2 211968787 211969096 -41287487 - AluY SINE Alu -2 309 1 2221 65 0 46 chr2 211969096 211969403 -41287180 - AluY SINE Alu -18 293 1 308 82 0 20 chr2 211969415 211969464 -41287119 + (GGAA)n Simple_repeat Simple_repeat 1 48 0 389 218 113 16 chr2 211969615 211969739 -41286844 + Tigger5 DNA MER2_type 20 155 -2168 1378 200 33 8 chr2 211969741 211969986 -41286597 - AluJo SINE Alu -61 251 1 2038 111 3 66 chr2 211970093 211970426 -41286157 + AluSx SINE Alu 1 312 0 3287 141 54 8 chr2 211970451 211970821 -41285762 + L1MB2 LINE L1 5158 5510 -661 1610 155 36 63 chr2 211970821 211970957 -41285626 + AluJo SINE Alu 1 139 -173 2334 94 0 7 chr2 211970957 211971255 -41285328 + AluSg SINE Alu 1 296 -14 1610 155 36 63 chr2 211971255 211971421 -41285162 + AluJo SINE Alu 139 295 -17 3287 141 54 8 chr2 211971421 211971966 -41284617 + L1MB2 LINE L1 5510 6168 -3 2752 173 45 72 chr2 211972043 211972317 -41284266 + L1M4 LINE L1 4407 4687 -1459 2216 115 3 3 chr2 211972317 211972629 -41283954 + AluSq SINE Alu 1 312 -1 2752 173 45 72 chr2 211972629 211972815 -41283768 + L1M4 LINE L1 4687 4876 -1270 2487 71 0 7 chr2 211972815 211973124 -41283459 - AluY SINE Alu -4 307 1 2752 173 45 72 chr2 211973124 211973366 -41283217 + L1M4 LINE L1 4876 5091 -1055 2494 69 7 0 chr2 211973367 211973671 -41282912 + AluSp SINE Alu 1 306 -7 1932 133 14 7 chr2 211973675 211973969 -41282614 - AluJo SINE Alu -12 300 5 1219 152 35 17 chr2 211974249 211974480 -41282103 + L1MB4 LINE L1 5946 6180 0 1967 105 17 20 chr2 211974617 211974913 -41281670 + AluSg SINE Alu 1 295 -15 2004 129 0 17 chr2 211974948 211975250 -41281333 + AluSx SINE Alu 1 297 -15 2321 95 0 7 chr2 211975285 211975591 -41280992 + AluSx SINE Alu 1 304 -8 24 53 0 0 chr2 211975663 211975701 -41280882 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr2 211975973 211975995 -41280588 + AT_rich Low_complexity Low_complexity 1 22 0 213 255 20 0 chr2 211976463 211976514 -41280069 + GA-rich Low_complexity Low_complexity 4 55 0 233 352 58 8 chr2 211977512 211977647 -41278936 - MIR SINE MIR -65 143 2 21 82 0 0 chr2 211977757 211977806 -41278777 + AT_rich Low_complexity Low_complexity 1 49 0 1384 204 57 14 chr2 211977934 211978214 -41278369 + AluJo SINE Alu 1 292 -20 2291 103 10 0 chr2 211978605 211978906 -41277677 + AluSx SINE Alu 1 304 -8 26 30 0 0 chr2 211979487 211979520 -41277063 + AT_rich Low_complexity Low_complexity 1 33 0 2295 88 3 3 chr2 211979668 211979963 -41276620 + AluSx SINE Alu 1 295 -17 516 106 0 0 chr2 211979965 211980050 -41276533 + (TA)n Simple_repeat Simple_repeat 2 86 0 624 97 86 32 chr2 211980694 211980787 -41275796 + FRAM SINE Alu 59 156 -20 953 122 0 7 chr2 211980796 211980935 -41275648 + AluSg/x SINE Alu 164 301 -11 916 242 59 111 chr2 211981025 211981526 -41275057 - HAL1 LINE L1 -752 1755 1293 1737 201 10 0 chr2 211981526 211981835 -41274748 - AluJo SINE Alu 0 312 1 916 242 59 111 chr2 211981835 211981974 -41274609 - HAL1 LINE L1 -1214 1293 1148 323 202 35 9 chr2 211982797 211982911 -41273672 + C-rich Low_complexity Low_complexity 3 119 0 329 242 159 8 chr2 211984137 211984269 -41272314 + L1ME4a LINE L1 5961 6112 -9 2109 142 0 0 chr2 211984280 211984590 -41271993 - AluSg SINE Alu 0 310 1 459 0 0 0 chr2 211984592 211984643 -41271940 + (TTTTG)n Simple_repeat Simple_repeat 2 52 0 698 170 62 0 chr2 211984643 211984755 -41271828 - FLAM_C SINE Alu -23 120 2 22 56 0 0 chr2 211984787 211984823 -41271760 + AT_rich Low_complexity Low_complexity 1 36 0 351 200 0 0 chr2 211984929 211984989 -41271594 - AluJo/FRAM SINE Alu -35 267 208 285 150 0 0 chr2 211984976 211985016 -41271567 - Alu SINE Alu -247 53 14 * 2279 103 3 0 chr2 211985189 211985490 -41271093 + AluSx SINE Alu 1 302 -10 2244 119 0 3 chr2 211985490 211985785 -41270798 + AluSx SINE Alu 1 294 -18 1019 204 12 0 chr2 211985994 211986166 -41270417 + FAM SINE Alu 1 174 -1 317 324 7 29 chr2 211986187 211986326 -41270257 + MER112 DNA MER1_type 108 243 -17 2626 169 20 130 chr2 211986565 211987228 -41269355 - L1ME1 LINE L1 -5 6161 5597 1776 106 8 0 chr2 211987228 211987465 -41269118 + AluSg/x SINE Alu 72 310 0 2626 169 20 130 chr2 211987465 211987592 -41268991 - L1ME1 LINE L1 -569 5597 5458 1592 194 0 14 chr2 211987615 211987776 -41268807 - AluJo SINE Alu -33 279 122 2367 84 0 16 chr2 211987776 211988085 -41268498 + AluY SINE Alu 1 304 -7 1592 194 0 14 chr2 211988085 211988206 -41268377 - AluJo SINE Alu -190 122 1 419 219 0 0 chr2 211988262 211988335 -41268248 + AluJ/FLAM SINE Alu 2 74 -238 855 211 0 0 chr2 211988342 211988484 -41268099 + FRAM SINE Alu 1 139 -37 1896 89 7 51 chr2 211988894 211989187 -41267396 + AluSc SINE Alu 16 295 -14 223 279 0 16 chr2 211990071 211990132 -41266451 + (CA)n Simple_repeat Simple_repeat 1 60 0 207 0 0 0 chr2 211990355 211990378 -41266205 + (CGG)n Simple_repeat Simple_repeat 3 25 0 324 274 0 32 chr2 211990679 211990803 -41265780 + (CGG)n Simple_repeat Simple_repeat 3 122 0 24 53 0 0 chr2 211991723 211991761 -41264822 + AT_rich Low_complexity Low_complexity 1 38 0 2321 95 0 7 chr2 211991833 211992139 -41264444 - AluSx SINE Alu -8 304 1 2019 126 0 17 chr2 211992175 211992477 -41264106 - AluSx SINE Alu -15 297 1 1891 110 24 14 chr2 211992512 211992804 -41263779 - AluSg SINE Alu -15 295 1 246 160 174 14 chr2 211992924 211993068 -41263515 - L1MB3 LINE L1 0 6183 6017 2075 100 4 0 chr2 211993196 211993466 -41263117 - AluSp SINE Alu -42 271 1 475 152 0 2 chr2 211993469 211993552 -41263031 + HAL1b LINE L1 501 1666 -781 2315 63 7 13 chr2 211997633 211997934 -41258649 - AluY SINE Alu -12 299 1 362 0 62 0 chr2 211998742 211998790 -41257793 + (GAAAA)n Simple_repeat Simple_repeat 5 55 0 832 228 84 25 chr2 211998790 211999075 -41257508 - HAL1 LINE L1 -940 1567 1266 278 264 160 40 chr2 211999081 211999206 -41257377 + LTR33 LTR ERVL 55 194 -327 572 250 56 56 chr2 211999397 211999629 -41256954 + LTR33 LTR ERVL 282 513 -8 1422 118 110 46 chr2 211999636 211999899 -41256684 - AluJo SINE Alu -12 300 21 489 215 0 23 chr2 211999911 212000041 -41256542 - HAL1 LINE L1 -1323 1184 1058 * 1231 165 119 10 chr2 212000016 212000314 -41256269 - L1MB3 LINE L1 -2 6181 5899 275 170 149 32 chr2 212000366 212000460 -41256123 - HAL1 LINE L1 -1554 953 849 1650 157 27 17 chr2 212000817 212001117 -41255466 - AluJo SINE Alu -9 303 1 692 294 23 53 chr2 212003212 212003332 -41253251 - MIR SINE MIR -2 260 138 2287 100 3 0 chr2 212003332 212003621 -41252962 - AluSg SINE Alu -20 290 1 692 294 23 53 chr2 212003621 212003762 -41252821 - MIR SINE MIR -124 138 7 351 275 25 0 chr2 212003820 212003900 -41252683 + MIR SINE MIR 32 113 -149 2385 108 0 0 chr2 212004650 212004955 -41251628 + AluSg SINE Alu 1 305 -5 11800 25 0 0 chr2 212004958 212007024 -41249559 + L1PA3 LINE L1 4088 6152 -3 31 0 0 0 chr2 212007024 212007055 -41249528 + AT_rich Low_complexity Low_complexity 1 31 0 577 278 37 0 chr2 212007394 212007556 -41249027 - MIR3 SINE MIR -6 202 35 568 246 89 39 chr2 212007844 212008023 -41248560 + MIR3 SINE MIR 11 198 -10 1097 126 0 0 chr2 212008147 212008306 -41248277 - AluSg/x SINE Alu -8 304 146 2445 58 0 13 chr2 212008886 212009196 -41247387 - AluY SINE Alu -5 306 1 2088 116 0 0 chr2 212009209 212009501 -41247082 - AluSx SINE Alu -16 296 5 828 159 0 0 chr2 212010657 212010783 -41245800 + AluJb SINE Alu 1 126 -186 874 203 0 0 chr2 212011071 212011219 -41245364 + AluJb SINE Alu 141 288 -24 324 177 191 70 chr2 212011276 212011491 -41245092 - L1ME4a LINE L1 -39 6082 5842 2052 144 0 0 chr2 212011518 212011810 -41244773 - AluSx SINE Alu -20 292 1 1269 142 37 14 chr2 212011930 212012252 -41244331 + MLT1B LTR MaLR 5 390 0 428 231 122 26 chr2 212012252 212012408 -41244175 - L1ME4a LINE L1 -380 5741 5571 31 0 0 0 chr2 212012540 212012571 -41244012 + AT_rich Low_complexity Low_complexity 1 31 0 1977 113 0 0 chr2 212012669 212012934 -41243649 - AluSq SINE Alu -48 265 1 721 128 54 27 chr2 212012934 212013083 -41243500 + L1MB3 LINE L1 6029 6181 -2 359 179 0 0 chr2 212013132 212013199 -41243384 + L1MC1 LINE L1 5184 5250 -896 1343 177 147 34 chr2 212013211 212013476 -41243107 + AluJb SINE Alu 1 295 -7 709 230 0 0 chr2 212013521 212013647 -41242936 - FLAM_A SINE Alu -7 126 1 1665 64 17 72 chr2 212013676 212013911 -41242672 + L1PB1 LINE L1 5928 6149 -2 21 36 0 0 chr2 212013934 212013962 -41242621 + AT_rich Low_complexity Low_complexity 1 28 0 5356 143 56 26 chr2 212013972 212014039 -41242544 + L1MC1 LINE L1 5263 5327 -1006 2223 76 0 36 chr2 212014039 212014340 -41242243 + AluY SINE Alu 1 290 -21 5356 143 56 26 chr2 212014340 212014678 -41241905 + L1MC1 LINE L1 5327 5653 -680 767 187 0 43 chr2 212014678 212014817 -41241766 + FLAM_A SINE Alu 1 133 0 5356 143 56 26 chr2 212014817 212015450 -41241133 + L1MC1 LINE L1 5653 6333 0 2323 87 0 28 chr2 212015455 212015776 -41240807 + AluSx SINE Alu 1 312 0 655 309 148 20 chr2 212015914 212016373 -41240210 + L2 LINE L2 2377 2894 -420 323 190 29 153 chr2 212016473 212016610 -41239973 + L2 LINE L2 3164 3283 -30 545 139 0 0 chr2 212016653 212016732 -41239851 - AluSq SINE Alu -100 213 135 2101 95 7 20 chr2 212016743 212017048 -41239535 - AluSx SINE Alu -11 301 1 2154 92 7 0 chr2 212017111 212017395 -41239188 - AluSx SINE Alu -26 286 1 2251 103 7 0 chr2 212018164 212018464 -41238119 - AluSx SINE Alu -10 302 1 2122 108 0 16 chr2 212018866 212019173 -41237410 + AluSg SINE Alu 1 302 -8 244 211 53 18 chr2 212019705 212019762 -41236821 - Charlie8 DNA MER1_type -2333 84 26 2168 122 6 10 chr2 212019973 212020284 -41236299 - AluSx SINE Alu -2 310 1 2297 104 13 0 chr2 212020497 212020805 -41235778 - AluSp SINE Alu -1 312 1 2215 110 0 10 chr2 212020932 212021232 -41235351 - AluSc SINE Alu -12 297 1 1647 177 0 18 chr2 212021464 212021747 -41234836 + AluJo SINE Alu 15 292 -20 2196 85 0 3 chr2 212021749 212022031 -41234552 + AluY SINE Alu 1 302 0 190 0 0 0 chr2 212022031 212022052 -41234531 + (TAAA)n Simple_repeat Simple_repeat 2 172 0 242 209 164 0 chr2 212022060 212022127 -41234456 - LTR33 LTR ERVL -441 80 3 664 87 87 22 chr2 212022826 212022964 -41233619 - AluSg/x SINE Alu -7 305 159 259 195 156 0 chr2 212022964 212023041 -41233542 - L1ME LINE L1 -477 5687 5599 2069 116 3 29 chr2 212023088 212023399 -41233184 + AluSg SINE Alu 1 303 -7 2035 127 13 17 chr2 212023553 212023714 -41232869 - AluSx SINE Alu -14 298 137 2211 100 31 0 chr2 212023714 212024004 -41232579 - AluSg SINE Alu -11 299 1 2035 127 13 17 chr2 212024004 212024141 -41232442 - AluSx SINE Alu -175 137 1 2109 119 3 22 chr2 212025528 212025846 -41230737 - AluSx SINE Alu 0 312 1 873 148 0 15 chr2 212028515 212028650 -41227933 + AluJo/FLAM SINE Alu 1 133 -169 1414 65 12 0 chr2 212028653 212028821 -41227762 + AluSx SINE Alu 1 170 -142 365 169 14 0 chr2 212028821 212028892 -41227691 + AluSp/q SINE Alu 231 302 -1 2239 106 0 16 chr2 212028899 212029033 -41227550 + AluSq SINE Alu 1 136 -177 2046 113 3 7 chr2 212029033 212029315 -41227268 + AluSg1 SINE Alu 1 281 -28 459 0 0 0 chr2 212029315 212029366 -41227217 + (CA)n Simple_repeat Simple_repeat 2 52 0 2239 106 0 16 chr2 212029366 212029533 -41227050 + AluSq SINE Alu 134 298 -15 948 180 0 0 chr2 212029887 212030037 -41226546 + AluJo SINE Alu 1 150 -162 1596 121 5 0 chr2 212030038 212030262 -41226321 - AluSx SINE Alu -87 225 1 2369 87 7 0 chr2 212030462 212030762 -41225821 + AluSp SINE Alu 1 302 -11 1927 142 3 10 chr2 212030868 212031170 -41225413 + AluSx SINE Alu 1 300 -12 21 36 0 0 chr2 212034285 212034313 -41222270 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 212034488 212034509 -41222074 + AT_rich Low_complexity Low_complexity 1 21 0 681 231 39 2 chr2 212034753 212034949 -41221634 - MIR SINE MIR -58 204 3 2085 116 7 17 chr2 212035002 212035303 -41221280 + AluSg SINE Alu 1 298 -12 21 0 0 0 chr2 212035899 212035920 -41220663 + AT_rich Low_complexity Low_complexity 1 21 0 2230 90 3 10 chr2 212036616 212036917 -41219666 + AluY SINE Alu 1 299 -12 312 307 107 15 chr2 212036975 212037180 -41219403 - L3b LINE CR1 -195 1388 1165 29 0 0 0 chr2 212039723 212039752 -41216831 + AT_rich Low_complexity Low_complexity 1 29 0 2679 20 0 0 chr2 212039752 212040047 -41216536 + AluY SINE Alu 1 295 -16 633 279 67 0 chr2 212040058 212040237 -41216346 - MIR SINE MIR -1 261 71 2363 85 3 10 chr2 212040325 212040632 -41215951 + AluSp SINE Alu 1 305 -8 2425 101 0 0 chr2 212041692 212042000 -41214583 + AluSg SINE Alu 1 308 -2 870 152 0 14 chr2 212042880 212043025 -41213558 + FLAM_C SINE Alu 1 143 0 23 54 0 0 chr2 212043260 212043297 -41213286 + AT_rich Low_complexity Low_complexity 1 37 0 2370 65 3 35 chr2 212043535 212043845 -41212738 + AluSp SINE Alu 1 300 -13 1657 76 202 53 chr2 212044128 212044390 -41212193 - AluY SINE Alu 0 301 1 2226 115 0 28 chr2 212044617 212044976 -41211607 + AluSx SINE Alu 1 350 0 1160 102 17 23 chr2 212046000 212046176 -41210407 - AluSg/x SINE Alu -4 306 132 2012 132 6 28 chr2 212046176 212046495 -41210088 - AluSx SINE Alu 0 312 1 1654 151 0 45 chr2 212046875 212047039 -41209544 - AluJb SINE Alu -5 307 162 4531 120 37 15 chr2 212047039 212047712 -41208871 + LTR12 LTR ERV1 1 688 0 1654 151 0 45 chr2 212047712 212047858 -41208725 - AluJb SINE Alu -150 162 11 265 278 9 19 chr2 212047877 212047888 -41208695 - L1MA4A LINE L1 -8 6295 6285 1969 167 74 16 chr2 212047888 212048031 -41208552 - L1PB4 LINE L1 -4 6152 6010 1923 216 135 8 chr2 212048031 212048512 -41208071 - L1MA4A LINE L1 -301 5996 5455 726 105 0 35 chr2 212048528 212048642 -41207941 - FLAM_C SINE Alu 0 143 34 459 133 78 0 chr2 212048650 212048740 -41207843 - L1PB4 LINE L1 -716 5440 5344 1793 154 11 11 chr2 212048745 212049031 -41207552 + AluSx SINE Alu 5 290 -22 573 197 13 13 chr2 212049047 212049199 -41207384 + GA-rich Low_complexity Low_complexity 1 152 0 726 155 0 75 chr2 212049201 212049375 -41207208 - L1PB4 LINE L1 -795 5351 5191 282 217 17 0 chr2 212049375 212049435 -41207148 + CT-rich Low_complexity Low_complexity 3 63 0 186 43 0 0 chr2 212050554 212050577 -41206006 + (CCG)n Simple_repeat Simple_repeat 3 25 0 320 279 70 127 chr2 212050617 212050933 -41205650 - L1M2 LINE L1 -5876 973 676 2218 84 28 0 chr2 212051859 212052146 -41204437 - AluSq SINE Alu -18 295 1 1981 120 3 0 chr2 212052197 212052480 -41204103 - AluSx SINE Alu -2 310 27 198 288 0 76 chr2 212052667 212052733 -41203850 - MIR SINE MIR -183 79 19 2211 112 3 3 chr2 212052823 212053126 -41203457 - AluSx SINE Alu -9 303 1 216 0 0 0 chr2 212053522 212053546 -41203037 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 508 82 14 0 chr2 212053637 212053710 -41202873 + AluS SINE Alu 2 75 -237 343 292 200 5 chr2 212054532 212054717 -41201866 + MIR SINE MIR 4 224 -38 210 280 0 0 chr2 212054862 212054912 -41201671 + MER5A DNA MER1_type 3 52 -137 2161 105 0 3 chr2 212054937 212055223 -41201360 + AluSq SINE Alu 1 285 -28 432 0 0 0 chr2 212055245 212055293 -41201290 + (TA)n Simple_repeat Simple_repeat 2 49 0 1788 153 14 7 chr2 212055566 212055861 -41200722 - AluSx SINE Alu -15 297 1 530 232 148 26 chr2 212056380 212056535 -41200048 + MIR SINE MIR 15 188 -74 2493 82 3 0 chr2 212056581 212056887 -41199696 - AluSq SINE Alu -5 308 2 2153 87 16 42 chr2 212056892 212057202 -41199381 - AluSg SINE Alu -8 302 1 189 0 0 0 chr2 212057294 212057315 -41199268 + (TA)n Simple_repeat Simple_repeat 2 22 0 252 305 165 55 chr2 212057439 212058403 -41198180 - L2 LINE L2 -816 2498 1429 2802 227 133 59 chr2 212058486 212058651 -41197932 - HAL1 LINE L1 -1 2506 2355 2206 130 0 0 chr2 212058651 212058959 -41197624 - AluSx SINE Alu -4 308 1 2802 227 133 59 chr2 212058959 212060066 -41196517 - HAL1 LINE L1 -152 2355 1140 21 71 0 0 chr2 212060066 212060108 -41196475 + AT_rich Low_complexity Low_complexity 1 42 0 674 138 0 0 chr2 212060108 212060202 -41196381 - FLAM_C SINE Alu -25 118 25 2518 41 6 19 chr2 212060223 212060537 -41196046 - AluY SINE Alu 0 311 2 2363 58 3 7 chr2 212060560 212060854 -41195729 - AluSx SINE Alu -19 293 1 1785 150 56 0 chr2 212060974 212061260 -41195323 - AluSx SINE Alu -10 302 1 297 285 156 11 chr2 212061261 212061447 -41195136 - HAL1 LINE L1 -1666 841 629 3999 220 93 16 chr2 212061494 212062659 -41193924 - Charlie6 DNA MER1_type 0 3500 2246 1861 125 3 28 chr2 212063177 212063464 -41193119 + AluSx SINE Alu 1 280 -32 222 171 0 0 chr2 212063493 212063534 -41193049 + (TATG)n Simple_repeat Simple_repeat 4 44 0 468 266 23 73 chr2 212063551 212063700 -41192883 - L1MC/D LINE L1 -2019 5789 5653 2111 106 33 0 chr2 212063700 212064001 -41192582 - AluSx SINE Alu -1 311 1 468 266 23 73 chr2 212064001 212064069 -41192514 - L1MC/D LINE L1 -2155 5653 5583 2183 126 0 3 chr2 212064492 212064801 -41191782 - AluSx SINE Alu -3 309 2 207 100 0 0 chr2 212064801 212064831 -41191752 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 1273 115 25 40 chr2 212064831 212065031 -41191552 - AluSq SINE Alu -27 286 90 322 232 49 0 chr2 212065033 212065115 -41191468 - L1MEc LINE L1 -4543 1853 1768 1988 169 41 35 chr2 212065422 212065968 -41190615 - MLT2A2 LTR ERVL 0 554 1 2167 119 7 0 chr2 212066007 212066310 -41190273 - AluSx SINE Alu -7 305 1 2279 104 0 3 chr2 212066326 212066623 -41189960 - AluSq SINE Alu -17 296 1 2005 106 4 0 chr2 212066758 212067022 -41189561 + AluSp SINE Alu 38 302 -11 1665 189 7 7 chr2 212067052 212067348 -41189235 - AluJb SINE Alu -16 296 1 1754 169 0 10 chr2 212067932 212068222 -41188361 + AluJb SINE Alu 1 287 -25 733 190 0 0 chr2 212068306 212068452 -41188131 - FLAM_C SINE Alu 0 147 2 360 59 0 0 chr2 212069001 212069052 -41187531 + (GA)n Simple_repeat Simple_repeat 2 52 0 183 42 0 0 chr2 212069052 212069076 -41187507 + (TG)n Simple_repeat Simple_repeat 2 25 0 24 0 0 0 chr2 212069138 212069162 -41187421 + AT_rich Low_complexity Low_complexity 1 24 0 249 144 73 2 chr2 212069224 212069279 -41187304 - AluSp SINE Alu -128 175 122 1698 169 77 3 chr2 212070036 212070398 -41186185 - L1ME1 LINE L1 -212 6348 5960 3387 229 101 79 chr2 212070404 212070650 -41185933 - L1ME1 LINE L1 -2391 4149 3910 525 16 0 0 chr2 212070650 212070712 -41185871 + (GA)n Simple_repeat Simple_repeat 2 63 0 216 0 0 0 chr2 212070711 212070735 -41185848 + (TG)n Simple_repeat Simple_repeat 2 25 0 * 3387 229 101 79 chr2 212070712 212070737 -41185846 - L1ME1 LINE L1 -2630 3910 3887 673 117 19 0 chr2 212070737 212070840 -41185743 - HY1 scRNA scRNA -1 111 7 3387 229 101 79 chr2 212070840 212072039 -41184544 - L1ME1 LINE L1 -2653 3887 2716 2078 129 3 3 chr2 212072039 212072341 -41184242 - AluSx SINE Alu -8 304 3 3387 229 101 79 chr2 212072341 212072450 -41184133 - L1ME1 LINE L1 -3824 2716 2611 1581 187 17 7 chr2 212072450 212072739 -41183844 - AluJb SINE Alu -20 292 1 3387 229 101 79 chr2 212072739 212073275 -41183308 - L1ME1 LINE L1 -3929 2611 2088 1899 145 7 3 chr2 212073275 212073558 -41183025 - AluSx SINE Alu -28 284 1 3387 229 101 79 chr2 212073558 212073961 -41182622 - L1ME1 LINE L1 -4452 2088 1695 2318 96 3 0 chr2 212073961 212074262 -41182321 - AluSx SINE Alu -10 302 1 1695 181 3 7 chr2 212074262 212074561 -41182022 - AluJo SINE Alu -8 304 7 2408 80 6 19 chr2 212074561 212074875 -41181708 - AluSg SINE Alu 0 310 1 3387 229 101 79 chr2 212074875 212075430 -41181153 - L1ME1 LINE L1 -4844 1696 854 234 321 80 56 chr2 212075923 212076247 -41180336 - L1ME1 LINE L1 -6197 343 12 310 265 225 25 chr2 212076358 212076558 -41180025 - MIR SINE MIR -15 247 8 2258 102 0 16 chr2 212076590 212076895 -41179688 + AluSx SINE Alu 1 300 -12 3690 123 49 62 chr2 212076903 212077076 -41179507 + L1MA6 LINE L1 5621 5795 -505 348 83 0 0 chr2 212077076 212077124 -41179459 + (TG)n Simple_repeat Simple_repeat 2 49 0 3690 123 49 62 chr2 212077124 212077517 -41179066 + L1MA6 LINE L1 5795 6179 -121 2364 91 0 10 chr2 212077517 212077824 -41178759 + AluSc SINE Alu 1 304 -5 3690 123 49 62 chr2 212077824 212077945 -41178638 + L1MA6 LINE L1 6179 6300 0 400 221 243 29 chr2 212078001 212078172 -41178411 - L1ME4a LINE L1 -201 5920 5705 2381 92 0 0 chr2 212078537 212078840 -41177743 - AluSq SINE Alu -10 303 1 534 284 34 0 chr2 212079397 212079573 -41177010 - MER96B DNA MER1_type? -6 411 230 227 238 0 0 chr2 212079677 212079719 -41176864 - MER96B DNA MER1_type? -365 52 11 1440 232 14 37 chr2 212079780 212080129 -41176454 - MLT1E2 LTR MaLR 0 626 286 862 162 20 0 chr2 212080131 212080279 -41176304 - AluSp/q SINE Alu -5 308 158 732 228 117 79 chr2 212080296 212080558 -41176025 - MLT1E2 LTR MaLR -322 332 55 2231 104 0 0 chr2 212080558 212080845 -41175738 - AluSx SINE Alu -13 299 13 732 228 117 79 chr2 212080845 212080898 -41175685 - MLT1E2 LTR MaLR -599 55 5 2062 89 82 0 chr2 212081621 212081901 -41174682 - AluY SINE Alu -8 303 1 2276 108 0 0 chr2 212082061 212082357 -41174226 - AluSx SINE Alu -16 296 1 315 167 0 0 chr2 212082397 212082463 -41174120 + (TG)n Simple_repeat Simple_repeat 1 66 0 696 196 62 0 chr2 212082899 212083011 -41173572 + FLAM_C SINE Alu 3 121 -22 222 113 38 19 chr2 212083011 212083064 -41173519 + (TA)n Simple_repeat Simple_repeat 1 54 0 409 144 50 0 chr2 212083081 212083241 -41173342 + (TA)n Simple_repeat Simple_repeat 2 169 0 1273 162 139 4 chr2 212083246 212083512 -41173071 + AluSx SINE Alu 9 310 -2 356 220 0 0 chr2 212083514 212083573 -41173010 + AluJ/FRAM SINE Alu 221 279 -23 306 0 0 0 chr2 212083577 212083611 -41172972 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 385 198 12 25 chr2 212085065 212085146 -41171437 - L2 LINE L2 -10 3262 3183 1759 137 53 17 chr2 212085236 212085536 -41171047 - AluSx SINE Alu -1 311 1 1019 247 136 27 chr2 212086137 212086505 -41170078 - LTR16C LTR ERVL 0 491 84 253 182 36 18 chr2 212086985 212087040 -41169543 - MLT1J2 LTR MaLR -327 123 68 2164 110 3 3 chr2 212087177 212087468 -41169115 - AluSx SINE Alu -20 292 2 1682 164 0 55 chr2 212087708 212088019 -41168564 + AluJb SINE Alu 1 294 -18 2310 93 0 0 chr2 212088412 212088702 -41167881 - AluSx SINE Alu -22 290 1 347 290 127 57 chr2 212088946 212089229 -41167354 + L2 LINE L2 2067 2369 -945 204 314 12 38 chr2 212089282 212089457 -41167126 - MIR SINE MIR -42 220 3 238 235 174 43 chr2 212089585 212089700 -41166883 + L2 LINE L2 2602 2731 -583 1750 164 33 10 chr2 212089907 212090206 -41166377 + AluJo SINE Alu 1 306 -6 1455 142 5 0 chr2 212090206 212090423 -41166160 + AluJb SINE Alu 87 305 -7 1581 224 59 100 chr2 212090530 212090657 -41165926 + MLT1F1 LTR MaLR 2 133 -434 2257 118 0 0 chr2 212090657 212090963 -41165620 + AluSx SINE Alu 1 306 -6 1581 224 59 100 chr2 212090963 212091330 -41165253 + MLT1F1 LTR MaLR 133 498 -69 2336 96 7 0 chr2 212091330 212091632 -41164951 - AluSq SINE Alu -9 304 1 1581 224 59 100 chr2 212091632 212091698 -41164885 + MLT1F1 LTR MaLR 498 565 -2 638 274 73 43 chr2 212091701 212092013 -41164570 + MLT1F1-int LTR MaLR 2 442 -929 2479 75 7 0 chr2 212092013 212092320 -41164263 - AluSc SINE Alu 0 309 1 638 274 73 43 chr2 212092320 212092395 -41164188 + MLT1F1-int LTR MaLR 442 513 -858 397 293 88 50 chr2 212092521 212092760 -41163823 + MIR SINE MIR 9 256 -6 197 305 84 0 chr2 212092774 212092869 -41163714 + MIR SINE MIR 151 253 -9 4526 100 41 34 chr2 212093063 212093518 -41163065 - LTR9B LTR ERV1 0 644 182 2158 103 10 3 chr2 212093518 212093810 -41162773 - AluSp SINE Alu -17 296 3 4526 100 41 34 chr2 212093810 212093994 -41162589 - LTR9B LTR ERV1 -462 182 1 3249 276 91 41 chr2 212094034 212095230 -41161353 + L1ME1 LINE L1 35 1370 -5026 1344 26 7 0 chr2 212095230 212095382 -41161201 + L1PA4 LINE L1 5999 6151 -4 3249 276 91 41 chr2 212095382 212096154 -41160429 + L1ME1 LINE L1 1370 2102 -4294 697 261 103 26 chr2 212096203 212096702 -41159881 + L1ME1 LINE L1 2172 2730 -3485 1498 215 128 93 chr2 212096710 212097464 -41159119 + LTR1B LTR ERV1 1 983 -37 3603 229 91 9 chr2 212097543 212098000 -41158583 + L1ME1 LINE L1 2738 3156 -3059 2285 105 0 10 chr2 212098000 212098314 -41158269 + AluSx SINE Alu 1 311 -1 3603 229 91 9 chr2 212098314 212098826 -41157757 + L1ME1 LINE L1 3156 3810 -2405 2070 139 0 0 chr2 212098826 212099121 -41157462 - AluJb SINE Alu -17 295 1 3603 229 91 9 chr2 212099121 212099247 -41157336 + L1ME1 LINE L1 3810 3924 -2291 3018 208 48 19 chr2 212099247 212099876 -41156707 - MER82 DNA MER2_type 0 653 7 2182 109 7 7 chr2 212099945 212100239 -41156344 - AluSx SINE Alu -18 294 1 1969 234 84 26 chr2 212100240 212101484 -41155099 + L1ME1 LINE L1 3964 5828 -405 1892 138 24 3 chr2 212101484 212101773 -41154810 + AluSx SINE Alu 1 295 -17 1969 234 84 26 chr2 212101773 212101801 -41154782 + L1ME1 LINE L1 5828 5853 -380 1084 156 0 73 chr2 212101803 212102021 -41154562 - MLT2B1 LTR ERVL 0 520 319 1204 240 55 25 chr2 212102037 212102370 -41154213 + L1ME1 LINE L1 5848 6194 -41 1629 203 0 3 chr2 212102370 212102665 -41153918 - AluJo SINE Alu -18 294 1 1204 240 55 25 chr2 212102665 212102698 -41153885 + L1ME1 LINE L1 6194 6225 -10 21 57 0 0 chr2 212103019 212103054 -41153529 + AT_rich Low_complexity Low_complexity 1 35 0 240 281 34 11 chr2 212103097 212103186 -41153397 - L1ME LINE L1 -423 5698 5608 483 194 216 13 chr2 212103343 212103570 -41153013 - HAL1b LINE L1 -164 1184 912 1894 147 0 7 chr2 212104115 212104407 -41152176 + AluJb SINE Alu 3 292 -20 1655 160 0 75 chr2 212104590 212104909 -41151674 + AluJb SINE Alu 1 295 -17 299 357 152 5 chr2 212105487 212105711 -41150872 - L2 LINE L2 -212 3060 2804 195 317 19 48 chr2 212105757 212105861 -41150722 + L2 LINE L2 2423 2523 -791 2005 124 0 23 chr2 212106087 212106386 -41150197 + AluSx SINE Alu 1 292 -20 22 0 0 0 chr2 212106446 212106468 -41150115 + AT_rich Low_complexity Low_complexity 1 22 0 450 0 0 0 chr2 212106604 212106654 -41149929 + (TG)n Simple_repeat Simple_repeat 1 50 0 26 50 0 0 chr2 212107172 212107212 -41149371 + AT_rich Low_complexity Low_complexity 1 40 0 1805 157 54 3 chr2 212107329 212107679 -41148904 - Cheshire DNA MER1_type 0 2420 2053 1464 231 36 21 chr2 212107692 212108026 -41148557 - Cheshire DNA MER1_type -2079 341 3 2036 118 45 0 chr2 212108281 212108569 -41148014 + AluSx SINE Alu 1 301 -11 233 276 65 56 chr2 212108593 212108807 -41147776 - L1ME4a LINE L1 -188 5933 5718 2365 88 3 0 chr2 212109140 212109445 -41147138 - AluSx SINE Alu -6 306 1 212 286 0 0 chr2 212110058 212110107 -41146476 - MER5A DNA MER1_type -57 132 84 436 209 0 0 chr2 212110107 212110193 -41146390 - L1MD1 LINE L1 -350 5892 5807 2906 180 36 9 chr2 212110201 212110735 -41145848 + MER44D DNA MER2_type 1 603 -2 415 304 29 47 chr2 212111070 212111241 -41145342 - MER5A DNA MER1_type -10 179 12 1541 84 89 9 chr2 212111276 212111489 -41145094 + MER30 DNA MER1_type 1 230 0 259 200 0 133 chr2 212111712 212111738 -41144845 - MIR3 SINE MIR -29 179 151 1907 160 0 10 chr2 212111738 212112051 -41144532 + AluJb SINE Alu 1 310 -2 259 200 0 133 chr2 212112051 212112099 -41144484 - MIR3 SINE MIR -57 151 115 453 314 16 43 chr2 212112148 212112336 -41144247 + L2 LINE L2 3131 3313 0 2229 118 3 13 chr2 212112489 212112804 -41143779 - AluSx SINE Alu 0 312 1 1859 144 23 16 chr2 212112814 212113119 -41143464 - AluSx SINE Alu -5 307 1 2298 117 0 0 chr2 212113378 212113677 -41142906 - AluSx SINE Alu -13 299 1 462 243 171 33 chr2 212114631 212114841 -41141742 + HAL1 LINE L1 1658 1896 -611 2233 120 3 0 chr2 212114962 212115270 -41141313 + AluSx SINE Alu 1 309 -3 400 245 49 86 chr2 212115402 212115577 -41141006 + L1MC4a LINE L1 5744 5911 -210 2470 73 13 0 chr2 212115577 212115880 -41140703 - AluSp SINE Alu -6 307 1 400 245 49 86 chr2 212115880 212115949 -41140634 + L1MC4a LINE L1 5911 5981 -140 21 0 0 0 chr2 212115976 212115997 -41140586 + AT_rich Low_complexity Low_complexity 1 21 0 1802 163 3 0 chr2 212116276 212116570 -41140013 - AluJo SINE Alu -17 295 1 45 39 0 13 chr2 212116576 212116631 -41139952 + AT_rich Low_complexity Low_complexity 1 56 -20 2190 123 0 19 chr2 212116631 212116949 -41139634 - AluSx SINE Alu 0 312 1 45 39 0 13 chr2 212116949 212116970 -41139613 + AT_rich Low_complexity Low_complexity 56 76 0 2349 101 0 0 chr2 212117010 212117318 -41139265 - AluSc SINE Alu -1 308 1 2510 77 3 0 chr2 212117439 212117749 -41138834 - AluY SINE Alu 0 311 1 251 154 0 0 chr2 212117758 212117797 -41138786 - tRNA-Ile-ATT tRNA tRNA -38 39 1 347 225 47 23 chr2 212118110 212118239 -41138344 - L1MC5 LINE L1 -58 7903 7772 1992 110 32 4 chr2 212118312 212118593 -41137990 + AluSp SINE Alu 1 289 -24 261 0 0 0 chr2 212118596 212118625 -41137958 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 226 320 0 0 chr2 212118625 212118725 -41137858 + Charlie1 DNA MER1_type 2337 2436 -325 2618 64 3 0 chr2 212119016 212119328 -41137255 + AluSp SINE Alu 1 313 0 1988 142 3 7 chr2 212119383 212119672 -41136911 - AluSx SINE Alu -24 288 1 895 161 0 0 chr2 212119881 212120011 -41136572 - FLAM_A SINE Alu -2 131 2 2114 130 0 32 chr2 212120200 212120516 -41136067 + AluJb SINE Alu 1 306 -6 184 254 146 0 chr2 212120573 212120628 -41135955 + MIR SINE MIR 86 148 -114 297 0 0 0 chr2 212120746 212120779 -41135804 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 363 261 34 0 chr2 212120808 212120896 -41135687 - L2 LINE L2 0 3272 3182 207 293 35 0 chr2 212120913 212120971 -41135612 - L2 LINE L2 -20 3252 3193 472 313 151 47 chr2 212120971 212121074 -41135509 + L2 LINE L2 2175 2266 -1048 2260 121 0 0 chr2 212121074 212121381 -41135202 - AluSx SINE Alu -5 307 1 1856 126 15 4 chr2 212121383 212121654 -41134929 - AluSx SINE Alu -16 296 23 472 313 151 47 chr2 212121654 212122017 -41134566 + L2 LINE L2 2266 2693 -621 664 307 127 41 chr2 212122570 212122773 -41133810 + L2 LINE L2 2762 2946 -367 2184 98 0 14 chr2 212122773 212123097 -41133486 - AluSg SINE Alu 0 320 1 664 307 127 41 chr2 212123097 212123406 -41133177 + L2 LINE L2 2946 3313 0 561 339 101 29 chr2 212123571 212124422 -41132161 - L2 LINE L2 -274 2998 2020 1080 166 0 0 chr2 212124560 212124723 -41131860 - AluJo SINE Alu -16 296 134 228 182 0 0 chr2 212124726 212124770 -41131813 + (TATATG)n Simple_repeat Simple_repeat 4 47 0 2104 138 0 7 chr2 212124773 212125069 -41131514 - AluSx SINE Alu -18 294 1 943 162 0 0 chr2 212125069 212125205 -41131378 - AluJo SINE Alu -175 137 2 1843 164 0 0 chr2 212125205 212125486 -41131097 - AluJb SINE Alu -11 301 21 23 33 0 0 chr2 212126207 212126237 -41130346 + AT_rich Low_complexity Low_complexity 1 30 0 1723 138 69 0 chr2 212126237 212126513 -41130070 - AluJb SINE Alu -17 295 1 218 200 0 0 chr2 212126964 212127009 -41129574 - L2 LINE L2 -4 3309 3265 1773 112 20 4 chr2 212127051 212127302 -41129281 - AluSx SINE Alu -34 278 24 321 235 160 25 chr2 212127644 212127763 -41128820 - MIR SINE MIR -75 187 53 2273 97 3 13 chr2 212127778 212128088 -41128495 - AluSq SINE Alu -6 307 1 3999 172 59 40 chr2 212128112 212128617 -41127966 - L1MB1 LINE L1 -28 6140 5646 1532 186 16 23 chr2 212128617 212128924 -41127659 - AluJo SINE Alu -7 305 1 3999 172 59 40 chr2 212128924 212129224 -41127359 - L1MB1 LINE L1 -522 5646 5353 2197 115 3 0 chr2 212129224 212129520 -41127063 - AluSq SINE Alu -16 297 1 3999 172 59 40 chr2 212129520 212130426 -41126157 - L1MB1 LINE L1 -815 5353 4360 * 14155 156 27 16 chr2 212130421 212133735 -41122848 - L1MA3 LINE L1 0 7724 4449 2208 128 0 0 chr2 212133735 212134025 -41122558 - AluSx SINE Alu -22 290 1 14155 156 27 16 chr2 212134025 212134549 -41122034 - L1MA3 LINE L1 -3275 4449 3932 10434 29 1 137 chr2 212134549 212136095 -41120488 - SVA Other Other 0 1386 52 180 0 0 0 chr2 212136095 212136115 -41120468 + (GGGAGA)n Simple_repeat Simple_repeat 1 20 0 14155 156 27 16 chr2 212136115 212136599 -41119984 - L1MA3 LINE L1 -3791 3933 3363 8075 155 39 4 chr2 212136600 212137205 -41119378 - L1MA3 LINE L1 -4989 2576 1993 1593 184 14 17 chr2 212137205 212137499 -41119084 + AluJb SINE Alu 1 293 -19 8075 155 39 4 chr2 212137499 212138323 -41118260 - L1MA3 LINE L1 -5572 1993 1098 1177 196 46 32 chr2 212138321 212138668 -41117915 - L1MB1 LINE L1 -2088 4058 3707 * 1773 220 136 24 chr2 212139398 212140230 -41116353 - L1MD3 LINE L1 0 8042 7126 243 0 0 0 chr2 212140419 212140446 -41116137 + (TG)n Simple_repeat Simple_repeat 1 27 0 306 241 71 0 chr2 212140472 212140613 -41115970 - L1MC5 LINE L1 -202 7759 7609 301 310 54 0 chr2 212140823 212140952 -41115631 - L1MC4a LINE L1 -577 7231 7096 311 207 47 127 chr2 212141537 212141661 -41114922 - MIR SINE MIR 0 262 150 1732 167 3 30 chr2 212141661 212141960 -41114623 - AluJb SINE Alu -21 291 1 311 207 47 127 chr2 212141960 212141985 -41114598 - MIR SINE MIR -112 150 125 2152 95 27 3 chr2 212142026 212142320 -41114263 - AluSg SINE Alu -9 301 1 3173 94 21 8 chr2 212142390 212142860 -41113723 + L1PA13 LINE L1 5688 6163 0 950 267 54 31 chr2 212143520 212143910 -41112673 - L1MC4a LINE L1 -1889 5919 5521 297 225 11 11 chr2 212143930 212144019 -41112564 - L1MC4a LINE L1 -2368 5440 5352 2272 82 45 0 chr2 212144070 212144361 -41112222 - AluSg SINE Alu -6 304 1 256 261 115 25 chr2 212144414 212144572 -41112011 + MIR SINE MIR 6 262 0 24 53 0 0 chr2 212144690 212144728 -41111855 + AT_rich Low_complexity Low_complexity 1 38 0 2050 133 0 31 chr2 212145315 212145637 -41110946 - AluSx SINE Alu 0 312 1 318 240 53 0 chr2 212146696 212146771 -41109812 + MIR SINE MIR 87 165 -97 1344 90 0 25 chr2 212146771 212146971 -41109612 + L1PA6 LINE L1 5960 6154 0 557 230 8 8 chr2 212147299 212147425 -41109158 + MER58A DNA MER1_type 3 128 0 1186 199 34 46 chr2 212147432 212147759 -41108824 - MER2 DNA MER2_type 0 345 23 478 202 0 0 chr2 212147762 212147851 -41108732 + MER58A DNA MER1_type 135 223 -1 1628 179 13 46 chr2 212148000 212148307 -41108276 - AluJb SINE Alu -15 297 1 22 0 0 0 chr2 212148848 212148870 -41107713 + AT_rich Low_complexity Low_complexity 1 22 0 2278 89 13 10 chr2 212149074 212149377 -41107206 + AluSx SINE Alu 1 304 -8 198 345 82 75 chr2 212149483 212149764 -41106819 - L2 LINE L2 0 3272 2990 293 343 118 44 chr2 212149785 212150106 -41106477 - L2 LINE L2 -457 2857 2513 589 279 107 20 chr2 212150128 212150325 -41106258 - MIR SINE MIR -42 220 7 1860 146 19 7 chr2 212150406 212150714 -41105869 + AluSx SINE Alu 1 312 0 1266 187 40 3 chr2 212150742 212151063 -41105520 + L1M4 LINE L1 4962 5294 -852 1135 168 42 7 chr2 212151067 212151351 -41105232 + L1MB8 LINE L1 5231 5523 -655 324 0 0 0 chr2 212151351 212151387 -41105196 + (TA)n Simple_repeat Simple_repeat 2 37 0 1898 139 0 4 chr2 212151430 212151748 -41104835 - AluSg SINE Alu 0 317 1 2136 136 3 0 chr2 212151751 212152053 -41104530 - AluSq SINE Alu -10 303 1 1043 90 0 0 chr2 212152076 212152209 -41104374 - AluSq/x SINE Alu -179 133 1 2098 178 71 0 chr2 212152209 212152555 -41104028 + L1MB8 LINE L1 5521 5904 -280 1970 139 0 34 chr2 212152555 212152839 -41103744 + AluSx SINE Alu 1 274 -38 321 26 0 0 chr2 212152839 212152877 -41103706 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 1970 139 0 34 chr2 212152877 212152915 -41103668 + AluSx SINE Alu 274 312 0 2098 178 71 0 chr2 212152915 212152990 -41103593 + L1MB8 LINE L1 5904 5972 -212 4246 73 25 27 chr2 212152990 212154118 -41102465 - MER11A LTR ERVK 0 1266 1 451 181 56 142 chr2 212154118 212154260 -41102323 + L1MB8 LINE L1 5967 6083 -95 815 141 8 0 chr2 212154260 212154381 -41102202 + FLAM_A SINE Alu 1 122 -11 451 181 56 142 chr2 212154381 212154470 -41102113 + L1MB8 LINE L1 6083 6178 0 328 300 216 11 chr2 212154582 212154772 -41101811 + MIR SINE MIR 18 246 -16 25 0 0 0 chr2 212155771 212155796 -41100787 + AT_rich Low_complexity Low_complexity 1 25 0 1192 41 0 0 chr2 212155807 212155953 -41100630 - L1PA4 LINE L1 -5 6150 6005 1731 147 0 25 chr2 212156492 212156777 -41099806 + AluJb SINE Alu 1 278 -34 969 223 113 42 chr2 212157363 212157626 -41098957 - L1MD2 LINE L1 -237 6122 5826 2211 119 0 0 chr2 212157626 212157920 -41098663 - AluSx SINE Alu -18 294 1 969 223 113 42 chr2 212157920 212158011 -41098572 - L1MD2 LINE L1 -533 5826 5743 767 209 93 13 chr2 212157999 212158329 -41098254 - L1MD2 LINE L1 -717 5449 5091 * 557 264 56 28 chr2 212158701 212158879 -41097704 + MIR SINE MIR 77 259 -3 2044 156 0 3 chr2 212158925 212159227 -41097356 + AluSx SINE Alu 1 301 -11 270 95 0 0 chr2 212159398 212159408 -41097175 + (TCTG)n Simple_repeat Simple_repeat 1 52 0 270 95 0 0 chr2 212159408 212159450 -41097133 + (TCTG)n Simple_repeat Simple_repeat 3 44 0 1473 179 25 15 chr2 212159504 212159778 -41096805 - AluJo SINE Alu -35 277 1 1399 94 0 11 chr2 212159908 212160088 -41096495 + AluY SINE Alu 1 178 -133 941 139 0 62 chr2 212160216 212160424 -41096159 - AluSq SINE Alu -118 195 1 2522 87 0 0 chr2 212160848 212161158 -41095425 + AluSx SINE Alu 3 312 0 1242 175 89 66 chr2 212161390 212161442 -41095141 - L1MB4 LINE L1 -6 6174 6125 14790 122 21 20 chr2 212161442 212162387 -41094196 + Tigger1 DNA MER2_type 1 944 -1474 1698 172 6 48 chr2 212162387 212162701 -41093882 - AluJo SINE Alu -11 301 1 14790 122 21 20 chr2 212162701 212163815 -41092768 + Tigger1 DNA MER2_type 944 2056 -362 2188 128 0 0 chr2 212163815 212164120 -41092463 + AluSg SINE Alu 4 308 -2 14790 122 21 20 chr2 212164120 212164264 -41092319 + Tigger1 DNA MER2_type 2056 2198 -220 2445 69 0 0 chr2 212164264 212164554 -41092029 - AluY SINE Alu -21 290 1 14790 122 21 20 chr2 212164554 212164764 -41091819 + Tigger1 DNA MER2_type 2198 2418 0 1242 175 89 66 chr2 212164764 212165060 -41091523 - L1MB4 LINE L1 -55 6125 5818 1354 195 11 15 chr2 212165083 212165355 -41091228 - AluJo SINE Alu -41 271 1 1882 185 68 18 chr2 212165355 212165810 -41090773 - L1MB4 LINE L1 -348 5826 5349 693 218 20 0 chr2 212165822 212165969 -41090614 + MIR SINE MIR 103 252 -10 264 258 174 0 chr2 212166018 212166150 -41090433 + MER117 DNA MER1_type 1 155 -42 1865 126 38 38 chr2 212166311 212166604 -41089979 - AluSq SINE Alu -20 293 1 2406 95 3 0 chr2 212166726 212167030 -41089553 + AluSp SINE Alu 1 305 -8 1024 174 0 22 chr2 212167704 212167882 -41088701 - FAM SINE Alu -4 45 1 1646 173 27 27 chr2 212168750 212169051 -41087532 - AluJb SINE Alu -11 301 1 347 296 43 43 chr2 212169249 212169526 -41087057 - L1M4 LINE L1 -1989 4157 3881 1065 173 0 0 chr2 212169978 212170151 -41086432 - AluY SINE Alu -9 302 130 1292 214 0 18 chr2 212170156 212170431 -41086152 - AluY SINE Alu -3 308 39 863 55 27 0 chr2 212170532 212170642 -41085941 - AluY SINE Alu -198 113 1 908 284 83 34 chr2 212170686 212171610 -41084973 + L1ME4a LINE L1 4317 5286 -860 11094 179 72 35 chr2 212171626 212172962 -41083621 + L1M1 LINE L1 1266 2552 -4810 1992 161 107 5 chr2 212172962 212173354 -41083229 - MSTB1 LTR MaLR 0 432 1 11094 179 72 35 chr2 212173354 212173500 -41083083 + L1M1 LINE L1 2552 2691 -4671 2324 104 0 13 chr2 212173500 212173809 -41082774 + AluSx SINE Alu 1 305 -7 2074 146 0 0 chr2 212173809 212174103 -41082480 + AluSg SINE Alu 1 294 -16 11094 179 72 35 chr2 212174103 212177743 -41078840 + L1M1 LINE L1 2690 6844 -518 449 265 94 56 chr2 212177954 212178433 -41078150 + L1ME4a LINE L1 5576 6072 -49 798 144 0 8 chr2 212178457 212178575 -41078008 + FLAM_C SINE Alu 3 119 -14 31 0 0 0 chr2 212178575 212178606 -41077977 + AT_rich Low_complexity Low_complexity 1 31 0 921 205 50 94 chr2 212178754 212179042 -41077541 - MLT1A2 LTR MaLR 0 374 106 1929 159 0 7 chr2 212179042 212179344 -41077239 + AluJb SINE Alu 5 304 -8 921 205 50 94 chr2 212179344 212179436 -41077147 - MLT1A2 LTR MaLR -268 106 11 239 311 54 0 chr2 212179456 212179530 -41077053 - L2 LINE L2 -27 3245 3168 2146 110 3 13 chr2 212180296 212180604 -41075979 + AluSx SINE Alu 1 305 -7 25 0 0 0 chr2 212180675 212180700 -41075883 + AT_rich Low_complexity Low_complexity 1 25 0 6379 69 10 20 chr2 212181727 212183316 -41073267 + L1PA8A LINE L1 4541 6124 -7 1778 113 79 25 chr2 212183355 212183416 -41073167 - MSTA LTR MaLR -3 425 369 2236 110 3 10 chr2 212183416 212183717 -41072866 + AluSg SINE Alu 1 299 -11 1778 113 79 25 chr2 212183717 212183973 -41072610 - MSTA LTR MaLR -59 369 91 1833 96 0 8 chr2 212184944 212185184 -41071399 + AluSx SINE Alu 1 238 -74 200 229 83 0 chr2 212185771 212185819 -41070764 - L2 LINE L2 0 3272 3221 24 53 0 0 chr2 212187395 212187433 -41069150 + AT_rich Low_complexity Low_complexity 1 38 0 1580 180 3 46 chr2 212188212 212188372 -41068211 - AluJo SINE Alu -20 292 150 2405 90 0 0 chr2 212188372 212188671 -41067912 - AluY SINE Alu -12 299 1 1580 180 3 46 chr2 212188671 212188815 -41067768 - AluJo SINE Alu -162 150 1 308 293 36 7 chr2 212188906 212189046 -41067537 - L1MC4 LINE L1 -210 7832 7689 2413 186 149 0 chr2 212189108 212189645 -41066938 - L1M3f LINE L1 -4706 622 6 1601 161 44 7 chr2 212189738 212190011 -41066572 - AluJb SINE Alu -29 283 1 2258 125 3 3 chr2 212190329 212190641 -41065942 - AluSq SINE Alu -1 312 1 2490 73 0 3 chr2 212191885 212192186 -41064397 - AluY SINE Alu -11 300 1 620 174 43 29 chr2 212192817 212192955 -41063628 - Charlie4 DNA MER1_type -2 1959 1820 1600 191 0 17 chr2 212193096 212193384 -41063199 - AluJb SINE Alu -29 283 1 23 0 0 0 chr2 212194194 212194217 -41062366 + AT_rich Low_complexity Low_complexity 1 23 0 414 0 0 0 chr2 212194876 212194922 -41061661 + (CA)n Simple_repeat Simple_repeat 2 47 0 2327 97 3 0 chr2 212195972 212196270 -41060313 - AluSq SINE Alu -10 303 5 40 0 0 0 chr2 212197579 212197619 -41058964 + AT_rich Low_complexity Low_complexity 1 40 0 1590 138 0 79 chr2 212199123 212199413 -41057170 - AluJo SINE Alu -15 297 31 1224 150 0 97 chr2 212199414 212199640 -41056943 - AluJo SINE Alu -108 204 1 405 245 174 5 chr2 212199980 212200192 -41056391 - MER112 DNA MER1_type -4 256 9 209 321 75 22 chr2 212200551 212200685 -41055898 + MIR3 SINE MIR 7 147 -61 488 259 100 29 chr2 212200919 212201089 -41055494 - MIR SINE MIR -53 209 28 1915 98 8 0 chr2 212201474 212201738 -41054845 - AluSq SINE Alu -47 266 1 264 197 53 40 chr2 212201837 212201913 -41054670 + L1ME4a LINE L1 5973 6049 -72 24 0 0 0 chr2 212201951 212201975 -41054608 + AT_rich Low_complexity Low_complexity 1 24 0 1248 160 175 12 chr2 212203345 212203677 -41052906 + MER88 LTR ERVL 79 464 0 2143 111 7 0 chr2 212204343 212204632 -41051951 - AluSx SINE Alu -21 291 1 2333 104 7 0 chr2 212205859 212206167 -41050416 - AluSx SINE Alu -2 310 1 2574 56 0 0 chr2 212206691 212206994 -41049589 - AluY SINE Alu -8 303 1 775 148 0 30 chr2 212208622 212208757 -41047826 - FLAM_C SINE Alu 0 133 3 357 277 21 0 chr2 212209624 212209718 -41046865 + MIR SINE MIR 48 143 -119 2271 103 0 3 chr2 212210105 212210405 -41046178 + AluSx SINE Alu 1 299 -13 925 229 41 17 chr2 212210545 212210838 -41045745 - L1ME LINE L1 -475 5687 5388 2111 128 7 3 chr2 212210878 212211183 -41045400 + AluSx SINE Alu 1 306 -6 441 362 54 51 chr2 212211382 212211755 -41044828 + L1PBb LINE L1 229 602 -6247 430 339 61 17 chr2 212211900 212212195 -41044388 + L1PBb LINE L1 698 1005 -5844 758 276 33 53 chr2 212212359 212212788 -41043795 + L1PBb LINE L1 1047 1564 -5284 * 1840 211 13 55 chr2 212212772 212213619 -41042964 + L1PBb LINE L1 1335 2245 -4603 1220 154 0 0 chr2 212213622 212213797 -41042786 - AluSg/x SINE Alu -10 300 126 1731 120 7 68 chr2 212213799 212214108 -41042475 - AluSg SINE Alu -20 290 1 1250 205 212 51 chr2 212214113 212214913 -41041670 - SATR1 Satellite Satellite -144 2843 2174 2102 82 18 14 chr2 212214913 212215194 -41041389 + AluY SINE Alu 28 309 -2 1250 205 212 51 chr2 212215194 212216561 -41040022 - SATR1 Satellite Satellite -813 2174 1 447 136 0 0 chr2 212216566 212216632 -41039951 - AluS SINE Alu -247 66 1 10624 201 25 82 chr2 212216632 212217308 -41039275 + L1PBb LINE L1 2241 2954 -3894 2167 140 0 7 chr2 212217308 212217616 -41038967 + AluSx SINE Alu 1 306 -6 10624 201 25 82 chr2 212217616 212217665 -41038918 + L1PBb LINE L1 2954 3004 -3844 2470 66 0 0 chr2 212217665 212217969 -41038614 + AluY SINE Alu 1 304 -7 10624 201 25 82 chr2 212217969 212218655 -41037928 + L1PBb LINE L1 3004 3727 -3121 1694 204 0 31 chr2 212218655 212218830 -41037753 - AluJo SINE Alu -4 308 146 2414 97 0 0 chr2 212218830 212219128 -41037455 - AluSg SINE Alu -12 298 1 1694 204 0 31 chr2 212219128 212219270 -41037313 - AluJo SINE Alu -166 146 1 10624 201 25 82 chr2 212219270 212219498 -41037085 + L1PBb LINE L1 3727 3966 -2882 2499 86 0 0 chr2 212219498 212219811 -41036772 + AluSq SINE Alu 1 313 0 10624 201 25 82 chr2 212219811 212219890 -41036693 + L1PBb LINE L1 3966 4048 -2800 2001 143 3 0 chr2 212219890 212220176 -41036407 + AluJb SINE Alu 1 287 -25 10624 201 25 82 chr2 212220176 212220857 -41035726 + L1PBb LINE L1 4048 4766 -2082 2101 100 4 0 chr2 212220857 212221138 -41035445 - AluSx SINE Alu -30 282 1 10624 201 25 82 chr2 212221138 212222465 -41034118 + L1PBb LINE L1 4766 5766 -1082 243 0 0 0 chr2 212222465 212222492 -41034091 + (T)n Simple_repeat Simple_repeat 1 27 0 33 0 0 0 chr2 212222516 212222549 -41034034 + AT_rich Low_complexity Low_complexity 1 33 0 4474 42 0 4 chr2 212222549 212223055 -41033528 - SVA Other Other 0 1386 883 451 201 15 45 chr2 212223057 212223191 -41033392 + L1 LINE L1 5759 5888 -960 862 161 7 14 chr2 212223192 212223335 -41033248 + AluJo SINE Alu 1 142 -170 1773 136 19 36 chr2 212223621 212223930 -41032653 - AluSx SINE Alu -8 304 1 2711 3 0 10 chr2 212224469 212224770 -41031813 + AluYb8 SINE Alu 1 298 -20 344 257 34 47 chr2 212224858 212225006 -41031577 + L1ME LINE L1 5594 5739 -382 242 279 59 0 chr2 212225142 212225210 -41031373 - MIR3 SINE MIR -22 186 115 275 287 36 31 chr2 212225336 212225446 -41031137 + MIR SINE MIR 37 148 -63 247 308 56 56 chr2 212226378 212226576 -41030007 - L2 LINE L2 -629 2685 2488 338 334 120 25 chr2 212227471 212227839 -41028744 + L1M4 LINE L1 2409 2811 -3335 1384 118 81 4 chr2 212227981 212228398 -41028185 + LTR54 LTR ERV1 1 510 0 3405 259 55 19 chr2 212228471 212229465 -41027118 + L1ME1 LINE L1 30 1059 -5800 2953 210 67 23 chr2 212229468 212229769 -41026814 + L1ME1 LINE L1 5934 6220 -757 2109 119 7 3 chr2 212229769 212230063 -41026520 + AluSq SINE Alu 1 295 -18 2953 210 67 23 chr2 212230063 212230092 -41026491 + L1ME1 LINE L1 6220 6246 -731 2234 125 0 0 chr2 212230092 212230388 -41026195 + AluSx SINE Alu 3 298 -14 2953 210 67 23 chr2 212230388 212230727 -41025856 + L1ME1 LINE L1 6246 6569 -408 2144 97 7 13 chr2 212230727 212231025 -41025558 + AluY SINE Alu 1 296 -15 2953 210 67 23 chr2 212231025 212231354 -41025229 + L1ME1 LINE L1 6569 6970 -7 1837 127 0 74 chr2 212231577 212231900 -41024683 + AluSx SINE Alu 1 299 -13 2201 108 10 0 chr2 212231909 212232206 -41024377 + AluSq SINE Alu 1 300 -13 234 324 7 7 chr2 212232249 212232397 -41024186 + L1M4 LINE L1 3791 3938 -2208 1313 106 0 0 chr2 212232400 212232570 -41024013 + AluSg/x SINE Alu 133 302 -10 515 304 184 11 chr2 212232570 212233103 -41023480 + L1M4 LINE L1 3933 4557 -1589 216 97 0 0 chr2 212233268 212233299 -41023284 + (T)n Simple_repeat Simple_repeat 1 31 0 542 146 11 0 chr2 212233299 212233388 -41023195 - AluSc SINE Alu -114 195 106 1540 123 5 0 chr2 212233508 212233719 -41022864 + AluSp SINE Alu 90 301 -12 1710 130 20 4 chr2 212233908 212234155 -41022428 + AluSx SINE Alu 46 296 -16 490 245 34 54 chr2 212234185 212234483 -41022100 + L1M4 LINE L1 4942 5233 -913 246 215 37 20 chr2 212234514 212234582 -41022001 - MIR3 SINE MIR -28 180 123 317 205 175 53 chr2 212234696 212234867 -41021716 - L2 LINE L2 0 3313 3122 25 31 0 0 chr2 212235197 212235229 -41021354 + AT_rich Low_complexity Low_complexity 1 32 0 291 54 0 0 chr2 212235235 212235272 -41021311 + (TG)n Simple_repeat Simple_repeat 2 38 0 2567 146 76 11 chr2 212235500 212235637 -41020946 - L1MA8 LINE L1 -7 6284 6157 2194 118 0 0 chr2 212235637 212235924 -41020659 - AluSx SINE Alu -25 287 1 2567 146 76 11 chr2 212235924 212236326 -41020257 - L1MA8 LINE L1 -134 6157 5710 1778 169 0 43 chr2 212236339 212236641 -41019942 - AluJo SINE Alu -21 291 3 4794 148 27 8 chr2 212236661 212237940 -41018643 - L1MA4A LINE L1 -20 6280 4930 2186 109 0 17 chr2 212237981 212238283 -41018300 - AluSc SINE Alu -12 297 1 787 276 116 29 chr2 212239940 212240519 -41016064 + L1MEd LINE L1 814 1442 -4930 320 374 49 6 chr2 212240542 212240705 -41015878 + L1MEd LINE L1 1314 1483 -4901 302 221 29 93 chr2 212241113 212241228 -41015355 + L1MEd LINE L1 2390 2488 -3894 1988 145 23 0 chr2 212241228 212241531 -41015052 + AluSx SINE Alu 1 310 -2 302 221 29 93 chr2 212241531 212241619 -41014964 + L1MEd LINE L1 2488 2580 -3802 3674 125 5 8 chr2 212242162 212242756 -41013827 + HERV30 LTR ERV1 5094 5685 -2572 2122 79 10 3 chr2 212242756 212243061 -41013522 - AluYb8 SINE Alu -11 307 1 1593 155 29 4 chr2 212243417 212243694 -41012889 - AluJb SINE Alu -28 284 1 273 250 12 0 chr2 212243708 212243788 -41012795 + L1MEd LINE L1 2616 2696 -3686 3571 100 62 21 chr2 212243789 212244368 -41012215 + LTR10E LTR ERV1 1 603 -30 575 261 86 41 chr2 212244385 212244871 -41011712 + L1MEd LINE L1 2702 3209 -3173 * 1327 226 64 8 chr2 212244859 212245249 -41011334 + L1MB7 LINE L1 5772 6183 -1 189 0 0 0 chr2 212245299 212245320 -41011263 + (GAAA)n Simple_repeat Simple_repeat 2 22 0 652 159 9 0 chr2 212245321 212245428 -41011155 + FLAM_C SINE Alu 1 108 -35 351 231 129 12 chr2 212245440 212245695 -41010888 + L1MEd LINE L1 3309 3593 -2789 358 138 0 0 chr2 212245913 212245971 -41010612 + AluJb SINE Alu 1 58 -244 1843 136 14 3 chr2 212245977 212246271 -41010312 + L1M1 LINE L1 605 901 -6664 1607 149 0 19 chr2 212246283 212246545 -41010038 + AluJb SINE Alu 55 311 -1 221 246 200 9 chr2 212246563 212246673 -41009910 - MIR SINE MIR -13 249 119 15621 128 45 59 chr2 212246903 212249234 -41007349 + L1M1 LINE L1 16 2376 -5189 2083 125 7 7 chr2 212249234 212249530 -41007053 + AluSp SINE Alu 1 296 -17 838 168 155 0 chr2 212249530 212249685 -41006898 + AluSg/x SINE Alu 134 312 0 15621 128 45 59 chr2 212249685 212250128 -41006455 + L1M1 LINE L1 2374 2906 -4659 6881 90 27 15 chr2 212250128 212251173 -41005410 + MER11C LTR ERVK 1 1057 -14 2268 81 7 26 chr2 212251239 212251546 -41005037 + AluY SINE Alu 1 301 -10 275 295 0 0 chr2 212251849 212251910 -41004673 - L2 LINE L2 -2 3270 3210 2376 97 0 0 chr2 212252163 212252462 -41004121 + AluSg SINE Alu 1 299 -11 2112 114 7 13 chr2 212252843 212253142 -41003441 + AluSx SINE Alu 1 297 -15 1492 109 35 0 chr2 212253283 212253512 -41003071 - MSTB2 LTR MaLR 0 457 221 2457 123 45 14 chr2 212254013 212254434 -41002149 + MSTB2 LTR MaLR 24 457 0 22 0 0 0 chr2 212255465 212255487 -41001096 + AT_rich Low_complexity Low_complexity 1 22 0 202 185 37 0 chr2 212255487 212255541 -41001042 + T-rich Low_complexity Low_complexity 3 58 0 206 200 0 22 chr2 212256855 212256900 -40999683 + MIR SINE MIR 101 144 -64 520 248 198 61 chr2 212257902 212258382 -40998201 - L2 LINE L2 0 3313 2768 2179 116 76 17 chr2 212258382 212258726 -40997857 + THE1B LTR MaLR 1 364 0 564 165 0 0 chr2 212258735 212258838 -40997745 - L1MB5 LINE L1 0 6174 6072 274 222 167 0 chr2 212258913 212259003 -40997580 + MIR SINE MIR 157 261 -1 2358 81 0 3 chr2 212259960 212260258 -40996325 + AluSx SINE Alu 1 297 -15 315 331 90 8 chr2 212261480 212261613 -40994970 - MER5A DNA MER1_type -45 144 1 868 188 151 64 chr2 212261846 212262039 -40994544 + MER5C DNA MER1_type 1 230 -94 1599 185 3 30 chr2 212262039 212262336 -40994247 - AluJo SINE Alu -23 289 1 868 188 151 64 chr2 212262336 212262440 -40994143 + MER5C DNA MER1_type 230 324 0 728 262 69 60 chr2 212263890 212263989 -40992594 - L2 LINE L2 0 3313 3216 2307 96 0 0 chr2 212263989 212264280 -40992303 + AluSg1 SINE Alu 1 291 -18 728 262 69 60 chr2 212264280 212264387 -40992196 - L2 LINE L2 -97 3216 3111 180 0 0 0 chr2 212264387 212264407 -40992176 + (TATTG)n Simple_repeat Simple_repeat 2 21 0 728 262 69 60 chr2 212264407 212264531 -40992052 - L2 LINE L2 -202 3111 2979 1049 226 183 15 chr2 212264618 212265011 -40991572 - L2 LINE L2 -1145 2169 1711 2030 150 0 3 chr2 212265057 212265350 -40991233 + AluJb SINE Alu 3 294 -18 34 84 0 0 chr2 212266071 212266154 -40990429 + AT_rich Low_complexity Low_complexity 1 83 0 1825 151 0 0 chr2 212266349 212266614 -40989969 - AluSg SINE Alu -23 287 23 2370 89 3 0 chr2 212266978 212267280 -40989303 + AluSx SINE Alu 1 303 -9 22 0 0 0 chr2 212267350 212267372 -40989211 + AT_rich Low_complexity Low_complexity 1 22 0 1754 111 8 0 chr2 212267904 212268147 -40988436 + AluSp SINE Alu 56 300 -13 2403 64 3 10 chr2 212268933 212269246 -40987337 + AluY SINE Alu 1 311 0 692 185 82 14 chr2 212269325 212269471 -40987112 - FRAM SINE Alu -20 156 1 25 0 0 0 chr2 212269568 212269593 -40986990 + AT_rich Low_complexity Low_complexity 1 25 0 320 287 133 21 chr2 212269646 212269834 -40986749 - L1MC/D LINE L1 -339 5782 5572 2267 79 3 54 chr2 212269979 212270295 -40986288 + AluSc SINE Alu 2 301 -8 399 249 58 0 chr2 212270793 212270971 -40985612 + L1M4 LINE L1 2203 2390 -3756 647 265 24 79 chr2 212271727 212272195 -40984388 + L1ME LINE L1 404 845 -5360 929 56 103 0 chr2 212272196 212272322 -40984261 + AluSg/x SINE Alu 162 300 -10 804 194 0 38 chr2 212272500 212272660 -40983923 + FRAM SINE Alu 1 153 -23 596 232 43 92 chr2 212272781 212273172 -40983411 + L1ME LINE L1 1261 1631 -4765 1848 147 6 22 chr2 212273172 212273485 -40983098 + AluJo SINE Alu 5 312 0 596 232 43 92 chr2 212273485 212273516 -40983067 + L1ME LINE L1 1631 1662 -4734 1678 152 122 0 chr2 212273578 212274045 -40982538 + L1MA8 LINE L1 5746 6298 -2 353 286 90 0 chr2 212274056 212274189 -40982394 + L1ME LINE L1 1706 1850 -4546 1968 149 3 0 chr2 212274215 212274516 -40982067 + AluJb SINE Alu 1 302 -10 1163 170 5 16 chr2 212274721 212274915 -40981668 - AluJo SINE Alu -34 278 87 331 117 0 78 chr2 212274921 212274998 -40981585 - L1MA8 LINE L1 -5 6286 6216 382 120 0 13 chr2 212275002 212275077 -40981506 - L1 LINE L1 -1707 4439 4366 2147 108 51 3 chr2 212275077 212275373 -40981210 - AluSx SINE Alu 0 312 3 3809 182 44 43 chr2 212275704 212276706 -40979877 + L1MC4 LINE L1 7035 8037 -5 717 244 52 19 chr2 212276718 212276838 -40979745 + L1MC4 LINE L1 6930 7061 -981 1888 132 59 0 chr2 212276838 212277127 -40979456 + AluSx SINE Alu 1 306 -6 717 244 52 19 chr2 212277127 212277219 -40979364 + L1MC4 LINE L1 7061 7149 -893 1769 176 67 3 chr2 212277249 212277606 -40978977 + L1MB2 LINE L1 5751 6130 -41 1955 133 7 0 chr2 212277606 212277885 -40978698 + AluY SINE Alu 1 281 -30 669 165 5 58 chr2 212278093 212278281 -40978302 + AluSp SINE Alu 129 306 -7 23 0 0 0 chr2 212278428 212278451 -40978132 + AT_rich Low_complexity Low_complexity 1 23 0 2046 99 17 3 chr2 212278491 212278784 -40977799 - AluSc SINE Alu -3 306 10 1641 155 7 38 chr2 212278790 212278939 -40977644 - AluSg SINE Alu -28 282 145 2206 121 3 0 chr2 212278939 212279245 -40977338 - AluSc SINE Alu -2 307 1 1641 155 7 38 chr2 212279245 212279385 -40977198 - AluSg SINE Alu -165 145 2 28 0 0 0 chr2 212279636 212279664 -40976919 + AT_rich Low_complexity Low_complexity 1 28 0 1916 113 11 18 chr2 212279677 212279959 -40976624 - AluSc SINE Alu -29 280 1 4715 129 53 50 chr2 212280367 212280449 -40976134 - L1MA5 LINE L1 -174 7147 7067 1511 151 86 29 chr2 212280449 212280727 -40975856 - AluJb SINE Alu -14 298 5 4715 129 53 50 chr2 212280727 212281417 -40975166 - L1MA5 LINE L1 -254 7067 6380 1532 157 81 4 chr2 212281417 212281678 -40974905 - AluJb SINE Alu -31 281 1 4715 129 53 50 chr2 212281678 212282411 -40974172 - L1MA5 LINE L1 -941 6380 5632 726 225 0 0 chr2 212282411 212282540 -40974043 - FLAM_A SINE Alu -4 129 1 4715 129 53 50 chr2 212282540 212282685 -40973898 - L1MA5 LINE L1 -1689 5632 5489 1858 150 4 0 chr2 212282694 212282995 -40973588 - AluSx SINE Alu 0 302 1 1443 179 40 32 chr2 212283014 212283389 -40973194 - L1MA5 LINE L1 -4731 2437 2060 2236 164 11 52 chr2 212283397 212283612 -40972971 + Tigger2a DNA MER2_type 8 197 -2511 2203 104 10 0 chr2 212283612 212283920 -40972663 - AluSp SINE Alu -2 311 1 2236 164 11 52 chr2 212283920 212284149 -40972434 + Tigger2a DNA MER2_type 197 434 0 9927 167 110 7 chr2 212284149 212284537 -40972046 - L1MA5 LINE L1 -5133 2035 1688 2261 134 86 0 chr2 212284537 212284931 -40971652 - MSTA LTR MaLR 0 428 1 9927 167 110 7 chr2 212284931 212285296 -40971287 - L1MA5 LINE L1 -5480 1688 1362 243 0 0 0 chr2 212285296 212285323 -40971260 + (CAG)n Simple_repeat Simple_repeat 3 29 0 9927 167 110 7 chr2 212285323 212286410 -40970173 - L1MA5 LINE L1 -5806 1362 5 354 96 315 0 chr2 212286415 212286488 -40970095 - L1MA8 LINE L1 -182 6109 6014 296 48 24 0 chr2 212286495 212286537 -40970046 + (TTTTC)n Simple_repeat Simple_repeat 4 46 0 1331 123 81 0 chr2 212286601 212286812 -40969771 + MER30 DNA MER1_type 2 229 -1 264 244 12 12 chr2 212286814 212286896 -40969687 - L1M4 LINE L1 -3129 3017 2936 1662 185 11 3 chr2 212287117 212287403 -40969180 - AluJb SINE Alu -24 288 1 1913 151 7 3 chr2 212287444 212287735 -40968848 + AluSx SINE Alu 1 292 -20 305 155 46 17 chr2 212287742 212287916 -40968667 + (TA)n Simple_repeat Simple_repeat 1 179 0 389 212 84 145 chr2 212287951 212288102 -40968481 - L1MC5 LINE L1 -32 7929 7770 1507 177 66 4 chr2 212288102 212288373 -40968210 - AluJo SINE Alu -24 288 1 389 212 84 145 chr2 212288373 212288475 -40968108 - L1MC5 LINE L1 -191 7770 7702 1363 205 3 46 chr2 212288475 212288778 -40967805 - AluJo SINE Alu -22 290 1 389 212 84 145 chr2 212288778 212288882 -40967701 - L1MC5 LINE L1 -259 7702 7593 1356 189 61 17 chr2 212288923 212289220 -40967363 - L1MB5 LINE L1 0 6174 5865 2101 196 48 19 chr2 212289276 212289795 -40966788 - L1MB5 LINE L1 -814 5332 4799 386 155 18 0 chr2 212289787 212289867 -40966716 - L1MB5 LINE L1 -3126 3020 2938 * 2140 139 0 13 chr2 212290256 212290573 -40966010 - AluSq SINE Alu 0 313 1 1259 84 22 88 chr2 212290606 212290833 -40965750 - L1MA2 LINE L1 -20 6284 6073 1722 159 3 66 chr2 212290885 212291218 -40965365 - AluSx SINE Alu 0 312 1 308 296 37 68 chr2 212291355 212291398 -40965185 - HAL1 LINE L1 -900 1607 1564 825 154 8 0 chr2 212291398 212291528 -40965055 - FLAM_C SINE Alu -2 131 1 308 296 37 68 chr2 212291528 212291646 -40964937 - HAL1 LINE L1 -943 1564 1451 275 193 128 73 chr2 212291761 212291870 -40964713 - L1MEd LINE L1 -4862 1267 1153 393 244 13 0 chr2 212291870 212291947 -40964636 + Tigger5 DNA MER2_type 1 78 -2245 386 188 0 71 chr2 212291947 212292032 -40964551 - Tigger5 DNA MER2_type -3 2320 2242 371 203 0 14 chr2 212292046 212292120 -40964463 + Tigger5 DNA MER2_type 2250 2322 -1 358 308 122 34 chr2 212292120 212292326 -40964257 - L1MEd LINE L1 -4950 1169 982 1956 170 0 3 chr2 212292326 212292638 -40963945 - AluJo SINE Alu -1 311 1 358 308 122 34 chr2 212292638 212292665 -40963918 - L1MEd LINE L1 -5137 982 959 1993 148 0 0 chr2 212292665 212292982 -40963601 - AluSx SINE Alu 0 317 1 358 308 122 34 chr2 212292982 212293328 -40963255 - L1MEd LINE L1 -5160 959 537 2357 84 0 0 chr2 212294740 212295038 -40961545 + AluSx SINE Alu 1 298 -14 30 59 0 0 chr2 212295038 212295089 -40961494 + AT_rich Low_complexity Low_complexity 1 51 0 2072 125 7 7 chr2 212295716 212296020 -40960563 - AluSq SINE Alu -9 304 1 387 0 0 0 chr2 212296234 212296277 -40960306 + (CA)n Simple_repeat Simple_repeat 2 44 0 2347 87 0 0 chr2 212296294 212296592 -40959991 - AluSg SINE Alu -12 298 1 37 69 0 0 chr2 212297001 212297073 -40959510 + AT_rich Low_complexity Low_complexity 1 72 0 5919 124 29 33 chr2 212297788 212298779 -40957804 - L1PA14 LINE L1 -2 6331 5349 6705 74 19 1 chr2 212298779 212300304 -40956279 + L1PA8 LINE L1 4625 6172 0 5919 124 29 33 chr2 212300304 212300503 -40956080 - L1PA14 LINE L1 -984 5349 5151 1649 118 8 16 chr2 212300607 212300862 -40955721 + AluSg SINE Alu 58 310 0 198 0 0 0 chr2 212301166 212301188 -40955395 + (TTTTA)n Simple_repeat Simple_repeat 4 25 0 247 207 25 107 chr2 212301242 212301331 -40955252 + MIR SINE MIR 55 146 -65 296 270 255 30 chr2 212302456 212302656 -40953927 - L2 LINE L2 -946 2368 2124 230 261 0 0 chr2 212302676 212302722 -40953861 + Alu SINE Alu 72 117 -16 23 0 0 0 chr2 212302723 212302746 -40953837 + AT_rich Low_complexity Low_complexity 1 23 0 814 251 6 0 chr2 212302831 212303006 -40953577 + FRAM SINE Alu 1 40 0 1961 151 20 0 chr2 212303066 212303358 -40953225 + AluSx SINE Alu 11 308 -4 1732 113 4 4 chr2 212303401 212303682 -40952901 + AluSx SINE Alu 42 322 0 518 211 154 29 chr2 212303717 212303892 -40952691 - MER5C DNA MER1_type -127 197 1 21 0 0 0 chr2 212304079 212304100 -40952483 + AT_rich Low_complexity Low_complexity 1 21 0 339 290 86 31 chr2 212304793 212304955 -40951628 - L1M4 LINE L1 -1953 4193 4023 2137 98 0 36 chr2 212305287 212305593 -40950990 - AluSc SINE Alu -14 295 1 1438 193 3 64 chr2 212306495 212306670 -40949913 - AluJo SINE Alu -20 292 143 2096 119 0 3 chr2 212306670 212306963 -40949620 - AluSc SINE Alu -17 292 1 1438 193 3 64 chr2 212306963 212307098 -40949485 - AluJo SINE Alu -169 143 1 22 0 0 0 chr2 212307303 212307325 -40949258 + AT_rich Low_complexity Low_complexity 1 22 0 30 83 0 0 chr2 212307408 212307480 -40949103 + AT_rich Low_complexity Low_complexity 1 72 0 650 203 8 0 chr2 212307588 212307721 -40948862 - L1MC2 LINE L1 0 6344 6211 1788 152 7 21 chr2 212307781 212308071 -40948512 - AluSx SINE Alu -26 286 1 1291 183 5 0 chr2 212308275 212308488 -40948095 + AluJb SINE Alu 85 298 -14 544 173 49 99 chr2 212309177 212309219 -40947364 - MER5B DNA MER1_type -24 154 111 2131 125 0 0 chr2 212309219 212309516 -40947067 + AluSx SINE Alu 1 297 -15 544 173 49 99 chr2 212309516 212309635 -40946948 - MER5B DNA MER1_type -67 111 1 315 248 152 9 chr2 212309722 212309827 -40946756 - Charlie8 DNA MER1_type -2260 157 38 2104 137 0 7 chr2 212309992 212310299 -40946284 + AluSx SINE Alu 1 305 -7 23 0 0 0 chr2 212310310 212310333 -40946250 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr2 212310659 212310684 -40945899 + AT_rich Low_complexity Low_complexity 1 25 0 846 132 0 0 chr2 212310684 212310805 -40945778 - AluSx SINE Alu -18 292 172 621 184 0 9 chr2 212310806 212310920 -40945663 - AluSx SINE Alu -200 113 1 248 291 44 25 chr2 212310923 212311081 -40945502 - L1ME LINE L1 -446 5675 5515 300 121 0 61 chr2 212311094 212311160 -40945423 + L1ME4a LINE L1 6060 6121 0 282 217 102 45 chr2 212311251 212311353 -40945230 + L1ME4a LINE L1 5955 6071 -50 2363 86 7 7 chr2 212311353 212311656 -40944927 - AluSp SINE Alu -10 303 1 282 217 102 45 chr2 212311656 212311710 -40944873 + L1ME4a LINE L1 6071 6120 -1 26 0 0 0 chr2 212311749 212311775 -40944808 + AT_rich Low_complexity Low_complexity 1 26 0 1986 128 16 7 chr2 212311811 212312117 -40944466 + AluSx SINE Alu 3 311 -1 26 64 0 0 chr2 212312544 212312591 -40943992 + AT_rich Low_complexity Low_complexity 1 47 0 2200 99 0 23 chr2 212313669 212313973 -40942610 - AluSx SINE Alu -15 297 1 1380 92 46 84 chr2 212314265 212314504 -40942079 + MER30 DNA MER1_type 1 230 0 305 327 82 0 chr2 212315164 212315274 -40941309 - L2 LINE L2 -6 3266 3148 374 273 11 0 chr2 212316333 212316421 -40940162 - L2 LINE L2 -3 3310 3222 2041 100 25 4 chr2 212316489 212316769 -40939814 - AluSx SINE Alu -14 298 13 749 288 42 19 chr2 212317501 212317814 -40938769 + L1MC4a LINE L1 5508 5827 -1981 214 220 11 11 chr2 212317879 212317970 -40938613 + (TA)n Simple_repeat Simple_repeat 2 92 0 23 0 0 0 chr2 212318980 212319003 -40937580 + AT_rich Low_complexity Low_complexity 1 23 0 878 207 17 11 chr2 212319006 212319180 -40937403 + FAM SINE Alu 1 175 0 217 243 200 0 chr2 212319333 212319403 -40937180 - L2 LINE L2 -2 3270 3187 978 80 0 7 chr2 212319967 212320104 -40936479 + MER85 DNA T2_type 1 136 -3 2186 115 0 13 chr2 212320161 212320473 -40936110 + AluSx SINE Alu 3 310 -2 22 0 0 0 chr2 212320672 212320694 -40935889 + AT_rich Low_complexity Low_complexity 1 22 0 662 236 57 0 chr2 212320740 212320897 -40935686 + MIR SINE MIR 97 262 0 1484 162 4 4 chr2 212321506 212321747 -40934836 - AluJb SINE Alu -23 289 49 22 0 0 0 chr2 212322281 212322303 -40934280 + AT_rich Low_complexity Low_complexity 1 22 0 251 284 122 0 chr2 212322406 212322480 -40934103 + MIR SINE MIR 47 129 -79 336 163 407 15 chr2 212322526 212322661 -40933922 - MER5A DNA MER1_type 0 189 2 203 240 0 0 chr2 212322661 212322709 -40933874 + MIR SINE MIR 161 208 -54 2427 83 0 0 chr2 212322779 212323081 -40933502 + AluSc SINE Alu 1 302 -7 1823 136 0 71 chr2 212323267 212323591 -40932992 + AluSx SINE Alu 1 301 -11 2316 89 3 0 chr2 212323940 212324232 -40932351 - AluSg SINE Alu -17 293 1 663 271 60 23 chr2 212324393 212324611 -40931972 - MIR SINE MIR -21 241 16 612 233 80 12 chr2 212326820 212326983 -40929600 + MIR SINE MIR 89 262 0 844 256 46 0 chr2 212327081 212327319 -40929264 - L1MA9 LINE L1 -38 6274 6026 1909 159 17 0 chr2 212327323 212327618 -40928965 - AluJb SINE Alu -12 300 1 2262 98 23 3 chr2 212328039 212328346 -40928237 + AluSq SINE Alu 1 313 0 551 178 144 0 chr2 212328996 212329114 -40927469 - MER6 DNA MER2_type -730 135 1 1974 107 27 0 chr2 212329587 212329885 -40926698 + AluSx SINE Alu 1 306 -6 2072 93 19 13 chr2 212330061 212330371 -40926212 - AluYb8 SINE Alu -6 312 1 1452 218 77 31 chr2 212330371 212330669 -40925914 - L1MCa LINE L1 -5943 483 159 189 0 0 0 chr2 212330669 212330690 -40925893 + (TC)n Simple_repeat Simple_repeat 1 21 0 1452 218 77 31 chr2 212330690 212330809 -40925774 - L1MCa LINE L1 -6267 159 47 1621 193 3 7 chr2 212330974 212331264 -40925319 + AluJo SINE Alu 1 289 -23 990 195 56 0 chr2 212331410 212331605 -40924978 + MER3 DNA MER1_type 1 206 -3 315 71 0 0 chr2 212332071 212332113 -40924470 + (CA)n Simple_repeat Simple_repeat 1 42 0 2008 98 3 63 chr2 212332387 212332728 -40923855 + AluSc SINE Alu 1 309 0 2331 80 6 16 chr2 212333027 212333338 -40923245 - AluSx SINE Alu -4 308 1 403 205 0 0 chr2 212333714 212333792 -40922791 - AluJo SINE Alu -11 301 224 1018 145 0 7 chr2 212333792 212333944 -40922639 - AluJo SINE Alu -161 151 1 4035 120 42 9 chr2 212334136 212334152 -40922431 + L1PA16 LINE L1 5484 5498 -668 2247 78 10 26 chr2 212334152 212334460 -40922123 + AluSc SINE Alu 1 303 -6 4035 120 42 9 chr2 212334460 212335094 -40921489 + L1PA16 LINE L1 5498 6155 -11 1579 164 51 27 chr2 212335095 212335387 -40921196 + AluJo SINE Alu 1 299 -13 782 148 21 0 chr2 212335707 212335849 -40920734 + L1MB3 LINE L1 5986 6130 -53 2262 118 0 3 chr2 212335850 212336147 -40920436 - AluSx SINE Alu -16 296 1 1643 179 52 7 chr2 212336258 212336549 -40920034 + AluJb SINE Alu 5 308 -4 1641 158 8 0 chr2 212337063 212337322 -40919261 - AluJb SINE Alu -11 301 41 2284 116 36 28 chr2 212337323 212337684 -40918899 + THE1B LTR MaLR 1 364 0 260 139 23 0 chr2 212337684 212337727 -40918856 - AluJb SINE Alu -254 45 2 1365 160 101 2 chr2 212338102 212338434 -40918149 + MER66A LTR ERV1 27 475 -3 592 175 50 8 chr2 212338585 212338705 -40917878 + FLAM_C SINE Alu 9 133 -10 2101 114 4 0 chr2 212338713 212338993 -40917590 + AluSx SINE Alu 1 281 -31 408 330 92 0 chr2 212339063 212339248 -40917335 + MIR SINE MIR 15 216 -46 919 214 129 8 chr2 212339258 212339403 -40917180 + AluSx SINE Alu 1 127 -185 2216 105 3 22 chr2 212339403 212339718 -40916865 + AluSx SINE Alu 1 309 -3 919 214 129 8 chr2 212339718 212339820 -40916763 + AluSx SINE Alu 127 278 -34 1209 92 0 0 chr2 212340003 212340167 -40916416 - AluSg/x SINE Alu -13 296 133 2391 53 0 50 chr2 212340217 212340535 -40916048 - AluY SINE Alu -9 302 1 2459 83 0 0 chr2 212341759 212342060 -40914523 - AluSx SINE Alu -11 301 1 203 207 310 17 chr2 212342522 212342639 -40913944 + MIR SINE MIR 29 186 -22 1172 232 68 91 chr2 212343209 212343726 -40912857 + MER21B LTR ERV1 96 600 -263 917 66 36 51 chr2 212343728 212343865 -40912718 + AluSq/x SINE Alu 1 135 -177 2306 115 0 3 chr2 212343865 212344179 -40912404 + AluSq SINE Alu 1 313 0 221 167 0 0 chr2 212344219 212344261 -40912322 + A-rich Low_complexity Low_complexity 1 42 0 1979 134 31 0 chr2 212344269 212344559 -40912024 + AluJb SINE Alu 1 299 -13 2909 208 63 27 chr2 212344560 212345373 -40911210 + L1ME1 LINE L1 5320 6161 -5 360 0 0 0 chr2 212346274 212346314 -40910269 + (TA)n Simple_repeat Simple_repeat 1 40 0 30 27 0 0 chr2 212347754 212347791 -40908792 + AT_rich Low_complexity Low_complexity 1 37 0 27 29 0 0 chr2 212347997 212348031 -40908552 + AT_rich Low_complexity Low_complexity 1 34 0 2334 104 0 0 chr2 212348112 212348409 -40908174 - AluSq SINE Alu -16 297 1 21 71 0 0 chr2 212348517 212348559 -40908024 + AT_rich Low_complexity Low_complexity 1 42 0 189 121 0 0 chr2 212349158 212349191 -40907392 + (CATA)n Simple_repeat Simple_repeat 2 34 0 1458 176 64 20 chr2 212350010 212350306 -40906277 + AluJb SINE Alu 1 309 -3 23 54 0 0 chr2 212351629 212351666 -40904917 + AT_rich Low_complexity Low_complexity 1 37 0 1425 136 123 79 chr2 212351766 212352082 -40904501 + MER1B DNA MER1_type 10 339 0 262 333 12 22 chr2 212352102 212352200 -40904383 - MER5A DNA MER1_type -11 167 70 1129 227 80 13 chr2 212352201 212352514 -40904069 + MER2 DNA MER2_type 4 337 -8 414 0 0 0 chr2 212352520 212352566 -40904017 + (TA)n Simple_repeat Simple_repeat 1 46 0 1805 181 0 0 chr2 212352925 212353224 -40903359 + AluJb SINE Alu 1 299 -13 2335 101 7 3 chr2 212353354 212353661 -40902922 - AluSx SINE Alu 0 312 5 233 296 74 0 chr2 212353669 212353750 -40902833 + MIR SINE MIR 102 188 -74 312 301 150 0 chr2 212353763 212353896 -40902687 + L2 LINE L2 732 884 -2430 2409 96 0 10 chr2 212353896 212354208 -40902375 - AluSx SINE Alu -3 309 1 5405 144 61 41 chr2 212354208 212355530 -40901053 - L1MCa LINE L1 -4166 2260 817 1966 101 47 27 chr2 212355530 212355826 -40900757 - AluSx SINE Alu -10 302 1 5405 144 61 41 chr2 212355826 212356167 -40900416 - L1MCa LINE L1 -5609 817 484 867 165 0 0 chr2 212356167 212356300 -40900283 + FLAM_C SINE Alu 1 133 0 2154 99 7 7 chr2 212356325 212356619 -40899964 + AluSx SINE Alu 1 294 -18 2192 131 0 0 chr2 212356629 212356941 -40899642 + AluSx SINE Alu 1 312 0 648 233 20 68 chr2 212356941 212357236 -40899347 + L1ME4a LINE L1 4015 4347 -1799 800 158 8 8 chr2 212357236 212357369 -40899214 - FLAM_C SINE Alu 0 133 1 648 233 20 68 chr2 212357369 212357532 -40899051 + L1ME4a LINE L1 4347 4516 -1630 * 1389 230 93 43 chr2 212357501 212357562 -40899021 + L1ME4a LINE L1 4815 4872 -1294 2026 127 149 3 chr2 212357562 212357932 -40898651 + MSTB1 LTR MaLR 5 428 -4 1389 230 93 43 chr2 212357932 212358108 -40898475 + L1ME4a LINE L1 4872 5038 -1128 2101 112 0 3 chr2 212358108 212358395 -40898188 + AluSg SINE Alu 1 286 -24 1389 230 93 43 chr2 212358395 212358700 -40897883 + L1ME4a LINE L1 5038 5326 -840 1996 153 35 12 chr2 212358700 212359040 -40897543 - MER7A DNA MER2_type 0 346 1 1389 230 93 43 chr2 212359040 212359452 -40897131 + L1ME4a LINE L1 5326 5815 -351 559 217 0 0 chr2 212359469 212359589 -40896994 + L1MB5 LINE L1 6017 6136 -38 996 205 23 0 chr2 212359705 212359920 -40896663 + L1ME LINE L1 5429 5648 -516 302 231 231 11 chr2 212359920 212360011 -40896572 + L2 LINE L2 3200 3310 -3 325 304 64 36 chr2 212360013 212360128 -40896455 + L1ME LINE L1 5694 5820 -350 2246 98 0 3 chr2 212360128 212360415 -40896168 + AluSx SINE Alu 1 286 -26 325 304 64 36 chr2 212360415 212360442 -40896141 + L1ME LINE L1 5820 5845 -325 2250 43 14 0 chr2 212360521 212360835 -40895748 + AluY SINE Alu 1 318 0 21 0 0 0 chr2 212360920 212360941 -40895642 + AT_rich Low_complexity Low_complexity 1 21 0 229 114 0 0 chr2 212361039 212361083 -40895500 + L1ME4a LINE L1 5966 6009 -112 27 29 0 0 chr2 212361681 212361715 -40894868 + AT_rich Low_complexity Low_complexity 1 34 0 225 214 0 0 chr2 212361762 212361804 -40894779 + L3 LINE CR1 1523 1564 -13 2440 28 0 3 chr2 212363957 212364261 -40892322 - AluY SINE Alu 0 303 1 320 361 125 5 chr2 212364534 212364742 -40891841 + L2 LINE L2 3039 3271 -1 1873 138 11 0 chr2 212365322 212365591 -40890992 + AluSx SINE Alu 5 276 -36 2376 96 3 0 chr2 212366821 212367122 -40889461 - AluSp SINE Alu -11 302 1 196 270 151 48 chr2 212367251 212367377 -40889206 + MIR SINE MIR 46 184 -78 1180 179 14 18 chr2 212367542 212367765 -40888818 + AluJo SINE Alu 1 222 -90 1609 185 27 3 chr2 212368090 212368388 -40888195 + AluJo SINE Alu 1 305 -7 27 0 0 0 chr2 212368533 212368560 -40888023 + AT_rich Low_complexity Low_complexity 1 27 0 1377 199 9 60 chr2 212368800 212369116 -40887467 + AluJb SINE Alu 1 300 -12 351 247 193 36 chr2 212369950 212370116 -40886467 + MLT1J LTR MaLR 271 462 -49 24 53 0 0 chr2 212370288 212370326 -40886257 + AT_rich Low_complexity Low_complexity 1 38 0 2100 121 7 3 chr2 212370467 212370764 -40885819 - AluSx SINE Alu -14 298 1 1926 133 0 36 chr2 212370864 212371165 -40885418 - AluSx SINE Alu -22 290 1 2131 116 0 0 chr2 212371191 212371475 -40885108 - AluSx SINE Alu -28 284 1 2124 115 58 0 chr2 212371716 212372011 -40884572 + AluSx SINE Alu 1 312 0 1349 195 0 0 chr2 212372932 212373153 -40883430 + AluJo SINE Alu 1 221 -91 585 188 23 23 chr2 212373187 212373315 -40883268 + FRAM SINE Alu 48 175 -1 1496 179 39 14 chr2 212373383 212373662 -40882921 - AluJo SINE Alu -26 286 1 2221 83 21 0 chr2 212373773 212374061 -40882522 - AluY SINE Alu -17 294 1 22 94 0 0 chr2 212374405 212374469 -40882114 + AT_rich Low_complexity Low_complexity 1 64 0 2165 125 0 0 chr2 212374572 212374869 -40881714 - AluSx SINE Alu -15 297 1 2245 104 3 0 chr2 212375255 212375544 -40881039 - AluSg SINE Alu -20 290 1 398 264 174 17 chr2 212376078 212376256 -40880327 - MIR SINE MIR -55 207 2 5317 193 55 51 chr2 212376438 212377374 -40879209 - L1 LINE L1 -1892 5673 4742 2181 115 0 0 chr2 212377374 212377662 -40878921 - AluSx SINE Alu -24 288 1 5317 193 55 51 chr2 212377662 212377803 -40878780 - L1 LINE L1 -2823 4742 4603 2283 66 56 0 chr2 212377803 212378091 -40878492 - AluY SINE Alu -7 304 1 5317 193 55 51 chr2 212378091 212378356 -40878227 - L1 LINE L1 -2962 4603 4341 2057 117 6 19 chr2 212378356 212378672 -40877911 - AluSq SINE Alu 0 313 2 5317 193 55 51 chr2 212378672 212379221 -40877362 - L1 LINE L1 -3224 4341 3796 2287 181 68 2 chr2 212379221 212379620 -40876963 - MSTB LTR MaLR 0 426 2 5317 193 55 51 chr2 212379620 212379739 -40876844 - L1 LINE L1 -3769 3796 3679 2407 86 3 0 chr2 212379739 212380040 -40876543 + AluY SINE Alu 1 302 -9 5317 193 55 51 chr2 212380040 212380079 -40876504 - L1 LINE L1 -3886 3679 3642 549 0 0 0 chr2 212380079 212380140 -40876443 + (TG)n Simple_repeat Simple_repeat 2 62 0 5317 193 55 51 chr2 212380140 212380601 -40875982 - L1 LINE L1 -3923 3642 3140 2120 109 27 14 chr2 212382381 212382675 -40873908 - AluSq SINE Alu -15 298 1 2777 276 77 9 chr2 212382751 212384061 -40872522 - L1M2 LINE L1 -4158 3010 1618 317 256 0 24 chr2 212384409 212384491 -40872092 - L1ME2 LINE L1 -112 6052 5973 679 212 64 0 chr2 212384514 212384696 -40871887 - L1MD1 LINE L1 -414 5828 5608 1273 156 0 38 chr2 212384697 212384934 -40871649 + AluJo SINE Alu 84 311 -1 2374 189 52 50 chr2 212385290 212385794 -40870789 - MLT1D LTR MaLR 0 505 1 2146 132 0 0 chr2 212385865 212386161 -40870422 + AluSx SINE Alu 1 296 -16 409 227 62 8 chr2 212386568 212386696 -40869887 + L1ME4a LINE L1 5973 6107 -14 606 191 259 25 chr2 212386756 212386918 -40869665 - AluJb SINE Alu 0 312 113 825 145 6 69 chr2 212386919 212387078 -40869505 - MER21A LTR ERV1 -207 724 576 553 172 252 0 chr2 212387066 212387217 -40869366 - MER21A LTR ERV1 -742 189 1 * 225 0 0 0 chr2 212387253 212387278 -40869305 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 719 213 86 25 chr2 212387956 212388153 -40868430 + MIR SINE MIR 28 236 -26 2488 106 3 0 chr2 212388282 212388621 -40867962 + L1PA16 LINE L1 5674 6013 -153 1236 80 0 0 chr2 212388632 212388783 -40867800 - AluSq/x SINE Alu -162 151 1 527 212 34 8 chr2 212389032 212389150 -40867433 + MER58B DNA MER1_type 221 341 0 525 202 0 0 chr2 212389277 212389361 -40867222 + Tigger3(Golem) DNA MER2_type 2 85 -2944 24588 95 13 191 chr2 212389366 212391531 -40865052 + L1PA8 LINE L1 12 2560 -3612 7793 40 13 0 chr2 212391531 212392680 -40863903 - L1PA5 LINE L1 0 6154 5001 24588 95 13 191 chr2 212392680 212392909 -40863674 + L1PA8 LINE L1 2560 2828 -3344 2519 68 0 7 chr2 212392909 212393217 -40863366 + AluY SINE Alu 1 306 -5 24588 95 13 191 chr2 212393217 212393597 -40862986 + L1PA8 LINE L1 2828 3274 -2898 2486 51 10 0 chr2 212393597 212393892 -40862691 + AluY SINE Alu 1 298 -13 24588 95 13 191 chr2 212393892 212395266 -40861317 + L1PA8 LINE L1 3274 4890 -1282 1652 101 0 0 chr2 212395266 212395484 -40861099 + AluSg SINE Alu 1 218 -92 24588 95 13 191 chr2 212395484 212396314 -40860269 + L1PA8 LINE L1 4890 3173 -2999 2283 107 3 0 chr2 212396314 212396623 -40859960 + AluSg SINE Alu 1 310 0 24588 95 13 191 chr2 212396623 212399170 -40857413 + L1PA8 LINE L1 3172 6169 -3 389 109 0 0 chr2 212399182 212399237 -40857346 + Tigger3(Golem) DNA MER2_type 65 119 -2910 1504 155 17 0 chr2 212399261 212399493 -40857090 + Tigger3(Golem) DNA MER2_type 2802 3037 0 213 328 0 66 chr2 212400353 212400475 -40856108 - MIR SINE MIR -46 216 103 1399 200 59 15 chr2 212400524 212400832 -40855751 + AluJo SINE Alu 3 322 0 651 258 99 43 chr2 212400832 212400992 -40855591 + L1MEc LINE L1 2191 2341 -3874 2121 142 0 0 chr2 212400992 212401294 -40855289 + AluSg SINE Alu 1 302 -8 651 258 99 43 chr2 212401294 212401465 -40855118 + L1MEc LINE L1 2341 2505 -3710 2126 133 10 0 chr2 212401468 212401776 -40854807 + AluSx SINE Alu 1 311 -1 1231 110 12 0 chr2 212401776 212401949 -40854634 + AluSc SINE Alu 132 306 -3 2863 217 64 93 chr2 212401949 212402125 -40854458 + L1MEc LINE L1 2500 2680 -3535 2234 110 10 0 chr2 212402125 212402426 -40854157 + AluSx SINE Alu 1 304 -8 2863 217 64 93 chr2 212402426 212402679 -40853904 + L1MEc LINE L1 2680 2939 -3276 1227 208 9 69 chr2 212402679 212402996 -40853587 + AluJo SINE Alu 3 300 -12 2863 217 64 93 chr2 212402996 212403075 -40853508 + L1MEc LINE L1 2939 3019 -3196 2387 93 0 0 chr2 212403075 212403375 -40853208 + AluSq SINE Alu 1 300 -13 2863 217 64 93 chr2 212403375 212403535 -40853048 + L1MEc LINE L1 3019 3182 -3033 2317 102 0 0 chr2 212403535 212403830 -40852753 + AluSx SINE Alu 6 300 -12 2863 217 64 93 chr2 212403830 212404063 -40852520 + L1MEc LINE L1 3182 3420 -2795 2454 62 7 10 chr2 212404063 212404372 -40852211 + AluY SINE Alu 1 308 -3 2863 217 64 93 chr2 212404372 212404768 -40851815 + L1MEc LINE L1 3420 3762 -2453 2166 38 45 8 chr2 212404768 212405034 -40851549 - AluY SINE Alu -16 295 20 2863 217 64 93 chr2 212405034 212405100 -40851483 + L1MEc LINE L1 3762 3828 -2387 369 145 0 0 chr2 212405107 212405169 -40851414 + (TG)n Simple_repeat Simple_repeat 2 63 0 297 256 12 12 chr2 212405171 212405257 -40851326 + L1MEc LINE L1 3837 3922 -2293 1074 117 0 0 chr2 212405257 212405402 -40851181 + AluSq/x SINE Alu 1 145 -167 2041 125 7 10 chr2 212405402 212405697 -40850886 + AluSx SINE Alu 1 294 -18 2136 138 0 0 chr2 212405707 212406019 -40850564 + AluSx SINE Alu 1 312 0 848 233 161 68 chr2 212406019 212406314 -40850269 + L1MEc LINE L1 4084 4439 -1776 856 158 8 8 chr2 212406314 212406447 -40850136 - FLAM_C SINE Alu 0 133 1 848 233 161 68 chr2 212406447 212406610 -40849973 + L1MEc LINE L1 4439 4585 -1630 * 1649 224 100 43 chr2 212406579 212406640 -40849943 + L1MEc LINE L1 4884 4940 -1295 2204 127 149 3 chr2 212406640 212407010 -40849573 + MSTB1 LTR MaLR 5 428 -4 1649 224 100 43 chr2 212407010 212407186 -40849397 + L1MEc LINE L1 4940 5105 -1130 2107 112 0 3 chr2 212407186 212407473 -40849110 + AluSg SINE Alu 1 286 -24 1649 224 100 43 chr2 212407473 212407778 -40848805 + L1MEc LINE L1 5105 5391 -844 2164 153 35 12 chr2 212407778 212408118 -40848465 - MER7A DNA MER2_type 0 346 1 1649 224 100 43 chr2 212408118 212408535 -40848048 + L1MEc LINE L1 5391 5896 -339 611 217 0 0 chr2 212408546 212408666 -40847917 + L1MB5 LINE L1 6017 6136 -38 1094 237 36 67 chr2 212408751 212409195 -40847388 + L1ME LINE L1 5469 5717 -516 2238 100 0 3 chr2 212409205 212409523 -40847060 + AluSx SINE Alu 1 312 0 2395 39 7 0 chr2 212409598 212409914 -40846669 + AluY SINE Alu 1 318 0 21 0 0 0 chr2 212409999 212410020 -40846563 + AT_rich Low_complexity Low_complexity 1 21 0 245 114 0 0 chr2 212410118 212410162 -40846421 + L1ME4a LINE L1 6035 6078 -112 27 29 0 0 chr2 212410760 212410794 -40845789 + AT_rich Low_complexity Low_complexity 1 34 0 225 214 0 0 chr2 212410841 212410883 -40845700 + L3 LINE CR1 1523 1564 -13 2478 28 0 3 chr2 212413043 212413347 -40843236 - AluY SINE Alu 0 303 1 319 361 125 5 chr2 212413620 212413828 -40842755 + L2 LINE L2 3039 3271 -1 1867 138 11 0 chr2 212414408 212414677 -40841906 + AluSx SINE Alu 5 276 -36 2368 96 3 0 chr2 212415907 212416208 -40840375 - AluSp SINE Alu -11 302 1 1167 179 14 18 chr2 212416628 212416851 -40839732 + AluJo SINE Alu 1 222 -90 1588 185 27 3 chr2 212417176 212417474 -40839109 + AluJo SINE Alu 1 305 -7 27 0 0 0 chr2 212417619 212417646 -40838937 + AT_rich Low_complexity Low_complexity 1 27 0 1343 199 9 60 chr2 212417886 212418202 -40838381 + AluJb SINE Alu 1 300 -12 417 256 199 16 chr2 212419036 212419227 -40837356 + MLT1J LTR MaLR 271 496 -15 24 53 0 0 chr2 212419374 212419412 -40837171 + AT_rich Low_complexity Low_complexity 1 38 0 2168 117 3 3 chr2 212419553 212419851 -40836732 - AluSx SINE Alu -14 298 1 1770 139 3 40 chr2 212419951 212420252 -40836331 - AluSx SINE Alu -22 290 1 2115 120 0 0 chr2 212420279 212420562 -40836021 - AluSx SINE Alu -29 283 1 2082 119 58 0 chr2 212420803 212421098 -40835485 + AluSx SINE Alu 1 312 0 1332 195 0 0 chr2 212422019 212422240 -40834343 + AluJo SINE Alu 1 221 -91 639 188 23 23 chr2 212422274 212422402 -40834181 + FRAM SINE Alu 48 175 -1 1471 179 39 14 chr2 212422470 212422749 -40833834 - AluJo SINE Alu -26 286 1 2232 83 21 0 chr2 212422860 212423148 -40833435 - AluY SINE Alu -17 294 1 22 94 0 0 chr2 212423492 212423556 -40833027 + AT_rich Low_complexity Low_complexity 1 64 0 2160 125 0 0 chr2 212423659 212423956 -40832627 - AluSx SINE Alu -15 297 1 2245 104 3 0 chr2 212424342 212424631 -40831952 - AluSg SINE Alu -20 290 1 388 270 174 17 chr2 212425165 212425343 -40831240 - MIR SINE MIR -55 207 2 3324 163 28 24 chr2 212425428 212426004 -40830579 + MER70B LTR ERVL 1 578 0 1534 188 12 0 chr2 212426298 212426554 -40830029 + AluJo SINE Alu 1 259 -53 1649 191 0 3 chr2 212426695 212426978 -40829605 + AluJb SINE Alu 1 282 -30 183 42 0 0 chr2 212426982 212427006 -40829577 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2364 94 7 0 chr2 212427007 212427316 -40829267 + AluSp SINE Alu 1 311 -2 421 238 0 0 chr2 212427426 212427506 -40829077 - MER58C DNA MER1_type -9 206 127 251 105 0 26 chr2 212427507 212427545 -40829038 - L1ME LINE L1 -352 5812 5776 1881 138 17 3 chr2 212427545 212427842 -40828741 - AluSx SINE Alu -11 301 1 392 255 38 0 chr2 212427861 212427967 -40828616 - MER58C DNA MER1_type -104 111 2 2892 13 0 0 chr2 212428127 212428439 -40828144 + AluYb8 SINE Alu 1 312 -6 1907 219 89 20 chr2 212428461 212428969 -40827614 + L1ME1 LINE L1 5604 6146 -20 1725 163 51 0 chr2 212429233 212429509 -40827074 - AluJo SINE Alu -12 300 11 371 167 11 11 chr2 212429784 212429874 -40826709 + L1M4 LINE L1 5211 5300 -846 457 154 13 0 chr2 212429943 212430021 -40826562 + FLAM_A SINE Alu 47 125 -17 1613 155 0 8 chr2 212430153 212430404 -40826179 + AluJo SINE Alu 1 249 -63 1625 180 0 41 chr2 212430457 212430751 -40825832 + AluJb SINE Alu 3 284 -28 550 256 39 17 chr2 212430827 212431007 -40825576 + L1ME3 LINE L1 5923 6106 -56 2519 47 0 7 chr2 212431008 212431307 -40825276 + AluY SINE Alu 1 297 -14 1071 155 11 27 chr2 212431360 212431547 -40825036 + FRAM SINE Alu 1 176 0 1589 160 89 11 chr2 212431688 212431970 -40824613 - AluJb SINE Alu -8 304 1 810 151 39 0 chr2 212432377 212432624 -40823959 + L1MA9 LINE L1 5938 6290 -22 1709 175 0 24 chr2 212434741 212435032 -40821551 - AluJo SINE Alu -18 294 11 2371 72 3 28 chr2 212436030 212436350 -40820233 - AluSp SINE Alu -1 312 1 2033 148 0 3 chr2 212436928 212437225 -40819358 + AluSx SINE Alu 1 296 -16 2140 100 7 0 chr2 212437227 212437564 -40819019 + AluSg SINE Alu 1 339 0 2545 66 0 0 chr2 212438128 212438429 -40818154 + AluY SINE Alu 1 301 -10 211 70 23 23 chr2 212438429 212438472 -40818111 + (TA)n Simple_repeat Simple_repeat 1 43 0 1060 117 0 56 chr2 212438472 212438669 -40817914 + Tigger4(Zombi) DNA MER2_type 2546 2731 0 2025 133 7 3 chr2 212438677 212438970 -40817613 - AluSx SINE Alu -18 294 1 667 123 19 0 chr2 212439377 212439483 -40817100 + FLAM_A SINE Alu 26 133 -9 2441 84 0 6 chr2 212439554 212439865 -40816718 - AluY SINE Alu -2 309 1 608 191 0 53 chr2 212440360 212440491 -40816092 + FLAM_A SINE Alu 1 124 -9 2010 156 3 10 chr2 212440569 212440883 -40815700 + AluSx SINE Alu 1 312 0 954 127 38 0 chr2 212440907 212441065 -40815518 + L1MB4 LINE L1 6011 6174 -6 189 165 47 24 chr2 212441339 212441424 -40815159 + (CATA)n Simple_repeat Simple_repeat 2 88 0 558 173 161 39 chr2 212441852 212442112 -40814471 - L1MC5 LINE L1 -53 7908 7617 644 218 111 42 chr2 212442132 212442421 -40814162 - L1MC5 LINE L1 -393 7568 7260 676 117 67 0 chr2 212442735 212442855 -40813728 + L1 LINE L1 3734 3861 -2285 1787 183 51 36 chr2 212442855 212443338 -40813245 + MLT2A2 LTR ERVL 1 492 -62 2137 70 77 14 chr2 212443338 212443624 -40812959 + AluSg SINE Alu 1 304 -6 1787 183 51 36 chr2 212443624 212443688 -40812895 + MLT2A2 LTR ERVL 492 554 0 3362 126 44 41 chr2 212443689 212443968 -40812615 + L1MA3 LINE L1 3862 4139 -2166 615 81 0 0 chr2 212443968 212444054 -40812529 + (GGAA)n Simple_repeat Simple_repeat 1 86 0 3362 126 44 41 chr2 212444054 212444377 -40812206 + L1MA3 LINE L1 4139 4460 -1845 2329 109 0 0 chr2 212444377 212444690 -40811893 + AluSq SINE Alu 1 313 0 3362 126 44 41 chr2 212444690 212445686 -40810897 + L1MA3 LINE L1 4460 5579 -726 2038 119 4 0 chr2 212445686 212445964 -40810619 - AluSg SINE Alu -31 279 1 3362 126 44 41 chr2 212445964 212446693 -40809890 + L1MA3 LINE L1 5579 6305 0 1507 98 5 5 chr2 212447103 212447306 -40809277 + AluSq SINE Alu 1 203 -110 289 216 0 104 chr2 212447412 212447480 -40809103 - L1MC5 LINE L1 -56 7905 7854 2145 75 23 0 chr2 212447480 212447745 -40808838 - AluSg SINE Alu -16 294 24 289 216 0 104 chr2 212447745 212447801 -40808782 - L1MC5 LINE L1 -107 7854 7794 1038 140 0 30 chr2 212448826 212448990 -40807593 + AluJb SINE Alu 133 291 -21 2982 168 66 14 chr2 212449334 212450133 -40806450 + L1MB8 LINE L1 5211 6097 -81 181 194 0 0 chr2 212450133 212450164 -40806419 - MER5A DNA MER1_type -150 39 9 1659 174 3 7 chr2 212450304 212450616 -40805967 - AluJb SINE Alu 0 312 2 264 71 0 0 chr2 212450720 212450762 -40805821 + L1MD1 LINE L1 6179 6220 -22 2017 147 3 6 chr2 212450762 212451074 -40805509 + AluSx SINE Alu 1 311 -1 189 200 67 17 chr2 212451449 212451509 -40805074 - L2 LINE L2 -92 3221 3159 345 222 46 19 chr2 212452739 212452847 -40803736 - L1MC5 LINE L1 -48 7913 7803 1137 184 44 22 chr2 212452884 212453155 -40803428 + AluJo SINE Alu 6 282 -30 611 114 45 68 chr2 212453264 212453396 -40803187 + MER58C DNA MER1_type 137 265 0 1220 266 91 103 chr2 212453441 212453736 -40802847 + L2 LINE L2 2297 2594 -720 714 142 8 30 chr2 212453736 212453870 -40802713 - FLAM_C SINE Alu -2 131 1 1220 266 91 103 chr2 212453870 212454263 -40802320 + L2 LINE L2 2594 2977 -337 2452 85 0 3 chr2 212454281 212454587 -40801996 - AluSx SINE Alu -7 305 1 2643 26 0 3 chr2 212455035 212455342 -40801241 + AluYa5 SINE Alu 2 307 -4 229 202 97 27 chr2 212455740 212455824 -40800759 - MIR SINE MIR -51 157 66 2163 65 0 38 chr2 212456344 212456670 -40799913 + AluY SINE Alu 1 315 0 543 274 120 14 chr2 212457877 212458085 -40798498 + MIR SINE MIR 21 250 -12 203 306 0 0 chr2 212458107 212458169 -40798414 + MIR SINE MIR 114 175 -87 2348 67 7 10 chr2 212458263 212458560 -40798023 - AluY SINE Alu -15 296 1 606 74 0 42 chr2 212458707 212458802 -40797781 + AluSp/q SINE Alu 221 311 -2 2016 107 7 14 chr2 212459119 212459408 -40797175 - AluY SINE Alu -24 287 1 287 274 88 18 chr2 212459655 212459768 -40796815 + L2 LINE L2 3189 3309 -4 314 189 189 0 chr2 212459775 212459865 -40796718 + L1ME4a LINE L1 5941 6047 -74 1611 209 3 14 chr2 212459935 212460232 -40796351 - AluJo SINE Alu -18 294 1 1402 182 87 22 chr2 212460244 212460519 -40796064 - AluJb SINE Alu -19 293 1 4184 176 6 38 chr2 212460519 212460624 -40795959 + L1 LINE L1 4074 4181 -1965 1974 144 0 26 chr2 212460624 212460936 -40795647 + AluSx SINE Alu 1 304 -8 4184 176 6 38 chr2 212460936 212461063 -40795520 + L1 LINE L1 4181 4310 -1836 2359 80 7 3 chr2 212461063 212461365 -40795218 + AluSp SINE Alu 1 303 -10 4184 176 6 38 chr2 212461365 212462106 -40794477 + L1 LINE L1 4310 5017 -1129 1380 218 109 8 chr2 212462106 212462636 -40793947 - L1ME LINE L1 -733 5433 4845 1634 223 37 7 chr2 212464498 212464934 -40791649 - L1ME LINE L1 -1286 4860 4412 1861 142 32 7 chr2 212464939 212465221 -40791362 - AluJo SINE Alu -23 289 1 307 302 94 25 chr2 212465229 212465464 -40791119 - L1ME LINE L1 -2888 3258 3008 742 146 116 0 chr2 212465464 212465628 -40790955 - L1MA8 LINE L1 -5 6286 6104 1218 97 31 0 chr2 212465655 212465850 -40790733 - L1MA5 LINE L1 -2 6298 6098 23 0 0 0 chr2 212466050 212466073 -40790510 + AT_rich Low_complexity Low_complexity 1 23 0 313 248 257 0 chr2 212467511 212467612 -40788971 + MIR SINE MIR 14 140 -122 21 36 0 0 chr2 212467947 212467975 -40788608 + AT_rich Low_complexity Low_complexity 1 28 0 391 235 153 15 chr2 212468596 212468726 -40787857 + MIR SINE MIR 74 219 -43 1878 105 0 0 chr2 212468728 212468976 -40787607 + AluSq SINE Alu 26 273 -40 1954 139 0 7 chr2 212469712 212469999 -40786584 + AluSx SINE Alu 12 296 -16 2140 100 7 0 chr2 212470001 212470338 -40786245 + AluSg SINE Alu 1 339 0 2246 80 21 0 chr2 212470902 212471190 -40785393 + AluY SINE Alu 1 294 -17 1496 179 39 14 chr2 212471301 212471580 -40785003 + AluJo SINE Alu 1 286 -26 585 188 23 23 chr2 212471648 212471776 -40784807 - FRAM SINE Alu -1 175 48 1349 195 0 0 chr2 212471810 212472031 -40784552 - AluJo SINE Alu -91 221 1 2124 115 58 0 chr2 212472952 212473247 -40783336 - AluSx SINE Alu 0 312 1 2039 126 0 3 chr2 212473488 212473773 -40782810 + AluSx SINE Alu 1 284 -28 1852 129 7 37 chr2 212473799 212474094 -40782489 + AluSx SINE Alu 1 286 -26 1936 135 21 3 chr2 212474546 212474835 -40781748 + AluSx SINE Alu 1 294 -18 1060 117 0 56 chr2 212474843 212475040 -40781543 - Tigger4(Zombi) DNA MER2_type 0 2731 2546 211 70 23 23 chr2 212475040 212475083 -40781500 + (TA)n Simple_repeat Simple_repeat 2 44 0 2355 67 7 3 chr2 212475083 212475383 -40781200 - AluY SINE Alu -10 301 1 229 202 97 27 chr2 212475903 212475987 -40780596 + MIR SINE MIR 66 157 -51 2526 42 7 3 chr2 212476385 212476691 -40779892 - AluYa5 SINE Alu -4 307 1 599 194 36 7 chr2 212476703 212476842 -40779741 + MIR SINE MIR 90 232 -30 29 47 0 0 chr2 212476843 212476886 -40779697 + AT_rich Low_complexity Low_complexity 1 43 0 27 29 0 0 chr2 212477195 212477229 -40779354 + AT_rich Low_complexity Low_complexity 1 34 0 38 39 0 0 chr2 212477593 212477645 -40778938 + AT_rich Low_complexity Low_complexity 1 52 0 24 32 0 0 chr2 212477788 212477819 -40778764 + AT_rich Low_complexity Low_complexity 1 31 0 269 89 22 0 chr2 212478856 212478901 -40777682 + (TA)n Simple_repeat Simple_repeat 1 46 0 1690 191 3 0 chr2 212479260 212479558 -40777025 + AluJb SINE Alu 1 299 -13 2335 101 7 3 chr2 212479688 212479995 -40776588 - AluSx SINE Alu 0 312 5 233 296 74 0 chr2 212480003 212480084 -40776499 + MIR SINE MIR 102 188 -74 757 319 148 38 chr2 212480097 212480230 -40776353 + L2 LINE L2 732 849 -2465 2354 109 0 10 chr2 212480230 212480542 -40776041 - AluSx SINE Alu -3 309 1 757 319 148 38 chr2 212480542 212481069 -40775514 + L2 LINE L2 849 1465 -1849 248 210 42 76 chr2 212481118 212481237 -40775346 + L2 LINE L2 1770 1884 -1430 2190 111 7 0 chr2 212481371 212481668 -40774915 + AluSx SINE Alu 1 299 -13 284 288 41 0 chr2 212482065 212482138 -40774445 + MIR3 SINE MIR 108 183 -25 1459 199 38 0 chr2 212482514 212482806 -40773777 + AluJb SINE Alu 1 303 -9 2002 116 10 3 chr2 212483043 212483336 -40773247 + AluSq SINE Alu 1 295 -18 225 119 0 0 chr2 212483414 212483456 -40773127 + (TGGA)n Simple_repeat Simple_repeat 4 45 0 2124 133 0 0 chr2 212483461 212483754 -40772829 - AluSq SINE Alu -20 293 1 2069 94 19 42 chr2 212483896 212484057 -40772526 - AluSx SINE Alu -12 300 148 2216 84 39 0 chr2 212484057 212484343 -40772240 - AluY SINE Alu -14 297 1 2069 94 19 42 chr2 212484343 212484488 -40772095 - AluSx SINE Alu -164 148 1 2160 115 0 0 chr2 212484612 212484900 -40771683 - AluSx SINE Alu -24 288 1 2338 74 0 7 chr2 212485412 212485711 -40770872 - AluSg SINE Alu -13 297 1 581 286 22 27 chr2 212485781 212485966 -40770617 - MIR SINE MIR -32 230 47 24 85 0 0 chr2 212486085 212486144 -40770439 + AT_rich Low_complexity Low_complexity 1 59 0 806 196 9 96 chr2 212486343 212486456 -40770127 - MER6B DNA MER2_type -655 210 125 476 168 104 56 chr2 212486456 212486581 -40770002 + FLAM_A SINE Alu 3 133 0 806 196 9 96 chr2 212486581 212486696 -40769887 - MER6B DNA MER2_type -740 125 2 646 221 50 33 chr2 212486792 212486821 -40769762 + MIR SINE MIR 49 76 -186 2446 74 0 0 chr2 212486821 212487120 -40769463 - AluSc SINE Alu -10 299 1 646 221 50 33 chr2 212487120 212487271 -40769312 + MIR SINE MIR 76 232 -30 29 47 0 0 chr2 212487272 212487315 -40769268 + AT_rich Low_complexity Low_complexity 1 43 0 27 29 0 0 chr2 212487624 212487658 -40768925 + AT_rich Low_complexity Low_complexity 1 34 0 38 39 0 0 chr2 212488022 212488074 -40768509 + AT_rich Low_complexity Low_complexity 1 52 0 24 32 0 0 chr2 212488217 212488248 -40768335 + AT_rich Low_complexity Low_complexity 1 31 0 2189 112 3 0 chr2 212489892 212490223 -40766360 - AluSp SINE Alu 0 332 1 1483 107 0 19 chr2 212490303 212490509 -40766074 - AluSx SINE Alu -110 202 1 219 279 89 63 chr2 212490694 212490852 -40765731 + L2 LINE L2 3146 3307 -6 2302 86 3 3 chr2 212491094 212491395 -40765188 - AluSg SINE Alu -9 301 1 21 71 0 0 chr2 212491470 212491512 -40765071 + AT_rich Low_complexity Low_complexity 1 42 0 476 258 137 17 chr2 212491671 212491997 -40764586 + L1MC4a LINE L1 5523 5819 -302 24 32 0 0 chr2 212492693 212492724 -40763859 + AT_rich Low_complexity Low_complexity 1 31 0 2027 131 7 3 chr2 212492794 212493084 -40763499 - AluSx SINE Alu -17 295 5 1276 209 190 47 chr2 212493219 212493683 -40762900 + MLT1F LTR MaLR 5 534 -8 323 290 90 30 chr2 212493729 212493929 -40762654 + L1ME3 LINE L1 5056 5267 -879 408 235 36 20 chr2 212493940 212494140 -40762443 + L1ME3 LINE L1 5281 5484 -691 410 224 130 0 chr2 212494216 212494377 -40762206 + L1MC5 LINE L1 7262 7443 -518 357 159 0 0 chr2 212494594 212494657 -40761926 + (TA)n Simple_repeat Simple_repeat 2 64 0 485 207 38 127 chr2 212494660 212494873 -40761710 + L1MC5 LINE L1 7701 7894 -67 1773 171 0 4 chr2 212494940 212495215 -40761368 + AluJo SINE Alu 5 278 -34 219 36 0 0 chr2 212495218 212495246 -40761337 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 238 236 18 0 chr2 212495286 212495341 -40761242 + L1ME3 LINE L1 5507 5562 -559 715 218 183 42 chr2 212495343 212495519 -40761064 + MER46C DNA MER2_type 9 159 -179 3633 121 4 11 chr2 212495519 212496050 -40760533 + MER1A DNA MER1_type 1 527 0 715 218 183 42 chr2 212496050 212496162 -40760421 + MER46C DNA MER2_type 159 338 0 2556 34 7 0 chr2 212496183 212496480 -40760103 - AluY SINE Alu -12 299 1 363 325 45 15 chr2 212496500 212496734 -40759849 + L1ME3 LINE L1 5588 5829 -333 1788 178 3 0 chr2 212497013 212497300 -40759283 - AluJb SINE Alu -17 295 8 201 39 0 0 chr2 212497304 212497330 -40759253 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 583 174 14 0 chr2 212498692 212498836 -40757747 + GA-rich Low_complexity Low_complexity 1 146 0 1959 147 7 0 chr2 212498969 212499261 -40757322 + AluSx SINE Alu 2 295 -17 2168 125 33 0 chr2 212499676 212499979 -40756604 - AluSq SINE Alu 0 313 1 2382 88 17 0 chr2 212500591 212500886 -40755697 - AluSc SINE Alu -9 300 1 279 0 0 0 chr2 212501235 212501266 -40755317 + (CA)n Simple_repeat Simple_repeat 2 32 0 1976 132 37 7 chr2 212501548 212501843 -40754740 - AluSx SINE Alu -8 304 1 2259 109 0 0 chr2 212502429 212502732 -40753851 + AluSx SINE Alu 3 305 -7 1965 134 18 0 chr2 212502965 212503284 -40753299 + AluSx SINE Alu 1 324 0 231 94 0 0 chr2 212504194 212504226 -40752357 + U2 snRNA snRNA 2 33 -155 2301 93 0 17 chr2 212504487 212504788 -40751795 - AluY SINE Alu -15 296 1 2301 95 3 0 chr2 212504788 212505082 -40751501 - AluSg1 SINE Alu -14 295 1 21 36 0 0 chr2 212505697 212505725 -40750858 + AT_rich Low_complexity Low_complexity 1 28 0 2033 131 13 10 chr2 212506200 212506505 -40750078 + AluSx SINE Alu 1 306 -6 231 217 43 0 chr2 212506515 212506584 -40749999 + (TTA)n Simple_repeat Simple_repeat 3 74 0 29 0 0 0 chr2 212507010 212507039 -40749544 + AT_rich Low_complexity Low_complexity 1 29 0 550 283 66 0 chr2 212507048 212507200 -40749383 - MIR SINE MIR -89 173 12 2379 95 0 0 chr2 212507385 212507679 -40748904 + AluSg SINE Alu 1 294 -16 1745 159 58 4 chr2 212508184 212508460 -40748123 + AluJb SINE Alu 1 291 -21 31 26 0 0 chr2 212508479 212508517 -40748066 + AT_rich Low_complexity Low_complexity 1 38 0 553 258 98 12 chr2 212508736 212508899 -40747684 - MIR SINE MIR -51 211 35 2185 114 3 0 chr2 212509666 212510013 -40746570 + AluSx SINE Alu 1 312 0 237 175 0 0 chr2 212510068 212510108 -40746475 + Alu SINE Alu 8 47 -86 * 285 174 0 0 chr2 212510105 212510151 -40746432 + AluJ/FRAM SINE Alu 229 274 -28 2135 122 0 30 chr2 212510158 212510462 -40746121 - AluSg SINE Alu -15 295 1 34 0 0 0 chr2 212510474 212510508 -40746075 + AT_rich Low_complexity Low_complexity 1 34 0 5365 183 10 4 chr2 212510527 212511651 -40744932 + L1P LINE L1 4011 5141 -1005 954 127 38 0 chr2 212511753 212511911 -40744672 + L1MB4 LINE L1 6011 6174 -6 189 165 47 24 chr2 212512185 212512270 -40744313 + (CATA)n Simple_repeat Simple_repeat 2 88 0 558 173 161 39 chr2 212512698 212512958 -40743625 - L1MC5 LINE L1 -53 7908 7617 644 218 111 42 chr2 212512978 212513267 -40743316 - L1MC5 LINE L1 -393 7568 7260 676 117 67 0 chr2 212513581 212513701 -40742882 + L1 LINE L1 3734 3861 -2285 1787 180 51 19 chr2 212513701 212514183 -40742400 + MLT2A2 LTR ERVL 1 508 -46 2068 92 78 11 chr2 212514184 212514468 -40742115 + AluSg SINE Alu 1 303 -7 1220 266 91 103 chr2 212514486 212514879 -40741704 - L2 LINE L2 -337 2977 2594 714 142 8 30 chr2 212514879 212515013 -40741570 + FLAM_C SINE Alu 1 131 -2 1220 266 91 103 chr2 212515013 212515308 -40741275 - L2 LINE L2 -720 2594 2297 723 115 70 51 chr2 212515353 212515510 -40741073 - MER58 DNA MER1_type -76 265 106 1673 171 27 0 chr2 212515569 212515861 -40740722 - AluJo SINE Alu -7 305 6 345 222 46 19 chr2 212515898 212516006 -40740577 + L1MC5 LINE L1 7803 7913 -48 364 254 29 29 chr2 212517519 212517657 -40738926 + L1ME4a LINE L1 5956 6093 -28 2294 94 0 7 chr2 212518024 212518333 -40738250 - AluSp SINE Alu -2 311 5 729 174 0 36 chr2 212518372 212518510 -40738073 - FLAM_C SINE Alu 0 133 1 5387 162 54 47 chr2 212518510 212518851 -40737732 + L1MCa LINE L1 484 821 -5605 2029 96 40 36 chr2 212518851 212519152 -40737431 + AluSx SINE Alu 1 302 -10 5387 162 54 47 chr2 212519152 212520474 -40736109 + L1MCa LINE L1 821 2133 -4293 2392 81 10 0 chr2 212520474 212520769 -40735814 + AluSq SINE Alu 1 298 -15 5387 162 54 47 chr2 212520769 212520840 -40735743 + L1MCa LINE L1 2133 2202 -4224 1876 169 13 10 chr2 212520840 212521142 -40735441 + AluJo SINE Alu 1 303 -9 5387 162 54 47 chr2 212521142 212521833 -40734750 + L1MCa LINE L1 2202 2887 -3539 2145 105 7 13 chr2 212521833 212522137 -40734446 - AluSq SINE Alu -11 302 1 5387 162 54 47 chr2 212522137 212522275 -40734308 + L1MCa LINE L1 2887 3023 -3403 2084 123 14 0 chr2 212522275 212522567 -40734016 - AluSg SINE Alu -14 296 1 2182 123 0 3 chr2 212522567 212522867 -40733716 - AluSx SINE Alu -13 299 1 5387 162 54 47 chr2 212522867 212522916 -40733667 + L1MCa LINE L1 3023 3070 -3356 8064 75 7 9 chr2 212522916 212523990 -40732593 + MER11C LTR ERVK 1 1071 0 5387 162 54 47 chr2 212523990 212524289 -40732294 + L1MCa LINE L1 3070 3507 -2919 2194 125 3 3 chr2 212524667 212524979 -40731604 - AluSx SINE Alu 0 312 1 426 273 193 0 chr2 212526348 212526498 -40730085 + MER5A DNA MER1_type 8 186 -3 1220 271 101 82 chr2 212526680 212526927 -40729656 - L2 LINE L2 -1 3312 3071 1588 188 19 19 chr2 212526927 212527236 -40729347 - AluJo SINE Alu -3 309 1 1220 271 101 82 chr2 212527236 212527269 -40729314 - L2 LINE L2 -242 3071 3040 2497 82 0 0 chr2 212527269 212527572 -40729011 + AluSx SINE Alu 3 305 -7 1220 271 101 82 chr2 212527572 212527983 -40728600 - L2 LINE L2 -273 3040 2585 714 142 8 30 chr2 212527983 212528117 -40728466 + FLAM_C SINE Alu 1 131 -2 1220 271 101 82 chr2 212528117 212528412 -40728171 - L2 LINE L2 -728 2585 2297 723 115 70 51 chr2 212528457 212528614 -40727969 - MER58 DNA MER1_type -76 265 106 1673 171 27 0 chr2 212528673 212528965 -40727618 - AluJo SINE Alu -7 305 6 345 222 46 19 chr2 212529002 212529110 -40727473 + L1MC5 LINE L1 7803 7913 -48 2189 74 0 11 chr2 212530391 212530675 -40725908 - AluSx SINE Alu -31 281 1 26 50 0 0 chr2 212531360 212531400 -40725183 + AT_rich Low_complexity Low_complexity 1 40 0 23 0 0 0 chr2 212531626 212531649 -40724934 + AT_rich Low_complexity Low_complexity 1 23 0 411 263 30 23 chr2 212531760 212531893 -40724690 - MIR SINE MIR -13 249 116 21 0 0 0 chr2 212532499 212532520 -40724063 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 212532649 212532677 -40723906 + AT_rich Low_complexity Low_complexity 1 28 0 284 284 45 11 chr2 212533308 212533396 -40723187 + MIR SINE MIR 55 145 -63 674 251 118 37 chr2 212533540 212534114 -40722469 - L1MC5 LINE L1 -30 7931 7311 318 194 97 40 chr2 212534248 212534372 -40722211 - L1MC5 LINE L1 -884 7077 6947 28 79 0 0 chr2 212534874 212534937 -40721646 + AT_rich Low_complexity Low_complexity 1 63 0 675 83 76 38 chr2 212534937 212535069 -40721514 - L1MA7 LINE L1 -6 6285 6149 201 116 0 47 chr2 212535592 212535635 -40720948 + (TAA)n Simple_repeat Simple_repeat 2 42 0 1240 187 64 9 chr2 212535885 212536104 -40720479 + AluJb SINE Alu 3 233 -79 1791 248 129 8 chr2 212536137 212536786 -40719797 - HsTC2c DNA MER2_type 0 729 2 1672 248 71 31 chr2 212536969 212537490 -40719093 + MLT1F LTR MaLR 1 542 0 1957 62 0 12 chr2 212537514 212537757 -40718826 + AluY SINE Alu 1 240 -71 2262 110 7 0 chr2 212537799 212538099 -40718484 - AluSx SINE Alu -6 306 5 2468 46 0 0 chr2 212538116 212538438 -40718145 - AluY SINE Alu 0 322 1 2236 111 0 3 chr2 212539298 212539595 -40716988 - AluSc SINE Alu -13 296 1 2267 98 17 0 chr2 212539596 212539892 -40716691 - AluSp SINE Alu -12 301 1 275 204 0 0 chr2 212540333 212540382 -40716201 + Charlie5 DNA MER1_type 161 209 -2403 787 211 74 0 chr2 212540695 212540885 -40715698 - MIR SINE MIR -5 257 54 715 256 126 10 chr2 212541022 212541229 -40715354 - MIR SINE MIR -11 251 21 461 309 58 11 chr2 212541559 212541750 -40714833 + MIR SINE MIR 2 201 -61 198 103 0 0 chr2 212542105 212542134 -40714449 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 328 238 56 56 chr2 212542578 212542614 -40713969 - L1MA10 LINE L1 0 6334 6299 2286 235 120 8 chr2 212542614 212542826 -40713757 - L1ME1 LINE L1 -28 6138 5951 1488 161 75 19 chr2 212542826 212543140 -40713443 + AluJo SINE Alu 1 329 0 2286 235 120 8 chr2 212543140 212543780 -40712803 - L1ME1 LINE L1 -215 5951 5188 1435 189 0 8 chr2 212543870 212544118 -40712465 - AluJo SINE Alu -66 246 1 436 221 8 0 chr2 212544120 212544247 -40712336 - L1ME1 LINE L1 -950 5196 5069 265 62 42 0 chr2 212544261 212544309 -40712274 + (TCTTG)n Simple_repeat Simple_repeat 2 51 0 206 77 0 0 chr2 212544309 212544335 -40712248 + (TTTCC)n Simple_repeat Simple_repeat 5 30 0 889 113 11 38 chr2 212544335 212544520 -40712063 + (TTCCC)n Simple_repeat Simple_repeat 1 180 0 288 53 0 0 chr2 212544522 212544560 -40712023 + (TCCTG)n Simple_repeat Simple_repeat 3 40 0 1896 130 37 0 chr2 212544560 212544830 -40711753 - AluSx SINE Alu -30 282 3 596 303 77 21 chr2 212544919 212545206 -40711377 - L2 LINE L2 -1 3312 3010 360 120 0 0 chr2 212545893 212545943 -40710640 - AluSp/q SINE Alu -41 262 213 757 276 48 14 chr2 212546494 212546742 -40709841 - L2 LINE L2 -304 3009 2738 1156 214 139 124 chr2 212547195 212547721 -40708862 - MER21B LTR ERV1 -114 749 208 2268 109 10 3 chr2 212547721 212548025 -40708558 - AluSc SINE Alu -3 306 1 1156 214 139 124 chr2 212548025 212548223 -40708360 - MER21B LTR ERV1 -655 208 14 1696 157 45 11 chr2 212548599 212548886 -40707697 + AluJb SINE Alu 3 299 -13 475 292 87 67 chr2 212548985 212549283 -40707300 - L2 LINE L2 -438 2876 2573 21 0 0 0 chr2 212550233 212550254 -40706329 + AT_rich Low_complexity Low_complexity 1 21 0 787 175 0 0 chr2 212551173 212551299 -40705284 + FLAM_C SINE Alu 1 126 -7 2156 77 0 14 chr2 212551349 212551659 -40704924 - AluY SINE Alu 0 306 1 1305 213 6 49 chr2 212551665 212551989 -40704594 - MLT1A1 LTR MaLR -55 310 1 1085 94 13 0 chr2 212552033 212552182 -40704401 + AluSp SINE Alu 1 151 -162 1572 84 9 5 chr2 212552183 212552396 -40704187 + AluSp SINE Alu 87 300 -13 21 89 0 0 chr2 212552492 212552548 -40704035 + AT_rich Low_complexity Low_complexity 1 56 0 1338 158 18 14 chr2 212552872 212553094 -40703489 - AluJo SINE Alu 0 312 90 2089 91 0 0 chr2 212553277 212553541 -40703042 + AluSc SINE Alu 36 299 -10 1107 76 0 0 chr2 212554153 212554284 -40702299 - AluSg/x SINE Alu -18 294 164 1013 87 14 7 chr2 212554358 212554496 -40702087 - AluSg SINE Alu -171 139 1 1607 112 8 4 chr2 212555139 212555380 -40701203 + L1PA7 LINE L1 5913 6154 0 22 35 0 0 chr2 212555434 212555463 -40701120 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 212555587 212555608 -40700975 + AT_rich Low_complexity Low_complexity 1 21 0 199 368 123 9 chr2 212555812 212555926 -40700657 - MER5A DNA MER1_type -2 187 61 27 29 0 0 chr2 212556151 212556185 -40700398 + AT_rich Low_complexity Low_complexity 1 34 0 2045 121 7 10 chr2 212556401 212556698 -40699885 + AluSx SINE Alu 1 296 -16 1265 154 71 104 chr2 212557007 212557402 -40699181 - L1MC2 LINE L1 -2 6342 5961 3326 168 33 50 chr2 212557559 212557695 -40698888 - L1MC2 LINE L1 -368 5976 5839 1631 180 33 0 chr2 212557695 212557859 -40698724 - AluJb SINE Alu 0 302 123 342 0 0 0 chr2 212557859 212557897 -40698686 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 1631 180 33 0 chr2 212557897 212558025 -40698558 - AluJb SINE Alu -179 123 1 3326 168 33 50 chr2 212558025 212558658 -40697925 - L1MC2 LINE L1 -505 5839 5242 1469 154 47 91 chr2 212558658 212558956 -40697627 - AluJo SINE Alu -26 286 2 3326 168 33 50 chr2 212558956 212559091 -40697492 - L1MC2 LINE L1 -1102 5242 5106 1209 161 22 123 chr2 212559100 212559283 -40697300 - AluJo SINE Alu -18 284 145 2366 94 0 0 chr2 212559283 212559581 -40697002 + AluSx SINE Alu 1 298 -14 1209 161 22 123 chr2 212559581 212559713 -40696870 - AluJo SINE Alu -157 145 1 264 261 104 35 chr2 212560253 212560368 -40696215 - L1ME LINE L1 -5946 124 2 1762 164 0 14 chr2 212560464 212560756 -40695827 + AluJo SINE Alu 5 292 -20 364 254 29 29 chr2 212561190 212561328 -40695255 + L1ME4a LINE L1 5956 6093 -28 2355 96 0 6 chr2 212561695 212562008 -40694575 - AluSp SINE Alu -2 311 1 22 56 0 0 chr2 212562143 212562179 -40694404 + AT_rich Low_complexity Low_complexity 1 36 0 2076 108 39 26 chr2 212562964 212563269 -40693314 - AluSc SINE Alu 0 309 1 834 165 8 0 chr2 212563343 212563470 -40693113 - FLAM_C SINE Alu -5 128 1 803 232 222 11 chr2 212563523 212564013 -40692570 - LTR50 LTR ERVL -111 684 1 225 163 61 0 chr2 212564385 212564434 -40692149 + L1MA8 LINE L1 5986 6037 -254 566 300 76 49 chr2 212564434 212564804 -40691779 - MLT1I LTR MaLR -4 405 26 551 208 25 8 chr2 212564854 212564974 -40691609 + AluJo SINE Alu 112 233 -79 205 178 0 22 chr2 212565124 212565169 -40691414 + CT-rich Low_complexity Low_complexity 3 46 0 21 36 0 0 chr2 212565619 212565647 -40690936 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 212565705 212565733 -40690850 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr2 212567699 212567728 -40688855 + AT_rich Low_complexity Low_complexity 1 29 0 207 314 35 35 chr2 212567790 212567876 -40688707 - MIR SINE MIR -9 253 168 1258 183 119 0 chr2 212568332 212568567 -40688016 + AluJo SINE Alu 1 263 -49 358 188 14 13 chr2 212568588 212568737 -40687846 + GA-rich Low_complexity Low_complexity 1 149 0 1783 251 63 56 chr2 212568889 212569185 -40687398 + L1MC4 LINE L1 6964 7257 -785 2152 106 3 0 chr2 212569185 212569491 -40687092 - AluSx SINE Alu 0 307 1 1783 251 63 56 chr2 212569491 212570103 -40686480 + L1MC4 LINE L1 7257 7879 -163 1738 201 0 3 chr2 212570114 212570413 -40686170 + AluJo SINE Alu 1 298 -14 2525 55 0 0 chr2 212570613 212570906 -40685677 + AluY SINE Alu 5 297 -14 3807 115 53 33 chr2 212571478 212572262 -40684321 - SVA Other Other -799 1123 432 2175 136 0 0 chr2 212573859 212574168 -40682415 - AluSq SINE Alu -4 309 1 252 156 52 97 chr2 212574733 212574802 -40681781 - L1MEc LINE L1 -1704 4511 4440 1521 199 14 40 chr2 212574802 212575098 -40681485 - AluJo SINE Alu -24 288 1 252 156 52 97 chr2 212575098 212575182 -40681401 - L1MEc LINE L1 -1775 4440 4365 * 626 215 123 42 chr2 212575175 212575436 -40681147 - L1MEc LINE L1 -2054 4161 3880 189 0 0 0 chr2 212575478 212575499 -40681084 + (TC)n Simple_repeat Simple_repeat 2 22 0 1486 155 17 55 chr2 212575499 212575665 -40680918 - AluJo SINE Alu -11 301 149 2106 158 94 3 chr2 212575665 212576057 -40680526 - MSTA LTR MaLR 0 428 1 1486 155 17 55 chr2 212576057 212576180 -40680403 - AluJo SINE Alu -163 149 23 1290 214 97 14 chr2 212576300 212576660 -40679923 - MLT1B LTR MaLR 0 390 1 1814 240 23 5 chr2 212576661 212577098 -40679485 - MLT1B-int LTR MaLR -1 1734 1290 264 286 0 0 chr2 212577229 212577299 -40679284 - MLT1B-int LTR MaLR -968 767 698 2034 189 52 34 chr2 212577414 212578007 -40678576 - MLT1B-int LTR MaLR -629 742 5 363 150 0 0 chr2 212578011 212578071 -40678512 - MLT1B LTR MaLR 0 374 315 280 224 142 30 chr2 212578071 212578205 -40678378 - L1MEc LINE L1 -2496 3719 3571 680 192 0 17 chr2 212578206 212578326 -40678257 - FLAM_A SINE Alu -10 132 15 732 270 3 33 chr2 212578338 212578642 -40677941 - L1MEc LINE L1 -2636 3579 3285 1155 136 0 0 chr2 212578643 212578797 -40677786 + FAM SINE Alu 12 165 -20 349 239 133 54 chr2 212578800 212579095 -40677488 - L1MEc LINE L1 -2923 3292 2961 1498 126 40 7 chr2 212579095 212579373 -40677210 + L1MA8 LINE L1 6001 6287 -4 349 239 133 54 chr2 212579373 212579445 -40677138 - L1MEc LINE L1 -3254 2961 2896 2193 125 0 10 chr2 212579452 212579765 -40676818 - AluSx SINE Alu -2 310 1 352 217 92 0 chr2 212580427 212580547 -40676036 - L1MEc LINE L1 -3739 2476 2346 566 337 23 15 chr2 212580701 212580962 -40675621 - L1MEc LINE L1 -5978 418 156 1758 171 26 7 chr2 212581338 212581642 -40674941 + AluJb SINE Alu 1 310 -2 2536 66 3 0 chr2 212581727 212582029 -40674554 - AluSq SINE Alu -10 303 1 253 306 0 0 chr2 212582088 212582160 -40674423 + MIR3 SINE MIR 130 201 -7 35 0 0 0 chr2 212582180 212582215 -40674368 + AT_rich Low_complexity Low_complexity 1 35 0 1570 104 166 0 chr2 212582267 212582508 -40674075 + AluSg SINE Alu 1 281 -19 1468 97 0 0 chr2 212582336 212582522 -40674061 + AluSg/x SINE Alu 110 295 -15 417 317 94 6 chr2 212582543 212582723 -40673860 + MIR SINE MIR 38 233 -29 230 0 33 0 chr2 212582856 212582886 -40673697 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 27 0 0 0 chr2 212582991 212583018 -40673565 + AT_rich Low_complexity Low_complexity 1 27 0 1670 185 7 10 chr2 212583477 212583775 -40672808 - AluJb SINE Alu -11 301 5 1510 191 81 55 chr2 212583879 212584200 -40672383 - Charlie4a DNA MER1_type -1453 508 169 1426 205 18 25 chr2 212584200 212584520 -40672063 - AluJb SINE Alu 0 318 1 1510 191 81 55 chr2 212584520 212584668 -40671915 - Charlie4a DNA MER1_type -1792 169 26 24 0 0 0 chr2 212584801 212584825 -40671758 + AT_rich Low_complexity Low_complexity 1 24 0 2340 75 0 10 chr2 212585266 212585559 -40671024 + AluY SINE Alu 1 290 -21 23 0 0 0 chr2 212585670 212585693 -40670890 + AT_rich Low_complexity Low_complexity 1 23 0 548 313 94 5 chr2 212586437 212586629 -40669954 + MIR SINE MIR 17 225 -37 304 306 53 85 chr2 212586745 212586958 -40669625 - MLT1J LTR MaLR -105 406 203 1441 194 62 10 chr2 212586958 212587247 -40669336 + AluJo SINE Alu 1 304 -8 304 306 53 85 chr2 212587247 212587314 -40669269 - MLT1J LTR MaLR -308 203 135 487 240 26 13 chr2 212587348 212587502 -40669081 - MLT1J LTR MaLR -355 156 1 460 255 99 89 chr2 212587859 212588173 -40668410 - MLT1J LTR MaLR -94 417 101 405 0 0 0 chr2 212589115 212589160 -40667423 + (TG)n Simple_repeat Simple_repeat 2 46 0 2145 79 32 4 chr2 212590246 212590526 -40666057 - AluSc SINE Alu -21 288 1 209 289 0 0 chr2 212590550 212590602 -40665981 - L2 LINE L2 -4 3309 3258 284 325 102 83 chr2 212591357 212591713 -40664870 + L2 LINE L2 2027 2375 -939 1922 116 4 0 chr2 212591713 212591972 -40664611 - AluSq SINE Alu -53 260 1 284 325 102 83 chr2 212591972 212592228 -40664355 + L2 LINE L2 2375 2656 -658 2281 87 10 0 chr2 212592228 212592528 -40664055 - AluSg SINE Alu -7 303 1 284 325 102 83 chr2 212592528 212592612 -40663971 + L2 LINE L2 2656 2737 -577 189 359 123 19 chr2 212592921 212593027 -40663556 + L2 LINE L2 3137 3253 -19 2309 108 0 0 chr2 212594214 212594511 -40662072 + AluSx SINE Alu 1 297 -15 1377 178 25 0 chr2 212595343 212595585 -40660998 - L1PB4 LINE L1 -4 6152 5905 23 33 0 0 chr2 212595670 212595700 -40660883 + AT_rich Low_complexity Low_complexity 1 30 0 2270 104 7 7 chr2 212595744 212596051 -40660532 + AluSx SINE Alu 1 307 -5 272 48 63 48 chr2 212596053 212596116 -40660467 + GA-rich Low_complexity Low_complexity 4 67 0 4684 154 25 9 chr2 212596116 212596995 -40659588 - L1MB2 LINE L1 -7 6164 5272 315 247 21 0 chr2 212597083 212597176 -40659407 - L1ME LINE L1 -297 5824 5730 2157 111 3 36 chr2 212597411 212597718 -40658865 + AluSg SINE Alu 1 297 -13 2356 107 0 0 chr2 212598088 212598398 -40658185 + AluY SINE Alu 2 311 0 2059 126 30 10 chr2 212598705 212599006 -40657577 + AluSx SINE Alu 1 307 -5 442 314 39 13 chr2 212599132 212599288 -40657295 - MIR3 SINE MIR -21 187 28 2337 102 0 6 chr2 212599976 212600291 -40656292 + AluSp SINE Alu 1 313 0 2197 68 18 0 chr2 212600424 212600726 -40655857 - AluSp SINE Alu 0 307 1 202 28 28 28 chr2 212600891 212600927 -40655656 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 1864 92 72 11 chr2 212600930 212601192 -40655391 - AluSx SINE Alu -34 278 1 535 330 108 0 chr2 212601201 212601404 -40655179 - MIR SINE MIR -12 250 26 376 242 74 13 chr2 212601852 212602001 -40654582 - MER103 DNA DNA -7 159 2 1768 119 166 25 chr2 212602068 212602387 -40654196 - THE1B LTR MaLR 0 364 1 25 65 0 0 chr2 212602882 212602928 -40653655 + AT_rich Low_complexity Low_complexity 1 46 0 24 67 0 0 chr2 212603926 212603971 -40652612 + AT_rich Low_complexity Low_complexity 1 45 0 2498 80 0 3 chr2 212604128 212604429 -40652154 + AluSp SINE Alu 1 300 -13 14088 172 33 41 chr2 212604871 212605674 -40650909 - L1PA15 LINE L1 0 6165 5357 2268 117 0 3 chr2 212605674 212605983 -40650600 - AluSx SINE Alu -4 308 1 14088 172 33 41 chr2 212605983 212606735 -40649848 - L1PA15 LINE L1 -808 5357 4600 2053 134 7 7 chr2 212606735 212607026 -40649557 - AluSx SINE Alu -16 296 6 14088 172 33 41 chr2 212607026 212608404 -40648179 - L1PA15 LINE L1 -1565 4600 3212 2213 119 7 0 chr2 212608404 212608707 -40647876 - AluSx SINE Alu -7 305 1 14088 172 33 41 chr2 212608707 212610108 -40646475 - L1PA15 LINE L1 -2953 3212 1801 2056 128 13 0 chr2 212610108 212610414 -40646169 - AluSg SINE Alu 0 310 1 14088 172 33 41 chr2 212610414 212610443 -40646140 - L1PA15 LINE L1 -4364 1801 1836 2261 71 7 17 chr2 212610443 212610739 -40645844 + AluY SINE Alu 5 297 -14 14088 172 33 41 chr2 212610739 212610810 -40645773 - L1PA15 LINE L1 -4328 1837 1767 311 284 49 0 chr2 212611370 212611472 -40645111 + MIR SINE MIR 149 255 -7 23 0 0 0 chr2 212612598 212612621 -40643962 + AT_rich Low_complexity Low_complexity 1 23 0 2363 82 0 16 chr2 212613654 212613960 -40642623 - AluY SINE Alu -10 301 1 1690 190 31 0 chr2 212614024 212614313 -40642270 + AluJb SINE Alu 1 298 -14 1692 192 7 10 chr2 212614332 212614634 -40641949 + AluSx SINE Alu 1 301 -11 2379 81 0 0 chr2 212614782 212615077 -40641506 - AluSq SINE Alu -18 295 1 1646 178 7 18 chr2 212615646 212615977 -40640606 + AluJb SINE Alu 1 328 0 2092 96 0 0 chr2 212616013 212616273 -40640310 - AluSc SINE Alu -1 308 49 1271 195 113 0 chr2 212616319 212616575 -40640008 + AluJo SINE Alu 5 289 -23 2037 105 51 3 chr2 212616618 212616913 -40639670 - AluSg SINE Alu -1 309 1 1413 169 46 102 chr2 212618830 212619079 -40637504 - MLT1B LTR MaLR 0 390 172 2437 63 0 3 chr2 212619079 212619379 -40637204 - AluY SINE Alu -12 299 1 1413 169 46 102 chr2 212619379 212619542 -40637041 - MLT1B LTR MaLR -218 172 1 2064 148 3 0 chr2 212619999 212620309 -40636274 - AluSx SINE Alu -1 311 1 2105 110 27 10 chr2 212620380 212620681 -40635902 - AluSq SINE Alu -7 306 1 1721 166 25 3 chr2 212620690 212620973 -40635610 - AluJb SINE Alu -9 303 15 1821 129 13 61 chr2 212621755 212622065 -40634518 + AluJo SINE Alu 6 300 -12 2012 128 3 3 chr2 212622085 212622375 -40634208 + AluSx SINE Alu 9 298 -14 2160 72 17 0 chr2 212622441 212622731 -40633852 + AluY SINE Alu 1 295 -16 1607 205 0 24 chr2 212622947 212623244 -40633339 - AluJo SINE Alu -22 290 1 272 330 0 0 chr2 212623329 212623426 -40633157 - L1MC4 LINE L1 -16 8026 7930 304 244 131 25 chr2 212623529 212623689 -40632894 - L1MC5 LINE L1 -313 7648 7472 2295 88 10 0 chr2 212623850 212624144 -40632439 - AluSx SINE Alu -15 297 1 577 224 0 9 chr2 212624425 212624541 -40632042 - AluJ SINE Alu -15 297 183 907 144 8 0 chr2 212624542 212624674 -40631909 - AluJ SINE Alu -179 133 1 2521 66 3 0 chr2 212624680 212624981 -40631602 - AluSx SINE Alu -10 302 1 259 348 43 0 chr2 212625215 212625330 -40631253 - L2 LINE L2 -2 3311 3192 23 0 0 0 chr2 212625334 212625357 -40631226 + AT_rich Low_complexity Low_complexity 1 23 0 539 335 70 16 chr2 212625393 212625635 -40630948 - MIR SINE MIR -5 257 3 243 292 77 60 chr2 212625904 212626072 -40630511 - L2 LINE L2 -546 2768 2598 2267 97 7 7 chr2 212626626 212626925 -40629658 + AluSx SINE Alu 1 299 -13 2002 121 45 0 chr2 212627195 212627484 -40629099 - AluSq SINE Alu -11 302 1 510 209 52 9 chr2 212627519 212627634 -40628949 + FLAM_A SINE Alu 5 124 -9 304 267 155 31 chr2 212627874 212628035 -40628548 + MIR3 SINE MIR 20 200 -8 1110 160 5 42 chr2 212628131 212628344 -40628239 + AluJo SINE Alu 86 290 -22 1218 129 0 5 chr2 212628371 212628557 -40628026 - AluSg/x SINE Alu -7 303 119 2022 99 0 0 chr2 212629011 212629273 -40627310 - AluY SINE Alu -49 262 1 2722 247 77 52 chr2 212629275 212630566 -40626017 + L2 LINE L2 1998 3313 0 2200 118 0 16 chr2 212630602 212630916 -40625667 + AluSx SINE Alu 3 311 -1 1491 153 4 21 chr2 212631047 212631289 -40625294 + AluSx SINE Alu 61 298 -14 300 290 86 0 chr2 212631338 212631431 -40625152 - L1ME4a LINE L1 -204 5917 5817 2211 131 0 6 chr2 212631434 212631746 -40624837 + AluSx SINE Alu 3 312 0 272 333 20 10 chr2 212631771 212631873 -40624710 + L2 LINE L2 2514 2616 -698 714 196 127 50 chr2 212631931 212632331 -40624252 - Charlie4a DNA MER1_type -32 476 18 552 313 67 65 chr2 212632370 212632681 -40623902 + L2 LINE L2 2763 3072 -241 1719 179 0 22 chr2 212632681 212632994 -40623589 - AluJo SINE Alu -6 306 1 552 313 67 65 chr2 212632994 212633073 -40623510 + L2 LINE L2 3072 3149 -164 2197 121 3 0 chr2 212633073 212633380 -40623203 - AluSx SINE Alu 0 312 5 552 313 67 65 chr2 212633380 212633537 -40623046 + L2 LINE L2 3149 3313 0 521 138 0 112 chr2 212633738 212633854 -40622729 - FLAM_C SINE Alu 0 143 41 1185 146 10 34 chr2 212633855 212634060 -40622523 + AluJb SINE Alu 100 299 -13 2150 111 0 7 chr2 212634234 212634532 -40622051 + AluSg SINE Alu 2 297 -13 713 74 19 9 chr2 212634532 212634630 -40621953 - L1MA3 LINE L1 -7 6298 6197 1770 174 0 3 chr2 212634630 212634923 -40621660 - AluJo SINE Alu -15 297 6 900 182 61 0 chr2 212634965 212635130 -40621453 + FAM SINE Alu 1 175 0 227 327 128 18 chr2 212635623 212635849 -40620734 - L3b LINE CR1 -195 1388 1138 1786 144 95 3 chr2 212636008 212636314 -40620269 + MSTA LTR MaLR 1 334 -94 1208 96 56 0 chr2 212636328 212636525 -40620058 + AluSg SINE Alu 1 208 -102 2363 61 7 14 chr2 212636638 212636934 -40619649 - AluY SINE Alu -17 294 1 969 199 75 49 chr2 212636936 212637126 -40619457 + Charlie2 DNA MER1_type 2413 2597 -265 251 0 0 56 chr2 212637126 212637162 -40619421 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1942 112 4 0 chr2 212637163 212637423 -40619160 - AluSx SINE Alu -51 261 1 969 199 75 49 chr2 212637423 212637616 -40618967 + Charlie2 DNA MER1_type 2596 2808 -54 196 77 51 0 chr2 212637622 212637661 -40618922 + (TA)n Simple_repeat Simple_repeat 1 41 0 2227 82 4 0 chr2 212637935 212638244 -40618339 + AluSg SINE Alu 1 310 0 342 272 120 22 chr2 212638759 212638943 -40617640 - MIR SINE MIR -21 241 40 629 160 9 146 chr2 212639071 212639206 -40617377 - MER5A DNA MER1_type -2 187 89 1767 112 3 51 chr2 212639206 212639542 -40617041 - AluJb SINE Alu 0 323 2 629 160 9 146 chr2 212639542 212639618 -40616965 - MER5A DNA MER1_type -100 89 4 1918 75 0 0 chr2 212640825 212641064 -40615519 + AluSc SINE Alu 35 273 -36 212 0 36 0 chr2 212641072 212641100 -40615483 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 2132 235 128 69 chr2 212641350 212642629 -40613954 - L2 LINE L2 -18 3295 1921 935 185 11 11 chr2 212642634 212642812 -40613771 - AluJo/FRAM SINE Alu -6 306 129 2256 126 0 0 chr2 212642815 212643117 -40613466 - AluSx SINE Alu -10 302 1 28 0 0 0 chr2 212643117 212643145 -40613438 + AT_rich Low_complexity Low_complexity 1 28 0 301 260 260 0 chr2 212643296 212643446 -40613137 - L2 LINE L2 -1506 1808 1620 1718 158 17 24 chr2 212643453 212643750 -40612833 + AluJo SINE Alu 1 295 -17 1325 236 121 61 chr2 212643750 212644095 -40612488 + L2 LINE L2 1018 1341 -1973 1690 117 0 32 chr2 212644095 212644342 -40612241 - AluSg SINE Alu -23 287 49 2083 115 24 0 chr2 212644342 212644630 -40611953 - AluSx SINE Alu -17 295 1 2002 151 3 3 chr2 212644632 212644936 -40611647 - AluJb SINE Alu -8 304 1 1325 236 121 61 chr2 212644936 212645140 -40611443 + L2 LINE L2 1341 1604 -1710 2091 134 10 0 chr2 212645146 212645445 -40611138 - AluSx SINE Alu -10 302 1 2669 40 0 0 chr2 212645676 212645978 -40610605 - AluY SINE Alu -9 302 1 2213 102 10 0 chr2 212645978 212646272 -40610311 - AluY SINE Alu -14 297 1 2342 80 56 15 chr2 212646296 212646635 -40609948 - L1PA13 LINE L1 0 6163 5811 913 162 60 0 chr2 212646913 212647080 -40609503 + FRAM SINE Alu 1 174 -2 2288 101 7 0 chr2 212647925 212648223 -40608360 + AluSx SINE Alu 1 300 -12 288 115 0 58 chr2 212648271 212648323 -40608260 - MIR SINE MIR -3 259 211 2251 108 0 3 chr2 212648523 212648810 -40607773 + AluSc SINE Alu 1 286 -23 1826 156 3 33 chr2 212648890 212649192 -40607391 + AluJb SINE Alu 1 293 -19 2203 113 0 0 chr2 212649198 212649490 -40607093 + AluSx SINE Alu 1 292 -20 234 250 16 0 chr2 212649600 212649664 -40606919 + L1P LINE L1 4905 4969 -1177 1593 178 0 11 chr2 212649688 212649957 -40606626 - AluJo SINE Alu -46 266 1 619 208 16 16 chr2 212650183 212650308 -40606275 + FLAM_A SINE Alu 4 128 -5 2303 111 0 0 chr2 212650509 212650806 -40605777 + AluSx SINE Alu 1 297 -15 1001 238 22 0 chr2 212651213 212651440 -40605143 - MIR SINE MIR -11 251 20 2640 46 0 0 chr2 212651729 212652032 -40604551 + AluY SINE Alu 1 303 -8 2176 123 3 7 chr2 212652435 212652726 -40603857 + AluSq SINE Alu 2 293 -20 300 53 0 0 chr2 212652726 212652764 -40603819 + (TA)n Simple_repeat Simple_repeat 1 38 0 2176 123 3 7 chr2 212652764 212652782 -40603801 + AluSq SINE Alu 293 310 -3 206 190 17 17 chr2 212653182 212653240 -40603343 + A-rich Low_complexity Low_complexity 3 60 0 186 133 0 0 chr2 212653307 212653337 -40603246 + (TA)n Simple_repeat Simple_repeat 1 30 0 2000 121 0 0 chr2 212653337 212653609 -40602974 - AluSx SINE Alu -8 304 33 1874 211 39 54 chr2 212653609 212654396 -40602187 - HERV3 LTR ERV1 -7862 873 1 3515 72 19 29 chr2 212654396 212654883 -40601700 - LTR61 LTR ERV1 0 595 114 2092 91 4 4 chr2 212654883 212655158 -40601425 - AluSg1 SINE Alu 0 309 35 1922 138 35 3 chr2 212655410 212655700 -40600883 + AluJb SINE Alu 1 299 -13 1075 130 0 53 chr2 212655732 212655901 -40600682 + AluJb SINE Alu 1 160 -152 497 202 0 0 chr2 212655902 212655991 -40600592 + AluSg/x SINE Alu 215 303 -7 1060 115 290 14 chr2 212656371 212656588 -40599995 - AluSg1 SINE Alu -12 297 21 2087 111 3 41 chr2 212656924 212657058 -40599525 + AluSx SINE Alu 1 139 -173 2444 78 0 3 chr2 212657058 212657364 -40599219 + AluY SINE Alu 1 305 -6 2087 111 3 41 chr2 212657364 212657545 -40599038 + AluSx SINE Alu 139 304 -8 1447 130 0 120 chr2 212660026 212660302 -40596281 - AluJb SINE Alu -69 243 1 747 217 51 0 chr2 212660384 212660541 -40596042 + AluJb SINE Alu 126 290 -22 2297 100 0 13 chr2 212660745 212661054 -40595529 - AluSc SINE Alu -4 305 1 305 287 82 85 chr2 212661105 212661144 -40595439 - L1 LINE L1 -1551 4595 4557 1627 131 7 53 chr2 212661144 212661427 -40595156 - AluJb SINE Alu -4 308 39 305 287 82 85 chr2 212661427 212661728 -40594855 - L1 LINE L1 -1589 4557 4256 265 284 147 14 chr2 212661739 212661957 -40594626 - L1P LINE L1 -1885 4261 4015 873 223 149 3 chr2 212662037 212662333 -40594250 - L1MC4 LINE L1 -15 8027 7689 309 342 33 7 chr2 212662356 212662508 -40594075 - L1 LINE L1 -2254 3892 3737 257 250 50 20 chr2 212662533 212662633 -40593950 - L1P LINE L1 -2456 3690 3588 231 143 24 0 chr2 212663067 212663109 -40593474 + L1MA2 LINE L1 6254 6296 -8 6254 57 9 14 chr2 212663209 212664627 -40591956 + SVA Other Other 1 1254 -132 467 278 32 89 chr2 212664651 212664829 -40591754 + HAL1b LINE L1 29 177 -1171 1801 156 0 20 chr2 212664829 212665124 -40591459 + AluJb SINE Alu 1 289 -23 467 278 32 89 chr2 212665124 212665315 -40591268 + HAL1b LINE L1 177 377 -971 297 0 0 0 chr2 212666543 212666576 -40590007 + (TG)n Simple_repeat Simple_repeat 2 34 0 1768 148 7 46 chr2 212666577 212666880 -40589703 - AluJo SINE Alu -21 291 1 2319 104 0 0 chr2 212666910 212667209 -40589374 + AluSx SINE Alu 1 299 -13 2318 92 0 10 chr2 212667211 212667506 -40589077 + AluY SINE Alu 3 294 -17 27 73 0 0 chr2 212668112 212668167 -40588416 + AT_rich Low_complexity Low_complexity 1 55 0 1713 174 14 24 chr2 212668188 212668481 -40588102 + AluJo SINE Alu 1 290 -22 2066 138 3 3 chr2 212668713 212669017 -40587566 - AluSx SINE Alu -8 304 1 2302 100 3 3 chr2 212669154 212669453 -40587130 + AluSx SINE Alu 1 299 -13 330 316 0 0 chr2 212670188 212670305 -40586278 + MIR3 SINE MIR 90 206 -2 2148 115 0 0 chr2 212671322 212671601 -40584982 + AluSx SINE Alu 1 279 -33 2060 82 67 0 chr2 212672048 212672318 -40584265 - AluSp SINE Alu -4 309 22 1045 153 8 126 chr2 212672366 212672627 -40583956 + AluJo SINE Alu 80 309 -3 1439 74 98 0 chr2 212672814 212673017 -40583566 + L1PB1 LINE L1 5928 6150 -1 1917 129 31 0 chr2 212673088 212673374 -40583209 + AluSg SINE Alu 1 295 -15 433 180 62 47 chr2 212673374 212673493 -40583090 - MER5B DNA MER1_type -54 124 1 316 248 152 9 chr2 212673580 212673685 -40582898 - Charlie8 DNA MER1_type -2260 157 38 2193 134 0 6 chr2 212673850 212674191 -40582392 + AluSx SINE Alu 1 339 0 25 0 0 0 chr2 212674517 212674542 -40582041 + AT_rich Low_complexity Low_complexity 1 25 0 850 132 0 0 chr2 212674542 212674663 -40581920 - AluSx SINE Alu -18 292 172 626 186 0 9 chr2 212674664 212674777 -40581806 - AluSx SINE Alu -199 113 2 235 272 51 32 chr2 212674781 212674939 -40581644 - L1ME LINE L1 -446 5675 5515 314 121 0 61 chr2 212674952 212675018 -40581565 + L1ME4a LINE L1 6060 6121 0 2271 81 7 7 chr2 212675211 212675496 -40581087 - AluSp SINE Alu -10 303 19 2227 125 0 0 chr2 212675499 212675796 -40580787 - AluSx SINE Alu -15 297 1 2140 116 10 0 chr2 212675798 212676091 -40580492 - AluSx SINE Alu -16 296 1 1463 203 0 23 chr2 212676093 212676393 -40580190 - AluJo SINE Alu -19 293 1 213 261 0 0 chr2 212676513 212676559 -40580024 + T-rich Low_complexity Low_complexity 1 46 0 271 224 15 0 chr2 212676581 212676648 -40579935 - LTR41 LTR ERVL -1 772 705 951 149 0 0 chr2 212676656 212676797 -40579786 + FLAM_C SINE Alu 1 141 -2 1245 174 42 64 chr2 212676845 212677110 -40579473 + AluJo SINE Alu 1 259 -53 292 170 0 0 chr2 212677111 212677164 -40579419 - FRAM SINE Alu -48 118 66 1425 239 91 75 chr2 212677177 212677779 -40578804 - LTR41 LTR ERVL -104 669 58 736 167 0 30 chr2 212677795 212677927 -40578656 - FLAM_C SINE Alu -5 128 1 1233 215 75 42 chr2 212678007 212678236 -40578347 - L1MEc LINE L1 -2918 3297 3077 183 42 0 0 chr2 212678236 212678260 -40578323 + (TTG)n Simple_repeat Simple_repeat 2 25 0 2287 63 42 0 chr2 212678262 212678546 -40578037 - AluY SINE Alu -14 297 2 2362 82 20 0 chr2 212678552 212678858 -40577725 - AluSq SINE Alu -1 312 1 2105 100 3 10 chr2 212678858 212679156 -40577427 - AluSc SINE Alu -12 297 1 1233 215 75 42 chr2 212679156 212679418 -40577165 - L1MEc LINE L1 -3141 3074 2778 1512 178 64 4 chr2 212679574 212679855 -40576728 - AluJo SINE Alu -14 298 1 943 265 70 30 chr2 212679855 212680286 -40576297 - L1MEc LINE L1 -3645 2570 2158 2404 106 0 0 chr2 212680286 212680597 -40575986 - AluY SINE Alu 0 311 1 943 265 70 30 chr2 212680597 212680701 -40575882 - L1MEc LINE L1 -4057 2158 2060 1014 204 38 5 chr2 212680701 212680912 -40575671 - MER20 DNA MER1_type -1 218 1 943 265 70 30 chr2 212680912 212681091 -40575492 - L1MEc LINE L1 -4155 2060 1875 260 122 82 0 chr2 212681196 212681245 -40575338 - MLT1D LTR MaLR -363 142 90 2172 135 3 0 chr2 212681247 212681558 -40575025 - AluSx SINE Alu 0 312 1 1839 139 57 0 chr2 212682285 212682565 -40574018 + AluSg SINE Alu 1 296 -14 959 131 19 38 chr2 212682578 212682738 -40573845 + FRAM SINE Alu 1 153 -23 1901 150 0 23 chr2 212682819 212683125 -40573458 + AluSx SINE Alu 1 299 -13 2258 97 0 7 chr2 212683131 212683429 -40573154 + AluSg1 SINE Alu 1 296 -13 289 253 35 11 chr2 212683429 212683516 -40573067 - HsTC2a DNA Tc2 -548 370 282 728 240 31 50 chr2 212683536 212683667 -40572916 - L1MC4 LINE L1 -10 8032 7907 216 97 0 0 chr2 212683667 212683698 -40572885 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 728 240 31 50 chr2 212683698 212683824 -40572759 - L1MC4 LINE L1 -135 7907 7780 965 187 76 0 chr2 212683881 212684079 -40572504 - L1MC4 LINE L1 -369 7673 7461 368 182 39 0 chr2 212684080 212684157 -40572426 - HsTC2a DNA Tc2 -616 302 223 191 59 0 29 chr2 212684159 212684193 -40572390 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 836 147 47 7 chr2 212684235 212684385 -40572198 - L1PB4 LINE L1 0 6156 6001 738 250 5 29 chr2 212684385 212684589 -40571994 - HsTC2a DNA Tc2 -527 217 19 1425 124 120 85 chr2 212684728 212685011 -40571572 + AluJo SINE Alu 1 293 -19 2225 111 3 0 chr2 212685063 212685360 -40571223 - AluSq SINE Alu -13 300 3 1189 45 0 0 chr2 212685361 212685493 -40571090 - AluSq/x SINE Alu -177 136 5 1625 197 0 26 chr2 212685543 212685847 -40570736 + AluJb SINE Alu 6 301 -11 566 168 75 0 chr2 212685925 212686032 -40570551 - AluJb SINE Alu -187 125 11 213 39 0 0 chr2 212686294 212686320 -40570263 + (T)n Simple_repeat Simple_repeat 1 26 0 1347 169 51 4 chr2 212686324 212686561 -40570022 - AluJb SINE Alu -64 248 1 414 57 0 0 chr2 212686599 212686652 -40569931 + (TA)n Simple_repeat Simple_repeat 1 53 0 2442 66 0 3 chr2 212686652 212686956 -40569627 - AluY SINE Alu -8 303 1 1898 117 40 7 chr2 212687322 212687595 -40568988 + AluSx SINE Alu 1 282 -30 1941 126 10 32 chr2 212687831 212688140 -40568443 + AluJb SINE Alu 2 303 -9 336 256 58 50 chr2 212688344 212688415 -40568168 + L1ME4a LINE L1 5970 6044 -77 2411 70 3 0 chr2 212688415 212688713 -40567870 - AluSc SINE Alu -10 299 1 336 256 58 50 chr2 212688713 212688762 -40567821 + L1ME4a LINE L1 6044 6091 -30 724 169 0 39 chr2 212689089 212689219 -40567364 + FLAM_A SINE Alu 3 127 -6 1975 153 0 13 chr2 212689230 212689537 -40567046 + AluSx SINE Alu 1 303 -9 2351 90 0 22 chr2 212689742 212690054 -40566529 - AluSx SINE Alu -7 305 1 316 186 289 10 chr2 212690185 212690282 -40566301 - L2 LINE L2 -1 3312 3189 581 250 11 51 chr2 212690615 212690791 -40565792 + MER5B DNA MER1_type 4 172 -6 568 243 65 18 chr2 212690798 212690967 -40565616 - MER5B DNA MER1_type 0 178 2 195 139 0 0 chr2 212690985 212691021 -40565562 + (T)n Simple_repeat Simple_repeat 1 36 0 1742 230 56 47 chr2 212691413 212691660 -40564923 + LTR40a LTR ERVL 1 244 -275 2292 99 0 3 chr2 212691660 212691962 -40564621 + AluSg SINE Alu 2 302 -8 1742 230 56 47 chr2 212691962 212692228 -40564355 + LTR40a LTR ERVL 244 519 0 21 57 0 0 chr2 212692699 212692734 -40563849 + AT_rich Low_complexity Low_complexity 1 35 0 4058 247 43 30 chr2 212693154 212693245 -40563338 + L1M4 LINE L1 2991 3079 -3067 2289 119 0 0 chr2 212693245 212693556 -40563027 + AluSx SINE Alu 1 311 -1 4058 247 43 30 chr2 212693556 212694246 -40562337 + L1M4 LINE L1 3079 3759 -2387 1498 213 4 0 chr2 212694246 212694552 -40562031 + AluJo SINE Alu 7 313 0 4058 247 43 30 chr2 212694552 212695309 -40561274 + L1M4 LINE L1 3759 4551 -1595 288 263 188 25 chr2 212695400 212695640 -40560943 - L1ME LINE L1 -310 5811 5533 460 250 113 90 chr2 212695866 212696122 -40560461 - MIR SINE MIR 0 262 1 24 32 0 0 chr2 212696495 212696526 -40560057 + AT_rich Low_complexity Low_complexity 1 31 0 4172 184 45 17 chr2 212697282 212698155 -40558428 - L1MB5 LINE L1 -1 6173 5261 180 77 0 0 chr2 212698155 212698181 -40558402 + (TA)n Simple_repeat Simple_repeat 2 27 0 4172 184 45 17 chr2 212698181 212698458 -40558125 - L1MB5 LINE L1 -913 5261 4993 299 351 44 49 chr2 212698568 212698773 -40557810 + MIR SINE MIR 19 222 -40 2032 151 3 3 chr2 212698779 212699084 -40557499 + AluSx SINE Alu 1 305 -7 23 0 0 0 chr2 212699532 212699555 -40557028 + AT_rich Low_complexity Low_complexity 1 23 0 2264 117 0 3 chr2 212699677 212699985 -40556598 - AluSg SINE Alu -3 307 1 2061 131 7 3 chr2 212700164 212700461 -40556122 + AluJb SINE Alu 1 298 -14 295 239 110 9 chr2 212700466 212700575 -40556008 + L1ME3A LINE L1 6034 6153 -17 713 205 0 0 chr2 212700905 212701027 -40555556 + FLAM_A SINE Alu 1 122 -11 2239 92 0 19 chr2 212701122 212701437 -40555146 - AluSc SINE Alu 0 309 1 24 0 0 0 chr2 212701514 212701538 -40555045 + AT_rich Low_complexity Low_complexity 1 24 0 460 157 11 0 chr2 212701933 212702022 -40554561 + L1MA4 LINE L1 6200 6289 -11 1261 176 133 0 chr2 212702332 212702588 -40553995 + AluJo SINE Alu 1 290 -22 1895 155 13 7 chr2 212702591 212702894 -40553689 + AluJo SINE Alu 1 305 -7 1690 188 7 7 chr2 212703397 212703690 -40552893 + AluJb SINE Alu 1 293 -19 2269 116 0 0 chr2 212703693 212703994 -40552589 + AluSg SINE Alu 1 301 -9 948 158 18 6 chr2 212704196 212704367 -40552216 - AluY SINE Alu -138 173 1 2453 68 0 0 chr2 212704402 212704696 -40551887 - AluSc SINE Alu -15 294 1 324 270 234 9 chr2 212705475 212705586 -40550997 + MER5A DNA MER1_type 54 189 0 1841 147 0 100 chr2 212705587 212705927 -40550656 - AluJb SINE Alu -4 308 3 1782 222 114 28 chr2 212706792 212706875 -40549708 + L1ME1 LINE L1 5504 5578 -588 1592 164 96 4 chr2 212706875 212707155 -40549428 + AluJb SINE Alu 1 306 -6 1782 222 114 28 chr2 212707155 212707674 -40548909 + L1ME1 LINE L1 5578 6158 -8 1851 161 10 10 chr2 212707783 212708094 -40548489 + AluJb SINE Alu 1 311 -1 1567 196 18 14 chr2 212708273 212708559 -40548024 + AluJb SINE Alu 1 287 -25 2104 141 0 0 chr2 212708911 212709215 -40547368 - AluSx SINE Alu -8 304 1 331 275 83 58 chr2 212709346 212709466 -40547117 + L2 LINE L2 3137 3259 -13 494 266 138 11 chr2 212709639 212709827 -40546756 + MIR SINE MIR 51 262 0 532 306 62 12 chr2 212709836 212710172 -40546411 - L1MC/D LINE L1 -2199 5609 5257 29 28 0 0 chr2 212710403 212710439 -40546144 + AT_rich Low_complexity Low_complexity 1 36 0 2211 101 0 0 chr2 212710804 212711090 -40545493 - AluSq SINE Alu -27 286 1 221 309 0 0 chr2 212711249 212711330 -40545253 + (TA)n Simple_repeat Simple_repeat 2 82 0 363 166 7 93 chr2 212711390 212711487 -40545096 - L1MC/D LINE L1 -297 5824 5788 2110 120 0 13 chr2 212711487 212711788 -40544795 - AluSx SINE Alu -11 301 5 363 166 7 93 chr2 212711788 212711830 -40544753 - L1MC/D LINE L1 -333 5788 5744 356 307 112 31 chr2 212711854 212711936 -40544647 - L1MC/D LINE L1 -537 5633 5559 1493 152 144 0 chr2 212711936 212712186 -40544397 - AluJb SINE Alu -26 286 1 356 307 112 31 chr2 212712186 212712446 -40544137 - L1MC/D LINE L1 -611 5559 5294 2475 30 13 0 chr2 212712533 212712833 -40543750 - L1PA4 LINE L1 -2 6153 5850 2212 80 3 54 chr2 212713022 212713165 -40543418 + AluSc SINE Alu 1 122 -187 2129 86 3 34 chr2 212713165 212713483 -40543100 + AluSc SINE Alu 1 309 0 2212 80 3 54 chr2 212713483 212713652 -40542931 + AluSc SINE Alu 122 298 -11 1903 177 0 0 chr2 212713674 212713974 -40542609 + AluJb SINE Alu 1 300 -12 278 385 34 0 chr2 212714085 212714202 -40542381 - L2 LINE L2 0 3313 3193 938 105 30 8 chr2 212714407 212714540 -40542043 + AluJo SINE Alu 1 136 -176 21 57 0 0 chr2 212714586 212714621 -40541962 + AT_rich Low_complexity Low_complexity 1 35 0 186 43 0 0 chr2 212714720 212714743 -40541840 + (TTA)n Simple_repeat Simple_repeat 3 25 0 1934 156 0 0 chr2 212714767 212715049 -40541534 - AluSx SINE Alu -30 282 1 22 35 0 0 chr2 212715141 212715170 -40541413 + AT_rich Low_complexity Low_complexity 1 29 0 23 54 0 0 chr2 212716195 212716232 -40540351 + AT_rich Low_complexity Low_complexity 1 37 0 2261 113 0 13 chr2 212717519 212717820 -40538763 + AluSg SINE Alu 1 297 -13 2331 96 0 0 chr2 212718149 212718442 -40538141 + AluSg SINE Alu 1 293 -17 38 0 0 0 chr2 212719299 212719337 -40537246 + AT_rich Low_complexity Low_complexity 1 38 0 203 61 30 0 chr2 212719478 212719511 -40537072 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 1726 182 7 0 chr2 212719852 212720138 -40536445 + AluJb SINE Alu 1 288 -24 207 298 106 43 chr2 212720175 212720269 -40536314 + MER5B DNA MER1_type 1 100 -78 29 0 0 0 chr2 212721412 212721441 -40535142 + AT_rich Low_complexity Low_complexity 1 29 0 1479 169 115 0 chr2 212723388 212723648 -40532935 + AluJo SINE Alu 1 290 -22 989 180 0 0 chr2 212723771 212723932 -40532651 + FRAM SINE Alu 1 161 -15 603 137 0 11 chr2 212724353 212724448 -40532135 - MER8 DNA MER2_type 0 239 146 761 200 172 0 chr2 212724449 212724629 -40531954 + AluJb SINE Alu 89 299 -13 252 231 0 0 chr2 212724629 212724681 -40531902 - MER8 DNA MER2_type -83 156 105 976 112 0 0 chr2 212724706 212724831 -40531752 - AluSq/x SINE Alu -188 125 1 360 230 80 0 chr2 212724831 212724931 -40531652 + HAL1 LINE L1 75 182 -2325 2062 152 7 0 chr2 212725498 212725800 -40530783 + AluSx SINE Alu 1 304 -8 279 79 0 0 chr2 212725821 212725859 -40530724 + (CCCCCA)n Simple_repeat Simple_repeat 5 42 0 288 269 9 28 chr2 212725859 212725967 -40530616 + L1M4 LINE L1 3687 3792 -2354 1946 173 126 7 chr2 212725971 212726395 -40530188 + MLT2B2 LTR ERVL 2 547 -7 755 161 8 16 chr2 212726447 212726571 -40530012 + FRAM SINE Alu 1 116 -60 2249 113 0 7 chr2 212726571 212726871 -40529712 - AluSx SINE Alu -14 298 1 357 205 49 57 chr2 212726872 212726896 -40529687 + MER39 LTR ERV1 587 610 -97 2548 69 0 0 chr2 212726896 212727200 -40529383 - AluY SINE Alu -7 304 1 357 205 49 57 chr2 212727200 212727297 -40529286 + MER39 LTR ERV1 610 707 0 261 258 52 0 chr2 212727297 212727379 -40529204 + MER115 DNA AcHobo 542 628 -65 526 211 191 0 chr2 212727439 212727591 -40528992 - MER58A DNA MER1_type 0 224 44 1591 157 40 0 chr2 212727592 212727712 -40528871 + AluJo SINE Alu 1 115 -197 288 0 0 0 chr2 212727712 212727744 -40528839 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 1591 157 40 0 chr2 212727744 212727872 -40528711 + AluJo SINE Alu 115 259 -53 2515 105 31 3 chr2 212727972 212728324 -40528259 + THE1B LTR MaLR 1 362 -2 11237 85 11 2 chr2 212728326 212729885 -40526698 + THE1B-int LTR MaLR 1 1574 -6 2480 109 28 14 chr2 212729890 212730247 -40526336 + THE1B LTR MaLR 1 362 -2 2502 55 0 0 chr2 212730714 212731006 -40525577 - AluY SINE Alu -17 294 3 2435 91 0 3 chr2 212731391 212731699 -40524884 - AluSx SINE Alu -5 307 1 2133 147 0 3 chr2 212731845 212732158 -40524425 - AluSx SINE Alu 0 312 1 768 241 53 0 chr2 212732410 212732617 -40523966 - LTR33 LTR ERVL -6 515 298 601 159 79 32 chr2 212732836 212732962 -40523621 + LTR32 LTR ERVL 15 146 -325 334 128 13 51 chr2 212733002 212733072 -40523511 + Alu SINE Alu 227 295 -6 2403 100 0 0 chr2 212733072 212733382 -40523201 + AluSg SINE Alu 1 310 0 1900 76 0 4 chr2 212733665 212733901 -40522682 + AluSq SINE Alu 63 297 -16 2027 97 7 11 chr2 212734051 212734330 -40522253 + AluSq SINE Alu 1 278 -35 189 0 0 0 chr2 212734334 212734355 -40522228 + (CAA)n Simple_repeat Simple_repeat 1 21 0 1584 167 10 46 chr2 212734434 212734740 -40521843 - AluJb SINE Alu -17 295 1 2350 62 31 0 chr2 212735260 212735549 -40521034 + AluY SINE Alu 1 298 -13 1117 166 70 10 chr2 212736051 212736250 -40520333 + AluJb SINE Alu 91 301 -11 1733 193 3 10 chr2 212736260 212736560 -40520023 + AluJo SINE Alu 1 298 -14 233 336 86 75 chr2 212736616 212736725 -40519858 + L2 LINE L2 1912 2018 -1296 1778 163 3 38 chr2 212736725 212737044 -40519539 - AluJo SINE Alu -4 308 1 233 336 86 75 chr2 212737044 212737669 -40518914 + L2 LINE L2 2018 2654 -660 297 333 238 5 chr2 212738235 212738445 -40518138 - MIR SINE MIR 0 262 4 22 0 0 0 chr2 212739127 212739149 -40517434 + AT_rich Low_complexity Low_complexity 1 22 0 359 221 32 0 chr2 212739321 212739416 -40517167 + L1M4 LINE L1 2914 3011 -3135 523 257 95 30 chr2 212739432 212739802 -40516781 + L1M4 LINE L1 3110 3503 -2643 256 244 23 23 chr2 212740008 212740094 -40516489 - L1MEc LINE L1 -4610 2528 2443 1812 147 10 35 chr2 212740112 212740424 -40516159 - AluJb SINE Alu -8 304 1 3300 186 37 64 chr2 212740506 212741367 -40515216 - L1MB7 LINE L1 -23 6161 5324 2248 109 0 3 chr2 212741374 212741677 -40514906 - AluSq SINE Alu -11 302 1 1064 248 61 18 chr2 212741699 212742094 -40514489 - L1MEc LINE L1 -5246 1613 1202 1303 216 7 29 chr2 212742207 212742342 -40514241 + AluJo SINE Alu 1 138 -174 2481 80 0 0 chr2 212742342 212742643 -40513940 + AluY SINE Alu 1 301 -10 2116 107 0 4 chr2 212742645 212742980 -40513603 + AluSc SINE Alu 1 334 0 1303 216 7 29 chr2 212742980 212743146 -40513437 + AluJo SINE Alu 139 299 -13 2106 132 3 3 chr2 212743316 212743620 -40512963 - AluSx SINE Alu -8 304 1 1159 220 21 8 chr2 212743761 212743997 -40512586 + AluJb SINE Alu 1 239 -73 2006 124 13 23 chr2 212744168 212744467 -40512116 + AluSx SINE Alu 1 296 -16 515 219 62 67 chr2 212744481 212744691 -40511892 - L1MC4a LINE L1 -1272 6536 6345 * 983 211 139 50 chr2 212744679 212745139 -40511444 - L1ME2 LINE L1 -2 6164 5687 644 196 109 2 chr2 212745134 212745393 -40511190 - L1ME2 LINE L1 -722 5442 5152 * 366 151 0 0 chr2 212745499 212745552 -40511031 + AluJb SINE Alu 234 286 -16 2352 93 3 0 chr2 212746152 212746453 -40510130 - AluSp SINE Alu -7 306 5 1934 146 7 13 chr2 212747057 212747358 -40509225 + AluJb SINE Alu 1 299 -13 2204 87 3 30 chr2 212747853 212748151 -40508432 - AluSp SINE Alu -23 290 1 301 296 45 0 chr2 212749027 212749115 -40507468 + MIR SINE MIR 13 104 -158 375 263 53 47 chr2 212749134 212749305 -40507278 + LTR16B LTR ERVL 293 464 0 2195 98 11 0 chr2 212749600 212749885 -40506698 + AluSq SINE Alu 1 288 -25 2330 103 0 0 chr2 212749910 212750210 -40506373 + AluSg SINE Alu 1 300 -10 986 196 0 5 chr2 212750501 212750690 -40505893 + L1MB7 LINE L1 5920 6107 -77 987 113 0 21 chr2 212750715 212750857 -40505726 + AluJb SINE Alu 1 139 -173 309 98 98 0 chr2 212750858 212750919 -40505664 + Alu SINE Alu 231 297 -3 225 97 0 0 chr2 212750926 212750957 -40505626 + L1MB7 LINE L1 6109 6139 -45 2107 92 0 7 chr2 212751385 212751667 -40504916 + AluSx SINE Alu 1 280 -32 180 0 0 0 chr2 212751670 212751690 -40504893 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1993 119 35 3 chr2 212752281 212752567 -40504016 + AluSq SINE Alu 1 295 -18 24 32 0 0 chr2 212752568 212752599 -40503984 + AT_rich Low_complexity Low_complexity 1 31 0 1611 208 3 3 chr2 212752621 212752929 -40503654 + AluJo SINE Alu 3 310 -2 27 0 0 0 chr2 212753395 212753422 -40503161 + AT_rich Low_complexity Low_complexity 1 27 0 2349 101 0 0 chr2 212753538 212753836 -40502747 + AluSx SINE Alu 4 301 -11 243 0 0 0 chr2 212755513 212755540 -40501043 + (A)n Simple_repeat Simple_repeat 1 27 0 526 246 124 37 chr2 212755545 212755899 -40500684 + L1ME4a LINE L1 5732 6116 -5 1897 90 4 0 chr2 212755907 212756151 -40500432 + AluY SINE Alu 1 245 -66 351 0 0 0 chr2 212756155 212756194 -40500389 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 583 100 0 0 chr2 212757470 212757550 -40499033 - AluSx SINE Alu -10 301 222 726 164 0 16 chr2 212757571 212757693 -40498890 - AluSx SINE Alu -157 155 36 1966 133 7 23 chr2 212757741 212758043 -40498540 + AluSx SINE Alu 1 297 -15 254 152 179 98 chr2 212758135 212758167 -40498416 + L1MB7 LINE L1 5171 5199 -947 1883 177 3 3 chr2 212758167 212758477 -40498106 + AluJb SINE Alu 1 310 -2 254 152 179 98 chr2 212758477 212758556 -40498027 + L1MB7 LINE L1 5199 5291 -855 778 143 0 24 chr2 212758561 212758687 -40497896 + FLAM_A SINE Alu 10 132 -10 4172 157 28 73 chr2 212758698 212759035 -40497548 + L1MB7 LINE L1 5273 5624 -560 2210 123 0 0 chr2 212759035 212759336 -40497247 + AluSx SINE Alu 1 301 -11 4172 157 28 73 chr2 212759336 212759451 -40497132 + L1MB7 LINE L1 5624 5743 -441 1977 153 3 6 chr2 212759451 212759764 -40496819 - AluSx SINE Alu 0 312 1 4172 157 28 73 chr2 212759764 212760244 -40496339 + L1MB7 LINE L1 5743 6164 -20 23 0 0 0 chr2 212760301 212760324 -40496259 + AT_rich Low_complexity Low_complexity 1 23 0 222 143 26 52 chr2 212760595 212760620 -40495963 + (TTAAA)n Simple_repeat Simple_repeat 5 29 -50 975 152 0 12 chr2 212760620 212760784 -40495799 + FAM SINE Alu 1 162 -13 222 143 26 52 chr2 212760784 212760835 -40495748 + (TTAAA)n Simple_repeat Simple_repeat 29 79 0 2092 115 17 0 chr2 212761084 212761371 -40495212 - AluSx SINE Alu -20 292 1 551 300 9 48 chr2 212762147 212762231 -40494352 + MER58A DNA MER1_type 7 93 -2327 1949 141 20 0 chr2 212762231 212762529 -40494054 - AluJb SINE Alu -8 304 1 551 300 9 48 chr2 212762529 212762671 -40493912 + MER58A DNA MER1_type 93 224 0 436 281 96 48 chr2 212763444 212763713 -40492870 - MLT1L LTR MaLR -60 469 251 381 277 0 0 chr2 212763790 212763873 -40492710 - MLT1L LTR MaLR -532 83 1 2152 112 6 13 chr2 212765089 212765401 -40491182 + AluSx SINE Alu 1 310 -2 2052 130 0 0 chr2 212765450 212765749 -40490834 + AluSx SINE Alu 5 303 -9 31 26 0 0 chr2 212765952 212765990 -40490593 + AT_rich Low_complexity Low_complexity 1 38 0 911 129 0 0 chr2 212766087 212766211 -40490372 + FLAM_A SINE Alu 10 133 -9 1253 200 105 58 chr2 212766212 212766592 -40489991 - MER65A LTR ERV1 -47 398 1 577 283 214 49 chr2 212766620 212766688 -40489895 - MLT1H1 LTR MaLR 0 555 500 1152 67 0 7 chr2 212766688 212766838 -40489745 + L1PA7 LINE L1 6005 6153 -1 577 283 214 49 chr2 212766838 212767242 -40489341 - MLT1H1 LTR MaLR -55 500 5 679 244 189 0 chr2 212767345 212767525 -40489058 - MER58A DNA MER1_type -1 223 10 234 0 0 0 chr2 212767915 212767941 -40488642 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 1527 163 35 4 chr2 212768398 212768655 -40487928 - AluJb SINE Alu -47 265 1 189 0 0 0 chr2 212768665 212768686 -40487897 + (T)n Simple_repeat Simple_repeat 1 21 0 2256 83 0 17 chr2 212768755 212769055 -40487528 + AluSx SINE Alu 1 295 -17 249 344 16 25 chr2 212769058 212769180 -40487403 - MLT1-int LTR MaLR -830 541 421 22 0 0 0 chr2 212769737 212769759 -40486824 + AT_rich Low_complexity Low_complexity 1 22 0 1732 165 7 10 chr2 212770675 212770984 -40485599 - AluJo SINE Alu -4 308 1 22 56 0 0 chr2 212771025 212771061 -40485522 + AT_rich Low_complexity Low_complexity 1 36 0 2291 101 3 0 chr2 212771152 212771448 -40485135 + AluSx SINE Alu 1 297 -15 450 0 0 0 chr2 212771457 212771507 -40485076 + (CA)n Simple_repeat Simple_repeat 2 51 0 24 91 0 0 chr2 212772617 212772683 -40483900 + AT_rich Low_complexity Low_complexity 1 66 0 199 363 62 0 chr2 212772995 212773075 -40483508 - MIR SINE MIR -149 113 29 2295 94 0 3 chr2 212773683 212773980 -40482603 - AluSq SINE Alu -14 299 4 2241 135 0 0 chr2 212774257 212774569 -40482014 - AluSx SINE Alu 0 312 1 234 372 132 8 chr2 212774649 212774770 -40481813 - L2 LINE L2 -20 3252 3117 31 0 0 0 chr2 212774789 212774820 -40481763 + AT_rich Low_complexity Low_complexity 1 31 0 21 71 0 0 chr2 212775641 212775683 -40480900 + AT_rich Low_complexity Low_complexity 1 42 0 424 195 0 0 chr2 212775898 212775975 -40480608 - MER58 DNA MER1_type -26 2394 2318 482 210 10 20 chr2 212775987 212776087 -40480496 - MER58 DNA MER1_type -242 99 1 2174 61 61 4 chr2 212776213 212776491 -40480092 + AluY SINE Alu 1 294 -17 3080 166 12 37 chr2 212776807 212777381 -40479202 - MER68 LTR ERV1 0 562 3 32 26 0 0 chr2 212777892 212777931 -40478652 + AT_rich Low_complexity Low_complexity 1 39 0 220 288 17 0 chr2 212777936 212777995 -40478588 + MIR SINE MIR 193 252 -10 647 170 0 0 chr2 212778784 212778884 -40477699 + AluJ/FLAM SINE Alu 1 100 -212 2182 123 0 3 chr2 212778923 212779233 -40477350 + AluSq SINE Alu 1 309 -4 1849 140 26 0 chr2 212779305 212779577 -40477006 - AluJb SINE Alu 0 312 34 1531 162 19 4 chr2 212829772 212830043 -40426540 + AluSx SINE Alu 37 311 -1 2412 66 0 7 chr2 212830188 212830491 -40426092 + AluY SINE Alu 1 301 -10 1020 138 98 40 chr2 212831906 212832051 -40424532 + MER33 DNA MER1_type 2 137 -2448 2018 121 19 51 chr2 212832051 212832364 -40424219 + AluSx SINE Alu 1 303 -9 1020 138 98 40 chr2 212832364 212832494 -40424089 + MER33 DNA MER1_type 137 293 -31 700 195 63 18 chr2 212832498 212832719 -40423864 - MER20B DNA MER1_type -50 733 503 2166 117 3 3 chr2 212833226 212833525 -40423058 + AluSx SINE Alu 1 299 -13 2066 137 0 22 chr2 212834408 212834721 -40421862 + AluJb SINE Alu 1 306 -6 219 285 97 21 chr2 212834872 212834989 -40421594 + MIR SINE MIR 25 151 -111 456 19 0 0 chr2 212835140 212835193 -40421390 + (CCA)n Simple_repeat Simple_repeat 1 53 0 278 26 26 0 chr2 212835193 212835232 -40421351 + (CAA)n Simple_repeat Simple_repeat 3 42 0 1759 116 48 65 chr2 212835937 212836231 -40420352 - AluSx SINE Alu -23 289 1 25 23 0 23 chr2 212838294 212838325 -40418258 + AT_rich Low_complexity Low_complexity 1 32 -10 333 0 0 0 chr2 212838325 212838362 -40418221 + (CA)n Simple_repeat Simple_repeat 2 38 0 25 23 0 23 chr2 212838362 212838373 -40418210 + AT_rich Low_complexity Low_complexity 32 42 0 219 310 0 26 chr2 212839637 212839750 -40416833 + CT-rich Low_complexity Low_complexity 1 110 0 2631 99 67 7 chr2 212840500 212840904 -40415679 - MSTA LTR MaLR 0 428 1 3514 192 45 62 chr2 212841419 212842411 -40414172 - L1ME1 LINE L1 0 6166 5200 2162 90 7 0 chr2 212842411 212842690 -40413893 - AluSq SINE Alu -32 281 1 3514 192 45 62 chr2 212842690 212842889 -40413694 - L1ME1 LINE L1 -966 5200 4999 2076 149 7 3 chr2 212842955 212843264 -40413319 - AluSx SINE Alu -2 310 1 426 236 94 0 chr2 212843940 212844067 -40412516 + LTR33 LTR ERVL 1 139 -382 486 280 16 28 chr2 212844077 212844259 -40412324 + CT-rich Low_complexity Low_complexity 1 180 0 21 0 0 0 chr2 212844708 212844729 -40411854 + AT_rich Low_complexity Low_complexity 1 21 0 2238 119 0 0 chr2 212844916 212845210 -40411373 - AluSx SINE Alu -18 294 1 21 0 0 0 chr2 212846158 212846179 -40410404 + AT_rich Low_complexity Low_complexity 1 21 0 182 339 253 16 chr2 212846253 212846439 -40410144 - L3 LINE CR1 -77 1500 1271 217 291 14 43 chr2 212846462 212846612 -40409971 - MIR SINE MIR -62 200 20 2232 117 0 13 chr2 212846612 212846928 -40409655 - AluSx SINE Alu 0 312 1 254 114 0 0 chr2 212847398 212847433 -40409150 - AluSq SINE Alu -136 167 133 2166 114 0 0 chr2 212847433 212847734 -40408849 - AluSx SINE Alu 0 301 1 969 189 0 0 chr2 212848278 212848437 -40408146 + AluJb SINE Alu 136 294 -18 1487 138 5 0 chr2 212849564 212849781 -40406802 - AluSx SINE Alu -37 275 58 384 127 0 0 chr2 212850045 212850100 -40406483 - AluSx SINE Alu -245 55 1 2383 88 0 0 chr2 212851041 212851338 -40405245 - AluSq SINE Alu -16 297 1 2801 13 0 0 chr2 212851705 212852013 -40404570 - AluYb8 SINE Alu -10 308 1 214 405 0 0 chr2 212852410 212852494 -40404089 + L2 LINE L2 2408 2491 -823 400 356 55 14 chr2 212852568 212852787 -40403796 - MIR SINE MIR -26 236 9 345 348 125 22 chr2 212852855 212853168 -40403415 + L2 LINE L2 2850 3194 -78 205 316 18 0 chr2 212853352 212853409 -40403174 - L2 LINE L2 -15 3257 3200 184 226 16 65 chr2 212853561 212853623 -40402960 + L2 LINE L2 3214 3272 0 26 64 0 0 chr2 212853823 212853870 -40402713 + AT_rich Low_complexity Low_complexity 1 47 0 535 212 0 20 chr2 212855107 212855206 -40401377 + L2 LINE L2 3190 3286 -27 304 271 47 39 chr2 212856642 212856771 -40399812 - MARNA DNA Mariner -168 418 289 2039 130 7 0 chr2 212856977 212857277 -40399306 - AluSx SINE Alu -10 302 1 199 333 125 0 chr2 212857494 212857566 -40399017 + L2 LINE L2 3188 3268 -4 240 277 199 12 chr2 212857653 212857819 -40398764 + MIR SINE MIR 64 260 -2 2541 59 3 0 chr2 212858213 212858518 -40398065 + AluY SINE Alu 3 308 -3 1981 134 16 0 chr2 212859164 212859470 -40397113 - AluSx SINE Alu -1 311 1 307 185 0 0 chr2 212860548 212860602 -40395981 + MER5B DNA MER1_type 1 54 -124 345 208 92 42 chr2 212860604 212860724 -40395859 + L1MEc LINE L1 29 154 -6242 736 271 115 34 chr2 212860758 212861118 -40395465 + L1MEc LINE L1 933 1262 -5134 1792 246 74 32 chr2 212861118 212861687 -40394896 - MLT1E LTR MaLR 0 593 1 736 271 115 34 chr2 212861687 212861978 -40394605 + L1MEc LINE L1 1262 1637 -4759 2105 68 43 7 chr2 212861981 212862261 -40394322 - AluY SINE Alu -10 301 12 2182 72 0 31 chr2 212862261 212862551 -40394032 - AluY SINE Alu -30 281 1 1731 108 15 11 chr2 212862765 212863033 -40393550 + AluSp SINE Alu 23 291 -22 381 351 40 14 chr2 212863053 212863201 -40393382 - MIR SINE MIR -107 155 4 2475 71 0 0 chr2 212863432 212863727 -40392856 - AluY SINE Alu -16 295 1 294 302 103 33 chr2 212863802 212864044 -40392539 - L2 LINE L2 -190 3082 2824 697 204 133 4 chr2 212864296 212864521 -40392062 - Charlie2 DNA MER1_type -743 2119 1866 254 250 272 27 chr2 212864533 212864717 -40391866 - Charlie2 DNA MER1_type -2461 321 93 2197 103 3 7 chr2 212864719 212865019 -40391564 + AluSc SINE Alu 1 299 -10 1602 126 37 58 chr2 212865045 212865339 -40391244 + AluJo SINE Alu 12 299 -13 272 295 118 34 chr2 212865410 212865647 -40390936 - L2 LINE L2 -699 2615 2359 210 300 100 25 chr2 212866320 212866400 -40390183 - L2 LINE L2 -41 3231 3146 2152 91 11 0 chr2 212866468 212866755 -40389828 - AluSg SINE Alu -20 290 1 1800 153 3 18 chr2 212867451 212867733 -40388850 - AluJb SINE Alu -34 278 1 983 148 72 86 chr2 212867918 212868127 -40388456 - AluJb SINE Alu -22 290 85 1910 122 76 3 chr2 212868248 212868536 -40388047 - AluSx SINE Alu -3 309 1 2301 90 10 3 chr2 212868773 212869072 -40387511 + AluSq SINE Alu 1 301 -12 22 0 0 0 chr2 212869817 212869839 -40386744 + AT_rich Low_complexity Low_complexity 1 22 0 2361 88 7 0 chr2 212872511 212872805 -40383778 + AluSc SINE Alu 1 296 -13 25 31 0 0 chr2 212874721 212874753 -40381830 + AT_rich Low_complexity Low_complexity 1 32 0 2445 75 0 10 chr2 212876307 212876614 -40379969 - AluY SINE Alu -7 304 1 255 93 0 0 chr2 212877073 212877116 -40379467 + (TA)n Simple_repeat Simple_repeat 2 44 0 899 125 0 22 chr2 212878284 212878420 -40378163 + FLAM_C SINE Alu 1 133 0 275 244 0 11 chr2 212882260 212882350 -40374233 + (CATATA)n Simple_repeat Simple_repeat 2 90 0 209 250 0 15 chr2 212883376 212883444 -40373139 + G-rich Low_complexity Low_complexity 3 69 0 339 327 120 69 chr2 212883496 212883946 -40372637 - L1M2 LINE L1 -5931 918 446 213 204 0 0 chr2 212884053 212884097 -40372486 + G-rich Low_complexity Low_complexity 5 48 0 180 214 0 0 chr2 212884274 212884330 -40372253 + G-rich Low_complexity Low_complexity 2 57 0 34 42 0 0 chr2 212886383 212886431 -40370152 + AT_rich Low_complexity Low_complexity 1 48 0 1383 119 29 112 chr2 212886828 212887105 -40369478 + AluJo SINE Alu 11 264 -48 213 39 0 0 chr2 212887105 212887131 -40369452 + (GGGAGA)n Simple_repeat Simple_repeat 1 26 0 334 133 20 51 chr2 212887143 212887241 -40369342 + GA-rich Low_complexity Low_complexity 2 96 0 196 180 0 33 chr2 212887231 212887271 -40369312 + A-rich Low_complexity Low_complexity 4 43 -19 * 2152 123 7 3 chr2 212887271 212887579 -40369004 + AluSc SINE Alu 1 309 0 196 180 0 33 chr2 212887579 212887599 -40368984 + A-rich Low_complexity Low_complexity 43 62 0 502 136 74 0 chr2 212888778 212888859 -40367724 + FRAM SINE Alu 41 127 -49 2556 142 161 123 chr2 212889111 212889572 -40367011 - L1MC3 LINE L1 -94 7691 7249 244 299 39 0 chr2 212889572 212889649 -40366934 - MLT1F1 LTR MaLR -453 114 35 2556 142 161 123 chr2 212889649 212890345 -40366238 - L1MC3 LINE L1 -536 7249 6718 1473 176 34 61 chr2 212889874 212890170 -40366413 - AluJo SINE Alu -24 288 1 1250 159 31 195 chr2 212890170 212890504 -40366079 - L1MC4a LINE L1 -828 6980 6593 24 0 0 0 chr2 212890818 212890842 -40365741 + AT_rich Low_complexity Low_complexity 1 24 0 2298 120 0 0 chr2 212892861 212893169 -40363414 + AluSg SINE Alu 1 308 -2 293 217 130 33 chr2 212893669 212893761 -40362822 - L2 LINE L2 0 3313 3213 733 284 32 40 chr2 212894325 212894575 -40362008 - MIR SINE MIR -12 250 3 816 267 67 40 chr2 212894892 212895266 -40361317 + MLT1L LTR MaLR 113 496 -119 980 180 53 18 chr2 212895348 212895576 -40361007 + MER34 LTR ERV1 27 262 -280 388 180 56 0 chr2 212895645 212895734 -40360849 + MER34 LTR ERV1 445 538 -4 824 191 114 27 chr2 212895766 212895797 -40360786 - Charlie1 DNA MER1_type -2522 239 212 1538 159 101 0 chr2 212895797 212896082 -40360501 + AluSx SINE Alu 1 311 0 824 191 114 27 chr2 212896082 212896269 -40360314 - Charlie1 DNA MER1_type -2549 212 1 1999 160 3 3 chr2 212896381 212896693 -40359890 + AluJb SINE Alu 1 312 0 372 239 73 18 chr2 212898057 212898166 -40358417 + MIR SINE MIR 126 240 -22 2031 131 20 3 chr2 212898849 212899154 -40357429 + AluSx SINE Alu 1 310 -2 26 0 0 0 chr2 212899948 212899974 -40356609 + AT_rich Low_complexity Low_complexity 1 26 0 243 0 0 0 chr2 212900293 212900320 -40356263 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1959 122 11 4 chr2 212900322 212900601 -40355982 - AluSg1 SINE Alu -28 281 1 2174 100 30 0 chr2 212901207 212901508 -40355075 + AluSg SINE Alu 1 310 0 1108 199 78 39 chr2 212901537 212901868 -40354715 + MER2 DNA MER2_type 1 344 0 2203 82 7 0 chr2 212901871 212902150 -40354433 - AluY SINE Alu -1 310 30 1160 66 0 0 chr2 212902150 212902286 -40354297 - AluY SINE Alu -175 136 1 201 74 0 0 chr2 212902859 212902886 -40353697 + (CAG)n Simple_repeat Simple_repeat 1 27 0 442 316 38 0 chr2 212903263 212903396 -40353187 - MIR3 SINE MIR -38 170 33 348 185 82 116 chr2 212903450 212903596 -40352987 - L1M4 LINE L1 -3162 2984 2844 2080 96 4 11 chr2 212903952 212904233 -40352350 + AluSc SINE Alu 1 279 -30 183 42 0 0 chr2 212904238 212904262 -40352321 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 2054 137 3 7 chr2 212906036 212906343 -40350240 + AluSx SINE Alu 1 306 -6 2249 98 3 10 chr2 212907392 212907688 -40348895 - AluSx SINE Alu -18 294 1 4410 158 33 12 chr2 212907807 212908723 -40347860 + L1MC1 LINE L1 5186 6115 -218 1747 159 32 3 chr2 212908723 212909006 -40347577 + AluSg SINE Alu 1 291 -19 234 204 19 0 chr2 212910371 212910425 -40346158 - MER8 DNA MER2_type -62 177 123 1239 97 0 46 chr2 212910426 212910601 -40345982 + AluSx SINE Alu 1 167 -145 2275 107 10 0 chr2 212910861 212911161 -40345422 - AluSx SINE Alu -9 303 1 207 0 0 0 chr2 212911375 212911398 -40345185 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 2449 74 0 0 chr2 212911577 212911873 -40344710 - AluY SINE Alu -15 296 1 24 0 0 0 chr2 212912178 212912202 -40344381 + AT_rich Low_complexity Low_complexity 1 24 0 198 324 0 29 chr2 212912596 212912664 -40343919 + MIR SINE MIR 17 82 -180 5738 211 76 30 chr2 212912668 212913487 -40343096 + L1ME LINE L1 1499 2279 -4147 1907 134 63 0 chr2 212913487 212913771 -40342812 + AluSx SINE Alu 1 302 -10 2462 73 0 10 chr2 212913771 212914085 -40342498 + AluY SINE Alu 1 311 0 5738 211 76 30 chr2 212914085 212915253 -40341330 + L1ME LINE L1 2279 3392 -3034 2109 143 0 6 chr2 212915253 212915567 -40341016 + AluSx SINE Alu 1 312 0 5738 211 76 30 chr2 212915567 212915584 -40340999 + L1ME LINE L1 3392 3407 -3019 1727 181 13 17 chr2 212915584 212915882 -40340701 + AluJo SINE Alu 1 297 -15 5738 211 76 30 chr2 212915882 212916693 -40339890 + L1ME LINE L1 3407 4446 -1980 1661 192 0 14 chr2 212917065 212917362 -40339221 + AluJb SINE Alu 1 293 -19 2234 113 3 0 chr2 212917366 212917666 -40338917 + AluSq SINE Alu 2 302 -11 269 243 199 48 chr2 212917729 212917935 -40338648 + L1ME LINE L1 5720 5956 -488 2346 104 0 0 chr2 212918075 212918373 -40338210 - AluSx SINE Alu -14 298 1 26 30 0 0 chr2 212918390 212918423 -40338160 + AT_rich Low_complexity Low_complexity 1 33 0 28 29 0 0 chr2 212918647 212918682 -40337901 + AT_rich Low_complexity Low_complexity 1 35 0 1443 210 45 58 chr2 212919430 212919639 -40336944 + L1MCa LINE L1 4770 4980 -1446 2337 105 20 0 chr2 212919639 212919945 -40336638 + AluSx SINE Alu 1 312 0 1443 210 45 58 chr2 212919945 212920131 -40336452 + L1MCa LINE L1 4980 5159 -1267 2438 71 0 0 chr2 212920131 212920427 -40336156 + AluY SINE Alu 1 296 -15 1443 210 45 58 chr2 212920427 212920567 -40336016 + L1MCa LINE L1 5159 5299 -1127 22 0 0 0 chr2 212920670 212920692 -40335891 + AT_rich Low_complexity Low_complexity 1 22 0 466 275 46 8 chr2 212920692 212920823 -40335760 - MER8 DNA MER2_type -103 136 1 1908 129 0 31 chr2 212920839 212921133 -40335450 - AluJb SINE Alu -18 294 10 573 174 41 0 chr2 212921174 212921272 -40335311 + L2 LINE L2 3212 3313 0 604 291 147 45 chr2 212921285 212921790 -40334793 + L2 LINE L2 2740 3305 -8 1886 131 8 4 chr2 212924430 212924697 -40331886 + AluSq SINE Alu 30 297 -16 2246 114 3 0 chr2 212925196 212925503 -40331080 - AluSx SINE Alu -4 308 1 22 35 0 0 chr2 212925761 212925790 -40330793 + AT_rich Low_complexity Low_complexity 1 29 0 1035 149 7 0 chr2 212926213 212926367 -40330216 + FRAM SINE Alu 2 156 -20 22 56 0 0 chr2 212926724 212926760 -40329823 + AT_rich Low_complexity Low_complexity 1 36 0 336 335 137 33 chr2 212926943 212927250 -40329333 - L2 LINE L2 -1 3271 2933 1174 261 58 29 chr2 212927262 212927744 -40328839 + MER20B DNA MER1_type 1 496 -287 2004 150 0 0 chr2 212927900 212928194 -40328389 + AluSx SINE Alu 1 294 -18 2356 92 3 0 chr2 212928197 212928501 -40328082 + AluY SINE Alu 1 305 -6 2057 98 66 0 chr2 212928551 212928837 -40327746 - AluSq SINE Alu -8 305 1 285 176 14 0 chr2 212928954 212929028 -40327555 + L1MA7 LINE L1 6205 6279 -12 23 33 0 0 chr2 212929191 212929221 -40327362 + AT_rich Low_complexity Low_complexity 1 30 0 1264 193 62 77 chr2 212929287 212929484 -40327099 - L1ME2 LINE L1 -99 6065 5866 1474 129 0 36 chr2 212929484 212929708 -40326875 - AluSg/x SINE Alu -11 301 86 1264 193 62 77 chr2 212929708 212929797 -40326786 - L1ME2 LINE L1 -298 5866 5777 2195 98 17 7 chr2 212929797 212930093 -40326490 + AluSx SINE Alu 1 299 -13 1264 193 62 77 chr2 212930093 212930260 -40326323 - L1ME2 LINE L1 -387 5777 5618 319 237 72 22 chr2 212930395 212930410 -40326173 - L1MA9 LINE L1 0 6312 6298 1725 214 161 31 chr2 212930410 212931257 -40325326 - L1ME2 LINE L1 -11 6153 5196 2231 95 3 3 chr2 212931257 212931553 -40325030 - AluSc SINE Alu -11 298 3 243 103 0 0 chr2 212931673 212931712 -40324871 + (TG)n Simple_repeat Simple_repeat 1 39 0 1139 149 25 21 chr2 212931784 212932019 -40324564 + Charlie4 DNA MER1_type 39 274 -1687 2051 131 0 7 chr2 212932020 212932317 -40324266 + AluSg SINE Alu 1 295 -15 501 259 59 91 chr2 212932473 212932813 -40323770 - MLT1J2 LTR MaLR -121 329 1 2307 75 0 0 chr2 212932943 212933236 -40323347 - AluSg SINE Alu -17 293 1 1896 170 0 0 chr2 212933881 212934203 -40322380 + AluJb SINE Alu 1 312 0 21 0 0 0 chr2 212934337 212934358 -40322225 + AT_rich Low_complexity Low_complexity 1 21 0 1878 125 0 4 chr2 212934462 212934726 -40321857 - AluSx SINE Alu -9 303 41 1810 145 29 4 chr2 212935583 212935859 -40320724 + AluJo SINE Alu 21 303 -9 2323 101 0 3 chr2 212935999 212936306 -40320277 - AluSc SINE Alu -3 306 1 2134 120 10 3 chr2 212936451 212936742 -40319841 - AluSx SINE Alu -19 293 1 875 137 8 0 chr2 212937134 212937258 -40319325 + FLAM_C SINE Alu 2 126 -17 2783 43 23 3 chr2 212937267 212937614 -40318969 - L1PA7 LINE L1 -2 6152 5799 2202 117 0 16 chr2 212937663 212937800 -40318783 + AluSq SINE Alu 1 139 -174 2319 101 3 13 chr2 212937800 212938116 -40318467 + AluSq SINE Alu 1 313 0 1313 122 0 0 chr2 212938105 212938294 -40318289 + AluSq SINE Alu 123 311 -2 2202 117 0 16 chr2 212938116 212938294 -40318289 + AluSq SINE Alu 139 311 -2 930 203 25 0 chr2 212938304 212938462 -40318121 + AluJo/FRAM SINE Alu 139 300 -2 2376 99 0 0 chr2 212938557 212938860 -40317723 + AluSg SINE Alu 1 303 -7 338 253 98 109 chr2 212939017 212939420 -40317163 - MLT1J LTR MaLR -4 507 196 1148 143 0 11 chr2 212940358 212940540 -40316043 - AluSg1 SINE Alu -10 300 121 189 0 0 0 chr2 212940776 212940797 -40315786 + (TA)n Simple_repeat Simple_repeat 1 21 0 291 54 0 0 chr2 212940797 212940834 -40315749 + (CA)n Simple_repeat Simple_repeat 2 38 0 32 75 0 0 chr2 212941877 212941944 -40314639 + AT_rich Low_complexity Low_complexity 1 67 0 2584 46 7 0 chr2 212942039 212942343 -40314240 - AluY SINE Alu -5 306 1 1033 98 0 0 chr2 212942345 212942477 -40314106 - AluSg1 SINE Alu -177 132 1 357 312 121 53 chr2 212942484 212942560 -40314023 - L3b LINE CR1 -63 1520 1451 1961 135 47 0 chr2 212942560 212942857 -40313726 + AluSx SINE Alu 1 311 -1 357 312 121 53 chr2 212942857 212943136 -40313447 - L3b LINE CR1 -132 1451 1141 2436 98 0 0 chr2 212943424 212943731 -40312852 + AluSg SINE Alu 1 307 -3 272 224 120 104 chr2 212944089 212944281 -40312302 - MLT1K LTR MaLR -4 584 390 307 136 0 30 chr2 212944385 212944451 -40312132 + (GGA)n Simple_repeat Simple_repeat 2 65 0 242 269 0 0 chr2 212944455 212944533 -40312050 + GA-rich Low_complexity Low_complexity 3 80 0 2404 201 18 28 chr2 212944960 212945158 -40311425 + MLT1D LTR MaLR 13 211 -294 2313 81 7 0 chr2 212945158 212945442 -40311141 + AluSg SINE Alu 11 296 -14 2404 201 18 28 chr2 212945442 212945741 -40310842 + MLT1D LTR MaLR 211 505 0 221 413 22 0 chr2 212945949 212946087 -40310496 - L2 LINE L2 -674 2640 2500 2396 78 3 19 chr2 212946506 212946815 -40309768 + AluSp SINE Alu 1 304 -9 245 256 86 94 chr2 212947134 212947158 -40309425 - L2 LINE L2 -8 3264 3241 2402 144 10 38 chr2 212947158 212947555 -40309028 + MLT1B LTR MaLR 1 386 -4 245 256 86 94 chr2 212947555 212947647 -40308936 - L2 LINE L2 -31 3241 3149 240 304 0 0 chr2 212947651 212947730 -40308853 + L2 LINE L2 2282 2360 -954 210 349 0 0 chr2 212947778 212947844 -40308739 + L2 LINE L2 3205 3270 -2 2139 42 0 63 chr2 212947874 212948159 -40308424 - AluY SINE Alu -44 267 1 2280 79 17 3 chr2 212948362 212948653 -40307930 + AluSq SINE Alu 2 296 -17 492 355 84 32 chr2 212948699 212949043 -40307540 - L2 LINE L2 -13 3259 2898 2023 129 3 10 chr2 212949518 212949820 -40306763 - AluSx SINE Alu -12 300 1 2425 74 0 3 chr2 212950298 212950607 -40305976 + AluY SINE Alu 1 308 -3 21 36 0 0 chr2 212950618 212950646 -40305937 + AT_rich Low_complexity Low_complexity 1 28 0 2345 120 0 0 chr2 212950930 212951239 -40305344 - AluSx SINE Alu -3 309 1 2156 125 3 3 chr2 212951243 212951548 -40305035 - AluSc SINE Alu -4 305 1 467 246 9 21 chr2 212951638 212951761 -40304822 - L1P4 LINE L1 -525 5596 5490 2227 102 0 3 chr2 212951896 212952179 -40304404 + AluSc SINE Alu 3 284 -25 2375 86 0 0 chr2 212952187 212952491 -40304092 + AluY SINE Alu 6 309 -2 2113 142 0 0 chr2 212952569 212952871 -40303712 + AluSx SINE Alu 1 302 -10 2391 52 0 11 chr2 212953302 212953613 -40302970 + AluY SINE Alu 1 308 0 407 258 33 25 chr2 212953980 212954100 -40302483 + MIR SINE MIR 20 140 -68 368 258 33 17 chr2 212954182 212954302 -40302281 - MER103 DNA DNA -1 165 44 316 306 88 71 chr2 212954465 212954759 -40301824 + L2 LINE L2 2371 2669 -645 2497 103 42 25 chr2 212954951 212955309 -40301274 + THE1B LTR MaLR 1 364 0 314 333 37 0 chr2 212955363 212955471 -40301112 + L2 LINE L2 2942 3053 -219 185 333 158 33 chr2 212955510 212955630 -40300953 + L2 LINE L2 3138 3272 0 2247 111 3 0 chr2 212955778 212956076 -40300507 - AluSq SINE Alu -14 299 1 3233 61 3 0 chr2 212956500 212956892 -40299691 - L1PA5 LINE L1 -1 6153 5761 378 0 0 0 chr2 212958363 212958405 -40298178 + (CAGT)n Simple_repeat Simple_repeat 1 42 0 326 293 106 92 chr2 212958415 212958961 -40297622 - L1M2 LINE L1 -6047 802 249 205 152 0 0 chr2 212959138 212959171 -40297412 + G-rich Low_complexity Low_complexity 1 33 0 205 188 203 16 chr2 212959593 212959657 -40296926 - L2 LINE L2 -8 3264 3189 426 292 56 28 chr2 212959701 212959879 -40296704 + MIR SINE MIR 64 246 -16 304 247 55 14 chr2 212960812 212960885 -40295698 + MIR3 SINE MIR 85 160 -48 719 271 126 5 chr2 212960989 212961203 -40295380 - MIR SINE MIR -21 241 2 3475 150 85 77 chr2 212961241 212961398 -40295185 - L1MB4 LINE L1 -8 6172 6018 293 141 188 0 chr2 212961398 212961462 -40295121 + AluJ/FRAM SINE Alu 217 292 -10 3475 150 85 77 chr2 212961462 212962250 -40294333 - L1MB4 LINE L1 -162 6018 5155 1209 89 0 0 chr2 212962250 212962407 -40294176 - L1PA6 LINE L1 -5 6149 5993 3475 150 85 77 chr2 212962407 212962698 -40293885 - L1MB4 LINE L1 -1025 5155 4868 220 244 0 0 chr2 212962710 212962755 -40293828 + (TA)n Simple_repeat Simple_repeat 2 46 0 2327 111 0 0 chr2 212962756 212963053 -40293530 - AluSx SINE Alu -15 297 1 2318 102 0 3 chr2 212964000 212964304 -40292279 + AluSp SINE Alu 1 303 -10 1570 144 156 8 chr2 212964389 212964652 -40291931 + AluJb SINE Alu 1 302 0 243 0 0 0 chr2 212964656 212964683 -40291900 + (TA)n Simple_repeat Simple_repeat 2 28 0 1154 238 67 21 chr2 212964974 212965673 -40290910 - Charlie7 DNA MER1_type -284 2328 1515 636 199 75 50 chr2 212965792 212965836 -40290747 - Charlie7 DNA MER1_type -1311 1301 1260 2417 85 0 3 chr2 212965836 212966142 -40290441 - AluSp SINE Alu -7 306 2 636 199 75 50 chr2 212966142 212966258 -40290325 - Charlie7 DNA MER1_type -1352 1260 1137 346 260 61 100 chr2 212966320 212966551 -40290032 - Charlie7 DNA MER1_type -2389 223 2 2340 84 3 26 chr2 212966576 212966887 -40289696 + AluSp SINE Alu 1 304 -9 719 272 49 16 chr2 212966887 212967133 -40289450 + L1ME4a LINE L1 5660 5913 -208 333 0 0 0 chr2 212967287 212967324 -40289259 + (GA)n Simple_repeat Simple_repeat 2 38 0 2357 89 26 0 chr2 212967626 212967929 -40288654 - AluSp SINE Alu -2 311 1 252 215 19 84 chr2 212967933 212968040 -40288543 - L1ME LINE L1 -460 5661 5562 1529 148 14 47 chr2 212968331 212968608 -40287975 + MLT1D LTR MaLR 9 276 -229 1981 93 0 62 chr2 212968609 212968930 -40287653 + AluSx SINE Alu 1 301 -11 568 73 0 37 chr2 212969164 212969246 -40287337 - AluSx SINE Alu -1 310 232 1100 133 0 0 chr2 212969247 212969397 -40287186 - AluSx SINE Alu -154 158 9 2228 107 0 10 chr2 212969422 212969722 -40286861 - AluSc SINE Alu -12 297 1 304 154 169 0 chr2 212969971 212970036 -40286547 + MLT1K LTR MaLR 511 586 -2 660 110 0 11 chr2 212970647 212970738 -40285845 - FLAM SINE Alu -16 127 38 465 163 12 12 chr2 212970739 212970825 -40285758 - L1MB7 LINE L1 -46 6138 6053 267 191 0 0 chr2 212970922 212970969 -40285614 + Charlie8 DNA MER1_type 2368 2414 -3 1161 126 0 0 chr2 212971191 212971350 -40285233 - AluSg/x SINE Alu -5 305 147 2976 112 31 7 chr2 212971464 212971882 -40284701 - MSTA LTR MaLR 0 428 1 1961 139 41 0 chr2 212972191 212972485 -40284098 + AluSx SINE Alu 1 306 -6 201 260 0 0 chr2 212972821 212972871 -40283712 + CT-rich Low_complexity Low_complexity 2 51 0 576 185 90 12 chr2 212972880 212973070 -40283513 - MER8 DNA MER2_type -2 237 1 232 163 0 0 chr2 212973070 212973113 -40283470 - L1MC4 LINE L1 -14 8028 7986 1307 77 12 6 chr2 212973119 212973287 -40283296 + AluSp SINE Alu 1 169 -144 2239 90 0 34 chr2 212973301 212973622 -40282961 - AluY SINE Alu -1 310 1 2747 181 145 76 chr2 212973623 212974356 -40282227 - L1MC4 LINE L1 -204 7838 7157 2324 94 0 3 chr2 212974356 212974653 -40281930 + AluSq SINE Alu 1 296 -17 1038 92 0 0 chr2 212974653 212974827 -40281756 + (TA)n Simple_repeat Simple_repeat 2 175 0 2747 181 145 76 chr2 212974827 212975005 -40281578 - L1MC4 LINE L1 -884 7158 6863 669 65 0 22 chr2 212975010 212975102 -40281481 - AluY SINE Alu -7 304 215 546 199 199 67 chr2 212975102 212975369 -40281214 - L1MC4a LINE L1 -1021 6787 6571 183 156 0 0 chr2 212975691 212975723 -40280860 + (TG)n Simple_repeat Simple_repeat 2 33 0 544 216 0 10 chr2 212975731 212975833 -40280750 - MLT1C LTR MaLR -2 465 365 2842 82 6 0 chr2 212976022 212976375 -40280208 + THE1A LTR MaLR 1 355 0 12033 87 3 5 chr2 212976375 212977948 -40278635 + THE1A-int LTR MaLR 1 1571 -9 2419 75 102 0 chr2 212977950 212978272 -40278311 + THE1A LTR MaLR 1 355 0 2146 88 14 14 chr2 212978381 212978692 -40277891 - AluSx SINE Alu 0 311 1 2197 58 4 0 chr2 212978716 212978977 -40277606 - AluY SINE Alu -12 299 38 540 115 11 11 chr2 212979581 212979668 -40276915 + AluJb SINE Alu 158 244 -68 180 125 0 0 chr2 212979706 212979738 -40276845 + (T)n Simple_repeat Simple_repeat 1 32 0 857 154 0 8 chr2 212979939 212980069 -40276514 - FLAM_C SINE Alu -4 129 1 206 232 18 18 chr2 212980293 212980349 -40276234 + CT-rich Low_complexity Low_complexity 3 58 0 259 307 80 40 chr2 212980887 212981063 -40275520 - MER5A DNA MER1_type -6 183 1 559 360 117 20 chr2 212981068 212981482 -40275101 + L2 LINE L2 2765 3225 -47 2076 102 42 0 chr2 212981829 212982114 -40274469 - AluSq SINE Alu -16 297 1 1776 148 145 0 chr2 212982420 212982724 -40273859 - MER7A DNA MER2_type 0 346 1 258 179 64 51 chr2 212983040 212983118 -40273465 + MIR SINE MIR 108 186 -76 1069 254 56 56 chr2 212984200 212984559 -40272024 - MLT1A1 LTR MaLR -6 359 1 2131 116 3 3 chr2 212985176 212985478 -40271105 - AluSq SINE Alu -11 302 1 2581 58 0 6 chr2 212986714 212987027 -40269556 - AluY SINE Alu 0 311 1 237 207 121 17 chr2 212987147 212987205 -40269378 + MER94 DNA DNA 2 65 -69 2246 116 6 3 chr2 212987552 212987863 -40268720 - AluSx SINE Alu 0 312 1 300 136 0 2 chr2 212988728 212988781 -40267802 + Alu SINE Alu 254 299 -3 2175 112 3 0 chr2 212989300 212989596 -40266987 - AluSx SINE Alu -10 302 6 1784 157 46 0 chr2 212989746 212990026 -40266557 + AluSx SINE Alu 1 293 -19 2364 96 3 6 chr2 212990481 212990793 -40265790 - AluSq SINE Alu -2 311 1 27 0 0 0 chr2 212992020 212992047 -40264536 + AT_rich Low_complexity Low_complexity 1 27 0 2270 93 3 34 chr2 212992390 212992711 -40263872 - AluSq SINE Alu -2 311 1 384 330 43 32 chr2 212992733 212992918 -40263665 + MIR SINE MIR 2 188 -74 2339 76 26 7 chr2 212992935 212993239 -40263344 - AluSg SINE Alu 0 310 1 2309 78 10 16 chr2 212993869 212994175 -40262408 + AluSx SINE Alu 1 304 -8 956 287 78 35 chr2 212994887 212995423 -40261160 - HAL1 LINE L1 -41 2466 1908 183 129 0 0 chr2 212995429 212995460 -40261123 + (T)n Simple_repeat Simple_repeat 1 31 0 474 232 92 73 chr2 212995474 212995638 -40260945 - HAL1 LINE L1 -1804 703 537 1219 180 28 28 chr2 212995642 212995859 -40260724 - MER20 DNA MER1_type 0 219 3 2225 103 0 26 chr2 212996123 212996433 -40260150 - AluSx SINE Alu -10 302 1 660 249 111 23 chr2 212996768 212996985 -40259598 - HAL1 LINE L1 -2109 398 163 824 168 136 11 chr2 212997026 212997217 -40259366 + MER20 DNA MER1_type 2 216 -3 367 169 0 15 chr2 212997275 212997340 -40259243 + HsTC2 DNA Tc2 1230 1293 -605 344 222 25 12 chr2 212997362 212997443 -40259140 + L2 LINE L2 2243 2324 -990 2994 175 30 15 chr2 212997455 212997987 -40258596 - MLT2B3 LTR ERVL -14 540 1 1938 256 98 7 chr2 212997987 212998703 -40257880 + L2 LINE L2 2322 3092 -221 866 225 0 0 chr2 212998712 212998901 -40257682 - AluSg/x SINE Alu 0 317 129 2044 105 11 4 chr2 212999071 212999371 -40257212 + AluSx SINE Alu 6 307 0 2128 113 0 33 chr2 212999650 212999951 -40256632 + AluSx SINE Alu 1 291 -21 246 62 0 0 chr2 212999951 212999983 -40256600 + (TA)n Simple_repeat Simple_repeat 2 33 0 349 259 119 21 chr2 213000114 213000257 -40256326 - MIR SINE MIR -17 245 89 21 0 0 0 chr2 213000455 213000476 -40256107 + AT_rich Low_complexity Low_complexity 1 21 0 623 297 70 11 chr2 213000565 213000750 -40255833 - MIR SINE MIR -64 198 3 1948 146 7 3 chr2 213000976 213001285 -40255298 - AluSx SINE Alu -2 310 1 2049 123 7 13 chr2 213001928 213002230 -40254353 - AluSx SINE Alu -12 300 1 624 239 84 0 chr2 213002331 213002544 -40254039 - L1MC4 LINE L1 -3 8039 7809 198 253 157 12 chr2 213002679 213002762 -40253821 - L2 LINE L2 0 3313 3219 702 143 0 9 chr2 213002764 213002869 -40253714 + AluSq/x SINE Alu 2 105 -208 601 270 139 56 chr2 213003058 213003432 -40253151 + MLT1J2 LTR MaLR 42 446 0 2178 106 7 0 chr2 213003487 213003780 -40252803 - AluSg SINE Alu -15 295 1 1876 149 0 44 chr2 213003807 213004122 -40252461 - AluJo SINE Alu -11 301 1 477 315 49 80 chr2 213004873 213005159 -40251424 - L2 LINE L2 -31 3241 2965 405 0 0 0 chr2 213005159 213005204 -40251379 + (TG)n Simple_repeat Simple_repeat 2 46 0 1017 225 59 36 chr2 213005263 213005516 -40251067 + MIR SINE MIR 2 260 -2 298 82 0 61 chr2 213005642 213005691 -40250892 - MSTC LTR MaLR -382 46 1 1925 146 4 0 chr2 213005865 213006169 -40250414 + AluSx SINE Alu 1 305 0 1707 109 19 4 chr2 213007017 213007273 -40249310 - L1MA5A LINE L1 -4 6293 6034 382 346 15 7 chr2 213007792 213007928 -40248655 + MIR SINE MIR 16 152 -56 2445 52 10 10 chr2 213008936 213009244 -40247339 - AluY SINE Alu -3 308 1 564 249 137 10 chr2 213010695 213010892 -40245691 - MIR SINE MIR -6 256 35 181 280 260 20 chr2 213010991 213011091 -40245492 - MIR SINE MIR -86 176 53 1826 106 0 4 chr2 213011729 213011975 -40244608 - AluSx SINE Alu -54 258 14 315 260 39 0 chr2 213012280 213012357 -40244226 - L2 LINE L2 -11 3302 3223 279 219 0 29 chr2 213012580 213012685 -40243898 + CT-rich Low_complexity Low_complexity 1 102 0 29 28 0 0 chr2 213012972 213013008 -40243575 + AT_rich Low_complexity Low_complexity 1 36 0 2108 88 0 69 chr2 213013138 213013456 -40243127 + AluY SINE Alu 2 297 -14 395 258 86 94 chr2 213013481 213013583 -40243000 - MARNA DNA Mariner -262 324 223 1588 152 83 7 chr2 213013583 213013872 -40242711 + AluSx SINE Alu 1 311 -1 395 258 86 94 chr2 213013872 213014002 -40242581 - MARNA DNA Mariner -363 223 94 2298 105 3 6 chr2 213014331 213014645 -40241938 - AluSq SINE Alu 0 313 1 2049 123 6 25 chr2 213014948 213015266 -40241317 - AluSx SINE Alu 0 312 1 1970 126 7 7 chr2 213015302 213015630 -40240953 + AluSx SINE Alu 1 312 0 180 0 0 0 chr2 213016340 213016360 -40240223 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 2270 116 0 0 chr2 213016447 213016771 -40239812 + AluSx SINE Alu 1 312 0 190 333 61 30 chr2 213017676 213017775 -40238808 - L2 LINE L2 -33 3280 3179 250 328 176 14 chr2 213017944 213018450 -40238133 - L2 LINE L2 -881 2433 1846 1908 116 18 4 chr2 213018600 213018877 -40237706 + AluSg SINE Alu 2 282 -28 414 0 0 0 chr2 213018877 213018923 -40237660 + (CA)n Simple_repeat Simple_repeat 2 47 0 3115 72 14 36 chr2 213019228 213019646 -40236937 - L1PA8A LINE L1 0 6131 5723 604 204 15 38 chr2 213019811 213019943 -40236640 - FLAM_A SINE Alu -3 139 11 23 54 0 0 chr2 213020312 213020349 -40236234 + AT_rich Low_complexity Low_complexity 1 37 0 214 286 13 65 chr2 213020588 213020665 -40235918 - L2 LINE L2 0 3272 3200 3523 129 72 4 chr2 213021838 213022395 -40234188 - LTR49 LTR ERV1 0 595 1 2145 129 3 0 chr2 213022581 213022884 -40233699 + AluSq SINE Alu 1 304 -9 2376 90 0 10 chr2 213023996 213024307 -40232276 - AluSc SINE Alu -1 308 1 656 235 145 23 chr2 213025395 213025616 -40230967 + MIR SINE MIR 15 262 0 249 299 11 46 chr2 213026364 213026451 -40230132 - L2 LINE L2 0 3313 3230 758 164 0 0 chr2 213026452 213026568 -40230015 - FRAM SINE Alu -7 169 54 1972 138 28 0 chr2 213026631 213026922 -40229661 - AluSx SINE Alu -13 299 1 772 242 85 18 chr2 213027065 213027288 -40229295 + MIR SINE MIR 15 252 -10 21 0 0 0 chr2 213027417 213027438 -40229145 + AT_rich Low_complexity Low_complexity 1 21 0 414 265 38 38 chr2 213028878 213029010 -40227573 - MIR SINE MIR -21 241 110 385 316 90 40 chr2 213029017 213029194 -40227389 + MIR3 SINE MIR 2 187 -21 444 77 0 0 chr2 213029267 213029332 -40227251 + (CA)n Simple_repeat Simple_repeat 2 66 0 2119 98 30 14 chr2 213029449 213029745 -40226838 + AluY SINE Alu 1 301 -10 1881 120 35 14 chr2 213029954 213030238 -40226345 + AluSx SINE Alu 1 290 -22 847 158 70 13 chr2 213030245 213030403 -40226180 + AluSg/x SINE Alu 126 292 -20 2145 106 0 3 chr2 213030479 213030772 -40225811 - AluY SINE Alu -19 292 1 1892 138 14 0 chr2 213030774 213031064 -40225519 - AluSq SINE Alu -15 298 5 2187 113 7 0 chr2 213031343 213031643 -40224940 - AluSx SINE Alu -10 302 1 248 247 144 21 chr2 213031762 213031859 -40224724 + L2 LINE L2 3200 3308 -5 1818 163 0 13 chr2 213032014 213032314 -40224269 + AluJb SINE Alu 14 309 -3 2568 151 22 93 chr2 213032717 213033035 -40223548 - L1MB7 LINE L1 0 6184 5920 1963 147 0 27 chr2 213033035 213033328 -40223255 + AluSx SINE Alu 3 287 -25 2568 151 22 93 chr2 213033328 213033560 -40223023 - L1MB7 LINE L1 -264 5920 5673 2039 150 3 0 chr2 213034258 213034584 -40221999 - AluSx SINE Alu 0 312 1 476 291 77 61 chr2 213034912 213035225 -40221358 + MLT1K LTR MaLR 128 445 -143 2255 84 13 10 chr2 213035252 213035562 -40221021 - AluY SINE Alu 0 311 1 26 0 0 0 chr2 213035815 213035841 -40220742 + AT_rich Low_complexity Low_complexity 1 26 0 260 243 39 39 chr2 213036069 213036172 -40220411 + MLT1K LTR MaLR 483 585 -3 1581 203 0 19 chr2 213036291 213036602 -40219981 - AluJo SINE Alu -6 306 2 489 314 72 69 chr2 213037113 213037233 -40219350 + L3 LINE CR1 791 909 -668 685 142 19 0 chr2 213037233 213037339 -40219244 + L1MC1 LINE L1 6226 6333 0 489 314 72 69 chr2 213037339 213037623 -40218960 + L3 LINE CR1 909 1196 -381 311 313 16 53 chr2 213037705 213037906 -40218677 - MIR SINE MIR -50 212 20 316 301 151 41 chr2 213037912 213038131 -40218452 + L3 LINE CR1 1286 1528 -49 2657 52 0 0 chr2 213038795 213039102 -40217481 - AluY SINE Alu -4 307 1 336 95 48 16 chr2 213039489 213039552 -40217031 + MER115 DNA AcHobo 600 664 -29 2381 99 0 3 chr2 213040249 213040551 -40216032 - AluSx SINE Alu -11 301 1 353 349 14 5 chr2 213041138 213041383 -40215200 + AluSc SINE Alu 80 326 0 250 364 95 25 chr2 213041383 213041595 -40214988 - L2 LINE L2 -1668 1646 1450 2004 127 10 3 chr2 213041595 213041895 -40214688 - AluSq SINE Alu -11 302 1 250 364 95 25 chr2 213041895 213042113 -40214470 - L2 LINE L2 -1864 1450 1186 335 279 79 28 chr2 213042628 213042708 -40213875 + L2 LINE L2 1797 1871 -1443 2061 126 7 0 chr2 213042708 213043001 -40213582 + AluSx SINE Alu 1 295 -17 335 279 79 28 chr2 213043001 213043135 -40213448 + L2 LINE L2 1871 2022 -1292 1356 290 46 17 chr2 213043252 213043762 -40212821 + MER115 DNA AcHobo 45 616 -77 981 157 11 6 chr2 213043875 213044053 -40212530 - L1MB3 LINE L1 0 6183 6005 672 157 182 0 chr2 213044060 213044181 -40212402 + FRAM SINE Alu 7 149 -27 204 40 0 0 chr2 213044181 213044206 -40212377 + (CA)n Simple_repeat Simple_repeat 2 26 0 1371 146 29 36 chr2 213044211 213044486 -40212097 - L1MB3 LINE L1 -171 6012 5740 1515 96 195 20 chr2 213044913 213045164 -40211419 - AluSg1 SINE Alu -14 295 1 740 292 37 4 chr2 213045983 213046226 -40210357 + MIR SINE MIR 2 252 -10 2403 88 0 0 chr2 213046829 213047125 -40209458 + AluSc SINE Alu 1 296 -13 1691 181 7 7 chr2 213047849 213048157 -40208426 - AluSx SINE Alu 0 308 1 1100 40 0 0 chr2 213048483 213048608 -40207975 - AluY SINE Alu -116 195 71 6520 111 205 88 chr2 213048608 213050126 -40206457 + pTR5 LTR ERV1 743 2438 0 512 96 0 0 chr2 213050129 213050202 -40206381 - AluY SINE Alu -237 74 2 6735 108 40 11 chr2 213050258 213050878 -40205705 + L1MA2 LINE L1 5024 5624 -680 2425 66 3 31 chr2 213050878 213051196 -40205387 + AluY SINE Alu 1 309 -2 6735 108 40 11 chr2 213051196 213051824 -40204759 + L1MA2 LINE L1 5624 6304 0 277 159 0 23 chr2 213051846 213051890 -40204693 + Alu SINE Alu 1 43 -257 2282 108 0 3 chr2 213052479 213052784 -40203799 + AluSg1 SINE Alu 1 304 -5 1391 160 4 4 chr2 213053509 213053734 -40202849 + AluJo SINE Alu 1 225 -87 462 30 0 15 chr2 213053808 213053874 -40202709 + AluY SINE Alu 240 304 -8 2293 71 10 3 chr2 213054111 213054405 -40202178 + AluY SINE Alu 1 296 -15 391 279 41 28 chr2 213054665 213054847 -40201736 + MIR SINE MIR 73 258 -4 592 289 65 24 chr2 213054854 213055100 -40201483 + MIR SINE MIR 4 259 -3 2280 106 3 10 chr2 213055545 213055856 -40200727 + AluSx SINE Alu 1 309 -3 2335 97 10 0 chr2 213056134 213056434 -40200149 - AluSp SINE Alu -10 303 1 578 254 15 40 chr2 213056441 213056642 -40199941 - MIR SINE MIR -65 197 2 2160 111 14 0 chr2 213056971 213057268 -40199315 - AluSq SINE Alu -12 301 1 243 0 0 0 chr2 213058636 213058663 -40197920 + (TA)n Simple_repeat Simple_repeat 2 28 0 474 256 98 6 chr2 213058727 213058891 -40197692 - MIR SINE MIR -38 224 46 227 114 23 0 chr2 213059450 213059494 -40197089 + (TA)n Simple_repeat Simple_repeat 1 45 0 463 242 120 51 chr2 213059616 213060005 -40196578 + L1MC4a LINE L1 5710 6121 0 21 0 0 0 chr2 213060057 213060078 -40196505 + AT_rich Low_complexity Low_complexity 1 21 0 1371 219 141 58 chr2 213060214 213061208 -40195375 + LTR28 LTR ERV1 1 635 -1 2015 38 144 0 chr2 213061654 213061917 -40194666 - AluY SINE Alu 0 301 1 1865 135 14 14 chr2 213062378 213062675 -40193908 - AluSg SINE Alu -13 297 1 2530 73 0 6 chr2 213063047 213063362 -40193221 - AluSp SINE Alu 0 313 1 734 154 8 24 chr2 213063526 213063649 -40192934 + FLAM_A SINE Alu 1 121 -12 188 309 37 37 chr2 213063777 213063858 -40192725 + MIR SINE MIR 34 114 -148 2166 159 6 0 chr2 213064131 213064477 -40192106 + MER7A DNA MER2_type 1 346 0 2504 46 0 40 chr2 213064583 213064906 -40191677 + AluY SINE Alu 1 310 -1 307 211 0 101 chr2 213065873 213065982 -40190601 + MER103 DNA DNA 7 104 -62 1785 136 8 4 chr2 213066082 213066346 -40190237 - AluSp SINE Alu -12 301 37 291 270 61 9 chr2 213066445 213066560 -40190023 - L1ME4a LINE L1 -41 6080 5960 2150 87 21 7 chr2 213066594 213066881 -40189702 - AluSc SINE Alu -18 291 1 198 0 0 0 chr2 213067667 213067689 -40188894 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 1954 133 11 0 chr2 213067692 213067970 -40188613 - AluSx SINE Alu -31 281 1 1092 160 16 0 chr2 213068341 213068529 -40188054 - L1PA10 LINE L1 -5 6163 5973 2286 113 3 0 chr2 213069017 213069328 -40187255 + AluSx SINE Alu 1 312 0 2129 84 22 0 chr2 213069521 213069828 -40186755 + AluSc SINE Alu 1 313 0 287 164 66 0 chr2 213069867 213069928 -40186655 - Alu SINE Alu 0 300 236 1796 99 11 29 chr2 213069928 213070201 -40186382 - AluSg SINE Alu -37 273 6 421 230 100 0 chr2 213070211 213070311 -40186272 - MIR SINE MIR -110 152 43 182 185 0 74 chr2 213070576 213070630 -40185953 + L2 LINE L2 3223 3272 0 1946 112 7 27 chr2 213070735 213071031 -40185552 + AluSg SINE Alu 2 291 -19 1865 183 51 46 chr2 213071728 213071872 -40184711 + MLT1C LTR MaLR 34 176 -291 2352 73 7 0 chr2 213071872 213072159 -40184424 + AluSg SINE Alu 1 289 -21 1865 183 51 46 chr2 213072159 213072446 -40184137 + MLT1C LTR MaLR 176 467 0 361 299 103 43 chr2 213072478 213072712 -40183871 - L2 LINE L2 -6 3266 3019 2097 86 72 0 chr2 213072719 213072998 -40183585 - AluSp SINE Alu -14 299 1 580 269 109 47 chr2 213073490 213073543 -40183040 - L1ME4a LINE L1 -38 6083 6035 2302 53 46 0 chr2 213073543 213073827 -40182756 + AluY SINE Alu 1 297 -14 580 269 109 47 chr2 213073827 213074111 -40182472 - L1ME4a LINE L1 -86 6035 5725 1506 169 34 130 chr2 213074759 213075173 -40181410 - MLT1A2 LTR MaLR 0 374 1 852 223 38 68 chr2 213075599 213075622 -40180961 + MER46C DNA MER2_type 82 104 -234 1530 238 70 41 chr2 213075622 213076109 -40180474 - MLT1D LTR MaLR 0 505 5 852 223 38 68 chr2 213076109 213076257 -40180326 + MER46C DNA MER2_type 104 245 -93 2171 108 7 7 chr2 213076257 213076554 -40180029 - AluSx SINE Alu -15 297 1 852 223 38 68 chr2 213076554 213076646 -40179937 + MER46C DNA MER2_type 245 338 0 286 292 79 0 chr2 213077211 213077300 -40179283 + MIR SINE MIR 129 224 -38 2358 53 17 3 chr2 213077412 213077711 -40178872 - AluY SINE Alu -8 303 1 2140 122 10 0 chr2 213077711 213078014 -40178569 - AluSx SINE Alu -6 306 1 206 326 127 28 chr2 213078472 213078653 -40177930 + L2 LINE L2 237 435 -2879 2107 139 3 10 chr2 213078789 213079099 -40177484 + AluSq SINE Alu 1 308 -5 2313 96 13 0 chr2 213079104 213079406 -40177177 + AluSp SINE Alu 1 306 -7 2300 79 17 3 chr2 213079924 213080215 -40176368 - AluSq SINE Alu -17 296 2 2392 57 0 74 chr2 213080418 213080754 -40175829 + AluY SINE Alu 1 311 0 254 298 40 16 chr2 213080765 213080889 -40175694 - L1ME4a LINE L1 -38 6083 5957 1745 142 40 4 chr2 213081511 213081818 -40174765 + AluSx SINE Alu 1 317 0 21 0 0 0 chr2 213081928 213081949 -40174634 + AT_rich Low_complexity Low_complexity 1 21 0 697 191 0 0 chr2 213083204 213083330 -40173253 - FRAM SINE Alu -13 163 38 1177 160 5 44 chr2 213083395 213083601 -40172982 + AluJb SINE Alu 3 200 -112 289 245 0 96 chr2 213083618 213083712 -40172871 - Charlie8 DNA MER1_type -2325 92 8 22 0 0 0 chr2 213084200 213084222 -40172361 + AT_rich Low_complexity Low_complexity 1 22 0 224 358 33 8 chr2 213084673 213084793 -40171790 - L2 LINE L2 -476 2838 2716 610 316 60 0 chr2 213084946 213085180 -40171403 - MIR SINE MIR 0 262 15 2073 120 0 3 chr2 213085810 213086120 -40170463 - AluSx SINE Alu 0 309 1 22 0 0 0 chr2 213086242 213086264 -40170319 + AT_rich Low_complexity Low_complexity 1 22 0 2175 113 3 3 chr2 213086976 213087268 -40169315 - AluSx SINE Alu -20 292 1 227 204 0 0 chr2 213087574 213087623 -40168960 + T-rich Low_complexity Low_complexity 2 50 0 2204 119 0 6 chr2 213088000 213088311 -40168272 + AluSx SINE Alu 1 309 -3 214 239 14 28 chr2 213088565 213088636 -40167947 + CT-rich Low_complexity Low_complexity 3 72 0 307 80 0 0 chr2 213088688 213088736 -40167847 - MLT2B3 LTR ERVL 0 554 350 270 136 0 0 chr2 213088737 213088781 -40167802 + (TATG)n Simple_repeat Simple_repeat 3 46 0 208 121 86 0 chr2 213088800 213088858 -40167725 + (TA)n Simple_repeat Simple_repeat 1 63 0 2670 40 0 0 chr2 213089507 213089833 -40166750 + AluY SINE Alu 1 326 0 235 165 44 60 chr2 213091467 213091949 -40164634 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 385 171 51 28 chr2 213091533 213091544 -40165039 + (TA)n Simple_repeat Simple_repeat 1 10 -170 208 0 0 0 chr2 213091544 213091567 -40165016 + (TTTA)n Simple_repeat Simple_repeat 2 92 0 2082 115 4 0 chr2 213091567 213091846 -40164737 - AluSg SINE Alu -1 302 1 385 171 51 28 chr2 213091846 213092009 -40164574 + (TA)n Simple_repeat Simple_repeat 9 180 0 1298 176 127 21 chr2 213092020 213092304 -40164279 - MLT2B3 LTR ERVL -20 534 221 328 248 255 0 chr2 213092413 213092562 -40164021 + MIR SINE MIR 53 239 -23 492 260 150 22 chr2 213093014 213093241 -40163342 + L3b LINE CR1 1105 1360 -223 2257 98 20 0 chr2 213093928 213094225 -40162358 - AluSg SINE Alu -7 303 1 1764 117 3 91 chr2 213094226 213094534 -40162049 - AluSx SINE Alu -31 281 1 667 201 75 35 chr2 213094787 213094986 -40161597 + L1ME3 LINE L1 5955 6161 -1 2200 71 4 0 chr2 213095246 213095512 -40161071 - AluY SINE Alu -12 299 33 2034 132 30 0 chr2 213095780 213096083 -40160500 + AluSx SINE Alu 1 312 0 2269 103 3 0 chr2 213096356 213096658 -40159925 + AluY SINE Alu 1 303 -8 1618 274 99 30 chr2 213097045 213097813 -40158770 - L2 LINE L2 -5 3308 2470 2315 104 3 0 chr2 213097813 213098112 -40158471 + AluSx SINE Alu 1 300 -12 1618 274 99 30 chr2 213098112 213098158 -40158425 - L2 LINE L2 -843 2470 2429 223 331 58 43 chr2 213098754 213098893 -40157690 - L2 LINE L2 0 3272 3132 397 283 145 77 chr2 213098925 213099381 -40157202 + MLT1H LTR MaLR 1 487 -62 997 153 0 0 chr2 213099383 213099533 -40157050 - AluJb SINE Alu -26 286 137 263 141 42 113 chr2 213099533 213099604 -40156979 + MLT1H LTR MaLR 484 549 0 278 315 114 43 chr2 213099625 213099669 -40156914 + L2 LINE L2 2813 2852 -420 2125 113 3 7 chr2 213099669 213099970 -40156613 - AluSq SINE Alu -13 300 1 278 315 114 43 chr2 213099970 213100179 -40156404 + L2 LINE L2 2852 3084 -188 2366 90 3 0 chr2 213100212 213100511 -40156072 - AluSx SINE Alu -12 300 1 2354 86 13 0 chr2 213101140 213101443 -40155140 + AluSg SINE Alu 1 307 -3 1870 122 7 15 chr2 213101443 213101713 -40154870 + AluSx SINE Alu 36 304 -8 1824 173 0 3 chr2 213102966 213103261 -40153322 - AluJo SINE Alu -18 294 1 25 0 0 0 chr2 213103427 213103452 -40153131 + AT_rich Low_complexity Low_complexity 1 25 0 243 0 0 0 chr2 213104106 213104133 -40152450 + (T)n Simple_repeat Simple_repeat 1 27 0 2007 123 3 7 chr2 213104475 213104799 -40151784 + AluSx SINE Alu 1 323 0 244 179 0 54 chr2 213105517 213105573 -40151010 - L2 LINE L2 0 3313 3261 497 367 53 0 chr2 213105782 213105951 -40150632 + MIR SINE MIR 15 192 -70 2211 108 3 0 chr2 213105999 213106294 -40150289 - AluSx SINE Alu -16 296 1 613 230 158 0 chr2 213106337 213106489 -40150094 - MER5A DNA MER1_type -3 186 11 792 186 5 139 chr2 213106505 213106639 -40149944 - MER5A DNA MER1_type -3 186 90 2448 85 3 35 chr2 213106639 213106874 -40149709 - L1PA8A LINE L1 -1 6130 5908 2166 124 3 0 chr2 213106874 213107172 -40149411 - AluSx SINE Alu -13 299 1 2448 85 3 35 chr2 213107172 213107276 -40149307 - L1PA8A LINE L1 -223 5908 5802 792 186 5 139 chr2 213107276 213107356 -40149227 - MER5A DNA MER1_type -99 90 1 2215 106 0 0 chr2 213107612 213107922 -40148661 - AluSx SINE Alu 0 310 1 2086 120 0 7 chr2 213108263 213108555 -40148028 + AluSg SINE Alu 1 290 -20 234 0 0 0 chr2 213108555 213108581 -40148002 + (TA)n Simple_repeat Simple_repeat 2 27 0 1487 184 3 62 chr2 213109070 213109390 -40147193 + AluJo SINE Alu 1 301 -11 2558 48 3 10 chr2 213109390 213109701 -40146882 + AluY SINE Alu 1 309 -2 3731 77 0 0 chr2 213110465 213110909 -40145674 + MLT2A1 LTR ERVL 1 444 0 278 250 59 40 chr2 213110914 213111066 -40145517 - L1MEd LINE L1 -3859 2270 2116 2168 116 0 0 chr2 213111233 213111526 -40145057 + AluSq SINE Alu 1 293 -20 1749 207 86 55 chr2 213111724 213112237 -40144346 - L1ME3A LINE L1 -24 6146 5618 274 88 0 0 chr2 213112245 213112279 -40144304 - L1M1 LINE L1 -748 5556 5523 422 317 46 57 chr2 213112299 213112645 -40143938 - L1MEd LINE L1 -5397 722 381 982 174 68 63 chr2 213112645 213112783 -40143800 + MER3 DNA MER1_type 2 144 -65 2052 118 21 4 chr2 213112783 213113097 -40143486 - AluSx SINE Alu 0 319 1 982 174 68 63 chr2 213113097 213113164 -40143419 + MER3 DNA MER1_type 144 209 0 422 317 46 57 chr2 213113164 213113275 -40143308 - L1MEd LINE L1 -5738 381 270 470 291 80 80 chr2 213113497 213113777 -40142806 + L2 LINE L2 1855 2137 -1177 2340 101 0 3 chr2 213113777 213114084 -40142499 - AluSg SINE Alu -4 306 1 470 291 80 80 chr2 213114084 213114192 -40142391 + L2 LINE L2 2136 2243 -1071 812 105 32 0 chr2 213114966 213115090 -40141493 - L1MA8 LINE L1 -8 6283 6156 348 127 0 0 chr2 213115422 213115477 -40141106 + (T)n Simple_repeat Simple_repeat 1 55 0 383 163 20 7 chr2 213115481 213115568 -40141015 - LTR30 LTR ERV1 -99 677 556 618 122 18 195 chr2 213115569 213115797 -40140786 - LTR12 LTR ERV1 -445 1516 100 228 250 0 0 chr2 213115801 213115853 -40140730 - LTR30 LTR ERV1 -670 52 1 523 291 27 29 chr2 213117055 213117294 -40139289 - L2 LINE L2 -5 3267 2989 211 262 28 84 chr2 213117490 213117597 -40138986 + L2 LINE L2 3111 3211 -61 416 325 19 32 chr2 213117736 213117890 -40138693 - L2 LINE L2 0 3272 3121 214 171 0 0 chr2 213119067 213119108 -40137475 + GA-rich Low_complexity Low_complexity 3 43 0 2458 92 0 6 chr2 213119111 213119425 -40137158 + AluSx SINE Alu 1 312 0 547 231 83 52 chr2 213119576 213119805 -40136778 + MER106A DNA MER1_type 1 236 0 2228 99 0 20 chr2 213120089 213120393 -40136190 - AluSg SINE Alu -12 298 1 921 289 227 13 chr2 213120774 213121306 -40135277 - L2 LINE L2 -2086 1228 583 182 331 96 7 chr2 213121363 213121499 -40135084 - L2 LINE L2 -222 3050 2903 1577 167 40 30 chr2 213121655 213121955 -40134628 - AluJo SINE Alu -9 303 1 2470 70 3 0 chr2 213122255 213122554 -40134029 - AluSp SINE Alu -13 300 1 1435 265 90 31 chr2 213122885 213123372 -40133211 - LTR33 LTR ERVL -4 517 2 2351 98 7 0 chr2 213123378 213123685 -40132898 - AluSc SINE Alu 0 309 1 2085 149 0 0 chr2 213124064 213124359 -40132224 - AluSx SINE Alu -17 295 1 679 254 32 43 chr2 213124773 213124958 -40131625 - MIR SINE MIR -63 199 17 185 318 0 0 chr2 213124969 213125013 -40131570 - L2 LINE L2 -112 3160 3117 243 0 0 0 chr2 213125417 213125444 -40131139 + (TG)n Simple_repeat Simple_repeat 1 27 0 293 261 33 43 chr2 213126649 213126741 -40129842 + MLT1J LTR MaLR 1 91 -420 * 561 270 37 18 chr2 213126737 213126900 -40129683 + MLT1J LTR MaLR 315 480 -31 421 214 86 21 chr2 213127087 213127264 -40129319 - MLT1J LTR MaLR -67 444 167 208 290 140 10 chr2 213128175 213128275 -40128308 + L2 LINE L2 3201 3313 0 530 306 82 60 chr2 213128722 213128841 -40127742 - L2 LINE L2 0 3272 3157 2165 130 0 3 chr2 213128841 213129142 -40127441 + AluSx SINE Alu 1 300 -12 530 306 82 60 chr2 213129142 213129437 -40127146 - L2 LINE L2 -115 3157 2849 243 103 0 0 chr2 213129946 213129985 -40126598 + (TG)n Simple_repeat Simple_repeat 1 39 0 2140 146 84 47 chr2 213130040 213130292 -40126291 + Charlie4a DNA MER1_type 1 242 -1719 2288 80 14 0 chr2 213130292 213130581 -40126002 + AluY SINE Alu 1 293 -18 2140 146 84 47 chr2 213130581 213130813 -40125770 + Charlie4a DNA MER1_type 242 503 -5 1756 118 42 0 chr2 213131597 213131922 -40124661 + L1P4 LINE L1 5200 5541 -624 180 220 121 33 chr2 213132164 213132255 -40124328 + MIR SINE MIR 124 222 -40 318 321 0 9 chr2 213132919 213133028 -40123555 - MER117 DNA MER1_type -86 111 4 313 284 139 78 chr2 213133100 213133435 -40123148 + L2 LINE L2 2749 3114 -158 2390 82 3 3 chr2 213135239 213135543 -40121040 - AluY SINE Alu -7 304 1 695 301 41 0 chr2 213136032 213136251 -40120332 + MIR SINE MIR 32 259 -3 230 302 122 14 chr2 213137135 213137274 -40119309 - MIR SINE MIR -96 166 13 401 235 98 38 chr2 213137714 213137846 -40118737 - L2 LINE L2 -1 3312 3173 180 0 0 0 chr2 213137966 213137986 -40118597 + (TG)n Simple_repeat Simple_repeat 2 21 0 203 363 81 8 chr2 213137993 213138117 -40118466 - L2 LINE L2 -254 3059 2927 2191 127 28 28 chr2 213138537 213138564 -40118019 - L1PB4 LINE L1 -12 6144 6118 2449 77 3 0 chr2 213138564 213138862 -40117721 - AluSp SINE Alu -14 299 1 2191 127 28 28 chr2 213138862 213139197 -40117386 - L1PB4 LINE L1 -37 6119 5782 278 121 103 0 chr2 213139201 213139259 -40117324 - L1P4 LINE L1 -321 5845 5782 237 65 0 0 chr2 213139301 213139332 -40117251 + (TG)n Simple_repeat Simple_repeat 2 32 0 2952 122 13 4 chr2 213139354 213139806 -40116777 - L1P4 LINE L1 -365 5791 5336 16202 100 8 9 chr2 213139806 213141236 -40115347 + L1PA8 LINE L1 1925 3354 -2792 2476 74 0 0 chr2 213141236 213141533 -40115050 + AluY SINE Alu 1 297 -14 16202 100 8 9 chr2 213141533 213142420 -40114163 + L1PA8 LINE L1 3354 4240 -1906 2727 42 7 96 chr2 213142467 213142813 -40113770 + L1PA8 LINE L1 5444 5746 -426 2389 103 0 0 chr2 213142813 213143115 -40113468 + AluSp SINE Alu 1 302 -11 2727 42 7 96 chr2 213143115 213143196 -40113387 + L1PA8 LINE L1 5746 5833 -339 7938 86 10 0 chr2 213143196 213145114 -40111469 + L1PA8 LINE L1 4241 6172 0 3263 189 19 1 chr2 213145119 213145850 -40110733 - L1 LINE L1 -795 5351 4608 404 211 77 0 chr2 213145867 213145971 -40110612 + MIR SINE MIR 103 214 -48 326 317 0 0 chr2 213146263 213146345 -40110238 + MIR3 SINE MIR 81 162 -46 292 229 0 0 chr2 213146411 213146472 -40110111 - L3b LINE CR1 -305 1278 1218 443 210 84 6 chr2 213146981 213147148 -40109435 + L1ME4a LINE L1 5690 5869 -252 306 250 88 7 chr2 213147227 213147363 -40109220 + L1ME4a LINE L1 5975 6121 0 195 222 0 0 chr2 213148039 213148084 -40108499 + CT-rich Low_complexity Low_complexity 1 45 0 1125 80 17 6 chr2 213148085 213148260 -40108323 + (TTTC)n Simple_repeat Simple_repeat 2 178 0 1850 155 30 3 chr2 213148279 213148583 -40108000 - AluSx SINE Alu 0 312 1 180 0 0 0 chr2 213149283 213149303 -40107280 + (TTA)n Simple_repeat Simple_repeat 2 21 0 843 138 0 0 chr2 213149310 213149426 -40107157 - FLAM_C SINE Alu -27 116 1 201 74 0 0 chr2 213149449 213149476 -40107107 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 607 271 33 17 chr2 213149515 213149696 -40106887 + MIR SINE MIR 31 214 -48 509 333 12 0 chr2 213149935 213150097 -40106486 - MIR SINE MIR -93 169 6 1810 121 71 7 chr2 213151128 213151408 -40105175 + AluSx SINE Alu 1 298 -14 237 214 0 0 chr2 213151566 213151608 -40104975 + (TG)n Simple_repeat Simple_repeat 1 42 0 2229 136 0 0 chr2 213154193 213154503 -40102080 + AluSx SINE Alu 1 310 -2 514 293 108 56 chr2 213154725 213154957 -40101626 + L2 LINE L2 3028 3271 -1 884 206 85 48 chr2 213155100 213155348 -40101235 - MIR SINE MIR -5 257 1 405 39 0 0 chr2 213156118 213156169 -40100414 + (GA)n Simple_repeat Simple_repeat 1 51 0 180 0 0 0 chr2 213156168 213156188 -40100395 + (TG)n Simple_repeat Simple_repeat 2 21 0 * 316 244 0 26 chr2 213156866 213156944 -40099639 + MIR3 SINE MIR 108 183 -25 21 57 0 0 chr2 213157431 213157466 -40099117 + AT_rich Low_complexity Low_complexity 1 35 0 195 342 9 18 chr2 213157896 213158010 -40098573 + L2 LINE L2 2206 2318 -996 215 345 71 0 chr2 213158142 213158255 -40098328 + L2 LINE L2 2545 2665 -649 1809 152 0 52 chr2 213159117 213159426 -40097157 - AluJo SINE Alu -19 293 1 429 266 81 42 chr2 213159628 213159887 -40096696 + LTR33 LTR ERVL 253 521 0 320 229 0 0 chr2 213159893 213159954 -40096629 - MER2 DNA MER2_type -1 344 284 * 461 264 209 0 chr2 213159931 213160079 -40096504 - MER8 DNA MER2_type -60 179 1 332 223 39 85 chr2 213161468 213161598 -40094985 + MIR3 SINE MIR 60 183 -25 358 360 29 7 chr2 213161810 213161949 -40094634 + MIR3 SINE MIR 4 145 -63 210 373 8 34 chr2 213163567 213163685 -40092898 + L2 LINE L2 2714 2828 -486 247 285 146 48 chr2 213163925 213164090 -40092493 + L2 LINE L2 3004 3184 -88 575 219 89 41 chr2 213165228 213165397 -40091186 - MER5B DNA MER1_type 0 178 2 4495 159 37 26 chr2 213165446 213165528 -40091055 + L1MB7 LINE L1 5182 5262 -922 1777 137 11 0 chr2 213165528 213165791 -40090792 + AluSx SINE Alu 44 309 -3 4495 159 37 26 chr2 213165791 213166696 -40089887 + L1MB7 LINE L1 5262 6182 -2 322 215 0 46 chr2 213166727 213166792 -40089791 + MER5B DNA MER1_type 69 130 -48 818 136 0 16 chr2 213166840 213166965 -40089618 - FLAM_C SINE Alu -20 123 1 2306 88 7 3 chr2 213167288 213167593 -40088990 + AluSp SINE Alu 1 306 -7 200 329 85 37 chr2 213167669 213167751 -40088832 + MIR SINE MIR 37 122 -140 182 419 14 0 chr2 213167793 213167867 -40088716 - L2 LINE L2 -49 3223 3149 2130 141 0 7 chr2 213168205 213168510 -40088073 + AluSx SINE Alu 1 303 -9 357 24 0 0 chr2 213169709 213169751 -40086832 + (TTCC)n Simple_repeat Simple_repeat 3 44 0 2346 75 0 34 chr2 213169751 213169926 -40086657 - AluY SINE Alu -1 310 131 203 61 30 0 chr2 213169926 213169959 -40086624 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 2346 75 0 34 chr2 213169959 213169970 -40086613 - AluY SINE Alu -180 131 121 2361 66 7 0 chr2 213169970 213170259 -40086324 - AluY SINE Alu -20 291 1 2346 75 0 34 chr2 213170259 213170392 -40086191 - AluY SINE Alu -190 121 1 263 337 157 0 chr2 213170418 213170501 -40086082 + MIR SINE MIR 18 113 -95 479 246 27 60 chr2 213171139 213171322 -40085261 - MER5B DNA MER1_type -1 177 1 221 371 38 19 chr2 213171406 213171511 -40085072 - MIR SINE MIR -85 123 17 21 0 0 0 chr2 213174090 213174111 -40082472 + AT_rich Low_complexity Low_complexity 1 21 0 713 140 35 0 chr2 213175489 213175603 -40080980 - MER20 DNA MER1_type -70 149 32 906 277 204 10 chr2 213175622 213176102 -40080481 - L2 LINE L2 -841 2473 1901 1928 116 29 0 chr2 213178016 213178323 -40078260 + AluSx SINE Alu 1 315 0 261 361 101 0 chr2 213178961 213179080 -40077503 + MIR SINE MIR 20 150 -112 270 330 31 0 chr2 213179089 213179186 -40077397 + L2 LINE L2 3180 3279 -34 972 258 226 0 chr2 213180859 213181196 -40075387 + L2 LINE L2 2901 3313 0 444 19 0 0 chr2 213181759 213181812 -40074771 + (CA)n Simple_repeat Simple_repeat 1 53 0 1190 161 16 5 chr2 213182651 213182837 -40073746 + AluJo SINE Alu 1 188 -124 255 402 8 0 chr2 213183982 213184099 -40072484 - L2 LINE L2 -1 3271 3154 1549 228 15 6 chr2 213184295 213184633 -40071950 - MER58B DNA MER1_type 0 341 1 21 0 0 0 chr2 213184900 213184921 -40071662 + AT_rich Low_complexity Low_complexity 1 21 0 1944 119 0 44 chr2 213184921 213185214 -40071369 - AluSx SINE Alu -32 280 1 2420 70 3 22 chr2 213185332 213185645 -40070938 - AluY SINE Alu -4 307 1 433 284 154 0 chr2 213186308 213186477 -40070106 + MER91A DNA MER1_type 2 196 0 2098 129 30 108 chr2 213186833 213187298 -40069285 + MSTB1 LTR MaLR 4 432 0 195 162 0 0 chr2 213187862 213187899 -40068684 + (TGAA)n Simple_repeat Simple_repeat 3 39 0 22 56 0 0 chr2 213188034 213188070 -40068513 + AT_rich Low_complexity Low_complexity 1 36 0 549 271 110 37 chr2 213188117 213188307 -40068276 + MLT1L LTR MaLR 46 221 -392 2074 117 9 38 chr2 213188307 213188624 -40067959 - AluSx SINE Alu -4 308 1 549 271 110 37 chr2 213188624 213188832 -40067751 + MLT1L LTR MaLR 221 412 -201 441 36 0 0 chr2 213188832 213188887 -40067696 + (TTCC)n Simple_repeat Simple_repeat 1 55 0 549 271 110 37 chr2 213188887 213188976 -40067607 + MLT1L LTR MaLR 412 605 -8 1980 136 13 7 chr2 213189316 213189618 -40066965 - AluSx SINE Alu -8 304 1 2277 71 32 0 chr2 213189826 213190109 -40066474 + AluSg SINE Alu 1 292 -18 781 291 31 9 chr2 213190577 213190896 -40065687 - L1MC/D LINE L1 -2173 5635 5310 640 299 116 74 chr2 213191004 213191425 -40065158 - L2 LINE L2 -1 3271 2833 41 36 0 0 chr2 213191489 213191544 -40065039 + AT_rich Low_complexity Low_complexity 1 55 0 331 230 111 7 chr2 213191629 213191764 -40064819 - HAL1 LINE L1 -114 2393 2245 221 367 0 0 chr2 213191795 213191874 -40064709 - L2 LINE L2 -568 2746 2668 283 300 36 83 chr2 213191974 213192005 -40064578 - L2 LINE L2 -834 2480 2449 2264 105 0 7 chr2 213192005 213192311 -40064272 - AluY SINE Alu -7 304 1 283 300 36 83 chr2 213192311 213192556 -40064027 - L2 LINE L2 -865 2449 2217 502 256 84 37 chr2 213192569 213192760 -40063823 - L2 LINE L2 -2 3311 3112 1039 232 100 10 chr2 213192915 213193204 -40063379 - Zaphod DNA AcHobo 0 4031 3717 349 225 101 0 chr2 213193205 213193294 -40063289 + L1ME3A LINE L1 6046 6143 -27 273 47 0 23 chr2 213193346 213193389 -40063194 + (TTTA)n Simple_repeat Simple_repeat 2 180 0 2268 85 4 0 chr2 213193389 213193670 -40062913 - AluY SINE Alu -29 282 1 1637 138 4 4 chr2 213193680 213193920 -40062663 - AluSq SINE Alu -23 290 51 1518 200 62 29 chr2 213193926 213194266 -40062317 - MLT1A1 LTR MaLR -1 364 14 1277 187 54 32 chr2 213194280 213194558 -40062025 - Zaphod DNA AcHobo -1331 2700 2417 216 0 0 0 chr2 213194561 213194585 -40061998 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1516 70 0 0 chr2 213194595 213194780 -40061803 + AluSq SINE Alu 1 185 -128 2225 112 0 0 chr2 213195269 213195563 -40061020 - AluSq SINE Alu -19 294 1 1119 110 6 25 chr2 213195633 213195796 -40060787 - AluSg/x SINE Alu -15 295 136 21 0 0 0 chr2 213195901 213195922 -40060661 + AT_rich Low_complexity Low_complexity 1 21 0 12536 140 21 10 chr2 213195922 213196847 -40059736 - L1MA3 LINE L1 0 7724 6810 2167 98 0 0 chr2 213196847 213197122 -40059461 - AluSg SINE Alu -1 309 35 12536 140 21 10 chr2 213197122 213199415 -40057168 - L1MA3 LINE L1 -914 6810 4464 2237 84 26 29 chr2 213199419 213199729 -40056854 - AluY SINE Alu -2 309 1 19642 136 18 5 chr2 213199729 213200505 -40056078 - L1MA3 LINE L1 -4459 3106 2342 2397 64 0 10 chr2 213200505 213200803 -40055780 - AluY SINE Alu -15 296 2 19642 136 18 5 chr2 213200803 213202952 -40053631 - L1MA3 LINE L1 -5223 2342 142 208 291 10 58 chr2 213203126 213203229 -40053354 + L3 LINE CR1 1260 1357 -220 356 230 135 115 chr2 213203984 213204332 -40052251 + MLT1I LTR MaLR 30 384 -25 2232 139 150 5 chr2 213204350 213204724 -40051859 + MSTA LTR MaLR 1 428 0 482 308 118 35 chr2 213204742 213205057 -40051526 + LTR16C LTR ERVL 151 491 0 390 288 16 24 chr2 213205385 213205510 -40051073 + L3 LINE CR1 1368 1491 -86 585 289 156 5 chr2 213205532 213205743 -40050840 - MIR SINE MIR 0 262 20 195 333 15 15 chr2 213205770 213205836 -40050747 + L3 LINE CR1 1510 1575 -2 258 293 53 0 chr2 213207935 213208010 -40048573 + MIR SINE MIR 109 187 -75 273 29 0 0 chr2 213208099 213208133 -40048450 + (TG)n Simple_repeat Simple_repeat 2 35 0 2019 164 0 0 chr2 213208399 213208709 -40047874 - AluSx SINE Alu 0 312 3 1722 159 30 27 chr2 213208996 213209297 -40047286 + AluJb SINE Alu 3 304 -8 2504 185 17 17 chr2 213209462 213209922 -40046661 + LOR1b LTR ERV1 2 461 0 234 314 97 0 chr2 213209923 213210047 -40046536 - MLT1L LTR MaLR -85 530 395 458 277 158 16 chr2 213210467 213210835 -40045748 - L1ME3A LINE L1 -219 5951 5532 4791 160 78 65 chr2 213210843 213211041 -40045542 + L1MA10 LINE L1 5019 5213 -1121 2847 19 0 0 chr2 213211041 213211353 -40045230 - L1PA2 LINE L1 0 6155 5844 4791 160 78 65 chr2 213211353 213211421 -40045162 + L1MA10 LINE L1 5213 5279 -1055 2493 51 0 0 chr2 213211421 213211717 -40044866 - AluY SINE Alu -15 296 1 4791 160 78 65 chr2 213211717 213212511 -40044072 + L1MA10 LINE L1 5279 6096 -238 2225 74 7 3 chr2 213212511 213212827 -40043756 + AluY SINE Alu 1 317 0 4791 160 78 65 chr2 213212827 213213067 -40043516 + L1MA10 LINE L1 6096 6331 -3 679 280 148 40 chr2 213213061 213213142 -40043441 - L1P5 LINE L1 -626 5530 5459 * 2185 85 0 0 chr2 213213142 213213413 -40043170 + AluSq SINE Alu 29 299 -14 679 280 148 40 chr2 213213413 213214275 -40042308 - L1P5 LINE L1 -697 5459 4488 250 333 0 0 chr2 213214414 213214513 -40042070 - L1M4 LINE L1 -1815 4331 4233 420 91 0 0 chr2 213215206 213215272 -40041311 + (CAT)n Simple_repeat Simple_repeat 3 68 0 872 310 13 0 chr2 213215961 213216200 -40040383 + LTR16B LTR ERVL 1 242 -222 210 284 32 53 chr2 213217083 213217178 -40039405 + L2 LINE L2 3178 3270 -2 387 225 80 36 chr2 213217453 213217601 -40038982 + LTR33 LTR ERVL 19 215 -306 555 223 47 79 chr2 213217654 213217701 -40038882 + LTR33 LTR ERVL 314 361 -160 1292 251 67 45 chr2 213217701 213218211 -40038372 + LTR33 LTR ERVL 1 521 0 555 223 47 79 chr2 213218211 213218378 -40038205 + LTR33 LTR ERVL 361 521 0 866 336 86 35 chr2 213218564 213219010 -40037573 + L3 LINE CR1 167 654 -923 2501 57 0 0 chr2 213219010 213219307 -40037276 + AluY SINE Alu 1 297 -14 866 336 86 35 chr2 213219307 213219467 -40037116 + L3 LINE CR1 654 804 -773 2247 264 45 60 chr2 213219476 213219858 -40036725 + L1ME3A LINE L1 4165 4551 -1595 2045 111 0 21 chr2 213219858 213220147 -40036436 + AluSx SINE Alu 1 283 -29 2247 264 45 60 chr2 213220147 213220820 -40035763 + L1ME3A LINE L1 4551 5204 -942 883 253 65 47 chr2 213220820 213220893 -40035690 + L1ME3A LINE L1 5781 5851 -319 2344 56 14 0 chr2 213220893 213221179 -40035404 + AluY SINE Alu 1 290 -21 2575 52 0 3 chr2 213221189 213221495 -40035088 + AluY SINE Alu 3 307 -4 883 253 65 47 chr2 213221495 213221793 -40034790 + L1ME3A LINE L1 5859 6170 0 703 160 59 0 chr2 213221866 213221985 -40034598 - LTR12 LTR ERV1 -230 484 359 291 290 10 0 chr2 213221985 213222085 -40034498 - LTR30 LTR ERV1 -98 624 524 868 113 302 6 chr2 213222085 213222244 -40034339 - LTR12 LTR ERV1 -456 258 53 245 231 0 0 chr2 213222244 213222296 -40034287 - LTR30 LTR ERV1 -670 52 1 259 277 20 50 chr2 213222302 213222403 -40034180 - MLT1J2 LTR MaLR -6 444 347 231 279 198 23 chr2 213222435 213222607 -40033976 - MLT1I LTR MaLR -189 220 19 653 288 10 102 chr2 213222623 213222918 -40033665 + L3 LINE CR1 879 1146 -431 273 191 0 167 chr2 213222927 213222978 -40033605 - MLT1I LTR MaLR -3 406 373 1934 152 7 3 chr2 213222978 213223275 -40033308 - AluJo SINE Alu -14 298 1 909 279 162 8 chr2 213223275 213223634 -40032949 - MLT1J2 LTR MaLR -36 414 1 660 271 57 24 chr2 213223634 213223881 -40032702 + L3 LINE CR1 1148 1402 -175 740 251 111 8 chr2 213223908 213224143 -40032440 - MIR SINE MIR -2 260 2 183 257 14 57 chr2 213224172 213224242 -40032341 + L3 LINE CR1 1468 1534 -43 836 112 0 0 chr2 213224282 213224389 -40032194 + U6 snRNA snRNA 1 107 0 32 26 0 0 chr2 213224397 213224436 -40032147 + AT_rich Low_complexity Low_complexity 1 39 0 463 283 65 49 chr2 213225678 213225862 -40030721 - MER5A DNA MER1_type 0 189 3 2530 57 0 0 chr2 213226542 213226842 -40029741 + AluY SINE Alu 1 300 -11 5449 108 147 94 chr2 213226870 213228388 -40028195 - pTR5 LTR ERV1 0 2438 383 195 42 0 0 chr2 213230987 213231011 -40025572 + (A)n Simple_repeat Simple_repeat 1 24 0 204 40 0 0 chr2 213231412 213231437 -40025146 + (TA)n Simple_repeat Simple_repeat 1 25 0 2326 59 3 10 chr2 213231437 213231725 -40024858 - AluY SINE Alu -25 286 1 383 213 117 0 chr2 213231799 213231893 -40024690 - MIR SINE MIR -12 250 146 432 0 0 0 chr2 213232238 213232286 -40024297 + (TG)n Simple_repeat Simple_repeat 2 49 0 962 264 169 22 chr2 213233474 213233918 -40022665 + MLT1J LTR MaLR 1 509 -2 369 299 147 29 chr2 213234030 213234234 -40022349 - LTR67 LTR ERVL -329 228 1 306 146 0 0 chr2 213235276 213235326 -40021257 + Alu SINE Alu 1 44 -256 1082 198 17 50 chr2 213235505 213235625 -40020958 + AluJo SINE Alu 3 113 -199 2382 81 0 3 chr2 213235625 213235921 -40020662 - AluY SINE Alu -16 295 1 1082 198 17 50 chr2 213235921 213236038 -40020545 + AluJo SINE Alu 113 232 -80 415 334 71 52 chr2 213236183 213236540 -40020043 + L1MC4a LINE L1 5306 5680 -2128 2419 88 0 3 chr2 213236540 213236847 -40019736 + AluY SINE Alu 1 306 -5 415 334 71 52 chr2 213236847 213237064 -40019519 + L1MC4a LINE L1 5680 5891 -1917 232 226 0 32 chr2 213237140 213237202 -40019381 + (TATATG)n Simple_repeat Simple_repeat 5 64 0 257 238 16 0 chr2 213237429 213237492 -40019091 - L1MC5 LINE L1 -185 7776 7713 380 270 25 31 chr2 213238201 213238364 -40018219 + L1ME4a LINE L1 5959 6120 -1 21 0 0 0 chr2 213239174 213239195 -40017388 + AT_rich Low_complexity Low_complexity 1 21 0 484 296 44 56 chr2 213240218 213240278 -40016305 - LTR16C LTR ERVL 0 491 432 2067 126 7 0 chr2 213240278 213240591 -40015992 - AluSx SINE Alu 0 315 1 484 296 44 56 chr2 213240591 213240779 -40015804 - LTR16C LTR ERVL -59 432 245 4125 215 56 28 chr2 213240928 213241645 -40014938 + L1M4 LINE L1 13 768 -5774 2300 90 3 6 chr2 213241645 213241956 -40014627 + AluSp SINE Alu 1 310 -3 4125 215 56 28 chr2 213241956 213242262 -40014321 + L1M4 LINE L1 768 1064 -5478 401 242 22 0 chr2 213242268 213242359 -40014224 - L1M4 LINE L1 -6178 364 272 1263 179 0 24 chr2 213242413 213242664 -40013919 + L1M4 LINE L1 1090 1334 -5208 788 126 17 0 chr2 213242664 213242783 -40013800 + MLT1A1 LTR MaLR 1 121 -244 448 176 24 0 chr2 213242768 213242853 -40013730 + MLT1A1 LTR MaLR 229 315 -59 * 486 54 0 0 chr2 213242854 213242936 -40013647 - AluY SINE Alu 0 308 227 1476 83 0 0 chr2 213242936 213243116 -40013467 - AluY SINE Alu -131 180 1 348 183 0 0 chr2 213243116 213243176 -40013407 + MLT1A1 LTR MaLR 304 363 -2 1753 196 39 25 chr2 213243177 213243615 -40012968 + L1M4 LINE L1 1323 1766 -4880 2519 183 45 0 chr2 213243620 213244089 -40012494 + L1MB7 LINE L1 5695 6184 0 37 86 0 0 chr2 213244389 213244482 -40012101 + AT_rich Low_complexity Low_complexity 1 93 0 183 291 0 22 chr2 213244669 213244764 -40011819 - MER5A DNA MER1_type -76 103 12 384 322 13 27 chr2 213244786 213244935 -40011648 - MIR3 SINE MIR -53 155 9 368 91 15 0 chr2 213245584 213245650 -40010933 + (TG)n Simple_repeat Simple_repeat 1 67 0 273 335 51 37 chr2 213245680 213245895 -40010688 - L2 LINE L2 -454 2860 2643 219 226 16 32 chr2 213246130 213246192 -40010391 + GA-rich Low_complexity Low_complexity 4 64 0 807 182 0 0 chr2 213246955 213247087 -40009496 + FLAM_C SINE Alu 1 132 -1 445 158 110 24 chr2 213247285 213247412 -40009171 + MER96B DNA MER1_type? 241 378 -39 2248 233 68 46 chr2 213247635 213248164 -40008419 - L1MEc LINE L1 -4916 1480 923 1605 177 0 0 chr2 213248164 213248412 -40008171 - AluJb SINE Alu -64 248 1 2248 233 68 46 chr2 213248412 213248733 -40007850 - L1MEc LINE L1 -5473 923 611 839 246 25 30 chr2 213248772 213249008 -40007575 - L1MEc LINE L1 -6136 260 26 264 246 25 76 chr2 213249123 213249241 -40007342 - LTR37B LTR ERV1 -8 460 349 2158 129 0 0 chr2 213249270 213249564 -40007019 + AluSx SINE Alu 1 294 -18 240 200 0 0 chr2 213249593 213249648 -40006935 + GA-rich Low_complexity Low_complexity 2 56 0 569 152 19 0 chr2 213249652 213249757 -40006826 - LTR37B LTR ERV1 -164 304 198 403 250 86 16 chr2 213249853 213249981 -40006602 - LTR37B LTR ERV1 -314 154 18 198 0 0 0 chr2 213250000 213250022 -40006561 + (T)n Simple_repeat Simple_repeat 1 22 0 559 289 6 22 chr2 213250120 213250300 -40006283 + MER5B DNA MER1_type 2 178 0 21 0 0 0 chr2 213250594 213250615 -40005968 + AT_rich Low_complexity Low_complexity 1 21 0 330 350 20 0 chr2 213251022 213251219 -40005364 - L1M4 LINE L1 -2196 3950 3750 208 319 0 33 chr2 213251277 213251368 -40005215 - MIR SINE MIR -103 159 72 845 275 17 0 chr2 213251686 213251922 -40004661 + L2 LINE L2 2828 3067 -246 1320 175 0 21 chr2 213251942 213252182 -40004401 + MER46A DNA MER2_type 2 236 0 1169 126 70 74 chr2 213252182 213252397 -40004186 - MLT1C LTR MaLR -2 465 175 753 181 190 28 chr2 213252397 213252613 -40003970 - LTR16C LTR ERVL -53 438 188 2189 107 0 13 chr2 213252890 213253190 -40003393 - AluSg SINE Alu -14 296 1 268 294 34 17 chr2 213253374 213253493 -40003090 + (TATATG)n Simple_repeat Simple_repeat 2 122 0 544 302 164 3 chr2 213253503 213253808 -40002775 - L1MC4a LINE L1 -1884 5924 5571 251 265 50 50 chr2 213253866 213254047 -40002536 - L2 LINE L2 -2409 905 725 812 234 71 102 chr2 213254506 213255028 -40001555 - MLT1J LTR MaLR -3 508 3 2972 161 67 16 chr2 213255069 213255640 -40000943 - L1MB4 LINE L1 0 6180 5581 781 227 32 57 chr2 213256150 213256397 -40000186 + MIR SINE MIR 7 247 -15 1155 165 0 0 chr2 213256460 213256636 -39999947 - AluSg/x SINE Alu -3 309 134 1759 176 0 20 chr2 213257103 213257404 -39999179 - AluJo SINE Alu -12 300 6 288 346 87 11 chr2 213258489 213258674 -39997909 + L2 LINE L2 2853 3051 -262 484 297 109 6 chr2 213260135 213260310 -39996273 + MIR3 SINE MIR 16 208 0 1612 193 53 24 chr2 213260367 213260540 -39996043 + MLT1B LTR MaLR 1 167 -223 1977 91 15 11 chr2 213260540 213260805 -39995778 + AluSq SINE Alu 36 301 -12 1612 193 53 24 chr2 213260805 213261010 -39995573 + MLT1B LTR MaLR 167 390 0 1827 229 42 14 chr2 213261197 213261624 -39994959 - MER21B LTR ERV1 -108 755 317 2163 134 3 10 chr2 213262756 213263070 -39993513 + AluSx SINE Alu 1 312 0 2507 79 0 0 chr2 213263535 213263839 -39992744 - AluY SINE Alu -7 304 1 1908 155 3 0 chr2 213264106 213264390 -39992193 - AluJo SINE Alu -9 303 19 847 254 113 97 chr2 213264391 213264930 -39991653 - LTR67 LTR ERVL -7 550 3 22 35 0 0 chr2 213265297 213265326 -39991257 + AT_rich Low_complexity Low_complexity 1 29 0 359 302 111 44 chr2 213265995 213266220 -39990363 - MIR SINE MIR -12 250 11 248 325 36 0 chr2 213266702 213266785 -39989798 - L2 LINE L2 -17 3255 3170 369 267 160 27 chr2 213266924 213267186 -39989397 - L2 LINE L2 -1007 2307 2011 1681 191 32 40 chr2 213267205 213267577 -39989006 + MLT1B LTR MaLR 22 390 0 196 288 17 0 chr2 213267845 213267904 -39988679 + L2 LINE L2 3206 3265 -7 361 235 71 33 chr2 213267984 213268180 -39988403 - MIR SINE MIR -4 258 5 337 279 67 19 chr2 213268203 213268359 -39988224 + MIR3 SINE MIR 44 207 -1 579 128 15 90 chr2 213269790 213269851 -39986732 - MLT1E3 LTR MaLR -4 620 573 2448 93 70 14 chr2 213269851 213270196 -39986387 + THE1B LTR MaLR 1 364 0 579 128 15 90 chr2 213270196 213270267 -39986316 - MLT1E3 LTR MaLR -51 573 498 1331 150 0 77 chr2 213270274 213270520 -39986063 - AluJb SINE Alu -1 311 85 2312 174 97 47 chr2 213270528 213270943 -39985640 - MLT1E2 LTR MaLR -65 561 111 2132 111 11 0 chr2 213270943 213271246 -39985337 + AluSx SINE Alu 2 307 0 2312 174 97 47 chr2 213271246 213271363 -39985220 - MLT1E2 LTR MaLR -515 111 1 404 252 0 47 chr2 213271971 213272078 -39984505 + MIR SINE MIR 55 156 -106 650 258 43 0 chr2 213272274 213272437 -39984146 + MER63A DNA MER1_type 10 179 -31 184 243 0 0 chr2 213272437 213272474 -39984109 - L2 LINE L2 -43 3229 3193 21 57 0 0 chr2 213273748 213273783 -39982800 + AT_rich Low_complexity Low_complexity 1 35 0 2343 73 0 0 chr2 213274060 213274349 -39982234 - AluY SINE Alu -22 289 1 921 135 15 70 chr2 213274572 213274772 -39981811 - MER53 DNA DNA 0 189 1 21 36 0 0 chr2 213275094 213275122 -39981461 + AT_rich Low_complexity Low_complexity 1 28 0 1231 215 172 12 chr2 213275997 213276076 -39980507 - LTR50 LTR ERVL 0 795 730 2375 88 7 0 chr2 213276076 213276371 -39980212 + AluSc SINE Alu 1 297 -12 1231 215 172 12 chr2 213276371 213276809 -39979774 - LTR50 LTR ERVL -65 730 78 2528 99 19 11 chr2 213276809 213277184 -39979399 + L1PA11 LINE L1 5797 6174 0 1231 215 172 12 chr2 213277184 213277277 -39979306 - LTR50 LTR ERVL -717 78 1 764 344 68 22 chr2 213277346 213277874 -39978709 + L2 LINE L2 2729 3271 -1 226 293 10 50 chr2 213278687 213278786 -39977797 - L2 LINE L2 0 3272 3178 320 352 145 0 chr2 213278879 213279038 -39977545 - L2 LINE L2 -275 3038 2857 2854 217 52 14 chr2 213279416 213280107 -39976476 + L1ME1 LINE L1 5432 6148 -18 22 0 0 0 chr2 213280345 213280367 -39976216 + AT_rich Low_complexity Low_complexity 1 22 0 256 310 55 28 chr2 213281107 213281252 -39975331 - L3 LINE CR1 -159 1418 1270 * 349 295 35 58 chr2 213281243 213281345 -39975238 + MIR SINE MIR 81 179 -83 2223 112 3 7 chr2 213281345 213281640 -39974943 + AluSq SINE Alu 1 294 -19 349 295 35 58 chr2 213281640 213281710 -39974873 + MIR SINE MIR 179 249 -13 477 315 50 80 chr2 213281835 213282043 -39974540 - L2 LINE L2 0 3272 3059 1578 209 154 36 chr2 213282043 213282492 -39974091 - MLT1D LTR MaLR -2 503 2 477 315 50 80 chr2 213282492 213282992 -39973591 - L2 LINE L2 -213 3059 2589 363 314 26 33 chr2 213283777 213283930 -39972653 + MER5A DNA MER1_type 3 154 -35 750 116 0 89 chr2 213287066 213287101 -39969482 - AluJo SINE Alu -178 134 97 2239 113 3 0 chr2 213287101 213287402 -39969181 - AluSp SINE Alu -11 302 1 750 116 0 89 chr2 213287402 213287512 -39969071 - AluJo SINE Alu -215 97 2 888 146 22 11 chr2 213287569 213287747 -39968836 - L1MA4 LINE L1 -1 6299 6120 2672 58 0 0 chr2 213287946 213288257 -39968326 + AluY SINE Alu 1 311 0 968 274 38 78 chr2 213288411 213288516 -39968067 + LTR16B LTR ERVL 23 131 -333 1975 48 0 0 chr2 213288516 213288745 -39967838 - AluY SINE Alu 0 311 83 968 274 38 78 chr2 213288745 213289085 -39967498 + LTR16B LTR ERVL 131 450 -14 2641 285 91 33 chr2 213289355 213290379 -39966204 + ERVL LTR ERVL 343 1425 -3571 4327 313 68 35 chr2 213290444 213293896 -39962687 + ERVL LTR ERVL 1719 5379 -385 859 301 78 29 chr2 213294018 213294115 -39962468 + LTR16B LTR ERVL 1 92 -372 1630 211 25 19 chr2 213294115 213294476 -39962107 - MLT1A1 LTR MaLR 0 365 3 859 301 78 29 chr2 213294476 213294790 -39961793 + LTR16B LTR ERVL 92 432 -32 537 146 27 5 chr2 213295033 213295220 -39961363 + CT-rich Low_complexity Low_complexity 1 191 0 234 0 0 0 chr2 213295453 213295479 -39961104 + (TA)n Simple_repeat Simple_repeat 2 27 0 25 31 0 0 chr2 213295520 213295552 -39961031 + AT_rich Low_complexity Low_complexity 1 32 0 594 281 99 35 chr2 213296846 213297159 -39959424 - MARNA DNA Mariner -182 404 72 335 265 228 9 chr2 213298400 213298615 -39957968 - L1ME4a LINE L1 -1 6120 5859 202 331 110 52 chr2 213298632 213298786 -39957797 - MIR3 SINE MIR -9 199 37 222 277 12 12 chr2 213299490 213299573 -39957010 + CT-rich Low_complexity Low_complexity 2 84 0 2663 165 33 46 chr2 213300928 213301474 -39955109 - L1MB5 LINE L1 -14 6160 5622 510 301 68 23 chr2 213301559 213301735 -39954848 + MIR3 SINE MIR 2 185 -23 309 209 30 0 chr2 213302422 213302489 -39954094 + MIR SINE MIR 83 151 -57 2214 89 11 0 chr2 213302801 213303109 -39953474 - AluSx SINE Alu 0 311 1 833 290 16 12 chr2 213304604 213304852 -39951731 - MIR SINE MIR -6 256 8 347 252 163 14 chr2 213305225 213305372 -39951211 - LTR33 LTR ERVL -3 518 350 247 196 0 0 chr2 213305724 213305770 -39950813 + MIR SINE MIR 89 134 -74 2258 237 75 34 chr2 213305835 213306638 -39949945 - L1MC4 LINE L1 -3 8039 7204 342 284 193 30 chr2 213307010 213307207 -39949376 - MIR SINE MIR -13 249 21 538 266 31 0 chr2 213307228 213307356 -39949227 + MIR SINE MIR 48 179 -83 2444 83 0 10 chr2 213307377 213307690 -39948893 + AluSq SINE Alu 2 311 -2 1108 235 14 0 chr2 213307840 213308061 -39948522 + MER58A DNA MER1_type 1 224 0 234 354 127 53 chr2 213308214 213308593 -39947990 + L2 LINE L2 2855 3261 -11 505 143 0 98 chr2 213308673 213308785 -39947798 + L1PA11 LINE L1 6073 6173 -1 301 280 145 5 chr2 213308789 213308982 -39947601 - L2 LINE L2 -226 3046 2827 283 323 113 15 chr2 213309083 213309216 -39947367 + L2 LINE L2 3115 3260 -12 186 356 77 36 chr2 213311733 213311980 -39944603 - L2 LINE L2 -421 2893 2637 322 320 186 12 chr2 213312443 213312615 -39943968 - MIR3 SINE MIR -2 206 5 323 212 12 0 chr2 213314425 213314510 -39942073 + CT-rich Low_complexity Low_complexity 2 87 0 339 25 0 0 chr2 213315576 213315616 -39940967 + (TA)n Simple_repeat Simple_repeat 2 41 0 26 0 0 0 chr2 213316151 213316177 -39940406 + AT_rich Low_complexity Low_complexity 1 26 0 497 276 43 22 chr2 213316827 213317012 -39939571 + MER5A DNA MER1_type 1 189 0 299 263 0 0 chr2 213317021 213317097 -39939486 + CT-rich Low_complexity Low_complexity 2 77 0 2222 120 10 0 chr2 213319186 213319495 -39937088 + AluSx SINE Alu 1 312 0 266 320 39 31 chr2 213319789 213319902 -39936681 - MER5A DNA MER1_type -20 169 45 273 371 40 8 chr2 213319984 213320108 -39936475 - MIR SINE MIR -58 150 23 2002 97 0 60 chr2 213320835 213321135 -39935448 + AluSx SINE Alu 1 282 -30 676 289 22 11 chr2 213321385 213321565 -39935018 - MIR SINE MIR -61 201 20 217 0 61 0 chr2 213322600 213322633 -39933950 + (TG)n Simple_repeat Simple_repeat 1 35 0 308 305 29 0 chr2 213322781 213322886 -39933697 + L3 LINE CR1 1210 1317 -260 3302 70 70 0 chr2 213323467 213323842 -39932741 + MLT2A1 LTR ERVL 1 409 -35 396 0 0 0 chr2 213323842 213323886 -39932697 + (TCTA)n Simple_repeat Simple_repeat 3 46 0 3302 70 70 0 chr2 213323886 213323925 -39932658 + MLT2A1 LTR ERVL 409 444 0 377 261 23 11 chr2 213324320 213324408 -39932175 - MIR SINE MIR -154 108 20 1763 174 31 0 chr2 213324575 213324863 -39931720 + AluJb SINE Alu 1 297 -15 1506 118 86 82 chr2 213325583 213325889 -39930694 - AluSx SINE Alu 0 311 5 403 164 309 9 chr2 213326500 213326610 -39929973 + MIR SINE MIR 113 255 -7 392 346 86 48 chr2 213326841 213327341 -39929242 + LTR33 LTR ERVL 3 521 0 298 310 0 30 chr2 213327350 213327450 -39929133 + MIR3 SINE MIR 91 187 -21 199 394 27 0 chr2 213328404 213328493 -39928090 + MIR SINE MIR 41 132 -76 249 231 88 44 chr2 213330519 213330610 -39925973 + L2 LINE L2 3197 3291 -22 1468 216 7 0 chr2 213331111 213331398 -39925185 + AluJb SINE Alu 1 289 -23 474 304 69 14 chr2 213331471 213331639 -39924944 - MIR SINE MIR 0 262 78 1719 202 135 0 chr2 213331639 213331986 -39924597 - MSTD LTR MaLR 0 396 3 474 304 69 14 chr2 213331986 213332034 -39924549 - MIR SINE MIR -184 78 34 210 71 0 0 chr2 213332099 213332127 -39924456 + (T)n Simple_repeat Simple_repeat 1 28 0 190 195 0 49 chr2 213333521 213333562 -39923021 - L2 LINE L2 -32 3240 3202 2249 94 3 7 chr2 213334820 213335117 -39921466 - AluSq SINE Alu -17 296 1 209 283 87 43 chr2 213335136 213335228 -39921355 - MIR SINE MIR -92 116 21 2075 147 0 0 chr2 213335330 213335630 -39920953 - AluSx SINE Alu -12 300 1 214 171 0 24 chr2 213335828 213335869 -39920714 + GA-rich Low_complexity Low_complexity 1 40 0 442 268 163 0 chr2 213336117 213336270 -39920313 + MER5A DNA MER1_type 9 186 -3 487 255 58 24 chr2 213336342 213336547 -39920036 + MIR3 SINE MIR 7 209 -53 269 243 0 29 chr2 213336793 213336863 -39919720 + MER5B DNA MER1_type 1 68 -110 1762 165 7 0 chr2 213336866 213337145 -39919438 + AluJo SINE Alu 5 285 -27 351 0 0 0 chr2 213337145 213337184 -39919399 + (CA)n Simple_repeat Simple_repeat 2 40 0 379 216 52 97 chr2 213337202 213337336 -39919247 - MER5B DNA MER1_type -50 128 1 1213 143 0 6 chr2 213337557 213337739 -39918844 + FRAM SINE Alu 1 172 -4 209 233 0 0 chr2 213338009 213338052 -39918531 + A-rich Low_complexity Low_complexity 1 43 0 203 255 0 0 chr2 213338055 213338102 -39918481 + CT-rich Low_complexity Low_complexity 4 50 0 3901 59 14 45 chr2 213338149 213338658 -39917925 + L1PA8 LINE L1 5680 6172 0 1587 246 42 73 chr2 213340698 213341270 -39915313 + MLT2B3 LTR ERVL 1 554 0 437 325 35 18 chr2 213341408 213341577 -39915006 + MIR3 SINE MIR 23 194 -14 2009 86 21 0 chr2 213341592 213341872 -39914711 + L1PA10 LINE L1 5813 6098 -70 446 218 14 70 chr2 213342864 213343006 -39913577 - L2 LINE L2 0 3313 3180 * 979 269 121 15 chr2 213342999 213343397 -39913186 - L2 LINE L2 -1064 2250 1811 1390 258 118 21 chr2 213343560 213344026 -39912557 - MLT1J LTR MaLR 0 511 1 2958 195 52 52 chr2 213344426 213345055 -39911528 + L1 LINE L1 3614 4245 -1901 1533 108 129 12 chr2 213345055 213345296 -39911287 + AluSg1 SINE Alu 41 309 0 2958 195 52 52 chr2 213345296 213345385 -39911198 + L1 LINE L1 4244 4332 -1814 39 22 0 0 chr2 213345768 213345814 -39910769 + AT_rich Low_complexity Low_complexity 1 46 0 217 308 79 51 chr2 213346119 213346333 -39910250 + L3b LINE CR1 1233 1452 -131 29 0 0 0 chr2 213346603 213346632 -39909951 + AT_rich Low_complexity Low_complexity 1 29 0 2285 89 3 0 chr2 213346668 213346959 -39909624 + AluY SINE Alu 1 292 -19 1314 153 20 24 chr2 213346968 213347217 -39909366 - L1MC1 LINE L1 -6 6327 6080 268 188 31 0 chr2 213347346 213347410 -39909173 + MER57A LTR ERV1 338 403 0 255 200 18 0 chr2 213347435 213347490 -39909093 + L1 LINE L1 4892 4947 -1199 5361 167 26 38 chr2 213347770 213349122 -39907461 + L1MC1 LINE L1 5005 6333 0 2949 173 34 0 chr2 213349390 213349893 -39906690 + MLT2B1 LTR ERVL 1 520 0 317 313 22 8 chr2 213349991 213350125 -39906458 - L1M4 LINE L1 -1947 4199 4064 256 254 0 0 chr2 213350496 213350563 -39906020 - L1MC4a LINE L1 -1896 5912 5846 488 328 49 0 chr2 213350588 213350771 -39905812 + MIR SINE MIR 61 252 -10 722 286 62 0 chr2 213350912 213351139 -39905444 + MIR SINE MIR 15 255 -7 185 289 0 0 chr2 213351177 213351222 -39905361 + MIR SINE MIR 60 104 -158 318 85 0 0 chr2 213351223 213351270 -39905313 - MADE1 DNA Mariner -29 51 5 390 42 0 0 chr2 213351897 213351945 -39904638 + (CA)n Simple_repeat Simple_repeat 2 49 0 21 0 0 0 chr2 213352140 213352161 -39904422 + AT_rich Low_complexity Low_complexity 1 21 0 296 247 303 27 chr2 213353150 213353210 -39903373 + MIR SINE MIR 35 77 -185 2545 70 0 3 chr2 213353210 213353523 -39903060 - AluSx SINE Alu 0 312 1 296 247 303 27 chr2 213353523 213353633 -39902950 + MIR SINE MIR 77 256 -6 1725 122 106 26 chr2 213353720 213354032 -39902551 - MER1B DNA MER1_type 0 337 1 2476 35 10 0 chr2 213354069 213354357 -39902226 + AluY SINE Alu 2 292 -19 945 238 36 36 chr2 213354357 213354609 -39901974 + MIR SINE MIR 9 260 -2 429 122 0 12 chr2 213354732 213354814 -39901769 - MER33 DNA MER1_type 0 363 283 2178 188 48 4 chr2 213354814 213355298 -39901285 + L1MD3 LINE L1 7477 7981 -14 676 182 134 14 chr2 213355304 213355513 -39901070 - MER33 DNA MER1_type -70 254 21 397 245 25 63 chr2 213355759 213355918 -39900665 - MER113 DNA MER1_type? 0 521 369 401 184 92 53 chr2 213355998 213356204 -39900379 - MER113 DNA MER1_type? -264 257 44 229 275 0 25 chr2 213356401 213356481 -39900102 + CT-rich Low_complexity Low_complexity 3 80 0 479 165 52 0 chr2 213357353 213357468 -39899115 - AluSq/x SINE Alu -191 121 1 1963 134 30 70 chr2 213358373 213358776 -39897807 - MLT1B LTR MaLR 0 390 4 1673 164 64 0 chr2 213358948 213359228 -39897355 - AluJo SINE Alu -14 298 1 811 275 141 27 chr2 213359574 213359985 -39896598 - LTR33 LTR ERVL -21 500 43 1129 290 132 21 chr2 213360279 213360546 -39896037 + MLT1K LTR MaLR 10 246 -342 2169 121 0 0 chr2 213360546 213360844 -39895739 - AluSx SINE Alu -13 299 2 1129 290 132 21 chr2 213360844 213361097 -39895486 + MLT1K LTR MaLR 246 588 0 1784 171 0 39 chr2 213361322 213361631 -39894952 + AluJb SINE Alu 1 297 -15 2299 116 0 0 chr2 213362019 213362321 -39894262 + AluSx SINE Alu 1 302 -10 1119 217 0 0 chr2 213362395 213362616 -39893967 + Tigger5 DNA MER2_type 1 221 -2102 * 2410 141 37 37 chr2 213362614 213363102 -39893481 + Tigger5 DNA MER2_type 1836 2323 0 395 290 16 0 chr2 213363265 213363389 -39893194 - L1ME LINE L1 -518 5603 5478 362 264 65 65 chr2 213363613 213363844 -39892739 - L1ME LINE L1 -817 5329 5099 388 283 80 63 chr2 213364012 213364298 -39892285 - L1ME LINE L1 -1086 5060 4770 274 286 17 34 chr2 213364305 213364483 -39892100 - L1ME LINE L1 -1440 4706 4532 233 325 0 48 chr2 213364553 213364741 -39891842 + T-rich Low_complexity Low_complexity 2 180 0 * 285 301 0 49 chr2 213364601 213364744 -39891839 + CT-rich Low_complexity Low_complexity 5 140 0 962 322 99 45 chr2 213365204 213366091 -39890492 - L1ME LINE L1 -2305 3841 2874 2085 119 3 3 chr2 213366091 213366384 -39890199 - AluSx SINE Alu -19 293 1 962 322 99 45 chr2 213366384 213366673 -39889910 - L1ME LINE L1 -3272 2874 2602 393 367 39 5 chr2 213367167 213367374 -39889209 - L1M4 LINE L1 -1081 5065 4852 405 250 98 0 chr2 213367694 213367826 -39888757 + LTR67 LTR ERVL 402 546 -11 306 270 95 50 chr2 213367844 213368044 -39888539 - L1M4 LINE L1 -1282 4864 4656 235 319 158 19 chr2 213368520 213368663 -39887920 + MIR SINE MIR 19 129 -79 2253 115 3 6 chr2 213368953 213369266 -39887317 - AluSx SINE Alu 0 312 1 21 0 0 0 chr2 213369829 213369850 -39886733 + AT_rich Low_complexity Low_complexity 1 21 0 246 311 82 0 chr2 213369852 213369974 -39886609 - LTR67 LTR ERVL -24 533 402 265 264 73 49 chr2 213370230 213370476 -39886107 - L1ME4a LINE L1 -24 6097 5846 474 255 170 21 chr2 213371094 213371124 -39885459 - MIR SINE MIR 0 262 238 2579 43 3 3 chr2 213371124 213371426 -39885157 - AluY SINE Alu -9 302 1 474 255 170 21 chr2 213371426 213371583 -39885000 - MIR SINE MIR -24 238 47 200 188 0 0 chr2 213371594 213371626 -39884957 + (TATG)n Simple_repeat Simple_repeat 3 34 0 448 276 26 83 chr2 213371653 213371881 -39884702 + Charlie8 DNA MER1_type 1 215 -2202 339 25 0 0 chr2 213371881 213371921 -39884662 + (TG)n Simple_repeat Simple_repeat 1 40 0 849 158 14 0 chr2 213371955 213372101 -39884482 + THE1C LTR MaLR 1 148 -227 425 280 100 0 chr2 213422941 213423091 -39833492 - L1MC4 LINE L1 -162 7880 7716 2776 78 98 5 chr2 213423113 213423523 -39833060 - LTR7 LTR ERV1 -2 448 1 2411 98 48 13 chr2 213423523 213423900 -39832683 - HERVH LTR ERV1 0 7713 7324 1349 148 18 5 chr2 213423900 213424117 -39832466 - HERVH LTR ERV1 -1894 5819 5600 4551 129 0 3 chr2 213424121 213424782 -39831801 - HERVH LTR ERV1 -2567 5146 4488 3512 92 6 6 chr2 213424785 213425286 -39831297 - HERVH LTR ERV1 -3721 3992 3492 911 149 20 0 chr2 213425276 213425424 -39831159 - HERVH LTR ERV1 -4423 3290 3140 * 21256 85 8 22 chr2 213425410 213428447 -39828136 - HERVH LTR ERV1 -4721 2992 1 2132 64 261 6 chr2 213428449 213428806 -39827777 - LTR7 LTR ERV1 -2 448 1 2685 201 162 96 chr2 213428808 213429916 -39826667 - L1MC4 LINE L1 -410 7632 6452 364 250 48 0 chr2 213430289 213430373 -39826210 + LTR16C LTR ERVL 404 491 0 379 292 82 6 chr2 213430376 213430547 -39826036 + LTR33 LTR ERVL 334 517 -4 1933 158 0 29 chr2 213431926 213432242 -39824341 - AluJo SINE Alu -5 307 1 1566 201 141 26 chr2 213432451 213432904 -39823679 - MLT1D LTR MaLR 0 505 1 549 344 62 11 chr2 213435473 213435749 -39820834 - L3 LINE CR1 -25 1552 1263 1775 139 4 0 chr2 213436256 213436507 -39820076 + AluSq SINE Alu 1 252 -61 2009 89 7 7 chr2 213436508 213436778 -39819805 + AluSq SINE Alu 37 306 -7 2395 170 100 13 chr2 213437262 213437722 -39818861 + MLT1D LTR MaLR 6 505 0 1900 178 63 34 chr2 213437735 213438275 -39818308 + MLT2A2 LTR ERVL 1 554 0 2041 140 0 3 chr2 213438489 213438817 -39817766 + AluSx SINE Alu 1 327 0 5132 224 115 53 chr2 213439019 213439448 -39817135 + L1M4 LINE L1 2849 3250 -2896 423 0 0 0 chr2 213439448 213439495 -39817088 + (TAAAA)n Simple_repeat Simple_repeat 2 48 0 3384 100 11 4 chr2 213439501 213439951 -39816632 - MLT2A2 LTR ERVL 0 453 1 5132 224 115 53 chr2 213439951 213441486 -39815097 + L1M4 LINE L1 3254 5023 -1123 2221 123 0 0 chr2 213441486 213441786 -39814797 + AluSx SINE Alu 1 300 -12 5132 224 115 53 chr2 213441786 213442181 -39814402 + L1M4 LINE L1 5023 5392 -754 2192 121 45 20 chr2 213443358 213443713 -39812870 - THE1B LTR MaLR 0 364 1 953 213 82 0 chr2 213444276 213444483 -39812100 - MER58A DNA MER1_type 0 224 1 1361 212 319 15 chr2 213444505 213445113 -39811470 + LTR50 LTR ERVL 3 795 0 24 0 0 0 chr2 213445698 213445722 -39810861 + AT_rich Low_complexity Low_complexity 1 24 0 695 240 19 0 chr2 213445934 213446088 -39810495 + MER110 LTR ERV1 5 161 -330 827 296 32 57 chr2 213446090 213446529 -39810054 + LTR16A LTR ERVL 22 449 -1 * 1006 251 127 10 chr2 213446529 213446821 -39809762 + MER110 LTR ERV1 159 485 -6 442 0 0 0 chr2 213447325 213447374 -39809209 + (TTTA)n Simple_repeat Simple_repeat 2 88 0 1604 116 0 5 chr2 213447374 213447589 -39808994 - AluSc SINE Alu -1 327 66 193 287 46 154 chr2 213447838 213448033 -39808550 - L3b LINE CR1 -227 1356 1183 2774 13 0 0 chr2 213448053 213448358 -39808225 - AluYb8 SINE Alu -13 305 1 2231 91 9 0 chr2 213448637 213448968 -39807615 - L1P5 LINE L1 -475 5676 5343 1303 143 5 9 chr2 213448968 213449189 -39807394 + L1PB1 LINE L1 5927 6148 -3 769 247 84 58 chr2 213449977 213450507 -39806076 - MER39 LTR ERV1 -7 700 1 2172 119 0 6 chr2 213451362 213451673 -39804910 + AluSx SINE Alu 1 309 -3 193 152 0 0 chr2 213452210 213452243 -39804340 - L2 LINE L2 -16 3297 3265 399 313 34 7 chr2 213452592 213452739 -39803844 - L2 LINE L2 0 3313 3163 216 311 118 17 chr2 213452977 213453096 -39803487 - L2 LINE L2 -238 3034 2904 265 290 40 10 chr2 213453712 213453812 -39802771 + MIR SINE MIR 40 142 -66 267 295 90 25 chr2 213453917 213454039 -39802544 + L2 LINE L2 3141 3270 -2 214 310 132 29 chr2 213454454 213454628 -39801955 + L2 LINE L2 2871 3062 -210 574 314 17 0 chr2 213454830 213455005 -39801578 - MIR SINE MIR 0 262 85 397 294 27 21 chr2 213455964 213456176 -39800407 - MIR SINE MIR -6 256 10 257 259 17 0 chr2 213456194 213456252 -39800331 + MIR SINE MIR 48 106 -102 5991 116 86 28 chr2 213456771 213457104 -39799479 - Tigger3b DNA MER2_type -1797 1231 919 224 59 29 0 chr2 213457104 213457138 -39799445 + (TGAG)n Simple_repeat Simple_repeat 1 35 0 5991 116 86 28 chr2 213457138 213457272 -39799311 - Tigger3b DNA MER2_type -2109 919 794 1460 63 0 0 chr2 213457272 213457461 -39799122 + L1PA4 LINE L1 5967 6155 0 5991 116 86 28 chr2 213457461 213458155 -39798428 - Tigger3b DNA MER2_type -2234 794 1 253 196 0 0 chr2 213458259 213458310 -39798273 + L1M4 LINE L1 5814 5864 -310 203 152 0 0 chr2 213460505 213460538 -39796045 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 214 368 0 58 chr2 213460777 213460932 -39795651 - L2 LINE L2 -424 2890 2745 332 283 183 35 chr2 213460955 213461185 -39795398 - L2 LINE L2 -865 2449 2186 287 260 27 0 chr2 213461247 213461320 -39795263 + MIR3 SINE MIR 133 207 -1 301 268 21 10 chr2 213462194 213462291 -39794292 - LTR33 LTR ERVL -3 518 421 755 228 73 5 chr2 213462401 213462607 -39793976 - LTR33 LTR ERVL -299 222 3 201 306 41 10 chr2 213462607 213462705 -39793878 + MIR SINE MIR 141 241 -21 1056 172 6 0 chr2 213462715 213462884 -39793699 + FAM SINE Alu 1 170 -5 21 0 0 0 chr2 213462891 213462912 -39793671 + AT_rich Low_complexity Low_complexity 1 21 0 1912 183 90 38 chr2 213463077 213463557 -39793026 - MLT1D LTR MaLR 0 505 1 415 355 73 13 chr2 213463686 213463999 -39792584 - LTR16C LTR ERVL -11 480 149 408 298 108 64 chr2 213464509 213464944 -39791639 - L2 LINE L2 -204 3068 2592 404 301 159 0 chr2 213465139 213465302 -39791281 + L3 LINE CR1 1331 1519 -58 243 61 0 0 chr2 213465390 213465423 -39791160 + (CAAT)n Simple_repeat Simple_repeat 3 35 0 564 136 20 34 chr2 213465569 213465716 -39790867 + GA-rich Low_complexity Low_complexity 4 148 0 459 194 128 109 chr2 213465760 213465971 -39790612 - MER20 DNA MER1_type 0 219 5 533 356 106 27 chr2 213466548 213467148 -39789435 + L2 LINE L2 2657 3313 0 916 230 62 0 chr2 213467196 213467405 -39789178 + MER58A DNA MER1_type 3 224 0 256 321 0 71 chr2 213467522 213467690 -39788893 - MIR SINE MIR 0 262 107 2190 119 39 33 chr2 213467869 213468230 -39788353 - THE1B LTR MaLR -1 363 1 210 335 26 86 chr2 213468921 213469190 -39787393 + L2 LINE L2 2812 3064 -208 230 298 98 108 chr2 213469338 213469707 -39786876 + L2 LINE L2 2908 3272 0 237 308 131 15 chr2 213469730 213469860 -39786723 + L2 LINE L2 3122 3266 -6 257 235 157 69 chr2 213470674 213470776 -39785807 + L2 LINE L2 3201 3311 -2 1854 162 126 11 chr2 213471297 213471679 -39784904 + MSTA LTR MaLR 1 426 -2 469 295 131 27 chr2 213472315 213472719 -39783864 + MLT1K LTR MaLR 143 588 0 466 296 91 89 chr2 213474131 213474713 -39781870 + MLT1K LTR MaLR 2 584 -4 479 268 80 0 chr2 213475428 213475566 -39781017 - L1MCb LINE L1 -5326 719 571 1617 251 30 24 chr2 213475651 213476160 -39780423 - L1MCb LINE L1 -5493 552 41 23 0 0 0 chr2 213477536 213477559 -39779024 + AT_rich Low_complexity Low_complexity 1 23 0 1856 188 131 3 chr2 213478060 213478443 -39778140 - MSTB1 LTR MaLR 0 432 1 289 301 22 44 chr2 213479096 213479279 -39777304 + LTR16C LTR ERVL 303 481 -10 330 191 9 64 chr2 213479514 213479624 -39776959 - LTR33 LTR ERVL -8 513 410 716 188 39 17 chr2 213479674 213479855 -39776728 - MER53 DNA DNA 0 189 5 720 244 28 0 chr2 213479984 213480201 -39776382 - LTR33 LTR ERVL -298 223 1 663 271 0 0 chr2 213481114 213481269 -39775314 - MIR SINE MIR -18 244 90 691 259 89 70 chr2 213481277 213481706 -39774877 - MLT1J LTR MaLR -51 460 24 23 0 0 0 chr2 213481836 213481859 -39774724 + AT_rich Low_complexity Low_complexity 1 23 0 342 0 0 0 chr2 213482088 213482126 -39774457 + (A)n Simple_repeat Simple_repeat 1 38 0 338 320 72 26 chr2 213484820 213484973 -39771610 - MIR SINE MIR -102 160 1 1564 207 83 7 chr2 213487153 213487587 -39768996 - MLT1C LTR MaLR 0 467 1 2024 141 0 0 chr2 213488699 213489014 -39767569 - AluSx SINE Alu 0 315 1 383 326 61 7 chr2 213489051 213489198 -39767385 - MIR3 SINE MIR -50 158 4 187 355 0 0 chr2 213489333 213489395 -39767188 - L2 LINE L2 -4 3309 3248 2126 141 0 3 chr2 213489476 213489773 -39766810 - AluSx SINE Alu -16 296 1 206 342 123 39 chr2 213490255 213490410 -39766173 + L2 LINE L2 2433 2600 -714 233 264 218 0 chr2 213491054 213491141 -39765442 + MIR SINE MIR 129 234 -28 524 260 26 19 chr2 213492635 213492789 -39763794 + MIR SINE MIR 58 212 -50 325 290 0 30 chr2 213493155 213493255 -39763328 - L2 LINE L2 -21 3292 3196 235 244 93 0 chr2 213493875 213493961 -39762622 - L1ME4a LINE L1 -20 6101 6008 737 266 126 53 chr2 213494006 213494537 -39762046 - L1ME4a LINE L1 -195 5926 5357 434 139 0 0 chr2 213494558 213494630 -39761953 - L1PA16 LINE L1 -16 6150 6079 2343 233 45 19 chr2 213496350 213496906 -39759677 - L1ME2 LINE L1 0 6164 5624 6238 60 0 0 chr2 213496906 213497678 -39758905 + L1PA6 LINE L1 5367 6138 -16 366 23 0 0 chr2 213497681 213497724 -39758859 + (GAAAA)n Simple_repeat Simple_repeat 2 44 0 2343 233 45 19 chr2 213497724 213497859 -39758724 - L1ME2 LINE L1 -541 5623 5451 311 263 22 78 chr2 213498110 213498289 -39758294 - MIR SINE MIR -16 246 78 228 163 0 0 chr2 213500028 213500071 -39756512 + GA-rich Low_complexity Low_complexity 3 45 0 309 51 0 0 chr2 213501769 213501808 -39754775 + (A)n Simple_repeat Simple_repeat 1 39 0 952 243 63 0 chr2 213501983 213502189 -39754394 - MER20 DNA MER1_type 0 219 1 2075 108 0 4 chr2 213502193 213502472 -39754111 + AluSg SINE Alu 1 278 -32 233 0 62 0 chr2 213502474 213502506 -39754077 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 228 200 0 0 chr2 213502820 213502870 -39753713 + (TG)n Simple_repeat Simple_repeat 1 50 0 350 291 13 0 chr2 213502959 213503038 -39753545 - L2 LINE L2 -25 3247 3168 2056 173 48 48 chr2 213503135 213503598 -39752985 + LTR40c LTR ERVL 3 465 0 571 324 40 8 chr2 213503599 213503846 -39752737 + HAL1 LINE L1 1750 2004 -503 2247 104 7 0 chr2 213504092 213504389 -39752194 - AluSq SINE Alu -14 299 1 2528 35 0 0 chr2 213505045 213505357 -39751226 - AluY SINE Alu 0 312 1 678 292 133 18 chr2 213505389 213505728 -39750855 + MLT1J2 LTR MaLR 73 450 0 839 226 129 66 chr2 213505744 213506186 -39750397 + HAL1 LINE L1 2038 2507 0 488 319 98 15 chr2 213506197 213506463 -39750120 - L2 LINE L2 -1210 2104 1817 783 189 23 15 chr2 213507222 213507354 -39749229 - FLAM_C SINE Alu 0 133 1 411 276 155 6 chr2 213507671 213507845 -39748738 - MIR SINE MIR -17 245 46 216 0 0 0 chr2 213508123 213508147 -39748436 + (TG)n Simple_repeat Simple_repeat 1 24 0 459 87 0 0 chr2 213508147 213508216 -39748367 + (GA)n Simple_repeat Simple_repeat 2 70 0 2006 128 42 42 chr2 213508333 213508669 -39747914 - MER1B DNA MER1_type -1 336 1 1970 153 10 0 chr2 213508996 213509291 -39747292 - AluJb SINE Alu -12 300 3 311 184 66 0 chr2 213509604 213509680 -39746903 - MIR SINE MIR -43 219 139 24 0 0 70 chr2 213509685 213509728 -39746855 + AT_rich Low_complexity Low_complexity 1 40 0 1477 247 114 39 chr2 213509728 213510491 -39746092 - L2 LINE L2 0 3313 2449 2171 97 10 3 chr2 213510491 213510781 -39745802 + AluSx SINE Alu 12 303 -9 1477 247 114 39 chr2 213510781 213510974 -39745609 - L2 LINE L2 -864 2449 2272 448 266 32 24 chr2 213510959 213511083 -39745500 - MIR SINE MIR -126 136 12 * 279 236 34 45 chr2 213511732 213511821 -39744762 - MIR3 SINE MIR -2 206 119 2234 106 0 3 chr2 213513743 213514035 -39742548 + AluSg SINE Alu 1 291 -19 452 314 41 18 chr2 213514103 213514272 -39742311 - MIR3 SINE MIR -13 195 23 23 0 0 0 chr2 213515406 213515429 -39741154 + AT_rich Low_complexity Low_complexity 1 23 0 334 224 15 0 chr2 213515480 213515547 -39741036 - L2 LINE L2 -18 3295 3228 535 214 139 40 chr2 213515559 213515732 -39740851 - MLT1K LTR MaLR 0 588 399 2214 117 3 0 chr2 213516113 213516411 -39740172 + AluSp SINE Alu 1 299 -14 274 236 16 94 chr2 213517522 213517649 -39738934 - MIR SINE MIR -54 208 92 991 147 13 13 chr2 213517765 213517922 -39738661 - FRAM SINE Alu -12 164 8 600 252 0 27 chr2 213518455 213518602 -39737981 - MER5B DNA MER1_type 0 178 36 632 274 13 0 chr2 213518720 213518873 -39737710 - MIR SINE MIR -39 223 69 41 0 0 0 chr2 213519738 213519779 -39736804 + AT_rich Low_complexity Low_complexity 1 41 0 311 268 36 27 chr2 213519998 213520110 -39736473 - MER81 DNA DNA 0 114 2 2279 98 3 3 chr2 213520796 213521093 -39735490 + AluSx SINE Alu 1 297 -15 1971 78 67 11 chr2 213523033 213523303 -39733280 - L1PA8 LINE L1 0 6172 5888 484 250 27 14 chr2 213523698 213523846 -39732737 + MIR SINE MIR 111 260 -2 603 102 10 20 chr2 213523909 213524007 -39732576 + L1MB8 LINE L1 6070 6166 -12 246 105 0 0 chr2 213524048 213524086 -39732497 + (TTCC)n Simple_repeat Simple_repeat 3 40 0 1752 166 7 7 chr2 213524102 213524575 -39732008 - AluSx SINE Alu 0 473 1 590 161 92 23 chr2 213524824 213524954 -39731629 - MER89 LTR ERV1 -28 531 393 1443 226 28 61 chr2 213524954 213525467 -39731116 + MER39 LTR ERV1 1 562 -3 3768 129 2 28 chr2 213525471 213526012 -39730571 + MER1A DNA MER1_type 1 527 0 956 236 0 15 chr2 213526018 213526321 -39730262 - MER89 LTR ERV1 -162 397 1 2117 123 0 0 chr2 213526334 213526649 -39729934 + AluSx SINE Alu 1 315 0 2738 211 71 12 chr2 213527715 213528275 -39728308 + MLT1E LTR MaLR 1 593 0 559 150 0 150 chr2 213528784 213528871 -39727712 + L1PB1 LINE L1 6021 6077 -74 2209 81 0 4 chr2 213528871 213529142 -39727441 + AluSc SINE Alu 35 304 -5 559 150 0 150 chr2 213529142 213529207 -39727376 + L1PB1 LINE L1 6077 6150 -1 269 157 0 0 chr2 213529230 213529281 -39727302 + L1MA4A LINE L1 6242 6292 -11 778 159 45 8 chr2 213529314 213529446 -39727137 - Tigger1 DNA MER2_type -2281 137 1 226 293 52 9 chr2 213529519 213529635 -39726948 - L1M4 LINE L1 -3084 3062 2942 761 230 105 10 chr2 213532389 213532589 -39723994 + MIR SINE MIR 32 250 -12 908 168 13 13 chr2 213532591 213532746 -39723837 - FRAM SINE Alu -17 159 5 406 176 77 22 chr2 213533064 213533155 -39723428 - MIR SINE MIR -62 200 105 1888 112 26 4 chr2 213533284 213533551 -39723032 - AluSx SINE Alu -14 298 26 503 266 109 48 chr2 213533941 213534234 -39722349 - LTR16C LTR ERVL -178 313 3 728 228 86 39 chr2 213534365 213534597 -39721986 + MIR SINE MIR 6 248 -14 324 0 0 0 chr2 213535472 213535508 -39721075 + (CA)n Simple_repeat Simple_repeat 2 37 0 192 302 32 16 chr2 213535896 213535959 -39720624 - L3 LINE CR1 -377 1200 1137 689 262 39 62 chr2 213537012 213537268 -39719315 - MIR SINE MIR -4 258 9 1387 304 82 48 chr2 213537813 213538217 -39718366 + L2 LINE L2 2141 2530 -783 826 211 17 28 chr2 213538217 213538397 -39718186 - MER5B DNA MER1_type 0 178 1 1387 304 82 48 chr2 213538397 213538975 -39717608 + L2 LINE L2 2530 3171 -142 191 88 29 0 chr2 213538975 213539009 -39717574 + (TG)n Simple_repeat Simple_repeat 1 35 0 1387 304 82 48 chr2 213539009 213539151 -39717432 + L2 LINE L2 3171 3307 -6 410 183 42 92 chr2 213539393 213539535 -39717048 - MLT1J2 LTR MaLR 0 450 316 182 261 261 0 chr2 213541114 213541183 -39715400 + L2 LINE L2 3186 3272 0 572 238 106 0 chr2 213542713 213542864 -39713719 - FRAM SINE Alu -1 175 9 510 262 64 43 chr2 213545767 213545954 -39710629 - Charlie8 DNA MER1_type -2226 191 1 315 312 79 96 chr2 213546097 213546565 -39710018 - L2 LINE L2 -9 3263 2804 922 181 0 0 chr2 213547227 213547387 -39709196 - MER3 DNA MER1_type -43 166 7 365 304 16 40 chr2 213548046 213548171 -39708412 + L2 LINE L2 3150 3271 -1 2357 235 35 58 chr2 213548383 213548565 -39708018 - L1MC4a LINE L1 -1740 6068 5883 2212 111 0 19 chr2 213548565 213548881 -39707702 - AluSg SINE Alu 0 310 1 2357 235 35 58 chr2 213548881 213549478 -39707105 - L1MC4a LINE L1 -1925 5883 5307 842 179 0 0 chr2 213549517 213549651 -39706932 - AluJo SINE Alu -178 134 1 435 277 38 49 chr2 213549652 213550051 -39706532 - L1MC4a LINE L1 -865 5281 4886 794 206 126 20 chr2 213550401 213550600 -39705983 + MSTD LTR MaLR 1 220 -176 974 139 6 18 chr2 213550734 213550900 -39705683 + MSTD LTR MaLR 233 396 0 308 288 0 0 chr2 213550949 213551022 -39705561 + MIR3 SINE MIR 125 197 -11 1243 161 0 0 chr2 213552445 213552669 -39703914 - L1MA9 LINE L1 -37 6479 6256 967 185 5 16 chr2 213552671 213552855 -39703728 - AluJo SINE Alu -11 301 120 11410 164 17 55 chr2 213552855 213553666 -39702917 - L1MA9 LINE L1 -273 6243 5403 2185 110 0 43 chr2 213553666 213553992 -39702591 - AluSx SINE Alu 0 312 1 11410 164 17 55 chr2 213553992 213556548 -39700035 - L1MA9 LINE L1 -1113 5403 2973 708 223 11 0 chr2 213556598 213556773 -39699810 - L1MA9 LINE L1 -3600 2750 2574 1574 160 59 37 chr2 213556792 213557190 -39699393 - L1MA8 LINE L1 -8 6283 5878 924 253 55 2 chr2 213557222 213557684 -39698899 - L1M4 LINE L1 -3854 2528 2039 31 58 0 0 chr2 213557700 213557752 -39698831 + AT_rich Low_complexity Low_complexity 1 52 0 1241 174 97 4 chr2 213557783 213558030 -39698553 + AluSx SINE Alu 32 301 -11 3047 265 118 33 chr2 213558071 213558600 -39697983 - L1MA9 LINE L1 -4161 2190 1707 2022 132 7 0 chr2 213558600 213558904 -39697679 + AluSx SINE Alu 1 306 0 3047 265 118 33 chr2 213558904 213560432 -39696151 - L1MA9 LINE L1 -4644 1707 11 2084 110 11 0 chr2 213561191 213561493 -39695090 - AluSp SINE Alu 0 305 1 21 0 0 0 chr2 213562691 213562712 -39693871 + AT_rich Low_complexity Low_complexity 1 21 0 1303 221 52 76 chr2 213563249 213563764 -39692819 - MLT1D LTR MaLR 0 505 3 877 273 39 4 chr2 213563779 213564039 -39692544 - LTR16C LTR ERVL -55 436 168 281 320 87 0 chr2 213564171 213564321 -39692262 - MLT1K LTR MaLR -357 231 69 432 0 0 0 chr2 213564929 213564977 -39691606 + (TCTA)n Simple_repeat Simple_repeat 3 50 0 311 250 65 28 chr2 213565468 213565576 -39691007 - MIR SINE MIR -146 116 5 329 269 10 101 chr2 213565579 213565787 -39690796 - MER5A DNA MER1_type 0 189 1 263 292 108 19 chr2 213566642 213566811 -39689772 + MIR SINE MIR 17 261 -1 301 236 154 0 chr2 213566876 213566986 -39689597 - L2 LINE L2 -5 3308 3182 246 372 39 16 chr2 213567031 213567160 -39689423 - MIR SINE MIR -60 148 17 2013 147 10 0 chr2 213567962 213568255 -39688328 - AluSx SINE Alu -16 296 1 22 0 0 0 chr2 213568526 213568548 -39688035 + AT_rich Low_complexity Low_complexity 1 22 0 695 157 9 0 chr2 213568563 213568678 -39687905 - FLAM_C SINE Alu -16 117 2 216 0 0 0 chr2 213568980 213569004 -39687579 + (T)n Simple_repeat Simple_repeat 1 24 0 954 151 5 0 chr2 213569452 213569644 -39686939 + L1MA4 LINE L1 6103 6295 -5 180 125 0 0 chr2 213571691 213571723 -39684860 + (CAA)n Simple_repeat Simple_repeat 3 34 0 321 316 48 43 chr2 213574411 213574598 -39681985 - MIR SINE MIR -55 207 20 210 37 0 0 chr2 213574599 213574626 -39681957 + (TC)n Simple_repeat Simple_repeat 1 27 0 297 0 0 0 chr2 213574627 213574641 -39681942 + (CA)n Simple_repeat Simple_repeat 1 47 0 297 0 0 0 chr2 213574641 213574674 -39681909 + (CA)n Simple_repeat Simple_repeat 2 34 0 1441 192 13 66 chr2 213574703 213575020 -39681563 - AluJo SINE Alu -12 300 1 21 0 0 0 chr2 213575022 213575043 -39681540 + AT_rich Low_complexity Low_complexity 1 21 0 419 275 84 8 chr2 213575295 213575426 -39681157 - MIR SINE MIR 0 262 122 235 70 23 23 chr2 213575542 213575585 -39680998 + (GA)n Simple_repeat Simple_repeat 2 44 0 582 236 75 29 chr2 213576693 213576867 -39679716 - MIR3 SINE MIR -1 207 26 387 294 9 0 chr2 213578705 213578814 -39677769 - L3 LINE CR1 -106 1471 1362 1676 209 151 42 chr2 213578814 213579545 -39677038 - LTR1B LTR ERV1 0 1020 1 348 283 17 25 chr2 213579549 213579669 -39676914 - L3 LINE CR1 -218 1359 1241 258 32 0 0 chr2 213580126 213580157 -39676426 + (TG)n Simple_repeat Simple_repeat 2 32 0 4001 93 2 9 chr2 213580915 213581315 -39675268 - MER41A LTR ERV1 0 554 158 2252 108 0 0 chr2 213581315 213581611 -39674972 - AluSx SINE Alu -16 296 1 4001 93 2 9 chr2 213581611 213581768 -39674815 - MER41A LTR ERV1 -396 158 1 391 284 87 37 chr2 213582381 213582599 -39673984 - L3 LINE CR1 -688 889 661 451 139 0 0 chr2 213584605 213584684 -39671899 - MER53 DNA DNA -3 186 108 677 253 61 12 chr2 213585172 213585417 -39671166 + MARNA DNA Mariner 120 376 -210 2578 107 6 3 chr2 213588213 213588576 -39668007 + THE1B LTR MaLR 1 364 0 2209 108 7 3 chr2 213589105 213589411 -39667172 - AluSx SINE Alu -5 307 1 296 276 143 57 chr2 213589499 213589869 -39666714 - MLT1H LTR MaLR -28 521 120 684 110 0 0 chr2 213592478 213592578 -39664005 + AluY SINE Alu 200 299 -12 275 187 30 19 chr2 213592605 213592689 -39663894 + MIR SINE MIR 101 182 -63 1863 128 10 28 chr2 213594141 213594456 -39662127 + AluSx SINE Alu 1 310 0 2316 110 0 3 chr2 213595468 213595776 -39660807 + AluSq SINE Alu 1 307 -6 625 219 123 0 chr2 213597370 213597525 -39659058 + MER45A DNA AcHobo 1 174 -4 2392 133 63 3 chr2 213600905 213601288 -39655295 + MSTB LTR MaLR 6 411 -15 495 289 25 55 chr2 213601428 213601629 -39654954 - MLT1L LTR MaLR -362 253 59 414 231 56 75 chr2 213603346 213603506 -39653077 + MIR SINE MIR 6 162 -100 365 290 96 86 chr2 213603510 213604302 -39652281 + L2 LINE L2 2479 3267 -5 219 204 0 0 chr2 213604393 213604447 -39652136 + (TTA)n Simple_repeat Simple_repeat 2 55 0 528 146 31 10 chr2 213605484 213605580 -39651003 + MER4A LTR ERV1 1 98 -566 1906 125 5 53 chr2 213605580 213605944 -39650639 + MER4A LTR ERV1 261 664 0 572 260 73 15 chr2 213607547 213607751 -39648832 - MIR SINE MIR 0 262 47 5782 139 39 39 chr2 213608347 213608568 -39648015 - L1MA9 LINE L1 0 6312 6092 282 29 0 0 chr2 213608568 213608603 -39647980 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1958 148 0 0 chr2 213608603 213608887 -39647696 - AluSx SINE Alu -28 284 1 5782 139 39 39 chr2 213608887 213609832 -39646751 - L1MA9 LINE L1 -218 6094 5152 4603 161 32 9 chr2 213609827 213610674 -39645909 + L1MA9 LINE L1 4289 5154 -992 * 456 326 20 11 chr2 213610837 213611031 -39645552 + MIR SINE MIR 3 202 -60 452 250 6 107 chr2 213611124 213611292 -39645291 - MER104 DNA Tc2 0 180 30 2729 26 0 3 chr2 213611361 213611670 -39644913 + AluY SINE Alu 4 311 0 312 253 162 35 chr2 213612177 213612375 -39644208 - L1M2 LINE L1 -6016 833 611 656 306 113 29 chr2 213612801 213613183 -39643400 + L2 LINE L2 2899 3312 -1 197 132 26 0 chr2 213613443 213613481 -39643102 + (TAA)n Simple_repeat Simple_repeat 3 41 0 235 228 18 0 chr2 213613636 213613693 -39642890 + GA-rich Low_complexity Low_complexity 5 62 0 391 304 31 57 chr2 213614604 213614798 -39641785 - MER5A DNA MER1_type 0 189 1 1879 150 0 10 chr2 213614802 213615102 -39641481 + AluJo SINE Alu 3 299 -13 1333 198 38 11 chr2 213615180 213615485 -39641098 + MER33 DNA MER1_type 1 308 -16 252 245 112 63 chr2 213615689 213615832 -39640751 + Charlie8 DNA MER1_type 57 206 -2211 829 217 55 90 chr2 213615861 213616151 -39640432 + Zaphod DNA AcHobo 3751 4030 -1 193 250 0 0 chr2 213616151 213616199 -39640384 + L2 LINE L2 3263 3310 -3 401 258 96 71 chr2 213616881 213617079 -39639504 - MLT1I LTR MaLR -109 300 98 2136 131 7 0 chr2 213617323 213617620 -39638963 + AluSx SINE Alu 1 299 -13 292 305 21 102 chr2 213617946 213618103 -39638480 + MIR SINE MIR 27 172 -68 255 325 43 69 chr2 213618207 213618395 -39638188 - L2 LINE L2 -215 3057 2875 263 333 19 9 chr2 213618603 213618708 -39637875 - L2 LINE L2 -649 2665 2560 4630 171 13 21 chr2 213618844 213619621 -39636962 - L1MB7 LINE L1 -16 6168 5397 2192 88 0 0 chr2 213619621 213619895 -39636688 - AluSx SINE Alu -18 294 21 4630 171 13 21 chr2 213619895 213619971 -39636612 - L1MB7 LINE L1 -787 5397 5322 2682 17 0 0 chr2 213620303 213620597 -39635986 - AluYa5 SINE Alu -9 302 9 297 243 0 14 chr2 213620732 213620802 -39635781 + MIR3 SINE MIR 134 202 -6 2276 78 4 0 chr2 213621542 213621847 -39634736 + AluY SINE Alu 1 306 0 1548 164 120 22 chr2 213621920 213622195 -39634388 + AluJo SINE Alu 1 302 0 416 278 47 53 chr2 213622705 213622874 -39633709 - MIR3 SINE MIR 0 208 41 240 299 52 13 chr2 213623081 213623158 -39633425 + MER5A DNA MER1_type 110 189 0 222 195 0 0 chr2 213623408 213623449 -39633134 + (TG)n Simple_repeat Simple_repeat 2 42 0 603 320 112 18 chr2 213623461 213623899 -39632684 + L1ME LINE L1 3458 3936 -2210 236 306 10 0 chr2 213624025 213624123 -39632460 + L1ME LINE L1 3942 4040 -2106 2012 130 33 0 chr2 213624134 213624435 -39632148 + AluSx SINE Alu 1 311 -1 225 348 66 16 chr2 213624468 213624724 -39631859 + L1ME LINE L1 4067 4335 -1811 332 303 124 0 chr2 213624779 213624868 -39631715 + MER58A DNA MER1_type 2 101 -6 426 305 82 35 chr2 213624900 213625215 -39631368 + L1ME LINE L1 5318 5647 -523 244 175 17 25 chr2 213625249 213625369 -39631214 + (TA)n Simple_repeat Simple_repeat 2 120 0 2260 112 128 5 chr2 213625685 213626061 -39630522 - MSTA LTR MaLR -6 422 1 186 43 0 0 chr2 213626168 213626191 -39630392 + (TA)n Simple_repeat Simple_repeat 2 24 0 462 255 77 71 chr2 213627114 213627310 -39629273 - MIR SINE MIR -48 214 18 1292 110 0 0 chr2 213627721 213627894 -39628689 + AluSg/x SINE Alu 133 305 -7 2424 205 118 52 chr2 213628041 213628734 -39627849 + Charlie1a DNA MER1_type 1 739 -716 1213 214 65 0 chr2 213628761 213628775 -39627808 - L1ME1 LINE L1 -242 5924 5911 508 291 118 14 chr2 213628775 213629071 -39627512 - L1MA5 LINE L1 -387 5913 5587 4137 93 17 0 chr2 213629092 213629610 -39626973 + MER1A DNA MER1_type 1 527 0 445 216 174 88 chr2 213630092 213630420 -39626163 - L1ME4a LINE L1 -113 6008 5653 204 228 105 18 chr2 213630632 213630689 -39625894 - L2 LINE L2 -4 3309 3248 625 254 40 0 chr2 213630728 213630901 -39625682 - MIR SINE MIR -35 227 48 600 260 7 7 chr2 213631331 213631485 -39625098 - MER103 DNA DNA 0 166 13 300 294 117 37 chr2 213632744 213632907 -39623676 - MIR SINE MIR -79 183 8 187 271 24 59 chr2 213634692 213634777 -39621806 - L2 LINE L2 -225 3047 2966 297 0 0 0 chr2 213634904 213634937 -39621646 + (TG)n Simple_repeat Simple_repeat 2 34 0 335 323 192 4 chr2 213634961 213635190 -39621393 - L2 LINE L2 -491 2823 2552 21 0 0 0 chr2 213635251 213635272 -39621311 + AT_rich Low_complexity Low_complexity 1 21 0 874 251 99 59 chr2 213637644 213637712 -39618871 - MLT1J LTR MaLR -17 494 430 258 32 0 0 chr2 213637712 213637743 -39618840 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 874 251 99 59 chr2 213637743 213638149 -39618434 - MLT1J LTR MaLR -81 430 1 829 251 123 64 chr2 213638360 213638798 -39617785 - LTR16B LTR ERVL 0 464 1 558 79 0 0 chr2 213638806 213638882 -39617701 + (TTCC)n Simple_repeat Simple_repeat 1 76 0 204 340 37 14 chr2 213638887 213639002 -39617581 - MIR SINE MIR -90 118 8 499 305 122 0 chr2 213639401 213639565 -39617018 - MER91A DNA MER1_type -12 184 1 537 272 154 24 chr2 213640053 213640351 -39616232 - L2 LINE L2 -262 3010 2680 457 304 50 45 chr2 213640705 213640906 -39615677 - MIR SINE MIR -50 212 11 21 0 0 0 chr2 213640971 213640992 -39615591 + AT_rich Low_complexity Low_complexity 1 21 0 690 310 42 4 chr2 213642280 213642519 -39614064 - MIR SINE MIR -12 250 3 338 308 68 30 chr2 213642831 213643094 -39613489 + L1ME4a LINE L1 5528 5800 -321 1558 184 74 43 chr2 213643220 213643612 -39612971 - MLT1C LTR MaLR 0 467 64 5318 83 4 1 chr2 213643612 213644296 -39612287 + L1PB2 LINE L1 5464 6149 -2 240 164 224 0 chr2 213644316 213644383 -39612200 - MLT1C LTR MaLR -385 82 1 23 68 0 0 chr2 213644391 213644435 -39612148 + AT_rich Low_complexity Low_complexity 1 44 0 256 247 41 41 chr2 213644756 213644902 -39611681 + L1ME4a LINE L1 5974 6119 -2 255 241 65 102 chr2 213645599 213645707 -39610876 - MER91A DNA MER1_type -4 192 89 213 328 0 16 chr2 213645714 213645775 -39610808 - MER91A DNA MER1_type -28 168 109 209 240 22 44 chr2 213646100 213646242 -39610341 + (TA)n Simple_repeat Simple_repeat 2 141 -39 2144 119 0 7 chr2 213646242 213646537 -39610046 - AluSc SINE Alu -16 293 1 209 240 22 44 chr2 213646537 213646577 -39610006 + (TA)n Simple_repeat Simple_repeat 141 180 0 24 0 0 0 chr2 213646733 213646757 -39609826 + AT_rich Low_complexity Low_complexity 1 24 0 1158 228 62 49 chr2 213646886 213647255 -39609328 - MER87 LTR ERV1 0 541 168 235 191 73 29 chr2 213647386 213647454 -39609129 - L1ME LINE L1 -469 5652 5582 3935 100 130 0 chr2 213648540 213649102 -39607481 - MER41B LTR ERV1 0 635 1 337 284 85 23 chr2 213649106 213649282 -39607301 - MIR SINE MIR -12 250 64 259 288 61 0 chr2 213649863 213649929 -39606654 - L2 LINE L2 -32 3240 3171 259 319 70 65 chr2 213649964 213650149 -39606434 + MER5A DNA MER1_type 1 186 -3 432 0 0 0 chr2 213650543 213650591 -39605992 + (TG)n Simple_repeat Simple_repeat 1 48 0 238 326 0 22 chr2 213650827 213650916 -39605667 - L2 LINE L2 -43 3229 3143 2355 98 12 76 chr2 213651217 213651637 -39604946 - L1MA8 LINE L1 -5 6286 5894 239 344 46 33 chr2 213653993 213654144 -39602439 - L2 LINE L2 0 3313 3161 189 325 78 0 chr2 213654167 213654244 -39602339 - L2 LINE L2 -1008 2306 2224 1447 327 84 30 chr2 213654511 213655408 -39601175 + L3 LINE CR1 632 1576 -1 226 229 0 21 chr2 213655545 213655593 -39600990 + L2 LINE L2 3267 3313 0 213 293 0 0 chr2 213656374 213656432 -39600151 + (TG)n Simple_repeat Simple_repeat 1 58 0 2206 77 59 3 chr2 213658187 213658474 -39598109 + AluSc SINE Alu 1 303 -6 414 242 20 0 chr2 213659422 213659521 -39597062 - MIR SINE MIR -4 258 158 4264 129 15 29 chr2 213659705 213660366 -39596217 + MER39B LTR ERV1 1 652 -1 405 311 23 8 chr2 213660392 213660524 -39596059 - MIR SINE MIR -17 245 112 1920 129 69 77 chr2 213660927 213661205 -39595378 - MER7A DNA MER2_type -2692 346 72 2102 121 3 0 chr2 213661205 213661494 -39595089 + AluSq SINE Alu 1 290 -23 1920 129 69 77 chr2 213661494 213661565 -39595018 - MER7A DNA MER2_type -2966 72 2 318 302 38 45 chr2 213662465 213662652 -39593931 - MIR SINE MIR -63 145 3 244 298 12 24 chr2 213663781 213663865 -39592718 - L2 LINE L2 -8 3264 3182 293 246 216 30 chr2 213664020 213664187 -39592396 + L3b LINE CR1 1308 1505 -78 1983 150 0 17 chr2 213664187 213664487 -39592096 - AluJb SINE Alu -17 295 1 810 197 0 33 chr2 213664491 213664643 -39591940 - MER5A DNA MER1_type -6 183 37 237 349 20 47 chr2 213664834 213664983 -39591600 - MER5A DNA MER1_type -27 162 18 181 302 216 9 chr2 213665054 213665170 -39591413 + MIR3 SINE MIR 4 143 -65 2378 82 7 0 chr2 213665619 213665922 -39590661 - AluSp SINE Alu -8 305 1 2235 129 0 0 chr2 213665936 213666246 -39590337 - AluSx SINE Alu -2 310 1 2230 91 14 7 chr2 213667451 213667747 -39588836 + AluSg1 SINE Alu 1 298 -11 266 264 0 28 chr2 213668127 213668199 -39588384 + CT-rich Low_complexity Low_complexity 3 72 0 1742 213 41 17 chr2 213668281 213668699 -39587884 - MER39 LTR ERV1 -1 706 279 783 146 16 0 chr2 213668706 213668829 -39587754 + L1PA16 LINE L1 6033 6157 -9 297 209 279 0 chr2 213668890 213668976 -39587607 - MER34 LTR ERV1 -432 110 1 236 218 73 0 chr2 213669585 213669640 -39586943 + L2 LINE L2 3211 3269 -3 317 243 14 101 chr2 213669818 213669909 -39586674 - L1MC5 LINE L1 -45 7916 7841 1957 176 104 0 chr2 213669909 213670266 -39586317 - MSTD LTR MaLR -2 394 1 317 243 14 101 chr2 213670266 213670322 -39586261 - L1MC5 LINE L1 -120 7841 7782 3411 221 59 37 chr2 213670332 213671097 -39585486 - L1ME2 LINE L1 0 6233 5486 1220 126 117 5 chr2 213671097 213671311 -39585272 + L1PA16 LINE L1 5920 6157 -9 3411 221 59 37 chr2 213671311 213672350 -39584233 - L1ME2 LINE L1 -747 5486 4345 3215 250 56 37 chr2 213672345 213673848 -39582735 - L1ME2 LINE L1 -2850 3365 1848 * 2832 216 53 27 chr2 213673848 213674030 -39582553 - MER82 DNA MER2_type 0 653 477 2360 88 0 0 chr2 213674030 213674326 -39582257 - AluSg SINE Alu -14 296 1 2832 216 53 27 chr2 213674326 213674778 -39581805 - MER82 DNA MER2_type -176 477 2 3215 250 56 37 chr2 213674778 213675262 -39581321 - L1ME2 LINE L1 -4367 1848 1375 861 163 21 8 chr2 213675340 213675580 -39581003 + CT-rich Low_complexity Low_complexity 1 243 0 2189 104 17 0 chr2 213675583 213675882 -39580701 - AluSq SINE Alu -9 304 1 275 221 41 157 chr2 213675889 213676061 -39580522 - L1ME2 LINE L1 -5902 303 152 1938 202 25 3 chr2 213676412 213676769 -39579814 - MLT1A1 LTR MaLR 0 365 1 792 290 83 30 chr2 213676849 213677245 -39579338 + L2 LINE L2 2731 3156 -157 408 174 14 0 chr2 213677246 213677315 -39579268 + Tigger2 DNA MER2_type 1 70 -2648 2720 137 12 14 chr2 213677315 213677732 -39578851 + Tigger2 DNA MER2_type 2303 2718 0 1677 161 16 26 chr2 213677735 213678040 -39578543 - AluJb SINE Alu -5 307 6 255 298 86 13 chr2 213678066 213678217 -39578366 + L2 LINE L2 3152 3313 0 279 0 0 0 chr2 213678576 213678607 -39577976 + (CA)n Simple_repeat Simple_repeat 2 32 0 360 205 63 47 chr2 213679778 213679905 -39576678 - L1ME4a LINE L1 -14 6107 5979 351 243 34 17 chr2 213679929 213680007 -39576576 + (TA)n Simple_repeat Simple_repeat 1 76 -104 2160 183 11 14 chr2 213680007 213680373 -39576210 - MLT1A1 LTR MaLR 0 365 1 351 243 34 17 chr2 213680373 213680471 -39576112 + (TA)n Simple_repeat Simple_repeat 76 180 0 3853 122 23 2 chr2 213680602 213681118 -39575465 + MER1A DNA MER1_type 1 527 0 868 254 8 47 chr2 213681118 213681374 -39575209 + MIR SINE MIR 17 262 0 1753 162 156 6 chr2 213681385 213681724 -39574859 - MLT1B LTR MaLR 0 390 1 244 165 268 41 chr2 213681745 213681842 -39574741 - L1ME4a LINE L1 -364 5757 5639 313 250 50 0 chr2 213681946 213682026 -39574557 - L1MC4 LINE L1 -1346 6696 6613 210 37 0 0 chr2 213682090 213682117 -39574466 + (TTTAA)n Simple_repeat Simple_repeat 4 30 0 1028 100 0 0 chr2 213682118 213682248 -39574335 - FRAM SINE Alu -24 152 23 637 268 11 28 chr2 213682280 213682459 -39574124 - LTR16C LTR ERVL -2 489 314 534 320 140 37 chr2 213682890 213683481 -39573102 + L2 LINE L2 2243 2894 -420 318 272 22 11 chr2 213683691 213683783 -39572800 + MIR SINE MIR 104 196 -66 7332 162 53 70 chr2 213683783 213685354 -39571229 - MER52A LTR ERV1 0 1755 211 310 224 24 12 chr2 213685354 213685439 -39571144 - MER52A LTR ERV1 -1669 86 1 181 206 0 0 chr2 213685449 213685483 -39571100 + MIR SINE MIR 229 262 0 357 328 56 8 chr2 213685511 213685636 -39570947 + L2 LINE L2 3118 3248 -24 420 263 0 9 chr2 213685993 213686107 -39570476 + MER103 DNA DNA 12 124 -42 231 133 0 0 chr2 213686583 213686628 -39569955 + (T)n Simple_repeat Simple_repeat 1 45 0 383 315 35 28 chr2 213686762 213686905 -39569678 - MIR3 SINE MIR -11 197 54 213 211 0 0 chr2 213687390 213687442 -39569141 + GA-rich Low_complexity Low_complexity 1 52 0 546 281 48 33 chr2 213688364 213688574 -39568009 - MIR SINE MIR -16 246 34 217 214 0 0 chr2 213691804 213691846 -39564737 - MIR SINE MIR -77 131 90 510 339 26 9 chr2 213691963 213692196 -39564387 - MIR SINE MIR -20 242 6 745 259 113 44 chr2 213692306 213692376 -39564207 + MLT1K LTR MaLR 136 200 -388 836 241 29 6 chr2 213692376 213692550 -39564033 + MER45A DNA AcHobo 1 178 0 745 259 113 44 chr2 213692550 213692868 -39563715 + MLT1K LTR MaLR 200 588 0 729 266 132 20 chr2 213692868 213693263 -39563320 - LTR16A LTR ERVL -1 449 11 207 0 0 0 chr2 213695391 213695414 -39561169 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1133 289 58 39 chr2 213696189 213696756 -39559827 + MLT1K LTR MaLR 3 580 -8 436 258 137 34 chr2 213696793 213697026 -39559557 + MLT1J1 LTR MaLR 66 322 -124 2402 77 7 0 chr2 213697681 213697978 -39558605 - AluSg SINE Alu -11 299 1 242 271 39 94 chr2 213699515 213699696 -39556887 + MIR3 SINE MIR 31 201 -7 2766 171 75 2 chr2 213699913 213700382 -39556201 + MLT1D LTR MaLR 1 503 -2 328 316 120 15 chr2 213700415 213700548 -39556035 + L2 LINE L2 3126 3272 0 2167 117 0 3 chr2 213701746 213702037 -39554546 - AluSg SINE Alu -16 294 5 721 283 44 51 chr2 213702432 213702747 -39553836 + L2 LINE L2 3000 3312 -1 1521 180 3 57 chr2 213702914 213703230 -39553353 + AluJo SINE Alu 1 299 -13 2599 64 0 0 chr2 213704646 213704957 -39551626 - AluY SINE Alu 0 311 1 994 219 125 29 chr2 213705874 213706285 -39550298 - MLT1C LTR MaLR -2 465 18 2339 115 0 6 chr2 213706711 213707023 -39549560 - AluSq SINE Alu -3 310 1 195 42 0 0 chr2 213708189 213708213 -39548370 + (TA)n Simple_repeat Simple_repeat 2 25 0 207 231 0 77 chr2 213708553 213708618 -39547965 - L2 LINE L2 0 3313 3254 1651 177 16 35 chr2 213709075 213709391 -39547192 + AluJo SINE Alu 3 312 0 751 313 102 30 chr2 213710901 213711734 -39544849 + L2 LINE L2 2380 3278 -35 462 340 7 0 chr2 213711738 213711885 -39544698 + L2 LINE L2 2511 2658 -656 488 306 146 23 chr2 213713710 213714141 -39542442 + LTR33 LTR ERVL 21 504 -17 730 318 33 0 chr2 213715564 213715806 -39540777 - MIR SINE MIR 0 262 13 347 218 212 24 chr2 213715810 213715975 -39540608 - Charlie7 DNA MER1_type 0 2612 2417 731 286 70 13 chr2 213716294 213716595 -39539988 - LTR16C LTR ERVL 0 491 174 338 0 0 23 chr2 213717681 213717724 -39538859 + (TG)n Simple_repeat Simple_repeat 1 42 0 183 129 0 0 chr2 213717751 213717782 -39538801 + (CAGAGA)n Simple_repeat Simple_repeat 2 32 0 369 0 0 0 chr2 213718387 213718428 -39538155 + (CA)n Simple_repeat Simple_repeat 2 42 0 201 74 0 0 chr2 213719883 213719910 -39536673 + (TAA)n Simple_repeat Simple_repeat 2 28 0 24 32 0 0 chr2 213722194 213722225 -39534358 + AT_rich Low_complexity Low_complexity 1 31 0 2213 117 3 3 chr2 213723632 213723939 -39532644 - AluSx SINE Alu -5 307 1 1875 247 23 17 chr2 213724360 213724841 -39531742 + L1ME1 LINE L1 5648 6131 -35 820 158 0 0 chr2 213724841 213724974 -39531609 - FLAM_A SINE Alu 0 142 10 196 306 0 0 chr2 213728365 213728414 -39528169 + L2 LINE L2 3209 3257 -15 198 0 0 0 chr2 213728417 213728439 -39528144 + (TGAA)n Simple_repeat Simple_repeat 4 25 0 762 232 62 126 chr2 213728682 213729040 -39527543 + MER46C DNA MER2_type 3 337 -1 2335 146 42 23 chr2 213731818 213732250 -39524333 - LTR7 LTR ERV1 -10 440 1 614 213 53 58 chr2 213732251 213732439 -39524144 - MIR SINE MIR -2 260 74 * 630 183 137 116 chr2 213732436 213732677 -39523906 - MIR SINE MIR -2 260 15 292 296 0 43 chr2 213732735 213732850 -39523733 + MIR SINE MIR 153 262 0 243 286 0 55 chr2 213733169 213733260 -39523323 + MIR SINE MIR 122 207 -55 335 217 183 50 chr2 213734654 213734774 -39521809 - MLT1K LTR MaLR -6 582 447 1043 208 35 0 chr2 213735141 213735343 -39521240 + MER3 DNA MER1_type 1 209 0 269 297 20 20 chr2 213736423 213736483 -39520100 + MIR SINE MIR 113 175 -87 697 230 209 16 chr2 213736483 213736670 -39519913 + MER58A DNA MER1_type 2 224 0 269 297 20 20 chr2 213736670 213736710 -39519873 + MIR SINE MIR 174 213 -49 1029 195 47 74 chr2 213736805 213737061 -39519522 - MER21B LTR ERV1 -1 862 614 371 239 44 62 chr2 213737049 213737162 -39519421 - MER21B LTR ERV1 -752 111 1 * 2241 141 39 30 chr2 213739132 213739493 -39517090 - THE1B LTR MaLR 0 364 1 579 253 168 5 chr2 213739623 213739825 -39516758 - MIR SINE MIR 0 262 28 679 191 46 46 chr2 213740539 213740670 -39515913 + FLAM_A SINE Alu 1 131 -2 327 273 111 0 chr2 213743320 213743419 -39513164 - LTR33 LTR ERVL -194 327 218 455 222 83 14 chr2 213743519 213743663 -39512920 - LTR33 LTR ERVL -321 200 47 2016 46 21 0 chr2 213744345 213744585 -39511998 - L1PA4 LINE L1 -1 6154 5910 189 74 0 0 chr2 213745994 213746021 -39510562 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2174 132 0 0 chr2 213746024 213746320 -39510263 - AluSx SINE Alu -16 296 1 308 284 81 46 chr2 213746391 213746588 -39509995 + LTR16B LTR ERVL 4 207 -257 484 271 15 73 chr2 213746860 213747048 -39509535 + LTR16B LTR ERVL 208 377 -87 1544 102 65 0 chr2 213747048 213747264 -39509319 - MER30 DNA MER1_type 0 230 1 484 271 15 73 chr2 213747264 213747348 -39509235 + LTR16B LTR ERVL 377 464 0 22 88 0 0 chr2 213747372 213747429 -39509154 + AT_rich Low_complexity Low_complexity 1 57 0 2020 88 73 0 chr2 213747989 213748262 -39508321 + AluSc SINE Alu 1 293 -16 7526 23 0 3 chr2 213748611 213749477 -39507106 - L1P LINE L1 -1173 4973 4111 570 180 29 72 chr2 213749566 213749705 -39506878 + MLT1E2 LTR MaLR 69 201 -423 248 235 72 78 chr2 213749572 213749725 -39506858 + MLT2C2 LTR ERVL 54 205 -259 * 1510 249 70 10 chr2 213749924 213750321 -39506262 + MLT1E2 LTR MaLR 206 626 0 400 341 37 7 chr2 213751126 213751261 -39505322 + L2 LINE L2 3134 3272 0 727 327 108 49 chr2 213751323 213752133 -39504450 - L2 LINE L2 -2 3270 2509 2081 118 0 0 chr2 213752133 213752413 -39504170 + AluSx SINE Alu 1 280 -32 307 60 40 0 chr2 213752413 213752463 -39504120 + (CAAA)n Simple_repeat Simple_repeat 4 55 0 727 327 108 49 chr2 213752463 213752796 -39503787 - L2 LINE L2 -762 2510 2043 459 237 128 94 chr2 213752987 213753104 -39503479 - MER34B LTR ERV1 0 565 453 1764 185 7 0 chr2 213753104 213753401 -39503182 - AluJo SINE Alu -13 299 1 459 237 128 94 chr2 213753401 213753776 -39502807 - MER34B LTR ERV1 -112 453 6 398 263 105 74 chr2 213753897 213754182 -39502401 + MLT1J LTR MaLR 211 504 -7 264 137 0 0 chr2 213755849 213755900 -39500683 + (CA)n Simple_repeat Simple_repeat 1 51 0 2156 92 0 60 chr2 213757132 213757447 -39499136 - AluSc SINE Alu -13 296 1 234 333 141 10 chr2 213757522 213757720 -39498863 + LTR67 LTR ERVL 17 240 -317 2309 89 3 0 chr2 213759329 213759620 -39496963 + AluSp SINE Alu 1 292 -21 219 217 0 0 chr2 213759810 213759870 -39496713 + (CA)n Simple_repeat Simple_repeat 2 61 0 213 65 0 0 chr2 213761408 213761439 -39495144 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 566 250 88 0 chr2 213761610 213761758 -39494825 + MIR SINE MIR 48 208 -54 380 310 35 7 chr2 213761819 213761964 -39494619 + MIR SINE MIR 106 254 -8 242 246 44 98 chr2 213764038 213764152 -39492431 - MIR SINE MIR -63 145 92 448 221 35 117 chr2 213764212 213764357 -39492226 + MLT1G1 LTR MaLR 451 583 -12 244 231 90 60 chr2 213764823 213764957 -39491626 + MLT1K LTR MaLR 157 294 -294 396 350 7 7 chr2 213764970 213765110 -39491473 + MLT1K LTR MaLR 23 162 -387 521 284 80 55 chr2 213765386 213765611 -39490972 + MLT1K LTR MaLR 290 525 -63 189 74 0 0 chr2 213765611 213765638 -39490945 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 521 284 80 55 chr2 213765638 213765701 -39490882 + MLT1K LTR MaLR 525 585 -3 201 278 19 0 chr2 213767036 213767090 -39489493 - MIR SINE MIR -49 213 159 374 225 0 0 chr2 213767488 213767559 -39489024 - MIR SINE MIR -108 154 84 2073 144 0 0 chr2 213767663 213767969 -39488614 - AluSx SINE Alu -6 306 1 22 0 0 0 chr2 213768290 213768312 -39488271 + AT_rich Low_complexity Low_complexity 1 22 0 504 244 65 61 chr2 213770280 213770526 -39486057 - MIR SINE MIR 0 262 16 421 226 0 15 chr2 213771146 213771279 -39485304 + GA-rich Low_complexity Low_complexity 1 131 0 240 197 45 30 chr2 213771483 213771549 -39485034 + MER5B DNA MER1_type 112 178 0 2566 56 0 0 chr2 213771766 213772071 -39484512 - AluY SINE Alu -6 305 1 1421 270 48 16 chr2 213773489 213773923 -39482660 + L3b LINE CR1 1135 1582 -1 244 261 119 45 chr2 213774061 213774195 -39482388 + MIR SINE MIR 79 222 -40 414 0 0 0 chr2 213775406 213775452 -39481131 + (TA)n Simple_repeat Simple_repeat 2 47 0 274 292 128 96 chr2 213778595 213778814 -39477769 - L2 LINE L2 -9 3263 3038 532 318 88 49 chr2 213779858 213780392 -39476191 - MLT1K LTR MaLR -18 570 16 891 318 70 39 chr2 213780966 213781391 -39475192 + L1MC4a LINE L1 5264 5715 -2093 210 71 0 0 chr2 213781391 213781419 -39475164 + (TG)n Simple_repeat Simple_repeat 2 29 0 891 318 70 39 chr2 213781419 213781612 -39474971 + L1MC4a LINE L1 5715 5901 -1907 296 44 44 0 chr2 213781612 213781657 -39474926 + (TAATG)n Simple_repeat Simple_repeat 2 48 0 524 234 27 18 chr2 213781787 213781898 -39474685 + MER81 DNA DNA 3 114 0 194 369 51 6 chr2 213782623 213782799 -39473784 - L2 LINE L2 -440 2874 2691 425 289 26 42 chr2 213782810 213783000 -39473583 + MER117 DNA MER1_type 5 191 -6 2052 75 0 26 chr2 213784413 213784679 -39471904 - AluY SINE Alu -52 259 1 347 286 57 36 chr2 213784804 213784944 -39471639 + MIR SINE MIR 3 145 -117 270 293 24 12 chr2 213785023 213785105 -39471478 - L2 LINE L2 -20 3293 3211 216 0 0 0 chr2 213785832 213785856 -39470727 + (TC)n Simple_repeat Simple_repeat 1 24 0 393 204 146 0 chr2 213786426 213786529 -39470054 + L2 LINE L2 3192 3309 -4 27 29 0 0 chr2 213787213 213787247 -39469336 + AT_rich Low_complexity Low_complexity 1 34 0 554 232 99 26 chr2 213787362 213787513 -39469070 - MIR SINE MIR -15 247 86 1545 166 42 21 chr2 213787601 213787885 -39468698 - AluJb SINE Alu -20 292 3 624 154 160 6 chr2 213787889 213788041 -39468542 - MER5A DNA MER1_type -7 182 4 2357 97 0 3 chr2 213788445 213788753 -39467830 - AluY SINE Alu -2 309 3 219 350 62 0 chr2 213788824 213788921 -39467662 - L2 LINE L2 -223 3049 2947 461 232 54 97 chr2 213789039 213789224 -39467359 - MER5B DNA MER1_type 0 178 2 1113 172 16 0 chr2 213789232 213789418 -39467165 + MER5A DNA MER1_type 1 189 0 274 250 232 18 chr2 213789450 213789562 -39467021 + MER5A DNA MER1_type 48 183 -6 230 65 0 0 chr2 213792023 213792054 -39464529 - MADE1 DNA Mariner 0 80 50 1821 159 105 0 chr2 213792404 213792718 -39463865 - MER7A DNA MER2_type 0 346 2 2261 91 0 0 chr2 213792862 213793147 -39463436 + AluSc SINE Alu 1 285 -24 219 36 0 0 chr2 213793155 213793183 -39463400 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 242 287 65 65 chr2 213793402 213793734 -39462849 - L1ME4a LINE L1 -138 5983 5645 1858 160 7 0 chr2 213793737 213794037 -39462546 - AluSx SINE Alu -10 302 1 556 257 124 32 chr2 213794205 213794423 -39462160 + MIR SINE MIR 23 260 -2 309 26 0 0 chr2 213794524 213794562 -39462021 + (TCTA)n Simple_repeat Simple_repeat 4 41 0 829 190 0 0 chr2 213794621 213794742 -39461841 + FLAM_A SINE Alu 1 121 -12 21 0 0 0 chr2 213795161 213795182 -39461401 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 213795489 213795510 -39461073 + AT_rich Low_complexity Low_complexity 1 21 0 433 309 116 13 chr2 213795620 213795853 -39460730 + MIR SINE MIR 3 259 -3 548 267 71 48 chr2 213795860 213796070 -39460513 + MIR SINE MIR 14 228 -34 375 130 49 0 chr2 213796116 213796239 -39460344 + (TA)n Simple_repeat Simple_repeat 2 130 0 252 0 0 0 chr2 213796690 213796718 -39459865 + (CA)n Simple_repeat Simple_repeat 1 28 0 456 307 80 19 chr2 213798594 213798806 -39457777 + MLT1L LTR MaLR 201 425 -190 2345 275 81 71 chr2 213799836 213800519 -39456064 + HAL1b LINE L1 1 676 -672 1342 163 173 10 chr2 213800519 213800814 -39455769 - MER2 DNA MER2_type -1 343 1 2345 275 81 71 chr2 213800814 213801686 -39454897 + HAL1b LINE L1 676 501 -847 2369 77 13 7 chr2 213801686 213801996 -39454587 + AluSp SINE Alu 1 312 -1 2345 275 81 71 chr2 213801996 213802217 -39454366 + HAL1b LINE L1 500 717 -631 206 329 0 14 chr2 213802312 213802382 -39454201 + GA-rich Low_complexity Low_complexity 1 69 0 492 244 147 6 chr2 213802479 213802635 -39453948 - MER5B DNA MER1_type 0 178 1 2359 70 10 3 chr2 213802877 213803179 -39453404 + AluY SINE Alu 1 304 -7 302 125 36 0 chr2 213803264 213803320 -39453263 + GA-rich Low_complexity Low_complexity 3 60 0 22 35 0 0 chr2 213803491 213803520 -39453063 + AT_rich Low_complexity Low_complexity 1 29 0 810 248 97 1 chr2 214003680 214003917 -39252666 - L1MC/D LINE L1 -368 5796 5563 358 256 85 47 chr2 214004351 214004480 -39252103 + MIR SINE MIR 20 153 -109 1767 65 32 32 chr2 214004487 214004529 -39252054 - L1P LINE L1 -1866 4280 4239 2260 116 0 3 chr2 214004529 214004831 -39251752 - AluSq SINE Alu -12 301 1 1767 65 32 32 chr2 214004831 214005035 -39251548 - L1P LINE L1 -1906 4240 4034 186 43 0 0 chr2 214005035 214005058 -39251525 + (ATTG)n Simple_repeat Simple_repeat 4 26 0 4665 168 13 62 chr2 214005089 214005357 -39251226 - L1 LINE L1 -1635 5213 4934 1522 186 29 42 chr2 214005357 214005669 -39250914 - AluJo SINE Alu -4 308 1 4665 168 13 62 chr2 214005669 214006000 -39250583 - L1 LINE L1 -1914 4934 4588 2231 97 0 0 chr2 214006000 214006289 -39250294 - AluY SINE Alu -22 289 1 4665 168 13 62 chr2 214006289 214006738 -39249845 - L1 LINE L1 -2260 4588 4215 2814 209 18 51 chr2 214006723 214007433 -39249150 - L1 LINE L1 -4918 1931 1245 * 242 274 11 42 chr2 214007831 214007926 -39248657 + MER94 DNA DNA 39 130 -4 1078 237 149 25 chr2 214008246 214008643 -39247940 + MLT1C LTR MaLR 22 467 0 537 233 7 180 chr2 214010516 214010613 -39245970 + MIR SINE MIR 2 114 -148 790 96 22 201 chr2 214010613 214010842 -39245741 - MER53 DNA DNA -1 188 1 537 233 7 180 chr2 214010842 214010929 -39245654 + MIR SINE MIR 114 123 -139 1640 186 7 10 chr2 214010929 214011219 -39245364 + AluJo SINE Alu 1 289 -23 537 233 7 180 chr2 214011219 214011316 -39245267 + MIR SINE MIR 123 235 -27 243 254 0 15 chr2 214013106 214013173 -39243410 - MLT1G1 LTR MaLR 0 595 530 609 285 33 70 chr2 214013242 214013558 -39243025 - MLT1G1 LTR MaLR -246 349 2 569 290 149 9 chr2 214013992 214014213 -39242370 + MIR SINE MIR 11 262 0 1782 165 152 57 chr2 214014244 214014686 -39241897 + MLT1D LTR MaLR 22 505 0 436 269 90 42 chr2 214016257 214016799 -39239784 + L1M4 LINE L1 4303 4870 -1276 310 276 111 72 chr2 214016817 214017204 -39239379 - MLT1J LTR MaLR 0 511 110 473 311 6 17 chr2 214017207 214017387 -39239196 + (TGGA)n Simple_repeat Simple_repeat 3 180 0 1817 143 0 7 chr2 214017388 214017682 -39238901 + L1MA8 LINE L1 5996 6287 -4 3650 215 40 11 chr2 214017815 214018555 -39238028 + MER45B DNA AcHobo 3 764 -276 2525 198 102 63 chr2 214018570 214019725 -39236858 + L1M4 LINE L1 631 1947 -4699 3371 227 54 13 chr2 214019731 214019891 -39236692 + L1M4 LINE L1 2193 2345 -4299 7431 64 0 37 chr2 214019891 214021641 -39234942 - L1PA7 LINE L1 -4 6150 4432 3371 227 54 13 chr2 214021641 214022565 -39234018 + L1M4 LINE L1 2345 3339 -3305 1687 184 10 10 chr2 214022565 214022869 -39233714 + AluJo SINE Alu 1 304 -8 3371 227 54 13 chr2 214022869 214023026 -39233557 + L1M4 LINE L1 3339 3488 -3156 258 278 174 0 chr2 214023113 214023228 -39233355 - MIR SINE MIR -56 152 18 183 299 75 0 chr2 214023413 214023480 -39233103 - L2 LINE L2 -15 3257 3186 1178 277 28 13 chr2 214024496 214024893 -39231690 - MLT1I LTR MaLR 0 409 7 293 152 0 0 chr2 214025291 214025337 -39231246 - Charlie8 DNA MER1_type -990 1427 1382 263 329 44 44 chr2 214025430 214025567 -39231016 - Charlie8 DNA MER1_type -2280 137 1 743 255 106 17 chr2 214026000 214026235 -39230348 + MIR SINE MIR 3 258 -4 943 238 105 24 chr2 214026732 214027026 -39229557 + MLT1J LTR MaLR 1 318 -193 1714 176 84 25 chr2 214027090 214027483 -39229100 + Charlie1 DNA MER1_type 2343 2758 -3 242 240 31 42 chr2 214027551 214027647 -39228936 + MLT1J LTR MaLR 416 510 -1 184 171 29 0 chr2 214028631 214028666 -39227917 + L2 LINE L2 3182 3217 -55 240 111 0 0 chr2 214029296 214029332 -39227251 + (TG)n Simple_repeat Simple_repeat 2 37 0 208 159 114 0 chr2 214029436 214029480 -39227103 + L2 LINE L2 3222 3270 -2 433 284 21 28 chr2 214029534 214029675 -39226908 - MIR3 SINE MIR -67 141 2 289 335 116 6 chr2 214029709 214029882 -39226701 + L2 LINE L2 3101 3292 -21 184 302 151 0 chr2 214030031 214030137 -39226446 + L2 LINE L2 3101 3222 -91 603 181 80 14 chr2 214030190 214030328 -39226255 - LTR33A LTR ERVL -6 517 371 1565 217 4 0 chr2 214031007 214031288 -39225295 - AluJo SINE Alu -30 282 1 318 251 63 75 chr2 214031724 214031963 -39224620 + L1MC4 LINE L1 7807 8042 0 189 0 0 0 chr2 214032000 214032021 -39224562 + (TA)n Simple_repeat Simple_repeat 1 21 0 2163 68 57 7 chr2 214032021 214032322 -39224261 - AluSc SINE Alu 0 309 1 732 237 54 26 chr2 214032844 214033244 -39223339 - LTR33 LTR ERVL -2 519 45 396 0 0 0 chr2 214033506 214033550 -39223033 + (TC)n Simple_repeat Simple_repeat 1 44 0 24 0 0 0 chr2 214034061 214034085 -39222498 + AT_rich Low_complexity Low_complexity 1 24 0 665 307 18 40 chr2 214034185 214034462 -39222121 - MLT1K LTR MaLR -5 583 313 2077 120 0 0 chr2 214034707 214034982 -39221601 + AluSx SINE Alu 1 275 -37 23 0 0 0 chr2 214034991 214035014 -39221569 + AT_rich Low_complexity Low_complexity 1 23 0 20601 83 7 6 chr2 214035286 214038113 -39218470 - L1PA7 LINE L1 -1833 4313 1483 2182 86 3 0 chr2 214038103 214038407 -39218176 + L1PA7 LINE L1 4330 4634 -1512 * 1173 36 0 0 chr2 214038416 214038555 -39218028 - AluY SINE Alu 0 311 173 7317 64 9 1 chr2 214038555 214040066 -39216517 + L1PA7 LINE L1 4629 6141 -13 1516 94 0 0 chr2 214040846 214041038 -39215545 + AluY SINE Alu 1 192 -119 336 67 0 0 chr2 214041038 214041083 -39215500 + AluY SINE Alu 255 299 -3 843 122 0 0 chr2 214041602 214041733 -39214850 + (GGGGA)n Simple_repeat Simple_repeat 2 132 0 231 114 0 0 chr2 214041751 214041786 -39214797 + (GA)n Simple_repeat Simple_repeat 2 36 0 581 234 262 36 chr2 214041804 214042189 -39214394 - LTR33 LTR ERVL -6 515 44 200 161 0 0 chr2 214045519 214045550 -39211033 + MIR SINE MIR 119 149 -113 907 257 32 48 chr2 214046083 214046332 -39210251 + MIR SINE MIR 2 246 -16 207 100 0 0 chr2 214046552 214046582 -39210001 + (CA)n Simple_repeat Simple_repeat 2 31 0 879 178 28 44 chr2 214046582 214046762 -39209821 + MER20 DNA MER1_type 39 215 -4 249 83 0 0 chr2 214047090 214047126 -39209457 + (CA)n Simple_repeat Simple_repeat 1 36 0 685 231 38 24 chr2 214047955 214048167 -39208416 - LTR16C LTR ERVL 0 491 277 541 291 72 42 chr2 214048898 214049204 -39207379 + MER102a DNA MER1_type 16 330 0 2425 55 0 52 chr2 214051048 214051374 -39205209 + AluY SINE Alu 1 309 -2 996 189 0 0 chr2 214052189 214052358 -39204225 - FRAM SINE Alu -12 164 1 397 313 164 49 chr2 214053224 214054003 -39202580 + L2 LINE L2 261 949 -2365 3609 108 87 59 chr2 214054003 214054649 -39201934 + MER4A LTR ERV1 1 664 0 397 313 164 49 chr2 214054649 214055123 -39201460 + L2 LINE L2 949 1658 -1656 570 299 49 17 chr2 214055273 214055561 -39201022 - L1MC4a LINE L1 -1762 6046 5750 2197 285 125 34 chr2 214055582 214056957 -39199626 + L2 LINE L2 1698 3271 -42 439 165 18 18 chr2 214058498 214058607 -39197976 + (CATATA)n Simple_repeat Simple_repeat 4 112 0 4115 78 13 2 chr2 214059081 214059629 -39196954 + MER41A LTR ERV1 1 554 0 209 222 14 28 chr2 214059653 214059725 -39196858 + CT-rich Low_complexity Low_complexity 3 73 0 320 348 57 51 chr2 214061541 214061995 -39194588 - L1MC4a LINE L1 -338 5783 5327 1032 259 17 0 chr2 214062138 214062370 -39194213 + MIR SINE MIR 1 236 -26 246 57 0 0 chr2 214062963 214062998 -39193585 - HSMAR1 DNA Mariner -1251 36 2 705 239 83 43 chr2 214064338 214064555 -39192028 + MIR SINE MIR 15 240 -22 213 273 0 0 chr2 214064581 214064625 -39191958 + MIR SINE MIR 219 262 0 22 0 0 0 chr2 214065287 214065309 -39191274 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr2 214065506 214065533 -39191050 + AT_rich Low_complexity Low_complexity 1 27 0 315 323 15 15 chr2 214065837 214065970 -39190613 - L3 LINE CR1 -300 1277 1145 1788 145 58 36 chr2 214067441 214067806 -39188777 - THE1C LTR MaLR 0 375 3 249 310 50 50 chr2 214067817 214067917 -39188666 + MER5A DNA MER1_type 70 169 -20 496 337 17 35 chr2 214067992 214068164 -39188419 - MER5B DNA MER1_type 0 178 10 2389 143 42 9 chr2 214068172 214068626 -39187957 + L1MB4 LINE L1 5706 6174 -6 195 345 87 68 chr2 214068659 214068864 -39187719 + L2 LINE L2 2805 3013 -259 518 289 17 33 chr2 214068864 214069044 -39187539 + MER5B DNA MER1_type 1 177 -1 392 308 154 0 chr2 214069057 214069213 -39187370 + MER5A DNA MER1_type 9 188 -1 254 356 82 7 chr2 214069567 214069713 -39186870 - MIR SINE MIR -80 182 26 262 176 20 0 chr2 214070789 214070840 -39185743 - MER81 DNA DNA 0 114 63 292 273 61 76 chr2 214071092 214071224 -39185359 + MER91B DNA MER1_type 1 130 -60 446 265 20 0 chr2 214071238 214071340 -39185243 + MER91B DNA MER1_type 87 190 0 903 236 28 0 chr2 214072900 214073082 -39183501 - MER5A DNA MER1_type -2 187 1 778 271 57 0 chr2 214073083 214073327 -39183256 + MIR SINE MIR 3 260 -2 2223 128 0 3 chr2 214073469 214073773 -39182810 - AluSx SINE Alu -9 303 1 256 224 52 0 chr2 214073822 214073880 -39182703 - MER2 DNA MER2_type -5 340 280 938 151 11 17 chr2 214073922 214074101 -39182482 - MER2 DNA MER2_type -135 210 33 697 225 122 9 chr2 214075144 214075357 -39181226 - LTR16C LTR ERVL 0 491 255 810 329 65 7 chr2 214075390 214075822 -39180761 + LTR16B LTR ERVL 8 464 0 218 257 307 10 chr2 214077722 214077823 -39178760 + MIR3 SINE MIR 15 145 -63 276 284 74 0 chr2 214077896 214077977 -39178606 + L2 LINE L2 3186 3272 0 1231 159 105 11 chr2 214078699 214078976 -39177607 + L1MC2 LINE L1 6034 6336 -8 254 273 117 56 chr2 214079981 214080212 -39176371 + Charlie7 DNA MER1_type 7 251 -2361 305 270 18 14 chr2 214080272 214080451 -39176132 + L1P4 LINE L1 5256 5442 -724 1917 136 0 33 chr2 214080959 214081260 -39175323 + AluJo SINE Alu 1 291 -21 664 332 144 35 chr2 214081653 214082009 -39174574 - L3 LINE CR1 -225 1352 910 270 106 0 0 chr2 214082009 214082056 -39174527 + (TG)n Simple_repeat Simple_repeat 2 48 0 664 332 144 35 chr2 214082056 214082268 -39174315 - L3 LINE CR1 -667 910 722 1302 225 173 15 chr2 214082272 214082747 -39173836 - MLT1F1 LTR MaLR -13 554 5 668 269 70 0 chr2 214082808 214082994 -39173589 + MIR SINE MIR 46 244 -18 2830 6 0 3 chr2 214083640 214083952 -39172631 - AluYa5 SINE Alu 0 311 1 722 83 8 25 chr2 214084078 214084199 -39172384 + L1MA3 LINE L1 5911 6029 -276 2679 80 3 8 chr2 214084214 214084591 -39171992 - L1PB1 LINE L1 0 6151 5777 217 294 0 0 chr2 214084595 214084646 -39171937 - MIR SINE MIR -102 160 110 21 0 0 0 chr2 214085725 214085746 -39170837 + AT_rich Low_complexity Low_complexity 1 21 0 536 256 5 41 chr2 214086025 214086220 -39170363 - L1ME3A LINE L1 -222 5948 5761 704 282 86 44 chr2 214087285 214087831 -39168752 - L1ME4a LINE L1 -17 6104 5536 274 231 0 0 chr2 214087860 214087925 -39168658 + MLT1H LTR MaLR 13 77 -472 544 233 0 67 chr2 214088126 214088306 -39168277 + MLT1H LTR MaLR 382 549 0 281 290 40 30 chr2 214088387 214088487 -39168096 - MIR SINE MIR -109 153 53 738 184 35 7 chr2 214088534 214088675 -39167908 - MER58A DNA MER1_type -31 193 49 252 59 0 0 chr2 214088791 214088825 -39167758 + (CA)n Simple_repeat Simple_repeat 1 34 0 187 197 211 42 chr2 214088866 214088937 -39167646 - MIR3 SINE MIR -23 185 103 210 91 0 0 chr2 214089159 214089192 -39167391 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 518 306 83 5 chr2 214089397 214089590 -39166993 + MIR SINE MIR 20 227 -35 346 307 158 0 chr2 214089617 214089731 -39166852 - L2 LINE L2 -34 3238 3107 261 0 0 0 chr2 214089812 214089841 -39166742 + (TG)n Simple_repeat Simple_repeat 2 30 0 222 302 188 0 chr2 214089889 214089985 -39166598 + L2 LINE L2 3190 3303 -10 187 254 16 48 chr2 214090165 214090228 -39166355 + MIR SINE MIR 49 109 -153 343 271 24 0 chr2 214090264 214090349 -39166234 + MIR SINE MIR 12 98 -164 479 316 110 16 chr2 214090350 214090714 -39165869 - LTR16C LTR ERVL -4 487 90 638 281 45 44 chr2 214090856 214091153 -39165430 + L1MC4 LINE L1 7490 7896 -146 2137 148 27 68 chr2 214091158 214091201 -39165382 + MSTB LTR MaLR 1 44 -382 3658 82 11 15 chr2 214091201 214091724 -39164859 + L1PA11 LINE L1 5652 6172 -2 2137 148 27 68 chr2 214091724 214092119 -39164464 + MSTB LTR MaLR 44 421 -5 270 0 0 0 chr2 214092121 214092151 -39164432 + (CA)n Simple_repeat Simple_repeat 2 31 0 2354 92 0 0 chr2 214092233 214092539 -39164044 - AluY SINE Alu -5 306 1 1307 271 46 25 chr2 214094606 214095038 -39161545 - LTR33 LTR ERVL 0 521 81 211 324 162 0 chr2 214095377 214095482 -39161101 - L2 LINE L2 0 3272 3151 211 402 9 18 chr2 214095843 214095955 -39160628 + MIR3 SINE MIR 10 120 -88 230 273 39 0 chr2 214095988 214096065 -39160518 + MIR SINE MIR 122 201 -61 407 282 10 19 chr2 214096509 214096612 -39159971 + MIR SINE MIR 45 146 -116 300 284 74 40 chr2 214096909 214097057 -39159526 + MIR SINE MIR 109 261 -1 2460 178 34 53 chr2 214097880 214098404 -39158179 - MLT2B2 LTR ERVL 0 515 2 247 254 0 0 chr2 214098586 214098649 -39157934 - MLT2E LTR ERVL -528 100 38 309 280 32 89 chr2 214098706 214098863 -39157720 - MIR SINE MIR -31 231 84 2494 81 3 0 chr2 214099297 214099607 -39156976 - AluY SINE Alu 0 311 1 319 305 187 51 chr2 214100322 214100815 -39155768 + L2 LINE L2 1181 1605 -1709 2165 114 0 0 chr2 214100815 214101126 -39155457 - AluSx SINE Alu 0 311 1 319 305 187 51 chr2 214101126 214101679 -39154904 + L2 LINE L2 1605 2371 -943 2348 184 34 0 chr2 214101680 214102092 -39154491 - MSTB LTR MaLR 0 426 1 239 279 29 48 chr2 214102226 214102330 -39154253 - MIR SINE MIR 0 262 161 2075 139 114 64 chr2 214102332 214102798 -39153785 + MLT1D LTR MaLR 1 489 -16 626 224 33 26 chr2 214102801 214102953 -39153630 - MIR SINE MIR -104 158 6 829 274 62 47 chr2 214103007 214103408 -39153175 + LTR33 LTR ERVL 113 519 -2 658 246 62 31 chr2 214104512 214104707 -39151876 - MIR SINE MIR -38 224 24 41 48 0 0 chr2 214105796 214105858 -39150725 + AT_rich Low_complexity Low_complexity 1 62 0 1796 137 4 0 chr2 214106032 214106295 -39150288 - AluSq SINE Alu -49 264 1 555 280 95 20 chr2 214106627 214107063 -39149520 + LTR33 LTR ERVL 1 521 0 423 297 54 0 chr2 214107747 214107858 -39148725 + L2 LINE L2 3197 3313 0 1595 159 33 36 chr2 214107907 214108208 -39148375 - AluJo SINE Alu -12 300 1 2097 144 58 19 chr2 214108538 214108899 -39147684 + THE1C LTR MaLR 1 375 0 707 296 93 55 chr2 214109237 214109636 -39146947 - LTR16A LTR ERVL -6 444 31 4511 145 3 40 chr2 214109681 214110414 -39146169 - MER39 LTR ERV1 -1 706 1 442 175 21 21 chr2 214110666 214110763 -39145820 - AluJ/FRAM SINE Alu 0 312 216 914 235 42 50 chr2 214112474 214112831 -39143752 + LTR33A LTR ERVL 169 522 -1 498 302 65 36 chr2 214113433 214113741 -39142842 + L2 LINE L2 2091 2407 -907 2430 99 0 0 chr2 214113771 214114083 -39142500 - AluSx SINE Alu 0 312 1 305 287 40 47 chr2 214114251 214114401 -39142182 + L2 LINE L2 2826 2974 -339 267 255 0 0 chr2 214114704 214114755 -39141828 + L2 LINE L2 2703 2753 -561 2031 152 0 0 chr2 214114929 214115226 -39141357 + AluSx SINE Alu 1 297 -15 497 250 175 12 chr2 214115295 214115455 -39141128 + MIR3 SINE MIR 16 201 -7 513 303 14 0 chr2 214117925 214118067 -39138516 + MIR SINE MIR 6 149 -113 535 304 5 33 chr2 214118079 214118293 -39138290 + MLT1K LTR MaLR 363 570 -18 22 0 0 0 chr2 214118390 214118412 -39138171 + AT_rich Low_complexity Low_complexity 1 22 0 264 276 100 23 chr2 214118574 214118758 -39137825 + MIR SINE MIR 17 216 -46 194 269 11 75 chr2 214118958 214119051 -39137532 + MIR3 SINE MIR 120 206 -2 22 35 0 0 chr2 214119437 214119466 -39137117 + GC_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr2 214119566 214119595 -39136988 + GC_rich Low_complexity Low_complexity 1 29 0 321 226 145 40 chr2 214119706 214119830 -39136753 - L1MDb LINE L1 -5718 691 555 436 257 171 0 chr2 214120341 214120481 -39136102 + MER5A DNA MER1_type 26 189 0 191 260 14 55 chr2 214120417 214120490 -39136093 - MER5A DNA MER1_type -114 75 6 * 696 209 167 19 chr2 214122356 214122566 -39134017 - MIR SINE MIR -10 252 12 734 229 0 58 chr2 214123477 214123665 -39132918 - MER5B DNA MER1_type 0 178 2 2210 144 30 3 chr2 214124101 214124434 -39132149 + MER2 DNA MER2_type 1 342 -2 333 0 0 0 chr2 214124434 214124471 -39132112 + (TG)n Simple_repeat Simple_repeat 2 38 0 790 256 29 41 chr2 214125147 214125389 -39131194 + Charlie8 DNA MER1_type 4 242 -2175 911 191 112 0 chr2 214125929 214126117 -39130466 + MER3 DNA MER1_type 1 209 0 1802 235 5 5 chr2 214126514 214126944 -39129639 - L1PB1 LINE L1 -987 5159 4730 5736 106 54 8 chr2 214126945 214127559 -39129024 + L1PB1 LINE L1 5159 5744 -407 216 0 0 0 chr2 214127559 214127583 -39129000 + (TG)n Simple_repeat Simple_repeat 2 25 0 * 855 127 0 0 chr2 214127582 214127732 -39128851 + (TA)n Simple_repeat Simple_repeat 1 150 0 5736 106 54 8 chr2 214127583 214128071 -39128512 + L1PB1 LINE L1 5744 6151 0 1609 303 129 15 chr2 214128084 214128818 -39127765 + L2 LINE L2 1999 2816 -498 2967 172 29 34 chr2 214128824 214129298 -39127285 + MER68 LTR ERV1 1 473 -89 2153 118 3 0 chr2 214129298 214129587 -39126996 + AluSx SINE Alu 1 290 -22 2967 172 29 34 chr2 214129587 214129670 -39126913 + MER68 LTR ERV1 473 555 -7 875 308 87 32 chr2 214129685 214130146 -39126437 + L2 LINE L2 2826 3311 -2 359 241 63 25 chr2 214130173 214130369 -39126214 - MLT1H1 LTR MaLR 0 555 313 181 394 39 0 chr2 214130495 214130599 -39125984 - L2 LINE L2 -217 3055 2948 242 320 183 32 chr2 214131160 214131504 -39125079 + L2 LINE L2 2174 2569 -745 206 347 84 21 chr2 214131505 214131600 -39124983 + L2 LINE L2 3163 3263 -9 9759 60 6 1 chr2 214132275 214134217 -39122366 + L1PA6 LINE L1 4198 6148 -6 496 229 216 9 chr2 214135371 214135589 -39120994 + LTR33 LTR ERVL 4 266 -255 2424 76 0 3 chr2 214135616 214135918 -39120665 - AluSq SINE Alu -12 301 1 428 262 128 0 chr2 214136118 214136267 -39120316 + MER112 DNA MER1_type 87 254 -6 25 31 0 0 chr2 214136832 214136864 -39119719 + AT_rich Low_complexity Low_complexity 1 32 0 1567 209 121 31 chr2 214136992 214137239 -39119344 - MLT1C LTR MaLR -7 460 237 494 31 16 0 chr2 214137239 214137303 -39119280 + (TC)n Simple_repeat Simple_repeat 2 66 0 1567 209 121 31 chr2 214137303 214137477 -39119106 - MLT1C LTR MaLR -230 237 1 2416 67 0 3 chr2 214137796 214138095 -39118488 - AluY SINE Alu -13 298 1 1910 164 85 30 chr2 214138444 214138915 -39117668 - Charlie1 DNA MER1_type -1 2760 2264 1691 217 38 45 chr2 214138921 214139340 -39117243 - MLT1E LTR MaLR -47 546 131 6216 197 97 53 chr2 214139340 214140903 -39115680 - Charlie1 DNA MER1_type -489 2272 780 2208 101 3 7 chr2 214140903 214141199 -39115384 - AluSx SINE Alu -15 297 3 6216 197 97 53 chr2 214141199 214141227 -39115356 - Charlie1 DNA MER1_type -1981 780 755 4125 150 50 4 chr2 214141227 214141933 -39114650 - L1MB3 LINE L1 0 6183 5446 6216 197 97 53 chr2 214141933 214142081 -39114502 - Charlie1 DNA MER1_type -2006 755 455 414 289 63 14 chr2 214142065 214142207 -39114376 - Charlie1 DNA MER1_type -2611 150 2 * 2067 138 7 0 chr2 214142694 214142992 -39113591 + AluSx SINE Alu 1 300 -12 215 294 28 64 chr2 214145213 214145322 -39111261 + MIR SINE MIR 20 124 -84 209 277 43 99 chr2 214145644 214145785 -39110798 + L2 LINE L2 3179 3311 -2 292 316 139 72 chr2 214146768 214147005 -39109578 - L2 LINE L2 0 3272 3020 510 308 118 5 chr2 214148553 214148764 -39107819 + MIR SINE MIR 2 236 -26 980 249 14 0 chr2 214151260 214151481 -39105102 - MIR SINE MIR -3 259 36 1471 182 43 36 chr2 214151587 214151889 -39104694 - AluJo SINE Alu -8 304 1 965 224 33 9 chr2 214151941 214152155 -39104428 + MER20 DNA MER1_type 1 219 0 306 0 0 0 chr2 214153138 214153172 -39103411 + (CAT)n Simple_repeat Simple_repeat 2 35 0 324 278 90 0 chr2 214153191 214153324 -39103259 - MIR SINE MIR 0 262 118 24 0 0 0 chr2 214155476 214155500 -39101083 + AT_rich Low_complexity Low_complexity 1 24 0 496 273 71 80 chr2 214155619 214155857 -39100726 - MIR SINE MIR -12 250 15 339 299 128 24 chr2 214155856 214156067 -39100516 + MIR SINE MIR 21 253 -9 * 1485 12 0 0 chr2 214156822 214156992 -39099591 - L1P1 LINE L1 -671 5484 5315 * 2727 0 0 0 chr2 214156990 214157282 -39099301 + L1P1 LINE L1 5486 5777 -378 5951 9 0 0 chr2 214156992 214157660 -39098923 + L1PA2 LINE L1 5486 6155 0 216 266 43 43 chr2 214157696 214157790 -39098793 + MER5A DNA MER1_type 12 105 -84 477 172 13 108 chr2 214158400 214158557 -39098026 - Charlie1 DNA MER1_type -2421 340 199 580 255 7 28 chr2 214158570 214158715 -39097868 - MER5B DNA MER1_type 0 178 37 337 302 101 50 chr2 214158694 214158833 -39097750 - MIR3 SINE MIR -33 175 30 * 1007 244 102 43 chr2 214158839 214159212 -39097371 - LTR33A LTR ERVL -28 495 101 1703 164 16 35 chr2 214159349 214159660 -39096923 - AluJo SINE Alu -2 310 6 24 67 0 0 chr2 214159806 214159851 -39096732 + AT_rich Low_complexity Low_complexity 1 45 0 237 360 54 0 chr2 214160445 214160556 -39096027 - MIR SINE MIR -61 147 31 1674 136 130 27 chr2 214161736 214162066 -39094517 + THE1B LTR MaLR 1 364 0 182 277 43 21 chr2 214162812 214162859 -39093724 - L3 LINE CR1 -32 1545 1498 197 376 37 12 chr2 214163320 214163482 -39093101 - L2 LINE L2 -418 2896 2731 1398 188 105 31 chr2 214164069 214164394 -39092189 - MLT1A1 LTR MaLR 0 365 17 2020 156 31 44 chr2 214166620 214167076 -39089507 - L1MB8 LINE L1 0 6178 5729 211 309 36 0 chr2 214167413 214167468 -39089115 + L2 LINE L2 3205 3261 -11 282 316 103 17 chr2 214168486 214168603 -39087980 - MIR SINE MIR -108 154 28 283 216 144 65 chr2 214169930 214170069 -39086514 - L2 LINE L2 0 3313 3164 1989 90 41 0 chr2 214170668 214170934 -39085649 + AluSp SINE Alu 1 277 -36 351 60 0 0 chr2 214170935 214170985 -39085598 + (TC)n Simple_repeat Simple_repeat 2 51 0 24 0 0 0 chr2 214170985 214171009 -39085574 + AT_rich Low_complexity Low_complexity 1 24 0 217 219 24 0 chr2 214171652 214171693 -39084890 - MIR SINE MIR -126 82 41 201 264 132 0 chr2 214171711 214171764 -39084819 + L2 LINE L2 3254 3313 0 268 200 88 56 chr2 214172279 214172404 -39084179 - L1ME4a LINE L1 -15 6106 5978 919 243 18 31 chr2 214172414 214172640 -39083943 + MIR SINE MIR 29 251 -11 302 340 63 23 chr2 214172661 214172964 -39083619 - L1ME4a LINE L1 -313 5808 5494 6012 144 28 8 chr2 214173118 214174642 -39081941 - L1MA5A LINE L1 -48 6249 4695 24 53 0 0 chr2 214176444 214176482 -39080101 + AT_rich Low_complexity Low_complexity 1 38 0 181 39 0 269 chr2 214178001 214178053 -39078530 + L2 LINE L2 3267 3304 -9 1611 263 61 39 chr2 214178773 214179314 -39077269 - MLT1H1 LTR MaLR -2 553 1 195 382 42 42 chr2 214179384 214179575 -39077008 + L2 LINE L2 2571 2761 -553 585 284 114 5 chr2 214179619 214179830 -39076753 + MIR SINE MIR 3 236 -26 817 244 73 91 chr2 214180277 214180686 -39075897 - MLT1I LTR MaLR -7 402 1 3864 154 19 111 chr2 214183364 214184281 -39072302 - MER4D LTR ERV1 -40 832 1 1915 129 0 14 chr2 214184398 214184678 -39071905 - AluSx SINE Alu -33 279 4 271 274 63 0 chr2 214186032 214186127 -39070456 - Charlie8 DNA MER1_type -1929 488 388 278 284 101 48 chr2 214186215 214186423 -39070160 - Charlie8 DNA MER1_type -2198 219 1 30 0 0 0 chr2 214186666 214186696 -39069887 + AT_rich Low_complexity Low_complexity 1 30 0 502 280 141 25 chr2 214186726 214187122 -39069461 - HAL1 LINE L1 -49 2458 2017 1490 225 129 53 chr2 214187160 214187974 -39068609 - HAL1 LINE L1 -815 1692 817 5276 185 37 25 chr2 214188103 214188170 -39068413 - Charlie1 DNA MER1_type 0 2761 2696 968 172 155 45 chr2 214188170 214188461 -39068122 - MER33 DNA MER1_type -1 323 1 5276 185 37 25 chr2 214188461 214188589 -39067994 - Charlie1 DNA MER1_type -65 2696 2571 2435 131 78 0 chr2 214188589 214188986 -39067597 + MSTA LTR MaLR 1 428 0 5276 185 37 25 chr2 214188986 214189978 -39066605 - Charlie1 DNA MER1_type -190 2571 1559 3508 170 19 2 chr2 214190002 214190805 -39065778 + L1MC/D LINE L1 4992 5809 -524 3071 133 40 10 chr2 214191572 214192067 -39064516 - L1PA15 LINE L1 -1 6164 5655 369 292 93 38 chr2 214192285 214192510 -39064073 + MIR SINE MIR 2 240 -22 2124 117 0 3 chr2 214194034 214194324 -39062259 - AluSx SINE Alu -23 289 1 462 283 23 23 chr2 214194424 214194597 -39061986 - MLT1I LTR MaLR -236 173 1 30 59 0 0 chr2 214196578 214196629 -39059954 + AT_rich Low_complexity Low_complexity 1 51 0 266 214 155 0 chr2 214196676 214196760 -39059823 - MIR SINE MIR -105 157 61 1469 225 127 44 chr2 214197153 214197656 -39058927 - L1MD2 LINE L1 -1 6358 5814 2097 152 35 26 chr2 214197658 214198080 -39058503 - L1MB1 LINE L1 -2 6166 5741 1784 160 120 40 chr2 214198137 214198587 -39057996 + L1M3 LINE L1 5257 5742 -592 2506 200 46 10 chr2 214198587 214199198 -39057385 - L1MD2 LINE L1 -423 5819 5190 1768 130 38 82 chr2 214200899 214201291 -39055292 + THE1C LTR MaLR 1 375 0 1057 246 98 14 chr2 214201402 214201748 -39054835 - L1ME2 LINE L1 -19 6145 5771 1260 114 95 5 chr2 214201915 214202126 -39054457 - MER30 DNA MER1_type 0 230 1 241 330 19 0 chr2 214203656 214203762 -39052821 - MIR SINE MIR -9 253 146 2183 186 39 4 chr2 214204753 214205242 -39051341 - L1PA13 LINE L1 -2760 4824 4319 2373 98 3 0 chr2 214205262 214205568 -39051015 - AluSc SINE Alu -2 307 1 1733 191 51 8 chr2 214205568 214205939 -39050644 - L1PA13 LINE L1 -3930 3654 3268 1299 166 37 41 chr2 214206061 214206389 -39050194 + MSTA LTR MaLR 58 364 0 629 210 12 17 chr2 214206389 214206631 -39049952 - L1PA13 LINE L1 -5064 2520 2281 * 1686 190 48 11 chr2 214206625 214206977 -39049606 - L1PA13 LINE L1 -7216 365 1 1138 196 0 0 chr2 214206976 214207185 -39049398 - L1M2 LINE L1 -531 5781 5573 * 2894 223 58 71 chr2 214207216 214207531 -39049052 - L1MC5 LINE L1 -37 7924 7606 22 39 0 39 chr2 214207531 214207553 -39049030 + AT_rich Low_complexity Low_complexity 1 22 -27 2139 115 7 0 chr2 214207553 214207840 -39048743 + AluSx SINE Alu 1 289 -23 22 39 0 39 chr2 214207840 214207868 -39048715 + AT_rich Low_complexity Low_complexity 22 49 0 3947 88 14 20 chr2 214207870 214208458 -39048125 - L1MA1 LINE L1 -8 6294 5711 2894 223 58 71 chr2 214208458 214209429 -39047154 - L1MC5 LINE L1 -356 7605 6601 292 163 138 25 chr2 214209753 214209833 -39046750 + MIR SINE MIR 124 212 -50 39 0 0 0 chr2 214210097 214210136 -39046447 + AT_rich Low_complexity Low_complexity 1 39 0 336 24 0 0 chr2 214210471 214210512 -39046071 + (TG)n Simple_repeat Simple_repeat 1 41 0 391 286 57 36 chr2 214211547 214211739 -39044844 - L1ME LINE L1 -393 5728 5533 186 261 134 67 chr2 214212944 214213063 -39043520 + MIR3 SINE MIR 62 188 -20 289 330 121 33 chr2 214213387 214213447 -39043136 - MIR SINE MIR -2 260 207 1835 170 24 3 chr2 214213447 214213783 -39042800 - MER2 DNA MER2_type 0 344 2 289 330 121 33 chr2 214213783 214213937 -39042646 - MIR SINE MIR -55 207 27 808 272 101 60 chr2 214213955 214213994 -39042589 + LTR33 LTR ERVL 4 40 -481 1771 180 0 7 chr2 214213994 214214289 -39042294 + AluJb SINE Alu 2 294 -18 808 272 101 60 chr2 214214289 214214745 -39041838 + LTR33 LTR ERVL 40 519 -2 204 319 43 32 chr2 214214793 214214887 -39041696 - L2 LINE L2 -7 3306 3212 277 121 52 46 chr2 214214926 214215100 -39041483 + (TA)n Simple_repeat Simple_repeat 1 175 0 240 186 34 0 chr2 214215226 214215285 -39041298 + (TA)n Simple_repeat Simple_repeat 1 61 0 1447 139 186 58 chr2 214216686 214216853 -39039730 + MSTA LTR MaLR 1 145 -283 2387 75 0 3 chr2 214216853 214217158 -39039425 + AluY SINE Alu 1 304 -7 1447 139 186 58 chr2 214217158 214217334 -39039249 + MSTA LTR MaLR 145 388 -40 1443 87 33 83 chr2 214217522 214217763 -39038820 - MER30 DNA MER1_type 0 230 2 202 200 0 0 chr2 214218365 214218410 -39038173 + (TG)n Simple_repeat Simple_repeat 2 46 0 33 66 0 0 chr2 214218613 214218674 -39037909 + AT_rich Low_complexity Low_complexity 1 61 0 1368 251 88 70 chr2 214220196 214220793 -39035790 - L1ME3A LINE L1 -89 6081 5465 1580 163 74 29 chr2 214220793 214221143 -39035440 - MER47A DNA MER2_type 0 366 1 1368 251 88 70 chr2 214221143 214221355 -39035228 - L1ME3A LINE L1 -705 5465 5258 25 75 0 0 chr2 214221962 214222015 -39034568 + AT_rich Low_complexity Low_complexity 1 53 0 304 209 70 0 chr2 214222285 214222371 -39034212 - L1ME3 LINE L1 -7 6155 6064 553 211 38 12 chr2 214222394 214222560 -39034023 - L1P1 LINE L1 -398 5757 5594 573 59 71 18 chr2 214222577 214222747 -39033836 + (TA)n Simple_repeat Simple_repeat 2 180 0 26 50 0 0 chr2 214222756 214222796 -39033787 + AT_rich Low_complexity Low_complexity 1 40 0 438 80 62 28 chr2 214222796 214223094 -39033489 + (TA)n Simple_repeat Simple_repeat 1 308 0 500 212 43 57 chr2 214223094 214223363 -39033220 - L1ME3 LINE L1 -570 5594 5244 5639 111 20 19 chr2 214223548 214224725 -39031858 + L1PA13 LINE L1 4768 5942 -221 1776 179 125 13 chr2 214224725 214225110 -39031473 - MSTA LTR MaLR 0 428 1 9199 130 33 40 chr2 214225110 214226699 -39029884 - MSTA-int LTR MaLR 0 1580 3 1875 151 133 21 chr2 214226701 214227086 -39029497 - MSTA LTR MaLR 0 428 1 5639 111 20 19 chr2 214227086 214227313 -39029270 + L1PA13 LINE L1 5942 6163 0 2304 97 17 0 chr2 214227530 214227830 -39028753 + AluSx SINE Alu 1 305 -7 1606 256 71 58 chr2 214229771 214230291 -39026292 - MLT1H LTR MaLR -18 531 5 261 0 0 0 chr2 214230383 214230412 -39026171 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1519 190 66 4 chr2 214231263 214231537 -39025046 + AluJb SINE Alu 1 291 -21 183 297 27 40 chr2 214231977 214232051 -39024532 - L2 LINE L2 -14 3258 3186 243 290 29 87 chr2 214233556 214233694 -39022889 - Charlie8 DNA MER1_type -2198 219 90 185 265 0 20 chr2 214234433 214234482 -39022101 - L2 LINE L2 -18 3295 3248 6308 188 64 10 chr2 214235569 214236949 -39019634 - Charlie1a DNA MER1_type -1 1454 1 273 287 49 63 chr2 214237610 214237753 -39018830 + MIR SINE MIR 47 187 -75 21 36 0 0 chr2 214237803 214237831 -39018752 + AT_rich Low_complexity Low_complexity 1 28 0 219 114 0 0 chr2 214239120 214239155 -39017428 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 349 358 33 0 chr2 214239576 214239696 -39016887 + MIR3 SINE MIR 31 154 -54 701 308 153 24 chr2 214240484 214241019 -39015564 - L2 LINE L2 -641 2673 2070 350 296 56 0 chr2 214241217 214241325 -39015258 + L2 LINE L2 3148 3261 -11 396 324 29 49 chr2 214241355 214241661 -39014922 + L2 LINE L2 2135 2434 -880 1357 221 102 54 chr2 214242725 214243205 -39013378 + MLT1D LTR MaLR 1 503 -2 368 349 41 24 chr2 214243706 214243875 -39012708 + HAL1b LINE L1 737 908 -440 313 300 67 0 chr2 214244011 214244131 -39012452 + HAL1 LINE L1 2270 2397 -110 503 233 11 3 chr2 214244204 214244378 -39012205 - MER58B DNA MER1_type -1 340 4 969 248 103 97 chr2 214244378 214245181 -39011402 - HAL1 LINE L1 -32 2475 1668 366 301 146 73 chr2 214245247 214245603 -39010980 - HAL1 LINE L1 -1965 542 161 24 0 0 0 chr2 214245756 214245780 -39010803 + AT_rich Low_complexity Low_complexity 1 24 0 336 190 89 0 chr2 214246448 214246527 -39010056 - MER5C DNA MER1_type -6 318 233 350 287 37 9 chr2 214246553 214246661 -39009922 - MER5C DNA MER1_type -204 120 10 196 412 12 0 chr2 214246879 214246964 -39009619 - L2 LINE L2 -20 3252 3167 236 176 0 39 chr2 214246994 214247045 -39009538 + (TATATG)n Simple_repeat Simple_repeat 5 53 0 540 234 42 75 chr2 214247626 214247840 -39008743 + L2 LINE L2 3002 3208 -105 288 254 22 65 chr2 214248127 214248265 -39008318 - L2 LINE L2 -58 3255 3124 21 36 0 0 chr2 214249338 214249366 -39007217 + AT_rich Low_complexity Low_complexity 1 28 0 433 328 144 30 chr2 214250537 214250688 -39005895 - L3 LINE CR1 -15 1562 1430 2498 76 0 0 chr2 214250688 214250989 -39005594 - AluSg SINE Alu -9 301 1 433 328 144 30 chr2 214250989 214251108 -39005475 - L3 LINE CR1 -147 1430 1261 641 288 77 45 chr2 214251475 214251788 -39004795 - L3 LINE CR1 -353 1224 902 1985 195 110 78 chr2 214252110 214252909 -39003674 - LTR1B LTR ERV1 0 826 2 1599 228 49 82 chr2 214252910 214253507 -39003076 - L1ME3A LINE L1 -100 6070 5494 326 217 185 16 chr2 214253520 214253704 -39002879 - L1ME3A LINE L1 -1573 4573 4359 1888 267 131 47 chr2 214253787 214255280 -39001303 - L1ME3A LINE L1 -2217 3929 2312 182 297 47 0 chr2 214255280 214255344 -39001239 - MIR3 SINE MIR -7 201 135 495 262 111 29 chr2 214256315 214256487 -39000096 + MIR SINE MIR 58 243 -19 254 343 22 36 chr2 214261435 214261572 -38995011 + L2 LINE L2 3179 3313 0 1961 133 0 19 chr2 214262324 214262633 -38993950 + AluSg SINE Alu 6 308 -2 416 298 41 42 chr2 214263617 214263859 -38992724 - MIR SINE MIR 0 262 18 2161 190 70 13 chr2 214264316 214264790 -38991793 + MLT1D LTR MaLR 5 505 0 492 296 86 16 chr2 214265517 214265703 -38990880 + MIR SINE MIR 62 260 -2 23 0 0 0 chr2 214266354 214266377 -38990206 + AT_rich Low_complexity Low_complexity 1 23 0 212 365 0 29 chr2 214266838 214266942 -38989641 - MIR3 SINE MIR 0 208 108 22 35 0 0 chr2 214267172 214267201 -38989382 + AT_rich Low_complexity Low_complexity 1 29 0 491 290 190 5 chr2 214267380 214267580 -38989003 + MIR SINE MIR 9 245 -17 457 232 87 22 chr2 214267870 214268008 -38988575 + L2 LINE L2 3166 3312 -1 275 356 9 17 chr2 214268013 214268128 -38988455 + MIR SINE MIR 80 193 -69 180 152 0 0 chr2 214268803 214268836 -38987747 + (TATG)n Simple_repeat Simple_repeat 1 33 0 464 294 166 31 chr2 214271321 214271647 -38984936 + L3 LINE CR1 1192 1561 -16 299 226 57 57 chr2 214271860 214271966 -38984617 + MLT1L LTR MaLR 173 278 -337 230 262 77 49 chr2 214274915 214275098 -38981485 - L1ME4a LINE L1 -16 6105 5918 5227 139 24 3 chr2 214275760 214276590 -38979993 - L1PA16 LINE L1 0 6166 5316 2052 137 7 3 chr2 214276590 214276897 -38979686 - AluSx SINE Alu -4 308 1 5227 139 24 3 chr2 214276897 214276938 -38979645 - L1PA16 LINE L1 -850 5316 5277 713 299 21 21 chr2 214277026 214277267 -38979316 - MIR SINE MIR -14 248 8 681 137 48 0 chr2 214278101 214278225 -38978358 - L1MB3 LINE L1 -8 6175 6046 579 309 74 51 chr2 214279221 214279532 -38977051 - L2 LINE L2 -22 3291 2974 191 333 0 0 chr2 214279963 214280014 -38976569 + L2 LINE L2 3222 3272 0 2055 95 0 0 chr2 214280145 214280418 -38976165 + AluY SINE Alu 39 311 0 715 263 139 11 chr2 214280724 214281005 -38975578 - MER46C DNA MER2_type -21 317 1 24 0 0 0 chr2 214281812 214281836 -38974747 + AT_rich Low_complexity Low_complexity 1 24 0 684 126 8 17 chr2 214282188 214282307 -38974276 - FLAM_C SINE Alu -2 141 24 21 0 0 0 chr2 214285054 214285075 -38971508 + AT_rich Low_complexity Low_complexity 1 21 0 319 182 52 0 chr2 214285473 214285550 -38971033 + L1MD1 LINE L1 6151 6231 -11 2121 130 0 7 chr2 214285562 214285869 -38970714 - AluSx SINE Alu -7 305 1 509 300 23 0 chr2 214285870 214286000 -38970583 - MIR SINE MIR -106 156 24 2177 117 0 10 chr2 214286352 214286659 -38969924 + AluSg SINE Alu 1 304 -6 290 280 40 57 chr2 214286966 214287141 -38969442 - L1ME4a LINE L1 -263 5907 5736 394 174 93 0 chr2 214287322 214287408 -38969175 + L1MB3 LINE L1 6089 6182 -1 1975 167 40 26 chr2 214287415 214287835 -38968748 - L1MB3 LINE L1 -8 6175 5750 1395 256 87 13 chr2 214287836 214288305 -38968278 - L1MC4 LINE L1 -1160 6882 6379 262 213 107 27 chr2 214288477 214288552 -38968031 + MLT1K LTR MaLR 501 581 -7 462 233 253 14 chr2 214290280 214290426 -38966157 + MER5A DNA MER1_type 9 189 0 436 110 0 121 chr2 214290581 214290645 -38965938 - MADE1 DNA Mariner 0 80 29 2459 60 0 0 chr2 214290645 214290943 -38965640 - AluY SINE Alu -13 298 1 436 110 0 121 chr2 214290943 214290969 -38965614 - MADE1 DNA Mariner -51 29 1 21 0 0 0 chr2 214291288 214291309 -38965274 + AT_rich Low_complexity Low_complexity 1 21 0 1892 153 65 6 chr2 214292287 214292641 -38963942 - THE1C LTR MaLR 0 375 1 334 233 39 19 chr2 214294770 214294873 -38961710 - MLT1J LTR MaLR -18 493 389 201 147 59 0 chr2 214295041 214295075 -38961508 + MER5A DNA MER1_type 77 112 -77 441 258 25 31 chr2 214295075 214295234 -38961349 - MLT1J LTR MaLR -350 161 4 21 0 0 0 chr2 214295674 214295695 -38960888 + AT_rich Low_complexity Low_complexity 1 21 0 218 136 23 23 chr2 214301214 214301258 -38955325 + (TTTG)n Simple_repeat Simple_repeat 4 47 0 3851 167 14 17 chr2 214301515 214302239 -38954344 - MER72 LTR ERV1 0 722 1 230 287 123 25 chr2 214302694 214302816 -38953767 - MIR SINE MIR -59 149 16 23 54 0 0 chr2 214303841 214303878 -38952705 + AT_rich Low_complexity Low_complexity 1 37 0 426 20 0 0 chr2 214304006 214304057 -38952526 + (CA)n Simple_repeat Simple_repeat 2 52 0 2058 119 20 13 chr2 214304087 214304390 -38952193 - AluSq SINE Alu -8 305 1 204 40 0 0 chr2 214304595 214304620 -38951963 + (A)n Simple_repeat Simple_repeat 1 25 0 1006 50 0 0 chr2 214306529 214306648 -38949935 - AluY SINE Alu -15 296 178 543 259 46 10 chr2 214307044 214307241 -38949342 + L1MC4 LINE L1 6854 7057 -985 3113 240 82 43 chr2 214307264 214308928 -38947655 + L1ME1 LINE L1 4374 6159 -7 379 292 79 6 chr2 214308993 214309171 -38947412 + L1MC4 LINE L1 7078 7268 -774 452 282 107 57 chr2 214309391 214309973 -38946610 + L1MC4 LINE L1 7311 8026 -16 5046 170 29 14 chr2 214310303 214310976 -38945607 - L1PB3 LINE L1 -2 6152 5491 1856 98 30 82 chr2 214310976 214311281 -38945302 - AluSp SINE Alu -20 293 5 5046 170 29 14 chr2 214311281 214312432 -38944151 - L1PB3 LINE L1 -663 5491 4310 1214 249 172 7 chr2 214312487 214312929 -38943654 - MLT1E2 LTR MaLR -1 625 111 412 228 158 16 chr2 214312928 214313055 -38943528 - MLT1E2 LTR MaLR -504 150 6 * 23 0 0 0 chr2 214313469 214313492 -38943091 + AT_rich Low_complexity Low_complexity 1 23 0 1501 154 47 36 chr2 214313494 214313773 -38942810 - AluJo SINE Alu -30 282 1 1749 148 6 52 chr2 214314018 214314343 -38942240 - AluSx SINE Alu -2 310 1 1829 233 10 20 chr2 214314428 214314827 -38941756 - MLT1G LTR MaLR 0 590 196 861 208 39 0 chr2 214315956 214316134 -38940449 + MER5A DNA MER1_type 5 189 0 201 255 0 20 chr2 214317155 214317206 -38939377 + L2 LINE L2 3222 3271 -1 195 303 58 58 chr2 214318472 214318660 -38937923 - L2 LINE L2 -1600 1714 1527 196 329 175 33 chr2 214318944 214319275 -38937308 - L2 LINE L2 -2207 1107 730 283 343 75 71 chr2 214319319 214319429 -38937154 - MIR SINE MIR 0 262 154 2109 139 0 0 chr2 214319429 214319724 -38936859 - AluSx SINE Alu -17 295 1 283 343 75 71 chr2 214319724 214319867 -38936716 - MIR SINE MIR -108 154 8 7446 32 7 0 chr2 214320004 214321321 -38935262 - L1PA5 LINE L1 -2 6152 4832 3680 55 11 2 chr2 214321321 214321797 -38934786 + L1PA5 LINE L1 4359 4838 -1308 21 0 0 0 chr2 214321825 214321846 -38934737 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr2 214322070 214322099 -38934484 + AT_rich Low_complexity Low_complexity 1 29 0 856 193 27 16 chr2 214322594 214322781 -38933802 - MER5A DNA MER1_type 0 189 1 1645 173 0 10 chr2 214324322 214324611 -38931972 + AluSx SINE Alu 1 286 -26 540 45 0 0 chr2 214324611 214324678 -38931905 + (CATA)n Simple_repeat Simple_repeat 2 68 0 361 186 24 195 chr2 214325273 214325483 -38931100 - MER69A DNA AcHobo -2 175 2 365 307 182 10 chr2 214326202 214326394 -38930189 + MIR SINE MIR 18 242 -20 598 294 6 12 chr2 214327581 214327741 -38928842 + MIR3 SINE MIR 43 201 -7 709 189 8 0 chr2 214327792 214327914 -38928669 + FLAM_C SINE Alu 1 123 -20 186 71 0 0 chr2 214327914 214327942 -38928641 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 899 297 27 8 chr2 214328362 214328618 -38927965 + MIR SINE MIR 2 262 0 449 344 52 5 chr2 214328735 214328947 -38927636 - MLT1J LTR MaLR -289 222 1 363 306 99 8 chr2 214329711 214329832 -38926751 - L2 LINE L2 0 3313 3182 5078 132 24 4 chr2 214330799 214331625 -38924958 - L1PA16 LINE L1 -20 6146 5304 24 32 0 0 chr2 214331712 214331743 -38924840 + AT_rich Low_complexity Low_complexity 1 31 0 382 196 100 26 chr2 214331977 214332089 -38924494 - MLT1H LTR MaLR 0 555 431 250 264 88 33 chr2 214332168 214332259 -38924324 - MLT1H LTR MaLR -283 312 217 426 239 102 36 chr2 214332531 214332698 -38923885 + MER5B DNA MER1_type 1 178 0 227 254 16 0 chr2 214333566 214333629 -38922954 - L1ME LINE L1 -315 5806 5743 474 248 40 20 chr2 214333675 214333824 -38922759 - L1ME LINE L1 -472 5649 5498 543 298 43 24 chr2 214334962 214335170 -38921413 - MIR SINE MIR -2 260 49 21 0 0 0 chr2 214335855 214335876 -38920707 + AT_rich Low_complexity Low_complexity 1 21 0 1949 131 25 38 chr2 214336131 214336445 -38920138 - AluSg SINE Alu 0 310 1 2511 74 3 0 chr2 214336771 214337081 -38919502 - AluSp SINE Alu -2 311 1 3459 123 22 41 chr2 214338012 214338567 -38918016 - MER61E LTR ERV1 -25 544 1 258 32 0 0 chr2 214338734 214338765 -38917818 + (TG)n Simple_repeat Simple_repeat 2 32 0 808 190 56 6 chr2 214339208 214339387 -38917196 + MER5A DNA MER1_type 1 188 -1 246 359 136 0 chr2 214339441 214339544 -38917039 + MIR SINE MIR 36 152 -56 21 36 0 0 chr2 214340018 214340046 -38916537 + AT_rich Low_complexity Low_complexity 1 28 0 192 77 0 0 chr2 214340976 214341002 -38915581 + (T)n Simple_repeat Simple_repeat 1 26 0 23359 20 0 0 chr2 214341020 214344562 -38912021 - L1HS LINE L1 0 6155 2614 1320 96 29 10 chr2 214345501 214345709 -38910874 + L1PA16 LINE L1 5951 6162 -4 21 0 0 0 chr2 214346914 214346935 -38909648 + AT_rich Low_complexity Low_complexity 1 21 0 647 313 116 38 chr2 214347704 214348401 -38908182 + L2 LINE L2 2554 3312 -1 315 317 134 11 chr2 214349405 214349591 -38906992 - MIR SINE MIR -33 229 21 1629 181 7 4 chr2 214351510 214351786 -38904797 + AluJb SINE Alu 3 279 -33 1639 137 78 75 chr2 214351786 214352159 -38904424 + THE1C LTR MaLR 2 375 0 760 363 54 5 chr2 214352630 214353021 -38903562 + L2 LINE L2 2446 2855 -459 269 304 80 45 chr2 214353273 214353385 -38903198 + L2 LINE L2 3198 3313 0 210 277 72 36 chr2 214353711 214353794 -38902789 - MIR SINE MIR -155 107 22 221 222 50 61 chr2 214356398 214356578 -38900005 + (TATG)n Simple_repeat Simple_repeat 3 180 0 * 358 224 59 12 chr2 214356448 214356618 -38899965 + (TA)n Simple_repeat Simple_repeat 2 179 0 697 244 85 66 chr2 214357289 214357560 -38899023 - MLT1B LTR MaLR -114 276 1 500 115 13 0 chr2 214357589 214357667 -38898916 - MADE1 DNA Mariner -1 79 1 628 272 30 1 chr2 214357681 214357836 -38898747 - MIR SINE MIR -46 162 2 211 288 0 30 chr2 214357987 214358156 -38898427 + MIR SINE MIR 12 239 -23 235 309 0 60 chr2 214359668 214359752 -38896831 + L2 LINE L2 3229 3307 -6 2129 119 0 7 chr2 214359853 214360155 -38896428 + AluSg SINE Alu 1 300 -10 221 415 15 7 chr2 214362617 214362752 -38893831 + MIR3 SINE MIR 19 154 -54 1500 169 49 26 chr2 214363100 214363367 -38893216 - AluJo SINE Alu -34 278 6 2508 79 0 0 chr2 214363886 214364191 -38892392 - AluY SINE Alu -6 305 1 2123 138 0 0 chr2 214364844 214365155 -38891428 + AluSx SINE Alu 1 311 -1 189 0 0 0 chr2 214367385 214367406 -38889177 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2120 125 0 3 chr2 214367524 214367828 -38888755 - AluSg SINE Alu -7 303 1 1171 229 128 21 chr2 214368439 214368828 -38887755 + MER63B DNA MER1_type 6 436 0 2174 112 0 0 chr2 214370930 214371217 -38885366 + AluSx SINE Alu 17 303 -9 24 0 0 0 chr2 214371736 214371760 -38884823 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr2 214371935 214371957 -38884626 + AT_rich Low_complexity Low_complexity 1 22 0 15106 162 32 7 chr2 214372004 214374633 -38881950 + L1MA3 LINE L1 22 2718 -4847 10720 88 9 3 chr2 214374631 214376139 -38880444 - L1PA7 LINE L1 -891 5255 3740 * 6797 59 7 0 chr2 214376139 214377027 -38879556 + L1PA7 LINE L1 5265 6158 0 7885 206 112 19 chr2 214377027 214377966 -38878617 + L1MA3 LINE L1 2710 3560 -4005 1474 161 24 52 chr2 214377966 214378257 -38878326 + AluJb SINE Alu 7 289 -23 7885 206 112 19 chr2 214378257 214380922 -38875661 + L1MA3 LINE L1 3560 6822 -743 2428 129 6 3 chr2 214380923 214381272 -38875311 - THE1B LTR MaLR 0 364 15 5138 141 50 1 chr2 214381275 214382139 -38874444 + L1MA3 LINE L1 6819 7724 0 10399 165 27 33 chr2 214382354 214385265 -38871318 - L1PA13 LINE L1 -1 6162 3210 413 280 93 53 chr2 214385961 214386282 -38870301 - L1ME2 LINE L1 -68 6165 5832 3879 167 35 4 chr2 214386284 214386974 -38869609 - MER50 LTR ERV1 -23 711 1 5425 228 82 65 chr2 214386974 214389930 -38866653 - L1ME2 LINE L1 -404 5831 2827 4739 268 80 19 chr2 214390076 214392028 -38864555 - L1ME2 LINE L1 -4311 2085 16 727 229 6 23 chr2 214392967 214393142 -38863441 + L1MC3 LINE L1 6468 6639 -1146 7667 160 30 22 chr2 214393142 214394093 -38862490 + Tigger1 DNA MER2_type 1 943 -1475 2175 123 0 3 chr2 214394093 214394394 -38862189 - AluSp SINE Alu -9 304 5 7667 160 30 22 chr2 214394394 214394554 -38862029 + Tigger1 DNA MER2_type 943 1100 -1318 2095 138 0 6 chr2 214394554 214394865 -38861718 + AluSx SINE Alu 1 309 -3 7667 160 30 22 chr2 214394865 214395143 -38861440 + Tigger1 DNA MER2_type 1100 1402 -1016 1872 107 46 122 chr2 214395143 214395311 -38861272 + THE1B LTR MaLR 1 180 -184 3392 36 17 0 chr2 214395311 214395725 -38860858 + L1PA3 LINE L1 5732 6152 -3 1872 107 46 122 chr2 214395725 214395950 -38860633 + THE1B LTR MaLR 180 364 0 3626 97 16 0 chr2 214395950 214396466 -38860117 + Tigger1 DNA MER2_type 1398 1921 -497 33 0 0 0 chr2 214397394 214397427 -38859156 + AT_rich Low_complexity Low_complexity 1 33 0 2069 142 0 0 chr2 214397679 214397975 -38858608 + AluSx SINE Alu 1 296 -16 629 293 215 35 chr2 214398147 214398580 -38858003 + LTR33 LTR ERVL 3 513 -8 888 209 20 26 chr2 214398847 214399148 -38857435 - MER89 LTR ERV1 0 559 202 408 241 0 0 chr2 214399126 214399209 -38857374 - MER89 LTR ERV1 -470 89 7 * 23 0 0 0 chr2 214400660 214400683 -38855900 + AT_rich Low_complexity Low_complexity 1 23 0 1959 143 0 14 chr2 214400759 214401053 -38855530 + AluJo SINE Alu 1 290 -22 237 226 0 0 chr2 214401861 214401914 -38854669 + (TGAA)n Simple_repeat Simple_repeat 1 53 0 263 299 100 58 chr2 214402191 214402432 -38854151 + L2 LINE L2 1943 2193 -1121 * 271 287 11 23 chr2 214402423 214402510 -38854073 + MER5B DNA MER1_type 89 174 -4 209 392 41 0 chr2 214402817 214402914 -38853669 + L2 LINE L2 2721 2821 -493 306 284 268 11 chr2 214403250 214403433 -38853150 - MIR SINE MIR -5 257 28 1936 125 135 46 chr2 214403563 214403739 -38852844 + MSTA LTR MaLR 1 160 -268 2804 19 0 0 chr2 214403739 214404046 -38852537 + AluY SINE Alu 1 307 -4 1936 125 135 46 chr2 214404046 214404262 -38852321 + MSTA LTR MaLR 160 428 0 22 35 0 0 chr2 214405056 214405085 -38851498 + AT_rich Low_complexity Low_complexity 1 29 0 2247 84 0 13 chr2 214405979 214406277 -38850306 + AluY SINE Alu 18 311 0 263 331 88 57 chr2 214407470 214407491 -38849092 + L2 LINE L2 2725 2744 -569 2379 110 31 8 chr2 214407491 214407846 -38848737 + THE1B LTR MaLR 2 364 0 263 331 88 57 chr2 214407846 214408324 -38848259 + L2 LINE L2 2744 3264 -49 186 243 216 14 chr2 214408762 214408836 -38847747 + L2 LINE L2 2644 2732 -582 400 301 113 27 chr2 214408936 214409122 -38847461 + MIR SINE MIR 14 215 -47 193 346 74 25 chr2 214409341 214409422 -38847161 - L2 LINE L2 -190 3082 2998 249 356 0 10 chr2 214409460 214409564 -38847019 + C-rich Low_complexity Low_complexity 1 103 0 964 176 195 44 chr2 214409653 214409889 -38846694 + MER47A DNA MER2_type 1 299 -2024 222 37 0 0 chr2 214409889 214409916 -38846667 + (CTAGG)n Simple_repeat Simple_repeat 2 28 0 964 176 195 44 chr2 214409916 214409997 -38846586 + MER47A DNA MER2_type 299 366 0 1980 139 7 0 chr2 214410402 214410690 -38845893 + AluSx SINE Alu 1 290 -22 232 191 96 0 chr2 214410830 214410924 -38845659 + L1ME4a LINE L1 6007 6109 -12 1166 124 6 0 chr2 214411444 214411605 -38844978 - AluSg/x SINE Alu -14 296 135 477 344 91 0 chr2 214411705 214411935 -38844648 - L3 LINE CR1 -127 1450 1200 233 237 144 62 chr2 214411979 214412076 -38844507 - L2 LINE L2 -46 3226 3122 1946 125 29 0 chr2 214412217 214412371 -38844212 - AluSx SINE Alu -25 287 120 369 0 0 0 chr2 214412371 214412412 -38844171 + (TG)n Simple_repeat Simple_repeat 2 42 0 1946 125 29 0 chr2 214412412 214412536 -38844047 - AluSx SINE Alu -192 120 1 1004 186 40 4 chr2 214412620 214412872 -38843711 + L1MA4 LINE L1 6030 6290 -10 1555 190 51 3 chr2 214414716 214415027 -38841556 + MER44D DNA MER2_type 14 609 0 875 226 0 0 chr2 214416991 214417172 -38839411 - MER5A DNA MER1_type -2 187 7 195 42 0 0 chr2 214417406 214417430 -38839153 + (TCTCC)n Simple_repeat Simple_repeat 5 28 0 1540 167 52 0 chr2 214417443 214417694 -38838889 - AluSg SINE Alu -44 266 3 27 29 0 0 chr2 214418429 214418463 -38838120 + AT_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr2 214419468 214419490 -38837093 + AT_rich Low_complexity Low_complexity 1 22 0 236 297 81 47 chr2 214420044 214420451 -38836132 + L1ME LINE L1 5257 5677 -444 300 266 84 35 chr2 214420503 214420646 -38835937 + MLT1A1 LTR MaLR 29 178 -187 314 283 33 0 chr2 214421277 214421369 -38835214 + MER112 DNA MER1_type 1 95 -165 2844 198 50 0 chr2 214421458 214421993 -38834590 + Tigger7 DNA MER2_type 1 562 -171 1925 102 53 37 chr2 214421990 214422312 -38834271 + Tigger7 DNA MER2_type 2161 2487 0 * 233 284 49 12 chr2 214422363 214422444 -38834139 - HAL1 LINE L1 -913 1594 1511 1201 135 5 58 chr2 214422459 214422666 -38833917 + AluJo SINE Alu 86 281 -31 332 130 14 0 chr2 214422666 214422735 -38833848 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 182 255 59 0 chr2 214424117 214424168 -38832415 - L3b LINE CR1 -140 1443 1390 249 83 0 0 chr2 214424497 214424533 -38832050 + (TA)n Simple_repeat Simple_repeat 2 37 0 1857 98 0 0 chr2 214425779 214426014 -38830569 - AluSq SINE Alu -78 235 1 226 229 0 0 chr2 214426316 214426364 -38830219 + (TATATG)n Simple_repeat Simple_repeat 2 49 0 294 312 0 0 chr2 214427314 214427391 -38829192 - L2 LINE L2 -193 3079 3003 590 327 58 72 chr2 214427699 214428201 -38828382 - L2 LINE L2 -2 3311 2817 180 377 39 0 chr2 214428521 214428598 -38827985 - L2 LINE L2 -3224 90 11 1919 151 3 10 chr2 214428800 214429099 -38827484 - LTR9 LTR ERV1 0 612 316 416 250 0 0 chr2 214429154 214429234 -38827349 - FRAM/FAM SINE Alu -87 79 1 2231 104 3 0 chr2 214429285 214429574 -38827009 + AluSc SINE Alu 2 291 -18 189 0 0 0 chr2 214429574 214429595 -38826988 + (TA)n Simple_repeat Simple_repeat 1 21 0 4679 157 37 30 chr2 214429595 214431064 -38825519 - L1MA7 LINE L1 -167 6124 4652 982 260 44 56 chr2 214431406 214431876 -38824707 - MER39 LTR ERV1 0 707 67 1444 188 86 48 chr2 214432291 214432777 -38823806 + L1MA9 LINE L1 5694 6235 -77 240 145 0 58 chr2 214432782 214432851 -38823732 + (TATAA)n Simple_repeat Simple_repeat 5 69 0 474 18 0 0 chr2 214435181 214435236 -38821347 + (TC)n Simple_repeat Simple_repeat 1 55 0 258 32 0 0 chr2 214435946 214435977 -38820606 + (A)n Simple_repeat Simple_repeat 1 31 0 263 238 40 103 chr2 214436243 214436369 -38820214 + MIR SINE MIR 33 150 -58 2716 134 9 7 chr2 214436752 214437176 -38819407 - MER61B LTR ERV1 0 425 1 586 348 80 30 chr2 214438155 214438823 -38817760 + L2 LINE L2 2587 3288 -25 230 284 90 0 chr2 214438852 214438919 -38817664 - MER20 DNA MER1_type -97 122 50 5953 81 20 28 chr2 214438945 214439813 -38816770 + L1PB1 LINE L1 5289 6149 -2 224 273 78 0 chr2 214440345 214440422 -38816161 + MIR SINE MIR 169 251 -11 240 214 31 82 chr2 214440518 214440616 -38815967 - L2 LINE L2 0 3313 3221 302 253 103 0 chr2 214440676 214440763 -38815820 - L1MC4 LINE L1 -1337 6705 6610 2002 120 0 14 chr2 214440833 214441124 -38815459 + AluSq SINE Alu 26 312 -1 21 0 0 0 chr2 214441816 214441837 -38814746 + AT_rich Low_complexity Low_complexity 1 21 0 348 342 27 27 chr2 214442261 214442445 -38814138 - MIR SINE MIR -15 247 64 244 293 9 94 chr2 214442506 214442612 -38813971 - MIR3 SINE MIR -9 199 103 242 236 236 81 chr2 214443246 214443407 -38813176 - MER5A DNA MER1_type 0 189 4 21 0 0 0 chr2 214446131 214446152 -38810431 + AT_rich Low_complexity Low_complexity 1 21 0 301 237 31 0 chr2 214446255 214446352 -38810231 + (TA)n Simple_repeat Simple_repeat 1 100 0 263 386 98 20 chr2 214447509 214447763 -38808820 - L2 LINE L2 -20 3293 3020 2022 143 0 0 chr2 214447882 214448169 -38808414 + AluSq SINE Alu 1 287 -26 200 0 100 0 chr2 214448185 214448215 -38808368 + A-rich Low_complexity Low_complexity 4 36 0 1457 210 58 30 chr2 214448601 214449001 -38807582 - L1ME2 LINE L1 0 6164 5754 866 198 29 0 chr2 214449109 214449281 -38807302 - L1MB7 LINE L1 -10 6174 5998 409 232 50 0 chr2 214449504 214449603 -38806980 - MER5A DNA MER1_type -77 112 9 499 180 45 0 chr2 214450909 214450998 -38805585 - MER8 DNA MER2_type 0 239 147 3072 37 0 16 chr2 214451051 214451433 -38805150 + L1PA5 LINE L1 5779 6154 0 622 245 45 7 chr2 214451435 214451590 -38804993 - MER8 DNA MER2_type -78 161 1 25 0 0 0 chr2 214452723 214452748 -38803835 + AT_rich Low_complexity Low_complexity 1 25 0 228 189 81 90 chr2 214453420 214453531 -38803052 + MIR3 SINE MIR 13 122 -86 2275 96 7 3 chr2 214454401 214454704 -38801879 + AluSc SINE Alu 1 304 -5 221 301 29 66 chr2 214456700 214456836 -38799747 - MER5A DNA MER1_type -3 186 56 2198 109 10 0 chr2 214457390 214457406 -38799177 - AluSg SINE Alu -3 307 293 432 56 42 0 chr2 214457406 214457478 -38799105 + (TA)n Simple_repeat Simple_repeat 2 76 0 2198 109 10 0 chr2 214457478 214457765 -38798818 - AluSg SINE Alu -17 293 1 2136 105 3 3 chr2 214457773 214458058 -38798525 - AluSg1 SINE Alu -24 285 1 6144 94 24 0 chr2 214458470 214459457 -38797126 - L1PA11 LINE L1 0 6174 5193 1803 166 7 3 chr2 214462482 214462772 -38793811 + AluJb SINE Alu 12 302 -10 462 228 195 0 chr2 214463431 214463580 -38793003 - MER45A DNA AcHobo 0 178 1 221 195 0 0 chr2 214464279 214464320 -38792263 + L2 LINE L2 3273 3313 0 345 310 92 32 chr2 214466158 214466425 -38790158 - L2 LINE L2 -307 3006 2721 646 211 19 19 chr2 214466453 214466609 -38789974 + MER33 DNA MER1_type 1 156 -168 1800 266 160 13 chr2 214466613 214467439 -38789144 - L2 LINE L2 -612 2702 1703 1203 193 76 7 chr2 214467531 214467832 -38788751 - MER33 DNA MER1_type -2 322 1 184 266 213 11 chr2 214468489 214468583 -38788000 + MIR3 SINE MIR 93 205 -3 21 0 0 0 chr2 214469519 214469540 -38787043 + AT_rich Low_complexity Low_complexity 1 21 0 443 324 20 44 chr2 214470404 214470654 -38785929 + MIR SINE MIR 17 260 -2 919 197 32 5 chr2 214471511 214471699 -38784884 - L1MD1 LINE L1 -8 6234 6042 578 191 57 0 chr2 214472008 214472149 -38784434 + L1MB3 LINE L1 6035 6183 0 1397 116 123 8 chr2 214472207 214472475 -38784108 - L1MA3 LINE L1 0 6305 6007 17986 136 34 35 chr2 214472476 214476117 -38780466 - L1 LINE L1 -3333 4232 606 2634 39 0 0 chr2 214476409 214476717 -38779866 + AluY SINE Alu 1 308 -3 269 122 0 0 chr2 214478533 214478582 -38778001 + L1MA3 LINE L1 6257 6305 0 25 0 0 0 chr2 214478584 214478609 -38777974 + AT_rich Low_complexity Low_complexity 1 25 0 1977 110 0 0 chr2 214481005 214481277 -38775306 - AluY SINE Alu -15 296 25 1849 166 0 0 chr2 214481716 214482023 -38774560 - AluSx SINE Alu 0 307 1 298 252 87 65 chr2 214483170 214483400 -38773183 + L1ME LINE L1 5517 5751 -370 447 317 28 14 chr2 214483527 214483672 -38772911 + MIR SINE MIR 17 163 -99 316 290 56 9 chr2 214483804 214483911 -38772672 - L1ME LINE L1 -289 5832 5721 2264 86 0 13 chr2 214484650 214484963 -38771620 - AluY SINE Alu -2 309 1 649 158 24 0 chr2 214485805 214485932 -38770651 + L1MA9 LINE L1 6183 6312 0 436 274 240 6 chr2 214487286 214487461 -38769122 + MIR SINE MIR 2 217 -45 1879 207 140 6 chr2 214487470 214487983 -38768600 + MER119 DNA MER1_type 2 583 0 1639 198 39 12 chr2 214488047 214488381 -38768202 + MER61A LTR ERV1 1 343 0 28 0 0 0 chr2 214489313 214489341 -38767242 + AT_rich Low_complexity Low_complexity 1 28 0 466 315 50 84 chr2 214490885 214491206 -38765377 - L2 LINE L2 -1 3312 3003 * 490 281 243 20 chr2 214491205 214491649 -38764934 - L2 LINE L2 -483 2831 2289 2799 10 0 0 chr2 214492370 214492674 -38763909 + AluYa5 SINE Alu 1 304 -7 295 252 40 104 chr2 214493020 214493242 -38763341 - L1MC4 LINE L1 -9 8033 7826 1605 213 48 30 chr2 214493277 214493710 -38762873 - L1ME2 LINE L1 -11 6153 5713 189 317 132 77 chr2 214495728 214496715 -38759868 - L2 LINE L2 -576 2738 1698 2535 165 117 47 chr2 214496730 214497677 -38758906 + MER106B DNA MER1_type 1 1059 0 360 189 9 18 chr2 214499000 214499111 -38757472 + (TA)n Simple_repeat Simple_repeat 2 111 0 2012 137 67 17 chr2 214499757 214500114 -38756469 + THE1C LTR MaLR 1 375 0 1975 180 0 32 chr2 214501193 214501570 -38755013 + MLT1A1 LTR MaLR 1 365 0 435 113 0 0 chr2 214501826 214501897 -38754686 + (TAGG)n Simple_repeat Simple_repeat 1 71 0 1665 253 68 55 chr2 214501982 214502508 -38754075 - MLT1H LTR MaLR -16 533 1 27 0 0 0 chr2 214504039 214504066 -38752517 + AT_rich Low_complexity Low_complexity 1 27 0 1203 181 246 4 chr2 214504266 214504543 -38752040 + MER2 DNA MER2_type 1 344 -1 737 310 57 4 chr2 214505186 214505415 -38751168 + MIR SINE MIR 14 254 -8 390 252 36 65 chr2 214508045 214508184 -38748399 - MIR3 SINE MIR -71 137 3 218 284 0 0 chr2 214509118 214509185 -38747398 + T-rich Low_complexity Low_complexity 1 67 0 2385 68 0 32 chr2 214509269 214509579 -38747004 + AluY SINE Alu 1 300 -11 234 194 16 32 chr2 214509585 214509647 -38746936 + (TA)n Simple_repeat Simple_repeat 1 61 0 430 322 44 11 chr2 214510547 214510727 -38745856 - MIR SINE MIR -74 188 3 311 217 12 36 chr2 214511014 214511097 -38745486 - MIR SINE MIR -98 164 84 571 289 127 29 chr2 214512227 214512514 -38744069 + L2 LINE L2 2743 3055 -217 617 284 53 6 chr2 214512633 214512802 -38743781 + MER5B DNA MER1_type 2 178 0 260 306 57 40 chr2 214512802 214512920 -38743663 + L2 LINE L2 3153 3272 0 1494 126 0 0 chr2 214515196 214515411 -38741172 + AluSg/x SINE Alu 82 296 -14 24 0 0 0 chr2 214515864 214515888 -38740695 + AT_rich Low_complexity Low_complexity 1 24 0 884 169 103 0 chr2 214516882 214517066 -38739517 + L1PA13 LINE L1 5961 6163 0 264 226 0 0 chr2 214517167 214517229 -38739354 + (TATG)n Simple_repeat Simple_repeat 2 63 0 24 0 0 0 chr2 214518622 214518646 -38737937 + AT_rich Low_complexity Low_complexity 1 24 0 2223 229 55 22 chr2 214519107 214519691 -38736892 - LTR26 LTR ERV1 0 603 1 204 361 0 0 chr2 214520229 214520301 -38736282 + L2 LINE L2 3201 3272 0 1670 232 20 76 chr2 214520644 214521195 -38735388 - MLT2B1 LTR ERVL 0 520 1 283 44 44 0 chr2 214521552 214521597 -38734986 + (TCCCC)n Simple_repeat Simple_repeat 2 48 0 1965 165 0 13 chr2 214523327 214523643 -38732940 - AluJb SINE Alu 0 312 1 23 0 0 0 chr2 214523789 214523812 -38732771 + AT_rich Low_complexity Low_complexity 1 23 0 206 226 183 21 chr2 214524043 214524136 -38732447 - MIR SINE MIR 0 262 155 389 300 189 6 chr2 214524168 214524348 -38732235 + MIR SINE MIR 49 261 -1 * 454 287 81 7 chr2 214524338 214524474 -38732109 - MIR SINE MIR -101 161 16 640 254 79 6 chr2 214525128 214525293 -38731290 + MER45A DNA AcHobo 1 177 -1 305 306 78 41 chr2 214525961 214526203 -38730380 + L3b LINE CR1 1108 1358 -225 431 248 134 25 chr2 214526535 214526737 -38729846 + L1M4 LINE L1 5180 5403 -743 2341 82 3 0 chr2 214526738 214527032 -38729551 + AluY SINE Alu 1 295 -16 339 130 0 0 chr2 214527034 214527088 -38729495 + (TA)n Simple_repeat Simple_repeat 1 54 0 198 71 0 0 chr2 214527087 214527115 -38729468 + (GA)n Simple_repeat Simple_repeat 2 29 0 * 423 0 0 0 chr2 214527442 214527489 -38729094 + (GA)n Simple_repeat Simple_repeat 2 48 0 566 212 29 15 chr2 214529648 214529785 -38726798 + MIR SINE MIR 114 252 -10 294 29 0 0 chr2 214530538 214530573 -38726010 + (TG)n Simple_repeat Simple_repeat 2 36 0 4931 70 0 5 chr2 214532979 214533632 -38722951 - L1PA8 LINE L1 0 6172 5523 24 0 0 0 chr2 214534569 214534593 -38721990 + AT_rich Low_complexity Low_complexity 1 24 0 2549 256 190 20 chr2 214534687 214536095 -38720488 - L2 LINE L2 -9 3304 1662 204 313 104 26 chr2 214537136 214537288 -38719295 + MIR SINE MIR 30 190 -72 1001 288 69 28 chr2 214538176 214538613 -38717970 + Tigger8 DNA MER2_type 25 479 -187 204 40 0 0 chr2 214538667 214538692 -38717891 + (TATG)n Simple_repeat Simple_repeat 3 27 0 487 299 24 24 chr2 214540869 214541033 -38715550 - MIR SINE MIR -47 215 52 355 301 74 42 chr2 214541335 214541551 -38715032 + L2 LINE L2 2565 2787 -527 435 305 63 42 chr2 214542496 214542735 -38713848 + L2 LINE L2 2804 3047 -225 192 209 70 0 chr2 214543301 214543344 -38713239 - MIR SINE MIR -2 260 215 187 269 96 19 chr2 214543640 214543692 -38712891 - MIR3 SINE MIR -140 68 13 198 71 0 0 chr2 214543938 214543966 -38712617 + (TG)n Simple_repeat Simple_repeat 2 29 0 229 238 36 60 chr2 214544264 214544348 -38712235 + MIR SINE MIR 34 115 -93 251 182 0 0 chr2 214544462 214544506 -38712077 + MIR SINE MIR 102 145 -63 21 36 0 0 chr2 214544706 214544734 -38711849 + AT_rich Low_complexity Low_complexity 1 28 0 207 161 0 0 chr2 214545602 214545633 -38710950 + polypyrimidine Low_complexity Low_complexity 5 35 0 592 147 147 0 chr2 214545856 214545972 -38710611 - FLAM_C SINE Alu -5 138 6 210 231 13 26 chr2 214546433 214546511 -38710072 + T-rich Low_complexity Low_complexity 3 79 0 201 331 48 32 chr2 214548869 214548993 -38707590 - L2 LINE L2 -1 3312 3187 824 249 18 76 chr2 214550275 214550552 -38706031 + MIR SINE MIR 2 262 0 2115 109 3 10 chr2 214550625 214550919 -38705664 - AluSx SINE Alu -8 304 13 628 303 84 58 chr2 214551418 214551549 -38705034 - LTR33 LTR ERVL 0 521 395 2527 45 0 10 chr2 214551549 214551859 -38704724 + AluY SINE Alu 1 307 -4 628 303 84 58 chr2 214551859 214552212 -38704371 - LTR33 LTR ERVL -126 395 24 2029 140 0 13 chr2 214552701 214553008 -38703575 + AluSx SINE Alu 1 303 -9 1479 52 0 0 chr2 214553067 214553241 -38703342 + AluY SINE Alu 122 295 -16 2643 182 46 4 chr2 214553891 214554413 -38702170 - L1MD3 LINE L1 -49 7946 7403 283 241 0 0 chr2 214554415 214554469 -38702114 - MLT1F1 LTR MaLR -445 122 69 674 119 23 102 chr2 214554474 214554651 -38701932 - L1MD3 LINE L1 -877 7118 6956 397 277 93 8 chr2 214554653 214554892 -38701691 - L1M3 LINE L1 -732 5439 5184 892 259 45 19 chr2 214555260 214555619 -38700964 + L1ME LINE L1 4313 4680 -1466 3369 58 5 0 chr2 214555728 214556161 -38700422 + L1P LINE L1 2 436 -5710 38513 33 23 1 chr2 214556261 214561738 -38694845 - L1PA2 LINE L1 -71 6084 484 796 235 131 38 chr2 214561848 214562155 -38694428 + L1ME LINE L1 5499 5845 -347 736 275 7 66 chr2 214562292 214562579 -38694004 - L2 LINE L2 0 3313 3044 319 247 49 0 chr2 214562616 214562697 -38693886 + HAL1b LINE L1 829 913 -435 23 0 0 0 chr2 214562845 214562868 -38693715 + AT_rich Low_complexity Low_complexity 1 23 0 184 295 42 42 chr2 214562892 214562987 -38693596 + L3 LINE CR1 1082 1176 -401 1095 217 70 98 chr2 214564310 214564841 -38691742 + MER34 LTR ERV1 27 542 0 29 28 0 0 chr2 214564860 214564896 -38691687 + AT_rich Low_complexity Low_complexity 1 36 0 21 57 0 0 chr2 214565250 214565285 -38691298 + AT_rich Low_complexity Low_complexity 1 35 0 352 323 15 8 chr2 214565848 214565981 -38690602 + CT-rich Low_complexity Low_complexity 4 137 0 2322 97 3 3 chr2 214566559 214566867 -38689716 + AluSx SINE Alu 1 308 -4 515 269 13 13 chr2 214568221 214568377 -38688206 + L2 LINE L2 3158 3313 0 2236 76 48 25 chr2 214569026 214569380 -38687203 + L1MA1 LINE L1 5941 6302 0 279 336 42 35 chr2 214569683 214569826 -38686757 - L2 LINE L2 -1 3312 3169 22 0 0 0 chr2 214570165 214570187 -38686396 + AT_rich Low_complexity Low_complexity 1 22 0 495 297 160 21 chr2 214570405 214570968 -38685615 - L1ME3A LINE L1 -213 5957 5317 1319 123 99 8 chr2 214571002 214571254 -38685329 - L1MA4 LINE L1 0 6300 6026 463 255 100 42 chr2 214571712 214571951 -38684632 - HAL1 LINE L1 -117 2390 2138 257 260 0 26 chr2 214571960 214572037 -38684546 + (TG)n Simple_repeat Simple_repeat 2 76 0 264 288 18 36 chr2 214572040 214572151 -38684432 + GA-rich Low_complexity Low_complexity 4 112 0 831 272 139 10 chr2 214573410 214573711 -38682872 - L2 LINE L2 -1 3312 2973 298 169 68 0 chr2 214573746 214573805 -38682778 - L2 LINE L2 -456 2858 2796 948 242 64 74 chr2 214573808 214574201 -38682382 + MLT1D LTR MaLR 3 391 -114 369 188 62 0 chr2 214574325 214574405 -38682178 + MLT1D LTR MaLR 418 502 -3 494 238 145 23 chr2 214574407 214574710 -38681873 - L2 LINE L2 -520 2794 2455 2170 103 4 0 chr2 214575915 214576196 -38680387 + AluSq SINE Alu 1 282 -31 212 0 36 0 chr2 214576199 214576227 -38680356 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 270 352 0 0 chr2 214578101 214578206 -38678377 + L1M4 LINE L1 3739 3843 -2303 1619 126 71 0 chr2 214578209 214578448 -38678135 + AluSc SINE Alu 1 256 -53 6065 156 11 15 chr2 214578777 214579931 -38676652 - L1PB2 LINE L1 -3 6148 5002 1978 140 40 32 chr2 214579931 214580302 -38676281 + THE1C LTR MaLR 1 374 -1 6065 156 11 15 chr2 214580302 214580970 -38675613 - L1PB2 LINE L1 -1149 5002 4333 216 254 48 0 chr2 214581762 214581825 -38674758 - MIR SINE MIR -62 146 81 200 239 65 0 chr2 214581984 214582030 -38674553 + L2 LINE L2 3261 3309 -4 2594 44 0 0 chr2 214582349 214582647 -38673936 + AluY SINE Alu 1 298 -13 407 250 36 27 chr2 214582873 214582985 -38673598 - MIR SINE MIR -35 227 115 1444 276 59 17 chr2 214583225 214583768 -38672815 - HAL1 LINE L1 -552 1955 1390 399 252 94 6 chr2 214583847 214584006 -38672577 - HAL1 LINE L1 -1563 944 772 1057 235 151 69 chr2 214584135 214584598 -38671985 - MLT1F LTR MaLR -39 503 3 589 275 82 91 chr2 214584620 214585281 -38671302 - HAL1 LINE L1 -1837 670 16 499 241 7 55 chr2 214586434 214586579 -38670004 - MER20 DNA MER1_type -2 217 80 529 329 92 29 chr2 214587578 214587818 -38668765 - L2 LINE L2 -4 3268 3014 2559 145 2 40 chr2 214587941 214588390 -38668193 - Tigger2a DNA MER2_type 0 434 3 194 152 0 22 chr2 214588531 214588577 -38668006 + (TGAA)n Simple_repeat Simple_repeat 1 45 0 239 281 49 12 chr2 214588712 214588794 -38667789 + L2 LINE L2 3187 3271 -1 440 324 35 88 chr2 214589012 214589355 -38667228 + L2 LINE L2 2579 2903 -411 247 371 105 8 chr2 214590963 214591087 -38665496 - L2 LINE L2 -4 3268 3133 309 260 221 0 chr2 214591351 214591455 -38665128 + MIR3 SINE MIR 36 162 -46 216 0 0 0 chr2 214591686 214591710 -38664873 + (A)n Simple_repeat Simple_repeat 1 24 0 3629 176 24 16 chr2 214591926 214592682 -38663901 - L1MB8 LINE L1 -4 6174 5413 549 25 38 0 chr2 214594531 214594610 -38661973 + (TC)n Simple_repeat Simple_repeat 2 83 0 284 290 60 30 chr2 214594682 214594782 -38661801 - MIR SINE MIR -65 143 41 189 0 0 0 chr2 214596411 214596432 -38660151 + (T)n Simple_repeat Simple_repeat 1 21 0 534 359 42 4 chr2 214596852 214597089 -38659494 + MIR SINE MIR 16 261 -1 2118 102 0 7 chr2 214597113 214597407 -38659176 - AluSx SINE Alu 0 312 21 396 274 276 32 chr2 214598930 214599310 -38657273 - L2 LINE L2 -8 3305 2833 4828 172 18 36 chr2 214599328 214601244 -38655339 - L1MA9 LINE L1 0 6312 4433 2007 137 20 191 chr2 214601244 214601931 -38654652 + L1MA9 LINE L1 3862 4431 -1715 181 308 0 15 chr2 214602422 214602487 -38654096 + L2 LINE L2 3246 3309 -4 297 313 52 10 chr2 214602633 214602729 -38653854 + L2 LINE L2 3159 3258 -14 521 262 171 9 chr2 214602925 214603135 -38653448 + MER112 DNA MER1_type 11 254 -6 405 202 61 9 chr2 214603726 214603840 -38652743 + MLT1H LTR MaLR 1 120 -429 180 202 32 106 chr2 214605776 214605870 -38650713 - L2 LINE L2 -1309 2005 1919 390 294 42 21 chr2 214607348 214607491 -38649092 + L2 LINE L2 3158 3303 -10 1284 253 86 26 chr2 214607559 214607806 -38648777 - MER69B DNA AcHobo -1300 1226 995 2095 121 0 19 chr2 214607806 214608121 -38648462 - AluSx SINE Alu -3 309 1 1284 253 86 26 chr2 214608121 214608692 -38647891 - MER69B DNA AcHobo -1531 995 298 419 468 13 21 chr2 214608757 214608991 -38647592 + (TA)n Simple_repeat Simple_repeat 1 231 0 189 0 0 0 chr2 214609003 214609024 -38647559 + (TA)n Simple_repeat Simple_repeat 2 22 0 355 338 44 0 chr2 214609073 214609209 -38647374 + MER69 DNA AcHobo 298 439 -2087 282 117 22 86 chr2 214609209 214609455 -38647128 + (TA)n Simple_repeat Simple_repeat 1 230 0 373 163 15 102 chr2 214609471 214609667 -38646916 + (TA)n Simple_repeat Simple_repeat 1 179 0 257 245 52 26 chr2 214610090 214610245 -38646338 + (CATA)n Simple_repeat Simple_repeat 2 160 0 * 374 142 20 137 chr2 214610163 214610367 -38646216 + (TA)n Simple_repeat Simple_repeat 1 180 0 201 181 21 109 chr2 214610284 214610477 -38646106 + (TATATG)n Simple_repeat Simple_repeat 3 178 0 * 243 192 17 87 chr2 214610461 214610633 -38645950 + (TATAA)n Simple_repeat Simple_repeat 5 164 0 * 338 165 39 55 chr2 214610585 214610767 -38645816 + (TA)n Simple_repeat Simple_repeat 2 180 0 1007 301 14 3 chr2 214610768 214611050 -38645533 - MER69 DNA AcHobo -2241 285 1 2086 139 3 3 chr2 214612537 214612846 -38643737 - AluSx SINE Alu -3 309 1 2194 129 0 0 chr2 214613028 214613338 -38643245 - AluSg SINE Alu 0 310 1 21 36 0 0 chr2 214616263 214616291 -38640292 + AT_rich Low_complexity Low_complexity 1 28 0 288 295 98 26 chr2 214616410 214616603 -38639980 - MIR SINE MIR -28 234 28 7638 20 15 0 chr2 214616881 214617903 -38638680 - L1PA3 LINE L1 0 6155 5129 2166 96 3 0 chr2 214618305 214618622 -38637961 - AluSx SINE Alu 0 319 2 26 30 0 0 chr2 214618630 214618663 -38637920 + AT_rich Low_complexity Low_complexity 1 33 0 273 210 0 0 chr2 214618840 214618902 -38637681 + (TA)n Simple_repeat Simple_repeat 2 63 0 993 244 52 9 chr2 214620960 214621190 -38635393 - MIR SINE MIR -22 240 1 2168 146 11 19 chr2 214622239 214622616 -38633967 - THE1C LTR MaLR 0 375 2 209 111 0 123 chr2 214623225 214623306 -38633277 + (TTAA)n Simple_repeat Simple_repeat 3 73 0 1507 196 3 3 chr2 214623543 214623865 -38632718 + MER33 DNA MER1_type 1 322 -2 564 211 9 0 chr2 214623967 214624081 -38632502 - MER94 DNA DNA -18 116 2 375 23 0 0 chr2 214625483 214625527 -38631056 + (TA)n Simple_repeat Simple_repeat 1 44 0 2077 113 3 13 chr2 214626431 214626733 -38629850 + AluSq SINE Alu 1 299 -14 297 0 0 0 chr2 214627480 214627513 -38629070 + (TA)n Simple_repeat Simple_repeat 1 33 0 1490 65 0 5 chr2 214627521 214627720 -38628863 - L1PA5 LINE L1 0 6154 5957 259 293 154 41 chr2 214628065 214628188 -38628395 + L2 LINE L2 3109 3245 -27 279 54 0 0 chr2 214629954 214629991 -38626592 + (CA)n Simple_repeat Simple_repeat 2 38 0 180 0 0 0 chr2 214629990 214630010 -38626573 + (TA)n Simple_repeat Simple_repeat 2 21 0 * 206 279 25 33 chr2 214630251 214630373 -38626210 + (TA)n Simple_repeat Simple_repeat 1 121 0 229 174 72 0 chr2 214630376 214630445 -38626138 + L1MCa LINE L1 1995 2068 -4358 249 221 0 63 chr2 214630449 214630544 -38626039 + L1MC4 LINE L1 6614 6702 -1340 432 181 0 0 chr2 214630546 214630629 -38625954 + (TATATG)n Simple_repeat Simple_repeat 2 84 0 276 154 0 0 chr2 214630633 214630685 -38625898 + L1MC4 LINE L1 6652 6703 -1339 339 213 0 0 chr2 214630686 214630761 -38625822 + (TATATG)n Simple_repeat Simple_repeat 6 80 0 228 216 0 0 chr2 214630761 214630812 -38625771 + L1MC4 LINE L1 6652 6702 -1340 4720 183 22 25 chr2 214630941 214632310 -38624273 - L1MB3 LINE L1 0 6183 4817 183 323 31 0 chr2 214632402 214632467 -38624116 + L2 LINE L2 2898 2964 -349 441 318 16 4 chr2 214633011 214633152 -38623431 - MIR SINE MIR -61 147 7 320 214 119 56 chr2 214633166 214633292 -38623291 + MARNA DNA Mariner 104 237 -349 656 268 62 40 chr2 214634358 214634582 -38622001 + MIR SINE MIR 13 241 -21 21 36 0 0 chr2 214634827 214634855 -38621728 + AT_rich Low_complexity Low_complexity 1 28 0 24 53 0 0 chr2 214635236 214635274 -38621309 + AT_rich Low_complexity Low_complexity 1 38 0 238 254 0 14 chr2 214635672 214635743 -38620840 + (TGAA)n Simple_repeat Simple_repeat 4 73 0 23 54 0 0 chr2 214636044 214636081 -38620502 + AT_rich Low_complexity Low_complexity 1 37 0 341 131 143 12 chr2 214636194 214636278 -38620305 - L1MA4 LINE L1 -98 6202 6108 576 132 0 0 chr2 214636278 214636369 -38620214 + L1MA4 LINE L1 6205 6295 -5 36 0 0 0 chr2 214636369 214636405 -38620178 + AT_rich Low_complexity Low_complexity 1 36 0 626 238 47 35 chr2 214636622 214636794 -38619789 - MIR SINE MIR -23 239 66 216 241 60 86 chr2 214636991 214637107 -38619476 - L2 LINE L2 -1401 1913 1801 22 0 0 0 chr2 214637235 214637257 -38619326 + AT_rich Low_complexity Low_complexity 1 22 0 343 328 56 33 chr2 214637927 214638107 -38618476 + MER5A DNA MER1_type 1 184 -5 2532 161 25 5 chr2 214638526 214638973 -38617610 + MSTB2 LTR MaLR 1 456 -1 389 293 43 0 chr2 214639543 214639659 -38616924 + MIR SINE MIR 33 153 -55 261 0 0 0 chr2 214640138 214640167 -38616416 + (T)n Simple_repeat Simple_repeat 1 29 0 1324 199 30 37 chr2 214640209 214640506 -38616077 - AluJo SINE Alu -17 295 1 490 293 96 79 chr2 214640764 214642229 -38614354 - L1M4 LINE L1 -2202 3944 2456 481 283 33 15 chr2 214642237 214642509 -38614074 - L1M4 LINE L1 -3756 2390 2114 311 285 181 22 chr2 214643255 214643658 -38612925 - L1MC5 LINE L1 -224 7737 7271 348 315 121 41 chr2 214643667 214643981 -38612602 - L1MC4 LINE L1 -604 7438 7100 682 306 78 16 chr2 214644215 214644535 -38612048 - L1MC4a LINE L1 -906 6902 6563 21 0 0 0 chr2 214644797 214644818 -38611765 + AT_rich Low_complexity Low_complexity 1 21 0 2013 125 0 19 chr2 214645283 214645594 -38610989 - AluSq SINE Alu -8 305 1 24 67 0 0 chr2 214649004 214649049 -38607534 + AT_rich Low_complexity Low_complexity 1 45 0 1613 161 82 25 chr2 214649561 214649878 -38606705 + MER1B DNA MER1_type 3 337 0 251 161 129 0 chr2 214649908 214649970 -38606613 - MER103 DNA DNA -23 143 74 1192 233 53 72 chr2 214651634 214652200 -38604383 + MLT1H1 LTR MaLR 1 555 0 1347 165 25 113 chr2 214652315 214652715 -38603868 - MLT1A1 LTR MaLR 0 365 1 774 273 81 46 chr2 214653595 214654407 -38602176 - L1MC4a LINE L1 -586 5578 4906 2150 276 107 14 chr2 214654418 214655274 -38601309 - L1MC4a LINE L1 -1941 4205 3229 1270 141 117 99 chr2 214655274 214655607 -38600976 - MER44D DNA MER2_type 0 609 1 2150 276 107 14 chr2 214655607 214655814 -38600769 - L1MC4a LINE L1 -2917 3229 3043 2201 114 0 3 chr2 214655961 214656260 -38600323 - AluSg SINE Alu -12 298 1 317 320 99 22 chr2 214656559 214656781 -38599802 - L1M4 LINE L1 -2813 3333 3095 904 262 99 40 chr2 214656840 214657443 -38599140 - L1MC5 LINE L1 -53 7908 7270 438 246 33 99 chr2 214657607 214657879 -38598704 - L1M4 LINE L1 -3177 2969 2716 462 244 137 34 chr2 214658046 214658374 -38598209 - L1M4 LINE L1 -3552 2594 2233 1953 114 0 30 chr2 214661847 214662144 -38594439 - AluSc SINE Alu -21 288 1 1938 114 0 0 chr2 214662175 214662474 -38594109 - AluSq SINE Alu 0 339 41 304 305 78 31 chr2 214664841 214664969 -38591614 + L2 LINE L2 3137 3270 -2 189 343 89 38 chr2 214665359 214665572 -38591011 - L2 LINE L2 -2858 456 233 27 81 0 0 chr2 214665915 214665977 -38590606 + AT_rich Low_complexity Low_complexity 1 62 0 236 274 32 63 chr2 214666117 214666212 -38590371 + L2 LINE L2 3146 3237 -35 275 353 69 17 chr2 214666322 214666438 -38590145 - L2 LINE L2 -26 3246 3125 473 227 0 45 chr2 214666633 214666743 -38589840 - L2 LINE L2 -18 3295 3191 262 293 138 8 chr2 214669267 214669390 -38587193 - MIR3 SINE MIR -28 180 42 23 0 0 0 chr2 214669434 214669457 -38587126 + AT_rich Low_complexity Low_complexity 1 23 0 471 339 36 31 chr2 214670355 214670547 -38586036 + MIR3 SINE MIR 9 201 -7 726 163 112 51 chr2 214670582 214670760 -38585823 + MER5A DNA MER1_type 1 189 0 252 0 0 0 chr2 214670874 214670902 -38585681 + (TG)n Simple_repeat Simple_repeat 2 29 0 25 0 0 0 chr2 214672267 214672292 -38584291 + AT_rich Low_complexity Low_complexity 1 25 0 22 56 0 0 chr2 214673355 214673391 -38583192 + AT_rich Low_complexity Low_complexity 1 36 0 3890 165 59 56 chr2 214673405 214675084 -38581499 + L1MB7 LINE L1 4519 6174 -10 825 230 5 35 chr2 214675106 214675306 -38581277 + MLT1F LTR MaLR 349 542 0 2092 85 41 14 chr2 214675827 214676120 -38580463 + AluY SINE Alu 1 301 -10 325 227 56 3 chr2 214676120 214676469 -38580114 + (TA)n Simple_repeat Simple_repeat 1 367 0 243 135 0 0 chr2 214677890 214677927 -38578656 - tRNA-Glu-GAG tRNA tRNA -38 37 1 723 250 11 6 chr2 214678131 214678307 -38578276 + MIR SINE MIR 45 221 -41 586 192 23 39 chr2 214678702 214678832 -38577751 + FLAM_A SINE Alu 2 129 -4 2310 100 3 6 chr2 214679181 214679492 -38577091 - AluSp SINE Alu -3 310 1 456 19 0 0 chr2 214679521 214679574 -38577009 + (TG)n Simple_repeat Simple_repeat 2 54 0 478 288 95 31 chr2 214680333 214680555 -38576028 + MIR SINE MIR 27 262 0 191 322 119 0 chr2 214680643 214680702 -38575881 + L2 LINE L2 3246 3311 -2 258 288 0 15 chr2 214681502 214681568 -38575015 + CT-rich Low_complexity Low_complexity 3 67 0 331 354 81 19 chr2 214681801 214682010 -38574573 + MIR SINE MIR 14 235 -27 2238 116 0 0 chr2 214682694 214682997 -38573586 - AluSx SINE Alu -9 303 1 213 313 0 62 chr2 214682997 214683077 -38573506 - MIR3 SINE MIR -41 167 93 21 0 0 0 chr2 214684062 214684083 -38572500 + AT_rich Low_complexity Low_complexity 1 21 0 270 0 0 0 chr2 214686437 214686467 -38570116 + (TG)n Simple_repeat Simple_repeat 2 31 0 207 290 32 0 chr2 214687528 214687590 -38568993 - MIR SINE MIR -62 146 83 217 250 288 25 chr2 214688304 214688464 -38568119 + MIR SINE MIR 5 206 -56 22 56 0 0 chr2 214688902 214688938 -38567645 + AT_rich Low_complexity Low_complexity 1 36 0 276 30 0 0 chr2 214690960 214690993 -38565590 + (CA)n Simple_repeat Simple_repeat 2 34 0 2039 117 3 13 chr2 214692543 214692842 -38563741 + AluSg SINE Alu 1 296 -14 226 264 0 0 chr2 214693288 214693341 -38563242 - MIR SINE MIR -109 153 101 324 272 35 83 chr2 214694233 214694402 -38562181 + MIR SINE MIR 79 239 -23 32 67 0 0 chr2 214697509 214697569 -38559014 + AT_rich Low_complexity Low_complexity 1 60 0 252 318 182 6 chr2 214698971 214699141 -38557442 - L2 LINE L2 -8 3305 3106 476 286 45 63 chr2 214699214 214699461 -38557122 + L1ME4a LINE L1 5590 5831 -290 2575 14 0 17 chr2 214699461 214699755 -38556828 + AluYb8 SINE Alu 30 318 0 476 286 45 63 chr2 214699755 214699839 -38556744 + L1ME4a LINE L1 5831 5915 -206 25 0 0 0 chr2 214699924 214699949 -38556634 + AT_rich Low_complexity Low_complexity 1 25 0 2189 118 13 3 chr2 214699993 214700299 -38556284 + AluSx SINE Alu 4 312 0 462 298 30 0 chr2 214700446 214700577 -38556006 + L3 LINE CR1 1178 1312 -265 202 281 0 18 chr2 214700604 214700661 -38555922 + CT-rich Low_complexity Low_complexity 5 60 0 558 258 141 14 chr2 214701438 214701651 -38554932 + MIR SINE MIR 23 262 0 25 0 0 0 chr2 214701777 214701802 -38554781 + AT_rich Low_complexity Low_complexity 1 25 0 623 302 65 12 chr2 214704858 214705106 -38551477 + MIR SINE MIR 2 262 0 505 245 170 19 chr2 214705644 214705803 -38550780 + MIR SINE MIR 11 193 -69 251 220 0 0 chr2 214705856 214705906 -38550677 + L2 LINE L2 3264 3313 0 967 210 16 0 chr2 214706316 214706502 -38550081 + MER5A DNA MER1_type 1 189 0 1816 155 7 7 chr2 214707215 214707505 -38549078 + AluJb SINE Alu 3 292 -20 225 197 49 0 chr2 214709404 214709465 -38547118 + (CAAA)n Simple_repeat Simple_repeat 2 65 0 201 209 23 0 chr2 214709625 214709668 -38546915 - L2 LINE L2 -2 3311 3268 252 291 60 44 chr2 214709678 214709860 -38546723 - L2 LINE L2 -14 3299 3115 203 182 23 0 chr2 214710100 214710144 -38546439 + GA-rich Low_complexity Low_complexity 5 49 0 737 252 182 61 chr2 214710275 214710758 -38545825 - MLT1H LTR MaLR 0 555 30 242 294 0 59 chr2 214711321 214711406 -38545177 + MIR3 SINE MIR 125 204 -4 22 0 0 0 chr2 214713233 214713255 -38543328 + AT_rich Low_complexity Low_complexity 1 22 0 188 306 21 164 chr2 214715226 214715346 -38541237 - L2 LINE L2 -26 3246 3186 2281 85 0 3 chr2 214715346 214715658 -38540925 + AluSg SINE Alu 3 313 0 188 306 21 164 chr2 214715658 214715817 -38540766 - L2 LINE L2 -86 3186 3006 249 222 4 0 chr2 214716846 214716911 -38539672 + MLT1I LTR MaLR 98 146 -263 240 239 152 22 chr2 214717053 214717145 -38539438 + MLT1I LTR MaLR 281 384 -25 2454 44 0 7 chr2 214719114 214719408 -38537175 + AluY SINE Alu 1 292 -19 2024 117 44 3 chr2 214719464 214719762 -38536821 - AluSx SINE Alu -2 310 1 241 123 46 31 chr2 214720860 214720925 -38535658 + (TCTA)n Simple_repeat Simple_repeat 1 66 0 183 307 40 13 chr2 214720938 214721013 -38535570 - L2 LINE L2 -2586 728 652 27 49 0 0 chr2 214721451 214721492 -38535091 + AT_rich Low_complexity Low_complexity 1 41 0 670 137 0 0 chr2 214722022 214722124 -38534459 - AluS SINE Alu -211 102 1 927 264 9 0 chr2 214722536 214722752 -38533831 + MER20 DNA MER1_type 1 218 -1 378 0 0 0 chr2 214722958 214723000 -38533583 + (TG)n Simple_repeat Simple_repeat 1 42 0 1658 137 49 21 chr2 214723554 214723883 -38532700 + L1MA8 LINE L1 5941 6278 -13 14532 81 15 16 chr2 214723885 214724340 -38532243 - L1P LINE L1 -3372 2774 2320 207 0 0 0 chr2 214724340 214724363 -38532220 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 14532 81 15 16 chr2 214724363 214726062 -38530521 - L1P LINE L1 -3826 2320 623 641 110 0 0 chr2 214726057 214726148 -38530435 - L1P LINE L1 -6045 101 11 * 7042 56 3 0 chr2 214726152 214727799 -38528784 + L1PA5 LINE L1 4501 6150 -4 32 81 0 0 chr2 214728259 214728333 -38528250 + AT_rich Low_complexity Low_complexity 1 74 0 2257 21 0 0 chr2 214728373 214728656 -38527927 - L1P1 LINE L1 -581 5574 5292 4409 25 0 2 chr2 214728656 214729169 -38527414 + L1PA3 LINE L1 5639 6152 -3 479 300 63 32 chr2 214729302 214729492 -38527091 + MIR SINE MIR 21 216 -46 273 217 0 17 chr2 214731051 214731111 -38525472 + MIR3 SINE MIR 120 178 -30 479 227 52 32 chr2 214732236 214732390 -38524193 + MIR SINE MIR 33 189 -73 601 271 94 20 chr2 214732484 214732687 -38523896 + MIR SINE MIR 41 258 -4 273 302 114 7 chr2 214733188 214733337 -38523246 - MLT1H LTR MaLR -356 193 29 467 299 113 27 chr2 214733420 214733641 -38522942 - MIR SINE MIR 0 262 23 246 62 0 0 chr2 214734760 214734792 -38521791 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 715 217 91 7 chr2 214737072 214737215 -38519368 + FAM SINE Alu 5 159 -16 234 0 0 0 chr2 214737569 214737595 -38518988 + (CA)n Simple_repeat Simple_repeat 2 27 0 1456 114 0 15 chr2 214738268 214738520 -38518063 + AluSg/x SINE Alu 87 335 0 237 206 123 14 chr2 214740033 214740106 -38516477 + MER20 DNA MER1_type 139 219 0 447 324 111 19 chr2 214740196 214740412 -38516171 + MIR SINE MIR 7 242 -20 437 347 17 23 chr2 214740512 214740685 -38515898 + MIR SINE MIR 77 248 -14 327 49 0 0 chr2 214741027 214741068 -38515515 + (GA)n Simple_repeat Simple_repeat 1 41 0 22 0 0 0 chr2 214741206 214741228 -38515355 + AT_rich Low_complexity Low_complexity 1 22 0 188 295 51 39 chr2 214741617 214741695 -38514888 + MIR3 SINE MIR 6 84 -124 467 202 11 0 chr2 214741757 214741851 -38514732 + MIR3 SINE MIR 109 203 -5 25 0 0 0 chr2 214742155 214742180 -38514403 + AT_rich Low_complexity Low_complexity 1 25 0 2292 87 3 0 chr2 214742678 214742976 -38513607 - AluSp SINE Alu -14 299 1 198 143 0 0 chr2 214743524 214743559 -38513024 + (T)n Simple_repeat Simple_repeat 1 35 0 270 267 99 23 chr2 214743722 214743853 -38512730 + MIR SINE MIR 65 205 -57 198 0 0 0 chr2 214743910 214743932 -38512651 + (CAG)n Simple_repeat Simple_repeat 2 23 0 25 31 0 0 chr2 214745634 214745666 -38510917 + AT_rich Low_complexity Low_complexity 1 32 0 26 50 0 0 chr2 214745924 214745964 -38510619 + AT_rich Low_complexity Low_complexity 1 40 0 307 309 0 25 chr2 214746060 214746141 -38510442 + MIR SINE MIR 10 88 -174 221 298 138 21 chr2 214746167 214746261 -38510322 + L2 LINE L2 3204 3308 -5 354 266 139 21 chr2 214749979 214750317 -38506266 - L1ME4a LINE L1 -5 6116 5739 327 345 197 10 chr2 214750484 214750687 -38505896 - MIR SINE MIR -8 254 14 1046 132 0 113 chr2 214750770 214750974 -38505609 + AluSp SINE Alu 1 181 -132 1122 75 31 31 chr2 214751061 214751220 -38505363 + AluY SINE Alu 144 302 -9 641 129 0 0 chr2 214751510 214751603 -38504980 + Tigger3b DNA MER2_type 1 93 -1138 4737 115 87 0 chr2 214751606 214752478 -38504105 + Tigger3b DNA MER2_type 281 1228 -3 994 214 48 0 chr2 214754189 214754399 -38502184 - MER58A DNA MER1_type 0 224 5 2454 83 0 0 chr2 214754757 214755058 -38501525 + AluY SINE Alu 1 301 -10 363 296 177 24 chr2 214755427 214755761 -38500822 - MLT1J2 LTR MaLR -28 422 38 210 318 159 13 chr2 214755818 214755969 -38500614 - L2 LINE L2 -210 3062 2890 1222 231 112 76 chr2 214756439 214756477 -38500106 - MLT2B1 LTR ERVL 0 520 485 396 0 0 0 chr2 214756477 214756521 -38500062 + (TG)n Simple_repeat Simple_repeat 1 44 0 1222 231 112 76 chr2 214756521 214756984 -38499599 - MLT2B1 LTR ERVL -35 485 1 2390 70 0 0 chr2 214757207 214757493 -38499090 + AluY SINE Alu 1 286 -25 233 209 0 0 chr2 214757504 214757547 -38499036 + (CATA)n Simple_repeat Simple_repeat 2 44 0 495 268 128 0 chr2 214757549 214757713 -38498870 - MIR SINE MIR -73 189 5 228 35 0 0 chr2 214758001 214758030 -38498553 + (TG)n Simple_repeat Simple_repeat 2 30 0 21 0 0 0 chr2 214758830 214758851 -38497732 + AT_rich Low_complexity Low_complexity 1 21 0 277 318 43 107 chr2 214759704 214760031 -38496552 - L2 LINE L2 -50 3222 2917 316 328 176 48 chr2 214760700 214761057 -38495526 - L2 LINE L2 0 3272 2870 192 77 0 0 chr2 214761530 214761556 -38495027 + (A)n Simple_repeat Simple_repeat 1 26 0 201 129 0 0 chr2 214761887 214761918 -38494665 + (TC)n Simple_repeat Simple_repeat 2 32 0 491 217 123 7 chr2 214763321 214763471 -38493112 + MIR3 SINE MIR 37 205 -3 404 268 65 22 chr2 214763975 214764113 -38492470 - MIR SINE MIR -2 260 117 716 276 28 18 chr2 214764365 214764582 -38492001 - MIR SINE MIR -21 241 23 923 181 0 0 chr2 214764618 214764767 -38491816 - FRAM SINE Alu -30 146 1 29 28 0 0 chr2 214765176 214765212 -38491371 + AT_rich Low_complexity Low_complexity 1 36 0 2145 108 0 46 chr2 214767501 214767845 -38488738 - AluSx SINE Alu 0 329 1 230 171 0 0 chr2 214768531 214768572 -38488011 + MER116 DNA Mariner 35 75 -5 412 297 114 46 chr2 214769339 214769733 -38486850 - L1M4 LINE L1 -1098 5048 4628 387 0 0 0 chr2 214769779 214769822 -38486761 + (TG)n Simple_repeat Simple_repeat 1 43 0 242 275 8 123 chr2 214769846 214770090 -38486493 - L1M4 LINE L1 -2104 4042 3827 389 225 153 0 chr2 214771005 214771116 -38485467 + L3b LINE CR1 1275 1402 -181 33 25 0 0 chr2 214771588 214771628 -38484955 + AT_rich Low_complexity Low_complexity 1 40 0 359 293 30 20 chr2 214771868 214771967 -38484616 - L2 LINE L2 -1 3271 3172 303 140 0 0 chr2 214772213 214772263 -38484320 + (CA)n Simple_repeat Simple_repeat 2 51 0 246 361 210 28 chr2 214772520 214772982 -38483601 + L3 LINE CR1 47 592 -985 286 297 117 72 chr2 214773323 214773572 -38483011 - L2 LINE L2 0 3313 3054 190 246 0 18 chr2 214773576 214773633 -38482950 + L3 LINE CR1 813 868 -709 711 300 71 12 chr2 214773720 214773960 -38482623 + L3 LINE CR1 1008 1261 -316 2369 83 3 0 chr2 214774302 214774603 -38481980 + AluSp SINE Alu 1 302 -11 249 273 0 0 chr2 214776125 214776202 -38480381 + T-rich Low_complexity Low_complexity 1 77 0 13977 81 5 1 chr2 214776204 214778869 -38477714 - L1PA7 LINE L1 0 6154 3477 4631 28 0 0 chr2 214778963 214779507 -38477076 - L1PA2 LINE L1 -1 6154 5611 21902 27 0 0 chr2 214779507 214782132 -38474451 + L1P LINE L1 2532 5156 -990 45 45 0 0 chr2 214782314 214782380 -38474203 + AT_rich Low_complexity Low_complexity 1 66 0 1605 107 24 0 chr2 214782544 214782796 -38473787 + L1MA2 LINE L1 6042 6299 -5 751 189 0 0 chr2 214782830 214782957 -38473626 + FLAM_C SINE Alu 1 127 -6 41 0 0 0 chr2 214782957 214782998 -38473585 + AT_rich Low_complexity Low_complexity 1 41 0 479 332 43 7 chr2 214783149 214783450 -38473133 - L1ME4a LINE L1 -288 5833 5522 298 244 101 42 chr2 214784113 214784232 -38472351 - L2 LINE L2 -1 3312 3187 418 223 61 61 chr2 214784990 214785138 -38471445 + MER103 DNA DNA 17 164 -2 446 333 30 7 chr2 214785695 214785830 -38470753 - MIR SINE MIR -115 147 10 312 296 0 20 chr2 214786230 214786328 -38470255 + 7SK RNA RNA 3 98 -95 22 0 0 0 chr2 214786863 214786885 -38469698 + AT_rich Low_complexity Low_complexity 1 22 0 315 226 94 63 chr2 214788194 214788353 -38468230 + L1ME4a LINE L1 5255 5418 -2390 239 277 63 50 chr2 214788585 214788744 -38467839 + L1ME4a LINE L1 5742 5902 -219 309 239 63 31 chr2 214788760 214788777 -38467806 + L1ME4a LINE L1 5947 5962 -159 1702 212 21 0 chr2 214788777 214789116 -38467467 + MER7A DNA MER2_type 2 345 -1 309 239 63 31 chr2 214789116 214789257 -38467326 + L1ME4a LINE L1 5962 6110 -11 430 254 50 123 chr2 214789575 214789934 -38466649 - MLT1J LTR MaLR -69 442 110 290 196 10 59 chr2 214790422 214790524 -38466059 + L1MC4 LINE L1 6605 6701 -1341 315 315 0 0 chr2 214790543 214790632 -38465951 + L1MC4 LINE L1 6615 6703 -1339 2080 131 10 3 chr2 214790641 214790938 -38465645 - AluSg SINE Alu -11 299 1 22 0 0 0 chr2 214791193 214791215 -38465368 + AT_rich Low_complexity Low_complexity 1 22 0 2129 135 0 0 chr2 214791544 214791840 -38464743 + AluSx SINE Alu 1 296 -16 826 220 30 25 chr2 214792648 214792848 -38463735 + L3 LINE CR1 655 855 -722 719 331 66 9 chr2 214792844 214793161 -38463422 + L2 LINE L2 2641 2975 -339 * 962 311 87 37 chr2 214793248 214793955 -38462628 - L2 LINE L2 -5 3308 2574 246 383 9 0 chr2 214793999 214794106 -38462477 + L2 LINE L2 3160 3267 -5 * 586 279 33 50 chr2 214794099 214794339 -38462244 + L3 LINE CR1 865 1100 -477 188 57 0 57 chr2 214794473 214794508 -38462075 + (TCTCTG)n Simple_repeat Simple_repeat 4 36 0 1481 82 24 0 chr2 214794658 214794864 -38461719 + L1PA13 LINE L1 5952 6162 -1 563 295 107 5 chr2 214795050 214795284 -38461299 + MIR SINE MIR 5 256 -6 234 0 0 0 chr2 214796370 214796396 -38460187 + (CCAA)n Simple_repeat Simple_repeat 2 27 0 1034 123 18 0 chr2 214796531 214796701 -38459882 - L1MA3 LINE L1 -1 6304 6132 942 93 0 8 chr2 214796703 214796832 -38459751 + AluY SINE Alu 176 303 -8 2386 80 0 6 chr2 214796834 214797147 -38459436 + AluY SINE Alu 1 311 0 1863 86 28 102 chr2 214797165 214797526 -38459057 - L1MA2 LINE L1 -172 7551 7218 242 0 0 89 chr2 214797663 214797708 -38458875 - L1PA6 LINE L1 0 6154 6114 * 22269 147 21 37 chr2 214797707 214798267 -38458316 - L1MA2 LINE L1 -501 7223 6656 2082 141 115 20 chr2 214798267 214798658 -38457925 - MSTA LTR MaLR 0 428 1 22269 147 21 37 chr2 214798658 214798740 -38457843 - L1MA2 LINE L1 -1068 6656 6574 431 157 0 0 chr2 214798740 214798810 -38457773 - AluS SINE Alu -11 301 232 2191 77 4 0 chr2 214798812 214799086 -38457497 - AluY SINE Alu -36 275 1 22269 147 21 37 chr2 214799086 214803971 -38452612 - L1MA2 LINE L1 -1151 6573 22 2022 143 0 33 chr2 214804076 214804383 -38452200 - AluJb SINE Alu -15 297 1 3421 264 80 35 chr2 214804470 214804914 -38451669 + L1MEc LINE L1 289 712 -5684 1269 226 66 11 chr2 214804914 214805188 -38451395 + AluJo SINE Alu 1 289 -23 3421 264 80 35 chr2 214805188 214806351 -38450232 + L1MEc LINE L1 712 1968 -4428 1697 180 67 6 chr2 214806351 214806696 -38449887 - MER47A DNA MER2_type 0 366 1 362 206 200 0 chr2 214806754 214806909 -38449674 + L1MEc LINE L1 2131 2316 -4080 820 193 0 0 chr2 214806920 214807060 -38449523 + FRAM SINE Alu 1 140 -36 2440 251 32 12 chr2 214807064 214807885 -38448698 + L1MEc LINE L1 2322 3158 -3057 1739 183 0 7 chr2 214807885 214808186 -38448397 + AluJb SINE Alu 1 299 -13 466 159 0 57 chr2 214808194 214808282 -38448301 - Tigger7 DNA MER2_type 0 2587 2505 1342 236 7 11 chr2 214808305 214808581 -38448002 - Tigger7 DNA MER2_type -458 275 1 1250 271 91 15 chr2 214808582 214809177 -38447406 + L1MEc LINE L1 3164 3803 -2412 954 141 32 0 chr2 214809182 214809338 -38447245 + MLT1B LTR MaLR 187 347 -43 455 258 41 5 chr2 214809353 214809515 -38447068 + L1M4 LINE L1 3739 3899 -2247 1828 140 32 7 chr2 214809834 214810139 -38446444 - AluSq SINE Alu 0 312 1 271 302 191 8 chr2 214810851 214810977 -38445606 - L2 LINE L2 -3 3269 3121 635 185 8 8 chr2 214811072 214811191 -38445392 + FLAM_A SINE Alu 1 119 -14 24 67 0 0 chr2 214811191 214811236 -38445347 + AT_rich Low_complexity Low_complexity 1 45 0 22 56 0 0 chr2 214811257 214811293 -38445290 + AT_rich Low_complexity Low_complexity 1 36 0 2366 87 0 10 chr2 214811296 214811596 -38444987 + AluSq SINE Alu 1 297 -16 723 104 0 0 chr2 214811596 214811702 -38444881 + (TA)n Simple_repeat Simple_repeat 2 107 0 270 73 0 0 chr2 214812681 214812722 -38443861 + (TG)n Simple_repeat Simple_repeat 2 42 0 363 201 110 91 chr2 214815496 214815631 -38440952 - MIR SINE MIR -12 250 110 2371 82 3 0 chr2 214815631 214815925 -38440658 + AluSp SINE Alu 1 295 -18 363 201 110 91 chr2 214815925 214815943 -38440640 - MIR SINE MIR -152 110 94 445 232 148 14 chr2 214816042 214816184 -38440399 - MIR SINE MIR -11 251 91 465 317 21 0 chr2 214816517 214816662 -38439921 + MIR SINE MIR 114 261 -1 854 232 57 60 chr2 214817169 214817501 -38439082 - L1M4 LINE L1 -2406 3976 3646 1815 283 44 14 chr2 214817531 214818121 -38438462 - L1MEc LINE L1 -5754 642 35 1779 172 0 43 chr2 214820663 214820989 -38435594 - AluJb SINE Alu 0 312 1 330 26 0 0 chr2 214821127 214821166 -38435417 + (TGG)n Simple_repeat Simple_repeat 1 39 0 2495 55 7 3 chr2 214821345 214821653 -38434930 - AluY SINE Alu -2 309 1 1197 132 6 0 chr2 214821753 214821935 -38434648 - AluSg/x SINE Alu -9 301 119 203 325 34 68 chr2 214823351 214823393 -38433190 - MIR SINE MIR -129 133 91 2288 122 0 0 chr2 214823393 214823704 -38432879 + AluSx SINE Alu 1 311 -1 203 325 34 68 chr2 214823704 214823778 -38432805 - MIR SINE MIR -171 91 21 339 308 54 23 chr2 214824999 214825129 -38431454 - L2 LINE L2 -9 3304 3171 245 362 23 76 chr2 214826506 214826810 -38429773 - L2 LINE L2 -2826 488 201 225 0 0 0 chr2 214826835 214826860 -38429723 + (A)n Simple_repeat Simple_repeat 1 25 0 2450 32 0 3 chr2 214827399 214827710 -38428873 - AluY SINE Alu 0 310 1 3614 217 41 35 chr2 214828068 214828905 -38427678 - MER21B LTR ERV1 -21 842 1 347 373 40 27 chr2 214829062 214829212 -38427371 - L2 LINE L2 0 3272 3121 25 31 0 0 chr2 214830330 214830362 -38426221 + AT_rich Low_complexity Low_complexity 1 32 0 233 304 72 24 chr2 214830901 214831026 -38425557 + L2 LINE L2 2453 2583 -731 737 279 117 52 chr2 214831038 214831407 -38425176 + L2 LINE L2 2913 3305 -8 343 308 38 0 chr2 214831410 214831595 -38424988 - L1MEd LINE L1 -3840 2542 2351 281 300 114 26 chr2 214832116 214832423 -38424160 - L1MEd LINE L1 -4789 1595 1262 3338 116 14 0 chr2 214832524 214833023 -38423560 - Tigger4(Zombi) DNA MER2_type 0 2731 2226 688 184 0 0 chr2 214833021 214833135 -38423448 - Tigger4(Zombi) DNA MER2_type -2617 114 1 * 772 279 25 83 chr2 214833191 214833639 -38422944 - L1MEd LINE L1 -5368 1004 583 207 0 0 0 chr2 214833994 214834017 -38422566 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 213 39 0 0 chr2 214834131 214834157 -38422426 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 1100 214 51 34 chr2 214836239 214836590 -38419993 + L1M4 LINE L1 4918 5274 -872 288 273 0 34 chr2 214836896 214836984 -38419599 - L2 LINE L2 -1025 2289 2205 262 301 0 0 chr2 214839272 214839345 -38417238 + MIR SINE MIR 190 262 0 218 312 123 13 chr2 214840198 214840352 -38416231 - L2 LINE L2 -183 3089 2919 197 182 130 117 chr2 214841725 214841802 -38414781 - MIR SINE MIR -67 195 118 1094 129 40 5 chr2 214842691 214842893 -38413690 + L1MA1 LINE L1 6094 6302 0 252 184 0 20 chr2 214842979 214843028 -38413555 - MLT1L LTR MaLR 0 615 568 2257 120 0 0 chr2 214843033 214843341 -38413242 + AluSg SINE Alu 1 308 -2 224 195 0 0 chr2 214844220 214844261 -38412322 + (CA)n Simple_repeat Simple_repeat 1 41 0 2304 107 0 0 chr2 214844622 214844922 -38411661 + AluSx SINE Alu 1 300 -12 625 282 78 32 chr2 214845229 214845513 -38411070 - MLT1J LTR MaLR -5 506 210 26 30 0 0 chr2 214847224 214847257 -38409326 + AT_rich Low_complexity Low_complexity 1 33 0 2291 98 13 3 chr2 214848304 214848609 -38407974 + AluSq SINE Alu 1 308 -5 361 302 106 13 chr2 214849515 214849750 -38406833 + MIR SINE MIR 5 261 -1 190 333 176 0 chr2 214849891 214849993 -38406590 - L2 LINE L2 -47 3225 3106 * 870 242 43 23 chr2 214849974 214850213 -38406370 + MIR SINE MIR 18 262 0 297 294 106 73 chr2 214850287 214850600 -38405983 - L2 LINE L2 -218 3054 2729 442 364 46 11 chr2 214850612 214850980 -38405603 - L2 LINE L2 -1119 2195 1815 2144 133 0 3 chr2 214851534 214851843 -38404740 + AluSx SINE Alu 1 308 -4 518 117 0 0 chr2 214854167 214854244 -38402339 - MER101 LTR ERV1 -5 469 393 26 0 0 0 chr2 214855201 214855227 -38401356 + AT_rich Low_complexity Low_complexity 1 26 0 241 226 0 0 chr2 214855241 214855303 -38401280 - L1MC4 LINE L1 -1339 6703 6642 2835 139 56 9 chr2 214855494 214855940 -38400643 - MER101 LTR ERV1 -7 467 1 1280 132 9 18 chr2 214856029 214856248 -38400335 - AluJo SINE Alu -9 303 87 552 147 11 0 chr2 214856456 214856551 -38400032 - L1MB2 LINE L1 -9 6162 6067 180 319 0 14 chr2 214857962 214858034 -38398549 + MIR SINE MIR 192 262 0 485 194 163 0 chr2 214858956 214859085 -38397498 + MIR SINE MIR 84 233 -29 286 200 0 17 chr2 214859138 214859198 -38397385 - MIR SINE MIR -112 150 92 395 256 166 34 chr2 214859986 214860354 -38396229 - MLT1K LTR MaLR -6 582 146 655 269 70 40 chr2 214862134 214862324 -38394259 - MIR SINE MIR -11 251 51 1828 150 46 75 chr2 214862324 214862763 -38393820 + MSTC LTR MaLR 1 426 -2 655 269 70 40 chr2 214862763 214862799 -38393784 - MIR SINE MIR -211 51 18 1796 182 45 8 chr2 214863445 214863797 -38392786 + MLT1A1 LTR MaLR 1 365 0 3642 176 4 179 chr2 214863798 214864966 -38391617 + MLT1A1-int LTR MaLR 2 965 -770 1477 152 16 19 chr2 214864971 214865228 -38391355 + MLT1A1 LTR MaLR 110 365 0 287 180 115 40 chr2 214868858 214868997 -38387586 - MIR SINE MIR 0 262 59 378 42 0 0 chr2 214869397 214869445 -38387138 + (TG)n Simple_repeat Simple_repeat 2 49 0 21 0 0 0 chr2 214869618 214869639 -38386944 + AT_rich Low_complexity Low_complexity 1 21 0 230 333 93 9 chr2 214871460 214871568 -38385015 - MIR3 SINE MIR -27 181 65 591 297 35 19 chr2 214871582 214871838 -38384745 + MIR SINE MIR 1 260 -2 207 322 0 0 chr2 214871981 214872040 -38384543 + (TAG)n Simple_repeat Simple_repeat 1 59 0 239 234 62 0 chr2 214872051 214872115 -38384468 - MIR SINE MIR -12 250 183 244 0 56 0 chr2 214872301 214872337 -38384246 + (TA)n Simple_repeat Simple_repeat 1 38 0 183 186 0 0 chr2 214872862 214872905 -38383678 + (TG)n Simple_repeat Simple_repeat 1 43 0 308 280 86 0 chr2 214873063 214873156 -38383427 - MIR SINE MIR -113 149 49 283 297 10 10 chr2 214874328 214874429 -38382154 + GA-rich Low_complexity Low_complexity 4 104 0 1272 158 19 85 chr2 214874683 214874807 -38381776 + AluJo SINE Alu 2 102 -210 2013 105 17 17 chr2 214874807 214875102 -38381481 - AluSx SINE Alu -2 310 16 1272 158 19 85 chr2 214875102 214875236 -38381347 + AluJo SINE Alu 102 243 -69 286 358 17 8 chr2 214875502 214875622 -38380961 + MIR SINE MIR 25 145 -117 1439 169 166 36 chr2 214877081 214877100 -38379483 - LTR54B LTR ERV1 -2 496 481 2378 91 3 0 chr2 214877100 214877397 -38379186 + AluSp SINE Alu 1 298 -15 1668 179 0 41 chr2 214877400 214877718 -38378865 + AluJb SINE Alu 1 305 -7 1439 169 166 36 chr2 214877718 214878133 -38378450 - LTR54B LTR ERV1 -18 480 1 727 299 51 0 chr2 214878372 214878606 -38377977 + MIR SINE MIR 13 258 -4 1036 228 59 64 chr2 214878606 214879065 -38377518 + MLT1D LTR MaLR 1 505 0 314 337 21 0 chr2 214879769 214879864 -38376719 + MER91A DNA MER1_type 18 114 -82 285 250 0 0 chr2 214880917 214880973 -38375610 - L2 LINE L2 -19 3294 3239 2449 64 6 10 chr2 214881071 214881383 -38375200 + AluY SINE Alu 1 311 0 376 229 42 34 chr2 214881554 214881672 -38374911 - L2 LINE L2 -99 3214 3096 279 308 83 45 chr2 214882461 214882617 -38373966 + MIR SINE MIR 66 227 -35 353 22 22 0 chr2 214882635 214882681 -38373902 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 4783 146 23 45 chr2 214882681 214882830 -38373753 - L1MA8 LINE L1 -6 6285 6134 2228 66 4 11 chr2 214882830 214883104 -38373479 - AluY SINE Alu -11 300 29 4783 146 23 45 chr2 214883104 214883458 -38373125 - L1MA8 LINE L1 -157 6134 5774 2428 100 0 0 chr2 214883458 214883768 -38372815 - AluSg SINE Alu 0 310 1 4783 146 23 45 chr2 214883768 214884226 -38372357 - L1MA8 LINE L1 -517 5774 5344 22 35 0 0 chr2 214886710 214886739 -38369844 + AT_rich Low_complexity Low_complexity 1 29 0 396 356 116 21 chr2 214887527 214887856 -38368727 + L2 LINE L2 2329 2688 -626 711 252 124 9 chr2 214887911 214888129 -38368454 + MIR SINE MIR 2 244 -18 443 289 154 13 chr2 214888185 214888334 -38368249 - MER5A DNA MER1_type -1 188 19 252 0 0 0 chr2 214888391 214888419 -38368164 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 21 0 0 0 chr2 214888960 214888981 -38367602 + AT_rich Low_complexity Low_complexity 1 21 0 736 254 68 10 chr2 214889019 214889224 -38367359 + L3b LINE CR1 1282 1498 -85 284 252 126 9 chr2 214889666 214889777 -38366806 - L2 LINE L2 -1 3312 3189 248 289 26 0 chr2 214890276 214890352 -38366231 - MER81 DNA DNA -36 78 1 1989 121 46 0 chr2 214892643 214892923 -38363660 + AluSx SINE Alu 1 293 -19 485 114 0 23 chr2 214892938 214893026 -38363557 + (GGAA)n Simple_repeat Simple_repeat 4 89 0 547 189 0 23 chr2 214894066 214894198 -38362385 - L1MC4 LINE L1 0 8042 7914 282 116 0 0 chr2 214894198 214894241 -38362342 + (TC)n Simple_repeat Simple_repeat 1 43 0 2227 107 3 3 chr2 214895646 214895955 -38360628 - AluSc SINE Alu 0 309 1 223 340 75 48 chr2 214897699 214897887 -38358696 + L2 LINE L2 2472 2664 -650 228 231 108 100 chr2 214898081 214898211 -38358372 + L2 LINE L2 2924 3054 -218 198 0 0 0 chr2 214898273 214898295 -38358288 + (TAG)n Simple_repeat Simple_repeat 1 22 0 854 191 7 0 chr2 214898297 214898438 -38358145 - FRAM SINE Alu -34 142 1 789 247 30 43 chr2 214900145 214900376 -38356207 - MIR SINE MIR -15 247 20 419 305 40 28 chr2 214900382 214900559 -38356024 + MIR SINE MIR 65 243 -19 28 0 0 0 chr2 214901419 214901447 -38355136 + AT_rich Low_complexity Low_complexity 1 28 0 292 289 192 0 chr2 214901828 214901932 -38354651 - L2 LINE L2 0 3313 3190 2017 129 0 11 chr2 214902455 214902795 -38353788 + AluSx SINE Alu 1 337 0 2224 99 0 0 chr2 214902805 214903097 -38353486 + AluSx SINE Alu 1 292 -20 23 0 0 0 chr2 214903097 214903120 -38353463 + AT_rich Low_complexity Low_complexity 1 23 0 344 250 8 0 chr2 214903927 214904055 -38352528 + (CA)n Simple_repeat Simple_repeat 1 129 0 2299 104 0 3 chr2 214904246 214904555 -38352028 + AluSx SINE Alu 1 308 -4 1996 143 7 3 chr2 214904572 214904873 -38351710 + AluSg SINE Alu 1 302 -8 352 309 16 16 chr2 214905152 214905278 -38351305 + GA-rich Low_complexity Low_complexity 1 126 0 365 272 78 50 chr2 214905523 214905703 -38350880 - MIR SINE MIR -14 248 64 26 30 0 0 chr2 214905711 214905744 -38350839 + AT_rich Low_complexity Low_complexity 1 33 0 1147 162 96 1 chr2 214905938 214906230 -38350353 + MER33 DNA MER1_type 1 305 -19 1436 122 24 35 chr2 214908345 214908599 -38347984 - THE1B LTR MaLR -6 358 108 989 122 6 47 chr2 214908608 214908780 -38347803 - THE1B LTR MaLR -198 166 2 906 117 0 0 chr2 214908780 214908900 -38347683 - AluSq/x SINE Alu -193 120 1 216 287 225 31 chr2 214909346 214909475 -38347108 - L2 LINE L2 0 3313 3160 2163 113 0 19 chr2 214910614 214910925 -38345658 + AluSg1 SINE Alu 1 305 -4 21 0 0 0 chr2 214911409 214911430 -38345153 + AT_rich Low_complexity Low_complexity 1 21 0 333 247 205 0 chr2 214912180 214912319 -38344264 + MER5A DNA MER1_type 4 176 -13 550 335 169 26 chr2 214912334 214912826 -38343757 + L3 LINE CR1 918 1479 -98 420 92 0 0 chr2 214912882 214912947 -38343636 - L1 LINE L1 -1548 4598 4534 5209 174 29 7 chr2 214912987 214914627 -38341956 + L1MA5 LINE L1 4624 6300 0 476 173 48 39 chr2 214914643 214914747 -38341836 - MER7A DNA MER2_type -243 103 1 352 182 0 65 chr2 214914776 214914853 -38341730 + L2 LINE L2 3202 3273 -40 339 269 9 46 chr2 214914908 214915016 -38341567 - L2 LINE L2 0 3313 3210 186 43 0 0 chr2 214916698 214916721 -38339862 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 297 0 0 0 chr2 214916941 214916974 -38339609 + (TG)n Simple_repeat Simple_repeat 2 34 0 338 340 0 0 chr2 214917364 214917514 -38339069 + Tigger8 DNA MER2_type 103 252 -414 283 300 136 0 chr2 214917572 214917712 -38338871 + Tigger8 DNA MER2_type 450 608 -58 1356 207 81 55 chr2 214917805 214918304 -38338279 - MER39 LTR ERV1 -9 698 1 2231 70 3 7 chr2 214918635 214918967 -38337616 + AluSx SINE Alu 1 331 0 359 311 96 41 chr2 214918969 214919262 -38337321 + Charlie8 DNA MER1_type 113 421 -1996 413 362 47 45 chr2 214919592 214920037 -38336546 - L3 LINE CR1 -567 1010 565 207 0 0 0 chr2 214920058 214920081 -38336502 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 304 309 82 27 chr2 214920604 214920917 -38335666 - LTR16B LTR ERVL -2 448 71 243 88 0 0 chr2 214922533 214922567 -38334016 + (T)n Simple_repeat Simple_repeat 1 34 0 186 329 0 27 chr2 214926259 214926332 -38330251 + L2 LINE L2 3201 3271 -1 312 365 18 41 chr2 214926344 214926514 -38330069 - MIR3 SINE MIR -18 190 25 272 281 0 0 chr2 214926669 214926733 -38329850 - MIR SINE MIR -111 151 88 1275 111 0 32 chr2 214926767 214926957 -38329626 - AluJ SINE Alu 0 312 129 501 108 0 0 chr2 214926977 214927051 -38329532 + tRNA-Glu-GAG tRNA tRNA 2 75 0 330 180 0 0 chr2 214927056 214927117 -38329466 - LTR2B LTR ERV1 0 490 430 737 49 0 20 chr2 214927119 214927221 -38329362 + L1PA4 LINE L1 6056 6155 0 681 198 8 0 chr2 214927243 214927364 -38329219 - AluJ SINE Alu -180 122 1 520 268 67 0 chr2 214927826 214927990 -38328593 + MER45A DNA AcHobo 4 178 0 2291 124 8 21 chr2 214928417 214928797 -38327786 - THE1C LTR MaLR 0 375 1 767 207 5 64 chr2 214929086 214929274 -38327309 - FRAM SINE Alu 0 176 1 2149 142 0 0 chr2 214929355 214929666 -38326917 + AluSx SINE Alu 1 311 -1 190 238 63 48 chr2 214930699 214930762 -38325821 + MER5B DNA MER1_type 15 78 -100 290 366 24 16 chr2 214931001 214931124 -38325459 - L3 LINE CR1 -1427 150 27 201 314 0 43 chr2 214931725 214931795 -38324788 + MER5A DNA MER1_type 53 119 -70 484 293 27 16 chr2 214932758 214933014 -38323569 - L1M4 LINE L1 -636 5548 5290 244 274 43 17 chr2 214933141 214933258 -38323325 - L1M4 LINE L1 -1031 5115 4996 276 293 0 0 chr2 214933414 214933489 -38323094 + MIR SINE MIR 15 89 -173 212 253 86 26 chr2 214935482 214935586 -38320997 - MIR SINE MIR -65 143 36 321 274 0 0 chr2 214936182 214936255 -38320328 + MIR SINE MIR 186 258 -4 1849 117 35 42 chr2 214936399 214936711 -38319872 - AluSx SINE Alu 0 312 3 2284 101 7 0 chr2 214937666 214937964 -38318619 + AluSq SINE Alu 1 300 -13 1061 121 0 79 chr2 214937964 214938154 -38318429 + AluSg/x SINE Alu 132 306 -3 424 174 10 10 chr2 214938771 214938869 -38317714 + (TCCA)n Simple_repeat Simple_repeat 4 101 0 291 317 166 14 chr2 214939222 214939367 -38317216 - MIR3 SINE MIR -41 167 1 1177 295 24 64 chr2 214939880 214940348 -38316235 + L3b LINE CR1 1111 1559 -24 408 338 42 5 chr2 214940721 214940934 -38315649 + L1ME4a LINE L1 5699 5919 -202 2145 113 3 0 chr2 214941097 214941388 -38315195 + AluSx SINE Alu 1 292 -20 3736 165 84 26 chr2 214944455 214945237 -38311346 - L1MB8 LINE L1 -12 6166 5339 1610 194 7 0 chr2 214945445 214945724 -38310859 + AluJo SINE Alu 1 281 -31 1945 112 28 21 chr2 214946994 214947279 -38309304 - AluSg SINE Alu -23 287 1 250 316 29 7 chr2 214947337 214947476 -38309107 - L1ME LINE L1 -212 5909 5768 22 80 0 0 chr2 214947696 214947746 -38308837 + AT_rich Low_complexity Low_complexity 1 50 0 180 111 0 0 chr2 214948071 214948098 -38308485 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 199 338 43 52 chr2 214948103 214948408 -38308175 - L2 LINE L2 -458 2856 2555 553 289 62 19 chr2 214948800 214949008 -38307575 - MIR SINE MIR -2 260 44 193 295 16 16 chr2 214949750 214949811 -38306772 - MIR SINE MIR -1 261 201 263 285 115 48 chr2 214950001 214950166 -38306417 - MER5B DNA MER1_type 0 178 3 2288 111 0 0 chr2 214950510 214950817 -38305766 - AluSq SINE Alu -6 307 1 2450 89 0 0 chr2 214951372 214951676 -38304907 - AluSc SINE Alu -5 304 1 2074 139 0 3 chr2 214952534 214952829 -38303754 + AluSc SINE Alu 1 294 -15 279 89 115 0 chr2 214952849 214953006 -38303577 + (TA)n Simple_repeat Simple_repeat 2 176 0 42 20 0 0 chr2 214953009 214953058 -38303525 + AT_rich Low_complexity Low_complexity 1 49 0 412 68 107 0 chr2 214953060 214953373 -38303210 + (TA)n Simple_repeat Simple_repeat 1 346 0 312 97 78 19 chr2 214953398 214953552 -38303031 + (TA)n Simple_repeat Simple_repeat 2 164 0 298 117 53 35 chr2 214953540 214953711 -38302872 + (TATAA)n Simple_repeat Simple_repeat 5 178 0 * 434 78 98 3 chr2 214953718 214954017 -38302566 + (TA)n Simple_repeat Simple_repeat 1 327 0 5925 210 68 36 chr2 214954693 214955830 -38300753 - L1MC4a LINE L1 -15 7793 6537 525 16 0 0 chr2 214955830 214955892 -38300691 + (TAGA)n Simple_repeat Simple_repeat 4 65 0 5925 210 68 36 chr2 214955892 214956618 -38299965 - L1MC4a LINE L1 -1271 6537 5836 229 345 97 9 chr2 214957685 214957798 -38298785 + L2 LINE L2 3187 3309 -4 227 286 113 45 chr2 214958592 214958725 -38297858 + Charlie8 DNA MER1_type 7 148 -2269 296 232 0 14 chr2 214959079 214959148 -38297435 - tRNA-Ile-ATT tRNA tRNA -3 74 7 2037 89 71 0 chr2 214962095 214962390 -38294193 - AluSq SINE Alu 0 314 1 23 0 0 0 chr2 214964559 214964582 -38292001 + AT_rich Low_complexity Low_complexity 1 23 0 21 57 0 0 chr2 214966714 214966749 -38289834 + AT_rich Low_complexity Low_complexity 1 35 0 186 43 0 0 chr2 214966865 214966888 -38289695 + (TGAA)n Simple_repeat Simple_repeat 2 24 0 649 263 112 79 chr2 214967168 214967278 -38289305 + L2 LINE L2 1489 1594 -1720 2587 158 10 18 chr2 214967278 214967772 -38288811 + L1MB4 LINE L1 5688 6177 -3 649 263 112 79 chr2 214967772 214968307 -38288276 + L2 LINE L2 1594 2155 -1159 563 300 147 42 chr2 214968761 214969168 -38287415 + L2 LINE L2 2858 3307 -6 266 140 20 20 chr2 214969854 214969904 -38286679 + MIR SINE MIR 102 151 -57 2304 99 0 7 chr2 214970763 214971066 -38285517 + AluSq SINE Alu 1 301 -12 2316 96 0 3 chr2 214971734 214972037 -38284546 + AluSq SINE Alu 2 303 -10 2250 108 0 0 chr2 214972054 214972401 -38284182 - AluSx SINE Alu 0 347 1 501 313 36 10 chr2 214972633 214972828 -38283755 + MIR3 SINE MIR 6 205 -3 1996 159 0 3 chr2 214973113 214973415 -38283168 + AluSx SINE Alu 9 309 -3 210 191 0 0 chr2 214973535 214973577 -38283006 + GA-rich Low_complexity Low_complexity 3 44 0 397 279 46 6 chr2 214976046 214976169 -38280414 - MER63 DNA MER1_type -7 1053 707 811 173 16 58 chr2 214976307 214976498 -38280085 + MER5A DNA MER1_type 7 189 0 382 245 190 30 chr2 214976751 214976885 -38279698 - L1ME4a LINE L1 -12 6109 5998 1231 203 67 27 chr2 214976885 214977215 -38279368 - MER2 DNA MER2_type 0 344 2 382 245 190 30 chr2 214977215 214977411 -38279172 - L1ME4a LINE L1 -123 5998 5726 686 157 9 17 chr2 214977443 214977558 -38279025 - FLAM_C SINE Alu -17 116 3 1285 313 104 44 chr2 214977892 214977931 -38278652 + L3 LINE CR1 385 420 -1157 1077 162 18 61 chr2 214977931 214978159 -38278424 + MER20 DNA MER1_type 1 218 -1 1285 313 104 44 chr2 214978159 214978934 -38277649 + L3 LINE CR1 420 1301 -276 312 257 0 30 chr2 214978958 214979059 -38277524 + (TTTA)n Simple_repeat Simple_repeat 3 100 0 196 329 196 0 chr2 214979085 214979243 -38277340 + L3 LINE CR1 1345 1533 -44 32 43 0 0 chr2 214979288 214979334 -38277249 + AT_rich Low_complexity Low_complexity 1 46 0 2459 100 0 0 chr2 214979406 214979715 -38276868 - AluSc SINE Alu 0 309 1 27 0 0 0 chr2 214982475 214982502 -38274081 + AT_rich Low_complexity Low_complexity 1 27 0 1334 138 78 0 chr2 214982797 214983015 -38273568 - MER46A DNA MER2_type 0 236 2 971 236 19 0 chr2 214983761 214983973 -38272610 + MER20 DNA MER1_type 1 216 -3 198 360 0 11 chr2 214984020 214984109 -38272474 - MER5B DNA MER1_type -89 89 2 185 276 207 0 chr2 214984197 214984284 -38272299 + MIR SINE MIR 106 210 -52 508 243 139 35 chr2 214985574 214985776 -38270807 + MIR SINE MIR 40 262 0 433 318 77 34 chr2 214985795 214986028 -38270555 + MIR SINE MIR 20 262 0 252 274 14 14 chr2 214986138 214986211 -38270372 + L2 LINE L2 3241 3313 0 207 0 0 0 chr2 214989664 214989687 -38266896 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 5066 52 0 0 chr2 214989687 214990305 -38266278 - L1PA6 LINE L1 -11 6143 5526 190 224 20 20 chr2 214990625 214990674 -38265909 - L3 LINE CR1 -855 722 674 246 273 186 37 chr2 214991070 214991231 -38265352 - L2 LINE L2 -1 3312 3128 23 0 0 0 chr2 214991678 214991701 -38264882 + AT_rich Low_complexity Low_complexity 1 23 0 2359 107 11 35 chr2 214991826 214992199 -38264384 + THE1B LTR MaLR 1 364 0 251 184 20 0 chr2 214992498 214992547 -38264036 + L2 LINE L2 3221 3270 -2 620 235 117 11 chr2 214993048 214993227 -38263356 - MIR SINE MIR -30 232 35 2049 125 37 0 chr2 214993608 214993905 -38262678 + AluSc SINE Alu 1 308 -1 785 212 36 40 chr2 214994381 214994663 -38261920 - MLT1D LTR MaLR -1 504 191 479 317 200 19 chr2 214994684 214995197 -38261386 - L2 LINE L2 -21 3292 2665 217 261 0 0 chr2 214996167 214996213 -38260370 + MIR SINE MIR 209 254 -8 2945 91 27 52 chr2 214996362 214996846 -38259737 + L1PA13 LINE L1 5692 6163 0 22 35 0 0 chr2 214998729 214998758 -38257825 + AT_rich Low_complexity Low_complexity 1 29 0 195 152 0 0 chr2 214998989 214999035 -38257548 + (TAA)n Simple_repeat Simple_repeat 3 48 0 2172 290 113 36 chr2 214999629 215000684 -38255899 + L1MC4a LINE L1 5254 6467 -1341 1366 152 71 113 chr2 215000684 215000848 -38255735 + MLT1A1 LTR MaLR 1 170 -195 1673 173 20 7 chr2 215000848 215001148 -38255435 + AluJb SINE Alu 1 304 -8 1366 152 71 113 chr2 215001148 215001364 -38255219 + MLT1A1 LTR MaLR 170 365 0 2172 290 113 36 chr2 215001364 215001853 -38254730 + L1MC4a LINE L1 6467 6917 -891 463 268 54 19 chr2 215001995 215002270 -38254313 + L1MC5 LINE L1 6972 7249 -741 1116 248 42 50 chr2 215002463 215002867 -38253716 - MLT1C LTR MaLR 0 467 67 804 197 26 0 chr2 215002914 215003066 -38253517 + MER8 DNA MER2_type 84 239 0 313 253 95 83 chr2 215003120 215003142 -38253441 + L1MC5 LINE L1 7315 7335 -626 771 210 70 30 chr2 215003142 215003342 -38253241 - MER3 DNA MER1_type -1 208 1 313 253 95 83 chr2 215003342 215003821 -38252762 + L1MC5 LINE L1 7335 7827 -134 2168 129 3 0 chr2 215003821 215004123 -38252460 - AluSx SINE Alu -9 303 1 313 253 95 83 chr2 215004123 215004212 -38252371 + L1MC5 LINE L1 7827 7913 -48 2258 96 0 0 chr2 215004222 215004515 -38252068 - AluY SINE Alu -18 293 1 185 371 26 60 chr2 215004553 215004704 -38251879 + MIR SINE MIR 1 146 -116 1150 230 124 31 chr2 215004908 215005386 -38251197 + L2 LINE L2 2542 3052 -261 331 236 28 0 chr2 215005410 215005516 -38251067 - Charlie5 DNA MER1_type -2492 120 12 21 0 0 0 chr2 215005516 215005537 -38251046 + AT_rich Low_complexity Low_complexity 1 21 0 2331 99 3 0 chr2 215005997 215006300 -38250283 + AluSq SINE Alu 1 304 -9 1794 228 143 31 chr2 215006303 215007014 -38249569 - L1ME2 LINE L1 -7 6157 5367 27 29 0 0 chr2 215007618 215007652 -38248931 + AT_rich Low_complexity Low_complexity 1 34 0 677 227 6 18 chr2 215007655 215007818 -38248765 + L1PA16 LINE L1 5996 6156 -10 248 233 55 55 chr2 215007839 215007985 -38248598 - L1ME4a LINE L1 -49 6072 5927 234 196 0 0 chr2 215008077 215008128 -38248455 - L1ME4a LINE L1 -357 5764 5714 592 242 7 78 chr2 215008385 215008654 -38247929 - HAL1b LINE L1 -432 916 667 958 206 42 94 chr2 215008654 215009014 -38247569 - MLT1A1 LTR MaLR 0 365 25 357 250 8 16 chr2 215009038 215009162 -38247421 - HAL1b LINE L1 -685 663 541 21 36 0 0 chr2 215009320 215009348 -38247235 + AT_rich Low_complexity Low_complexity 1 28 0 861 233 35 0 chr2 215010187 215010389 -38246194 + MER3 DNA MER1_type 1 209 0 227 188 14 29 chr2 215011654 215011723 -38244860 + T-rich Low_complexity Low_complexity 4 71 0 2074 130 0 13 chr2 215015037 215015345 -38241238 - AluSg SINE Alu -4 306 3 235 224 60 0 chr2 215015349 215015416 -38241167 + MER103 DNA DNA 49 119 -47 237 128 26 0 chr2 215015838 215015877 -38240706 + MIR SINE MIR 222 261 -1 475 348 76 50 chr2 215016080 215016500 -38240083 - L2 LINE L2 -1 3271 2841 237 205 51 26 chr2 215016537 215016615 -38239968 + MER117 DNA MER1_type 12 91 -106 1555 153 0 71 chr2 215016624 215016731 -38239852 + AluJo SINE Alu 24 137 -175 1976 148 3 3 chr2 215016731 215017029 -38239554 - AluSx SINE Alu -14 298 1 1555 153 0 71 chr2 215017029 215017216 -38239367 + AluJo SINE Alu 137 297 -15 220 374 91 0 chr2 215017321 215017508 -38239075 - L2 LINE L2 -556 2758 2555 266 366 35 17 chr2 215017583 215017755 -38238828 - L2 LINE L2 -1342 1972 1798 518 267 73 36 chr2 215017822 215018009 -38238574 - MIR3 SINE MIR -13 195 5 2624 123 57 5 chr2 215018039 215018446 -38238137 - MSTA LTR MaLR 0 428 1 261 288 25 12 chr2 215018611 215018691 -38237892 - L2 LINE L2 0 3313 3233 281 214 174 10 chr2 215020010 215020108 -38236475 + L2 LINE L2 3200 3313 0 2168 111 7 3 chr2 215020126 215020423 -38236160 - AluSq SINE Alu -15 298 1 442 332 106 20 chr2 215020429 215020730 -38235853 - L3 LINE CR1 -9 1568 1242 224 220 34 17 chr2 215020737 215020796 -38235787 - L2 LINE L2 -5 3267 3208 1129 299 144 45 chr2 215020838 215021631 -38234952 - L3 LINE CR1 -339 1238 525 2484 73 3 0 chr2 215021631 215021934 -38234649 + AluSp SINE Alu 1 304 -9 1129 299 144 45 chr2 215021934 215021975 -38234608 - L3 LINE CR1 -1052 525 489 2359 83 0 3 chr2 215021975 215022277 -38234306 - AluSq SINE Alu -12 301 1 1129 299 144 45 chr2 215022277 215022318 -38234265 - L3 LINE CR1 -1088 489 275 203 272 48 29 chr2 215022757 215022860 -38233723 + MIR SINE MIR 87 191 -71 2482 83 0 6 chr2 215023210 215023522 -38233061 - AluSx SINE Alu -2 310 1 1836 97 47 0 chr2 215024408 215024435 -38232148 - L1MA2 LINE L1 0 6304 6280 207 69 0 0 chr2 215024435 215024464 -38232119 + (TA)n Simple_repeat Simple_repeat 1 29 0 1836 97 47 0 chr2 215024464 215024714 -38231869 - L1MA2 LINE L1 -24 6280 6014 474 261 106 14 chr2 215026248 215026390 -38230193 - MIR SINE MIR -84 178 24 433 179 88 130 chr2 215026412 215026674 -38229909 - MER112 DNA MER1_type -4 252 2 180 125 0 0 chr2 215026743 215026775 -38229808 + (TTCA)n Simple_repeat Simple_repeat 4 35 0 809 247 21 11 chr2 215027823 215028013 -38228570 + MIR SINE MIR 6 197 -65 180 259 37 0 chr2 215028091 215028145 -38228438 + MIR SINE MIR 185 240 -22 1807 164 124 126 chr2 215028417 215029101 -38227482 - L1MD2 LINE L1 -13 6346 5664 1360 260 29 2 chr2 215029098 215029510 -38227073 - L1ME LINE L1 -1948 4132 3710 * 222 241 42 24 chr2 215029565 215029731 -38226852 + (TTAA)n Simple_repeat Simple_repeat 1 169 0 747 248 41 65 chr2 215029739 215030155 -38226428 - L1ME LINE L1 -2499 3581 3176 487 283 71 54 chr2 215030266 215030544 -38226039 - L1ME LINE L1 -4613 1648 1355 1404 164 0 8 chr2 215030544 215030782 -38225801 + MER46A DNA MER2_type 1 236 0 487 283 71 54 chr2 215030782 215031023 -38225560 - L1ME LINE L1 -4906 1355 1120 730 289 119 70 chr2 215031045 215031584 -38224999 - L1ME LINE L1 -4982 1088 561 411 56 0 0 chr2 215033129 215033183 -38223400 + (ATG)n Simple_repeat Simple_repeat 2 55 0 389 310 94 35 chr2 215033313 215033516 -38223067 + MIR SINE MIR 12 226 -36 486 354 107 31 chr2 215033792 215034083 -38222500 - L2 LINE L2 -76 3196 2884 985 180 0 6 chr2 215034394 215034561 -38222022 - MER5A DNA MER1_type -1 188 23 204 237 0 0 chr2 215034773 215034811 -38221772 + L2 LINE L2 3262 3299 -14 189 0 0 0 chr2 215036185 215036206 -38220377 + (A)n Simple_repeat Simple_repeat 1 21 0 494 278 115 13 chr2 215037954 215038188 -38218395 - MIR SINE MIR -3 259 2 605 201 194 0 chr2 215038770 215038914 -38217669 - MER5A DNA MER1_type -7 182 11 2394 97 0 0 chr2 215039449 215039759 -38216824 - AluSq SINE Alu -3 310 1 788 192 163 4 chr2 215040172 215040448 -38216135 - MER33 DNA MER1_type 0 324 5 186 368 44 15 chr2 215040599 215040667 -38215916 - L2 LINE L2 -76 3196 3127 236 267 44 22 chr2 215041275 215041365 -38215218 + L2 LINE L2 2402 2493 -821 239 263 35 0 chr2 215041902 215041959 -38214624 + L2 LINE L2 3255 3313 0 324 342 17 8 chr2 215042803 215042923 -38213660 + MIR3 SINE MIR 88 208 0 2469 92 0 3 chr2 215044095 215044409 -38212174 - AluSq SINE Alu 0 313 1 276 100 0 0 chr2 215045690 215045730 -38210853 + (TGAA)n Simple_repeat Simple_repeat 3 42 0 243 0 0 0 chr2 215046401 215046428 -38210155 + (TG)n Simple_repeat Simple_repeat 2 28 0 302 271 0 42 chr2 215046428 215046524 -38210059 - L1MC4 LINE L1 -1339 6703 6612 27 62 0 0 chr2 215046906 215046954 -38209629 + AT_rich Low_complexity Low_complexity 1 48 0 747 265 120 30 chr2 215047220 215047654 -38208929 - L1ME4a LINE L1 -265 5856 5384 282 29 0 0 chr2 215049363 215049398 -38207185 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 780 318 91 49 chr2 215052322 215052642 -38203941 + L2 LINE L2 2530 2835 -478 2260 107 0 7 chr2 215052642 215052951 -38203632 - AluSx SINE Alu -5 307 1 780 318 91 49 chr2 215052951 215053363 -38203220 + L2 LINE L2 2835 3310 -3 326 264 134 79 chr2 215053409 215053950 -38202633 - L2 LINE L2 -37 3276 2695 625 260 133 5 chr2 215054365 215054561 -38202022 - MIR SINE MIR -21 241 21 210 71 0 0 chr2 215057915 215057943 -38198640 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 365 256 27 148 chr2 215058581 215058804 -38197779 + L2 LINE L2 3025 3220 -52 1950 151 74 50 chr2 215059183 215059601 -38196982 - MSTA LTR MaLR 0 428 1 1647 141 115 7 chr2 215060945 215061249 -38195334 - MER1B DNA MER1_type 0 337 1 748 223 7 0 chr2 215062087 215062226 -38194357 + FRAM SINE Alu 11 150 -26 324 158 0 0 chr2 215062226 215062283 -38194300 + (TA)n Simple_repeat Simple_repeat 1 57 0 233 130 0 0 chr2 215062288 215062334 -38194249 - L1MC4 LINE L1 -1339 6703 6658 7288 32 9 1 chr2 215062857 215064353 -38192230 - L1PA4 LINE L1 0 6155 4655 21 36 0 0 chr2 215065558 215065586 -38190997 + AT_rich Low_complexity Low_complexity 1 28 0 2107 109 7 14 chr2 215066451 215066806 -38189777 - AluSx SINE Alu 0 312 1 520 284 139 9 chr2 215067504 215067731 -38188852 + MIR SINE MIR 3 259 -3 475 265 48 32 chr2 215068659 215068848 -38187735 + MER117 DNA MER1_type 1 192 -5 180 0 0 0 chr2 215070174 215070194 -38186389 + (T)n Simple_repeat Simple_repeat 1 20 0 2062 132 17 0 chr2 215070641 215070763 -38185820 + AluSx SINE Alu 1 119 -193 261 0 0 0 chr2 215070763 215070792 -38185791 + (CA)n Simple_repeat Simple_repeat 2 30 0 2062 132 17 0 chr2 215070792 215070964 -38185619 + AluSx SINE Alu 119 300 -12 2199 128 0 0 chr2 215070966 215071263 -38185320 + AluSx SINE Alu 1 297 -15 487 287 48 37 chr2 215071382 215071570 -38185013 + L2 LINE L2 2869 3058 -214 238 314 0 35 chr2 215073458 215073544 -38183039 + MIR SINE MIR 180 262 0 31 0 0 0 chr2 215075538 215075569 -38181014 + AT_rich Low_complexity Low_complexity 1 31 0 361 188 26 17 chr2 215075722 215075839 -38180744 + CT-rich Low_complexity Low_complexity 3 120 0 4810 19 0 2 chr2 215076242 215076832 -38179751 - L1PA4 LINE L1 -1316 4830 4242 * 7028 36 5 0 chr2 215076823 215078160 -38178423 + L1PA4 LINE L1 4825 6165 0 2372 105 0 0 chr2 215078799 215079104 -38177479 + AluSc SINE Alu 1 305 -4 912 299 57 72 chr2 215079553 215079949 -38176634 - MLT1K LTR MaLR -14 574 187 2637 58 0 0 chr2 215079949 215080260 -38176323 - AluY SINE Alu 0 311 1 912 299 57 72 chr2 215080260 215080422 -38176161 - MLT1K LTR MaLR -401 187 24 1933 168 3 0 chr2 215081037 215081340 -38175243 + AluJb SINE Alu 1 304 -8 580 274 128 20 chr2 215082807 215083011 -38173572 + MIR SINE MIR 23 248 -14 272 232 232 26 chr2 215083607 215083744 -38172839 - MIR SINE MIR -40 168 32 190 374 12 0 chr2 215086425 215086508 -38170075 - L2 LINE L2 0 3272 3189 225 304 123 0 chr2 215086915 215087053 -38169530 - MER112 DNA MER1_type -18 242 88 22 70 0 0 chr2 215087527 215087570 -38169013 + AT_rich Low_complexity Low_complexity 1 43 0 9604 150 20 10 chr2 215087582 215093290 -38163293 - L1PA14 LINE L1 0 7599 1622 484 290 67 21 chr2 215093352 215093680 -38162903 - L1ME4a LINE L1 -70 6051 5709 299 266 40 54 chr2 215094242 215094464 -38162119 - L1ME4a LINE L1 -2205 3941 3723 183 42 0 0 chr2 215094490 215094514 -38162069 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 303 381 32 23 chr2 215094518 215094828 -38161755 - L1ME4a LINE L1 -2470 3676 3364 22 0 0 0 chr2 215094841 215094863 -38161720 + AT_rich Low_complexity Low_complexity 1 22 0 193 118 39 39 chr2 215094863 215094914 -38161669 + T-rich Low_complexity Low_complexity 4 54 0 28 29 0 0 chr2 215095244 215095279 -38161304 + AT_rich Low_complexity Low_complexity 1 35 0 309 293 29 50 chr2 215095294 215095434 -38161149 - L2 LINE L2 0 3313 3177 267 173 0 0 chr2 215095952 215096004 -38160579 + (TA)n Simple_repeat Simple_repeat 1 52 0 1573 98 0 0 chr2 215096004 215096208 -38160375 - AluSg/x SINE Alu -25 284 81 23 0 0 0 chr2 215096427 215096450 -38160133 + AT_rich Low_complexity Low_complexity 1 23 0 283 206 0 27 chr2 215096480 215096553 -38160030 - HAL1b LINE L1 -640 708 638 272 277 18 18 chr2 215096769 215096881 -38159702 - HAL1b LINE L1 -891 457 346 2303 106 0 0 chr2 215101243 215101536 -38155047 - AluSc SINE Alu -16 293 1 21 0 0 0 chr2 215105939 215105960 -38150623 + AT_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr2 215106284 215106320 -38150263 + AT_rich Low_complexity Low_complexity 1 36 0 1041 168 12 0 chr2 215106469 215106642 -38149941 - AluJb SINE Alu -5 307 133 211 313 0 0 chr2 215106766 215106830 -38149753 + A-rich Low_complexity Low_complexity 1 64 0 389 286 175 25 chr2 215106865 215107145 -38149438 - L2 LINE L2 -1 3312 2991 2102 123 0 26 chr2 215107213 215107515 -38149068 - AluSx SINE Alu -18 294 1 190 245 75 0 chr2 215109833 215109886 -38146697 + MIR SINE MIR 156 212 -50 189 0 0 0 chr2 215111219 215111240 -38145343 + (CA)n Simple_repeat Simple_repeat 2 22 0 270 191 15 15 chr2 215111337 215111405 -38145178 + CT-rich Low_complexity Low_complexity 1 68 0 727 246 65 19 chr2 215111589 215111804 -38144779 - MIR SINE MIR 0 262 38 2325 112 3 0 chr2 215114090 215114394 -38142189 - AluSq SINE Alu -8 305 1 232 238 79 69 chr2 215114481 215114582 -38142001 - L2 LINE L2 0 3272 3171 2362 112 3 0 chr2 215114608 215114920 -38141663 + AluSq SINE Alu 1 313 0 369 93 0 0 chr2 215115095 215115149 -38141434 + (TG)n Simple_repeat Simple_repeat 1 54 0 236 379 35 9 chr2 215115820 215115936 -38140647 - L2 LINE L2 -1 3271 3153 424 236 73 27 chr2 215116338 215116448 -38140135 + MIR SINE MIR 31 145 -117 213 175 0 0 chr2 215117178 215117218 -38139365 + (CA)n Simple_repeat Simple_repeat 1 40 0 263 287 28 37 chr2 215117592 215117700 -38138883 - MIR3 SINE MIR -11 197 91 334 254 44 0 chr2 215119541 215119655 -38136928 + L1ME4a LINE L1 5748 5866 -255 199 291 13 13 chr2 215120024 215120103 -38136480 + L2 LINE L2 1846 1924 -1390 677 325 99 50 chr2 215120714 215121278 -38135305 + L2 LINE L2 1936 2527 -787 5315 174 27 29 chr2 215121399 215122710 -38133873 + L1MC1 LINE L1 5023 6333 0 311 247 56 0 chr2 215123508 215123597 -38132986 - L1MC4 LINE L1 -1337 6705 6612 * 415 208 15 0 chr2 215123515 215123645 -38132938 + (TA)n Simple_repeat Simple_repeat 1 132 0 314 240 0 73 chr2 215123613 215123709 -38132874 + L1MC4 LINE L1 6615 6703 -1339 * 243 125 0 54 chr2 215123679 215123723 -38132860 + LTR66 LTR ERVL 394 436 -174 * 243 0 0 0 chr2 215123723 215123750 -38132833 + (CA)n Simple_repeat Simple_repeat 2 28 0 243 125 0 54 chr2 215123750 215123761 -38132822 + LTR66 LTR ERVL 436 446 -164 1946 128 0 17 chr2 215125141 215125460 -38131123 - AluSx SINE Alu 0 314 1 1267 191 72 0 chr2 215125490 215125767 -38130816 + L1MC3 LINE L1 7485 7781 -4 213 39 0 0 chr2 215125767 215125793 -38130790 + (GAA)n Simple_repeat Simple_repeat 2 27 0 24 53 0 0 chr2 215127237 215127275 -38129308 + AT_rich Low_complexity Low_complexity 1 38 0 1819 162 6 68 chr2 215127365 215127716 -38128867 - MER2 DNA MER2_type 0 345 17 195 42 0 0 chr2 215128001 215128025 -38128558 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 529 328 30 0 chr2 215130257 215130458 -38126125 + MIR SINE MIR 19 225 -37 201 293 112 9 chr2 215130512 215130628 -38125955 + L2 LINE L2 1511 1638 -1676 221 376 18 18 chr2 215131683 215131792 -38124791 + L2 LINE L2 3186 3294 -19 1542 193 7 4 chr2 215131918 215132192 -38124391 - AluJb SINE Alu -37 275 1 2524 83 0 0 chr2 215132343 215132645 -38123938 - AluSx SINE Alu -10 302 1 917 214 26 30 chr2 215132668 215132902 -38123681 - MIR SINE MIR -16 246 14 226 267 69 30 chr2 215132940 215133041 -38123542 + L2 LINE L2 3142 3246 -67 181 308 279 6 chr2 215136026 215136198 -38120385 - MIR SINE MIR -16 246 28 536 301 41 24 chr2 215136696 215136927 -38119656 - MIR SINE MIR -10 252 21 823 306 135 30 chr2 215138475 215139375 -38117208 - L2 LINE L2 0 3313 2305 433 252 30 8 chr2 215139785 215139916 -38116667 + L1MC4 LINE L1 7778 7911 -131 2610 54 0 25 chr2 215140051 215140368 -38116215 - AluY SINE Alu -2 309 1 1019 274 62 6 chr2 215140492 215140813 -38115770 - LTR16C LTR ERVL -16 475 137 777 253 125 67 chr2 215141642 215142028 -38114555 - L1MC/D LINE L1 -469 5652 5255 189 173 39 39 chr2 215144842 215144894 -38111689 - L2 LINE L2 0 3272 3221 266 383 39 62 chr2 215145050 215145209 -38111374 - L2 LINE L2 -495 2819 2658 1934 124 7 7 chr2 215145209 215145492 -38111091 + AluSq SINE Alu 1 283 -30 266 383 39 62 chr2 215145492 215145602 -38110981 - L2 LINE L2 -656 2658 2547 2847 88 16 11 chr2 215145602 215145975 -38110608 - THE1C LTR MaLR 0 375 1 266 383 39 62 chr2 215145975 215146169 -38110414 - L2 LINE L2 -767 2547 2366 213 121 0 0 chr2 215147602 215147635 -38108948 + (GAAA)n Simple_repeat Simple_repeat 3 35 0 279 79 0 0 chr2 215147831 215147869 -38108714 + (CA)n Simple_repeat Simple_repeat 2 39 0 207 148 33 16 chr2 215147898 215147959 -38108624 + (TA)n Simple_repeat Simple_repeat 1 62 0 6571 179 47 8 chr2 215147966 215150068 -38106515 - L1MC1 LINE L1 -18 6315 4127 195 273 101 71 chr2 215151627 215151726 -38104857 + L2 LINE L2 3169 3270 -2 1033 95 0 0 chr2 215153832 215153969 -38102614 + L1MA3 LINE L1 5645 5781 -524 324 88 75 0 chr2 215153980 215154060 -38102523 + (TAGA)n Simple_repeat Simple_repeat 4 89 0 202 206 0 0 chr2 215154082 215154116 -38102467 + (TG)n Simple_repeat Simple_repeat 1 34 0 471 118 0 0 chr2 215154116 215154201 -38102382 + (TA)n Simple_repeat Simple_repeat 2 86 0 236 36 43 0 chr2 215154201 215154237 -38102346 - L1M2 LINE L1 -463 5834 5795 1451 160 38 4 chr2 215154238 215154501 -38102082 + L1MA3 LINE L1 6034 6305 0 216 0 0 0 chr2 215156124 215156148 -38100435 + (TG)n Simple_repeat Simple_repeat 1 24 0 561 246 8 0 chr2 215156256 215156386 -38100197 - MIR SINE MIR -6 256 126 1154 161 105 56 chr2 215156876 215157142 -38099441 + MER33 DNA MER1_type 1 286 -2299 2208 95 3 0 chr2 215157142 215157456 -38099127 + AluSq SINE Alu 1 315 0 1154 161 105 56 chr2 215157456 215157493 -38099090 + MER33 DNA MER1_type 286 320 -4 217 180 20 0 chr2 215159341 215159391 -38097192 + (TA)n Simple_repeat Simple_repeat 1 51 0 227 238 175 0 chr2 215160703 215160783 -38095800 + L2 LINE L2 3205 3298 -15 442 222 39 4 chr2 215161375 215161496 -38095087 + L1ME1 LINE L1 6054 6334 0 1668 191 0 11 chr2 215161752 215162035 -38094548 + AluJb SINE Alu 1 280 -32 216 0 0 0 chr2 215162035 215162059 -38094524 + (CAAT)n Simple_repeat Simple_repeat 4 27 0 1526 281 39 36 chr2 215162913 215163433 -38093150 - MLT1K LTR MaLR -60 528 8 354 283 21 35 chr2 215164173 215164318 -38092265 - MIR SINE MIR 0 262 120 425 271 121 24 chr2 215164824 215164990 -38091593 - MIR SINE MIR -70 192 11 347 288 136 8 chr2 215165178 215165296 -38091287 - L2 LINE L2 -3 3269 3137 245 295 0 0 chr2 215166721 215166782 -38089801 - MIR SINE MIR -64 144 84 276 270 40 27 chr2 215166887 215166961 -38089622 - MIR3 SINE MIR -39 169 95 342 269 21 0 chr2 215167389 215167482 -38089101 - Charlie8 DNA MER1_type -2273 144 50 22 0 0 0 chr2 215167676 215167698 -38088885 + AT_rich Low_complexity Low_complexity 1 22 0 254 239 0 104 chr2 215167778 215167892 -38088691 - MIR SINE MIR -55 153 92 4202 165 39 1 chr2 215169784 215170474 -38086109 - L1PA16 LINE L1 -2 6164 5449 5132 244 25 16 chr2 215170476 215171891 -38084692 + L1P LINE L1 1738 3165 -2981 3472 152 10 0 chr2 215172152 215172672 -38083911 - LTR45 LTR ERV1 0 525 1 277 269 28 28 chr2 215173046 215173154 -38083429 - L2 LINE L2 -917 2397 2290 6726 97 14 2 chr2 215173258 215174499 -38082084 - L1PA10 LINE L1 -16 6467 5214 18259 184 18 28 chr2 215174530 215176945 -38079638 - L1PA10 LINE L1 -1901 4560 2123 2241 116 54 25 chr2 215176945 215177299 -38079284 - THE1B LTR MaLR 0 364 1 18259 184 18 28 chr2 215177299 215178212 -38078371 - L1PA10 LINE L1 -4338 2123 1203 200 59 29 0 chr2 215178212 215178246 -38078337 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 18259 184 18 28 chr2 215178246 215179313 -38077270 - L1PA10 LINE L1 -5258 1203 3 352 263 76 53 chr2 215179601 215179772 -38076811 + MER5A DNA MER1_type 1 175 -14 207 310 90 45 chr2 215179635 215179790 -38076793 - MER5A DNA MER1_type -22 167 6 * 718 254 38 24 chr2 215180130 215180343 -38076240 + MIR SINE MIR 4 219 -43 459 35 0 0 chr2 215180570 215180627 -38075956 + (CA)n Simple_repeat Simple_repeat 2 58 0 212 274 0 161 chr2 215183347 215183471 -38073112 - L2 LINE L2 -16 3297 3194 326 310 18 9 chr2 215183705 215183818 -38072765 - L2 LINE L2 -8 3264 3151 1955 129 39 0 chr2 215184909 215185188 -38071395 - AluSx SINE Alu -22 290 1 25 31 0 0 chr2 215185188 215185220 -38071363 + AT_rich Low_complexity Low_complexity 1 32 0 2106 126 3 16 chr2 215187168 215187477 -38069106 + AluSx SINE Alu 1 305 -7 968 271 147 3 chr2 215187821 215188161 -38068422 - MLT1J LTR MaLR -37 474 86 189 0 0 0 chr2 215189635 215189656 -38066927 + (GA)n Simple_repeat Simple_repeat 1 21 0 * 210 71 0 0 chr2 215189655 215189683 -38066900 + (TG)n Simple_repeat Simple_repeat 2 29 0 1250 101 120 24 chr2 215192939 215193147 -38063436 + MER30 DNA MER1_type 3 230 0 1179 292 59 5 chr2 215193268 215193675 -38062908 - LTR16A LTR ERVL -1 449 21 198 341 79 14 chr2 215193875 215194089 -38062494 + L2 LINE L2 2246 2473 -841 360 206 62 21 chr2 215194302 215194399 -38062184 + MER58A DNA MER1_type 33 133 0 191 376 87 7 chr2 215194499 215194648 -38061935 + MIR SINE MIR 29 189 -73 4557 176 35 15 chr2 215194659 215195023 -38061560 + MER6 DNA MER2_type 1 356 -509 2078 147 0 0 chr2 215195023 215195335 -38061248 + AluSx SINE Alu 1 312 0 4557 176 35 15 chr2 215195335 215195818 -38060765 + MER6 DNA MER2_type 356 865 0 898 227 0 11 chr2 215195832 215196017 -38060566 - MER63A DNA MER1_type -24 186 4 384 71 0 0 chr2 215196064 215196120 -38060463 + (CA)n Simple_repeat Simple_repeat 2 57 0 1733 98 0 0 chr2 215196238 215196453 -38060130 - AluSg/x SINE Alu -14 298 84 567 207 12 28 chr2 215196998 215197196 -38059387 - L1MB8 LINE L1 -52 6131 5933 * 1673 163 33 30 chr2 215197192 215197262 -38059321 + L1MA6 LINE L1 5731 5799 -501 2552 88 8 8 chr2 215197262 215197613 -38058970 - THE1A LTR MaLR -2 353 3 1673 163 33 30 chr2 215197613 215197874 -38058709 + L1MA6 LINE L1 5799 6063 -237 1928 132 35 3 chr2 215197874 215198161 -38058422 - AluJb SINE Alu -16 296 1 297 325 56 12 chr2 215198231 215198391 -38058192 + LTR67 LTR ERVL 372 538 -19 1891 117 0 0 chr2 215199273 215199520 -38057063 + AluSx SINE Alu 1 247 -65 807 126 0 0 chr2 215199521 215199632 -38056951 + AluSp/q SINE Alu 190 300 -13 192 184 20 41 chr2 215199692 215199741 -38056842 - L2 LINE L2 -18 3295 3248 1772 159 11 0 chr2 215200037 215200308 -38056275 + AluJo SINE Alu 9 282 -30 229 276 0 11 chr2 215200312 215200399 -38056184 + (TA)n Simple_repeat Simple_repeat 1 86 0 185 293 50 137 chr2 215200496 215200854 -38055729 - L2 LINE L2 -27 3245 2919 322 277 194 19 chr2 215201165 215201371 -38055212 - MIR SINE MIR -7 255 14 788 232 142 22 chr2 215203119 215203442 -38053141 - MER113 DNA MER1_type? -47 474 113 2021 148 6 46 chr2 215203868 215204219 -38052364 - MER1B DNA MER1_type 0 337 1 273 279 63 27 chr2 215204297 215204408 -38052175 + MER112 DNA MER1_type 4 118 -142 378 342 9 0 chr2 215204510 215204667 -38051916 - MIR3 SINE MIR -48 160 1 3413 130 25 4 chr2 215205032 215205548 -38051035 + MER1A DNA MER1_type 1 527 0 1837 242 15 15 chr2 215205664 215206131 -38050452 - MLT1C LTR MaLR 0 467 1 459 243 52 71 chr2 215206413 215206671 -38049912 + MLT1J LTR MaLR 110 436 -179 343 254 87 0 chr2 215206686 215206812 -38049771 - MIR SINE MIR -3 259 123 21 0 0 0 chr2 215206884 215206905 -38049678 + AT_rich Low_complexity Low_complexity 1 21 0 199 227 0 0 chr2 215206968 215207012 -38049571 + MIR SINE MIR 160 203 -59 2182 218 94 19 chr2 215207128 215207710 -38048873 + MLT1E2 LTR MaLR 1 626 0 236 197 84 42 chr2 215207928 215207999 -38048584 + MER91C DNA MER1_type 45 118 -22 213 39 0 0 chr2 215208716 215208742 -38047841 + (A)n Simple_repeat Simple_repeat 1 26 0 855 223 47 132 chr2 215209592 215210018 -38046565 + MLT1B LTR MaLR 1 390 0 297 0 0 0 chr2 215210194 215210227 -38046356 + (CA)n Simple_repeat Simple_repeat 1 33 0 466 290 40 17 chr2 215210491 215210667 -38045916 + MIR SINE MIR 48 227 -35 27 0 0 0 chr2 215211223 215211250 -38045333 + AT_rich Low_complexity Low_complexity 1 27 0 493 286 12 18 chr2 215212040 215212208 -38044375 - MER5A DNA MER1_type -21 168 2 646 286 21 5 chr2 215212269 215212461 -38044122 + MIR SINE MIR 48 242 -20 540 165 64 0 chr2 215212723 215212832 -38043751 + ERVL-C1 LTR ERVL 5630 5745 -19 815 205 43 134 chr2 215212832 215213183 -38043400 + MLT2C1 LTR ERVL 1 319 -78 285 244 13 26 chr2 215214273 215214351 -38042232 - MER5A DNA MER1_type -69 120 44 2301 105 7 0 chr2 215214351 215214656 -38041927 - AluSp SINE Alu -6 307 1 983 126 0 0 chr2 215214661 215214788 -38041795 - AluSq/x SINE Alu -186 127 1 339 164 60 0 chr2 215215025 215215092 -38041491 + MER5A DNA MER1_type 28 98 -91 288 53 0 0 chr2 215215613 215215651 -38040932 + (CA)n Simple_repeat Simple_repeat 2 39 0 742 212 81 55 chr2 215217257 215217437 -38039146 + MIR SINE MIR 20 209 -53 2103 98 16 51 chr2 215217437 215217752 -38038831 + AluSg SINE Alu 1 304 -6 742 212 81 55 chr2 215217752 215217807 -38038776 + MIR SINE MIR 209 261 -1 280 320 55 8 chr2 215217819 215217947 -38038636 + L2 LINE L2 3139 3272 0 302 207 18 27 chr2 215218518 215218629 -38037954 + GA-rich Low_complexity Low_complexity 2 111 0 284 186 17 17 chr2 215218665 215218724 -38037859 - MER103 DNA DNA -105 61 3 316 278 22 0 chr2 215219210 215219300 -38037283 + MIR3 SINE MIR 109 200 -8 2088 113 0 7 chr2 215219848 215220160 -38036423 - AluSc SINE Alu 0 310 1 204 302 19 0 chr2 215220454 215220507 -38036076 + MIR SINE MIR 87 140 -68 327 258 90 0 chr2 215220590 215220679 -38035904 + MIR3 SINE MIR 89 185 -23 2108 187 0 13 chr2 215220734 215221129 -38035454 - MLT1B LTR MaLR 0 390 1 600 261 67 42 chr2 215221279 215221517 -38035066 + MIR SINE MIR 18 261 -1 282 277 85 0 chr2 215225499 215225593 -38030990 + MIR SINE MIR 147 248 -14 1225 172 64 37 chr2 215225865 215226263 -38030320 + MLT1D LTR MaLR 1 504 -1 1088 245 12 8 chr2 215226634 215226891 -38029692 - MIR SINE MIR -3 259 2 189 288 50 25 chr2 215226980 215227060 -38029523 - MIR SINE MIR -11 251 170 303 270 37 74 chr2 215227148 215227288 -38029295 + MIR SINE MIR 19 154 -108 2329 153 89 0 chr2 215227288 215227681 -38028902 + MSTC LTR MaLR 1 428 0 303 270 37 74 chr2 215227681 215227703 -38028880 + MIR SINE MIR 154 175 -87 590 260 53 35 chr2 215227961 215228130 -38028453 + MER5B DNA MER1_type 1 172 -6 478 234 9 27 chr2 215228481 215228592 -38027991 - MIR3 SINE MIR -10 198 90 230 232 89 0 chr2 215229659 215229715 -38026868 + MIR SINE MIR 156 216 -46 429 254 46 69 chr2 215230722 215230895 -38025688 + MIR SINE MIR 24 192 -70 481 251 161 80 chr2 215231296 215231707 -38024876 + MLT1K LTR MaLR 144 587 -1 579 252 113 35 chr2 215232425 215232655 -38023928 + MIR SINE MIR 15 262 0 207 248 73 101 chr2 215234708 215234817 -38021766 - L3 LINE CR1 -13 1564 1459 300 311 114 29 chr2 215235536 215235851 -38020732 - MLT1I LTR MaLR 0 409 68 2295 96 0 13 chr2 215236552 215236854 -38019729 - AluSq SINE Alu -13 300 3 366 23 0 0 chr2 215236978 215237021 -38019562 + (TG)n Simple_repeat Simple_repeat 2 44 0 225 0 0 0 chr2 215237136 215237161 -38019422 + (CCA)n Simple_repeat Simple_repeat 2 26 0 2891 116 31 5 chr2 215237463 215237910 -38018673 - L1PA15 LINE L1 0 6165 5707 2167 113 3 7 chr2 215237914 215238216 -38018367 - AluSp SINE Alu -12 301 1 295 291 101 51 chr2 215238634 215238792 -38017791 - MIR3 SINE MIR -3 205 40 8630 133 45 34 chr2 215238866 215239753 -38016830 - L1MA4A LINE L1 -1 6302 5426 2674 61 0 0 chr2 215239753 215240064 -38016519 - AluY SINE Alu 0 311 1 8630 133 45 34 chr2 215240064 215241501 -38015082 - L1MA4A LINE L1 -877 5426 3943 2095 121 52 25 chr2 215241501 215241866 -38014717 - THE1C LTR MaLR 0 375 1 8630 133 45 34 chr2 215241866 215242197 -38014386 - L1MA4A LINE L1 -2360 3943 3617 1429 137 9 9 chr2 215242297 215242516 -38014067 - AluSg SINE Alu -91 219 1 2183 131 0 3 chr2 215242536 215242848 -38013735 - AluSx SINE Alu -1 311 1 380 242 8 0 chr2 215243039 215243171 -38013412 + (TG)n Simple_repeat Simple_repeat 1 133 0 23 0 0 0 chr2 215243978 215244001 -38012582 + AT_rich Low_complexity Low_complexity 1 23 0 2237 99 0 0 chr2 215244001 215244293 -38012290 - AluSx SINE Alu -20 292 1 2119 132 0 10 chr2 215244304 215244614 -38011969 - AluSx SINE Alu -5 307 1 278 298 192 0 chr2 215245137 215245241 -38011342 + L2 LINE L2 3190 3313 0 21 36 0 0 chr2 215245622 215245650 -38010933 + AT_rich Low_complexity Low_complexity 1 28 0 432 299 40 28 chr2 215246510 215246687 -38009896 - MIR SINE MIR -19 243 65 812 242 30 43 chr2 215246693 215246924 -38009659 + MIR SINE MIR 20 247 -15 854 191 7 0 chr2 215248628 215248769 -38007814 + FRAM SINE Alu 1 142 -34 252 0 0 0 chr2 215248771 215248799 -38007784 + (CTA)n Simple_repeat Simple_repeat 1 28 0 228 231 108 100 chr2 215248861 215248991 -38007592 - L2 LINE L2 -218 3054 2924 223 340 75 48 chr2 215249185 215249373 -38007210 - L2 LINE L2 -650 2664 2472 2108 104 13 3 chr2 215251117 215251416 -38005167 + AluSc SINE Alu 1 302 -7 282 116 0 0 chr2 215252810 215252853 -38003730 + (GA)n Simple_repeat Simple_repeat 1 43 0 547 189 0 23 chr2 215252853 215252985 -38003598 + L1MC4 LINE L1 7914 8042 0 485 114 0 23 chr2 215254025 215254113 -38002470 + (TTCC)n Simple_repeat Simple_repeat 4 89 0 1989 121 46 0 chr2 215254124 215254404 -38002179 - AluSx SINE Alu -19 293 1 248 289 26 0 chr2 215256695 215256771 -37999812 + MER81 DNA DNA 1 78 -36 298 243 126 9 chr2 215257270 215257381 -37999202 + L2 LINE L2 3189 3312 -1 736 254 68 10 chr2 215257823 215258028 -37998555 - L3b LINE CR1 -85 1498 1282 21 0 0 0 chr2 215258066 215258087 -37998496 + AT_rich Low_complexity Low_complexity 1 21 0 252 0 0 0 chr2 215258628 215258656 -37997927 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 443 289 154 13 chr2 215258713 215258862 -37997721 + MER5A DNA MER1_type 19 188 -1 711 252 124 9 chr2 215258918 215259136 -37997447 - MIR SINE MIR -18 244 2 396 356 116 21 chr2 215259191 215259520 -37997063 - L2 LINE L2 -626 2688 2329 375 229 0 0 chr2 215260399 215260543 -37996040 + C-rich Low_complexity Low_complexity 1 144 0 263 204 10 87 chr2 215260710 215260813 -37995770 + L1MEc LINE L1 1874 1968 -4428 1670 180 67 6 chr2 215260813 215261158 -37995425 - MER47A DNA MER2_type 0 366 1 329 203 203 0 chr2 215261218 215261371 -37995212 + L1MEc LINE L1 2133 2316 -4080 814 193 0 0 chr2 215261382 215261522 -37995061 + FRAM SINE Alu 1 140 -36 2244 251 33 13 chr2 215261526 215262347 -37994236 + L1MEc LINE L1 2322 3158 -3057 1768 183 0 7 chr2 215262347 215262648 -37993935 + AluJb SINE Alu 1 299 -13 435 159 0 57 chr2 215262656 215262744 -37993839 - Tigger7 DNA MER2_type 0 2487 2405 1251 241 7 4 chr2 215262767 215263037 -37993546 - Tigger7 DNA MER2_type -458 275 5 1104 272 91 15 chr2 215263042 215263637 -37992946 + L1MEc LINE L1 3162 3801 -2414 900 141 32 0 chr2 215263643 215263799 -37992784 + MLT1B LTR MaLR 187 347 -43 420 258 41 5 chr2 215263814 215263976 -37992607 + L1M4 LINE L1 3739 3899 -2247 1843 140 32 7 chr2 215264295 215264600 -37991983 - AluSq SINE Alu 0 312 1 276 302 191 8 chr2 215265311 215265437 -37991146 - L2 LINE L2 -3 3269 3121 646 185 8 8 chr2 215265532 215265651 -37990932 + FLAM_A SINE Alu 1 119 -14 24 67 0 0 chr2 215265651 215265696 -37990887 + AT_rich Low_complexity Low_complexity 1 45 0 22 56 0 0 chr2 215265717 215265753 -37990830 + AT_rich Low_complexity Low_complexity 1 36 0 2148 100 0 14 chr2 215265779 215266070 -37990513 + AluSq SINE Alu 26 312 -1 1897 145 7 10 chr2 215266090 215266393 -37990190 + AluSg SINE Alu 1 302 -8 352 309 16 16 chr2 215266672 215266798 -37989785 + GA-rich Low_complexity Low_complexity 1 126 0 365 272 78 50 chr2 215267043 215267223 -37989360 - MIR SINE MIR -14 248 64 26 30 0 0 chr2 215267231 215267264 -37989319 + AT_rich Low_complexity Low_complexity 1 33 0 1147 162 96 1 chr2 215267458 215267750 -37988833 + MER33 DNA MER1_type 1 305 -19 222 248 73 101 chr2 215318804 215318913 -37937670 - L3 LINE CR1 -13 1564 1459 450 302 118 32 chr2 215319632 215319947 -37936636 - MLT1I LTR MaLR 0 409 68 2181 96 0 13 chr2 215320648 215320950 -37935633 - AluSq SINE Alu -13 300 3 420 20 0 0 chr2 215321074 215321123 -37935460 + (TG)n Simple_repeat Simple_repeat 2 50 0 225 0 0 0 chr2 215321238 215321263 -37935320 + (CCA)n Simple_repeat Simple_repeat 2 26 0 2955 119 31 5 chr2 215321564 215322011 -37934572 - L1PA15 LINE L1 0 6165 5707 2056 113 3 7 chr2 215322015 215322317 -37934266 - AluSp SINE Alu -12 301 1 292 291 101 51 chr2 215322730 215322888 -37933695 - MIR3 SINE MIR -3 205 40 3768 105 25 19 chr2 215322962 215323856 -37932727 - L1MA4A LINE L1 -1 6302 5352 1179 186 0 0 chr2 215323859 215324074 -37932509 - AluY SINE Alu 0 311 97 316 244 13 26 chr2 215324243 215324321 -37932262 - MER5A DNA MER1_type -69 120 44 2173 105 7 0 chr2 215324321 215324626 -37931957 - AluSp SINE Alu -6 307 1 926 126 0 0 chr2 215324631 215324758 -37931825 - AluSq/x SINE Alu -186 127 1 184 300 0 0 chr2 215324758 215324808 -37931775 - MER5A DNA MER1_type -137 52 3 370 205 51 0 chr2 215324995 215325073 -37931510 + MER5A DNA MER1_type 28 109 -80 306 50 0 0 chr2 215325583 215325623 -37930960 + (CA)n Simple_repeat Simple_repeat 2 41 0 840 212 81 55 chr2 215327229 215327409 -37929174 + MIR SINE MIR 20 209 -53 1950 109 16 45 chr2 215327409 215327722 -37928861 + AluSg SINE Alu 1 304 -6 840 212 81 55 chr2 215327722 215327777 -37928806 + MIR SINE MIR 209 261 -1 319 288 68 23 chr2 215327785 215327917 -37928666 + L2 LINE L2 3176 3313 0 208 227 23 11 chr2 215328488 215328576 -37928007 + GA-rich Low_complexity Low_complexity 2 90 0 280 186 17 17 chr2 215328627 215328686 -37927897 - MER103 DNA DNA -105 61 3 2027 103 0 7 chr2 215329397 215329709 -37926874 - AluSc SINE Alu 0 310 1 222 302 19 0 chr2 215330003 215330056 -37926527 + MIR SINE MIR 87 140 -68 384 247 90 0 chr2 215330139 215330228 -37926355 + MIR3 SINE MIR 89 185 -23 2116 187 0 13 chr2 215330283 215330678 -37925905 - MLT1B LTR MaLR 0 390 1 709 261 67 42 chr2 215330828 215331066 -37925517 + MIR SINE MIR 18 261 -1 298 277 85 0 chr2 215335049 215335143 -37921440 + MIR SINE MIR 147 248 -14 1230 172 64 37 chr2 215335415 215335813 -37920770 + MLT1D LTR MaLR 1 504 -1 1103 249 12 8 chr2 215336184 215336441 -37920142 - MIR SINE MIR -3 259 2 198 301 48 24 chr2 215336530 215336613 -37919970 - MIR SINE MIR -11 251 167 320 270 37 74 chr2 215336698 215336838 -37919745 + MIR SINE MIR 19 154 -108 2398 150 89 0 chr2 215336838 215337231 -37919352 + MSTC LTR MaLR 1 428 0 320 270 37 74 chr2 215337231 215337253 -37919330 + MIR SINE MIR 154 175 -87 605 260 53 35 chr2 215337511 215337680 -37918903 + MER5B DNA MER1_type 1 172 -6 490 234 9 27 chr2 215338031 215338142 -37918441 - MIR3 SINE MIR -10 198 90 221 231 96 0 chr2 215339209 215339261 -37917322 + MIR SINE MIR 156 212 -50 445 254 46 69 chr2 215340081 215340254 -37916329 + MIR SINE MIR 24 192 -70 614 251 161 80 chr2 215340655 215341066 -37915517 + MLT1K LTR MaLR 144 587 -1 585 252 113 35 chr2 215341779 215342009 -37914574 + MIR SINE MIR 15 262 0 2220 66 0 11 chr2 215343583 215343870 -37912713 - AluY SINE Alu -27 284 1 12485 163 33 27 chr2 215343870 215345304 -37911279 - L1M LINE L1 -786 5360 3931 2150 121 52 25 chr2 215345304 215345669 -37910914 - THE1C LTR MaLR 0 375 1 12485 163 33 27 chr2 215345669 215346779 -37909804 - L1M LINE L1 -2215 3931 2829 25 0 0 0 chr2 215347202 215347227 -37909356 + AT_rich Low_complexity Low_complexity 1 25 0 234 300 0 14 chr2 215347399 215347469 -37909114 + MIR SINE MIR 22 90 -118 21 0 0 0 chr2 215348928 215348949 -37907634 + AT_rich Low_complexity Low_complexity 1 21 0 215 338 13 0 chr2 215349449 215349526 -37907057 - L2 LINE L2 -1 3271 3194 332 237 237 29 chr2 215349744 215349917 -37906666 + MER112 DNA MER1_type 48 256 -4 235 239 177 35 chr2 215349934 215350047 -37906536 - MIR SINE MIR -60 148 20 276 288 65 43 chr2 215350055 215350239 -37906344 + L2 LINE L2 3114 3301 -12 221 363 108 10 chr2 215350333 215350435 -37906148 - MIR SINE MIR -61 147 36 2194 110 3 0 chr2 215350547 215350855 -37905728 - AluSx SINE Alu -3 309 1 216 86 0 0 chr2 215352358 215352393 -37904190 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 207 283 0 60 chr2 215352480 215352646 -37903937 + T-rich Low_complexity Low_complexity 5 160 0 24 53 0 0 chr2 215352914 215352952 -37903631 + AT_rich Low_complexity Low_complexity 1 38 0 226 311 49 33 chr2 215353878 215354000 -37902583 - MIR3 SINE MIR -7 201 78 631 207 168 0 chr2 215354392 215354571 -37902012 - MER3 DNA MER1_type 0 209 1 501 292 16 32 chr2 215355790 215355975 -37900608 + MER5A DNA MER1_type 1 182 -7 265 152 45 0 chr2 215357403 215357469 -37899114 + GA-rich Low_complexity Low_complexity 4 72 0 207 69 0 0 chr2 215359200 215359229 -37897354 + (CAG)n Simple_repeat Simple_repeat 3 31 0 183 80 0 0 chr2 215359471 215359496 -37897087 + (TTA)n Simple_repeat Simple_repeat 1 25 0 309 26 0 0 chr2 215360105 215360143 -37896440 + (TG)n Simple_repeat Simple_repeat 2 39 0 189 0 0 0 chr2 215362768 215362789 -37893794 + (TCC)n Simple_repeat Simple_repeat 3 23 0 229 0 83 0 chr2 215365388 215365424 -37891159 + A-rich Low_complexity Low_complexity 2 40 0 598 215 103 56 chr2 215365778 215365973 -37890610 + MIR SINE MIR 35 238 -24 209 340 10 10 chr2 215366208 215366308 -37890275 + CT-rich Low_complexity Low_complexity 1 100 0 1881 122 25 4 chr2 215367003 215367129 -37889454 + AluSx SINE Alu 1 123 -186 459 0 0 0 chr2 215367129 215367180 -37889403 + (CA)n Simple_repeat Simple_repeat 2 52 0 1881 122 25 4 chr2 215367180 215367356 -37889227 + AluSx SINE Alu 123 309 0 500 303 67 12 chr2 215369406 215369571 -37887012 - MIR3 SINE MIR -16 192 19 204 274 0 48 chr2 215370121 215370183 -37886400 - MIR3 SINE MIR -47 161 103 22 35 0 0 chr2 215373483 215373512 -37883071 + AT_rich Low_complexity Low_complexity 1 29 0 297 0 0 0 chr2 215373862 215373895 -37882688 + (TG)n Simple_repeat Simple_repeat 2 34 0 632 275 0 19 chr2 215374864 215375024 -37881559 - MIR SINE MIR -30 232 76 213 326 42 32 chr2 215375647 215375742 -37880841 + MIR SINE MIR 31 126 -82 238 276 0 0 chr2 215376484 215376542 -37880041 + CT-rich Low_complexity Low_complexity 1 58 0 2098 92 0 11 chr2 215377824 215378107 -37878476 + AluSx SINE Alu 22 301 -11 255 301 41 0 chr2 215378559 215378632 -37877951 + MIR SINE MIR 104 179 -83 591 288 81 34 chr2 215379871 215380107 -37876476 - MIR SINE MIR -10 252 6 337 277 84 61 chr2 215380133 215380346 -37876237 - L2 LINE L2 -159 3113 2896 213 182 0 0 chr2 215381940 215381973 -37874610 + polypurine Low_complexity Low_complexity 3 35 0 519 228 239 11 chr2 215382145 215382325 -37874258 - MIR SINE MIR 0 262 42 201 135 54 0 chr2 215382433 215382470 -37874113 + T-rich Low_complexity Low_complexity 3 41 0 194 264 55 100 chr2 215384478 215384588 -37871995 - MIR SINE MIR -102 160 56 273 256 0 51 chr2 215385531 215385609 -37870974 - MIR SINE MIR 0 262 189 550 319 42 11 chr2 215385924 215386115 -37870468 - MIR SINE MIR 0 262 66 706 275 72 19 chr2 215386804 215387011 -37869572 + MIR SINE MIR 31 248 -14 990 304 61 13 chr2 215387739 215388114 -37868469 - L2 LINE L2 0 3313 2921 195 368 0 11 chr2 215389868 215389955 -37866628 - MIR SINE MIR -13 249 164 186 43 0 0 chr2 215389959 215389982 -37866601 + (ATG)n Simple_repeat Simple_repeat 3 25 0 516 276 89 59 chr2 215390024 215390531 -37866052 - L1ME4a LINE L1 -62 6059 5538 209 250 0 0 chr2 215390584 215390628 -37865955 + MIR SINE MIR 111 154 -108 693 236 60 88 chr2 215390633 215390883 -37865700 - MIR SINE MIR 0 262 20 591 297 45 20 chr2 215392208 215392410 -37864173 - MIR SINE MIR 0 262 56 2327 101 0 0 chr2 215395210 215395506 -37861077 + AluSq SINE Alu 2 297 -16 246 62 0 0 chr2 215396801 215396833 -37859750 + (T)n Simple_repeat Simple_repeat 1 32 0 231 36 0 0 chr2 215398692 215398720 -37857863 + (TC)n Simple_repeat Simple_repeat 1 28 0 * 366 23 0 0 chr2 215398719 215398762 -37857821 + (CA)n Simple_repeat Simple_repeat 1 43 0 218 352 11 0 chr2 215399334 215399422 -37857161 + L3b LINE CR1 1241 1329 -254 487 250 0 14 chr2 215399549 215399678 -37856905 + MIR SINE MIR 2 123 -85 389 312 26 2 chr2 215399931 215400072 -37856511 + MIR SINE MIR 15 141 -67 333 263 18 44 chr2 215400740 215400854 -37855729 + MIR3 SINE MIR 94 204 -4 197 211 0 58 chr2 215401005 215401057 -37855526 - L2 LINE L2 -1 3312 3264 2253 122 0 13 chr2 215401204 215401516 -37855067 - AluSx SINE Alu -4 308 1 276 250 147 17 chr2 215402754 215402870 -37853713 - L2 LINE L2 0 3272 3142 252 0 0 0 chr2 215406492 215406520 -37850063 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 189 0 0 0 chr2 215407108 215407129 -37849454 + (CTCTG)n Simple_repeat Simple_repeat 3 23 0 185 283 50 0 chr2 215407331 215407391 -37849192 - L3 LINE CR1 -900 677 615 213 94 0 0 chr2 215410720 215410752 -37845831 + (TA)n Simple_repeat Simple_repeat 1 32 0 196 82 82 0 chr2 215412005 215412066 -37844517 + (TA)n Simple_repeat Simple_repeat 1 66 0 2306 114 0 13 chr2 215412609 215412925 -37843658 + AluSx SINE Alu 1 312 0 454 293 20 30 chr2 215413913 215414100 -37842483 - MIR3 SINE MIR -24 184 3 297 75 0 0 chr2 215414930 215414970 -37841613 + (CAAAA)n Simple_repeat Simple_repeat 1 40 0 291 197 49 16 chr2 215415836 215415897 -37840686 + MIR SINE MIR 110 172 -90 180 0 0 0 chr2 215416232 215416252 -37840331 + (T)n Simple_repeat Simple_repeat 1 20 0 194 205 0 0 chr2 215417362 215417401 -37839182 - L2 LINE L2 0 3313 3275 792 274 115 8 chr2 215417407 215417641 -37838942 - MIR SINE MIR -2 260 2 480 316 35 87 chr2 215417641 215417987 -37838596 - L2 LINE L2 -30 3242 2916 194 276 58 11 chr2 215418043 215418130 -37838453 - L2 LINE L2 -644 2670 2580 572 301 62 16 chr2 215418342 215418535 -37838048 - MIR SINE MIR -47 215 14 521 342 46 57 chr2 215418796 215419185 -37837398 - L2 LINE L2 0 3272 2888 969 274 36 4 chr2 215419366 215419614 -37836969 - MIR SINE MIR -3 259 4 702 248 61 41 chr2 215420220 215420290 -37836293 - MIR SINE MIR 0 262 195 2149 104 14 0 chr2 215420290 215420593 -37835990 - AluSx SINE Alu 0 307 1 702 248 61 41 chr2 215420593 215420767 -37835816 - MIR SINE MIR -67 195 12 948 262 29 20 chr2 215423786 215424030 -37832553 + MIR SINE MIR 4 249 -13 334 282 114 0 chr2 215424033 215424164 -37832419 + MER112 DNA MER1_type 82 227 -33 266 266 50 14 chr2 215424193 215424338 -37832245 - MIR SINE MIR -48 160 10 186 226 0 57 chr2 215425361 215425414 -37831169 + L2 LINE L2 3262 3311 -2 289 227 54 124 chr2 215425531 215425716 -37830867 + Charlie8 DNA MER1_type 67 238 -2179 1752 223 40 16 chr2 215430227 215430653 -37825930 + MER63B DNA MER1_type 1 436 0 227 164 16 0 chr2 215431315 215431376 -37825207 + (TG)n Simple_repeat Simple_repeat 1 62 0 183 204 0 0 chr2 215432542 215432586 -37823997 + T-rich Low_complexity Low_complexity 2 45 0 547 220 105 68 chr2 215433014 215433205 -37823378 - MER3 DNA MER1_type -11 198 1 404 317 115 48 chr2 215435665 215436021 -37820562 + L3b LINE CR1 1116 1495 -88 515 290 19 0 chr2 215436354 215436509 -37820074 - MIR SINE MIR 0 262 105 233 257 28 17 chr2 215436591 215436663 -37819920 + MIR SINE MIR 99 153 -55 499 243 60 62 chr2 215438260 215438515 -37818068 + MIR SINE MIR 4 261 -1 188 289 0 0 chr2 215441000 215441045 -37815538 - MIR SINE MIR -111 151 107 364 330 108 38 chr2 215441336 215441521 -37815062 + L2 LINE L2 3075 3272 0 249 33 0 0 chr2 215441899 215441929 -37814654 + (CA)n Simple_repeat Simple_repeat 2 31 0 21 0 0 0 chr2 215445994 215446015 -37810568 + AT_rich Low_complexity Low_complexity 1 21 0 366 61 0 0 chr2 215446047 215446096 -37810487 + (CA)n Simple_repeat Simple_repeat 2 50 0 1263 198 5 0 chr2 215448301 215448523 -37808060 - MER58A DNA MER1_type -1 223 1 271 246 20 184 chr2 215448523 215448816 -37807767 + MIR SINE MIR 16 260 -2 436 242 121 16 chr2 215449317 215449441 -37807142 + MER91A DNA MER1_type 50 186 -10 258 156 0 0 chr2 215449544 215449589 -37806994 + (TCCA)n Simple_repeat Simple_repeat 3 47 0 214 175 0 0 chr2 215451988 215452028 -37804555 + CT-rich Low_complexity Low_complexity 1 40 0 189 147 0 0 chr2 215452353 215452387 -37804196 + (TG)n Simple_repeat Simple_repeat 1 34 0 503 251 130 12 chr2 215452448 215452664 -37803919 + MIR SINE MIR 9 246 -16 201 244 0 0 chr2 215454076 215454117 -37802466 + GA-rich Low_complexity Low_complexity 2 42 0 195 42 0 0 chr2 215455692 215455716 -37800867 + (TGAA)n Simple_repeat Simple_repeat 4 27 0 549 261 67 71 chr2 215459186 215459535 -37797048 - L1MC4a LINE L1 -219 5951 5585 189 0 0 0 chr2 215460551 215460572 -37796011 + (CA)n Simple_repeat Simple_repeat 2 22 0 203 330 99 40 chr2 215462101 215462374 -37794209 - L3b LINE CR1 -120 1463 1175 230 246 58 0 chr2 215463678 215463781 -37792802 - MIR SINE MIR -64 144 33 345 24 0 0 chr2 215464220 215464263 -37792320 + (TG)n Simple_repeat Simple_repeat 1 85 0 345 24 0 0 chr2 215464263 215464305 -37792278 + (TG)n Simple_repeat Simple_repeat 2 43 0 399 299 23 61 chr2 215469773 215469950 -37786633 + MIR SINE MIR 15 184 -66 1630 144 71 91 chr2 215470011 215470406 -37786177 - MLT1B LTR MaLR -3 387 1 2461 25 0 0 chr2 215470651 215470959 -37785624 - AluY SINE Alu 0 308 1 1170 230 21 4 chr2 215470980 215471215 -37785368 - MIR SINE MIR -16 246 8 270 0 0 0 chr2 215471911 215471941 -37784642 + (TTA)n Simple_repeat Simple_repeat 3 32 0 186 133 0 0 chr2 215472505 215472535 -37784048 + (CATA)n Simple_repeat Simple_repeat 2 31 0 330 216 0 0 chr2 215472943 215473017 -37783566 + (CA)n Simple_repeat Simple_repeat 2 75 0 180 0 0 0 chr2 215474699 215474719 -37781864 + (T)n Simple_repeat Simple_repeat 1 20 0 530 192 0 104 chr2 215474759 215474823 -37781760 - MER81 DNA DNA -1 113 44 2449 220 88 62 chr2 215474823 215475628 -37780955 - LTR1B LTR ERV1 0 826 1 530 192 0 104 chr2 215475628 215475645 -37780938 - MER81 DNA DNA -70 44 27 1700 182 10 55 chr2 215475645 215476030 -37780553 - MLT1A2 LTR MaLR -3 371 4 530 192 0 104 chr2 215476030 215476072 -37780511 - MER81 DNA DNA -87 27 2 929 211 5 21 chr2 215476349 215476539 -37780044 + MER5A DNA MER1_type 3 189 0 666 213 14 14 chr2 215476555 215476696 -37779887 + MLT1A2 LTR MaLR 13 153 -221 426 53 0 0 chr2 215478184 215478241 -37778342 + (TG)n Simple_repeat Simple_repeat 1 57 0 434 265 80 12 chr2 215479102 215479264 -37777319 + MIR3 SINE MIR 22 194 -14 249 318 134 43 chr2 215479554 215479853 -37776730 - L2 LINE L2 0 3272 2947 249 155 119 83 chr2 215479885 215479969 -37776614 + L2 LINE L2 3186 3272 0 364 256 158 18 chr2 215480231 215480269 -37776314 + MER53 DNA DNA 3 34 -155 3315 169 31 5 chr2 215480269 215480854 -37775729 + L1MB4 LINE L1 5575 6174 -6 364 256 158 18 chr2 215480854 215480979 -37775604 + MER53 DNA DNA 34 189 0 1189 112 0 0 chr2 215483403 215483572 -37773011 - AluSg/x SINE Alu -7 305 137 315 128 0 0 chr2 215484264 215484311 -37772272 + L1MB7 LINE L1 6130 6176 -8 295 308 34 0 chr2 215486163 215486280 -37770303 + L1MC4a LINE L1 5792 5912 -1896 606 253 93 0 chr2 215486295 215486445 -37770138 - MER45A DNA AcHobo -14 164 1 23 0 0 0 chr2 215486621 215486644 -37769939 + AT_rich Low_complexity Low_complexity 1 23 0 2355 129 78 39 chr2 215487149 215487561 -37769022 - MSTA LTR MaLR 0 428 1 601 311 131 0 chr2 215487586 215487808 -37768775 - MIR SINE MIR 0 262 12 2133 88 0 7 chr2 215489693 215489966 -37766617 - AluSq SINE Alu -32 281 11 415 228 71 24 chr2 215490008 215490135 -37766448 - MER5A DNA MER1_type -1 188 56 22 35 0 0 chr2 215490394 215490423 -37766160 + AT_rich Low_complexity Low_complexity 1 29 0 535 208 188 0 chr2 215491090 215491239 -37765344 + MIR SINE MIR 86 262 0 347 208 42 42 chr2 215493102 215493174 -37763409 + LTR67 LTR ERVL 104 175 -382 550 333 52 9 chr2 215493221 215493431 -37763152 + LTR67 LTR ERVL 331 549 -8 305 257 90 56 chr2 215493567 215493746 -37762837 - L2 LINE L2 -16 3297 3124 * 798 340 102 15 chr2 215493721 215494250 -37762333 - L2 LINE L2 -653 2661 2087 466 192 20 10 chr2 215494399 215494498 -37762085 - MER102b DNA MER1_type -49 292 193 253 241 24 24 chr2 215494503 215494586 -37761997 + LTR33A LTR ERVL 434 516 -7 381 282 0 0 chr2 215494999 215495077 -37761506 - LTR67 LTR ERVL -380 177 100 654 113 0 0 chr2 215495250 215495374 -37761209 + (TA)n Simple_repeat Simple_repeat 2 125 0 2320 69 3 33 chr2 215495374 215495679 -37760904 - AluY SINE Alu -15 296 1 204 268 49 0 chr2 215496191 215496232 -37760351 + L2 LINE L2 3249 3291 -22 188 35 35 0 chr2 215496537 215496566 -37760017 + (TC)n Simple_repeat Simple_repeat 2 31 0 234 62 0 0 chr2 215496566 215496598 -37759985 + (CA)n Simple_repeat Simple_repeat 1 32 0 1140 269 43 89 chr2 215496615 215496702 -37759881 + L1MC4a LINE L1 5520 5609 -2199 2023 147 0 0 chr2 215496702 215496988 -37759595 + AluSx SINE Alu 1 286 -26 1140 269 43 89 chr2 215496988 215497507 -37759076 + L1MC4a LINE L1 5609 6098 -1710 610 284 12 0 chr2 215498767 215498929 -37757654 - MIR SINE MIR -5 257 94 520 214 7 84 chr2 215499499 215499653 -37756930 + L1MB5 LINE L1 4915 5056 -1090 1941 144 4 0 chr2 215499655 215499932 -37756651 + AluSx SINE Alu 1 278 -34 272 117 0 33 chr2 215499932 215499992 -37756591 + (GAAA)n Simple_repeat Simple_repeat 1 58 0 4524 162 57 22 chr2 215499992 215500106 -37756477 + L1MB5 LINE L1 5042 5151 -1023 2269 104 3 0 chr2 215500106 215500404 -37756179 + AluSx SINE Alu 1 299 -13 4524 162 57 22 chr2 215500404 215501384 -37755199 + L1MB5 LINE L1 5151 6174 0 865 149 0 0 chr2 215501392 215501513 -37755070 + AluJ SINE Alu 1 121 -191 540 181 15 15 chr2 215501513 215501646 -37754937 + GA-rich Low_complexity Low_complexity 3 135 0 909 226 0 0 chr2 215501646 215501814 -37754769 + AluJ SINE Alu 131 298 -14 567 257 114 64 chr2 215501878 215502008 -37754575 - MLT1H LTR MaLR -153 396 274 2835 115 0 6 chr2 215502008 215502374 -37754209 + THE1B LTR MaLR 1 364 0 567 257 114 64 chr2 215502374 215502620 -37753963 - MLT1H LTR MaLR -275 274 1 906 241 75 28 chr2 215502945 215503157 -37753426 - MLT1J2 LTR MaLR -228 222 1 2037 131 7 0 chr2 215505107 215505427 -37751156 + AluSx SINE Alu 1 312 0 2087 138 0 3 chr2 215506461 215506759 -37749824 + AluSx SINE Alu 1 297 -15 22 0 0 0 chr2 215506872 215506894 -37749689 + AT_rich Low_complexity Low_complexity 1 22 0 331 287 18 18 chr2 215507046 215507157 -37749426 + MIR SINE MIR 45 154 -63 2040 158 55 15 chr2 215507451 215507781 -37748802 + MER61A LTR ERV1 1 343 0 1665 241 87 49 chr2 215508221 215508749 -37747834 - MLT1H LTR MaLR 0 549 2 2094 138 0 10 chr2 215509395 215509692 -37746891 + AluSx SINE Alu 2 295 -17 3514 84 34 0 chr2 215509753 215510191 -37746392 + MLT2A2 LTR ERVL 1 453 0 360 217 0 0 chr2 215512406 215512498 -37744085 + (TA)n Simple_repeat Simple_repeat 2 93 0 620 239 41 81 chr2 215513397 215513594 -37742989 - MER5A DNA MER1_type 0 189 1 2497 64 0 19 chr2 215513644 215513957 -37742626 + AluY SINE Alu 1 307 -4 239 216 14 81 chr2 215514651 215514725 -37741858 + L1MB4 LINE L1 16 84 -6775 7687 225 71 72 chr2 215514730 215516287 -37740296 + L1MB4 LINE L1 2773 4330 -2627 2439 120 19 27 chr2 215516287 215516654 -37739929 - THE1B LTR MaLR 0 364 1 7687 225 71 72 chr2 215516654 215518153 -37738430 + L1MB4 LINE L1 4330 5778 -1179 2368 185 38 14 chr2 215518153 215518575 -37738008 - MSTB1 LTR MaLR 0 432 1 7687 225 71 72 chr2 215518575 215518901 -37737682 + L1MB4 LINE L1 5778 6103 -854 2580 59 3 0 chr2 215518906 215519211 -37737372 - AluY SINE Alu -5 306 1 2240 236 119 35 chr2 215519217 215520035 -37736548 - HAL1 LINE L1 -1 2506 1621 1385 136 20 17 chr2 215520109 215520373 -37736210 + L1MB4 LINE L1 6486 6747 -228 602 241 0 0 chr2 215520373 215520485 -37736098 + FLAM_C SINE Alu 2 113 -30 529 60 0 36 chr2 215520486 215520570 -37736013 + (GGGA)n Simple_repeat Simple_repeat 2 82 0 996 117 33 5 chr2 215520570 215520784 -37735799 + GA-rich Low_complexity Low_complexity 1 219 0 1267 171 28 24 chr2 215520787 215521039 -37735544 + L1MB4 LINE L1 6738 6990 -1 1075 289 107 39 chr2 215521051 215521127 -37735456 + L1ME3A LINE L1 3951 4020 -2126 1829 158 3 14 chr2 215521127 215521424 -37735159 + AluSx SINE Alu 1 294 -18 1075 289 107 39 chr2 215521424 215522554 -37734029 + L1ME3A LINE L1 4020 5243 -903 894 291 25 21 chr2 215522595 215522921 -37733662 + L1ME3A LINE L1 5613 5939 -231 2503 62 0 7 chr2 215522943 215523251 -37733332 + AluY SINE Alu 1 306 -5 375 241 11 11 chr2 215523297 215523384 -37733199 + MLT2F LTR ERVL 17 103 -560 2311 116 0 3 chr2 215523402 215523713 -37732870 - AluSg SINE Alu 0 310 1 2137 204 28 2 chr2 215523822 215524219 -37732364 + MER44D DNA MER2_type 1 462 -143 217 256 111 11 chr2 215524324 215524414 -37732169 + MIR3 SINE MIR 110 208 0 2251 110 0 0 chr2 215524527 215524828 -37731755 + AluSx SINE Alu 1 301 -11 207 0 0 0 chr2 215526084 215526107 -37730476 + (T)n Simple_repeat Simple_repeat 1 23 0 194 146 0 24 chr2 215526416 215526457 -37730126 + (GGGAGA)n Simple_repeat Simple_repeat 3 42 0 245 286 0 0 chr2 215526509 215526565 -37730018 + L2 LINE L2 3206 3261 -11 501 303 37 5 chr2 215526854 215527042 -37729541 + MER117 DNA MER1_type 4 197 0 292 266 64 0 chr2 215527790 215527884 -37728699 - MLT1J2 LTR MaLR -286 164 65 380 319 15 0 chr2 215529579 215529714 -37726869 + MIR3 SINE MIR 42 178 -30 1576 209 50 34 chr2 215529860 215530276 -37726307 - L1ME3A LINE L1 -91 6079 5657 2163 212 127 22 chr2 215530277 215530814 -37725769 - MLT1E LTR MaLR 0 593 1 288 241 230 16 chr2 215530814 215530941 -37725642 - L1ME3A LINE L1 -510 5660 5507 2850 102 8 0 chr2 215531392 215531753 -37724830 - THE1B LTR MaLR 0 364 1 2197 93 7 0 chr2 215532627 215532928 -37723655 - AluSp SINE Alu -10 303 1 2086 116 3 0 chr2 215533509 215533810 -37722773 + AluSq SINE Alu 1 302 -11 183 296 37 25 chr2 215534083 215534164 -37722419 + MIR SINE MIR 36 117 -91 189 0 0 0 chr2 215534172 215534193 -37722390 + (A)n Simple_repeat Simple_repeat 1 21 0 452 275 60 33 chr2 215536106 215536288 -37720295 - MER5A DNA MER1_type 0 189 3 245 273 15 30 chr2 215536328 215536394 -37720189 + L2 LINE L2 3206 3270 -2 1612 233 143 29 chr2 215537982 215538211 -37718372 + MER20B DNA MER1_type 121 322 -461 2111 99 3 10 chr2 215538211 215538513 -37718070 - AluSx SINE Alu -12 300 1 2825 184 29 12 chr2 215538517 215539097 -37717486 - L1MB5 LINE L1 0 6174 5585 1612 233 143 29 chr2 215539097 215539205 -37717378 + MER20B DNA MER1_type 324 418 -365 2088 128 3 6 chr2 215539205 215539518 -37717065 - AluSx SINE Alu 0 312 1 1612 233 143 29 chr2 215539518 215539767 -37716816 + MER20B DNA MER1_type 418 781 -2 2126 104 0 16 chr2 215540306 215540623 -37715960 + AluSx SINE Alu 1 312 0 312 59 0 0 chr2 215540697 215540742 -37715841 - MADE1 DNA Mariner 0 80 41 1163 236 50 128 chr2 215541273 215541913 -37714670 + MLT1G LTR MaLR 1 590 0 574 217 21 14 chr2 215542199 215542342 -37714241 + MER103 DNA DNA 22 165 -1 2802 3 0 0 chr2 215543024 215543335 -37713248 + AluYa5 SINE Alu 1 311 0 361 318 55 0 chr2 215543688 215543798 -37712785 + L2 LINE L2 3111 3226 -46 1494 176 20 17 chr2 215544034 215544336 -37712247 - AluJb SINE Alu -9 303 1 710 190 0 0 chr2 215544352 215544473 -37712110 - FLAM_C SINE Alu -19 124 4 322 305 54 58 chr2 215545894 215546153 -37710430 + L2 LINE L2 2834 3091 -181 513 120 0 0 chr2 215546326 215546418 -37710165 + (TGGA)n Simple_repeat Simple_repeat 2 93 0 1069 174 5 38 chr2 215546636 215546848 -37709735 + MER3 DNA MER1_type 5 209 0 271 323 62 10 chr2 215547211 215547307 -37709276 + L2 LINE L2 3168 3268 -4 225 256 51 131 chr2 215547435 215547572 -37709011 - L2 LINE L2 -11 3261 3136 854 245 72 40 chr2 215547679 215548061 -37708522 + LTR16A LTR ERVL 3 450 0 376 290 43 63 chr2 215548096 215548303 -37708280 + HERV16 LTR ERVL 40 242 -4754 288 282 64 36 chr2 215548350 215548460 -37708123 - LTR16A LTR ERVL -337 113 1 198 321 94 9 chr2 215548553 215548659 -37707924 + L2 LINE L2 3116 3230 -42 624 177 0 0 chr2 215548718 215548814 -37707769 - Tigger7 DNA MER2_type 0 2491 2396 * 1497 216 3 10 chr2 215548790 215549082 -37707501 - Tigger7 DNA MER2_type -2197 290 1 2387 330 51 28 chr2 215549329 215550640 -37705943 + HERV16 LTR ERVL 598 2123 -3641 3800 114 125 7 chr2 215550640 215551255 -37705328 - LTR12 LTR ERV1 0 688 1 2387 330 51 28 chr2 215551255 215551390 -37705193 + HERV16 LTR ERVL 2123 2254 -3510 438 182 127 0 chr2 215551479 215551556 -37705027 + Charlie5 DNA MER1_type 1 97 -2527 2074 129 7 0 chr2 215551556 215551859 -37704724 - AluSq SINE Alu -8 305 1 438 182 127 0 chr2 215551859 215551891 -37704692 + Charlie5 DNA MER1_type 97 124 -2500 2305 65 14 0 chr2 215551901 215552194 -37704389 + AluSp SINE Alu 1 297 -16 1062 205 107 3 chr2 215552205 215552552 -37704031 + Charlie5 DNA MER1_type 2242 2624 0 863 320 33 7 chr2 215552554 215552857 -37703726 + HERV16 LTR ERVL 2323 2633 -2363 351 286 228 11 chr2 215552857 215553046 -37703537 + MIR SINE MIR 26 255 -7 1816 139 52 3 chr2 215553253 215553541 -37703042 + AluSx SINE Alu 3 304 -8 240 219 18 2 chr2 215553541 215553595 -37702988 - MER5B DNA MER1_type -43 146 83 207 0 0 0 chr2 215553643 215553666 -37702917 + (TAG)n Simple_repeat Simple_repeat 1 23 0 710 168 0 16 chr2 215553666 215553791 -37702792 - FLAM_C SINE Alu -20 123 1 360 238 62 12 chr2 215553817 215553897 -37702686 - MER5B DNA MER1_type -92 86 3 28 0 0 0 chr2 215554359 215554387 -37702196 + AT_rich Low_complexity Low_complexity 1 28 0 1772 148 14 7 chr2 215554818 215555115 -37701468 + AluJo SINE Alu 1 299 -13 360 271 71 29 chr2 215555300 215555440 -37701143 - L3 LINE CR1 -2 1575 1430 1582 199 137 34 chr2 215555482 215555890 -37700693 + MLT2B1 LTR ERVL 21 470 -50 335 238 12 0 chr2 215556491 215556575 -37700008 + MIR SINE MIR 67 151 -111 1745 159 0 7 chr2 215556597 215556898 -37699685 + AluJb SINE Alu 1 299 -13 270 361 65 0 chr2 215557135 215557243 -37699340 - L2 LINE L2 -46 3226 3112 451 237 38 11 chr2 215557399 215557455 -37699128 + AluJb SINE Alu 66 119 -193 459 0 0 0 chr2 215557455 215557506 -37699077 + (CA)n Simple_repeat Simple_repeat 2 52 0 451 237 38 11 chr2 215557506 215557663 -37698920 + AluJb SINE Alu 119 312 0 1090 65 0 49 chr2 215557692 215558067 -37698516 + (GGGA)n Simple_repeat Simple_repeat 1 356 0 207 314 223 0 chr2 215558177 215558298 -37698285 + MIR SINE MIR 111 258 -4 889 283 14 25 chr2 215558375 215558746 -37697837 + L1ME LINE L1 5420 5783 -379 2181 108 0 0 chr2 215558767 215559074 -37697509 + AluSx SINE Alu 6 312 0 1854 139 3 45 chr2 215560265 215560575 -37696008 - AluJb SINE Alu -15 297 1 3653 113 9 30 chr2 215560601 215561139 -37695444 + MER1A DNA MER1_type 1 527 0 349 301 59 27 chr2 215562856 215563042 -37693541 + L1ME4a LINE L1 5634 5825 -296 1211 125 62 5 chr2 215563044 215563083 -37693500 + AluJb SINE Alu 86 121 -191 533 42 14 0 chr2 215563083 215563155 -37693428 + (TA)n Simple_repeat Simple_repeat 2 74 0 1211 125 62 5 chr2 215563155 215563323 -37693260 + AluJb SINE Alu 121 305 -7 24 53 0 0 chr2 215563393 215563431 -37693152 + AT_rich Low_complexity Low_complexity 1 38 0 337 261 92 60 chr2 215563627 215563845 -37692738 + L1ME4a LINE L1 5894 6118 -3 264 326 145 6 chr2 215564116 215564288 -37692295 + MIR SINE MIR 2 197 -65 189 299 92 43 chr2 215565360 215565524 -37691059 - MIR SINE MIR -71 191 20 449 194 63 74 chr2 215565816 215565991 -37690592 - MLT1I LTR MaLR -17 392 220 1615 168 4 7 chr2 215566139 215566413 -37690170 + AluJo SINE Alu 12 284 -28 473 76 0 43 chr2 215566413 215566505 -37690078 + (GGAA)n Simple_repeat Simple_repeat 1 88 0 833 128 0 32 chr2 215566543 215566668 -37689915 - FLAM_C SINE Alu -19 124 4 4113 132 5 11 chr2 215566799 215567442 -37689141 + L1PA16 LINE L1 5527 6165 -1 1322 197 27 20 chr2 215567936 215568235 -37688348 - AluJb SINE Alu -11 301 1 407 271 55 58 chr2 215569976 215570168 -37686415 - MIR3 SINE MIR -10 198 6 377 270 63 0 chr2 215570220 215570331 -37686252 + L2 LINE L2 3195 3312 -1 1857 108 7 0 chr2 215570378 215570647 -37685936 + AluSx SINE Alu 1 271 -41 400 268 68 64 chr2 215570694 215570914 -37685669 + L2 LINE L2 3003 3223 -90 5956 81 7 5 chr2 215570922 215571736 -37684847 + L1PB1 LINE L1 5334 6149 -2 325 310 0 0 chr2 215571755 215571842 -37684741 + L2 LINE L2 3221 3307 -6 243 248 59 33 chr2 215572197 215572318 -37684265 - MIR3 SINE MIR -20 188 65 289 265 159 45 chr2 215573495 215573627 -37682956 + L2 LINE L2 3121 3267 -5 500 144 52 10 chr2 215573643 215573740 -37682843 - L1MB4 LINE L1 0 6180 6080 2158 119 0 0 chr2 215573748 215574051 -37682532 - AluY SINE Alu -8 303 1 1865 154 3 0 chr2 215574069 215574368 -37682215 + AluJo SINE Alu 6 305 -7 266 323 65 0 chr2 215574567 215574660 -37681923 - L2 LINE L2 -37 3235 3137 463 282 7 34 chr2 215574660 215574809 -37681774 + L2 LINE L2 3169 3313 0 2073 166 22 11 chr2 215575089 215575450 -37681133 + MLT1A1 LTR MaLR 1 365 0 2237 129 33 33 chr2 215575723 215576087 -37680496 + THE1B LTR MaLR 1 364 0 903 281 96 42 chr2 215576137 215576514 -37680069 - LTR16C LTR ERVL -2 489 93 319 245 66 112 chr2 215576668 215576864 -37679719 + MLT1J2 LTR MaLR 2 188 -262 2380 79 0 0 chr2 215576865 215577170 -37679413 + AluY SINE Alu 1 305 -6 842 115 4 179 chr2 215577180 215577414 -37679169 + 7SK RNA RNA 1 193 0 1916 127 3 3 chr2 215577502 215577819 -37678764 - AluSx SINE Alu 0 317 1 489 268 71 49 chr2 215577909 215578092 -37678491 + MLT1J2 LTR MaLR 264 450 0 1975 130 7 0 chr2 215579737 215580029 -37676554 - AluSx SINE Alu -13 299 6 1219 169 69 59 chr2 215580136 215580426 -37676157 - AluJo SINE Alu -19 293 1 205 328 116 78 chr2 215580694 215580926 -37675657 + L2 LINE L2 3017 3257 -15 672 203 29 0 chr2 215581480 215581496 -37675087 - L1MA10 LINE L1 -1 6333 6318 1200 216 35 44 chr2 215581496 215581834 -37674749 - L1ME2 LINE L1 -9 6155 5821 2281 79 0 3 chr2 215582581 215582885 -37673698 + AluY SINE Alu 1 303 -8 353 221 158 11 chr2 215583966 215584061 -37672522 - MIR SINE MIR -139 123 15 180 111 0 0 chr2 215584134 215584161 -37672422 + (TATATG)n Simple_repeat Simple_repeat 3 29 0 1884 226 78 19 chr2 215584214 215584691 -37671892 - MLT1D LTR MaLR 0 505 1 430 264 146 14 chr2 215587050 215587194 -37669389 - MER91A DNA MER1_type -22 174 12 218 235 206 29 chr2 215587663 215587731 -37668852 - MIR SINE MIR -176 86 7 505 193 74 51 chr2 215588527 215588703 -37667880 - Charlie2a DNA MER1_type -1211 1651 1472 499 191 59 44 chr2 215588735 215588751 -37667832 - Charlie2b DNA MER1_type -2090 692 678 558 67 0 0 chr2 215588751 215588826 -37667757 + (TGGA)n Simple_repeat Simple_repeat 3 77 0 499 191 59 44 chr2 215588826 215588945 -37667638 - Charlie2b DNA MER1_type -2104 678 555 * 674 278 110 33 chr2 215588924 215589223 -37667360 - Charlie2b DNA MER1_type -2455 327 6 2132 123 7 0 chr2 215589661 215589970 -37666613 + AluSx SINE Alu 1 311 -1 252 143 0 0 chr2 215590183 215590225 -37666358 + (TGAA)n Simple_repeat Simple_repeat 4 45 0 2128 177 54 50 chr2 215592136 215592639 -37663944 - MLT1D LTR MaLR 0 505 1 1717 164 7 4 chr2 215592802 215593113 -37663470 + AluJo SINE Alu 1 312 0 1449 141 48 59 chr2 215593123 215593413 -37663170 + AluJb SINE Alu 1 287 -25 183 42 0 0 chr2 215593416 215593440 -37663143 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 1784 152 18 12 chr2 215593443 215593771 -37662812 + L1MC1 LINE L1 5989 6318 -15 345 140 0 0 chr2 215593772 215593829 -37662754 + (CA)n Simple_repeat Simple_repeat 2 58 0 1848 147 0 0 chr2 215593835 215594121 -37662462 - AluJb SINE Alu -26 286 1 453 261 189 13 chr2 215594167 215594320 -37662263 - MER5A DNA MER1_type -6 183 4 2074 115 86 9 chr2 215595470 215595818 -37660765 + THE1C LTR MaLR 1 375 0 1050 136 11 23 chr2 215595877 215596054 -37660529 + LTR9 LTR ERV1 438 612 0 3310 115 19 63 chr2 215596069 215596609 -37659974 + HUERS-P3 LTR ERV1 15 530 -8389 864 148 12 35 chr2 215596609 215596778 -37659805 + LTR9 LTR ERV1 367 531 -81 524 15 15 0 chr2 215596782 215596847 -37659736 + (GAAA)n Simple_repeat Simple_repeat 4 69 0 678 239 158 27 chr2 215597137 215597359 -37659224 + MIR SINE MIR 9 259 -3 213 298 96 0 chr2 215598099 215598193 -37658390 + MIR SINE MIR 121 223 -39 245 269 54 11 chr2 215598361 215598454 -37658129 - MIR3 SINE MIR -54 154 58 366 283 49 94 chr2 215598591 215598814 -37657769 - MIR SINE MIR -31 231 19 1884 138 0 7 chr2 215599035 215599324 -37657259 - AluSx SINE Alu -25 287 1 1079 137 6 0 chr2 215600891 215601059 -37655524 - AluSg/x SINE Alu -13 297 129 1619 107 77 8 chr2 215601704 215601965 -37654618 + AluJb SINE Alu 1 279 -33 252 200 211 89 chr2 215601998 215602088 -37654495 - MIR SINE MIR -70 192 92 213 64 0 64 chr2 215602158 215602205 -37654378 + (TTCC)n Simple_repeat Simple_repeat 3 46 0 424 312 58 26 chr2 215605192 215605346 -37651237 + MIR3 SINE MIR 46 204 -4 847 143 0 29 chr2 215605367 215605507 -37651076 - AluJo SINE Alu -176 136 1 27 29 0 0 chr2 215606063 215606097 -37650486 + AT_rich Low_complexity Low_complexity 1 34 0 531 141 98 0 chr2 215607729 215607821 -37648762 - MER58A DNA MER1_type -3 221 121 4723 82 9 26 chr2 215607822 215608467 -37648116 - MER51A LTR ERV1 0 634 1 3282 101 19 72 chr2 215608468 215608899 -37647684 + MER41B LTR ERV1 1 498 -137 1777 129 21 7 chr2 215608899 215609186 -37647397 - AluJb SINE Alu -7 305 15 3282 101 19 72 chr2 215609186 215609318 -37647265 + MER41B LTR ERV1 498 635 0 552 200 15 82 chr2 215609318 215609404 -37647179 - MER58A DNA MER1_type -215 126 51 1891 169 77 6 chr2 215609404 215609741 -37646842 + MLT1A1 LTR MaLR 5 365 0 552 200 15 82 chr2 215609741 215609789 -37646794 - MER58A DNA MER1_type -290 51 1 262 400 24 0 chr2 215609790 215609915 -37646668 + L2 LINE L2 2441 2568 -746 594 214 40 20 chr2 215610044 215610245 -37646338 - HsTC2a DNA Tc2 0 742 538 2843 160 128 18 chr2 215610271 215610883 -37645700 + LTR48 LTR ERV1 108 786 -1 1183 230 42 44 chr2 215610883 215611234 -37645349 - HsTC2a DNA Tc2 -279 465 116 189 0 0 0 chr2 215611280 215611301 -37645282 + (TA)n Simple_repeat Simple_repeat 2 22 0 2075 129 0 0 chr2 215611463 215611766 -37644817 + AluSq SINE Alu 1 303 -10 2167 111 0 16 chr2 215612276 215612592 -37643991 + AluSx SINE Alu 1 311 -1 25 51 0 0 chr2 215614468 215614507 -37642076 + AT_rich Low_complexity Low_complexity 1 39 0 1397 153 84 114 chr2 215614559 215615023 -37641560 - LTR7 LTR ERV1 0 450 1 3534 123 95 22 chr2 215615629 215615717 -37640866 - LTR9B LTR ERV1 0 644 564 6149 54 32 3 chr2 215615717 215616475 -37640108 + LTR17 LTR ERV1 1 780 0 3534 123 95 22 chr2 215616475 215616921 -37639662 - LTR9B LTR ERV1 -80 564 59 2574 42 0 0 chr2 215616921 215617232 -37639351 + AluY SINE Alu 1 311 0 3534 123 95 22 chr2 215617232 215617296 -37639287 - LTR9B LTR ERV1 -585 59 1 1383 181 30 102 chr2 215617461 215617814 -37638769 - MLT1A2 LTR MaLR 0 374 52 2154 127 86 15 chr2 215617814 215618152 -37638431 + THE1B LTR MaLR 3 364 0 1383 181 30 102 chr2 215618152 215618201 -37638382 - MLT1A2 LTR MaLR -322 52 1 1173 191 0 9 chr2 215618258 215618478 -37638105 - AluJb SINE Alu -8 304 87 424 237 333 26 chr2 215618504 215618816 -37637767 - MLT1H LTR MaLR -120 429 22 1997 111 0 27 chr2 215618986 215619284 -37637299 + AluSg SINE Alu 1 290 -20 2237 106 0 0 chr2 215619410 215619711 -37636872 + AluSx SINE Alu 1 301 -11 2212 112 0 0 chr2 215620555 215620859 -37635724 + AluSx SINE Alu 1 304 -8 264 30 0 0 chr2 215620862 215620895 -37635688 + (CA)n Simple_repeat Simple_repeat 1 33 0 2258 108 0 0 chr2 215621768 215622073 -37634510 + AluSg SINE Alu 1 305 -5 1852 151 0 3 chr2 215623647 215623938 -37632645 + AluJb SINE Alu 1 290 -22 704 163 143 20 chr2 215624295 215624442 -37632141 + FRAM SINE Alu 1 156 -20 1560 152 33 15 chr2 215625290 215625560 -37631023 + AluJo SINE Alu 18 292 -20 1435 77 10 5 chr2 215626008 215626204 -37630379 + AluSx SINE Alu 1 197 -115 693 131 0 0 chr2 215626454 215626561 -37630022 + AluSc SINE Alu 200 306 -3 1896 159 0 0 chr2 215626937 215627233 -37629350 + AluSx SINE Alu 1 296 -16 227 143 48 0 chr2 215627239 215627281 -37629302 - MER103 DNA DNA -114 52 9 809 172 0 0 chr2 215627336 215627470 -37629113 - FLAM_A SINE Alu -1 141 8 231 282 56 14 chr2 215627540 215627611 -37628972 + MIR SINE MIR 57 130 -132 374 303 72 62 chr2 215627731 215627926 -37628657 + HAL1 LINE L1 1 197 -2310 545 223 37 13 chr2 215627944 215628191 -37628392 + MLT1G1 LTR MaLR 1 215 -315 297 153 0 34 chr2 215628176 215628235 -37628348 + MLT1G1 LTR MaLR 322 378 -212 * 572 223 147 102 chr2 215628238 215628503 -37628080 + L2 LINE L2 3037 3313 0 213 269 0 0 chr2 215628581 215628648 -37627935 + (TA)n Simple_repeat Simple_repeat 2 68 0 299 248 9 28 chr2 215628689 215628798 -37627785 + HAL1 LINE L1 1036 1142 -1365 478 253 134 75 chr2 215628822 215629498 -37627085 + HAL1 LINE L1 1119 1754 -753 8491 76 4 1 chr2 215629498 215630566 -37626017 - MER11C LTR ERVK 0 1071 1 478 253 134 75 chr2 215630566 215630629 -37625954 + HAL1 LINE L1 1754 1812 -695 2157 98 7 3 chr2 215630629 215630926 -37625657 - AluSx SINE Alu -13 299 2 478 253 134 75 chr2 215630926 215631007 -37625576 + HAL1 LINE L1 1812 2507 0 287 221 87 54 chr2 215631023 215631172 -37625411 + L1ME4a LINE L1 5964 6117 -4 311 243 68 19 chr2 215631253 215631356 -37625227 + HAL1 LINE L1 1194 1301 -1206 680 185 8 8 chr2 215631552 215631671 -37624912 + FLAM_C SINE Alu 7 125 -18 1404 160 12 92 chr2 215631682 215632019 -37624564 + AluJo SINE Alu 1 310 -2 1654 132 79 4 chr2 215632152 215632432 -37624151 - AluSx SINE Alu -11 301 1 228 164 110 55 chr2 215632964 215633037 -37623546 + LTR69 LTR ERVL 120 196 -392 801 167 26 83 chr2 215633071 215633263 -37623320 + MER20 DNA MER1_type 30 210 -9 1571 195 118 76 chr2 215634160 215634662 -37621921 - MER74A LTR ERVL -21 537 15 2294 92 14 0 chr2 215634665 215634957 -37621626 + AluSp SINE Alu 1 296 -17 2544 114 40 42 chr2 215635314 215635663 -37620920 + L1MB7 LINE L1 5739 6088 -96 2178 127 3 3 chr2 215635663 215635955 -37620628 - AluSx SINE Alu -20 292 1 2544 114 40 42 chr2 215635955 215636052 -37620531 + L1MB7 LINE L1 6088 6184 0 1882 146 0 18 chr2 215636821 215637101 -37619482 + AluJb SINE Alu 1 275 -37 533 243 21 48 chr2 215637459 215637648 -37618935 - MER5A DNA MER1_type 0 189 6 487 250 24 42 chr2 215637817 215637985 -37618598 - MIR SINE MIR 0 262 98 1330 162 30 49 chr2 215638187 215638453 -37618130 - MLT1C LTR MaLR 0 467 207 2786 147 28 0 chr2 215638461 215638918 -37617665 + MER31A LTR ERV1 3 472 -13 1891 153 3 3 chr2 215638919 215639214 -37617369 - AluSx SINE Alu -17 295 1 1222 120 10 26 chr2 215639232 215639424 -37617159 - MLT1C LTR MaLR -257 210 22 1073 130 12 0 chr2 215639546 215639708 -37616875 + FRAM SINE Alu 9 172 -4 216 275 42 58 chr2 215640896 215641016 -37615567 - L2 LINE L2 -246 3026 2909 311 248 132 8 chr2 215641198 215641319 -37615264 - Charlie8 DNA MER1_type -2162 255 120 282 202 22 11 chr2 215641319 215641408 -37615175 + (TA)n Simple_repeat Simple_repeat 2 91 0 1866 168 0 3 chr2 215641480 215641778 -37614805 - AluJo SINE Alu -10 302 6 342 224 0 0 chr2 215642524 215642609 -37613974 + (TG)n Simple_repeat Simple_repeat 1 85 0 1923 146 26 16 chr2 215643485 215643833 -37612750 - AluJo SINE Alu 0 351 1 2382 144 98 55 chr2 215644452 215644581 -37612002 + LTR64 LTR ERVK 1 123 -390 2134 121 3 26 chr2 215644581 215644888 -37611695 + AluSq SINE Alu 1 300 -13 2382 144 98 55 chr2 215644888 215645204 -37611379 + LTR64 LTR ERVK 123 471 -42 1835 118 0 0 chr2 215645204 215645450 -37611133 - AluSg SINE Alu -64 246 1 2382 144 98 55 chr2 215645450 215645495 -37611088 + LTR64 LTR ERVK 471 513 0 253 189 40 14 chr2 215645638 215645712 -37610871 - LTR23 LTR ERV1 0 437 362 1029 172 12 0 chr2 215645777 215645940 -37610643 - AluSg/x SINE Alu -14 298 134 2274 108 0 0 chr2 215645940 215646236 -37610347 - AluSx SINE Alu -16 296 1 1406 115 9 14 chr2 215646239 215646457 -37610126 - LTR56 LTR ERV1 -224 221 5 1684 159 45 10 chr2 215646532 215646822 -37609761 + AluJo SINE Alu 1 300 -12 1805 168 118 86 chr2 215646851 215647418 -37609165 + LTR49 LTR ERV1 1 585 -10 401 283 48 57 chr2 215647421 215647651 -37608932 + LTR49-int LTR ERV1 1 228 -6103 1100 186 122 39 chr2 215647701 215647980 -37608603 - AluJo SINE Alu 0 302 1 415 239 106 21 chr2 215648019 215648161 -37608422 + LTR49-int LTR ERV1 454 607 -4329 226 154 0 0 chr2 215648167 215648206 -37608377 - MER31A LTR ERV1 -182 303 265 920 254 5 10 chr2 215648213 215648410 -37608173 + LTR49-int LTR ERV1 1908 2103 -4228 1504 174 58 13 chr2 215648440 215648751 -37607832 + LTR49-int LTR ERV1 2948 3272 -3059 428 233 19 10 chr2 215648798 215648901 -37607682 + LTR49-int LTR ERV1 3264 3367 -2964 626 169 32 24 chr2 215648932 215649056 -37607527 + LTR49-int LTR ERV1 3348 3472 -2859 653 186 0 25 chr2 215649056 215649174 -37607409 + AluSq/x SINE Alu 15 129 -183 32 26 0 0 chr2 215649174 215649213 -37607370 + AT_rich Low_complexity Low_complexity 1 39 0 1432 163 68 61 chr2 215649222 215649348 -37607235 + AluJb SINE Alu 1 125 -187 2148 127 0 7 chr2 215649348 215649648 -37606935 - AluSx SINE Alu -14 298 1 1432 163 68 61 chr2 215649648 215649815 -37606768 + AluJb SINE Alu 125 296 -16 2168 127 0 7 chr2 215649822 215650121 -37606462 + AluSx SINE Alu 1 297 -15 2021 153 0 3 chr2 215650125 215650426 -37606157 - AluJb SINE Alu -8 304 5 528 223 15 104 chr2 215650430 215650557 -37606026 + MER83B-int LTR ERV1 2709 2846 -2034 1057 165 161 84 chr2 215650557 215650675 -37605908 + AluJo SINE Alu 1 108 -194 288 0 0 0 chr2 215650675 215650707 -37605876 + (TA)n Simple_repeat Simple_repeat 2 33 0 1057 165 161 84 chr2 215650707 215650861 -37605722 + AluJo SINE Alu 108 294 -8 528 223 15 104 chr2 215650861 215650893 -37605690 + MER83B-int LTR ERV1 2846 2879 -2001 2458 43 0 0 chr2 215650893 215651200 -37605383 + AluY SINE Alu 1 307 0 528 223 15 104 chr2 215651200 215651307 -37605276 + MER83B-int LTR ERV1 2879 2953 -1927 279 216 0 0 chr2 215651457 215651508 -37605075 - MER116 DNA Mariner -29 51 1 321 169 12 60 chr2 215651550 215651633 -37604950 + L1MB7 LINE L1 6097 6175 -9 303 233 111 0 chr2 215652355 215652421 -37604162 - MER5A DNA MER1_type -80 109 29 198 103 0 0 chr2 215652421 215652450 -37604133 + (CTG)n Simple_repeat Simple_repeat 1 29 0 303 233 111 0 chr2 215652450 215652473 -37604110 - MER5A DNA MER1_type -160 29 10 1146 203 31 46 chr2 215652491 215652816 -37603767 - MER33 DNA MER1_type 0 324 5 2351 83 3 0 chr2 215653289 215653591 -37602992 + AluSp SINE Alu 5 307 -6 4144 98 148 116 chr2 215653596 215655016 -37601567 + pTR5 LTR ERV1 732 2438 0 2300 103 71 31 chr2 215655280 215655630 -37600953 + THE1B LTR MaLR 1 364 0 450 309 147 18 chr2 215655630 215655902 -37600681 - L3 LINE CR1 -58 1519 1213 198 209 0 0 chr2 215655950 215655993 -37600590 + (TA)n Simple_repeat Simple_repeat 1 43 0 1320 238 77 30 chr2 215656009 215656125 -37600458 - L2 LINE L2 -1605 1709 1600 1745 207 22 3 chr2 215656125 215656483 -37600100 - MLT1A1 LTR MaLR 0 365 1 1320 238 77 30 chr2 215656483 215656833 -37599750 - L2 LINE L2 -1714 1600 1221 1912 164 10 3 chr2 215656868 215657173 -37599410 - AluJb SINE Alu -5 307 1 2471 85 0 3 chr2 215657277 215657582 -37599001 + AluSx SINE Alu 1 304 -8 181 362 114 0 chr2 215657583 215657688 -37598895 - MIR3 SINE MIR -27 181 65 243 320 129 0 chr2 215657697 215657844 -37598739 + L3 LINE CR1 1269 1434 -143 2242 95 0 30 chr2 215657857 215658161 -37598422 + AluSg SINE Alu 1 295 -15 204 40 0 0 chr2 215658367 215658392 -37598191 + (A)n Simple_repeat Simple_repeat 1 25 0 2530 59 0 7 chr2 215658633 215658936 -37597647 - AluY SINE Alu -10 301 1 1605 235 94 40 chr2 215659241 215659739 -37596844 - REP3 LTR ERV -35 527 3 2316 95 0 19 chr2 215660626 215660942 -37595641 + AluSx SINE Alu 1 310 -2 365 250 13 0 chr2 215660963 215661039 -37595544 - MIR3 SINE MIR -48 160 84 635 122 0 0 chr2 215662032 215662130 -37594453 - AluSg/x SINE Alu -1 308 211 2139 120 3 0 chr2 215662955 215663255 -37593328 - AluSx SINE Alu -7 305 5 372 65 32 16 chr2 215663270 215663332 -37593251 + HSMAR2 DNA Mariner 1192 1254 -48 1255 180 6 114 chr2 215663334 215663667 -37592916 - AluJb SINE Alu -4 298 2 2014 125 41 3 chr2 215663673 215663968 -37592615 - AluSx SINE Alu -6 306 1 2333 102 7 0 chr2 215664121 215664424 -37592159 - AluSg SINE Alu -5 305 1 743 232 152 9 chr2 215664715 215664939 -37591644 - MIR SINE MIR -5 257 2 1253 0 43 0 chr2 215665298 215665507 -37591076 + (TAAAA)n Simple_repeat Simple_repeat 1 218 0 514 139 13 0 chr2 215666259 215666338 -37590245 + AluS SINE Alu 5 84 -228 1286 174 141 55 chr2 215666803 215667166 -37589417 + MSTD LTR MaLR 1 394 -2 730 155 9 9 chr2 215667256 215667372 -37589211 - FLAM_C SINE Alu -26 117 2 2184 97 10 27 chr2 215667402 215667700 -37588883 + AluSx SINE Alu 1 293 -19 1780 165 10 7 chr2 215668258 215668549 -37588034 + AluJb SINE Alu 1 292 -20 713 142 0 0 chr2 215668589 215668695 -37587888 + AluJb SINE Alu 192 297 -15 297 122 0 0 chr2 215668828 215668869 -37587714 - MSTA LTR MaLR 0 428 388 1819 148 0 7 chr2 215668869 215669146 -37587437 + AluJo SINE Alu 1 275 -37 1212 135 94 90 chr2 215669150 215669417 -37587166 - MSTA LTR MaLR -160 268 1 762 92 9 18 chr2 215669438 215669547 -37587036 + AluJo SINE Alu 29 136 -176 1790 164 0 33 chr2 215669549 215669854 -37586729 + AluJb SINE Alu 1 295 -17 258 105 0 0 chr2 215671425 215671463 -37585120 + (GAAA)n Simple_repeat Simple_repeat 2 39 0 238 200 0 18 chr2 215672063 215672118 -37584465 + (CATATA)n Simple_repeat Simple_repeat 4 57 0 180 253 0 0 chr2 215673155 215673230 -37583353 + (TA)n Simple_repeat Simple_repeat 2 76 0 198 0 0 0 chr2 215675000 215675022 -37581561 + (A)n Simple_repeat Simple_repeat 1 22 0 205 70 70 0 chr2 215675730 215675773 -37580810 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 26 30 0 0 chr2 215677265 215677298 -37579285 + AT_rich Low_complexity Low_complexity 1 33 0 27 0 0 0 chr2 215677724 215677751 -37578832 + AT_rich Low_complexity Low_complexity 1 27 0 2283 110 0 0 chr2 215682950 215683249 -37573334 + AluSx SINE Alu 1 299 -13 2128 125 3 0 chr2 215683314 215683610 -37572973 + AluSx SINE Alu 1 297 -15 2116 148 0 0 chr2 215684089 215684399 -37572184 + AluSx SINE Alu 1 310 -2 2175 110 0 7 chr2 215684538 215684828 -37571755 - AluSq SINE Alu -20 293 6 2400 84 0 0 chr2 215684832 215685128 -37571455 - AluSg SINE Alu -14 296 1 2081 103 11 0 chr2 215685588 215685869 -37570714 + AluSx SINE Alu 12 295 -17 875 240 131 29 chr2 215686495 215686612 -37569971 + HsTC2 DNA Tc2 5 109 -1789 285 29 0 0 chr2 215686612 215686646 -37569937 + (CA)n Simple_repeat Simple_repeat 2 35 0 875 240 131 29 chr2 215686646 215687116 -37569467 + HsTC2 DNA Tc2 109 1885 -13 2287 107 3 0 chr2 215687346 215687646 -37568937 + AluSq SINE Alu 1 301 -12 711 286 168 7 chr2 215688271 215688568 -37568015 - L2 LINE L2 0 3313 2969 417 167 0 0 chr2 215688568 215688628 -37567955 + AluJ/FLAM SINE Alu 2 61 -251 228 284 0 27 chr2 215688630 215688704 -37567879 - L2 LINE L2 -555 2759 2688 767 221 129 18 chr2 215688704 215688921 -37567662 + L1ME1 LINE L1 5892 6132 -34 680 238 26 57 chr2 215688958 215689133 -37567450 - L2 LINE L2 -622 2692 2522 1959 148 3 10 chr2 215689133 215689437 -37567146 + AluSx SINE Alu 1 302 -10 680 238 26 57 chr2 215689437 215689454 -37567129 - L2 LINE L2 -792 2522 2506 30 89 0 0 chr2 215689606 215689685 -37566898 + AT_rich Low_complexity Low_complexity 1 79 0 2419 84 3 0 chr2 215689821 215690117 -37566466 + AluY SINE Alu 1 297 -14 21 0 0 0 chr2 215690396 215690417 -37566166 + AT_rich Low_complexity Low_complexity 1 21 0 2118 118 7 3 chr2 215690427 215690724 -37565859 + AluSx SINE Alu 2 299 -13 2372 123 22 25 chr2 215690885 215691250 -37565333 + THE1B LTR MaLR 1 364 0 12357 90 2 30 chr2 215691250 215692154 -37564429 + THE1B-int LTR MaLR 1 840 -740 2155 119 0 7 chr2 215692154 215692449 -37564134 + AluSx SINE Alu 3 295 -17 12357 90 2 30 chr2 215692449 215693170 -37563413 + THE1B-int LTR MaLR 840 1580 0 2276 128 21 53 chr2 215693170 215693546 -37563037 + THE1B LTR MaLR 1 364 0 234 263 101 30 chr2 215693565 215693664 -37562919 - MIR SINE MIR -80 128 23 261 219 101 67 chr2 215694097 215694216 -37562367 - MER112 DNA MER1_type -137 123 1 2134 119 10 16 chr2 215694685 215694995 -37561588 - AluSq SINE Alu -5 308 1 1505 174 72 7 chr2 215695188 215695464 -37561119 + AluJb SINE Alu 1 294 -18 856 242 23 45 chr2 215696685 215696949 -37559634 + MIR SINE MIR 1 258 -4 21 0 0 0 chr2 215697146 215697167 -37559416 + AT_rich Low_complexity Low_complexity 1 21 0 841 87 0 127 chr2 215697424 215697574 -37559009 + FLAM_C SINE Alu 1 131 -2 2172 114 7 3 chr2 215698164 215698463 -37558120 - AluSq SINE Alu -13 300 1 2314 92 3 10 chr2 215698634 215698939 -37557644 + AluSg SINE Alu 1 303 -7 1055 146 0 0 chr2 215699269 215699427 -37557156 - AluY SINE Alu -18 293 136 2155 117 0 7 chr2 215699466 215699765 -37556818 + AluSq SINE Alu 1 297 -16 2131 126 3 3 chr2 215699951 215700252 -37556331 + AluSg SINE Alu 1 301 -9 322 332 27 80 chr2 215700794 215700981 -37555602 - L2 LINE L2 -94 3178 3002 2350 100 0 7 chr2 215701295 215701605 -37554978 - AluSg SINE Alu -2 308 1 2305 104 0 0 chr2 215701795 215702092 -37554491 + AluSq SINE Alu 1 297 -16 243 0 0 0 chr2 215702092 215702119 -37554464 + (TA)n Simple_repeat Simple_repeat 2 28 0 742 58 10 39 chr2 215702142 215702245 -37554338 + HY3 scRNA scRNA 1 100 -1 544 194 0 0 chr2 215702315 215702408 -37554175 + AluJb SINE Alu 207 299 -13 1820 174 0 3 chr2 215702454 215702748 -37553835 - AluSx SINE Alu -19 293 1 2201 114 3 7 chr2 215702814 215703120 -37553463 + AluSx SINE Alu 1 305 -7 23 0 0 0 chr2 215703125 215703148 -37553435 + AT_rich Low_complexity Low_complexity 1 23 0 263 156 65 0 chr2 215703159 215703236 -37553347 + (TA)n Simple_repeat Simple_repeat 1 82 0 354 231 0 11 chr2 215703408 215703499 -37553084 + L1ME4a LINE L1 5793 5882 -239 216 158 0 0 chr2 215703685 215703723 -37552860 + (CA)n Simple_repeat Simple_repeat 2 39 0 377 216 105 59 chr2 215703723 215703876 -37552707 + L1ME4a LINE L1 5960 6119 -2 1879 147 10 26 chr2 215703966 215704273 -37552310 + AluJo SINE Alu 1 302 -10 2437 90 0 3 chr2 215705425 215705737 -37550846 - AluY SINE Alu 0 311 1 310 269 69 35 chr2 215705791 215705936 -37550647 + MER117 DNA MER1_type 1 150 -47 249 323 24 17 chr2 215706451 215706582 -37550001 + MER5A DNA MER1_type 1 141 -48 1672 175 39 7 chr2 215706739 215707024 -37549559 + AluSx SINE Alu 1 294 -18 216 254 0 0 chr2 215707031 215707090 -37549493 - L2 LINE L2 -214 3058 3000 1329 116 0 11 chr2 215707636 215707825 -37548758 + AluSg/x SINE Alu 116 302 -8 2921 247 67 5 chr2 215708220 215709047 -37547536 + L1PB1 LINE L1 6 883 -5980 12828 161 82 10 chr2 215709051 215713271 -37543312 + L1PB1 LINE L1 2318 6867 0 529 241 9 0 chr2 215713360 215713472 -37543111 - MER5C DNA MER1_type -201 123 11 185 309 24 24 chr2 215713661 215713745 -37542838 + MIR SINE MIR 124 207 -55 3424 173 9 21 chr2 215714109 215714786 -37541797 + L1PB4 LINE L1 5433 6151 -5 1668 138 123 7 chr2 215715099 215715368 -37541215 + AluJb SINE Alu 1 300 -2 2199 101 3 16 chr2 215715665 215715973 -37540610 + AluSp SINE Alu 1 304 -9 22 70 0 0 chr2 215716037 215716080 -37540503 + AT_rich Low_complexity Low_complexity 1 43 0 2301 104 7 0 chr2 215716080 215716389 -37540194 + AluSx SINE Alu 2 312 0 541 198 129 73 chr2 215716391 215716562 -37540021 + L1M4 LINE L1 3332 3521 -2625 2125 127 24 0 chr2 215716562 215716854 -37539729 + AluSx SINE Alu 3 301 -11 541 198 129 73 chr2 215716854 215716914 -37539669 + L1M4 LINE L1 3521 3576 -2570 397 202 0 11 chr2 215717427 215717521 -37539062 + L1MEc LINE L1 2229 2321 -4075 * 1770 230 85 16 chr2 215717518 215718415 -37538168 + L1MEc LINE L1 1952 3029 -3186 1517 153 88 29 chr2 215718415 215718689 -37537894 + AluJb SINE Alu 1 290 -22 1770 230 85 16 chr2 215718689 215718948 -37537635 + L1MEc LINE L1 3029 3269 -2946 2259 88 3 0 chr2 215718959 215719244 -37537339 + AluSx SINE Alu 11 296 -16 1599 183 45 0 chr2 215719252 215719541 -37537042 + AluJo SINE Alu 1 302 -10 2205 110 0 0 chr2 215719713 215720019 -37536564 - AluSg SINE Alu 0 306 1 2440 76 3 0 chr2 215720031 215720335 -37536248 - AluY SINE Alu -6 305 1 1718 179 7 7 chr2 215720459 215720744 -37535839 + AluJo SINE Alu 1 285 -27 198 0 0 0 chr2 215720745 215720767 -37535816 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 206 176 20 0 chr2 215720919 215720970 -37535613 + (TGAA)n Simple_repeat Simple_repeat 1 52 0 220 239 0 0 chr2 215721031 215721077 -37535506 + A-rich Low_complexity Low_complexity 1 46 0 468 264 9 0 chr2 215722425 215722535 -37534048 + MIR3 SINE MIR 88 198 -10 1148 109 0 19 chr2 215722804 215722960 -37533623 + AluSq SINE Alu 1 153 -160 574 128 0 0 chr2 215722960 215723046 -37533537 + AluS SINE Alu 226 311 -1 2158 95 17 0 chr2 215723332 215723626 -37532957 - AluSg SINE Alu -11 299 1 2257 113 0 7 chr2 215723766 215724068 -37532515 - AluSx SINE Alu -12 300 1 2506 44 0 17 chr2 215724406 215724704 -37531879 - AluY SINE Alu -18 293 1 1837 152 4 0 chr2 215724806 215725082 -37531501 - AluJb SINE Alu -35 277 1 1582 183 3 33 chr2 215725161 215725467 -37531116 + AluJo SINE Alu 1 297 -15 2303 100 0 3 chr2 215726401 215726700 -37529883 + AluSx SINE Alu 3 300 -12 2403 97 0 3 chr2 215726761 215727071 -37529512 + AluSg SINE Alu 2 310 0 22 35 0 0 chr2 215727146 215727175 -37529408 + AT_rich Low_complexity Low_complexity 1 29 0 2412 57 0 3 chr2 215727237 215727535 -37529048 + AluY SINE Alu 2 298 -13 231 36 0 0 chr2 215727765 215727793 -37528790 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 680 189 121 15 chr2 215727796 215727928 -37528655 - AluJo SINE Alu -30 282 137 1705 201 63 92 chr2 215728119 215728211 -37528372 + Charlie1a DNA MER1_type 2 95 -2666 823 144 0 43 chr2 215728211 215728350 -37528233 - AluJo SINE Alu -169 133 1 1705 201 63 92 chr2 215728350 215728742 -37527841 + Charlie1a DNA MER1_type 95 473 -2288 2287 80 0 23 chr2 215728742 215729042 -37527541 - AluSg SINE Alu -17 293 1 1705 201 63 92 chr2 215729042 215729077 -37527506 + Charlie1a DNA MER1_type 473 507 -948 1622 148 86 22 chr2 215729077 215729355 -37527228 + AluJo SINE Alu 1 296 -16 515 169 92 0 chr2 215729357 215729487 -37527096 + Charlie1a DNA MER1_type 1313 1454 -1 375 258 91 88 chr2 215729487 215729828 -37526755 + L1ME LINE L1 5406 5747 -374 29 60 0 0 chr2 215730010 215730060 -37526523 + AT_rich Low_complexity Low_complexity 1 50 0 2388 98 0 0 chr2 215730392 215730689 -37525894 - AluSq SINE Alu -16 297 1 947 138 0 43 chr2 215730733 215730871 -37525712 - FLAM_C SINE Alu -1 132 1 472 244 189 39 chr2 215730872 215731065 -37525518 - L1MC/D LINE L1 -311 5810 5647 2127 131 0 0 chr2 215731065 215731363 -37525220 - AluSx SINE Alu -14 298 1 849 200 0 0 chr2 215731365 215731495 -37525088 - AluJo/FLAM SINE Alu -172 130 1 472 244 189 39 chr2 215731495 215731688 -37524895 - L1MC/D LINE L1 -474 5647 5356 300 316 58 5 chr2 215731744 215731950 -37524633 + L1M4 LINE L1 4949 5165 -981 2156 167 18 0 chr2 215732241 215732577 -37524006 - MER2 DNA MER2_type -2 342 1 189 74 0 0 chr2 215733971 215733998 -37522585 + (GA)n Simple_repeat Simple_repeat 2 28 0 299 290 70 38 chr2 215734069 215734240 -37522343 - MIR SINE MIR -57 151 34 689 143 19 0 chr2 215734261 215734366 -37522217 + L1PB1 LINE L1 6042 6148 -3 271 213 33 0 chr2 215734388 215734449 -37522134 - L1M4 LINE L1 -2585 3561 3499 1255 103 11 0 chr2 215734478 215734663 -37521920 - L1M1 LINE L1 -5360 2205 2019 2405 82 3 0 chr2 215734688 215734992 -37521591 + AluY SINE Alu 1 305 -6 2222 116 7 0 chr2 215735002 215735305 -37521278 + AluSx SINE Alu 1 305 -7 495 164 34 119 chr2 215735311 215735488 -37521095 + MER103 DNA DNA 4 165 -1 910 132 0 22 chr2 215735492 215735628 -37520955 + FLAM_C SINE Alu 1 133 0 2304 117 0 0 chr2 215735648 215735955 -37520628 + AluSx SINE Alu 1 307 -5 195 69 0 0 chr2 215736290 215736319 -37520264 + (TG)n Simple_repeat Simple_repeat 1 29 0 1698 200 3 7 chr2 215736471 215736781 -37519802 + AluJo SINE Alu 1 309 -3 2144 102 10 10 chr2 215736800 215737093 -37519490 + AluSx SINE Alu 1 293 -19 2530 58 3 0 chr2 215737113 215737407 -37519176 - AluSp SINE Alu -17 296 2 1797 170 10 7 chr2 215737676 215737965 -37518618 - AluJb SINE Alu -22 290 1 213 94 0 0 chr2 215739368 215739400 -37517183 + (GAAAA)n Simple_repeat Simple_repeat 4 35 0 2081 113 34 0 chr2 215740073 215740366 -37516217 + AluSq SINE Alu 1 303 -10 22 80 0 0 chr2 215740620 215740670 -37515913 + AT_rich Low_complexity Low_complexity 1 50 0 594 277 33 9 chr2 215741145 215741369 -37515214 + MIR SINE MIR 36 262 0 5978 130 31 45 chr2 215741645 215741847 -37514736 + L1MA5A LINE L1 4908 5111 -1186 2281 105 3 3 chr2 215741847 215742151 -37514432 + AluSg SINE Alu 5 308 -2 5978 130 31 45 chr2 215742151 215742632 -37513951 + L1MA5A LINE L1 5111 5597 -700 2036 139 13 0 chr2 215742632 215742933 -37513650 + AluSx SINE Alu 1 305 -7 5978 130 31 45 chr2 215742933 215743180 -37513403 + L1MA5A LINE L1 5597 5846 -451 2193 125 3 0 chr2 215743180 215743483 -37513100 + AluSx SINE Alu 3 306 -6 5978 130 31 45 chr2 215743483 215743620 -37512963 + L1MA5A LINE L1 5846 5983 -314 2202 109 13 0 chr2 215743620 215743923 -37512660 + AluSq SINE Alu 1 307 -6 5978 130 31 45 chr2 215743923 215744256 -37512327 + L1MA5A LINE L1 5983 6291 -6 21 71 0 0 chr2 215744256 215744298 -37512285 + AT_rich Low_complexity Low_complexity 1 42 0 555 117 0 0 chr2 215744530 215744607 -37511976 + AluSg/x SINE Alu 216 292 -20 2047 146 3 7 chr2 215744745 215745054 -37511529 - AluJo SINE Alu -4 308 1 930 217 5 26 chr2 215745074 215745263 -37511320 + MER58A DNA MER1_type 5 189 -35 2022 150 0 3 chr2 215745349 215745655 -37510928 - AluJb SINE Alu -7 305 1 1616 135 126 16 chr2 215745796 215746114 -37510469 + Tigger2a DNA MER2_type 18 370 -64 578 127 0 0 chr2 215746119 215746198 -37510385 + AluS SINE Alu 2 80 -232 252 268 56 14 chr2 215746216 215746287 -37510296 + Tigger2a DNA MER2_type 371 444 0 863 161 0 7 chr2 215746646 215746783 -37509800 + AluJo SINE Alu 1 136 -176 1852 152 0 48 chr2 215746783 215747092 -37509491 + AluSx SINE Alu 1 294 -18 2286 101 16 0 chr2 215747093 215747399 -37509184 + AluY SINE Alu 1 311 0 352 226 226 29 chr2 215747413 215747550 -37509033 - HAL1b LINE L1 -812 536 373 612 179 120 0 chr2 215747626 215747638 -37508945 - FLAM_A SINE Alu 0 465 456 2105 102 4 4 chr2 215747638 215747912 -37508671 - AluSq SINE Alu -39 274 1 612 179 120 0 chr2 215747912 215748075 -37508508 - FLAM_A SINE Alu -9 456 3 300 267 124 43 chr2 215748086 215748247 -37508336 - HAL1b LINE L1 -1110 238 65 2139 117 3 7 chr2 215748930 215749229 -37507354 - AluSx SINE Alu -11 301 4 1725 181 27 7 chr2 215749492 215749791 -37506792 - AluJo SINE Alu -7 305 1 1847 176 3 3 chr2 215750162 215750469 -37506114 - AluJb SINE Alu -5 307 1 782 133 15 30 chr2 215750528 215750663 -37505920 - FLAM_C SINE Alu 0 133 1 1953 93 4 4 chr2 215750986 215751244 -37505339 + AluSq SINE Alu 1 258 -55 2181 103 3 0 chr2 215751312 215751594 -37504989 + AluSp SINE Alu 1 283 -30 914 86 0 0 chr2 215751594 215751710 -37504873 + AluSp/q SINE Alu 184 299 -14 2161 121 0 3 chr2 215752093 215752390 -37504193 - AluSx SINE Alu -14 298 3 2230 112 7 0 chr2 215752427 215752723 -37503860 + AluSx SINE Alu 2 299 -13 637 178 39 8 chr2 215752734 215752863 -37503720 + AluJb SINE Alu 2 134 -178 183 250 0 0 chr2 215753274 215753314 -37503269 - L2 LINE L2 -16 3297 3258 498 255 105 56 chr2 215753411 215753631 -37502952 + MIR SINE MIR 16 246 -16 1842 57 0 22 chr2 215753646 215753876 -37502707 + AluY SINE Alu 1 225 -86 1130 59 0 0 chr2 215753876 215754011 -37502572 + AluY SINE Alu 164 298 -13 368 287 0 0 chr2 215754413 215754528 -37502055 + L2 LINE L2 1896 2010 -1304 243 0 0 0 chr2 215754716 215754743 -37501840 + (A)n Simple_repeat Simple_repeat 1 27 0 2312 98 7 0 chr2 215754790 215755097 -37501486 + AluSx SINE Alu 1 309 -3 700 174 0 36 chr2 215755168 215755306 -37501277 + FLAM_C SINE Alu 1 133 0 2271 96 10 0 chr2 215755319 215755612 -37500971 + AluSg1 SINE Alu 1 296 -13 1935 176 0 0 chr2 215755726 215756027 -37500556 - AluJb SINE Alu -11 301 1 225 333 0 0 chr2 215756737 215756803 -37499780 + L2 LINE L2 3127 3192 -80 2637 43 13 0 chr2 215757280 215757585 -37498998 + AluY SINE Alu 1 309 -2 692 219 107 29 chr2 215757658 215757863 -37498720 - MIR SINE MIR -30 232 12 1936 152 6 19 chr2 215758125 215758441 -37498142 + AluJb SINE Alu 1 312 0 2417 78 3 0 chr2 215758679 215758974 -37497609 - AluSp SINE Alu -17 296 1 183 80 0 0 chr2 215760515 215760540 -37496043 + (A)n Simple_repeat Simple_repeat 1 25 0 188 184 20 0 chr2 215760820 215760869 -37495714 + (TA)n Simple_repeat Simple_repeat 2 51 0 321 26 0 0 chr2 215760891 215760929 -37495654 + (CA)n Simple_repeat Simple_repeat 2 39 0 222 254 0 0 chr2 215761868 215761935 -37494648 + (CCCG)n Simple_repeat Simple_repeat 1 67 0 28 91 0 0 chr2 215762322 215762399 -37494184 + GC_rich Low_complexity Low_complexity 1 77 0 22 0 0 0 chr2 215763706 215763728 -37492855 + AT_rich Low_complexity Low_complexity 1 22 0 2729 36 0 0 chr2 215764393 215764702 -37491881 - AluY SINE Alu -2 309 1 786 150 0 16 chr2 215764998 215765125 -37491458 + FLAM_C SINE Alu 13 137 -6 2248 100 3 0 chr2 215765321 215765610 -37490973 + AluSq SINE Alu 1 290 -23 885 110 55 0 chr2 215765673 215765800 -37490783 - AluSq/x SINE Alu -176 136 3 2041 88 70 0 chr2 215766434 215766707 -37489876 - AluSg SINE Alu -16 294 3 709 158 0 30 chr2 215766727 215766860 -37489723 - FLAM_C SINE Alu -4 139 11 1207 139 0 0 chr2 215766935 215767108 -37489475 - AluSc SINE Alu -5 304 132 1956 103 82 24 chr2 215767126 215767417 -37489166 + AluSx SINE Alu 1 308 -4 1005 144 12 12 chr2 215767698 215767858 -37488725 + FRAM SINE Alu 1 159 -17 2312 101 3 3 chr2 215767858 215768166 -37488417 + AluSg SINE Alu 1 308 -2 285 214 60 0 chr2 215768166 215768250 -37488333 - L1MC4 LINE L1 -1340 6702 6614 203 186 0 17 chr2 215768250 215768309 -37488274 + (TA)n Simple_repeat Simple_repeat 2 59 0 2355 104 0 3 chr2 215768421 215768730 -37487853 - AluSg SINE Alu -2 308 1 1195 135 0 0 chr2 215769533 215769703 -37486880 - AluSq SINE Alu -13 300 131 320 298 0 11 chr2 215770086 215770180 -37486403 + MIR SINE MIR 12 104 -158 2069 176 10 56 chr2 215770184 215770594 -37485989 - MSTD LTR MaLR -5 391 1 443 165 22 11 chr2 215770605 215770696 -37485887 + MIR SINE MIR 119 210 -52 895 102 34 0 chr2 215770709 215770827 -37485756 - AluY SINE Alu -189 122 1 964 130 0 7 chr2 215770950 215771088 -37485495 + AluJ SINE Alu 1 137 -175 1569 109 70 0 chr2 215771088 215771318 -37485265 + AluSx SINE Alu 31 276 -36 261 0 0 0 chr2 215771319 215771348 -37485235 + (CA)n Simple_repeat Simple_repeat 2 30 0 414 175 0 0 chr2 215771350 215771430 -37485153 + (TG)n Simple_repeat Simple_repeat 1 80 0 483 149 0 0 chr2 215771436 215771510 -37485073 + AluJ SINE Alu 144 217 -95 23 0 0 0 chr2 215771510 215771533 -37485050 + AT_rich Low_complexity Low_complexity 1 23 0 180 290 0 43 chr2 215771548 215771617 -37484966 - L2 LINE L2 -8 3305 3240 267 259 15 92 chr2 215771731 215771862 -37484721 + L2 LINE L2 3193 3313 0 2394 241 103 32 chr2 215773248 215773987 -37482596 - MER21B LTR ERV1 -54 809 19 331 232 43 0 chr2 215774012 215774081 -37482502 - MER21B LTR ERV1 -776 87 16 189 210 0 0 chr2 215774082 215774144 -37482439 + (TA)n Simple_repeat Simple_repeat 2 63 0 1094 176 5 5 chr2 215774242 215774429 -37482154 - MER47A DNA MER2_type -20 346 160 343 197 33 0 chr2 215774429 215774490 -37482093 + AluJ/FLAM SINE Alu 1 63 -239 2191 111 0 10 chr2 215774490 215774797 -37481786 + AluSx SINE Alu 1 304 -8 379 141 465 0 chr2 215774812 215774911 -37481672 + MER47A DNA MER2_type 1 145 -221 2252 78 10 3 chr2 215774912 215775206 -37481377 + AluY SINE Alu 1 296 -15 1384 147 90 47 chr2 215775209 215775488 -37481095 - AluJb SINE Alu -20 292 2 2219 79 32 0 chr2 215775555 215775835 -37480748 - AluSp SINE Alu -18 295 7 2187 95 10 3 chr2 215775862 215776156 -37480427 + AluSx SINE Alu 1 296 -16 236 106 12 200 chr2 215776404 215776445 -37480138 - L1MD3 LINE L1 -175 7820 7801 1867 158 10 3 chr2 215776445 215776742 -37479841 - AluJo SINE Alu -2 310 12 236 106 12 200 chr2 215776742 215776785 -37479798 - L1MD3 LINE L1 -194 7801 7752 * 869 163 153 10 chr2 215776758 215776967 -37479616 - L1MC4a LINE L1 -262 7546 7308 189 0 0 0 chr2 215776988 215777009 -37479574 + (TTTC)n Simple_repeat Simple_repeat 4 24 0 1710 190 7 0 chr2 215777033 215777343 -37479240 - AluJb SINE Alu 0 312 1 2228 203 86 19 chr2 215777349 215777932 -37478651 - MLT1D LTR MaLR 0 626 1 2041 123 7 23 chr2 215778042 215778342 -37478241 - AluSx SINE Alu -17 295 1 228 269 75 0 chr2 215778685 215778752 -37477831 - L2 LINE L2 0 3313 3242 1898 119 13 63 chr2 215778840 215779143 -37477440 - AluSx SINE Alu -14 298 11 746 177 23 0 chr2 215779368 215779498 -37477085 - FLAM_C SINE Alu 0 133 1 1948 122 54 0 chr2 215779532 215779811 -37476772 - AluSq SINE Alu -19 294 1 379 255 255 37 chr2 215779840 215780028 -37476555 - MIR SINE MIR 0 262 34 2390 96 0 3 chr2 215780545 215780848 -37475735 - AluSq SINE Alu -11 302 1 1013 132 0 0 chr2 215780849 215780985 -37475598 - AluJo SINE Alu -166 146 11 1575 192 51 0 chr2 215781198 215781474 -37475109 + AluJo SINE Alu 3 292 -20 870 127 0 0 chr2 215781478 215781596 -37474987 + FLAM_C SINE Alu 1 118 -25 22 70 0 0 chr2 215781787 215781830 -37474753 + AT_rich Low_complexity Low_complexity 1 43 0 2138 140 0 0 chr2 215781869 215782169 -37474414 - AluSx SINE Alu -12 300 1 2074 129 0 0 chr2 215782484 215782778 -37473805 + AluSg SINE Alu 1 294 -16 2519 27 0 27 chr2 215783138 215783437 -37473146 - AluY SINE Alu -20 291 1 2231 91 0 7 chr2 215783871 215784180 -37472403 - AluSx SINE Alu 0 308 2 2061 126 0 44 chr2 215784286 215784604 -37471979 - AluSx SINE Alu -8 304 1 329 222 22 22 chr2 215784656 215784746 -37471837 - L1MC4 LINE L1 -1339 6703 6614 2194 103 6 47 chr2 215784749 215785069 -37471514 - AluSq SINE Alu -6 307 1 2287 88 7 3 chr2 215785674 215785971 -37470612 - AluY SINE Alu -13 298 1 2052 149 13 4 chr2 215786001 215786312 -37470271 + AluJb SINE Alu 1 299 -13 1992 129 16 26 chr2 215786318 215786629 -37469954 + AluSx SINE Alu 5 312 0 239 190 17 0 chr2 215786633 215786691 -37469892 + GA-rich Low_complexity Low_complexity 3 61 0 189 0 0 0 chr2 215786694 215786715 -37469868 + (CAGG)n Simple_repeat Simple_repeat 4 24 0 2484 65 0 3 chr2 215786715 215787021 -37469562 + AluY SINE Alu 7 311 0 21 0 0 0 chr2 215787303 215787324 -37469259 + AT_rich Low_complexity Low_complexity 1 21 0 1718 148 9 102 chr2 215787595 215787729 -37468854 + AluJb SINE Alu 1 146 -156 2230 138 0 0 chr2 215787729 215788041 -37468542 + AluSx SINE Alu 1 312 0 1718 148 9 102 chr2 215788041 215788238 -37468345 + AluJb SINE Alu 146 301 -1 1894 170 0 10 chr2 215788413 215788713 -37467870 - AluJo SINE Alu -15 297 1 1695 234 48 79 chr2 215788806 215789387 -37467196 + MLT1G LTR MaLR 28 590 0 288 257 110 33 chr2 215789393 215789537 -37467046 + MLT1J LTR MaLR 59 175 -275 1372 239 11 0 chr2 215789621 215789905 -37466678 - LTR16A LTR ERVL 0 450 164 1012 224 93 114 chr2 215789934 215790506 -37466077 - MLT1F1 LTR MaLR 0 567 1 1218 141 0 0 chr2 215790537 215790707 -37465876 - AluSg/x SINE Alu -10 302 133 240 59 0 0 chr2 215790707 215790741 -37465842 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2219 85 7 7 chr2 215790741 215791023 -37465560 - AluSx SINE Alu -28 284 3 2152 102 35 0 chr2 215791073 215791356 -37465227 - AluSp SINE Alu -20 293 1 388 268 62 26 chr2 215791546 215791740 -37464843 - L1MC4a LINE L1 -1903 5905 5705 1100 97 86 17 chr2 215791752 215791927 -37464656 + MLT1A1-int LTR MaLR 1549 1735 0 896 186 152 65 chr2 215791927 215792217 -37464366 + MLT1A1 LTR MaLR 1 315 -50 1512 173 4 18 chr2 215793258 215793394 -37463189 + AluJb SINE Alu 1 133 -179 2246 105 13 10 chr2 215793394 215793699 -37462884 + AluSg SINE Alu 1 306 -4 1512 173 4 18 chr2 215793699 215793834 -37462749 + AluJb SINE Alu 133 268 -44 260 132 0 0 chr2 215793862 215793900 -37462683 + MLT1A1 LTR MaLR 346 383 -13 1715 110 0 4 chr2 215794091 215794327 -37462256 - AluSg1 SINE Alu -14 295 61 22 0 0 0 chr2 215794955 215794977 -37461606 + AT_rich Low_complexity Low_complexity 1 22 0 1883 141 0 14 chr2 215794998 215795275 -37461308 + AluJb SINE Alu 1 273 -39 1055 111 0 0 chr2 215795324 215795459 -37461124 + AluSq/x SINE Alu 1 135 -177 2127 122 3 3 chr2 215795459 215795763 -37460820 + AluSx SINE Alu 1 304 -8 361 191 15 118 chr2 215795858 215795994 -37460589 - MIR SINE MIR -17 245 124 2131 110 3 26 chr2 215796060 215796369 -37460214 - AluSx SINE Alu -10 302 1 2534 151 57 5 chr2 215796510 215796915 -37459668 + MSTB LTR MaLR 1 426 0 3151 141 29 18 chr2 215796916 215797476 -37459107 + MSTB-int LTR MaLR 5 570 -1081 486 221 21 0 chr2 215797483 215797578 -37459005 - FLAM_A SINE Alu -45 97 1 200 254 0 63 chr2 215797657 215797720 -37458863 + MIR SINE MIR 67 125 -137 1955 128 3 14 chr2 215798096 215798406 -37458177 - AluSx SINE Alu 0 307 1 777 209 0 8 chr2 215798792 215798926 -37457657 - AluJo SINE Alu -176 136 4 2332 109 0 3 chr2 215799001 215799312 -37457271 + AluSx SINE Alu 1 310 -2 2071 131 7 3 chr2 215799392 215799689 -37456894 - AluJb SINE Alu -14 298 1 25 31 0 0 chr2 215799693 215799725 -37456858 + AT_rich Low_complexity Low_complexity 1 32 0 611 258 96 25 chr2 215800130 215800370 -37456213 + MIR SINE MIR 6 262 0 21 0 0 0 chr2 215800376 215800397 -37456186 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 215800734 215800756 -37455827 + AT_rich Low_complexity Low_complexity 1 22 0 2244 89 0 3 chr2 215801212 215801519 -37455064 + AluY SINE Alu 1 306 0 415 165 25 0 chr2 215801569 215801648 -37454935 + L1MB8 LINE L1 6094 6174 -4 860 153 0 15 chr2 215801669 215801800 -37454783 - FLAM_C SINE Alu -4 129 1 1796 188 0 0 chr2 215801834 215802121 -37454462 + AluJb SINE Alu 1 287 -25 201 74 0 0 chr2 215802125 215802152 -37454431 + (CA)n Simple_repeat Simple_repeat 2 28 0 25 65 0 0 chr2 215802161 215802207 -37454376 + AT_rich Low_complexity Low_complexity 1 46 0 1438 123 0 0 chr2 215802324 215802527 -37454056 - L1PA14 LINE L1 -17 6144 5942 21 36 0 0 chr2 215802952 215802980 -37453603 + AT_rich Low_complexity Low_complexity 1 28 0 1843 145 59 3 chr2 215803906 215804196 -37452387 + AluSx SINE Alu 1 306 -6 560 148 0 23 chr2 215804214 215804302 -37452281 - FRAM SINE Alu -20 156 71 2390 76 0 3 chr2 215804831 215805120 -37451463 - AluY SINE Alu -23 288 1 2011 138 0 10 chr2 215805150 215805446 -37451137 + AluSx SINE Alu 1 293 -19 26 50 0 0 chr2 215805906 215805946 -37450637 + AT_rich Low_complexity Low_complexity 1 40 0 1773 158 4 0 chr2 215805946 215806212 -37450371 - AluJo SINE Alu -41 271 5 2352 101 0 0 chr2 215806248 215806545 -37450038 - AluSq SINE Alu -15 298 2 180 0 0 0 chr2 215807000 215807020 -37449563 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 2190 111 0 0 chr2 215807029 215807309 -37449274 - AluSx SINE Alu -32 280 1 589 283 88 60 chr2 215807802 215808179 -37448404 + L1ME4a LINE L1 5569 5967 -154 1915 140 0 20 chr2 215808179 215808310 -37448273 + AluSx SINE Alu 6 138 -174 2126 113 0 7 chr2 215808310 215808629 -37447954 + AluY SINE Alu 1 311 0 1915 140 0 20 chr2 215808629 215808797 -37447786 + AluSx SINE Alu 138 299 -13 589 283 88 60 chr2 215808797 215808956 -37447627 + L1ME4a LINE L1 5967 6120 -1 1546 152 76 43 chr2 215808956 215809258 -37447325 + AluJo SINE Alu 1 312 0 2017 123 3 7 chr2 215810350 215810654 -37445929 + AluSx SINE Alu 1 303 0 914 174 50 0 chr2 215811006 215811167 -37445416 + AluJb SINE Alu 1 169 -143 494 168 21 0 chr2 215811168 215811263 -37445320 + AluSg/x SINE Alu 212 308 -1 1538 192 4 7 chr2 215811350 215811626 -37444957 + AluJo SINE Alu 3 277 -35 1932 125 7 30 chr2 215811677 215811972 -37444611 - AluSx SINE Alu -16 296 9 2313 90 6 16 chr2 215812047 215812359 -37444224 + AluSc SINE Alu 1 309 0 22 70 0 0 chr2 215812437 215812480 -37444103 + AT_rich Low_complexity Low_complexity 1 43 0 2181 109 19 29 chr2 215812693 215813006 -37443577 - AluSg SINE Alu 0 310 1 2412 95 0 0 chr2 215813082 215813388 -37443195 - AluSx SINE Alu -6 306 1 2344 105 10 0 chr2 215813401 215813707 -37442876 - AluSp SINE Alu -4 309 1 234 294 50 42 chr2 215813748 215813867 -37442716 + HAL1b LINE L1 227 346 -1002 2049 84 18 22 chr2 215813874 215814148 -37442435 + AluSg SINE Alu 27 299 -11 526 211 115 48 chr2 215814215 215814424 -37442159 + HAL1b LINE L1 458 680 -668 615 239 165 39 chr2 215814458 215814743 -37441840 + HAL1b LINE L1 988 1308 -40 1983 102 35 18 chr2 215814750 215815035 -37441548 - AluSx SINE Alu -22 290 1 23 0 0 0 chr2 215815083 215815106 -37441477 + AT_rich Low_complexity Low_complexity 1 23 0 2131 130 3 13 chr2 215815488 215815803 -37440780 + AluSq SINE Alu 1 312 -1 2063 116 0 3 chr2 215815830 215816141 -37440442 - AluSx SINE Alu 0 310 1 22 70 0 0 chr2 215816141 215816184 -37440399 + AT_rich Low_complexity Low_complexity 1 43 0 452 212 102 17 chr2 215816338 215816456 -37440127 - MER94 DNA DNA -5 129 2 269 254 159 36 chr2 215816496 215816716 -37439867 + L1MC4 LINE L1 7529 7775 -267 1580 192 0 18 chr2 215816716 215816997 -37439586 + AluJo SINE Alu 1 276 -36 753 170 0 0 chr2 215816999 215817111 -37439472 + AluSc SINE Alu 122 233 -76 2289 99 7 0 chr2 215817140 215817433 -37439150 - AluSp SINE Alu -18 295 1 647 216 70 54 chr2 215817445 215817561 -37439022 + L1MC4 LINE L1 7798 7911 -131 230 79 0 26 chr2 215817561 215817599 -37438984 + (TA)n Simple_repeat Simple_repeat 1 37 0 647 216 70 54 chr2 215817599 215817723 -37438860 + L1MC4 LINE L1 7911 8042 0 838 150 8 16 chr2 215817790 215817917 -37438666 + AluJo/FLAM SINE Alu 3 128 -174 2334 63 40 0 chr2 215817917 215818216 -37438367 + AluY SINE Alu 1 311 0 42 20 0 0 chr2 215818216 215818265 -37438318 + AT_rich Low_complexity Low_complexity 1 49 0 912 88 0 0 chr2 215818265 215818379 -37438204 + AluY SINE Alu 1 114 -197 698 66 22 0 chr2 215818379 215818470 -37438113 + Alu SINE Alu 208 300 -10 21 57 0 0 chr2 215818536 215818571 -37438012 + AT_rich Low_complexity Low_complexity 1 35 0 2146 113 0 7 chr2 215818875 215819166 -37437417 - AluSx SINE Alu -20 292 4 1921 139 0 20 chr2 215819626 215819928 -37436655 + AluSq SINE Alu 3 298 -15 227 374 43 9 chr2 215820121 215820236 -37436347 + L2 LINE L2 2925 3043 -229 689 62 0 0 chr2 215820241 215820322 -37436261 - AluSg/x SINE Alu -17 295 215 237 298 111 89 chr2 215820323 215820548 -37436035 + L2 LINE L2 3038 3267 -5 525 119 0 0 chr2 215821193 215821260 -37435323 - AluJ/FLAM SINE Alu -244 68 2 644 164 48 0 chr2 215821842 215821946 -37434637 - AluJo SINE Alu -21 291 183 814 145 8 0 chr2 215821954 215822078 -37434505 - AluJo SINE Alu -186 126 2 378 127 9 0 chr2 215822139 215822198 -37434385 + L1MC4 LINE L1 6855 6990 -891 288 267 102 58 chr2 215822600 215822825 -37433758 + L1M4 LINE L1 954 1188 -5667 451 230 54 34 chr2 215822878 215823026 -37433557 + L1M4 LINE L1 1505 1655 -5204 339 325 82 5 chr2 215823036 215823230 -37433353 + L1ME LINE L1 5566 5774 -347 290 219 0 0 chr2 215823903 215823968 -37432615 - L1ME3A LINE L1 -3 6161 6095 2135 112 0 23 chr2 215824574 215824879 -37431704 - AluSx SINE Alu -14 298 1 604 68 0 0 chr2 215824987 215825061 -37431522 - FLAM_A SINE Alu -17 125 52 799 170 0 30 chr2 215825157 215825292 -37431291 + FLAM_C SINE Alu 1 131 -2 28 48 0 0 chr2 215825812 215825854 -37430729 + AT_rich Low_complexity Low_complexity 1 42 0 225 0 0 0 chr2 215826588 215826613 -37429970 + (A)n Simple_repeat Simple_repeat 1 25 0 279 0 0 0 chr2 215826678 215826709 -37429874 + (TCTA)n Simple_repeat Simple_repeat 2 32 0 247 274 147 10 chr2 215827220 215827322 -37429261 - L2 LINE L2 -4 3309 3194 180 321 152 62 chr2 215827324 215827436 -37429147 + L2 LINE L2 2220 2341 -973 2286 82 14 3 chr2 215828520 215828813 -37427770 - AluSg SINE Alu -12 298 3 2303 105 3 0 chr2 215829348 215829654 -37426929 - AluSx SINE Alu -1 311 5 1999 164 0 0 chr2 215829840 215830150 -37426433 - AluSx SINE Alu -2 310 1 199 315 43 11 chr2 215830450 215830542 -37426041 - MIR SINE MIR -63 145 67 1117 156 96 15 chr2 215830969 215831168 -37425415 + MER20 DNA MER1_type 1 215 -4 2200 117 3 3 chr2 215831267 215831576 -37425007 - AluSg SINE Alu -1 309 1 1785 123 11 131 chr2 215831578 215831751 -37424832 - AluYb8 SINE Alu 0 308 116 1974 126 10 7 chr2 215831751 215832069 -37424514 - AluY SINE Alu 0 311 1 1785 123 11 131 chr2 215832069 215832108 -37424475 - AluYb8 SINE Alu -192 116 74 1868 117 42 0 chr2 215832108 215832372 -37424211 - AluSx SINE Alu -37 275 1 1785 123 11 131 chr2 215832372 215832508 -37424075 - AluYb8 SINE Alu -234 74 1 2390 60 0 0 chr2 215832654 215832937 -37423646 + AluY SINE Alu 19 301 -10 1723 183 0 7 chr2 215832945 215833246 -37423337 + AluJo SINE Alu 1 299 -13 2036 115 25 0 chr2 215833626 215833904 -37422679 - AluSx SINE Alu -26 286 2 215 189 0 0 chr2 215834021 215834058 -37422525 + L2 LINE L2 3188 3224 -89 279 276 172 20 chr2 215834525 215834618 -37421965 + L2 LINE L2 2526 2604 -709 2476 50 3 0 chr2 215834618 215834916 -37421667 - AluY SINE Alu -12 299 1 279 276 172 20 chr2 215834916 215835126 -37421457 + L2 LINE L2 2604 3116 -197 1959 91 45 7 chr2 215838155 215838441 -37418142 + AluSg1 SINE Alu 1 297 -12 219 188 0 0 chr2 215838473 215838505 -37418078 + MIR SINE MIR 37 68 -194 1522 194 21 0 chr2 215839719 215840008 -37416575 + AluJb SINE Alu 1 295 -17 2183 115 0 0 chr2 215840591 215840895 -37415688 - AluSx SINE Alu -8 304 1 2175 97 0 3 chr2 215841496 215841794 -37414789 + AluY SINE Alu 1 297 -14 1890 96 89 0 chr2 215841999 215842270 -37414313 + AluSc SINE Alu 1 295 -14 832 52 139 0 chr2 215842271 215842386 -37414197 + AluSg SINE Alu 1 131 -179 380 239 28 42 chr2 215842441 215842617 -37413966 - L1ME LINE L1 -296 5825 5664 1929 109 3 3 chr2 215842628 215842934 -37413649 - AluSg SINE Alu 0 306 1 1804 155 26 7 chr2 215843095 215843399 -37413184 - AluJo SINE Alu -2 310 1 2124 114 0 0 chr2 215843923 215844220 -37412363 - AluSx SINE Alu -15 297 1 3851 108 2 6 chr2 215844599 215845119 -37411464 - THE1B-int LTR MaLR -704 876 359 848 81 122 8 chr2 215845119 215845242 -37411341 + THE1B LTR MaLR 1 137 -227 6819 92 21 8 chr2 215845266 215846174 -37410409 + THE1B-int LTR MaLR 344 1263 -317 1150 96 6 0 chr2 215846174 215846330 -37410253 - AluSp SINE Alu -156 157 1 756 62 54 0 chr2 215846330 215846442 -37410141 + THE1B-int LTR MaLR 1463 1580 0 2113 123 87 15 chr2 215846442 215846776 -37409807 + THE1B LTR MaLR 1 358 -6 2796 73 11 0 chr2 215846783 215847141 -37409442 - THE1B-int LTR MaLR -1218 362 1 1056 123 12 29 chr2 215847141 215847312 -37409271 - THE1B LTR MaLR 0 364 197 8839 38 13 185 chr2 215847635 215849248 -37407335 - SVA Other Other 0 1386 52 1220 0 0 49 chr2 215849252 215849496 -37407087 + (GGGAGA)n Simple_repeat Simple_repeat 1 231 0 1282 145 50 0 chr2 215849572 215849772 -37406811 - LTR47A LTR ERVL -38 414 205 743 144 22 29 chr2 215849998 215850137 -37406446 - L1PA16 LINE L1 0 6166 6029 2123 104 0 7 chr2 215850137 215850434 -37406149 - AluSg SINE Alu -15 295 1 2328 90 7 0 chr2 215850447 215850757 -37405826 - AluSx SINE Alu 0 312 1 1440 103 5 0 chr2 215850757 215850951 -37405632 - L1PA16 LINE L1 -229 5937 5743 861 264 171 34 chr2 215851001 215851479 -37405104 + MLT1H1 LTR MaLR 8 551 -4 2045 109 3 0 chr2 215851818 215852132 -37404451 - AluSp SINE Alu 0 315 1 1858 160 7 0 chr2 215853727 215854021 -37402562 - AluJb SINE Alu -15 297 2 1485 158 57 18 chr2 215854329 215854608 -37401975 + AluJo SINE Alu 1 290 -22 1720 147 3 49 chr2 215854951 215855284 -37401299 - AluSq SINE Alu 0 313 1 2375 87 3 0 chr2 215855398 215855710 -37400873 - AluSp SINE Alu 0 313 1 980 60 8 0 chr2 215855710 215855836 -37400747 - AluSc SINE Alu -5 304 175 1020 63 0 0 chr2 215855838 215855964 -37400619 - AluSc SINE Alu -183 126 1 206 333 44 0 chr2 215856337 215856427 -37400156 + L2 LINE L2 2966 3059 -213 33 43 0 0 chr2 215856436 215856483 -37400100 + AT_rich Low_complexity Low_complexity 1 47 0 225 237 263 0 chr2 215856483 215856559 -37400024 - MIR SINE MIR 0 262 167 726 164 0 0 chr2 215856562 215856678 -37399905 + FLAM_C SINE Alu 19 134 -9 320 184 0 79 chr2 215856698 215856774 -37399809 - Tigger2a DNA MER2_type 0 434 365 1615 197 3 0 chr2 215856774 215857069 -37399514 - AluJo SINE Alu -16 296 1 324 0 0 0 chr2 215857070 215857106 -37399477 + (TTA)n Simple_repeat Simple_repeat 2 37 0 1859 132 0 17 chr2 215857106 215857393 -37399190 - AluSx SINE Alu -28 284 3 1852 120 4 11 chr2 215857420 215857695 -37398888 - AluSx SINE Alu -39 273 1 685 188 8 0 chr2 215857701 215857818 -37398765 - FLAM_A SINE Alu -15 127 10 2211 139 5 46 chr2 215857830 215858006 -37398577 - Tigger2a DNA MER2_type -2336 372 190 2078 133 7 0 chr2 215858006 215858314 -37398269 + AluSq SINE Alu 1 310 -3 2211 139 5 46 chr2 215858314 215858525 -37398058 - Tigger2a DNA MER2_type -2518 190 1 498 299 28 14 chr2 215858525 215858669 -37397914 - MIR SINE MIR -105 157 12 382 335 112 0 chr2 215858696 215858857 -37397726 + L2 LINE L2 3132 3310 -3 1879 112 21 11 chr2 215858966 215859253 -37397330 - AluSg SINE Alu -20 290 1 2137 129 65 62 chr2 215860259 215860620 -37395963 - MLT1C LTR MaLR 0 467 103 2103 119 10 0 chr2 215860620 215860930 -37395653 - AluSq SINE Alu 0 313 1 2137 129 65 62 chr2 215860930 215861032 -37395551 - MLT1C LTR MaLR -364 103 3 1165 281 107 50 chr2 215861074 215861318 -37395265 - L2 LINE L2 0 3313 3084 180 0 0 0 chr2 215861318 215861338 -37395245 + (TTTC)n Simple_repeat Simple_repeat 2 21 0 1857 132 14 0 chr2 215861340 215861621 -37394962 - AluSx SINE Alu -27 285 1 1165 281 107 50 chr2 215861621 215862153 -37394430 - L2 LINE L2 -229 3084 2499 2249 85 7 0 chr2 215862453 215862746 -37393837 - AluY SINE Alu -16 295 1 544 94 0 35 chr2 215863124 215863209 -37393374 - AluJ/FRAM SINE Alu -11 301 220 769 168 0 8 chr2 215863241 215863372 -37393211 + FLAM_C SINE Alu 1 130 -3 1019 129 0 13 chr2 215863400 215863555 -37393028 + AluSq SINE Alu 1 153 -160 597 125 0 0 chr2 215863555 215863643 -37392940 + AluSc SINE Alu 215 302 -7 226 233 0 0 chr2 215864058 215864101 -37392482 + (CATA)n Simple_repeat Simple_repeat 4 46 0 1723 130 0 109 chr2 215864237 215864568 -37392015 - AluSx SINE Alu -16 296 2 2138 125 0 0 chr2 215865688 215866000 -37390583 + AluSx SINE Alu 1 312 0 201 365 42 21 chr2 215866686 215866878 -37389705 - L2 LINE L2 -574 2740 2545 790 289 37 12 chr2 215867422 215867664 -37388919 + MIR SINE MIR 8 255 -7 231 222 56 0 chr2 215867853 215867907 -37388676 + Charlie8 DNA MER1_type 1372 1428 -989 1634 159 3 29 chr2 215867996 215868173 -37388410 - AluJb SINE Alu -5 307 140 2241 85 0 13 chr2 215868173 215868478 -37388105 - AluSg SINE Alu -9 301 1 1634 159 3 29 chr2 215868478 215868614 -37387969 - AluJb SINE Alu -172 140 2 328 214 0 129 chr2 215868616 215868756 -37387827 - L1M4 LINE L1 -2929 3217 3096 528 200 109 9 chr2 215868756 215868900 -37387683 + FLAM_C SINE Alu 1 155 0 1711 178 17 7 chr2 215869118 215869411 -37387172 + MER2 DNA MER2_type 1 296 -49 1845 143 0 0 chr2 215869438 215869711 -37386872 - AluSx SINE Alu -16 296 24 1760 126 83 0 chr2 215870794 215871071 -37385512 - AluSx SINE Alu -12 300 1 2367 77 0 10 chr2 215871080 215871390 -37385193 - AluY SINE Alu -3 308 2 321 317 102 37 chr2 215871415 215871661 -37384922 + L3 LINE CR1 1004 1265 -312 2168 102 3 0 chr2 215872008 215872312 -37384271 + AluSp SINE Alu 1 305 -8 1903 125 11 0 chr2 215872428 215872748 -37383835 + AluSx SINE Alu 1 323 0 2173 86 0 7 chr2 215873242 215873543 -37383040 - AluSc SINE Alu -10 299 1 912 120 0 0 chr2 215874039 215874164 -37382419 - FLAM_C SINE Alu -18 125 1 323 152 109 17 chr2 215874444 215874569 -37382014 - MER96B DNA MER1_type? -238 179 4 282 315 54 23 chr2 215874618 215874748 -37381835 + MIR3 SINE MIR 14 147 -61 1941 116 10 23 chr2 215875450 215875753 -37380830 + AluSx SINE Alu 1 299 -13 1890 115 49 7 chr2 215875929 215876217 -37380366 - AluSx SINE Alu -12 300 1 2111 110 3 0 chr2 215876477 215876778 -37379805 + AluSq SINE Alu 1 302 -11 704 188 8 0 chr2 215876965 215877093 -37379490 - FLAM_A SINE Alu 0 133 5 1398 212 44 0 chr2 215877281 215877574 -37379009 - AluJo SINE Alu -6 306 1 1058 264 155 30 chr2 215877946 215878378 -37378205 + L3 LINE CR1 922 1407 -170 256 220 297 11 chr2 215878389 215878480 -37378103 - L2 LINE L2 -8 3305 3189 21 0 0 0 chr2 215878700 215878721 -37377862 + AT_rich Low_complexity Low_complexity 1 21 0 884 166 19 0 chr2 215878795 215878952 -37377631 - AluJb SINE Alu -10 302 143 2194 72 3 44 chr2 215879370 215879690 -37376893 + AluSx SINE Alu 1 307 -5 1166 230 99 18 chr2 215879746 215880089 -37376494 + MER21B LTR ERV1 198 568 -295 405 156 0 52 chr2 215880086 215880163 -37376420 - AluJo SINE Alu -114 188 116 * 307 238 12 0 chr2 215880313 215880397 -37376186 + MIR SINE MIR 167 251 -11 2571 33 0 7 chr2 215880406 215880710 -37375873 + AluY SINE Alu 1 302 -9 1140 129 0 6 chr2 215880882 215881060 -37375523 - AluSg/x SINE Alu 0 310 134 1660 139 24 31 chr2 215881704 215881992 -37374591 - AluJo SINE Alu -11 301 16 2237 70 3 0 chr2 215882024 215882334 -37374249 - AluSp SINE Alu 0 311 1 394 219 24 0 chr2 215883020 215883102 -37373481 + L2 LINE L2 3228 3311 -2 21 0 0 0 chr2 215883253 215883274 -37373309 + AT_rich Low_complexity Low_complexity 1 21 0 1936 114 38 7 chr2 215883485 215883775 -37372808 - AluSx SINE Alu -13 299 1 456 264 79 21 chr2 215883868 215884008 -37372575 - MIR SINE MIR 0 262 115 2080 127 10 0 chr2 215884065 215884373 -37372210 - AluSp SINE Alu 0 313 3 330 356 116 0 chr2 215884406 215884552 -37372031 + L2 LINE L2 3105 3267 -5 1460 175 34 7 chr2 215884594 215884885 -37371698 + AluJo SINE Alu 1 299 -13 1622 165 0 95 chr2 215884979 215885306 -37371277 - AluJo SINE Alu -6 296 1 245 200 0 0 chr2 215885335 215885385 -37371198 - MER116 DNA Mariner 0 80 31 1928 145 0 3 chr2 215885391 215885688 -37370895 + AluSx SINE Alu 1 296 -16 3136 89 19 40 chr2 215885705 215885974 -37370609 - L1PA11 LINE L1 -2 6172 5899 2567 48 0 0 chr2 215885974 215886283 -37370300 - AluY SINE Alu -2 309 1 1940 109 68 7 chr2 215886285 215886579 -37370004 - AluSx SINE Alu 0 312 1 3136 89 19 40 chr2 215886579 215886779 -37369804 - L1PA11 LINE L1 -276 5898 5710 2181 110 0 7 chr2 215886788 215887096 -37369487 - AluSp SINE Alu -7 306 1 1538 134 30 4 chr2 215887655 215887886 -37368697 - AluSg/x SINE Alu -7 305 69 240 211 0 0 chr2 215888066 215888123 -37368460 + A-rich Low_complexity Low_complexity 1 57 0 516 133 0 33 chr2 215888164 215888254 -37368329 - AluJ/FRAM SINE Alu -10 302 216 313 209 67 29 chr2 215888296 215888401 -37368182 + MER34 LTR ERV1 434 542 0 2370 104 0 0 chr2 215890181 215890489 -37366094 - AluSx SINE Alu -4 308 1 1913 84 54 8 chr2 215890501 215890762 -37365821 - AluSg SINE Alu -4 306 34 2551 55 3 10 chr2 215890950 215891260 -37365323 - AluY SINE Alu -3 308 1 238 300 0 0 chr2 215892226 215892286 -37364297 - MIR SINE MIR -185 77 18 24 0 0 0 chr2 215892475 215892499 -37364084 + AT_rich Low_complexity Low_complexity 1 24 0 2161 113 3 3 chr2 215892507 215892799 -37363784 + AluSx SINE Alu 1 292 -20 763 172 0 0 chr2 215892799 215892915 -37363668 - AluJo/FLAM SINE Alu -194 118 3 608 228 66 87 chr2 215894655 215894944 -37361639 + MER102b DNA MER1_type 11 293 -48 2509 198 51 96 chr2 215895213 215895941 -37360642 + MER97b DNA MER1_type? 10 769 -284 2287 115 0 0 chr2 215895941 215896237 -37360346 - AluSx SINE Alu -16 296 1 2509 198 51 96 chr2 215896237 215896261 -37360322 + MER97b DNA MER1_type? 769 793 -260 1666 147 14 18 chr2 215896261 215896540 -37360043 + AluJo SINE Alu 35 312 0 2509 198 51 96 chr2 215896540 215896676 -37359907 + MER97b DNA MER1_type? 793 859 -194 1417 194 75 0 chr2 215896909 215897187 -37359396 + AluJo SINE Alu 7 305 -7 336 242 63 11 chr2 215897212 215897307 -37359276 + MER97b DNA MER1_type? 954 1053 0 1020 176 99 150 chr2 215897334 215897651 -37358932 - MER34B LTR ERV1 0 565 290 923 115 4 179 chr2 215897651 215897885 -37358698 + 7SK RNA RNA 1 193 0 1020 176 99 150 chr2 215897885 215898162 -37358421 - MER34B LTR ERV1 -275 290 1 907 228 0 12 chr2 215898294 215898461 -37358122 - FAM SINE Alu -10 165 1 800 214 0 0 chr2 215898479 215898633 -37357950 - AluJb SINE Alu -1 311 158 2277 79 0 4 chr2 215898679 215898959 -37357624 - AluSc SINE Alu -30 279 1 541 200 42 0 chr2 215898962 215899082 -37357501 - L1MB2 LINE L1 -42 6129 6005 1794 166 59 0 chr2 215899088 215899377 -37357206 - AluJo SINE Alu -4 308 3 2147 98 31 3 chr2 215899387 215899673 -37356910 - AluSq SINE Alu -19 294 1 1985 165 0 9 chr2 215900027 215900342 -37356241 + AluJb SINE Alu 1 312 0 2452 85 3 0 chr2 215900382 215900688 -37355895 - AluSq SINE Alu -2 311 5 842 139 0 0 chr2 215900728 215900843 -37355740 + FLAM_C SINE Alu 6 120 -23 444 227 231 30 chr2 215900846 215901049 -37355534 - L1ME4a LINE L1 -79 6042 5799 206 368 0 0 chr2 215902128 215902223 -37354360 + (TATATG)n Simple_repeat Simple_repeat 3 97 0 978 196 0 0 chr2 215902320 215902483 -37354100 + FRAM SINE Alu 1 162 -14 296 294 91 45 chr2 215902495 215902804 -37353779 + L1MC4a LINE L1 6116 6438 -1370 31 68 0 0 chr2 215902941 215903000 -37353583 + AT_rich Low_complexity Low_complexity 1 59 0 1708 207 81 145 chr2 215903000 215903332 -37353251 + L1MC5 LINE L1 6503 6855 -1106 2258 104 0 0 chr2 215903332 215903621 -37352962 - AluSx SINE Alu -23 289 1 1708 207 81 145 chr2 215903621 215904642 -37351941 + L1MC5 LINE L1 6855 7777 -184 197 355 71 5 chr2 215904645 215904856 -37351727 - L2 LINE L2 -1283 2031 1807 2217 105 0 7 chr2 215904883 215905177 -37351406 - AluSx SINE Alu -18 294 3 2366 98 0 3 chr2 215905207 215905504 -37351079 + AluSp SINE Alu 1 296 -17 21 0 0 0 chr2 215905514 215905535 -37351048 + AT_rich Low_complexity Low_complexity 1 21 0 844 247 13 35 chr2 215905662 215905889 -37350694 + MLT1I LTR MaLR 188 409 0 225 0 0 0 chr2 215906248 215906273 -37350310 + (CTGGGG)n Simple_repeat Simple_repeat 1 25 0 333 185 0 0 chr2 215907354 215907419 -37349164 + CT-rich Low_complexity Low_complexity 3 67 0 1953 111 12 87 chr2 215907419 215907655 -37348928 - AluSx SINE Alu -3 309 104 2543 60 0 0 chr2 215907655 215907954 -37348629 - AluY SINE Alu -12 299 1 1953 111 12 87 chr2 215907954 215908051 -37348532 - AluSx SINE Alu -208 104 1 384 283 45 97 chr2 215908339 215908473 -37348110 + LTR16C LTR ERVL 197 336 -155 1443 99 19 0 chr2 215908473 215908686 -37347897 + L1MA5A LINE L1 6078 6294 -3 384 283 45 97 chr2 215908686 215908862 -37347721 + LTR16C LTR ERVL 336 491 0 2244 73 6 60 chr2 215909550 215909866 -37346717 - AluSq SINE Alu -14 299 1 1957 133 14 7 chr2 215910178 215910471 -37346112 + AluJb SINE Alu 1 295 -17 383 270 105 0 chr2 215910877 215911029 -37345554 + MIR SINE MIR 49 216 -46 1935 144 0 24 chr2 215911131 215911429 -37345154 - AluSx SINE Alu -21 291 1 1619 190 44 0 chr2 215911786 215912060 -37344523 - AluJo SINE Alu -26 286 1 266 246 18 0 chr2 215912124 215912181 -37344402 - LTR67 LTR ERVL -384 173 116 880 133 0 49 chr2 215912284 215912427 -37344156 - AluSq/x SINE Alu -177 136 1 2069 132 0 46 chr2 215913257 215913394 -37343189 + AluJo SINE Alu 1 143 -169 2190 114 0 0 chr2 215913394 215913713 -37342870 + AluSx SINE Alu 1 319 0 2069 132 0 46 chr2 215913713 215913899 -37342684 + AluJo SINE Alu 143 310 -2 450 94 31 0 chr2 215914180 215914244 -37342339 - MER58 DNA MER1_type 0 2420 2355 2068 135 27 3 chr2 215914248 215914544 -37342039 - MER1B DNA MER1_type 0 339 37 2337 95 0 0 chr2 215914635 215914930 -37341653 - AluSx SINE Alu -17 295 1 1997 112 33 13 chr2 215914930 215915235 -37341348 - L1M3 LINE L1 -387 5781 5471 1456 305 22 20 chr2 215915250 215915758 -37340825 - L1M3d LINE L1 -5380 511 3 208 272 66 73 chr2 215915773 215915909 -37340674 + MIR SINE MIR 70 204 -58 2472 86 0 0 chr2 215916095 215916397 -37340186 - AluSx SINE Alu -10 302 1 262 338 99 20 chr2 215917006 215917207 -37339376 + MIR SINE MIR 21 237 -25 198 100 0 60 chr2 215917308 215917344 -37339239 + (TTTC)n Simple_repeat Simple_repeat 2 36 -12 189 74 0 0 chr2 215917344 215917371 -37339212 + (CCTG)n Simple_repeat Simple_repeat 2 28 0 198 100 0 60 chr2 215917371 215917384 -37339199 + (TTTC)n Simple_repeat Simple_repeat 36 48 0 25 31 0 0 chr2 215917553 215917585 -37338998 + AT_rich Low_complexity Low_complexity 1 32 0 2276 95 3 10 chr2 215917586 215917881 -37338702 + AluSp SINE Alu 1 293 -20 2307 104 0 7 chr2 215918471 215918768 -37337815 + AluSq SINE Alu 1 295 -18 2216 101 21 0 chr2 215918776 215919064 -37337519 + AluSx SINE Alu 1 294 -18 1623 176 33 0 chr2 215919725 215919997 -37336586 - AluJo SINE Alu -31 281 1 266 233 0 70 chr2 215920735 215920821 -37335762 + MER116 DNA Mariner 1 80 0 21 36 0 0 chr2 215920828 215920856 -37335727 + AT_rich Low_complexity Low_complexity 1 28 0 1836 168 14 0 chr2 215920856 215921147 -37335436 + AluJo SINE Alu 3 297 -15 373 330 81 5 chr2 215921314 215921499 -37335084 - L2 LINE L2 -6 3266 3068 369 282 51 8 chr2 215921570 215921687 -37334896 + MIR SINE MIR 141 262 0 207 0 0 0 chr2 215921984 215922007 -37334576 + (A)n Simple_repeat Simple_repeat 1 23 0 2361 62 0 39 chr2 215922039 215922344 -37334239 + AluY SINE Alu 14 306 -5 383 326 84 34 chr2 215922497 215922736 -37333847 - L2 LINE L2 -2 3270 3020 2331 84 0 19 chr2 215922779 215923088 -37333495 - AluSg SINE Alu -7 303 1 2556 71 3 0 chr2 215924366 215924705 -37331878 + AluSp SINE Alu 2 341 0 234 273 23 53 chr2 215924813 215924945 -37331638 - MIR SINE MIR -16 246 119 2043 155 0 0 chr2 215925157 215925466 -37331117 - AluSx SINE Alu -3 309 1 1052 253 100 36 chr2 215925533 215925893 -37330690 - MER21B LTR ERV1 -105 758 376 1947 161 7 0 chr2 215925898 215926197 -37330386 - AluJb SINE Alu -10 302 2 1459 151 47 36 chr2 215926200 215926504 -37330079 - AluJo SINE Alu 0 307 1 2469 80 0 0 chr2 215926706 215927006 -37329577 - AluSq SINE Alu -13 300 1 2461 69 7 0 chr2 215927144 215927448 -37329135 - AluSc SINE Alu -3 306 1 2328 89 7 0 chr2 215928602 215928904 -37327679 - AluY SINE Alu -7 304 1 311 100 33 83 chr2 215929546 215929606 -37326977 - L1MC/D LINE L1 -2001 5784 5728 865 244 29 68 chr2 215930181 215930492 -37326091 - MER74A LTR ERVL -29 529 231 2678 45 0 0 chr2 215930516 215930824 -37325759 - AluY SINE Alu -3 308 1 895 211 44 13 chr2 215930960 215931187 -37325396 - L1MB2 LINE L1 -3 6168 5935 1711 157 44 20 chr2 215931215 215931509 -37325074 - AluJo SINE Alu -11 301 1 767 205 6 41 chr2 215931511 215931682 -37324901 - FRAM SINE Alu 0 166 2 702 175 7 45 chr2 215931734 215931888 -37324695 - L1MB2 LINE L1 -573 5598 5451 2227 116 3 3 chr2 215932174 215932476 -37324107 - AluSx SINE Alu -10 302 1 1145 156 0 0 chr2 215932525 215932698 -37323885 - FRAM SINE Alu 0 176 4 4452 142 37 82 chr2 215933497 215934062 -37322521 + MER54A LTR ERVL 2 591 -310 192 40 0 0 chr2 215934062 215934087 -37322496 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2047 113 0 11 chr2 215934088 215934371 -37322212 - AluSq SINE Alu -33 280 1 4452 142 37 82 chr2 215934371 215934745 -37321838 + MER54A LTR ERVL 590 901 0 1443 112 95 22 chr2 215934897 215935168 -37321415 + AluSc SINE Alu 33 320 0 1814 147 0 66 chr2 215935175 215935495 -37321088 + AluJb SINE Alu 1 299 -13 1651 158 10 40 chr2 215935544 215935847 -37320736 + AluJo SINE Alu 1 294 -18 446 213 7 113 chr2 215936428 215936578 -37320005 - 7SK RNA RNA 0 193 60 264 236 73 0 chr2 215936948 215937003 -37319580 - MER67B-int LTR ERV1 -4176 2625 2567 2226 96 0 0 chr2 215937852 215938132 -37318451 + AluSg SINE Alu 1 280 -30 849 86 0 0 chr2 215938027 215938132 -37318451 + AluSg/x SINE Alu 176 305 0 226 0 0 0 chr2 215938132 215938157 -37318426 + (TAAA)n Simple_repeat Simple_repeat 4 152 0 2336 110 0 0 chr2 215938536 215938844 -37317739 - AluSg SINE Alu 0 310 3 834 261 62 22 chr2 215939710 215940032 -37316551 - MER67B-int LTR ERV1 -4437 499 165 2179 123 0 3 chr2 215940071 215940379 -37316204 + AluSp SINE Alu 1 307 -6 785 168 43 16 chr2 215940527 215940712 -37315871 - MER67B LTR ERV1 -10 651 462 636 231 24 12 chr2 215940709 215940878 -37315705 + MER21B LTR ERV1 326 496 -367 * 1378 202 45 27 chr2 215941021 215941193 -37315390 - AluJb SINE Alu -13 299 118 192 97 0 0 chr2 215941193 215941224 -37315359 + (TTTTA)n Simple_repeat Simple_repeat 5 35 0 1378 202 45 27 chr2 215941224 215941343 -37315240 - AluJb SINE Alu -194 118 3 1189 167 16 15 chr2 215942584 215943009 -37313574 - MER67B LTR ERV1 -185 476 8 2315 88 7 3 chr2 215943436 215943742 -37312841 - AluSg SINE Alu -2 308 2 1443 239 36 36 chr2 215943755 215944228 -37312355 - MER74A LTR ERVL -85 473 1 2429 76 3 0 chr2 215944448 215944750 -37311833 - AluSp SINE Alu -10 303 1 314 262 14 112 chr2 215945278 215945338 -37311245 - HAL1 LINE L1 -89 2418 2354 1561 161 32 25 chr2 215945338 215945623 -37310960 + AluJo SINE Alu 3 289 -23 314 262 14 112 chr2 215945623 215945776 -37310807 - HAL1 LINE L1 -153 2354 2226 2323 74 6 29 chr2 215945876 215946201 -37310382 - AluSx SINE Alu 0 325 8 207 0 0 0 chr2 215946201 215946224 -37310359 + (TCCCC)n Simple_repeat Simple_repeat 1 23 0 920 181 25 0 chr2 215946272 215946432 -37310151 - FRAM SINE Alu -2 164 1 2343 92 0 0 chr2 215946437 215946732 -37309851 - AluSc SINE Alu -14 295 1 2029 135 3 3 chr2 215946900 215947204 -37309379 - AluSx SINE Alu -8 304 1 1091 225 65 88 chr2 215947896 215947944 -37308639 - HsTC2a DNA Tc2 -1227 673 625 1956 160 6 6 chr2 215947944 215948256 -37308327 - AluJb SINE Alu 0 312 1 1091 225 65 88 chr2 215948256 215948402 -37308181 - HsTC2a DNA Tc2 -1275 625 477 2184 94 0 14 chr2 215948402 215948729 -37307854 - AluSx SINE Alu 0 323 1 1091 225 65 88 chr2 215948729 215948828 -37307755 - HsTC2a DNA Tc2 -1423 477 377 1961 152 0 16 chr2 215948828 215949144 -37307439 + AluJb SINE Alu 1 311 -1 1091 225 65 88 chr2 215949144 215949494 -37307089 - HsTC2a DNA Tc2 -1523 377 146 579 219 98 11 chr2 215949675 215949858 -37306725 - HsTC2a DNA Tc2 -543 201 3 492 254 49 7 chr2 215950464 215950606 -37305977 + MIR SINE MIR 101 248 -14 205 195 24 0 chr2 215950904 215950945 -37305638 + (TGGG)n Simple_repeat Simple_repeat 2 43 0 52 41 0 0 chr2 215951288 215951361 -37305222 + GC_rich Low_complexity Low_complexity 1 73 0 412 199 128 21 chr2 215952378 215952519 -37304064 - MER112 DNA MER1_type -6 254 99 527 226 98 25 chr2 215952539 215952743 -37303840 - MER112 DNA MER1_type -40 220 2 620 319 46 8 chr2 215952927 215953168 -37303415 + MIR SINE MIR 13 262 0 21 71 0 0 chr2 215953809 215953851 -37302732 + AT_rich Low_complexity Low_complexity 1 42 0 195 162 0 0 chr2 215954304 215954341 -37302242 + T-rich Low_complexity Low_complexity 5 41 0 22 70 0 0 chr2 215954554 215954597 -37301986 + AT_rich Low_complexity Low_complexity 1 43 0 21 36 0 0 chr2 215955929 215955957 -37300626 + AT_rich Low_complexity Low_complexity 1 28 0 23 54 0 0 chr2 215956045 215956082 -37300501 + AT_rich Low_complexity Low_complexity 1 37 0 1956 147 0 0 chr2 215956125 215956440 -37300143 - AluSx SINE Alu 0 315 1 206 304 11 54 chr2 215956476 215956568 -37300015 - MER5B DNA MER1_type -62 116 29 22 56 0 0 chr2 215957288 215957324 -37299259 + AT_rich Low_complexity Low_complexity 1 36 0 262 293 27 0 chr2 215957343 215957418 -37299165 + MER5B DNA MER1_type 13 89 -89 987 298 108 14 chr2 215958323 215958758 -37297825 - L2 LINE L2 0 3313 2810 433 188 0 20 chr2 215958758 215958859 -37297724 - L1PA16 LINE L1 -11 6155 6057 987 298 108 14 chr2 215958859 215959017 -37297566 - L2 LINE L2 -503 2810 2668 4015 167 89 13 chr2 215959042 215959698 -37296885 - L1MB7 LINE L1 -17 6167 5562 236 0 67 22 chr2 215959698 215959743 -37296840 + (TTG)n Simple_repeat Simple_repeat 2 48 0 4015 167 89 13 chr2 215959743 215960005 -37296578 - L1MB7 LINE L1 -622 5562 5321 1843 172 3 0 chr2 215960005 215960295 -37296288 - AluJb SINE Alu -21 291 1 4015 167 89 13 chr2 215960295 215960518 -37296065 - L1MB7 LINE L1 -863 5321 4941 201 39 0 0 chr2 215960600 215960626 -37295957 + (TATG)n Simple_repeat Simple_repeat 2 27 0 1796 130 14 35 chr2 215960653 215961000 -37295583 - L1MA5 LINE L1 -22 7299 6960 3105 146 21 32 chr2 215961001 215961078 -37295505 - L1MA5 LINE L1 -464 6857 6781 2296 95 0 0 chr2 215961078 215961361 -37295222 - AluSx SINE Alu -29 283 1 3105 146 21 32 chr2 215961361 215962332 -37294251 - L1MA5 LINE L1 -540 6781 5824 2730 189 51 38 chr2 215962319 215962912 -37293671 - L1MA5 LINE L1 -3277 3890 3281 * 552 244 9 0 chr2 215962912 215963027 -37293556 - FLAM_A SINE Alu -17 116 1 2730 189 51 38 chr2 215963027 215963274 -37293309 - L1MA5 LINE L1 -3886 3281 3039 1037 160 11 0 chr2 215963286 215963461 -37293122 - L1MA5 LINE L1 -5527 1641 1465 * 9974 182 54 40 chr2 215963459 215966380 -37290203 - L1M2 LINE L1 -4142 3026 57 3688 208 27 10 chr2 215966381 215967309 -37289274 - L1M4 LINE L1 -1188 4958 4015 408 184 61 9 chr2 215967312 215967426 -37289157 - L1M4 LINE L1 -2175 3971 3852 288 185 0 0 chr2 215967426 215967480 -37289103 - MLT1A2 LTR MaLR -1 373 320 2099 108 13 0 chr2 215967481 215967786 -37288797 - MER1B DNA MER1_type 0 339 31 638 278 73 5 chr2 215967788 215967993 -37288590 - MLT1A2 LTR MaLR -155 219 1 582 196 0 43 chr2 215967994 215968147 -37288436 - L1M4 LINE L1 -2290 3856 3710 665 291 13 4 chr2 215968228 215968462 -37288121 + L1ME3A LINE L1 1575 1810 -4586 2223 262 113 17 chr2 215968836 215970711 -37285872 + L1ME3A LINE L1 4178 6237 -2 2549 111 10 10 chr2 215970820 215971216 -37285367 - L1PA16 LINE L1 -9 6157 5762 307 284 123 119 chr2 215971575 215971683 -37284900 + MIR SINE MIR 3 109 -153 2160 119 0 31 chr2 215971683 215972003 -37284580 - AluSx SINE Alu -2 310 1 307 284 123 119 chr2 215972003 215972137 -37284446 + MIR SINE MIR 109 246 -16 2417 141 150 6 chr2 215972477 215972958 -37283625 + MER44D DNA MER2_type 1 605 0 253 81 0 0 chr2 215973131 215973168 -37283415 - tRNA-Leu-CTA tRNA tRNA -48 37 1 411 333 86 6 chr2 215973195 215973546 -37283037 - L1ME4a LINE L1 -267 5854 5476 2323 98 0 3 chr2 215974004 215974309 -37282274 - AluSp SINE Alu -8 305 2 23 0 0 0 chr2 215974504 215974527 -37282056 + AT_rich Low_complexity Low_complexity 1 23 0 2158 128 0 10 chr2 215974843 215975155 -37281428 - AluSx SINE Alu -3 309 1 1000 132 0 0 chr2 215975207 215975351 -37281232 - AluSg/x SINE Alu -9 303 160 2003 127 43 35 chr2 215975677 215976046 -37280537 - MER4E LTR ERV1 -63 716 345 6059 42 1 25 chr2 215976067 215976821 -37279762 - SVA Other Other 0 1386 651 1288 155 54 24 chr2 215977004 215977340 -37279243 - SVA Other Other -588 798 453 1454 82 0 10 chr2 215977349 215977555 -37279028 - MER4B LTR ERV1 -406 204 1 2070 147 0 3 chr2 215978901 215979208 -37277375 - AluJb SINE Alu -6 306 1 256 202 22 45 chr2 215979397 215979486 -37277097 - MER34 LTR ERV1 -6 536 450 313 267 9 19 chr2 215980041 215980146 -37276437 - MLT1K LTR MaLR -7 581 478 406 316 99 6 chr2 215980309 215980480 -37276103 - MLT1K LTR MaLR -369 219 33 525 238 24 48 chr2 215982687 215982855 -37273728 + MIR SINE MIR 99 262 0 641 249 102 100 chr2 215982860 215983321 -37273262 + L1MC4a LINE L1 5485 5946 -1862 270 317 104 61 chr2 215983668 215983832 -37272751 - L2 LINE L2 0 3272 3102 857 171 58 90 chr2 215983859 215984169 -37272414 + L1MC3 LINE L1 7459 7758 -27 1741 178 4 4 chr2 215984789 215985064 -37271519 + AluJo SINE Alu 1 275 -37 23 68 0 0 chr2 215985119 215985163 -37271420 + AT_rich Low_complexity Low_complexity 1 44 0 324 302 11 71 chr2 215985633 215985815 -37270768 + L1ME LINE L1 4961 5131 -1015 371 304 75 26 chr2 215985885 215986200 -37270383 + L1ME LINE L1 5287 5621 -500 * 1915 224 31 27 chr2 215986191 215986827 -37269756 + L1MC4a LINE L1 6934 7608 -200 22 70 0 0 chr2 215992217 215992260 -37264323 + AT_rich Low_complexity Low_complexity 1 43 0 237 321 164 18 chr2 215992490 215992655 -37263928 - L3b LINE CR1 -59 1524 1336 2179 122 0 3 chr2 215992908 215993219 -37263364 - AluSg SINE Alu 0 310 1 22 0 0 0 chr2 215994300 215994322 -37262261 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr2 215994800 215994831 -37261752 + AT_rich Low_complexity Low_complexity 1 31 0 2390 93 3 0 chr2 215995407 215995709 -37260874 - AluSx SINE Alu -9 303 1 266 115 58 0 chr2 215995880 215995932 -37260651 + MER41-int LTR ERV1 1 55 -5891 469 81 0 92 chr2 215996029 215996116 -37260467 - MADE1 DNA Mariner -1 79 1 7166 53 0 4 chr2 215996685 215997711 -37258872 - L1PA6 LINE L1 -2 6152 5128 22116 61 5 1 chr2 216000554 216003584 -37252999 - L1PA6 LINE L1 -1003 5143 2101 1495 99 28 95 chr2 216003684 216004220 -37252363 - SVA Other Other -457 929 430 1323 92 12 59 chr2 216004233 216004571 -37252012 - SVA Other Other -520 866 545 5158 62 63 46 chr2 216004585 216005411 -37251172 - SVA Other Other -520 866 27 1099 102 0 0 chr2 216005411 216005548 -37251035 - AluSq/x SINE Alu -176 137 1 277 246 34 119 chr2 216005564 216005682 -37250901 - MIR SINE MIR -150 112 5 2448 144 21 0 chr2 216005734 216006157 -37250426 - L1MA5 LINE L1 -349 5951 5520 * 3668 163 14 6 chr2 216006145 216006850 -37249733 + L1 LINE L1 3494 4204 -1942 3696 154 4 10 chr2 216006864 216007552 -37249031 + L1 LINE L1 4411 5094 -1052 309 89 0 0 chr2 216007827 216007872 -37248711 + (TC)n Simple_repeat Simple_repeat 2 46 0 550 212 22 106 chr2 216008563 216008680 -37247903 + MER5B DNA MER1_type 13 113 -65 2247 99 0 0 chr2 216008680 216009013 -37247570 - AluSx SINE Alu 0 333 1 550 212 22 106 chr2 216009013 216009073 -37247510 + MER5B DNA MER1_type 113 176 -2 374 182 78 0 chr2 216009191 216009268 -37247315 + MER82 DNA MER2_type 3 85 -568 348 280 74 32 chr2 216009331 216009520 -37247063 - MIR SINE MIR -57 205 9 733 201 65 38 chr2 216009558 216009742 -37246841 + MER82 DNA MER2_type 445 633 -20 456 310 46 29 chr2 216009947 216010121 -37246462 + MER5A DNA MER1_type 7 183 -6 361 331 41 7 chr2 216010143 216010288 -37246295 + HAL1 LINE L1 1613 1762 -745 221 238 0 38 chr2 216010348 216010428 -37246155 + A-rich Low_complexity Low_complexity 2 78 0 3463 204 38 112 chr2 216010430 216011405 -37245178 + MER4D LTR ERV1 1 903 0 510 254 0 35 chr2 216011721 216011863 -37244720 - LTR40a LTR ERVL -16 503 367 317 188 68 120 chr2 216011863 216011981 -37244602 - MER34 LTR ERV1 0 780 450 938 134 7 0 chr2 216012416 216012565 -37244018 - LTR40c LTR ERVL -295 170 21 305 270 37 6 chr2 216012765 216012928 -37243655 - Charlie7 DNA MER1_type -28 2584 2417 341 336 65 8 chr2 216013068 216013330 -37243253 - L1MC/D LINE L1 -2094 5714 5438 2158 127 3 0 chr2 216013336 216013635 -37242948 + AluSx SINE Alu 1 300 -12 970 34 54 0 chr2 216013654 216013802 -37242781 + (TTTC)n Simple_repeat Simple_repeat 2 157 0 548 194 5 38 chr2 216013805 216013991 -37242592 + CT-rich Low_complexity Low_complexity 1 180 0 1475 196 79 0 chr2 216014020 216014286 -37242297 - AluJb SINE Alu -25 287 1 403 39 0 0 chr2 216014370 216014421 -37242162 - AluSx SINE Alu -15 297 247 1556 115 0 5 chr2 216014425 216014633 -37241950 - AluSx SINE Alu -105 207 1 401 301 15 29 chr2 216014864 216015000 -37241583 + MIR SINE MIR 6 139 -123 275 313 20 30 chr2 216015261 216015360 -37241223 + MIR SINE MIR 5 102 -160 1831 155 7 0 chr2 216015403 216015681 -37240902 - AluSx SINE Alu -32 280 1 411 304 74 14 chr2 216015691 216015839 -37240744 + MIR SINE MIR 106 262 0 1013 167 0 6 chr2 216015841 216015997 -37240586 + FAM SINE Alu 13 167 -18 213 226 0 19 chr2 216017007 216017060 -37239523 + MIR3 SINE MIR 121 172 -36 2221 211 14 18 chr2 216017143 216017641 -37238942 + LTR31 LTR ERV1 109 604 -15 325 138 52 0 chr2 216018003 216018061 -37238522 + L1 LINE L1 3888 3948 -2198 981 294 84 19 chr2 216018524 216018892 -37237691 - L2 LINE L2 -1 3312 2921 1065 224 4 4 chr2 216019016 216019257 -37237326 + MER96B DNA MER1_type? 2 242 -175 562 186 0 0 chr2 216019264 216019366 -37237217 - L1 LINE L1 -1927 4219 4118 1492 116 40 29 chr2 216019370 216019645 -37236938 - L1MA7 LINE L1 -238 6053 5776 418 200 36 0 chr2 216019645 216019755 -37236828 + (CATATA)n Simple_repeat Simple_repeat 4 117 0 251 219 0 62 chr2 216019755 216019851 -37236732 - L1MC4 LINE L1 -1339 6703 6614 367 156 0 42 chr2 216019858 216019954 -37236629 + (CATATA)n Simple_repeat Simple_repeat 3 94 0 1543 68 14 23 chr2 216020061 216020280 -37236303 + AluY SINE Alu 91 307 -4 448 281 30 0 chr2 216020469 216020604 -37235979 - MIR SINE MIR -10 252 114 831 176 59 5 chr2 216020615 216020819 -37235764 - L1MB8 LINE L1 -164 6014 5800 598 242 145 5 chr2 216021263 216021499 -37235084 - L1MC4 LINE L1 -95 7713 7457 212 293 73 0 chr2 216021792 216021874 -37234709 - L2 LINE L2 -2 3270 3183 2895 190 31 90 chr2 216023689 216024423 -37232160 + L1M4 LINE L1 497 1272 -5270 1228 212 137 4 chr2 216024423 216024678 -37231905 + AluSx SINE Alu 1 289 -23 2895 190 31 90 chr2 216024678 216024801 -37231782 + L1M4 LINE L1 1272 1303 -5239 7671 20 4 1 chr2 216024801 216026120 -37230463 + L1PA3 LINE L1 4834 6155 0 2895 190 31 90 chr2 216026120 216026150 -37230433 + L1M4 LINE L1 1303 1333 -5209 21 36 0 0 chr2 216026151 216026179 -37230404 + AT_rich Low_complexity Low_complexity 1 28 0 236 311 107 40 chr2 216026283 216026408 -37230175 + L2 LINE L2 3117 3259 -54 1876 127 98 17 chr2 216026408 216026755 -37229828 - THE1C LTR MaLR 0 375 1 236 311 107 40 chr2 216026755 216026806 -37229777 + L2 LINE L2 3259 3305 -8 5082 127 47 16 chr2 216026848 216027455 -37229128 - Tigger3b DNA MER2_type -2062 966 318 2259 121 0 0 chr2 216027455 216027761 -37228822 + AluSx SINE Alu 1 306 -6 5082 127 47 16 chr2 216027761 216028090 -37228493 - Tigger3b DNA MER2_type -2710 318 1 1943 207 119 12 chr2 216028360 216028862 -37227721 + REP3 LTR ERV 3 558 -4 27 73 0 0 chr2 216029151 216029206 -37227377 + AT_rich Low_complexity Low_complexity 1 55 0 1343 167 90 10 chr2 216029233 216029550 -37227033 + L1MB7 LINE L1 5818 6161 -23 676 213 102 33 chr2 216029588 216029832 -37226751 - MLT1C LTR MaLR 0 467 207 249 33 0 0 chr2 216029832 216029862 -37226721 + (TG)n Simple_repeat Simple_repeat 2 31 0 220 298 12 12 chr2 216030488 216030572 -37226011 + (CATATA)n Simple_repeat Simple_repeat 6 89 0 4650 147 9 29 chr2 216030581 216030749 -37225834 - L1M2 LINE L1 -546 5766 5596 2041 118 27 7 chr2 216030749 216031046 -37225537 - AluSx SINE Alu -9 303 1 4650 147 9 29 chr2 216031046 216032204 -37224379 - L1M2 LINE L1 -716 5596 4467 2090 162 74 11 chr2 216032202 216032885 -37223698 - L1M4 LINE L1 -3639 2743 2019 * 203 253 0 66 chr2 216032886 216033068 -37223515 + (TTATA)n Simple_repeat Simple_repeat 1 170 0 238 262 5 63 chr2 216033076 216033267 -37223316 + (TATAA)n Simple_repeat Simple_repeat 1 180 0 10784 142 19 22 chr2 216033284 216035276 -37221307 - L1M4 LINE L1 -4384 2000 15 2243 91 0 10 chr2 216035296 216035592 -37220991 + AluY SINE Alu 1 293 -18 563 223 74 0 chr2 216035620 216035741 -37220842 + FLAM_A SINE Alu 7 136 -6 2016 156 0 13 chr2 216035758 216036072 -37220511 + AluSx SINE Alu 1 310 -2 635 202 65 0 chr2 216036126 216036250 -37220333 - FLAM_C SINE Alu 0 133 2 232 227 0 0 chr2 216038523 216038567 -37218016 + L1ME2 LINE L1 35 78 -6318 3035 258 73 23 chr2 216038582 216039850 -37216733 + L1ME2 LINE L1 296 1627 -4769 2228 210 94 9 chr2 216039865 216040398 -37216185 + L1MB8 LINE L1 5599 6176 -2 2050 201 112 47 chr2 216040403 216040584 -37215999 + L1ME2 LINE L1 1631 1799 -4597 1906 164 0 13 chr2 216040584 216040888 -37215695 - AluJb SINE Alu -12 300 1 2050 201 112 47 chr2 216040888 216040910 -37215673 + L1ME2 LINE L1 1799 1818 -4578 2309 105 3 13 chr2 216040910 216041224 -37215359 - AluSp SINE Alu -2 311 1 2050 201 112 47 chr2 216041224 216041670 -37214913 + L1ME2 LINE L1 1818 2333 -4063 2109 173 29 12 chr2 216041670 216042012 -37214571 - MER7A DNA MER2_type 0 346 1 2050 201 112 47 chr2 216042012 216042063 -37214520 + L1ME2 LINE L1 2333 2379 -4017 631 265 68 11 chr2 216042063 216042374 -37214209 + MLT2F LTR ERVL 1 374 -289 6612 234 63 34 chr2 216042377 216044163 -37212420 + L1ME2 LINE L1 3139 4872 -1361 2058 141 0 3 chr2 216044163 216044461 -37212122 + AluJb SINE Alu 5 301 -11 6612 234 63 34 chr2 216044461 216045235 -37211348 + L1ME2 LINE L1 4872 5800 -433 2159 116 7 0 chr2 216045235 216045536 -37211047 + AluSq SINE Alu 1 303 -10 6612 234 63 34 chr2 216045536 216045837 -37210746 + L1ME2 LINE L1 5800 6091 -142 711 198 31 6 chr2 216045845 216046007 -37210576 + L1MA10 LINE L1 6169 6334 0 3417 220 83 19 chr2 216046125 216046979 -37209604 + L1MC4 LINE L1 6489 7397 -645 1689 193 38 33 chr2 216046980 216047044 -37209539 - LTR52 LTR ERVL -15 406 344 321 26 0 0 chr2 216047044 216047082 -37209501 + (CA)n Simple_repeat Simple_repeat 2 39 0 1689 193 38 33 chr2 216047082 216047411 -37209172 - LTR52 LTR ERVL -77 344 11 684 222 53 37 chr2 216047412 216047532 -37209051 + L1MC4 LINE L1 7393 7519 -523 3264 171 35 0 chr2 216047532 216048075 -37208508 + MER68 LTR ERV1 1 562 0 684 222 53 37 chr2 216048075 216048143 -37208440 + L1MC4 LINE L1 7519 7584 -458 270 284 54 0 chr2 216048169 216048243 -37208340 + L1MC4 LINE L1 7665 7742 -300 * 340 282 0 0 chr2 216048237 216048315 -37208268 + L1MC4a LINE L1 7730 7807 -1 1670 175 10 26 chr2 216048321 216048630 -37207953 - AluJo SINE Alu -8 304 1 237 246 29 29 chr2 216048653 216048722 -37207861 - L1ME LINE L1 -288 5833 5765 594 307 11 23 chr2 216048723 216048899 -37207684 - MER5B DNA MER1_type -1 177 4 374 259 176 18 chr2 216048923 216049093 -37207490 - L1ME LINE L1 -352 5769 5573 225 250 73 0 chr2 216049332 216049428 -37207155 - L1ME LINE L1 -886 5260 5158 218 31 0 31 chr2 216050802 216050834 -37205749 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 879 243 78 4 chr2 216051037 216051280 -37205303 + MIR SINE MIR 2 262 0 369 169 0 0 chr2 216051323 216051382 -37205201 + AluJ/FRAM SINE Alu 221 279 -23 2462 103 47 36 chr2 216051418 216051778 -37204805 + THE1B LTR MaLR 1 364 0 3000 61 33 23 chr2 216051789 216051925 -37204658 + THE1-int LTR MaLR 1142 1275 -305 1801 144 3 14 chr2 216051925 216052233 -37204350 + AluSx SINE Alu 1 305 0 3000 61 33 23 chr2 216052233 216052491 -37204092 + THE1-int LTR MaLR 1275 1541 -39 1229 122 14 56 chr2 216052491 216052704 -37203879 + THE1B LTR MaLR 161 364 0 264 230 101 90 chr2 216052798 216052976 -37203607 - L1ME1 LINE L1 -177 5987 5805 742 285 117 44 chr2 216052994 216053575 -37203008 - L1ME1 LINE L1 -448 5722 5086 799 166 72 0 chr2 216054048 216054187 -37202396 + AluJb SINE Alu 131 279 -33 1074 32 0 0 chr2 216054286 216054409 -37202174 + L1PA4 LINE L1 6030 6152 -3 596 249 31 53 chr2 216056373 216056598 -37199985 - L2 LINE L2 0 3313 3094 1420 90 48 0 chr2 216056692 216056880 -37199703 + L1PA10 LINE L1 5971 6167 -1 1868 159 0 3 chr2 216057278 216057580 -37199003 - AluJo SINE Alu -11 301 1 571 235 33 20 chr2 216057591 216057744 -37198839 + L2 LINE L2 3159 3313 0 718 288 16 54 chr2 216057910 216058226 -37198357 - LTR16B LTR ERVL -1 463 160 1300 312 28 19 chr2 216058412 216058891 -37197692 - HERVL LTR ERVL -1099 4555 4133 2110 135 3 0 chr2 216058931 216059228 -37197355 - AluSx SINE Alu -14 298 1 3522 278 98 29 chr2 216059880 216060251 -37196332 - HERVL LTR ERVL -3569 1427 1083 1943 106 91 4 chr2 216060251 216060525 -37196058 + AluSx SINE Alu 1 298 -14 3522 278 98 29 chr2 216060525 216061487 -37195096 - HERVL LTR ERVL -3913 1083 2 264 312 98 42 chr2 216061493 216061832 -37194751 - LTR16B LTR ERVL -6 458 58 1999 87 16 0 chr2 216061885 216062139 -37194444 - L1PA8 LINE L1 0 6172 5915 1025 185 120 74 chr2 216062223 216062395 -37194188 + MLT1C LTR MaLR 1 164 -303 2542 61 0 0 chr2 216062395 216062706 -37193877 + AluY SINE Alu 1 311 0 1025 185 120 74 chr2 216062706 216062724 -37193859 + MLT1C LTR MaLR 164 180 -287 333 118 0 0 chr2 216062724 216062775 -37193808 + (CA)n Simple_repeat Simple_repeat 2 52 0 1025 185 120 74 chr2 216062775 216063018 -37193565 + MLT1C LTR MaLR 180 467 0 22 35 0 0 chr2 216063023 216063052 -37193531 + AT_rich Low_complexity Low_complexity 1 29 0 1937 182 34 30 chr2 216063056 216063299 -37193284 - L1MB7 LINE L1 -23 6161 5916 2184 129 3 0 chr2 216063299 216063602 -37192981 + AluSx SINE Alu 2 305 -7 1937 182 34 30 chr2 216063602 216063791 -37192792 - L1MB7 LINE L1 -268 5916 5729 3573 158 33 23 chr2 216063937 216064538 -37192045 - LTR31 LTR ERV1 -10 609 3 285 226 48 0 chr2 216064759 216064821 -37191762 - MLT1K LTR MaLR 0 588 524 6797 194 20 32 chr2 216064847 216065375 -37191208 - Charlie1a DNA MER1_type -1311 1450 917 2342 105 0 0 chr2 216065375 216065679 -37190904 - AluSx SINE Alu -8 304 1 6797 194 20 32 chr2 216065679 216066618 -37189965 - Charlie1a DNA MER1_type -1844 917 1 204 67 0 0 chr2 216067158 216067188 -37189395 + (TA)n Simple_repeat Simple_repeat 1 30 0 2198 107 3 0 chr2 216067189 216067480 -37189103 - AluSg SINE Alu -17 293 2 540 306 44 5 chr2 216068192 216068398 -37188185 - L2 LINE L2 0 3313 3100 422 221 168 0 chr2 216068533 216068628 -37187955 + MER81 DNA DNA 1 111 -3 626 241 237 15 chr2 216068950 216069224 -37187359 - LTR16A LTR ERVL 0 450 116 25 83 0 0 chr2 216069682 216069742 -37186841 + AT_rich Low_complexity Low_complexity 1 60 0 318 299 66 36 chr2 216069953 216070090 -37186493 + MER5B DNA MER1_type 10 150 -28 224 310 26 44 chr2 216069998 216070111 -37186472 - MER5A DNA MER1_type -61 128 18 * 4380 185 46 38 chr2 216070210 216070241 -37186342 - L1MB3 LINE L1 -11 6172 6143 1719 160 29 21 chr2 216070241 216070522 -37186061 + AluJb SINE Alu 1 283 -29 4380 185 46 38 chr2 216070522 216072028 -37184555 - L1MB3 LINE L1 -40 6143 4623 1881 144 0 7 chr2 216072084 216072361 -37184222 + AluJb SINE Alu 14 288 -24 189 121 0 0 chr2 216072366 216072399 -37184184 + (GA)n Simple_repeat Simple_repeat 1 33 0 894 243 47 30 chr2 216072421 216072717 -37183866 - L1ME3A LINE L1 -64 6106 5806 2189 129 0 3 chr2 216073957 216074260 -37182323 - AluSx SINE Alu -10 302 1 1132 175 116 71 chr2 216074658 216074926 -37181657 - AluJo SINE Alu -21 291 12 1015 157 79 0 chr2 216075266 216075444 -37181139 + LTR47A LTR ERVL 261 452 0 2524 167 50 13 chr2 216075580 216076042 -37180541 - MER54A LTR ERVL -405 496 18 2644 147 57 5 chr2 216076442 216076843 -37179740 + MSTB LTR MaLR 1 422 -4 1734 162 16 0 chr2 216076846 216077154 -37179429 + MSTB-int LTR MaLR 1 313 -1338 480 113 28 0 chr2 216077154 216077225 -37179358 - MER41A LTR ERV1 0 554 482 2314 118 0 0 chr2 216077225 216077530 -37179053 + AluSx SINE Alu 1 305 -7 940 148 32 0 chr2 216077947 216078102 -37178481 - HERVL74 LTR ERVL -1612 4073 3914 823 199 18 18 chr2 216078088 216078259 -37178324 - HERVL74 LTR ERVL -2027 3658 3488 * 2152 130 3 3 chr2 216078260 216078568 -37178015 + AluSx SINE Alu 1 308 -4 5969 191 14 22 chr2 216078571 216080182 -37176401 - HERVL74 LTR ERVL -2345 3340 1668 1913 169 55 17 chr2 216080182 216080543 -37176040 - THE1C LTR MaLR 0 375 1 9244 123 31 57 chr2 216080543 216082055 -37174528 - THE1C-int LTR MaLR 0 1580 112 1264 131 0 6 chr2 216082055 216082238 -37174345 - L1PA11 LINE L1 -1 6173 5992 9244 123 31 57 chr2 216082238 216082345 -37174238 - THE1C-int LTR MaLR -1468 112 4 1986 145 58 14 chr2 216082348 216082707 -37173876 - THE1C LTR MaLR 0 375 1 2600 186 92 31 chr2 216082707 216083294 -37173289 - HERVL74 LTR ERVL -4013 1672 1050 383 0 21 0 chr2 216083294 216083341 -37173242 + (TAGA)n Simple_repeat Simple_repeat 3 50 0 308 186 0 14 chr2 216083362 216083432 -37173151 + CT-rich Low_complexity Low_complexity 4 72 0 829 241 0 13 chr2 216083535 216083693 -37172890 + AluJo SINE Alu 127 282 -30 210 190 13 38 chr2 216084275 216084354 -37172229 + CT-rich Low_complexity Low_complexity 2 78 0 2148 102 3 7 chr2 216085039 216085363 -37171220 - AluSq SINE Alu 0 324 2 701 226 0 0 chr2 216085604 216085737 -37170846 + FLAM_A SINE Alu 1 133 0 668 225 0 0 chr2 216085769 216085880 -37170703 - FLAM_A SINE Alu -18 115 5 22 35 0 0 chr2 216085896 216085925 -37170658 + AT_rich Low_complexity Low_complexity 1 29 0 1822 158 3 25 chr2 216085929 216086245 -37170338 - AluSx SINE Alu -3 309 1 691 306 85 4 chr2 216086246 216086504 -37170079 + L1ME4a LINE L1 5625 5903 -218 2030 124 17 0 chr2 216086736 216087026 -37169557 - AluSx SINE Alu -17 295 1 2114 100 14 54 chr2 216087039 216087388 -37169195 - L1MA5 LINE L1 -5 6295 5961 13497 128 13 17 chr2 216087488 216089582 -37167001 - L1P LINE L1 -4048 2098 12 1921 124 3 55 chr2 216089595 216089902 -37166681 - AluSx SINE Alu -21 291 1 238 353 47 0 chr2 216089943 216090028 -37166555 - L2 LINE L2 -16 3256 3168 735 272 98 81 chr2 216090843 216091086 -37165497 - MLT1F LTR MaLR 0 542 305 3436 55 12 0 chr2 216091086 216091501 -37165082 - L1PA4 LINE L1 0 6155 5736 735 272 98 81 chr2 216091501 216091790 -37164793 - MLT1F LTR MaLR -237 305 1 625 268 73 85 chr2 216091790 216092144 -37164439 - MLT1F-int LTR MaLR 0 1371 1022 316 369 0 0 chr2 216092841 216093009 -37163574 + (CCA)n Simple_repeat Simple_repeat 1 168 0 259 308 0 0 chr2 216094218 216094283 -37162300 - MLT1F-int LTR MaLR -1209 526 462 1311 195 106 3 chr2 216094304 216094596 -37161987 + MER2 DNA MER2_type 14 335 -10 232 339 61 12 chr2 216094622 216094787 -37161796 - MLT1F-int LTR MaLR -909 462 290 342 231 0 13 chr2 216094806 216094884 -37161699 - MLT1F-int LTR MaLR -1280 91 15 266 258 114 45 chr2 216094922 216095054 -37161529 - MLT1F LTR MaLR -34 515 375 2137 113 0 20 chr2 216095167 216095460 -37161123 - AluSx SINE Alu -21 291 5 352 260 49 30 chr2 216095479 216095693 -37160890 - MLT1F LTR MaLR -323 232 1 289 238 69 50 chr2 216095967 216096068 -37160515 + MIR SINE MIR 33 135 -73 191 328 0 0 chr2 216096106 216096173 -37160410 + L2 LINE L2 2984 3050 -263 1146 265 102 32 chr2 216096449 216096860 -37159723 - MLT1J2 LTR MaLR -10 440 1 308 267 125 23 chr2 216097034 216097210 -37159373 - L1ME4a LINE L1 -158 5963 5770 399 238 79 8 chr2 216098298 216098424 -37158159 - L1ME4a LINE L1 -11 6110 5976 272 147 16 171 chr2 216098553 216098614 -37157969 - L1ME4a LINE L1 -4 6117 6085 2274 99 10 6 chr2 216098614 216098926 -37157657 + AluSq SINE Alu 1 313 0 272 147 16 171 chr2 216098926 216098993 -37157590 - L1ME4a LINE L1 -36 6085 6009 239 239 107 9 chr2 216099289 216099398 -37157185 - L1ME4a LINE L1 -504 5617 5494 2125 105 0 14 chr2 216099566 216099862 -37156721 - AluSx SINE Alu -15 297 6 348 24 0 0 chr2 216100250 216100291 -37156292 + (CA)n Simple_repeat Simple_repeat 2 42 0 8014 37 0 23 chr2 216100449 216101458 -37155125 - L1PA5 LINE L1 -3 6151 5149 202 361 50 17 chr2 216102137 216102256 -37154327 + L3 LINE CR1 1282 1404 -173 875 270 38 44 chr2 216102307 216102625 -37153958 + MER102b DNA MER1_type 26 341 0 714 176 77 29 chr2 216104368 216104764 -37151819 + Charlie1 DNA MER1_type 2172 2632 -129 289 274 89 12 chr2 216104896 216105083 -37151500 - LTR16A LTR ERVL 0 450 221 449 174 17 43 chr2 216105118 216105233 -37151350 - MER53 DNA DNA -77 112 1 693 280 43 14 chr2 216105243 216105454 -37151129 - LTR16A LTR ERVL -233 217 1 455 43 0 57 chr2 216105885 216105955 -37150628 + AluSp/q SINE Alu 241 306 -7 208 257 54 0 chr2 216106353 216106427 -37150156 + MIR SINE MIR 183 260 -2 288 0 0 0 chr2 216106997 216107029 -37149554 + (TG)n Simple_repeat Simple_repeat 2 33 0 207 0 0 0 chr2 216107976 216107999 -37148584 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2044 124 0 11 chr2 216108002 216108285 -37148298 - AluSx SINE Alu -32 280 1 640 304 68 17 chr2 216108572 216108809 -37147774 + MIR SINE MIR 2 250 -12 23 0 0 0 chr2 216108838 216108861 -37147722 + AT_rich Low_complexity Low_complexity 1 23 0 520 269 23 40 chr2 216109338 216109513 -37147070 + MIR3 SINE MIR 32 203 -5 197 353 0 0 chr2 216109637 216109688 -37146895 + MIR SINE MIR 50 100 -162 286 326 11 11 chr2 216109697 216109786 -37146797 - MER5B DNA MER1_type 0 178 90 785 148 31 0 chr2 216109823 216109951 -37146632 + L1MA9 LINE L1 5420 5551 -761 403 96 0 68 chr2 216109951 216110008 -37146575 + MADE1 DNA Mariner 1 54 -26 2502 58 0 0 chr2 216110008 216110299 -37146284 - AluY SINE Alu -20 291 1 403 96 0 68 chr2 216110299 216110314 -37146269 + MADE1 DNA Mariner 54 68 -12 2922 156 77 97 chr2 216110338 216110404 -37146179 + L1MA9 LINE L1 5550 5616 -696 2457 82 3 0 chr2 216110404 216110708 -37145875 + AluSp SINE Alu 1 305 -8 2922 156 77 97 chr2 216110708 216110920 -37145663 + L1MA9 LINE L1 5616 5831 -481 364 247 0 0 chr2 216110920 216111013 -37145570 - L1MA4 LINE L1 0 6300 6208 2922 156 77 97 chr2 216111013 216111478 -37145105 + L1MA9 LINE L1 5831 6279 -33 221 217 65 0 chr2 216111479 216111525 -37145058 - MER5B DNA MER1_type -129 49 1 180 267 52 133 chr2 216111532 216111667 -37144916 + MIR SINE MIR 113 236 -26 316 120 43 11 chr2 216112929 216113021 -37143562 + (TA)n Simple_repeat Simple_repeat 2 96 0 333 0 0 0 chr2 216113021 216113058 -37143525 + (GA)n Simple_repeat Simple_repeat 2 38 0 545 174 22 0 chr2 216113126 216113218 -37143365 + MER58C DNA MER1_type 122 215 0 208 342 120 17 chr2 216114170 216114287 -37142296 - L2 LINE L2 -42 3230 3102 2411 87 0 31 chr2 216114680 216115002 -37141581 + AluSx SINE Alu 1 312 0 358 303 0 28 chr2 216115418 216115527 -37141056 - L2 LINE L2 -1 3271 3166 30 93 0 0 chr2 216116817 216116903 -37139680 + GC_rich Low_complexity Low_complexity 1 86 0 352 300 84 95 chr2 216116917 216117581 -37139002 + L1M2 LINE L1 445 1098 -5751 181 341 0 34 chr2 216119902 216119990 -37136593 - MIR SINE MIR -103 159 75 418 305 8 0 chr2 216121490 216121608 -37134975 + MER94 DNA DNA 1 119 -15 4156 172 82 17 chr2 216121794 216122603 -37133980 + MER21B LTR ERV1 1 861 -2 2146 98 30 7 chr2 216122863 216123158 -37133425 + AluSx SINE Alu 2 303 -9 577 285 89 62 chr2 216124206 216124610 -37131973 - L2 LINE L2 -5 3267 2853 1929 157 0 0 chr2 216124635 216124916 -37131667 - AluSx SINE Alu -31 281 1 310 308 34 34 chr2 216124985 216125102 -37131481 - MIR SINE MIR -123 139 23 734 213 0 7 chr2 216125902 216126038 -37130545 + AluJo SINE Alu 2 136 -176 2088 133 152 11 chr2 216127473 216127848 -37128735 - MSTA LTR MaLR 0 428 1 9582 148 32 34 chr2 216127848 216129430 -37127153 - MSTA-int LTR MaLR 0 1580 3 2277 128 133 13 chr2 216129432 216129814 -37126769 - MSTA LTR MaLR 0 428 1 629 160 109 25 chr2 216129828 216129947 -37126636 - MSTA LTR MaLR -237 138 10 278 254 0 105 chr2 216131486 216131600 -37124983 + MIR SINE MIR 32 133 -129 195 231 0 0 chr2 216131604 216131643 -37124940 + L2 LINE L2 3218 3256 -16 1329 238 85 37 chr2 216132989 216133481 -37123102 + L2 LINE L2 2257 2772 -542 2303 170 16 41 chr2 216133642 216134390 -37122193 - L1M3 LINE L1 -570 5613 4879 2159 120 7 0 chr2 216134428 216134737 -37121846 - AluSx SINE Alu -1 311 1 223 273 45 0 chr2 216134849 216134915 -37121668 + MIR3 SINE MIR 92 160 -48 267 242 250 0 chr2 216134922 216135042 -37121541 - MER5A DNA MER1_type -7 182 33 823 296 151 10 chr2 216136226 216136480 -37120103 - L2 LINE L2 -559 2755 2538 2275 184 112 7 chr2 216136480 216136937 -37119646 + MLT1D LTR MaLR 1 505 0 823 296 151 10 chr2 216136937 216137199 -37119384 - L2 LINE L2 -776 2538 2166 2341 97 7 0 chr2 216137669 216137978 -37118605 + AluSx SINE Alu 1 311 -1 1128 153 11 5 chr2 216138092 216138281 -37118302 + MER20 DNA MER1_type 30 219 0 1302 242 24 3 chr2 216138418 216138716 -37117867 - AluJo SINE Alu -8 304 1 1602 174 59 163 chr2 216140047 216140519 -37116064 - MSTA LTR MaLR 0 426 4 8908 170 42 8 chr2 216140527 216142118 -37114465 - MSTA-int LTR MaLR -6 1645 1 2528 123 53 24 chr2 216142118 216142534 -37114049 - MSTA LTR MaLR 0 428 1 2194 265 46 42 chr2 216142555 216143503 -37113080 + L2 LINE L2 2282 3228 -85 2068 139 7 10 chr2 216145704 216146005 -37110578 + AluSx SINE Alu 1 300 -12 685 167 8 25 chr2 216146829 216146999 -37109584 + FLAM_C SINE Alu 2 169 0 1803 169 6 22 chr2 216147101 216147414 -37109169 + AluJb SINE Alu 1 308 -4 1948 152 3 0 chr2 216147962 216148251 -37108332 - AluJo SINE Alu -22 290 1 183 230 69 46 chr2 216148256 216148343 -37108240 - MIR SINE MIR -57 205 117 269 198 18 153 chr2 216148428 216148539 -37108044 + MIR SINE MIR 84 179 -83 2326 130 6 9 chr2 216149734 216150072 -37106511 + MER1B DNA MER1_type 1 337 0 225 0 0 0 chr2 216151274 216151299 -37105284 + (TA)n Simple_repeat Simple_repeat 1 25 0 335 23 23 0 chr2 216151876 216151920 -37104663 + (ATG)n Simple_repeat Simple_repeat 1 45 0 21 0 0 0 chr2 216152119 216152140 -37104443 + AT_rich Low_complexity Low_complexity 1 21 0 197 403 91 21 chr2 216152166 216152407 -37104176 + L2 LINE L2 2928 3185 -87 270 56 0 0 chr2 216153049 216153085 -37103498 + (TC)n Simple_repeat Simple_repeat 1 36 0 226 295 21 109 chr2 216156048 216156241 -37100342 - L2 LINE L2 -91 3181 3006 740 315 83 58 chr2 216156559 216157614 -37098969 - L2 LINE L2 -813 2501 1420 28 29 0 0 chr2 216157796 216157831 -37098752 + AT_rich Low_complexity Low_complexity 1 35 0 2654 111 0 3 chr2 216158110 216158472 -37098111 + THE1B LTR MaLR 1 361 -3 562 313 101 33 chr2 216159010 216159552 -37097031 - L2 LINE L2 0 3272 2701 279 175 0 0 chr2 216160045 216160102 -37096481 + CT-rich Low_complexity Low_complexity 1 57 0 1458 155 71 10 chr2 216160115 216160411 -37096172 - L1MB7 LINE L1 -32 6152 5839 206 295 98 27 chr2 216160532 216160644 -37095939 - L2 LINE L2 -11 3302 3183 293 288 54 36 chr2 216161560 216161671 -37094912 - L2 LINE L2 -1 3312 3200 574 219 62 7 chr2 216161801 216162032 -37094551 - LTR16C LTR ERVL 0 491 173 326 240 39 78 chr2 216162938 216163092 -37093491 - MIR SINE MIR -20 242 95 1971 153 31 36 chr2 216163326 216163718 -37092865 + MLT1B LTR MaLR 1 390 0 369 264 146 113 chr2 216165365 216165736 -37090847 - L2 LINE L2 -5 3267 2885 997 182 61 141 chr2 216165833 216166224 -37090359 - MLT1A1 LTR MaLR -5 360 1 22 0 0 0 chr2 216166566 216166588 -37089995 + AT_rich Low_complexity Low_complexity 1 22 0 2408 86 3 0 chr2 216166745 216167048 -37089535 - AluSq SINE Alu -9 304 1 1434 164 17 7 chr2 216167343 216167635 -37088948 - L1MA9 LINE L1 -6 6306 6012 32064 32 4 0 chr2 216168194 216173029 -37083554 + L1PA4 LINE L1 1307 6155 0 22 0 0 0 chr2 216173029 216173051 -37083532 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr2 216173412 216173435 -37083148 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 216174224 216174245 -37082338 + AT_rich Low_complexity Low_complexity 1 21 0 224 379 170 8 chr2 216174550 216174785 -37081798 - L3 LINE CR1 -6 1571 1299 264 257 54 0 chr2 216176774 216176848 -37079735 + L2 LINE L2 3236 3313 0 202 246 131 57 chr2 216178063 216178185 -37078398 - MIR SINE MIR -55 153 23 484 226 44 44 chr2 216178674 216178753 -37077830 - MIR SINE MIR -30 232 151 2097 126 139 16 chr2 216178753 216179134 -37077449 - MSTA LTR MaLR 0 428 1 484 226 44 44 chr2 216179134 216179191 -37077392 - MIR SINE MIR -110 152 96 2779 116 9 14 chr2 216180582 216181012 -37075571 + MSTA LTR MaLR 1 428 0 2401 62 10 0 chr2 216181414 216181702 -37074881 - AluY SINE Alu -20 291 1 2230 113 3 0 chr2 216181750 216182059 -37074524 + AluSx SINE Alu 1 310 -2 296 200 118 15 chr2 216182566 216182701 -37073882 - HAL1b LINE L1 -18 1330 1182 33 66 0 0 chr2 216182737 216182798 -37073785 + AT_rich Low_complexity Low_complexity 1 61 0 2319 107 0 0 chr2 216182817 216183125 -37073458 - AluSx SINE Alu -4 308 1 264 323 13 26 chr2 216183275 216183430 -37073153 - MER117 DNA MER1_type -34 163 11 270 202 76 50 chr2 216183603 216183722 -37072861 - HAL1b LINE L1 -262 1086 965 651 246 150 52 chr2 216183796 216184397 -37072186 - HAL1b LINE L1 -515 833 174 14713 115 40 13 chr2 216186088 216188444 -37068139 + Tigger1 DNA MER2_type 1 2418 0 21 0 0 0 chr2 216188688 216188709 -37067874 + AT_rich Low_complexity Low_complexity 1 21 0 263 244 30 96 chr2 216189444 216189579 -37067004 - L1ME3A LINE L1 -77 6093 5968 23 0 0 0 chr2 216189601 216189624 -37066959 + AT_rich Low_complexity Low_complexity 1 23 0 1593 198 56 31 chr2 216189762 216190120 -37066463 - MLT1A2 LTR MaLR 0 374 8 210 169 17 34 chr2 216190372 216190431 -37066152 + A-rich Low_complexity Low_complexity 3 60 0 226 211 70 42 chr2 216190829 216190900 -37065683 - L2 LINE L2 -5 3267 3195 1544 207 0 10 chr2 216193106 216193411 -37063172 + AluJb SINE Alu 1 302 -10 251 276 72 28 chr2 216194851 216195032 -37061551 - L1ME4a LINE L1 -15 6106 5918 400 247 247 35 chr2 216195146 216195373 -37061210 - L1ME4a LINE L1 -454 5667 5393 299 182 13 0 chr2 216195486 216195563 -37061020 + (TA)n Simple_repeat Simple_repeat 1 78 0 375 216 20 95 chr2 216195594 216195778 -37060805 - L1ME4a LINE L1 -1751 4395 4226 2234 111 39 33 chr2 216197861 216198223 -37058360 - THE1B LTR MaLR 0 364 1 694 166 7 58 chr2 216198391 216198530 -37058053 - MER94 DNA DNA 0 134 3 196 253 89 13 chr2 216198696 216198775 -37057808 - MIR3 SINE MIR -3 205 121 207 0 0 0 chr2 216198952 216198975 -37057608 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2213 114 0 0 chr2 216198977 216199266 -37057317 - AluSg SINE Alu -21 289 1 438 36 0 0 chr2 216199518 216199574 -37057009 + (CA)n Simple_repeat Simple_repeat 2 57 0 447 288 35 38 chr2 216199903 216200144 -37056439 - MLT1J2 LTR MaLR -172 237 1 371 295 0 0 chr2 216201039 216201117 -37055466 - L2 LINE L2 -1 3271 3194 203 312 32 32 chr2 216202109 216202202 -37054381 - MIR3 SINE MIR -1 207 115 366 169 24 24 chr2 216202260 216202343 -37054240 + MIR SINE MIR 180 262 0 22 0 0 0 chr2 216202753 216202775 -37053808 + AT_rich Low_complexity Low_complexity 1 22 0 1759 155 20 10 chr2 216202775 216203072 -37053511 - AluJo SINE Alu -12 300 1 1441 186 33 99 chr2 216203092 216203196 -37053387 + MER58B DNA MER1_type 1 110 -2310 2211 93 3 3 chr2 216203196 216203485 -37053098 - AluSc SINE Alu -20 289 1 1441 186 33 99 chr2 216203485 216203745 -37052838 + MER58B DNA MER1_type 110 341 0 814 50 0 0 chr2 216203915 216204015 -37052568 + AluY SINE Alu 205 304 -7 198 0 0 0 chr2 216204046 216204068 -37052515 + (T)n Simple_repeat Simple_repeat 1 22 0 399 284 29 10 chr2 216204752 216204854 -37051729 - MIR SINE MIR -74 188 85 533 315 56 19 chr2 216205966 216206394 -37050189 - L1ME4a LINE L1 -145 5976 5533 21 0 0 0 chr2 216206398 216206419 -37050164 + AT_rich Low_complexity Low_complexity 1 21 0 2290 95 7 10 chr2 216206573 216206879 -37049704 - AluSq SINE Alu -8 305 1 1111 194 100 32 chr2 216207392 216207671 -37048912 - L1MB8 LINE L1 -2 6176 5879 833 152 2 155 chr2 216207679 216207931 -37048652 - L1MA9 LINE L1 -5 6307 6099 3755 172 7 19 chr2 216208632 216209365 -37047218 + L1MB7 LINE L1 5444 6167 -17 412 149 46 35 chr2 216209503 216209590 -37046993 - L1MA9 LINE L1 -308 5881 5794 207 69 0 0 chr2 216209590 216209619 -37046964 + (TG)n Simple_repeat Simple_repeat 2 30 0 1333 186 69 58 chr2 216209619 216209697 -37046886 + L1MA9 LINE L1 5877 5953 -359 552 90 0 0 chr2 216209697 216209775 -37046808 - MADE1 DNA Mariner 0 80 3 1333 186 69 58 chr2 216209775 216210089 -37046494 + L1MA9 LINE L1 5953 6273 -39 2267 110 0 0 chr2 216210090 216210382 -37046201 - AluSx SINE Alu -20 292 1 351 247 0 14 chr2 216210465 216210538 -37046045 - L2 LINE L2 -49 3264 3193 26 0 0 0 chr2 216211577 216211603 -37044980 + AT_rich Low_complexity Low_complexity 1 26 0 252 86 0 0 chr2 216212129 216212164 -37044419 + (TTA)n Simple_repeat Simple_repeat 2 36 0 765 154 0 24 chr2 216212164 216212287 -37044296 - FLAM_C SINE Alu -20 123 4 1043 146 0 19 chr2 216213393 216213551 -37043032 + AluSg/x SINE Alu 119 273 -37 180 0 0 0 chr2 216213559 216213579 -37043004 + (GAAAA)n Simple_repeat Simple_repeat 2 21 0 477 0 0 0 chr2 216213593 216213646 -37042937 + (CA)n Simple_repeat Simple_repeat 2 54 0 1077 179 73 6 chr2 216213653 216213832 -37042751 - MER8 DNA MER2_type -25 214 24 21 0 0 0 chr2 216214269 216214290 -37042293 + AT_rich Low_complexity Low_complexity 1 21 0 248 167 24 24 chr2 216214290 216214374 -37042209 + (TTA)n Simple_repeat Simple_repeat 2 85 0 890 131 0 0 chr2 216214434 216214564 -37042019 + AluSg/x SINE Alu 173 302 -8 342 230 148 15 chr2 216214619 216214754 -37041829 + HAL1 LINE L1 2058 2210 -297 519 243 62 48 chr2 216214780 216214990 -37041593 + HAL1 LINE L1 2281 2493 -14 247 346 11 34 chr2 216215572 216215751 -37040832 - L2 LINE L2 -17 3296 3122 3291 91 40 0 chr2 216217004 216217127 -37039456 + L1PB1 LINE L1 5660 5777 -374 228 67 0 0 chr2 216217127 216217157 -37039426 + (CA)n Simple_repeat Simple_repeat 2 31 0 3291 91 40 0 chr2 216217157 216217506 -37039077 + L1PB1 LINE L1 5777 6151 0 1007 304 77 31 chr2 216217765 216217990 -37038593 - L2 LINE L2 -3 3310 3097 1759 65 9 0 chr2 216217990 216218206 -37038377 - AluY SINE Alu -11 300 83 1007 304 77 31 chr2 216218206 216218460 -37038123 - L2 LINE L2 -216 3097 2809 2103 114 0 0 chr2 216218582 216218862 -37037721 + AluSg SINE Alu 1 280 -30 186 71 0 0 chr2 216218862 216218890 -37037693 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 294 256 155 0 chr2 216219884 216220013 -37036570 - L1ME4a LINE L1 -3 6118 5970 414 279 93 0 chr2 216220088 216220217 -37036366 + MIR SINE MIR 107 247 -15 350 336 16 0 chr2 216220253 216220378 -37036205 - L1ME4a LINE L1 -476 5645 5519 30 0 0 0 chr2 216222637 216222667 -37033916 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 216223730 216223751 -37032832 + AT_rich Low_complexity Low_complexity 1 21 0 2632 30 0 0 chr2 216223976 216224276 -37032307 - AluY SINE Alu -10 301 2 856 198 118 0 chr2 216224529 216224716 -37031867 + MER63A DNA MER1_type 2 210 0 1496 210 0 21 chr2 216226013 216226344 -37030239 - AluJb SINE Alu 0 325 1 941 105 0 0 chr2 216226472 216226596 -37029987 + AluSx SINE Alu 1 124 -188 276 149 0 0 chr2 216226601 216226648 -37029935 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 1220 137 0 0 chr2 216226650 216226825 -37029758 + AluSx SINE Alu 121 295 -17 21 0 0 0 chr2 216227731 216227752 -37028831 + AT_rich Low_complexity Low_complexity 1 21 0 251 240 357 8 chr2 216228075 216228204 -37028379 + MIR SINE MIR 77 250 -12 * 1550 289 122 27 chr2 216228200 216228947 -37027636 + L2 LINE L2 1899 2716 -598 705 182 0 54 chr2 216230458 216230606 -37025977 - FLAM_C SINE Alu -3 140 1 2380 73 0 0 chr2 216232298 216232620 -37023963 - AluY SINE Alu 0 322 1 558 237 115 87 chr2 216233709 216233996 -37022587 - MLT1J LTR MaLR -176 335 41 397 192 73 3 chr2 216236330 216236493 -37020090 - ORSL DNA AcHobo 0 275 62 2401 79 0 3 chr2 216237101 216237406 -37019177 - AluY SINE Alu -7 304 1 226 237 0 0 chr2 216237521 216237580 -37019003 + (TA)n Simple_repeat Simple_repeat 2 60 0 364 292 42 42 chr2 216237936 216238104 -37018479 - MIR SINE MIR -80 182 15 50 59 0 0 chr2 216239546 216239631 -37016952 + AT_rich Low_complexity Low_complexity 1 85 0 1746 124 71 55 chr2 216241107 216241471 -37015112 - THE1C LTR MaLR -1 374 5 771 258 111 26 chr2 216241684 216241990 -37014593 + MER46C DNA MER2_type 7 338 0 2478 65 0 0 chr2 216244570 216244880 -37011703 + AluY SINE Alu 1 310 -1 5351 101 24 32 chr2 216246612 216247352 -37009231 - Tigger4(Zombi) DNA MER2_type 0 2731 1998 576 78 0 0 chr2 216247352 216247429 -37009154 + MADE1 DNA Mariner 1 77 -3 5351 101 24 32 chr2 216247429 216247558 -37009025 - Tigger4(Zombi) DNA MER2_type -733 1998 1869 505 133 0 48 chr2 216247553 216247636 -37008947 - Tigger4(Zombi) DNA MER2_type -2652 79 1 * 509 270 230 15 chr2 216248268 216248538 -37008045 - L2 LINE L2 -6 3307 2980 234 304 62 62 chr2 216248564 216248676 -37007907 - L2 LINE L2 -437 2877 2766 263 315 92 46 chr2 216248692 216248930 -37007653 - L1ME LINE L1 -247 5874 5626 6903 25 1 0 chr2 216250638 216251443 -37005140 - L1PA3 LINE L1 0 6155 5350 15129 194 86 17 chr2 216251579 216255241 -37001342 - L1PB1 LINE L1 0 6867 3461 186 43 0 0 chr2 216255241 216255264 -37001319 + (TTCC)n Simple_repeat Simple_repeat 3 25 0 2422 72 0 0 chr2 216255264 216255554 -37001029 - AluSq SINE Alu -23 290 1 15129 194 86 17 chr2 216255554 216256549 -37000034 - L1PB1 LINE L1 -3406 3461 2537 2471 67 0 0 chr2 216256549 216256849 -36999734 + AluY SINE Alu 1 300 -11 15129 194 86 17 chr2 216256849 216258612 -36997971 - L1PB1 LINE L1 -4330 2537 6 1225 222 124 120 chr2 216259032 216259935 -36996648 - L2 LINE L2 -24 3289 2384 632 261 48 34 chr2 216262521 216262728 -36993855 - MER63A DNA MER1_type 0 210 1 2141 142 0 0 chr2 216263465 216263774 -36992809 - AluSx SINE Alu -3 309 1 21 0 0 0 chr2 216264053 216264074 -36992509 + AT_rich Low_complexity Low_complexity 1 21 0 797 161 0 0 chr2 216264426 216264544 -36992039 + FLAM_C SINE Alu 1 118 -15 1409 257 52 29 chr2 216264566 216265365 -36991218 - L1ME3A LINE L1 -19 6151 5316 578 261 80 34 chr2 216266663 216266927 -36989656 - MARNA DNA Mariner -65 521 246 343 163 0 0 chr2 216267237 216267286 -36989297 - Tigger3(Golem) DNA MER2_type -2957 72 24 336 102 0 0 chr2 216267292 216267341 -36989242 - Tigger3(Golem) DNA MER2_type -207 2822 2774 1507 164 0 22 chr2 216267344 216267613 -36988970 + Tigger3(Golem) DNA MER2_type 2766 3028 -1 1530 112 0 0 chr2 216268362 216268577 -36988006 + AluSc SINE Alu 86 300 -9 25 90 0 0 chr2 216269129 216269196 -36987387 + AT_rich Low_complexity Low_complexity 1 67 0 420 309 52 57 chr2 216270080 216270274 -36986309 - MIR3 SINE MIR -14 194 2 1514 138 161 0 chr2 216270282 216270542 -36986041 - AluJb SINE Alu 0 302 1 1948 132 42 0 chr2 216270555 216270842 -36985741 - AluSg SINE Alu -11 299 1 276 183 0 0 chr2 216271898 216271958 -36984625 - L1ME4a LINE L1 -4 6117 6058 2034 120 0 4 chr2 216271993 216272268 -36984315 + AluSx SINE Alu 1 274 -38 2341 97 0 0 chr2 216272299 216272598 -36983985 + AluSx SINE Alu 1 299 -13 219 299 75 0 chr2 216273008 216273075 -36983508 - L2 LINE L2 -1 3312 3241 2380 77 0 3 chr2 216273296 216273596 -36982987 + AluY SINE Alu 1 299 -12 28 0 0 0 chr2 216274308 216274336 -36982247 + AT_rich Low_complexity Low_complexity 1 28 0 355 319 129 12 chr2 216274671 216274834 -36981749 - MIR3 SINE MIR -11 197 16 1792 177 3 3 chr2 216274867 216275166 -36981417 + AluJb SINE Alu 1 299 -13 23 54 0 0 chr2 216275306 216275343 -36981240 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr2 216277147 216277169 -36979414 + AT_rich Low_complexity Low_complexity 1 22 0 2426 76 0 7 chr2 216277362 216277666 -36978917 + AluSg SINE Alu 3 304 -6 21 0 0 0 chr2 216281393 216281414 -36975169 + AT_rich Low_complexity Low_complexity 1 21 0 1047 217 23 9 chr2 216281485 216281706 -36974877 - MER58A DNA MER1_type 0 224 1 587 259 14 0 chr2 216281769 216281908 -36974675 + MIR SINE MIR 106 246 -16 189 0 0 0 chr2 216281940 216281961 -36974622 + (TTA)n Simple_repeat Simple_repeat 2 22 0 2250 110 3 0 chr2 216286434 216286735 -36969848 - AluSp SINE Alu -11 302 1 2062 96 50 0 chr2 216287760 216288040 -36968543 + AluSq SINE Alu 1 294 -19 212 226 16 16 chr2 216291903 216291965 -36964618 + CT-rich Low_complexity Low_complexity 3 64 0 24 0 0 0 chr2 216292322 216292346 -36964237 + AT_rich Low_complexity Low_complexity 1 24 0 388 329 83 72 chr2 216295717 216296079 -36960504 - L2 LINE L2 0 3272 2907 186 261 46 31 chr2 216296305 216296370 -36960213 - L2 LINE L2 -189 3083 3018 798 207 28 72 chr2 216297504 216297794 -36958789 - MER102a DNA MER1_type 0 330 54 312 242 98 23 chr2 216298554 216298686 -36957897 - L1ME4a LINE L1 -1 6120 5979 207 0 0 0 chr2 216298786 216298809 -36957774 + (TG)n Simple_repeat Simple_repeat 1 23 0 271 313 27 67 chr2 216298882 216299032 -36957551 + L2 LINE L2 2917 3060 -212 266 254 15 15 chr2 216299081 216299148 -36957435 - MIR SINE MIR -182 80 14 378 0 0 0 chr2 216299177 216299219 -36957364 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 886 144 7 0 chr2 216299219 216299358 -36957225 - FRAM SINE Alu -30 146 7 212 306 66 50 chr2 216299368 216299489 -36957094 - MIR SINE MIR -124 138 16 576 293 127 17 chr2 216300287 216300649 -36955934 - MLT1J LTR MaLR -6 505 104 684 281 82 4 chr2 216300925 216301192 -36955391 + LTR16A LTR ERVL 158 445 -5 345 368 122 12 chr2 216301366 216301784 -36954799 - L2 LINE L2 -624 2690 2227 1846 153 33 0 chr2 216304227 216304529 -36952054 - AluSq SINE Alu 0 311 1 252 297 21 62 chr2 216305169 216305314 -36951269 + L2 LINE L2 3111 3249 -64 27 29 0 0 chr2 216306226 216306260 -36950323 + AT_rich Low_complexity Low_complexity 1 34 0 688 282 37 23 chr2 216306269 216306617 -36949966 - L1ME4a LINE L1 -221 5949 5597 299 325 34 8 chr2 216306716 216306833 -36949750 - MIR3 SINE MIR -1 207 88 182 337 158 10 chr2 216307883 216307984 -36948599 - L2 LINE L2 -8 3264 3149 2211 84 9 50 chr2 216309886 216310209 -36946374 + AluSq SINE Alu 1 310 -3 2094 130 32 12 chr2 216310489 216310828 -36945755 - MER7A DNA MER2_type -2 344 1 24 32 0 0 chr2 216310872 216310903 -36945680 + AT_rich Low_complexity Low_complexity 1 31 0 477 266 101 0 chr2 216311350 216311508 -36945075 - MIR SINE MIR 0 262 89 288 269 58 0 chr2 216311580 216311684 -36944899 - MER104 DNA Tc2 -67 113 4 1767 306 124 44 chr2 216311742 216313379 -36943204 + L2 LINE L2 1184 3121 -192 1792 144 10 46 chr2 216313391 216313696 -36942887 - AluSx SINE Alu -18 294 1 36 0 0 0 chr2 216313933 216313969 -36942614 + AT_rich Low_complexity Low_complexity 1 36 0 436 208 89 0 chr2 216313982 216314083 -36942500 + L2 LINE L2 3186 3295 -18 690 180 0 0 chr2 216314371 216314510 -36942073 - L1P LINE L1 -4456 1690 1552 21 0 0 0 chr2 216317120 216317141 -36939442 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr2 216317170 216317202 -36939381 + AT_rich Low_complexity Low_complexity 1 32 0 2475 57 0 3 chr2 216319397 216319694 -36936889 + AluY SINE Alu 1 296 -15 268 328 38 46 chr2 216320528 216320659 -36935924 + MIR3 SINE MIR 76 205 -3 354 23 0 0 chr2 216320973 216321001 -36935582 + (CA)n Simple_repeat Simple_repeat 1 71 0 354 23 0 0 chr2 216321001 216321044 -36935539 + (CA)n Simple_repeat Simple_repeat 2 44 0 547 249 18 18 chr2 216321492 216321657 -36934926 + L1ME LINE L1 5621 5785 -336 25 83 0 0 chr2 216322200 216322260 -36934323 + AT_rich Low_complexity Low_complexity 1 60 0 22 0 0 0 chr2 216322326 216322348 -36934235 + AT_rich Low_complexity Low_complexity 1 22 0 1293 236 34 6 chr2 216323577 216323903 -36932680 - MER58B DNA MER1_type 0 341 7 731 244 148 17 chr2 216324208 216324438 -36932145 + MIR SINE MIR 3 262 0 1064 141 42 0 chr2 216324555 216324746 -36931837 - L1MD2 LINE L1 -9 6350 6152 219 69 0 0 chr2 216324748 216324777 -36931806 + (TG)n Simple_repeat Simple_repeat 2 30 0 702 226 38 21 chr2 216325561 216325747 -36930836 - MER5A DNA MER1_type 0 189 1 564 255 187 21 chr2 216325824 216326204 -36930379 + L1ME4a LINE L1 5573 6015 -106 219 297 31 0 chr2 216326721 216326785 -36929798 + L2 LINE L2 3207 3272 0 504 279 52 12 chr2 216327081 216327253 -36929330 + L2 LINE L2 2255 2433 -881 393 255 85 0 chr2 216327258 216327364 -36929219 + L2 LINE L2 2591 2705 -609 380 206 15 0 chr2 216327391 216327459 -36929124 + L2 LINE L2 3204 3272 0 2631 149 0 23 chr2 216327591 216328033 -36928550 + Tigger2a DNA MER2_type 2 433 -1 1617 178 6 31 chr2 216328269 216328623 -36927960 - L1M4c LINE L1 -1913 4819 4475 1134 182 0 0 chr2 216328624 216328789 -36927794 - AluJo/FRAM SINE Alu -14 298 134 1782 174 0 45 chr2 216328790 216329100 -36927483 - AluJb SINE Alu -16 296 1 2727 234 37 10 chr2 216329101 216330115 -36926468 - L1M4c LINE L1 -3237 3495 2442 2325 98 3 0 chr2 216330141 216330438 -36926145 - AluSp SINE Alu -15 298 1 1166 203 16 100 chr2 216330499 216330819 -36925764 - AluJo SINE Alu -9 293 1 26 0 0 0 chr2 216330917 216330943 -36925640 + AT_rich Low_complexity Low_complexity 1 26 0 2725 260 62 8 chr2 216331004 216332113 -36924470 - L1M4c LINE L1 -4516 2137 1243 2466 58 0 10 chr2 216332541 216332850 -36923733 - AluY SINE Alu -5 306 1 243 0 0 0 chr2 216332861 216332888 -36923695 + (A)n Simple_repeat Simple_repeat 1 27 0 2361 133 2 52 chr2 216334264 216334671 -36921912 + MLT1B LTR MaLR 3 389 -1 2217 128 71 47 chr2 216334810 216335233 -36921350 + Tigger2a DNA MER2_type 2 434 0 1093 212 34 30 chr2 216335248 216335484 -36921099 + Tigger5 DNA MER2_type 2 238 -2085 * 1357 143 8 4 chr2 216335474 216335711 -36920872 + Tigger5 DNA MER2_type 2085 2322 -1 433 231 29 0 chr2 216336012 216336116 -36920467 - MIR SINE MIR 0 262 156 22 56 0 0 chr2 216336890 216336926 -36919657 + AT_rich Low_complexity Low_complexity 1 36 0 4281 197 113 34 chr2 216337213 216337751 -36918832 + Charlie1a DNA MER1_type 4 498 -2263 1890 141 0 17 chr2 216337751 216338041 -36918542 + AluJo SINE Alu 1 285 -27 4281 197 113 34 chr2 216338041 216338742 -36917841 + Charlie1a DNA MER1_type 498 1341 -114 281 198 18 45 chr2 216338744 216338882 -36917701 + (TTTA)n Simple_repeat Simple_repeat 1 134 0 403 200 11 0 chr2 216338904 216338994 -36917589 + Charlie1a DNA MER1_type 1362 1452 -3 1179 107 0 13 chr2 216339534 216339693 -36916890 - AluSg/x SINE Alu -21 289 133 321 26 0 0 chr2 216340109 216340147 -36916436 + (TG)n Simple_repeat Simple_repeat 2 39 0 1354 180 73 0 chr2 216340148 216340237 -36916346 + AluJo SINE Alu 28 109 -203 333 0 0 0 chr2 216340237 216340274 -36916309 + (CA)n Simple_repeat Simple_repeat 2 38 0 1354 180 73 0 chr2 216340274 216340429 -36916154 + AluJo SINE Alu 109 290 -22 929 266 39 36 chr2 216340448 216340905 -36915678 + L2 LINE L2 2682 3133 -180 345 47 0 0 chr2 216341065 216341108 -36915475 + (TG)n Simple_repeat Simple_repeat 2 44 0 232 338 46 60 chr2 216341811 216341962 -36914621 - L3 LINE CR1 -121 1456 1308 2237 118 24 27 chr2 216342079 216342453 -36914130 + THE1C LTR MaLR 1 373 -2 498 337 157 14 chr2 216342510 216342854 -36913729 - L3 LINE CR1 -575 1002 610 21 0 0 0 chr2 216343146 216343167 -36913416 + AT_rich Low_complexity Low_complexity 1 21 0 180 77 0 0 chr2 216345413 216345439 -36911144 + (CA)n Simple_repeat Simple_repeat 2 27 0 1760 82 8 31 chr2 216346304 216346561 -36910022 - L1PA12 LINE L1 -7 6161 5911 2304 110 0 0 chr2 216346632 216346932 -36909651 - AluSg SINE Alu -10 300 1 279 0 0 0 chr2 216348492 216348523 -36908060 + (TG)n Simple_repeat Simple_repeat 2 32 0 327 261 0 22 chr2 216348523 216348615 -36907968 + L1MC4 LINE L1 6614 6703 -1339 241 189 22 0 chr2 216348627 216348717 -36907866 + (TA)n Simple_repeat Simple_repeat 2 93 0 6354 65 20 0 chr2 216349122 216349954 -36906629 + L1PA8 LINE L1 5306 6154 -18 1088 129 129 54 chr2 216350013 216350292 -36906291 + L1MA10 LINE L1 5995 6294 -40 2009 142 0 3 chr2 216350331 216350620 -36905963 - AluSx SINE Alu -20 292 5 2190 113 3 0 chr2 216351085 216351377 -36905206 + AluSx SINE Alu 1 293 -19 804 258 152 23 chr2 216351605 216352222 -36904361 + L1ME4a LINE L1 5408 6104 -17 570 195 51 0 chr2 216353301 216353419 -36903164 - MLT1B LTR MaLR 0 390 267 2505 127 3 3 chr2 216353426 216353788 -36902795 - THE1B LTR MaLR 0 364 3 350 296 45 49 chr2 216353831 216354054 -36902529 - L1MC4a LINE L1 -1866 5942 5721 347 192 176 16 chr2 216354106 216354231 -36902352 + L2 LINE L2 1529 1673 -1641 9549 103 9 5 chr2 216354241 216355735 -36900848 - L1P LINE L1 -1475 4671 3172 1849 259 19 8 chr2 216355748 216356235 -36900348 + L2 LINE L2 1947 2438 -876 567 253 124 34 chr2 216356533 216356710 -36899873 + L2 LINE L2 2639 2843 -471 2248 116 0 0 chr2 216356710 216357020 -36899563 - AluSx SINE Alu -2 310 1 567 253 124 34 chr2 216357020 216357075 -36899508 + L2 LINE L2 2843 2892 -422 388 31 0 62 chr2 216357075 216357139 -36899444 - MADE1 DNA Mariner -20 60 1 857 293 93 29 chr2 216357141 216357516 -36899067 + L2 LINE L2 2911 3309 -4 377 323 20 36 chr2 216357543 216357673 -36898910 - L1MC4a LINE L1 -2250 5558 5432 1814 144 0 58 chr2 216357673 216357986 -36898597 - AluJo SINE Alu -4 308 14 377 323 20 36 chr2 216357986 216358103 -36898480 - L1MC4a LINE L1 -2376 5432 5315 333 0 0 0 chr2 216358520 216358557 -36898026 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 1612 164 0 19 chr2 216358571 216358839 -36897744 - AluJb SINE Alu -49 263 1 324 294 126 11 chr2 216360990 216361276 -36895307 - L1MC4a LINE L1 -1099 5047 4729 3010 211 10 8 chr2 216361439 216362066 -36894517 + MER82 DNA MER2_type 20 647 -6 412 344 100 37 chr2 216362103 216362563 -36894020 - L1MC4a LINE L1 -1608 4538 4050 371 221 0 47 chr2 216363013 216363099 -36893484 - MIR SINE MIR -63 145 64 198 91 0 0 chr2 216363242 216363275 -36893308 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 1165 274 89 31 chr2 216363275 216364037 -36892546 - L2 LINE L2 -13 3300 2493 182 303 93 62 chr2 216364053 216364215 -36892368 - L2 LINE L2 -50 3263 3097 201 314 111 39 chr2 216364245 216364398 -36892185 - L2 LINE L2 -434 2880 2717 2154 127 0 0 chr2 216364507 216364799 -36891784 + AluSx SINE Alu 1 292 -20 22 0 0 0 chr2 216364966 216364988 -36891595 + AT_rich Low_complexity Low_complexity 1 22 0 1575 186 55 21 chr2 216365369 216365659 -36890924 + AluJo SINE Alu 1 300 -12 421 368 43 0 chr2 216365801 216366059 -36890524 + L1ME4a LINE L1 5560 5828 -293 21 36 0 0 chr2 216366182 216366210 -36890373 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 216367603 216367625 -36888958 + AT_rich Low_complexity Low_complexity 1 22 0 325 248 85 7 chr2 216368587 216368728 -36887855 + MER102a DNA MER1_type 29 180 -150 467 340 7 0 chr2 216369162 216369312 -36887271 + MER102a DNA MER1_type 179 329 -1 739 261 75 33 chr2 216369864 216370105 -36886478 - MIR SINE MIR 0 262 12 239 232 0 18 chr2 216370233 216370289 -36886294 + L2 LINE L2 3254 3308 -5 239 216 26 122 chr2 216370953 216371099 -36885484 - MIR SINE MIR -5 203 79 229 284 54 14 chr2 216371230 216371304 -36885279 + MIR SINE MIR 66 142 -66 267 332 242 14 chr2 216372259 216372470 -36884113 + MIR SINE MIR 2 260 -2 1561 178 29 7 chr2 216372529 216372842 -36883741 + AluJo SINE Alu 1 319 0 210 222 0 0 chr2 216373796 216373832 -36882751 + G-rich Low_complexity Low_complexity 1 36 0 197 250 67 17 chr2 216373884 216373944 -36882639 + MIR SINE MIR 96 158 -104 3563 60 2 0 chr2 216373978 216374432 -36882151 - L1PA8 LINE L1 -7 6165 5711 607 92 25 92 chr2 216374443 216374562 -36882021 - HY1 scRNA scRNA -1 111 1 2910 178 30 13 chr2 216374677 216375305 -36881278 + L1MA9 LINE L1 5652 6290 -22 235 268 10 72 chr2 216375316 216375413 -36881170 - MIR SINE MIR -81 127 37 199 129 129 100 chr2 216376063 216376133 -36880450 + MIR3 SINE MIR 123 194 -14 238 342 13 0 chr2 216377478 216377557 -36879026 - L2 LINE L2 0 3313 3234 235 306 102 25 chr2 216377615 216377772 -36878811 - L2 LINE L2 -209 3063 2895 344 63 11 168 chr2 216377896 216377991 -36878592 + LTR37A LTR ERV1 81 160 -266 2236 109 0 3 chr2 216378481 216378774 -36877809 - AluSp SINE Alu -21 292 1 21 0 0 0 chr2 216379027 216379048 -36877535 + AT_rich Low_complexity Low_complexity 1 21 0 360 237 172 0 chr2 216379455 216379548 -36877035 - L2 LINE L2 -3 3310 3202 26 0 0 0 chr2 216379860 216379886 -36876697 + AT_rich Low_complexity Low_complexity 1 26 0 318 244 24 49 chr2 216379891 216380014 -36876569 + L1ME4a LINE L1 5964 6083 -38 1803 140 0 4 chr2 216382542 216382820 -36873763 + AluSx SINE Alu 1 277 -35 279 54 0 0 chr2 216382825 216382862 -36873721 + (CA)n Simple_repeat Simple_repeat 2 38 0 189 0 0 0 chr2 216383318 216383339 -36873244 + (GAAAA)n Simple_repeat Simple_repeat 5 25 0 23 0 0 0 chr2 216383646 216383669 -36872914 + AT_rich Low_complexity Low_complexity 1 23 0 260 254 45 15 chr2 216384036 216384103 -36872480 - MIR3 SINE MIR -28 180 112 489 260 0 24 chr2 216384371 216384498 -36872085 - L2 LINE L2 0 3313 3190 366 186 93 47 chr2 216384504 216384633 -36871950 + L1ME4a LINE L1 5987 6121 0 208 320 174 11 chr2 216384727 216384905 -36871678 + MIR SINE MIR 6 212 -50 202 229 0 0 chr2 216384911 216384959 -36871624 + T-rich Low_complexity Low_complexity 1 48 0 1814 47 0 9 chr2 216384961 216385194 -36871389 - L1PA4 LINE L1 0 6155 5925 399 255 51 87 chr2 216385479 216385675 -36870908 + MER5A DNA MER1_type 1 189 0 296 358 65 35 chr2 216385717 216386027 -36870556 - L2 LINE L2 -1409 1905 1587 392 301 88 58 chr2 216386070 216386435 -36870148 + MLT1K LTR MaLR 67 442 -146 1282 124 36 0 chr2 216386488 216386713 -36869870 - L1MA8 LINE L1 -2 6289 6057 2450 57 14 0 chr2 216387574 216387871 -36868712 - AluY SINE Alu -3 308 8 2333 99 0 0 chr2 216389184 216389511 -36867072 + AluSc SINE Alu 1 309 0 315 0 0 0 chr2 216390420 216390455 -36866128 + (CA)n Simple_repeat Simple_repeat 2 36 0 790 162 132 0 chr2 216390726 216390893 -36865690 + MER5A DNA MER1_type 1 189 0 219 186 0 0 chr2 216392113 216392156 -36864427 + (TA)n Simple_repeat Simple_repeat 1 43 0 7429 123 22 41 chr2 216392250 216392549 -36864034 + HSMAR2 DNA Mariner 12 315 -987 2655 89 22 5 chr2 216392549 216392919 -36863664 + L1PA10 LINE L1 5788 6163 -5 7429 123 22 41 chr2 216392919 216393931 -36862652 + HSMAR2 DNA Mariner 315 1298 -4 1871 135 11 7 chr2 216394246 216394566 -36862017 + AluSx SINE Alu 1 321 0 2019 127 25 0 chr2 216395499 216395821 -36860762 + THE1B LTR MaLR 2 331 -33 357 356 97 14 chr2 216397441 216397657 -36858926 + L1 LINE L1 3692 3925 -2221 5572 146 15 9 chr2 216397677 216397721 -36858862 - L1MA8 LINE L1 -6 6285 6243 1844 148 7 20 chr2 216397721 216398018 -36858565 - AluJo SINE Alu -13 299 7 5572 146 15 9 chr2 216398018 216399227 -36857356 - L1MA8 LINE L1 -48 6243 5023 245 278 28 0 chr2 216399404 216399476 -36857107 + L2 LINE L2 1876 1949 -1365 1837 219 61 55 chr2 216399493 216400181 -36856402 - L1MC4 LINE L1 -2 8040 7349 879 258 53 54 chr2 216400171 216400592 -36855991 - L1MC4 LINE L1 -974 6834 6444 * 894 326 98 42 chr2 216400612 216401096 -36855487 + L2 LINE L2 1987 2519 -795 1809 174 0 23 chr2 216401096 216401406 -36855177 + AluSx SINE Alu 1 303 -9 894 326 98 42 chr2 216401406 216401572 -36855011 + L2 LINE L2 2519 2674 -640 644 278 129 58 chr2 216401641 216402091 -36854492 + L2 LINE L2 2832 3313 0 1027 266 38 65 chr2 216402764 216403369 -36853214 - L2 LINE L2 -15 3298 2704 207 0 0 0 chr2 216403369 216403392 -36853191 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 993 77 0 0 chr2 216403849 216403979 -36852604 - L1PA8 LINE L1 -7 6165 6036 7355 106 22 2 chr2 216403979 216405124 -36851459 + L1P LINE L1 3810 4977 -1169 1911 190 46 12 chr2 216405157 216405568 -36851015 - MSTB1 LTR MaLR 0 432 8 1871 279 69 27 chr2 216405568 216406261 -36850322 - L2 LINE L2 -621 2693 1972 1637 146 35 107 chr2 216406261 216406330 -36850253 + MLT1A1 LTR MaLR 1 73 -301 2359 151 56 2 chr2 216406330 216406740 -36849843 - MSTB1 LTR MaLR 0 432 1 1637 146 35 107 chr2 216406740 216407073 -36849510 + MLT1A1 LTR MaLR 73 374 0 403 211 0 61 chr2 216407073 216407187 -36849396 - L2 LINE L2 -1338 1976 1870 975 181 5 70 chr2 216407806 216407951 -36848632 + MER5A DNA MER1_type 1 131 -58 2205 134 0 0 chr2 216407951 216408258 -36848325 - AluSx SINE Alu -5 307 1 975 181 5 70 chr2 216408258 216408311 -36848272 + MER5A DNA MER1_type 131 186 -3 1660 189 3 30 chr2 216408431 216408732 -36847851 + AluJo SINE Alu 1 293 -19 388 279 123 64 chr2 216408851 216409259 -36847324 - MLT1L LTR MaLR -19 596 165 238 284 14 0 chr2 216409300 216409374 -36847209 - MLT1L LTR MaLR -540 75 1 2306 115 22 25 chr2 216409670 216410035 -36846548 - THE1B LTR MaLR 0 364 1 1655 190 14 3 chr2 216412510 216412800 -36843783 + AluJb SINE Alu 1 293 -19 2603 134 25 30 chr2 216413505 216413939 -36842644 - Tigger2a DNA MER2_type 0 434 3 356 248 16 40 chr2 216414559 216414684 -36841899 + MER112 DNA MER1_type 1 122 -138 3106 89 20 11 chr2 216414691 216415131 -36841452 + MLT2A1 LTR ERVL 1 444 0 8199 64 12 17 chr2 216415131 216416088 -36840495 + HERVL-A1 LTR ERVL 1 954 -4700 2388 82 16 13 chr2 216416088 216416391 -36840192 - AluY SINE Alu -7 304 1 8199 64 12 17 chr2 216416391 216416554 -36840029 + HERVL-A1 LTR ERVL 954 1116 -4538 874 335 80 15 chr2 216416558 216417086 -36839497 + L2 LINE L2 1839 2400 -914 363 304 61 0 chr2 216417647 216417762 -36838821 + L2 LINE L2 3151 3272 0 2003 137 0 0 chr2 216418021 216418299 -36838284 + AluSg SINE Alu 1 278 -32 252 0 0 0 chr2 216418299 216418327 -36838256 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 1447 208 50 28 chr2 216418337 216418760 -36837823 + MLT1C LTR MaLR 34 465 -2 2326 99 20 0 chr2 216419101 216419403 -36837180 - AluSp SINE Alu -4 309 2 21 36 0 0 chr2 216419541 216419569 -36837014 + AT_rich Low_complexity Low_complexity 1 28 0 207 0 0 0 chr2 216420542 216420565 -36836018 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2099 121 0 3 chr2 216421475 216421772 -36834811 + AluSc SINE Alu 1 296 -13 279 342 167 18 chr2 216421920 216422262 -36834321 + L2 LINE L2 2921 3313 0 1760 136 86 21 chr2 216422937 216423276 -36833307 - MER46B DNA MER2_type 0 236 1 406 250 35 62 chr2 216423609 216423753 -36832830 - MIR SINE MIR -17 245 106 271 246 18 0 chr2 216423748 216423805 -36832778 + MIR SINE MIR 97 154 -108 * 303 313 12 0 chr2 216423822 216423902 -36832681 - MIR SINE MIR -168 94 14 21 57 0 0 chr2 216424474 216424509 -36832074 + AT_rich Low_complexity Low_complexity 1 35 0 245 207 0 17 chr2 216424770 216424828 -36831755 + GA-rich Low_complexity Low_complexity 1 57 0 193 154 92 62 chr2 216424890 216424955 -36831628 + MIR SINE MIR 93 159 -103 292 265 153 46 chr2 216424967 216425163 -36831420 - L2 LINE L2 -6 3307 3091 24 32 0 0 chr2 216425218 216425249 -36831334 + AT_rich Low_complexity Low_complexity 1 31 0 235 193 0 35 chr2 216425468 216425525 -36831058 - MLT1L LTR MaLR -221 394 340 989 283 44 65 chr2 216426187 216426676 -36829907 + MLT1K LTR MaLR 53 532 -56 719 185 48 7 chr2 216426676 216426822 -36829761 - FRAM SINE Alu -13 153 2 989 283 44 65 chr2 216426822 216426872 -36829711 + MLT1K LTR MaLR 532 581 -7 791 224 22 22 chr2 216427862 216428041 -36828542 - MIR SINE MIR -21 241 63 25 65 0 0 chr2 216428137 216428183 -36828400 + AT_rich Low_complexity Low_complexity 1 46 0 21 57 0 0 chr2 216429642 216429677 -36826906 + AT_rich Low_complexity Low_complexity 1 35 0 266 167 0 15 chr2 216429749 216429815 -36826768 + GA-rich Low_complexity Low_complexity 1 65 0 252 271 0 0 chr2 216430103 216430162 -36826421 + (CATATA)n Simple_repeat Simple_repeat 6 64 0 1168 304 66 21 chr2 216431500 216431861 -36824722 + HERV16 LTR ERVL 787 1181 -3815 2251 117 0 0 chr2 216431861 216432168 -36824415 + AluSq SINE Alu 2 308 -5 1168 304 66 21 chr2 216432168 216432336 -36824247 + HERV16 LTR ERVL 1181 1340 -3656 3964 99 0 0 chr2 216432352 216432915 -36823668 - L1PA13 LINE L1 0 6163 5601 1169 107 0 0 chr2 216432916 216433093 -36823490 - L1PA13 LINE L1 -612 5551 5375 1078 300 64 44 chr2 216433499 216433935 -36822648 + LTR16A LTR ERVL 1 437 -13 279 323 191 27 chr2 216434776 216434980 -36821603 - L2 LINE L2 -788 2526 2357 366 80 0 0 chr2 216434980 216435030 -36821553 + (TATATG)n Simple_repeat Simple_repeat 2 51 0 279 323 191 27 chr2 216435030 216435119 -36821464 - L2 LINE L2 -957 2357 2185 1836 331 87 60 chr2 216435243 216437068 -36819515 + L2 LINE L2 1006 2880 -434 2009 155 3 0 chr2 216437393 216437689 -36818894 + AluJb SINE Alu 1 297 -15 328 352 158 0 chr2 216437709 216437905 -36818678 - L2 LINE L2 -1333 1981 1755 276 403 28 20 chr2 216437915 216438163 -36818420 + L2 LINE L2 2608 2857 -457 253 307 88 0 chr2 216438399 216438513 -36818070 + L2 LINE L2 3186 3309 -4 2306 78 51 0 chr2 216439369 216439662 -36816921 + AluSx SINE Alu 1 308 -4 322 324 72 14 chr2 216441230 216441369 -36815214 - L2 LINE L2 -280 2992 2846 483 305 68 21 chr2 216441411 216441647 -36814936 - L2 LINE L2 -438 2876 2630 2013 130 3 0 chr2 216441795 216442080 -36814503 + AluJb SINE Alu 1 286 -26 22 0 0 0 chr2 216442080 216442102 -36814481 + AT_rich Low_complexity Low_complexity 1 22 0 181 355 21 21 chr2 216442674 216442767 -36813816 + MIR SINE MIR 47 139 -69 2306 59 45 0 chr2 216443838 216444124 -36812459 + AluY SINE Alu 1 299 -12 340 279 36 27 chr2 216444424 216444535 -36812048 + MIR3 SINE MIR 91 202 -6 214 186 0 0 chr2 216444812 216444855 -36811728 + (TA)n Simple_repeat Simple_repeat 2 44 0 1239 141 95 125 chr2 216444910 216445214 -36811369 + AluJo SINE Alu 1 295 -17 1168 193 0 0 chr2 216445882 216446089 -36810494 + Tigger5 DNA MER2_type 7 213 -2110 1371 133 9 4 chr2 216446097 216446330 -36810253 + Tigger5 DNA MER2_type 2090 2323 0 2395 92 0 3 chr2 216446409 216446714 -36809869 + AluSq SINE Alu 1 304 -9 310 226 122 9 chr2 216447789 216447904 -36808679 - L1ME3A LINE L1 0 6170 6043 3096 153 50 36 chr2 216448120 216448681 -36807902 - L1MB1 LINE L1 0 6168 5600 2412 144 0 52 chr2 216448694 216449139 -36807444 - L1MB1 LINE L1 -2215 3931 3510 1942 111 42 33 chr2 216449145 216449478 -36807105 - L1M3 LINE L1 -552 5852 5517 26 0 0 0 chr2 216449504 216449530 -36807053 + AT_rich Low_complexity Low_complexity 1 26 0 11955 209 116 21 chr2 216449611 216452048 -36804535 - L1M3 LINE L1 -856 5526 3320 1842 113 158 0 chr2 216452048 216452339 -36804244 + MER1B DNA MER1_type 1 337 0 11955 209 116 21 chr2 216452339 216452740 -36803843 - L1M3 LINE L1 -3062 3320 2958 1909 144 78 36 chr2 216452740 216453100 -36803483 - THE1C LTR MaLR 0 375 1 11955 209 116 21 chr2 216453100 216454679 -36801904 - L1M3 LINE L1 -3424 2958 777 2490 80 0 3 chr2 216454681 216454992 -36801591 - AluSq SINE Alu -3 310 1 207 114 0 0 chr2 216455032 216455067 -36801516 + (T)n Simple_repeat Simple_repeat 1 35 0 690 302 123 75 chr2 216455268 216455808 -36800775 - L1M3d LINE L1 -5297 834 27 1015 236 31 9 chr2 216456030 216456255 -36800328 + MIR SINE MIR 7 236 -26 191 355 132 25 chr2 216456699 216456820 -36799763 + L2 LINE L2 3122 3255 -17 1320 161 14 18 chr2 216457188 216457406 -36799177 + MER20 DNA MER1_type 2 218 -1 2312 133 40 14 chr2 216458317 216458670 -36797913 - THE1B LTR MaLR -2 362 1 340 333 86 28 chr2 216458722 216458977 -36797606 - L2 LINE L2 -189 3083 2814 203 306 28 46 chr2 216459471 216459579 -36797004 + MIR SINE MIR 31 136 -126 622 274 53 18 chr2 216459715 216459941 -36796642 + MIR SINE MIR 3 236 -26 425 313 174 0 chr2 216460941 216461085 -36795498 + MIR3 SINE MIR 3 171 -37 28 71 0 0 chr2 216461209 216461265 -36795318 + AT_rich Low_complexity Low_complexity 1 56 0 233 289 0 105 chr2 216461659 216461773 -36794810 + MIR SINE MIR 158 259 -3 1804 169 13 7 chr2 216461828 216462136 -36794447 + AluJb SINE Alu 1 310 -2 208 286 186 0 chr2 216465969 216466039 -36790544 - L2 LINE L2 -35 3237 3155 230 244 125 74 chr2 216466104 216466280 -36790303 - MIR SINE MIR -25 237 53 2200 110 7 3 chr2 216466319 216466627 -36789956 + AluSc SINE Alu 1 309 0 339 292 0 22 chr2 216466689 216466778 -36789805 - MIR3 SINE MIR -11 197 111 241 325 12 0 chr2 216466855 216466938 -36789645 + MIR SINE MIR 41 124 -84 396 265 114 38 chr2 216467180 216467391 -36789192 + L1ME LINE L1 5353 5579 -542 671 198 22 57 chr2 216467418 216467611 -36788972 - L1MA10 LINE L1 -7 6327 5970 24 0 0 0 chr2 216467763 216467787 -36788796 + AT_rich Low_complexity Low_complexity 1 24 0 730 196 0 53 chr2 216467787 216467920 -36788663 - FLAM_A SINE Alu -7 126 1 2203 92 3 3 chr2 216468616 216468909 -36787674 - AluY SINE Alu -18 293 1 238 337 22 11 chr2 216468985 216469077 -36787506 + LTR67 LTR ERVL 97 189 -368 1910 166 3 10 chr2 216469601 216469909 -36786674 + AluJb SINE Alu 1 306 -6 2458 83 0 0 chr2 216470293 216470595 -36785988 + AluY SINE Alu 1 302 -9 21 0 0 0 chr2 216470601 216470622 -36785961 + AT_rich Low_complexity Low_complexity 1 21 0 2025 156 22 6 chr2 216471376 216471734 -36784849 - L1MB3 LINE L1 0 6183 5820 690 156 63 14 chr2 216471740 216471933 -36784650 + AluJ SINE Alu 34 299 -13 493 122 82 20 chr2 216471933 216472031 -36784552 - L1MB3 LINE L1 -344 5827 5724 450 0 0 0 chr2 216472036 216472086 -36784497 + (TG)n Simple_repeat Simple_repeat 2 51 0 303 198 55 66 chr2 216472274 216472365 -36784218 - MARNA DNA Mariner -228 358 269 744 269 25 29 chr2 216472368 216472613 -36783970 - MIR SINE MIR 0 262 19 566 266 48 108 chr2 216472799 216473171 -36783412 - MER34 LTR ERV1 -29 513 164 444 270 92 7 chr2 216473378 216473530 -36783053 - MARNA DNA Mariner -352 234 70 333 256 94 17 chr2 216473633 216473750 -36782833 + MIR SINE MIR 77 202 -60 245 211 178 33 chr2 216475069 216475159 -36781424 - MIR SINE MIR -19 243 141 342 304 58 16 chr2 216475409 216475560 -36781023 - MIR SINE MIR -65 197 35 509 0 16 0 chr2 216477659 216477720 -36778863 + (TG)n Simple_repeat Simple_repeat 2 63 0 766 264 81 33 chr2 216478154 216478427 -36778156 - MARNA DNA Mariner -211 375 90 233 250 36 0 chr2 216478516 216478572 -36778011 - MIR SINE MIR -93 169 112 196 286 41 0 chr2 216478558 216478607 -36777976 + MIR SINE MIR 57 107 -155 * 354 273 51 80 chr2 216478833 216478929 -36777654 + MIR3 SINE MIR 2 92 -116 1827 153 21 7 chr2 216478929 216479217 -36777366 + AluJb SINE Alu 19 310 -2 354 273 51 80 chr2 216479217 216479296 -36777287 + MIR3 SINE MIR 92 172 -36 1626 67 5 19 chr2 216480005 216480214 -36776369 - AluSp SINE Alu -15 298 93 3561 62 4 9 chr2 216480216 216480666 -36775917 - LTR7 LTR ERV1 -2 448 1 2589 76 45 13 chr2 216480666 216481046 -36775537 - HERVH LTR ERV1 0 7713 7322 1293 129 22 44 chr2 216481044 216481269 -36775314 - HERVH LTR ERV1 -1894 5819 5600 * 4356 143 9 1 chr2 216481270 216481927 -36774656 - HERVH LTR ERV1 -2564 5149 4488 3402 115 2 6 chr2 216481929 216482433 -36774150 - HERVH LTR ERV1 -3720 3993 3492 989 120 7 0 chr2 216482423 216482573 -36774010 - HERVH LTR ERV1 -4423 3290 3140 * 21038 88 13 15 chr2 216482552 216485551 -36771032 - HERVH LTR ERV1 -4718 2995 1 3677 58 0 7 chr2 216485553 216486004 -36770579 - LTR7 LTR ERV1 -2 448 1 723 61 0 0 chr2 216486004 216486086 -36770497 - AluSp SINE Alu -215 97 16 336 314 51 51 chr2 216487188 216487344 -36769239 - MIR SINE MIR -56 206 51 222 32 129 0 chr2 216487657 216487719 -36768864 + T-rich Low_complexity Low_complexity 2 71 0 21 0 0 0 chr2 216488343 216488364 -36768219 + AT_rich Low_complexity Low_complexity 1 21 0 462 301 69 30 chr2 216488789 216488992 -36767591 + MIR SINE MIR 20 230 -32 1713 185 60 30 chr2 216488993 216489403 -36767180 - MLT1D LTR MaLR 0 505 88 2268 244 31 7 chr2 216489408 216490011 -36766572 - L1M4 LINE L1 -1474 4672 4055 416 174 50 110 chr2 216490012 216490139 -36766444 - MLT1D LTR MaLR -396 109 3 2121 51 0 16 chr2 216490510 216490766 -36765817 + AluY SINE Alu 1 252 -59 21 0 0 0 chr2 216490766 216490787 -36765796 + AT_rich Low_complexity Low_complexity 1 21 0 271 342 204 5 chr2 216490980 216491176 -36765407 + L3b LINE CR1 1293 1527 -56 600 210 58 103 chr2 216492500 216492574 -36764009 + MIR SINE MIR 31 107 -155 708 195 31 8 chr2 216492574 216492702 -36763881 + MER94 DNA DNA 2 132 -2 600 210 58 103 chr2 216492702 216492870 -36763713 + MIR SINE MIR 107 262 0 189 227 0 23 chr2 216493736 216493780 -36762803 - L2 LINE L2 -4 3309 3267 350 291 174 55 chr2 216493819 216494238 -36762345 + MLT1H LTR MaLR 1 469 -80 235 278 49 93 chr2 216494565 216494727 -36761856 - L2 LINE L2 0 3313 3159 328 318 127 40 chr2 216495139 216495312 -36761271 + MIR3 SINE MIR 6 193 -15 464 235 135 16 chr2 216495496 216495664 -36760919 + MIR SINE MIR 20 205 -57 246 287 85 23 chr2 216495956 216496085 -36760498 + MLT1J LTR MaLR 11 147 -364 605 238 104 36 chr2 216496178 216496371 -36760212 + MLT1J LTR MaLR 305 510 -1 258 318 103 72 chr2 216496573 216496938 -36759645 - L2 LINE L2 -188 3084 2732 270 0 0 0 chr2 216496938 216496968 -36759615 + (TA)n Simple_repeat Simple_repeat 2 31 0 1830 30 0 0 chr2 216496969 216497172 -36759411 - L1PA5 LINE L1 0 6154 5952 258 318 103 72 chr2 216497172 216497422 -36759161 - L2 LINE L2 -539 2733 2410 533 247 154 78 chr2 216498595 216499068 -36757515 - MLT1J LTR MaLR -2 509 1 1774 125 7 63 chr2 216499909 216500212 -36756371 - AluJb SINE Alu -25 287 2 180 0 0 0 chr2 216500263 216500283 -36756300 + (T)n Simple_repeat Simple_repeat 1 20 0 283 287 89 20 chr2 216500299 216500400 -36756183 + L2 LINE L2 3138 3245 -27 817 332 194 28 chr2 216500732 216501899 -36754684 + L2 LINE L2 1618 2977 -337 279 314 10 20 chr2 216501922 216502024 -36754559 - L2 LINE L2 -1 3312 3212 573 194 33 0 chr2 216502368 216502495 -36754088 + L1MB1 LINE L1 6021 6139 -50 2597 65 10 0 chr2 216502507 216502815 -36753768 - AluY SINE Alu 0 311 1 1141 265 91 58 chr2 216502956 216503526 -36753057 - L2 LINE L2 -691 2623 2035 1126 204 0 26 chr2 216503562 216503793 -36752790 + AluJo SINE Alu 86 310 -2 395 171 0 12 chr2 216503793 216503875 -36752708 + GA-rich Low_complexity Low_complexity 2 82 0 840 94 31 0 chr2 216504327 216504455 -36752128 - L1MA9 LINE L1 -5 6307 6176 394 161 46 0 chr2 216504458 216504545 -36752038 + L1M3 LINE L1 5664 5754 -580 325 261 27 65 chr2 216506680 216506870 -36749713 - MER5B DNA MER1_type 0 178 1 444 293 103 6 chr2 216506895 216507069 -36749514 - LTR16A LTR ERVL 0 450 260 314 277 27 40 chr2 216507140 216507288 -36749295 - LTR16A LTR ERVL -287 163 18 2231 318 67 22 chr2 216507443 216508589 -36747994 - HERV16 LTR ERVL -3435 1561 364 287 309 159 5 chr2 216508639 216508846 -36747737 - HERV16 LTR ERVL -4754 242 4 709 276 86 42 chr2 216508884 216509243 -36747340 - LTR16A LTR ERVL -75 375 1 264 125 0 0 chr2 216509722 216509762 -36746821 - HsTC2 DNA Tc2 -1824 74 35 270 161 0 16 chr2 216510485 216510547 -36746036 - L1ME4a LINE L1 -2 6119 6059 234 0 0 0 chr2 216510657 216510683 -36745900 + (CA)n Simple_repeat Simple_repeat 2 27 0 5371 113 22 22 chr2 216512170 216513449 -36743134 - L1PA13 LINE L1 0 6163 4870 313 258 0 40 chr2 216513709 216513833 -36742750 - L1ME LINE L1 -321 5800 5682 543 304 124 33 chr2 216513834 216514285 -36742298 - L1ME LINE L1 -795 5351 4860 232 204 148 0 chr2 216514361 216514449 -36742134 + MLT1J LTR MaLR 100 200 -311 551 300 55 6 chr2 216514694 216515024 -36741559 - L1ME LINE L1 -1310 4836 4491 585 183 17 8 chr2 216515298 216515418 -36741165 + MER20 DNA MER1_type 1 121 -98 539 174 0 18 chr2 216515456 216515565 -36741018 - FRAM SINE Alu -5 171 65 925 281 94 22 chr2 216515841 216516342 -36740241 - L1ME4a LINE L1 -304 5866 5330 1410 197 0 19 chr2 216516343 216516612 -36739971 - AluJo SINE Alu -7 305 42 236 289 70 0 chr2 216516640 216516768 -36739815 - L1ME4a LINE L1 -831 5315 5179 693 287 45 31 chr2 216516894 216517316 -36739267 - L1ME4a LINE L1 -1183 4963 4536 27 73 0 0 chr2 216517330 216517385 -36739198 + AT_rich Low_complexity Low_complexity 1 55 0 374 270 25 51 chr2 216517894 216518131 -36738452 - L1MC4 LINE L1 -29 8013 7783 2432 82 0 0 chr2 216518827 216519130 -36737453 + AluSg SINE Alu 1 303 -7 902 263 23 0 chr2 216519491 216519708 -36736875 + MIR SINE MIR 7 228 -34 487 278 126 46 chr2 216519745 216520137 -36736446 + L2 LINE L2 2645 3069 -203 228 167 24 0 chr2 216520415 216520457 -36736126 - MER5A DNA MER1_type -61 128 86 * 633 284 61 38 chr2 216520435 216520849 -36735734 - L2 LINE L2 -244 3069 2649 837 172 0 8 chr2 216522103 216522237 -36734346 + FLAM_C SINE Alu 1 133 -10 241 261 60 121 chr2 216522449 216522698 -36733885 + L2 LINE L2 3039 3272 0 2296 136 6 9 chr2 216523125 216523463 -36733120 - MER1B DNA MER1_type 0 337 1 209 342 108 18 chr2 216523463 216523574 -36733009 + L2 LINE L2 3122 3242 -71 225 0 0 0 chr2 216523707 216523732 -36732851 + (A)n Simple_repeat Simple_repeat 1 25 0 195 283 141 33 chr2 216523760 216523852 -36732731 - MIR SINE MIR -67 141 40 488 293 58 33 chr2 216524641 216524883 -36731700 + MER112 DNA MER1_type 1 248 -12 1784 266 67 2 chr2 216524896 216525407 -36731176 - MLT1H1 LTR MaLR 0 555 12 629 231 64 44 chr2 216525544 216525795 -36730788 + MER112 DNA MER1_type 1 256 0 3368 113 8 14 chr2 216526557 216527061 -36729522 + MER1A DNA MER1_type 29 529 0 1336 213 31 12 chr2 216527506 216527826 -36728757 - MER58B DNA MER1_type -15 326 1 23 33 0 0 chr2 216528150 216528180 -36728403 + AT_rich Low_complexity Low_complexity 1 30 0 2777 109 60 10 chr2 216528193 216528677 -36727906 + L1MB3 LINE L1 5675 6182 -1 233 248 248 0 chr2 216528876 216528981 -36727602 - MIR SINE MIR -120 142 12 409 255 69 62 chr2 216529312 216529457 -36727126 + L2 LINE L2 3127 3272 0 192 179 0 0 chr2 216529938 216529977 -36726606 + CT-rich Low_complexity Low_complexity 3 41 0 221 289 10 41 chr2 216530359 216530456 -36726127 - MIR SINE MIR 0 262 169 640 244 66 36 chr2 216530589 216530802 -36725781 + MIR SINE MIR 45 261 -1 321 333 0 18 chr2 216530803 216530917 -36725666 - MIR SINE MIR -138 124 13 2035 147 44 33 chr2 216531645 216532005 -36724578 + THE1B LTR MaLR 1 364 0 2334 132 25 59 chr2 216533401 216533599 -36722984 + MSTC LTR MaLR 1 204 -224 4669 70 8 2 chr2 216533599 216534202 -36722381 - L1PA10 LINE L1 -13 6155 5549 2334 132 25 59 chr2 216534202 216534444 -36722139 + MSTC LTR MaLR 204 426 -2 185 310 0 42 chr2 216534727 216534798 -36721785 + L2 LINE L2 2997 3064 -208 252 0 0 0 chr2 216535045 216535073 -36721510 + (TA)n Simple_repeat Simple_repeat 2 29 0 2624 30 0 3 chr2 216537859 216538160 -36718423 + AluY SINE Alu 2 301 -10 1955 110 46 3 chr2 216538397 216538527 -36718056 + AluSq SINE Alu 1 124 -189 189 0 0 0 chr2 216538527 216538548 -36718035 + (TAA)n Simple_repeat Simple_repeat 2 22 0 1955 110 46 3 chr2 216538548 216538699 -36717884 + AluSq SINE Alu 124 294 -19 422 358 73 0 chr2 216539106 216539285 -36717298 + MIR SINE MIR 58 249 -13 196 304 13 51 chr2 216539477 216539556 -36717027 + L2 LINE L2 3234 3309 -4 213 162 44 88 chr2 216540462 216540530 -36716053 - MER5B DNA MER1_type -17 161 97 393 252 84 25 chr2 216540885 216541004 -36715579 + MIR3 SINE MIR 14 139 -69 940 306 84 18 chr2 216541181 216541619 -36714964 + MLT1K LTR MaLR 122 588 0 257 209 162 38 chr2 216541622 216541727 -36714856 - MIR SINE MIR -61 147 30 456 323 40 10 chr2 216543205 216543403 -36713180 - MIR SINE MIR -54 208 5 418 70 0 0 chr2 216543424 216543481 -36713102 + L1PA10 LINE L1 6099 6155 -13 445 240 206 0 chr2 216543507 216543653 -36712930 - MIR SINE MIR -27 235 60 193 346 39 29 chr2 216543665 216543769 -36712814 - L2 LINE L2 0 3272 3168 397 318 20 7 chr2 216544772 216544920 -36711663 + MIR SINE MIR 70 219 -43 2205 150 5 38 chr2 216544976 216545375 -36711208 + MSTC LTR MaLR 1 386 -42 2303 88 3 28 chr2 216545913 216546231 -36710352 + AluSp SINE Alu 1 310 -3 465 241 253 20 chr2 216547687 216547940 -36708643 + MER102a DNA MER1_type 5 316 -14 230 229 0 0 chr2 216548450 216548498 -36708085 - L2 LINE L2 -73 3240 3193 279 290 115 35 chr2 216548618 216548904 -36707679 + L1ME4a LINE L1 5354 5662 -459 324 382 58 0 chr2 216549174 216549381 -36707202 + L1ME4a LINE L1 5708 5926 -195 407 238 81 41 chr2 216549690 216549862 -36706721 + MIR3 SINE MIR 30 208 0 1785 64 27 0 chr2 216550676 216550895 -36705688 + AluY SINE Alu 1 225 -86 346 343 39 24 chr2 216551720 216551927 -36704656 + MIR SINE MIR 42 251 -11 2082 118 0 51 chr2 216551955 216552269 -36704314 - AluSx SINE Alu -14 298 1 5527 189 46 17 chr2 216552392 216552855 -36703728 - L1MA9 LINE L1 -38 6274 5826 264 59 0 0 chr2 216552855 216552889 -36703694 + (TG)n Simple_repeat Simple_repeat 2 35 0 5527 189 46 17 chr2 216552889 216554591 -36701992 - L1MA9 LINE L1 -486 5826 4048 220 398 37 6 chr2 216554596 216554757 -36701826 + MIR SINE MIR 58 223 -39 26 0 0 0 chr2 216556797 216556823 -36699760 + AT_rich Low_complexity Low_complexity 1 26 0 246 240 29 99 chr2 216556966 216557111 -36699472 - MIR SINE MIR -65 143 16 1936 112 3 21 chr2 216557526 216557812 -36698771 + AluSx SINE Alu 1 281 -31 213 39 0 0 chr2 216557815 216557841 -36698742 + (TAA)n Simple_repeat Simple_repeat 2 27 0 277 221 44 0 chr2 216557977 216558045 -36698538 + LTR50 LTR ERVL 725 795 0 296 202 173 29 chr2 216558686 216558790 -36697793 + L2 LINE L2 3180 3298 -15 230 258 0 45 chr2 216558885 216558951 -36697632 - MER5A DNA MER1_type -119 70 8 803 211 24 0 chr2 216560943 216561109 -36695474 + MER5A DNA MER1_type 1 170 -19 361 283 249 0 chr2 216561693 216561870 -36694713 + HAL1 LINE L1 2057 2277 -230 1170 179 18 48 chr2 216561870 216562099 -36694484 + AluJb SINE Alu 85 306 -6 3570 125 25 35 chr2 216562589 216562717 -36693866 - L1PA15 LINE L1 -5 6160 6032 288 0 0 0 chr2 216562717 216562749 -36693834 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1844 173 0 0 chr2 216562749 216563032 -36693551 - AluSx SINE Alu -29 283 1 3570 125 25 35 chr2 216563032 216563510 -36693073 - L1PA15 LINE L1 -131 6034 5559 1993 129 55 27 chr2 216563510 216563875 -36692708 - THE1C LTR MaLR 0 375 1 1306 229 74 20 chr2 216563956 216564309 -36692274 + MLT1A2 LTR MaLR 3 374 0 434 303 26 20 chr2 216564329 216564481 -36692102 - MER20B DNA MER1_type -605 178 26 1839 242 83 23 chr2 216565112 216565924 -36690659 - L1ME2 LINE L1 -116 6048 5188 6652 135 17 1 chr2 216565943 216567584 -36688999 - L1MA3 LINE L1 -13 6292 4630 6806 71 0 0 chr2 216567584 216568797 -36687786 - L1PA7 LINE L1 0 6154 4948 303 278 69 91 chr2 216569384 216569704 -36686879 + MLT1H LTR MaLR 109 421 -128 252 276 52 75 chr2 216570375 216570509 -36686074 + L2 LINE L2 3138 3268 -4 225 388 54 23 chr2 216571707 216571965 -36684618 + L2 LINE L2 2826 3091 -181 306 107 0 0 chr2 216572030 216572086 -36684497 + (TA)n Simple_repeat Simple_repeat 1 56 0 211 363 140 22 chr2 216574867 216575046 -36681537 + MIR SINE MIR 12 211 -51 3460 147 48 14 chr2 216575407 216576073 -36680510 + L1MB2 LINE L1 5480 6168 -3 1419 63 0 0 chr2 216577297 216577472 -36679111 - AluY SINE Alu -10 301 127 441 280 88 8 chr2 216577633 216577758 -36678825 - L2 LINE L2 0 3272 3138 230 357 24 56 chr2 216577954 216578080 -36678503 + L2 LINE L2 3138 3259 -13 1722 212 37 31 chr2 216578917 216579375 -36677208 - LTR40c LTR ERVL -1 464 4 307 256 0 0 chr2 216579391 216579469 -36677114 - MER116 DNA Mariner -2 78 1 285 209 189 34 chr2 216579968 216580037 -36676546 - MIR SINE MIR 0 262 205 4475 56 5 0 chr2 216580037 216580588 -36675995 - MER41A LTR ERV1 0 554 1 285 209 189 34 chr2 216580588 216580666 -36675917 - MIR SINE MIR -57 205 92 180 0 0 0 chr2 216580679 216580699 -36675884 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 1847 130 29 7 chr2 216580702 216580978 -36675605 - AluJo SINE Alu -30 282 1 2499 151 0 2 chr2 216581240 216581644 -36674939 - MER57A LTR ERV1 0 403 1 554 269 86 45 chr2 216581695 216581940 -36674643 + LTR16A1 LTR ERVL 199 453 -4 24 32 0 0 chr2 216582344 216582375 -36674208 + AT_rich Low_complexity Low_complexity 1 31 0 3523 151 54 25 chr2 216582889 216583596 -36672987 - LTR8A LTR ERV1 0 727 1 229 242 68 30 chr2 216584296 216584403 -36672180 + MER5A DNA MER1_type 4 114 -75 189 246 43 58 chr2 216584375 216584444 -36672139 - MER5A DNA MER1_type -114 75 8 * 639 199 149 7 chr2 216584435 216584576 -36672007 - MER5A DNA MER1_type -12 177 17 735 201 16 76 chr2 216584604 216584788 -36671795 - MER5A DNA MER1_type -1 188 16 205 257 0 29 chr2 216584880 216584950 -36671633 - L2 LINE L2 -81 3232 3165 2510 71 0 0 chr2 216585365 216585673 -36670910 + AluY SINE Alu 1 308 -3 414 307 167 85 chr2 216585740 216586212 -36670371 - MLT1K LTR MaLR -70 518 8 2401 87 0 3 chr2 216586212 216586511 -36670072 + AluSq SINE Alu 1 298 -15 658 298 35 0 chr2 216586817 216587015 -36669568 + MIR SINE MIR 17 221 -41 931 56 80 0 chr2 216588204 216588329 -36668254 + MER85 DNA T2_type 1 135 -4 2134 115 3 32 chr2 216588518 216588831 -36667752 + AluSx SINE Alu 1 304 -8 30248 109 16 14 chr2 216592536 216597407 -36659176 - L1P LINE L1 -1257 4889 11 11296 136 42 30 chr2 216597426 216599782 -36656801 - L1 LINE L1 -1512 6053 3725 2377 85 0 3 chr2 216599782 216600089 -36656494 + AluY SINE Alu 1 306 -5 11296 136 42 30 chr2 216600089 216601550 -36655033 - L1 LINE L1 -3840 3725 2169 7125 56 0 0 chr2 216601550 216602509 -36654074 - L1PA5 LINE L1 -1 6153 5199 11296 136 42 30 chr2 216602509 216603095 -36653488 - L1 LINE L1 -5396 2169 1591 375 253 99 47 chr2 216603254 216603466 -36653117 - LTR16A LTR ERVL -153 297 76 2120 228 72 79 chr2 216603591 216604804 -36651779 - L1MEc LINE L1 -1200 5741 4538 1868 87 7 11 chr2 216604815 216605091 -36651492 + L1MA2 LINE L1 5554 5828 -476 40661 34 22 2 chr2 216605092 216611107 -36645476 + L1PA2 LINE L1 13 6153 -2 2064 239 28 52 chr2 216611113 216611616 -36644967 + L1MA2 LINE L1 5814 6304 0 483 95 0 0 chr2 216611666 216611740 -36644843 + AluSp/q SINE Alu 229 302 -11 435 299 143 52 chr2 216611749 216611986 -36644597 - L1MEc LINE L1 -2479 4462 4175 2133 209 69 14 chr2 216611986 216612478 -36644105 + LTR40a LTR ERVL 1 519 0 435 299 143 52 chr2 216612478 216612624 -36643959 - L1MEc LINE L1 -2766 4175 4044 2445 227 77 51 chr2 216612648 216612711 -36643872 - L1MEc LINE L1 -2891 4050 3990 2147 132 0 3 chr2 216612711 216612999 -36643584 - AluSx SINE Alu -25 287 1 2445 227 77 51 chr2 216612999 216614391 -36642192 - L1MEc LINE L1 -2951 3990 2594 381 43 0 0 chr2 216614396 216614443 -36642140 + (TC)n Simple_repeat Simple_repeat 2 48 0 198 0 0 0 chr2 216614442 216614464 -36642119 + (TA)n Simple_repeat Simple_repeat 1 22 0 * 536 275 67 102 chr2 216614512 216614963 -36641620 - L1MEc LINE L1 -5967 456 22 482 269 32 38 chr2 216616112 216616298 -36640285 + L1MC4a LINE L1 5703 5887 -1921 22 56 0 0 chr2 216616473 216616509 -36640074 + AT_rich Low_complexity Low_complexity 1 36 0 2029 133 0 0 chr2 216616741 216617019 -36639564 - AluSx SINE Alu -8 304 27 266 353 63 11 chr2 216618087 216618277 -36638306 - L2 LINE L2 -1903 1411 1212 333 295 19 149 chr2 216618280 216618541 -36638042 + L2 LINE L2 3041 3267 -5 198 306 189 18 chr2 216619520 216619631 -36636952 - L2 LINE L2 -1 3271 3142 22 0 0 0 chr2 216619962 216619984 -36636599 + AT_rich Low_complexity Low_complexity 1 22 0 196 167 0 28 chr2 216620555 216620591 -36635992 - MIR SINE MIR -62 146 112 394 247 112 79 chr2 216620680 216620777 -36635806 + MIR SINE MIR 46 153 -109 2295 90 3 29 chr2 216620777 216621087 -36635496 + AluY SINE Alu 2 303 -8 394 247 112 79 chr2 216621087 216621167 -36635416 + MIR SINE MIR 153 229 -33 585 229 38 38 chr2 216621344 216621501 -36635082 - L2 LINE L2 -1 3312 3156 267 303 140 22 chr2 216622998 216623176 -36633407 + MIR SINE MIR 20 218 -44 975 199 151 14 chr2 216623578 216623930 -36632653 + LTR37A LTR ERV1 23 422 -4 24591 150 14 20 chr2 216624001 216628012 -36628571 + L1PA10 LINE L1 638 4605 -1563 2248 90 17 3 chr2 216628012 216628302 -36628281 + AluY SINE Alu 1 294 -17 24591 150 14 20 chr2 216628302 216629572 -36627011 + L1PA10 LINE L1 4605 5881 -287 213 246 355 9 chr2 216629614 216629724 -36626859 - MER5A DNA MER1_type -29 160 13 1492 160 20 92 chr2 216629755 216630148 -36626435 - MLT1A1 LTR MaLR 0 365 1 243 235 25 12 chr2 216630167 216630248 -36626335 + MIR SINE MIR 107 188 -74 21 36 0 0 chr2 216630694 216630722 -36625861 + AT_rich Low_complexity Low_complexity 1 28 0 700 237 51 19 chr2 216632198 216632413 -36624170 - LTR16B LTR ERVL 0 464 243 486 143 0 0 chr2 216632714 216632805 -36623778 + (TCCA)n Simple_repeat Simple_repeat 3 93 0 1187 250 86 27 chr2 216634695 216635103 -36621480 + L2 LINE L2 1786 2217 -1097 1268 231 38 101 chr2 216635110 216635535 -36621048 + MER21B LTR ERV1 1 398 -465 538 302 34 20 chr2 216635585 216635734 -36620849 + L2 LINE L2 3122 3272 0 519 268 68 41 chr2 216637184 216637404 -36619179 - L1ME LINE L1 -374 5747 5522 23 54 0 0 chr2 216637484 216637521 -36619062 + AT_rich Low_complexity Low_complexity 1 37 0 186 43 0 0 chr2 216637606 216637629 -36618954 + (TG)n Simple_repeat Simple_repeat 2 24 0 336 252 93 60 chr2 216638057 216638359 -36618224 + L1ME4a LINE L1 5588 5899 -222 23 0 0 0 chr2 216638369 216638392 -36618191 + AT_rich Low_complexity Low_complexity 1 23 0 25 51 0 0 chr2 216638631 216638670 -36617913 + AT_rich Low_complexity Low_complexity 1 39 0 854 276 77 50 chr2 216638858 216639419 -36617164 + L1ME4a LINE L1 5543 6118 -3 333 242 48 32 chr2 216640595 216640646 -36615937 + MIR SINE MIR 137 186 -76 965 43 29 0 chr2 216640646 216640785 -36615798 + (TAGA)n Simple_repeat Simple_repeat 2 144 0 333 242 48 32 chr2 216640785 216640857 -36615726 + MIR SINE MIR 186 262 0 385 259 60 0 chr2 216641086 216641202 -36615381 + MIR SINE MIR 140 262 0 23 0 0 0 chr2 216641378 216641401 -36615182 + AT_rich Low_complexity Low_complexity 1 23 0 29 47 0 0 chr2 216641689 216641732 -36614851 + AT_rich Low_complexity Low_complexity 1 43 0 545 282 7 0 chr2 216642014 216642156 -36614427 - MIR SINE MIR -10 252 110 207 269 0 0 chr2 216642325 216642377 -36614206 + L2 LINE L2 3262 3313 0 466 267 46 67 chr2 216642488 216642683 -36613900 + MIR SINE MIR 56 246 -16 1304 118 0 59 chr2 216642728 216642948 -36613635 + AluSp SINE Alu 100 306 -7 21 0 0 0 chr2 216642948 216642969 -36613614 + AT_rich Low_complexity Low_complexity 1 21 0 5471 232 40 21 chr2 216642994 216645466 -36611117 + L1MC1 LINE L1 3515 6055 -278 1622 208 10 0 chr2 216645466 216645759 -36610824 + AluJo SINE Alu 2 297 -15 5471 232 40 21 chr2 216645759 216646044 -36610539 + L1MC1 LINE L1 6055 6333 0 646 186 243 29 chr2 216646094 216646304 -36610279 + MIR SINE MIR 8 262 0 506 285 30 12 chr2 216646342 216646507 -36610076 - MIR SINE MIR -71 191 24 6746 55 19 6 chr2 216647154 216648074 -36608509 + L1PA6 LINE L1 5221 6152 -2 293 266 46 18 chr2 216648345 216648496 -36608087 - L1MC/D LINE L1 -462 5659 5533 553 275 35 0 chr2 216648637 216648796 -36607787 + MIR SINE MIR 31 196 -66 2268 92 3 7 chr2 216649104 216649396 -36607187 - AluSg1 SINE Alu -18 291 1 2478 115 3 14 chr2 216649740 216650106 -36606477 - THE1B LTR MaLR 0 364 3 10849 103 30 8 chr2 216650107 216651654 -36604929 - THE1B-int LTR MaLR 0 1580 1 2342 111 35 16 chr2 216651654 216652022 -36604561 - THE1C LTR MaLR 0 375 1 29 78 0 0 chr2 216652876 216652940 -36603643 + AT_rich Low_complexity Low_complexity 1 64 0 397 318 8 16 chr2 216652958 216653084 -36603499 - MIR3 SINE MIR -54 154 30 556 264 39 39 chr2 216653170 216653348 -36603235 - MER5B DNA MER1_type 0 178 1 774 238 11 26 chr2 216653356 216653397 -36603186 + MER5A DNA MER1_type 1 41 -148 180 0 0 0 chr2 216653397 216653417 -36603166 + (CAG)n Simple_repeat Simple_repeat 1 20 0 774 238 11 26 chr2 216653417 216653564 -36603019 + MER5A DNA MER1_type 41 186 -3 266 57 0 0 chr2 216653575 216653610 -36602973 - U2 snRNA snRNA -153 35 1 427 99 14 56 chr2 216653617 216653688 -36602895 - MER5A DNA MER1_type -120 69 2 2244 101 3 0 chr2 216654080 216654377 -36602206 + AluY SINE Alu 4 301 -10 466 281 108 16 chr2 216655629 216655710 -36600873 + MIR SINE MIR 20 92 -170 2545 87 3 0 chr2 216655710 216656022 -36600561 - AluSp SINE Alu 0 313 1 466 281 108 16 chr2 216656022 216656125 -36600458 + MIR SINE MIR 92 221 -41 396 224 13 0 chr2 216656388 216656464 -36600119 + MER5A DNA MER1_type 112 188 -1 198 309 12 48 chr2 216656390 216656474 -36600109 - MER5A DNA MER1_type -102 87 7 * 622 317 54 12 chr2 216658369 216658609 -36597974 + MIR SINE MIR 13 262 0 733 98 18 18 chr2 216658791 216658903 -36597680 + AluY SINE Alu 1 112 -199 783 256 146 22 chr2 216659144 216659508 -36597075 + MLT1I LTR MaLR 1 409 0 2701 77 8 8 chr2 216659694 216660058 -36596525 + THE1B LTR MaLR 1 364 0 639 313 69 5 chr2 216660093 216660310 -36596273 + MIR SINE MIR 30 260 -2 908 258 72 138 chr2 216660313 216661215 -36595368 - L3 LINE CR1 -106 1471 629 811 181 0 31 chr2 216661421 216661581 -36595002 - LTR32 LTR ERVL 0 471 317 1481 190 30 0 chr2 216661633 216661928 -36594655 - LTR32 LTR ERVL -155 316 13 239 125 42 0 chr2 216662208 216662256 -36594327 - AluSx SINE Alu -1 301 252 1445 132 0 0 chr2 216662258 216662447 -36594136 - AluSx SINE Alu -123 189 1 669 243 63 8 chr2 216662665 216662920 -36593663 - LTR16A1 LTR ERVL 0 457 189 21 0 0 0 chr2 216663193 216663214 -36593369 + AT_rich Low_complexity Low_complexity 1 21 0 442 305 78 39 chr2 216663345 216663901 -36592682 + MLT1K LTR MaLR 34 586 -2 28 29 0 0 chr2 216664663 216664698 -36591885 + AT_rich Low_complexity Low_complexity 1 35 0 254 222 28 14 chr2 216665562 216665634 -36590949 - MLT1K LTR MaLR -325 263 191 488 278 83 18 chr2 216666291 216666460 -36590123 - MIR SINE MIR -10 252 73 182 342 25 13 chr2 216666609 216666688 -36589895 + MIR SINE MIR 53 132 -76 441 301 34 51 chr2 216667129 216667305 -36589278 + MIR3 SINE MIR 23 195 -13 629 299 20 10 chr2 216667815 216668012 -36588571 + MIR SINE MIR 53 251 -11 2083 123 118 59 chr2 216668542 216668878 -36587705 + MSTB1 LTR MaLR 2 368 -64 2448 90 0 6 chr2 216668878 216669190 -36587393 - AluY SINE Alu -1 310 1 2083 123 118 59 chr2 216669190 216669260 -36587323 + MSTB1 LTR MaLR 368 432 0 716 281 50 23 chr2 216669293 216669553 -36587030 - MER102a DNA MER1_type -2 328 62 770 316 50 16 chr2 216669744 216670120 -36586463 + L1MEc LINE L1 37 425 -5971 399 20 0 0 chr2 216670318 216670368 -36586215 - MADE1 DNA Mariner -30 50 1 385 281 85 9 chr2 216670456 216670797 -36585786 + L1MEc LINE L1 664 1030 -5175 33 73 0 0 chr2 216671426 216671494 -36585089 + AT_rich Low_complexity Low_complexity 1 68 0 183 186 0 0 chr2 216671867 216671910 -36584673 + C-rich Low_complexity Low_complexity 2 44 0 32 57 0 0 chr2 216672178 216672231 -36584352 + GC_rich Low_complexity Low_complexity 1 53 0 336 225 0 0 chr2 216672260 216672389 -36584194 + G-rich Low_complexity Low_complexity 1 129 0 958 85 6 28 chr2 216672967 216673144 -36583439 + (GGAGAA)n Simple_repeat Simple_repeat 5 177 0 2480 109 3 0 chr2 216673244 216673620 -36582963 - THE1C-int LTR MaLR -1203 377 1 1955 148 62 14 chr2 216673620 216673978 -36582605 - THE1C LTR MaLR 0 375 1 803 97 0 0 chr2 216673978 216674091 -36582492 - L1PA15-16 LINE L1 -6734 115 3 289 86 35 0 chr2 216674106 216674164 -36582419 + (TA)n Simple_repeat Simple_repeat 1 60 0 301 286 8 34 chr2 216674175 216674294 -36582289 - L1MC4 LINE L1 -1323 6719 6604 419 322 22 33 chr2 216674614 216674794 -36581789 - MER5B DNA MER1_type 0 178 1 847 112 16 96 chr2 216676164 216676414 -36580169 - AluSq SINE Alu -14 299 70 714 314 83 17 chr2 216679359 216679818 -36576765 - L2 LINE L2 -1983 1331 774 423 236 91 9 chr2 216681021 216681131 -36575452 + MIR SINE MIR 70 188 -74 365 291 46 76 chr2 216681149 216681367 -36575216 + L1ME LINE L1 5485 5710 -411 24 0 0 0 chr2 216682298 216682322 -36574261 + AT_rich Low_complexity Low_complexity 1 24 0 563 316 54 5 chr2 216682471 216682672 -36573911 - MIR SINE MIR 0 262 54 252 185 0 0 chr2 216683098 216683152 -36573431 + GA-rich Low_complexity Low_complexity 1 54 0 21 36 0 0 chr2 216684344 216684372 -36572211 + AT_rich Low_complexity Low_complexity 1 28 0 237 327 77 19 chr2 216685570 216685674 -36570909 - L2 LINE L2 -4 3268 3159 22 0 0 0 chr2 216686114 216686136 -36570447 + AT_rich Low_complexity Low_complexity 1 22 0 1371 167 58 0 chr2 216686893 216687151 -36569432 + AluSx SINE Alu 1 273 -39 2155 116 7 0 chr2 216687152 216687445 -36569138 - AluSq SINE Alu -18 295 1 243 256 47 0 chr2 216687517 216687603 -36568980 - L1ME LINE L1 -224 5897 5808 367 239 99 21 chr2 216687612 216687754 -36568829 - L2 LINE L2 -1 3312 3160 2415 87 3 10 chr2 216687754 216688066 -36568517 + AluSp SINE Alu 1 310 -3 1123 102 6 42 chr2 216688067 216688233 -36568350 + AluSp SINE Alu 130 289 -24 725 184 5 70 chr2 216688342 216688527 -36568056 + MLT1B LTR MaLR 1 173 -217 2281 91 13 0 chr2 216688531 216688838 -36567745 + AluY SINE Alu 1 311 0 237 229 29 86 chr2 216688938 216689008 -36567575 + MIR SINE MIR 79 144 -118 2139 116 0 0 chr2 216689050 216689342 -36567241 + AluSx SINE Alu 5 296 -16 282 324 43 58 chr2 216689715 216689854 -36566729 - L2 LINE L2 0 3272 3136 685 269 131 18 chr2 216689868 216689968 -36566615 - MLT1J LTR MaLR -196 315 228 2134 114 13 22 chr2 216689968 216690107 -36566476 + AluSx SINE Alu 1 140 -172 2042 118 0 33 chr2 216690107 216690413 -36566170 + AluSg SINE Alu 1 296 -14 2134 114 13 22 chr2 216690413 216690588 -36565995 + AluSx SINE Alu 140 312 0 685 269 131 18 chr2 216690588 216690770 -36565813 - MLT1J LTR MaLR -283 228 1 2359 94 0 0 chr2 216690821 216691120 -36565463 + AluSg SINE Alu 1 299 -11 192 97 0 0 chr2 216691131 216691162 -36565421 + (TCTCTG)n Simple_repeat Simple_repeat 1 31 0 234 296 49 0 chr2 216692900 216692981 -36563602 + L3 LINE CR1 283 367 -1210 22 0 0 0 chr2 216693619 216693641 -36562942 + AT_rich Low_complexity Low_complexity 1 22 0 546 264 63 13 chr2 216693905 216694064 -36562519 - MIR SINE MIR -76 186 20 431 299 84 43 chr2 216696071 216696400 -36560183 - L2 LINE L2 -192 3080 2737 2983 143 20 2 chr2 216696400 216696888 -36559695 + LOR1a LTR ERV1 1 497 0 2444 76 0 13 chr2 216696907 216697222 -36559361 + AluY SINE Alu 1 311 0 2316 208 49 95 chr2 216697232 216698019 -36558564 - L1ME1 LINE L1 -10 6156 5334 222 118 0 0 chr2 216698019 216698053 -36558530 + (TATATG)n Simple_repeat Simple_repeat 3 36 0 * 486 88 0 0 chr2 216698052 216698120 -36558463 + (CA)n Simple_repeat Simple_repeat 2 69 0 2316 208 49 95 chr2 216698053 216698341 -36558242 - L1ME1 LINE L1 -832 5334 5167 499 261 27 43 chr2 216698443 216698476 -36558107 + LTR16A LTR ERVL 260 292 -158 2218 116 3 0 chr2 216698476 216698770 -36557813 - AluSp SINE Alu -18 295 1 499 261 27 43 chr2 216698770 216698924 -36557659 + LTR16A LTR ERVL 292 444 -6 207 0 0 0 chr2 216698943 216698966 -36557617 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 26 30 0 0 chr2 216700816 216700849 -36555734 + AT_rich Low_complexity Low_complexity 1 33 0 5443 143 41 25 chr2 216701833 216702815 -36553768 + Tigger2 DNA MER2_type 1721 2717 -1 1260 228 41 79 chr2 216703531 216704012 -36552571 + MLT1J LTR MaLR 5 501 -10 1305 159 64 0 chr2 216705536 216705756 -36550827 - MER46A DNA MER2_type -2 234 1 314 293 52 35 chr2 216705812 216705928 -36550655 + MER5A DNA MER1_type 6 123 -66 199 301 136 0 chr2 216705843 216705946 -36550637 - MER5A DNA MER1_type -22 167 51 * 2358 103 0 0 chr2 216706124 216706426 -36550157 - AluSc SINE Alu -7 302 1 593 171 35 141 chr2 216707796 216707861 -36548722 + MER5B DNA MER1_type 1 71 -107 2009 145 10 3 chr2 216707861 216708171 -36548412 + AluSx SINE Alu 1 312 0 593 171 35 141 chr2 216708171 216708304 -36548279 + MER5B DNA MER1_type 71 178 0 321 240 125 0 chr2 216708328 216708424 -36548159 + MIR3 SINE MIR 68 175 -33 198 0 0 0 chr2 216709745 216709767 -36546816 + (T)n Simple_repeat Simple_repeat 1 22 0 393 278 86 0 chr2 216709878 216710001 -36546582 - MIR SINE MIR -62 146 39 2496 46 0 20 chr2 216710248 216710553 -36546030 - AluY SINE Alu -12 299 1 1977 122 11 11 chr2 216711452 216711739 -36544844 - AluSg SINE Alu -13 297 11 7127 176 19 20 chr2 216713547 216714043 -36542540 + L1P4 LINE L1 3823 4318 -1847 180 0 0 0 chr2 216714043 216714063 -36542520 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 7127 176 19 20 chr2 216714063 216715489 -36541094 + L1P4 LINE L1 4318 5741 -424 697 83 0 0 chr2 216715592 216715676 -36540907 - AluS SINE Alu -228 85 2 2244 92 7 30 chr2 216715754 216716058 -36540525 - AluSx SINE Alu -15 297 1 25 0 0 0 chr2 216716550 216716575 -36540008 + AT_rich Low_complexity Low_complexity 1 25 0 2209 96 10 0 chr2 216717089 216717381 -36539202 - AluY SINE Alu -3 308 14 561 227 0 0 chr2 216717824 216717934 -36538649 - AluY SINE Alu 0 311 202 665 153 32 8 chr2 216718180 216718304 -36538279 + AluSc SINE Alu 162 288 -21 26 0 0 0 chr2 216719349 216719375 -36537208 + GC_rich Low_complexity Low_complexity 1 26 0 489 86 0 49 chr2 216720566 216720647 -36535936 - L1MB8 LINE L1 0 6178 6102 244 331 131 8 chr2 216721045 216721175 -36535408 + L2 LINE L2 3127 3272 0 482 234 39 2 chr2 216721314 216721450 -36535133 - MLT1G LTR MaLR -34 496 357 247 237 85 0 chr2 216721578 216721652 -36534931 - MLT1G LTR MaLR -244 311 223 1083 165 0 0 chr2 216722133 216722303 -36534280 - AluSg/x SINE Alu -8 304 135 2204 86 20 20 chr2 216722304 216722605 -36533978 - AluSc SINE Alu -8 301 1 2031 111 14 10 chr2 216722641 216722929 -36533654 - AluSx SINE Alu -17 295 7 2235 121 0 0 chr2 216724227 216724525 -36532058 + AluSq SINE Alu 1 298 -15 6779 136 19 33 chr2 216725434 216726639 -36529944 - L1P3 LINE L1 -5269 1192 5 3354 171 41 3 chr2 216726778 216727391 -36529192 - L1MB1 LINE L1 -48 6120 5485 341 290 61 23 chr2 216731106 216731237 -36525346 + MER5A DNA MER1_type 1 136 -53 2418 114 8 8 chr2 216731827 216732186 -36524397 - MER11C LTR ERVK -14 1057 699 454 138 69 0 chr2 216732316 216732403 -36524180 - Charlie1a DNA MER1_type -47 1408 1316 563 155 10 10 chr2 216732427 216732524 -36524059 - MER20 DNA MER1_type -4 215 119 3707 192 108 78 chr2 216732564 216732718 -36523865 - Charlie1a DNA MER1_type -1487 1274 1126 356 123 0 41 chr2 216732718 216732791 -36523792 - L1PA16 LINE L1 0 6166 6097 3707 192 108 78 chr2 216732791 216732914 -36523669 - Charlie1a DNA MER1_type -1635 1126 1008 2261 105 3 10 chr2 216732914 216733227 -36523356 - AluSx SINE Alu -1 311 1 3707 192 108 78 chr2 216733227 216733418 -36523165 - Charlie1a DNA MER1_type -1753 1008 824 2074 141 13 3 chr2 216733418 216733722 -36522861 - AluSx SINE Alu -5 307 1 3707 192 108 78 chr2 216733722 216733921 -36522662 - Charlie1a DNA MER1_type -1937 824 633 2073 122 10 16 chr2 216733921 216734232 -36522351 - AluSx SINE Alu -3 309 1 3707 192 108 78 chr2 216734232 216734797 -36521786 - Charlie1a DNA MER1_type -2128 633 1 2065 135 3 3 chr2 216735811 216736122 -36520461 + AluY SINE Alu 1 311 0 770 166 0 58 chr2 216736308 216736447 -36520136 - FLAM_C SINE Alu -2 131 1 538 90 0 51 chr2 216736517 216736595 -36519988 + AluJ/FRAM SINE Alu 222 295 -17 182 204 56 37 chr2 216736878 216736932 -36519651 - L2 LINE L2 -83 3230 3176 2348 65 14 7 chr2 216736959 216737251 -36519332 + AluSq SINE Alu 1 294 -19 351 268 161 30 chr2 216737274 216737442 -36519141 - L2 LINE L2 -2127 1187 998 829 164 22 0 chr2 216737750 216737884 -36518699 + MSTB LTR MaLR 290 426 0 2376 178 61 6 chr2 216737884 216738389 -36518194 + L1M4 LINE L1 4867 5399 -747 2495 11 7 3 chr2 216738431 216738716 -36517867 - AluY SINE Alu -25 286 1 447 271 105 33 chr2 216739049 216739386 -36517197 + LTR16A LTR ERVL 58 450 0 1899 83 26 8 chr2 216739682 216739946 -36516637 + AluY SINE Alu 2 270 -41 2263 129 0 0 chr2 216740464 216740774 -36515809 - AluSq SINE Alu -2 311 2 1710 162 3 17 chr2 216743311 216743601 -36512982 + AluJb SINE Alu 9 294 -18 340 206 98 22 chr2 216743698 216743779 -36512804 - MIR SINE MIR 0 262 172 2222 86 13 20 chr2 216743779 216744080 -36512503 - AluSg SINE Alu -11 299 1 2171 121 3 3 chr2 216744576 216744882 -36511701 - AluSq SINE Alu -2 311 6 1939 163 0 0 chr2 216744899 216745199 -36511384 - AluSx SINE Alu -12 300 1 2061 228 46 26 chr2 216745279 216745894 -36510689 + L1M3b LINE L1 1238 1844 -4516 188 367 148 5 chr2 216746711 216746907 -36509676 - L2 LINE L2 -829 2485 2262 1126 261 16 19 chr2 216747093 216747403 -36509180 - MLT1J LTR MaLR -190 321 13 1003 212 0 27 chr2 216748168 216748466 -36508117 - MLT1D LTR MaLR -172 333 6 2222 123 0 10 chr2 216748482 216748792 -36507791 - AluSx SINE Alu -5 307 1 235 309 12 0 chr2 216749401 216749482 -36507101 - L1ME LINE L1 -297 5824 5743 2478 50 10 0 chr2 216749644 216749941 -36506642 + AluY SINE Alu 1 300 -11 469 304 122 36 chr2 216750185 216750596 -36505987 - L2 LINE L2 -12 3301 2856 2013 123 0 3 chr2 216750724 216751008 -36505575 - AluY SINE Alu -28 283 1 1706 153 29 11 chr2 216751040 216751321 -36505262 + AluJb SINE Alu 10 295 -17 448 260 163 25 chr2 216751336 216751613 -36504970 + L1MC/D LINE L1 5317 5631 -2177 2230 98 10 0 chr2 216751869 216752164 -36504419 - AluSp SINE Alu -15 298 1 338 256 128 24 chr2 216752294 216752458 -36504125 - L1MC4a LINE L1 -1883 5925 5745 314 281 58 43 chr2 216752491 216752630 -36503953 + L1ME LINE L1 6 146 -5924 186 43 0 0 chr2 216753980 216754003 -36502580 + (TATG)n Simple_repeat Simple_repeat 4 26 0 2315 62 0 14 chr2 216755982 216756271 -36500312 - AluSg SINE Alu -23 287 3 864 152 0 36 chr2 216757479 216757617 -36498966 - FLAM_A SINE Alu 0 133 1 1467 88 5 16 chr2 216758530 216758724 -36497859 - AluSg/x SINE Alu -19 291 100 243 191 0 0 chr2 216758727 216758790 -36497793 + T-rich Low_complexity Low_complexity 1 63 0 2196 68 7 4 chr2 216758835 216759113 -36497470 + AluY SINE Alu 30 308 -3 2106 137 0 0 chr2 216759159 216759458 -36497125 - AluSx SINE Alu -13 299 1 278 347 40 7 chr2 216759693 216759843 -36496740 + MIR SINE MIR 8 162 -100 838 220 25 34 chr2 216760023 216760259 -36496324 + MER96B DNA MER1_type? 4 237 -180 793 231 25 10 chr2 216760802 216761001 -36495582 - L1PA13 LINE L1 -3417 3380 3179 * 3587 184 4 18 chr2 216760996 216761813 -36494770 - L1PA13 LINE L1 -4352 2445 1626 604 146 18 0 chr2 216761821 216761925 -36494658 + L1P5 LINE L1 5433 5546 -608 266 105 0 0 chr2 216761899 216761937 -36494646 - L1M1 LINE L1 -832 5473 5436 * 1537 261 6 6 chr2 216761935 216762291 -36494292 - L1PA13 LINE L1 -5163 1624 1269 315 279 111 82 chr2 216762345 216762553 -36494030 - L1PA13 LINE L1 -5988 799 586 1309 274 0 3 chr2 216762570 216762862 -36493721 - L1PA13 LINE L1 -6496 291 1 1787 134 24 10 chr2 216762869 216763160 -36493423 - L1M1 LINE L1 -524 5781 5487 271 130 22 0 chr2 216763310 216763356 -36493227 + L1MB4 LINE L1 5874 5920 -260 2155 92 41 7 chr2 216764338 216764630 -36491953 + AluSq SINE Alu 7 308 -5 22 0 0 0 chr2 216766529 216766551 -36490032 + AT_rich Low_complexity Low_complexity 1 22 0 186 250 19 0 chr2 216766646 216766698 -36489885 + MIR SINE MIR 92 144 -118 224 282 214 23 chr2 216767225 216767356 -36489227 - L2 LINE L2 0 3313 3158 489 318 162 30 chr2 216767494 216767860 -36488723 - L2 LINE L2 -245 3068 2662 446 280 32 17 chr2 216767889 216768158 -36488425 + LTR16A1 LTR ERVL 1 315 -142 205 304 122 81 chr2 216768175 216768471 -36488112 - L2 LINE L2 -1445 1869 1562 199 216 0 0 chr2 216768748 216768785 -36487798 - MIR3 SINE MIR -21 187 151 276 294 47 0 chr2 216768922 216769007 -36487576 + L2 LINE L2 3002 3090 -182 189 0 0 0 chr2 216770198 216770219 -36486364 + (T)n Simple_repeat Simple_repeat 1 21 0 197 318 47 24 chr2 216771105 216771190 -36485393 + MIR SINE MIR 47 133 -75 587 166 131 5 chr2 216773556 216773755 -36482828 + AluSp SINE Alu 75 298 -15 1920 102 23 30 chr2 216773769 216774072 -36482511 + AluSp SINE Alu 1 301 -12 2265 107 3 0 chr2 216774190 216774490 -36482093 + AluSx SINE Alu 1 301 -11 565 308 14 61 chr2 216775315 216775594 -36480989 - MER102a DNA MER1_type -19 311 46 1612 59 118 0 chr2 216775768 216775972 -36480611 + AluY SINE Alu 1 228 -83 1065 137 80 0 chr2 216776055 216776181 -36480402 + AluJo SINE Alu 1 146 -166 255 61 0 0 chr2 216776181 216776214 -36480369 + (CA)n Simple_repeat Simple_repeat 2 34 0 1065 137 80 0 chr2 216776214 216776262 -36480321 + AluJo SINE Alu 146 189 -123 2474 82 3 0 chr2 216776822 216777125 -36479458 - AluSg SINE Alu -6 304 1 1619 122 32 0 chr2 216777126 216777372 -36479211 - L1MB3 LINE L1 -153 6030 5777 1420 70 5 0 chr2 216777372 216777557 -36479026 - AluY SINE Alu -7 304 119 248 242 32 0 chr2 216778622 216778684 -36477899 + L2 LINE L2 3207 3270 -2 276 273 45 68 chr2 216778697 216778829 -36477754 + MIR SINE MIR 73 201 -61 2212 99 3 10 chr2 216779098 216779416 -36477167 + AluSp SINE Alu 1 313 0 868 156 19 7 chr2 216780311 216780465 -36476118 - AluJb SINE Alu -20 292 137 2163 80 4 7 chr2 216780475 216780750 -36475833 - AluSc SINE Alu -20 289 16 254 167 0 0 chr2 216780750 216780786 -36475797 - AluSc SINE Alu -272 36 1 1996 154 74 26 chr2 216781068 216781600 -36474983 - MLT2A2 LTR ERVL 0 554 1 385 233 69 31 chr2 216782390 216782549 -36474034 + L2 LINE L2 2740 2904 -410 1158 138 20 106 chr2 216782632 216782878 -36473705 - MLT1B LTR MaLR -2 388 164 2321 114 3 0 chr2 216782882 216783190 -36473393 - AluSp SINE Alu -4 309 1 219 103 0 0 chr2 216783299 216783338 -36473245 + (TA)n Simple_repeat Simple_repeat 1 39 0 2851 136 39 14 chr2 216783522 216784009 -36472574 + L1MA3 LINE L1 5807 6305 0 982 236 47 0 chr2 216784011 216784265 -36472318 + L1 LINE L1 4976 5241 -905 13677 140 41 20 chr2 216784265 216786614 -36469969 + Tigger1 DNA MER2_type 1 2398 -20 25503 79 6 17 chr2 216786997 216791289 -36465294 - L1PA4 LINE L1 -1 6154 1909 4611 137 28 22 chr2 216791462 216792237 -36464346 - L1MB2 LINE L1 -2 6169 5390 2398 89 0 3 chr2 216792237 216792541 -36464042 - AluSg SINE Alu -7 303 1 342 201 240 50 chr2 216792628 216792807 -36463776 - Charlie2 DNA MER1_type -182 2680 2468 2304 83 10 0 chr2 216792841 216793130 -36463453 - AluY SINE Alu -19 292 1 941 137 0 0 chr2 216793140 216793264 -36463319 - FLAM_C SINE Alu -9 124 1 256 304 27 45 chr2 216793672 216793784 -36462799 - MIR SINE MIR -129 133 24 2120 100 20 3 chr2 216794184 216794485 -36462098 + AluSq SINE Alu 2 307 -6 999 115 107 4 chr2 216794517 216794760 -36461823 + AluSx SINE Alu 9 276 -36 247 286 99 0 chr2 216795702 216795793 -36460790 + L2 LINE L2 3173 3272 0 356 263 119 0 chr2 216796042 216796160 -36460423 + MER94 DNA DNA 1 132 -2 471 326 29 17 chr2 216797038 216797213 -36459370 - MIR SINE MIR -35 227 51 187 278 69 14 chr2 216797273 216797345 -36459238 + MIR3 SINE MIR 130 205 -3 1260 116 37 5 chr2 216798725 216798914 -36457669 + AluSg/x SINE Alu 99 293 -17 1355 199 39 33 chr2 216798915 216799252 -36457331 + L1MD3 LINE L1 7657 7995 0 375 152 15 15 chr2 216799412 216799478 -36457105 + MER69 DNA AcHobo 1 66 -2460 373 213 32 90 chr2 216799633 216799788 -36456795 + MER69 DNA AcHobo 2380 2525 -1 307 327 31 43 chr2 216799987 216800149 -36456434 - MIR3 SINE MIR -11 197 38 232 333 0 0 chr2 216802035 216802098 -36454485 - L2 LINE L2 -29 3243 3181 424 294 194 17 chr2 216804406 216804705 -36451878 - MLT1J LTR MaLR -144 367 16 183 162 0 0 chr2 216804946 216804983 -36451600 + (CA)n Simple_repeat Simple_repeat 2 38 0 1779 126 39 3 chr2 216806601 216806887 -36449696 - AluSx SINE Alu -12 300 5 330 26 0 0 chr2 216806952 216806991 -36449592 + (GA)n Simple_repeat Simple_repeat 1 39 0 238 293 232 24 chr2 216807170 216807416 -36449167 - L3b LINE CR1 -118 1465 1169 348 306 88 37 chr2 216807599 216807815 -36448768 - MIR SINE MIR -21 241 15 246 231 46 15 chr2 216808273 216808338 -36448245 - MIR SINE MIR -88 174 108 2204 116 3 0 chr2 216808434 216808727 -36447856 - AluSq SINE Alu -19 294 1 286 275 0 0 chr2 216808773 216808842 -36447741 - MIR3 SINE MIR -3 205 137 982 97 0 0 chr2 216808857 216809004 -36447579 - AluSg/x SINE Alu 0 305 159 * 1151 99 22 249 chr2 216809003 216809368 -36447215 - AluSq SINE Alu -31 282 1 2192 115 0 0 chr2 216809724 216810020 -36446563 + AluSx SINE Alu 1 296 -16 189 0 0 0 chr2 216810204 216810225 -36446358 + (GAAA)n Simple_repeat Simple_repeat 2 22 0 2162 91 7 14 chr2 216810987 216811302 -36445281 - AluSq SINE Alu 0 315 3 1572 156 35 35 chr2 216811368 216811657 -36444926 - AluJo SINE Alu -23 289 1 187 270 63 0 chr2 216812162 216812225 -36444358 - MIR SINE MIR -88 174 108 2161 121 13 0 chr2 216812986 216813284 -36443299 + AluSx SINE Alu 1 302 -10 1819 145 34 24 chr2 216813730 216814027 -36442556 + AluSg SINE Alu 1 300 -10 421 197 174 76 chr2 216815121 216815253 -36441330 - MER5A DNA MER1_type -32 157 13 190 337 128 0 chr2 216815592 216815678 -36440905 - MIR SINE MIR -64 144 48 2290 85 3 0 chr2 216815696 216816029 -36440554 - AluSx SINE Alu 0 334 1 483 278 80 17 chr2 216816223 216816399 -36440184 + MIR SINE MIR 73 259 -3 207 282 42 0 chr2 216816547 216816618 -36439965 + (TATATG)n Simple_repeat Simple_repeat 3 76 0 578 293 188 17 chr2 216816971 216817322 -36439261 - MLT1K LTR MaLR -73 515 105 485 287 67 43 chr2 216817355 216817564 -36439019 - MIR SINE MIR -34 228 15 311 214 0 0 chr2 216817579 216817635 -36438948 - MLT1K LTR MaLR -528 60 5 2293 63 7 30 chr2 216817919 216818222 -36438361 - AluSq SINE Alu -17 296 1 269 224 141 0 chr2 216818637 216818722 -36437861 + L1ME LINE L1 5701 5797 -324 3705 159 124 31 chr2 216818911 216819816 -36436767 + L1MB5 LINE L1 5178 6174 0 255 261 81 36 chr2 216819978 216820089 -36436494 - L2 LINE L2 -858 2456 2341 408 214 143 9 chr2 216820271 216820383 -36436200 - MER94 DNA DNA -1 133 7 230 304 0 14 chr2 216820611 216820680 -36435903 - L3 LINE CR1 -1 1576 1509 23 0 0 0 chr2 216821649 216821672 -36434911 + AT_rich Low_complexity Low_complexity 1 23 0 43 20 0 0 chr2 216822147 216822197 -36434386 + AT_rich Low_complexity Low_complexity 1 50 0 324 188 47 24 chr2 216823834 216824004 -36432579 + (TTGTG)n Simple_repeat Simple_repeat 5 178 0 * 350 207 11 45 chr2 216823881 216824060 -36432523 + T-rich Low_complexity Low_complexity 5 177 0 618 242 62 36 chr2 216825160 216825354 -36431229 + MIR SINE MIR 63 261 -1 21 36 0 0 chr2 216825916 216825944 -36430639 + AT_rich Low_complexity Low_complexity 1 28 0 465 233 62 7 chr2 216827043 216827189 -36429394 + L1M4c LINE L1 1923 2076 -4308 1152 197 74 44 chr2 216827226 216827690 -36428893 - L1MC4a LINE L1 -1503 6305 5722 557 263 105 81 chr2 216827698 216828019 -36428564 - L1ME LINE L1 -395 5775 5446 2244 77 20 10 chr2 216828292 216828592 -36427991 + AluSx SINE Alu 1 303 -9 264 122 0 0 chr2 216829535 216829576 -36427007 + (T)n Simple_repeat Simple_repeat 1 41 0 607 136 0 34 chr2 216829770 216829858 -36426725 + AluJ/FLAM SINE Alu 2 86 -226 27 0 0 0 chr2 216829865 216829892 -36426691 + AT_rich Low_complexity Low_complexity 1 27 0 2083 117 10 0 chr2 216830488 216830786 -36425797 + AluSg SINE Alu 1 301 -9 973 290 108 22 chr2 216830789 216831005 -36425578 + HAL1 LINE L1 1383 1579 -928 1965 176 0 0 chr2 216831005 216831317 -36425266 + AluJb SINE Alu 1 312 0 2441 87 6 0 chr2 216831318 216831629 -36424954 + AluSq SINE Alu 1 313 0 973 290 108 22 chr2 216831629 216831948 -36424635 + HAL1 LINE L1 1578 1966 -541 530 281 105 4 chr2 216832159 216832387 -36424196 + HAL1 LINE L1 2050 2300 -207 1613 278 50 57 chr2 216832632 216833014 -36423569 + L1ME2 LINE L1 996 1379 -5017 2714 162 24 80 chr2 216833014 216833563 -36423020 + MLT2B1 LTR ERVL 3 520 0 1613 278 50 57 chr2 216833563 216834255 -36422328 + L1ME2 LINE L1 1379 2063 -4333 690 277 19 0 chr2 216834257 216834412 -36422171 + MER5A DNA MER1_type 2 159 -30 2294 233 82 35 chr2 216834507 216836130 -36420453 + L1ME2 LINE L1 3680 5492 -739 491 216 35 0 chr2 216836121 216836237 -36420346 + L1ME2 LINE L1 6074 6193 -40 * 43119 36 23 3 chr2 216836248 216842272 -36414311 + L1PA3 LINE L1 7 6154 -1 323 280 38 109 chr2 216842469 216842891 -36413692 - L2 LINE L2 -641 2673 2282 345 65 0 0 chr2 216842915 216842961 -36413622 - MADE1 DNA Mariner 0 80 35 508 295 124 18 chr2 216843157 216843374 -36413209 + MIR SINE MIR 12 251 -11 432 0 0 0 chr2 216844387 216844435 -36412148 + (TG)n Simple_repeat Simple_repeat 2 49 0 396 302 79 60 chr2 216845275 216845506 -36411077 - MIR SINE MIR -2 260 27 21 0 0 0 chr2 216846519 216846540 -36410043 + AT_rich Low_complexity Low_complexity 1 21 0 2483 86 0 0 chr2 216846683 216846984 -36409599 - AluSx SINE Alu -11 301 1 2008 146 0 0 chr2 216847153 216847433 -36409150 + AluSx SINE Alu 1 280 -32 188 86 29 0 chr2 216847436 216847471 -36409112 + (TAAAA)n Simple_repeat Simple_repeat 2 37 0 4138 146 11 62 chr2 216847670 216848398 -36408185 - LTR8 LTR ERV1 0 691 1 2409 90 0 3 chr2 216848508 216848820 -36407763 - AluSp SINE Alu -2 311 1 2058 108 14 20 chr2 216849354 216849651 -36406932 - AluSx SINE Alu -17 295 1 217 217 22 0 chr2 216850043 216850089 -36406494 - L2 LINE L2 -12 3301 3255 329 297 0 0 chr2 216850150 216850224 -36406359 - L2 LINE L2 -5 3267 3194 198 319 14 14 chr2 216850233 216850302 -36406281 - MIR SINE MIR -183 79 11 247 251 54 92 chr2 216851013 216851308 -36405275 + L1MEd LINE L1 931 1214 -4905 * 1522 279 28 11 chr2 216851301 216851759 -36404824 + HAL1 LINE L1 1658 2123 -384 1691 171 71 66 chr2 216851816 216852196 -36404387 - MLT1B LTR MaLR -8 382 1 248 245 0 0 chr2 216852196 216852249 -36404334 + L1M4 LINE L1 3622 3674 -2472 1029 198 30 67 chr2 216852287 216852555 -36404028 + L1MA5 LINE L1 1 258 -6951 2916 76 98 5 chr2 216852555 216852965 -36403618 + LTR7 LTR ERV1 1 448 -2 18754 91 5 18 chr2 216852967 216856996 -36399587 + HERVH LTR ERV1 1 3993 -3720 2963 146 0 2 chr2 216856998 216857616 -36398967 + HERVH LTR ERV1 4488 5149 -2564 1448 125 19 0 chr2 216857617 216857833 -36398750 + HERVH LTR ERV1 5600 5819 -1894 2437 93 48 13 chr2 216857833 216858210 -36398373 + HERVH LTR ERV1 7324 7713 0 2948 75 95 7 chr2 216858210 216858622 -36397961 + LTR7 LTR ERV1 1 448 -2 1323 243 118 95 chr2 216858625 216859362 -36397221 + L1MA5 LINE L1 255 1008 -6201 * 13880 171 32 47 chr2 216859344 216861280 -36395303 + L1MA5 LINE L1 1722 3686 -3676 2784 13 0 22 chr2 216861280 216861598 -36394985 + AluY SINE Alu 1 311 0 13880 171 32 47 chr2 216861598 216863099 -36393484 + L1MA5 LINE L1 3686 5209 -2153 1944 163 0 22 chr2 216863099 216863400 -36393183 + AluJb SINE Alu 1 296 -16 243 0 0 0 chr2 216863400 216863427 -36393156 + (CA)n Simple_repeat Simple_repeat 2 28 0 1944 163 0 22 chr2 216863427 216863444 -36393139 + AluJb SINE Alu 296 312 0 13880 171 32 47 chr2 216863444 216863910 -36392673 + L1MA5 LINE L1 5209 5681 -1681 2178 109 31 0 chr2 216863910 216864204 -36392379 + AluSp SINE Alu 1 303 -10 13880 171 32 47 chr2 216864204 216864513 -36392070 + L1MA5 LINE L1 5681 5993 -1369 2832 13 0 0 chr2 216864513 216864819 -36391764 - AluYb8 SINE Alu -12 306 1 13880 171 32 47 chr2 216864819 216865367 -36391216 + L1MA5 LINE L1 5993 6548 -814 2193 117 0 0 chr2 216865367 216865658 -36390925 + AluSc SINE Alu 1 291 -18 13880 171 32 47 chr2 216865658 216866601 -36389982 + L1MA5 LINE L1 6548 7362 0 425 303 155 35 chr2 216867018 216867537 -36389046 + L1ME4a LINE L1 5264 5872 -249 342 121 35 0 chr2 216867537 216867595 -36388988 + L1MA7 LINE L1 6231 6290 -1 425 303 155 35 chr2 216867595 216867695 -36388888 + L1ME4a LINE L1 5872 5959 -162 254 202 84 92 chr2 216867814 216867933 -36388650 - MLT1F LTR MaLR 0 542 425 219 114 0 0 chr2 216868263 216868298 -36388285 + (TAGG)n Simple_repeat Simple_repeat 1 35 0 543 282 93 55 chr2 216868966 216869500 -36387083 + L1ME LINE L1 5213 5770 -392 1563 165 59 36 chr2 216870680 216870983 -36385600 + AluJo SINE Alu 1 310 -2 214 248 195 71 chr2 216872128 216872170 -36384413 + MIR SINE MIR 20 55 -207 8238 51 9 1 chr2 216872170 216873128 -36383455 + LTR5 LTR ERVK 1 966 -3 214 248 195 71 chr2 216873128 216873198 -36383385 + MIR SINE MIR 55 146 -116 1522 211 75 71 chr2 216873228 216873693 -36382890 + MLT1C LTR MaLR 1 467 0 733 201 82 26 chr2 216874180 216874374 -36382209 + MIR SINE MIR 4 208 -54 530 297 83 22 chr2 216875309 216875538 -36381045 - MIR SINE MIR -6 256 14 206 344 11 21 chr2 216876396 216876489 -36380094 + MIR SINE MIR 45 136 -72 212 122 24 0 chr2 216879279 216879320 -36377263 + GA-rich Low_complexity Low_complexity 2 43 0 249 256 51 26 chr2 216879398 216879476 -36377107 + L2 LINE L2 2924 3003 -310 189 74 0 0 chr2 216879595 216879622 -36376961 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 299 144 22 22 chr2 216881514 216881604 -36374979 + GA-rich Low_complexity Low_complexity 5 94 0 1305 71 0 0 chr2 216881604 216881814 -36374769 + (GAA)n Simple_repeat Simple_repeat 1 210 0 1425 252 92 7 chr2 216882094 216882507 -36374076 + LTR33A LTR ERVL 66 513 -10 22 0 0 0 chr2 216882599 216882621 -36373962 + AT_rich Low_complexity Low_complexity 1 22 0 608 244 13 19 chr2 216882693 216882849 -36373734 - MIR SINE MIR -44 218 64 2506 33 36 23 chr2 216883126 216883433 -36373150 - AluY SINE Alu 0 311 1 2218 106 10 7 chr2 216886528 216886830 -36369753 - AluSx SINE Alu -9 303 1 435 262 37 61 chr2 216886843 216887057 -36369526 - L2 LINE L2 -32 3281 3073 901 122 149 0 chr2 216887162 216887310 -36369273 - FRAM SINE Alu -14 162 1 194 383 53 0 chr2 216887357 216887451 -36369132 + L2 LINE L2 3172 3270 -2 240 365 43 39 chr2 216887458 216887666 -36368917 - L2 LINE L2 -666 2648 2440 964 270 85 7 chr2 216887691 216887998 -36368585 + MLT1J1 LTR MaLR 7 337 -109 189 256 0 0 chr2 216889352 216889395 -36367188 + L2 LINE L2 3214 3256 -16 325 349 52 23 chr2 216889998 216890170 -36366413 - MER5B DNA MER1_type -1 177 1 242 327 59 30 chr2 216891035 216891136 -36365447 + L2 LINE L2 3122 3225 -47 435 132 73 0 chr2 216891683 216891751 -36364832 - L1PA13 LINE L1 -4 6159 6087 2014 56 0 0 chr2 216891752 216892003 -36364580 + L1PA13 LINE L1 5831 6081 -82 517 155 41 0 chr2 216892024 216892121 -36364462 - L1MA8 LINE L1 -5 6286 6186 548 253 123 11 chr2 216892124 216892323 -36364260 + L1MC4a LINE L1 5618 5806 -315 518 213 95 30 chr2 216892323 216892492 -36364091 + MER104 DNA MER2_type 1 180 0 548 253 123 11 chr2 216892492 216892508 -36364075 + L1MC4a LINE L1 5806 5819 -302 233 270 144 0 chr2 216892594 216892705 -36363878 + L1ME4a LINE L1 5974 6100 -21 22 0 0 0 chr2 216893571 216893593 -36362990 + AT_rich Low_complexity Low_complexity 1 22 0 1000 210 19 5 chr2 216894526 216894731 -36361852 - MER3 DNA MER1_type -1 208 1 1159 130 12 0 chr2 216894774 216894943 -36361640 + AluSg/x SINE Alu 133 303 -7 345 282 36 44 chr2 216895107 216895288 -36361295 - MIR SINE MIR -50 212 30 189 0 0 0 chr2 216895336 216895357 -36361226 + (A)n Simple_repeat Simple_repeat 1 21 0 196 338 14 0 chr2 216895358 216895432 -36361151 - MIR SINE MIR -7 255 181 234 0 0 51 chr2 216895453 216895492 -36361091 - L1PA3 LINE L1 0 6155 6119 257 292 14 0 chr2 216895493 216895565 -36361018 + L2 LINE L2 2268 2340 -974 387 308 96 24 chr2 216895581 216895789 -36360794 - L2 LINE L2 -693 2621 2399 * 498 311 120 14 chr2 216895781 216896339 -36360244 + L2 LINE L2 2684 3309 -4 475 247 111 25 chr2 216896355 216896517 -36360066 - MIR SINE MIR -86 176 1 255 200 0 0 chr2 216896546 216896591 -36359992 - L2 LINE L2 -5 3308 3264 2245 109 0 0 chr2 216897058 216897351 -36359232 + AluSg SINE Alu 5 297 -13 250 246 95 103 chr2 216897351 216897477 -36359106 + MIR SINE MIR 47 144 -64 371 330 57 77 chr2 216897664 216897964 -36358619 + L2 LINE L2 2889 3182 -90 226 308 222 8 chr2 216898912 216899029 -36357554 + MIR3 SINE MIR 5 146 -62 260 238 107 47 chr2 216899580 216899698 -36356885 - MIR SINE MIR -71 137 28 227 288 36 45 chr2 216900322 216900433 -36356150 - MIR SINE MIR 0 262 153 315 273 78 55 chr2 216900812 216900940 -36355643 + L2 LINE L2 3141 3271 -1 489 342 32 11 chr2 216901025 216901212 -36355371 - MIR3 SINE MIR -1 207 17 477 0 0 0 chr2 216903374 216903427 -36353156 + (TC)n Simple_repeat Simple_repeat 1 53 0 2211 135 0 0 chr2 216903667 216903979 -36352604 - AluSx SINE Alu 0 312 1 517 278 32 27 chr2 216904423 216904610 -36351973 - MER5A DNA MER1_type -1 188 1 25 0 0 0 chr2 216904781 216904806 -36351777 + AT_rich Low_complexity Low_complexity 1 25 0 324 0 0 0 chr2 216905199 216905235 -36351348 + (T)n Simple_repeat Simple_repeat 1 36 0 294 244 76 34 chr2 216907014 216907133 -36349450 - MER113 DNA MER1_type? -397 124 1 272 327 72 7 chr2 216907140 216907293 -36349290 + MIR3 SINE MIR 18 180 -28 222 219 55 82 chr2 216907457 216907530 -36349053 + MIR SINE MIR 66 136 -126 2354 115 50 10 chr2 216907543 216907926 -36348657 - L1MA8 LINE L1 -5 6286 5889 183 80 0 0 chr2 216910252 216910277 -36346306 + (CA)n Simple_repeat Simple_repeat 2 26 0 192 40 0 0 chr2 216910676 216910701 -36345882 + (TA)n Simple_repeat Simple_repeat 2 26 0 273 29 0 0 chr2 216914398 216914432 -36342151 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 360 103 0 0 chr2 216916364 216916422 -36340161 + (TG)n Simple_repeat Simple_repeat 2 59 0 850 267 42 0 chr2 216916751 216916968 -36339615 + MIR SINE MIR 36 261 -1 244 275 88 11 chr2 216917226 216917317 -36339266 - MIR SINE MIR -11 251 154 840 274 116 20 chr2 216917538 216917841 -36338742 + MLT1K LTR MaLR 192 523 -65 214 225 14 14 chr2 216918620 216918691 -36337892 + CT-rich Low_complexity Low_complexity 2 72 0 286 237 8 13 chr2 216918767 216918894 -36337689 - MIR SINE MIR -78 184 8 1782 203 49 72 chr2 216918944 216919456 -36337127 + MLT1D LTR MaLR 3 502 -3 2272 97 13 6 chr2 216920218 216920529 -36336054 + AluSq SINE Alu 1 313 0 743 214 87 72 chr2 216920991 216921323 -36335260 - Charlie8 DNA MER1_type -1996 421 85 202 308 0 15 chr2 216923528 216923593 -36332990 + L2 LINE L2 3204 3267 -5 683 208 127 36 chr2 216924945 216925166 -36331417 + MIR SINE MIR 7 247 -15 21 0 0 0 chr2 216926912 216926933 -36329650 + AT_rich Low_complexity Low_complexity 1 21 0 272 184 120 40 chr2 216928090 216928215 -36328368 - Charlie7 DNA MER1_type -47 2565 2431 350 290 9 19 chr2 216928327 216928434 -36328149 + L2 LINE L2 2624 2729 -585 583 183 63 0 chr2 216928452 216928578 -36328005 + Charlie4 DNA MER1_type 1821 1954 -7 844 242 246 17 chr2 216928598 216929041 -36327542 + L2 LINE L2 2743 3275 -38 23 0 0 0 chr2 216929687 216929710 -36326873 + AT_rich Low_complexity Low_complexity 1 23 0 2572 44 0 25 chr2 216930366 216930685 -36325898 - AluY SINE Alu 0 311 1 718 199 92 31 chr2 216930890 216931086 -36325497 + Charlie5 DNA MER1_type 7 214 -2398 * 1137 149 52 34 chr2 216931066 216931334 -36325249 + Charlie5 DNA MER1_type 2352 2624 0 362 196 25 29 chr2 216931681 216931782 -36324801 + MER5A DNA MER1_type 5 112 -77 397 296 132 19 chr2 216931802 216931961 -36324622 - L2 LINE L2 -253 3060 2884 452 277 9 36 chr2 216932026 216932138 -36324445 + L2 LINE L2 3140 3248 -24 1137 142 42 47 chr2 216932262 216932452 -36324131 - MER5A DNA MER1_type 0 189 1 233 254 24 54 chr2 216932462 216932564 -36324019 + MIR SINE MIR 20 118 -90 29 0 0 0 chr2 216933176 216933205 -36323378 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 216933437 216933458 -36323125 + AT_rich Low_complexity Low_complexity 1 21 0 1344 183 65 39 chr2 216933973 216934252 -36322331 - AluJo SINE Alu -21 291 6 198 0 0 0 chr2 216934889 216934911 -36321672 + (TA)n Simple_repeat Simple_repeat 2 23 0 1851 158 0 24 chr2 216935188 216935485 -36321098 + AluJb SINE Alu 4 293 -19 200 308 0 19 chr2 216936197 216936249 -36320334 - L2 LINE L2 -12 3301 3251 180 258 0 65 chr2 216936277 216936339 -36320244 + L2 LINE L2 3209 3266 -6 239 291 149 28 chr2 216936728 216936869 -36319714 - L2 LINE L2 -200 3072 2915 224 294 98 22 chr2 216937224 216937316 -36319267 + L2 LINE L2 3169 3267 -5 297 0 0 0 chr2 216937464 216937497 -36319086 + (CA)n Simple_repeat Simple_repeat 1 33 0 811 246 12 60 chr2 216938066 216938266 -36318317 + MLT1J LTR MaLR 3 190 -321 2265 102 3 0 chr2 216938266 216938561 -36318022 - AluSx SINE Alu -12 300 5 811 246 12 60 chr2 216938561 216938612 -36317971 + MLT1J LTR MaLR 190 242 -269 392 218 62 36 chr2 216938995 216939138 -36317445 + MIR SINE MIR 40 180 -63 746 296 38 25 chr2 216939844 216940084 -36316499 - MIR SINE MIR -8 254 12 285 325 189 11 chr2 216940675 216940866 -36315717 - MIR SINE MIR -30 232 8 1368 177 24 46 chr2 216941159 216941487 -36315096 + MER33 DNA MER1_type 1 321 -3 381 345 70 51 chr2 216941512 216941868 -36314715 - L2 LINE L2 -540 2774 2412 310 303 112 33 chr2 216942228 216942380 -36314203 + MIR SINE MIR 8 171 -91 267 31 0 0 chr2 216943524 216943556 -36313027 + (CAAAAA)n Simple_repeat Simple_repeat 6 37 0 368 313 60 7 chr2 216944774 216944924 -36311659 + MIR SINE MIR 63 220 -42 1302 175 5 5 chr2 216946250 216946467 -36310116 - MER20 DNA MER1_type 0 219 3 323 286 203 0 chr2 216946704 216946837 -36309746 + MER91A DNA MER1_type 37 196 0 23 0 0 0 chr2 216951691 216951714 -36304869 + AT_rich Low_complexity Low_complexity 1 23 0 189 309 18 0 chr2 216953291 216953346 -36303237 + L2 LINE L2 3216 3271 -1 969 258 36 12 chr2 216953879 216954127 -36302456 + MIR SINE MIR 3 256 -6 2201 81 34 7 chr2 216955035 216955331 -36301252 - AluSx SINE Alu -8 304 1 23 0 0 0 chr2 216955507 216955530 -36301053 + AT_rich Low_complexity Low_complexity 1 23 0 489 272 152 58 chr2 216956725 216956949 -36299634 - MIR SINE MIR -16 246 2 568 303 74 11 chr2 216957832 216958007 -36298576 - MIR3 SINE MIR -3 205 20 210 229 66 16 chr2 216961666 216961727 -36294856 + L2 LINE L2 3200 3263 -9 1237 151 14 23 chr2 216961946 216962164 -36294419 + AluJo SINE Alu 88 303 -9 2278 112 0 3 chr2 216962897 216963191 -36293392 + AluSx SINE Alu 1 293 -19 4750 218 55 18 chr2 216963192 216964453 -36292130 + L1MC4a LINE L1 6552 7802 -6 628 184 63 25 chr2 216965028 216965186 -36291397 - L1MD3 LINE L1 -874 7121 6958 189 0 0 0 chr2 216969492 216969513 -36287070 + (T)n Simple_repeat Simple_repeat 1 21 0 778 257 60 28 chr2 216970049 216970267 -36286316 + MIR SINE MIR 3 228 -34 187 208 247 13 chr2 216970430 216970507 -36286076 + MIR SINE MIR 41 135 -73 204 97 0 0 chr2 216970907 216970938 -36285645 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 687 316 115 24 chr2 216971563 216972091 -36284492 + L2 LINE L2 2724 3309 -4 2235 92 0 33 chr2 216975220 216975524 -36281059 - AluSc SINE Alu -15 294 1 237 271 103 28 chr2 216976283 216976390 -36280193 + MIR SINE MIR 20 134 -74 762 218 90 90 chr2 216976757 216977078 -36279505 - MER102a DNA MER1_type -9 321 1 403 370 36 72 chr2 216977712 216978158 -36278425 - L2 LINE L2 -4 3268 2839 236 309 0 0 chr2 216978676 216978744 -36277839 + GA-rich Low_complexity Low_complexity 2 69 0 448 245 38 0 chr2 216981080 216981186 -36275397 + L2 LINE L2 3143 3252 -20 233 245 0 0 chr2 216982047 216982100 -36274483 + A-rich Low_complexity Low_complexity 1 53 0 825 245 80 77 chr2 216983864 216984191 -36272392 + MER102b DNA MER1_type 14 341 0 195 340 0 0 chr2 216985992 216986039 -36270544 - MIR SINE MIR -132 76 30 639 240 125 35 chr2 216986058 216986346 -36270237 + MER113 DNA MER1_type? 1 314 -207 180 200 0 0 chr2 216986353 216986393 -36270190 + GA-rich Low_complexity Low_complexity 4 43 0 456 230 68 34 chr2 216986396 216986544 -36270039 + MER113 DNA MER1_type? 307 459 -62 261 0 0 0 chr2 216987061 216987090 -36269493 + (CA)n Simple_repeat Simple_repeat 2 30 0 342 0 0 0 chr2 216987610 216987648 -36268935 + (CA)n Simple_repeat Simple_repeat 2 39 0 204 296 0 57 chr2 216988393 216988481 -36268102 - MIR SINE MIR -61 147 65 188 265 0 20 chr2 216990030 216990079 -36266504 - L2 LINE L2 -16 3256 3209 224 211 39 0 chr2 216990104 216990156 -36266427 - MIR SINE MIR -71 137 84 215 313 15 0 chr2 216990207 216990274 -36266309 - MIR3 SINE MIR -35 173 106 551 243 73 77 chr2 216990368 216990627 -36265956 + MIR SINE MIR 2 259 -3 203 289 24 48 chr2 216990690 216990773 -36265810 + MIR SINE MIR 66 146 -116 560 167 32 25 chr2 216992244 216992371 -36264212 - MER5B DNA MER1_type 0 178 1 222 37 0 0 chr2 216992557 216992584 -36263999 + (A)n Simple_repeat Simple_repeat 1 27 0 232 305 53 53 chr2 216994224 216994411 -36262172 + MIR3 SINE MIR 18 204 -4 204 40 0 0 chr2 216994761 216994786 -36261797 + (TTTC)n Simple_repeat Simple_repeat 4 28 0 188 143 24 0 chr2 216998735 216998777 -36257806 + GA-rich Low_complexity Low_complexity 1 43 0 195 129 0 0 chr2 217001347 217001378 -36255205 + (TTCCC)n Simple_repeat Simple_repeat 1 31 0 189 195 0 0 chr2 217001411 217001452 -36255131 + C-rich Low_complexity Low_complexity 3 43 0 22 0 0 0 chr2 217001706 217001728 -36254855 + GC_rich Low_complexity Low_complexity 1 22 0 214 250 33 11 chr2 217002229 217002321 -36254262 + C-rich Low_complexity Low_complexity 1 94 0 331 353 74 21 chr2 217003047 217003237 -36253346 + MIR SINE MIR 63 262 0 594 277 89 19 chr2 217003623 217003836 -36252747 - MIR SINE MIR 0 262 35 411 281 66 57 chr2 217004274 217004500 -36252083 - MIR SINE MIR -5 257 22 15140 137 39 8 chr2 217004889 217007232 -36249351 + Tigger1 DNA MER2_type 3 2418 0 814 192 130 17 chr2 217007338 217007553 -36249030 + MER39 LTR ERV1 2 274 -433 1752 153 23 13 chr2 217007598 217007899 -36248684 + MER39 LTR ERV1 399 702 -5 228 316 128 17 chr2 217009482 217009599 -36246984 - L3 LINE CR1 -15 1562 1433 22 56 0 0 chr2 217009729 217009765 -36246818 + AT_rich Low_complexity Low_complexity 1 36 0 2542 45 0 6 chr2 217010416 217010729 -36245854 + AluY SINE Alu 1 311 0 33 73 0 0 chr2 217011182 217011250 -36245333 + AT_rich Low_complexity Low_complexity 1 68 0 255 31 0 0 chr2 217012299 217012331 -36244252 + (TG)n Simple_repeat Simple_repeat 2 33 0 676 270 97 26 chr2 217012403 217012629 -36243954 - MIR SINE MIR -13 249 8 221 264 46 69 chr2 217012671 217012758 -36243825 + L2 LINE L2 3223 3307 -6 839 284 31 63 chr2 217013213 217013562 -36243021 - MER102b DNA MER1_type -3 338 1 325 347 56 44 chr2 217013620 217013871 -36242712 - L3 LINE CR1 -84 1493 1240 708 306 158 22 chr2 217013897 217014257 -36242326 - L3 LINE CR1 -489 1088 680 740 276 96 8 chr2 217014259 217014498 -36242085 - MIR SINE MIR 0 262 3 2256 97 0 0 chr2 217014571 217014859 -36241724 + AluSg SINE Alu 22 309 -1 2451 98 0 0 chr2 217014877 217015183 -36241400 + AluSc SINE Alu 1 306 -3 267 300 30 22 chr2 217015209 217015327 -36241256 - MIR SINE MIR -63 145 37 1178 166 66 122 chr2 217015617 217016028 -36240555 - MLT1B LTR MaLR 0 390 3 279 218 89 57 chr2 217016200 217016324 -36240259 + MLT1L LTR MaLR 377 608 -7 2227 138 21 10 chr2 217016474 217016858 -36239725 + L1PA16 LINE L1 5770 6157 -9 391 234 27 0 chr2 217017362 217017473 -36239110 + MER96 DNA MER1_type? 62 175 0 360 0 0 0 chr2 217018790 217018830 -36237753 + (CA)n Simple_repeat Simple_repeat 2 41 0 243 0 0 0 chr2 217018829 217018856 -36237727 + (TC)n Simple_repeat Simple_repeat 1 27 0 * 2336 94 3 0 chr2 217019301 217019608 -36236975 + AluSx SINE Alu 5 312 0 467 289 155 61 chr2 217020603 217021084 -36235499 + MLT1K LTR MaLR 3 536 -52 2482 81 0 3 chr2 217021084 217021391 -36235192 + AluSq SINE Alu 2 307 -6 467 289 155 61 chr2 217021391 217021418 -36235165 + MLT1K LTR MaLR 536 559 -29 2599 185 50 10 chr2 217021981 217022500 -36234083 - MLT1F LTR MaLR -2 540 1 205 277 25 67 chr2 217022548 217022667 -36233916 - L2 LINE L2 -944 2370 2257 524 208 65 32 chr2 217023053 217023207 -36233376 + LTR45B LTR ERV1 331 489 0 271 308 184 11 chr2 217023210 217023395 -36233188 - L2 LINE L2 -1080 2234 2018 2016 120 90 33 chr2 217024708 217025075 -36231508 + MLT1B LTR MaLR 3 390 0 333 231 7 56 chr2 217025926 217026069 -36230514 - Charlie7 DNA MER1_type -40 2572 2437 326 289 96 26 chr2 217026580 217026736 -36229847 + HAL1b LINE L1 1018 1184 -164 484 323 7 19 chr2 217027269 217027424 -36229159 - MIR3 SINE MIR -1 207 55 3567 76 10 4 chr2 217027435 217027922 -36228661 - L1PA12 LINE L1 0 6168 5679 2489 62 12 0 chr2 217027922 217028262 -36228321 + L1PA12 LINE L1 5320 5663 -500 22 0 0 0 chr2 217030125 217030147 -36226436 + AT_rich Low_complexity Low_complexity 1 22 0 2337 83 0 38 chr2 217030765 217031078 -36225505 - AluSq SINE Alu -12 301 1 379 318 9 0 chr2 217031821 217031931 -36224652 - L2 LINE L2 -2 3270 3160 1297 99 0 0 chr2 217032633 217032795 -36223788 + AluSc SINE Alu 1 162 -147 490 318 82 24 chr2 217032830 217033130 -36223453 + L2 LINE L2 2736 3053 -219 250 185 19 0 chr2 217034132 217034186 -36222397 + (TCTA)n Simple_repeat Simple_repeat 2 56 0 512 309 53 10 chr2 217036518 217036725 -36219858 - MIR SINE MIR -44 218 3 469 269 109 43 chr2 217037404 217037756 -36218827 - L1MC4a LINE L1 -104 6017 5642 227 278 0 139 chr2 217038072 217038187 -36218396 - L2 LINE L2 -202 3070 2972 596 308 26 34 chr2 217038487 217038721 -36217862 - MIR SINE MIR 0 262 31 229 378 70 6 chr2 217038919 217039075 -36217508 + MIR3 SINE MIR 36 201 -7 377 247 169 87 chr2 217039215 217039446 -36217137 - MIR SINE MIR -10 252 3 1139 124 0 32 chr2 217039661 217039846 -36216737 + AluSg/x SINE Alu 118 296 -14 645 289 39 31 chr2 217040734 217040990 -36215593 + MIR SINE MIR 5 262 0 353 346 88 19 chr2 217040995 217041192 -36215391 - MIR SINE MIR -46 216 3 853 161 0 0 chr2 217042375 217042499 -36214084 - FLAM_C SINE Alu -19 124 1 543 262 89 12 chr2 217042520 217042688 -36213895 + MIR SINE MIR 30 210 -52 198 191 0 0 chr2 217044302 217044349 -36212234 + (CAT)n Simple_repeat Simple_repeat 2 48 0 247 250 0 0 chr2 217044350 217044410 -36212173 - MER46C DNA MER2_type -2 336 277 416 187 121 82 chr2 217044442 217044624 -36211959 - MER46C DNA MER2_type -146 192 4 188 359 160 0 chr2 217044634 217044765 -36211818 - MIR SINE MIR -25 237 86 7658 203 80 8 chr2 217044827 217046977 -36209606 + L1PA16 LINE L1 3180 5491 -675 733 161 29 0 chr2 217046977 217047114 -36209469 + FLAM_C SINE Alu 3 143 0 3227 85 4 4 chr2 217047114 217047571 -36209012 + L1PA16 LINE L1 5492 5948 -218 1166 147 25 0 chr2 217047662 217047860 -36208723 + L1PA16 LINE L1 5955 6157 -9 788 215 70 0 chr2 217047879 217048051 -36208532 + AluJo SINE Alu 117 300 -12 29 60 0 0 chr2 217048379 217048429 -36208154 + AT_rich Low_complexity Low_complexity 1 50 0 572 321 56 19 chr2 217052379 217052594 -36203989 + MIR SINE MIR 35 257 -5 771 211 79 15 chr2 217052604 217052869 -36203714 - HsTC2 DNA Tc2 0 1900 1619 180 0 0 0 chr2 217052869 217052889 -36203694 + (T)n Simple_repeat Simple_repeat 1 20 0 399 217 61 9 chr2 217052910 217053025 -36203558 - MER110 LTR ERV1 -22 469 349 454 84 99 0 chr2 217053085 217053156 -36203427 + MADE1 DNA Mariner 1 78 -2 346 219 0 0 chr2 217053305 217053378 -36203205 - HsTC2 DNA Tc2 -292 1606 1534 377 196 167 10 chr2 217053452 217053554 -36203029 - HsTC2 DNA Tc2 -1777 121 4 632 194 52 19 chr2 217056069 217056224 -36200359 + MIR SINE MIR 29 188 -74 338 206 351 8 chr2 217056235 217056366 -36200217 - MIR SINE MIR -1 261 86 356 263 0 0 chr2 217056645 217056725 -36199858 + MIR SINE MIR 183 262 0 509 256 143 103 chr2 217058920 217059241 -36197342 + MER102b DNA MER1_type 7 340 -1 2319 89 0 0 chr2 217059244 217059546 -36197037 - AluSc SINE Alu -7 302 1 933 201 6 0 chr2 217061455 217061634 -36194949 + MER3 DNA MER1_type 1 180 -29 256 185 74 133 chr2 217061800 217061935 -36194648 - MIR SINE MIR -24 238 112 448 251 217 24 chr2 217063632 217063839 -36192744 - MIR SINE MIR 0 262 16 581 281 125 48 chr2 217064185 217064538 -36192045 + MLT1L LTR MaLR 234 613 -2 265 292 160 32 chr2 217064609 217064921 -36191662 + L2 LINE L2 2844 3195 -118 213 229 21 10 chr2 217065026 217065122 -36191461 + CT-rich Low_complexity Low_complexity 3 99 0 705 259 57 32 chr2 217067709 217067849 -36188734 + LTR16A LTR ERVL 148 298 -152 208 0 62 0 chr2 217067849 217067881 -36188702 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 705 259 57 32 chr2 217067881 217067987 -36188596 + LTR16A LTR ERVL 298 400 -50 186 43 0 0 chr2 217067994 217068017 -36188566 + (A)n Simple_repeat Simple_repeat 1 23 0 2108 114 0 19 chr2 217068318 217068625 -36187958 + AluSx SINE Alu 1 301 -11 1884 198 13 35 chr2 217068690 217069063 -36187520 + MLT1A1 LTR MaLR 1 365 0 207 365 24 0 chr2 217070679 217070764 -36185819 - MIR3 SINE MIR -21 187 101 1384 224 22 46 chr2 217070775 217071146 -36185437 - MLT1A1 LTR MaLR -3 362 1 291 263 0 50 chr2 217071319 217071399 -36185184 - L2 LINE L2 -3 3310 3235 259 308 4 18 chr2 217071771 217071908 -36184675 + A-rich Low_complexity Low_complexity 1 218 0 253 329 111 56 chr2 217072141 217072375 -36184208 + L2 LINE L2 3024 3270 -2 894 173 0 13 chr2 217075698 217075848 -36180735 + AluJb SINE Alu 129 276 -36 211 200 22 0 chr2 217075857 217075902 -36180681 + GA-rich Low_complexity Low_complexity 3 48 0 1550 230 83 49 chr2 217076361 217076892 -36179691 + MLT1H LTR MaLR 1 549 0 1662 294 181 10 chr2 217076941 217078161 -36178422 - L2 LINE L2 -5 3308 1878 444 248 26 9 chr2 217078384 217078497 -36178086 + L2 LINE L2 3199 3313 0 395 294 50 8 chr2 217079562 217079681 -36176902 - L3 LINE CR1 -1190 387 264 225 0 0 0 chr2 217079782 217079807 -36176776 + (CA)n Simple_repeat Simple_repeat 2 26 0 259 304 113 26 chr2 217079841 217079956 -36176627 - L2 LINE L2 0 3272 3148 526 324 99 20 chr2 217080087 217080233 -36176350 - L2 LINE L2 -353 2961 2828 751 182 8 0 chr2 217080233 217080365 -36176218 - MER94 DNA DNA 0 134 2 526 324 99 20 chr2 217080365 217080561 -36176022 - L2 LINE L2 -486 2828 2592 1076 267 48 24 chr2 217080710 217081081 -36175502 + LTR16A LTR ERVL 59 438 -12 210 181 69 56 chr2 217081976 217082048 -36174535 - L2 LINE L2 0 3313 3241 368 310 102 16 chr2 217082430 217082617 -36173966 + MIR SINE MIR 57 259 -3 231 36 0 0 chr2 217082639 217082667 -36173916 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 795 293 80 60 chr2 217082672 217083339 -36173244 - L2 LINE L2 -14 3299 2540 7416 119 33 13 chr2 217083339 217084544 -36172039 + Tigger3b DNA MER2_type 3 1231 0 795 293 80 60 chr2 217084544 217084717 -36171866 - L2 LINE L2 -773 2540 2372 2168 197 26 24 chr2 217084939 217085405 -36171178 + MLT1C LTR MaLR 1 467 0 1556 163 18 11 chr2 217086171 217086186 -36170397 - AluJb SINE Alu -16 296 283 369 0 0 0 chr2 217086186 217086227 -36170356 + (TG)n Simple_repeat Simple_repeat 1 41 0 1556 163 18 11 chr2 217086227 217086493 -36170090 - AluJb SINE Alu -29 283 13 973 200 6 6 chr2 217086506 217086686 -36169897 - MIR SINE MIR -32 230 51 289 274 11 21 chr2 217086770 217086865 -36169718 + CT-rich Low_complexity Low_complexity 3 96 0 197 367 123 45 chr2 217089081 217089503 -36167080 - L2 LINE L2 -343 2971 2517 218 264 19 0 chr2 217091447 217091500 -36165083 + GA-rich Low_complexity Low_complexity 2 55 0 1787 130 78 81 chr2 217094875 217095259 -36161324 - MLT1B LTR MaLR -7 383 1 511 184 68 41 chr2 217097517 217097664 -36158919 + MLT1K LTR MaLR 431 581 -7 1961 129 3 0 chr2 217097666 217097953 -36158630 + AluSq SINE Alu 1 288 -25 394 307 34 28 chr2 217097989 217098165 -36158418 + MIR3 SINE MIR 17 193 -15 834 131 0 29 chr2 217098816 217098953 -36157630 + FLAM_C SINE Alu 1 133 0 485 308 7 7 chr2 217099491 217099634 -36156949 + LTR16C LTR ERVL 347 489 -2 2454 48 0 0 chr2 217100052 217100344 -36156239 + AluY SINE Alu 1 292 -19 609 264 158 83 chr2 217102555 217102873 -36153710 + L2 LINE L2 1376 1669 -1645 1670 169 3 29 chr2 217102873 217103187 -36153396 + AluJb SINE Alu 1 306 -6 609 264 158 83 chr2 217103187 217103204 -36153379 + L2 LINE L2 1669 1683 -1631 2156 104 0 7 chr2 217103204 217103513 -36153070 + AluSc SINE Alu 2 308 -1 609 264 158 83 chr2 217103513 217103683 -36152900 + L2 LINE L2 1683 1920 -1394 492 218 24 128 chr2 217103690 217103901 -36152682 + L2 LINE L2 3123 3311 -2 512 286 42 24 chr2 217104097 217104265 -36152318 - MIR SINE MIR -6 256 86 943 94 55 39 chr2 217104604 217104785 -36151798 - MER53 DNA DNA -4 185 2 212 328 16 0 chr2 217105020 217105084 -36151499 + MIR SINE MIR 79 143 -119 196 266 165 28 chr2 217105137 217105246 -36151337 - L2 LINE L2 -247 3066 2943 699 201 93 129 chr2 217105605 217105993 -36150590 + MLT1A2 LTR MaLR 1 374 0 258 193 0 0 chr2 217106578 217106635 -36149948 + (TGGA)n Simple_repeat Simple_repeat 1 57 0 849 286 157 19 chr2 217106947 217107682 -36148901 - L2 LINE L2 0 3313 2472 202 220 34 17 chr2 217108270 217108329 -36148254 + GA-rich Low_complexity Low_complexity 3 62 0 2320 120 24 26 chr2 217108478 217108861 -36147722 - L1PA16 LINE L1 -16 6150 5769 7889 11 0 0 chr2 217108873 217109752 -36146831 - L1PA2 LINE L1 0 6155 5277 457 113 0 0 chr2 217109751 217109813 -36146770 - L1PA16 LINE L1 -397 5769 5708 * 247 170 64 0 chr2 217112114 217112161 -36144422 + L2 LINE L2 3215 3264 -8 232 270 174 35 chr2 217112536 217112795 -36143788 + LTR16A LTR ERVL 90 384 -66 302 320 204 0 chr2 217113095 217113242 -36143341 - MER5B DNA MER1_type 0 178 2 185 200 133 78 chr2 217113242 217113293 -36143290 + L3 LINE CR1 1521 1576 -1 1972 135 48 0 chr2 217113808 217114097 -36142486 - AluSx SINE Alu -9 303 1 2143 112 7 0 chr2 217114535 217114820 -36141763 + AluSx SINE Alu 1 287 -25 402 244 100 1 chr2 217114898 217115070 -36141513 - L1MC/D LINE L1 -303 5818 5624 200 356 119 0 chr2 217115740 217115858 -36140725 + MIR SINE MIR 53 184 -78 866 261 67 39 chr2 217116144 217116638 -36139945 + L1ME4a LINE L1 5610 6117 -4 975 168 13 91 chr2 217116809 217117041 -36139542 - MER20 DNA MER1_type -5 214 1 183 330 165 0 chr2 217117089 217117186 -36139397 + MIR3 SINE MIR 92 204 -4 661 332 61 40 chr2 217117296 217117691 -36138892 - L2 LINE L2 0 3313 2911 198 0 0 0 chr2 217119071 217119093 -36137490 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 467 265 73 0 chr2 217120624 217120775 -36135808 - MIR SINE MIR -9 253 92 1306 253 46 10 chr2 217123298 217123713 -36132870 + L1ME3A LINE L1 5734 6163 -7 675 200 15 15 chr2 217123713 217123843 -36132740 + AluJo SINE Alu 116 245 -67 24 32 0 0 chr2 217123844 217123875 -36132708 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr2 217124072 217124093 -36132490 + AT_rich Low_complexity Low_complexity 1 21 0 237 329 0 0 chr2 217124942 217125018 -36131565 + MIR SINE MIR 48 123 -85 414 245 0 10 chr2 217125771 217125873 -36130710 + L3b LINE CR1 1129 1229 -354 233 333 0 0 chr2 217126357 217126435 -36130148 + L2 LINE L2 2432 2509 -805 414 253 41 72 chr2 217126567 217126761 -36129822 + MER5A DNA MER1_type 1 188 -1 1088 239 62 32 chr2 217126873 217127274 -36129309 + L1ME3 LINE L1 5746 6158 -4 227 341 32 32 chr2 217127343 217127469 -36129114 + L2 LINE L2 2742 2867 -447 1605 192 88 19 chr2 217127655 217128087 -36128496 + MLT1C LTR MaLR 6 467 0 2004 229 31 49 chr2 217128163 217128714 -36127869 + MLT1F LTR MaLR 1 541 -1 186 103 0 0 chr2 217128832 217128861 -36127722 + (CA)n Simple_repeat Simple_repeat 2 30 0 182 167 0 28 chr2 217129503 217129539 -36127044 - MIR3 SINE MIR -28 180 146 411 280 161 0 chr2 217129963 217130081 -36126502 - MIR SINE MIR -113 149 13 315 0 0 0 chr2 217130089 217130124 -36126459 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 6048 91 12 0 chr2 217130137 217131021 -36125562 - L1PA11 LINE L1 0 6174 5280 534 117 0 0 chr2 217131023 217131100 -36125483 - AluS SINE Alu -8 303 227 960 122 7 14 chr2 217131100 217131247 -36125336 - AluSq/x SINE Alu -166 146 1 4530 252 66 53 chr2 217131548 217133057 -36123526 + L1M4b LINE L1 25 1514 -5624 1442 209 0 51 chr2 217133057 217133372 -36123211 + AluJo SINE Alu 2 300 -2 4530 252 66 53 chr2 217133372 217133728 -36122855 + L1M4b LINE L1 1514 1864 -5274 1893 159 3 0 chr2 217133728 217134011 -36122572 + AluJb SINE Alu 3 286 -26 4530 252 66 53 chr2 217134011 217134642 -36121941 + L1M4b LINE L1 1864 2702 -4436 10500 219 40 24 chr2 217134654 217135024 -36121559 + L1MB8 LINE L1 1733 2096 -4151 1144 195 11 18 chr2 217135024 217135296 -36121287 + L1MC2 LINE L1 6063 6332 -12 10500 219 40 24 chr2 217135296 217137083 -36119500 + L1MB8 LINE L1 2096 3854 -2393 1998 136 7 0 chr2 217137083 217137363 -36119220 + AluSx SINE Alu 19 300 -12 10500 219 40 24 chr2 217137363 217139710 -36116873 + L1MB8 LINE L1 3854 6241 -6 1566 217 8 5 chr2 217139716 217140094 -36116489 + L1MC3 LINE L1 7400 7778 -7 243 0 0 0 chr2 217140293 217140320 -36116263 + (A)n Simple_repeat Simple_repeat 1 27 0 182 388 39 39 chr2 217140827 217140930 -36115653 - L2 LINE L2 -20 3252 3150 200 188 0 0 chr2 217140990 217141022 -36115561 + polypurine Low_complexity Low_complexity 4 35 0 461 319 71 22 chr2 217141158 217141384 -36115199 - MIR SINE MIR -8 254 18 319 314 85 26 chr2 217142708 217142861 -36113722 - MIR3 SINE MIR -7 201 40 464 227 15 8 chr2 217142995 217143127 -36113456 - MER69 DNA AcHobo 0 2526 2394 1119 133 0 0 chr2 217143154 217143312 -36113271 + FRAM SINE Alu 1 157 -19 1162 185 62 35 chr2 217143325 217143666 -36112917 - MER69 DNA AcHobo -165 2361 2012 291 245 75 11 chr2 217143663 217143757 -36112826 - MER69 DNA AcHobo -1953 573 474 * 566 330 91 5 chr2 217143789 217143998 -36112585 + MER115 DNA AcHobo 42 268 -425 387 218 0 0 chr2 217144037 217144115 -36112468 - MER69 DNA AcHobo -1147 79 2 405 0 0 0 chr2 217145404 217145449 -36111134 + (CA)n Simple_repeat Simple_repeat 1 45 0 186 305 84 32 chr2 217147207 217147302 -36109281 + MIR3 SINE MIR 12 111 -97 * 759 298 16 12 chr2 217147286 217147541 -36109042 + L2 LINE L2 2716 2971 -343 222 219 0 0 chr2 217147722 217147763 -36108820 - L2 LINE L2 0 3272 3232 571 297 61 44 chr2 217147870 217148166 -36108417 + L2 LINE L2 3012 3312 -1 321 291 0 0 chr2 217148182 217148261 -36108322 + MIR SINE MIR 84 162 -100 843 226 4 88 chr2 217149782 217150021 -36106562 + MIR SINE MIR 20 238 -24 400 288 98 64 chr2 217150839 217151290 -36105293 + L1MC4 LINE L1 7358 7823 -219 2130 124 86 47 chr2 217152052 217152480 -36104103 - MER65A LTR ERV1 0 445 1 669 322 187 5 chr2 217153300 217153800 -36102783 - L2 LINE L2 -19 3294 2683 181 300 0 0 chr2 217153824 217153874 -36102709 - L3b LINE CR1 -211 1372 1323 2384 67 3 7 chr2 217154251 217154551 -36102032 + AluY SINE Alu 1 299 -12 2282 251 86 34 chr2 217154563 217155424 -36101159 + L1M4b LINE L1 31 936 -5923 682 194 9 92 chr2 217155854 217156071 -36100512 + L1M4b LINE L1 1205 1403 -5456 * 4831 163 31 55 chr2 217156061 217156981 -36099602 + L1MC3 LINE L1 6679 7567 -218 3014 156 13 0 chr2 217156981 217157508 -36099075 + L1MB3 LINE L1 5640 6173 -10 4831 163 31 55 chr2 217157508 217157722 -36098861 + L1MC3 LINE L1 7567 7785 0 951 211 4 53 chr2 217157715 217158053 -36098530 + L1M4b LINE L1 2892 3168 -3789 * 789 259 31 0 chr2 217158102 217158326 -36098257 - LTR52 LTR ERVL -24 397 167 2402 112 0 6 chr2 217158437 217158751 -36097832 + AluSx SINE Alu 1 312 0 350 357 154 30 chr2 217159109 217159745 -36096838 - L2 LINE L2 -358 2956 2242 2115 108 58 0 chr2 217160060 217160355 -36096228 + AluSx SINE Alu 1 312 0 1936 176 0 0 chr2 217160370 217160682 -36095901 + AluSx SINE Alu 1 312 0 2487 61 0 0 chr2 217161125 217161420 -36095163 + AluY SINE Alu 14 308 -3 650 299 60 0 chr2 217161637 217161854 -36094729 + L1MC/D LINE L1 5555 5784 -2024 396 253 246 37 chr2 217162821 217163118 -36093465 - L2 LINE L2 -5 3308 2950 601 256 76 47 chr2 217163723 217163934 -36092649 - MIR SINE MIR -10 252 36 312 180 0 112 chr2 217164103 217164192 -36092391 + MER96 DNA MER1_type? 97 175 0 1512 254 68 2 chr2 217164196 217164594 -36091989 - L2 LINE L2 -453 2861 2438 470 366 83 14 chr2 217164595 217165147 -36091436 - L2 LINE L2 -1359 1955 1366 304 325 45 32 chr2 217166597 217166751 -36089832 + MIR3 SINE MIR 42 197 -11 1898 154 97 12 chr2 217166967 217167286 -36089297 + MER7A DNA MER2_type 2 345 -1 575 239 28 0 chr2 217168904 217169013 -36087570 + MER81 DNA DNA 3 114 0 269 317 30 54 chr2 217169138 217169305 -36087278 + MIR SINE MIR 5 167 -95 210 242 0 16 chr2 217169645 217169707 -36086876 + (CA)n Simple_repeat Simple_repeat 2 62 0 1033 98 0 26 chr2 217171300 217171453 -36085130 - AluSg/x SINE Alu -3 309 161 442 287 126 64 chr2 217171550 217172162 -36084421 + L1M4 LINE L1 4209 4850 -1296 267 354 92 6 chr2 217172190 217172354 -36084229 - MIR SINE MIR -50 212 35 182 61 0 61 chr2 217172614 217172647 -36083936 + (CCCCCA)n Simple_repeat Simple_repeat 4 34 0 481 163 8 122 chr2 217172873 217172996 -36083587 - MER58A DNA MER1_type 0 146 38 273 235 0 0 chr2 217173142 217173193 -36083390 - MIR SINE MIR -129 79 29 277 259 62 0 chr2 217174891 217174972 -36081611 + MIR SINE MIR 106 191 -71 28 48 0 0 chr2 217175017 217175059 -36081524 + AT_rich Low_complexity Low_complexity 1 42 0 942 219 61 16 chr2 217175226 217175473 -36081110 - L1ME3A LINE L1 -12 6158 5901 720 212 8 0 chr2 217175593 217175725 -36080858 + MER94 DNA DNA 1 133 -1 320 318 119 8 chr2 217175885 217176011 -36080572 - L2 LINE L2 -10 3262 3123 715 218 79 6 chr2 217176177 217176342 -36080241 + MER5B DNA MER1_type 1 177 -1 21 0 0 0 chr2 217176522 217176543 -36080040 + AT_rich Low_complexity Low_complexity 1 21 0 43 35 0 0 chr2 217177557 217177614 -36078969 + AT_rich Low_complexity Low_complexity 1 57 0 348 191 0 45 chr2 217178409 217178498 -36078085 + L1MC4 LINE L1 7447 7531 -511 1985 147 0 0 chr2 217178970 217179255 -36077328 + AluSx SINE Alu 6 290 -22 23 33 0 0 chr2 217179264 217179294 -36077289 + AT_rich Low_complexity Low_complexity 1 30 0 31787 107 16 57 chr2 217179506 217185914 -36070669 + L1PA7 LINE L1 12 6154 0 206 244 0 0 chr2 217186325 217186366 -36070217 + (CATATA)n Simple_repeat Simple_repeat 2 42 0 2209 178 67 25 chr2 217186413 217186927 -36069656 - MER39 LTR ERV1 0 707 4 32 75 0 0 chr2 217187064 217187131 -36069452 + AT_rich Low_complexity Low_complexity 1 67 0 1995 145 7 0 chr2 217187162 217187452 -36069131 - AluSx SINE Alu -20 292 1 342 0 0 0 chr2 217187466 217187504 -36069079 + (TG)n Simple_repeat Simple_repeat 2 39 0 355 342 115 0 chr2 217187727 217187782 -36068801 - MIR SINE MIR 0 262 215 2072 111 11 0 chr2 217187782 217188084 -36068499 - AluSx SINE Alu 0 305 1 355 342 115 0 chr2 217188084 217188233 -36068350 - MIR SINE MIR -47 215 34 237 108 0 0 chr2 217189750 217189787 -36066796 + (TG)n Simple_repeat Simple_repeat 2 38 0 326 303 10 0 chr2 217190053 217190152 -36066431 + CT-rich Low_complexity Low_complexity 3 102 0 210 171 0 0 chr2 217190979 217191020 -36065563 + CT-rich Low_complexity Low_complexity 1 41 0 551 271 160 18 chr2 217191535 217191760 -36064823 - MIR SINE MIR 0 262 6 248 242 0 0 chr2 217193754 217193820 -36062763 + A-rich Low_complexity Low_complexity 1 66 0 1266 194 114 21 chr2 217193855 217194144 -36062439 - MER2 DNA MER2_type 0 345 30 345 243 29 68 chr2 217194158 217194261 -36062322 - MIR SINE MIR -51 157 59 360 287 76 0 chr2 217195959 217196072 -36060511 + MIR SINE MIR 31 150 -68 4535 185 34 24 chr2 217196210 217196449 -36060134 - L1MB8 LINE L1 0 6178 5943 1546 136 62 12 chr2 217196449 217196692 -36059891 - AluSx SINE Alu -20 292 38 4535 185 34 24 chr2 217196692 217198017 -36058566 - L1MB8 LINE L1 -235 5943 4608 227 231 15 46 chr2 217198631 217198696 -36057887 + GA-rich Low_complexity Low_complexity 4 66 0 431 260 31 8 chr2 217199650 217199777 -36056806 - LTR16A LTR ERVL 0 450 321 195 42 0 0 chr2 217199780 217199804 -36056779 + (GGGAA)n Simple_repeat Simple_repeat 5 28 0 1038 266 50 12 chr2 217199807 217200145 -36056438 - LTR16A LTR ERVL -98 352 2 1147 171 132 35 chr2 217201616 217201873 -36054710 + MLT1C LTR MaLR 186 467 0 326 323 65 38 chr2 217201876 217202062 -36054521 + MIR SINE MIR 22 212 -50 2657 170 20 14 chr2 217202340 217202592 -36053991 + L1MC3 LINE L1 7294 7552 -233 2498 150 65 2 chr2 217202592 217202993 -36053590 + MSTB LTR MaLR 1 426 0 2657 170 20 14 chr2 217202993 217203229 -36053354 + L1MC3 LINE L1 7552 7785 0 2078 134 3 0 chr2 217203298 217203596 -36052987 - AluSx SINE Alu -8 304 6 333 125 0 0 chr2 217203692 217203748 -36052835 + (CA)n Simple_repeat Simple_repeat 2 57 0 1503 223 45 68 chr2 217204043 217204513 -36052070 - MLT1C LTR MaLR -8 459 1 390 258 47 38 chr2 217204514 217204825 -36051758 - ERVL LTR ERVL -1657 4032 3686 21 82 0 0 chr2 217206985 217207034 -36049549 + AT_rich Low_complexity Low_complexity 1 49 0 1096 224 144 57 chr2 217207304 217207742 -36048841 - MLT1K LTR MaLR 0 476 1 7564 180 34 11 chr2 217207748 217209483 -36047100 + L1M1 LINE L1 3366 5146 -2419 * 12971 160 26 6 chr2 217209482 217211794 -36044789 + L1MA4 LINE L1 13 2356 -5209 11632 94 5 19 chr2 217211794 217214318 -36042265 - L1PA8 LINE L1 -3 6484 3987 10590 135 27 20 chr2 217214318 217216952 -36039631 - L1PA8 LINE L1 -3782 2679 10 4487 93 16 10 chr2 217216963 217217672 -36038911 + L1MA4 LINE L1 2345 3057 -4508 * 8832 149 30 11 chr2 217217670 217217750 -36038833 + L1MA4 LINE L1 5131 5208 -2511 2114 141 0 0 chr2 217217750 217218047 -36038536 + AluSx SINE Alu 3 299 -13 8832 149 30 11 chr2 217218047 217219726 -36036857 + L1MA4 LINE L1 5208 6961 -758 216 0 0 0 chr2 217219726 217219750 -36036833 + (GA)n Simple_repeat Simple_repeat 2 25 0 8832 149 30 11 chr2 217219750 217220524 -36036059 + L1MA4 LINE L1 6961 7719 0 647 160 167 7 chr2 217220749 217220899 -36035684 - MER2 DNA MER2_type 0 345 172 988 167 56 14 chr2 217220997 217221213 -36035370 - MER2 DNA MER2_type -120 225 1 298 181 0 24 chr2 217221262 217221345 -36035238 + (TA)n Simple_repeat Simple_repeat 2 82 0 1847 182 14 6 chr2 217221352 217221703 -36034880 - MLT2C1 LTR ERVL -43 354 1 438 303 41 21 chr2 217222224 217222452 -36034131 + LTR16C LTR ERVL 255 454 -3 194 286 79 0 chr2 217222908 217222971 -36033612 + L2 LINE L2 3246 3313 0 416 367 103 22 chr2 217224054 217224471 -36032112 - L2 LINE L2 -10 3262 2812 314 319 26 26 chr2 217227158 217227271 -36029312 + L2 LINE L2 3153 3265 -7 26 0 0 0 chr2 217227465 217227491 -36029092 + AT_rich Low_complexity Low_complexity 1 26 0 321 361 62 48 chr2 217227901 217228128 -36028455 - L2 LINE L2 -236 3036 2807 534 266 116 39 chr2 217228554 217228761 -36027822 - MIR SINE MIR -3 259 37 685 261 127 73 chr2 217229407 217229889 -36026694 - L2 LINE L2 0 3313 2806 2466 139 95 13 chr2 217230032 217230507 -36026076 - LTR44 LTR ERV1 -5 514 1 492 312 81 30 chr2 217230595 217230829 -36025754 + MLT1J2 LTR MaLR 201 446 -4 873 274 136 10 chr2 217230832 217231237 -36025346 - L2 LINE L2 -520 2794 2339 3143 25 0 0 chr2 217231371 217231738 -36024845 + L1PA2 LINE L1 5788 6154 -1 289 333 40 0 chr2 217231989 217232088 -36024495 - MIR3 SINE MIR -21 187 85 2884 79 3 0 chr2 217235636 217236016 -36020567 + L1PA10 LINE L1 5784 6164 -4 238 197 197 0 chr2 217236336 217236402 -36020181 - L2 LINE L2 0 3313 3235 410 243 0 0 chr2 217236515 217236618 -36019965 - MLT1L LTR MaLR 0 615 513 1611 224 96 39 chr2 217237419 217237642 -36018941 - LTR40a LTR ERVL -1 518 309 2366 150 59 15 chr2 217237642 217238048 -36018535 + MSTB LTR MaLR 1 424 -2 1611 224 96 39 chr2 217238048 217238314 -36018269 - LTR40a LTR ERVL -210 309 1 246 380 12 12 chr2 217239705 217239876 -36016707 + L2 LINE L2 2866 3036 -236 431 278 26 9 chr2 217239997 217240112 -36016471 + MIR SINE MIR 75 191 -71 208 327 65 19 chr2 217240719 217240826 -36015757 + L2 LINE L2 3126 3237 -35 342 0 0 0 chr2 217241513 217241551 -36015032 + (TG)n Simple_repeat Simple_repeat 2 39 0 2163 168 5 20 chr2 217242174 217242568 -36014015 - MLT1B LTR MaLR 0 390 3 210 91 0 0 chr2 217242733 217242766 -36013817 + (A)n Simple_repeat Simple_repeat 1 33 0 353 246 218 24 chr2 217243030 217243221 -36013362 + MIR SINE MIR 32 256 -6 22 70 0 0 chr2 217244183 217244226 -36012357 + AT_rich Low_complexity Low_complexity 1 43 0 426 20 0 0 chr2 217244645 217244696 -36011887 + (CA)n Simple_repeat Simple_repeat 2 52 0 374 337 10 0 chr2 217245022 217245120 -36011463 - L2 LINE L2 -53 3219 3121 634 335 5 0 chr2 217245190 217245405 -36011178 - L2 LINE L2 -557 2757 2542 197 311 0 16 chr2 217246437 217246498 -36010085 - L2 LINE L2 -219 3053 2994 3162 131 8 4 chr2 217246716 217247228 -36009355 + Tigger1 DNA MER2_type 33 546 -1872 1236 247 0 26 chr2 217247223 217247535 -36009048 + MLT1A2 LTR MaLR 71 374 0 * 233 281 22 34 chr2 217247538 217247627 -36008956 + L2 LINE L2 2966 3053 -219 251 250 28 28 chr2 217248564 217248636 -36007947 + MIR3 SINE MIR 125 196 -12 561 66 13 0 chr2 217249027 217249103 -36007480 - MADE1 DNA Mariner 0 80 4 1995 152 0 0 chr2 217249123 217249437 -36007146 - AluSx SINE Alu 0 314 1 658 232 84 33 chr2 217249455 217249666 -36006917 - MIR SINE MIR -10 252 20 1666 194 7 0 chr2 217249713 217250002 -36006581 + AluJo SINE Alu 1 291 -21 338 215 156 81 chr2 217250365 217250551 -36006032 - MIR SINE MIR -47 215 16 230 342 121 45 chr2 217250657 217251037 -36005546 - L2 LINE L2 -1729 1585 1177 946 255 36 8 chr2 217251203 217251450 -36005133 + MIR SINE MIR 9 262 0 676 300 52 26 chr2 217252475 217252742 -36003841 - Charlie8 DNA MER1_type -2142 275 2 361 267 12 0 chr2 217253447 217253533 -36003050 + L2 LINE L2 3186 3272 0 423 125 0 0 chr2 217254204 217254276 -36002307 + (TC)n Simple_repeat Simple_repeat 1 72 0 30 0 0 0 chr2 217256004 217256034 -36000549 + AT_rich Low_complexity Low_complexity 1 30 0 262 339 43 43 chr2 217256452 217256638 -35999945 - L2 LINE L2 -15 3257 3072 2081 162 3 0 chr2 217258004 217258313 -35998270 - AluJb SINE Alu -2 310 1 299 286 126 8 chr2 217258415 217258534 -35998049 - MIR SINE MIR -119 143 11 1052 191 0 0 chr2 217258684 217258857 -35997726 - AluJb SINE Alu -3 309 137 414 0 0 0 chr2 217258857 217258903 -35997680 + (TG)n Simple_repeat Simple_repeat 1 46 0 417 97 0 0 chr2 217258903 217258975 -35997608 + (GA)n Simple_repeat Simple_repeat 2 73 0 833 145 0 0 chr2 217258982 217259099 -35997484 - FLAM_C SINE Alu -16 117 1 711 224 52 33 chr2 217259194 217259404 -35997179 - MLT1H1 LTR MaLR 0 555 342 536 256 41 0 chr2 217259706 217259827 -35996756 + L2 LINE L2 3188 3313 0 2382 217 91 9 chr2 217259911 217260505 -35996078 - L1ME3A LINE L1 -144 6026 5347 1093 179 112 164 chr2 217260505 217261031 -35995552 - MLT1D LTR MaLR -2 503 5 2382 217 91 9 chr2 217261031 217261212 -35995371 - L1ME3A LINE L1 -823 5347 5182 4327 163 50 66 chr2 217261494 217262738 -35993845 + L1MB8 LINE L1 4598 5860 -318 1224 172 176 19 chr2 217262738 217263005 -35993578 + AluJb SINE Alu 1 309 -3 2504 80 3 0 chr2 217263005 217263316 -35993267 + AluSp SINE Alu 1 312 -1 4327 163 50 66 chr2 217263316 217263640 -35992943 + L1MB8 LINE L1 5858 6173 -5 356 276 105 13 chr2 217263859 217264011 -35992572 + MIR SINE MIR 47 212 -50 446 288 28 33 chr2 217264036 217264177 -35992406 + MIR SINE MIR 17 156 -66 2197 132 3 0 chr2 217264777 217265088 -35991495 + AluSx SINE Alu 1 312 0 2288 98 0 3 chr2 217265099 217265394 -35991189 + AluSq SINE Alu 1 294 -19 233 292 73 73 chr2 217265415 217265593 -35990990 + L2 LINE L2 3126 3303 -10 205 310 17 0 chr2 217265569 217265627 -35990956 - L2 LINE L2 0 3272 3214 * 2219 104 3 16 chr2 217266103 217266410 -35990173 + AluSx SINE Alu 1 303 -9 343 254 159 24 chr2 217267344 217267522 -35989061 + MIR3 SINE MIR 4 206 -56 23 0 0 0 chr2 217268300 217268323 -35988260 + AT_rich Low_complexity Low_complexity 1 23 0 583 250 8 8 chr2 217269730 217269862 -35986721 - MIR SINE MIR -127 135 4 190 224 0 20 chr2 217270269 217270318 -35986265 - MIR SINE MIR -148 114 67 1687 270 22 0 chr2 217271138 217271545 -35985038 + LTR16C LTR ERVL 76 491 0 30 0 0 0 chr2 217272234 217272264 -35984319 + AT_rich Low_complexity Low_complexity 1 30 0 1587 199 3 0 chr2 217273386 217273672 -35982911 + AluJo SINE Alu 1 287 -25 1009 196 29 0 chr2 217274114 217274287 -35982296 - MER45A DNA AcHobo 0 178 1 349 319 0 0 chr2 217274645 217274764 -35981819 + L2 LINE L2 3195 3313 0 3569 79 20 0 chr2 217275099 217275544 -35981039 - L1PA10 LINE L1 -3 6165 5712 41 69 0 26 chr2 217275882 217275959 -35980624 + AT_rich Low_complexity Low_complexity 1 78 -35 2327 71 4 0 chr2 217275959 217276269 -35980314 - AluY SINE Alu 0 311 1 1985 159 3 3 chr2 217276269 217276570 -35980013 - AluJb SINE Alu -11 301 1 41 69 0 26 chr2 217276570 217276606 -35979977 + AT_rich Low_complexity Low_complexity 76 113 0 690 162 41 10 chr2 217276959 217277115 -35979468 + MLT1E2 LTR MaLR 1 178 -327 1450 219 93 47 chr2 217277152 217277278 -35979305 + MER39 LTR ERV1 5 124 -560 2263 93 7 13 chr2 217277278 217277579 -35979004 + AluSq SINE Alu 1 299 -14 1450 219 93 47 chr2 217277579 217277961 -35978622 + MER39 LTR ERV1 124 684 0 260 261 31 0 chr2 217278212 217278277 -35978306 - MLT1K LTR MaLR -352 236 170 2193 128 0 0 chr2 217278506 217278811 -35977772 - AluSx SINE Alu -7 305 1 806 310 89 55 chr2 217279014 217279488 -35977095 - MLT1K LTR MaLR -88 500 11 2067 154 0 0 chr2 217279567 217279878 -35976705 + AluSx SINE Alu 1 311 -1 2634 217 50 38 chr2 217280491 217281105 -35975478 - MLT1E2 LTR MaLR -4 622 1 46 99 0 0 chr2 217281409 217281560 -35975023 + AT_rich Low_complexity Low_complexity 1 151 0 235 267 12 35 chr2 217282100 217282121 -35974462 + (TATG)n Simple_repeat Simple_repeat 1 21 -63 1999 180 15 6 chr2 217282121 217282460 -35974123 + MER61A LTR ERV1 2 343 0 235 267 12 35 chr2 217282460 217282524 -35974059 + (TATG)n Simple_repeat Simple_repeat 21 84 0 384 339 30 6 chr2 217283146 217283314 -35973269 + MIR3 SINE MIR 30 201 -7 234 282 14 14 chr2 217284077 217284148 -35972435 - MIR SINE MIR -106 156 86 981 189 49 46 chr2 217285831 217286152 -35970431 - MER39 LTR ERV1 -2 644 260 1357 188 24 79 chr2 217286164 217286687 -35969896 + MER39-int LTR ERV1 297 607 -4329 290 149 0 0 chr2 217286690 217286737 -35969846 - MER31A LTR ERV1 -179 306 260 372 224 26 0 chr2 217286748 217286821 -35969762 + MER31A LTR ERV1 11 85 -400 304 106 21 0 chr2 217286821 217286868 -35969715 - MER54B LTR ERVL 0 793 746 283 135 154 0 chr2 217286910 217286962 -35969621 + MER67D LTR ERV1 100 159 -355 2003 161 33 15 chr2 217287004 217287340 -35969243 + MER2 DNA MER2_type 3 344 0 314 193 68 65 chr2 217287399 217287452 -35969131 + MER39-int LTR ERV1 889 940 -3996 2226 101 0 0 chr2 217287452 217287750 -35968833 + AluY SINE Alu 1 298 -13 314 193 68 65 chr2 217287750 217287891 -35968692 + MER39-int LTR ERV1 940 1141 -3795 * 468 210 72 70 chr2 217287886 217288198 -35968385 + MER39-int LTR ERV1 1405 3226 -3105 251 300 0 60 chr2 217288127 217288227 -35968356 + LTR57-int LTR ERVL 1377 1470 -3873 * 2419 93 0 0 chr2 217288230 217288541 -35968042 + AluY SINE Alu 1 311 0 21 0 0 0 chr2 217288549 217288570 -35968013 + AT_rich Low_complexity Low_complexity 1 21 0 2637 82 14 34 chr2 217288581 217288996 -35967587 + L1M1 LINE L1 2112 2518 -5047 6381 117 23 50 chr2 217288999 217289228 -35967355 + L1MA2 LINE L1 5101 5335 -969 1765 166 0 10 chr2 217289228 217289518 -35967065 + AluJb SINE Alu 1 287 -25 6381 117 23 50 chr2 217289518 217289557 -35967026 + L1MA2 LINE L1 5335 5374 -930 2197 107 7 0 chr2 217289557 217289848 -35966735 - AluSp SINE Alu -20 293 1 6381 117 23 50 chr2 217289848 217290212 -35966371 + L1MA2 LINE L1 5374 5746 -558 2577 47 0 0 chr2 217290212 217290508 -35966075 + AluY SINE Alu 1 296 -15 6381 117 23 50 chr2 217290508 217290779 -35965804 + L1MA2 LINE L1 5746 6023 -281 2429 83 0 0 chr2 217290779 217291080 -35965503 + AluY SINE Alu 1 301 -10 6381 117 23 50 chr2 217291080 217291423 -35965160 + L1MA2 LINE L1 6023 6304 0 736 188 76 18 chr2 217291530 217291753 -35964830 + MER39-int LTR ERV1 1702 1937 -2999 2367 97 0 0 chr2 217291822 217292130 -35964453 + AluSg SINE Alu 1 308 -2 8767 186 69 73 chr2 217292282 217292635 -35963948 + MER39-int LTR ERV1 2315 2668 -3663 1776 159 6 35 chr2 217292635 217292949 -35963634 + AluJo SINE Alu 1 305 -7 8767 186 69 73 chr2 217292949 217294244 -35962339 + MER39-int LTR ERV1 2668 3967 -2364 2494 69 0 3 chr2 217294244 217294548 -35962035 - AluSg SINE Alu -7 303 1 8767 186 69 73 chr2 217294548 217295468 -35961115 + MER39-int LTR ERV1 3967 6167 -164 2356 149 105 34 chr2 217295537 217296163 -35960420 + MER39 LTR ERV1 1 707 0 21 0 0 0 chr2 217297580 217297601 -35958982 + AT_rich Low_complexity Low_complexity 1 21 0 1065 208 60 65 chr2 217297680 217297819 -35958764 + L1ME3 LINE L1 5812 5950 -212 2241 117 0 7 chr2 217297819 217298126 -35958457 + AluSx SINE Alu 1 305 -7 1065 208 60 65 chr2 217298126 217298341 -35958242 + L1ME3 LINE L1 5950 6162 0 2949 111 16 30 chr2 217298415 217298608 -35957975 + MSTB LTR MaLR 2 196 -230 2093 103 3 3 chr2 217298608 217298899 -35957684 + AluSg SINE Alu 1 291 -19 2949 111 16 30 chr2 217298899 217299136 -35957447 + MSTB LTR MaLR 196 426 0 325 202 0 114 chr2 217299661 217299775 -35956808 - LTR16A1 LTR ERVL -10 447 347 445 237 50 91 chr2 217299855 217300053 -35956530 - LTR16A1 LTR ERVL -264 193 4 2425 80 0 0 chr2 217300163 217300465 -35956118 + AluSg SINE Alu 1 302 -8 2195 109 23 0 chr2 217300465 217300767 -35955816 + AluSg1 SINE Alu 1 309 0 2345 70 6 22 chr2 217300944 217301257 -35955326 + AluSc SINE Alu 1 308 -1 1636 163 33 10 chr2 217301700 217302001 -35954582 - AluJo SINE Alu -4 308 1 476 269 53 12 chr2 217302093 217302264 -35954319 - LTR33 LTR ERVL -48 473 296 235 289 60 0 chr2 217302397 217302480 -35954103 - LTR33 LTR ERVL -433 88 1 1115 165 0 0 chr2 217302581 217302757 -35953826 + AluSg/x SINE Alu 132 307 -5 369 0 0 0 chr2 217302758 217302799 -35953784 + (CA)n Simple_repeat Simple_repeat 2 42 0 499 319 17 37 chr2 217302850 217303090 -35953493 - MIR SINE MIR -27 235 5 498 211 111 124 chr2 217303093 217303391 -35953192 + MARNA DNA Mariner 128 421 -165 3010 142 111 13 chr2 217303481 217303691 -35952892 - MER21A LTR ERV1 0 931 743 360 0 0 0 chr2 217303691 217303731 -35952852 + (CA)n Simple_repeat Simple_repeat 2 41 0 3010 142 111 13 chr2 217303731 217304265 -35952318 - MER21A LTR ERV1 -188 743 1 180 316 29 52 chr2 217304400 217304536 -35952047 + L2 LINE L2 3138 3270 -2 291 71 0 0 chr2 217305858 217305900 -35950683 + (TG)n Simple_repeat Simple_repeat 2 43 0 442 290 65 0 chr2 217306634 217306803 -35949780 - MIR3 SINE MIR -3 205 26 207 69 0 0 chr2 217307454 217307483 -35949100 + (TTA)n Simple_repeat Simple_repeat 3 31 0 1772 148 7 11 chr2 217307489 217307772 -35948811 - AluJb SINE Alu -30 282 1 338 102 0 0 chr2 217309463 217309512 -35947071 - Charlie8 DNA MER1_type -2295 122 74 350 279 82 16 chr2 217309544 217309666 -35946917 - MIR SINE MIR -9 253 124 2248 80 0 3 chr2 217309757 217310046 -35946537 + AluSc SINE Alu 1 288 -21 2222 107 0 0 chr2 217311214 217311504 -35945079 + AluSx SINE Alu 1 290 -22 189 0 0 0 chr2 217311507 217311528 -35945055 + (GA)n Simple_repeat Simple_repeat 2 22 0 1273 51 23 0 chr2 217311530 217311706 -35944877 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 200 121 30 0 chr2 217311706 217311739 -35944844 + A-rich Low_complexity Low_complexity 5 38 0 401 268 86 77 chr2 217311940 217312160 -35944423 + MER102b DNA MER1_type 109 330 -11 197 387 9 19 chr2 217312451 217312557 -35944026 + MIR3 SINE MIR 11 115 -93 2333 114 0 0 chr2 217312864 217313172 -35943411 - AluSx SINE Alu -4 308 1 25 31 0 0 chr2 217313228 217313260 -35943323 + AT_rich Low_complexity Low_complexity 1 32 0 1123 231 64 55 chr2 217313293 217313753 -35942830 + MER39 LTR ERV1 50 707 0 240 116 23 23 chr2 217314377 217314420 -35942163 - MER34B LTR ERV1 0 565 523 724 213 109 11 chr2 217314440 217314623 -35941960 + MER20 DNA MER1_type 11 211 -8 676 265 117 18 chr2 217316331 217316554 -35940029 - MIR SINE MIR 0 262 18 275 272 80 73 chr2 217317138 217317573 -35939010 + MLT1J LTR MaLR 36 506 -5 252 0 0 0 chr2 217319250 217319278 -35937305 + (A)n Simple_repeat Simple_repeat 1 28 0 236 340 10 0 chr2 217319451 217319551 -35937032 - MIR SINE MIR -1 261 161 26 64 0 0 chr2 217319767 217319814 -35936769 + AT_rich Low_complexity Low_complexity 1 47 0 1888 139 58 0 chr2 217320338 217320633 -35935950 + AluSx SINE Alu 1 312 0 383 201 140 46 chr2 217321429 217321484 -35935099 - L1ME3A LINE L1 -207 5963 5915 2130 131 0 20 chr2 217321484 217321812 -35934771 + AluSx SINE Alu 1 312 0 383 201 140 46 chr2 217321812 217321944 -35934639 - L1ME3A LINE L1 -255 5915 5762 230 293 28 66 chr2 217322034 217322246 -35934337 - L1ME3A LINE L1 -531 5639 5436 2738 42 0 0 chr2 217322281 217322591 -35933992 - AluY SINE Alu 0 311 2 2465 150 76 32 chr2 217322622 217323123 -35933460 + Charlie1b DNA MER1_type 1 523 0 223 344 56 33 chr2 217323169 217323349 -35933234 - MIR SINE MIR -6 256 73 554 247 75 14 chr2 217323842 217323988 -35932595 - MIR SINE MIR 0 262 108 326 151 0 0 chr2 217324080 217324133 -35932450 - MLT1D LTR MaLR 0 505 453 2219 162 22 96 chr2 217324167 217324418 -35932165 - MLT1D LTR MaLR -35 470 273 1739 148 27 20 chr2 217324418 217324715 -35931868 - AluJb SINE Alu -13 299 1 2219 162 22 96 chr2 217324715 217324963 -35931620 - MLT1D LTR MaLR -232 273 8 266 270 79 0 chr2 217324982 217325045 -35931538 - L2 LINE L2 -17 3255 3188 * 280 267 103 35 chr2 217325025 217325141 -35931442 - L2 LINE L2 -235 3037 2914 244 243 188 42 chr2 217325190 217325334 -35931249 - MER5B DNA MER1_type -13 165 1 1873 124 44 4 chr2 217325370 217325643 -35930940 + AluSx SINE Alu 1 284 -28 250 326 187 5 chr2 217325661 217325848 -35930735 - L2 LINE L2 -472 2842 2622 346 250 257 14 chr2 217326060 217326200 -35930383 + MIR SINE MIR 8 181 -81 235 187 53 27 chr2 217327005 217327080 -35929503 - L1MA10 LINE L1 -2 6332 6256 1551 176 34 24 chr2 217327306 217327601 -35928982 + AluJo SINE Alu 6 303 -9 26 64 0 0 chr2 217327658 217327705 -35928878 + AT_rich Low_complexity Low_complexity 1 47 0 855 293 32 12 chr2 217327736 217327982 -35928601 - MIR SINE MIR -10 252 2 240 271 17 0 chr2 217328824 217328883 -35927700 + GA-rich Low_complexity Low_complexity 3 62 0 309 254 133 28 chr2 217329189 217329370 -35927213 - MIR SINE MIR -1 261 62 727 253 54 27 chr2 217329442 217329663 -35926920 - MIR SINE MIR -35 227 1 2007 112 3 21 chr2 217330364 217330649 -35925934 + AluSx SINE Alu 16 295 -17 591 265 78 49 chr2 217331050 217331537 -35925046 - L1M4 LINE L1 -2911 3235 2735 240 263 13 0 chr2 217331752 217331828 -35924755 - L1M4 LINE L1 -3155 2991 2915 306 231 11 55 chr2 217332036 217332127 -35924456 + L2 LINE L2 3186 3272 0 2028 120 0 17 chr2 217332296 217332596 -35923987 - AluSx SINE Alu -16 296 2 2365 93 13 0 chr2 217332605 217332906 -35923677 - AluSx SINE Alu -7 305 1 1928 195 106 34 chr2 217332940 217333411 -35923172 - MLT1D LTR MaLR 0 505 1 891 65 0 0 chr2 217334101 217334209 -35922374 - AluSp/q SINE Alu -10 303 196 1835 179 3 3 chr2 217334898 217335205 -35921378 - AluJb SINE Alu -5 307 1 399 346 31 35 chr2 217335475 217335729 -35920854 + LTR16C LTR ERVL 237 489 -2 1720 153 60 23 chr2 217335740 217336041 -35920542 + AluJo SINE Alu 1 312 0 237 233 33 78 chr2 217336042 217336132 -35920451 + MLT1L LTR MaLR 332 417 -198 462 176 44 11 chr2 217336169 217336260 -35920323 + MLT1L LTR MaLR 508 601 -14 2247 103 0 13 chr2 217336261 217336563 -35920020 - AluSp SINE Alu -15 298 1 284 257 27 0 chr2 217336768 217336842 -35919741 + MLT1K LTR MaLR 510 585 -3 198 0 0 0 chr2 217336859 217336881 -35919702 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 364 153 111 0 chr2 217337112 217337184 -35919399 + MLT1E LTR MaLR 506 585 -8 613 243 97 39 chr2 217337976 217338131 -35918452 - MIR SINE MIR -25 237 66 1647 205 33 46 chr2 217338131 217338526 -35918057 - MLT1B LTR MaLR 0 390 1 613 243 97 39 chr2 217338526 217338576 -35918007 - MIR SINE MIR -196 66 20 889 228 185 16 chr2 217338932 217339235 -35917348 + LTR33A LTR ERVL 160 513 -10 1529 71 142 25 chr2 217339579 217339819 -35916764 + L1PA12 LINE L1 5901 6168 0 192 77 0 0 chr2 217340422 217340448 -35916135 + (GAAA)n Simple_repeat Simple_repeat 2 27 0 1219 283 83 27 chr2 217341866 217342386 -35914197 + MLT1H LTR MaLR 1 549 0 237 114 0 0 chr2 217342481 217342516 -35914067 + Alu SINE Alu 2 36 -266 477 229 55 18 chr2 217342520 217342629 -35913954 + MLT1G1 LTR MaLR 483 595 0 2094 103 9 41 chr2 217342722 217343041 -35913542 + AluSq SINE Alu 2 310 -3 934 242 92 90 chr2 217343100 217343133 -35913450 + MLT1J LTR MaLR 6 37 -474 1524 153 44 72 chr2 217343133 217343454 -35913129 - AluJo SINE Alu 0 312 1 934 242 92 90 chr2 217343454 217343471 -35913112 + MLT1J LTR MaLR 37 52 -459 891 202 75 0 chr2 217343471 217343644 -35912939 + MER5A DNA MER1_type 1 186 -3 934 242 92 90 chr2 217343644 217344068 -35912515 + MLT1J LTR MaLR 52 482 -29 238 305 141 0 chr2 217344147 217344275 -35912308 + L2 LINE L2 3118 3263 -50 1077 128 21 5 chr2 217344508 217344691 -35911892 + L1MC3 LINE L1 7389 7575 -206 1063 154 17 69 chr2 217344691 217344896 -35911687 + L1MC2 LINE L1 6114 6307 -37 2247 110 7 0 chr2 217344896 217345195 -35911388 + AluSx SINE Alu 1 301 -11 1063 154 17 69 chr2 217345195 217345222 -35911361 + L1MC2 LINE L1 6307 6334 -10 240 198 42 125 chr2 217345230 217345326 -35911257 - MIR SINE MIR -44 218 131 1885 181 33 33 chr2 217346150 217346515 -35910068 + MLT1A1 LTR MaLR 1 365 0 2415 77 0 0 chr2 217346605 217346902 -35909681 + AluY SINE Alu 1 297 -14 977 184 12 6 chr2 217346907 217347070 -35909513 + FAM SINE Alu 1 164 -11 1673 256 97 39 chr2 217347198 217348090 -35908493 - L2 LINE L2 -8 3305 2359 1103 219 104 55 chr2 217348091 217348544 -35908039 + HsTC2 DNA Tc2 1204 1854 -44 390 274 34 0 chr2 217348573 217348690 -35907893 - MIR SINE MIR 0 262 142 1362 122 34 65 chr2 217350155 217350368 -35906215 + L1MA9 LINE L1 6054 6259 -53 1962 148 0 23 chr2 217350368 217350678 -35905905 - AluJo SINE Alu -5 307 5 1362 122 34 65 chr2 217350678 217350726 -35905857 + L1MA9 LINE L1 6259 6307 -5 974 197 87 0 chr2 217352041 217352295 -35904288 - MER5C DNA MER1_type 0 324 49 241 182 18 18 chr2 217352323 217352378 -35904205 + (CA)n Simple_repeat Simple_repeat 1 55 0 371 243 72 15 chr2 217352913 217353094 -35903489 + MLT1I LTR MaLR 138 394 -15 323 165 224 0 chr2 217353120 217353205 -35903378 - HAL1 LINE L1 -767 1740 1637 602 206 16 0 chr2 217353207 217353333 -35903250 - HAL1 LINE L1 -915 1592 1465 1412 229 158 10 chr2 217353530 217354041 -35902542 - HAL1 LINE L1 -1 2506 1920 351 322 43 0 chr2 217354058 217354173 -35902410 - HAL1 LINE L1 -1605 902 783 322 296 0 9 chr2 217354183 217354291 -35902292 + Zaphod DNA AcHobo 3910 4016 -15 301 210 0 116 chr2 217354314 217354452 -35902131 - HAL1 LINE L1 -2275 232 111 1843 174 0 17 chr2 217354460 217354930 -35901653 - MLT1D LTR MaLR 0 505 6 2257 113 3 10 chr2 217354946 217355255 -35901328 - AluSx SINE Alu -5 307 1 2242 126 7 0 chr2 217355475 217355785 -35900798 + AluSx SINE Alu 1 312 0 219 250 0 0 chr2 217355846 217355898 -35900685 + A-rich Low_complexity Low_complexity 5 56 0 194 206 0 0 chr2 217356133 217356167 -35900416 - MIR SINE MIR -67 141 108 512 326 20 0 chr2 217356487 217356634 -35899949 - L2 LINE L2 -7 3265 3116 1014 222 28 28 chr2 217357037 217357285 -35899298 + MIR SINE MIR 2 249 -13 2218 103 3 7 chr2 217357286 217357587 -35898996 - AluSg SINE Alu -10 300 1 3327 251 124 20 chr2 217358056 217359513 -35897070 - L2 LINE L2 -3 3310 1698 1782 144 7 24 chr2 217359653 217359945 -35896638 + AluJo SINE Alu 1 287 -25 27 0 0 0 chr2 217359953 217359980 -35896603 + AT_rich Low_complexity Low_complexity 1 27 0 271 308 145 0 chr2 217360160 217360277 -35896306 - L2 LINE L2 0 3272 3139 241 226 32 16 chr2 217360360 217360422 -35896161 - L1M4 LINE L1 -411 5773 5711 399 260 50 0 chr2 217360617 217360717 -35895866 + L2 LINE L2 3208 3312 -1 800 208 0 7 chr2 217361070 217361219 -35895364 + FAM SINE Alu 19 166 -19 204 97 0 0 chr2 217361412 217361443 -35895140 + (TGAA)n Simple_repeat Simple_repeat 2 32 0 748 206 50 12 chr2 217361849 217362009 -35894574 - MIR SINE MIR -36 226 61 1308 201 80 22 chr2 217362032 217362356 -35894227 + MLT1A1 LTR MaLR 21 363 -2 346 294 18 73 chr2 217362415 217362524 -35894059 - L2 LINE L2 -4 3268 3166 1179 291 176 45 chr2 217362611 217363851 -35892732 - L2 LINE L2 -341 2973 1572 2399 78 0 7 chr2 217363986 217364295 -35892288 + AluSq SINE Alu 1 307 -6 369 289 118 45 chr2 217365652 217365898 -35890685 - L1M2 LINE L1 -5716 1133 870 36 62 0 0 chr2 217365918 217365982 -35890601 + GC_rich Low_complexity Low_complexity 1 64 0 1789 92 121 7 chr2 217367411 217367684 -35888899 + AluSg1 SINE Alu 1 304 -5 2259 90 7 0 chr2 217367730 217368019 -35888564 + AluSc SINE Alu 1 291 -18 1128 130 0 21 chr2 217368079 217368271 -35888312 - AluSq SINE Alu -3 310 123 476 235 22 123 chr2 217369151 217369330 -35887253 + MIR SINE MIR 14 174 -88 378 253 77 47 chr2 217369372 217369558 -35887025 + MIR SINE MIR 56 253 -9 1673 122 0 8 chr2 217369565 217369803 -35886780 - AluSg/x SINE Alu -5 305 70 21 0 0 0 chr2 217369844 217369865 -35886718 + AT_rich Low_complexity Low_complexity 1 21 0 319 306 89 38 chr2 217370151 217370386 -35886197 - L1MC4a LINE L1 -1802 6006 5760 1570 170 33 0 chr2 217371132 217371447 -35885136 - AluJo SINE Alu 0 327 4 2224 103 0 7 chr2 217371608 217371908 -35884675 + AluSq SINE Alu 1 298 -15 1959 154 0 0 chr2 217372045 217372337 -35884246 + AluSx SINE Alu 1 292 -20 1957 80 61 4 chr2 217372391 217372675 -35883908 - AluSc SINE Alu 0 299 1 1833 98 126 15 chr2 217373186 217373511 -35883072 - MER46B DNA MER2_type 0 236 1 1980 101 40 44 chr2 217374382 217374680 -35881903 - AluSx SINE Alu -15 297 1 356 213 0 0 chr2 217375404 217375465 -35881118 + Tigger3(Golem) DNA MER2_type 1 61 -2968 3847 121 88 75 chr2 217375489 217375696 -35880887 + Tigger3(Golem) DNA MER2_type 2150 2353 -676 1575 149 34 68 chr2 217375696 217376019 -35880564 + AluJb SINE Alu 1 312 0 3847 121 88 75 chr2 217376019 217376279 -35880304 + Tigger3(Golem) DNA MER2_type 2353 2608 -421 2202 107 3 0 chr2 217376279 217376570 -35880013 + AluSq SINE Alu 5 296 -17 3847 121 88 75 chr2 217376570 217376970 -35879613 + Tigger3(Golem) DNA MER2_type 2608 3029 0 3278 168 85 38 chr2 217377009 217378049 -35878534 - L1MB8 LINE L1 0 6178 5096 1138 205 69 30 chr2 217378305 217378637 -35877946 + MER2 DNA MER2_type 1 345 0 2043 101 22 11 chr2 217378936 217379241 -35877342 - AluSc SINE Alu 0 308 1 2020 89 52 0 chr2 217379245 217379542 -35877041 - AluY SINE Alu 0 311 1 4658 70 28 9 chr2 217379889 217380529 -35876054 - L1PA11 LINE L1 -2 6172 5521 2178 118 10 0 chr2 217380538 217380844 -35875739 - AluSx SINE Alu -3 309 1 2414 82 0 3 chr2 217381069 217381372 -35875211 - AluSp SINE Alu -11 302 1 464 146 79 0 chr2 217381668 217381757 -35874826 + L1MC1 LINE L1 6035 6130 -203 2138 127 6 13 chr2 217381782 217382096 -35874487 + AluSx SINE Alu 1 312 0 1902 128 20 24 chr2 217383268 217383566 -35873017 - AluSx SINE Alu -15 297 1 2127 114 4 0 chr2 217383806 217384087 -35872496 + AluSx SINE Alu 1 282 -30 216 220 0 20 chr2 217384533 217384583 -35872000 + (TATATG)n Simple_repeat Simple_repeat 1 49 0 718 137 0 0 chr2 217384934 217385036 -35871547 + AluY SINE Alu 5 106 -205 1936 111 43 4 chr2 217385053 217385333 -35871250 + AluSc SINE Alu 15 305 -4 22 0 0 0 chr2 217385671 217385693 -35870890 + AT_rich Low_complexity Low_complexity 1 22 0 360 218 190 35 chr2 217386181 217386323 -35870260 + L2 LINE L2 3095 3258 -55 2304 91 3 7 chr2 217387098 217387405 -35869178 + AluY SINE Alu 1 306 -5 2272 71 7 32 chr2 217387944 217388253 -35868330 - AluSx SINE Alu -11 301 1 2267 118 0 0 chr2 217388400 217388706 -35867877 - AluSx SINE Alu -6 306 1 22 35 0 0 chr2 217390068 217390097 -35866486 + AT_rich Low_complexity Low_complexity 1 29 0 788 181 6 56 chr2 217390261 217390421 -35866162 + FRAM SINE Alu 2 153 -13 2083 138 0 3 chr2 217392192 217392489 -35864094 + AluSx SINE Alu 1 296 -16 1918 106 88 3 chr2 217392738 217393021 -35863562 + AluY SINE Alu 1 307 -4 229 204 108 0 chr2 217393059 217393152 -35863431 + L1ME4a LINE L1 5988 6090 -31 289 250 74 28 chr2 217393198 217393306 -35863277 + L3 LINE CR1 1188 1300 -277 224 280 0 0 chr2 217393383 217393433 -35863150 - MER5A DNA MER1_type -136 53 4 292 327 72 95 chr2 217393557 217393981 -35862602 + L2 LINE L2 2256 2657 -657 2350 87 10 3 chr2 217393981 217394280 -35862303 - AluSq SINE Alu -12 301 1 292 327 72 95 chr2 217394280 217394592 -35861991 + L2 LINE L2 2657 2975 -339 224 330 80 0 chr2 217394791 217394879 -35861704 + L2 LINE L2 3168 3262 -10 187 277 0 46 chr2 217396581 217396646 -35859937 - L3b LINE CR1 0 1583 1522 711 300 158 49 chr2 217396708 217397222 -35859361 - L3 LINE CR1 -98 1479 910 299 348 43 0 chr2 217397529 217397621 -35858962 + MIR SINE MIR 20 115 -93 645 306 215 15 chr2 217398202 217398598 -35857985 - L2 LINE L2 0 3313 2839 829 250 109 36 chr2 217398604 217398999 -35857584 + Charlie7 DNA MER1_type 1875 2307 -305 2071 143 0 0 chr2 217398999 217399292 -35857291 + AluSx SINE Alu 1 293 -19 829 250 109 36 chr2 217399292 217399336 -35857247 + Charlie7 DNA MER1_type 2307 2346 -266 36 40 0 0 chr2 217399341 217399391 -35857192 + AT_rich Low_complexity Low_complexity 1 50 0 1717 137 61 24 chr2 217399581 217399874 -35856709 + AluJo SINE Alu 1 304 -8 1120 171 4 22 chr2 217400379 217400607 -35855976 - L1MC1 LINE L1 -13 6320 6097 628 242 62 36 chr2 217401969 217402163 -35854420 + MIR SINE MIR 63 261 -1 21 36 0 0 chr2 217402725 217402753 -35853830 + AT_rich Low_complexity Low_complexity 1 28 0 427 231 37 8 chr2 217403852 217403986 -35852597 + L1M4c LINE L1 1923 2060 -4324 1289 233 147 58 chr2 217404036 217404826 -35851757 - L1MC4a LINE L1 -1503 6305 5446 2218 80 20 10 chr2 217405099 217405400 -35851183 + AluSx SINE Alu 1 304 -8 572 135 0 34 chr2 217406565 217406654 -35849929 + AluJ/FLAM SINE Alu 1 86 -226 27 0 0 0 chr2 217406661 217406688 -35849895 + AT_rich Low_complexity Low_complexity 1 27 0 2216 101 3 0 chr2 217407284 217407581 -35849002 + AluSg SINE Alu 1 298 -12 331 230 111 44 chr2 217407817 217407952 -35848631 - L1M2 LINE L1 -477 5823 5680 1729 61 9 0 chr2 217407952 217408165 -35848418 + AluY SINE Alu 81 295 -16 1803 135 33 30 chr2 217408791 217409095 -35847488 + AluJo SINE Alu 1 305 -7 21 0 0 0 chr2 217409762 217409783 -35846800 + AT_rich Low_complexity Low_complexity 1 21 0 263 321 160 0 chr2 217410152 217410258 -35846325 - L2 LINE L2 -12 3301 3179 209 333 51 26 chr2 217411042 217411159 -35845424 + MIR3 SINE MIR 5 124 -84 607 165 0 0 chr2 217411320 217411437 -35845146 - FLAM_C SINE Alu 0 144 28 210 160 0 0 chr2 217411569 217411619 -35844964 + T-rich Low_complexity Low_complexity 1 50 0 25 65 0 0 chr2 217411718 217411764 -35844819 + AT_rich Low_complexity Low_complexity 1 46 0 28 48 0 0 chr2 217412073 217412115 -35844468 + AT_rich Low_complexity Low_complexity 1 42 0 301 215 108 46 chr2 217413833 217413963 -35842620 + MIR SINE MIR 88 225 -37 2087 133 10 0 chr2 217414130 217414423 -35842160 - AluSg SINE Alu -14 296 1 40 67 0 0 chr2 217414514 217414589 -35841994 + AT_rich Low_complexity Low_complexity 1 75 0 430 271 109 52 chr2 217415391 217415583 -35841000 - MIR SINE MIR -34 228 26 340 200 107 79 chr2 217416062 217416202 -35840381 - MLT1I LTR MaLR -26 383 240 24 85 0 0 chr2 217416606 217416665 -35839918 + AT_rich Low_complexity Low_complexity 1 59 0 2849 178 210 102 chr2 217416927 217417456 -35839127 - L1MD3 LINE L1 -4 8271 7801 571 170 0 11 chr2 217417456 217417550 -35839033 - MLT1F1 LTR MaLR -474 93 1 2849 178 210 102 chr2 217417550 217418039 -35838544 - L1MD3 LINE L1 -474 7801 7039 1237 144 16 0 chr2 217418039 217418255 -35838328 + AluSg/x SINE Alu 91 309 0 235 307 0 0 chr2 217418256 217418331 -35838252 + (TA)n Simple_repeat Simple_repeat 1 75 0 21 57 0 0 chr2 217418375 217418410 -35838173 + AT_rich Low_complexity Low_complexity 1 35 0 1371 150 0 0 chr2 217418417 217418617 -35837966 - MER2 DNA MER2_type -144 201 2 3306 232 116 28 chr2 217418624 217419743 -35836840 - L1MD3 LINE L1 -758 5668 5618 2071 112 10 17 chr2 217419743 217420039 -35836544 - AluSq SINE Alu -19 294 1 3306 232 116 28 chr2 217420039 217420325 -35836258 - L1MD3 LINE L1 -808 5618 5359 3612 198 95 39 chr2 217420353 217421460 -35835123 + L1MA5 LINE L1 1483 2704 -4505 * 3925 162 63 45 chr2 217421434 217422449 -35834134 + L1MA5 LINE L1 5706 6702 -660 2472 84 0 0 chr2 217422449 217422759 -35833824 + AluY SINE Alu 1 310 -1 3925 162 63 45 chr2 217422759 217423433 -35833150 + L1MA5 LINE L1 6702 7362 0 3286 216 76 22 chr2 217423440 217424419 -35832164 - L1MD3 LINE L1 -1053 5373 4343 2175 194 41 35 chr2 217424420 217424904 -35831679 - MLT1D LTR MaLR 0 505 19 2044 203 103 167 chr2 217424904 217425971 -35830612 - L1MD3 LINE L1 -2106 4320 3187 979 156 110 6 chr2 217425971 217426144 -35830439 - MER58A DNA MER1_type -6 218 28 2044 203 103 167 chr2 217426144 217426761 -35829822 - L1MD3 LINE L1 -3239 3187 2630 2191 120 0 19 chr2 217426761 217427070 -35829513 - AluSx SINE Alu -9 303 1 2044 203 103 167 chr2 217427070 217427215 -35829368 - L1MD3 LINE L1 -3796 2630 2477 721 236 92 43 chr2 217427252 217427506 -35829077 - L1MD3 LINE L1 -4478 1948 1708 1870 96 4 4 chr2 217427506 217427756 -35828827 + AluSc SINE Alu 44 293 -16 721 236 92 43 chr2 217427756 217427975 -35828608 - L1MD3 LINE L1 -4718 1708 1322 986 100 88 6 chr2 217427976 217428146 -35828437 + AluY SINE Alu 1 184 -127 25 0 0 0 chr2 217428917 217428942 -35827641 + GC_rich Low_complexity Low_complexity 1 25 0 2145 116 10 3 chr2 217430014 217430324 -35826259 + AluSx SINE Alu 1 312 0 2078 117 0 3 chr2 217431262 217431567 -35825016 + AluSg SINE Alu 1 304 0 841 213 10 0 chr2 217431666 217431863 -35824720 + AluSc SINE Alu 2 200 -109 1042 136 0 0 chr2 217432056 217432211 -35824372 + FRAM SINE Alu 1 40 0 1820 109 60 30 chr2 217432965 217433267 -35823316 - AluY SINE Alu 0 311 1 31 44 0 0 chr2 217433570 217433615 -35822968 + AT_rich Low_complexity Low_complexity 1 45 0 214 0 111 0 chr2 217433889 217433925 -35822658 + T-rich Low_complexity Low_complexity 1 40 0 1074 33 0 0 chr2 217433927 217434048 -35822535 - AluY SINE Alu -33 278 158 2236 92 7 26 chr2 217434096 217434399 -35822184 - AluSx SINE Alu -15 297 1 448 230 95 32 chr2 217434858 217434984 -35821599 + MIR SINE MIR 17 150 -112 697 280 173 21 chr2 217435098 217435480 -35821103 + MLT1K LTR MaLR 105 544 -44 2013 67 4 8 chr2 217435959 217436226 -35820357 + AluY SINE Alu 1 266 -45 448 237 59 38 chr2 217436346 217436532 -35820051 - Charlie1 DNA MER1_type 0 2761 2572 * 873 278 10 0 chr2 217436524 217436718 -35819865 - Charlie1 DNA MER1_type -2564 197 2 556 251 106 11 chr2 217436882 217437061 -35819522 + MIR SINE MIR 2 197 -65 1150 164 0 0 chr2 217437110 217437287 -35819296 + AluJo SINE Alu 120 296 -16 555 264 101 19 chr2 217437438 217437597 -35818986 + MLT1J2 LTR MaLR 279 450 0 462 297 39 0 chr2 217437599 217437754 -35818829 - L2 LINE L2 -233 3080 2920 306 0 0 0 chr2 217438400 217438434 -35818149 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 446 216 54 155 chr2 217438987 217439075 -35817508 + Charlie8 DNA MER1_type 29 124 -2293 1637 154 145 39 chr2 217439075 217439119 -35817464 - MSTD LTR MaLR 0 396 358 2228 98 0 14 chr2 217439119 217439416 -35817167 + AluSg SINE Alu 5 297 -13 1637 154 145 39 chr2 217439416 217439729 -35816854 - MSTD LTR MaLR -38 358 1 446 216 54 155 chr2 217439729 217439918 -35816665 + Charlie8 DNA MER1_type 124 278 -2139 208 266 25 13 chr2 217440890 217440969 -35815614 + T-rich Low_complexity Low_complexity 4 83 0 419 189 78 189 chr2 217441071 217441260 -35815323 - Charlie8 DNA MER1_type -2139 278 128 1673 156 148 23 chr2 217441260 217441573 -35815010 + MSTD LTR MaLR 1 364 -32 2234 122 0 0 chr2 217441573 217441869 -35814714 - AluSg SINE Alu -14 296 1 1673 156 148 23 chr2 217441869 217441907 -35814676 + MSTD LTR MaLR 364 396 0 419 189 78 189 chr2 217441907 217441998 -35814585 - Charlie8 DNA MER1_type -2289 128 29 306 0 0 0 chr2 217442554 217442588 -35813995 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 565 212 73 22 chr2 217443326 217443463 -35813120 + AluSg/x SINE Alu 155 298 -11 252 86 0 0 chr2 217444831 217444866 -35811717 + (TA)n Simple_repeat Simple_repeat 1 35 0 1904 97 0 0 chr2 217445591 217445829 -35810754 + AluSx SINE Alu 1 238 -74 2020 142 13 7 chr2 217445978 217446288 -35810295 - AluSx SINE Alu 0 312 1 1362 61 0 14 chr2 217446563 217446840 -35809743 + (G)n Simple_repeat Simple_repeat 1 274 0 488 194 0 21 chr2 217446889 217446982 -35809601 - MLT1F1 LTR MaLR -476 91 1 1886 207 86 23 chr2 217446993 217447471 -35809112 - L1MD3 LINE L1 -729 7266 6759 1397 139 14 0 chr2 217447471 217447686 -35808897 + AluSg/x SINE Alu 89 306 -4 194 173 0 39 chr2 217447687 217447739 -35808844 + (CATA)n Simple_repeat Simple_repeat 2 51 0 21 57 0 0 chr2 217447808 217447843 -35808740 + AT_rich Low_complexity Low_complexity 1 35 0 1371 150 0 0 chr2 217447850 217448050 -35808533 - MER2 DNA MER2_type -144 201 2 756 287 110 9 chr2 217448050 217448395 -35808188 - L1MC4a LINE L1 -1204 6604 6225 397 250 82 61 chr2 217448827 217449023 -35807560 - MIR SINE MIR -44 218 19 2020 153 24 32 chr2 217449062 217449192 -35807391 + MER44D DNA MER2_type 2 132 -2359 1559 124 4 35 chr2 217449192 217449449 -35807134 - AluSg SINE Alu -8 302 54 2020 153 24 32 chr2 217449449 217449659 -35806924 + MER44D DNA MER2_type 132 609 0 309 246 52 2 chr2 217449698 217449784 -35806799 - MER5B DNA MER1_type -87 102 1 319 346 129 24 chr2 217449827 217450237 -35806346 + L2 LINE L2 2241 2693 -621 189 228 0 0 chr2 217450340 217450419 -35806164 + C-rich Low_complexity Low_complexity 1 79 0 1756 99 121 7 chr2 217451810 217452083 -35804500 + AluSg1 SINE Alu 1 304 -5 1905 100 64 4 chr2 217452129 217452409 -35804174 + AluSc SINE Alu 1 297 -12 666 167 0 25 chr2 217452462 217452582 -35804001 - AluSg/x SINE Alu -20 292 176 2178 111 3 10 chr2 217452849 217453146 -35803437 - AluSq SINE Alu -18 295 1 2276 223 41 52 chr2 217453169 217453393 -35803190 - L1M4c LINE L1 -4313 2250 2025 2375 98 0 0 chr2 217453393 217453690 -35802893 - AluSq SINE Alu -16 297 1 2276 223 41 52 chr2 217453690 217454358 -35802225 - L1M4c LINE L1 -4538 2025 1238 1160 88 93 21 chr2 217454459 217454653 -35801930 - AluSq SINE Alu -105 208 1 24 67 0 0 chr2 217455883 217455928 -35800655 + AT_rich Low_complexity Low_complexity 1 45 0 2627 67 0 0 chr2 217455957 217456269 -35800314 + AluSq SINE Alu 1 312 -1 2258 81 10 10 chr2 217456417 217456714 -35799869 + AluSg1 SINE Alu 1 297 -12 524 46 0 0 chr2 217456836 217456901 -35799682 - MADE1 DNA Mariner -15 65 1 2377 70 7 7 chr2 217456918 217457217 -35799366 + AluY SINE Alu 1 299 -12 2335 100 0 0 chr2 217457703 217458002 -35798581 + AluSg SINE Alu 1 299 -11 192 97 0 0 chr2 217458013 217458044 -35798539 + (TCTCTG)n Simple_repeat Simple_repeat 1 31 0 292 289 90 2 chr2 217458303 217458527 -35798056 - LTR16A LTR ERVL -118 332 58 1779 127 25 25 chr2 217459113 217459428 -35797155 - AluSq SINE Alu 0 315 1 2306 53 0 33 chr2 217460044 217460344 -35796239 - AluSx SINE Alu -22 290 1 255 235 141 0 chr2 217460759 217460844 -35795739 + L1ME LINE L1 5701 5797 -324 354 230 257 5 chr2 217461058 217461244 -35795339 + L1M4 LINE L1 5198 5426 -744 1065 137 80 0 chr2 217461948 217461996 -35794587 - AluJo SINE Alu -123 189 146 237 65 0 0 chr2 217461996 217462027 -35794556 + (TG)n Simple_repeat Simple_repeat 2 32 0 1065 137 80 0 chr2 217462027 217462153 -35794430 - AluJo SINE Alu -166 146 1 1612 59 118 0 chr2 217462236 217462440 -35794143 - AluY SINE Alu -83 228 1 539 329 19 5 chr2 217462614 217462827 -35793756 + Charlie8 DNA MER1_type 46 261 -2156 2110 119 10 3 chr2 217463723 217464026 -35792557 - AluSx SINE Alu -7 305 1 1872 111 17 17 chr2 217464039 217464337 -35792246 - AluSp SINE Alu -15 298 1 716 175 21 62 chr2 217464974 217465168 -35791415 - L1MB8 LINE L1 0 6178 5993 1991 145 0 0 chr2 217465273 217465563 -35791020 - AluSx SINE Alu -18 294 5 2299 79 13 7 chr2 217465729 217466032 -35790551 + AluSp SINE Alu 1 305 -8 207 0 0 0 chr2 217466917 217466940 -35789643 + (TTAA)n Simple_repeat Simple_repeat 3 25 0 2325 74 3 0 chr2 217466940 217467223 -35789360 - AluSq SINE Alu -29 284 1 199 200 0 0 chr2 217467469 217467514 -35789069 + L2 LINE L2 3269 3313 0 1254 209 14 21 chr2 217467708 217467990 -35788593 + MLT1A1 LTR MaLR 2 281 -84 284 313 109 81 chr2 217468402 217468760 -35787823 + L2 LINE L2 2862 3229 -43 369 261 146 36 chr2 217468909 217469074 -35787509 + L2 LINE L2 1005 1187 -2127 2275 75 14 7 chr2 217469097 217469389 -35787194 - AluSq SINE Alu -19 294 1 182 204 56 37 chr2 217469416 217469470 -35787113 + L2 LINE L2 3176 3230 -83 538 90 0 51 chr2 217469755 217469833 -35786750 - AluJo SINE Alu -17 295 222 770 166 0 58 chr2 217469903 217470042 -35786541 + FLAM_C SINE Alu 1 131 -2 2363 85 13 3 chr2 217470227 217470533 -35786050 - AluSc SINE Alu 0 309 1 1152 144 87 10 chr2 217470551 217470759 -35785824 - AluJo SINE Alu -88 224 1 1252 202 98 7 chr2 217471420 217471697 -35784886 + AluJo SINE Alu 1 302 -10 415 277 72 64 chr2 217472110 217472359 -35784224 + HAL1 LINE L1 1390 1640 -867 2129 115 13 3 chr2 217472527 217472832 -35783751 + AluSg SINE Alu 1 308 -2 1196 169 12 132 chr2 217472832 217473158 -35783425 + MLT1A1 LTR MaLR 77 363 -2 2149 131 0 0 chr2 217473178 217473469 -35783114 - AluSx SINE Alu -21 291 1 690 164 10 0 chr2 217474430 217474534 -35782049 + FLAM_C SINE Alu 15 119 -24 2565 99 65 3 chr2 217474666 217475019 -35781564 + THE1C LTR MaLR 1 375 0 1818 179 34 0 chr2 217475045 217475370 -35781213 - MSTA LTR MaLR 0 428 93 236 65 0 0 chr2 217475370 217475401 -35781182 + Alu SINE Alu 1 31 -271 963 80 16 0 chr2 217475401 217475526 -35781057 + AluSq/x SINE Alu 13 139 -173 796 210 113 11 chr2 217475526 217475712 -35780871 + LTR51 LTR ERV1 448 652 -19 2069 114 0 0 chr2 217475731 217476004 -35780579 + AluSx SINE Alu 1 273 -39 351 0 0 0 chr2 217476014 217476053 -35780530 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 308 180 0 0 chr2 217476104 217476154 -35780429 - Alu SINE Alu -250 50 1 706 221 8 0 chr2 217476231 217476362 -35780221 + AluJo/FLAM SINE Alu 2 133 -169 943 52 22 30 chr2 217476364 217476499 -35780084 + AluSc SINE Alu 1 134 -175 25 0 0 0 chr2 217476615 217476640 -35779943 + AT_rich Low_complexity Low_complexity 1 25 0 2011 95 37 0 chr2 217477160 217477456 -35779127 - AluY SINE Alu -3 308 2 418 311 62 6 chr2 217477525 217477686 -35778897 + L1ME4a LINE L1 5456 5625 -496 235 232 0 0 chr2 217477741 217477797 -35778786 + L1ME4a LINE L1 5990 6045 -76 23 0 0 0 chr2 217477799 217477822 -35778761 + AT_rich Low_complexity Low_complexity 1 23 0 2192 123 0 0 chr2 217477883 217478191 -35778392 + AluSx SINE Alu 1 308 -4 1315 75 30 249 chr2 217478640 217479001 -35777582 + AluSq SINE Alu 1 282 -31 1059 106 0 0 chr2 217479003 217479145 -35777438 + AluSg/x SINE Alu 164 305 -7 286 275 0 0 chr2 217479158 217479227 -35777356 + MIR3 SINE MIR 137 205 -3 2234 113 3 0 chr2 217479273 217479566 -35777017 + AluSq SINE Alu 1 294 -19 263 324 63 14 chr2 217479662 217479804 -35776779 + MIR SINE MIR 108 256 -6 1802 100 8 35 chr2 217480295 217480556 -35776027 - AluSq SINE Alu -54 259 6 280 242 84 11 chr2 217480559 217480654 -35775929 - MIR SINE MIR -80 182 81 23 0 0 0 chr2 217480699 217480722 -35775861 + AT_rich Low_complexity Low_complexity 1 23 0 4994 139 38 28 chr2 217480750 217481525 -35775058 - L1MB2 LINE L1 -2 6169 5382 2290 103 7 0 chr2 217481525 217481826 -35774757 - AluSg SINE Alu -7 303 1 4994 139 38 28 chr2 217481826 217481951 -35774632 - L1MB2 LINE L1 -789 5382 5260 746 179 90 7 chr2 217481951 217482096 -35774487 - AluJb SINE Alu -10 302 146 1595 161 0 31 chr2 217482103 217482389 -35774194 - AluJb SINE Alu -23 289 13 1727 214 44 0 chr2 217482393 217482758 -35773825 - L1MB2 LINE L1 -871 5275 4895 2025 133 3 3 chr2 217482964 217483265 -35773318 - AluSx SINE Alu -11 301 1 538 262 8 0 chr2 217485206 217485328 -35771255 - FLAM_C SINE Alu -10 133 11 2330 180 42 17 chr2 217485340 217485732 -35770851 - L1MC/D LINE L1 -658 5675 5264 2149 112 7 0 chr2 217485732 217486019 -35770564 + AluSx SINE Alu 6 294 -18 2330 180 42 17 chr2 217486019 217486255 -35770328 - L1MC/D LINE L1 -1069 5264 5035 2185 79 7 26 chr2 217486255 217486558 -35770025 - AluY SINE Alu -12 299 3 1142 59 7 0 chr2 217486560 217486696 -35769887 - AluSp SINE Alu -176 137 1 212 262 0 71 chr2 217486745 217486829 -35769754 + L2 LINE L2 3194 3271 -1 2192 127 3 0 chr2 217487867 217488174 -35768409 + AluSp SINE Alu 1 308 -5 1641 135 0 0 chr2 217488268 217488505 -35768078 + AluSg/x SINE Alu 65 301 -9 6791 186 54 36 chr2 217488506 217489274 -35767309 - L1MB8 LINE L1 -9 6169 5416 2117 116 20 0 chr2 217489274 217489576 -35767007 + AluSg SINE Alu 1 308 -2 6791 186 54 36 chr2 217489576 217490098 -35766485 - L1MB8 LINE L1 -762 5416 4905 2584 158 52 2 chr2 217490098 217490504 -35766079 - MSTB LTR MaLR 0 426 1 6791 186 54 36 chr2 217490504 217491576 -35765007 - L1MB8 LINE L1 -1273 4905 3784 493 261 27 82 chr2 217541667 217541756 -35714827 - L1ME LINE L1 -375 5789 5714 2201 100 0 25 chr2 217541756 217542076 -35714507 + AluSx SINE Alu 1 312 0 493 261 27 82 chr2 217542076 217542170 -35714413 - L1ME LINE L1 -450 5714 5616 262 336 82 14 chr2 217542290 217542436 -35714147 + MIR3 SINE MIR 15 170 -38 1124 138 0 0 chr2 217542795 217542955 -35713628 - AluSx SINE Alu -151 161 2 478 180 22 0 chr2 217542958 217543047 -35713536 + L1ME2 LINE L1 6040 6130 -34 2086 93 4 0 chr2 217543163 217543443 -35713140 - AluSp SINE Alu -32 281 1 1289 135 5 0 chr2 217543835 217544042 -35712541 - AluSg/x SINE Alu -7 303 96 2177 94 0 0 chr2 217544626 217544914 -35711669 + AluSq SINE Alu 3 290 -23 2050 92 35 41 chr2 217545051 217545219 -35711364 - AluSx SINE Alu 0 312 145 2296 87 3 3 chr2 217545219 217545530 -35711053 - AluSp SINE Alu -2 311 1 2050 92 35 41 chr2 217545530 217545675 -35710908 - AluSx SINE Alu -167 145 1 243 218 131 73 chr2 217547292 217547498 -35709085 - L1MC5 LINE L1 -143 7818 7601 2077 95 0 0 chr2 217547536 217547810 -35708773 + AluSx SINE Alu 11 284 -28 477 0 0 0 chr2 217547810 217547863 -35708720 + (CATA)n Simple_repeat Simple_repeat 4 56 0 2214 94 3 0 chr2 217548344 217548641 -35707942 + AluSg SINE Alu 1 298 -12 262 292 112 11 chr2 217548641 217548730 -35707853 + MIR SINE MIR 24 121 -87 383 206 157 0 chr2 217548933 217549035 -35707548 + L2 LINE L2 3195 3312 -1 755 124 0 0 chr2 217549870 217549983 -35706600 + AluSp/q SINE Alu 199 311 -2 2263 83 0 3 chr2 217549993 217550293 -35706290 + AluY SINE Alu 1 299 -12 767 186 0 0 chr2 217550730 217550854 -35705729 + AluJb SINE Alu 2 125 -187 186 43 0 0 chr2 217551580 217551603 -35704980 + (TCC)n Simple_repeat Simple_repeat 2 24 0 198 91 0 0 chr2 217551834 217551867 -35704716 + (A)n Simple_repeat Simple_repeat 1 33 0 201 237 0 0 chr2 217551924 217551983 -35704600 + GA-rich Low_complexity Low_complexity 122 180 0 1989 107 0 53 chr2 217553105 217553424 -35703159 + AluSx SINE Alu 1 302 -10 1281 80 0 0 chr2 217553538 217553701 -35702882 - AluSp SINE Alu -21 292 130 211 330 78 19 chr2 217553776 217553879 -35702704 + MIR SINE MIR 33 141 -67 293 357 111 8 chr2 217554635 217554870 -35701713 + L2 LINE L2 2594 2852 -462 552 195 9 18 chr2 217554908 217555021 -35701562 + MER45A DNA AcHobo 67 178 0 2054 77 46 11 chr2 217555060 217555345 -35701238 - AluSc SINE Alu -14 295 1 2376 82 0 3 chr2 217555423 217555729 -35700854 - AluSc SINE Alu -4 305 1 1043 207 10 0 chr2 217556168 217556366 -35700217 + MER3 DNA MER1_type 2 201 -8 2706 142 63 26 chr2 217556680 217556892 -35699691 + MER41E LTR ERV1 1 204 -308 1822 152 3 3 chr2 217556892 217557189 -35699394 + AluSx SINE Alu 1 297 -15 2706 142 63 26 chr2 217557189 217557470 -35699113 + MER41E LTR ERV1 204 512 0 2292 86 3 0 chr2 217557551 217557852 -35698731 - AluSq SINE Alu -10 303 2 1217 99 0 0 chr2 217557980 217558142 -35698441 - AluSx SINE Alu -148 164 3 458 294 16 8 chr2 217558629 217558755 -35697828 - MER5B DNA MER1_type -1 177 51 1854 103 0 11 chr2 217559848 217560119 -35696464 - AluSx SINE Alu -3 309 42 786 151 0 8 chr2 217560709 217560835 -35695748 - FLAM_C SINE Alu -14 129 5 632 190 99 0 chr2 217560950 217561071 -35695512 - FLAM_A SINE Alu 0 133 1 2140 111 3 3 chr2 217562264 217562562 -35694021 - AluSx SINE Alu -14 298 1 864 124 0 7 chr2 217562562 217562699 -35693884 - AluSq/x SINE Alu -176 136 1 204 167 24 0 chr2 217566037 217566079 -35690504 + (TA)n Simple_repeat Simple_repeat 2 44 0 200 217 0 0 chr2 217567119 217567165 -35689418 + (TA)n Simple_repeat Simple_repeat 1 46 0 1985 127 0 10 chr2 217568230 217568529 -35688054 - AluSx SINE Alu -8 304 9 361 277 32 85 chr2 217569163 217569182 -35687401 + MIR SINE MIR 71 89 -173 901 181 55 169 chr2 217569182 217569292 -35687291 + MLT1B LTR MaLR 1 122 -268 2129 82 28 3 chr2 217569292 217569583 -35687000 + AluSq SINE Alu 1 298 -15 901 181 55 169 chr2 217569583 217569909 -35686674 + MLT1B LTR MaLR 122 387 -3 361 277 32 85 chr2 217569909 217570077 -35686506 + MIR SINE MIR 89 248 -14 458 257 41 18 chr2 217570169 217570340 -35686243 - MIR3 SINE MIR -33 175 1 448 284 63 37 chr2 217570375 217570565 -35686018 + MIR SINE MIR 6 200 -62 2067 79 7 7 chr2 217571470 217571750 -35684833 + AluSx SINE Alu 1 280 -32 2178 115 0 0 chr2 217571790 217572094 -35684489 + AluSx SINE Alu 1 304 -8 1206 150 24 28 chr2 217572508 217572721 -35683862 - MER20 DNA MER1_type -7 212 1 341 127 55 0 chr2 217572936 217572991 -35683592 + MADE1 DNA Mariner 23 80 0 2255 93 3 6 chr2 217573079 217573390 -35683193 - AluSp SINE Alu -3 310 1 2261 75 24 0 chr2 217573392 217573685 -35682898 - AluSp SINE Alu -13 300 1 2198 86 7 13 chr2 217573901 217574203 -35682380 - AluSq SINE Alu -13 300 1 359 302 101 27 chr2 217574283 217574432 -35682151 + MIR3 SINE MIR 37 196 -12 22 35 0 0 chr2 217574715 217574744 -35681839 + AT_rich Low_complexity Low_complexity 1 29 0 1023 90 28 0 chr2 217575153 217575297 -35681286 + AluSg/x SINE Alu 150 297 -13 1871 121 4 0 chr2 217576304 217576577 -35680006 + AluSx SINE Alu 26 299 -13 644 109 0 0 chr2 217576619 217576711 -35679872 - AluY SINE Alu -218 93 2 1355 103 0 5 chr2 217576722 217576916 -35679667 - AluSg/x SINE Alu -3 309 117 1387 109 0 14 chr2 217577052 217577263 -35679320 + AluSg/x SINE Alu 102 309 -3 2124 109 3 10 chr2 217577459 217577771 -35678812 + AluSq SINE Alu 1 310 -3 312 172 62 0 chr2 217577786 217577850 -35678733 + Charlie5 DNA MER1_type 2550 2617 0 1025 166 28 38 chr2 217577865 217577978 -35678605 + MER58A DNA MER1_type 1 113 -2307 1348 208 126 44 chr2 217577978 217578383 -35678200 + MER31B LTR ERV1 3 446 -20 1670 182 3 0 chr2 217578383 217578680 -35677903 + AluJb SINE Alu 1 298 -14 1348 208 126 44 chr2 217578680 217578703 -35677880 + MER31B LTR ERV1 446 466 0 1025 166 28 38 chr2 217578703 217578800 -35677783 + MER58A DNA MER1_type 113 209 -15 186 261 0 22 chr2 217579077 217579123 -35677460 - MIR SINE MIR -2 260 216 254 286 12 0 chr2 217579265 217579349 -35677234 - L1ME4a LINE L1 -202 5919 5835 261 0 0 0 chr2 217579406 217579435 -35677148 + (TTTAA)n Simple_repeat Simple_repeat 5 33 0 361 166 0 2 chr2 217579446 217579513 -35677070 - MIR SINE MIR -51 157 91 1004 149 0 18 chr2 217579532 217579700 -35676883 - AluSg/x SINE Alu -17 293 129 2117 97 7 0 chr2 217580195 217580483 -35676100 - AluSg SINE Alu -20 290 1 191 311 80 58 chr2 217581033 217581258 -35675325 + L2 LINE L2 2711 2940 -374 305 250 0 0 chr2 217581330 217581390 -35675193 + MIR SINE MIR 85 144 -64 675 191 0 0 chr2 217581400 217581547 -35675036 + (TG)n Simple_repeat Simple_repeat 2 148 0 1237 163 104 8 chr2 217581547 217581787 -35674796 - AluJo SINE Alu -49 263 1 193 311 108 0 chr2 217581867 217581941 -35674642 + L2 LINE L2 3191 3272 0 898 158 0 0 chr2 217582361 217582507 -35674076 - AluJb SINE Alu -11 301 156 268 243 144 36 chr2 217582665 217582776 -35673807 - MIR3 SINE MIR -85 123 1 1065 263 109 53 chr2 217582860 217583347 -35673236 - MLT1H LTR MaLR -11 538 25 291 250 42 14 chr2 217584465 217584537 -35672046 + MIR3 SINE MIR 109 182 -26 829 229 26 5 chr2 217584717 217584909 -35671674 + MIR SINE MIR 64 259 -3 609 170 0 0 chr2 217585036 217585142 -35671441 - L1PA16 LINE L1 -21 6145 6040 1035 154 0 0 chr2 217585142 217585304 -35671279 + AluSg/x SINE Alu 126 287 -23 673 103 0 0 chr2 217585309 217585396 -35671187 - AluS SINE Alu -225 88 2 1334 186 20 4 chr2 217585961 217586208 -35670375 - MLT1G LTR MaLR -2 588 338 1343 124 0 14 chr2 217586208 217586417 -35670166 + AluJb SINE Alu 107 312 0 2350 66 23 0 chr2 217586433 217586736 -35669847 + AluY SINE Alu 1 310 -1 836 126 46 13 chr2 217587152 217587303 -35669280 + BC200 scRNA scRNA 1 156 -44 710 187 24 8 chr2 217587602 217587725 -35668858 + FLAM_A SINE Alu 1 125 -8 258 105 35 53 chr2 217587725 217587777 -35668806 + MLT1J LTR MaLR 106 156 -355 1930 152 3 0 chr2 217588115 217588424 -35668159 + AluJb SINE Alu 1 310 -2 243 246 73 55 chr2 217588532 217588642 -35667941 + L2 LINE L2 3156 3267 -5 437 271 115 41 chr2 217588958 217589053 -35667530 + MIR SINE MIR 13 100 -162 1662 128 13 61 chr2 217589053 217589365 -35667218 - AluJo SINE Alu -15 297 1 437 271 115 41 chr2 217589365 217589487 -35667096 + MIR SINE MIR 100 246 -16 222 257 171 0 chr2 217589799 217589904 -35666679 - MER5A DNA MER1_type -50 139 17 * 330 221 81 23 chr2 217589820 217589906 -35666677 + MER5B DNA MER1_type 88 178 0 753 276 43 9 chr2 217590475 217590685 -35665898 - MIR SINE MIR 0 262 46 1969 124 3 7 chr2 217590973 217591272 -35665311 - AluSx SINE Alu -14 298 1 212 294 0 0 chr2 217591515 217591566 -35665017 + (TGGA)n Simple_repeat Simple_repeat 2 52 0 1683 167 13 20 chr2 217591621 217591927 -35664656 + AluJo SINE Alu 1 304 -8 1251 117 9 22 chr2 217591987 217592209 -35664374 - L1MA8 LINE L1 0 6291 6073 793 172 0 15 chr2 217592436 217592570 -35664013 - FLAM_C SINE Alu 0 133 2 4653 89 3 17 chr2 217592704 217592816 -35663767 - MER41B LTR ERV1 -2 633 521 1712 143 16 22 chr2 217592816 217593130 -35663453 + AluSx SINE Alu 1 312 0 4653 89 3 17 chr2 217593130 217593659 -35662924 - MER41B LTR ERV1 -114 521 1 831 114 0 16 chr2 217594033 217594156 -35662427 - FLAM_C SINE Alu -12 121 1 204 182 0 0 chr2 217594966 217594999 -35661584 + MIR SINE MIR 43 75 -187 301 215 172 92 chr2 217595079 217595187 -35661396 + MIR SINE MIR 76 203 -59 2150 68 24 0 chr2 217595187 217595481 -35661102 + AluSg SINE Alu 1 301 -9 301 215 172 92 chr2 217595481 217595535 -35661048 + MIR SINE MIR 203 251 -11 21 36 0 0 chr2 217596219 217596247 -35660336 + GC_rich Low_complexity Low_complexity 1 28 0 2045 105 17 0 chr2 217597055 217597350 -35659233 - AluSx SINE Alu -12 300 1 231 280 180 10 chr2 217598340 217598440 -35658143 - L2 LINE L2 -4 3309 3193 347 265 157 54 chr2 217598529 217598733 -35657850 - MIR SINE MIR -10 252 28 235 298 95 0 chr2 217599110 217599194 -35657389 - MIR SINE MIR -84 124 33 252 0 0 0 chr2 217599360 217599388 -35657195 + (TA)n Simple_repeat Simple_repeat 2 29 0 494 294 61 68 chr2 217599388 217599698 -35656885 - L1M4 LINE L1 -1077 5069 4762 2267 70 10 0 chr2 217599814 217600113 -35656470 - AluY SINE Alu -9 302 1 21 57 0 0 chr2 217600347 217600382 -35656201 + AT_rich Low_complexity Low_complexity 1 35 0 1488 174 4 15 chr2 217600829 217601099 -35655484 - AluJb SINE Alu -15 297 31 243 229 0 43 chr2 217601402 217601472 -35655111 - L1P3 LINE L1 -5104 771 705 1607 178 24 0 chr2 217601687 217601974 -35654609 + AluJb SINE Alu 1 294 -18 2268 85 0 3 chr2 217602237 217602542 -35654041 - AluSx SINE Alu -8 304 1 22 35 0 0 chr2 217602578 217602607 -35653976 + AT_rich Low_complexity Low_complexity 1 29 0 848 134 5 157 chr2 217604037 217604127 -35652456 + MER5A DNA MER1_type 3 44 -145 1476 167 30 7 chr2 217604127 217604417 -35652166 + AluJb SINE Alu 7 302 0 848 134 5 157 chr2 217604417 217604542 -35652041 + MER5A DNA MER1_type 44 186 -3 21 57 0 0 chr2 217604580 217604615 -35651968 + AT_rich Low_complexity Low_complexity 1 35 0 780 125 33 0 chr2 217604660 217604780 -35651803 - AluJo/FRAM SINE Alu -13 299 176 1184 73 0 24 chr2 217604780 217604945 -35651638 + AluSg/x SINE Alu 132 292 -20 31 0 0 0 chr2 217606026 217606057 -35650526 + GC_rich Low_complexity Low_complexity 1 31 0 239 238 150 12 chr2 217606995 217607075 -35649508 - MIR SINE MIR -3 259 169 2212 85 13 0 chr2 217607076 217607383 -35649200 + AluY SINE Alu 1 311 0 244 229 29 86 chr2 217607483 217607553 -35649030 + MIR SINE MIR 79 144 -118 183 42 0 0 chr2 217607557 217607581 -35649002 + (T)n Simple_repeat Simple_repeat 1 24 0 2056 113 0 0 chr2 217607603 217607895 -35648688 + AluSx SINE Alu 5 296 -16 1148 122 0 0 chr2 217608118 217608282 -35648301 + AluSc SINE Alu 137 300 -9 345 269 117 30 chr2 217608285 217608482 -35648101 + HAL1 LINE L1 1383 1596 -911 1863 176 0 0 chr2 217608501 217608813 -35647770 + AluJb SINE Alu 1 312 0 2313 93 6 0 chr2 217608815 217609126 -35647457 + AluSq SINE Alu 1 313 0 193 253 110 11 chr2 217609315 217609406 -35647177 - MIR SINE MIR -11 251 152 2736 0 0 3 chr2 217609477 217609782 -35646801 + AluYa5 SINE Alu 1 304 -7 815 226 25 30 chr2 217610242 217610477 -35646106 - MER96B DNA MER1_type? -180 237 4 292 347 40 7 chr2 217610657 217610807 -35645776 - MIR SINE MIR -100 162 8 1049 159 0 0 chr2 217611156 217611326 -35645257 - AluSg/x SINE Alu -8 302 133 2200 104 3 0 chr2 217611327 217611624 -35644959 - AluSx SINE Alu -14 298 1 1482 149 4 8 chr2 217611915 217612163 -35644420 + AluJo SINE Alu 1 247 -65 2080 113 3 0 chr2 217612450 217612743 -35643840 - AluSq SINE Alu -19 294 1 2029 121 3 0 chr2 217613141 217613423 -35643160 + AluSx SINE Alu 1 283 -29 207 0 0 0 chr2 217613423 217613446 -35643137 + (TTAA)n Simple_repeat Simple_repeat 3 25 0 27 29 0 0 chr2 217614065 217614099 -35642484 + AT_rich Low_complexity Low_complexity 1 34 0 2261 107 0 0 chr2 217614350 217614660 -35641923 - AluSx SINE Alu -2 310 1 789 158 0 43 chr2 217616738 217616877 -35639706 + FLAM_A SINE Alu 1 133 0 2202 112 0 0 chr2 217617839 217618151 -35638432 + AluSx SINE Alu 1 312 0 1350 119 0 0 chr2 217617958 217618153 -35638430 + AluSg/x SINE Alu 118 338 0 214 39 0 0 chr2 217618153 217618179 -35638404 + (GAAAA)n Simple_repeat Simple_repeat 5 180 0 2190 110 0 0 chr2 217619088 217619392 -35637191 + AluSg SINE Alu 1 304 0 2423 99 0 0 chr2 217619490 217619793 -35636790 + AluSc SINE Alu 1 303 -6 186 133 0 0 chr2 217619805 217619835 -35636748 + (CTATA)n Simple_repeat Simple_repeat 2 31 0 1550 108 19 5 chr2 217619936 217620148 -35636435 + AluSg/x SINE Alu 78 292 -18 2155 92 20 20 chr2 217620184 217620479 -35636104 + AluSc SINE Alu 1 295 -14 1113 159 0 0 chr2 217620480 217620650 -35635933 + AluSg/x SINE Alu 133 302 -8 245 230 203 0 chr2 217621130 217621204 -35635379 + MLT1G LTR MaLR 223 311 -244 484 243 56 15 chr2 217621276 217621472 -35635111 + MLT1G LTR MaLR 344 538 -34 191 206 59 44 chr2 217623946 217624014 -35632569 + MER5B DNA MER1_type 1 69 -109 230 316 43 58 chr2 217624226 217624365 -35632218 - L2 LINE L2 0 3272 3136 729 265 138 25 chr2 217624379 217624479 -35632104 - MLT1J LTR MaLR -196 315 228 2132 115 13 22 chr2 217624479 217624618 -35631965 + AluSx SINE Alu 1 140 -172 2049 118 0 33 chr2 217624618 217624924 -35631659 + AluSg SINE Alu 1 296 -14 2132 115 13 22 chr2 217624924 217625098 -35631485 + AluSx SINE Alu 140 311 -1 729 265 138 25 chr2 217625098 217625280 -35631303 - MLT1J LTR MaLR -283 228 1 2355 107 0 7 chr2 217625331 217625639 -35630944 + AluSg SINE Alu 1 306 -4 2336 100 0 0 chr2 217625897 217626197 -35630386 + AluSx SINE Alu 1 300 -12 766 150 14 7 chr2 217626377 217626517 -35630066 - L1PA15 LINE L1 0 6165 6025 807 104 0 0 chr2 217626517 217626623 -35629960 - U6 snRNA snRNA -1 106 1 2011 129 7 0 chr2 217626938 217627224 -35629359 - AluSx SINE Alu -24 288 1 2312 98 3 0 chr2 217627231 217627528 -35629055 - AluSx SINE Alu -14 298 1 2366 75 17 0 chr2 217627541 217627834 -35628749 - AluSp SINE Alu -15 298 1 240 161 0 81 chr2 217627877 217627939 -35628644 + MER5B DNA MER1_type 13 69 -109 950 104 7 7 chr2 217628001 217628136 -35628447 + AluSg SINE Alu 1 135 -175 2349 75 14 3 chr2 217628236 217628531 -35628052 - AluSg SINE Alu -12 298 1 401 277 72 64 chr2 217628699 217628948 -35627635 - HAL1 LINE L1 -867 1640 1390 1282 205 93 7 chr2 217629360 217629638 -35626945 - AluJo SINE Alu -10 302 1 373 124 0 5 chr2 217630548 217630615 -35625968 + Alu SINE Alu 1 46 -256 192 97 0 0 chr2 217631140 217631171 -35625412 + (CAGAGA)n Simple_repeat Simple_repeat 1 31 0 2377 97 0 0 chr2 217631182 217631481 -35625102 - AluSg SINE Alu -11 299 1 2436 70 3 7 chr2 217631967 217632267 -35624316 - AluY SINE Alu -12 299 1 520 46 0 0 chr2 217632284 217632349 -35624234 + MADE1 DNA Mariner 1 65 -15 2433 84 3 0 chr2 217632471 217632768 -35623815 - AluSg SINE Alu -12 298 1 23 0 0 0 chr2 217634381 217634404 -35622179 + GC_rich Low_complexity Low_complexity 1 23 0 370 266 23 31 chr2 217635425 217635553 -35621030 + L1ME1 LINE L1 5929 6055 -111 2224 115 0 3 chr2 217635756 217636052 -35620531 + AluSx SINE Alu 1 295 -17 22 35 0 0 chr2 217636598 217636627 -35619956 + AT_rich Low_complexity Low_complexity 1 29 0 867 107 8 15 chr2 217636733 217636864 -35619719 + AluSg/x SINE Alu 178 307 -5 1080 137 80 0 chr2 217637422 217637470 -35619113 - AluJo SINE Alu -123 189 146 237 65 0 0 chr2 217637470 217637501 -35619082 + (TG)n Simple_repeat Simple_repeat 2 32 0 1080 137 80 0 chr2 217637501 217637627 -35618956 - AluJo SINE Alu -166 146 1 1630 59 118 0 chr2 217637710 217637914 -35618669 - AluY SINE Alu -83 228 1 567 308 14 61 chr2 217638088 217638367 -35618216 + MER102a DNA MER1_type 46 311 -19 2071 111 10 14 chr2 217639451 217639739 -35616844 + AluSg SINE Alu 11 297 -13 2353 103 3 0 chr2 217640970 217641272 -35615311 - AluSx SINE Alu -9 303 1 2239 101 0 3 chr2 217641891 217642187 -35614396 - AluSg SINE Alu -15 295 1 2159 124 0 7 chr2 217642493 217642792 -35613791 + AluSg SINE Alu 1 297 -13 1001 85 0 0 chr2 217643008 217643138 -35613445 + AluSc SINE Alu 176 305 -4 196 30 61 0 chr2 217646156 217646189 -35610394 + (TA)n Simple_repeat Simple_repeat 1 35 0 2241 103 31 0 chr2 217647833 217648123 -35608460 + AluSp SINE Alu 1 299 -14 498 252 53 15 chr2 217648229 217648360 -35608223 + MIR SINE MIR 9 144 -118 286 346 0 10 chr2 217648483 217648587 -35607996 - MER5A DNA MER1_type -4 185 83 221 277 79 40 chr2 217648502 217648603 -35607980 + MER5A DNA MER1_type 35 139 -50 * 872 169 225 0 chr2 217648611 217648824 -35607759 - L1MD3 LINE L1 -5 7990 7730 204 276 13 26 chr2 217648824 217648900 -35607683 - MER5A DNA MER1_type -114 75 1 180 0 0 0 chr2 217649749 217649769 -35606814 + (T)n Simple_repeat Simple_repeat 1 20 0 1557 93 0 0 chr2 217649783 217649976 -35606607 - AluSx SINE Alu -119 193 1 2321 85 0 0 chr2 217650461 217650742 -35605841 + AluSc SINE Alu 6 286 -23 1444 104 0 0 chr2 217650749 217650941 -35605642 + AluSg/x SINE Alu 121 312 0 252 176 103 0 chr2 217651332 217651400 -35605183 + MER116 DNA Mariner 1 75 -5 939 143 0 0 chr2 217651804 217651937 -35604646 - AluSq/x SINE Alu -180 133 1 699 97 0 0 chr2 217652951 217653044 -35603539 + Alu SINE Alu 210 302 -9 2156 101 0 39 chr2 217653356 217653664 -35602919 - AluSq SINE Alu -17 296 1 791 176 0 22 chr2 217653668 217653804 -35602779 - FLAM_A SINE Alu 0 133 1 335 150 67 0 chr2 217654848 217654908 -35601675 + FLAM_A SINE Alu 64 127 -6 2290 104 0 0 chr2 217655281 217655588 -35600995 + AluSq SINE Alu 1 307 -6 618 193 68 62 chr2 217655591 217655777 -35600806 + AluJb SINE Alu 122 308 0 282 225 28 0 chr2 217655805 217655876 -35600707 + L1ME LINE L1 5673 5745 -376 34 42 0 0 chr2 217656014 217656062 -35600521 + AT_rich Low_complexity Low_complexity 1 48 0 1671 201 7 3 chr2 217656851 217657154 -35599429 - AluJo SINE Alu -8 304 1 915 201 0 18 chr2 217657179 217657348 -35599235 - FAM SINE Alu -9 166 1 886 161 0 35 chr2 217657466 217657640 -35598943 + FAM SINE Alu 1 49 0 22 0 0 0 chr2 217658890 217658912 -35597671 + AT_rich Low_complexity Low_complexity 1 22 0 2000 91 58 7 chr2 217659203 217659478 -35597105 - AluSx SINE Alu -10 302 14 2036 113 28 3 chr2 217659703 217659986 -35596597 - AluSx SINE Alu -17 295 6 1979 119 6 61 chr2 217660203 217660379 -35596204 - AluSx SINE Alu -17 295 142 2610 47 3 0 chr2 217660379 217660678 -35595905 - AluSp SINE Alu -13 300 1 1979 119 6 61 chr2 217660678 217660813 -35595770 - AluSx SINE Alu -170 142 1 240 35 0 0 chr2 217664327 217664356 -35592227 + (TGAA)n Simple_repeat Simple_repeat 4 32 0 2189 114 0 35 chr2 217664406 217664722 -35591861 + AluSg SINE Alu 1 305 -5 600 40 0 0 chr2 217665273 217665347 -35591236 - AluSp/q SINE Alu -15 298 225 430 304 68 8 chr2 217665447 217665684 -35590899 - L1ME4a LINE L1 -227 5894 5644 2108 141 0 0 chr2 217666020 217666319 -35590264 + AluSx SINE Alu 2 300 -12 2280 114 0 3 chr2 217666336 217666643 -35589940 + AluSq SINE Alu 6 311 -2 2274 77 10 20 chr2 217667139 217667436 -35589147 + AluSq SINE Alu 1 294 -19 226 251 82 0 chr2 217667588 217667661 -35588922 + MER91 DNA MER1_type 1 66 -74 663 206 0 23 chr2 217668154 217668285 -35588298 - FLAM_A SINE Alu -4 129 2 2329 73 0 0 chr2 217668439 217668726 -35587857 - AluY SINE Alu -24 287 1 276 253 278 11 chr2 217668961 217669139 -35587444 + MIR SINE MIR 4 228 -34 740 246 65 22 chr2 217669191 217669423 -35587160 + MIR SINE MIR 20 261 -1 819 173 0 0 chr2 217669512 217669645 -35586938 + FLAM_C SINE Alu 1 133 0 23 0 0 0 chr2 217669645 217669668 -35586915 + AT_rich Low_complexity Low_complexity 1 23 0 925 155 13 7 chr2 217671220 217671375 -35585208 - AluJb SINE Alu -20 292 137 2164 84 4 7 chr2 217671385 217671660 -35584923 - AluSc SINE Alu -20 289 16 257 167 0 0 chr2 217671660 217671696 -35584887 - AluSc SINE Alu -265 36 1 1996 157 74 26 chr2 217671978 217672510 -35584073 - MLT2A2 LTR ERVL 0 554 1 322 239 69 31 chr2 217673299 217673458 -35583125 + L2 LINE L2 2740 2904 -410 1220 126 20 106 chr2 217673541 217673787 -35582796 - MLT1B LTR MaLR -2 388 164 1260 128 0 5 chr2 217673788 217673976 -35582607 - AluSg/x SINE Alu -1 311 125 475 158 37 204 chr2 217674083 217674235 -35582348 + L1ME2 LINE L1 5939 6024 -140 2174 112 0 3 chr2 217674235 217674540 -35582043 - AluSx SINE Alu 0 305 2 475 158 37 204 chr2 217674540 217674632 -35581951 + L1ME2 LINE L1 6024 6130 -34 2210 96 3 0 chr2 217674746 217675028 -35581555 - AluSp SINE Alu -30 283 1 2141 127 3 0 chr2 217675429 217675736 -35580847 - AluSx SINE Alu -4 308 1 2331 120 0 0 chr2 217675788 217676096 -35580487 - AluSx SINE Alu -4 308 1 2301 105 0 3 chr2 217676371 217676675 -35579908 + AluSx SINE Alu 1 303 -9 654 292 23 9 chr2 217676711 217676927 -35579656 - MIR SINE MIR 0 262 44 2482 61 0 19 chr2 217677765 217678075 -35578508 + AluY SINE Alu 1 304 -7 452 245 0 0 chr2 217678099 217678197 -35578386 + FLAM_A SINE Alu 32 129 -13 2288 100 7 0 chr2 217678199 217678499 -35578084 + AluSx SINE Alu 1 302 -10 1404 172 28 93 chr2 217678503 217678730 -35577853 - MER63B DNA MER1_type -731 331 91 4478 94 31 0 chr2 217678730 217679345 -35577238 + MER41B LTR ERV1 1 634 -1 1404 172 28 93 chr2 217679345 217679377 -35577206 - MER63B DNA MER1_type -971 91 58 2752 26 0 0 chr2 217679377 217679681 -35576902 + AluY SINE Alu 1 304 -7 1404 172 28 93 chr2 217679681 217679774 -35576809 - MER63B DNA MER1_type -1004 58 1 182 232 203 0 chr2 217679777 217679846 -35576737 - MIR SINE MIR -148 114 32 2317 91 7 3 chr2 217679899 217680208 -35576375 + AluSx SINE Alu 1 310 -2 354 204 88 78 chr2 217680273 217680567 -35576016 + L1MC5 LINE L1 7499 7795 -166 620 162 27 0 chr2 217680583 217680694 -35575889 + MER5A DNA MER1_type 1 114 -75 2243 116 7 0 chr2 217680698 217681001 -35575582 + AluSx SINE Alu 1 305 -7 1263 93 6 12 chr2 217681002 217681174 -35575409 + AluSg/x SINE Alu 133 303 -9 450 152 0 25 chr2 217681177 217681256 -35575327 + MER5A DNA MER1_type 113 189 0 334 169 17 0 chr2 217681259 217681318 -35575265 + L1MC5 LINE L1 7807 7866 -95 2188 133 0 3 chr2 217682273 217682582 -35574001 - AluSx SINE Alu -4 308 1 2208 105 3 3 chr2 217682593 217682889 -35573694 - AluSq SINE Alu -13 300 5 1941 143 40 35 chr2 217683023 217683423 -35573160 - L1MB3 LINE L1 0 6183 5782 250 171 23 34 chr2 217683436 217683524 -35573059 + (CATATA)n Simple_repeat Simple_repeat 2 88 0 1134 136 24 61 chr2 217683524 217683584 -35572999 - L1MB3 LINE L1 -385 5795 5734 2363 70 3 13 chr2 217683584 217683886 -35572697 - AluSp SINE Alu -14 299 1 1134 136 24 61 chr2 217683886 217684038 -35572545 - L1MB3 LINE L1 -446 5734 5591 2515 56 10 0 chr2 217684102 217684408 -35572175 - AluY SINE Alu -2 309 1 244 315 83 0 chr2 217684423 217684531 -35572052 - MIR SINE MIR -61 201 85 3393 105 17 21 chr2 217684989 217685371 -35571212 + MER75 DNA T2_type 1 382 -132 1941 118 3 65 chr2 217685371 217685694 -35570889 - AluSx SINE Alu -9 303 1 3393 105 17 21 chr2 217685694 217685827 -35570756 + MER75 DNA T2_type 382 514 0 255 61 0 0 chr2 217686144 217686177 -35570406 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 1377 202 0 19 chr2 217686202 217686469 -35570114 - AluJo SINE Alu -50 262 1 2085 124 3 7 chr2 217686719 217687017 -35569566 - AluSx SINE Alu -15 297 1 1285 83 0 42 chr2 217687173 217687365 -35569218 - L1PB1 LINE L1 0 6151 5968 2809 192 98 42 chr2 217687623 217687823 -35568760 + L1MC1 LINE L1 5472 5659 -674 2008 163 0 0 chr2 217687823 217688118 -35568465 + AluJb SINE Alu 5 299 -13 2809 192 98 42 chr2 217688118 217688293 -35568290 + L1MC1 LINE L1 5659 5823 -510 1861 160 10 0 chr2 217688293 217688581 -35568002 + AluSx SINE Alu 1 291 -21 2809 192 98 42 chr2 217688581 217689012 -35567571 + L1MC1 LINE L1 5823 6324 -9 2335 91 3 3 chr2 217689013 217689310 -35567273 + AluSp SINE Alu 1 297 -16 31 44 0 0 chr2 217689590 217689635 -35566948 + AT_rich Low_complexity Low_complexity 1 45 0 214 0 111 0 chr2 217689909 217689945 -35566638 + T-rich Low_complexity Low_complexity 1 40 0 1090 33 0 0 chr2 217689947 217690068 -35566515 - AluY SINE Alu -33 278 158 2254 92 7 30 chr2 217690116 217690420 -35566163 - AluSx SINE Alu -15 297 1 25 0 0 0 chr2 217690912 217690937 -35565646 + AT_rich Low_complexity Low_complexity 1 25 0 2397 82 10 0 chr2 217691457 217691761 -35564822 - AluY SINE Alu -3 308 2 400 311 62 6 chr2 217691830 217691991 -35564592 + L1ME4a LINE L1 5456 5625 -496 231 232 0 0 chr2 217692046 217692102 -35564481 + L1ME4a LINE L1 5990 6045 -76 23 0 0 0 chr2 217692104 217692127 -35564456 + AT_rich Low_complexity Low_complexity 1 23 0 2210 123 0 0 chr2 217692188 217692496 -35564087 + AluSx SINE Alu 1 308 -4 1338 75 30 249 chr2 217692945 217693306 -35563277 + AluSq SINE Alu 1 282 -31 1063 106 0 0 chr2 217693308 217693450 -35563133 + AluSg/x SINE Alu 162 303 -7 265 275 0 0 chr2 217693463 217693532 -35563051 + MIR3 SINE MIR 137 205 -3 2250 113 3 0 chr2 217693578 217693871 -35562712 + AluSq SINE Alu 1 294 -19 236 237 51 0 chr2 217693972 217694031 -35562552 + MIR SINE MIR 113 174 -88 1591 156 35 35 chr2 217694536 217694825 -35561758 + AluJo SINE Alu 1 289 -23 2182 91 7 14 chr2 217694891 217695206 -35561377 + AluSq SINE Alu 3 315 0 189 0 0 0 chr2 217695968 217695989 -35560594 + (TTTC)n Simple_repeat Simple_repeat 2 22 0 930 98 0 0 chr2 217696174 217696296 -35560287 - AluSg/x SINE Alu -17 293 172 196 311 11 0 chr2 217696710 217696800 -35559783 + L2 LINE L2 1809 1899 -1415 205 256 0 67 chr2 217696837 217696927 -35559656 + L2 LINE L2 2380 2463 -851 530 273 200 38 chr2 217696990 217697178 -35559405 + L2 LINE L2 2584 2740 -573 1801 125 14 31 chr2 217697178 217697495 -35559088 + AluSx SINE Alu 1 312 0 530 273 200 38 chr2 217697495 217697598 -35558985 + L2 LINE L2 2740 2825 -488 189 0 0 0 chr2 217697598 217697619 -35558964 + (CA)n Simple_repeat Simple_repeat 2 22 0 530 273 200 38 chr2 217697619 217697900 -35558683 + L2 LINE L2 2825 3257 -56 501 150 160 10 chr2 217697900 217698000 -35558583 + AluSq/x SINE Alu 11 125 -188 262 0 53 0 chr2 217698003 217698041 -35558542 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 182 216 0 0 chr2 217698051 217698088 -35558495 + L2 LINE L2 3269 3305 -8 787 181 0 8 chr2 217698246 217698379 -35558204 - FLAM_A SINE Alu -1 132 1 186 323 42 0 chr2 217698464 217698560 -35558023 + L2 LINE L2 2271 2370 -944 2405 97 0 0 chr2 217699679 217699979 -35556604 - AluSq SINE Alu -13 300 1 2315 98 0 3 chr2 217699986 217700283 -35556300 - AluSg SINE Alu -14 296 1 351 222 42 44 chr2 217700370 217700583 -35556000 - Charlie2 DNA MER1_type -182 2680 2425 2485 58 7 0 chr2 217700583 217700874 -35555709 - AluY SINE Alu -18 293 1 351 222 42 44 chr2 217700874 217700916 -35555667 - Charlie2 DNA MER1_type -437 2425 2384 334 192 211 39 chr2 217700917 217701021 -35555562 + MER3 DNA MER1_type 48 122 -87 3720 184 112 81 chr2 217701753 217702318 -35554265 + Charlie1a DNA MER1_type 1 547 -2214 2095 122 10 16 chr2 217702318 217702629 -35553954 + AluSx SINE Alu 1 309 -3 3720 184 112 81 chr2 217702629 217702828 -35553755 + Charlie1a DNA MER1_type 547 738 -2023 2147 143 3 3 chr2 217702828 217703136 -35553447 + AluSx SINE Alu 1 308 -4 3720 184 112 81 chr2 217703136 217703327 -35553256 + Charlie1a DNA MER1_type 738 922 -1839 2358 99 3 6 chr2 217703327 217703639 -35552944 + AluSx SINE Alu 1 311 -1 3720 184 112 81 chr2 217703639 217703762 -35552821 + Charlie1a DNA MER1_type 922 1040 -1721 338 123 0 41 chr2 217703762 217703835 -35552748 + L1PA16 LINE L1 6097 6166 0 3720 184 112 81 chr2 217703835 217703989 -35552594 + Charlie1a DNA MER1_type 1040 1274 -181 562 155 10 10 chr2 217704029 217704126 -35552457 + MER20 DNA MER1_type 119 215 -4 433 139 81 0 chr2 217704150 217704236 -35552347 + Charlie1a DNA MER1_type 1316 1408 -47 2690 34 0 0 chr2 217704633 217704929 -35551654 + AluY SINE Alu 1 296 -15 22 0 0 0 chr2 217704967 217704989 -35551594 + AT_rich Low_complexity Low_complexity 1 22 0 294 223 115 10 chr2 217705701 217705797 -35550786 - MIR3 SINE MIR -33 175 70 350 94 30 0 chr2 217705911 217705980 -35550603 + Alu SINE Alu 244 294 -8 280 164 15 0 chr2 217706154 217706221 -35550362 + L1ME4a LINE L1 6049 6116 -5 198 301 121 0 chr2 217706768 217706851 -35549732 + MIR3 SINE MIR 110 202 -6 2249 96 7 0 chr2 217708296 217708587 -35547996 + AluSx SINE Alu 1 293 -19 938 200 77 106 chr2 217709118 217709523 -35547060 - MSTD LTR MaLR -3 393 1 2325 93 0 7 chr2 217710117 217710419 -35546164 + AluSc SINE Alu 1 300 -9 2286 97 0 13 chr2 217710698 217711009 -35545574 + AluSq SINE Alu 1 307 -6 644 279 68 20 chr2 217711105 217711356 -35545227 + Charlie2 DNA MER1_type 81 343 -2439 267 194 16 16 chr2 217711358 217711420 -35545163 + Charlie2 DNA MER1_type 2799 2860 -2 321 281 214 5 chr2 217711434 217711644 -35544939 + MIR SINE MIR 2 255 -7 885 177 49 10 chr2 217711904 217712107 -35544476 + L1PA16 LINE L1 5956 6166 0 240 225 70 14 chr2 217712322 217712393 -35544190 + L2 LINE L2 3227 3301 -12 2158 94 29 0 chr2 217712400 217712677 -35543906 + AluSq SINE Alu 14 298 -15 2135 95 0 0 chr2 217712696 217712960 -35543623 + AluSq SINE Alu 1 264 -49 2123 115 7 20 chr2 217713025 217713321 -35543262 - AluSx SINE Alu -20 292 1 745 193 33 17 chr2 217713497 217713678 -35542905 - L1MC5 LINE L1 -53 7908 7725 26 64 0 0 chr2 217713711 217713758 -35542825 + AT_rich Low_complexity Low_complexity 1 47 0 4059 138 138 91 chr2 217714304 217714454 -35542129 + L1MC3 LINE L1 6707 6849 -936 207 0 0 0 chr2 217714454 217714477 -35542106 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 4059 138 138 91 chr2 217714477 217714730 -35541853 + L1MC3 LINE L1 6849 7089 -696 316 203 0 16 chr2 217714730 217714794 -35541789 + MLT1F1 LTR MaLR 49 111 -456 4059 138 138 91 chr2 217714794 217715351 -35541232 + L1MC3 LINE L1 7089 7779 -6 3207 182 48 6 chr2 217715390 217716050 -35540533 - L1MC2 LINE L1 0 6344 5657 1701 247 32 7 chr2 217716050 217716515 -35540068 - L1M4 LINE L1 -3257 2889 2413 2346 205 96 12 chr2 217716682 217717371 -35539212 - L1MC2 LINE L1 -2558 3588 2842 351 0 0 0 chr2 217717381 217717420 -35539163 + (TG)n Simple_repeat Simple_repeat 2 40 0 1217 137 0 0 chr2 217717425 217717586 -35538997 - AluSg/x SINE Alu -19 291 131 419 157 121 0 chr2 217717609 217717692 -35538891 - L1MC2 LINE L1 -3335 2811 2719 1894 139 20 14 chr2 217717730 217718025 -35538558 - AluSq SINE Alu -16 297 1 2793 137 26 16 chr2 217718035 217718369 -35538214 - L1MB7 LINE L1 -16 6168 5826 2459 86 3 3 chr2 217718369 217718682 -35537901 - AluSp SINE Alu 0 313 1 2793 137 26 16 chr2 217718682 217718838 -35537745 - L1MB7 LINE L1 -358 5826 5673 2267 108 3 0 chr2 217718844 217719141 -35537442 - AluSx SINE Alu -14 298 1 492 130 0 0 chr2 217719396 217719488 -35537095 + (TG)n Simple_repeat Simple_repeat 1 92 0 516 299 136 16 chr2 217721014 217721265 -35535318 + Charlie8 DNA MER1_type 2 282 -2135 2306 113 0 7 chr2 217721592 217721902 -35534681 + AluSq SINE Alu 1 308 -5 23 0 0 0 chr2 217723145 217723168 -35533415 + AT_rich Low_complexity Low_complexity 1 23 0 440 270 138 7 chr2 217723719 217723871 -35532712 + L3 LINE CR1 1095 1266 -311 267 174 0 0 chr2 217723923 217723969 -35532614 - L1ME LINE L1 -502 5619 5574 1701 144 12 57 chr2 217724518 217724735 -35531848 - L1MB8 LINE L1 -10 6168 5943 2162 110 0 10 chr2 217724735 217725036 -35531547 + AluSq SINE Alu 3 300 -13 441 0 0 0 chr2 217725036 217725085 -35531498 + (TA)n Simple_repeat Simple_repeat 1 49 0 1701 144 12 57 chr2 217725085 217725199 -35531384 - L1MB8 LINE L1 -233 5945 5851 2127 112 0 3 chr2 217725415 217725702 -35530881 - AluSx SINE Alu -25 287 2 191 329 81 54 chr2 217725922 217726071 -35530512 + L2 LINE L2 2911 3063 -209 281 221 26 0 chr2 217726187 217726264 -35530319 + MER116 DNA Mariner 2 80 0 233 177 21 31 chr2 217726865 217726961 -35529622 + (CATA)n Simple_repeat Simple_repeat 1 95 0 27 0 0 0 chr2 217726966 217726993 -35529590 + AT_rich Low_complexity Low_complexity 1 27 0 26 0 0 0 chr2 217727512 217727538 -35529045 + AT_rich Low_complexity Low_complexity 1 26 0 718 288 77 2 chr2 217727684 217727917 -35528666 + MIR SINE MIR 4 257 -5 1701 169 3 27 chr2 217730073 217730374 -35526209 + AluJo SINE Alu 1 294 -18 402 306 9 9 chr2 217731239 217731350 -35525233 - MIR3 SINE MIR -29 179 69 2032 85 48 7 chr2 217731803 217732099 -35524484 + AluSx SINE Alu 1 307 0 195 129 0 0 chr2 217732357 217732388 -35524195 + (TAA)n Simple_repeat Simple_repeat 2 32 0 563 271 5 89 chr2 217732507 217732710 -35523873 + MIR3 SINE MIR 22 207 -1 2339 90 3 0 chr2 217733540 217733839 -35522744 + AluSp SINE Alu 1 300 -13 285 119 0 0 chr2 217733939 217733981 -35522602 - L1MD3 LINE L1 -200 7795 7754 267 232 71 0 chr2 217734486 217734542 -35522041 - L2 LINE L2 -10 3262 3203 416 303 98 37 chr2 217734892 217735136 -35521447 + L3b LINE CR1 1155 1413 -170 683 314 123 56 chr2 217735615 217736329 -35520254 - L2 LINE L2 -1007 2307 1546 1941 133 0 48 chr2 217736516 217736655 -35519928 + AluJo SINE Alu 5 149 -163 2245 114 0 6 chr2 217736655 217736970 -35519613 + AluSp SINE Alu 1 313 0 1941 133 0 48 chr2 217736970 217737139 -35519444 + AluJo SINE Alu 149 298 -14 2120 128 0 26 chr2 217738897 217739209 -35517374 + AluSx SINE Alu 1 304 -8 1582 169 45 21 chr2 217740000 217740290 -35516293 + AluJb SINE Alu 1 297 -15 2297 82 0 0 chr2 217740681 217741010 -35515573 + AluY SINE Alu 2 330 0 295 228 193 18 chr2 217741184 217741298 -35515285 - L2 LINE L2 0 3313 3180 181 304 77 61 chr2 217741372 217741553 -35515030 - L2 LINE L2 -140 3173 2990 200 233 0 0 chr2 217741567 217741610 -35514973 + A-rich Low_complexity Low_complexity 1 43 0 1697 236 177 28 chr2 217741629 217742206 -35514377 - L2 LINE L2 -353 2961 2299 207 69 0 0 chr2 217742389 217742418 -35514165 + (CA)n Simple_repeat Simple_repeat 2 30 0 249 108 0 0 chr2 217743462 217743499 -35513084 + (TCCC)n Simple_repeat Simple_repeat 4 40 0 2171 99 7 0 chr2 217743501 217743785 -35512798 - AluSc SINE Alu -23 286 1 22 0 0 0 chr2 217743792 217743814 -35512769 + AT_rich Low_complexity Low_complexity 1 22 0 5345 129 46 7 chr2 217743814 217744681 -35511902 - L1MA5 LINE L1 -3 6297 5397 2570 47 0 0 chr2 217744969 217745266 -35511317 + AluY SINE Alu 1 297 -14 2163 95 3 0 chr2 217745764 217746047 -35510536 + AluSp SINE Alu 1 284 -29 348 127 0 0 chr2 217746266 217746321 -35510262 + (CA)n Simple_repeat Simple_repeat 2 56 0 225 0 0 0 chr2 217746321 217746346 -35510237 + (TA)n Simple_repeat Simple_repeat 1 25 0 249 33 0 0 chr2 217746664 217746694 -35509889 + (TG)n Simple_repeat Simple_repeat 2 31 0 281 286 31 20 chr2 217746859 217746957 -35509626 + L2 LINE L2 3185 3283 -30 2317 87 3 0 chr2 217747440 217747728 -35508855 + AluSg SINE Alu 6 294 -16 204 40 0 0 chr2 217747750 217747775 -35508808 + (TG)n Simple_repeat Simple_repeat 1 25 0 908 236 62 21 chr2 217749031 217749273 -35507310 - MIR SINE MIR 0 262 11 1028 197 70 13 chr2 217749321 217749731 -35506852 - MER113 DNA MER1_type? -35 486 1 1362 181 21 17 chr2 217751689 217751976 -35504607 - L1M4 LINE L1 -1908 4238 3951 849 99 0 0 chr2 217751999 217752110 -35504473 - FLAM_C SINE Alu -32 111 1 1058 213 21 0 chr2 217752110 217752345 -35504238 - L1M4 LINE L1 -2182 3964 3725 1545 87 5 0 chr2 217753079 217753275 -35503308 + AluSq SINE Alu 1 197 -116 23 33 0 0 chr2 217753280 217753310 -35503273 + AT_rich Low_complexity Low_complexity 1 30 0 2333 90 10 0 chr2 217753495 217753794 -35502789 - AluSq SINE Alu -11 302 1 229 196 98 0 chr2 217754493 217754544 -35502039 - L1ME4a LINE L1 -1 6120 6065 285 221 105 12 chr2 217754629 217754715 -35501868 + MIR SINE MIR 106 199 -63 502 208 135 31 chr2 217754876 217755068 -35501515 - L1ME4a LINE L1 -276 5845 5634 2738 42 0 0 chr2 217755288 217755654 -35500929 - AluY SINE Alu 0 366 1 2228 117 0 0 chr2 217755712 217756011 -35500572 - AluSx SINE Alu -13 299 1 573 301 83 9 chr2 217756862 217757092 -35499491 + MIR SINE MIR 15 260 -2 210 105 0 0 chr2 217757277 217757315 -35499268 + (A)n Simple_repeat Simple_repeat 1 38 0 390 345 91 0 chr2 217757330 217757495 -35499088 + MIR SINE MIR 1 180 -82 2280 94 10 0 chr2 217757511 217757809 -35498774 - AluSp SINE Alu -12 301 1 231 203 34 0 chr2 217757823 217757882 -35498701 - MIR SINE MIR -14 248 188 1512 176 7 15 chr2 217757926 217758198 -35498385 + AluJo SINE Alu 29 298 -14 252 261 0 0 chr2 217758403 217758468 -35498115 + L1ME3A LINE L1 6093 6157 -13 21 57 0 0 chr2 217759841 217759876 -35496707 + AT_rich Low_complexity Low_complexity 1 35 0 436 211 13 0 chr2 217759899 217759975 -35496608 + FRAM/FAM SINE Alu 1 69 -107 239 261 22 91 chr2 217760037 217760223 -35496360 - L1ME4a LINE L1 -144 5977 5800 234 0 0 0 chr2 217760292 217760318 -35496265 + (TTG)n Simple_repeat Simple_repeat 2 27 0 630 217 9 9 chr2 217760321 217760436 -35496147 - FLAM_A SINE Alu -18 124 10 936 287 49 36 chr2 217760493 217760963 -35495620 - L1ME4a LINE L1 -2077 5731 5256 443 141 0 0 chr2 217761147 217761225 -35495358 + AluS SINE Alu 232 309 -2 201 39 0 0 chr2 217761645 217761671 -35494912 + (T)n Simple_repeat Simple_repeat 1 26 0 214 254 342 0 chr2 217761962 217762076 -35494507 - MIR SINE MIR -1 261 109 478 206 145 88 chr2 217762665 217762893 -35493690 - Charlie8 DNA MER1_type -2150 267 27 1752 86 0 0 chr2 217763830 217764050 -35492533 + AluSg/x SINE Alu 86 305 -7 2448 81 0 0 chr2 217764058 217764354 -35492229 + AluSx SINE Alu 1 296 -16 40 37 0 0 chr2 217764468 217764522 -35492061 + AT_rich Low_complexity Low_complexity 1 54 0 385 221 23 0 chr2 217764998 217765084 -35491499 - MIR SINE MIR 0 262 175 215 310 17 0 chr2 217765397 217765455 -35491128 - L2 LINE L2 -2 3270 3212 225 236 208 42 chr2 217765572 217765644 -35490939 - L2 LINE L2 0 3272 3189 811 131 0 51 chr2 217766817 217766954 -35489629 + FLAM_C SINE Alu 8 137 -6 29 0 0 0 chr2 217766954 217766983 -35489600 + AT_rich Low_complexity Low_complexity 1 29 0 735 209 196 25 chr2 217767837 217768072 -35488511 + L1MD2 LINE L1 6069 6343 -16 2233 121 0 0 chr2 217768202 217768507 -35488076 + AluSx SINE Alu 1 305 -7 194 322 78 22 chr2 217769035 217769125 -35487458 - L2 LINE L2 -35 3237 3143 415 259 19 56 chr2 217769759 217769867 -35486716 - L2 LINE L2 -36 3236 3133 21 89 0 0 chr2 217769869 217769925 -35486658 + AT_rich Low_complexity Low_complexity 1 56 0 30 0 0 0 chr2 217770943 217770973 -35485610 + AT_rich Low_complexity Low_complexity 1 30 0 324 226 139 35 chr2 217771718 217771833 -35484750 - MER103 DNA DNA -36 130 4 206 189 65 204 chr2 217771837 217772038 -35484545 + MER91A DNA MER1_type 23 195 -1 191 216 0 0 chr2 217772073 217772110 -35484473 - MER5C DNA MER1_type -287 37 1 * 296 319 84 20 chr2 217772110 217772257 -35484326 - MIR3 SINE MIR -52 156 3 1387 189 58 33 chr2 217772485 217772784 -35483799 - AluJo SINE Alu 0 306 1 446 201 194 52 chr2 217772784 217772918 -35483665 + L2 LINE L2 3161 3313 0 580 233 104 96 chr2 217773095 217773359 -35483224 + L1MC4a LINE L1 5509 5778 -2030 360 0 0 0 chr2 217773359 217773399 -35483184 + (TG)n Simple_repeat Simple_repeat 2 41 0 580 233 104 96 chr2 217773399 217773490 -35483093 + L1MC4a LINE L1 5778 5867 -1941 1948 152 0 13 chr2 217773802 217774104 -35482479 + AluJo SINE Alu 3 300 -12 326 248 108 25 chr2 217774177 217774334 -35482249 - L1ME4a LINE L1 -11 6110 5941 587 263 62 0 chr2 217776075 217776235 -35480348 - MIR SINE MIR -5 257 88 262 306 105 45 chr2 217776282 217776596 -35479987 - L2 LINE L2 -665 2649 2317 255 185 37 0 chr2 217776607 217776661 -35479922 - L2 LINE L2 -1 3271 3216 202 266 138 0 chr2 217776750 217776844 -35479739 - MIR SINE MIR 0 262 156 191 154 154 0 chr2 217776861 217776900 -35479683 - L2 LINE L2 -12 3301 3257 * 770 224 62 26 chr2 217776877 217777069 -35479514 - MIR SINE MIR -28 234 36 247 274 42 42 chr2 217777070 217777165 -35479418 - MIR SINE MIR -122 140 46 295 342 150 23 chr2 217777352 217777612 -35478971 - L2 LINE L2 -1749 1565 1273 5141 122 71 69 chr2 217777767 217778758 -35477825 + L1MA4 LINE L1 4767 5755 -545 1484 141 58 17 chr2 217778758 217778999 -35477584 + AluJb SINE Alu 3 253 -59 5141 122 71 69 chr2 217778999 217779135 -35477448 + L1MA4 LINE L1 5755 5889 -411 2262 106 0 3 chr2 217779135 217779438 -35477145 + AluSc SINE Alu 1 302 -7 5141 122 71 69 chr2 217779438 217779834 -35476749 + L1MA4 LINE L1 5889 6289 -11 2751 20 0 0 chr2 217780103 217780403 -35476180 + AluYa5 SINE Alu 1 300 -11 531 253 124 21 chr2 217781342 217781528 -35475055 + MIR SINE MIR 20 224 -38 274 339 28 9 chr2 217781936 217782045 -35474538 + L2 LINE L2 3203 3313 0 372 235 196 46 chr2 217782134 217782287 -35474296 - MER5B DNA MER1_type 0 178 3 282 359 138 0 chr2 217782344 217782489 -35474094 + L2 LINE L2 3104 3268 -4 421 325 12 12 chr2 217782928 217783094 -35473489 - MIR3 SINE MIR -13 195 30 4070 144 27 15 chr2 217783573 217784245 -35472338 + L1MB7 LINE L1 5476 6155 -29 2384 95 0 0 chr2 217784410 217784714 -35471869 - AluSx SINE Alu -8 304 1 234 0 0 0 chr2 217785123 217785149 -35471434 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1855 142 0 0 chr2 217785152 217785427 -35471156 - AluSx SINE Alu -37 275 1 486 120 0 0 chr2 217789060 217789135 -35467448 + (TGGG)n Simple_repeat Simple_repeat 3 77 0 593 285 74 66 chr2 217791177 217791378 -35465205 - L2 LINE L2 0 3272 3067 1629 221 92 102 chr2 217791378 217791979 -35464604 + MLT1G1 LTR MaLR 1 595 0 593 285 74 66 chr2 217791979 217792033 -35464550 - L2 LINE L2 -205 3067 3015 288 246 0 0 chr2 217792416 217792473 -35464110 - L2 LINE L2 0 3313 3257 1431 194 10 21 chr2 217793011 217793332 -35463251 - AluJo SINE Alu 0 318 1 849 137 0 29 chr2 217793332 217793471 -35463112 - AluJb SINE Alu -177 135 1 633 209 311 33 chr2 217793528 217793772 -35462811 - MER102a DNA MER1_type -18 312 1 747 234 75 15 chr2 217794323 217794524 -35462059 + MIR SINE MIR 31 243 -19 456 250 9 56 chr2 217795693 217795801 -35460782 + MIR3 SINE MIR 101 203 -5 233 243 40 40 chr2 217796795 217796869 -35459714 + MIR3 SINE MIR 90 163 -45 684 195 140 65 chr2 217796924 217797124 -35459459 - MIR SINE MIR -15 247 33 1882 162 3 10 chr2 217797794 217798108 -35458475 - AluJb SINE Alu 0 312 1 241 255 88 20 chr2 217800079 217800181 -35456402 + L2 LINE L2 3205 3313 0 964 213 51 21 chr2 217800401 217800636 -35455947 + MIR SINE MIR 2 243 -19 946 104 14 14 chr2 217800854 217800998 -35455585 + FRAM SINE Alu 25 168 -8 239 214 58 58 chr2 217800998 217801101 -35455482 + MIR SINE MIR 89 191 -71 2255 114 0 0 chr2 217801122 217801420 -35455163 + AluSx SINE Alu 1 298 -14 1478 245 125 26 chr2 217801656 217802191 -35454392 - L1MC4a LINE L1 -1904 5904 5317 1729 149 29 11 chr2 217802206 217802487 -35454096 - AluJb SINE Alu -17 295 10 466 113 0 0 chr2 217802520 217802582 -35454001 + AluS SINE Alu 2 63 -255 236 304 100 47 chr2 217802711 217803010 -35453573 - L2 LINE L2 -1147 2167 1853 2053 233 143 17 chr2 217803277 217803939 -35452644 + L2 LINE L2 1423 2168 -1146 1908 154 3 0 chr2 217804248 217804533 -35452050 + AluSx SINE Alu 8 293 -19 480 318 18 6 chr2 217805475 217805645 -35450938 - MIR SINE MIR -36 226 55 966 228 43 9 chr2 217806487 217806698 -35449885 + MER20 DNA MER1_type 1 218 -1 1354 122 0 0 chr2 217807273 217807453 -35449130 + AluSx SINE Alu 1 180 -132 2281 109 0 19 chr2 217808147 217808460 -35448123 + AluSx SINE Alu 2 308 -4 2179 98 6 41 chr2 217809574 217809755 -35446828 - AluSg SINE Alu -6 304 137 2521 64 0 0 chr2 217809755 217810066 -35446517 - AluY SINE Alu 0 311 1 2179 98 6 41 chr2 217810066 217810199 -35446384 - AluSg SINE Alu -173 137 1 289 257 0 29 chr2 217810212 217810282 -35446301 + L2 LINE L2 3203 3270 -2 184 344 33 0 chr2 217810380 217810441 -35446142 - L3 LINE CR1 -429 1148 1086 1882 156 26 19 chr2 217810488 217810796 -35445787 + AluJb SINE Alu 1 310 -2 182 118 29 0 chr2 217812053 217812087 -35444496 + GA-rich Low_complexity Low_complexity 3 37 0 2400 77 3 13 chr2 217813987 217814300 -35442283 - AluSp SINE Alu -3 310 1 338 264 58 58 chr2 217815690 217815811 -35440772 - MER5A DNA MER1_type -10 179 59 234 152 65 0 chr2 217815898 217815944 -35440639 + L3 LINE CR1 1528 1576 -1 243 341 23 45 chr2 217818076 217818208 -35438375 - MIR3 SINE MIR -52 156 28 2214 225 40 81 chr2 217819049 217819777 -35436806 + MER21B LTR ERV1 17 714 -149 237 204 0 0 chr2 217819942 217819986 -35436597 - MER103 DNA DNA -67 99 56 1530 169 0 83 chr2 217820685 217821010 -35435573 + AluJo SINE Alu 1 298 -14 1903 110 0 29 chr2 217821066 217821338 -35435245 - AluSg SINE Alu -14 296 33 516 185 29 171 chr2 217821870 217822075 -35434508 + MIR SINE MIR 63 238 -24 27 0 0 0 chr2 217822127 217822154 -35434429 + AT_rich Low_complexity Low_complexity 1 27 0 489 89 25 13 chr2 217822951 217823030 -35433553 + MADE1 DNA Mariner 1 80 0 1118 306 138 22 chr2 217823054 217823363 -35433220 + L3 LINE CR1 654 926 -651 1737 175 0 35 chr2 217823363 217823677 -35432906 + AluJo SINE Alu 6 308 -4 1118 306 138 22 chr2 217823677 217823798 -35432785 + L3 LINE CR1 926 1032 -545 2220 87 0 13 chr2 217823798 217824098 -35432485 + AluSg SINE Alu 1 296 -14 1118 306 138 22 chr2 217824098 217824260 -35432323 + L3 LINE CR1 1032 1316 -261 226 302 0 16 chr2 217824362 217824425 -35432158 + MIR SINE MIR 86 147 -115 287 325 102 51 chr2 217824427 217824584 -35431999 - L2 LINE L2 0 3272 3108 24 0 0 0 chr2 217824915 217824939 -35431644 + AT_rich Low_complexity Low_complexity 1 24 0 363 263 169 31 chr2 217826247 217826407 -35430176 + MER5A DNA MER1_type 8 189 0 1348 74 17 6 chr2 217826424 217826600 -35429983 - AluSg/x SINE Alu -14 298 121 563 271 5 89 chr2 217827466 217827669 -35428914 - MIR3 SINE MIR -1 207 22 195 129 0 0 chr2 217827788 217827819 -35428764 + (TTA)n Simple_repeat Simple_repeat 2 32 0 2025 73 48 18 chr2 217828077 217828376 -35428207 - AluSx SINE Alu 0 307 1 1760 86 0 0 chr2 217828384 217828605 -35427978 - AluSg/x SINE Alu -6 304 84 496 202 145 88 chr2 217829542 217829770 -35426813 + Charlie8 DNA MER1_type 27 267 -2150 191 253 213 0 chr2 217830359 217830434 -35426149 + MIR SINE MIR 109 199 -63 2436 86 3 3 chr2 217831569 217831882 -35424701 - AluSq SINE Alu 0 313 1 330 289 19 10 chr2 217832092 217832196 -35424387 - L2 LINE L2 -8 3305 3201 692 50 0 0 chr2 217832746 217832826 -35423757 - MADE1 DNA Mariner 0 80 1 1912 161 3 7 chr2 217833029 217833334 -35423249 - AluJo SINE Alu -8 304 1 294 248 80 44 chr2 217834719 217834832 -35421751 + MLT1L LTR MaLR 352 468 -147 317 206 0 27 chr2 217834943 217835016 -35421567 + MLT1L LTR MaLR 542 612 -3 286 343 49 0 chr2 217835019 217835121 -35421462 - MIR SINE MIR -71 137 31 708 276 74 8 chr2 217835186 217835429 -35421154 + MIR SINE MIR 2 260 -2 262 359 102 71 chr2 217835617 217835971 -35420612 - L2 LINE L2 -88 3184 2820 26 0 0 0 chr2 217836838 217836864 -35419719 + AT_rich Low_complexity Low_complexity 1 26 0 290 343 64 14 chr2 217837019 217837159 -35419424 - MIR3 SINE MIR -2 206 60 537 88 0 0 chr2 217837968 217838036 -35418547 + L1PA7 LINE L1 6077 6144 -10 700 250 95 20 chr2 217838496 217838696 -35417887 + MIR SINE MIR 8 222 -40 197 314 86 0 chr2 217839480 217839550 -35417033 - L2 LINE L2 -9 3304 3229 758 280 15 61 chr2 217839890 217840154 -35416429 - MIR SINE MIR -10 252 1 418 277 21 28 chr2 217840654 217840795 -35415788 - L2 LINE L2 -926 2388 2249 1818 154 0 38 chr2 217841225 217841543 -35415040 + AluJo SINE Alu 1 306 -6 1597 176 0 11 chr2 217842076 217842337 -35414246 - AluJo SINE Alu -52 260 3 1274 142 15 19 chr2 217842607 217842812 -35413771 + Tigger2a DNA MER2_type 1 204 -230 375 173 0 0 chr2 217842884 217842965 -35413618 + CT-rich Low_complexity Low_complexity 2 82 0 1798 193 0 0 chr2 217842965 217843261 -35413322 - AluJo SINE Alu -15 297 2 2331 89 0 7 chr2 217843266 217843570 -35413013 - AluSg SINE Alu -8 302 1 1457 120 21 46 chr2 217843570 217843744 -35412839 + Tigger2a DNA MER2_type 200 368 -2340 2534 63 0 0 chr2 217843744 217844043 -35412540 - AluY SINE Alu -12 299 1 1457 120 21 46 chr2 217844043 217844109 -35412474 + Tigger2a DNA MER2_type 368 434 0 1247 221 69 72 chr2 217844744 217845085 -35411498 - L1MC5 LINE L1 -44 7917 7577 2210 94 35 0 chr2 217845085 217845371 -35411212 - AluSx SINE Alu -14 298 3 1247 221 69 72 chr2 217845371 217845652 -35410931 - L1MC5 LINE L1 -384 7577 7297 214 374 47 42 chr2 217845861 217846051 -35410532 + L2 LINE L2 2910 3100 -172 27 0 0 0 chr2 217846125 217846152 -35410431 + AT_rich Low_complexity Low_complexity 1 27 0 2518 53 0 13 chr2 217846395 217846698 -35409885 + AluY SINE Alu 1 299 -12 187 339 0 0 chr2 217847217 217847273 -35409310 - L2 LINE L2 -8 3264 3209 1958 145 0 29 chr2 217847362 217847673 -35408910 - AluJo SINE Alu -10 302 1 919 223 83 13 chr2 217848953 217849182 -35407401 + MIR SINE MIR 8 252 -10 580 288 100 28 chr2 217849466 217849786 -35406797 + L2 LINE L2 2804 3146 -167 224 334 76 80 chr2 217849834 217850148 -35406435 - L2 LINE L2 -10 3262 2950 215 233 0 0 chr2 217852012 217852055 -35404528 - MIR3 SINE MIR -5 203 161 784 226 105 119 chr2 217852092 217852521 -35404062 + MLT1L LTR MaLR 46 468 -147 257 200 0 53 chr2 217852632 217852707 -35403876 + MLT1L LTR MaLR 542 612 -3 245 351 53 0 chr2 217852719 217852813 -35403770 - MIR SINE MIR -79 129 31 845 233 64 39 chr2 217853093 217853376 -35403207 + AluJo SINE Alu 19 308 -4 208 147 0 0 chr2 217854726 217854760 -35401823 + (A)n Simple_repeat Simple_repeat 1 34 0 186 43 0 0 chr2 217854857 217854880 -35401703 + (CTG)n Simple_repeat Simple_repeat 3 25 0 505 209 148 0 chr2 217856528 217856643 -35399940 - MER3 DNA MER1_type -4 205 74 2131 127 112 12 chr2 217856752 217857083 -35399500 + THE1B LTR MaLR 1 364 0 1928 135 20 17 chr2 217857880 217858176 -35398407 + AluSx SINE Alu 1 297 -15 269 325 35 9 chr2 217858233 217858347 -35398236 - MIR3 SINE MIR -6 202 86 * 306 242 258 56 chr2 217858334 217858532 -35398051 + L2 LINE L2 2877 3114 -199 3131 160 6 13 chr2 217858538 217858563 -35398020 - L1MC3 LINE L1 -7 7778 7754 2147 112 7 3 chr2 217858563 217858868 -35397715 - AluSq SINE Alu -7 306 1 3131 160 6 13 chr2 217858868 217859387 -35397196 - L1MC3 LINE L1 -31 7754 7238 538 306 20 30 chr2 217859390 217859589 -35396994 + L2 LINE L2 3117 3313 0 21 36 0 0 chr2 217860031 217860059 -35396524 + AT_rich Low_complexity Low_complexity 1 28 0 333 269 0 83 chr2 217860144 217860252 -35396331 + MIR SINE MIR 25 123 -85 1926 145 0 41 chr2 217861379 217861517 -35395066 + AluJo SINE Alu 1 143 -169 2403 88 7 0 chr2 217861517 217861825 -35394758 + AluY SINE Alu 1 310 -1 1926 145 0 41 chr2 217861825 217862003 -35394580 + AluJo SINE Alu 143 304 -8 336 243 125 7 chr2 217862015 217862151 -35394432 - L1ME4a LINE L1 -1 6120 5969 255 79 0 0 chr2 217862245 217862283 -35394300 + (A)n Simple_repeat Simple_repeat 1 38 0 305 290 0 0 chr2 217862771 217862840 -35393743 - L2 LINE L2 -2 3311 3243 265 245 128 11 chr2 217863006 217863100 -35393483 + L2 LINE L2 2943 3047 -225 326 307 150 0 chr2 217863215 217863368 -35393215 - MIR SINE MIR -1 261 86 303 344 24 24 chr2 217863381 217863506 -35393077 + L2 LINE L2 3146 3270 -2 5406 93 11 38 chr2 217864692 217865507 -35391076 + L1PB1 LINE L1 5359 6151 0 1819 88 4 4 chr2 217865529 217865767 -35390816 - AluSq SINE Alu -1 312 75 2033 69 0 8 chr2 217865775 217866037 -35390546 - AluY SINE Alu -2 309 50 227 300 154 36 chr2 217866630 217866740 -35389843 - L2 LINE L2 -3 3269 3147 2332 112 0 0 chr2 217866979 217867282 -35389301 + AluSg SINE Alu 1 303 -7 2278 95 3 0 chr2 217868106 217868400 -35388183 + AluSx SINE Alu 1 295 -17 564 301 34 34 chr2 217868794 217869000 -35387583 - MIR SINE MIR -4 258 53 2190 96 0 0 chr2 217869655 217869964 -35386619 + AluSx SINE Alu 1 309 0 1821 163 0 16 chr2 217870107 217870414 -35386169 + AluSx SINE Alu 1 302 -10 234 0 0 0 chr2 217870415 217870441 -35386142 + (CA)n Simple_repeat Simple_repeat 2 27 0 1183 211 91 35 chr2 217870619 217870937 -35385646 + MER2 DNA MER2_type 10 345 0 451 302 198 31 chr2 217871306 217871837 -35384746 + L2 LINE L2 1697 2138 -1176 2364 110 0 0 chr2 217871837 217872146 -35384437 + AluSc SINE Alu 1 309 0 451 302 198 31 chr2 217872146 217872586 -35383997 + L2 LINE L2 2135 2882 -429 227 182 23 0 chr2 217872586 217872630 -35383953 + C-rich Low_complexity Low_complexity 3 47 0 285 163 0 0 chr2 217872661 217872704 -35383879 + Alu SINE Alu 1 43 -260 1846 158 0 20 chr2 217872762 217873059 -35383524 + AluJo SINE Alu 1 291 -21 621 158 32 0 chr2 217873391 217873486 -35383097 - U6 snRNA snRNA -9 98 1 586 243 62 7 chr2 217873501 217873645 -35382938 + L2 LINE L2 3121 3272 0 258 270 35 17 chr2 217875372 217875487 -35381096 - L1ME4a LINE L1 -4 6117 6001 838 285 102 29 chr2 217875527 217876015 -35380568 - L1ME4a LINE L1 -188 5933 5410 2077 192 54 72 chr2 217876016 217876532 -35380051 - MLT1E2 LTR MaLR 0 626 137 288 102 0 0 chr2 217876846 217876895 -35379688 - L1MB3 LINE L1 -2 6181 6133 783 218 13 0 chr2 217876895 217877051 -35379532 - FRAM SINE Alu -18 158 1 922 51 0 8 chr2 217877052 217877170 -35379413 - L1MB2 LINE L1 -40 6131 6015 1946 114 34 74 chr2 217877170 217877521 -35379062 + MER1B DNA MER1_type 1 337 -2 357 125 0 16 chr2 217877523 217877587 -35378996 - L1MB2 LINE L1 -149 6022 5960 681 244 202 0 chr2 217877616 217877668 -35378915 - MIR SINE MIR -2 260 220 1539 146 0 9 chr2 217877668 217877951 -35378632 + AluJb SINE Alu 64 312 0 681 244 202 0 chr2 217877951 217878111 -35378472 - MIR SINE MIR -42 220 5 21 36 0 0 chr2 217878363 217878391 -35378192 + AT_rich Low_complexity Low_complexity 1 28 0 242 281 167 18 chr2 217880002 217880116 -35376467 + L2 LINE L2 3142 3272 0 1593 162 6 68 chr2 217880318 217880639 -35375944 - AluJo SINE Alu -11 301 1 485 119 0 89 chr2 217880818 217880919 -35375664 + MER50 LTR ERV1 502 593 -141 877 163 0 0 chr2 217880938 217881073 -35375510 + AluSq/x SINE Alu 1 135 -177 1714 173 10 3 chr2 217881073 217881368 -35375215 + AluSx SINE Alu 1 297 -15 237 277 74 68 chr2 217881509 217881657 -35374926 - MER5A DNA MER1_type -2 187 39 2366 102 0 3 chr2 217881706 217882019 -35374564 + AluSx SINE Alu 1 312 0 262 331 8 38 chr2 217882031 217882164 -35374419 - MER5A DNA MER1_type -54 135 7 2191 115 7 3 chr2 217882278 217882583 -35374000 + AluSx SINE Alu 1 306 -6 985 71 16 8 chr2 217882870 217882996 -35373587 - AluSp SINE Alu -186 127 1 1378 167 0 9 chr2 217883056 217883277 -35373306 + AluJb SINE Alu 85 303 -9 1905 134 26 23 chr2 217884170 217884477 -35372106 + AluJo SINE Alu 2 309 -3 349 127 0 0 chr2 217884547 217884602 -35371981 + Alu SINE Alu 248 302 0 2229 91 0 23 chr2 217884683 217884991 -35371592 - AluSg SINE Alu -9 301 1 465 290 55 89 chr2 217885157 217885450 -35371133 + MLT1K LTR MaLR 144 426 -162 269 24 24 24 chr2 217886501 217886542 -35370041 - L1MA9 LINE L1 0 6312 6272 2191 100 3 30 chr2 217887290 217887591 -35368992 - AluSx SINE Alu -19 293 1 2469 60 0 0 chr2 217887810 217888127 -35368456 + AluY SINE Alu 1 317 0 556 237 126 19 chr2 217888283 217888490 -35368093 + MIR SINE MIR 32 260 -2 859 152 0 0 chr2 217888490 217888622 -35367961 + FLAM_A SINE Alu 1 132 -1 2220 112 3 0 chr2 217888797 217889091 -35367492 + AluSp SINE Alu 1 295 -18 751 346 122 19 chr2 217889095 217889626 -35366957 + L3 LINE CR1 990 1575 -2 319 266 246 53 chr2 217889639 217889689 -35366894 - MLT1K LTR MaLR -12 576 537 1779 163 7 20 chr2 217889689 217889990 -35366593 + AluJb SINE Alu 1 297 -15 319 266 246 53 chr2 217889990 217890146 -35366437 - MLT1K LTR MaLR -51 537 330 233 319 14 0 chr2 217890523 217890595 -35365988 + L1MC4a LINE L1 6511 6583 -1225 423 0 0 0 chr2 217890605 217890652 -35365931 + (TAGA)n Simple_repeat Simple_repeat 2 48 0 2289 101 29 64 chr2 217890652 217890691 -35365892 - THE1B LTR MaLR -1 363 324 2283 109 3 16 chr2 217890691 217891003 -35365580 + AluSg SINE Alu 1 308 -2 2289 101 29 64 chr2 217891003 217891338 -35365245 - THE1B LTR MaLR -40 324 2 965 60 27 0 chr2 217891338 217891488 -35365095 + (TAGA)n Simple_repeat Simple_repeat 2 155 0 231 225 0 0 chr2 217891494 217891534 -35365049 + MER66A LTR ERV1 299 338 -140 1089 272 61 17 chr2 217891539 217891757 -35364826 + L1MC4a LINE L1 6604 6840 -968 2028 134 7 13 chr2 217891757 217892063 -35364520 + AluSx SINE Alu 1 304 -8 1089 272 61 17 chr2 217892063 217892138 -35364445 + L1MC4a LINE L1 6840 6910 -898 1127 129 0 18 chr2 217892412 217892575 -35364008 - AluJ SINE Alu -6 306 147 3505 180 92 58 chr2 217892575 217893691 -35362892 + MER52A LTR ERV1 1 1276 -2 894 183 0 7 chr2 217893691 217893844 -35362739 - AluJ SINE Alu -160 152 1 398 311 43 27 chr2 217894026 217894283 -35362300 - MIR SINE MIR 0 262 2 2336 96 0 0 chr2 217894863 217895166 -35361417 + AluSg SINE Alu 1 303 -7 306 325 42 97 chr2 217895318 217895773 -35360810 - L2 LINE L2 -16 3256 2827 2265 111 0 9 chr2 217896217 217896532 -35360051 + AluSx SINE Alu 1 312 0 261 299 13 0 chr2 217896679 217896756 -35359827 + MIR SINE MIR 171 248 -14 702 198 8 0 chr2 217896756 217896877 -35359706 + FLAM_C SINE Alu 3 124 -19 1480 187 0 38 chr2 217897124 217897266 -35359317 + AluJo SINE Alu 1 128 -184 2432 70 3 0 chr2 217897266 217897564 -35359019 + AluY SINE Alu 1 299 -12 1480 187 0 38 chr2 217897564 217897710 -35358873 + AluJo SINE Alu 128 278 -34 393 75 0 0 chr2 217897714 217897767 -35358816 + (GGGA)n Simple_repeat Simple_repeat 4 56 0 628 204 0 0 chr2 217897952 217898065 -35358518 + FLAM_C SINE Alu 11 123 -20 184 106 0 64 chr2 217898071 217898118 -35358465 + (TTAA)n Simple_repeat Simple_repeat 1 44 0 1003 198 82 33 chr2 217898458 217898675 -35357908 - MLT1K LTR MaLR -9 579 347 3335 157 26 4 chr2 217898675 217899177 -35357406 + MLT2B3 LTR ERVL 1 517 -37 219 114 0 0 chr2 217899177 217899212 -35357371 + (TCTA)n Simple_repeat Simple_repeat 3 37 0 3335 157 26 4 chr2 217899212 217899251 -35357332 + MLT2B3 LTR ERVL 517 554 0 1003 198 82 33 chr2 217899251 217899276 -35357307 - MLT1K LTR MaLR -241 347 325 207 98 49 24 chr2 217899612 217899653 -35356930 + (TTAA)n Simple_repeat Simple_repeat 1 42 0 650 90 0 0 chr2 217899758 217899847 -35356736 + L1PA5 LINE L1 6066 6154 0 2207 109 0 0 chr2 217900118 217900433 -35356150 + AluSq SINE Alu 1 315 0 2530 191 31 54 chr2 217900858 217901377 -35355206 - MLT2B1 LTR ERVL -8 512 6 1083 160 48 39 chr2 217901576 217901807 -35354776 - AluSq SINE Alu -78 235 3 384 265 77 47 chr2 217902027 217902197 -35354386 + MER5B DNA MER1_type 1 175 -3 2239 118 0 3 chr2 217902224 217902529 -35354054 - AluSq SINE Alu -7 306 3 2248 109 0 0 chr2 217902896 217903190 -35353393 - AluSx SINE Alu -18 294 1 191 328 30 0 chr2 217903224 217903291 -35353292 - L2 LINE L2 -18 3254 3186 242 229 121 24 chr2 217903468 217903551 -35353032 - L2 LINE L2 -647 2667 2577 * 276 290 192 37 chr2 217903548 217903876 -35352707 + L2 LINE L2 2582 2960 -354 246 254 26 70 chr2 217904033 217904147 -35352436 + L2 LINE L2 3162 3270 -2 212 196 22 0 chr2 217904915 217904961 -35351622 + GA-rich Low_complexity Low_complexity 2 48 0 313 329 27 23 chr2 217904989 217905208 -35351375 - L2 LINE L2 -1290 2024 1805 864 216 87 22 chr2 217905294 217905525 -35351058 + MIR SINE MIR 6 251 -11 24 0 0 0 chr2 217905542 217905566 -35351017 + AT_rich Low_complexity Low_complexity 1 24 0 14118 174 39 36 chr2 217905613 217905967 -35350616 - L1PB1 LINE L1 -5 6862 6511 270 0 0 0 chr2 217905967 217905997 -35350586 + (TG)n Simple_repeat Simple_repeat 2 31 0 * 279 0 0 0 chr2 217905996 217906027 -35350556 + (TA)n Simple_repeat Simple_repeat 1 31 0 14118 174 39 36 chr2 217905997 217908625 -35347958 - L1PB1 LINE L1 -356 6511 3894 2073 132 0 11 chr2 217908625 217908912 -35347671 - AluSx SINE Alu -28 284 1 14118 174 39 36 chr2 217908912 217910128 -35346455 - L1PB1 LINE L1 -2973 3894 2652 2002 148 0 0 chr2 217910128 217910432 -35346151 - AluY SINE Alu -7 304 1 14118 174 39 36 chr2 217910432 217911338 -35345245 - L1PB1 LINE L1 -4215 2652 1751 1650 130 14 75 chr2 217911338 217911706 -35344877 - MER4A LTR ERV1 0 664 261 472 126 126 0 chr2 217911706 217911793 -35344790 - MER4A LTR ERV1 -566 98 1 10963 116 29 23 chr2 217911793 217913531 -35343052 - L1PB1 LINE L1 -5109 1754 7 1154 257 52 34 chr2 217913713 217914094 -35342489 - LTR33 LTR ERVL -8 513 126 242 216 0 0 chr2 217914588 217914639 -35341944 - L2 LINE L2 0 3313 3263 2453 33 11 0 chr2 217914849 217915125 -35341458 - AluY SINE Alu -9 302 24 923 226 0 0 chr2 217915229 217915397 -35341186 + FAM SINE Alu 1 168 -7 25 0 0 0 chr2 217915397 217915422 -35341161 + AT_rich Low_complexity Low_complexity 1 25 0 189 364 65 0 chr2 217915495 217915572 -35341011 - MIR SINE MIR -158 104 23 857 239 88 22 chr2 217915670 217915942 -35340641 - LTR33A LTR ERVL -6 517 228 864 154 0 0 chr2 217916280 217916410 -35340173 + FLAM_C SINE Alu 1 130 -3 850 175 95 44 chr2 217916418 217916675 -35339908 + MER39 LTR ERV1 303 542 0 2265 101 0 0 chr2 217916981 217917292 -35339291 + AluSc SINE Alu 1 311 0 2286 196 59 105 chr2 217917423 217918148 -35338435 + LTR8A LTR ERV1 36 727 0 667 271 99 5 chr2 217918239 217918431 -35338152 + MER63A DNA MER1_type 1 210 0 638 286 113 0 chr2 217918435 217918620 -35337963 - LTR16A LTR ERVL -229 221 16 427 235 0 118 chr2 217918942 217919132 -35337451 + MIR SINE MIR 34 196 -66 2367 101 0 3 chr2 217919132 217919438 -35337145 - AluSx SINE Alu -7 305 1 427 235 0 118 chr2 217919438 217919468 -35337115 + MIR SINE MIR 196 228 -34 736 181 0 8 chr2 217919656 217919789 -35336794 + FLAM_C SINE Alu 2 133 0 661 308 111 7 chr2 217919991 217920270 -35336313 - MER115 DNA AcHobo -268 425 118 718 177 9 0 chr2 217920468 217920581 -35336002 + AluJo/FLAM SINE Alu 3 116 -196 2309 114 0 3 chr2 217920581 217920888 -35335695 - AluSx SINE Alu -6 306 1 1971 155 64 82 chr2 217921343 217921794 -35334789 + LTR47B LTR ERVL 1 443 0 1324 175 94 45 chr2 217921805 217922091 -35334492 - AluJo SINE Alu -12 300 1 290 68 0 0 chr2 217922223 217922267 -35334316 - AluSp/q SINE Alu -4 299 256 412 155 0 0 chr2 217922267 217922338 -35334245 + AluJ/FRAM SINE Alu 229 299 -13 231 146 0 0 chr2 217923377 217923418 -35333165 + (CA)n Simple_repeat Simple_repeat 1 41 0 877 291 104 39 chr2 217924244 217924969 -35331614 + L2 LINE L2 2540 3305 -8 263 116 0 0 chr2 217925022 217925065 -35331518 - AluY SINE Alu -5 297 255 1415 88 0 54 chr2 217925068 217925273 -35331310 - AluY SINE Alu -117 194 1 1508 157 9 0 chr2 217925904 217926134 -35330449 + AluJo SINE Alu 66 297 -15 571 244 30 76 chr2 217926727 217926924 -35329659 + MER5A DNA MER1_type 1 188 -1 842 144 0 0 chr2 217927005 217927123 -35329460 - FLAM_C SINE Alu -25 118 1 2456 217 87 66 chr2 217927170 217927453 -35329130 + MER97c DNA MER1_type? 87 363 -727 2169 62 29 0 chr2 217927453 217927777 -35328806 - AluY SINE Alu 0 332 1 2456 217 87 66 chr2 217927777 217928428 -35328155 + MER97c DNA MER1_type? 363 1041 -49 960 182 71 0 chr2 217928457 217928627 -35327956 - AluJb SINE Alu -7 305 124 389 275 95 5 chr2 217928681 217928870 -35327713 - HAL1b LINE L1 -710 638 433 1338 174 17 13 chr2 217929009 217929245 -35327338 - AluJo SINE Alu -6 306 70 2102 105 0 58 chr2 217929733 217930046 -35326537 - AluSg SINE Alu -15 295 1 1601 139 157 0 chr2 217930136 217930251 -35326332 + AluJo SINE Alu 1 97 -215 249 33 0 0 chr2 217930251 217930281 -35326302 + (TAAAA)n Simple_repeat Simple_repeat 3 32 0 1601 139 157 0 chr2 217930281 217930432 -35326151 + AluJo SINE Alu 97 309 -3 1978 176 11 35 chr2 217930441 217930815 -35325768 + MLT1A1 LTR MaLR 1 365 0 483 117 0 0 chr2 217931377 217931471 -35325112 + (CCCTG)n Simple_repeat Simple_repeat 2 95 0 2238 88 27 0 chr2 217931473 217931770 -35324813 - AluSq SINE Alu -8 305 1 204 207 0 35 chr2 217931897 217931955 -35324628 + T-rich Low_complexity Low_complexity 5 60 0 2695 177 56 34 chr2 217932001 217932578 -35324005 - MER90 LTR ERV1 0 614 3 810 188 16 178 chr2 217932585 217932889 -35323694 - L1ME3 LINE L1 -294 5868 5614 1932 116 86 3 chr2 217932895 217933198 -35323385 + MER44D DNA MER2_type 1 598 -11 248 297 17 8 chr2 217933472 217933590 -35322993 - L2 LINE L2 -1641 1673 1555 880 152 0 36 chr2 217933870 217934008 -35322575 - FLAM_C SINE Alu 0 133 1 2227 106 49 35 chr2 217934082 217934451 -35322132 + THE1C LTR MaLR 1 374 -1 183 42 0 0 chr2 217934833 217934857 -35321726 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 740 263 19 14 chr2 217935019 217935232 -35321351 + MIR SINE MIR 49 262 0 2297 122 3 0 chr2 217935298 217935609 -35320974 + AluSx SINE Alu 1 312 0 550 258 137 14 chr2 217935657 217935939 -35320644 - L1MC/D LINE L1 -385 5736 5416 2498 154 41 32 chr2 217935953 217936420 -35320163 - L1MB8 LINE L1 -5 6173 5703 24 77 0 0 chr2 217936709 217936761 -35319822 + AT_rich Low_complexity Low_complexity 1 52 0 1182 202 191 0 chr2 217936763 217937020 -35319563 - AluSx SINE Alu -6 306 1 44 20 0 0 chr2 217937066 217937117 -35319466 + AT_rich Low_complexity Low_complexity 1 51 0 230 223 71 27 chr2 217937236 217937348 -35319235 + L1MCa LINE L1 1952 2068 -4358 189 107 0 0 chr2 217937350 217937378 -35319205 + (TA)n Simple_repeat Simple_repeat 1 28 0 587 124 0 82 chr2 217937401 217937498 -35319085 - 5S rRNA rRNA -31 90 2 228 299 64 61 chr2 217937668 217937996 -35318587 - L1MC/D LINE L1 -1277 4869 4541 267 173 0 0 chr2 217938037 217938089 -35318494 + GA-rich Low_complexity Low_complexity 2 53 0 335 289 0 0 chr2 217939323 217939406 -35317177 - MIR3 SINE MIR -14 194 112 315 251 87 60 chr2 217939703 217939825 -35316758 + L1ME4a LINE L1 5933 6063 -58 2224 108 7 0 chr2 217939825 217940120 -35316463 + AluSx SINE Alu 1 297 -15 315 251 87 60 chr2 217940120 217940180 -35316403 + L1ME4a LINE L1 6063 6120 -1 7116 52 38 8 chr2 217941147 217942163 -35314420 + L1PA5 LINE L1 5106 6147 -7 3145 65 0 3 chr2 217942181 217942563 -35314020 + L1PA6 LINE L1 5770 6150 -4 2667 150 43 10 chr2 217943087 217943501 -35313082 - MSTA LTR MaLR 0 428 1 1731 160 17 27 chr2 217943560 217943853 -35312730 - AluJb SINE Alu -20 292 3 2277 82 20 0 chr2 217943865 217944159 -35312424 - AluSp SINE Alu -13 300 1 865 314 83 29 chr2 217944348 217945248 -35311335 + L2 LINE L2 2325 3313 0 300 53 0 0 chr2 217945682 217945720 -35310863 + (TG)n Simple_repeat Simple_repeat 2 39 0 317 333 78 25 chr2 217945765 217945969 -35310614 + L1M4 LINE L1 4553 4767 -1379 546 252 78 50 chr2 217945974 217946295 -35310288 + L1M4 LINE L1 4519 4848 -1298 571 252 104 12 chr2 217946392 217946642 -35309941 + L1M4 LINE L1 4890 5162 -984 2185 101 3 26 chr2 217946704 217947012 -35309571 + AluSx SINE Alu 1 301 -11 1008 168 0 24 chr2 217947014 217947181 -35309402 + AluJb SINE Alu 136 298 -14 267 241 0 46 chr2 217947217 217947325 -35309258 + L1M LINE L1 5255 5357 -2451 2016 137 0 3 chr2 217947332 217947625 -35308958 + AluJb SINE Alu 17 308 -4 461 276 244 31 chr2 217947736 217948088 -35308495 - LTR33 LTR ERVL -94 427 1 848 129 0 0 chr2 217948230 217948388 -35308195 + FLAM_C SINE Alu 1 158 0 2063 128 0 0 chr2 217948393 217948711 -35307872 + AluSg SINE Alu 1 318 0 829 262 114 36 chr2 217948792 217949269 -35307314 + MLT1H1 LTR MaLR 3 559 -36 329 284 0 11 chr2 217949294 217949389 -35307194 + MLT1H1-int LTR MaLR 1 94 -1277 327 312 49 41 chr2 217949508 217949650 -35306933 + MLT1H1-int LTR MaLR 383 544 -827 2398 97 0 3 chr2 217949650 217949961 -35306622 + AluSg SINE Alu 1 310 0 327 312 49 41 chr2 217949961 217949979 -35306604 + MLT1H1-int LTR MaLR 544 560 -811 187 292 42 0 chr2 217950268 217950340 -35306243 + MIR SINE MIR 125 199 -63 238 200 60 0 chr2 217950341 217950391 -35306192 - L2 LINE L2 -3 3269 3217 472 255 0 0 chr2 217950391 217950493 -35306090 + MER99 DNA DNA 2 103 -725 2236 107 0 0 chr2 217950859 217951149 -35305434 - AluSg SINE Alu -20 290 1 2310 104 0 7 chr2 217951863 217952162 -35304421 - AluSq SINE Alu -16 297 1 1930 153 7 3 chr2 217952165 217952460 -35304123 - AluJo SINE Alu -16 296 1 285 220 0 0 chr2 217952883 217952933 -35303650 - L2 LINE L2 -56 3257 3208 1030 218 81 106 chr2 217953018 217953318 -35303265 - MLT1J LTR MaLR -4 507 220 1638 142 6 99 chr2 217953318 217953512 -35303071 - AluJo SINE Alu -18 294 140 2309 96 3 7 chr2 217953512 217953814 -35302769 + AluY SINE Alu 1 301 -10 1638 142 6 99 chr2 217953814 217953943 -35302640 - AluJo SINE Alu -172 140 1 1030 218 81 106 chr2 217953943 217954087 -35302496 - MLT1J LTR MaLR -291 220 74 2121 117 0 0 chr2 217954087 217954369 -35302214 + AluSx SINE Alu 1 282 -30 288 0 0 0 chr2 217954372 217954404 -35302179 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 311 353 78 0 chr2 217954469 217954585 -35301998 - L2 LINE L2 -253 3060 2936 2073 142 7 0 chr2 217954741 217955037 -35301546 - AluSx SINE Alu -14 298 1 264 249 200 89 chr2 217955781 217956006 -35300577 + L2 LINE L2 3023 3272 0 811 175 26 7 chr2 217956149 217956303 -35300280 - L1ME3A LINE L1 -7 6163 6007 454 182 0 0 chr2 217956307 217956395 -35300188 - L1ME3A LINE L1 -204 5966 5879 1083 144 72 10 chr2 217956431 217956626 -35299957 - AluSc SINE Alu -9 300 94 670 164 107 19 chr2 217956880 217957039 -35299544 + MIR SINE MIR 54 226 -36 2284 58 17 17 chr2 217957042 217957334 -35299249 + AluY SINE Alu 1 292 -19 944 223 47 81 chr2 217957561 217957983 -35298600 - L1MC4 LINE L1 0 8042 7635 307 267 28 80 chr2 217959729 217959905 -35296678 - L1ME4a LINE L1 0 6121 5955 249 108 0 0 chr2 217961075 217961112 -35295471 + (A)n Simple_repeat Simple_repeat 1 37 0 2015 89 68 21 chr2 217961135 217961416 -35295167 - AluSp SINE Alu -19 294 1 2173 120 7 3 chr2 217961755 217962064 -35294519 + AluSx SINE Alu 1 310 -2 1613 174 0 28 chr2 217962535 217962817 -35293766 + AluJb SINE Alu 24 297 -15 2157 108 6 13 chr2 217963266 217963580 -35293003 - AluSx SINE Alu 0 312 1 493 304 0 0 chr2 217963699 217963811 -35292772 - MER81 DNA DNA 0 114 3 250 255 20 41 chr2 217963811 217963909 -35292674 + MIR SINE MIR 71 166 -96 753 182 0 40 chr2 217964101 217964249 -35292334 + FLAM_C SINE Alu 2 143 0 931 155 15 95 chr2 217964381 217964581 -35292002 + L1MB8 LINE L1 5423 5606 -572 2453 81 0 3 chr2 217964581 217964889 -35291694 + AluY SINE Alu 1 307 -4 2227 90 0 7 chr2 217964909 217965199 -35291384 + AluSg SINE Alu 6 293 -17 1390 180 42 62 chr2 217965199 217965554 -35291029 + L1MB8 LINE L1 5819 6166 -12 1627 183 21 108 chr2 217965623 217966049 -35290534 + L1M4 LINE L1 4604 4992 -1154 1913 165 0 13 chr2 217966050 217966366 -35290217 + AluJb SINE Alu 1 312 0 241 217 0 39 chr2 217966644 217966710 -35289873 + MIR SINE MIR 33 96 -112 569 344 72 0 chr2 217966730 217966980 -35289603 + MER115 DNA AcHobo 1 268 -425 213 339 100 15 chr2 217968566 217968696 -35287887 - L2 LINE L2 -205 3067 2927 282 29 0 0 chr2 217969002 217969037 -35287546 + (TC)n Simple_repeat Simple_repeat 1 35 0 1533 160 55 27 chr2 217969461 217969754 -35286829 + AluJb SINE Alu 1 301 -11 727 174 30 23 chr2 217969825 217969957 -35286626 + FLAM_C SINE Alu 1 133 0 7525 162 33 13 chr2 217969983 217971929 -35284654 - L1PA16 LINE L1 -2 6164 4167 2356 141 22 14 chr2 217971929 217972290 -35284293 + THE1B LTR MaLR 1 364 0 7525 162 33 13 chr2 217972290 217972593 -35283990 - L1PA16 LINE L1 -1999 4167 3871 2127 145 159 8 chr2 217972670 217973042 -35283541 + MSTA LTR MaLR 1 428 0 1419 206 111 57 chr2 217973042 217973473 -35283110 + MER31B LTR ERV1 9 466 0 309 219 0 41 chr2 217973558 217973631 -35282952 - MIR SINE MIR -109 153 84 209 224 0 20 chr2 217974739 217974788 -35281795 + T-rich Low_complexity Low_complexity 2 49 0 21 36 0 0 chr2 217975533 217975561 -35281022 + AT_rich Low_complexity Low_complexity 1 28 0 247 148 19 19 chr2 217975679 217975733 -35280850 + L1ME4a LINE L1 5960 6013 -108 523 287 77 34 chr2 217975813 217976022 -35280561 + LTR16A LTR ERVL 83 300 -150 1811 330 38 6 chr2 217976025 217976738 -35279845 + ERVL LTR ERVL 3604 4339 -1425 200 220 77 22 chr2 217976879 217976970 -35279613 - L2 LINE L2 -21 3292 3197 2209 129 0 0 chr2 217977037 217977340 -35279243 - AluJb SINE Alu -9 303 1 2409 97 0 0 chr2 217978279 217978587 -35277996 - AluSx SINE Alu -4 308 1 924 87 0 32 chr2 217978608 217978769 -35277814 + AluSc SINE Alu 160 316 0 2331 88 27 0 chr2 217979113 217979410 -35277173 + AluSg SINE Alu 1 305 -5 1051 172 0 0 chr2 217979419 217979582 -35277001 + AluJb SINE Alu 130 292 -20 2535 73 34 112 chr2 217979621 217979678 -35276905 - MER4A LTR ERV1 -1 663 603 2357 75 20 3 chr2 217979678 217979971 -35276612 + AluSp SINE Alu 1 298 -15 2535 73 34 112 chr2 217979971 217980188 -35276395 - MER4A LTR ERV1 -61 603 433 2036 114 7 17 chr2 217980188 217980485 -35276098 + AluSq SINE Alu 1 294 -19 2535 73 34 112 chr2 217980485 217980646 -35275937 - MER4A LTR ERV1 -231 433 261 703 102 0 10 chr2 217980646 217980744 -35275839 - MER4A LTR ERV1 -566 98 2 286 143 41 0 chr2 217982039 217982088 -35274495 + AluSg/x SINE Alu 118 168 -132 1463 145 0 9 chr2 217982103 217982317 -35274266 - AluJo SINE Alu -100 212 1 2373 100 3 0 chr2 217982347 217982648 -35273935 - AluSx SINE Alu -10 302 1 548 236 0 0 chr2 217982651 217982757 -35273826 + MER94 DNA DNA 29 134 0 180 0 0 0 chr2 217982758 217982778 -35273805 + (TG)n Simple_repeat Simple_repeat 1 20 0 604 129 53 8 chr2 217982778 217982910 -35273673 + Tigger3(Golem) DNA MER2_type 2464 2601 -428 1742 108 22 32 chr2 217983226 217983503 -35273080 + Tigger3b DNA MER2_type 299 572 -659 902 109 0 54 chr2 217983505 217983582 -35273001 + FLAM_C SINE Alu 1 68 -244 3202 53 5 2 chr2 217983582 217983979 -35272604 - MER48 LTR ERV1 0 398 1 902 109 0 54 chr2 217983979 217984048 -35272535 + FLAM_C SINE Alu 68 139 -173 2555 89 59 45 chr2 217984048 217984383 -35272200 + Tigger3b DNA MER2_type 598 927 -2101 2350 87 0 7 chr2 217984383 217984683 -35271900 - AluY SINE Alu -13 298 1 2555 89 59 45 chr2 217984683 217984720 -35271863 + Tigger3b DNA MER2_type 927 962 -2066 4708 6 0 2 chr2 217984720 217985229 -35271354 + MER9 LTR ERVK 1 508 -3 2555 89 59 45 chr2 217985229 217985383 -35271200 + Tigger3b DNA MER2_type 962 1227 -4 1945 152 0 3 chr2 217985414 217985716 -35270867 + AluJo SINE Alu 1 301 -11 220 275 12 38 chr2 217986417 217986497 -35270086 - MER5B DNA MER1_type -2 176 99 1694 256 19 2 chr2 217986693 217987114 -35269469 - MER90 LTR ERV1 -147 428 1 2403 97 0 0 chr2 217989049 217989349 -35267234 + AluSq SINE Alu 1 300 -13 2427 48 41 3 chr2 217989349 217989643 -35266940 + AluY SINE Alu 1 305 -6 372 363 31 67 chr2 217989826 217990245 -35266338 - L2 LINE L2 -18 3254 2851 264 325 73 39 chr2 217990304 217990510 -35266073 - L2 LINE L2 -556 2758 2546 2365 73 0 26 chr2 217990724 217991027 -35265556 + AluY SINE Alu 1 295 -16 1520 182 24 27 chr2 217991080 217991377 -35265206 + AluJb SINE Alu 1 296 -16 2178 126 0 0 chr2 217991528 217991848 -35264735 + AluSx SINE Alu 1 312 0 273 292 58 42 chr2 217991848 217991968 -35264615 + MER5A DNA MER1_type 66 187 -2 237 304 179 14 chr2 217992123 217992200 -35264383 - MIR SINE MIR -2 260 197 2297 256 16 2 chr2 217992200 217992767 -35263816 - MER90 LTR ERV1 0 575 1 237 304 179 14 chr2 217992767 217992896 -35263687 - MIR SINE MIR -65 197 20 3206 143 8 0 chr2 217995974 217996471 -35260112 + L1PA15 LINE L1 5664 6164 -1 545 282 87 26 chr2 217996834 217997143 -35259440 - L1MC4a LINE L1 -1874 5934 5607 2106 138 0 3 chr2 217997143 217997454 -35259129 - AluJb SINE Alu -2 310 1 93 76 0 13 chr2 218000001 218000239 -35256344 + AT_rich Low_complexity Low_complexity 1 235 0 350 178 74 6 chr2 218000241 218000404 -35256179 + (TA)n Simple_repeat Simple_repeat 2 175 0 1308 140 0 0 chr2 218000405 218000598 -35255985 - AluSg/x SINE Alu 0 310 118 1795 157 41 0 chr2 218000614 218000908 -35255675 - AluSx SINE Alu -1 311 6 29 0 0 0 chr2 218000924 218000953 -35255630 + AT_rich Low_complexity Low_complexity 1 29 0 297 177 25 57 chr2 218000965 218001123 -35255460 + (TATAA)n Simple_repeat Simple_repeat 1 153 0 45 45 0 0 chr2 218001140 218001206 -35255377 + AT_rich Low_complexity Low_complexity 1 66 0 312 248 78 50 chr2 218002514 218002655 -35253928 + MLT1L LTR MaLR 467 611 -4 266 309 12 0 chr2 218002730 218002755 -35253828 + GA-rich Low_complexity Low_complexity 3 26 -61 1441 99 9 18 chr2 218002755 218002978 -35253605 + L1PA13 LINE L1 5943 6163 0 266 309 12 0 chr2 218002978 218003036 -35253547 + GA-rich Low_complexity Low_complexity 26 87 0 199 269 258 0 chr2 218003093 218003186 -35253397 - MIR3 SINE MIR -43 165 49 2440 90 0 0 chr2 218003237 218003536 -35253047 + AluSx SINE Alu 1 299 -13 560 216 52 26 chr2 218004199 218004352 -35252231 - MLT1L LTR MaLR -13 602 446 2424 80 0 10 chr2 218004719 218005030 -35251553 - AluY SINE Alu -3 308 1 2006 111 40 14 chr2 218005034 218005331 -35251252 - AluSx SINE Alu -7 305 1 1986 175 75 34 chr2 218005623 218006064 -35250519 - LTR2B LTR ERV1 0 490 32 4815 74 10 0 chr2 218006083 218006693 -35249890 - Harlequin LTR ERV1 0 6896 6281 * 16038 45 15 2 chr2 218006690 218008593 -35247990 - Harlequin LTR ERV1 -2278 4618 2691 1119 195 44 0 chr2 218008593 218008819 -35247764 - L1MB3 LINE L1 -148 6035 5800 1185 197 39 4 chr2 218008824 218009083 -35247500 - L1MB3 LINE L1 -1431 4715 4448 840 264 45 10 chr2 218009098 218009390 -35247193 - L1ME4a LINE L1 -237 5884 5583 928 189 18 53 chr2 218009636 218009863 -35246720 + MER20 DNA MER1_type 1 219 0 21 0 0 0 chr2 218010805 218010826 -35245757 + GC_rich Low_complexity Low_complexity 1 21 0 192 77 0 0 chr2 218010945 218010971 -35245612 + (CCTTG)n Simple_repeat Simple_repeat 5 30 0 192 270 16 0 chr2 218011569 218011632 -35244951 + MIR SINE MIR 129 192 -70 318 148 0 0 chr2 218012048 218012102 -35244481 + (TA)n Simple_repeat Simple_repeat 2 55 0 231 36 0 0 chr2 218012102 218012130 -35244453 + (GA)n Simple_repeat Simple_repeat 2 29 0 1670 108 0 0 chr2 218012248 218012462 -35244121 - AluSg/x SINE Alu -14 296 83 674 37 0 0 chr2 218012462 218012543 -35244040 + L1PA4 LINE L1 6002 6082 -73 2112 131 16 0 chr2 218012657 218012962 -35243621 + AluSx SINE Alu 1 310 -2 2421 71 7 0 chr2 218013076 218013373 -35243210 + AluY SINE Alu 1 299 -12 1669 165 35 21 chr2 218013377 218013662 -35242921 - AluJo SINE Alu -23 289 1 2609 56 0 0 chr2 218013992 218014294 -35242289 + AluY SINE Alu 2 303 -8 439 291 45 0 chr2 218014401 218014535 -35242048 - MER91C DNA MER1_type 0 140 1 1473 66 0 22 chr2 218014680 218014863 -35241720 - AluY SINE Alu -132 179 1 714 197 94 22 chr2 218015396 218015619 -35240964 + MIR SINE MIR 17 255 -7 205 114 23 45 chr2 218015693 218015737 -35240846 + MER5A DNA MER1_type 40 82 -107 2112 137 0 13 chr2 218015787 218016094 -35240489 - AluJb SINE Alu -9 303 1 199 296 114 0 chr2 218016151 218016239 -35240344 - L2 LINE L2 -25 3247 3150 539 250 175 13 chr2 218016634 218016862 -35239721 - LTR16A1 LTR ERVL -1 456 192 357 205 82 33 chr2 218017045 218017167 -35239416 + MIR SINE MIR 135 262 0 2138 104 7 0 chr2 218017463 218017750 -35238833 - AluSg SINE Alu -21 289 1 2591 63 0 0 chr2 218017964 218018265 -35238318 + AluY SINE Alu 3 303 -8 1268 280 109 10 chr2 218018510 218019014 -35237569 - L2 LINE L2 -652 2662 2109 700 58 0 0 chr2 218019090 218019176 -35237407 + AluSp/q SINE Alu 216 301 -12 22 35 0 0 chr2 218019211 218019240 -35237343 + AT_rich Low_complexity Low_complexity 1 29 0 224 234 149 57 chr2 218019592 218019733 -35236850 + MER5A DNA MER1_type 36 189 0 445 190 10 20 chr2 218019747 218019847 -35236736 + MER5A DNA MER1_type 7 105 -84 272 0 79 0 chr2 218019848 218019886 -35236697 + T-rich Low_complexity Low_complexity 5 45 0 1660 155 25 22 chr2 218019886 218020164 -35236419 - AluJo SINE Alu -32 280 2 333 146 0 0 chr2 218020164 218020212 -35236371 - Alu SINE Alu -254 48 1 201 200 55 18 chr2 218020212 218020267 -35236316 + MER5B DNA MER1_type 35 91 -87 2031 81 7 15 chr2 218020272 218020543 -35236040 - AluSq SINE Alu 0 313 45 2100 133 7 3 chr2 218021602 218021911 -35234672 + AluSx SINE Alu 1 310 -2 905 154 0 0 chr2 218022378 218022521 -35234062 + FLAM_C SINE Alu 1 143 0 2241 119 0 16 chr2 218022646 218022964 -35233619 + AluSq SINE Alu 1 313 0 2872 118 7 24 chr2 218022964 218023414 -35233169 + MER65A LTR ERV1 4 445 0 3252 103 29 17 chr2 218023612 218023855 -35232728 + L1MA2 LINE L1 5779 6018 -286 2881 121 7 32 chr2 218023855 218024243 -35232340 + MSTA LTR MaLR 1 380 -48 2082 135 4 0 chr2 218024243 218024567 -35232016 + AluSx SINE Alu 1 325 0 2881 121 7 32 chr2 218024567 218024615 -35231968 + MSTA LTR MaLR 380 428 0 3252 103 29 17 chr2 218024615 218024887 -35231696 + L1MA2 LINE L1 6018 6300 -4 25 0 0 0 chr2 218024887 218024912 -35231671 + AT_rich Low_complexity Low_complexity 1 25 0 1216 114 0 0 chr2 218025158 218025325 -35231258 - AluSg/x SINE Alu -6 304 138 1402 113 0 0 chr2 218025445 218025639 -35230944 + AluSg/x SINE Alu 117 310 0 2049 146 3 0 chr2 218025661 218025963 -35230620 - AluSx SINE Alu -9 303 1 22 0 0 0 chr2 218025966 218025988 -35230595 + AT_rich Low_complexity Low_complexity 1 22 0 313 211 58 115 chr2 218026257 218026413 -35230170 + L1ME4a LINE L1 5935 6081 -40 2475 28 42 0 chr2 218026479 218026766 -35229817 + AluY SINE Alu 1 299 -12 234 0 0 0 chr2 218027357 218027383 -35229200 + (TG)n Simple_repeat Simple_repeat 1 26 0 2153 106 58 0 chr2 218027537 218027830 -35228753 + AluSg SINE Alu 1 310 0 23 0 0 0 chr2 218028139 218028162 -35228421 + AT_rich Low_complexity Low_complexity 1 23 0 1104 246 8 4 chr2 218028718 218028966 -35227617 - MIR SINE MIR 0 262 14 1508 173 18 7 chr2 218029246 218029400 -35227183 - AluJb SINE Alu -25 287 136 207 0 0 0 chr2 218029400 218029423 -35227160 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2355 84 0 0 chr2 218029423 218029708 -35226875 - AluSq SINE Alu -28 285 1 1508 173 18 7 chr2 218029708 218029824 -35226759 - AluJb SINE Alu -175 137 13 715 264 202 17 chr2 218030600 218030922 -35225661 + L1ME3 LINE L1 5323 5584 -578 2296 107 0 10 chr2 218030922 218031232 -35225351 + AluSq SINE Alu 1 307 -6 715 264 202 17 chr2 218031232 218031430 -35225153 + L1ME3 LINE L1 5584 5935 -227 2252 98 0 3 chr2 218031430 218031736 -35224847 + AluY SINE Alu 1 305 -6 1631 178 25 4 chr2 218032053 218032334 -35224249 - AluJb SINE Alu -25 287 1 428 262 37 0 chr2 218032701 218032808 -35223775 - MIR SINE MIR -115 147 37 1893 121 3 46 chr2 218033086 218033391 -35223192 + AluSx SINE Alu 1 292 -20 873 140 57 32 chr2 218034207 218034269 -35222314 + MER20 DNA MER1_type 1 60 -159 2268 89 0 0 chr2 218034269 218034562 -35222021 - AluSx SINE Alu -19 293 1 873 140 57 32 chr2 218034562 218034656 -35221927 + MER20 DNA MER1_type 60 161 -58 581 299 99 5 chr2 218034697 218034908 -35221675 - MIR SINE MIR -15 247 17 229 302 75 0 chr2 218034921 218035027 -35221556 - L1MC4 LINE L1 -1315 6727 6614 201 211 0 0 chr2 218035030 218035082 -35221501 + (TA)n Simple_repeat Simple_repeat 1 52 0 248 250 71 0 chr2 218035083 218035167 -35221416 + L1MC4 LINE L1 6614 6703 -1339 320 110 66 11 chr2 218035210 218035301 -35221282 + (TA)n Simple_repeat Simple_repeat 1 96 0 2332 103 3 0 chr2 218035346 218035656 -35220927 + AluSq SINE Alu 1 311 -2 1941 120 33 4 chr2 218035887 218036204 -35220379 - AluSx SINE Alu 0 325 1 809 136 0 38 chr2 218036718 218036840 -35219743 + AluJo/FLAM SINE Alu 1 119 -183 2157 108 0 13 chr2 218036840 218037145 -35219438 - AluSq SINE Alu -12 301 1 275 221 81 23 chr2 218037172 218037258 -35219325 + L2 LINE L2 3182 3272 0 423 346 49 22 chr2 218037733 218037918 -35218665 - MIR3 SINE MIR -3 205 16 440 172 121 69 chr2 218037950 218038066 -35218517 + FLAM_A SINE Alu 1 122 -11 1965 143 7 3 chr2 218038260 218038553 -35218030 + AluSx SINE Alu 6 299 -13 469 195 50 94 chr2 218039959 218040118 -35216465 + MLT1K LTR MaLR 411 562 -26 1915 128 35 17 chr2 218040498 218040787 -35215796 - AluSx SINE Alu -18 294 1 356 353 0 0 chr2 218041436 218041538 -35215045 + MIR SINE MIR 28 129 -79 263 253 0 11 chr2 218044203 218044294 -35212289 + (TA)n Simple_repeat Simple_repeat 2 91 0 1323 192 44 106 chr2 218045783 218046171 -35210412 + MLT2D LTR ERVL 1 361 -53 378 0 0 0 chr2 218046171 218046213 -35210370 + (TG)n Simple_repeat Simple_repeat 2 43 0 1323 192 44 106 chr2 218046213 218046257 -35210326 + MLT2D LTR ERVL 361 406 -8 2261 93 0 17 chr2 218046534 218046834 -35209749 - AluSc SINE Alu -14 295 1 192 326 122 7 chr2 218047032 218047179 -35209404 + MIR3 SINE MIR 42 205 -3 334 294 74 8 chr2 218047504 218047659 -35208924 + MIR3 SINE MIR 39 204 -4 1431 185 54 80 chr2 218048605 218049065 -35207518 - LTR7 LTR ERV1 -2 448 1 1175 193 115 6 chr2 218049372 218049694 -35206889 - MER69 DNA AcHobo -10 2516 2160 2315 71 4 0 chr2 218049700 218050011 -35206572 - AluSp SINE Alu 0 314 3 917 134 0 40 chr2 218050015 218050164 -35206419 - FLAM_C SINE Alu 0 143 1 1636 207 0 3 chr2 218050212 218050553 -35206030 + AluJb SINE Alu 1 340 0 2240 138 41 84 chr2 218050935 218051400 -35205183 + MER41B LTR ERV1 131 575 -60 848 114 0 94 chr2 218051765 218051859 -35204724 - MER57-int LTR ERV1 -4583 2954 2877 2272 47 33 36 chr2 218051859 218052160 -35204423 + AluY SINE Alu 1 300 -11 848 114 0 94 chr2 218052160 218052214 -35204369 - MER57-int LTR ERV1 -4660 2877 2820 * 3663 155 52 7 chr2 218052210 218052886 -35203697 + MER41B-int LTR ERV1 5085 5790 -541 508 171 62 96 chr2 218052906 218053052 -35203531 + MER41B-int LTR ERV1 5914 6054 -277 719 264 71 31 chr2 218053109 218053363 -35203220 + MER41B-int LTR ERV1 6410 6673 -3 2335 178 45 38 chr2 218053363 218053462 -35203121 + MER41B LTR ERV1 111 208 -346 726 199 122 0 chr2 218053462 218053618 -35202965 + FAM SINE Alu 1 175 0 2335 178 45 38 chr2 218053618 218054029 -35202554 + MER41B LTR ERV1 208 540 -14 2927 0 0 0 chr2 218054528 218054837 -35201746 - AluYa5 SINE Alu -2 309 1 348 281 126 18 chr2 218054916 218055083 -35201500 + MIR SINE MIR 78 262 0 22 35 0 0 chr2 218055203 218055232 -35201351 + AT_rich Low_complexity Low_complexity 1 29 0 897 165 0 0 chr2 218055232 218055359 -35201224 - FLAM_C SINE Alu -5 128 2 1107 221 88 42 chr2 218055505 218055916 -35200667 - MER39 LTR ERV1 -3 687 76 1370 205 54 79 chr2 218056056 218056585 -35199998 + MER39 LTR ERV1 5 683 -24 646 226 123 0 chr2 218056890 218057045 -35199538 + MER5B DNA MER1_type 3 176 -2 1672 144 11 15 chr2 218057134 218057398 -35199185 - AluJo SINE Alu -15 297 35 291 114 0 0 chr2 218057418 218057462 -35199121 + (TTCC)n Simple_repeat Simple_repeat 1 44 0 1199 116 52 6 chr2 218057462 218057635 -35198948 - AluSg/x SINE Alu -22 288 108 5163 57 2 7 chr2 218057636 218058251 -35198332 + LTR5 LTR ERVK 1 612 -357 2257 99 7 0 chr2 218058389 218058682 -35197901 - AluSq SINE Alu -18 295 1 38 39 0 0 chr2 218058692 218058744 -35197839 + AT_rich Low_complexity Low_complexity 1 52 0 2357 61 0 0 chr2 218058918 218059196 -35197387 - AluY SINE Alu -33 278 1 34 0 0 0 chr2 218059925 218059959 -35196624 + AT_rich Low_complexity Low_complexity 1 34 0 1923 164 0 0 chr2 218059962 218060248 -35196335 - AluSx SINE Alu -26 286 1 27 49 0 0 chr2 218060753 218060794 -35195789 + AT_rich Low_complexity Low_complexity 1 41 0 2211 99 27 0 chr2 218061026 218061319 -35195264 + AluSx SINE Alu 1 301 -11 201 231 19 19 chr2 218061435 218061487 -35195096 + MIR3 SINE MIR 138 189 -19 2619 122 8 0 chr2 218062213 218062583 -35194000 + LOR1a LTR ERV1 1 373 -124 2518 119 8 16 chr2 218062587 218062972 -35193611 - MER31A LTR ERV1 -103 382 1 670 215 101 63 chr2 218062972 218063209 -35193374 - L1MC4 LINE L1 -590 7452 7207 251 211 0 0 chr2 218063746 218063784 -35192799 - AluJ/monomer SINE Alu -264 39 2 2069 111 42 0 chr2 218063968 218064256 -35192327 + AluSq SINE Alu 1 300 -13 316 293 62 103 chr2 218065212 218065470 -35191113 + L2 LINE L2 2423 2659 -655 1993 118 0 0 chr2 218065470 218065732 -35190851 - AluSg SINE Alu -12 298 37 316 293 62 103 chr2 218065732 218065889 -35190694 + L2 LINE L2 2659 2821 -493 2481 68 0 0 chr2 218066872 218067166 -35189417 - AluY SINE Alu -16 295 2 839 177 53 84 chr2 218067567 218067793 -35188790 + MER58A DNA MER1_type 6 224 0 484 221 147 7 chr2 218069088 218069224 -35187359 + MIR SINE MIR 50 204 -58 22 35 0 0 chr2 218069227 218069256 -35187327 + AT_rich Low_complexity Low_complexity 1 29 0 1805 149 10 36 chr2 218069938 218070246 -35186337 - AluSx SINE Alu -12 300 1 271 274 142 34 chr2 218070482 218070611 -35185972 + MIR3 SINE MIR 29 175 -33 234 301 261 13 chr2 218070959 218071112 -35185471 + MIR SINE MIR 2 192 -70 2602 51 0 0 chr2 218071467 218071778 -35184805 - AluY SINE Alu 0 311 1 2919 117 24 12 chr2 218072663 218073083 -35183500 + MSTB LTR MaLR 1 425 -1 298 291 35 0 chr2 218074628 218074714 -35181869 - MIR SINE MIR -25 237 149 26 0 0 0 chr2 218075341 218075367 -35181216 + AT_rich Low_complexity Low_complexity 1 26 0 2336 76 7 20 chr2 218075373 218075675 -35180908 + AluSg SINE Alu 1 298 -12 579 215 79 11 chr2 218076901 218077041 -35179542 - MER5A DNA MER1_type -3 186 27 426 239 200 0 chr2 218077148 218077278 -35179305 + MIR SINE MIR 52 207 -55 2289 67 0 0 chr2 218077491 218077776 -35178807 - AluY SINE Alu -21 290 6 1457 129 9 5 chr2 218077977 218078201 -35178382 - AluSg/x SINE Alu -2 310 86 40 0 0 0 chr2 218078248 218078288 -35178295 + AT_rich Low_complexity Low_complexity 1 40 0 767 194 0 0 chr2 218078433 218078567 -35178016 - FLAM_A SINE Alu -3 139 6 331 232 12 12 chr2 218078802 218078884 -35177699 + L2 LINE L2 3232 3313 0 1665 153 6 58 chr2 218079032 218079180 -35177403 + AluSx SINE Alu 1 126 -186 2072 106 0 26 chr2 218079180 218079491 -35177092 + AluSq SINE Alu 1 303 -10 1665 153 6 58 chr2 218079491 218079655 -35176928 + AluSx SINE Alu 126 297 -15 2126 115 7 0 chr2 218079658 218079963 -35176620 + AluSq SINE Alu 1 307 -6 4706 123 96 20 chr2 218080738 218081502 -35175081 - LTR12 LTR ERV1 0 826 5 2173 182 81 29 chr2 218081518 218082096 -35174487 - pTR5 LTR ERV1 -1093 1345 738 2182 111 0 0 chr2 218082807 218083113 -35173470 - AluSg SINE Alu -3 307 2 2479 51 0 3 chr2 218083787 218084098 -35172485 + AluY SINE Alu 1 310 -1 297 317 84 7 chr2 218084100 218084242 -35172341 - L1ME3A LINE L1 -30 6140 5988 666 158 8 45 chr2 218085016 218085149 -35171434 + MER50 LTR ERV1 7 134 -600 688 116 0 0 chr2 218085151 218085246 -35171337 + AluSx SINE Alu 2 96 -216 2637 99 99 5 chr2 218085246 218085651 -35170932 + LTR7 LTR ERV1 6 448 -2 26796 102 22 17 chr2 218085653 218089626 -35166957 + HERVH LTR ERV1 1 3993 -3720 3069 142 0 2 chr2 218089628 218090246 -35166337 + HERVH LTR ERV1 4488 5149 -2564 1382 135 23 0 chr2 218090247 218090462 -35166121 + HERVH LTR ERV1 5600 5819 -1894 * 2345 98 53 16 chr2 218090460 218090838 -35165745 + HERVH LTR ERV1 7322 7713 0 2648 82 99 17 chr2 218090838 218091252 -35165331 + LTR7 LTR ERV1 1 448 -2 812 160 148 12 chr2 218091255 218091472 -35165111 + AluSx SINE Alu 91 330 0 3615 138 39 4 chr2 218091472 218092035 -35164548 + MER50 LTR ERV1 129 711 -23 1726 160 21 0 chr2 218092130 218092412 -35164171 - AluJb SINE Alu -22 290 3 829 156 0 0 chr2 218092833 218092955 -35163628 + FLAM_C SINE Alu 1 122 -11 315 0 0 0 chr2 218093526 218093561 -35163022 + (TG)n Simple_repeat Simple_repeat 2 36 0 1019 84 0 0 chr2 218093656 218093787 -35162796 - AluSq/x SINE Alu -181 131 1 2291 93 6 0 chr2 218094272 218094583 -35162000 - AluSp SINE Alu 0 313 1 2279 66 23 0 chr2 218095175 218095477 -35161106 - AluYa5 SINE Alu -2 309 1 382 260 226 0 chr2 218095520 218095666 -35160917 - MIR SINE MIR 0 262 84 645 252 198 15 chr2 218095673 218096002 -35160581 - MLT1G3 LTR MaLR 0 555 129 1126 196 78 100 chr2 218096016 218096465 -35160118 - L1MD1 LINE L1 -10 6232 5794 677 210 155 17 chr2 218096473 218096654 -35159929 - MLT1G1 LTR MaLR -389 206 1 1297 87 0 6 chr2 218096684 218096877 -35159706 + AluSg/x SINE Alu 112 303 0 2168 79 7 0 chr2 218097550 218097840 -35158743 + AluSc SINE Alu 2 293 -16 207 105 26 0 chr2 218099277 218099315 -35157268 + T-rich Low_complexity Low_complexity 6 44 0 323 372 16 11 chr2 218099397 218099585 -35156998 + L1ME4a LINE L1 5754 5942 -179 1713 161 0 7 chr2 218099594 218099886 -35156697 + AluJo SINE Alu 1 290 -22 2275 46 4 0 chr2 218099919 218100227 -35156356 - AluY SINE Alu 0 309 1 566 311 43 0 chr2 218100778 218100942 -35155641 - MIR SINE MIR -36 226 56 2176 105 0 0 chr2 218101578 218101874 -35154709 + AluSq SINE Alu 6 301 -12 2074 104 4 0 chr2 218102108 218102413 -35154170 + AluSg SINE Alu 1 306 0 946 238 57 20 chr2 218102656 218102955 -35153628 - L1ME3A LINE L1 -5 6165 5856 1901 138 23 0 chr2 218103524 218103829 -35152754 - AluSx SINE Alu 0 312 1 1088 187 13 57 chr2 218103919 218104219 -35152364 - AluJb SINE Alu -17 295 9 38 0 0 0 chr2 218104349 218104387 -35152196 + GC_rich Low_complexity Low_complexity 1 38 0 631 191 0 26 chr2 218104525 218104640 -35151943 - FRAM SINE Alu -65 111 1 723 197 8 0 chr2 218104719 218104841 -35151742 - FLAM_C SINE Alu -19 124 2 418 231 157 9 chr2 218104889 218104997 -35151586 - MER5B DNA MER1_type -2 176 53 233 234 0 0 chr2 218105040 218105087 -35151496 - MER5B DNA MER1_type -129 49 3 236 111 352 0 chr2 218105093 218105147 -35151436 + MER116 DNA Mariner 4 76 -4 1043 121 12 6 chr2 218106233 218106398 -35150185 - AluSg/x SINE Alu -15 297 132 731 185 0 15 chr2 218108287 218108422 -35148161 - FLAM_A SINE Alu 0 133 1 335 317 149 12 chr2 218108782 218108943 -35147640 - MIR SINE MIR -17 245 63 192 40 0 0 chr2 218111341 218111366 -35145217 + (TCCCC)n Simple_repeat Simple_repeat 4 28 0 1622 136 16 67 chr2 218112729 218113045 -35143538 - AluJb SINE Alu -10 302 3 1717 106 68 0 chr2 218113257 218113548 -35143035 - AluSx SINE Alu 0 309 1 22 0 0 0 chr2 218113551 218113573 -35143010 + AT_rich Low_complexity Low_complexity 1 22 0 3683 182 31 51 chr2 218113791 218114778 -35141805 - LTR5 LTR ERVK 0 969 2 1339 183 49 25 chr2 218115202 218115322 -35141261 + AluJo SINE Alu 1 117 -195 243 0 0 0 chr2 218115322 218115349 -35141234 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1339 183 49 25 chr2 218115349 218115512 -35141071 + AluJo SINE Alu 117 291 -21 2343 72 0 13 chr2 218115759 218116064 -35140519 - AluY SINE Alu -10 301 1 763 319 80 47 chr2 218116371 218117120 -35139463 - L2 LINE L2 -787 2527 1754 2134 102 0 0 chr2 218117124 218117417 -35139166 - AluSx SINE Alu -18 294 2 475 322 9 9 chr2 218117636 218117826 -35138757 - L1ME LINE L1 -457 5664 5475 562 189 94 0 chr2 218117840 218117946 -35138637 + L1MC4 LINE L1 6798 6913 -1129 * 4540 179 29 65 chr2 218117943 218118205 -35138378 + L1MA7 LINE L1 3956 4226 -2065 2172 105 0 0 chr2 218118205 218118501 -35138082 - AluSg SINE Alu -13 297 2 4540 179 29 65 chr2 218118501 218118797 -35137786 + L1MA7 LINE L1 4226 4531 -1760 1987 86 10 23 chr2 218118797 218119101 -35137482 + AluSg SINE Alu 9 308 -2 4540 179 29 65 chr2 218119101 218120373 -35136210 + L1MA7 LINE L1 4531 5671 -620 836 145 0 0 chr2 218120402 218120526 -35136057 - FLAM_C SINE Alu -19 124 1 2103 136 25 20 chr2 218120527 218120647 -35135936 + L1MA7 LINE L1 5662 5780 -351 1630 125 19 70 chr2 218120647 218120960 -35135623 + AluSg SINE Alu 1 297 -13 2103 136 25 20 chr2 218120960 218121215 -35135368 + L1MA7 LINE L1 5780 6038 -93 872 232 141 11 chr2 218121189 218121543 -35135040 + L1MC4 LINE L1 6894 7293 -749 * 183 250 0 0 chr2 218121673 218121709 -35134874 + L2 LINE L2 3149 3184 -88 28 0 0 0 chr2 218122018 218122046 -35134537 + AT_rich Low_complexity Low_complexity 1 28 0 445 337 35 6 chr2 218122796 218122968 -35133615 - MIR SINE MIR -23 239 63 206 241 0 48 chr2 218123456 218123539 -35133044 + G-rich Low_complexity Low_complexity 1 79 0 1072 103 25 25 chr2 218124611 218124814 -35131769 - AluSg/x SINE Alu -8 302 100 521 299 0 0 chr2 218124855 218125032 -35131551 + G-rich Low_complexity Low_complexity 1 177 0 2080 84 10 10 chr2 218125493 218125791 -35130792 - AluSx SINE Alu -8 304 7 794 177 0 0 chr2 218125792 218125933 -35130650 - AluSg/x SINE Alu -35 275 135 858 103 0 89 chr2 218126421 218126567 -35130016 - FLAM_C SINE Alu 0 133 1 24 0 0 0 chr2 218126569 218126593 -35129990 + AT_rich Low_complexity Low_complexity 1 24 0 275 191 16 0 chr2 218126722 218126785 -35129798 + CT-rich Low_complexity Low_complexity 1 64 0 22 0 0 0 chr2 218126844 218126866 -35129717 + AT_rich Low_complexity Low_complexity 1 22 0 225 276 51 31 chr2 218126966 218127064 -35129519 + MIR SINE MIR 44 143 -65 2350 83 7 3 chr2 218128028 218128330 -35128253 - AluSq SINE Alu -8 305 3 25 51 0 0 chr2 218128698 218128737 -35127846 + AT_rich Low_complexity Low_complexity 1 39 0 2305 96 0 7 chr2 218128742 218129044 -35127539 + AluSx SINE Alu 1 300 -12 231 71 0 0 chr2 218129756 218129784 -35126799 + tRNA-His-CAC tRNA tRNA 2 29 -46 2439 75 0 3 chr2 218129943 218130249 -35126334 + AluY SINE Alu 1 305 -6 1287 152 51 4 chr2 218130788 218131044 -35125539 - L1MC3 LINE L1 -6 7779 7512 379 265 17 51 chr2 218131061 218131178 -35125405 - L2 LINE L2 -8 3305 3193 728 166 0 53 chr2 218131306 218131457 -35125126 + FLAM_C SINE Alu 1 143 0 200 267 0 0 chr2 218133129 218133174 -35123409 + MIR SINE MIR 66 110 -152 1114 219 150 29 chr2 218134957 218135477 -35121106 - L1M4 LINE L1 -978 5168 4586 5606 149 26 5 chr2 218136412 218137795 -35118788 - L1PA16 LINE L1 -9 6157 4750 922 177 0 11 chr2 218137797 218137978 -35118605 + L1PA16 LINE L1 4591 4769 -1377 552 164 10 19 chr2 218138155 218138259 -35118324 - MLT1C LTR MaLR 0 467 365 6862 244 43 12 chr2 218138259 218140350 -35116233 - ERVL-C1 LTR ERVL -3536 2228 2 1811 163 55 42 chr2 218140351 218140738 -35115845 - MLT2C1 LTR ERVL 0 554 6 2062 126 0 77 chr2 218140753 218141117 -35115466 - MER1B DNA MER1_type -1 336 1 233 331 161 8 chr2 218141268 218141392 -35115191 + L2 LINE L2 3125 3267 -5 1723 155 3 29 chr2 218141562 218141872 -35114711 - AluJb SINE Alu -10 302 1 2279 100 7 0 chr2 218142250 218142549 -35114034 - AluSq SINE Alu -12 301 1 593 151 7 130 chr2 218142827 218142973 -35113610 - FLAM_C SINE Alu -12 131 4 2310 92 3 0 chr2 218143055 218143383 -35113200 - AluSq SINE Alu 0 329 1 180 0 0 0 chr2 218143685 218143705 -35112878 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 457 214 45 18 chr2 218144108 218144220 -35112363 + L2 LINE L2 3190 3304 -9 1574 136 70 15 chr2 218144540 218144812 -35111771 - AluJo SINE Alu -25 287 1 303 296 102 51 chr2 218144934 218145150 -35111433 + L1ME3A LINE L1 5761 5987 -183 2347 95 0 13 chr2 218145247 218145562 -35111021 - AluSq SINE Alu -2 311 1 1959 138 24 0 chr2 218145585 218145882 -35110701 - AluSx SINE Alu -8 304 1 25 0 0 0 chr2 218145945 218145970 -35110613 + AT_rich Low_complexity Low_complexity 1 25 0 571 307 52 5 chr2 218146143 218146355 -35110228 - MIR SINE MIR -20 242 21 366 274 39 56 chr2 218147052 218147259 -35109324 - L2 LINE L2 -297 3016 2736 320 295 33 0 chr2 218147283 218147405 -35109178 - L1MC4 LINE L1 -3 8039 7914 2313 94 3 3 chr2 218147411 218147718 -35108865 - AluY SINE Alu -4 307 1 755 179 0 0 chr2 218147739 218147856 -35108727 - FLAM_C SINE Alu -16 117 1 320 188 0 50 chr2 218147856 218147936 -35108647 - L1MC4 LINE L1 -115 7927 7852 4768 170 19 3 chr2 218147951 218148821 -35107762 - L1MC1 LINE L1 -13 6600 5717 7577 194 100 41 chr2 218148824 218150699 -35105884 - L1MC1 LINE L1 -1821 4605 2842 334 102 0 34 chr2 218150699 218150758 -35105825 - L1MA5A LINE L1 -5 6292 6236 7577 194 100 41 chr2 218150758 218151668 -35104915 - L1MC1 LINE L1 -3584 2842 1987 871 132 0 22 chr2 218151668 218151804 -35104779 - FLAM_C SINE Alu 0 133 1 7577 194 100 41 chr2 218151804 218153268 -35103315 - L1MC1 LINE L1 -4439 1987 5 2053 240 109 19 chr2 218153266 218153961 -35102622 - L1MC4 LINE L1 -188 7854 7097 * 2065 111 14 3 chr2 218154002 218154291 -35102292 - AluSq SINE Alu -19 294 3 2155 209 250 4 chr2 218154293 218155006 -35101577 - L2 LINE L2 -758 2556 1669 26 0 0 0 chr2 218155447 218155473 -35101110 + AT_rich Low_complexity Low_complexity 1 26 0 462 292 46 3 chr2 218155505 218155647 -35100936 + MIR SINE MIR 44 190 -63 1247 203 41 19 chr2 218155870 218156186 -35100397 - MER58D DNA MER1_type -60 326 4 421 209 54 31 chr2 218156409 218156538 -35100045 - L1MD3 LINE L1 -33 7962 7831 1894 140 17 3 chr2 218156833 218157126 -35099457 - AluSx SINE Alu -15 297 1 2147 105 13 0 chr2 218157266 218157571 -35099012 - AluSc SINE Alu 0 309 1 974 180 6 0 chr2 218157854 218158026 -35098557 + FAM SINE Alu 1 173 -2 2261 104 0 10 chr2 218160781 218161090 -35095493 + AluY SINE Alu 1 306 -5 306 244 0 0 chr2 218161213 218161295 -35095288 + (CATATA)n Simple_repeat Simple_repeat 3 84 0 1957 151 82 31 chr2 218161307 218161698 -35094885 - Tigger2a DNA MER2_type -23 411 1 194 128 26 0 chr2 218163763 218163802 -35092781 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 2046 136 0 10 chr2 218164758 218165060 -35091523 - AluSx SINE Alu -13 299 1 509 353 101 29 chr2 218165414 218165830 -35090753 + L3 LINE CR1 39 484 -1093 1362 139 7 76 chr2 218165938 218166098 -35090485 - L1MA7 LINE L1 -23 6289 6183 1920 162 0 7 chr2 218166098 218166401 -35090182 + AluJb SINE Alu 1 301 -11 1362 139 7 76 chr2 218166401 218166608 -35089975 - L1MA7 LINE L1 -129 6183 5963 2248 107 0 0 chr2 218166691 218166989 -35089594 - AluSq SINE Alu -15 298 1 730 312 187 35 chr2 218167007 218167841 -35088742 + L3 LINE CR1 521 1570 -7 198 370 0 25 chr2 218167889 218167970 -35088613 + L3 LINE CR1 1475 1553 -24 571 311 66 36 chr2 218168566 218169093 -35087490 + L1MC4 LINE L1 7326 7994 -48 261 333 0 0 chr2 218170301 218170385 -35086198 + L2 LINE L2 3175 3258 -14 2355 96 0 0 chr2 218171563 218171864 -35084719 - AluSx SINE Alu -11 301 1 21 0 0 0 chr2 218172416 218172437 -35084146 + AT_rich Low_complexity Low_complexity 1 21 0 2223 109 3 0 chr2 218172598 218172900 -35083683 + AluSg SINE Alu 1 303 -7 725 119 34 0 chr2 218173715 218173833 -35082750 - MER30 DNA MER1_type 0 230 109 6364 29 0 1 chr2 218173856 218174604 -35081979 - L1PA3 LINE L1 0 6155 5409 6304 26 9 0 chr2 218174604 218175412 -35081171 + L1PA3 LINE L1 4631 5442 -713 722 57 86 0 chr2 218175412 218175517 -35081066 - MER30 DNA MER1_type -116 114 1 274 301 19 29 chr2 218176508 218176611 -35079972 - MER5B DNA MER1_type -3 175 74 2035 98 7 0 chr2 218176677 218176953 -35079630 + AluSg SINE Alu 24 301 -9 277 300 11 11 chr2 218177025 218177115 -35079468 - MER5A DNA MER1_type -5 184 95 182 219 0 0 chr2 218177133 218177165 -35079418 - L2 LINE L2 -862 2452 2421 210 268 62 72 chr2 218179395 218179492 -35077091 + MIR3 SINE MIR 64 159 -49 2168 100 10 7 chr2 218179547 218179847 -35076736 - AluSq SINE Alu -1 312 12 1666 170 37 10 chr2 218180086 218180380 -35076203 + AluJo SINE Alu 5 306 -6 2781 68 3 0 chr2 218180697 218181062 -35075521 - L1PA5 LINE L1 -19 6135 5770 23 0 0 0 chr2 218181062 218181085 -35075498 + AT_rich Low_complexity Low_complexity 1 23 0 7340 35 0 0 chr2 218181085 218182066 -35074517 - L1PA3 LINE L1 -3 6152 5180 255 329 35 77 chr2 218185064 218185350 -35071233 + L1MC/D LINE L1 5388 5661 -2147 1975 138 31 20 chr2 218186513 218186868 -35069715 - MER46B DNA MER2_type -2 234 1 411 275 192 0 chr2 218188952 218189072 -35067511 - L2 LINE L2 -1 3271 3129 2031 135 7 0 chr2 218189361 218189658 -35066925 - AluSx SINE Alu -13 299 1 811 313 88 17 chr2 218190126 218190677 -35065906 + L1ME4a LINE L1 5311 5902 -219 276 200 0 0 chr2 218190706 218190766 -35065817 + (TATG)n Simple_repeat Simple_repeat 3 62 0 2446 74 0 0 chr2 218190935 218191233 -35065350 + AluY SINE Alu 1 298 -13 200 222 173 0 chr2 218191609 218191690 -35064893 - MIR SINE MIR -36 226 132 22 70 0 0 chr2 218191771 218191814 -35064769 + AT_rich Low_complexity Low_complexity 1 43 0 587 189 45 0 chr2 218191814 218191925 -35064658 - AluJb SINE Alu -196 116 1 1579 272 121 0 chr2 218192102 218192802 -35063781 + L2 LINE L2 2518 3303 -10 27 62 0 0 chr2 218193916 218193964 -35062619 + AT_rich Low_complexity Low_complexity 1 48 0 21 95 0 0 chr2 218194555 218194618 -35061965 + AT_rich Low_complexity Low_complexity 1 63 0 303 152 61 0 chr2 218195332 218195398 -35061185 - MLT1D LTR MaLR 0 505 436 210 180 0 0 chr2 218195400 218195461 -35061122 + (TA)n Simple_repeat Simple_repeat 2 62 0 326 118 0 26 chr2 218195506 218195582 -35061001 + (TCTA)n Simple_repeat Simple_repeat 1 74 0 1377 182 79 53 chr2 218195643 218195709 -35060874 + Charlie1 DNA MER1_type 3 66 -2695 2122 125 0 3 chr2 218195709 218196005 -35060578 - AluSx SINE Alu -17 295 1 1377 182 79 53 chr2 218196005 218196423 -35060160 + Charlie1 DNA MER1_type 66 2761 0 182 385 56 19 chr2 218197123 218197284 -35059299 + MIR3 SINE MIR 3 169 -39 337 227 27 0 chr2 218197607 218197682 -35058901 - HsTC2 DNA Tc2 -1519 379 303 1992 128 0 7 chr2 218198979 218199261 -35057322 - AluSx SINE Alu -3 309 30 1521 216 8 35 chr2 218199465 218199840 -35056743 - MLT1A1 LTR MaLR 0 365 1 241 293 120 30 chr2 218199841 218199974 -35056609 + L2 LINE L2 3119 3263 -50 1864 122 0 0 chr2 218200774 218201028 -35055555 - AluSx SINE Alu -9 303 50 200 261 62 0 chr2 218201292 218201357 -35055226 + MIR SINE MIR 183 251 -11 2057 104 0 4 chr2 218201363 218201631 -35054952 + AluSg SINE Alu 16 282 -28 247 167 77 64 chr2 218202497 218202575 -35054008 + L1MC/D LINE L1 5707 5785 -2023 1836 152 0 3 chr2 218202745 218203051 -35053532 + AluJb SINE Alu 1 305 0 2167 94 3 10 chr2 218204460 218204748 -35051835 - AluSq SINE Alu -27 286 1 267 348 186 6 chr2 218204794 218204955 -35051628 - L2 LINE L2 0 3272 3083 291 269 175 0 chr2 218205327 218205487 -35051096 + LTR9B LTR ERV1 451 638 -6 349 224 19 37 chr2 218205492 218205599 -35050984 + HUERS-P3 LTR ERV1 1 105 -8814 * 23305 151 28 24 chr2 218205573 218205599 -35050984 + HUERS-P3 LTR ERV1 348 372 -8547 7108 52 7 0 chr2 218205599 218207202 -35049381 - L1PA6 LINE L1 -1 6153 4544 23305 151 28 24 chr2 218207202 218207570 -35049013 + HUERS-P3 LTR ERV1 372 737 -8182 2467 75 3 0 chr2 218207570 218207877 -35048706 + AluY SINE Alu 1 308 -3 23305 151 28 24 chr2 218207877 218211510 -35045073 + HUERS-P3 LTR ERV1 737 4497 -4422 1608 148 24 4 chr2 218211508 218211758 -35044825 + HUERS-P3 LTR ERV1 5993 6247 -2672 * 282 307 134 8 chr2 218211859 218211986 -35044597 - MIR SINE MIR -92 170 28 311 302 85 23 chr2 218212174 218212303 -35044280 + L1ME2 LINE L1 5790 5926 -238 1868 111 0 0 chr2 218212567 218212810 -35043773 + AluSx SINE Alu 1 243 -69 236 235 56 130 chr2 218213343 218213505 -35043078 + MIR SINE MIR 79 228 -34 254 299 63 31 chr2 218214188 218214315 -35042268 + MIR3 SINE MIR 3 133 -75 270 0 0 0 chr2 218214745 218214775 -35041808 + (CA)n Simple_repeat Simple_repeat 1 30 0 3415 121 64 2 chr2 218215344 218215890 -35040693 - LTR19B LTR ERV1 0 580 1 37 23 0 0 chr2 218215909 218215953 -35040630 + AT_rich Low_complexity Low_complexity 1 44 0 510 266 9 0 chr2 218216271 218216384 -35040199 + Cheshire DNA MER1_type 9 122 -2298 2379 171 58 22 chr2 218216384 218216887 -35039696 + L1MC3 LINE L1 7255 7775 -10 5002 184 131 27 chr2 218216909 218218158 -35038425 + Cheshire DNA MER1_type 115 1493 -927 3482 55 16 0 chr2 218218195 218218632 -35037951 + MLT2A1 LTR ERVL 1 444 0 1226 110 17 0 chr2 218219438 218219611 -35036972 - AluSg/x SINE Alu -2 310 135 374 310 79 30 chr2 218219861 218220164 -35036419 + L1 LINE L1 4204 4521 -1625 257 280 0 0 chr2 218220287 218220380 -35036203 + L1M4 LINE L1 3702 3794 -2352 294 250 23 0 chr2 218220382 218220470 -35036113 + L1M4 LINE L1 3895 3984 -2162 4166 87 17 15 chr2 218220561 218221699 -35034884 - L1PA4 LINE L1 -496 5659 4873 4095 38 0 0 chr2 218221699 218222194 -35034389 + L1PA4 LINE L1 5661 6155 0 394 276 30 47 chr2 218222210 218222380 -35034203 - L1MC/D LINE L1 -596 5575 5458 22 35 0 0 chr2 218222419 218222448 -35034135 + AT_rich Low_complexity Low_complexity 1 29 0 1687 215 93 0 chr2 218222509 218222885 -35033698 - L1MD2 LINE L1 -2 6357 5947 224 29 0 29 chr2 218223261 218223295 -35033288 + (TG)n Simple_repeat Simple_repeat 1 33 0 1569 235 118 6 chr2 218223810 218224278 -35032305 - MLT2B1 LTR ERVL 0 520 1 1219 174 37 40 chr2 218224557 218224856 -35031727 - L1MD1 LINE L1 0 6242 5945 * 3156 228 31 20 chr2 218224831 218225796 -35030787 - L1MDa LINE L1 -2839 3701 2726 634 280 135 79 chr2 218225815 218226194 -35030389 - L1MDa LINE L1 -5670 870 471 543 231 25 99 chr2 218226202 218226444 -35030139 - MER65B LTR ERV1 -307 224 1 1338 292 23 27 chr2 218226444 218226927 -35029656 - MER65B-int LTR ERV1 -22 4849 4369 486 190 37 11 chr2 218226933 218227071 -35029512 + MER31-int LTR ERV1 3346 3452 -1484 2613 155 34 9 chr2 218227168 218227612 -35028971 + MER66B LTR ERV1 27 481 -5 1293 234 38 25 chr2 218227615 218227931 -35028652 - L1MDa LINE L1 -6195 345 26 1762 140 60 33 chr2 218228399 218228764 -35027819 + THE1C LTR MaLR 1 375 0 183 42 0 0 chr2 218229124 218229148 -35027435 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 334 198 160 38 chr2 218229513 218229619 -35026964 + MLT1F1 LTR MaLR 449 567 0 228 226 52 9 chr2 218229675 218229790 -35026793 + (TTATA)n Simple_repeat Simple_repeat 5 124 0 372 273 0 0 chr2 218229989 218230099 -35026484 - HUERS-P3 LTR ERV1 -8809 110 1 3960 111 66 3 chr2 218230101 218230705 -35025878 - LTR9B LTR ERV1 -2 642 1 2175 186 98 53 chr2 218231935 218232514 -35024069 + MER77 LTR ERV1 1 605 0 204 294 142 5 chr2 218234274 218234478 -35022105 + L2 LINE L2 2853 3084 -188 303 339 71 24 chr2 218235561 218235688 -35020895 + MIR3 SINE MIR 3 135 -73 661 219 188 67 chr2 218236282 218236780 -35019803 - MLT1G1 LTR MaLR -3 552 1 1754 181 41 3 chr2 218238372 218238715 -35017868 + MLT1A1 LTR MaLR 6 361 -4 470 266 12 26 chr2 218238715 218238846 -35017737 - MIR SINE MIR -61 147 33 21 57 0 0 chr2 218240850 218240885 -35015698 + AT_rich Low_complexity Low_complexity 1 35 0 880 176 42 0 chr2 218241230 218241395 -35015188 + FRAM SINE Alu 5 176 0 372 43 0 0 chr2 218241400 218241446 -35015137 + (GA)n Simple_repeat Simple_repeat 1 46 0 991 192 8 73 chr2 218241545 218241779 -35014804 - MER20 DNA MER1_type 0 219 1 333 314 58 22 chr2 218242547 218242773 -35013810 - LTR16A LTR ERVL -10 440 207 3200 177 42 5 chr2 218242907 218243527 -35013056 + HUERS-P3 LTR ERV1 6999 7641 -1278 315 333 0 0 chr2 218243529 218243625 -35012958 - L2 LINE L2 -9 3304 3209 375 23 0 0 chr2 218244163 218244207 -35012376 + (TG)n Simple_repeat Simple_repeat 1 44 0 2442 60 0 25 chr2 218245090 218245404 -35011179 - AluY SINE Alu -5 306 1 225 238 38 86 chr2 218245505 218245625 -35010958 + MIR SINE MIR 32 152 -56 21 71 0 0 chr2 218246214 218246256 -35010327 + AT_rich Low_complexity Low_complexity 1 42 0 1220 169 88 99 chr2 218246500 218246873 -35009710 + MLT1A2 LTR MaLR 1 369 -5 249 83 0 0 chr2 218246902 218246938 -35009645 + (CA)n Simple_repeat Simple_repeat 1 36 0 185 298 0 0 chr2 218246938 218246985 -35009598 - MIR SINE MIR -18 244 198 256 287 19 19 chr2 218248068 218248176 -35008407 - L1ME LINE L1 -686 5435 5328 1306 151 51 77 chr2 218251015 218251367 -35005216 + L1ME1 LINE L1 5551 5893 -273 361 175 0 0 chr2 218251597 218251660 -35004923 - MLT1E1 LTR MaLR -414 240 178 907 181 0 12 chr2 218251844 218252004 -35004579 + FRAM SINE Alu 1 158 -18 288 289 10 48 chr2 218252219 218252323 -35004260 - MIR SINE MIR -96 166 67 2270 113 0 0 chr2 218253558 218253849 -35002734 - AluSx SINE Alu -16 296 6 393 270 51 15 chr2 218254452 218254589 -35001994 - MIR SINE MIR -33 229 88 1650 202 6 17 chr2 218254623 218254969 -35001614 - MLT1A1 LTR MaLR -1 364 23 6848 52 9 38 chr2 218255025 218256549 -35000034 + SVA Other Other 13 1375 -11 22 35 0 0 chr2 218256549 218256578 -35000005 + AT_rich Low_complexity Low_complexity 1 29 0 237 33 0 0 chr2 218257740 218257770 -34998813 + (CACAT)n Simple_repeat Simple_repeat 5 34 0 21 36 0 0 chr2 218258292 218258320 -34998263 + AT_rich Low_complexity Low_complexity 1 28 0 336 311 31 44 chr2 218259145 218259221 -34997362 - L1MDa LINE L1 -3319 2810 2735 2428 77 0 0 chr2 218259221 218259521 -34997062 + AluSx SINE Alu 1 300 -12 336 311 31 44 chr2 218259521 218259900 -34996683 - L1MDa LINE L1 -3394 2735 2361 32 57 0 0 chr2 218259914 218259967 -34996616 + AT_rich Low_complexity Low_complexity 1 53 0 800 162 36 0 chr2 218260031 218260198 -34996385 - L1MB2 LINE L1 -3 6168 5996 382 305 18 0 chr2 218260198 218260365 -34996218 - L1MDa LINE L1 -3862 2267 2098 378 317 8 0 chr2 218260762 218260929 -34995654 - L1MDa LINE L1 -4582 1547 1379 2328 68 0 59 chr2 218260962 218261283 -34995300 - AluY SINE Alu -9 302 1 513 276 96 26 chr2 218261351 218261778 -34994805 - L1MDa LINE L1 -4874 1245 789 302 393 9 0 chr2 218261847 218261959 -34994624 - L1MDa LINE L1 -5455 664 552 270 248 45 38 chr2 218262307 218262440 -34994143 - L1MDa LINE L1 -5983 136 3 242 268 18 0 chr2 218262575 218262631 -34993952 - MIR3 SINE MIR -11 197 141 216 303 41 41 chr2 218262828 218262914 -34993669 - L2 LINE L2 -217 3055 2967 1991 184 69 69 chr2 218262914 218263468 -34993115 - MLT2B3 LTR ERVL 0 554 1 216 303 41 41 chr2 218263468 218263503 -34993080 - L2 LINE L2 -304 2968 2934 2050 107 53 0 chr2 218264450 218264731 -34991852 + AluSq SINE Alu 1 296 -17 2365 203 50 42 chr2 218265699 218266320 -34990263 + MLT1E2 LTR MaLR 1 626 0 383 282 169 37 chr2 218266445 218266718 -34989865 - L2 LINE L2 -16 3297 2989 509 276 20 49 chr2 218266810 218266841 -34989742 - L2 LINE L2 -627 2687 2657 2647 164 21 19 chr2 218266841 218267312 -34989271 - MER70A LTR ERVL 0 472 1 509 276 20 49 chr2 218267312 218267483 -34989100 - L2 LINE L2 -657 2657 2491 234 200 50 0 chr2 218268531 218268591 -34987992 + (TTATA)n Simple_repeat Simple_repeat 2 64 0 282 339 38 38 chr2 218268760 218268943 -34987640 - MIR3 SINE MIR -6 202 20 30 27 0 0 chr2 218269907 218269944 -34986639 + AT_rich Low_complexity Low_complexity 1 37 0 504 315 91 40 chr2 218270214 218270577 -34986006 + L1ME4a LINE L1 5563 5963 -158 461 198 188 0 chr2 218270577 218270678 -34985905 + FLAM_A SINE Alu 1 120 -13 504 315 91 40 chr2 218270678 218270844 -34985739 + L1ME4a LINE L1 5963 6119 -2 21 0 0 0 chr2 218270851 218270872 -34985711 + AT_rich Low_complexity Low_complexity 1 21 0 1314 188 10 124 chr2 218271502 218271906 -34984677 - MER21A LTR ERV1 -233 698 341 479 152 0 0 chr2 218271898 218271977 -34984606 + MER39B LTR ERV1 385 463 -190 * 903 217 70 4 chr2 218271977 218272207 -34984376 + L1MD2 LINE L1 5889 6133 -226 439 260 45 7 chr2 218272221 218272375 -34984208 + L1MD2 LINE L1 6197 6356 -3 392 190 73 159 chr2 218272371 218272603 -34983980 + L1ME2 LINE L1 5815 6026 -138 * 266 250 0 0 chr2 218272605 218272673 -34983910 + L1ME2 LINE L1 6087 6154 -10 1534 198 16 3 chr2 218273344 218273662 -34982921 - MER2 DNA MER2_type 0 345 24 253 272 25 0 chr2 218274556 218274637 -34981946 + MLT1H LTR MaLR 119 201 -348 403 246 60 30 chr2 218274642 218274776 -34981807 + MLT1H LTR MaLR 402 539 -10 842 148 0 0 chr2 218277552 218277680 -34978903 - FLAM_C SINE Alu -5 138 11 2345 74 0 0 chr2 218277725 218278063 -34978520 + AluY SINE Alu 1 338 0 21 71 0 0 chr2 218278132 218278174 -34978409 + AT_rich Low_complexity Low_complexity 1 42 0 1811 85 65 0 chr2 218278820 218279067 -34977516 + AluY SINE Alu 35 297 -14 33 43 0 0 chr2 218279103 218279150 -34977433 + AT_rich Low_complexity Low_complexity 1 47 0 370 299 133 21 chr2 218279620 218279854 -34976729 + L2 LINE L2 3051 3310 -3 357 24 0 0 chr2 218279855 218279897 -34976686 + (TAGA)n Simple_repeat Simple_repeat 3 44 0 21 36 0 0 chr2 218280184 218280212 -34976371 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 218282096 218282120 -34974463 + AT_rich Low_complexity Low_complexity 1 24 0 317 272 179 49 chr2 218282490 218282634 -34973949 + MIR SINE MIR 47 211 -51 542 287 10 63 chr2 218282634 218282914 -34973669 + MIR SINE MIR 2 262 0 319 278 302 0 chr2 218283275 218283444 -34973139 - MIR SINE MIR -12 250 31 194 176 29 0 chr2 218284283 218284317 -34972266 + MIR SINE MIR 117 151 -111 1481 199 46 53 chr2 218284811 218285204 -34971379 + MLT1B LTR MaLR 1 390 0 312 348 28 0 chr2 218285831 218285972 -34970611 - MIR3 SINE MIR -6 202 58 222 294 47 0 chr2 218285982 218286067 -34970516 + L2 LINE L2 2707 2795 -519 1881 134 0 11 chr2 218286499 218286775 -34969808 + AluSx SINE Alu 1 273 -39 1908 99 53 11 chr2 218286944 218287228 -34969355 - AluY SINE Alu -15 296 1 321 313 69 23 chr2 218287359 218287490 -34969093 - L2 LINE L2 -1 3312 3176 21 0 0 0 chr2 218288577 218288598 -34967985 + AT_rich Low_complexity Low_complexity 1 21 0 294 305 130 20 chr2 218289621 218289777 -34966806 - MIR SINE MIR -56 206 38 238 273 82 9 chr2 218289778 218289888 -34966695 - MLT1L LTR MaLR -2 613 496 255 200 50 0 chr2 218290069 218290129 -34966454 - MLT1J LTR MaLR -344 167 105 751 182 0 8 chr2 218291580 218291712 -34964871 + FLAM_C SINE Alu 2 132 -1 342 0 0 0 chr2 218291712 218291750 -34964833 + (TG)n Simple_repeat Simple_repeat 2 39 0 432 192 71 0 chr2 218291807 218291906 -34964677 + MER58A DNA MER1_type 46 151 0 1740 151 7 0 chr2 218292017 218292288 -34964295 + AluSx SINE Alu 25 297 -15 225 205 53 26 chr2 218292585 218292736 -34963847 + (TTATA)n Simple_repeat Simple_repeat 5 159 0 37 62 0 0 chr2 218293352 218293417 -34963166 + AT_rich Low_complexity Low_complexity 1 65 0 2331 153 28 33 chr2 218294633 218295059 -34961524 - MSTB LTR MaLR -2 424 1 245 294 57 4 chr2 218296109 218296226 -34960357 - MIR SINE MIR -2 206 78 230 143 95 0 chr2 218296271 218296313 -34960270 + MER5C DNA MER1_type 31 76 -248 382 242 22 11 chr2 218297503 218297594 -34958989 + MIR SINE MIR 170 261 -1 23 68 0 0 chr2 218299255 218299299 -34957284 + AT_rich Low_complexity Low_complexity 1 44 0 1995 143 13 3 chr2 218299483 218299790 -34956793 + AluSx SINE Alu 1 310 -2 185 0 40 0 chr2 218301496 218301521 -34955062 + (TTTTTG)n Simple_repeat Simple_repeat 1 26 0 3499 83 63 104 chr2 218301934 218302595 -34953988 - MER51A LTR ERV1 0 634 1 1596 197 76 27 chr2 218304560 218304966 -34951617 - L1MB2 LINE L1 -9 6162 5737 2283 153 52 105 chr2 218304966 218305462 -34951121 + MLT2B2 LTR ERVL 1 470 -45 322 213 5 58 chr2 218305477 218305665 -34950918 + (TA)n Simple_repeat Simple_repeat 2 179 0 238 97 0 0 chr2 218305666 218305697 -34950886 + MLT2C1 LTR ERVL 367 397 0 2527 177 27 37 chr2 218305697 218305947 -34950636 - L1MB2 LINE L1 -430 5741 5490 234 0 0 0 chr2 218305947 218305973 -34950610 + (TG)n Simple_repeat Simple_repeat 2 27 0 2527 177 27 37 chr2 218305973 218306127 -34950456 - L1MB2 LINE L1 -681 5490 5336 5776 122 36 0 chr2 218306127 218307156 -34949427 - L1PA15 LINE L1 0 6165 5116 2527 177 27 37 chr2 218307156 218307604 -34948979 - L1MB2 LINE L1 -835 5336 4887 5206 216 82 34 chr2 218307813 218309100 -34947483 - L1MB2 LINE L1 -1217 4929 3554 1830 117 15 86 chr2 218309100 218309266 -34947317 - AluJo SINE Alu -10 302 169 367 35 35 0 chr2 218309266 218309323 -34947260 + (TA)n Simple_repeat Simple_repeat 1 59 0 1830 117 15 86 chr2 218309323 218309481 -34947102 - AluJo SINE Alu -143 169 1 5206 216 82 34 chr2 218309481 218309736 -34946847 - L1MB2 LINE L1 -2592 3554 3313 2109 163 15 32 chr2 218310092 218310458 -34946125 + MER57A LTR ERV1 1 361 -42 2030 108 65 0 chr2 218310458 218310737 -34945846 - AluSq SINE Alu -16 297 1 2109 163 15 32 chr2 218310737 218310776 -34945807 + MER57A LTR ERV1 361 399 -4 773 106 35 0 chr2 218310776 218310889 -34945694 - AluSx SINE Alu -2 308 192 1107 106 0 0 chr2 218310890 218311031 -34945552 - AluSx SINE Alu -172 141 1 190 0 32 32 chr2 218311872 218311903 -34944680 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 181 282 42 28 chr2 218312072 218312143 -34944440 + L3 LINE CR1 997 1068 -509 2033 108 31 0 chr2 218312732 218313019 -34943564 - AluSx SINE Alu -16 296 1 2566 64 0 0 chr2 218313523 218313834 -34942749 + AluY SINE Alu 1 311 0 416 268 68 34 chr2 218313882 218314087 -34942496 + LTR49-int LTR ERV1 6119 6330 -1 2453 147 20 5 chr2 218314134 218314536 -34942047 - MSTB LTR MaLR 0 426 19 1478 143 56 45 chr2 218314637 218314903 -34941680 + THE1B LTR MaLR 96 364 0 2550 155 7 0 chr2 218314905 218315330 -34941253 + L1PA16 LINE L1 5730 6157 -9 23 0 0 0 chr2 218315330 218315353 -34941230 + AT_rich Low_complexity Low_complexity 1 23 0 2429 268 28 52 chr2 218315885 218316628 -34939955 + L1PA15 LINE L1 1 725 -6062 4441 222 27 14 chr2 218316943 218318045 -34938538 + L1PA15 LINE L1 1312 2435 -4362 11243 207 38 11 chr2 218318052 218319389 -34937194 + L1PA15 LINE L1 2969 4268 -2548 441 0 0 0 chr2 218319389 218319438 -34937145 + (CA)n Simple_repeat Simple_repeat 2 50 0 11243 207 38 11 chr2 218319438 218321832 -34934751 + L1PA15 LINE L1 4268 6803 -13 458 33 17 0 chr2 218321836 218321896 -34934687 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 3055 25 0 0 chr2 218323914 218324271 -34932312 + L1PA4 LINE L1 5796 6152 -3 996 325 45 16 chr2 218324354 218324732 -34931851 - L2 LINE L2 -1795 1519 1131 420 301 106 70 chr2 218325855 218326527 -34930056 + L1MB1 LINE L1 2177 2872 -3274 460 314 87 55 chr2 218326619 218327370 -34929213 + L1MB1 LINE L1 3058 3832 -2314 2844 82 3 8 chr2 218327647 218328024 -34928559 + THE1C LTR MaLR 1 375 0 378 202 146 0 chr2 218328347 218328436 -34928147 + Tigger1 DNA MER2_type 2 103 -2315 864 223 11 48 chr2 218328437 218328739 -34927844 + L1MB1 LINE L1 5149 5442 -726 2410 175 44 6 chr2 218328740 218329242 -34927341 + L1MB1 LINE L1 5648 6168 0 12810 132 34 23 chr2 218329244 218330350 -34926233 + Tigger1 DNA MER2_type 1 1093 -1325 2060 129 7 10 chr2 218330350 218330652 -34925931 + AluSx SINE Alu 1 301 -11 12810 132 34 23 chr2 218330652 218331918 -34924665 + Tigger1 DNA MER2_type 1093 2418 0 234 0 0 0 chr2 218331918 218331944 -34924639 + (CATA)n Simple_repeat Simple_repeat 3 28 0 199 158 26 0 chr2 218332931 218332969 -34923614 + MIR SINE MIR 110 148 -114 298 244 89 0 chr2 218332978 218333068 -34923515 - MIR SINE MIR -3 259 162 21 0 0 0 chr2 218333861 218333882 -34922701 + AT_rich Low_complexity Low_complexity 1 21 0 255 103 0 0 chr2 218333885 218333924 -34922659 + (TG)n Simple_repeat Simple_repeat 1 39 0 202 217 22 0 chr2 218333924 218333970 -34922613 + GA-rich Low_complexity Low_complexity 2 48 0 21 57 0 0 chr2 218334513 218334548 -34922035 + AT_rich Low_complexity Low_complexity 1 35 0 1499 158 103 33 chr2 218336468 218336866 -34919717 + LTR37A LTR ERV1 1 426 0 269 281 21 123 chr2 218337097 218337332 -34919251 + MLT1L LTR MaLR 1 211 -404 321 269 28 28 chr2 218337516 218337657 -34918926 + MLT1K LTR MaLR 448 588 0 25 0 0 0 chr2 218337811 218337836 -34918747 + AT_rich Low_complexity Low_complexity 1 25 0 316 293 120 16 chr2 218338307 218338498 -34918085 + L1ME LINE L1 5390 5600 -521 260 327 95 12 chr2 218338544 218338712 -34917871 + L1ME LINE L1 5682 5863 -258 255 221 0 15 chr2 218339175 218339243 -34917340 + L1MC/D LINE L1 5705 5771 -2037 1643 228 34 4 chr2 218339250 218339696 -34916887 + MER89 LTR ERV1 1 559 0 351 343 45 16 chr2 218339807 218340189 -34916394 + L1ME3A LINE L1 5565 5957 -213 3039 227 39 23 chr2 218340444 218341729 -34914854 + L1ME1 LINE L1 4639 6088 -78 1991 138 5 115 chr2 218341729 218341751 -34914832 + MLT1B LTR MaLR 2 25 -365 2080 151 122 8 chr2 218341751 218342135 -34914448 - MSTA LTR MaLR 0 428 1 1991 138 5 115 chr2 218342135 218342546 -34914037 + MLT1B LTR MaLR 25 387 -3 21 0 0 0 chr2 218342655 218342676 -34913907 + AT_rich Low_complexity Low_complexity 1 21 0 2197 80 7 40 chr2 218344734 218345033 -34911550 + AluY SINE Alu 1 289 -22 298 172 188 0 chr2 218345548 218345612 -34910971 - MLT1C LTR MaLR 0 467 392 2119 160 49 20 chr2 218345613 218346019 -34910564 - MLT1C LTR MaLR -49 418 1 1728 153 0 0 chr2 218346092 218346386 -34910197 + L1PA15 LINE L1 4606 4899 -1247 2195 154 36 28 chr2 218346386 218346932 -34909651 + MLT2A2 LTR ERVL 1 554 0 5688 118 19 3 chr2 218346935 218348192 -34908391 + L1PA15 LINE L1 4898 6165 0 931 216 0 5 chr2 218348782 218348972 -34907611 + MER5A DNA MER1_type 1 189 0 203 302 156 21 chr2 218349321 218349417 -34907166 + MER5B DNA MER1_type 38 146 -32 472 275 106 25 chr2 218349703 218349936 -34906647 - MIR SINE MIR -13 249 7 412 281 260 20 chr2 218350120 218350316 -34906267 - MIR SINE MIR -10 252 10 447 257 9 0 chr2 218350527 218350632 -34905951 - MLT1F1 LTR MaLR -7 535 430 596 240 64 114 chr2 218350643 218350928 -34905655 - MLT1F1 LTR MaLR -252 290 19 1215 179 123 47 chr2 218351065 218351383 -34905200 - MER2 DNA MER2_type -1 343 2 5002 31 0 0 chr2 218351533 218352121 -34904462 + L1PA4 LINE L1 5565 6152 -3 316 182 322 0 chr2 218352132 218352253 -34904330 + MER69 DNA AcHobo 2279 2438 -88 221 351 11 0 chr2 218353182 218353276 -34903307 - MIR SINE MIR -137 125 31 817 176 12 0 chr2 218353341 218353528 -34903055 - L1PA12 LINE L1 0 6168 6001 181 279 47 0 chr2 218353689 218353732 -34902851 - MER5B DNA MER1_type -57 121 77 24 53 0 0 chr2 218353861 218353899 -34902684 + AT_rich Low_complexity Low_complexity 1 38 0 4849 60 10 2 chr2 218354027 218354646 -34901937 + L1PA7 LINE L1 5530 6153 -1 1116 218 83 39 chr2 218354811 218355173 -34901410 + L1MC4 LINE L1 7278 7655 -387 1193 271 82 11 chr2 218355981 218356358 -34900225 + Charlie1a DNA MER1_type 6 409 -1046 1792 234 94 44 chr2 218356361 218356956 -34899627 + MLT1E2 LTR MaLR 1 625 -1 3121 202 41 13 chr2 218356957 218357706 -34898877 + Charlie1a DNA MER1_type 408 1177 -278 590 253 0 14 chr2 218357710 218357856 -34898727 + L1PA11 LINE L1 7 150 -7431 * 9648 143 25 24 chr2 218357845 218359600 -34896983 + L1PA11 LINE L1 4011 5767 -1817 5696 113 29 5 chr2 218359600 218361169 -34895414 + L1PA11 LINE L1 6009 7610 -2 758 194 126 4 chr2 218361186 218361433 -34895150 + Charlie1a DNA MER1_type 1164 1440 -15 41074 63 3 4 chr2 218361788 218367947 -34888636 + L1PA5 LINE L1 2 6154 0 12738 188 27 21 chr2 218368176 218371955 -34884628 + L1PA15 LINE L1 2256 6046 -119 1197 158 0 53 chr2 218371955 218372164 -34884419 + AluJb SINE Alu 94 291 -21 399 94 62 0 chr2 218372172 218372236 -34884347 + L1PA15 LINE L1 6092 6159 -6 3759 140 21 3 chr2 218373840 218374420 -34882163 + MER50 LTR ERV1 133 722 -12 895 287 55 43 chr2 218374523 218374944 -34881639 + LTR16A LTR ERVL 25 450 0 21 0 0 0 chr2 218375718 218375739 -34880844 + AT_rich Low_complexity Low_complexity 1 21 0 1563 282 27 16 chr2 218375875 218376325 -34880258 - LTR40a LTR ERVL -62 457 3 1944 155 13 7 chr2 218379240 218379549 -34877034 - AluSx SINE Alu -1 311 1 381 353 64 0 chr2 218379908 218380064 -34876519 - L2 LINE L2 -4 3268 3103 767 309 48 46 chr2 218380416 218380788 -34875795 + MLT1K LTR MaLR 216 588 0 2237 116 3 0 chr2 218381245 218381556 -34875027 + AluSx SINE Alu 1 312 0 22 0 0 0 chr2 218381820 218381842 -34874741 + AT_rich Low_complexity Low_complexity 1 22 0 1028 243 60 73 chr2 218381995 218382365 -34874218 + MLT1A1 LTR MaLR 1 365 0 339 229 101 28 chr2 218383703 218383812 -34872771 - HERV16 LTR ERVL -3129 1867 1751 1527 330 40 10 chr2 218383906 218384502 -34872081 - HERV16 LTR ERVL -3420 1576 963 204 135 27 0 chr2 218384508 218384545 -34872038 + T-rich Low_complexity Low_complexity 5 42 0 8582 34 2 0 chr2 218384548 218386348 -34870235 - L1PA3 LINE L1 -3 6152 4350 272 329 27 34 chr2 218386350 218386499 -34870084 - HERV16 LTR ERVL -4028 968 821 3133 251 114 42 chr2 218386630 218387835 -34868748 + L1ME2 LINE L1 3275 4649 -1497 6295 52 9 0 chr2 218387835 218388617 -34867966 + L1PA7 LINE L1 5364 6152 -2 3133 251 114 42 chr2 218388617 218389175 -34867408 + L1ME2 LINE L1 4649 5165 -981 1094 234 35 44 chr2 218389176 218389835 -34866748 + L1ME2 LINE L1 5305 6020 -144 230 147 0 0 chr2 218389835 218389869 -34866714 + MER3 DNA MER1_type 16 49 -160 293 243 12 3 chr2 218389869 218389969 -34866614 + L1ME3 LINE L1 6064 6162 -4 32 26 0 0 chr2 218391545 218391584 -34864999 + AT_rich Low_complexity Low_complexity 1 39 0 311 215 0 9 chr2 218391932 218392039 -34864544 + (TGGA)n Simple_repeat Simple_repeat 4 109 0 225 224 9 112 chr2 218392080 218392196 -34864387 - L1ME3A LINE L1 -105 6065 5962 1371 270 116 8 chr2 218392247 218392883 -34863700 - L1ME3A LINE L1 -208 5962 5258 1011 145 11 0 chr2 218392931 218393117 -34863466 - L1MA7 LINE L1 -2 6289 6102 306 354 0 62 chr2 218393121 218393316 -34863267 - L1ME3A LINE L1 -1749 4397 4215 1089 249 60 69 chr2 218393332 218394031 -34862552 - L1ME3A LINE L1 -1910 4236 3544 21 0 0 0 chr2 218394133 218394154 -34862429 + AT_rich Low_complexity Low_complexity 1 21 0 201 74 0 0 chr2 218394541 218394568 -34862015 + (GAAAA)n Simple_repeat Simple_repeat 3 29 0 1765 273 41 25 chr2 218395196 218395976 -34860607 + L2 LINE L2 2510 3301 -12 28 0 0 0 chr2 218396672 218396700 -34859883 + AT_rich Low_complexity Low_complexity 1 28 0 284 309 83 0 chr2 218396725 218396809 -34859774 - MIR3 SINE MIR -51 157 67 1841 115 49 21 chr2 218397493 218397780 -34858803 + AluSx SINE Alu 1 295 -17 2640 112 6 68 chr2 218397822 218398323 -34858260 - L1MA4A LINE L1 0 6303 5834 26 0 0 0 chr2 218398453 218398479 -34858104 + AT_rich Low_complexity Low_complexity 1 26 0 1323 151 14 5 chr2 218398498 218398716 -34857867 - AluJo SINE Alu -43 269 50 805 157 13 0 chr2 218398853 218399006 -34857577 + L1MA4A LINE L1 6042 6196 -107 1348 252 124 24 chr2 218399444 218399864 -34856719 + MLT1H1 LTR MaLR 71 532 -23 255 316 32 68 chr2 218400012 218400202 -34856381 + MLT1H1-int LTR MaLR 290 472 -899 256 204 184 29 chr2 218402970 218403073 -34853510 - L1MC5 LINE L1 -44 7917 7799 474 289 53 24 chr2 218403076 218403284 -34853299 - L1MC/D LINE L1 -2007 5801 5588 783 259 20 10 chr2 218403287 218403484 -34853099 + MLT1H LTR MaLR 1 199 -350 1534 140 100 22 chr2 218403488 218403759 -34852824 + THE1B LTR MaLR 73 364 0 268 261 0 98 chr2 218404033 218404125 -34852458 + L2 LINE L2 3226 3308 -5 309 252 54 27 chr2 218404734 218404845 -34851738 + MIR SINE MIR 34 147 -115 398 211 323 8 chr2 218405065 218405198 -34851385 + MIR SINE MIR 83 257 -5 1320 155 53 12 chr2 218406659 218406709 -34849874 - MLT2C2 LTR ERVL 0 464 418 225 0 0 0 chr2 218406709 218406734 -34849849 + (GA)n Simple_repeat Simple_repeat 2 26 0 1320 155 53 12 chr2 218406734 218406928 -34849655 - MLT2C2 LTR ERVL -46 418 210 248 224 0 0 chr2 218406928 218406977 -34849606 - MLT2B3 LTR ERVL 0 554 506 325 68 68 14 chr2 218406985 218407059 -34849524 + (TAGA)n Simple_repeat Simple_repeat 3 80 0 2144 207 45 57 chr2 218407060 218407610 -34848973 - MLT2B3 LTR ERVL -20 515 1 1203 164 10 0 chr2 218407614 218407822 -34848761 - MLT2C2 LTR ERVL -254 210 1 271 333 21 0 chr2 218407830 218407923 -34848660 + MLT1L LTR MaLR 105 199 -416 405 225 0 0 chr2 218408018 218408098 -34848485 + MSTD LTR MaLR 1 80 -348 2213 167 184 52 chr2 218408098 218408791 -34847792 - LTR1B LTR ERV1 0 826 1 1417 191 41 41 chr2 218408791 218409105 -34847478 + MSTD LTR MaLR 76 389 -7 325 234 65 19 chr2 218409303 218409410 -34847173 + MLT1L LTR MaLR 497 608 -7 250 345 119 27 chr2 218409813 218410074 -34846509 + LTR16B LTR ERVL 174 458 -6 2274 110 0 0 chr2 218410146 218410447 -34846136 + AluSg SINE Alu 1 301 -9 22 0 0 0 chr2 218410447 218410469 -34846114 + AT_rich Low_complexity Low_complexity 1 22 0 253 277 89 18 chr2 218410482 218410594 -34845989 + MLT1K LTR MaLR 468 587 -1 609 257 0 0 chr2 218410785 218410964 -34845619 + (TA)n Simple_repeat Simple_repeat 2 180 0 314 296 23 0 chr2 218410969 218411057 -34845526 - L1MC4 LINE L1 -1339 6703 6614 325 311 0 0 chr2 218411071 218411161 -34845422 - L1MC4 LINE L1 -1339 6703 6614 350 153 0 0 chr2 218411213 218411272 -34845311 - L1P LINE L1 -955 5191 5133 212 163 0 20 chr2 218411272 218411321 -34845262 + (TA)n Simple_repeat Simple_repeat 1 48 0 363 289 158 12 chr2 218412573 218412902 -34843681 + L1MC4a LINE L1 5761 6137 -1671 327 271 71 65 chr2 218413326 218413481 -34843102 - L2 LINE L2 -8 3305 3150 666 217 46 79 chr2 218413496 218413582 -34843001 - LTR37A LTR ERV1 0 426 339 5462 82 4 7 chr2 218413582 218414325 -34842258 - L1PA14 LINE L1 -9 6152 5412 666 217 46 79 chr2 218414325 218414542 -34842041 - LTR37A LTR ERV1 -87 339 133 304 87 0 0 chr2 218415619 218415665 -34840918 - MADE1 DNA Mariner -34 46 1 21 57 0 0 chr2 218417332 218417367 -34839216 + AT_rich Low_complexity Low_complexity 1 35 0 519 277 85 13 chr2 218418280 218418515 -34838068 + L2 LINE L2 2807 3058 -255 369 221 157 108 chr2 218418518 218418767 -34837816 + MIR SINE MIR 1 261 -1 226 223 32 166 chr2 218419702 218419859 -34836724 + MIR SINE MIR 13 148 -114 656 174 0 0 chr2 218419861 218419970 -34836613 + FLAM_C SINE Alu 3 111 -32 926 150 29 104 chr2 218419975 218420099 -34836484 - L1M2 LINE L1 -734 5578 5479 2136 135 0 0 chr2 218420099 218420403 -34836180 - AluJo SINE Alu -8 304 1 926 150 29 104 chr2 218420403 218420518 -34836065 - L1M2 LINE L1 -833 5479 5357 2335 89 3 3 chr2 218420518 218420822 -34835761 - AluSx SINE Alu 0 312 9 25 0 0 0 chr2 218420834 218420859 -34835724 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr2 218421006 218421027 -34835556 + AT_rich Low_complexity Low_complexity 1 21 0 1265 128 17 104 chr2 218421780 218422068 -34834515 - L1M2 LINE L1 -780 5366 5104 360 173 49 0 chr2 218422072 218422153 -34834430 - L1M4 LINE L1 -1724 4422 4338 247 293 106 43 chr2 218422154 218422362 -34834221 - L1MCc LINE L1 -6127 296 76 186 43 0 0 chr2 218422388 218422411 -34834172 + (TTTTC)n Simple_repeat Simple_repeat 3 25 0 3583 172 29 11 chr2 218422427 218423125 -34833458 - MER67C LTR ERV1 0 710 1 268 329 0 24 chr2 218423417 218423499 -34833084 - MIR SINE MIR -21 241 162 334 322 63 23 chr2 218423872 218424046 -34832537 + L2 LINE L2 3132 3312 -1 195 365 0 0 chr2 218424123 218424186 -34832397 - MIR3 SINE MIR -31 177 115 1860 142 105 15 chr2 218425500 218425832 -34830751 + THE1B LTR MaLR 1 362 -2 11742 98 5 0 chr2 218425834 218427406 -34829177 + THE1B-int LTR MaLR 1 1580 0 800 92 25 0 chr2 218427407 218427526 -34829057 - THE1-int LTR MaLR -1222 358 237 1785 142 110 22 chr2 218427526 218427844 -34828739 + THE1B LTR MaLR 19 364 0 451 295 121 8 chr2 218427955 218428114 -34828469 - MIR SINE MIR -75 187 19 815 247 151 13 chr2 218428136 218428594 -34827989 - MER113 DNA MER1_type? 0 521 1 22 0 0 0 chr2 218428848 218428870 -34827713 + AT_rich Low_complexity Low_complexity 1 22 0 195 298 18 0 chr2 218428982 218429039 -34827544 - MIR SINE MIR -108 154 97 226 287 104 35 chr2 218429277 218429392 -34827191 + MIR SINE MIR 132 254 -8 202 291 25 0 chr2 218429403 218429482 -34827101 + (TAG)n Simple_repeat Simple_repeat 3 83 0 205 335 0 108 chr2 218429529 218429696 -34826887 - L2 LINE L2 -190 3082 2934 247 236 18 0 chr2 218430674 218430729 -34825854 - MIR3 SINE MIR -3 205 150 259 315 20 47 chr2 218432227 218432376 -34824207 - L2 LINE L2 0 3313 3169 271 288 76 38 chr2 218432381 218432513 -34824070 - L2 LINE L2 -225 3047 2911 791 77 31 23 chr2 218432611 218432741 -34823842 + L1PB2 LINE L1 6021 6151 0 612 145 0 0 chr2 218433008 218433139 -34823444 + (CTA)n Simple_repeat Simple_repeat 1 131 0 988 211 117 0 chr2 218433390 218433613 -34822970 - MLT1D LTR MaLR -42 463 215 709 231 56 10 chr2 218433862 218434057 -34822526 + MIR SINE MIR 1 204 -58 225 204 0 37 chr2 218434116 218434170 -34822413 - L1MC/D LINE L1 -363 5879 5828 251 351 65 43 chr2 218434844 218435029 -34821554 + MIR SINE MIR 4 192 -70 2176 117 27 0 chr2 218436338 218436638 -34819945 - AluSx SINE Alu -4 308 1 7138 42 30 0 chr2 218437346 218438217 -34818366 - MER11D LTR ERVK 0 897 1 740 130 8 16 chr2 218439464 218439587 -34816996 - L1MD2 LINE L1 -13 6346 6225 23 33 0 0 chr2 218439820 218439850 -34816733 + AT_rich Low_complexity Low_complexity 1 30 0 240 254 135 16 chr2 218439891 218440017 -34816566 + MIR SINE MIR 51 191 -71 252 173 96 0 chr2 218440757 218440806 -34815777 - LTR37A LTR ERV1 -242 184 131 1583 254 89 57 chr2 218440806 218441381 -34815202 + MLT1E LTR MaLR 1 593 0 210 370 0 12 chr2 218442372 218442453 -34814130 - MIR3 SINE MIR -119 89 10 1359 266 98 20 chr2 218442683 218443200 -34813383 - MLT1F1 LTR MaLR -1 566 13 1309 136 5 27 chr2 218443807 218444027 -34812556 + AluJo SINE Alu 87 301 -11 610 296 123 44 chr2 218444708 218445371 -34811212 + L2 LINE L2 2588 3312 -1 3442 115 23 19 chr2 218446528 218447104 -34809479 - LTR19B LTR ERV1 -2 578 1 3147 157 79 18 chr2 218447448 218448046 -34808537 - MER67B LTR ERV1 -27 634 1 296 242 208 20 chr2 218448150 218448299 -34808284 + MIR SINE MIR 83 259 -3 641 283 103 21 chr2 218449782 218450015 -34806568 - MIR SINE MIR -10 252 1 2294 96 0 0 chr2 218450059 218450351 -34806232 + AluY SINE Alu 1 292 -19 243 272 53 35 chr2 218450827 218450941 -34805642 + MIR SINE MIR 97 212 -50 346 327 47 0 chr2 218451248 218451355 -34805228 - L2 LINE L2 0 3272 3161 683 184 18 0 chr2 218451412 218451526 -34805057 - FLAM_A SINE Alu -17 116 1 330 298 53 48 chr2 218451672 218451860 -34804723 + Charlie8 DNA MER1_type 1 189 -2228 2600 36 0 0 chr2 218452303 218452612 -34803971 + L1PA5 LINE L1 5845 6153 -1 358 342 124 5 chr2 218452890 218453083 -34803500 - MIR SINE MIR -25 237 22 1048 217 73 83 chr2 218454255 218454363 -34802220 + L1MD3 LINE L1 7590 7698 -297 2400 90 0 0 chr2 218454363 218454664 -34801919 + AluSg SINE Alu 1 301 -9 1048 217 73 83 chr2 218454664 218454965 -34801618 + L1MD3 LINE L1 7698 7995 0 30 0 0 0 chr2 218455969 218455999 -34800584 + AT_rich Low_complexity Low_complexity 1 30 0 2738 97 19 30 chr2 218455999 218456101 -34800482 - L1PB3 LINE L1 -9 6145 6043 3327 128 17 15 chr2 218456101 218456625 -34799958 - MER1A DNA MER1_type 0 527 3 2738 97 19 30 chr2 218456625 218456954 -34799629 - L1PB3 LINE L1 -111 6043 5719 1503 160 25 3 chr2 218457324 218457606 -34798977 - L1MC1 LINE L1 -1 6612 6325 7804 217 31 26 chr2 218457610 218459880 -34796703 - L1MC1 LINE L1 -743 5683 3451 6354 91 22 19 chr2 218459880 218460794 -34795789 - L1PA10 LINE L1 0 6168 5245 2321 100 0 0 chr2 218460794 218461094 -34795489 - AluSx SINE Alu -4 308 9 6354 91 22 19 chr2 218461094 218461477 -34795106 - L1PA10 LINE L1 -923 5245 4865 7804 217 31 26 chr2 218461477 218461541 -34795042 - L1MC1 LINE L1 -2975 3451 3389 5308 145 17 4 chr2 218461563 218463052 -34793531 - L1PA16 LINE L1 -2 6164 4675 1342 227 0 3 chr2 218463053 218463366 -34793217 + L1 LINE L1 4299 4610 -1536 2962 259 2 5 chr2 218463367 218464193 -34792390 - L1MC1 LINE L1 -3016 3410 2587 * 3886 150 23 4 chr2 218464191 218464917 -34791666 - L1MC1 LINE L1 -4795 1631 892 406 286 29 0 chr2 218465452 218465557 -34791026 - MIR SINE MIR -58 204 97 197 288 91 45 chr2 218465817 218465949 -34790634 + L3 LINE CR1 1361 1498 -79 344 343 55 30 chr2 218466128 218466329 -34790254 + MLT1K LTR MaLR 14 219 -369 375 251 195 15 chr2 218466637 218466832 -34789751 - L2 LINE L2 -5 3308 3079 421 355 95 23 chr2 218466897 218467201 -34789382 - L2 LINE L2 -164 3149 2824 262 298 96 10 chr2 218467298 218467402 -34789181 - L2 LINE L2 -6 3266 3154 25 0 0 0 chr2 218468091 218468116 -34788467 + AT_rich Low_complexity Low_complexity 1 25 0 246 263 191 13 chr2 218469090 218469242 -34787341 - L1ME1 LINE L1 -23 6143 5965 308 203 14 0 chr2 218469278 218469347 -34787236 - L1ME1 LINE L1 -280 5884 5815 2465 141 51 10 chr2 218469347 218469758 -34786825 - MSTA LTR MaLR 0 428 1 5443 172 28 7 chr2 218469758 218471128 -34785455 - MSTA-int LTR MaLR 0 1651 1 2839 121 17 0 chr2 218471128 218471549 -34785034 - MSTA LTR MaLR 0 428 1 1221 233 39 39 chr2 218471551 218471886 -34784697 - L1ME1 LINE L1 -353 5813 5479 4341 212 54 68 chr2 218472362 218473422 -34783161 - L1ME1 LINE L1 -713 5449 4423 2131 125 7 3 chr2 218473422 218473719 -34782864 - AluSx SINE Alu -14 298 1 4341 212 54 68 chr2 218473719 218474371 -34782212 - L1ME1 LINE L1 -1739 4423 3763 31584 108 13 57 chr2 218474377 218474706 -34781877 - L1PA7 LINE L1 -6 6148 5806 2443 67 0 10 chr2 218474706 218475005 -34781578 - AluY SINE Alu -15 296 1 31584 108 13 57 chr2 218475005 218481113 -34775470 - L1PA7 LINE L1 -348 5806 6 3111 128 44 6 chr2 218481259 218481744 -34774839 - L1MA5A LINE L1 -12 6285 5777 231 36 0 0 chr2 218481744 218481772 -34774811 + (TA)n Simple_repeat Simple_repeat 1 28 0 3111 128 44 6 chr2 218481772 218481809 -34774774 - L1MA5A LINE L1 -520 5777 5743 1291 262 77 18 chr2 218481809 218482127 -34774456 - L1ME1 LINE L1 -2472 3674 3376 2011 141 3 3 chr2 218482127 218482425 -34774158 - AluSx SINE Alu -14 298 1 1291 262 77 18 chr2 218482425 218482732 -34773851 - L1ME1 LINE L1 -2770 3376 3012 353 185 86 0 chr2 218482731 218482812 -34773771 - L1MA3 LINE L1 -270 6035 5948 * 1676 112 8 4 chr2 218482812 218483079 -34773504 + L1MA4 LINE L1 6016 6283 -17 1278 204 21 37 chr2 218483100 218483253 -34773330 - L1ME1 LINE L1 -3112 3034 2880 512 206 0 0 chr2 218483253 218483355 -34773228 + L1PB4 LINE L1 6042 6143 -13 1278 204 21 37 chr2 218483355 218483584 -34772999 - L1ME1 LINE L1 -3266 2880 2658 357 248 34 11 chr2 218484051 218484172 -34772411 + L1ME2 LINE L1 5985 6108 -56 1835 148 14 7 chr2 218484172 218484462 -34772121 + AluSx SINE Alu 1 292 -20 357 248 34 11 chr2 218484462 218484476 -34772107 + L1ME2 LINE L1 6108 6120 -44 253 219 78 0 chr2 218484474 218484538 -34772045 + L1MEc LINE L1 1842 1910 -4486 * 528 165 78 0 chr2 218484598 218484713 -34771870 - AluSg/x SINE Alu -8 301 178 2826 193 127 2 chr2 218484733 218485364 -34771219 - MER52A LTR ERV1 -650 1105 396 418 111 0 16 chr2 218485364 218485449 -34771134 - Alu SINE Alu 0 311 235 746 178 19 78 chr2 218485454 218485707 -34770876 - MER52C LTR ERV1 -1107 171 1 816 173 75 108 chr2 218486977 218487375 -34769208 + Charlie1 DNA MER1_type 2346 2730 -31 14624 136 24 7 chr2 218487733 218489182 -34767401 + Tigger1 DNA MER2_type 1 1509 -909 723 96 22 0 chr2 218489182 218489318 -34767265 + (TA)n Simple_repeat Simple_repeat 2 140 0 14624 136 24 7 chr2 218489318 218490245 -34766338 + Tigger1 DNA MER2_type 1509 2418 0 3620 139 28 39 chr2 218490474 218490729 -34765854 + L1PA16 LINE L1 5525 5781 -385 2532 129 0 0 chr2 218490729 218491093 -34765490 - THE1B LTR MaLR 0 364 1 10207 109 48 7 chr2 218491093 218492610 -34763973 - THE1B-int LTR MaLR 0 1580 1 2398 139 0 6 chr2 218492610 218492976 -34763607 - THE1B LTR MaLR 0 364 1 3620 139 28 39 chr2 218492976 218493192 -34763391 + L1PA16 LINE L1 5779 5992 -174 2463 65 3 3 chr2 218493192 218493498 -34763085 + AluY SINE Alu 1 306 -5 3620 139 28 39 chr2 218493498 218493672 -34762911 + L1PA16 LINE L1 5992 6166 0 21 57 0 0 chr2 218494275 218494310 -34762273 + AT_rich Low_complexity Low_complexity 1 35 0 312 155 0 0 chr2 218494539 218494610 -34761973 + GA-rich Low_complexity Low_complexity 2 72 0 22 35 0 0 chr2 218494992 218495021 -34761562 + AT_rich Low_complexity Low_complexity 1 29 0 2423 72 0 13 chr2 218495253 218495558 -34761025 + AluY SINE Alu 1 301 -10 270 77 0 0 chr2 218495977 218496016 -34760567 - L1MC3 LINE L1 -169 7616 7578 3034 102 30 13 chr2 218496034 218496506 -34760077 - L1PA13 LINE L1 -6 6157 5678 450 196 29 36 chr2 218496924 218497062 -34759521 - LTR45 LTR ERV1 0 525 389 510 115 13 0 chr2 218497470 218497548 -34759035 + MADE1 DNA Mariner 1 79 -1 2221 196 42 67 chr2 218497689 218498255 -34758328 - MLT2B3 LTR ERVL -2 552 1 384 256 12 38 chr2 218499203 218499363 -34757220 + Tigger8 DNA MER2_type 226 381 -285 22 0 0 0 chr2 218499712 218499734 -34756849 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 218500196 218500224 -34756359 + AT_rich Low_complexity Low_complexity 1 28 0 276 281 52 83 chr2 218500545 218500650 -34755933 - MIR SINE MIR -56 206 108 1507 237 104 18 chr2 218500650 218501102 -34755481 + LTR16C LTR ERVL 1 491 0 276 281 52 83 chr2 218501102 218501178 -34755405 - MIR SINE MIR -154 108 31 1691 181 65 76 chr2 218503373 218503645 -34752938 - LTR40b LTR ERVL -4 458 192 2055 132 0 23 chr2 218503645 218503949 -34752634 - AluSp SINE Alu -16 297 1 1691 181 65 76 chr2 218503949 218504139 -34752444 - LTR40b LTR ERVL -270 192 1 1056 237 84 39 chr2 218504235 218504650 -34751933 + MLT2C2 LTR ERVL 1 438 -26 360 0 0 0 chr2 218504650 218504690 -34751893 + (TG)n Simple_repeat Simple_repeat 2 41 0 1056 237 84 39 chr2 218504690 218504712 -34751871 + MLT2C2 LTR ERVL 438 458 -6 636 265 104 9 chr2 218504744 218504974 -34751609 - MIR SINE MIR -10 252 1 1769 135 40 0 chr2 218504995 218505292 -34751291 - MER7A DNA MER2_type 0 346 40 507 280 49 21 chr2 218505292 218505578 -34751005 - L1M4c LINE L1 -4017 1955 1662 1925 151 14 0 chr2 218505649 218506025 -34750558 - L1MB1 LINE L1 -17 6172 5786 387 192 0 0 chr2 218506029 218506107 -34750476 + CT-rich Low_complexity Low_complexity 2 79 0 2109 136 0 7 chr2 218506136 218506438 -34750145 - AluSc SINE Alu -9 300 1 2276 113 0 3 chr2 218506447 218506747 -34749836 - AluSg SINE Alu -11 299 1 2921 278 70 27 chr2 218506777 218508630 -34747953 - L1M4c LINE L1 -4516 1375 9 3704 200 12 25 chr2 218508654 218509604 -34746979 + L1MC3 LINE L1 5210 5403 -743 222 86 0 86 chr2 218510706 218510764 -34745819 + (CAAAA)n Simple_repeat Simple_repeat 2 54 0 710 327 72 32 chr2 218511087 218511463 -34745120 + MLT1K LTR MaLR 18 408 -180 224 51 0 51 chr2 218511466 218511505 -34745078 + (TTTC)n Simple_repeat Simple_repeat 3 39 0 1927 135 9 18 chr2 218511505 218511832 -34744751 - L1PA16 LINE L1 0 6166 5843 3844 132 45 44 chr2 218512306 218513032 -34743551 - LTR8A LTR ERV1 0 727 1 241 216 20 0 chr2 218513288 218513339 -34743244 + MER5A DNA MER1_type 136 187 -2 200 319 143 34 chr2 218513350 218513469 -34743114 + MER5B DNA MER1_type 3 134 -44 2489 49 3 0 chr2 218513571 218513875 -34742708 - AluY SINE Alu -2 309 5 2035 77 7 4 chr2 218513963 218514236 -34742347 + AluSp SINE Alu 35 308 -5 247 358 0 0 chr2 218514256 218514337 -34742246 - L2 LINE L2 -20 3252 3172 192 77 0 0 chr2 218515017 218515043 -34741540 + (T)n Simple_repeat Simple_repeat 1 26 0 24 32 0 0 chr2 218515075 218515106 -34741477 + AT_rich Low_complexity Low_complexity 1 31 0 28 0 0 0 chr2 218515235 218515263 -34741320 + AT_rich Low_complexity Low_complexity 1 28 0 849 197 193 68 chr2 218515465 218515533 -34741050 - MLT1E1 LTR MaLR -1 653 595 2200 91 3 3 chr2 218515533 218515819 -34740764 + AluY SINE Alu 1 286 -25 849 197 193 68 chr2 218515819 218516266 -34740317 - MLT1E1 LTR MaLR -59 595 25 2079 148 32 51 chr2 218516266 218516822 -34739761 - MLT2A2 LTR ERVL 0 554 3 834 149 32 19 chr2 218516952 218517106 -34739477 + MLT1B LTR MaLR 1 156 -218 1890 129 45 55 chr2 218517159 218517538 -34739045 - THE1C LTR MaLR 0 375 1 7682 159 29 56 chr2 218517538 218519156 -34737427 - THE1C-int LTR MaLR 0 1580 6 2787 147 67 100 chr2 218519546 218520247 -34736336 - THE1-int LTR MaLR -899 681 4 967 183 5 0 chr2 218520261 218520447 -34736136 + MLT1B LTR MaLR 204 390 0 21 57 0 0 chr2 218520567 218520602 -34735981 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 218521013 218521034 -34735549 + AT_rich Low_complexity Low_complexity 1 21 0 21 82 0 0 chr2 218521389 218521438 -34735145 + AT_rich Low_complexity Low_complexity 1 49 0 1926 265 154 18 chr2 218521615 218521805 -34734778 - L2 LINE L2 0 3313 3150 2087 121 0 0 chr2 218521805 218522085 -34734498 + AluSx SINE Alu 1 280 -32 408 20 0 0 chr2 218522085 218522134 -34734449 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 1926 265 154 18 chr2 218522134 218523004 -34733579 - L2 LINE L2 -162 3151 2109 1951 161 161 24 chr2 218523053 218523551 -34733032 - LTR49 LTR ERV1 -29 566 1 814 275 44 25 chr2 218523551 218523867 -34732716 - L2 LINE L2 -1380 1934 1613 863 320 125 19 chr2 218524332 218524797 -34731786 - L2 LINE L2 -1797 1517 1004 2397 94 3 0 chr2 218525195 218525504 -34731079 + AluSp SINE Alu 2 311 -2 802 316 151 9 chr2 218525608 218526139 -34730444 - L2 LINE L2 -2452 862 257 250 293 0 0 chr2 218527101 218527200 -34729383 - TAR1 Satellite telomeric -1833 278 180 2800 170 19 24 chr2 218527292 218527880 -34728703 - LTR60 LTR ERV1 -1 585 1 379 289 215 0 chr2 218527880 218528001 -34728582 - MER91B DNA MER1_type -18 172 26 359 233 0 0 chr2 218528504 218528594 -34727989 + L1ME LINE L1 5684 5773 -348 22 0 0 0 chr2 218528664 218528686 -34727897 + AT_rich Low_complexity Low_complexity 1 22 0 1617 185 37 0 chr2 218528695 218528992 -34727591 + AluJb SINE Alu 3 310 -2 3634 174 8 6 chr2 218529441 218530068 -34726515 + L1M1 LINE L1 13 640 -6925 13270 151 24 9 chr2 218530070 218533634 -34722949 + L1M1 LINE L1 2725 6346 -1219 198 103 0 0 chr2 218533634 218533663 -34722920 + (TTCC)n Simple_repeat Simple_repeat 3 31 0 2077 127 40 9 chr2 218533905 218534376 -34722207 - L1P LINE L1 -736 5427 4949 4673 92 31 25 chr2 218534389 218534433 -34722150 + L1PA12 LINE L1 5444 5486 -682 2134 143 0 0 chr2 218534433 218534734 -34721849 + AluSx SINE Alu 1 301 -11 4673 92 31 25 chr2 218534734 218535060 -34721523 + L1PA12 LINE L1 5486 5809 -359 2313 92 3 3 chr2 218535060 218535363 -34721220 + AluSq SINE Alu 3 305 -8 4673 92 31 25 chr2 218535363 218535709 -34720874 + L1PA12 LINE L1 5809 6165 -3 275 222 37 25 chr2 218537009 218537090 -34719493 + MIR SINE MIR 38 119 -89 892 260 123 31 chr2 218538051 218538423 -34718160 + LTR33 LTR ERVL 81 519 -2 283 254 28 0 chr2 218538642 218538713 -34717870 + L2 LINE L2 3196 3268 -4 781 220 68 0 chr2 218539430 218539607 -34716976 + MER5A DNA MER1_type 1 189 0 239 279 16 0 chr2 218540432 218540493 -34716090 - MER5A DNA MER1_type 0 189 128 274 122 24 0 chr2 218541753 218541794 -34714789 + MLT1E1 LTR MaLR 1 42 -612 843 289 136 31 chr2 218541965 218543029 -34713554 + L1ME3A LINE L1 4507 5725 -445 234 0 0 0 chr2 218543029 218543055 -34713528 + (GGAA)n Simple_repeat Simple_repeat 3 28 0 843 289 136 31 chr2 218543055 218543215 -34713368 + L1ME3A LINE L1 5725 5867 -303 2873 9 0 3 chr2 218543224 218543542 -34713041 - AluYb8 SINE Alu -1 317 1 1639 201 98 16 chr2 218544534 218544970 -34711613 + MLT1C LTR MaLR 4 467 0 826 217 30 10 chr2 218544984 218545193 -34711390 - MLT1E1 LTR MaLR -60 594 317 907 205 23 0 chr2 218545221 218545392 -34711191 - MLT1E1 LTR MaLR -423 231 57 1002 136 181 0 chr2 218545749 218545948 -34710635 - MER46A DNA MER2_type 0 236 2 26 64 0 0 chr2 218545948 218545995 -34710588 + AT_rich Low_complexity Low_complexity 1 47 0 303 176 0 29 chr2 218546247 218546315 -34710268 - MLT2C1 LTR ERVL 0 520 455 222 37 0 0 chr2 218546358 218546385 -34710198 + (CCTA)n Simple_repeat Simple_repeat 1 27 0 1820 126 62 34 chr2 218546387 218546712 -34709871 - MLT2C1 LTR ERVL -51 346 13 227 202 12 0 chr2 218546925 218547009 -34709574 + (TA)n Simple_repeat Simple_repeat 1 85 0 1865 197 24 36 chr2 218547145 218547562 -34709021 + LTR52 LTR ERVL 1 412 -9 6059 179 8 6 chr2 218547968 218548964 -34707619 + L1PA15-16 LINE L1 2 999 -5850 490 194 19 19 chr2 218548967 218549070 -34707513 + LTR52 LTR ERVL 255 357 -64 * 732 180 31 0 chr2 218549063 218549191 -34707392 - MLT2C1 LTR ERVL -157 240 109 22 35 0 0 chr2 218549626 218549655 -34706928 + AT_rich Low_complexity Low_complexity 1 29 0 2217 102 13 0 chr2 218549854 218550158 -34706425 - AluSp SINE Alu -3 310 3 249 202 32 0 chr2 218550641 218550735 -34705848 - L1M LINE L1 -804 5360 5264 2660 220 24 40 chr2 218550787 218551459 -34705124 + MER67B LTR ERV1 1 661 0 3182 148 5 30 chr2 218551507 218552108 -34704475 + LTR60 LTR ERV1 1 586 0 38 93 0 0 chr2 218553232 218553340 -34703243 + AT_rich Low_complexity Low_complexity 1 108 0 4846 154 30 7 chr2 218553348 218554193 -34702390 + MER6 DNA MER2_type 2 865 0 25 0 0 0 chr2 218554238 218554263 -34702320 + AT_rich Low_complexity Low_complexity 1 25 0 1921 150 62 31 chr2 218554497 218554850 -34701733 - THE1B LTR MaLR 0 364 1 279 188 0 0 chr2 218554879 218554927 -34701656 + L1MC4a LINE L1 6540 6587 -1221 1933 223 140 44 chr2 218555014 218555065 -34701518 + L1MC5 LINE L1 6636 6681 -1280 1795 146 73 20 chr2 218555065 218555421 -34701162 - THE1C LTR MaLR 0 375 1 8965 157 9 35 chr2 218555421 218557041 -34699542 - THE1C-int LTR MaLR 0 1580 3 1781 170 43 32 chr2 218557043 218557414 -34699169 - THE1C LTR MaLR 0 375 1 1933 223 140 44 chr2 218557414 218558228 -34698355 + L1MC5 LINE L1 6681 7589 -372 6794 125 20 19 chr2 218558593 218559996 -34696587 + L1MA2 LINE L1 4899 6304 0 24 0 0 0 chr2 218559996 218560020 -34696563 + AT_rich Low_complexity Low_complexity 1 24 0 2179 66 52 7 chr2 218560029 218560316 -34696267 + AluY SINE Alu 1 300 -11 4581 211 47 30 chr2 218561294 218561719 -34694864 + L1MC4a LINE L1 6500 6916 -892 3460 138 2 11 chr2 218561719 218562250 -34694333 - MER1A DNA MER1_type -1 526 1 4581 211 47 30 chr2 218562250 218562668 -34693915 + L1MC4a LINE L1 6916 7325 -483 2737 164 4 17 chr2 218562668 218563137 -34693446 + MLT1C LTR MaLR 5 467 0 4581 211 47 30 chr2 218563137 218563661 -34692922 + L1MC4a LINE L1 7325 7808 0 225 0 0 0 chr2 218564330 218564355 -34692228 + (T)n Simple_repeat Simple_repeat 1 25 0 1638 239 107 29 chr2 218564750 218565331 -34691252 + MLT1E LTR MaLR 1 589 -4 270 274 36 0 chr2 218565868 218565952 -34690631 + MLT1I LTR MaLR 313 399 -10 273 153 51 17 chr2 218566030 218566089 -34690494 + L1ME4a LINE L1 5964 6024 -97 29 28 0 0 chr2 218566175 218566211 -34690372 + AT_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr2 218566862 218566887 -34689696 + AT_rich Low_complexity Low_complexity 1 25 0 13703 172 13 22 chr2 218566916 218569385 -34687198 - L1PB1 LINE L1 0 6151 3661 2458 76 0 0 chr2 218569385 218569689 -34686894 - AluY SINE Alu -7 304 1 13703 172 13 22 chr2 218569689 218570804 -34685779 - L1PB1 LINE L1 -2490 3661 2537 2219 113 3 7 chr2 218570804 218571114 -34685469 - AluSg SINE Alu -1 309 1 13703 172 13 22 chr2 218571114 218571339 -34685244 - L1PB1 LINE L1 -3614 2537 2374 2089 128 39 33 chr2 218571339 218571698 -34684885 + THE1B LTR MaLR 1 361 -3 13703 172 13 22 chr2 218571698 218571829 -34684754 - L1PB1 LINE L1 -3777 2374 2243 592 246 113 36 chr2 218571834 218572143 -34684440 - LTR15 LTR ERV1 -5 488 156 12118 118 63 49 chr2 218572338 218573122 -34683461 - L1PBa LINE L1 -3901 2962 2191 1961 140 0 10 chr2 218573122 218573422 -34683161 - AluSx SINE Alu -15 297 1 12118 118 63 49 chr2 218573422 218574873 -34681710 - L1PBa LINE L1 -4672 2191 694 255 61 0 0 chr2 218576038 218576071 -34680512 + (TG)n Simple_repeat Simple_repeat 1 33 0 260 391 18 0 chr2 218576853 218576949 -34679634 + MIR SINE MIR 8 115 -93 343 209 43 139 chr2 218577207 218577437 -34679146 - L1M4 LINE L1 -4342 2483 2276 387 0 0 0 chr2 218577486 218577529 -34679054 + (TA)n Simple_repeat Simple_repeat 2 44 0 281 274 83 49 chr2 218577554 218577923 -34678660 - L1M4 LINE L1 -4919 1623 1281 715 267 52 21 chr2 218577927 218578215 -34678368 - L1ME1 LINE L1 -107 5993 5697 * 4143 89 21 2 chr2 218578207 218578781 -34677802 - L1PA11 LINE L1 -2 6172 5588 709 230 22 104 chr2 218578786 218579142 -34677441 - L1ME1 LINE L1 -1404 4676 4350 1933 86 11 0 chr2 218579149 218579429 -34677154 - L1MA2 LINE L1 0 6304 6022 782 298 91 7 chr2 218579431 218579716 -34676867 - L1ME1 LINE L1 -5442 628 320 21 0 0 0 chr2 218580588 218580609 -34675974 + AT_rich Low_complexity Low_complexity 1 21 0 304 327 20 10 chr2 218581374 218581475 -34675108 - MIR3 SINE MIR -39 169 68 322 360 0 9 chr2 218581663 218581777 -34674806 + MIR SINE MIR 19 131 -131 23 33 0 0 chr2 218581803 218581833 -34674750 + AT_rich Low_complexity Low_complexity 1 30 0 423 267 11 88 chr2 218586459 218586693 -34669890 - MLT1H LTR MaLR -101 308 98 2401 155 31 12 chr2 218587437 218587857 -34668726 + MSTA LTR MaLR 1 428 0 520 256 156 6 chr2 218588140 218588300 -34668283 - MER5A DNA MER1_type -2 187 4 1161 243 158 42 chr2 218588681 218589155 -34667428 + MLT1H LTR MaLR 21 549 0 5179 184 26 4 chr2 218589339 218590877 -34665706 - L1PA16 LINE L1 -9 6157 4594 209 273 208 0 chr2 218591646 218591723 -34664860 - L2 LINE L2 -1 3312 3220 2512 137 48 17 chr2 218591786 218592262 -34664321 + L1MB2 LINE L1 5679 6169 -2 240 163 0 0 chr2 218592938 218592981 -34663602 + (TA)n Simple_repeat Simple_repeat 1 43 0 365 281 0 0 chr2 218592982 218593071 -34663512 - L1MC4 LINE L1 -1339 6703 6615 350 153 0 0 chr2 218593106 218593165 -34663418 + L1P LINE L1 5133 5191 -955 325 311 0 0 chr2 218593217 218593307 -34663276 + L1MC4 LINE L1 6614 6703 -1339 314 296 23 0 chr2 218593321 218593409 -34663174 + L1MC4 LINE L1 6614 6703 -1339 708 240 0 0 chr2 218593414 218593593 -34662990 + (TA)n Simple_repeat Simple_repeat 2 180 0 513 257 0 0 chr2 218593609 218593761 -34662822 + (TA)n Simple_repeat Simple_repeat 2 153 0 253 277 89 18 chr2 218593924 218594036 -34662547 - MLT1K LTR MaLR -1 587 468 22 0 0 0 chr2 218594049 218594071 -34662512 + AT_rich Low_complexity Low_complexity 1 22 0 1647 151 7 14 chr2 218594071 218594355 -34662228 - AluSg SINE Alu -9 301 20 261 242 48 0 chr2 218594684 218594746 -34661837 + MIR SINE MIR 75 139 -123 245 415 0 8 chr2 218595552 218595675 -34660908 - MIR3 SINE MIR -81 127 6 381 287 85 0 chr2 218595741 218595870 -34660713 + MIR SINE MIR 71 210 -52 42209 39 22 1 chr2 218596348 218602373 -34654210 + L1PA2 LINE L1 1 6155 0 60 27 0 0 chr2 218602428 218602502 -34654081 + AT_rich Low_complexity Low_complexity 1 74 0 29 0 0 0 chr2 218603242 218603271 -34653312 + AT_rich Low_complexity Low_complexity 1 29 0 15071 216 55 10 chr2 218603868 218609753 -34646830 - L1P4 LINE L1 -708 6161 2 1682 163 58 30 chr2 218610103 218610465 -34646118 + THE1C LTR MaLR 1 372 -3 4963 241 50 63 chr2 218612312 218613848 -34642735 + L1ME1 LINE L1 2827 4323 -1823 1766 178 3 15 chr2 218613848 218614190 -34642393 - L1PA13 LINE L1 -7 6156 5819 4963 241 50 63 chr2 218614190 218614940 -34641643 + L1ME1 LINE L1 4323 5082 -1064 396 172 23 23 chr2 218614945 218615032 -34641551 + MER106A DNA MER1_type 6 92 -144 276 232 126 0 chr2 218615031 218615126 -34641457 + MER106B DNA MER1_type 953 1059 0 * 2937 229 58 30 chr2 218615127 218616177 -34640406 + L1ME1 LINE L1 5076 6163 -3 43639 41 2 2 chr2 218616326 218622477 -34634106 - L1PA3 LINE L1 -1 6154 1 4748 172 40 69 chr2 218622818 218623364 -34633219 - L1MB1 LINE L1 -132 6036 5476 583 235 9 0 chr2 218623364 218623479 -34633104 - FLAM_C SINE Alu -15 118 3 4748 172 40 69 chr2 218623479 218624894 -34631689 - L1MB1 LINE L1 -692 5476 4121 1003 154 4 114 chr2 218624940 218625213 -34631370 + L1MA10 LINE L1 6081 6323 -11 25 0 0 0 chr2 218625304 218625329 -34631254 + AT_rich Low_complexity Low_complexity 1 25 0 56 0 0 0 chr2 218625416 218625472 -34631111 + AT_rich Low_complexity Low_complexity 1 56 0 27 73 0 0 chr2 218625965 218626020 -34630563 + AT_rich Low_complexity Low_complexity 1 55 0 218 259 74 0 chr2 218626428 218626482 -34630101 - L2 LINE L2 0 3313 3256 218 93 0 23 chr2 218626819 218626862 -34629721 + (TCTA)n Simple_repeat Simple_repeat 3 44 0 262 307 59 10 chr2 218627553 218627654 -34628929 + LTR33A LTR ERVL 418 523 0 14320 43 4 10 chr2 218627932 218628725 -34627858 - L1PA5 LINE L1 -1 6153 5357 2147 102 7 7 chr2 218628725 218629018 -34627565 - AluY SINE Alu -14 297 5 14320 43 4 10 chr2 218629018 218630811 -34625772 - L1PA5 LINE L1 -797 5357 3577 34986 54 5 6 chr2 218630811 218636115 -34620468 + L1PA5 LINE L1 849 6144 -10 243 103 0 0 chr2 218636115 218636154 -34620429 + (TA)n Simple_repeat Simple_repeat 1 39 0 812 258 16 0 chr2 218636753 218636939 -34619644 + MER5A DNA MER1_type 1 189 0 210 118 0 0 chr2 218637013 218637047 -34619536 + (TG)n Simple_repeat Simple_repeat 2 35 0 198 0 0 0 chr2 218637313 218637335 -34619248 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 322 284 39 13 chr2 218637917 218638072 -34618511 + MARNA DNA Mariner 193 351 -235 466 323 82 13 chr2 218638166 218638304 -34618279 + MIR SINE MIR 3 165 -97 2624 89 8 8 chr2 218638304 218638665 -34617918 + THE1B LTR MaLR 4 364 0 466 323 82 13 chr2 218638665 218638758 -34617825 + MIR SINE MIR 165 250 -12 236 75 0 25 chr2 218638768 218638808 -34617775 + (TG)n Simple_repeat Simple_repeat 2 40 0 248 278 31 0 chr2 218640261 218640358 -34616225 - L1ME2 LINE L1 -202 5962 5863 817 282 42 81 chr2 218640529 218641057 -34615526 + L1ME3A LINE L1 5377 5883 -287 306 318 144 0 chr2 218641186 218641359 -34615224 + L1M4 LINE L1 3692 3889 -2257 323 352 51 6 chr2 218641518 218641694 -34614889 + L1M4 LINE L1 4132 4315 -1831 402 241 35 14 chr2 218641771 218641912 -34614671 + L1M4 LINE L1 4872 5015 -1131 1233 112 0 0 chr2 218641925 218642086 -34614497 - AluSp SINE Alu -11 302 142 356 311 67 21 chr2 218642599 218642792 -34613791 + L1 LINE L1 4133 4334 -1812 46 0 0 0 chr2 218642978 218643024 -34613559 + AT_rich Low_complexity Low_complexity 1 46 0 213 204 0 58 chr2 218643024 218643127 -34613456 + T-rich Low_complexity Low_complexity 2 98 0 16689 34 0 0 chr2 218643250 218646087 -34610496 + L1PA3 LINE L1 3301 6152 -3 32 43 0 0 chr2 218646142 218646188 -34610395 + AT_rich Low_complexity Low_complexity 1 46 0 316 205 376 8 chr2 218646497 218646614 -34609969 + L2 LINE L2 1759 1918 -1396 780 313 116 18 chr2 218646615 218647122 -34609461 + L2 LINE L2 2477 3273 -40 4008 59 4 0 chr2 218647266 218647771 -34608812 - L1PA7 LINE L1 -3 6151 5645 1976 87 4 0 chr2 218647771 218648035 -34608548 + L1PA7 LINE L1 5375 5639 -515 1541 164 35 9 chr2 218648118 218648435 -34608148 + L1MC/D LINE L1 5254 5578 -664 2466 228 40 17 chr2 218648938 218649538 -34607045 - L1MD2 LINE L1 -11 6348 5735 35 78 0 0 chr2 218649566 218649643 -34606940 + AT_rich Low_complexity Low_complexity 1 77 0 25 0 0 0 chr2 218649799 218649824 -34606759 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr2 218650130 218650151 -34606432 + AT_rich Low_complexity Low_complexity 1 21 0 362 309 33 62 chr2 218650197 218650440 -34606143 - HAL1b LINE L1 -835 513 278 297 0 0 0 chr2 218652124 218652157 -34604426 + (CA)n Simple_repeat Simple_repeat 1 33 0 2128 102 3 3 chr2 218652200 218652485 -34604098 - AluSg SINE Alu -25 285 1 409 228 80 129 chr2 218653036 218653299 -34603284 + MER102a DNA MER1_type 81 330 0 43459 47 2 4 chr2 218654049 218660216 -34596367 + L1PA4 LINE L1 2 6152 -3 446 257 53 13 chr2 218661084 218661232 -34595351 - L1ME1 LINE L1 -1 6333 6021 1526 219 38 63 chr2 218661245 218661623 -34594960 - L1MD2 LINE L1 -440 5726 5359 2339 101 0 0 chr2 218661623 218661920 -34594663 - AluY SINE Alu -14 297 1 1526 219 38 63 chr2 218661920 218661988 -34594595 - L1MD2 LINE L1 -807 5359 5291 883 245 58 30 chr2 218661991 218662354 -34594229 + L1M4 LINE L1 4321 4693 -1453 429 308 61 5 chr2 218662365 218662489 -34594094 - L1MD2 LINE L1 -2336 3810 3670 1927 141 10 7 chr2 218662489 218662794 -34593789 - AluSq SINE Alu -7 306 1 429 308 61 5 chr2 218662794 218662867 -34593716 - L1MD2 LINE L1 -2476 3670 3602 * 1017 287 53 10 chr2 218662863 218663257 -34593326 + L1ME1 LINE L1 4687 5097 -1049 1102 263 168 14 chr2 218663259 218663300 -34593283 - MLT2B1 LTR ERVL 0 488 455 228 67 0 0 chr2 218663300 218663330 -34593253 + (TA)n Simple_repeat Simple_repeat 1 30 0 1102 263 168 14 chr2 218663330 218663725 -34592858 - MLT2B1 LTR ERVL -33 455 1 2795 237 20 67 chr2 218663759 218664834 -34591749 + L1ME1 LINE L1 5125 6151 -15 841 270 113 19 chr2 218664858 218665250 -34591333 + L1MC4 LINE L1 7377 7815 -227 2189 121 3 3 chr2 218665250 218665556 -34591027 - AluSg SINE Alu -4 306 1 841 270 113 19 chr2 218665556 218665596 -34590987 + L1MC4 LINE L1 7815 7850 -192 1355 174 179 75 chr2 218665732 218666156 -34590427 + MLT1D LTR MaLR 1 468 -37 22 35 0 0 chr2 218666213 218666242 -34590341 + AT_rich Low_complexity Low_complexity 1 29 0 27 29 0 0 chr2 218667121 218667155 -34589428 + AT_rich Low_complexity Low_complexity 1 34 0 21 36 0 0 chr2 218667219 218667247 -34589336 + AT_rich Low_complexity Low_complexity 1 28 0 231 186 0 0 chr2 218669192 218669235 -34587348 + (TG)n Simple_repeat Simple_repeat 2 44 0 387 0 0 0 chr2 218669554 218669597 -34586986 + (TG)n Simple_repeat Simple_repeat 2 44 0 43767 44 2 1 chr2 218670432 218676583 -34580000 + L1PA3 LINE L1 2 6150 -5 202 163 20 20 chr2 218676926 218676975 -34579608 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 33494 40 34 2 chr2 218729412 218733884 -34522699 - L1P LINE L1 -910 5236 621 1072 50 7 0 chr2 218733880 218734020 -34522563 - L1P LINE L1 -6004 142 2 * 1216 151 30 15 chr2 218734020 218734285 -34522298 - HERVH LTR ERV1 -7344 369 101 1732 96 7 0 chr2 218734469 218734740 -34521843 - HERVH LTR ERV1 -7440 273 1 2573 85 123 0 chr2 218734742 218735141 -34521442 - LTR7 LTR ERV1 -2 448 1 700 188 119 62 chr2 218735141 218735492 -34521091 + MLT1C LTR MaLR 44 390 0 32 67 0 0 chr2 218735606 218735666 -34520917 + AT_rich Low_complexity Low_complexity 1 60 0 654 277 55 46 chr2 218735688 218736035 -34520548 - L1MC4a LINE L1 -1872 5936 5587 980 177 165 16 chr2 218736036 218736285 -34520298 + MLT1D LTR MaLR 220 505 0 309 338 20 1 chr2 218736763 218736875 -34519708 + MIR SINE MIR 38 149 -60 249 245 281 14 chr2 218737071 218737136 -34519447 + MIR SINE MIR 81 127 -135 2195 133 37 6 chr2 218737136 218737489 -34519094 - THE1B LTR MaLR 0 364 1 249 245 281 14 chr2 218737489 218737562 -34519021 + MIR SINE MIR 127 256 -6 295 271 83 39 chr2 218738053 218738234 -34518349 + MER110 LTR ERV1 268 456 -35 1070 278 49 0 chr2 218738495 218738801 -34517782 + MER69 DNA AcHobo 209 529 -697 930 218 91 21 chr2 218738824 218739163 -34517420 + MER69 DNA AcHobo 2163 2525 -1 1540 91 26 0 chr2 218741540 218741770 -34514813 - L1PA13 LINE L1 -3 6160 5925 4453 169 9 1 chr2 218741771 218742583 -34514000 - L1P LINE L1 -1075 5071 4254 207 0 0 0 chr2 218743013 218743036 -34513547 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 887 68 25 50 chr2 218743991 218744152 -34512431 + HERVH LTR ERV1 7557 7713 0 2522 83 134 0 chr2 218744152 218744547 -34512036 + LTR7 LTR ERV1 1 448 -2 450 288 39 101 chr2 218744787 218745000 -34511583 + L1MC4a LINE L1 6391 6581 -1227 207 0 0 0 chr2 218745000 218745023 -34511560 + (TG)n Simple_repeat Simple_repeat 2 24 0 450 288 39 101 chr2 218745023 218745115 -34511468 + L1MC4a LINE L1 6581 6677 -1131 2389 136 48 2 chr2 218745166 218745564 -34511019 + L1PBa LINE L1 3 418 -6445 5859 104 18 3 chr2 218745573 218746989 -34509594 + L1PBa LINE L1 604 2191 -4672 3072 77 0 39 chr2 218746989 218747455 -34509128 + LTR7 LTR ERV1 1 448 -2 985 242 65 17 chr2 218747455 218747806 -34508777 + L1PBa LINE L1 2185 2552 -4311 5596 109 19 21 chr2 218748150 218749050 -34507533 + HERVH LTR ERV1 2098 2995 -4718 1013 125 19 0 chr2 218749019 218749179 -34507404 + HERVH LTR ERV1 3128 3290 -4423 * 3533 95 2 6 chr2 218749169 218749673 -34506910 + HERVH LTR ERV1 3492 3993 -3720 2923 102 12 9 chr2 218749690 218750143 -34506440 + HERVH LTR ERV1 3994 4589 -3130 4736 138 23 36 chr2 218750277 218751244 -34505339 - HERVH LTR ERV1 -6276 1437 362 7204 26 3 3 chr2 218751279 218752147 -34504436 - L1PA2 LINE L1 0 6155 5288 4085 85 11 0 chr2 218752267 218752830 -34503753 - THE1B-int LTR MaLR -1011 569 1 1939 158 15 21 chr2 218752830 218753166 -34503417 - THE1B LTR MaLR 0 364 31 3680 147 38 12 chr2 218753433 218753761 -34502822 + L1PB4 LINE L1 5456 5774 -382 405 0 0 0 chr2 218753761 218753806 -34502777 + (CA)n Simple_repeat Simple_repeat 2 46 0 3680 147 38 12 chr2 218753806 218754158 -34502425 + L1PB4 LINE L1 5774 6154 -2 570 317 62 45 chr2 218754160 218754627 -34501956 + ERVL LTR ERVL 4552 5026 -738 21 82 0 0 chr2 218755300 218755349 -34501234 + AT_rich Low_complexity Low_complexity 1 49 0 301 370 94 0 chr2 218755415 218755542 -34501041 - MIR3 SINE MIR -6 202 64 24 32 0 0 chr2 218756051 218756082 -34500501 + AT_rich Low_complexity Low_complexity 1 31 0 5801 120 5 15 chr2 218756083 218757001 -34499582 - L1MA2 LINE L1 -2 6302 5394 763 146 15 0 chr2 218757014 218757144 -34499439 + L1PA16 LINE L1 6026 6157 -9 323 122 0 0 chr2 218757185 218757234 -34499349 - L1M1 LINE L1 -707 5597 5549 948 290 94 33 chr2 218758282 218758842 -34497741 + MLT1G1 LTR MaLR 5 585 -5 565 288 109 0 chr2 218758847 218759149 -34497434 - Charlie2 DNA MER1_type -32 2830 2496 228 268 0 0 chr2 218759790 218759846 -34496737 + (TA)n Simple_repeat Simple_repeat 1 56 0 231 225 109 29 chr2 218760274 218760412 -34496171 - L1ME4a LINE L1 -157 5964 5816 777 293 53 44 chr2 218760759 218761171 -34495412 + MLT1J LTR MaLR 62 477 -34 1813 156 31 98 chr2 218761171 218761589 -34494994 - MLT1B LTR MaLR 0 390 1 36 0 0 0 chr2 218761942 218761978 -34494605 + AT_rich Low_complexity Low_complexity 1 36 0 239 365 0 0 chr2 218763174 218763259 -34493324 - MLT1K LTR MaLR -324 264 180 709 232 51 34 chr2 218766541 218766718 -34489865 + MIR SINE MIR 68 247 -15 1103 210 4 16 chr2 218767566 218767809 -34488774 + MLT1A2 LTR MaLR 135 374 0 1990 103 6 55 chr2 218768441 218768752 -34487831 + AluSx SINE Alu 1 296 -16 342 236 76 44 chr2 218768793 218768971 -34487612 - MLT1I LTR MaLR -240 309 87 738 291 141 45 chr2 218768979 218769584 -34486999 + LTR50 LTR ERVL 16 678 -117 595 294 48 29 chr2 218769712 218769984 -34486599 + MERVL LTR ERVL 5059 5335 -150 887 182 0 0 chr2 218770142 218770290 -34486293 + MLT1A1 LTR MaLR 218 365 0 429 155 134 0 chr2 218771492 218771589 -34484994 - L1M4 LINE L1 -2964 3182 3073 401 314 144 5 chr2 218774215 218774409 -34482174 + MIR SINE MIR 3 223 -39 21 36 0 0 chr2 218775535 218775563 -34481020 + AT_rich Low_complexity Low_complexity 1 28 0 2071 96 40 13 chr2 218776119 218776421 -34480162 - AluY SINE Alu -1 310 1 22 35 0 0 chr2 218776868 218776897 -34479686 + AT_rich Low_complexity Low_complexity 1 29 0 14291 117 59 12 chr2 218776914 218777842 -34478741 - LOR1b-int LTR ERV1 -5123 2997 2114 210 37 0 0 chr2 218777842 218777869 -34478714 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 14291 117 59 12 chr2 218777869 218779935 -34476648 - LOR1b-int LTR ERV1 -6006 2114 1 2174 182 17 27 chr2 218779943 218780164 -34476419 - LOR1b LTR ERV1 -8 453 231 1810 160 52 19 chr2 218780164 218780527 -34476056 + THE1C LTR MaLR 1 375 0 2174 182 17 27 chr2 218780527 218780667 -34475916 - LOR1b LTR ERV1 -230 231 93 2135 109 0 0 chr2 218780667 218780963 -34475620 - AluSg SINE Alu 0 304 9 2174 182 17 27 chr2 218780963 218781006 -34475577 - LOR1b LTR ERV1 -368 93 51 5279 135 52 26 chr2 218781050 218782401 -34474182 - LOR1-int LTR ERV1 -5581 2235 1283 19299 186 41 11 chr2 218782411 218786824 -34469759 + L1P4 LINE L1 1474 6029 -785 2276 108 3 0 chr2 218786824 218787131 -34469452 + AluSx SINE Alu 1 308 -4 19299 186 41 11 chr2 218787131 218787523 -34469060 + L1P4 LINE L1 6029 6408 -406 13789 99 18 4 chr2 218787709 218790516 -34466067 + L1PA7 LINE L1 3316 6149 -5 387 214 100 39 chr2 218790497 218790726 -34465857 + L1MC5 LINE L1 7465 7707 -254 * 303 278 32 48 chr2 218791139 218791265 -34465318 + MER5B DNA MER1_type 7 130 -48 182 208 19 0 chr2 218791359 218791412 -34465171 + GA-rich Low_complexity Low_complexity 2 55 0 504 291 74 11 chr2 218791423 218791598 -34464985 - MLT1K LTR MaLR -88 500 315 254 294 56 16 chr2 218791601 218791727 -34464856 + MIR SINE MIR 132 262 0 3035 196 55 2 chr2 218792092 218792711 -34463872 + MER82 DNA MER2_type 1 652 -1 278 226 24 0 chr2 218792869 218792953 -34463630 + GA-rich Low_complexity Low_complexity 3 88 0 24 0 0 0 chr2 218793851 218793875 -34462708 + AT_rich Low_complexity Low_complexity 1 24 0 13433 202 25 31 chr2 218794431 218796922 -34459661 + L1PB1 LINE L1 2183 4728 -2139 1957 180 67 17 chr2 218796922 218797399 -34459184 + LTR22 LTR ERVK 5 505 -4 13433 202 25 31 chr2 218797399 218799066 -34457517 + L1PB1 LINE L1 4728 6403 -464 261 0 0 0 chr2 218799073 218799102 -34457481 + (CA)n Simple_repeat Simple_repeat 2 30 0 2562 106 0 0 chr2 218799107 218799465 -34457118 + L1PB1 LINE L1 6509 6866 -1 3011 102 4 25 chr2 218799868 218800348 -34456235 + L1PA13 LINE L1 5694 6163 0 3033 147 65 87 chr2 218800362 218800747 -34455836 - LOR1a-int LTR ERV1 -363 1423 1031 245 213 21 0 chr2 218800747 218800794 -34455789 - 5S rRNA rRNA -71 50 3 3033 147 65 87 chr2 218800794 218801102 -34455481 - LOR1a-int LTR ERV1 -755 1031 200 1888 172 66 3 chr2 218801111 218801460 -34455123 - LOR1a-int LTR ERV1 -7749 371 1 3241 117 18 6 chr2 218801463 218801951 -34454632 - LOR1a LTR ERV1 -3 494 1 221 365 85 34 chr2 218803652 218804098 -34452485 + L2 LINE L2 1837 2374 -940 746 288 0 23 chr2 218804334 218804549 -34452034 - HERVL LTR ERVL -780 4874 4665 679 349 141 33 chr2 218804558 218805470 -34451113 - L2 LINE L2 -379 2935 1925 22 70 0 0 chr2 218808104 218808147 -34448436 + AT_rich Low_complexity Low_complexity 1 43 0 288 176 0 11 chr2 218808704 218808767 -34447816 + MLT1J LTR MaLR 59 156 -332 351 93 0 0 chr2 218808786 218808840 -34447743 - MADE1 DNA Mariner -26 54 1 1620 199 0 7 chr2 218809367 218809658 -34446925 + AluJb SINE Alu 1 289 -23 555 361 40 7 chr2 218809701 218810000 -34446583 - LTR16C LTR ERVL -110 381 73 207 139 0 0 chr2 218810160 218810196 -34446387 + (TAA)n Simple_repeat Simple_repeat 2 37 0 1144 85 13 0 chr2 218810196 218810349 -34446234 + AluYa5 SINE Alu 149 303 -8 484 271 57 27 chr2 218810855 218811154 -34445429 - L1M4 LINE L1 -2400 4557 4250 715 154 7 15 chr2 218811224 218811360 -34445223 - L1PA5 LINE L1 0 6154 6020 579 144 0 0 chr2 218813068 218813165 -34443418 + (TTCCC)n Simple_repeat Simple_repeat 4 100 0 207 139 0 0 chr2 218813162 218813198 -34443385 + (TTTC)n Simple_repeat Simple_repeat 2 37 0 * 2019 145 7 0 chr2 218813200 218813510 -34443073 - AluSx SINE Alu 0 312 1 288 327 31 75 chr2 218814511 218814737 -34441846 + MLT1L LTR MaLR 328 543 -72 321 226 32 73 chr2 218814921 218815045 -34441538 + L1MEc LINE L1 44 162 -6234 2244 161 87 3 chr2 218815062 218815453 -34441130 + MSTB LTR MaLR 1 424 -2 665 248 92 14 chr2 218815465 218815683 -34440900 + L1MEc LINE L1 177 411 -5985 277 349 42 14 chr2 218816063 218816278 -34440305 + L1ME LINE L1 5564 5784 -378 414 0 0 0 chr2 218816515 218816561 -34440022 + (TG)n Simple_repeat Simple_repeat 2 47 0 217 290 16 0 chr2 218816692 218816754 -34439829 + MIR3 SINE MIR 146 208 0 2011 97 7 4 chr2 218818406 218818684 -34437899 + AluSc SINE Alu 1 279 -30 580 306 9 22 chr2 218819335 218819567 -34437016 + L1MCb LINE L1 3 231 -5814 346 225 0 0 chr2 218819570 218819641 -34436942 - MIR SINE MIR -70 192 122 563 185 70 45 chr2 218819696 218819853 -34436730 + MER63 DNA MER1_type 2 788 -274 286 261 126 27 chr2 218820120 218820231 -34436352 + MIR SINE MIR 2 123 -139 43 56 0 0 chr2 218821728 218821799 -34434784 + AT_rich Low_complexity Low_complexity 1 71 0 1142 263 71 36 chr2 218822052 218822840 -34433743 - L1M4 LINE L1 -3595 3362 2589 1522 250 63 39 chr2 218823188 218824044 -34432539 - L1M4 LINE L1 -4577 2382 1507 * 1572 260 56 73 chr2 218824041 218824496 -34432087 - L1M4 LINE L1 -6324 535 89 447 35 0 0 chr2 218824496 218824553 -34432030 + (TG)n Simple_repeat Simple_repeat 2 58 0 1572 260 56 73 chr2 218824553 218824631 -34431952 - L1M4 LINE L1 -6770 89 11 34 0 0 0 chr2 218825586 218825620 -34430963 + AT_rich Low_complexity Low_complexity 1 34 0 608 337 27 18 chr2 218826003 218826294 -34430289 + MLT1K LTR MaLR 255 551 -37 2111 78 19 13 chr2 218826294 218826603 -34429980 - AluY SINE Alu 0 311 1 608 337 27 18 chr2 218826603 218826640 -34429943 + MLT1K LTR MaLR 551 586 -2 1547 201 42 11 chr2 218826680 218827034 -34429549 - MLT1A1 LTR MaLR 0 365 1 225 224 17 0 chr2 218827167 218827225 -34429358 + (TA)n Simple_repeat Simple_repeat 2 60 0 1289 278 60 36 chr2 218827712 218828540 -34428043 + L1M4 LINE L1 2877 3724 -2422 186 43 0 0 chr2 218828540 218828563 -34428020 + (CA)n Simple_repeat Simple_repeat 2 24 0 615 322 35 28 chr2 218828655 218828910 -34427673 + MIR SINE MIR 3 259 -3 222 118 0 0 chr2 218828911 218828945 -34427638 + (CAT)n Simple_repeat Simple_repeat 3 36 0 203 30 0 61 chr2 218829406 218829439 -34427144 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 1770 144 68 0 chr2 218829453 218829716 -34426867 - AluSx SINE Alu -30 282 2 4541 62 0 0 chr2 218829979 218830545 -34426038 - L1PA7 LINE L1 -8 6146 5581 8055 72 1 2 chr2 218830545 218831842 -34424741 + L1PA7 LINE L1 4289 5584 -570 21 36 0 0 chr2 218831935 218831963 -34424620 + AT_rich Low_complexity Low_complexity 1 28 0 1495 211 13 0 chr2 218832629 218832933 -34423650 - AluJb SINE Alu -4 308 1 192 77 0 0 chr2 218833149 218833175 -34423408 + (GAAA)n Simple_repeat Simple_repeat 2 27 0 21 0 0 0 chr2 218833248 218833269 -34423314 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 218833617 218833645 -34422938 + AT_rich Low_complexity Low_complexity 1 28 0 2733 164 4 20 chr2 218834619 218835113 -34421470 + MER66B LTR ERV1 1 486 0 526 235 45 83 chr2 218835806 218835869 -34420714 - L1MC5 LINE L1 -382 7579 7515 2239 209 28 24 chr2 218835869 218836372 -34420211 - MLT1D LTR MaLR 0 505 1 526 235 45 83 chr2 218836372 218836553 -34420030 - L1MC5 LINE L1 -446 7515 7349 750 214 40 10 chr2 218836553 218836754 -34419829 - MER3 DNA MER1_type -1 208 2 526 235 45 83 chr2 218836754 218836844 -34419739 - L1MC5 LINE L1 -612 7349 7257 719 211 82 101 chr2 218837062 218837530 -34419053 - L1MC5 LINE L1 -797 7164 6732 280 212 129 0 chr2 218837578 218837663 -34418920 - L1MC5 LINE L1 -2341 5467 5372 2173 122 3 9 chr2 218837986 218838315 -34418268 + LTR27 LTR ERV1 5 331 -305 1003 89 7 0 chr2 218838316 218838451 -34418132 + AluYa5 SINE Alu 165 300 -11 794 192 38 6 chr2 218838451 218838658 -34417925 + MER61D LTR ERV1 323 490 -11 508 249 113 65 chr2 218838676 218838905 -34417678 + MER61D-int LTR ERV1 40 279 -6717 * 3782 205 47 36 chr2 218838875 218839764 -34416819 + MER61D-int LTR ERV1 209 1292 -2689 1853 181 5 63 chr2 218839762 218840159 -34416424 + LTR27-int LTR ERV1 4465 4838 -379 * 4966 135 22 0 chr2 218840137 218840914 -34415669 + LTR27-int LTR ERV1 4313 5106 -840 2128 129 40 3 chr2 218840914 218841240 -34415343 + LTR27-int LTR ERV1 3605 3942 -1275 1584 121 64 11 chr2 218841244 218841508 -34415075 + LTR27-int LTR ERV1 4940 5217 0 2461 174 36 19 chr2 218841509 218842028 -34414555 + LTR27 LTR ERV1 3 490 -11 265 277 193 0 chr2 218843200 218843283 -34413300 + MIR SINE MIR 48 146 -116 1047 179 21 0 chr2 218843409 218843599 -34412984 - L1PA16 LINE L1 -5 6161 5968 201 200 0 0 chr2 218843709 218843744 -34412839 + MIR SINE MIR 112 146 -116 1793 199 22 11 chr2 218844136 218844497 -34412086 - MLT1A1 LTR MaLR 0 365 1 240 292 78 32 chr2 218845827 218845981 -34410602 - MARNA DNA Mariner -164 422 262 261 0 0 0 chr2 218846519 218846548 -34410035 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2110 114 0 0 chr2 218846550 218846831 -34409752 - AluSq SINE Alu -31 282 2 21 57 0 0 chr2 218846942 218846977 -34409606 + AT_rich Low_complexity Low_complexity 1 35 0 579 311 29 19 chr2 218847679 218847885 -34408698 - MER20B DNA MER1_type -571 212 5 409 221 96 10 chr2 218847982 218848086 -34408497 + MER94 DNA DNA 2 114 -20 370 211 128 54 chr2 218848119 218848323 -34408260 - MER46C DNA MER2_type -4 334 116 300 269 102 0 chr2 218848637 218848745 -34407838 - MIR SINE MIR -14 248 130 29 78 0 0 chr2 218850393 218850457 -34406126 + AT_rich Low_complexity Low_complexity 1 64 0 1061 212 206 28 chr2 218850464 218850789 -34405794 + MSTD LTR MaLR 1 383 -13 380 320 164 11 chr2 218852046 218852399 -34404184 - MLT1H LTR MaLR -118 431 25 325 356 62 7 chr2 218852585 218852731 -34403852 + MIR SINE MIR 70 223 -39 360 0 0 0 chr2 218852895 218852935 -34403648 + (TA)n Simple_repeat Simple_repeat 2 41 0 5126 148 57 43 chr2 218853409 218854465 -34402118 + MER11C LTR ERVK 1 1071 0 30 45 0 0 chr2 218854845 218854889 -34401694 + AT_rich Low_complexity Low_complexity 1 44 0 21 82 0 0 chr2 218855144 218855193 -34401390 + AT_rich Low_complexity Low_complexity 1 49 0 2158 123 13 0 chr2 218855227 218855535 -34401048 + AluSx SINE Alu 1 312 0 1383 102 93 0 chr2 218855779 218856015 -34400568 + L1MA1 LINE L1 6045 6302 0 14694 122 11 6 chr2 218856394 218857687 -34398896 + L1P LINE L1 1026 2335 -3811 207 0 0 0 chr2 218857687 218857710 -34398873 + (CAA)n Simple_repeat Simple_repeat 2 24 0 14694 122 11 6 chr2 218857710 218858755 -34397828 + L1P LINE L1 2335 3374 -2772 1475 153 122 3 chr2 218858878 218859172 -34397411 - MER51B LTR ERV1 0 377 49 522 139 141 14 chr2 218859172 218859280 -34397303 - MER51A LTR ERV1 -257 120 1 1745 73 27 4 chr2 218859400 218859660 -34396923 + L1MA5 LINE L1 6032 6297 -3 1887 150 0 0 chr2 218859737 218860010 -34396573 - AluSx SINE Alu -37 275 3 721 253 75 23 chr2 218860024 218860332 -34396251 + L1MC5 LINE L1 7336 7659 -302 8757 116 4 15 chr2 218860335 218861633 -34394950 - HSMAR1 DNA Mariner 0 1287 4 224 241 0 0 chr2 218861665 218861719 -34394864 + (TA)n Simple_repeat Simple_repeat 1 54 0 191 298 53 86 chr2 218862357 218862508 -34394075 - L2 LINE L2 0 3272 3127 204 40 0 0 chr2 218863038 218863063 -34393520 + (TG)n Simple_repeat Simple_repeat 2 26 0 23 0 0 0 chr2 218863438 218863461 -34393122 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 218865525 218865548 -34391035 + AT_rich Low_complexity Low_complexity 1 23 0 790 175 8 0 chr2 218865640 218865760 -34390823 - 5S rRNA rRNA 0 121 1 22 0 0 0 chr2 218866334 218866356 -34390227 + AT_rich Low_complexity Low_complexity 1 22 0 11466 203 75 38 chr2 218866356 218871213 -34385370 - L1PA16 LINE L1 -7 6862 1949 1600 240 14 6 chr2 218871216 218871566 -34385017 + MLT1A1 LTR MaLR 13 365 0 775 172 8 0 chr2 218871566 218871700 -34384883 + L1MB1 LINE L1 5794 5928 -240 756 208 140 44 chr2 218871698 218871948 -34384635 + L1ME LINE L1 5478 5751 -415 * 1979 134 14 0 chr2 218872238 218872530 -34384053 - AluSx SINE Alu -16 296 1 28 29 0 0 chr2 218873122 218873157 -34383426 + AT_rich Low_complexity Low_complexity 1 35 0 180 344 123 16 chr2 218873311 218873433 -34383150 - L3 LINE CR1 -148 1429 1295 1146 219 97 10 chr2 218873658 218873946 -34382637 + MLT1E1 LTR MaLR 21 333 -321 753 160 8 0 chr2 218873965 218874084 -34382499 + FLAM_A SINE Alu 1 120 -13 1106 284 27 0 chr2 218874182 218874478 -34382105 + MLT1E LTR MaLR 266 569 -24 365 295 19 9 chr2 218874512 218874617 -34381966 + HERV16 LTR ERVL 2955 3060 -1936 1350 318 60 29 chr2 218874633 218875363 -34381220 + HERV16 LTR ERVL 3606 4358 -1406 26 0 0 0 chr2 218876239 218876265 -34380318 + AT_rich Low_complexity Low_complexity 1 26 0 210 139 0 28 chr2 218877259 218877295 -34379288 + (CA)n Simple_repeat Simple_repeat 2 36 0 1270 143 0 0 chr2 218877438 218877627 -34378956 - THE1C LTR MaLR -186 189 1 1974 78 7 4 chr2 218877627 218877896 -34378687 - THE1C-int LTR MaLR 0 1580 1311 2288 132 127 168 chr2 218877897 218878021 -34378562 + L1MC3 LINE L1 6726 6854 -931 504 117 0 0 chr2 218878021 218878098 -34378485 + (CA)n Simple_repeat Simple_repeat 2 78 0 2288 132 127 168 chr2 218878098 218878347 -34378236 + L1MC3 LINE L1 6854 7112 -673 180 77 0 0 chr2 218878347 218878373 -34378210 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 2288 132 127 168 chr2 218878373 218878423 -34378160 + L1MC3 LINE L1 7112 7163 -622 250 344 11 0 chr2 218878423 218878513 -34378070 + MLT1F1 LTR MaLR 35 125 -442 2288 132 127 168 chr2 218878513 218878921 -34377662 + L1MC3 LINE L1 7163 7610 -175 260 244 44 33 chr2 218879357 218879447 -34377136 + MER103 DNA DNA 56 146 -20 22 0 0 0 chr2 218880039 218880061 -34376522 + AT_rich Low_complexity Low_complexity 1 22 0 759 280 78 45 chr2 218880909 218881306 -34375277 + MLT1J LTR MaLR 71 480 -31 902 28 0 0 chr2 218882721 218882827 -34373756 - L1PA4 LINE L1 -8 6147 6042 318 50 0 0 chr2 218883963 218884003 -34372580 + (CA)n Simple_repeat Simple_repeat 1 40 0 308 275 12 0 chr2 218884717 218884797 -34371786 + MIR SINE MIR 65 145 -117 2068 62 0 14 chr2 218886419 218886708 -34369875 + HERVH LTR ERV1 7429 7713 0 3387 64 2 7 chr2 218886708 218887158 -34369425 + LTR7 LTR ERV1 1 448 -2 8263 93 20 28 chr2 218887160 218888445 -34368138 + HERVH LTR ERV1 1 1275 -6438 1610 205 44 36 chr2 218889546 218890252 -34366331 - L1MC/D LINE L1 -743 5472 5044 * 1743 171 59 13 chr2 218890244 218890851 -34365732 - L1M2 LINE L1 -658 5654 5024 2425 249 38 17 chr2 218891581 218892220 -34364363 - MER82 DNA MER2_type -1 652 1 189 0 0 0 chr2 218893215 218893236 -34363347 + (A)n Simple_repeat Simple_repeat 1 21 0 673 225 103 61 chr2 218893499 218893870 -34362713 - MLT1C LTR MaLR -4 463 51 1186 242 60 10 chr2 218893905 218894323 -34362260 - L1MC/D LINE L1 -1281 4934 4496 306 340 81 21 chr2 218894380 218894615 -34361968 - L1MC/D LINE L1 -5753 643 395 442 294 98 14 chr2 218894660 218894936 -34361647 - L1MC/D LINE L1 -6074 322 24 2197 116 3 0 chr2 218894939 218895242 -34361341 - AluSp SINE Alu -9 304 1 216 244 209 23 chr2 218896846 218896932 -34359651 + MER5A DNA MER1_type 87 188 -1 21 36 0 0 chr2 218898400 218898428 -34358155 + AT_rich Low_complexity Low_complexity 1 28 0 1601 246 27 40 chr2 218898491 218899181 -34357402 - L1ME1 LINE L1 0 6184 5509 243 326 22 0 chr2 218899198 218899290 -34357293 + GA-rich Low_complexity Low_complexity 2 95 0 244 327 178 9 chr2 218899401 218899508 -34357075 + MIR SINE MIR 17 141 -67 248 320 96 16 chr2 218899633 218899758 -34356825 - L2 LINE L2 -345 2968 2834 962 178 107 0 chr2 218899806 218900003 -34356580 + MIR SINE MIR 21 238 -24 278 241 214 35 chr2 218900894 218901039 -34355544 - MIR SINE MIR 0 262 92 41 21 0 0 chr2 218901120 218901168 -34355415 + AT_rich Low_complexity Low_complexity 1 48 0 699 280 106 7 chr2 218901632 218901914 -34354669 + L1PB3 LINE L1 3 312 -6551 5479 175 31 7 chr2 218901930 218903080 -34353503 + L1PB3 LINE L1 749 1926 -4937 * 12009 184 26 26 chr2 218903068 218906829 -34349754 + L1PB3 LINE L1 3102 6863 -7 262 281 100 18 chr2 218907777 218907974 -34348609 - L1MEc LINE L1 -920 1656 1425 198 304 18 0 chr2 218908838 218908894 -34347689 - L2 LINE L2 -321 2951 2895 2129 8 0 0 chr2 218909165 218909407 -34347176 - L1PA2 LINE L1 -189 5966 5725 585 13 0 0 chr2 218909407 218909482 -34347101 + L1PA2 LINE L1 6081 6155 0 355 254 56 48 chr2 218911048 218911083 -34345500 + L2 LINE L2 2386 2419 -895 3188 148 51 24 chr2 218911083 218911478 -34345105 - LTR26 LTR ERV1 0 603 185 2170 97 7 3 chr2 218911478 218911776 -34344807 - AluSg SINE Alu -11 299 1 3188 148 51 24 chr2 218911776 218911967 -34344616 - LTR26 LTR ERV1 -418 185 1 355 254 56 48 chr2 218911967 218912057 -34344526 + L2 LINE L2 2419 2512 -802 523 303 197 6 chr2 218912125 218912475 -34344108 - L1MC4a LINE L1 -1639 6169 5753 2174 114 0 7 chr2 218913251 218913549 -34343034 + AluSx SINE Alu 1 296 -16 40 0 0 0 chr2 218914879 218914919 -34341664 + AT_rich Low_complexity Low_complexity 1 40 0 2056 97 3 49 chr2 218915696 218916004 -34340579 - AluSx SINE Alu -18 294 1 277 196 78 111 chr2 218916019 218916172 -34340411 - L1MD3 LINE L1 -15 7980 7833 3049 231 52 30 chr2 218916176 218916436 -34340147 - L1MD2 LINE L1 -218 6535 6282 1974 177 15 47 chr2 218916436 218916837 -34339746 + MLT1B LTR MaLR 3 390 0 3049 231 52 30 chr2 218916837 218917574 -34339009 - L1MD2 LINE L1 -471 6282 5506 2663 255 131 43 chr2 218917557 218918202 -34338381 - L1MD2 LINE L1 -5443 1097 510 * 2669 149 2 36 chr2 218918202 218918469 -34338114 + L1MA4A LINE L1 5818 6062 -241 1809 143 3 55 chr2 218918469 218918797 -34337786 + AluJb SINE Alu 1 311 -1 2669 149 2 36 chr2 218918797 218919025 -34337558 + L1MA4A LINE L1 6062 6296 -7 2663 255 131 43 chr2 218919025 218919316 -34337267 - L1MD2 LINE L1 -6030 510 67 572 212 8 0 chr2 218919316 218919448 -34337135 + L1PB4 LINE L1 6021 6153 -3 2663 255 131 43 chr2 218919448 218919499 -34337084 - L1MD2 LINE L1 -6473 67 22 23 0 0 0 chr2 218919677 218919700 -34336883 + AT_rich Low_complexity Low_complexity 1 23 0 202 367 78 6 chr2 218920174 218920354 -34336229 + MIR SINE MIR 15 207 -55 28 95 0 0 chr2 218920565 218920649 -34335934 + AT_rich Low_complexity Low_complexity 1 84 0 196 344 172 26 chr2 218920649 218920800 -34335783 - MIR SINE MIR -15 247 75 236 167 0 19 chr2 218920803 218920857 -34335726 + GA-rich Low_complexity Low_complexity 2 54 0 408 284 150 0 chr2 218920860 218920987 -34335596 - L2 LINE L2 -18 3295 3150 259 313 62 0 chr2 218922307 218922451 -34334132 - L1ME4a LINE L1 -42 6079 5927 256 338 0 0 chr2 218924661 218924735 -34331848 - MER119 DNA MER1_type -7 576 503 * 399 241 25 0 chr2 218924731 218924810 -34331773 - MER119 DNA MER1_type -500 83 3 266 285 285 30 chr2 218924884 218925084 -34331499 + MER69B DNA AcHobo 20 270 -956 999 239 160 18 chr2 218925089 218925543 -34331040 + MER69B DNA AcHobo 506 1078 -1448 1232 167 211 0 chr2 218925543 218925789 -34330794 - AluJb SINE Alu -4 298 1 999 239 160 18 chr2 218925789 218925962 -34330621 + MER69B DNA AcHobo 1078 1225 -1 1906 145 11 26 chr2 218926246 218926598 -34329985 + L1MA7 LINE L1 5683 6029 -262 428 95 0 0 chr2 218926614 218926677 -34329906 - L1PA5 LINE L1 -5 6149 6087 2043 81 4 1 chr2 218926677 218926973 -34329610 + L1MC/D LINE L1 5496 5796 -418 410 280 166 6 chr2 218927344 218927501 -34329082 - MIR SINE MIR -71 191 10 202 93 23 23 chr2 218927921 218927964 -34328619 + (CA)n Simple_repeat Simple_repeat 2 44 0 29 28 0 0 chr2 218928093 218928129 -34328454 + AT_rich Low_complexity Low_complexity 1 36 0 3387 64 2 7 chr2 218928139 218928589 -34327994 + LTR7 LTR ERV1 1 448 -2 19138 105 14 40 chr2 218928591 218931664 -34324919 + HERVH LTR ERV1 1 2995 -4718 879 136 27 0 chr2 218931643 218931790 -34324793 + HERVH LTR ERV1 3140 3290 -4423 * 8628 100 3 7 chr2 218931780 218933506 -34323077 + HERVH LTR ERV1 3492 5273 -1818 1388 125 19 0 chr2 218933507 218933723 -34322860 + HERVH LTR ERV1 5600 5819 -1894 * 2577 79 39 11 chr2 218933721 218934102 -34322481 + HERVH LTR ERV1 7322 7713 0 3436 56 7 7 chr2 218934102 218934550 -34322033 + LTR7 LTR ERV1 1 448 -2 1347 195 7 33 chr2 218935142 218935444 -34321139 - L1MB3 LINE L1 -32 6151 5858 593 204 28 11 chr2 218935799 218935975 -34320608 + LTR7 LTR ERV1 272 450 0 1347 195 7 33 chr2 218936565 218936867 -34319716 - L1MB3 LINE L1 -32 6151 5858 26 74 0 0 chr2 218937480 218937534 -34319049 + AT_rich Low_complexity Low_complexity 1 54 0 269 348 27 0 chr2 218938710 218938822 -34317761 - MLT2E LTR ERVL -478 150 36 25 0 0 0 chr2 218939021 218939046 -34317537 + AT_rich Low_complexity Low_complexity 1 25 0 1600 91 0 56 chr2 218939592 218939824 -34316759 - AluSg/x SINE Alu -8 304 86 481 372 18 0 chr2 218940002 218940220 -34316363 + MIR SINE MIR 1 222 -40 442 335 0 0 chr2 218940523 218940705 -34315878 + L1MC4a LINE L1 5761 5942 -1866 315 0 0 0 chr2 218940706 218940741 -34315842 + (TG)n Simple_repeat Simple_repeat 2 36 0 250 319 25 0 chr2 218940829 218940948 -34315635 + (TA)n Simple_repeat Simple_repeat 1 122 0 184 175 100 0 chr2 218941289 218941329 -34315254 + L2 LINE L2 3266 3309 -4 1662 84 4 0 chr2 218943198 218943424 -34313159 - L1PB1 LINE L1 -2 6149 5923 1234 114 57 24 chr2 218943430 218943503 -34313080 + L1PB1 LINE L1 5709 5778 -373 270 81 0 0 chr2 218943503 218943540 -34313043 + (TA)n Simple_repeat Simple_repeat 2 38 0 1234 114 57 24 chr2 218943540 218943677 -34312906 + L1PB1 LINE L1 5778 5926 -225 * 8194 135 48 12 chr2 218943674 218944146 -34312437 - L1PBa LINE L1 -3226 3636 3182 482 91 26 13 chr2 218944146 218944223 -34312360 + MADE1 DNA Mariner 3 80 0 8194 135 48 12 chr2 218944223 218946054 -34310529 - L1PBa LINE L1 -3680 3182 620 941 203 10 5 chr2 218946035 218946232 -34310351 - L1PBa LINE L1 -6663 200 3 * 209 116 0 23 chr2 218947345 218947388 -34309195 + (TTTTG)n Simple_repeat Simple_repeat 4 45 0 4003 122 31 12 chr2 218947589 218948235 -34308348 - L1PA13 LINE L1 -4 6159 5502 1972 207 16 5 chr2 218948238 218948678 -34307905 + LTR1B LTR ERV1 1 445 -381 336 364 0 0 chr2 218948702 218948878 -34307705 + C-rich Low_complexity Low_complexity 1 176 0 871 173 44 44 chr2 218949096 218949321 -34307262 - L1PBa LINE L1 -6002 861 637 682 210 65 0 chr2 218949323 218949509 -34307074 - L1PBa LINE L1 -6663 200 3 209 116 0 23 chr2 218950622 218950665 -34305918 + (TTTTG)n Simple_repeat Simple_repeat 4 45 0 4149 120 30 18 chr2 218950866 218951514 -34305069 - L1PA13 LINE L1 -4 6159 5501 4480 161 35 9 chr2 218951514 218952244 -34304339 + LTR1B LTR ERV1 1 755 -71 180 0 0 0 chr2 218952244 218952264 -34304319 + (CAG)n Simple_repeat Simple_repeat 2 21 0 4480 161 35 9 chr2 218952264 218952338 -34304245 + LTR1B LTR ERV1 755 826 0 4149 120 30 18 chr2 218952338 218952366 -34304217 - L1PA13 LINE L1 -662 5501 5475 1752 172 18 0 chr2 218952366 218952698 -34303885 - L1P LINE L1 -2163 3983 3646 1590 242 51 93 chr2 218953342 218954083 -34302500 + L1MCb LINE L1 29 738 -5307 2151 165 42 31 chr2 218954096 218954635 -34301948 - MLT2A2 LTR ERVL -1 553 1 10387 205 34 39 chr2 218954635 218954993 -34301590 + L1MC3 LINE L1 5075 5433 -2352 1683 174 10 16 chr2 218954993 218955303 -34301280 + AluJb SINE Alu 1 308 -4 10387 205 34 39 chr2 218955303 218956786 -34299797 + L1MC3 LINE L1 5433 6921 -864 225 65 0 0 chr2 218956786 218956817 -34299766 + (CA)n Simple_repeat Simple_repeat 2 32 0 10387 205 34 39 chr2 218956817 218956972 -34299611 + L1MC3 LINE L1 6921 7075 -710 216 67 0 0 chr2 218956972 218957002 -34299581 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 10387 205 34 39 chr2 218957002 218957711 -34298872 + L1MC3 LINE L1 7075 7770 -15 250 289 0 29 chr2 218958349 218958453 -34298130 + GA-rich Low_complexity Low_complexity 4 104 0 6125 138 17 4 chr2 218958669 218960194 -34296389 + L1PB1 LINE L1 4568 6108 -43 30 83 0 0 chr2 218960194 218960266 -34296317 + AT_rich Low_complexity Low_complexity 1 72 0 11815 166 83 13 chr2 218960266 218964617 -34291966 + L1MA3 LINE L1 3041 7724 0 1343 122 47 16 chr2 218964624 218964878 -34291705 + L1MA4 LINE L1 6039 6300 0 2061 106 53 0 chr2 218965079 218965401 -34291182 + L1MA2 LINE L1 5962 6300 -4 306 73 0 0 chr2 218965717 218965758 -34290825 + (TG)n Simple_repeat Simple_repeat 2 42 0 388 353 43 25 chr2 218967892 218968170 -34288413 - L2 LINE L2 -431 2883 2601 492 283 36 16 chr2 218972360 218972532 -34284051 - MIR SINE MIR -62 146 8 335 262 74 16 chr2 218973759 218973881 -34282702 - L1ME4a LINE L1 -2 6119 5991 2116 113 0 0 chr2 218973957 218974266 -34282317 - AluSx SINE Alu 0 309 1 375 223 43 21 chr2 218974975 218975069 -34281514 - MER5B DNA MER1_type 0 178 83 651 210 39 0 chr2 218975344 218975513 -34281070 + MSTC LTR MaLR 1 175 -221 1718 157 26 7 chr2 218975676 218975982 -34280601 - MLT2A1 LTR ERVL -125 319 8 562 342 79 32 chr2 218976663 218977069 -34279514 - LTR16B LTR ERVL -39 425 1 367 314 68 0 chr2 218977396 218977514 -34279069 + MIR3 SINE MIR 58 183 -25 5170 158 29 14 chr2 218979977 218981686 -34274897 - L1MA8 LINE L1 -70 6221 4490 381 205 96 0 chr2 218981735 218981818 -34274765 - MER58A DNA MER1_type 0 139 49 34152 41 32 1 chr2 218982629 218986916 -34269667 + L1P LINE L1 1 4418 -1728 36620 33 1 0 chr2 218987016 218992274 -34264309 + L1PA2 LINE L1 918 6179 0 180 0 0 0 chr2 218992291 218992311 -34264272 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 659 274 10 10 chr2 218993025 218993222 -34263361 + MIR SINE MIR 66 262 0 9794 42 6 0 chr2 218993912 218995893 -34260690 - L1PA5 LINE L1 -2 6152 4165 240 268 0 0 chr2 218996166 218996222 -34260361 + L1MC/D LINE L1 5686 5741 -2067 22 0 0 0 chr2 218996494 218996516 -34260067 + AT_rich Low_complexity Low_complexity 1 22 0 252 354 273 6 chr2 218997215 218997376 -34259207 + MIR3 SINE MIR 3 206 -2 198 351 89 26 chr2 218997418 218997609 -34258974 + L3b LINE CR1 1370 1572 -11 209 225 213 12 chr2 218997943 218998023 -34258560 + MIR SINE MIR 116 211 -51 25 0 0 0 chr2 218998459 218998484 -34258099 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr2 218999463 218999491 -34257092 + AT_rich Low_complexity Low_complexity 1 28 0 362 226 9 66 chr2 219000062 219000168 -34256415 + L1MEc LINE L1 503 602 -5794 237 224 24 88 chr2 219000196 219000321 -34256262 + L1MEc LINE L1 691 807 -5589 * 4802 176 23 44 chr2 219000318 219001372 -34255211 + L1MA10 LINE L1 5303 6334 0 332 151 81 35 chr2 219002617 219002703 -34253880 - L1MC4 LINE L1 -1338 6704 6615 180 77 0 0 chr2 219003022 219003048 -34253535 + (CCTTG)n Simple_repeat Simple_repeat 5 30 0 208 338 12 12 chr2 219003647 219003727 -34252856 + MIR SINE MIR 113 192 -70 182 196 0 87 chr2 219004002 219004048 -34252535 - MER5A DNA MER1_type -97 92 51 392 232 80 18 chr2 219004857 219004969 -34251614 - MER91C DNA MER1_type -21 119 1 675 200 81 6 chr2 219005558 219005718 -34250865 + MIR SINE MIR 17 188 -74 1147 176 51 34 chr2 219006752 219006970 -34249613 + MER33 DNA MER1_type 25 251 -2334 2253 98 0 3 chr2 219006970 219007265 -34249318 - AluSq SINE Alu -19 294 1 1147 176 51 34 chr2 219007265 219007341 -34249242 + MER33 DNA MER1_type 251 324 0 235 333 87 32 chr2 219007709 219007835 -34248748 + L2 LINE L2 3137 3269 -3 207 0 0 0 chr2 219009909 219009932 -34246651 + (TA)n Simple_repeat Simple_repeat 2 24 0 213 121 0 0 chr2 219012012 219012045 -34244538 + (GGAA)n Simple_repeat Simple_repeat 3 35 0 366 245 13 0 chr2 219013070 219013160 -34243423 + MLT1A1 LTR MaLR 225 315 -59 4708 169 56 20 chr2 219013197 219014519 -34242064 - L1MA8 LINE L1 -22 6269 4897 186 43 0 0 chr2 219015042 219015065 -34241518 + (CAATT)n Simple_repeat Simple_repeat 2 24 0 1993 246 27 20 chr2 219015443 219015995 -34240588 + L1ME1 LINE L1 5582 6137 -29 24 0 0 0 chr2 219016001 219016025 -34240558 + AT_rich Low_complexity Low_complexity 1 24 0 2144 126 0 0 chr2 219016046 219016348 -34240235 + AluSx SINE Alu 1 302 -10 318 286 80 43 chr2 219016394 219016695 -34239888 + L1ME LINE L1 5259 5570 -594 228 181 69 69 chr2 219016828 219016900 -34239683 + MER112 DNA MER1_type 1 72 -188 530 258 97 32 chr2 219017022 219017208 -34239375 + MLT1L LTR MaLR 327 524 -91 2168 66 0 11 chr2 219017237 219017524 -34239059 + L1PA7 LINE L1 5867 6150 -4 25 51 0 0 chr2 219017868 219017907 -34238676 + AT_rich Low_complexity Low_complexity 1 39 0 1259 174 66 7 chr2 219019203 219019491 -34237092 - L1MB1 LINE L1 0 6168 5864 1613 260 27 11 chr2 219019495 219020018 -34236565 - L1M4 LINE L1 -3452 2694 2164 184 337 3 131 chr2 219020563 219020845 -34235738 + L2 LINE L2 3009 3254 -18 222 295 192 13 chr2 219020858 219021014 -34235569 - MIR SINE MIR -18 244 61 988 197 12 79 chr2 219021403 219021657 -34234926 - MSTB1 LTR MaLR -195 237 1 668 183 20 1 chr2 219021657 219021808 -34234775 - L1MB1 LINE L1 -995 5151 4996 1605 146 20 30 chr2 219021809 219022111 -34234472 + L1MB1 LINE L1 5887 6185 -4 226 306 57 31 chr2 219022088 219022281 -34234302 + HAL1b LINE L1 345 542 -806 * 189 245 0 0 chr2 219023611 219023660 -34232923 + GA-rich Low_complexity Low_complexity 2 50 0 434 309 0 29 chr2 219023771 219023910 -34232673 + L2 LINE L2 2954 3088 -225 25 31 0 0 chr2 219024519 219024551 -34232032 + AT_rich Low_complexity Low_complexity 1 32 0 3907 68 4 11 chr2 219025660 219026186 -34230397 + L1PA10 LINE L1 5601 6122 -46 9325 230 43 10 chr2 219026189 219026701 -34229882 + L1MB3 LINE L1 2400 2893 -3290 1479 179 136 17 chr2 219026701 219027053 -34229530 + MSTD LTR MaLR 3 396 0 9325 230 43 10 chr2 219027053 219030192 -34226391 + L1MB3 LINE L1 2893 6176 -7 674 295 25 4 chr2 219030276 219030514 -34226069 + MIR SINE MIR 15 235 -27 494 252 8 0 chr2 219030516 219030635 -34225948 + MIR SINE MIR 137 256 -6 372 325 75 21 chr2 219030718 219030958 -34225625 + L2 LINE L2 2725 2977 -337 393 278 35 17 chr2 219031307 219031422 -34225161 + L2 LINE L2 3181 3297 -16 276 340 64 11 chr2 219031428 219031522 -34225061 - L2 LINE L2 -38 3234 3136 33 0 0 0 chr2 219031700 219031733 -34224850 + AT_rich Low_complexity Low_complexity 1 33 0 26 74 0 0 chr2 219031976 219032030 -34224553 + AT_rich Low_complexity Low_complexity 1 54 0 2304 192 116 17 chr2 219035070 219035654 -34220929 + L1MB8 LINE L1 5276 5917 -261 3715 70 36 55 chr2 219035654 219036225 -34220358 + MER41A LTR ERV1 1 557 0 326 203 25 13 chr2 219036225 219036304 -34220279 + L1MB8 LINE L1 5926 6005 -173 26 0 0 0 chr2 219036384 219036410 -34220173 + AT_rich Low_complexity Low_complexity 1 26 0 4749 87 26 2 chr2 219036912 219037556 -34219027 + PABL_A LTR ERV1 1 660 0 332 364 85 8 chr2 219039288 219039417 -34217166 - MIR SINE MIR -108 154 16 22 0 0 0 chr2 219039496 219039518 -34217065 + AT_rich Low_complexity Low_complexity 1 22 0 233 352 117 0 chr2 219039592 219039720 -34216863 + MIR3 SINE MIR 31 173 -35 1185 152 53 83 chr2 219040099 219040401 -34216182 + L1MA7 LINE L1 5997 6289 -2 289 137 55 82 chr2 219040422 219040495 -34216088 - L1M2 LINE L1 -4509 2659 2589 358 310 59 67 chr2 219041030 219041401 -34215182 - L1M2 LINE L1 -6797 371 4 204 340 44 68 chr2 219041403 219041724 -34214859 + L2 LINE L2 2911 3223 -90 198 0 0 0 chr2 219041724 219041746 -34214837 + (TTA)n Simple_repeat Simple_repeat 3 24 0 373 23 0 0 chr2 219041746 219041790 -34214793 - L1PA4 LINE L1 -18 6137 6094 23 0 0 0 chr2 219042331 219042354 -34214229 + AT_rich Low_complexity Low_complexity 1 23 0 230 118 39 0 chr2 219042432 219042483 -34214100 + T-rich Low_complexity Low_complexity 4 56 0 3620 68 10 2 chr2 219042491 219042980 -34213603 - L1PA13 LINE L1 0 6163 5671 259 214 143 10 chr2 219043180 219043278 -34213305 - L1ME4a LINE L1 -34 6087 5977 1596 70 5 0 chr2 219043303 219043518 -34213065 + L1PA3 LINE L1 1 216 -5930 37538 30 24 3 chr2 219043518 219048935 -34207648 + L1PA3 LINE L1 624 6155 0 33 73 0 0 chr2 219048951 219049019 -34207564 + AT_rich Low_complexity Low_complexity 1 68 0 374 262 118 31 chr2 219049034 219049150 -34207433 - HAL1b LINE L1 -567 781 677 1845 203 98 28 chr2 219049150 219049622 -34206961 + MLT1D LTR MaLR 1 505 0 374 262 118 31 chr2 219049622 219049734 -34206849 - HAL1b LINE L1 -671 677 533 418 276 112 27 chr2 219049762 219050092 -34206491 - HAL1b LINE L1 -869 479 122 14189 138 33 7 chr2 219050532 219052889 -34203694 + Tigger1 DNA MER2_type 1 2418 0 2327 80 3 16 chr2 219052909 219053222 -34203361 - AluSp SINE Alu -1 312 4 2325 94 0 3 chr2 219053766 219054073 -34202510 - AluY SINE Alu -5 306 1 574 190 20 0 chr2 219054091 219054191 -34202392 + MER44D DNA MER2_type 1 372 -237 1044 158 0 29 chr2 219054191 219054362 -34202221 + AluSg/x SINE Alu 133 298 -14 1171 128 44 5 chr2 219054428 219054631 -34201952 + MER44D DNA MER2_type 394 604 -5 328 373 0 0 chr2 219054787 219054897 -34201686 - L2 LINE L2 0 3313 3204 460 151 14 0 chr2 219054920 219054993 -34201590 - MER96 DNA MER1_type? -90 85 12 1848 303 148 14 chr2 219055006 219056117 -34200466 - L2 LINE L2 -104 3209 1961 22 70 0 0 chr2 219056916 219056959 -34199624 + AT_rich Low_complexity Low_complexity 1 43 0 5736 119 22 6 chr2 219057079 219058147 -34198436 - L1PA16 LINE L1 -1 6165 5086 570 190 60 0 chr2 219058466 219058582 -34198001 + MLT1A1 LTR MaLR 1 123 -242 7374 88 15 23 chr2 219060048 219061128 -34195455 - MER11C LTR ERVK 0 1071 1 1191 139 106 0 chr2 219061392 219061600 -34194983 + MER30 DNA MER1_type 1 230 0 1123 249 61 33 chr2 219061790 219062152 -34194431 + MLT1A2 LTR MaLR 1 372 -2 27 29 0 0 chr2 219062373 219062407 -34194176 + AT_rich Low_complexity Low_complexity 1 34 0 478 369 44 4 chr2 219062807 219063059 -34193524 - MIR SINE MIR 0 262 1 6630 74 20 0 chr2 219064143 219065075 -34191508 + L1PA8 LINE L1 5215 6165 -7 513 0 0 0 chr2 219066551 219066608 -34189975 + (TG)n Simple_repeat Simple_repeat 1 57 0 3131 192 115 11 chr2 219067351 219067415 -34189168 + Charlie5 DNA MER1_type 1206 1262 -1362 2333 159 88 5 chr2 219067415 219067856 -34188727 + MER66A LTR ERV1 1 478 0 3131 192 115 11 chr2 219067856 219068623 -34187960 + Charlie5 DNA MER1_type 1262 2124 -500 763 163 220 0 chr2 219068631 219068858 -34187725 + Charlie5 DNA MER1_type 2343 2619 0 1103 157 161 71 chr2 219069403 219069553 -34187030 - AluJo SINE Alu -11 291 156 2531 81 0 0 chr2 219069553 219069863 -34186720 - AluY SINE Alu -1 310 1 1103 157 161 71 chr2 219069863 219069979 -34186604 - AluJo SINE Alu -146 156 1 2059 157 38 55 chr2 219070950 219071401 -34185182 - L1MA7 LINE L1 0 6291 5849 1108 92 135 11 chr2 219071401 219071586 -34184997 + L1M2 LINE L1 5500 5707 -584 306 368 73 8 chr2 219071840 219072012 -34184571 + MIR3 SINE MIR 1 185 -23 207 0 0 0 chr2 219072187 219072210 -34184373 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 28 61 0 0 chr2 219072477 219072526 -34184057 + AT_rich Low_complexity Low_complexity 1 49 0 12232 185 77 13 chr2 219073056 219077909 -34178674 + L1PB1 LINE L1 1654 6867 0 842 233 92 52 chr2 219077999 219078496 -34178087 + MLT1D LTR MaLR 29 470 -35 850 289 50 39 chr2 219078693 219079178 -34177405 - L1ME LINE L1 -305 5816 5327 1890 122 16 35 chr2 219080568 219080879 -34175704 - AluSg SINE Alu -5 305 1 208 327 9 37 chr2 219081119 219081226 -34175357 - MIR SINE MIR -55 207 104 1885 145 35 30 chr2 219081547 219081920 -34174663 + THE1C LTR MaLR 1 375 0 301 217 123 9 chr2 219082306 219082412 -34174171 - L1ME3A LINE L1 -4 6166 6049 183 186 0 0 chr2 219082417 219082460 -34174123 + CT-rich Low_complexity Low_complexity 2 44 0 384 279 14 50 chr2 219082588 219082728 -34173855 + MIR SINE MIR 117 251 -11 183 326 23 23 chr2 219082768 219082854 -34173729 + L2 LINE L2 2607 2692 -622 1624 193 20 0 chr2 219083483 219083784 -34172799 + AluJo SINE Alu 1 307 -5 240 143 0 24 chr2 219083950 219083992 -34172591 - MIR SINE MIR -61 201 161 18114 132 16 18 chr2 219085176 219085990 -34170593 - L1PA10 LINE L1 -6 6162 5348 2164 118 3 0 chr2 219085990 219086277 -34170306 - AluSx SINE Alu -24 288 1 18114 132 16 18 chr2 219086277 219089341 -34167242 - L1PA10 LINE L1 -820 5348 2283 7454 36 0 0 chr2 219089665 219090868 -34165715 + L1PA4 LINE L1 4947 6149 -6 41 0 0 0 chr2 219092514 219092555 -34164028 + AT_rich Low_complexity Low_complexity 1 41 0 10511 92 5 1 chr2 219093314 219094786 -34161797 + L1P LINE L1 3402 4879 -1267 1459 179 13 17 chr2 219094889 219095190 -34161393 + L1PA16 LINE L1 5862 6161 -5 23 0 0 0 chr2 219095590 219095613 -34160970 + AT_rich Low_complexity Low_complexity 1 23 0 2402 160 41 19 chr2 219095910 219096329 -34160254 - MSTC LTR MaLR 0 428 1 6005 86 21 16 chr2 219096354 219097246 -34159337 + L1PB1 LINE L1 5254 6150 -1 1372 195 151 71 chr2 219097449 219097958 -34158625 + MER39 LTR ERV1 6 689 -18 234 91 0 0 chr2 219098431 219098464 -34158119 + (CA)n Simple_repeat Simple_repeat 2 34 0 1510 146 30 104 chr2 219098818 219099154 -34157429 + AluYb8 SINE Alu 1 311 -7 3373 40 4 67 chr2 219100772 219101250 -34155333 + LTR7 LTR ERV1 1 448 -2 15394 105 33 17 chr2 219101252 219104076 -34152507 + HERVH LTR ERV1 1 2992 -4721 841 152 41 0 chr2 219104062 219104207 -34152376 + HERVH LTR ERV1 3140 3290 -4423 * 3305 112 6 6 chr2 219104197 219104699 -34151884 + HERVH LTR ERV1 3492 3993 -3720 3525 127 11 2 chr2 219104701 219105227 -34151356 + HERVH LTR ERV1 4488 5018 -2695 544 300 101 25 chr2 219105980 219106217 -34150366 + LTR33 LTR ERVL 26 280 -241 291 296 80 0 chr2 219107338 219107426 -34149157 - MLT1G1 LTR MaLR -16 579 485 356 322 134 30 chr2 219107553 219107755 -34148828 - MLT1H LTR MaLR -302 247 25 203 219 94 31 chr2 219108335 219108399 -34148184 - MIR SINE MIR -85 177 110 502 328 61 25 chr2 219109870 219110068 -34146515 - MIR SINE MIR -31 231 27 21 36 0 0 chr2 219110137 219110165 -34146418 + AT_rich Low_complexity Low_complexity 1 28 0 470 380 16 9 chr2 219110193 219110427 -34146156 + L1M3c LINE L1 184 913 -5218 2621 253 26 9 chr2 219110616 219111563 -34145020 + L1M3c LINE L1 900 1840 -4371 * 28875 110 37 23 chr2 219111562 219116778 -34139805 + L1PA7 LINE L1 1150 7268 -324 2399 90 3 14 chr2 219116878 219117224 -34139359 + L1PA7 LINE L1 7251 7592 0 7836 219 98 27 chr2 219117237 219117401 -34139182 + L1MB1 LINE L1 1625 1776 -4628 2942 6 0 0 chr2 219117401 219117718 -34138865 + AluYb8 SINE Alu 1 317 -1 7836 219 98 27 chr2 219117718 219118272 -34138311 + L1MB1 LINE L1 1776 2289 -4115 2577 124 5 36 chr2 219118272 219118659 -34137924 + L1MA3 LINE L1 5871 6244 -61 1856 157 4 0 chr2 219118659 219118940 -34137643 + AluSx SINE Alu 15 296 -16 2577 124 5 36 chr2 219118940 219118996 -34137587 + L1MA3 LINE L1 6244 6300 -5 7836 219 98 27 chr2 219118996 219122414 -34134169 + L1MB1 LINE L1 2289 6260 -144 1689 158 86 23 chr2 219122414 219122762 -34133821 - THE1C LTR MaLR 0 375 6 21 0 0 0 chr2 219122914 219122935 -34133648 + AT_rich Low_complexity Low_complexity 1 21 0 1469 209 114 8 chr2 219124409 219124767 -34131816 + MSTD LTR MaLR 1 396 0 39 60 0 0 chr2 219124772 219124839 -34131744 + AT_rich Low_complexity Low_complexity 1 67 0 2051 169 0 18 chr2 219126146 219126489 -34130094 - MER1B DNA MER1_type 0 337 1 214 237 17 51 chr2 219126750 219126809 -34129774 - L2 LINE L2 -8 3305 3249 2669 158 5 9 chr2 219126984 219127427 -34129156 + MER65A LTR ERV1 5 445 0 1870 78 0 23 chr2 219127890 219128175 -34128408 + L1PA7 LINE L1 5904 6154 0 21 0 0 0 chr2 219128307 219128328 -34128255 + AT_rich Low_complexity Low_complexity 1 21 0 718 294 53 16 chr2 219128515 219128760 -34127823 + MIR SINE MIR 5 258 -4 353 221 0 0 chr2 219129079 219129147 -34127436 + MLT1A2 LTR MaLR 1 68 -306 865 293 35 35 chr2 219129425 219129736 -34126847 + MLT1A2 LTR MaLR 1 311 -63 2313 90 0 3 chr2 219130136 219130435 -34126148 - AluSq SINE Alu -15 298 1 35 63 0 0 chr2 219130521 219130584 -34125999 + AT_rich Low_complexity Low_complexity 1 63 0 2319 63 0 11 chr2 219130681 219130998 -34125585 - AluY SINE Alu 0 314 1 39954 71 9 2 chr2 219131505 219137598 -34118985 + L1PA5 LINE L1 13 6150 -4 851 145 52 35 chr2 219137603 219137775 -34118808 + MER74A LTR ERVL 376 550 -8 2388 35 0 3 chr2 219138021 219138308 -34118275 - L1PA3 LINE L1 -3 6152 5867 5944 140 12 3 chr2 219139787 219141094 -34115489 - L1PB1 LINE L1 -1 6150 4834 24 32 0 0 chr2 219141946 219141977 -34114606 + AT_rich Low_complexity Low_complexity 1 31 0 23 33 0 0 chr2 219142154 219142184 -34114399 + AT_rich Low_complexity Low_complexity 1 30 0 1980 127 0 33 chr2 219142373 219142680 -34113903 - AluSc SINE Alu -12 297 1 564 275 71 46 chr2 219142881 219143121 -34113462 + MER52-int LTR ERV1 1438 1683 -3115 188 146 0 24 chr2 219143162 219143203 -34113380 + L2 LINE L2 1654 1693 -1621 471 286 55 10 chr2 219143622 219143862 -34112721 + MER52-int LTR ERV1 1591 1823 -5268 364 259 199 6 chr2 219144398 219144564 -34112019 + MIR SINE MIR 5 202 -60 2144 66 15 4 chr2 219145010 219145283 -34111300 - AluSc SINE Alu -11 298 23 3469 182 43 34 chr2 219145768 219146473 -34110110 + MER50 LTR ERV1 1 711 -23 1666 201 0 0 chr2 219146562 219146850 -34109733 + AluJb SINE Alu 1 288 -24 925 276 184 28 chr2 219147447 219147830 -34108753 - LTR50 LTR ERVL -2 793 471 2108 103 0 7 chr2 219147830 219148130 -34108453 + L1PB1 LINE L1 5847 6144 -7 925 276 184 28 chr2 219148130 219148432 -34108151 - LTR50 LTR ERVL -324 471 1 1890 261 133 49 chr2 219149180 219149252 -34107331 - L2 LINE L2 -366 2948 2883 3224 156 23 70 chr2 219149252 219149977 -34106606 + LTR8 LTR ERV1 1 691 0 1890 261 133 49 chr2 219149977 219150808 -34105775 - L2 LINE L2 -431 2883 1969 1874 38 8 8 chr2 219150898 219151134 -34105449 - AluY SINE Alu -2 309 74 358 235 0 12 chr2 219151493 219151578 -34105005 + MLT1D LTR MaLR 35 118 -387 4450 251 22 59 chr2 219151795 219153355 -34103228 + L1MC1 LINE L1 3832 5333 -813 * 11661 60 5 1 chr2 219153352 219154857 -34101726 - L1PA5 LINE L1 -3132 3014 1504 18613 46 8 0 chr2 219154858 219157979 -34098604 + L1PA5 LINE L1 3023 6153 -1 5083 169 37 12 chr2 219157984 219158934 -34097649 + L1MC1 LINE L1 5319 6292 -41 1326 243 51 0 chr2 219158966 219159262 -34097321 - MER74B LTR ERVL -243 379 69 803 307 85 10 chr2 219159426 219160013 -34096570 - L1M4 LINE L1 -1830 4316 3686 1971 136 36 21 chr2 219160874 219161205 -34095378 - MER1B DNA MER1_type 0 337 2 1618 157 0 7 chr2 219162311 219162604 -34093979 + L1MA6 LINE L1 6009 6299 -1 1148 152 28 38 chr2 219162917 219163128 -34093455 + AluJb SINE Alu 91 299 -13 2861 133 21 0 chr2 219163134 219163606 -34092977 + L1P4 LINE L1 5302 5783 -383 837 0 11 0 chr2 219163709 219163804 -34092779 + LTR7 LTR ERV1 353 448 -2 24 0 0 0 chr2 219163956 219163980 -34092603 + AT_rich Low_complexity Low_complexity 1 24 0 386 345 58 18 chr2 219164086 219164257 -34092326 - MIR SINE MIR -55 207 30 700 169 155 0 chr2 219164469 219164609 -34091974 - MSTA LTR MaLR 0 428 267 4333 182 70 17 chr2 219164609 219165082 -34091501 - MER52A LTR ERV1 0 1755 1309 5886 46 42 16 chr2 219165082 219165842 -34090741 + LTR17 LTR ERV1 1 780 0 4333 182 70 17 chr2 219165842 219166821 -34089762 - MER52A LTR ERV1 -446 1309 204 969 158 226 5 chr2 219166844 219167065 -34089518 - MSTA LTR MaLR -158 270 1 236 286 113 38 chr2 219167962 219168095 -34088488 - MIR SINE MIR -112 150 8 293 197 66 0 chr2 219168183 219168244 -34088339 - MLT1K LTR MaLR 0 588 524 304 392 53 0 chr2 219168456 219168627 -34087956 - L2 LINE L2 -257 3015 2836 224 119 0 24 chr2 219168637 219168679 -34087904 + (TA)n Simple_repeat Simple_repeat 1 41 0 185 357 121 33 chr2 219168762 219168944 -34087639 - L2 LINE L2 -567 2747 2550 473 306 35 43 chr2 219169226 219169458 -34087125 - L2 LINE L2 -1144 2170 1941 2039 166 51 8 chr2 219169581 219169955 -34086628 + MLT1B LTR MaLR 1 390 0 207 321 28 37 chr2 219169956 219170065 -34086518 - L2 LINE L2 -1415 1899 1792 2229 119 7 0 chr2 219171470 219171780 -34084803 + AluSx SINE Alu 1 312 0 200 288 15 0 chr2 219173701 219173767 -34082816 - L2 LINE L2 -86 3227 3161 24 32 0 0 chr2 219174951 219174982 -34081601 + AT_rich Low_complexity Low_complexity 1 31 0 227 261 92 15 chr2 219176396 219176461 -34080122 + MIR SINE MIR 12 81 -181 378 0 0 0 chr2 219178505 219178547 -34078036 + (TG)n Simple_repeat Simple_repeat 1 42 0 303 85 0 0 chr2 219178547 219178594 -34077989 + (GA)n Simple_repeat Simple_repeat 2 48 0 213 258 0 0 chr2 219179611 219179677 -34076906 + (TA)n Simple_repeat Simple_repeat 1 66 0 1685 255 131 30 chr2 219179704 219180150 -34076433 - MLT1E LTR MaLR 0 593 83 2974 96 42 5 chr2 219180150 219180578 -34076005 - MLT2A1 LTR ERVL 0 444 1 1685 255 131 30 chr2 219180578 219180665 -34075918 - MLT1E LTR MaLR -510 83 6 894 186 79 42 chr2 219180737 219180952 -34075631 + MER58A DNA MER1_type 1 223 -1 243 333 67 0 chr2 219181273 219181363 -34075220 - MIR3 SINE MIR -39 169 74 270 121 110 18 chr2 219181484 219181558 -34075025 - L1MD3 LINE L1 0 7995 7706 555 320 69 46 chr2 219181618 219181659 -34074924 + L3 LINE CR1 1069 1108 -469 2134 154 86 8 chr2 219181659 219182056 -34074527 - MSTA LTR MaLR 0 428 1 555 320 69 46 chr2 219182056 219182405 -34074178 + L3 LINE CR1 1108 1468 -109 901 160 30 157 chr2 219182435 219182773 -34073810 - MER51C LTR ERV1 0 640 346 2071 81 7 0 chr2 219183354 219183649 -34072934 + L1PA13 LINE L1 5867 6163 0 25 0 0 0 chr2 219183752 219183777 -34072806 + AT_rich Low_complexity Low_complexity 1 25 0 212 175 0 25 chr2 219184284 219184324 -34072259 + GA-rich Low_complexity Low_complexity 3 41 0 30 77 0 0 chr2 219184841 219184906 -34071677 + AT_rich Low_complexity Low_complexity 1 65 0 309 51 0 0 chr2 219184978 219185017 -34071566 + (TG)n Simple_repeat Simple_repeat 1 39 0 2236 59 15 59 chr2 219185280 219185604 -34070979 - AluY SINE Alu -1 310 1 2089 113 0 13 chr2 219185856 219186156 -34070427 + AluY SINE Alu 1 296 -15 490 206 74 63 chr2 219187293 219187468 -34069115 + LTR41 LTR ERVL 1 177 -596 706 242 31 68 chr2 219187603 219187807 -34068776 + L1M4 LINE L1 2665 2854 -3292 2411 54 3 3 chr2 219187807 219188104 -34068479 + AluY SINE Alu 1 297 -14 706 242 31 68 chr2 219188104 219188225 -34068358 + L1M4 LINE L1 2854 2978 -3168 231 321 86 36 chr2 219188225 219188365 -34068218 + MIR3 SINE MIR 60 206 -2 21 57 0 0 chr2 219188440 219188475 -34068108 + AT_rich Low_complexity Low_complexity 1 35 0 586 345 24 5 chr2 219190682 219190888 -34065695 + MIR SINE MIR 17 226 -36 7701 22 0 0 chr2 219190978 219191914 -34064669 - L1PA3 LINE L1 -1 6154 5220 5129 20 2 0 chr2 219191914 219192522 -34064061 + L1PA3 LINE L1 4621 5229 -917 563 315 76 5 chr2 219194000 219194197 -34062386 + MIR SINE MIR 24 234 -28 267 183 19 96 chr2 219195355 219195459 -34061124 + MLT1I LTR MaLR 285 552 -15 207 150 25 0 chr2 219196158 219196198 -34060385 + L2 LINE L2 1883 1923 -1391 489 35 58 23 chr2 219196204 219196290 -34060293 + CT-rich Low_complexity Low_complexity 1 180 0 2055 124 6 22 chr2 219196290 219196606 -34059977 - AluSg SINE Alu 0 397 1 1452 300 198 14 chr2 219196616 219197418 -34059165 + L2 LINE L2 1931 2878 -394 1969 110 0 63 chr2 219198256 219198574 -34058009 - AluSx SINE Alu -14 298 1 25 0 0 0 chr2 219199275 219199300 -34057283 + AT_rich Low_complexity Low_complexity 1 25 0 21 57 0 0 chr2 219199331 219199366 -34057217 + AT_rich Low_complexity Low_complexity 1 35 0 231 241 168 54 chr2 219199493 219199696 -34056887 - LTR16C LTR ERVL -5 486 227 3218 191 26 3 chr2 219200112 219200791 -34055792 - L1MA7 LINE L1 0 6291 5597 3281 205 36 4 chr2 219200817 219201529 -34055054 + L1 LINE L1 4429 5163 -983 283 310 81 31 chr2 219201704 219202019 -34054564 + L1ME LINE L1 5328 5656 -514 22 0 0 0 chr2 219202450 219202472 -34054111 + AT_rich Low_complexity Low_complexity 1 22 0 188 331 60 38 chr2 219203206 219203339 -34053244 - MIR SINE MIR -48 214 79 180 0 0 0 chr2 219203409 219203429 -34053154 + (CAAAAA)n Simple_repeat Simple_repeat 3 22 0 1219 286 70 34 chr2 219203737 219204479 -34052104 + Zaphod DNA AcHobo 1 789 -3242 245 229 0 0 chr2 219204483 219204544 -34052039 + MER115 DNA AcHobo 601 661 -32 2223 105 0 32 chr2 219204729 219205044 -34051539 + AluSx SINE Alu 5 309 -3 193 374 126 5 chr2 219205496 219205702 -34050881 - MIR SINE MIR 0 262 32 318 233 272 0 chr2 219205783 219205886 -34050697 - MER5A DNA MER1_type 0 189 59 249 303 10 40 chr2 219205902 219206001 -34050582 - MIR3 SINE MIR -47 161 66 2433 46 0 3 chr2 219206380 219206688 -34049895 - AluY SINE Alu 0 307 1 740 165 47 0 chr2 219206704 219206831 -34049752 - FLAM_A SINE Alu 0 133 1 254 313 17 61 chr2 219209181 219209296 -34047287 + L2 LINE L2 3203 3312 -1 275 337 96 48 chr2 219209600 219209787 -34046796 + MIR3 SINE MIR 13 208 0 241 389 7 14 chr2 219210036 219210180 -34046403 + MER5A DNA MER1_type 2 144 -45 295 198 121 9 chr2 219211082 219211198 -34045385 + L1ME LINE L1 5292 5420 -742 768 32 0 0 chr2 219211362 219211457 -34045126 - L1PA3 LINE L1 0 6155 6061 6181 26 1 0 chr2 219211457 219212180 -34044403 + L1PA3 LINE L1 5373 6096 -59 2137 38 11 0 chr2 219212218 219212485 -34044098 - L1PA4 LINE L1 -251 5904 5635 2095 35 0 0 chr2 219212485 219212737 -34043846 + L1PA4 LINE L1 5894 6147 -8 2444 79 0 3 chr2 219212843 219213147 -34043436 - AluY SINE Alu -8 303 1 1997 135 0 3 chr2 219213242 219213555 -34043028 - AluSx SINE Alu 0 312 1 315 244 39 0 chr2 219213557 219213635 -34042948 + MLT1I LTR MaLR 79 159 -250 2518 108 11 3 chr2 219214245 219214606 -34041977 + THE1B LTR MaLR 1 364 0 4194 85 4 0 chr2 219214894 219215446 -34041137 + MER41A LTR ERV1 1 554 0 286 254 28 106 chr2 219215492 219215709 -34040874 - L1ME3A LINE L1 -230 5940 5741 180 77 0 0 chr2 219216328 219216354 -34040229 + (TA)n Simple_repeat Simple_repeat 2 27 0 958 191 50 8 chr2 219217668 219217909 -34038674 + HsTC2 DNA Tc2 1650 1900 0 344 299 26 0 chr2 219218140 219218257 -34038326 + LTR67 LTR ERVL 438 557 0 431 288 59 38 chr2 219218475 219218763 -34037820 + L1ME LINE L1 5526 5819 -302 285 283 66 85 chr2 219219368 219219580 -34037003 + HsTC2 DNA Tc2 270 477 -1421 530 279 68 38 chr2 219219660 219219897 -34036686 + HsTC2 DNA Tc2 642 885 -1013 335 174 0 43 chr2 219221479 219221548 -34035035 + L1MC4a LINE L1 7225 7290 -518 645 203 6 44 chr2 219221724 219221882 -34034701 + L1MD3 LINE L1 7368 7519 -476 1885 215 53 0 chr2 219221961 219222393 -34034190 + L1MD3 LINE L1 7527 7981 -14 1047 247 51 66 chr2 219222413 219222921 -34033662 + L1ME2 LINE L1 5665 6161 -5 231 211 53 0 chr2 219223533 219223590 -34032993 - L2 LINE L2 -957 2357 2298 889 187 0 13 chr2 219223644 219223799 -34032784 + AluJo SINE Alu 1 153 -159 936 97 15 15 chr2 219223875 219224009 -34032574 + AluJo SINE Alu 160 293 -19 473 83 0 0 chr2 219224463 219224535 -34032048 - L1MA3 LINE L1 0 6305 6234 21 36 0 0 chr2 219224659 219224687 -34031896 + AT_rich Low_complexity Low_complexity 1 28 0 2055 90 43 0 chr2 219224694 219224972 -34031611 - AluSp SINE Alu -20 293 4 36 0 0 0 chr2 219225051 219225087 -34031496 + AT_rich Low_complexity Low_complexity 1 36 0 348 24 0 0 chr2 219225111 219225152 -34031431 + (CA)n Simple_repeat Simple_repeat 2 42 0 295 380 81 20 chr2 219225190 219225599 -34030984 - L2 LINE L2 -240 3032 2596 1996 140 0 0 chr2 219225613 219225898 -34030685 + AluSg SINE Alu 3 287 -23 407 302 74 74 chr2 219226369 219226872 -34029711 - MLT1J LTR MaLR -8 503 1 633 299 59 18 chr2 219226955 219227176 -34029407 + MIR SINE MIR 33 262 0 2292 100 0 34 chr2 219229193 219229513 -34027070 + AluSc SINE Alu 1 309 0 23 33 0 0 chr2 219229854 219229884 -34026699 + AT_rich Low_complexity Low_complexity 1 30 0 3818 108 10 2 chr2 219230586 219231179 -34025404 + L1PA7 LINE L1 2698 3295 -2851 6849 67 3 1 chr2 219231279 219232584 -34023999 + L1PA7 LINE L1 4845 6151 -3 189 339 70 43 chr2 219233094 219233209 -34023374 - MIR SINE MIR -28 234 117 358 254 53 35 chr2 219235233 219235347 -34021236 + MIR SINE MIR 65 180 -82 1295 185 65 0 chr2 219238917 219239225 -34017358 - MER33 DNA MER1_type -4 320 1 240 245 32 53 chr2 219239270 219239364 -34017219 + MLT1I LTR MaLR 318 409 0 227 140 20 0 chr2 219240541 219240591 -34015992 + (TG)n Simple_repeat Simple_repeat 2 52 0 877 168 6 0 chr2 219241612 219241779 -34014804 + L1MA3 LINE L1 6135 6302 -3 22 0 0 0 chr2 219242248 219242270 -34014313 + AT_rich Low_complexity Low_complexity 1 22 0 444 291 62 56 chr2 219242837 219243229 -34013354 + MLT1H LTR MaLR 38 532 -17 261 358 126 51 chr2 219243255 219243629 -34012954 - L2 LINE L2 -47 3225 2824 2097 113 7 13 chr2 219243761 219244061 -34012522 - AluSq SINE Alu -5 308 11 25 51 0 0 chr2 219244317 219244356 -34012227 + AT_rich Low_complexity Low_complexity 1 39 0 3849 109 213 118 chr2 219244618 219245923 -34010660 + pTR5 LTR ERV1 741 2438 0 279 323 61 12 chr2 219246003 219246259 -34010324 - L1ME LINE L1 -428 5734 5461 196 353 15 0 chr2 219247068 219247136 -34009447 + MIR3 SINE MIR 115 183 -25 1936 104 37 4 chr2 219247403 219247673 -34008910 + AluSq SINE Alu 1 279 -34 2036 74 0 0 chr2 219247673 219247929 -34008654 + AluY SINE Alu 48 303 -8 783 298 33 8 chr2 219248121 219248363 -34008220 + MIR SINE MIR 13 260 -2 186 263 32 74 chr2 219248296 219248391 -34008192 - MIR SINE MIR -6 256 166 * 249 360 172 0 chr2 219249231 219249434 -34007149 + L3b LINE CR1 1296 1533 -50 197 270 140 20 chr2 219249711 219249811 -34006772 - MIR SINE MIR -72 190 79 1052 110 0 0 chr2 219250776 219250921 -34005662 - AluSg/x SINE Alu -10 302 158 554 299 179 14 chr2 219251411 219251702 -34004881 + L2 LINE L2 2539 2877 -437 273 267 238 90 chr2 219251732 219252009 -34004574 + L2 LINE L2 2995 3312 -1 321 367 96 7 chr2 219252193 219252463 -34004120 - L2 LINE L2 -780 2534 2241 198 279 48 58 chr2 219252502 219252606 -34003977 - MIR SINE MIR -57 205 103 198 0 0 0 chr2 219252916 219252938 -34003645 + (GA)n Simple_repeat Simple_repeat 1 22 0 371 148 12 37 chr2 219253589 219253670 -34002913 - MADE1 DNA Mariner -1 79 1 522 286 55 51 chr2 219253750 219253967 -34002616 + MIR SINE MIR 32 249 -13 371 306 72 34 chr2 219253967 219254176 -34002407 - L1ME LINE L1 -313 5808 5592 392 280 143 28 chr2 219255460 219255642 -34000941 - MIR SINE MIR -54 208 6 1800 294 121 25 chr2 219260332 219261834 -33994749 + L1MEc LINE L1 2043 3706 -2509 2447 60 0 29 chr2 219261834 219262150 -33994433 + AluY SINE Alu 1 307 -4 1800 294 121 25 chr2 219262150 219262454 -33994129 + L1MEc LINE L1 3706 3979 -2236 1344 267 75 34 chr2 219262455 219263037 -33993546 + MLT1E2 LTR MaLR 1 626 0 867 291 56 26 chr2 219263044 219263617 -33992966 + L1MEc LINE L1 3983 4572 -1643 2219 86 3 26 chr2 219263728 219264032 -33992551 + AluSp SINE Alu 1 297 -16 335 346 52 16 chr2 219264052 219264361 -33992222 + L1MEc LINE L1 4796 5115 -1100 429 208 212 19 chr2 219264409 219264621 -33991962 + L1MB7 LINE L1 2779 3031 -3115 1732 155 19 0 chr2 219264627 219264936 -33991647 + L1MA4 LINE L1 5975 6289 -11 1799 182 0 3 chr2 219264951 219265278 -33991305 + AluJo SINE Alu 3 312 0 665 278 113 48 chr2 219265280 219266140 -33990443 + L1ME2 LINE L1 792 1707 -4689 704 263 48 52 chr2 219266170 219266501 -33990082 + L1ME2 LINE L1 1756 2086 -4131 1609 189 3 7 chr2 219266501 219266807 -33989776 + AluJo SINE Alu 1 305 -7 704 263 48 52 chr2 219266807 219266999 -33989584 + L1ME2 LINE L1 2086 2277 -3940 971 176 16 0 chr2 219267004 219267197 -33989386 + L1MA8 LINE L1 6091 6286 -5 21 57 0 0 chr2 219267240 219267275 -33989308 + AT_rich Low_complexity Low_complexity 1 35 0 5815 206 64 23 chr2 219267275 219269617 -33986966 + L1MB7 LINE L1 3730 6158 -26 666 294 32 3 chr2 219269628 219269910 -33986673 + L1ME2 LINE L1 2341 2630 -3585 2854 237 31 41 chr2 219270057 219270657 -33985926 - L1ME1 LINE L1 -5 6161 5581 1764 217 18 28 chr2 219270657 219271054 -33985529 + MSTD LTR MaLR 2 394 -2 2854 237 31 41 chr2 219271054 219271655 -33984928 - L1ME1 LINE L1 -585 5581 4975 476 228 63 0 chr2 219271650 219271777 -33984806 + L1ME2 LINE L1 2748 2882 -3333 * 211 66 98 57 chr2 219271779 219271901 -33984682 + (TTTAA)n Simple_repeat Simple_repeat 2 128 0 2184 191 9 85 chr2 219271917 219272447 -33984136 - MLT2B1 LTR ERVL -30 490 1 484 252 40 0 chr2 219272487 219272638 -33983945 + L1ME2 LINE L1 2973 3129 -3086 410 217 26 9 chr2 219272641 219272756 -33983827 + L1MC2 LINE L1 2883 2999 -3147 5088 220 44 11 chr2 219272766 219274752 -33981831 + L1MC2 LINE L1 3884 5932 -412 1583 208 9 6 chr2 219274773 219275105 -33981478 + L1MC2 LINE L1 6002 6334 -10 2185 242 93 20 chr2 219275121 219275988 -33980595 + L1ME2 LINE L1 4548 5489 -744 1584 273 93 45 chr2 219275986 219276791 -33979792 - L1ME LINE L1 -5217 853 10 * 1279 233 14 47 chr2 219276803 219276825 -33979758 + L1ME2 LINE L1 5651 5672 -561 2583 11 0 0 chr2 219276825 219277110 -33979473 + AluYb8 SINE Alu 24 308 -10 1279 233 14 47 chr2 219277110 219277572 -33979011 + L1ME2 LINE L1 5672 6223 -10 394 331 74 6 chr2 219278020 219278202 -33978381 - MIR3 SINE MIR -11 197 4 414 265 147 18 chr2 219278497 219278667 -33977916 - MLT1K LTR MaLR 0 588 397 238 321 38 38 chr2 219278769 219278875 -33977708 - MLT1K LTR MaLR -357 231 126 582 324 159 2 chr2 219279057 219279452 -33977131 + LTR33A LTR ERVL 59 515 -8 243 0 0 0 chr2 219279555 219279582 -33977001 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 860 172 57 0 chr2 219279634 219279791 -33976792 - FRAM SINE Alu 0 166 1 196 269 134 32 chr2 219280042 219280228 -33976355 + MIR3 SINE MIR 4 208 0 400 204 22 124 chr2 219280709 219280846 -33975737 + L2 LINE L2 3191 3313 0 216 0 0 0 chr2 219281506 219281530 -33975053 + (CAG)n Simple_repeat Simple_repeat 3 26 0 332 336 10 0 chr2 219281531 219281635 -33974948 + CT-rich Low_complexity Low_complexity 2 106 0 22 35 0 0 chr2 219283593 219283622 -33972961 + AT_rich Low_complexity Low_complexity 1 29 0 39 22 0 0 chr2 219283732 219283778 -33972805 + AT_rich Low_complexity Low_complexity 1 46 0 195 42 0 0 chr2 219285254 219285278 -33971305 + (TGGG)n Simple_repeat Simple_repeat 1 24 0 242 244 0 37 chr2 219285875 219285957 -33970626 + CT-rich Low_complexity Low_complexity 1 79 0 21 36 0 0 chr2 219286022 219286050 -33970533 + AT_rich Low_complexity Low_complexity 1 28 0 2320 50 0 0 chr2 219286347 219286675 -33969908 - AluY SINE Alu 0 329 2 22 0 0 0 chr2 219286723 219286745 -33969838 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr2 219286944 219286973 -33969610 + AT_rich Low_complexity Low_complexity 1 29 0 185 121 103 69 chr2 219288303 219288361 -33968222 - L2 LINE L2 -588 2726 2667 211 308 55 44 chr2 219288998 219289089 -33967494 - MIR SINE MIR -125 137 46 528 286 48 21 chr2 219290469 219290658 -33965925 - L2 LINE L2 0 3313 3120 354 369 87 10 chr2 219290753 219290948 -33965635 - L2 LINE L2 -337 2977 2768 22 0 0 0 chr2 219291729 219291751 -33964832 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr2 219291803 219291827 -33964756 + AT_rich Low_complexity Low_complexity 1 24 0 236 265 0 0 chr2 219291984 219292033 -33964550 + Alu SINE Alu 139 187 -116 967 205 39 44 chr2 219292033 219292238 -33964345 + AluJo SINE Alu 72 275 -37 180 0 0 0 chr2 219292238 219292258 -33964325 + (TC)n Simple_repeat Simple_repeat 2 21 0 513 89 73 0 chr2 219292258 219292382 -33964201 + (TA)n Simple_repeat Simple_repeat 1 133 0 21 0 0 0 chr2 219292659 219292680 -33963903 + AT_rich Low_complexity Low_complexity 1 21 0 447 41 58 41 chr2 219293343 219293464 -33963119 + (TA)n Simple_repeat Simple_repeat 1 123 0 886 242 47 9 chr2 219293727 219293942 -33962641 - MER58A DNA MER1_type -1 223 1 26 30 0 0 chr2 219295716 219295749 -33960834 + AT_rich Low_complexity Low_complexity 1 33 0 30 45 0 0 chr2 219296315 219296359 -33960224 + AT_rich Low_complexity Low_complexity 1 44 0 299 161 89 0 chr2 219297886 219297942 -33958641 + MIR SINE MIR 90 150 -58 248 377 25 33 chr2 219298190 219298312 -33958271 - L2 LINE L2 -8 3264 3144 699 310 245 22 chr2 219299976 219300567 -33956016 + L2 LINE L2 2139 2861 -453 304 322 22 0 chr2 219300731 219300821 -33955762 + L2 LINE L2 3172 3263 -9 181 300 92 54 chr2 219301058 219301188 -33955395 + MIR SINE MIR 118 252 -10 24 32 0 0 chr2 219302113 219302144 -33954439 + AT_rich Low_complexity Low_complexity 1 31 0 28 29 0 0 chr2 219302247 219302282 -33954301 + AT_rich Low_complexity Low_complexity 1 35 0 418 243 331 0 chr2 219305349 219305485 -33951098 + MER5A DNA MER1_type 7 187 -2 1131 244 68 48 chr2 219305882 219306340 -33950243 - MLT1C LTR MaLR 0 467 1 271 207 103 0 chr2 219306609 219306667 -33949916 + L2 LINE L2 3187 3250 -22 23 54 0 0 chr2 219306977 219307014 -33949569 + AT_rich Low_complexity Low_complexity 1 37 0 989 236 160 44 chr2 219307072 219307338 -33949245 - Charlie7 DNA MER1_type -1936 676 442 2119 122 0 0 chr2 219307338 219307665 -33948918 - AluSq SINE Alu 0 327 1 989 236 160 44 chr2 219307665 219307960 -33948623 - Charlie7 DNA MER1_type -2170 442 48 726 260 89 38 chr2 219308635 219309062 -33947521 + LTR33 LTR ERVL 11 459 -62 24 0 0 0 chr2 219310331 219310355 -33946228 + AT_rich Low_complexity Low_complexity 1 24 0 30 27 0 0 chr2 219311099 219311136 -33945447 + AT_rich Low_complexity Low_complexity 1 37 0 2455 72 3 0 chr2 219311293 219311600 -33944983 + AluY SINE Alu 1 308 -3 2115 103 0 7 chr2 219311776 219312057 -33944526 - AluSx SINE Alu -30 282 4 1920 184 14 19 chr2 219312249 219312619 -33943964 - MLT1A2 LTR MaLR 0 374 7 573 278 8 0 chr2 219312628 219312754 -33943829 - MIR SINE MIR -79 183 57 21 0 0 0 chr2 219313103 219313124 -33943459 + AT_rich Low_complexity Low_complexity 1 21 0 189 337 82 10 chr2 219313334 219313432 -33943151 - MIR SINE MIR -26 236 132 451 306 27 49 chr2 219313697 219313880 -33942703 - MIR3 SINE MIR -3 205 27 216 171 0 0 chr2 219314388 219314423 -33942160 + (CA)n Simple_repeat Simple_repeat 2 36 0 210 302 130 35 chr2 219314487 219314656 -33941927 - MIR SINE MIR 0 262 78 387 308 10 51 chr2 219314976 219315171 -33941412 + MIR SINE MIR 56 242 -20 520 279 0 51 chr2 219316260 219316418 -33940165 + MIR SINE MIR 85 234 -28 850 286 32 12 chr2 219316542 219316794 -33939789 + MIR SINE MIR 5 261 -1 374 141 28 0 chr2 219317974 219318045 -33938538 + CT-rich Low_complexity Low_complexity 4 76 0 2162 118 0 0 chr2 219318183 219318472 -33938111 - AluSx SINE Alu -23 289 1 603 236 60 30 chr2 219318639 219318838 -33937745 - MER3 DNA MER1_type 0 209 5 2111 107 24 0 chr2 219318883 219319172 -33937411 - AluSp SINE Alu -17 296 1 201 213 0 0 chr2 219320407 219320454 -33936129 + (CA)n Simple_repeat Simple_repeat 1 47 0 275 235 17 130 chr2 219322516 219322631 -33933952 - MIR3 SINE MIR -8 200 99 371 247 22 0 chr2 219323800 219323889 -33932694 + MIR SINE MIR 87 177 -85 217 345 104 43 chr2 219324298 219324805 -33931778 + L2 LINE L2 2224 2761 -553 972 241 39 4 chr2 219325130 219325362 -33931221 + MIR SINE MIR 2 241 -21 2506 59 3 3 chr2 219325737 219326043 -33930540 - AluY SINE Alu -5 306 1 708 357 67 16 chr2 219326470 219326845 -33929738 - L3 LINE CR1 -11 1566 1173 24 67 0 0 chr2 219326845 219326890 -33929693 + AT_rich Low_complexity Low_complexity 1 45 0 375 380 67 10 chr2 219327225 219327433 -33929150 + MIR SINE MIR 37 256 -6 224 163 20 0 chr2 219327882 219327931 -33928652 + (TA)n Simple_repeat Simple_repeat 2 51 0 469 319 186 36 chr2 219328350 219328883 -33927700 + L2 LINE L2 2659 3267 -5 24 0 0 0 chr2 219329500 219329524 -33927059 + AT_rich Low_complexity Low_complexity 1 24 0 354 242 30 0 chr2 219329524 219329623 -33926960 - L1MA9 LINE L1 -39 6273 6172 24 0 0 0 chr2 219330994 219331018 -33925565 + AT_rich Low_complexity Low_complexity 1 24 0 348 195 52 18 chr2 219334645 219334761 -33921822 + L1MD3 LINE L1 7897 7995 0 23 0 0 0 chr2 219334816 219334839 -33921744 + AT_rich Low_complexity Low_complexity 1 23 0 1637 174 3 26 chr2 219335138 219335442 -33921141 + AluJb SINE Alu 1 297 -15 656 286 104 22 chr2 219335630 219335861 -33920722 + MIR SINE MIR 12 261 -1 23 54 0 0 chr2 219337190 219337227 -33919356 + AT_rich Low_complexity Low_complexity 1 37 0 252 0 0 0 chr2 219337961 219337989 -33918594 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 235 307 13 0 chr2 219338261 219338336 -33918247 + CT-rich Low_complexity Low_complexity 3 78 0 254 257 69 40 chr2 219338338 219338439 -33918144 - MLT1K LTR MaLR -162 426 323 745 280 219 14 chr2 219338524 219338885 -33917698 - LTR16A LTR ERVL 0 450 16 248 322 107 0 chr2 219340003 219340124 -33916459 - MIR SINE MIR -17 245 112 1026 204 5 5 chr2 219340801 219340997 -33915586 + AluJo SINE Alu 87 282 -30 24 0 0 0 chr2 219340997 219341021 -33915562 + AT_rich Low_complexity Low_complexity 1 24 0 373 75 0 0 chr2 219341748 219341801 -33914782 + Alu SINE Alu 1 53 -255 2021 115 0 0 chr2 219341833 219342111 -33914472 + AluSg SINE Alu 1 278 -32 194 0 39 0 chr2 219342111 219342137 -33914446 + (CAAA)n Simple_repeat Simple_repeat 4 30 0 371 237 160 67 chr2 219343426 219343620 -33912963 + L2 LINE L2 3102 3313 0 1862 136 24 3 chr2 219343658 219343945 -33912638 - AluSc SINE Alu -16 293 1 21262 110 14 47 chr2 219345421 219351864 -33904719 + L1PA7 LINE L1 12 6152 -2 2022 117 7 0 chr2 219351864 219352154 -33904429 + MER41A LTR ERV1 177 468 -86 4256 85 3 0 chr2 219352477 219353053 -33903530 + L1P3 LINE L1 673 1250 -5211 264 348 82 0 chr2 219353061 219353196 -33903387 + MIR SINE MIR 101 246 -16 196 321 101 18 chr2 219353611 219353720 -33902863 - L2 LINE L2 -17 3255 3138 1217 171 103 39 chr2 219354223 219354504 -33902079 - AluJo SINE Alu -2 300 2 1091 233 48 61 chr2 219354538 219354915 -33901668 + MLT1B LTR MaLR 1 372 -18 1890 161 73 59 chr2 219354917 219355339 -33901244 - MSTA LTR MaLR 0 428 1 9023 183 19 11 chr2 219355341 219356966 -33899617 - MSTA-int LTR MaLR -2 1649 11 1892 161 61 89 chr2 219356970 219357410 -33899173 - MSTA LTR MaLR 0 428 1 192 328 0 60 chr2 219357829 219357945 -33898638 + L2 LINE L2 2944 3052 -261 1703 168 31 10 chr2 219358185 219358477 -33898106 + AluJb SINE Alu 1 298 -14 4981 165 27 30 chr2 219359397 219360414 -33896169 - L1MA9 LINE L1 -32 6280 5260 1870 164 3 3 chr2 219360414 219360724 -33895859 - AluJb SINE Alu -2 310 1 4981 165 27 30 chr2 219360724 219361095 -33895488 - L1MA9 LINE L1 -1052 5260 4889 1382 131 0 5 chr2 219361338 219361537 -33895046 + AluSg/x SINE Alu 103 300 -12 500 151 19 19 chr2 219362067 219362173 -33894410 - L1MB3 LINE L1 -3 6180 6075 1703 207 61 101 chr2 219362581 219363113 -33893470 - MER119 DNA MER1_type -7 576 69 2084 154 0 0 chr2 219363113 219363424 -33893159 + AluJb SINE Alu 1 311 -1 1703 207 61 101 chr2 219363424 219363484 -33893099 - MER119 DNA MER1_type -514 69 8 1094 197 128 43 chr2 219364278 219364623 -33891960 - MLT1A2 LTR MaLR 0 374 1 21 36 0 0 chr2 219364794 219364822 -33891761 + AT_rich Low_complexity Low_complexity 1 28 0 182 361 0 14 chr2 219364907 219364979 -33891604 - L2 LINE L2 -1870 1444 1374 252 0 0 0 chr2 219366008 219366036 -33890547 + (CA)n Simple_repeat Simple_repeat 1 28 0 380 219 134 0 chr2 219367256 219367402 -33889181 + HsTC2 DNA Tc2 4 1896 -2 611 315 17 4 chr2 219367699 219367931 -33888652 - L1ME4a LINE L1 -290 5831 5597 1638 172 7 17 chr2 219369002 219369293 -33887290 - AluJo SINE Alu -22 290 3 359 183 65 0 chr2 219369633 219369726 -33886857 + L1MA5 LINE L1 6193 6291 -9 227 241 0 17 chr2 219369730 219369788 -33886795 + MIR SINE MIR 193 249 -13 426 20 0 0 chr2 219369980 219370031 -33886552 + (CA)n Simple_repeat Simple_repeat 2 52 0 27 49 0 0 chr2 219370031 219370072 -33886511 + AT_rich Low_complexity Low_complexity 1 41 0 1442 209 14 30 chr2 219370072 219370368 -33886215 - AluJo SINE Alu -19 293 3 1912 154 38 27 chr2 219372753 219373124 -33883459 - THE1C LTR MaLR 0 375 1 1760 188 0 25 chr2 219373199 219373518 -33883065 - AluJb SINE Alu -1 311 1 21 0 0 0 chr2 219374011 219374032 -33882551 + AT_rich Low_complexity Low_complexity 1 21 0 3076 161 49 16 chr2 219376477 219377049 -33879534 - MER67C LTR ERV1 0 710 120 192 125 0 0 chr2 219377984 219378016 -33878567 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 235 241 195 11 chr2 219378562 219378649 -33877934 - L2 LINE L2 0 3272 3170 25 0 0 0 chr2 219378977 219379002 -33877581 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr2 219379274 219379302 -33877281 + AT_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr2 219380125 219380147 -33876436 + (TTTTTG)n Simple_repeat Simple_repeat 4 25 0 186 103 0 0 chr2 219381739 219381768 -33874815 + (T)n Simple_repeat Simple_repeat 1 29 0 370 368 7 7 chr2 219382355 219382507 -33874076 + MIR3 SINE MIR 34 185 -23 183 167 0 0 chr2 219383900 219383942 -33872641 + T-rich Low_complexity Low_complexity 1 42 0 646 217 60 32 chr2 219384633 219384850 -33871733 + L2 LINE L2 3091 3313 0 998 176 39 0 chr2 219385125 219385307 -33871276 + MER5A DNA MER1_type 1 189 0 242 247 0 43 chr2 219386133 219386226 -33870357 + L1MC4 LINE L1 6614 6702 -1340 329 303 0 0 chr2 219386237 219386326 -33870257 + L1MC4 LINE L1 6614 6702 -1340 198 103 0 0 chr2 219386351 219386380 -33870203 + (CATATA)n Simple_repeat Simple_repeat 2 30 0 1080 313 40 14 chr2 219387482 219387853 -33868730 - MLT1J LTR MaLR -130 381 1 274 383 72 9 chr2 219388094 219388316 -33868267 - MIR SINE MIR -26 236 1 217 171 24 0 chr2 219388604 219388645 -33867938 + GA-rich Low_complexity Low_complexity 3 44 0 1878 177 3 0 chr2 219389380 219389690 -33866893 + AluJb SINE Alu 1 311 -1 665 317 17 13 chr2 219389790 219390020 -33866563 - MIR SINE MIR -26 236 6 23 0 0 0 chr2 219390542 219390565 -33866018 + AT_rich Low_complexity Low_complexity 1 23 0 2177 100 14 0 chr2 219390565 219390854 -33865729 - AluSq SINE Alu -8 305 13 337 250 30 38 chr2 219390897 219391029 -33865554 - L1ME4a LINE L1 -30 6091 5961 529 322 94 9 chr2 219391595 219391828 -33864755 - MIR SINE MIR 0 262 10 1578 156 14 71 chr2 219392310 219392675 -33863908 - L1MB8 LINE L1 0 6178 5835 24 0 0 0 chr2 219393233 219393257 -33863326 + AT_rich Low_complexity Low_complexity 1 24 0 1256 168 11 50 chr2 219393769 219394031 -33862552 - MER4B-int LTR ERV1 -1421 5337 5086 366 107 0 36 chr2 219394036 219394092 -33862491 - LTR47A LTR ERVL -120 332 279 1546 150 0 52 chr2 219394439 219394726 -33861857 + Tigger1 DNA MER2_type 1 272 -2146 211 212 242 0 chr2 219395417 219395483 -33861100 - MIR SINE MIR -152 110 29 24 0 0 0 chr2 219396256 219396280 -33860303 + AT_rich Low_complexity Low_complexity 1 24 0 1869 150 13 13 chr2 219397240 219397547 -33859036 + AluJb SINE Alu 2 308 -4 2433 84 3 0 chr2 219397775 219398084 -33858499 + AluSg SINE Alu 1 310 0 13114 136 23 18 chr2 219398267 219398458 -33858125 - Tigger1 DNA MER2_type 0 2418 2230 2205 108 3 3 chr2 219398458 219398754 -33857829 - AluSx SINE Alu -16 296 1 13114 136 23 18 chr2 219398754 219400959 -33855624 - Tigger1 DNA MER2_type -188 2230 4 2362 80 0 13 chr2 219401371 219401671 -33854912 + AluY SINE Alu 1 296 -15 235 254 51 0 chr2 219401988 219402047 -33854536 + MIR SINE MIR 85 146 -62 21 36 0 0 chr2 219402805 219402833 -33853750 + AT_rich Low_complexity Low_complexity 1 28 0 2445 67 0 10 chr2 219403282 219403596 -33852987 + AluY SINE Alu 1 311 0 306 292 8 8 chr2 219403630 219403750 -33852833 + (TA)n Simple_repeat Simple_repeat 2 121 0 192 340 149 11 chr2 219403902 219403996 -33852587 + MIR SINE MIR 33 139 -69 825 199 31 31 chr2 219405001 219405192 -33851391 + MIR SINE MIR 29 219 -43 1878 138 29 57 chr2 219406022 219406406 -33850177 + THE1C LTR MaLR 1 373 -2 358 312 128 47 chr2 219406442 219406676 -33849907 - MLT1L LTR MaLR -193 422 170 209 332 262 10 chr2 219409203 219409405 -33847178 - MIR SINE MIR -7 255 3 25 31 0 0 chr2 219409818 219409850 -33846733 + AT_rich Low_complexity Low_complexity 1 32 0 2292 99 0 0 chr2 219410004 219410307 -33846276 + AluSg SINE Alu 1 303 -7 2394 69 0 0 chr2 219410431 219410734 -33845849 - AluY SINE Alu -8 303 1 644 230 65 50 chr2 219411247 219411447 -33845136 + MER63A DNA MER1_type 2 204 -6 1160 165 165 34 chr2 219411929 219412195 -33844388 + AluJb SINE Alu 1 301 -1 297 122 51 10 chr2 219412297 219412395 -33844188 + (TA)n Simple_repeat Simple_repeat 1 102 0 1972 150 3 10 chr2 219413453 219413767 -33842816 - AluJo SINE Alu 0 312 1 643 262 65 0 chr2 219413795 219413963 -33842620 + MIR SINE MIR 63 241 -21 23 0 0 0 chr2 219414082 219414105 -33842478 + AT_rich Low_complexity Low_complexity 1 23 0 25 51 0 0 chr2 219414372 219414411 -33842172 + AT_rich Low_complexity Low_complexity 1 39 0 1155 254 113 98 chr2 219415408 219415601 -33840982 - L1MC4 LINE L1 0 8042 7853 2217 116 3 0 chr2 219415601 219415912 -33840671 - AluSx SINE Alu 0 312 1 1155 254 113 98 chr2 219415912 219416777 -33839806 - L1MC4 LINE L1 -189 7853 6959 2033 117 0 54 chr2 219416777 219417093 -33839490 + AluSx SINE Alu 3 301 -11 1155 254 113 98 chr2 219417093 219417328 -33839255 - L1MC4 LINE L1 -1083 6959 6729 990 227 0 5 chr2 219417902 219418118 -33838465 - AluJo SINE Alu -11 301 87 685 243 109 14 chr2 219418848 219419058 -33837525 + MIR SINE MIR 33 262 0 22 0 0 0 chr2 219419557 219419579 -33837004 + AT_rich Low_complexity Low_complexity 1 22 0 2001 138 7 0 chr2 219419843 219420134 -33836449 + AluSx SINE Alu 6 298 -14 546 281 12 30 chr2 219420641 219420741 -33835842 + MIR SINE MIR 98 195 -67 563 92 0 0 chr2 219420741 219420817 -33835766 - MADE1 DNA Mariner -3 77 2 546 281 12 30 chr2 219420817 219420883 -33835700 + MIR SINE MIR 195 261 -1 399 236 49 56 chr2 219421829 219421973 -33834610 + MER5A DNA MER1_type 7 149 -40 243 0 0 0 chr2 219421980 219422007 -33834576 + (A)n Simple_repeat Simple_repeat 1 27 0 1793 180 3 10 chr2 219422636 219422941 -33833642 - AluJo SINE Alu -7 305 3 21 36 0 0 chr2 219426266 219426294 -33830289 + AT_rich Low_complexity Low_complexity 1 28 0 748 305 67 32 chr2 219426771 219427056 -33829527 - L2 LINE L2 -8 3305 3011 433 250 92 0 chr2 219427767 219427887 -33828696 + MIR SINE MIR 47 177 -85 360 231 140 42 chr2 219428719 219428862 -33827721 - L1ME3 LINE L1 -84 6078 5922 563 205 0 1 chr2 219428868 219428980 -33827603 - L1ME3 LINE L1 -549 5617 5507 2337 100 10 0 chr2 219430666 219431017 -33825566 - AluSx SINE Alu 0 354 1 1958 184 26 3 chr2 219431042 219431428 -33825155 - L1MB7 LINE L1 -17 6167 5773 358 111 0 74 chr2 219431447 219431528 -33825055 - L1MA7 LINE L1 -3 6288 6214 1517 197 38 80 chr2 219431528 219431856 -33824727 - L1MA9 LINE L1 -216 6096 5789 282 29 0 0 chr2 219431856 219431891 -33824692 + (CA)n Simple_repeat Simple_repeat 2 36 0 1517 197 38 80 chr2 219431891 219431988 -33824595 - L1MA9 LINE L1 -523 5789 5689 243 182 30 0 chr2 219432044 219432110 -33824473 - MER116 DNA Mariner 0 80 13 28 29 0 0 chr2 219432437 219432472 -33824111 + AT_rich Low_complexity Low_complexity 1 35 0 2515 52 7 0 chr2 219432663 219432968 -33823615 + AluY SINE Alu 1 307 -4 644 293 99 14 chr2 219433117 219433411 -33823172 - L2 LINE L2 0 3313 2995 185 310 65 45 chr2 219433665 219433685 -33822898 + L2 LINE L2 3156 3174 -139 2104 98 11 21 chr2 219433685 219433970 -33822613 - AluSx SINE Alu -30 282 1 185 310 65 45 chr2 219433970 219434104 -33822479 + L2 LINE L2 3174 3313 0 21 57 0 0 chr2 219435012 219435047 -33821536 + AT_rich Low_complexity Low_complexity 1 35 0 277 246 130 0 chr2 219435566 219435635 -33820948 + MIR3 SINE MIR 81 158 -50 294 95 0 0 chr2 219436681 219436723 -33819860 + (TG)n Simple_repeat Simple_repeat 2 43 0 21 0 0 0 chr2 219437583 219437604 -33818979 + AT_rich Low_complexity Low_complexity 1 21 0 313 314 23 0 chr2 219439477 219439563 -33817020 + L2 LINE L2 3218 3305 -8 545 0 15 0 chr2 219440063 219440128 -33816455 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 386 299 51 8 chr2 219440249 219440366 -33816217 - MIR SINE MIR -28 234 113 707 61 0 10 chr2 219440540 219440638 -33815945 + (TCTA)n Simple_repeat Simple_repeat 4 100 0 21 0 0 0 chr2 219440689 219440710 -33815873 + AT_rich Low_complexity Low_complexity 1 21 0 2484 104 26 3 chr2 219441194 219441577 -33815006 - L1PA16 LINE L1 0 6166 5775 280 218 13 13 chr2 219441848 219441926 -33814657 + MER116 DNA Mariner 3 80 0 282 323 71 66 chr2 219441939 219442317 -33814266 - L2 LINE L2 -510 2804 2425 402 315 45 0 chr2 219442334 219442445 -33814138 + L2 LINE L2 3155 3270 -2 338 217 36 65 chr2 219442959 219443097 -33813486 - L1ME4a LINE L1 -6 6115 5982 214 254 218 9 chr2 219443459 219443569 -33813014 - MIR SINE MIR -21 241 109 222 274 0 16 chr2 219444086 219444148 -33812435 - L2 LINE L2 -94 3219 3159 195 365 0 0 chr2 219444151 219444214 -33812369 - L2 LINE L2 -616 2698 2636 560 224 178 13 chr2 219444216 219444368 -33812215 - MER5A DNA MER1_type -3 186 10 203 0 0 36 chr2 219445934 219445962 -33810621 + (TTTTTG)n Simple_repeat Simple_repeat 3 29 0 367 331 40 57 chr2 219446864 219447039 -33809544 - MIR SINE MIR -81 181 10 553 219 77 66 chr2 219447766 219447815 -33808768 - MER3 DNA MER1_type -11 198 151 2185 110 3 0 chr2 219447815 219448107 -33808476 - AluSp SINE Alu -20 293 1 553 219 77 66 chr2 219448107 219448253 -33808330 - MER3 DNA MER1_type -58 151 1 294 390 21 27 chr2 219448450 219448504 -33808079 - MIR3 SINE MIR -3 205 152 253 60 0 40 chr2 219448504 219448554 -33808029 + (TTTTG)n Simple_repeat Simple_repeat 2 49 0 294 390 21 27 chr2 219448554 219448686 -33807897 - MIR3 SINE MIR -56 152 20 824 194 50 39 chr2 219448698 219448878 -33807705 + MER20 DNA MER1_type 28 209 -10 209 305 107 61 chr2 219448878 219449009 -33807574 + L2 LINE L2 3171 3307 -6 508 235 117 17 chr2 219449203 219449382 -33807201 - HAL1b LINE L1 -406 942 746 984 177 4 121 chr2 219449591 219449839 -33806744 - MER58A DNA MER1_type -2 222 4 712 287 80 108 chr2 219449966 219450740 -33805843 - HAL1 LINE L1 -847 1660 909 35 24 0 0 chr2 219450794 219450836 -33805747 + AT_rich Low_complexity Low_complexity 1 42 0 803 204 0 0 chr2 219450974 219451106 -33805477 + AluJo SINE Alu 2 133 -169 270 136 0 0 chr2 219451107 219451151 -33805432 + (TATATG)n Simple_repeat Simple_repeat 4 47 0 591 77 33 55 chr2 219451165 219451348 -33805235 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 400 205 27 0 chr2 219451351 219451463 -33805120 + (TA)n Simple_repeat Simple_repeat 1 115 0 928 172 80 0 chr2 219451464 219451627 -33804956 + AluJo SINE Alu 127 302 -10 6021 60 4 4 chr2 219452874 219453591 -33802992 + L1PA6 LINE L1 5436 6152 -2 886 240 61 67 chr2 219454343 219454655 -33801928 + MLT1J LTR MaLR 1 310 -201 388 159 0 14 chr2 219454663 219454732 -33801851 + MLT1J LTR MaLR 432 499 -12 396 364 83 15 chr2 219454848 219455175 -33801408 + L2 LINE L2 2495 2843 -471 290 347 132 21 chr2 219455232 219455466 -33801117 + L2 LINE L2 2909 3190 -82 2192 125 0 3 chr2 219455466 219455777 -33800806 - AluSg SINE Alu 0 310 1 290 347 132 21 chr2 219455777 219455868 -33800715 + L2 LINE L2 3190 3270 -2 195 0 27 54 chr2 219455881 219455918 -33800665 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 8013 18 1 0 chr2 219455920 219456838 -33799745 - L1PA3 LINE L1 0 6155 5237 208 275 0 0 chr2 219457182 219457222 -33799361 + L2 LINE L2 3217 3256 -16 304 271 145 36 chr2 219458485 219458651 -33797932 + MIR SINE MIR 79 262 0 24 0 0 0 chr2 219458675 219458699 -33797884 + AT_rich Low_complexity Low_complexity 1 24 0 795 219 43 6 chr2 219463840 219464004 -33792579 + AluJb SINE Alu 120 289 -23 21 36 0 0 chr2 219464434 219464462 -33792121 + AT_rich Low_complexity Low_complexity 1 28 0 1966 139 4 0 chr2 219464898 219465207 -33791376 - AluSq SINE Alu 0 310 1 199 269 15 60 chr2 219465596 219465663 -33790920 + MIR SINE MIR 48 111 -151 1261 161 9 9 chr2 219465764 219465975 -33790608 - AluJo SINE Alu -17 295 85 27 62 0 0 chr2 219466693 219466741 -33789842 + AT_rich Low_complexity Low_complexity 1 48 0 1848 168 96 17 chr2 219466794 219467210 -33789373 - L1MB7 LINE L1 -1 6183 5735 207 347 13 0 chr2 219467230 219467305 -33789278 - MIR3 SINE MIR -25 183 108 448 314 103 24 chr2 219467446 219467874 -33788709 - L2 LINE L2 -76 3196 2734 307 331 21 35 chr2 219468674 219468819 -33787764 - MER5A DNA MER1_type -11 178 36 * 426 313 15 8 chr2 219468703 219468837 -33787746 + MER5A DNA MER1_type 49 183 -6 28 29 0 0 chr2 219468937 219468972 -33787611 + AT_rich Low_complexity Low_complexity 1 35 0 252 77 0 0 chr2 219470712 219470751 -33785832 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 252 331 0 58 chr2 219473018 219473100 -33783483 - MIR SINE MIR -47 215 145 2881 186 23 53 chr2 219473100 219473754 -33782829 + LTR27 LTR ERV1 3 636 0 252 331 0 58 chr2 219473754 219473825 -33782758 - MIR SINE MIR -117 145 71 262 192 19 0 chr2 219474276 219474328 -33782255 - MLT1B LTR MaLR 0 390 338 * 2080 151 149 44 chr2 219474323 219474759 -33781824 - MER39B LTR ERV1 -171 482 1 1348 143 101 62 chr2 219474760 219475067 -33781516 - MER31B LTR ERV1 -144 322 4 762 176 65 53 chr2 219475108 219475278 -33781305 - MLT1B LTR MaLR -216 174 3 222 242 16 16 chr2 219475651 219475713 -33780870 + GA-rich Low_complexity Low_complexity 4 65 0 5043 139 19 11 chr2 219476066 219476892 -33779691 + L1MA8 LINE L1 5456 6288 -3 36 40 0 0 chr2 219477084 219477134 -33779449 + AT_rich Low_complexity Low_complexity 1 50 0 227 287 0 46 chr2 219477375 219477462 -33779121 + MLT1I LTR MaLR 128 210 -199 1336 160 0 0 chr2 219478381 219478575 -33778008 + AluSx SINE Alu 1 194 -118 231 61 0 0 chr2 219484380 219484413 -33772170 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 318 87 0 0 chr2 219487409 219487455 -33769128 + (TCCC)n Simple_repeat Simple_repeat 2 47 0 566 87 0 19 chr2 219488627 219488731 -33767852 + (CTCG)n Simple_repeat Simple_repeat 3 104 0 378 0 0 0 chr2 219492713 219492755 -33763828 + (TC)n Simple_repeat Simple_repeat 2 43 0 3545 204 20 3 chr2 219494875 219495557 -33761026 + MLT1-int LTR MaLR 194 887 -484 528 232 70 79 chr2 219495650 219495978 -33760605 + L1M4 LINE L1 5004 5328 -818 1665 85 0 9 chr2 219496067 219496278 -33760305 + AluY SINE Alu 1 209 -102 1962 56 0 0 chr2 219496278 219496509 -33760074 + MER11B LTR ERVK 1 231 -1005 2227 119 0 0 chr2 219498114 219498407 -33758176 - AluSx SINE Alu -19 293 1 651 247 79 0 chr2 219499246 219499424 -33757159 + MIR SINE MIR 71 262 0 879 265 9 14 chr2 219499975 219500186 -33756397 - MER58A DNA MER1_type -11 213 4 21 57 0 0 chr2 219500186 219500221 -33756362 + AT_rich Low_complexity Low_complexity 1 35 0 199 176 0 39 chr2 219500813 219500864 -33755719 + MIR SINE MIR 182 230 -32 490 279 0 52 chr2 219502262 219502416 -33754167 - MIR SINE MIR -8 254 109 21 0 0 0 chr2 219502961 219502982 -33753601 + AT_rich Low_complexity Low_complexity 1 21 0 1983 120 11 3 chr2 219502982 219503266 -33753317 + AluSg SINE Alu 1 286 -24 257 281 43 0 chr2 219503511 219503617 -33752966 - L1ME3A LINE L1 -232 5938 5827 326 281 87 0 chr2 219504332 219504455 -33752128 - MIR SINE MIR -65 143 3 212 280 10 60 chr2 219504507 219504607 -33751976 - L2 LINE L2 -1 3312 3218 1879 64 4 4 chr2 219504931 219505165 -33751418 + AluSg SINE Alu 1 234 -76 547 318 76 30 chr2 219505311 219505613 -33750970 + L2 LINE L2 2536 2851 -463 197 161 107 36 chr2 219505607 219505663 -33750920 + L2 LINE L2 3203 3262 -51 * 270 0 0 0 chr2 219507851 219507881 -33748702 + (A)n Simple_repeat Simple_repeat 1 30 0 858 279 154 21 chr2 219511160 219511536 -33745047 - MLT1J2 LTR MaLR -24 426 1 1074 149 5 54 chr2 219511737 219511959 -33744624 + AluJo SINE Alu 88 298 -14 197 65 32 0 chr2 219513394 219513425 -33743158 + (TA)n Simple_repeat Simple_repeat 1 32 0 1902 153 0 0 chr2 219514006 219514287 -33742296 + AluSx SINE Alu 1 281 -31 654 165 0 0 chr2 219514288 219514415 -33742168 + (ATAAG)n Simple_repeat Simple_repeat 5 131 0 22 94 0 0 chr2 219514669 219514733 -33741850 + AT_rich Low_complexity Low_complexity 1 64 0 289 395 25 32 chr2 219515589 219515746 -33740837 + L2 LINE L2 3111 3266 -6 466 159 0 0 chr2 219515945 219516014 -33740569 - AluJ/FLAM SINE Alu -242 70 2 21 0 0 0 chr2 219516242 219516263 -33740320 + AT_rich Low_complexity Low_complexity 1 21 0 524 294 53 16 chr2 219516631 219516818 -33739765 - L2 LINE L2 -1 3271 3078 22 56 0 0 chr2 219517181 219517217 -33739366 + AT_rich Low_complexity Low_complexity 1 36 0 460 284 0 57 chr2 219517238 219517379 -33739204 - L3 LINE CR1 -13 1564 1432 21 0 0 0 chr2 219518255 219518276 -33738307 + AT_rich Low_complexity Low_complexity 1 21 0 245 309 47 25 chr2 219518316 219518463 -33738120 - MIR SINE MIR -32 176 28 1223 231 64 10 chr2 219519007 219519302 -33737281 + AluJo SINE Alu 1 311 -1 318 327 27 18 chr2 219520865 219520975 -33735608 - MER5A DNA MER1_type 0 189 79 599 158 0 0 chr2 219521437 219521538 -33735045 + AluSg/x SINE Alu 200 300 -9 1689 177 6 37 chr2 219522750 219523072 -33733511 + AluJb SINE Alu 1 312 0 207 0 0 0 chr2 219523628 219523651 -33732932 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2716 116 34 2 chr2 219523743 219524156 -33732427 - MSTA LTR MaLR -2 426 1 21 36 0 0 chr2 219524809 219524837 -33731746 + AT_rich Low_complexity Low_complexity 1 28 0 2086 108 10 3 chr2 219524950 219525245 -33731338 - AluSg SINE Alu -13 297 1 1411 113 0 56 chr2 219525430 219525661 -33730922 + AluSg/x SINE Alu 90 307 -3 1346 173 97 35 chr2 219525871 219526160 -33730423 - AluJo SINE Alu -3 309 3 1687 193 120 10 chr2 219527260 219527669 -33728914 + L1MC3 LINE L1 7324 7777 -8 351 258 158 0 chr2 219528304 219528424 -33728159 - MIR SINE MIR -2 260 122 522 30 0 0 chr2 219529318 219529384 -33727199 - L1PA6 LINE L1 0 6154 6089 231 61 0 0 chr2 219529709 219529742 -33726841 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 191 307 100 57 chr2 219530700 219530840 -33725743 - L2 LINE L2 0 3272 3127 1806 217 34 24 chr2 219530933 219531315 -33725268 + MER119 DNA MER1_type 6 391 -192 21 0 0 0 chr2 219531392 219531413 -33725170 + AT_rich Low_complexity Low_complexity 1 21 0 216 189 0 0 chr2 219531678 219531715 -33724868 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 1802 157 25 3 chr2 219533079 219533365 -33723218 + AluJb SINE Alu 1 292 -20 5761 139 15 7 chr2 219533624 219534759 -33721824 - L1PB4 LINE L1 -2 6154 5006 21 0 0 0 chr2 219535335 219535356 -33721227 + AT_rich Low_complexity Low_complexity 1 21 0 2211 86 10 0 chr2 219535359 219535649 -33720934 - AluSq SINE Alu -20 293 1 501 315 18 22 chr2 219535782 219535988 -33720595 - MIR SINE MIR -50 212 6 2284 62 3 0 chr2 219536601 219536889 -33719694 + AluY SINE Alu 3 291 -20 2488 39 3 10 chr2 219537226 219537535 -33719048 - AluY SINE Alu -4 307 1 2251 48 0 37 chr2 219537542 219537884 -33718699 - AluY SINE Alu 0 331 1 21 71 0 0 chr2 219539497 219539539 -33717044 + AT_rich Low_complexity Low_complexity 1 42 0 207 100 0 0 chr2 219539794 219539824 -33716759 + (TA)n Simple_repeat Simple_repeat 2 31 0 2125 133 3 0 chr2 219541108 219541409 -33715174 + AluSx SINE Alu 1 302 -10 2170 89 3 26 chr2 219541528 219541831 -33714752 + AluSc SINE Alu 12 307 -2 22 56 0 0 chr2 219543678 219543714 -33712869 + AT_rich Low_complexity Low_complexity 1 36 0 264 59 0 0 chr2 219546614 219546648 -33709935 + (CA)n Simple_repeat Simple_repeat 1 34 0 659 296 32 0 chr2 219549280 219549469 -33707114 - MIR SINE MIR -49 213 19 491 323 77 0 chr2 219551205 219551400 -33705183 - MIR SINE MIR -28 234 25 381 43 0 0 chr2 219551455 219551502 -33705081 + (TGGA)n Simple_repeat Simple_repeat 4 50 0 3248 72 18 13 chr2 219552932 219553379 -33703204 + L1PA13 LINE L1 5696 6144 -19 468 0 0 0 chr2 219553561 219553613 -33702970 + (TA)n Simple_repeat Simple_repeat 2 53 0 24 53 0 0 chr2 219553707 219553745 -33702838 + AT_rich Low_complexity Low_complexity 1 38 0 529 161 9 9 chr2 219554176 219554288 -33702295 + (TAGA)n Simple_repeat Simple_repeat 2 113 0 373 162 0 54 chr2 219555023 219555097 -33701486 - MLT1A2 LTR MaLR -304 70 1 638 87 0 19 chr2 219556164 219556268 -33700315 + (TAGA)n Simple_repeat Simple_repeat 4 105 0 22 0 0 0 chr2 219557999 219558021 -33698562 + AT_rich Low_complexity Low_complexity 1 22 0 369 274 28 28 chr2 219558074 219558180 -33698403 + L2 LINE L2 3207 3312 -1 420 259 181 72 chr2 219558952 219559070 -33697513 - L2 LINE L2 0 3313 3209 2062 101 4 0 chr2 219559070 219559347 -33697236 + AluSx SINE Alu 21 298 -14 420 259 181 72 chr2 219559347 219559675 -33696908 - L2 LINE L2 -104 3209 2818 27 81 0 0 chr2 219560762 219560824 -33695759 + AT_rich Low_complexity Low_complexity 1 62 0 24 0 0 0 chr2 219561709 219561733 -33694850 + AT_rich Low_complexity Low_complexity 1 24 0 278 284 23 11 chr2 219561833 219561921 -33694662 - MIR SINE MIR -35 227 139 30 0 0 0 chr2 219562147 219562177 -33694406 + AT_rich Low_complexity Low_complexity 1 30 0 198 103 0 0 chr2 219565041 219565070 -33691513 + (GA)n Simple_repeat Simple_repeat 2 30 0 22 80 0 0 chr2 219566019 219566069 -33690514 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr2 219567958 219567979 -33688604 + AT_rich Low_complexity Low_complexity 1 21 0 207 139 0 0 chr2 219569179 219569215 -33687368 + (A)n Simple_repeat Simple_repeat 1 36 0 22 0 0 0 chr2 219573198 219573220 -33683363 + AT_rich Low_complexity Low_complexity 1 22 0 2073 91 27 30 chr2 219574692 219574989 -33681594 - AluSg SINE Alu -14 296 1 600 242 178 25 chr2 219577671 219578026 -33678557 - L1ME4a LINE L1 -169 5952 5544 28 0 0 0 chr2 219578113 219578141 -33678442 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 219578202 219578224 -33678359 + AT_rich Low_complexity Low_complexity 1 22 0 274 332 122 55 chr2 219578683 219578921 -33677662 + MIR SINE MIR 9 262 0 254 175 0 0 chr2 219579348 219579413 -33677170 - L1MA2 LINE L1 -1 6302 6238 1287 164 27 11 chr2 219580805 219581067 -33675516 - L1PA16 LINE L1 -7 6159 5894 231 229 25 41 chr2 219581715 219581837 -33674746 + (TATAA)n Simple_repeat Simple_repeat 1 120 0 237 325 149 16 chr2 219581857 219582045 -33674538 + MIR SINE MIR 50 262 0 25 31 0 0 chr2 219582633 219582665 -33673918 + AT_rich Low_complexity Low_complexity 1 32 0 267 270 104 31 chr2 219583220 219583383 -33673200 - MIR SINE MIR -3 259 85 415 301 237 3 chr2 219585173 219585489 -33671094 + L3 LINE CR1 1168 1557 -20 21 36 0 0 chr2 219588553 219588581 -33668002 + AT_rich Low_complexity Low_complexity 1 28 0 2111 85 0 41 chr2 219590748 219591065 -33665518 + AluSq SINE Alu 1 305 0 193 222 0 22 chr2 219591561 219591606 -33664977 - MIR3 SINE MIR -49 159 116 21 36 0 0 chr2 219592014 219592042 -33664541 + AT_rich Low_complexity Low_complexity 1 28 0 1442 268 39 30 chr2 219592210 219592646 -33663937 - L2 LINE L2 -3 3310 2871 406 349 76 16 chr2 219592729 219592978 -33663605 + L2 LINE L2 2427 2690 -624 297 278 168 46 chr2 219592979 219593152 -33663431 + L2 LINE L2 3120 3313 0 1491 101 41 5 chr2 219593267 219593486 -33663097 - MER30 DNA MER1_type 0 230 4 209 319 147 26 chr2 219593486 219593602 -33662981 + MIR3 SINE MIR 14 143 -65 1270 166 207 30 chr2 219593944 219594306 -33662277 - MSTA LTR MaLR 0 428 3 189 302 174 0 chr2 219594557 219594643 -33661940 - L2 LINE L2 0 3272 3172 2534 49 0 3 chr2 219597198 219597503 -33659080 + AluY SINE Alu 1 304 -7 543 214 0 0 chr2 219598773 219598862 -33657721 - 5S rRNA rRNA -31 90 2 225 0 0 0 chr2 219601425 219601450 -33655133 + (GA)n Simple_repeat Simple_repeat 2 26 0 299 292 97 9 chr2 219603040 219603153 -33653430 + MER103 DNA DNA 41 163 -3 1607 176 7 25 chr2 219603322 219603615 -33652968 + AluJo SINE Alu 14 292 -20 1128 173 5 30 chr2 219604784 219604986 -33651597 + AluJo SINE Alu 98 294 -18 21 36 0 0 chr2 219607806 219607834 -33648749 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 219608002 219608030 -33648553 + AT_rich Low_complexity Low_complexity 1 28 0 297 0 0 0 chr2 219610302 219610335 -33646248 + (CA)n Simple_repeat Simple_repeat 1 33 0 25 0 0 0 chr2 219610997 219611022 -33645561 + AT_rich Low_complexity Low_complexity 1 25 0 1034 221 46 4 chr2 219611181 219611444 -33645139 - MLT1K LTR MaLR 0 588 315 306 220 358 0 chr2 219611784 219611893 -33644690 + MER5A DNA MER1_type 41 188 -1 309 171 293 0 chr2 219614351 219614433 -33642150 - MIR SINE MIR -115 147 42 386 370 137 19 chr2 219616664 219617188 -33639395 - L2 LINE L2 -357 2957 2372 447 284 47 7 chr2 219620534 219620682 -33635901 - MIR SINE MIR -44 218 65 1173 34 61 0 chr2 219620729 219620876 -33635707 + L1PA5 LINE L1 5990 6145 -9 29 47 0 0 chr2 219620876 219620919 -33635664 + AT_rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr2 219621013 219621035 -33635548 + AT_rich Low_complexity Low_complexity 1 22 0 351 327 0 10 chr2 219621092 219621196 -33635387 + MIR SINE MIR 53 155 -107 225 0 0 0 chr2 219621198 219621223 -33635360 + (CA)n Simple_repeat Simple_repeat 2 26 0 3278 83 11 0 chr2 219621247 219621694 -33634889 + L1PA10 LINE L1 5712 6163 -5 197 0 71 0 chr2 219621746 219621774 -33634809 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 1757 176 0 24 chr2 219621776 219622065 -33634518 - AluJo SINE Alu -30 282 1 392 263 109 40 chr2 219622188 219622367 -33634216 - L1ME4a LINE L1 -186 5935 5770 2125 80 0 21 chr2 219622367 219622682 -33633901 - AluY SINE Alu 0 310 2 392 263 109 40 chr2 219622682 219622851 -33633732 - L1ME4a LINE L1 -351 5770 5562 212 0 36 0 chr2 219623010 219623038 -33633545 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 40881 32 23 2 chr2 219623038 219629050 -33627533 - L1PA2 LINE L1 -18 6137 1 1100 213 47 0 chr2 219629088 219629346 -33627237 - MER58B DNA MER1_type -1 340 71 1818 174 13 0 chr2 219629346 219629650 -33626933 + AluJb SINE Alu 1 308 -4 308 293 99 53 chr2 219630245 219630414 -33626169 - MIR SINE MIR -62 146 20 3799 191 21 6 chr2 219630650 219631374 -33625209 + MER21B LTR ERV1 1 735 -128 1473 280 58 38 chr2 219631824 219632639 -33623944 + L1PA13 LINE L1 1 1429 -5358 15719 226 19 10 chr2 219632696 219637235 -33619348 + L1PA13 LINE L1 1438 6035 -786 514 254 71 41 chr2 219637773 219637942 -33618641 - MER5B DNA MER1_type -3 175 2 23 33 0 0 chr2 219638863 219638893 -33617690 + AT_rich Low_complexity Low_complexity 1 30 0 812 243 29 38 chr2 219639796 219639826 -33616757 - MIR SINE MIR -37 225 196 1252 243 69 67 chr2 219639826 219640378 -33616205 + MLT1H1 LTR MaLR 1 553 -2 812 243 29 38 chr2 219640378 219640557 -33616026 - MIR SINE MIR -66 196 18 30 0 0 0 chr2 219641206 219641236 -33615347 + AT_rich Low_complexity Low_complexity 1 30 0 265 341 0 0 chr2 219641259 219641385 -33615198 - L1ME LINE L1 -290 5880 5755 339 324 113 38 chr2 219641431 219641724 -33614859 - L1ME LINE L1 -456 5706 5392 509 291 89 31 chr2 219641766 219642148 -33614435 - L1ME LINE L1 -812 5334 4931 3148 43 10 8 chr2 219642662 219643060 -33613523 + L1PA4 LINE L1 5757 6155 0 187 250 46 145 chr2 219643155 219643307 -33613276 - L2 LINE L2 -421 2893 2757 316 298 106 9 chr2 219644415 219644596 -33611987 + MIR SINE MIR 2 245 -17 3007 158 42 7 chr2 219644981 219645576 -33611007 + L1MC2 LINE L1 5561 6176 -168 497 195 172 35 chr2 219645629 219645798 -33610785 + L1MC2 LINE L1 6153 6344 0 624 159 0 18 chr2 219645817 219645930 -33610653 - MLT1E3 LTR MaLR -513 111 1 243 360 43 12 chr2 219646008 219646169 -33610414 + L2 LINE L2 2145 2310 -1004 359 275 217 14 chr2 219646307 219646352 -33610231 - MIR SINE MIR -8 254 219 1545 94 0 21 chr2 219646352 219646586 -33609997 - L1PA13 LINE L1 0 6163 5935 359 275 217 14 chr2 219646586 219646747 -33609836 - MIR SINE MIR -43 219 6 1711 179 17 3 chr2 219647469 219647770 -33608813 + AluJb SINE Alu 1 305 -7 493 86 12 12 chr2 219647770 219647851 -33608732 + (GGA)n Simple_repeat Simple_repeat 1 81 0 209 200 20 0 chr2 219649061 219649111 -33607472 + (CCG)n Simple_repeat Simple_repeat 2 52 0 761 269 199 19 chr2 219650075 219650507 -33606076 - L2 LINE L2 0 3313 2804 21 95 0 0 chr2 219650663 219650726 -33605857 + AT_rich Low_complexity Low_complexity 1 63 0 225 211 18 18 chr2 219652107 219652164 -33604419 + CT-rich Low_complexity Low_complexity 1 57 0 202 139 0 23 chr2 219652683 219652726 -33603857 + (TTTTTG)n Simple_repeat Simple_repeat 2 43 0 285 270 20 30 chr2 219652971 219653071 -33603512 - MIR SINE MIR -43 219 121 2261 119 3 0 chr2 219653141 219653452 -33603131 + AluSx SINE Alu 1 312 0 299 338 0 0 chr2 219653729 219653806 -33602777 + L2 LINE L2 2996 3072 -241 181 226 0 0 chr2 219653818 219653849 -33602734 - MIR SINE MIR -224 38 8 182 398 0 0 chr2 219654592 219654680 -33601903 + L2 LINE L2 2730 2817 -497 2050 133 10 0 chr2 219654962 219655256 -33601327 + AluSx SINE Alu 1 297 -15 435 239 37 0 chr2 219655260 219655394 -33601189 - Charlie4 DNA MER1_type -7 1954 1816 229 345 11 0 chr2 219655401 219655488 -33601095 + MIR SINE MIR 34 121 -141 794 288 96 65 chr2 219656026 219656515 -33600068 + L2 LINE L2 2804 3307 -6 371 325 107 6 chr2 219656721 219656890 -33599693 + MIR SINE MIR 10 195 -67 25 31 0 0 chr2 219657156 219657188 -33599395 + AT_rich Low_complexity Low_complexity 1 32 0 1071 191 9 57 chr2 219657348 219657578 -33599005 - MER20 DNA MER1_type 0 219 1 279 313 150 10 chr2 219658084 219658223 -33598360 - MIR SINE MIR -62 146 35 788 358 142 18 chr2 219658280 219659485 -33597098 + L2 LINE L2 1891 3268 -4 28 0 0 0 chr2 219659557 219659585 -33596998 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 219659624 219659645 -33596938 + AT_rich Low_complexity Low_complexity 1 21 0 380 272 0 22 chr2 219659760 219659852 -33596731 - L2 LINE L2 -9 3304 3215 1938 296 103 5 chr2 219660768 219661549 -33595034 + L2 LINE L2 2259 3112 -201 457 204 122 87 chr2 219661860 219662032 -33594551 - MER5B DNA MER1_type 0 178 1 189 250 0 0 chr2 219662249 219662285 -33594298 - L2 LINE L2 -8 3305 3270 710 172 25 51 chr2 219663213 219663370 -33593213 + MIR SINE MIR 87 239 -23 373 282 216 22 chr2 219663563 219663744 -33592839 + MIR SINE MIR 40 255 -7 29 47 0 0 chr2 219663760 219663803 -33592780 + AT_rich Low_complexity Low_complexity 1 43 0 378 42 0 0 chr2 219663822 219663870 -33592713 + (TA)n Simple_repeat Simple_repeat 2 49 0 512 238 111 39 chr2 219664173 219664354 -33592229 + MIR SINE MIR 2 195 -67 3093 145 16 29 chr2 219664355 219664915 -33591668 + Tigger3b DNA MER2_type 2 554 -677 2393 71 3 19 chr2 219664976 219665285 -33591298 + AluSp SINE Alu 1 304 -9 43 35 0 0 chr2 219665377 219665434 -33591149 + AT_rich Low_complexity Low_complexity 1 57 0 3148 105 123 23 chr2 219665439 219666050 -33590533 + Tigger3b DNA MER2_type 561 1232 0 213 290 65 0 chr2 219666050 219666112 -33590471 + MIR SINE MIR 197 262 0 317 256 60 15 chr2 219667292 219667425 -33589158 + HsTC2 DNA Tc2 18 156 -1742 1416 203 90 14 chr2 219667427 219667840 -33588743 + HsTC2 DNA Tc2 1279 1898 0 2199 64 4 4 chr2 219668423 219668690 -33587893 + AluY SINE Alu 44 310 -1 1280 127 72 99 chr2 219668738 219668868 -33587715 + MER33 DNA MER1_type 1 133 -2452 1674 203 14 0 chr2 219668868 219669159 -33587424 + AluJb SINE Alu 6 300 -12 1280 127 72 99 chr2 219669159 219669177 -33587406 + MER33 DNA MER1_type 133 150 -2435 2356 61 0 0 chr2 219669177 219669486 -33587097 - AluY SINE Alu 0 311 3 1280 127 72 99 chr2 219669486 219669667 -33586916 + MER33 DNA MER1_type 150 323 -1 1676 166 31 41 chr2 219671346 219671418 -33585165 - L1MB7 LINE L1 0 6184 6113 2488 99 23 0 chr2 219671418 219671762 -33584821 + THE1A LTR MaLR 4 355 0 12073 84 2 4 chr2 219671762 219673344 -33583239 + THE1A-int LTR MaLR 1 1580 0 2565 94 3 19 chr2 219673344 219673705 -33582878 + THE1A LTR MaLR 1 355 0 1676 166 31 41 chr2 219673705 219674022 -33582561 - L1MB7 LINE L1 -68 6116 5797 6241 75 1 0 chr2 219674023 219675502 -33581081 - L1PA8A LINE L1 0 6131 4653 2318 94 0 22 chr2 219675507 219675825 -33580758 - AluY SINE Alu 0 311 1 55 16 0 0 chr2 219675862 219675924 -33580659 + AT_rich Low_complexity Low_complexity 1 62 0 13578 128 15 7 chr2 219675933 219678219 -33578364 - L1PA8A LINE L1 -1510 4636 2328 2335 102 7 0 chr2 219678219 219678522 -33578061 - AluSg SINE Alu -5 305 1 13578 128 15 7 chr2 219678522 219678552 -33578031 - L1PA8A LINE L1 -3818 2328 2300 1655 164 32 35 chr2 219678920 219679291 -33577292 + L1MA7 LINE L1 5922 6291 0 1304 270 28 45 chr2 219679534 219679960 -33576623 - MLT1E LTR MaLR -56 537 119 591 266 26 7 chr2 219679963 219680117 -33576466 - MLT1E LTR MaLR -432 161 5 231 355 46 60 chr2 219680455 219680567 -33576016 + L2 LINE L2 2494 2603 -711 1641 190 3 29 chr2 219680567 219680878 -33575705 - AluJo SINE Alu -9 303 1 231 355 46 60 chr2 219680878 219680982 -33575601 + L2 LINE L2 2603 2707 -607 227 357 21 7 chr2 219681341 219681481 -33575102 - MLT1F-int LTR MaLR -529 842 701 23 54 0 0 chr2 219681520 219681557 -33575026 + AT_rich Low_complexity Low_complexity 1 37 0 576 71 0 0 chr2 219681595 219681694 -33574889 - AluY SINE Alu 0 311 213 750 260 71 21 chr2 219681865 219682146 -33574437 - MLT1F-int LTR MaLR -770 601 307 1336 201 86 143 chr2 219682196 219682764 -33573819 - MLT1F LTR MaLR 0 542 7 21 0 0 0 chr2 219682787 219682808 -33573775 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr2 219684086 219684121 -33572462 + AT_rich Low_complexity Low_complexity 1 35 0 2445 70 3 0 chr2 219684206 219684504 -33572079 - AluY SINE Alu -12 299 1 1883 98 4 0 chr2 219685122 219685366 -33571217 + AluSq SINE Alu 1 245 -68 412 304 9 9 chr2 219687284 219687396 -33569187 - MER5A DNA MER1_type -28 161 50 277 152 0 0 chr2 219688059 219688105 -33568478 - LTR41 LTR ERVL -727 46 1 413 324 16 14 chr2 219688107 219688362 -33568221 - L2 LINE L2 -453 2861 2545 267 280 116 29 chr2 219688757 219688880 -33567703 + MER112 DNA MER1_type 8 119 -141 2342 62 0 34 chr2 219688880 219689200 -33567383 - AluY SINE Alu -1 310 2 267 280 116 29 chr2 219689200 219689283 -33567300 + MER112 DNA MER1_type 119 232 -28 21 0 0 0 chr2 219689284 219689305 -33567278 + AT_rich Low_complexity Low_complexity 1 21 0 196 306 41 101 chr2 219689952 219690243 -33566340 + L2 LINE L2 2752 3041 -231 185 310 0 0 chr2 219690251 219690309 -33566274 - L2 LINE L2 -658 2656 2599 2354 56 0 36 chr2 219691083 219691387 -33565196 - AluY SINE Alu -18 293 1 259 252 187 19 chr2 219692571 219692678 -33563905 - MIR SINE MIR -50 212 88 521 297 27 7 chr2 219692999 219693147 -33563436 + MER5B DNA MER1_type 2 152 -26 959 184 69 0 chr2 219693341 219693515 -33563068 - MER5A DNA MER1_type -2 187 2 29 0 0 0 chr2 219694323 219694352 -33562231 + AT_rich Low_complexity Low_complexity 1 29 0 481 290 133 43 chr2 219695045 219695300 -33561283 - L3 LINE CR1 -7 1570 1293 181 133 191 105 chr2 219696830 219696935 -33559648 + MIR SINE MIR 91 204 -58 351 149 0 0 chr2 219697410 219697484 -33559099 + (GGA)n Simple_repeat Simple_repeat 1 74 0 1494 184 25 92 chr2 219697869 219698270 -33558313 - MLT1A2 LTR MaLR 0 374 1 21 71 0 0 chr2 219699771 219699813 -33556770 + AT_rich Low_complexity Low_complexity 1 42 0 343 309 6 122 chr2 219700291 219700472 -33556111 + MER91A DNA MER1_type 35 194 -2 48 43 0 0 chr2 219700476 219700545 -33556038 + AT_rich Low_complexity Low_complexity 1 69 0 493 265 159 0 chr2 219700553 219700704 -33555879 - MIR SINE MIR -42 220 46 2015 126 33 0 chr2 219700708 219701041 -33555542 + MER46B DNA MER2_type 17 235 -1 846 257 57 71 chr2 219701102 219701541 -33555042 - LTR16A LTR ERVL -6 444 12 391 306 38 45 chr2 219701761 219701918 -33554665 - MIR SINE MIR -60 202 47 203 218 36 0 chr2 219703851 219703906 -33552677 + (TTATG)n Simple_repeat Simple_repeat 4 60 0 1204 140 10 5 chr2 219708956 219709156 -33547427 + L1PB1 LINE L1 5951 6151 0 180 0 0 0 chr2 219710118 219710138 -33546445 + (A)n Simple_repeat Simple_repeat 1 20 0 343 277 78 7 chr2 219712803 219712944 -33543639 + L2 LINE L2 3163 3313 0 743 274 39 87 chr2 219714171 219714615 -33541968 - L1ME4a LINE L1 -19 6102 5695 2485 57 0 0 chr2 219714615 219714912 -33541671 - AluY SINE Alu -14 297 1 743 274 39 87 chr2 219714912 219715102 -33541481 - L1ME4a LINE L1 -426 5695 5498 1813 84 0 0 chr2 219715521 219715748 -33540835 + AluY SINE Alu 1 227 -84 275 330 107 95 chr2 219716441 219717135 -33539448 - L2 LINE L2 -22 3250 2498 23 0 0 0 chr2 219717700 219717723 -33538860 + AT_rich Low_complexity Low_complexity 1 23 0 2234 85 20 0 chr2 219718145 219718491 -33538092 - AluSc SINE Alu 0 352 1 202 328 0 0 chr2 219719446 219719507 -33537076 - L2 LINE L2 -5 3267 3207 963 350 64 42 chr2 219719554 219720214 -33536369 - L3 LINE CR1 -11 1566 893 207 162 0 0 chr2 219720411 219720448 -33536135 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 457 321 253 13 chr2 219720505 219720979 -33535604 - L3 LINE CR1 -877 700 113 966 133 0 17 chr2 219721211 219721392 -33535191 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 1739 181 0 40 chr2 219721420 219721741 -33534842 - AluJo SINE Alu -1 311 4 1194 249 19 28 chr2 219721776 219722138 -33534445 + MLT1A2 LTR MaLR 1 359 -15 414 196 15 23 chr2 219722739 219722872 -33533711 + CT-rich Low_complexity Low_complexity 2 133 0 251 311 44 11 chr2 219724106 219724196 -33532387 + MIR SINE MIR 157 249 -13 307 240 78 39 chr2 219725282 219725461 -33531122 - L1MC5 LINE L1 -35 7926 7741 434 274 198 10 chr2 219726673 219726870 -33529713 + MIR SINE MIR 29 262 0 221 268 0 0 chr2 219728357 219728413 -33528170 - L2 LINE L2 0 3313 3258 238 297 34 34 chr2 219728891 219729009 -33527574 + L3 LINE CR1 1356 1473 -104 212 167 0 24 chr2 219729221 219729263 -33527320 + (TGG)n Simple_repeat Simple_repeat 2 42 0 234 275 18 9 chr2 219729746 219729855 -33526728 + (TA)n Simple_repeat Simple_repeat 1 110 0 185 153 0 34 chr2 219729858 219729917 -33526666 + (CATATA)n Simple_repeat Simple_repeat 6 62 0 437 226 47 0 chr2 219730781 219730887 -33525696 + MER94 DNA DNA 3 113 -21 823 126 0 8 chr2 219731181 219731308 -33525275 - L1M2 LINE L1 -483 5808 5683 6518 85 14 10 chr2 219731323 219732336 -33524247 + L1PA10 LINE L1 5170 6183 0 589 290 126 36 chr2 219732553 219733588 -33522995 - L1ME3A LINE L1 -218 5935 4800 348 64 0 0 chr2 219733590 219733637 -33522946 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2079 128 0 7 chr2 219733642 219733931 -33522652 - AluSx SINE Alu -25 287 1 291 316 15 15 chr2 219733996 219734129 -33522454 - L1ME3A LINE L1 -1452 4677 4545 753 275 135 7 chr2 219734165 219734735 -33521848 - L1ME3A LINE L1 -2696 3433 2791 687 316 60 27 chr2 219734747 219735267 -33521316 - L1ME3A LINE L1 -3387 2742 2196 1829 154 47 0 chr2 219735267 219735565 -33521018 + AluSx SINE Alu 1 312 0 687 316 60 27 chr2 219735565 219735673 -33520910 - L1ME3A LINE L1 -3933 2196 2093 15396 118 11 11 chr2 219735898 219739108 -33517475 - L1PA8A LINE L1 0 6446 3235 9382 155 10 32 chr2 219739112 219742116 -33514467 - L1PA8A LINE L1 -3444 3017 23 2264 47 68 0 chr2 219742162 219742441 -33514142 + AluY SINE Alu 1 298 -13 246 250 96 10 chr2 219742699 219742803 -33513780 - L1M2 LINE L1 -4318 2531 2419 640 216 91 118 chr2 219742966 219743196 -33513387 - L1ME3A LINE L1 -4917 1202 967 688 224 180 0 chr2 219743196 219743332 -33513251 + MER20 DNA MER1_type 4 114 -105 396 0 0 0 chr2 219743332 219743376 -33513207 + (CA)n Simple_repeat Simple_repeat 1 44 0 297 0 0 0 chr2 219743375 219743408 -33513175 + (GA)n Simple_repeat Simple_repeat 2 34 0 * 688 224 180 0 chr2 219743376 219743454 -33513129 + MER20 DNA MER1_type 114 219 0 640 216 91 118 chr2 219743454 219743746 -33512837 - L1ME3A LINE L1 -5152 967 695 1160 113 0 0 chr2 219743746 219743923 -33512660 - L1MA4 LINE L1 -6 6294 6118 640 216 91 118 chr2 219743923 219743992 -33512591 - L1ME3A LINE L1 -5424 695 626 624 275 12 25 chr2 219743995 219744155 -33512428 + MER5A DNA MER1_type 26 183 -6 301 279 125 107 chr2 219744158 219744477 -33512106 - L1ME3A LINE L1 -5472 647 323 383 147 40 0 chr2 219745609 219745684 -33510899 + MER116 DNA Mariner 3 80 0 242 333 79 75 chr2 219747624 219747876 -33508707 - L2 LINE L2 -182 3090 2838 1441 123 52 5 chr2 219748851 219749062 -33507521 - AluSg/x SINE Alu -19 293 73 673 289 24 52 chr2 219749899 219750148 -33506435 - MIR SINE MIR -13 249 8 216 97 0 0 chr2 219750812 219750843 -33505740 + (TG)n Simple_repeat Simple_repeat 1 31 0 854 180 12 29 chr2 219752715 219752887 -33503696 - L1PB3 LINE L1 0 6154 5986 202 276 0 17 chr2 219752949 219753007 -33503576 + L2 LINE L2 3164 3220 -93 190 314 198 12 chr2 219753001 219753087 -33503496 + MIR SINE MIR 20 121 -141 * 234 0 0 0 chr2 219758467 219758493 -33498090 + (CA)n Simple_repeat Simple_repeat 1 26 0 2365 86 3 0 chr2 219758803 219759106 -33497477 - AluY SINE Alu -7 304 1 1763 148 24 51 chr2 219760062 219760268 -33496315 - L1MB1 LINE L1 0 6168 5975 2398 92 0 10 chr2 219760268 219760574 -33496009 - AluY SINE Alu -8 303 1 1763 148 24 51 chr2 219760574 219760738 -33495845 - L1MB1 LINE L1 -193 5975 5808 571 104 31 21 chr2 219761317 219761408 -33495175 + L1PA10 LINE L1 4915 5007 -1135 3730 78 6 0 chr2 219761408 219761907 -33494676 + L1PA10 LINE L1 5662 6163 -5 183 314 100 50 chr2 219762162 219762302 -33494281 - L2 LINE L2 -160 3112 2966 2118 110 7 29 chr2 219762596 219762904 -33493679 - AluSq SINE Alu -12 301 1 41 77 0 23 chr2 219762962 219763092 -33493491 + AT_rich Low_complexity Low_complexity 1 127 0 850 147 7 15 chr2 219763139 219763275 -33493308 + AluJo SINE Alu 3 137 -175 21 36 0 0 chr2 219763275 219763303 -33493280 + AT_rich Low_complexity Low_complexity 1 28 0 277 390 22 0 chr2 219763493 219763629 -33492954 + L2 LINE L2 2897 3035 -237 1861 203 51 70 chr2 219763629 219763880 -33492703 - MLT1D LTR MaLR -2 503 266 2200 90 10 10 chr2 219763880 219764180 -33492403 - AluSp SINE Alu -13 300 1 1861 203 51 70 chr2 219764180 219764441 -33492142 - MLT1D LTR MaLR -239 266 1 366 195 11 11 chr2 219765329 219765416 -33491167 - HsTC2 DNA Tc2 -35 1863 1777 1354 97 0 0 chr2 219765452 219765637 -33490946 - AluSx SINE Alu -7 305 121 2951 55 5 3 chr2 219766333 219766717 -33489866 - L1PA7 LINE L1 0 6154 5770 820 115 107 0 chr2 219766717 219766839 -33489744 - AluSx SINE Alu -177 135 1 1208 256 75 87 chr2 219766846 219767470 -33489113 - HsTC2 DNA Tc2 -127 1771 1 470 286 80 11 chr2 219767472 219767647 -33488936 + MIR SINE MIR 76 262 0 249 281 265 40 chr2 219768827 219769151 -33487432 - L2 LINE L2 -459 2855 2459 574 217 153 19 chr2 219771378 219771535 -33485048 - MER5A DNA MER1_type -8 181 4 1050 251 44 6 chr2 219774020 219774335 -33482248 - L1ME3A LINE L1 -5 6165 5839 333 213 92 117 chr2 219774310 219774592 -33481991 - L1ME3A LINE L1 -1422 4724 4450 * 1180 270 63 31 chr2 219774622 219775293 -33481290 - L1ME3A LINE L1 -2556 3590 2899 4347 77 25 7 chr2 219775326 219775938 -33480645 - L1MA1 LINE L1 0 6302 5680 1483 178 4 0 chr2 219776068 219776332 -33480251 + L1MC1 LINE L1 6063 6327 -6 360 0 0 0 chr2 219776970 219777015 -33479568 + (TG)n Simple_repeat Simple_repeat 1 45 -2771 15095 128 14 17 chr2 219777015 219778486 -33478097 + Tigger1 DNA MER2_type 1 1461 -957 2429 64 0 10 chr2 219778486 219778784 -33477799 + AluY SINE Alu 1 295 -16 15095 128 14 17 chr2 219778784 219779739 -33476844 + Tigger1 DNA MER2_type 1461 2418 0 360 0 0 0 chr2 219779739 219779746 -33476837 + (TG)n Simple_repeat Simple_repeat 44 2816 0 360 0 0 0 chr2 219779746 219779786 -33476797 + (TG)n Simple_repeat Simple_repeat 2 41 0 1732 165 54 27 chr2 219779787 219780121 -33476462 + MER2 DNA MER2_type 1 343 -1 288 0 0 0 chr2 219780162 219780194 -33476389 + (TG)n Simple_repeat Simple_repeat 1 32 0 784 48 14 62 chr2 219780224 219780513 -33476070 + (TA)n Simple_repeat Simple_repeat 1 275 0 1024 153 6 12 chr2 219780534 219780697 -33475886 - MLT1E LTR MaLR 0 593 432 1948 175 168 23 chr2 219782073 219782514 -33474069 + MLT1D LTR MaLR 1 505 0 229 182 0 0 chr2 219783103 219783158 -33473425 - L1ME4a LINE L1 -5 6116 6062 227 224 20 0 chr2 219783578 219783627 -33472956 + (TATATG)n Simple_repeat Simple_repeat 4 53 0 206 367 61 10 chr2 219783827 219783925 -33472658 + L2 LINE L2 2973 3075 -197 231 333 93 70 chr2 219784056 219784441 -33472142 - L2 LINE L2 -1 3312 2919 189 0 0 0 chr2 219787491 219787512 -33469071 + (T)n Simple_repeat Simple_repeat 1 21 0 963 123 95 17 chr2 219787813 219787992 -33468591 - THE1C LTR MaLR 0 375 183 31 0 0 0 chr2 219787995 219788026 -33468557 + AT_rich Low_complexity Low_complexity 1 31 0 339 333 29 7 chr2 219789066 219789204 -33467379 + MIR3 SINE MIR 30 170 -38 22 0 0 0 chr2 219789205 219789227 -33467356 + AT_rich Low_complexity Low_complexity 1 22 0 681 304 19 10 chr2 219789803 219790010 -33466573 + MIR SINE MIR 26 234 -28 278 183 0 0 chr2 219791199 219791248 -33465335 - MIR SINE MIR -102 106 58 297 0 0 0 chr2 219791491 219791524 -33465059 + (TG)n Simple_repeat Simple_repeat 2 34 0 438 263 27 32 chr2 219791609 219791838 -33464745 - L1MC4a LINE L1 -302 6317 6159 223 350 16 32 chr2 219791856 219791979 -33464604 - L2 LINE L2 -167 3105 2985 2208 52 4 7 chr2 219792003 219792272 -33464311 + AluY SINE Alu 40 307 -4 1698 131 22 0 chr2 219792576 219792850 -33463733 + L1MA4A LINE L1 6007 6286 -17 31 58 0 0 chr2 219792852 219792904 -33463679 + AT_rich Low_complexity Low_complexity 1 52 0 257 328 144 28 chr2 219792910 219793306 -33463277 - L2 LINE L2 -1005 2309 1868 357 277 58 29 chr2 219793519 219793656 -33462927 - MIR3 SINE MIR -65 143 3 375 281 5 112 chr2 219793710 219793906 -33462677 - MIR SINE MIR -50 212 38 227 221 41 110 chr2 219794960 219795105 -33461478 - HAL1b LINE L1 -27 1321 1187 220 263 70 0 chr2 219795135 219795192 -33461391 - MIR3 SINE MIR -40 168 108 1324 126 0 0 chr2 219796844 219797026 -33459557 + AluSq SINE Alu 117 298 -15 2333 102 0 0 chr2 219797666 219797969 -33458614 - AluSx SINE Alu -9 303 1 491 185 170 22 chr2 219799491 219799626 -33456957 + MER5B DNA MER1_type 2 156 -22 2126 174 37 118 chr2 219799644 219799948 -33456635 - L1MC4a LINE L1 -683 5993 5666 285 57 0 0 chr2 219799948 219799983 -33456600 - U2 snRNA snRNA -152 36 2 2126 174 37 118 chr2 219799983 219800447 -33456136 - L1MC4a LINE L1 -1010 5666 5257 780 263 57 18 chr2 219800448 219800783 -33455800 - L1MC4a LINE L1 -3689 2955 2608 25 95 0 0 chr2 219800818 219800892 -33455691 + AT_rich Low_complexity Low_complexity 1 74 0 4321 242 30 33 chr2 219800892 219802080 -33454503 - L1MC4a LINE L1 -5342 1200 16 741 128 0 0 chr2 219802148 219802250 -33454333 - LTR12 LTR ERV1 0 714 613 330 253 11 0 chr2 219802250 219802341 -33454242 - LTR30 LTR ERV1 -79 643 552 1452 111 21 145 chr2 219802341 219802666 -33453917 - LTR12 LTR ERV1 -429 285 1 21 0 0 0 chr2 219802892 219802913 -33453670 + AT_rich Low_complexity Low_complexity 1 21 0 1784 175 3 0 chr2 219803336 219803621 -33452962 + AluJo SINE Alu 1 286 -26 630 269 119 27 chr2 219804299 219804783 -33451800 + L1MC/D LINE L1 5271 5813 -351 2343 106 0 0 chr2 219804897 219805198 -33451385 + AluSx SINE Alu 3 303 -9 2772 92 17 2 chr2 219805386 219805799 -33450784 - L1MA5 LINE L1 -6 6294 5876 22 35 0 0 chr2 219805891 219805920 -33450663 + AT_rich Low_complexity Low_complexity 1 29 0 477 0 0 0 chr2 219808206 219808259 -33448324 + (CA)n Simple_repeat Simple_repeat 2 54 0 288 269 46 0 chr2 219809648 219809756 -33446827 + Charlie2a DNA MER1_type 314 426 -2436 977 203 69 7 chr2 219809775 219810051 -33446532 + Charlie2a DNA MER1_type 728 1020 -1842 360 207 9 72 chr2 219810039 219810129 -33446454 + Charlie2a DNA MER1_type 2752 2835 -27 * 425 117 36 81 chr2 219810129 219810240 -33446343 + L1PA13 LINE L1 6055 6160 -3 360 207 9 72 chr2 219810240 219810260 -33446323 + Charlie2a DNA MER1_type 2835 2855 -7 21 0 0 0 chr2 219810878 219810899 -33445684 + AT_rich Low_complexity Low_complexity 1 21 0 560 321 48 44 chr2 219811438 219811687 -33444896 + MIR SINE MIR 1 250 -12 417 270 108 14 chr2 219812008 219812156 -33444427 + MIR SINE MIR 45 206 -56 972 113 15 0 chr2 219812181 219812314 -33444269 + AluSq/x SINE Alu 1 135 -177 24 31 0 77 chr2 219812359 219812424 -33444159 + AT_rich Low_complexity Low_complexity 1 60 0 187 352 57 0 chr2 219813077 219813165 -33443418 + MIR SINE MIR 35 127 -135 249 196 0 0 chr2 219813459 219813510 -33443073 + (TATG)n Simple_repeat Simple_repeat 3 53 0 398 329 13 32 chr2 219813889 219814047 -33442536 + MIR SINE MIR 60 214 -48 289 346 37 9 chr2 219814868 219814975 -33441608 + MIR3 SINE MIR 6 115 -93 336 24 0 0 chr2 219815512 219815553 -33441030 + (TC)n Simple_repeat Simple_repeat 2 42 0 243 0 0 0 chr2 219815552 219815579 -33441004 + (TG)n Simple_repeat Simple_repeat 2 28 0 * 1096 23 0 0 chr2 219816560 219816692 -33439891 - L1PA4 LINE L1 -3 6152 6021 866 194 61 11 chr2 219816751 219816931 -33439652 - MER5A DNA MER1_type 0 189 1 794 143 104 70 chr2 219817015 219817245 -33439338 + L1ME2 LINE L1 5919 6156 -8 2091 132 0 10 chr2 219817373 219817684 -33438899 + AluSx SINE Alu 1 308 -4 806 149 5 154 chr2 219818558 219818633 -33437950 + MER5A DNA MER1_type 1 31 -158 775 185 0 0 chr2 219818633 219818763 -33437820 + FLAM_C SINE Alu 1 130 -3 806 149 5 154 chr2 219818763 219818882 -33437701 + MER5A DNA MER1_type 31 166 -23 336 172 0 0 chr2 219818889 219818947 -33437636 + MER1B DNA MER1_type 1 58 -279 1380 86 25 15 chr2 219818955 219819153 -33437430 + MER1B DNA MER1_type 140 339 0 249 264 83 8 chr2 219819554 219819675 -33436908 - L1ME4a LINE L1 0 6121 5992 252 0 0 0 chr2 219819697 219819725 -33436858 + (CA)n Simple_repeat Simple_repeat 2 29 0 403 319 51 40 chr2 219819735 219820130 -33436453 - L1ME4a LINE L1 -213 5908 5510 2935 157 37 7 chr2 219820368 219820909 -33435674 - MER89 LTR ERV1 0 559 3 269 245 74 68 chr2 219821127 219821290 -33435293 + L2 LINE L2 3079 3242 -71 185 314 43 0 chr2 219821351 219821421 -33435162 + L2 LINE L2 3200 3272 0 185 224 17 0 chr2 219822080 219822138 -33434445 + (TA)n Simple_repeat Simple_repeat 2 60 0 1930 160 3 31 chr2 219822920 219823239 -33433344 + AluJo SINE Alu 1 310 -2 1925 253 107 26 chr2 219824577 219825381 -33431202 - L1ME3A LINE L1 -9 6144 5276 900 256 24 94 chr2 219825386 219826016 -33430567 - L1ME3A LINE L1 -1892 4237 3652 2381 95 0 7 chr2 219826314 219826619 -33429964 - AluSq SINE Alu -10 303 1 1732 162 10 20 chr2 219826673 219826969 -33429614 - AluJb SINE Alu -16 296 4 312 303 29 29 chr2 219827085 219827399 -33429184 - L1ME3A LINE L1 -2716 3413 3100 2309 91 10 3 chr2 219827403 219827699 -33428884 - AluSp SINE Alu -15 298 1 22 35 0 0 chr2 219827701 219827730 -33428853 + AT_rich Low_complexity Low_complexity 1 29 0 1850 157 13 31 chr2 219827732 219828050 -33428533 + AluJb SINE Alu 1 312 0 598 262 86 58 chr2 219828052 219828131 -33428452 - L1MEd LINE L1 -4839 1471 1396 2226 121 0 3 chr2 219828131 219828438 -33428145 - AluSg SINE Alu -4 306 1 598 262 86 58 chr2 219828438 219828991 -33427592 - L1MEd LINE L1 -4914 1396 791 2081 124 16 13 chr2 219829977 219830284 -33426299 + AluSx SINE Alu 1 308 -4 423 0 0 0 chr2 219832534 219832581 -33424002 + (TA)n Simple_repeat Simple_repeat 2 48 0 189 0 0 0 chr2 219832580 219832601 -33423982 + (CA)n Simple_repeat Simple_repeat 2 22 0 * 2002 129 7 0 chr2 219832605 219832885 -33423698 - AluSx SINE Alu -30 282 1 1442 213 18 46 chr2 219833145 219833417 -33423166 - MLT1E2 LTR MaLR -113 513 254 573 0 0 48 chr2 219833417 219833500 -33423083 - L1PA2 LINE L1 0 6155 6077 1442 213 18 46 chr2 219833500 219833616 -33422967 - MLT1E2 LTR MaLR -372 254 136 203 191 24 0 chr2 219834439 219834481 -33422102 + (TTG)n Simple_repeat Simple_repeat 2 44 0 23 54 0 0 chr2 219835341 219835378 -33421205 + AT_rich Low_complexity Low_complexity 1 37 0 213 39 0 0 chr2 219837903 219837929 -33418654 + (TG)n Simple_repeat Simple_repeat 1 26 0 * 231 36 0 0 chr2 219837928 219837956 -33418627 + (GA)n Simple_repeat Simple_repeat 1 28 0 185 364 173 9 chr2 219838161 219838271 -33418312 - L2 LINE L2 -43 3229 3102 3585 143 36 20 chr2 219838603 219839246 -33417337 - MER39B LTR ERV1 0 653 1 379 176 0 19 chr2 219840039 219840147 -33416436 + CT-rich Low_complexity Low_complexity 1 106 0 467 327 109 28 chr2 219840595 219840843 -33415740 + L3 LINE CR1 1198 1465 -112 201 292 0 0 chr2 219840889 219840937 -33415646 + MER5B DNA MER1_type 3 50 -128 1212 218 85 65 chr2 219840992 219841348 -33415235 + L1MC5 LINE L1 7108 7455 -506 2448 61 3 3 chr2 219841348 219841644 -33414939 + AluSc SINE Alu 1 296 -13 1212 218 85 65 chr2 219841644 219841984 -33414599 + L1MC5 LINE L1 7455 7818 -143 1300 144 0 5 chr2 219841995 219842183 -33414400 + AluJo SINE Alu 1 187 -125 475 116 0 0 chr2 219842306 219842375 -33414208 - AluSg SINE Alu -11 299 231 1448 80 0 11 chr2 219842375 219842562 -33414021 - AluSg SINE Alu -125 185 1 186 286 0 0 chr2 219842691 219842733 -33413850 + L3 LINE CR1 1532 1573 -4 241 267 0 27 chr2 219843894 219843969 -33412614 + (TATATG)n Simple_repeat Simple_repeat 2 74 0 25 31 0 0 chr2 219844245 219844277 -33412306 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr2 219848266 219848294 -33408289 + AT_rich Low_complexity Low_complexity 1 28 0 198 103 0 0 chr2 219850180 219850209 -33406374 + (TAGA)n Simple_repeat Simple_repeat 1 29 0 737 223 103 47 chr2 219851412 219851645 -33404938 - MIR SINE MIR -11 251 6 200 35 35 0 chr2 219851759 219851788 -33404795 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 511 237 67 7 chr2 219853605 219853740 -33402843 - MIR SINE MIR -15 247 105 2178 108 0 0 chr2 219855808 219856095 -33400488 + AluSx SINE Alu 1 287 -25 2118 107 4 0 chr2 219858138 219858419 -33398164 + AluSx SINE Alu 2 323 0 206 50 25 25 chr2 219858419 219858459 -33398124 + (CAAAA)n Simple_repeat Simple_repeat 2 180 0 488 225 93 8 chr2 219859586 219859715 -33396868 + MIR3 SINE MIR 66 205 -3 24 67 0 0 chr2 219860464 219860509 -33396074 + AT_rich Low_complexity Low_complexity 1 45 0 192 333 100 11 chr2 219860875 219860965 -33395618 - L2 LINE L2 -8 3305 3208 198 143 0 0 chr2 219861628 219861663 -33394920 + (T)n Simple_repeat Simple_repeat 1 35 0 21 36 0 0 chr2 219864511 219864539 -33392044 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 219864709 219864733 -33391850 + AT_rich Low_complexity Low_complexity 1 24 0 1885 147 0 39 chr2 219865874 219866181 -33390402 + AluSx SINE Alu 3 297 -15 22 35 0 0 chr2 219866337 219866366 -33390217 + AT_rich Low_complexity Low_complexity 1 29 0 717 132 0 0 chr2 219869186 219869292 -33387291 + FLAM_A SINE Alu 17 122 -20 21 71 0 0 chr2 219869297 219869339 -33387244 + AT_rich Low_complexity Low_complexity 1 42 0 1037 143 70 83 chr2 219871389 219871619 -33384964 + MER46A DNA MER2_type 1 227 -9 223 281 22 0 chr2 219871712 219871801 -33384782 + T-rich Low_complexity Low_complexity 6 96 0 259 363 88 25 chr2 219871873 219872077 -33384506 - MIR SINE MIR -11 251 35 23 33 0 0 chr2 219872834 219872864 -33383719 + AT_rich Low_complexity Low_complexity 1 30 0 222 118 0 0 chr2 219873723 219873757 -33382826 + (TG)n Simple_repeat Simple_repeat 2 35 0 6208 109 72 38 chr2 219876484 219877969 -33378614 - pTR5 LTR ERV1 0 2438 739 3150 157 73 16 chr2 219878185 219878803 -33377780 - MER39B LTR ERV1 0 653 1 544 211 211 0 chr2 219878860 219879031 -33377552 - MIR SINE MIR 0 262 56 500 193 59 17 chr2 219879881 219880000 -33376583 - MIR3 SINE MIR -24 184 61 749 223 55 10 chr2 219880032 219880234 -33376349 + MIR SINE MIR 47 257 -5 206 228 76 38 chr2 219880383 219880462 -33376121 - MIR SINE MIR -69 139 58 22 0 0 0 chr2 219880553 219880575 -33376008 + AT_rich Low_complexity Low_complexity 1 22 0 506 245 128 20 chr2 219881138 219881334 -33375249 - MIR SINE MIR -1 261 45 281 358 89 0 chr2 219881482 219881605 -33374978 + L2 LINE L2 3139 3272 0 259 295 39 47 chr2 219881834 219881963 -33374620 - MIR SINE MIR -74 188 61 556 253 45 60 chr2 219882400 219882665 -33373918 + MER102a DNA MER1_type 70 330 0 963 183 115 10 chr2 219883862 219884070 -33372513 + MIR SINE MIR 8 237 -25 320 257 128 9 chr2 219884633 219884742 -33371841 - MLT1J2 LTR MaLR -10 440 319 2257 114 3 0 chr2 219885127 219885433 -33371150 - AluSg SINE Alu -3 307 1 2198 123 3 0 chr2 219885528 219885836 -33370747 - AluSx SINE Alu -3 309 1 429 270 208 0 chr2 219885842 219886020 -33370563 + MIR SINE MIR 48 262 0 281 248 76 9 chr2 219886125 219886230 -33370353 + MIR SINE MIR 24 135 -73 472 315 241 8 chr2 219886645 219887039 -33369544 + L2 LINE L2 2824 3309 -4 822 132 7 29 chr2 219887267 219887403 -33369180 - FLAM_C SINE Alu 0 133 1 689 201 91 70 chr2 219887491 219887551 -33369032 - MER3 DNA MER1_type 0 209 152 1482 151 0 0 chr2 219887551 219887770 -33368813 + AluSg/x SINE Alu 74 292 -18 689 201 91 70 chr2 219887770 219887908 -33368675 - MER3 DNA MER1_type -57 152 7 189 0 0 0 chr2 219888505 219888526 -33368057 + (TTG)n Simple_repeat Simple_repeat 1 21 0 1378 193 28 55 chr2 219888532 219888822 -33367761 - AluJo SINE Alu -30 282 1 3308 226 179 33 chr2 219889033 219890153 -33366430 + Charlie1a DNA MER1_type 1 1320 -1441 1370 167 49 21 chr2 219890153 219890441 -33366142 - AluJo SINE Alu -13 299 4 3308 226 179 33 chr2 219890441 219890558 -33366025 + Charlie1a DNA MER1_type 1320 1419 -36 518 139 0 0 chr2 219890558 219890637 -33365946 - AluJ/FLAM SINE Alu -233 79 1 2470 53 10 3 chr2 219890925 219891229 -33365354 - AluY SINE Alu -5 306 1 679 185 15 15 chr2 219891351 219891481 -33365102 + FLAM_C SINE Alu 1 130 -3 410 217 32 129 chr2 219891900 219892117 -33364466 + L2 LINE L2 2366 2561 -753 306 236 125 49 chr2 219892299 219892443 -33364140 + L2 LINE L2 3159 3313 0 441 160 27 0 chr2 219893023 219893098 -33363485 - AluJ/FRAM SINE Alu -16 296 220 1658 193 3 7 chr2 219893688 219893983 -33362600 - AluJo SINE Alu -16 296 3 180 0 0 0 chr2 219894246 219894266 -33362317 + (CCCCCA)n Simple_repeat Simple_repeat 5 24 0 2251 113 7 0 chr2 219894575 219894885 -33361698 - AluSx SINE Alu 0 312 1 831 73 89 0 chr2 219895542 219895666 -33360917 + MER85 DNA T2_type 5 139 0 351 283 94 58 chr2 219897336 219897527 -33359056 + MIR SINE MIR 49 246 -16 204 248 87 101 chr2 219897571 219897720 -33358863 - MIR SINE MIR -50 212 66 180 0 0 0 chr2 219899145 219899165 -33357418 + (CAA)n Simple_repeat Simple_repeat 2 21 0 227 56 56 0 chr2 219899441 219899477 -33357106 + (TATG)n Simple_repeat Simple_repeat 1 38 0 2334 76 0 3 chr2 219902115 219902406 -33354177 + AluSg1 SINE Alu 1 290 -19 21 0 0 0 chr2 219902536 219902557 -33354026 + AT_rich Low_complexity Low_complexity 1 21 0 651 86 38 48 chr2 219902568 219902673 -33353910 - FRAM SINE Alu -26 150 47 791 208 177 19 chr2 219903205 219903470 -33353113 + MER46C DNA MER2_type 5 311 -27 2476 68 0 3 chr2 219903603 219903911 -33352672 - AluY SINE Alu -4 307 1 388 254 57 49 chr2 219904458 219904580 -33352003 + MER63 DNA MER1_type 1 749 -87 268 219 151 0 chr2 219904583 219904656 -33351927 + MER63 DNA MER1_type 977 1060 0 198 0 0 0 chr2 219905244 219905266 -33351317 + (T)n Simple_repeat Simple_repeat 1 22 0 206 32 32 0 chr2 219906291 219906322 -33350261 + (CAAA)n Simple_repeat Simple_repeat 3 34 0 622 236 113 37 chr2 219906984 219907366 -33349217 - HAL1 LINE L1 -1206 1301 891 24 53 0 0 chr2 219908192 219908230 -33348353 + AT_rich Low_complexity Low_complexity 1 38 0 459 237 90 40 chr2 219908757 219908934 -33347649 + MIR SINE MIR 76 261 -1 2441 30 0 30 chr2 219910378 219910678 -33345905 - AluY SINE Alu -20 291 1 21 0 0 0 chr2 219910686 219910707 -33345876 + AT_rich Low_complexity Low_complexity 1 21 0 206 288 15 30 chr2 219910939 219911005 -33345578 - L2 LINE L2 -1 3271 3207 1157 203 222 11 chr2 219911689 219912148 -33344435 - L1MC4 LINE L1 -14 8028 7473 2027 142 3 0 chr2 219912316 219912619 -33343964 - AluSx SINE Alu -8 304 1 564 220 163 7 chr2 219912713 219912854 -33343729 + MER5A DNA MER1_type 26 188 -1 2106 144 0 0 chr2 219913031 219913322 -33343261 - AluJo SINE Alu -21 291 1 219 240 219 41 chr2 219913322 219913468 -33343115 + L2 LINE L2 3123 3294 -19 1996 150 3 0 chr2 219913602 219913896 -33342687 - AluJb SINE Alu -17 295 1 768 225 62 55 chr2 219914394 219914798 -33341785 - L1MC5 LINE L1 -30 7931 7525 319 273 153 4 chr2 219914851 219915093 -33341490 - L1ME4a LINE L1 -225 5965 5688 438 256 222 24 chr2 219915596 219915803 -33340780 + MIR SINE MIR 15 262 0 300 223 39 39 chr2 219916031 219916134 -33340449 - L1ME4a LINE L1 -1541 4674 4572 26 0 0 0 chr2 219916300 219916326 -33340257 + AT_rich Low_complexity Low_complexity 1 26 0 313 283 117 31 chr2 219916889 219917112 -33339471 - L1M4 LINE L1 -1500 4646 4405 1710 182 13 19 chr2 219918267 219918574 -33338009 - AluJo SINE Alu -3 309 5 494 291 112 29 chr2 219919324 219919565 -33337018 + MIR SINE MIR 2 262 0 1675 153 0 15 chr2 219919967 219920255 -33336328 + AluJo SINE Alu 25 308 0 387 272 85 70 chr2 219920984 219921606 -33334977 - L1ME4a LINE L1 -1617 4598 3923 2207 109 10 3 chr2 219921606 219921910 -33334673 - AluSx SINE Alu -6 306 1 387 272 85 70 chr2 219921910 219921944 -33334639 - L1ME4a LINE L1 -2292 3923 3891 401 254 0 0 chr2 219921948 219922070 -33334513 - L1ME4a LINE L1 -2886 3329 3208 570 276 146 35 chr2 219922135 219922732 -33333851 - L1ME4a LINE L1 -4308 2088 1426 1613 170 112 6 chr2 219922752 219923082 -33333501 - MLT1A1 LTR MaLR 0 365 1 2212 194 56 32 chr2 219923092 219923624 -33332959 - MLT1A1-int LTR MaLR -11 1724 1180 2890 218 13 68 chr2 219923665 219924446 -33332137 - MLT1A1-int LTR MaLR -793 942 205 262 267 27 20 chr2 219925128 219925274 -33331309 - L1ME4a LINE L1 -4995 1210 1064 207 259 0 0 chr2 219925389 219925447 -33331136 + (TA)n Simple_repeat Simple_repeat 2 59 0 308 304 69 78 chr2 219925518 219925965 -33330618 - L1ME4a LINE L1 -5359 846 404 538 161 0 0 chr2 219926361 219926448 -33330135 + FLAM_A SINE Alu 40 126 -16 597 313 35 17 chr2 219926700 219927045 -33329538 + L1MEc LINE L1 116 466 -5930 917 211 56 3 chr2 219927076 219927361 -33329222 + L1MEc LINE L1 2154 2453 -3943 1303 157 15 54 chr2 219927417 219927678 -33328905 + AluJo SINE Alu 4 254 -58 529 135 0 0 chr2 219927678 219927752 -33328831 - AluJ SINE Alu -106 206 133 533 161 188 0 chr2 219927752 219927864 -33328719 - AluJ SINE Alu -169 133 1 21 0 0 0 chr2 219928308 219928329 -33328254 + AT_rich Low_complexity Low_complexity 1 21 0 257 200 94 0 chr2 219928354 219928439 -33328144 - L1M4 LINE L1 -1871 4275 4183 406 263 55 66 chr2 219928451 219928740 -33327843 - HAL1 LINE L1 -937 1570 1285 308 279 81 52 chr2 219928747 219928830 -33327753 - HAL1 LINE L1 -1364 1143 1053 1677 195 6 13 chr2 219928830 219929143 -33327440 - AluJb SINE Alu -1 311 1 308 279 81 52 chr2 219929143 219929195 -33327388 - HAL1 LINE L1 -1454 1053 1004 719 297 103 29 chr2 219929324 219929634 -33326949 + L2 LINE L2 2959 3291 -22 183 156 0 0 chr2 219929654 219929686 -33326897 + GA-rich Low_complexity Low_complexity 4 35 0 1938 164 7 0 chr2 219930155 219930459 -33326124 + AluSq SINE Alu 1 306 -7 1265 219 16 58 chr2 219930688 219930875 -33325708 + L1MC/D LINE L1 5255 5448 -2360 2433 72 0 20 chr2 219930875 219931181 -33325402 + AluY SINE Alu 1 300 -11 1265 219 16 58 chr2 219931181 219931427 -33325156 + L1MC/D LINE L1 5448 5670 -2138 555 169 236 0 chr2 219931438 219931586 -33324997 + L1 LINE L1 3987 4169 -1977 244 103 103 0 chr2 219931593 219931651 -33324932 + GA-rich Low_complexity Low_complexity 2 65 0 340 246 78 22 chr2 219931654 219931833 -33324750 + L1 LINE L1 4148 4336 -1810 2489 84 65 8 chr2 219931840 219932195 -33324388 + THE1C LTR MaLR 1 375 0 4600 120 47 77 chr2 219932195 219933097 -33323486 + THE1C-int LTR MaLR 1 875 -705 187 377 15 8 chr2 219933113 219933243 -33323340 + L2 LINE L2 2625 2755 -559 185 191 38 152 chr2 219933289 219933332 -33323251 - MIR SINE MIR -11 251 225 2080 132 7 0 chr2 219933332 219933619 -33322964 - AluSx SINE Alu -23 289 1 185 191 38 152 chr2 219933619 219933680 -33322903 - MIR SINE MIR -37 225 159 321 254 17 62 chr2 219933780 219933957 -33322626 + MLT1H LTR MaLR 21 189 -360 1988 146 0 3 chr2 219933960 219934254 -33322329 + AluSx SINE Alu 1 293 -19 1724 77 0 0 chr2 219934260 219934469 -33322114 + AluY SINE Alu 1 209 -102 7124 90 2 32 chr2 219934469 219935392 -33321191 + MER11C LTR ERVK 1 888 -183 2516 56 0 13 chr2 219935392 219935696 -33320887 + AluY SINE Alu 1 300 -11 7124 90 2 32 chr2 219935696 219935862 -33320721 + MER11C LTR ERVK 888 1057 -14 745 82 0 0 chr2 219935899 219935997 -33320586 + AluY SINE Alu 203 300 -11 236 247 148 0 chr2 219936231 219936312 -33320271 - MIR SINE MIR -122 140 48 1967 104 0 4 chr2 219936632 219936883 -33319700 - AluSx SINE Alu -62 250 1 221 157 284 127 chr2 219938826 219938904 -33317679 + MIR SINE MIR 108 172 -90 1909 120 114 24 chr2 219938904 219939238 -33317345 + THE1B LTR MaLR 1 364 0 11276 98 25 2 chr2 219939238 219940783 -33315800 + THE1B-int LTR MaLR 1 1580 0 2153 105 68 31 chr2 219940783 219941134 -33315449 + THE1B LTR MaLR 1 364 0 221 157 284 127 chr2 219941134 219941187 -33315396 + MIR SINE MIR 171 262 0 1726 157 15 56 chr2 219941369 219941693 -33314890 + AluJo SINE Alu 1 311 -1 2083 120 40 0 chr2 219941861 219942160 -33314423 + AluSx SINE Alu 1 311 -1 2355 97 0 7 chr2 219942420 219942728 -33313855 - AluSx SINE Alu -6 306 1 270 186 17 0 chr2 219942885 219942944 -33313639 + MLT1F LTR MaLR 26 85 -457 369 230 100 45 chr2 219943061 219943263 -33313320 + MLT1H1 LTR MaLR 328 555 0 294 211 70 0 chr2 219943323 219943394 -33313189 - L1ME3 LINE L1 -50 6112 6037 654 146 0 9 chr2 219943410 219943520 -33313063 - AluJb SINE Alu -203 109 1 479 196 228 0 chr2 219943523 219943681 -33312902 - L1ME3 LINE L1 -272 5890 5697 2663 141 48 30 chr2 219943683 219944179 -33312404 + MLT2B2 LTR ERVL 1 505 -10 299 234 0 13 chr2 219944179 219944256 -33312327 - L1ME3 LINE L1 -487 5677 5602 1869 144 3 55 chr2 219944259 219944585 -33311998 + AluJb SINE Alu 3 311 -1 482 218 9 0 chr2 219944589 219944699 -33311884 - L1ME3 LINE L1 -728 5436 5326 2357 78 0 0 chr2 219944703 219945016 -33311567 - AluSg SINE Alu 0 313 1 244 153 51 0 chr2 219945037 219945096 -33311487 - L1MB4 LINE L1 -3 6177 6116 400 232 70 79 chr2 219945105 219945433 -33311150 - L1ME3 LINE L1 -818 5328 5004 3781 196 75 4 chr2 219945526 219946354 -33310229 - MLT1C-int LTR MaLR -484 887 1 699 228 36 10 chr2 219946354 219946547 -33310036 - MLT1C LTR MaLR 0 467 270 29 0 0 0 chr2 219946547 219946576 -33310007 + AT_rich Low_complexity Low_complexity 1 29 0 2381 110 0 0 chr2 219946627 219946966 -33309617 - AluSx SINE Alu 0 342 4 513 271 10 40 chr2 219946975 219947062 -33309521 - MLT1C LTR MaLR -197 270 182 2589 45 3 3 chr2 219947062 219947370 -33309213 - AluY SINE Alu -3 308 1 513 271 10 40 chr2 219947370 219947481 -33309102 - MLT1C LTR MaLR -285 182 78 751 171 146 0 chr2 219947490 219947654 -33308929 - MLT1C LTR MaLR 0 467 280 23 0 0 0 chr2 219947688 219947711 -33308872 + AT_rich Low_complexity Low_complexity 1 23 0 2164 79 0 0 chr2 219947718 219947984 -33308599 + AluSg SINE Alu 1 266 -44 1297 170 32 50 chr2 219947990 219948094 -33308489 - MLT1C LTR MaLR -190 277 173 2146 137 0 9 chr2 219948094 219948409 -33308174 - AluSx SINE Alu 0 312 1 1297 170 32 50 chr2 219948409 219948586 -33307997 - MLT1C LTR MaLR -294 173 1 238 176 24 129 chr2 219948586 219948668 -33307915 - MLT1C LTR MaLR -317 73 1 312 148 131 0 chr2 219948724 219948785 -33307798 - MER105 DNA DNA -88 116 48 2893 221 112 25 chr2 219948790 219949295 -33307288 - L1MC4 LINE L1 -188 7854 7395 1931 150 20 49 chr2 219949295 219949642 -33306941 - MER1B DNA MER1_type 0 337 1 2893 221 112 25 chr2 219949642 219950150 -33306433 - L1MC4 LINE L1 -647 7395 6752 792 171 9 101 chr2 219950175 219950254 -33306329 - MER3 DNA MER1_type 0 209 124 885 98 41 0 chr2 219950254 219950377 -33306206 + FLAM_C SINE Alu 1 128 -5 792 171 9 101 chr2 219950377 219950514 -33306069 - MER3 DNA MER1_type -85 124 13 336 24 0 0 chr2 219950607 219950648 -33305935 + (CA)n Simple_repeat Simple_repeat 2 42 0 425 350 68 53 chr2 219950710 219951033 -33305550 - L2 LINE L2 -7 3265 2938 1183 108 0 117 chr2 219951280 219951494 -33305089 - AluSq SINE Alu -123 190 2 184 59 59 0 chr2 219952633 219952667 -33303916 + A-rich Low_complexity Low_complexity 9 44 0 2138 129 3 19 chr2 219953010 219953327 -33303256 - AluSx SINE Alu 0 312 1 51 31 0 0 chr2 219953493 219953558 -33303025 + AT_rich Low_complexity Low_complexity 1 65 0 1856 112 0 117 chr2 219954776 219955168 -33301415 - MER7A DNA MER2_type 0 346 3 1003 184 0 0 chr2 219955794 219955957 -33300626 - FRAM SINE Alu -15 161 1 2174 108 17 0 chr2 219956154 219956442 -33300141 + AluSx SINE Alu 1 293 -19 885 89 0 0 chr2 219956442 219956566 -33300017 + (TA)n Simple_repeat Simple_repeat 2 125 0 399 299 100 64 chr2 219956798 219956969 -33299614 + L2 LINE L2 2552 2740 -574 330 87 0 0 chr2 219956969 219957015 -33299568 + (CA)n Simple_repeat Simple_repeat 2 47 0 399 299 100 64 chr2 219957015 219957154 -33299429 + L2 LINE L2 2740 2873 -441 370 113 38 38 chr2 219957182 219957262 -33299321 + LTR56 LTR ERV1 1 80 -365 686 197 0 0 chr2 219957265 219957392 -33299191 + FLAM_A SINE Alu 16 142 0 697 187 71 67 chr2 219957392 219957665 -33298918 + LTR56 LTR ERV1 75 317 -120 2153 139 0 0 chr2 219957665 219957975 -33298608 + AluSx SINE Alu 1 310 -2 697 187 71 67 chr2 219957975 219958097 -33298486 + LTR56 LTR ERV1 317 437 0 453 325 42 114 chr2 219958099 219958530 -33298053 + L2 LINE L2 2872 3271 -1 194 305 32 53 chr2 219958549 219958644 -33297939 + L2 LINE L2 3180 3272 0 1370 200 8 4 chr2 219958779 219959039 -33297544 - AluJo SINE Alu -18 294 34 1468 196 127 21 chr2 219959753 219960171 -33296412 + MLT1C LTR MaLR 6 467 0 2002 60 0 8 chr2 219960440 219960690 -33295893 + AluY SINE Alu 54 301 -10 2233 109 0 0 chr2 219960980 219961274 -33295309 + AluSq SINE Alu 1 294 -19 2257 102 7 0 chr2 219961446 219961750 -33294833 - AluSc SINE Alu -3 306 1 505 239 113 42 chr2 219961805 219962186 -33294397 + L1MC5 LINE L1 7506 7913 -48 408 276 16 32 chr2 219962517 219962702 -33293881 - L1ME4a LINE L1 -202 5919 5738 44 20 0 0 chr2 219962736 219962787 -33293796 + AT_rich Low_complexity Low_complexity 1 51 0 24 0 0 0 chr2 219963616 219963640 -33292943 + AT_rich Low_complexity Low_complexity 1 24 0 1576 195 36 3 chr2 219963857 219964159 -33292424 - AluJb SINE Alu 0 312 1 427 269 23 58 chr2 219964422 219964593 -33291990 - L2 LINE L2 -1 3312 3148 379 307 26 57 chr2 219964752 219964944 -33291639 + L2 LINE L2 3118 3303 -10 193 312 118 0 chr2 219966325 219966418 -33290165 - MIR SINE MIR -75 187 84 231 196 19 140 chr2 219966983 219967090 -33289493 - MIR SINE MIR -3 259 166 1654 145 32 14 chr2 219967391 219967673 -33288910 - AluJo SINE Alu -25 287 1 227 149 40 95 chr2 219968335 219968409 -33288174 - L1ME3A LINE L1 -97 6073 6004 663 308 76 42 chr2 219968707 219969683 -33286900 - L1MEd LINE L1 -4722 1588 563 1861 139 0 0 chr2 219969978 219970271 -33286312 - AluSx SINE Alu 0 308 16 2803 161 61 6 chr2 219970524 219971069 -33285514 + L1MB3 LINE L1 5594 6168 -15 235 283 0 0 chr2 219971738 219971791 -33284792 + GA-rich Low_complexity Low_complexity 3 55 0 212 335 153 24 chr2 219972050 219972298 -33284285 + L2 LINE L2 1669 1948 -1366 1194 230 80 16 chr2 219972444 219973135 -33283448 + Charlie7 DNA MER1_type 1485 2247 -365 247 373 79 32 chr2 219973184 219973310 -33283273 + L2 LINE L2 3139 3270 -2 1784 133 0 4 chr2 219973772 219974042 -33282541 - AluSx SINE Alu 0 312 44 31 0 0 0 chr2 219974150 219974181 -33282402 + AT_rich Low_complexity Low_complexity 1 31 0 531 259 18 107 chr2 219975381 219975605 -33280978 - MIR SINE MIR -13 249 46 36 40 0 0 chr2 219975705 219975755 -33280828 + AT_rich Low_complexity Low_complexity 1 50 0 335 252 45 83 chr2 219975846 219976088 -33280495 - L1ME4a LINE L1 -20 6101 5869 1956 161 3 3 chr2 219976852 219977188 -33279395 + MER1B DNA MER1_type 2 337 0 1902 149 3 0 chr2 219977482 219977778 -33278805 - AluJo SINE Alu -15 297 1 681 233 63 0 chr2 219978029 219978188 -33278395 + MER45A DNA AcHobo 1 169 -9 2111 80 43 3 chr2 219978816 219979117 -33277466 - L1PA5 LINE L1 -1176 4970 4658 7402 41 0 3 chr2 219979117 219980323 -33276260 + L1PA5 LINE L1 4952 6154 0 30 0 0 0 chr2 219980738 219980768 -33275815 + AT_rich Low_complexity Low_complexity 1 30 0 289 181 49 7 chr2 219982087 219982231 -33274352 + (TA)n Simple_repeat Simple_repeat 2 151 0 21 36 0 0 chr2 219982735 219982763 -33273820 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 219983289 219983317 -33273266 + AT_rich Low_complexity Low_complexity 1 28 0 1936 140 20 0 chr2 219983327 219983620 -33272963 + AluSx SINE Alu 1 299 -13 23 54 0 0 chr2 219984057 219984094 -33272489 + AT_rich Low_complexity Low_complexity 1 37 0 24 0 0 0 chr2 219984351 219984375 -33272208 + AT_rich Low_complexity Low_complexity 1 24 0 2358 74 0 17 chr2 219984375 219984673 -33271910 - AluY SINE Alu -18 293 1 33 43 0 0 chr2 219986632 219986679 -33269904 + AT_rich Low_complexity Low_complexity 1 47 0 252 267 85 47 chr2 219987370 219987628 -33268955 + L1MEd LINE L1 948 1215 -4904 1769 157 0 45 chr2 219987656 219987968 -33268615 + AluJb SINE Alu 1 298 -14 1944 228 19 4 chr2 219987992 219988458 -33268125 + L1ME1 LINE L1 5653 6125 -41 3974 43 0 0 chr2 219988576 219989061 -33267522 - L1PA4 LINE L1 -3 6152 5668 932 42 8 0 chr2 219989061 219989179 -33267404 + L1P LINE L1 4866 4984 -1162 452 307 55 0 chr2 219989178 219989396 -33267187 + HAL1 LINE L1 1431 1660 -847 * 888 118 7 0 chr2 219989462 219989606 -33266977 - L1MA5A LINE L1 0 6297 6153 12392 164 40 28 chr2 219989606 219992200 -33264383 + L1MB3 LINE L1 46 2691 -3691 627 148 8 62 chr2 219992694 219992822 -33263761 + L1MA3 LINE L1 15 135 -7430 * 9874 143 75 4 chr2 219992817 219994507 -33262076 + L1MA3 LINE L1 1099 2909 -4656 9782 149 23 43 chr2 219994501 219994722 -33261861 + L1MA3 LINE L1 4648 4872 -2852 * 2314 94 0 7 chr2 219994722 219995021 -33261562 + AluSp SINE Alu 1 297 -16 2115 112 6 16 chr2 219995030 219995343 -33261240 + AluSp SINE Alu 4 313 0 9782 149 23 43 chr2 219995343 219995407 -33261176 + L1MA3 LINE L1 4880 4944 -2780 1701 189 14 3 chr2 219995407 219995704 -33260879 + AluJb SINE Alu 3 302 -10 9782 149 23 43 chr2 219995704 219995728 -33260855 + L1MA3 LINE L1 4944 4967 -2757 2257 87 0 50 chr2 219995728 219996051 -33260532 + AluSc SINE Alu 1 307 -2 9782 149 23 43 chr2 219996051 219996708 -33259875 + L1MA3 LINE L1 4967 5636 -2088 6625 80 2 0 chr2 219996708 219996948 -33259635 + L1PA13 LINE L1 4679 4917 -1246 1950 136 3 10 chr2 219996948 219997257 -33259326 + AluSx SINE Alu 1 307 -5 6625 80 2 0 chr2 219997257 219998505 -33258078 + L1PA13 LINE L1 4917 6161 -2 9782 149 23 43 chr2 219998505 220000663 -33255920 + L1MA3 LINE L1 5636 7718 -6 523 120 40 88 chr2 220000685 220000810 -33255773 + LTR45B LTR ERV1 345 463 -26 9293 213 31 40 chr2 220000836 220001812 -33254771 + L1MB3 LINE L1 2712 3695 -2724 2152 102 0 0 chr2 220001812 220002119 -33254464 + AluSq SINE Alu 1 307 0 9293 213 31 40 chr2 220002119 220003373 -33253210 + L1MB3 LINE L1 3695 4958 -1461 1985 134 0 10 chr2 220003373 220003663 -33252920 + AluSx SINE Alu 1 287 -25 9293 213 31 40 chr2 220003663 220003752 -33252831 + L1MB3 LINE L1 4958 5046 -1373 817 143 0 50 chr2 220003752 220003892 -33252691 + FLAM_C SINE Alu 1 133 0 9293 213 31 40 chr2 220003892 220004355 -33252228 + L1MB3 LINE L1 5046 5511 -908 1858 163 3 10 chr2 220004355 220004662 -33251921 + AluJb SINE Alu 1 305 -7 9293 213 31 40 chr2 220004662 220005595 -33250988 + L1MB3 LINE L1 5511 6398 -21 22 35 0 0 chr2 220005726 220005755 -33250828 + AT_rich Low_complexity Low_complexity 1 29 0 25 75 0 0 chr2 220006502 220006555 -33250028 + AT_rich Low_complexity Low_complexity 1 53 0 1361 167 8 29 chr2 220006936 220007182 -33249401 + L1MC1 LINE L1 6087 6327 -6 212 328 126 35 chr2 220007639 220007813 -33248770 - L2 LINE L2 -534 2780 2591 310 217 43 22 chr2 220007838 220007930 -33248653 + MLT1J1 LTR MaLR 66 159 -287 252 263 50 12 chr2 220008027 220008107 -33248476 + MLT1I LTR MaLR 327 409 0 1784 151 34 0 chr2 220008545 220008837 -33247746 - AluSx SINE Alu -10 302 1 1080 278 77 11 chr2 220009502 220009941 -33246642 - L1MEc LINE L1 -2330 3885 3418 947 159 59 12 chr2 220009941 220010111 -33246472 + MER2 DNA MER2_type 1 178 -167 22 70 0 0 chr2 220010147 220010190 -33246393 + AT_rich Low_complexity Low_complexity 1 43 0 927 264 40 12 chr2 220010355 220010684 -33245899 - L1MEc LINE L1 -2959 3256 2919 797 261 48 35 chr2 220010678 220010989 -33245594 - L1MEc LINE L1 -4582 1814 1500 * 442 246 192 4 chr2 220010987 220011247 -33245336 - L1MEc LINE L1 -5275 1121 813 * 622 328 0 5 chr2 220012200 220012392 -33244191 + MLT1J LTR MaLR 9 199 -312 425 327 149 0 chr2 220013430 220013598 -33242985 + MER91A DNA MER1_type 4 196 0 21 0 0 0 chr2 220013976 220013997 -33242586 + AT_rich Low_complexity Low_complexity 1 21 0 1859 175 0 0 chr2 220014589 220014881 -33241702 + AluJb SINE Alu 1 292 -20 257 206 59 15 chr2 220014894 220014962 -33241621 - HsTC2 DNA Tc2 -1826 72 2 23 0 0 0 chr2 220015015 220015038 -33241545 + AT_rich Low_complexity Low_complexity 1 23 0 1699 145 4 0 chr2 220015048 220015317 -33241266 + L1PA16 LINE L1 5885 6154 -12 492 189 67 74 chr2 220015436 220015630 -33240953 - L1MA7 LINE L1 -1 7332 7133 2032 121 4 0 chr2 220015657 220015963 -33240620 + AluSq SINE Alu 1 307 0 299 209 75 0 chr2 220016047 220016114 -33240469 - L1MA7 LINE L1 -183 7129 7058 6995 215 75 62 chr2 220016130 220016578 -33240005 - L1MA7 LINE L1 -509 6803 6362 1584 182 0 4 chr2 220016578 220016842 -33239741 - AluJb SINE Alu -8 304 42 6995 215 75 62 chr2 220016842 220018143 -33238440 - L1MA7 LINE L1 -950 6362 5080 1529 228 32 0 chr2 220018143 220018489 -33238094 + MLT1A1 LTR MaLR 1 357 -8 6995 215 75 62 chr2 220018489 220022116 -33234467 - L1MA7 LINE L1 -2232 5080 1591 302 333 21 65 chr2 220023042 220023228 -33233355 - L1MA7 LINE L1 -5963 1135 958 266 265 0 0 chr2 220023823 220023872 -33232711 + MIR SINE MIR 34 82 -126 1524 184 38 10 chr2 220024023 220024316 -33232267 + AluJo SINE Alu 5 305 -7 23 33 0 0 chr2 220025729 220025759 -33230824 + AT_rich Low_complexity Low_complexity 1 30 0 23 92 0 0 chr2 220026416 220026481 -33230102 + AT_rich Low_complexity Low_complexity 1 65 0 2364 107 3 0 chr2 220027341 220027651 -33228932 + AluSp SINE Alu 1 311 -2 1704 162 7 23 chr2 220027858 220028161 -33228422 - AluJb SINE Alu -14 298 1 565 265 42 32 chr2 220028432 220028621 -33227962 + MIR SINE MIR 57 247 -15 1470 91 24 0 chr2 220028817 220029027 -33227556 - L1PA13 LINE L1 -2 6161 5947 634 240 35 0 chr2 220029130 220029301 -33227282 - MER3 DNA MER1_type -79 130 1 257 317 139 10 chr2 220029372 220029473 -33227110 + L2 LINE L2 3185 3298 -15 2352 101 0 7 chr2 220029914 220030222 -33226361 + AluSg SINE Alu 1 306 -4 236 167 24 0 chr2 220031665 220031707 -33224876 + L2 LINE L2 3261 3303 -10 23 0 0 0 chr2 220031851 220031874 -33224709 + AT_rich Low_complexity Low_complexity 1 23 0 2171 125 0 0 chr2 220031970 220032266 -33224317 + AluSx SINE Alu 1 296 -16 326 238 57 35 chr2 220032868 220033093 -33223490 + L1MC/D LINE L1 5209 5286 -860 229 234 140 47 chr2 220033223 220033330 -33223253 + L1P2 LINE L1 5706 5822 -332 1709 172 20 0 chr2 220034258 220034560 -33222023 + AluJo SINE Alu 5 312 0 750 153 8 0 chr2 220034570 220034694 -33221889 + AluJb SINE Alu 1 125 -187 402 129 32 0 chr2 220034694 220034756 -33221827 + AluJ/FRAM SINE Alu 232 295 -7 1803 217 112 25 chr2 220034911 220035428 -33221155 + MLT1F1 LTR MaLR 7 567 0 302 325 17 34 chr2 220035812 220035929 -33220654 + L2 LINE L2 3199 3313 0 1125 272 127 13 chr2 220035944 220036425 -33220158 + L2 LINE L2 2770 3309 -4 3929 225 83 27 chr2 220036527 220036610 -33219973 + L1M4 LINE L1 3763 3840 -2306 2187 61 57 4 chr2 220036610 220036889 -33219694 + AluY SINE Alu 1 294 -17 3929 225 83 27 chr2 220036889 220037826 -33218757 + L1M4 LINE L1 3840 4876 -1270 2402 86 3 0 chr2 220037826 220038128 -33218455 - AluSx SINE Alu -9 303 1 3929 225 83 27 chr2 220038128 220038434 -33218149 + L1M4 LINE L1 4876 5164 -982 25 31 0 0 chr2 220038434 220038466 -33218117 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr2 220038607 220038630 -33217953 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 220038708 220038731 -33217852 + AT_rich Low_complexity Low_complexity 1 23 0 241 118 0 0 chr2 220038731 220038782 -33217801 - L1MA2 LINE L1 0 6304 6254 899 124 0 23 chr2 220038789 220038918 -33217665 + FLAM_C SINE Alu 7 132 -11 222 37 0 0 chr2 220039063 220039090 -33217493 + (TA)n Simple_repeat Simple_repeat 1 27 0 21 0 0 0 chr2 220039091 220039112 -33217471 + AT_rich Low_complexity Low_complexity 1 21 0 1161 269 111 47 chr2 220039119 220039677 -33216906 - L2 LINE L2 -782 2532 1939 4186 153 45 14 chr2 220039737 220040517 -33216066 + L1MCa LINE L1 584 1387 -5039 22 56 0 0 chr2 220040536 220040572 -33216011 + AT_rich Low_complexity Low_complexity 1 36 0 346 333 94 0 chr2 220040637 220040754 -33215829 + L2 LINE L2 3141 3268 -4 463 203 120 31 chr2 220040870 220041062 -33215521 - Charlie5 DNA MER1_type 0 2619 2411 1952 104 0 4 chr2 220041696 220041955 -33214628 - AluSg SINE Alu -2 308 51 206 118 0 0 chr2 220042017 220042051 -33214532 + (A)n Simple_repeat Simple_repeat 1 34 0 27 49 0 0 chr2 220042310 220042351 -33214232 + AT_rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr2 220042464 220042486 -33214097 + AT_rich Low_complexity Low_complexity 1 22 0 1668 163 55 15 chr2 220042631 220042957 -33213626 + MER44D DNA MER2_type 1 609 0 337 169 48 36 chr2 220043796 220043879 -33212704 + AluJ/FRAM SINE Alu 216 299 -3 22 80 0 0 chr2 220044520 220044570 -33212013 + AT_rich Low_complexity Low_complexity 1 50 0 181 143 0 0 chr2 220045715 220045743 -33210840 - L2 LINE L2 -14 3299 3272 401 234 174 13 chr2 220046017 220046252 -33210331 + L1ME4a LINE L1 5610 5882 -239 429 36 0 0 chr2 220048128 220048183 -33208400 + (CCG)n Simple_repeat Simple_repeat 3 57 0 281 307 34 0 chr2 220049513 220049601 -33206982 - L2 LINE L2 -4 3309 3219 266 252 271 9 chr2 220049933 220050040 -33206543 - L2 LINE L2 0 3313 3179 2376 58 0 39 chr2 220050157 220050466 -33206117 - AluY SINE Alu -14 297 1 276 345 97 0 chr2 220051194 220051307 -33205276 - L2 LINE L2 -5 3267 3144 714 243 58 26 chr2 220051307 220051533 -33205050 + L2 LINE L2 3081 3313 0 280 287 147 27 chr2 220051532 220051682 -33204901 - MIR SINE MIR -75 187 20 * 939 43 0 0 chr2 220051711 220051827 -33204756 + (CTATT)n Simple_repeat Simple_repeat 1 116 0 363 145 0 0 chr2 220051836 220051905 -33204678 + (CACCC)n Simple_repeat Simple_repeat 5 73 0 1553 184 50 89 chr2 220052211 220052297 -33204286 + L1ME1 LINE L1 5683 5771 -395 2224 110 3 0 chr2 220052297 220052596 -33203987 + AluSq SINE Alu 1 300 -13 1553 184 50 89 chr2 220052596 220052971 -33203612 + L1ME1 LINE L1 5771 6126 -40 397 189 85 85 chr2 220053110 220053263 -33203320 + MER104 DNA Tc2 2 154 -26 684 209 55 89 chr2 220053297 220053532 -33203051 - MLT1J LTR MaLR -112 399 173 862 103 26 5 chr2 220053558 220053753 -33202830 - L1 LINE L1 -1736 4410 4156 2912 48 25 20 chr2 220053795 220054195 -33202388 - L1PA13 LINE L1 -2 6161 5760 1189 233 44 8 chr2 220054195 220054555 -33202028 + L1MD3 LINE L1 4889 5261 -885 1821 237 123 12 chr2 220054555 220055061 -33201522 + REP3 LTR ERV 1 562 0 1608 224 225 9 chr2 220055061 220055783 -33200800 + L1MD3 LINE L1 5257 6139 -27 294 226 182 71 chr2 220055818 220056242 -33200341 + L1MC5 LINE L1 7443 7913 -48 186 353 59 10 chr2 220057526 220057628 -33198955 - MIR SINE MIR -149 113 7 23143 107 16 44 chr2 220057923 220061830 -33194753 + L1PA7 LINE L1 73 3651 -2503 441 0 0 0 chr2 220061830 220061879 -33194704 + (CA)n Simple_repeat Simple_repeat 2 50 0 23143 107 16 44 chr2 220061879 220064305 -33192278 + L1PA7 LINE L1 3651 6143 -11 2167 119 10 0 chr2 220064308 220064610 -33191973 + AluSg SINE Alu 1 305 -5 219 259 0 0 chr2 220064890 220064948 -33191635 + (TTTA)n Simple_repeat Simple_repeat 3 60 0 194 284 23 131 chr2 220066589 220066765 -33189818 - MIR SINE MIR -70 192 36 180 0 0 0 chr2 220067742 220067762 -33188821 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2004 107 28 7 chr2 220067764 220068053 -33188530 - AluSx SINE Alu -17 295 1 1997 140 6 16 chr2 220069045 220069360 -33187223 + AluSx SINE Alu 1 312 0 655 250 0 26 chr2 220070521 220070673 -33185910 - FRAM SINE Alu -15 151 4 23 0 0 0 chr2 220070729 220070752 -33185831 + AT_rich Low_complexity Low_complexity 1 23 0 250 388 73 28 chr2 220071516 220071694 -33184889 - MIR3 SINE MIR -21 187 2 2512 119 3 16 chr2 220072805 220073174 -33183409 + THE1B LTR MaLR 1 364 0 183 250 0 42 chr2 220075060 220075108 -33181475 - L3b LINE CR1 -10 1573 1528 560 243 89 18 chr2 220075501 220075670 -33180913 + MIR SINE MIR 82 262 0 22 56 0 0 chr2 220076064 220076100 -33180483 + AT_rich Low_complexity Low_complexity 1 36 0 28 71 0 0 chr2 220076287 220076343 -33180240 + AT_rich Low_complexity Low_complexity 1 56 0 1824 177 0 0 chr2 220076603 220076885 -33179698 - AluJb SINE Alu -30 282 1 320 224 40 0 chr2 220077713 220077789 -33178794 - MIR SINE MIR -1 261 183 2469 148 20 8 chr2 220077789 220078180 -33178403 + MER61B LTR ERV1 1 396 -29 198 71 0 0 chr2 220078190 220078218 -33178365 - MIR SINE MIR -76 186 159 21 0 0 0 chr2 220078239 220078260 -33178323 + AT_rich Low_complexity Low_complexity 1 21 0 229 319 14 28 chr2 220078702 220078774 -33177809 + L2 LINE L2 1103 1173 -2141 846 296 71 88 chr2 220078816 220078919 -33177664 + L2 LINE L2 1289 1392 -1922 2159 108 0 14 chr2 220078919 220079233 -33177350 - AluSx SINE Alu 0 310 1 846 296 71 88 chr2 220079233 220080116 -33176467 + L2 LINE L2 1392 2259 -1055 25 31 0 0 chr2 220080502 220080534 -33176049 + AT_rich Low_complexity Low_complexity 1 32 0 800 217 0 0 chr2 220080534 220080677 -33175906 - FRAM SINE Alu -30 146 4 313 310 86 59 chr2 220081556 220081743 -33174840 - MIR SINE MIR -70 192 1 2340 103 3 0 chr2 220081855 220082166 -33174417 - AluSx SINE Alu 0 312 1 21 36 0 0 chr2 220082872 220082900 -33173683 + AT_rich Low_complexity Low_complexity 1 28 0 1826 144 39 16 chr2 220082996 220083301 -33173282 + AluJo SINE Alu 1 312 0 230 258 32 0 chr2 220083527 220083620 -33172963 + L2 LINE L2 2152 2247 -1067 575 121 44 0 chr2 220083628 220083719 -33172864 - AluJo SINE Alu -12 300 206 360 328 90 53 chr2 220083894 220084443 -33172140 + L2 LINE L2 2487 3074 -198 404 279 248 9 chr2 220085398 220085717 -33170866 - L1ME4a LINE L1 -9 6112 5718 21 57 0 0 chr2 220085950 220085985 -33170598 + AT_rich Low_complexity Low_complexity 1 35 0 184 256 163 0 chr2 220086140 220086183 -33170400 - L2 LINE L2 -11 3302 3253 1248 158 9 44 chr2 220086414 220086642 -33169941 - AluJo SINE Alu -92 220 1 22 56 0 0 chr2 220087292 220087328 -33169255 + AT_rich Low_complexity Low_complexity 1 36 0 1708 196 0 0 chr2 220087504 220087795 -33168788 + AluJo SINE Alu 1 291 -21 402 260 142 20 chr2 220087851 220088055 -33168528 - L1ME4a LINE L1 0 6121 5893 2076 122 128 18 chr2 220088252 220088636 -33167947 + MSTA LTR MaLR 1 426 -2 2184 110 0 7 chr2 220088671 220088971 -33167612 - AluSq SINE Alu -13 300 3 1548 236 88 25 chr2 220089001 220089476 -33167107 + MLT1D LTR MaLR 1 505 0 311 297 0 0 chr2 220089594 220089658 -33166925 + L2 LINE L2 3201 3264 -8 1618 160 15 4 chr2 220089678 220089940 -33166643 + MER68 LTR ERV1 1 265 -297 2223 99 7 0 chr2 220090058 220090350 -33166233 + AluSq SINE Alu 1 294 -19 279 252 184 10 chr2 220090489 220090592 -33165991 - MIR SINE MIR -78 184 64 191 360 80 0 chr2 220090568 220090668 -33165915 + MIR SINE MIR 23 130 -78 * 746 175 0 44 chr2 220090742 220090879 -33165704 + AluJo SINE Alu 4 134 -178 536 15 29 0 chr2 220091305 220091373 -33165210 + (GAAA)n Simple_repeat Simple_repeat 3 72 0 275 311 49 102 chr2 220092427 220092752 -33163831 + L2 LINE L2 2948 3255 -58 294 204 0 0 chr2 220093705 220093798 -33162785 + A-rich Low_complexity Low_complexity 1 93 0 34 0 0 0 chr2 220093868 220093902 -33162681 + AT_rich Low_complexity Low_complexity 1 34 0 855 287 68 41 chr2 220093937 220094483 -33162100 - L1ME4a LINE L1 -299 5822 5260 216 0 0 0 chr2 220094714 220094738 -33161845 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 27 49 0 0 chr2 220094954 220094995 -33161588 + AT_rich Low_complexity Low_complexity 1 41 0 1725 164 32 29 chr2 220095116 220095427 -33161156 - AluJo SINE Alu 0 312 1 1022 153 0 0 chr2 220096157 220096337 -33160246 + AluJo SINE Alu 136 315 0 1421 171 3 44 chr2 220096507 220096800 -33159783 + MER47A DNA MER2_type 7 287 -79 337 97 306 0 chr2 220096937 220096999 -33159584 + MER47A DNA MER2_type 286 366 0 451 217 14 29 chr2 220098270 220098408 -33158175 - Charlie2 DNA MER1_type 0 2862 2727 2000 153 3 3 chr2 220098559 220098867 -33157716 - AluSx SINE Alu -2 310 3 1037 247 14 140 chr2 220098926 220099215 -33157368 - L2 LINE L2 0 3313 3134 815 139 8 0 chr2 220099215 220099344 -33157239 + FLAM_C SINE Alu 1 130 -3 1037 247 14 140 chr2 220099344 220099638 -33156945 - L2 LINE L2 -179 3134 2804 181 382 101 0 chr2 220099808 220099897 -33156686 - MIR SINE MIR -128 134 37 470 217 202 0 chr2 220100230 220100359 -33156224 + MER5A DNA MER1_type 21 175 -14 1493 193 58 25 chr2 220100419 220100812 -33155771 + Charlie1 DNA MER1_type 2345 2750 -11 2035 70 22 18 chr2 220100817 220101089 -33155494 + AluSg SINE Alu 32 304 -6 248 35 0 0 chr2 220102560 220102589 -33153994 - LTR14A LTR ERVK -137 207 179 998 66 0 0 chr2 220102623 220102744 -33153839 - AluY SINE Alu -190 121 1 240 281 105 26 chr2 220103023 220103137 -33153446 + L1MC4 LINE L1 7331 7453 -589 527 60 25 245 chr2 220103146 220103301 -33153282 + LTR14B LTR ERVK 1 339 -242 428 305 28 0 chr2 220103311 220103452 -33153131 + MIR SINE MIR 118 262 0 25 0 0 0 chr2 220103740 220103765 -33152818 + AT_rich Low_complexity Low_complexity 1 25 0 1714 178 26 7 chr2 220104496 220104800 -33151783 + AluJb SINE Alu 1 310 -2 1615 116 4 0 chr2 220105187 220105419 -33151164 - AluSp SINE Alu -80 233 1 934 282 98 56 chr2 220105443 220106205 -33150378 - LTR1B LTR ERV1 0 826 33 388 108 0 46 chr2 220106209 220106274 -33150309 - MLT1A2 LTR MaLR -312 62 1 287 245 61 110 chr2 220106381 220106478 -33150105 - L2 LINE L2 -1 3312 3225 1456 110 5 23 chr2 220106478 220106696 -33149887 - AluSq SINE Alu -23 290 77 287 245 61 110 chr2 220106696 220106761 -33149822 - L2 LINE L2 -88 3225 3158 317 252 196 0 chr2 220106961 220107068 -33149515 + MIR SINE MIR 83 210 -52 186 43 0 0 chr2 220107974 220107997 -33148586 + (GA)n Simple_repeat Simple_repeat 2 24 0 266 232 0 17 chr2 220109139 220109205 -33147378 - MIR SINE MIR -80 128 64 595 209 104 57 chr2 220110245 220110475 -33146108 + MLT1C LTR MaLR 3 243 -224 2093 129 21 62 chr2 220110488 220110874 -33145709 + LTR57 LTR ERVL 1 370 -41 2074 111 52 41 chr2 220110875 220111244 -33145339 - THE1C LTR MaLR 0 375 3 594 187 161 19 chr2 220111292 220111447 -33145136 + MLT1C LTR MaLR 267 443 -24 574 230 0 37 chr2 220111475 220111610 -33144973 + MLT1C LTR MaLR 338 467 0 508 288 195 0 chr2 220111763 220111978 -33144605 + MLT1H LTR MaLR 1 257 -292 330 262 22 109 chr2 220112297 220112480 -33144103 - MLT1J1 LTR MaLR -266 180 14 210 228 131 46 chr2 220113390 220113499 -33143084 - MER5B DNA MER1_type -9 177 70 629 178 0 0 chr2 220113539 220113646 -33142937 - MLT1D LTR MaLR 0 505 399 2450 133 57 5 chr2 220113646 220114068 -33142515 - MER4B-int LTR ERV1 -957 5801 5358 587 195 122 0 chr2 220114068 220114191 -33142392 - MLT1D LTR MaLR -95 410 273 1254 184 42 86 chr2 220114194 220114530 -33142053 + MLT1B LTR MaLR 70 390 0 2938 301 52 29 chr2 220114531 220115623 -33140960 - HERV16 LTR ERVL -2794 2202 934 1799 160 25 0 chr2 220115623 220115905 -33140678 - AluSx SINE Alu -23 289 1 2938 301 52 29 chr2 220115905 220116481 -33140102 - HERV16 LTR ERVL -4062 934 373 992 82 11 33 chr2 220116611 220116640 -33139943 + (TTTC)n Simple_repeat Simple_repeat 1 208 0 992 82 11 33 chr2 220116640 220116824 -33139759 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2222 108 10 0 chr2 220116860 220117165 -33139418 - AluSg SINE Alu -2 308 1 1628 213 100 15 chr2 220117166 220117566 -33139017 + MLT1C LTR MaLR 34 467 0 471 335 50 15 chr2 220117575 220117835 -33138748 - HERV16 LTR ERVL -4714 282 14 1096 247 53 0 chr2 220117854 220118117 -33138466 - LTR16A LTR ERVL -6 444 168 22 0 0 0 chr2 220118895 220118917 -33137666 + AT_rich Low_complexity Low_complexity 1 22 0 2353 104 3 0 chr2 220118926 220119235 -33137348 + AluSq SINE Alu 1 310 -3 5885 198 34 23 chr2 220119302 220121670 -33134913 - L1MC1 LINE L1 -1 6332 3932 21 0 0 0 chr2 220121979 220122000 -33134583 + AT_rich Low_complexity Low_complexity 1 21 0 439 170 53 11 chr2 220122058 220122152 -33134431 + MER5A DNA MER1_type 90 187 -2 426 304 56 48 chr2 220122179 220122359 -33134224 + L1MC4a LINE L1 5671 5848 -1960 2035 138 3 0 chr2 220122359 220122664 -33133919 + AluSx SINE Alu 1 306 -6 426 304 56 48 chr2 220122664 220122703 -33133880 + L1MC4a LINE L1 5848 5895 -1913 2324 85 0 3 chr2 220122703 220122998 -33133585 - AluY SINE Alu -17 294 1 426 304 56 48 chr2 220122998 220123027 -33133556 + L1MC4a LINE L1 5895 5922 -1886 2663 92 11 0 chr2 220123029 220123388 -33133195 - THE1B LTR MaLR -1 363 1 3846 158 119 67 chr2 220123473 220124491 -33132092 - MER11C LTR ERVK 0 1071 1 629 298 57 15 chr2 220124722 220124984 -33131599 - Charlie8 DNA MER1_type -2142 275 3 186 167 0 0 chr2 220125308 220125344 -33131239 + (TA)n Simple_repeat Simple_repeat 2 37 0 617 268 91 63 chr2 220126044 220126088 -33130495 + MIR SINE MIR 1 42 -220 1814 123 6 69 chr2 220126088 220126271 -33130312 - AluSq SINE Alu -15 298 142 1825 146 13 0 chr2 220126271 220126573 -33130010 - AluY SINE Alu -5 306 1 1814 123 6 69 chr2 220126573 220126706 -33129877 - AluSq SINE Alu -171 142 2 617 268 91 63 chr2 220126706 220126915 -33129668 + MIR SINE MIR 42 261 -1 441 261 49 35 chr2 220127726 220127868 -33128715 + MER5B DNA MER1_type 1 144 -34 1859 137 0 46 chr2 220127871 220128177 -33128406 + AluSx SINE Alu 1 292 -20 358 367 8 0 chr2 220129191 220129319 -33127264 - L2 LINE L2 0 3313 3185 207 200 86 86 chr2 220129463 220129533 -33127050 + MER5B DNA MER1_type 76 145 -33 318 352 126 5 chr2 220129648 220129847 -33126736 + L2 LINE L2 2717 2939 -375 459 101 13 63 chr2 220130076 220130155 -33126428 + LTR32 LTR ERVL 15 89 -382 1211 157 16 52 chr2 220130174 220130423 -33126160 + LTR32 LTR ERVL 232 471 0 289 200 0 0 chr2 220130751 220130801 -33125782 + L1MC4 LINE L1 7833 7882 -160 2237 134 66 5 chr2 220130820 220131200 -33125383 - LTR42 LTR ERVL -92 403 1 339 201 62 0 chr2 220131269 220131360 -33125223 + L1MC4 LINE L1 7908 7995 0 3776 268 163 12 chr2 220131580 220133194 -33123389 - L2 LINE L2 -9 3304 1434 233 283 60 54 chr2 220135228 220135394 -33121189 + L2 LINE L2 3080 3246 -67 615 122 0 0 chr2 220135788 220135878 -33120705 - L1PA8 LINE L1 -20 6152 6063 21 36 0 0 chr2 220136513 220136541 -33120042 + AT_rich Low_complexity Low_complexity 1 28 0 707 206 8 0 chr2 220136921 220137047 -33119536 - FLAM_A SINE Alu -6 127 1 838 236 100 85 chr2 220137200 220137704 -33118879 - L1MC4a LINE L1 -1876 5932 5414 2046 121 0 14 chr2 220137704 220137993 -33118590 - AluSx SINE Alu -27 285 1 838 236 100 85 chr2 220137993 220138157 -33118426 - L1MC4a LINE L1 -2394 5414 5254 317 349 89 26 chr2 220138177 220138481 -33118102 - L1MC4a LINE L1 -921 5225 4903 256 186 14 14 chr2 220138604 220138674 -33117909 + CT-rich Low_complexity Low_complexity 4 73 0 33 56 0 0 chr2 220138724 220138778 -33117805 + AT_rich Low_complexity Low_complexity 1 54 0 253 313 123 34 chr2 220138882 220139061 -33117522 + MIR3 SINE MIR 14 208 0 642 289 111 4 chr2 220140182 220140417 -33116166 + MIR SINE MIR 3 262 0 22 0 0 0 chr2 220140865 220140887 -33115696 + AT_rich Low_complexity Low_complexity 1 22 0 1626 176 0 40 chr2 220140971 220141272 -33115311 + AluJb SINE Alu 1 289 -23 1039 175 17 6 chr2 220141297 220141474 -33115109 + AluJb SINE Alu 134 312 0 1601 167 30 0 chr2 220141770 220142070 -33114513 - L1MA5 LINE L1 -2 6298 5990 955 154 93 0 chr2 220142127 220142239 -33114344 + AluJo SINE Alu 5 138 -174 180 77 0 0 chr2 220142239 220142265 -33114318 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 955 154 93 0 chr2 220142265 220142314 -33114269 + AluJo SINE Alu 138 181 -131 4043 166 44 9 chr2 220142337 220142611 -33113972 - L1MA5 LINE L1 -224 6076 5813 225 0 0 0 chr2 220142611 220142636 -33113947 + (TG)n Simple_repeat Simple_repeat 2 26 0 * 246 62 0 0 chr2 220142635 220142667 -33113916 + (TA)n Simple_repeat Simple_repeat 1 32 0 4043 166 44 9 chr2 220142636 220143210 -33113373 - L1MA5 LINE L1 -487 5813 5224 4731 35 0 0 chr2 220143404 220143968 -33112615 + L1PA4 LINE L1 5592 6155 0 281 148 49 33 chr2 220144133 220144194 -33112389 + L1MD2 LINE L1 5830 5891 -468 1451 226 76 18 chr2 220144304 220144685 -33111898 + L1MD2 LINE L1 5924 6326 -33 23 0 0 0 chr2 220145709 220145732 -33110851 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr2 220145848 220145880 -33110703 + AT_rich Low_complexity Low_complexity 1 32 0 2380 81 3 0 chr2 220146201 220146498 -33110085 - AluY SINE Alu -13 298 1 246 320 52 41 chr2 220146975 220147072 -33109511 - MER91A DNA MER1_type -5 191 94 300 336 115 0 chr2 220147081 220147194 -33109389 - MER91A DNA MER1_type -26 170 45 2305 101 0 0 chr2 220148201 220148497 -33108086 - AluSx SINE Alu -16 296 1 1626 175 31 7 chr2 220148817 220149108 -33107475 + AluJo SINE Alu 9 306 -6 620 331 0 6 chr2 220150152 220150333 -33106250 + LTR33 LTR ERVL 14 193 -328 30 83 0 0 chr2 220150463 220150535 -33106048 + AT_rich Low_complexity Low_complexity 1 72 0 581 298 19 53 chr2 220150578 220150786 -33105797 + MIR SINE MIR 14 214 -48 2093 120 0 7 chr2 220150829 220151136 -33105447 - AluSg SINE Alu 0 305 1 675 215 23 0 chr2 220151164 220151294 -33105289 + FLAM_C SINE Alu 1 133 0 687 128 9 0 chr2 220151357 220151466 -33105117 + HY1 scRNA scRNA 1 110 -2 2113 184 59 0 chr2 220151787 220152178 -33104405 + MLT2C2 LTR ERVL 1 414 -50 282 129 0 0 chr2 220152273 220152322 -33104261 + MLT2C1 LTR ERVL 357 397 0 1954 154 30 33 chr2 220153486 220153808 -33102775 - THE1C LTR MaLR 0 375 53 2363 79 0 10 chr2 220153808 220154111 -33102472 - AluSc SINE Alu -9 300 1 1954 154 30 33 chr2 220154111 220154151 -33102432 - THE1C LTR MaLR -322 53 14 249 403 90 0 chr2 220154520 220154654 -33101929 + L2 LINE L2 3116 3261 -11 638 251 66 66 chr2 220155144 220155371 -33101212 - MIR SINE MIR -35 227 1 8995 85 28 2 chr2 220156615 220158212 -33098371 - L1P3 LINE L1 -520 5652 4019 646 291 133 66 chr2 220158542 220158788 -33097795 - L2 LINE L2 -233 3039 2811 1924 140 7 23 chr2 220158788 220159088 -33097495 + AluSc SINE Alu 1 295 -14 646 291 133 66 chr2 220159088 220159894 -33096689 - L2 LINE L2 -461 2811 1935 8878 165 58 68 chr2 220160141 220160772 -33095811 - L1MA5 LINE L1 -2 7319 6683 2667 107 0 3 chr2 220160772 220161137 -33095446 - THE1B LTR MaLR 0 364 1 8878 165 58 68 chr2 220161137 220161595 -33094988 - L1MA5 LINE L1 -638 6683 6222 1928 145 0 3 chr2 220161595 220161885 -33094698 - AluSg SINE Alu -15 295 7 8878 165 58 68 chr2 220161885 220162730 -33093853 - L1MA5 LINE L1 -1099 6222 5370 2235 79 41 0 chr2 220162730 220163022 -33093561 - AluY SINE Alu -7 304 1 8878 165 58 68 chr2 220163022 220164437 -33092146 - L1MA5 LINE L1 -1951 5370 4047 1450 214 10 13 chr2 220164437 220164736 -33091847 - AluJo SINE Alu -14 298 1 8878 165 58 68 chr2 220164736 220166158 -33090425 - L1MA5 LINE L1 -3274 4047 2612 9892 178 38 50 chr2 220166159 220168115 -33088468 - L1MA5 LINE L1 -5224 1944 13 61 64 0 0 chr2 220168119 220168229 -33088354 + AT_rich Low_complexity Low_complexity 1 110 0 254 229 215 49 chr2 220168230 220168374 -33088209 - MIR SINE MIR -66 196 29 674 268 107 0 chr2 220168966 220169171 -33087412 - MER115 DNA AcHobo -1 692 466 788 333 47 25 chr2 220169253 220169574 -33087009 - MER115 DNA AcHobo -365 328 1 854 210 40 30 chr2 220170832 220171032 -33085551 - MER3 DNA MER1_type -7 202 1 25 31 0 0 chr2 220171286 220171318 -33085265 + AT_rich Low_complexity Low_complexity 1 32 0 409 33 0 33 chr2 220172165 220172226 -33084357 + (CA)n Simple_repeat Simple_repeat 1 59 0 856 210 35 15 chr2 220173165 220173365 -33083218 - L1MD2 LINE L1 -26 6333 6130 790 250 5 5 chr2 220174236 220174424 -33082159 + MER58A DNA MER1_type 37 224 0 779 170 88 16 chr2 220174432 220174626 -33081957 + MER3 DNA MER1_type 1 208 -1 25 65 0 0 chr2 220175346 220175392 -33081191 + AT_rich Low_complexity Low_complexity 1 46 0 265 271 68 42 chr2 220175723 220175841 -33080742 + MIR3 SINE MIR 65 185 -23 25 0 0 0 chr2 220177981 220178006 -33078577 + AT_rich Low_complexity Low_complexity 1 25 0 223 178 0 0 chr2 220179221 220179266 -33077317 + (CTGGGG)n Simple_repeat Simple_repeat 6 50 0 249 254 0 22 chr2 220180587 220180721 -33075862 + (TA)n Simple_repeat Simple_repeat 2 132 0 26 30 0 0 chr2 220181391 220181424 -33075159 + AT_rich Low_complexity Low_complexity 1 33 0 424 248 46 18 chr2 220181663 220181772 -33074811 - L1MC3 LINE L1 -443 7342 7231 * 1882 185 8 63 chr2 220181762 220181999 -33074584 + L1MC3 LINE L1 7336 7536 -249 2245 84 10 7 chr2 220181999 220182307 -33074276 + AluSc SINE Alu 1 309 0 1882 185 8 63 chr2 220182307 220182545 -33074038 + L1MC3 LINE L1 7536 7785 0 359 324 195 14 chr2 220183306 220183593 -33072990 - L2 LINE L2 0 3272 2934 21 36 0 0 chr2 220184471 220184499 -33072084 + AT_rich Low_complexity Low_complexity 1 28 0 288 208 125 28 chr2 220185290 220185362 -33071221 - MIR SINE MIR -71 191 113 1032 141 5 52 chr2 220185393 220185585 -33070998 + FRAM SINE Alu 1 175 -1 2101 126 3 17 chr2 220185747 220186048 -33070535 + AluSg SINE Alu 1 297 -13 382 359 109 11 chr2 220186244 220186698 -33069885 + L2 LINE L2 2756 3265 -48 186 103 0 0 chr2 220186721 220186750 -33069833 + (TGAA)n Simple_repeat Simple_repeat 2 30 0 310 351 87 0 chr2 220186823 220187008 -33069575 + L3b LINE CR1 1103 1303 -280 739 241 46 36 chr2 220187883 220187974 -33068609 + L1ME3A LINE L1 5599 5688 -482 2236 110 0 3 chr2 220187974 220188266 -33068317 + AluSq SINE Alu 1 291 -22 739 241 46 36 chr2 220188266 220188694 -33067889 + L1ME3A LINE L1 5688 6165 -5 388 297 182 23 chr2 220190334 220190681 -33065902 + L2 LINE L2 2839 3240 -73 11150 172 25 25 chr2 220190744 220191670 -33064913 - L1M1 LINE L1 -578 5725 4801 1900 156 3 7 chr2 220191670 220191971 -33064612 - AluSx SINE Alu -12 300 1 11150 172 25 25 chr2 220191971 220193936 -33062647 - L1M1 LINE L1 -1502 4801 2821 2956 164 50 5 chr2 220193943 220194503 -33062080 - L1PA16 LINE L1 -20 6146 5562 7573 227 25 17 chr2 220194511 220194991 -33061592 - L1 LINE L1 -1810 5039 4564 2724 118 39 5 chr2 220194991 220195433 -33061150 - L1PA16 LINE L1 0 6166 5710 7573 227 25 17 chr2 220195433 220196948 -33059635 - L1 LINE L1 -2285 4564 3028 3778 103 18 12 chr2 220196915 220197515 -33059068 - L1PA7 LINE L1 -2232 4617 4014 * 9800 97 11 1 chr2 220197515 220199732 -33056851 + L1PA7 LINE L1 3893 6151 -3 7172 233 149 28 chr2 220199741 220200412 -33056171 - L1PA15-16 LINE L1 -3828 3021 2432 2545 99 11 3 chr2 220200412 220200764 -33055819 + THE1A LTR MaLR 1 355 0 7172 233 149 28 chr2 220200764 220201538 -33055045 - L1PA15-16 LINE L1 -4417 2432 1753 690 13 0 0 chr2 220201538 220201617 -33054966 + (TA)n Simple_repeat Simple_repeat 1 79 0 7172 233 149 28 chr2 220201617 220202854 -33053729 - L1PA15-16 LINE L1 -5096 1753 2 2493 191 40 15 chr2 220202865 220203789 -33052794 - L1 LINE L1 -3314 3534 2588 5141 148 21 13 chr2 220203800 220204157 -33052426 - L1PA16 LINE L1 -1 6165 5812 2307 102 50 19 chr2 220204157 220204521 -33052062 - THE1C LTR MaLR 0 375 1 5141 148 21 13 chr2 220204521 220205066 -33051517 - L1PA16 LINE L1 -354 5812 5256 4163 214 33 36 chr2 220205061 220205941 -33050642 - L1 LINE L1 -1602 4544 3667 * 405 0 0 0 chr2 220205941 220205986 -33050597 + (TG)n Simple_repeat Simple_repeat 2 46 0 4163 214 33 36 chr2 220205986 220206228 -33050355 - L1 LINE L1 -2479 3667 3426 5860 113 12 4 chr2 220206234 220207246 -33049337 - L1PB1 LINE L1 -3 6148 5143 1588 186 40 14 chr2 220209206 220209502 -33047081 - AluJo SINE Alu -8 304 1 23 33 0 0 chr2 220210320 220210350 -33046233 + AT_rich Low_complexity Low_complexity 1 30 0 2196 108 3 7 chr2 220210446 220210751 -33045832 + AluSp SINE Alu 1 304 -9 2157 134 0 0 chr2 220210767 220211065 -33045518 + AluSx SINE Alu 2 299 -13 316 24 24 0 chr2 220212359 220212401 -33044182 + MADE1 DNA Mariner 1 43 -37 378 0 0 0 chr2 220212931 220212973 -33043610 + (TA)n Simple_repeat Simple_repeat 2 43 0 185 341 141 24 chr2 220213538 220213708 -33042875 + MIR3 SINE MIR 14 203 -5 417 321 158 5 chr2 220215435 220215650 -33040933 + MIR SINE MIR 15 262 0 4955 220 14 13 chr2 220216215 220217571 -33039012 - L1 LINE L1 -1641 4505 3149 3674 131 17 34 chr2 220217770 220218423 -33038160 + L1PA15-16 LINE L1 1313 1955 -4894 2396 104 0 0 chr2 220218423 220218732 -33037851 + AluSc SINE Alu 1 309 0 3674 131 17 34 chr2 220218732 220218781 -33037802 + L1PA15-16 LINE L1 1955 2003 -4846 186 43 0 0 chr2 220218846 220218869 -33037714 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 2299 274 22 9 chr2 220218872 220219744 -33036839 + L1 LINE L1 2562 3444 -2702 402 231 161 0 chr2 220219737 220219979 -33036604 + L1PBa LINE L1 46 326 -6537 * 6669 196 23 7 chr2 220220225 220221643 -33034940 - L1PA15-16 LINE L1 -5474 1375 1 650 136 0 9 chr2 220221649 220221759 -33034824 - L1M2 LINE L1 -4248 2601 2493 544 103 31 21 chr2 220221759 220221856 -33034727 + MER4A LTR ERV1 1 98 -566 404 126 42 13 chr2 220221856 220221975 -33034608 + MER4A LTR ERV1 261 441 -223 2560 127 35 111 chr2 220221983 220222604 -33033979 - LTR10A LTR ERV1 -21 612 1 8282 235 16 18 chr2 220222605 220224662 -33031921 - LTR10A-int LTR ERV1 -3 6646 4592 12478 140 55 11 chr2 220224907 220225838 -33030745 - Tigger2 DNA MER2_type -52 2666 1777 1430 209 117 15 chr2 220225838 220226240 -33030343 - LTR47B LTR ERVL 0 443 1 12478 140 55 11 chr2 220226240 220227590 -33028993 - Tigger2 DNA MER2_type -941 1777 285 2311 90 0 13 chr2 220227598 220227909 -33028674 - AluYb8 SINE Alu -11 307 1 3125 133 20 2 chr2 220227928 220228416 -33028167 - LOR1a LTR ERV1 0 497 1 431 299 84 43 chr2 220228416 220228745 -33027838 + L2 LINE L2 2737 3080 -192 203 286 0 0 chr2 220228919 220228975 -33027608 + (TAAA)n Simple_repeat Simple_repeat 3 58 0 361 306 88 37 chr2 220229335 220229551 -33027032 + MIR SINE MIR 15 241 -21 267 289 232 24 chr2 220229734 220229980 -33026603 + L3b LINE CR1 1169 1465 -118 330 26 0 0 chr2 220230159 220230198 -33026385 + (TC)n Simple_repeat Simple_repeat 1 39 0 1779 126 39 3 chr2 220230263 220230549 -33026034 + AluSx SINE Alu 5 300 -12 967 275 6 3 chr2 220230733 220231086 -33025497 - L1 LINE L1 -2983 3879 3526 25342 115 13 6 chr2 220231109 220232385 -33024198 - L1PA8 LINE L1 -13 6474 5209 1875 138 59 0 chr2 220232385 220232674 -33023909 - AluSc SINE Alu -3 306 1 25342 115 13 6 chr2 220232674 220236448 -33020135 - L1PA8 LINE L1 -1278 5209 1387 * 41029 52 2 0 chr2 220236447 220242588 -33013995 + L1PA4 LINE L1 2 6152 -3 8236 133 29 8 chr2 220242592 220243565 -33013018 - L1PA8 LINE L1 -5068 1393 383 198 0 0 0 chr2 220243565 220243587 -33012996 + (CAAA)n Simple_repeat Simple_repeat 4 25 0 8236 133 29 8 chr2 220243587 220243973 -33012610 - L1PA8 LINE L1 -6078 383 6 10455 157 115 14 chr2 220243979 220244747 -33011836 - L1PBa LINE L1 -3325 3537 2848 2257 128 0 7 chr2 220244747 220245053 -33011530 - AluSx SINE Alu -8 304 1 10455 157 115 14 chr2 220245053 220247201 -33009382 - L1PBa LINE L1 -4014 2848 327 1199 172 201 7 chr2 220247317 220247596 -33008987 - BaEV-int LTR ERV1 -2622 4027 3695 * 3919 92 34 27 chr2 220247573 220247803 -33008780 - BaEV-int LTR ERV1 -4320 2576 2349 2323 100 0 3 chr2 220247803 220248112 -33008471 - AluY SINE Alu -3 308 1 3919 92 34 27 chr2 220248112 220248538 -33008045 - BaEV-int LTR ERV1 -4547 2349 1912 2821 13 0 0 chr2 220248538 220248847 -33007736 - AluYa5 SINE Alu -2 309 1 3919 92 34 27 chr2 220248847 220248899 -33007684 - BaEV-int LTR ERV1 -4984 1912 1862 4248 257 102 13 chr2 220248899 220250109 -33006474 - L1M2 LINE L1 -5481 1368 51 2228 161 16 44 chr2 220250167 220250603 -33005980 + MSTC LTR MaLR 1 424 -4 438 245 0 0 chr2 220250686 220250784 -33005799 - FRAM SINE Alu -7 169 72 1199 235 34 23 chr2 220251144 220251408 -33005175 - AluJo SINE Alu -23 289 23 2176 223 10 14 chr2 220251526 220252032 -33004551 - MLT1F LTR MaLR 0 542 39 410 307 73 39 chr2 220253001 220253411 -33003172 + L1ME3A LINE L1 5525 5948 -222 201 74 0 0 chr2 220254010 220254037 -33002546 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1861 156 3 3 chr2 220254040 220254322 -33002261 - AluSx SINE Alu -30 282 1 21 0 0 0 chr2 220254323 220254344 -33002239 + AT_rich Low_complexity Low_complexity 1 21 0 2163 118 13 0 chr2 220254522 220254828 -33001755 - AluSq SINE Alu -3 310 1 27 0 0 0 chr2 220254865 220254892 -33001691 + AT_rich Low_complexity Low_complexity 1 27 0 232 246 49 16 chr2 220255165 220255226 -33001357 + L2 LINE L2 3251 3313 0 1600 245 8 62 chr2 220256268 220256802 -32999781 + L1M3e LINE L1 466 970 -6519 2446 234 70 28 chr2 220257020 220257952 -32998631 + L1M3e LINE L1 2017 2987 -4578 1082 215 165 4 chr2 220257952 220258066 -32998517 + AluJb SINE Alu 1 95 -217 276 30 0 0 chr2 220258066 220258099 -32998484 + (CA)n Simple_repeat Simple_repeat 2 34 0 1082 215 165 4 chr2 220258099 220258226 -32998357 + AluJb SINE Alu 95 281 -31 7889 174 62 102 chr2 220258246 220259596 -32996987 + L1M3e LINE L1 2977 4380 -3185 979 227 29 54 chr2 220259596 220259660 -32996923 + AluJo SINE Alu 37 101 -211 1787 149 116 15 chr2 220259660 220259989 -32996594 + THE1B LTR MaLR 3 364 0 11200 93 25 7 chr2 220259989 220261541 -32995042 + THE1B-int LTR MaLR 1 1580 0 2124 131 73 12 chr2 220261541 220261884 -32994699 + THE1B LTR MaLR 1 364 0 979 227 29 54 chr2 220261884 220262095 -32994488 + AluJo SINE Alu 98 307 -5 7889 174 62 102 chr2 220262095 220263499 -32993084 + L1M3e LINE L1 4380 5890 -1675 1833 67 18 0 chr2 220266498 220266722 -32989861 + AluSp SINE Alu 70 297 -16 191 278 69 14 chr2 220268481 220268553 -32988030 - MIR3 SINE MIR -3 205 130 539 310 29 11 chr2 220268613 220268787 -32987796 + MIR SINE MIR 51 227 -35 315 254 119 0 chr2 220269665 220269783 -32986800 - MER94 DNA DNA -2 132 1 258 286 99 0 chr2 220270032 220270123 -32986460 - L2 LINE L2 0 3272 3173 259 229 14 0 chr2 220270858 220270928 -32985655 - MER116 DNA Mariner -5 75 5 313 327 31 43 chr2 220271980 220272142 -32984441 + MIR3 SINE MIR 38 197 -11 355 213 32 90 chr2 220272341 220272496 -32984087 - MER69 DNA AcHobo -1 2525 2380 367 152 15 15 chr2 220272651 220272717 -32983866 - MER69 DNA AcHobo -2460 66 1 1298 192 36 63 chr2 220272877 220273215 -32983368 - L1MD3 LINE L1 0 7995 7666 1733 122 89 0 chr2 220273215 220273485 -32983098 - AluY SINE Alu -17 294 1 1298 192 36 63 chr2 220273485 220273511 -32983072 - L1MD3 LINE L1 -329 7666 7641 1396 102 0 0 chr2 220273513 220273689 -32982894 + AluSq SINE Alu 1 176 -137 528 180 9 8 chr2 220273931 220274053 -32982530 - L1MC4 LINE L1 -345 7650 7437 * 973 214 36 9 chr2 220274040 220274264 -32982319 - L1MD3 LINE L1 -983 7012 6783 238 322 194 22 chr2 220274497 220274724 -32981859 + L2 LINE L2 2434 2699 -615 747 243 18 6 chr2 220274842 220275011 -32981572 - MER5A DNA MER1_type -2 187 17 1127 186 126 85 chr2 220275932 220276415 -32980168 + Charlie4a DNA MER1_type 4 506 -2 191 384 68 8 chr2 220278546 220278679 -32977904 - L2 LINE L2 -9 3263 3123 31 26 0 0 chr2 220279113 220279151 -32977432 + AT_rich Low_complexity Low_complexity 1 38 0 697 237 38 21 chr2 220279395 220279581 -32977002 - MER5A DNA MER1_type 0 189 1 21 57 0 0 chr2 220279810 220279845 -32976738 + AT_rich Low_complexity Low_complexity 1 35 0 5019 70 3 50 chr2 220279954 220280677 -32975906 - L1PA7 LINE L1 -3 6151 5463 28325 118 51 71 chr2 220280726 220283487 -32973096 - L1PA7 LINE L1 -690 5464 2649 216 0 0 0 chr2 220283487 220283511 -32973072 + (TA)n Simple_repeat Simple_repeat 2 25 0 28325 118 51 71 chr2 220283511 220283611 -32972972 - L1PA7 LINE L1 -3505 2649 2549 423 0 0 0 chr2 220283611 220283658 -32972925 + (TA)n Simple_repeat Simple_repeat 1 47 0 28325 118 51 71 chr2 220283658 220286363 -32970220 - L1PA7 LINE L1 -3605 2549 12 4534 165 39 24 chr2 220286510 220287368 -32969215 - L1MB1 LINE L1 -51 6117 5273 1994 183 19 8 chr2 220287368 220287729 -32968854 + MLT1A1 LTR MaLR 1 365 0 4534 165 39 24 chr2 220287729 220287743 -32968840 - L1MB1 LINE L1 -895 5273 5261 13793 136 41 14 chr2 220287743 220290096 -32966487 - Tigger1 DNA MER2_type 0 2418 1 4534 165 39 24 chr2 220290096 220290344 -32966239 - L1MB1 LINE L1 -907 5261 4982 2909 136 36 11 chr2 220290352 220290876 -32965707 - L1MA3 LINE L1 0 6305 5769 11687 188 26 13 chr2 220290885 220292695 -32963888 - L1PA15 LINE L1 -21 6795 5010 180 0 0 0 chr2 220292695 220292715 -32963868 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 11687 188 26 13 chr2 220292715 220294476 -32962107 - L1PA15 LINE L1 -1806 5010 3179 3507 186 3 16 chr2 220294474 220295287 -32961296 - L1PA15 LINE L1 -4355 2442 1626 * 590 118 0 0 chr2 220295295 220295380 -32961203 + L1M1 LINE L1 5433 5517 -788 260 105 0 0 chr2 220295373 220295411 -32961172 - L1MA3 LINE L1 -832 5473 5436 * 1519 280 50 72 chr2 220295409 220296027 -32960556 - L1PA15 LINE L1 -5163 1624 586 1326 284 19 3 chr2 220296019 220296336 -32960247 - L1PA15 LINE L1 -6465 322 1 * 2890 138 16 58 chr2 220296343 220297000 -32959583 - L1M1 LINE L1 -524 5781 5154 2890 226 58 59 chr2 220297002 220298469 -32958114 - L1M4c LINE L1 -2883 3499 2024 21 0 0 0 chr2 220298470 220298491 -32958092 + AT_rich Low_complexity Low_complexity 1 21 0 877 227 204 52 chr2 220298510 220298854 -32957729 - MSTD LTR MaLR 0 396 1 2458 243 68 20 chr2 220298870 220299299 -32957284 - L1M4c LINE L1 -4512 1872 1394 2121 158 14 3 chr2 220299299 220299659 -32956924 + MER47A DNA MER2_type 3 366 0 2458 243 68 20 chr2 220299659 220299934 -32956649 - L1M4c LINE L1 -4990 1394 1134 2420 93 0 0 chr2 220299934 220300244 -32956339 - AluSg SINE Alu 0 310 1 772 269 51 27 chr2 220300245 220300544 -32956039 - L1 LINE L1 -4894 1237 916 591 261 67 10 chr2 220301319 220301514 -32955069 - L1 LINE L1 -5934 207 2 346 305 53 15 chr2 220302471 220302602 -32953981 + MER5A DNA MER1_type 1 136 -53 7156 110 8 16 chr2 220303192 220304258 -32952325 - MER11C LTR ERVK -14 1057 1 8172 57 1 0 chr2 220304258 220305254 -32951329 - HERVK11 LTR ERVK 0 7953 6957 3588 63 22 4 chr2 220305237 220305694 -32950889 - HERVK11 LTR ERVK -1184 6769 6305 * 266 24 73 24 chr2 220305692 220305733 -32950850 - HERVK11 LTR ERVK -7910 43 1 * 6891 136 5 17 chr2 220305733 220306817 -32949766 - MER11C LTR ERVK 0 1071 1 237 233 181 35 chr2 220307089 220307205 -32949378 + L2 LINE L2 3138 3270 -2 7150 45 26 6 chr2 220309020 220309899 -32946684 + MER11D LTR ERVK 1 897 0 894 71 94 0 chr2 220311074 220311201 -32945382 + MER85 DNA T2_type 1 139 0 247 250 263 19 chr2 220313731 220313887 -32942696 + MIR SINE MIR 34 227 -35 2138 92 41 7 chr2 220314607 220314899 -32941684 - AluSq SINE Alu -5 308 7 1124 150 129 63 chr2 220315881 220316168 -32940415 - L1MB4 LINE L1 -260 5920 5615 31 58 0 0 chr2 220316341 220316393 -32940190 + AT_rich Low_complexity Low_complexity 1 52 0 2355 116 0 0 chr2 220316837 220317147 -32939436 - AluSq SINE Alu -2 311 2 2229 98 10 0 chr2 220320622 220320917 -32935666 - AluSp SINE Alu -15 298 1 269 256 128 24 chr2 220321046 220321210 -32935373 - L1MC4a LINE L1 -1883 5925 5745 265 316 36 22 chr2 220321243 220321382 -32935201 + L1ME LINE L1 6 146 -5924 186 43 0 0 chr2 220322733 220322756 -32933827 + (TATG)n Simple_repeat Simple_repeat 4 26 0 37 76 0 0 chr2 220323582 220323661 -32932922 + AT_rich Low_complexity Low_complexity 1 79 0 30 27 0 0 chr2 220324303 220324340 -32932243 + AT_rich Low_complexity Low_complexity 1 37 0 28501 99 30 9 chr2 220324633 220330198 -32926385 + L1PA7 LINE L1 766 6468 -1 411 222 156 75 chr2 220330231 220330443 -32926140 - MIR SINE MIR 0 262 34 2003 158 30 7 chr2 220330515 220330919 -32925664 + L1MB4 LINE L1 5765 6177 -3 399 41 0 0 chr2 220332926 220332975 -32923608 + (CA)n Simple_repeat Simple_repeat 1 49 0 268 310 40 30 chr2 220334145 220334245 -32922338 + MIR SINE MIR 33 133 -75 546 283 57 4 chr2 220336298 220336545 -32920038 - HAL1 LINE L1 -4 2503 2244 1331 272 83 13 chr2 220336545 220337015 -32919568 + MLT1J LTR MaLR 1 503 -8 533 336 124 30 chr2 220337033 220337467 -32919116 - L2 LINE L2 -475 2839 2365 22 0 0 0 chr2 220337883 220337905 -32918678 + AT_rich Low_complexity Low_complexity 1 22 0 670 186 0 0 chr2 220337943 220338083 -32918500 + L1 LINE L1 4927 5066 -1080 705 244 56 0 chr2 220338143 220338340 -32918243 - MER3 DNA MER1_type -1 208 1 333 0 0 0 chr2 220338451 220338488 -32918095 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 234 333 0 0 chr2 220339722 220339785 -32916798 - L2 LINE L2 -29 3243 3181 542 261 49 7 chr2 220341763 220341905 -32914678 + MIR SINE MIR 10 157 -105 1155 123 18 0 chr2 220341920 220342090 -32914493 - AluSq SINE Alu -6 307 135 261 284 0 0 chr2 220342091 220342158 -32914425 + MIR SINE MIR 166 232 -30 14051 142 52 15 chr2 220343121 220343398 -32913185 + Tigger2 DNA MER2_type 1 266 -2452 2780 23 0 0 chr2 220343398 220343705 -32912878 + AluYb8 SINE Alu 1 307 -11 14051 142 52 15 chr2 220343705 220345064 -32911519 + Tigger2 DNA MER2_type 266 1773 -945 1430 209 117 15 chr2 220345064 220345466 -32911117 + LTR47B LTR ERVL 1 443 0 14051 142 52 15 chr2 220345466 220346448 -32910135 + Tigger2 DNA MER2_type 1773 2717 -1 1108 226 41 79 chr2 220347163 220347644 -32908939 + MLT1J LTR MaLR 5 501 -10 1195 159 64 0 chr2 220349168 220349388 -32907195 - MER46A DNA MER2_type -2 234 1 317 293 52 35 chr2 220349444 220349560 -32907023 + MER5A DNA MER1_type 6 123 -66 209 301 136 0 chr2 220349475 220349578 -32907005 - MER5A DNA MER1_type -22 167 51 * 2364 103 0 0 chr2 220349756 220350058 -32906525 - AluSc SINE Alu -7 302 1 249 242 32 0 chr2 220351331 220351393 -32905190 + L2 LINE L2 3207 3270 -2 286 273 45 68 chr2 220351406 220351538 -32905045 + MIR SINE MIR 73 201 -61 2213 99 3 10 chr2 220351807 220352125 -32904458 + AluSp SINE Alu 1 313 0 1858 132 3 35 chr2 220353147 220353436 -32903147 + AluSx SINE Alu 1 280 -32 228 100 0 0 chr2 220353436 220353476 -32903107 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 1768 163 20 13 chr2 220354046 220354346 -32902237 - AluJo SINE Alu -10 302 1 239 267 117 25 chr2 220356073 220356193 -32900390 - L3b LINE CR1 -135 1448 1318 429 246 90 107 chr2 220356681 220357196 -32899387 - L1M3 LINE L1 -372 5799 5276 461 345 100 7 chr2 220357225 220357515 -32899068 - L1M3 LINE L1 -876 5270 4954 369 159 23 11 chr2 220357607 220357695 -32898888 + CT-rich Low_complexity Low_complexity 4 92 0 1510 168 62 24 chr2 220357769 220358036 -32898547 - MLT1B LTR MaLR 0 390 104 2100 77 4 0 chr2 220358036 220358297 -32898286 - AluSx SINE Alu -5 307 46 1510 168 62 24 chr2 220358297 220358399 -32898184 - MLT1B LTR MaLR -286 104 7 373 301 129 0 chr2 220358961 220359124 -32897459 - MLT1J LTR MaLR -312 199 16 183 162 0 0 chr2 220359365 220359402 -32897181 + (CA)n Simple_repeat Simple_repeat 2 38 0 183 211 452 10 chr2 220360894 220360998 -32895585 - MER5A DNA MER1_type 0 189 40 1779 126 39 3 chr2 220361020 220361306 -32895277 - AluSx SINE Alu -12 300 5 330 26 0 0 chr2 220361371 220361410 -32895173 + (GA)n Simple_repeat Simple_repeat 1 39 0 267 289 232 24 chr2 220361589 220361835 -32894748 - L3b LINE CR1 -118 1465 1169 361 306 88 37 chr2 220362018 220362234 -32894349 - MIR SINE MIR -21 241 15 203 286 0 0 chr2 220362594 220362650 -32893933 + (TTTA)n Simple_repeat Simple_repeat 3 58 0 431 299 84 43 chr2 220362824 220363153 -32893430 - L2 LINE L2 -192 3080 2737 3125 133 20 2 chr2 220363153 220363641 -32892942 + LOR1a LTR ERV1 1 497 0 2444 76 0 13 chr2 220363660 220363975 -32892608 + AluY SINE Alu 1 311 0 2316 208 49 95 chr2 220363985 220364772 -32891811 - L1ME1 LINE L1 -10 6156 5334 222 118 0 0 chr2 220364772 220364806 -32891777 + (TATATG)n Simple_repeat Simple_repeat 3 36 0 * 486 88 0 0 chr2 220364805 220364873 -32891710 + (CA)n Simple_repeat Simple_repeat 2 69 0 2316 208 49 95 chr2 220364806 220365094 -32891489 - L1ME1 LINE L1 -832 5334 5167 499 261 27 43 chr2 220365196 220365229 -32891354 + LTR16A LTR ERVL 260 292 -158 2218 116 3 0 chr2 220365229 220365523 -32891060 - AluSp SINE Alu -18 295 1 499 261 27 43 chr2 220365523 220365677 -32890906 + LTR16A LTR ERVL 292 444 -6 207 0 0 0 chr2 220365696 220365719 -32890864 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 26 30 0 0 chr2 220367568 220367601 -32888982 + AT_rich Low_complexity Low_complexity 1 33 0 397 101 25 0 chr2 220368458 220368470 -32888113 + GA-rich Low_complexity Low_complexity 3 13 -70 2263 42 0 0 chr2 220368470 220368729 -32887854 + AluY SINE Alu 41 299 -12 397 101 25 0 chr2 220368729 220368795 -32887788 + GA-rich Low_complexity Low_complexity 13 83 0 2280 89 20 3 chr2 220370022 220370324 -32886259 - AluSc SINE Alu 0 309 3 1804 204 48 13 chr2 220371418 220371893 -32884690 - Charlie4a DNA MER1_type 0 508 17 545 250 147 6 chr2 220373631 220373787 -32882796 + MER5B DNA MER1_type 1 178 0 427 236 21 28 chr2 220374105 220374249 -32882334 - MER96B DNA MER1_type? -55 362 220 219 88 0 0 chr2 220374564 220374598 -32881985 + (TG)n Simple_repeat Simple_repeat 1 34 0 248 228 0 13 chr2 220374625 220374704 -32881879 + CT-rich Low_complexity Low_complexity 4 81 0 475 282 53 0 chr2 220375235 220375366 -32881217 - L2 LINE L2 -463 2851 2714 528 242 175 28 chr2 220375401 220375653 -32880930 + L2 LINE L2 2883 3171 -142 5098 127 27 20 chr2 220376100 220376595 -32879988 - L1PA16 LINE L1 0 6166 5661 300 53 0 0 chr2 220376595 220376633 -32879950 + (TA)n Simple_repeat Simple_repeat 2 39 0 5098 127 27 20 chr2 220376633 220376990 -32879593 - L1PA16 LINE L1 -505 5661 5308 1563 194 16 24 chr2 220376990 220377371 -32879212 - L1 LINE L1 -1622 4524 4147 7053 195 8 10 chr2 220377376 220378609 -32877974 - L1PA15-16 LINE L1 -5592 1257 24 2044 130 52 33 chr2 220378609 220378977 -32877606 - THE1C LTR MaLR 0 375 1 10682 106 6 30 chr2 220378979 220380596 -32875987 - THE1C-int LTR MaLR -2 1578 1 1964 146 64 14 chr2 220380596 220380953 -32875630 - THE1C LTR MaLR 0 375 1 7053 195 8 10 chr2 220380953 220381066 -32875517 - L1PA15-16 LINE L1 -6824 25 3 289 86 35 0 chr2 220381081 220381139 -32875444 + (TA)n Simple_repeat Simple_repeat 1 60 0 301 286 8 34 chr2 220381150 220381269 -32875314 - L1MC4 LINE L1 -1323 6719 6604 419 322 22 33 chr2 220381589 220381769 -32874814 - MER5B DNA MER1_type 0 178 1 937 261 23 0 chr2 220383081 220383299 -32873284 - MIR SINE MIR -2 260 38 613 63 0 0 chr2 220383952 220384031 -32872552 - MADE1 DNA Mariner -1 79 1 42945 44 5 2 chr2 220384134 220390258 -32866325 + L1PA4 LINE L1 18 6154 -1 198 356 68 23 chr2 220390684 220390861 -32865722 + L2 LINE L2 2266 2450 -864 3416 128 8 2 chr2 220390917 220391433 -32865150 - L1PA16 LINE L1 -6 6160 5642 468 156 0 0 chr2 220391450 220391559 -32865024 + (TA)n Simple_repeat Simple_repeat 1 109 0 308 279 0 23 chr2 220391563 220391649 -32864934 + L1MC4 LINE L1 6618 6701 -1341 346 223 0 43 chr2 220391671 220391765 -32864818 + L1MC4 LINE L1 6614 6703 -1339 314 274 0 21 chr2 220391807 220391902 -32864681 + L1MC4 LINE L1 6614 6706 -1336 10100 210 16 25 chr2 220391910 220395005 -32861578 - L1P4 LINE L1 -529 5637 2555 208 321 253 17 chr2 220395051 220395531 -32861052 + L2 LINE L2 2474 3047 -225 1212 262 16 10 chr2 220397018 220397323 -32859260 + MLT1J LTR MaLR 13 319 -192 218 368 144 5 chr2 220397506 220397707 -32858876 + L2 LINE L2 2257 2485 -829 407 352 15 20 chr2 220398243 220398442 -32858141 + LTR67 LTR ERVL 5 202 -355 2329 252 23 38 chr2 220398879 220399011 -32857572 - L1ME1 LINE L1 -5 6161 6029 2039 69 4 0 chr2 220399011 220399273 -32857310 - L1PA8 LINE L1 -1 6171 5909 2329 252 23 38 chr2 220399273 220399913 -32856670 - L1ME1 LINE L1 -137 6029 5400 341 282 67 0 chr2 220400032 220400227 -32856356 - L1MDa LINE L1 -4779 1436 1229 1749 231 104 4 chr2 220400236 220400794 -32855789 - L1MDa LINE L1 -5224 1172 559 447 206 140 0 chr2 220400804 220400911 -32855672 - L1MDa LINE L1 -5894 502 381 * 638 159 35 7 chr2 220400903 220401048 -32855535 - L1ME1 LINE L1 -865 5281 5133 492 348 30 6 chr2 220401728 220401892 -32854691 + MIR3 SINE MIR 10 177 -31 1824 154 42 18 chr2 220402109 220402446 -32854137 - L1PB4 LINE L1 -56 6100 5756 429 292 9 9 chr2 220403065 220403178 -32853405 - L2 LINE L2 -4 3309 3197 207 352 94 31 chr2 220404157 220404285 -32852298 - L2 LINE L2 0 3272 3137 291 54 0 0 chr2 220404520 220404557 -32852026 + (GA)n Simple_repeat Simple_repeat 1 37 0 264 224 15 0 chr2 220404557 220404624 -32851959 + GA-rich Low_complexity Low_complexity 4 71 0 2573 72 0 0 chr2 220404773 220405107 -32851476 + L1PA7 LINE L1 5820 6153 -1 453 342 79 5 chr2 220405124 220405314 -32851269 + MIR SINE MIR 41 244 -18 363 68 68 0 chr2 220405689 220405748 -32850835 - MADE1 DNA Mariner 0 80 18 202 216 0 0 chr2 220406078 220406115 -32850468 - MIR3 SINE MIR -21 187 151 272 306 47 0 chr2 220406252 220406337 -32850246 + L2 LINE L2 3002 3090 -182 189 0 0 0 chr2 220407528 220407549 -32849034 + (T)n Simple_repeat Simple_repeat 1 21 0 288 237 118 30 chr2 220409241 220409376 -32847207 - MIR SINE MIR -49 213 67 257 245 80 86 chr2 220409493 220409656 -32846927 + MER5A DNA MER1_type 28 189 0 901 244 9 23 chr2 220412059 220412276 -32844307 - MIR SINE MIR -28 234 21 195 100 0 0 chr2 220414523 220414553 -32842030 + (T)n Simple_repeat Simple_repeat 1 30 0 388 289 79 0 chr2 220414664 220414778 -32841805 - MIR SINE MIR -93 169 47 2508 39 0 20 chr2 220415034 220415339 -32841244 - AluY SINE Alu -12 299 1 25 65 0 0 chr2 220417155 220417201 -32839382 + AT_rich Low_complexity Low_complexity 1 46 0 21 0 0 0 chr2 220417449 220417470 -32839113 + AT_rich Low_complexity Low_complexity 1 21 0 562 325 47 0 chr2 220417797 220417988 -32838595 + MIR SINE MIR 63 262 0 24 0 0 0 chr2 220418137 220418161 -32838422 + AT_rich Low_complexity Low_complexity 1 24 0 273 280 37 77 chr2 220419093 220419286 -32837297 - L1ME LINE L1 -423 5698 5522 422 236 91 9 chr2 220419328 220419438 -32837145 - MIR SINE MIR -74 188 70 915 319 124 47 chr2 220420641 220421595 -32834988 + L2 LINE L2 774 1869 -1445 437 280 32 17 chr2 220421612 220421881 -32834702 - LTR16A1 LTR ERVL -142 315 1 511 318 162 30 chr2 220421910 220422276 -32834307 + L2 LINE L2 2662 3068 -245 240 282 214 23 chr2 220422414 220422545 -32834038 + L2 LINE L2 3158 3313 0 198 295 16 0 chr2 220423068 220423153 -32833430 - MIR SINE MIR -59 149 64 22 0 0 0 chr2 220423219 220423241 -32833342 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 220424371 220424393 -32832190 + AT_rich Low_complexity Low_complexity 1 22 0 238 327 77 19 chr2 220424833 220424937 -32831646 + L2 LINE L2 3159 3268 -4 21 36 0 0 chr2 220426135 220426163 -32830420 + AT_rich Low_complexity Low_complexity 1 28 0 252 185 0 0 chr2 220427354 220427408 -32829175 + CT-rich Low_complexity Low_complexity 1 54 0 190 361 33 0 chr2 220428392 220428453 -32828130 + MIR3 SINE MIR 124 186 -22 555 264 63 13 chr2 220429100 220429259 -32827324 + MIR SINE MIR 20 186 -76 22 0 0 0 chr2 220429523 220429545 -32827038 + AT_rich Low_complexity Low_complexity 1 22 0 244 296 49 0 chr2 220430183 220430264 -32826319 - L3 LINE CR1 -1210 367 283 288 302 116 11 chr2 220431578 220431767 -32824816 + L1ME LINE L1 5386 5594 -527 231 266 21 11 chr2 220431803 220431897 -32824686 + L1ME LINE L1 5793 5887 -234 247 266 0 46 chr2 220432758 220432867 -32823716 - L1MC4 LINE L1 -1324 6718 6615 251 303 0 0 chr2 220432880 220432969 -32823614 + L1MC4 LINE L1 6614 6702 -1340 183 80 0 0 chr2 220432970 220432995 -32823588 + (TA)n Simple_repeat Simple_repeat 1 25 0 870 38 0 0 chr2 220433366 220433472 -32823111 + L1HS LINE L1 6050 6155 0 279 0 0 0 chr2 220433550 220433581 -32823002 + (CA)n Simple_repeat Simple_repeat 2 32 0 22 56 0 0 chr2 220434575 220434611 -32821972 + AT_rich Low_complexity Low_complexity 1 36 0 245 257 0 27 chr2 220436652 220436726 -32819857 + GA-rich Low_complexity Low_complexity 5 76 0 210 71 0 0 chr2 220436741 220436769 -32819814 + (GA)n Simple_repeat Simple_repeat 1 28 0 327 253 96 55 chr2 220438382 220438528 -32818055 + MIR SINE MIR 1 143 -65 186 43 0 0 chr2 220438930 220438953 -32817630 + (TTCA)n Simple_repeat Simple_repeat 2 24 0 311 254 14 0 chr2 220439905 220439976 -32816607 + MER96 DNA MER1_type? 6 77 -98 187 111 0 0 chr2 220442228 220442255 -32814328 + L3 LINE CR1 967 993 -584 2512 30 0 3 chr2 220443094 220443389 -32813194 - AluY SINE Alu -17 294 1 2020 119 11 11 chr2 220443424 220443755 -32812828 + AluSx SINE Alu 1 331 0 23 33 0 0 chr2 220443993 220444023 -32812560 + AT_rich Low_complexity Low_complexity 1 30 0 461 329 156 11 chr2 220444580 220444933 -32811650 - LTR16A LTR ERVL -9 441 38 446 258 99 17 chr2 220445320 220445497 -32811086 + MIR SINE MIR 6 192 -62 756 280 62 14 chr2 220447787 220448062 -32808521 - L2 LINE L2 -12 3301 3014 21 36 0 0 chr2 220448108 220448136 -32808447 + AT_rich Low_complexity Low_complexity 1 28 0 246 213 62 62 chr2 220448324 220448404 -32808179 + L2 LINE L2 3193 3272 0 184 310 121 0 chr2 220449542 220449600 -32806983 + MER5B DNA MER1_type 23 87 -91 28 0 0 0 chr2 220449846 220449874 -32806709 + AT_rich Low_complexity Low_complexity 1 28 0 206 219 0 0 chr2 220450061 220450102 -32806481 + (CA)n Simple_repeat Simple_repeat 2 42 0 528 16 0 0 chr2 220450569 220450630 -32805953 + (TG)n Simple_repeat Simple_repeat 2 62 0 619 226 101 59 chr2 220450759 220451194 -32805389 - L1MC5 LINE L1 -70 7891 7326 180 237 26 0 chr2 220451545 220451583 -32805000 + MIR3 SINE MIR 149 187 -21 538 320 0 0 chr2 220452793 220452921 -32803662 + MIR3 SINE MIR 33 160 -48 21 0 0 0 chr2 220453124 220453145 -32803438 + AT_rich Low_complexity Low_complexity 1 21 0 243 0 0 0 chr2 220454230 220454257 -32802326 + (CA)n Simple_repeat Simple_repeat 1 27 0 23 0 0 0 chr2 220454451 220454474 -32802109 + AT_rich Low_complexity Low_complexity 1 23 0 320 268 102 31 chr2 220454478 220454605 -32801978 - L1ME1 LINE L1 -5 6161 6026 337 299 0 10 chr2 220456576 220456673 -32799910 + MIR SINE MIR 40 135 -73 2217 88 0 16 chr2 220456822 220457127 -32799456 - AluSq SINE Alu -13 300 1 205 306 14 14 chr2 220457685 220457757 -32798826 - MIR3 SINE MIR -10 198 127 193 175 25 0 chr2 220458036 220458076 -32798507 - L2 LINE L2 -9 3304 3264 225 0 0 0 chr2 220458523 220458548 -32798035 + (TG)n Simple_repeat Simple_repeat 1 25 0 2122 112 14 3 chr2 220459293 220459589 -32796994 + AluSx SINE Alu 1 299 -13 277 373 12 84 chr2 220462045 220462391 -32794192 - L2 LINE L2 -86 3186 2866 295 292 108 31 chr2 220463348 220463478 -32793105 - MIR SINE MIR -117 145 6 331 273 68 38 chr2 220463820 220463952 -32792631 + L2 LINE L2 3178 3313 0 23 33 0 0 chr2 220464058 220464088 -32792495 + AT_rich Low_complexity Low_complexity 1 30 0 615 307 82 12 chr2 220464113 220464357 -32792226 - MIR SINE MIR 0 262 2 1089 299 113 11 chr2 220467608 220468043 -32788540 + LTR16C LTR ERVL 2 480 -11 1218 209 53 30 chr2 220468365 220468666 -32787917 - AluJo SINE Alu -4 308 1 246 0 0 0 chr2 220469722 220469806 -32786777 + L1PA4 LINE L1 6112 6195 0 992 131 45 0 chr2 220470743 220470919 -32785664 - L1MA4 LINE L1 -11 6289 6106 29 0 0 0 chr2 220471323 220471352 -32785231 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr2 220472605 220472629 -32783954 + AT_rich Low_complexity Low_complexity 1 24 0 337 206 14 0 chr2 220473109 220473182 -32783401 - MER53 DNA DNA -112 77 4 252 262 0 12 chr2 220473868 220473952 -32782631 + (TA)n Simple_repeat Simple_repeat 1 83 0 200 254 102 0 chr2 220474449 220474508 -32782075 + MIR SINE MIR 87 151 -57 453 371 72 0 chr2 220476033 220476200 -32780383 + MIR SINE MIR 20 198 -64 228 200 0 0 chr2 220476536 220476586 -32779997 + (CATA)n Simple_repeat Simple_repeat 1 50 0 293 22 0 43 chr2 220476803 220476849 -32779734 - L1PA14 LINE L1 0 6161 6118 * 3857 223 14 7 chr2 220476842 220477687 -32778896 + L1P LINE L1 1898 2748 -3398 21 36 0 0 chr2 220477704 220477732 -32778851 + AT_rich Low_complexity Low_complexity 1 28 0 359 261 97 51 chr2 220477809 220477985 -32778598 - L3 LINE CR1 -97 1480 1297 28 48 0 0 chr2 220479809 220479851 -32776732 + AT_rich Low_complexity Low_complexity 1 42 0 300 217 132 9 chr2 220481744 220481850 -32774733 + L2 LINE L2 3193 3311 -2 180 0 0 0 chr2 220482631 220482651 -32773932 + (TAAAAA)n Simple_repeat Simple_repeat 2 21 0 280 403 48 31 chr2 220484365 220484784 -32771799 - L2 LINE L2 -939 2375 1950 248 300 174 18 chr2 220486304 220486488 -32770095 + MIR3 SINE MIR 1 205 -3 382 242 11 11 chr2 220487699 220487794 -32768789 + MIR3 SINE MIR 100 194 -14 432 284 111 19 chr2 220488046 220488208 -32768375 + MIR SINE MIR 4 180 -82 544 207 9 0 chr2 220489368 220489479 -32767104 + AluJb SINE Alu 183 294 -18 205 156 0 0 chr2 220491813 220491845 -32764738 + (TG)n Simple_repeat Simple_repeat 1 32 0 24 0 0 0 chr2 220492288 220492312 -32764271 + AT_rich Low_complexity Low_complexity 1 24 0 3071 62 0 0 chr2 220492991 220493379 -32763204 - L1PA7 LINE L1 -378 5776 5389 2966 55 0 10 chr2 220493379 220493764 -32762819 + L1PA7 LINE L1 5774 6154 0 22 80 0 0 chr2 220495577 220495627 -32760956 + AT_rich Low_complexity Low_complexity 1 50 0 1672 48 5 0 chr2 220498602 220498809 -32757774 + L1PA7 LINE L1 5947 6154 0 2441 155 14 23 chr2 220499162 220499594 -32756989 - MSTA LTR MaLR 0 428 1 606 293 130 0 chr2 220500567 220500775 -32755808 - MIR SINE MIR 0 262 28 352 282 17 22 chr2 220500931 220501112 -32755471 + (TA)n Simple_repeat Simple_repeat 1 180 0 203 298 0 0 chr2 220503800 220503857 -32752726 - L2 LINE L2 -1 3312 3256 222 281 0 0 chr2 220503912 220503969 -32752614 - L2 LINE L2 -1 3312 3256 205 326 102 43 chr2 220504127 220504314 -32752269 - MIR SINE MIR -45 217 20 227 317 64 1 chr2 220505605 220505732 -32750851 - MIR SINE MIR -62 146 32 195 204 0 0 chr2 220506536 220506580 -32750003 + CT-rich Low_complexity Low_complexity 6 49 0 1890 121 0 0 chr2 220507270 220507526 -32749057 + AluSg SINE Alu 38 293 -17 2567 30 0 3 chr2 220508027 220508328 -32748255 - AluY SINE Alu -11 300 1 2288 63 0 69 chr2 220508482 220508816 -32747767 + AluY SINE Alu 1 311 0 210 267 17 0 chr2 220512062 220512122 -32744461 + T-rich Low_complexity Low_complexity 5 65 0 2421 64 0 0 chr2 220512863 220513158 -32743425 + AluY SINE Alu 2 296 -15 1994 126 14 3 chr2 220513662 220513956 -32742627 - AluSg SINE Alu -13 297 1 852 209 24 29 chr2 220514139 220514349 -32742234 + MER3 DNA MER1_type 1 209 0 50 65 0 0 chr2 220515074 220515166 -32741417 + AT_rich Low_complexity Low_complexity 1 92 0 334 314 8 48 chr2 220515168 220515292 -32741291 - L2 LINE L2 -1 3312 3194 2881 3 0 0 chr2 220518044 220518358 -32738225 + AluYb8 SINE Alu 1 314 -4 387 294 114 9 chr2 220518825 220519009 -32737574 - MIR3 SINE MIR -55 207 5 930 203 60 115 chr2 220519587 220519845 -32736738 - MSTD LTR MaLR 0 396 168 1655 187 0 14 chr2 220519845 220520128 -32736455 - AluJb SINE Alu -22 290 12 930 203 60 115 chr2 220520128 220520288 -32736295 - MSTD LTR MaLR -228 168 1 244 254 0 0 chr2 220520709 220520764 -32735819 - MIR3 SINE MIR -9 199 145 203 194 0 0 chr2 220521381 220521417 -32735166 + A-rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chr2 220522019 220522049 -32734534 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 220522723 220522744 -32733839 + AT_rich Low_complexity Low_complexity 1 21 0 1633 123 53 4 chr2 220524226 220524469 -32732114 + AluSx SINE Alu 1 255 -57 422 263 35 9 chr2 220524494 220524608 -32731975 + MIR SINE MIR 72 188 -74 22 56 0 0 chr2 220525025 220525061 -32731522 + AT_rich Low_complexity Low_complexity 1 36 0 606 140 26 0 chr2 220528221 220528335 -32728248 + L1MA7 LINE L1 6172 6288 -3 1000 321 102 34 chr2 220530541 220531732 -32724851 - L2 LINE L2 -18 3254 1962 231 287 21 21 chr2 220531776 220531870 -32724713 - L2 LINE L2 -213 3059 2966 645 298 108 36 chr2 220533615 220533920 -32722663 - L3 LINE CR1 -1 1576 1250 243 342 19 82 chr2 220534110 220534268 -32722315 - L3 LINE CR1 -423 1154 1007 326 285 55 61 chr2 220534279 220534444 -32722139 - MIR SINE MIR -19 243 80 310 364 28 21 chr2 220534598 220534741 -32721842 + MIR SINE MIR 5 148 -114 841 213 27 0 chr2 220535563 220535746 -32720837 - MER5A DNA MER1_type 0 189 2 2375 61 7 0 chr2 220536024 220536321 -32720262 - AluY SINE Alu -12 299 1 1571 202 15 96 chr2 220537851 220538321 -32718262 - MSTB1 LTR MaLR 0 432 1 203 353 59 67 chr2 220538559 220538814 -32717769 - L2 LINE L2 -195 3077 2825 21 82 0 0 chr2 220540105 220540154 -32716429 + AT_rich Low_complexity Low_complexity 1 49 0 2039 103 3 38 chr2 220540617 220540908 -32715675 - AluSx SINE Alu -10 302 22 1949 103 86 14 chr2 220543037 220543328 -32713255 - AluSp SINE Alu -1 312 1 10476 32 0 0 chr2 220544039 220546057 -32710526 - L1PA3 LINE L1 -1 6154 4137 288 77 0 0 chr2 220546780 220546819 -32709764 + (TG)n Simple_repeat Simple_repeat 2 40 0 22 0 0 0 chr2 220546869 220546891 -32709692 + AT_rich Low_complexity Low_complexity 1 22 0 1108 181 6 6 chr2 220550726 220550908 -32705675 - MER5A DNA MER1_type -6 183 2 273 298 116 17 chr2 220551366 220551547 -32705036 - L3b LINE CR1 -205 1378 1180 23 33 0 0 chr2 220552379 220552409 -32704174 + AT_rich Low_complexity Low_complexity 1 30 0 406 281 62 8 chr2 220552476 220552604 -32703979 - MIR SINE MIR -65 197 63 2357 78 16 13 chr2 220552907 220553216 -32703367 + AluSp SINE Alu 3 312 -1 24 53 0 0 chr2 220554176 220554214 -32702369 + AT_rich Low_complexity Low_complexity 1 38 0 831 132 31 0 chr2 220557299 220557428 -32699155 - AluSc SINE Alu 0 309 177 1789 74 0 4 chr2 220558448 220558677 -32697906 - AluSq SINE Alu -5 308 81 725 233 41 0 chr2 220558839 220559011 -32697572 - MIR SINE MIR -1 261 83 309 235 242 15 chr2 220559325 220559457 -32697126 - L1MC4 LINE L1 0 8042 7881 2432 63 0 7 chr2 220561785 220562087 -32694496 - AluY SINE Alu -11 300 1 207 303 15 30 chr2 220562663 220562729 -32693854 + L2 LINE L2 3201 3265 -48 554 328 94 29 chr2 220563480 220563915 -32692668 - L2 LINE L2 -213 3059 2599 214 122 49 0 chr2 220563916 220563957 -32692626 + GA-rich Low_complexity Low_complexity 2 44 0 824 279 50 8 chr2 220564223 220564463 -32692120 + MIR SINE MIR 13 262 0 232 209 0 0 chr2 220564476 220564519 -32692064 - L2 LINE L2 -988 2326 2284 330 273 207 7 chr2 220565102 220565252 -32691331 - MIR SINE MIR -2 260 81 2186 129 116 13 chr2 220565560 220565947 -32690636 - MSTA LTR MaLR -1 427 1 2024 269 63 4 chr2 220566139 220566649 -32689934 - MLT1H1 LTR MaLR 0 555 16 558 301 73 16 chr2 220567216 220567462 -32689121 + MIR SINE MIR 1 260 -2 380 235 0 0 chr2 220568846 220568914 -32687669 - L2 LINE L2 0 3313 3246 867 307 121 33 chr2 220569589 220570042 -32686541 - L2 LINE L2 0 3313 2821 385 366 46 82 chr2 220571359 220571914 -32684669 - L2 LINE L2 0 3272 2734 706 311 18 21 chr2 220572124 220572458 -32684125 - L1MC4a LINE L1 -1907 5901 5569 820 273 98 36 chr2 220572472 220572911 -32683672 - MLT1H LTR MaLR 0 549 84 956 286 80 40 chr2 220573443 220573919 -32682664 - LTR33 LTR ERVL 0 521 27 2891 228 83 41 chr2 220574104 220575338 -32681245 - L1ME3A LINE L1 -14 6156 4874 303 287 84 23 chr2 220575394 220575704 -32680879 - L1ME3A LINE L1 -1617 4529 4201 2628 187 68 25 chr2 220576148 220576864 -32679719 - L1MC3 LINE L1 -389 8207 7375 1669 174 19 49 chr2 220576888 220577255 -32679328 + MLT1B LTR MaLR 35 390 0 1028 210 48 16 chr2 220577255 220577503 -32679080 - L1MC3 LINE L1 -1954 6642 6387 811 219 31 22 chr2 220577492 220577716 -32678867 - L1MC3 LINE L1 -2274 4683 4458 * 1525 201 103 26 chr2 220577723 220578273 -32678310 - L1MC3 LINE L1 -4589 2368 1684 1148 306 88 19 chr2 220579360 220579827 -32676756 - LTR33 LTR ERVL -5 516 18 604 320 48 45 chr2 220580092 220580383 -32676200 - L2 LINE L2 -619 2695 2404 1412 321 99 29 chr2 220581144 220582146 -32674437 - L2 LINE L2 -927 2387 1316 1199 52 0 0 chr2 220582739 220582892 -32673691 - AluY SINE Alu -1 310 158 196 329 13 13 chr2 220583273 220583352 -32673231 - L2 LINE L2 -1435 1879 1801 247 361 112 24 chr2 220584315 220584677 -32671906 - L2 LINE L2 -2 3270 2835 247 263 59 17 chr2 220584743 220584861 -32671722 - MER103 DNA DNA -1 165 43 343 328 57 72 chr2 220584962 220585227 -32671356 - L2 LINE L2 -489 2825 2565 543 209 17 26 chr2 220585981 220586096 -32670487 + MER81 DNA DNA 1 114 0 184 208 113 0 chr2 220586110 220586163 -32670420 + L2 LINE L2 3240 3298 -15 1726 159 7 33 chr2 220586272 220586574 -32670009 - AluSx SINE Alu -18 294 1 398 300 33 8 chr2 220586580 220586700 -32669883 - MIR SINE MIR -120 142 20 1329 200 108 33 chr2 220588248 220588608 -32667975 - MSTD LTR MaLR -9 387 1 2343 159 104 92 chr2 220590179 220590827 -32665756 - L1MB8 LINE L1 -6 6172 5514 1624 179 3 42 chr2 220590827 220591139 -32665444 - AluJb SINE Alu -12 300 1 2343 159 104 92 chr2 220591139 220591163 -32665420 - L1MB8 LINE L1 -664 5514 5492 514 246 97 51 chr2 220591140 220591335 -32665248 - L1MC3 LINE L1 -5518 1341 1138 * 1062 181 77 39 chr2 220591328 220591638 -32664945 - L1MA8 LINE L1 -4 6287 5966 * 1346 228 9 19 chr2 220591635 220591960 -32664623 - L1MC3 LINE L1 -5715 1144 823 2179 285 85 13 chr2 220591964 220592599 -32663984 - L1MC3 LINE L1 -6169 690 10 2768 151 38 5 chr2 220592826 220593269 -32663314 - LTR32 LTR ERVL 0 471 14 1092 264 40 74 chr2 220593270 220593675 -32662908 - MLT1E LTR MaLR -84 509 119 513 215 37 0 chr2 220593678 220593785 -32662798 - MLT1E LTR MaLR -432 161 51 248 388 71 54 chr2 220595112 220595504 -32661079 + L2 LINE L2 2844 3242 -30 274 278 210 28 chr2 220595525 220595701 -32660882 + MIR SINE MIR 9 216 -46 303 273 190 0 chr2 220596351 220596472 -32660111 - MIR SINE MIR -35 227 84 471 295 69 29 chr2 220596539 220596712 -32659871 - MER5A DNA MER1_type -6 183 4 219 356 25 0 chr2 220598248 220598366 -32658217 + CT-rich Low_complexity Low_complexity 5 125 0 834 214 0 51 chr2 220598426 220598622 -32657961 - MER5A DNA MER1_type -2 187 2 187 231 0 58 chr2 220599152 220599204 -32657379 - L2 LINE L2 0 3313 3265 507 300 132 8 chr2 220599465 220599708 -32656875 + L2 LINE L2 1951 2223 -1091 424 111 28 0 chr2 220599853 220599925 -32656658 + L1PA16 LINE L1 6084 6157 -9 189 291 76 38 chr2 220600069 220600148 -32656435 + L2 LINE L2 3148 3229 -43 257 309 0 0 chr2 220600630 220600698 -32655885 - MLT1J LTR MaLR -200 311 244 2147 113 3 7 chr2 220602536 220602837 -32653746 - AluSc SINE Alu -9 300 1 275 348 17 8 chr2 220603863 220603981 -32652602 - MLT1K LTR MaLR -290 298 180 371 289 78 95 chr2 220604292 220604638 -32651945 + MLT1J LTR MaLR 2 341 -170 2506 207 57 10 chr2 220605253 220605833 -32650750 - L1MC3 LINE L1 0 7785 7179 266 313 0 0 chr2 220605834 220605914 -32650669 - MLT1F1 LTR MaLR -453 114 35 606 169 229 0 chr2 220605915 220606098 -32650485 - L1MC3 LINE L1 -689 7096 6872 1618 181 33 38 chr2 220606098 220606463 -32650120 + MLT1A2 LTR MaLR 1 363 -11 3179 200 13 47 chr2 220606506 220607251 -32649332 - L1MC3 LINE L1 -921 6864 6145 579 263 13 7 chr2 220607347 220607499 -32649084 - MER91B DNA MER1_type -1 189 37 592 260 33 11 chr2 220607963 220608144 -32648439 + Charlie8 DNA MER1_type 70 254 -2163 234 244 134 83 chr2 220608542 220608759 -32647824 - L3 LINE CR1 -771 806 579 250 376 67 0 chr2 220608759 220608908 -32647675 - L3 LINE CR1 -1185 392 234 35 41 0 0 chr2 220609663 220609712 -32646871 + AT_rich Low_complexity Low_complexity 1 49 0 261 0 0 0 chr2 220609746 220609775 -32646808 + (CA)n Simple_repeat Simple_repeat 2 30 0 * 273 29 0 0 chr2 220609774 220609808 -32646775 + (GA)n Simple_repeat Simple_repeat 2 35 0 22 56 0 0 chr2 220611404 220611440 -32645143 + AT_rich Low_complexity Low_complexity 1 36 0 1912 116 42 3 chr2 220611994 220612278 -32644305 + AluSg SINE Alu 1 295 -15 1123 228 75 19 chr2 220612827 220613147 -32643436 + MER46C DNA MER2_type 1 338 0 368 289 97 9 chr2 220613352 220613466 -32643117 - MIR SINE MIR -121 141 18 24 32 0 0 chr2 220613476 220613507 -32643076 + AT_rich Low_complexity Low_complexity 1 31 0 632 258 76 25 chr2 220613566 220613594 -32642989 - MIR SINE MIR -54 208 183 5057 83 10 24 chr2 220613594 220614292 -32642291 + LTR12 LTR ERV1 1 688 0 632 258 76 25 chr2 220614292 220614461 -32642122 - MIR SINE MIR -79 183 1 29 60 0 0 chr2 220614731 220614781 -32641802 + AT_rich Low_complexity Low_complexity 1 50 0 414 254 0 81 chr2 220614968 220615141 -32641442 - L1MC5 LINE L1 -52 7909 7751 1492 178 97 7 chr2 220616053 220616322 -32640261 - AluJo SINE Alu -18 294 2 21 0 0 0 chr2 220616459 220616480 -32640103 + AT_rich Low_complexity Low_complexity 1 21 0 1587 207 90 57 chr2 220616974 220617521 -32639062 - L1MC4 LINE L1 -1 8041 7477 1321 127 38 4 chr2 220617694 220617930 -32638653 + L1MA2 LINE L1 6061 6304 0 1659 224 62 4 chr2 220617969 220618424 -32638159 - L1MC4 LINE L1 -530 7512 7032 1149 158 31 0 chr2 220618450 220618646 -32637937 - L1MC1 LINE L1 -26 6307 6106 1627 186 44 6 chr2 220618669 220618987 -32637596 + LTR42 LTR ERVL 164 493 -2 894 188 21 42 chr2 220618989 220619228 -32637355 - L1M4 LINE L1 -2100 4544 4311 1031 192 62 79 chr2 220619365 220619484 -32637099 + MER2 DNA MER2_type 1 121 -224 2078 117 3 0 chr2 220619484 220619775 -32636808 - AluY SINE Alu -19 292 1 1031 192 62 79 chr2 220619775 220619946 -32636637 + MER2 DNA MER2_type 121 286 -59 1119 226 33 23 chr2 220619954 220620255 -32636328 - L1M4 LINE L1 -2292 4352 4049 531 337 58 50 chr2 220620330 220620793 -32635790 - HAL1b LINE L1 -697 651 185 1438 225 21 96 chr2 220621062 220621741 -32634842 - L1M4 LINE L1 -842 5304 4677 935 314 111 39 chr2 220621833 220622544 -32634039 - L1M4 LINE L1 -5773 769 8 1085 180 3 129 chr2 220623023 220623318 -32633265 - AluJo SINE Alu -46 266 9 408 189 158 47 chr2 220624933 220625060 -32631523 + Charlie8 DNA MER1_type 50 190 -2227 373 203 16 124 chr2 220625363 220625413 -32631170 - MLT1A2 LTR MaLR 0 489 435 4562 48 50 3 chr2 220625413 220625994 -32630589 + LTR14B LTR ERVK 1 608 0 373 203 16 124 chr2 220625994 220626068 -32630515 - MLT1A2 LTR MaLR -54 435 273 23 68 0 0 chr2 220626068 220626112 -32630471 + AT_rich Low_complexity Low_complexity 1 44 0 283 256 12 49 chr2 220626896 220626978 -32629605 - L2 LINE L2 -4 3309 3231 * 295 304 81 20 chr2 220626966 220627114 -32629469 + MIR SINE MIR 13 169 -93 2233 236 22 26 chr2 220627146 220627692 -32628891 - ERVL LTR ERVL -3975 1789 1246 1237 229 23 30 chr2 220627704 220628005 -32628578 - MLT2D LTR ERVL -115 299 1 422 306 129 53 chr2 220628074 220628414 -32628169 + MLT1K LTR MaLR 78 443 -145 840 203 11 5 chr2 220628632 220628819 -32627764 + MER97c DNA MER1_type? 60 247 -843 823 241 99 0 chr2 220628943 220629155 -32627428 - MER97a DNA MER1_type? -270 624 392 396 277 27 0 chr2 220629215 220629327 -32627256 + MER97b DNA MER1_type? 938 1052 -1 466 46 46 0 chr2 220629545 220629610 -32626973 + MER41A LTR ERV1 399 466 -88 277 47 0 70 chr2 220630167 220630210 -32626373 + MADE1 DNA Mariner 2 41 -39 386 319 51 79 chr2 220631315 220631930 -32624653 + L2 LINE L2 2639 3313 0 24 0 0 0 chr2 220632012 220632036 -32624547 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 220634168 220634189 -32622394 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 220634450 220634474 -32622109 + AT_rich Low_complexity Low_complexity 1 24 0 381 347 121 5 chr2 220636660 220636850 -32619733 + MIR SINE MIR 37 248 -14 1674 194 106 3 chr2 220636970 220637356 -32619227 - MSTB LTR MaLR 0 426 1 1565 138 77 30 chr2 220637361 220637659 -32618924 - MSTA-int LTR MaLR -6 1645 1334 21 0 0 0 chr2 220637659 220637680 -32618903 + AT_rich Low_complexity Low_complexity 1 21 0 7472 37 2 0 chr2 220637680 220639265 -32617318 - L1PA3 LINE L1 -3 6152 4567 15306 27 9 0 chr2 220639265 220641115 -32615468 + L1PA3 LINE L1 2681 4547 -1599 7866 175 12 3 chr2 220641113 220642447 -32614136 - MSTA-int LTR MaLR -305 1346 1 * 1993 181 58 15 chr2 220642447 220642857 -32613726 - MSTA LTR MaLR 0 428 1 1882 190 38 43 chr2 220642863 220643306 -32613277 - MER31B LTR ERV1 -25 441 1 671 239 34 34 chr2 220643351 220643527 -32613056 - MER45A DNA AcHobo 0 178 3 356 159 87 0 chr2 220643945 220644014 -32612569 - MLT1J2 LTR MaLR 0 450 376 267 143 24 0 chr2 220644441 220644483 -32612100 - MLT1K LTR MaLR -358 230 188 194 299 0 15 chr2 220644600 220644667 -32611916 - L2 LINE L2 -822 2492 2427 300 359 187 27 chr2 220644697 220645104 -32611479 - L2 LINE L2 -2578 736 265 181 362 64 11 chr2 220646120 220646214 -32610369 + MIR SINE MIR 17 115 -93 257 280 43 11 chr2 220646264 220646357 -32610226 + MIR3 SINE MIR 99 194 -14 198 71 0 0 chr2 220649102 220649130 -32607453 + (CAT)n Simple_repeat Simple_repeat 3 30 0 9528 104 6 2 chr2 220649392 220651589 -32604994 + L1PA8 LINE L1 3947 6152 -20 29 28 0 0 chr2 220651689 220651725 -32604858 + AT_rich Low_complexity Low_complexity 1 36 0 336 282 32 32 chr2 220651958 220652082 -32604501 + L2 LINE L2 3173 3296 -17 2094 93 61 0 chr2 220652232 220652512 -32604071 - AluSx SINE Alu -15 297 1 991 207 59 101 chr2 220652627 220652721 -32603862 + MER2 DNA MER2_type 2 98 -247 2844 48 0 0 chr2 220652721 220653072 -32603511 + L1PA4 LINE L1 5805 6155 0 991 207 59 101 chr2 220653072 220653335 -32603248 + MER2 DNA MER2_type 98 344 -1 298 162 27 14 chr2 220653360 220653434 -32603149 + (TATG)n Simple_repeat Simple_repeat 4 78 0 1420 100 43 2 chr2 220653874 220654219 -32602364 + MSTA LTR MaLR 1 426 -2 551 213 37 35 chr2 220654833 220655198 -32601385 - MSTC LTR MaLR 0 457 3 371 298 41 33 chr2 220656320 220656441 -32600142 + L2 LINE L2 3151 3272 0 315 343 102 19 chr2 220656643 220656859 -32599724 + MIR SINE MIR 15 248 -14 1635 292 113 9 chr2 220657714 220658283 -32598300 - MLT2E LTR ERVL 0 628 1 561 335 95 28 chr2 220658500 220659039 -32597544 - L2 LINE L2 -685 2629 1968 213 121 0 0 chr2 220661282 220661315 -32595268 + (TGAG)n Simple_repeat Simple_repeat 3 35 0 3026 181 133 74 chr2 220661338 220662203 -32594380 - MER21A LTR ERV1 -4 927 12 289 170 38 0 chr2 220662240 220662293 -32594290 - MER21A LTR ERV1 -857 74 20 405 0 0 0 chr2 220662294 220662339 -32594244 + (TCTA)n Simple_repeat Simple_repeat 1 45 0 277 155 24 95 chr2 220663193 220663277 -32593306 - L2 LINE L2 0 3313 3236 189 0 0 0 chr2 220664077 220664098 -32592485 + (T)n Simple_repeat Simple_repeat 1 21 0 22 0 0 0 chr2 220664944 220664966 -32591617 + AT_rich Low_complexity Low_complexity 1 22 0 30 83 0 0 chr2 220664997 220665069 -32591514 + AT_rich Low_complexity Low_complexity 1 72 0 511 249 94 15 chr2 220665243 220665444 -32591139 - L1ME3A LINE L1 -219 5951 5735 237 213 33 16 chr2 220665445 220665506 -32591077 + CT-rich Low_complexity Low_complexity 2 63 0 422 321 47 59 chr2 220665548 220665934 -32590649 - L1ME3A LINE L1 -538 5626 5262 2130 82 0 0 chr2 220666068 220666337 -32590246 - AluY SINE Alu -6 305 37 2180 109 3 0 chr2 220666442 220666760 -32589823 + AluSp SINE Alu 1 319 0 222 343 0 0 chr2 220666800 220666870 -32589713 + (TATATG)n Simple_repeat Simple_repeat 6 75 0 423 206 72 17 chr2 220667525 220667705 -32588878 - MER20B DNA MER1_type -11 772 583 518 303 179 14 chr2 220668341 220668688 -32587895 - MER20B DNA MER1_type -379 404 1 1491 231 122 15 chr2 220669216 220669822 -32586761 - MER69 DNA AcHobo -13 2513 1843 387 89 89 30 chr2 220670228 220670397 -32586186 + (TA)n Simple_repeat Simple_repeat 2 180 0 735 291 114 21 chr2 220670411 220670700 -32585883 - MER69 DNA AcHobo -2208 318 3 308 304 40 34 chr2 220671364 220671512 -32585071 + MIR SINE MIR 64 212 -50 306 321 83 9 chr2 220671852 220671961 -32584622 - L2 LINE L2 -8 3305 3189 220 342 53 26 chr2 220672378 220672492 -32584091 - L2 LINE L2 0 3313 3197 326 297 55 0 chr2 220674868 220674959 -32581624 - L2 LINE L2 -4 3309 3214 410 266 16 117 chr2 220675015 220675103 -32581480 - MIR SINE MIR -91 171 110 2410 40 17 13 chr2 220675103 220675404 -32581179 - AluY SINE Alu -9 302 1 410 266 16 117 chr2 220675404 220675503 -32581080 - MIR SINE MIR -152 110 3 24 32 0 0 chr2 220675535 220675566 -32581017 + AT_rich Low_complexity Low_complexity 1 31 0 406 288 129 0 chr2 220676722 220676861 -32579722 - MIR SINE MIR -26 236 80 618 227 16 0 chr2 220677090 220677218 -32579365 + MIR SINE MIR 82 211 -51 304 349 155 32 chr2 220677678 220678438 -32578145 + L2 LINE L2 1885 2738 -576 207 100 0 0 chr2 220679977 220680007 -32576576 + (T)n Simple_repeat Simple_repeat 1 30 0 228 272 160 41 chr2 220680666 220680797 -32575786 - MER5A DNA MER1_type 0 189 32 3522 117 0 16 chr2 220680797 220681344 -32575239 - L1PA15 LINE L1 -3 6162 5625 228 272 160 41 chr2 220681344 220681381 -32575202 - MER5A DNA MER1_type -157 32 1 275 280 43 0 chr2 220682092 220682185 -32574398 - MLT1J1 LTR MaLR -284 162 66 180 0 0 0 chr2 220682976 220682996 -32573587 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 379 343 96 6 chr2 220683282 220683460 -32573123 + MIR SINE MIR 20 213 -49 704 307 46 65 chr2 220683979 220684486 -32572097 - L2 LINE L2 0 3313 2784 378 296 87 39 chr2 220684846 220685052 -32571531 - L3b LINE CR1 -224 1359 1144 23 0 0 0 chr2 220685065 220685088 -32571495 + AT_rich Low_complexity Low_complexity 1 23 0 207 0 0 0 chr2 220686483 220686506 -32570077 + (A)n Simple_repeat Simple_repeat 1 23 0 3667 233 103 77 chr2 220687098 220688386 -32568197 - L1MCa LINE L1 -2924 3502 2249 1224 79 44 39 chr2 220688386 220688589 -32567994 - L1MA3 LINE L1 -1 6304 6101 3667 233 103 77 chr2 220688589 220689214 -32567369 - L1MCa LINE L1 -4177 2249 1642 2111 110 0 0 chr2 220689214 220689527 -32567056 - AluSq SINE Alu 0 313 1 3667 233 103 77 chr2 220689527 220691011 -32565572 - L1MCa LINE L1 -4784 1642 19 202 234 0 0 chr2 220691565 220691612 -32564971 + T-rich Low_complexity Low_complexity 1 47 0 201 200 0 22 chr2 220693015 220693060 -32563523 + (TATATG)n Simple_repeat Simple_repeat 5 48 0 21 36 0 0 chr2 220693394 220693422 -32563161 + AT_rich Low_complexity Low_complexity 1 28 0 378 290 148 22 chr2 220693428 220693611 -32562972 + MIR SINE MIR 56 261 -1 1996 117 30 30 chr2 220694583 220694883 -32561700 - AluSx SINE Alu -12 300 1 193 283 0 19 chr2 220695125 220695178 -32561405 - MIR SINE MIR -61 147 96 24 0 0 0 chr2 220695477 220695501 -32561082 + AT_rich Low_complexity Low_complexity 1 24 0 240 132 0 0 chr2 220695948 220695986 -32560597 - MLT2D LTR ERVL 0 414 377 282 294 18 0 chr2 220696001 220696110 -32560473 + (TA)n Simple_repeat Simple_repeat 2 112 0 1607 170 114 6 chr2 220696130 220696454 -32560129 - MLT2D LTR ERVL -55 359 1 912 295 45 35 chr2 220697184 220697581 -32559002 - MLT1I LTR MaLR -3 406 6 325 359 114 4 chr2 220697609 220697854 -32558729 - MLT1L LTR MaLR 0 615 344 338 326 83 15 chr2 220698587 220698719 -32557864 + MIR SINE MIR 12 152 -110 324 259 40 12 chr2 220698731 220698883 -32557700 - MLT1J1 LTR MaLR 0 446 240 5521 108 14 1 chr2 220699078 220699915 -32556668 + L1PA8 LINE L1 4335 5182 -964 4775 72 18 2 chr2 220699913 220700539 -32556044 + L1PA8 LINE L1 5461 6096 -76 * 21 0 0 0 chr2 220700607 220700628 -32555955 + AT_rich Low_complexity Low_complexity 1 21 0 314 283 3 14 chr2 220700737 220700822 -32555761 + MIR SINE MIR 76 160 -48 3284 82 13 2 chr2 220700859 220701308 -32555275 + L1PA10 LINE L1 5712 6165 -3 21 36 0 0 chr2 220702210 220702238 -32554345 + AT_rich Low_complexity Low_complexity 1 28 0 2233 267 87 9 chr2 220704725 220705509 -32551074 - L1ME3A LINE L1 -14 6156 5312 12098 214 56 32 chr2 220705580 220706455 -32550128 - L1PB3 LINE L1 0 7216 6363 585 116 21 11 chr2 220706455 220706574 -32550009 - AluSc SINE Alu 0 304 185 12098 214 56 32 chr2 220706574 220710392 -32546191 - L1PB3 LINE L1 -853 6363 2638 2080 104 0 39 chr2 220710392 220710700 -32545883 + AluY SINE Alu 1 296 -15 12098 214 56 32 chr2 220710700 220711304 -32545279 - L1PB3 LINE L1 -4578 2638 1696 1994 200 62 0 chr2 220711304 220711704 -32544879 - MSTB LTR MaLR 0 426 2 12098 214 56 32 chr2 220711704 220711884 -32544699 - L1PB3 LINE L1 -5520 1696 1522 343 254 86 41 chr2 220711907 220712151 -32544432 - L1ME3A LINE L1 -1572 4574 4320 2479 268 66 13 chr2 220712157 220713119 -32543464 - L1PB3 LINE L1 -5219 1990 1081 207 0 0 0 chr2 220713119 220713142 -32543441 + (TG)n Simple_repeat Simple_repeat 2 24 0 2479 268 66 13 chr2 220713142 220713250 -32543333 - L1PB3 LINE L1 -6128 1081 19 674 319 45 24 chr2 220713422 220713757 -32542826 - L1PA15-16 LINE L1 -6507 342 1 557 315 97 14 chr2 220713811 220714325 -32542258 - L1M4 LINE L1 -916 5816 5260 229 228 35 61 chr2 220714409 220714523 -32542060 - L1M4 LINE L1 -4789 1864 1754 28 48 0 0 chr2 220717363 220717405 -32539178 + AT_rich Low_complexity Low_complexity 1 42 0 4350 170 26 14 chr2 220717719 220718479 -32538104 + Tigger7 DNA MER2_type 2 770 -1717 1609 156 20 96 chr2 220718479 220718877 -32537706 + Tigger7 DNA MER2_type 2118 2485 -2 280 378 52 0 chr2 220719798 220719933 -32536650 - MIR SINE MIR -92 170 29 218 337 11 11 chr2 220720147 220720242 -32536341 + MIR SINE MIR 112 206 -56 428 283 0 9 chr2 220720587 220720693 -32535890 + MER5A DNA MER1_type 9 113 -76 374 333 122 63 chr2 220720998 220721633 -32534950 - L2 LINE L2 0 3313 2636 554 224 33 26 chr2 220721941 220722093 -32534490 + LTR33A LTR ERVL 371 523 0 651 299 126 28 chr2 220722146 220722464 -32534119 - L2 LINE L2 -912 2402 2054 1149 150 16 0 chr2 220722687 220722880 -32533703 - L1PA16 LINE L1 -17 6149 5954 323 327 67 13 chr2 220722919 220723069 -32533514 + MER91A DNA MER1_type 1 158 -38 2413 92 0 0 chr2 220723254 220723560 -32533023 - AluSp SINE Alu -7 306 1 272 389 91 17 chr2 220723565 220723740 -32532843 + MER5A DNA MER1_type 2 189 0 232 270 45 11 chr2 220725464 220725553 -32531030 - L1ME4a LINE L1 -50 6071 5980 191 146 24 0 chr2 220725587 220725628 -32530955 + (TATG)n Simple_repeat Simple_repeat 2 43 0 365 276 73 16 chr2 220725698 220725821 -32530762 - L2 LINE L2 -8 3305 3176 1106 186 7 71 chr2 220726301 220726596 -32529987 - L1MA4 LINE L1 -1 6299 6024 236 298 136 16 chr2 220727932 220728241 -32528342 - L1ME4a LINE L1 -165 5956 5611 204 67 0 0 chr2 220780595 220780625 -32475958 + (CA)n Simple_repeat Simple_repeat 1 30 0 359 312 152 38 chr2 220780625 220780968 -32475615 + L1ME2 LINE L1 96 477 -5593 334 292 64 50 chr2 220781263 220781482 -32475101 + L1ME2 LINE L1 707 928 -5142 * 392 293 69 9 chr2 220781459 220781575 -32475008 + L1ME2 LINE L1 2328 2450 -3630 797 230 37 37 chr2 220781708 220782008 -32474575 + L1ME2 LINE L1 2606 2905 -3175 863 249 76 42 chr2 220782051 220782131 -32474452 + L1ME2 LINE L1 4392 4468 -1612 2069 111 27 10 chr2 220782131 220782429 -32474154 + AluSx SINE Alu 1 303 -9 863 249 76 42 chr2 220782429 220782702 -32473881 + L1ME2 LINE L1 4468 4757 -1323 10719 44 6 80 chr2 220782714 220784243 -32472340 + SVA Other Other 1 1418 0 1543 260 53 20 chr2 220784243 220784319 -32472264 + L1ME2 LINE L1 5543 5615 -483 1577 139 57 92 chr2 220784319 220784708 -32471875 - THE1C LTR MaLR 0 375 1 1543 260 53 20 chr2 220784708 220785138 -32471445 + L1ME2 LINE L1 5615 6066 -32 732 343 88 33 chr2 220785486 220785851 -32470732 + LTR16C LTR ERVL 49 433 -58 21 36 0 0 chr2 220786734 220786762 -32469821 + AT_rich Low_complexity Low_complexity 1 28 0 315 279 76 76 chr2 220791798 220791956 -32464627 + MLT1J2 LTR MaLR 265 422 -28 250 364 18 9 chr2 220792054 220792164 -32464419 - MIR SINE MIR -71 137 27 2198 108 0 0 chr2 220792683 220792978 -32463605 - AluSq SINE Alu -18 295 1 25 51 0 0 chr2 220793666 220793705 -32462878 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr2 220793728 220793750 -32462833 + AT_rich Low_complexity Low_complexity 1 22 0 214 172 17 35 chr2 220794115 220794173 -32462410 + CT-rich Low_complexity Low_complexity 1 57 0 514 300 141 28 chr2 220795136 220795702 -32460881 - L1ME3 LINE L1 -236 5926 5297 652 282 167 29 chr2 220795723 220796489 -32460094 - L1ME3 LINE L1 -897 5249 4378 208 333 121 30 chr2 220798512 220798677 -32457906 - MIR SINE MIR -66 196 17 249 108 0 0 chr2 220798733 220798770 -32457813 + (TA)n Simple_repeat Simple_repeat 1 37 0 216 0 0 0 chr2 220798781 220798805 -32457778 + (TG)n Simple_repeat Simple_repeat 2 25 0 762 300 171 19 chr2 220799610 220800200 -32456383 - L2 LINE L2 -10 3303 2632 345 286 149 6 chr2 220801818 220801979 -32454604 + L2 LINE L2 3124 3307 -6 2115 129 3 0 chr2 220802095 220802406 -32454177 - AluSx SINE Alu 0 312 1 446 304 62 48 chr2 220802486 220802822 -32453761 + LTR16C LTR ERVL 151 491 0 25 0 0 0 chr2 220803445 220803470 -32453113 + AT_rich Low_complexity Low_complexity 1 25 0 264 194 21 97 chr2 220803523 220803616 -32452967 + MIR SINE MIR 173 258 -4 955 171 14 192 chr2 220803624 220804056 -32452527 + LTR49-int LTR ERV1 5813 6167 -164 1074 257 104 25 chr2 220804200 220804605 -32451978 + MER39 LTR ERV1 261 697 -10 29 0 0 0 chr2 220805293 220805322 -32451261 + AT_rich Low_complexity Low_complexity 1 29 0 372 267 161 0 chr2 220805404 220805621 -32450962 + L1ME4a LINE L1 5868 6119 -2 2708 153 30 2 chr2 220805634 220806130 -32450453 - L1MA8 LINE L1 -6 6285 5776 552 246 36 0 chr2 220806173 220806311 -32450272 + L1M2 LINE L1 5638 5780 -511 7633 29 3 0 chr2 220806666 220807700 -32448883 - L1PA4 LINE L1 0 6155 5121 24 32 0 0 chr2 220808463 220808494 -32448089 + AT_rich Low_complexity Low_complexity 1 31 0 731 272 143 8 chr2 220808986 220809511 -32447072 - L2 LINE L2 0 3313 2681 226 230 40 0 chr2 220809724 220809798 -32446785 - L1M4 LINE L1 -1536 4610 4534 21 0 0 0 chr2 220809887 220809908 -32446675 + AT_rich Low_complexity Low_complexity 1 21 0 2174 106 0 3 chr2 220810481 220810816 -32445767 - AluY SINE Alu 0 334 1 22 0 0 0 chr2 220811065 220811087 -32445496 + AT_rich Low_complexity Low_complexity 1 22 0 32261 113 20 29 chr2 220811383 220815810 -32440773 - L1PA7 LINE L1 0 6154 1801 14256 28 0 1 chr2 220815810 220818265 -32438318 - L1PA4 LINE L1 -4 6151 3698 32261 113 20 29 chr2 220818265 220820038 -32436545 - L1PA7 LINE L1 -4353 1801 13 466 284 103 7 chr2 220820325 220820480 -32436103 - MER5B DNA MER1_type -6 172 3 309 301 39 51 chr2 220820862 220821018 -32435565 - L2 LINE L2 -10 3303 3150 * 399 335 57 6 chr2 220820962 220821120 -32435463 + L2 LINE L2 1150 1315 -1999 2304 154 65 7 chr2 220821120 220821523 -32435060 + MSTA LTR MaLR 1 426 -2 4595 151 41 4 chr2 220821532 220822316 -32434267 + MSTA-int LTR MaLR 1 813 -838 1748 162 0 18 chr2 220822518 220822802 -32433781 - AluSx SINE Alu -33 279 1 2452 58 10 3 chr2 220822857 220823165 -32433418 + AluY SINE Alu 1 310 -1 326 219 62 62 chr2 220823633 220823729 -32432854 + MLT1J LTR MaLR 94 189 -322 23 0 0 0 chr2 220823962 220823985 -32432598 + AT_rich Low_complexity Low_complexity 1 23 0 31 58 0 0 chr2 220824388 220824440 -32432143 + AT_rich Low_complexity Low_complexity 1 52 0 510 308 131 14 chr2 220824605 220824826 -32431757 + MIR SINE MIR 2 248 -14 272 262 12 0 chr2 220825611 220825695 -32430888 - L1MEc LINE L1 -2828 3387 3303 * 352 305 0 23 chr2 220825692 220825823 -32430760 - L1MEc LINE L1 -3908 2488 2361 1748 261 44 19 chr2 220825833 220826474 -32430109 - L1MEc LINE L1 -2935 3280 2624 4356 269 76 32 chr2 220826550 220828658 -32427925 - L1MEc LINE L1 -3608 2607 393 1587 122 4 4 chr2 220828658 220828912 -32427671 + L1MA4A LINE L1 6045 6298 -5 4356 269 76 32 chr2 220828912 220829266 -32427317 - L1MEc LINE L1 -5822 393 56 23 0 0 0 chr2 220829667 220829690 -32426893 + AT_rich Low_complexity Low_complexity 1 23 0 5569 182 37 8 chr2 220831426 220832810 -32423773 - L1MC1 LINE L1 -5 6328 4901 225 380 151 23 chr2 220833094 220833692 -32422891 + L2 LINE L2 2070 2743 -571 42 57 0 0 chr2 220834292 220834362 -32422221 + AT_rich Low_complexity Low_complexity 1 70 0 1436 273 29 35 chr2 220834535 220835155 -32421428 + L1M4 LINE L1 2215 2830 -3316 212 75 0 25 chr2 220835203 220835243 -32421340 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 1565 32 0 0 chr2 220835291 220835480 -32421103 - L1PA2 LINE L1 0 6155 5967 4866 16 9 0 chr2 220835480 220836048 -32420535 + L1PA2 LINE L1 5400 5972 -183 682 220 31 85 chr2 220836059 220836360 -32420223 + L1M4 LINE L1 2850 3123 -3023 797 145 24 6 chr2 220836360 220836526 -32420057 + L1MA7 LINE L1 6119 6287 -4 682 220 31 85 chr2 220836526 220836647 -32419936 + L1M4 LINE L1 3123 3249 -2897 489 294 111 6 chr2 220836648 220836828 -32419755 + LTR16A1 LTR ERVL 1 199 -258 395 266 6 10 chr2 220836932 220837045 -32419538 - L1MA10 LINE L1 -62 6263 5989 840 268 102 37 chr2 220838309 220838742 -32417841 + MLT1C LTR MaLR 7 467 0 4103 199 3 50 chr2 220838743 220839660 -32416923 + MLT1C-int LTR MaLR 2 875 -496 295 280 98 42 chr2 220839933 220840383 -32416200 + L1MEd LINE L1 841 1302 -4827 21 0 0 0 chr2 220840641 220840662 -32415921 + AT_rich Low_complexity Low_complexity 1 21 0 841 305 14 0 chr2 220840729 220840952 -32415631 - MIR SINE MIR -25 237 12 288 294 0 0 chr2 220841020 220841088 -32415495 - L2 LINE L2 -3 3310 3243 715 286 112 27 chr2 220841175 220841811 -32414772 + L1MEd LINE L1 2549 3238 -2891 651 282 123 72 chr2 220841814 220842246 -32414337 - L2 LINE L2 -381 2933 2480 233 217 0 65 chr2 220842822 220842914 -32413669 + MLT1J2 LTR MaLR 365 450 0 242 325 0 0 chr2 220843689 220843766 -32412817 + GA-rich Low_complexity Low_complexity 2 78 0 1674 226 38 96 chr2 220843874 220844476 -32412107 + MLT1E2 LTR MaLR 60 626 0 1899 166 13 42 chr2 220844928 220845314 -32411269 + THE1C LTR MaLR 1 375 0 23 33 0 0 chr2 220848337 220848367 -32408216 + AT_rich Low_complexity Low_complexity 1 30 0 812 188 29 13 chr2 220848542 220848841 -32407742 + MLT1A1 LTR MaLR 1 365 0 302 234 26 0 chr2 220849424 220849501 -32407082 + CT-rich Low_complexity Low_complexity 2 80 0 436 320 69 30 chr2 220849743 220850170 -32406413 - LTR16A1 LTR ERVL 0 457 1 5348 124 26 8 chr2 220850336 220851727 -32404856 - L1PA13 LINE L1 -5 6158 4733 13184 147 26 14 chr2 220851746 220852086 -32404497 - L1PB1 LINE L1 -1 6866 6531 288 0 0 0 chr2 220852086 220852118 -32404465 + (TG)n Simple_repeat Simple_repeat 2 33 0 13184 147 26 14 chr2 220852118 220853980 -32402603 - L1PB1 LINE L1 -336 6531 4692 2109 111 0 0 chr2 220853980 220854287 -32402296 - AluSc SINE Alu 0 307 1 13184 147 26 14 chr2 220854287 220854474 -32402109 - L1PB1 LINE L1 -2175 4692 4509 274 73 18 18 chr2 220854474 220854529 -32402054 + (TTG)n Simple_repeat Simple_repeat 3 57 0 13184 147 26 14 chr2 220854529 220857416 -32399167 - L1PB1 LINE L1 -2358 4509 1124 6469 119 20 30 chr2 220857416 220858495 -32398088 - MER11C LTR ERVK 0 1071 3 13184 147 26 14 chr2 220858495 220859633 -32396950 - L1PB1 LINE L1 -5743 1124 1 1230 166 73 36 chr2 220859960 220860207 -32396376 + AluJb SINE Alu 12 267 -45 23 54 0 0 chr2 220860285 220860322 -32396261 + AT_rich Low_complexity Low_complexity 1 37 0 3727 153 20 6 chr2 220860597 220861245 -32395338 - L1MC1 LINE L1 -18 6315 5659 2072 111 0 10 chr2 220861310 220861599 -32394984 + AluSg SINE Alu 11 296 -14 566 248 47 0 chr2 220861619 220861748 -32394835 + L1MC4 LINE L1 7337 7471 -571 836 228 65 122 chr2 220861754 220862289 -32394294 + L1MC4 LINE L1 7538 8042 0 305 336 63 57 chr2 220863790 220864266 -32392317 + L2 LINE L2 2352 2830 -484 21 0 0 0 chr2 220864271 220864292 -32392291 + AT_rich Low_complexity Low_complexity 1 21 0 527 279 185 18 chr2 220864900 220865241 -32391342 + MLT1I LTR MaLR 3 400 -9 213 368 98 0 chr2 220868406 220868539 -32388044 - L2 LINE L2 -302 2970 2825 1850 134 20 36 chr2 220868679 220868985 -32387598 + AluSq SINE Alu 1 301 -12 538 268 26 88 chr2 220870473 220870701 -32385882 - MIR SINE MIR -4 258 45 1004 79 7 0 chr2 220871164 220871304 -32385279 + L1PA6 LINE L1 4769 4909 -1237 6986 52 7 3 chr2 220871306 220872406 -32384177 + L1PA6 LINE L1 5044 6147 -7 24 32 0 0 chr2 220872585 220872616 -32383967 + AT_rich Low_complexity Low_complexity 1 31 0 372 265 79 95 chr2 220873038 220873521 -32383062 + L1ME LINE L1 5318 5792 -329 674 270 137 70 chr2 220873581 220873817 -32382766 - MLT1J LTR MaLR -64 447 228 1256 107 58 36 chr2 220873817 220874042 -32382541 - MER30 DNA MER1_type 0 230 1 674 270 137 70 chr2 220874042 220874220 -32382363 - MLT1J LTR MaLR -283 228 5 420 320 47 0 chr2 220874324 220874474 -32382109 + MIR SINE MIR 105 261 -1 224 342 25 0 chr2 220874973 220875093 -32381490 + MIR SINE MIR 79 201 -61 378 42 0 0 chr2 220876021 220876069 -32380514 + (CA)n Simple_repeat Simple_repeat 1 48 0 21 57 0 0 chr2 220876387 220876422 -32380161 + AT_rich Low_complexity Low_complexity 1 35 0 24 32 0 0 chr2 220877547 220877578 -32379005 + AT_rich Low_complexity Low_complexity 1 31 0 320 123 0 46 chr2 220877580 220877645 -32378938 + (T)n Simple_repeat Simple_repeat 1 62 0 302 167 0 15 chr2 220878511 220878577 -32378006 + (TA)n Simple_repeat Simple_repeat 2 66 0 270 0 0 0 chr2 220879682 220879712 -32376871 + (CA)n Simple_repeat Simple_repeat 2 31 0 22 0 0 0 chr2 220879807 220879829 -32376754 + AT_rich Low_complexity Low_complexity 1 22 0 441 296 44 0 chr2 220881527 220881662 -32374921 + MLT1G3 LTR MaLR 156 296 -234 1175 198 209 129 chr2 220881670 220882377 -32374206 - LTR41 LTR ERVL -9 764 1 270 195 65 13 chr2 220882506 220882583 -32374000 + MLT1G1 LTR MaLR 515 595 0 201 312 32 11 chr2 220883498 220883591 -32372992 + L2 LINE L2 1426 1520 -1794 482 167 19 6 chr2 220883903 220884065 -32372518 + (TA)n Simple_repeat Simple_repeat 1 164 0 353 96 66 30 chr2 220884157 220884323 -32372260 + (TA)n Simple_repeat Simple_repeat 1 172 0 399 114 57 34 chr2 220884434 220884610 -32371973 + (TA)n Simple_repeat Simple_repeat 1 180 0 341 213 6 0 chr2 220884744 220884918 -32371665 + (TA)n Simple_repeat Simple_repeat 1 175 0 410 194 14 32 chr2 220884939 220885225 -32371358 + (TA)n Simple_repeat Simple_repeat 1 280 0 1537 335 85 43 chr2 220885225 220886346 -32370237 + L2 LINE L2 1809 2976 -338 27 0 0 0 chr2 220887421 220887448 -32369135 + AT_rich Low_complexity Low_complexity 1 27 0 607 275 94 71 chr2 220888143 220888536 -32368047 - MLT1I LTR MaLR -1 408 7 610 272 110 11 chr2 220888981 220889172 -32367411 + MER63A DNA MER1_type 1 210 0 200 189 0 0 chr2 220889249 220889286 -32367297 + (CA)n Simple_repeat Simple_repeat 1 37 0 22 70 0 0 chr2 220890989 220891032 -32365551 + AT_rich Low_complexity Low_complexity 1 43 0 295 67 27 40 chr2 220891303 220891378 -32365205 + (TA)n Simple_repeat Simple_repeat 2 75 0 1188 103 0 0 chr2 220891570 220891744 -32364839 + (TA)n Simple_repeat Simple_repeat 1 174 0 290 270 17 61 chr2 220892717 220892832 -32363751 + L2 LINE L2 3190 3299 -14 420 314 26 19 chr2 220892986 220893195 -32363388 + MER20B DNA MER1_type 2 218 -1 492 332 80 89 chr2 220893477 220894555 -32362028 - L3 LINE CR1 -295 1282 215 421 313 43 6 chr2 220894981 220895144 -32361439 + MIR SINE MIR 65 233 -29 214 286 52 13 chr2 220898547 220898624 -32357959 - MIR SINE MIR -91 117 38 190 56 56 0 chr2 220899010 220899046 -32357537 + T-rich Low_complexity Low_complexity 5 42 0 2093 122 3 6 chr2 220899303 220899615 -32356968 - AluSq SINE Alu -2 311 1 491 84 145 0 chr2 220899807 220899890 -32356693 + AluJb SINE Alu 203 297 -15 311 219 37 12 chr2 220900065 220900147 -32356436 + L2 LINE L2 3229 3312 -1 1366 187 8 0 chr2 220900481 220900727 -32355856 + AluSx SINE Alu 64 311 -1 2062 121 0 0 chr2 220902480 220902790 -32353793 + AluSc SINE Alu 1 310 0 183 273 61 81 chr2 220903953 220904052 -32352531 + MIR SINE MIR 40 136 -126 244 390 8 32 chr2 220904431 220904554 -32352029 - L2 LINE L2 -183 3089 2970 610 256 110 0 chr2 220905052 220905216 -32351367 + LTR16A LTR ERVL 27 208 -242 2509 52 3 0 chr2 220905323 220905630 -32350953 - AluY SINE Alu -3 308 1 1987 152 7 0 chr2 220905811 220906114 -32350469 - AluSx SINE Alu -7 305 1 33 80 0 0 chr2 220906119 220906194 -32350389 + AT_rich Low_complexity Low_complexity 1 75 0 228 222 0 0 chr2 220906484 220906556 -32350027 + (TA)n Simple_repeat Simple_repeat 2 73 0 253 305 12 37 chr2 220907182 220907264 -32349319 - L2 LINE L2 0 3313 3234 2384 141 64 16 chr2 220907499 220907883 -32348700 - L1PA16 LINE L1 -1 6165 5756 2439 121 30 3 chr2 220907883 220908248 -32348335 - THE1C LTR MaLR 0 375 1 2384 141 64 16 chr2 220908248 220908302 -32348281 - L1PA16 LINE L1 -410 5756 5706 2602 170 37 2 chr2 220908302 220908944 -32347639 + L1PA16 LINE L1 5040 5701 -465 189 74 0 0 chr2 220911650 220911677 -32344906 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 27 29 0 0 chr2 220911952 220911986 -32344597 + AT_rich Low_complexity Low_complexity 1 34 0 311 315 46 0 chr2 220913212 220913320 -32343263 + HAL1 LINE L1 187 299 -2208 1258 303 92 37 chr2 220913326 220913523 -32343060 - MLT1G LTR MaLR -7 583 398 1697 192 25 11 chr2 220913523 220913883 -32342700 + MLT1A1 LTR MaLR 1 365 0 1258 303 92 37 chr2 220913883 220914204 -32342379 - MLT1G LTR MaLR -192 398 36 946 309 143 14 chr2 220914254 220914772 -32341811 + HAL1 LINE L1 381 965 -1542 1595 286 97 21 chr2 220914792 220914866 -32341717 + HAL1 LINE L1 1176 1243 -1264 2253 107 3 0 chr2 220914866 220915166 -32341417 + AluSx SINE Alu 1 301 -11 1595 286 97 21 chr2 220915166 220915902 -32340681 + HAL1 LINE L1 1243 2048 -459 252 200 0 0 chr2 220916446 220916501 -32340082 + (TG)n Simple_repeat Simple_repeat 2 56 0 25 31 0 0 chr2 220916767 220916799 -32339784 + AT_rich Low_complexity Low_complexity 1 32 0 919 320 78 21 chr2 220918984 220919456 -32337127 - LTR33A LTR ERVL -21 502 4 880 167 33 122 chr2 220919615 220919860 -32336723 - MER58A DNA MER1_type 0 224 2 248 323 135 46 chr2 220922232 220922514 -32334069 - L3 LINE CR1 -16 1561 1255 21 0 0 0 chr2 220922655 220922676 -32333907 + AT_rich Low_complexity Low_complexity 1 21 0 321 197 0 0 chr2 220922871 220922932 -32333651 - HsTC2 DNA Tc2 -2 1896 1836 1246 274 121 21 chr2 220924615 220925093 -32331490 + MLT1H LTR MaLR 4 529 -20 298 291 58 19 chr2 220925521 220925624 -32330959 + MER5A DNA MER1_type 16 122 -67 450 296 0 17 chr2 220926018 220926133 -32330450 - MLT2E LTR ERVL -484 144 32 312 27 0 0 chr2 220926626 220926663 -32329920 + (TG)n Simple_repeat Simple_repeat 2 38 0 495 298 82 7 chr2 220926744 220926935 -32329648 - MIR SINE MIR -56 206 4 12897 139 45 22 chr2 220928208 220930058 -32326525 + Tigger1 DNA MER2_type 3 1916 -502 2129 131 0 0 chr2 220930058 220930355 -32326228 - AluSx SINE Alu -15 297 1 12897 139 45 22 chr2 220930355 220930763 -32325820 + Tigger1 DNA MER2_type 1916 2313 -105 5944 141 9 3 chr2 220930777 220932236 -32324347 - L1PA15 LINE L1 -21 6144 4678 645 140 0 0 chr2 220932267 220932360 -32324223 + Tigger1 DNA MER2_type 2326 2418 0 866 239 94 38 chr2 220932545 220932897 -32323686 + L1ME LINE L1 4182 4560 -1586 1784 161 80 6 chr2 220932897 220933246 -32323337 - THE1C LTR MaLR 0 375 1 866 239 94 38 chr2 220933246 220933286 -32323297 + L1ME LINE L1 4560 4596 -1550 821 255 129 27 chr2 220933387 220934017 -32322566 + L1ME LINE L1 4774 5473 -689 * 1221 249 23 7 chr2 220934015 220934316 -32322267 + L1MC4a LINE L1 5354 5659 -507 879 186 93 0 chr2 220934618 220934811 -32321772 + Tigger7 DNA MER2_type 2277 2487 0 901 172 75 23 chr2 220935332 220935506 -32321077 - MER7A DNA MER2_type -165 181 1 1778 257 78 29 chr2 220935538 220936091 -32320492 - L2 LINE L2 -946 2368 1789 351 292 66 70 chr2 220936216 220936459 -32320124 + L1MC4a LINE L1 5683 5924 -1884 244 231 0 0 chr2 220939140 220939192 -32317391 - L2 LINE L2 -9 3304 3253 1350 288 58 45 chr2 220939907 220940102 -32316481 - MLT1F LTR MaLR 0 542 351 2251 163 57 5 chr2 220940102 220940507 -32316076 - MSTB LTR MaLR 0 426 1 1350 288 58 45 chr2 220940507 220940845 -32315738 - MLT1F LTR MaLR -191 351 2 21 36 0 0 chr2 220941297 220941325 -32315258 + AT_rich Low_complexity Low_complexity 1 28 0 255 261 23 11 chr2 220941824 220941912 -32314671 + MER110A LTR ERV1 81 169 -299 471 267 49 36 chr2 220941987 220942227 -32314356 + MER110A LTR ERV1 197 457 -11 2268 97 0 0 chr2 220942521 220942819 -32313764 + AluSg SINE Alu 1 298 -12 366 254 135 35 chr2 220944185 220944419 -32312164 - MLT1H LTR MaLR -3 550 303 27 0 0 0 chr2 220944616 220944643 -32311940 + AT_rich Low_complexity Low_complexity 1 27 0 269 304 98 0 chr2 220944711 220944803 -32311780 - MLT1H LTR MaLR -369 180 80 885 101 72 0 chr2 220945100 220945239 -32311344 - L1PA13 LINE L1 0 6163 6015 691 304 101 0 chr2 220946663 220946900 -32309683 + MIR SINE MIR 2 262 0 22 0 0 0 chr2 220947275 220947297 -32309286 + AT_rich Low_complexity Low_complexity 1 22 0 387 0 0 0 chr2 220948255 220948298 -32308285 + (CA)n Simple_repeat Simple_repeat 2 44 0 24 53 0 0 chr2 220949542 220949580 -32307003 + AT_rich Low_complexity Low_complexity 1 38 0 246 300 23 77 chr2 220949705 220949835 -32306748 + MIR SINE MIR 109 231 -31 642 306 116 31 chr2 220949976 220950365 -32306218 - MLT1K LTR MaLR -7 581 160 393 250 10 48 chr2 220950741 220950845 -32305738 - MLT1A1 LTR MaLR -78 471 372 2115 171 53 19 chr2 220951393 220951807 -32304776 + MSTC LTR MaLR 1 428 0 205 156 0 0 chr2 220951819 220951851 -32304732 + GA-rich Low_complexity Low_complexity 1 32 0 213 94 0 0 chr2 220952585 220952617 -32303966 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 1202 287 82 123 chr2 220952692 220954092 -32302491 - L2 LINE L2 -319 2994 1651 269 187 13 0 chr2 220955589 220955664 -32300919 + (TG)n Simple_repeat Simple_repeat 2 77 0 1297 208 86 4 chr2 220956107 220956386 -32300197 - MLT1D LTR MaLR -52 453 152 1623 179 8 56 chr2 220956439 220956796 -32299787 - MLT1A1 LTR MaLR -25 340 1 642 260 34 0 chr2 220956798 220956944 -32299639 - MLT1D LTR MaLR -352 153 3 29 60 0 0 chr2 220957839 220957889 -32298694 + AT_rich Low_complexity Low_complexity 1 50 0 252 0 0 0 chr2 220959272 220959300 -32297283 + (TG)n Simple_repeat Simple_repeat 2 29 0 1050 292 143 0 chr2 220959379 220959770 -32296813 - MLT1J LTR MaLR -64 447 1 251 268 0 0 chr2 220959873 220959929 -32296654 + CT-rich Low_complexity Low_complexity 2 57 0 207 337 129 0 chr2 220959947 220960048 -32296535 - L2 LINE L2 -18 3254 3141 2199 106 0 13 chr2 220960243 220960545 -32296038 + AluSg SINE Alu 1 298 -12 535 310 66 41 chr2 220960583 220960976 -32295607 + MLT1I LTR MaLR 5 407 -2 23 0 0 0 chr2 220962372 220962395 -32294188 + AT_rich Low_complexity Low_complexity 1 23 0 51 31 0 0 chr2 220962688 220962753 -32293830 + AT_rich Low_complexity Low_complexity 1 65 0 291 196 18 36 chr2 220962791 220962903 -32293680 + (TTATA)n Simple_repeat Simple_repeat 1 110 0 982 292 66 25 chr2 220965542 220966070 -32290513 - L1MEc LINE L1 -3128 3087 2538 594 304 59 10 chr2 220966093 220966443 -32290140 - L1MEc LINE L1 -3760 2492 2135 314 281 90 51 chr2 220966697 220966875 -32289708 - L1MEc LINE L1 -4579 1817 1633 2596 128 29 17 chr2 220966882 220967290 -32289293 + MLT2A2 LTR ERVL 1 413 -40 296 87 0 22 chr2 220967336 220967382 -32289201 - MLT2A2 LTR ERVL -10 443 399 377 179 35 40 chr2 220967383 220967677 -32288906 + (TATAA)n Simple_repeat Simple_repeat 1 292 0 381 93 87 6 chr2 220967685 220967846 -32288737 + (TA)n Simple_repeat Simple_repeat 1 174 0 42 36 0 0 chr2 220967846 220967902 -32288681 + AT_rich Low_complexity Low_complexity 1 56 0 386 85 91 6 chr2 220967902 220968067 -32288516 + (TA)n Simple_repeat Simple_repeat 2 180 0 502 80 83 25 chr2 220968081 220968655 -32287928 + (TA)n Simple_repeat Simple_repeat 1 607 0 32972 84 41 25 chr2 220968658 220969266 -32287317 + HERVL-A2 LTR ERVL 702 1299 -4355 182 278 70 104 chr2 220969266 220969381 -32287202 + MER5B DNA MER1_type 66 176 -2 32972 84 41 25 chr2 220969381 220973486 -32283097 + HERVL-A2 LTR ERVL 1299 5654 0 2700 113 46 0 chr2 220973486 220973877 -32282706 + MLT2A2 LTR ERVL 1 409 -44 204 276 35 0 chr2 220973889 220973976 -32282607 + (TA)n Simple_repeat Simple_repeat 1 90 0 390 21 0 0 chr2 220973990 220974037 -32282546 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 298 77 0 0 chr2 220974039 220974078 -32282505 + MLT2A2 LTR ERVL 413 451 -2 31 82 0 0 chr2 220974362 220974435 -32282148 + AT_rich Low_complexity Low_complexity 1 73 0 247 261 50 33 chr2 220974547 220974727 -32281856 - L1M4 LINE L1 -2634 3512 3330 9401 205 20 6 chr2 220974787 220976990 -32279593 - L1 LINE L1 -846 5300 3068 497 283 142 74 chr2 220977000 220977597 -32278986 - L1MEd LINE L1 -5052 1067 430 2736 176 123 44 chr2 220977600 220978282 -32278301 + LTR28 LTR ERV1 1 736 -284 332 150 100 0 chr2 220978269 220978329 -32278254 + LTR27 LTR ERV1 568 633 -3 * 278 302 107 29 chr2 220978502 220978707 -32277876 - L1MEd LINE L1 -5880 239 19 312 357 65 30 chr2 220978723 220978891 -32277692 + L2 LINE L2 3096 3269 -3 342 0 0 0 chr2 220981109 220981147 -32275436 + (TG)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chr2 220981164 220981185 -32275398 + AT_rich Low_complexity Low_complexity 1 21 0 787 241 25 25 chr2 220981650 220981853 -32274730 - MER20 DNA MER1_type -12 207 5 21 0 0 0 chr2 220982166 220982187 -32274396 + AT_rich Low_complexity Low_complexity 1 21 0 2230 96 0 7 chr2 220982357 220982660 -32273923 + AluSg SINE Alu 1 301 -9 1167 320 64 50 chr2 220984131 220984678 -32271905 - HERV16 LTR ERVL -4103 893 328 2166 93 0 7 chr2 220984678 220984978 -32271605 + AluSc SINE Alu 1 298 -11 1167 320 64 50 chr2 220984978 220985310 -32271273 - HERV16 LTR ERVL -4668 328 2 550 331 22 0 chr2 220985317 220985501 -32271082 - LTR16A LTR ERVL -6 444 257 414 39 0 0 chr2 220985507 220985559 -32271024 + (TC)n Simple_repeat Simple_repeat 1 52 0 198 0 0 0 chr2 220985558 220985580 -32271003 + (CA)n Simple_repeat Simple_repeat 1 22 0 * 321 287 55 72 chr2 220985659 220985840 -32270743 + MIR SINE MIR 75 252 -10 531 306 103 67 chr2 220986277 220986666 -32269917 + MLT1K LTR MaLR 126 534 -54 1313 156 37 0 chr2 220986666 220986909 -32269674 - L1MA5A LINE L1 -3 6294 6043 531 306 103 67 chr2 220986909 220986954 -32269629 + MLT1K LTR MaLR 534 576 -12 230 358 0 0 chr2 220987041 220987108 -32269475 + L2 LINE L2 3239 3305 -8 192 77 0 0 chr2 220987179 220987205 -32269378 + (TG)n Simple_repeat Simple_repeat 2 27 0 23 0 0 0 chr2 220987288 220987311 -32269272 + AT_rich Low_complexity Low_complexity 1 23 0 22 80 0 0 chr2 220987482 220987532 -32269051 + AT_rich Low_complexity Low_complexity 1 50 0 1805 104 11 4 chr2 220987705 220987965 -32268618 - AluSx SINE Alu -9 303 42 21 0 0 0 chr2 220988493 220988514 -32268069 + AT_rich Low_complexity Low_complexity 1 21 0 2088 74 0 92 chr2 220988886 220989222 -32267361 + AluY SINE Alu 1 305 -6 366 254 135 35 chr2 220991228 220991462 -32265121 - MLT1H LTR MaLR -3 550 303 27 0 0 0 chr2 220991659 220991686 -32264897 + AT_rich Low_complexity Low_complexity 1 27 0 885 101 72 0 chr2 220992143 220992282 -32264301 - L1PA13 LINE L1 0 6163 6015 25 0 0 0 chr2 220994080 220994105 -32262478 + AT_rich Low_complexity Low_complexity 1 25 0 329 250 47 66 chr2 220997418 220997630 -32258953 - L1MC4 LINE L1 -1 8041 7834 2368 250 85 38 chr2 220997685 220998783 -32257800 - L1ME2 LINE L1 -10 6154 5005 321 47 0 0 chr2 220998789 220998832 -32257751 + (CA)n Simple_repeat Simple_repeat 2 44 0 617 371 20 8 chr2 220999183 220999431 -32257152 - L2 LINE L2 -3056 258 8 391 236 75 11 chr2 220999723 220999897 -32256686 + L1ME3 LINE L1 2835 3019 -3127 23 92 0 0 chr2 220999955 221000020 -32256563 + AT_rich Low_complexity Low_complexity 1 65 0 672 208 0 0 chr2 221000061 221000181 -32256402 + AluJb SINE Alu 156 275 -37 405 0 0 0 chr2 221000181 221000226 -32256357 + (TG)n Simple_repeat Simple_repeat 1 45 0 389 169 0 22 chr2 221000239 221000328 -32256255 + GA-rich Low_complexity Low_complexity 2 88 0 1873 207 90 12 chr2 221000603 221001091 -32255492 + L1ME2 LINE L1 5523 6048 -116 443 247 0 124 chr2 221001704 221001882 -32254701 - MIR SINE MIR -50 212 57 1194 213 117 44 chr2 221001943 221002446 -32254137 - L1MC5 LINE L1 -121 7840 7301 236 224 86 0 chr2 221002501 221002559 -32254024 - MIR SINE MIR -186 76 14 391 374 94 31 chr2 221003562 221003880 -32252703 - L2 LINE L2 -58 3214 2877 602 344 92 31 chr2 221004109 221004784 -32251799 - L2 LINE L2 -737 2577 1862 21 0 0 0 chr2 221005656 221005677 -32250906 + AT_rich Low_complexity Low_complexity 1 21 0 16979 36 1 1 chr2 221005715 221008560 -32248023 - L1PA5 LINE L1 0 6154 3309 564 310 110 29 chr2 221009564 221010842 -32245741 + L1ME3 LINE L1 4062 5541 -621 1675 236 51 33 chr2 221010842 221011333 -32245250 + MLT1D LTR MaLR 2 501 -4 564 310 110 29 chr2 221011333 221011710 -32244873 + L1ME3 LINE L1 5541 5886 -276 917 206 61 88 chr2 221011915 221012323 -32244260 + MLT2C1 LTR ERVL 1 397 0 2135 75 3 0 chr2 221012494 221012831 -32243752 + AluY SINE Alu 1 338 0 229 310 60 10 chr2 221013532 221013632 -32242951 + MIR SINE MIR 66 170 -92 223 261 54 11 chr2 221015125 221015217 -32241366 - MIR SINE MIR 0 262 167 273 209 75 15 chr2 221015670 221015737 -32240846 - MER117 DNA MER1_type -113 84 14 * 383 267 0 0 chr2 221015722 221015812 -32240771 + MER117 DNA MER1_type 73 162 -35 26 64 0 0 chr2 221017730 221017777 -32238806 + AT_rich Low_complexity Low_complexity 1 47 0 21 36 0 0 chr2 221018400 221018428 -32238155 + AT_rich Low_complexity Low_complexity 1 28 0 221 173 0 58 chr2 221018641 221018693 -32237890 + A-rich Low_complexity Low_complexity 3 51 0 364 158 10 10 chr2 221018999 221019100 -32237483 + (TA)n Simple_repeat Simple_repeat 1 101 0 511 304 7 7 chr2 221022250 221022388 -32234195 + MER5B DNA MER1_type 1 138 -40 389 318 81 49 chr2 221022454 221022762 -32233821 - HAL1 LINE L1 -2185 322 5 318 314 68 0 chr2 221023822 221023940 -32232643 - MIR SINE MIR -8 254 129 233 173 49 37 chr2 221023971 221024052 -32232531 + (TAGA)n Simple_repeat Simple_repeat 1 82 0 22 35 0 0 chr2 221024072 221024101 -32232482 + AT_rich Low_complexity Low_complexity 1 29 0 1534 178 11 42 chr2 221024559 221024846 -32231737 + AluJo SINE Alu 1 278 -34 816 88 0 0 chr2 221024851 221024965 -32231618 + (GGAA)n Simple_repeat Simple_repeat 3 116 0 209 247 129 11 chr2 221025660 221025753 -32230830 - L3b LINE CR1 -303 1280 1177 1849 116 72 11 chr2 221027333 221027610 -32228973 - AluSg SINE Alu -14 296 3 1898 120 83 8 chr2 221027770 221028145 -32228438 + LTR7 LTR ERV1 1 450 0 13247 133 11 23 chr2 221028145 221030863 -32225720 + HERVH LTR ERV1 1 2995 -4718 2604 173 11 0 chr2 221030842 221031299 -32225284 + HERVH LTR ERV1 3140 3601 -4112 * 6563 123 4 4 chr2 221031286 221032424 -32224159 + HERVH LTR ERV1 3836 5286 -1805 1456 193 7 0 chr2 221032424 221032704 -32223879 + HERVH LTR ERV1 5747 6028 -1685 * 3598 112 11 9 chr2 221032686 221033242 -32223341 + HERVH LTR ERV1 7157 7713 0 1884 114 96 21 chr2 221033242 221033617 -32222966 + LTR7 LTR ERV1 1 450 0 4788 70 2 0 chr2 221033716 221034332 -32222251 - L1PA6 LINE L1 -2 6152 5536 1560 44 48 5 chr2 221034333 221034605 -32221978 + L1P2 LINE L1 5202 5485 -669 27 29 0 0 chr2 221036047 221036081 -32220502 + AT_rich Low_complexity Low_complexity 1 34 0 348 302 40 20 chr2 221036818 221036967 -32219616 - MIR SINE MIR 0 262 111 2209 56 0 8 chr2 221037566 221037833 -32218750 + AluY SINE Alu 29 293 -18 247 281 5 0 chr2 221037835 221037913 -32218670 - MIR SINE MIR -62 146 74 198 407 78 25 chr2 221037994 221038237 -32218346 - L2 LINE L2 -213 3059 2804 180 111 0 0 chr2 221038290 221038317 -32218266 + (TTTTC)n Simple_repeat Simple_repeat 3 29 0 1773 132 0 11 chr2 221038320 221038593 -32217990 - AluSx SINE Alu 0 312 43 369 264 167 42 chr2 221038733 221038877 -32217706 - MER5A DNA MER1_type -3 186 25 428 326 34 17 chr2 221039709 221039887 -32216696 - MER5A DNA MER1_type -6 183 3 1837 58 0 5 chr2 221041437 221041660 -32214923 + AluY SINE Alu 79 300 -11 297 0 0 0 chr2 221042146 221042179 -32214404 + (TG)n Simple_repeat Simple_repeat 2 34 0 199 293 85 12 chr2 221042433 221042515 -32214068 + L2 LINE L2 3171 3258 -14 770 185 0 15 chr2 221042529 221042664 -32213919 - FLAM_C SINE Alu 0 133 1 259 318 45 0 chr2 221042721 221042831 -32213752 + L2 LINE L2 2745 2859 -455 24 0 0 0 chr2 221043072 221043096 -32213487 + AT_rich Low_complexity Low_complexity 1 24 0 368 367 65 0 chr2 221043187 221043356 -32213227 - MIR SINE MIR 0 262 83 5130 50 23 26 chr2 221043418 221044114 -32212469 + L1PA8 LINE L1 5476 6169 -3 812 196 0 0 chr2 221044308 221044441 -32212142 + AluJb SINE Alu 1 133 -179 213 94 0 0 chr2 221044863 221044895 -32211688 + (CA)n Simple_repeat Simple_repeat 1 32 0 1930 122 35 32 chr2 221045332 221045644 -32210939 + AluSp SINE Alu 1 313 0 2031 160 0 0 chr2 221045867 221046174 -32210409 - AluSx SINE Alu -5 307 1 941 239 33 9 chr2 221046291 221046504 -32210079 - MER20 DNA MER1_type -1 218 1 21 57 0 0 chr2 221046562 221046597 -32209986 + AT_rich Low_complexity Low_complexity 1 35 0 241 301 36 72 chr2 221048425 221048591 -32207992 - LTR16C LTR ERVL 0 491 332 1495 219 118 26 chr2 221051296 221051741 -32204842 - MLT2B1 LTR ERVL 0 554 3 1336 274 51 30 chr2 221053671 221054106 -32202477 + LTR16B LTR ERVL 20 463 -1 425 376 52 39 chr2 221054107 221054549 -32202034 + L2 LINE L2 2076 2523 -791 346 301 36 57 chr2 221054614 221054807 -32201776 + HAL1 LINE L1 190 378 -2129 281 235 62 25 chr2 221054924 221055005 -32201578 + HAL1 LINE L1 546 629 -1878 232 294 35 12 chr2 221055127 221055212 -32201371 + HAL1 LINE L1 754 840 -1667 393 235 110 15 chr2 221055532 221055732 -32200851 + HAL1 LINE L1 1963 2181 -326 912 207 83 0 chr2 221055888 221056057 -32200526 - MER5A DNA MER1_type -5 184 2 200 292 176 19 chr2 221057877 221057990 -32198593 + MIR SINE MIR 24 142 -66 323 302 8 54 chr2 221058444 221058573 -32198010 + L2 LINE L2 3145 3267 -5 182 401 80 7 chr2 221058565 221058702 -32197881 - L2 LINE L2 -453 2861 2715 * 525 256 47 10 chr2 221059293 221059564 -32197019 - L1MD3 LINE L1 -3 7982 6026 258 214 78 19 chr2 221060075 221060178 -32196405 + HAL1 LINE L1 1950 2058 -449 5200 241 56 41 chr2 221060248 221060402 -32196181 + L1MDa LINE L1 2419 2569 -3971 2308 85 10 0 chr2 221060402 221060696 -32195887 - AluY SINE Alu -14 297 1 5200 241 56 41 chr2 221060696 221060733 -32195850 + L1MDa LINE L1 2569 2604 -3936 2592 222 51 11 chr2 221060733 221061359 -32195224 + MER82 DNA MER2_type 2 652 -1 5200 241 56 41 chr2 221061359 221062095 -32194488 + L1MDa LINE L1 2604 3327 -3213 3840 30 4 0 chr2 221062095 221062555 -32194028 + L1PA4 LINE L1 5691 6152 -3 5200 241 56 41 chr2 221062555 221063523 -32193060 + L1MDa LINE L1 3327 4367 -2173 3213 207 28 73 chr2 221063523 221064010 -32192573 + MER21B LTR ERV1 1 430 -433 2090 140 7 0 chr2 221064010 221064317 -32192266 + AluSx SINE Alu 1 309 -3 3213 207 28 73 chr2 221064317 221064731 -32191852 + MER21B LTR ERV1 430 861 -2 5200 241 56 41 chr2 221064731 221065096 -32191487 + L1MDa LINE L1 4367 4725 -1815 250 277 8 62 chr2 221065169 221065225 -32191358 + L1MDa LINE L1 4730 4787 -1753 1383 184 153 48 chr2 221065225 221065644 -32190939 + MER31B LTR ERV1 1 463 -3 250 277 8 62 chr2 221065644 221065717 -32190866 + L1MDa LINE L1 4787 4852 -1688 950 85 0 57 chr2 221066683 221066824 -32189759 + L1PA8 LINE L1 6022 6154 -18 1591 85 0 0 chr2 221067157 221067368 -32189215 - L1PA7 LINE L1 -8 6146 5936 1075 220 116 39 chr2 221067899 221068158 -32188425 + AluJo SINE Alu 1 279 -33 458 0 35 0 chr2 221068158 221068215 -32188368 + (GAAA)n Simple_repeat Simple_repeat 1 59 0 226 319 29 31 chr2 221068599 221068811 -32187772 + MIR SINE MIR 4 262 0 26 0 0 0 chr2 221070101 221070127 -32186456 + AT_rich Low_complexity Low_complexity 1 26 0 194 250 96 0 chr2 221070405 221070457 -32186126 + MIR SINE MIR 21 77 -131 473 324 6 18 chr2 221071370 221071540 -32185043 - L3 LINE CR1 -121 1456 1289 2322 182 28 15 chr2 221071744 221072205 -32184378 - MLT1C LTR MaLR 0 467 1 496 275 84 17 chr2 221072222 221072400 -32184183 + MIR SINE MIR 73 262 0 410 310 157 28 chr2 221072804 221073059 -32183524 - L3 LINE CR1 -355 1222 935 599 70 0 12 chr2 221073139 221073225 -32183358 + (TAGA)n Simple_repeat Simple_repeat 2 86 0 998 236 57 48 chr2 221073225 221073559 -32183024 - MLT2C1 LTR ERVL -60 337 1 397 235 112 0 chr2 221073572 221073670 -32182913 + MER117 DNA MER1_type 35 143 -54 2343 45 45 0 chr2 221075152 221075439 -32181144 - AluY SINE Alu -11 300 1 826 231 18 27 chr2 221075518 221075739 -32180844 + MER20 DNA MER1_type 1 219 0 29 0 0 0 chr2 221076048 221076077 -32180506 + AT_rich Low_complexity Low_complexity 1 29 0 2707 13 40 0 chr2 221076406 221076710 -32179873 - AluYb8 SINE Alu -2 316 1 748 204 97 0 chr2 221077823 221078009 -32178574 + LTR50 LTR ERVL 4 207 -588 366 300 80 23 chr2 221078048 221078334 -32178249 + LTR50 LTR ERVL 299 461 -62 26 0 0 0 chr2 221078684 221078710 -32177873 + AT_rich Low_complexity Low_complexity 1 26 0 331 281 156 11 chr2 221079559 221079822 -32176761 + L1 LINE L1 2720 3020 -3126 386 340 65 7 chr2 221079923 221080076 -32176507 + MIR SINE MIR 28 189 -73 295 341 65 0 chr2 221081033 221081156 -32175427 - MIR SINE MIR -65 197 67 30 27 0 0 chr2 221082201 221082238 -32174345 + AT_rich Low_complexity Low_complexity 1 37 0 211 220 0 20 chr2 221082907 221082957 -32173626 + MER5B DNA MER1_type 3 51 -127 5362 177 4 98 chr2 221082957 221084485 -32172098 + L1 LINE L1 3644 5027 -1119 189 0 0 0 chr2 221084486 221084507 -32172076 + (TA)n Simple_repeat Simple_repeat 1 21 0 2539 87 11 0 chr2 221084521 221084876 -32171707 + L1PB1 LINE L1 5792 6150 -1 265 250 12 71 chr2 221084949 221085033 -32171550 + MER5B DNA MER1_type 100 178 0 839 234 29 0 chr2 221085041 221085212 -32171371 + MER5A DNA MER1_type 1 176 -13 40931 33 22 1 chr2 221085978 221092002 -32164581 + L1PA2 LINE L1 1 6155 0 2860 177 46 14 chr2 221093515 221093607 -32162976 - L1MB4 LINE L1 -266 5914 5826 2664 16 7 3 chr2 221093607 221093913 -32162670 - AluY SINE Alu -4 307 1 2860 177 46 14 chr2 221093913 221094608 -32161975 - L1MB4 LINE L1 -354 5826 5099 786 228 15 0 chr2 221094618 221094820 -32161763 + L1MB4 LINE L1 5938 6142 -38 8117 184 24 8 chr2 221094820 221096373 -32160210 + L1M1 LINE L1 12 1589 -5976 1420 98 0 5 chr2 221096377 221096591 -32159992 + L1MA3 LINE L1 6093 6305 0 275 111 0 0 chr2 221096594 221096648 -32159935 + L1MB4 LINE L1 6126 6179 -1 1974 121 4 4 chr2 221096695 221096976 -32159607 - AluSc SINE Alu 0 309 29 23 33 0 0 chr2 221096982 221097012 -32159571 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr2 221097232 221097254 -32159329 + AT_rich Low_complexity Low_complexity 1 22 0 1399 180 28 45 chr2 221098285 221098426 -32158157 + AluJb SINE Alu 1 143 -164 189 0 0 0 chr2 221098426 221098447 -32158136 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1399 180 28 45 chr2 221098447 221098617 -32157966 + AluJb SINE Alu 143 307 0 189 0 0 0 chr2 221098909 221098930 -32157653 + (TTTTTA)n Simple_repeat Simple_repeat 4 24 0 466 249 203 30 chr2 221100185 221100382 -32156201 + MIR SINE MIR 21 251 -11 1955 136 20 73 chr2 221100447 221100843 -32155740 - THE1C LTR MaLR 0 375 1 664 260 47 6 chr2 221101627 221101796 -32154787 - MIR SINE MIR -65 197 22 1962 210 30 14 chr2 221102266 221102700 -32153883 + MER70B LTR ERVL 1 441 -137 679 267 112 10 chr2 221103617 221103823 -32152760 + MIR SINE MIR 5 231 -31 477 317 118 46 chr2 221104022 221104181 -32152402 + L2 LINE L2 2635 2781 -532 423 254 23 15 chr2 221104181 221104311 -32152272 + MER94 DNA DNA 4 134 0 477 317 118 46 chr2 221104311 221104772 -32151811 + L2 LINE L2 2781 3308 -5 212 286 21 129 chr2 221155254 221155394 -32101189 - L2 LINE L2 -566 2748 2624 197 330 189 0 chr2 221155953 221156059 -32100524 - MIR SINE MIR -118 144 19 3233 140 12 0 chr2 221156248 221156747 -32099836 - MER84 LTR ERV1 -2 505 1 7061 129 3 2 chr2 221156747 221157783 -32098800 - MER84-int LTR ERV1 0 4954 3918 1190 186 68 86 chr2 221161231 221161484 -32095099 - MLT1B LTR MaLR 0 390 144 2026 103 4 4 chr2 221161484 221161778 -32094805 + AluSg SINE Alu 9 302 0 1190 186 68 86 chr2 221161778 221161920 -32094663 - MLT1B LTR MaLR -246 144 1 4584 160 56 53 chr2 221161998 221162597 -32093986 + L1MC3 LINE L1 6710 7316 -469 2240 169 59 0 chr2 221162597 221163005 -32093578 + MSTB1 LTR MaLR 1 432 0 4584 160 56 53 chr2 221163005 221163470 -32093113 + L1MC3 LINE L1 7316 7778 -7 243 329 0 0 chr2 221163641 221163711 -32092872 + MIR SINE MIR 193 262 0 884 316 104 63 chr2 221163979 221165083 -32091500 - ERVL LTR ERVL -3760 2004 856 296 293 0 47 chr2 221166054 221166160 -32090423 + MIR SINE MIR 45 145 -117 195 42 0 0 chr2 221166161 221166185 -32090398 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 21 36 0 0 chr2 221166680 221166708 -32089875 + AT_rich Low_complexity Low_complexity 1 28 0 402 235 41 151 chr2 221166714 221167059 -32089524 - L2 LINE L2 -17 3296 2990 222 318 179 51 chr2 221167121 221167713 -32088870 + L2 LINE L2 1064 1731 -1583 472 323 110 29 chr2 221168136 221168545 -32088038 - L2 LINE L2 -540 2774 2333 955 254 112 35 chr2 221169273 221169612 -32086971 + MLT1A1 LTR MaLR 1 365 0 295 284 112 17 chr2 221169681 221169797 -32086786 + MIR SINE MIR 78 204 -58 25 0 0 0 chr2 221169941 221169966 -32086617 + AT_rich Low_complexity Low_complexity 1 25 0 2135 129 0 0 chr2 221170135 221170430 -32086153 - AluSx SINE Alu -17 295 1 24 0 0 0 chr2 221170447 221170471 -32086112 + AT_rich Low_complexity Low_complexity 1 24 0 252 329 38 57 chr2 221170584 221170742 -32085841 + L2 LINE L2 2936 3090 -182 1319 222 65 26 chr2 221171129 221171480 -32085103 + MLT1A1 LTR MaLR 1 365 0 286 321 0 0 chr2 221171776 221171860 -32084723 + L2 LINE L2 3188 3271 -1 6245 95 22 3 chr2 221172004 221172986 -32083597 + L1PA10 LINE L1 5170 6168 0 206 261 0 0 chr2 221173470 221173516 -32083067 + A-rich Low_complexity Low_complexity 1 46 0 1961 151 16 0 chr2 221173774 221174078 -32082505 + AluSx SINE Alu 4 312 0 420 171 0 0 chr2 221174567 221174649 -32081934 + (TA)n Simple_repeat Simple_repeat 2 83 0 235 270 11 0 chr2 221174649 221174738 -32081845 + L1MC4 LINE L1 6614 6703 -1339 342 169 0 0 chr2 221174739 221174804 -32081779 + (TA)n Simple_repeat Simple_repeat 1 65 0 25 0 0 0 chr2 221175061 221175086 -32081497 + AT_rich Low_complexity Low_complexity 1 25 0 200 89 0 67 chr2 221175413 221175458 -32081125 + (A)n Simple_repeat Simple_repeat 1 42 0 183 336 16 48 chr2 221175840 221175965 -32080618 + L2 LINE L2 994 1114 -2200 459 334 159 44 chr2 221176051 221177066 -32079517 + L2 LINE L2 2097 3235 -37 219 338 0 0 chr2 221177195 221177263 -32079320 - MIR SINE MIR -7 255 188 2097 106 3 3 chr2 221177828 221178142 -32078441 + AluSq SINE Alu 1 314 0 29 0 0 0 chr2 221178441 221178470 -32078113 + AT_rich Low_complexity Low_complexity 1 29 0 8751 213 34 18 chr2 221178666 221182418 -32074165 + L1M2 LINE L1 1232 5069 -1779 2115 124 0 20 chr2 221182418 221182724 -32073859 + AluSx SINE Alu 1 300 -12 2016 134 0 0 chr2 221184545 221184836 -32071747 - AluSx SINE Alu -21 291 1 195 69 0 0 chr2 221184840 221184869 -32071714 + (T)n Simple_repeat Simple_repeat 1 29 0 299 232 0 0 chr2 221184976 221185051 -32071532 - AluS SINE Alu -244 57 1 243 0 0 0 chr2 221185288 221185315 -32071268 + (T)n Simple_repeat Simple_repeat 1 27 0 257 303 0 20 chr2 221185552 221185651 -32070932 + (TATATG)n Simple_repeat Simple_repeat 5 101 0 2425 86 0 0 chr2 221185926 221186230 -32070353 + AluSc SINE Alu 1 304 -5 2720 142 21 68 chr2 221186316 221186846 -32069737 + MER84 LTR ERV1 1 505 -2 508 240 7 34 chr2 221186907 221187053 -32069530 - LTR27 LTR ERV1 -1 635 494 2040 227 63 14 chr2 221187086 221187608 -32068975 - LTR27 LTR ERV1 -137 499 3 1932 126 7 0 chr2 221187807 221188085 -32068498 + AluSx SINE Alu 33 312 0 1203 64 0 0 chr2 221188165 221188321 -32068262 + L1PA4 LINE L1 5997 6152 -3 1111 215 91 102 chr2 221188532 221189049 -32067534 - MER67D LTR ERV1 -3 511 1 24 32 0 0 chr2 221189511 221189542 -32067041 + AT_rich Low_complexity Low_complexity 1 31 0 257 331 125 11 chr2 221190223 221190407 -32066176 - MIR SINE MIR -45 217 13 316 355 44 20 chr2 221191963 221192196 -32064387 - MIR SINE MIR -19 243 4 1807 244 126 14 chr2 221192833 221193317 -32063266 - MLT1F LTR MaLR 0 542 5 334 300 35 141 chr2 221193658 221193971 -32062612 + L2 LINE L2 2992 3271 -1 2461 129 8 3 chr2 221194524 221194897 -32061686 - THE1C LTR MaLR 0 375 1 2178 110 0 10 chr2 221195008 221195309 -32061274 - AluSc SINE Alu -11 298 1 236 252 146 10 chr2 221195541 221195644 -32060939 - MIR SINE MIR -65 197 81 2881 255 62 15 chr2 221196425 221196998 -32059585 + L1ME1 LINE L1 4828 5373 -793 1884 196 45 51 chr2 221196998 221197468 -32059115 - MLT1C LTR MaLR 0 467 1 2881 255 62 15 chr2 221197468 221198170 -32058413 + L1ME1 LINE L1 5373 6161 -5 1616 172 3 57 chr2 221198979 221199293 -32057290 - AluJo SINE Alu -4 308 12 23 33 0 0 chr2 221199303 221199333 -32057250 + AT_rich Low_complexity Low_complexity 1 30 0 235 250 0 60 chr2 221199651 221199735 -32056848 + (CATATA)n Simple_repeat Simple_repeat 5 83 0 22 56 0 0 chr2 221199964 221200000 -32056583 + AT_rich Low_complexity Low_complexity 1 36 0 21 57 0 0 chr2 221200117 221200152 -32056431 + AT_rich Low_complexity Low_complexity 1 35 0 1573 195 35 3 chr2 221200339 221200626 -32055957 - AluJb SINE Alu -16 296 1 351 186 23 12 chr2 221200849 221200935 -32055648 - MER92B LTR ERV1 0 636 550 2064 227 66 28 chr2 221200985 221201549 -32055034 - MER92B LTR ERV1 -51 585 1 282 116 0 0 chr2 221203971 221204014 -32052569 + (TA)n Simple_repeat Simple_repeat 2 44 0 378 0 0 0 chr2 221204015 221204057 -32052526 + (GA)n Simple_repeat Simple_repeat 1 42 0 1951 132 62 6 chr2 221204068 221204393 -32052190 - MER61A LTR ERV1 0 343 1 2439 107 19 2 chr2 221204393 221204979 -32051604 - MER61A-int LTR ERV1 0 5217 4577 27 49 0 0 chr2 221205543 221205584 -32050999 + AT_rich Low_complexity Low_complexity 1 41 0 21 0 0 0 chr2 221206509 221206530 -32050053 + AT_rich Low_complexity Low_complexity 1 21 0 2576 132 49 5 chr2 221206917 221207325 -32049258 + MSTA LTR MaLR 1 426 -2 388 363 17 17 chr2 221207328 221207507 -32049076 - MIR3 SINE MIR -7 201 23 339 314 81 31 chr2 221207605 221207710 -32048873 - MIR SINE MIR -1 261 163 1466 202 38 70 chr2 221207710 221208156 -32048427 - MSTB1 LTR MaLR 0 432 1 339 314 81 31 chr2 221208156 221208273 -32048310 - MIR SINE MIR -99 163 28 232 348 0 62 chr2 221208325 221208437 -32048146 - L2 LINE L2 -2 3311 3207 2256 114 0 0 chr2 221208448 221208754 -32047829 - AluSx SINE Alu -6 306 1 1845 142 79 0 chr2 221209850 221210168 -32046415 - MER2 DNA MER2_type 0 344 2 180 0 0 0 chr2 221210311 221210331 -32046252 + (A)n Simple_repeat Simple_repeat 1 20 0 183 386 38 15 chr2 221211093 221211225 -32045358 - L2 LINE L2 -696 2618 2484 299 340 107 13 chr2 221211536 221211686 -32044897 - L2 LINE L2 0 3272 3109 348 24 0 0 chr2 221211965 221212006 -32044577 + (CA)n Simple_repeat Simple_repeat 1 41 0 1496 236 85 73 chr2 221212584 221212751 -32043832 - MLT1G LTR MaLR -7 583 420 1530 196 21 14 chr2 221212751 221213042 -32043541 + AluJb SINE Alu 1 293 -19 1496 236 85 73 chr2 221213042 221213491 -32043092 - MLT1G LTR MaLR -170 420 1 642 279 107 9 chr2 221213651 221213866 -32042717 - MIR SINE MIR -26 236 1 235 322 6 81 chr2 221214262 221214436 -32042147 - L2 LINE L2 -16 3297 3137 609 192 40 0 chr2 221214797 221214922 -32041661 + MER5A DNA MER1_type 60 189 0 180 179 0 0 chr2 221214980 221215019 -32041564 + A-rich Low_complexity Low_complexity 4 42 0 1866 119 88 52 chr2 221215179 221215541 -32041042 - THE1C LTR MaLR 0 375 1 270 122 41 0 chr2 221215655 221215704 -32040879 + MER5A DNA MER1_type 55 105 -84 3961 130 27 5 chr2 221217618 221218257 -32038326 + MER39B LTR ERV1 1 653 0 400 121 54 72 chr2 221218373 221218511 -32038072 - MER34 LTR ERV1 -2 753 450 421 271 31 8 chr2 221218735 221218864 -32037719 - MER58 DNA MER1_type -83 132 1 234 320 0 33 chr2 221218896 221219046 -32037537 + CT-rich Low_complexity Low_complexity 3 147 0 3899 104 5 5 chr2 221219227 221219794 -32036789 - L1PA11 LINE L1 -1 6173 5607 6040 141 11 12 chr2 221219794 221221086 -32035497 + L1PA11 LINE L1 4304 5591 -583 1471 189 53 135 chr2 221221851 221222483 -32034100 + LTR49 LTR ERV1 1 569 -26 262 167 45 30 chr2 221223466 221223532 -32033051 + L1ME4a LINE L1 5597 5663 -458 293 273 27 0 chr2 221223590 221223700 -32032883 + L1ME4a LINE L1 5773 5885 -236 515 286 35 77 chr2 221224473 221224701 -32031882 + MER68 LTR ERV1 202 413 -149 1250 142 166 53 chr2 221224701 221225038 -32031545 - THE1C LTR MaLR 0 375 1 515 286 35 77 chr2 221225038 221225148 -32031435 + MER68 LTR ERV1 413 526 -36 211 299 75 8 chr2 221225662 221225796 -32030787 - L3b LINE CR1 -318 1265 1123 33 66 0 0 chr2 221226134 221226195 -32030388 + AT_rich Low_complexity Low_complexity 1 61 0 22 35 0 0 chr2 221226259 221226288 -32030295 + AT_rich Low_complexity Low_complexity 1 29 0 1479 177 54 11 chr2 221226414 221226691 -32029892 + AluJo SINE Alu 3 291 -21 26 30 0 0 chr2 221227229 221227262 -32029321 + AT_rich Low_complexity Low_complexity 1 33 0 328 349 9 17 chr2 221227583 221227725 -32028858 + MIR SINE MIR 18 156 -62 1305 281 60 17 chr2 221227738 221228158 -32028425 + MER74C LTR ERVL 4 441 -19 197 273 0 0 chr2 221228158 221228202 -32028381 + MIR SINE MIR 190 233 -29 238 294 68 34 chr2 221228969 221229115 -32027468 + MLT1I LTR MaLR 68 218 -191 581 322 39 14 chr2 221229602 221229810 -32026773 + MIR SINE MIR 49 261 -1 233 264 27 9 chr2 221230533 221230643 -32025940 + (TA)n Simple_repeat Simple_repeat 2 113 0 221 351 48 36 chr2 221231447 221231612 -32024971 + MIR SINE MIR 71 237 -25 25 0 0 0 chr2 221232343 221232368 -32024215 + AT_rich Low_complexity Low_complexity 1 25 0 29 47 0 0 chr2 221232648 221232691 -32023892 + AT_rich Low_complexity Low_complexity 1 43 0 25 65 0 0 chr2 221236264 221236310 -32020273 + AT_rich Low_complexity Low_complexity 1 46 0 22 0 0 0 chr2 221236527 221236549 -32020034 + AT_rich Low_complexity Low_complexity 1 22 0 189 0 0 0 chr2 221238586 221238607 -32017976 + (TGGA)n Simple_repeat Simple_repeat 1 21 0 25 0 0 0 chr2 221241709 221241734 -32014849 + AT_rich Low_complexity Low_complexity 1 25 0 217 293 193 32 chr2 221242177 221242362 -32014221 - MIR3 SINE MIR -49 213 5 298 259 218 27 chr2 221243485 221243632 -32012951 - MER5A DNA MER1_type -1 188 14 389 191 70 52 chr2 221245771 221245886 -32010697 - L2 LINE L2 -4 3309 3193 2134 70 0 0 chr2 221245947 221246232 -32010351 - AluY SINE Alu 0 307 23 181 315 137 0 chr2 221246610 221246683 -32009900 + MIR SINE MIR 46 128 -80 21 0 0 0 chr2 221246697 221246718 -32009865 + AT_rich Low_complexity Low_complexity 1 21 0 287 354 0 35 chr2 221247106 221247219 -32009364 - L2 LINE L2 -8 3264 3156 21 0 0 0 chr2 221248753 221248774 -32007809 + AT_rich Low_complexity Low_complexity 1 21 0 189 196 0 0 chr2 221249380 221249431 -32007152 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 387 0 0 0 chr2 221249478 221249521 -32007062 + (CA)n Simple_repeat Simple_repeat 1 43 0 2141 94 37 0 chr2 221249576 221249874 -32006709 - AluSg1 SINE Alu 0 309 1 329 307 131 62 chr2 221250154 221250330 -32006253 - MIR SINE MIR -6 256 69 396 0 0 0 chr2 221250660 221250704 -32005879 + (TG)n Simple_repeat Simple_repeat 2 45 0 272 281 121 16 chr2 221252187 221252324 -32004259 - MIR SINE MIR -64 144 30 251 203 0 72 chr2 221253064 221253133 -32003450 + (TATATG)n Simple_repeat Simple_repeat 1 64 0 192 296 141 52 chr2 221254345 221254480 -32002103 - MIR3 SINE MIR -8 200 54 370 373 46 16 chr2 221254910 221255216 -32001367 + L2 LINE L2 2270 2584 -730 268 271 0 35 chr2 221255362 221255447 -32001136 + L2 LINE L2 2595 2676 -638 1971 123 35 0 chr2 221255485 221255770 -32000813 + AluSg SINE Alu 6 300 -10 237 384 38 45 chr2 221256142 221256275 -32000308 + L2 LINE L2 3136 3267 -5 245 139 23 0 chr2 221257087 221257130 -31999453 + MIR SINE MIR 110 153 -109 2639 99 30 19 chr2 221257417 221257849 -31998734 + L1MA3 LINE L1 5867 6303 -2 30 0 0 0 chr2 221258847 221258877 -31997706 + AT_rich Low_complexity Low_complexity 1 30 0 429 262 127 0 chr2 221259854 221259980 -31996603 + MER69 DNA AcHobo 1 142 -1084 277 169 34 90 chr2 221259978 221260067 -31996516 + MER69 DNA AcHobo 2442 2525 -1 * 282 275 107 23 chr2 221260737 221260868 -31995715 + MIR SINE MIR 23 164 -98 418 241 204 12 chr2 221261954 221262116 -31994467 - MIR SINE MIR -45 217 25 1691 198 3 0 chr2 221263718 221264016 -31992567 + AluJb SINE Alu 1 299 -13 203 77 0 26 chr2 221265008 221265047 -31991536 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 25 75 0 0 chr2 221266039 221266092 -31990491 + AT_rich Low_complexity Low_complexity 1 53 0 402 258 73 26 chr2 221266179 221266330 -31990253 + MIR SINE MIR 101 258 -4 295 353 17 8 chr2 221266732 221266851 -31989732 + MIR3 SINE MIR 88 207 -1 2199 114 0 0 chr2 221267828 221268126 -31988457 - AluSc SINE Alu -11 298 1 392 313 54 0 chr2 221269441 221269553 -31987030 + L2 LINE L2 3177 3294 -19 2281 104 7 0 chr2 221269593 221269900 -31986683 + AluSc SINE Alu 1 309 0 1604 165 12 61 chr2 221269933 221270229 -31986354 + AluJo SINE Alu 1 281 -31 351 0 0 0 chr2 221270229 221270268 -31986315 + (CA)n Simple_repeat Simple_repeat 2 40 0 1604 165 12 61 chr2 221270268 221270299 -31986284 + AluJo SINE Alu 281 312 0 2072 165 51 21 chr2 221270636 221271072 -31985511 - MER61C LTR ERV1 -1 433 1 2156 110 10 10 chr2 221271138 221271448 -31985135 + AluSx SINE Alu 3 312 0 444 305 68 55 chr2 221271692 221271928 -31984655 + MIR SINE MIR 18 256 -6 225 65 0 0 chr2 221271930 221271961 -31984622 + (TTA)n Simple_repeat Simple_repeat 2 32 0 2636 25 0 10 chr2 221272024 221272338 -31984245 - AluY SINE Alu 0 311 1 24 53 0 0 chr2 221273167 221273205 -31983378 + AT_rich Low_complexity Low_complexity 1 38 0 2451 167 85 32 chr2 221273367 221273894 -31982689 + MER89 LTR ERV1 5 559 0 205 277 96 12 chr2 221273954 221274037 -31982546 - MIR SINE MIR -76 186 97 1622 176 14 17 chr2 221274110 221274406 -31982177 + AluJb SINE Alu 1 295 -17 283 327 98 13 chr2 221274831 221274984 -31981599 - MIR SINE MIR -34 228 63 522 266 57 17 chr2 221276078 221276255 -31980328 + MIR SINE MIR 37 220 -42 25 0 0 0 chr2 221278327 221278352 -31978231 + AT_rich Low_complexity Low_complexity 1 25 0 31 68 0 0 chr2 221282537 221282596 -31973987 + AT_rich Low_complexity Low_complexity 1 59 0 1543 204 0 7 chr2 221282606 221282900 -31973683 - AluJb SINE Alu -20 292 1 223 191 46 38 chr2 221283699 221283830 -31972753 + (TA)n Simple_repeat Simple_repeat 1 132 0 1615 71 0 0 chr2 221284918 221285160 -31971423 + L1PA8 LINE L1 5939 6180 0 22 88 0 0 chr2 221285533 221285590 -31970993 + AT_rich Low_complexity Low_complexity 1 57 0 1794 166 20 0 chr2 221285630 221285926 -31970657 - AluJb SINE Alu -8 304 3 22 0 0 0 chr2 221287017 221287039 -31969544 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 221287064 221287085 -31969498 + AT_rich Low_complexity Low_complexity 1 21 0 239 148 0 37 chr2 221287654 221287708 -31968875 + L1MC4 LINE L1 6652 6703 -1339 2221 69 0 0 chr2 221290216 221290491 -31966092 + AluY SINE Alu 1 275 -36 183 42 0 0 chr2 221290493 221290517 -31966066 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 1459 185 94 24 chr2 221291162 221291502 -31965081 + MLT1A1 LTR MaLR 1 364 -1 334 305 42 66 chr2 221292301 221292391 -31964192 - MIR SINE MIR -89 173 87 1857 133 48 33 chr2 221292391 221292723 -31963860 + MER1B DNA MER1_type 1 337 0 334 305 42 66 chr2 221292723 221292799 -31963784 - MIR SINE MIR -175 87 11 1049 175 0 0 chr2 221292866 221293037 -31963546 - AluJb SINE Alu -5 307 137 22 0 0 0 chr2 221293138 221293160 -31963423 + AT_rich Low_complexity Low_complexity 1 22 0 732 281 61 18 chr2 221293249 221293477 -31963106 + MIR SINE MIR 2 239 -23 357 296 178 12 chr2 221294982 221295151 -31961432 + MIR3 SINE MIR 10 206 -2 564 253 13 13 chr2 221295326 221295476 -31961107 + MIR SINE MIR 69 218 -44 21 82 0 0 chr2 221295498 221295547 -31961036 + AT_rich Low_complexity Low_complexity 1 49 0 27 0 0 0 chr2 221295824 221295851 -31960732 + AT_rich Low_complexity Low_complexity 1 27 0 273 98 0 0 chr2 221295906 221295947 -31960636 + (TG)n Simple_repeat Simple_repeat 1 41 0 196 263 0 75 chr2 221296149 221296229 -31960354 - L2 LINE L2 -1 3271 3198 639 256 63 71 chr2 221296454 221296692 -31959891 + MIR SINE MIR 5 240 -22 210 278 12 172 chr2 221299085 221299254 -31957329 + L2 LINE L2 2932 3073 -199 333 47 0 0 chr2 221299300 221299343 -31957240 + (TCCA)n Simple_repeat Simple_repeat 3 45 0 257 308 19 29 chr2 221299517 221299621 -31956962 - L1MC4 LINE L1 -1326 6716 6614 180 111 0 0 chr2 221299634 221299661 -31956922 + (TA)n Simple_repeat Simple_repeat 2 28 0 22 0 0 0 chr2 221300151 221300173 -31956410 + AT_rich Low_complexity Low_complexity 1 22 0 726 282 23 31 chr2 221300550 221300776 -31955807 + MIR SINE MIR 1 220 -42 601 311 99 42 chr2 221300952 221301447 -31955136 + Tigger8 DNA MER2_type 140 662 -4 188 306 0 16 chr2 221301629 221301691 -31954892 - MIR SINE MIR -5 257 197 22 0 0 0 chr2 221301860 221301882 -31954701 + AT_rich Low_complexity Low_complexity 1 22 0 2023 135 0 0 chr2 221304884 221305189 -31951394 - AluSx SINE Alu 0 305 1 228 86 0 0 chr2 221305384 221305419 -31951164 + (CA)n Simple_repeat Simple_repeat 2 36 0 185 262 24 0 chr2 221306786 221306828 -31949755 - L2 LINE L2 -14 3299 3257 874 226 156 0 chr2 221306845 221307044 -31949539 - MIR SINE MIR -4 258 29 800 324 36 49 chr2 221307102 221307549 -31949034 - L2 LINE L2 -421 2893 2453 867 315 25 22 chr2 221307591 221307905 -31948678 + L2 LINE L2 2999 3313 0 421 357 47 36 chr2 221308012 221308396 -31948187 - L2 LINE L2 -1217 2097 1710 2441 59 0 0 chr2 221309103 221309392 -31947191 - AluSg SINE Alu -21 289 1 189 379 23 0 chr2 221313068 221313155 -31943428 + MIR SINE MIR 123 211 -51 256 271 29 0 chr2 221313256 221313326 -31943257 + L2 LINE L2 3201 3272 0 202 192 39 0 chr2 221313470 221313522 -31943061 + (TA)n Simple_repeat Simple_repeat 2 55 0 1689 146 78 28 chr2 221313537 221313858 -31942725 - MER1B DNA MER1_type 0 337 1 2167 102 3 3 chr2 221315187 221315481 -31941102 - AluSc SINE Alu -15 294 1 25 31 0 0 chr2 221315887 221315919 -31940664 + AT_rich Low_complexity Low_complexity 1 32 0 1955 145 42 28 chr2 221316357 221316716 -31939867 + THE1B LTR MaLR 1 364 0 237 356 113 17 chr2 221317197 221317312 -31939271 + L2 LINE L2 3147 3272 0 2157 112 103 3 chr2 221318961 221319301 -31937282 - MSTA LTR MaLR -53 375 2 302 328 76 8 chr2 221320489 221320620 -31935963 - MER5A DNA MER1_type 0 189 50 1367 263 74 29 chr2 221320688 221321226 -31935357 + L2 LINE L2 2747 3313 0 238 309 0 15 chr2 221321425 221321493 -31935090 + MIR SINE MIR 40 106 -102 974 184 0 17 chr2 221321883 221322062 -31934521 - FRAM SINE Alu 0 176 1 454 255 176 0 chr2 221322148 221322336 -31934247 + MLT1H1 LTR MaLR 333 553 -2 30 0 0 0 chr2 221323249 221323279 -31933304 + AT_rich Low_complexity Low_complexity 1 30 0 2227 103 0 3 chr2 221373865 221374156 -31882427 + AluSc SINE Alu 1 290 -19 27 0 0 0 chr2 221374638 221374665 -31881918 + AT_rich Low_complexity Low_complexity 1 27 0 1246 260 23 20 chr2 221374931 221375285 -31881298 + L1MEc LINE L1 29 383 -6013 1181 264 28 8 chr2 221375282 221375638 -31880945 + L1MEc LINE L1 1690 2052 -4344 * 2007 191 68 102 chr2 221375637 221376196 -31880387 + L1MD1 LINE L1 14 553 -5987 2422 66 0 34 chr2 221376232 221376552 -31880031 - AluY SINE Alu -2 309 1 3996 259 32 9 chr2 221376701 221377992 -31878591 + L1MD1 LINE L1 4078 5397 -1143 239 110 55 22 chr2 221378924 221379015 -31877568 + (TA)n Simple_repeat Simple_repeat 2 95 0 1597 188 3 14 chr2 221379531 221379823 -31876760 + AluJb SINE Alu 1 289 -23 21 57 0 0 chr2 221380034 221380069 -31876514 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr2 221380118 221380142 -31876441 + AT_rich Low_complexity Low_complexity 1 24 0 3594 205 36 45 chr2 221380353 221380475 -31876108 + L1MD1 LINE L1 5516 5638 -998 3036 149 30 76 chr2 221380475 221381033 -31875550 - LTR26 LTR ERV1 0 603 76 2057 147 3 0 chr2 221381033 221381345 -31875238 - AluSq SINE Alu 0 313 1 3036 149 30 76 chr2 221381345 221381418 -31875165 - LTR26 LTR ERV1 -527 76 1 3594 205 36 45 chr2 221381418 221382419 -31874164 + L1MD1 LINE L1 5638 6635 -1 810 227 21 59 chr2 221382416 221382791 -31873792 + L1MEc LINE L1 2039 2399 -3997 * 451 206 156 0 chr2 221382811 221382952 -31873631 + L1M4 LINE L1 4803 4965 -1181 2054 239 0 47 chr2 221382960 221383424 -31873159 + MLT2B1 LTR ERVL 1 442 -78 365 0 0 22 chr2 221383424 221383470 -31873113 + (TG)n Simple_repeat Simple_repeat 2 46 0 4336 246 49 28 chr2 221383574 221384505 -31872078 + L1PB4 LINE L1 1867 2777 -4072 225 0 0 0 chr2 221384505 221384530 -31872053 + (CAAA)n Simple_repeat Simple_repeat 1 25 0 4336 246 49 28 chr2 221384530 221384613 -31871970 + L1PB4 LINE L1 2777 2857 -3992 2460 74 0 0 chr2 221384613 221384911 -31871672 + AluY SINE Alu 1 298 -13 4336 246 49 28 chr2 221384911 221386363 -31870220 + L1PB4 LINE L1 2857 4410 -2439 1213 185 0 0 chr2 221386388 221386615 -31869968 + L1PB4 LINE L1 5401 5627 -1222 * 4929 72 15 26 chr2 221386612 221387725 -31868858 + L1PA8 LINE L1 4685 5777 -395 1170 73 12 18 chr2 221387725 221387889 -31868694 + AluY SINE Alu 146 308 -3 2876 70 5 5 chr2 221387895 221388305 -31868278 + L1PA8 LINE L1 5769 6178 0 1251 165 19 9 chr2 221388306 221389399 -31867184 + L1PB4 LINE L1 5620 6845 -14 1251 7 0 0 chr2 221392181 221392322 -31864261 + AluYb8 SINE Alu 178 318 0 1867 140 82 14 chr2 221392806 221393162 -31863421 - L1MA4 LINE L1 -9 6291 5912 195 425 80 0 chr2 221393495 221393608 -31862975 - L2 LINE L2 0 3272 3151 1388 183 4 0 chr2 221393631 221393866 -31862717 - MER46A DNA MER2_type 0 236 1 205 333 111 8 chr2 221393961 221394078 -31862505 - L2 LINE L2 -212 3060 2932 27 29 0 0 chr2 221394812 221394846 -31861737 + AT_rich Low_complexity Low_complexity 1 34 0 2464 66 0 7 chr2 221394846 221395149 -31861434 - AluY SINE Alu -10 301 1 2016 146 3 3 chr2 221395259 221395567 -31861016 - AluSx SINE Alu -4 308 1 187 362 0 17 chr2 221396070 221396128 -31860455 + MIR3 SINE MIR 15 71 -137 430 301 92 7 chr2 221397080 221397233 -31859350 + MIR SINE MIR 97 262 0 1977 113 8 0 chr2 221397329 221397595 -31858988 + AluSg SINE Alu 24 291 -19 21 36 0 0 chr2 221397821 221397849 -31858734 + AT_rich Low_complexity Low_complexity 1 28 0 824 226 23 50 chr2 221399334 221399555 -31857028 + MER58C DNA MER1_type 1 215 0 13036 149 54 7 chr2 221399585 221401894 -31854689 + Tigger1 DNA MER2_type 1 2417 -1 1589 198 64 3 chr2 221402013 221402327 -31854256 + L1M1 LINE L1 13 345 -7220 4733 121 121 119 chr2 221402328 221403812 -31852771 - pTR5 LTR ERV1 0 2438 803 766 193 46 71 chr2 221403813 221404051 -31852532 + L1M1 LINE L1 282 513 -7052 26 50 0 0 chr2 221404638 221404678 -31851905 + AT_rich Low_complexity Low_complexity 1 40 0 2531 51 0 0 chr2 221404848 221405144 -31851439 - AluY SINE Alu -15 296 1 290 198 47 0 chr2 221405394 221405480 -31851103 + (TA)n Simple_repeat Simple_repeat 1 90 0 23 86 0 0 chr2 221406637 221406695 -31849888 + AT_rich Low_complexity Low_complexity 1 58 0 218 159 23 23 chr2 221406976 221407020 -31849563 + L2 LINE L2 3257 3300 -13 10986 132 9 1 chr2 221407755 221409673 -31846910 - L1P4 LINE L1 -615 5553 3620 345 299 79 45 chr2 221409957 221410134 -31846449 - MIR SINE MIR -6 256 74 30 77 0 0 chr2 221410348 221410413 -31846170 + AT_rich Low_complexity Low_complexity 1 65 0 28 0 0 0 chr2 221410999 221411027 -31845556 + AT_rich Low_complexity Low_complexity 1 28 0 228 217 130 0 chr2 221413044 221413113 -31843470 - MIR SINE MIR 0 262 185 2229 86 10 3 chr2 221413421 221413724 -31842859 - AluY SINE Alu -6 305 1 391 262 84 38 chr2 221413789 221414026 -31842557 - L1MEd LINE L1 -5286 833 586 2207 94 3 13 chr2 221415051 221415349 -31841234 - AluSg SINE Alu -15 295 1 395 269 102 61 chr2 221415541 221415616 -31840967 - MIR SINE MIR -6 256 186 4197 37 46 20 chr2 221415616 221416160 -31840423 + LTR6B LTR ERV1 1 558 0 395 269 102 61 chr2 221416160 221416281 -31840302 - MIR SINE MIR -76 186 52 296 322 100 67 chr2 221416463 221416733 -31839850 - L2 LINE L2 -177 3095 2817 4132 137 31 16 chr2 221417261 221417942 -31838641 - LTR8 LTR ERV1 0 691 1 21 36 0 0 chr2 221419087 221419115 -31837468 + AT_rich Low_complexity Low_complexity 1 28 0 904 249 9 14 chr2 221419329 221419542 -31837041 + MIR SINE MIR 9 220 -42 1222 288 64 27 chr2 221419851 221420441 -31836142 - L1MC4a LINE L1 -1789 6019 5408 939 208 112 67 chr2 221420441 221420712 -31835871 - MLT1C LTR MaLR -52 415 127 1600 129 0 19 chr2 221420712 221420968 -31835615 - AluSg1 SINE Alu -18 291 41 939 208 112 67 chr2 221420968 221421009 -31835574 - MLT1C LTR MaLR -340 127 89 294 189 38 0 chr2 221421011 221421064 -31835519 + Tigger5 DNA MER2_type 1 55 -2268 * 362 186 29 0 chr2 221421035 221421105 -31835478 + Tigger5 DNA MER2_type 2251 2322 -1 470 171 0 11 chr2 221421106 221421194 -31835389 - MLT1C LTR MaLR -380 87 1 414 271 25 0 chr2 221422010 221422132 -31834451 + LTR16A LTR ERVL 319 443 -7 189 0 0 0 chr2 221422135 221422156 -31834427 + (CAA)n Simple_repeat Simple_repeat 2 22 0 2099 125 3 10 chr2 221422169 221422481 -31834102 + AluSx SINE Alu 1 310 -2 799 190 3 162 chr2 221423654 221423938 -31832645 - MER8 DNA MER2_type 0 239 1 311 325 178 40 chr2 221423962 221424417 -31832166 + L1M4 LINE L1 4336 4853 -1293 2075 141 0 3 chr2 221424783 221425080 -31831503 - AluSq SINE Alu -17 296 1 201 352 114 55 chr2 221426394 221426613 -31829970 - L2 LINE L2 -830 2484 2253 324 303 107 22 chr2 221426897 221427094 -31829489 + MIR SINE MIR 4 225 -37 207 0 0 0 chr2 221427528 221427551 -31829032 + (TG)n Simple_repeat Simple_repeat 2 24 0 585 341 73 68 chr2 221428255 221428751 -31827832 + HAL1 LINE L1 24 521 -1986 1232 266 70 56 chr2 221428976 221429781 -31826802 + HAL1 LINE L1 848 1663 -844 239 273 0 0 chr2 221429792 221429847 -31826736 + GA-rich Low_complexity Low_complexity 4 58 0 472 281 18 12 chr2 221429920 221430084 -31826499 + LTR41 LTR ERVL 1 165 -608 521 332 19 9 chr2 221430746 221430960 -31825623 + HAL1 LINE L1 1694 1909 -598 2179 78 0 18 chr2 221430963 221431267 -31825316 + AluSc SINE Alu 3 301 0 22 35 0 0 chr2 221433350 221433379 -31823204 + AT_rich Low_complexity Low_complexity 1 29 0 861 149 68 19 chr2 221435478 221435639 -31820944 - AluJb SINE Alu -8 304 136 251 255 87 81 chr2 221436005 221436154 -31820429 + MIR SINE MIR 29 178 -84 2960 137 58 2 chr2 221436650 221437132 -31819451 + MER39B LTR ERV1 15 523 -130 749 231 0 6 chr2 221437162 221437318 -31819265 - FRAM SINE Alu -20 156 2 411 171 49 24 chr2 221437335 221437417 -31819166 + LTR29 LTR ERV1 539 622 0 2968 238 35 29 chr2 221438315 221439264 -31817319 + L1ME1 LINE L1 5177 6162 -4 2095 128 7 0 chr2 221440141 221440437 -31816146 + AluSx SINE Alu 6 303 -9 2477 59 0 3 chr2 221441126 221441432 -31815151 - AluY SINE Alu -6 305 1 234 23 70 0 chr2 221441782 221441825 -31814758 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 22 35 0 0 chr2 221441973 221442002 -31814581 + AT_rich Low_complexity Low_complexity 1 29 0 2284 88 10 0 chr2 221442213 221442519 -31814064 - AluY SINE Alu -2 309 1 2243 94 7 7 chr2 221442521 221442829 -31813754 - AluSp SINE Alu -5 308 1 21 36 0 0 chr2 221443064 221443092 -31813491 + AT_rich Low_complexity Low_complexity 1 28 0 362 347 14 35 chr2 221443983 221444127 -31812456 + MIR SINE MIR 52 192 -70 292 32 81 0 chr2 221444297 221444359 -31812224 + (TA)n Simple_repeat Simple_repeat 2 68 0 258 350 74 39 chr2 221444623 221444826 -31811757 - MIR SINE MIR -39 223 14 288 0 0 0 chr2 221446582 221446614 -31809969 + (T)n Simple_repeat Simple_repeat 1 32 0 279 0 0 0 chr2 221448021 221448052 -31808531 + (T)n Simple_repeat Simple_repeat 1 31 0 22 0 0 0 chr2 221448711 221448733 -31807850 + AT_rich Low_complexity Low_complexity 1 22 0 635 288 131 27 chr2 221449483 221449820 -31806763 + L3b LINE CR1 1102 1473 -110 264 149 21 0 chr2 221450199 221450246 -31806337 - L2 LINE L2 0 3313 3266 254 292 181 0 chr2 221450768 221450912 -31805671 - MIR SINE MIR -5 257 88 31 0 0 0 chr2 221451973 221452004 -31804579 + AT_rich Low_complexity Low_complexity 1 31 0 284 152 51 63 chr2 221452224 221452303 -31804280 - MLT1J1 LTR MaLR -22 424 347 2002 139 20 0 chr2 221452320 221452622 -31803961 - AluSx SINE Alu 0 312 5 1912 187 15 0 chr2 221453313 221453655 -31802928 + MER7A DNA MER2_type 1 345 -1 643 219 20 100 chr2 221454682 221454933 -31801650 + LTR12 LTR ERV1 238 468 -246 364 397 71 28 chr2 221455604 221456494 -31800089 - L2 LINE L2 0 3272 2229 6836 107 16 12 chr2 221456827 221457927 -31798656 + L1MA1 LINE L1 5198 6302 0 788 245 131 30 chr2 221459548 221459785 -31796798 + LTR16C LTR ERVL 231 491 0 580 218 31 129 chr2 221461667 221461892 -31794691 + MER58A DNA MER1_type 21 223 -1 329 316 226 16 chr2 221461893 221462083 -31794500 + MIR SINE MIR 33 262 0 210 238 0 0 chr2 221462714 221462756 -31793827 - L2 LINE L2 -3 3310 3269 44 76 0 8 chr2 221464173 221464188 -31792395 + AT_rich Low_complexity Low_complexity 1 15 -102 1507 172 31 31 chr2 221464188 221464479 -31792104 + AluJo SINE Alu 1 291 -21 44 76 0 8 chr2 221464479 221464581 -31792002 + AT_rich Low_complexity Low_complexity 15 117 0 21 0 0 0 chr2 221464994 221465015 -31791568 + AT_rich Low_complexity Low_complexity 1 21 0 221 216 78 0 chr2 221465698 221465749 -31790834 + L2 LINE L2 3254 3308 -5 24 53 0 0 chr2 221465877 221465915 -31790668 + AT_rich Low_complexity Low_complexity 1 38 0 2191 114 10 0 chr2 221466039 221466346 -31790237 + AluSx SINE Alu 1 310 -2 1287 230 146 56 chr2 221466469 221466913 -31789670 - MLT1D LTR MaLR -21 484 1 453 304 7 0 chr2 221467057 221467195 -31789388 - LTR33 LTR ERVL -10 511 373 498 289 28 55 chr2 221467267 221467485 -31789098 - LTR33 LTR ERVL -305 216 5 1209 67 0 0 chr2 221468670 221468819 -31787764 + AluSc SINE Alu 157 305 -4 1892 137 6 47 chr2 221469389 221469711 -31786872 + AluSx SINE Alu 1 309 -3 519 320 167 49 chr2 221470022 221470511 -31786072 + L2 LINE L2 2770 3313 0 305 305 69 52 chr2 221472626 221472794 -31783789 + MIR SINE MIR 38 203 -59 216 303 164 33 chr2 221472894 221473016 -31783567 + MER5A DNA MER1_type 50 187 -2 25 31 0 0 chr2 221473089 221473121 -31783462 + AT_rich Low_complexity Low_complexity 1 32 0 740 245 68 68 chr2 221474276 221474660 -31781923 - HAL1 LINE L1 -36 2471 2088 783 242 24 0 chr2 221474670 221474835 -31781748 - L1PB4 LINE L1 -5 6151 5983 * 1102 285 89 16 chr2 221474833 221475341 -31781242 - HAL1 LINE L1 -427 2080 1536 227 291 58 10 chr2 221475380 221475483 -31781100 - HAL1 LINE L1 -1945 562 455 427 351 87 6 chr2 221475484 221475840 -31780743 - HAL1 LINE L1 -2107 400 16 310 271 53 8 chr2 221475881 221476014 -31780569 - L1MC4 LINE L1 0 8042 7904 210 229 16 16 chr2 221476015 221476076 -31780507 + (TA)n Simple_repeat Simple_repeat 2 62 0 968 269 99 12 chr2 221476097 221476510 -31780073 - L1MC4 LINE L1 -150 7892 7444 205 223 43 128 chr2 221476778 221476817 -31779766 + MIR3 SINE MIR 120 161 -47 2361 11 4 0 chr2 221476817 221477083 -31779500 + AluYa5 SINE Alu 35 301 -10 205 223 43 128 chr2 221477083 221477137 -31779446 + MIR3 SINE MIR 161 205 -3 25 51 0 0 chr2 221477199 221477238 -31779345 + AT_rich Low_complexity Low_complexity 1 39 0 2306 103 3 0 chr2 221479279 221479590 -31776993 + AluSp SINE Alu 1 312 -1 204 363 51 45 chr2 221480018 221480175 -31776408 - L2 LINE L2 -2 3311 3154 563 335 246 17 chr2 221480293 221480318 -31776265 - L2 LINE L2 -499 2815 2797 353 301 49 0 chr2 221480318 221480441 -31776142 + MER94 DNA DNA 4 132 -2 563 335 246 17 chr2 221480441 221480944 -31775639 - L2 LINE L2 -517 2797 2166 184 324 81 14 chr2 221480937 221481011 -31775572 + L2 LINE L2 3218 3296 -17 * 2150 192 42 24 chr2 221481286 221481750 -31774833 + MLT1D LTR MaLR 1 333 -32 2367 108 28 0 chr2 221481750 221482111 -31774472 - L1PA12 LINE L1 -182 5986 5616 21 0 0 0 chr2 221482333 221482354 -31774229 + AT_rich Low_complexity Low_complexity 1 21 0 1518 104 36 0 chr2 221482431 221482653 -31773930 - MER30 DNA MER1_type 0 230 1 21 36 0 0 chr2 221483566 221483594 -31772989 + AT_rich Low_complexity Low_complexity 1 28 0 408 118 0 0 chr2 221485253 221485321 -31771262 + (CA)n Simple_repeat Simple_repeat 1 68 0 25 51 0 0 chr2 221486025 221486064 -31770519 + AT_rich Low_complexity Low_complexity 1 39 0 294 323 97 0 chr2 221487084 221487177 -31769406 - L2 LINE L2 -22 3250 3149 24 0 0 0 chr2 221487177 221487201 -31769382 + AT_rich Low_complexity Low_complexity 1 24 0 2816 6 0 0 chr2 221487576 221487887 -31768696 - AluYa5 SINE Alu 0 311 1 554 321 115 57 chr2 221488697 221489469 -31767114 + L2 LINE L2 1942 2758 -556 263 344 42 31 chr2 221489766 221489958 -31766625 + L2 LINE L2 3120 3313 0 2312 103 0 0 chr2 221492117 221492418 -31764165 - AluSx SINE Alu -11 301 1 25 65 0 0 chr2 221492545 221492591 -31763992 + AT_rich Low_complexity Low_complexity 1 46 0 1709 236 102 16 chr2 221492702 221493155 -31763428 + L1ME1 LINE L1 5670 6161 -5 1002 255 86 12 chr2 221493328 221493654 -31762929 - L1ME3A LINE L1 -5 6165 5816 844 237 127 0 chr2 221494061 221494289 -31762294 + MIR SINE MIR 3 259 -3 22 0 0 0 chr2 221495557 221495579 -31761004 + AT_rich Low_complexity Low_complexity 1 22 0 1958 117 0 4 chr2 221495671 221495952 -31760631 + AluSg SINE Alu 1 280 -30 1716 241 60 34 chr2 221497122 221497658 -31758925 - MLT1E3 LTR MaLR -74 550 1 1153 207 83 3 chr2 221498087 221498387 -31758196 + MER33 DNA MER1_type 1 324 0 204 428 23 8 chr2 221500537 221500668 -31755915 - L2 LINE L2 -4 3309 3177 960 284 153 39 chr2 221500754 221501373 -31755210 - L2 LINE L2 -819 2495 1806 355 345 56 32 chr2 221501377 221501661 -31754922 - L2 LINE L2 -752 2562 2272 37 23 0 0 chr2 221502778 221502822 -31753761 + AT_rich Low_complexity Low_complexity 1 44 0 397 293 138 4 chr2 221502932 221503157 -31753426 - L1MC4a LINE L1 -1875 5933 5679 21 0 0 0 chr2 221503705 221503726 -31752857 + AT_rich Low_complexity Low_complexity 1 21 0 258 143 0 0 chr2 221503790 221503839 -31752744 + (TC)n Simple_repeat Simple_repeat 2 50 0 277 286 14 0 chr2 221505863 221505933 -31750650 - MLT1J LTR MaLR -331 180 110 924 315 31 23 chr2 221506575 221506924 -31749659 - L2 LINE L2 -1142 2172 1821 2061 120 0 3 chr2 221509063 221509355 -31747228 + AluSx SINE Alu 1 291 -21 219 253 33 11 chr2 221511020 221511111 -31745472 + A-rich Low_complexity Low_complexity 5 97 0 190 313 75 30 chr2 221512590 221512657 -31743926 - MIR SINE MIR -122 86 17 1924 130 20 7 chr2 221513976 221514275 -31742308 + AluSq SINE Alu 1 303 -10 1549 132 4 0 chr2 221514842 221515070 -31741513 - AluSx SINE Alu -83 229 1 358 169 0 0 chr2 221515073 221515138 -31741445 - L1 LINE L1 -867 5279 5215 325 249 55 42 chr2 221515457 221515622 -31740961 - L1ME4a LINE L1 -49 6072 5906 236 348 86 16 chr2 221515746 221515933 -31740650 - L1MC4 LINE L1 -363 7679 7480 886 219 68 0 chr2 221517671 221517876 -31738707 + MER20 DNA MER1_type 1 219 0 8154 36 0 1 chr2 221518769 221519774 -31736809 - L1PA4 LINE L1 -927 5219 4216 7601 26 0 2 chr2 221519774 221520727 -31735856 + L1PA4 LINE L1 5205 6155 0 267 369 92 39 chr2 221521337 221521543 -31735040 + L3 LINE CR1 1308 1524 -53 2458 67 0 3 chr2 221521939 221522251 -31734332 - AluY SINE Alu 0 311 1 426 310 35 7 chr2 221522694 221522839 -31733744 - MIR SINE MIR -17 245 97 289 299 165 30 chr2 221524289 221524453 -31732130 + MER5A DNA MER1_type 4 189 0 255 31 0 0 chr2 221524769 221524801 -31731782 + (GA)n Simple_repeat Simple_repeat 2 33 0 4248 161 58 34 chr2 221526095 221527323 -31729260 - L1PA14 LINE L1 -297 5864 4610 4240 178 35 86 chr2 221527327 221528459 -31728124 - L1PA14 LINE L1 -3314 2832 1758 2376 74 3 0 chr2 221528568 221528866 -31727717 + AluSp SINE Alu 1 299 -14 460 323 91 14 chr2 221529654 221529874 -31726709 - MIR SINE MIR -17 245 9 662 258 112 0 chr2 221530271 221530449 -31726134 + MIR SINE MIR 40 237 -25 2260 105 0 0 chr2 221530784 221531079 -31725504 + AluSx SINE Alu 1 295 -17 29 28 0 0 chr2 221531624 221531660 -31724923 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr2 221532560 221532582 -31724001 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 221532963 221532985 -31723598 + AT_rich Low_complexity Low_complexity 1 22 0 573 171 0 17 chr2 221532988 221533105 -31723478 + AluJb SINE Alu 179 293 -19 238 135 0 0 chr2 221533313 221533365 -31723218 + LTR66 LTR ERVL 394 445 -165 240 218 0 0 chr2 221533382 221533437 -31723146 + (TA)n Simple_repeat Simple_repeat 2 56 0 491 185 0 50 chr2 221533442 221533561 -31723022 - MLT2B1 LTR ERVL -41 479 368 1528 177 49 14 chr2 221533697 221534047 -31722536 + L1MA9 LINE L1 5951 6312 0 1409 226 51 6 chr2 221536786 221537118 -31719465 - L1MD2 LINE L1 -1 6358 6012 224 232 0 14 chr2 221537679 221537748 -31718835 + (TA)n Simple_repeat Simple_repeat 2 69 0 24 0 0 0 chr2 221538491 221538515 -31718068 + AT_rich Low_complexity Low_complexity 1 24 0 355 219 25 50 chr2 221538732 221538851 -31717732 + L1ME3A LINE L1 6052 6167 -3 222 268 0 0 chr2 221539293 221539349 -31717234 - MIR SINE MIR -58 204 149 289 308 13 0 chr2 221539353 221539431 -31717152 + MIR SINE MIR 184 262 0 298 267 105 19 chr2 221539467 221539572 -31717011 - MIR SINE MIR -116 146 33 189 107 0 0 chr2 221540181 221540209 -31716374 + (T)n Simple_repeat Simple_repeat 1 28 0 273 286 43 92 chr2 221542218 221542403 -31714180 + MIR SINE MIR 72 247 -15 323 186 0 43 chr2 221543211 221543281 -31713302 + MER6 DNA MER2_type -65 1 -143 503 94 0 59 chr2 221543283 221543368 -31713215 + MER6 DNA MER2_type 738 817 -48 920 126 0 20 chr2 221543498 221543649 -31712934 + AluSg/x SINE Alu 165 312 0 215 100 50 0 chr2 221543652 221543692 -31712891 + A-rich Low_complexity Low_complexity 2 43 0 282 397 35 14 chr2 221543828 221543969 -31712614 + L2 LINE L2 3127 3270 -2 221 139 23 0 chr2 221543969 221544012 -31712571 + (TA)n Simple_repeat Simple_repeat 1 44 0 367 336 94 61 chr2 221544782 221545303 -31711280 + L3 LINE CR1 382 919 -658 737 346 105 28 chr2 221545484 221546056 -31710527 + L3 LINE CR1 956 1571 -6 22 0 0 0 chr2 221547066 221547088 -31709495 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 221547103 221547125 -31709458 + AT_rich Low_complexity Low_complexity 1 22 0 237 33 0 0 chr2 221547246 221547276 -31709307 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 732 67 0 0 chr2 221548458 221548548 -31708035 - 5S rRNA rRNA -31 90 1 249 33 0 0 chr2 221548586 221548616 -31707967 + (CA)n Simple_repeat Simple_repeat 2 31 0 242 377 50 13 chr2 221548637 221548796 -31707787 - MIR SINE MIR -70 192 28 383 391 11 22 chr2 221550471 221550655 -31705928 - L3 LINE CR1 -11 1566 1385 314 262 68 84 chr2 221550912 221551149 -31705434 + L1ME4a LINE L1 5701 5933 -188 41 82 0 0 chr2 221551163 221551260 -31705323 + AT_rich Low_complexity Low_complexity 1 97 0 15971 159 41 13 chr2 221551767 221553290 -31703293 - L1MA3 LINE L1 -6 7718 6239 1627 178 13 13 chr2 221553290 221553593 -31702990 - AluJb SINE Alu -9 303 1 15971 159 41 13 chr2 221553593 221558871 -31697712 - L1MA3 LINE L1 -1485 6239 734 16124 31 0 0 chr2 221658871 221661578 -31595005 + L1PA2 LINE L1 3444 6152 -3 230 264 0 0 chr2 221661585 221661638 -31594945 + MER112 DNA MER1_type 197 249 -11 251 344 156 29 chr2 221661711 221661987 -31594596 + L3 LINE CR1 98 408 -1169 533 242 23 23 chr2 221662069 221662201 -31594382 + MLT1J2 LTR MaLR 31 162 -288 2106 295 85 46 chr2 221662224 221662266 -31594317 + L2 LINE L2 1572 1611 -1703 1470 187 7 13 chr2 221662266 221662565 -31594018 - AluJo SINE Alu -15 297 1 2106 295 85 46 chr2 221662565 221663610 -31592973 + L2 LINE L2 1611 2701 -613 35 63 0 0 chr2 221664038 221664101 -31592482 + AT_rich Low_complexity Low_complexity 1 63 0 1534 193 0 61 chr2 221664741 221665068 -31591515 - AluJo SINE Alu -3 309 3 26 30 0 0 chr2 221665160 221665193 -31591390 + AT_rich Low_complexity Low_complexity 1 33 0 23577 39 44 5 chr2 221666679 221669682 -31586901 - L1P LINE L1 -3025 3121 2 298 237 10 72 chr2 221670345 221670442 -31586141 - L2 LINE L2 -50 3263 3173 243 0 0 0 chr2 221670938 221670965 -31585618 + (TG)n Simple_repeat Simple_repeat 2 28 0 619 325 173 16 chr2 221671789 221672112 -31584471 - L2 LINE L2 -9 3304 2931 1901 145 3 13 chr2 221672460 221672763 -31583820 + AluSx SINE Alu 1 300 -12 21 82 0 0 chr2 221673144 221673193 -31583390 + AT_rich Low_complexity Low_complexity 1 49 0 252 0 0 0 chr2 221674763 221674791 -31581792 + (CA)n Simple_repeat Simple_repeat 2 29 0 257 374 32 8 chr2 221675535 221675658 -31580925 + MIR SINE MIR 13 138 -124 189 0 0 0 chr2 221678241 221678262 -31578321 + (GAAAA)n Simple_repeat Simple_repeat 4 24 0 341 285 78 28 chr2 221678827 221679006 -31577577 + MIR SINE MIR 73 260 -2 1786 176 87 71 chr2 221679404 221679899 -31576684 - MLT1D LTR MaLR 0 505 3 250 123 0 62 chr2 221680012 221680077 -31576506 - LTR66 LTR ERVL -152 458 398 330 132 0 0 chr2 221680082 221680135 -31576448 + (TG)n Simple_repeat Simple_repeat 2 54 0 1308 313 94 26 chr2 221680172 221680870 -31575713 - L2 LINE L2 -250 3063 2315 1988 92 7 10 chr2 221680948 221681240 -31575343 - L1PA13 LINE L1 -13 6150 5860 284 295 23 0 chr2 221681258 221681363 -31575220 + MLT1J1 LTR MaLR 46 152 -294 362 291 15 30 chr2 221681566 221681700 -31574883 - L2 LINE L2 -995 2319 2188 26 0 0 0 chr2 221683274 221683300 -31573283 + AT_rich Low_complexity Low_complexity 1 26 0 27 0 0 0 chr2 221683325 221683352 -31573231 + AT_rich Low_complexity Low_complexity 1 27 0 1820 164 34 19 chr2 221683726 221684050 -31572533 - Tigger3(Golem) DNA MER2_type -3 3026 2698 356 233 27 0 chr2 221684053 221684126 -31572457 - Tigger3(Golem) DNA MER2_type -2954 75 1 220 179 0 0 chr2 221684126 221684165 -31572418 + (TG)n Simple_repeat Simple_repeat 2 40 0 2038 133 10 0 chr2 221684306 221684606 -31571977 - AluSx SINE Alu -9 303 1 219 333 0 15 chr2 221684938 221685004 -31571579 - MIR SINE MIR -108 154 90 372 279 62 56 chr2 221685175 221685498 -31571085 + L1ME4a LINE L1 5660 5984 -137 181 277 259 18 chr2 221685498 221685610 -31570973 + MIR SINE MIR 68 206 -56 21 57 0 0 chr2 221686039 221686074 -31570509 + AT_rich Low_complexity Low_complexity 1 35 0 279 291 13 0 chr2 221686265 221686344 -31570239 - MER94 DNA DNA -17 117 38 2076 189 57 68 chr2 221686919 221687479 -31569104 + MLT2B3 LTR ERVL 1 554 0 2157 128 0 0 chr2 221687553 221687858 -31568725 + AluSx SINE Alu 1 305 -7 182 114 0 29 chr2 221688008 221688043 -31568540 + (CCA)n Simple_repeat Simple_repeat 1 34 0 802 286 95 54 chr2 221688847 221689288 -31567295 + MLT1J LTR MaLR 1 459 -52 250 319 148 33 chr2 221689376 221689586 -31566997 - Charlie8 DNA MER1_type -2163 254 21 234 374 28 0 chr2 221690491 221690598 -31565985 - L2 LINE L2 0 3313 3204 7967 183 58 11 chr2 221691585 221693299 -31563284 + L1 LINE L1 3348 5141 -1005 2622 121 38 0 chr2 221693299 221693722 -31562861 + L1MA5A LINE L1 5849 6287 -10 312 307 42 46 chr2 221693780 221694021 -31562562 + L1MC/D LINE L1 5572 5811 -1997 493 312 19 7 chr2 221694133 221694287 -31562296 + MLT1H LTR MaLR 105 260 -289 39 68 0 0 chr2 221694713 221694787 -31561796 + AT_rich Low_complexity Low_complexity 1 74 0 256 161 28 35 chr2 221697051 221697194 -31559389 + (TTATA)n Simple_repeat Simple_repeat 5 146 0 366 336 0 9 chr2 221697548 221697655 -31558928 - L2 LINE L2 -8 3305 3200 415 285 168 11 chr2 221697733 221697782 -31558801 + L2 LINE L2 3107 3147 -166 185 0 0 39 chr2 221697782 221697808 -31558775 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 415 285 168 11 chr2 221697808 221697937 -31558646 + L2 LINE L2 3147 3313 0 24 32 0 0 chr2 221699113 221699144 -31557439 + AT_rich Low_complexity Low_complexity 1 31 0 397 279 184 6 chr2 221699178 221699336 -31557247 - MIR3 SINE MIR -8 200 15 310 351 24 12 chr2 221700578 221700746 -31555837 - L1ME3A LINE L1 -213 5957 5788 249 289 34 67 chr2 221700778 221700927 -31555656 + L2 LINE L2 3104 3247 -66 183 339 15 0 chr2 221700977 221701042 -31555541 + L2 LINE L2 2871 2936 -336 22 0 0 0 chr2 221702103 221702125 -31554458 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 221702294 221702316 -31554267 + AT_rich Low_complexity Low_complexity 1 22 0 2155 84 0 4 chr2 221702935 221703209 -31553374 + AluSq SINE Alu 22 294 -19 218 227 0 0 chr2 221703847 221703891 -31552692 + (TA)n Simple_repeat Simple_repeat 1 44 0 235 156 0 0 chr2 221703894 221703939 -31552644 + LTR66 LTR ERVL 394 438 -172 256 159 0 32 chr2 221704132 221704195 -31552388 + (TA)n Simple_repeat Simple_repeat 1 61 0 248 389 98 26 chr2 221704219 221704412 -31552171 + MIR SINE MIR 37 243 -19 393 213 24 118 chr2 221704525 221704652 -31551931 - MLT1L LTR MaLR -83 532 418 421 242 119 45 chr2 221704697 221704941 -31551642 - MLT1L LTR MaLR -340 275 14 1953 242 32 43 chr2 221707491 221708053 -31548530 - MER68 LTR ERV1 -6 556 1 22 0 0 0 chr2 221708076 221708098 -31548485 + AT_rich Low_complexity Low_complexity 1 22 0 527 322 133 0 chr2 221708538 221708808 -31547775 + L3b LINE CR1 1117 1422 -161 628 250 113 15 chr2 221708842 221709046 -31547537 + MIR SINE MIR 5 228 -34 300 262 32 79 chr2 221709370 221709496 -31547087 + Charlie7 DNA MER1_type 226 345 -2267 451 263 13 0 chr2 221710399 221710555 -31546028 + GA-rich Low_complexity Low_complexity 1 158 0 1476 236 98 55 chr2 221711088 221711350 -31545233 + Charlie7 DNA MER1_type 1 250 -2362 2593 94 8 3 chr2 221711350 221711712 -31544871 + THE1B LTR MaLR 1 364 0 1476 236 98 55 chr2 221711712 221712109 -31544474 + Charlie7 DNA MER1_type 250 689 -1923 33 0 0 0 chr2 221712900 221712933 -31543650 + AT_rich Low_complexity Low_complexity 1 33 0 21 36 0 0 chr2 221714030 221714058 -31542525 + AT_rich Low_complexity Low_complexity 1 28 0 305 340 0 10 chr2 221714089 221714189 -31542394 + L2 LINE L2 3173 3271 -1 198 0 0 0 chr2 221714706 221714728 -31541855 + (CA)n Simple_repeat Simple_repeat 1 22 0 21 0 0 0 chr2 221717972 221717993 -31538590 + AT_rich Low_complexity Low_complexity 1 21 0 1615 124 8 0 chr2 221718286 221718536 -31538047 + L1PA13 LINE L1 5893 6144 -19 1618 197 3 0 chr2 221719082 221719376 -31537207 - AluJo SINE Alu -17 295 1 689 169 73 101 chr2 221719497 221719716 -31536867 + L1MA7 LINE L1 5919 6131 -160 2177 145 37 5 chr2 221719716 221720095 -31536488 - LTR34 LTR ERV1 0 699 309 281 198 161 0 chr2 221720090 221720171 -31536412 - LTR34 LTR ERV1 -601 98 5 * 586 195 31 0 chr2 221720174 221720333 -31536250 + L1MA7 LINE L1 6128 6291 0 234 255 32 64 chr2 221720375 221720431 -31536152 + MIR SINE MIR 102 155 -107 2818 162 47 19 chr2 221720431 221721010 -31535573 + LTR49 LTR ERV1 1 595 0 234 255 32 64 chr2 221721010 221721047 -31535536 + MIR SINE MIR 155 192 -70 2081 114 0 3 chr2 221721128 221721418 -31535165 + AluSx SINE Alu 1 289 -23 522 46 0 0 chr2 221721430 221721495 -31535088 + (TG)n Simple_repeat Simple_repeat 2 66 0 232 295 107 0 chr2 221722601 221722723 -31533860 - MIR SINE MIR -47 215 81 353 96 58 0 chr2 221723091 221723143 -31533440 - MER30B DNA MER1_type -133 57 3 464 276 0 16 chr2 221723327 221723450 -31533133 - MIR SINE MIR -124 138 18 237 252 39 10 chr2 221725725 221725828 -31530755 + (TA)n Simple_repeat Simple_repeat 1 106 0 22 35 0 0 chr2 221726678 221726707 -31529876 + AT_rich Low_complexity Low_complexity 1 29 0 380 274 0 79 chr2 221727857 221728021 -31528562 - MER6 DNA MER2_type -1 864 -7 1731 274 73 56 chr2 221729723 221731188 -31525395 - L1ME3A LINE L1 -12 6158 4660 584 261 6 6 chr2 221731204 221731384 -31525199 + L1M4 LINE L1 4130 4309 -1837 655 215 0 0 chr2 221731384 221731505 -31525078 + L1PB4 LINE L1 6019 6139 -17 2353 42 0 7 chr2 221731764 221732084 -31524499 - AluY SINE Alu 0 318 1 24 77 0 0 chr2 221732372 221732424 -31524159 + AT_rich Low_complexity Low_complexity 1 52 0 249 57 0 0 chr2 221732547 221732582 -31524001 + (TG)n Simple_repeat Simple_repeat 2 36 0 2197 104 3 0 chr2 221734190 221734479 -31522104 - AluSx SINE Alu -22 290 1 534 88 48 0 chr2 221736106 221736231 -31520352 + (TA)n Simple_repeat Simple_repeat 2 132 0 354 208 20 50 chr2 221736231 221736332 -31520251 - L1MC4 LINE L1 -1337 6705 6608 1323 165 12 126 chr2 221736339 221736673 -31519910 - AluJb SINE Alu -6 296 1 23 54 0 0 chr2 221737197 221737234 -31519349 + AT_rich Low_complexity Low_complexity 1 37 0 244 230 14 14 chr2 221737854 221737928 -31518655 + MER116 DNA Mariner 7 80 0 252 231 0 0 chr2 221737983 221738035 -31518548 + LTR30 LTR ERV1 1 52 -670 3369 94 165 126 chr2 221738035 221738974 -31517609 + LTR12 LTR ERV1 57 714 0 768 173 0 0 chr2 221739854 221739987 -31516596 + FLAM_C SINE Alu 1 133 0 1225 144 24 19 chr2 221739998 221740206 -31516377 + AluSq SINE Alu 100 308 -5 272 136 0 15 chr2 221740339 221740405 -31516178 + (TA)n Simple_repeat Simple_repeat 2 66 0 999 111 0 7 chr2 221740654 221740798 -31515785 - AluSp/q SINE Alu -9 304 162 404 284 229 0 chr2 221740803 221741021 -31515562 + L2 LINE L2 2307 2574 -740 1606 97 0 0 chr2 221741209 221741426 -31515157 + AluY SINE Alu 69 285 -26 200 278 0 0 chr2 221741455 221741509 -31515074 + L2 LINE L2 2808 2861 -411 648 102 0 94 chr2 221742069 221742197 -31514386 + LTR9B LTR ERV1 445 560 -84 225 0 0 0 chr2 221742197 221742222 -31514361 + (A)n Simple_repeat Simple_repeat 1 25 0 656 206 48 0 chr2 221742772 221742898 -31513685 - FLAM_A SINE Alu -1 132 1 181 352 29 19 chr2 221744160 221744265 -31512318 + L2 LINE L2 2716 2821 -493 280 200 0 0 chr2 221744359 221744409 -31512174 + MIR SINE MIR 1 50 -212 292 238 0 16 chr2 221744740 221744803 -31511780 + L2 LINE L2 3202 3263 -9 23 33 0 0 chr2 221745903 221745933 -31510650 + AT_rich Low_complexity Low_complexity 1 30 0 206 256 73 37 chr2 221746067 221746149 -31510434 - L2 LINE L2 -1 3271 3187 555 224 9 0 chr2 221746404 221746520 -31510063 + FLAM_A SINE Alu 16 132 -10 283 295 101 22 chr2 221748375 221748514 -31508069 - L3 LINE CR1 -3 1574 1425 27 0 0 0 chr2 221748533 221748560 -31508023 + AT_rich Low_complexity Low_complexity 1 27 0 304 273 120 62 chr2 221748752 221748961 -31507622 - L1MD3 LINE L1 -2098 5897 5677 724 218 83 0 chr2 221749189 221749345 -31507238 + AluJb SINE Alu 136 304 -8 219 36 0 0 chr2 221750198 221750226 -31506357 + (A)n Simple_repeat Simple_repeat 1 28 0 240 100 0 0 chr2 221750629 221750669 -31505914 + (A)n Simple_repeat Simple_repeat 1 40 0 3086 178 52 3 chr2 221751092 221751666 -31504917 + MER7C DNA MER2_type 1 602 0 707 248 86 48 chr2 221752144 221752434 -31504149 + L1ME3 LINE L1 5848 6148 -14 1054 269 59 44 chr2 221752673 221753060 -31503523 + MLT1J LTR MaLR 116 508 -3 2048 129 0 0 chr2 221753440 221753751 -31502832 + AluSx SINE Alu 1 311 -1 316 327 46 28 chr2 221753823 221754040 -31502543 + L1ME LINE L1 4049 4269 -1877 1173 73 0 0 chr2 221754267 221754417 -31502166 - AluSp/q SINE Alu -8 305 156 299 311 264 10 chr2 221754544 221754737 -31501846 - MIR SINE MIR -7 255 14 627 316 87 28 chr2 221754916 221755413 -31501170 + L1ME LINE L1 5279 5804 -317 43 64 0 0 chr2 221755561 221755639 -31500944 + AT_rich Low_complexity Low_complexity 1 78 0 7639 144 23 19 chr2 221756114 221756872 -31499711 + HSMAR2 DNA Mariner 3 770 -532 1597 244 31 78 chr2 221756872 221757514 -31499069 + LTR9 LTR ERV1 1 612 0 7639 144 23 19 chr2 221757514 221758049 -31498534 + HSMAR2 DNA Mariner 770 1301 -1 23 0 0 0 chr2 221758071 221758094 -31498489 + AT_rich Low_complexity Low_complexity 1 23 0 4135 39 16 0 chr2 221758556 221759067 -31497516 + L1PA4 LINE L1 5630 6148 -7 26 0 0 0 chr2 221759067 221759093 -31497490 + AT_rich Low_complexity Low_complexity 1 26 0 214 239 15 15 chr2 221759615 221759682 -31496901 + (TAA)n Simple_repeat Simple_repeat 3 69 0 31 0 0 0 chr2 221759902 221759933 -31496650 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr2 221759990 221760011 -31496572 + (TTA)n Simple_repeat Simple_repeat 2 22 0 2139 110 0 0 chr2 221760013 221760303 -31496280 - AluSx SINE Alu -13 299 10 291 331 26 26 chr2 221760453 221760607 -31495976 + L1ME LINE L1 5453 5606 -556 497 287 39 8 chr2 221761304 221761433 -31495150 - MIR SINE MIR -126 136 4 233 290 60 10 chr2 221761622 221761722 -31494861 - L2 LINE L2 -536 2778 2674 756 297 81 23 chr2 221762448 221762797 -31493786 + MLT1I LTR MaLR 45 409 0 245 319 91 38 chr2 221765367 221765630 -31490953 - L2 LINE L2 -69 3244 2968 1713 248 106 35 chr2 221765655 221766336 -31490247 + HsTC2a DNA Tc2 1 729 -15 318 297 51 110 chr2 221766351 221766705 -31489878 - L2 LINE L2 -46 3267 2935 281 341 143 16 chr2 221766818 221767307 -31489276 - L2 LINE L2 -938 2376 1746 252 0 0 0 chr2 221767545 221767573 -31489010 + (TATTG)n Simple_repeat Simple_repeat 1 28 0 1961 139 4 0 chr2 221767573 221767854 -31488729 - AluSq SINE Alu -31 282 1 759 150 0 0 chr2 221768186 221768313 -31488270 + L1PB4 LINE L1 6030 6156 0 2119 102 16 13 chr2 221769209 221769512 -31487071 - AluSg SINE Alu -6 304 1 279 0 0 0 chr2 221773067 221773098 -31483485 + (TG)n Simple_repeat Simple_repeat 1 31 0 210 37 0 0 chr2 221773100 221773127 -31483456 + (GA)n Simple_repeat Simple_repeat 2 28 0 31 0 0 0 chr2 221773467 221773498 -31483085 + AT_rich Low_complexity Low_complexity 1 31 0 198 266 0 0 chr2 221773626 221773705 -31482878 + (TA)n Simple_repeat Simple_repeat 1 79 0 22 0 0 0 chr2 221775073 221775095 -31481488 + AT_rich Low_complexity Low_complexity 1 22 0 211 59 88 0 chr2 221775784 221775818 -31480765 - MIR SINE MIR -113 149 113 29 28 0 0 chr2 221776715 221776751 -31479832 + AT_rich Low_complexity Low_complexity 1 36 0 306 300 130 0 chr2 221777541 221777641 -31478942 + MIR3 SINE MIR 89 201 -7 30 27 0 0 chr2 221777966 221778003 -31478580 + AT_rich Low_complexity Low_complexity 1 37 0 25 0 0 0 chr2 221778084 221778109 -31478474 + AT_rich Low_complexity Low_complexity 1 25 0 395 297 52 32 chr2 221778895 221779050 -31477533 + MIR SINE MIR 5 162 -100 2243 199 27 93 chr2 221779051 221779643 -31476940 + MLT2B3 LTR ERVL 2 554 0 212 234 149 32 chr2 221779643 221779737 -31476846 + MIR SINE MIR 158 262 0 2309 119 11 24 chr2 221781312 221781689 -31474894 - THE1C LTR MaLR -2 373 2 322 373 47 6 chr2 221782020 221782189 -31474394 - MIR SINE MIR -36 226 51 856 233 10 5 chr2 221782271 221782477 -31474106 - MER3 DNA MER1_type 0 209 3 22 0 0 0 chr2 221782506 221782528 -31474055 + AT_rich Low_complexity Low_complexity 1 22 0 2273 100 0 0 chr2 221783498 221783798 -31472785 + AluY SINE Alu 1 300 -11 242 0 61 0 chr2 221783815 221783848 -31472735 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 198 0 0 0 chr2 221785546 221785568 -31471015 + (T)n Simple_repeat Simple_repeat 1 22 0 272 211 66 13 chr2 221785768 221785844 -31470739 - MIR SINE MIR -74 188 109 881 175 0 0 chr2 221786165 221786351 -31470232 - AluJb SINE Alu 0 326 141 239 137 0 20 chr2 221787888 221787939 -31468644 + (TA)n Simple_repeat Simple_repeat 2 51 0 330 175 10 82 chr2 221787948 221788045 -31468538 - L1MC4 LINE L1 -1339 6703 6614 810 195 26 0 chr2 221788547 221788701 -31467882 - MER5A DNA MER1_type -6 183 26 24 53 0 0 chr2 221790323 221790361 -31466222 + AT_rich Low_complexity Low_complexity 1 38 0 521 73 0 0 chr2 221790415 221790497 -31466086 - AluSp/q SINE Alu 0 313 232 2364 89 0 3 chr2 221791994 221792297 -31464286 + AluSc SINE Alu 1 302 -7 1568 270 140 12 chr2 221792573 221793174 -31463409 + L2 LINE L2 2109 2786 -528 541 222 26 9 chr2 221793190 221793452 -31463131 + MER33 DNA MER1_type 1 316 -8 499 311 98 58 chr2 221793487 221793863 -31462720 + L2 LINE L2 2906 3296 -17 1341 335 103 6 chr2 221793906 221794438 -31462145 + MER115 DNA AcHobo 110 693 0 536 310 95 37 chr2 221796415 221796657 -31459926 + MIR SINE MIR 5 260 -2 1163 48 7 0 chr2 221797083 221797229 -31459354 + L1PA7 LINE L1 6004 6150 -4 231 114 0 0 chr2 221797303 221797338 -31459245 + (A)n Simple_repeat Simple_repeat 1 35 0 981 272 113 20 chr2 221799353 221799750 -31456833 + MER57B LTR ERV1 1 434 0 306 0 0 0 chr2 221799868 221799902 -31456681 + (TG)n Simple_repeat Simple_repeat 2 35 0 23 54 0 0 chr2 221799964 221800001 -31456582 + AT_rich Low_complexity Low_complexity 1 37 0 276 339 154 0 chr2 221800290 221800420 -31456163 + MIR SINE MIR 1 150 -112 23 0 0 0 chr2 221800555 221800578 -31456005 + AT_rich Low_complexity Low_complexity 1 23 0 1475 197 21 3 chr2 221800678 221800968 -31455615 - AluJo SINE Alu -17 295 1 2337 139 5 3 chr2 221800971 221801339 -31455244 + MLT1B LTR MaLR 22 390 0 556 294 112 0 chr2 221801339 221801536 -31455047 + MIR SINE MIR 44 262 0 22 35 0 0 chr2 221802004 221802033 -31454550 + AT_rich Low_complexity Low_complexity 1 29 0 294 280 111 21 chr2 221802356 221802485 -31454098 - MIR SINE MIR -42 166 34 282 148 0 0 chr2 221802944 221802998 -31453585 + (TCCA)n Simple_repeat Simple_repeat 1 54 0 409 327 9 0 chr2 221802999 221803112 -31453471 - L2 LINE L2 -2 3270 3157 225 314 129 16 chr2 221803588 221803712 -31452871 - L2 LINE L2 -2 3270 3133 1453 230 23 58 chr2 221803933 221804368 -31452215 + L1MC5 LINE L1 6687 7106 -855 1764 200 25 0 chr2 221804372 221804687 -31451896 - MLT1A1 LTR MaLR 0 365 43 658 191 23 29 chr2 221804747 221804920 -31451663 + L1MC3 LINE L1 7614 7785 0 * 675 259 38 100 chr2 221804916 221805023 -31451560 + L1MC5 LINE L1 7155 7267 -694 888 259 158 32 chr2 221805023 221805433 -31451150 + LTR40b LTR ERVL 1 462 0 675 259 38 100 chr2 221805433 221805695 -31450888 + L1MC5 LINE L1 7267 7501 -460 336 318 20 36 chr2 221805807 221806002 -31450581 + L1ME3A LINE L1 5962 6153 -17 200 344 162 24 chr2 221806294 221806713 -31449870 - L2 LINE L2 -466 2848 2372 836 146 14 127 chr2 221806960 221807180 -31449403 + MER20 DNA MER1_type 1 195 -24 25 51 0 0 chr2 221807321 221807360 -31449223 + AT_rich Low_complexity Low_complexity 1 39 0 205 128 43 0 chr2 221807446 221807493 -31449090 + CT-rich Low_complexity Low_complexity 1 49 0 189 0 0 0 chr2 221809488 221809509 -31447074 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 22 43 0 21 chr2 221809744 221809767 -31446816 + AT_rich Low_complexity Low_complexity 1 23 -23 1590 199 0 7 chr2 221809767 221810068 -31446515 + AluJo SINE Alu 1 299 -13 22 43 0 21 chr2 221810068 221810091 -31446492 + AT_rich Low_complexity Low_complexity 23 46 0 2198 102 0 0 chr2 221810091 221810375 -31446208 - AluSg SINE Alu -24 286 3 197 377 20 75 chr2 221810715 221810861 -31445722 + L2 LINE L2 3127 3264 -8 270 354 31 0 chr2 221811029 221811125 -31445458 - L2 LINE L2 0 3313 3215 7578 198 20 5 chr2 221813554 221815132 -31441451 - L1PA13 LINE L1 -2815 3331 1731 3010 158 32 11 chr2 221815125 221815662 -31440921 + L1PA13 LINE L1 3361 3908 -2238 * 6725 168 3 20 chr2 221815663 221817043 -31439540 + L1PA13 LINE L1 4044 5402 -761 2365 85 0 0 chr2 221817043 221817337 -31439246 - AluY SINE Alu -17 294 1 6725 168 3 20 chr2 221817337 221818068 -31438515 + L1PA13 LINE L1 5402 6144 -19 185 159 23 0 chr2 221818181 221818225 -31438358 + GA-rich Low_complexity Low_complexity 3 47 0 292 324 93 36 chr2 221818287 221818426 -31438157 + MIR3 SINE MIR 48 194 -14 662 206 6 46 chr2 221818441 221818616 -31437967 + AluJb SINE Alu 133 300 -12 21 0 0 0 chr2 221818759 221818780 -31437803 + AT_rich Low_complexity Low_complexity 1 21 0 1487 202 11 3 chr2 221818828 221819110 -31437473 - AluJo SINE Alu -20 292 9 24 0 0 0 chr2 221820490 221820514 -31436069 + AT_rich Low_complexity Low_complexity 1 24 0 187 271 21 0 chr2 221820737 221820785 -31435798 + MIR SINE MIR 68 116 -146 243 0 0 0 chr2 221821368 221821395 -31435188 + (A)n Simple_repeat Simple_repeat 1 27 0 1216 164 3 76 chr2 221821409 221821726 -31434857 + AluSq SINE Alu 5 298 -15 516 105 0 0 chr2 221822217 221822293 -31434290 + (TCTA)n Simple_repeat Simple_repeat 1 76 0 724 201 49 7 chr2 221822299 221822443 -31434140 - FRAM SINE Alu -29 147 1 206 370 54 0 chr2 221823596 221823688 -31432895 + L2 LINE L2 3179 3275 -38 1377 287 64 14 chr2 221824519 221825080 -31431503 - Charlie7 DNA MER1_type -1815 797 209 33 43 0 0 chr2 221825878 221825925 -31430658 + AT_rich Low_complexity Low_complexity 1 47 0 27 0 0 0 chr2 221825976 221826003 -31430580 + AT_rich Low_complexity Low_complexity 1 27 0 226 349 94 16 chr2 221826191 221826433 -31430150 - L2 LINE L2 -266 3047 2784 228 239 22 139 chr2 221826478 221826658 -31429925 + LTR37A LTR ERV1 19 177 -249 245 326 122 25 chr2 221826904 221827272 -31429311 - L2 LINE L2 -530 2784 2381 1294 206 25 117 chr2 221827799 221828201 -31428382 - MLT1A1 LTR MaLR 0 365 1 323 376 74 20 chr2 221828351 221828500 -31428083 + L2 LINE L2 3100 3256 -16 1563 113 60 36 chr2 221828592 221828840 -31427743 - AluSq SINE Alu -15 298 45 194 173 0 19 chr2 221829111 221829163 -31427420 + GA-rich Low_complexity Low_complexity 2 52 0 47 73 0 0 chr2 221829512 221829608 -31426975 + AT_rich Low_complexity Low_complexity 1 96 0 1723 206 83 16 chr2 221829747 221830180 -31426403 + MLT1C LTR MaLR 6 467 0 349 298 0 0 chr2 221830205 221830289 -31426294 - MIR SINE MIR -73 135 52 284 265 175 53 chr2 221830437 221830626 -31425957 + MIR SINE MIR 30 241 -21 1990 154 0 0 chr2 221830895 221831201 -31425382 + AluSx SINE Alu 5 310 -2 22 35 0 0 chr2 221831218 221831247 -31425336 + AT_rich Low_complexity Low_complexity 1 29 0 235 313 0 12 chr2 221831346 221831426 -31425157 + GA-rich Low_complexity Low_complexity 3 81 0 488 309 70 26 chr2 221832080 221832310 -31424273 + MIR SINE MIR 9 248 -14 25 51 0 0 chr2 221833323 221833362 -31423221 + AT_rich Low_complexity Low_complexity 1 39 0 315 65 0 0 chr2 221834364 221834410 -31422173 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 27 49 0 0 chr2 221834749 221834790 -31421793 + AT_rich Low_complexity Low_complexity 1 41 0 30 45 0 0 chr2 221834838 221834882 -31421701 + AT_rich Low_complexity Low_complexity 1 44 0 354 211 229 69 chr2 221834982 221835157 -31421426 - L2 LINE L2 0 3313 3111 1013 86 0 0 chr2 221835862 221836001 -31420582 - THE1A-int LTR MaLR -1441 139 1 2319 91 28 0 chr2 221836035 221836355 -31420228 - THE1A LTR MaLR -26 329 1 280 136 15 15 chr2 221836355 221836421 -31420162 + GA-rich Low_complexity Low_complexity 1 66 0 1552 211 20 53 chr2 221836933 221837332 -31419251 + MLT1B LTR MaLR 1 386 -4 37 52 0 0 chr2 221837760 221837818 -31418765 + AT_rich Low_complexity Low_complexity 1 58 0 313 71 54 0 chr2 221837944 221838000 -31418583 + (TCTA)n Simple_repeat Simple_repeat 3 61 0 1263 211 36 43 chr2 221838005 221838285 -31418298 - AluJo SINE Alu -34 278 1 681 149 35 0 chr2 221839307 221839421 -31417162 - FLAM_C SINE Alu -15 118 1 221 320 13 13 chr2 221839607 221839685 -31416898 + L2 LINE L2 3004 3081 -191 25 0 0 0 chr2 221840440 221840465 -31416118 + AT_rich Low_complexity Low_complexity 1 25 0 30666 64 3 10 chr2 221841393 221847332 -31409251 - L1PA5 LINE L1 -218 5936 7 2020 124 37 0 chr2 221848348 221848646 -31407937 - AluSc SINE Alu 0 309 1 466 308 53 57 chr2 221848757 221848984 -31407599 + MIR SINE MIR 18 243 -19 21 0 0 0 chr2 221849013 221849034 -31407549 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 221849203 221849232 -31407351 + AT_rich Low_complexity Low_complexity 1 29 0 203 224 35 0 chr2 221849606 221849664 -31406919 + A-rich Low_complexity Low_complexity 1 60 0 321 297 20 30 chr2 221849842 221849943 -31406640 - MIR3 SINE MIR -10 198 99 263 216 216 14 chr2 221850767 221850915 -31405668 - L1MC5 LINE L1 -299 7662 7485 473 0 18 0 chr2 221850930 221850987 -31405596 + (TG)n Simple_repeat Simple_repeat 2 59 0 3037 198 99 30 chr2 221852303 221853173 -31403410 + MER57-int LTR ERV1 2788 3717 -1219 1953 241 57 27 chr2 221853168 221853784 -31402799 + MER57-int LTR ERV1 3576 4603 -412 * 1625 250 122 11 chr2 221853809 221854253 -31402330 + MER57-int LTR ERV1 6614 7106 -431 2378 164 30 61 chr2 221854266 221854791 -31401792 + LTR54 LTR ERV1 1 509 -1 1421 136 5 0 chr2 221854889 221855095 -31401488 + THE1B LTR MaLR 158 364 0 4482 231 54 19 chr2 221855095 221855777 -31400806 + L1M4 LINE L1 3712 4369 -1777 1375 209 10 23 chr2 221855777 221856079 -31400504 + AluJo SINE Alu 1 298 -14 4482 231 54 19 chr2 221856079 221856731 -31399852 + L1M4 LINE L1 4369 5093 -1053 21 71 0 0 chr2 221856877 221856919 -31399664 + AT_rich Low_complexity Low_complexity 1 42 0 479 259 72 24 chr2 221857835 221858001 -31398582 - MIR SINE MIR -25 237 64 340 276 54 49 chr2 221858668 221858853 -31397730 - L2 LINE L2 -10 3303 3118 216 0 0 0 chr2 221858882 221858906 -31397677 + (CAA)n Simple_repeat Simple_repeat 2 25 0 183 303 56 22 chr2 221859295 221859384 -31397199 - L2 LINE L2 -658 2656 2565 600 286 0 0 chr2 221859508 221859648 -31396935 - LTR33 LTR ERVL -359 162 23 239 315 54 0 chr2 221860684 221860776 -31395807 + MER5A DNA MER1_type 87 183 -6 23 0 0 0 chr2 221861271 221861294 -31395289 + AT_rich Low_complexity Low_complexity 1 23 0 203 308 62 77 chr2 221862346 221862619 -31393964 - L2 LINE L2 0 3313 3045 303 388 8 0 chr2 221862751 221862993 -31393590 + L1M4 LINE L1 5156 5399 -747 205 273 13 27 chr2 221864151 221864301 -31392282 + (TTA)n Simple_repeat Simple_repeat 1 148 0 252 225 90 27 chr2 221864301 221864412 -31392171 - L1MB8 LINE L1 -247 5931 5814 333 274 192 34 chr2 221864441 221864649 -31391934 - L1MB8 LINE L1 -341 5780 5540 2108 99 48 3 chr2 221865438 221865731 -31390852 + AluSc SINE Alu 1 306 -3 534 368 64 20 chr2 221868508 221868946 -31387637 + L3 LINE CR1 321 777 -800 286 276 0 40 chr2 221869985 221870061 -31386522 + MIR SINE MIR 5 77 -185 228 374 41 16 chr2 221870262 221870385 -31386198 + MIR SINE MIR 17 142 -66 375 250 25 0 chr2 221870528 221870608 -31385975 + LTR52 LTR ERVL 321 402 -19 24 53 0 0 chr2 221870631 221870669 -31385914 + AT_rich Low_complexity Low_complexity 1 38 0 226 315 46 31 chr2 221871123 221871253 -31385330 + MIR SINE MIR 129 260 -2 256 376 10 0 chr2 221871925 221872026 -31384557 - MIR3 SINE MIR -53 155 54 258 32 0 0 chr2 221872554 221872585 -31383998 + (CA)n Simple_repeat Simple_repeat 2 32 0 300 264 0 14 chr2 221872843 221872915 -31383668 + L2 LINE L2 3201 3271 -1 838 235 59 15 chr2 221873210 221873414 -31383169 + MIR SINE MIR 50 262 0 390 280 28 73 chr2 221874215 221874433 -31382150 - L2 LINE L2 0 3313 3106 2088 182 44 5 chr2 221874788 221875200 -31381383 + MSTA LTR MaLR 1 428 0 285 286 22 33 chr2 221876003 221876094 -31380489 - MER5B DNA MER1_type -6 172 83 1612 64 36 0 chr2 221878139 221878359 -31378224 + L1PA7 LINE L1 5923 6150 -4 204 250 94 31 chr2 221878407 221878471 -31378112 + MIR3 SINE MIR 100 167 -41 324 300 25 25 chr2 221878627 221878747 -31377836 - MIR SINE MIR -24 238 119 186 43 0 0 chr2 221878776 221878799 -31377784 + (CAA)n Simple_repeat Simple_repeat 2 24 0 474 319 35 24 chr2 221878956 221879125 -31377458 + MIR SINE MIR 34 204 -58 23 54 0 0 chr2 221879355 221879392 -31377191 + AT_rich Low_complexity Low_complexity 1 37 0 835 175 119 6 chr2 221879455 221879632 -31376951 + MSTB LTR MaLR 1 197 -229 232 115 0 33 chr2 221879634 221879695 -31376888 + (TAAAA)n Simple_repeat Simple_repeat 1 59 0 27 29 0 0 chr2 221879939 221879973 -31376610 + AT_rich Low_complexity Low_complexity 1 34 0 1394 176 13 0 chr2 221879973 221880212 -31376371 + MSTB LTR MaLR 185 426 0 2615 38 0 10 chr2 221881042 221881355 -31375228 + AluY SINE Alu 1 310 -1 188 319 43 0 chr2 221882447 221882516 -31374067 - L2 LINE L2 -8 3305 3234 474 339 136 14 chr2 221883009 221883378 -31373205 - L2 LINE L2 -1193 2121 1708 1258 93 11 0 chr2 221883488 221883670 -31372913 + L1PA4 LINE L1 5970 6153 -2 338 353 29 14 chr2 221883814 221883953 -31372630 - MIR SINE MIR -10 252 112 35 41 0 0 chr2 221884479 221884528 -31372055 + AT_rich Low_complexity Low_complexity 1 49 0 25 0 0 0 chr2 221884737 221884762 -31371821 + AT_rich Low_complexity Low_complexity 1 25 0 21 57 0 0 chr2 221885402 221885437 -31371146 + AT_rich Low_complexity Low_complexity 1 35 0 1968 108 28 7 chr2 221888252 221888540 -31368043 + AluSq SINE Alu 1 294 -19 231 36 0 0 chr2 221888540 221888568 -31368015 + (GA)n Simple_repeat Simple_repeat 1 28 0 1032 134 0 0 chr2 221888571 221888742 -31367841 + (GAAA)n Simple_repeat Simple_repeat 4 174 0 881 158 0 29 chr2 221888929 221889100 -31367483 + MER51A LTR ERV1 3 168 -466 27 0 0 0 chr2 221889108 221889135 -31367448 + AT_rich Low_complexity Low_complexity 1 27 0 576 328 28 24 chr2 221889249 221889502 -31367081 + MIR SINE MIR 9 262 0 23 54 0 0 chr2 221890232 221890269 -31366314 + AT_rich Low_complexity Low_complexity 1 37 0 215 170 21 0 chr2 221890290 221890337 -31366246 + (TA)n Simple_repeat Simple_repeat 1 48 0 220 350 137 0 chr2 221890987 221891104 -31365479 - L2 LINE L2 -260 3053 2921 755 156 8 16 chr2 221891279 221891407 -31365176 + FLAM_C SINE Alu 1 127 -16 21 36 0 0 chr2 221891714 221891742 -31364841 + AT_rich Low_complexity Low_complexity 1 28 0 433 232 55 61 chr2 221892320 221892501 -31364082 + MER104 DNA MER2_type 1 180 0 257 318 11 0 chr2 221892545 221892633 -31363950 - MIR SINE MIR 0 262 174 22 35 0 0 chr2 221893314 221893343 -31363240 + AT_rich Low_complexity Low_complexity 1 29 0 255 262 0 60 chr2 221893397 221893481 -31363102 + L2 LINE L2 3193 3271 -1 180 179 0 26 chr2 221893946 221893985 -31362598 + L2 LINE L2 3276 3313 0 1192 217 108 54 chr2 221894633 221895057 -31361526 + MLT1C LTR MaLR 21 467 0 186 43 0 0 chr2 221895850 221895873 -31360710 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 3674 97 30 32 chr2 221895874 221896786 -31359797 - MER11A LTR ERVK -159 1107 1 288 145 32 32 chr2 221896798 221896860 -31359723 + MER3 DNA MER1_type 148 209 0 * 582 159 0 0 chr2 221896860 221896907 -31359676 - MER3 DNA MER1_type -162 47 1 1913 157 3 0 chr2 221896944 221897244 -31359339 + AluSx SINE Alu 1 301 -11 725 219 31 71 chr2 221897246 221897430 -31359153 - L1MC5 LINE L1 -675 7286 7096 180 0 0 0 chr2 221897430 221897450 -31359133 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 725 219 31 71 chr2 221897450 221897886 -31358697 - L1MC5 LINE L1 -865 7096 6625 1801 160 10 0 chr2 221897891 221898184 -31358399 - AluSg1 SINE Alu -9 300 5 207 0 0 0 chr2 221898191 221898214 -31358369 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1369 209 7 3 chr2 221898213 221898520 -31358063 - AluJb SINE Alu 0 308 1 1397 158 0 0 chr2 221898529 221898744 -31357839 - AluSg/x SINE Alu -9 303 89 1008 218 64 4 chr2 221898967 221899201 -31357382 + MLT1C LTR MaLR 65 312 -155 402 185 0 0 chr2 221899230 221899295 -31357288 - FRAM/FAM SINE Alu -110 66 2 676 184 14 20 chr2 221899299 221899446 -31357137 + MLT1C LTR MaLR 322 467 0 2103 81 0 14 chr2 221900386 221900517 -31356066 + AluY SINE Alu 1 132 -180 603 0 0 0 chr2 221900517 221900584 -31355999 + (TA)n Simple_repeat Simple_repeat 2 68 0 2103 81 0 14 chr2 221900584 221900768 -31355815 + AluY SINE Alu 132 312 0 29 47 0 0 chr2 221901611 221901654 -31354929 + AT_rich Low_complexity Low_complexity 1 43 0 24 0 0 0 chr2 221901939 221901963 -31354620 + AT_rich Low_complexity Low_complexity 1 24 0 333 289 147 6 chr2 221902252 221902408 -31354175 + MIR SINE MIR 85 262 0 25 0 0 0 chr2 221902485 221902510 -31354073 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr2 221903055 221903076 -31353507 + AT_rich Low_complexity Low_complexity 1 21 0 317 323 0 8 chr2 221904278 221904402 -31352181 - LTR33 LTR ERVL -10 511 389 506 209 9 9 chr2 221904506 221904616 -31351967 - LTR33 LTR ERVL -392 129 20 2002 123 19 3 chr2 221904952 221905260 -31351323 + AluSq SINE Alu 1 313 0 231 188 0 0 chr2 221905260 221905308 -31351275 + GA-rich Low_complexity Low_complexity 3 50 0 5925 101 14 14 chr2 221906811 221908178 -31348405 + L1PA10 LINE L1 4760 6168 0 292 359 159 0 chr2 221910338 221910533 -31346050 + MIR SINE MIR 25 250 -12 242 308 7 82 chr2 221911377 221911523 -31345060 + MIR SINE MIR 82 216 -46 180 219 0 0 chr2 221911656 221911697 -31344886 + L2 LINE L2 3273 3313 0 23 0 0 0 chr2 221911810 221911833 -31344750 + AT_rich Low_complexity Low_complexity 1 23 0 25 102 0 0 chr2 221912401 221912489 -31344094 + AT_rich Low_complexity Low_complexity 1 88 0 2366 161 22 44 chr2 221914366 221914863 -31341720 + MER66B LTR ERV1 1 486 0 220 324 21 90 chr2 221915410 221915555 -31341028 - MER91C DNA MER1_type -5 135 1 198 308 109 43 chr2 221915649 221915925 -31340658 + L2 LINE L2 2487 2780 -534 1065 300 108 10 chr2 221915947 221916337 -31340246 - LTR16C LTR ERVL 0 491 64 22 0 0 0 chr2 221916781 221916803 -31339780 + AT_rich Low_complexity Low_complexity 1 22 0 209 277 64 11 chr2 221916818 221916912 -31339671 + MIR SINE MIR 164 262 0 277 263 64 83 chr2 221916930 221917069 -31339514 - MER5A DNA MER1_type -28 161 24 510 276 0 0 chr2 221917069 221917203 -31339380 - MER94 DNA DNA 0 134 1 277 263 64 83 chr2 221917203 221917219 -31339364 - MER5A DNA MER1_type -165 24 9 21 0 0 0 chr2 221918071 221918092 -31338491 + AT_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr2 221918809 221918836 -31337747 + AT_rich Low_complexity Low_complexity 1 27 0 437 318 50 40 chr2 221919182 221919380 -31337203 + MIR SINE MIR 12 211 -51 229 358 53 0 chr2 221920601 221920696 -31335887 + L2 LINE L2 2688 2787 -527 272 273 131 0 chr2 221921141 221921240 -31335343 + L2 LINE L2 3142 3253 -19 2261 80 0 7 chr2 221921937 221922236 -31334347 - AluY SINE Alu -14 297 1 230 68 51 34 chr2 221922578 221922637 -31333946 + (TTTG)n Simple_repeat Simple_repeat 2 61 0 211 406 89 0 chr2 221924551 221924674 -31331909 - L2 LINE L2 -2 3270 3137 422 304 74 0 chr2 221925076 221925224 -31331359 - MIR SINE MIR 0 262 104 255 61 0 0 chr2 221925309 221925342 -31331241 + (GAAAA)n Simple_repeat Simple_repeat 3 35 0 500 278 63 29 chr2 221926541 221926746 -31329837 + MIR SINE MIR 20 231 -31 656 291 50 8 chr2 221929237 221929473 -31327110 + MIR SINE MIR 21 261 -1 1917 144 6 26 chr2 221930719 221931032 -31325551 + AluSx SINE Alu 1 307 -5 436 306 56 12 chr2 221931770 221931930 -31324653 - MIR3 SINE MIR -5 203 37 1787 144 3 41 chr2 221933005 221933325 -31323258 - AluSx SINE Alu 0 309 1 21 36 0 0 chr2 221933329 221933357 -31323226 + AT_rich Low_complexity Low_complexity 1 28 0 1282 306 118 42 chr2 221933382 221934396 -31322187 - L2 LINE L2 -84 3229 2157 1021 225 41 16 chr2 221934439 221934683 -31321900 + MLT1E1 LTR MaLR 405 654 0 34 0 0 0 chr2 221936093 221936127 -31320456 + AT_rich Low_complexity Low_complexity 1 34 0 23 68 0 0 chr2 221937311 221937355 -31319228 + AT_rich Low_complexity Low_complexity 1 44 0 1963 187 36 32 chr2 221937498 221938048 -31318535 + MLT2A2 LTR ERVL 1 554 0 1805 208 83 16 chr2 221938119 221938551 -31318032 + LOR1b LTR ERV1 1 461 0 730 186 28 7 chr2 221938579 221938724 -31317859 + FRAM SINE Alu 1 148 -28 464 347 40 50 chr2 221938754 221939299 -31317284 + L2 LINE L2 2364 2903 -411 203 184 0 0 chr2 221989991 221990029 -31266554 + (TTATA)n Simple_repeat Simple_repeat 1 38 0 577 125 0 0 chr2 221990325 221990413 -31266170 + AluJ/FLAM SINE Alu 1 88 -224 312 167 0 0 chr2 221990417 221990531 -31266052 + FLAM_A SINE Alu 64 177 0 306 212 0 0 chr2 221990531 221990597 -31265986 + AluJ/monomer SINE Alu 235 300 0 181 291 47 12 chr2 221991765 221991851 -31264732 - L3 LINE CR1 -809 768 680 222 358 45 49 chr2 221991874 221992117 -31264466 - L2 LINE L2 -4 3268 3027 207 0 0 0 chr2 221992708 221992731 -31263852 + (TA)n Simple_repeat Simple_repeat 2 24 0 359 321 165 18 chr2 221993276 221993616 -31262967 + L2 LINE L2 2286 2675 -639 215 216 39 0 chr2 221993638 221993689 -31262894 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 842 228 8 8 chr2 221993938 221994184 -31262399 - MER33 DNA MER1_type -20 304 59 239 312 65 21 chr2 221994831 221994924 -31261659 + L2 LINE L2 3144 3240 -32 23 0 0 0 chr2 221995020 221995043 -31261540 + AT_rich Low_complexity Low_complexity 1 23 0 534 273 85 0 chr2 221995159 221995324 -31261259 - MIR SINE MIR -82 180 2 257 277 182 47 chr2 221995454 221995602 -31260981 - MIR SINE MIR -18 244 77 405 246 31 31 chr2 221995985 221996115 -31260468 - MER113 DNA MER1_type? -132 389 260 2161 139 27 33 chr2 221996327 221996693 -31259890 + THE1B LTR MaLR 1 364 0 11048 102 11 8 chr2 221996693 221998268 -31258315 + THE1B-int LTR MaLR 1 1580 0 2452 104 28 28 chr2 221998268 221998632 -31257951 + THE1B LTR MaLR 1 364 0 198 0 0 0 chr2 221999324 221999346 -31257237 + (T)n Simple_repeat Simple_repeat 1 22 0 696 279 64 0 chr2 221999874 222000093 -31256490 - L3 LINE CR1 -146 1431 1199 320 248 128 30 chr2 222000256 222000389 -31256194 + MIR SINE MIR 40 185 -77 201 326 70 23 chr2 222002061 222002147 -31254436 - L2 LINE L2 -40 3232 3143 1058 196 114 29 chr2 222002316 222002561 -31254022 - AluJo SINE Alu -4 308 43 27 0 0 0 chr2 222002740 222002767 -31253816 + AT_rich Low_complexity Low_complexity 1 27 0 436 270 119 22 chr2 222002893 222003078 -31253505 + MIR SINE MIR 48 250 -12 2475 74 3 0 chr2 222003600 222003910 -31252673 + AluY SINE Alu 1 311 0 388 339 130 23 chr2 222004316 222004623 -31251960 - L2 LINE L2 0 3313 2974 28 29 0 0 chr2 222005434 222005469 -31251114 + AT_rich Low_complexity Low_complexity 1 35 0 822 180 0 0 chr2 222005972 222006111 -31250472 - FLAM_C SINE Alu -2 141 3 31 0 0 0 chr2 222006235 222006266 -31250317 + AT_rich Low_complexity Low_complexity 1 31 0 259 225 11 22 chr2 222006464 222006553 -31250030 + (TA)n Simple_repeat Simple_repeat 2 89 0 1548 189 42 0 chr2 222006747 222007032 -31249551 - AluJo SINE Alu -7 305 9 34 72 0 0 chr2 222007044 222007113 -31249470 + AT_rich Low_complexity Low_complexity 1 69 0 21 36 0 0 chr2 222009018 222009046 -31247537 + AT_rich Low_complexity Low_complexity 1 28 0 21 71 0 0 chr2 222009286 222009328 -31247255 + AT_rich Low_complexity Low_complexity 1 42 0 292 287 10 69 chr2 222010757 222010858 -31245725 - L2 LINE L2 0 3313 3219 1608 139 93 0 chr2 222011529 222011810 -31244773 - AluSx SINE Alu 0 307 3 188 280 77 56 chr2 222011816 222011959 -31244624 + L2 LINE L2 2131 2276 -1038 225 373 39 20 chr2 222011998 222012100 -31244483 + L2 LINE L2 3189 3292 -21 264 209 29 29 chr2 222012351 222012523 -31244060 + (CATATA)n Simple_repeat Simple_repeat 2 173 0 37 39 0 0 chr2 222013073 222013124 -31243459 + AT_rich Low_complexity Low_complexity 1 51 0 1898 113 3 7 chr2 222013424 222013744 -31242839 + AluSx SINE Alu 1 319 0 21 0 0 0 chr2 222014444 222014465 -31242118 + AT_rich Low_complexity Low_complexity 1 21 0 228 67 0 0 chr2 222014601 222014631 -31241952 + (TTTTC)n Simple_repeat Simple_repeat 2 31 0 4157 83 2 2 chr2 222015715 222016284 -31240299 - L1PA13 LINE L1 0 6163 5595 2088 111 13 10 chr2 222016486 222016792 -31239791 + AluSx SINE Alu 1 307 -5 1452 224 43 41 chr2 222017353 222017515 -31239068 + MLT1C LTR MaLR 1 161 -306 1004 140 91 50 chr2 222017515 222017618 -31238965 - MER30 DNA MER1_type 0 230 133 2301 78 0 0 chr2 222017618 222017911 -31238672 + AluY SINE Alu 2 294 -17 1004 140 91 50 chr2 222017911 222018028 -31238555 - MER30 DNA MER1_type -97 133 1 1452 224 43 41 chr2 222018028 222018308 -31238275 + MLT1C LTR MaLR 161 444 -23 777 275 62 56 chr2 222018517 222018841 -31237742 + MLT1J LTR MaLR 28 353 -158 21 57 0 0 chr2 222019274 222019309 -31237274 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 222019534 222019555 -31237028 + AT_rich Low_complexity Low_complexity 1 21 0 215 100 0 50 chr2 222019713 222019753 -31236830 + (TATAA)n Simple_repeat Simple_repeat 5 42 0 617 304 76 33 chr2 222021423 222021726 -31234857 + L2 LINE L2 2506 2821 -493 299 236 0 0 chr2 222021717 222021772 -31234811 + L2 LINE L2 3014 3068 -245 * 4456 155 38 23 chr2 222021796 222022623 -31233960 + ERVL-B1 LTR ERVL 4918 5756 -8 1924 218 58 26 chr2 222022624 222023051 -31233532 + MLT2B1 LTR ERVL 1 441 -79 222 254 0 32 chr2 222023080 222023143 -31233440 + (TATATG)n Simple_repeat Simple_repeat 4 64 0 793 186 72 5 chr2 222023147 222023192 -31233391 - Ricksha DNA DNA -858 396 339 1199 158 19 0 chr2 222023192 222023401 -31233182 - ERVL LTR ERVL -1 5763 5551 243 111 0 0 chr2 222023406 222023442 -31233141 + MLT2D LTR ERVL 379 414 0 464 277 36 7 chr2 222023455 222023592 -31232991 + L2 LINE L2 2670 2810 -504 * 479 269 112 101 chr2 222023591 222023877 -31232706 + L2 LINE L2 3008 3296 -17 579 205 51 0 chr2 222023989 222024106 -31232477 + FLAM_C SINE Alu 1 123 -20 23 33 0 0 chr2 222024108 222024138 -31232445 + AT_rich Low_complexity Low_complexity 1 30 0 321 298 32 7 chr2 222024149 222024254 -31232329 + MIR SINE MIR 34 146 -62 345 313 118 10 chr2 222024438 222024633 -31231950 - L1M4 LINE L1 -2187 3959 3744 2423 64 0 10 chr2 222024978 222025291 -31231292 - AluY SINE Alu -1 310 1 292 419 31 5 chr2 222026796 222026987 -31229596 - MER91A DNA MER1_type 0 196 1 35 0 0 0 chr2 222027298 222027333 -31229250 + AT_rich Low_complexity Low_complexity 1 35 0 4554 94 8 0 chr2 222027479 222028114 -31228469 - L1PA13 LINE L1 -4 6159 5520 430 141 28 0 chr2 222028672 222028743 -31227840 + MSTC LTR MaLR 1 73 -355 1043 198 19 10 chr2 222028760 222028967 -31227616 + MSTC LTR MaLR 220 428 0 186 189 0 0 chr2 222029594 222029631 -31226952 + (CA)n Simple_repeat Simple_repeat 2 38 0 21 0 0 0 chr2 222030484 222030505 -31226078 + AT_rich Low_complexity Low_complexity 1 21 0 317 93 41 31 chr2 222030657 222030754 -31225829 + (TA)n Simple_repeat Simple_repeat 2 99 0 24 53 0 0 chr2 222030808 222030846 -31225737 + AT_rich Low_complexity Low_complexity 1 38 0 22 70 0 0 chr2 222031008 222031051 -31225532 + AT_rich Low_complexity Low_complexity 1 43 0 396 0 0 0 chr2 222031152 222031196 -31225387 + (TG)n Simple_repeat Simple_repeat 2 45 0 933 271 112 52 chr2 222031851 222032389 -31224194 + L2 LINE L2 2340 2909 -405 453 188 139 0 chr2 222032388 222032489 -31224094 - MER5C DNA MER1_type -206 118 4 * 629 203 227 0 chr2 222032502 222032665 -31223918 + L2 LINE L2 3114 3313 0 180 152 0 0 chr2 222032665 222032698 -31223885 + (TGGA)n Simple_repeat Simple_repeat 2 34 0 276 367 25 0 chr2 222032768 222032888 -31223695 - MIR3 SINE MIR -15 193 71 229 82 41 0 chr2 222032894 222032943 -31223640 + (TA)n Simple_repeat Simple_repeat 1 51 0 2176 119 0 10 chr2 222034043 222034346 -31222237 + AluSg SINE Alu 1 300 -10 216 0 0 0 chr2 222035872 222035896 -31220687 + (A)n Simple_repeat Simple_repeat 1 24 0 1620 155 3 51 chr2 222037131 222037447 -31219136 - AluJb SINE Alu -7 305 5 193 265 20 0 chr2 222037545 222037594 -31218989 + MIR3 SINE MIR 147 196 -12 28 22 0 22 chr2 222038791 222038821 -31217762 + AT_rich Low_complexity Low_complexity 1 31 -14 4359 14 4 0 chr2 222038821 222039323 -31217260 + L1PA3 LINE L1 5652 6155 0 28 22 0 22 chr2 222039323 222039338 -31217245 + AT_rich Low_complexity Low_complexity 31 45 0 353 342 9 18 chr2 222040046 222040157 -31216426 + L2 LINE L2 3151 3260 -12 1653 224 63 18 chr2 222040216 222040662 -31215921 - MLT1C LTR MaLR -1 466 1 26 0 0 0 chr2 222041395 222041421 -31215162 + AT_rich Low_complexity Low_complexity 1 26 0 329 194 29 129 chr2 222041675 222041753 -31214830 - L1ME4a LINE L1 -5 6116 6056 1880 118 0 0 chr2 222041753 222042008 -31214575 + AluSx SINE Alu 1 255 -57 329 194 29 129 chr2 222042008 222042068 -31214515 - L1ME4a LINE L1 -65 6056 5992 581 312 65 28 chr2 222042297 222042544 -31214039 + MIR SINE MIR 5 260 -2 707 322 62 14 chr2 222042592 222042962 -31213621 + L2 LINE L2 2033 2420 -894 382 244 12 12 chr2 222042997 222043083 -31213500 + MLT1H LTR MaLR 135 220 -329 266 240 125 10 chr2 222043181 222043285 -31213298 + MLT1H LTR MaLR 292 533 -2 526 127 0 0 chr2 222043755 222043834 -31212749 - MADE1 DNA Mariner -1 79 1 34 0 0 0 chr2 222045425 222045459 -31211124 + AT_rich Low_complexity Low_complexity 1 34 0 590 283 0 53 chr2 222045558 222045745 -31210838 + MER5A DNA MER1_type 7 183 -6 1866 195 58 8 chr2 222045748 222046231 -31210352 + Charlie4a DNA MER1_type 2 508 0 882 318 140 9 chr2 222046855 222047390 -31209193 + L2 LINE L2 2367 2971 -343 294 120 20 0 chr2 222047890 222047940 -31208643 + L2 LINE L2 3263 3313 0 540 284 104 5 chr2 222048185 222048386 -31208197 - MIR SINE MIR 0 262 42 384 243 78 29 chr2 222049299 222049402 -31207181 + MLT1F LTR MaLR 416 510 -32 1964 241 67 24 chr2 222052081 222052720 -31203863 + L1ME2 LINE L1 5488 6154 -10 1645 179 3 33 chr2 222053941 222054248 -31202335 - AluJo SINE Alu -14 298 1 826 166 170 52 chr2 222054319 222054608 -31201975 + MER33 DNA MER1_type 1 323 -1 23 0 0 0 chr2 222054631 222054654 -31201929 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr2 222054739 222054763 -31201820 + AT_rich Low_complexity Low_complexity 1 24 0 686 219 28 22 chr2 222055373 222055551 -31201032 - MER96B DNA MER1_type? -238 179 1 266 327 19 10 chr2 222055578 222055682 -31200901 + MLT1L LTR MaLR 101 205 -410 246 326 38 23 chr2 222055874 222056006 -31200577 + MLT1J LTR MaLR 378 511 0 261 340 117 0 chr2 222056249 222056352 -31200231 - L2 LINE L2 -9 3263 3149 6482 74 8 5 chr2 222056582 222058226 -31198357 + L1PA8A LINE L1 4490 6131 0 224 345 102 65 chr2 222058623 222059006 -31197577 - L2 LINE L2 -45 3227 2831 383 329 69 36 chr2 222059070 222059490 -31197093 + L1MC/D LINE L1 5384 5817 -1991 1609 173 0 0 chr2 222059501 222059761 -31196822 + L1PA11 LINE L1 4835 5094 -1052 1867 172 27 21 chr2 222059763 222060136 -31196447 + THE1C LTR MaLR 1 375 0 9047 131 59 20 chr2 222060136 222061657 -31194926 + THE1C-int LTR MaLR 1 1580 0 1761 174 55 17 chr2 222061657 222062018 -31194565 + THE1C LTR MaLR 1 375 0 5796 123 12 18 chr2 222062018 222063087 -31193496 + L1PA11 LINE L1 5092 6150 -24 546 300 241 10 chr2 222063250 222063640 -31192943 - L2 LINE L2 0 3313 2834 276 282 97 10 chr2 222065314 222065417 -31191166 + L2 LINE L2 3201 3312 -1 298 305 20 46 chr2 222065961 222066112 -31190471 - MIR3 SINE MIR -32 176 30 331 341 16 16 chr2 222066172 222066301 -31190282 + L2 LINE L2 2713 2841 -473 1557 227 19 27 chr2 222066374 222066749 -31189834 + MLT1A2 LTR MaLR 1 372 -2 409 386 14 71 chr2 222066763 222067058 -31189525 + L2 LINE L2 2970 3247 -25 22 56 0 0 chr2 222067504 222067540 -31189043 + AT_rich Low_complexity Low_complexity 1 36 0 312 328 98 92 chr2 222067830 222068081 -31188502 - L2 LINE L2 -37 3235 2987 249 109 0 0 chr2 222068081 222068127 -31188456 + (TG)n Simple_repeat Simple_repeat 2 47 0 312 328 98 92 chr2 222068127 222068659 -31187924 - L2 LINE L2 -285 2987 2447 601 328 38 17 chr2 222071095 222071330 -31185253 - MIR SINE MIR -22 240 1 772 308 32 0 chr2 222072245 222072492 -31184091 - MIR SINE MIR 0 262 8 367 332 15 6 chr2 222072494 222072667 -31183916 - L1MC/D LINE L1 -362 5759 5602 435 255 97 35 chr2 222072752 222072897 -31183686 - MER63A DNA MER1_type 0 210 57 206 62 31 0 chr2 222072899 222072931 -31183652 + (TTTTG)n Simple_repeat Simple_repeat 1 33 0 22 0 0 0 chr2 222073204 222073226 -31183357 + AT_rich Low_complexity Low_complexity 1 22 0 1931 165 0 3 chr2 222075158 222075467 -31181116 - AluSx SINE Alu -4 308 1 276 259 111 12 chr2 222076304 222076385 -31180198 - L3b LINE CR1 -18 1565 1477 910 60 17 0 chr2 222077450 222077597 -31178986 + L1PA2 LINE L1 6024 6172 0 190 354 122 0 chr2 222078139 222078286 -31178297 + L2 LINE L2 2302 2466 -848 702 123 23 0 chr2 222078330 222078460 -31178123 + CT-rich Low_complexity Low_complexity 2 134 0 257 292 102 112 chr2 222078461 222078928 -31177655 + L2 LINE L2 2555 3068 -204 1247 146 20 65 chr2 222079161 222079407 -31177176 - MER46A DNA MER2_type 0 236 2 2461 61 0 3 chr2 222080401 222080711 -31175872 + AluY SINE Alu 1 309 -2 711 220 73 11 chr2 222081287 222081464 -31175119 - MER5A DNA MER1_type -1 188 1 386 101 107 15 chr2 222081939 222082269 -31174314 + (TA)n Simple_repeat Simple_repeat 1 360 0 203 73 103 0 chr2 222082281 222082349 -31174234 + (TA)n Simple_repeat Simple_repeat 1 75 0 252 0 0 0 chr2 222084438 222084466 -31172117 + (CA)n Simple_repeat Simple_repeat 2 29 0 23 68 0 0 chr2 222084844 222084888 -31171695 + AT_rich Low_complexity Low_complexity 1 44 0 37 16 0 48 chr2 222085581 222085644 -31170939 + AT_rich Low_complexity Low_complexity 1 60 0 2487 151 20 27 chr2 222086185 222086634 -31169949 - Tigger2 DNA MER2_type 0 2718 2273 411 203 0 0 chr2 222086624 222086693 -31169890 - Tigger2 DNA MER2_type -2649 69 1 * 233 211 119 37 chr2 222086995 222087104 -31169479 - MER46C DNA MER2_type -21 317 200 381 73 0 171 chr2 222087109 222087191 -31169392 + LOR1b LTR ERV1 1 68 -393 441 190 8 58 chr2 222087211 222087332 -31169251 + LOR1a LTR ERV1 317 431 -66 615 281 10 15 chr2 222087369 222087568 -31169015 - MER46C DNA MER2_type -138 200 3 381 305 37 30 chr2 222087575 222087739 -31168844 - MIR SINE MIR -70 192 28 2932 172 70 40 chr2 222088344 222088735 -31167848 - L1MB3 LINE L1 0 6183 5762 1773 126 14 41 chr2 222088735 222089029 -31167554 - AluSx SINE Alu -26 286 1 2932 172 70 40 chr2 222089029 222089311 -31167272 - L1MB3 LINE L1 -421 5762 5490 21 0 0 0 chr2 222089539 222089560 -31167023 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 222089919 222089941 -31166642 + AT_rich Low_complexity Low_complexity 1 22 0 336 250 0 0 chr2 222090658 222090734 -31165849 + MIR SINE MIR 152 227 -35 21 0 0 0 chr2 222092314 222092335 -31164248 + AT_rich Low_complexity Low_complexity 1 21 0 328 167 61 15 chr2 222092408 222092474 -31164109 - L2 LINE L2 -1 3312 3244 1726 154 39 3 chr2 222092495 222092781 -31163802 - AluJo SINE Alu -10 302 7 997 304 63 11 chr2 222093157 222093744 -31162839 - L2 LINE L2 -17 3296 2669 1080 169 6 0 chr2 222094562 222094740 -31161843 + AluJb SINE Alu 1 179 -133 494 143 36 36 chr2 222095718 222095830 -31160753 + L1MB7 LINE L1 6073 6184 0 201 250 0 19 chr2 222096327 222096379 -31160204 + (CA)n Simple_repeat Simple_repeat 2 52 0 1519 184 6 32 chr2 222098013 222098329 -31158254 + AluJb SINE Alu 1 308 -4 292 198 188 10 chr2 222098332 222098428 -31158155 - MIR SINE MIR -51 211 99 1047 200 41 41 chr2 222100141 222100386 -31156197 + AluJo SINE Alu 67 311 -1 361 325 68 6 chr2 222100899 222101062 -31155521 + MIR SINE MIR 77 249 -13 188 165 0 0 chr2 222102198 222102241 -31154342 + MIR SINE MIR 71 114 -94 184 339 0 0 chr2 222103191 222103247 -31153336 + L2 LINE L2 3258 3313 0 190 267 40 27 chr2 222103301 222103376 -31153207 + L2 LINE L2 1904 1979 -1335 415 260 32 8 chr2 222103568 222103691 -31152892 - L1ME3A LINE L1 -19 6151 6026 327 49 0 0 chr2 222104555 222104596 -31151987 + (TG)n Simple_repeat Simple_repeat 2 42 0 637 196 211 5 chr2 222104783 222104992 -31151591 - MER33 DNA MER1_type -46 278 27 226 319 111 0 chr2 222105041 222105113 -31151470 + L2 LINE L2 3230 3309 -4 211 264 0 35 chr2 222105229 222105316 -31151267 + A-rich Low_complexity Low_complexity 2 85 0 21 0 0 0 chr2 222109082 222109103 -31147480 + AT_rich Low_complexity Low_complexity 1 21 0 210 283 0 17 chr2 222109332 222109392 -31147191 + (CA)n Simple_repeat Simple_repeat 2 60 0 397 326 71 22 chr2 222109812 222109996 -31146587 - MIR3 SINE MIR -3 205 13 482 286 21 7 chr2 222110249 222110389 -31146194 - MIR SINE MIR -74 188 47 203 250 0 0 chr2 222110702 222110746 -31145837 + GA-rich Low_complexity Low_complexity 4 47 0 515 272 84 31 chr2 222111185 222111446 -31145137 - L3 LINE CR1 -51 1526 1252 211 203 0 43 chr2 222111542 222111611 -31144972 + T-rich Low_complexity Low_complexity 3 68 0 224 230 103 87 chr2 222112948 222113074 -31143509 + MIR SINE MIR 135 262 0 23 0 0 0 chr2 222113147 222113170 -31143413 + AT_rich Low_complexity Low_complexity 1 23 0 451 248 75 8 chr2 222113329 222113462 -31143121 + MIR SINE MIR 121 262 0 621 293 63 11 chr2 222113485 222113676 -31142907 - MIR SINE MIR -40 222 22 406 246 70 7 chr2 222114004 222114146 -31142437 + L1MB7 LINE L1 6031 6181 -3 953 304 89 69 chr2 222114261 222114810 -31141773 - MLT1H1 LTR MaLR -23 532 13 350 309 91 12 chr2 222115812 222115977 -31140606 - MER5B DNA MER1_type 0 178 1 202 374 150 21 chr2 222115977 222116308 -31140275 - L3 LINE CR1 -840 737 364 1432 195 20 3 chr2 222116607 222116904 -31139679 + AluJo SINE Alu 1 302 -10 219 69 0 0 chr2 222117330 222117359 -31139224 + (TA)n Simple_repeat Simple_repeat 1 29 0 1845 132 51 68 chr2 222118328 222118698 -31137885 + THE1B LTR MaLR 1 364 0 21 36 0 0 chr2 222118825 222118853 -31137730 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 222119645 222119666 -31136917 + AT_rich Low_complexity Low_complexity 1 21 0 1616 184 0 48 chr2 222119668 222119977 -31136606 + AluJb SINE Alu 1 294 -18 22 56 0 0 chr2 222120127 222120163 -31136420 + AT_rich Low_complexity Low_complexity 1 36 0 315 309 26 66 chr2 222120472 222120624 -31135959 - MIR SINE MIR 0 262 117 202 395 37 0 chr2 222120629 222120710 -31135873 + L2 LINE L2 3226 3309 -4 530 345 11 11 chr2 222122800 222122991 -31133592 - MIR3 SINE MIR -2 206 16 24 0 0 0 chr2 222123187 222123211 -31133372 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr2 222124938 222124960 -31131623 + AT_rich Low_complexity Low_complexity 1 22 0 193 210 32 0 chr2 222125087 222125149 -31131434 + (CATATA)n Simple_repeat Simple_repeat 5 68 0 315 286 18 18 chr2 222127003 222127115 -31129468 + CT-rich Low_complexity Low_complexity 3 114 0 394 277 30 0 chr2 222127854 222127955 -31128628 - MIR SINE MIR -96 166 63 289 333 11 0 chr2 222128465 222128552 -31128031 + L2 LINE L2 3184 3271 -1 214 308 46 0 chr2 222130441 222130506 -31126077 + L2 LINE L2 3205 3272 0 486 266 7 52 chr2 222130848 222131002 -31125581 + MIR SINE MIR 116 262 0 255 324 0 0 chr2 222133183 222133254 -31123329 - MER96 DNA MER1_type? -103 72 2 268 265 82 54 chr2 222133270 222133417 -31123166 - LTR33 LTR ERVL -338 183 33 354 371 8 8 chr2 222134332 222134456 -31122127 - MIR SINE MIR -138 124 1 2166 140 0 0 chr2 222136142 222136450 -31120133 - AluSx SINE Alu -4 308 1 23 54 0 0 chr2 222136707 222136744 -31119839 + AT_rich Low_complexity Low_complexity 1 37 0 382 316 57 28 chr2 222137579 222137756 -31118827 + MIR3 SINE MIR 2 183 -25 215 255 20 0 chr2 222138334 222138385 -31118198 - L2 LINE L2 -5 3267 3216 183 333 61 53 chr2 222139117 222139231 -31117352 + L2 LINE L2 3187 3301 -12 204 40 0 0 chr2 222139327 222139352 -31117231 + (CA)n Simple_repeat Simple_repeat 1 25 0 221 303 179 19 chr2 222139412 222139574 -31117009 + MIR3 SINE MIR 20 207 -1 1644 177 42 12 chr2 222141266 222141599 -31114984 - MER61A LTR ERV1 0 343 1 384 264 33 60 chr2 222141757 222141939 -31114644 - MLT1K LTR MaLR -32 556 380 2165 113 38 9 chr2 222141941 222142286 -31114297 - L1PA13 LINE L1 0 6163 5809 1836 162 24 18 chr2 222142709 222143037 -31113546 - MER83B LTR ERV1 -2 376 47 1713 156 6 32 chr2 222143106 222143421 -31113162 + AluJb SINE Alu 1 307 -5 191 262 179 0 chr2 222143437 222143521 -31113062 - MIR SINE MIR -65 197 99 304 225 0 28 chr2 222145788 222145859 -31110724 + MIR SINE MIR 148 216 -46 372 353 53 12 chr2 222146417 222146587 -31109996 - MER5B DNA MER1_type 0 178 2 22697 79 1 1 chr2 222146779 222150058 -31106525 + HERVL LTR ERVL 2116 5394 -260 342 45 0 0 chr2 222150311 222150355 -31106228 + (TG)n Simple_repeat Simple_repeat 1 44 0 21 57 0 0 chr2 222150412 222150447 -31106136 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 222150575 222150596 -31105987 + AT_rich Low_complexity Low_complexity 1 21 0 202 189 0 0 chr2 222150617 222150654 -31105929 + (CA)n Simple_repeat Simple_repeat 2 38 0 1524 170 35 7 chr2 222150654 222150936 -31105647 - MER2 DNA MER2_type 0 345 56 303 28 0 0 chr2 222150966 222151002 -31105581 + (TG)n Simple_repeat Simple_repeat 1 36 0 34 24 0 0 chr2 222151125 222151166 -31105417 + AT_rich Low_complexity Low_complexity 1 41 0 511 235 20 0 chr2 222152485 222152587 -31103996 + MER5A DNA MER1_type 9 112 -77 276 198 23 12 chr2 222152611 222152697 -31103886 + (CATATA)n Simple_repeat Simple_repeat 3 89 0 320 282 26 26 chr2 222152697 222152814 -31103769 - L1MC4 LINE L1 -1337 6705 6589 290 308 98 18 chr2 222152990 222153455 -31103128 - L1ME LINE L1 -356 5765 5255 279 0 0 0 chr2 222155400 222155431 -31101152 + (TA)n Simple_repeat Simple_repeat 2 32 0 * 285 51 0 0 chr2 222155430 222155469 -31101114 + (CA)n Simple_repeat Simple_repeat 2 40 0 21 57 0 0 chr2 222156331 222156366 -31100217 + AT_rich Low_complexity Low_complexity 1 35 0 212 342 79 13 chr2 222156689 222156841 -31099742 + L2 LINE L2 2186 2347 -967 1702 124 0 0 chr2 222157992 222158226 -31098357 - AluSx SINE Alu -77 235 2 351 314 93 0 chr2 222160080 222160198 -31096385 - L2 LINE L2 -9 3304 3176 251 346 25 0 chr2 222161850 222161931 -31094652 + L2 LINE L2 3184 3266 -6 386 93 93 6 chr2 222162132 222162294 -31094289 + (TA)n Simple_repeat Simple_repeat 2 177 0 1024 235 87 68 chr2 222164306 222164676 -31091907 + MLT1J1 LTR MaLR 66 442 -4 28 48 0 0 chr2 222164771 222164813 -31091770 + AT_rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr2 222165843 222165867 -31090716 + AT_rich Low_complexity Low_complexity 1 24 0 26 30 0 0 chr2 222165894 222165927 -31090656 + AT_rich Low_complexity Low_complexity 1 33 0 2338 93 3 0 chr2 222166124 222166426 -31090157 - AluSc SINE Alu -6 303 1 725 288 49 13 chr2 222166873 222167099 -31089484 + MIR SINE MIR 29 262 0 1901 142 17 0 chr2 222167702 222168004 -31088579 + AluJb SINE Alu 1 307 -5 267 152 0 0 chr2 222168004 222168050 -31088533 + GA-rich Low_complexity Low_complexity 1 46 0 306 296 35 70 chr2 222168453 222168625 -31087958 + L1ME4a LINE L1 5794 5959 -162 240 163 0 0 chr2 222168625 222168674 -31087909 + LTR66 LTR ERVL 394 442 -168 225 227 102 11 chr2 222168708 222168796 -31087787 + L1ME4a LINE L1 5970 6065 -56 1936 147 3 0 chr2 222169466 222169752 -31086831 - AluSx SINE Alu -25 287 1 225 0 0 0 chr2 222170085 222170110 -31086473 + (TA)n Simple_repeat Simple_repeat 1 25 0 2116 103 3 44 chr2 222170111 222170432 -31086151 + AluSx SINE Alu 5 312 0 305 329 209 6 chr2 222170610 222170950 -31085633 - L2 LINE L2 -449 2865 2457 391 282 94 66 chr2 222171680 222171861 -31084722 + MIR SINE MIR 21 206 -56 22 0 0 0 chr2 222172238 222172260 -31084323 + AT_rich Low_complexity Low_complexity 1 22 0 3437 224 70 5 chr2 222172348 222173209 -31083374 + L1MD2 LINE L1 5439 6355 -4 2885 163 95 0 chr2 222173840 222174397 -31082186 + L1MB1 LINE L1 5558 6167 -1 235 188 21 0 chr2 222174944 222174992 -31081591 - L2 LINE L2 -1 3312 3264 3144 91 0 2 chr2 222175171 222175610 -31080973 - L1PA14 LINE L1 -2 6159 5722 3061 91 31 0 chr2 222175618 222176074 -31080509 + L1PA14 LINE L1 5240 5708 -453 223 345 11 11 chr2 222176085 222176172 -31080411 - L2 LINE L2 -229 3084 2998 225 314 88 36 chr2 222177373 222177567 -31079016 + L2 LINE L2 2850 3053 -219 226 141 51 13 chr2 222177651 222177729 -31078854 + (TA)n Simple_repeat Simple_repeat 2 82 0 996 253 54 4 chr2 222177828 222178069 -31078514 - MIR SINE MIR -5 257 5 261 307 18 0 chr2 222178077 222178191 -31078392 + (TA)n Simple_repeat Simple_repeat 2 117 0 30 27 0 0 chr2 222178537 222178574 -31078009 + AT_rich Low_complexity Low_complexity 1 37 0 2231 59 10 13 chr2 222178603 222178908 -31077675 - L1PA10 LINE L1 -3 6165 5862 612 202 0 136 chr2 222178955 222179019 -31077564 - MER5B DNA MER1_type -4 174 103 1036 180 0 0 chr2 222179019 222179191 -31077392 + FAM SINE Alu 1 172 -3 612 202 0 136 chr2 222179191 222179324 -31077259 - MER5B DNA MER1_type -75 103 4 266 254 0 14 chr2 222179895 222179966 -31076617 + MLT1I LTR MaLR 330 399 -10 31 26 0 0 chr2 222181668 222181706 -31074877 + AT_rich Low_complexity Low_complexity 1 38 0 273 57 0 0 chr2 222182345 222182380 -31074203 + (CTATA)n Simple_repeat Simple_repeat 1 35 0 2211 151 67 15 chr2 222182767 222183171 -31073412 + MSTB LTR MaLR 1 425 -1 2175 91 0 61 chr2 222183478 222183808 -31072775 - AluSg SINE Alu 0 310 1 25 31 0 0 chr2 222184261 222184293 -31072290 + AT_rich Low_complexity Low_complexity 1 32 0 260 291 88 40 chr2 222184434 222184582 -31072001 + MIR SINE MIR 78 232 -30 501 277 161 13 chr2 222186440 222186595 -31069988 - MER45A DNA AcHobo 0 178 1 23 33 0 0 chr2 222187718 222187748 -31068835 + AT_rich Low_complexity Low_complexity 1 30 0 967 208 26 22 chr2 222187898 222188129 -31068454 + MER46A DNA MER2_type 5 236 0 1535 232 60 23 chr2 222188361 222188710 -31067873 + MLT1A2 LTR MaLR 13 374 0 216 0 0 0 chr2 222189034 222189058 -31067525 + (TAAAA)n Simple_repeat Simple_repeat 1 24 0 233 255 0 0 chr2 222190038 222190089 -31066494 + (TA)n Simple_repeat Simple_repeat 1 51 0 210 361 262 0 chr2 222191299 222191421 -31065162 + L2 LINE L2 3116 3269 -3 1701 153 29 0 chr2 222192748 222193023 -31063560 + AluSx SINE Alu 3 285 -27 252 0 0 0 chr2 222193023 222193051 -31063532 + (CA)n Simple_repeat Simple_repeat 2 29 0 256 241 170 45 chr2 222194776 222194888 -31061695 - L2 LINE L2 -6 3266 3141 219 150 0 0 chr2 222195225 222195265 -31061318 + (T)n Simple_repeat Simple_repeat 1 40 0 206 145 87 0 chr2 222195788 222195857 -31060726 + (TA)n Simple_repeat Simple_repeat 2 76 0 278 253 44 0 chr2 222195864 222195955 -31060628 + L1MC4 LINE L1 6614 6708 -1334 236 247 0 12 chr2 222195888 222195969 -31060614 - L1MC4 LINE L1 -1322 6720 6641 * 581 100 0 0 chr2 222196794 222196874 -31059709 - MADE1 DNA Mariner 0 80 1 1025 204 34 13 chr2 222198967 222199239 -31057344 + L1MB1 LINE L1 5921 6197 0 566 302 51 38 chr2 222200067 222200302 -31056281 - MIR SINE MIR -11 251 14 1721 91 4 4 chr2 222200958 222201188 -31055395 - AluSq SINE Alu -8 305 76 297 297 8 8 chr2 222201319 222201437 -31055146 + GA-rich Low_complexity Low_complexity 1 118 0 1305 293 119 58 chr2 222201621 222202574 -31054009 + L2 LINE L2 2254 3263 -50 262 345 157 18 chr2 222206153 222206382 -31050201 - MIR SINE MIR -1 261 1 25 0 0 0 chr2 222206399 222206424 -31050159 + AT_rich Low_complexity Low_complexity 1 25 0 180 349 78 31 chr2 222208729 222208858 -31047725 + MIR SINE MIR 20 154 -108 226 355 7 92 chr2 222208923 222209075 -31047508 + L2 LINE L2 3134 3272 0 345 324 24 6 chr2 222209372 222209542 -31047041 + L1 LINE L1 4763 4935 -1211 205 318 16 0 chr2 222209701 222209764 -31046819 - MIR SINE MIR -68 140 77 3005 82 47 5 chr2 222210644 222211070 -31045513 + MLT2A1 LTR ERVL 1 444 0 20009 79 17 16 chr2 222211070 222213775 -31042808 + HERVL-A1 LTR ERVL 1 2708 -2946 446 312 7 28 chr2 222214029 222214170 -31042413 + MIR3 SINE MIR 44 181 -27 22 0 0 0 chr2 222214354 222214376 -31042207 + AT_rich Low_complexity Low_complexity 1 22 0 362 323 102 21 chr2 222215382 222215568 -31041015 + MIR3 SINE MIR 2 202 -6 23 33 0 0 chr2 222216252 222216282 -31040301 + AT_rich Low_complexity Low_complexity 1 30 0 24 32 0 0 chr2 222217231 222217262 -31039321 + AT_rich Low_complexity Low_complexity 1 31 0 221 320 80 0 chr2 222218844 222218919 -31037664 - L2 LINE L2 -38 3234 3154 576 197 82 20 chr2 222220296 222220443 -31036140 + Tigger2 DNA MER2_type 2 157 -2561 2615 96 0 0 chr2 222220444 222220809 -31035774 - L1P LINE L1 -3916 2230 1866 6274 50 0 0 chr2 222220809 222221586 -31034997 + L1PA7 LINE L1 5372 6148 -6 3832 136 3 7 chr2 222221586 222222181 -31034402 + Tigger2 DNA MER2_type 152 744 -1974 1358 144 68 0 chr2 222222241 222222477 -31034106 + Tigger2 DNA MER2_type 2451 2702 -16 397 264 101 20 chr2 222222487 222222635 -31033948 + MIR SINE MIR 48 207 -55 229 289 74 52 chr2 222222768 222222903 -31033680 + MIR SINE MIR 122 259 -3 32 26 0 0 chr2 222223423 222223462 -31033121 + AT_rich Low_complexity Low_complexity 1 39 0 396 291 95 70 chr2 222223822 222224045 -31032538 - MLT1J2 LTR MaLR -170 239 15 23 0 0 0 chr2 222224085 222224108 -31032475 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 222224191 222224219 -31032364 + AT_rich Low_complexity Low_complexity 1 28 0 182 333 154 35 chr2 222225110 222225311 -31031272 - L2 LINE L2 -1 3312 3088 815 269 96 84 chr2 222225314 222225876 -31030707 - MLT1G LTR MaLR -6 584 16 902 258 18 5 chr2 222227570 222227791 -31028792 + MER58A DNA MER1_type 1 224 0 21 0 0 0 chr2 222227907 222227928 -31028655 + AT_rich Low_complexity Low_complexity 1 21 0 1610 40 0 0 chr2 222228567 222228766 -31027817 + L1PA4 LINE L1 5957 6155 0 31 44 0 0 chr2 222231682 222231727 -31024856 + AT_rich Low_complexity Low_complexity 1 45 0 33 0 0 0 chr2 222232465 222232498 -31024085 + AT_rich Low_complexity Low_complexity 1 33 0 22 70 0 0 chr2 222232694 222232737 -31023846 + AT_rich Low_complexity Low_complexity 1 43 0 1577 216 47 32 chr2 222233013 222233415 -31023168 - MLT1C LTR MaLR 0 467 60 376 305 57 14 chr2 222233779 222233920 -31022663 + MER69 DNA AcHobo 68 214 -2312 313 169 0 17 chr2 222233992 222234051 -31022532 + MER69 DNA AcHobo 495 552 -1974 966 229 44 12 chr2 222234051 222234504 -31022079 + MER69 DNA AcHobo 2011 2510 -16 259 350 140 25 chr2 222235197 222235354 -31021229 - MIR3 SINE MIR -4 204 30 2289 92 0 0 chr2 222235533 222235828 -31020755 - AluSx SINE Alu -11 301 7 2291 113 3 0 chr2 222236266 222236577 -31020006 - AluSx SINE Alu 0 312 1 44 35 0 0 chr2 222237709 222237767 -31018816 + AT_rich Low_complexity Low_complexity 1 58 0 21 36 0 0 chr2 222237836 222237864 -31018719 + AT_rich Low_complexity Low_complexity 1 28 0 22 58 0 43 chr2 222238187 222238256 -31018327 + AT_rich Low_complexity Low_complexity 1 66 0 1612 92 75 0 chr2 222239207 222239446 -31017137 + L1PA16 LINE L1 5901 6157 -9 318 339 139 0 chr2 222239627 222239807 -31016776 + MIR SINE MIR 48 252 -10 1607 159 0 50 chr2 222240233 222240535 -31016048 + AluJo SINE Alu 3 289 -23 876 179 75 92 chr2 222240598 222240838 -31015745 + MER46A DNA MER2_type 1 236 0 21 0 0 0 chr2 222242251 222242272 -31014311 + AT_rich Low_complexity Low_complexity 1 21 0 1867 175 26 12 chr2 222242272 222242614 -31013969 + MER7A DNA MER2_type 1 345 -1 492 270 157 0 chr2 222242725 222242884 -31013699 + MER5A DNA MER1_type 6 189 0 25 0 0 0 chr2 222243040 222243065 -31013518 + AT_rich Low_complexity Low_complexity 1 25 0 257 337 0 43 chr2 222243539 222243631 -31012952 + L2 LINE L2 1438 1525 -1789 1482 261 298 15 chr2 222243640 222244429 -31012154 + L2 LINE L2 1627 2638 -676 424 307 7 22 chr2 222244529 222244666 -31011917 + L2 LINE L2 3179 3313 0 222 240 0 0 chr2 222246646 222246696 -31009887 + (TA)n Simple_repeat Simple_repeat 1 50 0 38 22 0 0 chr2 222247878 222247923 -31008660 + AT_rich Low_complexity Low_complexity 1 45 0 1989 148 0 0 chr2 222248057 222248361 -31008222 - AluSx SINE Alu -8 304 1 214 297 47 0 chr2 222249053 222249117 -31007466 - MIR3 SINE MIR -24 184 118 225 333 44 35 chr2 222249908 222250022 -31006561 - L3b LINE CR1 -25 1558 1444 677 196 169 27 chr2 222251012 222251196 -31005387 + MIR SINE MIR 48 257 -5 22 35 0 0 chr2 222252829 222252858 -31003725 + AT_rich Low_complexity Low_complexity 1 29 0 940 159 0 0 chr2 222254756 222254913 -31001670 - FRAM SINE Alu 0 176 20 678 244 106 21 chr2 222255078 222255341 -31001242 - MER39 LTR ERV1 0 682 417 1978 103 47 23 chr2 222255375 222255675 -31000908 - AluSg SINE Alu 0 310 4 440 264 143 28 chr2 222255682 222255864 -31000719 - MER34 LTR ERV1 -339 203 1 191 309 55 102 chr2 222256598 222256700 -30999883 - MIR SINE MIR -50 212 122 1356 201 41 27 chr2 222256700 222256994 -30999589 + AluJo SINE Alu 1 298 -14 191 309 55 102 chr2 222256994 222257106 -30999477 - MIR SINE MIR -140 122 6 26 30 0 0 chr2 222257408 222257441 -30999142 + AT_rich Low_complexity Low_complexity 1 33 0 9989 110 5 1 chr2 222257502 222258906 -30997677 + L1PA7 LINE L1 1 1410 -5051 16147 101 14 1 chr2 222258907 222262084 -30994499 + L1PA7 LINE L1 3300 6469 0 2117 112 0 0 chr2 222263335 222263620 -30992963 + AluY SINE Alu 1 285 -26 509 239 63 44 chr2 222263867 222264026 -30992557 - MIR SINE MIR -58 204 43 2135 128 7 0 chr2 222265741 222266039 -30990544 - AluSx SINE Alu -11 301 2 278 362 86 30 chr2 222266113 222266662 -30989921 + L2 LINE L2 2359 2974 -298 317 221 15 0 chr2 222266972 222267040 -30989543 - L1MC4a LINE L1 -1218 6590 6522 2014 146 3 0 chr2 222268782 222269077 -30987506 - AluSx SINE Alu -14 298 3 2106 223 65 83 chr2 222269569 222270229 -30986354 - MLT1E1 LTR MaLR 0 654 7 42 71 0 0 chr2 222270344 222270428 -30986155 + AT_rich Low_complexity Low_complexity 1 84 0 23 33 0 0 chr2 222271120 222271150 -30985433 + AT_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr2 222272292 222272318 -30984265 + AT_rich Low_complexity Low_complexity 1 26 0 209 153 0 17 chr2 222272614 222272673 -30983910 + (TA)n Simple_repeat Simple_repeat 2 59 0 24 0 0 0 chr2 222272687 222272711 -30983872 + AT_rich Low_complexity Low_complexity 1 24 0 380 183 0 0 chr2 222272847 222272918 -30983665 + MER53 DNA DNA 1 71 -118 240 150 0 75 chr2 222272863 222272943 -30983640 - MER53 DNA DNA -7 182 109 * 202 329 113 59 chr2 222273174 222273396 -30983187 - L2 LINE L2 -76 3237 3004 * 586 286 115 13 chr2 222273382 222273616 -30982967 - L2 LINE L2 -1221 2093 1836 192 314 0 0 chr2 222274006 222274057 -30982526 - L2 LINE L2 -4 3309 3259 21 0 0 0 chr2 222274115 222274136 -30982447 + AT_rich Low_complexity Low_complexity 1 21 0 247 297 44 11 chr2 222275301 222275392 -30981191 - L2 LINE L2 -247 3025 2932 32 57 0 0 chr2 222276570 222276623 -30979960 + AT_rich Low_complexity Low_complexity 1 53 0 279 320 188 0 chr2 222276816 222276944 -30979639 + MIR3 SINE MIR 57 208 0 249 83 0 0 chr2 222277601 222277637 -30978946 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 313 237 66 0 chr2 222278144 222278220 -30978363 - MIR SINE MIR -14 248 168 211 35 0 0 chr2 222278633 222278662 -30977921 + L2 LINE L2 3284 3312 -1 2143 245 84 32 chr2 222280790 222281549 -30975034 - L1ME3A LINE L1 -2 6168 5370 295 222 0 0 chr2 222281632 222281643 -30974940 + MER3 DNA MER1_type 37 47 -162 993 234 0 0 chr2 222281643 222281844 -30974739 - MER3 DNA MER1_type 0 209 9 6545 116 9 5 chr2 222282678 222283774 -30972809 - L1PA8A LINE L1 -689 5442 4346 4797 78 26 2 chr2 222283770 222284412 -30972171 + L1PA8A LINE L1 5445 6102 -29 * 25 31 0 0 chr2 222284412 222284444 -30972139 + AT_rich Low_complexity Low_complexity 1 32 0 399 334 101 39 chr2 222284799 222285284 -30971299 - L2 LINE L2 -650 2664 2150 21 0 0 0 chr2 222285520 222285541 -30971042 + AT_rich Low_complexity Low_complexity 1 21 0 753 154 74 7 chr2 222286303 222286452 -30970131 - MLT1B LTR MaLR -231 159 1 301 350 173 4 chr2 222287629 222287855 -30968728 - L2 LINE L2 -140 3173 2910 22 80 0 0 chr2 222288077 222288127 -30968456 + AT_rich Low_complexity Low_complexity 1 50 0 22 0 0 0 chr2 222288185 222288207 -30968376 + AT_rich Low_complexity Low_complexity 1 22 0 256 300 55 18 chr2 222288234 222288344 -30968239 - MIR SINE MIR -86 176 63 2390 50 3 7 chr2 222289155 222289456 -30967127 + AluY SINE Alu 1 300 -11 25 75 0 0 chr2 222289524 222289577 -30967006 + AT_rich Low_complexity Low_complexity 1 53 0 339 253 139 51 chr2 222289591 222289749 -30966834 - MIR SINE MIR -58 204 33 250 214 18 0 chr2 222289799 222289855 -30966728 - L2 LINE L2 -31 3241 3185 23 54 0 0 chr2 222290502 222290539 -30966044 + AT_rich Low_complexity Low_complexity 1 37 0 1334 143 5 0 chr2 222290674 222290877 -30965706 + AluSg/x SINE Alu 92 295 -17 302 24 48 0 chr2 222290877 222290919 -30965664 + (TCTG)n Simple_repeat Simple_repeat 1 44 0 1725 103 4 0 chr2 222290925 222291158 -30965425 + AluSp SINE Alu 1 234 -79 183 280 20 0 chr2 222291314 222291364 -30965219 + L2 LINE L2 3221 3271 -1 268 248 76 32 chr2 222293539 222293632 -30962951 - MER5A DNA MER1_type -80 109 4 377 241 69 75 chr2 222294180 222294354 -30962229 - MER5A DNA MER1_type -9 180 8 345 306 28 0 chr2 222294581 222294689 -30961894 + MER94 DNA DNA 4 114 -20 2568 66 23 3 chr2 222295658 222296006 -30960577 - L1PA10 LINE L1 -1 6167 5813 791 208 45 0 chr2 222296694 222296848 -30959735 - AluJb SINE Alu -14 298 138 3068 132 18 53 chr2 222296913 222297459 -30959124 - MER1A DNA MER1_type 0 527 1 21 0 0 0 chr2 222297693 222297714 -30958869 + AT_rich Low_complexity Low_complexity 1 21 0 27 29 0 0 chr2 222297862 222297896 -30958687 + AT_rich Low_complexity Low_complexity 1 34 0 1040 193 0 26 chr2 222298627 222298819 -30957764 + AluJo SINE Alu 1 187 -125 2417 104 52 3 chr2 222298874 222299221 -30957362 + THE1B LTR MaLR 1 364 0 196 301 24 24 chr2 222299701 222299784 -30956799 - L3 LINE CR1 -858 719 637 1070 177 9 19 chr2 222300855 222301070 -30955513 - MER20 DNA MER1_type -4 215 3 354 169 0 0 chr2 222301113 222301178 -30955405 + (TG)n Simple_repeat Simple_repeat 2 66 0 495 298 29 90 chr2 222301412 222301630 -30954953 + MIR SINE MIR 1 200 -62 2325 57 0 17 chr2 222301630 222301928 -30954655 + AluY SINE Alu 1 293 -18 495 298 29 90 chr2 222301928 222301988 -30954595 + MIR SINE MIR 200 262 0 436 211 53 11 chr2 222302021 222302116 -30954467 + MER20 DNA MER1_type 4 102 -117 31 82 0 0 chr2 222303145 222303218 -30953365 + AT_rich Low_complexity Low_complexity 1 73 0 962 168 114 41 chr2 222304201 222304421 -30952162 - MER46A DNA MER2_type 0 236 1 24 0 0 0 chr2 222304731 222304755 -30951828 + AT_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr2 222305232 222305267 -30951316 + AT_rich Low_complexity Low_complexity 1 35 0 549 233 83 44 chr2 222305858 222305938 -30950645 - MER3 DNA MER1_type -18 191 116 315 0 0 0 chr2 222305938 222305973 -30950610 + (CA)n Simple_repeat Simple_repeat 1 35 0 549 233 83 44 chr2 222305973 222306072 -30950511 - MER3 DNA MER1_type -93 116 5 509 279 95 56 chr2 222306098 222306585 -30949998 - MLT1J LTR MaLR -2 509 1 1832 161 2 106 chr2 222307647 222308082 -30948501 + MLT1B LTR MaLR 1 390 0 578 232 22 7 chr2 222308214 222308352 -30948231 - MER3 DNA MER1_type -2 207 68 2570 158 2 0 chr2 222308558 222308989 -30947594 + L1PA15 LINE L1 5734 6165 0 2125 115 0 0 chr2 222309236 222309545 -30947038 + AluSq SINE Alu 1 309 0 439 205 60 6 chr2 222309961 222310127 -30946456 + (TA)n Simple_repeat Simple_repeat 2 176 0 252 296 56 19 chr2 222310465 222310573 -30946010 + MLT1J LTR MaLR 140 251 -260 258 270 54 0 chr2 222310620 222310694 -30945889 + MLT1I LTR MaLR 277 354 -55 180 275 43 43 chr2 222311565 222311634 -30944949 - L2 LINE L2 -43 3229 3161 401 183 21 0 chr2 222312401 222312494 -30944089 + (TATG)n Simple_repeat Simple_repeat 2 96 0 26 0 0 0 chr2 222314086 222314112 -30942471 + AT_rich Low_complexity Low_complexity 1 26 0 204 97 0 0 chr2 222315917 222315948 -30940635 + (TA)n Simple_repeat Simple_repeat 1 31 0 229 321 18 0 chr2 222316913 222316969 -30939614 + L2 LINE L2 3210 3266 -6 295 403 27 7 chr2 222318008 222318157 -30938426 + MIR SINE MIR 1 152 -110 25 75 0 0 chr2 222319069 222319122 -30937461 + AT_rich Low_complexity Low_complexity 1 53 0 24 32 0 0 chr2 222319488 222319519 -30937064 + AT_rich Low_complexity Low_complexity 1 31 0 372 59 0 0 chr2 222321260 222321311 -30935272 + (TG)n Simple_repeat Simple_repeat 2 52 0 41 72 0 0 chr2 222321354 222321437 -30935146 + AT_rich Low_complexity Low_complexity 1 83 0 28 29 0 0 chr2 222323193 222323228 -30933355 + AT_rich Low_complexity Low_complexity 1 35 0 1636 179 38 64 chr2 222323280 222323671 -30932912 + MLT1B LTR MaLR 4 384 -6 5821 154 13 0 chr2 222323691 222324958 -30931625 + L1PB1 LINE L1 4872 6151 0 313 330 21 0 chr2 222324991 222325085 -30931498 + MIR3 SINE MIR 67 162 -46 585 303 81 25 chr2 222325477 222325800 -30930783 + MER102b DNA MER1_type 1 341 0 760 195 19 6 chr2 222326113 222326272 -30930311 - FRAM SINE Alu -16 160 1 1739 151 80 17 chr2 222326455 222326806 -30929777 + THE1C LTR MaLR 1 373 -2 411 322 28 0 chr2 222328027 222328170 -30928413 - MIR SINE MIR -3 259 113 21 0 0 0 chr2 222328387 222328408 -30928175 + AT_rich Low_complexity Low_complexity 1 21 0 2241 93 0 10 chr2 222328883 222329195 -30927388 + AluSc SINE Alu 1 309 0 407 260 54 54 chr2 222329535 222329739 -30926844 - MIR SINE MIR -11 251 48 263 250 0 22 chr2 222330123 222330215 -30926368 - L1MC4 LINE L1 -1339 6703 6614 225 219 98 0 chr2 222330223 222330305 -30926278 - L1MC4 LINE L1 -1339 6703 6614 361 236 22 11 chr2 222330325 222330414 -30926169 - L1MC4 LINE L1 -1339 6703 6614 385 239 0 22 chr2 222330430 222330522 -30926061 - L1MC4 LINE L1 -1339 6703 6614 7215 140 45 47 chr2 222332052 222333352 -30923231 + HSMAR2 DNA Mariner 4 1301 -1 248 184 39 0 chr2 222333683 222333786 -30922797 + (TA)n Simple_repeat Simple_repeat 1 107 0 4572 143 40 29 chr2 222333787 222334594 -30921989 - Tigger3(Golem) DNA MER2_type -4 3025 2210 599 235 17 0 chr2 222334590 222334705 -30921878 - Tigger3(Golem) DNA MER2_type -2899 130 14 * 1091 88 19 0 chr2 222335062 222335222 -30921361 + HERVL-A1 LTR ERVL 5492 5654 0 2969 78 62 7 chr2 222335222 222335602 -30920981 + MLT2A1 LTR ERVL 1 408 -36 501 17 0 0 chr2 222335602 222335660 -30920923 + (TA)n Simple_repeat Simple_repeat 2 59 0 2969 78 62 7 chr2 222335660 222335700 -30920883 + MLT2A1 LTR ERVL 408 444 0 2358 85 7 3 chr2 222336011 222336318 -30920265 - AluY SINE Alu -3 308 1 297 0 0 0 chr2 222336796 222336829 -30919754 + (TG)n Simple_repeat Simple_repeat 2 34 0 29 0 0 0 chr2 222338831 222338860 -30917723 + AT_rich Low_complexity Low_complexity 1 29 0 1783 223 75 21 chr2 222339239 222339718 -30916865 + MLT1D LTR MaLR 1 505 0 968 181 0 28 chr2 222339865 222340042 -30916541 + AluJo SINE Alu 1 172 -140 21 36 0 0 chr2 222341636 222341664 -30914919 + AT_rich Low_complexity Low_complexity 1 28 0 23 86 0 0 chr2 222341819 222341877 -30914706 + AT_rich Low_complexity Low_complexity 1 58 0 392 320 70 20 chr2 222342036 222342236 -30914347 + MIR SINE MIR 52 261 -1 2261 112 0 0 chr2 222342965 222343259 -30913324 - AluSg SINE Alu -16 294 1 228 281 62 0 chr2 222343791 222343855 -30912728 + MIR3 SINE MIR 93 160 -48 682 136 68 45 chr2 222344426 222344558 -30912025 + MER3 DNA MER1_type 10 144 -65 396 265 39 0 chr2 222344867 222344969 -30911614 - L2 LINE L2 0 3313 3208 26 30 0 0 chr2 222345754 222345787 -30910796 + AT_rich Low_complexity Low_complexity 1 33 0 37 39 0 0 chr2 222346947 222346998 -30909585 + AT_rich Low_complexity Low_complexity 1 51 0 289 272 62 12 chr2 222347108 222347189 -30909394 - L2 LINE L2 -4 3309 3225 199 267 160 0 chr2 222347906 222347981 -30908602 + L2 LINE L2 3186 3272 0 2617 156 40 31 chr2 222348355 222348932 -30907651 + L1MA5 LINE L1 4383 4964 -1182 2109 122 60 28 chr2 222348933 222349286 -30907297 + THE1B LTR MaLR 1 364 0 9214 113 96 5 chr2 222349286 222350734 -30905849 + THE1B-int LTR MaLR 1 1580 0 2112 123 48 34 chr2 222350735 222351093 -30905490 + THE1B LTR MaLR 2 364 0 5912 159 19 5 chr2 222351094 222352412 -30904171 + L1MA5 LINE L1 4962 6298 -2 315 0 0 0 chr2 222353911 222353946 -30902637 + (CA)n Simple_repeat Simple_repeat 1 35 0 276 229 71 0 chr2 222354184 222354254 -30902329 + MIR3 SINE MIR 110 184 -24 1097 233 4 37 chr2 222355228 222355370 -30901213 - MER8 DNA MER2_type -2 237 92 2155 127 28 19 chr2 222355370 222355731 -30900852 + THE1B LTR MaLR 1 364 0 11267 102 6 9 chr2 222355731 222357317 -30899266 + THE1B-int LTR MaLR 1 1580 0 2018 141 54 25 chr2 222357317 222357671 -30898912 + THE1B LTR MaLR 1 364 0 1097 233 4 37 chr2 222357671 222357771 -30898812 - MER8 DNA MER2_type -144 95 1 340 336 24 43 chr2 222359475 222359683 -30896900 + MLT1K LTR MaLR 233 436 -152 413 295 60 12 chr2 222361303 222361469 -30895114 - MIR SINE MIR -83 179 6 362 219 95 9 chr2 222361628 222361733 -30894850 - MER5C DNA MER1_type 0 324 211 311 214 265 0 chr2 222361760 222361858 -30894725 - MER5C DNA MER1_type -200 124 1 439 234 62 23 chr2 222363844 222363972 -30892611 - FLAM_A SINE Alu 0 133 1 415 188 0 12 chr2 222363975 222364055 -30892528 - AluJ/FLAM SINE Alu -225 87 9 520 263 29 34 chr2 222364199 222364374 -30892209 + MER45A DNA AcHobo 5 178 0 31 26 0 0 chr2 222364792 222364830 -30891753 + AT_rich Low_complexity Low_complexity 1 38 0 321 324 145 17 chr2 222364841 222365020 -30891563 + L2 LINE L2 2521 2722 -592 418 295 46 105 chr2 222365047 222365172 -30891411 + L2 LINE L2 3005 3136 -177 225 0 0 0 chr2 222365172 222365197 -30891386 + (CA)n Simple_repeat Simple_repeat 1 25 0 418 295 46 105 chr2 222365197 222365396 -30891187 + L2 LINE L2 3136 3310 -3 553 268 10 0 chr2 222365998 222366146 -30890437 + MIR SINE MIR 102 249 -13 195 129 0 0 chr2 222368317 222368348 -30888235 + (TC)n Simple_repeat Simple_repeat 1 31 0 271 269 77 10 chr2 222368505 222368609 -30887974 - MIR SINE MIR -16 246 136 23 54 0 0 chr2 222369176 222369213 -30887370 + AT_rich Low_complexity Low_complexity 1 37 0 293 299 150 31 chr2 222369329 222369456 -30887127 - L2 LINE L2 -397 2917 2776 294 222 66 12 chr2 222370088 222370255 -30886328 + (TA)n Simple_repeat Simple_repeat 2 177 0 243 230 149 23 chr2 222371453 222371540 -30885043 - MIR SINE MIR -66 196 99 1917 137 3 26 chr2 222371628 222371935 -30884648 - AluSc SINE Alu -5 304 5 2256 83 0 0 chr2 222372765 222373054 -30883529 - AluY SINE Alu -22 289 1 21 0 0 0 chr2 222374616 222374637 -30881946 + AT_rich Low_complexity Low_complexity 1 21 0 1717 169 30 38 chr2 222374666 222375034 -30881549 - MLT1A1 LTR MaLR 0 365 1 250 319 37 7 chr2 222376593 222376728 -30879855 - L2 LINE L2 -8 3305 3167 260 233 50 0 chr2 222376816 222376876 -30879707 - MIR SINE MIR -78 184 122 355 323 50 80 chr2 222376995 222377332 -30879251 + L2 LINE L2 1756 2082 -1232 266 0 29 0 chr2 222377337 222377371 -30879212 + (TC)n Simple_repeat Simple_repeat 1 35 0 205 373 49 21 chr2 222377389 222377531 -30879052 + L2 LINE L2 2618 2763 -551 357 311 8 8 chr2 222377577 222377699 -30878884 - LTR67 LTR ERVL -5 552 431 24 32 0 0 chr2 222378728 222378759 -30877824 + AT_rich Low_complexity Low_complexity 1 31 0 250 284 0 30 chr2 222379260 222379327 -30877256 + L2 LINE L2 3183 3247 -25 25 0 0 0 chr2 222381409 222381434 -30875149 + AT_rich Low_complexity Low_complexity 1 25 0 26 64 0 0 chr2 222382302 222382349 -30874234 + AT_rich Low_complexity Low_complexity 1 47 0 21 36 0 0 chr2 222383019 222383047 -30873536 + AT_rich Low_complexity Low_complexity 1 28 0 2231 100 10 3 chr2 222385916 222386216 -30870367 + AluSq SINE Alu 1 302 -11 23 68 0 0 chr2 222386219 222386263 -30870320 + AT_rich Low_complexity Low_complexity 1 44 0 296 207 17 0 chr2 222386299 222386357 -30870226 - AluSp/q SINE Alu -12 291 233 231 292 70 41 chr2 222386802 222386973 -30869610 + Charlie8 DNA MER1_type 1 176 -2241 276 130 0 0 chr2 222387115 222387161 -30869422 + (TG)n Simple_repeat Simple_repeat 1 46 0 27 29 0 0 chr2 222387664 222387698 -30868885 + AT_rich Low_complexity Low_complexity 1 34 0 202 344 65 21 chr2 222387879 222387972 -30868611 - MER5B DNA MER1_type -7 171 75 28 29 0 0 chr2 222388300 222388335 -30868248 + AT_rich Low_complexity Low_complexity 1 35 0 30 0 0 0 chr2 222390968 222390998 -30865585 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 222391268 222391289 -30865294 + AT_rich Low_complexity Low_complexity 1 21 0 466 357 35 18 chr2 222391327 222391554 -30865029 - MIR SINE MIR 0 262 32 469 250 120 71 chr2 222391599 222391783 -30864800 + MLT1J1 LTR MaLR 1 193 -253 1606 164 33 0 chr2 222391784 222392058 -30864525 - AluJb SINE Alu -6 306 24 326 228 16 106 chr2 222392153 222392276 -30864307 + MLT1J2 LTR MaLR 339 450 0 26 30 0 0 chr2 222393295 222393328 -30863255 + AT_rich Low_complexity Low_complexity 1 33 0 320 259 85 18 chr2 222393425 222393655 -30862928 + L1MEc LINE L1 2310 2495 -4045 2136 119 0 19 chr2 222394097 222394415 -30862168 - AluSx SINE Alu 0 312 1 837 243 46 19 chr2 222394528 222394924 -30861659 + LTR40c LTR ERVL 3 465 0 13611 128 34 32 chr2 222394927 222397337 -30859246 + Tigger1 DNA MER2_type 2 2417 -1 24 32 0 0 chr2 222398499 222398530 -30858053 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr2 222398579 222398600 -30857983 + AT_rich Low_complexity Low_complexity 1 21 0 234 62 0 0 chr2 222399157 222399189 -30857394 + (TA)n Simple_repeat Simple_repeat 1 32 0 252 0 0 0 chr2 222399224 222399252 -30857331 + (TA)n Simple_repeat Simple_repeat 1 28 0 399 286 120 0 chr2 222401014 222401147 -30855436 - MLT1L LTR MaLR -348 267 119 210 118 0 0 chr2 222401343 222401377 -30855206 + (TA)n Simple_repeat Simple_repeat 1 34 0 202 288 75 12 chr2 222401421 222401501 -30855082 + MIR SINE MIR 173 257 -5 210 385 70 56 chr2 222401990 222402203 -30854380 + L2 LINE L2 2943 3158 -114 416 332 33 92 chr2 222402384 222402549 -30854034 - MIR SINE MIR 0 262 117 2222 60 3 3 chr2 222402549 222402856 -30853727 + AluY SINE Alu 1 307 0 416 332 33 92 chr2 222402856 222402960 -30853623 - MIR SINE MIR -145 117 8 2273 89 0 0 chr2 222403543 222403824 -30852759 + AluSc SINE Alu 1 281 -28 22 35 0 0 chr2 222404709 222404738 -30851845 + AT_rich Low_complexity Low_complexity 1 29 0 341 283 98 99 chr2 222404756 222405340 -30851243 + L1ME4a LINE L1 5537 6119 -2 347 300 115 8 chr2 222405443 222405573 -30851010 + MIR3 SINE MIR 39 182 -26 724 82 0 0 chr2 222408515 222408613 -30847970 + L1PA7 LINE L1 5950 6047 -107 * 2156 190 57 10 chr2 222408591 222409086 -30847497 + L1MA5 LINE L1 5783 6300 0 621 263 58 18 chr2 222410620 222410791 -30845792 - MIR SINE MIR -4 258 81 469 318 108 0 chr2 222411163 222411358 -30845225 + MIR SINE MIR 46 261 -1 272 347 13 20 chr2 222411423 222411573 -30845010 - L2 LINE L2 -923 2391 2243 331 320 109 6 chr2 222411747 222411922 -30844661 + MIR SINE MIR 37 229 -33 813 309 18 18 chr2 222412877 222413152 -30843431 - L3 LINE CR1 -136 1441 1167 24 77 0 0 chr2 222413250 222413302 -30843281 + AT_rich Low_complexity Low_complexity 1 52 0 291 116 0 0 chr2 222416347 222416390 -30840193 + MADE1 DNA Mariner 1 43 -37 485 251 39 50 chr2 222416550 222416709 -30839874 + MER69A DNA AcHobo 1 160 -2366 234 0 0 0 chr2 222416709 222416735 -30839848 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 2335 46 3 0 chr2 222416735 222417020 -30839563 - L1PA3 LINE L1 -13 6142 5857 485 251 39 50 chr2 222417020 222417038 -30839545 + MER69A DNA AcHobo 158 177 0 236 214 51 61 chr2 222421743 222421841 -30834742 - MER91C DNA MER1_type -26 114 18 210 231 0 0 chr2 222425201 222425253 -30831330 + (CA)n Simple_repeat Simple_repeat 2 53 0 207 0 0 0 chr2 222426151 222426174 -30830409 + (CGG)n Simple_repeat Simple_repeat 2 24 0 26 64 0 0 chr2 222427633 222427680 -30828903 + GC_rich Low_complexity Low_complexity 1 47 0 194 190 0 17 chr2 222429692 222429750 -30826833 + T-rich Low_complexity Low_complexity 3 59 0 1570 169 41 69 chr2 222429972 222430292 -30826291 + AluJo SINE Alu 1 311 -1 25 0 0 0 chr2 222432137 222432162 -30824421 + AT_rich Low_complexity Low_complexity 1 25 0 232 277 196 0 chr2 222432195 222432307 -30824276 + MIR3 SINE MIR 74 207 -1 1420 205 24 68 chr2 222432448 222432818 -30823765 - MLT1A1 LTR MaLR -11 354 1 2733 93 5 5 chr2 222434592 222434967 -30821616 - THE1C LTR MaLR 0 375 1 33 0 0 0 chr2 222436048 222436081 -30820502 + AT_rich Low_complexity Low_complexity 1 33 0 180 200 0 0 chr2 222437940 222437990 -30818593 + (TA)n Simple_repeat Simple_repeat 2 51 0 231 239 0 0 chr2 222439501 222439589 -30816994 + (TA)n Simple_repeat Simple_repeat 2 89 0 1030 146 41 1 chr2 222439913 222440187 -30816396 - L1P5 LINE L1 -701 5455 5174 2082 162 26 11 chr2 222441377 222441728 -30814855 + MLT1A1 LTR MaLR 6 361 -4 26 0 0 0 chr2 222442026 222442052 -30814531 + AT_rich Low_complexity Low_complexity 1 26 0 2139 113 0 13 chr2 222442150 222442461 -30814122 - AluSx SINE Alu -5 307 1 254 250 0 56 chr2 222442548 222442656 -30813927 + (TA)n Simple_repeat Simple_repeat 2 103 0 5900 127 176 2 chr2 222442774 222443820 -30812763 - Tigger1 DNA MER2_type -1189 1229 2 21 0 0 0 chr2 222444834 222444855 -30811728 + AT_rich Low_complexity Low_complexity 1 21 0 234 260 55 27 chr2 222445298 222445371 -30811212 + MIR3 SINE MIR 127 201 -7 2998 160 20 26 chr2 222446055 222446661 -30809922 - L1MA7 LINE L1 0 6291 5690 408 329 25 89 chr2 222446936 222447331 -30809252 + L1M4 LINE L1 3923 4292 -1854 3652 152 0 13 chr2 222447438 222448058 -30808525 + L1PB4 LINE L1 5544 6155 -1 24 0 0 0 chr2 222449251 222449275 -30807308 + AT_rich Low_complexity Low_complexity 1 24 0 2469 48 20 0 chr2 222451311 222451603 -30804980 + AluY SINE Alu 1 298 -13 583 265 106 6 chr2 222451614 222451784 -30804799 + MIR SINE MIR 36 222 -40 180 326 81 0 chr2 222451854 222451940 -30804643 - L2 LINE L2 -92 3221 3129 219 284 45 15 chr2 222452668 222452735 -30803848 - L2 LINE L2 0 3272 3204 2178 102 0 23 chr2 222453025 222453328 -30803255 - AluSc SINE Alu -11 298 3 1327 168 23 4 chr2 222453499 222453761 -30802822 + L1MB1 LINE L1 5908 6174 -15 231 270 0 27 chr2 222453807 222453881 -30802702 - L2 LINE L2 -1328 1986 1915 1209 222 109 30 chr2 222453959 222454399 -30802184 + MLT1E2 LTR MaLR 93 626 0 262 221 39 0 chr2 222455049 222455126 -30801457 + (TA)n Simple_repeat Simple_repeat 1 80 0 189 351 81 45 chr2 222455203 222455314 -30801269 - L2 LINE L2 -8 3305 3191 21 71 0 0 chr2 222456028 222456070 -30800513 + AT_rich Low_complexity Low_complexity 1 42 0 1051 0 0 0 chr2 222456110 222456228 -30800355 + AluYa5/8 SINE Alu 194 311 0 24 53 0 0 chr2 222456422 222456460 -30800123 + AT_rich Low_complexity Low_complexity 1 38 0 2125 106 0 3 chr2 222458640 222458966 -30797617 + AluSq SINE Alu 3 327 0 393 57 0 0 chr2 222459258 222459311 -30797272 + MADE1 DNA Mariner 28 80 0 211 291 0 18 chr2 222460222 222460277 -30796306 + L2 LINE L2 3210 3263 -9 1899 135 19 50 chr2 222462587 222462906 -30793677 - AluSx SINE Alu -3 309 1 392 319 68 47 chr2 222463163 222463398 -30793185 + L2 LINE L2 3074 3313 0 24 0 0 0 chr2 222463905 222463929 -30792654 + AT_rich Low_complexity Low_complexity 1 24 0 425 333 45 22 chr2 222464344 222464566 -30792017 + L3 LINE CR1 1286 1512 -65 433 304 30 50 chr2 222464595 222464796 -30791787 - MLT1K LTR MaLR -123 465 269 378 252 54 9 chr2 222464897 222465008 -30791575 - MLT1K LTR MaLR -463 125 10 196 250 0 0 chr2 222465056 222465096 -30791487 + L3 LINE CR1 1533 1572 -5 418 329 259 0 chr2 222465771 222465941 -30790642 + MIR SINE MIR 3 216 -46 320 58 0 39 chr2 222466136 222466188 -30790395 + (TTATA)n Simple_repeat Simple_repeat 3 52 0 1949 153 0 10 chr2 222467103 222467417 -30789166 + AluJb SINE Alu 1 311 -1 22 35 0 0 chr2 222467503 222467532 -30789051 + AT_rich Low_complexity Low_complexity 1 29 0 5193 150 36 0 chr2 222468321 222469179 -30787404 - Tigger1 DNA MER2_type -3 2415 1527 21 0 0 0 chr2 222469179 222469200 -30787383 + AT_rich Low_complexity Low_complexity 1 21 0 5715 156 29 12 chr2 222469200 222470253 -30786330 - L1MA4 LINE L1 -1 6299 5210 2331 78 3 0 chr2 222470253 222470547 -30786036 - AluSg SINE Alu 0 310 16 5715 156 29 12 chr2 222470547 222471265 -30785318 - L1MA4 LINE L1 -1090 5210 4506 1594 145 21 150 chr2 222471265 222471889 -30784694 + L1M1 LINE L1 3242 3781 -3784 943 124 0 0 chr2 222471891 222472028 -30784555 - Tigger1 DNA MER2_type -880 1538 1402 21 0 0 0 chr2 222472218 222472239 -30784344 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 222472366 222472390 -30784193 + AT_rich Low_complexity Low_complexity 1 24 0 17715 60 6 3 chr2 222472594 222474942 -30781641 - L1P LINE L1 -2713 3433 1081 771 33 0 0 chr2 222474920 222475012 -30781571 - L1P LINE L1 -6044 102 11 * 867 250 5 5 chr2 222475016 222475224 -30781359 + AluJo SINE Alu 13 220 -92 7587 50 21 0 chr2 222475250 222476209 -30780374 + L1P LINE L1 3489 4467 -1679 306 299 0 10 chr2 222476706 222476803 -30779780 + LTR67 LTR ERVL 428 523 -34 412 280 129 52 chr2 222476841 222477169 -30779414 - L1ME LINE L1 -397 5724 5372 320 267 11 11 chr2 222477717 222477807 -30778776 + MIR SINE MIR 73 162 -100 800 284 25 13 chr2 222477832 222478068 -30778515 + MIR SINE MIR 2 240 -22 254 232 0 0 chr2 222478088 222478144 -30778439 + MIR SINE MIR 194 249 -13 219 139 0 0 chr2 222478323 222478359 -30778224 + (GGAA)n Simple_repeat Simple_repeat 2 37 0 282 341 73 34 chr2 222479750 222479955 -30776628 - L2 LINE L2 -549 2765 2553 1837 129 4 4 chr2 222480091 222480363 -30776220 + AluSx SINE Alu 33 304 -8 323 278 62 56 chr2 222480363 222480507 -30776076 + MIR SINE MIR 32 176 -86 915 80 0 0 chr2 222480735 222480860 -30775723 + (TA)n Simple_repeat Simple_repeat 2 126 0 1912 136 37 0 chr2 222481429 222481723 -30774860 - AluSx SINE Alu -5 307 3 654 216 0 0 chr2 222482629 222482754 -30773829 - FLAM_C SINE Alu -8 125 1 229 343 68 55 chr2 222483468 222483687 -30772896 + MIR SINE MIR 28 249 -13 22 0 0 0 chr2 222483689 222483711 -30772872 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 222483889 222483911 -30772672 + AT_rich Low_complexity Low_complexity 1 22 0 36 53 0 0 chr2 222484053 222484110 -30772473 + AT_rich Low_complexity Low_complexity 1 57 0 22 0 0 0 chr2 222484907 222484929 -30771654 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr2 222485262 222485284 -30771299 + (T)n Simple_repeat Simple_repeat 1 22 0 238 156 47 31 chr2 222485471 222485535 -30771048 + LTR67 LTR ERVL 475 539 -18 185 385 19 19 chr2 222486065 222486169 -30770414 + MIR SINE MIR 41 144 -64 280 176 92 42 chr2 222486804 222486923 -30769660 - L1ME4a LINE L1 -30 6091 5967 200 196 0 71 chr2 222486925 222486955 -30769628 + CT-rich Low_complexity Low_complexity 2 28 -25 2321 110 0 0 chr2 222486955 222487264 -30769319 - AluSx SINE Alu -3 309 1 200 196 0 71 chr2 222487264 222487289 -30769294 + CT-rich Low_complexity Low_complexity 28 53 0 29 0 0 0 chr2 222488199 222488228 -30768355 + AT_rich Low_complexity Low_complexity 1 29 0 183 337 157 0 chr2 222488254 222488337 -30768246 - L2 LINE L2 -16 3297 3202 22 0 0 0 chr2 222489336 222489358 -30767225 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr2 222489733 222489770 -30766813 + AT_rich Low_complexity Low_complexity 1 37 0 535 319 0 0 chr2 222491178 222491313 -30765270 - MIR3 SINE MIR -17 191 57 2267 100 0 25 chr2 222492482 222492801 -30763782 + AluSx SINE Alu 1 311 -1 312 208 62 31 chr2 222492847 222492943 -30763640 + L1ME4a LINE L1 5991 6089 -32 1204 260 118 15 chr2 222493874 222494281 -30762302 + L1M2 LINE L1 10 458 -6391 372 291 142 75 chr2 222494306 222494766 -30761817 + L1M2 LINE L1 613 1048 -5801 320 265 104 97 chr2 222494768 222495036 -30761547 + L1M2 LINE L1 725 994 -5855 1425 186 4 0 chr2 222495080 222495338 -30761245 + L1PB4 LINE L1 5897 6155 -1 943 221 156 64 chr2 222495410 222495692 -30760891 + L1ME1 LINE L1 5879 6150 -16 705 296 110 4 chr2 222495771 222496035 -30760548 - MLT1I LTR MaLR -2 407 116 1949 295 63 25 chr2 222496411 222497353 -30759230 + L2 LINE L2 2322 3313 0 40 73 0 0 chr2 222497950 222498032 -30758551 + AT_rich Low_complexity Low_complexity 1 82 0 2219 93 3 0 chr2 222498107 222498397 -30758186 + AluSp SINE Alu 1 291 -22 715 308 37 21 chr2 222498688 222499156 -30757427 - LTR33 LTR ERVL 0 521 1 2689 179 46 18 chr2 222500525 222501072 -30755511 + MER68 LTR ERV1 1 562 0 1678 286 153 6 chr2 222501294 222501965 -30754618 + LTR50 LTR ERVL 20 789 -6 1925 176 26 17 chr2 222502133 222502485 -30754098 - MLT1C LTR MaLR -90 377 23 492 262 180 41 chr2 222502513 222502780 -30753803 + MLT1J1 LTR MaLR 139 442 -4 3527 180 64 65 chr2 222502894 222503798 -30752785 + L1MA9 LINE L1 5402 6304 -8 40 21 0 0 chr2 222503980 222504027 -30752556 + AT_rich Low_complexity Low_complexity 1 47 0 1386 183 76 0 chr2 222504181 222504444 -30752139 + AluJb SINE Alu 1 283 -29 231 215 15 31 chr2 222504444 222504504 -30752079 + (CAGT)n Simple_repeat Simple_repeat 4 62 0 247 302 12 23 chr2 222505577 222505663 -30750920 + MIR SINE MIR 71 155 -107 1136 168 10 5 chr2 222505712 222505908 -30750675 - AluY SINE Alu -20 291 95 518 164 0 10 chr2 222505978 222506082 -30750501 + CT-rich Low_complexity Low_complexity 1 103 0 234 213 27 0 chr2 222506208 222506283 -30750300 + CT-rich Low_complexity Low_complexity 1 77 0 2110 138 0 0 chr2 222506314 222506610 -30749973 - AluSx SINE Alu -16 296 1 23 54 0 0 chr2 222507736 222507773 -30748810 + AT_rich Low_complexity Low_complexity 1 37 0 330 364 18 0 chr2 222508724 222508834 -30747749 - MIR SINE MIR -64 144 33 2835 251 72 23 chr2 222510087 222512711 -30743872 + L1MA9 LINE L1 1 2495 -3715 * 6732 202 55 28 chr2 222512693 222514532 -30742051 + L1MA9 LINE L1 2951 4839 -1371 1255 174 0 68 chr2 222514532 222514797 -30741786 + AluJo SINE Alu 47 293 -19 2203 95 0 3 chr2 222514830 222515125 -30741458 + AluY SINE Alu 1 294 -17 5050 155 42 35 chr2 222515145 222516504 -30740079 + L1MA9 LINE L1 4847 6233 -143 255 31 0 0 chr2 222516504 222516536 -30740047 + (CA)n Simple_repeat Simple_repeat 1 32 0 5050 155 42 35 chr2 222516536 222516679 -30739904 + L1MA9 LINE L1 6233 6374 -2 524 313 91 14 chr2 222516733 222517116 -30739467 - L2 LINE L2 -183 3130 2720 1312 309 135 19 chr2 222517141 222517911 -30738672 - L2 LINE L2 -1529 1785 927 1172 211 69 16 chr2 222518032 222518335 -30738248 - LTR10C LTR ERV1 -29 562 244 26 0 0 0 chr2 222519762 222519788 -30736795 + AT_rich Low_complexity Low_complexity 1 26 0 184 200 29 0 chr2 222519905 222519975 -30736608 + CT-rich Low_complexity Low_complexity 2 73 0 288 335 100 24 chr2 222520358 222520698 -30735885 - L1ME LINE L1 -357 5764 5399 574 339 29 40 chr2 222521708 222522083 -30734500 - L2 LINE L2 -1690 1624 1254 823 206 41 0 chr2 222522195 222522365 -30734218 + MER5A DNA MER1_type 3 179 -10 23 54 0 0 chr2 222522673 222522710 -30733873 + AT_rich Low_complexity Low_complexity 1 37 0 233 237 0 0 chr2 222522710 222522769 -30733814 - L1PB1 LINE L1 -2 6149 6091 * 6228 35 4 0 chr2 222522764 222523512 -30733071 - L1PA4 LINE L1 -2 6153 5403 1895 167 0 0 chr2 222523652 222523939 -30732644 - AluJo SINE Alu -25 287 1 25 31 0 0 chr2 222523972 222524004 -30732579 + AT_rich Low_complexity Low_complexity 1 32 0 1754 147 42 3 chr2 222524377 222524663 -30731920 + AluJb SINE Alu 1 297 -15 364 224 75 93 chr2 222525071 222525285 -30731298 + L1MC5 LINE L1 7746 7955 -6 351 306 21 103 chr2 222525776 222526018 -30730565 + MIR SINE MIR 26 247 -15 294 87 0 0 chr2 222526432 222526478 -30730105 + (TG)n Simple_repeat Simple_repeat 2 47 0 450 232 51 22 chr2 222526607 222526745 -30729838 - L2 LINE L2 0 3313 3172 21 71 0 0 chr2 222527182 222527224 -30729359 + AT_rich Low_complexity Low_complexity 1 42 0 633 251 128 10 chr2 222527251 222527446 -30729137 - MIR SINE MIR -39 223 6 1077 293 81 26 chr2 222527455 222527913 -30728670 + MER74B LTR ERVL 66 548 -74 227 221 221 0 chr2 222527848 222527925 -30728658 - MER88 LTR ERVL -292 172 79 * 441 157 50 129 chr2 222528400 222528540 -30728043 + MER57A LTR ERV1 275 403 0 282 188 50 62 chr2 222528741 222528821 -30727762 + L2 LINE L2 3165 3243 -70 26 0 0 0 chr2 222530059 222530085 -30726498 + AT_rich Low_complexity Low_complexity 1 26 0 8004 166 17 26 chr2 222530715 222533039 -30723544 - L1PB1 LINE L1 -38 6829 4529 612 56 0 56 chr2 222533039 222533128 -30723455 - L1PA5 LINE L1 -8 6146 6063 8004 166 17 26 chr2 222533128 222533430 -30723153 - L1PB1 LINE L1 -2338 4529 4226 2298 104 42 21 chr2 222533464 222534301 -30722282 - L1PB1 LINE L1 -5230 1633 634 1060 168 0 20 chr2 222534301 222534504 -30722079 - L1PB1 LINE L1 -6663 200 2 197 403 40 32 chr2 222536926 222537050 -30719533 - L2 LINE L2 -15 3257 3133 551 101 13 0 chr2 222538213 222538292 -30718291 + MADE1 DNA Mariner 1 80 0 * 1300 178 9 99 chr2 222538292 222538633 -30717950 - MLT1A1 LTR MaLR -32 333 24 503 312 42 5 chr2 222538814 222539003 -30717580 - L2 LINE L2 0 3313 3118 746 291 117 109 chr2 222539231 222540224 -30716359 - L2 LINE L2 -526 2788 1788 2144 110 27 0 chr2 222540318 222540618 -30715965 + AluSx SINE Alu 1 308 -4 225 0 0 0 chr2 222541340 222541365 -30715218 + (A)n Simple_repeat Simple_repeat 1 25 0 283 304 276 14 chr2 222542002 222542216 -30714367 + L3 LINE CR1 1012 1281 -296 249 250 50 92 chr2 222542620 222542740 -30713843 - MIR SINE MIR -17 245 131 326 312 206 20 chr2 222542812 222543011 -30713572 + L3 LINE CR1 1341 1576 -1 451 358 24 24 chr2 222543026 222543280 -30713303 + MIR SINE MIR 3 256 -6 5142 134 5 1 chr2 222543471 222543863 -30712720 - L1PA16 LINE L1 0 6817 6428 1540 207 0 20 chr2 222543863 222544162 -30712421 - AluJb SINE Alu -19 293 1 5142 134 5 1 chr2 222544162 222544250 -30712333 - L1PA16 LINE L1 -389 6428 6342 288 0 0 0 chr2 222544250 222544282 -30712301 + (CA)n Simple_repeat Simple_repeat 2 33 0 5142 134 5 1 chr2 222544282 222545235 -30711348 - L1PA16 LINE L1 -475 6342 5381 10169 230 30 16 chr2 222545242 222548935 -30707648 - L1PA16 LINE L1 -1716 5081 1326 1743 306 27 26 chr2 222549018 222549603 -30706980 - L1PA16 LINE L1 -6201 586 1 645 173 73 0 chr2 222550247 222550357 -30706226 - FLAM_C SINE Alu -19 124 7 2380 57 7 10 chr2 222550491 222550789 -30705794 + AluY SINE Alu 1 297 -14 266 70 0 0 chr2 222550886 222550929 -30705654 - L1PA2 LINE L1 -2 6153 6111 582 282 155 3 chr2 222551038 222551354 -30705229 - L1ME LINE L1 -381 5789 5426 1185 322 139 36 chr2 222551763 222553406 -30703177 + L1M4 LINE L1 2180 3992 -2154 982 195 60 9 chr2 222554217 222554432 -30702151 - THE1C LTR MaLR -149 226 1 505 259 58 46 chr2 222555154 222555328 -30701255 + MER5A DNA MER1_type 7 182 -7 980 223 5 0 chr2 222555337 222555525 -30701058 + MER5A DNA MER1_type 1 189 0 23 68 0 0 chr2 222556254 222556298 -30700285 + AT_rich Low_complexity Low_complexity 1 44 0 249 368 48 22 chr2 222557202 222557430 -30699153 + L2 LINE L2 2553 2786 -528 1703 151 3 30 chr2 222557507 222557806 -30698777 + THE1C LTR MaLR 1 291 -84 3246 105 6 2 chr2 222557906 222558374 -30698209 + L1P LINE L1 3391 3860 -2286 41922 60 3 3 chr2 222558382 222564384 -30692199 + L1PA7 LINE L1 1 6002 -152 232 273 30 0 chr2 222564484 222564550 -30692033 + MIR SINE MIR 194 261 -1 21 0 0 0 chr2 222565373 222565394 -30691189 + AT_rich Low_complexity Low_complexity 1 21 0 1179 202 27 0 chr2 222565567 222565790 -30690793 + Charlie1 DNA MER1_type 9 237 -2524 817 176 7 39 chr2 222565795 222565948 -30690635 + AluJo SINE Alu 3 150 -162 348 214 0 24 chr2 222565951 222566035 -30690548 + Charlie1 DNA MER1_type 2679 2760 -1 33 43 0 0 chr2 222566295 222566342 -30690241 + AT_rich Low_complexity Low_complexity 1 47 0 263 98 0 0 chr2 222566497 222566538 -30690045 + MADE1 DNA Mariner 40 80 0 274 223 9 80 chr2 222566560 222566672 -30689911 - L1ME4a LINE L1 -53 6068 5965 517 223 158 55 chr2 222566819 222567129 -30689454 - L1ME4a LINE L1 -375 5746 5405 620 319 77 32 chr2 222567440 222567935 -30688648 + LTR33 LTR ERVL 5 521 0 180 374 72 7 chr2 222568170 222568309 -30688274 + L2 LINE L2 2808 2955 -317 823 134 8 22 chr2 222568344 222568478 -30688105 - FLAM_C SINE Alu -1 132 1 21 0 0 0 chr2 222568694 222568715 -30687868 + AT_rich Low_complexity Low_complexity 1 21 0 188 122 24 0 chr2 222569562 222569603 -30686980 + (CA)n Simple_repeat Simple_repeat 1 42 0 2207 115 0 0 chr2 222570449 222570766 -30685817 - AluSg SINE Alu 0 317 1 221 147 13 53 chr2 222572129 222572204 -30684379 + (CATA)n Simple_repeat Simple_repeat 4 75 0 1965 178 33 0 chr2 222572205 222572542 -30684041 - MER7A DNA MER2_type 0 346 1 237 178 0 0 chr2 222572603 222572648 -30683935 + (TATATG)n Simple_repeat Simple_repeat 4 48 0 385 94 16 0 chr2 222573581 222573645 -30682938 + L1PA7 LINE L1 6090 6154 0 616 219 15 7 chr2 222573658 222573795 -30682788 - MER74A LTR ERVL -420 138 1 718 263 159 14 chr2 222573800 222574095 -30682488 + L1MC4 LINE L1 7506 7757 -238 2054 129 7 7 chr2 222574095 222574390 -30682193 + AluSx SINE Alu 1 295 -17 933 79 0 0 chr2 222574391 222574518 -30682065 + (TA)n Simple_repeat Simple_repeat 1 127 0 718 263 159 14 chr2 222574518 222574591 -30681992 + L1MC4 LINE L1 7756 7981 -14 533 309 4 50 chr2 222575580 222575839 -30680744 - L2 LINE L2 0 3313 3067 24 85 0 0 chr2 222575909 222575968 -30680615 + AT_rich Low_complexity Low_complexity 1 59 0 1555 268 119 19 chr2 222576306 222576836 -30679747 + L2 LINE L2 1885 2467 -847 187 352 14 0 chr2 222576829 222576900 -30679683 + L2 LINE L2 2889 2960 -353 * 683 153 229 0 chr2 222577145 222577315 -30679268 - MER3 DNA MER1_type 0 209 1 2107 97 14 0 chr2 222578390 222578707 -30677876 - AluSx SINE Alu 0 321 1 221 372 87 33 chr2 222578818 222579001 -30677582 - L2 LINE L2 -143 3129 2937 328 311 98 14 chr2 222579885 222580068 -30676515 + MIR3 SINE MIR 21 169 -39 21 36 0 0 chr2 222580237 222580265 -30676318 + AT_rich Low_complexity Low_complexity 1 28 0 2524 138 38 24 chr2 222581073 222581499 -30675084 + MSTB1 LTR MaLR 1 432 0 449 333 8 8 chr2 222581500 222581629 -30674954 - MIR SINE MIR -114 148 20 776 171 0 14 chr2 222581980 222582120 -30674463 - FLAM_C SINE Alu -5 138 1 1662 243 92 68 chr2 222582365 222583347 -30673236 - L1ME3A LINE L1 -9 6161 5160 967 288 46 35 chr2 222583387 222583839 -30672744 + L1M4 LINE L1 4372 4833 -1313 207 0 0 0 chr2 222583839 222583862 -30672721 + (TA)n Simple_repeat Simple_repeat 1 23 0 967 288 46 35 chr2 222583862 222583972 -30672611 + L1M4 LINE L1 4833 4940 -1206 1974 119 41 7 chr2 222584391 222584685 -30671898 - AluSq SINE Alu -9 304 1 247 310 103 29 chr2 222585170 222585344 -30671239 + LTR52 LTR ERVL 15 201 -220 5682 159 206 39 chr2 222585357 222586812 -30669771 - pTR5 LTR ERV1 0 2438 741 389 307 51 7 chr2 222587751 222587888 -30668695 - L2 LINE L2 0 3313 3171 28 61 0 0 chr2 222588191 222588240 -30668343 + AT_rich Low_complexity Low_complexity 1 49 0 207 0 0 0 chr2 222588821 222588844 -30667739 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 24 0 0 0 chr2 222589206 222589230 -30667353 + AT_rich Low_complexity Low_complexity 1 24 0 370 103 35 0 chr2 222589526 222589584 -30666999 + THE1B-int LTR MaLR 1521 1580 0 2408 109 25 8 chr2 222589584 222589942 -30666641 + THE1B LTR MaLR 1 364 0 321 269 112 0 chr2 222590015 222590149 -30666434 + Charlie7 DNA MER1_type 5 153 -2459 182 258 43 43 chr2 222590241 222590334 -30666249 + L2 LINE L2 3221 3313 0 1950 189 8 24 chr2 222590476 222590847 -30665736 - MLT1A1 LTR MaLR 0 365 1 441 206 22 0 chr2 222591618 222591710 -30664873 - MER94 DNA DNA -40 94 1 236 182 91 0 chr2 222591710 222591762 -30664821 + MER113 DNA MER1_type? 465 521 0 194 231 192 0 chr2 222592575 222592627 -30663956 - MIR3 SINE MIR -20 188 127 1077 211 56 7 chr2 222593609 222593893 -30662690 + L1M4 LINE L1 4563 4860 -1286 21 71 0 0 chr2 222593905 222593947 -30662636 + AT_rich Low_complexity Low_complexity 1 42 0 245 111 0 0 chr2 222593947 222593983 -30662600 + L1MA8 LINE L1 6242 6277 -14 * 1383 164 48 11 chr2 222593981 222594250 -30662333 - L1MA8 LINE L1 -323 5968 5690 439 220 26 131 chr2 222594252 222594412 -30662171 + L1M4 LINE L1 4845 5020 -1126 1638 166 6 38 chr2 222594412 222594726 -30661857 - AluJo SINE Alu -7 305 2 439 220 26 131 chr2 222594726 222594768 -30661815 + L1M4 LINE L1 5020 5016 -1130 541 197 0 129 chr2 222594768 222594915 -30661668 - FLAM_A SINE Alu -5 128 1 439 220 26 131 chr2 222594915 222594979 -30661604 + L1M4 LINE L1 5015 5084 -1062 199 266 31 0 chr2 222595329 222595393 -30661190 - L2 LINE L2 -456 2858 2793 24 0 0 0 chr2 222595487 222595511 -30661072 + AT_rich Low_complexity Low_complexity 1 24 0 261 146 0 0 chr2 222597219 222597267 -30659316 + (CA)n Simple_repeat Simple_repeat 2 49 0 217 27 81 0 chr2 222597719 222597756 -30658827 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 2255 78 0 4 chr2 222597756 222598037 -30658546 - AluSx SINE Alu -32 280 1 181 372 71 0 chr2 222599066 222599179 -30657404 + L2 LINE L2 2294 2414 -900 23 0 0 0 chr2 222600842 222600865 -30655718 + AT_rich Low_complexity Low_complexity 1 23 0 272 346 54 15 chr2 222600871 222601001 -30655582 + L2 LINE L2 3179 3313 0 288 245 86 72 chr2 222601065 222601204 -30655379 - MIR3 SINE MIR -63 145 6 206 322 182 8 chr2 222601266 222601387 -30655196 + MIR3 SINE MIR 50 191 -17 6543 12 0 0 chr2 222601570 222602308 -30654275 + L1HS LINE L1 5402 6139 -16 204 67 0 0 chr2 222602308 222602338 -30654245 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 246 311 0 37 chr2 222603560 222603724 -30652859 + (CATATA)n Simple_repeat Simple_repeat 4 161 0 186 43 0 0 chr2 222604432 222604455 -30652128 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 284 240 13 13 chr2 222605746 222605821 -30650762 - MLT1L LTR MaLR -538 77 3 228 35 0 0 chr2 222606460 222606489 -30650094 + (T)n Simple_repeat Simple_repeat 1 29 0 359 314 133 42 chr2 222608743 222609240 -30647343 + L2 LINE L2 2575 3089 -224 2744 7 0 0 chr2 222609643 222609938 -30646645 + AluYa5 SINE Alu 1 295 -16 227 111 0 22 chr2 222610644 222610689 -30645894 + (TTTTA)n Simple_repeat Simple_repeat 4 47 0 2024 149 0 7 chr2 222610691 222611000 -30645583 - AluSx SINE Alu -5 307 1 26 30 0 0 chr2 222611294 222611327 -30645256 + AT_rich Low_complexity Low_complexity 1 33 0 24 0 0 0 chr2 222611447 222611471 -30645112 + AT_rich Low_complexity Low_complexity 1 24 0 482 322 178 15 chr2 222612496 222612906 -30643677 - L2 LINE L2 -7 3306 2830 208 250 0 0 chr2 222613425 222613465 -30643118 + (TTCA)n Simple_repeat Simple_repeat 2 41 0 186 200 0 25 chr2 222613465 222613505 -30643078 - L2 LINE L2 0 3272 3234 200 225 0 0 chr2 222613739 222613779 -30642804 + GA-rich Low_complexity Low_complexity 3 42 0 420 202 11 43 chr2 222614600 222614694 -30641889 + AluJ/FLAM SINE Alu 5 95 -217 1971 130 29 37 chr2 222615158 222615534 -30641049 + THE1C LTR MaLR 3 375 0 1367 247 50 16 chr2 222615890 222616270 -30640313 - MSTD LTR MaLR -3 393 1 22 70 0 0 chr2 222616386 222616429 -30640154 + AT_rich Low_complexity Low_complexity 1 43 0 2290 107 0 3 chr2 222616650 222616950 -30639633 + AluSp SINE Alu 1 299 -14 1562 190 3 21 chr2 222616961 222617251 -30639332 + AluJb SINE Alu 1 285 -27 187 267 64 64 chr2 222617330 222617517 -30639066 + L2 LINE L2 2850 3036 -236 221 0 35 0 chr2 222617688 222617717 -30638866 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 198 118 0 0 chr2 222617953 222617987 -30638596 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 771 247 75 22 chr2 222618390 222618617 -30637966 + MIR SINE MIR 13 251 -11 1504 173 52 0 chr2 222619716 222619965 -30636618 - Tigger7 DNA MER2_type -470 263 2 387 0 0 0 chr2 222620047 222620090 -30636493 + (TG)n Simple_repeat Simple_repeat 2 44 0 434 112 0 11 chr2 222620775 222620864 -30635719 + (TG)n Simple_repeat Simple_repeat 1 88 0 212 59 29 0 chr2 222621324 222621358 -30635225 + (TG)n Simple_repeat Simple_repeat 2 36 0 198 71 0 0 chr2 222622123 222622151 -30634432 + (GGA)n Simple_repeat Simple_repeat 3 30 0 515 294 28 7 chr2 222622367 222622510 -30634073 + MIR SINE MIR 117 262 0 706 105 46 39 chr2 222622676 222622817 -30633766 + L1PBa LINE L1 1764 1995 -4867 21 36 0 0 chr2 222623836 222623864 -30632719 + AT_rich Low_complexity Low_complexity 1 28 0 2025 132 0 20 chr2 222623905 222624208 -30632375 - AluSx SINE Alu -15 297 1 23 33 0 0 chr2 222624250 222624280 -30632303 + AT_rich Low_complexity Low_complexity 1 30 0 416 235 71 10 chr2 222625180 222625278 -30631305 - MIR3 SINE MIR -26 182 79 3003 36 0 0 chr2 222625310 222625669 -30630914 - L1PA3 LINE L1 -2 6153 5795 1806 176 5 47 chr2 222626080 222626461 -30630122 - MER47A DNA MER2_type -1 365 1 252 287 53 0 chr2 222627032 222627126 -30629457 + L1ME LINE L1 5625 5723 -398 979 258 109 112 chr2 222627372 222627847 -30628736 + MLT1G1 LTR MaLR 9 483 -112 1632 196 44 31 chr2 222627847 222628235 -30628348 + MSTD LTR MaLR 4 396 0 979 258 109 112 chr2 222628235 222628348 -30628235 + MLT1G1 LTR MaLR 483 595 0 975 355 77 36 chr2 222629204 222630308 -30626275 - L2 LINE L2 -213 3059 1914 188 328 17 0 chr2 222630577 222630635 -30625948 - MIR SINE MIR -116 146 88 935 9 0 9 chr2 222631627 222631740 -30624843 + (GAAA)n Simple_repeat Simple_repeat 2 113 0 275 275 183 28 chr2 222631887 222632029 -30624554 + MLT1L LTR MaLR 120 283 -332 357 62 0 0 chr2 222632188 222632236 -30624347 + (CA)n Simple_repeat Simple_repeat 2 49 0 1756 202 121 79 chr2 222633153 222633747 -30622836 + L1MC4 LINE L1 6461 7079 -963 1096 226 23 0 chr2 222633756 222634017 -30622566 + L1MC4 LINE L1 7238 7504 -538 1805 234 36 14 chr2 222634017 222634044 -30622539 - MER74A LTR ERVL 0 558 533 13486 142 37 15 chr2 222634044 222635192 -30621391 + Tigger1 DNA MER2_type 1 1122 -1296 2312 77 3 14 chr2 222635192 222635489 -30621094 + AluSq SINE Alu 1 294 -19 13486 142 37 15 chr2 222635489 222636706 -30619877 + Tigger1 DNA MER2_type 1122 2418 0 1805 234 36 14 chr2 222636706 222637096 -30619487 - MER74A LTR ERVL -25 533 132 16756 112 7 16 chr2 222637105 222640041 -30616542 + L1P3 LINE L1 748 3676 -2785 222 290 131 28 chr2 222641079 222641224 -30615359 - MIR SINE MIR -12 250 91 213 237 116 41 chr2 222641278 222641410 -30615173 - MIR SINE MIR -51 157 50 853 247 78 9 chr2 222641568 222641799 -30614784 + MIR SINE MIR 16 262 0 1837 246 23 34 chr2 222643772 222644109 -30612474 + L1ME3 LINE L1 5612 5942 -220 2291 94 3 0 chr2 222644109 222644408 -30612175 + AluSc SINE Alu 1 300 -9 1837 246 23 34 chr2 222644408 222644627 -30611956 + L1ME3 LINE L1 5942 6162 0 286 342 31 31 chr2 222644698 222644859 -30611724 + MIR SINE MIR 97 257 -5 255 299 124 7 chr2 222644827 222644964 -30611619 - MIR SINE MIR -10 252 100 * 572 248 80 35 chr2 222645289 222645613 -30610970 + LTR43 LTR ERV1 187 440 -46 236 375 10 10 chr2 222645673 222645769 -30610814 - MIR SINE MIR -164 98 3 410 271 88 53 chr2 222646150 222646320 -30610263 - MIR SINE MIR -30 232 57 2194 119 0 0 chr2 222646735 222647030 -30609553 + AluSx SINE Alu 3 297 -15 783 162 70 40 chr2 222647127 222647399 -30609184 - L1MC5 LINE L1 -223 7738 7459 3868 171 38 27 chr2 222647474 222648314 -30608269 - L1MA7 LINE L1 -91 6200 5352 47 33 0 0 chr2 222648314 222648375 -30608208 + AT_rich Low_complexity Low_complexity 1 61 0 1904 158 0 0 chr2 222648378 222648669 -30607914 - AluSx SINE Alu -21 291 1 11515 198 24 27 chr2 222648669 222649197 -30607386 - L1PA16 LINE L1 -11 6155 5627 2184 109 0 23 chr2 222649197 222649500 -30607083 - AluSx SINE Alu -16 296 1 11515 198 24 27 chr2 222649500 222650794 -30605789 - L1PA16 LINE L1 -539 5627 4332 2453 73 0 6 chr2 222650794 222651107 -30605476 + AluY SINE Alu 1 311 0 11515 198 24 27 chr2 222651107 222653031 -30603552 - L1PA16 LINE L1 -1834 4332 2423 300 326 0 0 chr2 222653131 222653229 -30603354 + L1PA12 LINE L1 2085 2182 -5399 428 125 10 39 chr2 222653359 222653463 -30603120 + (GAAA)n Simple_repeat Simple_repeat 2 102 0 1911 128 10 104 chr2 222654103 222654516 -30602067 - THE1C LTR MaLR 0 375 2 910 252 67 8 chr2 222655135 222655373 -30601210 - MIR SINE MIR -2 260 9 1949 199 19 7 chr2 222655420 222655842 -30600741 + L1MB7 LINE L1 5676 6102 -82 2322 87 6 13 chr2 222656246 222656558 -30600025 - AluSg SINE Alu 0 310 1 245 340 99 5 chr2 222656771 222656983 -30599600 - L2 LINE L2 -597 2717 2486 * 252 284 128 9 chr2 222656975 222657084 -30599499 + L2 LINE L2 3192 3313 0 2200 85 7 29 chr2 222657162 222657469 -30599114 - AluY SINE Alu -11 300 1 345 359 96 31 chr2 222657482 222657836 -30598747 - L2 LINE L2 -901 2413 2037 321 230 72 65 chr2 222658711 222658850 -30597733 - L2 LINE L2 -3 3310 3171 1056 320 74 8 chr2 222658896 222659290 -30597293 + L2 LINE L2 2868 3287 -26 592 366 64 20 chr2 222659425 222659928 -30596655 - L2 LINE L2 -355 2959 2435 492 301 74 12 chr2 222660268 222660431 -30596152 - MIR SINE MIR -82 180 8 2048 96 68 0 chr2 222661244 222661524 -30595059 - AluSc SINE Alu -10 299 1 1672 76 4 9 chr2 222662464 222662689 -30593894 + AluSc SINE Alu 86 309 0 240 35 0 0 chr2 222764755 222764784 -30491799 + (TTCC)n Simple_repeat Simple_repeat 3 31 0 1921 133 13 3 chr2 222766929 222767238 -30489345 - L1P4 LINE L1 -447 5719 5408 21 0 0 0 chr2 222767357 222767378 -30489205 + AT_rich Low_complexity Low_complexity 1 21 0 503 300 106 0 chr2 222768934 222769104 -30487479 + MIR SINE MIR 5 192 -70 28 29 0 0 chr2 222769125 222769160 -30487423 + AT_rich Low_complexity Low_complexity 1 35 0 258 345 76 0 chr2 222769812 222769931 -30486652 + MIR SINE MIR 2 129 -133 398 368 8 0 chr2 222769972 222770089 -30486494 + L2 LINE L2 3149 3266 -6 369 346 87 30 chr2 222770144 222770375 -30486208 + L2 LINE L2 2715 2958 -356 608 224 82 7 chr2 222770606 222770753 -30485830 + MLT2E LTR ERVL 469 626 -2 2108 290 30 48 chr2 222771078 222771355 -30485228 + ERVL LTR ERVL 1058 1338 -4426 2269 74 0 10 chr2 222771355 222771653 -30484930 - AluY SINE Alu -16 295 1 2108 290 30 48 chr2 222771653 222772238 -30484345 + ERVL LTR ERVL 1338 1905 -3859 180 211 105 35 chr2 222772426 222772483 -30484100 + MIR SINE MIR 27 87 -121 23 0 0 0 chr2 222774293 222774316 -30482267 + AT_rich Low_complexity Low_complexity 1 23 0 1668 148 92 0 chr2 222775314 222775585 -30480998 - AluSx SINE Alu -16 296 1 218 416 48 30 chr2 222776691 222776857 -30479726 - L2 LINE L2 -76 3196 3028 333 268 168 26 chr2 222777216 222777406 -30479177 - L2 LINE L2 -973 2341 2125 1277 305 109 19 chr2 222777549 222778018 -30478565 + MER115 DNA AcHobo 183 693 0 1059 337 77 50 chr2 222778042 222779132 -30477451 - L2 LINE L2 -1275 2039 921 29 0 0 0 chr2 222779288 222779317 -30477266 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr2 222779460 222779483 -30477100 + AT_rich Low_complexity Low_complexity 1 23 0 680 114 84 23 chr2 222780338 222780469 -30476114 + MER85 DNA T2_type 1 139 0 26 0 0 0 chr2 222781098 222781124 -30475459 + AT_rich Low_complexity Low_complexity 1 26 0 281 260 41 0 chr2 222781475 222781548 -30475035 + MLT1D LTR MaLR 12 87 -418 23 54 0 0 chr2 222781577 222781614 -30474969 + AT_rich Low_complexity Low_complexity 1 37 0 1346 237 91 25 chr2 222781614 222782010 -30474573 + MLT1D LTR MaLR 84 505 0 23 0 0 0 chr2 222785011 222785034 -30471549 + AT_rich Low_complexity Low_complexity 1 23 0 393 305 85 24 chr2 222785284 222785448 -30471135 - L2 LINE L2 0 3272 3099 21 0 0 0 chr2 222788713 222788734 -30467849 + AT_rich Low_complexity Low_complexity 1 21 0 225 65 0 0 chr2 222789136 222789167 -30467416 + (TA)n Simple_repeat Simple_repeat 1 31 0 811 240 83 8 chr2 222791680 222791922 -30464661 - MIR SINE MIR 0 262 3 185 317 32 57 chr2 222792569 222792692 -30463891 + L2 LINE L2 1893 2012 -1302 234 380 0 19 chr2 222792828 222792936 -30463647 + L2 LINE L2 2225 2330 -984 281 415 136 7 chr2 222793199 222793493 -30463090 + L2 LINE L2 2935 3266 -6 28 0 0 0 chr2 222793849 222793877 -30462706 + AT_rich Low_complexity Low_complexity 1 28 0 272 371 34 69 chr2 222794387 222794678 -30461905 + L2 LINE L2 2991 3271 -1 543 314 27 11 chr2 222795952 222796137 -30460446 + MIR SINE MIR 4 191 -71 1835 142 7 27 chr2 222796290 222796586 -30459997 - AluSx SINE Alu -22 290 1 466 320 20 0 chr2 222797428 222797581 -30459002 - MIR SINE MIR -5 257 102 26 0 0 0 chr2 222798764 222798790 -30457793 + AT_rich Low_complexity Low_complexity 1 26 0 236 248 168 40 chr2 222799951 222800052 -30456531 + L2 LINE L2 3200 3313 0 225 311 57 16 chr2 222801043 222801165 -30455418 + MER117 DNA MER1_type 9 135 -62 1630 228 27 73 chr2 222801348 222801871 -30454712 - MLT2B1 LTR ERVL 0 520 22 219 69 0 0 chr2 222803341 222803370 -30453213 + (A)n Simple_repeat Simple_repeat 1 29 0 1008 296 141 68 chr2 222803383 222804028 -30452555 - MER115 DNA AcHobo -1 692 1 843 233 24 24 chr2 222804591 222804801 -30451782 - MER63A DNA MER1_type 0 210 1 192 40 0 0 chr2 222805240 222805265 -30451318 + (A)n Simple_repeat Simple_repeat 1 25 0 1707 190 76 78 chr2 222806010 222806248 -30450335 + MLT1D LTR MaLR 18 255 -250 1807 45 5 0 chr2 222806248 222806469 -30450114 + AluY SINE Alu 1 222 -89 1707 190 76 78 chr2 222806469 222806719 -30449864 + MLT1D LTR MaLR 255 505 0 195 326 23 23 chr2 222808239 222808325 -30448258 + L2 LINE L2 2303 2388 -926 560 308 14 43 chr2 222808436 222808644 -30447939 + MIR SINE MIR 47 248 -14 583 310 152 58 chr2 222809386 222810134 -30446449 + L2 LINE L2 1796 2614 -700 2373 66 3 3 chr2 222810390 222810691 -30445892 - AluY SINE Alu -10 301 1 231 394 0 52 chr2 222811569 222811724 -30444859 + L2 LINE L2 3125 3271 -1 200 255 10 88 chr2 222812067 222812169 -30444414 - MIR SINE MIR -95 167 74 225 326 47 12 chr2 222814670 222814756 -30441827 - L2 LINE L2 0 3313 3225 220 352 42 0 chr2 222814902 222814973 -30441610 - MIR SINE MIR -115 93 20 2003 155 3 19 chr2 222815472 222815788 -30440795 + AluSx SINE Alu 1 311 -1 263 356 80 3 chr2 222815972 222816284 -30440299 - L1MC/D LINE L1 -1920 5888 5553 307 271 123 13 chr2 222816304 222816459 -30440124 - L1MC/D LINE L1 -2301 5507 5336 193 308 128 8 chr2 222817024 222817141 -30439442 + MIR SINE MIR 86 216 -46 280 345 115 14 chr2 222817198 222817337 -30439246 + MIR3 SINE MIR 15 167 -41 644 277 53 21 chr2 222817531 222817719 -30438864 - MLT2E LTR ERVL -369 259 66 298 238 175 7 chr2 222817760 222817903 -30438680 - Ricksha DNA DNA -2894 352 186 * 912 296 38 6 chr2 222817882 222818196 -30438387 - ERVL LTR ERVL -2830 2934 2611 515 101 0 22 chr2 222818241 222818330 -30438253 + (TCTA)n Simple_repeat Simple_repeat 4 90 0 1847 276 75 24 chr2 222818331 222818961 -30437622 - ERVL LTR ERVL -2973 2512 1851 1195 138 0 5 chr2 222819067 222819256 -30437327 - L1PB1 LINE L1 -32 6119 5932 2395 74 0 0 chr2 222820046 222820369 -30436214 + AluY SINE Alu 1 311 0 186 339 0 0 chr2 222820591 222820653 -30435930 - L2 LINE L2 -1054 2260 2199 1404 276 58 7 chr2 222820707 222821124 -30435459 - L2 LINE L2 -1339 1975 1538 1054 184 44 0 chr2 222822737 222822943 -30433640 - MER82 DNA MER2_type -377 276 62 285 307 55 39 chr2 222823392 222823519 -30433064 + MIR SINE MIR 20 148 -114 21 57 0 0 chr2 222824455 222824490 -30432093 + AT_rich Low_complexity Low_complexity 1 35 0 315 291 23 0 chr2 222824963 222825049 -30431534 + MIR SINE MIR 76 163 -99 264 100 0 0 chr2 222827810 222827850 -30428733 + (CA)n Simple_repeat Simple_repeat 2 41 0 583 311 54 14 chr2 222829222 222829444 -30427139 + MIR SINE MIR 2 232 -30 228 390 52 15 chr2 222831586 222831722 -30424861 - MIR3 SINE MIR -62 146 6 230 154 0 58 chr2 222832602 222832654 -30423929 + (CACCC)n Simple_repeat Simple_repeat 3 51 0 479 69 14 0 chr2 222833910 222833982 -30422601 + (TTTA)n Simple_repeat Simple_repeat 1 73 0 2085 112 0 0 chr2 222833984 222834260 -30422323 - AluSx SINE Alu -36 276 1 364 324 37 107 chr2 222835340 222835695 -30420888 - L2 LINE L2 -18 3254 2925 850 318 104 30 chr2 222835799 222836397 -30420186 - L2 LINE L2 -428 2886 2243 378 0 0 0 chr2 222836397 222836439 -30420144 + (CA)n Simple_repeat Simple_repeat 1 42 0 420 188 160 83 chr2 222836451 222836595 -30419988 - Tigger3(Golem) DNA MER2_type 0 3038 2884 680 175 0 0 chr2 222836730 222836833 -30419750 - Tigger3(Golem) DNA MER2_type -2925 104 2 1790 172 0 3 chr2 222837059 222837362 -30419221 + AluJo SINE Alu 11 312 0 21 36 0 0 chr2 222838330 222838358 -30418225 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 222838532 222838554 -30418029 + AT_rich Low_complexity Low_complexity 1 22 0 1164 140 59 56 chr2 222838555 222838841 -30417742 - MER33 DNA MER1_type 0 324 38 405 301 67 43 chr2 222838897 222839106 -30417477 - MIR SINE MIR 0 262 49 225 216 60 9 chr2 222839111 222839227 -30417356 + (TTATA)n Simple_repeat Simple_repeat 4 125 0 222 321 118 37 chr2 222839717 222839904 -30416679 - L2 LINE L2 -411 2903 2702 461 307 62 30 chr2 222839978 222840186 -30416397 - MIR SINE MIR -48 214 3 331 275 11 11 chr2 222840889 222840980 -30415603 - MIR3 SINE MIR -5 203 113 855 263 54 0 chr2 222842388 222842593 -30413990 + MIR SINE MIR 41 256 -6 21 0 0 0 chr2 222843507 222843528 -30413055 + GC_rich Low_complexity Low_complexity 1 21 0 374 306 25 0 chr2 222848406 222848527 -30408056 + MIR3 SINE MIR 74 197 -11 1605 122 0 0 chr2 222852415 222852629 -30403954 + AluSx SINE Alu 1 214 -98 22 0 0 0 chr2 222853991 222854013 -30402570 + AT_rich Low_complexity Low_complexity 1 22 0 2177 130 0 0 chr2 222854226 222854533 -30402050 + AluSx SINE Alu 1 307 -5 22 0 0 0 chr2 222854533 222854555 -30402028 + AT_rich Low_complexity Low_complexity 1 22 0 272 320 167 29 chr2 222857619 222857925 -30398658 - L2 LINE L2 -2 3311 2964 24 32 0 0 chr2 222858260 222858291 -30398292 + AT_rich Low_complexity Low_complexity 1 31 0 182 317 122 24 chr2 222858811 222858934 -30397649 + L2 LINE L2 3173 3307 -6 269 349 71 38 chr2 222858936 222859303 -30397280 + L2 LINE L2 2270 2648 -666 21 36 0 0 chr2 222859899 222859927 -30396656 + AT_rich Low_complexity Low_complexity 1 28 0 851 271 112 46 chr2 222860240 222861143 -30395440 - HAL1 LINE L1 0 2507 1407 2030 237 65 15 chr2 222861338 222861997 -30394586 - L1M4 LINE L1 -1137 5009 4318 601 93 23 0 chr2 222862001 222862087 -30394496 + L1M2 LINE L1 5665 5752 -539 2066 234 72 36 chr2 222862125 222862898 -30393685 - L1M4 LINE L1 -2155 3991 3191 1098 202 4 40 chr2 222862913 222863185 -30393398 + MER119 DNA MER1_type 322 583 0 237 236 0 109 chr2 222863859 222863969 -30392614 - MER103 DNA DNA -49 117 20 2212 97 0 25 chr2 222864103 222864422 -30392161 - AluSx SINE Alu -1 311 1 219 316 0 98 chr2 222866342 222866475 -30390108 - MIR3 SINE MIR -1 207 88 2259 95 14 0 chr2 222867406 222867702 -30388881 + AluSq SINE Alu 1 300 -13 21 82 0 0 chr2 222867964 222868013 -30388570 + AT_rich Low_complexity Low_complexity 1 49 0 216 191 0 0 chr2 222869858 222869900 -30386683 + (TTCA)n Simple_repeat Simple_repeat 2 43 0 212 246 35 18 chr2 222869908 222869965 -30386618 - L2 LINE L2 0 3272 3215 369 259 117 19 chr2 222871595 222871755 -30384828 - MIR SINE MIR -62 146 20 485 181 57 0 chr2 222872263 222872368 -30384215 - L1MB4 LINE L1 -3 6177 6067 313 234 26 0 chr2 222873062 222873139 -30383444 + HsTC2 DNA Tc2 2 80 -1818 805 242 78 14 chr2 222873429 222873648 -30382935 + MIR SINE MIR 28 260 -2 1620 274 178 14 chr2 222873657 222874644 -30381939 + L2 LINE L2 2170 3313 0 252 0 0 0 chr2 222874789 222874817 -30381766 + (T)n Simple_repeat Simple_repeat 1 28 0 308 290 75 11 chr2 222875377 222875470 -30381113 + MIR SINE MIR 16 114 -148 21 95 0 0 chr2 222875774 222875837 -30380746 + AT_rich Low_complexity Low_complexity 1 63 0 187 304 29 14 chr2 222876159 222876228 -30380355 + L2 LINE L2 2686 2755 -559 859 316 62 36 chr2 222876243 222876664 -30379919 - L2 LINE L2 0 3313 2882 358 159 7 3 chr2 222876665 222876788 -30379795 + AluJ/FRAM SINE Alu 232 319 0 1410 157 78 0 chr2 222876976 222877061 -30379522 + AluJo SINE Alu 36 113 -199 279 0 0 0 chr2 222877061 222877092 -30379491 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1410 157 78 0 chr2 222877092 222877248 -30379335 + AluJo SINE Alu 113 296 -16 685 302 249 33 chr2 222877256 222877835 -30378748 - L2 LINE L2 -592 2722 2019 306 125 0 0 chr2 222877835 222877883 -30378700 + (ATG)n Simple_repeat Simple_repeat 3 50 0 831 269 75 0 chr2 222877895 222878096 -30378487 - MIR SINE MIR -33 229 14 543 278 49 41 chr2 222878161 222878427 -30378156 - L2 LINE L2 -1335 1979 1712 940 289 50 35 chr2 222878428 222878850 -30377733 - LTR16B LTR ERVL 0 464 37 5156 123 36 32 chr2 222879210 222880080 -30376503 + L1MB1 LINE L1 5293 6165 -3 21 0 0 0 chr2 222881456 222881477 -30375106 + AT_rich Low_complexity Low_complexity 1 21 0 2304 65 3 0 chr2 222881999 222882292 -30374291 - AluY SINE Alu -17 294 1 21 0 0 0 chr2 222882292 222882313 -30374270 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 222882840 222882863 -30373720 + AT_rich Low_complexity Low_complexity 1 23 0 251 264 99 58 chr2 222886484 222886605 -30369978 - MIR3 SINE MIR -2 206 81 * 533 322 35 31 chr2 222886602 222886829 -30369754 + MIR SINE MIR 23 250 -12 29 0 0 0 chr2 222886959 222886988 -30369595 + AT_rich Low_complexity Low_complexity 1 29 0 273 309 32 11 chr2 222887757 222887851 -30368732 + L2 LINE L2 2603 2698 -616 326 267 119 40 chr2 222888363 222888565 -30368018 - LTR33 LTR ERVL 0 521 304 253 267 0 114 chr2 222888666 222888771 -30367812 - LTR33 LTR ERVL -399 122 30 193 319 189 12 chr2 222890521 222890690 -30365893 - MIR SINE MIR -44 218 20 21 0 0 0 chr2 222891066 222891087 -30365496 + AT_rich Low_complexity Low_complexity 1 21 0 320 317 117 40 chr2 222891171 222891496 -30365087 + L2 LINE L2 1527 1876 -1438 3217 196 77 36 chr2 222891732 222893113 -30363470 - L1ME1 LINE L1 -5 6161 4709 195 42 0 0 chr2 222893113 222893137 -30363446 + (TTTCC)n Simple_repeat Simple_repeat 3 26 0 256 322 104 65 chr2 222893293 222893756 -30362827 + L2 LINE L2 2248 2728 -586 245 276 0 0 chr2 222897087 222897145 -30359438 + L2 LINE L2 3211 3268 -4 301 320 112 4 chr2 222897154 222897423 -30359160 + L1ME4a LINE L1 5735 6032 -89 2198 116 0 7 chr2 222897427 222897737 -30358846 - AluSx SINE Alu -4 308 1 22 0 0 0 chr2 222897780 222897802 -30358781 + AT_rich Low_complexity Low_complexity 1 22 0 24 96 0 0 chr2 222898080 222898153 -30358430 + AT_rich Low_complexity Low_complexity 1 73 0 323 278 86 20 chr2 222898283 222898434 -30358149 - L1MC4a LINE L1 -1925 5883 5723 194 254 91 18 chr2 222898434 222898489 -30358094 - L2 LINE L2 -4 3268 3210 * 242 284 15 0 chr2 222898457 222898524 -30358059 - MIR SINE MIR -25 237 170 4402 134 20 4 chr2 222898561 222899276 -30357307 + L1MA4 LINE L1 5489 6214 -86 811 192 54 24 chr2 222899310 222899477 -30357106 - MIR SINE MIR -85 177 6 277 266 120 51 chr2 222899646 222899920 -30356663 + L2 LINE L2 1915 2207 -1107 915 179 118 5 chr2 222900798 222900993 -30355590 - Tigger1 DNA MER2_type -2 2416 2200 1446 156 0 63 chr2 222900993 222901263 -30355320 + AluJb SINE Alu 1 253 -59 13399 137 26 8 chr2 222901282 222903448 -30353135 - Tigger1 DNA MER2_type -213 2205 1 267 327 35 9 chr2 222903675 222903788 -30352795 + MIR SINE MIR 135 250 -12 342 286 9 9 chr2 222903794 222903899 -30352684 + L2 LINE L2 3112 3216 -97 210 308 105 69 chr2 222903905 222904152 -30352431 - L2 LINE L2 -92 3221 2966 481 295 107 21 chr2 222904198 222904432 -30352151 - L2 LINE L2 -412 2902 2649 229 306 0 16 chr2 222904429 222904491 -30352092 + MIR SINE MIR 8 68 -194 * 2240 97 7 3 chr2 222906590 222906900 -30349683 - AluY SINE Alu 0 311 1 23 0 0 0 chr2 222907543 222907566 -30349017 + AT_rich Low_complexity Low_complexity 1 23 0 1326 86 5 43 chr2 222908713 222908923 -30347660 - L1PA13 LINE L1 -4 6159 5958 2337 82 0 0 chr2 222909381 222909673 -30346910 + AluSx SINE Alu 5 296 -16 1619 107 0 0 chr2 222909927 222910143 -30346440 - AluY SINE Alu -95 216 1 207 0 0 0 chr2 222910428 222910451 -30346132 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 275 304 16 96 chr2 222910571 222910696 -30345887 - MIR3 SINE MIR -86 122 8 208 247 164 0 chr2 222910760 222910833 -30345750 + MIR SINE MIR 7 91 -171 37 39 0 0 chr2 222911383 222911434 -30345149 + AT_rich Low_complexity Low_complexity 1 51 0 182 314 0 0 chr2 222911540 222911591 -30344992 + MIR SINE MIR 199 249 -13 216 0 0 0 chr2 222911725 222911749 -30344834 + (CA)n Simple_repeat Simple_repeat 2 25 0 1922 164 9 23 chr2 222912091 222912433 -30344150 - MER1B DNA MER1_type 0 337 1 1209 272 140 19 chr2 222912480 222912943 -30343640 + LTR33 LTR ERVL 1 519 -2 250 146 0 0 chr2 222913483 222913524 -30343059 - L1MA10 LINE L1 -8 6326 6286 480 160 11 21 chr2 222913538 222913632 -30342951 - MER33 DNA MER1_type -231 93 1 2254 321 72 27 chr2 222913799 222916210 -30340373 + ERVL LTR ERVL 2425 5013 -751 23 33 0 0 chr2 222917970 222918000 -30338583 + AT_rich Low_complexity Low_complexity 1 30 0 327 356 62 16 chr2 222918742 222918936 -30337647 - MIR SINE MIR -54 208 6 315 320 92 26 chr2 222918951 222919104 -30337479 - MIR3 SINE MIR -15 193 31 21 0 0 0 chr2 222921892 222921913 -30334670 + AT_rich Low_complexity Low_complexity 1 21 0 1962 120 32 0 chr2 222922512 222922795 -30333788 + AluSx SINE Alu 1 292 -20 23 33 0 0 chr2 222923457 222923487 -30333096 + AT_rich Low_complexity Low_complexity 1 30 0 288 236 79 31 chr2 222923788 222923915 -30332668 + MARNA DNA Mariner 154 286 -300 328 278 30 30 chr2 222924022 222924155 -30332428 - MARNA DNA Mariner -443 143 11 333 366 105 6 chr2 222924188 222924360 -30332223 + MIR3 SINE MIR 6 194 -14 429 200 0 0 chr2 222926918 222927003 -30329580 + MIR SINE MIR 129 213 -49 189 226 0 57 chr2 222927022 222927075 -30329508 + MIR SINE MIR 152 201 -61 239 267 35 12 chr2 222927487 222927573 -30329010 - L1MC/D LINE L1 -2012 5796 5709 552 269 87 25 chr2 222927594 222927856 -30328727 - L1MC/D LINE L1 -743 5403 5192 29 47 0 0 chr2 222930626 222930669 -30325914 + AT_rich Low_complexity Low_complexity 1 43 0 28 0 0 0 chr2 222931017 222931045 -30325538 + AT_rich Low_complexity Low_complexity 1 28 0 259 331 23 23 chr2 222931884 222932017 -30324566 + MIR SINE MIR 16 148 -60 198 103 0 0 chr2 222932093 222932122 -30324461 + (TAA)n Simple_repeat Simple_repeat 1 29 0 289 396 36 36 chr2 222933312 222933643 -30322940 + L2 LINE L2 2580 2910 -404 218 311 132 0 chr2 222933872 222933978 -30322605 + L2 LINE L2 3191 3310 -3 563 301 24 7 chr2 222934099 222934331 -30322252 - MIR SINE MIR -6 256 20 180 0 0 0 chr2 222935239 222935259 -30321324 + (TTG)n Simple_repeat Simple_repeat 2 21 0 595 304 73 15 chr2 222935548 222935752 -30320831 + MIR SINE MIR 2 217 -45 383 215 151 0 chr2 222936186 222936279 -30320304 - L2 LINE L2 -6 3266 3160 205 239 60 75 chr2 222936887 222936954 -30319629 + MIR SINE MIR 82 147 -61 315 0 0 0 chr2 222937454 222937489 -30319094 + (CA)n Simple_repeat Simple_repeat 2 36 0 181 367 220 0 chr2 222939102 222939211 -30317372 - L2 LINE L2 -4 3268 3136 181 299 104 0 chr2 222939539 222939616 -30316967 - MIR SINE MIR -65 197 113 328 275 84 30 chr2 222940011 222940142 -30316441 - L2 LINE L2 0 3313 3176 598 101 0 11 chr2 222942254 222942343 -30314240 - AluSc SINE Alu -16 293 206 1288 165 121 48 chr2 222942762 222943077 -30313506 - MER7A DNA MER2_type -10 336 1 256 156 0 0 chr2 222943886 222943931 -30312652 + MADE1 DNA Mariner 1 45 -35 992 82 7 0 chr2 222945326 222945472 -30311111 + AluY SINE Alu 165 311 0 2541 55 0 3 chr2 222946121 222946428 -30310155 - AluY SINE Alu -5 306 1 442 262 24 43 chr2 222946985 222947149 -30309434 - MIR SINE MIR -45 217 57 1339 215 19 0 chr2 222947642 222947902 -30308681 + AluJo SINE Alu 1 265 -47 666 196 9 9 chr2 222947912 222948131 -30308452 + GA-rich Low_complexity Low_complexity 1 219 0 261 0 0 0 chr2 222948722 222948751 -30307832 + (TAGA)n Simple_repeat Simple_repeat 2 30 0 187 377 96 14 chr2 222950095 222950241 -30306342 - L2 LINE L2 -209 3063 2906 210 421 33 0 chr2 222950748 222950869 -30305714 - L2 LINE L2 -11 3261 3137 2994 111 65 43 chr2 222951753 222951927 -30304656 + MER1A DNA MER1_type 1 170 -2532 2209 82 22 57 chr2 222951927 222952244 -30304339 - AluSp SINE Alu -7 306 1 2994 111 65 43 chr2 222952244 222952581 -30304002 + MER1A DNA MER1_type 170 523 -6 396 355 48 30 chr2 222952687 222952918 -30303665 + MIR SINE MIR 22 256 -6 323 363 144 36 chr2 222953360 222953666 -30302917 + L2 LINE L2 2934 3272 0 7214 44 0 13 chr2 222956162 222957070 -30299513 - L1PA5 LINE L1 -2 6152 5257 1969 149 3 0 chr2 222957142 222957443 -30299140 + AluSx SINE Alu 1 302 -10 345 344 50 12 chr2 222957470 222957630 -30298953 - MIR SINE MIR 0 262 97 813 232 84 28 chr2 222958288 222958572 -30298011 - L1MC4a LINE L1 -1911 5897 5598 738 298 45 14 chr2 222958584 222958876 -30297707 - L1MC4a LINE L1 -2249 5559 5259 354 313 91 33 chr2 222958893 222959136 -30297447 - L1MC4a LINE L1 -906 5240 4984 615 324 61 17 chr2 222959288 222959761 -30296822 - L1MC4a LINE L1 -1857 4289 3796 338 233 12 23 chr2 222960160 222960246 -30296337 + MER112 DNA MER1_type 1 85 -175 842 196 12 17 chr2 222960310 222960483 -30296100 - FRAM SINE Alu -5 171 1 640 247 155 0 chr2 222960597 222960771 -30295812 + MIR SINE MIR 6 206 -56 2210 105 10 0 chr2 222962508 222962812 -30293771 + AluSc SINE Alu 1 307 -2 203 284 74 0 chr2 222964091 222964172 -30292411 + L2 LINE L2 2623 2709 -605 198 263 0 49 chr2 222964175 222964264 -30292319 + L2 LINE L2 2839 2912 -360 2130 171 11 13 chr2 222965309 222965684 -30290899 + MLT1C LTR MaLR 94 467 0 843 326 145 8 chr2 222965920 222966312 -30290271 + L3 LINE CR1 317 762 -815 345 47 0 0 chr2 222966595 222966638 -30289945 + (TG)n Simple_repeat Simple_repeat 2 44 0 243 58 58 43 chr2 222966650 222966719 -30289864 + (TTTA)n Simple_repeat Simple_repeat 3 72 0 1587 187 17 24 chr2 222966749 222967038 -30289545 - AluJo SINE Alu -25 287 1 602 308 122 61 chr2 222967858 222968436 -30288147 + L2 LINE L2 2702 3312 -1 28 71 0 0 chr2 222969973 222970029 -30286554 + AT_rich Low_complexity Low_complexity 1 56 0 194 276 161 23 chr2 222970048 222970135 -30286448 + MER5B DNA MER1_type 3 101 -77 459 283 137 26 chr2 222971225 222971532 -30285051 - L1ME4a LINE L1 -254 5867 5527 29 70 0 0 chr2 222971952 222972009 -30284574 + AT_rich Low_complexity Low_complexity 1 57 0 21 0 0 0 chr2 222972048 222972069 -30284514 + AT_rich Low_complexity Low_complexity 1 21 0 637 256 29 23 chr2 222972780 222972952 -30283631 - MER5B DNA MER1_type -3 175 3 444 272 158 11 chr2 222974425 222974609 -30281974 + MIR SINE MIR 52 262 0 316 222 421 5 chr2 222974838 222975054 -30281529 - MER5C DNA MER1_type -17 307 2 257 75 25 0 chr2 222975727 222975767 -30280816 + (GA)n Simple_repeat Simple_repeat 2 42 0 23 54 0 0 chr2 222976307 222976344 -30280239 + AT_rich Low_complexity Low_complexity 1 37 0 284 296 105 35 chr2 222977739 222977911 -30278672 - MIR SINE MIR -4 258 75 201 74 0 0 chr2 222978971 222978998 -30277585 + (A)n Simple_repeat Simple_repeat 1 27 0 1618 158 22 38 chr2 222981066 222981383 -30275200 + AluJo SINE Alu 1 312 0 30 0 0 0 chr2 222981617 222981647 -30274936 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr2 222983012 222983041 -30273542 + AT_rich Low_complexity Low_complexity 1 29 0 587 271 65 17 chr2 222983476 222983827 -30272756 - L1ME4a LINE L1 0 6121 5754 384 297 134 38 chr2 222984127 222984310 -30272273 - MIR SINE MIR -38 224 30 291 218 55 0 chr2 222984950 222985005 -30271578 + MIR SINE MIR 185 242 -20 1663 178 0 14 chr2 222985027 222985320 -30271263 + AluJb SINE Alu 5 293 -19 29 47 0 0 chr2 222985449 222985492 -30271091 + AT_rich Low_complexity Low_complexity 1 43 0 826 248 43 9 chr2 222985830 222986040 -30270543 - MIR SINE MIR 0 262 46 295 233 0 0 chr2 222986541 222986601 -30269982 - L1MD2 LINE L1 -233 6126 6067 369 380 79 40 chr2 222988664 222989093 -30267490 - L2 LINE L2 -2 3270 2825 1256 150 19 5 chr2 222989319 222989526 -30267057 - AluJb SINE Alu -17 295 86 979 56 0 0 chr2 222992056 222992182 -30264401 + L1PA5 LINE L1 6027 6152 -2 183 42 0 0 chr2 222992250 222992274 -30264309 + (GTTTG)n Simple_repeat Simple_repeat 3 26 0 664 298 62 14 chr2 222992526 222992734 -30263849 + L3 LINE CR1 1337 1554 -23 435 141 0 0 chr2 222992794 222992872 -30263711 + (CA)n Simple_repeat Simple_repeat 1 78 0 574 273 91 44 chr2 222993961 222994371 -30262212 + L1ME LINE L1 5374 5812 -309 21 57 0 0 chr2 222996509 222996544 -30260039 + AT_rich Low_complexity Low_complexity 1 35 0 454 276 55 25 chr2 222996839 222997002 -30259581 - MIR SINE MIR -31 231 64 198 328 0 15 chr2 222997039 222997106 -30259477 - MIR SINE MIR -184 78 13 1905 103 0 84 chr2 222997186 222997517 -30259066 - AluSx SINE Alu 0 305 1 1305 324 49 20 chr2 222997781 222998456 -30258127 - L2 LINE L2 -124 3189 2486 231 233 0 50 chr2 223000614 223000674 -30255909 - L2 LINE L2 -11 3302 3246 433 256 68 0 chr2 223000704 223000821 -30255762 - MIR SINE MIR -25 237 113 209 340 43 64 chr2 223000852 223000993 -30255590 - L2 LINE L2 -33 3239 3102 366 273 98 21 chr2 223001898 223002041 -30254542 - MIR SINE MIR -25 237 84 1591 128 128 4 chr2 223002136 223002387 -30254196 + AluSx SINE Alu 1 282 -30 293 0 0 26 chr2 223002391 223002429 -30254154 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 1465 187 42 35 chr2 223004091 223004401 -30252182 + AluJo SINE Alu 1 312 0 542 191 7 0 chr2 223004409 223004500 -30252083 + A-rich Low_complexity Low_complexity 4 93 -52 1730 83 19 19 chr2 223004500 223004764 -30251819 + AluSg SINE Alu 46 309 -1 2076 125 3 6 chr2 223004774 223005087 -30251496 + AluSx SINE Alu 1 312 0 542 191 7 0 chr2 223005087 223005125 -30251458 + A-rich Low_complexity Low_complexity 101 145 0 27 29 0 0 chr2 223005743 223005777 -30250806 + AT_rich Low_complexity Low_complexity 1 34 0 245 239 28 28 chr2 223007236 223007307 -30249276 - L2 LINE L2 -1 3271 3201 281 226 48 0 chr2 223008717 223008779 -30247804 + L2 LINE L2 3247 3311 -2 36 53 0 0 chr2 223009011 223009068 -30247515 + AT_rich Low_complexity Low_complexity 1 57 0 467 342 127 47 chr2 223009636 223010553 -30246030 + L2 LINE L2 2270 3271 -1 983 237 59 8 chr2 223011186 223011422 -30245161 - MIR SINE MIR -13 249 2 309 256 149 16 chr2 223011424 223011545 -30245038 + MIR SINE MIR 112 248 -14 218 308 13 26 chr2 223012690 223012768 -30243815 + MIR SINE MIR 97 173 -89 35 63 0 0 chr2 223013028 223013091 -30243492 + AT_rich Low_complexity Low_complexity 1 63 0 32 26 0 0 chr2 223013858 223013897 -30242686 + AT_rich Low_complexity Low_complexity 1 39 0 186 71 0 0 chr2 223017791 223017819 -30238764 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 210 267 0 0 chr2 223018776 223018821 -30237762 + A-rich Low_complexity Low_complexity 5 49 0 381 123 0 0 chr2 223019139 223019204 -30237379 + (TCC)n Simple_repeat Simple_repeat 1 65 0 256 23 0 47 chr2 223020403 223020446 -30236137 + (CGG)n Simple_repeat Simple_repeat 2 42 0 352 280 10 0 chr2 223020457 223020557 -30236026 + (CG)n Simple_repeat Simple_repeat 2 102 0 2044 110 3 17 chr2 223022903 223023202 -30233381 - AluSx SINE Alu -17 295 1 305 284 21 21 chr2 223023519 223023614 -30232969 + L2 LINE L2 3219 3313 0 60 53 0 0 chr2 223023819 223023914 -30232669 + AT_rich Low_complexity Low_complexity 1 95 0 197 261 0 113 chr2 223025158 223025273 -30231310 - L2 LINE L2 -1316 1998 1897 503 292 91 18 chr2 223026452 223026671 -30229912 - MIR SINE MIR -23 239 5 491 252 23 0 chr2 223029656 223029787 -30226796 - MER94 DNA DNA 0 134 1 2051 133 20 0 chr2 223029840 223030142 -30226441 - AluSx SINE Alu -4 308 1 474 281 83 25 chr2 223031570 223031812 -30224771 - MER112 DNA MER1_type 0 256 1 259 194 0 16 chr2 223031814 223031876 -30224707 + L1ME LINE L1 5756 5816 -346 244 147 0 44 chr2 223031883 223031951 -30224632 + (CATATA)n Simple_repeat Simple_repeat 6 70 0 447 308 8 23 chr2 223032181 223032330 -30224253 + MIR3 SINE MIR 18 164 -44 248 348 17 34 chr2 223032395 223032513 -30224070 - MIR3 SINE MIR -90 118 3 21 0 0 0 chr2 223033086 223033107 -30223476 + AT_rich Low_complexity Low_complexity 1 21 0 396 254 40 98 chr2 223033183 223033407 -30223176 + MIR SINE MIR 31 241 -21 1133 177 4 46 chr2 223033545 223033782 -30222801 - AluJo SINE Alu -2 310 84 29 28 0 0 chr2 223035158 223035194 -30221389 + AT_rich Low_complexity Low_complexity 1 36 0 26 0 0 0 chr2 223035778 223035804 -30220779 + AT_rich Low_complexity Low_complexity 1 26 0 1512 170 73 16 chr2 223037814 223038131 -30218452 + MER2 DNA MER2_type 1 335 -10 209 313 132 26 chr2 223038182 223038409 -30218174 - L2 LINE L2 -39 3274 3024 345 262 193 64 chr2 223038844 223039046 -30217537 - MLT1J2 LTR MaLR -199 251 24 3862 208 61 50 chr2 223039146 223039215 -30217368 + MER45B DNA AcHobo 42 109 -1472 2092 116 10 7 chr2 223039215 223039517 -30217066 - AluSx SINE Alu -9 303 1 3862 208 61 50 chr2 223039517 223039743 -30216840 + MER45B DNA AcHobo 109 331 -1250 1647 136 102 15 chr2 223039743 223040008 -30216575 + AluJb SINE Alu 8 295 -17 3862 208 61 50 chr2 223040008 223040698 -30215885 + MER45B DNA AcHobo 331 1039 -1 250 128 90 51 chr2 223041708 223041786 -30214797 - MLT1J2 LTR MaLR 0 450 370 1347 248 93 44 chr2 223041864 223041933 -30214650 - Charlie7 DNA MER1_type -298 2314 2250 1972 147 3 0 chr2 223041933 223042226 -30214357 + AluJb SINE Alu 1 294 -18 1347 248 93 44 chr2 223042226 223042790 -30213793 - Charlie7 DNA MER1_type -362 2250 1650 400 290 9 9 chr2 223042919 223043026 -30213557 - Charlie7 DNA MER1_type -2319 293 187 645 268 55 6 chr2 223043377 223043560 -30213023 - Charlie7 DNA MER1_type -2420 192 1 301 132 0 44 chr2 223044170 223044238 -30212345 - L1MD3 LINE L1 0 7995 7931 3020 130 63 24 chr2 223045032 223045178 -30211405 - MLT2B2 LTR ERVL -2 513 374 1466 179 133 0 chr2 223045178 223045480 -30211103 - MER2 DNA MER2_type -1 343 2 3020 130 63 24 chr2 223045480 223045827 -30210756 - MLT2B2 LTR ERVL -141 374 1 190 315 9 65 chr2 223046431 223046539 -30210044 + MIR SINE MIR 31 132 -130 270 304 41 35 chr2 223048701 223048872 -30207711 + MLT1K LTR MaLR 369 540 -48 28 29 0 0 chr2 223048915 223048950 -30207633 + AT_rich Low_complexity Low_complexity 1 35 0 278 323 63 24 chr2 223049015 223049142 -30207441 + L2 LINE L2 3141 3272 0 2233 116 0 0 chr2 223049339 223049649 -30206934 + AluSg SINE Alu 1 310 0 577 268 37 11 chr2 223049737 223049927 -30206656 + MIR SINE MIR 68 262 0 863 205 57 104 chr2 223050089 223050425 -30206158 - L1MD2 LINE L1 -2 6357 6038 34 65 0 0 chr2 223050930 223050992 -30205591 + AT_rich Low_complexity Low_complexity 1 62 0 542 318 12 6 chr2 223051622 223051792 -30204791 + MIR SINE MIR 92 262 0 447 380 151 15 chr2 223052487 223053174 -30203409 + L2 LINE L2 2041 2821 -493 417 39 0 0 chr2 223053250 223053301 -30203282 + (TCCA)n Simple_repeat Simple_repeat 4 54 0 546 229 83 13 chr2 223053303 223053460 -30203123 - L2 LINE L2 -24 3289 3122 992 280 133 30 chr2 223053632 223054129 -30202454 - L2 LINE L2 -604 2710 2163 254 135 39 0 chr2 223054179 223054231 -30202352 + (CATA)n Simple_repeat Simple_repeat 2 55 0 661 91 0 10 chr2 223055826 223055925 -30200658 - L1MA2 LINE L1 0 6304 6207 702 253 65 35 chr2 223057276 223057505 -30199078 + MIR SINE MIR 21 256 -6 596 281 92 66 chr2 223058758 223059064 -30197519 + L1ME LINE L1 4415 4743 -1403 2699 33 0 0 chr2 223059064 223059371 -30197212 - AluY SINE Alu -4 307 1 596 281 92 66 chr2 223059371 223059608 -30196975 + L1ME LINE L1 4743 4972 -1174 1455 152 28 59 chr2 223059630 223059920 -30196663 + AluJo SINE Alu 1 281 -31 2751 16 0 10 chr2 223059920 223060229 -30196354 - AluYb8 SINE Alu -11 307 1 213 39 0 0 chr2 223060248 223060274 -30196309 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1404 159 145 37 chr2 223060356 223060708 -30195875 - MLT1B LTR MaLR 0 390 1 251 310 101 53 chr2 223060848 223061225 -30195358 + L1ME LINE L1 5500 5894 -227 21 0 0 0 chr2 223061965 223061986 -30194597 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr2 223062758 223062789 -30193794 + AT_rich Low_complexity Low_complexity 1 31 0 228 247 13 0 chr2 223063145 223063222 -30193361 + (TA)n Simple_repeat Simple_repeat 2 79 0 287 209 9 0 chr2 223063279 223063394 -30193189 + (TA)n Simple_repeat Simple_repeat 2 117 0 726 191 0 0 chr2 223063396 223063511 -30193072 - FLAM_A SINE Alu -18 115 1 1624 165 74 3 chr2 223064337 223064622 -30191961 - AluJb SINE Alu -7 305 1 193 302 116 54 chr2 223064752 223064994 -30191589 - L2 LINE L2 -212 3060 2804 588 238 76 68 chr2 223065707 223066094 -30190489 + L1ME LINE L1 5257 5658 -463 345 375 62 7 chr2 223066114 223066389 -30190194 - LTR16C LTR ERVL -2 489 200 646 274 77 10 chr2 223066940 223067211 -30189372 - ERVL LTR ERVL -1316 4338 4080 590 296 10 39 chr2 223067634 223067751 -30188832 - ERVL LTR ERVL -2080 2916 2806 2411 15 0 0 chr2 223067751 223068020 -30188563 - AluY SINE Alu -4 307 39 590 296 10 39 chr2 223068020 223068108 -30188475 - ERVL LTR ERVL -2190 2806 2717 572 283 96 0 chr2 223068113 223068290 -30188293 - MLT1G1 LTR MaLR -394 201 8 547 351 78 41 chr2 223068830 223069442 -30187141 - ERVL LTR ERVL -4359 637 3 231 287 66 56 chr2 223069873 223070071 -30186512 + L1ME LINE L1 5731 5933 -188 214 209 45 0 chr2 223070272 223070339 -30186244 + CT-rich Low_complexity Low_complexity 3 72 0 407 318 26 39 chr2 223070459 223070613 -30185970 - L3 LINE CR1 -1 1576 1425 795 267 95 13 chr2 223070695 223070927 -30185656 - MIR SINE MIR 0 262 12 22 0 0 0 chr2 223071949 223071971 -30184612 + AT_rich Low_complexity Low_complexity 1 22 0 194 362 60 44 chr2 223072051 223072369 -30184214 + L2 LINE L2 2177 2499 -815 255 133 0 0 chr2 223072699 223072744 -30183839 + (GAAAA)n Simple_repeat Simple_repeat 2 46 0 344 287 49 81 chr2 223073488 223073852 -30182731 - ERVL LTR ERVL -4242 1522 1127 445 316 20 9 chr2 223074055 223074233 -30182350 - ERVL LTR ERVL -4737 956 736 331 305 21 28 chr2 223074733 223074874 -30181709 + MLT1I LTR MaLR 1 140 -269 2327 102 47 8 chr2 223075762 223076123 -30180460 + THE1C LTR MaLR 1 375 0 280 265 28 76 chr2 223076340 223076551 -30180032 + L1M4 LINE L1 2210 2410 -3736 2599 140 15 0 chr2 223076565 223076965 -30179618 - MER57B LTR ERV1 -28 406 1 1632 80 117 13 chr2 223076965 223077204 -30179379 - MER57B-int LTR ERV1 0 7537 7274 666 161 16 8 chr2 223077204 223077328 -30179255 - LTR54B LTR ERV1 -369 129 5 11694 110 39 36 chr2 223077328 223078132 -30178451 - MER57B-int LTR ERV1 -385 7152 6352 2183 121 0 3 chr2 223078132 223078429 -30178154 + AluSc SINE Alu 1 296 -13 369 0 0 0 chr2 223078431 223078472 -30178111 + (TA)n Simple_repeat Simple_repeat 1 41 0 11694 110 39 36 chr2 223078472 223079505 -30177078 - MER57B-int LTR ERV1 -1185 6352 5307 5929 197 85 27 chr2 223079508 223082133 -30174450 - MER57B-int LTR ERV1 -2231 2649 1554 3505 139 63 0 chr2 223082100 223082659 -30173924 - MER57B-int LTR ERV1 -5063 883 290 * 4187 147 23 3 chr2 223082656 223083317 -30173266 - MER57B-int LTR ERV1 -6863 674 1 530 45 216 0 chr2 223083329 223083417 -30173166 - MER57B LTR ERV1 -4 430 324 306 313 115 29 chr2 223083533 223084253 -30172330 + L1M4 LINE L1 2532 3313 -2833 278 98 0 131 chr2 223084565 223084626 -30171957 + MLT1A2 LTR MaLR 1 53 -321 967 269 31 64 chr2 223085873 223086357 -30170226 - MER34 LTR ERV1 -65 477 10 244 278 133 0 chr2 223086360 223086450 -30170133 - MIR SINE MIR -56 206 105 1358 281 62 64 chr2 223086483 223087032 -30169551 + L1M4b LINE L1 49 596 -6263 954 221 24 12 chr2 223087072 223087321 -30169262 + L1M4b LINE L1 3015 3266 -3691 230 191 95 24 chr2 223087346 223087430 -30169153 + L1MC4 LINE L1 6614 6703 -1339 573 193 57 7 chr2 223087441 223087581 -30169002 + L1M4b LINE L1 3253 3399 -3558 1069 131 49 193 chr2 223087612 223088062 -30168521 + L1MB7 LINE L1 5800 6184 0 251 336 17 26 chr2 223088077 223088193 -30168390 - MIR SINE MIR -134 128 14 1120 209 17 17 chr2 223088923 223089162 -30167421 + MER8 DNA MER2_type 1 239 0 572 225 62 0 chr2 223089440 223089569 -30167014 - MER63A DNA MER1_type 0 210 74 252 200 0 0 chr2 223089832 223089877 -30166706 - MER5A DNA MER1_type -138 51 7 339 151 0 0 chr2 223089879 223089932 -30166651 + MLT1J LTR MaLR 457 509 -2 567 341 52 37 chr2 223090344 223090751 -30165832 + LTR16C LTR ERVL 79 491 0 236 276 92 0 chr2 223090898 223090974 -30165609 - L2 LINE L2 -991 2323 2241 21 0 0 0 chr2 223091465 223091486 -30165097 + AT_rich Low_complexity Low_complexity 1 21 0 1847 81 7 85 chr2 223092104 223092399 -30164184 - AluY SINE Alu -3 308 37 264 30 0 0 chr2 223093322 223093355 -30163228 + (CA)n Simple_repeat Simple_repeat 2 34 0 329 330 17 8 chr2 223094390 223094508 -30162075 + MIR3 SINE MIR 76 194 -14 834 249 69 4 chr2 223094944 223095189 -30161394 + MIR SINE MIR 2 262 0 346 218 165 0 chr2 223096499 223096632 -30159951 - MER5C DNA MER1_type -2 322 168 207 0 0 0 chr2 223096941 223096964 -30159619 + (TG)n Simple_repeat Simple_repeat 2 24 0 568 118 140 0 chr2 223097009 223097102 -30159481 - AluSg/x SINE Alu -12 297 192 329 326 73 32 chr2 223097772 223097990 -30158593 + MIR SINE MIR 2 228 -34 568 276 43 51 chr2 223098231 223098485 -30158098 - MIR SINE MIR -8 254 3 547 161 0 0 chr2 223098534 223098615 -30157968 - Tigger7 DNA MER2_type 0 2487 2407 * 1369 231 46 0 chr2 223098608 223098889 -30157694 - Tigger7 DNA MER2_type -2193 294 1 273 287 115 0 chr2 223099076 223099163 -30157420 + MIR SINE MIR 117 213 -49 247 271 8 139 chr2 223099170 223099292 -30157291 - MIR SINE MIR -155 107 2 375 177 0 0 chr2 223099335 223099397 -30157186 - Tigger7 DNA MER2_type 0 2487 2426 28 79 0 0 chr2 223100030 223100093 -30156490 + AT_rich Low_complexity Low_complexity 1 63 0 289 206 62 151 chr2 223100422 223100568 -30156015 - MER5B DNA MER1_type -23 155 23 222 150 0 0 chr2 223101516 223101556 -30155027 + (CA)n Simple_repeat Simple_repeat 2 41 0 206 317 67 10 chr2 223103279 223103383 -30153200 + MIR SINE MIR 82 191 -71 204 226 36 12 chr2 223104168 223104252 -30152331 + (TTATA)n Simple_repeat Simple_repeat 5 90 0 24 0 0 0 chr2 223104461 223104485 -30152098 + AT_rich Low_complexity Low_complexity 1 24 0 243 125 0 0 chr2 223104543 223104583 -30152000 + (T)n Simple_repeat Simple_repeat 1 40 0 22 70 0 0 chr2 223106993 223107036 -30149547 + AT_rich Low_complexity Low_complexity 1 43 0 34 0 0 0 chr2 223107148 223107182 -30149401 + AT_rich Low_complexity Low_complexity 1 34 0 2114 106 7 0 chr2 223108561 223108868 -30147715 + AluSq SINE Alu 1 309 0 221 220 20 0 chr2 223109069 223109119 -30147464 + (TA)n Simple_repeat Simple_repeat 1 51 0 269 375 19 10 chr2 223111104 223111208 -30145375 - MIR SINE MIR -80 128 24 22 0 0 0 chr2 223111759 223111781 -30144802 + AT_rich Low_complexity Low_complexity 1 22 0 454 257 151 7 chr2 223112490 223112642 -30143941 + MER5A DNA MER1_type 9 182 -7 21 57 0 0 chr2 223112885 223112920 -30143663 + AT_rich Low_complexity Low_complexity 1 35 0 392 206 65 37 chr2 223113059 223113166 -30143417 + L1ME3A LINE L1 6037 6146 -24 608 244 81 84 chr2 223113432 223113777 -30142806 + MARNA DNA Mariner 223 566 -20 2142 70 0 11 chr2 223114499 223114769 -30141814 + AluY SINE Alu 1 267 -44 330 299 62 62 chr2 223115026 223115203 -30141380 - MER5B DNA MER1_type 0 178 2 185 318 118 9 chr2 223116186 223116296 -30140287 - L2 LINE L2 -5 3308 3187 2340 115 0 0 chr2 223116699 223117011 -30139572 - AluSx SINE Alu 0 312 1 2288 99 0 0 chr2 223117805 223118109 -30138474 + AluY SINE Alu 1 304 -7 335 226 161 77 chr2 223119156 223119311 -30137272 + MIR SINE MIR 94 261 -1 21 57 0 0 chr2 223120293 223120328 -30136255 + AT_rich Low_complexity Low_complexity 1 35 0 231 36 0 0 chr2 223122889 223122917 -30133666 + (CAAAG)n Simple_repeat Simple_repeat 2 29 0 2168 105 7 3 chr2 223123077 223123382 -30133201 - AluSc SINE Alu -3 306 1 877 233 62 19 chr2 223123798 223124008 -30132575 - MER20 DNA MER1_type 0 219 1 627 227 104 24 chr2 223124065 223124316 -30132267 - MER69 DNA AcHobo -7 2519 2249 1155 253 10 26 chr2 223124442 223124750 -30131833 - MER69 DNA AcHobo -534 692 390 490 304 56 14 chr2 223124747 223124961 -30131622 - MER69 DNA AcHobo -971 255 33 * 7043 48 12 0 chr2 223125274 223126339 -30130244 + L1PA7 LINE L1 5077 6152 -2 265 293 40 0 chr2 223126510 223126585 -30129998 + MIR SINE MIR 95 172 -90 248 250 0 0 chr2 223126787 223126835 -30129748 + 5S rRNA rRNA 1 48 -73 319 200 116 32 chr2 223126841 223126936 -30129647 + MIR SINE MIR 71 173 -89 2117 145 36 12 chr2 223128011 223128426 -30128157 - L1MA9 LINE L1 0 6312 5888 602 153 59 0 chr2 223128428 223128546 -30128037 - L1MA9 LINE L1 -625 5558 5434 1773 103 76 66 chr2 223128895 223129196 -30127387 + AluSg SINE Alu 6 309 -1 2263 101 0 0 chr2 223129364 223129662 -30126921 + AluY SINE Alu 1 298 -13 247 185 84 109 chr2 223130572 223130691 -30125892 + MLT1H LTR MaLR 432 547 -2 582 238 73 133 chr2 223131015 223131264 -30125319 + MER110 LTR ERV1 196 424 -67 2083 123 3 7 chr2 223131264 223131564 -30125019 + AluSg SINE Alu 1 299 -11 582 238 73 133 chr2 223131564 223131629 -30124954 + MER110 LTR ERV1 424 491 0 264 267 53 0 chr2 223131766 223131841 -30124742 + MIR3 SINE MIR 130 208 0 22 35 0 0 chr2 223131926 223131955 -30124628 + AT_rich Low_complexity Low_complexity 1 29 0 22 56 0 0 chr2 223133423 223133459 -30123124 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr2 223133586 223133607 -30122976 + AT_rich Low_complexity Low_complexity 1 21 0 2060 99 3 3 chr2 223133813 223134124 -30122459 - AluSx SINE Alu 0 311 1 1134 256 59 25 chr2 223134146 223134502 -30122081 + MER87 LTR ERV1 174 541 0 355 328 49 16 chr2 223134508 223134630 -30121953 + MER87-int LTR ERV1 5 130 -1656 * 1798 117 40 3 chr2 223134627 223134926 -30121657 - MER87-int LTR ERV1 -672 1114 805 1199 261 55 28 chr2 223135078 223135442 -30121141 - MER87-int LTR ERV1 -1408 378 5 1201 259 68 14 chr2 223135448 223135803 -30120780 - MER87 LTR ERV1 0 541 168 2444 68 3 0 chr2 223135911 223136204 -30120379 - AluSp SINE Alu -19 294 1 46 45 0 0 chr2 223136418 223136485 -30120098 + AT_rich Low_complexity Low_complexity 1 67 0 349 212 0 0 chr2 223136844 223136910 -30119673 - MER5A DNA MER1_type -118 71 6 443 351 91 33 chr2 223137942 223138679 -30117904 + L1MC4a LINE L1 4457 5233 -913 2090 113 7 3 chr2 223138743 223139034 -30117549 + AluSg SINE Alu 1 292 -18 347 331 168 36 chr2 223139229 223139782 -30116801 + L1MC4a LINE L1 5303 5928 -1880 1014 238 40 67 chr2 223139849 223140177 -30116406 - LTR40b LTR ERVL -8 454 136 180 152 0 0 chr2 223140515 223140548 -30116035 + (TA)n Simple_repeat Simple_repeat 1 33 0 2166 108 7 3 chr2 223141378 223141684 -30114899 + AluSg SINE Alu 4 310 0 1394 193 0 90 chr2 223143391 223143712 -30112871 + AluJo SINE Alu 1 292 -20 225 94 0 0 chr2 223144030 223144062 -30112521 + (TTCC)n Simple_repeat Simple_repeat 4 35 0 372 99 176 77 chr2 223144392 223144483 -30112100 - L1MD3 LINE L1 0 7995 7896 1432 94 0 0 chr2 223144527 223144728 -30111855 + L1PA13 LINE L1 5777 5977 -186 471 132 13 0 chr2 223145002 223145078 -30111505 - L1MB1 LINE L1 -20 6169 6093 351 192 67 19 chr2 223145176 223145280 -30111303 - MLT1K LTR MaLR -10 578 470 5063 178 68 22 chr2 223145309 223145619 -30110964 - L1MC3 LINE L1 -2 7783 7489 2243 126 16 16 chr2 223145619 223145983 -30110600 + THE1B LTR MaLR 1 364 0 11744 91 4 1 chr2 223145983 223147559 -30109024 + THE1B-int LTR MaLR 1 1580 0 2130 141 19 16 chr2 223147559 223147922 -30108661 + THE1B LTR MaLR 1 364 0 5063 178 68 22 chr2 223147922 223148710 -30107873 - L1MC3 LINE L1 -295 7490 6632 2257 103 0 6 chr2 223150330 223150641 -30105942 - AluSc SINE Alu 0 309 1 506 257 140 6 chr2 223150764 223150935 -30105648 - MIR SINE MIR -2 260 67 1020 236 67 0 chr2 223151037 223151245 -30105338 + LTR40c LTR ERVL 4 225 -240 722 302 41 12 chr2 223151430 223151672 -30104911 - MIR SINE MIR 0 262 14 3195 119 55 6 chr2 223151768 223152296 -30104287 + L1PA13 LINE L1 5610 6163 0 403 295 149 75 chr2 223152964 223153428 -30103155 - L1M2 LINE L1 -5924 925 428 1621 182 0 40 chr2 223156585 223156887 -30099696 - AluJo SINE Alu -22 290 1 2301 90 0 23 chr2 223156967 223157277 -30099306 - AluY SINE Alu -5 306 4 432 281 178 0 chr2 223157717 223157863 -30098720 - MER5A DNA MER1_type -9 180 9 332 299 17 0 chr2 223158069 223158186 -30098397 + MER117 DNA MER1_type 1 119 -78 23 0 0 0 chr2 223160075 223160098 -30096485 + AT_rich Low_complexity Low_complexity 1 23 0 375 237 46 72 chr2 223160442 223160594 -30095989 + MIR SINE MIR 65 212 -50 2832 13 0 0 chr2 223161052 223161363 -30095220 + AluYa5 SINE Alu 1 311 0 322 241 23 23 chr2 223161516 223161603 -30094980 - MIR SINE MIR 0 262 176 1641 266 53 30 chr2 223161611 223161642 -30094941 + MLT1F LTR MaLR 4 33 -509 1828 125 72 31 chr2 223161642 223162001 -30094582 + THE1C LTR MaLR 1 374 -1 1641 266 53 30 chr2 223162001 223162443 -30094140 + MLT1F LTR MaLR 33 488 -54 2049 161 42 26 chr2 223162445 223162898 -30093685 - L1MA9 LINE L1 -1 6311 5852 506 257 61 0 chr2 223163554 223163702 -30092881 + MIR SINE MIR 106 262 0 192 77 0 0 chr2 223163907 223163933 -30092650 + (CAA)n Simple_repeat Simple_repeat 2 27 0 25 31 0 0 chr2 223164588 223164620 -30091963 + AT_rich Low_complexity Low_complexity 1 32 0 298 323 121 0 chr2 223165366 223165490 -30091093 + MIR SINE MIR 124 262 0 21 36 0 0 chr2 223166577 223166605 -30089978 + AT_rich Low_complexity Low_complexity 1 28 0 285 242 0 0 chr2 223167177 223167239 -30089344 + L2 LINE L2 3252 3313 0 1846 87 116 25 chr2 223167971 223168246 -30088337 - AluY SINE Alu -11 300 1 297 219 0 0 chr2 223168889 223168962 -30087621 + CT-rich Low_complexity Low_complexity 3 75 0 258 241 17 17 chr2 223169067 223169125 -30087458 + Charlie1 DNA MER1_type 1 58 -2703 1431 220 58 18 chr2 223169136 223169532 -30087051 + Charlie1 DNA MER1_type 2343 2754 -7 516 103 13 0 chr2 223169687 223169765 -30086818 + MADE1 DNA Mariner 1 79 -1 326 300 82 9 chr2 223171127 223171237 -30085346 + L2 LINE L2 3151 3268 -4 347 0 23 0 chr2 223171290 223171333 -30085250 + (TG)n Simple_repeat Simple_repeat 2 45 0 2638 194 61 20 chr2 223172086 223172770 -30083813 - L1 LINE L1 -2323 5242 4531 * 3951 164 50 6 chr2 223172755 223173438 -30083145 - L1 LINE L1 -6840 725 13 314 350 119 0 chr2 223173636 223173779 -30082804 - LTR67 LTR ERVL -279 278 119 22 35 0 0 chr2 223174462 223174491 -30082092 + AT_rich Low_complexity Low_complexity 1 29 0 1031 209 15 68 chr2 223174783 223175087 -30081496 + L1MC4a LINE L1 6605 6835 -973 1456 218 55 17 chr2 223175150 223175220 -30081363 - LTR52 LTR ERVL -3 418 352 360 0 0 0 chr2 223175220 223175260 -30081323 + (CA)n Simple_repeat Simple_repeat 1 40 0 1456 218 55 17 chr2 223175260 223175592 -30080991 - LTR52 LTR ERVL -69 352 1 25000 112 40 11 chr2 223175710 223179596 -30076987 - L1P LINE L1 -2136 4010 11 2316 183 20 0 chr2 223179775 223180229 -30076354 + L1MB1 LINE L1 5699 6161 -7 22 0 0 0 chr2 223180350 223180372 -30076211 + AT_rich Low_complexity Low_complexity 1 22 0 2298 251 73 15 chr2 223180386 223181615 -30074968 - L1ME2 LINE L1 -16 6148 4846 216 0 0 0 chr2 223181713 223181737 -30074846 + (TG)n Simple_repeat Simple_repeat 1 24 0 22 35 0 0 chr2 223181818 223181847 -30074736 + AT_rich Low_complexity Low_complexity 1 29 0 280 290 90 0 chr2 223181906 223182006 -30074577 + L2 LINE L2 3151 3259 -13 256 242 137 62 chr2 223183986 223184147 -30072436 - MIR SINE MIR -10 252 80 366 265 44 29 chr2 223184680 223184816 -30071767 - L1MCc LINE L1 -5505 918 781 2112 91 77 40 chr2 223184904 223185255 -30071328 + THE1B LTR MaLR 1 364 0 9793 79 3 154 chr2 223185255 223187111 -30069472 + THE1B-int LTR MaLR 1 1577 -3 1910 104 107 33 chr2 223187113 223187450 -30069133 + THE1B LTR MaLR 3 364 0 742 165 0 0 chr2 223187592 223187707 -30068876 + L1MA2 LINE L1 786 900 -6665 11685 172 38 7 chr2 223187712 223191457 -30065126 + L1MA2 LINE L1 3806 7719 -4 23 33 0 0 chr2 223191457 223191487 -30065096 + AT_rich Low_complexity Low_complexity 1 30 0 6207 227 30 47 chr2 223192277 223194867 -30061716 + L1P3 LINE L1 10 2583 -3878 3911 83 4 11 chr2 223194867 223195412 -30061171 + L1PA10 LINE L1 5628 6168 0 6207 227 30 47 chr2 223195412 223195440 -30061143 + L1P3 LINE L1 2583 2610 -3851 5766 12 30 0 chr2 223195699 223196365 -30060218 - L1PA3 LINE L1 -4 6151 5466 24 0 0 0 chr2 223196627 223196651 -30059932 + AT_rich Low_complexity Low_complexity 1 24 0 269 122 0 0 chr2 223196651 223196692 -30059891 - LTR54 LTR ERV1 -68 442 402 547 141 8 74 chr2 223196861 223196982 -30059601 - MER46B DNA MER2_type 0 236 124 * 2132 185 37 48 chr2 223196959 223197419 -30059164 - LTR24 LTR ERV1 -12 455 1 1393 134 106 14 chr2 223197419 223197673 -30058910 - MER46B DNA MER2_type -82 154 1 641 215 13 34 chr2 223197673 223197822 -30058761 - MER58A DNA MER1_type -42 182 37 620 296 81 74 chr2 223198029 223198461 -30058122 + L2 LINE L2 2879 3313 0 495 0 0 0 chr2 223198810 223198865 -30057718 + (CA)n Simple_repeat Simple_repeat 2 56 0 31 0 0 0 chr2 223199701 223199732 -30056851 + AT_rich Low_complexity Low_complexity 1 31 0 25 31 0 0 chr2 223200267 223200299 -30056284 + AT_rich Low_complexity Low_complexity 1 32 0 903 226 4 62 chr2 223200487 223200713 -30055870 + MER58A DNA MER1_type 4 216 -8 31 44 0 0 chr2 223201187 223201232 -30055351 + AT_rich Low_complexity Low_complexity 1 45 0 29 60 0 0 chr2 223201753 223201803 -30054780 + AT_rich Low_complexity Low_complexity 1 50 0 491 263 58 73 chr2 223201893 223202098 -30054485 - MIR SINE MIR -60 202 1 3438 286 102 33 chr2 223203728 223205506 -30051077 + L2 LINE L2 1378 3298 -15 1249 120 35 5 chr2 223206240 223206440 -30050143 + L1MC1 LINE L1 6128 6333 0 1091 117 6 0 chr2 223206448 223206611 -30049972 - L1PB4 LINE L1 -570 5586 5423 2760 164 65 0 chr2 223206611 223207115 -30049468 + L1PB4 LINE L1 5617 6155 -1 350 303 50 14 chr2 223207119 223207337 -30049246 - L1ME4a LINE L1 -69 6052 5827 25 31 0 0 chr2 223207602 223207634 -30048949 + AT_rich Low_complexity Low_complexity 1 32 0 249 118 0 132 chr2 223208674 223208750 -30047833 - L1MA4 LINE L1 -5 6295 6230 3270 127 24 38 chr2 223208760 223209342 -30047241 - L1MA4 LINE L1 -26 6274 5701 245 307 179 38 chr2 223209757 223209969 -30046614 + MIR SINE MIR 20 261 -1 602 88 59 10 chr2 223210452 223210580 -30046003 + L1PA3 LINE L1 6049 6155 0 228 35 0 0 chr2 223210802 223210831 -30045752 + (A)n Simple_repeat Simple_repeat 1 29 0 501 313 75 7 chr2 223211153 223211434 -30045149 - L2 LINE L2 -163 3150 2851 1659 168 8 72 chr2 223211503 223211627 -30044956 + L1M3 LINE L1 5374 5504 -664 2246 78 10 3 chr2 223211627 223211923 -30044660 + AluY SINE Alu 2 299 -12 1659 168 8 72 chr2 223211923 223212161 -30044422 + L1M3 LINE L1 5504 5713 -455 4814 45 3 2 chr2 223212261 223212859 -30043724 + L1P LINE L1 3978 4576 -1570 669 325 52 15 chr2 223212865 223213271 -30043312 + L1MEc LINE L1 1496 1916 -4480 456 186 6 3 chr2 223213290 223213392 -30043191 + L1ME1 LINE L1 6030 6133 -29 1783 152 19 61 chr2 223213567 223213930 -30042653 - L1MC1 LINE L1 0 6333 5986 2094 113 30 0 chr2 223214986 223215286 -30041297 + AluSc SINE Alu 1 309 0 189 107 0 0 chr2 223215418 223215446 -30041137 + (TCCA)n Simple_repeat Simple_repeat 4 31 0 266 321 67 12 chr2 223216480 223216645 -30039938 - L1MEd LINE L1 -4972 1147 974 256 108 0 0 chr2 223216680 223216717 -30039866 + L2 LINE L2 3269 3305 -8 206 313 35 83 chr2 223217588 223217732 -30038851 + MIR SINE MIR 126 262 0 37 39 0 0 chr2 223218463 223218514 -30038069 + AT_rich Low_complexity Low_complexity 1 51 0 27 29 0 0 chr2 223219629 223219663 -30036920 + AT_rich Low_complexity Low_complexity 1 34 0 61 45 0 0 chr2 223219779 223219868 -30036715 + AT_rich Low_complexity Low_complexity 1 89 0 22 35 0 0 chr2 223219886 223219915 -30036668 + AT_rich Low_complexity Low_complexity 1 29 0 225 188 16 16 chr2 223220544 223220608 -30035975 - HAL1b LINE L1 -540 808 745 527 278 66 15 chr2 223220829 223221088 -30035495 - HAL1 LINE L1 -738 1769 1498 3204 79 49 13 chr2 223221696 223221736 -30034847 - MLT2A1 LTR ERVL 0 515 478 210 71 0 0 chr2 223221736 223221764 -30034819 + (TA)n Simple_repeat Simple_repeat 2 29 0 3204 79 49 13 chr2 223221764 223222194 -30034389 - MLT2A1 LTR ERVL -37 478 1 18663 76 6 2 chr2 223222194 223224849 -30031734 - HERVL-A1 LTR ERVL 0 5654 2939 621 361 77 7 chr2 223224847 223225146 -30031437 - HERVL-A1 LTR ERVL -3559 2205 1886 * 5265 124 38 5 chr2 223225556 223226419 -30030164 - L1MA3 LINE L1 0 6305 5414 5031 177 31 8 chr2 223226544 223227565 -30029018 - L1MA3 LINE L1 -1097 5049 4005 237 353 25 34 chr2 223228843 223228962 -30027621 - L2 LINE L2 -251 3021 2904 465 205 0 0 chr2 223229282 223229360 -30027223 + MER3 DNA MER1_type 1 78 -131 1391 199 3 34 chr2 223229908 223230230 -30026353 - AluJo SINE Alu 0 312 1 302 191 83 12 chr2 223230655 223230739 -30025844 + L1MC4 LINE L1 6614 6703 -1339 238 50 50 0 chr2 223230740 223230780 -30025803 + (TA)n Simple_repeat Simple_repeat 1 42 0 1002 293 69 47 chr2 223231154 223232229 -30024354 + L1MEc LINE L1 107 1167 -5051 509 328 25 15 chr2 223232343 223232541 -30024042 - HERV16 LTR ERVL -2841 2155 1956 30288 38 3 1 chr2 223232769 223237297 -30019286 - L1PA4 LINE L1 0 6155 1622 1570 223 110 4 chr2 223237309 223237820 -30018763 + L1MEc LINE L1 2759 3323 -2892 261 316 0 11 chr2 223237807 223237902 -30018681 + L1ME2 LINE L1 5460 5553 -611 * 1149 236 6 33 chr2 223237903 223238234 -30018349 + L1ME2 LINE L1 5617 5938 -226 418 234 65 8 chr2 223238235 223238359 -30018224 + L1ME2 LINE L1 6025 6155 -9 1775 122 3 74 chr2 223239232 223239543 -30017040 + AluSx SINE Alu 1 289 -23 325 335 26 47 chr2 223239608 223239799 -30016784 + MIR SINE MIR 20 206 -56 1482 122 76 127 chr2 223240255 223240650 -30015933 + THE1C LTR MaLR 1 375 0 283 318 28 0 chr2 223242156 223242263 -30014320 - MER94 DNA DNA -1 133 24 10365 69 17 3 chr2 223242289 223244438 -30012145 - L1PA6 LINE L1 -9 6145 3973 293 217 0 14 chr2 223244637 223244706 -30011877 + MLT1F1 LTR MaLR 33 100 -467 1192 235 38 22 chr2 223244706 223245021 -30011562 + L1MC3 LINE L1 7157 7476 -309 920 90 0 0 chr2 223245021 223245143 -30011440 - MSTB1 LTR MaLR 0 432 311 776 110 0 0 chr2 223245144 223245253 -30011330 - MSTB LTR MaLR -317 109 1 1354 196 26 3 chr2 223245253 223245559 -30011024 + L1MC3 LINE L1 7472 7784 -1 25 65 0 0 chr2 223245644 223245690 -30010893 + AT_rich Low_complexity Low_complexity 1 46 0 30 100 0 0 chr2 223246165 223246265 -30010318 + AT_rich Low_complexity Low_complexity 1 100 0 21 0 0 0 chr2 223246536 223246557 -30010026 + AT_rich Low_complexity Low_complexity 1 21 0 294 312 79 61 chr2 223246619 223247013 -30009570 + L1MEc LINE L1 456 856 -5969 779 287 65 45 chr2 223247377 223247738 -30008845 + L1MEc LINE L1 1014 1366 -5176 2060 120 3 0 chr2 223247738 223248029 -30008554 - AluSx SINE Alu -16 296 5 779 287 65 45 chr2 223248029 223248136 -30008447 + L1MEc LINE L1 1366 1469 -5073 2607 30 7 0 chr2 223248136 223248440 -30008143 + AluYa5 SINE Alu 1 306 -5 779 287 65 45 chr2 223248440 223248655 -30007928 + L1MEc LINE L1 1469 1710 -4832 2243 81 6 25 chr2 223248680 223249001 -30007582 - THE1B LTR MaLR -49 315 1 397 133 0 0 chr2 223249001 223249061 -30007522 + L1M3 LINE L1 5741 5800 -371 7225 48 4 4 chr2 223249062 223250045 -30006538 - L1PA5 LINE L1 -2 6152 5169 774 325 77 29 chr2 223250198 223250650 -30005933 - ERVL LTR ERVL -2092 3562 3089 635 334 73 2 chr2 223250750 223251112 -30005471 - ERVL LTR ERVL -2141 2855 2499 2850 301 78 24 chr2 223251829 223253857 -30002726 - ERVL LTR ERVL -2227 2769 559 225 0 0 0 chr2 223253861 223253886 -30002697 + (CA)n Simple_repeat Simple_repeat 1 25 0 23 68 0 0 chr2 223254011 223254055 -30002528 + AT_rich Low_complexity Low_complexity 1 44 0 21 36 0 0 chr2 223255280 223255308 -30001275 + AT_rich Low_complexity Low_complexity 1 28 0 2688 12 0 37 chr2 223255500 223255822 -30000761 - AluYa5 SINE Alu -1 310 1 3681 172 41 31 chr2 223255978 223256727 -29999856 + L1MB3 LINE L1 15 771 -5613 * 4044 204 72 7 chr2 223256710 223258441 -29998142 + L1MB3 LINE L1 4528 6372 -47 23 68 0 0 chr2 223258850 223258894 -29997689 + AT_rich Low_complexity Low_complexity 1 44 0 2313 100 0 0 chr2 223259055 223259354 -29997229 + AluSg SINE Alu 1 299 -11 461 305 76 25 chr2 223259492 223259689 -29996894 + MIR SINE MIR 18 224 -38 2196 91 3 14 chr2 223260632 223260928 -29995655 + AluSg SINE Alu 1 293 -17 45 75 0 0 chr2 223261391 223261485 -29995098 + AT_rich Low_complexity Low_complexity 1 94 0 392 282 145 49 chr2 223261577 223262005 -29994578 - L1ME LINE L1 -390 6040 5562 407 168 19 9 chr2 223262296 223262403 -29994180 - L1MC4 LINE L1 -218 7824 7717 1794 209 18 14 chr2 223262431 223262866 -29993717 - L1MD1 LINE L1 -5 6237 5801 2596 224 44 18 chr2 223262866 223263641 -29992942 - L1ME LINE L1 -2570 3836 3042 1055 243 49 4 chr2 223263640 223263883 -29992700 - L1ME LINE L1 -6145 264 11 * 856 300 27 27 chr2 223264054 223264540 -29992043 - L1MEc LINE L1 -1289 4926 4441 1783 297 68 29 chr2 223264864 223265142 -29991441 + L2 LINE L2 110 376 -2938 717 226 14 33 chr2 223265142 223265354 -29991229 + MER63A DNA MER1_type 1 208 -2 1783 297 68 29 chr2 223265354 223265769 -29990814 + L2 LINE L2 376 830 -2484 2537 280 60 32 chr2 223265775 223266982 -29989601 + L2 LINE L2 2070 3313 0 1088 295 62 68 chr2 223266999 223268620 -29987963 - L1MEc LINE L1 -1793 4422 2813 289 310 59 20 chr2 223268621 223268774 -29987809 + MLT1J LTR MaLR 1 133 -317 1917 162 0 13 chr2 223268861 223269176 -29987407 - AluJb SINE Alu -1 311 1 435 298 76 36 chr2 223269620 223269895 -29986688 - L1MEc LINE L1 -3953 2443 2158 22 56 0 0 chr2 223270068 223270104 -29986479 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr2 223270225 223270248 -29986335 + AT_rich Low_complexity Low_complexity 1 23 0 328 292 25 40 chr2 223270258 223270460 -29986123 - L1MEc LINE L1 -4879 1326 1128 7632 23 4 0 chr2 223270496 223271485 -29985098 - L1PA4 LINE L1 -3 6152 5164 10914 29 1 0 chr2 223271485 223272791 -29983792 + L1PA4 LINE L1 3850 5156 -990 23 0 0 0 chr2 223272904 223272927 -29983656 + AT_rich Low_complexity Low_complexity 1 23 0 229 196 0 20 chr2 223273228 223273279 -29983304 - L1MEc LINE L1 -6058 147 98 22 35 0 0 chr2 223273378 223273407 -29983176 + AT_rich Low_complexity Low_complexity 1 29 0 2925 137 2 0 chr2 223273415 223273888 -29982695 - L1MA4 LINE L1 -14 6286 5813 555 110 44 82 chr2 223274715 223274849 -29981734 + LTR10A LTR ERV1 434 609 0 422 240 155 93 chr2 223274849 223275525 -29981058 + LTR10A-int LTR ERV1 5 722 -5927 881 79 28 11 chr2 223275649 223275826 -29980757 + (GA)n Simple_repeat Simple_repeat 1 180 0 5334 90 30 17 chr2 223275827 223276749 -29979834 + LTR10A-int LTR ERV1 740 1720 -5176 303 250 175 0 chr2 223276751 223276831 -29979752 - LTR8 LTR ERV1 -438 253 160 17226 102 14 19 chr2 223276836 223279748 -29976835 + Harlequin LTR ERV1 1806 6645 -4 1527 222 83 39 chr2 223279751 223280233 -29976350 + LTR10A LTR ERV1 1 503 -106 23 0 0 0 chr2 223280241 223280264 -29976319 + AT_rich Low_complexity Low_complexity 1 23 0 30 45 0 0 chr2 223280709 223280753 -29975830 + AT_rich Low_complexity Low_complexity 1 44 0 31 44 0 0 chr2 223281361 223281406 -29975177 + AT_rich Low_complexity Low_complexity 1 45 0 21 36 0 0 chr2 223282235 223282263 -29974320 + AT_rich Low_complexity Low_complexity 1 28 0 1219 146 14 14 chr2 223282717 223282937 -29973646 - THE1A LTR MaLR -135 220 1 360 344 91 35 chr2 223283227 223283622 -29972961 - L2 LINE L2 -638 2676 2260 244 309 18 18 chr2 223283648 223283758 -29972825 - L2 LINE L2 -2917 397 288 1427 251 58 20 chr2 223284569 223284968 -29971615 - MER74B LTR ERVL -74 548 135 21 0 0 0 chr2 223285555 223285576 -29971007 + AT_rich Low_complexity Low_complexity 1 21 0 2054 119 14 7 chr2 223285676 223285971 -29970612 - AluSq SINE Alu -16 297 1 183 238 10 20 chr2 223285977 223286078 -29970505 + (TA)n Simple_repeat Simple_repeat 2 101 0 21 36 0 0 chr2 223288572 223288600 -29967983 + AT_rich Low_complexity Low_complexity 1 28 0 7160 172 93 69 chr2 223288716 223290347 -29966236 + MER52A LTR ERV1 1 1670 -85 4227 191 16 30 chr2 223290475 223291329 -29965254 + MER52A LTR ERV1 914 1755 0 572 265 22 28 chr2 223292097 223292278 -29964305 + MIR SINE MIR 1 180 -82 268 381 44 17 chr2 223292362 223292543 -29964040 - MIR SINE MIR -56 206 21 2301 90 10 0 chr2 223293739 223294028 -29962555 + AluY SINE Alu 1 292 -19 2220 122 0 7 chr2 223294065 223294368 -29962215 + AluSx SINE Alu 1 301 -11 587 176 0 0 chr2 223294550 223294658 -29961925 + L1MC3 LINE L1 6737 6844 -941 244 280 120 17 chr2 223294668 223294843 -29961740 - L1MC/D LINE L1 -2298 5510 5318 295 240 16 24 chr2 223295066 223295191 -29961392 - L1MC/D LINE L1 -1092 5054 4931 249 33 0 0 chr2 223295452 223295482 -29961101 + (TG)n Simple_repeat Simple_repeat 2 31 0 438 20 0 0 chr2 223295524 223295575 -29961008 + (CA)n Simple_repeat Simple_repeat 2 52 0 1807 310 15 38 chr2 223296714 223297452 -29959131 + L1PB4 LINE L1 12 732 -6117 2156 121 0 7 chr2 223297501 223297798 -29958785 + AluSg SINE Alu 1 295 -15 12444 221 53 26 chr2 223297832 223299051 -29957532 + L1PB4 LINE L1 1145 2330 -4529 1516 117 36 0 chr2 223299051 223299273 -29957310 - MER30 DNA MER1_type 0 230 1 12444 221 53 26 chr2 223299273 223302601 -29953982 + L1PB4 LINE L1 2330 5619 -1240 2124 123 10 7 chr2 223302601 223302911 -29953672 - AluSq SINE Alu -2 311 1 12444 221 53 26 chr2 223302911 223303874 -29952709 + L1PB4 LINE L1 5619 6555 -304 1585 190 7 3 chr2 223303936 223304236 -29952347 + L1PB4 LINE L1 6557 6857 -2 22 35 0 0 chr2 223304365 223304394 -29952189 + AT_rich Low_complexity Low_complexity 1 29 0 207 246 87 29 chr2 223304545 223304614 -29951969 + MIR SINE MIR 38 110 -152 279 308 77 34 chr2 223304773 223304890 -29951693 + MIR SINE MIR 16 137 -71 2188 88 42 0 chr2 223305605 223305890 -29950693 - AluY SINE Alu -14 297 1 334 352 112 17 chr2 223305915 223306148 -29950435 + MIR SINE MIR 8 262 0 300 337 44 33 chr2 223306201 223306382 -29950201 + L2 LINE L2 623 805 -2509 551 255 36 142 chr2 223306580 223307058 -29949525 - MLT1K LTR MaLR -15 573 147 688 259 78 0 chr2 223307109 223307275 -29949308 + MER58A DNA MER1_type 37 215 -9 1861 240 78 71 chr2 223307283 223307928 -29948655 + MLT1E1 LTR MaLR 6 654 0 1339 276 22 4 chr2 223307935 223308406 -29948177 + MLT1E1-int LTR MaLR 8 606 -765 616 293 124 44 chr2 223308445 223308959 -29947624 + L1ME3A LINE L1 4242 4714 -1432 2198 87 0 21 chr2 223308959 223309277 -29947306 + AluY SINE Alu 1 312 0 616 293 124 44 chr2 223309277 223309691 -29946892 + L1ME3A LINE L1 4714 5245 -901 1085 282 70 60 chr2 223309708 223310347 -29946236 + L1ME3A LINE L1 5523 6168 -2 3499 234 43 19 chr2 223310368 223310557 -29946026 + L1M4 LINE L1 4185 4368 -1778 2033 115 17 17 chr2 223310557 223310853 -29945730 + AluSx SINE Alu 1 296 -16 3499 234 43 19 chr2 223310853 223311732 -29944851 + L1M4 LINE L1 4368 5279 -867 2972 181 41 21 chr2 223311734 223312397 -29944186 - L1MA9 LINE L1 -34 6278 5603 1402 272 70 44 chr2 223312459 223312941 -29943642 - L1M3de LINE L1 -5586 1067 573 490 352 37 15 chr2 223312908 223313181 -29943402 - L1M3d LINE L1 -5607 284 6 * 735 168 77 0 chr2 223313237 223313392 -29943191 - L1PA16 LINE L1 -1541 4605 4439 * 2095 193 64 24 chr2 223313381 223314071 -29942512 + L1PA16 LINE L1 4588 5379 -921 2098 102 7 20 chr2 223314071 223314366 -29942217 + AluSq SINE Alu 1 291 -22 2095 193 64 24 chr2 223314366 223314597 -29941986 + L1PA16 LINE L1 5379 5599 -701 * 2626 236 22 15 chr2 223314573 223315256 -29941327 + L1PA13 LINE L1 1410 2097 -4690 16404 65 6 1 chr2 223315256 223317303 -29939280 + HERVK11 LTR ERVK 5896 7953 0 4551 70 10 16 chr2 223317303 223318341 -29938242 + MER11A LTR ERVK 1 1266 0 732 223 6 0 chr2 223318344 223318501 -29938082 + L1PA16 LINE L1 6659 6816 -1 25 51 0 0 chr2 223318501 223318540 -29938043 + AT_rich Low_complexity Low_complexity 1 39 0 2152 124 3 0 chr2 223318714 223319020 -29937563 + AluSx SINE Alu 1 307 -5 330 109 78 0 chr2 223319852 223319916 -29936667 + MER20B DNA MER1_type 666 734 -49 519 291 54 20 chr2 223319985 223320188 -29936395 + L2 LINE L2 2166 2375 -939 3978 127 46 83 chr2 223320197 223320999 -29935584 - LTR19C LTR ERV1 -7 772 1 460 337 169 29 chr2 223321013 223321491 -29935092 + L2 LINE L2 2403 2947 -367 236 329 0 37 chr2 223321685 223321767 -29934816 + L2 LINE L2 2995 3073 -199 206 200 67 0 chr2 223322014 223322059 -29934524 - MIR SINE MIR -183 79 32 24 53 0 0 chr2 223322189 223322227 -29934356 + AT_rich Low_complexity Low_complexity 1 38 0 240 200 27 27 chr2 223322638 223322713 -29933870 + CT-rich Low_complexity Low_complexity 1 75 0 29 78 0 0 chr2 223322882 223322946 -29933637 + AT_rich Low_complexity Low_complexity 1 64 0 27 0 0 0 chr2 223323015 223323042 -29933541 + AT_rich Low_complexity Low_complexity 1 27 0 883 149 58 17 chr2 223323947 223324221 -29932362 + LTR38B LTR ERV1 1 337 -273 1814 175 76 0 chr2 223324221 223324536 -29932047 - MER1B DNA MER1_type 0 339 1 925 260 28 16 chr2 223324536 223324790 -29931793 + LTR38 LTR ERV1 289 545 -11 227 323 0 0 chr2 223325264 223325360 -29931223 + T-rich Low_complexity Low_complexity 5 100 0 383 270 68 22 chr2 223326249 223326527 -29930056 - L1MEd LINE L1 -3733 2396 2106 202 289 0 33 chr2 223326542 223326632 -29929951 + CT-rich Low_complexity Low_complexity 3 89 0 786 297 45 42 chr2 223326857 223326977 -29929606 - L1MEd LINE L1 -4574 1736 1618 1989 128 0 20 chr2 223326977 223327283 -29929300 + AluSg SINE Alu 1 300 -10 786 297 45 42 chr2 223327283 223327860 -29928723 - L1MEd LINE L1 -4692 1618 997 28 0 0 0 chr2 223329649 223329677 -29926906 + AT_rich Low_complexity Low_complexity 1 28 0 206 372 99 0 chr2 223329763 223329884 -29926699 - L2 LINE L2 0 3272 3140 294 143 0 0 chr2 223330578 223330627 -29925956 + (TG)n Simple_repeat Simple_repeat 2 50 0 1823 155 35 25 chr2 223331158 223331526 -29925057 + THE1C LTR MaLR 1 372 -3 6408 115 54 1 chr2 223331537 223332499 -29924084 + THE1C-int LTR MaLR 1 1013 -567 26134 135 19 8 chr2 223332598 223334530 -29922053 - MER52-int LTR ERV1 -704 6387 4477 3373 81 7 18 chr2 223334530 223334988 -29921595 + MLT2A2 LTR ERVL 1 453 0 26134 135 19 8 chr2 223334988 223337002 -29919581 - MER52-int LTR ERV1 -2614 4477 2400 406 73 0 0 chr2 223337004 223337059 -29919524 - MLT2A2 LTR ERVL 0 453 399 304 288 63 36 chr2 223337060 223337171 -29919412 - L1MC4 LINE L1 -1314 6728 6615 * 331 281 22 0 chr2 223337155 223337244 -29919339 + L1MC4 LINE L1 6615 6705 -1337 457 196 17 12 chr2 223337254 223337427 -29919156 + (TA)n Simple_repeat Simple_repeat 2 175 0 2935 95 2 5 chr2 223337443 223337842 -29918741 - MLT2A1 LTR ERVL -46 398 1 42189 85 12 16 chr2 223337842 223343515 -29913068 - HERVL-A1 LTR ERVL 0 5654 1 354 43 43 0 chr2 223343515 223343562 -29913021 - MLT2A1 LTR ERVL 0 453 405 * 1269 103 0 0 chr2 223343555 223343730 -29912853 - MLT2A1 LTR ERVL -269 175 1 2745 116 10 0 chr2 223343730 223344128 -29912455 - MER52A-int LTR ERV1 -4689 2402 2001 934 204 52 17 chr2 223344128 223344513 -29912070 - MER52A-int LTR ERV1 -5421 1670 1006 4600 208 25 6 chr2 223344538 223345408 -29911175 - MER52A-int LTR ERV1 -6204 887 1 769 197 67 129 chr2 223345542 223346051 -29910532 - MER52A LTR ERV1 -138 893 263 4105 111 5 5 chr2 223346061 223346631 -29909952 + THE1C-int LTR MaLR 1011 1580 0 1779 147 40 40 chr2 223346631 223347006 -29909577 + THE1C LTR MaLR 1 375 0 24 0 0 0 chr2 223347755 223347779 -29908804 + AT_rich Low_complexity Low_complexity 1 24 0 902 281 20 103 chr2 223347821 223348316 -29908267 + L2 LINE L2 2854 3307 -6 561 278 67 72 chr2 223348323 223348697 -29907886 + Charlie8 DNA MER1_type 116 487 -1930 23 33 0 0 chr2 223349669 223349699 -29906884 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 223349935 223349956 -29906627 + AT_rich Low_complexity Low_complexity 1 21 0 497 230 158 45 chr2 223350848 223351113 -29905470 - MLT1I LTR MaLR -41 368 74 40 59 0 0 chr2 223351298 223351366 -29905217 + AT_rich Low_complexity Low_complexity 1 68 0 794 251 63 49 chr2 223351843 223352193 -29904390 - L1ME4a LINE L1 -252 5869 5515 817 250 22 16 chr2 223352304 223352488 -29904095 - MER5A DNA MER1_type -4 185 1 44 46 0 0 chr2 223353385 223353450 -29903133 + AT_rich Low_complexity Low_complexity 1 65 0 2032 145 3 3 chr2 223353753 223354056 -29902527 - AluJb SINE Alu -7 305 3 271 367 67 0 chr2 223354340 223354460 -29902123 + L2 LINE L2 3138 3265 -7 22 0 0 0 chr2 223354718 223354740 -29901843 + AT_rich Low_complexity Low_complexity 1 22 0 1795 196 47 3 chr2 223354740 223355127 -29901456 - L1MA4 LINE L1 -33 6267 5864 1549 118 9 0 chr2 223355115 223355344 -29901239 + L1MA4 LINE L1 5665 5895 -405 * 22 80 0 0 chr2 223355521 223355571 -29901012 + AT_rich Low_complexity Low_complexity 1 50 0 273 302 59 69 chr2 223355659 223355861 -29900722 - MIR SINE MIR -3 259 60 428 290 53 41 chr2 223355880 223356049 -29900534 - MER5B DNA MER1_type -7 171 1 21 71 0 0 chr2 223356716 223356758 -29899825 + AT_rich Low_complexity Low_complexity 1 42 0 378 312 5 58 chr2 223356768 223356973 -29899610 + L2 LINE L2 3115 3308 -5 297 337 41 20 chr2 223357042 223357238 -29899345 + L1ME4a LINE L1 5502 5701 -420 246 269 85 7 chr2 223357407 223357548 -29899035 + L1ME4a LINE L1 5965 6116 -5 2059 106 13 3 chr2 223357561 223357862 -29898721 + AluSx SINE Alu 2 305 -7 24 32 0 0 chr2 223358548 223358579 -29898004 + AT_rich Low_complexity Low_complexity 1 31 0 2418 81 10 0 chr2 223361036 223361344 -29895239 + AluY SINE Alu 1 311 0 198 0 0 0 chr2 223362417 223362439 -29894144 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1409 138 0 0 chr2 223362441 223362644 -29893939 - AluSg/x SINE Alu -24 288 86 1017 324 155 27 chr2 223362733 223363935 -29892648 + L2 LINE L2 1781 3135 -178 356 272 121 17 chr2 223363964 223364137 -29892446 + MLT1J2 LTR MaLR 1 191 -259 21 0 0 0 chr2 223364297 223364318 -29892265 + AT_rich Low_complexity Low_complexity 1 21 0 1819 294 69 24 chr2 223364332 223365288 -29891295 - L2 LINE L2 0 3313 2307 22 0 0 0 chr2 223365477 223365499 -29891084 + AT_rich Low_complexity Low_complexity 1 22 0 245 234 13 13 chr2 223365545 223365622 -29890961 + (TA)n Simple_repeat Simple_repeat 1 77 0 23 33 0 0 chr2 223365938 223365968 -29890615 + AT_rich Low_complexity Low_complexity 1 30 0 473 347 99 24 chr2 223367475 223367887 -29888696 + L2 LINE L2 2301 2743 -571 238 312 184 21 chr2 223368193 223368334 -29888249 + L2 LINE L2 3109 3272 0 491 239 37 9 chr2 223369867 223369976 -29886607 - 5S rRNA rRNA -9 112 1 1480 189 32 21 chr2 223370988 223371273 -29885310 - AluJb SINE Alu -21 291 4 32 0 0 0 chr2 223371305 223371337 -29885246 + AT_rich Low_complexity Low_complexity 1 32 0 297 258 89 8 chr2 223371489 223371613 -29884970 - MIR SINE MIR -1 261 128 213 305 99 38 chr2 223371643 223371774 -29884809 + L2 LINE L2 3134 3272 0 630 228 6 19 chr2 223371925 223372083 -29884500 - MER106A DNA MER1_type -80 156 1 23 0 0 0 chr2 223372629 223372652 -29883931 + AT_rich Low_complexity Low_complexity 1 23 0 1191 277 54 26 chr2 223372659 223373157 -29883426 - LTR38 LTR ERV1 0 556 45 22 35 0 0 chr2 223373330 223373359 -29883224 + AT_rich Low_complexity Low_complexity 1 29 0 30 59 0 0 chr2 223374760 223374811 -29881772 + AT_rich Low_complexity Low_complexity 1 51 0 363 351 70 19 chr2 223375533 223375792 -29880791 - MLT1K LTR MaLR -2 586 315 4687 34 3 19 chr2 223376893 223377144 -29879439 + L1PA4 LINE L1 5579 5832 -323 2689 23 0 0 chr2 223377144 223377448 -29879135 + AluYb8 SINE Alu 1 304 -14 4687 34 3 19 chr2 223377448 223377782 -29878801 + L1PA4 LINE L1 5832 6155 0 1888 113 0 4 chr2 223377838 223378123 -29878460 - AluSg SINE Alu 0 310 27 260 301 14 0 chr2 223378314 223378387 -29878196 + (TCCA)n Simple_repeat Simple_repeat 4 77 0 234 100 0 0 chr2 223378416 223378446 -29878137 - L1P LINE L1 -5799 347 318 3907 30 2 0 chr2 223378446 223378942 -29877641 + L1P LINE L1 2914 3410 -2736 27 29 0 0 chr2 223379232 223379266 -29877317 + AT_rich Low_complexity Low_complexity 1 34 0 21 36 0 0 chr2 223379880 223379908 -29876675 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 223380849 223380871 -29875712 + AT_rich Low_complexity Low_complexity 1 22 0 2053 4 0 0 chr2 223383324 223383557 -29873026 - L1PA2 LINE L1 -4 6151 5919 369 273 91 0 chr2 223385399 223385509 -29871074 - L2 LINE L2 -2 3311 3192 5529 183 36 14 chr2 223385804 223387135 -29869448 + L1PA16 LINE L1 4125 5543 -623 1246 198 55 11 chr2 223387135 223387408 -29869175 - AluJo SINE Alu -27 285 1 5529 183 36 14 chr2 223387408 223388032 -29868551 + L1PA16 LINE L1 5543 6152 -14 2294 124 14 19 chr2 223388146 223388510 -29868073 + THE1B LTR MaLR 1 362 -2 798 233 57 0 chr2 223388661 223388854 -29867729 + MLT1C LTR MaLR 1 204 -263 1151 230 17 62 chr2 223388912 223389157 -29867426 + MLT1C LTR MaLR 181 389 -78 2290 68 0 27 chr2 223389157 223389452 -29867131 + AluY SINE Alu 1 287 -24 1151 230 17 62 chr2 223389452 223389527 -29867056 + MLT1C LTR MaLR 389 466 -1 446 293 215 32 chr2 223391257 223391568 -29865015 - LTR16A LTR ERVL -82 368 1 196 137 39 0 chr2 223391651 223391702 -29864881 + (TA)n Simple_repeat Simple_repeat 2 54 0 21 71 0 0 chr2 223391737 223391779 -29864804 + AT_rich Low_complexity Low_complexity 1 42 0 2556 111 3 11 chr2 223391899 223392277 -29864306 + THE1C LTR MaLR 1 375 0 9437 112 65 36 chr2 223392277 223393812 -29862771 + THE1C-int LTR MaLR 1 1580 0 2380 119 0 53 chr2 223393812 223394132 -29862451 + THE1C LTR MaLR 1 298 -77 2358 101 0 0 chr2 223394132 223394439 -29862144 - AluSg SINE Alu -3 307 1 2380 119 0 53 chr2 223394439 223394514 -29862069 + THE1C LTR MaLR 298 375 0 1437 256 106 74 chr2 223394739 223395686 -29860897 - HAL1 LINE L1 0 2507 1531 614 270 209 46 chr2 223395754 223396324 -29860259 - HAL1 LINE L1 -1796 711 49 22 35 0 0 chr2 223397272 223397301 -29859282 + AT_rich Low_complexity Low_complexity 1 29 0 1270 119 95 0 chr2 223397541 223397751 -29858832 + MER30 DNA MER1_type 1 230 0 644 264 25 0 chr2 223398170 223398329 -29858254 + MER63A DNA MER1_type 48 210 0 1795 163 49 3 chr2 223398345 223398670 -29857913 - Tigger3b DNA MER2_type -6 1225 886 3411 132 33 38 chr2 223398670 223399305 -29857278 - Tigger3b DNA MER2_type -599 632 1 313 234 88 73 chr2 223399326 223399531 -29857052 - HAL1 LINE L1 -5 2502 2295 323 318 162 15 chr2 223399531 223399729 -29856854 - HAL1 LINE L1 -1171 1336 1110 354 23 0 0 chr2 223400207 223400250 -29856333 + (TG)n Simple_repeat Simple_repeat 2 44 0 2038 128 7 3 chr2 223401315 223401613 -29854970 - AluSx SINE Alu -13 299 1 289 316 12 18 chr2 223402522 223402693 -29853890 - L1ME4a LINE L1 0 6121 5952 1517 260 22 13 chr2 223403151 223403608 -29852975 + L1ME2 LINE L1 5555 6015 -149 1513 194 94 6 chr2 223403639 223403968 -29852615 + MLT1B LTR MaLR 1 358 -32 1005 231 21 21 chr2 223403972 223404309 -29852274 + L1MEc LINE L1 736 1072 -5324 236 208 52 13 chr2 223405077 223405154 -29851429 - MER116 DNA Mariner 0 80 1 3223 29 0 0 chr2 223405195 223405654 -29850929 - L1PA3 LINE L1 -514 5641 5183 4412 29 2 0 chr2 223405655 223406176 -29850407 + L1PA3 LINE L1 5631 6152 -3 24 0 0 0 chr2 223406320 223406344 -29850239 + AT_rich Low_complexity Low_complexity 1 24 0 215 229 0 0 chr2 223406801 223406849 -29849734 + (TTCA)n Simple_repeat Simple_repeat 1 48 0 295 60 40 0 chr2 223407669 223407719 -29848864 + (TCTA)n Simple_repeat Simple_repeat 3 54 0 2439 50 0 50 chr2 223408883 223409203 -29847380 - AluY SINE Alu -7 304 1 216 158 0 0 chr2 223409793 223409831 -29846752 + (TG)n Simple_repeat Simple_repeat 1 38 0 2068 128 0 3 chr2 223410190 223410487 -29846096 + AluSx SINE Alu 1 296 -16 957 279 47 3 chr2 223411691 223412053 -29844530 + L1M4 LINE L1 3087 3464 -2682 360 327 78 0 chr2 223412080 223412297 -29844286 - L1M4 LINE L1 -776 5370 5137 356 293 77 40 chr2 223412480 223412883 -29843700 - L1M4 LINE L1 -1318 4828 4411 * 636 275 35 47 chr2 223412870 223413212 -29843371 - HAL1 LINE L1 -1217 1290 953 * 5863 158 58 5 chr2 223413206 223414457 -29842126 - L1MC1 LINE L1 -5 6328 5011 243 329 7 21 chr2 223414487 223414630 -29841953 - HAL1 LINE L1 -1555 952 812 266 198 129 20 chr2 223415417 223415518 -29841065 - L2 LINE L2 -107 3206 3095 686 257 99 72 chr2 223416781 223417074 -29839509 - L1MC/D LINE L1 -2006 5802 5490 2161 97 0 0 chr2 223417074 223417364 -29839219 - AluSc SINE Alu -19 290 1 686 257 99 72 chr2 223417364 223417545 -29839038 - L1MC/D LINE L1 -2318 5490 5315 24 0 0 0 chr2 223417756 223417780 -29838803 + AT_rich Low_complexity Low_complexity 1 24 0 28 29 0 0 chr2 223418795 223418830 -29837753 + AT_rich Low_complexity Low_complexity 1 35 0 318 316 66 49 chr2 223419264 223419568 -29837015 - L1MC/D LINE L1 -1481 4665 4357 21 104 0 0 chr2 223419756 223419833 -29836750 + AT_rich Low_complexity Low_complexity 1 77 0 2062 162 46 36 chr2 223421482 223422033 -29834550 + MLT2A2 LTR ERVL 1 554 0 3507 252 59 39 chr2 223422919 223424091 -29832492 + L1M2a LINE L1 1587 2552 -4615 1686 172 40 35 chr2 223424091 223424464 -29832119 + THE1C LTR MaLR 1 375 0 3507 252 59 39 chr2 223424464 223425754 -29830829 + L1M2a LINE L1 2552 3814 -3353 23 68 0 0 chr2 223426276 223426320 -29830263 + AT_rich Low_complexity Low_complexity 1 44 0 666 200 0 0 chr2 223426490 223426605 -29829978 - FLAM_A SINE Alu -18 115 1 276 110 68 30 chr2 223427389 223427455 -29829128 + L1MC1 LINE L1 6268 6333 0 703 256 59 44 chr2 223427602 223427923 -29828660 - L1MC5 LINE L1 -36 7925 7600 23 33 0 0 chr2 223427954 223427984 -29828599 + AT_rich Low_complexity Low_complexity 1 30 0 27 0 0 0 chr2 223429321 223429348 -29827235 + AT_rich Low_complexity Low_complexity 1 27 0 1958 142 0 0 chr2 223429735 223430017 -29826566 - AluSx SINE Alu -30 282 1 1000 126 49 0 chr2 223430241 223430424 -29826159 + L1MA3 LINE L1 6111 6302 -3 21 36 0 0 chr2 223430607 223430635 -29825948 + AT_rich Low_complexity Low_complexity 1 28 0 389 301 57 34 chr2 223430830 223431039 -29825544 - HAL1 LINE L1 -781 1726 1513 1076 157 5 44 chr2 223431295 223431499 -29825084 - MLT1A1 LTR MaLR -2 363 168 309 241 24 12 chr2 223431495 223431578 -29825005 - MLT1A1 LTR MaLR -114 251 168 * 297 253 24 12 chr2 223431574 223431657 -29824926 - MLT1A1 LTR MaLR -114 251 168 * 1264 165 24 35 chr2 223431653 223431907 -29824676 - MLT1A1 LTR MaLR -114 251 1 448 319 75 45 chr2 223431909 223432210 -29824373 - HAL1 LINE L1 -1289 1218 901 1476 209 59 16 chr2 223432210 223432584 -29823999 - MLT1B LTR MaLR 0 390 1 448 319 75 45 chr2 223432584 223432680 -29823903 - HAL1 LINE L1 -1606 901 809 1924 119 0 0 chr2 223433105 223433366 -29823217 + AluSx SINE Alu 40 300 -12 833 286 12 40 chr2 223433538 223433786 -29822797 - MIR SINE MIR -8 254 14 24 0 0 0 chr2 223433866 223433890 -29822693 + AT_rich Low_complexity Low_complexity 1 24 0 317 308 41 27 chr2 223434056 223434202 -29822381 - L2 LINE L2 -1 3312 3165 358 347 77 20 chr2 223434880 223435128 -29821455 - L2 LINE L2 -2406 908 647 186 43 0 0 chr2 223436016 223436039 -29820544 + (T)n Simple_repeat Simple_repeat 1 23 0 42696 30 21 1 chr2 223436085 223442116 -29814467 - L1HS LINE L1 0 6155 2 408 272 139 38 chr2 223442750 223442908 -29813675 - MER5A DNA MER1_type -9 180 7 346 0 0 98 chr2 223443495 223443577 -29813006 + (TA)n Simple_repeat Simple_repeat 2 75 0 2412 127 3 0 chr2 223444859 223445244 -29811339 - L1P LINE L1 -1075 5071 4686 * 4001 82 2 30 chr2 223445242 223445816 -29810767 + L1PA13 LINE L1 5558 6115 -48 375 167 0 0 chr2 223445810 223445876 -29810707 - L1PA13 LINE L1 -49 6114 6049 * 231 83 0 0 chr2 223445895 223445931 -29810652 + L1PA12 LINE L1 6131 6166 -2 232 143 0 0 chr2 223447493 223447528 -29809055 + U2 snRNA snRNA 1 35 -153 251 189 56 67 chr2 223448814 223448904 -29807679 + LTR48B LTR ERV1 1 89 -555 * 1261 194 81 58 chr2 223448879 223449322 -29807261 + MER39 LTR ERV1 249 581 -4 292 326 62 16 chr2 223449390 223449583 -29807000 - L1ME LINE L1 -536 5585 5384 1438 221 17 7 chr2 223450079 223450368 -29806215 - AluJo SINE Alu -20 292 1 28 29 0 0 chr2 223450934 223450969 -29805614 + AT_rich Low_complexity Low_complexity 1 35 0 365 179 0 11 chr2 223453441 223453536 -29803047 + GA-rich Low_complexity Low_complexity 3 96 0 2093 138 0 0 chr2 223453760 223454058 -29802525 + AluSq SINE Alu 1 298 -15 216 0 0 0 chr2 223454289 223454313 -29802270 + (T)n Simple_repeat Simple_repeat 1 24 0 441 168 140 19 chr2 223454659 223454766 -29801817 - MIR SINE MIR -40 222 103 245 284 0 68 chr2 223455965 223456053 -29800530 - L2 LINE L2 -23 3249 3168 261 0 0 0 chr2 223457239 223457268 -29799315 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1976 147 7 0 chr2 223457643 223457935 -29798648 - AluSx SINE Alu -17 295 2 1304 186 152 22 chr2 223458563 223458885 -29797698 - MLT1A1 LTR MaLR 0 365 2 3641 241 106 52 chr2 223458886 223460220 -29796363 - MLT1A1-int LTR MaLR 0 1735 330 2839 16 0 0 chr2 223460883 223461201 -29795382 + AluYb8 SINE Alu 1 318 0 2075 138 0 0 chr2 223462002 223462300 -29794283 + AluSx SINE Alu 1 298 -14 962 202 0 0 chr2 223462579 223462752 -29793831 - L1PA16 LINE L1 -20 6146 5974 * 4132 150 17 12 chr2 223462751 223463470 -29793113 + L1PA16 LINE L1 5238 5960 -206 1849 161 19 54 chr2 223463913 223464390 -29792193 - MER31A LTR ERV1 -10 475 1 2264 80 0 3 chr2 223466128 223466440 -29790143 - AluY SINE Alu 0 311 1 221 390 93 20 chr2 223466503 223466749 -29789834 + L2 LINE L2 2549 2812 -502 201 74 0 0 chr2 223467307 223467334 -29789249 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 21 57 0 0 chr2 223467470 223467505 -29789078 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr2 223469543 223469568 -29787015 + AT_rich Low_complexity Low_complexity 1 25 0 3459 98 65 21 chr2 223470105 223470675 -29785908 + LTR49 LTR ERV1 1 595 0 21 0 0 0 chr2 223470761 223470782 -29785801 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 223471398 223471419 -29785164 + AT_rich Low_complexity Low_complexity 1 21 0 2101 164 11 63 chr2 223471704 223472062 -29784521 + Tigger2a DNA MER2_type 1 332 -2376 1808 124 52 0 chr2 223472062 223472353 -29784230 - AluSg SINE Alu 0 305 1 2101 164 11 63 chr2 223472353 223472451 -29784132 + Tigger2a DNA MER2_type 332 434 0 24 53 0 0 chr2 223472471 223472509 -29784074 + AT_rich Low_complexity Low_complexity 1 38 0 244 271 17 0 chr2 223472822 223472881 -29783702 - L2 LINE L2 -4 3268 3209 1856 228 120 15 chr2 223473185 223473768 -29782815 - LTR48B LTR ERV1 0 644 1 1297 149 14 27 chr2 223473980 223474201 -29782382 + MER7A DNA MER2_type 2 217 -129 2004 154 33 27 chr2 223474202 223474539 -29782044 - MER1B DNA MER1_type 0 339 1 619 197 25 16 chr2 223474539 223474660 -29781923 + MER7A DNA MER2_type 209 330 -6 2136 95 0 14 chr2 223474717 223475013 -29781570 + AluSc SINE Alu 1 292 -17 328 273 39 78 chr2 223475368 223475522 -29781061 - MLT1I LTR MaLR -30 379 232 181 339 32 0 chr2 223475547 223475609 -29780974 + L2 LINE L2 3134 3197 -75 474 315 63 26 chr2 223475609 223475958 -29780625 - L1M4 LINE L1 -789 5357 4996 1782 106 117 8 chr2 223476293 223476558 -29780025 - AluSg1 SINE Alu -15 294 1 194 349 46 37 chr2 223476732 223476841 -29779742 + L2 LINE L2 3145 3254 -18 48 0 0 0 chr2 223477276 223477324 -29779259 + AT_rich Low_complexity Low_complexity 1 48 0 376 256 94 28 chr2 223477453 223477633 -29778950 - L1MC5 LINE L1 -48 7913 7722 903 100 0 0 chr2 223477635 223477755 -29778828 - AluY SINE Alu -14 297 178 712 154 0 0 chr2 223477755 223477859 -29778724 + FLAM_C SINE Alu 21 124 -19 2032 123 0 3 chr2 223477863 223478155 -29778428 - AluY SINE Alu -20 291 1 1359 264 99 26 chr2 223478181 223478897 -29777686 - L1ME3 LINE L1 -8 6154 5368 4471 21 2 0 chr2 223480548 223481068 -29775515 - L1PA4 LINE L1 -8 6147 5627 1968 78 14 14 chr2 223481068 223481349 -29775234 - AluY SINE Alu -30 281 1 28 0 0 0 chr2 223482492 223482520 -29774063 + AT_rich Low_complexity Low_complexity 1 28 0 3223 129 53 31 chr2 223482531 223482920 -29773663 + LTR49 LTR ERV1 1 409 -186 3339 153 24 0 chr2 223482920 223483461 -29773122 - MER41C LTR ERV1 0 554 1 3223 129 53 31 chr2 223483461 223483651 -29772932 + LTR49 LTR ERV1 409 593 -2 533 294 178 5 chr2 223484745 223484959 -29771624 + L2 LINE L2 2210 2460 -854 494 107 0 0 chr2 223484959 223485034 -29771549 + HY3 scRNA scRNA 26 100 -1 2049 88 39 14 chr2 223485055 223485339 -29771244 - AluSq SINE Alu -22 291 1 1795 280 86 29 chr2 223485352 223486180 -29770403 + L2 LINE L2 2446 3313 0 439 271 43 21 chr2 223487317 223487457 -29769126 - MIR SINE MIR -34 228 86 205 232 183 37 chr2 223487478 223487560 -29769023 - L2 LINE L2 -14 3299 3206 2053 123 13 7 chr2 223487677 223487987 -29768596 + AluSx SINE Alu 1 312 0 413 248 43 43 chr2 223488228 223488259 -29768324 - MIR SINE MIR -82 180 150 1323 78 6 0 chr2 223488259 223488439 -29768144 + L1PA8 LINE L1 5992 6172 0 413 248 43 43 chr2 223488439 223488548 -29768035 - MIR SINE MIR -111 151 40 218 340 50 43 chr2 223488939 223489080 -29767503 - MER5A DNA MER1_type -6 183 42 344 172 0 62 chr2 223489649 223489713 -29766870 + Alu SINE Alu 1 55 -247 1824 154 3 7 chr2 223489721 223490007 -29766576 - AluSq SINE Alu -28 285 1 838 179 0 0 chr2 223490025 223490170 -29766413 + FRAM SINE Alu 1 137 -39 205 289 57 91 chr2 223490445 223490708 -29765875 + L2 LINE L2 2933 3186 -127 23 0 0 0 chr2 223491009 223491032 -29765551 + AT_rich Low_complexity Low_complexity 1 23 0 4281 171 47 12 chr2 223491443 223492552 -29764031 + L1MA5 LINE L1 4955 6116 -184 859 52 0 0 chr2 223492731 223492846 -29763737 + L1P LINE L1 3293 3407 -2739 2133 211 70 19 chr2 223494207 223494682 -29761901 - LTR53 LTR ERVL -15 504 6 4909 69 14 12 chr2 223494957 223495623 -29760960 - MER4E LTR ERV1 0 766 100 2954 136 17 0 chr2 223496645 223497123 -29759460 - LTR19A LTR ERV1 0 486 1 1937 160 0 0 chr2 223497491 223497784 -29758799 + AluSx SINE Alu 3 295 -17 1589 141 23 30 chr2 223498363 223498482 -29758101 + L1MA5 LINE L1 5999 6117 -183 2606 68 0 0 chr2 223498482 223498792 -29757791 - AluY SINE Alu -1 310 1 1589 141 23 30 chr2 223498792 223498976 -29757607 + L1MA5 LINE L1 6117 6300 0 22 0 0 0 chr2 223499010 223499032 -29757551 + AT_rich Low_complexity Low_complexity 1 22 0 22 70 0 0 chr2 223499375 223499418 -29757165 + AT_rich Low_complexity Low_complexity 1 43 0 308 348 50 33 chr2 223499987 223500168 -29756415 + MER5A DNA MER1_type 6 189 0 2499 177 11 11 chr2 223500354 223500806 -29755777 + LOR1b LTR ERV1 10 461 0 315 272 37 86 chr2 223502886 223502995 -29753588 + MIR SINE MIR 13 113 -149 2212 107 0 7 chr2 223502995 223503293 -29753290 - AluSx SINE Alu -16 296 1 315 272 37 86 chr2 223503293 223503345 -29753238 + MIR SINE MIR 113 166 -96 1050 139 188 15 chr2 223503345 223503547 -29753036 - MSTA LTR MaLR 0 428 192 772 80 0 18 chr2 223503547 223503660 -29752923 + L1MA1 LINE L1 6192 6302 0 362 276 135 10 chr2 223503671 223503863 -29752720 - L1M4 LINE L1 -917 6648 6433 2167 109 0 31 chr2 223503868 223504190 -29752393 - AluSx SINE Alu 0 312 1 302 325 118 37 chr2 223504370 223504693 -29751890 + HAL1 LINE L1 1031 1379 -1128 192 203 172 16 chr2 223504959 223505023 -29751560 - L2 LINE L2 -20 3252 3179 237 140 40 20 chr2 223505575 223505625 -29750958 + (TGAA)n Simple_repeat Simple_repeat 1 51 0 23 0 0 0 chr2 223506679 223506702 -29749881 + AT_rich Low_complexity Low_complexity 1 23 0 782 286 108 52 chr2 223507609 223508070 -29748513 + LTR33A LTR ERVL 8 494 -29 2224 111 0 0 chr2 223508070 223508367 -29748216 + AluSx SINE Alu 1 297 -15 317 296 71 64 chr2 223508825 223509092 -29747491 - L2 LINE L2 -138 3175 2907 180 0 0 0 chr2 223509219 223509239 -29747344 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 309 282 35 0 chr2 223509317 223509402 -29747181 - MIR SINE MIR -13 249 162 967 133 173 0 chr2 223509402 223509575 -29747008 + MSTA LTR MaLR 1 203 -225 9271 170 12 2 chr2 223509575 223511300 -29745283 - L1M4 LINE L1 -1116 6449 4708 3751 175 22 4 chr2 223511301 223512564 -29744019 - L1M4 LINE L1 -3303 4262 2977 17299 167 29 16 chr2 223512576 223512995 -29743588 - L1PB2 LINE L1 -1 6866 6454 2238 110 3 3 chr2 223512995 223513303 -29743280 - AluY SINE Alu -3 308 1 17299 167 29 16 chr2 223513303 223515726 -29740857 - L1PB2 LINE L1 -413 6454 4063 2265 90 3 3 chr2 223515726 223516025 -29740558 - AluY SINE Alu -12 299 1 17299 167 29 16 chr2 223516025 223519701 -29736882 - L1PB2 LINE L1 -2804 4063 251 1810 132 53 63 chr2 223519701 223520080 -29736503 - THE1C LTR MaLR 0 375 1 17299 167 29 16 chr2 223520080 223520333 -29736250 - L1PB2 LINE L1 -6616 251 3 1417 111 25 30 chr2 223520343 223520373 -29736210 - L1M4 LINE L1 -4569 2996 2967 3295 59 0 92 chr2 223520373 223520589 -29735994 + MLT2A1 LTR ERVL 1 149 -295 2078 18 0 0 chr2 223520589 223520817 -29735766 + AluYa5 SINE Alu 83 310 -1 3295 59 0 92 chr2 223520817 223521089 -29735494 + MLT2A1 LTR ERVL 149 444 0 1417 111 25 30 chr2 223521089 223521199 -29735384 - L1M4 LINE L1 -4598 2967 2855 207 0 0 0 chr2 223521199 223521222 -29735361 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1417 111 25 30 chr2 223521222 223521315 -29735268 - L1M4 LINE L1 -4710 2855 2763 567 0 0 0 chr2 223521316 223521379 -29735204 + (TA)n Simple_repeat Simple_repeat 1 63 0 291 54 0 0 chr2 223521970 223522007 -29734576 + (TA)n Simple_repeat Simple_repeat 1 37 0 9956 173 76 18 chr2 223522025 223522390 -29734193 - L1M4 LINE L1 -4809 2756 2413 2375 99 0 3 chr2 223522390 223522703 -29733880 - AluSq SINE Alu -1 312 1 9956 173 76 18 chr2 223522703 223524969 -29731614 - L1M4 LINE L1 -5152 2413 11 345 332 92 33 chr2 223525004 223525582 -29731001 + L1ME3A LINE L1 5258 5869 -301 273 29 0 0 chr2 223527207 223527241 -29729342 + (CA)n Simple_repeat Simple_repeat 1 34 0 1182 188 8 25 chr2 223528190 223528430 -29728153 - AluJo SINE Alu -5 307 72 695 222 14 21 chr2 223528726 223528870 -29727713 - MLT2F LTR ERVL -520 143 1 860 320 32 3 chr2 223529406 223529722 -29726861 - ERVL LTR ERVL -5087 677 353 2189 249 60 32 chr2 223529742 223530372 -29726211 - MLT2F LTR ERVL -15 648 1 545 276 221 0 chr2 223530688 223530869 -29725714 + MIR SINE MIR 11 231 -31 894 228 111 14 chr2 223531083 223531615 -29724968 - L1MC/D LINE L1 -774 5585 5002 25 51 0 0 chr2 223532550 223532589 -29723994 + AT_rich Low_complexity Low_complexity 1 39 0 279 0 0 0 chr2 223532974 223533005 -29723578 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2203 80 0 68 chr2 223533034 223533358 -29723225 + AluY SINE Alu 1 302 -9 21 0 0 0 chr2 223533479 223533500 -29723083 + AT_rich Low_complexity Low_complexity 1 21 0 1743 170 3 10 chr2 223533630 223533936 -29722647 + L1MC1 LINE L1 6030 6333 0 500 184 120 8 chr2 223534164 223534289 -29722294 + L1ME3A LINE L1 5953 6091 -79 1883 50 139 0 chr2 223534821 223535079 -29721504 - AluY SINE Alu -17 294 1 264 156 47 31 chr2 223535907 223535971 -29720612 + MIR SINE MIR 97 161 -101 193 212 0 0 chr2 223535975 223536008 -29720575 + L2 LINE L2 3214 3246 -26 476 264 238 5 chr2 223537108 223537301 -29719282 - MIR SINE MIR -10 252 15 2208 106 3 0 chr2 223537377 223537670 -29718913 + AluSc SINE Alu 1 294 -15 849 112 0 0 chr2 223538893 223539009 -29717574 - AluSc SINE Alu -14 295 180 230 81 27 0 chr2 223539017 223539054 -29717529 + (TATG)n Simple_repeat Simple_repeat 3 40 0 3952 110 5 49 chr2 223539060 223539694 -29716889 + LTR14B LTR ERVK 3 608 0 303 357 40 53 chr2 223540676 223541134 -29715449 - L2 LINE L2 -13 3259 2748 334 349 54 16 chr2 223542128 223542515 -29714068 + L1ME4a LINE L1 5512 5913 -208 2043 209 70 4 chr2 223542520 223542994 -29713589 - MLT1D LTR MaLR 0 505 1 343 256 0 0 chr2 223543008 223543086 -29713497 + MER94 DNA DNA 16 93 -41 411 279 81 57 chr2 223543174 223543421 -29713162 - HAL1 LINE L1 -1020 1487 1235 237 159 0 0 chr2 223543443 223543487 -29713096 + (CATATA)n Simple_repeat Simple_repeat 4 47 0 216 67 0 0 chr2 223543992 223544022 -29712561 + (CA)n Simple_repeat Simple_repeat 2 31 0 2251 194 55 25 chr2 223544168 223544657 -29711926 + MER82 DNA MER2_type 11 514 -139 299 264 47 81 chr2 223545951 223546099 -29710484 + MIR3 SINE MIR 33 175 -33 21 0 0 0 chr2 223546507 223546528 -29710055 + AT_rich Low_complexity Low_complexity 1 21 0 2073 112 29 0 chr2 223546554 223546859 -29709724 - AluSx SINE Alu 0 313 1 266 0 29 0 chr2 223547245 223547279 -29709304 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 2022 104 0 31 chr2 223547280 223547568 -29709015 - AluY SINE Alu -32 279 1 21 36 0 0 chr2 223548173 223548201 -29708382 + AT_rich Low_complexity Low_complexity 1 28 0 2168 96 10 10 chr2 223548622 223548915 -29707668 - AluY SINE Alu -18 293 1 35 24 0 0 chr2 223548985 223549027 -29707556 + AT_rich Low_complexity Low_complexity 1 42 0 251 191 16 0 chr2 223550842 223550905 -29705678 + CT-rich Low_complexity Low_complexity 1 64 0 916 91 8 0 chr2 223551338 223551470 -29705113 - AluY SINE Alu 0 311 179 21 0 0 0 chr2 223552256 223552277 -29704306 + AT_rich Low_complexity Low_complexity 1 21 0 27 49 0 0 chr2 223552462 223552503 -29704080 + AT_rich Low_complexity Low_complexity 1 41 0 16460 34 2 0 chr2 223552876 223555621 -29700962 - L1PA3 LINE L1 -4 6151 3403 10212 34 0 0 chr2 223555621 223556877 -29699706 + L1P LINE L1 2002 3257 -2889 5716 127 55 16 chr2 223656887 223657824 -29598759 + Tigger1 DNA MER2_type 1445 2418 0 2289 123 0 0 chr2 223658079 223658388 -29598195 + AluSg SINE Alu 2 310 0 933 147 7 20 chr2 223658668 223658818 -29597765 - THE1C LTR MaLR -227 148 1 462 281 198 9 chr2 223660190 223660407 -29596176 - MIR SINE MIR 0 262 5 292 329 127 24 chr2 223660580 223660785 -29595798 - L2 LINE L2 -560 2754 2517 516 72 0 0 chr2 223660785 223660854 -29595729 + (TCTA)n Simple_repeat Simple_repeat 1 69 0 292 329 127 24 chr2 223660854 223660900 -29595683 - L2 LINE L2 -797 2517 2477 186 260 0 0 chr2 223660958 223661008 -29595575 + MIR SINE MIR 164 213 -49 350 288 68 40 chr2 223661064 223661241 -29595342 + MIR SINE MIR 77 258 -4 314 327 64 0 chr2 223661749 223661905 -29594678 - Tigger8 DNA MER2_type -397 269 104 25 31 0 0 chr2 223662602 223662634 -29593949 + AT_rich Low_complexity Low_complexity 1 32 0 2328 75 3 19 chr2 223662722 223663030 -29593553 - AluY SINE Alu -7 304 2 239 225 191 34 chr2 223663090 223663179 -29593404 - MER5A DNA MER1_type -78 111 9 198 250 21 0 chr2 223663386 223663434 -29593149 + MIR SINE MIR 97 145 -117 2515 91 5 23 chr2 223663436 223663879 -29592704 + L1P3 LINE L1 5008 5445 -727 6432 143 63 63 chr2 223663879 223665204 -29591379 + pTR5 LTR ERV1 743 2067 -371 5913 67 1 0 chr2 223665208 223665915 -29590668 + L1PA7 LINE L1 5442 6149 -5 2198 94 0 44 chr2 223665917 223666236 -29590347 + AluY SINE Alu 1 305 -6 1767 112 8 0 chr2 223666389 223666638 -29589945 - AluSq SINE Alu -62 251 1 905 183 20 0 chr2 223668136 223668289 -29588294 - MLT1A1 LTR MaLR -205 160 5 2468 87 3 0 chr2 223669735 223670046 -29586537 + AluSx SINE Alu 1 312 0 1603 183 31 3 chr2 223670274 223670563 -29586020 - AluJb SINE Alu -15 297 1 1938 233 40 39 chr2 223670695 223671189 -29585394 - LTR42 LTR ERVL 0 495 1 902 295 29 18 chr2 223671342 223671623 -29584960 + LTR16C LTR ERVL 104 387 -104 601 311 84 59 chr2 223672465 223673054 -29583529 - L2 LINE L2 -50 3263 2656 2187 106 0 3 chr2 223673081 223673389 -29583194 - AluSq SINE Alu 0 307 1 239 353 78 25 chr2 223673394 223673598 -29582985 - MLT1J2 LTR MaLR -35 415 201 595 208 25 8 chr2 223673647 223673767 -29582816 - MLT1J2 LTR MaLR -328 122 1 2603 58 0 6 chr2 223673834 223674147 -29582436 + AluY SINE Alu 1 311 0 1278 225 17 20 chr2 223675088 223675415 -29581168 + AluY SINE Alu 1 326 0 267 297 64 55 chr2 223675754 223675918 -29580665 + MIR SINE MIR 42 211 -51 2488 208 108 17 chr2 223676925 223677648 -29578935 - L1MCa LINE L1 -4754 1810 1022 2332 92 0 10 chr2 223677648 223677954 -29578629 - AluSq SINE Alu -10 303 1 2507 95 95 5 chr2 223677966 223678357 -29578226 - L1PA11 LINE L1 0 6174 5749 3381 125 1 175 chr2 223678357 223679275 -29577308 - L1PA11 LINE L1 -941 5205 4448 3189 121 23 0 chr2 223679273 223679813 -29576770 - L1P4 LINE L1 -421 5753 5204 * 1272 252 62 86 chr2 223679820 223680387 -29576196 - L1MCa LINE L1 -5492 553 1 895 180 34 46 chr2 223681408 223681647 -29574936 - MER106A DNA MER1_type 0 236 1 290 365 40 0 chr2 223681709 223681835 -29574748 + MIR SINE MIR 29 159 -103 682 304 59 65 chr2 223681838 223682282 -29574301 - MLT1J1 LTR MaLR -3 443 3 214 310 31 85 chr2 223682476 223682605 -29573978 - MIR3 SINE MIR -73 135 14 21 36 0 0 chr2 223682688 223682716 -29573867 + AT_rich Low_complexity Low_complexity 1 28 0 1964 118 22 0 chr2 223682789 223683061 -29573522 - AluSx SINE Alu -13 299 22 2194 107 0 3 chr2 223683201 223683500 -29573083 - AluSq SINE Alu -15 298 1 24 0 0 0 chr2 223683608 223683632 -29572951 + AT_rich Low_complexity Low_complexity 1 24 0 2655 32 0 3 chr2 223683971 223684282 -29572301 - AluY SINE Alu -1 310 1 982 162 27 27 chr2 223684699 223684884 -29571699 - Tigger7 DNA MER2_type -1 2486 2302 535 273 65 40 chr2 223685209 223685531 -29571052 + MLT1I LTR MaLR 1 370 -39 2031 136 3 0 chr2 223686094 223686395 -29570188 - AluSx SINE Alu -10 302 1 24 53 0 0 chr2 223686416 223686454 -29570129 + AT_rich Low_complexity Low_complexity 1 38 0 287 301 168 14 chr2 223687682 223687825 -29568758 - MIR SINE MIR -3 259 95 508 229 116 23 chr2 223688354 223688682 -29567901 - L1MEd LINE L1 -3795 2745 2421 374 241 52 148 chr2 223688966 223689038 -29567545 + L2 LINE L2 3051 3128 -185 2165 90 3 34 chr2 223689038 223689360 -29567223 - AluSq SINE Alu -1 312 1 374 241 52 148 chr2 223689360 223689412 -29567171 + L2 LINE L2 3128 3183 -130 2408 45 0 0 chr2 223689412 223689700 -29566883 - AluY SINE Alu -23 288 1 374 241 52 148 chr2 223689700 223689865 -29566718 + L2 LINE L2 3183 3313 0 338 272 89 35 chr2 223690046 223690426 -29566157 - L1MEd LINE L1 -4714 1826 1431 370 320 69 35 chr2 223690428 223690631 -29565952 - L1MEd LINE L1 -5351 1179 970 2288 110 0 0 chr2 223691740 223692040 -29564543 - AluSq SINE Alu -13 300 1 6092 160 43 21 chr2 223692812 223693023 -29563560 + Tigger3b DNA MER2_type 1 206 -2822 2261 103 0 3 chr2 223693023 223693325 -29563258 + AluSx SINE Alu 3 303 -9 6092 160 43 21 chr2 223693325 223694316 -29562267 + Tigger3b DNA MER2_type 206 1230 -1 2097 103 13 3 chr2 223695368 223695670 -29560913 + AluSc SINE Alu 5 309 0 29 84 0 0 chr2 223695736 223695807 -29560776 + AT_rich Low_complexity Low_complexity 1 71 0 23 0 0 0 chr2 223696962 223696985 -29559598 + AT_rich Low_complexity Low_complexity 1 23 0 29 60 0 0 chr2 223697597 223697647 -29558936 + AT_rich Low_complexity Low_complexity 1 50 0 2947 209 60 13 chr2 223697674 223698472 -29558111 - MER73 LTR ERVL 0 644 2 367 295 83 23 chr2 223698561 223698778 -29557805 - HAL1 LINE L1 -113 2394 2165 21 36 0 0 chr2 223698780 223698808 -29557775 + AT_rich Low_complexity Low_complexity 1 28 0 2408 69 0 10 chr2 223699505 223699809 -29556774 - AluY SINE Alu -10 301 1 208 300 83 0 chr2 223700628 223700688 -29555895 + MER5A DNA MER1_type 123 187 -2 22 80 0 0 chr2 223701101 223701151 -29555432 + AT_rich Low_complexity Low_complexity 1 50 0 310 347 111 6 chr2 223702075 223702336 -29554247 - L2 LINE L2 -33 3280 2455 189 228 35 35 chr2 223702507 223702564 -29554019 - MIR SINE MIR -112 96 40 1804 111 7 50 chr2 223702696 223702975 -29553608 + AluSx SINE Alu 1 267 -45 1526 224 80 19 chr2 223703468 223703982 -29552601 + L1 LINE L1 4229 4773 -1373 * 10798 191 72 37 chr2 223703970 223706253 -29550330 + L1MB1 LINE L1 5 2207 -4175 2050 136 0 3 chr2 223706253 223706554 -29550029 + AluSc SINE Alu 1 300 -9 10798 191 72 37 chr2 223706554 223707213 -29549370 + L1MB1 LINE L1 2207 2842 -3540 1357 226 82 40 chr2 223707213 223707593 -29548990 - MSTD LTR MaLR 0 396 1 10798 191 72 37 chr2 223707593 223708075 -29548508 + L1MB1 LINE L1 2842 3544 -2838 988 196 11 25 chr2 223708054 223708078 -29548505 + L1MB1 LINE L1 3898 3921 -2461 * 2284 89 3 19 chr2 223708078 223708394 -29548189 + AluY SINE Alu 1 311 0 988 196 11 25 chr2 223708394 223708644 -29547939 + L1MB1 LINE L1 3921 4168 -2214 1059 207 24 12 chr2 223708645 223708891 -29547692 + L1MB3 LINE L1 5933 6181 -2 2638 195 19 5 chr2 223708911 223709863 -29546720 + L1MB1 LINE L1 4999 5964 -440 1672 141 76 0 chr2 223709874 223710178 -29546405 + L1MB1 LINE L1 6078 6404 0 2134 89 0 11 chr2 223711582 223711888 -29544695 + AluSc SINE Alu 1 303 0 198 0 0 0 chr2 223712091 223712113 -29544470 + (TG)n Simple_repeat Simple_repeat 2 23 0 1148 215 45 0 chr2 223712639 223712904 -29543679 + L1MB7 LINE L1 5892 6168 -16 1140 239 129 19 chr2 223712946 223713515 -29543068 - MER76 LTR ERV 0 688 1 1155 189 161 23 chr2 223713884 223714144 -29542439 + AluJb SINE Alu 1 296 -6 252 0 0 0 chr2 223714154 223714182 -29542401 + (CA)n Simple_repeat Simple_repeat 1 28 0 213 365 83 35 chr2 223714307 223714452 -29542131 - L2 LINE L2 -17 3255 3104 830 346 109 46 chr2 223714802 223715697 -29540886 - L2 LINE L2 -578 2736 1785 299 268 65 16 chr2 223716131 223716254 -29540329 + LTR67 LTR ERVL 429 557 0 275 190 86 0 chr2 223716256 223716314 -29540269 - L1ME2 LINE L1 -26 6138 6076 1959 217 46 60 chr2 223716315 223716900 -29539683 - L1ME2 LINE L1 -52 6907 6331 6597 131 19 1 chr2 223716961 223718807 -29537776 - L1PA10 LINE L1 -5 6163 4291 487 135 14 0 chr2 223718807 223718881 -29537702 + 5S rRNA rRNA 15 89 -32 351 288 8 0 chr2 223718896 223719021 -29537562 - L1ME2 LINE L1 -1015 5926 5801 1126 248 145 9 chr2 223719023 223719450 -29537133 - L1ME2 LINE L1 -1255 5686 5202 384 243 89 12 chr2 223719525 223719694 -29536889 - L1ME2 LINE L1 -4943 1480 1299 454 198 9 0 chr2 223719856 223719962 -29536621 - L1MA5 LINE L1 -10 6290 6184 2110 121 7 7 chr2 223720049 223720354 -29536229 - AluSg1 SINE Alu -4 305 1 613 294 61 62 chr2 223720357 223720682 -29535901 - L1MCc LINE L1 -4887 1536 1358 1705 238 42 7 chr2 223720682 223721131 -29535452 - MLT1C LTR MaLR 0 467 3 613 294 61 62 chr2 223721131 223721497 -29535086 - L1MCc LINE L1 -5065 1358 993 259 307 59 35 chr2 223721575 223721777 -29534806 - L1MCc LINE L1 -6143 280 74 1954 208 18 36 chr2 223721792 223722240 -29534343 - L1MA10 LINE L1 -1 6333 5894 1731 246 43 29 chr2 223722573 223723065 -29533518 + MLT1D LTR MaLR 5 503 -2 2214 116 0 25 chr2 223723740 223723919 -29532664 - AluSx SINE Alu 0 312 143 2167 57 3 7 chr2 223723919 223724202 -29532381 - AluY SINE Alu -19 292 11 2214 116 0 25 chr2 223724202 223724342 -29532241 - AluSx SINE Alu -169 143 1 23 0 0 0 chr2 223725883 223725906 -29530677 + AT_rich Low_complexity Low_complexity 1 23 0 380 278 33 99 chr2 223726186 223726398 -29530185 - MLT1L LTR MaLR -417 198 1 234 91 0 0 chr2 223727063 223727096 -29529487 + (T)n Simple_repeat Simple_repeat 1 33 0 24 0 0 0 chr2 223728687 223728711 -29527872 + AT_rich Low_complexity Low_complexity 1 24 0 201 196 0 0 chr2 223728711 223728757 -29527826 + GA-rich Low_complexity Low_complexity 3 48 0 238 221 26 39 chr2 223729133 223729210 -29527373 - MIR SINE MIR -77 185 110 3199 14 0 0 chr2 223729427 223729792 -29526791 - L1HS LINE L1 -24 6131 5767 404 139 23 47 chr2 223729751 223729837 -29526746 + L1HS LINE L1 6072 6155 0 * 27 0 0 0 chr2 223730423 223730450 -29526133 + AT_rich Low_complexity Low_complexity 1 27 0 264 302 101 22 chr2 223730469 223730608 -29525975 + L3 LINE CR1 1425 1574 -3 240 35 0 0 chr2 223731130 223731159 -29525424 + (A)n Simple_repeat Simple_repeat 1 29 0 192 394 14 0 chr2 223731457 223731528 -29525055 + L2 LINE L2 3188 3259 -13 30 27 0 0 chr2 223731784 223731821 -29524762 + AT_rich Low_complexity Low_complexity 1 37 0 2083 90 28 7 chr2 223732237 223732525 -29524058 + AluSc SINE Alu 1 294 -15 1160 79 0 0 chr2 223733589 223733741 -29522842 + L1PA10 LINE L1 6016 6167 -1 26 30 0 0 chr2 223734128 223734161 -29522422 + AT_rich Low_complexity Low_complexity 1 33 0 312 332 27 11 chr2 223734183 223734370 -29522213 + L1MC/D LINE L1 5454 5643 -2165 30 27 0 0 chr2 223737036 223737073 -29519510 + AT_rich Low_complexity Low_complexity 1 37 0 181 310 78 39 chr2 223738946 223739075 -29517508 + L2 LINE L2 1275 1408 -1906 1217 111 0 0 chr2 223739083 223739254 -29517329 - AluSg/x SINE Alu -5 307 137 2220 89 3 3 chr2 223739437 223739728 -29516855 - AluSq SINE Alu -16 297 7 21 0 0 0 chr2 223740726 223740747 -29515836 + AT_rich Low_complexity Low_complexity 1 21 0 222 329 118 24 chr2 223741210 223741380 -29515203 - MIR SINE MIR -56 206 21 2487 143 41 5 chr2 223742075 223742488 -29514095 + MSTA LTR MaLR 1 428 0 3224 222 67 11 chr2 223742678 223743021 -29513562 - L1MB8 LINE L1 -24 6154 5832 6085 147 55 7 chr2 223743021 223744196 -29512387 + Tigger3b DNA MER2_type 1 1231 0 3224 222 67 11 chr2 223744196 223744698 -29511885 - L1MB8 LINE L1 -346 5832 5261 428 236 18 114 chr2 223744919 223745139 -29511444 + MLT1F LTR MaLR 1 199 -343 922 268 98 7 chr2 223745272 223745559 -29511024 + MLT1F LTR MaLR 230 542 0 434 321 77 7 chr2 223745572 223745945 -29510638 + MLT1F-int LTR MaLR 14 531 -840 286 274 91 54 chr2 223746180 223746366 -29510217 + MLT1F-int LTR MaLR 692 884 -487 376 264 43 128 chr2 223746556 223746931 -29509652 + MLT1F-int LTR MaLR 1023 1365 -6 301 308 63 28 chr2 223746932 223747075 -29509508 + MLT1F LTR MaLR 3 150 -392 1772 242 60 37 chr2 223747085 223747278 -29509305 - MLT1E2 LTR MaLR -1 625 438 243 0 0 0 chr2 223747278 223747305 -29509278 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1772 242 60 37 chr2 223747305 223747677 -29508906 - MLT1E2 LTR MaLR -188 438 47 252 333 23 0 chr2 223747762 223747849 -29508734 + (CATATA)n Simple_repeat Simple_repeat 3 91 0 242 306 24 0 chr2 223747851 223747936 -29508647 - L1MC4 LINE L1 -1339 6703 6617 * 314 250 0 22 chr2 223747909 223748001 -29508582 - L1MC4 LINE L1 -1339 6703 6614 935 274 128 15 chr2 223748014 223748342 -29508241 + MLT1F LTR MaLR 170 534 -8 393 306 71 46 chr2 223748615 223748896 -29507687 - L1 LINE L1 -3181 2965 2678 28 48 0 0 chr2 223749029 223749071 -29507512 + AT_rich Low_complexity Low_complexity 1 42 0 1709 201 45 21 chr2 223749246 223749580 -29507003 - MLT2D LTR ERVL -71 343 2 904 224 45 8 chr2 223749583 223749847 -29506736 - Charlie1 DNA MER1_type -29 2732 2459 288 168 42 53 chr2 223749865 223749960 -29506623 - L1MEc LINE L1 -2884 3331 3238 261 252 118 15 chr2 223750008 223750143 -29506440 - L1MEc LINE L1 -3091 3124 2976 917 145 14 1 chr2 223750194 223750410 -29506173 - L1M LINE L1 -743 5403 5207 2234 116 27 48 chr2 223750410 223750609 -29505974 - THE1B LTR MaLR 0 364 175 6797 55 12 0 chr2 223750609 223752041 -29504542 - L1PA7 LINE L1 0 6154 4704 2234 116 27 48 chr2 223752041 223752213 -29504370 - THE1B LTR MaLR -189 175 1 13217 194 18 57 chr2 223752213 223753901 -29502682 - L1P LINE L1 -935 5211 3714 2394 111 40 8 chr2 223753901 223754254 -29502329 + THE1B LTR MaLR 1 364 0 13217 194 18 57 chr2 223754254 223755876 -29500707 - L1P LINE L1 -2432 3714 2030 4100 199 15 1 chr2 223755966 223756693 -29499890 - L1PA13 LINE L1 -6049 738 2 4178 224 8 9 chr2 223756698 223758258 -29498325 - L1PA13 LINE L1 -3706 3878 2319 359 320 70 24 chr2 223759736 223760064 -29496519 - L1PA13 LINE L1 -7232 349 7 222 37 0 0 chr2 223760126 223760153 -29496430 + (CTTTG)n Simple_repeat Simple_repeat 3 29 0 225 223 29 48 chr2 223760153 223760256 -29496327 - L1MEc LINE L1 -3870 2345 2245 362 301 29 104 chr2 223760257 223760672 -29495911 - L1MEc LINE L1 -4104 2292 1909 1890 175 0 0 chr2 223760820 223761129 -29495454 - AluSx SINE Alu -3 309 1 190 341 144 0 chr2 223761210 223761342 -29495241 + MIR SINE MIR 99 249 -13 415 285 64 69 chr2 223761464 223761720 -29494863 - L1MEc LINE L1 -4862 1343 1087 1767 97 4 25 chr2 223761720 223761999 -29494584 - L1PB1 LINE L1 -1 6150 5878 415 285 64 69 chr2 223761999 223762349 -29494234 - L1MEc LINE L1 -5118 1087 740 1421 219 24 37 chr2 223762403 223762778 -29493805 - MLT1A2 LTR MaLR -4 370 1 24 0 0 0 chr2 223763359 223763383 -29493200 + AT_rich Low_complexity Low_complexity 1 24 0 186 43 0 0 chr2 223763556 223763579 -29493004 + (TTCTC)n Simple_repeat Simple_repeat 5 27 0 2015 90 17 31 chr2 223763580 223763869 -29492714 - AluSg SINE Alu -25 285 1 200 371 138 0 chr2 223764138 223764254 -29492329 - L2 LINE L2 0 3272 3141 351 0 0 0 chr2 223764382 223764421 -29492162 + (CA)n Simple_repeat Simple_repeat 2 40 0 2264 104 0 0 chr2 223764479 223764788 -29491795 - AluSx SINE Alu 0 312 4 860 296 76 9 chr2 223766348 223766689 -29489894 + LTR50 LTR ERVL 424 787 -8 468 0 0 0 chr2 223767625 223767677 -29488906 + (TA)n Simple_repeat Simple_repeat 2 53 0 1714 130 50 29 chr2 223767677 223767980 -29488603 - AluSg SINE Alu 0 309 1 378 0 0 0 chr2 223768427 223768469 -29488114 + (CA)n Simple_repeat Simple_repeat 2 43 0 345 349 139 0 chr2 223770041 223770213 -29486370 + MLT1J LTR MaLR 1 196 -315 2381 80 0 0 chr2 223770398 223770699 -29485884 + AluY SINE Alu 1 301 -10 1383 297 55 43 chr2 223771288 223772131 -29484452 - L2 LINE L2 -8 3305 2457 183 241 103 0 chr2 223773464 223773522 -29483061 + L2 LINE L2 3141 3204 -109 24 0 0 0 chr2 223773581 223773605 -29482978 + AT_rich Low_complexity Low_complexity 1 24 0 23 54 0 0 chr2 223773983 223774020 -29482563 + AT_rich Low_complexity Low_complexity 1 37 0 37 0 0 0 chr2 223774113 223774150 -29482433 + AT_rich Low_complexity Low_complexity 1 37 0 427 254 73 9 chr2 223774685 223774795 -29481788 - L2 LINE L2 -2 3311 3195 1146 231 20 34 chr2 223775780 223776074 -29480509 - AluJo SINE Alu -12 290 1 490 329 175 11 chr2 223776500 223776774 -29479809 + L2 LINE L2 74 392 -2922 183 129 0 0 chr2 223776916 223776947 -29479636 + (CA)n Simple_repeat Simple_repeat 2 32 0 243 329 0 24 chr2 223777012 223777094 -29479489 + L2 LINE L2 3230 3309 -4 1428 299 185 19 chr2 223777110 223777968 -29478615 + L2 LINE L2 460 1460 -1854 243 240 27 40 chr2 223778185 223778260 -29478323 - MLT1H LTR MaLR -372 177 104 1800 197 14 27 chr2 223778298 223778668 -29477915 + MLT1A1 LTR MaLR 1 365 0 2831 213 50 17 chr2 223778668 223779306 -29477277 + MLT1A1-int LTR MaLR 1 659 -1076 558 222 3 10 chr2 223779470 223779609 -29476974 + MLT1A1-int LTR MaLR 677 1020 -715 1791 248 31 25 chr2 223779688 223780168 -29476415 + MLT1A1-int LTR MaLR 1252 1734 -1 889 156 0 13 chr2 223780169 223780323 -29476260 + MLT1A1 LTR MaLR 1 152 -213 1361 113 0 20 chr2 223780328 223780523 -29476060 + AluSg/x SINE Alu 99 289 -23 341 130 0 0 chr2 223780590 223780644 -29475939 - MLT2A2 LTR ERVL 0 453 400 314 173 0 12 chr2 223780649 223780730 -29475853 + (TA)n Simple_repeat Simple_repeat 1 80 0 249 217 0 29 chr2 223780742 223780811 -29475772 + L1MC4 LINE L1 6613 6679 -1363 2858 83 23 8 chr2 223780811 223781209 -29475374 - MLT2A1 LTR ERVL -40 404 1 811 230 0 6 chr2 223781213 223781374 -29475209 + MLT1A1 LTR MaLR 215 374 0 2013 131 0 0 chr2 223781600 223781891 -29474692 - AluSg SINE Alu -19 291 1 3509 234 41 37 chr2 223781990 223783067 -29473516 - L1MD3 LINE L1 -12 7983 5258 865 76 93 0 chr2 223783633 223783751 -29472832 + AluSc SINE Alu 1 129 -180 626 137 41 14 chr2 223783754 223784108 -29472475 + (TA)n Simple_repeat Simple_repeat 1 363 0 306 232 11 53 chr2 223784109 223784204 -29472379 + L1MC4 LINE L1 6613 6703 -1339 268 187 13 13 chr2 223784208 223784283 -29472300 + (TATATG)n Simple_repeat Simple_repeat 4 78 0 306 0 0 0 chr2 223784283 223784317 -29472266 + (GA)n Simple_repeat Simple_repeat 2 35 0 1230 107 0 0 chr2 223784319 223784478 -29472105 + AluSg/x SINE Alu 134 292 -18 1253 244 7 28 chr2 223784521 223784812 -29471771 - MLT1A2 LTR MaLR 0 374 90 351 0 0 0 chr2 223786168 223786207 -29470376 + (TG)n Simple_repeat Simple_repeat 1 39 0 23 68 0 0 chr2 223786461 223786505 -29470078 + AT_rich Low_complexity Low_complexity 1 44 0 252 329 0 0 chr2 223788063 223788145 -29468438 + L2 LINE L2 3213 3294 -19 718 294 156 25 chr2 223788246 223788737 -29467846 + L2 LINE L2 2765 3313 0 243 0 0 0 chr2 223790449 223790476 -29466107 + (A)n Simple_repeat Simple_repeat 1 27 0 232 250 17 0 chr2 223790687 223790747 -29465836 + (TTCA)n Simple_repeat Simple_repeat 1 61 0 316 192 48 8 chr2 223791348 223791473 -29465110 + (TA)n Simple_repeat Simple_repeat 1 130 0 1610 212 46 0 chr2 223791741 223792133 -29464450 + L1M4 LINE L1 2567 2976 -3170 1021 215 36 48 chr2 223792137 223792495 -29464088 + L1M4 LINE L1 4282 4635 -1511 2327 151 9 62 chr2 223793901 223794350 -29462233 - Tigger2a DNA MER2_type -4 430 6 3756 62 8 0 chr2 223794564 223795046 -29461537 - L1PA7 LINE L1 -2 6152 5667 1535 266 72 63 chr2 223795376 223795417 -29461166 + MER20B DNA MER1_type 19 58 -725 306 0 0 0 chr2 223795417 223795451 -29461132 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 1535 266 72 63 chr2 223795451 223796141 -29460442 + MER20B DNA MER1_type 58 757 -26 2324 88 0 3 chr2 223800120 223800425 -29456158 - AluSg SINE Alu -6 304 1 1322 136 75 0 chr2 223801203 223801416 -29455167 + MER30 DNA MER1_type 2 230 0 181 347 0 0 chr2 223801467 223801516 -29455067 - L2 LINE L2 -71 3201 3153 2243 97 23 14 chr2 223801778 223802128 -29454455 + THE1A LTR MaLR 1 353 -2 11548 88 13 1 chr2 223802130 223803691 -29452892 + THE1A-int LTR MaLR 1 1580 0 1816 136 62 15 chr2 223803691 223804030 -29452553 + THE1A LTR MaLR 1 355 0 307 262 68 73 chr2 223804072 223804278 -29452305 - L2 LINE L2 -5 3308 3104 2004 151 34 25 chr2 223805418 223805776 -29450807 - THE1B LTR MaLR -1 363 3 2545 168 90 0 chr2 223806040 223806509 -29450074 - MLT2B1 LTR ERVL 0 520 10 636 292 72 0 chr2 223806536 223806731 -29449852 + MER63A DNA MER1_type 2 210 0 468 279 88 0 chr2 223806984 223807120 -29449463 + MIR SINE MIR 7 154 -108 2397 239 33 16 chr2 223807126 223807703 -29448880 + MER82 DNA MER2_type 3 589 -64 1250 191 47 75 chr2 223807703 223808440 -29448143 - MER67B LTR ERV1 0 543 3 353 230 14 0 chr2 223808440 223808509 -29448074 + MER82 DNA MER2_type 584 653 0 180 118 294 20 chr2 223808529 223808580 -29448003 + MIR SINE MIR 193 257 -5 21 89 0 0 chr2 223809244 223809300 -29447283 + AT_rich Low_complexity Low_complexity 1 56 0 203 119 24 24 chr2 223810043 223810085 -29446498 + GA-rich Low_complexity Low_complexity 4 45 0 781 191 0 0 chr2 223810871 223811002 -29445581 + FLAM_C SINE Alu 1 131 -2 653 266 74 80 chr2 223811030 223811981 -29444602 - L1ME LINE L1 -4621 1775 779 2196 114 0 0 chr2 223812020 223812318 -29444265 + AluSx SINE Alu 1 298 -14 288 371 61 27 chr2 223812768 223813097 -29443486 - L1ME LINE L1 -6023 373 34 24 32 0 0 chr2 223813621 223813652 -29442931 + AT_rich Low_complexity Low_complexity 1 31 0 239 271 161 8 chr2 223814128 223814246 -29442337 + HAL1b LINE L1 398 533 -815 487 257 207 41 chr2 223814349 223814692 -29441891 + HAL1b LINE L1 748 1147 -201 823 218 99 5 chr2 223814998 223815200 -29441383 - MER58A DNA MER1_type -3 221 1 285 307 88 13 chr2 223815527 223815710 -29440873 - MIR3 SINE MIR -10 198 1 429 138 0 0 chr2 223815766 223815846 -29440737 + (TA)n Simple_repeat Simple_repeat 1 80 0 2095 125 3 0 chr2 223815846 223816150 -29440433 - AluSx SINE Alu -5 307 3 1109 191 5 0 chr2 223816417 223816605 -29439978 - MER5A DNA MER1_type 0 189 1 321 249 35 178 chr2 223816613 223816764 -29439819 + MER5B DNA MER1_type 7 125 -53 1686 178 12 6 chr2 223816764 223817084 -29439499 - L1MA6 LINE L1 -8 6292 5971 321 249 35 178 chr2 223817084 223817129 -29439454 + MER5B DNA MER1_type 125 175 -3 3707 152 65 25 chr2 223818380 223818874 -29437709 - MER72 LTR ERV1 0 722 191 2149 129 3 0 chr2 223818874 223819184 -29437399 + AluSq SINE Alu 1 311 -2 3707 152 65 25 chr2 223819184 223819382 -29437201 - MER72 LTR ERV1 -531 191 2 329 296 113 46 chr2 223819655 223819708 -29436875 - L2 LINE L2 -1453 1861 1813 2303 106 31 14 chr2 223819708 223820066 -29436517 - THE1B LTR MaLR 0 364 1 329 296 113 46 chr2 223820066 223820252 -29436331 - L2 LINE L2 -1501 1813 1606 245 292 146 0 chr2 223823349 223823438 -29433145 - L2 LINE L2 -16 3256 3155 362 298 133 11 chr2 223823557 223823787 -29432796 - MIR SINE MIR -2 260 2 1484 251 130 48 chr2 223823848 223824830 -29431753 - Charlie7 DNA MER1_type -75 2537 1469 2178 121 42 17 chr2 223824830 223825185 -29431398 - THE1B LTR MaLR 0 364 1 1484 251 130 48 chr2 223825185 223825208 -29431375 - Charlie7 DNA MER1_type -1143 1469 1449 532 263 54 5 chr2 223825610 223825796 -29430787 + Charlie7 DNA MER1_type 1524 1718 -894 660 300 41 0 chr2 223825888 223826108 -29430475 + MIR SINE MIR 34 262 0 213 233 0 33 chr2 223826219 223826279 -29430304 + GA-rich Low_complexity Low_complexity 3 60 0 27 29 0 0 chr2 223827441 223827475 -29429108 + AT_rich Low_complexity Low_complexity 1 34 0 265 311 18 110 chr2 223828477 223828641 -29427942 + MIR SINE MIR 8 156 -106 214 143 41 0 chr2 223829765 223829814 -29426769 + (TA)n Simple_repeat Simple_repeat 1 51 0 414 279 63 84 chr2 223830769 223831083 -29425500 - L1MC4a LINE L1 -279 5885 5628 204 231 0 0 chr2 223832318 223832370 -29424213 + (TATG)n Simple_repeat Simple_repeat 4 55 0 891 271 97 51 chr2 223832434 223833156 -29423427 - L2 LINE L2 -2 3311 2545 2709 167 26 15 chr2 223833365 223833909 -29422674 - L1MA10 LINE L1 -8 6326 5777 582 231 9 6 chr2 223833916 223834079 -29422504 + L1ME LINE L1 5687 5850 -271 286 119 0 0 chr2 223834550 223834592 -29421991 - MSTA LTR MaLR 0 428 387 1217 25 82 0 chr2 223834592 223834750 -29421833 - L1P LINE L1 -5085 1061 891 3436 22 0 17 chr2 223834750 223835206 -29421377 + L1PA3 LINE L1 5747 6195 0 1864 138 130 19 chr2 223835206 223835567 -29421016 - MSTA LTR MaLR -27 401 1 418 261 103 12 chr2 223835583 223835748 -29420835 + LTR16C LTR ERVL 312 491 0 445 221 215 7 chr2 223836940 223837089 -29419494 - L2 LINE L2 -581 2733 2554 207 195 0 0 chr2 223837108 223837149 -29419434 + (TTCA)n Simple_repeat Simple_repeat 1 41 0 2604 209 72 42 chr2 223837150 223837936 -29418647 - L1MC4 LINE L1 -3 8039 7230 7192 191 124 28 chr2 223837936 223839535 -29417048 - MER52A LTR ERV1 0 1755 3 2553 250 92 25 chr2 223839536 223840567 -29416016 - L1MC4 LINE L1 -654 7234 6113 559 328 78 71 chr2 223840567 223841422 -29415161 - L1M4 LINE L1 -2999 3147 2283 450 0 0 0 chr2 223841422 223841472 -29415111 + (TG)n Simple_repeat Simple_repeat 2 51 0 559 328 78 71 chr2 223841472 223841608 -29414975 - L1M4 LINE L1 -3863 2283 2149 7154 28 6 0 chr2 223842106 223842952 -29413631 - L1PA4 LINE L1 -2 6153 5303 1766 28 0 0 chr2 223842951 223843165 -29413418 + L1PA4 LINE L1 5085 5298 -848 * 2845 151 16 18 chr2 223843331 223843842 -29412741 - LTR8A LTR ERV1 -55 672 163 2608 78 31 18 chr2 223843853 223844236 -29412347 - L1PA13 LINE L1 -3 6160 5773 513 314 40 100 chr2 223844236 223844777 -29411806 - HAL1b LINE L1 -930 418 53 230 163 23 23 chr2 223845433 223845519 -29411064 + (TA)n Simple_repeat Simple_repeat 2 87 0 238 143 20 0 chr2 223845525 223845574 -29411009 + LTR66 LTR ERVL 389 438 -172 1174 138 0 43 chr2 223845633 223845821 -29410762 - AluSg/x SINE Alu -2 310 131 501 92 13 0 chr2 223845876 223845952 -29410631 - MADE1 DNA Mariner 0 80 4 317 43 21 0 chr2 223845980 223846027 -29410556 + (CAA)n Simple_repeat Simple_repeat 2 49 0 260 242 30 20 chr2 223847376 223847475 -29409108 + (TA)n Simple_repeat Simple_repeat 1 100 0 6355 178 18 5 chr2 223848019 223849142 -29407441 + L1MA3 LINE L1 10 1147 -6418 7359 172 38 15 chr2 223849159 223852407 -29404176 + L1MA3 LINE L1 4299 7724 0 237 178 0 0 chr2 223852469 223852514 -29404069 + CT-rich Low_complexity Low_complexity 1 45 0 1264 156 15 0 chr2 223852516 223852715 -29403868 - AluJo SINE Alu -33 279 78 230 314 57 50 chr2 223853799 223853958 -29402625 - MER5A DNA MER1_type -28 161 2 337 286 91 11 chr2 223856591 223856766 -29399817 + L3b LINE CR1 1125 1313 -270 330 281 102 31 chr2 223857269 223857397 -29399186 - MIR SINE MIR -125 137 1 2035 97 0 55 chr2 223857557 223857867 -29398716 - AluSq SINE Alu -20 293 1 312 27 0 0 chr2 223859838 223859875 -29396708 + (CA)n Simple_repeat Simple_repeat 2 38 0 186 43 0 0 chr2 223859876 223859899 -29396684 + (GA)n Simple_repeat Simple_repeat 2 24 0 14109 127 41 17 chr2 223859909 223862270 -29394313 - Tigger1 DNA MER2_type -1 2417 1 863 100 0 0 chr2 223862624 223862734 -29393849 + AluSg/x SINE Alu 171 280 -30 663 78 0 0 chr2 223862744 223862834 -29393749 + (TA)n Simple_repeat Simple_repeat 1 90 0 387 345 94 15 chr2 223863884 223864287 -29392296 + L1M4 LINE L1 4178 4612 -1534 22 56 0 0 chr2 223864398 223864434 -29392149 + AT_rich Low_complexity Low_complexity 1 36 0 1031 260 171 84 chr2 223864447 223864918 -29391665 + L1MEc LINE L1 112 663 -5733 2015 172 61 15 chr2 223864918 223865314 -29391269 - MLT2D LTR ERVL 0 414 1 1031 260 171 84 chr2 223865314 223865534 -29391049 + L1MEc LINE L1 663 863 -5533 357 24 0 0 chr2 223865539 223865581 -29391002 + (CA)n Simple_repeat Simple_repeat 1 42 0 1030 274 162 74 chr2 223865616 223865695 -29390888 + L2 LINE L2 2282 2353 -961 2260 113 3 0 chr2 223865695 223866006 -29390577 + AluSx SINE Alu 1 312 0 1030 274 162 74 chr2 223866006 223866448 -29390135 + L2 LINE L2 2353 2866 -448 859 194 86 57 chr2 223866448 223866763 -29389820 - MER33 DNA MER1_type 0 324 1 1030 274 162 74 chr2 223866763 223866845 -29389738 + L2 LINE L2 2866 2939 -375 1401 156 52 99 chr2 223866857 223867222 -29389361 - MLT1A1 LTR MaLR -17 348 1 651 275 203 19 chr2 223867224 223867544 -29389039 + L2 LINE L2 2933 3311 -2 21 71 0 0 chr2 223867828 223867870 -29388713 + AT_rich Low_complexity Low_complexity 1 42 0 30 83 0 0 chr2 223868480 223868552 -29388031 + AT_rich Low_complexity Low_complexity 1 72 0 575 343 9 19 chr2 223868569 223868782 -29387801 - MIR SINE MIR -42 220 10 262 242 16 0 chr2 223868921 223868983 -29387600 + L2 LINE L2 3250 3312 -1 515 319 123 28 chr2 223873543 223874016 -29382567 - L1M4 LINE L1 -747 5399 4882 321 239 105 82 chr2 223874183 223874439 -29382144 - L1M4 LINE L1 -2225 3921 3663 21 36 0 0 chr2 223876335 223876363 -29380220 + AT_rich Low_complexity Low_complexity 1 28 0 2195 274 47 25 chr2 223876586 223876783 -29379800 + L1ME3A LINE L1 4282 4473 -1691 2328 91 3 3 chr2 223876783 223877092 -29379491 - AluSc SINE Alu 0 309 1 2195 274 47 25 chr2 223877092 223877490 -29379093 + L1ME3A LINE L1 4473 4861 -1303 1415 213 33 25 chr2 223877490 223877852 -29378731 + MLT1A1 LTR MaLR 1 365 0 2195 274 47 25 chr2 223877852 223878466 -29378117 + L1ME3A LINE L1 4861 5515 -649 438 249 33 39 chr2 223878472 223878653 -29377930 + L1ME3A LINE L1 5691 5870 -292 251 304 124 10 chr2 223878666 223878867 -29377716 - L1M4 LINE L1 -863 5283 5060 412 254 177 26 chr2 223878909 223879141 -29377442 + L1ME3A LINE L1 5896 6162 -8 465 34 0 0 chr2 223880071 223880130 -29376453 + (TG)n Simple_repeat Simple_repeat 2 60 0 22 0 0 0 chr2 223880714 223880736 -29375847 + AT_rich Low_complexity Low_complexity 1 22 0 1672 155 78 11 chr2 223881828 223882112 -29374471 + AluJb SINE Alu 1 303 -9 280 304 61 109 chr2 223883488 223883718 -29372865 + MIR SINE MIR 20 238 -24 2514 53 0 37 chr2 223883874 223884197 -29372386 + AluY SINE Alu 1 311 0 540 201 165 30 chr2 223884399 223884563 -29372020 - MER5A DNA MER1_type -3 186 1 212 222 61 0 chr2 223884603 223884702 -29371881 + (TA)n Simple_repeat Simple_repeat 1 105 0 1830 187 50 50 chr2 223884836 223885301 -29371282 + MLT1C LTR MaLR 1 465 -2 551 234 62 23 chr2 223886170 223886298 -29370285 - MER5B DNA MER1_type 0 178 46 724 126 31 8 chr2 223887246 223887373 -29369210 - L1PA16 LINE L1 -10 6156 6027 317 293 86 21 chr2 223888361 223888501 -29368082 - L2 LINE L2 -19 3294 3146 1038 160 0 37 chr2 223888778 223888966 -29367617 + AluSg/x SINE Alu 132 312 0 1858 142 77 14 chr2 223889931 223890284 -29366299 + THE1C LTR MaLR 1 375 0 282 220 0 17 chr2 223890977 223891036 -29365547 - L2 LINE L2 0 3313 3256 22 0 0 0 chr2 223891488 223891510 -29365073 + AT_rich Low_complexity Low_complexity 1 22 0 337 327 52 37 chr2 223892168 223892572 -29364011 + L1ME LINE L1 3390 3799 -2347 218 263 105 0 chr2 223892686 223892762 -29363821 + L2 LINE L2 3211 3294 -19 302 356 15 0 chr2 223892853 223892988 -29363595 + L1ME LINE L1 5548 5684 -437 312 364 87 46 chr2 223893022 223893481 -29363102 + L2 LINE L2 2103 2580 -734 197 182 18 0 chr2 223893746 223893801 -29362782 + GA-rich Low_complexity Low_complexity 2 57 0 23 54 0 0 chr2 223893829 223893866 -29362717 + AT_rich Low_complexity Low_complexity 1 37 0 265 371 95 55 chr2 223894205 223894458 -29362125 + L2 LINE L2 3000 3262 -10 813 263 21 53 chr2 223894752 223894995 -29361588 - MIR SINE MIR 0 262 28 266 266 9 53 chr2 223895042 223895155 -29361428 + MIR SINE MIR 155 262 0 500 317 110 8 chr2 223895541 223896046 -29360537 - L1MC4a LINE L1 -721 5453 5318 219 36 0 0 chr2 223896052 223896080 -29360503 + (TA)n Simple_repeat Simple_repeat 2 29 0 1020 251 163 6 chr2 223896225 223896816 -29359767 + LTR50 LTR ERVL 3 770 -25 275 230 11 0 chr2 223897040 223897127 -29359456 + (TG)n Simple_repeat Simple_repeat 1 88 0 448 244 157 0 chr2 223897273 223897388 -29359195 - MER58B DNA MER1_type 0 341 209 319 280 0 0 chr2 223897534 223897609 -29358974 + MER5A DNA MER1_type 10 84 -105 770 265 0 0 chr2 223897611 223897777 -29358806 - MER63A DNA MER1_type 0 210 45 296 209 238 57 chr2 223897802 223897907 -29358676 + MER5A DNA MER1_type 66 189 0 186 346 87 10 chr2 223897921 223898025 -29358558 - MER5A DNA MER1_type -6 183 72 * 248 286 24 119 chr2 223897936 223898104 -29358479 + MER5A DNA MER1_type 38 189 0 728 219 69 127 chr2 223898156 223898549 -29358034 + MLT1B-int LTR MaLR 973 1342 -29 648 167 49 0 chr2 223899278 223899422 -29357161 + L1MB1 LINE L1 6017 6167 -1 195 42 0 0 chr2 223901219 223901243 -29355340 + (TG)n Simple_repeat Simple_repeat 1 24 0 190 303 41 74 chr2 223901243 223901365 -29355218 - L2 LINE L2 -3 3310 3193 925 262 80 0 chr2 223901381 223901618 -29354965 - MIR SINE MIR -2 260 5 2232 167 19 3 chr2 223901857 223902235 -29354348 + MLT1B LTR MaLR 7 390 0 193 302 151 22 chr2 223902861 223903000 -29353583 + MIR SINE MIR 68 224 -38 573 299 18 0 chr2 223903346 223903510 -29353073 + L1ME3 LINE L1 5987 6153 -9 2009 118 79 25 chr2 223903511 223903867 -29352716 + THE1C LTR MaLR 1 375 0 3111 117 12 18 chr2 223903942 223904437 -29352146 - L1PA15 LINE L1 -6 6159 5668 446 303 73 91 chr2 223904801 223905197 -29351386 - MLT1I LTR MaLR -4 405 17 576 287 124 15 chr2 223905234 223905436 -29351147 + MIR SINE MIR 28 251 -11 192 303 112 21 chr2 223905727 223905915 -29350668 - L2 LINE L2 -5 3308 3104 1429 248 102 64 chr2 223906208 223906907 -29349676 - MER50 LTR ERV1 0 734 10 444 185 241 0 chr2 223906913 223907021 -29349562 - MLT1J2 LTR MaLR -315 135 2 268 329 119 0 chr2 223907075 223907218 -29349365 - L2 LINE L2 -277 3036 2877 354 129 0 0 chr2 223907484 223907546 -29349037 + (GA)n Simple_repeat Simple_repeat 1 62 0 483 297 97 22 chr2 223907768 223908172 -29348411 - L2 LINE L2 -438 2876 2443 720 305 137 21 chr2 223908302 223908768 -29347815 - LTR33 LTR ERVL 0 521 2 213 341 22 0 chr2 223908787 223908878 -29347705 - L2 LINE L2 -1012 2302 2210 770 289 25 21 chr2 223908889 223909124 -29347459 - MIR SINE MIR -2 260 25 488 310 23 0 chr2 223910343 223910472 -29346111 + L2 LINE L2 2848 2979 -334 526 297 50 71 chr2 223910531 223910911 -29345672 + L2 LINE L2 2942 3313 0 23 0 0 0 chr2 223911256 223911279 -29345304 + AT_rich Low_complexity Low_complexity 1 23 0 411 38 0 0 chr2 223911997 223912050 -29344533 + (CA)n Simple_repeat Simple_repeat 1 53 0 243 315 136 40 chr2 223912338 223912455 -29344128 + L3b LINE CR1 1296 1400 -183 1587 174 121 14 chr2 223912455 223912811 -29343772 + MSTD LTR MaLR 3 396 0 243 315 136 40 chr2 223912811 223912944 -29343639 + L3b LINE CR1 1400 1570 -13 8809 70 9 1 chr2 223913699 223915639 -29340944 - L1PA6 LINE L1 -2 6152 4196 18291 109 25 20 chr2 223915639 223918496 -29338087 - L1PA6 LINE L1 -3266 2880 11 23 54 0 0 chr2 223918625 223918662 -29337921 + AT_rich Low_complexity Low_complexity 1 37 0 769 352 51 42 chr2 223919123 223919156 -29337427 + L1M3a LINE L1 11 42 -5913 2125 130 0 3 chr2 223919156 223919455 -29337128 + AluSc SINE Alu 3 300 -9 769 352 51 42 chr2 223919455 223920103 -29336480 + L1M3a LINE L1 42 698 -5257 1927 274 30 5 chr2 223920318 223920912 -29335671 + L1 LINE L1 345 953 -5081 6293 162 28 13 chr2 223920928 223921957 -29334626 + L1 LINE L1 4927 5978 -1587 2384 117 22 3 chr2 223921957 223922325 -29334258 - THE1C LTR MaLR 0 375 1 6293 162 28 13 chr2 223922325 223922523 -29334060 + L1 LINE L1 5978 6172 -1393 799 162 39 0 chr2 223922523 223922677 -29333906 + L1MA6 LINE L1 6141 6300 0 236 240 27 13 chr2 223923339 223923414 -29333169 - HAL1 LINE L1 -814 1693 1618 401 268 91 57 chr2 223923579 223923930 -29332653 - L1MEd LINE L1 -4862 1343 981 374 348 125 20 chr2 223924234 223924579 -29332004 + L2 LINE L2 2057 2437 -877 256 299 321 0 chr2 223925030 223925167 -29331416 + MIR SINE MIR 53 233 -29 183 156 0 0 chr2 223925174 223925206 -29331377 + (CTA)n Simple_repeat Simple_repeat 1 32 0 1564 171 65 15 chr2 223925211 223925550 -29331033 + MER46B DNA MER2_type 6 236 0 22 35 0 0 chr2 223926447 223926476 -29330107 + AT_rich Low_complexity Low_complexity 1 29 0 329 316 161 44 chr2 223927065 223927451 -29329132 - L2 LINE L2 -29 3284 2854 23 33 0 0 chr2 223927728 223927758 -29328825 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr2 223927810 223927840 -29328743 + AT_rich Low_complexity Low_complexity 1 30 0 2789 191 80 30 chr2 223929251 223929545 -29327038 - MER39 LTR ERV1 -1 706 428 645 14 0 0 chr2 223929545 223929619 -29326964 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 2789 191 80 30 chr2 223929619 223929996 -29326587 - MER39 LTR ERV1 -279 428 1 265 233 198 35 chr2 223932182 223932298 -29324285 + MIR SINE MIR 26 160 -102 2287 252 42 44 chr2 223932310 223933057 -29323526 - L1MEd LINE L1 -5608 788 44 207 419 37 7 chr2 223933192 223933328 -29323255 + MIR3 SINE MIR 42 181 -27 1694 224 138 31 chr2 223933523 223934009 -29322574 - MER101B LTR ERV1 -32 538 1 1187 186 22 13 chr2 223934723 223934949 -29321634 + AluJo SINE Alu 75 302 -10 3667 139 53 9 chr2 223935038 223935683 -29320900 + L1MC1 LINE L1 5661 6333 0 334 247 24 24 chr2 223935851 223935936 -29320647 + MER3 DNA MER1_type 1 85 -124 * 570 207 41 0 chr2 223935904 223936025 -29320558 - MER3 DNA MER1_type -6 203 78 2235 87 3 3 chr2 223936380 223936680 -29319903 + AluSp SINE Alu 14 313 0 758 253 41 21 chr2 223936721 223936915 -29319668 - MER20 DNA MER1_type -15 204 7 1913 138 34 3 chr2 223936941 223937239 -29319344 + AluSx SINE Alu 1 307 -5 412 353 65 7 chr2 223937361 223937636 -29318947 - L2 LINE L2 -828 2486 2196 498 259 237 39 chr2 223937776 223938139 -29318444 + L2 LINE L2 2878 3312 -1 1315 162 8 39 chr2 223939045 223939279 -29317304 + MSTB1 LTR MaLR 7 233 -199 864 112 28 14 chr2 223939294 223939437 -29317146 + MSTB1 LTR MaLR 204 348 -84 1822 185 32 49 chr2 223939441 223939852 -29316731 - MSTB1 LTR MaLR -28 404 1 450 308 63 0 chr2 223939855 223940014 -29316569 + MIR SINE MIR 50 218 -44 223 273 25 8 chr2 223940890 223941011 -29315572 + (TA)n Simple_repeat Simple_repeat 1 123 0 454 314 14 21 chr2 223941175 223941315 -29315268 + MIR SINE MIR 3 141 -121 818 305 32 76 chr2 223941554 223942121 -29314462 - MER34 LTR ERV1 0 542 1 354 287 128 62 chr2 223942812 223943202 -29313381 - L1MEd LINE L1 -2774 3355 2940 525 172 21 65 chr2 223943225 223943412 -29313171 + MER4E LTR ERV1 1 284 -615 * 1619 223 11 11 chr2 223943408 223943758 -29312825 + MER4D LTR ERV1 547 896 -7 311 246 112 52 chr2 223943825 223943959 -29312624 - L1MEd LINE L1 -3279 2850 2709 189 107 0 0 chr2 223944652 223944680 -29311903 + (TTAGGG)n Simple_repeat Simple_repeat 5 32 0 2116 123 0 0 chr2 223944746 223945046 -29311537 + AluSg SINE Alu 3 302 -8 509 326 42 37 chr2 223945205 223945719 -29310864 - L1MEd LINE L1 -898 1592 978 532 239 44 112 chr2 223946651 223946902 -29309681 + MIR SINE MIR 29 262 0 294 278 65 46 chr2 223947231 223947339 -29309244 - L2 LINE L2 0 3313 3204 1439 212 40 0 chr2 223947435 223947709 -29308874 + AluJo SINE Alu 3 287 -25 234 259 98 54 chr2 223948025 223948137 -29308446 - L2 LINE L2 0 3313 3197 34 24 0 0 chr2 223948653 223948694 -29307889 + AT_rich Low_complexity Low_complexity 1 41 0 244 307 70 70 chr2 223949408 223949522 -29307061 - L2 LINE L2 0 3313 3200 228 259 19 19 chr2 223950104 223950158 -29306425 - L2 LINE L2 -10 3262 3209 2316 90 0 7 chr2 223950276 223950575 -29306008 + AluY SINE Alu 1 297 -14 230 274 0 0 chr2 223950705 223950756 -29305827 + MIR SINE MIR 203 253 -9 262 312 183 0 chr2 223951758 223951851 -29304732 + L2 LINE L2 3153 3262 -10 23 54 0 0 chr2 223952442 223952479 -29304104 + AT_rich Low_complexity Low_complexity 1 37 0 221 182 0 23 chr2 223952578 223952622 -29303961 + (TATATG)n Simple_repeat Simple_repeat 6 48 0 234 184 0 0 chr2 223952622 223952671 -29303912 + LTR66 LTR ERVL 394 442 -168 195 42 0 0 chr2 223952939 223952963 -29303620 + (CATTA)n Simple_repeat Simple_repeat 2 25 0 7818 64 6 4 chr2 223956086 223957091 -29299492 - LTR13 LTR ERVK 0 1007 1 294 373 27 13 chr2 223958202 223958352 -29298231 + MIR SINE MIR 2 153 -109 1503 251 69 36 chr2 223958359 223958881 -29297702 + L1MEc LINE L1 36 574 -5822 888 179 41 101 chr2 223958892 223959066 -29297517 + MER58A DNA MER1_type 5 165 -2255 718 198 0 0 chr2 223959066 223959192 -29297391 - FLAM_A SINE Alu -5 128 3 888 179 41 101 chr2 223959192 223959235 -29297348 + MER58A DNA MER1_type 165 209 -15 572 288 63 11 chr2 223959349 223959540 -29297043 - MIR SINE MIR -60 202 2 188 246 51 93 chr2 223959709 223959827 -29296756 + L3 LINE CR1 1210 1322 -255 270 279 38 25 chr2 223959875 223959954 -29296629 - MIR SINE MIR -73 189 110 1193 219 19 64 chr2 223960055 223960366 -29296217 + AluJo SINE Alu 1 297 -5 449 304 61 12 chr2 223961302 223961549 -29295034 - MARNA DNA Mariner -23 563 305 272 299 13 0 chr2 223961631 223961708 -29294875 + MIR3 SINE MIR 85 162 -46 29 28 0 0 chr2 223961905 223961941 -29294642 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr2 223962064 223962085 -29294498 + AT_rich Low_complexity Low_complexity 1 21 0 340 267 23 0 chr2 223963497 223963583 -29293000 - L2 LINE L2 -1 3271 3184 4381 99 2 0 chr2 223964572 223965176 -29291407 - L1PA10 LINE L1 -226 5942 5338 1640 92 0 4 chr2 223965176 223965401 -29291182 + L1PA10 LINE L1 5933 6159 -9 37 0 0 0 chr2 223965404 223965441 -29291142 + AT_rich Low_complexity Low_complexity 1 37 0 323 284 99 5 chr2 223966672 223966883 -29289700 - L1M4 LINE L1 -3645 2501 2271 307 113 23 0 chr2 223967020 223967078 -29289505 - MLT2D LTR ERVL 0 414 366 261 163 0 0 chr2 223967078 223967127 -29289456 + (TG)n Simple_repeat Simple_repeat 2 50 0 245 133 0 0 chr2 223967127 223967172 -29289411 + LTR66 LTR ERVL 394 438 -172 1847 172 11 79 chr2 223967177 223967195 -29289388 - MLT2D LTR ERVL -40 480 462 231 36 0 0 chr2 223967195 223967223 -29289360 + (GA)n Simple_repeat Simple_repeat 2 29 0 1847 172 11 79 chr2 223967223 223967614 -29288969 - MLT2D LTR ERVL -58 462 1 792 314 43 73 chr2 223967676 223968115 -29288468 - L2 LINE L2 -36 3277 2852 333 0 0 0 chr2 223969027 223969064 -29287519 + (T)n Simple_repeat Simple_repeat 1 37 0 236 299 11 0 chr2 223969561 223969648 -29286935 + L1ME LINE L1 5731 5818 -303 753 280 120 39 chr2 223969785 223970267 -29286316 + LTR33 LTR ERVL 1 521 0 407 287 66 8 chr2 223971397 223971519 -29285064 + MIR SINE MIR 1 129 -133 2059 143 3 7 chr2 223971537 223971844 -29284739 - AluSx SINE Alu -1 311 6 301 252 78 19 chr2 223971849 223971952 -29284631 + MIR SINE MIR 98 206 -56 215 122 0 24 chr2 223972038 223972079 -29284504 + (CA)n Simple_repeat Simple_repeat 1 40 0 334 307 133 12 chr2 223972082 223972248 -29284335 - L2 LINE L2 -177 3136 2951 23 0 0 0 chr2 223973596 223973619 -29282964 + AT_rich Low_complexity Low_complexity 1 23 0 366 276 16 31 chr2 223973729 223973856 -29282727 + (CATATA)n Simple_repeat Simple_repeat 2 126 0 41 0 0 0 chr2 223973858 223973899 -29282684 + AT_rich Low_complexity Low_complexity 1 41 0 393 259 116 21 chr2 223975433 223975622 -29280961 - L1MA8 LINE L1 -25 6266 6060 7432 31 6 0 chr2 223975655 223977086 -29279497 - L1PA3 LINE L1 -3 6152 4723 8398 29 0 4 chr2 223977086 223978091 -29278492 + L1P LINE L1 3443 4443 -1703 615 281 109 9 chr2 223978135 223978356 -29278227 - MLT1J1 LTR MaLR -1 445 203 510 187 0 0 chr2 223978754 223978904 -29277679 + (TA)n Simple_repeat Simple_repeat 2 151 0 204 385 90 0 chr2 223980773 223980895 -29275688 + L2 LINE L2 2423 2555 -759 21 0 0 0 chr2 223981339 223981360 -29275223 + AT_rich Low_complexity Low_complexity 1 21 0 311 256 34 77 chr2 223981427 223981544 -29275039 - L1MC4 LINE L1 -1317 6725 6614 234 0 0 0 chr2 223981544 223981570 -29275013 + (TA)n Simple_repeat Simple_repeat 2 27 0 21 0 0 0 chr2 223983359 223983380 -29273203 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr2 223984631 223984661 -29271922 + AT_rich Low_complexity Low_complexity 1 30 0 218 105 26 0 chr2 223985694 223985732 -29270851 + (TA)n Simple_repeat Simple_repeat 2 40 0 221 229 62 0 chr2 223986530 223986578 -29270005 + L2 LINE L2 3263 3313 0 283 246 14 0 chr2 223987138 223987207 -29269376 - MLT1J LTR MaLR -330 181 112 343 274 60 0 chr2 223987585 223987669 -29268914 - MER5C DNA MER1_type -220 104 16 28 0 0 0 chr2 223987800 223987828 -29268755 + AT_rich Low_complexity Low_complexity 1 28 0 350 311 0 0 chr2 223988794 223988900 -29267683 + MIR SINE MIR 156 261 -1 481 299 39 70 chr2 223989349 223989633 -29266950 + L2 LINE L2 3037 3311 -2 2135 125 0 13 chr2 223990309 223990621 -29265962 - AluSx SINE Alu -4 308 1 183 247 68 41 chr2 223991887 223991960 -29264623 - MIR SINE MIR -8 254 180 251 272 97 9 chr2 223993921 223994035 -29262548 - Charlie2 DNA MER1_type 0 2862 2739 1309 191 90 26 chr2 223994142 223994487 -29262096 + MLT1A2 LTR MaLR 8 374 0 646 171 132 0 chr2 223994492 223994644 -29261939 - Charlie2a DNA MER1_type -1202 1660 1489 295 273 23 11 chr2 223994782 223994870 -29261713 - Charlie2b DNA MER1_type -2138 644 556 375 296 84 47 chr2 223994923 223994988 -29261595 - Charlie2b DNA MER1_type -2557 225 164 2014 154 0 3 chr2 223994988 223995300 -29261283 + AluSx SINE Alu 1 311 -1 375 296 84 47 chr2 223995300 223995447 -29261136 - Charlie2b DNA MER1_type -2618 164 5 184 309 0 18 chr2 223995463 223995518 -29261065 - MER5A DNA MER1_type -48 141 88 1005 259 61 64 chr2 223996410 223996866 -29259717 - LTR16A1 LTR ERVL 0 457 3 267 31 0 0 chr2 223996953 223996985 -29259598 + (TG)n Simple_repeat Simple_repeat 1 32 0 * 324 0 0 0 chr2 223996984 223997020 -29259563 + (GA)n Simple_repeat Simple_repeat 1 36 0 345 284 172 0 chr2 223997102 223997271 -29259312 + MIR SINE MIR 65 262 0 194 326 63 40 chr2 223998129 223998304 -29258279 - MIR SINE MIR -65 197 19 564 363 93 38 chr2 223998429 223998826 -29257757 - L2 LINE L2 -2 3270 2852 310 21 43 0 chr2 223998846 223998893 -29257690 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 886 310 78 52 chr2 223998919 223999536 -29257047 - L2 LINE L2 -575 2739 2107 26 30 0 0 chr2 224001413 224001446 -29255137 + AT_rich Low_complexity Low_complexity 1 33 0 8142 157 15 11 chr2 224001656 224004111 -29252472 - L1PB2 LINE L1 -2 6149 3685 574 197 0 8 chr2 224004125 224004242 -29252341 + AluSg/x SINE Alu 178 293 -19 24 32 0 0 chr2 224004850 224004881 -29251702 + AT_rich Low_complexity Low_complexity 1 31 0 1822 183 3 3 chr2 224005367 224005703 -29250880 - AluJb SINE Alu 0 336 1 5734 98 28 45 chr2 224006856 224008504 -29248079 + L1PBa LINE L1 1 1862 -5001 2090 121 24 0 chr2 224008504 224008801 -29247782 + AluSx SINE Alu 1 304 -8 5734 98 28 45 chr2 224008801 224008915 -29247668 + L1PBa LINE L1 1862 1976 -4887 5247 144 17 20 chr2 224009279 224009471 -29247112 - L1MA4 LINE L1 -5 6295 6104 1748 114 63 11 chr2 224009471 224009742 -29246841 + AluSc SINE Alu 1 285 -24 5247 144 17 20 chr2 224009742 224010468 -29246115 - L1MA4 LINE L1 -196 6104 5379 2063 206 35 62 chr2 224011157 224011724 -29244859 + MLT2B3 LTR ERVL 3 554 0 968 145 17 0 chr2 224011860 224012032 -29244551 + HERVL-B3 LTR ERVL 25 199 -5455 867 226 66 74 chr2 224012113 224012197 -29244386 + MIR SINE MIR 6 89 -173 931 45 76 23 chr2 224012197 224012329 -29244254 + MER85 DNA T2_type 1 139 0 867 226 66 74 chr2 224012329 224012487 -29244096 + MIR SINE MIR 89 246 -16 938 134 85 40 chr2 224013792 224013993 -29242590 + Tigger2 DNA MER2_type 1 210 -2508 495 245 122 7 chr2 224013992 224014131 -29242452 + Tigger2 DNA MER2_type 2554 2708 -10 * 225 154 0 0 chr2 224014376 224014415 -29242168 + (CA)n Simple_repeat Simple_repeat 2 40 0 259 308 39 0 chr2 224014767 224014845 -29241738 + MER5B DNA MER1_type 16 96 -82 183 336 68 48 chr2 224014777 224014923 -29241660 - MER5A DNA MER1_type -25 164 16 * 716 292 158 37 chr2 224015330 224016087 -29240496 + L2 LINE L2 2376 3214 -99 308 265 0 12 chr2 224016290 224016373 -29240210 + MLT1K LTR MaLR 505 586 -2 580 192 186 26 chr2 224017077 224017233 -29239350 - MER20 DNA MER1_type -6 213 33 198 388 20 20 chr2 224017581 224017728 -29238855 + L2 LINE L2 2827 2973 -299 1783 124 43 0 chr2 224017736 224017994 -29238589 - AluSx SINE Alu -10 302 34 635 168 76 8 chr2 224018202 224018333 -29238250 - MER69 DNA AcHobo -4 2522 2383 271 262 0 0 chr2 224018463 224018524 -29238059 - MER69 DNA AcHobo -2464 62 2 187 375 0 0 chr2 224018533 224018597 -29237986 + L2 LINE L2 3196 3259 -13 1871 184 150 43 chr2 224018619 224019153 -29237430 + MER92B LTR ERV1 46 636 0 303 28 0 0 chr2 224019864 224019900 -29236683 + (ATG)n Simple_repeat Simple_repeat 3 38 0 2000 101 4 4 chr2 224019900 224020177 -29236406 - AluSc SINE Alu -32 277 1 21 100 0 0 chr2 224020489 224020559 -29236024 + AT_rich Low_complexity Low_complexity 1 70 0 1333 204 102 13 chr2 224021439 224021821 -29234762 - Charlie1 DNA MER1_type 0 2761 2346 264 261 29 0 chr2 224021822 224021891 -29234692 - Charlie1 DNA MER1_type -2690 71 1 283 226 0 60 chr2 224023144 224023228 -29233355 - L2 LINE L2 -12 3301 3223 26 74 0 0 chr2 224025497 224025551 -29231032 + AT_rich Low_complexity Low_complexity 1 54 0 2327 98 0 0 chr2 224025665 224025970 -29230613 - AluSq SINE Alu -4 309 5 498 285 53 7 chr2 224026335 224026486 -29230097 + MER5B DNA MER1_type 20 177 -1 37 39 0 0 chr2 224027213 224027264 -29229319 + AT_rich Low_complexity Low_complexity 1 51 0 188 333 14 14 chr2 224027644 224027716 -29228867 - L2 LINE L2 -497 2817 2746 726 301 131 67 chr2 224028315 224029057 -29227526 - L2 LINE L2 0 3313 2511 464 249 295 24 chr2 224029634 224030003 -29226580 - MLT1H LTR MaLR -14 535 67 24 53 0 0 chr2 224030650 224030688 -29225895 + AT_rich Low_complexity Low_complexity 1 38 0 357 24 0 0 chr2 224031255 224031297 -29225286 + (TG)n Simple_repeat Simple_repeat 2 43 0 487 210 204 6 chr2 224032128 224032285 -29224298 + MER5A DNA MER1_type 1 188 -1 302 289 144 29 chr2 224032289 224032462 -29224121 - MIR SINE MIR -16 246 54 318 312 168 0 chr2 224032599 224032724 -29223859 - L2 LINE L2 -1 3312 3167 349 150 38 0 chr2 224033017 224033097 -29223486 + (TATATG)n Simple_repeat Simple_repeat 4 86 0 581 230 74 159 chr2 224036443 224036878 -29219705 + L1ME3A LINE L1 5734 6131 -39 372 43 0 0 chr2 224036895 224036941 -29219642 + (ATG)n Simple_repeat Simple_repeat 1 46 0 214 322 94 29 chr2 224037111 224037282 -29219301 + MIR SINE MIR 19 200 -62 6226 86 21 3 chr2 224037441 224038310 -29218273 - L1PA11 LINE L1 -6 6168 5285 249 262 16 0 chr2 224038380 224038441 -29218142 + (CA)n Simple_repeat Simple_repeat 1 62 0 183 135 0 173 chr2 224039749 224039801 -29216782 - MIR SINE MIR 0 262 220 2073 122 3 0 chr2 224039928 224040222 -29216361 + AluSx SINE Alu 1 295 -17 1440 199 46 11 chr2 224042597 224042878 -29213705 - AluJo SINE Alu -21 291 1 755 156 8 0 chr2 224042878 224043006 -29213577 - L1MB2 LINE L1 -45 6126 5998 258 330 122 9 chr2 224043889 224044004 -29212579 + L2 LINE L2 3116 3243 -29 2050 125 0 16 chr2 224044630 224044934 -29211649 + AluSx SINE Alu 3 301 -11 346 219 0 0 chr2 224045184 224045257 -29211326 + L1MC2 LINE L1 6261 6333 -11 374 306 86 40 chr2 224045272 224045494 -29211089 + L3b LINE CR1 1180 1411 -172 21 0 0 0 chr2 224046905 224046926 -29209657 + AT_rich Low_complexity Low_complexity 1 21 0 30 77 0 0 chr2 224047701 224047766 -29208817 + AT_rich Low_complexity Low_complexity 1 65 0 21 57 0 0 chr2 224048186 224048221 -29208362 + AT_rich Low_complexity Low_complexity 1 35 0 892 291 28 20 chr2 224049834 224050366 -29206217 + MLT1G1 LTR MaLR 6 551 -16 254 300 38 25 chr2 224050979 224051059 -29205524 + L2 LINE L2 3191 3271 -1 1640 184 21 0 chr2 224051309 224051597 -29204986 + AluJo SINE Alu 3 296 -16 769 334 43 48 chr2 224051788 224051834 -29204749 - L2 LINE L2 -1 3312 3267 2032 121 0 4 chr2 224051834 224052174 -29204409 - AluSc SINE Alu 0 339 1 769 334 43 48 chr2 224052174 224052545 -29204038 - L2 LINE L2 -46 3267 2896 255 241 58 11 chr2 224052552 224052639 -29203944 + L1MEd LINE L1 1147 1237 -4882 343 277 138 67 chr2 224052660 224053050 -29203533 + L1MEd LINE L1 1258 1675 -4454 27 0 0 0 chr2 224053311 224053338 -29203245 + AT_rich Low_complexity Low_complexity 1 27 0 503 287 139 55 chr2 224053394 224053739 -29202844 - MLT1J2 LTR MaLR 0 450 77 21 36 0 0 chr2 224053929 224053957 -29202626 + AT_rich Low_complexity Low_complexity 1 28 0 337 122 23 46 chr2 224054184 224054315 -29202268 + (TA)n Simple_repeat Simple_repeat 2 129 0 288 0 0 0 chr2 224054315 224054347 -29202236 + (GA)n Simple_repeat Simple_repeat 2 33 0 9994 92 13 4 chr2 224055857 224058067 -29198516 - L1PA7 LINE L1 -4 6150 3929 186 43 0 0 chr2 224058464 224058487 -29198096 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 3653 253 119 27 chr2 224059162 224060200 -29196383 - L1ME2 LINE L1 -110 5988 5047 228 35 0 0 chr2 224060200 224060229 -29196354 + (CAA)n Simple_repeat Simple_repeat 2 30 0 3653 253 119 27 chr2 224060229 224061642 -29194941 - L1ME2 LINE L1 -1051 5047 3299 2988 106 16 103 chr2 224061657 224062222 -29194361 - L1PB1 LINE L1 -1 6150 5635 1547 255 33 52 chr2 224062227 224062902 -29193681 - L1ME2 LINE L1 -5019 1051 390 308 161 21 21 chr2 224062908 224063001 -29193582 + (TA)n Simple_repeat Simple_repeat 2 94 0 189 0 0 0 chr2 224063031 224063052 -29193531 + (T)n Simple_repeat Simple_repeat 1 21 0 240 189 27 40 chr2 224063216 224063290 -29193293 + T-rich Low_complexity Low_complexity 5 77 0 22 0 0 0 chr2 224063723 224063745 -29192838 + AT_rich Low_complexity Low_complexity 1 22 0 756 146 39 0 chr2 224063746 224063876 -29192707 + L1PB2 LINE L1 6010 6144 -7 2490 77 0 0 chr2 224064382 224064695 -29191888 + AluSq SINE Alu 1 313 0 214 250 19 0 chr2 224064768 224064820 -29191763 + CT-rich Low_complexity Low_complexity 1 53 0 21 0 0 0 chr2 224066160 224066181 -29190402 + AT_rich Low_complexity Low_complexity 1 21 0 268 277 21 43 chr2 224066196 224066290 -29190293 + MIR3 SINE MIR 111 202 -6 180 0 0 0 chr2 224066464 224066484 -29190099 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1179 165 77 0 chr2 224066487 224066748 -29189835 - L1MA9 LINE L1 -6 6306 6026 221 306 208 48 chr2 224067687 224067981 -29188602 + L2 LINE L2 2636 2976 -338 5640 173 32 10 chr2 224068009 224069333 -29187250 - L1MC2 LINE L1 -11 6333 4978 567 282 143 23 chr2 224069381 224069640 -29186943 + L2 LINE L2 3024 3313 0 5467 171 37 58 chr2 224069998 224072095 -29184488 + L1MA7 LINE L1 3958 5883 -408 228 185 0 0 chr2 224072302 224072356 -29184227 + (TG)n Simple_repeat Simple_repeat 2 55 0 473 366 82 55 chr2 224074061 224074585 -29181998 + L2 LINE L2 2773 3308 -5 2153 121 3 6 chr2 224075076 224075390 -29181193 + AluSq SINE Alu 1 313 0 379 128 0 147 chr2 224075755 224075857 -29180726 - MER63 DNA MER1_type -166 895 809 37617 85 7 8 chr2 224075857 224082006 -29174577 - L1PA6 LINE L1 -4 6150 11 1015 287 30 68 chr2 224082557 224082661 -29173922 + L1ME1 LINE L1 36 142 -6254 1807 100 24 0 chr2 224082661 224082910 -29173673 - AluSc SINE Alu -12 297 43 1015 287 30 68 chr2 224082910 224083244 -29173339 + L1ME1 LINE L1 142 457 -5939 * 1156 234 151 7 chr2 224083240 224083698 -29172885 + L1ME1 LINE L1 2709 3232 -2983 299 247 14 0 chr2 224083683 224083756 -29172827 + L1ME1 LINE L1 3860 3933 -2282 * 1172 218 75 13 chr2 224083759 224084131 -29172452 + L1ME1 LINE L1 4528 4922 -1293 2069 243 80 32 chr2 224085077 224085734 -29170849 + L1ME1 LINE L1 5546 6226 -9 244 357 70 29 chr2 224086210 224086381 -29170202 - MIR3 SINE MIR -1 207 30 26 0 0 0 chr2 224086668 224086694 -29169889 + AT_rich Low_complexity Low_complexity 1 26 0 383 255 39 0 chr2 224086992 224087094 -29169489 - MIR SINE MIR -37 225 120 2802 163 25 24 chr2 224088325 224088355 -29168228 - L1M2 LINE L1 -491 5821 5793 360 94 0 0 chr2 224088355 224088408 -29168175 + (TG)n Simple_repeat Simple_repeat 2 54 0 2802 163 25 24 chr2 224088408 224089029 -29167554 - L1M2 LINE L1 -519 5793 5165 2028 118 18 4 chr2 224089084 224089363 -29167220 + AluSg SINE Alu 1 283 -27 27 0 0 0 chr2 224089363 224089390 -29167193 + AT_rich Low_complexity Low_complexity 1 27 0 690 245 21 0 chr2 224089407 224089599 -29166984 - L1M2 LINE L1 -977 5169 4974 1626 152 27 3 chr2 224089604 224089900 -29166683 + L1MA9 LINE L1 5863 6165 -147 1873 162 0 0 chr2 224090022 224090340 -29166243 + AluSx SINE Alu 1 318 0 5277 181 34 22 chr2 224091349 224092310 -29164273 - L1MA4A LINE L1 -7 6998 6001 2252 78 0 0 chr2 224092310 224092625 -29163958 - AluY SINE Alu 0 315 1 5277 181 34 22 chr2 224092625 224093423 -29163160 - L1MA4A LINE L1 -1004 6001 5214 * 11082 214 53 40 chr2 224093417 224094854 -29161729 - L1MA4A LINE L1 -2434 4414 2997 2837 10 0 0 chr2 224094854 224095162 -29161421 - AluYa5 SINE Alu -3 308 1 11082 214 53 40 chr2 224095162 224098071 -29158512 - L1MA4A LINE L1 -3851 2997 13 1973 151 7 0 chr2 224099066 224099365 -29157218 + AluSx SINE Alu 1 301 -11 4860 181 25 54 chr2 224099452 224100279 -29156304 - L1PB4 LINE L1 0 6213 5364 2207 170 34 12 chr2 224100279 224100696 -29155887 + MSTB LTR MaLR 1 426 0 4860 181 25 54 chr2 224100696 224101610 -29154973 - L1PB4 LINE L1 -849 5364 4426 232 220 0 0 chr2 224101610 224101669 -29154914 + LTR66 LTR ERVL 381 439 -171 483 63 0 0 chr2 224101671 224101734 -29154849 + (CA)n Simple_repeat Simple_repeat 2 64 0 4860 181 25 54 chr2 224101734 224101942 -29154641 - L1PB4 LINE L1 -1788 4425 4262 1031 275 74 25 chr2 224101942 224102306 -29154277 - LTR26 LTR ERV1 -221 382 1 5061 175 59 29 chr2 224102694 224102801 -29153782 - LTR49-int LTR ERV1 -641 5974 5872 2241 102 7 3 chr2 224102801 224103104 -29153479 - AluSc SINE Alu -5 304 1 5061 175 59 29 chr2 224103104 224104257 -29152326 - LTR49-int LTR ERV1 -743 5872 4573 3067 211 9 32 chr2 224104257 224104586 -29151997 + L1 LINE L1 3429 3764 -2382 360 0 0 0 chr2 224104586 224104626 -29151957 + (TAA)n Simple_repeat Simple_repeat 3 42 0 3067 211 9 32 chr2 224104626 224105070 -29151513 + L1 LINE L1 3764 4184 -1962 4187 247 24 46 chr2 224105087 224106043 -29150540 - L1PB4 LINE L1 -2740 3463 2487 2215 108 0 7 chr2 224106043 224106340 -29150243 - AluSx SINE Alu -17 295 1 4187 247 24 46 chr2 224106340 224107418 -29149165 - L1PB4 LINE L1 -3716 2487 1445 21036 178 10 12 chr2 224107418 224107760 -29148823 - L1PA13 LINE L1 -5 6809 6468 3821 90 2 4 chr2 224107760 224108272 -29148311 + MER9 LTR ERVK 1 511 0 21036 178 10 12 chr2 224108272 224113346 -29143237 - L1PA13 LINE L1 -346 6468 1396 393 265 34 61 chr2 224113349 224113496 -29143087 - L1PA13 LINE L1 -5529 1258 1116 766 262 94 41 chr2 224113498 224114016 -29142567 - L1PB4 LINE L1 -4912 1291 690 206 0 0 65 chr2 224114028 224114059 -29142524 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 417 371 10 10 chr2 224114117 224114319 -29142264 - L1PB4 LINE L1 -5649 555 354 182 328 156 0 chr2 224117014 224117136 -29139447 + MIR SINE MIR 112 252 -10 370 275 33 0 chr2 224118043 224118134 -29138449 + MIR SINE MIR 19 112 -150 1781 191 0 0 chr2 224119059 224119389 -29137194 - AluJo SINE Alu 0 330 1 412 339 31 26 chr2 224120672 224120864 -29135719 - MIR3 SINE MIR -14 194 2 405 285 46 13 chr2 224121083 224121234 -29135349 - MLT1L LTR MaLR -11 604 449 417 282 56 21 chr2 224121340 224121482 -29135101 - MLT1L LTR MaLR -333 282 136 2280 98 20 0 chr2 224121928 224122233 -29134350 - AluSx SINE Alu -1 311 1 356 88 35 0 chr2 224122688 224122745 -29133838 + MER41B LTR ERV1 480 538 -97 293 0 27 0 chr2 224122745 224122782 -29133801 + (CA)n Simple_repeat Simple_repeat 1 38 0 208 265 29 29 chr2 224123284 224123352 -29133231 + L2 LINE L2 3242 3309 -4 248 302 86 72 chr2 224123657 224123935 -29132648 + L2 LINE L2 2831 3112 -160 2138 117 29 35 chr2 224124029 224124406 -29132177 - THE1C LTR MaLR 0 375 1 360 294 27 55 chr2 224125737 224125883 -29130700 - MER5B DNA MER1_type -8 170 29 240 59 0 0 chr2 224126882 224126916 -29129667 + (TTTA)n Simple_repeat Simple_repeat 1 34 0 352 286 31 0 chr2 224128817 224128915 -29127668 - MER5A DNA MER1_type -85 104 4 200 289 40 13 chr2 224129473 224129549 -29127034 + L2 LINE L2 3203 3280 -33 1228 219 160 28 chr2 224129656 224130044 -29126539 + MLT1D LTR MaLR 65 503 -2 2584 56 0 0 chr2 224130221 224130527 -29126056 + AluY SINE Alu 1 306 -5 525 239 153 0 chr2 224130859 224131035 -29125548 + MIR SINE MIR 32 234 -28 2138 118 0 23 chr2 224131710 224132016 -29124567 - AluSx SINE Alu -9 303 5 23 33 0 0 chr2 224132200 224132230 -29124353 + AT_rich Low_complexity Low_complexity 1 30 0 331 304 10 92 chr2 224132387 224132594 -29123989 - MIR SINE MIR 0 262 73 2151 121 0 31 chr2 224133542 224133865 -29122718 + AluSq SINE Alu 1 313 0 1108 287 60 16 chr2 224133978 224134410 -29122173 - LTR16A LTR ERVL 0 457 3 913 312 78 47 chr2 224134586 224135263 -29121320 - ERVL LTR ERVL -361 5293 4596 2067 144 0 0 chr2 224135531 224135830 -29120753 + AluSx SINE Alu 5 303 -9 271 381 17 13 chr2 224136086 224136317 -29120266 - ERVL LTR ERVL -3196 2568 2337 1824 301 107 81 chr2 224136337 224138495 -29118088 - ERVL LTR ERVL -2781 2215 2 651 305 100 11 chr2 224138506 224138853 -29117730 - LTR16A LTR ERVL -9 441 58 210 37 0 0 chr2 224139027 224139054 -29117529 + (TA)n Simple_repeat Simple_repeat 1 27 0 2323 83 3 3 chr2 224139310 224139610 -29116973 - AluSc SINE Alu -5 304 5 24 0 0 0 chr2 224139785 224139809 -29116774 + AT_rich Low_complexity Low_complexity 1 24 0 564 250 49 14 chr2 224141224 224141368 -29115215 - MER63A DNA MER1_type -15 195 47 1967 131 31 0 chr2 224141791 224142081 -29114502 + AluSg1 SINE Alu 1 299 -10 4095 223 56 4 chr2 224142218 224142583 -29114000 - L1M4 LINE L1 -585 5593 5248 1947 144 10 7 chr2 224142583 224142888 -29113695 - AluSq SINE Alu -7 306 1 4095 223 56 4 chr2 224142888 224143773 -29112810 - L1M4 LINE L1 -930 5248 4281 282 104 2 0 chr2 224144217 224144262 -29112321 - L1P4 LINE L1 -432 5724 5679 266 105 0 0 chr2 224144262 224144300 -29112283 + L1P2 LINE L1 5739 5776 -378 421 338 122 11 chr2 224144319 224144606 -29111977 - L3 LINE CR1 -409 1168 850 443 117 0 13 chr2 224144630 224144707 -29111876 + (TCCC)n Simple_repeat Simple_repeat 1 76 0 908 206 37 37 chr2 224144707 224144925 -29111658 - AluJo SINE Alu -10 302 85 24 32 0 0 chr2 224144998 224145029 -29111554 + AT_rich Low_complexity Low_complexity 1 31 0 180 111 0 0 chr2 224145550 224145577 -29111006 + (CGTG)n Simple_repeat Simple_repeat 4 30 0 396 0 0 0 chr2 224146730 224146774 -29109809 + (TCTA)n Simple_repeat Simple_repeat 1 44 0 634 152 0 0 chr2 224148078 224148183 -29108400 - FRAM SINE Alu -26 150 46 365 350 87 40 chr2 224148405 224148728 -29107855 - L2 LINE L2 -13 3300 2994 2346 57 0 0 chr2 224148728 224149009 -29107574 + AluY SINE Alu 1 281 -30 450 0 0 0 chr2 224149009 224149059 -29107524 + (CTAA)n Simple_repeat Simple_repeat 3 52 0 365 350 87 40 chr2 224149059 224149352 -29107231 - L2 LINE L2 -318 2995 2661 276 366 42 35 chr2 224149361 224149506 -29107077 - MIR SINE MIR -66 142 10 700 334 160 13 chr2 224149581 224150036 -29106547 + L3 LINE CR1 1053 1574 -3 24 0 0 0 chr2 224150143 224150167 -29106416 + AT_rich Low_complexity Low_complexity 1 24 0 22 56 0 0 chr2 224150914 224150950 -29105633 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr2 224151144 224151173 -29105410 + AT_rich Low_complexity Low_complexity 1 29 0 440 352 93 22 chr2 224151348 224151811 -29104772 + L2 LINE L2 1807 2302 -1012 216 281 53 0 chr2 224152488 224152545 -29104038 - L2 LINE L2 -25 3247 3188 296 290 0 0 chr2 224152590 224152652 -29103931 - L2 LINE L2 -333 2980 2919 183 325 133 0 chr2 224152807 224152890 -29103693 - L2 LINE L2 -561 2753 2660 277 327 182 6 chr2 224153904 224154063 -29102520 - L2 LINE L2 -1891 1423 1237 221 367 59 35 chr2 224154427 224154683 -29101900 - L2 LINE L2 -2414 900 639 989 273 50 31 chr2 224157374 224157795 -29098788 + L1MCc LINE L1 17 445 -5978 315 309 8 40 chr2 224157911 224158037 -29098546 + L1MCc LINE L1 649 770 -5653 356 265 20 20 chr2 224158179 224158281 -29098302 + L1MCc LINE L1 789 890 -5533 234 267 0 13 chr2 224158305 224158380 -29098203 + GA-rich Low_complexity Low_complexity 1 74 0 2043 176 50 20 chr2 224158385 224158789 -29097794 - MLT2C2 LTR ERVL -48 416 1 998 238 127 23 chr2 224158793 224158839 -29097744 + L1MCc LINE L1 3133 3173 -3768 2103 118 4 0 chr2 224158839 224159141 -29097442 + AluSg SINE Alu 3 305 0 998 238 127 23 chr2 224159141 224159488 -29097095 + L1MCc LINE L1 3173 3568 -3373 * 1251 231 47 12 chr2 224159475 224159813 -29096770 + L1ME1 LINE L1 5812 6161 -5 256 214 228 21 chr2 224160305 224160450 -29096133 - L1ME3A LINE L1 -9 6161 5987 927 254 38 23 chr2 224160465 224160808 -29095775 - L1ME3A LINE L1 -229 5941 5594 22 56 0 0 chr2 224160813 224160849 -29095734 + AT_rich Low_complexity Low_complexity 1 36 0 371 82 0 16 chr2 224161541 224161602 -29094981 + (TA)n Simple_repeat Simple_repeat 2 61 0 4119 121 35 40 chr2 224161604 224162309 -29094274 + L1PA16 LINE L1 5456 6157 -9 2255 214 149 5 chr2 224162317 224162956 -29093627 + LTR48 LTR ERV1 57 787 0 1721 161 68 25 chr2 224162982 224163336 -29093247 + THE1C LTR MaLR 3 371 -4 197 232 213 77 chr2 224163687 224163842 -29092741 + L2 LINE L2 3127 3302 -11 847 210 13 0 chr2 224163878 224164035 -29092548 - FRAM SINE Alu -7 159 1 186 118 0 0 chr2 224164060 224164094 -29092489 + (TTGG)n Simple_repeat Simple_repeat 2 35 0 2021 94 3 72 chr2 224164094 224164396 -29092187 - AluSx SINE Alu -22 290 10 1109 202 5 5 chr2 224164399 224164612 -29091971 - AluJb SINE Alu -9 303 91 21 0 0 0 chr2 224164913 224164934 -29091649 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr2 224164987 224165022 -29091561 + AT_rich Low_complexity Low_complexity 1 35 0 23 33 0 0 chr2 224165682 224165712 -29090871 + AT_rich Low_complexity Low_complexity 1 30 0 20718 162 40 18 chr2 224165739 224166928 -29089655 - L1MA3 LINE L1 0 7724 6563 6282 75 2 3 chr2 224166928 224167664 -29088919 - L1PA8A LINE L1 -1 6130 5394 264 77 0 0 chr2 224167664 224167703 -29088880 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2115 111 4 0 chr2 224167703 224167982 -29088601 - AluSp SINE Alu -28 285 6 6282 75 2 3 chr2 224167982 224168583 -29088000 - L1PA8A LINE L1 -735 5396 4811 20718 162 40 18 chr2 224168583 224174919 -29081664 - L1MA3 LINE L1 -1161 6563 9 366 322 100 55 chr2 224175092 224175364 -29081219 - HAL1b LINE L1 -644 704 413 2404 89 0 0 chr2 224175364 224175666 -29080917 - AluSg SINE Alu -8 302 1 366 322 100 55 chr2 224175666 224175722 -29080861 - HAL1b LINE L1 -935 413 361 406 269 172 16 chr2 224176102 224176288 -29080295 - MIR SINE MIR -46 216 2 2000 124 16 10 chr2 224176316 224176623 -29079960 - AluSg SINE Alu 0 310 2 1997 172 67 12 chr2 224176635 224177262 -29079321 + MER39 LTR ERV1 1 707 0 801 75 56 0 chr2 224177738 224177899 -29078684 + (TA)n Simple_repeat Simple_repeat 1 170 0 2163 179 222 22 chr2 224178136 224178207 -29078376 - MER39 LTR ERV1 -4 703 647 2553 107 3 0 chr2 224178207 224178561 -29078022 + THE1A LTR MaLR 1 355 0 2163 179 222 22 chr2 224178561 224179075 -29077508 - MER39 LTR ERV1 -60 647 1 200 310 138 11 chr2 224179453 224179540 -29077043 - MIR SINE MIR -142 120 23 1977 139 13 7 chr2 224180903 224181212 -29075371 - AluSq SINE Alu -2 311 1 1245 207 19 70 chr2 224181926 224182240 -29074343 + MLT1D LTR MaLR 1 298 -207 555 184 10 0 chr2 224182238 224182336 -29074247 - MER34C LTR ERV1 -486 99 1 * 2201 112 0 3 chr2 224182475 224182771 -29073812 - AluSx SINE Alu -17 295 1 1250 164 50 23 chr2 224182850 224183276 -29073307 - LTR54 LTR ERV1 -2 508 1 23 78 0 0 chr2 224186810 224186861 -29069722 + AT_rich Low_complexity Low_complexity 1 51 0 1308 192 10 78 chr2 224187079 224187386 -29069197 - AluJo SINE Alu -26 286 1 467 79 26 0 chr2 224187411 224187487 -29069096 - L1HS LINE L1 0 6155 6078 2167 121 0 0 chr2 224187865 224188170 -29068413 + AluSx SINE Alu 1 305 -7 31 26 0 0 chr2 224188229 224188267 -29068316 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr2 224188987 224189017 -29067566 + AT_rich Low_complexity Low_complexity 1 30 0 24 77 0 0 chr2 224189435 224189487 -29067096 + AT_rich Low_complexity Low_complexity 1 52 0 2192 104 0 3 chr2 224189493 224189792 -29066791 - AluSc SINE Alu -11 298 1 250 202 22 56 chr2 224190062 224190151 -29066432 - MLT1H LTR MaLR -91 458 373 229 286 123 53 chr2 224190172 224190343 -29066240 - MLT1I LTR MaLR -122 287 105 235 179 45 15 chr2 224190572 224190639 -29065944 + (TA)n Simple_repeat Simple_repeat 2 70 0 31 0 0 0 chr2 224190863 224190894 -29065689 + AT_rich Low_complexity Low_complexity 1 31 0 1642 230 81 16 chr2 224191036 224191551 -29065032 - MLT1E2 LTR MaLR 0 626 28 2236 174 26 19 chr2 224191551 224191970 -29064613 - MSTB LTR MaLR 0 426 5 210 37 0 0 chr2 224192159 224192186 -29064397 + (CA)n Simple_repeat Simple_repeat 2 28 0 1882 172 28 42 chr2 224193298 224193723 -29062860 - MSTB1 LTR MaLR -13 419 1 2040 176 188 10 chr2 224194555 224195050 -29061533 - MER39 LTR ERV1 -9 698 116 21 0 0 0 chr2 224195273 224195294 -29061289 + AT_rich Low_complexity Low_complexity 1 21 0 1933 115 21 0 chr2 224195534 224195813 -29060770 + AluSx SINE Alu 7 291 -21 671 324 69 21 chr2 224196545 224197124 -29059459 + L2 LINE L2 2607 3225 -88 472 271 131 36 chr2 224198632 224198853 -29057730 - MIR SINE MIR 0 262 21 518 337 45 29 chr2 224198864 224199107 -29057476 - MIR SINE MIR -9 253 7 1177 199 9 0 chr2 224199128 224199349 -29057234 + MER58A DNA MER1_type 2 224 0 571 281 20 20 chr2 224199613 224199766 -29056817 + MIR SINE MIR 18 170 -92 279 250 0 14 chr2 224199770 224199842 -29056741 + Tigger1 DNA MER2_type 1 71 -2347 1829 150 77 14 chr2 224199842 224200195 -29056388 - THE1C LTR MaLR 0 375 1 5827 124 32 6 chr2 224200195 224201101 -29055482 - THE1C-int LTR MaLR 0 1580 651 9203 136 38 19 chr2 224201105 224201253 -29055330 + Tigger1 DNA MER2_type 834 978 -1440 2031 114 0 0 chr2 224201253 224201533 -29055050 + AluSx SINE Alu 11 290 -22 9203 136 38 19 chr2 224201533 224202940 -29053643 + Tigger1 DNA MER2_type 978 2418 0 2268 118 0 0 chr2 224203195 224203501 -29053082 + AluSg SINE Alu 2 307 -3 317 351 26 26 chr2 224203921 224204075 -29052508 + MIR SINE MIR 13 166 -96 396 298 69 8 chr2 224204084 224204215 -29052368 - L2 LINE L2 -2 3311 3173 243 0 0 0 chr2 224204277 224204304 -29052279 + (ATG)n Simple_repeat Simple_repeat 3 29 0 180 0 0 0 chr2 224204626 224204646 -29051937 + (TA)n Simple_repeat Simple_repeat 2 21 0 314 254 9 55 chr2 224204649 224204759 -29051824 + L1MC4 LINE L1 6615 6719 -1323 312 342 7 54 chr2 224206501 224206650 -29049933 - MIR3 SINE MIR -45 163 22 24 0 0 0 chr2 224207731 224207755 -29048828 + AT_rich Low_complexity Low_complexity 1 24 0 675 293 99 54 chr2 224209258 224209904 -29046679 + L1M4 LINE L1 2473 3147 -2999 279 186 31 0 chr2 224209947 224210044 -29046539 + (TA)n Simple_repeat Simple_repeat 1 100 0 190 0 32 32 chr2 224210196 224210227 -29046356 + (TA)n Simple_repeat Simple_repeat 1 31 0 186 43 0 0 chr2 224210406 224210429 -29046154 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 417 254 58 29 chr2 224211736 224211874 -29044709 + MIR SINE MIR 120 261 -1 2438 68 0 6 chr2 224211920 224212231 -29044352 + AluY SINE Alu 1 309 -2 26 50 0 0 chr2 224212506 224212546 -29044037 + AT_rich Low_complexity Low_complexity 1 40 0 21 36 0 0 chr2 224213217 224213245 -29043338 + AT_rich Low_complexity Low_complexity 1 28 0 2296 89 0 3 chr2 224213252 224213545 -29043038 + AluSq SINE Alu 3 294 -19 365 58 19 0 chr2 224213545 224213597 -29042986 + (TA)n Simple_repeat Simple_repeat 2 54 0 23 86 0 0 chr2 224214664 224214722 -29041861 + AT_rich Low_complexity Low_complexity 1 58 0 362 294 72 13 chr2 224214843 224214996 -29041587 + MIR SINE MIR 100 261 -1 245 331 39 47 chr2 224215118 224215245 -29041338 + L2 LINE L2 3146 3271 -1 233 191 0 0 chr2 224215320 224215362 -29041221 + (CA)n Simple_repeat Simple_repeat 2 43 0 773 269 0 33 chr2 224215514 224215726 -29040857 + L1M4 LINE L1 14 218 -6324 * 1846 237 78 21 chr2 224215722 224216119 -29040464 + L1M4 LINE L1 547 920 -5622 378 0 0 0 chr2 224216119 224216161 -29040422 + (CA)n Simple_repeat Simple_repeat 1 42 0 180 0 0 0 chr2 224216160 224216180 -29040403 + (GA)n Simple_repeat Simple_repeat 2 21 0 * 1846 237 78 21 chr2 224216161 224216296 -29040287 + L1M4 LINE L1 920 1089 -5453 525 200 21 111 chr2 224216303 224216493 -29040090 + MLT1D LTR MaLR 50 222 -283 833 216 11 0 chr2 224216498 224216674 -29039909 + MLT1D LTR MaLR 328 505 0 4270 241 81 5 chr2 224216686 224218062 -29038521 - L1M4 LINE L1 -1814 4332 2852 3909 117 97 42 chr2 224218064 224218828 -29037755 - Tigger3(Golem) DNA MER2_type -2 3027 2222 1243 200 5 0 chr2 224218814 224219034 -29037549 - Tigger3(Golem) DNA MER2_type -2808 221 1 * 234 311 0 0 chr2 224219068 224219142 -29037441 - MLT1H LTR MaLR -459 90 17 287 259 0 0 chr2 224219162 224219220 -29037363 - MER94 DNA DNA 0 134 77 1237 188 17 8 chr2 224219233 224219472 -29037111 - AluJo SINE Alu -24 288 48 312 183 0 17 chr2 224219475 224219535 -29037048 - MER94 DNA DNA -75 59 1 243 146 0 0 chr2 224220585 224220626 -29035957 + (A)n Simple_repeat Simple_repeat 1 41 0 184 284 94 55 chr2 224221380 224221507 -29035076 + L2 LINE L2 2923 3054 -218 1396 245 0 16 chr2 224221585 224221891 -29034692 - AluJb SINE Alu -7 305 5 197 383 37 12 chr2 224221915 224221996 -29034587 + L2 LINE L2 3134 3216 -56 8131 212 64 92 chr2 224222432 224223786 -29032797 - L1P5 LINE L1 -473 7121 5730 4969 215 20 9 chr2 224223786 224225731 -29030852 - L1PA16 LINE L1 0 6166 4169 2200 127 19 24 chr2 224225738 224226108 -29030475 - THE1C LTR MaLR -7 368 1 8131 212 64 92 chr2 224226108 224227139 -29029444 - L1P5 LINE L1 -1870 5724 4665 1609 50 32 14 chr2 224227139 224227359 -29029224 - AluY SINE Alu 0 311 88 8131 212 64 92 chr2 224227359 224229635 -29026948 - L1P5 LINE L1 -2929 4665 2185 336 154 0 0 chr2 224229703 224229768 -29026815 - L1 LINE L1 -1817 4329 4265 2135 183 48 2 chr2 224229768 224230188 -29026395 - LTR24C LTR ERV1 -196 439 1 2619 175 17 59 chr2 224230197 224230774 -29025809 - MER39B LTR ERV1 -100 553 1 192 77 0 0 chr2 224230798 224230824 -29025759 + (CAG)n Simple_repeat Simple_repeat 1 26 0 369 245 68 36 chr2 224230949 224231141 -29025442 + HAL1b LINE L1 528 725 -623 1769 214 50 15 chr2 224231303 224231615 -29024968 - L1MD3 LINE L1 0 7995 7659 195 42 0 0 chr2 224231615 224231639 -29024944 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1769 214 50 15 chr2 224231639 224231802 -29024781 - L1MD3 LINE L1 -336 7659 7503 36 0 0 0 chr2 224231966 224232002 -29024581 + AT_rich Low_complexity Low_complexity 1 36 0 34 42 0 0 chr2 224232793 224232841 -29023742 + AT_rich Low_complexity Low_complexity 1 48 0 27 49 0 0 chr2 224233463 224233504 -29023079 + AT_rich Low_complexity Low_complexity 1 41 0 231 114 0 0 chr2 224233897 224233932 -29022651 + (CATATA)n Simple_repeat Simple_repeat 2 36 0 230 233 47 0 chr2 224233933 224234019 -29022564 - L1MC4 LINE L1 -1339 6703 6614 23 54 0 0 chr2 224235034 224235071 -29021512 + AT_rich Low_complexity Low_complexity 1 37 0 6154 212 40 26 chr2 224235870 224238444 -29018139 + L1MA6 LINE L1 1 2587 -3741 7892 164 23 67 chr2 224238449 224238989 -29017594 + L1MA6 LINE L1 3898 4460 -2022 2217 113 3 3 chr2 224238989 224239298 -29017285 + AluSc SINE Alu 1 309 0 7892 164 23 67 chr2 224239298 224240860 -29015723 + L1MA6 LINE L1 4460 5851 -631 312 27 0 0 chr2 224240860 224240897 -29015686 + (CA)n Simple_repeat Simple_repeat 2 38 0 7892 164 23 67 chr2 224240897 224241501 -29015082 + L1MA6 LINE L1 5851 6480 -2 424 312 153 45 chr2 224243529 224243837 -29012746 + L3 LINE CR1 1236 1576 -1 21 0 0 0 chr2 224244139 224244160 -29012423 + AT_rich Low_complexity Low_complexity 1 21 0 593 272 142 85 chr2 224246465 224246577 -29010006 - L2 LINE L2 -61 3252 3148 2328 110 11 8 chr2 224246577 224246931 -29009652 - THE1A LTR MaLR 0 355 1 10756 102 15 10 chr2 224246932 224248503 -29008080 - THE1A-int LTR MaLR -1 1579 1 2211 120 8 14 chr2 224248503 224248860 -29007723 - THE1A LTR MaLR 0 355 1 593 272 142 85 chr2 224248860 224249344 -29007239 - L2 LINE L2 -164 3149 2607 856 269 94 40 chr2 224249826 224250228 -29006355 - L2 LINE L2 -2 3311 2888 5495 150 30 33 chr2 224250473 224252442 -29004141 + L1MA5 LINE L1 4321 6300 0 2124 52 0 4 chr2 224253053 224253320 -29003263 - L1PA3 LINE L1 0 6155 5890 5987 28 3 1 chr2 224253320 224254047 -29002536 + L1P LINE L1 4303 5030 -1116 438 178 0 0 chr2 224254581 224254654 -29001929 + U5 snRNA snRNA 1 73 -43 2686 20 0 0 chr2 224254767 224255069 -29001514 - AluY SINE Alu -9 302 1 207 277 11 139 chr2 224255072 224255281 -29001302 - MIR3 SINE MIR -68 140 13 1839 158 14 0 chr2 224255429 224255726 -29000857 - AluJb SINE Alu -11 301 1 25 0 0 0 chr2 224256687 224256712 -28999871 + AT_rich Low_complexity Low_complexity 1 25 0 555 262 37 70 chr2 224257416 224257687 -28998896 - L1ME3A LINE L1 -263 5907 5646 303 85 0 0 chr2 224257758 224257805 -28998778 + (TG)n Simple_repeat Simple_repeat 2 48 0 303 145 66 0 chr2 224257858 224257934 -28998649 + (TATATG)n Simple_repeat Simple_repeat 2 82 0 553 291 31 53 chr2 224258148 224258375 -28998208 + MIR SINE MIR 17 238 -24 194 313 36 36 chr2 224258734 224258817 -28997766 + L2 LINE L2 2664 2746 -568 964 304 80 57 chr2 224259233 224260030 -28996553 + L1M4 LINE L1 2 822 -5720 207 0 0 0 chr2 224260030 224260053 -28996530 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 964 304 80 57 chr2 224260053 224260114 -28996469 + L1M4 LINE L1 822 880 -5662 437 176 7 139 chr2 224260124 224260311 -28996272 + L1MB4 LINE L1 5173 5335 -826 2074 195 129 2 chr2 224260312 224260738 -28995845 + MLT2B1 LTR ERVL 1 480 -40 22 56 0 0 chr2 224260738 224260774 -28995809 + AT_rich Low_complexity Low_complexity 1 36 0 1013 172 3 144 chr2 224260807 224260915 -28995668 + L1MB4 LINE L1 5333 5455 -716 978 128 43 0 chr2 224260915 224261079 -28995504 + L1MA3 LINE L1 6134 6304 -1 1013 172 3 144 chr2 224261079 224261290 -28995293 + L1MB4 LINE L1 5455 5607 -564 574 196 0 0 chr2 224261295 224261402 -28995181 - L1M3 LINE L1 -488 5692 5586 730 163 30 12 chr2 224261402 224261554 -28995029 + L1MB4 LINE L1 6011 6179 -1 24 53 0 0 chr2 224261653 224261691 -28994892 + AT_rich Low_complexity Low_complexity 1 38 0 1503 193 22 26 chr2 224262431 224262742 -28993841 + AluJb SINE Alu 2 311 -1 1851 223 14 0 chr2 224262784 224263143 -28993440 + MLT1A1 LTR MaLR 2 365 0 1274 218 13 77 chr2 224263278 224263668 -28992915 - MLT1A1 LTR MaLR 0 365 1 224 312 28 37 chr2 224264239 224264348 -28992235 - MIR SINE MIR -98 164 57 1651 151 3 60 chr2 224264538 224264857 -28991726 + AluSx SINE Alu 1 301 -11 320 216 0 11 chr2 224264857 224264945 -28991638 + GA-rich Low_complexity Low_complexity 1 87 0 23 0 0 0 chr2 224265414 224265437 -28991146 + AT_rich Low_complexity Low_complexity 1 23 0 281 279 66 33 chr2 224266352 224266474 -28990109 - L1ME4a LINE L1 -7 6114 5989 3958 247 88 88 chr2 224266690 224267678 -28988905 + L1M4b LINE L1 114 1168 -5687 435 151 14 14 chr2 224267678 224267751 -28988832 - Tigger5 DNA MER2_type 0 2323 2251 3958 247 88 88 chr2 224267751 224268283 -28988300 + L1M4b LINE L1 1168 1699 -5156 320 258 0 0 chr2 224268280 224268369 -28988214 - L1M4b LINE L1 -4837 1705 1617 * 1090 241 58 29 chr2 224268371 224268752 -28987831 + L1M4b LINE L1 1719 2110 -4536 830 237 0 6 chr2 224268835 224269012 -28987571 + MER82 DNA MER2_type 7 182 -471 5955 252 49 19 chr2 224269015 224270305 -28986278 + L1M4b LINE L1 2652 4034 -2610 1492 188 70 52 chr2 224270305 224270546 -28986037 - MLT1B LTR MaLR 0 390 138 2275 64 30 3 chr2 224270546 224270843 -28985740 + AluY SINE Alu 1 305 -6 1492 188 70 52 chr2 224270843 224270984 -28985599 - MLT1B LTR MaLR -252 138 1 5955 252 49 19 chr2 224270984 224271802 -28984781 + L1M4b LINE L1 4034 4825 -1819 * 9847 174 49 31 chr2 224271786 224273093 -28983490 + L1MB7 LINE L1 1 1363 -5021 3114 198 24 8 chr2 224273093 224273724 -28982859 + MER73 LTR ERVL 4 644 0 9847 174 49 31 chr2 224273724 224274502 -28982081 + L1MB7 LINE L1 1363 2125 -4259 3229 190 33 24 chr2 224274507 224275187 -28981396 - MER54A LTR ERVL -11 890 16 3391 219 47 26 chr2 224275187 224276282 -28980301 + L1MB7 LINE L1 2120 3191 -3191 2283 106 0 10 chr2 224276282 224276594 -28979989 + AluSx SINE Alu 3 311 -1 3391 219 47 26 chr2 224276594 224276775 -28979808 + L1MB7 LINE L1 3191 3367 -3015 1873 118 55 0 chr2 224276775 224277080 -28979503 + AluSq SINE Alu 1 320 0 3391 219 47 26 chr2 224277080 224277369 -28979214 + L1MB7 LINE L1 3367 3718 -2664 2429 204 75 100 chr2 224277359 224278392 -28978191 + L1MB7 LINE L1 4887 5945 -475 * 1085 60 0 0 chr2 224278392 224278525 -28978058 + L1PA8 LINE L1 6032 6164 -8 2429 204 75 100 chr2 224278525 224278813 -28977770 + L1MB7 LINE L1 5945 6238 -182 404 179 26 0 chr2 224278813 224278891 -28977692 + AluSc SINE Alu 216 295 -14 2429 204 75 100 chr2 224278891 224279048 -28977535 + L1MB7 LINE L1 6238 6397 -23 27 29 0 0 chr2 224279390 224279424 -28977159 + AT_rich Low_complexity Low_complexity 1 34 0 25 65 0 0 chr2 224280581 224280627 -28975956 + AT_rich Low_complexity Low_complexity 1 46 0 1721 179 10 13 chr2 224282019 224282332 -28974251 + AluJb SINE Alu 1 312 0 366 171 0 0 chr2 224282343 224282413 -28974170 + GA-rich Low_complexity Low_complexity 4 73 0 186 139 139 69 chr2 224282539 224282611 -28973972 + L3b LINE CR1 1276 1352 -231 2115 98 24 3 chr2 224283564 224283861 -28972722 + AluSc SINE Alu 1 303 -6 972 222 22 0 chr2 224286273 224286610 -28969973 + MLT1E1 LTR MaLR 65 654 0 701 238 64 17 chr2 224287156 224287328 -28969255 - MLT1E1 LTR MaLR -30 624 445 505 274 80 82 chr2 224287475 224288323 -28968260 + HAL1 LINE L1 874 1719 -788 3166 147 27 23 chr2 224288764 224289289 -28967294 + MER1A DNA MER1_type 1 527 0 23 54 0 0 chr2 224289635 224289672 -28966911 + AT_rich Low_complexity Low_complexity 1 37 0 1585 268 69 99 chr2 224292111 224292959 -28963624 - L1ME3A LINE L1 -61 6109 5302 330 172 52 0 chr2 224292974 224293032 -28963551 + MLT1G LTR MaLR 20 80 -510 * 1806 278 65 0 chr2 224293031 224293520 -28963063 + MLT1H1 LTR MaLR 27 547 -8 669 296 22 19 chr2 224293608 224293875 -28962708 + MLT1H1-int LTR MaLR 277 544 -827 468 261 74 92 chr2 224294553 224294878 -28961705 + MLT1H1-int LTR MaLR 1053 1371 0 1903 297 30 2 chr2 224294895 224295420 -28961163 + MLT1H1 LTR MaLR 16 555 0 226 219 228 0 chr2 224295527 224295650 -28960933 - L1ME3A LINE L1 -1343 4803 4653 2388 224 100 8 chr2 224295827 224296540 -28960043 - L1ME2 LINE L1 -205 5893 5126 555 239 88 38 chr2 224296576 224296961 -28959622 - L1ME2 LINE L1 -4754 1367 854 213 227 0 0 chr2 224297760 224297804 -28958779 + (TATG)n Simple_repeat Simple_repeat 2 45 0 2326 53 0 7 chr2 224297946 224298261 -28958322 + AluY SINE Alu 1 313 0 1226 204 24 8 chr2 224298496 224298746 -28957837 - MLT1A1 LTR MaLR -111 254 1 195 42 0 0 chr2 224299071 224299095 -28957488 + (TG)n Simple_repeat Simple_repeat 1 24 0 833 65 0 117 chr2 224300500 224300654 -28955929 + L1MA2 LINE L1 6169 6304 0 7374 23 0 0 chr2 224300679 224301539 -28955044 - L1PA3 LINE L1 -1161 4985 4126 7472 25 1 20 chr2 224301540 224302712 -28953871 + L1PA3 LINE L1 4998 6152 -3 210 167 0 0 chr2 224302715 224302751 -28953832 + A-rich Low_complexity Low_complexity 1 36 0 231 316 84 82 chr2 224303155 224303560 -28953023 - L2 LINE L2 -2324 990 585 23 33 0 0 chr2 224304929 224304959 -28951624 + AT_rich Low_complexity Low_complexity 1 30 0 2013 145 3 3 chr2 224305877 224306173 -28950410 + AluSg SINE Alu 1 296 -14 325 349 110 44 chr2 224306918 224307463 -28949120 + L2 LINE L2 2332 2912 -402 337 243 27 0 chr2 224307884 224307958 -28948625 - L2 LINE L2 -1 3312 3237 552 266 58 105 chr2 224308153 224308600 -28947983 + MER65A LTR ERV1 20 445 0 184 261 183 17 chr2 224308736 224308851 -28947732 - L2 LINE L2 -1276 2038 1905 661 281 59 5 chr2 224309931 224310197 -28946386 + MLT1I LTR MaLR 91 407 -2 244 151 0 75 chr2 224310989 224311042 -28945541 + MER39 LTR ERV1 4 52 -655 1284 203 50 45 chr2 224311058 224311519 -28945064 + LTR48 LTR ERV1 135 542 0 688 247 53 65 chr2 224312866 224313113 -28943470 + MIR SINE MIR 19 262 0 259 311 54 0 chr2 224314027 224314101 -28942482 + MER91C DNA MER1_type 33 110 -30 637 298 58 37 chr2 224314349 224314937 -28941646 + L1MEd LINE L1 586 1185 -4934 343 277 89 35 chr2 224314982 224315264 -28941319 + L1MEd LINE L1 1293 1589 -4721 400 264 264 16 chr2 224416519 224416701 -28839882 + MIR SINE MIR 20 246 -16 255 229 42 62 chr2 224417297 224417348 -28839235 - L1M3 LINE L1 -378 5790 5740 2792 71 3 0 chr2 224417348 224417702 -28838881 + THE1A LTR MaLR 1 355 0 255 229 42 62 chr2 224417702 224417746 -28838837 - L1M3 LINE L1 -428 5740 5697 235 163 23 0 chr2 224417754 224417797 -28838786 + MIR SINE MIR 99 142 -120 192 300 240 4 chr2 224418566 224418816 -28837767 + L2 LINE L2 2378 2686 -628 228 348 98 0 chr2 224419110 224419222 -28837361 + L2 LINE L2 3175 3297 -16 308 266 158 32 chr2 224419464 224419622 -28836961 - L1ME4a LINE L1 -226 5895 5718 2251 88 3 14 chr2 224419634 224419931 -28836652 - AluY SINE Alu -17 294 1 458 297 16 8 chr2 224420032 224420160 -28836423 + MIR SINE MIR 1 129 -133 1231 166 31 8 chr2 224420161 224420420 -28836163 - L1MB1 LINE L1 0 6168 5904 24 0 0 0 chr2 224420762 224420786 -28835797 + AT_rich Low_complexity Low_complexity 1 24 0 198 0 0 0 chr2 224421375 224421397 -28835186 + (A)n Simple_repeat Simple_repeat 1 22 0 3605 244 16 32 chr2 224421940 224422202 -28834381 + L1M4 LINE L1 4233 4498 -1648 2156 126 3 0 chr2 224422202 224422511 -28834072 + AluSx SINE Alu 1 310 -2 3605 244 16 32 chr2 224422511 224423454 -28833129 + L1M4 LINE L1 4498 5392 -754 357 253 139 66 chr2 224424125 224424291 -28832292 - L3 LINE CR1 -168 1409 1232 815 183 59 59 chr2 224426800 224427019 -28829564 + MER20 DNA MER1_type 1 219 0 304 75 0 0 chr2 224428854 224428894 -28827689 - Alu SINE Alu -262 40 1 291 140 0 0 chr2 224429472 224429522 -28827061 + (TG)n Simple_repeat Simple_repeat 2 51 0 915 243 22 22 chr2 224430308 224430534 -28826049 + L3b LINE CR1 1108 1333 -250 1675 158 18 0 chr2 224430671 224430944 -28825639 + AluJo SINE Alu 1 278 -34 198 98 98 0 chr2 224430960 224431021 -28825562 + (TGAA)n Simple_repeat Simple_repeat 2 68 0 232 284 92 28 chr2 224431069 224431178 -28825405 + L2 LINE L2 3156 3271 -1 287 293 114 16 chr2 224431345 224431468 -28825115 - MIR SINE MIR -70 192 58 9119 54 15 13 chr2 224431570 224434457 -28822126 + L1PA2 LINE L1 240 3117 -3038 9119 23 0 0 chr2 224434457 224436312 -28820271 + L1PA2 LINE L1 4302 6155 0 9119 54 15 13 chr2 224436312 224437261 -28819322 + L1PA2 LINE L1 3117 6155 0 1597 188 94 58 chr2 224437590 224437795 -28818788 - MLT1D LTR MaLR -8 497 301 2277 107 3 3 chr2 224437795 224438104 -28818479 - AluSg1 SINE Alu 0 309 1 1597 188 94 58 chr2 224438104 224438378 -28818205 - MLT1D LTR MaLR -204 301 1 1828 107 13 79 chr2 224438539 224438857 -28817726 + AluSq SINE Alu 1 297 -16 480 292 19 90 chr2 224438941 224439307 -28817276 - MER102b DNA MER1_type -1 340 1 971 277 125 30 chr2 224439691 224440131 -28816452 + MLT1L LTR MaLR 5 486 -129 1732 156 0 43 chr2 224440964 224441265 -28815318 + AluJo SINE Alu 1 288 -24 21 0 0 0 chr2 224441265 224441286 -28815297 + AT_rich Low_complexity Low_complexity 1 21 0 3321 114 16 6 chr2 224441421 224441921 -28814662 - Tigger3(Golem) DNA MER2_type 0 3029 2525 307 204 19 0 chr2 224441921 224441975 -28814608 - Tigger3(Golem) DNA MER2_type -2974 55 1 21 0 0 0 chr2 224442197 224442218 -28814365 + AT_rich Low_complexity Low_complexity 1 21 0 26 74 0 0 chr2 224442534 224442588 -28813995 + AT_rich Low_complexity Low_complexity 1 54 0 195 184 0 0 chr2 224442652 224442690 -28813893 + (CATA)n Simple_repeat Simple_repeat 2 39 0 23 0 0 0 chr2 224442885 224442908 -28813675 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr2 224443355 224443385 -28813198 + AT_rich Low_complexity Low_complexity 1 30 0 620 289 98 70 chr2 224443591 224443839 -28812744 + L3 LINE CR1 902 1142 -435 1624 163 6 27 chr2 224443839 224444177 -28812406 + L1MB3 LINE L1 5851 6181 -2 620 289 98 70 chr2 224444177 224444430 -28812153 + L3 LINE CR1 1142 1417 -160 180 311 49 0 chr2 224444525 224444586 -28811997 + MIR SINE MIR 19 82 -126 400 156 0 0 chr2 224444648 224444712 -28811871 - MLT1B LTR MaLR -2 388 325 334 343 58 23 chr2 224444861 224445033 -28811550 + HAL1 LINE L1 756 933 -1574 230 227 172 31 chr2 224445042 224445205 -28811378 + HAL1 LINE L1 975 1160 -1347 1435 74 5 11 chr2 224445240 224445252 -28811331 + AluY SINE Alu 121 132 -179 2568 36 7 7 chr2 224445252 224445561 -28811022 + AluYb8 SINE Alu 1 309 -9 1435 74 5 11 chr2 224445561 224445738 -28810845 + AluY SINE Alu 132 309 -2 31 0 0 0 chr2 224445741 224445772 -28810811 + AT_rich Low_complexity Low_complexity 1 31 0 421 226 97 0 chr2 224445798 224445891 -28810692 + FLAM_A SINE Alu 1 102 -40 209 217 0 0 chr2 224445922 224445968 -28810615 + (TA)n Simple_repeat Simple_repeat 1 46 0 254 320 17 39 chr2 224446014 224446145 -28810438 - MER5A DNA MER1_type -36 153 18 351 0 0 0 chr2 224446959 224446998 -28809585 + (TA)n Simple_repeat Simple_repeat 2 40 0 260 374 9 0 chr2 224449402 224449509 -28807074 - MIR3 SINE MIR -37 171 64 339 297 149 40 chr2 224450790 224451086 -28805497 - L1MC4a LINE L1 -1749 6059 5732 373 299 0 0 chr2 224451318 224451405 -28805178 + L2 LINE L2 3223 3309 -4 1527 179 24 18 chr2 224452349 224452685 -28803898 - L1MB8 LINE L1 -12 6166 5829 27 49 0 0 chr2 224452697 224452738 -28803845 + AT_rich Low_complexity Low_complexity 1 41 0 1815 154 4 0 chr2 224452742 224453009 -28803574 - AluJo SINE Alu -44 268 1 2141 167 32 2 chr2 224453012 224453596 -28802987 - L1MB8 LINE L1 -512 5672 5072 211 289 0 0 chr2 224455013 224455058 -28801525 - L2 LINE L2 -111 3161 3117 420 361 65 2 chr2 224455142 224455353 -28801230 - MIR SINE MIR -15 247 26 680 255 9 0 chr2 224455729 224455907 -28800676 - L1MA10 LINE L1 -5 6161 5986 194 333 24 24 chr2 224455979 224456063 -28800520 - L2 LINE L2 -352 2920 2837 1736 219 66 78 chr2 224456137 224456686 -28799897 + MLT1F LTR MaLR 1 542 0 232 305 0 0 chr2 224457180 224457239 -28799344 + MER5B DNA MER1_type 32 90 -88 280 341 12 0 chr2 224457497 224457579 -28799004 + MER5B DNA MER1_type 96 178 0 204 152 0 22 chr2 224458847 224458893 -28797690 + T-rich Low_complexity Low_complexity 4 48 0 409 276 86 40 chr2 224459240 224459544 -28797039 + L1MC4 LINE L1 5666 5983 -1825 1155 160 5 44 chr2 224459659 224459893 -28796690 + AluJb SINE Alu 87 312 0 210 282 32 81 chr2 224460149 224460273 -28796310 - L2 LINE L2 0 3313 3196 1151 301 173 30 chr2 224460314 224460700 -28795883 + L1MEc LINE L1 36 365 -6031 1090 139 0 0 chr2 224460700 224460866 -28795717 - L1PA8 LINE L1 -13 6159 5994 1151 301 173 30 chr2 224460866 224461246 -28795337 + L1MEc LINE L1 365 689 -5707 2337 155 30 28 chr2 224461246 224461678 -28794905 + Tigger2a DNA MER2_type 1 433 -1 1151 301 173 30 chr2 224461678 224462614 -28793969 + L1MEc LINE L1 689 1983 -4413 * 5508 112 11 8 chr2 224462602 224463426 -28793157 - L1PA13 LINE L1 -5 6158 5333 16085 195 15 15 chr2 224463527 224465835 -28790748 - L1P4 LINE L1 -655 5508 3204 234 0 0 0 chr2 224465835 224465861 -28790722 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 16085 195 15 15 chr2 224465861 224467020 -28789563 - L1P4 LINE L1 -2959 3204 2047 2337 105 0 0 chr2 224467052 224467356 -28789227 - AluSx SINE Alu -8 304 1 239 250 40 0 chr2 224467357 224467433 -28789150 + L1MEc LINE L1 1999 2077 -4319 1048 211 43 36 chr2 224467508 224467787 -28788796 + MER69 DNA AcHobo 2233 2513 -13 319 189 117 81 chr2 224467980 224468091 -28788492 + MER94 DNA DNA 2 116 -18 228 274 0 0 chr2 224468211 224468273 -28788310 + L1MC4 LINE L1 6640 6701 -1341 195 277 0 0 chr2 224468275 224468340 -28788243 + (TA)n Simple_repeat Simple_repeat 1 65 0 1243 202 34 3 chr2 224468400 224468872 -28787711 - MER34 LTR ERV1 0 542 29 2048 87 4 0 chr2 224470210 224470475 -28786108 + AluY SINE Alu 39 304 -7 269 180 0 16 chr2 224470499 224470560 -28786023 + CT-rich Low_complexity Low_complexity 2 61 0 21 57 0 0 chr2 224470796 224470831 -28785752 + AT_rich Low_complexity Low_complexity 1 35 0 1234 141 130 105 chr2 224470960 224471260 -28785323 - AluSx SINE Alu 0 307 1 248 382 7 7 chr2 224471330 224471482 -28785101 - L1M4 LINE L1 -467 5694 5543 429 315 75 44 chr2 224471588 224472122 -28784461 - L1M4 LINE L1 -748 5381 4865 8764 116 14 6 chr2 224472122 224473398 -28783185 + HSMAR1 DNA Mariner 1 1287 0 429 315 75 44 chr2 224473398 224473929 -28782654 - L1M4 LINE L1 -1264 4865 4283 364 320 19 43 chr2 224473934 224474190 -28782393 - L1M4 LINE L1 -4936 1183 934 270 0 0 0 chr2 224474255 224474285 -28782298 + (CA)n Simple_repeat Simple_repeat 1 30 0 1956 78 0 7 chr2 224474303 224474573 -28782010 - L1PA7 LINE L1 0 6154 5887 3557 87 2 0 chr2 224474573 224475067 -28781516 + L1P LINE L1 4418 4912 -1234 230 278 52 52 chr2 224475839 224475936 -28780647 + MIR SINE MIR 89 185 -77 931 272 61 46 chr2 224476498 224476892 -28779691 + LTR16A1 LTR ERVL 58 457 0 29 28 0 0 chr2 224477692 224477728 -28778855 + AT_rich Low_complexity Low_complexity 1 36 0 693 320 5 0 chr2 224478031 224478237 -28778346 - MIR SINE MIR 0 262 56 261 231 92 46 chr2 224478380 224478510 -28778073 - MIR SINE MIR -7 255 120 395 171 13 0 chr2 224478512 224478588 -28777995 - L1MA5 LINE L1 -365 5935 5859 1865 155 40 0 chr2 224478629 224478925 -28777658 - AluJb SINE Alu 0 312 5 272 222 61 61 chr2 224478927 224479107 -28777476 - L1MC5 LINE L1 -172 7789 7610 409 284 25 80 chr2 224480384 224480585 -28775998 - MIR SINE MIR -12 250 61 213 286 48 12 chr2 224480589 224480673 -28775910 + MIR SINE MIR 160 246 -16 189 0 0 0 chr2 224481861 224481882 -28774701 + (T)n Simple_repeat Simple_repeat 1 21 0 195 341 104 43 chr2 224482501 224482712 -28773871 - L2 LINE L2 -95 3177 2954 1969 163 118 22 chr2 224485163 224485611 -28770972 - L1MB1 LINE L1 -1 6167 5677 400 278 29 67 chr2 224485687 224485896 -28770687 - L1ME3A LINE L1 -129 6041 5841 291 339 58 23 chr2 224486622 224486793 -28769790 - L2 LINE L2 -924 2390 2214 7057 33 3 1 chr2 224488463 224489311 -28767272 - L1PA4 LINE L1 -4 6151 5302 314 327 60 90 chr2 224489447 224489747 -28766836 + L2 LINE L2 2965 3255 -17 193 348 0 0 chr2 224490391 224490437 -28766146 - L2 LINE L2 -22 3250 3205 216 0 0 0 chr2 224490607 224490631 -28765952 + (TC)n Simple_repeat Simple_repeat 1 24 0 198 0 0 0 chr2 224490630 224490652 -28765931 + (CA)n Simple_repeat Simple_repeat 1 22 0 * 21 36 0 0 chr2 224490672 224490700 -28765883 + AT_rich Low_complexity Low_complexity 1 28 0 269 151 19 0 chr2 224490801 224490854 -28765729 + (CATATA)n Simple_repeat Simple_repeat 3 56 0 335 302 99 17 chr2 224491297 224491469 -28765114 + L1ME LINE L1 867 1052 -5067 2277 108 0 0 chr2 224491824 224492119 -28764464 - AluSx SINE Alu -17 295 1 223 149 40 27 chr2 224492133 224492207 -28764376 + (TATAA)n Simple_repeat Simple_repeat 1 75 0 2681 182 72 64 chr2 224492207 224492345 -28764238 + Charlie1a DNA MER1_type 77 212 -2549 3032 180 90 10 chr2 224492345 224492957 -28763626 - MER67B LTR ERV1 0 661 1 2681 182 72 64 chr2 224492957 224493680 -28762903 + Charlie1a DNA MER1_type 212 1017 -438 253 280 206 23 chr2 224493683 224494155 -28762428 + L1ME LINE L1 4084 4641 -1488 321 284 14 43 chr2 224494536 224494744 -28761839 + L1ME3A LINE L1 4395 4596 -1550 1326 32 0 0 chr2 224494749 224494924 -28761659 + L1PA3 LINE L1 5997 6171 0 2611 100 11 0 chr2 224494926 224495297 -28761286 + L1PB1 LINE L1 5777 6151 0 780 264 39 23 chr2 224495378 224495636 -28760947 - MIR SINE MIR 0 262 1 25 0 0 0 chr2 224495903 224495928 -28760655 + AT_rich Low_complexity Low_complexity 1 25 0 527 231 8 52 chr2 224495973 224496107 -28760476 - MER63A DNA MER1_type -35 175 48 827 317 57 22 chr2 224496146 224496641 -28759942 + L1ME3A LINE L1 5433 5944 -226 207 281 16 0 chr2 224496660 224496724 -28759859 + (TATATG)n Simple_repeat Simple_repeat 2 66 0 281 301 63 18 chr2 224496744 224496932 -28759651 + L1ME LINE L1 5438 5642 -462 186 43 0 0 chr2 224496932 224496955 -28759628 + (CA)n Simple_repeat Simple_repeat 2 24 0 1479 178 89 68 chr2 224497660 224498042 -28758541 - MLT1B LTR MaLR 0 390 1 284 306 0 0 chr2 224498308 224498380 -28758203 + tRNA-Ile-ATT tRNA tRNA 3 74 -3 1412 240 7 0 chr2 224498815 224499094 -28757489 + Tigger7 DNA MER2_type 1 281 -2206 1006 175 22 0 chr2 224499090 224499273 -28757310 + Tigger7 DNA MER2_type 2400 2586 -1 * 902 279 169 37 chr2 224499689 224500198 -28756385 - MLT1K LTR MaLR -10 578 3 2187 100 17 0 chr2 224501616 224501906 -28754677 + AluSx SINE Alu 1 295 -17 1288 80 65 0 chr2 224502014 224502117 -28754466 + L1PA8A LINE L1 5869 5964 -167 288 0 0 0 chr2 224502117 224502149 -28754434 + (CA)n Simple_repeat Simple_repeat 2 33 0 1288 80 65 0 chr2 224502149 224502246 -28754337 + L1PA8A LINE L1 5964 6082 -49 270 56 0 0 chr2 224502476 224502512 -28754071 + (A)n Simple_repeat Simple_repeat 1 36 0 734 167 154 19 chr2 224502512 224502674 -28753909 - AluJo SINE Alu -124 188 5 2156 107 3 3 chr2 224502690 224502979 -28753604 - AluSx SINE Alu -23 289 1 408 259 74 19 chr2 224502981 224503143 -28753440 - HAL1 LINE L1 -759 1748 1578 661 153 0 125 chr2 224503189 224503365 -28753218 + MER5C DNA MER1_type 1 154 -170 740 189 119 20 chr2 224503383 224503810 -28752773 - MER69 DNA AcHobo -81 2445 1937 278 247 99 25 chr2 224503795 224503876 -28752707 - MER69 DNA AcHobo -1136 90 4 * 353 322 141 38 chr2 224504953 224505428 -28751155 - L2 LINE L2 -193 3079 2555 257 397 25 25 chr2 224505661 224505782 -28750801 + L2 LINE L2 3140 3260 -12 352 279 64 55 chr2 224506217 224506436 -28750147 + L2 LINE L2 2687 2907 -407 207 0 0 0 chr2 224506683 224506706 -28749877 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2273 62 0 0 chr2 224506708 224506982 -28749601 - AluY SINE Alu -26 285 12 445 280 109 6 chr2 224507159 224507334 -28749249 + MIR SINE MIR 7 199 -63 308 262 140 0 chr2 224507316 224507423 -28749160 - MIR SINE MIR -129 133 12 * 23 0 0 0 chr2 224507431 224507454 -28749129 + AT_rich Low_complexity Low_complexity 1 23 0 281 267 76 9 chr2 224509943 224510048 -28746535 - MIR3 SINE MIR -15 193 82 226 331 97 0 chr2 224510094 224510218 -28746365 + HAL1 LINE L1 2 137 -2370 194 315 19 0 chr2 224510691 224510745 -28745838 - L2 LINE L2 -86 3186 3132 1814 137 115 3 chr2 224510759 224511073 -28745510 + MER47A DNA MER2_type 18 366 0 966 209 61 61 chr2 224511428 224511481 -28745102 - L1ME2 LINE L1 -18 6146 6094 1664 201 0 7 chr2 224511481 224511779 -28744804 - AluJb SINE Alu -16 296 1 966 209 61 61 chr2 224511779 224512021 -28744562 - L1ME2 LINE L1 -69 6095 5851 931 272 113 64 chr2 224512102 224512599 -28743984 - MLT1G1 LTR MaLR 0 595 75 553 289 78 86 chr2 224512719 224513686 -28742897 + HAL1 LINE L1 853 1811 -696 1699 158 0 4 chr2 224514235 224514494 -28742089 + AluJb SINE Alu 3 260 -52 214 303 70 11 chr2 224514929 224515044 -28741539 - MIR SINE MIR -44 164 45 1243 34 0 0 chr2 224515464 224515613 -28740970 + L1PA4 LINE L1 6000 6148 -7 2208 124 0 0 chr2 224516138 224516445 -28740138 - AluSx SINE Alu -5 307 1 206 302 0 0 chr2 224517762 224517815 -28738768 - MIR3 SINE MIR -43 165 113 237 250 88 0 chr2 224518441 224518521 -28738062 + L1ME LINE L1 5743 5829 -333 419 215 85 39 chr2 224518545 224518675 -28737908 + MIR SINE MIR 78 213 -49 1777 114 114 14 chr2 224518748 224519029 -28737554 + AluSx SINE Alu 1 309 -3 291 233 186 0 chr2 224519056 224519142 -28737441 + MER99 DNA DNA 2 103 -725 2225 116 0 0 chr2 224519338 224519632 -28736951 - AluSx SINE Alu -18 294 1 742 218 31 6 chr2 224519895 224520244 -28736339 + MER99 DNA DNA 225 542 -286 709 206 0 37 chr2 224520282 224520418 -28736165 - FRAM SINE Alu -25 151 21 258 150 17 83 chr2 224520536 224520596 -28735987 - AluSp SINE Alu -119 184 129 489 153 10 31 chr2 224520603 224520701 -28735882 - FLAM SINE Alu -10 133 38 910 247 85 33 chr2 224520725 224520996 -28735587 + MER99 DNA DNA 539 823 -5 321 250 43 11 chr2 224521226 224521318 -28735265 - MER5A DNA MER1_type -29 160 66 250 305 34 17 chr2 224521228 224521346 -28735237 + MER5A DNA MER1_type 43 162 -27 * 1114 172 23 41 chr2 224523379 224523600 -28732983 + AluSx SINE Alu 1 217 -95 2157 107 26 47 chr2 224523770 224524153 -28732430 - THE1C LTR MaLR 0 375 1 368 298 124 6 chr2 224524430 224524652 -28731931 - Charlie8 DNA MER1_type -2145 272 7 244 113 94 0 chr2 224525521 224525574 -28731009 + L1ME4a LINE L1 5961 6018 -103 25286 38 5 0 chr2 224525869 224529755 -28726828 - L1PA4 LINE L1 -1 6154 2254 207 105 0 26 chr2 224529941 224529979 -28726604 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2346 104 0 0 chr2 224529985 224530294 -28726289 - AluSg SINE Alu -1 309 1 977 120 0 0 chr2 224530297 224530430 -28726153 - AluSq/x SINE Alu -179 133 1 1345 188 32 14 chr2 224530625 224530907 -28725676 + L1M4 LINE L1 5419 5705 -479 22 35 0 0 chr2 224530908 224530937 -28725646 + AT_rich Low_complexity Low_complexity 1 29 0 203 156 0 0 chr2 224531261 224531293 -28725290 + A-rich Low_complexity Low_complexity 2 33 0 624 189 22 78 chr2 224531382 224531562 -28725021 - MLT1J LTR MaLR 0 511 342 335 253 191 31 chr2 224531643 224531805 -28724778 - MLT1J LTR MaLR -323 188 1 528 304 92 31 chr2 224532200 224532536 -28724047 + MLT1G LTR MaLR 16 366 -176 26 0 0 0 chr2 224533389 224533415 -28723168 + AT_rich Low_complexity Low_complexity 1 26 0 5575 261 79 24 chr2 224533783 224535551 -28721032 + L1MA4 LINE L1 8 1871 -4978 421 333 76 23 chr2 224536679 224536850 -28719733 + MIR3 SINE MIR 20 199 -9 9692 179 30 39 chr2 224538038 224538360 -28718223 + L1MA4 LINE L1 1854 2178 -4824 2297 81 3 0 chr2 224538360 224538645 -28717938 + AluY SINE Alu 1 286 -25 270 56 0 0 chr2 224538649 224538685 -28717898 + (TAA)n Simple_repeat Simple_repeat 3 38 0 9692 179 30 39 chr2 224538685 224539080 -28717503 + L1MA4 LINE L1 2181 2578 -4424 2240 160 64 0 chr2 224539080 224539241 -28717342 - MSTB1 LTR MaLR 0 432 283 210 37 0 0 chr2 224539241 224539268 -28717315 + (CAA)n Simple_repeat Simple_repeat 2 28 0 2240 160 64 0 chr2 224539268 224539512 -28717071 - MSTB1 LTR MaLR -149 283 1 9692 179 30 39 chr2 224539512 224544087 -28712496 + L1MA4 LINE L1 2578 6996 -6 313 343 101 9 chr2 224544390 224544581 -28712002 - MIR SINE MIR -58 204 4 266 191 0 0 chr2 224545537 224545579 -28711004 - 5S rRNA rRNA -79 42 1 306 0 0 0 chr2 224545786 224545820 -28710763 + (A)n Simple_repeat Simple_repeat 1 34 0 313 99 44 22 chr2 224546460 224546551 -28710032 + (GGGTG)n Simple_repeat Simple_repeat 4 96 0 282 29 0 0 chr2 224546781 224546816 -28709767 + (A)n Simple_repeat Simple_repeat 1 35 0 444 313 116 22 chr2 224548753 224548977 -28707606 + MIR SINE MIR 3 247 -15 24 0 0 0 chr2 224549948 224549972 -28706611 + AT_rich Low_complexity Low_complexity 1 24 0 771 274 158 50 chr2 224551097 224551963 -28704620 + HAL1 LINE L1 1548 2507 0 2023 124 7 7 chr2 224552023 224552314 -28704269 - AluSc SINE Alu -18 291 1 22 0 0 0 chr2 224552574 224552596 -28703987 + AT_rich Low_complexity Low_complexity 1 22 0 316 282 73 32 chr2 224552918 224553042 -28703541 + L2 LINE L2 3160 3288 -25 1782 182 10 0 chr2 224553285 224553593 -28702990 + AluJo SINE Alu 1 311 -1 21 0 0 0 chr2 224553626 224553647 -28702936 + AT_rich Low_complexity Low_complexity 1 21 0 232 349 67 7 chr2 224554296 224554445 -28702138 + MER117 DNA MER1_type 2 159 -38 314 261 50 76 chr2 224554632 224554751 -28701832 + MIR3 SINE MIR 65 180 -28 1610 88 22 18 chr2 224555034 224555262 -28701321 + AluSg/x SINE Alu 77 305 -5 261 311 50 0 chr2 224555290 224555409 -28701174 + L1ME LINE L1 5731 5855 -266 3115 220 113 35 chr2 224555541 224556831 -28699752 + L1PB1 LINE L1 6 1540 -5323 661 140 0 0 chr2 224556831 224556931 -28699652 - LTR12 LTR ERV1 0 714 615 355 214 11 0 chr2 224556934 224557023 -28699560 - LTR30 LTR ERV1 -80 642 553 1543 116 31 54 chr2 224557024 224557356 -28699227 - LTR12 LTR ERV1 -429 1683 57 229 289 0 0 chr2 224557356 224557408 -28699175 - LTR30 LTR ERV1 -670 52 1 14292 190 30 22 chr2 224557409 224557957 -28698626 + L1PB1 LINE L1 1538 2080 -4787 2850 6 0 3 chr2 224557957 224558270 -28698313 + AluYb8 SINE Alu 1 312 -6 14292 190 30 22 chr2 224558270 224561411 -28695172 + L1PB1 LINE L1 2080 5304 -1563 4977 25 2 28 chr2 224561411 224562011 -28694572 + L1PA3 LINE L1 5561 6152 -3 14292 190 30 22 chr2 224562011 224563588 -28692995 + L1PB1 LINE L1 5304 6867 0 22 35 0 0 chr2 224565697 224565726 -28690857 + AT_rich Low_complexity Low_complexity 1 29 0 6259 79 22 38 chr2 224567599 224568754 -28687829 + SVA Other Other 430 1386 0 1821 78 8 0 chr2 224568868 224569170 -28687413 + L1PA4 LINE L1 5895 6198 0 971 328 68 24 chr2 224570117 224570574 -28686009 - L2 LINE L2 -1 3312 2836 287 269 26 13 chr2 224571051 224571129 -28685454 + MIR SINE MIR 74 152 -110 21 0 0 0 chr2 224571499 224571520 -28685063 + AT_rich Low_complexity Low_complexity 1 21 0 2758 237 23 12 chr2 224572228 224572873 -28683710 + MER82 DNA MER2_type 2 653 0 353 333 44 37 chr2 224572874 224573009 -28683574 - MIR SINE MIR -110 152 17 25 0 0 0 chr2 224573510 224573535 -28683048 + AT_rich Low_complexity Low_complexity 1 25 0 317 208 23 12 chr2 224574445 224574535 -28682048 - Charlie8 DNA MER1_type 0 2417 241 22 0 0 0 chr2 224574554 224574576 -28682007 + AT_rich Low_complexity Low_complexity 1 22 0 271 260 240 10 chr2 224574654 224574750 -28681833 - MIR3 SINE MIR -49 159 42 1545 181 0 14 chr2 224576202 224576478 -28680105 + AluJo SINE Alu 1 272 -40 21 0 0 0 chr2 224576582 224576603 -28679980 + AT_rich Low_complexity Low_complexity 1 21 0 2025 147 43 0 chr2 224577844 224578190 -28678393 - MER46B DNA MER2_type 0 236 1 2351 101 0 0 chr2 224581138 224581445 -28675138 - AluY SINE Alu -4 307 1 356 330 74 28 chr2 224581765 224581941 -28674642 - MIR3 SINE MIR -6 202 19 1476 172 92 27 chr2 224581954 224582292 -28674291 - MER46B DNA MER2_type -1 235 1 593 239 0 0 chr2 224582970 224583087 -28673496 - LTR48 LTR ERV1 -627 160 44 22 35 0 0 chr2 224583420 224583449 -28673134 + AT_rich Low_complexity Low_complexity 1 29 0 234 233 105 43 chr2 224584176 224584321 -28672262 - L1ME LINE L1 -357 5764 5601 223 296 25 25 chr2 224584767 224584848 -28671735 + L3b LINE CR1 1262 1342 -241 405 206 0 0 chr2 224585741 224585809 -28670774 + FLAM_A SINE Alu 1 68 -74 546 269 82 30 chr2 224586912 224587084 -28669499 - L1MD2 LINE L1 -13 6346 6154 1806 118 81 0 chr2 224587084 224587355 -28669228 - AluSg SINE Alu -17 293 1 546 269 82 30 chr2 224587355 224587450 -28669133 - L1MD2 LINE L1 -205 6154 6065 2433 76 0 3 chr2 224588122 224588426 -28668157 - AluY SINE Alu -8 303 1 5844 24 0 2 chr2 224590224 224591154 -28665429 + L1PA4 LINE L1 5016 5943 -212 443 221 8 8 chr2 224591264 224591386 -28665197 - L1 LINE L1 -2797 3349 3228 2004 145 6 16 chr2 224591396 224591707 -28664876 - AluSx SINE Alu -4 308 1 451 250 259 9 chr2 224591875 224592095 -28664488 + L2 LINE L2 2243 2517 -797 308 278 150 94 chr2 224592100 224592514 -28664069 + L2 LINE L2 2862 3298 -15 210 277 0 0 chr2 224592548 224592595 -28663988 + L2 LINE L2 3219 3265 -7 22 0 0 0 chr2 224592644 224592666 -28663917 + AT_rich Low_complexity Low_complexity 1 22 0 249 252 122 70 chr2 224593378 224593493 -28663090 - MIR3 SINE MIR -3 205 85 265 299 49 56 chr2 224593876 224594020 -28662563 - L2 LINE L2 -1334 1980 1838 302 197 91 0 chr2 224594531 224594597 -28661986 + AluJ/FRAM SINE Alu 228 299 -3 286 341 33 0 chr2 224595565 224595656 -28660927 + L3b LINE CR1 1404 1497 -86 950 137 137 0 chr2 224596314 224596489 -28660094 + MSTA LTR MaLR 1 199 -229 4971 96 9 1 chr2 224596489 224597230 -28659353 + L1PB1 LINE L1 5405 6151 0 666 171 59 38 chr2 224597248 224597454 -28659129 + THE1C LTR MaLR 183 375 0 2013 140 0 3 chr2 224598148 224598470 -28658113 - AluSx SINE Alu 0 321 1 320 254 58 90 chr2 224598875 224599064 -28657519 - MER102b DNA MER1_type -10 331 149 225 196 143 18 chr2 224600751 224600807 -28655776 - L2 LINE L2 -4 3268 3206 935 172 0 0 chr2 224601154 224601323 -28655260 + MER2 DNA MER2_type 42 210 -135 541 125 11 0 chr2 224602285 224602373 -28654210 + LTR9 LTR ERV1 438 526 -86 261 0 0 0 chr2 224602563 224602592 -28653991 + (TG)n Simple_repeat Simple_repeat 2 30 0 929 146 0 115 chr2 224602616 224602842 -28653741 - MER34B LTR ERV1 -365 200 1 2177 122 0 13 chr2 224603475 224603786 -28652797 + AluSg1 SINE Alu 3 309 0 208 214 54 0 chr2 224603951 224604007 -28652576 + CT-rich Low_complexity Low_complexity 1 59 0 779 147 0 0 chr2 224604446 224604562 -28652021 - FLAM_C SINE Alu -19 124 9 24 32 0 0 chr2 224605382 224605413 -28651170 + AT_rich Low_complexity Low_complexity 1 31 0 1824 159 10 14 chr2 224605561 224605857 -28650726 - AluJo SINE Alu -17 295 1 198 0 0 0 chr2 224607317 224607339 -28649244 + (T)n Simple_repeat Simple_repeat 1 22 0 2142 126 10 0 chr2 224607868 224608169 -28648414 - AluSx SINE Alu -8 304 1 220 306 0 0 chr2 224608355 224608404 -28648179 + MIR SINE MIR 73 121 -87 1860 141 0 24 chr2 224608426 224608716 -28647867 + AluJo SINE Alu 6 288 -24 688 170 0 9 chr2 224608847 224608959 -28647624 - FLAM_A SINE Alu -18 124 14 181 217 0 0 chr2 224608964 224609010 -28647573 + MIR SINE MIR 89 134 -128 1095 226 94 9 chr2 224609022 224609341 -28647242 - MLT1A2 LTR MaLR -9 365 20 239 296 0 25 chr2 224609346 224609427 -28647156 + MIR SINE MIR 149 227 -35 338 330 129 51 chr2 224609439 224609851 -28646732 - L2 LINE L2 -1 3271 2828 301 309 110 87 chr2 224610616 224611143 -28645440 + L1M2 LINE L1 595 1133 -5716 262 321 62 12 chr2 224611646 224611808 -28644775 - MER5A DNA MER1_type 0 189 20 2433 60 3 0 chr2 224612400 224612702 -28643881 - AluY SINE Alu -8 303 1 457 246 62 23 chr2 224613141 224613271 -28643312 - L2 LINE L2 0 3313 3179 671 225 135 0 chr2 224613671 224613849 -28642734 - MER58C DNA MER1_type -1 214 13 2244 126 0 0 chr2 224613937 224614238 -28642345 - AluSx SINE Alu -11 301 1 401 272 154 29 chr2 224615120 224615256 -28641327 + MIR SINE MIR 2 154 -108 2265 96 0 0 chr2 224615656 224615949 -28640634 - AluSg SINE Alu -17 293 1 340 285 9 0 chr2 224616151 224616256 -28640327 + MIR3 SINE MIR 93 199 -9 293 118 20 0 chr2 224616272 224616323 -28640260 - L1ME3A LINE L1 -15 6155 6104 8314 49 9 0 chr2 224616977 224617937 -28638646 - LTR5 LTR ERVK 0 969 1 1235 175 8 0 chr2 224618334 224618574 -28638009 - Tigger5 DNA MER2_type 0 2323 2082 378 191 32 32 chr2 224619028 224619122 -28637461 - MIR SINE MIR -56 206 113 * 424 306 16 8 chr2 224619117 224619241 -28637342 + L2 LINE L2 3148 3272 0 259 237 0 17 chr2 224620098 224620157 -28636426 + CT-rich Low_complexity Low_complexity 2 59 0 2272 96 13 0 chr2 224620580 224620881 -28635702 - AluSq SINE Alu -8 305 1 2902 189 123 14 chr2 224621038 224621748 -28634835 + LTR48 LTR ERV1 1 787 0 378 303 108 15 chr2 224621965 224622160 -28634423 - L2 LINE L2 -2 3311 3099 2127 129 7 0 chr2 224622446 224622748 -28633835 - AluSx SINE Alu -8 304 1 280 131 434 0 chr2 224622977 224623099 -28633484 + MER63C DNA MER1_type 255 429 -501 1998 126 7 0 chr2 224623100 224623385 -28633198 + AluSx SINE Alu 1 287 -25 225 183 17 17 chr2 224623424 224623484 -28633099 + MER63C DNA MER1_type 414 473 -457 1301 106 15 0 chr2 224623508 224623706 -28632877 - L1PB1 LINE L1 -3 6148 5948 471 233 57 13 chr2 224623706 224623865 -28632718 + MER63C DNA MER1_type 459 624 -306 * 1543 200 46 37 chr2 224623862 224624316 -28632267 + MER63C DNA MER1_type 473 930 0 422 182 0 0 chr2 224624665 224624742 -28631841 + MER116 DNA Mariner 1 77 -3 394 353 29 6 chr2 224625202 224625372 -28631211 + MIR SINE MIR 18 191 -71 2409 115 25 3 chr2 224625610 224625966 -28630617 - THE1B LTR MaLR 0 364 1 309 270 30 0 chr2 224625966 224626066 -28630517 - L1MCa LINE L1 -4362 2064 1962 392 239 128 8 chr2 224626111 224626228 -28630355 - MIR SINE MIR -8 254 124 350 289 74 53 chr2 224628116 224628306 -28628277 - MIR SINE MIR -67 195 2 863 149 0 58 chr2 224629728 224629882 -28626701 + AluSg/x SINE Alu 136 280 -30 479 270 92 41 chr2 224630006 224630202 -28626381 - MIR SINE MIR -26 236 31 922 295 33 0 chr2 224631031 224631272 -28625311 + MIR SINE MIR 2 250 -12 2222 95 0 0 chr2 224633102 224633387 -28623196 - AluSx SINE Alu -27 285 1 2208 57 0 0 chr2 224633667 224633930 -28622653 - AluY SINE Alu -10 301 39 396 297 102 43 chr2 224634178 224634434 -28622149 + L1M4 LINE L1 3602 3872 -2274 680 121 0 0 chr2 224634449 224634548 -28622035 + FLAM_C SINE Alu 37 135 -8 354 270 106 51 chr2 224634550 224634824 -28621759 + L1M4 LINE L1 3890 4178 -1968 1638 151 111 0 chr2 224634951 224635275 -28621308 + MER46B DNA MER2_type 1 235 -1 246 313 31 0 chr2 224635773 224635869 -28620714 + L2 LINE L2 2544 2642 -672 185 237 93 108 chr2 224637101 224637240 -28619343 - L2 LINE L2 -1 3312 3176 535 341 36 65 chr2 224637337 224637724 -28618859 - L2 LINE L2 -345 2969 2594 734 188 133 0 chr2 224637935 224638116 -28618467 - MER3 DNA MER1_type -4 205 1 305 334 77 15 chr2 224638287 224638469 -28618114 - MIR SINE MIR -56 152 12 207 186 0 0 chr2 224638622 224638665 -28617918 + (CA)n Simple_repeat Simple_repeat 2 44 0 995 218 109 34 chr2 224639469 224639715 -28616868 + MER2 DNA MER2_type 1 278 -67 2690 113 2 5 chr2 224639715 224640124 -28616459 - L1PA14 LINE L1 -3 6158 5751 995 218 109 34 chr2 224640124 224640198 -28616385 + MER2 DNA MER2_type 278 345 0 2226 165 31 12 chr2 224641505 224641929 -28614654 - LTR24 LTR ERV1 -35 432 1 305 274 53 35 chr2 224642983 224643096 -28613487 - L2 LINE L2 -240 3032 2918 1003 256 70 48 chr2 224643536 224643570 -28613013 - MER34B LTR ERV1 -3 539 507 2038 122 10 14 chr2 224643570 224643865 -28612718 - AluSx SINE Alu -18 294 1 1003 256 70 48 chr2 224643865 224644355 -28612228 - MER34B LTR ERV1 -35 507 1 2042 175 88 8 chr2 224644518 224644918 -28611665 - MSTB1 LTR MaLR 0 432 1 6929 221 81 3 chr2 224644919 224645432 -28611151 - MSTB1-int LTR MaLR 0 1651 1179 3448 55 0 9 chr2 224645432 224645884 -28610699 - LTR7 LTR ERV1 -2 448 1 6929 221 81 3 chr2 224645884 224646897 -28609686 - MSTB1-int LTR MaLR -472 1179 6 1979 185 81 17 chr2 224646902 224647308 -28609275 - MSTB1 LTR MaLR 0 432 1 1575 188 29 23 chr2 224647490 224647584 -28608999 + AluJo SINE Alu 1 93 -219 1789 147 147 21 chr2 224647584 224647964 -28608619 + MSTA LTR MaLR 1 428 0 1575 188 29 23 chr2 224647964 224648204 -28608379 + AluJo SINE Alu 93 312 0 1339 222 23 86 chr2 224648369 224648856 -28607727 + MER39 LTR ERV1 250 705 -2 257 344 10 0 chr2 224648902 224648998 -28607585 - MIR SINE MIR -20 242 146 21 36 0 0 chr2 224649597 224649625 -28606958 + AT_rich Low_complexity Low_complexity 1 28 0 2191 263 35 18 chr2 224649852 224650517 -28606066 + L2 LINE L2 1902 2577 -737 833 177 181 51 chr2 224650520 224650666 -28605917 - MER93a LTR ERV1 0 402 276 2158 121 0 0 chr2 224650666 224650963 -28605620 + AluSc SINE Alu 2 298 -11 833 177 181 51 chr2 224650963 224651053 -28605530 - MER93a LTR ERV1 -126 276 106 211 146 0 24 chr2 224651069 224651110 -28605473 + (TA)n Simple_repeat Simple_repeat 1 40 0 643 279 28 19 chr2 224651138 224651353 -28605230 - MERVL LTR ERVL -3637 2127 1911 648 152 120 0 chr2 224651360 224651485 -28605098 - MER93b LTR ERV1 -227 146 7 335 296 11 0 chr2 224651487 224651575 -28605008 + L2 LINE L2 2570 2658 -656 821 250 52 24 chr2 224651579 224651831 -28604752 - LTR16C LTR ERVL -2 489 231 479 250 64 6 chr2 224651838 224651994 -28604589 - MERVL LTR ERVL -2471 3014 2850 1141 138 11 16 chr2 224652578 224652795 -28603788 - AluSq SINE Alu 0 313 112 2181 329 55 31 chr2 224652795 224654333 -28602250 - MERVL LTR ERVL -2886 2878 1192 314 325 70 32 chr2 224654406 224654575 -28602008 - MERVL LTR ERVL -3908 1088 927 561 99 0 0 chr2 224654575 224654656 -28601927 + (TA)n Simple_repeat Simple_repeat 1 81 0 314 325 70 32 chr2 224654656 224654831 -28601752 - MERVL LTR ERVL -4069 927 731 2349 95 3 0 chr2 224655961 224656265 -28600318 + AluSx SINE Alu 1 305 -7 27 49 0 0 chr2 224657905 224657946 -28598637 + AT_rich Low_complexity Low_complexity 1 41 0 2256 116 0 0 chr2 224657949 224658243 -28598340 + AluSg SINE Alu 1 294 -16 1172 169 64 21 chr2 224658514 224658750 -28597833 - AluJo SINE Alu -58 254 9 12887 137 87 5 chr2 224659974 224662209 -28594374 - Tigger1 DNA MER2_type 0 2418 1 267 314 178 8 chr2 224663060 224663178 -28593405 - L2 LINE L2 -579 2735 2598 1576 250 134 16 chr2 224663183 224663727 -28592856 + MLT1E2 LTR MaLR 19 626 0 2030 122 11 0 chr2 224664418 224664697 -28591886 + AluSx SINE Alu 1 282 -30 28 0 0 0 chr2 224664724 224664752 -28591831 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr2 224664851 224664886 -28591697 + AT_rich Low_complexity Low_complexity 1 35 0 528 281 7 14 chr2 224665165 224665304 -28591279 + MER58B DNA MER1_type 204 341 0 1365 196 134 7 chr2 224665696 224666002 -28590581 + MER2 DNA MER2_type 1 345 0 306 208 130 0 chr2 224668168 224668245 -28588338 - L2 LINE L2 0 3313 3227 855 206 96 70 chr2 224668264 224668608 -28587975 + L1ME3A LINE L1 4390 4742 -1404 569 228 76 43 chr2 224668732 224668916 -28587667 + L1ME3A LINE L1 5861 6050 -120 37 69 0 0 chr2 224668958 224669030 -28587553 + AT_rich Low_complexity Low_complexity 1 72 0 364 309 0 0 chr2 224669169 224669266 -28587317 - L2 LINE L2 -239 3074 2978 402 343 71 0 chr2 224669275 224669444 -28587139 - L2 LINE L2 -581 2733 2553 1140 252 0 0 chr2 224669531 224669769 -28586814 + MER8 DNA MER2_type 2 239 0 2517 76 0 0 chr2 224669839 224670167 -28586416 + L1PA8 LINE L1 5768 6095 -77 6906 50 16 1 chr2 224670167 224671536 -28585047 + L1PA7 LINE L1 4787 6154 0 302 192 71 30 chr2 224671670 224671769 -28584814 + MER34 LTR ERV1 433 535 -7 192 206 15 103 chr2 224671928 224671996 -28584587 + L2 LINE L2 3207 3268 -4 239 342 36 36 chr2 224672042 224672153 -28584430 - MIR3 SINE MIR -6 202 92 188 65 0 32 chr2 224672219 224672250 -28584333 + (GAAA)n Simple_repeat Simple_repeat 2 31 0 218 136 23 0 chr2 224672419 224672463 -28584120 + GA-rich Low_complexity Low_complexity 2 46 0 22 0 0 0 chr2 224673572 224673594 -28582989 + AT_rich Low_complexity Low_complexity 1 22 0 211 284 119 0 chr2 224675179 224675246 -28581337 - MIR3 SINE MIR -5 203 129 25 0 0 28 chr2 224675726 224675748 -28580835 + AT_rich Low_complexity Low_complexity 1 23 -12 1569 154 3 66 chr2 224675748 224676066 -28580517 + AluJo SINE Alu 1 298 -14 25 0 0 28 chr2 224676066 224676079 -28580504 + AT_rich Low_complexity Low_complexity 23 35 0 220 220 60 20 chr2 224676224 224676274 -28580309 + MIR3 SINE MIR 114 165 -43 1895 163 150 25 chr2 224676749 224677155 -28579428 + MLT1C LTR MaLR 11 467 0 541 269 23 51 chr2 224678347 224678522 -28578061 + MIR3 SINE MIR 16 185 -23 460 169 105 40 chr2 224678545 224678669 -28577914 + FLAM_A SINE Alu 2 133 0 28 0 0 0 chr2 224678948 224678976 -28577607 + AT_rich Low_complexity Low_complexity 1 28 0 237 219 0 0 chr2 224679869 224679910 -28576673 - MIR3 SINE MIR -18 190 150 236 250 29 0 chr2 224680097 224680165 -28576418 - MIR3 SINE MIR -46 162 93 2189 179 137 21 chr2 224680266 224680471 -28576112 + Charlie1 DNA MER1_type 2070 2250 -511 1881 151 7 10 chr2 224680471 224680776 -28575807 + AluJo SINE Alu 1 304 -8 2189 179 137 21 chr2 224680776 224681190 -28575393 + Charlie1 DNA MER1_type 2250 2761 0 976 309 117 43 chr2 224681648 224682392 -28574191 - L2 LINE L2 -225 3088 2292 1997 162 89 25 chr2 224682769 224683208 -28573375 + MLT1C LTR MaLR 1 467 0 282 219 123 0 chr2 224683328 224683401 -28573182 + MIR SINE MIR 64 145 -63 582 223 8 15 chr2 224684016 224684146 -28572437 + MER94 DNA DNA 1 129 -5 231 114 0 0 chr2 224685266 224685301 -28571282 + (A)n Simple_repeat Simple_repeat 1 35 0 1934 152 7 0 chr2 224685340 224685636 -28570947 + AluSx SINE Alu 3 300 -12 1125 147 0 21 chr2 224685639 224685829 -28570754 + AluSg/x SINE Alu 118 303 -7 215 304 249 23 chr2 224686144 224686621 -28569962 + L2 LINE L2 1627 2211 -1103 979 182 0 0 chr2 224686901 224687060 -28569523 + FAM SINE Alu 9 167 -18 269 219 63 38 chr2 224687079 224687178 -28569405 + L1MC/D LINE L1 5573 5665 -469 404 236 24 108 chr2 224687181 224687393 -28569190 + HAL1 LINE L1 1404 1597 -910 404 260 94 43 chr2 224687431 224687666 -28568917 + HAL1 LINE L1 2256 2502 -5 363 235 12 0 chr2 224687699 224687780 -28568803 + L1MC/D LINE L1 5697 5778 -2030 1056 174 55 10 chr2 224688364 224688565 -28568018 - AluJo SINE Alu -16 296 87 237 330 38 9 chr2 224688820 224688926 -28567657 + LTR16C LTR ERVL 241 349 -142 2026 73 84 31 chr2 224689084 224689371 -28567212 - AluY SINE Alu -9 302 1 21 57 0 0 chr2 224689645 224689680 -28566903 + AT_rich Low_complexity Low_complexity 1 35 0 766 209 92 25 chr2 224690343 224690539 -28566044 - MER63A DNA MER1_type -1 209 1 235 230 140 50 chr2 224690602 224690702 -28565881 + MIR SINE MIR 56 164 -98 2473 200 63 4 chr2 224690844 224690886 -28565697 - MLT2B1 LTR ERVL 0 520 482 414 39 0 0 chr2 224690886 224690938 -28565645 + (TA)n Simple_repeat Simple_repeat 2 53 0 2473 200 63 4 chr2 224690938 224691386 -28565197 - MLT2B1 LTR ERVL -38 482 1 2159 83 4 4 chr2 224692366 224692642 -28563941 - AluY SINE Alu -10 301 26 1400 216 78 19 chr2 224692661 224692980 -28563603 + MLT1A1 LTR MaLR 15 352 -13 1555 181 130 8 chr2 224693395 224693748 -28562835 - MSTD LTR MaLR 0 396 1 314 343 75 7 chr2 224694331 224694522 -28562061 + MIR SINE MIR 18 220 -42 23 86 0 0 chr2 224694997 224695055 -28561528 + AT_rich Low_complexity Low_complexity 1 58 0 1305 76 0 12 chr2 224695843 224696014 -28560569 - AluY SINE Alu -11 300 132 418 201 0 119 chr2 224696034 224696168 -28560415 - MER34B LTR ERV1 -440 125 8 2743 121 28 17 chr2 224696348 224696810 -28559773 + MER50 LTR ERV1 12 478 -256 512 260 83 21 chr2 224696979 224697171 -28559412 - HAL1 LINE L1 -804 1703 1500 341 305 77 62 chr2 224697294 224697417 -28559166 - HAL1 LINE L1 -1002 1505 1385 2205 111 10 7 chr2 224697417 224697724 -28558859 - AluSx SINE Alu -4 308 1 341 305 77 62 chr2 224697724 224697859 -28558724 - HAL1 LINE L1 -1122 1385 1243 1751 170 14 0 chr2 224699226 224699503 -28557080 - AluJb SINE Alu -31 281 1 245 212 30 0 chr2 224699661 224699727 -28556856 - L1ME4a LINE L1 -76 6045 5978 738 162 54 7 chr2 224699918 224700066 -28556517 + L1MA3 LINE L1 9 163 -7402 204 40 0 0 chr2 224700095 224700120 -28556463 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 5632 162 9 5 chr2 224700120 224702090 -28554493 - L1PB1 LINE L1 -7 6144 4171 4617 169 8 1 chr2 224702089 224702966 -28553617 + L1MA3 LINE L1 4910 5792 -1773 * 6221 106 21 11 chr2 224702967 224703991 -28552592 + L1MA3 LINE L1 6690 7724 0 582 310 11 0 chr2 224704525 224704699 -28551884 + LTR16A LTR ERVL 52 227 -223 2517 208 27 39 chr2 224704705 224705326 -28551257 + MLT1E3 LTR MaLR 7 620 -4 809 256 117 7 chr2 224705352 224705625 -28550958 + HERV16 LTR ERVL 872 1174 -3822 * 1042 262 43 29 chr2 224705624 224705845 -28550738 + HERV16 LTR ERVL 2222 2452 -2544 1984 115 3 14 chr2 224705845 224706158 -28550425 + AluSx SINE Alu 1 310 0 1042 262 43 29 chr2 224706158 224706286 -28550297 + HERV16 LTR ERVL 2452 2577 -2419 313 127 0 32 chr2 224706286 224706349 -28550234 + LTR49 LTR ERV1 459 519 -76 365 272 54 14 chr2 224706371 224706518 -28550065 + HERV16 LTR ERVL 2573 2725 -2271 937 332 87 44 chr2 224706847 224707575 -28549008 + HERV16 LTR ERVL 3941 4729 -756 890 169 4 146 chr2 224707575 224707829 -28548754 + MER20 DNA MER1_type 2 219 0 937 332 87 44 chr2 224707829 224708141 -28548442 + HERV16 LTR ERVL 4729 5026 -459 366 316 19 0 chr2 224708349 224708507 -28548076 + HERV16 LTR ERVL 5175 5335 -319 1077 280 54 51 chr2 224708649 224708901 -28547682 + LTR16A LTR ERVL 16 271 -179 1318 202 40 56 chr2 224708901 224709203 -28547380 + AluJo SINE Alu 1 297 -15 1077 280 54 51 chr2 224709203 224709379 -28547204 + LTR16A LTR ERVL 271 445 -5 419 309 109 26 chr2 224709393 224709623 -28546960 - L2 LINE L2 -726 2588 2340 285 197 53 0 chr2 224709671 224709747 -28546836 - MER116 DNA Mariner 0 80 1 808 124 0 65 chr2 224710581 224710734 -28545849 - L1PA16 LINE L1 -1 6165 6023 7535 31 13 0 chr2 224710752 224711730 -28544853 - L1PA5 LINE L1 -3 6151 5171 491 223 23 15 chr2 224711844 224711974 -28544609 - MLT1I LTR MaLR 0 409 279 429 255 127 61 chr2 224712072 224712284 -28544299 - MLT1I LTR MaLR -176 233 8 1974 87 16 0 chr2 224712312 224712566 -28544017 - AluSg SINE Alu -3 307 50 1776 175 3 16 chr2 224712737 224713051 -28543532 - AluJb SINE Alu -2 310 1 713 252 74 31 chr2 224713275 224713692 -28542891 - L1M4 LINE L1 -5117 1517 1042 1627 181 32 18 chr2 224713711 224714023 -28542560 - AluJb SINE Alu 0 316 1 3842 102 35 8 chr2 224714077 224714673 -28541910 - L1PB2 LINE L1 0 6151 5540 1557 163 111 18 chr2 224714731 224715063 -28541520 - MLT2D LTR ERVL -51 363 1 375 186 0 0 chr2 224715063 224715133 -28541450 - ERVL-D LTR ERVL -7 5757 5688 659 123 37 37 chr2 224715178 224715340 -28541243 - ERVL-D LTR ERVL -184 5580 5419 874 282 92 41 chr2 224715435 224715847 -28540736 - LTR33 LTR ERVL -3 518 86 529 194 121 55 chr2 224715864 224716029 -28540554 + MER58A DNA MER1_type 45 220 -4 453 230 10 0 chr2 224716027 224716127 -28540456 - LTR33 LTR ERVL -420 101 1 * 906 287 18 18 chr2 224716145 224716476 -28540107 - L1MC/D LINE L1 -2144 5664 5334 1481 266 80 11 chr2 224716489 224717125 -28539458 - L1ME3 LINE L1 0 6162 5483 180 77 0 0 chr2 224717323 224717349 -28539234 + (TCTA)n Simple_repeat Simple_repeat 1 26 0 544 204 40 58 chr2 224717419 224717662 -28538921 - MLT1E1 LTR MaLR -228 426 96 497 178 0 0 chr2 224717638 224717728 -28538855 - MLT1E LTR MaLR -446 147 58 * 1644 332 75 22 chr2 224717987 224719087 -28537496 + ERVL LTR ERVL 1906 3064 -2700 369 279 0 0 chr2 224719565 224719669 -28536914 + MLT1E-int LTR MaLR 759 862 -509 371 310 22 88 chr2 224719691 224720010 -28536573 + MLT1E-int LTR MaLR 1074 1371 0 1155 275 106 29 chr2 224720044 224720198 -28536385 + MLT1E LTR MaLR 34 175 -418 3851 104 39 12 chr2 224720198 224720784 -28535799 - LTR43 LTR ERV1 0 602 1 1155 275 106 29 chr2 224720784 224721149 -28535434 + MLT1E LTR MaLR 175 593 0 197 153 34 68 chr2 224721171 224721230 -28535353 - MIR3 SINE MIR -41 167 111 269 226 16 0 chr2 224721346 224721408 -28535175 - MIR3 SINE MIR -23 185 123 1397 236 36 13 chr2 224721408 224721793 -28534790 + MARNA DNA Mariner 148 541 -45 326 244 74 22 chr2 224722186 224722321 -28534262 + MER117 DNA MER1_type 4 145 -52 1781 75 0 56 chr2 224722585 224722837 -28533746 + AluY SINE Alu 53 290 -21 1329 14 0 0 chr2 224723785 224723932 -28532651 - AluYb8 SINE Alu -16 302 156 291 183 0 17 chr2 224725907 224725967 -28530616 + MER69 DNA AcHobo 2 60 -2466 437 189 115 46 chr2 224725982 224726199 -28530384 - MER69 DNA AcHobo -798 1728 1497 233 114 0 0 chr2 224726376 224726411 -28530172 - MLT2B3 LTR ERVL 0 554 520 * 368 119 0 0 chr2 224726407 224726466 -28530117 - MLT2B3 LTR ERVL -495 59 1 2319 58 0 52 chr2 224726514 224726824 -28529759 + AluY SINE Alu 2 295 -16 2097 130 3 3 chr2 224727616 224727923 -28528660 + AluSq SINE Alu 1 307 -6 347 256 48 114 chr2 224728224 224728451 -28528132 + MER102a DNA MER1_type 87 298 -32 1712 174 7 10 chr2 224728613 224728906 -28527677 + AluJb SINE Alu 1 292 -20 396 202 26 18 chr2 224729443 224729557 -28527026 - MLT1G1 LTR MaLR -1 594 480 324 305 154 5 chr2 224729614 224729865 -28526718 - MLT1G1 LTR MaLR -286 304 2 2472 93 0 0 chr2 224730134 224730446 -28526137 - AluSq SINE Alu -1 312 1 754 277 53 5 chr2 224731637 224731843 -28524740 - MIR SINE MIR -34 228 13 1178 98 6 0 chr2 224731976 224732150 -28524433 + L1PA11 LINE L1 6000 6174 0 5413 123 19 48 chr2 224732377 224733352 -28523231 - HSMAR2 DNA Mariner -13 1289 343 2180 137 0 0 chr2 224733353 224733660 -28522923 - AluSx SINE Alu -5 307 1 233 139 0 0 chr2 224733665 224733708 -28522875 - HSMAR2 DNA Mariner -1256 46 4 437 318 60 0 chr2 224734297 224734448 -28522135 + MER5B DNA MER1_type 17 176 -2 821 172 38 0 chr2 224734496 224734653 -28521930 + MER58B DNA MER1_type 171 333 -8 2437 89 3 9 chr2 224734653 224734968 -28521615 + AluSp SINE Alu 1 313 0 888 232 18 23 chr2 224735105 224735325 -28521258 - MLT1J LTR MaLR -292 219 1 236 215 63 0 chr2 224735621 224735700 -28520883 + MER94 DNA DNA 3 86 -48 2693 192 186 4 chr2 224736348 224737057 -28519526 - MER45B DNA AcHobo -7 1033 196 1712 208 64 4 chr2 224737057 224737529 -28519054 - L1ME1 LINE L1 -260 5906 5407 214 271 0 57 chr2 224737563 224737633 -28518950 + L2 LINE L2 3126 3191 -81 24 0 0 0 chr2 224737666 224737690 -28518893 + AT_rich Low_complexity Low_complexity 1 24 0 236 326 139 0 chr2 224737856 224737942 -28518641 + L2 LINE L2 3175 3272 0 2047 111 40 10 chr2 224739511 224739808 -28516775 + AluSq SINE Alu 7 312 -1 254 158 18 0 chr2 224739808 224739854 -28516729 + A-rich Low_complexity Low_complexity 13 62 0 495 312 75 24 chr2 224740471 224740763 -28515820 - MLT1L LTR MaLR -109 506 200 2201 98 3 14 chr2 224742258 224742554 -28514029 + AluSg SINE Alu 1 293 -17 1084 183 48 0 chr2 224742683 224742913 -28513670 + L1MA7 LINE L1 6044 6284 -7 413 293 63 58 chr2 224743259 224743464 -28513119 - L2 LINE L2 -6 3307 3102 276 205 21 196 chr2 224743815 224744146 -28512437 - LTR38B LTR ERV1 -328 282 10 298 309 55 22 chr2 224744270 224744451 -28512132 - Charlie8 DNA MER1_type -2152 265 79 21 36 0 0 chr2 224745550 224745578 -28511005 + AT_rich Low_complexity Low_complexity 1 28 0 2838 7 0 0 chr2 224745648 224745953 -28510630 + AluYa5 SINE Alu 1 305 -6 1582 104 72 25 chr2 224746935 224747213 -28509370 - THE1C LTR MaLR 0 375 85 359 251 42 87 chr2 224747576 224747617 -28508966 - MER97c DNA MER1_type? 0 1090 1049 872 236 6 0 chr2 224747617 224747791 -28508792 - FAM SINE Alu 0 175 1 359 251 42 87 chr2 224747791 224748083 -28508500 - MER97c DNA MER1_type? -41 1049 772 1597 199 51 122 chr2 224748393 224748514 -28508069 - MER97b DNA MER1_type? -450 603 475 1593 168 4 22 chr2 224748514 224748788 -28507795 + AluJo SINE Alu 6 274 -38 1597 199 51 122 chr2 224748788 224748803 -28507780 - MER97b DNA MER1_type? -578 475 461 208 53 53 0 chr2 224748803 224748841 -28507742 + A-rich Low_complexity Low_complexity 5 44 0 1597 199 51 122 chr2 224748841 224749197 -28507386 - MER97b DNA MER1_type? -592 461 164 2268 115 73 3 chr2 224749197 224749537 -28507046 - THE1B LTR MaLR 0 364 1 1597 199 51 122 chr2 224749537 224749689 -28506894 - MER97b DNA MER1_type? -889 164 3 22 0 0 0 chr2 224750357 224750379 -28506204 + AT_rich Low_complexity Low_complexity 1 22 0 704 230 35 23 chr2 224751240 224751414 -28505169 + MER5B DNA MER1_type 3 178 0 211 241 0 35 chr2 224751545 224751603 -28504980 + (TTCA)n Simple_repeat Simple_repeat 3 58 0 591 238 77 18 chr2 224752045 224752213 -28504370 - MIR SINE MIR 0 262 85 2089 138 30 28 chr2 224752213 224752576 -28504007 - THE1B LTR MaLR 0 364 1 2155 110 0 3 chr2 224752724 224753016 -28503567 - AluSx SINE Alu -21 291 1 293 312 44 58 chr2 224753128 224753304 -28503279 + MER5A DNA MER1_type 6 189 0 1721 285 156 21 chr2 224755040 224755897 -28500686 + L2 LINE L2 1728 2700 -614 519 314 40 87 chr2 224755969 224756316 -28500267 - MLT1K LTR MaLR -171 417 87 2055 133 0 58 chr2 224756342 224756672 -28499911 + AluSx SINE Alu 1 311 -1 278 226 194 11 chr2 224756751 224756844 -28499739 + MIR SINE MIR 98 207 -55 4709 184 48 44 chr2 224757004 224757285 -28499298 + L1MB3 LINE L1 4096 4374 -1809 2000 138 50 0 chr2 224757285 224757583 -28499000 + AluSq SINE Alu 1 313 0 4709 184 48 44 chr2 224757583 224757620 -28498963 + L1MB3 LINE L1 4374 4409 -1774 1601 254 17 8 chr2 224757620 224757982 -28498601 + MLT1A1 LTR MaLR 1 365 0 4709 184 48 44 chr2 224757982 224758937 -28497646 + L1MB3 LINE L1 4409 5392 -791 2258 105 0 6 chr2 224758937 224759250 -28497333 + AluY SINE Alu 1 311 0 4709 184 48 44 chr2 224759250 224760041 -28496542 + L1MB3 LINE L1 5392 6179 -4 1818 219 107 52 chr2 224760253 224760814 -28495769 - MLT1E LTR MaLR -1 592 1 9385 136 15 22 chr2 224761779 224764333 -28492250 - L1MA3 LINE L1 0 6305 3758 3103 102 9 0 chr2 224764333 224764763 -28491820 + MER57B LTR ERV1 1 434 0 9385 136 15 22 chr2 224764763 224764848 -28491735 - L1MA3 LINE L1 -2547 3758 3674 1701 188 6 13 chr2 224766119 224766433 -28490150 - AluJo SINE Alu 0 312 1 2298 112 0 0 chr2 224766558 224766861 -28489722 + AluSg SINE Alu 1 303 -7 342 367 46 68 chr2 224767103 224767648 -28488935 - L2 LINE L2 -14 3258 2716 1478 213 0 30 chr2 224767883 224768188 -28488395 - AluJb SINE Alu -16 296 1 1929 153 0 7 chr2 224768322 224768655 -28487928 + AluJo SINE Alu 1 331 0 281 266 91 91 chr2 224769106 224769260 -28487323 - L2 LINE L2 0 3313 3160 417 293 18 29 chr2 224770173 224770398 -28486185 - L2 LINE L2 -278 2994 2770 219 394 84 32 chr2 224773595 224773844 -28482739 + L2 LINE L2 2368 2629 -685 1740 185 0 7 chr2 224774411 224774703 -28481880 + AluJo SINE Alu 1 290 -22 22 0 0 0 chr2 224774795 224774817 -28481766 + AT_rich Low_complexity Low_complexity 1 22 0 185 302 0 0 chr2 224774894 224774937 -28481646 - MIR SINE MIR -71 191 149 1068 227 55 0 chr2 224774937 224775157 -28481426 + Tigger7 DNA MER2_type 2 233 -500 609 217 0 0 chr2 224775159 224775265 -28481318 + Tigger7 DNA MER2_type 2382 2487 0 242 250 62 0 chr2 224775265 224775329 -28481254 - MIR SINE MIR -114 148 81 2318 101 3 0 chr2 224776086 224776394 -28480189 - AluSx SINE Alu -3 309 1 23181 80 9 8 chr2 224776852 224780967 -28475616 - L1PA7 LINE L1 0 6154 2040 21 0 0 0 chr2 224781069 224781090 -28475493 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 224781657 224781678 -28474905 + AT_rich Low_complexity Low_complexity 1 21 0 1689 154 9 38 chr2 224782026 224782344 -28474239 - AluJb SINE Alu -3 309 1 2074 132 3 6 chr2 224783028 224783339 -28473244 + AluSx SINE Alu 1 310 -2 359 202 11 0 chr2 224783728 224783822 -28472761 + (TA)n Simple_repeat Simple_repeat 2 96 0 2414 94 25 3 chr2 224784755 224785118 -28471465 + L1MA5 LINE L1 5924 6294 -6 24 0 0 0 chr2 224785124 224785148 -28471435 + AT_rich Low_complexity Low_complexity 1 24 0 320 231 0 0 chr2 224786164 224786229 -28470354 + MIR SINE MIR 189 253 -9 189 0 0 0 chr2 224788379 224788400 -28468183 + (TA)n Simple_repeat Simple_repeat 1 21 0 * 243 0 0 0 chr2 224788399 224788426 -28468157 + (CA)n Simple_repeat Simple_repeat 2 28 0 1679 119 61 64 chr2 224788993 224789337 -28467246 - MER2 DNA MER2_type 0 344 2 495 194 0 0 chr2 224789358 224789461 -28467122 + (TG)n Simple_repeat Simple_repeat 2 104 0 2027 143 7 0 chr2 224789532 224789826 -28466757 - AluSx SINE Alu -16 296 1 2162 106 21 0 chr2 224790504 224790787 -28465796 + AluSx SINE Alu 3 291 -21 586 122 14 2 chr2 224790822 224790921 -28465662 - L1MB1 LINE L1 -2 6169 6064 2500 69 0 0 chr2 224791232 224791537 -28465046 - AluSx SINE Alu -2 310 6 181 376 78 40 chr2 224791567 224791889 -28464694 + L2 LINE L2 2579 2912 -402 659 294 42 21 chr2 224792099 224792432 -28464151 - L1MC4a LINE L1 -1869 5939 5600 1717 157 69 4 chr2 224794421 224794695 -28461888 + AluJb SINE Alu 1 292 -20 185 247 65 52 chr2 224795408 224795485 -28461098 + MIR SINE MIR 185 262 0 398 314 63 19 chr2 224796946 224797105 -28459478 - MER5A DNA MER1_type -3 186 21 191 261 76 65 chr2 224799543 224799635 -28456948 + L2 LINE L2 3175 3267 -5 22 80 0 0 chr2 224799643 224799693 -28456890 + AT_rich Low_complexity Low_complexity 1 50 0 186 284 15 30 chr2 224801303 224801370 -28455213 + MIR3 SINE MIR 4 69 -139 16079 139 11 12 chr2 224801536 224802663 -28453920 + L1PA11 LINE L1 2584 3711 -2463 2058 96 7 36 chr2 224802663 224802966 -28453617 + AluSx SINE Alu 11 304 -8 16079 139 11 12 chr2 224802966 224805434 -28451149 + L1PA11 LINE L1 3711 6170 -4 183 242 48 48 chr2 224805638 224805700 -28450883 - MIR SINE MIR -109 153 92 190 206 0 0 chr2 224806297 224806331 -28450252 - MIR SINE MIR -143 65 32 204 373 10 0 chr2 224806744 224806846 -28449737 + MIR SINE MIR 154 256 -6 842 249 90 52 chr2 224807170 224807627 -28448956 - L1ME3A LINE L1 -88 6082 5609 409 186 97 26 chr2 224808638 224808751 -28447832 + L1ME4a LINE L1 5974 6094 -27 219 200 20 0 chr2 224809895 224809945 -28446638 + (TA)n Simple_repeat Simple_repeat 2 52 0 432 174 99 16 chr2 224809955 224810076 -28446507 - L1MD3 LINE L1 -4 7991 7861 1145 239 77 32 chr2 224810375 224811236 -28445347 - L1ME3A LINE L1 -14 6156 5173 1830 143 28 3 chr2 224811435 224811722 -28444861 - AluJo SINE Alu -18 294 1 1482 132 62 47 chr2 224811887 224812145 -28444438 - AluJb SINE Alu -50 262 1 306 247 165 0 chr2 224813480 224813577 -28443006 + MIR SINE MIR 92 204 -58 216 175 0 0 chr2 224813715 224813755 -28442828 + (CA)n Simple_repeat Simple_repeat 2 41 0 1748 170 3 7 chr2 224813984 224814284 -28442299 - AluSx SINE Alu -13 299 1 222 118 0 0 chr2 224816891 224816925 -28439658 + (T)n Simple_repeat Simple_repeat 1 34 0 268 298 44 53 chr2 224816934 224817048 -28439535 - L3 LINE CR1 -110 1467 1355 616 248 53 153 chr2 224818240 224818788 -28437795 + L2 LINE L2 2817 3309 -4 821 203 16 21 chr2 224819199 224819386 -28437197 + MER5A DNA MER1_type 1 186 -3 1971 113 50 13 chr2 224819837 224820138 -28436445 + AluSx SINE Alu 1 312 0 25 0 0 0 chr2 224820726 224820751 -28435832 + AT_rich Low_complexity Low_complexity 1 25 0 1470 141 3 133 chr2 224820784 224821131 -28435452 - AluJo SINE Alu 0 302 1 1034 268 42 68 chr2 224821678 224822393 -28434190 - L2 LINE L2 0 3313 2622 2441 66 3 3 chr2 224823115 224823416 -28433167 - AluY SINE Alu -10 301 1 374 352 121 25 chr2 224823440 224823926 -28432657 + L2 LINE L2 2166 2698 -616 286 200 56 33 chr2 224823989 224824079 -28432504 + L2 LINE L2 3182 3273 -40 2195 97 9 3 chr2 224824272 224824591 -28431992 + L1PA13 LINE L1 5841 6161 -2 495 345 30 9 chr2 224825161 224825393 -28431190 - Charlie8 DNA MER1_type -2124 293 57 297 246 72 0 chr2 224826420 224826489 -28430094 - tRNA-Ile-ATT tRNA tRNA -3 74 1 738 237 93 0 chr2 224827333 224827527 -28429056 - L1ME1 LINE L1 -48 6118 5907 40 40 0 26 chr2 224827889 224827917 -28428666 + AT_rich Low_complexity Low_complexity 1 28 -46 2227 92 0 0 chr2 224827917 224828200 -28428383 + AluSx SINE Alu 1 283 -29 237 65 0 0 chr2 224828200 224828231 -28428352 + (TA)n Simple_repeat Simple_repeat 2 32 0 40 40 0 26 chr2 224828231 224828277 -28428306 + AT_rich Low_complexity Low_complexity 26 74 0 207 0 0 0 chr2 224829657 224829680 -28426903 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1358 73 6 0 chr2 224830876 224831054 -28425529 + L1PA7 LINE L1 5965 6143 -11 2389 76 0 13 chr2 224831181 224831496 -28425087 + AluY SINE Alu 1 311 0 180 0 0 0 chr2 224831543 224831563 -28425020 + (T)n Simple_repeat Simple_repeat 1 20 0 1987 118 3 21 chr2 224831600 224831917 -28424666 + AluSq SINE Alu 1 312 0 457 298 38 25 chr2 224834479 224834637 -28421946 + MIR3 SINE MIR 3 162 -46 510 274 79 6 chr2 224834733 224834897 -28421686 - MER104 DNA Tc2 -3 177 2 188 340 82 31 chr2 224834977 224835074 -28421509 - MIR SINE MIR -87 121 20 1007 92 8 0 chr2 224837348 224837478 -28419105 - AluSq/x SINE Alu -182 131 1 669 253 66 0 chr2 224837658 224837824 -28418759 - MER5A DNA MER1_type -9 180 4 470 267 0 55 chr2 224838383 224838529 -28418054 + MIR SINE MIR 75 212 -50 265 255 82 20 chr2 224839341 224839439 -28417144 - MIR3 SINE MIR -24 184 81 23 33 0 0 chr2 224842662 224842692 -28413891 + AT_rich Low_complexity Low_complexity 1 30 0 2151 125 0 3 chr2 224842692 224842988 -28413595 - AluSx SINE Alu -17 295 1 21 0 0 0 chr2 224843866 224843887 -28412696 + AT_rich Low_complexity Low_complexity 1 21 0 558 278 25 35 chr2 224844063 224844261 -28412322 - MIR SINE MIR -2 260 65 476 211 8 24 chr2 224844748 224844871 -28411712 + L1PB4 LINE L1 6034 6154 -2 24 85 0 0 chr2 224845458 224845517 -28411066 + AT_rich Low_complexity Low_complexity 1 59 0 2425 85 3 0 chr2 224845888 224846195 -28410388 - AluSp SINE Alu -5 308 1 358 301 76 71 chr2 224847195 224847628 -28408955 + L1MC4a LINE L1 5488 5920 -201 4543 101 29 5 chr2 224847831 224848494 -28408089 + L1PA13 LINE L1 5482 6160 -3 275 281 0 0 chr2 224849817 224849881 -28406702 + L2 LINE L2 3208 3271 -1 506 281 22 0 chr2 224850152 224850291 -28406292 + MIR SINE MIR 3 144 -118 2426 207 51 22 chr2 224851187 224851833 -28404750 + L1MB7 LINE L1 5508 6172 -12 21 36 0 0 chr2 224852027 224852055 -28404528 + AT_rich Low_complexity Low_complexity 1 28 0 454 352 127 18 chr2 224852063 224852401 -28404182 - L2 LINE L2 -1 3271 2897 378 250 93 108 chr2 224852812 224852919 -28403664 - L2 LINE L2 -35 3278 3171 1987 156 0 0 chr2 224852919 224853214 -28403369 + AluSx SINE Alu 1 295 -17 378 250 93 108 chr2 224853214 224853374 -28403209 - L2 LINE L2 -142 3171 3015 719 282 37 51 chr2 224853444 224853738 -28402845 - L2 LINE L2 -448 2866 2577 305 254 0 14 chr2 224854313 224854384 -28402199 + MIR3 SINE MIR 121 190 -18 180 304 95 63 chr2 224854849 224854883 -28401700 - L2 LINE L2 -791 2523 2492 2350 67 0 3 chr2 224854883 224855181 -28401402 + AluSg SINE Alu 1 297 -13 180 304 95 63 chr2 224855181 224855304 -28401279 - L2 LINE L2 -822 2492 2361 2626 55 0 0 chr2 224855322 224855633 -28400950 + AluY SINE Alu 1 311 0 726 34 0 0 chr2 224856658 224856746 -28399837 - AluY SINE Alu -9 302 215 202 230 140 60 chr2 224858141 224858241 -28398342 + MIR SINE MIR 31 139 -69 23 33 0 0 chr2 224859116 224859146 -28397437 + AT_rich Low_complexity Low_complexity 1 30 0 685 85 0 28 chr2 224859205 224859311 -28397272 + L1MB2 LINE L1 5449 5551 -620 198 0 0 0 chr2 224859313 224859335 -28397248 + (CA)n Simple_repeat Simple_repeat 1 22 0 1965 127 26 45 chr2 224859338 224859715 -28396868 + L1MB2 LINE L1 5795 6164 -7 870 192 6 24 chr2 224859719 224859886 -28396697 - FRAM SINE Alu -2 164 1 1365 184 12 20 chr2 224859914 224860169 -28396414 - AluJb SINE Alu -59 253 1 21 0 0 0 chr2 224861035 224861056 -28395527 + AT_rich Low_complexity Low_complexity 1 21 0 237 265 0 0 chr2 224861563 224861612 -28394971 + L2 LINE L2 3254 3302 -11 345 247 43 21 chr2 224862133 224862226 -28394357 - L1MC4 LINE L1 -1339 6703 6609 230 264 16 11 chr2 224862446 224862525 -28394058 - MIR SINE MIR -83 125 45 2066 266 27 52 chr2 224862986 224863799 -28392784 + L1PA15-16 LINE L1 2153 2945 -3904 1445 109 5 0 chr2 224863956 224864148 -28392435 + AluSc SINE Alu 106 298 -11 463 144 21 31 chr2 224864148 224864245 -28392338 + MLT1F LTR MaLR 447 542 0 187 272 128 56 chr2 224864328 224864453 -28392130 + L2 LINE L2 2701 2834 -480 1151 175 4 44 chr2 224864454 224864682 -28391901 - AluJb SINE Alu -17 295 77 33 25 0 0 chr2 224865036 224865076 -28391507 + AT_rich Low_complexity Low_complexity 1 40 0 240 279 13 25 chr2 224865729 224865808 -28390775 - MER5A DNA MER1_type -1 188 111 222 128 0 0 chr2 224866466 224866505 -28390078 + (TG)n Simple_repeat Simple_repeat 1 39 0 332 239 61 49 chr2 224866513 224866676 -28389907 + L1ME4a LINE L1 5954 6118 -3 2290 117 0 0 chr2 224866754 224867053 -28389530 + AluSx SINE Alu 1 299 -13 600 226 24 0 chr2 224867286 224867454 -28389129 - MER96B DNA MER1_type? -202 215 44 2286 106 3 6 chr2 224867697 224868008 -28388575 - AluSq SINE Alu -3 310 1 225 212 43 43 chr2 224868019 224868088 -28388495 + MIR3 SINE MIR 103 172 -36 3517 226 12 9 chr2 224868197 224869190 -28387393 - L1 LINE L1 -2476 3670 2675 6269 70 10 40 chr2 224869230 224870826 -28385757 + SVA Other Other 6 1398 0 326 194 0 0 chr2 224870826 224870888 -28385695 - L1 LINE L1 -3457 2689 2628 * 5250 215 157 15 chr2 224870883 224872697 -28383886 - L1PBa LINE L1 -4787 2076 6 412 315 79 39 chr2 224872787 224873117 -28383466 - HAL1 LINE L1 -1575 932 590 2400 74 3 13 chr2 224873424 224873735 -28382848 - AluY SINE Alu -3 308 1 1526 116 10 0 chr2 224873738 224873945 -28382638 - AluSg/x SINE Alu -19 291 83 185 257 0 0 chr2 224874024 224874059 -28382524 + MIR SINE MIR 196 230 -32 223 293 144 40 chr2 224875082 224875256 -28381327 - L2 LINE L2 -5 3308 3117 430 330 66 35 chr2 224875334 224875622 -28380961 - L2 LINE L2 -375 2939 2643 265 336 0 61 chr2 224875897 224876028 -28380555 - MIR SINE MIR -76 186 64 437 204 184 4 chr2 224877175 224877332 -28379251 + L1MC4a LINE L1 7145 7504 -491 2177 95 27 7 chr2 224877442 224877737 -28378846 - AluSx SINE Alu -11 301 1 2361 93 0 0 chr2 224877920 224878221 -28378362 - AluSq SINE Alu -12 301 1 549 198 27 27 chr2 224878345 224878542 -28378041 + L1MD3 LINE L1 6944 7099 -686 5602 162 36 23 chr2 224878545 224879001 -28377582 + L1MC1 LINE L1 4861 5310 -1023 2402 61 0 48 chr2 224879001 224879314 -28377269 + AluY SINE Alu 1 298 -13 5602 162 36 23 chr2 224879314 224880277 -28376306 + L1MC1 LINE L1 5310 6308 -25 383 342 17 0 chr2 224882134 224882254 -28374329 - L2 LINE L2 -1 3271 3150 230 328 0 134 chr2 224883030 224883262 -28373321 + L2 LINE L2 2986 3186 -86 204 304 18 0 chr2 224883399 224883455 -28373128 - L2 LINE L2 -236 3036 2980 22 0 0 0 chr2 224883895 224883917 -28372666 + AT_rich Low_complexity Low_complexity 1 22 0 803 214 19 7 chr2 224884232 224884386 -28372197 - FRAM SINE Alu -10 156 1 294 123 0 0 chr2 224884527 224884584 -28371999 + (T)n Simple_repeat Simple_repeat 1 57 0 2471 65 0 7 chr2 224885989 224886298 -28370285 + AluY SINE Alu 1 307 -4 433 148 0 34 chr2 224886486 224886574 -28370009 - MER53 DNA DNA 0 189 105 238 286 24 36 chr2 224886622 224886706 -28369877 + MIR3 SINE MIR 109 191 -17 180 111 0 0 chr2 224887738 224887765 -28368818 + (CAAGT)n Simple_repeat Simple_repeat 3 29 0 2372 55 0 33 chr2 224889239 224889546 -28367037 + AluY SINE Alu 1 297 -14 426 179 0 0 chr2 224890260 224890338 -28366245 + MLT1A2 LTR MaLR 1 78 -296 337 167 0 0 chr2 224890339 224890399 -28366184 + MLT1A1 LTR MaLR 306 365 0 2480 87 0 0 chr2 224892585 224892896 -28363687 + AluY SINE Alu 1 311 0 517 292 51 22 chr2 224893559 224893737 -28362846 + MIR SINE MIR 32 214 -48 2374 77 10 3 chr2 224894313 224894611 -28361972 + AluSg1 SINE Alu 1 300 -9 24 77 0 0 chr2 224894772 224894824 -28361759 + AT_rich Low_complexity Low_complexity 1 52 0 322 299 120 38 chr2 224897199 224897383 -28359200 - MIR SINE MIR -59 203 5 1534 144 85 15 chr2 224898405 224898457 -28358126 - Charlie5 DNA MER1_type -26 2598 2551 2303 69 0 0 chr2 224898457 224898774 -28357809 + AluY SINE Alu 1 286 -25 1534 144 85 15 chr2 224898774 224899061 -28357522 - Charlie5 DNA MER1_type -73 2551 2234 530 184 35 0 chr2 224899063 224899177 -28357406 - Charlie5 DNA MER1_type -2489 123 6 727 222 62 68 chr2 224899244 224899508 -28357075 + L1MB1 LINE L1 5295 5556 -612 2376 95 0 9 chr2 224899510 224899825 -28356758 + AluSx SINE Alu 1 312 0 528 154 0 0 chr2 224899880 224899958 -28356625 - L1PA8 LINE L1 -31 6141 6064 854 151 52 5 chr2 224899997 224900189 -28356394 + L1MA8 LINE L1 6090 6290 -1 2472 74 0 0 chr2 224900255 224900552 -28356031 + AluSg SINE Alu 1 297 -13 2756 173 36 28 chr2 224900560 224901166 -28355417 + L1MB1 LINE L1 5557 6167 -1 1573 203 3 36 chr2 224901224 224901530 -28355053 - AluJo SINE Alu -16 296 1 2156 174 35 0 chr2 224901544 224901947 -28354636 - L1MA6 LINE L1 0 6300 5884 1894 144 3 12 chr2 224901947 224902279 -28354304 - L1M1 LINE L1 -694 5606 5276 24 0 0 0 chr2 224902380 224902404 -28354179 + AT_rich Low_complexity Low_complexity 1 24 0 216 0 0 0 chr2 224902556 224902580 -28354003 + (TTG)n Simple_repeat Simple_repeat 1 24 0 1830 251 65 43 chr2 224902581 224903373 -28353210 - L1ME2 LINE L1 0 6178 5425 551 328 18 6 chr2 224903606 224903777 -28352806 + MIR SINE MIR 20 192 -70 203 322 240 11 chr2 224903925 224904108 -28352475 + MIR SINE MIR 23 247 -15 26 64 0 0 chr2 224905242 224905289 -28351294 + AT_rich Low_complexity Low_complexity 1 47 0 202 28 28 28 chr2 224905452 224905488 -28351095 + (TATAA)n Simple_repeat Simple_repeat 5 40 0 3206 95 11 4 chr2 224905771 224906225 -28350358 + L1PA10 LINE L1 5707 6163 -5 3279 143 8 30 chr2 224906334 224907397 -28349186 + L1PA13 LINE L1 4708 5737 -424 1957 144 3 25 chr2 224907397 224907716 -28348867 + AluSx SINE Alu 1 312 0 1549 170 55 6 chr2 224907845 224908209 -28348374 + L1PA13 LINE L1 5771 6152 -11 351 0 0 0 chr2 224910654 224910693 -28345890 + (TG)n Simple_repeat Simple_repeat 1 39 0 200 273 0 0 chr2 224910701 224910745 -28345838 + GA-rich Low_complexity Low_complexity 5 48 0 401 228 54 0 chr2 224912803 224912895 -28343688 + L2 LINE L2 3214 3310 -3 411 279 186 7 chr2 224913139 224913279 -28343304 + MIR3 SINE MIR 16 180 -28 232 225 0 0 chr2 224914189 224914229 -28342354 - L2 LINE L2 -14 3258 3219 254 270 40 14 chr2 224916253 224916327 -28340256 + MIR SINE MIR 117 192 -70 1005 146 75 42 chr2 224917211 224917423 -28339160 + MER20 DNA MER1_type 1 219 0 327 354 61 7 chr2 224919245 224919392 -28337191 + L2 LINE L2 3115 3269 -3 923 310 76 42 chr2 224921486 224922071 -28334512 + L2 LINE L2 2716 3313 0 252 211 156 22 chr2 224923452 224923542 -28333041 + L1ME LINE L1 5560 5661 -460 387 41 0 0 chr2 224923728 224923777 -28332806 + (CA)n Simple_repeat Simple_repeat 2 50 0 261 0 0 0 chr2 224924337 224924366 -28332217 + (A)n Simple_repeat Simple_repeat 1 29 0 226 217 22 0 chr2 224924395 224924441 -28332142 + GA-rich Low_complexity Low_complexity 2 48 0 1235 223 7 40 chr2 224924582 224924882 -28331701 + MLT1D LTR MaLR 208 497 -8 713 165 17 0 chr2 224925413 224925528 -28331055 + MER5A DNA MER1_type 73 189 0 1067 214 5 0 chr2 224925558 224925745 -28330838 - MER58A DNA MER1_type -36 188 1 234 359 7 11 chr2 224925804 224925976 -28330607 + CT-rich Low_complexity Low_complexity 2 269 0 193 355 16 0 chr2 224927514 224927576 -28329007 - L2 LINE L2 -3 3269 3207 2258 38 28 14 chr2 224927627 224927915 -28328668 - L1PA3 LINE L1 -2 6153 5862 1576 164 3 57 chr2 224928136 224928497 -28328086 + AluJo SINE Alu 1 345 0 251 313 76 46 chr2 224928507 224928638 -28327945 - MIR SINE MIR -41 221 87 21 0 0 0 chr2 224928639 224928660 -28327923 + AT_rich Low_complexity Low_complexity 1 21 0 188 364 93 7 chr2 224928745 224928885 -28327698 + MIR3 SINE MIR 5 156 -52 2358 98 0 0 chr2 224930053 224930359 -28326224 + AluSg SINE Alu 2 307 -3 21 36 0 0 chr2 224930553 224930581 -28326002 + AT_rich Low_complexity Low_complexity 1 28 0 465 194 62 16 chr2 224931138 224931267 -28325316 - MER103 DNA DNA -8 158 24 27 0 0 0 chr2 224931872 224931899 -28324684 + AT_rich Low_complexity Low_complexity 1 27 0 2180 95 0 3 chr2 224931899 224932218 -28324365 + AluSc SINE Alu 1 318 0 197 365 125 0 chr2 224932697 224932793 -28323790 + MIR SINE MIR 30 137 -71 21 36 0 0 chr2 224933591 224933619 -28322964 + AT_rich Low_complexity Low_complexity 1 28 0 464 279 128 35 chr2 224933681 224934174 -28322409 + L1ME3A LINE L1 5408 5957 -213 265 162 141 91 chr2 224935857 224935956 -28320627 - L2 LINE L2 0 3272 3169 1927 147 0 17 chr2 224937453 224937753 -28318830 + AluSx SINE Alu 1 295 -17 23 0 0 0 chr2 224937829 224937852 -28318731 + AT_rich Low_complexity Low_complexity 1 23 0 2257 112 3 6 chr2 224938430 224938792 -28317791 + AluSx SINE Alu 1 361 0 2114 94 0 0 chr2 224939275 224939551 -28317032 - AluSg SINE Alu -8 302 27 1588 163 13 43 chr2 224941221 224941521 -28315062 - AluJo SINE Alu -21 291 1 2162 115 20 0 chr2 224942046 224942350 -28314233 + AluSx SINE Alu 1 310 -2 258 317 118 21 chr2 224942587 224942773 -28313810 + MIR SINE MIR 39 242 -20 198 0 0 0 chr2 224942926 224942948 -28313635 + (TTCA)n Simple_repeat Simple_repeat 2 23 0 342 0 0 0 chr2 224944154 224944192 -28312391 + (TTA)n Simple_repeat Simple_repeat 2 39 0 2039 118 4 0 chr2 224944196 224944476 -28312107 - AluSp SINE Alu -32 281 1 282 56 0 0 chr2 224944722 224944758 -28311825 + (TG)n Simple_repeat Simple_repeat 2 37 0 220 386 114 0 chr2 224944937 224945077 -28311506 - L2 LINE L2 -233 3039 2884 200 254 28 14 chr2 224946123 224946194 -28310389 + (TTCA)n Simple_repeat Simple_repeat 1 72 0 243 222 0 0 chr2 224946206 224946251 -28310332 - L2 LINE L2 -5 3308 3264 2110 97 78 8 chr2 224947165 224947533 -28309050 + LTR7 LTR ERV1 1 450 0 15433 140 11 20 chr2 224947533 224951225 -28305358 + HERVH LTR ERV1 1 3993 -3720 3347 140 0 6 chr2 224951257 224951828 -28304755 + HERVH LTR ERV1 3955 4529 -2860 2392 178 2 7 chr2 224951828 224952284 -28304299 + HERVH LTR ERV1 6489 6942 -771 207 0 0 0 chr2 224952301 224952324 -28304259 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 3278 117 11 9 chr2 224952349 224952889 -28303694 + HERVH LTR ERV1 7173 7713 0 2008 91 93 5 chr2 224952889 224953254 -28303329 + LTR7 LTR ERV1 1 450 0 321 232 0 14 chr2 224953272 224953341 -28303242 + MIR SINE MIR 39 106 -156 367 256 218 0 chr2 224953451 224953607 -28302976 - MIR SINE MIR -70 192 3 198 271 74 49 chr2 224953607 224953708 -28302875 + MIR SINE MIR 104 207 -55 271 218 55 0 chr2 224955786 224955841 -28300742 - L2 LINE L2 0 3313 3256 266 286 51 0 chr2 224956037 224956135 -28300448 - L2 LINE L2 -10 3262 3160 1441 254 100 11 chr2 224956193 224956634 -28299949 + MLT1F1 LTR MaLR 1 480 -87 226 62 0 0 chr2 224956640 224956672 -28299911 + Alu SINE Alu 5 36 -266 187 156 0 0 chr2 224956802 224956834 -28299749 + MIR SINE MIR 111 142 -66 889 186 6 0 chr2 224957051 224957207 -28299376 + AluSq SINE Alu 133 289 -24 390 42 0 0 chr2 224958793 224958841 -28297742 + (CA)n Simple_repeat Simple_repeat 2 49 0 425 326 51 15 chr2 224958848 224959044 -28297539 - L2 LINE L2 -680 2634 2432 750 256 26 20 chr2 224959713 224959908 -28296675 + MIR SINE MIR 57 252 -10 650 246 28 0 chr2 224961663 224961805 -28294778 + MIR SINE MIR 21 166 -96 2233 80 10 3 chr2 224962002 224962291 -28294292 + AluSg1 SINE Alu 1 291 -18 2323 81 0 16 chr2 224963443 224963752 -28292831 + AluY SINE Alu 1 304 -7 2336 106 0 6 chr2 224965701 224966012 -28290571 - AluSg1 SINE Alu 0 309 1 623 211 139 36 chr2 224966616 224966782 -28289801 - MER5A DNA MER1_type 0 189 7 1809 181 22 37 chr2 224966877 224967196 -28289387 + Charlie4a DNA MER1_type 24 335 -1626 2346 93 0 0 chr2 224967196 224967487 -28289096 - AluSc SINE Alu -18 291 1 1809 181 22 37 chr2 224967487 224967625 -28288958 + Charlie4a DNA MER1_type 335 474 -34 223 329 12 24 chr2 224967670 224967752 -28288831 - MIR SINE MIR -84 124 44 22 0 0 0 chr2 224968528 224968550 -28288033 + AT_rich Low_complexity Low_complexity 1 22 0 306 271 10 23 chr2 224969224 224969353 -28287230 + L1MC4 LINE L1 6477 6603 -1205 416 266 160 27 chr2 224969397 224969585 -28286998 - L1MC4 LINE L1 -1135 6907 6695 186 103 0 0 chr2 224969652 224969681 -28286902 + (TAGA)n Simple_repeat Simple_repeat 4 32 0 250 281 168 0 chr2 224969711 224969878 -28286705 + L1MC4 LINE L1 6913 7107 -935 819 234 140 21 chr2 224969921 224970250 -28286333 + L1MC4 LINE L1 7390 7757 -285 235 164 109 0 chr2 224970328 224970383 -28286200 + L1MC4 LINE L1 7982 8042 0 2183 118 0 13 chr2 224971338 224971644 -28284939 + AluSx SINE Alu 5 306 -6 231 167 222 0 chr2 224971852 224971906 -28284677 - L2 LINE L2 -12 3301 3236 2447 178 20 18 chr2 224971953 224972198 -28284385 - L1P LINE L1 -738 5428 5185 2113 115 17 0 chr2 224972198 224972485 -28284098 - AluSx SINE Alu -20 292 1 2447 178 20 18 chr2 224972485 224972914 -28283669 - L1P LINE L1 -981 5185 4760 3484 138 65 54 chr2 224972915 224973620 -28282963 + L1PA16 LINE L1 5449 6161 -5 630 284 258 9 chr2 224973884 224974229 -28282354 - L3 LINE CR1 -85 1492 1062 412 299 170 22 chr2 224974229 224974453 -28282130 - MIR SINE MIR -1 261 5 190 290 0 16 chr2 224974473 224974535 -28282048 - L3 LINE CR1 -542 1035 975 2743 94 6 3 chr2 224974841 224975204 -28281379 + THE1B LTR MaLR 1 364 0 2895 177 61 17 chr2 224976023 224976376 -28280207 - L1PB4 LINE L1 -16 6140 5745 2165 120 13 0 chr2 224976376 224976684 -28279899 - AluSq SINE Alu 0 313 2 2895 177 61 17 chr2 224976684 224976967 -28279616 - L1PB4 LINE L1 -411 5745 5476 13926 198 15 8 chr2 224976994 224982561 -28274022 - L1PB2 LINE L1 0 6867 105 12579 214 21 22 chr2 224982613 224986663 -28269920 - L1P5 LINE L1 -672 6187 2164 353 242 0 22 chr2 224987092 224987183 -28269400 + L1MC4 LINE L1 6615 6703 -1339 331 311 0 0 chr2 224987123 224987213 -28269370 - L1MC4 LINE L1 -1339 6703 6614 * 321 276 23 0 chr2 224987206 224987293 -28269290 + L1MC4 LINE L1 6615 6703 -1339 * 237 143 16 32 chr2 224987295 224987358 -28269225 + L1MCa LINE L1 2007 2068 -4358 279 190 0 0 chr2 224987358 224987416 -28269167 + (TA)n Simple_repeat Simple_repeat 1 58 0 195 69 0 0 chr2 224987452 224987481 -28269102 + (GA)n Simple_repeat Simple_repeat 2 30 0 1620 181 25 4 chr2 224987505 224987781 -28268802 - AluJb SINE Alu -30 282 1 2032 123 31 7 chr2 224987805 224988098 -28268485 - AluSq SINE Alu -13 300 1 183 308 46 0 chr2 224989854 224989919 -28266664 - L2 LINE L2 -1874 1440 1373 2148 95 3 17 chr2 224992402 224992696 -28263887 + AluSq SINE Alu 2 291 -22 329 288 98 76 chr2 224992771 224992955 -28263628 - MIR SINE MIR -69 193 6 315 287 110 15 chr2 224994030 224994166 -28262417 - MIR SINE MIR -92 170 22 2008 118 0 0 chr2 224995374 224995644 -28260939 - AluSg SINE Alu -1 309 40 2263 121 0 3 chr2 224995786 224996099 -28260484 - AluSx SINE Alu 0 312 1 250 24 0 49 chr2 224997531 224997572 -28259011 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 2227 101 0 0 chr2 224997608 224997895 -28258688 - AluSq SINE Alu -10 303 17 2362 64 0 0 chr2 224998948 224999258 -28257325 - AluY SINE Alu 0 310 1 1359 193 58 51 chr2 224999686 225000080 -28256503 + MLT2C1 LTR ERVL 1 397 0 1018 96 45 0 chr2 225000670 225000826 -28255757 - L1MA3 LINE L1 0 6305 6143 2457 67 0 0 chr2 225001024 225001321 -28255262 + AluY SINE Alu 1 297 -14 5098 144 41 5 chr2 225002343 225003204 -28253379 - MER49 LTR ERV1 0 923 9 1493 259 87 5 chr2 225003355 225003734 -28252849 + MLT1F LTR MaLR 2 411 -131 6176 89 1 8 chr2 225003775 225004677 -28251906 - L1P LINE L1 -962 5184 4289 2605 218 68 45 chr2 225005228 225006034 -28250549 - L1MC4a LINE L1 -2 7806 6982 226 248 38 38 chr2 225006098 225006203 -28250380 - L1MC1 LINE L1 -9 6324 6220 255 250 60 12 chr2 225056695 225056779 -28199804 + MIR SINE MIR 60 147 -115 642 322 33 20 chr2 225056811 225057056 -28199527 + MIR SINE MIR 15 262 0 892 179 35 57 chr2 225057273 225057502 -28199081 - L1MB7 LINE L1 -16 6168 5945 316 331 95 16 chr2 225058212 225058517 -28198066 + L1MDa LINE L1 1239 1567 -4973 305 268 131 50 chr2 225058524 225058651 -28197932 + HAL1 LINE L1 1309 1424 -1083 1960 119 0 27 chr2 225058651 225058945 -28197638 + AluSx SINE Alu 6 291 -21 305 268 131 50 chr2 225058945 225059114 -28197469 + HAL1 LINE L1 1424 1640 -867 2150 122 0 0 chr2 225059114 225059426 -28197157 + AluSq SINE Alu 1 312 0 305 268 131 50 chr2 225059426 225059470 -28197113 + HAL1 LINE L1 1640 1679 -828 198 0 0 0 chr2 225062189 225062211 -28194372 + (T)n Simple_repeat Simple_repeat 1 22 0 188 222 0 0 chr2 225063395 225063431 -28193152 + L2 LINE L2 3225 3260 -12 2082 116 3 17 chr2 225063462 225063764 -28192819 - AluSx SINE Alu -14 298 1 669 151 206 7 chr2 225063774 225063920 -28192663 - MLT1D LTR MaLR -10 495 321 654 230 0 0 chr2 225064035 225064161 -28192422 - Charlie1 DNA MER1_type 0 2761 2636 967 209 95 5 chr2 225064169 225064379 -28192204 - Charlie1 DNA MER1_type -2532 229 1 680 228 120 8 chr2 225065066 225065307 -28191276 + MER5C DNA MER1_type 1 268 -56 1840 140 14 7 chr2 225065521 225065799 -28190784 + AluSx SINE Alu 1 280 -32 348 127 0 0 chr2 225065817 225065872 -28190711 + (CA)n Simple_repeat Simple_repeat 2 56 0 1004 201 0 0 chr2 225065875 225066039 -28190544 + FRAM SINE Alu 1 161 -15 367 254 121 36 chr2 225066963 225067119 -28189464 - L1ME4a LINE L1 0 6121 5939 2527 78 0 0 chr2 225067119 225067426 -28189157 - AluY SINE Alu -4 307 1 367 254 121 36 chr2 225067426 225067493 -28189090 - L1ME4a LINE L1 -182 5939 5879 250 244 87 55 chr2 225068362 225068489 -28188094 - L1MC5 LINE L1 -46 7915 7785 599 231 26 39 chr2 225068697 225068841 -28187742 - MIR SINE MIR -52 210 67 2181 86 35 7 chr2 225068841 225069131 -28187452 - AluSq SINE Alu -12 301 4 599 231 26 39 chr2 225069131 225069142 -28187441 - MIR SINE MIR -195 67 57 2856 176 63 44 chr2 225069143 225069713 -28186870 - MER39 LTR ERV1 0 707 150 1626 178 21 4 chr2 225069713 225069994 -28186589 - AluJb SINE Alu -24 288 3 2856 176 63 44 chr2 225069994 225070010 -28186573 - MER39 LTR ERV1 -557 150 136 2219 106 0 13 chr2 225070010 225070311 -28186272 + AluSx SINE Alu 1 297 -15 2856 176 63 44 chr2 225070311 225070338 -28186245 - MER39 LTR ERV1 -571 136 81 661 186 124 23 chr2 225070793 225070922 -28185661 + FAM SINE Alu 23 164 -21 2238 109 3 3 chr2 225071094 225071405 -28185178 - AluSq SINE Alu -2 311 1 2105 103 0 10 chr2 225071840 225072131 -28184452 - AluSx SINE Alu -24 288 1 1915 141 10 14 chr2 225073227 225073517 -28183066 - AluJb SINE Alu -18 294 6 363 302 29 0 chr2 225073524 225073663 -28182920 - L1ME4a LINE L1 -237 5884 5742 2031 151 7 0 chr2 225073739 225074038 -28182545 + AluSx SINE Alu 5 305 -7 225 0 0 0 chr2 225074038 225074063 -28182520 + (TA)n Simple_repeat Simple_repeat 1 25 0 2014 125 3 47 chr2 225074087 225074407 -28182176 + AluSx SINE Alu 1 306 -6 677 238 47 15 chr2 225074407 225074606 -28181977 + MIR SINE MIR 53 259 -3 613 88 0 0 chr2 225074785 225074865 -28181718 - MADE1 DNA Mariner 0 80 1 2339 62 0 3 chr2 225074991 225075280 -28181303 + AluY SINE Alu 11 298 -13 579 181 0 0 chr2 225075319 225075435 -28181148 + GA-rich Low_complexity Low_complexity 4 119 0 250 130 56 19 chr2 225075535 225075589 -28180994 - AluJ/FLAM SINE Alu -241 61 6 1571 186 14 10 chr2 225075671 225075962 -28180621 + AluJb SINE Alu 2 293 -19 1464 133 53 9 chr2 225076359 225076584 -28179999 - MER46A DNA MER2_type -1 235 1 572 97 118 11 chr2 225076639 225076732 -28179851 - L1MB8 LINE L1 -5 6173 6071 1151 191 51 21 chr2 225076732 225076968 -28179615 - MSTB LTR MaLR 0 426 184 811 142 8 0 chr2 225076999 225077119 -28179464 - AluSg/x SINE Alu -21 291 171 2434 51 0 3 chr2 225077646 225077938 -28178645 - AluY SINE Alu -20 291 1 1713 186 225 136 chr2 225077938 225078467 -28178116 - L1M4 LINE L1 -1434 5523 5043 1779 146 42 0 chr2 225078467 225078755 -28177828 - AluSp SINE Alu -13 300 1 1087 96 0 0 chr2 225078755 225078890 -28177693 - AluSq/x SINE Alu -178 135 1 1713 186 225 136 chr2 225078890 225079359 -28177224 - L1M4 LINE L1 -1913 5044 5 180 0 0 0 chr2 225080239 225080259 -28176324 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2078 128 3 10 chr2 225080261 225080558 -28176025 - AluSx SINE Alu -17 295 1 308 237 62 10 chr2 225080897 225080994 -28175589 + MER113 DNA MER1_type? 236 337 -184 2353 89 0 25 chr2 225081015 225081330 -28175253 + AluSx SINE Alu 1 307 -5 355 242 201 9 chr2 225081807 225082026 -28174557 - L2 LINE L2 -977 2337 2077 1974 92 84 21 chr2 225082582 225082866 -28173717 - AluSx SINE Alu -10 302 1 227 366 30 0 chr2 225082955 225083056 -28173527 + L2 LINE L2 2653 2756 -558 507 285 103 80 chr2 225083565 225083843 -28172740 + L2 LINE L2 2873 3164 -108 1980 131 7 3 chr2 225083843 225084141 -28172442 - AluSq SINE Alu -14 299 1 507 285 103 80 chr2 225084141 225084251 -28172332 + L2 LINE L2 3164 3270 -2 2145 118 3 3 chr2 225084895 225085183 -28171400 - AluSx SINE Alu -20 292 5 2895 170 90 32 chr2 225085466 225085834 -28170749 - L1MC2 LINE L1 0 6344 5999 768 203 8 8 chr2 225085834 225085967 -28170616 - FLAM_A SINE Alu 0 133 1 2895 170 90 32 chr2 225085967 225086263 -28170320 - L1MC2 LINE L1 -345 5999 5641 476 156 62 138 chr2 225086281 225086441 -28170142 + L2 LINE L2 3152 3299 -14 2316 89 6 13 chr2 225086491 225086806 -28169777 - AluSq SINE Alu 0 313 1 872 267 85 23 chr2 225086850 225087240 -28169343 - HAL1b LINE L1 -308 1040 627 396 0 0 0 chr2 225087256 225087300 -28169283 + (TG)n Simple_repeat Simple_repeat 2 45 0 2343 78 0 0 chr2 225088885 225089178 -28167405 + AluY SINE Alu 1 293 -18 2242 92 0 7 chr2 225089311 225089604 -28166979 - AluSx SINE Alu -5 307 17 26 30 0 0 chr2 225090208 225090241 -28166342 + AT_rich Low_complexity Low_complexity 1 33 0 21 36 0 0 chr2 225090351 225090379 -28166204 + AT_rich Low_complexity Low_complexity 1 28 0 28 29 0 0 chr2 225091121 225091156 -28165427 + AT_rich Low_complexity Low_complexity 1 35 0 850 210 19 19 chr2 225091616 225091778 -28164805 + FAM SINE Alu 1 162 -13 236 167 0 0 chr2 225092009 225092051 -28164532 - L1MC/D LINE L1 -2077 5731 5690 640 249 113 64 chr2 225092054 225092427 -28164156 - L1MC/D LINE L1 -2164 5644 5254 2048 109 0 0 chr2 225092688 225092955 -28163628 - AluSx SINE Alu -45 267 1 290 256 158 30 chr2 225093017 225093150 -28163433 - HsTC2 DNA Tc2 -1015 883 734 1589 196 14 0 chr2 225094527 225094813 -28161770 + AluJb SINE Alu 2 291 -21 246 244 28 85 chr2 225094928 225095104 -28161479 - AluY SINE Alu -7 294 129 24 0 0 0 chr2 225095383 225095407 -28161176 + AT_rich Low_complexity Low_complexity 1 24 0 323 254 135 33 chr2 225095550 225095794 -28160789 - LTR37B LTR ERV1 -2 466 198 21 36 0 0 chr2 225095975 225096003 -28160580 + AT_rich Low_complexity Low_complexity 1 28 0 2145 111 10 3 chr2 225096042 225096339 -28160244 - AluSx SINE Alu -13 299 1 180 111 0 0 chr2 225097574 225097601 -28158982 + (T)n Simple_repeat Simple_repeat 1 27 0 1545 207 122 24 chr2 225097696 225097890 -28158693 + MLT1C LTR MaLR 1 174 -293 369 0 0 0 chr2 225097890 225097931 -28158652 + (CA)n Simple_repeat Simple_repeat 2 42 0 1545 207 122 24 chr2 225097931 225098161 -28158422 + MLT1C LTR MaLR 174 467 0 219 268 54 0 chr2 225098225 225098281 -28158302 + MIR SINE MIR 9 67 -195 2066 133 7 3 chr2 225098299 225098601 -28157982 + AluSx SINE Alu 1 303 -9 208 121 0 0 chr2 225098629 225098662 -28157921 + MIR SINE MIR 76 108 -154 963 184 0 0 chr2 225098736 225098894 -28157689 - FRAM SINE Alu -7 169 12 308 278 11 0 chr2 225098906 225098996 -28157587 - MIR SINE MIR -111 151 61 589 163 0 0 chr2 225099011 225099097 -28157486 - FRAM/FAM SINE Alu -93 83 1 381 255 0 3 chr2 225099104 225099212 -28157371 - L1MC4 LINE L1 0 8039 7890 1568 139 4 36 chr2 225099227 225099478 -28157105 - AluSx SINE Alu -69 243 1 821 191 0 0 chr2 225099486 225099617 -28156966 - FLAM_A SINE Alu -2 131 1 297 0 0 0 chr2 225099678 225099711 -28156872 + (CA)n Simple_repeat Simple_repeat 2 34 0 429 246 49 49 chr2 225099760 225099902 -28156681 - L1MC4 LINE L1 -133 7909 7768 2521 248 49 59 chr2 225099952 225100232 -28156351 - L1ME3A LINE L1 -5 6165 5884 2098 93 47 0 chr2 225100232 225100510 -28156073 - AluSp SINE Alu -22 291 1 2521 248 49 59 chr2 225100510 225100963 -28155620 - L1ME3A LINE L1 -286 5884 5438 2146 121 20 3 chr2 225100963 225101269 -28155314 - AluSx SINE Alu -1 311 1 2521 248 49 59 chr2 225101269 225101369 -28155214 - L1ME3A LINE L1 -732 5438 5339 2438 174 41 33 chr2 225101512 225101995 -28154588 - MLT1F LTR MaLR 0 542 56 2061 124 7 14 chr2 225102096 225102386 -28154197 - AluSx SINE Alu -24 288 1 252 264 0 0 chr2 225102475 225102547 -28154036 - L1ME LINE L1 -465 5705 5634 1575 203 40 65 chr2 225102848 225103248 -28153335 - MLT1B LTR MaLR 0 390 1 200 94 31 0 chr2 225103268 225103300 -28153283 + CT-rich Low_complexity Low_complexity 3 35 0 406 118 13 13 chr2 225103518 225103594 -28152989 + (TTCC)n Simple_repeat Simple_repeat 1 76 0 1467 156 20 36 chr2 225104265 225104566 -28152017 - AluY SINE Alu -15 296 1 496 133 72 0 chr2 225104631 225104714 -28151869 - FRAM SINE Alu -17 159 71 276 355 33 20 chr2 225104841 225104993 -28151590 - MIR SINE MIR -52 210 57 237 231 0 0 chr2 225105123 225105175 -28151408 - L1MCc LINE L1 -5091 1332 1281 1840 151 91 23 chr2 225106450 225106801 -28149782 - THE1C LTR MaLR 0 375 1 1211 183 72 21 chr2 225106976 225107266 -28149317 - L1MD1 LINE L1 0 6242 5938 1911 160 41 68 chr2 225107273 225107313 -28149270 - L1MD1 LINE L1 -545 5697 5657 1850 118 65 11 chr2 225107313 225107592 -28148991 - AluSx SINE Alu -18 294 1 1911 160 41 68 chr2 225107592 225107968 -28148615 - L1MD1 LINE L1 -585 5657 5299 2090 134 3 0 chr2 225107968 225108266 -28148317 - AluSx SINE Alu -13 299 1 1911 160 41 68 chr2 225108266 225108450 -28148133 - L1MD1 LINE L1 -943 5299 5112 1600 137 58 61 chr2 225109036 225109349 -28147234 + AluSx SINE Alu 1 312 0 554 198 57 1 chr2 225109965 225110100 -28146483 - L1ME1 LINE L1 0 6184 6036 243 326 53 0 chr2 225110100 225110195 -28146388 + MIR3 SINE MIR 83 182 -26 1608 182 21 18 chr2 225110781 225111090 -28145493 - AluJo SINE Alu 0 311 2 1471 204 27 60 chr2 225112476 225112844 -28143739 - MLT1A1 LTR MaLR -9 356 1 2225 118 10 0 chr2 225113310 225113616 -28142967 + AluSc SINE Alu 1 309 0 531 176 69 0 chr2 225114588 225114690 -28141893 - L1MC3 LINE L1 -619 7166 7058 2131 98 9 35 chr2 225114745 225115062 -28141521 - AluSg SINE Alu -1 309 1 243 300 139 43 chr2 225115225 225115505 -28141078 - L3 LINE CR1 -402 1175 869 1446 216 176 7 chr2 225115591 225116017 -28140566 + MLT1F LTR MaLR 45 542 0 826 155 90 39 chr2 225116109 225116264 -28140319 + AluJo SINE Alu 2 164 -148 317 212 129 12 chr2 225116283 225116368 -28140215 + L1MC3 LINE L1 7039 7133 -652 228 255 0 0 chr2 225116371 225116422 -28140161 + MLT1F1 LTR MaLR 75 125 -442 2457 157 141 2 chr2 225116422 225116919 -28139664 + L1MC3 LINE L1 7190 7755 -30 2374 98 0 0 chr2 225116928 225117225 -28139358 + AluSx SINE Alu 1 297 -15 1245 97 10 46 chr2 225117340 225117536 -28139047 + MER39B LTR ERV1 465 653 0 985 67 0 7 chr2 225117669 225117804 -28138779 - AluY SINE Alu -3 308 175 669 97 55 14 chr2 225117815 225117960 -28138623 + CT-rich Low_complexity Low_complexity 3 153 0 681 276 24 0 chr2 225117962 225118132 -28138451 - FRAM SINE Alu -2 174 1 269 172 0 31 chr2 225118162 225118226 -28138357 - L1MA9 LINE L1 0 6312 6251 190 279 44 127 chr2 225119547 225119705 -28136878 + MIR SINE MIR 20 164 -98 1191 78 0 0 chr2 225120268 225120422 -28136161 - AluY SINE Alu -10 301 148 293 299 71 0 chr2 225120431 225120558 -28136025 - L2 LINE L2 -814 2500 2365 410 0 20 0 chr2 225120600 225120650 -28135933 + (CA)n Simple_repeat Simple_repeat 2 52 0 480 146 114 28 chr2 225120891 225121089 -28135494 - HsTC2 DNA Tc2 -8 1890 1641 5486 28 5 0 chr2 225121225 225121826 -28134757 + L1PA5 LINE L1 5551 6154 0 251 250 0 0 chr2 225122007 225122063 -28134520 - HsTC2 DNA Tc2 -247 1651 1596 1486 237 75 12 chr2 225122067 225122570 -28134013 - MLT1F1 LTR MaLR -13 554 1 234 314 0 0 chr2 225122571 225122641 -28133942 - HsTC2 DNA Tc2 -293 1605 1536 1956 136 0 17 chr2 225122646 225122941 -28133642 + AluSg SINE Alu 5 294 -16 380 200 75 0 chr2 225123025 225123105 -28133478 - HsTC2 DNA Tc2 -574 1324 1239 231 296 37 12 chr2 225123125 225123206 -28133377 + L2 LINE L2 3230 3312 -1 21 57 0 0 chr2 225123825 225123860 -28132723 + AT_rich Low_complexity Low_complexity 1 35 0 180 0 0 0 chr2 225124019 225124039 -28132544 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1923 150 0 0 chr2 225124041 225124321 -28132262 - AluSx SINE Alu -32 280 1 284 296 156 0 chr2 225124396 225124531 -28132052 + MIR SINE MIR 57 212 -50 2543 51 0 3 chr2 225124774 225125086 -28131497 + AluY SINE Alu 1 311 0 1292 81 6 6 chr2 225125088 225125262 -28131321 + AluY SINE Alu 127 300 -11 322 113 0 0 chr2 225125661 225125714 -28130869 - Alu SINE Alu -1 301 249 1467 170 60 4 chr2 225125714 225125979 -28130604 - AluJo SINE Alu -32 280 1 2264 92 33 0 chr2 225126131 225126434 -28130149 + AluSp SINE Alu 1 313 0 29 47 0 0 chr2 225126496 225126539 -28130044 + AT_rich Low_complexity Low_complexity 1 43 0 263 247 12 12 chr2 225127102 225127183 -28129400 + MIR SINE MIR 182 262 0 1911 188 10 33 chr2 225127605 225127999 -28128584 - MLT1B LTR MaLR -5 385 1 2424 88 7 0 chr2 225128067 225128374 -28128209 - AluSx SINE Alu -3 309 1 21 0 0 0 chr2 225128746 225128767 -28127816 + AT_rich Low_complexity Low_complexity 1 21 0 1491 149 24 60 chr2 225128849 225128896 -28127687 - MER33 DNA MER1_type -2261 324 277 2262 103 3 0 chr2 225128896 225129196 -28127387 - AluSx SINE Alu -11 301 1 1491 149 24 60 chr2 225129196 225129484 -28127099 - MER33 DNA MER1_type -2308 277 1 311 302 21 10 chr2 225129663 225129759 -28126824 - MLT1L LTR MaLR -81 534 438 351 184 74 22 chr2 225129890 225130033 -28126550 + L1M4c LINE L1 2231 2429 -3995 1489 176 126 4 chr2 225130034 225130289 -28126294 + AluJo SINE Alu 1 286 -16 271 167 0 0 chr2 225130311 225130359 -28126224 + L1M4c LINE L1 2380 2427 -3955 22 0 0 0 chr2 225130398 225130420 -28126163 + AT_rich Low_complexity Low_complexity 1 22 0 226 374 37 9 chr2 225130572 225130786 -28125797 - L2 LINE L2 -2575 739 520 439 198 0 0 chr2 225130902 225130983 -28125600 + U13 snRNA snRNA 1 81 -23 1937 152 3 0 chr2 225130983 225131280 -28125303 + AluSx SINE Alu 11 308 -4 2489 82 0 0 chr2 225131345 225131650 -28124933 + AluY SINE Alu 1 305 -6 1959 157 3 0 chr2 225131966 225132260 -28124323 + AluSx SINE Alu 1 295 -17 942 227 56 102 chr2 225132280 225132428 -28124155 + L2 LINE L2 1565 1718 -1596 1514 164 102 4 chr2 225132428 225132702 -28123881 + AluJb SINE Alu 1 301 -11 942 227 56 102 chr2 225132702 225132772 -28123811 + L2 LINE L2 1718 1790 -1524 1216 136 17 89 chr2 225132772 225133007 -28123576 + MER20 DNA MER1_type 2 219 0 942 227 56 102 chr2 225133007 225133078 -28123505 + L2 LINE L2 1790 1863 -1451 1938 128 46 0 chr2 225133078 225133360 -28123223 - AluSx SINE Alu -17 295 1 942 227 56 102 chr2 225133360 225133500 -28123083 + L2 LINE L2 1863 1976 -1338 1557 285 89 28 chr2 225133519 225134251 -28122332 + L2 LINE L2 2344 3120 -193 2105 104 36 0 chr2 225134286 225134565 -28122018 + AluSx SINE Alu 8 296 -16 2428 71 0 26 chr2 225135424 225135732 -28120851 + AluY SINE Alu 1 300 -11 294 266 0 13 chr2 225136208 225136287 -28120296 - MIR SINE MIR -111 151 74 1979 129 7 10 chr2 225136377 225136672 -28119911 - AluSx SINE Alu -14 298 5 981 114 8 0 chr2 225136679 225136811 -28119772 - AluSq/x SINE Alu -180 133 1 713 201 128 13 chr2 225136816 225136965 -28119618 - FRAM SINE Alu -9 167 2 446 238 0 0 chr2 225136969 225137053 -28119530 - FRAM/FAM SINE Alu -92 84 1 25 0 0 28 chr2 225137131 225137155 -28119428 + AT_rich Low_complexity Low_complexity 1 25 -10 2376 79 10 0 chr2 225137155 225137459 -28119124 - AluY SINE Alu -4 307 1 25 0 0 28 chr2 225137459 225137470 -28119113 + AT_rich Low_complexity Low_complexity 25 35 0 2344 59 3 7 chr2 225137470 225137758 -28118825 - AluY SINE Alu -24 287 1 2247 75 0 63 chr2 225138187 225138506 -28118077 + AluSx SINE Alu 1 299 -13 36 23 0 0 chr2 225138920 225138963 -28117620 + AT_rich Low_complexity Low_complexity 1 43 0 1365 175 28 35 chr2 225139089 225139419 -28117164 + AluSx SINE Alu 1 328 0 2288 82 0 38 chr2 225139422 225139740 -28116843 + AluSq SINE Alu 5 310 -3 1617 147 30 0 chr2 225140470 225140736 -28115847 - L1M4 LINE L1 -410 5774 5501 1782 174 0 13 chr2 225142532 225142836 -28113747 - AluJo SINE Alu -12 300 1 2013 146 3 0 chr2 225143589 225143890 -28112693 - AluSx SINE Alu -10 302 1 23 0 0 0 chr2 225145514 225145537 -28111046 + AT_rich Low_complexity Low_complexity 1 23 0 467 321 10 72 chr2 225146067 225146276 -28110307 - MIR3 SINE MIR -11 197 2 599 280 146 24 chr2 225146340 225146676 -28109907 + MLT1K LTR MaLR 212 588 0 21 36 0 0 chr2 225146685 225146713 -28109870 + AT_rich Low_complexity Low_complexity 1 28 0 237 33 0 0 chr2 225147030 225147060 -28109523 + (GA)n Simple_repeat Simple_repeat 1 30 0 22 0 0 0 chr2 225149430 225149452 -28107131 + AT_rich Low_complexity Low_complexity 1 22 0 1907 126 16 54 chr2 225149453 225149770 -28106813 - AluSx SINE Alu -7 305 1 23 0 0 0 chr2 225149791 225149814 -28106769 + AT_rich Low_complexity Low_complexity 1 23 0 414 294 21 32 chr2 225152022 225152209 -28104374 + MIR SINE MIR 65 249 -13 22 0 0 0 chr2 225152865 225152887 -28103696 + AT_rich Low_complexity Low_complexity 1 22 0 201 262 0 0 chr2 225153661 225153703 -28102880 + MIR3 SINE MIR 144 185 -23 186 71 0 0 chr2 225154193 225154221 -28102362 + (A)n Simple_repeat Simple_repeat 1 28 0 2216 100 0 13 chr2 225154636 225154935 -28101648 + AluSg SINE Alu 1 295 -15 1004 129 0 0 chr2 225155326 225155465 -28101118 - FLAM_C SINE Alu -4 139 1 2528 58 3 13 chr2 225157321 225157634 -28098949 - AluY SINE Alu -1 310 1 1315 141 123 21 chr2 225158002 225158286 -28098297 + THE1C LTR MaLR 1 313 -62 28 48 0 0 chr2 225160611 225160653 -28095930 + AT_rich Low_complexity Low_complexity 1 42 0 387 113 0 0 chr2 225160693 225160764 -28095819 + (TG)n Simple_repeat Simple_repeat 2 72 0 200 331 94 19 chr2 225160801 225160937 -28095646 - MIR SINE MIR -61 147 16 2072 153 65 32 chr2 225160938 225161350 -28095233 + MSTA LTR MaLR 1 426 -2 25 31 0 0 chr2 225161597 225161629 -28094954 + AT_rich Low_complexity Low_complexity 1 32 0 713 183 8 0 chr2 225161629 225161755 -28094828 - FLAM_C SINE Alu -2 131 5 1660 171 3 11 chr2 225163361 225163647 -28092936 - AluJo SINE Alu -28 284 1 2238 101 0 0 chr2 225165124 225165410 -28091173 - AluSg SINE Alu -11 299 14 2149 108 0 16 chr2 225166653 225166959 -28089624 - AluSx SINE Alu -11 301 1 228 276 86 43 chr2 225167393 225167509 -28089074 - L2 LINE L2 0 3313 3193 283 138 62 25 chr2 225168166 225168246 -28088337 - L1ME4a LINE L1 -22 6099 6017 198 0 0 0 chr2 225168900 225168922 -28087661 + (A)n Simple_repeat Simple_repeat 1 22 0 2434 95 0 0 chr2 225168931 225169237 -28087346 + AluSx SINE Alu 1 306 -6 247 236 22 34 chr2 225169290 225169379 -28087204 - L1MC4 LINE L1 -153 7889 7802 2501 77 0 0 chr2 225169430 225169727 -28086856 - AluSc SINE Alu -12 297 1 2258 113 3 0 chr2 225169728 225170028 -28086555 - AluSx SINE Alu -11 301 1 234 0 0 0 chr2 225170220 225170246 -28086337 + (T)n Simple_repeat Simple_repeat 1 26 0 183 156 0 0 chr2 225172316 225172348 -28084235 - MIR SINE MIR -72 190 159 329 250 98 0 chr2 225172372 225172484 -28084099 - L1MA10 LINE L1 -29 6305 6183 217 171 11 145 chr2 225172538 225172619 -28083964 - MIR SINE MIR -78 130 56 25 0 0 0 chr2 225172698 225172723 -28083860 + AT_rich Low_complexity Low_complexity 1 25 0 2130 129 7 3 chr2 225172746 225173055 -28083528 - AluSg SINE Alu 0 310 1 450 482 16 57 chr2 225173075 225173320 -28083263 - Tigger3(Golem) DNA MER2_type 0 3029 2795 231 169 113 145 chr2 225173443 225173532 -28083051 + MIR SINE MIR 34 119 -143 1874 135 7 20 chr2 225173532 225173835 -28082748 - AluJb SINE Alu -7 305 7 231 169 113 145 chr2 225173835 225173869 -28082714 + MIR SINE MIR 119 153 -109 23 0 0 0 chr2 225175394 225175417 -28081166 + AT_rich Low_complexity Low_complexity 1 23 0 216 0 0 0 chr2 225176785 225176809 -28079774 + (TA)n Simple_repeat Simple_repeat 2 25 0 545 117 21 11 chr2 225178261 225178355 -28078228 - AluSg/x SINE Alu -6 303 209 1937 117 0 7 chr2 225178656 225178930 -28077653 + AluSx SINE Alu 39 310 -2 21 0 0 0 chr2 225179879 225179900 -28076683 + AT_rich Low_complexity Low_complexity 1 21 0 361 289 53 35 chr2 225179931 225180045 -28076538 + MIR SINE MIR 36 151 -57 225 180 0 0 chr2 225180643 225180693 -28075890 + CT-rich Low_complexity Low_complexity 1 50 0 352 302 181 7 chr2 225182867 225183016 -28073567 - MER5A DNA MER1_type -6 183 9 2091 136 3 3 chr2 225183259 225183560 -28073023 + AluSx SINE Alu 1 301 -11 2381 90 0 10 chr2 225183823 225184134 -28072449 + AluSq SINE Alu 1 308 -5 3368 177 68 18 chr2 225184142 225184252 -28072331 + L1MB8 LINE L1 5057 5160 -1018 2072 116 17 7 chr2 225184252 225184546 -28072037 + AluSx SINE Alu 1 297 -15 3368 177 68 18 chr2 225184546 225185388 -28071195 + L1MB8 LINE L1 5160 6075 -103 1028 128 59 0 chr2 225185388 225185575 -28071008 + MSTB LTR MaLR 1 198 -228 1353 114 10 10 chr2 225185575 225185768 -28070815 + AluSq SINE Alu 1 193 -120 26 69 0 14 chr2 225185879 225185918 -28070665 + AT_rich Low_complexity Low_complexity 1 40 -31 2209 123 0 0 chr2 225185918 225186210 -28070373 - AluSx SINE Alu -20 292 1 26 69 0 14 chr2 225186210 225186242 -28070341 + AT_rich Low_complexity Low_complexity 40 71 0 900 113 5 38 chr2 225186273 225186459 -28070124 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 27 0 0 0 chr2 225186886 225186913 -28069670 + AT_rich Low_complexity Low_complexity 1 27 0 220 273 0 0 chr2 225187792 225187847 -28068736 - L2 LINE L2 -2 3311 3257 303 289 0 13 chr2 225189294 225189370 -28067213 - MER5C DNA MER1_type -249 75 1 230 0 33 0 chr2 225189396 225189426 -28067157 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 399 322 72 7 chr2 225190408 225190560 -28066023 + MIR SINE MIR 2 163 -99 2153 126 3 0 chr2 225190560 225190861 -28065722 + AluSx SINE Alu 1 302 -10 234 0 0 0 chr2 225193053 225193079 -28063504 + (CA)n Simple_repeat Simple_repeat 1 26 0 1863 151 0 7 chr2 225193680 225193964 -28062619 - AluSx SINE Alu -26 286 5 209 240 40 0 chr2 225194004 225194054 -28062529 + CT-rich Low_complexity Low_complexity 1 52 0 257 146 136 78 chr2 225194132 225194235 -28062348 + L1ME3A LINE L1 5994 6102 -68 198 0 0 0 chr2 225195229 225195251 -28061332 + (CA)n Simple_repeat Simple_repeat 2 23 0 235 306 109 27 chr2 225195438 225195585 -28060998 - MIR SINE MIR -25 237 79 2381 81 3 0 chr2 225195606 225195901 -28060682 - AluSp SINE Alu -13 300 5 2358 73 0 13 chr2 225196764 225197065 -28059518 - AluSc SINE Alu -12 297 1 199 229 104 62 chr2 225197301 225197397 -28059186 - L2 LINE L2 -5 3267 3168 1053 163 0 0 chr2 225197541 225197707 -28058876 - AluJb SINE Alu -18 294 129 198 0 0 0 chr2 225197859 225197881 -28058702 + (T)n Simple_repeat Simple_repeat 1 22 0 2101 110 3 17 chr2 225198225 225198517 -28058066 - AluSx SINE Alu -24 288 1 544 299 98 31 chr2 225198634 225199080 -28057503 - HAL1 LINE L1 -592 1915 1300 25 0 0 0 chr2 225200294 225200319 -28056264 + AT_rich Low_complexity Low_complexity 1 25 0 239 214 21 79 chr2 225203358 225203469 -28053114 - MIR3 SINE MIR -29 179 76 23 33 0 0 chr2 225204770 225204800 -28051783 + AT_rich Low_complexity Low_complexity 1 30 0 1706 102 8 0 chr2 225205229 225205465 -28051118 + AluSp SINE Alu 75 312 -1 328 328 33 8 chr2 225206406 225206528 -28050055 + MIR3 SINE MIR 62 186 -22 26 30 0 0 chr2 225208214 225208247 -28048336 + AT_rich Low_complexity Low_complexity 1 33 0 318 26 0 0 chr2 225208278 225208317 -28048266 + (CA)n Simple_repeat Simple_repeat 1 39 0 230 240 30 50 chr2 225210014 225210114 -28046469 + L1ME4a LINE L1 5959 6056 -65 2042 102 0 66 chr2 225210635 225210969 -28045614 - AluSx SINE Alu 0 312 1 2796 29 0 0 chr2 225211234 225211545 -28045038 - AluY SINE Alu 0 311 1 2521 71 0 0 chr2 225211961 225212272 -28044311 - AluY SINE Alu 0 311 1 2012 89 38 27 chr2 225213834 225214161 -28042422 + AluSx SINE Alu 1 312 0 186 103 0 0 chr2 225216364 225216393 -28040190 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 238 203 0 17 chr2 225218166 225218225 -28038358 + (CA)n Simple_repeat Simple_repeat 2 59 0 2207 99 3 0 chr2 225218916 225219226 -28037357 + AluSx SINE Alu 1 311 0 21 0 0 0 chr2 225219480 225219501 -28037082 + AT_rich Low_complexity Low_complexity 1 21 0 31 68 0 0 chr2 225221258 225221317 -28035266 + GC_rich Low_complexity Low_complexity 1 59 0 649 22 45 0 chr2 225223670 225223759 -28032824 + (TTTC)n Simple_repeat Simple_repeat 4 96 0 695 243 31 35 chr2 225223778 225224037 -28032546 + L1MB7 LINE L1 5927 6184 0 1293 194 16 72 chr2 225224583 225224887 -28031696 + AluJb SINE Alu 1 287 -25 191 53 0 79 chr2 225225139 225225177 -28031406 + (T)n Simple_repeat Simple_repeat 1 35 0 2496 52 0 40 chr2 225226137 225226461 -28030122 + AluY SINE Alu 1 311 0 339 282 60 13 chr2 225226542 225226694 -28029889 - MIR SINE MIR -3 259 102 341 267 83 25 chr2 225227129 225227249 -28029334 + L2 LINE L2 3145 3271 -1 339 326 87 20 chr2 225227303 225227499 -28029084 - MIR SINE MIR -35 227 19 272 223 198 8 chr2 225227764 225227885 -28028698 + MER106B DNA MER1_type 3 146 -913 2274 111 7 0 chr2 225227890 225228188 -28028395 - AluSx SINE Alu -12 300 1 264 296 61 0 chr2 225228344 225228476 -28028107 + LTR33 LTR ERVL 326 465 -56 1994 119 59 0 chr2 225228527 225228813 -28027770 - AluSq SINE Alu -9 304 2 1796 163 0 14 chr2 225229126 225229415 -28027168 - AluJb SINE Alu -27 285 1 2057 113 7 0 chr2 225229935 225230247 -28026336 - AluSx SINE Alu 0 314 1 829 143 0 8 chr2 225230458 225230591 -28025992 - FLAM_C SINE Alu 0 133 2 21 0 0 0 chr2 225230683 225230704 -28025879 + AT_rich Low_complexity Low_complexity 1 21 0 289 219 37 0 chr2 225231101 225231183 -28025400 - L1MA10 LINE L1 -1 6333 6249 407 270 11 63 chr2 225231893 225232067 -28024516 + MLT1J2 LTR MaLR 1 165 -285 1964 197 75 7 chr2 225232598 225233035 -28023548 + MLT1C LTR MaLR 1 467 0 827 282 140 57 chr2 225233425 225234381 -28022202 + HAL1 LINE L1 19 1054 -1453 696 177 34 26 chr2 225234393 225234630 -28021953 + MLT1B LTR MaLR 136 385 -5 1245 212 68 21 chr2 225234744 225235069 -28021514 + MER58B DNA MER1_type 2 341 0 2287 152 14 30 chr2 225235256 225235313 -28021270 + MSTB LTR MaLR 1 57 -369 2164 133 58 3 chr2 225235313 225235658 -28020925 - THE1B LTR MaLR 0 364 1 2287 152 14 30 chr2 225235658 225236033 -28020550 + MSTB LTR MaLR 57 426 0 195 351 30 60 chr2 225236310 225236444 -28020139 + L2 LINE L2 3175 3304 -9 23 33 0 0 chr2 225237343 225237373 -28019210 + AT_rich Low_complexity Low_complexity 1 30 0 325 305 51 0 chr2 225237377 225237495 -28019088 + MIR3 SINE MIR 54 177 -31 476 256 213 34 chr2 225238867 225239074 -28017509 + L3 LINE CR1 1333 1576 -1 333 182 39 0 chr2 225240547 225240624 -28015959 - MER116 DNA Mariner 0 80 1 1585 126 0 0 chr2 225240645 225240852 -28015731 - AluSg/x SINE Alu -18 292 86 1151 124 0 0 chr2 225240854 225241007 -28015576 - AluSq SINE Alu -160 153 1 1974 161 173 36 chr2 225241012 225241515 -28015068 - MLT1E2 LTR MaLR -4 622 51 568 276 102 49 chr2 225241528 225241774 -28014809 + MIR SINE MIR 4 262 0 219 296 0 0 chr2 225241776 225241830 -28014753 + GA-rich Low_complexity Low_complexity 3 56 0 2046 136 10 0 chr2 225242187 225242482 -28014101 - AluSx SINE Alu -14 298 1 303 172 0 140 chr2 225242822 225242915 -28013668 - MADE1 DNA Mariner 0 80 1 903 320 53 30 chr2 225242963 225243472 -28013111 + MLT1K LTR MaLR 61 581 -7 329 152 11 130 chr2 225244339 225244388 -28012195 - MIR3 SINE MIR -17 191 156 2174 124 3 0 chr2 225244388 225244694 -28011889 - AluSx SINE Alu -5 307 1 329 152 11 130 chr2 225244694 225244736 -28011847 - MIR3 SINE MIR -52 156 111 490 252 67 52 chr2 225244956 225245166 -28011417 - L1MC5 LINE L1 -31 7930 7718 183 343 10 49 chr2 225246843 225246945 -28009638 + MIR SINE MIR 37 134 -128 513 362 65 50 chr2 225247057 225247455 -28009128 - L2 LINE L2 -3 3269 2866 1745 187 27 24 chr2 225247745 225248119 -28008464 + THE1C LTR MaLR 1 375 0 2404 81 3 0 chr2 225248261 225248569 -28008014 + AluY SINE Alu 1 309 -2 236 239 36 87 chr2 225248613 225248751 -28007832 + LTR67 LTR ERVL 427 557 0 2367 99 0 0 chr2 225249013 225249316 -28007267 + AluSx SINE Alu 1 303 -9 24 0 0 0 chr2 225249492 225249516 -28007067 + AT_rich Low_complexity Low_complexity 1 24 0 2279 75 0 0 chr2 225249520 225249836 -28006747 + AluY SINE Alu 1 316 0 736 271 61 52 chr2 225251297 225251607 -28004976 - MLT1K LTR MaLR -2 586 274 10421 120 36 36 chr2 225252190 225252393 -28004190 - Tigger1 DNA MER2_type 0 2418 2216 2244 110 0 0 chr2 225252393 225252703 -28003880 + AluSg SINE Alu 1 310 0 10421 120 36 36 chr2 225252703 225253461 -28003122 - Tigger1 DNA MER2_type -202 2216 1459 2395 71 3 16 chr2 225253461 225253772 -28002811 + AluSc SINE Alu 1 307 -2 10421 120 36 36 chr2 225253772 225254288 -28002295 - Tigger1 DNA MER2_type -959 1459 944 2324 110 7 0 chr2 225254288 225254598 -28001985 - AluSx SINE Alu 0 312 1 10421 120 36 36 chr2 225254598 225255537 -28001046 - Tigger1 DNA MER2_type -1474 944 5 2402 88 3 0 chr2 225255537 225255844 -28000739 + AluSp SINE Alu 1 308 -5 750 142 0 88 chr2 225256630 225256662 -27999921 - FLAM_C SINE Alu -177 135 102 2220 115 0 0 chr2 225256662 225256972 -27999611 + AluSq SINE Alu 1 310 0 750 142 0 88 chr2 225256972 225257086 -27999497 - FLAM_C SINE Alu -210 102 1 2696 107 3 0 chr2 225258333 225258696 -27997887 + THE1B LTR MaLR 1 364 0 190 277 145 72 chr2 225258831 225258914 -27997669 - L2 LINE L2 -36 3236 3148 323 282 33 55 chr2 225260451 225260632 -27995951 + L1 LINE L1 3555 3731 -2415 927 231 37 19 chr2 225261911 225262236 -27994347 + MER69 DNA AcHobo 2029 2359 -167 813 162 0 15 chr2 225262260 225262396 -27994187 + AluJb SINE Alu 1 134 -178 230 242 0 0 chr2 225262542 225262608 -27993975 + A-rich Low_complexity Low_complexity 1 66 0 2374 78 3 0 chr2 225262933 225263229 -27993354 - AluY SINE Alu -14 297 1 24 32 0 0 chr2 225263291 225263322 -27993261 + AT_rich Low_complexity Low_complexity 1 31 0 183 80 0 0 chr2 225264499 225264524 -27992059 + (TG)n Simple_repeat Simple_repeat 2 26 0 694 279 61 53 chr2 225264956 225265350 -27991233 + LTR33 LTR ERVL 101 497 -24 576 303 73 50 chr2 225266842 225267142 -27989441 - L2 LINE L2 -30 3283 2977 2295 95 10 3 chr2 225267185 225267491 -27989092 + AluSx SINE Alu 2 309 -3 1252 176 46 16 chr2 225267492 225267798 -27988785 - MER33 DNA MER1_type 0 324 10 1258 262 30 3 chr2 225268534 225268866 -27987717 - MER58B DNA MER1_type 0 341 1 215 263 7 58 chr2 225268897 225269034 -27987549 + CT-rich Low_complexity Low_complexity 3 132 0 2267 107 27 0 chr2 225270901 225271199 -27985384 - AluSx SINE Alu -6 306 1 1811 269 74 25 chr2 225271199 225271764 -27984819 + MLT1G1 LTR MaLR 1 593 -2 681 312 108 4 chr2 225272842 225273073 -27983510 + MIR SINE MIR 8 262 0 2804 85 27 0 chr2 225273597 225274008 -27982575 + L1PA13 LINE L1 5740 6161 -2 565 285 136 5 chr2 225274648 225274869 -27981714 + LTR33A LTR ERVL 7 256 -267 292 291 27 0 chr2 225274897 225275007 -27981576 + LTR33A LTR ERVL 411 523 0 5264 154 31 27 chr2 225275492 225276618 -27979965 - L1MC2 LINE L1 -33 6311 5183 240 284 35 60 chr2 225277235 225277351 -27979232 + MIR SINE MIR 2 114 -148 340 292 143 9 chr2 225277980 225278436 -27978147 + L1ME4a LINE L1 5482 5998 -123 579 214 104 7 chr2 225278444 225278598 -27977985 - MLT1J2 LTR MaLR -2 448 280 373 213 96 37 chr2 225278643 225278779 -27977804 - MLT1J2 LTR MaLR -269 181 38 468 111 0 0 chr2 225279500 225279572 -27977011 + (TTCC)n Simple_repeat Simple_repeat 1 72 0 1242 150 49 16 chr2 225279789 225280192 -27976391 + L1MC/D LINE L1 5186 5607 -743 242 264 61 78 chr2 225280336 225280567 -27976016 + HAL1 LINE L1 2225 2451 -56 1107 190 15 38 chr2 225281171 225281434 -27975149 - L1MC1 LINE L1 -6 6327 6071 1040 183 5 0 chr2 225281440 225281626 -27974957 - MER54B LTR ERVL -4 789 603 1097 141 11 0 chr2 225281738 225281929 -27974654 + L1MC/D LINE L1 5414 5606 -727 7374 78 6 19 chr2 225283527 225284598 -27971985 + MER11C LTR ERVK 1 1057 -14 1615 160 4 0 chr2 225284886 225285124 -27971459 + AluSx SINE Alu 53 291 -21 640 314 89 38 chr2 225286681 225287053 -27969530 + L3b LINE CR1 1117 1507 -76 252 0 0 0 chr2 225287297 225287325 -27969258 + (TG)n Simple_repeat Simple_repeat 2 29 0 597 176 14 14 chr2 225287452 225287600 -27968983 + CT-rich Low_complexity Low_complexity 3 150 0 2176 107 0 0 chr2 225288313 225288603 -27967980 + AluSc SINE Alu 14 303 -6 226 169 113 42 chr2 225288708 225288779 -27967804 - L1MC5 LINE L1 -54 7907 7832 201 39 0 0 chr2 225288822 225288848 -27967735 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1983 184 63 35 chr2 225288985 225289475 -27967108 - MLT1D LTR MaLR 0 505 2 2059 101 29 0 chr2 225289723 225290029 -27966554 + AluSx SINE Alu 1 314 0 2338 37 0 0 chr2 225292795 225293065 -27963518 + AluY SINE Alu 35 304 -7 235 256 141 0 chr2 225293855 225293933 -27962650 - MIR3 SINE MIR -53 155 67 21 57 0 0 chr2 225293933 225293968 -27962615 + AT_rich Low_complexity Low_complexity 1 35 0 202 200 0 0 chr2 225295562 225295602 -27960981 + (TTCA)n Simple_repeat Simple_repeat 1 40 0 700 251 91 39 chr2 225295891 225296122 -27960461 - MIR SINE MIR 0 262 20 2324 118 19 14 chr2 225296153 225296517 -27960066 + MER47A DNA MER2_type 1 366 0 1224 127 0 0 chr2 225296534 225296700 -27959883 + AluSg/x SINE Alu 132 297 -15 3712 69 2 4 chr2 225296742 225297223 -27959360 + L1PA7 LINE L1 5675 6154 0 277 274 63 0 chr2 225297223 225297318 -27959265 - L1MC4 LINE L1 -40 8002 7902 528 247 40 45 chr2 225297402 225297666 -27958917 - L1MC4 LINE L1 -239 7569 7314 704 266 70 23 chr2 225297714 225297970 -27958613 - L1MC4 LINE L1 -1041 7001 6734 330 150 17 0 chr2 225297997 225298057 -27958526 - L1MB2 LINE L1 -8 6163 6103 511 292 131 56 chr2 225298058 225298418 -27958165 - L1MC4a LINE L1 -1145 6663 6277 288 0 0 0 chr2 225298537 225298569 -27958014 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 570 292 101 41 chr2 225298645 225299187 -27957396 - L2 LINE L2 -140 3173 2533 1881 254 203 13 chr2 225299357 225299431 -27957152 - L1MC4 LINE L1 -95 7713 7654 1916 130 27 33 chr2 225299431 225299730 -27956853 - AluSx SINE Alu -15 297 1 1881 254 203 13 chr2 225299730 225300628 -27955955 - L1MC4 LINE L1 -154 7654 6666 445 189 9 38 chr2 225300627 225300733 -27955850 + L1MC4 LINE L1 7260 7362 -680 * 677 256 126 8 chr2 225300735 225300989 -27955594 - L1MC4 LINE L1 -1298 6744 6461 200 234 0 16 chr2 225301876 225301940 -27954643 + GA-rich Low_complexity Low_complexity 1 63 0 2221 119 0 0 chr2 225303259 225303553 -27953030 - AluSx SINE Alu -18 294 1 525 221 43 0 chr2 225303582 225303719 -27952864 - LTR16A1 LTR ERVL 0 457 315 2962 64 15 17 chr2 225303719 225304124 -27952459 + MLT2A1 LTR ERVL 1 404 -40 298 108 31 0 chr2 225304180 225304245 -27952338 + (TA)n Simple_repeat Simple_repeat 1 67 0 318 59 78 0 chr2 225304245 225304296 -27952287 + MLT2A1 LTR ERVL 390 444 0 30 0 0 0 chr2 225304801 225304831 -27951752 + AT_rich Low_complexity Low_complexity 1 30 0 296 333 63 28 chr2 225305402 225305654 -27950929 - HERV16 LTR ERVL -711 4285 4025 393 274 102 19 chr2 225305888 225306121 -27950462 - Charlie8 DNA MER1_type -1002 1415 59 255 228 0 0 chr2 225306154 225306211 -27950372 - LTR33 LTR ERVL -464 57 1 1645 207 32 45 chr2 225306263 225306640 -27949943 - MLT1B LTR MaLR 0 390 19 966 209 41 0 chr2 225307254 225307426 -27949157 + MER5A DNA MER1_type 11 189 0 460 293 21 49 chr2 225307637 225307822 -27948761 - MIR SINE MIR -48 214 35 797 253 5 5 chr2 225307917 225308115 -27948468 - MER105 DNA DNA -5 199 2 183 349 83 42 chr2 225308228 225308420 -27948163 + MIR3 SINE MIR 6 205 -3 1552 195 7 4 chr2 225309777 225310054 -27946529 + AluJb SINE Alu 1 278 -34 394 299 76 28 chr2 225310320 225310464 -27946119 - L2 LINE L2 0 3313 3163 998 307 180 48 chr2 225310533 225310730 -27945853 - L2 LINE L2 -411 2903 2733 1534 193 40 0 chr2 225310730 225311004 -27945579 + AluSx SINE Alu 15 299 -13 2250 171 36 8 chr2 225311010 225311395 -27945188 + MSTD LTR MaLR 1 396 0 998 307 180 48 chr2 225311395 225311675 -27944908 - L2 LINE L2 -585 2729 2487 2192 125 3 3 chr2 225311675 225311979 -27944604 + AluSx SINE Alu 1 304 -8 998 307 180 48 chr2 225311979 225312328 -27944255 - L2 LINE L2 -827 2487 1959 1557 129 60 8 chr2 225312739 225312987 -27943596 + AluSx SINE Alu 37 297 -15 1992 122 51 3 chr2 225314380 225314675 -27941908 + AluSx SINE Alu 1 309 -3 21 36 0 0 chr2 225314984 225315012 -27941571 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 225315442 225315463 -27941120 + AT_rich Low_complexity Low_complexity 1 21 0 1066 184 33 40 chr2 225316079 225316360 -27940223 + MLT1B LTR MaLR 131 390 0 1846 148 33 25 chr2 225316393 225316766 -27939817 - Tigger3(Golem) DNA MER2_type -1 3028 1 526 247 111 15 chr2 225316782 225316950 -27939633 + MIR SINE MIR 63 252 -10 228 292 92 0 chr2 225316998 225317063 -27939520 + MIR SINE MIR 37 107 -155 344 263 34 73 chr2 225317586 225317765 -27938818 - L1ME4a LINE L1 -212 5909 5738 2359 158 17 21 chr2 225319236 225319705 -27936878 + L1MB3 LINE L1 5210 5677 -506 1989 167 121 21 chr2 225319782 225320171 -27936412 + MSTA LTR MaLR 1 428 0 10409 135 12 26 chr2 225320173 225321772 -27934811 + MSTA-int LTR MaLR 3 1580 0 2201 126 123 18 chr2 225321772 225322153 -27934430 + MSTA LTR MaLR 1 421 -7 389 151 0 14 chr2 225322153 225322226 -27934357 + L1MB3 LINE L1 5709 5780 -391 1551 144 88 11 chr2 225322227 225322511 -27934072 + L1MB3 LINE L1 5876 6181 -2 2308 90 7 0 chr2 225323815 225324114 -27932469 + AluSp SINE Alu 1 301 -12 230 162 0 0 chr2 225324647 225324684 -27931899 + LTR33A LTR ERVL 347 383 -140 411 288 0 9 chr2 225324729 225324840 -27931743 + MER63 DNA MER1_type 691 800 -262 572 91 11 0 chr2 225324932 225325020 -27931563 + (TTCC)n Simple_repeat Simple_repeat 4 92 0 265 335 50 35 chr2 225325084 225325344 -27931239 - L1ME4a LINE L1 -2166 5642 5379 681 261 80 61 chr2 225325516 225325780 -27930803 + MLT1A2 LTR MaLR 1 269 -105 523 304 103 57 chr2 225326039 225326706 -27929877 + L2 LINE L2 2228 2925 -389 1713 38 0 14 chr2 225326741 225326951 -27929632 - AluY SINE Alu -6 305 99 220 167 0 33 chr2 225326988 225327048 -27929535 + (TTTA)n Simple_repeat Simple_repeat 1 58 0 597 294 7 0 chr2 225327055 225327191 -27929392 + L2 LINE L2 3134 3270 -2 2267 152 25 3 chr2 225328691 225329047 -27927536 - THE1B LTR MaLR 0 364 1 430 248 130 8 chr2 225330392 225330583 -27926000 - L1ME1 LINE L1 -233 5937 5726 334 315 87 58 chr2 225330584 225330930 -27925653 - L2 LINE L2 -859 2455 2100 840 234 8 75 chr2 225330987 225331226 -27925357 + MER58A DNA MER1_type 1 223 -1 189 0 0 0 chr2 225332148 225332169 -27924414 + (CA)n Simple_repeat Simple_repeat 2 22 0 543 239 5 127 chr2 225332176 225332326 -27924257 - MER5B DNA MER1_type -5 173 51 2617 36 0 3 chr2 225332326 225332628 -27923955 + AluY SINE Alu 1 301 -10 543 239 5 127 chr2 225332628 225332674 -27923909 - MER5B DNA MER1_type -127 51 1 996 237 5 0 chr2 225333095 225333281 -27923302 - MER5A DNA MER1_type -2 187 1 366 198 76 151 chr2 225334784 225334956 -27921627 + MER5B DNA MER1_type 17 175 -3 252 259 0 17 chr2 225335082 225335140 -27921443 - MER5B DNA MER1_type 0 178 122 1230 140 29 0 chr2 225335147 225335354 -27921229 + AluSx SINE Alu 1 213 -99 2073 102 0 24 chr2 225335497 225335790 -27920793 + L1PA8 LINE L1 5887 6172 0 898 241 69 33 chr2 225335874 225336177 -27920406 - L1MC4 LINE L1 -544 7498 7185 1209 193 29 0 chr2 225336300 225336543 -27920040 - L1MB5 LINE L1 0 6174 5925 2103 97 28 3 chr2 225336712 225337001 -27919582 + AluSg SINE Alu 1 296 -14 1127 276 101 34 chr2 225337358 225337833 -27918750 + MLT1J LTR MaLR 5 511 0 662 164 0 0 chr2 225338574 225338678 -27917905 + AluJo SINE Alu 32 135 -177 1602 194 23 3 chr2 225338678 225338982 -27917601 + AluJb SINE Alu 1 310 -2 303 71 0 0 chr2 225339212 225339254 -27917329 + (CA)n Simple_repeat Simple_repeat 1 42 0 1060 106 6 59 chr2 225339414 225339584 -27916999 + AluSg/x SINE Alu 143 303 -7 2304 95 0 0 chr2 225340518 225340812 -27915771 - AluSg SINE Alu -11 299 6 1224 256 67 54 chr2 225341106 225341602 -27914981 - LTR33A LTR ERVL -21 502 1 2254 79 0 4 chr2 225341884 225342164 -27914419 - L1PA7 LINE L1 -8 6146 5868 289 0 0 0 chr2 225342165 225342197 -27914386 + L1PA7 LINE L1 5834 5865 -266 588 114 0 0 chr2 225342438 225342517 -27914066 - AluS SINE Alu -11 301 223 919 212 89 10 chr2 225342741 225342944 -27913639 + MER20 DNA MER1_type 1 219 0 848 139 39 8 chr2 225343325 225343454 -27913129 + FLAM_A SINE Alu 1 133 0 358 219 22 34 chr2 225343913 225344091 -27912492 + (TA)n Simple_repeat Simple_repeat 2 177 0 2290 152 73 75 chr2 225344803 225345173 -27911410 - MLT1C LTR MaLR 0 467 97 2127 138 0 16 chr2 225345173 225345484 -27911099 - AluSx SINE Alu -6 306 1 2290 152 73 75 chr2 225345484 225345581 -27911002 - MLT1C LTR MaLR -370 97 1 429 294 81 109 chr2 225346659 225347241 -27909342 + L2 LINE L2 2703 3271 -1 798 285 24 1 chr2 225347323 225347552 -27909031 + L1ME3 LINE L1 5931 6170 0 1727 228 51 41 chr2 225348247 225348734 -27907849 - L1M2b LINE L1 -6705 504 13 405 0 0 0 chr2 225348836 225348881 -27907702 + (CA)n Simple_repeat Simple_repeat 1 45 0 1654 212 0 3 chr2 225348927 225349229 -27907354 + AluJb SINE Alu 1 301 -11 496 161 12 0 chr2 225349232 225349313 -27907270 - MLT1G1 LTR MaLR -32 563 482 253 336 55 27 chr2 225349646 225349866 -27906717 - LTR33A LTR ERVL -1 522 297 740 82 0 0 chr2 225349961 225350058 -27906525 + MER41B LTR ERV1 1 97 -538 1587 178 38 29 chr2 225350058 225350475 -27906108 - pTR5 LTR ERV1 -1275 1163 743 497 278 81 24 chr2 225350556 225350765 -27905818 - LTR50 LTR ERVL -572 223 3 1717 172 3 35 chr2 225351114 225351428 -27905155 + AluJo SINE Alu 5 308 -4 499 244 96 26 chr2 225352246 225352402 -27904181 - MER5A DNA MER1_type 0 189 23 379 259 92 38 chr2 225352488 225352619 -27903964 - L2 LINE L2 -1 3271 3134 193 270 143 0 chr2 225353090 225353153 -27903430 - L2 LINE L2 -4 3268 3197 6343 146 10 12 chr2 225353156 225353424 -27903159 + L1MA4 LINE L1 4998 5265 -1035 3886 124 24 0 chr2 225353424 225353965 -27902618 - MER41C LTR ERV1 0 554 1 6343 146 10 12 chr2 225353965 225355004 -27901579 + L1MA4 LINE L1 5265 6299 -1 197 138 0 0 chr2 225355028 225355057 -27901526 - L2 LINE L2 -96 3176 3148 333 322 35 17 chr2 225355213 225355328 -27901255 + MIR SINE MIR 22 138 -70 23 68 0 0 chr2 225355752 225355796 -27900787 + AT_rich Low_complexity Low_complexity 1 44 0 2285 151 6 0 chr2 225355823 225356160 -27900423 - MER2 DNA MER2_type -1 343 5 2181 99 14 3 chr2 225357462 225357755 -27898828 + AluSx SINE Alu 1 296 -16 502 257 189 0 chr2 225357959 225358134 -27898449 - MIR SINE MIR -44 218 11 215 188 51 26 chr2 225359675 225359792 -27896791 + (TA)n Simple_repeat Simple_repeat 1 120 0 283 270 75 38 chr2 225359893 225360052 -27896531 + MIR3 SINE MIR 20 184 -24 2224 92 0 7 chr2 225360579 225360902 -27895681 + AluY SINE Alu 1 311 0 2071 170 8 18 chr2 225360950 225361344 -27895239 + MLT1B LTR MaLR 1 390 0 2114 101 16 3 chr2 225361987 225362294 -27894289 - AluY SINE Alu 0 311 1 319 284 96 49 chr2 225362947 225363013 -27893570 - MIR SINE MIR -7 255 194 2386 86 0 13 chr2 225363013 225363328 -27893255 - AluY SINE Alu 0 311 1 319 284 96 49 chr2 225363328 225363503 -27893080 - MIR SINE MIR -68 194 8 1834 166 54 9 chr2 225363518 225363867 -27892716 - MLT1A1 LTR MaLR 0 365 1 1902 160 40 24 chr2 225364197 225364571 -27892012 - MLT1B LTR MaLR 0 390 11 2129 116 11 53 chr2 225365297 225365677 -27890906 + THE1B LTR MaLR 1 364 0 1266 189 107 11 chr2 225365717 225366072 -27890511 - Charlie5 DNA MER1_type 0 2624 2236 42 0 0 0 chr2 225366074 225366116 -27890467 + AT_rich Low_complexity Low_complexity 1 42 0 467 310 76 11 chr2 225366318 225366502 -27890081 + MIR3 SINE MIR 3 198 -10 215 30 0 30 chr2 225367452 225367485 -27889098 + (TA)n Simple_repeat Simple_repeat 2 33 0 689 251 153 3 chr2 225367498 225367826 -27888757 + MLT2C1 LTR ERVL 17 663 0 227 299 41 21 chr2 225367937 225368034 -27888549 - L1ME LINE L1 -353 5768 5670 31 0 0 0 chr2 225368142 225368173 -27888410 + AT_rich Low_complexity Low_complexity 1 31 0 365 195 17 17 chr2 225368217 225368335 -27888248 + (TA)n Simple_repeat Simple_repeat 1 118 0 1193 199 40 117 chr2 225368384 225368424 -27888159 - MLT2C1 LTR ERVL 0 397 355 273 29 0 0 chr2 225368424 225368458 -27888125 + (TG)n Simple_repeat Simple_repeat 1 34 0 1193 199 40 117 chr2 225368458 225368646 -27887937 - MLT2C1 LTR ERVL -42 355 215 671 200 0 0 chr2 225368646 225368776 -27887807 + L1PB4 LINE L1 6027 6156 0 1193 199 40 117 chr2 225368776 225368974 -27887609 - MLT2C1 LTR ERVL -182 215 3 326 353 62 44 chr2 225369619 225369959 -27886624 - L2 LINE L2 -558 2756 2411 254 328 0 0 chr2 225370236 225370300 -27886283 - MER5B DNA MER1_type -57 121 58 787 139 39 8 chr2 225370574 225370703 -27885880 - FLAM_A SINE Alu 0 133 1 838 222 84 5 chr2 225371084 225371287 -27885296 - MER20 DNA MER1_type 0 219 1 549 114 0 0 chr2 225371511 225371590 -27884993 + AluS SINE Alu 223 301 -11 286 0 0 0 chr2 225371831 225371863 -27884720 - L1PA7 LINE L1 -266 5865 5834 2102 79 0 4 chr2 225371864 225372144 -27884439 + L1PA7 LINE L1 5868 6146 -8 1216 256 67 54 chr2 225372426 225372922 -27883661 + LTR33A LTR ERVL 1 502 -21 2291 95 0 0 chr2 225373216 225373510 -27883073 + AluSg SINE Alu 6 299 -11 192 364 136 9 chr2 225373711 225373821 -27882762 - L2 LINE L2 -2 3311 3188 2334 70 3 32 chr2 225374445 225374758 -27881825 - AluSg1 SINE Alu -5 304 1 241 247 22 22 chr2 225374850 225374939 -27881644 - L1MC4 LINE L1 -1340 6702 6614 272 408 24 0 chr2 225375245 225375370 -27881213 + L2 LINE L2 3143 3270 -2 216 255 0 0 chr2 225378199 225378246 -27878337 + (TTCA)n Simple_repeat Simple_repeat 1 47 0 1079 297 98 35 chr2 225378286 225378386 -27878197 + L2 LINE L2 2359 2451 -863 2286 93 3 10 chr2 225378386 225378697 -27877886 - AluSq SINE Alu -4 309 1 1079 297 98 35 chr2 225378697 225379165 -27877418 + L2 LINE L2 2451 2963 -351 1955 99 42 3 chr2 225381015 225381320 -27875263 + AluSq SINE Alu 1 313 0 526 272 27 65 chr2 225381472 225381656 -27874927 - MER45A DNA AcHobo -1 177 1 2043 134 0 0 chr2 225381948 225382271 -27874312 - AluSx SINE Alu 0 323 1 352 250 56 0 chr2 225382287 225382359 -27874224 - L2 LINE L2 -46 3267 3192 2290 105 3 0 chr2 225382798 225383103 -27873480 - AluSp SINE Alu -3 310 5 2147 133 0 0 chr2 225384872 225385173 -27871410 + AluSx SINE Alu 1 301 -11 2304 267 75 26 chr2 225385357 225386437 -27870146 + L1MC5 LINE L1 4788 5321 -825 1850 190 34 6 chr2 225386437 225386790 -27869793 - MLT1A1 LTR MaLR 0 365 3 2304 267 75 26 chr2 225386790 225386874 -27869709 + L1MC5 LINE L1 5321 5399 -747 950 239 63 72 chr2 225387302 225387861 -27868722 + L1MC5 LINE L1 6536 7016 -792 733 246 10 20 chr2 225387860 225388106 -27868477 + L1MC5 LINE L1 7011 7252 -728 * 275 306 0 0 chr2 225388140 225388225 -27868358 + L1MC4 LINE L1 7360 7444 -598 521 234 0 35 chr2 225388236 225388381 -27868202 + L1MC5 LINE L1 7304 7443 -518 1258 242 12 8 chr2 225388532 225388856 -27867727 + MER93b LTR ERV1 70 373 0 623 263 74 33 chr2 225388869 225389261 -27867322 + L1MC5 LINE L1 7476 7883 -78 21 0 0 0 chr2 225391330 225391351 -27865232 + AT_rich Low_complexity Low_complexity 1 21 0 198 262 58 87 chr2 225391883 225391986 -27864597 - MIR SINE MIR -128 134 35 1791 212 41 45 chr2 225392345 225392455 -27864128 - Charlie4a DNA MER1_type -1453 508 399 1688 180 25 0 chr2 225392455 225392739 -27863844 + AluJb SINE Alu 11 301 -11 1791 212 41 45 chr2 225392739 225392957 -27863626 - Charlie4a DNA MER1_type -1562 399 180 2092 59 4 0 chr2 225392957 225393228 -27863355 + L1PA5 LINE L1 5881 6152 -2 1791 212 41 45 chr2 225393228 225393408 -27863175 - Charlie4a DNA MER1_type -1781 180 1 959 244 15 0 chr2 225394549 225394754 -27861829 + MER63A DNA MER1_type 2 209 -1 231 343 244 28 chr2 225395295 225395508 -27861075 - L3 LINE CR1 -1134 443 185 1203 205 4 11 chr2 225395606 225395869 -27860714 - L1MB8 LINE L1 -14 6164 5904 252 128 0 0 chr2 225395880 225395919 -27860664 - MADE1 DNA Mariner -40 40 2 481 161 0 0 chr2 225395920 225396001 -27860582 - L1MB8 LINE L1 -272 5906 5826 1412 220 36 20 chr2 225396030 225396421 -27860162 - L1MB8 LINE L1 -906 5240 4844 527 335 122 8 chr2 225396589 225396843 -27859740 + L3 LINE CR1 604 886 -691 207 0 0 0 chr2 225397038 225397061 -27859522 + (TA)n Simple_repeat Simple_repeat 2 24 0 3218 123 23 89 chr2 225397061 225397274 -27859309 + Tigger3(Golem) DNA MER2_type 3 229 -2800 2186 129 0 3 chr2 225397274 225397576 -27859007 + AluSx SINE Alu 1 301 -11 3218 123 23 89 chr2 225397576 225397791 -27858792 + Tigger3(Golem) DNA MER2_type 229 457 -2572 2252 112 0 13 chr2 225397791 225398104 -27858479 + AluSq SINE Alu 1 309 -4 3218 123 23 89 chr2 225398104 225398305 -27858278 + Tigger3(Golem) DNA MER2_type 457 670 -2359 1558 189 32 11 chr2 225398305 225398586 -27857997 + AluJo SINE Alu 3 289 -23 3218 123 23 89 chr2 225398586 225398955 -27857628 + Tigger3(Golem) DNA MER2_type 670 2730 -299 3668 73 48 0 chr2 225399157 225399450 -27857133 - LTR49 LTR ERV1 -5 590 343 7568 128 16 43 chr2 225399450 225400086 -27856497 + HSMAR2 DNA Mariner 2 585 -717 1747 175 3 0 chr2 225400086 225400371 -27856212 - AluSx SINE Alu -26 286 1 7568 128 16 43 chr2 225400371 225401070 -27855513 + HSMAR2 DNA Mariner 585 1301 -1 3668 73 48 0 chr2 225401070 225401419 -27855164 - LTR49 LTR ERV1 -252 343 1 600 324 131 47 chr2 225401575 225401980 -27854603 + L3 LINE CR1 1065 1503 -74 282 29 0 0 chr2 225402831 225402866 -27853717 + (CA)n Simple_repeat Simple_repeat 2 36 0 375 326 76 0 chr2 225403512 225403656 -27852927 + MIR SINE MIR 51 205 -57 24 77 0 0 chr2 225403712 225403764 -27852819 + AT_rich Low_complexity Low_complexity 1 52 0 3350 167 16 9 chr2 225404349 225404854 -27851729 + MLT2B3 LTR ERVL 1 512 -42 554 41 14 0 chr2 225404854 225404927 -27851656 + (TCTA)n Simple_repeat Simple_repeat 3 76 0 3350 167 16 9 chr2 225404927 225404971 -27851612 + MLT2B3 LTR ERVL 512 554 0 451 395 75 22 chr2 225405021 225405434 -27851149 + L2 LINE L2 2838 3272 0 359 215 46 62 chr2 225407200 225407330 -27849253 + MER112 DNA MER1_type 8 135 -125 1976 281 63 30 chr2 225407331 225408061 -27848522 - L2 LINE L2 -391 2923 2170 806 288 109 37 chr2 225408076 225408451 -27848132 - LTR16C LTR ERVL 0 491 90 591 254 237 9 chr2 225408485 225408831 -27847752 - L2 LINE L2 -1164 2150 1726 1904 157 4 0 chr2 225409118 225409399 -27847184 + AluSx SINE Alu 1 282 -30 276 53 0 0 chr2 225410358 225410396 -27846187 + (TG)n Simple_repeat Simple_repeat 1 38 0 2749 95 31 5 chr2 225410458 225410846 -27845737 + MLT2A1 LTR ERVL 1 398 -46 198 0 0 0 chr2 225410846 225410868 -27845715 + (TG)n Simple_repeat Simple_repeat 2 23 0 345 287 0 0 chr2 225410894 225410981 -27845602 - L1MC4 LINE L1 -1339 6703 6617 565 81 14 0 chr2 225410989 225411063 -27845520 - MLT1B LTR MaLR -315 75 1 210 216 0 0 chr2 225411076 225411113 -27845470 + (TG)n Simple_repeat Simple_repeat 1 37 0 225 253 22 22 chr2 225411113 225411204 -27845379 - L1MC4 LINE L1 -1340 6702 6612 237 65 0 0 chr2 225411270 225411301 -27845282 + (CA)n Simple_repeat Simple_repeat 2 32 0 241 25 100 25 chr2 225411303 225411343 -27845240 + MLT2A2 LTR ERVL 411 453 0 363 260 78 134 chr2 225411527 225411862 -27844721 - MER102b DNA MER1_type -25 316 1 559 237 23 23 chr2 225412023 225412154 -27844429 + L1ME3 LINE L1 6003 6133 -29 464 224 22 34 chr2 225412178 225412357 -27844226 + (TA)n Simple_repeat Simple_repeat 1 177 0 408 187 35 29 chr2 225412396 225412897 -27843686 + (TA)n Simple_repeat Simple_repeat 1 503 0 361 259 79 7 chr2 225413081 225413220 -27843363 + L1ME4a LINE L1 5962 6110 -11 550 247 48 7 chr2 225414213 225414359 -27842224 + MLT1I LTR MaLR 247 398 -11 3756 101 35 0 chr2 225414362 225414897 -27841686 - MER41A LTR ERV1 0 554 1 416 297 72 0 chr2 225418548 225418686 -27837897 + L2 LINE L2 3121 3268 -4 22 0 0 0 chr2 225419080 225419102 -27837481 + AT_rich Low_complexity Low_complexity 1 22 0 437 270 101 13 chr2 225419718 225419877 -27836706 + MIR SINE MIR 47 219 -43 2222 101 3 7 chr2 225420174 225420480 -27836103 - AluSg SINE Alu -5 305 1 22 0 0 30 chr2 225421611 225421623 -27834960 + AT_rich Low_complexity Low_complexity 1 12 -20 1221 47 0 0 chr2 225421623 225421772 -27834811 + L1PA6 LINE L1 6001 6149 -5 22 0 0 30 chr2 225421772 225421792 -27834791 + AT_rich Low_complexity Low_complexity 12 32 0 263 294 115 43 chr2 225422268 225422547 -27834036 + L1ME4a LINE L1 5586 5884 -237 9339 171 78 59 chr2 225422596 225424453 -27832130 + L1MC3 LINE L1 5218 7225 -560 232 337 20 10 chr2 225424453 225424551 -27832032 + MLT1F1 LTR MaLR 35 133 -434 9339 171 78 59 chr2 225424551 225424961 -27831622 + L1MC3 LINE L1 7225 7626 -159 207 88 0 0 chr2 225425102 225425136 -27831447 + (TAGA)n Simple_repeat Simple_repeat 1 34 0 258 222 111 0 chr2 225425147 225425246 -27831337 + L1ME4a LINE L1 5960 6069 -52 388 92 67 0 chr2 225425902 225426021 -27830562 + (TA)n Simple_repeat Simple_repeat 2 128 0 18005 193 12 17 chr2 225426070 225426450 -27830133 - L1PA15 LINE L1 -4 7599 7219 518 101 0 13 chr2 225426450 225426529 -27830054 + MADE1 DNA Mariner 1 78 -2 18005 193 12 17 chr2 225426529 225431451 -27825132 - L1PA15 LINE L1 -384 7219 2319 403 352 41 32 chr2 225432255 225432599 -27823984 - L1PA15 LINE L1 -7228 353 7 197 398 9 18 chr2 225432640 225432753 -27823830 - L2 LINE L2 -6 3266 3155 23 86 0 0 chr2 225432776 225432834 -27823749 + AT_rich Low_complexity Low_complexity 1 58 0 3171 168 6 4 chr2 225433460 225433978 -27822605 - MLT2B1 LTR ERVL 0 520 2 831 266 70 82 chr2 225434053 225434565 -27822018 + L1ME LINE L1 315 820 -5552 800 280 76 33 chr2 225434702 225435846 -27820737 + L1ME LINE L1 781 2103 -4460 229 125 0 0 chr2 225435846 225435886 -27820697 - MADE1 DNA Mariner 0 80 41 23 54 0 0 chr2 225438609 225438646 -27817937 + AT_rich Low_complexity Low_complexity 1 37 0 434 324 18 12 chr2 225439180 225439350 -27817233 + L2 LINE L2 2944 3114 -199 299 257 40 0 chr2 225439351 225439425 -27817158 - MLT1I LTR MaLR -5 404 328 430 231 111 9 chr2 225439553 225439661 -27816922 - MLT1I LTR MaLR -239 170 52 635 207 133 27 chr2 225439686 225439874 -27816709 + L2 LINE L2 3106 3313 0 519 241 145 52 chr2 225439918 225440059 -27816524 - MER102b DNA MER1_type -1102 326 199 2202 100 3 7 chr2 225440059 225440360 -27816223 - AluSq SINE Alu -13 300 1 519 241 145 52 chr2 225440360 225440467 -27816116 - MER102b DNA MER1_type -1229 199 55 301 287 97 17 chr2 225442365 225442602 -27813981 + L1ME3A LINE L1 840 1095 -5024 615 229 56 49 chr2 225442605 225442928 -27813655 + L1MA10 LINE L1 5840 6327 -5 377 290 212 12 chr2 225442955 225443210 -27813373 + L1ME3A LINE L1 3138 3443 -2686 988 112 0 8 chr2 225443229 225443363 -27813220 + AluSq/x SINE Alu 3 135 -178 2197 129 3 0 chr2 225443363 225443672 -27812911 + AluSx SINE Alu 1 310 -2 1535 200 85 47 chr2 225443697 225444146 -27812437 + MLT1C LTR MaLR 1 466 -1 2294 93 10 0 chr2 225444324 225444634 -27811949 + AluSq SINE Alu 1 313 0 1969 136 31 0 chr2 225444713 225445000 -27811583 + AluSx SINE Alu 1 296 -16 369 301 45 58 chr2 225445036 225445418 -27811165 + L1ME3A LINE L1 3734 4110 -2019 515 258 127 56 chr2 225445478 225445691 -27810892 + L2 LINE L2 3075 3302 -11 331 294 44 56 chr2 225445706 225445886 -27810697 + L1ME3A LINE L1 5768 5945 -208 24 0 0 0 chr2 225446032 225446056 -27810527 + AT_rich Low_complexity Low_complexity 1 24 0 2298 133 3 3 chr2 225446056 225446417 -27810166 - L1PB3 LINE L1 -1 6153 5793 351 0 0 0 chr2 225446418 225446457 -27810126 + (TG)n Simple_repeat Simple_repeat 2 40 0 259 318 29 0 chr2 225446461 225446634 -27809949 + (TA)n Simple_repeat Simple_repeat 2 179 0 1281 105 5 34 chr2 225446726 225446935 -27809648 - L1PB3 LINE L1 -377 5777 5575 1181 46 13 7 chr2 225447516 225447669 -27808914 - AluY SINE Alu -10 301 148 807 41 0 0 chr2 225447669 225447766 -27808817 + AluY SINE Alu 5 101 -210 866 140 6 17 chr2 225448001 225448179 -27808404 + GA-rich Low_complexity Low_complexity 3 178 0 958 166 19 33 chr2 225449685 225449896 -27806687 + MER3 DNA MER1_type 1 208 -1 217 228 33 98 chr2 225450029 225450121 -27806462 - MIR SINE MIR -67 195 110 1919 178 122 32 chr2 225451525 225452135 -27804448 - MER39 LTR ERV1 0 707 2 264 59 0 0 chr2 225452406 225452440 -27804143 + (GA)n Simple_repeat Simple_repeat 1 34 0 1553 168 7 25 chr2 225452615 225452901 -27803682 - AluJo SINE Alu -22 290 10 453 285 97 50 chr2 225452946 225453286 -27803297 - L1ME3A LINE L1 -256 5914 5559 697 317 149 8 chr2 225453295 225453872 -27802711 + L2 LINE L2 2646 3299 -14 466 226 32 0 chr2 225453995 225454088 -27802495 + L2 LINE L2 3160 3255 -17 213 39 0 0 chr2 225454090 225454116 -27802467 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 261 255 92 31 chr2 225454358 225454456 -27802127 + MER5B DNA MER1_type 2 105 -73 23 68 0 0 chr2 225455557 225455601 -27800982 + AT_rich Low_complexity Low_complexity 1 44 0 2131 206 119 12 chr2 225456271 225456850 -27799733 + MLT1E1 LTR MaLR 8 648 -6 282 282 78 19 chr2 225456865 225456968 -27799615 + L2 LINE L2 3162 3270 -2 203 310 43 52 chr2 225457990 225458106 -27798477 - MIR SINE MIR -32 230 116 239 309 199 25 chr2 225458117 225458318 -27798265 + MIR SINE MIR 17 252 -10 235 333 31 0 chr2 225458321 225458417 -27798166 - MIR SINE MIR -80 128 30 261 304 58 0 chr2 225458719 225458857 -27797726 + L1ME4a LINE L1 5965 6110 -11 2324 106 0 0 chr2 225459932 225460234 -27796349 + AluSx SINE Alu 1 302 -10 267 31 0 0 chr2 225461029 225461061 -27795522 + (TG)n Simple_repeat Simple_repeat 1 32 0 24 0 0 0 chr2 225462313 225462337 -27794246 + AT_rich Low_complexity Low_complexity 1 24 0 1385 95 25 5 chr2 225462337 225462537 -27794046 + AluY SINE Alu 98 301 -10 201 191 106 21 chr2 225467422 225467469 -27789114 + MIR SINE MIR 58 108 -100 776 182 39 7 chr2 225467854 225468008 -27788575 - MER5A DNA MER1_type -1 188 30 1756 180 7 3 chr2 225468408 225468708 -27787875 + AluJo SINE Alu 1 301 -11 2807 248 60 30 chr2 225468765 225470870 -27785713 + L1ME LINE L1 732 2890 -3190 967 175 0 85 chr2 225471016 225471239 -27785344 - MER20 DNA MER1_type 0 219 16 387 286 119 22 chr2 225471357 225471374 -27785209 - L1ME LINE L1 -432 5689 5675 278 25 0 25 chr2 225471374 225471414 -27785169 + (TG)n Simple_repeat Simple_repeat 1 39 0 387 286 119 22 chr2 225471414 225472083 -27784500 - L1ME LINE L1 -446 5675 4911 278 325 102 21 chr2 225472139 225472837 -27783746 - L1ME LINE L1 -1329 4817 4064 22 0 0 0 chr2 225472849 225472871 -27783712 + AT_rich Low_complexity Low_complexity 1 22 0 246 32 0 0 chr2 225473125 225473156 -27783427 + (TC)n Simple_repeat Simple_repeat 2 32 0 1679 176 14 21 chr2 225473159 225473443 -27783140 - AluJo SINE Alu -30 282 1 360 232 111 40 chr2 225473631 225473730 -27782853 - MER5B DNA MER1_type -3 175 70 216 0 0 0 chr2 225474256 225474280 -27782303 + (A)n Simple_repeat Simple_repeat 1 24 0 375 78 0 0 chr2 225474472 225474523 -27782060 + (TG)n Simple_repeat Simple_repeat 2 52 0 2621 145 4 4 chr2 225475122 225475578 -27781005 + L1MA7 LINE L1 5328 5783 -508 1486 92 40 40 chr2 225475556 225475829 -27780754 + L1MA3 LINE L1 6033 6305 0 * 2224 161 37 39 chr2 225475859 225476376 -27780207 + L1MA7 LINE L1 5769 6284 -7 26 0 0 0 chr2 225476376 225476402 -27780181 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr2 225476432 225476454 -27780129 + AT_rich Low_complexity Low_complexity 1 22 0 215 273 0 0 chr2 225476493 225476537 -27780046 - MIR SINE MIR -83 125 82 1473 91 26 13 chr2 225476899 225477129 -27779454 + L1PA11 LINE L1 5940 6172 -2 379 289 47 31 chr2 225478798 225478926 -27777657 - L2 LINE L2 0 3313 3184 226 269 0 19 chr2 225479034 225479086 -27777497 - L2 LINE L2 -12 3301 3251 2088 113 0 3 chr2 225479252 225479620 -27776963 + AluSg SINE Alu 1 367 0 290 312 9 37 chr2 225479820 225479929 -27776654 - L2 LINE L2 -5 3308 3203 2006 211 121 12 chr2 225480828 225481407 -27775176 - LTR48B LTR ERV1 -2 642 1 449 272 167 0 chr2 225482946 225483108 -27773475 + MIR SINE MIR 73 261 -1 2128 94 50 7 chr2 225483192 225483490 -27773093 - AluSq SINE Alu -2 311 1 800 197 56 11 chr2 225483494 225483672 -27772911 - MER20 DNA MER1_type -4 215 30 363 174 22 11 chr2 225483889 225483981 -27772602 + GA-rich Low_complexity Low_complexity 2 94 0 180 0 0 0 chr2 225484980 225485000 -27771583 + (TC)n Simple_repeat Simple_repeat 1 20 0 1057 144 0 0 chr2 225485000 225485153 -27771430 - AluSg/x SINE Alu -15 295 143 303 71 0 0 chr2 225485313 225485355 -27771228 + (TG)n Simple_repeat Simple_repeat 1 42 0 1627 194 23 3 chr2 225485585 225485889 -27770694 - AluJb SINE Alu -2 310 1 617 164 0 0 chr2 225485889 225485993 -27770590 - AluJo SINE Alu -177 135 32 943 276 101 34 chr2 225486734 225487209 -27769374 - MLT1J LTR MaLR 0 511 5 2100 97 28 3 chr2 225487566 225487855 -27768728 - AluSg SINE Alu -14 296 1 1327 185 4 0 chr2 225488024 225488273 -27768310 + L1MB5 LINE L1 5925 6174 0 313 289 24 43 chr2 225489439 225489553 -27767030 - MIR SINE MIR -84 124 3 525 339 139 53 chr2 225489573 225490362 -27766221 - L2 LINE L2 -195 3077 2226 204 40 0 0 chr2 225490386 225490411 -27766172 + (A)n Simple_repeat Simple_repeat 1 25 0 252 315 31 23 chr2 225490423 225490553 -27766030 - L2 LINE L2 -499 2815 2685 3762 143 103 25 chr2 225490922 225491731 -27764852 + L1MA7 LINE L1 5417 6288 -3 1813 124 77 0 chr2 225491744 225492018 -27764565 + AluSx SINE Alu 1 295 -17 23 0 0 0 chr2 225493252 225493275 -27763308 + AT_rich Low_complexity Low_complexity 1 23 0 1900 88 36 0 chr2 225493942 225494191 -27762392 - AluSc SINE Alu -15 294 37 237 197 0 0 chr2 225494513 225494574 -27762009 + CT-rich Low_complexity Low_complexity 2 62 0 498 276 102 17 chr2 225494746 225495108 -27761475 - L1MEd LINE L1 -3432 2697 2305 1252 236 87 15 chr2 225495131 225495466 -27761117 - MLT1F LTR MaLR 0 542 184 1961 169 3 0 chr2 225495568 225495870 -27760713 - AluJb SINE Alu -9 303 1 292 287 54 0 chr2 225495949 225496078 -27760505 - L1MEd LINE L1 -3862 2267 2132 349 362 126 3 chr2 225496338 225496672 -27759911 - L1MEd LINE L1 -5423 696 322 664 273 9 66 chr2 225496905 225497239 -27759344 + L1MDb LINE L1 794 1108 -5301 453 250 151 12 chr2 225497561 225497733 -27758850 - MLT1L LTR MaLR 0 615 420 2559 55 0 6 chr2 225497926 225498238 -27758345 + AluY SINE Alu 1 310 -1 383 202 0 67 chr2 225498323 225498427 -27758156 - LTR33 LTR ERVL 0 521 425 2293 75 3 0 chr2 225498428 225498720 -27757863 + AluSc SINE Alu 1 293 -16 897 185 98 0 chr2 225498864 225499048 -27757535 - MER58B DNA MER1_type 0 341 140 659 133 0 9 chr2 225499049 225499154 -27757429 + AluSg/x SINE Alu 198 301 -8 279 277 128 0 chr2 225499162 225499256 -27757327 - MER58B DNA MER1_type -234 107 2 588 278 158 13 chr2 225499265 225499499 -27757084 - LTR33 LTR ERVL -253 268 1 1798 176 19 7 chr2 225500083 225500390 -27756193 + AluJb SINE Alu 1 311 -1 2207 129 0 0 chr2 225500698 225501000 -27755583 - AluSx SINE Alu 0 312 11 310 228 152 0 chr2 225501044 225501136 -27755447 + L2 LINE L2 3208 3313 0 1689 162 14 58 chr2 225502272 225502636 -27753947 - MLT1B LTR MaLR -11 379 32 183 208 38 57 chr2 225502801 225502854 -27753729 - L2 LINE L2 0 3313 3262 198 0 0 0 chr2 225503719 225503741 -27752842 + (CA)n Simple_repeat Simple_repeat 2 23 0 907 215 0 0 chr2 225504874 225505046 -27751537 + FRAM SINE Alu 1 172 -4 1327 225 53 3 chr2 225505046 225505331 -27751252 - MLT1A1 LTR MaLR -66 299 1 210 71 0 0 chr2 225505597 225505625 -27750958 + (T)n Simple_repeat Simple_repeat 1 28 0 22 0 0 0 chr2 225505643 225505665 -27750918 + AT_rich Low_complexity Low_complexity 1 22 0 338 271 0 31 chr2 225506305 225506401 -27750182 + MIR SINE MIR 170 262 0 363 23 0 0 chr2 225506646 225506690 -27749893 + (CA)n Simple_repeat Simple_repeat 2 45 0 1490 160 0 13 chr2 225507654 225507892 -27748691 - AluJb SINE Alu -8 304 70 625 283 57 22 chr2 225508916 225509146 -27747437 + MIR SINE MIR 25 262 0 320 238 12 12 chr2 225509980 225510060 -27746523 + GA-rich Low_complexity Low_complexity 3 82 0 2352 101 0 7 chr2 225511619 225511925 -27744658 + AluSx SINE Alu 4 307 -5 413 267 101 5 chr2 225512310 225512476 -27744107 - MIR SINE MIR -60 202 18 303 71 0 0 chr2 225512950 225512992 -27743591 + (CA)n Simple_repeat Simple_repeat 2 43 0 1926 107 38 0 chr2 225517360 225517621 -27738962 + AluSp SINE Alu 1 271 -42 225 30 0 61 chr2 225517621 225517654 -27738929 - L1P3 LINE L1 -423 5749 5719 225 0 0 0 chr2 225517654 225517679 -27738904 + (TG)n Simple_repeat Simple_repeat 2 26 0 * 247 24 0 48 chr2 225517678 225517720 -27738863 + (TA)n Simple_repeat Simple_repeat 1 40 0 1101 242 50 3 chr2 225518420 225518717 -27737866 + MER113 DNA MER1_type? 144 454 -67 311 347 126 12 chr2 225518798 225518965 -27737618 + MER5A DNA MER1_type 1 186 -3 365 307 101 41 chr2 225519158 225519376 -27737207 + L1ME LINE L1 5360 5590 -531 713 141 25 8 chr2 225519455 225519576 -27737007 + L1MB4 LINE L1 6053 6175 -5 2238 106 3 3 chr2 225519637 225519948 -27736635 + AluSp SINE Alu 1 311 -2 931 134 20 0 chr2 225520229 225520378 -27736205 - MER30 DNA MER1_type -78 152 1 189 74 0 0 chr2 225520392 225520419 -27736164 + (A)n Simple_repeat Simple_repeat 1 27 0 5326 131 23 5 chr2 225520453 225521283 -27735300 - L1PB1 LINE L1 0 6151 5307 1949 192 80 36 chr2 225521283 225521758 -27734825 - MLT1D LTR MaLR -9 496 1 195 162 0 0 chr2 225521764 225521801 -27734782 + A-rich Low_complexity Low_complexity 1 37 0 471 152 9 19 chr2 225521811 225521916 -27734667 + GA-rich Low_complexity Low_complexity 1 104 0 238 191 43 0 chr2 225521963 225522010 -27734573 - MLT1H1 LTR MaLR -500 55 7 913 163 119 79 chr2 225522867 225523069 -27733514 - MER63A DNA MER1_type 0 210 1 324 308 103 13 chr2 225523169 225523393 -27733190 + L2 LINE L2 2997 3240 -73 261 313 45 62 chr2 225524175 225524351 -27732232 - L2 LINE L2 -201 3071 2899 1607 165 55 0 chr2 225524803 225525058 -27731525 + AluSx SINE Alu 14 282 -30 324 70 0 0 chr2 225525061 225525104 -27731479 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 230 183 0 2 chr2 225525732 225525984 -27730599 + AluJo SINE Alu 1 301 -1 717 333 45 43 chr2 225526656 225527353 -27729230 + L1MEd LINE L1 48 745 -5374 812 216 6 11 chr2 225527415 225527591 -27728992 - FRAM SINE Alu 0 40 1 549 286 30 81 chr2 225527592 225527924 -27728659 + L1MEd LINE L1 786 1100 -5019 369 152 106 0 chr2 225527930 225527996 -27728587 - MER39B LTR ERV1 -2 651 579 25 0 0 0 chr2 225527996 225528021 -27728562 + AT_rich Low_complexity Low_complexity 1 25 0 285 57 0 0 chr2 225528021 225528056 -27728527 - U7 snRNA snRNA -27 36 2 * 309 125 89 0 chr2 225528053 225528121 -27728462 - LTR49 LTR ERV1 -56 539 475 454 200 152 40 chr2 225528332 225528457 -27728126 + L2 LINE L2 3152 3290 -23 769 271 156 24 chr2 225528687 225529137 -27727446 - L2 LINE L2 -1 3312 2804 622 289 85 33 chr2 225529219 225529489 -27727094 + LTR16A LTR ERVL 56 339 -111 1454 186 62 4 chr2 225529638 225529913 -27726670 + AluJo SINE Alu 1 291 -21 209 56 0 28 chr2 225529930 225529966 -27726617 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 666 311 14 25 chr2 225529979 225530256 -27726327 - LTR24B-int LTR ERV1 -4849 274 1 831 105 57 0 chr2 225530256 225530380 -27726203 - LTR24B LTR ERV1 -7 569 439 720 282 78 55 chr2 225530390 225530555 -27726028 - L1MC4a LINE L1 -915 6893 6716 2253 84 3 20 chr2 225530555 225530852 -27725731 - AluSx SINE Alu -1 311 20 720 282 78 55 chr2 225530852 225530995 -27725588 - L1MC4a LINE L1 -1092 6716 6578 180 0 0 0 chr2 225531147 225531167 -27725416 + (TG)n Simple_repeat Simple_repeat 2 21 0 4070 86 2 0 chr2 225531167 225531808 -27724775 - L1P5 LINE L1 -369 5782 5141 692 131 7 117 chr2 225532113 225532250 -27724333 + MER47A DNA MER2_type 2 123 -243 441 273 117 54 chr2 225532536 225532854 -27723729 + LTR33A LTR ERVL 88 439 -84 2482 135 80 10 chr2 225532854 225533253 -27723330 + MSTA LTR MaLR 1 427 -1 441 273 117 54 chr2 225533253 225533344 -27723239 + LTR33A LTR ERVL 439 523 0 377 185 54 123 chr2 225534180 225534330 -27722253 + MER5B DNA MER1_type 19 162 -16 377 263 30 0 chr2 225535009 225535108 -27721475 - Charlie7 DNA MER1_type -2510 102 1 230 294 43 22 chr2 225535767 225535859 -27720724 - MIR SINE MIR -92 116 23 333 311 29 0 chr2 225536480 225536583 -27720000 - MIR SINE MIR -61 147 42 258 108 0 0 chr2 225536700 225536737 -27719846 + LTR24B-int LTR ERV1 6554 6590 -8 673 70 20 20 chr2 225536750 225536850 -27719733 + LTR24B LTR ERV1 4 103 -473 936 134 7 7 chr2 225536856 225536998 -27719585 - FLAM_C SINE Alu -1 142 1 3067 128 23 17 chr2 225537004 225537479 -27719104 + LTR24B LTR ERV1 93 570 -6 202 250 0 0 chr2 225537767 225537811 -27718772 - L2 LINE L2 0 3272 3229 383 326 61 7 chr2 225539288 225539435 -27717148 + MIR SINE MIR 66 220 -42 253 200 15 46 chr2 225540092 225540157 -27716426 - L2 LINE L2 -552 2762 2700 996 112 53 7 chr2 225540170 225540322 -27716261 + AluSg/x SINE Alu 133 291 -19 893 271 130 12 chr2 225540334 225540673 -27715910 - L2 LINE L2 -639 2675 2297 230 116 23 0 chr2 225540991 225541034 -27715549 + CT-rich Low_complexity Low_complexity 2 45 0 1628 174 45 3 chr2 225541191 225541478 -27715105 + MSTB LTR MaLR 1 299 -127 11330 93 1 1 chr2 225541578 225543063 -27713520 - L1P3 LINE L1 -4974 1487 2 207 0 0 0 chr2 225544193 225544216 -27712367 + (CAAAA)n Simple_repeat Simple_repeat 1 23 0 30 0 0 0 chr2 225546252 225546282 -27710301 + AT_rich Low_complexity Low_complexity 1 30 0 1314 284 74 48 chr2 225547787 225548748 -27707835 + L1MC4a LINE L1 4877 5310 -836 1595 162 30 40 chr2 225548846 225549149 -27707434 + AluSx SINE Alu 1 300 -12 305 301 61 61 chr2 225549852 225550065 -27706518 + PABL_B-int LTR ERV1 4065 4215 -3177 456 277 50 76 chr2 225550678 225551021 -27705562 + PABL_B-int LTR ERV1 2145 2478 -2169 348 302 84 78 chr2 225551652 225552116 -27704467 + PABL_B-int LTR ERV1 5633 6099 -1023 879 320 41 41 chr2 225552166 225552653 -27703930 + PABL_B-int LTR ERV1 6199 6685 -437 877 216 0 25 chr2 225554216 225554378 -27702205 - FRAM SINE Alu -18 158 1 1483 270 41 24 chr2 225555032 225555443 -27701140 - MLT1E LTR MaLR 0 593 176 1073 221 138 73 chr2 225555468 225555924 -27700659 + MLT2B1 LTR ERVL 1 413 -1 445 229 56 42 chr2 225555925 225556069 -27700514 - MLT1F1 LTR MaLR -406 161 15 2053 119 0 0 chr2 225556191 225556469 -27700114 - AluSg SINE Alu -32 278 1 315 260 71 40 chr2 225556469 225556597 -27699986 - LTR48B LTR ERV1 -396 311 1 2438 141 115 7 chr2 225557359 225557778 -27698805 + MER31B LTR ERV1 3 466 0 673 238 45 100 chr2 225559056 225559346 -27697237 + LTR33 LTR ERVL 1 274 -247 790 129 16 8 chr2 225559455 225559579 -27697004 + MSTA LTR MaLR 304 428 0 448 244 17 0 chr2 225559980 225560099 -27696484 + HsTC2 DNA Tc2 1780 1900 0 2285 107 0 0 chr2 225560177 225560475 -27696108 + AluY SINE Alu 1 298 -13 331 306 27 54 chr2 225560581 225560613 -27695970 - L2 LINE L2 -4 3309 3278 2643 158 12 28 chr2 225560613 225561043 -27695540 + MSTB LTR MaLR 2 424 -2 331 306 27 54 chr2 225561043 225561157 -27695426 - L2 LINE L2 -35 3278 3167 404 248 27 40 chr2 225562975 225563124 -27693459 + Charlie8 DNA MER1_type 35 181 -2236 1658 259 40 86 chr2 225564303 225564751 -27691832 - MER21B LTR ERV1 -149 714 312 1971 125 3 24 chr2 225564751 225565047 -27691536 - AluJo SINE Alu -22 290 1 1658 259 40 86 chr2 225565047 225565342 -27691241 - MER21B LTR ERV1 -551 312 5 28677 101 8 2 chr2 225565830 225569950 -27686633 - L1P LINE L1 -765 5381 1239 247 285 89 54 chr2 225570242 225570415 -27686168 + MIR3 SINE MIR 11 189 -63 222 37 0 0 chr2 225570942 225570969 -27685614 + (TC)n Simple_repeat Simple_repeat 2 28 0 1760 176 10 7 chr2 225571016 225571312 -27685271 - AluJo SINE Alu -11 301 5 2504 76 3 0 chr2 225573268 225573571 -27683012 - AluSp SINE Alu -9 304 1 1638 162 33 0 chr2 225573580 225573852 -27682731 - THE1B LTR MaLR -83 281 1 438 221 227 29 chr2 225574665 225574837 -27681746 + MLT1K LTR MaLR 18 223 -365 186 362 53 43 chr2 225574838 225574932 -27681651 + L2 LINE L2 3137 3231 -41 237 163 0 0 chr2 225575330 225575379 -27681204 + (TTA)n Simple_repeat Simple_repeat 2 50 0 25 51 0 0 chr2 225575537 225575576 -27681007 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr2 225575637 225575659 -27680924 + AT_rich Low_complexity Low_complexity 1 22 0 221 321 0 0 chr2 225576607 225576660 -27679923 + MIR SINE MIR 205 257 -5 296 289 49 42 chr2 225576786 225576928 -27679655 - MIR SINE MIR -56 206 64 486 234 63 93 chr2 225577166 225577371 -27679212 + MLT2B1 LTR ERVL 322 520 0 3285 194 62 13 chr2 225577373 225578048 -27678535 + MLT1-int LTR MaLR 4 711 -660 408 156 0 0 chr2 225578037 225578101 -27678482 + MLT1-int LTR MaLR 824 887 -484 * 267 170 0 19 chr2 225578169 225578222 -27678361 + MLT-int LTR MaLR 679 730 -1005 975 152 30 173 chr2 225578499 225578736 -27677847 + MLT1A2 LTR MaLR 173 374 0 412 248 34 8 chr2 225578736 225578853 -27677730 + MIR SINE MIR 73 192 -70 315 0 0 0 chr2 225579190 225579225 -27677358 + (CA)n Simple_repeat Simple_repeat 2 36 0 348 81 0 81 chr2 225580251 225580313 -27676270 - Alu SINE Alu 0 301 245 21 0 0 0 chr2 225582124 225582145 -27674438 + AT_rich Low_complexity Low_complexity 1 21 0 362 260 0 0 chr2 225583175 225583248 -27673335 - MER116 DNA Mariner -7 73 1 26 30 0 0 chr2 225584205 225584238 -27672345 + AT_rich Low_complexity Low_complexity 1 33 0 523 307 12 0 chr2 225584824 225584987 -27671596 + MER103 DNA DNA 1 165 -1 190 361 0 49 chr2 225585195 225585339 -27671244 - L2 LINE L2 -291 2981 2845 400 298 40 33 chr2 225585365 225585516 -27671067 - MIR SINE MIR -62 200 49 229 370 47 55 chr2 225585808 225586065 -27670518 - L2 LINE L2 -611 2703 2449 228 280 72 64 chr2 225586403 225586528 -27670055 + MIR3 SINE MIR 81 206 -2 552 292 112 29 chr2 225587738 225588015 -27668568 - LTR16C LTR ERVL -189 302 3 232 242 20 71 chr2 225588472 225588571 -27668012 + L1MC4a LINE L1 5843 5936 -1872 254 275 0 22 chr2 225588577 225588668 -27667915 + (TAGA)n Simple_repeat Simple_repeat 2 90 0 21 0 0 0 chr2 225588797 225588818 -27667765 + AT_rich Low_complexity Low_complexity 1 21 0 198 277 21 0 chr2 225590907 225590954 -27665629 + L2 LINE L2 3217 3264 -8 21 82 0 0 chr2 225591385 225591434 -27665149 + AT_rich Low_complexity Low_complexity 1 49 0 801 274 27 27 chr2 225591651 225591874 -27664709 - MIR SINE MIR -21 241 19 2121 117 3 3 chr2 225592844 225593144 -27663439 + AluSc SINE Alu 1 300 -9 180 0 0 0 chr2 225593281 225593301 -27663282 + (TCCA)n Simple_repeat Simple_repeat 3 22 0 311 194 54 43 chr2 225593309 225593402 -27663181 - L2 LINE L2 0 3272 3179 210 162 0 0 chr2 225593596 225593633 -27662950 + A-rich Low_complexity Low_complexity 1 37 0 997 204 5 10 chr2 225593979 225594180 -27662403 - MLT1G LTR MaLR -381 209 10 21 0 0 0 chr2 225594197 225594218 -27662365 + AT_rich Low_complexity Low_complexity 1 21 0 418 241 154 36 chr2 225594220 225594440 -27662143 + MLT1J LTR MaLR 266 511 0 390 21 0 0 chr2 225594955 225595002 -27661581 + (CA)n Simple_repeat Simple_repeat 2 48 0 399 41 0 0 chr2 225596112 225596161 -27660422 + (TG)n Simple_repeat Simple_repeat 1 49 0 1782 170 0 20 chr2 225597516 225597810 -27658773 + AluJo SINE Alu 1 288 -24 1727 134 52 4 chr2 225598250 225598539 -27658044 + AluSx SINE Alu 3 304 0 330 298 137 12 chr2 225599207 225599319 -27657264 - MIR SINE MIR -54 208 67 2073 128 0 10 chr2 225599319 225599615 -27656968 + AluSx SINE Alu 13 305 -7 330 298 137 12 chr2 225599615 225599670 -27656913 - MIR SINE MIR -195 67 20 4915 199 100 24 chr2 225599973 225600620 -27655963 + L1MB8 LINE L1 23 780 -6079 2054 101 0 0 chr2 225600620 225600887 -27655696 + AluY SINE Alu 6 272 -39 4915 199 100 24 chr2 225600887 225601280 -27655303 + L1MB8 LINE L1 780 1142 -5717 1515 244 11 20 chr2 225601286 225601733 -27654850 + L1MB8 LINE L1 2921 3363 -3594 1156 130 26 16 chr2 225601735 225601927 -27654656 - Tigger7 DNA MER2_type -3 2484 2291 * 3386 166 63 21 chr2 225601923 225602113 -27654470 - Tigger7 DNA MER2_type -88 645 464 2202 99 0 3 chr2 225602113 225602422 -27654161 - AluSg SINE Alu 0 308 1 3386 166 63 21 chr2 225602422 225602849 -27653734 - Tigger7 DNA MER2_type -269 464 1 544 248 14 0 chr2 225602850 225602995 -27653588 + L1MB8 LINE L1 3389 3535 -3422 1897 144 0 0 chr2 225602996 225603281 -27653302 + MER49 LTR ERV1 1 285 -638 1377 204 16 44 chr2 225603289 225603446 -27653137 + MER4D LTR ERV1 594 739 -164 2224 126 47 16 chr2 225603446 225603810 -27652773 + THE1C LTR MaLR 1 375 0 1377 204 16 44 chr2 225603810 225603971 -27652612 + MER4D LTR ERV1 739 903 0 3149 223 62 15 chr2 225603971 225604770 -27651813 + L1MB8 LINE L1 3533 4384 -2573 1312 128 221 12 chr2 225604770 225605019 -27651564 + AluSg1 SINE Alu 1 301 -8 3149 223 62 15 chr2 225605019 225605152 -27651431 + L1MB8 LINE L1 4384 4509 -2448 5495 194 39 26 chr2 225605152 225607182 -27649401 + L1MB8 LINE L1 4931 6984 -5 823 248 40 5 chr2 225607309 225607547 -27649036 + MIR SINE MIR 5 247 -15 2007 114 0 4 chr2 225607557 225607838 -27648745 + AluY SINE Alu 28 307 -4 436 242 24 24 chr2 225608411 225608535 -27648048 + MLT1K LTR MaLR 180 303 -285 450 388 0 7 chr2 225608890 225609042 -27647541 + L2 LINE L2 3122 3272 0 2395 65 34 0 chr2 225609181 225609474 -27647109 + AluY SINE Alu 1 303 -8 549 149 11 21 chr2 225659832 225659926 -27596657 - THE1C LTR MaLR -282 93 1 1109 237 7 22 chr2 225660263 225660537 -27596046 - AluJo SINE Alu -13 299 30 1194 66 0 7 chr2 225660752 225660904 -27595679 + AluY SINE Alu 140 290 -21 2414 86 0 3 chr2 225660913 225661214 -27595369 + AluSg SINE Alu 1 300 -10 815 158 8 8 chr2 225661545 225661678 -27594905 + AluSq/x SINE Alu 2 134 -179 1604 98 219 0 chr2 225661750 225661996 -27594587 + AluSg1 SINE Alu 1 300 -9 329 284 86 17 chr2 225662592 225662708 -27593875 - MER5A DNA MER1_type -50 139 16 263 248 121 121 chr2 225664561 225664767 -27591816 + MIR SINE MIR 43 248 -14 424 288 32 0 chr2 225664774 225664899 -27591684 - MIR SINE MIR -108 154 26 996 201 31 26 chr2 225665921 225666150 -27590433 + MIR SINE MIR 2 231 -31 1843 142 14 24 chr2 225666197 225666306 -27590277 + AluSx SINE Alu 5 114 -198 486 0 0 0 chr2 225666306 225666360 -27590223 + (CTA)n Simple_repeat Simple_repeat 1 54 0 1843 142 14 24 chr2 225666360 225666545 -27590038 + AluSx SINE Alu 114 296 -16 2291 104 0 3 chr2 225666548 225666847 -27589736 + AluSx SINE Alu 1 298 -14 2328 112 133 16 chr2 225668066 225668262 -27588321 + MSTA LTR MaLR 1 173 -255 306 50 0 0 chr2 225668262 225668302 -27588281 + (TC)n Simple_repeat Simple_repeat 1 40 0 2328 112 133 16 chr2 225668302 225668488 -27588095 + MSTA LTR MaLR 173 428 0 2372 128 15 23 chr2 225669124 225669514 -27587069 - L1MA9 LINE L1 -245 6067 5681 915 222 41 27 chr2 225669523 225669744 -27586839 + L1MA9 LINE L1 6067 6290 -22 254 297 36 69 chr2 225669940 225670216 -27586367 - HAL1 LINE L1 -1 2506 2240 234 91 0 0 chr2 225670231 225670264 -27586319 + (TC)n Simple_repeat Simple_repeat 1 33 0 252 284 69 29 chr2 225670338 225670440 -27586143 - MLT1L LTR MaLR -509 106 1 453 248 9 18 chr2 225670577 225670686 -27585897 + MER5B DNA MER1_type 9 116 -62 358 312 83 46 chr2 225670723 225671072 -27585511 + MLT1K LTR MaLR 203 564 -24 351 0 0 0 chr2 225671716 225671755 -27584828 + (CA)n Simple_repeat Simple_repeat 2 40 0 193 369 12 12 chr2 225671802 225671886 -27584697 - MIR SINE MIR -151 111 28 2253 103 3 0 chr2 225671972 225672273 -27584310 - AluSq SINE Alu -11 302 1 483 302 172 37 chr2 225673040 225673523 -27583060 + L3 LINE CR1 407 954 -623 305 240 0 0 chr2 225673530 225673605 -27582978 + MIR SINE MIR 178 252 -10 270 116 0 0 chr2 225673609 225673652 -27582931 + (CCTA)n Simple_repeat Simple_repeat 1 43 0 2047 145 0 3 chr2 225673797 225674100 -27582483 - AluJb SINE Alu 0 312 11 565 169 105 8 chr2 225674185 225674309 -27582274 - MIR SINE MIR -90 172 37 4003 29 0 0 chr2 225675093 225675537 -27581046 + L1PA4 LINE L1 5709 6152 -3 279 0 0 0 chr2 225675540 225675571 -27581012 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 221 160 298 21 chr2 225676144 225676238 -27580345 - MIR SINE MIR -19 243 124 347 284 16 47 chr2 225677061 225677188 -27579395 + L2 LINE L2 2976 3098 -174 2376 85 0 0 chr2 225677232 225677525 -27579058 - AluY SINE Alu -18 293 1 2437 84 3 0 chr2 225677824 225678134 -27578449 + AluY SINE Alu 1 311 0 2215 111 0 3 chr2 225678699 225678997 -27577586 - AluSx SINE Alu -15 297 1 1552 149 40 55 chr2 225679997 225680124 -27576459 + MER33 DNA MER1_type 1 128 -2457 1904 157 27 0 chr2 225680124 225680417 -27576166 + AluJb SINE Alu 1 301 -11 1552 149 40 55 chr2 225680417 225680448 -27576135 + MER33 DNA MER1_type 128 158 -2427 1615 133 108 25 chr2 225680448 225680734 -27575849 + AluJb SINE Alu 1 310 -2 1552 149 40 55 chr2 225680734 225680903 -27575680 + MER33 DNA MER1_type 158 324 0 1916 157 7 0 chr2 225681472 225681787 -27574796 + AluSx SINE Alu 1 312 0 426 276 105 33 chr2 225681794 225682098 -27574485 + L1ME4a LINE L1 5321 5646 -475 489 76 0 0 chr2 225682098 225682164 -27574419 + (TAGA)n Simple_repeat Simple_repeat 1 66 0 358 193 157 57 chr2 225682173 225682313 -27574270 + L1ME4a LINE L1 5968 6121 0 2417 95 0 0 chr2 225683865 225684169 -27572414 - AluSg SINE Alu -5 305 2 613 216 18 0 chr2 225684998 225685109 -27571474 - MER58A DNA MER1_type 0 126 14 344 256 88 51 chr2 225685383 225685520 -27571063 - MIR3 SINE MIR -58 150 9 1997 147 0 10 chr2 225686031 225686324 -27570259 - AluJo SINE Alu -21 291 2 1690 231 138 2 chr2 225686654 225687061 -27569522 - LTR40b LTR ERVL 0 462 1 1970 167 15 47 chr2 225687295 225687696 -27568887 + MLT1B LTR MaLR 3 390 0 205 250 177 42 chr2 225687873 225687969 -27568614 + MIR SINE MIR 35 143 -65 3717 62 0 19 chr2 225688119 225688589 -27567994 + L1PA8 LINE L1 5711 6171 -1 1760 144 98 0 chr2 225689629 225689906 -27566677 + AluSx SINE Alu 1 304 -8 648 166 83 21 chr2 225689912 225690057 -27566526 + L1MA10 LINE L1 6180 6333 -1 369 58 0 0 chr2 225692070 225692122 -27564461 + (CA)n Simple_repeat Simple_repeat 2 53 0 258 32 0 0 chr2 225692121 225692152 -27564431 + (TC)n Simple_repeat Simple_repeat 1 31 0 * 33 43 0 0 chr2 225692258 225692305 -27564278 + AT_rich Low_complexity Low_complexity 1 47 0 2094 97 0 69 chr2 225693072 225693391 -27563192 + AluSx SINE Alu 1 297 -15 197 371 0 0 chr2 225693856 225693918 -27562665 + MIR SINE MIR 197 258 -4 17565 68 0 1 chr2 225693919 225696188 -27560395 + L1P LINE L1 1759 4025 -2121 2393 70 3 0 chr2 225696450 225696783 -27559800 + AluSp SINE Alu 1 334 0 201 108 0 0 chr2 225697231 225697268 -27559315 + (A)n Simple_repeat Simple_repeat 1 37 0 965 129 0 96 chr2 225697917 225698095 -27558488 + AluSg/x SINE Alu 135 295 -15 564 168 0 0 chr2 225698095 225698220 -27558363 + GA-rich Low_complexity Low_complexity 1 125 0 3575 157 35 68 chr2 225698225 225698944 -27557639 + L1MB3 LINE L1 5488 6182 -1 254 345 18 27 chr2 225699082 225699192 -27557391 - MIR SINE MIR -152 110 2 2222 118 0 28 chr2 225699307 225699629 -27556954 + AluSp SINE Alu 1 313 0 202 347 166 15 chr2 225700003 225700202 -27556381 + MIR SINE MIR 24 252 -10 2432 103 48 31 chr2 225701246 225701604 -27554979 - THE1B LTR MaLR 0 364 1 804 220 12 6 chr2 225701640 225701813 -27554770 + FRAM SINE Alu 1 173 -3 549 235 205 6 chr2 225702260 225702426 -27554157 + MIR SINE MIR 31 229 -33 613 203 51 159 chr2 225703474 225703769 -27552814 + MER102b DNA MER1_type 79 341 0 2339 128 61 0 chr2 225703812 225704155 -27552428 + THE1B LTR MaLR 1 364 0 497 285 57 24 chr2 225704236 225704482 -27552101 + L1MC4a LINE L1 5679 5932 -1876 2139 123 0 3 chr2 225704517 225704809 -27551774 - AluSg SINE Alu -18 292 2 2150 94 0 75 chr2 225704868 225705199 -27551384 + AluSq SINE Alu 5 310 -3 32850 105 10 58 chr2 225705367 225711833 -27544750 + L1PA7 LINE L1 11 6153 -1 362 173 13 0 chr2 225711838 225711913 -27544670 + GA-rich Low_complexity Low_complexity 6 81 0 231 36 0 0 chr2 225712142 225712170 -27544413 + (GA)n Simple_repeat Simple_repeat 1 28 0 2036 134 0 33 chr2 225714040 225714346 -27542237 - AluSx SINE Alu -16 296 1 341 300 151 26 chr2 225714741 225715091 -27541492 - L2 LINE L2 0 3313 2920 2347 104 0 0 chr2 225715288 225715613 -27540970 + AluSq SINE Alu 1 325 0 262 291 58 39 chr2 225716039 225716142 -27540441 - L2 LINE L2 -1 3312 3208 252 278 7 90 chr2 225717848 225717992 -27538591 + L2 LINE L2 3134 3265 -7 291 196 39 0 chr2 225718243 225718396 -27538187 + CT-rich Low_complexity Low_complexity 1 159 0 521 235 16 15 chr2 225719994 225720256 -27536327 + CT-rich Low_complexity Low_complexity 1 262 0 284 200 15 0 chr2 225720350 225720415 -27536168 - AluSp/q SINE Alu -3 300 235 1530 253 171 23 chr2 225720720 225721708 -27534875 + L2 LINE L2 2131 3269 -44 784 128 0 0 chr2 225721710 225721835 -27534748 + AluSg/x SINE Alu 188 312 0 310 128 0 0 chr2 225721841 225721888 -27534695 + L2 LINE L2 3264 3310 -3 655 304 75 12 chr2 225722009 225722328 -27534255 - L2 LINE L2 -111 3202 2864 618 250 157 27 chr2 225722364 225722696 -27533887 + L1ME3A LINE L1 5717 6091 -79 2117 122 6 10 chr2 225722703 225723014 -27533569 - AluSx SINE Alu -2 310 1 23 54 0 0 chr2 225723085 225723122 -27533461 + AT_rich Low_complexity Low_complexity 1 37 0 360 268 81 24 chr2 225724320 225724417 -27532166 + MIR SINE MIR 56 163 -99 2272 217 101 42 chr2 225724417 225724664 -27531919 - MER82 DNA MER2_type 0 653 422 2147 124 0 0 chr2 225724664 225724990 -27531593 - AluSx SINE Alu 0 326 1 2272 217 101 42 chr2 225724990 225725358 -27531225 - MER82 DNA MER2_type -231 422 1 360 268 81 24 chr2 225725358 225725383 -27531200 + MIR SINE MIR 163 185 -77 1560 201 153 14 chr2 225726253 225726607 -27529976 + MER82 DNA MER2_type 1 403 -250 285 132 0 0 chr2 225726626 225726664 -27529919 + Alu SINE Alu 1 38 -264 1649 73 5 5 chr2 225726888 225727093 -27529490 - AluSq SINE Alu -108 205 1 1297 215 71 75 chr2 225727208 225727606 -27528977 + MLT1C LTR MaLR 1 398 -69 2726 39 0 0 chr2 225727606 225727913 -27528670 - AluY SINE Alu -3 308 2 1297 215 71 75 chr2 225727913 225727980 -27528603 + MLT1C LTR MaLR 398 464 -3 411 120 66 7 chr2 225728056 225728071 -27528512 + L1MB7 LINE L1 6050 6063 -121 2337 70 7 3 chr2 225728071 225728369 -27528214 + AluY SINE Alu 1 299 -12 411 120 66 7 chr2 225728369 225728438 -27528145 + L1MB7 LINE L1 6063 6141 -43 848 230 43 9 chr2 225728653 225728883 -27527700 - MIR SINE MIR -2 260 23 23 0 0 0 chr2 225731173 225731196 -27525387 + AT_rich Low_complexity Low_complexity 1 23 0 1254 271 41 70 chr2 225731253 225731623 -27524960 - L1MC4a LINE L1 -1785 6023 5675 2428 67 0 3 chr2 225731623 225731921 -27524662 + AluSc SINE Alu 1 297 -12 1254 271 41 70 chr2 225731921 225732136 -27524447 - L1MC4a LINE L1 -2133 5675 5455 552 263 66 35 chr2 225732136 225732364 -27524219 - L2 LINE L2 -6 3307 3073 381 238 0 0 chr2 225732364 225732465 -27524118 + (TG)n Simple_repeat Simple_repeat 2 102 0 1167 277 71 33 chr2 225732467 225733171 -27523412 - L2 LINE L2 -223 3090 2358 339 297 31 23 chr2 225733755 225733883 -27522700 + MIR SINE MIR 64 192 -70 237 294 22 0 chr2 225734464 225734556 -27522027 - L1MC/D LINE L1 -1924 5884 5791 2283 86 0 40 chr2 225735125 225735427 -27521156 + AluSx SINE Alu 3 292 -20 377 187 55 30 chr2 225735560 225735710 -27520873 + L2 LINE L2 3190 3308 -5 2397 71 3 7 chr2 225736762 225737059 -27519524 - AluY SINE Alu -15 296 1 839 290 162 26 chr2 225737439 225737946 -27518637 - MLT1K LTR MaLR -2 586 11 239 343 21 29 chr2 225738250 225738390 -27518193 + MER5A DNA MER1_type 1 139 -50 1063 161 0 6 chr2 225738414 225738576 -27518007 - AluSx SINE Alu -24 286 126 493 77 0 0 chr2 225738577 225738642 -27517941 - AluSx SINE Alu -247 65 1 650 237 70 13 chr2 225738694 225738850 -27517733 - MER96 DNA MER1_type? -1 174 10 1927 133 0 43 chr2 225739210 225739512 -27517071 + AluSq SINE Alu 1 289 -24 2006 130 0 0 chr2 225740944 225741220 -27515363 - AluSx SINE Alu -36 276 1 1044 150 0 0 chr2 225741507 225741654 -27514929 + AluSq/x SINE Alu 1 147 -166 435 100 0 0 chr2 225741654 225741714 -27514869 + Alu SINE Alu 235 294 -18 2198 109 0 30 chr2 225741844 225742147 -27514436 + AluSx SINE Alu 1 294 -18 667 82 37 30 chr2 225742147 225742281 -27514302 + GA-rich Low_complexity Low_complexity 1 135 0 803 256 42 27 chr2 225742650 225743026 -27513557 - LTR16A LTR ERVL -3 447 26 1590 187 41 75 chr2 225743263 225743606 -27512977 + L1MB5 LINE L1 5783 6136 -38 243 0 0 0 chr2 225743606 225743633 -27512950 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1869 134 18 0 chr2 225743636 225743913 -27512670 - AluJb SINE Alu -30 282 1 1590 187 41 75 chr2 225743913 225743953 -27512630 + L1MB5 LINE L1 6138 6167 -7 2106 137 0 3 chr2 225744664 225744957 -27511626 + AluSx SINE Alu 3 294 -18 2470 54 0 41 chr2 225745486 225745801 -27510782 + AluY SINE Alu 1 302 -9 318 99 14 56 chr2 225746087 225746158 -27510425 + L1MB4 LINE L1 6113 6180 0 2291 88 3 0 chr2 225746450 225746735 -27509848 + AluSc SINE Alu 1 286 -23 647 235 54 0 chr2 225747561 225747727 -27508856 + MIR SINE MIR 28 202 -60 22 0 0 0 chr2 225747960 225747982 -27508601 + AT_rich Low_complexity Low_complexity 1 22 0 36 0 0 0 chr2 225748045 225748081 -27508502 + AT_rich Low_complexity Low_complexity 1 36 0 633 199 0 82 chr2 225749261 225749407 -27507176 - AluYb8 SINE Alu -8 310 177 243 146 49 0 chr2 225750534 225750575 -27506008 - Alu SINE Alu -258 43 1 2296 97 0 3 chr2 225750770 225751069 -27505514 + AluSg SINE Alu 1 298 -12 2257 116 3 0 chr2 225751095 225751405 -27505178 + AluSp SINE Alu 1 311 -2 560 224 48 104 chr2 225752257 225752378 -27504205 - MER112 DNA MER1_type -3 253 154 2374 112 0 0 chr2 225752378 225752691 -27503892 + AluSq SINE Alu 1 313 0 560 224 48 104 chr2 225752691 225752837 -27503746 - MER112 DNA MER1_type -102 154 1 829 244 73 70 chr2 225753043 225753428 -27503155 + L1MC4 LINE L1 5555 5940 -1868 623 275 80 78 chr2 225753584 225754009 -27502574 + MLT1K LTR MaLR 21 446 -142 553 234 91 11 chr2 225754034 225754209 -27502374 - MER5A DNA MER1_type 0 189 1 241 265 0 0 chr2 225754549 225754617 -27501966 - MER53 DNA DNA 0 189 122 2467 205 174 13 chr2 225755035 225755707 -27500876 - L1MB7 LINE L1 -10 6174 5395 1595 202 75 8 chr2 225755703 225756089 -27500494 - L1MB7 LINE L1 -1343 4803 4392 * 1081 279 159 43 chr2 225756208 225756319 -27500264 + L1MC4 LINE L1 6684 6781 -1261 1655 189 0 16 chr2 225756319 225756625 -27499958 + AluJo SINE Alu 1 301 -11 1081 279 159 43 chr2 225756625 225756950 -27499633 + L1MC4 LINE L1 6781 7067 -975 1596 139 21 78 chr2 225756950 225757281 -27499302 + AluJo SINE Alu 1 312 0 1081 279 159 43 chr2 225757281 225757897 -27498686 + L1MC4 LINE L1 7067 7610 -432 189 74 0 0 chr2 225757897 225757924 -27498659 + (TG)n Simple_repeat Simple_repeat 1 27 0 1081 279 159 43 chr2 225757924 225757992 -27498591 + L1MC4 LINE L1 7610 7669 -373 2179 110 24 0 chr2 225757992 225758284 -27498299 - AluSx SINE Alu -12 300 2 1081 279 159 43 chr2 225758284 225758376 -27498207 + L1MC4 LINE L1 7669 8040 -2 1861 122 148 0 chr2 225758673 225758976 -27497607 + MER7A DNA MER2_type 1 346 0 239 373 23 9 chr2 225759038 225759255 -27497328 - L1MC4a LINE L1 -1874 5934 5715 2353 100 0 3 chr2 225759277 225759577 -27497006 + AluSc SINE Alu 1 299 -10 2101 101 19 44 chr2 225759647 225759964 -27496619 - AluSx SINE Alu -3 309 1 1700 260 67 7 chr2 225760128 225760589 -27495994 + MLT1J LTR MaLR 7 495 -16 349 289 94 0 chr2 225760981 225761130 -27495453 - L1MC4a LINE L1 -420 5701 5539 2133 133 3 0 chr2 225761782 225762082 -27494501 + AluSx SINE Alu 1 301 -11 314 248 86 19 chr2 225762125 225762230 -27494353 + LTR16A1 LTR ERVL 346 457 0 837 175 19 31 chr2 225762631 225762791 -27493792 - FRAM SINE Alu -8 158 1 2525 224 90 62 chr2 225762804 225763490 -27493093 + L1MEc LINE L1 2 667 -5729 1882 89 0 0 chr2 225763490 225763725 -27492858 - AluSc SINE Alu -5 304 70 2525 224 90 62 chr2 225763725 225763886 -27492697 + L1MEc LINE L1 667 881 -5515 2337 99 3 0 chr2 225763886 225764188 -27492395 + AluSg SINE Alu 1 303 -7 2525 224 90 62 chr2 225764188 225764231 -27492352 + L1MEc LINE L1 881 921 -5475 1141 237 60 16 chr2 225764214 225764581 -27492002 + L1MEc LINE L1 1414 1796 -4600 * 974 170 29 68 chr2 225764588 225764794 -27491789 - AluJb SINE Alu -21 291 94 528 182 64 102 chr2 225764795 225764982 -27491601 + L1MEc LINE L1 1789 1968 -4428 3821 195 67 18 chr2 225764983 225765595 -27490988 + Tigger6a DNA MER2_type 2 583 -1014 2258 110 7 3 chr2 225765595 225765896 -27490687 + AluSg SINE Alu 1 302 -8 3821 195 67 18 chr2 225765896 225766113 -27490470 + Tigger6a DNA MER2_type 583 877 -720 1481 130 65 22 chr2 225766113 225766390 -27490193 - L1MA7 LINE L1 0 6291 6003 3821 195 67 18 chr2 225766390 225766429 -27490154 + Tigger6a DNA MER2_type 877 913 -170 3939 71 2 18 chr2 225766430 225766938 -27489645 - LTR3b LTR ERVK 0 500 1 253 182 0 0 chr2 225766952 225766996 -27489587 - HERVK14 LTR ERVK -61 5884 5841 * 2462 148 31 63 chr2 225766995 225767693 -27488890 - HERVK14 LTR ERVK -378 5567 1988 720 177 23 8 chr2 225767821 225767951 -27488632 + Tigger6a DNA MER2_type 951 1082 -1 322 150 21 0 chr2 225767977 225768037 -27488546 - FAM SINE Alu -16 163 109 3683 109 58 5 chr2 225768334 225768903 -27487680 - L1PB4 LINE L1 -1 6155 5557 2228 133 11 117 chr2 225769199 225769873 -27486710 + Tigger3(Golem) DNA MER2_type 1 3029 0 1695 167 50 7 chr2 225770102 225770401 -27486182 + AluSx SINE Alu 1 312 0 639 121 0 0 chr2 225770401 225770500 -27486083 + (GGAA)n Simple_repeat Simple_repeat 3 101 0 388 216 52 45 chr2 225770812 225770939 -27485644 + L1ME4a LINE L1 5733 5860 -261 1410 200 51 0 chr2 225770939 225771234 -27485349 + AluJo SINE Alu 1 310 -2 388 216 52 45 chr2 225771234 225771339 -27485244 + L1ME4a LINE L1 5860 5963 -158 1048 153 0 12 chr2 225772128 225772291 -27484292 - AluSg/x SINE Alu -8 302 142 230 247 135 0 chr2 225772325 225772414 -27484169 + L1ME LINE L1 5676 5776 -345 2052 138 0 0 chr2 225772459 225772749 -27483834 + AluSx SINE Alu 3 292 -20 2405 90 0 3 chr2 225772758 225773059 -27483524 + AluSg SINE Alu 1 300 -10 768 158 8 8 chr2 225773390 225773523 -27483060 + AluSq/x SINE Alu 2 134 -179 1595 98 219 0 chr2 225773595 225773841 -27482742 + AluSg1 SINE Alu 1 300 -9 23 68 0 0 chr2 225774384 225774428 -27482155 + AT_rich Low_complexity Low_complexity 1 44 0 2126 115 21 0 chr2 225774604 225774892 -27481691 - AluSx SINE Alu -16 296 3 559 253 192 38 chr2 225774936 225775379 -27481204 - L1ME LINE L1 -345 5776 5266 591 200 7 37 chr2 225775388 225775523 -27481060 + FLAM_C SINE Alu 1 131 -2 36 0 0 0 chr2 225776380 225776416 -27480167 + GC_rich Low_complexity Low_complexity 1 36 0 276 308 67 50 chr2 225779037 225779378 -27477205 - L2 LINE L2 -101 3212 2866 1115 142 0 6 chr2 225779496 225779672 -27476911 - AluSg/x SINE Alu -1 311 137 273 59 0 0 chr2 225779713 225779747 -27476836 + Alu SINE Alu 11 44 -258 1171 120 77 11 chr2 225779747 225779930 -27476653 + AluSg/x SINE Alu 99 293 -17 293 307 46 20 chr2 225779936 225780089 -27476494 - L2 LINE L2 -614 2700 2544 2393 93 3 3 chr2 225780107 225780419 -27476164 + AluSp SINE Alu 1 312 -1 2243 109 7 0 chr2 225780588 225780881 -27475702 - AluSx SINE Alu -17 295 1 630 306 125 4 chr2 225782101 225782333 -27474250 + MIR SINE MIR 3 262 0 2072 136 3 0 chr2 225782400 225782694 -27473889 + AluSx SINE Alu 6 300 -12 2457 45 0 17 chr2 225782696 225783006 -27473577 + AluY SINE Alu 1 305 0 187 292 28 14 chr2 225783007 225783073 -27473510 + L2 LINE L2 3237 3304 -4 816 160 0 0 chr2 225783073 225783198 -27473385 + FLAM_A SINE Alu 1 125 -8 200 274 0 20 chr2 225783312 225783363 -27473220 + CT-rich Low_complexity Low_complexity 4 53 0 2201 112 13 16 chr2 225783959 225784272 -27472311 - AluSx SINE Alu 0 312 1 235 309 57 0 chr2 225784373 225784496 -27472087 + MIR SINE MIR 127 256 -6 210 171 0 0 chr2 225784528 225784569 -27472014 + (TG)n Simple_repeat Simple_repeat 2 42 0 953 197 236 0 chr2 225784852 225785085 -27471498 + MLT1F LTR MaLR 179 466 -76 477 215 8 16 chr2 225785218 225785339 -27471244 + MLT1F LTR MaLR 421 540 -2 1629 166 89 46 chr2 225785663 225785803 -27470780 + MLT1A1 LTR MaLR 1 134 -231 2287 101 27 0 chr2 225785803 225786099 -27470484 + AluSg SINE Alu 1 304 -6 1629 166 89 46 chr2 225786099 225786308 -27470275 + MLT1A1 LTR MaLR 134 365 0 24 53 0 0 chr2 225786863 225786901 -27469682 + AT_rich Low_complexity Low_complexity 1 38 0 466 127 0 0 chr2 225786903 225786966 -27469617 - AluS SINE Alu -247 64 2 321 197 0 0 chr2 225787545 225787621 -27468962 + (TA)n Simple_repeat Simple_repeat 2 77 0 306 0 0 0 chr2 225787645 225787679 -27468904 + (TG)n Simple_repeat Simple_repeat 2 35 0 1117 184 72 88 chr2 225788931 225789318 -27467265 + L1MC5 LINE L1 7124 7504 -457 2075 120 62 0 chr2 225789611 225789903 -27466680 - AluSx SINE Alu -2 310 1 2124 128 0 0 chr2 225790881 225791171 -27465412 - AluSx SINE Alu -13 299 10 1625 137 0 119 chr2 225791769 225792097 -27464486 + AluSx SINE Alu 1 289 -23 977 315 64 30 chr2 225792184 225793023 -27463560 - L2 LINE L2 -73 3240 2371 251 333 121 45 chr2 225793041 225793173 -27463410 + MER115 DNA AcHobo 18 159 -534 480 92 46 23 chr2 225793217 225793348 -27463235 + (TG)n Simple_repeat Simple_repeat 1 134 0 206 167 52 21 chr2 225793384 225793480 -27463103 + (TG)n Simple_repeat Simple_repeat 1 99 0 442 127 65 24 chr2 225793541 225793840 -27462743 + (TG)n Simple_repeat Simple_repeat 1 311 0 194 191 24 24 chr2 225793861 225793945 -27462638 + (TG)n Simple_repeat Simple_repeat 1 84 0 1352 258 70 40 chr2 225795508 225795981 -27460602 - MLT1J LTR MaLR 0 511 25 1999 90 4 19 chr2 225795981 225796278 -27460305 - AluSx SINE Alu 0 313 21 348 83 0 0 chr2 225796367 225796415 -27460168 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 22 35 0 0 chr2 225797139 225797168 -27459415 + AT_rich Low_complexity Low_complexity 1 29 0 2086 100 54 4 chr2 225798230 225798509 -27458074 - AluSq SINE Alu -20 293 1 26 30 0 0 chr2 225798701 225798734 -27457849 + AT_rich Low_complexity Low_complexity 1 33 0 309 138 103 17 chr2 225798802 225798860 -27457723 - MLT1A2 LTR MaLR 0 595 533 906 180 0 0 chr2 225798861 225799011 -27457572 + AluJb SINE Alu 148 297 -15 310 271 166 28 chr2 225799035 225799216 -27457367 - MLT1A2 LTR MaLR -62 533 328 939 194 48 141 chr2 225799259 225799657 -27456926 - MLT1A2 LTR MaLR -13 361 1 339 260 115 50 chr2 225799657 225799894 -27456689 - MLT1E LTR MaLR -275 280 31 334 221 0 26 chr2 225800416 225800529 -27456054 + GA-rich Low_complexity Low_complexity 1 110 0 2030 96 10 43 chr2 225800642 225800943 -27455640 + AluSx SINE Alu 1 291 -21 2337 90 10 0 chr2 225801463 225801764 -27454819 + AluSp SINE Alu 1 304 -9 1690 142 10 35 chr2 225801851 225802139 -27454444 + AluJo SINE Alu 1 281 -31 298 266 0 47 chr2 225803365 225803493 -27453090 + A-rich Low_complexity Low_complexity 1 122 0 208 270 0 52 chr2 225804181 225804296 -27452287 + CT-rich Low_complexity Low_complexity 3 111 0 540 264 164 5 chr2 225804458 225804659 -27451924 - MIR SINE MIR -2 260 28 510 298 141 56 chr2 225805498 225805733 -27450850 - L3 LINE CR1 -66 1511 1297 1861 163 7 7 chr2 225805733 225806034 -27450549 + AluJo SINE Alu 1 301 -11 510 298 141 56 chr2 225806034 225806245 -27450338 - L3 LINE CR1 -280 1297 1027 444 284 56 19 chr2 225806248 225806410 -27450173 - MIR3 SINE MIR -7 201 34 199 340 43 21 chr2 225806570 225806664 -27449919 - L3 LINE CR1 -680 897 802 406 282 0 40 chr2 225807860 225807984 -27448599 + MIR SINE MIR 2 120 -142 1023 229 59 98 chr2 225807987 225808547 -27448036 - MLT1F1 LTR MaLR -4 563 1 526 211 32 0 chr2 225808547 225808670 -27447913 + MIR SINE MIR 115 241 -21 339 269 130 0 chr2 225808970 225809078 -27447505 + MER50 LTR ERV1 1 122 -612 1140 245 121 68 chr2 225809079 225809707 -27446876 + MER50 LTR ERV1 26 686 -48 443 277 117 24 chr2 225810503 225810752 -27445831 - L1ME3 LINE L1 -279 5883 5612 1533 171 23 39 chr2 225812655 225812965 -27443618 - AluJo SINE Alu -7 305 1 190 361 0 0 chr2 225813790 225813862 -27442721 - L2 LINE L2 -8 3264 3193 204 338 50 0 chr2 225814323 225814403 -27442180 - L3b LINE CR1 -202 1381 1298 30 0 0 0 chr2 225815055 225815085 -27441498 + AT_rich Low_complexity Low_complexity 1 30 0 607 252 8 0 chr2 225815096 225815215 -27441368 - AluJo/FRAM SINE Alu -64 248 129 2248 113 0 0 chr2 225815217 225815527 -27441056 - AluSx SINE Alu -1 311 2 905 179 33 146 chr2 225815844 225816179 -27440404 - MLT1A1 LTR MaLR -49 316 20 277 275 68 68 chr2 225816215 225816422 -27440161 + MLT1K LTR MaLR 378 584 -4 254 363 0 0 chr2 225816435 225816526 -27440057 - MIR SINE MIR -120 142 52 2241 128 0 0 chr2 225818016 225818314 -27438269 + AluSx SINE Alu 1 298 -14 751 177 144 11 chr2 225818473 225818654 -27437929 - MER3 DNA MER1_type -4 205 1 1168 122 0 0 chr2 225818749 225818905 -27437678 - AluSg/x SINE Alu -22 288 133 2359 103 6 0 chr2 225819677 225819988 -27436595 - AluSp SINE Alu 0 313 1 1892 159 40 0 chr2 225821462 225821758 -27434825 + AluSx SINE Alu 1 308 -4 241 380 42 0 chr2 225823039 225823110 -27433473 + MIR SINE MIR 21 94 -168 516 310 35 17 chr2 225823264 225823438 -27433145 - MIR SINE MIR -62 200 24 219 295 74 68 chr2 225823458 225823648 -27432935 - L2 LINE L2 -494 2820 2630 2189 109 0 10 chr2 225824174 225824468 -27432115 - AluY SINE Alu -20 291 1 21 57 0 0 chr2 225824816 225824851 -27431732 + AT_rich Low_complexity Low_complexity 1 35 0 213 191 0 0 chr2 225825629 225825671 -27430912 - MIR SINE MIR -121 141 100 789 336 87 35 chr2 225826228 225826663 -27429920 + L2 LINE L2 2804 3261 -11 706 194 8 0 chr2 225827829 225827958 -27428625 - FLAM_A SINE Alu -3 139 10 461 300 113 70 chr2 225828265 225828665 -27427918 + L3 LINE CR1 1101 1517 -60 2185 102 0 28 chr2 225828906 225829228 -27427355 - AluSq SINE Alu 0 313 1 342 261 119 46 chr2 225829304 225829522 -27427061 + L2 LINE L2 3079 3312 -1 1922 124 0 4 chr2 225830033 225830299 -27426284 + AluSx SINE Alu 30 294 -18 2535 80 3 0 chr2 225830563 225830875 -27425708 + AluSp SINE Alu 1 313 0 213 343 145 16 chr2 225830989 225831362 -27425221 - L2 LINE L2 -1257 2057 1637 394 259 245 0 chr2 225831773 225831916 -27424667 - MER5A DNA MER1_type 0 189 12 21 57 0 0 chr2 225831938 225831973 -27424610 + AT_rich Low_complexity Low_complexity 1 35 0 570 119 12 0 chr2 225833649 225833733 -27422850 - AluJo SINE Alu -19 293 209 2450 60 17 37 chr2 225833736 225834089 -27422494 - THE1A LTR MaLR 0 355 10 1190 213 0 5 chr2 225834093 225834300 -27422283 - AluJo SINE Alu -106 206 1 191 366 104 0 chr2 225835441 225835575 -27421008 - MIR3 SINE MIR -3 205 58 183 80 0 0 chr2 225836024 225836049 -27420534 + (TTTTC)n Simple_repeat Simple_repeat 5 29 0 990 182 40 20 chr2 225836089 225836250 -27420333 - AluJo SINE Alu -48 264 97 2031 148 0 3 chr2 225836250 225836553 -27420030 + AluSx SINE Alu 1 302 -10 990 182 40 20 chr2 225836553 225836589 -27419994 - AluJo SINE Alu -215 97 63 21 71 0 0 chr2 225836843 225836885 -27419698 + AT_rich Low_complexity Low_complexity 1 42 0 1497 166 231 3 chr2 225837387 225837725 -27418858 - MER47B DNA MER2_type -3 415 1 2382 67 3 26 chr2 225838181 225838493 -27418090 - AluY SINE Alu -6 305 1 202 331 105 35 chr2 225838559 225838731 -27417852 - L2 LINE L2 -197 3116 2933 443 337 115 42 chr2 225838927 225839625 -27416958 - L2 LINE L2 -726 2588 1840 715 309 70 65 chr2 225841346 225841871 -27414712 - L2 LINE L2 -1 3312 2784 281 274 29 0 chr2 225841912 225842014 -27414569 - L2 LINE L2 -667 2647 2543 1245 188 29 0 chr2 225844877 225845117 -27411466 - Tigger3(Golem) DNA MER2_type -5 3024 2778 1748 117 7 33 chr2 225845123 225845396 -27411187 + AluSx SINE Alu 41 306 -6 808 197 0 0 chr2 225845397 225845539 -27411044 - Tigger3(Golem) DNA MER2_type -2887 142 1 663 256 45 78 chr2 225845967 225846209 -27410374 + MIR SINE MIR 12 245 -17 1715 156 42 50 chr2 225846291 225846636 -27409947 - THE1C LTR MaLR 0 375 32 1998 134 10 16 chr2 225846636 225846942 -27409641 + AluSx SINE Alu 1 304 -8 1715 156 42 50 chr2 225846942 225846974 -27409609 - THE1C LTR MaLR -343 32 1 919 128 97 88 chr2 225847119 225847345 -27409238 - AluJo SINE Alu 0 312 85 336 326 133 48 chr2 225847380 225847840 -27408743 + L2 LINE L2 1599 2097 -1217 670 347 9 4 chr2 225848023 225848248 -27408335 - MIR SINE MIR -30 232 7 187 368 53 0 chr2 225848576 225848671 -27407912 + MIR SINE MIR 7 106 -156 520 300 45 6 chr2 225848713 225848912 -27407671 + MIR SINE MIR 39 244 -18 368 332 99 30 chr2 225848940 225849142 -27407441 + L2 LINE L2 2566 2781 -533 1451 118 4 53 chr2 225849511 225849739 -27406844 + AluJo SINE Alu 87 303 -9 357 287 92 38 chr2 225849748 225850041 -27406542 + L1MC/D LINE L1 5254 5562 -741 2442 84 0 0 chr2 225851701 225852012 -27404571 - AluY SINE Alu 0 311 1 223 313 0 16 chr2 225852147 225852211 -27404372 + L2 LINE L2 3210 3272 0 322 270 0 0 chr2 225852850 225852913 -27403670 - MIR SINE MIR -115 93 31 24 0 0 0 chr2 225853353 225853377 -27403206 + AT_rich Low_complexity Low_complexity 1 24 0 590 158 103 0 chr2 225853467 225853613 -27402970 + L1MA8 LINE L1 6112 6272 -19 288 200 0 0 chr2 225854403 225854468 -27402115 + T-rich Low_complexity Low_complexity 1 65 0 37 0 0 0 chr2 225855145 225855182 -27401401 + AT_rich Low_complexity Low_complexity 1 37 0 1363 193 104 7 chr2 225855206 225855475 -27401108 - AluJo SINE Alu -17 295 1 2231 100 33 0 chr2 225856871 225857172 -27399411 - AluSp SINE Alu -2 311 1 881 217 0 0 chr2 225857620 225857781 -27398802 - FRAM SINE Alu -18 158 1 1648 127 109 11 chr2 225857788 225858055 -27398528 - AluSx SINE Alu -8 304 12 244 289 13 0 chr2 225859534 225859610 -27396973 - MIR SINE MIR -105 157 81 1897 176 0 3 chr2 225860610 225860916 -27395667 - AluJb SINE Alu -7 305 1 24 0 0 0 chr2 225861187 225861211 -27395372 + AT_rich Low_complexity Low_complexity 1 24 0 465 34 0 0 chr2 225862048 225862107 -27394476 + (TG)n Simple_repeat Simple_repeat 1 59 0 514 60 0 48 chr2 225863182 225863266 -27393317 - MER49 LTR ERV1 0 923 844 222 284 34 34 chr2 225863298 225863386 -27393197 - MIR SINE MIR -94 168 81 4192 136 67 26 chr2 225863573 225864256 -27392327 - MER49 LTR ERV1 -89 834 112 2156 90 36 20 chr2 225864256 225864557 -27392026 + AluSc SINE Alu 1 306 -3 4192 136 67 26 chr2 225864557 225864674 -27391909 - MER49 LTR ERV1 -811 112 1 458 216 193 24 chr2 225864977 225865141 -27391442 - THE1C LTR MaLR -186 189 1 374 231 97 9 chr2 225866342 225866502 -27390081 - L1MB7 LINE L1 0 6184 6010 452 246 89 52 chr2 225866528 225866857 -27389726 - LTR38 LTR ERV1 -193 363 46 4080 201 112 19 chr2 225866867 225866949 -27389634 - L1M4 LINE L1 -1432 4714 4641 1990 142 13 7 chr2 225866949 225867258 -27389325 - AluSx SINE Alu -1 311 1 4080 201 112 19 chr2 225867258 225868094 -27388489 - L1M4 LINE L1 -1505 4641 3671 1846 170 117 14 chr2 225868094 225868452 -27388131 + MSTD LTR MaLR 2 396 0 4080 201 112 19 chr2 225868452 225868646 -27387937 - L1M4 LINE L1 -2475 3671 3497 255 369 0 6 chr2 225869689 225869846 -27386737 + (CCA)n Simple_repeat Simple_repeat 1 156 0 2390 242 93 13 chr2 225870583 225870611 -27385972 - L1M4 LINE L1 -2636 3510 3486 2252 110 0 0 chr2 225870611 225870910 -27385673 - AluSx SINE Alu -13 299 1 2390 242 93 13 chr2 225870910 225871750 -27384833 - L1M4 LINE L1 -2660 3486 2572 1337 249 172 30 chr2 225873463 225873510 -27383073 - L2 LINE L2 -129 3184 3145 1757 200 93 32 chr2 225873510 225873950 -27382633 - MLT1C LTR MaLR 0 467 1 1337 249 172 30 chr2 225873950 225874620 -27381963 - L2 LINE L2 -168 3145 2356 587 211 28 0 chr2 225874669 225874811 -27381772 - L2 LINE L2 -1712 1602 1457 2070 134 0 3 chr2 225874834 225875125 -27381458 + AluSx SINE Alu 1 290 -22 2265 103 3 3 chr2 225875303 225875603 -27380980 - AluSp SINE Alu -13 300 1 21 0 0 0 chr2 225877369 225877390 -27379193 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 225877998 225878022 -27378561 + AT_rich Low_complexity Low_complexity 1 24 0 360 0 0 0 chr2 225878523 225878563 -27378020 + (TG)n Simple_repeat Simple_repeat 1 40 0 2026 117 7 21 chr2 225878978 225879269 -27377314 - AluSx SINE Alu -25 287 1 227 293 98 0 chr2 225879431 225879513 -27377070 + LTR33A LTR ERVL 62 151 -372 527 245 58 27 chr2 225879609 225879797 -27376786 + LTR33A LTR ERVL 330 523 0 815 126 0 0 chr2 225880152 225880271 -27376312 - AluSx SINE Alu 0 312 194 1105 99 0 0 chr2 225880272 225880413 -27376170 - AluSx SINE Alu -172 141 1 495 0 0 0 chr2 225881955 225882010 -27374573 + (TG)n Simple_repeat Simple_repeat 2 56 0 324 0 0 0 chr2 225882251 225882287 -27374296 + (CA)n Simple_repeat Simple_repeat 2 37 0 525 80 0 0 chr2 225882287 225882362 -27374221 + (TC)n Simple_repeat Simple_repeat 2 76 0 318 353 15 7 chr2 225882793 225882929 -27373654 + L2 LINE L2 3160 3296 -17 663 232 67 87 chr2 225885789 225885867 -27370716 + L1MC5 LINE L1 7478 7556 -405 2447 77 3 0 chr2 225885867 225886177 -27370406 - AluSq SINE Alu -2 311 1 663 232 67 87 chr2 225886177 225886457 -27370126 + L1MC5 LINE L1 7556 7828 -133 2201 116 16 0 chr2 225886457 225886760 -27369823 - AluSq SINE Alu -5 308 1 663 232 67 87 chr2 225886760 225886862 -27369721 + L1MC5 LINE L1 7828 7930 -31 25 95 0 0 chr2 225887219 225887293 -27369290 + AT_rich Low_complexity Low_complexity 1 74 0 272 307 87 98 chr2 225888573 225888616 -27367967 - L2 LINE L2 -2 3270 3228 1009 154 122 5 chr2 225888616 225888804 -27367779 - MER6B DNA MER2_type 0 210 1 272 307 87 98 chr2 225888804 225889024 -27367559 - L2 LINE L2 -44 3228 3010 980 105 0 23 chr2 225889155 225889288 -27367295 + FLAM_C SINE Alu 1 130 -3 217 182 68 0 chr2 225889757 225889801 -27366782 + MER5B DNA MER1_type 1 47 -131 559 111 10 10 chr2 225889803 225889902 -27366681 + (TTTTC)n Simple_repeat Simple_repeat 2 100 0 317 192 77 87 chr2 225889931 225890035 -27366548 - MER5B DNA MER1_type -74 104 2 284 211 232 32 chr2 225890334 225890429 -27366154 - L2 LINE L2 -18 3254 3141 1914 136 48 141 chr2 225890922 225891355 -27365228 - MLT2C1 LTR ERVL -4 393 1 937 88 0 0 chr2 225891810 225891935 -27364648 + AluSp/q SINE Alu 182 306 -7 198 170 0 75 chr2 225892151 225892204 -27364379 - L2 LINE L2 -8 3264 3216 294 105 0 0 chr2 225892853 225892891 -27363692 + tRNA-Asp-GAC tRNA tRNA 1 38 -37 1946 114 11 0 chr2 225893000 225893302 -27363281 - AluSx SINE Alu 0 322 18 216 0 0 0 chr2 225894277 225894301 -27362282 + (T)n Simple_repeat Simple_repeat 1 24 0 239 268 85 49 chr2 225894521 225894603 -27361980 - MIR SINE MIR -89 119 35 1189 205 12 16 chr2 225894989 225895243 -27361340 - L1ME3 LINE L1 -1 6161 5909 770 168 96 6 chr2 225895265 225895432 -27361151 - L1ME3 LINE L1 -347 5815 5634 221 303 33 57 chr2 225895465 225895587 -27360996 - MIR SINE MIR -56 206 88 2020 142 0 0 chr2 225902389 225902684 -27353899 - AluSx SINE Alu -17 295 1 386 210 49 0 chr2 225902926 225903007 -27353576 - MER94 DNA DNA -49 85 1 2159 96 3 3 chr2 225903313 225903605 -27352978 + AluSx SINE Alu 5 296 -16 5016 148 52 22 chr2 225906237 225907124 -27349459 - MER49 LTR ERV1 -10 913 1 1342 220 22 4 chr2 225907124 225907419 -27349164 - MER49-int LTR ERV1 0 7097 6443 909 196 36 31 chr2 225907421 225907615 -27348968 - MER49-int LTR ERV1 -625 6133 5939 696 150 105 26 chr2 225907617 225907883 -27348700 - MER49-int LTR ERV1 -1367 4964 4586 * 1465 147 41 20 chr2 225907871 225908163 -27348420 - MER49-int LTR ERV1 -2577 4021 3724 2379 154 93 34 chr2 225908238 225909156 -27347427 - MER49-int LTR ERV1 -2868 3730 1558 365 157 0 0 chr2 225909157 225909208 -27347375 + Alu SINE Alu 1 51 -250 1377 184 73 4 chr2 225909214 225909494 -27347089 - LOR1-int LTR ERV1 0 7097 6446 6199 131 46 43 chr2 225909521 225910620 -27345963 - LTR57-int LTR ERVL -3958 1385 283 5764 111 37 22 chr2 225911147 225912048 -27344535 - MER49 LTR ERV1 -9 914 1 618 241 121 14 chr2 225912494 225912701 -27343882 + MIR SINE MIR 21 249 -13 782 176 67 0 chr2 225913543 225913708 -27342875 - MLT1C LTR MaLR -291 176 1 2246 135 22 155 chr2 225914197 225914731 -27341852 + LTR32 LTR ERVL 9 471 0 525 293 82 70 chr2 225914926 225915367 -27341216 - L2 LINE L2 -10 3262 2817 519 256 70 26 chr2 225916063 225916219 -27340364 + MER5B DNA MER1_type 12 174 -4 1571 160 4 14 chr2 225916946 225917227 -27339356 + AluJo SINE Alu 11 288 -24 1578 161 120 17 chr2 225917832 225918260 -27338323 + MLT2B2 LTR ERVL 1 515 0 335 206 0 0 chr2 225918508 225918581 -27338002 - L1 LINE L1 -1465 4681 4609 1588 169 0 30 chr2 225918582 225918877 -27337706 + AluJb SINE Alu 22 307 -5 2132 104 0 7 chr2 225919381 225919680 -27336903 - AluSg1 SINE Alu -12 297 1 664 92 50 25 chr2 225919773 225919893 -27336690 - L1MA4A LINE L1 -6 6297 6175 283 70 93 0 chr2 225919894 225919937 -27336646 - L1 LINE L1 -940 5908 5862 585 0 0 0 chr2 225919937 225920002 -27336581 + (TTTC)n Simple_repeat Simple_repeat 4 68 0 16163 167 42 30 chr2 225920065 225920864 -27335719 - L1 LINE L1 -1098 5750 4962 258 56 0 0 chr2 225920864 225920900 -27335683 + (TG)n Simple_repeat Simple_repeat 1 36 0 16163 167 42 30 chr2 225920900 225923021 -27333562 - L1 LINE L1 -1886 4962 2867 1814 152 0 23 chr2 225923021 225923367 -27333216 - AluSx SINE Alu 0 312 1 16163 167 42 30 chr2 225923367 225923991 -27332592 - L1 LINE L1 -3981 2867 2252 2352 72 0 3 chr2 225923991 225924295 -27332288 - AluSg SINE Alu -7 303 1 16163 167 42 30 chr2 225924295 225926429 -27330154 - L1 LINE L1 -4596 2252 3 444 315 80 0 chr2 225926823 225926985 -27329598 - MIR3 SINE MIR -12 196 22 480 265 245 20 chr2 225927611 225927671 -27328912 - MIR SINE MIR 0 262 217 1080 152 104 70 chr2 225927671 225927901 -27328682 + MER8 DNA MER2_type 1 238 -1 480 265 245 20 chr2 225927901 225928044 -27328539 - MIR SINE MIR -45 217 13 2001 116 14 0 chr2 225928533 225928827 -27327756 - AluSx SINE Alu -14 298 1 461 250 16 73 chr2 225928870 225928996 -27327587 - Charlie8 DNA MER1_type -2152 265 152 1688 159 7 27 chr2 225928996 225929291 -27327292 + AluJb SINE Alu 1 289 -23 461 250 16 73 chr2 225929291 225929356 -27327227 - Charlie8 DNA MER1_type -2265 152 85 315 0 0 0 chr2 225929584 225929619 -27326964 + (TG)n Simple_repeat Simple_repeat 2 36 0 1875 120 33 4 chr2 225929619 225929894 -27326689 - AluSg SINE Alu -27 283 1 571 322 61 9 chr2 225930201 225930415 -27326168 + MIR SINE MIR 34 258 -4 1369 164 47 24 chr2 225930547 225930842 -27325741 + MER33 DNA MER1_type 1 286 -38 906 180 0 3 chr2 225930842 225931086 -27325497 + AluJb SINE Alu 1 311 -1 338 130 0 0 chr2 225931108 225931162 -27325421 + MER33 DNA MER1_type 309 362 -1 289 277 0 0 chr2 225931165 225931230 -27325353 + L2 LINE L2 3249 3313 0 988 95 18 36 chr2 225931231 225931338 -27325245 + L1MA5A LINE L1 6129 6233 -64 2289 116 73 14 chr2 225931338 225931682 -27324901 - THE1B LTR MaLR 0 364 1 988 95 18 36 chr2 225931682 225931742 -27324841 + L1MA5A LINE L1 6233 6293 -4 279 305 38 8 chr2 225931910 225932041 -27324542 - MIR SINE MIR -116 146 12 261 0 0 0 chr2 225932475 225932504 -27324079 + (CA)n Simple_repeat Simple_repeat 2 30 0 25 0 0 0 chr2 225933059 225933084 -27323499 + AT_rich Low_complexity Low_complexity 1 25 0 2422 64 0 0 chr2 225933316 225933613 -27322970 + AluY SINE Alu 3 299 -12 189 213 0 0 chr2 225934516 225934563 -27322020 + (TTCA)n Simple_repeat Simple_repeat 4 50 0 1419 275 76 21 chr2 225934994 225935390 -27321193 + LTR16B LTR ERVL 1 425 -39 1844 182 55 11 chr2 225935390 225935769 -27320814 - MSTD LTR MaLR 0 396 1 1419 275 76 21 chr2 225935769 225935808 -27320775 + LTR16B LTR ERVL 425 460 -4 471 353 13 7 chr2 225935936 225936089 -27320494 + L2 LINE L2 3119 3272 0 269 293 45 38 chr2 225936335 225936468 -27320115 - L2 LINE L2 -213 3059 2926 1884 114 4 0 chr2 225936588 225936873 -27319710 - AluSx SINE Alu 0 307 22 2086 118 0 0 chr2 225937784 225938081 -27318502 - AluSx SINE Alu -15 297 1 235 226 0 0 chr2 225938085 225938138 -27318445 - L1ME LINE L1 -297 5824 5772 374 287 88 42 chr2 225938390 225938721 -27317862 - L1ME4a LINE L1 -239 5882 5537 225 283 48 78 chr2 225938728 225938894 -27317689 + MLT1J LTR MaLR 1 161 -350 1943 114 0 62 chr2 225938949 225939274 -27317309 - AluSq SINE Alu -8 305 1 374 333 66 14 chr2 225939345 225939558 -27317025 + MLT1L LTR MaLR 374 597 -18 4583 81 23 5 chr2 225939636 225940293 -27316290 - L1MA3 LINE L1 -10 6295 5627 5077 137 6 10 chr2 225940293 225940848 -27315735 + L1M1 LINE L1 4485 5041 -1264 1943 152 55 22 chr2 225940848 225941211 -27315372 - THE1C LTR MaLR 0 375 1 5077 137 6 10 chr2 225941211 225941843 -27314740 + L1M1 LINE L1 5041 5666 -639 300 259 116 9 chr2 225941935 225942047 -27314536 - MIR SINE MIR -55 207 84 1873 117 0 0 chr2 225942513 225942777 -27313806 + AluSx SINE Alu 12 275 -37 222 37 0 0 chr2 225942782 225942809 -27313774 + (GAAA)n Simple_repeat Simple_repeat 1 27 0 721 300 85 58 chr2 225942983 225943301 -27313282 - MLT1K LTR MaLR -17 571 234 1975 93 27 27 chr2 225943301 225943601 -27312982 - AluY SINE Alu -11 300 1 721 300 85 58 chr2 225943601 225943766 -27312817 - MLT1K LTR MaLR -354 234 75 604 304 12 0 chr2 225945097 225945268 -27311315 + MIR SINE MIR 2 174 -88 32 0 0 0 chr2 225945290 225945322 -27311261 + AT_rich Low_complexity Low_complexity 1 32 0 27 0 0 0 chr2 225946529 225946556 -27310027 + AT_rich Low_complexity Low_complexity 1 27 0 2229 88 0 0 chr2 225946916 225947223 -27309360 + AluSq SINE Alu 1 307 0 779 251 108 0 chr2 225947226 225947429 -27309154 + MIR SINE MIR 37 261 -1 631 248 38 0 chr2 225947839 225947972 -27308611 - L2 LINE L2 -2 3311 3174 2122 125 3 0 chr2 225948148 225948452 -27308131 - AluSx SINE Alu -7 305 1 805 157 8 0 chr2 225948452 225948573 -27308010 - FLAM_A SINE Alu -13 129 8 360 0 0 0 chr2 225950081 225950121 -27306462 + (TG)n Simple_repeat Simple_repeat 2 41 0 1674 277 316 27 chr2 225951813 225952683 -27303900 - L2 LINE L2 -12 3301 2683 1878 171 88 44 chr2 225952683 225953162 -27303421 - MLT1D LTR MaLR -3 502 3 1674 277 316 27 chr2 225953162 225954273 -27302310 - L2 LINE L2 -630 2683 742 643 216 99 18 chr2 225954292 225954514 -27302069 - MER20B DNA MER1_type 0 783 544 509 320 145 25 chr2 225954602 225954725 -27301858 - L2 LINE L2 -2641 673 566 1876 134 0 4 chr2 225954725 225955002 -27301581 + AluSx SINE Alu 6 281 -31 980 138 6 0 chr2 225955002 225955169 -27301414 + (GA)n Simple_repeat Simple_repeat 1 168 0 509 320 145 25 chr2 225955169 225955534 -27301049 - L2 LINE L2 -2747 567 125 1826 135 21 0 chr2 225957072 225957360 -27299223 - AluJb SINE Alu -18 294 1 661 265 18 18 chr2 225957363 225957529 -27299054 - MER5A DNA MER1_type -7 182 17 516 225 107 75 chr2 225957755 225957942 -27298641 + MIR SINE MIR 66 258 -4 241 67 167 83 chr2 225958854 225958914 -27297669 + LTR54 LTR ERV1 402 466 -44 325 346 134 0 chr2 225958970 225959097 -27297486 + MLT1J2 LTR MaLR 189 332 -118 298 211 13 13 chr2 225959105 225959181 -27297402 + MLT1J1 LTR MaLR 371 446 0 291 331 25 0 chr2 225959181 225959300 -27297283 + MARNA DNA Mariner 180 301 -285 281 333 0 0 chr2 225959362 225959461 -27297122 + MARNA DNA Mariner 403 501 -85 519 228 61 78 chr2 225959756 225959885 -27296698 - MIR3 SINE MIR -7 201 74 1867 117 82 63 chr2 225959885 225960252 -27296331 + THE1C LTR MaLR 2 375 0 519 228 61 78 chr2 225960252 225960302 -27296281 - MIR3 SINE MIR -134 74 25 226 250 48 60 chr2 225961270 225961354 -27295229 - REP3 LTR ERV -70 492 410 1903 156 3 0 chr2 225961650 225961945 -27294638 - AluJo SINE Alu -16 296 1 581 327 80 46 chr2 225962605 225963106 -27293477 + L2 LINE L2 2684 3198 -74 1133 149 0 0 chr2 225963360 225963541 -27293042 - AluJo SINE Alu -12 300 120 337 149 0 0 chr2 225963565 225963612 -27292971 + Alu SINE Alu 1 47 -254 432 198 174 0 chr2 225963635 225963721 -27292862 - AluJ/FLAM SINE Alu -210 102 2 342 243 110 22 chr2 225964088 225964224 -27292359 + MIR SINE MIR 6 153 -109 438 321 111 19 chr2 225967043 225967205 -27289378 + MIR3 SINE MIR 4 180 -28 424 242 29 145 chr2 225967278 225967688 -27288895 + MLT1I LTR MaLR 83 409 0 2235 74 7 11 chr2 225969783 225970089 -27286494 - AluY SINE Alu 0 305 1 529 320 75 30 chr2 225970489 225971029 -27285554 - L2 LINE L2 0 3272 2709 247 317 66 36 chr2 225971941 225972108 -27284475 + MIR SINE MIR 20 191 -71 745 275 47 0 chr2 225972214 225972447 -27284136 + MIR SINE MIR 17 260 -2 1868 150 20 13 chr2 225972623 225972923 -27283660 - AluJo SINE Alu -10 302 1 195 42 0 0 chr2 225973847 225973871 -27282712 + (CA)n Simple_repeat Simple_repeat 2 25 0 228 323 0 11 chr2 225974382 225974475 -27282108 + CT-rich Low_complexity Low_complexity 3 94 0 196 161 0 0 chr2 225974490 225974521 -27282062 + MER5A DNA MER1_type 13 43 -146 227 233 0 14 chr2 225974745 225974818 -27281765 + CT-rich Low_complexity Low_complexity 2 73 0 378 273 84 0 chr2 225975641 225975784 -27280799 - MER102a DNA MER1_type 0 330 176 1356 175 4 4 chr2 225976020 225976248 -27280335 - AluJb SINE Alu -7 305 78 215 307 43 100 chr2 225976390 225976670 -27279913 + L2 LINE L2 2956 3219 -53 224 360 20 0 chr2 225976761 225976861 -27279722 + L2 LINE L2 3193 3294 -19 1745 144 62 0 chr2 225977819 225978110 -27278473 + AluSx SINE Alu 3 311 -1 203 209 72 0 chr2 225978527 225978585 -27277998 - MIR SINE MIR -83 125 64 1771 42 0 0 chr2 225979142 225979356 -27277227 + L1PA4 LINE L1 5939 6152 -3 444 289 64 41 chr2 225979368 225979520 -27277063 + MIR SINE MIR 20 180 -82 1894 156 0 17 chr2 225979520 225979822 -27276761 - AluJb SINE Alu -15 297 1 444 289 64 41 chr2 225979822 225979887 -27276696 + MIR SINE MIR 180 242 -20 1507 127 13 4 chr2 225980330 225980566 -27276017 + MER34B LTR ERV1 2 239 -326 240 158 0 0 chr2 225980566 225980623 -27275960 + (TA)n Simple_repeat Simple_repeat 2 58 0 649 99 0 0 chr2 225980623 225980714 -27275869 - AluY SINE Alu -3 308 218 1441 188 38 41 chr2 225980721 225981061 -27275522 + MER34B LTR ERV1 221 559 -6 312 271 75 9 chr2 225981425 225981532 -27275051 + MIR SINE MIR 7 120 -142 3305 251 70 23 chr2 225981542 225982872 -27273711 - L2 LINE L2 -2 3311 1912 641 231 50 11 chr2 225982872 225983054 -27273529 - L2 LINE L2 -1883 1431 1243 248 211 0 0 chr2 225983115 225983167 -27273416 + MIR SINE MIR 209 260 -2 200 222 0 0 chr2 225985126 225985171 -27271412 + A-rich Low_complexity Low_complexity 1 45 0 322 225 22 22 chr2 225986161 225986250 -27270333 - MER5A DNA MER1_type -3 186 98 279 295 11 0 chr2 225986441 225986536 -27270047 + MIR SINE MIR 42 137 -125 205 282 26 13 chr2 225986718 225986796 -27269787 + MIR SINE MIR 122 200 -62 1233 142 12 10 chr2 225986805 225987059 -27269524 - AluJo SINE Alu -1 311 2 2276 114 0 0 chr2 225987421 225987729 -27268854 + AluSg SINE Alu 1 308 -2 1331 107 0 16 chr2 225987735 225987922 -27268661 + AluSg/x SINE Alu 118 301 -9 1897 108 0 15 chr2 225989068 225989336 -27267247 - AluSp SINE Alu -14 299 36 2076 134 13 7 chr2 225989812 225990119 -27266464 - AluJb SINE Alu -3 309 1 378 255 75 0 chr2 225990409 225990515 -27266068 - L1ME LINE L1 -460 5661 5548 185 339 50 16 chr2 225991032 225991153 -27265430 - L3b LINE CR1 -134 1449 1325 301 247 107 56 chr2 225991266 225991497 -27265086 - MLT1H LTR MaLR -31 518 202 229 302 0 0 chr2 225991606 225991669 -27264914 - MLT1H LTR MaLR -486 63 1 263 254 0 0 chr2 225991670 225991733 -27264850 + MIR SINE MIR 78 140 -122 336 152 0 0 chr2 225991857 225991923 -27264660 + (TA)n Simple_repeat Simple_repeat 2 67 0 1714 175 4 11 chr2 225991925 225992199 -27264384 - AluJb SINE Alu -40 272 1 461 242 65 0 chr2 225993331 225993455 -27263128 + MIR SINE MIR 91 222 -40 2392 60 0 33 chr2 225993780 225994081 -27262502 - AluY SINE Alu -20 291 1 2304 128 0 0 chr2 225994169 225994481 -27262102 + AluSx SINE Alu 1 312 0 24 32 0 0 chr2 225995345 225995376 -27261207 + AT_rich Low_complexity Low_complexity 1 31 0 1934 121 0 0 chr2 225996265 225996522 -27260061 + AluSx SINE Alu 41 297 -15 234 163 0 20 chr2 225996598 225996647 -27259936 - L3 LINE CR1 -125 1452 1405 207 186 0 0 chr2 225997567 225997610 -27258973 + (CAT)n Simple_repeat Simple_repeat 3 45 0 460 248 48 7 chr2 225998229 225998374 -27258209 - MIR SINE MIR -65 197 47 213 39 0 0 chr2 225998532 225998558 -27258025 + (CA)n Simple_repeat Simple_repeat 1 26 0 1547 163 0 41 chr2 225999361 225999631 -27256952 + AluJo SINE Alu 46 304 -8 1715 174 7 13 chr2 225999673 225999977 -27256606 + AluJb SINE Alu 1 302 -10 241 389 64 0 chr2 226000783 226000940 -27255643 + L3b LINE CR1 1294 1460 -123 651 247 138 76 chr2 226000995 226001457 -27255126 + MLT1K LTR MaLR 98 588 0 586 333 129 31 chr2 226001617 226001808 -27254775 - L3 LINE CR1 0 1577 1406 1895 167 7 7 chr2 226001808 226002114 -27254469 - AluJo SINE Alu -6 306 1 586 333 129 31 chr2 226002114 226002474 -27254109 - L3 LINE CR1 -171 1406 972 376 296 74 79 chr2 226002531 226002832 -27253751 - L1ME4a LINE L1 -45 6076 5775 2096 126 0 0 chr2 226002832 226003110 -27253473 - AluSx SINE Alu -34 278 1 376 296 74 79 chr2 226003110 226003515 -27253068 - L1ME4a LINE L1 -346 5775 5374 2458 194 52 8 chr2 226003534 226003667 -27252916 - L1PB4 LINE L1 -3 6153 6021 2808 195 77 13 chr2 226003667 226004793 -27251790 - L1MA5A LINE L1 -300 5997 4793 335 194 28 0 chr2 226004860 226004932 -27251651 - L1ME LINE L1 -675 5446 5373 228 213 16 16 chr2 226005654 226005715 -27250868 + L1P LINE L1 4941 5001 -1145 603 325 64 42 chr2 226005730 226005879 -27250704 - L2 LINE L2 -9 3304 3160 2114 132 10 0 chr2 226005879 226006175 -27250408 - AluSx SINE Alu -13 299 1 603 325 64 42 chr2 226006175 226006382 -27250201 - L2 LINE L2 -153 3160 2940 1108 292 142 26 chr2 226006629 226007381 -27249202 + L1ME4a LINE L1 5286 6119 -2 431 267 0 17 chr2 226008282 226008402 -27248181 - MER5A DNA MER1_type -67 122 5 2206 117 3 3 chr2 226008968 226009267 -27247316 - AluSx SINE Alu -13 299 1 870 246 160 18 chr2 226009870 226010315 -27246268 - L2 LINE L2 -41 3272 2773 230 236 83 0 chr2 226010433 226010505 -27246078 + L1ME4a LINE L1 5976 6053 -68 2101 129 0 0 chr2 226010580 226010894 -27245689 + AluSx SINE Alu 2 315 0 290 282 14 0 chr2 226010929 226011000 -27245583 + L2 LINE L2 3200 3271 -1 600 293 65 20 chr2 226011869 226012115 -27244468 - MIR SINE MIR 0 262 6 2126 93 3 35 chr2 226012156 226012529 -27244054 - AluSg SINE Alu 0 366 3 246 257 124 29 chr2 226012766 226012871 -27243712 - L2 LINE L2 0 3313 3199 444 314 31 47 chr2 226013358 226013549 -27243034 - MER91A DNA MER1_type -8 188 1 2183 104 0 14 chr2 226014095 226014392 -27242191 + AluSx SINE Alu 1 293 -19 342 273 38 69 chr2 226014784 226014936 -27241647 + MIR SINE MIR 13 154 -108 23911 30 0 3 chr2 226014936 226018518 -27238065 + L1PA3 LINE L1 2555 6141 -14 213 0 36 0 chr2 226018518 226018546 -27238037 + (TAAA)n Simple_repeat Simple_repeat 3 168 0 342 273 38 69 chr2 226018556 226018654 -27237929 + MIR SINE MIR 154 254 -8 482 139 0 0 chr2 226018708 226018787 -27237796 - L1ME2 LINE L1 0 6164 6086 289 347 32 0 chr2 226019081 226019176 -27237407 - L3b LINE CR1 -115 1468 1371 339 234 19 117 chr2 226019356 226019510 -27237073 - MER102a DNA MER1_type -107 223 85 240 163 0 0 chr2 226019514 226019557 -27237026 + A-rich Low_complexity Low_complexity 1 43 0 1920 96 12 0 chr2 226019717 226019968 -27236615 - AluSc SINE Alu -2 307 54 247 239 119 15 chr2 226019991 226020058 -27236525 - MIR SINE MIR -77 131 58 1973 132 47 0 chr2 226020312 226020608 -27235975 + AluSq SINE Alu 1 310 -3 2379 49 0 3 chr2 226020655 226020968 -27235615 + AluY SINE Alu 1 312 0 3546 255 79 76 chr2 226021061 226021361 -27235222 + L1MEc LINE L1 2061 2359 -3856 1582 142 30 56 chr2 226021361 226021664 -27234919 + AluJo SINE Alu 1 295 -17 3546 255 79 76 chr2 226021664 226023665 -27232918 + L1MEc LINE L1 2359 4293 -1922 2177 131 0 3 chr2 226023665 226023978 -27232605 + AluSx SINE Alu 1 312 0 3546 255 79 76 chr2 226023978 226024255 -27232328 + L1MEc LINE L1 4293 4568 -1647 1558 285 59 9 chr2 226024302 226025165 -27231418 + L1MEc LINE L1 4791 5697 -536 21 0 0 0 chr2 226025514 226025535 -27231048 + AT_rich Low_complexity Low_complexity 1 21 0 1263 224 174 38 chr2 226025556 226025970 -27230613 + MLT1E2 LTR MaLR 3 455 -50 1805 155 17 10 chr2 226025970 226026260 -27230323 - AluJo SINE Alu -20 292 1 1263 224 174 38 chr2 226026260 226026315 -27230268 + MLT1E2 LTR MaLR 455 501 -4 2342 112 0 0 chr2 226027342 226027647 -27228936 + AluSx SINE Alu 1 305 -7 245 208 14 28 chr2 226028110 226028182 -27228401 + (TCTG)n Simple_repeat Simple_repeat 2 72 0 207 0 0 0 chr2 226028299 226028322 -27228261 + (A)n Simple_repeat Simple_repeat 1 23 0 318 241 12 36 chr2 226028322 226028405 -27228178 + L1ME LINE L1 5558 5638 -483 1585 116 0 5 chr2 226028428 226028644 -27227939 + AluSx SINE Alu 3 217 -95 937 168 0 12 chr2 226028749 226028910 -27227673 + AluSg/x SINE Alu 69 227 -83 234 91 0 0 chr2 226028926 226028959 -27227624 + (A)n Simple_repeat Simple_repeat 1 33 0 2483 89 0 6 chr2 226029001 226029314 -27227269 - AluSq SINE Alu -2 311 1 21 0 0 0 chr2 226029428 226029449 -27227134 + AT_rich Low_complexity Low_complexity 1 21 0 1458 143 8 49 chr2 226029594 226029773 -27226810 + MER46A DNA MER2_type 2 187 -2544 2323 58 0 4 chr2 226029773 226030050 -27226533 + AluY SINE Alu 1 276 -35 227 30 0 30 chr2 226030055 226030088 -27226495 + (CAAAA)n Simple_repeat Simple_repeat 1 32 0 1458 143 8 49 chr2 226030088 226030147 -27226436 + MER46A DNA MER2_type 191 236 0 2318 106 0 0 chr2 226030163 226030465 -27226118 + AluSx SINE Alu 1 302 -10 1314 254 76 13 chr2 226030491 226030939 -27225644 + L1MEc LINE L1 1247 1722 -4674 2161 121 3 0 chr2 226031122 226031412 -27225171 - AluSx SINE Alu -21 291 1 1984 141 16 3 chr2 226032008 226032313 -27224270 - AluSx SINE Alu -3 309 1 2238 98 3 0 chr2 226032400 226032696 -27223887 - AluY SINE Alu -14 297 1 1926 145 0 23 chr2 226033077 226033381 -27223202 - AluJo SINE Alu -15 297 1 25 0 0 0 chr2 226033882 226033907 -27222676 + AT_rich Low_complexity Low_complexity 1 25 0 585 143 31 0 chr2 226034450 226034548 -27222035 - FRAM SINE Alu -3 173 73 213 94 0 0 chr2 226034572 226034604 -27221979 + (ATG)n Simple_repeat Simple_repeat 3 34 0 1883 134 17 21 chr2 226034605 226034895 -27221688 - AluSq SINE Alu -24 289 1 189 0 0 0 chr2 226034917 226034938 -27221645 + (T)n Simple_repeat Simple_repeat 1 21 0 2452 80 0 3 chr2 226034948 226035260 -27221323 + AluY SINE Alu 1 311 0 243 162 0 0 chr2 226035346 226035383 -27221200 + tRNA-Met-e tRNA tRNA 1 37 -38 2116 120 34 0 chr2 226036046 226036337 -27220246 - AluSp SINE Alu -12 301 1 323 321 132 0 chr2 226036395 226036585 -27219998 - L1MC/D LINE L1 -2019 5789 5575 2064 130 10 3 chr2 226036712 226037011 -27219572 + AluSx SINE Alu 1 301 -11 273 57 0 0 chr2 226037011 226037046 -27219537 + (TA)n Simple_repeat Simple_repeat 1 35 0 540 133 86 13 chr2 226037047 226037198 -27219385 - Charlie1 DNA MER1_type -76 2685 2524 1524 102 5 5 chr2 226037221 226037427 -27219156 - AluSx SINE Alu -106 206 1 1475 157 29 103 chr2 226037700 226038050 -27218533 - MER33 DNA MER1_type 0 324 1 185 344 75 11 chr2 226038050 226038143 -27218440 - L2 LINE L2 -47 3225 3127 909 188 88 0 chr2 226038144 226038304 -27218279 - MER96 DNA MER1_type -1 174 1 430 292 26 26 chr2 226038304 226038458 -27218125 - MER5A DNA MER1_type -35 154 1 949 191 35 0 chr2 226038604 226038777 -27217806 - AluYa5 SINE Alu -7 304 126 2267 82 0 14 chr2 226039914 226040208 -27216375 + AluY SINE Alu 1 290 -21 255 170 0 0 chr2 226040208 226040255 -27216328 + (TA)n Simple_repeat Simple_repeat 2 48 0 268 253 0 22 chr2 226040255 226040346 -27216237 - L1MC4 LINE L1 -1339 6703 6615 257 311 0 0 chr2 226040301 226040391 -27216192 + L1MC4 LINE L1 6614 6703 -1339 * 1149 138 0 0 chr2 226040400 226040560 -27216023 + AluY SINE Alu 133 292 -19 219 387 19 0 chr2 226040638 226040744 -27215839 - MIR3 SINE MIR -10 198 91 4600 161 65 18 chr2 226040988 226041810 -27214773 - MER21B LTR ERV1 -3 860 1 461 283 63 19 chr2 226042268 226042427 -27214156 + MIR SINE MIR 31 196 -66 2311 105 0 7 chr2 226042432 226042737 -27213846 - AluSq SINE Alu -10 303 1 1758 158 34 10 chr2 226042770 226043068 -27213515 + AluJb SINE Alu 1 305 -7 538 301 99 62 chr2 226043098 226043483 -27213100 - MLT1K LTR MaLR -41 547 149 394 254 150 17 chr2 226043633 226043806 -27212777 - MIR SINE MIR -9 253 58 2040 115 3 56 chr2 226044395 226044718 -27211865 + AluSx SINE Alu 1 306 -6 2037 134 0 0 chr2 226045206 226045517 -27211066 - AluSx SINE Alu 0 311 1 202 224 53 66 chr2 226045527 226045603 -27210980 - MER5A DNA MER1_type -68 121 47 528 208 85 23 chr2 226045603 226045733 -27210850 + MER96 DNA MER1_type? 1 138 -37 370 333 48 0 chr2 226046207 226046312 -27210271 - L2 LINE L2 -26 3246 3137 697 240 46 10 chr2 226046489 226046685 -27209898 - LTR16B LTR ERVL -7 457 255 350 324 50 38 chr2 226047107 226047345 -27209238 - HERVL LTR ERVL -711 4285 4045 1053 221 97 79 chr2 226047355 226047533 -27209050 - LTR41 LTR ERVL -27 746 573 2101 126 7 3 chr2 226047533 226047834 -27208749 + AluSx SINE Alu 1 302 -10 1053 221 97 79 chr2 226047834 226048048 -27208535 - LTR41 LTR ERVL -200 573 347 516 196 74 34 chr2 226048081 226048229 -27208354 - LTR41 LTR ERVL -590 183 30 260 316 35 52 chr2 226048239 226048413 -27208170 - HERVL LTR ERVL -1348 4306 4136 860 255 78 37 chr2 226048743 226049065 -27207518 - LTR16B LTR ERVL -127 337 3 314 149 6 34 chr2 226049876 226049942 -27206641 + MIR SINE MIR 23 89 -119 302 238 127 48 chr2 226050044 226050170 -27206413 + L1MC5 LINE L1 7752 7887 -74 963 124 0 32 chr2 226051607 226051792 -27204791 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 764 56 48 8 chr2 226051800 226051925 -27204658 + CT-rich Low_complexity Low_complexity 4 133 0 2028 113 0 0 chr2 226051930 226052195 -27204388 - AluSq SINE Alu -48 265 1 351 0 0 0 chr2 226052324 226052363 -27204220 + (TG)n Simple_repeat Simple_repeat 1 39 0 270 0 0 0 chr2 226052362 226052392 -27204191 + (GA)n Simple_repeat Simple_repeat 1 30 0 * 1867 119 3 68 chr2 226052475 226052769 -27203814 + AluSx SINE Alu 19 293 -19 204 208 21 21 chr2 226052787 226052835 -27203748 - MIR SINE MIR 0 262 215 5041 66 33 65 chr2 226052949 226053687 -27202896 - SVA Other Other -614 772 59 1220 0 0 53 chr2 226053687 226053877 -27202706 + (GGGAGA)n Simple_repeat Simple_repeat 1 180 0 5041 66 33 65 chr2 226053877 226053927 -27202656 - SVA Other Other -1327 59 9 707 92 50 25 chr2 226054018 226054138 -27202445 - L1MA4A LINE L1 -6 6297 6175 284 70 93 0 chr2 226054139 226054182 -27202401 - L1 LINE L1 -940 5908 5862 2616 7 0 0 chr2 226054182 226054541 -27202042 - AluY SINE Alu 0 359 1 16048 167 42 30 chr2 226054619 226055418 -27201165 - L1 LINE L1 -1098 5750 4962 258 56 0 0 chr2 226055418 226055454 -27201129 + (TG)n Simple_repeat Simple_repeat 1 36 0 16048 167 42 30 chr2 226055454 226057576 -27199007 - L1 LINE L1 -1886 4962 2867 1932 149 0 23 chr2 226057576 226057928 -27198655 - AluSx SINE Alu 0 312 1 16048 167 42 30 chr2 226057928 226058550 -27198033 - L1 LINE L1 -3981 2867 2254 2459 73 0 3 chr2 226058550 226058853 -27197730 - AluSg SINE Alu -8 302 1 16048 167 42 30 chr2 226058853 226060986 -27195597 - L1 LINE L1 -4594 2254 3 397 317 87 0 chr2 226061380 226061541 -27195042 - MIR3 SINE MIR -12 196 22 468 265 245 20 chr2 226062167 226062227 -27194356 - MIR SINE MIR 0 262 217 1160 152 104 70 chr2 226062227 226062457 -27194126 + MER8 DNA MER2_type 1 238 -1 468 265 245 20 chr2 226062457 226062600 -27193983 - MIR SINE MIR -45 217 13 2104 116 14 0 chr2 226063088 226063382 -27193201 - AluSx SINE Alu -14 298 1 466 250 16 73 chr2 226063425 226063551 -27193032 - Charlie8 DNA MER1_type -2152 265 152 1796 159 7 27 chr2 226063551 226063846 -27192737 + AluJb SINE Alu 1 289 -23 466 250 16 73 chr2 226063846 226063911 -27192672 - Charlie8 DNA MER1_type -2265 152 85 387 0 0 0 chr2 226064138 226064181 -27192402 + (TG)n Simple_repeat Simple_repeat 2 44 0 1973 120 33 4 chr2 226064181 226064456 -27192127 - AluSg SINE Alu -27 283 1 543 322 61 9 chr2 226064761 226064975 -27191608 + MIR SINE MIR 34 258 -4 1403 161 47 24 chr2 226065107 226065402 -27191181 + MER33 DNA MER1_type 1 286 -38 930 184 0 3 chr2 226065402 226065646 -27190937 + AluJb SINE Alu 1 311 -1 320 148 0 0 chr2 226065668 226065722 -27190861 + MER33 DNA MER1_type 309 362 -1 280 277 0 0 chr2 226065725 226065790 -27190793 + L2 LINE L2 3249 3313 0 1049 95 18 36 chr2 226065791 226065898 -27190685 + L1MA5A LINE L1 6129 6233 -64 2413 116 73 14 chr2 226065898 226066242 -27190341 - THE1B LTR MaLR 0 364 1 1049 95 18 36 chr2 226066242 226066302 -27190281 + L1MA5A LINE L1 6233 6293 -4 265 305 38 8 chr2 226066470 226066601 -27189982 - MIR SINE MIR -116 146 12 315 0 0 0 chr2 226067035 226067070 -27189513 + (CA)n Simple_repeat Simple_repeat 2 36 0 25 0 0 0 chr2 226067625 226067650 -27188933 + AT_rich Low_complexity Low_complexity 1 25 0 181 333 0 0 chr2 226067689 226067731 -27188852 - L2 LINE L2 -94 3178 3137 2558 63 0 0 chr2 226067882 226068182 -27188401 + AluY SINE Alu 3 302 -9 189 213 0 0 chr2 226069085 226069132 -27187451 + (TTCA)n Simple_repeat Simple_repeat 4 50 0 1396 275 76 21 chr2 226069562 226069958 -27186625 + LTR16B LTR ERVL 1 425 -39 1799 183 58 11 chr2 226069958 226070336 -27186247 - MSTD LTR MaLR 0 396 1 1396 275 76 21 chr2 226070336 226070375 -27186208 + LTR16B LTR ERVL 425 460 -4 420 353 13 7 chr2 226070503 226070656 -27185927 + L2 LINE L2 3119 3272 0 254 296 45 30 chr2 226070902 226071034 -27185549 - L2 LINE L2 -213 3059 2926 1999 114 4 0 chr2 226071154 226071439 -27185144 - AluSx SINE Alu 0 307 22 2208 109 0 0 chr2 226072362 226072647 -27183936 - AluSx SINE Alu -27 285 1 252 208 0 0 chr2 226072651 226072704 -27183879 - L1ME LINE L1 -297 5824 5772 375 287 88 42 chr2 226072956 226073287 -27183296 - L1ME4a LINE L1 -239 5882 5537 227 279 48 79 chr2 226073295 226073460 -27183123 + MLT1J LTR MaLR 2 161 -350 2114 117 0 38 chr2 226073515 226073832 -27182751 - AluSq SINE Alu -8 305 1 371 333 66 14 chr2 226073903 226074116 -27182467 + MLT1L LTR MaLR 374 597 -18 4605 82 23 5 chr2 226074194 226074851 -27181732 - L1MA3 LINE L1 -10 6295 5627 5124 137 6 10 chr2 226074851 226075406 -27181177 + L1M1 LINE L1 4487 5043 -1262 1956 149 55 22 chr2 226075406 226075769 -27180814 - THE1C LTR MaLR 0 375 1 5124 137 6 10 chr2 226075769 226076401 -27180182 + L1M1 LINE L1 5043 5666 -639 257 259 116 9 chr2 226076493 226076605 -27179978 - MIR SINE MIR -55 207 84 2183 113 3 3 chr2 226077066 226077367 -27179216 + AluSx SINE Alu 7 307 -5 2566 102 13 8 chr2 226077367 226077750 -27178833 + L1P LINE L1 3295 3679 -2467 2458 93 0 0 chr2 226077925 226078237 -27178346 - AluSx SINE Alu 0 312 1 394 143 12 168 chr2 226078243 226078404 -27178179 + MER104 DNA Tc2 42 177 -3 294 29 0 0 chr2 226079104 226079139 -27177444 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 1802 178 3 16 chr2 226079576 226079891 -27176692 - AluJo SINE Alu -1 311 1 642 183 22 15 chr2 226080347 226080484 -27176099 - MER5A DNA MER1_type 0 189 52 1231 120 32 9 chr2 226080485 226080701 -27175882 + AluSp SINE Alu 1 221 -92 631 215 67 7 chr2 226080876 226081011 -27175572 - MER58B DNA MER1_type -2 339 197 545 222 58 34 chr2 226081752 226081959 -27174624 + L1MEc LINE L1 2086 2297 -4099 499 91 26 0 chr2 226081995 226082072 -27174511 + AluSc SINE Alu 2 80 -229 2620 47 3 0 chr2 226082666 226082964 -27173619 + AluY SINE Alu 1 299 -12 297 294 203 0 chr2 226083381 226083534 -27173049 - MIR SINE MIR -8 254 71 27 49 0 0 chr2 226083593 226083634 -27172949 + AT_rich Low_complexity Low_complexity 1 41 0 1746 157 10 17 chr2 226084640 226084933 -27171650 - AluJb SINE Alu -21 291 1 270 322 17 17 chr2 226085019 226085134 -27171449 - MER5A DNA MER1_type -30 159 45 198 385 21 21 chr2 226085020 226085163 -27171420 + MER5A DNA MER1_type 43 185 -4 * 422 83 28 28 chr2 226085698 226085770 -27170813 + L1M3 LINE L1 5575 5646 -534 366 145 16 0 chr2 226086635 226086697 -27169886 + L1P LINE L1 5028 5090 -1056 467 199 71 7 chr2 226087101 226087242 -27169341 + L1ME4a LINE L1 5972 6121 0 253 301 68 43 chr2 226087738 226087901 -27168682 - MIR SINE MIR -6 256 90 594 293 86 47 chr2 226088006 226088388 -27168195 + LTR33A LTR ERVL 127 523 0 209 215 76 19 chr2 226088388 226088446 -27168137 - MIR SINE MIR -118 90 29 556 296 104 0 chr2 226088453 226088673 -27167910 - MIR SINE MIR -1 261 19 183 156 0 0 chr2 226089340 226089372 -27167211 + (TTCA)n Simple_repeat Simple_repeat 4 35 0 401 232 73 20 chr2 226090466 226090617 -27165966 - MIR3 SINE MIR -12 196 38 198 296 0 19 chr2 226091255 226091309 -27165274 - L2 LINE L2 -27 3286 3234 348 282 158 37 chr2 226091621 226091862 -27164721 - Charlie8 DNA MER1_type -2147 270 1 259 206 155 21 chr2 226091870 226091967 -27164616 - MIR SINE MIR -33 229 120 1696 182 46 51 chr2 226092841 226093214 -27163369 - MLT1A2 LTR MaLR 0 374 4 332 337 21 23 chr2 226093329 226093478 -27163105 - MIR SINE MIR -64 144 46 237 98 0 0 chr2 226093886 226093927 -27162656 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 270 268 0 130 chr2 226093931 226094069 -27162514 + MER112 DNA MER1_type 108 227 -33 283 192 0 0 chr2 226094672 226094724 -27161859 - L2 LINE L2 -1901 1413 1362 788 170 67 12 chr2 226095170 226095335 -27161248 - MER5B DNA MER1_type -4 174 1 403 265 0 10 chr2 226095347 226095449 -27161134 + MER5A DNA MER1_type 9 109 -80 629 221 9 0 chr2 226095756 226095869 -27160714 - MER81 DNA DNA 0 114 1 342 248 177 0 chr2 226096044 226096157 -27160426 - L2 LINE L2 -1 3312 3180 452 296 62 57 chr2 226096313 226096471 -27160112 - L2 LINE L2 -343 2971 2815 2318 132 114 8 chr2 226096471 226096858 -27159725 + MSTA LTR MaLR 1 428 0 452 296 62 57 chr2 226096858 226097101 -27159482 - L2 LINE L2 -499 2815 2568 1702 94 0 17 chr2 226097181 226097414 -27159169 + AluSg/x SINE Alu 81 309 0 1055 244 103 22 chr2 226097497 226097585 -27158998 - L1MC4a LINE L1 0 7808 7729 3866 102 14 20 chr2 226097585 226097683 -27158900 + MER41A LTR ERV1 1 98 -456 2300 107 3 7 chr2 226097683 226097992 -27158591 - AluSp SINE Alu -5 308 1 3866 102 14 20 chr2 226097992 226098450 -27158133 + MER41A LTR ERV1 98 554 0 1055 244 103 22 chr2 226098450 226098721 -27157862 - L1MC4a LINE L1 -79 7729 7420 221 263 107 86 chr2 226099030 226099273 -27157310 - L2 LINE L2 -21 3251 3004 229 159 32 16 chr2 226099760 226099823 -27156760 + (CATGC)n Simple_repeat Simple_repeat 5 68 0 224 318 8 0 chr2 226099874 226100006 -27156577 + C-rich Low_complexity Low_complexity 6 138 0 223 261 68 50 chr2 226099949 226100110 -27156473 + (CACAC)n Simple_repeat Simple_repeat 5 168 0 * 280 198 42 52 chr2 226100143 226100239 -27156344 + (CACAC)n Simple_repeat Simple_repeat 4 98 0 211 429 83 0 chr2 226100434 226100567 -27156016 + L2 LINE L2 3121 3264 -8 763 89 0 0 chr2 226101055 226101156 -27155427 + HY3 scRNA scRNA 1 101 0 40 0 0 0 chr2 226101156 226101196 -27155387 + AT_rich Low_complexity Low_complexity 1 40 0 260 247 12 74 chr2 226101290 226101371 -27155212 + L2 LINE L2 3198 3273 -40 185 277 0 0 chr2 226101385 226101432 -27155151 + MIR SINE MIR 101 147 -61 857 156 0 14 chr2 226102168 226102309 -27154274 - FLAM_C SINE Alu -4 139 1 470 298 136 38 chr2 226102309 226102625 -27153958 + L2 LINE L2 2925 3271 -1 2213 137 0 0 chr2 226103193 226103500 -27153083 - AluSx SINE Alu -5 307 1 2255 106 0 0 chr2 226104544 226104928 -27151655 - AluSx SINE Alu 0 384 1 472 220 133 20 chr2 226104972 226105122 -27151461 - L1MC5 LINE L1 -48 7913 7747 21 0 0 0 chr2 226105160 226105181 -27151402 + AT_rich Low_complexity Low_complexity 1 21 0 552 253 57 26 chr2 226106091 226106285 -27150298 - MIR SINE MIR -61 201 2 1221 205 9 124 chr2 226106346 226106397 -27150186 - L1MC4a LINE L1 0 7808 7753 2422 81 3 0 chr2 226106397 226106693 -27149890 + AluSq SINE Alu 1 297 -16 1221 205 9 124 chr2 226106693 226106993 -27149590 - L1MC4a LINE L1 -55 7753 7604 1654 190 14 0 chr2 226106993 226107277 -27149306 - AluJb SINE Alu -24 288 1 1221 205 9 124 chr2 226107277 226107367 -27149216 - L1MC4a LINE L1 -204 7604 7505 612 279 9 23 chr2 226107742 226107961 -27148622 - MIR SINE MIR -40 222 7 242 307 0 20 chr2 226108257 226108358 -27148225 - MIR SINE MIR -10 252 154 240 302 52 35 chr2 226108394 226108510 -27148073 + MLT1J1 LTR MaLR 44 161 -285 438 200 18 45 chr2 226108689 226108799 -27147784 - MLT1J2 LTR MaLR 0 450 344 3816 152 6 27 chr2 226108946 226109570 -27147013 + LTR36 LTR ERV1 1 611 0 1340 216 73 31 chr2 226109868 226110042 -27146541 + MER113 DNA MER1_type? 13 178 -343 2817 128 65 43 chr2 226110042 226110484 -27146099 + L1MC1 LINE L1 5765 6223 -110 793 118 0 125 chr2 226110484 226110636 -27145947 - FLAM_C SINE Alu 0 133 1 2817 128 65 43 chr2 226110636 226110750 -27145833 + L1MC1 LINE L1 6223 6333 0 1340 216 73 31 chr2 226110750 226111000 -27145583 + MER113 DNA MER1_type? 178 455 -66 418 320 6 19 chr2 226111623 226111779 -27144804 - MIR SINE MIR -108 154 1 193 289 0 0 chr2 226112047 226112092 -27144491 - L2 LINE L2 -22 3250 3206 299 258 58 17 chr2 226113702 226113822 -27142761 - L3 LINE CR1 -149 1428 1304 240 360 9 9 chr2 226113938 226114049 -27142534 - L2 LINE L2 -9 3304 3194 2021 274 116 21 chr2 226114055 226114687 -27141896 + MER115 DNA AcHobo 1 692 -1 200 324 95 0 chr2 226115229 226115303 -27141280 - L3b LINE CR1 -207 1376 1296 460 227 70 23 chr2 226115780 226115908 -27140675 - MIR SINE MIR -39 223 90 1048 311 21 21 chr2 226116179 226116606 -27139977 + L2 LINE L2 2887 3313 0 296 188 14 0 chr2 226116946 226117015 -27139568 + CT-rich Low_complexity Low_complexity 1 70 0 22 0 0 0 chr2 226121945 226121967 -27134616 + GC_rich Low_complexity Low_complexity 1 22 0 395 280 11 48 chr2 226122051 226122237 -27134346 + GA-rich Low_complexity Low_complexity 2 180 0 347 254 69 23 chr2 226122634 226122764 -27133819 + L2 LINE L2 3171 3306 -7 225 0 0 0 chr2 226123162 226123187 -27133396 + (TC)n Simple_repeat Simple_repeat 1 25 0 * 261 0 0 0 chr2 226123186 226123215 -27133368 + (CA)n Simple_repeat Simple_repeat 1 29 0 22 70 0 0 chr2 226123539 226123582 -27133001 + AT_rich Low_complexity Low_complexity 1 43 0 256 363 70 32 chr2 226123704 226123861 -27132722 + L2 LINE L2 3110 3272 0 2221 98 10 0 chr2 226124086 226124391 -27132192 + AluSp SINE Alu 1 308 -5 359 0 43 0 chr2 226124396 226124442 -27132141 + (GAAA)n Simple_repeat Simple_repeat 2 49 0 2235 101 0 3 chr2 226124567 226124874 -27131709 + AluSx SINE Alu 1 306 -6 207 289 0 0 chr2 226125053 226125105 -27131478 - L2 LINE L2 0 3313 3262 197 337 168 0 chr2 226125341 226125436 -27131147 - L2 LINE L2 -264 3049 2939 187 303 42 92 chr2 226126001 226126120 -27130463 - MIR SINE MIR -66 142 30 411 328 0 31 chr2 226126244 226126372 -27130211 + MER5A DNA MER1_type 38 161 -28 * 492 337 65 5 chr2 226126349 226126548 -27130035 - MIR SINE MIR -50 212 2 327 272 151 0 chr2 226126649 226126786 -27129797 + MLT1E LTR MaLR 1 179 -388 1618 187 0 19 chr2 226126786 226127101 -27129482 + AluSx SINE Alu 1 309 -3 854 150 7 0 chr2 226127101 226127254 -27129329 + GA-rich Low_complexity Low_complexity 1 154 0 1460 220 48 30 chr2 226127298 226127634 -27128949 + MLT1E LTR MaLR 206 547 -46 388 223 107 58 chr2 226127938 226128059 -27128524 + L2 LINE L2 3180 3306 -7 301 130 0 0 chr2 226128313 226128359 -27128224 + MLT1F LTR MaLR 495 540 -2 287 356 31 43 chr2 226128555 226128718 -27127865 - MER5A DNA MER1_type -28 161 1 766 287 100 33 chr2 226128940 226129514 -27127069 - L2 LINE L2 -58 3255 2641 416 282 109 23 chr2 226129468 226129642 -27126941 + MIR3 SINE MIR 9 197 -11 * 266 263 0 32 chr2 226130911 226131006 -27125577 + L1ME3 LINE L1 6070 6161 -1 7839 148 23 2 chr2 226131081 226132316 -27124267 + Tigger1 DNA MER2_type 2 1262 -1156 245 216 0 118 chr2 226132317 226132419 -27124164 + L1MC4 LINE L1 6614 6703 -1339 275 241 35 0 chr2 226132419 226132477 -27124106 + (CATG)n Simple_repeat Simple_repeat 2 61 0 308 326 47 0 chr2 226132477 226132563 -27124020 - L1MC4 LINE L1 -1339 6703 6614 232 284 39 0 chr2 226132597 226132725 -27123858 - L1MC4 LINE L1 -1339 6703 6614 * 243 300 0 0 chr2 226132693 226132783 -27123800 + L1MC4 LINE L1 6614 6703 -1339 238 179 0 51 chr2 226132784 226132862 -27123721 + (TATATG)n Simple_repeat Simple_repeat 3 76 0 232 260 0 62 chr2 226132863 226132959 -27123624 + L1MC4 LINE L1 6614 6703 -1339 225 253 0 63 chr2 226132962 226133057 -27123526 + L1MC4 LINE L1 6615 6703 -1339 301 289 26 0 chr2 226133100 226133176 -27123407 - L1MC4 LINE L1 -1350 6692 6615 225 119 0 0 chr2 226133177 226133219 -27123364 - LTR66 LTR ERVL -171 439 398 1868 122 18 3 chr2 226133244 226133530 -27123053 - AluSx SINE Alu -22 290 1 5856 110 1 13 chr2 226133530 226134329 -27122254 + Tigger1 DNA MER2_type 1248 2038 -380 1886 135 24 0 chr2 226134329 226134626 -27121957 + AluSq SINE Alu 1 304 -9 5856 110 1 13 chr2 226134626 226134680 -27121903 + Tigger1 DNA MER2_type 2038 2091 -327 815 94 68 0 chr2 226134681 226134798 -27121785 + AluJo SINE Alu 2 126 -186 543 169 292 15 chr2 226134810 226134940 -27121643 + AluJo SINE Alu 137 302 0 1936 178 9 0 chr2 226134946 226135272 -27121311 + Tigger1 DNA MER2_type 2087 2415 -3 424 296 101 11 chr2 226135330 226135519 -27121064 + MIR SINE MIR 54 259 -3 195 184 0 0 chr2 226135972 226136010 -27120573 + (TG)n Simple_repeat Simple_repeat 2 39 0 507 197 56 70 chr2 226136029 226136171 -27120412 + MIR SINE MIR 89 228 -34 186 138 35 0 chr2 226136148 226136177 -27120406 + L2 LINE L2 3210 3239 -33 * 891 220 95 26 chr2 226137409 226137464 -27119119 + MIR SINE MIR 3 53 -209 441 272 57 90 chr2 226137464 226137887 -27118696 - MLT1I LTR MaLR 0 409 1 891 220 95 26 chr2 226137887 226138063 -27118520 + MIR SINE MIR 53 250 -12 557 282 102 24 chr2 226138331 226138730 -27117853 - LTR33 LTR ERVL -2 519 56 284 25 50 0 chr2 226139087 226139127 -27117456 + (TTTG)n Simple_repeat Simple_repeat 3 44 0 624 310 26 31 chr2 226139168 226139397 -27117186 + MLT1K LTR MaLR 67 294 -294 974 204 9 18 chr2 226139472 226139692 -27116891 - MER20 DNA MER1_type 0 219 2 1006 311 72 25 chr2 226139693 226140066 -27116517 + MLT1L LTR MaLR 148 547 -68 2448 49 0 3 chr2 226140066 226140370 -27116213 + AluY SINE Alu 1 303 -8 1006 311 72 25 chr2 226140370 226140443 -27116140 + MLT1L LTR MaLR 547 615 0 231 69 0 0 chr2 226140555 226140584 -27115999 - Alu SINE Alu -272 29 1 239 212 47 59 chr2 226140689 226140774 -27115809 + MLT1K LTR MaLR 505 588 0 21 0 0 0 chr2 226140960 226140981 -27115602 + AT_rich Low_complexity Low_complexity 1 21 0 592 278 34 29 chr2 226141082 226141287 -27115296 - MIR3 SINE MIR 0 208 3 1758 141 3 26 chr2 226141422 226141713 -27114870 + AluSx SINE Alu 1 286 -26 198 0 0 0 chr2 226141713 226141735 -27114848 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 1758 141 3 26 chr2 226141735 226141747 -27114836 + AluSx SINE Alu 286 297 -15 1755 168 0 0 chr2 226142672 226142969 -27113614 + AluJb SINE Alu 1 297 -15 190 263 0 0 chr2 226144232 226144270 -27112313 - L2 LINE L2 -42 3230 3193 197 274 16 16 chr2 226144446 226144508 -27112075 - MIR3 SINE MIR -23 185 124 2265 180 31 7 chr2 226144672 226145095 -27111488 + MLT1C LTR MaLR 35 467 0 1322 303 52 15 chr2 226145638 226146117 -27110466 - L2 LINE L2 0 3313 2817 1938 148 7 0 chr2 226146178 226146476 -27110107 + AluSx SINE Alu 1 300 -12 1797 206 150 21 chr2 226146547 226147019 -27109564 - MLT1F LTR MaLR -9 533 1 2072 179 13 15 chr2 226147805 226148202 -27108381 + MSTD LTR MaLR 1 396 0 1363 283 39 36 chr2 226148348 226148907 -27107676 + MER20B DNA MER1_type 28 588 -195 931 191 0 0 chr2 226150759 226150921 -27105662 - FAM SINE Alu -18 167 6 250 198 116 47 chr2 226151080 226151166 -27105417 - L1M4 LINE L1 -1323 4823 4732 572 251 61 0 chr2 226151175 226151338 -27105245 - MIR SINE MIR 0 262 90 257 263 105 9 chr2 226151348 226151462 -27105121 + L1MC4a LINE L1 5885 6009 -1799 22 35 0 0 chr2 226151507 226151536 -27105047 + AT_rich Low_complexity Low_complexity 1 29 0 479 222 119 8 chr2 226151598 226151724 -27104859 - MER69A DNA AcHobo -1 176 37 34 19 0 19 chr2 226151847 226151875 -27104708 + AT_rich Low_complexity Low_complexity 1 29 -22 1918 137 3 0 chr2 226151875 226152160 -27104423 + AluSx SINE Alu 2 287 -25 34 19 0 19 chr2 226152160 226152183 -27104400 + AT_rich Low_complexity Low_complexity 29 51 0 221 272 110 59 chr2 226152979 226153115 -27103468 + L3b LINE CR1 1303 1445 -138 201 74 0 0 chr2 226153537 226153564 -27103019 + (GA)n Simple_repeat Simple_repeat 2 28 0 2314 88 0 0 chr2 226153652 226153958 -27102625 + AluSx SINE Alu 1 306 -6 214 326 67 11 chr2 226154229 226154318 -27102265 + MIR SINE MIR 35 128 -134 1790 158 0 16 chr2 226154419 226154722 -27101861 + AluJo SINE Alu 9 306 -6 1628 122 11 36 chr2 226154746 226155025 -27101558 - AluSx SINE Alu 0 312 41 509 293 114 55 chr2 226155520 226156210 -27100373 + L2 LINE L2 2575 3309 -4 213 159 48 48 chr2 226156214 226156229 -27100354 + (TGAA)n Simple_repeat Simple_repeat 2 16 -48 1455 177 3 28 chr2 226156229 226156542 -27100041 + AluJb SINE Alu 1 306 0 213 159 48 48 chr2 226156542 226156587 -27099996 + (TGAA)n Simple_repeat Simple_repeat 15 64 0 305 312 113 14 chr2 226157371 226157512 -27099071 + MIR3 SINE MIR 42 196 -12 2030 134 3 0 chr2 226157909 226158215 -27098368 + AluSx SINE Alu 1 307 -5 252 191 0 21 chr2 226158215 226158262 -27098321 - LTR67 LTR ERVL -7 550 505 267 275 113 49 chr2 226158692 226158805 -27097778 + MER91A DNA MER1_type 46 171 -25 1109 233 70 67 chr2 226158805 226159178 -27097405 + MLT1A2 LTR MaLR 1 374 0 267 275 113 49 chr2 226159178 226159206 -27097377 + MER91A DNA MER1_type 171 196 0 246 254 194 0 chr2 226159206 226159272 -27097311 + MIR3 SINE MIR 118 196 -12 530 172 10 0 chr2 226159350 226159449 -27097134 - MER53 DNA DNA -1 188 89 2101 111 0 26 chr2 226160206 226160512 -27096071 - AluSq SINE Alu -15 298 1 204 241 69 35 chr2 226160537 226160595 -27095988 - MIR3 SINE MIR -3 205 146 * 219 338 12 50 chr2 226160560 226160640 -27095943 + MER5A DNA MER1_type 58 134 -55 275 239 164 0 chr2 226160710 226160777 -27095806 - MIR SINE MIR -64 144 67 335 255 78 0 chr2 226161355 226161457 -27095126 + MIR SINE MIR 116 225 -37 391 321 63 36 chr2 226162826 226163047 -27093536 + HAL1b LINE L1 1115 1341 -7 2076 86 18 0 chr2 226163549 226163827 -27092756 - AluSq SINE Alu -7 306 24 282 348 50 19 chr2 226165152 226165313 -27091270 - MIR SINE MIR -43 219 54 216 211 132 26 chr2 226165377 226165453 -27091130 + MIR SINE MIR 43 126 -82 688 264 186 0 chr2 226165894 226166114 -27090469 - MIR SINE MIR 0 262 2 1993 155 45 13 chr2 226166689 226167064 -27089519 - MLT1B LTR MaLR -2 388 2 1875 135 10 3 chr2 226167322 226167611 -27088972 - AluSx SINE Alu -21 291 1 310 297 90 57 chr2 226167748 226167960 -27088623 - L1M4 LINE L1 -3528 2618 2400 363 163 57 73 chr2 226168033 226168156 -27088427 - L1ME4a LINE L1 -70 6051 5931 358 278 136 44 chr2 226168330 226168603 -27087980 - L1ME4a LINE L1 -295 5826 5529 315 221 169 44 chr2 226168655 226168791 -27087792 - L1ME4a LINE L1 -2391 5417 5265 1841 164 3 0 chr2 226169140 226169451 -27087132 + AluJb SINE Alu 1 312 0 256 316 0 13 chr2 226170183 226170262 -27086321 - L3b LINE CR1 -224 1359 1282 719 246 28 11 chr2 226170292 226170471 -27086112 - MER5A DNA MER1_type -1 188 7 337 246 74 33 chr2 226170476 226170598 -27085985 - MER5B DNA MER1_type -2 176 50 2000 116 48 14 chr2 226170689 226170981 -27085602 - AluSq SINE Alu -11 302 1 1926 94 72 7 chr2 226171496 226171772 -27084811 + AluSx SINE Alu 1 294 -18 611 250 71 14 chr2 226172348 226172560 -27084023 - MIR SINE MIR -1 261 38 193 234 94 0 chr2 226172579 226172643 -27083940 + MIR SINE MIR 123 192 -70 183 284 68 0 chr2 226174013 226174101 -27082482 + MIR3 SINE MIR 75 168 -40 932 116 16 0 chr2 226174316 226174445 -27082138 - AluSx SINE Alu -15 297 167 2538 201 65 85 chr2 226174460 226175378 -27081205 - MER52A LTR ERV1 -53 1702 664 1313 117 0 0 chr2 226175383 226175554 -27081029 - AluSx SINE Alu -141 171 1 714 293 114 15 chr2 226178372 226178841 -27077742 - MLT1K LTR MaLR -4 584 37 323 302 32 32 chr2 226179761 226179887 -27076696 - MIR3 SINE MIR -45 163 38 669 296 56 9 chr2 226180923 226181136 -27075447 - MIR SINE MIR -10 252 30 1941 106 102 0 chr2 226181410 226181685 -27074898 - AluSq SINE Alu -10 303 1 209 200 0 0 chr2 226182567 226182617 -27073966 + T-rich Low_complexity Low_complexity 1 50 0 981 124 29 0 chr2 226182634 226182771 -27073812 - AluJb SINE Alu -171 141 1 21 0 0 0 chr2 226182776 226182797 -27073786 + AT_rich Low_complexity Low_complexity 1 21 0 264 214 48 36 chr2 226182812 226182896 -27073687 - MIR SINE MIR -75 187 103 640 121 0 20 chr2 226183396 226183495 -27073088 - FLAM_C SINE Alu -8 135 39 2356 86 3 7 chr2 226184090 226184393 -27072190 - AluSp SINE Alu -8 305 4 236 209 0 0 chr2 226184909 226184952 -27071631 + MER5B DNA MER1_type 7 49 -129 2446 92 0 0 chr2 226185203 226185507 -27071076 - AluSq SINE Alu -9 304 1 291 244 53 53 chr2 226186070 226186201 -27070382 - MIR SINE MIR -112 150 20 532 245 61 6 chr2 226186727 226186890 -27069693 - MIR SINE MIR -17 245 74 183 80 0 0 chr2 226187024 226187049 -27069534 + (TA)n Simple_repeat Simple_repeat 1 25 0 211 240 135 39 chr2 226187418 226187522 -27069061 - MIR SINE MIR -63 145 32 315 44 0 22 chr2 226188165 226188210 -27068373 - MADE1 DNA Mariner -36 44 1 1966 120 74 0 chr2 226189022 226189305 -27067278 + AluSx SINE Alu 2 305 -7 1112 167 35 15 chr2 226189975 226190173 -27066410 - MER20 DNA MER1_type -2 217 16 21 0 0 0 chr2 226190615 226190636 -27065947 + AT_rich Low_complexity Low_complexity 1 21 0 479 225 123 26 chr2 226190649 226190943 -27065640 - L1ME4a LINE L1 -54 6067 5619 2284 109 0 3 chr2 226191374 226191678 -27064905 + AluSx SINE Alu 1 303 -9 379 308 87 10 chr2 226191869 226192077 -27064506 - L1MC4a LINE L1 -1908 5900 5677 1857 152 41 0 chr2 226192337 226192627 -27063956 + AluSx SINE Alu 1 302 -10 2056 121 9 25 chr2 226193742 226194057 -27062526 - AluSq SINE Alu -3 310 1 304 311 161 19 chr2 226195911 226196072 -27060511 - L2 LINE L2 -16 3256 3073 21 0 0 0 chr2 226197258 226197279 -27059304 + AT_rich Low_complexity Low_complexity 1 21 0 182 319 129 0 chr2 226197658 226197774 -27058809 + L2 LINE L2 2349 2479 -835 1064 164 0 0 chr2 226197926 226198091 -27058492 + AluSg/x SINE Alu 137 301 -11 1187 211 126 39 chr2 226198179 226198543 -27058040 - MSTD LTR MaLR 0 396 1 222 118 0 0 chr2 226198619 226198653 -27057930 + (T)n Simple_repeat Simple_repeat 1 34 0 206 301 70 70 chr2 226198836 226198979 -27057604 - L2 LINE L2 -8 3264 3122 2072 114 3 42 chr2 226199082 226199390 -27057193 - AluSx SINE Alu -16 296 1 355 243 56 9 chr2 226200823 226200930 -27055653 - MIR SINE MIR -56 152 41 297 230 81 11 chr2 226203600 226203687 -27052896 - MIR SINE MIR -1 261 169 630 261 50 5 chr2 226203725 226203924 -27052659 + MIR SINE MIR 55 262 0 44061 48 3 0 chr2 226203956 226210083 -27046500 + L1PA5 LINE L1 2 6148 -6 444 37 0 0 chr2 226210296 226210350 -27046233 + (TG)n Simple_repeat Simple_repeat 2 55 0 28 0 0 0 chr2 226210627 226210655 -27045928 + AT_rich Low_complexity Low_complexity 1 28 0 609 313 48 53 chr2 226210736 226210786 -27045797 - L1ME4a LINE L1 -257 5864 5815 1881 152 13 20 chr2 226210786 226211088 -27045495 + AluJb SINE Alu 1 300 -12 609 313 48 53 chr2 226211088 226211414 -27045169 - L1ME4a LINE L1 -306 5815 5490 1690 167 35 17 chr2 226211944 226212232 -27044351 + AluJb SINE Alu 1 293 -19 830 206 24 3 chr2 226212499 226212769 -27043814 - MLT1A1 LTR MaLR 0 365 20 2326 90 6 10 chr2 226213001 226213313 -27043270 + AluSx SINE Alu 1 311 -1 1698 165 0 14 chr2 226214116 226214413 -27042170 + AluJo SINE Alu 14 306 -6 218 253 80 100 chr2 226215560 226215710 -27040873 - MIR SINE MIR -46 216 70 2463 92 0 0 chr2 226216430 226216733 -27039850 + AluSx SINE Alu 2 304 -8 2028 126 28 0 chr2 226217967 226218253 -27038330 - AluSx SINE Alu -18 294 1 23 0 0 0 chr2 226218259 226218282 -27038301 + AT_rich Low_complexity Low_complexity 1 23 0 830 287 93 28 chr2 226218429 226218516 -27038067 - L1ME2 LINE L1 -217 5947 5867 2123 67 7 11 chr2 226218516 226218786 -27037797 - AluY SINE Alu -4 307 39 830 287 93 28 chr2 226218786 226219230 -27037353 - L1ME2 LINE L1 -297 5867 5358 189 0 0 0 chr2 226219230 226219251 -27037332 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 830 287 93 28 chr2 226219251 226219380 -27037203 - L1ME2 LINE L1 -806 5358 5239 1849 159 0 25 chr2 226219381 226219695 -27036888 - AluSx SINE Alu -6 306 1 1639 187 10 3 chr2 226219732 226220026 -27036557 - AluJo SINE Alu -16 296 1 252 0 0 0 chr2 226220079 226220107 -27036476 + (A)n Simple_repeat Simple_repeat 1 28 0 2010 138 10 3 chr2 226220597 226220894 -27035689 - AluSx SINE Alu -13 299 1 317 303 134 0 chr2 226220914 226221145 -27035438 + L1ME4a LINE L1 5545 5806 -315 1937 146 4 0 chr2 226221315 226221595 -27034988 + AluSx SINE Alu 3 317 0 206 29 59 0 chr2 226221595 226221629 -27034954 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 286 228 244 0 chr2 226221635 226221762 -27034821 + L1ME4a LINE L1 5961 6118 -3 22 0 0 0 chr2 226222015 226222037 -27034546 + AT_rich Low_complexity Low_complexity 1 22 0 263 274 49 20 chr2 226222126 226222228 -27034355 + L1ME LINE L1 5566 5670 -451 320 149 75 0 chr2 226222252 226222319 -27034264 - L1MA10 LINE L1 -4 6330 6259 388 162 126 173 chr2 226222319 226222590 -27033993 - L1ME2 LINE L1 -104 6062 5805 180 111 0 0 chr2 226222600 226222627 -27033956 + (T)n Simple_repeat Simple_repeat 1 27 0 270 193 257 0 chr2 226222639 226222716 -27033867 - L1M1 LINE L1 -342 5824 5740 2075 323 56 21 chr2 226223035 226223660 -27032923 + L1MD1 LINE L1 5596 6242 0 1223 95 19 0 chr2 226224143 226224301 -27032282 - AluSg/x SINE Alu -15 295 135 30 0 0 0 chr2 226224706 226224736 -27031847 + AT_rich Low_complexity Low_complexity 1 30 0 1937 127 30 7 chr2 226224837 226225136 -27031447 - AluJb SINE Alu -6 306 1 189 287 81 44 chr2 226227256 226227392 -27029191 - MIR3 SINE MIR -60 148 8 695 197 27 7 chr2 226227823 226227970 -27028613 + AluJb SINE Alu 146 295 -17 831 134 36 130 chr2 226228209 226228307 -27028276 - AluJo SINE Alu -88 224 118 1706 169 19 7 chr2 226228307 226228615 -27027968 + AluJb SINE Alu 1 312 0 831 134 36 130 chr2 226228615 226228763 -27027820 - AluJo SINE Alu -194 118 1 975 182 0 28 chr2 226228789 226228970 -27027613 - L1MC3 LINE L1 -925 6860 6685 664 164 17 0 chr2 226230337 226230453 -27026130 + AluJb SINE Alu 191 308 -4 1804 149 38 3 chr2 226230777 226231065 -27025518 + AluJb SINE Alu 4 301 -11 223 335 84 0 chr2 226231456 226231611 -27024972 + L3 LINE CR1 1407 1574 -3 1906 146 0 10 chr2 226232172 226232474 -27024109 - AluJb SINE Alu -5 307 9 2247 117 0 3 chr2 226232484 226232791 -27023792 - AluSx SINE Alu -6 306 1 841 152 0 29 chr2 226233155 226233293 -27023290 + AluJo SINE Alu 1 134 -178 331 275 53 15 chr2 226234276 226234407 -27022176 - L2 LINE L2 0 3313 3178 819 191 110 0 chr2 226234423 226234596 -27021987 - MER58 DNA MER1_type -149 192 1 891 166 109 86 chr2 226234604 226234692 -27021891 - MER33 DNA MER1_type -2261 324 239 1892 95 36 0 chr2 226234692 226234944 -27021639 + AluSp SINE Alu 41 301 -12 891 166 109 86 chr2 226234944 226235037 -27021546 - MER33 DNA MER1_type -2346 239 150 2129 134 7 0 chr2 226235037 226235335 -27021248 + AluSx SINE Alu 1 300 -12 891 166 109 86 chr2 226235335 226235465 -27021118 - MER33 DNA MER1_type -2435 150 5 337 302 54 7 chr2 226235503 226235652 -27020931 - L2 LINE L2 -454 2860 2705 782 159 0 30 chr2 226235678 226235810 -27020773 - FLAM_C SINE Alu -14 129 2 24 0 0 0 chr2 226235812 226235836 -27020747 + AT_rich Low_complexity Low_complexity 1 24 0 29 0 0 0 chr2 226235864 226235893 -27020690 + AT_rich Low_complexity Low_complexity 1 29 0 278 279 98 39 chr2 226235905 226236242 -27020341 - L2 LINE L2 -633 2681 2325 484 302 116 0 chr2 226236256 226236471 -27020112 + LTR16A LTR ERVL 6 245 -205 738 70 20 0 chr2 226236473 226236573 -27020010 + Tigger3(Golem) DNA MER2_type 2805 2906 -123 307 342 93 6 chr2 226236624 226236785 -27019798 + LTR16A LTR ERVL 266 440 -10 193 297 166 35 chr2 226236799 226237028 -27019555 - L2 LINE L2 -997 2317 2059 2006 125 27 0 chr2 226237046 226237341 -27019242 - AluSx SINE Alu -9 303 1 531 259 94 5 chr2 226237529 226237730 -27018853 - MIR SINE MIR -16 246 28 1851 129 5 127 chr2 226238699 226239094 -27017489 + MER7A DNA MER2_type 2 346 0 2190 121 0 0 chr2 226239934 226240231 -27016352 - AluSx SINE Alu -15 297 1 2278 84 0 90 chr2 226241505 226241848 -27014735 + AluSx SINE Alu 1 312 0 539 258 20 7 chr2 226241880 226242031 -27014552 - L1M4 LINE L1 -1112 5034 4882 2234 89 3 7 chr2 226242084 226242377 -27014206 + AluSx SINE Alu 1 292 -20 535 118 0 0 chr2 226242637 226242740 -27013843 - AluSg/x SINE Alu 0 307 205 2045 167 17 60 chr2 226242746 226243166 -27013417 + MER57A LTR ERV1 2 403 0 198 0 0 0 chr2 226244743 226244765 -27011818 + (CAG)n Simple_repeat Simple_repeat 2 23 0 425 192 173 0 chr2 226244932 226245036 -27011547 + MIR3 SINE MIR 69 190 -18 271 202 170 11 chr2 226245127 226245221 -27011362 - L2 LINE L2 -7 3265 3157 3802 123 161 107 chr2 226245255 226245358 -27011225 - L1MC3 LINE L1 -2 7783 7687 2330 102 3 0 chr2 226245358 226245661 -27010922 - AluY SINE Alu -6 305 2 3802 123 161 107 chr2 226245661 226246104 -27010479 - L1MC3 LINE L1 -98 7687 7269 293 275 11 11 chr2 226246104 226246195 -27010388 - MLT1F1 LTR MaLR -442 125 35 3802 123 161 107 chr2 226246195 226246221 -27010362 - L1MC3 LINE L1 -516 7269 7246 2255 111 0 0 chr2 226246221 226246519 -27010064 + AluSg SINE Alu 1 298 -12 3802 123 161 107 chr2 226246519 226246869 -27009714 - L1MC3 LINE L1 -539 7246 6715 1354 175 111 4 chr2 226246871 226247152 -27009431 + AluJb SINE Alu 3 310 0 249 216 0 27 chr2 226247222 226247296 -27009287 - L1ME4a LINE L1 -2 6119 6048 252 274 0 0 chr2 226247489 226247551 -27009032 - MIR3 SINE MIR -3 205 144 302 320 130 0 chr2 226247738 226247838 -27008745 + MIR SINE MIR 3 115 -147 1284 185 16 24 chr2 226247849 226248098 -27008485 - AluJo SINE Alu -1 311 65 333 68 0 0 chr2 226248127 226248171 -27008412 + (A)n Simple_repeat Simple_repeat 1 44 0 314 262 39 39 chr2 226248171 226248274 -27008309 - MIR SINE MIR -148 114 12 758 147 0 0 chr2 226248465 226248574 -27008009 - AluJb SINE Alu -24 288 180 646 118 118 0 chr2 226249415 226249525 -27007058 - AluSg SINE Alu -186 124 2 295 214 205 0 chr2 226251515 226251627 -27004956 + Charlie5 DNA MER1_type 1 143 -2469 1935 143 24 3 chr2 226252704 226252997 -27003586 - AluSx SINE Alu -13 299 1 1662 171 28 14 chr2 226253026 226253313 -27003270 + AluSx SINE Alu 1 291 -21 285 186 349 0 chr2 226254170 226254256 -27002327 + MIR SINE MIR 14 129 -133 1608 162 34 27 chr2 226254385 226254681 -27001902 - AluSx SINE Alu -14 298 1 194 345 64 9 chr2 226254769 226254879 -27001704 - MIR3 SINE MIR -90 118 3 423 99 363 0 chr2 226255926 226256017 -27000566 + AluY SINE Alu 176 299 -12 306 250 57 93 chr2 226256020 226256123 -27000460 + MIR SINE MIR 19 117 -145 1920 124 31 17 chr2 226256123 226256413 -27000170 - AluSx SINE Alu -13 299 6 306 250 57 93 chr2 226256413 226256449 -27000134 + MIR SINE MIR 117 153 -109 1839 175 0 0 chr2 226256796 226257104 -26999479 - AluJb SINE Alu -2 310 3 1695 155 81 0 chr2 226257870 226258154 -26998429 - AluSx SINE Alu -5 307 1 1778 155 115 48 chr2 226258173 226258573 -26998010 - MSTA LTR MaLR -1 427 1 344 266 48 16 chr2 226258654 226258778 -26997805 - LTR33 LTR ERVL 0 521 394 632 295 104 0 chr2 226258879 226259072 -26997511 - LTR33 LTR ERVL -305 216 4 733 229 282 58 chr2 226259204 226259637 -26996946 - MLT1H LTR MaLR -8 541 12 1677 176 14 7 chr2 226259795 226260074 -26996509 - AluJb SINE Alu -31 281 1 1974 104 68 7 chr2 226260639 226260917 -26995666 + AluSx SINE Alu 3 297 -15 509 296 174 8 chr2 226261722 226261975 -26994608 + ERVL LTR ERVL 2019 2313 -3451 479 272 31 37 chr2 226262087 226262249 -26994334 + ERVL LTR ERVL 2487 2647 -3007 338 118 43 97 chr2 226262268 226262361 -26994222 + Charlie1 DNA MER1_type 2561 2648 -113 2208 102 10 7 chr2 226262361 226262654 -26993929 - AluSx SINE Alu -17 295 2 251 274 75 38 chr2 226262663 226262769 -26993814 + ERVL LTR ERVL 2697 2806 -2958 396 267 93 58 chr2 226262821 226262993 -26993590 + ERVL LTR ERVL 2932 3109 -2655 211 209 76 105 chr2 226262994 226263099 -26993484 + MIR3 SINE MIR 1 102 -106 1069 301 125 52 chr2 226263108 226263747 -26992836 + ERVL LTR ERVL 3202 3887 -1877 711 256 12 0 chr2 226263961 226264121 -26992462 + ERVL LTR ERVL 4347 4508 -1256 * 745 334 11 26 chr2 226264117 226264464 -26992119 + ERVL LTR ERVL 4681 5022 -742 1245 141 34 128 chr2 226264612 226264939 -26991644 - AluJo SINE Alu -16 296 1 329 273 0 41 chr2 226265731 226265852 -26990731 - L1MC4 LINE L1 -1339 6703 6588 184 167 42 0 chr2 226265877 226265925 -26990658 + (TA)n Simple_repeat Simple_repeat 1 50 0 459 167 67 78 chr2 226266068 226266248 -26990335 + L1M4 LINE L1 2234 2411 -3735 2044 145 0 16 chr2 226266402 226266719 -26989864 + AluJb SINE Alu 1 312 0 2038 121 7 36 chr2 226266887 226267194 -26989389 - AluSx SINE Alu -14 298 1 1963 167 0 0 chr2 226267346 226267633 -26988950 - AluJo SINE Alu -25 287 1 268 271 0 0 chr2 226268912 226268982 -26987601 - MIR SINE MIR -25 237 168 181 400 23 15 chr2 226268999 226269129 -26987454 + L2 LINE L2 2787 2917 -397 267 255 85 0 chr2 226269208 226269302 -26987281 - MIR SINE MIR -79 183 82 2359 95 0 0 chr2 226269403 226269699 -26986884 + AluSg SINE Alu 1 296 -14 1499 182 13 42 chr2 226269830 226270193 -26986390 - AluJb SINE Alu 0 312 1 256 273 94 47 chr2 226270519 226270647 -26985936 - MIR SINE MIR -79 183 50 390 191 0 0 chr2 226272322 226272385 -26984198 + AluSp SINE Alu 131 193 -110 769 275 43 39 chr2 226272525 226272783 -26983800 + MIR SINE MIR 4 262 0 209 309 54 12 chr2 226272791 226272875 -26983708 - MIR SINE MIR -62 146 69 372 232 127 58 chr2 226272909 226273125 -26983458 - MLT1I LTR MaLR -3 406 100 182 298 0 35 chr2 226273717 226273774 -26982809 - L2 LINE L2 -173 3099 3045 331 279 147 39 chr2 226274075 226274204 -26982379 + MER5A DNA MER1_type 47 189 0 21 0 0 0 chr2 226274444 226274465 -26982118 + AT_rich Low_complexity Low_complexity 1 21 0 1628 182 10 0 chr2 226274629 226274920 -26981663 - AluJo SINE Alu -18 294 1 418 273 58 8 chr2 226274923 226275044 -26981539 - MIR SINE MIR -70 192 66 1993 171 19 30 chr2 226275650 226275861 -26980722 - MLT1A1 LTR MaLR 0 365 158 2287 87 0 13 chr2 226275861 226276173 -26980410 - AluSc SINE Alu -1 308 1 1993 171 19 30 chr2 226276173 226276330 -26980253 - MLT1A1 LTR MaLR -207 158 1 282 207 138 69 chr2 226276454 226276628 -26979955 + MIR3 SINE MIR 16 201 -7 838 309 48 0 chr2 226276849 226277098 -26979485 + MIR SINE MIR 2 262 0 966 174 6 6 chr2 226277646 226277824 -26978759 - AluJo SINE Alu -101 211 34 398 210 30 66 chr2 226277838 226278005 -26978578 - L1MC4a LINE L1 -1852 5956 5796 714 55 0 0 chr2 226278032 226278089 -26978494 + (TTTCC)n Simple_repeat Simple_repeat 1 148 0 714 55 0 0 chr2 226278089 226278180 -26978403 + (TTTCC)n Simple_repeat Simple_repeat 2 92 0 1297 161 3 69 chr2 226278219 226278510 -26978073 - AluJb SINE Alu -40 272 1 356 176 1 78 chr2 226278515 226278593 -26977990 - L1P5 LINE L1 -357 5799 5730 1898 141 104 62 chr2 226278593 226279027 -26977556 - LTR47A LTR ERVL 0 452 1 356 176 1 78 chr2 226279027 226279065 -26977518 - L1P5 LINE L1 -426 5730 5691 686 254 58 55 chr2 226279110 226279178 -26977405 - L1MC4a LINE L1 -2070 5738 5672 1592 213 37 40 chr2 226279178 226279553 -26977030 + MLT1A2 LTR MaLR 1 374 0 686 254 58 55 chr2 226279553 226279775 -26976808 - L1MC4a LINE L1 -2136 5672 5447 689 259 81 4 chr2 226279791 226280038 -26976545 + MER113 DNA MER1_type? 117 382 -139 1854 166 96 55 chr2 226280171 226280586 -26975997 + LTR45B LTR ERV1 1 439 -50 1588 150 48 24 chr2 226280586 226280879 -26975704 - AluJo SINE Alu -12 300 1 1854 166 96 55 chr2 226280879 226280933 -26975650 + LTR45B LTR ERV1 439 489 0 948 190 30 0 chr2 226281162 226281362 -26975221 - L1MC2 LINE L1 -1 6343 6138 2782 140 146 145 chr2 226281363 226281730 -26974853 - L1MC3 LINE L1 -210 7575 7210 298 296 0 11 chr2 226281730 226281818 -26974765 - MLT1F1 LTR MaLR -436 131 45 2782 140 146 145 chr2 226281818 226282040 -26974543 - L1MC3 LINE L1 -575 7210 6990 2310 71 0 0 chr2 226282040 226282334 -26974249 - AluY SINE Alu -17 294 1 1493 143 12 107 chr2 226282336 226282516 -26974067 - AluJo SINE Alu -4 298 161 1836 169 0 6 chr2 226282516 226282830 -26973753 + AluJb SINE Alu 1 312 0 1493 143 12 107 chr2 226282830 226282977 -26973606 - AluJo SINE Alu -141 161 2 2782 140 146 145 chr2 226282977 226283186 -26973397 - L1MC3 LINE L1 -795 6990 6685 198 0 0 0 chr2 226283650 226283672 -26972911 + (T)n Simple_repeat Simple_repeat 1 22 0 393 250 0 86 chr2 226283808 226283936 -26972647 - MIR3 SINE MIR -38 170 54 453 307 65 46 chr2 226284095 226284336 -26972247 + MIR SINE MIR 1 243 -19 1182 217 28 57 chr2 226285138 226285456 -26971127 - MER58B DNA MER1_type 0 341 33 411 233 96 96 chr2 226285490 226285730 -26970853 + MIR SINE MIR 23 262 0 544 213 79 74 chr2 226286107 226286309 -26970274 - MIR SINE MIR -23 239 37 327 293 66 0 chr2 226286874 226286980 -26969603 + MIR3 SINE MIR 82 194 -14 943 190 40 101 chr2 226287246 226287493 -26969090 + MIR SINE MIR 31 262 0 322 241 35 11 chr2 226288429 226288603 -26967980 + (CA)n Simple_repeat Simple_repeat 1 178 0 307 192 16 50 chr2 226288586 226288768 -26967815 + (CATA)n Simple_repeat Simple_repeat 4 179 0 * 2227 112 0 0 chr2 226288872 226289184 -26967399 - AluSx SINE Alu 0 312 1 210 315 45 0 chr2 226289223 226289312 -26967271 + L2 LINE L2 2967 3059 -213 2662 116 5 10 chr2 226290195 226290584 -26965999 - MLT1B LTR MaLR -3 387 1 324 257 159 0 chr2 226290657 226290770 -26965813 + MIR SINE MIR 124 254 -8 216 97 0 0 chr2 226290790 226290821 -26965762 + (ATG)n Simple_repeat Simple_repeat 3 33 0 496 268 109 60 chr2 226291519 226291866 -26964717 + L2 LINE L2 2874 3237 -35 460 316 90 7 chr2 226292496 226292651 -26963932 - MIR3 SINE MIR -19 189 22 606 336 62 0 chr2 226292750 226292958 -26963625 - MIR SINE MIR -25 237 17 2123 109 3 0 chr2 226293031 226293325 -26963258 + AluSx SINE Alu 1 295 -17 535 245 64 0 chr2 226293735 226293882 -26962701 - MIR SINE MIR -63 145 28 284 349 83 5 chr2 226294040 226294232 -26962351 + MLT1L LTR MaLR 193 399 -216 333 296 35 14 chr2 226294402 226294544 -26962039 - MLT1L LTR MaLR -333 282 138 881 185 75 88 chr2 226294575 226294693 -26961890 - MIR SINE MIR -26 236 118 1769 155 0 30 chr2 226294693 226294793 -26961790 - AluSx SINE Alu -17 295 194 2122 85 3 44 chr2 226294793 226295112 -26961471 - AluY SINE Alu -5 306 1 1769 155 0 30 chr2 226295112 226295315 -26961268 - AluSx SINE Alu -118 194 1 1602 135 15 38 chr2 226295325 226295592 -26960991 - AluJb SINE Alu -24 288 28 881 185 75 88 chr2 226295592 226295689 -26960894 - MIR SINE MIR -153 109 13 207 382 138 9 chr2 226296287 226296852 -26959731 - L2 LINE L2 -715 2599 1962 315 309 101 7 chr2 226296915 226297064 -26959519 + L1ME4a LINE L1 5501 5663 -458 607 326 33 0 chr2 226297112 226297327 -26959256 - MIR SINE MIR -39 223 2 499 294 84 5 chr2 226297333 226297547 -26959036 + L1ME4a LINE L1 5656 5886 -235 255 31 0 0 chr2 226298462 226298494 -26958089 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 216 371 18 66 chr2 226298521 226298688 -26957895 - L2 LINE L2 -45 3227 3069 22 0 0 0 chr2 226298919 226298941 -26957642 + AT_rich Low_complexity Low_complexity 1 22 0 207 146 0 0 chr2 226299639 226299673 -26956910 - MIR SINE MIR -65 146 106 451 249 110 0 chr2 226301702 226301859 -26954724 - MIR SINE MIR -49 213 42 1057 87 7 7 chr2 226302520 226302669 -26953914 + AluJb SINE Alu 1 149 -163 380 307 44 0 chr2 226302679 226302793 -26953790 + L2 LINE L2 3192 3310 -3 739 202 0 8 chr2 226302896 226303051 -26953532 + AluSc SINE Alu 154 307 0 2253 92 3 3 chr2 226303518 226303821 -26952762 + AluSq SINE Alu 1 303 -10 203 296 61 31 chr2 226304227 226304325 -26952258 + MIR SINE MIR 20 120 -142 828 294 198 5 chr2 226304449 226304843 -26951740 + L2 LINE L2 2838 3307 -6 200 369 107 0 chr2 226304921 226305024 -26951559 - MER91A DNA MER1_type -82 114 1 255 257 264 7 chr2 226305588 226305732 -26950851 + MIR3 SINE MIR 1 181 -27 793 242 116 27 chr2 226306243 226306723 -26949860 + MLT1G1 LTR MaLR 1 591 -4 289 179 0 26 chr2 226307211 226307289 -26949294 + L1ME4a LINE L1 6046 6121 0 * 350 284 135 14 chr2 226307279 226307494 -26949089 - L1ME4a LINE L1 -73 6048 5808 241 313 0 0 chr2 226307595 226307659 -26948924 + (TATG)n Simple_repeat Simple_repeat 4 67 0 544 269 94 12 chr2 226308062 226308233 -26948350 - MIR SINE MIR -49 213 29 317 357 29 7 chr2 226309687 226309827 -26946756 + MIR3 SINE MIR 66 208 0 438 266 18 16 chr2 226309841 226310019 -26946564 + MIR SINE MIR 13 262 0 337 380 58 18 chr2 226310155 226310379 -26946204 - MIR SINE MIR -6 256 24 695 89 0 67 chr2 226310997 226311222 -26945361 + (TCCCC)n Simple_repeat Simple_repeat 1 210 0 759 173 0 15 chr2 226312017 226312150 -26944433 - FLAM_C SINE Alu 0 133 3 2106 86 4 0 chr2 226312295 226312604 -26943979 - AluY SINE Alu 0 310 1 339 360 72 0 chr2 226312604 226312757 -26943826 - L2 LINE L2 -10 3303 3140 2390 69 0 0 chr2 226312823 226313126 -26943457 + AluY SINE Alu 2 304 -7 1994 112 33 7 chr2 226313137 226313440 -26943143 + AluSp SINE Alu 1 311 -2 241 262 116 47 chr2 226313494 226313666 -26942917 + MLT1K LTR MaLR 342 525 -63 320 317 142 0 chr2 226315127 226315247 -26941336 - L2 LINE L2 0 3272 3136 518 241 59 53 chr2 226315491 226315678 -26940905 - MER5A DNA MER1_type -1 188 1 1659 101 8 17 chr2 226315988 226316225 -26940358 - LTR10A LTR ERV1 -54 555 321 1287 54 32 32 chr2 226316227 226316446 -26940137 - AluY SINE Alu 0 311 111 1066 181 135 32 chr2 226316446 226316727 -26939856 - LTR10A LTR ERV1 -299 310 1 767 285 31 35 chr2 226316736 226316996 -26939587 + MIR SINE MIR 2 260 -2 2164 262 98 55 chr2 226316997 226317603 -26938980 + L1MEd LINE L1 107 781 -5338 2306 42 0 17 chr2 226317603 226317926 -26938657 + AluY SINE Alu 1 318 0 2164 262 98 55 chr2 226317926 226318395 -26938188 + L1MEd LINE L1 781 1229 -4890 1778 159 7 0 chr2 226318395 226318691 -26937892 + AluJo SINE Alu 1 298 -14 342 244 134 31 chr2 226319751 226319878 -26936705 - L2 LINE L2 -2 3311 3172 571 357 85 31 chr2 226320027 226320450 -26936133 - L2 LINE L2 -451 2863 2418 3315 175 56 119 chr2 226320516 226321331 -26935252 + MER45B DNA AcHobo 2 750 -831 1599 154 14 24 chr2 226321331 226321623 -26934960 - AluJo SINE Alu -1 311 23 3315 175 56 119 chr2 226321623 226321767 -26934816 + MER45B DNA AcHobo 750 901 -139 1707 170 3 0 chr2 226321767 226322081 -26934502 + AluSx SINE Alu 1 315 0 3405 142 58 84 chr2 226322092 226322917 -26933666 + L1MC2 LINE L1 5541 6344 0 343 229 76 92 chr2 226323310 226323441 -26933142 + MIR3 SINE MIR 42 170 -38 473 301 102 32 chr2 226323576 226323762 -26932821 - MIR3 SINE MIR -7 201 3 314 280 155 11 chr2 226324427 226324615 -26931968 - MIR SINE MIR -43 219 11 2331 85 20 0 chr2 226324779 226325072 -26931511 + AluSp SINE Alu 1 299 -14 634 276 76 36 chr2 226325340 226325590 -26930993 + MIR SINE MIR 3 262 0 244 304 50 81 chr2 226325945 226326106 -26930477 - MIR3 SINE MIR -1 207 52 470 318 24 24 chr2 226326335 226326505 -26930078 - MIR3 SINE MIR 0 208 39 443 245 41 54 chr2 226326549 226326696 -26929887 + L2 LINE L2 2216 2360 -954 387 0 0 0 chr2 226326979 226327022 -26929561 + (CA)n Simple_repeat Simple_repeat 1 43 0 2450 78 0 0 chr2 226327167 226327462 -26929121 - AluSg SINE Alu -15 295 1 686 221 26 63 chr2 226328254 226328330 -26928253 - AluJb SINE Alu 0 358 281 1167 77 6 22 chr2 226328330 226328513 -26928070 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 686 221 26 63 chr2 226328513 226328672 -26927911 - AluJb SINE Alu -77 281 130 395 193 12 0 chr2 226329069 226329152 -26927431 - MLT1G LTR MaLR -9 581 498 631 245 14 53 chr2 226329238 226329446 -26927137 - MLT1H LTR MaLR -258 291 92 239 254 0 17 chr2 226329579 226329638 -26926945 - MIR3 SINE MIR -141 67 10 1022 156 36 84 chr2 226330275 226330500 -26926083 + MER20 DNA MER1_type 2 215 -4 1860 175 0 0 chr2 226330590 226330876 -26925707 + AluJb SINE Alu 1 286 -26 297 346 30 64 chr2 226331370 226331513 -26925070 - MIR SINE MIR -57 151 21 523 189 16 8 chr2 226331576 226331703 -26924880 + CT-rich Low_complexity Low_complexity 1 128 0 200 188 0 0 chr2 226332268 226332300 -26924283 + (TCCA)n Simple_repeat Simple_repeat 4 35 0 631 309 146 0 chr2 226332392 226332612 -26923971 + MIR SINE MIR 10 261 -1 24 0 0 0 chr2 226332782 226332806 -26923777 + AT_rich Low_complexity Low_complexity 1 24 0 180 274 32 16 chr2 226332900 226332962 -26923621 - MIR SINE MIR -48 214 152 980 74 8 0 chr2 226333088 226333209 -26923374 - AluY SINE Alu -189 122 1 2410 54 10 3 chr2 226333218 226333515 -26923068 - AluY SINE Alu -12 299 1 1512 44 122 0 chr2 226334476 226334681 -26921902 + MER30 DNA MER1_type 1 230 0 241 280 121 30 chr2 226336372 226336504 -26920079 + MIR SINE MIR 76 219 -43 289 228 0 0 chr2 226336919 226336976 -26919607 - MLT1D LTR MaLR -82 423 367 1078 158 20 20 chr2 226336976 226337178 -26919405 - MLT1B LTR MaLR 0 390 189 1069 74 0 0 chr2 226337209 226337344 -26919239 - AluSg/x SINE Alu -1 309 175 990 147 0 23 chr2 226337351 226337528 -26919055 - MLT1B LTR MaLR -217 173 1 786 240 58 47 chr2 226337538 226337866 -26918717 - MLT1D LTR MaLR -122 345 3 181 288 25 25 chr2 226337866 226337946 -26918637 - MIR SINE MIR -136 126 47 213 94 0 0 chr2 226338395 226338427 -26918156 + (TG)n Simple_repeat Simple_repeat 2 33 0 499 264 0 0 chr2 226338517 226338627 -26917956 - MER81 DNA DNA 0 114 5 1833 147 35 7 chr2 226338780 226339066 -26917517 + AluSx SINE Alu 1 294 -18 300 326 97 0 chr2 226339086 226339230 -26917353 - MLT1J LTR MaLR -18 493 336 392 229 29 0 chr2 226339298 226339403 -26917180 + LTR33A LTR ERVL 416 523 0 1767 140 57 101 chr2 226339893 226340055 -26916528 + MLT1B LTR MaLR 2 170 -220 1515 149 0 0 chr2 226340055 226340270 -26916313 + AluSc SINE Alu 87 301 -8 1767 140 57 101 chr2 226340270 226340514 -26916069 + MLT1B LTR MaLR 170 390 0 37 86 0 0 chr2 226340600 226340693 -26915890 + AT_rich Low_complexity Low_complexity 1 93 0 734 224 156 58 chr2 226340990 226341072 -26915511 - MER113 DNA MER1_type? -6 515 442 1830 161 7 0 chr2 226341072 226341378 -26915205 + AluJo SINE Alu 1 308 0 734 224 156 58 chr2 226341378 226341545 -26915038 - MER113 DNA MER1_type? -79 442 293 1516 171 65 38 chr2 226341545 226341779 -26914804 - AluSx SINE Alu -12 300 55 2348 115 3 0 chr2 226341779 226342084 -26914499 - AluSp SINE Alu -5 308 3 1516 171 65 38 chr2 226342084 226342141 -26914442 - AluSx SINE Alu -257 55 1 734 224 156 58 chr2 226342141 226342358 -26914225 - MER113 DNA MER1_type? -228 293 1 463 209 105 13 chr2 226342360 226342513 -26914070 - MIR SINE MIR -7 255 96 741 313 92 49 chr2 226342709 226343262 -26913321 + MER45C DNA AcHobo 54 630 -323 227 175 0 0 chr2 226343273 226343313 -26913270 + MER45C DNA AcHobo 914 953 0 210 214 0 0 chr2 226343534 226343576 -26913007 + MIR SINE MIR 112 153 -55 256 317 70 49 chr2 226344615 226344757 -26911826 + MIR SINE MIR 32 176 -86 253 311 92 25 chr2 226345042 226345161 -26911422 - L2 LINE L2 -2 3270 3144 2111 128 0 0 chr2 226346012 226346329 -26910254 + AluSx SINE Alu 1 317 0 237 333 31 31 chr2 226347398 226347494 -26909089 + L2 LINE L2 3150 3245 -27 255 31 0 0 chr2 226347503 226347535 -26909048 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 529 235 34 0 chr2 226347687 226347806 -26908777 + MER58B DNA MER1_type 218 340 -1 556 251 86 101 chr2 226348295 226348405 -26908178 + MLT1H1 LTR MaLR 61 171 -384 2222 103 28 0 chr2 226348405 226348696 -26907887 + AluSx SINE Alu 3 301 -11 556 251 86 101 chr2 226348696 226349088 -26907495 + MLT1H1 LTR MaLR 171 555 0 2211 70 59 11 chr2 226349291 226349577 -26907006 - AluY SINE Alu -11 300 1 571 244 169 0 chr2 226349591 226349763 -26906820 - MIR SINE MIR -14 248 48 697 207 19 101 chr2 226349842 226350019 -26906564 - MIR SINE MIR -2 260 101 2362 111 0 0 chr2 226350019 226350326 -26906257 + AluSx SINE Alu 1 307 -5 697 207 19 101 chr2 226350326 226350356 -26906227 - MIR SINE MIR -161 101 70 523 265 83 63 chr2 226350357 226350659 -26905924 - MLT1I LTR MaLR 0 409 102 269 296 0 0 chr2 226350747 226350801 -26905782 - MIR SINE MIR -195 67 14 262 292 21 111 chr2 226350845 226350989 -26905594 - MIR3 SINE MIR -43 165 35 235 301 54 0 chr2 226351010 226351103 -26905480 + MIR SINE MIR 63 160 -102 1674 163 13 36 chr2 226351665 226351971 -26904612 - AluJo SINE Alu -13 299 1 2141 116 3 7 chr2 226351983 226352285 -26904298 - AluSq SINE Alu -12 301 1 788 240 17 22 chr2 226352287 226352466 -26904117 - MIR SINE MIR -73 189 12 929 196 6 0 chr2 226353041 226353199 -26903384 + FAM SINE Alu 10 168 -17 611 291 0 5 chr2 226353236 226353425 -26903158 - L1ME LINE L1 -525 5645 5458 5596 126 57 3 chr2 226353509 226354936 -26901647 - L1PA16 LINE L1 -9 6157 4654 1226 163 0 0 chr2 226354936 226355126 -26901457 + AluSg/x SINE Alu 115 304 -6 518 223 117 59 chr2 226355131 226355257 -26901326 + L1ME3A LINE L1 5905 6022 -148 1838 170 0 35 chr2 226355257 226355575 -26901008 - AluJb SINE Alu -5 307 1 518 223 117 59 chr2 226355575 226355686 -26900897 + L1ME3A LINE L1 6022 6170 0 1027 256 31 17 chr2 226355694 226356045 -26900538 - MER113 DNA MER1_type? -134 387 32 350 241 60 0 chr2 226356270 226356353 -26900230 - L2 LINE L2 -4 3309 3222 196 368 0 0 chr2 226356352 226356420 -26900163 + MIR SINE MIR 58 125 -83 * 335 172 17 0 chr2 226356915 226356973 -26899610 - L2 LINE L2 -1 3312 3254 1333 184 31 43 chr2 226356976 226357303 -26899280 + MER33 DNA MER1_type 2 324 0 387 0 0 0 chr2 226357758 226357801 -26898782 + (TC)n Simple_repeat Simple_repeat 2 44 0 279 0 0 0 chr2 226357800 226357831 -26898752 + (TG)n Simple_repeat Simple_repeat 2 32 0 * 2194 95 0 34 chr2 226357831 226358126 -26898457 - AluSx SINE Alu -27 285 1 21 0 0 0 chr2 226358307 226358328 -26898255 + AT_rich Low_complexity Low_complexity 1 21 0 181 242 110 55 chr2 226359166 226359257 -26897326 + L2 LINE L2 3194 3289 -24 222 118 0 0 chr2 226359633 226359667 -26896916 + (CCCG)n Simple_repeat Simple_repeat 3 36 0 294 143 0 0 chr2 226359715 226359764 -26896819 + (CTG)n Simple_repeat Simple_repeat 1 49 0 25 0 0 0 chr2 226359773 226359798 -26896785 + GC_rich Low_complexity Low_complexity 1 25 0 187 328 67 25 chr2 226361440 226361559 -26895024 + L2 LINE L2 1330 1453 -1861 342 115 0 0 chr2 226363062 226363114 -26893469 + (CGGG)n Simple_repeat Simple_repeat 2 53 0 2125 128 0 13 chr2 226364068 226364373 -26892210 + AluSg SINE Alu 1 301 -9 2316 118 0 0 chr2 226364384 226364697 -26891886 + AluSq SINE Alu 1 313 0 2464 60 0 7 chr2 226364864 226365162 -26891421 - AluY SINE Alu -15 296 1 2077 107 0 70 chr2 226365169 226365497 -26891086 - AluSx SINE Alu -7 305 1 2220 132 0 0 chr2 226365794 226366104 -26890479 - AluSx SINE Alu -2 310 1 206 303 145 48 chr2 226367133 226367361 -26889222 + MIR SINE MIR 7 256 -6 232 304 87 33 chr2 226367460 226367552 -26889031 + MIR SINE MIR 51 147 -115 246 301 55 26 chr2 226367844 226367975 -26888608 + MIR SINE MIR 50 185 -23 418 331 29 3 chr2 226368480 226368787 -26887796 + LTR16C LTR ERVL 177 457 0 187 295 90 16 chr2 226369142 226369264 -26887319 + L2 LINE L2 1822 1952 -1362 2431 104 0 0 chr2 226369861 226370168 -26886415 + AluSg SINE Alu 2 308 -2 2150 141 0 7 chr2 226370435 226370741 -26885842 - AluSx SINE Alu -8 304 1 325 317 10 30 chr2 226370773 226370874 -26885709 - MIR SINE MIR -90 118 20 496 289 28 7 chr2 226370965 226371107 -26885476 + MIR SINE MIR 61 205 -57 603 239 65 43 chr2 226371149 226371333 -26885250 + MIR SINE MIR 46 233 -29 351 281 82 0 chr2 226371548 226371683 -26884900 + L2 LINE L2 3160 3305 -8 906 276 50 4 chr2 226371789 226372028 -26884555 - MIR SINE MIR -10 252 3 253 263 197 0 chr2 226372061 226372137 -26884446 + MIR SINE MIR 169 259 -3 360 283 110 41 chr2 226372335 226372480 -26884103 + L2 LINE L2 3110 3264 -8 257 254 185 15 chr2 226372595 226372725 -26883858 - L1ME4a LINE L1 -4 6117 5966 226 273 52 0 chr2 226372792 226372869 -26883714 - L1MB7 LINE L1 0 6184 6104 1544 142 73 15 chr2 226372871 226373132 -26883451 - AluJo SINE Alu -10 302 27 1946 140 4 0 chr2 226373132 226373449 -26883134 + AluSg SINE Alu 1 318 0 305 270 0 14 chr2 226373497 226373571 -26883012 - L1MB7 LINE L1 -81 6103 6031 218 291 136 19 chr2 226373660 226373763 -26882820 + MIR3 SINE MIR 1 115 -93 839 294 115 2 chr2 226374004 226374373 -26882210 + L2 LINE L2 2644 3058 -255 1776 202 47 26 chr2 226374482 226374504 -26882079 + MER39 LTR ERV1 130 150 -557 2114 126 3 3 chr2 226374504 226374798 -26881785 - AluSg SINE Alu -16 294 1 1776 202 47 26 chr2 226374798 226375224 -26881359 + MER39 LTR ERV1 150 707 0 2079 125 3 26 chr2 226375416 226375720 -26880863 + AluSq SINE Alu 1 297 -16 1289 218 42 68 chr2 226375751 226376137 -26880446 + MLT1A1 LTR MaLR 1 365 0 408 139 21 120 chr2 226376399 226376490 -26880093 + MER5A DNA MER1_type 1 99 -90 261 57 0 0 chr2 226376490 226376525 -26880058 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2143 121 4 0 chr2 226376527 226376807 -26879776 - AluSx SINE Alu -31 281 1 408 139 21 120 chr2 226376807 226376873 -26879710 + MER5A DNA MER1_type 100 188 -1 482 257 224 66 chr2 226376879 226377151 -26879432 + MER102b DNA MER1_type 4 318 -23 202 254 153 34 chr2 226377199 226377317 -26879266 - MIR SINE MIR -57 151 20 241 118 39 0 chr2 226378351 226378402 -26878181 + GA-rich Low_complexity Low_complexity 2 54 0 423 174 26 158 chr2 226378489 226378679 -26877904 + MER112 DNA MER1_type 1 165 -95 22 35 0 0 chr2 226378856 226378885 -26877698 + AT_rich Low_complexity Low_complexity 1 29 0 607 204 116 29 chr2 226378895 226379067 -26877516 - MIR SINE MIR -38 224 38 2569 141 59 7 chr2 226379102 226379563 -26877020 - MER31A LTR ERV1 0 485 1 278 134 122 12 chr2 226379716 226379798 -26876785 - MIR3 SINE MIR -2 206 116 240 283 76 22 chr2 226380214 226380306 -26876277 + L2 LINE L2 3176 3272 0 504 273 82 36 chr2 226380614 226380834 -26875749 + LTR33A LTR ERVL 61 290 -233 237 167 138 87 chr2 226380852 226380903 -26875680 - MER53 DNA DNA -8 181 134 2263 99 3 3 chr2 226380903 226381195 -26875388 - AluSx SINE Alu -20 292 1 237 167 138 87 chr2 226381195 226381220 -26875363 - MER53 DNA DNA -55 134 112 412 172 0 0 chr2 226381220 226381307 -26875276 - L1MB4 LINE L1 0 6180 6094 237 167 138 87 chr2 226381307 226381367 -26875216 - MER53 DNA DNA -77 112 37 238 252 48 68 chr2 226381495 226381598 -26874985 + LTR33A LTR ERVL 423 523 0 213 384 12 0 chr2 226382103 226382189 -26874394 - L3 LINE CR1 0 1577 1491 306 235 157 20 chr2 226382463 226382565 -26874018 + MER5C DNA MER1_type 208 323 -1 449 250 52 15 chr2 226382623 226382759 -26873824 + MIR SINE MIR 94 234 -28 2647 121 76 94 chr2 226383208 226383772 -26872811 - MER41A LTR ERV1 0 554 1 2267 120 0 0 chr2 226383827 226384126 -26872457 - AluSx SINE Alu -11 301 3 588 269 46 5 chr2 226384483 226384680 -26871903 + Charlie8 DNA MER1_type 61 265 -2152 2410 96 3 0 chr2 226384823 226385126 -26871457 + AluSq SINE Alu 1 304 -9 255 125 0 0 chr2 226385256 226385296 -26871287 + (T)n Simple_repeat Simple_repeat 1 40 0 386 351 129 31 chr2 226386318 226386930 -26869653 + L2 LINE L2 2600 3272 0 2219 142 0 0 chr2 226387144 226387455 -26869128 - AluSq SINE Alu -2 311 1 350 352 8 8 chr2 226387706 226387831 -26868752 - L2 LINE L2 -14 3258 3134 420 330 47 13 chr2 226387961 226388194 -26868389 - L2 LINE L2 -413 2901 2661 344 275 0 11 chr2 226388278 226388369 -26868214 + L2 LINE L2 3197 3286 -27 2531 71 6 33 chr2 226388684 226388812 -26867771 - THE1A LTR MaLR 0 355 225 2233 67 0 28 chr2 226388812 226389097 -26867486 - AluY SINE Alu -5 306 30 2531 71 6 33 chr2 226389097 226389333 -26867250 - THE1A LTR MaLR -130 225 1 522 281 18 6 chr2 226389336 226389503 -26867080 + MIR SINE MIR 66 234 -28 206 152 0 43 chr2 226389531 226389577 -26867006 + CT-rich Low_complexity Low_complexity 2 45 0 252 143 0 0 chr2 226389579 226389621 -26866962 + (TTA)n Simple_repeat Simple_repeat 1 42 0 2534 76 0 10 chr2 226389684 226389998 -26866585 + AluY SINE Alu 1 311 0 431 316 44 35 chr2 226391102 226391330 -26865253 - MIR SINE MIR -10 252 23 243 140 0 0 chr2 226391589 226391639 -26864944 + (TG)n Simple_repeat Simple_repeat 2 51 0 1375 73 117 0 chr2 226391727 226391933 -26864650 - MER30 DNA MER1_type 0 230 1 194 221 0 88 chr2 226393037 226393105 -26863478 - MIR SINE MIR -110 152 91 2262 119 0 3 chr2 226393290 226393592 -26862991 + AluSx SINE Alu 1 301 -11 1144 143 0 0 chr2 226393592 226393753 -26862830 + AluSg/x SINE Alu 134 294 -18 264 300 9 0 chr2 226393755 226393865 -26862718 - MER113 DNA MER1_type? -410 111 1 422 48 0 16 chr2 226394990 226395052 -26861531 + (TG)n Simple_repeat Simple_repeat 1 61 0 2367 105 7 0 chr2 226395338 226395643 -26860940 + AluSx SINE Alu 1 307 -5 2639 85 31 0 chr2 226396418 226396771 -26859812 - THE1B LTR MaLR 0 364 1 2263 84 0 29 chr2 226397365 226397703 -26858880 - AluY SINE Alu 0 311 1 648 153 0 0 chr2 226397704 226397815 -26858768 - AluJb SINE Alu -12 300 190 2488 75 3 7 chr2 226398485 226398790 -26857793 - AluSg SINE Alu -6 304 1 383 304 27 36 chr2 226399082 226399302 -26857281 - L1ME3 LINE L1 -278 5884 5667 268 311 115 16 chr2 226400025 226400147 -26856436 + MER5A DNA MER1_type 56 189 0 230 352 24 48 chr2 226400152 226400277 -26856306 - MIR3 SINE MIR -53 155 34 2005 148 0 24 chr2 226401647 226401945 -26854638 - AluSx SINE Alu -21 291 1 2527 69 0 7 chr2 226402054 226402359 -26854224 - AluSp SINE Alu -10 303 1 503 299 65 19 chr2 226404188 226404402 -26852181 - MIR SINE MIR -19 243 20 313 150 100 62 chr2 226404847 226404927 -26851656 + ORSL DNA AcHobo 1 83 -192 1219 162 11 0 chr2 226404931 226405122 -26851461 - AluJo SINE Alu -12 300 108 2126 114 26 37 chr2 226405122 226405500 -26851083 + THE1C LTR MaLR 1 374 -1 2221 128 13 0 chr2 226405500 226405806 -26850777 + AluSx SINE Alu 1 310 -2 493 163 261 0 chr2 226405808 226405961 -26850622 + ORSL DNA AcHobo 83 275 0 648 200 33 13 chr2 226406366 226406516 -26850067 + MER20 DNA MER1_type 2 154 -65 2162 119 0 7 chr2 226408410 226408735 -26847848 - AluSx SINE Alu 0 323 1 332 250 36 57 chr2 226408766 226408906 -26847677 - MIR SINE MIR -78 184 48 639 292 19 23 chr2 226410114 226410330 -26846253 + MIR SINE MIR 32 246 -16 1936 156 3 7 chr2 226410985 226411287 -26845296 - AluJo SINE Alu -11 301 1 183 224 86 0 chr2 226411604 226411662 -26844921 + MIR SINE MIR 65 127 -135 2474 80 3 0 chr2 226412561 226412862 -26843721 - AluSq SINE Alu -11 302 1 271 143 18 18 chr2 226412862 226412918 -26843665 - MER5B DNA MER1_type -113 65 10 887 270 21 17 chr2 226413193 226413434 -26843149 + MIR SINE MIR 21 262 0 326 267 11 0 chr2 226413571 226413661 -26842922 + MER5A DNA MER1_type 19 109 -80 244 301 41 0 chr2 226415471 226415544 -26841039 - MIR SINE MIR -63 199 124 406 283 27 19 chr2 226415892 226416046 -26840537 - MER5B DNA MER1_type -2 176 38 217 333 75 17 chr2 226416074 226416248 -26840335 + MIR SINE MIR 33 216 -46 212 259 141 0 chr2 226416760 226416845 -26839738 - MER5A DNA MER1_type -29 160 64 * 268 314 23 0 chr2 226416787 226416873 -26839710 + MER5A DNA MER1_type 78 165 -24 594 242 127 6 chr2 226416874 226417031 -26839552 - MER45A DNA AcHobo -1 177 2 235 318 91 23 chr2 226417108 226417284 -26839299 + MIR SINE MIR 1 188 -74 2148 99 34 3 chr2 226417327 226417619 -26838964 + AluSx SINE Alu 1 301 -11 1976 154 13 16 chr2 226417994 226418305 -26838278 - AluJo SINE Alu -2 310 1 1917 126 48 0 chr2 226418548 226418842 -26837741 + AluSx SINE Alu 1 307 0 239 231 0 31 chr2 226419139 226419204 -26837379 + GA-rich Low_complexity Low_complexity 3 65 0 309 305 178 0 chr2 226421651 226421769 -26834814 - MIR SINE MIR -45 217 79 198 118 0 0 chr2 226422186 226422220 -26834363 + (T)n Simple_repeat Simple_repeat 1 34 0 189 74 0 0 chr2 226422422 226422449 -26834134 + (CAA)n Simple_repeat Simple_repeat 2 28 0 213 94 0 0 chr2 226425604 226425636 -26830947 + (GAAA)n Simple_repeat Simple_repeat 1 32 0 219 242 20 40 chr2 226426277 226426376 -26830207 + CT-rich Low_complexity Low_complexity 5 101 0 856 173 0 0 chr2 226426988 226427121 -26829462 - FLAM_A SINE Alu 0 133 1 466 269 211 6 chr2 226427278 226427449 -26829134 - MIR SINE MIR -21 241 36 375 236 94 0 chr2 226427501 226427607 -26828976 + MER5A DNA MER1_type 74 189 0 213 297 134 80 chr2 226432175 226432451 -26824132 + L3b LINE CR1 1110 1400 -183 2621 47 0 0 chr2 226432591 226432891 -26823692 - AluY SINE Alu -11 300 1 479 134 1 53 chr2 226432928 226433273 -26823310 + AluJb SINE Alu 9 296 -16 2138 105 39 0 chr2 226434885 226435170 -26821413 + AluSg SINE Alu 1 296 -14 735 171 194 0 chr2 226435175 226435345 -26821238 - MER3 DNA MER1_type -6 203 1 223 24 0 71 chr2 226435752 226435794 -26820789 + (TTTTTG)n Simple_repeat Simple_repeat 2 40 0 342 290 50 23 chr2 226436137 226436281 -26820302 + MIR SINE MIR 1 152 -56 1309 166 9 0 chr2 226436305 226436522 -26820061 + AluJo SINE Alu 86 304 -8 1283 110 0 2 chr2 226436546 226436764 -26819819 - AluSc SINE Alu -7 302 37 273 304 26 52 chr2 226436780 226436895 -26819688 + MIR SINE MIR 108 219 -43 194 319 86 18 chr2 226437086 226437249 -26819334 - L3b LINE CR1 -134 1449 1276 407 183 0 119 chr2 226437921 226438047 -26818536 + Charlie5 DNA MER1_type 17 127 -2485 * 1957 122 34 21 chr2 226438045 226438430 -26818153 + Charlie5 DNA MER1_type 2235 2624 0 526 229 49 38 chr2 226439494 226439677 -26816906 + MIR3 SINE MIR 7 191 -17 21 0 0 0 chr2 226439984 226440005 -26816578 + AT_rich Low_complexity Low_complexity 1 21 0 193 132 19 19 chr2 226440754 226440807 -26815776 + G-rich Low_complexity Low_complexity 5 57 0 185 113 32 32 chr2 226441651 226441713 -26814870 + (TA)n Simple_repeat Simple_repeat 1 62 0 384 22 0 0 chr2 226441720 226441765 -26814818 + (TG)n Simple_repeat Simple_repeat 1 45 0 369 0 0 0 chr2 226442246 226442287 -26814296 + (TG)n Simple_repeat Simple_repeat 1 41 0 198 0 0 0 chr2 226444745 226444767 -26811816 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 207 0 0 0 chr2 226445216 226445239 -26811344 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 186 43 0 0 chr2 226446122 226446145 -26810438 + (TC)n Simple_repeat Simple_repeat 2 24 0 * 227 31 31 0 chr2 226446144 226446176 -26810407 + (TG)n Simple_repeat Simple_repeat 2 34 0 702 67 0 19 chr2 226447621 226447725 -26808858 - L1PA5 LINE L1 0 6154 6053 245 344 84 0 chr2 226447765 226447896 -26808687 + L3b LINE CR1 1399 1540 -43 22 35 0 0 chr2 226448639 226448668 -26807915 + AT_rich Low_complexity Low_complexity 1 29 0 2226 123 0 0 chr2 226449407 226449708 -26806875 - AluSg SINE Alu -9 301 1 426 274 35 0 chr2 226450494 226450607 -26805976 - MER91B DNA MER1_type -5 185 69 * 451 257 29 73 chr2 226450606 226450742 -26805841 - MER91B DNA MER1_type -60 130 1 346 386 51 0 chr2 226450891 226451088 -26805495 + L2 LINE L2 2852 3058 -214 286 302 12 0 chr2 226451130 226451216 -26805367 + MIR SINE MIR 118 204 -58 188 232 54 18 chr2 226451341 226451397 -26805186 + L2 LINE L2 3251 3308 -5 2032 159 0 3 chr2 226451404 226451706 -26804877 + AluJb SINE Alu 5 305 -7 24 0 0 0 chr2 226452216 226452240 -26804343 + AT_rich Low_complexity Low_complexity 1 24 0 2158 127 3 10 chr2 226453380 226453694 -26802889 + AluSq SINE Alu 1 312 -1 532 244 94 6 chr2 226453810 226453947 -26802636 + MIR SINE MIR 89 243 -19 2412 148 95 16 chr2 226453947 226454380 -26802203 - MLT1C LTR MaLR 0 467 1 532 244 94 6 chr2 226454380 226454402 -26802181 + MIR SINE MIR 243 262 0 2178 103 11 0 chr2 226454424 226454738 -26801845 - AluSq SINE Alu 0 317 1 446 246 33 33 chr2 226454814 226454936 -26801647 + L2 LINE L2 3191 3312 -1 625 304 70 13 chr2 226456611 226456841 -26799742 - MIR SINE MIR -5 257 15 2260 169 27 93 chr2 226457049 226457561 -26799022 + MLT2B2 LTR ERVL 1 476 -39 414 94 0 0 chr2 226457561 226457625 -26798958 + (TCCA)n Simple_repeat Simple_repeat 2 65 0 2260 169 27 93 chr2 226457625 226457663 -26798920 + MLT2B2 LTR ERVL 476 515 0 4614 150 18 8 chr2 226458971 226459822 -26796761 - L1MB7 LINE L1 0 6184 5326 615 124 0 0 chr2 226459822 226459911 -26796672 - AluSg/x SINE Alu -7 305 217 581 165 0 0 chr2 226459911 226460008 -26796575 - MER3 DNA MER1_type -104 105 9 241 163 0 0 chr2 226461127 226461176 -26795407 + (TG)n Simple_repeat Simple_repeat 2 50 0 285 100 0 0 chr2 226461526 226461576 -26795007 + (T)n Simple_repeat Simple_repeat 1 50 0 232 260 114 24 chr2 226461910 226462032 -26794551 + MIR SINE MIR 20 150 -65 231 204 20 0 chr2 226462636 226462685 -26793898 + MLT1K LTR MaLR 529 578 -10 186 270 54 27 chr2 226462854 226462920 -26793663 - L3b LINE CR1 -184 1399 1329 2236 126 0 0 chr2 226462920 226463230 -26793353 - AluSq SINE Alu -3 310 1 409 208 28 0 chr2 226464671 226464777 -26791806 - MER53 DNA DNA -5 184 76 1098 132 0 0 chr2 226464779 226464931 -26791652 - AluSq SINE Alu -12 301 150 347 143 100 0 chr2 226464931 226465001 -26791582 - MER53 DNA DNA -112 77 1 2316 99 7 0 chr2 226465711 226466005 -26790578 + AluSc SINE Alu 1 296 -13 245 108 27 0 chr2 226466654 226466691 -26789892 + MIR SINE MIR 107 144 -118 248 254 0 28 chr2 226467228 226467299 -26789284 + GA-rich Low_complexity Low_complexity 2 70 0 530 286 25 19 chr2 226467866 226468027 -26788556 + MIR SINE MIR 4 165 -97 277 271 112 71 chr2 226468549 226468669 -26787914 - MIR SINE MIR -14 248 118 2377 99 0 3 chr2 226468669 226468971 -26787612 - AluSq SINE Alu -12 301 1 277 271 112 71 chr2 226468971 226469020 -26787563 - MIR SINE MIR -144 118 72 205 330 101 18 chr2 226469389 226469498 -26787085 + L2 LINE L2 3137 3254 -18 409 286 89 28 chr2 226469512 226469725 -26786858 - MIR SINE MIR 0 262 19 1969 200 70 29 chr2 226470185 226470670 -26785913 - MLT1D LTR MaLR 0 505 1 440 311 40 54 chr2 226470799 226470982 -26785601 - MIR SINE MIR -67 141 3 2266 208 69 10 chr2 226470987 226471497 -26785086 + MLT1F LTR MaLR 3 542 0 283 236 140 0 chr2 226472020 226472101 -26784482 - MIR SINE MIR -67 141 51 286 271 106 59 chr2 226472198 226472368 -26784215 - MIR SINE MIR -64 198 21 201 325 129 31 chr2 226473108 226473271 -26783312 - L3b LINE CR1 -125 1458 1280 292 279 57 41 chr2 226473500 226473622 -26782961 + MIR3 SINE MIR 33 156 -52 731 265 226 27 chr2 226473624 226474134 -26782449 - L2 LINE L2 -1 3312 2694 2117 130 3 0 chr2 226474663 226474964 -26781619 + AluSx SINE Alu 5 306 -6 245 333 11 0 chr2 226474989 226475076 -26781507 - MIR SINE MIR -152 110 23 230 318 128 20 chr2 226475188 226475336 -26781247 - L2 LINE L2 -219 3053 2890 365 360 71 14 chr2 226476069 226476280 -26780303 - L3b LINE CR1 -68 1515 1293 834 279 35 13 chr2 226476615 226476841 -26779742 - MIR SINE MIR 0 262 32 2193 104 0 0 chr2 226476866 226477175 -26779408 + AluY SINE Alu 1 309 -2 401 254 127 22 chr2 226477389 226477570 -26779013 + MIR3 SINE MIR 3 202 -6 435 281 119 51 chr2 226477856 226478091 -26778492 - MLT1K LTR MaLR 0 588 338 790 234 36 0 chr2 226478154 226478321 -26778262 - MER45A DNA AcHobo 0 178 6 235 364 73 13 chr2 226478406 226478557 -26778026 - MLT1K LTR MaLR -354 234 75 217 366 39 33 chr2 226478798 226478951 -26777632 + MIR SINE MIR 59 212 -50 2030 106 0 0 chr2 226479011 226479286 -26777297 - AluSx SINE Alu -37 275 1 278 266 35 84 chr2 226480463 226480606 -26775977 - L2 LINE L2 -164 3108 2973 295 208 92 123 chr2 226480640 226480770 -26775813 + L2 LINE L2 3164 3289 -24 303 278 61 61 chr2 226480842 226481054 -26775529 + L2 LINE L2 2843 3054 -218 814 188 68 0 chr2 226481151 226481327 -26775256 + MER53 DNA DNA 2 189 0 596 204 39 97 chr2 226481832 226482036 -26774547 - MIR SINE MIR -65 197 8 330 289 11 11 chr2 226482689 226482779 -26773804 - MIR3 SINE MIR -41 167 78 195 302 57 94 chr2 226483003 226483195 -26773388 + L3 LINE CR1 1390 1574 -3 222 342 76 0 chr2 226483479 226483558 -26773025 - L2 LINE L2 -3 3269 3185 286 257 63 63 chr2 226483603 226483748 -26772835 - MIR SINE MIR -65 143 4 260 244 37 0 chr2 226483795 226483877 -26772706 + L1ME4a LINE L1 5997 6081 -40 269 303 124 60 chr2 226483893 226484127 -26772456 + L2 LINE L2 2266 2514 -800 1872 122 14 0 chr2 226484229 226484507 -26772076 - AluSq SINE Alu -31 282 1 2203 75 4 0 chr2 226484613 226484920 -26771663 + AluY SINE Alu 1 308 0 2359 160 56 40 chr2 226485125 226485624 -26770959 + Charlie1b DNA MER1_type 17 523 0 318 326 27 43 chr2 226485809 226485993 -26770590 + MLT1L LTR MaLR 420 600 -15 266 150 0 33 chr2 226486729 226486789 -26769794 + (TCCC)n Simple_repeat Simple_repeat 3 60 0 560 188 20 13 chr2 226486793 226486942 -26769641 + T-rich Low_complexity Low_complexity 3 152 0 180 111 0 0 chr2 226487200 226487227 -26769356 + (T)n Simple_repeat Simple_repeat 1 27 0 538 268 71 27 chr2 226487958 226488141 -26768442 - L2 LINE L2 -2 3311 3121 314 310 27 32 chr2 226488566 226488753 -26767830 - LTR67 LTR ERVL -14 543 358 356 311 25 25 chr2 226489301 226489423 -26767160 + L2 LINE L2 3192 3313 0 761 262 75 0 chr2 226489499 226489686 -26766897 - MIR SINE MIR -6 256 56 565 276 69 25 chr2 226491364 226491567 -26765016 + MIR SINE MIR 1 212 -50 210 284 0 15 chr2 226491568 226491635 -26764948 + (TAA)n Simple_repeat Simple_repeat 1 66 0 640 218 142 24 chr2 226491670 226491881 -26764702 - MER106A DNA MER1_type 0 236 1 329 254 59 34 chr2 226492448 226492566 -26764017 + MER91C DNA MER1_type 1 121 -19 2118 123 0 3 chr2 226492695 226493005 -26763578 - AluSq SINE Alu -4 309 1 192 111 0 0 chr2 226493486 226493513 -26763070 + MIR3 SINE MIR 170 196 -12 320 346 32 27 chr2 226493999 226494184 -26762399 + MIR3 SINE MIR 17 202 -6 590 283 54 0 chr2 226495731 226495915 -26760668 + L1PB1 LINE L1 6 199 -6664 * 15308 190 23 14 chr2 226495912 226501909 -26754674 + L1PB1 LINE L1 652 6866 -1 371 281 105 26 chr2 226501986 226502139 -26754444 + L1ME4a LINE L1 5831 5995 -126 993 268 45 0 chr2 226503243 226503486 -26753097 - MIR SINE MIR -3 259 6 552 240 162 41 chr2 226505268 226505653 -26750930 - MLT1J2 LTR MaLR -19 421 1 336 266 108 22 chr2 226505816 226505955 -26750628 + MIR SINE MIR 79 229 -33 223 355 77 44 chr2 226506010 226506258 -26750325 - L2 LINE L2 -49 3223 2968 1099 215 98 40 chr2 226507003 226507328 -26749255 + MLT1I LTR MaLR 66 409 0 221 273 117 13 chr2 226507972 226508049 -26748534 - L2 LINE L2 -2 3270 3186 2267 103 3 0 chr2 226509190 226509501 -26747082 - AluSx SINE Alu 0 312 1 358 362 7 22 chr2 226510163 226510301 -26746282 + L1MC4a LINE L1 5704 5839 -1969 1630 196 82 28 chr2 226510394 226510816 -26745767 - MER31B LTR ERV1 -22 521 1 356 180 67 0 chr2 226510916 226511005 -26745578 + L1ME4a LINE L1 6022 6116 -5 803 120 0 40 chr2 226511533 226511683 -26744900 + L1MA4 LINE L1 6157 6300 0 1155 167 13 50 chr2 226512013 226512252 -26744331 - AluJo SINE Alu -12 300 71 657 142 0 17 chr2 226512518 226512638 -26743945 - L1MA4 LINE L1 0 6300 6183 264 30 0 0 chr2 226513111 226513144 -26743439 + (TG)n Simple_repeat Simple_repeat 1 33 0 1810 201 31 63 chr2 226514064 226514552 -26742031 - MLT1D LTR MaLR -33 472 1 2930 183 54 2 chr2 226514750 226515363 -26741220 + L1MD1 LINE L1 5598 6242 0 2595 138 9 7 chr2 226517798 226518219 -26738364 + L1MB8 LINE L1 5486 5907 -277 873 129 0 0 chr2 226518238 226518370 -26738213 + AluSg/x SINE Alu 176 307 -5 636 184 45 94 chr2 226518372 226518595 -26737988 + L1MB8 LINE L1 5967 6178 0 285 307 40 35 chr2 226518653 226518855 -26737728 - L2 LINE L2 -218 3054 2852 222 364 56 10 chr2 226519121 226519316 -26737267 + L2 LINE L2 2824 3027 -245 341 258 0 8 chr2 226520875 226521007 -26735576 + (TCCA)n Simple_repeat Simple_repeat 1 131 0 1089 152 0 0 chr2 226521066 226521230 -26735353 - AluJ SINE Alu -12 300 137 438 79 0 0 chr2 226521328 226521391 -26735192 + (TTCC)n Simple_repeat Simple_repeat 4 66 0 1664 148 7 4 chr2 226521395 226521666 -26734917 - AluSx SINE Alu -38 274 3 1024 113 0 0 chr2 226521669 226521810 -26734773 - AluJ SINE Alu -171 141 1 243 246 85 23 chr2 226521923 226522053 -26734530 - L1MC4a LINE L1 -1829 5979 5842 1360 155 79 58 chr2 226522071 226522349 -26734234 + AluJb SINE Alu 1 284 -28 348 24 0 0 chr2 226522349 226522390 -26734193 + (CA)n Simple_repeat Simple_repeat 2 42 0 564 244 133 11 chr2 226522523 226522703 -26733880 - MIR SINE MIR -51 211 10 205 163 47 0 chr2 226523598 226523641 -26732942 - L2 LINE L2 -11 3302 3258 306 290 16 8 chr2 226524774 226524898 -26731685 + L3b LINE CR1 1102 1226 -357 772 193 7 0 chr2 226525258 226525393 -26731190 - FRAM SINE Alu -39 137 2 571 263 30 66 chr2 226525513 226525711 -26730872 - MIR SINE MIR -44 218 28 189 147 0 0 chr2 226526752 226526786 -26729797 + (TC)n Simple_repeat Simple_repeat 2 35 0 358 181 165 31 chr2 226526819 226526946 -26729637 + L1MC4a LINE L1 5789 5932 -1876 22 35 0 0 chr2 226527091 226527120 -26729463 + AT_rich Low_complexity Low_complexity 1 29 0 428 320 38 0 chr2 226527183 226527316 -26729267 + MIR SINE MIR 40 176 -67 1418 270 121 8 chr2 226527840 226528345 -26728238 - MLT1G3 LTR MaLR -25 535 1 518 57 14 0 chr2 226528388 226528458 -26728125 + MER41A LTR ERV1 396 466 -88 222 37 0 0 chr2 226528460 226528487 -26728096 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 348 288 30 61 chr2 226528487 226528619 -26727964 - L2 LINE L2 -13 3259 3132 6488 101 60 7 chr2 226528723 226529736 -26726847 - L1MA3 LINE L1 0 6305 5240 223 226 0 24 chr2 226530967 226531051 -26725532 + C-rich Low_complexity Low_complexity 4 85 0 946 98 5 33 chr2 226531051 226531235 -26725348 + (TCCCC)n Simple_repeat Simple_repeat 1 179 0 1573 159 4 0 chr2 226531257 226531521 -26725062 - AluJo SINE Alu -38 274 10 681 255 27 87 chr2 226532248 226532368 -26724215 + L2 LINE L2 2944 3070 -243 1952 94 0 59 chr2 226532368 226532675 -26723908 - AluSx SINE Alu -2 310 22 681 255 27 87 chr2 226532675 226532852 -26723731 + L2 LINE L2 3070 3223 -90 1942 189 107 5 chr2 226532880 226533299 -26723284 - MLT1C LTR MaLR -5 462 1 1977 123 3 20 chr2 226533961 226534263 -26722320 - AluSx SINE Alu 0 312 16 1129 204 77 63 chr2 226534746 226535124 -26721459 - MLT1C LTR MaLR 0 467 85 2290 88 0 0 chr2 226535124 226535600 -26720983 - AluSx SINE Alu 0 476 1 567 167 10 0 chr2 226536056 226536152 -26720431 - MLT1C LTR MaLR -370 97 1 232 349 105 14 chr2 226536309 226536528 -26720055 - MIR SINE MIR -6 256 20 182 170 0 132 chr2 226536976 226537029 -26719554 + L3 LINE CR1 1386 1431 -146 * 380 303 111 6 chr2 226537000 226537162 -26719421 + MIR SINE MIR 13 191 -71 1554 226 40 0 chr2 226537307 226537634 -26718949 + MER58B DNA MER1_type 2 341 0 1717 170 0 35 chr2 226538647 226538958 -26717625 + AluJo SINE Alu 1 300 -12 1276 193 0 0 chr2 226539040 226539252 -26717331 - MER58A DNA MER1_type -12 212 1 327 164 0 0 chr2 226539930 226539991 -26716592 + A-rich Low_complexity Low_complexity 1 61 0 324 276 24 57 chr2 226540118 226540241 -26716342 - MLT1K LTR MaLR 0 588 470 1939 121 0 3 chr2 226540860 226541190 -26715393 + AluSc SINE Alu 1 329 0 429 150 50 0 chr2 226541321 226541401 -26715182 - L1MC2 LINE L1 0 6344 6261 448 286 0 8 chr2 226541465 226541584 -26714999 - MIR SINE MIR -85 177 60 678 267 105 12 chr2 226542821 226543079 -26713504 - MLT1H LTR MaLR -196 353 72 511 131 131 0 chr2 226543400 226543484 -26713099 - 5S rRNA rRNA -26 95 1 1011 129 43 0 chr2 226544048 226544211 -26712372 + L1MA4 LINE L1 5617 5786 -517 2175 104 0 28 chr2 226544211 226544529 -26712054 + AluY SINE Alu 1 309 -2 368 158 13 0 chr2 226544535 226544611 -26711972 + (TA)n Simple_repeat Simple_repeat 1 77 0 281 59 0 0 chr2 226544611 226544645 -26711938 + MADE1 DNA Mariner 3 36 -44 2788 152 37 6 chr2 226544645 226545158 -26711425 + L1MA4 LINE L1 5768 6296 -4 2135 121 0 3 chr2 226545164 226545477 -26711106 + AluSq SINE Alu 1 312 -1 242 258 152 60 chr2 226546216 226546367 -26710216 - MLT1K LTR MaLR -206 382 218 442 275 8 8 chr2 226546584 226546704 -26709879 + MLT1L LTR MaLR 142 261 -354 582 249 88 51 chr2 226546749 226546960 -26709623 + MLT1L LTR MaLR 342 561 -49 977 171 55 22 chr2 226546960 226547141 -26709442 + MER5A DNA MER1_type 1 187 -2 185 221 118 44 chr2 226547235 226547303 -26709280 - MIR3 SINE MIR -27 181 109 1037 112 0 20 chr2 226547544 226547696 -26708887 + AluSg SINE Alu 1 149 -161 1522 190 125 63 chr2 226547697 226548128 -26708455 + MLT1D LTR MaLR 45 502 -3 614 304 103 12 chr2 226548129 226548382 -26708201 - LTR33 LTR ERVL -225 296 21 270 56 0 0 chr2 226549820 226549856 -26706727 + (TG)n Simple_repeat Simple_repeat 1 36 0 196 238 0 0 chr2 226551344 226551386 -26705197 + MIR3 SINE MIR 164 205 -3 258 250 62 25 chr2 226551827 226551907 -26704676 - MIR SINE MIR -58 150 68 25 31 0 0 chr2 226553762 226553794 -26702789 + GC_rich Low_complexity Low_complexity 1 32 0 210 327 33 8 chr2 226554030 226554167 -26702416 + MIR SINE MIR 23 186 -76 1106 122 0 6 chr2 226554255 226554436 -26702147 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 337 286 84 13 chr2 226554867 226555021 -26701562 + MIR SINE MIR 63 227 -35 2268 84 0 0 chr2 226556072 226556368 -26700215 - AluSc SINE Alu -13 296 1 498 249 40 57 chr2 226556587 226556764 -26699819 - MER5A DNA MER1_type 0 189 16 862 122 0 50 chr2 226557356 226557495 -26699088 - FLAM_C SINE Alu -1 132 1 479 232 54 43 chr2 226557544 226557729 -26698854 - MER5A DNA MER1_type -2 187 1 253 217 261 36 chr2 226558230 226558368 -26698215 + MIR SINE MIR 89 257 -5 231 146 0 0 chr2 226558368 226558409 -26698174 + (CA)n Simple_repeat Simple_repeat 1 41 0 371 326 23 0 chr2 226558444 226558619 -26697964 + (CA)n Simple_repeat Simple_repeat 1 179 0 304 326 6 11 chr2 226558701 226558879 -26697704 + (CA)n Simple_repeat Simple_repeat 2 178 0 473 226 0 63 chr2 226558898 226559088 -26697495 + (CA)n Simple_repeat Simple_repeat 1 178 0 512 234 0 43 chr2 226559106 226559294 -26697289 + (CA)n Simple_repeat Simple_repeat 1 180 0 272 265 111 17 chr2 226559633 226559750 -26696833 - MIR SINE MIR -29 233 106 209 311 9 66 chr2 226560874 226560932 -26695651 - L2 LINE L2 -15 3298 3238 2851 117 20 78 chr2 226560932 226561316 -26695267 + L1MA7 LINE L1 5769 6113 -178 2142 70 7 30 chr2 226561316 226561615 -26694968 - AluY SINE Alu -19 292 1 2851 117 20 78 chr2 226561615 226561785 -26694798 + L1MA7 LINE L1 6113 6291 0 1635 144 0 44 chr2 226561789 226562087 -26694496 + AluJb SINE Alu 1 285 -27 209 311 9 66 chr2 226562087 226562129 -26694454 - L2 LINE L2 -78 3235 3199 1900 85 0 4 chr2 226562358 226562604 -26693979 + AluSg SINE Alu 52 296 -14 1040 196 50 0 chr2 226562739 226562938 -26693645 + MER3 DNA MER1_type 1 209 0 1726 209 103 5 chr2 226563037 226563462 -26693121 - MLT1C LTR MaLR 0 467 1 248 369 54 0 chr2 226563584 226563714 -26692869 - MIR SINE MIR -68 194 58 261 328 16 69 chr2 226563864 226564053 -26692530 + MIR3 SINE MIR 6 184 -24 2360 93 0 0 chr2 226564214 226564527 -26692056 + AluSq SINE Alu 1 313 0 759 158 133 6 chr2 226565384 226565549 -26691034 + MER53 DNA DNA 1 186 -3 474 325 48 18 chr2 226565717 226565945 -26690638 + LTR16C LTR ERVL 168 402 -89 294 213 126 47 chr2 226565995 226566122 -26690461 + LTR16C LTR ERVL 353 489 -2 246 281 56 0 chr2 226566180 226566269 -26690314 - MIR3 SINE MIR -4 204 111 236 205 0 0 chr2 226566354 226566393 -26690190 + L2 LINE L2 3217 3255 -17 567 345 81 0 chr2 226567057 226567266 -26689317 + ERVL LTR ERVL 2722 2947 -2049 354 331 113 39 chr2 226567272 226567653 -26688930 + ERVL LTR ERVL 4969 5377 -387 335 361 52 42 chr2 226568019 226568349 -26688234 + LTR16C LTR ERVL 156 488 -3 271 269 0 15 chr2 226568365 226568432 -26688151 + MIR SINE MIR 60 125 -137 1079 262 25 37 chr2 226568548 226569030 -26687553 - LTR33 LTR ERVL 0 521 5 465 261 35 7 chr2 226570151 226570293 -26686290 + MER103 DNA DNA 13 158 -8 2058 157 28 6 chr2 226570449 226570806 -26685777 + MLT1A1 LTR MaLR 1 365 0 326 225 12 25 chr2 226571428 226571508 -26685075 - MER116 DNA Mariner 0 80 2 261 0 0 0 chr2 226571546 226571575 -26685008 + (TA)n Simple_repeat Simple_repeat 1 29 0 * 450 0 0 0 chr2 226571574 226571624 -26684959 + (GA)n Simple_repeat Simple_repeat 2 51 0 360 244 163 7 chr2 226572221 226572356 -26684227 - MIR SINE MIR -74 188 33 420 242 83 23 chr2 226572505 226572637 -26683946 - Charlie8 DNA MER1_type -2152 265 126 332 192 164 0 chr2 226572640 226572713 -26683870 - L2 LINE L2 -8 3305 3221 621 256 15 0 chr2 226572717 226572850 -26683733 - Charlie8 DNA MER1_type -2280 137 3 1981 138 3 0 chr2 226572871 226573169 -26683414 - AluSx SINE Alu -13 299 1 899 135 0 0 chr2 226573181 226573314 -26683269 - AluSq/x SINE Alu -179 133 1 346 237 68 68 chr2 226573392 226573569 -26683014 + Charlie7 DNA MER1_type 2432 2608 -4 1868 168 0 9 chr2 226573577 226573892 -26682691 + AluJb SINE Alu 1 312 0 416 325 44 6 chr2 226574254 226574414 -26682169 + L3b LINE CR1 1212 1377 -206 208 256 116 96 chr2 226574477 226574676 -26681907 + MIR3 SINE MIR 2 204 -4 1115 317 23 21 chr2 226574754 226575183 -26681400 - MLT1J1 LTR MaLR -16 430 1 267 306 81 50 chr2 226575346 226575506 -26681077 + MIR SINE MIR 22 186 -76 511 286 56 19 chr2 226575745 226575906 -26680677 + MIR3 SINE MIR 41 207 -1 850 302 138 45 chr2 226575958 226576877 -26679706 + L2 LINE L2 2288 3313 0 653 295 55 2 chr2 226577510 226577719 -26678864 - MIR SINE MIR -14 248 25 212 326 42 42 chr2 226578244 226578339 -26678244 - MIR SINE MIR -12 250 156 2014 136 101 25 chr2 226578345 226578713 -26677870 + MER61B LTR ERV1 1 396 -29 254 338 0 38 chr2 226578743 226578823 -26677760 - MIR SINE MIR -116 92 16 677 316 34 0 chr2 226579074 226579280 -26677303 - MIR SINE MIR -48 214 2 277 311 22 0 chr2 226579294 226579384 -26677199 - MIR SINE MIR -60 148 57 471 293 22 2 chr2 226579889 226580055 -26676528 + MER5A DNA MER1_type 4 187 -2 596 153 8 0 chr2 226581649 226581767 -26674816 + L1MA7 LINE L1 6173 6291 0 1442 206 68 6 chr2 226581879 226582200 -26674383 - MER58B DNA MER1_type 0 341 1 1765 122 3 61 chr2 226582301 226582612 -26673971 - AluSx SINE Alu -19 293 1 453 284 43 9 chr2 226582613 226582729 -26673854 - L2 LINE L2 0 3313 3194 330 289 84 0 chr2 226584089 226584172 -26672411 - L2 LINE L2 0 3313 3224 345 293 50 10 chr2 226584212 226584311 -26672272 - MIR SINE MIR -58 150 48 420 277 27 9 chr2 226584472 226584584 -26671999 - MIR SINE MIR -64 144 31 1290 146 9 13 chr2 226585512 226585738 -26670845 - AluJo SINE Alu -1 311 87 298 299 137 70 chr2 226586003 226586347 -26670236 - L2 LINE L2 0 3313 2947 669 227 99 111 chr2 226586347 226586854 -26669729 - MLT1F1 LTR MaLR -27 540 40 273 272 146 44 chr2 226586903 226587061 -26669522 - L2 LINE L2 -373 2941 2768 1668 168 0 3 chr2 226587076 226587362 -26669221 - AluJo SINE Alu -27 285 1 231 350 106 0 chr2 226587917 226588040 -26668543 + L2 LINE L2 3129 3264 -8 216 0 0 0 chr2 226588734 226588758 -26667825 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1425 161 45 28 chr2 226588762 226589048 -26667535 - AluJb SINE Alu -21 291 1 846 260 35 8 chr2 226589106 226589360 -26667223 - MIR SINE MIR 0 262 2 229 289 18 97 chr2 226589687 226589801 -26666782 - L2 LINE L2 -1 3312 3208 1489 204 78 43 chr2 226590106 226590552 -26666031 - MLT1C LTR MaLR 0 467 6 317 282 12 0 chr2 226590561 226590646 -26665937 - MER117 DNA MER1_type -110 87 2 934 273 90 30 chr2 226590799 226591232 -26665351 - LTR33 LTR ERVL 0 521 63 372 252 16 55 chr2 226591326 226591453 -26665130 - MIR3 SINE MIR -3 205 84 22 35 0 0 chr2 226592165 226592194 -26664389 + AT_rich Low_complexity Low_complexity 1 29 0 497 310 23 29 chr2 226593263 226593437 -26663146 - MIR3 SINE MIR -11 197 25 1346 264 67 55 chr2 226593437 226593944 -26662639 - MLT1E LTR MaLR -2 591 79 493 318 38 49 chr2 226594477 226594623 -26661960 + L1M4 LINE L1 4081 4227 -1919 1849 206 43 0 chr2 226594623 226594997 -26661586 - MLT1B LTR MaLR 0 390 1 493 318 38 49 chr2 226594997 226595172 -26661411 + L1M4 LINE L1 4227 4397 -1749 226 216 20 0 chr2 226595871 226595922 -26660661 + (CA)n Simple_repeat Simple_repeat 2 53 0 235 253 0 60 chr2 226595970 226596053 -26660530 - L1MC/D LINE L1 -1897 5911 5834 1016 166 0 11 chr2 226596327 226596508 -26660075 + AluSg/x SINE Alu 134 312 0 1016 188 55 128 chr2 226596548 226596931 -26659652 - MLT1A2 LTR MaLR -19 355 1 1935 152 0 9 chr2 226596969 226597284 -26659299 - AluSx SINE Alu 0 312 1 24 0 0 0 chr2 226597317 226597341 -26659242 + AT_rich Low_complexity Low_complexity 1 24 0 278 0 54 0 chr2 226598461 226598498 -26658085 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 204 295 66 16 chr2 226598500 226598561 -26658022 - MIR3 SINE MIR -135 73 10 209 265 60 12 chr2 226598569 226598652 -26657931 + MIR3 SINE MIR 115 201 -7 426 257 29 0 chr2 226598706 226598811 -26657772 - L2 LINE L2 -1 3312 3205 314 376 67 33 chr2 226600356 226600566 -26656017 - MIR SINE MIR -6 256 40 254 343 49 20 chr2 226600861 226600963 -26655620 + MIR SINE MIR 37 141 -67 531 278 170 9 chr2 226600970 226601193 -26655390 + MIR SINE MIR 4 262 0 237 33 0 0 chr2 226601308 226601338 -26655245 + (TG)n Simple_repeat Simple_repeat 1 30 0 1053 244 30 10 chr2 226601860 226602163 -26654420 - MER33 DNA MER1_type -11 313 5 1885 139 4 0 chr2 226603296 226603608 -26652975 + AluSx SINE Alu 1 313 0 540 229 188 0 chr2 226603810 226603954 -26652629 + MER5A DNA MER1_type 18 188 -1 210 268 54 0 chr2 226604439 226604495 -26652088 - MIR3 SINE MIR -43 165 107 426 318 74 11 chr2 226604760 226604936 -26651647 - MIR SINE MIR -74 188 2 422 297 65 7 chr2 226606617 226606772 -26649811 + LTR33 LTR ERVL 1 164 -357 757 238 66 6 chr2 226610404 226610585 -26645998 - MER20 DNA MER1_type 0 219 28 275 331 89 0 chr2 226610645 226610769 -26645814 - L2 LINE L2 -4 3268 3134 264 312 154 55 chr2 226611015 226611326 -26645257 - L2 LINE L2 -697 2617 2276 2023 127 3 0 chr2 226611386 226611685 -26644898 - AluSx SINE Alu -9 303 4 272 270 48 56 chr2 226612091 226612217 -26644366 + L2 LINE L2 3144 3268 -4 282 314 0 0 chr2 226612485 226612555 -26644028 + MIR3 SINE MIR 103 172 -36 247 300 88 0 chr2 226612587 226612667 -26643916 + L2 LINE L2 3174 3260 -12 211 250 164 29 chr2 226615289 226615393 -26641190 - MIR SINE MIR -66 142 25 2185 144 50 17 chr2 226616603 226616963 -26639620 - MER83B LTR ERV1 -6 372 1 700 197 51 51 chr2 226616992 226617170 -26639413 - MER45A DNA AcHobo 0 178 1 228 364 36 18 chr2 226618025 226618135 -26638448 - MIR3 SINE MIR -88 120 9 257 325 128 35 chr2 226618362 226618738 -26637845 - L2 LINE L2 -841 2473 2063 567 172 8 8 chr2 226619889 226620011 -26636572 + L1MA10 LINE L1 6211 6332 -2 184 275 72 58 chr2 226623362 226623431 -26633152 - MIR SINE MIR -93 115 46 577 254 124 70 chr2 226624099 226624414 -26632169 + MER102b DNA MER1_type 10 341 0 595 324 60 14 chr2 226625257 226625538 -26631045 - LTR16C LTR ERVL -31 460 167 242 294 171 12 chr2 226625671 226625923 -26630660 - L1ME LINE L1 -308 5813 5522 204 344 32 21 chr2 226625949 226626042 -26630541 + L3b LINE CR1 1406 1499 -84 1420 94 5 15 chr2 226626846 226627048 -26629535 + L1PA8 LINE L1 5969 6168 -4 304 286 24 0 chr2 226627556 226627640 -26628943 + L2 LINE L2 3228 3313 0 1285 213 225 26 chr2 226628091 226628594 -26627989 + LTR50 LTR ERVL 193 795 0 323 312 36 22 chr2 226630951 226631089 -26625494 + MIR3 SINE MIR 9 148 -60 182 191 162 44 chr2 226631912 226631929 -26624654 - MIR3 SINE MIR -25 183 169 2106 126 10 3 chr2 226631929 226632239 -26624344 + AluSx SINE Alu 1 312 0 182 191 162 44 chr2 226632239 226632289 -26624294 - MIR3 SINE MIR -39 169 108 878 214 33 6 chr2 226632467 226632649 -26623934 + MER5A DNA MER1_type 1 187 -2 1770 161 10 7 chr2 226634659 226634957 -26621626 - MER50 LTR ERV1 -28 706 408 3046 130 109 93 chr2 226634960 226635367 -26621216 + pTR5 LTR ERV1 743 1142 -1296 192 97 0 0 chr2 226635367 226635398 -26621185 + (CCCCCG)n Simple_repeat Simple_repeat 5 35 0 3046 130 109 93 chr2 226635398 226636298 -26620285 + pTR5 LTR ERV1 1142 2438 0 2476 153 12 8 chr2 226636307 226636707 -26619876 - MER50 LTR ERV1 -332 402 1 216 231 0 58 chr2 226636969 226637021 -26619562 - L3 LINE CR1 -196 1381 1333 324 212 254 34 chr2 226637032 226637150 -26619433 + L2 LINE L2 3164 3307 -6 192 271 136 0 chr2 226637481 226637540 -26619043 - L2 LINE L2 -49 3223 3157 284 282 94 0 chr2 226637554 226637639 -26618944 - MER63 DNA MER1_type 0 1062 970 704 188 78 7 chr2 226637655 226637809 -26618774 - MER63 DNA MER1_type -815 246 82 227 312 130 7 chr2 226639815 226639953 -26616630 - MIR SINE MIR -98 164 10 892 161 92 6 chr2 226640129 226640303 -26616280 + MER53 DNA DNA 1 189 0 357 188 13 117 chr2 226640546 226640700 -26615883 - L1MCa LINE L1 -5188 1238 1101 337 250 125 62 chr2 226641480 226641672 -26614911 + L2 LINE L2 3109 3312 -1 549 318 122 48 chr2 226642728 226643359 -26613224 + L2 LINE L2 2255 2969 -303 2284 184 31 43 chr2 226643359 226643870 -26612713 + MLT1D LTR MaLR 1 505 0 549 318 122 48 chr2 226643870 226643995 -26612588 + L2 LINE L2 2969 3083 -189 727 269 20 46 chr2 226644079 226644276 -26612307 + MIR SINE MIR 2 193 -69 437 287 59 29 chr2 226644278 226644414 -26612169 + MIR SINE MIR 116 255 -7 282 341 24 41 chr2 226644406 226644529 -26612054 + L2 LINE L2 3134 3254 -18 * 294 73 0 0 chr2 226644535 226644576 -26612007 + (TGAA)n Simple_repeat Simple_repeat 2 42 0 968 178 8 85 chr2 226644661 226644897 -26611686 - MER20 DNA MER1_type -1 218 1 302 247 32 11 chr2 226646334 226646427 -26610156 - MIR3 SINE MIR -52 156 62 39 22 0 0 chr2 226646685 226646731 -26609852 + AT_rich Low_complexity Low_complexity 1 46 0 359 281 116 30 chr2 226646913 226647077 -26609506 + L3 LINE CR1 1020 1197 -380 226 274 80 18 chr2 226647170 226647283 -26609300 - L2 LINE L2 -1330 1984 1865 1561 192 56 56 chr2 226647890 226648286 -26608297 - MSTD LTR MaLR 0 396 1 181 225 0 28 chr2 226648291 226648362 -26608221 + T-rich Low_complexity Low_complexity 4 72 0 380 311 159 0 chr2 226648546 226648697 -26607886 + MER5A DNA MER1_type 9 183 -6 1551 194 82 24 chr2 226648809 226649553 -26607030 - L1MCa LINE L1 -3993 2571 1839 1723 137 8 109 chr2 226649553 226649939 -26606644 + MER4A LTR ERV1 1 347 -317 2133 176 65 10 chr2 226649979 226650377 -26606206 - MSTB LTR MaLR -2 424 5 4879 172 33 9 chr2 226650378 226651228 -26605355 - MSTB-int LTR MaLR 0 1651 782 * 6006 191 26 16 chr2 226651219 226652040 -26604543 + MST-int LTR MaLR 506 1344 -307 2192 91 0 19 chr2 226652040 226652349 -26604234 + AluSc SINE Alu 1 303 -6 6006 191 26 16 chr2 226652349 226652661 -26603922 + MST-int LTR MaLR 1344 1651 0 3020 159 12 0 chr2 226652686 226653183 -26603400 - MSTB-int LTR MaLR -1147 504 2 2122 166 62 10 chr2 226653222 226653607 -26602976 - MSTB LTR MaLR -21 405 1 797 218 36 50 chr2 226653614 226653894 -26602689 + MER4C LTR ERV1 275 462 -3 1875 175 63 38 chr2 226653902 226654381 -26602202 - L1MCa LINE L1 -4819 1745 1255 1764 256 67 58 chr2 226654380 226655198 -26601385 - L1MCa LINE L1 -5218 827 1 * 549 220 77 54 chr2 226655328 226655496 -26601087 + MER5B DNA MER1_type 7 178 0 518 257 17 50 chr2 226655685 226655940 -26600643 + MLT1E LTR MaLR 1 234 -390 997 200 20 5 chr2 226655960 226656155 -26600428 + MLT1E LTR MaLR 396 593 0 354 328 67 43 chr2 226656158 226656411 -26600172 + MIR SINE MIR 4 262 0 2375 170 22 0 chr2 226656524 226656935 -26599648 + L1PB4 LINE L1 5730 6149 -7 183 327 35 53 chr2 226657026 226657139 -26599444 - L3b LINE CR1 -126 1457 1347 1465 172 0 84 chr2 226657139 226657459 -26599124 - AluJo SINE Alu -13 299 7 442 343 30 30 chr2 226657580 226657778 -26598805 - MIR SINE MIR -50 212 15 436 261 38 45 chr2 226660280 226660437 -26596146 - MIR3 SINE MIR -5 203 48 241 195 0 0 chr2 226660639 226660680 -26595903 - MER94 DNA DNA -87 47 7 307 273 13 0 chr2 226660883 226660960 -26595623 + MIR3 SINE MIR 107 184 -24 425 217 202 48 chr2 226661564 226661756 -26594827 + MIR SINE MIR 27 241 -21 2189 100 3 0 chr2 226663203 226663503 -26593080 + AluSg SINE Alu 1 301 -9 495 214 14 160 chr2 226663869 226664097 -26592486 + MLT1F LTR MaLR 1 197 -365 481 280 74 26 chr2 226666426 226666525 -26590058 - LTR16C LTR ERVL -8 483 390 2021 135 0 0 chr2 226666525 226666814 -26589769 + AluSx SINE Alu 1 289 -23 481 280 74 26 chr2 226666814 226667078 -26589505 - LTR16C LTR ERVL -101 390 73 2401 60 0 31 chr2 226668779 226669098 -26587485 + AluY SINE Alu 1 309 -2 1048 260 106 16 chr2 226671078 226671466 -26585117 + LTR16A LTR ERVL 15 437 -13 216 191 43 0 chr2 226671678 226671725 -26584858 + L2 LINE L2 2920 2968 -345 278 363 57 8 chr2 226671888 226672012 -26584571 + L2 LINE L2 3180 3309 -4 29 0 0 0 chr2 226672060 226672089 -26584494 + AT_rich Low_complexity Low_complexity 1 29 0 996 220 5 5 chr2 226672157 226672357 -26584226 - MER58A DNA MER1_type -8 216 17 698 261 121 0 chr2 226672889 226673096 -26583487 - MIR SINE MIR -14 248 17 228 111 0 0 chr2 226673211 226673247 -26583336 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 284 150 50 0 chr2 226673248 226673308 -26583275 - L1MB5 LINE L1 0 6174 6112 671 187 7 36 chr2 226673308 226673447 -26583136 + AluJo SINE Alu 2 136 -176 3136 166 23 12 chr2 226673448 226674021 -26582562 - L1MB5 LINE L1 -54 6120 5542 2008 190 93 10 chr2 226674029 226674439 -26582144 + MER66A LTR ERV1 27 470 -8 460 172 6 147 chr2 226674447 226674604 -26581979 - L1MB5 LINE L1 -661 5519 5385 660 206 64 0 chr2 226674604 226674745 -26581838 + AluJo SINE Alu 133 282 -30 225 65 0 0 chr2 226674748 226674779 -26581804 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 765 227 56 0 chr2 226674785 226674983 -26581600 - L1MB5 LINE L1 -751 5395 5187 1680 162 35 27 chr2 226674993 226675345 -26581238 + LTR45B LTR ERV1 3 393 -96 708 210 26 0 chr2 226675439 226675634 -26580949 - L1MB5 LINE L1 -966 5180 4981 643 148 134 7 chr2 226675705 226675847 -26580736 - MLT1C LTR MaLR -297 170 11 452 268 0 65 chr2 226676193 226676346 -26580237 - L1ME3 LINE L1 -1 6161 6019 506 188 211 8 chr2 226676353 226676481 -26580102 + MER45A DNA AcHobo 2 155 -23 276 245 0 0 chr2 226676520 226676573 -26580010 + L2 LINE L2 3007 3059 -213 334 221 100 36 chr2 226676959 226677099 -26579484 - MIR3 SINE MIR -7 201 53 651 298 22 0 chr2 226677763 226677941 -26578642 - MIR SINE MIR 0 262 81 1851 113 93 31 chr2 226678287 226678640 -26577943 - THE1C LTR MaLR 0 375 1 1663 202 26 95 chr2 226678661 226679062 -26577521 - MLT1C LTR MaLR 0 467 40 207 0 0 0 chr2 226679062 226679085 -26577498 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 3165 71 10 0 chr2 226679089 226679496 -26577087 - L1PA10 LINE L1 -16 6152 5742 1663 202 26 95 chr2 226679496 226679585 -26576998 - MLT1C LTR MaLR -430 37 6 293 288 45 18 chr2 226680197 226680308 -26576275 - MLT1K LTR MaLR -64 524 411 377 234 32 0 chr2 226680370 226680464 -26576119 - MLT1K LTR MaLR -338 250 154 895 254 192 14 chr2 226680482 226680852 -26575731 - MLT1J1 LTR MaLR -10 436 1 1937 221 33 56 chr2 226681059 226681574 -26575009 - MLT1H1 LTR MaLR -8 547 45 681 300 24 0 chr2 226681920 226682130 -26574453 - MIR SINE MIR -23 239 25 27 0 0 0 chr2 226682884 226682911 -26573672 + AT_rich Low_complexity Low_complexity 1 27 0 28 0 0 0 chr2 226683544 226683572 -26573011 + AT_rich Low_complexity Low_complexity 1 28 0 278 273 15 53 chr2 226684280 226684412 -26572171 + CT-rich Low_complexity Low_complexity 4 130 0 885 235 31 5 chr2 226685232 226685428 -26571155 + MER3 DNA MER1_type 3 203 -6 281 161 0 46 chr2 226685507 226685594 -26570989 + CT-rich Low_complexity Low_complexity 2 84 0 1781 140 4 0 chr2 226685602 226685852 -26570731 - AluSx SINE Alu -61 251 1 243 0 0 0 chr2 226685928 226685955 -26570628 + (CAA)n Simple_repeat Simple_repeat 1 27 0 418 264 25 38 chr2 226685955 226686114 -26570469 - MIR SINE MIR -89 173 17 298 336 27 0 chr2 226686146 226686295 -26570288 + MIR3 SINE MIR 49 201 -7 229 125 36 36 chr2 226687402 226687458 -26569125 - Charlie8 DNA MER1_type -2259 158 103 1844 171 70 42 chr2 226688039 226688108 -26568475 - MLT2D LTR ERVL 0 414 348 180 0 0 0 chr2 226688108 226688128 -26568455 + (GA)n Simple_repeat Simple_repeat 1 20 0 1844 171 70 42 chr2 226688128 226688461 -26568122 - MLT2D LTR ERVL -66 348 1 429 305 32 11 chr2 226688678 226688865 -26567718 + MER117 DNA MER1_type 3 193 -4 1546 195 47 0 chr2 226689195 226689472 -26567111 + AluJo SINE Alu 1 290 -22 419 235 115 38 chr2 226689532 226689715 -26566868 - MER3 DNA MER1_type -2 207 11 2451 117 45 0 chr2 226690048 226690407 -26566176 + THE1C LTR MaLR 1 375 0 517 218 153 57 chr2 226690694 226690872 -26565711 + MIR SINE MIR 7 213 -49 2107 133 56 14 chr2 226690872 226691232 -26565351 - THE1C LTR MaLR 0 375 1 517 218 153 57 chr2 226691232 226691282 -26565301 + MIR SINE MIR 213 257 -5 245 293 0 0 chr2 226691292 226691350 -26565233 + L2 LINE L2 3123 3180 -92 458 168 0 11 chr2 226692578 226692673 -26563910 + CT-rich Low_complexity Low_complexity 2 95 0 891 229 17 0 chr2 226693721 226693900 -26562683 - MER5A DNA MER1_type -1 188 7 342 67 0 0 chr2 226694333 226694378 -26562205 + (ATTAG)n Simple_repeat Simple_repeat 2 46 0 446 326 26 21 chr2 226695014 226695204 -26561379 + LTR16C LTR ERVL 286 476 -15 1774 92 4 0 chr2 226695277 226695505 -26561078 - AluSp SINE Alu -8 305 77 22 0 0 0 chr2 226695555 226695577 -26561006 + AT_rich Low_complexity Low_complexity 1 22 0 1075 283 146 36 chr2 226695577 226696298 -26560285 - HAL1 LINE L1 -1 2506 1689 2485 86 0 3 chr2 226696298 226696611 -26559972 - AluSx SINE Alu 0 312 1 1075 283 146 36 chr2 226696611 226696676 -26559907 - HAL1 LINE L1 -818 1689 1633 1154 189 65 55 chr2 226696846 226697153 -26559430 - MER33 DNA MER1_type -13 311 2 609 221 0 0 chr2 226697209 226697336 -26559247 + MIR SINE MIR 77 203 -59 854 310 79 24 chr2 226697786 226698418 -26558165 + L1ME3A LINE L1 5291 5957 -213 1881 155 0 16 chr2 226698709 226699012 -26557571 - AluJo SINE Alu 0 312 15 375 285 64 52 chr2 226699071 226699243 -26557340 - HAL1 LINE L1 -1756 751 578 181 263 145 0 chr2 226699567 226699643 -26556940 - L3b LINE CR1 -209 1374 1288 5788 112 22 22 chr2 226700937 226701858 -26554725 - L1PA13 LINE L1 -2 6161 5221 15469 205 13 22 chr2 226701858 226703077 -26553506 - L1PA13 LINE L1 -1386 4760 3532 294 146 83 0 chr2 226703077 226703125 -26553458 + AluSx SINE Alu 1 52 -250 1980 124 0 4 chr2 226703125 226703399 -26553184 + AluSx SINE Alu 28 300 -12 15469 205 13 22 chr2 226703399 226705514 -26551069 - L1PA13 LINE L1 -2612 3534 1407 2763 90 3 6 chr2 226705910 226706275 -26550308 - THE1B LTR MaLR 0 364 1 2112 172 80 49 chr2 226707698 226708117 -26548466 - MLT1D LTR MaLR 0 505 67 1886 144 0 17 chr2 226708117 226708415 -26548168 + AluSx SINE Alu 13 305 -7 2112 172 80 49 chr2 226708415 226708483 -26548100 - MLT1D LTR MaLR -438 67 3 332 286 48 8 chr2 226708913 226709039 -26547544 - MIR SINE MIR -26 236 106 202 189 0 0 chr2 226709732 226709769 -26546814 + (CAT)n Simple_repeat Simple_repeat 3 39 0 2236 107 0 13 chr2 226709834 226710132 -26546451 + AluSc SINE Alu 1 294 -15 204 250 145 0 chr2 226710197 226710273 -26546310 + MIR SINE MIR 176 262 0 459 111 222 134 chr2 226710372 226710543 -26546040 + MER53 DNA DNA 1 186 -3 14907 137 26 8 chr2 226711674 226713071 -26543512 + Tigger1 DNA MER2_type 1 1462 -956 2467 129 28 8 chr2 226713071 226713428 -26543155 + THE1B LTR MaLR 1 364 0 14907 137 26 8 chr2 226713428 226714404 -26542179 + Tigger1 DNA MER2_type 1462 2418 0 410 273 160 48 chr2 226714588 226714639 -26541944 + L1ME4a LINE L1 5383 5427 -694 1841 168 3 0 chr2 226714639 226714930 -26541653 + AluJo SINE Alu 1 292 -20 410 273 160 48 chr2 226714930 226715277 -26541306 + L1ME4a LINE L1 5427 5826 -295 753 318 84 26 chr2 226715483 226715826 -26540757 + LTR33 LTR ERVL 8 370 -151 2049 137 7 0 chr2 226715837 226716137 -26540446 - AluSq SINE Alu -11 302 1 22 0 0 0 chr2 226716213 226716235 -26540348 + AT_rich Low_complexity Low_complexity 1 22 0 2466 87 0 6 chr2 226716352 226716664 -26539919 - AluSx SINE Alu 0 312 3 26 0 0 0 chr2 226716742 226716768 -26539815 + AT_rich Low_complexity Low_complexity 1 26 0 275 279 10 0 chr2 226716942 226717046 -26539537 + (TA)n Simple_repeat Simple_repeat 1 105 0 462 168 17 25 chr2 226719133 226719252 -26537331 + CT-rich Low_complexity Low_complexity 4 121 0 767 209 51 56 chr2 226719270 226719504 -26537079 - L1MB8 LINE L1 -1 6177 5945 607 221 166 38 chr2 226720311 226720601 -26535982 - MLT1F LTR MaLR -5 537 211 975 257 124 39 chr2 226720606 226720944 -26535639 - MLT1H1 LTR MaLR -186 369 3 402 296 30 7 chr2 226723528 226723663 -26532920 + MIR3 SINE MIR 21 158 -50 590 260 40 7 chr2 226723977 226724127 -26532456 - Charlie7 DNA MER1_type -2457 155 1 1747 212 54 27 chr2 226725079 226725527 -26531056 - MLT1C LTR MaLR 0 467 8 238 67 44 0 chr2 226725967 226726012 -26530571 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 1779 126 44 4 chr2 226726017 226726288 -26530295 - AluSp SINE Alu -31 282 1 28329 95 8 11 chr2 226726300 226727341 -26529242 - L1PA7 LINE L1 0 6469 5426 2182 113 13 3 chr2 226727341 226727642 -26528941 - AluSp SINE Alu -9 304 1 28329 95 8 11 chr2 226727642 226733038 -26523545 - L1PA7 LINE L1 -1043 5426 8 345 24 0 0 chr2 226733054 226733096 -26523487 + (TTA)n Simple_repeat Simple_repeat 1 42 0 1616 145 25 75 chr2 226734791 226735109 -26521474 + AluJo SINE Alu 1 302 -10 31 0 0 0 chr2 226735348 226735379 -26521204 + AT_rich Low_complexity Low_complexity 1 31 0 581 167 0 0 chr2 226736581 226736665 -26519918 + FLAM_C SINE Alu 36 119 -24 427 276 68 84 chr2 226738066 226738303 -26518280 + MIR SINE MIR 10 245 -17 517 315 44 10 chr2 226738864 226739067 -26517516 + MIR SINE MIR 34 243 -19 304 308 9 19 chr2 226739149 226739256 -26517327 + CT-rich Low_complexity Low_complexity 5 110 0 186 43 0 0 chr2 226740441 226740464 -26516119 + (CA)n Simple_repeat Simple_repeat 1 23 0 2276 167 44 15 chr2 226740881 226741289 -26515294 + MSTB LTR MaLR 1 420 -6 632 291 108 0 chr2 226741855 226742068 -26514515 - MIR SINE MIR -19 243 8 1261 234 65 14 chr2 226742837 226743191 -26513392 - L1M4 LINE L1 -1216 4930 4559 493 310 26 19 chr2 226743470 226743625 -26512958 - MIR SINE MIR -73 189 34 352 104 30 0 chr2 226743686 226743753 -26512830 + GA-rich Low_complexity Low_complexity 1 69 0 253 368 9 0 chr2 226747014 226747120 -26509463 - MIR3 SINE MIR -6 202 96 500 269 82 12 chr2 226747773 226747944 -26508639 - MER5A DNA MER1_type 0 189 7 1051 152 30 35 chr2 226748107 226748305 -26508278 + MIR SINE MIR 9 205 -57 314 331 23 23 chr2 226748349 226748479 -26508104 - MIR3 SINE MIR -46 162 33 515 175 21 0 chr2 226750504 226750601 -26505982 + Charlie5 DNA MER1_type 1 99 -2513 1579 164 63 25 chr2 226750615 226750981 -26505602 + Charlie5 DNA MER1_type 2244 2623 0 287 83 0 0 chr2 226751246 226751282 -26505301 - tRNA-Arg-AGA tRNA tRNA -40 36 1 278 358 59 27 chr2 226751615 226751798 -26504785 + MIR3 SINE MIR 1 189 -19 296 298 26 0 chr2 226752021 226752135 -26504448 - L1ME LINE L1 -492 5629 5513 343 317 55 22 chr2 226752138 226752321 -26504262 - L1ME LINE L1 -2329 5456 5268 8281 18 0 4 chr2 226753400 226754405 -26502178 - L1PA3 LINE L1 0 6155 5153 192 288 51 0 chr2 226754448 226754507 -26502076 - L3 LINE CR1 -128 1449 1388 523 336 87 4 chr2 226754605 226754846 -26501737 - L3 LINE CR1 -430 1147 887 266 221 0 12 chr2 226755647 226755733 -26500850 + (TA)n Simple_repeat Simple_repeat 1 85 0 204 345 108 56 chr2 226755787 226756074 -26500509 - L3 LINE CR1 -1159 418 117 2419 130 31 8 chr2 226757456 226757811 -26498772 - THE1B LTR MaLR -1 363 1 374 335 16 14 chr2 226758097 226758248 -26498335 + MIR3 SINE MIR 12 164 -64 2347 90 0 0 chr2 226758268 226758556 -26498027 - AluSc SINE Alu -21 288 1 651 345 29 4 chr2 226759419 226759665 -26496918 - MIR SINE MIR 0 262 11 1390 280 48 9 chr2 226760240 226760697 -26495886 - LTR33 LTR ERVL -28 493 19 180 77 0 0 chr2 226760954 226760980 -26495603 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 2787 53 0 0 chr2 226760981 226761303 -26495280 - L1PA5 LINE L1 -13 6141 5820 454 261 190 0 chr2 226761577 226761719 -26494864 + MER5A DNA MER1_type 14 182 -7 2009 123 0 43 chr2 226761797 226762122 -26494461 + AluSx SINE Alu 1 311 -1 232 240 62 62 chr2 226762235 226762331 -26494252 - MIR SINE MIR -67 195 100 348 266 13 0 chr2 226762530 226762609 -26493974 - MER5A DNA MER1_type -84 105 26 220 282 0 82 chr2 226762633 226762743 -26493840 + MER5A DNA MER1_type 1 101 -88 307 341 6 24 chr2 226763071 226763238 -26493345 + GA-rich Low_complexity Low_complexity 3 166 0 30 0 0 0 chr2 226763521 226763551 -26493032 + AT_rich Low_complexity Low_complexity 1 30 0 1250 237 85 9 chr2 226763551 226763985 -26492598 + L1M4 LINE L1 4143 4609 -1537 183 206 22 98 chr2 226764046 226764138 -26492445 + MIR SINE MIR 178 262 0 456 304 132 0 chr2 226765336 226765556 -26491027 - MIR SINE MIR -6 256 8 233 236 60 17 chr2 226765916 226766001 -26490582 + MIR SINE MIR 18 105 -103 209 164 0 36 chr2 226766022 226766077 -26490506 + (TTATG)n Simple_repeat Simple_repeat 3 55 0 22 0 0 0 chr2 226766485 226766507 -26490076 + AT_rich Low_complexity Low_complexity 1 22 0 184 268 0 0 chr2 226766528 226766569 -26490014 + MIR SINE MIR 103 143 -65 584 240 98 66 chr2 226766728 226767186 -26489397 - MLT1H LTR MaLR -3 546 1 207 0 0 0 chr2 226767435 226767458 -26489125 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 318 106 0 0 chr2 226768082 226768129 -26488454 + (CA)n Simple_repeat Simple_repeat 2 48 0 641 270 122 30 chr2 226768579 226768849 -26487734 - L2 LINE L2 0 3313 3019 908 294 64 40 chr2 226769311 226769907 -26486676 + L1MC4a LINE L1 3743 4352 -1794 626 296 101 80 chr2 226769954 226770729 -26485854 + L1MC4a LINE L1 4456 5246 -900 5145 214 72 115 chr2 226770739 226772006 -26484577 + L1MC4a LINE L1 5255 6576 -1232 2094 125 3 7 chr2 226772006 226772309 -26484274 + AluSx SINE Alu 1 302 -10 5145 214 72 115 chr2 226772309 226772501 -26484082 + L1MC4a LINE L1 6576 6775 -1033 333 0 0 0 chr2 226772501 226772538 -26484045 + (TG)n Simple_repeat Simple_repeat 2 38 0 5145 214 72 115 chr2 226772538 226773442 -26483141 + L1MC4a LINE L1 6775 7516 -292 1927 170 13 3 chr2 226773460 226773772 -26482811 - MLT2B1 LTR ERVL -205 315 1 387 208 66 19 chr2 226774150 226774256 -26482327 - MIR3 SINE MIR -33 175 65 5148 52 18 0 chr2 226774439 226775036 -26481547 + L1PA5 LINE L1 5542 6149 -5 197 315 0 0 chr2 226775129 226775183 -26481400 - L2 LINE L2 -10 3262 3209 1148 280 84 12 chr2 226775978 226776407 -26480176 + LTR33 LTR ERVL 56 515 -6 234 156 0 0 chr2 226776421 226776466 -26480117 + (CA)n Simple_repeat Simple_repeat 1 45 0 258 308 68 0 chr2 226777413 226777530 -26479053 + L2 LINE L2 3189 3313 0 488 237 71 0 chr2 226777930 226778059 -26478524 - MIR SINE MIR -66 142 28 296 326 99 0 chr2 226778028 226778169 -26478414 - L3 LINE CR1 -134 1443 1289 * 296 321 110 81 chr2 226778495 226778903 -26477680 - L2 LINE L2 -1 3271 2852 313 338 116 58 chr2 226778934 226779198 -26477385 - L2 LINE L2 -476 2838 2591 2089 119 3 0 chr2 226779198 226779492 -26477091 + AluSq SINE Alu 1 295 -18 313 338 116 58 chr2 226779492 226779795 -26476788 - L2 LINE L2 -723 2591 2238 297 269 43 0 chr2 226779796 226779889 -26476694 + CT-rich Low_complexity Low_complexity 3 99 0 184 196 178 84 chr2 226781407 226781514 -26475069 - L2 LINE L2 0 3313 3197 251 208 56 56 chr2 226781609 226781681 -26474902 - MLT1K LTR MaLR -6 582 511 205 226 0 57 chr2 226784106 226784159 -26472424 - MIR SINE MIR -1 261 212 404 281 52 7 chr2 226785260 226785395 -26471188 - MIR SINE MIR -102 160 20 720 164 37 74 chr2 226786498 226786565 -26470018 + MER96B DNA MER1_type? 232 300 -117 288 0 0 0 chr2 226786565 226786597 -26469986 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 2152 89 3 0 chr2 226786599 226786881 -26469702 - AluSp SINE Alu -30 283 1 720 164 37 74 chr2 226786881 226786999 -26469584 + MER96B DNA MER1_type? 301 413 -4 488 306 18 35 chr2 226787023 226787193 -26469390 + MIR SINE MIR 96 262 0 207 69 0 0 chr2 226787871 226787900 -26468683 + (T)n Simple_repeat Simple_repeat 1 29 0 217 218 241 23 chr2 226788714 226788801 -26467782 + MIR SINE MIR 85 190 -72 350 237 38 23 chr2 226789634 226789765 -26466818 + LTR33 LTR ERVL 3 135 -386 370 378 51 5 chr2 226790775 226790971 -26465612 + MIR SINE MIR 15 219 -43 2201 105 0 3 chr2 226791097 226791401 -26465182 - AluSc SINE Alu -1 308 6 1812 121 80 47 chr2 226791757 226792120 -26464463 + THE1C LTR MaLR 1 375 0 819 233 75 25 chr2 226792438 226792678 -26463905 - MIR SINE MIR -5 257 6 202 344 180 16 chr2 226792868 226792990 -26463593 - MIR SINE MIR -74 188 47 2064 120 7 0 chr2 226793668 226793968 -26462615 - AluSx SINE Alu -10 302 1 216 236 14 28 chr2 226794494 226794566 -26462017 + CT-rich Low_complexity Low_complexity 3 73 0 184 329 13 13 chr2 226796101 226796177 -26460406 - MIR SINE MIR -139 123 48 207 0 0 0 chr2 226796350 226796373 -26460210 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 1953 82 3 55 chr2 226796375 226796668 -26459915 - AluSx SINE Alu -34 278 1 243 207 86 0 chr2 226796813 226796871 -26459712 - MIR SINE MIR 0 262 200 1000 285 50 29 chr2 226796887 226797270 -26459313 + L2 LINE L2 2919 3309 -4 286 361 9 0 chr2 226797268 226797376 -26459207 - MIR SINE MIR -112 150 42 * 1035 263 72 37 chr2 226798578 226799040 -26457543 + LTR33A LTR ERVL 54 521 -2 211 324 42 0 chr2 226800649 226800720 -26455863 + L2 LINE L2 3164 3237 -35 437 299 98 13 chr2 226801004 226801238 -26455345 - MER102b DNA MER1_type -6 335 82 1249 268 126 37 chr2 226801703 226802195 -26454388 - MLT1E LTR MaLR 0 593 58 486 296 184 9 chr2 226805512 226805735 -26450848 + MLT1K LTR MaLR 2 263 -325 349 194 16 0 chr2 226805743 226805805 -26450778 + MLT1K LTR MaLR 413 475 -113 1764 116 4 0 chr2 226807308 226807567 -26449016 - AluSx SINE Alu -6 306 47 269 359 29 35 chr2 226807578 226807748 -26448835 + MIR3 SINE MIR 32 200 -8 287 319 118 7 chr2 226809295 226809430 -26447153 - MIR3 SINE MIR -13 195 46 284 274 27 0 chr2 226810041 226810114 -26446469 - MIR3 SINE MIR -23 185 111 198 0 0 0 chr2 226810903 226810925 -26445658 + (T)n Simple_repeat Simple_repeat 1 22 0 365 329 48 30 chr2 226812440 226812607 -26443976 - MIR3 SINE MIR -20 188 19 218 267 293 13 chr2 226813031 226813181 -26443402 - MIR SINE MIR -6 256 65 274 248 69 62 chr2 226813501 226813646 -26442937 - L2 LINE L2 -159 3154 3009 231 86 29 0 chr2 226813846 226813881 -26442702 + MER97b DNA MER1_type? 143 178 -875 425 304 6 12 chr2 226814554 226814722 -26441861 + CT-rich Low_complexity Low_complexity 1 167 0 449 304 69 39 chr2 226814808 226815012 -26441571 + MIR SINE MIR 35 244 -18 1606 187 3 10 chr2 226815331 226815631 -26440952 - AluJb SINE Alu -14 298 1 24 0 0 0 chr2 226815926 226815950 -26440633 + AT_rich Low_complexity Low_complexity 1 24 0 311 289 47 8 chr2 226816118 226816246 -26440337 + L2 LINE L2 3106 3238 -75 280 333 83 33 chr2 226816944 226817184 -26439399 + L3 LINE CR1 1149 1400 -177 386 223 79 0 chr2 226817198 226817337 -26439246 + MER113 DNA MER1_type? 2 151 -370 4450 112 8 9 chr2 226817363 226818024 -26438559 + L1PA16 LINE L1 5315 5974 -192 2070 127 3 0 chr2 226818024 226818331 -26438252 + AluSx SINE Alu 1 308 -4 257 163 0 0 chr2 226818397 226818440 -26438143 + L1PA16 LINE L1 6094 6136 -30 330 255 50 13 chr2 226818563 226818987 -26437596 + (TG)n Simple_repeat Simple_repeat 1 439 0 210 122 51 64 chr2 226818988 226819144 -26437439 + (GTGTG)n Simple_repeat Simple_repeat 2 155 0 296 244 52 12 chr2 226819149 226819321 -26437262 + (TG)n Simple_repeat Simple_repeat 1 179 0 221 153 83 6 chr2 226819344 226819510 -26437073 + (TG)n Simple_repeat Simple_repeat 1 178 0 333 159 74 51 chr2 226819531 226819707 -26436876 + (GTGTG)n Simple_repeat Simple_repeat 1 180 0 197 336 199 8 chr2 226819801 226819932 -26436651 - MIR3 SINE MIR -33 175 20 282 307 110 0 chr2 226821102 226821229 -26435354 + Charlie8 DNA MER1_type 103 243 -2174 232 359 152 22 chr2 226821426 226821610 -26434973 + L3b LINE CR1 1351 1558 -25 2071 93 32 0 chr2 226822312 226822592 -26433991 + AluSx SINE Alu 1 289 -23 1916 106 0 0 chr2 226822837 226823101 -26433482 + AluSc SINE Alu 39 302 -7 466 279 62 19 chr2 226823872 226824033 -26432550 + MIR3 SINE MIR 37 204 -4 333 0 0 0 chr2 226824270 226824307 -26432276 + (CA)n Simple_repeat Simple_repeat 1 37 0 267 233 80 110 chr2 226824489 226824508 -26432075 - MIR3 SINE MIR -28 180 162 621 223 88 52 chr2 226824508 226824759 -26431824 + MIR SINE MIR 2 261 -1 267 233 80 110 chr2 226824759 226824902 -26431681 - MIR3 SINE MIR -46 162 23 186 250 80 23 chr2 226826084 226826172 -26430411 + MIR SINE MIR 54 146 -62 336 271 47 0 chr2 226826982 226827067 -26429516 - MIR3 SINE MIR -34 174 86 608 250 82 49 chr2 226827789 226828245 -26428338 - MLT1G1 LTR MaLR -2 590 25 321 283 165 48 chr2 226828693 226828923 -26427660 + MIR SINE MIR 6 262 0 281 326 15 15 chr2 226829015 226829150 -26427433 + GA-rich Low_complexity Low_complexity 4 138 0 28 71 0 0 chr2 226830009 226830065 -26426518 + AT_rich Low_complexity Low_complexity 1 56 0 21 0 0 0 chr2 226830338 226830359 -26426224 + AT_rich Low_complexity Low_complexity 1 21 0 2118 125 0 3 chr2 226830386 226830697 -26425886 - AluSg SINE Alu 0 310 1 330 87 0 0 chr2 226831515 226831561 -26425022 + (CA)n Simple_repeat Simple_repeat 2 47 0 321 245 0 39 chr2 226831595 226831697 -26424886 - LTR33 LTR ERVL -49 472 375 424 303 67 17 chr2 226831807 226831985 -26424598 - LTR33 LTR ERVL -326 195 9 702 231 12 6 chr2 226832985 226833145 -26423438 + MER5B DNA MER1_type 6 166 -12 485 326 33 19 chr2 226834095 226834310 -26422273 + MIR SINE MIR 42 259 -3 350 298 10 32 chr2 226834366 226834544 -26422039 + MIR SINE MIR 16 190 -63 213 333 138 13 chr2 226834903 226835062 -26421521 + MIR3 SINE MIR 30 208 0 316 283 192 6 chr2 226835110 226835287 -26421296 + L3 LINE CR1 1367 1576 -1 252 353 52 29 chr2 226836967 226837103 -26419480 - L2 LINE L2 0 3272 3134 217 299 13 0 chr2 226837480 226837557 -26419026 + MIR SINE MIR 66 143 -65 215 231 170 41 chr2 226838109 226838256 -26418327 - MIR3 SINE MIR -6 202 37 229 255 0 0 chr2 226838404 226838451 -26418132 - MLT1L LTR MaLR -122 493 447 2552 69 0 0 chr2 226838597 226838903 -26417680 - AluY SINE Alu -5 306 1 253 185 37 19 chr2 226838945 226838999 -26417584 - MLT1J2 LTR MaLR -327 123 69 22 35 0 0 chr2 226840563 226840592 -26415991 + AT_rich Low_complexity Low_complexity 1 29 0 302 328 17 33 chr2 226842024 226842204 -26414379 - L2 LINE L2 -503 2811 2635 270 327 0 0 chr2 226842979 226843141 -26413442 + (TG)n Simple_repeat Simple_repeat 1 162 0 943 166 18 12 chr2 226843167 226843336 -26413247 + MLT1B LTR MaLR 1 170 -220 2001 150 24 0 chr2 226843349 226843682 -26412901 + MER2 DNA MER2_type 2 342 -2 5082 136 79 40 chr2 226843686 226844542 -26412041 + L1MA9 LINE L1 5254 6076 -236 3588 116 0 70 chr2 226844542 226845109 -26411474 - MER1A DNA MER1_type 0 527 1 5082 136 79 40 chr2 226845109 226845158 -26411425 + L1MA9 LINE L1 6076 6122 -190 360 0 0 0 chr2 226845158 226845198 -26411385 + (CA)n Simple_repeat Simple_repeat 2 41 0 5082 136 79 40 chr2 226845198 226845281 -26411302 + L1MA9 LINE L1 6122 6281 -31 739 195 115 91 chr2 226845281 226845568 -26411015 + MLT1B LTR MaLR 170 463 -4 473 221 69 28 chr2 226847561 226847706 -26408877 + MIR SINE MIR 100 250 -12 190 340 21 0 chr2 226847722 226847816 -26408767 + L2 LINE L2 2554 2649 -665 2092 119 44 0 chr2 226848089 226848384 -26408199 - AluSx SINE Alu -4 308 1 763 161 101 50 chr2 226850359 226850558 -26406025 - MER3 DNA MER1_type 0 209 1 204 67 0 0 chr2 226850804 226850834 -26405749 + (TA)n Simple_repeat Simple_repeat 2 31 0 255 177 0 0 chr2 226850834 226850892 -26405691 - L1MA5A LINE L1 -1 6296 6242 277 196 0 65 chr2 226851185 226851277 -26405306 - Charlie8 DNA MER1_type -2255 162 77 2378 109 0 0 chr2 226851484 226851797 -26404786 - AluSp SINE Alu 0 313 1 2107 146 122 8 chr2 226851902 226852286 -26404297 + MSTA LTR MaLR 1 428 0 1728 198 13 35 chr2 226852840 226853213 -26403370 - MLT1A1 LTR MaLR 0 365 1 186 346 49 0 chr2 226853369 226853450 -26403133 - L3b LINE CR1 -125 1458 1374 219 69 0 0 chr2 226854089 226854118 -26402465 + (TG)n Simple_repeat Simple_repeat 1 29 0 198 0 0 0 chr2 226854364 226854386 -26402197 + (A)n Simple_repeat Simple_repeat 1 22 0 951 265 12 8 chr2 226855153 226855398 -26401185 - MIR SINE MIR -2 260 15 348 225 7 7 chr2 226856016 226856167 -26400416 + GA-rich Low_complexity Low_complexity 1 151 0 255 170 0 0 chr2 226856425 226856472 -26400111 + C-rich Low_complexity Low_complexity 2 48 0 233 404 48 0 chr2 226857101 226857205 -26399378 + L2 LINE L2 3146 3254 -18 258 261 158 54 chr2 226857891 226858094 -26398489 + MIR SINE MIR 29 252 -10 264 304 20 0 chr2 226859996 226860098 -26396485 - MIR SINE MIR -100 162 59 511 108 0 0 chr2 226860220 226860294 -26396289 + MER53 DNA DNA 1 74 -115 270 188 125 0 chr2 226860309 226860389 -26396194 + MER114 LTR ERV 483 572 -76 3363 131 26 31 chr2 226860416 226860989 -26395594 + L1PA16 LINE L1 5581 6150 -16 2234 209 42 28 chr2 226861382 226861947 -26394636 - L1MD3 LINE L1 -16 7979 7407 247 206 88 0 chr2 226861953 226862021 -26394562 - MLT1F1 LTR MaLR -436 131 58 252 0 0 0 chr2 226863242 226863270 -26393313 + (TG)n Simple_repeat Simple_repeat 2 29 0 208 236 0 18 chr2 226866048 226866103 -26390480 + CT-rich Low_complexity Low_complexity 4 57 0 757 236 23 41 chr2 226866583 226866803 -26389780 + MIR SINE MIR 41 256 -6 582 264 91 15 chr2 226867079 226867276 -26389307 - MLT1C LTR MaLR 0 467 256 560 107 69 10 chr2 226870813 226871102 -26385481 + (TA)n Simple_repeat Simple_repeat 1 306 0 325 74 115 0 chr2 226871118 226871266 -26385317 + (TA)n Simple_repeat Simple_repeat 1 165 0 428 97 73 6 chr2 226871278 226871443 -26385140 + (TA)n Simple_repeat Simple_repeat 1 176 0 30 0 0 0 chr2 226871443 226871473 -26385110 + AT_rich Low_complexity Low_complexity 1 30 0 198 36 107 0 chr2 226871473 226871529 -26385054 + (TA)n Simple_repeat Simple_repeat 2 63 0 268 119 34 0 chr2 226872078 226872137 -26384446 + GA-rich Low_complexity Low_complexity 2 62 0 297 291 118 8 chr2 226873361 226873598 -26382985 + L1ME LINE L1 5548 5810 -311 233 75 25 0 chr2 226875765 226875805 -26380778 + (GA)n Simple_repeat Simple_repeat 2 42 0 659 133 0 0 chr2 226876188 226876286 -26380297 + AluSg/x SINE Alu 205 302 -7 1191 73 18 12 chr2 226878792 226878957 -26377626 + AluY SINE Alu 127 292 -19 2007 130 23 68 chr2 226878957 226879341 -26377242 - L1MA7 LINE L1 -156 6135 5769 22 35 0 0 chr2 226880158 226880187 -26376396 + AT_rich Low_complexity Low_complexity 1 29 0 230 215 92 123 chr2 226881567 226881697 -26374886 - L2 LINE L2 -24 3289 3164 267 308 47 19 chr2 226881747 226881854 -26374729 + L2 LINE L2 2986 3095 -177 230 176 29 29 chr2 226883048 226883116 -26373467 + AluS SINE Alu 1 68 -234 1755 170 3 11 chr2 226933500 226933815 -26322768 + AluJb SINE Alu 3 315 0 189 0 0 0 chr2 226934141 226934162 -26322421 + (CAT)n Simple_repeat Simple_repeat 1 21 0 1647 115 0 0 chr2 226934262 226934480 -26322103 + AluSg/x SINE Alu 84 301 -9 2013 265 42 12 chr2 226934482 226935128 -26321455 + L1M4 LINE L1 3572 4236 -1910 897 172 49 20 chr2 226935133 226935336 -26321247 - MER20 DNA MER1_type -5 214 6 1817 223 76 13 chr2 226935576 226936039 -26320544 - L1ME LINE L1 -405 5761 5270 * 3907 214 30 20 chr2 226936020 226936174 -26320409 - L1MB8 LINE L1 -3 6331 6180 324 0 0 0 chr2 226936174 226936210 -26320373 + (TG)n Simple_repeat Simple_repeat 2 37 0 3907 214 30 20 chr2 226936210 226937032 -26319551 - L1MB8 LINE L1 -154 6180 5349 219 69 0 0 chr2 226937805 226937834 -26318749 + (TG)n Simple_repeat Simple_repeat 1 29 0 198 0 0 0 chr2 226938080 226938102 -26318481 + (A)n Simple_repeat Simple_repeat 1 22 0 1028 265 12 8 chr2 226938869 226939114 -26317469 - MIR SINE MIR -2 260 15 348 225 7 7 chr2 226939732 226939883 -26316700 + GA-rich Low_complexity Low_complexity 1 151 0 205 354 21 31 chr2 226939990 226940086 -26316497 + L2 LINE L2 2723 2817 -497 363 250 40 0 chr2 226940380 226940480 -26316103 + L1MEc LINE L1 1840 1927 -4613 328 312 113 62 chr2 226941945 226942237 -26314346 + L3b LINE CR1 1277 1583 0 315 0 0 0 chr2 226942406 226942441 -26314142 + (CA)n Simple_repeat Simple_repeat 1 35 0 187 266 161 0 chr2 226942590 226942692 -26313891 - MIR SINE MIR -1 207 81 337 318 112 9 chr2 226943791 226944005 -26312578 + MIR SINE MIR 15 250 -12 182 278 185 0 chr2 226944065 226944119 -26312464 + L2 LINE L2 2657 2720 -594 370 313 120 0 chr2 226944133 226944283 -26312300 + L2 LINE L2 2692 2859 -455 507 326 147 30 chr2 226944309 226944739 -26311844 + L2 LINE L2 2829 3308 -5 435 301 161 11 chr2 226945545 226945731 -26310852 - MIR SINE MIR 0 262 49 189 0 0 0 chr2 226945796 226945817 -26310766 + (CATAG)n Simple_repeat Simple_repeat 3 23 0 189 213 0 0 chr2 226946499 226946546 -26310037 + C-rich Low_complexity Low_complexity 2 48 0 293 365 82 35 chr2 226946573 226946998 -26309585 + L2 LINE L2 2818 3262 -10 183 320 51 0 chr2 226947097 226947175 -26309408 - MIR SINE MIR -78 130 49 265 404 48 0 chr2 226947175 226947279 -26309304 + L2 LINE L2 3146 3254 -18 207 361 58 13 chr2 226947546 226947701 -26308882 - L3b LINE CR1 -76 1507 1346 317 261 158 54 chr2 226947965 226948168 -26308415 + MIR SINE MIR 29 252 -10 294 304 20 0 chr2 226950070 226950172 -26306411 - MIR SINE MIR -100 162 59 478 135 0 0 chr2 226950292 226950366 -26306217 + MER53 DNA DNA 1 74 -115 274 188 125 0 chr2 226950381 226950461 -26306122 + MER114 LTR ERV 483 572 -76 3553 131 26 31 chr2 226950488 226951061 -26305522 + L1PA16 LINE L1 5581 6150 -16 2261 209 42 28 chr2 226951454 226952019 -26304564 - L1MD3 LINE L1 -16 7979 7407 247 206 88 0 chr2 226952025 226952093 -26304490 - MLT1F1 LTR MaLR -436 131 58 252 0 0 0 chr2 226953314 226953342 -26303241 + (TG)n Simple_repeat Simple_repeat 2 29 0 191 233 150 33 chr2 226954290 226954350 -26302233 - MIR3 SINE MIR -132 76 10 208 236 0 18 chr2 226956214 226956269 -26300314 + CT-rich Low_complexity Low_complexity 4 57 0 196 364 121 35 chr2 226956561 226956734 -26299849 + L3 LINE CR1 1377 1564 -13 824 236 23 41 chr2 226956749 226956969 -26299614 + MIR SINE MIR 41 256 -6 581 264 91 15 chr2 226957245 226957442 -26299141 - MLT1C LTR MaLR 0 467 256 560 107 69 10 chr2 226960979 226961268 -26295315 + (TA)n Simple_repeat Simple_repeat 1 306 0 325 74 115 0 chr2 226961284 226961432 -26295151 + (TA)n Simple_repeat Simple_repeat 1 165 0 428 97 73 6 chr2 226961444 226961609 -26294974 + (TA)n Simple_repeat Simple_repeat 1 176 0 30 0 0 0 chr2 226961609 226961639 -26294944 + AT_rich Low_complexity Low_complexity 1 30 0 198 36 107 0 chr2 226961639 226961695 -26294888 + (TA)n Simple_repeat Simple_repeat 2 63 0 268 119 34 0 chr2 226962244 226962303 -26294280 + GA-rich Low_complexity Low_complexity 2 62 0 312 291 118 8 chr2 226963527 226963764 -26292819 + L1ME LINE L1 5548 5810 -311 196 338 14 28 chr2 226964099 226964170 -26292413 - MIR SINE MIR -187 75 6 198 354 61 0 chr2 226965806 226965888 -26290695 + L2 LINE L2 3149 3235 -37 233 75 25 0 chr2 226965931 226965971 -26290612 + (GA)n Simple_repeat Simple_repeat 2 42 0 708 199 23 0 chr2 226966321 226966452 -26290131 + AluSg/x SINE Alu 170 303 -7 536 261 43 38 chr2 226966623 226966834 -26289749 - MARNA DNA Mariner -145 441 230 2123 130 0 3 chr2 226967154 226967453 -26289130 - AluSx SINE Alu -12 300 3 200 42 0 0 chr2 226967556 226967580 -26289003 + (TA)n Simple_repeat Simple_repeat 2 25 0 381 131 0 0 chr2 226967580 226967641 -26288942 + (CA)n Simple_repeat Simple_repeat 2 62 0 346 171 26 0 chr2 226969181 226969257 -26287326 + L1MA10 LINE L1 6256 6333 -1 1516 261 47 14 chr2 226969350 226969841 -26286742 - L1ME2 LINE L1 -72 6092 5586 2560 219 97 54 chr2 226969885 226970638 -26285945 - MER21B LTR ERV1 -60 803 19 3931 178 69 18 chr2 226970724 226971630 -26284953 - L1MB8 LINE L1 -27 6151 5203 270 0 0 0 chr2 226971912 226971942 -26284641 + (TG)n Simple_repeat Simple_repeat 2 31 0 230 319 22 33 chr2 226972273 226972364 -26284219 - L3 LINE CR1 -312 1265 1176 412 336 8 8 chr2 226972725 226972853 -26283730 - L2 LINE L2 -1 3271 3144 1097 194 29 5 chr2 226973161 226973367 -26283216 + MER20 DNA MER1_type 9 219 0 485 277 37 113 chr2 226974083 226974351 -26282232 - MIR SINE MIR 0 262 12 1812 249 40 20 chr2 226975510 226976005 -26280578 - MLT1D LTR MaLR 0 505 1 449 167 0 83 chr2 226976250 226976346 -26280237 - MER20 DNA MER1_type -9 210 123 2072 151 3 0 chr2 226976371 226976675 -26279908 + AluSx SINE Alu 1 305 -7 611 213 7 7 chr2 226976676 226976826 -26279757 - MER53 DNA DNA -17 172 23 503 194 0 65 chr2 226976854 226976962 -26279621 - MER20 DNA MER1_type -115 104 4 218 32 32 0 chr2 226977528 226977559 -26279024 + (TC)n Simple_repeat Simple_repeat 1 32 0 342 0 0 0 chr2 226977561 226977599 -26278984 + (CA)n Simple_repeat Simple_repeat 2 39 0 674 232 0 0 chr2 226978745 226978883 -26277700 - L1ME2 LINE L1 -9 6224 6087 506 224 229 24 chr2 226978889 226979059 -26277524 - MER63A DNA MER1_type 0 210 6 2075 207 106 42 chr2 226979064 226979715 -26276868 - L1ME2 LINE L1 -145 6088 5396 2879 247 136 31 chr2 226979718 226980889 -26275694 - L1ME2 LINE L1 -2586 3629 2308 2239 97 21 18 chr2 226980889 226981228 -26275355 + L1MA2 LINE L1 5965 6304 0 2879 247 136 31 chr2 226981228 226981349 -26275234 - L1ME2 LINE L1 -3907 2308 2201 735 254 40 35 chr2 226981361 226981707 -26274876 - L1ME2 LINE L1 -4130 2266 1919 372 309 0 43 chr2 226981770 226981886 -26274697 - L1ME2 LINE L1 -6202 194 85 2153 185 86 7 chr2 226981886 226982319 -26274264 - MLT1C LTR MaLR 0 467 1 372 309 0 43 chr2 226982319 226982364 -26274219 - L1ME2 LINE L1 -6311 85 40 368 296 19 9 chr2 226982651 226982759 -26273824 - L2 LINE L2 -15 3298 3190 979 254 95 75 chr2 226983132 226983258 -26273325 + MLT1L LTR MaLR 129 251 -364 2336 117 0 0 chr2 226983258 226983566 -26273017 - AluSx SINE Alu -4 308 1 979 254 95 75 chr2 226983566 226983880 -26272703 + MLT1L LTR MaLR 251 578 -37 323 364 15 0 chr2 226985006 226985138 -26271445 - MIR3 SINE MIR -8 200 67 * 718 274 24 40 chr2 226985119 226985367 -26271216 + MIR SINE MIR 5 249 -13 222 207 0 0 chr2 226987108 226987166 -26269417 + T-rich Low_complexity Low_complexity 2 59 0 3232 244 72 21 chr2 226987986 226988040 -26268543 - L1 LINE L1 -1676 4968 4918 15699 118 2 15 chr2 226988040 226991353 -26265230 - L1PA8 LINE L1 0 6172 2892 3232 244 72 21 chr2 226991353 226991839 -26264744 - L1 LINE L1 -1726 4918 4458 532 53 40 0 chr2 226991839 226991915 -26264668 + MADE1 DNA Mariner 2 80 0 3232 244 72 21 chr2 226991915 226993315 -26263268 - L1 LINE L1 -2186 4458 2908 5409 175 10 14 chr2 226993359 226994390 -26262193 - L1PA16 LINE L1 -9 6157 5140 2255 119 0 0 chr2 226994390 226994684 -26261899 - AluSg SINE Alu -16 294 1 5409 175 10 14 chr2 226994684 226995702 -26260881 - L1PA16 LINE L1 -1026 5140 4119 * 5541 242 60 38 chr2 226995695 226996192 -26260391 - L1 LINE L1 -3728 2916 2431 2126 109 7 0 chr2 226996192 226996477 -26260106 + AluSx SINE Alu 1 287 -25 5541 242 60 38 chr2 226996477 226998827 -26257756 - L1 LINE L1 -4213 2431 2 426 242 75 3 chr2 226998831 226998982 -26257601 - L1MC/D LINE L1 -554 5608 5450 3616 259 55 46 chr2 226999016 227000407 -26256176 - L1MC/D LINE L1 -991 5155 3739 2334 110 0 3 chr2 227000407 227000717 -26255866 - AluSc SINE Alu 0 309 1 3616 259 55 46 chr2 227000717 227001322 -26255261 - L1MC/D LINE L1 -2407 3739 3141 2147 114 3 7 chr2 227001441 227001740 -26254843 - AluSc SINE Alu -11 298 1 243 232 18 0 chr2 227001828 227001884 -26254699 + MIR SINE MIR 100 156 -106 502 254 67 57 chr2 227002470 227002717 -26253866 - MLT1H LTR MaLR -259 290 1 610 263 130 81 chr2 227003487 227003894 -26252689 - MLT1H LTR MaLR 0 549 123 708 185 0 0 chr2 227004039 227004158 -26252425 - FRAM SINE Alu -29 147 29 201 224 0 52 chr2 227006044 227006102 -26250481 - MIR SINE MIR -79 183 129 216 319 0 14 chr2 227007188 227007260 -26249323 + L2 LINE L2 3179 3249 -64 338 360 50 0 chr2 227007580 227007719 -26248864 - MIR SINE MIR -20 242 97 245 243 204 66 chr2 227007934 227008077 -26248506 - L1ME4a LINE L1 -10 6111 5989 195 42 0 0 chr2 227008077 227008101 -26248482 + (CATA)n Simple_repeat Simple_repeat 4 27 0 245 243 204 66 chr2 227008101 227008208 -26248375 - L1ME4a LINE L1 -132 5989 5898 2433 90 0 0 chr2 227008208 227008519 -26248064 - AluY SINE Alu 0 311 1 245 243 204 66 chr2 227008519 227008629 -26247954 - L1ME4a LINE L1 -223 5898 5700 259 133 0 0 chr2 227008691 227008736 -26247847 - L1ME4a LINE L1 -691 5430 5386 335 294 47 0 chr2 227008904 227008989 -26247594 - MIR3 SINE MIR -31 177 89 28 48 0 0 chr2 227009353 227009395 -26247188 + AT_rich Low_complexity Low_complexity 1 42 0 2133 99 41 7 chr2 227009484 227009778 -26246805 + AluSc SINE Alu 1 304 -5 518 86 12 0 chr2 227010436 227010517 -26246066 + (TC)n Simple_repeat Simple_repeat 1 82 0 239 269 32 21 chr2 227011093 227011186 -26245397 + GA-rich Low_complexity Low_complexity 2 95 0 690 204 0 0 chr2 227013732 227013845 -26242738 + FLAM_A SINE Alu 1 113 -29 36 23 0 0 chr2 227013879 227013922 -26242661 + AT_rich Low_complexity Low_complexity 1 43 0 207 167 0 0 chr2 227014164 227014206 -26242377 + (TCTG)n Simple_repeat Simple_repeat 3 44 0 287 356 136 24 chr2 227015477 227015772 -26240811 + L3 LINE CR1 1188 1515 -62 830 122 36 7 chr2 227015943 227016082 -26240501 + L1PA14 LINE L1 6017 6159 -2 405 0 0 0 chr2 227016166 227016211 -26240372 + (TG)n Simple_repeat Simple_repeat 2 46 0 457 268 33 60 chr2 227017642 227017825 -26238758 - MIR3 SINE MIR -15 193 16 8959 67 8 0 chr2 227017858 227019813 -26236770 - L1PA7 LINE L1 -15 6139 4181 538 82 0 0 chr2 227019813 227019898 -26236685 - L1PA7 LINE L1 -2822 3324 3240 226 239 76 65 chr2 227020679 227020771 -26235812 - MIR SINE MIR -81 127 35 399 314 26 11 chr2 227020955 227021090 -26235493 - MER5A DNA MER1_type -45 133 9 202 344 80 8 chr2 227022308 227022433 -26234150 + MIR SINE MIR 58 191 -71 596 163 7 109 chr2 227022952 227023099 -26233484 + L1MA8 LINE L1 6155 6286 -5 243 88 0 0 chr2 227023140 227023174 -26233409 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 436 283 7 14 chr2 227023202 227023340 -26233243 + MIR SINE MIR 124 260 -2 13088 128 40 58 chr2 227023449 227025909 -26230674 - Tigger1 DNA MER2_type 0 2418 2 1685 172 74 24 chr2 227026125 227026502 -26230081 + MSTD LTR MaLR 1 396 0 1066 246 75 48 chr2 227026937 227027443 -26229140 - MLT1H LTR MaLR 0 549 1 1202 297 102 45 chr2 227027448 227027750 -26228833 - L3 LINE CR1 -207 1370 1087 2019 246 49 26 chr2 227027750 227028361 -26228222 + MLT1E2 LTR MaLR 1 625 -1 1202 297 102 45 chr2 227028361 227028704 -26227879 - L3 LINE CR1 -490 1087 688 259 320 146 43 chr2 227028822 227029075 -26227508 + L2 LINE L2 3008 3286 -27 270 250 26 35 chr2 227029819 227029935 -26226648 - MLT1L LTR MaLR -345 270 156 198 0 0 0 chr2 227030548 227030570 -26226013 + (T)n Simple_repeat Simple_repeat 1 22 0 387 270 44 50 chr2 227030713 227030872 -26225711 - MIR SINE MIR -41 221 64 2233 113 0 0 chr2 227031100 227031402 -26225181 + AluSq SINE Alu 1 302 -11 25 31 0 0 chr2 227032147 227032179 -26224404 + AT_rich Low_complexity Low_complexity 1 32 0 6405 132 34 38 chr2 227032757 227033628 -26222955 - Tigger3b DNA MER2_type -1797 1231 364 2103 82 58 3 chr2 227033628 227033919 -26222664 - AluSq SINE Alu -6 307 1 6405 132 34 38 chr2 227033919 227034271 -26222312 - Tigger3b DNA MER2_type -2664 364 12 399 216 39 0 chr2 227034829 227034931 -26221652 + MER94 DNA DNA 1 106 -28 195 386 119 28 chr2 227036129 227036380 -26220203 - L2 LINE L2 -161 3111 2838 281 194 75 157 chr2 227036412 227036487 -26220096 - MIR3 SINE MIR -3 205 144 2174 141 0 6 chr2 227036487 227036800 -26219783 + AluSx SINE Alu 1 311 -1 281 194 75 157 chr2 227036800 227036858 -26219725 - MIR3 SINE MIR -64 144 83 390 195 0 0 chr2 227037277 227037359 -26219224 + (TA)n Simple_repeat Simple_repeat 2 83 0 421 259 181 0 chr2 227037749 227037954 -26218629 + LTR16A LTR ERVL 209 450 0 275 302 38 28 chr2 227038208 227038314 -26218269 - MER5B DNA MER1_type -5 173 67 375 263 0 103 chr2 227038355 227038553 -26218030 - MIR SINE MIR -49 213 40 210 297 129 20 chr2 227038987 227039026 -26217557 - L2 LINE L2 -8 3264 3231 1312 181 89 37 chr2 227039026 227039352 -26217231 + MER2 DNA MER2_type 1 343 -1 210 297 129 20 chr2 227039352 227039413 -26217170 - L2 LINE L2 -41 3231 3153 705 326 88 65 chr2 227039684 227040491 -26216092 + L2 LINE L2 2443 3272 0 236 380 11 0 chr2 227040518 227040610 -26215973 - L2 LINE L2 -32 3240 3148 931 210 82 0 chr2 227041177 227041372 -26215211 + MER58A DNA MER1_type 14 224 0 659 160 38 0 chr2 227041376 227041507 -26215076 + MER105 DNA DNA 27 162 -42 5060 109 21 62 chr2 227042133 227042635 -26213948 + MER4D LTR ERV1 1 522 -350 2247 109 0 6 chr2 227042635 227042946 -26213637 + AluSg1 SINE Alu 1 309 0 5060 109 21 62 chr2 227042946 227043005 -26213578 + MER4D LTR ERV1 522 582 -290 5028 82 53 0 chr2 227043005 227043697 -26212886 - L1PA10 LINE L1 -4 6164 5436 5060 109 21 62 chr2 227043697 227044043 -26212540 + MER4D LTR ERV1 582 872 0 400 311 84 16 chr2 227044450 227044640 -26211943 + HAL1b LINE L1 599 801 -547 314 338 89 38 chr2 227045026 227045263 -26211320 - MIR SINE MIR -8 254 6 330 98 0 0 chr2 227045426 227045477 -26211106 + (TG)n Simple_repeat Simple_repeat 2 52 0 1822 84 13 4 chr2 227045650 227045887 -26210696 + AluSp SINE Alu 71 309 -4 758 88 0 0 chr2 227046033 227046135 -26210448 - L1PA14 LINE L1 -231 5930 5829 912 132 29 40 chr2 227046140 227046314 -26210269 + L1PA13 LINE L1 5992 6163 0 424 311 67 56 chr2 227046469 227047006 -26209577 + L1M4 LINE L1 2670 3212 -2934 403 148 34 11 chr2 227047662 227047750 -26208833 + L1MA10 LINE L1 6245 6334 0 184 136 51 0 chr2 227047847 227047906 -26208677 + (TAAA)n Simple_repeat Simple_repeat 3 64 0 1571 146 3 108 chr2 227048086 227048421 -26208162 - AluJo SINE Alu -2 300 1 330 261 35 70 chr2 227048432 227048547 -26208036 - MIR SINE MIR -131 131 21 216 273 15 15 chr2 227049995 227050061 -26206522 + CT-rich Low_complexity Low_complexity 5 70 0 302 248 83 15 chr2 227051076 227051209 -26205374 - L3 LINE CR1 -214 1363 1222 327 310 80 0 chr2 227051224 227051324 -26205259 + L2 LINE L2 3148 3255 -17 268 299 104 8 chr2 227051466 227051600 -26204983 - MIR SINE MIR -109 153 7 245 326 11 80 chr2 227052637 227052812 -26203771 - MIR SINE MIR -63 199 37 346 280 64 16 chr2 227055000 227055125 -26201458 + MIR3 SINE MIR 67 197 -11 568 100 0 0 chr2 227055292 227055372 -26201211 - MADE1 DNA Mariner 0 80 1 4490 180 37 35 chr2 227055718 227056695 -26199888 - MER45B DNA AcHobo -61 979 1 2416 232 20 4 chr2 227056839 227057386 -26199197 + MLT1F1 LTR MaLR 12 567 0 3824 210 67 47 chr2 227059475 227060732 -26195851 - L1MC4 LINE L1 -124 7918 6637 12759 125 26 72 chr2 227060732 227062069 -26194514 - Tigger1 DNA MER2_type 0 2418 1252 2362 74 34 3 chr2 227062069 227062365 -26194218 - AluSg1 SINE Alu -4 305 1 12759 125 26 72 chr2 227062365 227063562 -26193021 - Tigger1 DNA MER2_type -1166 1252 1 719 255 74 26 chr2 227063640 227064236 -26192347 - L1MC4 LINE L1 -1207 6601 6018 1757 194 140 12 chr2 227064238 227064754 -26191829 + MLT1E2 LTR MaLR 2 596 -30 1223 243 75 39 chr2 227064767 227065233 -26191350 - L1MC4a LINE L1 -1786 6022 5540 521 315 68 50 chr2 227065273 227066957 -26189626 - L1MC4a LINE L1 -1383 4763 3050 4414 122 40 4 chr2 227066957 227067660 -26188923 - L1PA14 LINE L1 -4 6157 5430 11954 201 16 4 chr2 227067660 227070082 -26186501 - L1PA14 LINE L1 -1301 4845 2389 2857 19 0 0 chr2 227070082 227070400 -26186183 - AluYb8 SINE Alu 0 318 1 11954 201 16 4 chr2 227070400 227070595 -26185988 - L1PA14 LINE L1 -3757 2389 2198 681 288 66 78 chr2 227070714 227071081 -26185502 - L1MC4a LINE L1 -3198 2948 2589 1387 158 135 4 chr2 227071081 227071341 -26185242 - AluSx SINE Alu -8 294 1 681 288 66 78 chr2 227071341 227071563 -26185020 - L1MC4a LINE L1 -3557 2589 2366 255 79 0 0 chr2 227071820 227071858 -26184725 + (T)n Simple_repeat Simple_repeat 1 38 0 25 31 0 0 chr2 227072145 227072177 -26184406 + AT_rich Low_complexity Low_complexity 1 32 0 355 270 130 70 chr2 227072714 227072801 -26183782 - L1MC4a LINE L1 -3748 2398 2318 2155 84 49 11 chr2 227072801 227073087 -26183496 - AluSg SINE Alu -13 297 1 355 270 130 70 chr2 227073087 227073269 -26183314 - L1MC4a LINE L1 -3828 2318 2113 395 264 8 8 chr2 227073409 227073530 -26183053 - HAL1b LINE L1 -701 647 527 207 0 0 0 chr2 227073552 227073575 -26183008 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 2421 40 0 0 chr2 227073881 227074155 -26182428 + AluY SINE Alu 24 297 -14 2024 151 0 0 chr2 227074747 227075046 -26181537 + AluSx SINE Alu 1 299 -13 24 32 0 0 chr2 227075078 227075109 -26181474 + AT_rich Low_complexity Low_complexity 1 31 0 22 80 0 0 chr2 227075573 227075623 -26180960 + AT_rich Low_complexity Low_complexity 1 50 0 503 96 78 0 chr2 227076165 227076332 -26180251 + (CA)n Simple_repeat Simple_repeat 1 180 0 582 64 55 0 chr2 227076369 227076478 -26180105 + (CA)n Simple_repeat Simple_repeat 2 116 0 318 186 0 0 chr2 227076955 227077025 -26179558 - MER53 DNA DNA -11 178 109 28 0 0 0 chr2 227077052 227077080 -26179503 + AT_rich Low_complexity Low_complexity 1 28 0 509 158 0 0 chr2 227077126 227077221 -26179362 + MER53 DNA DNA 95 189 0 1252 209 9 9 chr2 227077832 227078148 -26178435 + MER33 DNA MER1_type 9 324 0 296 242 40 20 chr2 227078160 227078259 -26178324 + Charlie7 DNA MER1_type 5 105 -2507 269 201 49 55 chr2 227078247 227078411 -26178172 + Charlie7 DNA MER1_type 2435 2597 -15 * 254 247 39 0 chr2 227079449 227079526 -26177057 + MER116 DNA Mariner 1 80 0 753 267 110 21 chr2 227079565 227079801 -26176782 + MIR SINE MIR 2 258 -4 326 307 59 7 chr2 227080761 227080914 -26175669 + MIR SINE MIR 21 181 -81 658 200 21 14 chr2 227081837 227081982 -26174601 - MER63A DNA MER1_type 0 210 65 4641 117 27 43 chr2 227087368 227087722 -26168861 - L1MA8 LINE L1 0 6291 5933 233 29 29 0 chr2 227087722 227087756 -26168827 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1819 178 0 10 chr2 227087758 227088051 -26168532 - AluJo SINE Alu -22 290 1 4641 117 27 43 chr2 227088051 227088461 -26168122 - L1MA8 LINE L1 -359 5932 5536 775 182 124 7 chr2 227089649 227089836 -26166747 + MIR SINE MIR 32 235 -27 2084 159 143 8 chr2 227089907 227090284 -26166299 - MSTA LTR MaLR 0 428 1 225 65 0 0 chr2 227090386 227090417 -26166166 + (CTATA)n Simple_repeat Simple_repeat 5 35 0 1905 150 150 53 chr2 227090423 227090875 -26165708 + LTR54B LTR ERV1 1 496 -2 208 267 80 76 chr2 227090929 227091154 -26165429 - L2 LINE L2 -788 2526 2301 2036 112 54 0 chr2 227091587 227091865 -26164718 + AluSc SINE Alu 1 293 -16 2101 137 0 3 chr2 227091912 227092211 -26164372 - AluSg SINE Alu -12 298 1 492 330 145 0 chr2 227092964 227093191 -26163392 + MIR SINE MIR 2 261 -1 980 282 48 50 chr2 227093271 227093647 -26162936 + LTR16C LTR ERVL 109 483 -8 277 340 33 20 chr2 227094549 227094699 -26161884 + MER5A DNA MER1_type 7 158 -31 308 200 154 0 chr2 227094714 227094779 -26161804 - MER81 DNA DNA -36 78 4 2039 254 57 31 chr2 227095344 227095920 -26160663 + MLT1E LTR MaLR 1 591 -2 656 47 28 9 chr2 227096849 227096955 -26159628 + (TAGA)n Simple_repeat Simple_repeat 4 111 0 263 246 0 18 chr2 227097010 227097067 -26159516 - MIR3 SINE MIR -15 193 138 5139 160 39 20 chr2 227097084 227097584 -26158999 - L1MB3 LINE L1 0 6183 5694 404 35 35 0 chr2 227097584 227097641 -26158942 + (TTTTA)n Simple_repeat Simple_repeat 2 60 0 2102 113 0 0 chr2 227097641 227097924 -26158659 - AluSx SINE Alu -29 283 1 5139 160 39 20 chr2 227097924 227098116 -26158467 - L1MB3 LINE L1 -489 5694 5507 180 0 0 0 chr2 227098116 227098136 -26158447 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 5139 160 39 20 chr2 227098136 227098706 -26157877 - L1MB3 LINE L1 -676 5507 4898 450 248 80 0 chr2 227098711 227098824 -26157759 - MIR SINE MIR -62 146 25 28 0 0 0 chr2 227098845 227098873 -26157710 + AT_rich Low_complexity Low_complexity 1 28 0 1445 229 95 81 chr2 227098966 227099524 -26157059 + MLT1F1 LTR MaLR 2 567 0 2460 183 70 114 chr2 227100095 227100856 -26155727 + LTR8A LTR ERV1 1 727 0 415 248 46 1 chr2 227101007 227101118 -26155465 + MIR SINE MIR 42 156 -67 227 186 443 0 chr2 227101239 227101309 -26155274 - MIR SINE MIR -115 147 47 339 331 50 0 chr2 227103870 227103991 -26152592 - MIR3 SINE MIR -1 207 81 275 151 0 38 chr2 227106329 227106382 -26150201 + MADE1 DNA Mariner 1 51 -29 312 271 14 0 chr2 227106395 227106465 -26150118 + L2 LINE L2 3199 3269 -3 1453 190 33 107 chr2 227106682 227107103 -26149480 - MLT1B LTR MaLR 0 390 1 571 304 51 53 chr2 227107106 227107511 -26149072 + MER115 DNA AcHobo 21 485 -208 566 219 23 0 chr2 227107507 227107635 -26148948 + Zaphod DNA AcHobo 3898 4028 -3 * 3506 196 59 3 chr2 227108907 227108991 -26147592 - L1MC3 LINE L1 -1 7784 7706 234 0 0 0 chr2 227108991 227109017 -26147566 + (CA)n Simple_repeat Simple_repeat 2 27 0 3506 196 59 3 chr2 227109017 227109658 -26146925 - L1MC3 LINE L1 -79 7706 7018 1574 199 95 21 chr2 227109709 227110045 -26146538 - MLT1A1 LTR MaLR 0 365 5 349 303 20 46 chr2 227110053 227110248 -26146335 - L1MC/D LINE L1 -2178 5630 5441 315 281 209 7 chr2 227110464 227110617 -26145966 - MIR3 SINE MIR -2 206 23 1780 183 34 29 chr2 227111246 227111595 -26144988 - MSTB LTR MaLR 0 426 76 1805 213 70 25 chr2 227111699 227112174 -26144409 - LTR53 LTR ERVL -2 517 22 592 247 94 1 chr2 227112674 227112866 -26143717 + MER58C DNA MER1_type 9 214 -1 2366 110 0 0 chr2 227113425 227113734 -26142849 + AluSc SINE Alu 1 309 0 183 359 9 47 chr2 227113735 227113841 -26142742 + L3b LINE CR1 1358 1459 -124 355 246 97 131 chr2 227114330 227114651 -26141932 - MLT1H LTR MaLR 0 549 240 2136 93 0 4 chr2 227114717 227115019 -26141564 + AluSc SINE Alu 1 301 0 219 239 106 4 chr2 227115109 227115225 -26141358 - MIR SINE MIR -37 225 50 303 346 29 15 chr2 227115588 227115724 -26140859 + MIR3 SINE MIR 69 206 -2 244 215 38 51 chr2 227116790 227116869 -26139714 - L2 LINE L2 0 3272 3195 2967 224 55 19 chr2 227117224 227117701 -26138882 - L1MC4 LINE L1 -859 7183 6664 288 0 0 0 chr2 227117701 227117733 -26138850 + (CA)n Simple_repeat Simple_repeat 2 33 0 2967 224 55 19 chr2 227117733 227118060 -26138523 - L1MC4 LINE L1 -1378 6664 6350 32 0 0 0 chr2 227118608 227118640 -26137943 + AT_rich Low_complexity Low_complexity 1 32 0 186 43 0 0 chr2 227119456 227119479 -26137104 + (CA)n Simple_repeat Simple_repeat 2 24 0 266 314 14 0 chr2 227119518 227119588 -26136995 - MER81 DNA DNA -42 72 2 1584 170 55 99 chr2 227120459 227120841 -26135742 - MLT1A1 LTR MaLR 0 365 1 3503 151 23 4 chr2 227121022 227121539 -26135044 - MER1A DNA MER1_type 0 527 1 292 257 14 0 chr2 227121759 227121829 -26134754 - MIR SINE MIR -123 139 69 235 217 0 0 chr2 227122900 227122946 -26133637 + (CAAAC)n Simple_repeat Simple_repeat 4 49 0 4498 164 63 8 chr2 227124197 227124980 -26131603 - LTR1B LTR ERV1 0 826 1 243 190 35 17 chr2 227126393 227126451 -26130132 - MLT1I LTR MaLR 0 409 351 219 290 11 11 chr2 227126735 227126828 -26129755 + A-rich Low_complexity Low_complexity 5 97 0 2041 143 0 19 chr2 227127971 227128286 -26128297 + AluSx SINE Alu 1 309 -3 1255 284 103 60 chr2 227129341 227130322 -26126261 + L1MEc LINE L1 872 1930 -4466 2693 166 5 31 chr2 227130322 227130533 -26126050 + Tigger2a DNA MER2_type 1 216 -2492 2517 73 0 0 chr2 227130533 227130833 -26125750 - AluY SINE Alu -11 300 1 2693 166 5 31 chr2 227130833 227131066 -26125517 + Tigger2a DNA MER2_type 216 433 -1 1255 284 103 60 chr2 227131066 227131466 -26125117 + L1MEc LINE L1 1930 2312 -4084 26 50 0 0 chr2 227131703 227131743 -26124840 + AT_rich Low_complexity Low_complexity 1 40 0 304 326 106 25 chr2 227132670 227132873 -26123710 - MIR SINE MIR -15 247 17 2205 106 3 19 chr2 227133143 227133455 -26123128 + AluSp SINE Alu 2 308 -5 268 262 0 16 chr2 227135427 227135488 -26121095 + MIR SINE MIR 15 74 -188 530 291 96 20 chr2 227135570 227135821 -26120762 - MLT2E LTR ERVL -2 626 357 531 290 42 28 chr2 227135891 227136108 -26120475 - MLT2E LTR ERVL -388 240 21 647 289 132 54 chr2 227136119 227136634 -26119949 + MLT1K LTR MaLR 32 586 -2 253 358 64 17 chr2 227137350 227137523 -26119060 + L3b LINE CR1 1272 1452 -131 407 345 95 23 chr2 227138516 227138820 -26117763 + LTR16C LTR ERVL 164 489 -2 434 364 65 53 chr2 227139868 227140286 -26116297 - L3 LINE CR1 -77 1500 1078 225 235 137 29 chr2 227140322 227140424 -26116159 - L3 LINE CR1 -626 951 839 3703 118 31 8 chr2 227141419 227141934 -26114649 - MER1A DNA MER1_type 0 527 1 5190 2 0 0 chr2 227143853 227144415 -26112168 + L1HS LINE L1 5592 6153 -2 294 205 0 0 chr2 227144967 227145050 -26111533 + (TGAA)n Simple_repeat Simple_repeat 3 85 0 728 293 120 50 chr2 227145154 227145619 -26110964 - L2 LINE L2 0 3313 2816 228 272 163 0 chr2 227145656 227145748 -26110835 - MIR SINE MIR 0 262 156 428 182 182 0 chr2 227146189 227146299 -26110284 + MER20 DNA MER1_type 90 219 0 285 253 195 19 chr2 227146646 227146800 -26109783 - L3b LINE CR1 -116 1467 1287 2760 189 111 84 chr2 227148107 227148912 -26107671 + LTR1B LTR ERV1 1 826 0 507 218 16 90 chr2 227149914 227150102 -26106481 - MER69A DNA AcHobo 0 177 4 1766 232 48 30 chr2 227150417 227150879 -26105704 - MLT1E LTR MaLR 0 593 124 499 207 193 20 chr2 227150889 227151039 -26105544 - MLT1E LTR MaLR -416 177 2 998 319 106 8 chr2 227151512 227152133 -26104450 - L1ME3A LINE L1 -225 6181 5500 943 114 0 36 chr2 227152311 227152451 -26104132 + FRAM SINE Alu 38 172 -4 272 229 54 72 chr2 227152539 227152705 -26103878 + L1M4 LINE L1 4524 4686 -1460 182 247 11 0 chr2 227152755 227152848 -26103735 + (TA)n Simple_repeat Simple_repeat 1 94 0 28 71 0 0 chr2 227152879 227152935 -26103648 + AT_rich Low_complexity Low_complexity 1 56 0 188 163 23 0 chr2 227152955 227152998 -26103585 + (TATATG)n Simple_repeat Simple_repeat 3 46 0 418 286 87 31 chr2 227153012 227153334 -26103249 - L1ME3A LINE L1 -2198 4184 3845 448 236 55 111 chr2 227153571 227154140 -26102443 - L1ME3A LINE L1 -2672 3710 3174 327 274 51 45 chr2 227154227 227154351 -26102232 - L1ME3A LINE L1 -3196 3186 3064 2162 112 20 13 chr2 227154351 227154654 -26101929 - AluSx SINE Alu -7 305 1 327 274 51 45 chr2 227154654 227154861 -26101722 - L1ME3A LINE L1 -3318 3064 2853 24 0 0 0 chr2 227155083 227155107 -26101476 + AT_rich Low_complexity Low_complexity 1 24 0 440 284 52 79 chr2 227155239 227155490 -26101093 - L1MEc LINE L1 -3705 2677 2471 1486 181 23 27 chr2 227155490 227155789 -26100794 - AluJo SINE Alu -14 298 1 440 284 52 79 chr2 227155789 227156008 -26100575 - L1MEc LINE L1 -3911 2471 2248 328 278 89 11 chr2 227156270 227156360 -26100223 + MER5B DNA MER1_type 1 97 -81 347 276 76 34 chr2 227156498 227156838 -26099745 - L1M2 LINE L1 -4273 2110 1389 340 107 0 54 chr2 227156871 227156927 -26099656 - MLT2B2 LTR ERVL 0 515 463 * 1929 108 10 30 chr2 227156920 227157215 -26099368 + THE1C LTR MaLR 87 375 0 643 263 116 21 chr2 227157218 227157503 -26099080 - L1MEd LINE L1 -4913 1206 895 186 71 0 0 chr2 227157532 227157560 -26099023 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 616 279 6 27 chr2 227158557 227158740 -26097843 - MIR SINE MIR -50 212 34 1264 178 9 14 chr2 227158948 227159167 -26097416 - MER20 DNA MER1_type 0 219 2 243 339 8 16 chr2 227159510 227159637 -26096946 - MIR SINE MIR -71 191 66 1581 124 0 18 chr2 227159649 227159875 -26096708 - AluSg/x SINE Alu -23 289 68 260 274 55 161 chr2 227159990 227160264 -26096319 - L2 LINE L2 -43 3229 2985 2434 169 15 46 chr2 227160463 227160942 -26095641 - MLT2C2 LTR ERVL 0 464 1 21 0 0 0 chr2 227162462 227162483 -26094100 + AT_rich Low_complexity Low_complexity 1 21 0 464 243 233 9 chr2 227162545 227162755 -26093828 + MIR SINE MIR 6 262 0 3747 135 56 39 chr2 227162785 227163408 -26093175 - MER51A LTR ERV1 0 634 1 291 28 0 0 chr2 227163974 227164010 -26092573 + (CA)n Simple_repeat Simple_repeat 2 37 0 204 97 0 0 chr2 227164582 227164613 -26091970 + (TTG)n Simple_repeat Simple_repeat 2 32 0 1591 162 45 24 chr2 227164967 227165257 -26091326 - AluJo SINE Alu -16 296 1 1300 200 95 49 chr2 227165410 227165840 -26090743 - LTR7 LTR ERV1 0 450 1 228 354 97 21 chr2 227166337 227166481 -26090102 + L3 LINE CR1 1373 1527 -50 204 306 10 20 chr2 227166544 227166642 -26089941 + GA-rich Low_complexity Low_complexity 4 100 0 2372 99 0 10 chr2 227166734 227167047 -26089536 - AluSx SINE Alu -2 310 1 1046 308 42 35 chr2 227167771 227168177 -26088406 - MLT1I LTR MaLR 0 409 1 524 296 49 6 chr2 227169659 227169821 -26086762 - MIR SINE MIR -68 194 26 1054 188 0 96 chr2 227169851 227170091 -26086492 + MER20 DNA MER1_type 1 217 -2 26 30 0 0 chr2 227170460 227170493 -26086090 + AT_rich Low_complexity Low_complexity 1 33 0 383 271 43 29 chr2 227170525 227170665 -26085918 - MIR3 SINE MIR -35 173 32 210 71 0 0 chr2 227171174 227171202 -26085381 + (A)n Simple_repeat Simple_repeat 1 28 0 185 134 45 15 chr2 227171651 227171718 -26084865 + (TA)n Simple_repeat Simple_repeat 1 69 0 2571 151 45 103 chr2 227173545 227173710 -26082873 + L1MA9 LINE L1 5693 5866 -446 194 79 0 26 chr2 227173710 227173748 -26082835 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 899 193 13 0 chr2 227173749 227173899 -26082684 - FRAM SINE Alu -14 152 1 2571 151 45 103 chr2 227173899 227174355 -26082228 + L1MA9 LINE L1 5865 6280 -32 25 31 0 0 chr2 227174355 227174387 -26082196 + AT_rich Low_complexity Low_complexity 1 32 0 1858 158 0 25 chr2 227174437 227174903 -26081680 + AluJo SINE Alu 1 458 0 457 294 52 63 chr2 227175295 227175512 -26081071 + MLT1J LTR MaLR 246 461 -50 2223 120 0 0 chr2 227175512 227175812 -26080771 + AluSq SINE Alu 1 300 -13 457 294 52 63 chr2 227175812 227175863 -26080720 + MLT1J LTR MaLR 461 511 0 205 275 47 109 chr2 227176572 227176765 -26079818 - L2 LINE L2 -274 2998 2818 184 423 6 6 chr2 227177106 227177269 -26079314 - L2 LINE L2 -997 2317 2155 311 244 16 63 chr2 227177609 227177736 -26078847 - L2 LINE L2 0 3313 3193 324 19 57 0 chr2 227178059 227178112 -26078471 + (TAGA)n Simple_repeat Simple_repeat 1 56 0 20222 183 21 9 chr2 227178159 227184879 -26071704 - L1PA13 LINE L1 -1 6813 1 212 179 0 0 chr2 227184968 227185007 -26071576 + (TAA)n Simple_repeat Simple_repeat 1 39 0 517 273 26 102 chr2 227185008 227185130 -26071453 - MIR SINE MIR 0 262 169 2028 141 0 7 chr2 227185130 227185434 -26071149 - AluSx SINE Alu -10 302 1 517 273 26 102 chr2 227185434 227185575 -26071008 - MIR SINE MIR -93 169 19 205 364 121 0 chr2 227186453 227186552 -26070031 - L2 LINE L2 -4 3309 3199 287 303 90 0 chr2 227187358 227187480 -26069103 - L2 LINE L2 -212 3060 2928 463 388 37 7 chr2 227187565 227187864 -26068719 - L2 LINE L2 -518 2796 2489 1654 121 5 0 chr2 227187873 227188097 -26068486 + AluSx SINE Alu 1 225 -87 836 101 0 0 chr2 227188097 227188206 -26068377 + AluSp/q SINE Alu 188 296 -17 343 310 158 16 chr2 227188216 227188295 -26068288 - L2 LINE L2 -836 2478 2412 1678 201 84 9 chr2 227188295 227188639 -26067944 + MLT1A2 LTR MaLR 5 374 0 343 310 158 16 chr2 227188639 227188882 -26067701 - L2 LINE L2 -902 2412 2110 292 286 55 85 chr2 227189137 227189316 -26067267 - MIR SINE MIR -59 149 21 1319 101 0 0 chr2 227190051 227190219 -26066364 + AluY SINE Alu 131 298 -13 566 301 24 14 chr2 227190585 227190794 -26065789 + MLT1K LTR MaLR 306 516 -72 347 145 14 0 chr2 227191667 227191736 -26064847 + (CA)n Simple_repeat Simple_repeat 1 70 0 262 305 0 32 chr2 227194670 227194687 -26061896 + MIR SINE MIR 32 48 -160 192 77 0 0 chr2 227194687 227194713 -26061870 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 262 305 0 32 chr2 227194713 227194790 -26061793 + MIR SINE MIR 48 124 -84 184 115 0 0 chr2 227194781 227194807 -26061776 - MIR3 SINE MIR -34 174 149 * 234 91 0 0 chr2 227195380 227195413 -26061170 + (TC)n Simple_repeat Simple_repeat 1 33 0 368 208 50 42 chr2 227195619 227195739 -26060844 - MIR3 SINE MIR -7 201 81 771 135 0 0 chr2 227196988 227197121 -26059462 + (CAT)n Simple_repeat Simple_repeat 2 134 0 374 287 47 8 chr2 227197135 227197264 -26059319 - MIR SINE MIR -10 252 119 860 181 88 15 chr2 227198533 227198737 -26057846 + MLT1D LTR MaLR 6 224 -281 365 278 122 86 chr2 227198749 227198994 -26057589 + L2 LINE L2 3017 3270 -2 261 294 50 17 chr2 227200793 227200912 -26055671 - MER115 DNA AcHobo -259 434 312 276 330 26 0 chr2 227201019 227201134 -26055449 - MER115 DNA AcHobo -537 156 39 499 285 42 29 chr2 227201751 227201944 -26054639 - MLT1I LTR MaLR -133 276 100 221 286 71 31 chr2 227202143 227202241 -26054342 + L2 LINE L2 3138 3239 -33 296 251 48 116 chr2 227202325 227202532 -26054051 - L2 LINE L2 -913 2401 2209 2125 88 15 0 chr2 227202647 227202921 -26053662 - AluY SINE Alu -13 298 21 459 298 75 26 chr2 227203190 227203418 -26053165 - MIR SINE MIR -16 246 8 1172 194 97 33 chr2 227203772 227204071 -26052512 + MLT1A1 LTR MaLR 48 365 0 278 315 9 19 chr2 227204197 227204305 -26052278 - MIR SINE MIR -109 153 47 391 261 185 38 chr2 227205381 227205592 -26050991 - MIR SINE MIR -1 261 20 284 285 86 93 chr2 227206293 227206595 -26049988 + L2 LINE L2 2971 3270 -2 282 235 20 20 chr2 227206970 227207068 -26049515 + (TAGA)n Simple_repeat Simple_repeat 1 98 0 318 50 0 0 chr2 227207480 227207520 -26049063 + (TG)n Simple_repeat Simple_repeat 2 41 0 576 0 0 0 chr2 227208003 227208067 -26048516 + (TC)n Simple_repeat Simple_repeat 2 65 0 228 86 0 0 chr2 227208075 227208110 -26048473 + (CA)n Simple_repeat Simple_repeat 2 36 0 2323 103 0 7 chr2 227208120 227208430 -26048153 - AluSg SINE Alu 0 310 3 1052 251 179 32 chr2 227208888 227209648 -26046935 - L2 LINE L2 -6 3307 2425 22 0 0 0 chr2 227210096 227210118 -26046465 + AT_rich Low_complexity Low_complexity 1 22 0 990 274 169 9 chr2 227210175 227210606 -26045977 - LTR33A LTR ERVL -21 502 3 7431 49 1 3 chr2 227210654 227212341 -26044242 + L1PA5 LINE L1 4470 6154 0 208 324 130 28 chr2 227212341 227212449 -26044134 - L2 LINE L2 -252 3061 2943 269 319 159 40 chr2 227213193 227213514 -26043069 - L2 LINE L2 -420 2894 2498 2516 150 24 12 chr2 227213514 227213935 -26042648 - MSTB LTR MaLR 0 426 1 269 319 159 40 chr2 227213935 227214086 -26042497 - L2 LINE L2 -816 2498 2366 200 296 0 0 chr2 227214646 227214700 -26041883 + MIR3 SINE MIR 117 170 -38 450 0 0 0 chr2 227214880 227214930 -26041653 + (TCTA)n Simple_repeat Simple_repeat 3 52 0 962 213 59 68 chr2 227215682 227216006 -26040577 + MER33 DNA MER1_type 2 322 -2 2435 124 107 18 chr2 227217108 227217566 -26039017 - L1MC2 LINE L1 0 6344 5846 1151 310 55 5 chr2 227219418 227219799 -26036784 + MLT1K LTR MaLR 20 419 -169 468 179 0 32 chr2 227219840 227219935 -26036648 - MER53 DNA DNA -95 94 3 1883 123 13 69 chr2 227221026 227221344 -26035239 - AluSx SINE Alu -12 300 1 195 162 0 0 chr2 227221863 227221900 -26034683 + (TA)n Simple_repeat Simple_repeat 1 37 0 24 0 0 0 chr2 227222200 227222224 -26034359 + AT_rich Low_complexity Low_complexity 1 24 0 1180 174 34 4 chr2 227222356 227222592 -26033991 - L1MB1 LINE L1 -1 6167 5925 2178 135 76 9 chr2 227222593 227222934 -26033649 - THE1B LTR MaLR 0 364 1 11496 92 27 1 chr2 227222934 227224474 -26032109 - THE1B-int LTR MaLR 0 1580 1 2187 132 76 12 chr2 227224474 227224816 -26031767 - THE1B LTR MaLR 0 364 1 523 246 14 0 chr2 227224853 227224991 -26031592 + LTR37A LTR ERV1 267 406 -20 285 284 121 14 chr2 227227449 227227590 -26028993 - MIR SINE MIR -5 257 102 2264 104 0 3 chr2 227227966 227228292 -26028291 - AluSx SINE Alu 0 312 1 210 159 0 23 chr2 227228305 227228349 -26028234 - MIR SINE MIR -46 216 174 237 227 34 101 chr2 227228356 227228475 -26028108 + MIR SINE MIR 151 261 -1 1742 194 8 70 chr2 227229944 227230346 -26026237 + MLT1B LTR MaLR 4 380 -10 190 353 0 29 chr2 227231051 227231119 -26025464 - L3 LINE CR1 -99 1478 1413 202 295 40 0 chr2 227231631 227231780 -26024803 + GA-rich Low_complexity Low_complexity 5 159 0 * 219 305 53 0 chr2 227231681 227231812 -26024771 + (CAGGG)n Simple_repeat Simple_repeat 4 141 0 2070 91 0 0 chr2 227232237 227232500 -26024083 - AluY SINE Alu -10 301 39 343 295 150 10 chr2 227232533 227232733 -26023850 - MIR SINE MIR -16 246 19 362 216 0 0 chr2 227233563 227233651 -26022932 - MIR SINE MIR 0 262 175 528 288 176 26 chr2 227233716 227234102 -26022481 + LTR33 LTR ERVL 76 519 -2 343 326 45 17 chr2 227234268 227234446 -26022137 - L1MC/D LINE L1 -2052 5756 5574 239 224 2 198 chr2 227234441 227234607 -26021976 + L1ME LINE L1 5573 5711 -451 * 189 0 0 0 chr2 227234608 227234629 -26021954 + (TTTTA)n Simple_repeat Simple_repeat 3 23 0 385 283 14 87 chr2 227234993 227235212 -26021371 - L1MC/D LINE L1 -2216 5592 5390 195 129 0 0 chr2 227235666 227235697 -26020886 + (T)n Simple_repeat Simple_repeat 1 31 0 410 210 220 12 chr2 227236299 227236458 -26020125 - MIR SINE MIR -28 180 15 241 260 27 14 chr2 227236661 227236734 -26019849 - L1MC5 LINE L1 -37 7924 7851 464 259 77 7 chr2 227237017 227237160 -26019423 - MIR SINE MIR 0 262 110 401 284 165 16 chr2 227237171 227237365 -26019218 - MIR SINE MIR -6 256 34 311 219 80 93 chr2 227238446 227238597 -26017986 - MIR SINE MIR -34 228 80 777 211 13 0 chr2 227238883 227239039 -26017544 + MIR SINE MIR 5 162 -100 2680 58 0 0 chr2 227239235 227239543 -26017040 + AluY SINE Alu 1 308 -3 302 368 44 17 chr2 227239924 227240220 -26016363 - L1ME3A LINE L1 -230 5940 5637 2454 67 0 13 chr2 227240650 227240950 -26015633 - AluY SINE Alu 0 311 16 4577 73 11 0 chr2 227241268 227241816 -26014767 - MER41A LTR ERV1 0 554 1 405 320 73 76 chr2 227241931 227242259 -26014324 + L2 LINE L2 2940 3266 -6 243 0 0 0 chr2 227243132 227243159 -26013424 + (TG)n Simple_repeat Simple_repeat 2 28 0 1002 161 19 0 chr2 227244170 227244332 -26012251 - AluSg/x SINE Alu -1 311 147 548 310 42 14 chr2 227246222 227246438 -26010145 + L2 LINE L2 2918 3139 -174 6985 233 60 45 chr2 227246467 227247019 -26009564 + L1ME1 LINE L1 2894 3436 -2730 1997 198 57 41 chr2 227247019 227247438 -26009145 - MSTB LTR MaLR 0 426 1 6985 233 60 45 chr2 227247438 227249000 -26007583 + L1ME1 LINE L1 3436 5065 -1101 728 35 0 0 chr2 227249000 227249085 -26007498 + L1PA3 LINE L1 6071 6155 0 6985 233 60 45 chr2 227249085 227249927 -26006656 + L1ME1 LINE L1 5065 5893 -273 243 325 70 70 chr2 227252384 227252541 -26004042 - MIR3 SINE MIR -12 196 40 1311 197 20 30 chr2 227252670 227252970 -26003613 + AluJo SINE Alu 2 298 -14 285 75 0 0 chr2 227252976 227253016 -26003567 + (TAAA)n Simple_repeat Simple_repeat 4 43 0 187 220 176 33 chr2 227254581 227254672 -26001911 - MIR SINE MIR -70 192 89 349 250 39 10 chr2 227254683 227254787 -26001796 + L2 LINE L2 2750 2856 -458 532 221 160 11 chr2 227254812 227254993 -26001590 - LTR37A LTR ERV1 0 426 219 6086 260 52 11 chr2 227255030 227256963 -25999620 + L1MB8 LINE L1 3220 5231 -915 1756 186 9 68 chr2 227256978 227257407 -25999176 + L1MB8 LINE L1 5773 6176 -2 406 253 66 56 chr2 227257426 227257624 -25998959 - LTR37A LTR ERV1 -208 218 19 383 364 6 12 chr2 227257667 227257829 -25998754 + L2 LINE L2 2898 3058 -255 2205 216 113 4 chr2 227257830 227258335 -25998248 - MLT1F1 LTR MaLR 0 567 8 190 290 137 44 chr2 227258377 227258560 -25998023 + L2 LINE L2 3099 3298 -15 328 321 62 9 chr2 227260233 227260345 -25996238 - MIR3 SINE MIR -9 199 82 271 316 165 37 chr2 227260489 227260919 -25995664 - L2 LINE L2 -824 2490 2006 228 239 0 30 chr2 227261284 227261351 -25995232 + GA-rich Low_complexity Low_complexity 2 66 0 222 196 161 0 chr2 227263624 227263680 -25992903 + MIR SINE MIR 78 142 -66 231 88 0 0 chr2 227264825 227264859 -25991724 + (TC)n Simple_repeat Simple_repeat 2 35 0 186 118 0 0 chr2 227264859 227264893 -25991690 + (CA)n Simple_repeat Simple_repeat 1 34 0 595 86 0 12 chr2 227264926 227265007 -25991576 + MADE1 DNA Mariner 1 80 0 367 264 154 45 chr2 227265085 227265467 -25991116 - HAL1b LINE L1 -6 1342 919 2287 115 0 0 chr2 227267668 227267973 -25988610 + AluSx SINE Alu 1 305 -7 26 0 0 0 chr2 227268618 227268644 -25987939 + AT_rich Low_complexity Low_complexity 1 26 0 706 264 87 22 chr2 227270718 227270962 -25985621 - MLT1L LTR MaLR -7 608 342 2505 149 6 0 chr2 227270962 227271325 -25985258 + MLT1A1 LTR MaLR 1 365 0 706 264 87 22 chr2 227271325 227271357 -25985226 - MLT1L LTR MaLR -273 342 314 322 321 87 72 chr2 227271381 227271646 -25984937 - MLT1L LTR MaLR -345 270 2 357 313 31 16 chr2 227271779 227271907 -25984676 + MIR SINE MIR 2 131 -131 665 283 74 4 chr2 227271922 227272057 -25984526 - MIR SINE MIR 0 262 138 1749 189 0 0 chr2 227272057 227272358 -25984225 + AluJo SINE Alu 1 301 -11 665 283 74 4 chr2 227272358 227272466 -25984117 - MIR SINE MIR -124 138 2 509 124 10 41 chr2 227272497 227272594 -25983989 - LTR9 LTR ERV1 -81 531 438 2168 94 0 97 chr2 227273617 227273969 -25982614 - AluYb8 SINE Alu 0 318 1 2160 154 45 0 chr2 227274024 227274355 -25982228 - MER7A DNA MER2_type 0 346 3 521 320 76 20 chr2 227274636 227275030 -25981553 - HAL1 LINE L1 -824 1683 1268 1641 218 27 35 chr2 227275192 227275596 -25980987 - MLT2D LTR ERVL -12 402 2 228 305 6 42 chr2 227275726 227275893 -25980690 + T-rich Low_complexity Low_complexity 4 164 0 2156 157 14 30 chr2 227276037 227276407 -25980176 - THE1B LTR MaLR 0 364 1 1247 280 179 5 chr2 227276877 227277313 -25979270 - LTR33 LTR ERVL -5 516 5 214 328 109 58 chr2 227277349 227277697 -25978886 + L2 LINE L2 1687 2052 -1262 220 301 48 110 chr2 227280336 227280468 -25976115 - L2 LINE L2 -8 3305 3166 1629 180 0 46 chr2 227280468 227280795 -25975788 + AluJo SINE Alu 1 312 0 220 301 48 110 chr2 227280795 227280879 -25975704 - L2 LINE L2 -147 3166 3078 2279 96 0 0 chr2 227280879 227281172 -25975411 + AluSc SINE Alu 4 296 -13 220 301 48 110 chr2 227281172 227281353 -25975230 - L2 LINE L2 -235 3078 2932 3886 116 18 0 chr2 227281367 227281911 -25974672 - MER41A LTR ERV1 0 554 1 423 78 0 0 chr2 227282107 227282171 -25974412 + (TG)n Simple_repeat Simple_repeat 1 64 0 396 274 146 6 chr2 227282517 227282681 -25973902 + MIR3 SINE MIR 3 189 -19 183 42 0 0 chr2 227283211 227283235 -25973348 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 727 130 0 28 chr2 227283239 227283347 -25973236 - FLAM_C SINE Alu -26 117 13 411 259 43 0 chr2 227283939 227284055 -25972528 + L2 LINE L2 3187 3307 -6 386 326 22 22 chr2 227284879 227285014 -25971569 - L2 LINE L2 -1 3271 3137 241 291 66 66 chr2 227285347 227285498 -25971085 - L2 LINE L2 -437 2877 2727 243 236 9 82 chr2 227287177 227287287 -25969296 + HAL1b LINE L1 748 849 -499 47 44 0 0 chr2 227289415 227289483 -25967100 + AT_rich Low_complexity Low_complexity 1 68 0 307 252 19 39 chr2 227289515 227289618 -25966965 + L1MC4a LINE L1 5833 5933 -1875 369 0 0 0 chr2 227289720 227289761 -25966822 + (CA)n Simple_repeat Simple_repeat 2 42 0 639 71 0 0 chr2 227289850 227289935 -25966648 + (TA)n Simple_repeat Simple_repeat 2 86 0 351 0 0 0 chr2 227290042 227290081 -25966502 + (TG)n Simple_repeat Simple_repeat 2 40 0 2789 106 5 13 chr2 227290082 227290460 -25966123 + THE1C LTR MaLR 1 375 0 328 254 0 0 chr2 227291901 227291972 -25964611 - MIR3 SINE MIR -24 184 114 825 248 128 29 chr2 227292180 227292670 -25963913 - MLT1G3 LTR MaLR 0 555 1 180 231 51 0 chr2 227293986 227294025 -25962558 - L3 LINE CR1 -4 1573 1533 271 202 24 24 chr2 227294217 227294301 -25962282 + (CAGAGA)n Simple_repeat Simple_repeat 6 89 0 212 200 44 0 chr2 227294369 227294459 -25962124 + GA-rich Low_complexity Low_complexity 2 95 0 249 217 14 29 chr2 227294528 227294597 -25961986 + GA-rich Low_complexity Low_complexity 2 69 0 244 219 25 151 chr2 227295843 227295962 -25960621 + MER5A DNA MER1_type 52 155 -34 214 322 11 33 chr2 227295893 227295983 -25960600 - MER5A DNA MER1_type -78 111 24 * 247 325 150 8 chr2 227296027 227296147 -25960436 - MIR SINE MIR -56 152 16 260 109 0 22 chr2 227296238 227296284 -25960299 + (ATG)n Simple_repeat Simple_repeat 1 45 0 515 265 228 6 chr2 227296317 227296479 -25960104 - MIR SINE MIR -21 241 44 756 289 73 56 chr2 227298617 227299028 -25957555 + MLT1J LTR MaLR 1 418 -93 334 222 0 33 chr2 227299081 227299171 -25957412 - MLT1J LTR MaLR -8 503 417 217 235 20 0 chr2 227299885 227299936 -25956647 + GA-rich Low_complexity Low_complexity 2 53 0 288 0 0 0 chr2 227300110 227300142 -25956441 + (TG)n Simple_repeat Simple_repeat 2 33 0 354 275 0 12 chr2 227303011 227303091 -25953492 - MER5A DNA MER1_type -48 141 63 2104 139 0 0 chr2 227303113 227303416 -25953167 - AluSx SINE Alu -9 303 1 21 0 0 0 chr2 227303439 227303460 -25953123 + AT_rich Low_complexity Low_complexity 1 21 0 273 342 53 0 chr2 227305223 227305337 -25951246 + MIR3 SINE MIR 85 204 -4 650 308 56 19 chr2 227306162 227306428 -25950155 - L3 LINE CR1 -4 1573 1298 289 326 11 0 chr2 227306704 227306796 -25949787 + L2 LINE L2 3180 3272 0 288 329 13 27 chr2 227308000 227308149 -25948434 - MIR SINE MIR -70 192 46 854 272 138 34 chr2 227308523 227308994 -25947589 + LTR33A LTR ERVL 4 523 0 891 201 58 16 chr2 227309103 227309292 -25947291 + MER63A DNA MER1_type 1 197 -13 381 304 101 7 chr2 227309665 227309813 -25946770 - MIR3 SINE MIR -8 200 39 420 325 151 34 chr2 227309819 227310170 -25946413 - L2 LINE L2 0 3313 2922 190 278 111 11 chr2 227311122 227311212 -25945371 + MIR SINE MIR 56 154 -108 255 204 43 109 chr2 227313314 227313525 -25943058 - L1M4 LINE L1 -1639 4507 4311 379 304 89 32 chr2 227315284 227315341 -25941242 - MIR3 SINE MIR 0 208 156 519 279 54 66 chr2 227315341 227315674 -25940909 + MER102a DNA MER1_type 2 330 0 379 304 89 32 chr2 227315674 227315774 -25940809 - MIR3 SINE MIR -52 156 42 22 0 0 0 chr2 227316157 227316179 -25940404 + AT_rich Low_complexity Low_complexity 1 22 0 376 280 25 40 chr2 227317318 227317715 -25938868 + L1M4 LINE L1 4915 5305 -841 1211 207 45 125 chr2 227317719 227318351 -25938232 + L1MC/D LINE L1 1508 2065 -4475 415 208 13 0 chr2 227318389 227318466 -25938117 + Tigger3(Golem) DNA MER2_type 3 80 -2949 191 113 65 0 chr2 227318590 227318652 -25937931 + (TA)n Simple_repeat Simple_repeat 1 66 0 536 237 44 7 chr2 227318667 227318802 -25937781 + Tigger3(Golem) DNA MER2_type 2890 3029 0 489 202 107 89 chr2 227318972 227319140 -25937443 - MLT1E3 LTR MaLR -390 234 64 472 184 14 78 chr2 227319044 227319185 -25937398 - MLT2C1 LTR ERVL -265 132 1 * 3106 238 64 54 chr2 227319395 227320933 -25935650 + L1MC/D LINE L1 2391 3911 -2629 777 281 99 11 chr2 227320929 227321384 -25935199 + L1MC/D LINE L1 5698 6192 -2010 * 618 231 186 18 chr2 227322760 227322981 -25933602 - MIR SINE MIR 0 262 5 407 300 31 15 chr2 227323013 227323147 -25933436 - MIR SINE MIR -37 171 34 22 0 0 0 chr2 227323446 227323468 -25933115 + AT_rich Low_complexity Low_complexity 1 22 0 313 385 52 0 chr2 227323782 227323917 -25932666 - MIR3 SINE MIR -18 190 49 535 342 25 12 chr2 227324067 227324310 -25932273 + MIR SINE MIR 14 259 -3 22 0 0 0 chr2 227325177 227325199 -25931384 + AT_rich Low_complexity Low_complexity 1 22 0 1266 87 0 0 chr2 227325887 227326060 -25930523 - L1PA13 LINE L1 0 6163 5991 1770 75 19 30 chr2 227326212 227326478 -25930105 - L1PA13 LINE L1 -178 5990 5728 22 0 0 0 chr2 227327673 227327695 -25928888 + AT_rich Low_complexity Low_complexity 1 22 0 827 169 0 22 chr2 227327716 227327852 -25928731 + FLAM_C SINE Alu 1 133 0 183 42 0 0 chr2 227327875 227327899 -25928684 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 199 316 0 53 chr2 227328968 227329044 -25927539 + MIR SINE MIR 20 91 -171 3357 182 11 65 chr2 227329056 227329362 -25927221 - MER72 LTR ERV1 0 722 401 3522 74 0 8 chr2 227329362 227329833 -25926750 + L1PA8 LINE L1 5704 6170 -2 3357 182 11 65 chr2 227329833 227330290 -25926293 - MER72 LTR ERV1 -321 401 1 274 216 54 14 chr2 227330308 227330382 -25926201 + MIR SINE MIR 131 207 -55 2362 151 55 61 chr2 227330946 227331659 -25924924 + MER51A LTR ERV1 1 634 0 1125 233 58 16 chr2 227332013 227332326 -25924257 + L1M4 LINE L1 403 728 -5814 * 1776 191 40 14 chr2 227332323 227332753 -25923830 + L1MB7 LINE L1 5728 6168 -16 228 100 0 0 chr2 227332778 227332818 -25923765 + (A)n Simple_repeat Simple_repeat 1 40 0 2265 108 0 3 chr2 227332822 227333118 -25923465 + AluSx SINE Alu 2 296 -16 368 303 99 19 chr2 227333248 227333459 -25923124 + LTR33 LTR ERVL 294 521 0 252 330 26 17 chr2 227334025 227334140 -25922443 + L2 LINE L2 2691 2806 -508 260 308 90 0 chr2 227334336 227334414 -25922169 - L2 LINE L2 0 3272 3188 1275 272 65 51 chr2 227335151 227335592 -25920991 - L1MC4 LINE L1 -116 7926 7470 4147 139 28 0 chr2 227335592 227336305 -25920278 - L1MA8 LINE L1 -3 6288 5556 1275 272 65 51 chr2 227336305 227336554 -25920029 - L1MC4 LINE L1 -572 7470 7226 604 259 51 15 chr2 227336663 227336860 -25919723 - L1MC4 LINE L1 -1000 7042 6839 416 323 146 4 chr2 227336896 227337122 -25919461 - L1MC4 LINE L1 -1432 6610 6353 1039 250 98 69 chr2 227337180 227337612 -25918971 - L1MC4a LINE L1 -1543 6265 5847 2287 89 0 0 chr2 227337612 227337893 -25918690 - AluSc SINE Alu -28 281 1 1039 250 98 69 chr2 227337893 227338061 -25918522 - L1MC4a LINE L1 -1961 5847 5685 207 0 0 0 chr2 227338061 227338084 -25918499 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1039 250 98 69 chr2 227338084 227338207 -25918376 - L1MC4a LINE L1 -2123 5685 5520 655 152 0 0 chr2 227338207 227338312 -25918271 + MLT1B LTR MaLR 1 105 -285 549 189 0 0 chr2 227338313 227338419 -25918164 + MLT1B LTR MaLR 285 390 0 497 250 67 12 chr2 227338419 227338583 -25918000 - L1MC4a LINE L1 -2288 5520 5348 990 299 73 63 chr2 227338703 227340673 -25915910 - L1MC4a LINE L1 -987 5159 3210 2699 98 3 13 chr2 227340673 227341052 -25915531 - THE1C LTR MaLR 0 375 1 990 299 73 63 chr2 227341052 227341460 -25915123 - L1MC4a LINE L1 -2936 3210 2739 2160 186 11 11 chr2 227341460 227341821 -25914762 + MLT1A1 LTR MaLR 5 365 0 990 299 73 63 chr2 227341821 227341930 -25914653 - L1MC4a LINE L1 -3407 2739 2633 30 0 0 0 chr2 227342133 227342163 -25914420 + AT_rich Low_complexity Low_complexity 1 30 0 478 273 15 35 chr2 227342759 227342957 -25913626 - HAL1b LINE L1 -938 410 217 186 191 29 15 chr2 227344074 227344142 -25912441 + (TATG)n Simple_repeat Simple_repeat 2 70 0 300 312 135 0 chr2 227344259 227344400 -25912183 + MIR3 SINE MIR 37 196 -12 23 0 0 0 chr2 227344834 227344857 -25911726 + AT_rich Low_complexity Low_complexity 1 23 0 676 197 4 9 chr2 227345397 227345640 -25910943 + (CA)n Simple_repeat Simple_repeat 1 241 0 261 196 0 0 chr2 227345641 227345692 -25910891 - MER4-int LTR ERV1 -5437 1161 1111 246 156 0 0 chr2 227345692 227345737 -25910846 + (CA)n Simple_repeat Simple_repeat 2 46 0 2436 87 0 10 chr2 227346403 227346714 -25909869 - AluSg SINE Alu -2 308 1 490 295 46 6 chr2 227347252 227347425 -25909158 + MIR SINE MIR 83 262 0 21 0 0 0 chr2 227347433 227347454 -25909129 + AT_rich Low_complexity Low_complexity 1 21 0 499 335 6 0 chr2 227347702 227347860 -25908723 + MIR3 SINE MIR 30 188 -20 877 102 24 0 chr2 227348924 227349051 -25907532 - L1MA6 LINE L1 0 6300 6171 4084 151 24 6 chr2 227349051 227349247 -25907336 + L1 LINE L1 4289 4480 -1666 2496 77 0 3 chr2 227349247 227349559 -25907024 + AluY SINE Alu 1 311 0 4084 151 24 6 chr2 227349559 227350083 -25906500 + L1 LINE L1 4480 5022 -1124 224 239 15 60 chr2 227350867 227350902 -25905681 + L3 LINE CR1 1494 1526 -51 1201 160 42 14 chr2 227350902 227351115 -25905468 + MER20 DNA MER1_type 1 219 0 224 239 15 60 chr2 227351115 227351146 -25905437 + L3 LINE CR1 1526 1557 -20 25 51 0 0 chr2 227351813 227351852 -25904731 + AT_rich Low_complexity Low_complexity 1 39 0 2306 106 0 0 chr2 227352087 227352380 -25904203 - AluSc SINE Alu -16 293 1 26 0 0 0 chr2 227352826 227352852 -25903731 + AT_rich Low_complexity Low_complexity 1 26 0 223 139 19 93 chr2 227352880 227352988 -25903595 + (TTAAA)n Simple_repeat Simple_repeat 1 100 0 2716 144 46 5 chr2 227354205 227354616 -25901967 - MSTC LTR MaLR 0 428 1 501 227 28 50 chr2 227354889 227355030 -25901553 - MIR SINE MIR -108 154 17 342 288 141 18 chr2 227355049 227355219 -25901364 - MIR SINE MIR -38 224 34 25 31 0 0 chr2 227355245 227355277 -25901306 + AT_rich Low_complexity Low_complexity 1 32 0 251 345 42 25 chr2 227355362 227355481 -25901102 - MIR SINE MIR -85 177 57 957 171 78 16 chr2 227355492 227355685 -25900898 - MER3 DNA MER1_type -4 205 1 456 163 0 0 chr2 227355704 227355784 -25900799 + MER5A DNA MER1_type 30 109 -80 407 267 25 33 chr2 227355846 227355966 -25900617 - MIR SINE MIR -61 147 29 852 273 54 16 chr2 227356541 227356852 -25899731 + MLT1G LTR MaLR 10 349 -206 2264 87 0 19 chr2 227356857 227357166 -25899417 + AluY SINE Alu 1 303 -8 2271 42 4 8 chr2 227357167 227357430 -25899153 + L1PA8 LINE L1 5905 6166 -6 637 216 53 47 chr2 227357537 227357727 -25898856 + MLT1G LTR MaLR 392 582 -8 298 345 84 0 chr2 227357805 227357924 -25898659 + MIR SINE MIR 16 144 -118 362 291 92 7 chr2 227359513 227359654 -25896929 + MIR SINE MIR 104 256 -6 2517 64 3 16 chr2 227361037 227361348 -25895235 - AluY SINE Alu -4 307 1 233 285 152 36 chr2 227361865 227362030 -25894553 + MIR SINE MIR 20 203 -59 236 30 30 0 chr2 227362478 227362511 -25894072 + (CAA)n Simple_repeat Simple_repeat 2 35 0 250 243 27 14 chr2 227362726 227362800 -25893783 - MLT1J2 LTR MaLR -297 153 79 2592 107 27 33 chr2 227365017 227365383 -25891200 + THE1B LTR MaLR 1 364 0 200 329 13 0 chr2 227365464 227365540 -25891043 - MIR SINE MIR -12 250 174 2036 167 71 0 chr2 227366471 227366794 -25889789 - MER7A DNA MER2_type 0 346 3 383 269 67 8 chr2 227366999 227367118 -25889465 - MIR SINE MIR -116 146 21 362 278 78 63 chr2 227367079 227367334 -25889249 + L2 LINE L2 2700 2958 -356 * 415 215 0 0 chr2 227367577 227367656 -25888927 + L2 LINE L2 3235 3313 0 367 314 86 41 chr2 227368069 227368314 -25888269 + L3b LINE CR1 1241 1496 -87 208 250 157 57 chr2 227368853 227368993 -25887590 + MIR SINE MIR 91 244 -18 574 315 17 6 chr2 227370190 227370368 -25886215 + MER5A DNA MER1_type 6 185 -4 2133 133 0 0 chr2 227370734 227371028 -25885555 - AluSx SINE Alu -18 294 1 240 368 17 17 chr2 227371033 227371150 -25885433 + L2 LINE L2 3156 3272 0 2370 99 0 6 chr2 227372438 227372750 -25883833 - AluSg SINE Alu 0 310 1 3057 162 177 124 chr2 227373239 227373605 -25882978 + L1MD3 LINE L1 6895 7240 -755 404 264 24 32 chr2 227373605 227373730 -25882853 + MLT1F1 LTR MaLR 1 124 -443 3057 162 177 124 chr2 227373730 227374272 -25882311 + L1MD3 LINE L1 7240 7982 -13 201 257 86 29 chr2 227374590 227374695 -25881888 - L2 LINE L2 -62 3251 3141 302 334 6 27 chr2 227374733 227374906 -25881677 - MIR SINE MIR -60 202 37 1946 137 105 23 chr2 227375007 227375172 -25881411 - THE1C LTR MaLR -4 371 221 195 42 0 0 chr2 227375172 227375196 -25881387 + (GA)n Simple_repeat Simple_repeat 1 24 0 1946 137 105 23 chr2 227375196 227375373 -25881210 - THE1C LTR MaLR -154 221 1 1334 106 42 55 chr2 227375373 227375455 -25881128 - THE1C-int LTR MaLR 0 1651 1569 1811 136 0 4 chr2 227375455 227375712 -25880871 - AluSx SINE Alu -7 305 50 1334 106 42 55 chr2 227375712 227375866 -25880717 - THE1C-int LTR MaLR -82 1569 1418 * 3119 155 0 2 chr2 227375853 227376362 -25880221 - THE1C-int LTR MaLR -1143 508 1 2059 119 80 44 chr2 227376362 227376724 -25879859 - THE1C LTR MaLR 0 375 1 331 206 29 0 chr2 227376724 227376792 -25879791 - L1ME1 LINE L1 -51 6115 6046 * 4809 270 55 29 chr2 227376784 227378700 -25877883 + L1ME1 LINE L1 25 1991 -4405 661 194 49 75 chr2 227378704 227378927 -25877656 - MER20 DNA MER1_type 0 219 2 1531 235 54 0 chr2 227378927 227379369 -25877214 + L1ME1 LINE L1 1989 2454 -3942 1666 298 74 19 chr2 227379394 227380448 -25876135 + L1ME1 LINE L1 2629 3740 -2475 2020 205 37 33 chr2 227380457 227380975 -25875608 + L1ME1 LINE L1 4103 4622 -1593 1222 212 57 69 chr2 227380977 227381338 -25875245 + MLT2B1 LTR ERVL 1 463 -57 576 42 0 0 chr2 227381338 227381409 -25875174 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 1222 212 57 69 chr2 227381409 227381426 -25875157 + MLT2B1 LTR ERVL 463 479 -41 552 161 48 6 chr2 227381431 227381599 -25874984 + (TA)n Simple_repeat Simple_repeat 1 175 0 316 106 21 0 chr2 227381614 227381661 -25874922 + MLT2D LTR ERVL 367 414 0 3043 208 50 15 chr2 227381661 227382984 -25873599 + L1ME1 LINE L1 4620 5990 -245 2118 106 3 3 chr2 227382996 227383289 -25873294 + AluSx SINE Alu 12 304 -8 1384 77 0 0 chr2 227383289 227383458 -25873125 + AluSg/x SINE Alu 134 302 -10 785 233 28 43 chr2 227383458 227383711 -25872872 + L1ME1 LINE L1 5979 6227 -8 531 314 53 100 chr2 227384604 227384945 -25871638 - L2 LINE L2 0 3272 2948 476 270 90 54 chr2 227385693 227385915 -25870668 - MIR SINE MIR -13 249 20 462 159 0 0 chr2 227386309 227386397 -25870186 + CT-rich Low_complexity Low_complexity 2 89 0 278 354 24 8 chr2 227386976 227387103 -25869480 + MIR SINE MIR 19 147 -61 1659 199 91 3 chr2 227387135 227387466 -25869117 - MER46B DNA MER2_type 0 236 2 180 0 0 0 chr2 227387820 227387840 -25868743 + (CAGG)n Simple_repeat Simple_repeat 2 21 0 184 333 105 47 chr2 227388650 227388821 -25867762 + MIR3 SINE MIR 1 181 -27 438 325 147 25 chr2 227389179 227389342 -25867241 - MER91A DNA MER1_type 0 196 14 825 276 63 28 chr2 227389426 227389674 -25866909 - LTR16A LTR ERVL -14 436 175 5654 148 44 5 chr2 227389674 227390540 -25866043 - MER54A LTR ERVL -1 900 1 825 276 63 28 chr2 227390540 227390577 -25866006 - LTR16A LTR ERVL -275 175 141 1222 259 41 59 chr2 227390721 227391211 -25865372 + LTR33 LTR ERVL 1 481 -40 430 224 40 24 chr2 227391230 227391355 -25865228 - MIR SINE MIR -49 213 87 274 345 17 17 chr2 227391705 227391824 -25864759 + MIR3 SINE MIR 62 180 -28 600 96 15 126 chr2 227392067 227392202 -25864381 + L1PA12 LINE L1 6046 6165 -3 723 78 19 10 chr2 227392102 227392205 -25864378 + L1PA10 LINE L1 6064 6167 -1 421 279 149 7 chr2 227392555 227392709 -25863874 + MIR3 SINE MIR 30 205 -3 244 324 95 28 chr2 227392758 227392937 -25863646 - LTR16C LTR ERVL -10 481 291 2870 89 15 103 chr2 227393143 227393600 -25862983 + MER4E LTR ERV1 1 569 -197 4580 161 50 75 chr2 227393600 227394699 -25861884 + MER11C LTR ERVK 1 1071 0 2870 89 15 103 chr2 227394699 227394880 -25861703 + MER4E LTR ERV1 569 764 -2 323 258 75 82 chr2 227396177 227396336 -25860247 - MIR SINE MIR -15 247 90 2143 116 0 0 chr2 227396658 227396972 -25859611 + AluSx SINE Alu 1 314 0 356 258 28 90 chr2 227397220 227397398 -25859185 + MIR3 SINE MIR 40 206 -2 186 71 0 0 chr2 227397437 227397465 -25859118 + (A)n Simple_repeat Simple_repeat 1 28 0 2594 99 36 74 chr2 227398299 227398344 -25858239 - MSTA LTR MaLR 0 428 383 2129 92 0 34 chr2 227398344 227398674 -25857909 + AluSc SINE Alu 1 320 0 2594 99 36 74 chr2 227398674 227399072 -25857511 - MSTA LTR MaLR -45 383 1 225 235 0 26 chr2 227399263 227399378 -25857205 + GA-rich Low_complexity Low_complexity 3 114 0 219 320 39 29 chr2 227401792 227401895 -25854688 + MIR SINE MIR 50 153 -109 302 341 29 18 chr2 227402919 227403089 -25853494 - L2 LINE L2 -183 3089 2918 248 220 0 0 chr2 227403813 227403872 -25852711 + CT-rich Low_complexity Low_complexity 2 60 0 201 121 0 0 chr2 227403872 227403905 -25852678 + (CA)n Simple_repeat Simple_repeat 1 33 0 344 262 241 11 chr2 227404505 227404696 -25851887 - MIR SINE MIR 0 262 28 349 182 34 0 chr2 227407173 227407261 -25849322 - L1MB4 LINE L1 -1 6179 6089 408 163 38 0 chr2 227407349 227407429 -25849154 + L1MA5A LINE L1 5016 5098 -1048 5737 133 73 4 chr2 227407593 227408709 -25847874 + L1MA5A LINE L1 5097 6287 -10 5138 212 106 99 chr2 227407809 227409555 -25847028 + L1MC3 LINE L1 5362 7217 -568 * 304 256 22 11 chr2 227409555 227409645 -25846938 + MLT1K LTR MaLR 35 125 -442 5138 212 106 99 chr2 227409645 227410216 -25846367 + L1MC3 LINE L1 7217 7783 -2 637 319 28 12 chr2 227410875 227411126 -25845457 + MIR SINE MIR 7 261 -1 193 264 0 14 chr2 227411133 227411205 -25845378 - L2 LINE L2 -56 3257 3187 21 36 0 0 chr2 227411571 227411599 -25844984 + AT_rich Low_complexity Low_complexity 1 28 0 253 343 61 0 chr2 227412037 227412136 -25844447 + L2 LINE L2 3192 3296 -17 997 236 52 0 chr2 227412249 227412478 -25844105 - MIR SINE MIR -19 243 3 354 339 34 0 chr2 227412493 227412611 -25843972 + MLT1K LTR MaLR 125 246 -342 2506 97 10 56 chr2 227413048 227413441 -25843142 - THE1C LTR MaLR 0 375 1 285 329 32 51 chr2 227413587 227413803 -25842780 - L2 LINE L2 -433 2881 2670 444 319 24 18 chr2 227413895 227414064 -25842519 - MIR3 SINE MIR -3 205 36 2090 179 8 3 chr2 227414847 227415210 -25841373 + MLT1A1 LTR MaLR 1 365 0 1183 234 77 59 chr2 227415570 227416014 -25840569 + L1MD2 LINE L1 5895 6346 -13 814 216 95 53 chr2 227416019 227416356 -25840227 + L1MC5 LINE L1 7517 7873 -88 2260 121 0 0 chr2 227416356 227416661 -25839922 - AluSg SINE Alu -5 305 1 814 216 95 53 chr2 227416661 227416702 -25839881 + L1MC5 LINE L1 7873 7911 -50 264 269 51 0 chr2 227417282 227417360 -25839223 - MIR SINE MIR -70 192 111 332 227 209 9 chr2 227418910 227419020 -25837563 + LTR33 LTR ERVL 28 159 -362 321 279 36 42 chr2 227419116 227419281 -25837302 + LTR33 LTR ERVL 301 464 -57 515 301 62 25 chr2 227419328 227419650 -25836933 + L2 LINE L2 2873 3206 -107 1235 212 60 6 chr2 227420524 227420952 -25835631 - L1ME LINE L1 -682 5744 5300 3976 213 75 47 chr2 227420964 227421628 -25834955 - L1MDb LINE L1 -3313 3093 2449 201 39 0 0 chr2 227421628 227421654 -25834929 + (TTG)n Simple_repeat Simple_repeat 2 27 0 3976 213 75 47 chr2 227421654 227421761 -25834822 - L1MDb LINE L1 -3957 2449 2346 189 94 0 0 chr2 227421761 227421793 -25834790 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 3976 213 75 47 chr2 227421793 227423225 -25833358 - L1MDb LINE L1 -4060 2346 775 22 0 0 0 chr2 227423447 227423469 -25833114 + AT_rich Low_complexity Low_complexity 1 22 0 2746 52 0 0 chr2 227423475 227423801 -25832782 - LTR17 LTR ERV1 -454 326 1 2313 89 0 0 chr2 227423801 227424093 -25832490 - HERV17 LTR ERV1 0 8626 8335 281 77 0 0 chr2 227424083 227424122 -25832461 - HERV17 LTR ERV1 -1078 7548 7510 * 10600 57 2 2 chr2 227424115 227425395 -25831188 - HERV17 LTR ERV1 -2607 6019 4741 1106 123 0 0 chr2 227425395 227425549 -25831034 + AluSg/x SINE Alu 147 300 -10 403 264 96 29 chr2 227425802 227426041 -25830542 - MIR SINE MIR 0 262 8 1053 197 23 0 chr2 227427394 227427612 -25828971 - MIR SINE MIR -10 252 30 180 364 12 29 chr2 227428805 227428978 -25827605 + L2 LINE L2 2903 3072 -200 1384 186 0 0 chr2 227429010 227429246 -25827337 - MER46A DNA MER2_type 0 236 1 674 272 29 17 chr2 227429484 227429723 -25826860 + MIR SINE MIR 21 262 0 305 346 45 13 chr2 227430007 227430163 -25826420 - MER5A DNA MER1_type -28 161 1 1065 266 98 38 chr2 227430892 227431340 -25825243 + LTR33 LTR ERVL 20 494 -27 1271 250 48 15 chr2 227431450 227431782 -25824801 + LTR16C LTR ERVL 149 491 0 430 322 45 20 chr2 227431818 227432020 -25824563 - MIR SINE MIR -8 254 48 823 258 163 12 chr2 227433858 227434195 -25822388 + LTR33A LTR ERVL 136 523 0 342 306 42 7 chr2 227434900 227435044 -25821539 - MIR3 SINE MIR -24 184 36 506 281 63 52 chr2 227435194 227435464 -25821119 - L2 LINE L2 0 3313 3041 382 304 7 27 chr2 227435460 227435608 -25820975 + MIR SINE MIR 118 262 0 * 577 286 62 5 chr2 227435665 227435857 -25820726 + MIR SINE MIR 53 255 -7 445 301 24 0 chr2 227435864 227435987 -25820596 + L2 LINE L2 3188 3313 0 * 658 282 68 18 chr2 227435985 227436014 -25820569 - MIR SINE MIR -17 245 219 1380 311 50 6 chr2 227436014 227436513 -25820070 - LTR33 LTR ERVL 0 521 1 658 282 68 18 chr2 227436513 227436703 -25819880 - MIR SINE MIR -43 219 15 183 313 30 0 chr2 227437840 227437907 -25818676 - MIR3 SINE MIR -39 169 101 264 278 17 61 chr2 227438510 227438625 -25817958 + MIR SINE MIR 21 130 -78 871 247 48 4 chr2 227438812 227439039 -25817544 + MIR SINE MIR 24 260 -2 241 356 94 6 chr2 227439402 227439562 -25817021 + MIR3 SINE MIR 17 190 -18 301 326 21 11 chr2 227439923 227440018 -25816565 + MER5A DNA MER1_type 63 158 -31 238 250 261 34 chr2 227440251 227440427 -25816156 + MIR SINE MIR 26 241 -21 181 263 0 0 chr2 227440393 227440431 -25816152 + L2 LINE L2 3212 3249 -23 * 303 261 42 49 chr2 227440947 227441089 -25815494 + L2 LINE L2 2981 3121 -192 395 320 164 19 chr2 227441106 227441465 -25815118 + LTR16B LTR ERVL 1 411 -53 349 226 36 25 chr2 227441680 227441827 -25814756 - MIR SINE MIR -63 145 3 357 24 0 0 chr2 227441903 227441945 -25814638 + (TG)n Simple_repeat Simple_repeat 1 42 0 198 314 81 0 chr2 227442144 227442230 -25814353 + MIR SINE MIR 34 126 -82 316 234 126 120 chr2 227443588 227443755 -25812828 + MIR3 SINE MIR 36 203 -5 420 271 31 8 chr2 227444651 227444780 -25811803 - L3 LINE CR1 -100 1477 1346 271 248 312 28 chr2 227446118 227446259 -25810324 + MLT1K LTR MaLR 71 251 -337 1224 82 0 0 chr2 227446394 227446574 -25810009 + AluY SINE Alu 130 309 0 354 345 0 0 chr2 227447098 227447208 -25809375 - MIR3 SINE MIR -11 197 88 203 320 39 0 chr2 227447293 227447371 -25809212 + MIR SINE MIR 45 125 -83 259 302 23 12 chr2 227447815 227447901 -25808682 + MLT1K LTR MaLR 156 242 -346 1834 179 17 69 chr2 227449231 227449649 -25806934 - MSTD LTR MaLR 0 396 1 225 0 0 0 chr2 227449970 227449995 -25806588 + (TC)n Simple_repeat Simple_repeat 2 26 0 207 0 0 0 chr2 227449994 227450017 -25806566 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 252 0 0 0 chr2 227450476 227450504 -25806079 + (A)n Simple_repeat Simple_repeat 1 28 0 300 176 14 54 chr2 227450667 227450741 -25805842 - L2 LINE L2 0 3272 3202 195 211 0 0 chr2 227451140 227451178 -25805405 - L2 LINE L2 -2 3311 3274 189 0 0 0 chr2 227451331 227451352 -25805231 + (CCTAG)n Simple_repeat Simple_repeat 5 25 0 182 239 274 51 chr2 227451851 227451968 -25804615 - MIR SINE MIR 0 262 120 402 279 0 0 chr2 227452042 227452121 -25804462 - MIR SINE MIR -143 119 41 701 230 0 19 chr2 227452678 227452839 -25803744 - MER103 DNA DNA -7 159 2 481 269 109 31 chr2 227453709 227453902 -25802681 + MIR SINE MIR 51 258 -4 1897 220 12 10 chr2 227456176 227456548 -25800035 + MLT2D LTR ERVL 1 376 -38 333 0 0 0 chr2 227456548 227456585 -25799998 + (CA)n Simple_repeat Simple_repeat 2 38 0 1897 220 12 10 chr2 227456585 227456625 -25799958 + MLT2D LTR ERVL 376 414 0 1926 134 3 34 chr2 227457231 227457551 -25799032 - AluSx SINE Alu -2 310 1 474 326 11 39 chr2 227457635 227457813 -25798770 + MIR3 SINE MIR 34 206 -2 411 302 82 37 chr2 227458436 227458681 -25797902 + L2 LINE L2 3050 3305 -8 188 227 61 76 chr2 227458755 227458821 -25797762 + L3b LINE CR1 1290 1354 -229 438 294 59 15 chr2 227458851 227458987 -25797596 + MIR3 SINE MIR 19 160 -48 1735 154 7 10 chr2 227459271 227459564 -25797019 + AluJb SINE Alu 1 292 -20 925 279 78 16 chr2 227459637 227459945 -25796638 + MLT1J2 LTR MaLR 5 331 -119 233 322 46 11 chr2 227461093 227461180 -25795403 + MIR SINE MIR 26 115 -147 206 260 0 0 chr2 227461431 227461481 -25795102 + T-rich Low_complexity Low_complexity 1 50 0 317 226 95 51 chr2 227463058 227463195 -25793388 + MER103 DNA DNA 11 153 -13 428 358 0 7 chr2 227464013 227464150 -25792433 - MIR3 SINE MIR -16 192 57 24 32 0 0 chr2 227467942 227467973 -25788610 + AT_rich Low_complexity Low_complexity 1 31 0 227 79 26 0 chr2 227467976 227468014 -25788569 + (TA)n Simple_repeat Simple_repeat 2 40 0 1100 172 95 5 chr2 227468139 227468360 -25788223 + MER2 DNA MER2_type 105 345 0 511 107 36 0 chr2 227468460 227468544 -25788039 - MER53 DNA DNA -95 94 8 450 256 64 13 chr2 227468580 227468736 -25787847 + LTR16A LTR ERVL 287 450 0 258 216 47 30 chr2 227469120 227469187 -25787396 + MIR SINE MIR 79 147 -61 319 235 49 20 chr2 227469625 227469727 -25786856 + MIR SINE MIR 89 193 -69 294 299 158 23 chr2 227469716 227469893 -25786690 + MIR SINE MIR 43 243 -19 * 21 36 0 0 chr2 227470749 227470777 -25785806 + AT_rich Low_complexity Low_complexity 1 28 0 199 283 22 0 chr2 227470829 227470875 -25785708 + L2 LINE L2 3205 3251 -21 3304 195 38 10 chr2 227471548 227472465 -25784118 - L1ME1 LINE L1 -253 5982 5032 2018 279 88 18 chr2 227472460 227473395 -25783188 - L1ME1 LINE L1 -4596 1800 801 * 291 310 63 38 chr2 227473478 227473636 -25782947 + Charlie8 DNA MER1_type 33 194 -2223 1014 207 108 31 chr2 227473664 227474004 -25782579 + MSTD LTR MaLR 3 394 -2 651 303 18 51 chr2 227474078 227474352 -25782231 - LTR16A1 LTR ERVL -4 453 189 201 229 0 0 chr2 227474790 227474838 -25781745 + (TTCA)n Simple_repeat Simple_repeat 4 51 0 333 279 19 25 chr2 227475488 227475646 -25780937 + GA-rich Low_complexity Low_complexity 1 157 0 519 45 0 0 chr2 227475654 227475720 -25780863 + (TG)n Simple_repeat Simple_repeat 1 66 0 208 265 162 26 chr2 227476883 227477000 -25779583 - L3b LINE CR1 -92 1491 1359 1735 157 20 17 chr2 227477751 227478051 -25778532 + MER7A DNA MER2_type 47 345 -1 438 43 43 0 chr2 227478052 227478121 -25778462 + (TG)n Simple_repeat Simple_repeat 2 73 0 183 295 72 93 chr2 227479677 227479816 -25776767 - L2 LINE L2 0 3272 3137 249 253 12 60 chr2 227480387 227480470 -25776113 + L2 LINE L2 3143 3221 -51 1579 239 69 34 chr2 227480555 227481033 -25775550 - MLT1D LTR MaLR -2 503 9 1057 270 111 3 chr2 227481291 227481495 -25775088 + LTR16C LTR ERVL 111 292 -199 530 234 18 0 chr2 227481495 227481606 -25774977 - MER81 DNA DNA -1 113 1 1057 270 111 3 chr2 227481606 227481745 -25774838 + LTR16C LTR ERVL 292 491 0 377 250 83 23 chr2 227481775 227481907 -25774676 + MER91C DNA MER1_type 1 140 0 2496 239 54 38 chr2 227482874 227483559 -25773024 + MER69 DNA AcHobo 10 705 -1821 864 197 101 84 chr2 227483569 227483667 -25772916 + MER69 DNA AcHobo 1650 1745 -781 697 258 0 13 chr2 227483667 227483818 -25772765 + FRAM SINE Alu 3 151 -15 864 197 101 84 chr2 227483818 227484064 -25772519 + MER69 DNA AcHobo 1745 2000 -526 985 125 16 81 chr2 227484064 227484104 -25772479 + L1M3 LINE L1 5288 5329 -851 1941 121 27 0 chr2 227484104 227484401 -25772182 + L1PA15 LINE L1 5861 6165 0 985 125 16 81 chr2 227484401 227484618 -25771965 + L1M3 LINE L1 5329 5482 -698 445 184 18 0 chr2 227484618 227484727 -25771856 + GA-rich Low_complexity Low_complexity 1 111 0 447 135 62 10 chr2 227484755 227484851 -25771732 + L1M3 LINE L1 5475 5575 -596 466 165 0 0 chr2 227484957 227485042 -25771541 + L1MA10 LINE L1 6249 6333 -1 265 307 0 0 chr2 227485733 227485808 -25770775 - MIR SINE MIR -112 150 76 884 298 8 19 chr2 227487201 227487459 -25769124 + MIR SINE MIR 8 262 0 213 244 0 0 chr2 227487661 227487702 -25768881 - MIR SINE MIR -109 153 113 215 246 33 16 chr2 227489053 227489114 -25767469 + MER5A DNA MER1_type 128 189 0 778 138 9 0 chr2 227489253 227489369 -25767214 - MLT1A1 LTR MaLR -2 363 247 243 207 0 35 chr2 227489369 227489427 -25767156 - MLT1A1 LTR MaLR -298 76 21 2610 226 63 12 chr2 227489490 227490096 -25766487 + MER45B DNA AcHobo 6 642 -398 1956 137 7 0 chr2 227490096 227490395 -25766188 + AluSx SINE Alu 1 301 -11 623 264 66 25 chr2 227490447 227490644 -25765939 + MER45B DNA AcHobo 6 210 -830 1476 149 141 9 chr2 227490649 227490997 -25765586 + MER45B DNA AcHobo 647 1040 0 826 221 28 66 chr2 227491136 227491300 -25765283 - MER63A DNA MER1_type -1478 210 54 2186 108 0 10 chr2 227491300 227491605 -25764978 - AluSq SINE Alu -11 302 1 826 221 28 66 chr2 227491605 227491653 -25764930 - MER63A DNA MER1_type -1634 54 6 277 194 208 14 chr2 227491663 227491735 -25764848 - MIR3 SINE MIR -39 169 84 2124 95 9 31 chr2 227492606 227492923 -25763660 - AluSx SINE Alu -2 310 1 2792 131 14 0 chr2 227493041 227493461 -25763122 + MSTA LTR MaLR 3 428 0 1476 152 61 88 chr2 227493698 227494027 -25762556 - MLT1B LTR MaLR -70 320 1 952 250 133 6 chr2 227495219 227495610 -25760973 + LTR33A LTR ERVL 101 521 -2 439 249 154 73 chr2 227495612 227495994 -25760589 - MLT1K LTR MaLR -25 563 151 928 123 7 7 chr2 227497090 227497228 -25759355 - THE1C LTR MaLR 0 375 238 384 357 6 22 chr2 227497411 227497593 -25758990 + G-rich Low_complexity Low_complexity 1 179 0 * 420 340 14 11 chr2 227497466 227497680 -25758903 + GA-rich Low_complexity Low_complexity 1 214 0 1975 153 17 17 chr2 227497855 227498202 -25758381 - THE1C LTR MaLR -28 347 1 1763 163 80 16 chr2 227498202 227498512 -25758071 - MER1B DNA MER1_type -9 330 1 1073 234 82 42 chr2 227498512 227499166 -25757417 + L2 LINE L2 2626 3313 0 300 380 0 0 chr2 227499484 227499605 -25756978 - MIR3 SINE MIR -17 191 71 354 306 46 0 chr2 227499837 227499945 -25756638 + L2 LINE L2 3155 3267 -5 455 326 174 23 chr2 227500548 227500790 -25755793 + MER115 DNA AcHobo 1 205 -488 387 0 0 0 chr2 227500790 227500833 -25755750 + (CA)n Simple_repeat Simple_repeat 1 43 0 455 326 174 23 chr2 227500833 227501068 -25755515 + MER115 DNA AcHobo 205 550 -143 310 238 66 127 chr2 227501128 227501309 -25755274 + MER115 DNA AcHobo 521 690 -3 893 193 91 53 chr2 227501809 227502074 -25754509 - ORSL DNA AcHobo 0 275 1 398 264 124 8 chr2 227502282 227502411 -25754172 + MIR SINE MIR 8 151 -111 210 287 58 81 chr2 227503725 227503899 -25752684 - MIR3 SINE MIR -9 199 30 223 264 123 0 chr2 227504760 227504866 -25751717 + L2 LINE L2 3188 3306 -7 23 33 0 0 chr2 227505198 227505228 -25751355 + AT_rich Low_complexity Low_complexity 1 30 0 2705 173 8 8 chr2 227505237 227505735 -25750848 - L1MB3 LINE L1 -4 6179 5682 626 268 57 5 chr2 227505969 227506178 -25750405 - MIR SINE MIR -19 243 25 193 294 47 47 chr2 227507058 227507143 -25749440 + MIR3 SINE MIR 84 168 -40 341 296 91 0 chr2 227507555 227507687 -25748896 - MIR SINE MIR -70 192 49 2456 185 99 17 chr2 227508357 227508881 -25747702 - MLT1F1 LTR MaLR 0 567 1 934 129 0 0 chr2 227509105 227509229 -25747354 + FLAM_C SINE Alu 1 124 -19 24 0 0 0 chr2 227509230 227509254 -25747329 + AT_rich Low_complexity Low_complexity 1 24 0 522 169 141 7 chr2 227509289 227509431 -25747152 + MIR SINE MIR 98 258 -4 466 310 100 59 chr2 227509468 227510112 -25746471 + L2 LINE L2 2582 3270 -2 193 324 44 0 chr2 227510621 227510689 -25745894 + MIR SINE MIR 47 117 -91 442 264 16 16 chr2 227511750 227511879 -25744704 - L2 LINE L2 0 3313 3185 819 224 12 0 chr2 227513355 227513516 -25743067 + FRAM SINE Alu 11 173 -3 892 157 6 6 chr2 227513526 227513688 -25742895 + GA-rich Low_complexity Low_complexity 1 165 -7 180 0 0 0 chr2 227513688 227513708 -25742875 + (TAG)n Simple_repeat Simple_repeat 2 21 0 2661 43 7 0 chr2 227513745 227514048 -25742535 - AluY SINE Alu -6 305 1 354 212 23 76 chr2 227514830 227514962 -25741621 - MER103 DNA DNA -1 165 41 227 224 9 0 chr2 227515225 227515332 -25741251 + GA-rich Low_complexity Low_complexity 2 109 0 298 146 27 82 chr2 227515350 227515656 -25740927 + (CAGAGA)n Simple_repeat Simple_repeat 1 289 0 277 204 0 0 chr2 227516706 227516760 -25739823 + MIR SINE MIR 30 83 -179 215 208 38 0 chr2 227516822 227516875 -25739708 - MIR SINE MIR -90 172 118 869 160 12 65 chr2 227517689 227517858 -25738725 - MER2 DNA MER2_type -185 160 1 446 267 118 5 chr2 227517858 227518045 -25738538 + L1MC4 LINE L1 6481 6688 -1354 1652 208 35 27 chr2 227518052 227518418 -25738165 + MLT1A2 LTR MaLR 4 372 -2 618 293 72 29 chr2 227518481 227518535 -25738048 + L1MC4 LINE L1 6649 6699 -1343 2098 36 0 4 chr2 227518535 227518783 -25737800 - L1PA3 LINE L1 0 6155 5909 618 293 72 29 chr2 227518783 227518936 -25737647 + L1MC4 LINE L1 6699 6865 -1177 515 256 47 41 chr2 227518932 227519104 -25737479 - L1MEc LINE L1 -3570 2645 2473 * 1410 174 68 70 chr2 227519109 227519287 -25737296 - MLT1B LTR MaLR -4 386 209 2342 118 25 27 chr2 227519287 227519652 -25736931 - THE1B LTR MaLR 0 364 1 1410 174 68 70 chr2 227519652 227519858 -25736725 - MLT1B LTR MaLR -181 209 3 791 243 116 7 chr2 227519867 227520269 -25736314 - L1MEc LINE L1 -3737 2478 2073 1668 296 43 13 chr2 227521536 227522284 -25734299 - L1MEc LINE L1 -4314 2082 1313 2286 131 18 12 chr2 227522345 227522680 -25733903 - MER1B DNA MER1_type 0 337 1 1492 240 58 11 chr2 227522798 227523232 -25733351 - L1MC4 LINE L1 -141 7901 7448 2289 256 19 38 chr2 227523287 227524112 -25732471 + L1 LINE L1 2697 3506 -2640 384 71 0 0 chr2 227524112 227524168 -25732415 + (CA)n Simple_repeat Simple_repeat 1 56 0 2601 111 11 5 chr2 227524220 227524590 -25731993 - L1PB3 LINE L1 0 6154 5783 451 92 0 0 chr2 227524649 227524714 -25731869 + Alu SINE Alu 231 295 -15 291 275 0 12 chr2 227524759 227524839 -25731744 - MER41B LTR ERV1 -299 336 258 2222 102 9 0 chr2 227525012 227525337 -25731246 - L1P5 LINE L1 -529 5625 5298 1908 203 32 13 chr2 227525323 227525787 -25730796 + L1P5 LINE L1 4846 5318 -828 * 226 315 56 36 chr2 227525811 227526113 -25730470 + L1ME LINE L1 3304 3611 -2469 2037 149 7 3 chr2 227526115 227526424 -25730159 + AluJb SINE Alu 3 312 0 2170 256 82 36 chr2 227526702 227529200 -25727383 + L1ME1 LINE L1 157 2786 -3294 * 2267 208 34 109 chr2 227529186 227529376 -25727207 + L1ME1 LINE L1 5346 5549 -551 342 94 19 0 chr2 227529376 227529429 -25727154 + U5 snRNA snRNA 1 54 -62 2267 208 34 109 chr2 227529429 227529729 -25726854 + L1ME1 LINE L1 5549 5811 -289 219 69 0 0 chr2 227529729 227529758 -25726825 + (TGGA)n Simple_repeat Simple_repeat 4 32 0 2267 208 34 109 chr2 227529758 227530020 -25726563 + L1ME1 LINE L1 5811 6091 -9 316 269 90 50 chr2 227530061 227530262 -25726321 + L1ME LINE L1 3727 3935 -2145 2529 158 100 7 chr2 227530325 227530787 -25725796 - MLT1D LTR MaLR 0 505 1 2041 293 101 19 chr2 227530809 227531629 -25724954 + ERVL LTR ERVL 4069 4955 -809 2240 144 14 19 chr2 227532855 227533132 -25723451 - MLT1A1 LTR MaLR 0 365 89 2155 132 135 5 chr2 227533132 227533511 -25723072 + MSTA LTR MaLR 1 428 0 2240 144 14 19 chr2 227533511 227533600 -25722983 - MLT1A1 LTR MaLR -276 89 1 950 235 22 23 chr2 227533762 227534065 -25722518 + MLT1J2 LTR MaLR 2 306 -140 3013 236 32 2 chr2 227534705 227535329 -25721254 + MER45B DNA AcHobo 4 646 -394 5110 142 18 15 chr2 227535329 227536191 -25720392 + L1MA4 LINE L1 5399 6266 -34 8539 111 25 22 chr2 227536191 227537484 -25719099 - HSMAR2 DNA Mariner -4 1298 2 5110 142 18 15 chr2 227537484 227537506 -25719077 + L1MA4 LINE L1 6266 6286 -14 1443 159 159 11 chr2 227537506 227537518 -25719065 + MER45B DNA AcHobo 637 646 -935 261 0 0 0 chr2 227537518 227537547 -25719036 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 1443 159 159 11 chr2 227537547 227537885 -25718698 + MER45B DNA AcHobo 646 1039 -1 4921 196 91 66 chr2 227537980 227539219 -25717364 + L1MDa LINE L1 2 1507 -5033 2178 122 0 0 chr2 227539219 227539515 -25717068 + AluSx SINE Alu 1 296 -16 4921 196 91 66 chr2 227539515 227540058 -25716525 + L1MDa LINE L1 1507 2035 -4505 3063 156 46 43 chr2 227540170 227540861 -25715722 + L1MB2 LINE L1 5477 6169 -2 1673 184 103 34 chr2 227540878 227541373 -25715210 + MER69 DNA AcHobo 1989 2517 -9 2012 150 7 0 chr2 227541695 227542001 -25714582 - AluSx SINE Alu -4 308 1 1077 284 37 58 chr2 227542461 227543029 -25713554 - L2 LINE L2 -808 2506 1951 985 226 26 0 chr2 227543580 227543770 -25712813 - MER63A DNA MER1_type -15 195 1 629 191 53 20 chr2 227543827 227543979 -25712604 - MER103 DNA DNA -8 158 2 655 193 37 52 chr2 227545629 227545813 -25710770 - MIR SINE MIR -44 218 36 417 161 0 0 chr2 227546607 227546694 -25709889 + (TGGA)n Simple_repeat Simple_repeat 4 90 0 295 304 45 22 chr2 227547918 227548057 -25708526 + MIR SINE MIR 23 162 -59 322 259 144 15 chr2 227548211 227548412 -25708171 + L1 LINE L1 4607 4833 -1313 398 145 72 130 chr2 227548417 227548487 -25708096 + MLT1D LTR MaLR 1 61 -565 1887 178 5 70 chr2 227548487 227548904 -25707679 - MLT1B LTR MaLR 0 390 1 398 145 72 130 chr2 227548904 227548970 -25707613 + MLT1D LTR MaLR 61 129 -497 2252 180 34 10 chr2 227548970 227549070 -25707513 + MSTC LTR MaLR 1 97 -331 1834 88 72 4 chr2 227549070 227549372 -25707211 + AluY SINE Alu 3 322 0 2252 180 34 10 chr2 227549372 227549681 -25706902 + MSTC LTR MaLR 97 421 -7 1127 194 147 32 chr2 227549682 227550022 -25706561 + MLT1D LTR MaLR 127 505 0 470 297 150 56 chr2 227550048 227550388 -25706195 + L1 LINE L1 4861 5232 -914 1028 232 116 46 chr2 227550757 227551170 -25705413 + MLT1J1 LTR MaLR 1 442 -4 1072 224 190 17 chr2 227551235 227551588 -25704995 + LTR50 LTR ERVL 1 414 -381 381 155 242 93 chr2 227551588 227551667 -25704916 + LTR50 LTR ERVL 563 629 -166 2060 110 3 7 chr2 227551667 227551968 -25704615 - AluSx SINE Alu -12 300 1 381 155 242 93 chr2 227551968 227552049 -25704534 + LTR50 LTR ERVL 629 747 -48 249 295 35 128 chr2 227552736 227552963 -25703620 + L2 LINE L2 3016 3221 -51 458 324 66 43 chr2 227553131 227553387 -25703196 - L3 LINE CR1 -32 1545 1284 210 218 109 0 chr2 227554515 227554570 -25702013 - L3b LINE CR1 -180 1403 1343 332 307 27 71 chr2 227555236 227555461 -25701122 - MIR SINE MIR -17 245 31 369 313 93 13 chr2 227555948 227556098 -25700485 - MIR3 SINE MIR -4 204 43 207 0 0 0 chr2 227556701 227556724 -25699859 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 803 277 130 38 chr2 227557727 227558150 -25698433 + LTR33 LTR ERVL 5 466 -55 808 207 0 0 chr2 227558317 227558462 -25698121 + MER5A DNA MER1_type 1 145 -44 1552 146 11 36 chr2 227558476 227558757 -25697826 + AluJb SINE Alu 23 296 -16 265 197 16 16 chr2 227558781 227558842 -25697741 + MER5A DNA MER1_type 128 188 -1 1206 223 162 66 chr2 227559548 227559974 -25696609 - MLT1H LTR MaLR -81 468 2 371 269 53 45 chr2 227561944 227562117 -25694466 - MIR3 SINE MIR -62 146 15 367 310 40 46 chr2 227562206 227562380 -25694203 + MIR3 SINE MIR 35 207 -1 445 258 207 8 chr2 227562967 227563166 -25693417 - MIR SINE MIR -6 256 20 504 59 0 0 chr2 227563302 227563370 -25693213 + (TCTA)n Simple_repeat Simple_repeat 2 69 0 445 299 4 4 chr2 227563495 227563620 -25692963 - MIR SINE MIR -73 135 10 500 254 90 50 chr2 227564402 227564603 -25691980 + MIR SINE MIR 12 220 -42 330 300 0 0 chr2 227566111 227566201 -25690382 + MIR SINE MIR 117 206 -56 515 299 116 15 chr2 227566865 227567185 -25689398 + L1ME LINE L1 5474 5822 -299 749 171 0 13 chr2 227568621 227568773 -25687810 + C-rich Low_complexity Low_complexity 3 152 0 358 216 8 104 chr2 227569195 227569329 -25687254 + LTR67 LTR ERVL 437 557 0 207 239 0 0 chr2 227569829 227569875 -25686708 + MIR SINE MIR 104 149 -113 247 235 0 0 chr2 227570185 227570236 -25686347 + L2 LINE L2 3185 3235 -37 215 274 48 12 chr2 227570339 227570423 -25686160 + MIR SINE MIR 20 106 -156 348 284 93 43 chr2 227570424 227570586 -25685997 - MLT1K LTR MaLR 0 588 419 340 297 139 48 chr2 227571789 227571998 -25684585 - MIR SINE MIR -14 248 21 402 21 0 0 chr2 227572869 227572916 -25683667 + (TAG)n Simple_repeat Simple_repeat 3 49 0 391 224 47 12 chr2 227573033 227573118 -25683465 - MIR SINE MIR -147 115 28 343 301 18 26 chr2 227573564 227573677 -25682906 - L3 LINE CR1 -78 1499 1388 1705 178 66 33 chr2 227573765 227574158 -25682425 + L1ME1 LINE L1 5538 5943 -223 270 193 0 0 chr2 227574158 227574215 -25682368 + (TG)n Simple_repeat Simple_repeat 2 58 0 713 254 20 5 chr2 227574253 227574454 -25682129 + L1ME1 LINE L1 5957 6160 -6 2082 130 53 14 chr2 227574512 227574873 -25681710 - THE1C LTR MaLR 0 375 1 206 398 86 8 chr2 227575722 227575850 -25680733 - L3 LINE CR1 -222 1355 1218 23 33 0 0 chr2 227576164 227576194 -25680389 + AT_rich Low_complexity Low_complexity 1 30 0 236 367 73 7 chr2 227577052 227577202 -25679381 + L2 LINE L2 3112 3271 -1 22 35 0 0 chr2 227577725 227577754 -25678829 + AT_rich Low_complexity Low_complexity 1 29 0 2024 75 14 0 chr2 227579225 227579547 -25677036 + AluY SINE Alu 1 326 0 223 333 178 8 chr2 227581611 227581740 -25674843 + L2 LINE L2 3122 3272 0 349 257 81 74 chr2 227581920 227582068 -25674515 + MIR SINE MIR 112 260 -2 239 374 65 0 chr2 227582254 227582361 -25674222 + L2 LINE L2 3159 3272 0 599 269 192 37 chr2 227583647 227583850 -25672733 + L2 LINE L2 2867 3037 -276 2621 150 19 5 chr2 227583850 227584270 -25672313 - MSTB LTR MaLR 0 426 1 599 269 192 37 chr2 227584270 227584441 -25672142 + L2 LINE L2 3037 3299 -14 769 293 97 55 chr2 227584496 227585269 -25671314 - L2 LINE L2 -96 3176 2383 356 61 0 20 chr2 227585578 227585627 -25670956 - MLT2D LTR ERVL -1 519 472 380 203 54 0 chr2 227585629 227585702 -25670881 + Tigger5 DNA MER2_type 2 78 -2245 472 177 0 0 chr2 227585702 227585781 -25670802 - Tigger5 DNA MER2_type -3 2320 2242 * 585 134 0 0 chr2 227585771 227585853 -25670730 + Tigger5 DNA MER2_type 2242 2323 0 * 1273 217 18 17 chr2 227585853 227586158 -25670425 - MLT2D LTR ERVL -43 371 68 292 330 0 11 chr2 227586196 227586287 -25670296 - MIR SINE MIR -103 105 16 549 0 0 0 chr2 227586310 227586371 -25670212 + (TG)n Simple_repeat Simple_repeat 1 61 0 206 292 34 45 chr2 227587981 227588070 -25668513 - MIR3 SINE MIR -23 185 98 271 275 109 51 chr2 227588659 227588797 -25667786 + MER5A DNA MER1_type 44 189 0 468 51 0 0 chr2 227589119 227589178 -25667405 + (TG)n Simple_repeat Simple_repeat 1 59 0 464 86 14 0 chr2 227590168 227590238 -25666345 + (CA)n Simple_repeat Simple_repeat 1 71 0 616 177 29 17 chr2 227590395 227590570 -25666013 + CT-rich Low_complexity Low_complexity 1 177 0 383 282 65 40 chr2 227590627 227590751 -25665832 - L2 LINE L2 -5 3267 3141 204 67 0 0 chr2 227591637 227591667 -25664916 + (CA)n Simple_repeat Simple_repeat 1 30 0 213 279 15 0 chr2 227592212 227592280 -25664303 + L3b LINE CR1 1319 1387 -196 305 193 129 117 chr2 227592908 227593079 -25663504 - MIR3 SINE MIR -3 205 33 2639 10 0 10 chr2 227593562 227593865 -25662718 - AluYa5 SINE Alu -11 300 1 320 315 68 27 chr2 227594217 227594363 -25662220 + MER5B DNA MER1_type 2 153 -25 327 212 34 102 chr2 227594753 227594871 -25661712 + L2 LINE L2 3155 3264 -8 2523 218 63 46 chr2 227595110 227596263 -25660320 + L1ME3 LINE L1 4829 6012 -152 2333 232 70 8 chr2 227596275 227596787 -25659796 - MLT1H1 LTR MaLR 0 555 12 334 204 176 9 chr2 227596800 227596908 -25659675 + L1ME3 LINE L1 6020 6145 -17 4280 35 2 6 chr2 227596924 227597414 -25659169 - L1PA3 LINE L1 -3 6152 5665 25223 30 2 5 chr2 227597414 227600705 -25655878 + L1PA3 LINE L1 2400 5676 -479 183 253 247 32 chr2 227600720 227600878 -25655705 - MIR SINE MIR -51 211 20 286 359 38 8 chr2 227600934 227601065 -25655518 - L2 LINE L2 -1 3271 3137 406 318 97 0 chr2 227601321 227601497 -25655086 - MIR SINE MIR -33 229 37 650 250 7 14 chr2 227601635 227601775 -25654808 - MER63A DNA MER1_type -17 193 55 324 258 10 21 chr2 227602748 227602845 -25653738 - MIR SINE MIR -11 251 156 326 284 72 102 chr2 227603308 227603572 -25653011 - L2 LINE L2 -29 3243 2988 398 263 8 51 chr2 227603810 227603928 -25652655 + MIR SINE MIR 32 144 -64 916 246 84 0 chr2 227604543 227604746 -25651837 + MER58A DNA MER1_type 5 224 0 220 208 65 39 chr2 227604820 227604897 -25651686 - L2 LINE L2 0 3313 3235 186 336 202 0 chr2 227604963 227605082 -25651501 + L2 LINE L2 2948 3090 -182 1843 181 99 11 chr2 227605276 227605640 -25650943 + MSTD LTR MaLR 1 396 0 1003 293 139 41 chr2 227605790 227606206 -25650377 + MER115 DNA AcHobo 1 457 -236 243 0 0 0 chr2 227606275 227606302 -25650281 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 579 252 29 0 chr2 227606303 227606442 -25650141 - L1MD3 LINE L1 -43 7952 7810 291 310 69 40 chr2 227606932 227607106 -25649477 + MIR3 SINE MIR 15 193 -15 205 330 0 53 chr2 227607140 227607328 -25649255 + CT-rich Low_complexity Low_complexity 3 180 0 296 188 0 0 chr2 227608398 227608446 -25648137 - L3 LINE CR1 -7 1570 1523 212 337 12 12 chr2 227608607 227608693 -25647890 - MIR3 SINE MIR -51 157 72 253 271 178 9 chr2 227608705 227608812 -25647771 - MIR SINE MIR -68 140 16 369 361 99 41 chr2 227609205 227609548 -25647035 + L2 LINE L2 2822 3184 -88 386 243 20 115 chr2 227609586 227609734 -25646849 + MER20 DNA MER1_type 70 203 -16 218 280 0 0 chr2 227609951 227610001 -25646582 + MIR3 SINE MIR 151 200 -8 2122 92 0 52 chr2 227610584 227610909 -25645674 - AluY SINE Alu -3 308 1 509 270 26 63 chr2 227611002 227611191 -25645392 + MER5A DNA MER1_type 8 189 0 545 258 13 26 chr2 227611011 227611162 -25645421 - MER5B DNA MER1_type -1 177 29 939 208 139 17 chr2 227612118 227612443 -25644140 - MLT2D LTR ERVL 0 397 1 400 261 14 56 chr2 227612462 227612604 -25643979 - MIR SINE MIR -116 146 11 2118 117 7 13 chr2 227612768 227613075 -25643508 - AluSp SINE Alu -8 305 1 808 325 182 6 chr2 227613530 227613997 -25642586 - L3 LINE CR1 -113 1464 916 23 0 0 0 chr2 227615059 227615082 -25641501 + AT_rich Low_complexity Low_complexity 1 23 0 2522 133 20 33 chr2 227615082 227615535 -25641048 - L1MA7 LINE L1 -1 6290 5844 207 182 15 30 chr2 227615741 227615807 -25640776 + (TAA)n Simple_repeat Simple_repeat 2 66 0 748 270 87 4 chr2 227615809 227616039 -25640544 - MIR SINE MIR 0 262 14 323 259 173 27 chr2 227616111 227616296 -25640287 - MIR SINE MIR -14 248 37 3723 209 51 22 chr2 227666309 227666793 -25589790 + L1MDa LINE L1 2040 2509 -4031 2245 116 0 7 chr2 227666793 227667094 -25589489 + AluSc SINE Alu 1 299 -10 3723 209 51 22 chr2 227667094 227668338 -25588245 + L1MDa LINE L1 2509 3825 -2715 1957 164 17 0 chr2 227668339 227668692 -25587891 + L1MD1 LINE L1 5884 6242 0 2194 137 3 0 chr2 227668698 227669005 -25587578 + AluSx SINE Alu 1 308 -4 927 117 0 16 chr2 227669193 227669321 -25587262 + FRAM SINE Alu 39 164 -12 1366 229 11 39 chr2 227669818 227670255 -25586328 - L1MCa LINE L1 -5025 1401 977 1126 217 64 6 chr2 227670248 227670562 -25586021 + L1ME1 LINE L1 5830 6161 -5 * 779 283 19 22 chr2 227670576 227670898 -25585685 + L1ME LINE L1 5417 5737 -433 660 229 104 15 chr2 227671346 227671547 -25585036 - MER20 DNA MER1_type 0 219 1 266 239 123 23 chr2 227671961 227672091 -25584492 + L2 LINE L2 3113 3255 -17 5309 130 132 100 chr2 227672973 227674486 -25582097 - pTR5 LTR ERV1 0 2438 743 329 293 104 24 chr2 227674532 227674696 -25581887 + MIR SINE MIR 5 181 -81 463 334 35 17 chr2 227674765 227674994 -25581589 - MIR SINE MIR -28 234 3 185 186 23 0 chr2 227675341 227675384 -25581199 + L3b LINE CR1 1278 1321 -262 236 288 0 50 chr2 227677988 227678068 -25578515 - MLT1K LTR MaLR -327 261 186 1089 260 92 26 chr2 227678234 227678580 -25578003 + MLT1J LTR MaLR 6 374 -137 237 360 62 42 chr2 227678696 227678708 -25577875 + MIR SINE MIR 42 52 -210 1872 157 0 39 chr2 227678708 227679020 -25577563 + AluJo SINE Alu 1 300 -12 237 360 62 42 chr2 227679020 227679209 -25577374 + MIR SINE MIR 52 253 -9 325 281 124 16 chr2 227679454 227679575 -25577008 - L2 LINE L2 -2 3270 3137 1006 205 43 31 chr2 227679604 227679858 -25576725 - MIR SINE MIR -4 258 2 635 301 52 87 chr2 227679934 227680303 -25576280 + L2 LINE L2 2917 3272 0 184 182 0 0 chr2 227680968 227681001 -25575582 - MIR SINE MIR -62 146 114 211 273 231 33 chr2 227681094 227681336 -25575247 - L3 LINE CR1 -108 1469 1180 499 234 0 9 chr2 227681642 227681875 -25574708 + (TG)n Simple_repeat Simple_repeat 1 230 0 431 246 7 0 chr2 227681930 227682218 -25574365 + (TG)n Simple_repeat Simple_repeat 1 290 0 495 250 24 0 chr2 227682799 227682923 -25573660 + MER5B DNA MER1_type 2 128 -50 336 289 21 0 chr2 227683335 227683432 -25573151 - MER5A DNA MER1_type -80 109 11 2347 111 0 9 chr2 227683450 227683790 -25572793 + AluSx SINE Alu 1 337 0 632 259 60 32 chr2 227684253 227684469 -25572114 + MIR SINE MIR 20 241 -21 241 294 47 0 chr2 227684527 227684612 -25571971 + MIR SINE MIR 97 185 -77 2183 174 47 37 chr2 227684708 227684968 -25571615 + Charlie1b DNA MER1_type 1 257 -2504 1877 133 7 33 chr2 227684968 227685268 -25571315 + AluJo SINE Alu 11 302 -10 2183 174 47 37 chr2 227685268 227685519 -25571064 + Charlie1b DNA MER1_type 257 517 -6 955 282 195 30 chr2 227685823 227686295 -25570288 + MLT1K LTR MaLR 37 586 -2 226 227 0 0 chr2 227687207 227687251 -25569332 + (CA)n Simple_repeat Simple_repeat 2 45 0 25 0 0 0 chr2 227689514 227689539 -25567044 + AT_rich Low_complexity Low_complexity 1 25 0 312 27 0 0 chr2 227690927 227690964 -25565619 + (TC)n Simple_repeat Simple_repeat 2 38 0 659 65 81 10 chr2 227692098 227692585 -25563998 + (CA)n Simple_repeat Simple_repeat 1 521 0 239 319 11 11 chr2 227692952 227693043 -25563540 + MER96 DNA MER1_type? 77 167 -8 231 188 0 0 chr2 227695176 227695224 -25561359 + (CA)n Simple_repeat Simple_repeat 1 48 0 231 114 0 0 chr2 227695748 227695783 -25560800 + (TGGA)n Simple_repeat Simple_repeat 2 36 0 1455 66 2 0 chr2 227695818 227696333 -25560250 + (TGGA)n Simple_repeat Simple_repeat 1 516 0 226 267 158 30 chr2 227697244 227697345 -25559238 + MIR SINE MIR 131 244 -18 330 103 117 44 chr2 227697463 227697554 -25559029 + L1MA7 LINE L1 6162 6265 -47 1642 210 0 7 chr2 227697554 227697854 -25558729 - AluJo SINE Alu -14 298 1 330 103 117 44 chr2 227697854 227697871 -25558712 + L1MA7 LINE L1 6265 6279 -33 309 229 14 14 chr2 227697857 227697927 -25558656 - MER5A DNA MER1_type -117 72 3 * 319 327 73 44 chr2 227699403 227699637 -25556946 + MIR SINE MIR 22 259 -3 1668 168 0 44 chr2 227700675 227700990 -25555593 - AluJb SINE Alu -11 301 1 899 249 14 0 chr2 227700990 227701203 -25555380 - MER58A DNA MER1_type -8 216 1 2476 179 28 24 chr2 227701697 227702160 -25554423 + MLT1C LTR MaLR 1 465 -2 232 337 32 11 chr2 227702340 227702435 -25554148 - L3b LINE CR1 -327 1256 1160 389 269 62 0 chr2 227702696 227702814 -25553769 - MIR3 SINE MIR -11 197 74 604 320 93 18 chr2 227703860 227704085 -25552498 + MIR SINE MIR 20 261 -1 260 333 52 0 chr2 227704201 227704297 -25552286 - MIR3 SINE MIR -54 154 54 391 320 47 8 chr2 227705597 227705725 -25550858 - MIR SINE MIR -127 135 3 753 318 18 29 chr2 227705918 227706198 -25550385 + L3 LINE CR1 1284 1560 -17 302 300 79 29 chr2 227706885 227707025 -25549558 + L3b LINE CR1 1326 1472 -111 195 369 12 25 chr2 227707638 227707798 -25548785 + L2 LINE L2 2933 3090 -182 697 282 136 0 chr2 227707880 227708100 -25548483 + MIR SINE MIR 13 262 0 191 167 17 100 chr2 227709391 227709451 -25547132 - MIR SINE MIR -65 143 89 655 238 17 0 chr2 227709841 227710013 -25546570 - MER58A DNA MER1_type -3 221 47 789 249 19 0 chr2 227710688 227710901 -25545682 - MER58A DNA MER1_type -7 217 1 315 228 65 11 chr2 227710919 227711011 -25545572 - MIR SINE MIR -89 119 23 368 270 95 0 chr2 227711137 227711263 -25545320 - MIR SINE MIR -121 141 4 223 250 47 0 chr2 227711567 227711631 -25544952 + L2 LINE L2 3183 3249 -23 357 252 29 65 chr2 227711819 227711958 -25544625 + LTR33 LTR ERVL 48 181 -340 241 205 170 45 chr2 227712031 227712143 -25544440 + LTR33 LTR ERVL 324 449 -72 252 208 57 0 chr2 227713124 227713177 -25543406 + MIR SINE MIR 109 164 -98 231 103 0 0 chr2 227713886 227713925 -25542658 + (TGAA)n Simple_repeat Simple_repeat 4 42 0 190 314 0 0 chr2 227713928 227713979 -25542604 + L2 LINE L2 3210 3260 -12 276 316 42 60 chr2 227714289 227714457 -25542126 + MIR3 SINE MIR 37 201 -7 931 180 46 60 chr2 227715600 227715768 -25540815 + MER20 DNA MER1_type 5 171 -48 2190 86 3 33 chr2 227715768 227716069 -25540514 + AluSq SINE Alu 1 292 -21 931 180 46 60 chr2 227716069 227716117 -25540466 + MER20 DNA MER1_type 171 218 -1 217 303 20 20 chr2 227716559 227716658 -25539925 + GA-rich Low_complexity Low_complexity 1 99 0 263 302 0 0 chr2 227717748 227717811 -25538772 + (TG)n Simple_repeat Simple_repeat 2 64 0 318 26 0 0 chr2 227718617 227718656 -25537927 + (CA)n Simple_repeat Simple_repeat 2 40 0 282 73 0 0 chr2 227719600 227719641 -25536942 + (CA)n Simple_repeat Simple_repeat 2 42 0 865 232 72 0 chr2 227720351 227720588 -25535995 + MER33 DNA MER1_type 6 259 -65 545 186 98 16 chr2 227720586 227720769 -25535814 + Charlie5 DNA MER1_type 2427 2624 0 * 184 296 78 43 chr2 227720990 227721105 -25535478 + L2 LINE L2 314 432 -2882 555 314 16 11 chr2 227722077 227722265 -25534318 + MER5A DNA MER1_type 1 189 0 186 43 0 0 chr2 227725738 227725761 -25530822 + (CA)n Simple_repeat Simple_repeat 2 24 0 231 125 0 0 chr2 227726226 227726266 -25530317 + (CA)n Simple_repeat Simple_repeat 2 41 0 408 306 22 0 chr2 227727107 227727241 -25529342 - MIR SINE MIR -90 172 36 335 294 18 25 chr2 227727609 227727772 -25528811 + GA-rich Low_complexity Low_complexity 2 163 0 2258 251 246 14 chr2 227728697 227729764 -25526819 + L2 LINE L2 2013 3311 -2 1075 363 88 23 chr2 227729780 227731139 -25525444 + L2 LINE L2 1386 2833 -481 670 305 15 6 chr2 227731493 227731745 -25524838 - L1 LINE L1 -1914 4232 3985 338 132 0 0 chr2 227732893 227732946 -25523637 + MER63 DNA MER1_type 695 747 -313 377 297 11 99 chr2 227733790 227733972 -25522611 + L2 LINE L2 3016 3181 -91 261 0 0 0 chr2 227734838 227734867 -25521716 + (CTG)n Simple_repeat Simple_repeat 3 31 0 481 250 36 127 chr2 227735999 227736251 -25520332 + MIR SINE MIR 22 250 -12 426 69 0 0 chr2 227737253 227737311 -25519272 + (CA)n Simple_repeat Simple_repeat 2 59 0 215 376 91 21 chr2 227737540 227737782 -25518801 - MIR SINE MIR 0 262 4 216 67 0 0 chr2 227737793 227737823 -25518760 + (CA)n Simple_repeat Simple_repeat 1 30 0 306 0 0 0 chr2 227738115 227738149 -25518434 + (CA)n Simple_repeat Simple_repeat 2 35 0 2226 104 0 3 chr2 227738536 227738835 -25517748 + AluSx SINE Alu 1 298 -14 466 310 14 7 chr2 227740661 227740803 -25515780 - MER5A DNA MER1_type 0 189 47 385 252 55 24 chr2 227740691 227740818 -25515765 + MER5A DNA MER1_type 40 170 -19 * 255 61 0 0 chr2 227742231 227742264 -25514319 + (TC)n Simple_repeat Simple_repeat 2 34 0 291 330 80 0 chr2 227742275 227742363 -25514220 + MER91C DNA MER1_type 45 139 -1 254 249 149 43 chr2 227743922 227744085 -25512498 - MIR3 SINE MIR -21 187 8 181 29 59 29 chr2 227745171 227745205 -25511378 + (GGGA)n Simple_repeat Simple_repeat 2 36 0 270 0 0 0 chr2 227745346 227745376 -25511207 + (CA)n Simple_repeat Simple_repeat 2 31 0 464 133 0 64 chr2 227745601 227745774 -25510809 + (CAGCC)n Simple_repeat Simple_repeat 5 166 0 211 347 75 34 chr2 227747574 227747721 -25508862 + MER5A DNA MER1_type 4 156 -33 * 292 325 65 13 chr2 227747601 227747755 -25508828 - MER5B DNA MER1_type -16 162 1 617 336 114 28 chr2 227747762 227748235 -25508348 - L3 LINE CR1 -112 1465 952 627 285 70 9 chr2 227748249 227748463 -25508120 + MIR SINE MIR 16 242 -20 258 323 87 36 chr2 227749255 227749450 -25507133 - MIR3 SINE MIR -3 205 1 839 181 24 109 chr2 227749988 227750198 -25506385 + MER20 DNA MER1_type 28 219 0 476 319 19 19 chr2 227750245 227750402 -25506181 + MIR3 SINE MIR 29 185 -23 294 324 83 0 chr2 227751035 227751143 -25505440 - MIR SINE MIR -70 192 76 396 262 99 37 chr2 227751260 227751451 -25505132 + MARNA DNA Mariner 19 221 -365 245 278 0 28 chr2 227752923 227752995 -25503588 + MIR3 SINE MIR 117 186 -22 534 235 94 12 chr2 227753665 227753835 -25502748 + MIR SINE MIR 49 232 -30 936 270 23 58 chr2 227753903 227754248 -25502335 + L1MC4a LINE L1 5539 5871 -1937 1466 226 77 37 chr2 227754267 227754796 -25501787 + L2 LINE L2 2772 3308 -5 217 158 53 18 chr2 227755097 227755154 -25501429 + MIR SINE MIR 9 67 -195 762 309 42 4 chr2 227755231 227755467 -25501116 - MIR SINE MIR -3 259 15 238 192 19 0 chr2 227756974 227757026 -25499557 + L2 LINE L2 3200 3252 -20 189 171 0 0 chr2 227757038 227757073 -25499510 + GA-rich Low_complexity Low_complexity 4 38 0 211 292 0 14 chr2 227757842 227757914 -25498669 - L3b LINE CR1 -188 1395 1325 331 246 33 74 chr2 227758679 227758801 -25497782 + MIR SINE MIR 40 156 -106 4142 176 50 14 chr2 227758924 227759880 -25496703 + L1MB8 LINE L1 5184 6174 -4 279 0 0 0 chr2 227760698 227760729 -25495854 + (CA)n Simple_repeat Simple_repeat 2 32 0 472 241 158 0 chr2 227761109 227761242 -25495341 - MIR3 SINE MIR -21 187 34 480 339 41 16 chr2 227761377 227761622 -25494961 - MIR SINE MIR 0 262 12 888 278 115 25 chr2 227761625 227761989 -25494594 + MLT1I LTR MaLR 11 407 -2 235 271 10 21 chr2 227762243 227762339 -25494244 + CT-rich Low_complexity Low_complexity 1 95 0 2081 192 16 8 chr2 227763252 227763637 -25492946 + MLT1B LTR MaLR 1 388 -2 214 341 54 39 chr2 227764023 227764152 -25492431 + MIR SINE MIR 35 165 -43 530 310 88 0 chr2 227765074 227765245 -25491338 + MIR SINE MIR 51 236 -26 289 190 35 0 chr2 227765452 227765510 -25491073 - MIR SINE MIR -201 61 2 269 300 11 11 chr2 227766660 227766750 -25489833 + MIR3 SINE MIR 116 205 -3 1099 104 7 0 chr2 227768266 227768420 -25488163 + L1PA8 LINE L1 6017 6171 -1 349 333 126 0 chr2 227768497 227768671 -25487912 - L3b LINE CR1 -200 1383 1188 21 71 0 0 chr2 227769189 227769231 -25487352 + AT_rich Low_complexity Low_complexity 1 42 0 296 53 0 0 chr2 227769408 227769475 -25487108 - Alu SINE Alu 0 309 243 1776 171 0 0 chr2 227769477 227769770 -25486813 - AluJo SINE Alu -19 293 1 2009 143 0 0 chr2 227769939 227770239 -25486344 - AluJo SINE Alu -12 300 1 364 250 28 42 chr2 227770245 227770424 -25486159 - HAL1b LINE L1 -193 2314 747 367 263 60 53 chr2 227770685 227770800 -25485783 + L2 LINE L2 3139 3257 -15 198 0 0 0 chr2 227770800 227770822 -25485761 + (TGGG)n Simple_repeat Simple_repeat 1 22 0 367 263 60 53 chr2 227770822 227770839 -25485744 + L2 LINE L2 3257 3272 0 900 173 0 0 chr2 227770839 227771018 -25485565 + (TGGA)n Simple_repeat Simple_repeat 2 180 0 438 331 33 33 chr2 227771207 227771391 -25485192 + L2 LINE L2 3087 3270 -2 328 279 39 10 chr2 227772848 227772952 -25483631 + GA-rich Low_complexity Low_complexity 2 108 0 2477 62 3 0 chr2 227773976 227774282 -25482301 - AluSp SINE Alu -6 307 1 186 240 58 58 chr2 227774329 227774433 -25482150 - MIR3 SINE MIR -50 158 55 2315 127 33 28 chr2 227775173 227775535 -25481048 + THE1B LTR MaLR 1 364 0 482 340 127 18 chr2 227776141 227776473 -25480110 + L2 LINE L2 2917 3284 -29 239 209 154 0 chr2 227776731 227776822 -25479761 + MIR3 SINE MIR 60 164 -44 639 272 107 21 chr2 227776831 227777121 -25479462 + L2 LINE L2 2999 3313 0 639 336 19 0 chr2 227777935 227778146 -25478437 + MIR SINE MIR 23 237 -25 608 259 192 26 chr2 227778271 227778772 -25477811 + L2 LINE L2 2668 3294 -19 2184 89 7 13 chr2 227778772 227779076 -25477507 - AluSx SINE Alu -10 302 1 608 259 192 26 chr2 227779076 227779098 -25477485 + L2 LINE L2 3294 3311 -2 270 0 0 0 chr2 227780075 227780105 -25476478 + (CA)n Simple_repeat Simple_repeat 1 30 0 312 250 36 111 chr2 227780395 227780587 -25475996 + MIR3 SINE MIR 9 180 -28 270 281 33 0 chr2 227780859 227780971 -25475612 - MIR3 SINE MIR -27 181 66 2003 122 0 0 chr2 227781051 227781359 -25475224 + AluSx SINE Alu 3 310 0 672 297 65 9 chr2 227782676 227782908 -25473675 - MIR SINE MIR -1 261 17 1517 213 102 37 chr2 227782945 227783343 -25473240 + MLT1C LTR MaLR 8 438 -29 1089 173 76 149 chr2 227783343 227783712 -25472871 + MER2 DNA MER2_type 2 343 -1 1517 213 102 37 chr2 227783712 227783745 -25472838 + MLT1C LTR MaLR 438 467 0 462 252 238 0 chr2 227784038 227784189 -25472394 + MIR SINE MIR 61 247 -15 466 291 68 10 chr2 227786764 227786954 -25469629 + MIR SINE MIR 40 244 -18 388 265 133 38 chr2 227787854 227788065 -25468518 + MIR SINE MIR 2 232 -30 364 272 97 26 chr2 227789827 227789941 -25466642 - L2 LINE L2 0 3313 3192 434 300 83 6 chr2 227790289 227790469 -25466114 - L3b LINE CR1 -110 1473 1280 260 344 42 0 chr2 227791639 227791735 -25464848 + MIR SINE MIR 85 184 -78 572 259 46 18 chr2 227793240 227793425 -25463158 - MIR SINE MIR -63 145 1 269 204 197 58 chr2 227794236 227794373 -25462210 - MIR SINE MIR -57 205 50 375 276 138 26 chr2 227796180 227796246 -25460337 - MER5A DNA MER1_type -4 185 128 288 0 0 0 chr2 227796246 227796278 -25460305 + (CA)n Simple_repeat Simple_repeat 1 32 0 375 276 138 26 chr2 227796278 227796363 -25460220 - MER5A DNA MER1_type -61 128 17 409 309 164 34 chr2 227796463 227796670 -25459913 + MIR SINE MIR 29 262 0 498 33 0 0 chr2 227797377 227797437 -25459146 + (CA)n Simple_repeat Simple_repeat 1 60 0 477 269 31 19 chr2 227797472 227797632 -25458951 - MIR3 SINE MIR -27 181 20 620 159 135 61 chr2 227798027 227798190 -25458393 + MER96 DNA MER1_type 1 175 0 485 288 37 4 chr2 227798215 227798452 -25458131 - MIR SINE MIR 0 262 15 180 294 106 69 chr2 227799583 227799743 -25456840 - MIR3 SINE MIR -32 176 11 2028 89 92 0 chr2 227801176 227801458 -25455125 - AluSc SINE Alu -1 308 1 335 280 93 8 chr2 227801963 227802081 -25454502 + MIR3 SINE MIR 59 186 -22 192 147 0 0 chr2 227802148 227802182 -25454401 + L2 LINE L2 3241 3274 -39 260 373 29 34 chr2 227802423 227802627 -25453956 + MIR SINE MIR 60 262 0 649 268 120 0 chr2 227802629 227802838 -25453745 + MIR SINE MIR 15 248 -14 988 241 120 77 chr2 227803964 227804222 -25452361 - L2 LINE L2 -1 3312 3067 2075 116 7 7 chr2 227804222 227804525 -25452058 + AluSx SINE Alu 1 303 -9 988 241 120 77 chr2 227804525 227804862 -25451721 - L2 LINE L2 -246 3067 2686 399 328 65 27 chr2 227804835 227805021 -25451562 - MIR SINE MIR -57 205 13 * 188 341 11 11 chr2 227805161 227805249 -25451334 - L3b LINE CR1 -185 1398 1311 323 394 78 19 chr2 227807042 227807311 -25449272 + L1ME4a LINE L1 5825 6109 -12 285 186 10 39 chr2 227807634 227807736 -25448847 + G-rich Low_complexity Low_complexity 4 102 0 868 243 69 5 chr2 227808426 227808644 -25447939 - MIR SINE MIR 0 262 31 737 222 138 0 chr2 227810057 227810260 -25446323 - MIR SINE MIR -25 237 7 357 255 97 48 chr2 227810314 227810459 -25446124 - MIR SINE MIR -19 243 92 844 296 56 70 chr2 227810709 227811225 -25445358 + L2 LINE L2 2804 3312 -1 419 354 54 6 chr2 227811273 227811474 -25445109 - MIR SINE MIR -1 261 51 2343 136 7 21 chr2 227811477 227811897 -25444686 + Ricksha DNA DNA 2323 2736 -118 2251 164 46 20 chr2 227812303 227812598 -25443985 - L1MB4 LINE L1 0 6180 5869 2316 127 53 24 chr2 227812598 227812976 -25443607 + MLT1B LTR MaLR 1 389 -1 2251 164 46 20 chr2 227812976 227813119 -25443464 - L1MB4 LINE L1 -311 5869 5731 195 323 301 0 chr2 227813190 227813323 -25443260 - MIR SINE MIR -14 248 76 293 293 85 0 chr2 227813350 227813456 -25443127 - MIR SINE MIR -15 247 133 197 358 30 15 chr2 227813858 227813992 -25442591 - L2 LINE L2 -336 2977 2842 462 338 140 9 chr2 227816339 227816797 -25439786 + L2 LINE L2 2364 2881 -433 404 268 104 10 chr2 227816822 227817001 -25439582 - MIR SINE MIR -65 143 3 188 305 34 0 chr2 227817001 227817056 -25439527 - L2 LINE L2 -202 3070 3014 323 310 120 14 chr2 227817702 227817844 -25438739 - L2 LINE L2 -5 3267 3111 273 278 56 49 chr2 227818364 227818526 -25438057 - MER104 DNA Tc2 -15 165 3 494 321 96 9 chr2 227818931 227819149 -25437434 + MIR SINE MIR 20 256 -6 534 265 0 27 chr2 227819203 227819350 -25437233 - MIR SINE MIR -12 250 108 540 310 43 5 chr2 227820672 227820856 -25435727 - MIR SINE MIR -52 210 20 427 296 107 13 chr2 227821560 227821719 -25434864 - MIR3 SINE MIR 0 208 35 464 348 0 7 chr2 227822472 227822627 -25433956 - MIR SINE MIR -107 155 2 195 42 0 0 chr2 227822865 227822889 -25433694 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 184 352 0 0 chr2 227823065 227823119 -25433464 - L3b LINE CR1 -124 1459 1406 472 294 22 0 chr2 227823463 227823599 -25432984 - MIR SINE MIR -12 250 112 302 403 30 17 chr2 227823655 227823888 -25432695 + L2 LINE L2 2924 3159 -113 321 278 37 9 chr2 227824390 227824498 -25432085 - MIR SINE MIR -60 148 38 207 0 0 0 chr2 227825719 227825742 -25430841 + (TAA)n Simple_repeat Simple_repeat 2 24 0 819 272 49 5 chr2 227825742 227825966 -25430617 - MIR SINE MIR -8 254 21 182 211 0 0 chr2 227827738 227827776 -25428807 - MIR SINE MIR -56 152 115 380 316 94 24 chr2 227828305 227828517 -25428066 - L3 LINE CR1 -3 1574 1348 230 301 19 10 chr2 227829419 227829522 -25427061 + C-rich Low_complexity Low_complexity 3 106 0 216 167 0 0 chr2 227829744 227829780 -25426803 + G-rich Low_complexity Low_complexity 5 40 0 250 239 15 0 chr2 227830472 227830539 -25426044 + (CA)n Simple_repeat Simple_repeat 2 69 0 327 276 86 0 chr2 227831369 227831474 -25425109 + L1MC4 LINE L1 7852 7965 -77 344 323 65 72 chr2 227832843 227833122 -25423461 + L2 LINE L2 2996 3272 0 297 0 0 0 chr2 227833612 227833645 -25422938 + (TC)n Simple_repeat Simple_repeat 1 33 0 234 0 0 0 chr2 227833644 227833670 -25422913 + (CA)n Simple_repeat Simple_repeat 1 26 0 * 210 300 0 29 chr2 227833959 227834029 -25422554 + GA-rich Low_complexity Low_complexity 3 70 0 205 205 0 0 chr2 227834055 227834094 -25422489 + L2 LINE L2 3221 3259 -13 192 305 152 9 chr2 227834622 227834727 -25421856 - MIR SINE MIR -62 146 27 306 276 49 24 chr2 227835758 227835881 -25420702 + MIR3 SINE MIR 11 136 -72 197 281 180 7 chr2 227835978 227836117 -25420466 - L3 LINE CR1 -3 1574 1412 917 328 163 19 chr2 227836164 227836416 -25420167 + L3 LINE CR1 407 621 -956 195 42 0 0 chr2 227836416 227836440 -25420143 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 917 328 163 19 chr2 227836440 227836935 -25419648 + L3 LINE CR1 621 1262 -315 209 272 9 53 chr2 227837395 227837509 -25419074 + CT-rich Low_complexity Low_complexity 5 113 0 221 217 0 22 chr2 227837859 227837905 -25418678 + MIR SINE MIR 81 125 -83 513 277 24 12 chr2 227838032 227838198 -25418385 - MIR SINE MIR 0 262 95 408 343 48 9 chr2 227838617 227838827 -25417756 - L2 LINE L2 -5 3308 3091 637 300 49 24 chr2 227838834 227839081 -25417502 - MIR SINE MIR -8 254 2 180 0 0 0 chr2 227839144 227839164 -25417419 + (CA)n Simple_repeat Simple_repeat 1 20 0 268 238 127 69 chr2 227839533 227839722 -25416861 - MIR3 SINE MIR -1 207 8 264 100 0 0 chr2 227841060 227841100 -25415483 + (ATG)n Simple_repeat Simple_repeat 2 41 0 478 328 55 16 chr2 227841117 227841300 -25415283 - MIR SINE MIR -45 217 28 230 333 9 0 chr2 227841570 227841681 -25414902 + (CA)n Simple_repeat Simple_repeat 1 112 0 913 133 0 0 chr2 227842851 227842979 -25413604 - FLAM_C SINE Alu -5 128 1 220 122 0 24 chr2 227843312 227843353 -25413230 + (CA)n Simple_repeat Simple_repeat 2 41 0 238 306 40 32 chr2 227843390 227843514 -25413069 - MIR SINE MIR -65 143 43 759 230 15 82 chr2 227844288 227844679 -25411904 + L1MC5 LINE L1 7562 7926 -35 234 0 0 0 chr2 227844680 227844706 -25411877 + (CA)n Simple_repeat Simple_repeat 1 26 0 21 71 0 0 chr2 227844780 227844822 -25411761 + AT_rich Low_complexity Low_complexity 1 42 0 429 309 48 6 chr2 227845210 227845423 -25411160 - MIR SINE MIR -39 223 1 384 262 12 128 chr2 227845744 227845983 -25410600 + MIR SINE MIR 13 226 -36 180 0 0 0 chr2 227846675 227846695 -25409888 + (GGA)n Simple_repeat Simple_repeat 3 22 0 365 256 38 68 chr2 227846880 227847013 -25409570 - MIR SINE MIR -59 203 75 256 356 65 46 chr2 227847357 227847618 -25408965 - L3b LINE CR1 -115 1468 1203 234 0 0 0 chr2 227847912 227847938 -25408645 + (CA)n Simple_repeat Simple_repeat 1 26 0 180 0 0 0 chr2 227847937 227847957 -25408626 + (GA)n Simple_repeat Simple_repeat 2 21 0 * 1741 184 106 6 chr2 227848449 227848808 -25407775 + MLT2C1 LTR ERVL 1 395 -2 2319 84 3 0 chr2 227848838 227849136 -25407447 + AluSp SINE Alu 1 299 -14 1723 216 45 6 chr2 227849163 227849742 -25406841 + L1MD3 LINE L1 6927 7984 -11 387 310 45 0 chr2 227850094 227850249 -25406334 - MIR SINE MIR -50 212 51 639 213 38 0 chr2 227850252 227850435 -25406148 + L1MA4 LINE L1 6111 6300 0 939 132 0 69 chr2 227850438 227850597 -25405986 + AluJb SINE Alu 1 148 -164 509 307 52 2 chr2 227850901 227851105 -25405478 - MIR SINE MIR -42 220 3 429 238 86 53 chr2 227851108 227851259 -25405324 + MIR SINE MIR 46 201 -61 335 267 92 113 chr2 227851910 227852105 -25404478 - MIR SINE MIR -13 249 59 225 346 0 10 chr2 227852675 227852776 -25403807 + CT-rich Low_complexity Low_complexity 2 101 0 402 115 0 0 chr2 227852940 227853001 -25403582 + (TG)n Simple_repeat Simple_repeat 2 62 0 273 286 183 0 chr2 227853248 227853374 -25403209 + MER5A DNA MER1_type 26 174 -15 218 323 110 39 chr2 227853505 227853660 -25402923 + MIR SINE MIR 27 192 -70 2305 60 0 7 chr2 227853712 227854033 -25402550 + AluY SINE Alu 1 319 0 3831 198 56 20 chr2 227854058 227855360 -25401223 + L1MB8 LINE L1 3196 4450 -1728 2050 128 3 13 chr2 227855360 227855673 -25400910 - AluSx SINE Alu -2 310 1 3831 198 56 20 chr2 227855673 227856527 -25400056 + L1MB8 LINE L1 4450 5272 -906 2023 169 74 61 chr2 227856527 227856988 -25399595 + MLT1C LTR MaLR 1 467 0 3831 198 56 20 chr2 227856988 227857590 -25398993 + L1MB8 LINE L1 5272 6178 0 2512 217 38 7 chr2 227857755 227858363 -25398220 - L1ME1 LINE L1 -4 6162 5536 577 196 14 43 chr2 227858373 227858511 -25398072 + MER5B DNA MER1_type 45 178 0 809 315 16 4 chr2 227858731 227858985 -25397598 - MIR SINE MIR -3 259 3 496 181 0 24 chr2 227859491 227859619 -25396964 + L1MD3 LINE L1 6237 7994 0 1873 144 3 41 chr2 227859746 227860065 -25396518 + AluJb SINE Alu 1 307 -5 1602 239 52 2 chr2 227860509 227860953 -25395630 + L1ME3 LINE L1 5697 6162 0 229 333 13 13 chr2 227861410 227861485 -25395098 - MIR SINE MIR -168 94 20 2617 178 8 32 chr2 227861543 227862078 -25394505 + MLT1F LTR MaLR 1 522 -20 755 325 104 37 chr2 227862272 227862915 -25393668 + L2 LINE L2 2348 3197 -75 289 361 47 12 chr2 227863634 227863803 -25392780 + MIR SINE MIR 88 262 0 823 247 33 12 chr2 227864245 227864478 -25392105 - MIR SINE MIR -11 251 18 214 254 0 32 chr2 227865236 227865299 -25391284 + C-rich Low_complexity Low_complexity 4 64 0 31 26 0 0 chr2 227865333 227865371 -25391212 + GC_rich Low_complexity Low_complexity 1 38 0 344 125 16 0 chr2 227865575 227865639 -25390944 + GA-rich Low_complexity Low_complexity 1 65 0 338 238 0 10 chr2 227865945 227866046 -25390537 + (CA)n Simple_repeat Simple_repeat 1 100 0 264 30 0 0 chr2 227866185 227866218 -25390365 + (CA)n Simple_repeat Simple_repeat 2 34 0 360 0 0 0 chr2 227867171 227867211 -25389372 + (GA)n Simple_repeat Simple_repeat 2 41 0 203 250 0 0 chr2 227867213 227867253 -25389330 + L2 LINE L2 3266 3305 -8 560 284 128 47 chr2 227867476 227867797 -25388786 + L2 LINE L2 2924 3270 -43 290 212 61 0 chr2 227867805 227867871 -25388712 - MER91A DNA MER1_type -8 188 119 616 276 66 17 chr2 227867878 227868059 -25388524 - MER91A DNA MER1_type -6 190 1 2806 191 7 51 chr2 227868562 227869053 -25387530 + MLT1F LTR MaLR 1 465 -77 1863 152 3 16 chr2 227869053 227869356 -25387227 - AluJb SINE Alu -1 311 13 2806 191 7 51 chr2 227869356 227869430 -25387153 + MLT1F LTR MaLR 465 541 -1 2132 163 31 41 chr2 227870498 227870916 -25385667 + MLT2D LTR ERVL 1 414 0 1301 73 3 213 chr2 227870986 227871142 -25385441 - MER30 DNA MER1_type 0 230 43 1623 153 0 18 chr2 227871142 227871416 -25385167 - AluJo SINE Alu -1 311 43 2067 124 0 10 chr2 227871416 227871721 -25384862 - AluSg SINE Alu -5 305 2 1301 73 3 213 chr2 227871721 227871850 -25384733 - MER30 DNA MER1_type -185 45 4 590 263 29 86 chr2 227871941 227872071 -25384512 - MIR SINE MIR -1 261 150 2309 92 3 13 chr2 227872071 227872387 -25384196 - AluSp SINE Alu 0 313 1 590 263 29 86 chr2 227872387 227872499 -25384084 - MIR SINE MIR -112 150 33 412 267 27 53 chr2 227872701 227872851 -25383732 - MIR3 SINE MIR -45 163 18 357 82 0 0 chr2 227873391 227873440 -25383143 + (CA)n Simple_repeat Simple_repeat 1 49 0 410 306 25 38 chr2 227873681 227873841 -25382742 - MIR3 SINE MIR -34 174 17 271 292 169 0 chr2 227874445 227874534 -25382049 - MER91A DNA MER1_type -92 104 1 442 267 83 16 chr2 227875426 227875613 -25380970 + MIR SINE MIR 44 249 -13 287 349 124 48 chr2 227875688 227876213 -25380370 - L2 LINE L2 -351 2963 2399 254 189 35 47 chr2 227876580 227876749 -25379834 + (CA)n Simple_repeat Simple_repeat 1 167 0 209 217 39 44 chr2 227876765 227876945 -25379638 + (CA)n Simple_repeat Simple_repeat 2 180 0 673 321 24 10 chr2 227878098 227878388 -25378195 - L1ME3 LINE L1 -127 6035 5742 279 296 11 22 chr2 227879214 227879393 -25377190 + (CAGA)n Simple_repeat Simple_repeat 4 180 0 * 484 254 11 22 chr2 227879270 227879451 -25377132 + GA-rich Low_complexity Low_complexity 2 180 0 319 209 148 0 chr2 227879455 227879570 -25377013 + L1MC4 LINE L1 6894 7025 -1017 1662 157 6 22 chr2 227879607 227879920 -25376663 + MER7A DNA MER2_type 41 346 0 1948 243 80 14 chr2 227879933 227880558 -25376025 + L1MC4 LINE L1 7240 7905 -137 300 269 208 8 chr2 227881528 227881658 -25374925 + MIR3 SINE MIR 10 165 -43 322 282 86 31 chr2 227881977 227882140 -25374443 + L3 LINE CR1 1246 1417 -160 262 375 80 23 chr2 227883090 227883800 -25372783 + L2 LINE L2 2313 3062 -210 605 267 82 50 chr2 227883899 227884217 -25372366 - L1MC4 LINE L1 -255 7787 7460 549 265 41 6 chr2 227884304 227884474 -25372109 + MIR SINE MIR 84 259 -3 216 0 0 0 chr2 227884878 227884902 -25371681 + (TC)n Simple_repeat Simple_repeat 1 24 0 180 0 0 0 chr2 227884931 227884951 -25371632 + (TC)n Simple_repeat Simple_repeat 1 20 0 210 281 0 0 chr2 227885074 227885131 -25371452 - MIR SINE MIR -35 227 171 1590 190 7 0 chr2 227885181 227885455 -25371128 - AluJo SINE Alu -36 276 1 181 229 48 96 chr2 227885457 227885540 -25371043 + L2 LINE L2 2999 3077 -195 658 225 230 9 chr2 227885934 227886147 -25370436 - MIR SINE MIR 0 262 3 289 268 209 39 chr2 227886478 227886631 -25369952 - MIR3 SINE MIR -25 183 5 432 350 68 10 chr2 227887164 227887403 -25369180 - MIR SINE MIR -8 254 3 2157 127 0 9 chr2 227887526 227887841 -25368742 + AluSx SINE Alu 1 312 0 238 391 81 0 chr2 227887912 227888073 -25368510 - MIR SINE MIR -10 252 79 185 97 16 65 chr2 227889686 227889748 -25366835 + (TCC)n Simple_repeat Simple_repeat 1 59 0 207 283 0 0 chr2 227890264 227890310 -25366273 + polypyrimidine Low_complexity Low_complexity 3 48 0 241 319 14 29 chr2 227890420 227890558 -25366025 + C-rich Low_complexity Low_complexity 4 139 0 216 186 267 12 chr2 227892279 227892365 -25364218 + L2 LINE L2 3165 3272 0 354 216 78 10 chr2 227892923 227893025 -25363558 + MIR3 SINE MIR 90 198 -10 25 51 0 0 chr2 227893416 227893455 -25363128 + AT_rich Low_complexity Low_complexity 1 39 0 296 350 107 0 chr2 227893546 227893686 -25362897 - MIR3 SINE MIR -50 158 4 456 276 52 0 chr2 227893970 227894086 -25362497 - MIR SINE MIR -107 155 34 436 289 56 14 chr2 227894468 227894610 -25361973 + MER91A DNA MER1_type 49 196 0 933 250 47 4 chr2 227895552 227895788 -25360795 - MIR SINE MIR -14 248 3 224 208 21 0 chr2 227895992 227896040 -25360543 + C-rich Low_complexity Low_complexity 6 54 0 232 246 0 31 chr2 227896155 227896220 -25360363 + C-rich Low_complexity Low_complexity 4 66 0 21 36 0 0 chr2 227897032 227897060 -25359523 + GC_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr2 227897318 227897347 -25359236 + GC_rich Low_complexity Low_complexity 1 29 0 231 164 0 66 chr2 227897931 227897992 -25358591 + (CAGAGA)n Simple_repeat Simple_repeat 4 60 0 2189 103 0 26 chr2 227899608 227899920 -25356663 + AluSx SINE Alu 1 304 -8 312 322 110 51 chr2 227901232 227901487 -25355096 + L2 LINE L2 3043 3312 -1 603 84 0 0 chr2 227901495 227901590 -25354993 + (GGAA)n Simple_repeat Simple_repeat 4 98 0 432 196 45 0 chr2 227901822 227901945 -25354638 - MIR SINE MIR -60 148 20 197 128 0 26 chr2 227901981 227902020 -25354563 + (AGGGGG)n Simple_repeat Simple_repeat 1 38 0 505 270 8 89 chr2 227902108 227902356 -25354227 - L3b LINE CR1 -188 1395 1168 207 276 13 26 chr2 227902639 227902715 -25353868 + GA-rich Low_complexity Low_complexity 5 79 0 456 259 53 7 chr2 227904244 227904386 -25352197 + MIR SINE MIR 42 189 -62 2267 125 0 6 chr2 227905436 227905748 -25350835 + AluSg SINE Alu 1 310 0 301 307 0 58 chr2 227906655 227906792 -25349791 + HAL1 LINE L1 3 131 -2376 436 278 67 19 chr2 227907057 227907266 -25349317 + HAL1 LINE L1 134 352 -2155 317 260 52 21 chr2 227907395 227907491 -25349092 + HAL1 LINE L1 679 777 -1730 433 208 54 60 chr2 227907527 227907695 -25348888 + HAL1 LINE L1 910 1076 -1431 625 283 22 16 chr2 227909695 227909879 -25346704 - MIR3 SINE MIR -3 205 21 206 308 56 28 chr2 227909988 227910095 -25346488 + MIR SINE MIR 27 136 -72 382 281 222 5 chr2 227910415 227910600 -25345983 + MIR SINE MIR 21 245 -17 4749 231 31 48 chr2 227910905 227911432 -25345151 - MER65-int LTR ERV1 -694 4177 3643 2360 89 3 13 chr2 227911432 227911747 -25344836 + AluSq SINE Alu 1 312 -1 4749 231 31 48 chr2 227911747 227912746 -25343837 - MER65-int LTR ERV1 -1228 3643 2677 238 203 270 7 chr2 227912835 227912983 -25343600 - MER113 DNA MER1_type? -330 191 5 255 152 0 0 chr2 227913433 227913479 -25343104 + (CA)n Simple_repeat Simple_repeat 2 47 0 346 288 94 47 chr2 227914201 227914371 -25342212 + MIR3 SINE MIR 30 207 -1 225 191 24 0 chr2 227914488 227914530 -25342053 + MIR3 SINE MIR 139 181 -27 482 249 228 25 chr2 227914541 227914738 -25341845 - MIR SINE MIR -6 256 20 296 312 171 0 chr2 227915018 227915154 -25341429 - MIR SINE MIR -54 154 16 296 250 14 0 chr2 227916122 227916194 -25340389 + LTR16B LTR ERVL 1 73 -391 2037 126 0 3 chr2 227916198 227916492 -25340091 - AluSx SINE Alu -6 306 14 805 161 87 13 chr2 227916631 227916780 -25339803 - FRAM SINE Alu 0 176 17 262 307 126 22 chr2 227916816 227917047 -25339536 + LTR16B LTR ERVL 206 460 -4 280 227 45 34 chr2 227917131 227917219 -25339364 - MIR SINE MIR -126 136 48 267 293 145 41 chr2 227918293 227918535 -25338048 + L2 LINE L2 2819 3085 -187 207 321 69 46 chr2 227919426 227919557 -25337026 - L2 LINE L2 -16 3256 3123 1076 253 100 66 chr2 227920360 227920858 -25335725 + L1ME3A LINE L1 5644 6158 -12 521 260 188 45 chr2 227921200 227921535 -25335048 + L2 LINE L2 2931 3313 0 363 246 43 59 chr2 227921609 227921800 -25334783 + MIR3 SINE MIR 32 225 -37 686 210 3 0 chr2 227921800 227922108 -25334475 + (TG)n Simple_repeat Simple_repeat 1 309 0 640 172 6 6 chr2 227922141 227922321 -25334262 + (TG)n Simple_repeat Simple_repeat 1 180 0 628 186 11 0 chr2 227922355 227922532 -25334051 + (TG)n Simple_repeat Simple_repeat 1 179 0 182 194 28 0 chr2 227922611 227922647 -25333936 + L3 LINE CR1 1539 1575 -2 306 355 35 7 chr2 227926391 227926532 -25330051 - MIR3 SINE MIR -10 198 54 269 212 202 10 chr2 227926658 227926757 -25329826 - HAL1 LINE L1 -418 2089 1972 817 205 74 0 chr2 227926866 227927056 -25329527 - L1M4 LINE L1 -1450 4696 4493 1055 255 36 17 chr2 227927056 227927358 -25329225 - MER93a LTR ERV1 -14 388 81 257 223 58 48 chr2 227927436 227927539 -25329044 - MER31-int LTR ERV1 -464 7352 7249 845 220 120 85 chr2 227928027 227928559 -25328024 - MER31-int LTR ERV1 -201 4735 4185 3232 145 62 173 chr2 227928564 227929838 -25326745 - MER52A LTR ERV1 -13 1265 211 308 250 75 0 chr2 227929814 227929894 -25326689 - MER52A LTR ERV1 -1669 86 1 * 5390 82 6 17 chr2 227930041 227930849 -25325734 - L1PA13 LINE L1 0 6163 5365 322 177 16 0 chr2 227930849 227930911 -25325672 - MER31-int LTR ERV1 -939 5392 5330 * 2513 215 104 72 chr2 227930910 227931382 -25325201 - MER31-int LTR ERV1 -1282 5049 4594 2498 108 29 55 chr2 227931382 227931419 -25325164 - L1MA5A LINE L1 -17 6280 6244 2437 51 3 7 chr2 227931419 227931715 -25324868 - AluY SINE Alu -16 295 1 2498 108 29 55 chr2 227931715 227932130 -25324453 - L1MA5A LINE L1 -53 6244 5840 2513 215 104 72 chr2 227932130 227933265 -25323318 - MER31-int LTR ERV1 -1737 4594 2061 22 56 0 0 chr2 227933466 227933502 -25323081 + AT_rich Low_complexity Low_complexity 1 36 0 2026 128 63 0 chr2 227933614 227934187 -25322396 - L1P4 LINE L1 -550 5613 5010 497 242 20 61 chr2 227934250 227934448 -25322135 - HAL1 LINE L1 -2308 199 10 1216 160 80 25 chr2 227934913 227935099 -25321484 - L1M1 LINE L1 -4629 2936 2729 2360 97 0 19 chr2 227935099 227935418 -25321165 - AluSp SINE Alu 0 313 1 1216 160 80 25 chr2 227935418 227935506 -25321077 - L1M1 LINE L1 -4836 2729 2647 846 206 39 147 chr2 227935506 227935977 -25320606 + LTR28 LTR ERV1 1 1229 -137 225 163 0 0 chr2 227936216 227936259 -25320324 - L1M1 LINE L1 -4920 2645 2603 250 247 13 52 chr2 227936260 227936337 -25320246 + LTR57-int LTR ERVL 1089 1162 -4181 * 356 193 17 80 chr2 227936269 227936427 -25320156 + MER65C-int LTR ERV1 1458 3226 -3105 541 165 0 115 chr2 227936442 227936642 -25319941 + MER65C-int LTR ERV1 1340 1902 -4856 640 211 9 0 chr2 227936658 227936772 -25319811 - FLAM_C SINE Alu -16 127 13 347 236 51 25 chr2 227936921 227937078 -25319505 + MER65C-int LTR ERV1 1559 1719 -6401 180 0 0 0 chr2 227937179 227937199 -25319384 + (A)n Simple_repeat Simple_repeat 1 20 0 426 303 21 54 chr2 227937217 227937458 -25319125 + MER65C-int LTR ERV1 2939 3171 -1709 607 209 45 65 chr2 227937759 227937960 -25318623 + MER65C-int LTR ERV1 3536 3732 -2866 664 181 73 34 chr2 227938047 227938224 -25318359 + MER65C-int LTR ERV1 3730 3913 -2685 685 216 0 9 chr2 227938225 227938341 -25318242 + FLAM_A SINE Alu 1 115 -18 23 0 0 0 chr2 227938343 227938366 -25318217 + AT_rich Low_complexity Low_complexity 1 23 0 180 77 0 0 chr2 227938558 227938584 -25317999 + (TTA)n Simple_repeat Simple_repeat 2 27 0 803 225 0 0 chr2 227938598 227938749 -25317834 - AluJo SINE Alu -40 272 122 2393 220 124 45 chr2 227938749 227938957 -25317626 + MER65C-int LTR ERV1 2732 2922 -2014 1835 153 0 48 chr2 227938957 227939123 -25317460 - AluJb SINE Alu -13 299 153 2282 60 42 3 chr2 227939123 227939408 -25317175 - AluY SINE Alu -15 296 1 1835 153 0 48 chr2 227939408 227939555 -25317028 - AluJb SINE Alu -159 153 1 2393 220 124 45 chr2 227939555 227939883 -25316700 + MER65C-int LTR ERV1 2922 3223 -1713 2160 143 0 0 chr2 227939883 227940183 -25316400 + AluSx SINE Alu 1 300 -12 2393 220 124 45 chr2 227940183 227940628 -25315955 + MER65C-int LTR ERV1 3223 3792 -1144 252 216 175 28 chr2 227940668 227940735 -25315848 + MER65C-int LTR ERV1 4135 4133 -803 2144 122 0 0 chr2 227940735 227941021 -25315562 + AluSx SINE Alu 13 298 -14 252 216 175 28 chr2 227941021 227941096 -25315487 + MER65C-int LTR ERV1 4132 4195 -741 1573 264 62 31 chr2 227941134 227941646 -25314937 + MER65C-int LTR ERV1 3636 4163 -708 303 316 30 43 chr2 227941853 227942087 -25314496 + MER65C-int LTR ERV1 4495 4725 -146 1384 230 58 29 chr2 227942211 227942414 -25314169 + MER65C LTR ERV1 1 197 -264 2210 113 26 3 chr2 227942414 227942716 -25313867 + AluSx SINE Alu 1 309 -3 1384 230 58 29 chr2 227942716 227942960 -25313623 + MER65C LTR ERV1 197 461 0 1156 285 109 15 chr2 227943135 227943739 -25312844 - L1MB7 LINE L1 0 6184 5524 313 335 51 34 chr2 227943887 227944063 -25312520 - L1ME3A LINE L1 -1 6169 5991 488 286 6 22 chr2 227944127 227944305 -25312278 + MLT2F LTR ERVL 1 175 -488 344 212 20 30 chr2 227944713 227944812 -25311771 - MLT1L LTR MaLR 0 615 518 3351 189 14 58 chr2 227944862 227945315 -25311268 - L1MB4 LINE L1 0 6180 5776 180 0 0 0 chr2 227945315 227945335 -25311248 + (TTCA)n Simple_repeat Simple_repeat 3 22 0 3351 189 14 58 chr2 227945335 227945681 -25310902 - L1MB4 LINE L1 -404 5776 5416 243 314 98 39 chr2 227947288 227947594 -25308989 - MARNA DNA Mariner -126 460 137 2471 69 0 23 chr2 227947728 227948033 -25308550 + AluY SINE Alu 1 298 -13 1951 127 11 3 chr2 227948041 227948362 -25308221 + AluSx SINE Alu 1 323 0 1249 178 39 12 chr2 227948936 227949195 -25307388 + L1M4 LINE L1 5445 5710 -474 204 132 0 26 chr2 227950867 227950905 -25305678 + (AGGGGG)n Simple_repeat Simple_repeat 3 39 0 1701 101 40 0 chr2 227951783 227952011 -25304572 - AluSq SINE Alu -2 311 75 21 57 0 0 chr2 228152830 228152865 -25103718 + AT_rich Low_complexity Low_complexity 1 35 0 306 50 0 0 chr2 228152910 228152950 -25103633 + (CA)n Simple_repeat Simple_repeat 2 41 0 273 149 231 67 chr2 228153394 228153426 -25103157 - L1MA7 LINE L1 -33 6258 6233 874 236 80 22 chr2 228153426 228153702 -25102881 - AluJb SINE Alu -9 293 2 273 149 231 67 chr2 228153702 228153803 -25102780 - L1MA7 LINE L1 -58 6233 6103 385 147 0 44 chr2 228153893 228153961 -25102622 + MER1B DNA MER1_type 211 275 -64 323 182 0 0 chr2 228154118 228154173 -25102410 + MER1B DNA MER1_type 269 323 -16 502 241 9 0 chr2 228154183 228154291 -25102292 - FLAM_C SINE Alu -32 111 3 183 167 0 0 chr2 228156774 228156816 -25099767 + (CCA)n Simple_repeat Simple_repeat 1 42 0 198 0 0 0 chr2 228158022 228158044 -25098539 + (GGCTG)n Simple_repeat Simple_repeat 1 22 0 405 0 0 0 chr2 228161362 228161407 -25095176 + (TG)n Simple_repeat Simple_repeat 2 46 0 419 212 8 61 chr2 228161449 228161476 -25095107 - AluSg/x SINE Alu -3 309 282 327 25 0 0 chr2 228161476 228161516 -25095067 + (TG)n Simple_repeat Simple_repeat 2 41 0 419 212 8 61 chr2 228161516 228161620 -25094963 - AluSg/x SINE Alu -30 282 185 333 0 0 0 chr2 228163173 228163210 -25093373 + (TTTTG)n Simple_repeat Simple_repeat 1 37 0 493 183 12 0 chr2 228163217 228163299 -25093284 - AluSg/x SINE Alu -38 271 189 715 325 157 17 chr2 228163369 228163846 -25092737 + L1M4 LINE L1 2860 3403 -2743 333 208 30 0 chr2 228163860 228163961 -25092622 + (TA)n Simple_repeat Simple_repeat 1 104 0 333 282 117 41 chr2 228163969 228164257 -25092326 + L1M4 LINE L1 3414 3736 -2410 2358 130 6 0 chr2 228164742 228165095 -25091488 + THE1A LTR MaLR 1 355 0 1351 156 59 42 chr2 228165201 228165508 -25091075 - AluSx SINE Alu 0 312 1 251 287 77 83 chr2 228165509 228165553 -25091030 - L2 LINE L2 -856 2458 2415 1498 202 3 7 chr2 228165553 228165860 -25090723 - AluSx SINE Alu -6 306 1 251 287 77 83 chr2 228165860 228165996 -25090587 - L2 LINE L2 -899 2415 2279 2113 263 54 56 chr2 228169384 228171104 -25085479 + L1MA8 LINE L1 4559 6268 -23 22 0 0 0 chr2 228171162 228171184 -25085399 + AT_rich Low_complexity Low_complexity 1 22 0 335 312 0 21 chr2 228171280 228171373 -25085210 - L1MC4 LINE L1 -1339 6703 6613 324 257 46 64 chr2 228171328 228171437 -25085146 + L1MCa LINE L1 1995 2101 -4325 * 826 255 27 54 chr2 228171550 228171848 -25084735 + AluJb SINE Alu 13 302 -10 356 323 104 10 chr2 228171855 228172047 -25084536 + L1M4c LINE L1 1150 1359 -5025 221 203 0 47 chr2 228172156 228172220 -25084363 + GA-rich Low_complexity Low_complexity 1 61 0 468 72 0 0 chr2 228174506 228174575 -25082008 + (CA)n Simple_repeat Simple_repeat 2 70 0 198 0 0 0 chr2 228178331 228178353 -25078230 + (GGCTG)n Simple_repeat Simple_repeat 1 22 0 1825 148 0 0 chr2 228182043 228182326 -25074257 + AluSq SINE Alu 1 283 -30 305 300 136 39 chr2 228183045 228183325 -25073258 + L2 LINE L2 2196 2502 -812 201 315 27 27 chr2 228184588 228184661 -25071922 - MER5A DNA MER1_type -74 115 43 231 340 38 0 chr2 228185120 228185279 -25071304 + L1M3 LINE L1 5353 5517 -654 23 0 0 0 chr2 228185404 228185427 -25071156 + AT_rich Low_complexity Low_complexity 1 23 0 27 29 0 0 chr2 228186047 228186081 -25070502 + AT_rich Low_complexity Low_complexity 1 34 0 1720 150 0 26 chr2 228188779 228189092 -25067491 + AluSc SINE Alu 2 306 -3 226 178 89 0 chr2 228189358 228189403 -25067180 + L2 LINE L2 3212 3260 -12 1743 142 7 3 chr2 228189569 228189871 -25066712 - AluSc SINE Alu -6 303 1 1560 176 0 10 chr2 228191872 228192173 -25064410 + AluSg SINE Alu 1 298 -12 21 0 0 0 chr2 228192450 228192471 -25064112 + AT_rich Low_complexity Low_complexity 1 21 0 870 254 25 25 chr2 228193679 228193915 -25062668 - AluJo SINE Alu -75 237 2 1202 281 95 22 chr2 228195369 228196044 -25060539 - L1MB5 LINE L1 -13 6161 5415 294 143 0 0 chr2 228196058 228196107 -25060476 + L1PA6 LINE L1 6106 6154 0 314 231 175 7 chr2 228196108 228196251 -25060332 - L1MB5 LINE L1 -746 5420 5254 710 181 33 106 chr2 228196411 228196602 -25059981 - L1M4 LINE L1 -583 5601 5427 303 125 0 0 chr2 228196602 228196650 -25059933 + L1PA6 LINE L1 6106 6153 -1 710 181 33 106 chr2 228196650 228196764 -25059819 - L1M4 LINE L1 -757 5427 5306 534 225 60 33 chr2 228196949 228197131 -25059452 - L1M4 LINE L1 -577 5601 5415 296 146 0 0 chr2 228197145 228197193 -25059390 + L1PA6 LINE L1 6106 6153 -1 364 206 38 50 chr2 228197193 228197342 -25059241 - L1M4 LINE L1 -751 5423 5284 505 222 67 39 chr2 228197496 228197676 -25058907 - L1M4 LINE L1 -573 5601 5417 299 93 36 13 chr2 228197676 228197736 -25058847 + L1PA6 LINE L1 6090 6154 -1 255 201 87 57 chr2 228197739 228197942 -25058641 - L1P1 LINE L1 -684 5471 5257 1520 198 3 14 chr2 228199867 228200155 -25056428 + AluSx SINE Alu 3 287 -15 230 167 0 121 chr2 228200186 228200221 -25056362 - L1MA3 LINE L1 -96 6209 6184 1306 234 10 30 chr2 228200221 228200525 -25056058 - AluJo SINE Alu -3 299 2 230 167 0 121 chr2 228200525 228200555 -25056028 - L1MA3 LINE L1 -121 6184 6152 498 279 35 0 chr2 228200572 228200744 -25055839 - L1MA4 LINE L1 -124 6176 5999 279 177 11 0 chr2 228200746 228200811 -25055772 + L1MA4 LINE L1 6223 6289 -11 247 273 0 0 chr2 228200820 228200886 -25055697 + CT-rich Low_complexity Low_complexity 4 69 0 1179 196 3 93 chr2 228200893 228201204 -25055379 - AluSg SINE Alu -13 287 5 809 226 5 0 chr2 228201244 228201430 -25055153 - AluSg/x SINE Alu -1 309 123 315 263 75 38 chr2 228201932 228202065 -25054518 - MLT1A2 LTR MaLR -35 507 370 725 69 20 0 chr2 228207317 228207418 -25049165 - L1P3 LINE L1 -622 5532 5430 2106 92 9 3 chr2 228207418 228207732 -25048851 + L1PA6 LINE L1 5837 6154 0 1603 49 0 0 chr2 228207733 228207938 -25048645 + L1PA2 LINE L1 5951 6155 0 364 304 104 30 chr2 228308971 228309411 -24947172 - L1M4 LINE L1 -768 5876 5404 1969 145 10 3 chr2 228309709 228310006 -24946577 + AluSx SINE Alu 1 299 -13 213 341 30 23 chr2 228310618 228310750 -24945833 - MIR SINE MIR -66 196 64 195 270 139 78 chr2 228310738 228310819 -24945764 + MIR SINE MIR 19 110 -152 * 2053 124 40 3 chr2 228310819 228311117 -24945466 + AluSx SINE Alu 2 310 -2 195 270 139 78 chr2 228311117 228311150 -24945433 + MIR SINE MIR 110 140 -122 2240 116 3 0 chr2 228311189 228311492 -24945091 + AluSq SINE Alu 3 306 -7 1436 201 77 37 chr2 228312047 228312396 -24944187 - MLT1A2 LTR MaLR -11 363 1 21 0 0 0 chr2 228312797 228312818 -24943765 + AT_rich Low_complexity Low_complexity 1 21 0 1816 166 0 14 chr2 228313356 228313645 -24942938 + AluJb SINE Alu 1 285 -27 703 230 155 5 chr2 228314901 228315114 -24941469 - L1MC/D LINE L1 -2133 5675 5431 2356 92 14 0 chr2 228315454 228315748 -24940835 - AluSx SINE Alu -14 298 1 2574 201 120 26 chr2 228315762 228316422 -24940161 - L1ME2 LINE L1 -10 6154 5433 1693 177 54 0 chr2 228316434 228316728 -24939855 - AluJb SINE Alu -2 310 1 377 278 0 9 chr2 228316732 228316840 -24939743 - L1M4 LINE L1 -1236 5408 5302 1647 118 0 0 chr2 228316886 228317107 -24939476 - AluSq SINE Alu -4 309 89 611 119 0 0 chr2 228317207 228317291 -24939292 - AluJ/FLAM SINE Alu -227 85 2 2318 88 3 10 chr2 228317478 228317773 -24938810 + AluSp SINE Alu 1 293 -20 1195 159 30 0 chr2 228318634 228318835 -24937748 - AluSx SINE Alu -105 207 1 925 225 38 0 chr2 228318840 228319053 -24937530 - L1M4 LINE L1 -2368 4276 4056 * 2376 218 40 22 chr2 228319034 228319631 -24936952 - L1M4 LINE L1 -3236 3408 2797 1509 183 9 69 chr2 228319631 228319910 -24936673 - AluJo SINE Alu -14 298 39 1973 123 38 10 chr2 228319910 228320203 -24936380 + AluSx SINE Alu 1 301 -11 1509 183 9 69 chr2 228320203 228320240 -24936343 - AluJo SINE Alu -273 39 1 2376 218 40 22 chr2 228320240 228320351 -24936232 - L1M4 LINE L1 -3847 2797 2689 549 86 0 0 chr2 228320353 228320423 -24936160 + AluS SINE Alu 2 71 -242 2092 122 0 17 chr2 228320424 228320718 -24935865 + AluSx SINE Alu 9 297 -15 468 194 48 0 chr2 228320718 228320821 -24935762 - L1M4 LINE L1 -3948 2698 2591 1204 94 5 5 chr2 228320826 228321033 -24935550 - L1PA15 LINE L1 -1 6164 5895 2028 147 0 0 chr2 228321033 228321332 -24935251 - AluSx SINE Alu -13 299 1 3144 208 47 45 chr2 228321340 228322428 -24934155 - L1M4 LINE L1 -4738 1908 817 620 126 0 101 chr2 228322470 228322548 -24934035 + FLAM_A SINE Alu 36 100 -211 2152 113 7 10 chr2 228322548 228322848 -24933735 - AluSx SINE Alu -13 299 1 620 126 0 101 chr2 228322848 228322888 -24933695 + FLAM_A SINE Alu 100 142 -169 435 285 186 17 chr2 228323006 228323297 -24933286 - L1M4 LINE L1 -6030 616 277 740 256 132 72 chr2 228323309 228323794 -24932789 - LTR33 LTR ERVL -3 518 5 469 271 167 0 chr2 228323977 228324121 -24932462 - MER5A DNA MER1_type -1 188 21 540 269 68 32 chr2 228324124 228324373 -24932210 + HAL1 LINE L1 765 1022 -1485 2585 51 0 0 chr2 228324473 228324784 -24931799 + L1PA3 LINE L1 5845 6155 0 1917 247 115 55 chr2 228324795 228325565 -24931018 + HAL1 LINE L1 1529 2251 -256 1611 193 4 4 chr2 228325565 228325845 -24930738 + AluJb SINE Alu 1 280 -32 621 61 0 0 chr2 228325845 228325927 -24930656 + (GAAA)n Simple_repeat Simple_repeat 4 85 0 1917 247 115 55 chr2 228325927 228326035 -24930548 + HAL1 LINE L1 2250 2461 -46 1725 160 23 10 chr2 228326110 228326410 -24930173 + AluJb SINE Alu 1 304 -8 2258 99 0 3 chr2 228326410 228326704 -24929879 + AluSg SINE Alu 1 293 -17 417 254 169 8 chr2 228327389 228327507 -24929076 + L2 LINE L2 3136 3272 0 192 77 0 0 chr2 228328023 228328049 -24928534 + (CGG)n Simple_repeat Simple_repeat 3 28 0 25 65 0 0 chr2 228328358 228328404 -24928179 + GC_rich Low_complexity Low_complexity 1 46 0 1946 112 30 0 chr2 228330185 228330453 -24926130 - AluSx SINE Alu -14 298 23 867 157 99 5 chr2 228331146 228331337 -24925246 - MER3 DNA MER1_type 0 209 1 198 287 104 26 chr2 228332390 228332505 -24924078 + L2 LINE L2 3149 3272 0 2203 111 3 0 chr2 228332811 228333109 -24923474 + AluSx SINE Alu 1 299 -13 205 233 0 0 chr2 228333533 228333576 -24923007 - L2 LINE L2 -19 3253 3211 393 127 0 0 chr2 228333907 228333962 -24922621 + Tigger7 DNA MER2_type 1 55 -678 2339 102 0 0 chr2 228334078 228334371 -24922212 + AluSg SINE Alu 1 293 -17 258 250 29 0 chr2 228334371 228334439 -24922144 + L1MC5 LINE L1 7839 7908 -53 1940 149 0 7 chr2 228335931 228336227 -24920356 - AluSx SINE Alu -18 294 1 1847 154 6 28 chr2 228336235 228336554 -24920029 - AluJb SINE Alu 0 312 1 420 180 0 167 chr2 228336672 228336822 -24919761 + FLAM_A SINE Alu 6 130 -12 766 164 0 8 chr2 228337777 228337905 -24918678 + FLAM_C SINE Alu 1 127 -16 2287 102 0 3 chr2 228337913 228338208 -24918375 + AluSx SINE Alu 1 294 -18 21 0 0 0 chr2 228338208 228338229 -24918354 + AT_rich Low_complexity Low_complexity 1 21 0 599 108 0 0 chr2 228338399 228338482 -24918101 - AluY SINE Alu -227 84 2 556 213 75 48 chr2 228338482 228338622 -24917961 - MSTD LTR MaLR -203 193 45 1529 140 0 160 chr2 228338622 228338972 -24917611 + AluSx SINE Alu 1 294 -18 556 213 75 48 chr2 228338972 228339019 -24917564 - MSTD LTR MaLR -351 45 1 1947 117 0 15 chr2 228339490 228339756 -24916827 + AluSp SINE Alu 1 262 -51 1334 174 6 98 chr2 228340794 228341110 -24915473 - AluJo SINE Alu -24 288 2 1856 167 0 7 chr2 228341415 228341714 -24914869 + AluSx SINE Alu 3 299 -13 2259 102 3 0 chr2 228342118 228342413 -24914170 + AluSp SINE Alu 1 296 -17 2378 84 10 0 chr2 228343213 228343510 -24913073 - AluSp SINE Alu -13 300 1 2325 88 0 0 chr2 228343589 228343872 -24912711 - AluSc SINE Alu -26 283 1 2257 75 7 10 chr2 228344229 228344522 -24912061 + AluSq SINE Alu 1 292 -21 1289 138 5 5 chr2 228344858 228345047 -24911536 + Tigger7 DNA MER2_type 219 407 -2080 475 195 0 0 chr2 228345068 228345145 -24911438 + Tigger7 DNA MER2_type 2411 2487 0 386 248 72 16 chr2 228345154 228345279 -24911304 - MIR SINE MIR -59 203 72 2099 124 16 0 chr2 228347574 228347881 -24908702 + AluSx SINE Alu 1 312 0 2374 81 7 0 chr2 228347913 228348211 -24908372 + AluY SINE Alu 5 304 -7 344 204 102 0 chr2 228348840 228348928 -24907655 + L1MC5 LINE L1 7479 7575 -386 1002 137 0 18 chr2 228348987 228349155 -24907428 - AluSg/x SINE Alu -14 298 134 2167 102 0 26 chr2 228349155 228349460 -24907123 - AluSx SINE Alu -15 297 1 726 188 49 54 chr2 228349461 228349685 -24906898 + L1MC5 LINE L1 7623 7845 -116 422 86 0 215 chr2 228351391 228351484 -24905099 + tRNA-Tyr-TAC tRNA tRNA 1 73 -3 2045 123 3 20 chr2 228351499 228351799 -24904784 + AluSc SINE Alu 1 295 -14 2167 114 0 23 chr2 228351806 228352112 -24904471 + AluSx SINE Alu 1 299 -13 1669 182 10 7 chr2 228352124 228352254 -24904329 + AluJb SINE Alu 1 129 -183 1689 150 45 28 chr2 228352254 228352540 -24904043 + AluSx SINE Alu 1 291 -21 1669 182 10 7 chr2 228352540 228352700 -24903883 + AluJb SINE Alu 129 292 -20 347 122 0 0 chr2 228353146 228353207 -24903376 - Alu SINE Alu -254 45 1 * 629 200 55 7 chr2 228353207 228353347 -24903236 + MER104 DNA Tc2 34 180 0 2236 110 0 3 chr2 228353583 228353873 -24902710 - AluSx SINE Alu -23 289 1 2223 105 0 10 chr2 228355496 228355792 -24900791 + AluSg1 SINE Alu 4 296 -13 203 146 49 0 chr2 228355943 228355984 -24900599 + (TTTG)n Simple_repeat Simple_repeat 4 46 0 499 298 104 24 chr2 228356482 228356776 -24899807 - L2 LINE L2 -220 3052 2737 385 237 96 27 chr2 228356860 228356993 -24899590 - MER5A DNA MER1_type -19 161 15 194 280 50 50 chr2 228357131 228357231 -24899352 - L2 LINE L2 -871 2443 2344 227 215 266 29 chr2 228357675 228357792 -24898791 + MIR SINE MIR 39 192 -62 2328 64 11 0 chr2 228357818 228358127 -24898456 + AluSp SINE Alu 1 312 0 383 268 114 83 chr2 228358372 228358864 -24897719 + MLT1J LTR MaLR 3 509 -2 268 149 184 105 chr2 228358884 228358998 -24897585 + MER113 DNA MER1_type? 5 127 -394 317 293 27 61 chr2 228359522 228359669 -24896914 + L1MC4a LINE L1 4878 5019 -1127 259 238 62 88 chr2 228359679 228359797 -24896786 + L1MC4a LINE L1 5769 5884 -1924 2001 143 17 0 chr2 228359797 228360084 -24896499 + AluSx SINE Alu 1 292 -20 259 238 62 88 chr2 228360084 228360125 -24896458 + L1MC4a LINE L1 5883 5924 -1884 356 288 82 69 chr2 228360453 228360686 -24895897 + L1MC4a LINE L1 5003 5238 -908 590 271 101 63 chr2 228360692 228360851 -24895732 + L1MC4a LINE L1 5287 5438 -2370 2274 120 0 9 chr2 228360851 228361167 -24895416 + AluSq SINE Alu 1 313 0 590 271 101 63 chr2 228361167 228361550 -24895033 + L1MC4a LINE L1 5438 5850 -1958 344 302 43 0 chr2 228361646 228361698 -24894885 + L1ME4a LINE L1 5997 6045 -76 2448 100 3 0 chr2 228361698 228362009 -24894574 - AluSp SINE Alu -1 312 1 344 302 43 0 chr2 228362009 228362072 -24894511 + L1ME4a LINE L1 6045 6117 -4 187 347 42 47 chr2 228362295 228362508 -24894075 + L2 LINE L2 1435 1646 -1668 243 0 45 45 chr2 228362514 228362558 -24894025 + (TTTC)n Simple_repeat Simple_repeat 1 44 0 2132 130 17 0 chr2 228362796 228363095 -24893488 + AluSx SINE Alu 7 310 -2 304 264 143 106 chr2 228363251 228363987 -24892596 + L2 LINE L2 1722 2484 -830 410 223 99 8 chr2 228363994 228364115 -24892468 + MLT1E LTR MaLR 1 132 -461 2335 109 0 0 chr2 228364115 228364408 -24892175 + AluSx SINE Alu 1 293 -19 834 64 0 0 chr2 228364409 228364518 -24892065 + (TA)n Simple_repeat Simple_repeat 2 110 0 433 241 62 0 chr2 228364559 228364671 -24891912 + MLT1E LTR MaLR 119 237 -356 2224 116 7 0 chr2 228365101 228365404 -24891179 + AluSg SINE Alu 1 305 -5 276 157 0 45 chr2 228365684 228365773 -24890810 + GA-rich Low_complexity Low_complexity 2 86 0 1366 231 26 0 chr2 228366266 228366569 -24890014 + MLT1E LTR MaLR 280 590 -3 1741 166 18 4 chr2 228366703 228367005 -24889578 + AluJo SINE Alu 1 306 0 625 128 0 0 chr2 228367171 228367265 -24889318 - AluSg/x SINE Alu -7 305 212 1076 189 5 15 chr2 228367434 228367630 -24888953 + AluJo SINE Alu 2 195 -117 1687 155 41 35 chr2 228367630 228367920 -24888663 - AluJb SINE Alu -20 292 1 1054 219 0 0 chr2 228367942 228368138 -24888445 + AluJo SINE Alu 1 196 -116 24 0 0 0 chr2 228368138 228368162 -24888421 + AT_rich Low_complexity Low_complexity 1 24 0 1657 182 10 16 chr2 228368162 228368469 -24888114 + AluJb SINE Alu 1 305 -7 365 267 134 0 chr2 228368485 228368657 -24887926 + HAL1 LINE L1 1249 1443 -1064 1432 199 66 49 chr2 228368672 228369140 -24887443 + L1M4 LINE L1 4229 4704 -1442 873 253 132 71 chr2 228369150 228369579 -24887004 + HAL1 LINE L1 1849 2329 -178 1957 128 24 24 chr2 228369579 228369877 -24886706 + AluSx SINE Alu 1 298 -14 873 253 132 71 chr2 228369877 228370068 -24886515 + HAL1 LINE L1 2329 2507 0 1898 177 0 3 chr2 228371056 228371356 -24885227 + AluJb SINE Alu 3 301 -11 297 190 0 0 chr2 228372291 228372349 -24884234 + MLT1K LTR MaLR 524 581 -7 279 271 156 0 chr2 228372513 228372609 -24883974 - L2 LINE L2 0 3313 3203 247 333 20 72 chr2 228375818 228375852 -24880731 + MIR3 SINE MIR 54 88 -120 2038 100 0 8 chr2 228375852 228376138 -24880445 + AluSg SINE Alu 24 307 0 247 333 20 72 chr2 228376138 228376255 -24880328 + MIR3 SINE MIR 88 198 -10 217 186 0 0 chr2 228377748 228377791 -24878792 + L2 LINE L2 3270 3312 -1 1660 187 0 35 chr2 228378053 228378243 -24878340 - AluJo SINE Alu -13 299 123 197 33 33 0 chr2 228378243 228378273 -24878310 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1660 187 0 35 chr2 228378273 228378392 -24878191 - AluJo SINE Alu -189 123 1 531 286 65 33 chr2 228379655 228379900 -24876683 + MLT1K LTR MaLR 319 571 -17 26 30 0 0 chr2 228380126 228380159 -24876424 + AT_rich Low_complexity Low_complexity 1 33 0 28 29 0 0 chr2 228380170 228380205 -24876378 + AT_rich Low_complexity Low_complexity 1 35 0 1838 166 3 33 chr2 228380205 228380512 -24876071 + AluJo SINE Alu 1 298 -14 1187 204 9 0 chr2 228380515 228380736 -24875847 + AluJo SINE Alu 87 309 -3 229 238 48 16 chr2 228380816 228380879 -24875704 + MIR SINE MIR 31 95 -167 256 213 49 16 chr2 228381001 228381062 -24875521 + MIR SINE MIR 122 184 -78 796 235 83 15 chr2 228381076 228381280 -24875303 + MIR SINE MIR 39 256 -6 1370 160 5 5 chr2 228381384 228381603 -24874980 - AluJo SINE Alu -7 305 87 423 0 0 0 chr2 228381614 228381661 -24874922 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 536 135 21 0 chr2 228381746 228381842 -24874741 + GA-rich Low_complexity Low_complexity 3 100 0 617 278 105 20 chr2 228381847 228382239 -24874344 + L1ME4a LINE L1 5697 6121 0 1933 150 24 0 chr2 228382249 228382542 -24874041 + AluSx SINE Alu 3 302 -10 188 299 138 23 chr2 228382874 228382961 -24873622 + L2 LINE L2 3138 3234 -38 628 212 15 0 chr2 228382966 228383098 -24873485 + MER45C DNA AcHobo 16 149 -804 839 163 0 8 chr2 228383099 228383228 -24873355 + FLAM_C SINE Alu 2 129 -4 2366 90 0 0 chr2 228383239 228383528 -24873055 + AluSg SINE Alu 2 290 -20 264 259 102 37 chr2 228383562 228383670 -24872913 + MER45C DNA AcHobo 152 266 -687 1481 149 117 72 chr2 228383692 228384121 -24872462 - LTR7 LTR ERV1 -2 448 1 2258 108 45 13 chr2 228384121 228384501 -24872082 - HERVH LTR ERV1 0 7713 7322 1196 147 18 9 chr2 228384499 228384717 -24871866 - HERVH LTR ERV1 -1894 5819 5600 * 4256 138 1 1 chr2 228384718 228385379 -24871204 - HERVH LTR ERV1 -2564 5149 4489 3321 107 4 6 chr2 228385382 228385885 -24870698 - HERVH LTR ERV1 -3720 3993 3492 867 142 20 0 chr2 228385875 228386023 -24870560 - HERVH LTR ERV1 -4423 3290 3140 * 15947 102 24 25 chr2 228386017 228389129 -24867454 - HERVH LTR ERV1 -4726 2987 1 1579 166 93 49 chr2 228389131 228389560 -24867023 - LTR7 LTR ERV1 -2 448 1 391 224 12 0 chr2 228389613 228389698 -24866885 + MER45C DNA AcHobo 722 807 -146 5065 95 13 1 chr2 228390354 228391037 -24865546 - LTR8 LTR ERV1 0 691 1 189 74 0 0 chr2 228391769 228391796 -24864787 + (CA)n Simple_repeat Simple_repeat 2 28 0 2030 151 3 0 chr2 228391875 228392166 -24864417 + AluJb SINE Alu 1 292 -20 30 0 0 24 chr2 228392166 228392195 -24864388 + AT_rich Low_complexity Low_complexity 1 30 -10 2345 111 0 3 chr2 228392195 228392502 -24864081 + AluSg SINE Alu 1 306 -4 30 0 0 24 chr2 228392502 228392513 -24864070 + AT_rich Low_complexity Low_complexity 30 40 0 241 217 33 0 chr2 228392513 228392573 -24864010 + MER45C DNA AcHobo 892 953 0 872 271 66 25 chr2 228392649 228392966 -24863617 + L2 LINE L2 2400 2729 -585 1769 201 157 91 chr2 228393115 228393810 -24862773 - LTR1B LTR ERV1 -85 741 1 1749 205 30 10 chr2 228393865 228394269 -24862314 + L1MD3 LINE L1 7418 7829 -166 303 250 14 0 chr2 228394288 228394360 -24862223 - Tigger5 DNA MER2_type 0 2323 2251 770 165 0 8 chr2 228394431 228394558 -24862025 + FLAM_C SINE Alu 2 127 -6 506 231 0 0 chr2 228394652 228394756 -24861827 - U13 snRNA snRNA 0 104 1 254 230 27 0 chr2 228394760 228394834 -24861749 - L1M4 LINE L1 -2281 3865 3790 254 273 59 81 chr2 228394851 228394938 -24861645 + L2 LINE L2 2770 2857 -456 2482 152 37 22 chr2 228394938 228395398 -24861185 - MLT1C LTR MaLR 0 467 1 254 273 59 81 chr2 228395398 228395717 -24860866 + L2 LINE L2 2857 3172 -141 1263 206 0 5 chr2 228397086 228397300 -24859283 - AluJb SINE Alu -98 214 2 1008 225 53 4 chr2 228397821 228398065 -24858518 - L1MD2 LINE L1 -11 6348 6093 403 217 191 6 chr2 228398066 228398223 -24858360 - MER112 DNA MER1_type -72 188 3 454 177 212 35 chr2 228398455 228398568 -24858015 - FLAM_A SINE Alu 0 133 1 687 173 16 47 chr2 228398802 228398929 -24857654 + FLAM_C SINE Alu 2 124 -19 2400 69 17 0 chr2 228398936 228399227 -24857356 + AluSq SINE Alu 1 296 -17 1428 144 14 0 chr2 228399236 228399444 -24857139 + AluJb SINE Alu 86 296 -16 347 250 152 0 chr2 228399736 228399868 -24856715 + MIR SINE MIR 52 203 -59 2088 113 17 0 chr2 228400438 228400451 -24856132 - AluSx SINE Alu -14 298 287 342 0 0 0 chr2 228400451 228400489 -24856094 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 2088 113 17 0 chr2 228400489 228400768 -24855815 - AluSx SINE Alu -25 287 1 2044 113 50 0 chr2 228400826 228401109 -24855474 - AluSx SINE Alu -15 297 1 1274 176 8 5 chr2 228401113 228401363 -24855220 - AluJb SINE Alu -7 305 19 189 273 10 71 chr2 228402261 228402360 -24854223 - L3b LINE CR1 -187 1396 1304 457 256 133 41 chr2 228402645 228402840 -24853743 - MIR SINE MIR -35 227 15 295 257 71 43 chr2 228402894 228403034 -24853549 - MIR SINE MIR -35 227 84 410 228 289 6 chr2 228404893 228405073 -24851510 - MER102a DNA MER1_type -33 297 67 241 264 42 0 chr2 228409854 228409926 -24846657 + L2 LINE L2 3191 3265 -7 2367 88 0 0 chr2 228410471 228410777 -24845806 - AluSg SINE Alu -3 307 2 2117 116 0 10 chr2 228410851 228411153 -24845430 - AluSx SINE Alu -13 299 1 2282 96 0 0 chr2 228411206 228411508 -24845075 - AluSg SINE Alu -8 302 1 1058 82 0 0 chr2 228411509 228411644 -24844939 - AluSq/x SINE Alu -177 135 1 619 271 54 0 chr2 228413388 228413554 -24843029 + MIR3 SINE MIR 17 191 -17 226 196 87 0 chr2 228414548 228414594 -24841989 - MIR SINE MIR -96 166 117 287 292 134 29 chr2 228414805 228414976 -24841607 - L2 LINE L2 -469 2845 2657 1170 146 0 5 chr2 228415771 228415963 -24840620 - AluSg/x SINE Alu -1 309 119 2056 102 0 57 chr2 228415977 228416309 -24840274 - AluSq SINE Alu 0 313 1 208 346 87 24 chr2 228418185 228418312 -24838271 - L2 LINE L2 -2 3270 3136 381 315 25 25 chr2 228420685 228420847 -24835736 + MIR SINE MIR 34 195 -67 2197 93 33 3 chr2 228423312 228423614 -24832969 - AluSq SINE Alu -2 311 1 2282 92 0 10 chr2 228423634 228423948 -24832635 - AluSx SINE Alu -1 311 1 318 248 162 9 chr2 228423949 228424054 -24832529 + MARNA DNA Mariner 237 357 -229 282 302 48 43 chr2 228425713 228425886 -24830697 - MIR3 SINE MIR -24 184 3 217 206 85 128 chr2 228426229 228426370 -24830213 + L3b LINE CR1 1195 1329 -254 2101 128 3 0 chr2 228426396 228426694 -24829889 + AluSg SINE Alu 1 299 -11 228 273 23 34 chr2 228426763 228426851 -24829732 + MIR3 SINE MIR 119 205 -3 456 254 17 104 chr2 228427210 228427320 -24829263 + MIR SINE MIR 102 193 -69 2127 120 3 0 chr2 228427320 228427621 -24828962 + AluSx SINE Alu 1 302 -10 456 254 17 104 chr2 228427621 228427683 -24828900 + MIR SINE MIR 193 259 -3 * 601 269 44 16 chr2 228427679 228427861 -24828722 - MIR SINE MIR -64 198 12 856 110 47 0 chr2 228428721 228428848 -24827735 - AluSq/x SINE Alu -180 133 1 227 221 221 0 chr2 228429682 228429750 -24826833 - MIR3 SINE MIR -14 194 112 1906 119 0 14 chr2 228429939 228430233 -24826350 + AluSc SINE Alu 1 290 -19 2328 79 0 3 chr2 228430658 228430962 -24825621 + AluY SINE Alu 1 303 -8 1081 155 42 0 chr2 228431032 228431225 -24825358 + MER46A DNA MER2_type 1 201 -35 327 324 61 47 chr2 228431371 228431568 -24825015 - MIR SINE MIR -50 212 16 218 270 170 20 chr2 228431751 228431851 -24824732 + MIR SINE MIR 30 144 -64 2176 77 49 0 chr2 228431871 228432158 -24824425 + AluSx SINE Alu 1 301 -11 487 172 121 9 chr2 228432690 228432806 -24823777 - MER103 DNA DNA -20 146 18 232 250 0 0 chr2 228433305 228433357 -24823226 - L3 LINE CR1 -2 1575 1524 189 227 30 45 chr2 228433442 228433508 -24823075 - L3 LINE CR1 -235 1342 1278 21 95 0 0 chr2 228435059 228435122 -24821461 + GC_rich Low_complexity Low_complexity 1 63 0 318 298 91 12 chr2 228435323 228435565 -24821018 - L1ME4a LINE L1 -171 5950 5690 757 168 7 21 chr2 228435808 228435951 -24820632 + AluJo SINE Alu 3 143 -169 1694 151 48 3 chr2 228436088 228436258 -24820325 - AluSx SINE Alu -7 305 115 250 24 0 49 chr2 228436258 228436299 -24820284 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1694 151 48 3 chr2 228436299 228436420 -24820163 - AluSx SINE Alu -197 115 1 198 0 0 0 chr2 228436435 228436457 -24820126 + (A)n Simple_repeat Simple_repeat 1 22 0 1697 197 24 51 chr2 228436788 228437006 -24819577 - MLT1A1 LTR MaLR 0 365 160 1646 172 54 0 chr2 228437006 228437285 -24819298 - AluJb SINE Alu -18 294 1 1697 197 24 51 chr2 228437285 228437441 -24819142 - MLT1A1 LTR MaLR -205 160 1 287 265 65 132 chr2 228437742 228438082 -24818501 - L2 LINE L2 -6 3266 2950 632 179 41 87 chr2 228438287 228438352 -24818231 + MER53 DNA DNA 1 67 -122 1921 139 0 10 chr2 228438352 228438655 -24817928 - AluJb SINE Alu -12 300 1 632 179 41 87 chr2 228438655 228438785 -24817798 + MER53 DNA DNA 67 187 -2 2077 131 3 0 chr2 228439174 228439480 -24817103 - AluSx SINE Alu 0 312 6 2092 112 6 10 chr2 228439909 228440222 -24816361 + AluSx SINE Alu 1 312 0 2253 79 3 0 chr2 228440241 228440532 -24816051 + AluY SINE Alu 17 308 -3 218 298 106 57 chr2 228440730 228440871 -24815712 + MER5B DNA MER1_type 2 149 -29 460 260 96 28 chr2 228440889 228441066 -24815517 + MIR SINE MIR 31 219 -43 1225 237 232 15 chr2 228441448 228441611 -24814972 + L2 LINE L2 800 926 -2388 2049 95 0 37 chr2 228441611 228441949 -24814634 - AluSq SINE Alu 0 327 1 1802 148 7 13 chr2 228441951 228442119 -24814464 - AluJo SINE Alu -9 303 136 2355 71 3 10 chr2 228442119 228442428 -24814155 - AluSp SINE Alu -6 307 1 1802 148 7 13 chr2 228442428 228442564 -24814019 - AluJo SINE Alu -176 136 1 1225 237 232 15 chr2 228442564 228442931 -24813652 + L2 LINE L2 926 1450 -1864 221 288 0 0 chr2 228442951 228443010 -24813573 - MER5A DNA MER1_type -3 186 128 2280 100 3 0 chr2 228443041 228443352 -24813231 - AluSx SINE Alu 0 312 1 470 192 242 0 chr2 228443359 228443557 -24813026 - MER3 DNA MER1_type 0 2456 2211 524 27 14 0 chr2 228443567 228443640 -24812943 - MER41A LTR ERV1 -81 473 400 649 169 24 0 chr2 228443649 228443773 -24812810 - MER3 DNA MER1_type -87 122 43 1400 180 26 22 chr2 228444013 228444324 -24812259 + AluJo SINE Alu 1 312 0 492 301 57 103 chr2 228444356 228444575 -24812008 - L2 LINE L2 -4 3268 3041 2136 97 3 0 chr2 228444575 228444874 -24811709 + AluY SINE Alu 1 300 -11 492 301 57 103 chr2 228444874 228445181 -24811402 - L2 LINE L2 -231 3041 2764 844 125 0 8 chr2 228445184 228445312 -24811271 - MER4E LTR ERV1 0 766 640 449 141 90 0 chr2 228445350 228445428 -24811155 - MER4D LTR ERV1 -237 666 582 1789 121 7 30 chr2 228445429 228445754 -24810829 - AluSx SINE Alu 0 312 1 583 49 29 69 chr2 228445754 228445856 -24810727 - MER4B LTR ERV1 -512 98 1 306 321 30 42 chr2 228445858 228446023 -24810560 - L2 LINE L2 -559 2755 2593 2351 83 3 0 chr2 228446079 228446381 -24810202 - AluSg1 SINE Alu -6 303 1 406 282 122 17 chr2 228446406 228446660 -24809923 + LTR33 LTR ERVL 6 232 -289 2136 89 34 0 chr2 228446660 228446951 -24809632 - AluSq SINE Alu -12 301 1 406 282 122 17 chr2 228446951 228447140 -24809443 + LTR33 LTR ERVL 232 514 -7 2205 96 7 0 chr2 228447300 228447601 -24808982 + AluSx SINE Alu 1 303 -9 204 289 44 61 chr2 228447729 228447843 -24808740 - L2 LINE L2 -12 3260 3149 1531 176 13 33 chr2 228447864 228448165 -24808418 - AluJo SINE Alu -17 295 1 244 401 85 0 chr2 228448949 228449161 -24807422 - MIR SINE MIR 0 262 33 1065 154 0 5 chr2 228449386 228449574 -24807009 - Tigger5 DNA MER2_type 0 2323 2137 3313 139 33 17 chr2 228449675 228450193 -24806390 - MER1A DNA MER1_type 0 527 2 25 0 0 0 chr2 228450547 228450572 -24806011 + AT_rich Low_complexity Low_complexity 1 25 0 476 305 117 24 chr2 228450572 228450696 -24805887 - L1ME4a LINE L1 -11 6110 5999 1933 131 13 13 chr2 228450696 228450994 -24805589 - AluSg SINE Alu -12 298 1 476 305 117 24 chr2 228450994 228451082 -24805501 - L1ME4a LINE L1 -122 5999 5878 2073 106 13 3 chr2 228451090 228451392 -24805191 - AluSx SINE Alu -7 305 1 281 132 0 19 chr2 228451400 228451453 -24805130 + (TTTC)n Simple_repeat Simple_repeat 4 55 0 332 253 16 0 chr2 228451463 228451556 -24805027 - AluJb SINE Alu -51 251 179 * 335 124 29 39 chr2 228451528 228451605 -24804978 + AluSg SINE Alu 58 132 -168 627 190 0 0 chr2 228451606 228451706 -24804877 - AluJb SINE Alu -111 201 102 1576 108 13 9 chr2 228451722 228451954 -24804629 + AluSg/x SINE Alu 80 312 0 643 142 94 0 chr2 228451969 228452075 -24804508 - AluSq/x SINE Alu -195 117 2 572 205 184 75 chr2 228452110 228452158 -24804425 - MLT1L LTR MaLR -1 614 573 2133 98 7 10 chr2 228452158 228452464 -24804119 + AluSx SINE Alu 1 305 -7 572 205 184 75 chr2 228452464 228452654 -24803929 - MLT1L LTR MaLR -42 573 350 2286 97 0 3 chr2 228452718 228453029 -24803554 - AluSg SINE Alu 0 310 1 1391 161 154 3 chr2 228453030 228453092 -24803491 + MER7A DNA MER2_type 13 64 -2974 2194 98 0 7 chr2 228453092 228453397 -24803186 - AluSx SINE Alu -5 307 5 1391 161 154 3 chr2 228453397 228453626 -24802957 + MER7A DNA MER2_type 64 346 0 457 292 31 42 chr2 228453690 228453769 -24802814 + MIR SINE MIR 73 151 -111 3785 190 40 55 chr2 228453769 228454738 -24801845 - LTR5 LTR ERVK -14 955 1 457 292 31 42 chr2 228454738 228454850 -24801733 + MIR SINE MIR 151 262 0 381 229 166 68 chr2 228454856 228455061 -24801522 - MLT1L LTR MaLR -390 225 1 1949 152 0 0 chr2 228455098 228455400 -24801183 + AluSx SINE Alu 1 302 -10 502 193 46 107 chr2 228455445 228455617 -24800966 - L1MD3 LINE L1 0 7995 7845 2038 113 7 23 chr2 228455617 228455918 -24800665 - AluSx SINE Alu -16 296 1 502 193 46 107 chr2 228455918 228456025 -24800558 - L1MD3 LINE L1 -150 7845 7733 416 319 87 19 chr2 228456078 228456401 -24800182 - L1ME LINE L1 -363 5758 5414 2235 81 0 46 chr2 228456403 228456726 -24799857 - AluSp SINE Alu -1 312 5 1800 130 14 4 chr2 228456730 228457006 -24799577 - AluJo SINE Alu -9 303 25 255 114 0 0 chr2 228457155 228457190 -24799393 + U2 snRNA snRNA 1 35 -153 1842 139 10 3 chr2 228457200 228457494 -24799089 - AluSx SINE Alu -13 299 4 1008 89 36 0 chr2 228457502 228457670 -24798913 + CT-rich Low_complexity Low_complexity 3 180 0 1981 71 7 58 chr2 228457670 228457964 -24798619 - AluSc SINE Alu -30 279 1 353 274 63 79 chr2 228458136 228458326 -24798257 - L1ME LINE L1 -1050 5096 4910 304 244 106 2 chr2 228458367 228458478 -24798105 - MLT1G1 LTR MaLR -13 582 406 261 264 91 27 chr2 228458563 228458673 -24797910 - MLT1H LTR MaLR -432 117 1 2317 99 0 3 chr2 228458765 228459078 -24797505 - AluSx SINE Alu 0 312 1 228 286 148 35 chr2 228459542 228459745 -24796838 - L2 LINE L2 -2395 919 694 * 473 299 15 0 chr2 228459734 228459868 -24796715 + MER5A DNA MER1_type 54 189 0 264 167 0 0 chr2 228460493 228460541 -24796042 + (CAT)n Simple_repeat Simple_repeat 3 50 0 656 309 102 4 chr2 228461129 228461394 -24795189 - L2 LINE L2 0 3313 3023 2305 103 0 0 chr2 228461450 228461760 -24794823 - AluSg SINE Alu 0 310 1 1008 153 47 60 chr2 228461816 228461873 -24794710 - MER20 DNA MER1_type -7 212 156 2227 120 0 0 chr2 228461873 228462181 -24794402 - AluSg SINE Alu -2 308 1 1008 153 47 60 chr2 228462181 228462338 -24794245 - MER20 DNA MER1_type -63 156 1 225 195 0 0 chr2 228462345 228462386 -24794197 - L1ME3 LINE L1 -85 6077 6037 384 291 127 16 chr2 228462388 228462636 -24793947 - L2 LINE L2 -234 3038 2771 235 368 11 11 chr2 228462634 228462729 -24793854 - L2 LINE L2 -9 3263 3169 * 1437 71 0 0 chr2 228462745 228462928 -24793655 - L1MA5 LINE L1 -3 6297 6115 940 133 0 33 chr2 228462939 228463090 -24793493 + FRAM SINE Alu 11 156 -20 240 354 128 20 chr2 228463151 228463346 -24793237 - L2 LINE L2 -211 3061 2846 2133 87 10 7 chr2 228464131 228464431 -24792152 - AluSc SINE Alu -8 301 1 2122 80 48 0 chr2 228464440 228464729 -24791854 - AluSp SINE Alu -10 303 1 454 295 87 75 chr2 228465021 228465367 -24791216 + L2 LINE L2 2964 3313 0 26 0 0 0 chr2 228465699 228465725 -24790858 + GC_rich Low_complexity Low_complexity 1 26 0 2336 89 0 3 chr2 228467160 228467473 -24789110 + AluSx SINE Alu 1 312 0 222 37 0 0 chr2 228467500 228467527 -24789056 + (T)n Simple_repeat Simple_repeat 1 27 0 549 87 0 0 chr2 228467627 228467696 -24788887 - Alu SINE Alu -15 297 229 839 114 0 0 chr2 228467701 228467815 -24788768 - AluSg SINE Alu -196 114 1 2151 114 0 10 chr2 228467815 228468122 -24788461 - AluSg SINE Alu -6 304 1 728 304 67 8 chr2 228469001 228469241 -24787342 + MIR SINE MIR 1 254 -8 318 198 50 74 chr2 228470359 228470480 -24786103 + L2 LINE L2 2469 2586 -728 830 124 0 0 chr2 228470480 228470601 -24785982 + AluSp/q SINE Alu 185 305 -8 394 269 83 47 chr2 228470606 228470799 -24785784 + L2 LINE L2 2705 2904 -410 841 238 107 17 chr2 228470898 228471196 -24785387 + L2 LINE L2 2982 3306 -7 424 263 30 0 chr2 228471196 228471295 -24785288 + U13 snRNA snRNA 1 102 -2 210 143 0 0 chr2 228471315 228471350 -24785233 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 181 417 9 9 chr2 228471350 228471458 -24785125 + L2 LINE L2 3010 3117 -155 2002 138 0 3 chr2 228471542 228471847 -24784736 + AluSx SINE Alu 1 304 -8 205 306 21 111 chr2 228473299 228473443 -24783140 - MER5A DNA MER1_type -58 131 1 2082 84 30 14 chr2 228473748 228474045 -24782538 + AluSq SINE Alu 1 302 -11 2164 117 10 0 chr2 228474074 228474383 -24782200 - AluSx SINE Alu 0 312 1 398 387 5 5 chr2 228474404 228474603 -24781980 - L1ME2 LINE L1 -252 5912 5714 304 319 148 35 chr2 228475459 228475885 -24780698 + L2 LINE L2 2804 3277 -36 512 298 42 46 chr2 228476090 228476328 -24780255 - MIR SINE MIR -6 256 20 24 0 0 0 chr2 228476412 228476436 -24780147 + AT_rich Low_complexity Low_complexity 1 24 0 2055 121 0 0 chr2 228476448 228476746 -24779837 + AluSx SINE Alu 1 298 -14 1051 209 127 13 chr2 228476749 228477056 -24779527 - L1MD3 LINE L1 -10 7985 7644 948 124 32 83 chr2 228477057 228477274 -24779309 + AluJo SINE Alu 87 292 -20 1081 161 99 5 chr2 228477278 228477501 -24779082 - L1MC4a LINE L1 -404 7404 7161 903 216 10 25 chr2 228477567 228477766 -24778817 + AluJo SINE Alu 87 282 -30 252 77 0 0 chr2 228477772 228477811 -24778772 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 2211 92 3 0 chr2 228477815 228478108 -24778475 + AluSp SINE Alu 1 294 -19 307 261 189 0 chr2 228478119 228478230 -24778353 + L2 LINE L2 3138 3269 -3 2280 92 0 0 chr2 228478550 228478844 -24777739 + AluSc SINE Alu 1 294 -15 3179 201 130 0 chr2 228478978 228479235 -24777348 - MER45B DNA AcHobo -622 959 737 1731 161 4 0 chr2 228479235 228479514 -24777069 - AluJo SINE Alu -32 280 1 2234 105 0 10 chr2 228479519 228479833 -24776750 - AluSq SINE Alu -2 311 1 1874 101 119 0 chr2 228479838 228480106 -24776477 - AluSg SINE Alu 0 300 1 3179 201 130 0 chr2 228480106 228480599 -24775984 - MER45B DNA AcHobo -850 731 98 2232 103 0 0 chr2 228480600 228480902 -24775681 + AluSc SINE Alu 1 302 -7 2317 93 0 0 chr2 228480912 228481213 -24775370 + AluSx SINE Alu 1 301 -11 862 132 0 0 chr2 228481222 228481343 -24775240 + AluJo/FLAM SINE Alu 5 125 -187 1360 93 0 0 chr2 228481345 228481517 -24775066 - AluSq SINE Alu -141 172 1 1870 115 23 33 chr2 228481525 228481829 -24774754 - AluJb SINE Alu -11 301 1 222 214 0 0 chr2 228481831 228481873 -24774710 + MER5A DNA MER1_type 148 189 0 220 318 221 22 chr2 228481873 228481996 -24774587 + L2 LINE L2 2948 3045 -227 1675 114 126 0 chr2 228481996 228482259 -24774324 - AluSx SINE Alu -16 296 1 220 318 221 22 chr2 228482259 228482399 -24774184 + L2 LINE L2 3045 3264 -8 218 297 0 11 chr2 228483171 228483262 -24773321 + CT-rich Low_complexity Low_complexity 2 91 0 222 177 16 32 chr2 228483314 228483376 -24773207 + CT-rich Low_complexity Low_complexity 1 61 0 346 197 141 0 chr2 228483871 228483942 -24772641 + FLAM_A SINE Alu 45 125 -8 272 303 41 28 chr2 228484025 228484170 -24772413 - L2 LINE L2 -234 3038 2892 589 122 22 0 chr2 228485050 228485140 -24771443 + FLAM_C SINE Alu 34 125 -18 23 0 0 29 chr2 228485140 228485151 -24771432 + AT_rich Low_complexity Low_complexity 1 11 -22 2237 101 0 0 chr2 228485151 228485449 -24771134 + AluSx SINE Alu 1 298 -14 23 0 0 29 chr2 228485449 228485471 -24771112 + AT_rich Low_complexity Low_complexity 11 33 0 608 132 12 2 chr2 228485471 228485714 -24770869 + AluJ SINE Alu 1 296 -16 198 0 0 0 chr2 228486738 228486760 -24769823 + (TTCA)n Simple_repeat Simple_repeat 4 25 0 340 335 101 5 chr2 228486767 228486976 -24769607 - MIR SINE MIR -14 248 20 921 288 27 69 chr2 228489028 228489516 -24767067 + L2 LINE L2 2801 3270 -2 2147 105 0 3 chr2 228489668 228489963 -24766620 + AluSg SINE Alu 1 294 -16 422 277 19 7 chr2 228490188 228490343 -24766240 - MER113 DNA MER1_type? -221 300 144 2080 111 3 0 chr2 228490343 228490641 -24765942 + AluSg SINE Alu 1 299 -11 2312 79 0 0 chr2 228490668 228490997 -24765586 - L1P4 LINE L1 -485 5683 5355 207 0 0 0 chr2 228490997 228491020 -24765563 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5456 59 19 10 chr2 228491020 228491745 -24764838 - SVA Other Other -17 1369 638 2111 101 3 10 chr2 228491747 228492045 -24764538 - AluSc SINE Alu -10 299 4 2395 77 0 3 chr2 228492049 228492361 -24764222 - AluY SINE Alu 0 311 1 8081 122 13 52 chr2 228492391 228492875 -24763708 - HUERS-P3b LTR ERV1 -4 7414 6912 2066 112 0 7 chr2 228492875 228493170 -24763413 + AluY SINE Alu 1 293 -18 8081 122 13 52 chr2 228493170 228493424 -24763159 - HUERS-P3b LTR ERV1 -506 6912 6650 2126 102 0 7 chr2 228493424 228493717 -24762866 + AluSp SINE Alu 1 291 -22 8081 122 13 52 chr2 228493717 228494098 -24762485 - HUERS-P3b LTR ERV1 -768 6650 6357 3098 122 139 13 chr2 228494098 228494140 -24762443 - LTR10A LTR ERV1 -2 607 572 2339 93 0 0 chr2 228494140 228494450 -24762133 + AluY SINE Alu 1 310 -1 3098 122 139 13 chr2 228494450 228494946 -24761637 - LTR10A LTR ERV1 -37 572 1 8081 122 13 52 chr2 228494946 228495220 -24761363 - HUERS-P3b LTR ERV1 -1061 6357 6074 3949 151 3 0 chr2 228495220 228495910 -24760673 - L1P LINE L1 -1349 4797 4106 2261 64 7 10 chr2 228495937 228496235 -24760348 + AluY SINE Alu 1 297 -14 717 162 51 0 chr2 228496306 228496423 -24760160 - FLAM_C SINE Alu -10 123 1 4200 193 31 45 chr2 228497306 228498272 -24758311 + LTR13 LTR ERVK 1 952 -2 1698 129 16 0 chr2 228498272 228498528 -24758055 + AluSx SINE Alu 53 312 0 1259 97 11 0 chr2 228498543 228498718 -24757865 + AluSc SINE Alu 118 294 -15 1135 109 6 6 chr2 228498907 228499072 -24757511 - AluSx SINE Alu -147 165 1 2170 94 0 13 chr2 228499133 228499431 -24757152 + AluSg SINE Alu 1 294 -16 279 0 0 0 chr2 228499992 228500023 -24756560 + (TC)n Simple_repeat Simple_repeat 2 32 0 2100 98 30 3 chr2 228501019 228501314 -24755269 + AluSx SINE Alu 1 303 -9 1746 151 15 52 chr2 228501322 228501646 -24754937 + AluJb SINE Alu 1 312 0 1048 76 0 0 chr2 228501655 228501787 -24754796 + AluSp SINE Alu 1 132 -181 2179 101 0 16 chr2 228501789 228502097 -24754486 + AluSg SINE Alu 1 303 -7 2071 123 3 19 chr2 228502541 228502858 -24753725 - AluSx SINE Alu 0 312 1 2047 84 7 24 chr2 228502862 228503182 -24753401 - AluSg SINE Alu 0 315 1 1346 94 0 35 chr2 228503429 228503559 -24753024 - MER4A LTR ERV1 0 664 542 2256 89 3 3 chr2 228503559 228503863 -24752720 - AluSp SINE Alu -9 304 1 1346 94 0 35 chr2 228503863 228503934 -24752649 - MER4A LTR ERV1 -122 542 470 1420 67 0 0 chr2 228503942 228504121 -24752462 + AluY SINE Alu 118 296 -15 1173 114 31 70 chr2 228504121 228504552 -24752031 - MER4A LTR ERV1 -182 482 1 837 120 15 15 chr2 228504626 228504759 -24751824 + FLAM_C SINE Alu 1 133 0 2143 97 10 7 chr2 228504804 228505103 -24751480 + AluSx SINE Alu 1 300 -12 1853 105 29 4 chr2 228505103 228505380 -24751203 + AluSq SINE Alu 14 297 -16 2398 61 0 19 chr2 228505931 228506244 -24750339 + AluY SINE Alu 1 307 -4 2133 109 0 19 chr2 228506253 228506566 -24750017 + AluSx SINE Alu 1 307 -5 2401 75 7 0 chr2 228507865 228508171 -24748412 + AluY SINE Alu 1 308 -3 768 164 0 0 chr2 228508350 228508472 -24748111 - AluJo SINE Alu -69 243 122 1955 167 3 0 chr2 228508536 228508836 -24747747 - AluSx SINE Alu 0 312 12 2122 127 7 3 chr2 228508863 228509157 -24747426 - AluSx SINE Alu -19 293 1 1289 187 33 66 chr2 228509357 228509689 -24746894 - MLT1A2 LTR MaLR -6 368 48 337 293 138 0 chr2 228510938 228511054 -24745529 - MIR SINE MIR -109 153 22 2436 72 13 0 chr2 228511054 228511360 -24745223 + AluSg SINE Alu 1 310 0 193 222 32 63 chr2 228511894 228511957 -24744626 - L2 LINE L2 -208 3064 3004 271 306 75 7 chr2 228511989 228512136 -24744447 - L1ME4a LINE L1 -8 6113 5957 1576 191 17 17 chr2 228512219 228512518 -24744065 - AluJb SINE Alu -13 299 1 743 167 8 0 chr2 228512528 228512660 -24743923 - FLAM_C SINE Alu 0 133 1 415 231 88 34 chr2 228512664 228512811 -24743772 - L1ME4a LINE L1 -393 5728 5574 218 291 12 23 chr2 228512836 228512922 -24743661 - L2 LINE L2 -296 2976 2892 535 211 137 32 chr2 228512961 228513151 -24743432 - L2 LINE L2 -252 3061 2852 1902 160 3 13 chr2 228513536 228513842 -24742741 + AluJo SINE Alu 1 303 -9 1356 200 19 57 chr2 228514133 228514255 -24742328 + AluJo SINE Alu 3 128 -184 2129 131 0 0 chr2 228514255 228514545 -24742038 - AluSx SINE Alu -18 294 5 1356 200 19 57 chr2 228514545 228514737 -24741846 + AluJo SINE Alu 128 305 -7 675 227 116 0 chr2 228514775 228514947 -24741636 - MIR SINE MIR -67 195 4 2342 78 3 0 chr2 228515072 228515378 -24741205 - AluSp SINE Alu 0 307 1 581 251 37 12 chr2 228515463 228515626 -24740957 - L2 LINE L2 -191 3081 2915 2526 67 0 3 chr2 228515876 228516175 -24740408 + AluY SINE Alu 1 298 -13 2234 84 30 14 chr2 228516182 228516479 -24740104 + AluSg SINE Alu 1 302 -8 1616 114 0 87 chr2 228516683 228516930 -24739653 - Tigger3(Golem) DNA MER2_type -2 3036 2818 2513 87 0 0 chr2 228516930 228517240 -24739343 + AluY SINE Alu 1 310 -1 1616 114 0 87 chr2 228517240 228517290 -24739293 - Tigger3(Golem) DNA MER2_type -220 2818 2765 1870 92 0 0 chr2 228517293 228517522 -24739061 + AluSg SINE Alu 1 229 -81 401 111 0 0 chr2 228517522 228517576 -24739007 - Alu SINE Alu -249 54 1 1844 172 7 10 chr2 228517623 228517926 -24738657 - AluJb SINE Alu -10 302 1 451 94 0 0 chr2 228517926 228517990 -24738593 - L1MC/D LINE L1 -548 5694 5631 * 2537 146 14 85 chr2 228517983 228518209 -24738374 - L1MC/D LINE L1 -435 5807 5567 1745 204 0 6 chr2 228518209 228518522 -24738061 + AluJo SINE Alu 1 311 -1 2432 84 3 13 chr2 228518531 228518842 -24737741 + AluSx SINE Alu 5 312 0 2537 146 14 85 chr2 228518842 228519127 -24737456 - L1MC/D LINE L1 -683 5559 5255 2194 117 3 3 chr2 228519127 228519434 -24737149 - AluSg SINE Alu -3 307 1 2331 110 0 3 chr2 228519440 228519748 -24736835 - AluSg SINE Alu -3 307 1 2537 146 14 85 chr2 228519748 228519768 -24736815 - L1MC/D LINE L1 -992 5250 5230 2402 93 13 0 chr2 228519768 228520068 -24736515 - AluSx SINE Alu -8 304 1 2537 146 14 85 chr2 228520068 228520202 -24736381 - L1MC/D LINE L1 -1012 5230 5163 613 98 10 0 chr2 228520203 228520305 -24736278 - AluSp SINE Alu -3 310 208 1150 53 0 0 chr2 228520305 228520436 -24736147 - AluSp SINE Alu -182 131 1 576 239 40 6 chr2 228520443 228520619 -24735964 - L1MC/D LINE L1 -982 5164 4983 1691 120 132 0 chr2 228521163 228521421 -24735162 + AluJo SINE Alu 1 292 -20 1763 249 96 14 chr2 228521515 228522026 -24734557 - MER21B LTR ERV1 -57 806 254 849 178 15 91 chr2 228522057 228522254 -24734329 + AluJo SINE Alu 23 204 -108 1121 127 19 6 chr2 228522254 228522412 -24734171 - AluJo SINE Alu -144 168 9 2103 106 6 34 chr2 228522452 228522792 -24733791 - AluSx SINE Alu 0 331 1 1253 151 8 92 chr2 228522923 228523099 -24733484 - AluJb SINE Alu -11 301 151 2509 53 0 23 chr2 228523099 228523260 -24733323 - AluY SINE Alu -18 293 141 191 36 36 0 chr2 228523260 228523288 -24733295 + (TTTG)n Simple_repeat Simple_repeat 3 31 0 2509 53 0 23 chr2 228523288 228523426 -24733157 - AluY SINE Alu -170 141 1 1253 151 8 92 chr2 228523426 228523500 -24733083 - AluJb SINE Alu -161 151 72 449 267 0 0 chr2 228523514 228523615 -24732968 + AluJo SINE Alu 124 224 -88 1090 88 0 22 chr2 228523616 228523753 -24732830 + AluSq/x SINE Alu 2 135 -178 1620 98 0 5 chr2 228523753 228523956 -24732627 + AluSg SINE Alu 1 202 -108 362 299 22 8 chr2 228524058 228524192 -24732391 + LTR16A1 LTR ERVL 320 455 -2 2434 100 0 0 chr2 228525145 228525454 -24731129 + AluSx SINE Alu 1 309 -3 2256 98 33 13 chr2 228525456 228525761 -24730822 + AluY SINE Alu 1 311 0 506 191 23 8 chr2 228525901 228526021 -24730562 + L1MD3 LINE L1 7884 8042 0 2125 132 0 3 chr2 228526023 228526313 -24730270 + AluSx SINE Alu 1 290 -18 228 35 0 0 chr2 228526313 228526342 -24730241 + (CATA)n Simple_repeat Simple_repeat 2 30 0 1223 140 0 0 chr2 228526347 228526511 -24730072 + AluSg/x SINE Alu 133 296 -14 511 92 0 133 chr2 228526511 228526631 -24729952 + AluJo/FRAM SINE Alu 209 312 0 312 91 0 0 chr2 228526906 228526950 -24729633 + (TG)n Simple_repeat Simple_repeat 1 44 0 2290 108 0 0 chr2 228528489 228528784 -24727799 - AluSx SINE Alu -17 295 1 2089 97 50 0 chr2 228529589 228529890 -24726693 - AluSx SINE Alu 0 316 2 853 135 8 15 chr2 228529894 228530027 -24726556 - FLAM_C SINE Alu -11 132 1 2218 132 0 0 chr2 228530384 228530695 -24725888 - AluSx SINE Alu -1 311 1 2532 64 3 0 chr2 228531175 228531473 -24725110 + AluSp SINE Alu 1 299 -14 248 244 13 51 chr2 228531879 228531957 -24724626 - MIR SINE MIR -91 117 43 651 270 104 0 chr2 228532295 228532506 -24724077 + MIR SINE MIR 28 260 -2 2537 58 0 10 chr2 228533092 228533401 -24723182 + AluSc SINE Alu 1 306 -3 243 272 12 49 chr2 228533422 228533503 -24723080 - L2 LINE L2 -77 3236 3159 2242 87 0 32 chr2 228533516 228533828 -24722755 + AluSg SINE Alu 1 302 -8 1579 124 70 44 chr2 228533834 228534107 -24722476 + AluJb SINE Alu 1 280 -32 243 0 0 0 chr2 228534109 228534136 -24722447 + (TAA)n Simple_repeat Simple_repeat 2 28 0 208 258 40 73 chr2 228534206 228534294 -24722289 - L2 LINE L2 -333 2980 2898 1693 169 39 4 chr2 228534294 228534573 -24722010 + AluJo SINE Alu 10 298 -14 208 258 40 73 chr2 228534573 228534635 -24721948 - L2 LINE L2 -415 2898 2835 696 238 141 24 chr2 228535164 228535454 -24721129 - L2 LINE L2 -2 3311 2988 262 253 24 0 chr2 228535609 228535692 -24720891 + MIR SINE MIR 65 149 -59 345 246 36 128 chr2 228535794 228535904 -24720679 - Charlie8 DNA MER1_type -164 177 91 810 124 0 29 chr2 228535904 228536041 -24720542 + FLAM_C SINE Alu 1 133 0 345 246 36 128 chr2 228536041 228536125 -24720458 - Charlie8 DNA MER1_type -250 91 1 2374 100 6 0 chr2 228536613 228536924 -24719659 - AluSq SINE Alu 0 313 1 1027 113 0 0 chr2 228536924 228537057 -24719526 - AluSg SINE Alu -177 133 1 2378 78 23 3 chr2 228537058 228537365 -24719218 - AluSp SINE Alu 0 313 1 1724 133 96 4 chr2 228537366 228537637 -24718946 - AluJo SINE Alu -16 296 1 269 229 38 0 chr2 228537667 228537752 -24718831 - MIR SINE MIR -62 146 66 929 164 5 96 chr2 228538335 228538476 -24718107 - AluJb SINE Alu -37 275 157 2408 92 0 3 chr2 228538476 228538770 -24717813 - AluSq SINE Alu -11 302 10 929 164 5 96 chr2 228538770 228538836 -24717747 - AluJb SINE Alu -155 157 87 339 188 281 0 chr2 228538837 228538933 -24717650 - MIR SINE MIR -112 150 28 628 274 15 20 chr2 228539206 228539410 -24717173 - MIR SINE MIR -43 219 17 266 289 144 10 chr2 228540199 228540296 -24716287 + MIR SINE MIR 109 218 -44 207 100 0 0 chr2 228540450 228540480 -24716103 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1663 138 54 4 chr2 228540494 228540755 -24715828 - AluSx SINE Alu -38 274 1 244 325 41 41 chr2 228541810 228541933 -24714650 - L2 LINE L2 -23 3249 3127 286 228 76 11 chr2 228543218 228543310 -24713273 + MIR SINE MIR 47 144 -118 21 57 0 0 chr2 228543672 228543707 -24712876 + GC_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr2 228545023 228545051 -24711532 + GC_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr2 228545229 228545252 -24711331 + GC_rich Low_complexity Low_complexity 1 23 0 448 291 124 44 chr2 228545436 228545467 -24711116 - L1ME LINE L1 -460 5661 5634 2300 61 9 73 chr2 228545467 228545796 -24710787 + AluY SINE Alu 1 308 -3 448 291 124 44 chr2 228545796 228546039 -24710544 - L1ME LINE L1 -487 5634 5365 2063 121 35 0 chr2 228546287 228546576 -24710007 - AluSx SINE Alu -9 303 5 2347 117 0 0 chr2 228546645 228546953 -24709630 - AluSc SINE Alu -1 308 1 2168 124 7 3 chr2 228546955 228547261 -24709322 - AluSx SINE Alu -4 308 2 449 267 0 0 chr2 228547262 228547363 -24709220 - AluJo SINE Alu -88 224 124 1253 151 8 92 chr2 228547377 228547451 -24709132 + AluJb SINE Alu 72 151 -161 2366 63 3 33 chr2 228547451 228547591 -24708992 + AluY SINE Alu 1 144 -167 185 0 40 0 chr2 228547591 228547616 -24708967 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 2366 63 3 33 chr2 228547616 228547777 -24708806 + AluY SINE Alu 144 293 -18 1253 151 8 92 chr2 228547777 228547953 -24708630 + AluJb SINE Alu 151 301 -11 842 167 17 11 chr2 228548084 228548258 -24708325 + AluSx SINE Alu 1 175 -137 26 0 0 0 chr2 228548469 228548495 -24708088 + AT_rich Low_complexity Low_complexity 1 26 0 2050 118 3 14 chr2 228548568 228548865 -24707718 + AluSx SINE Alu 7 300 -12 215 214 229 0 chr2 228548884 228548954 -24707629 - L2 LINE L2 -1 3312 3227 1818 159 7 13 chr2 228549015 228549316 -24707267 + AluJb SINE Alu 1 299 -13 2299 115 6 3 chr2 228549463 228549775 -24706808 - AluSq SINE Alu 0 313 1 2276 108 14 0 chr2 228549780 228550077 -24706506 - AluSx SINE Alu -11 301 1 536 239 8 0 chr2 228550081 228550211 -24706372 - L1ME LINE L1 -853 5293 5163 613 98 10 0 chr2 228550212 228550314 -24706269 - AluSp SINE Alu -3 310 208 1150 53 0 0 chr2 228550314 228550445 -24706138 - AluSp SINE Alu -182 131 1 576 239 40 6 chr2 228550452 228550628 -24705955 - L1ME LINE L1 -982 5164 4983 1691 120 132 0 chr2 228551172 228551430 -24705153 + AluJo SINE Alu 1 292 -20 1711 249 98 14 chr2 228551524 228552033 -24704550 - MER21B LTR ERV1 -57 806 255 580 150 18 26 chr2 228552064 228552177 -24704406 + FLAM_C SINE Alu 23 134 -9 1790 119 0 0 chr2 228552278 228552521 -24704062 + AluSc SINE Alu 48 290 -19 2627 49 0 3 chr2 228552924 228553229 -24703354 + AluY SINE Alu 1 304 -7 1707 174 20 26 chr2 228553232 228553536 -24703047 + AluSx SINE Alu 1 302 -10 216 0 0 0 chr2 228554290 228554314 -24702269 + (T)n Simple_repeat Simple_repeat 1 24 0 933 157 0 0 chr2 228554496 228554630 -24701953 + AluJb SINE Alu 1 134 -178 2327 109 0 0 chr2 228555283 228555610 -24700973 - AluSx SINE Alu 0 312 1 842 165 0 8 chr2 228555644 228555771 -24700812 + FLAM_C SINE Alu 1 126 -17 1970 112 0 0 chr2 228555779 228556039 -24700544 - AluSx SINE Alu -18 294 35 246 156 0 0 chr2 228556311 228556356 -24700227 + T-rich Low_complexity Low_complexity 1 45 0 344 125 36 0 chr2 228556658 228556714 -24699869 - MER66A LTR ERV1 -140 338 281 248 260 13 52 chr2 228557509 228557586 -24698997 + L2 LINE L2 3189 3262 -10 1543 166 106 3 chr2 228557996 228558279 -24698304 + AluJo SINE Alu 1 312 0 335 333 30 15 chr2 228558474 228558609 -24697974 - MER5A DNA MER1_type -9 180 44 286 309 171 0 chr2 228558872 228558995 -24697588 - MIR3 SINE MIR 0 208 65 410 277 85 7 chr2 228559173 228559371 -24697212 + MIR SINE MIR 11 262 0 1876 65 19 11 chr2 228559524 228559785 -24696798 - AluY SINE Alu -4 307 45 2498 61 3 0 chr2 228559786 228560080 -24696503 - AluY SINE Alu -16 295 1 2019 114 0 17 chr2 228560619 228560908 -24695675 + AluJo SINE Alu 1 284 -28 222 263 91 30 chr2 228561331 228561430 -24695153 - MIR3 SINE MIR -5 203 99 2211 118 3 3 chr2 228561733 228562037 -24694546 - AluSx SINE Alu -8 304 1 2414 86 3 3 chr2 228562263 228562566 -24694017 - AluSx SINE Alu -9 303 1 1890 162 0 20 chr2 228562826 228563122 -24693461 - AluJb SINE Alu -22 290 1 1169 136 51 0 chr2 228563234 228563410 -24693173 - AluSg/x SINE Alu -11 301 117 2067 151 7 0 chr2 228563480 228563784 -24692799 + AluJb SINE Alu 1 306 -6 2071 136 10 7 chr2 228563785 228564080 -24692503 + AluSx SINE Alu 1 296 -16 2063 139 7 0 chr2 228564225 228564519 -24692064 + AluSx SINE Alu 1 296 -16 21 0 0 0 chr2 228566558 228566579 -24690004 + AT_rich Low_complexity Low_complexity 1 21 0 34 24 0 0 chr2 228567865 228567906 -24688677 + AT_rich Low_complexity Low_complexity 1 41 0 734 136 0 16 chr2 228568749 228568874 -24687709 - AluSg/x SINE Alu 0 309 187 237 33 0 0 chr2 228570114 228570144 -24686439 + (TG)n Simple_repeat Simple_repeat 2 31 0 2430 91 0 0 chr2 228571266 228571563 -24685020 + AluSg SINE Alu 1 297 -13 1933 132 3 43 chr2 228571667 228571992 -24684591 + AluJo SINE Alu 1 312 0 2263 104 0 13 chr2 228572188 228572486 -24684097 + AluSg SINE Alu 1 294 -16 279 0 0 0 chr2 228573047 228573078 -24683505 + (TC)n Simple_repeat Simple_repeat 2 32 0 2236 98 30 3 chr2 228574073 228574368 -24682215 + AluSx SINE Alu 1 303 -9 1869 151 15 52 chr2 228574376 228574700 -24681883 + AluJb SINE Alu 1 312 0 1000 92 15 0 chr2 228574709 228574839 -24681744 + AluSp SINE Alu 1 132 -181 2314 101 0 16 chr2 228574841 228575149 -24681434 + AluSg SINE Alu 1 303 -7 2211 123 3 19 chr2 228575592 228575909 -24680674 - AluSx SINE Alu 0 312 1 2133 83 7 31 chr2 228575913 228576235 -24680348 - AluSg SINE Alu 0 315 1 3325 93 23 93 chr2 228576482 228576613 -24679970 - MER4A LTR ERV1 0 600 461 2394 89 3 3 chr2 228576613 228576917 -24679666 - AluSp SINE Alu -9 304 1 3325 93 23 93 chr2 228576917 228576996 -24679587 - MER4A LTR ERV1 -139 461 378 1469 62 0 6 chr2 228576996 228577174 -24679409 + AluY SINE Alu 118 294 -17 3325 93 23 93 chr2 228577174 228577607 -24678976 - MER4A LTR ERV1 -222 378 1 780 120 15 15 chr2 228577681 228577814 -24678769 + FLAM_C SINE Alu 1 133 0 2280 97 10 7 chr2 228577859 228578158 -24678425 + AluSx SINE Alu 1 300 -12 1973 105 29 4 chr2 228578158 228578435 -24678148 + AluSq SINE Alu 14 297 -16 2541 61 0 19 chr2 228578984 228579297 -24677286 + AluY SINE Alu 1 307 -4 2272 109 0 19 chr2 228579306 228579619 -24676964 + AluSx SINE Alu 1 307 -5 2542 75 7 0 chr2 228580917 228581223 -24675360 + AluY SINE Alu 1 308 -3 717 164 0 0 chr2 228581402 228581524 -24675059 - AluJo SINE Alu -69 243 122 1955 167 3 0 chr2 228581588 228581888 -24674695 - AluSx SINE Alu 0 312 12 2122 127 7 3 chr2 228581917 228582209 -24674374 - AluSx SINE Alu -19 293 1 1289 187 33 66 chr2 228582409 228582741 -24673842 - MLT1A2 LTR MaLR -6 368 48 337 293 138 0 chr2 228583990 228584106 -24672477 - MIR SINE MIR -109 153 22 2436 72 13 0 chr2 228584106 228584412 -24672171 + AluSg SINE Alu 1 310 0 193 222 32 63 chr2 228584947 228585010 -24671573 - L2 LINE L2 -208 3064 3004 271 306 75 7 chr2 228585042 228585189 -24671394 - L1ME4a LINE L1 -8 6113 5957 1576 191 17 17 chr2 228585272 228585571 -24671012 - AluJb SINE Alu -13 299 1 743 167 8 0 chr2 228585581 228585713 -24670870 - FLAM_C SINE Alu 0 133 1 415 231 88 34 chr2 228585717 228585864 -24670719 - L1ME4a LINE L1 -393 5728 5574 218 291 12 23 chr2 228585889 228585975 -24670608 - L2 LINE L2 -296 2976 2892 535 211 137 32 chr2 228586014 228586204 -24670379 - L2 LINE L2 -252 3061 2852 1902 160 3 13 chr2 228586589 228586895 -24669688 + AluJo SINE Alu 1 303 -9 1356 200 19 57 chr2 228587186 228587308 -24669275 + AluJo SINE Alu 3 128 -184 2104 134 0 0 chr2 228587308 228587598 -24668985 - AluSx SINE Alu -18 294 5 1356 200 19 57 chr2 228587598 228587790 -24668793 + AluJo SINE Alu 128 305 -7 675 227 116 0 chr2 228587828 228588000 -24668583 - MIR SINE MIR -67 195 4 2342 78 3 0 chr2 228588125 228588431 -24668152 - AluSp SINE Alu 0 307 1 581 251 37 12 chr2 228588516 228588679 -24667904 - L2 LINE L2 -191 3081 2915 2526 67 0 3 chr2 228588929 228589228 -24667355 + AluY SINE Alu 1 298 -13 2199 84 30 17 chr2 228589235 228589533 -24667050 + AluSg SINE Alu 1 302 -8 1588 117 0 87 chr2 228589737 228589984 -24666599 - Tigger3(Golem) DNA MER2_type -2 3026 2808 2513 87 0 0 chr2 228589984 228590294 -24666289 + AluY SINE Alu 1 310 -1 1588 117 0 87 chr2 228590294 228590344 -24666239 - Tigger3(Golem) DNA MER2_type -220 2808 2755 1840 88 4 0 chr2 228590347 228590575 -24666008 + AluSg SINE Alu 1 229 -81 401 111 0 0 chr2 228590575 228590629 -24665954 - Alu SINE Alu -248 54 1 1824 168 7 13 chr2 228590676 228590980 -24665603 - AluJb SINE Alu -10 302 1 451 94 0 0 chr2 228590980 228591044 -24665539 - L1MC/D LINE L1 -548 5694 5631 * 1292 136 14 0 chr2 228591037 228591257 -24665326 - L1MC/D LINE L1 -435 5807 5585 1731 208 0 0 chr2 228591263 228591561 -24665022 + AluJo SINE Alu 1 298 -14 197 203 0 47 chr2 228593828 228593892 -24662691 - MIR SINE MIR -66 142 82 444 227 70 52 chr2 228595012 228595113 -24661470 - MER112 DNA MER1_type -11 249 142 1981 156 3 0 chr2 228595113 228595408 -24661175 + AluJb SINE Alu 1 296 -16 444 227 70 52 chr2 228595408 228595478 -24661105 - MER112 DNA MER1_type -118 142 75 255 140 53 18 chr2 228596722 228596779 -24659804 - L2 LINE L2 -1 3271 3213 25 65 0 0 chr2 228597774 228597820 -24658763 + GC_rich Low_complexity Low_complexity 1 46 0 255 309 119 67 chr2 228598602 228598812 -24657771 - L2 LINE L2 -10 3262 3042 1948 148 13 13 chr2 228598949 228599260 -24657323 - AluJo SINE Alu -1 311 1 2081 109 7 30 chr2 228599461 228599763 -24656820 + AluSx SINE Alu 1 295 -17 189 0 0 0 chr2 228599942 228599963 -24656620 + (CA)n Simple_repeat Simple_repeat 2 22 0 2065 118 17 17 chr2 228600052 228600348 -24656235 - AluSg SINE Alu -14 296 1 1022 48 8 0 chr2 228600374 228600500 -24656083 - AluY SINE Alu -14 297 171 334 237 3 0 chr2 228600500 228600588 -24655995 - AluJ/FLAM SINE Alu -238 64 1 539 265 85 14 chr2 228600588 228600811 -24655772 + L1MC4a LINE L1 5721 5959 -1849 2388 94 3 3 chr2 228600954 228601263 -24655320 - AluSq SINE Alu -4 309 1 2302 113 0 0 chr2 228601268 228601569 -24655014 - AluSx SINE Alu -11 301 1 344 250 174 30 chr2 228601831 228601963 -24654620 + MER5A DNA MER1_type 39 189 0 2311 100 7 3 chr2 228601994 228602295 -24654288 + AluSq SINE Alu 1 302 -11 2079 149 0 0 chr2 228602304 228602605 -24653978 + AluSx SINE Alu 1 301 -11 2373 87 13 0 chr2 228602764 228603064 -24653519 + AluSx SINE Alu 1 304 -8 451 233 72 2 chr2 228603079 228603217 -24653366 + MIR SINE MIR 4 141 -67 721 190 15 22 chr2 228603645 228603782 -24652801 + AluJb SINE Alu 158 293 -19 354 296 246 32 chr2 228603873 228604267 -24652316 + L2 LINE L2 2217 2526 -788 2247 94 3 0 chr2 228604267 228604553 -24652030 - AluSq SINE Alu -26 287 1 354 296 246 32 chr2 228604553 228604776 -24651807 + L2 LINE L2 2526 2966 -348 2403 97 7 0 chr2 228604852 228605152 -24651431 - AluSx SINE Alu -10 302 1 240 191 162 15 chr2 228605245 228605313 -24651270 + L2 LINE L2 3182 3259 -54 2234 114 10 0 chr2 228605689 228605987 -24650596 + AluSx SINE Alu 1 301 -11 474 209 126 53 chr2 228606682 228606888 -24649695 + L1ME LINE L1 5599 5819 -302 28 29 0 0 chr2 228607052 228607087 -24649496 + AT_rich Low_complexity Low_complexity 1 35 0 2430 72 30 7 chr2 228607164 228607468 -24649115 + AluY SINE Alu 1 311 0 325 250 65 28 chr2 228607484 228607592 -24648991 + L1ME4a LINE L1 5567 5678 -443 383 111 37 25 chr2 228607592 228607673 -24648910 + AluJ/FRAM SINE Alu 221 302 0 1974 158 0 10 chr2 228607688 228607980 -24648603 + AluSx SINE Alu 1 289 -23 198 0 0 0 chr2 228607984 228608006 -24648577 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 359 292 42 56 chr2 228608040 228608184 -24648399 + L1ME4a LINE L1 5714 5855 -266 706 229 0 0 chr2 228608185 228608316 -24648267 + FLAM_A SINE Alu 2 132 -1 2282 94 0 11 chr2 228608615 228608901 -24647682 - AluSq SINE Alu -30 283 1 2029 100 6 91 chr2 228609349 228609668 -24646915 + AluSq SINE Alu 5 296 -17 2506 89 0 0 chr2 228610057 228610360 -24646223 + AluSc SINE Alu 1 303 -6 667 203 52 145 chr2 228610564 228610622 -24645961 + HAL1 LINE L1 58 120 -2387 2385 97 7 0 chr2 228610622 228610930 -24645653 + AluSq SINE Alu 1 310 -3 667 203 52 145 chr2 228610930 228611120 -24645463 + HAL1 LINE L1 120 268 -2239 1797 125 0 73 chr2 228611120 228611273 -24645310 + AluSx SINE Alu 1 121 -191 2281 117 0 7 chr2 228611273 228611582 -24645001 + AluSq SINE Alu 3 309 -4 1797 125 0 73 chr2 228611582 228611741 -24644842 + AluSx SINE Alu 121 290 -22 667 203 52 145 chr2 228611741 228611836 -24644747 + HAL1 LINE L1 268 370 -2137 1759 110 12 16 chr2 228612301 228612555 -24644028 + AluSx SINE Alu 21 273 -39 360 0 0 0 chr2 228612573 228612613 -24643970 + (CA)n Simple_repeat Simple_repeat 2 41 0 2522 66 3 0 chr2 228612912 228613215 -24643368 - AluY SINE Alu -7 304 1 2230 103 3 19 chr2 228613225 228613535 -24643048 - AluSc SINE Alu -4 305 1 346 155 17 0 chr2 228613540 228613598 -24642985 + MER5B DNA MER1_type 120 178 0 1990 146 0 10 chr2 228613614 228613916 -24642667 - AluSx SINE Alu -13 299 1 1676 170 14 3 chr2 228614178 228614467 -24642116 + AluJo SINE Alu 1 292 -20 826 187 0 15 chr2 228614674 228614808 -24641775 + FLAM_C SINE Alu 2 133 0 1881 128 8 0 chr2 228614976 228615234 -24641349 - AluSx SINE Alu -52 260 1 350 230 27 0 chr2 228615257 228615331 -24641252 + MIR SINE MIR 187 262 0 1086 190 18 50 chr2 228615705 228615926 -24640657 - MER20 DNA MER1_type 0 219 6 1919 152 14 0 chr2 228616112 228616409 -24640174 - AluSx SINE Alu -11 301 1 1726 86 58 39 chr2 228616576 228616694 -24639889 - AluSq SINE Alu -51 262 148 387 0 0 0 chr2 228616694 228616737 -24639846 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 2358 76 0 0 chr2 228616737 228617025 -24639558 - AluSg SINE Alu -22 288 1 1726 86 58 39 chr2 228617025 228617162 -24639421 - AluSq SINE Alu -164 149 1 2234 102 3 7 chr2 228617261 228617566 -24639017 - AluSx SINE Alu -7 305 2 1952 117 3 59 chr2 228617576 228617900 -24638683 - AluSq SINE Alu -7 306 1 2253 99 3 7 chr2 228618068 228618372 -24638211 - AluSx SINE Alu -9 303 1 2451 79 0 0 chr2 228619189 228619493 -24637090 - AluY SINE Alu -7 304 1 682 356 84 37 chr2 228619550 228620112 -24636471 + L2 LINE L2 2376 2963 -351 412 245 41 0 chr2 228620190 228620288 -24636295 - L2 LINE L2 -13 3300 3199 185 325 0 0 chr2 228620287 228620327 -24636256 - L2 LINE L2 -369 2944 2905 * 525 347 43 43 chr2 228620303 228620328 -24636255 - L2 LINE L2 -1951 1363 1339 186 43 0 0 chr2 228620328 228620351 -24636232 + (GGGA)n Simple_repeat Simple_repeat 3 25 0 525 347 43 43 chr2 228620351 228620648 -24635935 - L2 LINE L2 -1974 1340 1041 236 271 86 0 chr2 228620613 228620683 -24635900 - MER5A DNA MER1_type -113 76 1 * 240 324 39 20 chr2 228620683 228620784 -24635799 - L2 LINE L2 -2505 809 707 589 288 222 10 chr2 228620799 228621087 -24635496 + L2 LINE L2 2140 2488 -826 2308 89 0 26 chr2 228621117 228621430 -24635153 + AluSx SINE Alu 1 305 -7 365 282 108 28 chr2 228621492 228621727 -24634856 - MLT1H1 LTR MaLR -285 270 10 460 246 62 114 chr2 228621728 228621842 -24634741 - L1MC4 LINE L1 -125 7917 7799 2107 131 3 10 chr2 228621842 228622139 -24634444 - AluSq SINE Alu -18 295 1 460 246 62 114 chr2 228622139 228622365 -24634218 - L1MC4 LINE L1 -243 7799 7595 448 330 56 22 chr2 228622401 228622580 -24634003 + L2 LINE L2 400 584 -2730 1642 138 28 8 chr2 228623161 228623414 -24633169 - Tigger3(Golem) DNA MER2_type 0 3029 2772 1233 107 6 6 chr2 228623736 228623913 -24632670 - AluSg/x SINE Alu -13 297 121 225 227 129 15 chr2 228624456 228624588 -24631995 - L1ME4a LINE L1 -1 6120 5974 1862 91 64 74 chr2 228624709 228624826 -24631757 + AluSx SINE Alu 1 118 -194 1892 133 25 7 chr2 228624826 228625133 -24631450 + AluSx SINE Alu 1 312 0 1862 91 64 74 chr2 228625133 228625312 -24631271 + AluSx SINE Alu 118 295 -17 1803 180 0 3 chr2 228625665 228625954 -24630629 + AluJb SINE Alu 1 288 -24 30 83 0 0 chr2 228629096 228629168 -24627415 + AT_rich Low_complexity Low_complexity 1 72 0 2164 116 7 0 chr2 228629238 228629532 -24627051 + AluSx SINE Alu 1 296 -16 1948 65 8 11 chr2 228629533 228629795 -24626788 + AluY SINE Alu 45 305 -6 415 277 85 7 chr2 228629949 228630147 -24626436 - MIR SINE MIR 0 262 11 300 317 171 0 chr2 228630325 228630448 -24626135 + MIR3 SINE MIR 65 208 0 2006 130 0 7 chr2 228630856 228631164 -24625419 - AluSq SINE Alu 0 306 1 2275 110 0 7 chr2 228631276 228631584 -24624999 - AluSg SINE Alu -4 306 1 2135 102 0 31 chr2 228631587 228631916 -24624667 - AluSx SINE Alu 0 320 1 873 177 20 94 chr2 228632435 228632638 -24623945 - MER5A DNA MER1_type -1 188 1 2071 124 3 0 chr2 228632659 228632968 -24623615 + AluSx SINE Alu 1 310 0 327 254 100 18 chr2 228633071 228633181 -24623402 - L1MC/D LINE L1 -559 5683 5565 2281 107 0 7 chr2 228633207 228633517 -24623066 + AluY SINE Alu 2 309 -2 1500 208 95 71 chr2 228633519 228633998 -24622585 - L1MC4 LINE L1 0 8042 7576 1621 166 49 0 chr2 228633998 228634282 -24622301 - AluJb SINE Alu -14 298 1 1952 150 3 13 chr2 228634284 228634460 -24622123 - AluSx SINE Alu -8 304 128 240 35 0 0 chr2 228634460 228634489 -24622094 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1837 122 48 7 chr2 228634489 228634759 -24621824 - AluSg SINE Alu -29 281 1 1952 150 3 13 chr2 228634759 228634888 -24621695 - AluSx SINE Alu -182 130 1 1500 208 95 71 chr2 228634888 228634952 -24621631 - L1MC4 LINE L1 -466 7576 7483 1091 93 0 182 chr2 228635013 228635249 -24621334 - 7SK RNA RNA 0 193 1 1778 167 11 7 chr2 228635254 228635541 -24621042 - AluJb SINE Alu -13 299 12 264 272 37 25 chr2 228635556 228635637 -24620946 - L1MC4 LINE L1 -598 7444 7363 1183 251 137 116 chr2 228635649 228637647 -24618936 + L1MEc LINE L1 38 2087 -4309 2360 88 7 0 chr2 228637647 228637952 -24618631 + AluSp SINE Alu 1 307 -6 1183 251 137 116 chr2 228637952 228638153 -24618430 + L1MEc LINE L1 2087 2282 -4114 713 222 53 29 chr2 228638176 228638383 -24618200 + L1MEc LINE L1 2379 2590 -3625 1657 191 3 32 chr2 228638638 228638947 -24617636 - AluJo SINE Alu -12 300 1 834 199 0 0 chr2 228638958 228639099 -24617484 - FLAM_C SINE Alu -2 141 1 709 285 69 77 chr2 228639104 228639245 -24617338 - HAL1b LINE L1 -440 908 767 1707 189 0 14 chr2 228639245 228639531 -24617052 - AluJb SINE Alu -30 282 1 709 285 69 77 chr2 228639531 228640075 -24616508 - HAL1b LINE L1 -581 767 220 1918 151 3 7 chr2 228640075 228640374 -24616209 - AluJo SINE Alu -13 299 2 709 285 69 77 chr2 228640374 228640498 -24616085 - HAL1b LINE L1 -1128 220 103 2254 102 20 0 chr2 228640498 228640793 -24615790 - AluSx SINE Alu -11 301 1 709 285 69 77 chr2 228640793 228640863 -24615720 - HAL1b LINE L1 -1245 103 34 2232 88 3 7 chr2 228641007 228641291 -24615292 - AluSx SINE Alu -14 298 16 1910 133 14 0 chr2 228641359 228641666 -24614917 - AluSx SINE Alu 0 311 1 604 276 69 35 chr2 228643425 228643657 -24612926 + MIR SINE MIR 2 241 -21 816 150 55 0 chr2 228643676 228643803 -24612780 + AluJo SINE Alu 2 135 -177 351 248 119 73 chr2 228644724 228644920 -24611663 - L1M3 LINE L1 -509 5657 5466 1706 183 0 7 chr2 228644920 228645221 -24611362 + AluSx SINE Alu 2 300 -12 351 248 119 73 chr2 228645221 228645327 -24611256 - L1M3 LINE L1 -700 5466 5366 1945 132 3 40 chr2 228645355 228645521 -24611062 - AluSx SINE Alu -19 293 141 2347 84 0 3 chr2 228645521 228645818 -24610765 - AluSq SINE Alu -17 296 1 1945 132 3 40 chr2 228645818 228645955 -24610628 - AluSx SINE Alu -171 141 1 250 260 19 124 chr2 228645987 228646252 -24610331 - L1M3 LINE L1 -1005 5141 4905 626 176 93 9 chr2 228646309 228646417 -24610166 + FLAM_C SINE Alu 2 118 -25 2173 113 0 19 chr2 228646432 228646750 -24609833 + AluSx SINE Alu 1 312 0 333 281 110 0 chr2 228646959 228647105 -24609478 - L1M3 LINE L1 -3829 2317 2156 373 278 80 37 chr2 228647127 228647289 -24609294 - L1MEd LINE L1 -4122 2188 2020 1296 172 5 9 chr2 228647324 228647539 -24609044 - AluJo SINE Alu -98 214 1 1690 191 36 53 chr2 228647594 228648007 -24608576 - L1ME1 LINE L1 -5 6161 5756 1895 152 0 30 chr2 228648024 228648326 -24608257 - AluJb SINE Alu -19 293 1 4364 200 90 12 chr2 228648326 228649363 -24607220 - L1MC4a LINE L1 -9 7799 6682 * 7211 71 8 6 chr2 228649356 228650929 -24605654 + L1PA8 LINE L1 4599 6173 0 1280 226 105 18 chr2 228650929 228651319 -24605264 - L1MC4 LINE L1 -1256 6786 6363 877 274 105 18 chr2 228651519 228652153 -24604430 - L1MEd LINE L1 -4592 1718 992 1305 203 0 0 chr2 228652174 228652386 -24604197 - AluJb SINE Alu -22 290 79 1760 208 81 99 chr2 228652671 228653426 -24603157 - HsTC2a DNA Tc2 -2 742 2 1280 139 150 30 chr2 228653844 228654111 -24602472 - AluSg SINE Alu -1 299 1 2067 130 7 13 chr2 228654150 228654450 -24602133 - AluSx SINE Alu -14 298 1 25 51 0 0 chr2 228654450 228654489 -24602094 + AT_rich Low_complexity Low_complexity 1 39 0 2193 121 0 7 chr2 228654554 228654860 -24601723 - AluSp SINE Alu -9 304 1 314 291 7 64 chr2 228654906 228655047 -24601536 - L1MC4 LINE L1 -370 7672 7540 2683 139 35 24 chr2 228655060 228655483 -24601100 + MSTA LTR MaLR 1 428 0 2782 82 14 8 chr2 228655535 228655899 -24600684 - L1PA8 LINE L1 -2 6170 5805 1859 145 0 7 chr2 228656097 228656380 -24600203 - AluJb SINE Alu -26 286 6 1483 176 47 47 chr2 228656490 228656786 -24599797 + AluJo SINE Alu 3 298 -14 250 71 167 0 chr2 228657016 228657058 -24599525 - MER46A DNA MER2_type 0 236 188 1044 96 0 7 chr2 228657058 228657194 -24599389 + AluSq/x SINE Alu 1 135 -177 2231 80 45 0 chr2 228657196 228657482 -24599101 + AluSq SINE Alu 1 299 -14 732 160 58 122 chr2 228657482 228657670 -24598913 - MER46A DNA MER2_type -60 176 1 827 177 14 14 chr2 228657779 228657920 -24598663 - BC200 scRNA scRNA -59 141 1 412 313 132 18 chr2 228657972 228658244 -24598339 - L1M4 LINE L1 -1913 4233 3931 239 317 96 12 chr2 228658276 228658443 -24598140 - L1M4 LINE L1 -2303 3843 3663 810 160 0 8 chr2 228658478 228658597 -24597986 - FLAM_C SINE Alu -20 123 6 2201 111 0 0 chr2 228658815 228659112 -24597471 - AluSx SINE Alu -15 297 1 1942 149 0 10 chr2 228659401 228659703 -24596880 + AluJb SINE Alu 1 299 -13 5238 77 21 12 chr2 228659892 228660435 -24596148 - L1PA13 LINE L1 -2 6161 5609 1579 98 13 13 chr2 228660435 228660659 -24595924 - AluSg/x SINE Alu -11 301 78 5238 77 21 12 chr2 228660659 228660790 -24595793 - L1PA13 LINE L1 -554 5609 5481 2634 36 3 0 chr2 228660988 228661294 -24595289 - AluY SINE Alu -4 307 1 1866 156 3 0 chr2 228662127 228662422 -24594161 + AluY SINE Alu 1 296 -15 3453 63 2 0 chr2 228662480 228662892 -24593691 - L1PA7 LINE L1 0 6154 5742 267 31 0 0 chr2 228663009 228663041 -24593542 + (A)n Simple_repeat Simple_repeat 1 32 0 237 33 0 0 chr2 228664523 228664553 -24592030 + (TG)n Simple_repeat Simple_repeat 2 31 0 2378 91 0 0 chr2 228665675 228665972 -24590611 + AluSg SINE Alu 1 297 -13 1889 132 3 43 chr2 228666076 228666401 -24590182 + AluJo SINE Alu 1 312 0 2237 132 0 0 chr2 228666597 228666908 -24589675 + AluSx SINE Alu 1 311 -1 549 209 126 53 chr2 228667193 228667399 -24589184 + L1ME LINE L1 5599 5819 -302 28 29 0 0 chr2 228667563 228667598 -24588985 + AT_rich Low_complexity Low_complexity 1 35 0 2378 72 30 7 chr2 228667675 228667979 -24588604 + AluY SINE Alu 1 311 0 432 105 35 23 chr2 228668103 228668189 -24588394 + AluJ/FRAM SINE Alu 221 307 -5 1919 158 0 10 chr2 228668199 228668491 -24588092 + AluSx SINE Alu 1 289 -23 198 0 0 0 chr2 228668495 228668517 -24588066 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 765 229 0 0 chr2 228668696 228668827 -24587756 + FLAM_A SINE Alu 2 132 -1 2233 94 0 11 chr2 228669128 228669414 -24587169 - AluSq SINE Alu -30 283 1 1995 100 6 91 chr2 228669862 228670181 -24586402 + AluSq SINE Alu 5 296 -17 2466 89 0 0 chr2 228670570 228670873 -24585710 + AluSc SINE Alu 1 303 -6 667 203 52 145 chr2 228671077 228671135 -24585448 + HAL1 LINE L1 58 120 -2387 2338 97 7 0 chr2 228671135 228671443 -24585140 + AluSq SINE Alu 1 310 -3 667 203 52 145 chr2 228671443 228671633 -24584950 + HAL1 LINE L1 120 268 -2239 1797 125 0 73 chr2 228671633 228671786 -24584797 + AluSx SINE Alu 1 121 -191 2281 117 0 7 chr2 228671786 228672095 -24584488 + AluSq SINE Alu 3 309 -4 1797 125 0 73 chr2 228672095 228672254 -24584329 + AluSx SINE Alu 121 290 -22 667 203 52 145 chr2 228672254 228672349 -24584234 + HAL1 LINE L1 268 370 -2137 1818 107 12 12 chr2 228672814 228673067 -24583516 + AluSx SINE Alu 21 273 -39 360 0 0 0 chr2 228673085 228673125 -24583458 + (CA)n Simple_repeat Simple_repeat 2 41 0 2565 66 0 0 chr2 228673424 228673728 -24582855 - AluY SINE Alu -7 304 1 2274 103 0 19 chr2 228673738 228674049 -24582534 - AluSc SINE Alu -4 305 1 346 155 17 0 chr2 228674054 228674112 -24582471 + MER5B DNA MER1_type 120 178 0 1990 146 0 10 chr2 228674128 228674430 -24582153 - AluSx SINE Alu -13 299 1 1676 170 14 3 chr2 228674692 228674981 -24581602 + AluJo SINE Alu 1 292 -20 826 187 0 15 chr2 228675188 228675322 -24581261 + FLAM_C SINE Alu 2 133 0 1911 124 8 0 chr2 228675490 228675748 -24580835 - AluSx SINE Alu -52 260 1 351 216 27 0 chr2 228675771 228675845 -24580738 + MIR SINE MIR 187 262 0 1086 190 18 50 chr2 228676219 228676440 -24580143 - MER20 DNA MER1_type 0 219 6 1919 152 14 0 chr2 228676626 228676923 -24579660 - AluSx SINE Alu -11 301 1 1726 86 58 39 chr2 228677090 228677208 -24579375 - AluSq SINE Alu -51 262 148 387 0 0 0 chr2 228677208 228677251 -24579332 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 2356 73 0 0 chr2 228677251 228677539 -24579044 - AluSg SINE Alu -22 288 1 1726 86 58 39 chr2 228677539 228677676 -24578907 - AluSq SINE Alu -164 149 1 2305 98 0 7 chr2 228677775 228678081 -24578502 - AluSx SINE Alu -7 305 2 1979 114 3 59 chr2 228678091 228678415 -24578168 - AluSq SINE Alu -7 306 1 2191 123 3 0 chr2 228678583 228678885 -24577698 - AluSx SINE Alu -9 303 1 416 301 88 9 chr2 228678885 228679111 -24577472 - L1MC4 LINE L1 -204 7838 7595 448 330 56 22 chr2 228679147 228679326 -24577257 + L2 LINE L2 400 584 -2730 1642 138 28 8 chr2 228679907 228680160 -24576423 - Tigger3(Golem) DNA MER2_type 0 3038 2781 1233 107 6 6 chr2 228680482 228680659 -24575924 - AluSg/x SINE Alu -13 297 121 225 227 129 15 chr2 228681202 228681334 -24575249 - L1ME4a LINE L1 -1 6120 5974 1862 91 64 74 chr2 228681455 228681572 -24575011 + AluSx SINE Alu 1 118 -194 1892 133 25 7 chr2 228681572 228681879 -24574704 + AluSx SINE Alu 1 312 0 1862 91 64 74 chr2 228681879 228682058 -24574525 + AluSx SINE Alu 118 295 -17 1803 180 0 3 chr2 228682411 228682700 -24573883 + AluJb SINE Alu 1 288 -24 30 83 0 0 chr2 228685842 228685914 -24570669 + AT_rich Low_complexity Low_complexity 1 72 0 2237 112 3 0 chr2 228685984 228686279 -24570304 + AluSx SINE Alu 1 296 -16 1964 64 8 11 chr2 228686280 228686544 -24570039 + AluY SINE Alu 45 307 -4 415 277 85 7 chr2 228686697 228686895 -24569688 - MIR SINE MIR 0 262 11 318 309 171 0 chr2 228687072 228687195 -24569388 + MIR3 SINE MIR 65 208 0 369 326 30 15 chr2 228687459 228687594 -24568989 + MER5A DNA MER1_type 44 180 -9 1489 166 106 3 chr2 228687789 228688072 -24568511 - AluJo SINE Alu 0 312 1 270 260 13 52 chr2 228688482 228688559 -24568024 - L2 LINE L2 -10 3262 3189 354 125 36 0 chr2 228689354 228689410 -24567173 + MER66A LTR ERV1 281 338 -140 246 156 0 0 chr2 228689712 228689757 -24566826 + A-rich Low_complexity Low_complexity 1 45 0 1925 111 0 0 chr2 228690029 228690291 -24566292 + AluSx SINE Alu 35 296 -16 852 158 0 8 chr2 228690297 228690424 -24566159 - FLAM_C SINE Alu -17 126 1 2274 109 0 0 chr2 228690458 228690785 -24565798 + AluSx SINE Alu 1 312 0 913 138 0 0 chr2 228691449 228691572 -24565011 - AluJb SINE Alu -189 123 1 216 0 0 0 chr2 228691754 228691778 -24564805 + (A)n Simple_repeat Simple_repeat 1 24 0 1599 178 20 26 chr2 228692532 228692836 -24563747 - AluSx SINE Alu -10 302 1 2580 49 0 3 chr2 228692839 228693144 -24563439 - AluY SINE Alu -7 304 1 2252 93 0 3 chr2 228693547 228693838 -24562745 - AluSc SINE Alu -19 290 1 22 0 0 0 chr2 228693946 228693968 -24562615 + AT_rich Low_complexity Low_complexity 1 22 0 1848 142 33 7 chr2 228694023 228694325 -24562258 + AluSx SINE Alu 3 312 0 2360 79 3 0 chr2 228694762 228695054 -24561529 - AluSp SINE Alu -20 293 1 1291 226 58 109 chr2 228695095 228695195 -24561388 - L1ME3A LINE L1 -13 6157 6053 2507 83 0 0 chr2 228695195 228695507 -24561076 + AluSx SINE Alu 1 312 0 1291 226 58 109 chr2 228695507 228695604 -24560979 - L1ME3A LINE L1 -117 6053 5953 2172 105 10 3 chr2 228695604 228695899 -24560684 - AluSq SINE Alu -16 297 1 1291 226 58 109 chr2 228695899 228696191 -24560392 - L1ME3A LINE L1 -217 5953 5695 2104 95 35 3 chr2 228696191 228696475 -24560108 + AluY SINE Alu 1 293 -18 1291 226 58 109 chr2 228696475 228696522 -24560061 - L1ME3A LINE L1 -475 5695 5647 203 125 0 0 chr2 228696743 228696775 -24559808 - L2 LINE L2 -2 3270 3239 1936 208 77 105 chr2 228696782 228697005 -24559578 + MLT1E1 LTR MaLR 7 235 -419 1892 155 3 3 chr2 228697005 228697296 -24559287 - AluJb SINE Alu -21 291 1 1936 208 77 105 chr2 228697296 228697737 -24558846 + MLT1E1 LTR MaLR 235 652 -2 1309 289 51 61 chr2 228697739 228698040 -24558543 - L2 LINE L2 -30 3283 2980 1771 175 0 3 chr2 228698040 228698332 -24558251 + AluJb SINE Alu 1 291 -21 1309 289 51 61 chr2 228698332 228698842 -24557741 - L2 LINE L2 -333 2980 2472 1758 166 10 10 chr2 228698847 228699142 -24557441 + AluJo SINE Alu 1 295 -17 2221 127 0 0 chr2 228699593 228699893 -24556690 - AluSx SINE Alu -12 300 1 274 293 104 15 chr2 228700382 228700641 -24555942 + HAL1b LINE L1 101 382 -966 1921 174 0 0 chr2 228701260 228701564 -24555019 - AluJb SINE Alu -8 304 1 754 186 0 16 chr2 228701666 228701795 -24554788 + AluJb SINE Alu 171 297 -15 2102 150 3 6 chr2 228702134 228702447 -24554136 + AluSx SINE Alu 1 312 0 2006 130 0 7 chr2 228702765 228703073 -24553510 - AluSq SINE Alu 0 306 1 2186 114 7 7 chr2 228703185 228703491 -24553092 - AluSg SINE Alu -4 306 1 2092 102 3 31 chr2 228703494 228703822 -24552761 - AluSx SINE Alu 0 320 1 873 177 20 94 chr2 228704341 228704544 -24552039 - MER5A DNA MER1_type -1 188 1 2071 124 3 0 chr2 228704565 228704874 -24551709 + AluSx SINE Alu 1 310 0 327 254 100 18 chr2 228704977 228705087 -24551496 - L1MC/D LINE L1 -559 5683 5565 2272 107 0 7 chr2 228705113 228705422 -24551161 + AluY SINE Alu 2 308 -3 1500 208 95 71 chr2 228705424 228705903 -24550680 - L1MC4 LINE L1 0 8042 7576 1621 166 49 0 chr2 228705903 228706187 -24550396 - AluJb SINE Alu -14 298 1 1996 149 0 13 chr2 228706189 228706366 -24550217 - AluSx SINE Alu -8 304 126 240 35 0 0 chr2 228706366 228706395 -24550188 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1837 122 48 7 chr2 228706395 228706665 -24549918 - AluSg SINE Alu -29 281 1 1996 149 0 13 chr2 228706665 228706794 -24549789 - AluSx SINE Alu -184 128 1 1500 208 95 71 chr2 228706794 228706858 -24549725 - L1MC4 LINE L1 -466 7576 7483 1091 93 0 182 chr2 228706919 228707155 -24549428 - 7SK RNA RNA 0 193 1 1754 171 11 7 chr2 228707160 228707447 -24549136 - AluJb SINE Alu -13 299 12 264 272 37 25 chr2 228707462 228707543 -24549040 - L1MC4 LINE L1 -598 7444 7363 1183 251 137 116 chr2 228707555 228709553 -24547030 + L1MEc LINE L1 38 2087 -4309 2387 85 7 0 chr2 228709553 228709858 -24546725 + AluSp SINE Alu 1 307 -6 1183 251 137 116 chr2 228709858 228710059 -24546524 + L1MEc LINE L1 2087 2282 -4114 713 222 53 29 chr2 228710082 228710289 -24546294 + L1MEc LINE L1 2379 2590 -3625 1657 191 3 32 chr2 228710544 228710853 -24545730 - AluJo SINE Alu -12 300 1 834 199 0 0 chr2 228710864 228711005 -24545578 - FLAM_C SINE Alu -2 141 1 781 283 75 72 chr2 228711010 228711151 -24545432 - HAL1b LINE L1 -440 908 769 1722 185 0 14 chr2 228711151 228711437 -24545146 - AluJb SINE Alu -30 282 1 781 283 75 72 chr2 228711437 228711981 -24544602 - HAL1b LINE L1 -579 769 217 1974 150 3 7 chr2 228711981 228712281 -24544302 - AluJo SINE Alu -12 300 2 781 283 75 72 chr2 228712281 228712402 -24544181 - HAL1b LINE L1 -1131 217 98 2319 101 20 0 chr2 228712405 228712703 -24543880 - AluSx SINE Alu -8 304 1 210 273 0 0 chr2 228712712 228712767 -24543816 + T-rich Low_complexity Low_complexity 1 55 0 2254 92 3 7 chr2 228712917 228713201 -24543382 - AluSx SINE Alu -14 298 16 1943 133 14 0 chr2 228713269 228713576 -24543007 - AluSx SINE Alu 0 311 1 357 294 63 74 chr2 228715066 228715335 -24541248 + L1MC4a LINE L1 5563 5828 -1980 601 280 65 30 chr2 228715335 228715567 -24541016 + MIR SINE MIR 2 241 -21 764 160 32 0 chr2 228715586 228715711 -24540872 + FLAM_C SINE Alu 2 130 -13 287 274 118 45 chr2 228716634 228716830 -24539753 - L1M3 LINE L1 -461 5660 5455 1765 183 0 7 chr2 228716830 228717131 -24539452 + AluSx SINE Alu 2 300 -12 287 274 118 45 chr2 228717131 228717240 -24539343 - L1M3 LINE L1 -666 5455 5355 1995 128 3 40 chr2 228717265 228717431 -24539152 - AluSx SINE Alu -19 293 141 2388 84 0 3 chr2 228717431 228717728 -24538855 - AluSq SINE Alu -17 296 1 1995 128 3 40 chr2 228717728 228717865 -24538718 - AluSx SINE Alu -171 141 1 537 276 17 117 chr2 228717873 228718163 -24538420 - L1M3 LINE L1 -981 5165 4905 605 176 93 9 chr2 228718220 228718328 -24538255 + FLAM_C SINE Alu 2 118 -25 2179 116 0 19 chr2 228718343 228718661 -24537922 + AluSx SINE Alu 1 312 0 416 269 96 36 chr2 228718870 228719037 -24537546 - L1M3 LINE L1 -3829 2317 2141 453 285 79 36 chr2 228719038 228719203 -24537380 - L1MEd LINE L1 -4122 2139 1968 1328 172 5 9 chr2 228719235 228719450 -24537133 - AluJo SINE Alu -98 214 1 1545 191 36 53 chr2 228719505 228719918 -24536665 - L1ME1 LINE L1 -5 6161 5756 1943 152 0 30 chr2 228719935 228720237 -24536346 - AluJb SINE Alu -19 293 1 3964 201 90 12 chr2 228720237 228721274 -24535309 - L1MC4a LINE L1 -9 7799 6682 * 6815 71 9 6 chr2 228721267 228722839 -24533744 + L1PA8 LINE L1 4599 6173 0 1168 228 105 18 chr2 228722839 228723229 -24533354 - L1MC4 LINE L1 -1256 6786 6363 742 282 101 14 chr2 228723429 228724063 -24532520 - L1MEd LINE L1 -4592 1669 943 1340 203 0 0 chr2 228724084 228724296 -24532287 - AluJb SINE Alu -22 290 79 356 227 123 49 chr2 228724331 228724494 -24532089 - L1MEd LINE L1 -5182 888 714 1514 213 82 101 chr2 228724581 228725336 -24531247 - HsTC2a DNA Tc2 -2 742 2 1199 142 150 30 chr2 228725754 228726021 -24530562 - AluSg SINE Alu -1 299 1 2102 132 7 13 chr2 228726057 228726360 -24530223 - AluSx SINE Alu -11 301 1 25 51 0 0 chr2 228726360 228726399 -24530184 + AT_rich Low_complexity Low_complexity 1 39 0 2239 121 0 7 chr2 228726464 228726770 -24529813 - AluSp SINE Alu -9 304 1 282 305 7 60 chr2 228726816 228726967 -24529616 - L1MC4 LINE L1 -370 7672 7530 2542 142 35 24 chr2 228726970 228727393 -24529190 + MSTA LTR MaLR 1 428 0 2685 85 14 3 chr2 228727445 228727809 -24528774 - L1PA8 LINE L1 0 6172 5805 499 275 139 106 chr2 228727897 228728007 -24528576 - L1M4 LINE L1 -1299 4847 4742 1867 144 0 11 chr2 228728007 228728291 -24528292 - AluJb SINE Alu -26 286 6 499 275 139 106 chr2 228728291 228728399 -24528184 - L1M4 LINE L1 -1404 4742 4639 1565 221 0 0 chr2 228728399 228728698 -24527885 + AluJo SINE Alu 1 299 -13 499 275 139 106 chr2 228728698 228728932 -24527651 - L1M4 LINE L1 -1507 4639 4379 233 71 167 0 chr2 228728932 228728974 -24527609 - MER46A DNA MER2_type 0 236 188 1063 96 0 7 chr2 228728974 228729110 -24527473 + AluSq/x SINE Alu 1 135 -178 2272 80 45 0 chr2 228729112 228729398 -24527185 + AluSq SINE Alu 1 299 -14 652 160 58 122 chr2 228729398 228729586 -24526997 - MER46A DNA MER2_type -60 176 1 306 284 49 10 chr2 228729586 228729688 -24526895 - L1M4 LINE L1 -1771 4375 4270 801 177 14 14 chr2 228729695 228729836 -24526747 - BC200 scRNA scRNA -59 141 1 354 281 0 16 chr2 228729888 228730009 -24526574 - L1M4 LINE L1 -1913 4233 4115 459 322 94 12 chr2 228730192 228730363 -24526220 - L1M4 LINE L1 -2303 3843 3659 773 160 0 8 chr2 228730394 228730513 -24526070 - FLAM_C SINE Alu -20 123 6 2159 116 0 7 chr2 228730728 228731030 -24525553 - AluSx SINE Alu -12 300 1 308 291 127 68 chr2 228731279 228731319 -24525264 - HAL1 LINE L1 -842 1665 1629 1994 149 0 10 chr2 228731319 228731621 -24524962 + AluJb SINE Alu 1 299 -13 308 291 127 68 chr2 228731621 228731800 -24524783 - HAL1 LINE L1 -878 1629 1433 4121 76 17 2 chr2 228731810 228732350 -24524233 - L1PA13 LINE L1 -2 6161 5614 2254 120 7 0 chr2 228732350 228732651 -24523932 - AluSx SINE Alu -8 304 2 358 231 115 23 chr2 228732660 228732790 -24523793 - MIR3 SINE MIR -64 144 3 2210 131 10 0 chr2 228733518 228733823 -24522760 - AluSx SINE Alu -4 308 1 1150 128 0 79 chr2 228733826 228733880 -24522703 - AluJo SINE Alu -125 187 130 2382 75 3 3 chr2 228733880 228734172 -24522411 - AluY SINE Alu -19 292 1 1150 128 0 79 chr2 228734172 228734320 -24522263 - AluJo SINE Alu -182 130 1 232 254 115 31 chr2 228734321 228734451 -24522132 + Charlie8 DNA MER1_type 135 275 -2142 2394 95 0 7 chr2 228734592 228734896 -24521687 - AluSx SINE Alu -10 302 1 736 181 22 60 chr2 228734953 228735135 -24521448 - MER96 DNA MER1_type 0 175 1 242 348 0 0 chr2 228735799 228735868 -24520715 - L2 LINE L2 -25 3247 3179 2128 104 11 4 chr2 228735948 228736226 -24520357 - AluSq SINE Alu -19 294 15 342 352 11 6 chr2 228737695 228737871 -24518712 + (TTGGGG)n Simple_repeat Simple_repeat 2 178 0 2209 108 13 19 chr2 228738337 228738644 -24517939 + AluSq SINE Alu 1 305 -8 511 182 106 7 chr2 228738936 228739075 -24517508 + MIR SINE MIR 35 183 -63 270 237 66 0 chr2 228739501 228739577 -24517006 - L3 LINE CR1 -77 1500 1420 2001 114 0 17 chr2 228740437 228740726 -24515857 - AluJo SINE Alu -28 284 1 2553 57 3 0 chr2 228741265 228741564 -24515019 + AluY SINE Alu 1 300 -11 2299 109 0 13 chr2 228741575 228741879 -24514704 + AluSq SINE Alu 3 302 -11 2073 141 0 0 chr2 228741888 228742179 -24514404 + AluSx SINE Alu 1 291 -21 2366 87 13 0 chr2 228742348 228742648 -24513935 + AluSx SINE Alu 1 304 -8 483 233 72 2 chr2 228742663 228742801 -24513782 + MIR SINE MIR 4 141 -67 777 192 60 20 chr2 228743215 228743366 -24513217 + FRAM SINE Alu 1 157 -19 481 294 215 45 chr2 228743457 228743851 -24512732 + L2 LINE L2 2217 2542 -730 2235 94 3 0 chr2 228743851 228744137 -24512446 - AluSq SINE Alu -26 287 1 481 294 215 45 chr2 228744137 228744436 -24512147 + L2 LINE L2 2542 2789 -483 2394 97 7 0 chr2 228744436 228744736 -24511847 - AluSx SINE Alu -10 302 1 481 294 215 45 chr2 228744736 228744897 -24511686 + L2 LINE L2 2789 3218 -54 2219 114 10 0 chr2 228745273 228745571 -24511012 + AluSx SINE Alu 1 301 -11 2065 147 6 13 chr2 228745992 228746306 -24510277 - AluJb SINE Alu 0 312 1 421 232 13 122 chr2 228746400 228746612 -24509971 + MER5A DNA MER1_type 1 186 -3 2421 102 0 0 chr2 228746612 228746916 -24509667 + AluSx SINE Alu 1 304 -8 258 32 0 0 chr2 228747652 228747683 -24508900 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 356 198 274 0 chr2 228748144 228748250 -24508333 + MER3 DNA MER1_type 20 154 -55 284 308 103 0 chr2 228748798 228748905 -24507678 + MIR3 SINE MIR 44 161 -47 318 335 32 19 chr2 228749498 228749656 -24506927 - L3b LINE CR1 -107 1476 1317 2115 125 0 20 chr2 228749704 228750007 -24506576 + AluSx SINE Alu 1 297 -15 224 217 0 0 chr2 228750180 228750226 -24506357 - L2 LINE L2 -54 3218 3173 246 247 97 11 chr2 228750235 228750328 -24506255 + L2 LINE L2 3161 3261 -11 321 309 82 45 chr2 228751446 228751630 -24504953 + L2 LINE L2 2693 2869 -445 2350 97 0 0 chr2 228751630 228751928 -24504655 - AluSp SINE Alu -15 298 1 2130 121 31 0 chr2 228751928 228752218 -24504365 - AluSx SINE Alu -13 299 1 321 309 82 45 chr2 228752218 228752301 -24504282 + L2 LINE L2 2868 2971 -343 597 133 0 0 chr2 228752303 228752386 -24504197 - AluS SINE Alu -228 84 2 2319 109 3 0 chr2 228752387 228752689 -24503894 - AluSx SINE Alu -9 303 1 254 321 37 0 chr2 228753198 228753307 -24503276 + (CCCCAA)n Simple_repeat Simple_repeat 5 117 0 278 260 52 0 chr2 228753535 228753612 -24502971 + L3 LINE CR1 1420 1500 -77 511 182 106 7 chr2 228754038 228754177 -24502406 - MIR SINE MIR -63 145 35 2209 108 13 19 chr2 228754469 228754776 -24501807 - AluSq SINE Alu -8 305 1 342 352 11 6 chr2 228755242 228755418 -24501165 + (CCCCAA)n Simple_repeat Simple_repeat 2 178 0 2128 104 11 4 chr2 228756887 228757165 -24499418 + AluSq SINE Alu 15 294 -19 242 348 0 0 chr2 228757245 228757314 -24499269 + L2 LINE L2 3179 3247 -25 759 176 22 60 chr2 228757978 228758160 -24498423 + MER96 DNA MER1_type 1 175 0 2394 95 0 7 chr2 228758217 228758521 -24498062 + AluSx SINE Alu 1 302 -10 232 254 115 31 chr2 228758662 228758792 -24497791 - Charlie8 DNA MER1_type -2153 264 124 1150 128 0 79 chr2 228758793 228758941 -24497642 + AluJo SINE Alu 1 130 -182 2435 75 0 3 chr2 228758941 228759234 -24497349 + AluY SINE Alu 1 292 -19 1150 128 0 79 chr2 228759234 228759288 -24497295 + AluJo SINE Alu 130 187 -125 2210 131 10 0 chr2 228759291 228759596 -24496987 + AluSx SINE Alu 1 308 -4 358 231 115 23 chr2 228760324 228760454 -24496129 + MIR3 SINE MIR 3 144 -64 2264 126 0 0 chr2 228760463 228760772 -24495811 + AluSx SINE Alu 2 310 -2 272 148 139 46 chr2 228760772 228760880 -24495703 - MER113 DNA MER1_type? -386 135 18 2214 111 0 23 chr2 228760883 228761190 -24495393 + AluSx SINE Alu 1 300 -12 353 233 20 53 chr2 228761680 228761830 -24494753 + GA-rich Low_complexity Low_complexity 6 150 0 244 254 18 0 chr2 228762213 228762268 -24494315 + L2 LINE L2 3173 3228 -44 2309 111 3 0 chr2 228762423 228762729 -24493854 - AluSx SINE Alu -5 307 1 364 276 48 0 chr2 228762767 228762872 -24493711 - MER5B DNA MER1_type -18 160 51 255 213 175 0 chr2 228762875 228762955 -24493628 - MER5B DNA MER1_type -83 95 2 2304 84 0 3 chr2 228763558 228763871 -24492712 - AluSq SINE Alu 0 312 1 241 194 217 116 chr2 228763885 228764014 -24492569 + MIR3 SINE MIR 66 207 -1 363 282 178 63 chr2 228764591 228764956 -24491627 + L2 LINE L2 2853 3259 -13 2543 74 0 0 chr2 228764957 228765267 -24491316 + AluY SINE Alu 1 310 -1 2198 135 3 0 chr2 228765383 228765694 -24490889 - AluSx SINE Alu 0 312 1 311 213 0 0 chr2 228766331 228766392 -24490191 - MER81 DNA DNA -1 113 53 2100 134 21 0 chr2 228766905 228767195 -24489388 - AluSx SINE Alu -16 296 1 2479 78 0 0 chr2 228767582 228767888 -24488695 - AluSg SINE Alu -4 306 1 3691 173 41 37 chr2 228768222 228768658 -24487925 - MER44D DNA MER2_type -1882 605 291 2187 121 3 10 chr2 228768658 228768964 -24487619 - AluSx SINE Alu -8 304 1 3691 173 41 37 chr2 228768964 228769257 -24487326 - MER44D DNA MER2_type -2196 291 1 1035 190 17 0 chr2 228769353 228769527 -24487056 + AluSg/x SINE Alu 110 286 -24 31 0 0 0 chr2 228769534 228769565 -24487018 + AT_rich Low_complexity Low_complexity 1 31 0 234 0 0 0 chr2 228769624 228769650 -24486933 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 315 0 0 0 chr2 228769649 228769684 -24486899 + (GA)n Simple_repeat Simple_repeat 2 36 0 315 0 0 0 chr2 228769843 228769878 -24486705 + (TA)n Simple_repeat Simple_repeat 2 36 0 * 477 0 0 0 chr2 228769877 228769930 -24486653 + (GA)n Simple_repeat Simple_repeat 2 54 0 2008 129 0 4 chr2 228769931 228770209 -24486374 - AluSx SINE Alu -35 277 1 1792 141 23 39 chr2 228770256 228770562 -24486021 - AluJb SINE Alu -10 302 2 703 306 89 34 chr2 228770562 228770755 -24485828 - L1ME4a LINE L1 -292 5829 5648 2447 57 0 72 chr2 228770755 228771087 -24485496 + AluY SINE Alu 1 308 -3 703 306 89 34 chr2 228771087 228771330 -24485253 - L1ME4a LINE L1 -473 5648 5365 2055 121 35 0 chr2 228771578 228771867 -24484716 - AluSx SINE Alu -9 303 5 2343 117 0 0 chr2 228771936 228772244 -24484339 - AluSc SINE Alu -1 308 1 2434 101 0 0 chr2 228772246 228772552 -24484031 - AluSx SINE Alu -4 308 3 419 306 91 22 chr2 228772584 228772786 -24483797 - L1MC5 LINE L1 -436 7525 7304 2228 108 0 3 chr2 228772786 228773082 -24483501 - AluSx SINE Alu -17 295 1 419 306 91 22 chr2 228773082 228773111 -24483472 - L1MC5 LINE L1 -657 7304 7278 378 250 174 30 chr2 228773113 228773245 -24483338 - MER5A DNA MER1_type 0 189 39 2291 113 0 0 chr2 228773507 228773808 -24482775 + AluSx SINE Alu 1 301 -11 2296 115 6 3 chr2 228773813 228774125 -24482458 + AluSq SINE Alu 1 313 0 2011 150 0 3 chr2 228774272 228774572 -24482011 - AluJb SINE Alu -13 299 1 234 214 229 0 chr2 228774633 228774703 -24481880 + L2 LINE L2 3227 3312 -1 2164 124 3 3 chr2 228774722 228775021 -24481562 - AluSx SINE Alu -12 300 2 910 151 32 65 chr2 228775096 228775282 -24481301 - AluSg/x SINE Alu -1 311 132 303 286 29 0 chr2 228775540 228775610 -24480973 - L1MC4 LINE L1 -1322 6720 6649 418 229 84 45 chr2 228775680 228775859 -24480724 - L1ME3A LINE L1 -23 6147 5962 237 293 17 0 chr2 228777418 228777476 -24479107 + MIR SINE MIR 39 97 -111 331 316 86 33 chr2 228777509 228777661 -24478922 - MER5A DNA MER1_type -1 188 29 2500 46 7 16 chr2 228777694 228777998 -24478585 + AluY SINE Alu 1 301 -10 773 159 30 15 chr2 228778838 228778970 -24477613 + AluJo SINE Alu 2 135 -177 2405 99 0 3 chr2 228779062 228779375 -24477208 + AluSx SINE Alu 1 312 0 1984 151 3 13 chr2 228779559 228779864 -24476719 - AluSq SINE Alu -11 302 1 332 204 239 84 chr2 228779865 228780007 -24476576 + MIR3 SINE MIR 44 207 -1 2214 114 7 0 chr2 228780438 228780735 -24475848 - AluSx SINE Alu -13 299 1 2040 81 73 0 chr2 228780757 228781044 -24475539 - AluSc SINE Alu 0 306 1 2158 111 14 0 chr2 228781329 228781626 -24474957 + AluSx SINE Alu 1 301 -11 464 231 0 11 chr2 228781746 228781837 -24474746 + MIR3 SINE MIR 72 161 -47 2411 108 0 0 chr2 228781945 228782250 -24474333 + AluSq SINE Alu 1 305 -8 1769 176 10 10 chr2 228782400 228782702 -24473881 - AluJo SINE Alu -10 302 1 2354 98 0 22 chr2 228782838 228783155 -24473428 - AluSg SINE Alu 0 310 1 1114 61 0 15 chr2 228783155 228783287 -24473296 - AluY SINE Alu -181 130 1 2097 100 10 10 chr2 228783287 228783586 -24472997 - AluSx SINE Alu -13 299 1 2288 88 27 0 chr2 228783810 228784107 -24472476 + AluY SINE Alu 1 305 -6 228 318 148 11 chr2 228784382 228784470 -24472113 + MIR SINE MIR 15 114 -148 578 179 24 8 chr2 228785053 228785176 -24471407 + MIR SINE MIR 133 257 -5 787 279 42 25 chr2 228785195 228785292 -24471291 + MIR SINE MIR 19 113 -149 1734 166 17 21 chr2 228785292 228785582 -24471001 + AluJo SINE Alu 1 289 -23 321 26 0 0 chr2 228785582 228785620 -24470963 + (CATA)n Simple_repeat Simple_repeat 2 39 0 787 279 42 25 chr2 228785620 228785761 -24470822 + MIR SINE MIR 112 262 0 270 0 0 0 chr2 228785762 228785792 -24470791 + (TA)n Simple_repeat Simple_repeat 1 30 0 * 531 0 0 0 chr2 228785791 228785850 -24470733 + (GA)n Simple_repeat Simple_repeat 2 60 0 342 259 82 99 chr2 228785882 228786175 -24470408 - L1 LINE L1 -2786 3360 3073 311 302 71 61 chr2 228786405 228786617 -24469966 + L1MC/D LINE L1 5615 5828 -1980 601 280 65 30 chr2 228786617 228786849 -24469734 + MIR SINE MIR 2 241 -21 764 160 32 0 chr2 228786868 228786993 -24469590 + FLAM_C SINE Alu 2 130 -13 287 274 118 45 chr2 228787916 228788112 -24468471 - L1M3 LINE L1 -461 5660 5455 1765 183 0 7 chr2 228788112 228788413 -24468170 + AluSx SINE Alu 2 300 -12 287 274 118 45 chr2 228788413 228788522 -24468061 - L1M3 LINE L1 -666 5455 5355 1967 132 3 40 chr2 228788547 228788713 -24467870 - AluSx SINE Alu -19 293 141 2317 88 3 3 chr2 228788713 228789009 -24467574 - AluSq SINE Alu -17 296 1 1967 132 3 40 chr2 228789009 228789146 -24467437 - AluSx SINE Alu -171 141 1 24 0 0 0 chr2 228789147 228789171 -24467412 + AT_rich Low_complexity Low_complexity 1 24 0 936 137 0 0 chr2 228790227 228790358 -24466225 + FLAM_C SINE Alu 1 131 -2 2443 86 0 10 chr2 228790362 228790675 -24465908 + AluSg SINE Alu 1 310 0 2290 120 0 22 chr2 228790685 228791002 -24465581 + AluSq SINE Alu 1 310 -3 2353 63 3 7 chr2 228791202 228791519 -24465064 + AluY SINE Alu 1 316 0 217 274 222 17 chr2 228791654 228791771 -24464812 - MIR3 SINE MIR -65 143 3 204 40 0 0 chr2 228792590 228792615 -24463968 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 222 37 0 0 chr2 228792661 228792688 -24463895 + (TA)n Simple_repeat Simple_repeat 1 27 0 2344 96 0 3 chr2 228792689 228792990 -24463593 - AluSg SINE Alu -10 300 1 538 197 0 55 chr2 228793070 228793197 -24463386 + AluJo SINE Alu 21 140 -172 509 107 0 0 chr2 228793198 228793273 -24463310 + U3 snRNA snRNA 1 75 -142 1890 158 3 7 chr2 228793278 228793576 -24463007 - AluJb SINE Alu -15 297 1 1584 138 32 28 chr2 228793614 228793897 -24462686 + AluSx SINE Alu 1 284 -28 31 0 0 0 chr2 228793931 228793962 -24462621 + AT_rich Low_complexity Low_complexity 1 31 0 1476 161 0 124 chr2 228793964 228794312 -24462271 + AluJo SINE Alu 1 305 -7 1943 149 3 10 chr2 228794329 228794625 -24461958 - AluSx SINE Alu -18 294 1 238 341 8 24 chr2 228794654 228794777 -24461806 - L2 LINE L2 -558 2756 2636 2503 83 0 3 chr2 228795191 228795503 -24461080 + AluY SINE Alu 1 311 0 711 78 0 0 chr2 228795859 228795962 -24460621 + L1MA1 LINE L1 6200 6302 0 22 0 0 0 chr2 228795962 228795984 -24460599 + AT_rich Low_complexity Low_complexity 1 22 0 208 331 89 41 chr2 228796400 228796569 -24460014 - L3b LINE CR1 -42 1541 1365 580 310 46 34 chr2 228797000 228797062 -24459521 - MIR SINE MIR 0 262 202 2492 87 3 3 chr2 228797062 228797373 -24459210 - AluSp SINE Alu -1 312 2 580 310 46 34 chr2 228797373 228797549 -24459034 - MIR SINE MIR -60 202 21 180 0 0 0 chr2 228797630 228797650 -24458933 + (TTCA)n Simple_repeat Simple_repeat 1 20 0 467 326 0 0 chr2 228797654 228797783 -24458800 - L2 LINE L2 -9 3304 3176 2262 123 16 3 chr2 228797832 228798140 -24458443 + AluSx SINE Alu 1 312 0 2384 102 0 3 chr2 228798219 228798532 -24458051 + AluSx SINE Alu 1 312 0 424 279 29 0 chr2 228798847 228798951 -24457632 + MIR SINE MIR 38 144 -64 2152 125 0 0 chr2 228799039 228799364 -24457219 + AluSx SINE Alu 1 312 0 1682 173 37 17 chr2 228799370 228799665 -24456918 + AluJo SINE Alu 3 303 -9 574 284 189 9 chr2 228799799 228800021 -24456562 + MIR SINE MIR 1 262 0 278 56 0 0 chr2 228800255 228800291 -24456292 + MIR SINE MIR 110 145 -63 720 176 5 96 chr2 228800301 228800357 -24456226 - MER3 DNA MER1_type -4 205 146 2188 88 3 26 chr2 228800357 228800665 -24455918 + AluY SINE Alu 1 301 -10 720 176 5 96 chr2 228800665 228800796 -24455787 - MER3 DNA MER1_type -63 146 35 2460 55 3 0 chr2 228800904 228801194 -24455389 - AluY SINE Alu -20 291 1 636 318 58 6 chr2 228801903 228802076 -24454507 + MIR SINE MIR 2 183 -79 2081 161 0 0 chr2 228802318 228802628 -24453955 + AluJb SINE Alu 3 312 0 2296 111 3 3 chr2 228803277 228803583 -24453000 + AluSp SINE Alu 1 306 -7 2262 110 3 3 chr2 228804547 228804846 -24451737 - AluSq SINE Alu -14 299 1 2152 116 10 3 chr2 228804897 228805191 -24451392 + AluSg SINE Alu 1 296 -14 310 333 38 8 chr2 228805199 228805331 -24451252 - L1M4 LINE L1 -1080 5066 4931 25 0 0 0 chr2 228806643 228806668 -24449915 + AT_rich Low_complexity Low_complexity 1 25 0 824 219 107 0 chr2 228808141 228808337 -24448246 + MIR SINE MIR 32 248 -14 1470 139 16 108 chr2 228808344 228808667 -24447916 + AluJo SINE Alu 1 293 -19 1988 131 28 0 chr2 228808729 228809019 -24447564 - AluSx SINE Alu -14 298 1 362 202 45 11 chr2 228809447 228809536 -24447047 + MIR SINE MIR 56 147 -115 490 229 0 18 chr2 228810775 228810884 -24445699 - MER94 DNA DNA -20 114 8 2291 117 3 0 chr2 228812349 228812656 -24443927 - AluSq SINE Alu -5 308 1 1272 169 41 0 chr2 228812928 228813147 -24443436 + AluJo SINE Alu 85 312 0 2562 63 0 22 chr2 228813159 228813479 -24443104 + AluY SINE Alu 1 313 0 209 278 0 19 chr2 228813795 228813849 -24442734 + MER5B DNA MER1_type 17 69 -109 184 233 81 81 chr2 228813809 228813895 -24442688 - MER5B DNA MER1_type -30 148 63 * 220 143 0 0 chr2 228814184 228814219 -24442364 + MIR SINE MIR 228 262 0 1960 127 10 32 chr2 228814316 228814624 -24441959 - AluJo SINE Alu -11 301 1 2594 47 7 0 chr2 228814629 228814929 -24441654 - AluY SINE Alu -9 302 1 1556 169 36 25 chr2 228814933 228815211 -24441372 - AluJo SINE Alu -20 292 12 662 191 95 42 chr2 228815219 228815387 -24441196 - MIR SINE MIR -73 189 13 492 212 29 80 chr2 228816530 228816667 -24439916 - AluJb SINE Alu -69 243 114 1551 150 131 15 chr2 228816668 228816942 -24439641 + AluSx SINE Alu 1 306 -6 637 217 0 17 chr2 228816960 228817075 -24439508 + AluJo/FLAM SINE Alu 4 116 -196 954 211 0 0 chr2 228817075 228817236 -24439347 - AluJb SINE Alu -21 291 131 14462 133 48 24 chr2 228817606 228819631 -24436952 + Tigger1 DNA MER2_type 1 1975 -443 2385 103 0 3 chr2 228819631 228819941 -24436642 + AluSg SINE Alu 1 309 -1 14462 133 48 24 chr2 228819941 228820092 -24436491 + Tigger1 DNA MER2_type 1975 2121 -297 1741 164 7 3 chr2 228820092 228820384 -24436199 + AluJb SINE Alu 1 293 -19 14462 133 48 24 chr2 228820384 228820564 -24436019 + Tigger1 DNA MER2_type 2121 2416 -2 307 284 75 15 chr2 228820686 228820820 -24435763 - HAL1 LINE L1 -145 2362 2221 2088 139 0 22 chr2 228821651 228821968 -24434615 + AluSx SINE Alu 1 310 -2 2342 81 0 7 chr2 228822528 228822824 -24433759 + AluSg SINE Alu 1 294 -16 2075 100 9 47 chr2 228822875 228823019 -24433564 + AluSq SINE Alu 1 149 -164 2367 82 3 0 chr2 228823019 228823311 -24433272 + AluY SINE Alu 1 293 -18 2075 100 9 47 chr2 228823311 228823487 -24433096 + AluSq SINE Alu 149 309 -4 548 253 7 7 chr2 228824059 228824205 -24432378 + LTR16A1 LTR ERVL 312 457 0 572 207 21 14 chr2 228824450 228824595 -24431988 + L1MB7 LINE L1 6038 6183 -1 1268 229 76 71 chr2 228824596 228825083 -24431500 + MLT1H LTR MaLR 19 541 -8 552 314 32 39 chr2 228825226 228825506 -24431077 + ERVL LTR ERVL 3213 3490 -2164 1509 324 85 23 chr2 228825531 228826251 -24430332 + ERVL LTR ERVL 3595 4269 -1216 4189 163 5 73 chr2 228826251 228826409 -24430174 - MER44D DNA MER2_type -1882 605 438 1772 171 31 0 chr2 228826409 228826702 -24429881 - AluJb SINE Alu -10 302 1 4189 163 5 73 chr2 228826702 228826876 -24429707 - MER44D DNA MER2_type -2049 438 254 1978 153 7 0 chr2 228826876 228827170 -24429413 + AluJb SINE Alu 1 296 -16 2203 111 0 0 chr2 228827173 228827462 -24429121 + AluSg SINE Alu 1 289 -21 4189 163 5 73 chr2 228827462 228827799 -24428784 - MER44D DNA MER2_type -2235 252 117 1537 171 33 40 chr2 228827799 228828098 -24428485 + AluJo SINE Alu 1 297 -15 4189 163 5 73 chr2 228828098 228828207 -24428376 - MER44D DNA MER2_type -2370 117 2 1509 324 85 23 chr2 228828207 228828448 -24428135 + ERVL LTR ERVL 4269 4616 -869 834 312 78 65 chr2 228828520 228829106 -24427477 + ERVL LTR ERVL 4735 5328 -157 532 289 118 66 chr2 228829378 228829710 -24426873 + LTR16A1 LTR ERVL 107 455 -2 238 323 40 24 chr2 228830202 228830326 -24426257 + LTR67 LTR ERVL 432 557 0 232 152 43 22 chr2 228830340 228830386 -24426197 + MLT1H-int LTR MaLR 16 62 -1309 2365 104 0 0 chr2 228830663 228830971 -24425612 + AluSx SINE Alu 1 308 -4 2198 99 33 13 chr2 228830973 228831277 -24425306 + AluY SINE Alu 1 310 -1 564 174 18 9 chr2 228831429 228831538 -24425045 + L1MD3 LINE L1 7884 7993 -2 2254 110 0 19 chr2 228831540 228831858 -24424725 + AluSx SINE Alu 1 312 0 1493 187 11 21 chr2 228832939 228833248 -24423335 + AluJo SINE Alu 1 306 0 1491 167 82 20 chr2 228833633 228833927 -24422656 + AluJb SINE Alu 1 312 0 8027 128 37 19 chr2 228834236 228835228 -24421355 + Tigger1 DNA MER2_type 1068 2041 -377 2393 103 0 3 chr2 228835228 228835539 -24421044 + AluSg SINE Alu 1 310 0 8027 128 37 19 chr2 228835539 228835690 -24420893 + Tigger1 DNA MER2_type 2041 2188 -230 1741 164 7 3 chr2 228835690 228835982 -24420601 + AluJb SINE Alu 1 293 -19 8027 128 37 19 chr2 228835982 228836162 -24420421 + Tigger1 DNA MER2_type 2188 2416 -2 307 284 75 15 chr2 228836284 228836418 -24420165 - HAL1 LINE L1 -145 2362 2221 2088 139 0 22 chr2 228837249 228837566 -24419017 + AluSx SINE Alu 1 310 -2 2342 81 0 7 chr2 228838126 228838422 -24418161 + AluSg SINE Alu 1 294 -16 2064 105 9 46 chr2 228838473 228838617 -24417966 + AluSq SINE Alu 1 149 -164 2377 82 3 0 chr2 228838617 228838910 -24417673 + AluY SINE Alu 1 294 -17 2064 105 9 46 chr2 228838910 228839090 -24417493 + AluSq SINE Alu 149 313 0 548 253 7 7 chr2 228839657 228839803 -24416780 + LTR16A1 LTR ERVL 312 457 0 572 207 21 14 chr2 228840048 228840193 -24416390 + L1MB7 LINE L1 6038 6183 -1 1268 229 76 71 chr2 228840194 228840681 -24415902 + MLT1H LTR MaLR 19 541 -8 573 311 32 39 chr2 228840824 228841104 -24415479 + ERVL LTR ERVL 3213 3490 -2164 1546 324 84 23 chr2 228841129 228841850 -24414733 + ERVL LTR ERVL 3595 4270 -1215 4189 163 5 73 chr2 228841850 228842008 -24414575 - MER44D DNA MER2_type -1882 605 438 1772 171 31 0 chr2 228842008 228842301 -24414282 - AluJb SINE Alu -10 302 1 4189 163 5 73 chr2 228842301 228842475 -24414108 - MER44D DNA MER2_type -2049 438 254 1978 153 7 0 chr2 228842475 228842769 -24413814 + AluJb SINE Alu 1 296 -16 2203 111 0 0 chr2 228842772 228843061 -24413522 + AluSg SINE Alu 1 289 -21 4189 163 5 73 chr2 228843061 228843398 -24413185 - MER44D DNA MER2_type -2235 252 117 1537 171 33 40 chr2 228843398 228843697 -24412886 + AluJo SINE Alu 1 297 -15 4189 163 5 73 chr2 228843697 228843806 -24412777 - MER44D DNA MER2_type -2370 117 2 1546 324 84 23 chr2 228843806 228844047 -24412536 + ERVL LTR ERVL 4270 4616 -869 834 312 78 65 chr2 228844119 228844705 -24411878 + ERVL LTR ERVL 4735 5328 -157 502 288 117 69 chr2 228844977 228845310 -24411273 + LTR16A1 LTR ERVL 107 455 -2 238 323 40 24 chr2 228845802 228845926 -24410657 + LTR67 LTR ERVL 432 557 0 2390 100 0 0 chr2 228846263 228846572 -24410011 + AluSx SINE Alu 1 309 -3 2206 98 33 13 chr2 228846574 228846879 -24409704 + AluY SINE Alu 1 311 0 564 174 18 9 chr2 228847030 228847139 -24409444 + L1MD3 LINE L1 7884 7993 -2 2243 110 0 16 chr2 228847141 228847450 -24409133 + AluSx SINE Alu 1 304 -8 225 0 0 0 chr2 228847450 228847475 -24409108 + (TA)n Simple_repeat Simple_repeat 2 26 0 * 279 0 0 0 chr2 228847474 228847505 -24409078 + (GA)n Simple_repeat Simple_repeat 2 32 0 917 290 85 19 chr2 228848246 228848553 -24408030 + MLT1J LTR MaLR 97 423 -88 22 0 0 0 chr2 228848909 228848931 -24407652 + AT_rich Low_complexity Low_complexity 1 22 0 2029 115 7 14 chr2 228849476 228849762 -24406821 - AluSc SINE Alu -25 284 1 806 206 65 12 chr2 228850218 228850388 -24406195 + AluJo SINE Alu 120 298 -14 436 260 20 10 chr2 228850402 228850455 -24406128 - MER5B DNA MER1_type -71 107 51 194 0 0 37 chr2 228850455 228850482 -24406101 + (TTG)n Simple_repeat Simple_repeat 2 27 0 436 260 20 10 chr2 228850482 228850528 -24406055 - MER5B DNA MER1_type -127 51 7 180 0 0 0 chr2 228850627 228850647 -24405936 + (A)n Simple_repeat Simple_repeat 1 20 0 227 190 35 35 chr2 228851280 228851338 -24405245 - L1MC4a LINE L1 -1866 5942 5885 1872 153 3 11 chr2 228851399 228851686 -24404897 - AluJb SINE Alu -27 285 1 527 257 77 6 chr2 228851687 228851870 -24404713 + MER112 DNA MER1_type 32 227 -33 726 268 64 42 chr2 228851964 228852277 -24404306 + L1ME1 LINE L1 5844 6163 -3 2284 104 3 0 chr2 228852508 228852807 -24403776 - AluSx SINE Alu -12 300 1 23 0 0 0 chr2 228852962 228852985 -24403598 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 228853019 228853041 -24403542 + AT_rich Low_complexity Low_complexity 1 22 0 28 61 0 0 chr2 228853445 228853494 -24403089 + AT_rich Low_complexity Low_complexity 1 49 0 255 61 0 0 chr2 228853661 228853694 -24402889 + (A)n Simple_repeat Simple_repeat 1 33 0 198 329 61 0 chr2 228854312 228854394 -24402189 - MIR SINE MIR -57 151 65 382 299 116 37 chr2 228854410 228854651 -24401932 - MIR SINE MIR -2 260 1 2480 71 0 0 chr2 228854841 228855137 -24401446 - AluY SINE Alu -15 296 1 772 193 28 55 chr2 228855481 228855662 -24400921 + FRAM SINE Alu 1 176 0 534 150 0 25 chr2 228855892 228856009 -24400574 + AluSg/x SINE Alu 210 310 0 2530 194 8 4 chr2 228856045 228856525 -24400058 - L1 LINE L1 -1911 4235 3754 631 158 180 7 chr2 228857202 228857341 -24399242 + MER6B DNA MER2_type 47 209 -1 2115 137 0 0 chr2 228857510 228857809 -24398774 + AluSx SINE Alu 1 299 -13 24 53 0 0 chr2 228858402 228858440 -24398143 + AT_rich Low_complexity Low_complexity 1 38 0 2482 84 3 0 chr2 228859550 228859859 -24396724 - AluSq SINE Alu -3 310 1 1536 161 88 22 chr2 228859942 228860215 -24396368 - AluJo SINE Alu -21 291 1 2413 82 0 25 chr2 228860693 228861010 -24395573 + AluSg SINE Alu 1 309 -1 1493 187 11 21 chr2 228862072 228862381 -24394202 + AluJo SINE Alu 1 306 0 1491 167 82 20 chr2 228862766 228863060 -24393523 + AluJb SINE Alu 1 312 0 207 295 262 0 chr2 228863388 228863510 -24393073 + MIR SINE MIR 61 214 -48 299 226 16 0 chr2 228863614 228863676 -24392907 - Charlie8 DNA MER1_type 0 2417 2355 849 276 26 13 chr2 228863683 228863911 -24392672 - Charlie8 DNA MER1_type -2186 231 1 181 222 14 97 chr2 228864005 228864077 -24392506 - L2 LINE L2 0 3313 3248 259 337 32 42 chr2 228864412 228864425 -24392158 + L2 LINE L2 2654 2666 -648 2245 90 24 0 chr2 228864425 228864715 -24391868 + AluSx SINE Alu 4 300 -12 259 337 32 42 chr2 228864715 228864891 -24391692 + L2 LINE L2 2666 2841 -473 2200 96 3 0 chr2 228865928 228866229 -24390354 + AluSp SINE Alu 1 302 -11 291 234 122 28 chr2 228866709 228866816 -24389767 - L2 LINE L2 -1 3271 3155 1797 126 9 57 chr2 228866817 228867135 -24389448 + AluSx SINE Alu 1 303 -9 188 276 0 69 chr2 228867151 228867238 -24389345 + L2 LINE L2 2419 2499 -815 602 274 101 51 chr2 228867299 228867526 -24389057 - MIR SINE MIR -8 254 14 26 0 0 27 chr2 228867942 228867963 -24388620 + AT_rich Low_complexity Low_complexity 1 22 -14 1700 182 0 3 chr2 228867963 228868265 -24388318 - AluJb SINE Alu -11 301 1 26 0 0 27 chr2 228868265 228868280 -24388303 + AT_rich Low_complexity Low_complexity 22 36 0 2062 118 3 3 chr2 228868809 228869098 -24387485 + AluSq SINE Alu 1 289 -24 410 313 100 69 chr2 228869196 228869618 -24386965 - L2 LINE L2 -222 3050 2618 438 225 116 51 chr2 228869636 228869774 -24386809 - MIR SINE MIR 0 262 116 * 632 303 182 37 chr2 228869760 228870195 -24386388 - L2 LINE L2 -685 2629 2132 425 294 88 86 chr2 228870196 228870580 -24386003 + L2 LINE L2 1937 2321 -993 189 74 0 0 chr2 228871385 228871412 -24385171 + (CACG)n Simple_repeat Simple_repeat 1 27 0 215 287 52 81 chr2 228872283 228872419 -24384164 - L2 LINE L2 0 3272 3141 * 237 314 81 0 chr2 228872401 228872487 -24384096 - MIR3 SINE MIR -18 190 98 389 321 104 30 chr2 228872544 228872812 -24383771 + L2 LINE L2 2686 2973 -341 445 298 182 31 chr2 228872850 228873169 -24383414 + L2 LINE L2 2947 3313 0 830 201 6 0 chr2 228874320 228874484 -24382099 + FAM SINE Alu 10 174 -11 2101 93 3 42 chr2 228874612 228874924 -24381659 - AluSp SINE Alu -13 300 1 2159 128 0 0 chr2 228875079 228875392 -24381191 + AluSq SINE Alu 1 313 0 557 161 5 22 chr2 228875475 228875685 -24380898 + AluJo SINE Alu 14 297 -15 1982 127 10 0 chr2 228876077 228876377 -24380206 + AluSq SINE Alu 1 303 -10 21 0 0 0 chr2 228876698 228876719 -24379864 + AT_rich Low_complexity Low_complexity 1 21 0 1716 151 49 0 chr2 228876997 228877281 -24379302 - AluSx SINE Alu -1 311 14 267 292 104 0 chr2 228877588 228877684 -24378899 + MIR SINE MIR 25 130 -132 216 114 57 0 chr2 228877715 228877750 -24378833 + L2 LINE L2 3261 3297 -16 800 198 37 62 chr2 228877763 228878006 -24378577 + L1ME2 LINE L1 5928 6164 0 393 346 45 13 chr2 228878052 228878208 -24378375 - MIR3 SINE MIR -14 194 34 1974 87 12 65 chr2 228878414 228878736 -24377847 - AluY SINE Alu -1 310 6 1883 159 3 0 chr2 228879724 228880020 -24376563 + AluSx SINE Alu 1 297 -15 495 211 134 20 chr2 228880062 228880238 -24376345 + MIR SINE MIR 2 241 -21 263 280 109 51 chr2 228882251 228882532 -24374051 - L1MC4a LINE L1 -1779 6029 5729 2270 75 0 3 chr2 228882532 228882825 -24373758 - AluY SINE Alu -19 292 1 263 280 109 51 chr2 228882825 228882836 -24373747 - L1MC4a LINE L1 -2079 5729 5720 947 158 0 0 chr2 228882836 228883021 -24373562 - AluSg/x SINE Alu 0 319 135 2010 94 45 0 chr2 228883021 228883307 -24373276 - AluSx SINE Alu -13 299 1 329 254 92 21 chr2 228883309 228883451 -24373132 - L1MC4a LINE L1 -2081 5727 5576 491 263 18 70 chr2 228883905 228884076 -24372507 - MER5A DNA MER1_type -22 167 6 2017 131 3 10 chr2 228884195 228884507 -24372076 - AluSg SINE Alu 0 310 1 1938 147 3 0 chr2 228884837 228885136 -24371447 + AluJb SINE Alu 1 300 -12 2371 62 0 0 chr2 228885446 228885738 -24370845 + AluY SINE Alu 1 292 -19 315 0 0 0 chr2 228886231 228886266 -24370317 + (TG)n Simple_repeat Simple_repeat 2 36 0 288 0 0 0 chr2 228886265 228886297 -24370286 + (TC)n Simple_repeat Simple_repeat 1 32 0 * 519 235 25 8 chr2 228886473 228886592 -24369991 - MER117 DNA MER1_type -76 121 1 21 0 0 0 chr2 228886858 228886879 -24369704 + AT_rich Low_complexity Low_complexity 1 21 0 1075 183 4 77 chr2 228887234 228887469 -24369114 - MER20 DNA MER1_type -1 218 1 670 191 22 44 chr2 228888092 228888228 -24368355 - FLAM_A SINE Alu -1 141 9 1159 78 31 68 chr2 228888399 228888590 -24367993 + AluSg/x SINE Alu 110 293 -17 851 184 76 53 chr2 228888594 228888632 -24367951 + L1M4 LINE L1 4329 4365 -1781 1519 168 7 18 chr2 228888632 228888947 -24367636 - AluJo SINE Alu 0 312 1 851 184 76 53 chr2 228888947 228889211 -24367372 + L1M4 LINE L1 4365 4639 -1507 1093 187 50 61 chr2 228889212 228889490 -24367093 + MLT1A2 LTR MaLR 1 275 -99 1386 122 5 0 chr2 228889494 228889699 -24366884 - AluSg/x SINE Alu -12 300 95 1799 135 35 0 chr2 228889844 228890133 -24366450 + AluSx SINE Alu 1 299 -13 1286 195 57 4 chr2 228890133 228890395 -24366188 + AluJo SINE Alu 2 277 -35 942 175 92 34 chr2 228890424 228890524 -24366059 + AluJo SINE Alu 12 105 -207 1666 124 18 22 chr2 228890524 228890797 -24365786 - AluSg1 SINE Alu -37 272 1 942 175 92 34 chr2 228890797 228890810 -24365773 + AluJo SINE Alu 105 116 -196 216 0 0 0 chr2 228890810 228890834 -24365749 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 942 175 92 34 chr2 228890834 228890925 -24365658 + AluJo SINE Alu 116 229 -83 2194 81 10 13 chr2 228890940 228891250 -24365333 + AluY SINE Alu 1 309 -2 1900 168 0 0 chr2 228891261 228891559 -24365024 + AluSx SINE Alu 1 298 -14 851 248 81 23 chr2 228891623 228891857 -24364726 + L1M4 LINE L1 3595 3814 -2332 2004 119 11 0 chr2 228891857 228892142 -24364441 + AluSx SINE Alu 3 290 -22 851 248 81 23 chr2 228892142 228892220 -24364363 + L1M4 LINE L1 3814 3886 -2260 2168 93 23 0 chr2 228892220 228892520 -24364063 + AluSx SINE Alu 1 307 -5 851 248 81 23 chr2 228892520 228892578 -24364005 + L1M4 LINE L1 3886 3983 -2163 857 222 75 86 chr2 228892640 228892741 -24363842 + L1M4 LINE L1 4175 4276 -1870 2132 75 25 0 chr2 228892741 228893019 -24363564 + AluSg SINE Alu 1 285 -25 857 222 75 86 chr2 228893019 228893097 -24363486 + L1M4 LINE L1 4276 4353 -1793 2219 98 0 0 chr2 228893097 228893394 -24363189 + AluSg SINE Alu 1 297 -13 857 222 75 86 chr2 228893394 228893731 -24362852 + L1M4 LINE L1 4353 4688 -1458 1481 141 108 22 chr2 228893731 228893898 -24362685 - AluJo SINE Alu -11 301 99 2139 102 3 19 chr2 228893898 228894212 -24362371 - AluSg1 SINE Alu 0 309 1 1481 141 108 22 chr2 228894212 228894321 -24362262 - AluJo SINE Alu -213 99 1 857 222 75 86 chr2 228894321 228894348 -24362235 + L1M4 LINE L1 4688 4714 -1432 1758 135 0 45 chr2 228894361 228894463 -24362120 - AluSx SINE Alu -15 297 192 2085 82 29 23 chr2 228894463 228894769 -24361814 - AluSp SINE Alu -5 308 1 1758 135 0 45 chr2 228894769 228894977 -24361606 - AluSx SINE Alu -120 192 1 993 175 103 0 chr2 228894997 228895191 -24361392 - AluJo SINE Alu -14 298 85 2278 97 0 6 chr2 228895194 228895505 -24361078 - AluSp SINE Alu -4 309 1 1863 130 3 20 chr2 228895545 228895846 -24360737 - AluSx SINE Alu -16 296 1 468 91 0 0 chr2 228896077 228896143 -24360440 + (CA)n Simple_repeat Simple_repeat 1 66 0 2031 113 0 35 chr2 228896212 228896522 -24360061 - AluSx SINE Alu -13 299 1 2217 90 3 10 chr2 228896532 228896844 -24359739 - AluSg SINE Alu 0 310 1 911 138 0 0 chr2 228896848 228896978 -24359605 - FLAM_C SINE Alu -3 130 1 24 0 0 0 chr2 228898033 228898057 -24358526 + AT_rich Low_complexity Low_complexity 1 24 0 1910 112 17 14 chr2 228898058 228898354 -24358229 + AluSx SINE Alu 1 297 -15 638 131 57 8 chr2 228898456 228898578 -24358005 - AluSq/x SINE Alu -182 131 4 1685 85 78 12 chr2 228898872 228899130 -24357453 + AluSc SINE Alu 11 285 -24 2068 114 7 0 chr2 228899174 228899471 -24357112 + AluSx SINE Alu 1 299 -13 333 204 239 84 chr2 228899902 228900044 -24356539 - MIR3 SINE MIR -1 207 44 1983 134 0 13 chr2 228900045 228900351 -24356232 + AluSq SINE Alu 1 302 -11 2101 114 20 0 chr2 228900535 228900841 -24355742 - AluSx SINE Alu 0 312 1 360 202 45 11 chr2 228901270 228901359 -24355224 + MIR SINE MIR 56 147 -115 522 220 0 18 chr2 228902598 228902707 -24353876 - MER94 DNA DNA -20 114 8 2094 118 7 0 chr2 228904172 228904478 -24352105 - AluSq SINE Alu -5 308 1 1156 169 41 0 chr2 228904749 228904968 -24351615 + AluJo SINE Alu 85 312 0 2408 63 0 22 chr2 228904980 228905296 -24351287 + AluY SINE Alu 1 309 -2 207 278 0 19 chr2 228905616 228905670 -24350913 + MER5B DNA MER1_type 17 69 -109 180 233 81 81 chr2 228905630 228905716 -24350867 - MER5B DNA MER1_type -30 148 63 * 224 143 0 0 chr2 228906004 228906039 -24350544 + MIR SINE MIR 228 262 0 1712 128 20 36 chr2 228906136 228906442 -24350141 - AluJo SINE Alu -11 301 1 2446 47 7 3 chr2 228906447 228906748 -24349835 - AluY SINE Alu -9 302 1 1300 195 25 11 chr2 228906752 228907029 -24349554 - AluJo SINE Alu -20 292 12 642 189 95 47 chr2 228907037 228907206 -24349377 - MIR SINE MIR -73 189 13 626 285 107 33 chr2 228910962 228911204 -24345379 - MIR SINE MIR -1 261 2 1702 166 34 0 chr2 228911613 228911908 -24344675 - AluSx SINE Alu -7 305 1 2081 96 0 20 chr2 228912435 228912738 -24343845 - AluSx SINE Alu -11 301 5 230 300 0 0 chr2 228912920 228912980 -24343603 - MIR SINE MIR -2 260 201 1721 71 0 0 chr2 228912997 228913208 -24343375 + AluY SINE Alu 1 211 -100 1226 93 17 0 chr2 228913309 228913481 -24343102 + AluY SINE Alu 120 294 -17 454 210 0 0 chr2 228913495 228913576 -24343007 - MIR SINE MIR -77 185 105 510 239 210 6 chr2 228914443 228914619 -24341964 + MIR SINE MIR 1 212 -50 1975 163 16 0 chr2 228917020 228917326 -24339257 - AluJb SINE Alu -1 311 1 474 244 73 24 chr2 228918472 228918595 -24337988 + L2 LINE L2 3184 3312 -1 2267 89 7 3 chr2 228919041 228919333 -24337250 + AluSc SINE Alu 1 293 -16 2255 102 14 0 chr2 228919338 228919632 -24336951 + AluSp SINE Alu 1 298 -15 1143 171 0 6 chr2 228919985 228920161 -24336422 - FAM SINE Alu 0 175 1 308 301 22 19 chr2 228921219 228921324 -24335259 + MIR3 SINE MIR 68 175 -33 2256 110 3 3 chr2 228921324 228921624 -24334959 - AluSx SINE Alu -12 300 1 308 301 22 19 chr2 228921624 228921659 -24334924 + MIR3 SINE MIR 175 208 0 270 314 51 67 chr2 228921688 228921943 -24334640 + L2 LINE L2 2804 3054 -218 2111 121 14 0 chr2 228921944 228922233 -24334350 - AluSx SINE Alu -19 293 1 1898 166 45 83 chr2 228922240 228922594 -24333989 - L1MC4 LINE L1 -64 7978 7612 234 0 0 0 chr2 228922594 228922620 -24333963 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1750 158 18 0 chr2 228922623 228922896 -24333687 - AluJb SINE Alu -34 278 1 1898 166 45 83 chr2 228922896 228923090 -24333493 - L1MC4 LINE L1 -432 7610 7447 834 213 6 38 chr2 228923110 228923281 -24333302 - AluJo SINE Alu -13 299 133 2325 107 0 0 chr2 228923281 228923579 -24333004 - AluSg SINE Alu -12 298 1 834 213 6 38 chr2 228923579 228923590 -24332993 - AluJo SINE Alu -179 133 123 3120 34 8 3 chr2 228923591 228923970 -24332613 - L1PA3 LINE L1 0 6155 5775 878 163 0 15 chr2 228923970 228924105 -24332478 - AluJo SINE Alu -169 133 1 2249 85 7 23 chr2 228924113 228924418 -24332165 - AluSq SINE Alu -8 305 6 21 0 0 0 chr2 228924947 228924968 -24331615 + AT_rich Low_complexity Low_complexity 1 21 0 415 301 34 11 chr2 228925095 228925271 -24331312 - HAL1b LINE L1 -838 510 331 2248 130 0 0 chr2 228925288 228925589 -24330994 - AluSx SINE Alu -11 301 1 1845 119 105 28 chr2 228925589 228925875 -24330708 - AluSx SINE Alu -4 308 1 707 155 0 0 chr2 228926218 228926321 -24330262 - U6 snRNA snRNA -4 103 1 1467 197 29 19 chr2 228926324 228926633 -24329950 - AluJo SINE Alu 0 312 1 866 200 17 34 chr2 228926635 228926810 -24329773 - FAM SINE Alu -3 172 1 631 248 35 35 chr2 228926842 228927044 -24329539 + L1ME3 LINE L1 5845 6046 -116 1779 153 7 4 chr2 228927058 228927332 -24329251 - AluSx SINE Alu 0 312 38 266 179 75 85 chr2 228927349 228927455 -24329128 + L1ME3 LINE L1 6041 6145 -17 1048 212 29 68 chr2 228927455 228927766 -24328817 - MLT1D LTR MaLR 0 505 207 239 0 32 0 chr2 228927797 228927828 -24328755 + (TTG)n Simple_repeat Simple_repeat 2 33 0 847 189 13 6 chr2 228927830 228927989 -24328594 - FRAM SINE Alu -16 160 1 906 160 22 17 chr2 228928002 228928183 -24328400 - MLT1D LTR MaLR -323 182 1 22 35 0 0 chr2 228928269 228928298 -24328285 + AT_rich Low_complexity Low_complexity 1 29 0 2203 120 0 3 chr2 228928461 228928770 -24327813 + AluSg SINE Alu 1 308 -2 190 194 0 0 chr2 228928937 228928968 -24327615 + L2 LINE L2 3224 3254 -18 366 261 52 37 chr2 228929015 228929149 -24327434 + MIR SINE MIR 127 262 0 252 0 0 0 chr2 228932403 228932431 -24324152 + (T)n Simple_repeat Simple_repeat 1 28 0 212 0 36 0 chr2 228933531 228933559 -24323024 + (CA)n Simple_repeat Simple_repeat 2 30 0 824 234 107 18 chr2 228934169 228934206 -24322377 + L1M4 LINE L1 2558 2590 -3556 2157 122 0 7 chr2 228934206 228934510 -24322073 - AluSq SINE Alu -11 302 1 824 234 107 18 chr2 228934510 228934810 -24321773 + L1M4 LINE L1 2590 2925 -3221 203 184 0 0 chr2 228934813 228934851 -24321732 + (TA)n Simple_repeat Simple_repeat 2 39 0 393 221 18 26 chr2 228934852 228934965 -24321618 - AluSg/x SINE Alu -15 285 174 23 0 0 0 chr2 228935277 228935300 -24321283 + AT_rich Low_complexity Low_complexity 1 23 0 1187 147 21 16 chr2 228935314 228935505 -24321078 - AluJo SINE Alu -30 282 91 25 0 0 0 chr2 228935508 228935533 -24321050 + AT_rich Low_complexity Low_complexity 1 25 0 397 278 136 28 chr2 228935546 228935819 -24320764 - L1ME LINE L1 -370 5751 5428 2031 123 14 3 chr2 228935819 228936111 -24320472 - AluSq SINE Alu -18 295 1 397 278 136 28 chr2 228936111 228936197 -24320386 - L1ME LINE L1 -693 5428 5353 1942 166 0 28 chr2 228936250 228936570 -24320013 + AluJb SINE Alu 2 312 0 1143 171 0 6 chr2 228936924 228937100 -24319483 - FAM SINE Alu 0 175 1 301 254 39 29 chr2 228938159 228938264 -24318319 + MIR3 SINE MIR 68 174 -34 836 285 18 11 chr2 228938264 228938548 -24318035 - AluSx SINE Alu -12 300 15 1407 187 11 8 chr2 228938958 228939226 -24317357 - AluSx SINE Alu -43 269 1 253 313 48 79 chr2 228939290 228939546 -24317037 + L2 LINE L2 2804 3051 -221 2180 106 7 3 chr2 228939546 228939838 -24316745 - AluSx SINE Alu -19 293 1 253 313 48 79 chr2 228939838 228939872 -24316711 + L2 LINE L2 3051 3085 -187 2344 76 3 3 chr2 228940366 228940668 -24315915 + AluSq SINE Alu 1 302 -11 407 305 19 34 chr2 228941008 228941181 -24315402 + MIR3 SINE MIR 3 171 -61 405 233 7 41 chr2 228942109 228942255 -24314328 + C-rich Low_complexity Low_complexity 5 145 0 2030 106 0 7 chr2 228942303 228942587 -24313996 + AluSq SINE Alu 22 303 -10 363 213 8 172 chr2 228942891 228943094 -24313489 + MIR3 SINE MIR 3 171 -61 1034 310 108 19 chr2 228943568 228944236 -24312347 - MERVL LTR ERVL -1164 4321 3595 529 325 29 36 chr2 228944261 228944541 -24312042 - MERVL LTR ERVL -2164 3490 3213 1123 228 81 72 chr2 228944684 228945140 -24311443 - MLT1H LTR MaLR -8 541 82 521 207 21 14 chr2 228945172 228945317 -24311266 - L1MB7 LINE L1 -1 6183 6038 503 253 7 7 chr2 228945562 228945708 -24310875 - LTR16A1 LTR ERVL 0 457 312 1230 128 6 6 chr2 228946275 228946455 -24310128 - AluSq SINE Alu 0 313 134 2360 89 3 0 chr2 228946455 228946748 -24309835 - AluY SINE Alu -17 294 1 2291 92 3 0 chr2 228946748 228947031 -24309552 - AluSp SINE Alu -29 284 1 1026 121 139 0 chr2 228947034 228947207 -24309376 - MSTA LTR MaLR -231 197 1 2409 98 0 3 chr2 228947583 228947889 -24308694 - AluY SINE Alu -6 305 1 803 164 8 30 chr2 228947914 228948048 -24308535 - FLAM_C SINE Alu -2 131 1 2449 81 0 3 chr2 228956368 228956666 -24299917 + AluSx SINE Alu 1 297 -15 2295 110 10 0 chr2 228957791 228958092 -24298491 + AluSx SINE Alu 1 304 -8 1224 119 6 0 chr2 228958254 228958422 -24298161 - AluSg/x SINE Alu -10 300 132 247 373 124 16 chr2 228958513 228958698 -24297885 + L3b LINE CR1 1292 1496 -87 323 253 116 0 chr2 228959795 228959890 -24296693 - MIR SINE MIR -71 137 32 453 276 83 26 chr2 228960167 228960323 -24296260 + MIR SINE MIR 71 235 -27 1770 135 52 0 chr2 228960859 228961126 -24295457 + AluJo SINE Alu 25 305 -7 2691 42 0 3 chr2 228961318 228961626 -24294957 + AluY SINE Alu 1 307 -4 203 333 143 19 chr2 228961645 228961750 -24294833 + MIR3 SINE MIR 6 123 -85 2145 109 7 3 chr2 228961795 228962102 -24294481 + AluJb SINE Alu 1 308 0 311 315 48 44 chr2 228962109 228962282 -24294301 - MIR SINE MIR -55 153 30 856 293 40 0 chr2 228963948 228964170 -24292413 + MIR SINE MIR 22 252 -10 680 307 38 5 chr2 228964998 228965210 -24291373 + MIR SINE MIR 2 220 -42 2167 122 6 10 chr2 228965493 228965804 -24290779 - AluSx SINE Alu -2 310 1 428 261 43 26 chr2 228965876 228965991 -24290592 - MIR SINE MIR 0 262 146 187 152 0 65 chr2 228966023 228966069 -24290514 + L2 LINE L2 3271 3313 0 2471 89 3 0 chr2 228966425 228966728 -24289855 - AluSp SINE Alu -9 304 1 1961 123 114 97 chr2 228967305 228967548 -24289035 - MSTA LTR MaLR 0 428 191 2258 88 0 7 chr2 228967548 228967854 -24288729 - AluY SINE Alu -7 304 1 2152 92 3 0 chr2 228967854 228968137 -24288446 - AluSp SINE Alu -29 284 1 1961 123 114 97 chr2 228968137 228968313 -24288270 - MSTA LTR MaLR -236 192 1 2260 98 0 3 chr2 228968689 228968995 -24287588 - AluY SINE Alu -6 305 1 785 164 8 30 chr2 228969020 228969154 -24287429 - FLAM_C SINE Alu -2 131 1 2072 125 3 0 chr2 228972034 228972331 -24284252 - AluSx SINE Alu -14 298 1 2199 157 39 107 chr2 228972369 228972440 -24284143 - L1MC4 LINE L1 -2 8040 7966 1330 187 100 55 chr2 228972440 228972819 -24283764 - MSTD LTR MaLR 0 396 1 2225 107 3 0 chr2 228972823 228973131 -24283452 - AluSq SINE Alu -4 309 1 2199 157 39 107 chr2 228973131 228973492 -24283091 - L1MC4 LINE L1 -79 7963 7579 234 0 0 0 chr2 228973492 228973518 -24283065 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1616 158 18 0 chr2 228973521 228973794 -24282789 - AluJb SINE Alu -34 278 1 2199 157 39 107 chr2 228973794 228973988 -24282595 - L1MC4 LINE L1 -465 7577 7447 852 202 6 49 chr2 228974006 228974179 -24282404 - AluJo SINE Alu -11 301 135 2179 107 0 0 chr2 228974179 228974477 -24282106 - AluSg SINE Alu -12 298 1 3325 19 3 0 chr2 228974489 228974866 -24281717 - L1PA3 LINE L1 0 6155 5778 860 163 0 15 chr2 228974868 228975003 -24281580 - AluJo SINE Alu -169 133 1 2300 78 3 13 chr2 228975011 228975319 -24281264 - AluSp SINE Alu -8 305 1 2147 99 7 3 chr2 228975319 228975623 -24280960 - AluSx SINE Alu -6 306 2 293 283 62 28 chr2 228975633 228975778 -24280805 - L1ME LINE L1 -302 5819 5670 232 286 39 0 chr2 228976269 228976346 -24280237 - MER113 DNA MER1_type? -200 321 242 1035 145 78 39 chr2 228976346 228976601 -24279982 - MER58 DNA MER1_type -1 2419 2155 328 297 34 7 chr2 228976697 228976845 -24279738 - L1MB7 LINE L1 -15 6169 6018 2134 92 0 14 chr2 228976850 228977143 -24279440 - AluSg1 SINE Alu -20 289 1 180 0 0 0 chr2 228977151 228977171 -24279412 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1672 158 0 37 chr2 228977175 228977473 -24279110 - AluJb SINE Alu -25 287 1 3016 167 35 15 chr2 228977487 228978444 -24278139 - L1MB7 LINE L1 -350 5834 4865 634 300 43 16 chr2 228978491 228978724 -24277859 + MIR SINE MIR 1 236 -26 413 242 40 73 chr2 228978739 228978780 -24277803 - MER58 DNA MER1_type -2297 123 82 2155 113 0 19 chr2 228978780 228979098 -24277485 + AluSq SINE Alu 1 312 -1 413 242 40 73 chr2 228979098 228979180 -24277403 - MER58 DNA MER1_type -2338 82 4 713 217 31 112 chr2 228979918 228980176 -24276407 - MER102a DNA MER1_type -6 324 88 218 323 65 0 chr2 228980251 228980344 -24276239 - MIR SINE MIR -132 130 32 186 43 0 0 chr2 228981135 228981158 -24275425 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 387 375 10 20 chr2 228981754 228981954 -24274629 - L2 LINE L2 -188 3084 2887 206 296 93 37 chr2 228982393 228982452 -24274131 - MER5A DNA MER1_type -72 117 63 1714 173 6 16 chr2 228982452 228982765 -24273818 - AluJb SINE Alu -2 310 1 206 296 93 37 chr2 228982765 228982813 -24273770 - MER5A DNA MER1_type -126 63 4 297 206 14 55 chr2 228983264 228983337 -24273246 + L2 LINE L2 3244 3313 0 210 286 0 0 chr2 228984299 228984362 -24272221 + GA-rich Low_complexity Low_complexity 2 64 0 2345 72 10 7 chr2 228986128 228986433 -24270150 - AluSp SINE Alu -7 306 1 2303 97 0 13 chr2 228986433 228986743 -24269840 - AluSx SINE Alu -6 306 1 2156 89 3 0 chr2 228986765 228987057 -24269526 - AluSg SINE Alu -7 303 11 736 230 160 5 chr2 228990593 228990806 -24265777 - MIR SINE MIR -14 248 3 2028 106 14 0 chr2 228990822 228991115 -24265468 - AluSp SINE Alu -5 308 12 975 163 18 0 chr2 228991117 228991283 -24265300 - AluSq SINE Alu -19 294 126 1951 101 3 37 chr2 228991283 228991614 -24264969 - AluY SINE Alu 0 311 1 279 79 0 0 chr2 228992714 228992752 -24263831 + (TG)n Simple_repeat Simple_repeat 2 39 0 237 273 96 48 chr2 228993206 228993331 -24263252 + MIR SINE MIR 75 210 -52 2181 254 75 30 chr2 228993451 228994368 -24262215 - L2 LINE L2 -4 3309 2328 1654 119 97 0 chr2 228994451 228994720 -24261863 - AluJb SINE Alu -17 295 1 2241 80 0 7 chr2 228995051 228995364 -24261219 - AluSx SINE Alu 0 311 1 300 328 38 15 chr2 228995411 228995542 -24261041 - L1MC5 LINE L1 -497 7464 7331 2115 73 0 4 chr2 228995857 228996130 -24260453 + AluSc SINE Alu 28 299 -10 276 235 24 24 chr2 228996447 228996532 -24260051 - L1MC5 LINE L1 -44 7917 7833 2037 128 7 0 chr2 228996596 228996892 -24259691 + AluSx SINE Alu 1 298 -14 1906 150 7 0 chr2 228996892 228997185 -24259398 + AluSx SINE Alu 1 295 -17 361 196 113 10 chr2 228997187 228997284 -24259299 - LTR48 LTR ERV1 -72 715 609 * 521 214 193 48 chr2 228997273 228997553 -24259030 - LTR48 LTR ERV1 -161 481 213 405 230 66 0 chr2 228997576 228997667 -24258916 - MER34 LTR ERV1 -452 95 1 845 158 70 19 chr2 228997793 228997951 -24258632 - FRAM SINE Alu 0 166 1 2522 158 47 0 chr2 228998005 228998429 -24258154 - MER72 LTR ERV1 0 722 279 1374 172 4 0 chr2 228998463 228998695 -24257888 + AluJo SINE Alu 80 312 0 471 236 36 27 chr2 228998778 228998888 -24257695 - MER72 LTR ERV1 -525 197 87 2215 128 78 236 chr2 228999028 228999487 -24257096 + Charlie1 DNA MER1_type 1712 1918 -843 2246 77 3 3 chr2 228999487 228999786 -24256797 + AluY SINE Alu 1 299 -12 2215 128 78 236 chr2 228999786 229000358 -24256225 + Charlie1 DNA MER1_type 1918 2579 -182 831 118 37 22 chr2 229000513 229000648 -24255935 + FLAM_C SINE Alu 1 137 -6 213 196 0 65 chr2 229001243 229001289 -24255294 + MIR SINE MIR 220 262 0 344 331 106 24 chr2 229001291 229001750 -24254833 + L2 LINE L2 2170 2756 -558 1522 149 4 15 chr2 229001837 229002099 -24254484 + AluJo SINE Alu 1 259 -53 1131 171 5 28 chr2 229002104 229002321 -24254262 - AluJo SINE Alu -100 212 1 541 187 30 8 chr2 229002322 229002456 -24254127 - Charlie2a DNA MER1_type -1954 908 772 264 235 31 31 chr2 229002550 229002648 -24253935 - Charlie2a DNA MER1_type -2517 345 248 2117 64 0 0 chr2 229002749 229003013 -24253570 - AluY SINE Alu -47 264 1 475 149 53 32 chr2 229003013 229003107 -24253476 - MER72 LTR ERV1 -626 96 1 566 239 58 67 chr2 229003123 229003180 -24253403 - L1MC5 LINE L1 -379 7582 7526 1757 136 52 7 chr2 229003180 229003466 -24253117 - AluSx SINE Alu -13 299 1 566 239 58 67 chr2 229003466 229003738 -24252845 - L1MC5 LINE L1 -435 7526 7256 1526 141 31 17 chr2 229004319 229004609 -24251974 + AluJo SINE Alu 1 294 -18 233 265 204 20 chr2 229005567 229005665 -24250918 - L2 LINE L2 -7 3265 3150 368 202 131 0 chr2 229006270 229006369 -24250214 + Charlie2 DNA MER1_type 1 112 -2670 2107 97 7 7 chr2 229006377 229006675 -24249908 - AluSx SINE Alu -14 298 1 895 122 34 7 chr2 229006734 229006882 -24249701 + AluSg/x SINE Alu 143 294 -18 207 0 0 0 chr2 229006883 229006906 -24249677 + (TA)n Simple_repeat Simple_repeat 2 24 0 680 322 13 32 chr2 229006909 229007313 -24249270 + HUERS-P3 LTR ERV1 3359 3763 -3993 971 188 9 56 chr2 229007451 229007562 -24249021 - Charlie1a DNA MER1_type -2558 203 105 1200 166 162 37 chr2 229007562 229007833 -24248750 - AluJb SINE Alu -7 305 1 971 188 9 56 chr2 229007833 229007934 -24248649 - Charlie1a DNA MER1_type -2656 105 1 2123 79 32 0 chr2 229008366 229008646 -24247937 - AluY SINE Alu -9 302 14 2295 94 3 0 chr2 229008939 229009248 -24247335 - AluSp SINE Alu -3 310 1 243 269 177 23 chr2 229010207 229010337 -24246246 - MER5A DNA MER1_type -24 165 16 3602 186 76 59 chr2 229011026 229011047 -24245536 + MER21B LTR ERV1 1 20 -843 1491 112 5 5 chr2 229011047 229011270 -24245313 + AluSg/x SINE Alu 83 305 -5 3602 186 76 59 chr2 229011270 229011806 -24244777 + MER21B LTR ERV1 20 545 -318 234 0 0 0 chr2 229011806 229011832 -24244751 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 580 185 74 0 chr2 229011832 229011940 -24244643 - FLAM_C SINE Alu -17 116 1 3602 186 76 59 chr2 229011940 229012194 -24244389 + MER21B LTR ERV1 544 828 -35 337 197 204 44 chr2 229012254 229012391 -24244192 - L2 LINE L2 0 3313 3155 791 152 0 30 chr2 229012412 229012544 -24244039 + FLAM_C SINE Alu 2 129 -4 1144 200 9 0 chr2 229012570 229012785 -24243798 + AluJo SINE Alu 1 217 -95 276 249 175 17 chr2 229012958 229013135 -24243448 - L2 LINE L2 -150 3163 2959 421 252 144 32 chr2 229013174 229013448 -24243135 - L2 LINE L2 -452 2862 2492 353 202 36 12 chr2 229014135 229014219 -24242364 - L1MC4 LINE L1 -554 7488 7403 * 1839 171 97 68 chr2 229014215 229014825 -24241758 + L1MC4 LINE L1 7377 8042 0 1534 122 4 8 chr2 229014993 229015239 -24241344 - L1MA4 LINE L1 -293 6007 5763 740 187 110 18 chr2 229015238 229015457 -24241126 - L1M1 LINE L1 -3983 2345 2107 * 1751 142 33 26 chr2 229015461 229015764 -24240819 - AluJo SINE Alu -3 309 5 1163 177 4 31 chr2 229015797 229016023 -24240560 - AluJo SINE Alu -19 293 74 5320 189 46 47 chr2 229016037 229016119 -24240464 - L1M1 LINE L1 -4065 1263 1182 2104 134 0 0 chr2 229016119 229016426 -24240157 - AluSx SINE Alu -5 307 1 5320 189 46 47 chr2 229016426 229017028 -24239555 - L1M1 LINE L1 -4146 1182 580 2031 126 0 10 chr2 229017028 229017337 -24239246 - AluSx SINE Alu -6 306 1 5320 189 46 47 chr2 229017337 229017371 -24239212 - L1M1 LINE L1 -4748 580 547 2026 124 3 16 chr2 229017371 229017677 -24238906 - AluSx SINE Alu -8 304 3 5320 189 46 47 chr2 229017677 229018064 -24238519 - L1M1 LINE L1 -4781 547 161 1868 84 4 36 chr2 229018064 229018338 -24238245 + AluY SINE Alu 38 302 -9 5320 189 46 47 chr2 229018338 229018658 -24237925 - L1M1 LINE L1 -5167 161 -158 3075 123 60 37 chr2 229018658 229019170 -24237413 - MER1A DNA MER1_type 0 527 4 5320 189 46 47 chr2 229019170 229019493 -24237090 - L1M1 LINE L1 -5486 4294967138 305 2118 106 0 29 chr2 229019493 229019805 -24236778 - AluSq SINE Alu -10 303 1 5320 189 46 47 chr2 229019805 229019866 -24236717 - L1M1 LINE L1 -5022 306 246 261 260 132 54 chr2 229020005 229020160 -24236423 - L1ME3A LINE L1 -248 5922 5746 1606 147 62 0 chr2 229020160 229020432 -24236151 - AluSx SINE Alu -22 290 2 261 260 132 54 chr2 229020432 229020480 -24236103 - L1ME3A LINE L1 -424 5746 5703 203 100 0 50 chr2 229020636 229020676 -24235907 + (TTC)n Simple_repeat Simple_repeat 2 39 0 668 160 118 0 chr2 229020678 229020797 -24235786 - FLAM_C SINE Alu 0 133 1 2134 113 3 0 chr2 229020799 229021100 -24235483 - AluSg SINE Alu -8 302 1 2163 103 10 0 chr2 229021104 229021405 -24235178 - AluSx SINE Alu -8 304 1 1092 160 19 5 chr2 229021439 229021645 -24234938 - AluJb SINE Alu -13 299 91 2107 101 13 7 chr2 229021800 229022098 -24234485 + AluSp SINE Alu 1 300 -13 220 210 48 16 chr2 229022267 229022329 -24234254 + MIR SINE MIR 42 105 -157 1986 117 31 0 chr2 229022345 229022636 -24233947 - AluSx SINE Alu -12 300 1 38712 78 16 9 chr2 229022704 229026867 -24229716 - L1PA6 LINE L1 0 6154 2022 2293 74 7 3 chr2 229026867 229027164 -24229419 - AluY SINE Alu -13 298 1 38712 78 16 9 chr2 229027164 229027692 -24228891 - L1PA6 LINE L1 -4132 2022 1499 2478 74 0 0 chr2 229027692 229028002 -24228581 - AluY SINE Alu -1 310 1 38712 78 16 9 chr2 229028002 229029414 -24227169 - L1PA6 LINE L1 -4655 1499 13 560 134 16 31 chr2 229029427 229029554 -24227029 + CT-rich Low_complexity Low_complexity 4 128 0 1876 142 30 3 chr2 229029554 229029856 -24226727 - AluSg SINE Alu 0 310 1 446 284 30 0 chr2 229029856 229029990 -24226593 + MIR SINE MIR 119 256 -6 242 216 0 20 chr2 229029994 229030045 -24226538 + CT-rich Low_complexity Low_complexity 3 52 0 420 150 0 0 chr2 229030277 229030357 -24226226 + (GA)n Simple_repeat Simple_repeat 1 80 0 1808 258 55 77 chr2 229030551 229031134 -24225449 - MER21B LTR ERV1 -154 709 143 2018 131 3 0 chr2 229031134 229031424 -24225159 - AluSg SINE Alu -19 291 1 1808 258 55 77 chr2 229031424 229031553 -24225030 - MER21B LTR ERV1 -720 143 13 2010 117 0 7 chr2 229031808 229032140 -24224443 - AluSx SINE Alu 0 312 1 273 270 204 16 chr2 229032269 229032432 -24224151 + MIR SINE MIR 16 200 -62 607 193 76 58 chr2 229032533 229032704 -24223879 + Charlie8 DNA MER1_type 47 220 -2197 938 105 0 56 chr2 229032834 229032977 -24223606 + AluSq/x SINE Alu 1 135 -178 1488 124 0 0 chr2 229032978 229033187 -24223396 + AluSq SINE Alu 1 209 -104 2832 110 162 8 chr2 229033201 229033675 -24222908 - LTR10A LTR ERV1 -62 547 1 348 135 19 0 chr2 229033720 229033772 -24222811 + AluSg/x SINE Alu 206 258 -44 1943 142 12 46 chr2 229034059 229034383 -24222200 - MER41E LTR ERV1 0 512 200 360 0 0 0 chr2 229034383 229034423 -24222160 + (T)n Simple_repeat Simple_repeat 1 40 0 1565 115 0 22 chr2 229034451 229034677 -24221906 - AluSg SINE Alu -86 224 4 357 214 24 0 chr2 229034688 229034772 -24221811 - L1MC4a LINE L1 -1877 5931 5846 2360 72 19 0 chr2 229034814 229035121 -24221462 - AluSp SINE Alu 0 313 1 2660 194 59 74 chr2 229035128 229035823 -24220760 - L1MDa LINE L1 -3107 3433 2767 2274 77 0 3 chr2 229035823 229036122 -24220461 - AluSq SINE Alu -15 298 1 2660 194 59 74 chr2 229036122 229036467 -24220116 - L1MDa LINE L1 -3773 2767 2418 1048 154 20 44 chr2 229036961 229037376 -24219207 - L1MDa LINE L1 -4078 2462 1834 1815 80 12 4 chr2 229037376 229037627 -24218956 + AluSg SINE Alu 1 253 -57 855 107 25 0 chr2 229037728 229037849 -24218734 - L1M3f LINE L1 -5204 124 1 1132 190 20 92 chr2 229037849 229038087 -24218496 - L1 LINE L1 -1724 4422 4168 1360 204 48 4 chr2 229038087 229038356 -24218227 - AluJb SINE Alu -31 281 1 1132 190 20 92 chr2 229038356 229038498 -24218085 - L1 LINE L1 -1978 4168 4017 1920 96 0 125 chr2 229038498 229038859 -24217724 + AluSg SINE Alu 1 300 0 1132 190 20 92 chr2 229038859 229038934 -24217649 - L1 LINE L1 -2129 4017 3338 837 212 31 21 chr2 229038934 229039127 -24217456 - L1MC4a LINE L1 -939 6869 3989 1555 185 3 26 chr2 229039135 229039438 -24217145 + AluJo SINE Alu 2 297 -15 2229 104 0 0 chr2 229039440 229039737 -24216846 + AluSx SINE Alu 1 297 -15 2146 84 205 8 chr2 229041523 229041879 -24214704 - MSTA LTR MaLR 0 428 3 531 313 111 5 chr2 229042393 229042601 -24213982 + MIR SINE MIR 15 244 -18 244 287 279 33 chr2 229042647 229042919 -24213664 - L2 LINE L2 -1 3271 2933 1455 178 16 43 chr2 229043591 229043895 -24212688 + AluJo SINE Alu 1 296 -16 2107 90 10 0 chr2 229043989 229044279 -24212304 - AluSg SINE Alu -17 293 1 1898 160 0 0 chr2 229044280 229044587 -24211996 - AluJb SINE Alu -5 307 1 1373 153 142 0 chr2 229045162 229045423 -24211160 - AluJb SINE Alu -12 300 3 1135 216 23 0 chr2 229047612 229047830 -24208753 + MER58A DNA MER1_type 1 223 -1 2000 141 3 0 chr2 229049104 229049410 -24207173 + AluSx SINE Alu 1 307 -5 1037 163 0 6 chr2 229049420 229049586 -24206997 + AluSx SINE Alu 1 165 -147 321 160 0 0 chr2 229049587 229049637 -24206946 - Alu SINE Alu -249 50 1 1435 168 20 49 chr2 229050278 229050582 -24206001 - AluJo SINE Alu -17 295 1 357 230 286 0 chr2 229050794 229050920 -24205663 - MIR3 SINE MIR -7 201 40 3527 134 58 43 chr2 229050970 229051154 -24205429 - L1MD1 LINE L1 0 6242 6062 1983 107 0 66 chr2 229051154 229051471 -24205112 + AluSq SINE Alu 2 297 -16 3527 134 58 43 chr2 229051471 229051979 -24204604 - L1MD1 LINE L1 -180 6062 5540 2273 99 3 0 chr2 229051979 229052291 -24204292 - AluSp SINE Alu 0 313 1 21 57 0 0 chr2 229052552 229052587 -24203996 + AT_rich Low_complexity Low_complexity 1 35 0 2128 121 3 0 chr2 229056684 229056990 -24199593 + AluSq SINE Alu 1 307 -6 2239 98 3 0 chr2 229057773 229058078 -24198505 - AluY SINE Alu -5 306 1 849 214 0 40 chr2 229058692 229058865 -24197718 + FAM SINE Alu 5 170 -5 204 367 0 0 chr2 229058963 229059023 -24197560 - L3 LINE CR1 -7 1570 1511 444 336 27 2 chr2 229059288 229059454 -24197129 - MIR SINE MIR -68 140 16 25 0 0 0 chr2 229059547 229059572 -24197011 + AT_rich Low_complexity Low_complexity 1 25 0 347 194 28 0 chr2 229059627 229059699 -24196884 - MIR SINE MIR -129 133 60 2332 89 3 3 chr2 229060205 229060518 -24196065 - AluSp SINE Alu 0 313 1 518 233 134 23 chr2 229065265 229065437 -24191146 + MIR SINE MIR 28 218 -44 822 238 226 9 chr2 229066919 229067268 -24189315 + L1ME1 LINE L1 5399 5823 -536 2096 91 3 7 chr2 229067272 229067570 -24189013 + AluSp SINE Alu 1 297 -16 913 121 0 7 chr2 229067581 229067722 -24188861 + FLAM_C SINE Alu 4 143 0 1057 210 153 5 chr2 229067722 229068031 -24188552 + L1ME1 LINE L1 5815 6162 0 2157 206 99 37 chr2 229068048 229068292 -24188291 + L1ME2 LINE L1 5402 5629 -535 2486 72 7 0 chr2 229068292 229068597 -24187986 + AluY SINE Alu 1 307 -4 2157 206 99 37 chr2 229068597 229069009 -24187574 + L1ME2 LINE L1 5629 6108 -56 1981 128 92 6 chr2 229069009 229069336 -24187247 - MLT1C LTR MaLR -93 374 20 2196 100 10 13 chr2 229069411 229069710 -24186873 + AluSq SINE Alu 1 298 -15 1643 171 39 0 chr2 229070113 229070394 -24186189 + AluJo SINE Alu 1 292 -20 180 0 0 0 chr2 229070437 229070457 -24186126 + (CCCTAA)n Simple_repeat Simple_repeat 2 21 0 2862 198 17 17 chr2 229070509 229071157 -24185426 - L1M4 LINE L1 -1213 5431 4784 523 278 94 33 chr2 229071349 229071594 -24184989 - L1M4 LINE L1 -6275 267 8 1404 201 135 65 chr2 229071611 229071684 -24184899 - L1ME3A LINE L1 -5 6165 6099 373 88 29 44 chr2 229071684 229071752 -24184831 - L1PA13 LINE L1 -18 6145 6079 1404 201 135 65 chr2 229071752 229071886 -24184697 - L1ME3A LINE L1 -71 6099 5976 1371 170 75 59 chr2 229071886 229072244 -24184339 - MLT1A1 LTR MaLR -1 364 1 1404 201 135 65 chr2 229072244 229072433 -24184150 - L1ME3A LINE L1 -194 5976 5727 1757 145 62 0 chr2 229072433 229072709 -24183874 - AluSx SINE Alu -18 294 2 1404 201 135 65 chr2 229072709 229072783 -24183800 - L1ME3A LINE L1 -443 5727 5660 662 160 118 0 chr2 229072913 229073073 -24183510 - FLAM_C SINE Alu 0 174 1 2258 113 3 0 chr2 229073075 229073376 -24183207 - AluSg SINE Alu -8 302 1 2287 103 10 0 chr2 229073380 229073681 -24182902 - AluSx SINE Alu -8 304 1 1317 140 14 5 chr2 229073715 229073922 -24182661 - AluJb SINE Alu -13 299 91 2323 95 14 0 chr2 229074077 229074373 -24182210 + AluSp SINE Alu 1 300 -13 197 210 48 16 chr2 229074542 229074604 -24181979 + MIR SINE MIR 42 105 -157 2109 117 31 0 chr2 229074620 229074911 -24181672 - AluSx SINE Alu -12 300 1 38830 78 16 9 chr2 229074979 229079142 -24177441 - L1PA6 LINE L1 0 6154 2022 2425 74 7 3 chr2 229079142 229079439 -24177144 - AluY SINE Alu -13 298 1 38830 78 16 9 chr2 229079439 229079967 -24176616 - L1PA6 LINE L1 -4132 2022 1499 2615 74 0 0 chr2 229079967 229080277 -24176306 - AluY SINE Alu -1 310 1 38830 78 16 9 chr2 229080277 229081689 -24174894 - L1PA6 LINE L1 -4655 1499 13 596 130 15 30 chr2 229081702 229081833 -24174750 + CT-rich Low_complexity Low_complexity 4 132 0 1987 142 30 3 chr2 229081833 229082135 -24174448 - AluSg SINE Alu 0 310 1 390 284 30 0 chr2 229082135 229082269 -24174314 + MIR SINE MIR 119 256 -6 242 216 0 20 chr2 229082273 229082324 -24174259 + CT-rich Low_complexity Low_complexity 3 52 0 420 150 0 0 chr2 229082556 229082636 -24173947 + (GA)n Simple_repeat Simple_repeat 1 80 0 1797 255 54 82 chr2 229082830 229083413 -24173170 - MER21B LTR ERV1 -154 709 148 2146 131 3 0 chr2 229083413 229083703 -24172880 - AluSg SINE Alu -19 291 1 1797 255 54 82 chr2 229083703 229083840 -24172743 - MER21B LTR ERV1 -715 148 9 2152 113 0 7 chr2 229084087 229084419 -24172164 - AluSx SINE Alu 0 312 1 220 276 204 16 chr2 229084548 229084711 -24171872 + MIR SINE MIR 16 200 -62 607 193 76 58 chr2 229084812 229084983 -24171600 + Charlie8 DNA MER1_type 58 231 -2186 997 105 0 56 chr2 229085113 229085256 -24171327 + AluSq/x SINE Alu 1 135 -177 1578 124 0 0 chr2 229085257 229085466 -24171117 + AluSq SINE Alu 1 209 -104 2826 110 162 8 chr2 229085480 229085954 -24170629 - LTR10A LTR ERV1 -62 547 1 344 135 19 0 chr2 229085999 229086051 -24170532 + AluSg/x SINE Alu 204 256 -44 3042 128 22 69 chr2 229086343 229086668 -24169915 - MER41E LTR ERV1 -4 508 216 1832 119 101 18 chr2 229086668 229086954 -24169629 - AluSg SINE Alu 0 310 1 3042 128 22 69 chr2 229086954 229087161 -24169422 - MER41E LTR ERV1 -296 216 1 1189 261 54 54 chr2 229087252 229087678 -24168905 - MER41E-int LTR ERV1 -5 6671 6243 2509 54 3 0 chr2 229087678 229087975 -24168608 - AluY SINE Alu -13 298 1 1189 261 54 54 chr2 229087975 229088085 -24168498 - MER41E-int LTR ERV1 -432 6244 6135 685 329 21 30 chr2 229088263 229088756 -24167827 - HUERS-P3 LTR ERV1 -3897 3927 3359 207 0 0 0 chr2 229088759 229088782 -24167801 + (TA)n Simple_repeat Simple_repeat 2 24 0 1063 101 34 7 chr2 229088783 229088931 -24167652 - AluSg/x SINE Alu -18 294 143 2073 119 4 0 chr2 229088990 229089267 -24167316 + AluSx SINE Alu 1 278 -34 279 255 80 43 chr2 229089314 229089527 -24167056 + L1MEd LINE L1 1248 1510 -4862 676 205 30 12 chr2 229089565 229089731 -24166852 + LTR37B LTR ERV1 298 466 -2 245 238 199 46 chr2 229089731 229089882 -24166701 + MER112 DNA MER1_type 81 254 -6 2447 105 0 0 chr2 229091274 229091587 -24164996 + AluSq SINE Alu 1 313 0 330 289 117 16 chr2 229091806 229091934 -24164649 - L2 LINE L2 -10 3303 3163 3468 112 89 7 chr2 229092540 229093127 -24163456 + LTR24C LTR ERV1 1 635 0 3791 106 19 2 chr2 229093195 229093713 -24162870 - MER1A DNA MER1_type 0 527 1 294 226 36 149 chr2 229094176 229094300 -24162283 - MLT1K LTR MaLR -43 545 443 691 185 0 39 chr2 229094300 229094430 -24162153 + FLAM_A SINE Alu 1 125 -8 294 226 36 149 chr2 229094430 229094473 -24162110 - MLT1K LTR MaLR -145 443 397 309 319 22 22 chr2 229094487 229094622 -24161961 - MLT1K LTR MaLR -346 242 108 1889 176 13 0 chr2 229095081 229095387 -24161196 - AluJb SINE Alu -2 310 1 187 286 66 11 chr2 229095433 229095524 -24161059 + L2 LINE L2 3149 3244 -28 973 240 70 17 chr2 229095819 229096162 -24160421 + MSTD LTR MaLR 1 396 0 1487 258 40 75 chr2 229096212 229096809 -24159774 - MLT1G LTR MaLR 0 590 15 570 218 69 11 chr2 229097384 229097565 -24159018 + L1MC4a LINE L1 5641 5819 -302 2559 128 10 20 chr2 229097602 229098009 -24158574 - MER57A LTR ERV1 0 403 1 991 116 27 0 chr2 229098009 229098155 -24158428 - MER57A-int LTR ERV1 0 7537 7388 247 163 41 0 chr2 229098155 229098204 -24158379 - LTR54B LTR ERV1 -214 284 234 392 130 0 0 chr2 229098206 229098260 -24158323 - MER57A-int LTR ERV1 -204 7333 7280 725 110 31 31 chr2 229098261 229098388 -24158195 - LTR54B LTR ERV1 -367 131 5 4284 89 37 5 chr2 229098390 229098986 -24157597 - MER57A-int LTR ERV1 -392 7145 6531 2459 68 0 13 chr2 229098988 229099297 -24157286 - AluY SINE Alu -6 305 1 1017 114 0 0 chr2 229099300 229099432 -24157151 - AluSq/x SINE Alu -180 132 1 13637 121 34 28 chr2 229099432 229100361 -24156222 - MER57A-int LTR ERV1 -999 6538 5616 189 0 0 0 chr2 229100361 229100382 -24156201 + (CA)n Simple_repeat Simple_repeat 2 22 0 13637 121 34 28 chr2 229100382 229101363 -24155220 - MER57A-int LTR ERV1 -1921 5616 4611 2299 123 0 0 chr2 229101363 229101672 -24154911 - AluSx SINE Alu -3 309 1 13637 121 34 28 chr2 229101672 229101987 -24154596 - MER57A-int LTR ERV1 -2926 4611 4299 1419 137 9 5 chr2 229102004 229102223 -24154360 - AluSg/x SINE Alu -5 305 86 1362 198 112 16 chr2 229102223 229102536 -24154047 - MER61A LTR ERV1 0 343 1 22942 75 27 16 chr2 229102536 229104608 -24151975 - MER61A-int LTR ERV1 0 5217 3170 2303 95 0 3 chr2 229104608 229104917 -24151666 + AluSx SINE Alu 2 309 0 22942 75 27 16 chr2 229104917 229105400 -24151183 - MER61A-int LTR ERV1 -2047 3170 2694 2137 112 3 17 chr2 229105400 229105696 -24150887 - AluSq SINE Alu -21 292 1 22942 75 27 16 chr2 229105696 229106308 -24150275 - MER61A-int LTR ERV1 -2523 2694 1961 2246 113 0 7 chr2 229106308 229106601 -24149982 - AluSx SINE Alu -21 291 1 22942 75 27 16 chr2 229106601 229106896 -24149687 - MER61A-int LTR ERV1 -3256 1961 1671 2073 137 0 0 chr2 229106897 229107210 -24149373 + AluSx SINE Alu 1 313 0 1039 234 10 5 chr2 229107215 229107424 -24149159 + MLT2D LTR ERVL 113 322 -92 3041 71 35 79 chr2 229107424 229107932 -24148651 + LTR21A LTR ERV1 1 486 -19 486 164 0 67 chr2 229107932 229108036 -24148547 + MLT2D LTR ERVL 318 414 0 1201 231 75 19 chr2 229108305 229108613 -24147970 - REP3 LTR ERV -181 381 57 186 43 0 0 chr2 229108722 229108745 -24147838 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 289 247 32 0 chr2 229108888 229108981 -24147602 - L1ME4a LINE L1 -12 6109 6014 559 261 129 34 chr2 229109085 229109465 -24147118 - L1ME4a LINE L1 -148 5973 5558 1485 129 0 18 chr2 229109516 229109733 -24146850 + AluSx SINE Alu 1 213 -99 445 202 9 28 chr2 229109834 229109943 -24146640 + AluSx SINE Alu 190 296 -14 4149 127 5 2 chr2 229109964 229110602 -24145981 + L1PA13 LINE L1 5524 6163 0 1944 137 0 49 chr2 229110604 229110932 -24145651 + AluJb SINE Alu 1 312 0 414 0 0 0 chr2 229111629 229111675 -24144908 + (TCTCCC)n Simple_repeat Simple_repeat 1 46 0 5479 79 33 54 chr2 229111675 229112625 -24143958 + SVA Other Other 57 868 -611 442 283 7 0 chr2 229112733 229112871 -24143712 + AluSg/x SINE Alu 150 288 -22 228 192 0 19 chr2 229113068 229113120 -24143463 + T-rich Low_complexity Low_complexity 2 52 0 347 348 6 28 chr2 229113213 229113391 -24143192 + MER91A DNA MER1_type 20 193 -3 1198 141 28 8 chr2 229113451 229113680 -24142903 + LTR10A LTR ERV1 319 549 -84 398 156 166 3 chr2 229114057 229114179 -24142404 - L1ME4a LINE L1 -683 5495 5376 4492 171 16 66 chr2 229114182 229114308 -24142275 - L1M4 LINE L1 -739 5435 5304 1940 143 0 45 chr2 229114308 229114616 -24141967 - AluSx SINE Alu -18 294 1 4492 171 16 66 chr2 229114616 229114792 -24141791 - L1M4 LINE L1 -870 5304 5121 2179 113 7 0 chr2 229114792 229115075 -24141508 - AluSc SINE Alu -20 289 5 2367 110 0 3 chr2 229115080 229115390 -24141193 - AluSx SINE Alu -3 309 1 4492 171 16 66 chr2 229115390 229116158 -24140425 - L1M4 LINE L1 -1057 5117 4398 1563 197 62 22 chr2 229116158 229116514 -24140069 - MLT1A2 LTR MaLR -4 370 1 4492 171 16 66 chr2 229116514 229116563 -24140020 - L1M4 LINE L1 -1776 4398 4348 215 329 32 63 chr2 229116698 229116856 -24139727 - L2 LINE L2 -4 3268 3116 198 279 49 0 chr2 229116904 229116965 -24139618 + L2 LINE L2 3189 3252 -61 275 267 199 0 chr2 229117536 229117682 -24138901 - HAL1b LINE L1 -237 1111 937 855 232 43 5 chr2 229117689 229117900 -24138683 + MER20 DNA MER1_type 1 219 0 838 231 65 5 chr2 229118009 229118225 -24138358 + MIR SINE MIR 13 241 -21 2369 88 0 13 chr2 229118308 229118615 -24137968 - AluSg SINE Alu -7 303 1 374 247 132 26 chr2 229118863 229118973 -24137610 - L1MC4a LINE L1 -1645 6163 6066 1669 174 31 7 chr2 229118973 229119266 -24137317 - AluJb SINE Alu -18 294 1 374 247 132 26 chr2 229119266 229119376 -24137207 - L1MC4a LINE L1 -1742 6066 5913 375 265 17 10 chr2 229119379 229119576 -24137007 - L1MC4a LINE L1 -343 5823 5527 189 0 0 0 chr2 229120358 229120379 -24136204 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 198 0 0 0 chr2 229120799 229120821 -24135762 + (T)n Simple_repeat Simple_repeat 1 22 0 343 127 0 0 chr2 229121315 229121370 -24135213 - MADE1 DNA Mariner 0 80 26 2221 91 0 0 chr2 229121370 229121655 -24134928 + AluSx SINE Alu 18 302 -10 22 70 0 0 chr2 229121926 229121969 -24134614 + AT_rich Low_complexity Low_complexity 1 43 0 25 0 0 0 chr2 229122196 229122221 -24134362 + AT_rich Low_complexity Low_complexity 1 25 0 1813 84 84 15 chr2 229122221 229122511 -24134072 + AluY SINE Alu 1 308 0 784 221 108 38 chr2 229123144 229123384 -24133199 - MIR SINE MIR -1 261 5 1924 136 7 23 chr2 229124776 229125086 -24131497 - AluSx SINE Alu -7 305 1 250 150 0 0 chr2 229126644 229126684 -24129899 + LTR67 LTR ERVL 1 40 -517 1742 151 10 23 chr2 229127494 229127798 -24128785 - AluJb SINE Alu -5 307 8 616 319 67 34 chr2 229127857 229128377 -24128206 + L2 LINE L2 2714 3263 -9 204 125 0 0 chr2 229128394 229128426 -24128157 + (GGGAA)n Simple_repeat Simple_repeat 1 32 0 1801 117 43 28 chr2 229128460 229128742 -24127841 + AluSg SINE Alu 21 306 -4 1840 136 28 60 chr2 229129116 229129454 -24127129 + L1MB7 LINE L1 5781 6106 -78 1679 182 7 3 chr2 229129454 229129756 -24126827 - AluSx SINE Alu -3 309 7 1840 136 28 60 chr2 229129756 229129814 -24126769 + L1MB7 LINE L1 6106 6164 -20 226 211 0 0 chr2 229130327 229130379 -24126204 - L1ME3A LINE L1 -10 6160 6109 2229 91 0 0 chr2 229130949 229131246 -24125337 - AluY SINE Alu -14 297 1 2239 83 0 7 chr2 229131246 229131544 -24125039 - AluSq SINE Alu -15 298 1 370 317 42 0 chr2 229132002 229132122 -24124461 - MER5B DNA MER1_type -48 130 6 651 294 74 52 chr2 229136035 229136446 -24120137 + L1MC5 LINE L1 7271 7671 -290 1885 118 0 4 chr2 229136446 229136709 -24119874 + AluSg SINE Alu 39 300 -10 1948 132 0 20 chr2 229136714 229137018 -24119565 + AluSx SINE Alu 1 298 -14 651 294 74 52 chr2 229137018 229137118 -24119465 + L1MC5 LINE L1 7674 7770 -191 2180 81 17 14 chr2 229137118 229137413 -24119170 - AluSc SINE Alu -13 296 1 651 294 74 52 chr2 229137413 229137629 -24118954 + L1MC5 LINE L1 7770 7929 -32 23 0 0 0 chr2 229137786 229137809 -24118774 + AT_rich Low_complexity Low_complexity 1 23 0 552 237 105 20 chr2 229137809 229137961 -24118622 - FRAM SINE Alu -1 165 1 430 288 0 8 chr2 229138015 229138133 -24118450 - MIR SINE MIR -56 206 90 2070 103 0 23 chr2 229140679 229140979 -24115604 - AluSg SINE Alu -17 293 1 288 127 268 0 chr2 229141068 229141139 -24115444 - MIR SINE MIR -115 147 58 580 268 22 0 chr2 229142364 229142502 -24114081 - MIR SINE MIR -59 203 63 236 246 7 0 chr2 229142795 229142933 -24113650 + (CA)n Simple_repeat Simple_repeat 2 140 0 636 181 86 0 chr2 229144857 229144973 -24111610 - FLAM_A SINE Alu -7 126 1 446 290 71 30 chr2 229145299 229145655 -24110928 + MLT1J LTR MaLR 101 511 0 614 305 57 12 chr2 229145699 229145945 -24110638 - MIR SINE MIR -1 261 5 225 0 0 0 chr2 229145994 229146019 -24110564 + (CAGG)n Simple_repeat Simple_repeat 2 26 0 1254 291 86 36 chr2 229146781 229147338 -24109245 + MLT1K LTR MaLR 2 586 -2 2090 108 0 7 chr2 229147366 229147689 -24108894 + AluSq SINE Alu 1 321 0 1826 134 0 7 chr2 229147823 229148132 -24108451 + AluJb SINE Alu 1 307 0 289 299 139 31 chr2 229148511 229148835 -24107748 + L1MEd LINE L1 23 381 -5738 940 305 71 38 chr2 229148840 229149822 -24106761 + L1MEd LINE L1 490 1556 -4754 35 24 0 0 chr2 229150015 229150057 -24106526 + AT_rich Low_complexity Low_complexity 1 42 0 493 183 9 9 chr2 229150559 229150674 -24105909 + CT-rich Low_complexity Low_complexity 1 115 0 348 279 48 0 chr2 229150936 229151040 -24105543 + MIR SINE MIR 68 176 -86 1478 236 70 70 chr2 229151043 229151546 -24105037 + L1ME3A LINE L1 5470 5975 -195 1951 133 0 17 chr2 229151546 229151846 -24104737 + AluSx SINE Alu 1 295 -17 1478 236 70 70 chr2 229151846 229151884 -24104699 + L1ME3A LINE L1 5974 6011 -159 909 197 29 109 chr2 229151939 229152254 -24104329 + L1MDa LINE L1 1336 1674 -4708 2189 86 10 3 chr2 229152254 229152556 -24104027 - AluSq SINE Alu -9 304 1 909 197 29 109 chr2 229152556 229152666 -24103917 + L1MDa LINE L1 1674 1791 -4591 3469 107 73 65 chr2 229152770 229154075 -24102508 + SVA Other Other 432 1140 -246 189 261 0 122 chr2 229154628 229154743 -24101840 - MIR SINE MIR -82 180 80 1162 37 0 0 chr2 229154744 229154879 -24101704 + AluSq/x SINE Alu 1 135 -178 1715 138 54 0 chr2 229154879 229155155 -24101428 + AluJb SINE Alu 1 291 -21 300 172 22 157 chr2 229155477 229155553 -24101030 + MER113 DNA MER1_type? 7 92 -429 2235 102 0 16 chr2 229155553 229155729 -24100854 - AluSx SINE Alu -2 310 133 324 0 0 0 chr2 229155729 229155765 -24100818 + (TG)n Simple_repeat Simple_repeat 2 37 0 1731 120 0 0 chr2 229155767 229156001 -24100582 - AluSq SINE Alu -29 284 51 2235 102 0 16 chr2 229156001 229156136 -24100447 - AluSx SINE Alu -180 132 1 1706 170 14 0 chr2 229156139 229156428 -24100155 - AluJo SINE Alu -19 293 1 300 172 22 157 chr2 229156428 229156481 -24100102 + MER113 DNA MER1_type? 94 122 -399 2035 117 10 0 chr2 229156638 229156936 -24099647 + AluSx SINE Alu 1 301 -11 322 293 129 0 chr2 229157034 229157150 -24099433 - MIR SINE MIR -78 184 54 2186 125 0 0 chr2 229157242 229157554 -24099029 + AluSx SINE Alu 1 312 0 865 242 214 28 chr2 229158107 229158467 -24098116 + LTR16A LTR ERVL 19 445 -5 1623 108 10 73 chr2 229158490 229158676 -24097907 - AluSx SINE Alu 0 312 149 2269 95 0 0 chr2 229158676 229158980 -24097603 - AluSc SINE Alu -5 304 1 1623 108 10 73 chr2 229158980 229159081 -24097502 - AluSx SINE Alu -163 149 43 1771 134 52 36 chr2 229159358 229159664 -24096919 - AluSx SINE Alu -1 311 1 946 312 157 18 chr2 229160490 229161211 -24095372 + L2 LINE L2 1938 2758 -556 369 326 21 87 chr2 229161573 229162144 -24094439 + L2 LINE L2 2741 3265 -7 244 233 0 41 chr2 229162929 229163002 -24093581 + GA-rich Low_complexity Low_complexity 1 70 0 339 25 0 0 chr2 229163512 229163552 -24093031 + (TG)n Simple_repeat Simple_repeat 1 40 0 201 372 0 0 chr2 229166160 229166254 -24090329 + C-rich Low_complexity Low_complexity 3 96 0 233 263 6 69 chr2 229166346 229166521 -24090062 + C-rich Low_complexity Low_complexity 4 167 0 21 0 0 0 chr2 229166610 229166631 -24089952 + GC_rich Low_complexity Low_complexity 1 21 0 315 308 140 0 chr2 229168097 229168240 -24088343 + MIR SINE MIR 84 246 -16 1740 109 0 115 chr2 229169047 229169377 -24087206 - AluSx SINE Alu 0 312 21 2038 140 3 0 chr2 229169412 229169719 -24086864 - AluSx SINE Alu -4 308 1 2057 128 0 3 chr2 229170284 229170588 -24085995 + AluSx SINE Alu 4 306 -6 181 257 19 124 chr2 229170638 229170743 -24085840 - L3 LINE CR1 -4 1573 1480 2148 113 3 25 chr2 229170962 229171281 -24085302 - AluSx SINE Alu 0 312 1 300 297 42 55 chr2 229172170 229172335 -24084248 - MIR3 SINE MIR -9 199 37 267 150 67 0 chr2 229173333 229173393 -24083190 - MIR SINE MIR -97 165 102 221 295 42 0 chr2 229173437 229173509 -24083074 - MIR SINE MIR -103 105 34 225 329 95 7 chr2 229176011 229176148 -24080435 - L3b LINE CR1 -149 1434 1286 2137 128 3 6 chr2 229176652 229176965 -24079618 + AluSx SINE Alu 1 312 0 267 260 30 40 chr2 229177067 229177167 -24079416 - MIR3 SINE MIR -12 196 98 30 83 0 0 chr2 229178300 229178372 -24078211 + GC_rich Low_complexity Low_complexity 1 72 0 263 319 134 43 chr2 229181431 229181555 -24075028 + MIR SINE MIR 9 120 -142 1164 230 106 91 chr2 229181555 229181885 -24074698 - MLT1H1 LTR MaLR 0 555 212 2470 70 0 6 chr2 229181885 229182198 -24074385 - AluY SINE Alu 0 311 1 1164 230 106 91 chr2 229182198 229182414 -24074169 - MLT1H1 LTR MaLR -343 212 1 263 319 134 43 chr2 229182414 229182521 -24074062 + MIR SINE MIR 120 261 -1 583 293 55 53 chr2 229182554 229182971 -24073612 - MLT1K LTR MaLR -2 586 169 210 169 169 31 chr2 229183889 229183954 -24072629 + MIR SINE MIR 74 147 -115 194 88 0 29 chr2 229184615 229184649 -24071934 + (GGCTG)n Simple_repeat Simple_repeat 4 36 0 222 140 35 35 chr2 229184818 229184875 -24071708 + (CTAGGG)n Simple_repeat Simple_repeat 1 57 0 265 305 65 39 chr2 229185244 229185398 -24071185 - MER5A DNA MER1_type 0 189 32 * 267 310 62 41 chr2 229185267 229185412 -24071171 + MER5A DNA MER1_type 36 183 -6 210 276 30 82 chr2 229186083 229186217 -24070366 - MIR SINE MIR -113 149 23 378 271 164 14 chr2 229186438 229186578 -24070005 + MIR3 SINE MIR 33 193 -15 261 0 0 0 chr2 229188250 229188279 -24068304 + (TG)n Simple_repeat Simple_repeat 2 30 0 261 0 0 0 chr2 229189105 229189134 -24067449 + (TG)n Simple_repeat Simple_repeat 2 30 0 207 0 0 0 chr2 229191099 229191122 -24065461 + (CCCCG)n Simple_repeat Simple_repeat 2 24 0 226 197 33 16 chr2 229191278 229191339 -24065244 + (CCCCG)n Simple_repeat Simple_repeat 1 62 0 24 67 0 0 chr2 229191452 229191497 -24065086 + GC_rich Low_complexity Low_complexity 1 45 0 679 269 95 33 chr2 229193434 229193676 -24062907 - MIR SINE MIR -5 257 1 203 146 0 91 chr2 229194027 229194082 -24062501 + (TCCCC)n Simple_repeat Simple_repeat 1 50 0 183 229 114 14 chr2 229194723 229194793 -24061790 + MIR SINE MIR 16 92 -116 305 387 30 20 chr2 229195153 229195352 -24061231 + L3b LINE CR1 1190 1390 -193 * 838 217 60 52 chr2 229195346 229195595 -24060988 - MIR SINE MIR 0 262 12 242 101 43 58 chr2 229195601 229195670 -24060913 + T-rich Low_complexity Low_complexity 1 68 0 207 0 0 0 chr2 229196484 229196507 -24060076 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 4859 63 2 0 chr2 229196507 229197111 -24059472 - L1PB1 LINE L1 -11 6140 5536 281 357 7 21 chr2 229197378 229197521 -24059062 + MIR3 SINE MIR 41 181 -27 339 210 136 0 chr2 229198065 229198146 -24058437 - L2 LINE L2 -8 3264 3173 353 300 0 0 chr2 229198273 229198353 -24058230 + MIR3 SINE MIR 127 206 -2 1002 251 12 21 chr2 229198568 229198811 -24057772 - MIR SINE MIR -2 260 20 477 0 0 0 chr2 229199870 229199923 -24056660 + (CA)n Simple_repeat Simple_repeat 1 53 0 22 99 0 0 chr2 229200512 229200583 -24056000 + GC_rich Low_complexity Low_complexity 1 71 0 218 293 17 0 chr2 229200933 229200991 -24055592 + L3 LINE CR1 1513 1571 -6 788 317 74 59 chr2 229201304 229202058 -24054525 - L2 LINE L2 -2 3311 2538 23 68 0 0 chr2 229204713 229204757 -24051826 + GC_rich Low_complexity Low_complexity 1 44 0 286 341 66 41 chr2 229206285 229206605 -24049978 + L1ME4a LINE L1 5737 6064 -57 1530 156 17 34 chr2 229206737 229207032 -24049551 - AluJb SINE Alu -22 290 1 252 164 16 0 chr2 229207517 229207578 -24049005 - L1MC4 LINE L1 0 8042 7981 1620 221 49 32 chr2 229207581 229207635 -24048948 - L1MC4 LINE L1 -145 7897 7845 2258 57 0 11 chr2 229207635 229207981 -24048602 - AluY SINE Alu 0 345 3 1620 221 49 32 chr2 229207981 229208392 -24048191 - L1MC4 LINE L1 -197 7845 7423 1197 222 81 65 chr2 229208381 229208773 -24047810 - L1MC4 LINE L1 -1022 7020 6617 * 620 36 12 0 chr2 229208773 229208856 -24047727 + (TCTA)n Simple_repeat Simple_repeat 4 87 0 1197 222 81 65 chr2 229208856 229208958 -24047625 - L1MC4 LINE L1 -1425 6617 6518 1762 158 3 7 chr2 229209212 229209519 -24047064 - AluJb SINE Alu 0 306 1 889 246 59 163 chr2 229209529 229209905 -24046678 + L2 LINE L2 2372 2753 -560 830 72 18 0 chr2 229209905 229210016 -24046567 + AluSc SINE Alu 121 233 -76 889 246 59 163 chr2 229210016 229210285 -24046298 + L2 LINE L2 2753 3048 -265 883 195 0 0 chr2 229210288 229210442 -24046141 + FRAM SINE Alu 9 162 -14 653 256 128 24 chr2 229210465 229210715 -24045868 + L2 LINE L2 3038 3313 0 2182 123 3 0 chr2 229210782 229211083 -24045500 - AluSx SINE Alu -10 302 1 1969 105 0 37 chr2 229211160 229211477 -24045106 - AluSx SINE Alu 0 306 1 417 224 82 0 chr2 229211521 229211619 -24044964 + L2 LINE L2 3208 3313 0 486 246 8 15 chr2 229211969 229212103 -24044480 - LTR67 LTR ERVL 0 557 425 226 291 126 10 chr2 229212327 229212430 -24044153 - LTR67 LTR ERVL -424 133 19 783 263 34 102 chr2 229212642 229212956 -24043627 + MLT1H1 LTR MaLR 63 397 -158 1904 135 4 4 chr2 229212956 229213237 -24043346 + AluSx SINE Alu 1 281 -31 216 0 0 0 chr2 229213241 229213265 -24043318 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 783 263 34 102 chr2 229213265 229213474 -24043109 + MLT1H1 LTR MaLR 400 555 0 594 289 62 55 chr2 229213577 229213833 -24042750 + MIR SINE MIR 3 260 -2 216 296 56 46 chr2 229213854 229213962 -24042621 + MIR SINE MIR 33 141 -121 309 250 36 0 chr2 229214574 229214658 -24041925 + L1ME3A LINE L1 5893 5979 -191 556 169 0 0 chr2 229214669 229214752 -24041831 + FRAM SINE Alu 67 149 -27 322 21 43 0 chr2 229214752 229214799 -24041784 + (TAAAA)n Simple_repeat Simple_repeat 2 50 0 558 239 80 5 chr2 229214799 229214987 -24041596 + L1ME3A LINE L1 5966 6167 -3 2162 83 28 0 chr2 229214989 229215278 -24041305 + AluY SINE Alu 3 299 -12 1987 120 0 26 chr2 229215405 229215714 -24040869 + AluSq SINE Alu 1 301 -12 379 250 243 7 chr2 229215871 229216015 -24040568 - MIR SINE MIR -12 250 73 526 313 88 5 chr2 229216156 229216348 -24040235 + MIR SINE MIR 33 240 -22 532 194 202 133 chr2 229217016 229217392 -24039191 + MER69 DNA AcHobo 14 415 -811 1390 214 123 8 chr2 229217464 229217959 -24038624 + MER69 DNA AcHobo 1975 2526 0 451 268 36 23 chr2 229217973 229218129 -24038454 - MIR3 SINE MIR -53 155 30 208 270 204 0 chr2 229218574 229218711 -24037872 + L2 LINE L2 1784 1948 -1366 1705 127 15 8 chr2 229218735 229219002 -24037581 - AluJb SINE Alu -43 269 1 427 231 29 10 chr2 229219194 229219298 -24037285 - L2 LINE L2 -20 3293 3188 195 42 0 0 chr2 229219327 229219351 -24037232 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3953 155 45 47 chr2 229219401 229219504 -24037079 - L1MB7 LINE L1 -1 6183 6081 2340 95 0 7 chr2 229219504 229219810 -24036773 + AluSx SINE Alu 1 304 -8 3953 155 45 47 chr2 229219810 229220395 -24036188 - L1MB7 LINE L1 -103 6081 5496 2311 152 76 61 chr2 229220395 229220855 -24035728 + MLT1C LTR MaLR 1 467 0 3953 155 45 47 chr2 229220855 229221149 -24035434 - L1MB7 LINE L1 -688 5496 5201 1776 151 16 32 chr2 229221149 229221462 -24035121 - AluJo SINE Alu -6 306 1 3953 155 45 47 chr2 229221462 229221571 -24035012 - L1MB7 LINE L1 -983 5201 5093 185 188 0 0 chr2 229221591 229221623 -24034960 + L2 LINE L2 3017 3048 -224 483 204 44 66 chr2 229221687 229221824 -24034759 + L2 LINE L2 3139 3272 0 664 302 96 47 chr2 229221838 229221871 -24034712 + L2 LINE L2 1969 1999 -1315 2391 100 0 3 chr2 229221871 229222180 -24034403 - AluSx SINE Alu -4 308 1 664 302 96 47 chr2 229222180 229222530 -24034053 + L2 LINE L2 1999 2371 -943 594 217 16 0 chr2 229222665 229222794 -24033789 + L1ME LINE L1 5589 5719 -451 3362 193 78 86 chr2 229222953 229223225 -24033358 - L1MEc LINE L1 -2737 3478 3205 2003 140 3 10 chr2 229223225 229223517 -24033066 + AluSx SINE Alu 11 300 -12 3362 193 78 86 chr2 229223517 229223553 -24033030 - L1MEc LINE L1 -3010 3205 3170 708 120 30 0 chr2 229223553 229223653 -24032930 - U6 snRNA snRNA -3 104 2 3362 193 78 86 chr2 229223653 229223823 -24032760 - L1MEc LINE L1 -3045 3170 3000 2101 108 17 3 chr2 229223823 229224111 -24032472 - AluSx SINE Alu -20 292 1 3362 193 78 86 chr2 229224111 229225113 -24031470 - L1MEc LINE L1 -3215 3000 2096 1714 186 10 0 chr2 229225113 229225403 -24031180 - AluJo SINE Alu -19 293 1 3362 193 78 86 chr2 229225403 229225477 -24031106 - L1MEc LINE L1 -4119 2096 2023 1666 214 57 0 chr2 229225475 229225914 -24030669 - L1MEc LINE L1 -5263 1133 670 * 688 206 121 20 chr2 229225914 229226162 -24030421 + L1M4 LINE L1 2731 3003 -3143 872 226 66 109 chr2 229226183 229226619 -24029964 - L1MEc LINE L1 -3425 2790 2337 804 83 15 15 chr2 229226619 229226751 -24029832 + (TTTC)n Simple_repeat Simple_repeat 2 133 0 872 226 66 109 chr2 229226751 229226814 -24029769 - L1MEc LINE L1 -3878 2337 2273 2144 119 17 0 chr2 229226814 229227107 -24029476 - AluSx SINE Alu -14 298 1 872 226 66 109 chr2 229227107 229227564 -24029019 - L1MEc LINE L1 -3942 2273 1925 779 186 0 0 chr2 229227567 229227696 -24028887 - FLAM_A SINE Alu -4 129 1 278 115 19 0 chr2 229228222 229228274 -24028309 + CT-rich Low_complexity Low_complexity 2 54 0 2505 63 7 0 chr2 229228515 229228817 -24027766 - AluY SINE Alu -7 304 1 383 204 21 54 chr2 229228859 229228952 -24027631 - L1MC4 LINE L1 -1339 6703 6614 312 235 10 92 chr2 229228865 229228963 -24027620 + L1MC4 LINE L1 6614 6703 -1339 * 2587 139 31 10 chr2 229229159 229229576 -24027007 + MSTB LTR MaLR 1 426 0 1642 165 187 11 chr2 229229826 229230190 -24026393 - MSTA LTR MaLR 0 428 1 9440 121 18 44 chr2 229230190 229230501 -24026082 - MSTA-int LTR MaLR 0 1580 1262 2135 134 3 3 chr2 229230501 229230806 -24025777 - AluSx SINE Alu -7 305 1 9440 121 18 44 chr2 229230806 229232087 -24024496 - MSTA-int LTR MaLR -318 1262 30 2005 147 131 11 chr2 229232104 229232486 -24024097 - MSTA LTR MaLR 0 428 1 243 79 0 0 chr2 229232614 229232652 -24023931 + (ATG)n Simple_repeat Simple_repeat 1 38 0 622 242 5 81 chr2 229232657 229232843 -24023740 - MIR SINE MIR -19 243 72 430 162 0 14 chr2 229232976 229233050 -24023533 - MIR SINE MIR 0 262 190 243 0 0 0 chr2 229233150 229233177 -24023406 + (A)n Simple_repeat Simple_repeat 1 27 0 335 288 0 0 chr2 229233216 229233289 -24023294 - L2 LINE L2 -3 3310 3238 445 275 84 87 chr2 229233448 229233783 -24022800 - L2 LINE L2 -5 3267 2934 1209 264 41 5 chr2 229234048 229234415 -24022168 + L1MC4a LINE L1 5527 5906 -1902 411 256 70 26 chr2 229234422 229234578 -24022005 + MLT1L LTR MaLR 442 604 -11 967 314 79 17 chr2 229235105 229235576 -24021007 - L2 LINE L2 -1 3312 2813 1021 233 127 58 chr2 229235635 229236052 -24020531 + MLT1J LTR MaLR 1 446 -65 226 295 32 42 chr2 229236061 229236156 -24020427 - L2 LINE L2 -661 2653 2560 304 304 35 35 chr2 229236189 229236304 -24020279 + MIR SINE MIR 11 125 -137 776 193 10 107 chr2 229236352 229236549 -24020034 + MLT2D LTR ERVL 235 412 -2 291 216 45 11 chr2 229236555 229236643 -24019940 - L1ME3A LINE L1 -3 6167 6077 1588 188 55 7 chr2 229236729 229237022 -24019561 + AluJo SINE Alu 1 307 -5 2444 88 0 0 chr2 229237051 229237347 -24019236 + AluSc SINE Alu 4 299 -10 1681 191 48 112 chr2 229237639 229238127 -24018456 - MLT2B3 LTR ERVL 0 544 112 6758 68 16 29 chr2 229238127 229240011 -24016572 + SVA Other Other 1 1386 0 1681 191 48 112 chr2 229240011 229240117 -24016466 - MLT2B3 LTR ERVL -432 112 1 891 258 88 111 chr2 229240191 229240527 -24016056 + MLT1F1 LTR MaLR 255 591 -2 2094 244 68 66 chr2 229240533 229241071 -24015512 - L1ME LINE L1 -422 5748 5213 2288 122 0 3 chr2 229241071 229241382 -24015201 - AluSx SINE Alu -2 310 1 2094 244 68 66 chr2 229241382 229241481 -24015102 - L1ME LINE L1 -957 5213 5116 2097 101 14 27 chr2 229241481 229241803 -24014780 - AluSx SINE Alu 0 312 1 2094 244 68 66 chr2 229241803 229241991 -24014592 - L1ME LINE L1 -1054 5116 4930 1909 93 104 0 chr2 229241991 229242294 -24014289 - AluSq SINE Alu 0 330 1 2094 244 68 66 chr2 229242294 229242580 -24014003 - L1ME LINE L1 -1240 4930 4646 2106 134 0 38 chr2 229242580 229242900 -24013683 - AluSx SINE Alu -4 308 1 2094 244 68 66 chr2 229242900 229243375 -24013208 - L1ME LINE L1 -1524 4646 4156 2293 199 92 46 chr2 229243777 229243846 -24012737 + L1MC4 LINE L1 6469 6533 -1509 1768 160 17 27 chr2 229243846 229244140 -24012443 + AluJb SINE Alu 1 291 -21 2293 199 92 46 chr2 229244140 229244654 -24011929 + L1MC4 LINE L1 6533 7079 -963 447 187 75 41 chr2 229244643 229244794 -24011789 + L1MD3 LINE L1 7226 7494 -501 * 608 210 18 30 chr2 229244783 229244950 -24011633 + L1MC4a LINE L1 7541 7705 -103 925 179 14 27 chr2 229244966 229245247 -24011336 + MLT1A1 LTR MaLR 1 363 -2 2201 250 85 48 chr2 229245556 229245790 -24010793 - MER69B DNA AcHobo -1313 1213 989 1707 185 3 17 chr2 229245790 229246092 -24010491 - AluJb SINE Alu -11 301 4 2201 250 85 48 chr2 229246092 229246740 -24009843 - MER69B DNA AcHobo -1537 989 298 1422 213 54 61 chr2 229246740 229247200 -24009383 + MLT1C LTR MaLR 4 460 -7 877 272 61 7 chr2 229247196 229247490 -24009093 - MER69B DNA AcHobo -914 312 3 * 774 294 10 15 chr2 229247502 229247706 -24008877 + MIR SINE MIR 8 210 -52 567 29 0 0 chr2 229247722 229247791 -24008792 + (TCTA)n Simple_repeat Simple_repeat 4 72 0 5086 161 35 37 chr2 229247867 229248351 -24008232 - L1PA15 LINE L1 -186 5979 5495 1618 176 64 20 chr2 229248351 229248647 -24007936 - AluJb SINE Alu -1 311 3 5086 161 35 37 chr2 229248647 229250052 -24006531 - L1PA15 LINE L1 -670 5495 4106 404 327 32 13 chr2 229250054 229250210 -24006373 + L1MC4 LINE L1 7883 8041 -1 1923 154 7 10 chr2 229250267 229250559 -24006024 + AluJo SINE Alu 1 291 -21 410 273 62 25 chr2 229250656 229250817 -24005766 - L2 LINE L2 -337 2976 2810 1743 210 77 66 chr2 229250825 229251265 -24005318 - MLT1H1 LTR MaLR 0 555 106 766 154 8 0 chr2 229251265 229251382 -24005201 - FLAM_C SINE Alu -15 118 1 1743 210 77 66 chr2 229251382 229251488 -24005095 - MLT1H1 LTR MaLR -449 106 3 1937 232 29 0 chr2 229251489 229251907 -24004676 - L2 LINE L2 -507 2807 2378 30 27 0 0 chr2 229252853 229252890 -24003693 + GC_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr2 229254585 229254607 -24001976 + GC_rich Low_complexity Low_complexity 1 22 0 49 66 0 0 chr2 229256213 229256304 -24000279 + GC_rich Low_complexity Low_complexity 1 91 0 239 265 26 26 chr2 229256532 229256649 -23999934 + (CCCCG)n Simple_repeat Simple_repeat 1 117 0 404 303 157 0 chr2 229257542 229257720 -23998863 - MIR SINE MIR -42 220 15 277 299 31 0 chr2 229257824 229257921 -23998662 - MIR3 SINE MIR -6 202 103 685 309 89 37 chr2 229258181 229258563 -23998020 - L3b LINE CR1 -61 1522 1121 315 292 221 10 chr2 229258786 229258981 -23997602 - MIR SINE MIR -7 255 20 1302 179 106 62 chr2 229259600 229259958 -23996625 - MLT1A2 LTR MaLR 0 374 1 426 283 125 12 chr2 229259961 229260183 -23996400 - L2 LINE L2 -256 3057 2785 35 78 0 0 chr2 229260195 229260272 -23996311 + AT_rich Low_complexity Low_complexity 1 77 0 307 127 394 0 chr2 229260286 229260357 -23996226 + L2 LINE L2 3203 3301 -12 952 256 48 62 chr2 229260362 229260485 -23996098 + L1ME3A LINE L1 5406 5529 -641 2207 102 0 37 chr2 229260485 229260809 -23995774 + AluSx SINE Alu 1 312 0 952 256 48 62 chr2 229260809 229261211 -23995372 + L1ME3A LINE L1 5529 5931 -239 1743 159 10 17 chr2 229261221 229261516 -23995067 + AluJo SINE Alu 1 293 -19 2142 142 0 0 chr2 229261518 229261829 -23994754 + AluSx SINE Alu 1 311 -1 361 162 102 52 chr2 229261864 229262007 -23994576 + MLT1E2 LTR MaLR 2 170 -454 1348 262 94 47 chr2 229262930 229263480 -23993103 - MLT1K LTR MaLR -3 585 10 2314 94 10 0 chr2 229263598 229263896 -23992687 + AluSp SINE Alu 1 301 -12 290 304 11 11 chr2 229263896 229263988 -23992595 - MER5B DNA MER1_type -83 95 4 2273 106 0 3 chr2 229264460 229264762 -23991821 + AluSp SINE Alu 1 301 -12 259 287 23 11 chr2 229266582 229266669 -23989914 - MIR SINE MIR -147 115 28 1816 144 54 0 chr2 229266786 229267064 -23989519 + AluJb SINE Alu 1 293 -19 211 190 52 69 chr2 229268839 229268897 -23987686 - MIR3 SINE MIR -6 202 146 477 236 73 0 chr2 229268959 229269082 -23987501 - MIR SINE MIR -57 151 20 183 274 74 53 chr2 229269336 229269431 -23987152 - L2 LINE L2 -44 3269 3173 22 80 0 0 chr2 229272215 229272265 -23984318 + GC_rich Low_complexity Low_complexity 1 50 0 25 65 0 0 chr2 229272275 229272321 -23984262 + GC_rich Low_complexity Low_complexity 1 46 0 28 61 0 0 chr2 229273318 229273367 -23983216 + GC_rich Low_complexity Low_complexity 1 49 0 254 164 18 0 chr2 229273806 229273861 -23982722 + CT-rich Low_complexity Low_complexity 2 57 0 2057 114 7 23 chr2 229277388 229277695 -23978888 + AluSx SINE Alu 1 302 -10 2126 115 0 0 chr2 229277798 229278127 -23978456 + AluSx SINE Alu 1 329 0 945 199 0 0 chr2 229278127 229278293 -23978290 + AluJo/FRAM SINE Alu 134 299 -13 2075 96 10 22 chr2 229278672 229278986 -23977597 + AluY SINE Alu 1 310 -1 216 0 0 0 chr2 229278986 229279010 -23977573 + (TA)n Simple_repeat Simple_repeat 1 24 0 1108 136 40 6 chr2 229279027 229279204 -23977379 + AluSg/x SINE Alu 123 305 -5 660 308 149 12 chr2 229279210 229279625 -23976958 + L1ME LINE L1 5352 5823 -298 2221 72 7 3 chr2 229279631 229279923 -23976660 + AluSc SINE Alu 1 293 -16 1746 135 35 7 chr2 229279935 229280217 -23976366 + AluSx SINE Alu 3 292 -20 365 188 12 0 chr2 229280515 229280600 -23975983 + GA-rich Low_complexity Low_complexity 1 86 0 241 154 0 0 chr2 229281037 229281076 -23975507 + L2 LINE L2 3257 3295 -18 2431 60 0 10 chr2 229281304 229281618 -23974965 - AluY SINE Alu 0 311 1 981 282 118 37 chr2 229281709 229282002 -23974581 - L1M4 LINE L1 -1112 5034 4766 2098 136 7 0 chr2 229282002 229282312 -23974271 - AluSx SINE Alu 0 312 1 981 282 118 37 chr2 229282312 229282884 -23973699 - L1M4 LINE L1 -1380 4766 4099 287 307 86 43 chr2 229283242 229283382 -23973201 + MIR SINE MIR 29 176 -32 217 242 221 21 chr2 229283983 229284078 -23972505 + MIR SINE MIR 55 168 -94 297 103 77 0 chr2 229284078 229284195 -23972388 + (TA)n Simple_repeat Simple_repeat 1 126 0 303 323 66 55 chr2 229284279 229284644 -23971939 + L1M4c LINE L1 1811 2179 -4205 289 203 34 25 chr2 229284648 229284766 -23971817 + (TATAA)n Simple_repeat Simple_repeat 1 119 0 2094 105 0 0 chr2 229284768 229285044 -23971539 - AluSx SINE Alu -24 288 13 332 329 106 0 chr2 229285731 229285892 -23970691 - MIR SINE MIR -79 183 6 799 233 70 19 chr2 229286120 229286335 -23970248 + MIR SINE MIR 37 262 0 693 245 48 21 chr2 229286379 229286567 -23970016 + MIR SINE MIR 12 204 -58 332 291 16 16 chr2 229286620 229286747 -23969836 - MIR SINE MIR -71 191 65 721 233 61 0 chr2 229287071 229287251 -23969332 - MIR SINE MIR -71 191 1 1983 123 33 0 chr2 229287341 229287643 -23968940 + AluSx SINE Alu 1 312 0 1394 227 0 25 chr2 229287664 229287981 -23968602 + AluJo SINE Alu 3 311 -1 395 295 54 27 chr2 229288448 229288597 -23967986 + MIR SINE MIR 98 250 -12 446 308 14 7 chr2 229289710 229289853 -23966730 - MIR3 SINE MIR -35 173 30 683 337 128 43 chr2 229290085 229290677 -23965906 - L3 LINE CR1 -113 1464 800 2028 119 20 0 chr2 229290677 229291006 -23965577 + AluSx SINE Alu 1 312 0 683 337 128 43 chr2 229291006 229291126 -23965457 - L3 LINE CR1 -777 800 692 1641 161 0 35 chr2 229291342 229291652 -23964931 + AluJb SINE Alu 1 299 -13 1858 139 17 0 chr2 229291861 229292155 -23964428 - AluSx SINE Alu -13 299 1 653 195 8 0 chr2 229292218 229292336 -23964247 - L2 LINE L2 -2 3311 3193 324 237 217 53 chr2 229292453 229292521 -23964062 - LTR33A LTR ERVL 0 523 468 2210 103 0 7 chr2 229292521 229292831 -23963752 + AluSg SINE Alu 1 308 -2 324 237 217 53 chr2 229292831 229292914 -23963669 - LTR33A LTR ERVL -55 468 347 604 217 39 8 chr2 229292944 229293073 -23963510 - LTR33A LTR ERVL -264 259 127 256 203 17 17 chr2 229293505 229293564 -23963019 - L2 LINE L2 -62 3251 3193 182 105 53 35 chr2 229293716 229293773 -23962810 + (CCCTG)n Simple_repeat Simple_repeat 1 58 0 1551 155 29 0 chr2 229294961 229295270 -23961313 - MER33 DNA MER1_type -2 322 5 685 120 0 0 chr2 229295425 229295557 -23961026 - AluSg/x SINE Alu 0 321 190 267 241 265 0 chr2 229295853 229295936 -23960647 - L2 LINE L2 -1 3312 3208 291 340 31 0 chr2 229296260 229296357 -23960226 + MIR SINE MIR 92 191 -71 188 33 0 33 chr2 229296492 229296522 -23960061 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1836 154 0 13 chr2 229298543 229298841 -23957742 + AluSg SINE Alu 1 294 -16 635 259 132 15 chr2 229299094 229299299 -23957284 + MIR SINE MIR 20 248 -14 555 16 0 0 chr2 229299315 229299379 -23957204 + (CA)n Simple_repeat Simple_repeat 1 64 0 2663 55 3 17 chr2 229299744 229300126 -23956457 + L1PA6 LINE L1 5810 6154 0 2429 52 0 52 chr2 229300492 229300820 -23955763 - AluY SINE Alu 0 311 1 358 368 0 0 chr2 229300942 229301067 -23955516 + MIR SINE MIR 25 149 -113 462 335 51 20 chr2 229301688 229301942 -23954641 + MIR SINE MIR 1 262 0 1620 123 0 117 chr2 229302145 229302495 -23954088 - AluJb SINE Alu 0 312 4 1757 217 106 21 chr2 229302501 229303022 -23953561 - L1MD3 LINE L1 -27 7968 7404 1025 225 113 37 chr2 229303811 229304249 -23952334 - MLT1F LTR MaLR 0 542 12 339 369 59 5 chr2 229304429 229304616 -23951967 + MIR SINE MIR 58 254 -8 238 294 0 0 chr2 229304622 229304690 -23951893 + MIR SINE MIR 86 153 -109 353 295 27 0 chr2 229305523 229305635 -23950948 + MER91A DNA MER1_type 1 115 -81 229 286 14 14 chr2 229305730 229305800 -23950783 + MER91A DNA MER1_type 121 190 0 1963 116 7 11 chr2 229307156 229307467 -23949116 + AluSx SINE Alu 1 310 0 765 288 28 12 chr2 229308238 229308488 -23948095 + MIR SINE MIR 8 261 -1 226 225 135 56 chr2 229308665 229308754 -23947829 + MER63 DNA MER1_type 21 742 -320 316 264 124 67 chr2 229308915 229309017 -23947566 + MER5A DNA MER1_type 1 119 -70 2171 98 3 10 chr2 229309017 229309322 -23947261 + AluY SINE Alu 1 303 -8 316 264 124 67 chr2 229309322 229309397 -23947186 + MER5A DNA MER1_type 119 188 -1 23 33 0 0 chr2 229312794 229312824 -23943759 + GC_rich Low_complexity Low_complexity 1 30 0 222 37 0 0 chr2 229314367 229314394 -23942189 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2199 61 4 0 chr2 229314395 229314673 -23941910 - AluY SINE Alu -32 279 1 239 260 33 40 chr2 229315605 229315789 -23940794 + (AGGTG)n Simple_repeat Simple_repeat 1 182 0 261 107 27 87 chr2 229315807 229315956 -23940627 + (GGGTG)n Simple_repeat Simple_repeat 1 140 0 216 97 0 0 chr2 229316910 229316941 -23939642 + (CGG)n Simple_repeat Simple_repeat 3 33 0 216 111 0 0 chr2 229317074 229317110 -23939473 + (CGG)n Simple_repeat Simple_repeat 2 37 0 426 291 14 0 chr2 229317709 229317850 -23938733 - MER91A DNA MER1_type -53 143 1 26 0 0 0 chr2 229320458 229320484 -23936099 + GC_rich Low_complexity Low_complexity 1 26 0 276 312 0 48 chr2 229321131 229321256 -23935327 + C-rich Low_complexity Low_complexity 1 119 0 673 231 29 95 chr2 229322789 229322926 -23933657 + MIR SINE MIR 28 144 -118 2017 125 10 0 chr2 229322926 229323229 -23933354 + AluSx SINE Alu 7 312 0 673 231 29 95 chr2 229323229 229323333 -23933250 + MIR SINE MIR 144 253 -9 233 328 109 17 chr2 229323464 229323583 -23933000 + MIR3 SINE MIR 25 154 -54 249 257 10 79 chr2 229323775 229323876 -23932707 - MIR SINE MIR -56 206 113 259 319 274 0 chr2 229324639 229324774 -23931809 + MER91A DNA MER1_type 25 196 0 2107 136 0 0 chr2 229324845 229325154 -23931429 - AluSc SINE Alu 0 309 1 332 232 30 30 chr2 229326862 229326961 -23929622 + MIR SINE MIR 85 183 -79 439 329 111 69 chr2 229328417 229329017 -23927566 + HAL1 LINE L1 875 1465 -1042 332 232 30 30 chr2 229329517 229329616 -23926967 + MIR SINE MIR 85 183 -79 29 0 0 0 chr2 229330950 229330979 -23925604 + GC_rich Low_complexity Low_complexity 1 29 0 418 341 17 12 chr2 229332074 229332247 -23924336 - MIR SINE MIR -17 245 72 1902 121 0 4 chr2 229332254 229332527 -23924056 + AluJb SINE Alu 1 272 -40 180 0 0 0 chr2 229332542 229332562 -23924021 + (TGGGGG)n Simple_repeat Simple_repeat 5 24 0 405 331 89 0 chr2 229332821 229332990 -23923593 - MIR SINE MIR -57 205 22 754 251 189 47 chr2 229333067 229333449 -23923134 + L2 LINE L2 2877 3312 -1 229 281 16 0 chr2 229336100 229336164 -23920419 - L2 LINE L2 0 3313 3249 192 185 261 0 chr2 229336295 229336360 -23920223 + MIR SINE MIR 170 251 -11 199 303 166 0 chr2 229336684 229336829 -23919754 + MIR3 SINE MIR 30 198 -10 297 0 0 0 chr2 229338137 229338170 -23918413 + (TG)n Simple_repeat Simple_repeat 2 34 0 296 268 116 29 chr2 229339070 229339208 -23917375 - MIR3 SINE MIR -50 158 9 222 331 126 34 chr2 229341147 229341322 -23915261 - MIR SINE MIR -33 229 39 376 236 150 7 chr2 229341526 229341666 -23914917 + MER63 DNA MER1_type 4 789 -273 513 226 0 0 chr2 229341893 229342039 -23914544 + CT-rich Low_complexity Low_complexity 3 148 0 307 366 24 0 chr2 229342683 229342806 -23913777 - L1M4 LINE L1 -2947 3199 3074 1660 164 16 62 chr2 229342806 229343129 -23913454 - AluJo SINE Alu 0 312 5 2230 115 0 0 chr2 229344359 229344663 -23911920 + AluSx SINE Alu 1 304 -8 1828 159 6 19 chr2 229344972 229345287 -23911296 - AluJo SINE Alu -1 311 1 495 226 29 0 chr2 229345487 229345589 -23910994 - MIR SINE MIR -2 260 156 2328 81 0 13 chr2 229345619 229345926 -23910657 - AluSx SINE Alu -9 303 1 616 210 85 28 chr2 229345932 229346108 -23910475 - L1MC5 LINE L1 -26 7935 7750 350 296 68 23 chr2 229346114 229346246 -23910337 - MIR SINE MIR -115 147 10 2062 125 37 0 chr2 229346270 229346567 -23910016 + AluSx SINE Alu 1 308 -4 193 268 0 0 chr2 229346597 229346638 -23909945 + MIR SINE MIR 217 257 -5 852 177 0 0 chr2 229347303 229347478 -23909105 + (GGATG)n Simple_repeat Simple_repeat 2 176 0 902 156 6 0 chr2 229347890 229348063 -23908520 + (GGATG)n Simple_repeat Simple_repeat 4 177 0 620 93 0 52 chr2 229348305 229348402 -23908181 + AluY SINE Alu 1 92 -219 1860 163 0 22 chr2 229349447 229349766 -23906817 - AluJo SINE Alu 0 312 1 379 157 96 0 chr2 229349839 229349922 -23906661 - MIR3 SINE MIR -8 200 110 496 294 69 29 chr2 229349988 229350036 -23906547 + L2 LINE L2 2234 2279 -1035 1765 172 48 82 chr2 229350036 229350414 -23906169 + MLT1A1 LTR MaLR 1 365 0 496 294 69 29 chr2 229350414 229350569 -23906014 + L2 LINE L2 2279 2445 -869 519 291 20 31 chr2 229350926 229351180 -23905403 - MER112 DNA MER1_type -1 259 9 279 292 84 76 chr2 229353721 229354218 -23902365 + L1MC4a LINE L1 5484 5881 -240 2350 95 7 0 chr2 229354473 229354778 -23901805 - AluSx SINE Alu -5 307 1 304 325 117 26 chr2 229354781 229355219 -23901364 + L2 LINE L2 2521 3049 -223 273 307 70 0 chr2 229355271 229355385 -23901198 + L2 LINE L2 3150 3271 -1 396 314 124 10 chr2 229356738 229356957 -23899626 + MIR SINE MIR 10 251 -11 543 333 49 71 chr2 229358053 229358160 -23898423 - MIR SINE MIR 0 262 154 1953 140 49 16 chr2 229358160 229358525 -23898058 - L1MB7 LINE L1 0 6184 5808 543 333 49 71 chr2 229358525 229358546 -23898037 - MIR SINE MIR -108 154 134 1841 148 6 25 chr2 229358546 229358864 -23897719 - AluJo SINE Alu 0 312 1 543 333 49 71 chr2 229358864 229359001 -23897582 - MIR SINE MIR -128 134 2 232 324 88 0 chr2 229359009 229359111 -23897472 - MIR SINE MIR -79 183 73 296 183 211 48 chr2 229359630 229359734 -23896849 - MIR SINE MIR -25 237 117 1034 165 0 0 chr2 229359736 229359894 -23896689 - FAM SINE Alu -17 158 1 482 259 61 66 chr2 229360627 229360839 -23895744 - MIR SINE MIR -27 235 25 332 247 77 82 chr2 229361123 229361262 -23895321 + MIR SINE MIR 30 167 -55 24 32 0 0 chr2 229363228 229363259 -23893324 + GC_rich Low_complexity Low_complexity 1 31 0 1977 153 3 0 chr2 229363413 229363714 -23892869 + AluSx SINE Alu 1 302 -10 207 216 20 0 chr2 229364226 229364277 -23892306 - MIR SINE MIR -201 61 10 230 353 58 36 chr2 229364326 229364465 -23892118 + L2 LINE L2 3111 3252 -20 1727 120 46 49 chr2 229365203 229365527 -23891056 - MER33 DNA MER1_type -1 323 1 388 231 0 0 chr2 229365691 229365769 -23890814 - MIR SINE MIR -116 146 69 532 259 29 35 chr2 229367551 229367725 -23888858 - MER91A DNA MER1_type 0 196 24 352 296 20 108 chr2 229369011 229369214 -23887369 + MER91A DNA MER1_type 12 196 0 2038 118 23 3 chr2 229370666 229370971 -23885612 - AluSx SINE Alu -1 311 1 568 294 23 56 chr2 229371732 229371939 -23884644 + L1MC/D LINE L1 3310 3511 -2635 1695 193 3 16 chr2 229371939 229372255 -23884328 + AluJb SINE Alu 1 312 0 209 105 0 26 chr2 229372262 229372300 -23884283 + (GAAA)n Simple_repeat Simple_repeat 4 40 0 1316 284 56 26 chr2 229372304 229373114 -23883469 + L1MC/D LINE L1 3912 4745 -1401 963 264 53 22 chr2 229373110 229373777 -23882806 + L1MC/D LINE L1 4971 5658 -504 * 455 194 119 52 chr2 229373781 229373915 -23882668 + L1M1 LINE L1 16 158 -7407 281 268 72 0 chr2 229373973 229374080 -23882503 + L1MC/D LINE L1 5723 5838 -340 181 0 69 0 chr2 229374138 229374167 -23882416 + (TTTTG)n Simple_repeat Simple_repeat 1 31 0 418 267 105 0 chr2 229374921 229375086 -23881497 + MIR SINE MIR 10 188 -64 261 231 263 17 chr2 229375697 229375817 -23880766 - MIR SINE MIR -62 146 36 1977 143 0 0 chr2 229376411 229376691 -23879892 + AluSx SINE Alu 1 280 -32 189 107 0 0 chr2 229376691 229376719 -23879864 + (GGAGAA)n Simple_repeat Simple_repeat 6 33 0 662 215 67 163 chr2 229377236 229377422 -23879161 - L2 LINE L2 0 3313 3111 2165 118 0 0 chr2 229377422 229377710 -23878873 + AluSx SINE Alu 3 290 -22 1938 120 36 0 chr2 229377712 229378012 -23878571 + AluSx SINE Alu 1 310 0 2272 156 14 0 chr2 229378015 229378375 -23878208 - MER47A DNA MER2_type -1 365 1 662 215 67 163 chr2 229378375 229378715 -23877868 - L2 LINE L2 -205 3108 2830 2325 107 0 0 chr2 229378957 229379255 -23877328 - AluSc SINE Alu -11 298 1 656 300 40 27 chr2 229379282 229379579 -23877004 + AluJo SINE Alu 2 302 0 1130 147 0 40 chr2 229380634 229380686 -23875897 - AluJo SINE Alu -122 190 137 2459 78 0 16 chr2 229380686 229380995 -23875588 - AluSx SINE Alu -8 304 1 1130 147 0 40 chr2 229380995 229381140 -23875443 - AluJo SINE Alu -175 137 1 192 77 0 0 chr2 229385015 229385041 -23871542 + (CCCCAG)n Simple_repeat Simple_repeat 3 28 0 2153 119 13 0 chr2 229385737 229386039 -23870544 + AluSq SINE Alu 1 306 -7 555 287 149 0 chr2 229386399 229386594 -23869989 + MIR SINE MIR 36 259 -3 182 128 26 0 chr2 229386594 229386633 -23869950 + (TTA)n Simple_repeat Simple_repeat 2 41 0 1236 162 0 25 chr2 229386745 229386943 -23869640 + AluJb SINE Alu 6 198 -114 1528 191 64 0 chr2 229387833 229388115 -23868468 - AluJo SINE Alu -12 300 1 605 183 79 8 chr2 229388923 229389049 -23867534 - AluJo SINE Alu -176 136 2 1087 188 20 5 chr2 229389104 229389306 -23867277 + MER3 DNA MER1_type 1 205 -4 728 179 60 55 chr2 229390052 229390287 -23866296 + MER106A DNA MER1_type 1 236 0 2145 91 40 3 chr2 229391528 229391825 -23864758 + AluY SINE Alu 1 308 -3 291 265 0 0 chr2 229391825 229391976 -23864607 + (TA)n Simple_repeat Simple_repeat 2 152 0 209 234 0 0 chr2 229391987 229392034 -23864549 - MIR SINE MIR -30 232 186 * 228 282 35 12 chr2 229392033 229392118 -23864465 + L2 LINE L2 3225 3311 -2 286 286 13 0 chr2 229392161 229392238 -23864345 - MIR SINE MIR -179 83 6 206 167 0 0 chr2 229392790 229392826 -23863757 - L2 LINE L2 -15 3257 3222 574 247 11 43 chr2 229394339 229394525 -23862058 - L2 LINE L2 0 3313 3134 327 132 0 59 chr2 229395125 229395193 -23861390 + Tigger5 DNA MER2_type 16 79 -2244 455 152 0 109 chr2 229395242 229395266 -23861317 + Tigger5 DNA MER2_type 2242 2267 -56 2275 119 0 0 chr2 229395266 229395576 -23861007 - AluSx SINE Alu 0 312 3 455 152 0 109 chr2 229395576 229395643 -23860940 + Tigger5 DNA MER2_type 2267 2323 0 393 279 120 22 chr2 229395797 229395980 -23860603 + MIR SINE MIR 7 207 -55 251 339 25 0 chr2 229397350 229397468 -23859115 - MIR SINE MIR -6 256 136 321 286 68 4 chr2 229397510 229397650 -23858933 - MIR SINE MIR -52 156 2 955 250 51 13 chr2 229398969 229399614 -23856969 + L1ME3A LINE L1 5060 5867 -303 1042 158 6 0 chr2 229399619 229399784 -23856799 + FRAM SINE Alu 1 166 -10 1283 206 31 24 chr2 229399786 229400077 -23856506 + L1ME3A LINE L1 5863 6155 -15 2192 71 39 61 chr2 229400079 229400390 -23856193 - AluY SINE Alu -7 304 1 3362 149 34 19 chr2 229400417 229401043 -23855540 + L1MB7 LINE L1 5550 6184 0 358 244 42 78 chr2 229401231 229401424 -23855159 + MIR SINE MIR 20 205 -57 738 276 120 0 chr2 229401506 229401723 -23854860 + MIR SINE MIR 20 262 0 239 136 0 91 chr2 229401786 229401852 -23854731 - L2 LINE L2 -86 3227 3168 278 284 235 10 chr2 229402086 229402290 -23854293 + L2 LINE L2 2971 3220 -93 395 243 72 9 chr2 229402290 229402401 -23854182 - L2 LINE L2 -3 3310 3193 226 180 40 0 chr2 229403074 229403124 -23853459 + (TATG)n Simple_repeat Simple_repeat 3 54 0 1380 152 9 14 chr2 229403363 229403580 -23853003 + AluJo SINE Alu 82 297 -15 1658 180 80 0 chr2 229403583 229403956 -23852627 - Charlie4a DNA MER1_type -105 403 1 27 29 0 0 chr2 229405034 229405068 -23851515 + AT_rich Low_complexity Low_complexity 1 34 0 1265 249 84 21 chr2 229407647 229408256 -23848327 - L2 LINE L2 -4 3309 2662 1517 124 241 11 chr2 229408256 229408538 -23848045 + MER47A DNA MER2_type 20 366 0 5349 260 142 34 chr2 229408538 229408727 -23847856 - L2 LINE L2 -649 2665 2498 571 268 8 0 chr2 229408727 229408854 -23847729 - FLAM_A SINE Alu -5 128 1 5349 260 142 34 chr2 229408854 229409938 -23846645 - L2 LINE L2 -816 2498 1533 880 137 0 0 chr2 229409938 229410062 -23846521 + FLAM_C SINE Alu 1 124 -9 5349 260 142 34 chr2 229410062 229410468 -23846115 - L2 LINE L2 -1781 1533 1172 1051 197 28 23 chr2 229410468 229410686 -23845897 - MER20 DNA MER1_type 0 219 1 5349 260 142 34 chr2 229410686 229411224 -23845359 - L2 LINE L2 -2142 1172 206 1793 173 7 26 chr2 229411589 229411896 -23844687 + AluSx SINE Alu 1 301 -11 597 239 113 61 chr2 229412219 229412394 -23844189 - L1ME4a LINE L1 -94 6027 5863 2231 101 3 0 chr2 229412394 229412682 -23843901 - AluSx SINE Alu -23 289 1 1922 148 3 0 chr2 229412684 229412975 -23843608 - AluJo SINE Alu -17 295 4 2257 92 3 29 chr2 229412985 229413291 -23843292 - AluSc SINE Alu -11 298 1 597 239 113 61 chr2 229413291 229413427 -23843156 - L1ME4a LINE L1 -266 5855 5685 244 288 100 19 chr2 229413490 229413650 -23842933 - L1ME4a LINE L1 -543 5578 5406 1960 129 18 0 chr2 229413701 229413979 -23842604 + 7SLRNA srpRNA srpRNA 1 283 -37 2560 58 0 10 chr2 229413989 229414300 -23842283 + AluY SINE Alu 1 308 -3 913 113 0 8 chr2 229414300 229414418 -23842165 + AluSq SINE Alu 135 251 -62 27 0 0 0 chr2 229414510 229414537 -23842046 + AT_rich Low_complexity Low_complexity 1 27 0 2333 108 0 0 chr2 229414538 229414844 -23841739 - AluSx SINE Alu -6 306 1 599 257 84 5 chr2 229414911 229415125 -23841458 - MIR SINE MIR -4 258 28 274 273 0 26 chr2 229415137 229415214 -23841369 - MIR SINE MIR -157 105 31 202 29 57 0 chr2 229415320 229415355 -23841228 + (TTTTG)n Simple_repeat Simple_repeat 5 41 0 263 258 151 0 chr2 229415410 229415503 -23841080 - MER91C DNA MER1_type -31 109 3 22 70 0 0 chr2 229416408 229416451 -23840132 + AT_rich Low_complexity Low_complexity 1 43 0 447 241 43 0 chr2 229416724 229416840 -23839743 + L2 LINE L2 3189 3309 -4 182 378 63 0 chr2 229416913 229417024 -23839559 + L2 LINE L2 2942 3059 -213 233 374 61 8 chr2 229417151 229417282 -23839301 + L2 LINE L2 3127 3264 -8 215 370 14 0 chr2 229417295 229417368 -23839215 + L2 LINE L2 3199 3272 0 294 331 79 0 chr2 229418594 229418733 -23837850 - MIR3 SINE MIR -23 185 36 500 171 18 27 chr2 229421342 229421453 -23835130 - L2 LINE L2 -1 3312 3203 799 256 10 54 chr2 229421615 229421912 -23834671 - L2 LINE L2 -158 3155 2872 318 26 0 0 chr2 229422696 229422735 -23833848 + (CA)n Simple_repeat Simple_repeat 2 40 0 436 211 96 0 chr2 229423316 229423420 -23833163 + MIR SINE MIR 41 154 -108 294 29 0 0 chr2 229426222 229426257 -23830326 + (GAA)n Simple_repeat Simple_repeat 2 36 0 189 321 28 19 chr2 229426580 229426686 -23829897 - L2 LINE L2 -10 3303 3197 2190 121 0 0 chr2 229426911 229427208 -23829375 + AluSc SINE Alu 1 297 -12 21 0 0 0 chr2 229427358 229427379 -23829204 + AT_rich Low_complexity Low_complexity 1 21 0 255 208 0 0 chr2 229427381 229427429 -23829154 - L1MC5 LINE L1 -399 7562 7515 2101 138 3 3 chr2 229427430 229427728 -23828855 - AluJb SINE Alu -14 298 1 212 204 41 0 chr2 229428035 229428084 -23828499 + GA-rich Low_complexity Low_complexity 2 52 0 482 293 134 26 chr2 229428748 229428980 -23827603 + MIR SINE MIR 6 262 0 412 270 99 0 chr2 229431280 229431391 -23825192 - L2 LINE L2 -1 3312 3191 2116 105 3 33 chr2 229431989 229432295 -23824288 + AluSq SINE Alu 4 300 -13 375 344 141 4 chr2 229432295 229432571 -23824012 - L3b LINE CR1 -133 1450 1137 1730 156 80 4 chr2 229432630 229432905 -23823678 + AluJb SINE Alu 1 296 -16 200 412 88 0 chr2 229433429 229433531 -23823052 + L2 LINE L2 3118 3228 -44 2256 105 7 0 chr2 229435676 229435971 -23820612 - AluSq SINE Alu -16 297 1 2196 110 10 13 chr2 229436010 229436320 -23820263 - AluSx SINE Alu -3 309 1 1153 133 6 0 chr2 229436322 229436488 -23820095 - AluSg/x SINE Alu -16 296 130 216 97 0 0 chr2 229436489 229436520 -23820063 + (T)n Simple_repeat Simple_repeat 1 31 0 1211 111 28 22 chr2 229436727 229436861 -23819722 + AluJb SINE Alu 3 140 -172 2406 71 3 3 chr2 229436861 229437158 -23819425 + AluY SINE Alu 2 298 -13 1211 111 28 22 chr2 229437158 229437204 -23819379 + AluJb SINE Alu 140 184 -128 477 86 0 0 chr2 229437205 229437300 -23819283 + AluJ/FRAM SINE Alu 224 318 0 1708 168 14 7 chr2 229437324 229437615 -23818968 + AluJb SINE Alu 5 297 -15 219 175 219 53 chr2 229437647 229437761 -23818822 - MIR3 SINE MIR -73 135 3 180 0 0 0 chr2 229438632 229438652 -23817931 + (CCGAG)n Simple_repeat Simple_repeat 2 21 0 28 0 0 0 chr2 229438798 229438826 -23817757 + GC_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 229438866 229438888 -23817695 + GC_rich Low_complexity Low_complexity 1 22 0 24 103 0 0 chr2 229439408 229439495 -23817088 + AT_rich Low_complexity Low_complexity 1 87 0 27 81 0 0 chr2 229439520 229439582 -23817001 + AT_rich Low_complexity Low_complexity 1 62 0 22 56 0 0 chr2 229439641 229439677 -23816906 + AT_rich Low_complexity Low_complexity 1 36 0 326 160 0 106 chr2 229439789 229439883 -23816700 - MER20 DNA MER1_type 0 219 136 1075 162 4 57 chr2 229439883 229440107 -23816476 - AluJo SINE Alu 0 312 117 1872 60 0 19 chr2 229440107 229440375 -23816208 - L1MA2 LINE L1 0 6304 6042 1075 162 4 57 chr2 229440375 229440404 -23816179 - AluJo SINE Alu -195 117 88 243 194 194 40 chr2 229440407 229440531 -23816052 - MER20 DNA MER1_type -76 143 1 315 0 0 0 chr2 229441139 229441174 -23815409 + (TG)n Simple_repeat Simple_repeat 2 36 0 412 273 45 23 chr2 229441190 229441322 -23815261 + L2 LINE L2 3134 3268 -4 1695 174 7 37 chr2 229441662 229441817 -23814766 - AluJo SINE Alu -24 288 145 2350 98 3 0 chr2 229441817 229442114 -23814469 - AluSp SINE Alu -15 298 1 1695 174 7 37 chr2 229442114 229442252 -23814331 - AluJo SINE Alu -167 145 4 270 59 0 0 chr2 229442252 229442286 -23814297 + THE1B LTR MaLR 1 34 -330 280 226 0 0 chr2 229442290 229442343 -23814240 + MLT1A1 LTR MaLR 83 135 -230 828 114 0 5 chr2 229442345 229442555 -23814028 + AluSx SINE Alu 2 306 -4 623 63 0 13 chr2 229442556 229442635 -23813948 + AluS SINE Alu 2 79 -234 2107 113 0 11 chr2 229442965 229443307 -23813276 + AluSx SINE Alu 6 344 0 2193 84 11 0 chr2 229443458 229443731 -23812852 - AluSx SINE Alu -12 300 25 2167 112 0 23 chr2 229443731 229444035 -23812548 - AluSx SINE Alu -15 297 1 1951 149 14 3 chr2 229444050 229444345 -23812238 - AluSx SINE Alu -14 298 1 242 323 203 47 chr2 229444416 229444766 -23811817 - L2 LINE L2 -578 2736 2442 2502 130 61 12 chr2 229444766 229445077 -23811506 - MSTC LTR MaLR 0 428 91 2226 120 3 0 chr2 229445077 229445376 -23811207 - AluSx SINE Alu -12 300 1 2502 130 61 12 chr2 229445376 229445472 -23811111 - MSTC LTR MaLR -337 91 1 242 323 203 47 chr2 229445472 229445678 -23810905 - L2 LINE L2 -872 2442 2093 1489 135 13 0 chr2 229445678 229445907 -23810676 - AluSg SINE Alu -34 276 45 2154 90 32 0 chr2 229446158 229446435 -23810148 - AluSg SINE Alu -20 290 5 4624 127 104 112 chr2 229446729 229448265 -23808318 + pTR5 LTR ERV1 742 2438 0 1345 168 4 4 chr2 229448566 229448792 -23807791 - AluJb SINE Alu -3 309 84 876 308 41 62 chr2 229448794 229449016 -23807567 - L2 LINE L2 -1 3312 3087 1823 168 4 0 chr2 229449016 229449296 -23807287 + AluJo SINE Alu 1 281 -31 422 18 18 0 chr2 229449299 229449354 -23807229 + (TAAAA)n Simple_repeat Simple_repeat 2 57 0 1962 173 0 3 chr2 229449354 229449660 -23806923 + AluJo SINE Alu 2 306 -6 876 308 41 62 chr2 229449660 229449701 -23806882 - L2 LINE L2 -227 3086 3046 2240 111 7 0 chr2 229449701 229449998 -23806585 - AluSq SINE Alu -14 299 1 876 308 41 62 chr2 229449998 229450291 -23806292 - L2 LINE L2 -267 3046 2763 199 319 121 0 chr2 229450863 229450954 -23805629 - L2 LINE L2 -32 3281 3180 2189 115 3 0 chr2 229450991 229451278 -23805305 + AluSx SINE Alu 1 288 -24 1873 80 0 4 chr2 229451761 229451998 -23804585 + AluY SINE Alu 54 289 -22 951 172 0 0 chr2 229452374 229452544 -23804039 - FRAM SINE Alu 0 175 6 2170 110 20 7 chr2 229452863 229453164 -23803419 + AluSg SINE Alu 1 305 -5 541 291 57 0 chr2 229453261 229453436 -23803147 + MIR SINE MIR 76 260 -2 1631 137 88 49 chr2 229453447 229453731 -23802852 - AluJb SINE Alu -17 295 1 787 154 0 0 chr2 229453733 229453843 -23802740 - FRAM SINE Alu -22 154 45 23 33 0 0 chr2 229453914 229453944 -23802639 + AT_rich Low_complexity Low_complexity 1 30 0 370 136 0 0 chr2 229453992 229454051 -23802532 + MLT1F1 LTR MaLR 1 59 -508 2341 79 14 0 chr2 229454051 229454342 -23802241 - AluSg SINE Alu -15 295 1 415 200 50 20 chr2 229454347 229454447 -23802136 + MLT1F1 LTR MaLR 465 567 0 1212 156 38 25 chr2 229454477 229454714 -23801869 - MLT1A1 LTR MaLR 0 365 126 1652 119 4 0 chr2 229454715 229454942 -23801641 - AluSg/x SINE Alu -18 292 65 718 307 87 52 chr2 229457614 229458262 -23798321 - L2 LINE L2 -13 3259 2636 1686 209 53 45 chr2 229458952 229459038 -23797545 - MER44D DNA MER2_type -1979 508 424 2240 119 0 0 chr2 229459038 229459332 -23797251 + AluSx SINE Alu 15 308 -4 1686 209 53 45 chr2 229459332 229459694 -23796889 - MER44D DNA MER2_type -2063 424 1 1012 275 39 7 chr2 229459694 229459974 -23796609 - L2 LINE L2 -2041 1273 985 218 331 62 66 chr2 229460010 229460171 -23796412 + MIR SINE MIR 42 195 -67 2334 107 0 0 chr2 229460200 229460498 -23796085 + AluSx SINE Alu 1 298 -14 771 241 91 30 chr2 229462023 229462255 -23794328 + MIR SINE MIR 2 247 -15 2147 92 44 10 chr2 229462415 229462709 -23793874 - AluSc SINE Alu -5 304 1 2327 100 13 3 chr2 229462715 229463024 -23793559 - AluSx SINE Alu 0 312 1 270 268 158 18 chr2 229463072 229463236 -23793347 - HAL1 LINE L1 -1530 977 791 933 287 169 35 chr2 229463257 229463919 -23792664 - HAL1 LINE L1 -1748 759 9 269 266 0 25 chr2 229464211 229464290 -23792293 - MER112 DNA MER1_type -183 77 1 2140 107 21 0 chr2 229464365 229464655 -23791928 + AluSq SINE Alu 1 296 -17 21 0 0 0 chr2 229464655 229464676 -23791907 + AT_rich Low_complexity Low_complexity 1 21 0 183 333 111 14 chr2 229465128 229465200 -23791383 - L3 LINE CR1 -2 1575 1497 643 203 0 31 chr2 229465353 229465481 -23791102 + MER5C DNA MER1_type 1 124 -200 1861 166 0 10 chr2 229468055 229468362 -23788221 + AluJo SINE Alu 1 304 -8 209 343 90 15 chr2 229469174 229469308 -23787275 + MIR SINE MIR 2 145 -117 1957 151 11 0 chr2 229472260 229472545 -23784038 + AluJb SINE Alu 5 292 -20 815 294 68 24 chr2 229472716 229473053 -23783530 + LTR16C LTR ERVL 97 448 -43 562 195 73 32 chr2 229473067 229473190 -23783393 - FRAM SINE Alu -25 151 24 1124 156 10 30 chr2 229473214 229473413 -23783170 - AluJo SINE Alu -117 195 1 397 119 0 0 chr2 229473455 229473514 -23783069 - L2 LINE L2 -30 3242 3184 285 308 23 28 chr2 229473589 229473775 -23782808 + L2 LINE L2 2791 2974 -298 849 102 56 122 chr2 229474257 229474453 -23782130 + MLT1C LTR MaLR 1 183 -284 631 191 9 0 chr2 229474454 229474569 -23782014 + FLAM_A SINE Alu 7 122 -20 1169 142 0 31 chr2 229474579 229474823 -23781760 + MLT1C LTR MaLR 174 467 0 199 348 61 17 chr2 229474971 229475086 -23781497 + L2 LINE L2 1579 1698 -1616 194 143 143 0 chr2 229475153 229475195 -23781388 + L2 LINE L2 1651 1698 -1616 324 346 61 26 chr2 229475281 229475509 -23781074 - LTR16C LTR ERVL 0 491 256 1656 190 7 0 chr2 229475764 229476053 -23780530 + AluJo SINE Alu 1 291 -21 949 215 14 10 chr2 229476206 229476415 -23780168 + AluJb SINE Alu 73 282 -30 1168 102 0 6 chr2 229476579 229476773 -23779810 + AluSp SINE Alu 130 322 0 375 73 0 0 chr2 229477059 229477114 -23779469 - Alu SINE Alu -6 296 242 1949 126 0 23 chr2 229477115 229477252 -23779331 + AluSx SINE Alu 3 142 -170 2323 87 3 0 chr2 229477252 229477561 -23779022 + AluSp SINE Alu 1 310 -3 1949 126 0 23 chr2 229477561 229477725 -23778858 + AluSx SINE Alu 142 297 -15 1400 221 57 82 chr2 229477749 229477954 -23778629 + L1ME3 LINE L1 2474 2683 -3463 1757 174 7 0 chr2 229477954 229478248 -23778335 - AluJo SINE Alu -16 296 1 1400 221 57 82 chr2 229478248 229478325 -23778258 + L1ME3 LINE L1 2683 2760 -3386 2443 68 0 3 chr2 229478325 229478635 -23777948 - AluY SINE Alu -2 309 1 1400 221 57 82 chr2 229478635 229478804 -23777779 + L1ME3 LINE L1 2760 2910 -3236 1972 139 7 16 chr2 229478804 229479114 -23777469 - AluSx SINE Alu -1 311 5 1400 221 57 82 chr2 229479114 229479258 -23777325 + L1ME3 LINE L1 2910 3056 -3090 1144 202 42 98 chr2 229479262 229479569 -23777014 + AluJo SINE Alu 1 290 -12 1900 119 7 7 chr2 229479579 229479864 -23776719 + AluSx SINE Alu 1 285 -27 322 154 62 0 chr2 229479965 229480030 -23776553 + FLAM_A SINE Alu 63 131 -2 415 247 16 16 chr2 229480051 229480237 -23776346 + L1ME3 LINE L1 3045 3230 -2916 2144 104 0 0 chr2 229480269 229480558 -23776025 + AluY SINE Alu 20 308 -3 953 217 164 65 chr2 229480615 229481104 -23775479 + L1ME3 LINE L1 5625 6161 -1 327 288 110 0 chr2 229481150 229481296 -23775287 + L1ME LINE L1 4653 4814 -1332 1383 160 0 9 chr2 229481296 229481521 -23775062 + AluJb SINE Alu 82 304 -8 827 243 55 74 chr2 229481522 229481624 -23774959 + L1ME LINE L1 4821 4923 -1241 2587 38 0 6 chr2 229481624 229481937 -23774646 + AluY SINE Alu 1 311 0 827 243 55 74 chr2 229481937 229482188 -23774395 + L1ME LINE L1 4923 5177 -987 2596 14 3 0 chr2 229482188 229482484 -23774099 + AluY SINE Alu 1 297 -14 827 243 55 74 chr2 229482484 229482719 -23773864 + L1ME LINE L1 5177 5390 -774 2068 123 0 3 chr2 229482719 229483019 -23773564 + AluSx SINE Alu 1 299 -13 827 243 55 74 chr2 229483019 229483186 -23773397 + L1ME LINE L1 5390 5559 -605 1246 161 23 0 chr2 229483197 229483414 -23773169 - AluSg/x SINE Alu -2 308 87 547 245 33 43 chr2 229483420 229483515 -23773068 + L1ME LINE L1 5552 5647 -523 780 212 100 6 chr2 229483515 229483685 -23772898 - MER5A DNA MER1_type -2 187 2 547 245 33 43 chr2 229483685 229483747 -23772836 + L1ME LINE L1 5647 5709 -461 1713 137 24 10 chr2 229483747 229484040 -23772543 + AluSg SINE Alu 1 297 -13 547 245 33 43 chr2 229484040 229484065 -23772518 + L1ME LINE L1 5709 5733 -437 4784 118 45 40 chr2 229484065 229485417 -23771166 - pTR5 LTR ERV1 -12 2426 744 266 164 27 27 chr2 229485417 229485490 -23771093 + L1ME LINE L1 5703 5775 -387 1312 154 25 105 chr2 229485493 229485817 -23770766 - AluYb8 SINE Alu -20 298 1 927 161 33 11 chr2 229485817 229485997 -23770586 + AluJo SINE Alu 115 298 -14 982 284 29 14 chr2 229486002 229486475 -23770108 + L1MC4 LINE L1 6962 7438 -604 282 300 42 84 chr2 229486593 229486862 -23769721 + L1MC4 LINE L1 7494 7740 -302 2260 81 0 16 chr2 229486862 229487172 -23769411 + AluY SINE Alu 3 307 -4 282 300 42 84 chr2 229487172 229487332 -23769251 + L1MC4 LINE L1 7740 7905 -137 23 0 0 0 chr2 229487399 229487422 -23769161 + AT_rich Low_complexity Low_complexity 1 23 0 282 352 50 25 chr2 229487484 229487683 -23768900 - L2 LINE L2 -653 2661 2458 1854 145 10 0 chr2 229487689 229487986 -23768597 + AluSx SINE Alu 1 300 -12 604 314 4 44 chr2 229487993 229488219 -23768364 - MIR SINE MIR -1 261 45 2673 296 79 83 chr2 229490181 229490862 -23765721 - L2 LINE L2 0 3313 2631 397 101 29 0 chr2 229490862 229490931 -23765652 + MER41A LTR ERV1 400 470 -84 2673 296 79 83 chr2 229490931 229491116 -23765467 - L2 LINE L2 -682 2631 2447 2034 131 0 10 chr2 229491116 229491430 -23765153 - AluSx SINE Alu -1 311 1 2673 296 79 83 chr2 229491430 229491745 -23764838 - L2 LINE L2 -866 2447 2132 2154 119 0 0 chr2 229491745 229492040 -23764543 + AluSg SINE Alu 1 295 -15 2673 296 79 83 chr2 229492040 229492666 -23763917 - L2 LINE L2 -1181 2132 1462 348 111 0 0 chr2 229492832 229492886 -23763697 + (ATG)n Simple_repeat Simple_repeat 2 55 0 283 304 59 20 chr2 229492921 229493023 -23763560 - MIR SINE MIR -46 216 111 899 252 43 9 chr2 229493059 229493289 -23763294 - MIR SINE MIR -1 261 24 228 299 15 0 chr2 229495255 229495322 -23761261 - L2 LINE L2 0 3272 3205 375 292 62 0 chr2 229496421 229496551 -23760032 - MIR3 SINE MIR -34 174 37 202 214 0 0 chr2 229496820 229496862 -23759721 + (TTCA)n Simple_repeat Simple_repeat 3 44 0 2215 85 0 20 chr2 229498559 229498864 -23757719 - AluSq SINE Alu -14 299 1 272 279 0 0 chr2 229501194 229501262 -23755321 + (TA)n Simple_repeat Simple_repeat 2 69 0 261 0 0 0 chr2 229501281 229501310 -23755273 + (TG)n Simple_repeat Simple_repeat 2 30 0 228 280 0 70 chr2 229502611 229502797 -23753786 + C-rich Low_complexity Low_complexity 6 178 0 * 285 245 8 34 chr2 229502718 229502954 -23753629 + CT-rich Low_complexity Low_complexity 1 230 0 242 235 12 0 chr2 229503010 229503091 -23753492 + CT-rich Low_complexity Low_complexity 1 82 0 1926 121 3 0 chr2 229503809 229504119 -23752464 + AluSx SINE Alu 1 311 0 363 254 79 79 chr2 229504177 229504253 -23752330 + MIR SINE MIR 85 160 -102 2177 142 40 0 chr2 229504253 229504577 -23752006 - MER1B DNA MER1_type 0 337 1 363 254 79 79 chr2 229504577 229504677 -23751906 + MIR SINE MIR 159 261 -1 514 279 15 0 chr2 229505369 229505505 -23751078 - MIR SINE MIR -8 254 117 515 283 94 11 chr2 229505976 229506167 -23750416 + MER58C DNA MER1_type 3 209 -6 1300 147 25 133 chr2 229507265 229507618 -23748965 - AluYb8 SINE Alu -3 315 1 468 294 29 64 chr2 229510383 229510471 -23746112 + MIR SINE MIR 62 151 -111 1738 147 63 3 chr2 229510471 229510757 -23745826 + AluJb SINE Alu 1 303 -9 468 294 29 64 chr2 229510757 229510872 -23745711 + MIR SINE MIR 151 258 -4 187 321 37 0 chr2 229511480 229511561 -23745022 - L2 LINE L2 -43 3270 3187 368 221 206 0 chr2 229512315 229512446 -23744137 + MIR SINE MIR 61 218 -44 596 242 15 0 chr2 229513322 229513454 -23743129 + MIR SINE MIR 124 257 -5 448 318 112 14 chr2 229513477 229513754 -23742829 + L2 LINE L2 3010 3313 0 605 215 186 17 chr2 229513758 229513935 -23742648 + MIR SINE MIR 37 243 -19 242 167 37 0 chr2 229514654 229514708 -23741875 + G-rich Low_complexity Low_complexity 1 56 0 22 35 0 0 chr2 229515361 229515390 -23741193 + GC_rich Low_complexity Low_complexity 1 29 0 956 114 0 0 chr2 229515801 229515933 -23740650 - AluJb SINE Alu -178 134 3 1197 102 6 0 chr2 229516083 229516250 -23740333 - AluSp SINE Alu -9 304 137 830 270 87 11 chr2 229516270 229516593 -23739990 + L1MC4a LINE L1 5589 5962 -159 1975 132 39 28 chr2 229516593 229516745 -23739838 + MER46B DNA MER2_type 1 37 -2694 1913 99 7 63 chr2 229516745 229517076 -23739507 + AluSq SINE Alu 1 314 0 1975 132 39 28 chr2 229517076 229517278 -23739305 + MER46B DNA MER2_type 37 235 -1 830 270 87 11 chr2 229517278 229517408 -23739175 + L1MC4a LINE L1 5962 6081 -40 329 205 210 14 chr2 229518451 229518566 -23738017 + MIR SINE MIR 32 164 -44 249 274 137 26 chr2 229518560 229518677 -23737906 - L2 LINE L2 -5 3308 3179 * 240 204 0 0 chr2 229518714 229518758 -23737825 + MIR SINE MIR 216 259 -3 850 134 0 0 chr2 229518876 229518995 -23737588 + AluJb SINE Alu 6 124 -188 809 147 0 0 chr2 229519010 229519139 -23737444 - AluSg/x SINE Alu -1 311 183 2104 111 10 0 chr2 229519260 229519558 -23737025 + AluSq SINE Alu 1 301 -12 1796 160 3 16 chr2 229523972 229524279 -23732304 - AluJo SINE Alu -9 303 1 469 319 58 11 chr2 229524446 229524634 -23731949 + MIR SINE MIR 58 254 -8 2082 105 48 0 chr2 229524697 229524991 -23731592 + AluSx SINE Alu 1 308 -4 2165 92 38 0 chr2 229525230 229525523 -23731060 + AluSc SINE Alu 1 304 -5 728 263 78 17 chr2 229525683 229525915 -23730668 - MIR SINE MIR -15 247 2 2334 107 0 0 chr2 229527440 229527738 -23728845 - AluSx SINE Alu -14 298 1 232 345 36 61 chr2 229527767 229527932 -23728651 - MIR SINE MIR -67 195 35 1030 258 63 17 chr2 229527965 229528245 -23728338 + L2 LINE L2 985 1281 -2033 2571 197 55 13 chr2 229528245 229528607 -23727976 + MER44D DNA MER2_type 1 448 -2039 2328 123 0 0 chr2 229528607 229528915 -23727668 - AluSx SINE Alu -4 308 1 2571 197 55 13 chr2 229528915 229529080 -23727503 + MER44D DNA MER2_type 448 605 0 1030 258 63 17 chr2 229529080 229529101 -23727482 + L2 LINE L2 1281 1300 -2014 1727 138 0 0 chr2 229529644 229529883 -23726700 - AluSx SINE Alu -73 239 1 386 247 52 0 chr2 229529947 229530024 -23726559 - L2 LINE L2 -1 3271 3191 2254 90 0 0 chr2 229530055 229530334 -23726249 - AluSq SINE Alu -33 280 2 1269 154 5 45 chr2 229530362 229530583 -23726000 + AluJb SINE Alu 85 296 -16 584 289 188 45 chr2 229530583 229530743 -23725840 - L2 LINE L2 -106 3207 3071 252 0 0 0 chr2 229530743 229530771 -23725812 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 584 289 188 45 chr2 229530771 229530785 -23725798 - L2 LINE L2 -242 3071 3060 2328 57 0 14 chr2 229530785 229531064 -23725519 - AluY SINE Alu -36 275 1 584 289 188 45 chr2 229531064 229531464 -23725119 - L2 LINE L2 -253 3060 2543 1055 277 138 14 chr2 229531537 229532038 -23724545 + MLT1L LTR MaLR 47 609 -6 815 236 30 86 chr2 229532051 229532094 -23724489 - L2 LINE L2 -824 2490 2446 255 31 0 0 chr2 229532094 229532126 -23724457 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 2175 87 18 0 chr2 229532126 229532402 -23724181 - AluSq SINE Alu -32 281 1 815 236 30 86 chr2 229532402 229532658 -23723925 - L2 LINE L2 -866 2448 2207 21 57 0 0 chr2 229532709 229532744 -23723839 + AT_rich Low_complexity Low_complexity 1 35 0 389 189 142 28 chr2 229532759 229532865 -23723718 - L1MC5 LINE L1 -7 7954 7837 601 309 101 15 chr2 229532873 229533200 -23723383 - L2 LINE L2 -1135 2179 1825 243 61 0 0 chr2 229533675 229533708 -23722875 + (CA)n Simple_repeat Simple_repeat 2 34 0 2049 111 34 3 chr2 229533750 229533922 -23722661 - AluSq SINE Alu -6 307 121 423 0 0 0 chr2 229533922 229533969 -23722614 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 2049 111 34 3 chr2 229533969 229534094 -23722489 - AluSq SINE Alu -192 121 1 515 213 0 0 chr2 229534351 229534459 -23722124 - MLT1D LTR MaLR -1 504 397 1702 160 3 31 chr2 229534464 229534799 -23721784 + AluJb SINE Alu 1 327 0 2115 117 16 23 chr2 229534802 229535109 -23721474 + AluSx SINE Alu 1 305 -7 672 202 8 0 chr2 229535119 229535243 -23721340 + FLAM_C SINE Alu 5 129 -14 646 92 55 18 chr2 229535266 229535375 -23721208 - AluSp/q SINE Alu -20 293 181 448 240 8 8 chr2 229535628 229535753 -23720830 + AluSp/q SINE Alu 173 297 -16 825 194 66 53 chr2 229535753 229535980 -23720603 - L1ME1 LINE L1 -9 6157 5928 2231 118 3 10 chr2 229535980 229536294 -23720289 - AluSx SINE Alu 0 312 1 206 174 22 0 chr2 229536302 229536348 -23720235 + CT-rich Low_complexity Low_complexity 3 49 0 444 326 0 0 chr2 229536498 229536627 -23719956 + HERV16 LTR ERVL 1310 1438 -3558 261 0 0 0 chr2 229536673 229536702 -23719881 + (TG)n Simple_repeat Simple_repeat 2 30 0 1698 157 39 14 chr2 229536704 229536990 -23719593 - AluJb SINE Alu -18 294 2 1680 218 69 17 chr2 229537137 229537601 -23718982 + LTR16C LTR ERVL 1 488 -3 699 251 132 81 chr2 229537623 229537795 -23718788 + L1M4 LINE L1 4081 4243 -1903 2176 120 0 3 chr2 229537795 229538095 -23718488 - AluSc SINE Alu -10 299 1 699 251 132 81 chr2 229538095 229538272 -23718311 + L1M4 LINE L1 4243 4409 -1737 387 0 0 0 chr2 229538272 229538315 -23718268 + (TG)n Simple_repeat Simple_repeat 2 44 0 2256 112 3 0 chr2 229538315 229538601 -23717982 - AluSx SINE Alu -25 287 1 699 251 132 81 chr2 229538601 229538821 -23717762 + L1M4 LINE L1 4409 4697 -1449 682 221 0 0 chr2 229538821 229538943 -23717640 + FLAM_A SINE Alu 1 122 -11 699 251 132 81 chr2 229538943 229539066 -23717517 + L1M4 LINE L1 4697 4812 -1334 1721 95 9 0 chr2 229539114 229539336 -23717247 - AluSq SINE Alu -6 307 84 787 244 39 0 chr2 229539341 229539571 -23717012 + L1M4 LINE L1 3788 4026 -2120 2253 95 0 0 chr2 229539571 229539875 -23716708 + AluSx SINE Alu 1 304 0 2119 198 89 68 chr2 229539884 229540435 -23716148 - MER31-int LTR ERV1 -2768 2168 1593 1684 193 29 13 chr2 229540435 229540741 -23715842 + AluJb SINE Alu 1 311 -1 2119 198 89 68 chr2 229540741 229540983 -23715600 - MER31-int LTR ERV1 -3343 1593 1358 2205 124 3 16 chr2 229540986 229541300 -23715283 - AluSg SINE Alu 0 310 1 1916 158 0 3 chr2 229541300 229541603 -23714980 - AluJb SINE Alu -9 303 1 812 206 0 0 chr2 229541603 229541739 -23714844 - AluJo SINE Alu -176 136 1 572 233 23 64 chr2 229541827 229541999 -23714584 - MER34 LTR ERV1 -377 165 1 183 289 19 0 chr2 229542741 229542897 -23713686 + (CA)n Simple_repeat Simple_repeat 2 160 0 461 241 25 25 chr2 229542929 229543091 -23713492 + (CATA)n Simple_repeat Simple_repeat 4 165 0 262 235 8 8 chr2 229543117 229543236 -23713347 + (CATATA)n Simple_repeat Simple_repeat 2 120 0 185 247 12 0 chr2 229543223 229543304 -23713279 + (CA)n Simple_repeat Simple_repeat 2 83 0 * 2762 177 21 23 chr2 229543308 229543838 -23712745 + MLT1F LTR MaLR 1 529 -13 216 235 0 29 chr2 229543893 229543961 -23712622 + (CATATA)n Simple_repeat Simple_repeat 4 69 0 229 274 7 7 chr2 229543965 229544111 -23712472 + (CA)n Simple_repeat Simple_repeat 1 146 0 2454 98 0 0 chr2 229544226 229544532 -23712051 - AluSg SINE Alu -4 306 1 263 244 183 12 chr2 229544958 229545040 -23711543 - MIR SINE MIR -54 208 113 702 292 179 15 chr2 229545078 229545224 -23711359 - L2 LINE L2 -19 3294 3173 2124 126 10 3 chr2 229545224 229545548 -23711035 + AluSq SINE Alu 4 313 0 702 292 179 15 chr2 229545548 229545953 -23710630 - L2 LINE L2 -140 3173 2645 786 173 23 15 chr2 229546094 229546227 -23710356 + AluJo SINE Alu 1 134 -178 491 254 10 104 chr2 229546376 229546569 -23710014 - MIR SINE MIR 0 262 88 1875 137 22 4 chr2 229546625 229546902 -23709681 - AluJb SINE Alu -30 282 1 348 43 0 0 chr2 229547053 229547099 -23709484 + (TG)n Simple_repeat Simple_repeat 2 47 0 497 196 57 113 chr2 229548231 229548326 -23708257 - MER113 DNA MER1_type? -304 217 118 2187 125 0 0 chr2 229548326 229548623 -23707960 + AluSx SINE Alu 1 297 -15 497 196 57 113 chr2 229548623 229548757 -23707826 - MER113 DNA MER1_type? -403 118 1 2271 108 3 3 chr2 229548785 229549105 -23707478 - AluSp SINE Alu 0 313 1 4270 152 54 36 chr2 229549117 229549667 -23706916 - L1MB8 LINE L1 0 6178 5640 2302 120 0 0 chr2 229549667 229549966 -23706617 - AluSx SINE Alu -13 299 1 4270 152 54 36 chr2 229549966 229550139 -23706444 - L1MB8 LINE L1 -538 5640 5472 2372 109 0 0 chr2 229550139 229550442 -23706141 - AluSx SINE Alu -9 303 1 4270 152 54 36 chr2 229550442 229550584 -23705999 - L1MB8 LINE L1 -706 5472 5296 2147 131 0 0 chr2 229551923 229552214 -23704369 - AluSx SINE Alu -21 291 1 252 377 154 0 chr2 229552333 229552508 -23704075 - MIR SINE MIR -18 244 43 235 308 154 12 chr2 229553461 229553630 -23702953 + MIR SINE MIR 15 207 -55 1557 163 83 14 chr2 229553868 229554144 -23702439 + AluJo SINE Alu 1 295 -17 218 240 0 20 chr2 229554232 229554282 -23702301 + (CATATA)n Simple_repeat Simple_repeat 5 53 0 531 312 67 9 chr2 229554615 229555060 -23701523 - L2 LINE L2 -257 3056 2560 884 310 23 33 chr2 229556788 229556909 -23699674 + LTR16C LTR ERVL 97 218 -273 2305 105 13 0 chr2 229556909 229557214 -23699369 + AluSq SINE Alu 1 309 -4 884 310 23 33 chr2 229557214 229557489 -23699094 + LTR16C LTR ERVL 218 489 -2 378 221 65 0 chr2 229557493 229557570 -23699013 - L2 LINE L2 -32 3281 3200 266 380 85 36 chr2 229557626 229558073 -23698510 + L2 LINE L2 2804 3272 0 2530 55 0 26 chr2 229558433 229558740 -23697843 - AluY SINE Alu -12 299 1 3773 111 0 4 chr2 229558993 229559506 -23697077 + MER9 LTR ERVK 1 511 0 1552 218 3 19 chr2 229559660 229559976 -23696607 + AluJo SINE Alu 1 311 -1 328 243 18 0 chr2 229559976 229560087 -23696496 + GA-rich Low_complexity Low_complexity 1 113 0 328 223 22 86 chr2 229560100 229560141 -23696442 + L2 LINE L2 1579 1621 -1693 2469 103 0 0 chr2 229560141 229560452 -23696131 + AluSx SINE Alu 1 311 -1 328 223 22 86 chr2 229560452 229560549 -23696034 + L2 LINE L2 1621 1708 -1606 455 320 26 62 chr2 229560625 229560934 -23695649 - LTR16C LTR ERVL 0 491 194 183 42 0 0 chr2 229561627 229561651 -23694932 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 381 256 103 104 chr2 229561656 229561908 -23694675 + L1MDb LINE L1 930 1181 -5215 2363 98 7 0 chr2 229561908 229562215 -23694368 + AluY SINE Alu 1 309 -2 381 256 103 104 chr2 229562215 229562389 -23694194 + L1MDb LINE L1 1181 1374 -5022 2066 144 10 7 chr2 229562389 229562694 -23693889 + AluJb SINE Alu 1 306 -6 381 256 103 104 chr2 229562694 229562739 -23693844 + L1MDb LINE L1 1374 1418 -4978 423 284 52 82 chr2 229562743 229562841 -23693742 + L1MDb LINE L1 1446 1545 -5042 2105 91 95 0 chr2 229562841 229563126 -23693457 + AluSq SINE Alu 1 312 -1 423 284 52 82 chr2 229563126 229563239 -23693344 + L1MDb LINE L1 1545 1660 -4927 2588 152 19 21 chr2 229563239 229563668 -23692915 + MSTC LTR MaLR 1 428 0 423 284 52 82 chr2 229563668 229563699 -23692884 + L1MDb LINE L1 1660 1690 -4897 2420 91 0 0 chr2 229563699 229563997 -23692586 - AluY SINE Alu -13 298 1 423 284 52 82 chr2 229563997 229564110 -23692473 + L1MDb LINE L1 1690 1805 -4782 1931 122 30 7 chr2 229564110 229564405 -23692178 - AluSq SINE Alu -11 302 1 423 284 52 82 chr2 229564405 229564567 -23692016 + L1MDb LINE L1 1805 1950 -4637 1247 226 97 83 chr2 229564568 229564608 -23691975 - L1MEc LINE L1 -2018 4197 4159 1879 184 15 3 chr2 229564608 229564944 -23691639 - MER2 DNA MER2_type -4 340 1 1247 226 97 83 chr2 229564944 229564978 -23691605 - L1MEc LINE L1 -2056 4159 4127 2212 126 0 3 chr2 229564978 229565280 -23691303 - AluSx SINE Alu -11 301 1 1247 226 97 83 chr2 229565280 229565411 -23691172 - L1MEc LINE L1 -2088 4127 3999 2364 115 0 0 chr2 229565411 229565715 -23690868 - AluSq SINE Alu -9 304 1 1247 226 97 83 chr2 229565715 229566095 -23690488 - L1MEc LINE L1 -2216 3999 3602 2270 92 14 14 chr2 229566110 229566404 -23690179 - AluSx SINE Alu -18 294 1 886 219 111 44 chr2 229566404 229566596 -23689987 - MLT1A2 LTR MaLR -9 423 245 180 0 0 0 chr2 229566596 229566616 -23689967 + (TTC)n Simple_repeat Simple_repeat 2 21 0 886 219 111 44 chr2 229566616 229566767 -23689816 - MLT1A2 LTR MaLR -187 245 1 2519 261 66 35 chr2 229566791 229567672 -23688911 - L1MEc LINE L1 -2633 3582 2729 2247 103 0 3 chr2 229567672 229567962 -23688621 + AluSx SINE Alu 1 289 -23 213 39 0 0 chr2 229567964 229567990 -23688593 + (TTA)n Simple_repeat Simple_repeat 3 28 0 2519 261 66 35 chr2 229567990 229568538 -23688045 - L1MEc LINE L1 -3486 2729 2084 860 268 126 40 chr2 229568860 229569289 -23687294 - L3 LINE CR1 -305 1272 807 2401 101 0 16 chr2 229569431 229569748 -23686835 + AluSx SINE Alu 1 312 0 518 260 170 20 chr2 229570415 229570615 -23685968 + MIR SINE MIR 33 262 0 180 0 0 0 chr2 229571771 229571791 -23684792 + (CAGG)n Simple_repeat Simple_repeat 4 23 0 182 330 81 61 chr2 229574874 229575071 -23681512 + L2 LINE L2 3053 3253 -19 804 252 43 13 chr2 229575107 229575337 -23681246 - MIR SINE MIR -13 249 13 192 317 59 30 chr2 229575419 229575520 -23681063 + L2 LINE L2 3168 3271 -1 278 250 25 8 chr2 229576108 229576228 -23680355 + (CCCCAG)n Simple_repeat Simple_repeat 2 123 0 2056 121 23 0 chr2 229579011 229579316 -23677267 - AluSx SINE Alu 0 312 1 255 313 25 0 chr2 229580365 229580445 -23676138 + MIR SINE MIR 177 258 -4 1479 194 30 16 chr2 229580808 229581112 -23675471 + AluJo SINE Alu 5 312 0 1555 219 124 27 chr2 229583496 229584044 -23672539 + MER20B DNA MER1_type 16 616 -167 1958 125 17 0 chr2 229584107 229584404 -23672179 - AluSx SINE Alu 0 312 11 1303 168 88 4 chr2 229587086 229587360 -23669223 - AluJb SINE Alu -11 301 5 1237 103 0 17 chr2 229587505 229587679 -23668904 - AluSx SINE Alu -141 171 1 331 214 0 26 chr2 229587705 229587789 -23668794 + AluJ/monomer SINE Alu 1 47 -254 1304 97 11 0 chr2 229587789 229587965 -23668618 + AluSg/x SINE Alu 117 294 -16 524 262 42 36 chr2 229590535 229590694 -23665889 - MER91A DNA MER1_type -10 186 24 2526 37 0 3 chr2 229590694 229590994 -23665589 + AluY SINE Alu 1 299 -12 1047 288 69 24 chr2 229592087 229592549 -23664034 + L2 LINE L2 2831 3313 0 2315 85 0 0 chr2 229596403 229596698 -23659885 - AluSc SINE Alu -14 295 1 2041 115 28 0 chr2 229596698 229596985 -23659598 - AluSx SINE Alu -17 295 1 1741 151 7 7 chr2 229598311 229598602 -23657981 - AluSx SINE Alu -21 291 1 261 336 52 33 chr2 229598676 229598887 -23657696 - L1MC4a LINE L1 -1875 5933 5719 2065 114 3 0 chr2 229601240 229601530 -23655053 + AluSx SINE Alu 1 291 -21 297 239 0 0 chr2 229602109 229602226 -23654357 + C-rich Low_complexity Low_complexity 1 117 0 442 277 61 20 chr2 229604114 229604262 -23652321 - MIR SINE MIR -30 232 79 214 315 43 22 chr2 229606693 229606773 -23649810 + L2 LINE L2 3156 3237 -35 355 253 66 11 chr2 229606773 229606864 -23649719 - MER5A DNA MER1_type -2 187 92 930 150 22 61 chr2 229606950 229607130 -23649453 - AluJb SINE Alu -139 173 1 2148 89 10 3 chr2 229607137 229607428 -23649155 - AluSg SINE Alu -17 293 1 846 135 40 0 chr2 229607618 229607744 -23648839 + FLAM_C SINE Alu 3 133 0 2629 138 13 62 chr2 229607920 229607960 -23648623 - MSTB LTR MaLR 0 426 386 1621 180 10 20 chr2 229607960 229608260 -23648323 + AluJo SINE Alu 2 298 -14 2629 138 13 62 chr2 229608260 229608610 -23647973 - MSTB LTR MaLR -40 386 58 2454 72 0 0 chr2 229608610 229608916 -23647667 - AluY SINE Alu 0 311 6 2629 138 13 62 chr2 229608916 229608972 -23647611 - MSTB LTR MaLR -368 58 1 1083 126 0 0 chr2 229609641 229609792 -23646791 + AluSq/x SINE Alu 1 151 -161 353 239 69 88 chr2 229609857 229609930 -23646653 - MIR SINE MIR -21 241 168 2527 65 0 0 chr2 229609930 229610239 -23646344 + AluY SINE Alu 1 309 -2 353 239 69 88 chr2 229610239 229610324 -23646259 - MIR SINE MIR -94 168 86 692 238 42 40 chr2 229610553 229610906 -23645677 - L1MDa LINE L1 -4029 2511 2158 809 154 96 0 chr2 229610906 229611042 -23645541 - FRAM SINE Alu -12 164 16 1335 158 5 0 chr2 229611068 229611283 -23645300 - AluJb SINE Alu -12 300 85 849 164 0 15 chr2 229611285 229611419 -23645164 - AluJo/FLAM SINE Alu -170 132 1 1101 129 17 108 chr2 229611419 229611659 -23644924 - AluJb SINE Alu -10 302 85 1988 205 64 32 chr2 229611659 229612407 -23644176 - L1MDa LINE L1 -4381 2159 1315 447 307 97 27 chr2 229612436 229612693 -23643890 - L2 LINE L2 -461 2853 2579 663 333 37 35 chr2 229614030 229614484 -23642099 + L1ME LINE L1 67 521 -5549 428 231 13 0 chr2 229614758 229614836 -23641747 - AluJb SINE Alu -231 81 3 1025 153 230 20 chr2 229614995 229615116 -23641467 + AluJb SINE Alu 1 95 -217 207 0 0 0 chr2 229615116 229615139 -23641444 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1025 153 230 20 chr2 229615139 229615265 -23641318 + AluJb SINE Alu 95 300 -12 241 219 48 116 chr2 229615277 229615423 -23641160 - L2 LINE L2 -721 2593 2458 1067 200 5 11 chr2 229618234 229618424 -23638159 + MER5A DNA MER1_type 1 189 0 216 228 18 18 chr2 229618528 229618585 -23637998 - MIR SINE MIR -27 235 179 333 277 78 28 chr2 229618900 229619041 -23637542 + MER117 DNA MER1_type 48 195 -2 484 240 75 20 chr2 229619787 229619933 -23636650 - MIR3 SINE MIR -47 161 8 707 322 109 16 chr2 229620015 229620437 -23636146 - L2 LINE L2 -288 3025 2564 1820 125 61 14 chr2 229621693 229621829 -23634754 + AluSx SINE Alu 1 129 -183 2043 123 7 0 chr2 229621829 229622130 -23634453 + AluSx SINE Alu 1 303 -9 1820 125 61 14 chr2 229622130 229622289 -23634294 + AluSx SINE Alu 129 310 -2 1743 136 0 4 chr2 229622695 229622977 -23633606 - AluSx SINE Alu 0 307 27 1930 159 0 13 chr2 229623537 229623709 -23632874 - AluSx SINE Alu -7 305 137 2297 98 0 0 chr2 229623709 229624014 -23632569 - AluSx SINE Alu -7 305 1 1930 159 0 13 chr2 229624014 229624150 -23632433 - AluSx SINE Alu -175 137 1 1293 174 27 5 chr2 229624725 229624944 -23631639 + MER58A DNA MER1_type 1 224 0 1786 152 0 0 chr2 229625051 229625342 -23631241 - AluJb SINE Alu 0 304 14 2262 85 3 0 chr2 229625505 229625799 -23630784 + AluSq SINE Alu 1 295 -18 1617 182 3 19 chr2 229626099 229626406 -23630177 - AluJb SINE Alu 0 312 11 1826 164 0 0 chr2 229626419 229626706 -23629877 - AluSx SINE Alu -20 292 6 2176 108 0 7 chr2 229627184 229627490 -23629093 - AluSx SINE Alu -8 304 1 2559 74 7 0 chr2 229628726 229629036 -23627547 - AluSp SINE Alu -1 312 1 222 286 22 0 chr2 229629102 229629193 -23627390 + L2 LINE L2 3134 3226 -87 2018 144 0 14 chr2 229629437 229629755 -23626828 - AluSx SINE Alu 0 314 1 295 335 77 21 chr2 229630241 229630435 -23626148 + L2 LINE L2 3105 3309 -4 1914 129 0 0 chr2 229630513 229630769 -23625814 - AluSx SINE Alu -56 256 1 440 291 44 48 chr2 229631018 229631224 -23625359 - MIR3 SINE MIR -3 205 1 294 73 0 0 chr2 229632435 229632476 -23624107 + (TTCTC)n Simple_repeat Simple_repeat 5 45 0 967 357 70 32 chr2 229632790 229633293 -23623290 + L2 LINE L2 2064 2605 -709 2191 109 3 3 chr2 229633293 229633586 -23622997 - AluSx SINE Alu -19 293 1 967 357 70 32 chr2 229633586 229633811 -23622772 + L2 LINE L2 2605 2820 -494 2360 235 54 49 chr2 229633818 229634644 -23621939 + L2 LINE L2 2163 3015 -298 1792 166 113 101 chr2 229634644 229634705 -23621878 - MLT1F1 LTR MaLR 0 567 508 2431 91 0 10 chr2 229634705 229635014 -23621569 + AluY SINE Alu 1 306 -5 1792 166 113 101 chr2 229635014 229635302 -23621281 - MLT1F1 LTR MaLR -59 508 206 2388 106 3 0 chr2 229635302 229635604 -23620979 + AluSx SINE Alu 6 308 -4 1792 166 113 101 chr2 229635604 229635800 -23620783 - MLT1F1 LTR MaLR -361 206 14 776 214 24 121 chr2 229635836 229636168 -23620415 + L2 LINE L2 3013 3312 -1 246 32 0 0 chr2 229637082 229637113 -23619470 + (T)n Simple_repeat Simple_repeat 1 31 0 37 39 0 0 chr2 229637688 229637739 -23618844 + AT_rich Low_complexity Low_complexity 1 51 0 2221 134 0 0 chr2 229637781 229638086 -23618497 + AluSx SINE Alu 1 305 -7 2257 123 0 0 chr2 229638101 229638401 -23618182 + AluSx SINE Alu 7 306 -6 186 43 0 0 chr2 229638842 229638865 -23617718 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 635 139 0 19 chr2 229638871 229638979 -23617604 - FLAM_C SINE Alu -26 117 12 2214 118 0 7 chr2 229639064 229639360 -23617223 - AluSx SINE Alu -18 294 1 2230 67 11 11 chr2 229639625 229639908 -23616675 - AluSq SINE Alu -10 303 21 189 0 0 0 chr2 229639927 229639948 -23616635 + (A)n Simple_repeat Simple_repeat 1 21 0 2372 84 14 0 chr2 229639948 229640245 -23616338 + AluY SINE Alu 1 301 -10 920 221 20 0 chr2 229640246 229640441 -23616142 - MLT1D LTR MaLR -97 408 210 864 157 15 0 chr2 229640448 229640582 -23616001 - AluJo SINE Alu -176 136 1 1212 116 19 42 chr2 229640588 229640803 -23615780 - MLT1D LTR MaLR -293 212 3 320 353 53 27 chr2 229640818 229640968 -23615615 - L2 LINE L2 -4 3268 3115 218 259 139 56 chr2 229641033 229641141 -23615442 - MIR SINE MIR -58 204 88 1594 170 6 58 chr2 229641617 229641753 -23614830 + AluJo SINE Alu 1 142 -170 2127 123 20 0 chr2 229641753 229642055 -23614528 + AluSp SINE Alu 1 308 -5 1594 170 6 58 chr2 229642055 229642247 -23614336 + AluJo SINE Alu 142 312 0 286 256 99 32 chr2 229642491 229642622 -23613961 - MIR3 SINE MIR -67 141 15 404 283 234 0 chr2 229650849 229651054 -23605529 - MIR SINE MIR 0 262 10 474 279 7 7 chr2 229652195 229652331 -23604252 + MIR SINE MIR 13 148 -114 692 221 107 33 chr2 229652331 229652575 -23604008 + MIR SINE MIR 1 262 0 312 250 185 0 chr2 229652888 229652996 -23603587 - L2 LINE L2 0 3272 3145 551 207 146 67 chr2 229652999 229653096 -23603487 - MER5A DNA MER1_type -3 186 98 2326 104 7 0 chr2 229653096 229653226 -23603357 - AluSx SINE Alu -1 311 183 330 26 0 0 chr2 229653226 229653265 -23603318 + (CCCCCA)n Simple_repeat Simple_repeat 4 42 0 2326 104 7 0 chr2 229653265 229653443 -23603140 - AluSx SINE Alu -129 183 1 551 207 146 67 chr2 229653443 229653509 -23603074 - MER5A DNA MER1_type -91 98 10 243 348 104 9 chr2 229654847 229654962 -23601621 - L2 LINE L2 -10 3262 3137 1976 141 0 13 chr2 229654979 229655278 -23601305 + AluSx SINE Alu 1 295 -17 1456 235 57 39 chr2 229655278 229655716 -23600867 + L2 LINE L2 2511 2956 -358 236 87 0 0 chr2 229655787 229655833 -23600750 - LTR66 LTR ERVL -171 439 394 189 0 0 0 chr2 229655833 229655854 -23600729 + (CA)n Simple_repeat Simple_repeat 2 22 0 2500 76 3 0 chr2 229655864 229656167 -23600416 - AluY SINE Alu -6 305 2 2040 121 10 10 chr2 229656171 229656468 -23600115 - AluSx SINE Alu -15 297 1 2318 90 7 7 chr2 229656504 229656805 -23599778 - AluSq SINE Alu -12 301 1 2348 105 0 3 chr2 229660201 229660506 -23596077 + AluSx SINE Alu 1 304 -8 219 288 273 14 chr2 229664257 229664396 -23592187 - MIR SINE MIR -56 206 32 2460 93 0 6 chr2 229665573 229665886 -23590697 + AluY SINE Alu 1 311 0 2241 92 14 0 chr2 229666233 229666516 -23590067 + AluSx SINE Alu 6 292 -20 228 35 0 0 chr2 229667665 229667694 -23588889 + (CCGAG)n Simple_repeat Simple_repeat 5 33 0 29 0 0 0 chr2 229667834 229667863 -23588720 + GC_rich Low_complexity Low_complexity 1 29 0 33 0 0 0 chr2 229667896 229667929 -23588654 + GC_rich Low_complexity Low_complexity 1 33 0 1963 134 21 0 chr2 229669742 229670032 -23586551 - AluSx SINE Alu -16 296 1 597 289 61 8 chr2 229670064 229670310 -23586273 - MIR SINE MIR -2 260 2 2209 102 17 14 chr2 229670568 229670863 -23585720 - AluSq SINE Alu -17 296 1 385 233 107 9 chr2 229670867 229671080 -23585503 - L1MC/D LINE L1 -743 5403 5200 408 266 72 123 chr2 229671283 229671851 -23584732 - LTR67 LTR ERVL 0 557 19 286 253 163 62 chr2 229672494 229672672 -23583911 - L2 LINE L2 0 3313 3118 972 173 5 49 chr2 229672830 229673015 -23583568 - AluJo SINE Alu -133 179 3 2218 90 18 0 chr2 229673022 229673353 -23583230 - AluSx SINE Alu 0 336 1 338 314 88 34 chr2 229673411 229673615 -23582968 - MIR SINE MIR -28 234 20 678 239 0 0 chr2 229673809 229673943 -23582640 + FLAM_C SINE Alu 2 135 -8 454 252 88 129 chr2 229674063 229674519 -23582064 + L1MC4 LINE L1 5494 5930 -1878 229 238 0 16 chr2 229674519 229674582 -23582001 + (TA)n Simple_repeat Simple_repeat 1 62 0 366 133 49 14 chr2 229675098 229675241 -23581342 + (TTATA)n Simple_repeat Simple_repeat 3 150 0 672 148 0 17 chr2 229675546 229675661 -23580922 + FLAM_C SINE Alu 14 126 -17 183 114 0 0 chr2 229675663 229675698 -23580885 + (TTTTTA)n Simple_repeat Simple_repeat 2 36 0 28 29 0 0 chr2 229675698 229675733 -23580850 + AT_rich Low_complexity Low_complexity 1 35 0 2379 72 10 10 chr2 229675891 229676197 -23580386 + AluY SINE Alu 1 306 -5 2312 75 4 4 chr2 229676218 229676530 -23580053 + AluY SINE Alu 1 312 0 448 294 112 10 chr2 229676843 229677040 -23579543 + MIR SINE MIR 29 245 -17 272 364 78 0 chr2 229677035 229677164 -23579419 + L2 LINE L2 2667 2805 -509 * 209 347 161 12 chr2 229677282 229677524 -23579059 + L2 LINE L2 2994 3271 -1 192 77 0 0 chr2 229678343 229678369 -23578214 + (TC)n Simple_repeat Simple_repeat 2 27 0 432 0 0 0 chr2 229678369 229678417 -23578166 + (CA)n Simple_repeat Simple_repeat 1 48 0 232 246 31 15 chr2 229679359 229679424 -23577159 + Charlie4 DNA MER1_type 1892 1957 -4 440 259 0 69 chr2 229679857 229679988 -23576595 + L1MC4 LINE L1 6582 6703 -1339 213 235 139 78 chr2 229681367 229681533 -23575050 + MIR3 SINE MIR 10 185 -23 182 276 235 20 chr2 229681921 229682019 -23574564 + L2 LINE L2 3192 3310 -3 1013 141 41 77 chr2 229683092 229683312 -23573271 - MER20 DNA MER1_type -2 217 6 204 309 51 51 chr2 229683362 229683540 -23573043 + L2 LINE L2 2919 3096 -176 186 178 133 0 chr2 229683604 229683649 -23572934 + L2 LINE L2 3263 3313 0 2296 95 0 29 chr2 229684052 229684368 -23572215 - AluSx SINE Alu 0 312 6 312 27 0 0 chr2 229684466 229684503 -23572080 + (TCCA)n Simple_repeat Simple_repeat 1 37 0 326 308 39 15 chr2 229684757 229684887 -23571696 + L2 LINE L2 2974 3106 -207 1117 90 0 0 chr2 229685445 229685579 -23571004 - AluSq/x SINE Alu -179 134 1 2594 269 90 6 chr2 229685586 229686427 -23570156 + L2 LINE L2 1210 2121 -1193 583 211 15 15 chr2 229686440 229686573 -23570010 - AluSq/x SINE Alu -178 134 2 288 181 223 0 chr2 229686573 229686667 -23569916 + L2 LINE L2 2096 2210 -1104 234 240 53 40 chr2 229686997 229687072 -23569511 - L2 LINE L2 -30 3283 3208 466 311 25 10 chr2 229687261 229687422 -23569161 + MER5A DNA MER1_type 2 174 -15 2459 85 0 0 chr2 229688141 229688436 -23568147 - AluSx SINE Alu -17 295 1 310 356 89 7 chr2 229688460 229688595 -23567988 - L2 LINE L2 0 3272 3127 * 420 246 56 28 chr2 229688581 229688723 -23567860 - MIR SINE MIR 0 262 117 247 108 0 0 chr2 229688732 229688769 -23567814 + MER63 DNA MER1_type 3 39 -397 658 196 0 43 chr2 229688769 229688907 -23567676 + FLAM_C SINE Alu 1 132 -1 1310 133 0 0 chr2 229688916 229689089 -23567494 + AluSx SINE Alu 3 175 -137 649 215 54 39 chr2 229689089 229689294 -23567289 + L2 LINE L2 2191 2398 -916 866 138 0 0 chr2 229689306 229689446 -23567137 + AluSx SINE Alu 167 306 0 641 206 30 8 chr2 229689449 229689580 -23567003 + MER63 DNA MER1_type 26 785 -277 352 229 24 0 chr2 229689636 229689719 -23566864 - MIR SINE MIR -177 85 1 993 222 124 7 chr2 229689894 229690080 -23566503 - L1MD2 LINE L1 -12 6347 6184 745 107 154 35 chr2 229690080 229690192 -23566391 + MER53 DNA DNA 1 141 -48 2329 111 0 3 chr2 229690192 229690499 -23566084 - AluSx SINE Alu -6 306 1 745 107 154 35 chr2 229690499 229690555 -23566028 + MER53 DNA DNA 141 189 0 993 222 124 7 chr2 229690555 229690816 -23565767 - L1MD2 LINE L1 -175 6184 5793 213 274 0 0 chr2 229690854 229690905 -23565678 - L2 LINE L2 -1 3312 3262 501 206 20 0 chr2 229691092 229691194 -23565389 - L2 LINE L2 -799 2515 2412 2668 133 49 24 chr2 229691195 229691556 -23565027 + LTR32 LTR ERVL 9 385 -86 2221 98 28 0 chr2 229691556 229691843 -23564740 + AluSx SINE Alu 1 295 -17 2668 133 49 24 chr2 229691843 229691933 -23564650 + LTR32 LTR ERVL 385 471 0 369 261 52 8 chr2 229691933 229692067 -23564516 - L2 LINE L2 -905 2409 2270 2301 77 3 0 chr2 229692172 229692472 -23564111 + THE1A LTR MaLR 55 355 0 774 249 46 5 chr2 229692690 229692887 -23563696 + MIR SINE MIR 37 241 -21 2177 114 18 15 chr2 229692951 229693285 -23563298 + MER1B DNA MER1_type 1 335 -2 186 273 0 0 chr2 229693802 229693846 -23562737 - L2 LINE L2 0 3313 3270 460 224 243 0 chr2 229693865 229694017 -23562566 - MER5A DNA MER1_type 0 189 1 233 234 154 55 chr2 229694172 229694230 -23562353 + L2 LINE L2 3030 3081 -232 243 0 0 0 chr2 229694230 229694257 -23562326 + (CA)n Simple_repeat Simple_repeat 1 27 0 233 234 154 55 chr2 229694257 229694399 -23562184 + L2 LINE L2 3081 3250 -63 668 238 72 89 chr2 229694421 229694782 -23561801 + LTR4 LTR ERV1 3 357 -239 573 258 153 24 chr2 229694869 229695117 -23561466 + LTR4 LTR ERV1 317 596 0 268 185 37 0 chr2 229695117 229695171 -23561412 + L2 LINE L2 3207 3262 -10 866 269 8 76 chr2 229695193 229695561 -23561022 - L2 LINE L2 -16 3297 2955 659 187 49 0 chr2 229695577 229695700 -23560883 + MER3 DNA MER1_type 1 129 -80 546 57 0 0 chr2 229695701 229695771 -23560812 + (TTTC)n Simple_repeat Simple_repeat 2 71 0 491 165 13 0 chr2 229695779 229695858 -23560725 - AluJo SINE Alu -57 255 176 488 162 0 0 chr2 229695897 229695971 -23560612 - AluJo SINE Alu -138 174 101 1693 98 70 60 chr2 229695971 229696286 -23560297 + THE1C LTR MaLR 2 319 -56 243 164 36 36 chr2 229696287 229696342 -23560241 - AluSg/x SINE Alu -133 167 113 1240 268 38 8 chr2 229696400 229696792 -23559791 - L2 LINE L2 -413 2901 2498 186 194 0 0 chr2 229696800 229696836 -23559747 - L2 LINE L2 -15 3298 3263 282 294 114 59 chr2 229697890 229698179 -23558404 - MLT1K LTR MaLR 0 588 284 1611 175 20 29 chr2 229698787 229699129 -23557454 + MER63B DNA MER1_type 8 346 -90 10247 221 28 52 chr2 229699147 229699975 -23556608 - L1MC4 LINE L1 -130 6506 5660 2452 107 0 0 chr2 229699975 229700285 -23556298 - AluSg SINE Alu 0 310 1 10247 221 28 52 chr2 229700285 229701119 -23555464 - L1MC4 LINE L1 -976 5660 4808 2114 178 54 2 chr2 229701119 229701524 -23555059 + MSTB LTR MaLR 1 426 0 10247 221 28 52 chr2 229701524 229702568 -23554015 - L1MC4 LINE L1 -1828 4808 3741 831 198 0 52 chr2 229702568 229702740 -23553843 - FRAM SINE Alu -3 163 1 10247 221 28 52 chr2 229702740 229702902 -23553681 - L1MC4 LINE L1 -2895 3741 3577 244 51 0 0 chr2 229702902 229702941 -23553642 - AluSx SINE Alu 0 308 270 1843 97 0 0 chr2 229702941 229703169 -23553414 - AluSx SINE Alu -84 228 1 10247 221 28 52 chr2 229703169 229704064 -23552519 - L1MC4 LINE L1 -3057 3579 2774 2189 234 38 22 chr2 229704058 229704127 -23552456 - L1MC4 LINE L1 -5898 642 576 * 3169 114 47 4 chr2 229704127 229704617 -23551966 - MER9 LTR ERVK 0 511 1 2189 234 38 22 chr2 229704617 229705081 -23551502 - L1MC4 LINE L1 -5964 576 101 456 182 111 0 chr2 229705113 229705212 -23551371 + MER63B DNA MER1_type 326 435 -1 293 273 58 72 chr2 229705258 229705397 -23551186 + LTR67 LTR ERVL 101 237 -320 379 283 83 0 chr2 229705517 229705637 -23550946 + LTR67 LTR ERVL 428 557 0 313 295 62 18 chr2 229707508 229707620 -23548963 - MIR3 SINE MIR -90 118 2 1205 141 70 5 chr2 229707716 229707929 -23548654 - L1PA8 LINE L1 0 6172 5946 206 191 85 0 chr2 229708130 229708177 -23548406 + MER5B DNA MER1_type 1 51 -127 869 137 38 0 chr2 229708220 229708351 -23548232 + AluJo SINE Alu 1 136 -176 306 354 0 0 chr2 229708375 229708457 -23548126 + MER5B DNA MER1_type 93 174 -4 2327 102 85 71 chr2 229708530 229708577 -23548006 - MSTA LTR MaLR 0 428 383 2437 112 0 0 chr2 229708577 229708889 -23547694 + AluSx SINE Alu 1 312 0 2327 102 85 71 chr2 229708889 229709263 -23547320 - MSTA LTR MaLR -45 383 1 287 190 17 0 chr2 229709451 229709509 -23547074 + MER113 DNA MER1_type? 463 521 0 842 76 8 0 chr2 229709631 229709750 -23546833 + L1PB1 LINE L1 6030 6149 -2 21 36 0 0 chr2 229709750 229709778 -23546805 + AT_rich Low_complexity Low_complexity 1 28 0 232 245 157 10 chr2 229710132 229710234 -23546349 - L2 LINE L2 -35 3237 3121 2292 161 45 14 chr2 229712985 229713427 -23543156 + LTR32 LTR ERVL 13 468 -3 200 305 17 0 chr2 229715040 229715099 -23541484 - MER91A DNA MER1_type -136 60 1 468 254 26 106 chr2 229715119 229715308 -23541275 - MIR SINE MIR -41 221 48 2482 42 3 3 chr2 229716100 229716387 -23540196 + AluY SINE Alu 13 299 -12 234 82 106 0 chr2 229718875 229718960 -23537623 + (CA)n Simple_repeat Simple_repeat 1 94 0 624 89 55 7 chr2 229718977 229719123 -23537460 + (CA)n Simple_repeat Simple_repeat 1 153 0 371 253 84 84 chr2 229721968 229722122 -23534461 + MER91B DNA MER1_type 2 155 -35 360 234 180 9 chr2 229723140 229723251 -23533332 + L3 LINE CR1 1362 1491 -86 239 293 0 0 chr2 229724497 229724555 -23532028 - MIR SINE MIR -65 143 86 249 281 238 19 chr2 229725685 229725845 -23530738 + L3 LINE CR1 1270 1464 -113 215 299 8 60 chr2 229726330 229726447 -23530136 + CT-rich Low_complexity Low_complexity 4 114 0 201 121 0 0 chr2 229726956 229726989 -23529594 + (TCC)n Simple_repeat Simple_repeat 1 33 0 21 0 0 0 chr2 229728247 229728268 -23528315 + GC_rich Low_complexity Low_complexity 1 21 0 297 0 0 0 chr2 229728756 229728789 -23527794 + (CCG)n Simple_repeat Simple_repeat 1 33 0 33 25 0 0 chr2 229728823 229728863 -23527720 + GC_rich Low_complexity Low_complexity 1 40 0 269 322 54 7 chr2 229729115 229729264 -23527319 + MIR3 SINE MIR 45 200 -8 1598 180 136 71 chr2 229729916 229730074 -23526509 + MLT1C LTR MaLR 1 147 -320 2311 84 28 0 chr2 229730074 229730360 -23526223 + AluSx SINE Alu 1 294 -18 1598 180 136 71 chr2 229730360 229730635 -23525948 + MLT1C LTR MaLR 147 462 -5 460 285 140 17 chr2 229731778 229731957 -23524626 + LTR67 LTR ERVL 5 205 -352 466 289 35 17 chr2 229732390 229732563 -23524020 - MIR SINE MIR -53 209 34 2307 116 10 0 chr2 229732618 229732921 -23523662 - AluSx SINE Alu -6 306 1 859 256 104 0 chr2 229733048 229733278 -23523305 + MIR SINE MIR 4 257 -5 221 230 27 40 chr2 229733746 229733820 -23522763 + MIR SINE MIR 190 262 0 248 281 193 64 chr2 229734462 229734757 -23521826 - L2 LINE L2 -60 3253 2921 2239 116 3 0 chr2 229734864 229735158 -23521425 + AluSx SINE Alu 1 295 -17 282 281 187 32 chr2 229735203 229735393 -23521190 + MIR SINE MIR 3 219 -43 304 299 47 47 chr2 229735475 229735602 -23520981 + L2 LINE L2 3138 3264 -8 2321 98 17 0 chr2 229735802 229736099 -23520484 - AluSx SINE Alu -10 302 1 2391 97 0 7 chr2 229736166 229736474 -23520109 - AluSx SINE Alu -6 306 1 32 26 0 0 chr2 229737021 229737060 -23519523 + AT_rich Low_complexity Low_complexity 1 39 0 2313 86 14 0 chr2 229738151 229738442 -23518141 - AluY SINE Alu -16 295 1 26 30 0 0 chr2 229738637 229738670 -23517913 + AT_rich Low_complexity Low_complexity 1 33 0 582 261 117 69 chr2 229739029 229739405 -23517178 - MLT1K LTR MaLR -4 584 191 380 285 110 2 chr2 229740503 229740666 -23515917 + MIR SINE MIR 17 190 -68 542 290 18 12 chr2 229742678 229742901 -23513682 + C-rich Low_complexity Low_complexity 1 224 0 412 338 0 0 chr2 229742914 229743110 -23513473 + C-rich Low_complexity Low_complexity 1 196 0 373 330 138 25 chr2 229743386 229743921 -23512662 + L2 LINE L2 2622 3222 -50 224 325 103 26 chr2 229743988 229744182 -23512401 - MIR SINE MIR -33 229 21 525 272 37 0 chr2 229745100 229745236 -23511347 + MIR SINE MIR 28 168 -94 267 284 86 26 chr2 229745493 229745609 -23510974 - MIR SINE MIR -32 230 108 2529 63 10 0 chr2 229745618 229745918 -23510665 + AluY SINE Alu 1 303 -8 433 165 10 10 chr2 229747903 229748006 -23508577 + CT-rich Low_complexity Low_complexity 3 105 0 1998 147 3 25 chr2 229748623 229748942 -23507641 - AluJo SINE Alu 0 312 1 543 156 0 0 chr2 229750728 229750810 -23505773 + MER67A LTR ERV1 2 83 -460 1265 198 63 31 chr2 229750810 229751187 -23505396 + MER67A LTR ERV1 3 417 -126 2390 108 0 0 chr2 229751187 229751494 -23505089 + AluSq SINE Alu 1 307 -6 1395 232 25 43 chr2 229751527 229751924 -23504659 + MER67A-int LTR ERV1 4521 4910 -26 444 200 0 0 chr2 229751924 229752004 -23504579 + MER67A LTR ERV1 7 86 -457 1930 166 62 55 chr2 229752060 229752497 -23504086 + MER67A LTR ERV1 31 503 -40 2380 102 0 3 chr2 229752497 229752800 -23503783 + AluSg SINE Alu 1 302 -8 1930 166 62 55 chr2 229752800 229752842 -23503741 + MER67A LTR ERV1 503 543 0 303 258 124 82 chr2 229752902 229752975 -23503608 - MIR SINE MIR -32 230 161 2512 95 0 0 chr2 229752975 229753280 -23503303 + AluSx SINE Alu 1 305 -7 303 258 124 82 chr2 229753280 229753400 -23503183 - MIR SINE MIR -101 161 29 644 273 65 9 chr2 229755794 229755919 -23500664 - L1MD3 LINE L1 -25 7970 7853 1514 107 33 139 chr2 229755919 229756256 -23500327 + AluSx SINE Alu 2 302 0 644 273 65 9 chr2 229756256 229756281 -23500302 - L1MD3 LINE L1 -142 7853 7831 2350 90 0 13 chr2 229756281 229756580 -23500003 + AluSg SINE Alu 1 295 -15 644 273 65 9 chr2 229756580 229756717 -23499866 - L1MD3 LINE L1 -164 7831 6020 2341 120 0 0 chr2 229756928 229757237 -23499346 + AluSx SINE Alu 1 309 -3 283 311 161 6 chr2 229757293 229757454 -23499129 - MIR SINE MIR -4 258 73 283 298 200 14 chr2 229757586 229757801 -23498782 - MIR SINE MIR 0 262 8 270 286 84 19 chr2 229758965 229759124 -23497459 - MIR SINE MIR -62 200 30 3120 146 107 30 chr2 229759499 229759766 -23496817 + MER39 LTR ERV1 1 246 -461 2272 83 7 0 chr2 229759766 229760056 -23496527 + AluSp SINE Alu 1 292 -21 3120 146 107 30 chr2 229760056 229760445 -23496138 + MER39 LTR ERV1 246 707 0 180 0 0 0 chr2 229760955 229760975 -23495608 + (T)n Simple_repeat Simple_repeat 1 20 0 2357 108 0 0 chr2 229761224 229761529 -23495054 + AluSq SINE Alu 1 305 -8 2527 58 0 0 chr2 229761552 229761846 -23494737 + AluY SINE Alu 1 294 -17 2174 132 30 0 chr2 229762297 229762600 -23493983 + AluSx SINE Alu 1 312 0 968 164 0 0 chr2 229762921 229763061 -23493522 + FRAM SINE Alu 1 137 -39 300 53 0 0 chr2 229763790 229763828 -23492755 + (A)n Simple_repeat Simple_repeat 1 38 0 2466 89 0 0 chr2 229764086 229764389 -23492194 + AluSc SINE Alu 1 303 -6 364 228 28 90 chr2 229764552 229764623 -23491960 - L2 LINE L2 -1 3271 3212 2218 108 3 7 chr2 229764623 229764919 -23491664 + AluSq SINE Alu 1 295 -18 364 228 28 90 chr2 229764919 229764992 -23491591 - L2 LINE L2 -60 3212 3136 956 143 34 29 chr2 229765011 229765186 -23491397 - MLT1D LTR MaLR 0 505 330 1010 145 0 0 chr2 229765187 229765332 -23491251 - AluJ SINE Alu -6 306 162 764 150 0 16 chr2 229765333 229765460 -23491123 + 7SK RNA RNA 1 125 -68 455 90 15 0 chr2 229765496 229765563 -23491020 + 7SK RNA RNA 121 188 -5 1061 176 0 37 chr2 229765563 229765750 -23490833 - AluJ SINE Alu -132 180 1 1224 183 42 90 chr2 229765751 229765969 -23490614 - MLT1D LTR MaLR -166 339 143 2078 162 3 0 chr2 229765969 229766277 -23490306 + AluJb SINE Alu 1 309 -3 1224 183 42 90 chr2 229766277 229766414 -23490169 - MLT1D LTR MaLR -362 143 1 1513 124 9 115 chr2 229766525 229766641 -23489942 - MER44D DNA MER2_type -1883 608 481 1250 118 113 0 chr2 229766641 229766744 -23489839 + MER30 DNA MER1_type 5 95 -135 2414 89 3 0 chr2 229766744 229767047 -23489536 - AluSx SINE Alu -8 304 1 1250 118 113 0 chr2 229767047 229767146 -23489437 + MER30 DNA MER1_type 95 230 0 1513 124 9 115 chr2 229767146 229767197 -23489386 - MER44D DNA MER2_type -2010 481 426 2139 120 10 0 chr2 229767197 229767505 -23489078 + AluSx SINE Alu 1 311 -1 1513 124 9 115 chr2 229767505 229767673 -23488910 - MER44D DNA MER2_type -2065 426 38 2665 146 88 34 chr2 229767673 229767828 -23488755 + MER41C LTR ERV1 1 146 -408 2498 80 3 0 chr2 229767828 229768128 -23488455 - AluY SINE Alu -10 301 1 2665 146 88 34 chr2 229768128 229768374 -23488209 + MER41C LTR ERV1 146 439 -115 1918 125 66 0 chr2 229768374 229768646 -23487937 - AluSx SINE Alu -22 290 1 2665 146 88 34 chr2 229768646 229768769 -23487814 + MER41C LTR ERV1 439 554 0 20638 121 20 15 chr2 229768769 229770763 -23485820 + MER41C-int LTR ERV1 1 1985 -5771 2501 90 3 6 chr2 229770763 229771075 -23485508 + AluSx SINE Alu 1 311 -1 20638 121 20 15 chr2 229771075 229771193 -23485390 + MER41C-int LTR ERV1 1985 2101 -5655 1321 77 28 0 chr2 229771193 229771418 -23485165 + L1PA8 LINE L1 5976 6205 0 20638 121 20 15 chr2 229771418 229772284 -23484299 + MER41C-int LTR ERV1 2101 2999 -4757 2420 108 0 0 chr2 229772284 229772591 -23483992 - AluSx SINE Alu -5 307 1 20638 121 20 15 chr2 229772591 229772825 -23483758 + MER41C-int LTR ERV1 2999 3230 -4526 10009 108 11 17 chr2 229772805 229774229 -23482354 + PRIMA41-int LTR ERV1 5258 6675 -1081 * 2414 74 0 0 chr2 229774229 229774540 -23482043 - AluY SINE Alu 0 311 1 10009 108 11 17 chr2 229774540 229774627 -23481956 + PRIMA41-int LTR ERV1 6675 6761 -995 1561 156 19 12 chr2 229774627 229774883 -23481700 - AluJb SINE Alu -54 258 1 765 272 63 17 chr2 229774937 229775033 -23481550 + MIR SINE MIR 3 93 -169 2358 105 0 0 chr2 229775033 229775337 -23481246 - AluSg SINE Alu -6 304 1 765 272 63 17 chr2 229775337 229775479 -23481104 + MIR SINE MIR 93 252 -10 2289 93 0 0 chr2 229775500 229775809 -23480774 + AluSg SINE Alu 2 310 0 702 189 16 0 chr2 229775833 229775960 -23480623 + FLAM_C SINE Alu 1 129 -4 23 0 0 0 chr2 229775960 229775983 -23480600 + AT_rich Low_complexity Low_complexity 1 23 0 2414 93 3 0 chr2 229776347 229776647 -23479936 + AluSg SINE Alu 1 301 -9 855 191 7 7 chr2 229776775 229776927 -23479656 + AluJb SINE Alu 156 307 -5 743 169 0 23 chr2 229777537 229777667 -23478916 - FLAM_C SINE Alu -11 132 6 269 275 158 17 chr2 229777763 229777883 -23478700 + MLT1K LTR MaLR 379 515 -73 1906 104 86 14 chr2 229777908 229778186 -23478397 - AluSx SINE Alu -14 298 1 363 23 0 0 chr2 229779558 229779602 -23476981 + (CA)n Simple_repeat Simple_repeat 2 45 0 315 260 59 3 chr2 229781841 229781986 -23474597 - L1MC/D LINE L1 -533 5588 5438 2043 161 0 0 chr2 229782009 229782320 -23474263 - AluJo SINE Alu -1 311 1 2018 68 48 41 chr2 229782329 229782624 -23473959 - AluY SINE Alu -14 297 1 290 349 0 0 chr2 229782716 229782802 -23473781 + GA-rich Low_complexity Low_complexity 3 88 0 372 266 172 16 chr2 229782950 229783078 -23473505 - MIR3 SINE MIR -45 163 16 537 303 33 50 chr2 229783427 229783656 -23472927 - MIR SINE MIR -25 237 1 522 113 0 0 chr2 229784266 229784363 -23472220 + (CA)n Simple_repeat Simple_repeat 2 98 0 236 255 0 0 chr2 229784509 229784556 -23472027 + (CTGGGG)n Simple_repeat Simple_repeat 1 47 0 235 235 0 37 chr2 229784968 229785049 -23471534 + C-rich Low_complexity Low_complexity 2 79 0 292 237 114 61 chr2 229786211 229786342 -23470241 - MER5B DNA MER1_type -39 139 2 210 71 0 0 chr2 229787213 229787241 -23469342 + (TTTTC)n Simple_repeat Simple_repeat 3 30 0 2134 97 3 13 chr2 229787269 229787567 -23469016 + AluSx SINE Alu 1 295 -17 422 191 33 138 chr2 229787678 229787830 -23468753 - MIR3 SINE MIR -31 177 42 704 260 43 52 chr2 229789822 229789922 -23466661 - MIR SINE MIR -2 260 161 1605 113 5 0 chr2 229789922 229790144 -23466439 - AluSg/x SINE Alu -14 298 76 704 260 43 52 chr2 229790144 229790274 -23466309 - MIR SINE MIR -101 161 32 292 293 170 20 chr2 229790516 229790663 -23465920 + MER5A DNA MER1_type 7 175 -14 1836 143 34 3 chr2 229791227 229791521 -23465062 - AluSx SINE Alu -7 305 3 195 42 0 0 chr2 229791521 229791545 -23465038 + (TTTC)n Simple_repeat Simple_repeat 2 25 0 650 146 19 10 chr2 229791546 229791649 -23464934 - FLAM_A SINE Alu -28 114 11 519 271 90 27 chr2 229791765 229791953 -23464630 - MIR SINE MIR -6 256 57 202 299 0 58 chr2 229792010 229792097 -23464486 + MER5A DNA MER1_type 3 84 -105 200 253 211 11 chr2 229792041 229792136 -23464447 - MER5A DNA MER1_type -22 167 54 * 256 302 175 8 chr2 229792132 229792258 -23464325 - L3 LINE CR1 -5 1572 1426 349 284 77 82 chr2 229794120 229794241 -23462342 - L2 LINE L2 -10 3303 3182 827 238 115 59 chr2 229794241 229794564 -23462019 + MER102b DNA MER1_type 1 341 0 349 284 77 82 chr2 229794564 229794625 -23461958 - L2 LINE L2 -131 3182 3122 188 355 71 41 chr2 229794716 229794885 -23461698 - L2 LINE L2 -85 3187 3014 574 233 84 6 chr2 229796087 229796260 -23460323 + MIR SINE MIR 75 261 -1 548 236 19 13 chr2 229796260 229796417 -23460166 + MER46C DNA MER2_type 2 159 -179 491 301 39 20 chr2 229796486 229796689 -23459894 + MER46C DNA MER2_type 131 337 -1 202 143 0 24 chr2 229796689 229796731 -23459852 + (TTA)n Simple_repeat Simple_repeat 3 43 0 813 277 44 26 chr2 229797298 229797569 -23459014 - L2 LINE L2 0 3313 3038 496 323 41 10 chr2 229797541 229797736 -23458847 + MIR SINE MIR 48 248 -14 * 593 303 70 5 chr2 229799154 229799339 -23457244 + MIR SINE MIR 2 198 -64 282 230 99 86 chr2 229800678 229800737 -23455846 + MIR SINE MIR 81 138 -124 1643 136 79 4 chr2 229800737 229801002 -23455581 + AluJo SINE Alu 1 285 -27 282 230 99 86 chr2 229801002 229801094 -23455489 + MIR SINE MIR 138 234 -28 * 537 294 73 28 chr2 229801082 229801300 -23455283 - MIR SINE MIR -15 247 20 644 270 96 9 chr2 229802809 229803039 -23453544 - MIR SINE MIR -3 259 10 922 300 134 13 chr2 229807425 229808078 -23448505 + L2 LINE L2 2574 3311 -2 2054 87 56 7 chr2 229809255 229809542 -23447041 + AluSg SINE Alu 1 301 -9 791 274 43 0 chr2 229810694 229810880 -23445703 - MER91A DNA MER1_type -2 194 1 372 282 81 35 chr2 229811089 229811263 -23445320 - MIR SINE MIR -61 201 20 22 0 0 0 chr2 229812657 229812679 -23443904 + GC_rich Low_complexity Low_complexity 1 22 0 197 290 32 43 chr2 229813572 229813665 -23442918 + MIR SINE MIR 49 140 -122 303 240 182 8 chr2 229813753 229813887 -23442696 - MIR SINE MIR -6 202 49 268 268 93 10 chr2 229813958 229814055 -23442528 - MIR SINE MIR -71 191 87 316 293 171 24 chr2 229814765 229814970 -23441613 + MIR SINE MIR 28 262 0 196 324 213 7 chr2 229814945 229815081 -23441502 - MIR SINE MIR -49 213 50 * 216 244 0 0 chr2 229817988 229818029 -23438554 + C-rich Low_complexity Low_complexity 3 43 0 185 346 49 0 chr2 229819875 229819956 -23436627 + L2 LINE L2 3212 3296 -17 2199 128 0 0 chr2 229820244 229820556 -23436027 + AluSx SINE Alu 1 312 0 234 215 0 0 chr2 229820655 229820734 -23435849 + (CA)n Simple_repeat Simple_repeat 1 79 0 632 161 18 6 chr2 229820749 229820917 -23435666 + (CA)n Simple_repeat Simple_repeat 1 170 0 250 179 18 0 chr2 229820936 229820992 -23435591 + (CA)n Simple_repeat Simple_repeat 1 57 0 456 35 0 0 chr2 229821494 229821552 -23435031 + (TGGA)n Simple_repeat Simple_repeat 2 59 0 997 269 82 7 chr2 229821618 229822041 -23434542 + LTR33 LTR ERVL 1 476 -45 1919 155 7 3 chr2 229822256 229822566 -23434017 - AluJb SINE Alu -1 311 1 474 310 132 39 chr2 229822571 229822926 -23433657 + L2 LINE L2 2836 3223 -49 200 209 23 0 chr2 229822938 229822981 -23433602 + (TGGA)n Simple_repeat Simple_repeat 1 44 0 260 258 58 50 chr2 229823054 229823174 -23433409 - MIR3 SINE MIR -84 124 4 272 377 13 0 chr2 229823486 229823640 -23432943 + (CA)n Simple_repeat Simple_repeat 1 156 0 411 286 212 38 chr2 229824687 229824929 -23431654 + L2 LINE L2 2244 2443 -870 1765 165 0 53 chr2 229824929 229825250 -23431333 - AluJb SINE Alu -8 304 1 411 286 212 38 chr2 229825250 229825882 -23430701 + L2 LINE L2 2443 3275 -38 317 270 50 10 chr2 229826576 229826676 -23429907 - MIR SINE MIR -94 168 65 710 229 13 0 chr2 229827069 229827222 -23429361 - MIR SINE MIR -20 242 88 2082 120 0 0 chr2 229827479 229827786 -23428797 + AluSx SINE Alu 3 309 0 2035 106 0 20 chr2 229827802 229828095 -23428488 + AluSg SINE Alu 14 300 -10 198 296 125 23 chr2 229828365 229828453 -23428130 + L2 LINE L2 3123 3219 -53 600 285 34 14 chr2 229828485 229828692 -23427891 - MIR SINE MIR 0 262 52 299 348 36 0 chr2 229830704 229830842 -23425741 - MIR3 SINE MIR -19 189 47 431 326 9 48 chr2 229830866 229831093 -23425490 + MIR SINE MIR 35 252 -10 484 297 36 21 chr2 229831171 229831363 -23425220 + MIR SINE MIR 6 200 -62 336 352 66 11 chr2 229831599 229831781 -23424802 + MIR SINE MIR 52 243 -19 * 740 242 183 5 chr2 229831752 229831971 -23424612 - MIR SINE MIR 0 262 5 184 258 76 30 chr2 229831958 229832024 -23424559 + L2 LINE L2 3197 3265 -7 * 485 229 23 38 chr2 229832040 229832171 -23424412 - L2 LINE L2 -5 3308 3180 1916 137 3 13 chr2 229832194 229832493 -23424090 + AluJo SINE Alu 1 296 -16 35 41 0 0 chr2 229833554 229833603 -23422980 + GC_rich Low_complexity Low_complexity 1 49 0 328 347 14 14 chr2 229833975 229834119 -23422464 - L3b LINE CR1 -315 1268 1125 457 289 30 35 chr2 229835348 229835545 -23421038 + MER102b DNA MER1_type 127 322 -19 997 164 148 6 chr2 229836590 229836773 -23419810 - MER3 DNA MER1_type 0 209 1 520 268 50 50 chr2 229837011 229837142 -23419441 - MIR SINE MIR -1 261 128 2068 73 7 4 chr2 229837142 229837416 -23419167 + AluY SINE Alu 30 304 -7 520 268 50 50 chr2 229837416 229837504 -23419079 - MIR SINE MIR -133 129 42 223 295 16 0 chr2 229837528 229837589 -23418994 - MIR3 SINE MIR -49 159 98 313 301 0 70 chr2 229838086 229838229 -23418354 + L2 LINE L2 3138 3270 -2 246 283 0 61 chr2 229839119 229839218 -23417365 + C-rich Low_complexity Low_complexity 1 93 0 211 273 0 0 chr2 229840222 229840266 -23416317 + (CGTG)n Simple_repeat Simple_repeat 4 47 0 203 184 0 0 chr2 229841784 229841822 -23414761 + (CTG)n Simple_repeat Simple_repeat 2 39 0 225 65 0 0 chr2 229841899 229841930 -23414653 + (CGAG)n Simple_repeat Simple_repeat 4 34 0 245 225 17 67 chr2 229844325 229844445 -23412138 + CT-rich Low_complexity Low_complexity 3 116 0 316 261 0 0 chr2 229849739 229849808 -23406775 + L2 LINE L2 3203 3271 -1 220 343 143 14 chr2 229850349 229850489 -23406094 - MIR3 SINE MIR -7 201 44 253 302 9 9 chr2 229851475 229851581 -23405002 + (CAGAGA)n Simple_repeat Simple_repeat 5 110 0 225 314 96 72 chr2 229852273 229852802 -23403781 + L2 LINE L2 2609 3238 -34 253 264 0 0 chr2 229852802 229852855 -23403728 + (TG)n Simple_repeat Simple_repeat 2 54 0 1949 125 29 0 chr2 229852904 229853185 -23403398 + AluSx SINE Alu 9 297 -15 914 187 0 0 chr2 229853185 229853374 -23403209 + AluJb SINE Alu 134 322 0 361 244 109 64 chr2 229853481 229853637 -23402946 + L2 LINE L2 2919 3081 -191 225 227 121 0 chr2 229854948 229855014 -23401569 + MIR3 SINE MIR 81 154 -54 1166 188 6 136 chr2 229855031 229855383 -23401200 - AluSc SINE Alu -3 306 1 515 266 92 12 chr2 229855564 229855737 -23400846 - MIR SINE MIR -40 222 36 315 222 111 0 chr2 229855932 229856013 -23400570 - MER91C DNA MER1_type -14 126 37 293 313 27 41 chr2 229858696 229858843 -23397740 + MIR SINE MIR 71 215 -47 333 275 12 0 chr2 229858883 229858963 -23397620 + MIR SINE MIR 16 96 -112 249 235 37 49 chr2 229861353 229861434 -23395149 + MIR3 SINE MIR 127 206 -2 1895 116 0 0 chr2 229861948 229862199 -23394384 - AluSx SINE Alu -21 291 41 212 194 42 56 chr2 229863225 229863297 -23393286 + CT-rich Low_complexity Low_complexity 1 71 0 213 295 156 16 chr2 229863805 229863927 -23392656 + MIR SINE MIR 52 190 -72 390 303 25 1 chr2 229864832 229864970 -23391613 + MIR SINE MIR 6 146 -62 22 0 0 0 chr2 229865047 229865069 -23391514 + AT_rich Low_complexity Low_complexity 1 22 0 467 259 121 0 chr2 229865095 229865269 -23391314 + MIR SINE MIR 56 250 -12 684 285 27 36 chr2 229866011 229866232 -23390351 + MIR SINE MIR 13 231 -31 684 285 27 36 chr2 229867090 229867311 -23389272 + MIR SINE MIR 13 231 -31 262 228 0 0 chr2 229869465 229869522 -23387061 + MIR SINE MIR 201 257 -5 366 262 152 24 chr2 229869848 229870012 -23386571 + MIR SINE MIR 78 262 0 204 149 0 43 chr2 229870260 229870307 -23386276 + (TGGGGG)n Simple_repeat Simple_repeat 1 45 0 483 323 87 15 chr2 229871581 229871776 -23384807 + MIR SINE MIR 54 262 0 21 57 0 0 chr2 229873485 229873520 -23383063 + GC_rich Low_complexity Low_complexity 1 35 0 21 57 0 0 chr2 229873836 229873871 -23382712 + GC_rich Low_complexity Low_complexity 1 35 0 229 292 10 42 chr2 229875237 229875333 -23381250 - L2 LINE L2 -40 3232 3140 342 331 55 8 chr2 229875521 229875648 -23380935 + MIR SINE MIR 117 249 -13 577 254 61 0 chr2 229876309 229876474 -23380109 + MER115 DNA AcHobo 46 220 -473 389 216 8 56 chr2 229876511 229876636 -23379947 + MER115 DNA AcHobo 331 449 -244 234 248 248 9 chr2 229877759 229877872 -23378711 + MER91C DNA MER1_type 1 140 0 296 326 0 0 chr2 229878444 229878530 -23378053 + MIR SINE MIR 60 145 -63 693 183 31 68 chr2 229878925 229879116 -23377467 + MIR SINE MIR 69 252 -10 354 218 45 70 chr2 229880798 229880954 -23375629 + Charlie8 DNA MER1_type 72 223 -2194 1723 144 55 10 chr2 229882311 229882603 -23373980 + AluSx SINE Alu 1 305 -7 856 223 48 18 chr2 229882765 229882994 -23373589 + MIR SINE MIR 11 246 -16 2252 112 0 0 chr2 229882996 229883300 -23373283 - AluSq SINE Alu -9 304 1 454 290 14 55 chr2 229883990 229884135 -23372448 - MIR SINE MIR -122 140 2 180 311 117 29 chr2 229886360 229886463 -23370120 + L2 LINE L2 3183 3294 -19 380 278 157 45 chr2 229886485 229886684 -23369899 - MIR SINE MIR -24 238 21 490 279 55 28 chr2 229887033 229887278 -23369305 + MIR SINE MIR 3 251 -11 476 233 203 0 chr2 229887636 229887799 -23368784 - MIR SINE MIR -24 238 43 621 330 10 0 chr2 229889540 229889748 -23366835 - MIR SINE MIR -34 228 16 213 94 0 0 chr2 229890958 229890990 -23365593 + (CAGA)n Simple_repeat Simple_repeat 4 35 0 747 228 0 0 chr2 229891406 229891586 -23364997 + (CA)n Simple_repeat Simple_repeat 1 180 0 201 304 0 0 chr2 229892388 229892444 -23364139 + G-rich Low_complexity Low_complexity 2 57 0 421 308 17 0 chr2 229892593 229892710 -23363873 + MIR3 SINE MIR 81 199 -9 2042 144 0 6 chr2 229893246 229893559 -23363024 - AluJb SINE Alu -1 311 1 21 0 0 0 chr2 229893597 229893618 -23362965 + AT_rich Low_complexity Low_complexity 1 21 0 2240 82 26 7 chr2 229893692 229893998 -23362585 + AluSx SINE Alu 1 312 0 1448 185 4 8 chr2 229894174 229894434 -23362149 - AluJo SINE Alu -16 296 38 1978 150 3 7 chr2 229894468 229894762 -23361821 - AluSx SINE Alu -19 293 1 517 340 27 5 chr2 229898477 229898662 -23357921 + MER5A DNA MER1_type 1 189 0 215 280 0 0 chr2 229898734 229898784 -23357799 - MIR SINE MIR -193 69 20 795 126 0 209 chr2 229898835 229899074 -23357509 - MER5A DNA MER1_type 0 189 1 207 289 124 71 chr2 229899272 229899636 -23356947 - L2 LINE L2 -42 3230 2848 1934 152 7 3 chr2 229899786 229900096 -23356487 - AluSx SINE Alu -1 311 1 2131 132 0 3 chr2 229900458 229900769 -23355814 - AluSg SINE Alu 0 310 1 913 198 15 0 chr2 229901870 229902067 -23354516 - MER3 DNA MER1_type -9 200 1 509 257 111 0 chr2 229902115 229902259 -23354324 + MIR SINE MIR 93 252 -10 2106 124 0 0 chr2 229902270 229902585 -23353998 - AluSx SINE Alu 0 315 1 233 250 0 0 chr2 229902910 229902958 -23353625 + L2 LINE L2 3263 3310 -3 281 248 50 30 chr2 229903993 229904094 -23352489 - MIR SINE MIR -54 208 106 184 391 62 16 chr2 229906792 229906920 -23349663 - L2 LINE L2 -1 3312 3179 508 282 71 24 chr2 229907011 229907181 -23349402 + MIR SINE MIR 57 234 -28 914 237 12 33 chr2 229910464 229910709 -23345874 - MIR SINE MIR 0 262 23 255 61 0 0 chr2 229913620 229913653 -23342930 + (CA)n Simple_repeat Simple_repeat 1 33 0 27 0 0 0 chr2 229914948 229914975 -23341608 + GC_rich Low_complexity Low_complexity 1 27 0 22 35 0 0 chr2 229915160 229915189 -23341394 + GC_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 229915284 229915305 -23341278 + GC_rich Low_complexity Low_complexity 1 21 0 26 30 0 0 chr2 229915347 229915380 -23341203 + GC_rich Low_complexity Low_complexity 1 33 0 216 147 40 13 chr2 229915391 229915466 -23341117 + G-rich Low_complexity Low_complexity 5 81 0 270 81 0 0 chr2 229915502 229915539 -23341044 + (CGG)n Simple_repeat Simple_repeat 2 38 0 394 254 124 53 chr2 229916262 229916431 -23340152 - MIR SINE MIR -1 261 81 605 202 274 12 chr2 229916521 229916689 -23339894 - MIR SINE MIR 0 262 51 616 162 10 0 chr2 229916690 229916789 -23339794 + AluSg/x SINE Alu 177 276 -34 406 0 0 36 chr2 229916792 229916848 -23339735 + (TAAA)n Simple_repeat Simple_repeat 1 54 0 1585 194 0 25 chr2 229916978 229917297 -23339286 - AluJo SINE Alu -1 311 1 308 250 66 121 chr2 229917867 229918123 -23338460 + L2 LINE L2 3055 3296 -17 183 138 0 0 chr2 229918097 229918126 -23338457 + MIR SINE MIR 226 254 -8 * 439 275 110 11 chr2 229918980 229919162 -23337421 + MIR SINE MIR 14 213 -49 200 118 29 0 chr2 229920165 229920199 -23336384 + CT-rich Low_complexity Low_complexity 1 35 0 343 261 17 117 chr2 229920236 229920416 -23336167 + MIR3 SINE MIR 38 199 -9 315 259 118 15 chr2 229922999 229923134 -23333449 + MIR3 SINE MIR 10 158 -50 361 298 144 42 chr2 229923157 229923442 -23333141 - L2 LINE L2 -339 2975 2662 267 290 121 16 chr2 229923459 229923583 -23333000 - MER5A DNA MER1_type -49 140 4 2170 113 3 3 chr2 229923629 229923938 -23332645 + AluSx SINE Alu 1 309 -3 1458 176 7 59 chr2 229923940 229924246 -23332337 + L1MD2 LINE L1 6068 6357 -2 474 231 5 108 chr2 229924498 229924524 -23332059 - L1MC3 LINE L1 -1629 6156 6129 2332 81 3 0 chr2 229924524 229924820 -23331763 - AluSp SINE Alu -16 297 1 474 231 5 108 chr2 229924820 229925005 -23331578 - L1MC3 LINE L1 -1656 6129 5967 361 274 0 0 chr2 229925218 229925291 -23331292 + MIR SINE MIR 79 151 -111 658 240 122 103 chr2 229925332 229925479 -23331104 - L2 LINE L2 0 3313 3170 2257 116 0 0 chr2 229925479 229925789 -23330794 + AluSx SINE Alu 1 310 -2 658 240 122 103 chr2 229925789 229926245 -23330338 - L2 LINE L2 -143 3170 2701 23 0 0 0 chr2 229926253 229926276 -23330307 + AT_rich Low_complexity Low_complexity 1 23 0 294 263 32 21 chr2 229926643 229926739 -23329844 + MIR SINE MIR 20 117 -91 238 211 18 18 chr2 229926774 229926831 -23329752 + L2 LINE L2 3216 3272 0 460 250 0 39 chr2 229926903 229927031 -23329552 - L2 LINE L2 0 3313 3191 2283 60 3 48 chr2 229927404 229927719 -23328864 - AluY SINE Alu -10 301 1 849 139 16 0 chr2 229927732 229927861 -23328722 - FLAM_C SINE Alu 0 133 3 524 298 74 41 chr2 229928045 229928287 -23328296 + L3 LINE CR1 1324 1573 -4 333 378 58 36 chr2 229929105 229929380 -23327203 - L1 LINE L1 -1136 5010 4730 1957 139 10 0 chr2 229929399 229929700 -23326883 - AluJo SINE Alu -8 304 1 233 241 17 78 chr2 229929765 229929881 -23326702 - L1 LINE L1 -1537 4609 4501 1803 172 3 10 chr2 229929957 229930259 -23326324 + AluJb SINE Alu 13 312 0 2287 92 0 0 chr2 229932204 229932499 -23324084 + AluSg SINE Alu 1 295 -15 244 286 77 11 chr2 229932548 229932639 -23323944 + MIR SINE MIR 71 167 -95 2262 83 0 0 chr2 229933684 229933962 -23322621 + AluY SINE Alu 23 300 -11 797 140 0 106 chr2 229934509 229934635 -23321948 - L1ME2 LINE L1 -3 6161 6058 2323 113 0 3 chr2 229934635 229934937 -23321646 + AluSx SINE Alu 1 301 -11 797 140 0 106 chr2 229934937 229934989 -23321594 - L1ME2 LINE L1 -106 6058 6002 201 306 0 24 chr2 229935151 229935236 -23321347 + CT-rich Low_complexity Low_complexity 2 84 0 2470 75 3 0 chr2 229935436 229935731 -23320852 + AluSq SINE Alu 2 297 -16 216 337 24 0 chr2 229936309 229936392 -23320191 - MIR3 SINE MIR -46 162 78 363 280 40 32 chr2 229937519 229937644 -23318939 + L2 LINE L2 3134 3259 -13 202 208 0 19 chr2 229938948 229939001 -23317582 + (CGGG)n Simple_repeat Simple_repeat 4 55 0 180 229 21 21 chr2 229940392 229940440 -23316143 + MIR3 SINE MIR 109 156 -52 475 268 78 0 chr2 229940499 229940641 -23315942 - MIR SINE MIR 0 262 110 271 289 8 33 chr2 229941034 229941155 -23315428 + MLT1K LTR MaLR 156 273 -315 207 0 0 0 chr2 229941355 229941378 -23315205 + (T)n Simple_repeat Simple_repeat 1 23 0 631 281 83 73 chr2 229941425 229941835 -23314748 + MARNA DNA Mariner 93 506 -80 4229 139 19 25 chr2 229942123 229942879 -23313704 - L1MB3 LINE L1 -3 6180 5427 1805 172 13 16 chr2 229942879 229943187 -23313396 - AluJo SINE Alu -5 307 1 4229 139 19 25 chr2 229943187 229943198 -23313385 - L1MB3 LINE L1 -756 5427 5417 902 223 0 0 chr2 229943198 229943364 -23313219 - AluJo SINE Alu -26 286 121 2706 198 15 50 chr2 229943364 229943797 -23312786 - L1M LINE L1 -743 5403 4957 189 0 0 0 chr2 229943797 229943818 -23312765 + (TTG)n Simple_repeat Simple_repeat 1 21 0 800 209 0 0 chr2 229943818 229943952 -23312631 - FRAM SINE Alu -31 145 12 2706 198 15 50 chr2 229943952 229944597 -23311986 - L1M LINE L1 -1187 4959 4371 1633 176 31 68 chr2 229944581 229944882 -23311701 - L1 LINE L1 -2222 3924 3614 * 2401 100 0 0 chr2 229944882 229945181 -23311402 + AluSg SINE Alu 1 299 -11 1633 176 31 68 chr2 229945181 229945245 -23311338 - L1 LINE L1 -2532 3614 3574 1729 160 3 38 chr2 229945245 229945561 -23311022 - AluJb SINE Alu 0 306 1 1633 176 31 68 chr2 229945561 229945637 -23310946 - L1 LINE L1 -2572 3574 3497 503 250 47 0 chr2 229945641 229945789 -23310794 - L1ME LINE L1 -297 5824 5670 2370 76 10 0 chr2 229945800 229946091 -23310492 - AluSp SINE Alu -19 294 1 184 200 55 36 chr2 229946238 229946293 -23310290 + L2 LINE L2 3257 3312 -1 2437 78 10 0 chr2 229946338 229946646 -23309937 + AluY SINE Alu 1 311 0 312 273 50 156 chr2 229946669 229946908 -23309675 - L3 LINE CR1 -3 1574 1390 2223 124 0 6 chr2 229946908 229947222 -23309361 + AluSx SINE Alu 1 312 0 312 273 50 156 chr2 229947222 229947366 -23309217 - L3 LINE CR1 -187 1390 1232 235 322 89 17 chr2 229947423 229947603 -23308980 + L2 LINE L2 2768 2960 -354 1695 168 20 30 chr2 229949270 229949568 -23307015 + AluJo SINE Alu 7 301 -11 257 281 88 9 chr2 229949596 229949710 -23306873 + MIR SINE MIR 22 144 -64 2353 106 3 3 chr2 229949769 229950080 -23306503 - AluSq SINE Alu 0 313 3 637 223 165 16 chr2 229950744 229950932 -23305651 + MIR SINE MIR 46 261 -1 288 329 21 28 chr2 229950931 229951074 -23305509 - MIR SINE MIR -101 161 20 * 629 209 72 51 chr2 229951098 229951333 -23305250 - MIR SINE MIR 0 262 23 180 254 30 0 chr2 229952970 229953037 -23303546 + L2 LINE L2 2908 2976 -296 2086 113 28 3 chr2 229953045 229953336 -23303247 - AluSx SINE Alu -14 298 1 852 234 56 4 chr2 229953462 229953693 -23302890 + MIR SINE MIR 10 252 -10 205 349 77 57 chr2 229953962 229954171 -23302412 + MIR SINE MIR 34 246 -16 195 247 43 54 chr2 229954748 229954841 -23301742 - L2 LINE L2 -1 3271 3180 824 177 75 105 chr2 229955650 229955737 -23300846 - MER33 DNA MER1_type -2261 324 236 2314 108 0 3 chr2 229955737 229956042 -23300541 + AluSx SINE Alu 1 304 -8 824 177 75 105 chr2 229956042 229956288 -23300295 - MER33 DNA MER1_type -2349 236 1 525 253 71 40 chr2 229956957 229957182 -23299401 - L2 LINE L2 -1 3312 3081 231 167 0 24 chr2 229957261 229957303 -23299280 + Alu SINE Alu 172 212 -90 241 268 0 47 chr2 229957409 229957536 -23299047 + G-rich Low_complexity Low_complexity 2 122 0 2079 104 0 4 chr2 229959723 229960001 -23296582 + AluSq SINE Alu 27 303 -10 205 254 0 32 chr2 229960681 229960744 -23295839 + CT-rich Low_complexity Low_complexity 5 65 0 193 337 11 45 chr2 229960795 229960884 -23295699 + MIR SINE MIR 46 131 -77 237 132 0 0 chr2 229961064 229961102 -23295481 + (A)n Simple_repeat Simple_repeat 1 38 0 829 252 183 21 chr2 229961838 229962128 -23294455 - MLT1J LTR MaLR -174 337 1 430 255 54 0 chr2 229962810 229962959 -23293624 + MER117 DNA MER1_type 41 197 0 654 249 132 5 chr2 229963345 229963550 -23293033 + MIR SINE MIR 8 238 -24 180 0 0 0 chr2 229963702 229963722 -23292861 + (TG)n Simple_repeat Simple_repeat 2 21 0 323 196 0 113 chr2 229963737 229963798 -23292785 - L1MC4 LINE L1 -1339 6703 6637 6280 136 50 30 chr2 229963798 229964043 -23292540 - Tigger3b DNA MER2_type -1799 1229 990 2065 116 12 38 chr2 229964043 229964362 -23292221 + AluSx SINE Alu 1 311 -1 6280 136 50 30 chr2 229964362 229964614 -23291969 - Tigger3b DNA MER2_type -2038 990 744 2417 65 11 0 chr2 229964614 229964924 -23291659 - AluSg SINE Alu 0 313 1 6280 136 50 30 chr2 229964924 229965348 -23291235 - Tigger3b DNA MER2_type -2284 744 274 2334 108 3 0 chr2 229965348 229965654 -23290929 + AluSq SINE Alu 1 307 -6 6280 136 50 30 chr2 229965654 229965934 -23290649 - Tigger3b DNA MER2_type -2754 274 1 323 196 0 113 chr2 229965934 229965969 -23290614 - L1MC4 LINE L1 -1405 6637 6618 210 136 0 23 chr2 229966013 229966057 -23290526 - MIR SINE MIR -150 58 16 345 257 132 33 chr2 229966105 229966388 -23290195 - L2 LINE L2 -263 3050 2736 380 206 323 0 chr2 229966406 229966561 -23290022 - L1ME4a LINE L1 -16 6105 5901 2004 145 7 16 chr2 229966613 229966923 -23289660 - AluJo SINE Alu -5 307 1 299 377 7 0 chr2 229966960 229967114 -23289469 - L1MC4 LINE L1 -293 7749 7595 316 226 69 0 chr2 229967153 229967255 -23289328 - L1MC5 LINE L1 -542 7419 7311 2336 115 0 13 chr2 229967259 229967573 -23289010 - AluSx SINE Alu -2 310 1 255 270 154 91 chr2 229967799 229968049 -23288534 - L1MC5 LINE L1 -746 7215 6982 2137 142 0 0 chr2 229968049 229968359 -23288224 - AluSx SINE Alu -2 310 1 255 270 154 91 chr2 229968359 229968710 -23287873 - L1MC5 LINE L1 -979 6982 6589 2084 142 23 0 chr2 229968710 229969013 -23287570 + AluSx SINE Alu 1 310 -2 255 270 154 91 chr2 229969013 229969201 -23287382 - L1MC5 LINE L1 -1372 6589 6414 222 318 40 48 chr2 229969260 229969386 -23287197 - L2 LINE L2 -572 2742 2618 605 203 53 0 chr2 229969864 229969997 -23286586 + FLAM_C SINE Alu 2 141 -2 1981 128 7 24 chr2 229970900 229971197 -23285386 + AluSx SINE Alu 1 292 -20 2391 95 10 0 chr2 229971197 229971502 -23285081 + AluSp SINE Alu 1 308 -5 566 299 100 79 chr2 229971612 229971898 -23284685 + L1ME4a LINE L1 5629 5930 -191 2288 82 7 10 chr2 229971898 229972191 -23284392 + AluSx SINE Alu 1 292 -20 566 299 100 79 chr2 229972191 229972375 -23284208 + L1ME4a LINE L1 5930 6109 -12 239 264 101 39 chr2 229972396 229972574 -23284009 - L1ME4a LINE L1 -1987 5821 5633 * 333 260 39 55 chr2 229972563 229972690 -23283893 + L1ME1 LINE L1 5925 6049 -117 326 173 0 0 chr2 229972694 229972746 -23283837 - Tigger2a DNA MER2_type -363 71 20 2357 95 0 0 chr2 229972784 229973078 -23283505 + AluSg SINE Alu 1 294 -16 1614 160 87 25 chr2 229973078 229973285 -23283298 + Tigger2a DNA MER2_type 9 249 -2469 1678 180 7 0 chr2 229973285 229973563 -23283020 - AluJb SINE Alu -16 296 17 1614 160 87 25 chr2 229973563 229973711 -23282872 + Tigger2a DNA MER2_type 249 386 -58 2259 123 3 0 chr2 229973711 229974012 -23282571 + AluSp SINE Alu 1 302 -11 1410 123 41 0 chr2 229974014 229974234 -23282349 - MER30 DNA MER1_type -1 229 1 634 271 143 0 chr2 229974235 229974479 -23282104 - L2 LINE L2 -2094 1220 942 2267 112 0 3 chr2 229974481 229974775 -23281808 + AluSx SINE Alu 1 293 -19 1199 124 0 6 chr2 229974776 229974945 -23281638 + AluSg/x SINE Alu 134 301 -11 413 296 170 0 chr2 229975457 229975592 -23280991 - MER5A DNA MER1_type -23 166 9 1636 189 40 11 chr2 229975617 229975967 -23280616 - MER63 DNA MER1_type -1 1060 701 1235 194 214 6 chr2 229975976 229976336 -23280247 - LTR47A LTR ERVL -15 437 3 246 270 31 68 chr2 229976336 229976433 -23280150 - L1ME4a LINE L1 -2282 5526 5436 1889 120 88 7 chr2 229976433 229976717 -23279866 - AluSg SINE Alu -3 307 1 246 270 31 68 chr2 229976717 229976782 -23279801 - L1ME4a LINE L1 -2372 5436 5370 312 224 11 11 chr2 229977099 229977209 -23279374 - AluJ/monomer SINE Alu -257 46 2 2445 82 0 10 chr2 229977439 229977743 -23278840 - AluSx SINE Alu -11 301 1 214 197 28 70 chr2 229978151 229978222 -23278361 + MIR SINE MIR 54 122 -86 471 321 71 36 chr2 229978300 229978524 -23278059 + MIR SINE MIR 28 259 -3 245 309 25 25 chr2 229978756 229978918 -23277665 + G-rich Low_complexity Low_complexity 6 167 0 * 354 247 16 54 chr2 229978806 229978992 -23277591 + (CGGGG)n Simple_repeat Simple_repeat 1 179 0 1339 195 61 4 chr2 230029078 230029339 -23227244 - MSTB LTR MaLR -150 276 1 3726 200 6 29 chr2 230029339 230030173 -23226410 + L1MC/D LINE L1 4460 5274 -929 2200 108 0 0 chr2 230030173 230030470 -23226113 + AluSg SINE Alu 1 297 -13 3726 200 6 29 chr2 230030470 230030648 -23225935 + L1MC/D LINE L1 5274 5455 -748 297 289 107 19 chr2 230030833 230030992 -23225591 + MIR SINE MIR 28 200 -62 325 274 218 20 chr2 230032156 230032353 -23224230 + MIR SINE MIR 8 243 -19 316 292 174 19 chr2 230032503 230032664 -23223919 + MIR SINE MIR 73 258 -4 2182 120 0 0 chr2 230032720 230033029 -23223554 - AluSx SINE Alu -3 309 1 671 266 67 9 chr2 230033240 230033377 -23223206 + L1MD2 LINE L1 6020 6148 -1847 2185 91 0 13 chr2 230033377 230033675 -23222908 - AluSg SINE Alu -16 294 1 671 266 67 9 chr2 230033675 230033700 -23222883 + L1MD2 LINE L1 6148 6170 -1825 1588 113 33 139 chr2 230033700 230034037 -23222546 - AluSx SINE Alu 0 302 2 671 266 67 9 chr2 230034037 230034162 -23222421 + L1MD2 LINE L1 6170 7970 -25 303 266 121 80 chr2 230036552 230036677 -23219906 + MIR SINE MIR 24 161 -101 2388 95 0 0 chr2 230036677 230036982 -23219601 - AluSx SINE Alu -7 305 1 303 266 121 80 chr2 230036982 230037055 -23219528 + MIR SINE MIR 161 230 -32 1790 164 62 55 chr2 230037115 230037157 -23219426 - MER67A LTR ERV1 0 543 503 2267 102 0 3 chr2 230037157 230037460 -23219123 - AluSg SINE Alu -8 302 1 1790 164 62 55 chr2 230037460 230037897 -23218686 - MER67A LTR ERV1 -40 503 31 420 200 0 0 chr2 230037953 230038033 -23218550 - MER67A LTR ERV1 -457 86 7 1293 232 25 43 chr2 230038033 230038430 -23218153 - MER67A-int LTR ERV1 -26 4910 4521 2283 108 0 0 chr2 230038463 230038770 -23217813 - AluSq SINE Alu -6 307 1 1186 199 63 31 chr2 230038770 230039147 -23217436 - MER67A LTR ERV1 -126 417 3 510 156 0 0 chr2 230039147 230039229 -23217354 - MER67A LTR ERV1 -460 83 2 1900 147 3 25 chr2 230041015 230041334 -23215249 + AluJo SINE Alu 1 312 0 433 165 10 10 chr2 230041951 230042054 -23214529 + GA-rich Low_complexity Low_complexity 3 105 0 2385 67 10 0 chr2 230044038 230044337 -23212246 - AluY SINE Alu -9 302 1 303 313 68 34 chr2 230044346 230044493 -23212090 + MIR SINE MIR 108 259 -3 534 272 37 0 chr2 230044719 230044855 -23211728 - MIR SINE MIR -94 168 28 306 352 89 19 chr2 230045754 230045967 -23210616 + MIR SINE MIR 2 229 -33 353 339 148 25 chr2 230046034 230046569 -23210014 - L2 LINE L2 -50 3222 2622 275 420 0 0 chr2 230046853 230047029 -23209554 + G-rich Low_complexity Low_complexity 1 176 0 237 269 0 43 chr2 230047144 230047237 -23209346 + (GGGTG)n Simple_repeat Simple_repeat 4 92 0 411 285 110 2 chr2 230049249 230049412 -23207171 - MIR SINE MIR -68 140 17 504 274 112 64 chr2 230050510 230050886 -23205697 + MLT1K LTR MaLR 191 584 -4 26 30 0 0 chr2 230051245 230051278 -23205305 + AT_rich Low_complexity Low_complexity 1 33 0 2204 89 14 0 chr2 230051473 230051766 -23204817 + AluY SINE Alu 1 297 -14 2314 91 0 7 chr2 230053298 230053606 -23202977 + AluSx SINE Alu 1 306 -6 2142 108 17 0 chr2 230053673 230053970 -23202613 + AluSx SINE Alu 1 302 -10 308 307 47 47 chr2 230054170 230054297 -23202286 - L2 LINE L2 -8 3264 3138 303 290 185 29 chr2 230054379 230054569 -23202014 - MIR SINE MIR -43 219 3 2165 112 3 0 chr2 230054614 230054908 -23201675 - AluSx SINE Alu -17 295 1 276 281 193 64 chr2 230055015 230055310 -23201273 + L2 LINE L2 2921 3253 -60 215 257 14 27 chr2 230055952 230056026 -23200557 - MIR SINE MIR 0 262 190 875 256 104 0 chr2 230056493 230056723 -23199860 - MIR SINE MIR -5 257 4 2199 118 10 0 chr2 230056850 230057155 -23199428 + AluSx SINE Alu 1 308 -4 485 287 33 22 chr2 230057208 230057389 -23199194 + MIR SINE MIR 34 216 -46 411 302 134 11 chr2 230057814 230057993 -23198590 - LTR67 LTR ERVL -352 205 5 1478 180 136 71 chr2 230059136 230059411 -23197172 - MLT1C LTR MaLR -5 462 147 2200 84 28 0 chr2 230059411 230059697 -23196886 - AluSx SINE Alu -18 294 1 1478 180 136 71 chr2 230059697 230059855 -23196728 - MLT1C LTR MaLR -320 147 1 213 266 64 21 chr2 230060054 230060148 -23196435 + MIR SINE MIR 70 167 -95 328 355 46 0 chr2 230060504 230060656 -23195927 - MIR3 SINE MIR -5 203 45 33 25 0 0 chr2 230060908 230060948 -23195635 + GC_rich Low_complexity Low_complexity 1 40 0 189 0 0 0 chr2 230060982 230061003 -23195580 + (CGG)n Simple_repeat Simple_repeat 1 21 0 21 0 0 0 chr2 230061491 230061512 -23195071 + GC_rich Low_complexity Low_complexity 1 21 0 201 121 0 0 chr2 230062770 230062803 -23193780 + (GGA)n Simple_repeat Simple_repeat 1 33 0 212 267 0 86 chr2 230063312 230063428 -23193155 + GA-rich Low_complexity Low_complexity 4 109 0 300 288 231 12 chr2 230063913 230064073 -23192510 - L3 LINE CR1 -113 1464 1270 250 370 0 0 chr2 230065203 230065284 -23191299 + MIR3 SINE MIR 86 166 -42 359 234 180 9 chr2 230066507 230066618 -23189965 - L3 LINE CR1 -86 1491 1362 380 253 84 84 chr2 230067636 230067790 -23188793 - MER91B DNA MER1_type -35 155 2 549 100 57 7 chr2 230070635 230070775 -23185808 + (TG)n Simple_repeat Simple_repeat 1 147 0 225 82 94 12 chr2 230070792 230070877 -23185706 + (TG)n Simple_repeat Simple_repeat 1 92 0 2364 45 3 3 chr2 230073364 230073653 -23182930 - AluY SINE Alu -10 301 13 495 254 26 106 chr2 230074445 230074634 -23181949 + MIR SINE MIR 48 221 -41 247 368 153 0 chr2 230074654 230074798 -23181785 + MER91A DNA MER1_type 1 166 -30 2187 158 45 14 chr2 230076326 230076768 -23179815 - LTR32 LTR ERVL -3 468 13 227 290 124 35 chr2 230079476 230079621 -23176962 + L2 LINE L2 3080 3237 -35 21 36 0 0 chr2 230079975 230080003 -23176580 + AT_rich Low_complexity Low_complexity 1 28 0 905 76 8 0 chr2 230080003 230080122 -23176461 - L1PB1 LINE L1 -2 6149 6030 255 207 17 0 chr2 230080244 230080302 -23176281 - MER113 DNA MER1_type? 0 521 463 2498 102 85 73 chr2 230080490 230080865 -23175718 + MSTA LTR MaLR 1 383 -45 2328 112 0 0 chr2 230080865 230081177 -23175406 - AluSx SINE Alu 0 312 1 2498 102 85 73 chr2 230081177 230081224 -23175359 + MSTA LTR MaLR 383 428 0 322 360 0 0 chr2 230081293 230081379 -23175204 - MER5B DNA MER1_type 0 178 93 821 137 38 0 chr2 230081403 230081534 -23175049 - AluJo SINE Alu -176 136 1 201 191 85 0 chr2 230081577 230081624 -23174959 - MER5B DNA MER1_type -127 51 1 1240 155 70 5 chr2 230081825 230082038 -23174545 + L1PA8 LINE L1 5946 6172 0 336 295 62 18 chr2 230082134 230082246 -23174337 + MIR3 SINE MIR 2 118 -90 353 283 83 0 chr2 230084117 230084237 -23172346 - LTR67 LTR ERVL 0 557 428 258 280 56 70 chr2 230084357 230084500 -23172083 - LTR67 LTR ERVL -320 237 97 407 193 101 9 chr2 230084542 230084651 -23171932 - MER63B DNA MER1_type -1 434 316 2004 240 36 23 chr2 230084673 230085137 -23171446 + L1MC4 LINE L1 101 574 -5966 3402 116 47 4 chr2 230085137 230085627 -23170956 + MER9 LTR ERVK 1 511 0 2004 240 36 23 chr2 230085627 230085691 -23170892 + L1MC4 LINE L1 574 636 -5904 * 6756 221 27 47 chr2 230085690 230086585 -23169998 + L1MC4 LINE L1 2774 3686 -2854 1720 97 0 0 chr2 230086585 230086813 -23169770 + AluSx SINE Alu 1 228 -84 259 51 0 0 chr2 230086813 230086852 -23169731 + AluSx SINE Alu 262 300 0 6756 221 27 47 chr2 230086852 230087011 -23169572 + L1MC4 LINE L1 3685 3846 -2694 863 186 0 64 chr2 230087011 230087183 -23169400 + FRAM SINE Alu 1 161 -5 6756 221 27 47 chr2 230087183 230088007 -23168576 + L1MC4 LINE L1 3846 4652 -1888 1795 172 48 9 chr2 230088110 230088695 -23167888 + L1MC4 LINE L1 5864 6450 -108 1694 175 20 29 chr2 230088713 230089055 -23167528 - MER63B DNA MER1_type -90 346 8 285 277 114 59 chr2 230089663 230089952 -23166631 + MLT1K LTR MaLR 284 588 0 195 194 0 0 chr2 230091006 230091042 -23165541 + L2 LINE L2 3263 3298 -15 1299 270 38 8 chr2 230091050 230091442 -23165141 + L2 LINE L2 2498 2901 -413 255 164 36 36 chr2 230091500 230091555 -23165028 + AluSg/x SINE Alu 115 169 -133 1787 95 70 60 chr2 230091556 230091871 -23164712 - THE1C LTR MaLR -56 319 2 511 162 0 0 chr2 230091871 230091945 -23164638 + AluJo SINE Alu 101 174 -138 225 97 0 0 chr2 230091945 230091976 -23164607 + MSTB LTR MaLR 345 375 -51 514 165 13 0 chr2 230091984 230092063 -23164520 + AluJo SINE Alu 176 255 -57 546 57 0 0 chr2 230092071 230092141 -23164442 + (GAAA)n Simple_repeat Simple_repeat 2 71 0 684 187 49 0 chr2 230092142 230092265 -23164318 - MER3 DNA MER1_type -80 129 1 926 266 8 76 chr2 230092281 230092649 -23163934 + L2 LINE L2 2955 3297 -16 287 185 37 0 chr2 230092671 230092725 -23163858 - L2 LINE L2 -10 3262 3207 591 258 153 24 chr2 230092725 230092973 -23163610 - LTR4 LTR ERV1 0 596 317 706 236 72 89 chr2 230093060 230093421 -23163162 - LTR4 LTR ERV1 -239 357 3 279 229 154 55 chr2 230093443 230093585 -23162998 - L2 LINE L2 -63 3250 3081 387 0 0 0 chr2 230093585 230093628 -23162955 + (TG)n Simple_repeat Simple_repeat 1 43 0 279 229 154 55 chr2 230093628 230093686 -23162897 - L2 LINE L2 -232 3081 3030 448 197 257 13 chr2 230093841 230093993 -23162590 + MER5A DNA MER1_type 1 189 0 194 273 0 0 chr2 230094012 230094056 -23162527 + L2 LINE L2 3270 3313 0 2285 114 18 15 chr2 230094573 230094907 -23161676 - MER1B DNA MER1_type -2 335 1 820 249 46 5 chr2 230094971 230095168 -23161415 - MIR SINE MIR -21 241 37 2764 82 3 0 chr2 230095386 230095740 -23160843 - THE1A LTR MaLR 0 355 1 385 206 55 0 chr2 230095800 230095873 -23160710 - MER69 DNA AcHobo 0 2526 2450 341 205 60 0 chr2 230095870 230095953 -23160630 - MER69 DNA AcHobo -2379 147 60 * 2008 121 34 0 chr2 230096094 230096391 -23160192 + AluSx SINE Alu 1 307 -5 2274 84 3 0 chr2 230097135 230097433 -23159150 - AluSg SINE Alu -11 299 1 1610 147 33 50 chr2 230098052 230098351 -23158232 + AluJb SINE Alu 1 294 -18 1943 107 3 20 chr2 230098668 230098967 -23157616 - AluSx SINE Alu -18 294 1 674 243 14 0 chr2 230098978 230099126 -23157457 + MIR SINE MIR 32 181 -81 1021 190 156 42 chr2 230099174 230099532 -23157051 - MER113 DNA MER1_type? -119 402 4 2230 88 0 0 chr2 230099576 230099873 -23156710 - AluY SINE Alu -13 298 2 646 220 76 11 chr2 230102588 230102852 -23153731 - MLT1A1 LTR MaLR -2 363 3 197 225 28 70 chr2 230102871 230102942 -23153641 - MIR3 SINE MIR -34 174 107 348 138 0 0 chr2 230103335 230103393 -23153190 + L1PB3 LINE L1 6094 6151 -3 1976 123 55 33 chr2 230103503 230103870 -23152713 + THE1C LTR MaLR 1 375 0 1600 165 34 17 chr2 230104431 230104722 -23151861 + AluJb SINE Alu 2 297 -15 2097 103 3 0 chr2 230104818 230105110 -23151473 - AluSq SINE Alu -20 293 1 236 293 36 14 chr2 230105112 230105252 -23151331 - L1 LINE L1 -1747 4399 4257 614 230 110 21 chr2 230106040 230106231 -23150352 - MIR SINE MIR -46 216 9 272 254 119 45 chr2 230106254 230106388 -23150195 - MLT1K LTR MaLR -287 301 158 291 399 0 0 chr2 230106468 230106611 -23149972 + L2 LINE L2 2842 2984 -329 853 235 285 68 chr2 230107361 230107817 -23148766 + MLT1G LTR MaLR 1 555 0 2116 96 0 7 chr2 230108510 230108803 -23147780 - AluSg1 SINE Alu -18 291 1 1338 183 27 39 chr2 230108816 230109149 -23147434 - Charlie4a DNA MER1_type -96 412 84 346 141 40 188 chr2 230109147 230109220 -23147363 + MER97b DNA MER1_type? 46 128 -925 * 1891 163 3 0 chr2 230109220 230109520 -23147063 - AluJb SINE Alu -11 301 1 346 141 40 188 chr2 230109520 230109570 -23147013 + MER97b DNA MER1_type? 128 146 -907 1722 109 106 0 chr2 230109570 230109853 -23146730 + AluSp SINE Alu 1 313 0 346 141 40 188 chr2 230109853 230109877 -23146706 + MER97b DNA MER1_type? 146 172 -881 383 156 11 111 chr2 230109936 230110026 -23146557 - Charlie4a DNA MER1_type -427 81 1 648 301 22 26 chr2 230110054 230110283 -23146300 + MIR SINE MIR 28 255 -7 261 263 0 0 chr2 230110869 230110926 -23145657 + L2 LINE L2 3215 3271 -1 196 301 27 0 chr2 230111087 230111160 -23145423 - MIR SINE MIR -179 83 9 2305 146 22 0 chr2 230111165 230111522 -23145061 - MLT1A1 LTR MaLR 0 365 1 203 292 177 10 chr2 230111561 230111657 -23144926 - MER5B DNA MER1_type -66 112 1 776 245 80 5 chr2 230111702 230111890 -23144693 + MIR SINE MIR 49 250 -12 378 0 0 0 chr2 230111899 230111941 -23144642 + (TTA)n Simple_repeat Simple_repeat 2 43 0 417 247 87 57 chr2 230113031 230113239 -23143344 + MLT1L LTR MaLR 108 391 -202 2325 185 12 124 chr2 230113243 230113886 -23142697 - MER70B LTR ERVL -1 577 7 302 363 112 16 chr2 230114273 230114524 -23142059 - MLT1K LTR MaLR -25 563 289 2204 122 19 53 chr2 230115011 230115388 -23141195 + THE1B LTR MaLR 1 364 0 1671 194 48 9 chr2 230116724 230117054 -23139529 + MER61A LTR ERV1 1 343 0 2187 95 0 43 chr2 230117285 230117611 -23138972 - AluSx SINE Alu 0 312 1 401 90 15 0 chr2 230117680 230117747 -23138836 + (TC)n Simple_repeat Simple_repeat 1 68 0 1973 81 92 0 chr2 230118281 230118552 -23138031 - AluSg SINE Alu -14 296 1 4013 124 9 50 chr2 230118746 230119279 -23137304 - MER41B LTR ERV1 0 635 133 2388 63 0 10 chr2 230119279 230119581 -23137002 - AluY SINE Alu -11 300 2 4013 124 9 50 chr2 230119581 230119707 -23136876 - MER41B LTR ERV1 -502 133 3 606 201 41 73 chr2 230119795 230119830 -23136753 + MIR SINE MIR 16 51 -157 2176 136 24 24 chr2 230119830 230120205 -23136378 + THE1C LTR MaLR 1 375 0 606 201 41 73 chr2 230120205 230120360 -23136223 + MIR SINE MIR 51 200 -8 232 152 0 22 chr2 230122159 230122205 -23134378 - MER58B DNA MER1_type -2 339 295 1893 111 25 0 chr2 230122224 230122503 -23134080 - AluSx SINE Alu -22 290 5 1098 208 158 4 chr2 230122508 230122773 -23133810 - MER58B DNA MER1_type -32 309 4 184 260 96 62 chr2 230123123 230123269 -23133314 - L3 LINE CR1 -351 1226 1076 253 284 29 10 chr2 230123986 230124088 -23132495 + L1MD3 LINE L1 7880 7983 -12 544 314 113 29 chr2 230124314 230124476 -23132107 - L2 LINE L2 -71 3201 3054 2330 88 15 103 chr2 230124476 230124528 -23132055 - THE1B LTR MaLR 0 364 309 2244 79 3 0 chr2 230124528 230124820 -23131763 - AluSp SINE Alu -7 306 14 2330 88 15 103 chr2 230124820 230125166 -23131417 - THE1B LTR MaLR -55 309 1 544 314 113 29 chr2 230125166 230125654 -23130929 - L2 LINE L2 -218 3054 2494 683 249 193 56 chr2 230126840 230127289 -23129294 - MLT1H LTR MaLR 0 549 1 354 264 208 7 chr2 230127405 230127549 -23129034 - MIR SINE MIR -73 189 17 4623 187 18 9 chr2 230128416 230129325 -23127258 - MER63C DNA MER1_type -2 928 12 23 0 0 0 chr2 230131752 230131775 -23124808 + AT_rich Low_complexity Low_complexity 1 23 0 222 304 116 36 chr2 230131811 230131923 -23124660 + MIR SINE MIR 16 136 -72 2092 65 61 4 chr2 230132251 230132528 -23124055 + AluY SINE Alu 1 293 -18 2686 113 11 28 chr2 230132528 230132961 -23123622 - L1PA16 LINE L1 -17 6149 5724 626 266 78 44 chr2 230134692 230135011 -23121572 - LTR16B LTR ERVL 0 464 135 180 125 89 54 chr2 230135091 230135147 -23121436 - MIR SINE MIR -96 112 55 209 81 0 27 chr2 230135220 230135257 -23121326 + (CCCTAA)n Simple_repeat Simple_repeat 6 41 0 299 295 13 70 chr2 230135884 230136040 -23120543 + L2 LINE L2 2611 2757 -557 221 344 0 0 chr2 230136751 230136815 -23119768 - MER5A DNA MER1_type -41 148 85 1835 140 58 3 chr2 230137815 230138108 -23118475 - AluJb SINE Alu -2 310 2 190 302 147 17 chr2 230138713 230138829 -23117754 + L3b LINE CR1 1358 1488 -95 219 282 75 98 chr2 230140267 230140345 -23116238 - MIR SINE MIR -1 261 183 1685 176 17 23 chr2 230140345 230140647 -23115936 - AluJo SINE Alu -12 300 1 219 282 75 98 chr2 230140647 230140742 -23115841 - MIR SINE MIR -79 183 92 2405 62 0 10 chr2 230141613 230141922 -23114661 - AluY SINE Alu 0 306 1 184 327 56 56 chr2 230142394 230142501 -23114082 - L2 LINE L2 -25 3247 3141 3175 184 36 36 chr2 230143034 230143526 -23113057 + L1MD2 LINE L1 5675 6169 -190 2058 88 67 11 chr2 230143526 230143811 -23112772 + AluSg SINE Alu 1 301 -9 3175 184 36 36 chr2 230143811 230144003 -23112580 + L1MD2 LINE L1 6168 6359 0 1334 209 133 30 chr2 230144562 230144969 -23111614 - MLT1J LTR MaLR -62 449 1 859 206 50 23 chr2 230145126 230145345 -23111238 - MIR SINE MIR -26 236 12 2071 152 31 28 chr2 230145352 230145575 -23111008 + MLT1A1 LTR MaLR 10 236 -129 2414 152 31 12 chr2 230145575 230145995 -23110588 + MSTA LTR MaLR 1 428 0 2071 152 31 28 chr2 230145995 230146126 -23110457 + MLT1A1 LTR MaLR 236 365 0 217 354 15 0 chr2 230147593 230147658 -23108925 - L2 LINE L2 -86 3186 3121 6293 217 72 81 chr2 230148099 230148457 -23108126 + L1MC4a LINE L1 5452 5812 -1996 1542 204 0 14 chr2 230148457 230148771 -23107812 + AluJb SINE Alu 11 320 0 6293 217 72 81 chr2 230148771 230149328 -23107255 + L1MC4a LINE L1 5812 6373 -1435 2159 117 7 3 chr2 230149328 230149637 -23106946 - AluSx SINE Alu -2 310 1 6293 217 72 81 chr2 230149637 230149669 -23106914 + L1MC4a LINE L1 6373 6404 -1404 2731 152 9 13 chr2 230149669 230150116 -23106467 + MER65A LTR ERV1 1 445 0 6293 217 72 81 chr2 230150116 230151448 -23105135 + L1MC4a LINE L1 6404 7713 -95 2281 83 0 10 chr2 230151478 230151768 -23104815 - AluSc SINE Alu -22 287 1 1336 180 11 38 chr2 230151779 230152011 -23104572 - Tigger2 DNA MER2_type -4 2714 2488 2641 48 0 3 chr2 230152011 230152321 -23104262 + AluY SINE Alu 1 309 -2 1336 180 11 38 chr2 230152321 230152349 -23104234 - Tigger2 DNA MER2_type -230 2488 2461 4518 124 25 43 chr2 230152413 230153172 -23103411 - Tigger2 DNA MER2_type -1972 746 2 249 108 0 0 chr2 230153180 230153217 -23103366 + (GA)n Simple_repeat Simple_repeat 2 38 0 238 159 36 159 chr2 230153220 230153280 -23103303 + L1MC4 LINE L1 7922 7957 -85 2292 99 6 19 chr2 230153280 230153593 -23102990 - AluSx SINE Alu -3 309 1 238 159 36 159 chr2 230153593 230153670 -23102913 + L1MC4 LINE L1 7957 8042 0 454 254 9 0 chr2 230154766 230154880 -23101703 + MER117 DNA MER1_type 47 161 -36 2356 73 3 7 chr2 230155231 230155532 -23101051 + AluY SINE Alu 1 300 -11 205 254 56 24 chr2 230157250 230157376 -23099207 + L2 LINE L2 3098 3227 -86 4237 145 3 0 chr2 230157666 230158299 -23098284 - MER41B LTR ERV1 0 635 1 269 241 0 0 chr2 230159048 230159102 -23097481 + L1ME LINE L1 5630 5683 -438 236 306 174 0 chr2 230159724 230159868 -23096715 + MER5B DNA MER1_type 2 170 -8 313 261 43 17 chr2 230160007 230160122 -23096461 - MER103 DNA DNA -46 120 3 286 336 0 25 chr2 230160390 230160512 -23096071 - MIR SINE MIR -70 138 20 2405 210 13 64 chr2 230161396 230161923 -23094660 - L1ME1 LINE L1 -4 6162 5669 2503 79 0 3 chr2 230161923 230162228 -23094355 - AluY SINE Alu -7 304 1 2405 210 13 64 chr2 230162228 230162309 -23094274 - L1ME1 LINE L1 -497 5669 5585 271 162 15 15 chr2 230162472 230162540 -23094043 - L1MC/D LINE L1 -2025 5783 5716 998 128 0 0 chr2 230162614 230162747 -23093836 - AluSq/x SINE Alu -180 133 1 2149 233 83 10 chr2 230162760 230163276 -23093307 - MLT1E LTR MaLR -39 554 1 496 346 14 4 chr2 230163344 230163704 -23092879 - L1MEc LINE L1 -3756 2492 2134 536 279 66 64 chr2 230163983 230164527 -23092056 - HAL1 LINE L1 -851 1656 1112 218 245 32 21 chr2 230164562 230164656 -23091927 + T-rich Low_complexity Low_complexity 2 96 0 706 214 65 18 chr2 230165026 230165194 -23091389 + MER5B DNA MER1_type 1 176 -2 348 281 173 0 chr2 230165621 230165760 -23090823 + MER5A DNA MER1_type 26 188 -1 301 300 61 28 chr2 230166007 230166187 -23090396 + L2 LINE L2 3127 3312 -1 326 211 56 0 chr2 230169193 230169264 -23087319 - MER63 DNA MER1_type -9 1052 978 518 145 0 0 chr2 230169264 230169340 -23087243 - MER63 DNA MER1_type -310 750 675 2041 138 7 3 chr2 230169787 230170084 -23086499 + AluSx SINE Alu 1 298 -14 1071 123 31 19 chr2 230170209 230170371 -23086212 + AluSg/x SINE Alu 132 295 -15 347 203 70 133 chr2 230170509 230170652 -23085931 - MLT1B LTR MaLR -256 134 1 319 369 53 0 chr2 230170662 230170849 -23085734 - L3b LINE CR1 -114 1469 1273 257 280 11 11 chr2 230171819 230171912 -23084671 - MIR3 SINE MIR 0 208 116 533 232 79 28 chr2 230172178 230172355 -23084228 - MIR3 SINE MIR -13 195 10 273 275 115 44 chr2 230173218 230173400 -23083183 + MER117 DNA MER1_type 1 195 -2 2277 116 7 0 chr2 230173901 230174204 -23082379 - AluSg SINE Alu -5 305 1 226 248 52 112 chr2 230174536 230174698 -23081885 + MIR SINE MIR 18 166 -78 3798 253 114 19 chr2 230176827 230178371 -23078212 - L2 LINE L2 -548 2766 1076 279 274 29 39 chr2 230178571 230178673 -23077910 - L2 LINE L2 -8 3305 3205 364 277 18 9 chr2 230178881 230178993 -23077590 - L3 LINE CR1 -543 1034 922 1611 183 84 12 chr2 230179051 230179373 -23077210 + MER2 DNA MER2_type 1 345 0 510 155 0 0 chr2 230179411 230179508 -23077075 + CT-rich Low_complexity Low_complexity 2 98 0 2107 129 27 0 chr2 230179508 230179803 -23076780 - AluSx SINE Alu -9 303 1 896 133 0 22 chr2 230179804 230179939 -23076644 - AluJo SINE Alu -172 140 9 1047 183 32 32 chr2 230180939 230181158 -23075425 + MER20 DNA MER1_type 1 219 0 372 248 19 19 chr2 230181307 230181412 -23075171 + MIR SINE MIR 21 125 -137 619 254 121 54 chr2 230181611 230181942 -23074641 - L1ME4a LINE L1 -30 6091 5739 199 27 27 54 chr2 230182039 230182076 -23074507 + (TTTTTA)n Simple_repeat Simple_repeat 5 40 0 9957 63 9 92 chr2 230182078 230183563 -23073020 - SVA Other Other -5 1381 19 2502 143 10 0 chr2 230183592 230183997 -23072586 - L1MA3 LINE L1 -9 6296 5888 610 313 79 0 chr2 230184168 230184382 -23072201 + MIR SINE MIR 1 231 -31 461 118 7 0 chr2 230184577 230184645 -23071938 + L1MC/D LINE L1 5673 5743 -499 426 232 65 12 chr2 230184650 230184818 -23071765 - MER69 DNA AcHobo -5 2521 2345 1974 176 131 7 chr2 230184874 230185317 -23071266 - MLT1D LTR MaLR -3 502 5 2655 103 8 16 chr2 230185582 230185960 -23070623 + THE1C LTR MaLR 1 375 0 1664 195 68 21 chr2 230186754 230187092 -23069491 + MLT1A1 LTR MaLR 12 365 0 2564 106 8 16 chr2 230187113 230187491 -23069092 + THE1C LTR MaLR 1 375 0 475 262 115 48 chr2 230187752 230188004 -23068579 - L1ME4a LINE L1 -59 6062 5794 464 233 0 0 chr2 230188642 230188745 -23067838 - MER103 DNA DNA -43 123 21 2394 176 72 51 chr2 230189142 230189755 -23066828 + MLT1E2 LTR MaLR 1 626 0 2604 107 19 0 chr2 230189778 230190144 -23066439 - THE1C LTR MaLR -2 373 1 269 270 178 33 chr2 230190474 230190626 -23065957 + MIR3 SINE MIR 20 193 -15 531 291 94 27 chr2 230191860 230192083 -23064500 + MIR SINE MIR 19 256 -6 244 266 7 7 chr2 230192089 230192232 -23064351 + (CAT)n Simple_repeat Simple_repeat 2 144 0 2475 185 14 46 chr2 230192664 230193225 -23063358 - LTR55 LTR ERV -5 543 1 1877 153 10 0 chr2 230193339 230193633 -23062950 + AluJb SINE Alu 5 301 -11 438 310 21 0 chr2 230193646 230193788 -23062795 - MIR SINE MIR -31 231 87 180 0 0 0 chr2 230194725 230194745 -23061838 + (TC)n Simple_repeat Simple_repeat 2 21 0 2218 116 0 0 chr2 230194745 230195038 -23061545 - AluSx SINE Alu -19 293 1 1045 142 6 0 chr2 230195175 230195332 -23061251 - MLT1B LTR MaLR 0 390 233 1551 166 53 86 chr2 230195332 230195706 -23060877 + MLT1A2 LTR MaLR 2 363 -11 1332 168 13 17 chr2 230195704 230195936 -23060647 - MLT1B LTR MaLR -158 232 2 * 927 296 51 24 chr2 230196019 230196648 -23059935 + L2 LINE L2 2672 3313 0 3122 106 2 7 chr2 230196765 230197201 -23059382 - MER57B LTR ERV1 0 434 1 227 338 14 0 chr2 230197207 230197281 -23059302 - MIR3 SINE MIR -49 159 85 21 36 0 0 chr2 230198719 230198747 -23057836 + AT_rich Low_complexity Low_complexity 1 28 0 242 303 40 0 chr2 230198756 230198855 -23057728 - MIR SINE MIR -2 260 158 247 54 108 0 chr2 230198855 230198892 -23057691 - MLT2B2 LTR ERVL 0 515 475 * 878 151 4 178 chr2 230198859 230199099 -23057484 - MLT2D LTR ERVL -8 389 209 1030 207 10 5 chr2 230199257 230199460 -23057123 - MLT2D LTR ERVL -208 206 3 320 293 0 68 chr2 230199467 230199526 -23057057 - MIR SINE MIR -111 151 90 2215 201 41 18 chr2 230199526 230200018 -23056565 + MLT1D LTR MaLR 3 505 0 320 293 0 68 chr2 230200018 230200105 -23056478 - MIR SINE MIR -172 90 15 605 238 98 10 chr2 230200319 230200512 -23056071 - MIR SINE MIR -13 249 40 214 345 0 0 chr2 230201552 230201610 -23054973 + polypyrimidine Low_complexity Low_complexity 4 61 0 303 143 57 0 chr2 230201610 230201680 -23054903 - L1MC5 LINE L1 -250 7711 7638 548 257 62 65 chr2 230201695 230201919 -23054664 - L1MC4 LINE L1 -355 7687 7464 1748 166 7 23 chr2 230201919 230202227 -23054356 - AluJo SINE Alu -9 303 1 548 257 62 65 chr2 230202227 230202355 -23054228 - L1MC4 LINE L1 -578 7464 7337 430 135 81 0 chr2 230202355 230202429 -23054154 - MER116 DNA Mariner 0 80 1 548 257 62 65 chr2 230202429 230202596 -23053987 - L1MC4 LINE L1 -705 7337 5431 595 228 0 16 chr2 230202814 230202941 -23053642 - FLAM_C SINE Alu -18 125 1 235 344 39 16 chr2 230203295 230203423 -23053160 + MIR SINE MIR 17 147 -61 2426 95 0 0 chr2 230205757 230206062 -23050521 + AluSx SINE Alu 1 305 -7 413 293 58 97 chr2 230206457 230206862 -23049721 + L2 LINE L2 2364 2739 -575 2429 76 0 13 chr2 230206862 230207166 -23049417 - AluY SINE Alu -11 300 1 413 293 58 97 chr2 230207166 230207368 -23049215 + L2 LINE L2 2739 2947 -367 312 316 125 7 chr2 230207409 230207545 -23049038 + L2 LINE L2 3121 3272 0 1699 123 0 0 chr2 230207562 230207781 -23048802 + AluSx SINE Alu 1 219 -93 2399 83 0 0 chr2 230208355 230208644 -23047939 + AluSg SINE Alu 1 289 -21 205 192 0 51 chr2 230209642 230209720 -23046863 + CT-rich Low_complexity Low_complexity 4 77 0 355 286 113 39 chr2 230210505 230210893 -23045690 - L1ME4a LINE L1 -100 6021 5605 238 282 47 0 chr2 230211211 230211296 -23045287 - L2 LINE L2 0 3313 3225 359 83 17 0 chr2 230211324 230211384 -23045199 + (GA)n Simple_repeat Simple_repeat 2 62 0 2175 103 0 0 chr2 230211539 230211840 -23044743 + AluSx SINE Alu 1 301 0 270 106 0 0 chr2 230213100 230213147 -23043436 + (TC)n Simple_repeat Simple_repeat 1 47 0 327 25 0 0 chr2 230213147 230213187 -23043396 + (TG)n Simple_repeat Simple_repeat 1 40 0 339 256 23 53 chr2 230213279 230213412 -23043171 + MER5A DNA MER1_type 17 145 -44 2411 98 0 0 chr2 230213414 230213720 -23042863 - AluSc SINE Alu -3 306 1 230 59 0 0 chr2 230213833 230213867 -23042716 + MIR SINE MIR 110 143 -65 769 277 42 8 chr2 230214800 230215038 -23041545 + MARNA DNA Mariner 242 487 -99 272 217 198 38 chr2 230215380 230215486 -23041097 + MER103 DNA DNA 43 165 -1 266 333 60 0 chr2 230215556 230215673 -23040910 - MIR3 SINE MIR -36 172 49 3748 156 57 19 chr2 230215941 230216680 -23039903 - LTR1B LTR ERV1 0 785 1 413 265 72 105 chr2 230216728 230216773 -23039810 + MLT1H LTR MaLR 64 109 -300 2193 146 31 16 chr2 230216773 230217157 -23039426 + MLT1B LTR MaLR 1 390 0 413 265 72 105 chr2 230217157 230217446 -23039137 + MLT1H LTR MaLR 109 384 -25 450 194 74 9 chr2 230217472 230217580 -23039003 + L2 LINE L2 3143 3257 -15 832 210 0 11 chr2 230217752 230217928 -23038655 - MER69A DNA AcHobo -2 175 2 1135 231 100 43 chr2 230218014 230218087 -23038496 - MLT1J1 LTR MaLR 0 446 379 2473 145 93 2 chr2 230218087 230218248 -23038335 + MLT1C LTR MaLR 1 146 -321 261 0 0 0 chr2 230218248 230218277 -23038306 + (CA)n Simple_repeat Simple_repeat 2 30 0 2473 145 93 2 chr2 230218277 230218543 -23038040 + MLT1C LTR MaLR 146 467 0 1135 231 100 43 chr2 230218543 230218888 -23037695 - MLT1J1 LTR MaLR -67 379 4 259 269 221 0 chr2 230219741 230219845 -23036738 - L2 LINE L2 -1 3271 3145 2196 138 33 25 chr2 230220168 230220529 -23036054 + THE1B LTR MaLR 1 364 0 264 179 39 13 chr2 230220558 230220636 -23035947 + CT-rich Low_complexity Low_complexity 1 80 0 1493 184 34 14 chr2 230221059 230221353 -23035230 + MER58B DNA MER1_type 42 341 0 2329 110 3 0 chr2 230221463 230221764 -23034819 + AluSx SINE Alu 1 302 -10 538 260 138 6 chr2 230221874 230222055 -23034528 + MIR SINE MIR 41 245 -17 203 260 0 0 chr2 230222110 230222160 -23034423 + MIR SINE MIR 179 228 -34 528 234 78 28 chr2 230222740 230222881 -23033702 + MIR SINE MIR 12 159 -103 1549 215 103 101 chr2 230222887 230223423 -23033160 + MLT1F LTR MaLR 6 542 0 2300 106 0 0 chr2 230223442 230223735 -23032848 - AluSc SINE Alu -16 293 1 505 211 211 84 chr2 230224855 230225092 -23031491 + MLT1J2 LTR MaLR 53 319 -131 554 233 27 7 chr2 230225212 230225358 -23031225 - MIR SINE MIR -56 206 58 1812 207 20 3 chr2 230225771 230226128 -23030455 + MLT1A1 LTR MaLR 1 363 -2 735 261 59 22 chr2 230226252 230226524 -23030059 - LTR16A1 LTR ERVL -30 427 146 322 346 205 0 chr2 230227160 230227316 -23029267 - MER91A DNA MER1_type -7 189 2 1231 249 113 36 chr2 230227534 230228063 -23028520 + MLT1G LTR MaLR 11 580 -10 2254 131 0 0 chr2 230229495 230229801 -23026782 + AluSx SINE Alu 1 306 -6 361 339 93 19 chr2 230230347 230230604 -23025979 - L2 LINE L2 -1 3271 2996 234 322 44 0 chr2 230231963 230232053 -23024530 - L2 LINE L2 -19 3253 3160 887 228 42 10 chr2 230232215 230232408 -23024175 + MER20 DNA MER1_type 16 214 -5 1622 216 28 15 chr2 230233189 230233578 -23023005 - MSTD LTR MaLR -2 394 1 687 319 31 55 chr2 230233824 230234176 -23022407 - L1ME LINE L1 -335 5786 5441 205 294 0 5 chr2 230234444 230234564 -23022019 + MIR SINE MIR 59 237 -25 210 71 0 0 chr2 230234576 230234604 -23021979 + (TAA)n Simple_repeat Simple_repeat 1 28 0 376 194 54 11 chr2 230234608 230234701 -23021882 - MIR SINE MIR -74 188 92 1333 265 145 5 chr2 230234717 230235110 -23021473 - MER69 DNA AcHobo -2068 458 11 271 327 88 0 chr2 230235803 230235916 -23020667 + MIR SINE MIR 21 143 -65 2125 96 41 14 chr2 230236120 230236413 -23020170 - AluSp SINE Alu -12 301 1 12870 188 62 70 chr2 230236416 230237338 -23019245 - L1MA9 LINE L1 0 7355 6427 3983 101 33 39 chr2 230237338 230237972 -23018611 - L1MA2 LINE L1 0 6304 5675 12870 188 62 70 chr2 230237972 230239875 -23016708 - L1MA9 LINE L1 -928 6427 4510 2431 80 0 7 chr2 230239875 230240175 -23016408 + AluY SINE Alu 1 298 -13 1025 129 60 46 chr2 230240177 230240394 -23016189 - L1MA5A LINE L1 -11 6286 6067 12870 188 62 70 chr2 230240394 230240920 -23015663 - L1MA9 LINE L1 -2846 4509 3980 636 226 0 0 chr2 230240920 230241035 -23015548 + FLAM_A SINE Alu 4 118 -15 12870 188 62 70 chr2 230241035 230243137 -23013446 - L1MA9 LINE L1 -3375 3980 2263 2206 113 0 7 chr2 230243137 230243437 -23013146 - AluSc SINE Alu 0 309 12 12870 188 62 70 chr2 230243437 230244083 -23012500 - L1MA9 LINE L1 -5092 2263 1613 325 288 46 33 chr2 230244828 230244981 -23011602 - L1MA9 LINE L1 -5982 1116 962 26 30 0 0 chr2 230245017 230245050 -23011533 + AT_rich Low_complexity Low_complexity 1 33 0 7693 32 21 1 chr2 230245050 230246659 -23009924 - L1PA4 LINE L1 -3 6152 4527 42186 37 5 1 chr2 230246967 230251990 -23004593 - L1P LINE L1 -1104 5042 1 695 258 178 19 chr2 230252790 230253274 -23003309 - L2 LINE L2 -2 3311 2749 191 231 19 0 chr2 230253654 230253706 -23002877 + L2 LINE L2 3261 3313 0 1987 107 0 15 chr2 230255237 230255509 -23001074 - AluSx SINE Alu -11 301 34 375 287 127 13 chr2 230255554 230255711 -23000872 + MIR SINE MIR 36 210 -52 2296 91 3 3 chr2 230256240 230256536 -23000047 + AluSx SINE Alu 1 296 -16 207 0 0 0 chr2 230256899 230256922 -22999661 + (TG)n Simple_repeat Simple_repeat 2 24 0 2070 136 3 0 chr2 230257778 230258072 -22998511 + AluSx SINE Alu 3 297 -15 354 269 186 0 chr2 230258099 230258244 -22998339 + MIR3 SINE MIR 36 207 -1 1270 237 100 21 chr2 230258253 230258722 -22997861 - MLT1J LTR MaLR -1 510 5 791 193 29 12 chr2 230260202 230260373 -22996210 + MER5B DNA MER1_type 2 175 -3 182 352 124 0 chr2 230260389 230260494 -22996089 - MIR3 SINE MIR -89 119 2 403 135 0 54 chr2 230260631 230260705 -22995878 - MER5A DNA MER1_type -119 70 1 180 0 0 0 chr2 230260959 230260979 -22995604 + (T)n Simple_repeat Simple_repeat 1 20 0 586 207 59 0 chr2 230262857 230262992 -22993591 + MER5A DNA MER1_type 45 187 -2 323 186 43 0 chr2 230264610 230264680 -22991903 + LTR33 LTR ERVL 6 78 -443 759 254 57 12 chr2 230265099 230265474 -22991109 + LTR33 LTR ERVL 108 519 -2 3152 94 26 35 chr2 230265677 230266134 -22990449 - MLT2A2 LTR ERVL 0 453 1 274 146 0 0 chr2 230266332 230266380 -22990203 - L1MB3 LINE L1 -7 6176 6129 5704 156 62 21 chr2 230266382 230266905 -22989678 - L1MA9 LINE L1 -3 6309 5809 312 102 0 0 chr2 230266905 230266954 -22989629 + (TG)n Simple_repeat Simple_repeat 2 50 0 5704 156 62 21 chr2 230266954 230267680 -22988903 - L1MA9 LINE L1 -503 5809 4957 1782 187 0 7 chr2 230267680 230267974 -22988609 + AluJo SINE Alu 1 292 -20 5704 156 62 21 chr2 230267974 230268307 -22988276 - L1MA9 LINE L1 -1355 4957 4639 2383 100 3 0 chr2 230268309 230268619 -22987964 - AluY SINE Alu 0 311 1 2344 162 22 39 chr2 230268633 230269096 -22987487 - L1MB4 LINE L1 -41 6139 5685 810 163 0 0 chr2 230269128 230269251 -22987332 - FLAM_C SINE Alu -20 123 1 453 264 164 0 chr2 230269768 230269985 -22986598 - MIR SINE MIR -3 259 9 1514 131 0 0 chr2 230271488 230271710 -22984873 - AluSg/x SINE Alu -5 307 86 2243 90 0 7 chr2 230272309 230272597 -22983986 - AluSq SINE Alu -27 286 1 2557 226 27 6 chr2 230272756 230273282 -22983301 + MLT1F LTR MaLR 6 542 0 210 344 102 0 chr2 230274075 230274203 -22982380 + MIR SINE MIR 70 210 -52 225 203 81 54 chr2 230274289 230274363 -22982220 + MIR3 SINE MIR 84 159 -49 866 304 75 36 chr2 230275134 230275599 -22980984 - L1MC4a LINE L1 -1882 5926 5432 1914 151 0 10 chr2 230275599 230275891 -22980692 - AluSx SINE Alu -23 289 1 866 304 75 36 chr2 230275891 230276013 -22980570 - L1MC4a LINE L1 -2376 5432 5316 24 0 0 0 chr2 230276438 230276462 -22980121 + AT_rich Low_complexity Low_complexity 1 24 0 492 272 22 0 chr2 230277584 230277720 -22978863 + MIR3 SINE MIR 45 183 -25 548 267 110 11 chr2 230277808 230277999 -22978584 + MIR SINE MIR 46 255 -7 2135 163 133 37 chr2 230278341 230278778 -22977805 - MLT2B1 LTR ERVL -41 479 1 1130 132 33 6 chr2 230278778 230278959 -22977624 + MLT1B LTR MaLR 205 390 0 819 293 28 82 chr2 230278959 230279468 -22977115 + LTR67 LTR ERVL 77 557 0 297 229 49 90 chr2 230280746 230280868 -22975715 - MLT1K LTR MaLR -2 586 470 383 337 19 4 chr2 230280957 230281168 -22975415 - MLT1K LTR MaLR -280 308 12 192 216 0 0 chr2 230281389 230281440 -22975143 + (TG)n Simple_repeat Simple_repeat 1 51 0 218 356 0 11 chr2 230281503 230281590 -22974993 + CT-rich Low_complexity Low_complexity 3 88 0 2129 93 3 72 chr2 230283069 230283402 -22973181 + AluSx SINE Alu 1 310 -2 519 45 0 0 chr2 230283797 230283863 -22972720 + (TGGGGG)n Simple_repeat Simple_repeat 1 66 0 3646 169 36 0 chr2 230284818 230285457 -22971126 - L1MB3 LINE L1 0 6183 5522 189 0 0 0 chr2 230285822 230285843 -22970740 + (T)n Simple_repeat Simple_repeat 1 21 0 273 176 20 0 chr2 230285884 230285935 -22970648 - MIR SINE MIR -8 254 203 185 333 85 56 chr2 230286525 230286903 -22969680 + L2 LINE L2 2372 2760 -554 374 260 73 0 chr2 230287101 230287197 -22969386 + L2 LINE L2 3211 3313 0 2201 138 0 0 chr2 230287363 230287674 -22968909 + AluSx SINE Alu 1 311 -1 421 216 21 0 chr2 230288015 230288112 -22968471 + MIR SINE MIR 66 164 -98 244 261 58 0 chr2 230288128 230288197 -22968386 - MIR SINE MIR -12 250 178 725 275 172 47 chr2 230288283 230288749 -22967834 + MLT1K LTR MaLR 8 531 -57 29 28 0 0 chr2 230288816 230288852 -22967731 + AT_rich Low_complexity Low_complexity 1 36 0 689 252 61 20 chr2 230289506 230289752 -22966831 + MIR SINE MIR 7 262 0 197 216 39 0 chr2 230289784 230289835 -22966748 - MIR SINE MIR -66 142 90 873 241 23 5 chr2 230290898 230291118 -22965465 - MIR SINE MIR -10 252 29 311 270 30 10 chr2 230291224 230291324 -22965259 - MER103 DNA DNA -40 126 25 410 221 12 0 chr2 230291589 230291675 -22964908 - L1MC4 LINE L1 0 8042 7956 * 4971 223 44 12 chr2 230291667 230292873 -22963710 - L1MC4 LINE L1 -306 7736 6493 227 225 14 0 chr2 230293009 230293080 -22963503 + GA-rich Low_complexity Low_complexity 2 73 0 380 357 23 0 chr2 230293236 230293407 -22963176 + L3 LINE CR1 1313 1487 -90 2391 96 0 0 chr2 230294041 230294343 -22962240 - AluSx SINE Alu -10 302 1 2392 96 3 0 chr2 230294653 230294954 -22961629 - AluSp SINE Alu -11 302 1 425 275 88 25 chr2 230295272 230295432 -22961151 - MIR SINE MIR -58 204 35 202 216 0 0 chr2 230295849 230295886 -22960697 + (TCCA)n Simple_repeat Simple_repeat 4 40 0 182 37 37 0 chr2 230295938 230295965 -22960618 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 489 313 105 32 chr2 230297148 230297528 -22959055 - L3 LINE CR1 -34 1543 1136 583 295 148 33 chr2 230297894 230298337 -22958246 + L2 LINE L2 2543 3038 -234 978 104 0 0 chr2 230298390 230298515 -22958068 - FLAM_C SINE Alu -18 125 1 227 257 48 121 chr2 230298515 230298764 -22957819 + L2 LINE L2 3083 3313 0 1337 193 35 15 chr2 230299290 230299702 -22956881 - MLT1C LTR MaLR -4 463 15 254 333 86 0 chr2 230299714 230299807 -22956776 - MIR SINE MIR -85 123 23 2105 130 41 35 chr2 230299888 230300233 -22956350 + THE1B LTR MaLR 2 348 -16 307 113 32 0 chr2 230300284 230300346 -22956237 + (TA)n Simple_repeat Simple_repeat 2 65 0 684 294 44 11 chr2 230301345 230301453 -22955130 - MLT1L LTR MaLR -185 430 327 2491 103 16 21 chr2 230301453 230301830 -22954753 - THE1C LTR MaLR 0 375 1 684 294 44 11 chr2 230301830 230301993 -22954590 - MLT1L LTR MaLR -288 327 150 428 288 15 8 chr2 230302080 230302212 -22954371 - MLT1L LTR MaLR -17 598 466 361 257 92 106 chr2 230302263 230302621 -22953962 - MLT1L LTR MaLR -240 375 23 183 156 0 0 chr2 230303533 230303565 -22953018 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 2133 136 7 7 chr2 230304820 230305128 -22951455 + AluSx SINE Alu 1 308 -4 733 127 8 0 chr2 230306463 230306581 -22950002 - AluY SINE Alu -7 304 186 24 32 0 0 chr2 230307251 230307282 -22949301 + AT_rich Low_complexity Low_complexity 1 31 0 4247 137 29 47 chr2 230307629 230308308 -22948275 - MER4E LTR ERV1 -10 769 104 4191 88 7 7 chr2 230308308 230308862 -22947721 + MER41A LTR ERV1 1 554 0 4247 137 29 47 chr2 230308862 230308965 -22947618 - MER4E LTR ERV1 -675 104 1 3917 123 55 3 chr2 230309238 230309842 -22946741 + MER41B LTR ERV1 1 635 0 4010 115 25 31 chr2 230310629 230311135 -22945448 + MER41B LTR ERV1 1 504 -131 1192 59 0 20 chr2 230311135 230311287 -22945296 - L1PA8 LINE L1 -6 6166 6018 4010 115 25 31 chr2 230311287 230311417 -22945166 + MER41B LTR ERV1 504 633 -2 419 185 208 8 chr2 230311568 230311698 -22944885 + MIR SINE MIR 86 241 -21 296 336 23 8 chr2 230313135 230313266 -22943317 + CT-rich Low_complexity Low_complexity 5 137 0 1674 181 0 32 chr2 230313409 230313718 -22942865 + AluJo SINE Alu 4 302 -10 1569 166 80 70 chr2 230313730 230314199 -22942384 + MER31A LTR ERV1 1 651 -10 693 66 0 0 chr2 230314349 230314440 -22942143 + (TTCC)n Simple_repeat Simple_repeat 4 94 0 1473 123 7 110 chr2 230314443 230314735 -22941848 - AluSx SINE Alu -1 311 50 235 260 20 10 chr2 230314998 230315098 -22941485 + (TA)n Simple_repeat Simple_repeat 2 102 0 378 0 0 0 chr2 230315209 230315251 -22941332 + (TTA)n Simple_repeat Simple_repeat 2 43 0 577 87 43 11 chr2 230315371 230315463 -22941120 - L1PB1 LINE L1 -4 6147 6053 281 312 81 0 chr2 230315514 230315687 -22940896 - L1MDb LINE L1 -4921 1487 1301 421 269 84 13 chr2 230315711 230316003 -22940580 - L1MDb LINE L1 -4940 1456 1137 1895 115 17 54 chr2 230316044 230316361 -22940222 - AluSx SINE Alu 0 306 1 453 281 30 18 chr2 230317045 230317212 -22939371 - MIR SINE MIR -58 204 36 252 0 0 0 chr2 230319473 230319501 -22937082 + (T)n Simple_repeat Simple_repeat 1 28 0 307 164 30 0 chr2 230319749 230319816 -22936767 + MER53 DNA DNA 9 77 -112 * 402 158 98 0 chr2 230319756 230319838 -22936745 - MER53 DNA DNA -6 183 94 717 106 0 99 chr2 230319844 230319986 -22936597 - MER53 DNA DNA -61 128 1 784 208 13 0 chr2 230320315 230320474 -22936109 - MER5A DNA MER1_type -16 173 13 1123 144 118 55 chr2 230320494 230320765 -22935818 + MER33 DNA MER1_type 2 289 -35 541 345 108 0 chr2 230321367 230321645 -22934938 + L3b LINE CR1 1104 1411 -172 702 147 31 47 chr2 230322042 230322171 -22934412 - MER63 DNA MER1_type -302 760 8 530 320 44 17 chr2 230322309 230322679 -22933904 + LTR16C LTR ERVL 80 491 0 676 266 129 80 chr2 230322681 230323024 -22933559 - LTR67 LTR ERVL -87 470 111 821 272 144 58 chr2 230323024 230323510 -22933073 - MLT1H LTR MaLR 0 549 22 271 294 11 33 chr2 230323537 230323629 -22932954 - LTR67 LTR ERVL -466 91 2 2094 66 21 108 chr2 230324023 230324355 -22932228 + AluYb8 SINE Alu 1 303 -15 201 289 37 89 chr2 230324510 230324645 -22931938 - MIR SINE MIR -128 134 7 405 235 114 30 chr2 230324715 230324847 -22931736 + MIR SINE MIR 15 157 -105 568 307 16 40 chr2 230325487 230325738 -22930845 - MIR SINE MIR -2 260 16 252 312 131 30 chr2 230325887 230326086 -22930497 + MLT1K LTR MaLR 277 495 -93 426 280 138 38 chr2 230326114 230326375 -22930208 + MLT1J LTR MaLR 1 287 -224 2003 156 0 13 chr2 230326541 230326848 -22929735 - AluSx SINE Alu -9 303 1 724 260 181 30 chr2 230326908 230327364 -22929219 - MLT1G LTR MaLR 0 590 12 2122 148 120 5 chr2 230328339 230328723 -22927860 + MSTA LTR MaLR 1 428 0 2343 178 34 5 chr2 230329529 230329940 -22926643 - MSTB1 LTR MaLR -5 427 5 2608 71 0 0 chr2 230330330 230330640 -22925943 + AluY SINE Alu 1 310 -1 14749 125 34 10 chr2 230331050 230333378 -22923205 - Tigger1 DNA MER2_type -34 2384 1 23 0 0 0 chr2 230333823 230333846 -22922737 + AT_rich Low_complexity Low_complexity 1 23 0 2363 109 0 0 chr2 230334187 230334499 -22922084 - AluSx SINE Alu 0 312 1 421 283 81 37 chr2 230334824 230335079 -22921504 - LTR33 LTR ERVL -50 471 125 1582 157 62 104 chr2 230335079 230335117 -22921466 - MLT2D LTR ERVL 0 414 376 261 0 0 0 chr2 230335117 230335146 -22921437 + (TG)n Simple_repeat Simple_repeat 1 29 0 1582 157 62 104 chr2 230335146 230335539 -22921044 - MLT2D LTR ERVL -38 376 1 421 283 81 37 chr2 230335539 230335653 -22920930 - LTR33 LTR ERVL -396 125 18 224 310 95 0 chr2 230336032 230336148 -22920435 + L3b LINE CR1 1289 1415 -168 1133 224 104 76 chr2 230337302 230337636 -22918947 - MLT1J LTR MaLR -38 473 121 2661 188 65 54 chr2 230337636 230338279 -22918304 - MLT1E1 LTR MaLR 0 654 5 1133 224 104 76 chr2 230338279 230338404 -22918179 - MLT1J LTR MaLR -390 121 1 264 250 113 0 chr2 230338407 230338487 -22918096 + MIR SINE MIR 72 160 -102 193 329 24 12 chr2 230340326 230340408 -22916175 - MIR SINE MIR -6 256 174 226 316 34 51 chr2 230340571 230340688 -22915895 - L2 LINE L2 -210 3062 2948 340 96 0 39 chr2 230341399 230341451 -22915132 + MADE1 DNA Mariner 1 50 -30 1868 203 120 2 chr2 230341711 230342129 -22914454 - MLT1C LTR MaLR 0 467 1 180 237 0 0 chr2 230342743 230342781 -22913802 + MIR SINE MIR 104 141 -67 414 251 51 51 chr2 230342864 230343059 -22913524 - MIR SINE MIR -48 214 22 407 244 43 35 chr2 230343104 230343219 -22913364 - L2 LINE L2 -2 3270 3155 304 236 57 73 chr2 230343661 230343784 -22912799 + MIR SINE MIR 63 183 -79 499 99 99 0 chr2 230344002 230344073 -22912510 + MADE1 DNA Mariner 3 80 0 2309 124 48 25 chr2 230345615 230345971 -22910612 - THE1B LTR MaLR 0 364 1 180 268 71 0 chr2 230346650 230346706 -22909877 + MIR SINE MIR 38 97 -111 255 281 45 45 chr2 230347647 230347736 -22908847 + MIR SINE MIR 13 101 -161 709 260 87 5 chr2 230347902 230348098 -22908485 - MIR SINE MIR 0 262 51 461 229 18 0 chr2 230349778 230349887 -22906696 + MER103 DNA DNA 3 113 -53 308 24 24 0 chr2 230350149 230350190 -22906393 + (TG)n Simple_repeat Simple_repeat 2 43 0 238 305 143 39 chr2 230351832 230351986 -22904597 - MER91A DNA MER1_type -26 170 1 1248 200 37 0 chr2 230352199 230352414 -22904169 + MER58A DNA MER1_type 2 224 0 498 258 50 13 chr2 230352446 230352605 -22903978 + MIR SINE MIR 47 211 -51 249 271 42 31 chr2 230352616 230352712 -22903871 + MIR3 SINE MIR 64 160 -48 475 233 151 38 chr2 230352721 230352854 -22903729 - MER5A DNA MER1_type -9 180 25 1797 217 50 18 chr2 230352854 230353255 -22903328 - MLT2D LTR ERVL 0 414 1 475 233 151 38 chr2 230353255 230353280 -22903303 - MER5A DNA MER1_type -164 25 4 433 268 43 49 chr2 230354022 230354186 -22902397 + MIR SINE MIR 2 164 -98 495 348 27 0 chr2 230354401 230354585 -22901998 + MIR SINE MIR 53 241 -21 552 199 61 77 chr2 230355067 230355248 -22901335 + MER5B DNA MER1_type 1 178 0 270 361 83 35 chr2 230355418 230355587 -22900996 + L2 LINE L2 3088 3264 -8 244 313 0 15 chr2 230355605 230355672 -22900911 + L2 LINE L2 3242 3307 -6 23 0 0 0 chr2 230355974 230355997 -22900586 + AT_rich Low_complexity Low_complexity 1 23 0 324 366 15 0 chr2 230356050 230356181 -22900402 + MIR3 SINE MIR 28 160 -48 232 269 77 0 chr2 230356325 230356403 -22900180 + MER103 DNA DNA 36 119 -47 329 305 78 21 chr2 230356726 230356867 -22899716 + MIR SINE MIR 3 151 -111 2235 106 0 7 chr2 230356915 230357217 -22899366 - AluSg SINE Alu -10 300 1 455 294 101 34 chr2 230357293 230357531 -22899052 + MLT1K LTR MaLR 148 401 -187 * 585 257 158 22 chr2 230357526 230357748 -22898835 + MLT1J LTR MaLR 258 509 -2 2004 169 39 29 chr2 230357838 230358223 -22898360 + MLT1B LTR MaLR 1 389 -1 21 0 0 0 chr2 230358808 230358829 -22897754 + AT_rich Low_complexity Low_complexity 1 21 0 351 0 0 0 chr2 230359918 230359957 -22896626 + (TG)n Simple_repeat Simple_repeat 1 39 0 2223 205 71 50 chr2 230360270 230360807 -22895776 + LTR55 LTR ERV 1 548 0 216 0 0 0 chr2 230361130 230361154 -22895429 + (CA)n Simple_repeat Simple_repeat 2 25 0 29 28 0 0 chr2 230361154 230361190 -22895393 + AT_rich Low_complexity Low_complexity 1 36 0 190 254 143 0 chr2 230361536 230361599 -22894984 + MIR SINE MIR 78 149 -113 311 314 57 9 chr2 230362803 230363032 -22893551 - L1 LINE L1 -2843 3303 3064 213 211 0 0 chr2 230363115 230363153 -22893430 + (TATG)n Simple_repeat Simple_repeat 1 38 0 23 33 0 0 chr2 230363156 230363186 -22893397 + AT_rich Low_complexity Low_complexity 1 30 0 1823 119 48 31 chr2 230363201 230363495 -22893088 - MSTB LTR MaLR -127 299 1 180 77 0 0 chr2 230363643 230363669 -22892914 + (CCCA)n Simple_repeat Simple_repeat 4 29 0 491 218 36 0 chr2 230363848 230363958 -22892625 - LTR16C LTR ERVL -12 479 366 43718 32 22 1 chr2 230364023 230370078 -22886505 + L1PA2 LINE L1 1 6185 0 1837 215 67 21 chr2 230370082 230370547 -22886036 - L1ME2 LINE L1 -6 6158 5673 1078 210 73 35 chr2 230370585 230370936 -22885647 + MLT1A1 LTR MaLR 1 428 0 8621 207 25 43 chr2 230370936 230372703 -22883880 + MLT1A1-int LTR MaLR 1 1735 0 1167 212 81 58 chr2 230372703 230373048 -22883535 + MLT1A1 LTR MaLR 1 353 -12 1411 219 91 7 chr2 230373059 230373565 -22883018 - L1ME2 LINE L1 -512 5652 5122 6635 163 39 112 chr2 230373595 230374242 -22882341 - L1 LINE L1 -1696 4450 3757 510 62 0 0 chr2 230374242 230374306 -22882277 - L1PA7 LINE L1 -11 6143 6080 6635 163 39 112 chr2 230374306 230375566 -22881017 - L1 LINE L1 -2389 3757 2683 2372 199 144 44 chr2 230375578 230376418 -22880165 - L1ME2 LINE L1 -1353 4793 3870 372 322 44 39 chr2 230376815 230376995 -22879588 + MER5A DNA MER1_type 9 189 0 285 317 19 0 chr2 230377058 230377162 -22879421 + MIR3 SINE MIR 101 206 -2 805 234 63 17 chr2 230377829 230378068 -22878515 - MIR SINE MIR -11 251 2 475 161 172 0 chr2 230378184 230378277 -22878306 + FRAM SINE Alu 67 175 -1 543 247 77 24 chr2 230378838 230379008 -22877575 + MIR SINE MIR 63 241 -21 306 353 8 17 chr2 230379053 230379172 -22877411 + MIR3 SINE MIR 85 202 -6 2197 200 157 6 chr2 230381801 230382153 -22874430 + L1ME1 LINE L1 5376 5674 -491 1732 173 0 36 chr2 230382153 230382460 -22874123 + AluJb SINE Alu 1 296 -16 2197 200 157 6 chr2 230382460 230382759 -22873824 + L1ME1 LINE L1 5674 6161 -4 651 208 13 27 chr2 230382789 230382938 -22873645 + L1ME LINE L1 5556 5702 -464 614 79 0 0 chr2 230384174 230384250 -22872333 - MADE1 DNA Mariner -2 78 3 2023 206 111 15 chr2 230384765 230385226 -22871357 - MLT1D LTR MaLR 0 505 1 2264 112 49 26 chr2 230385290 230385639 -22870944 + THE1B LTR MaLR 8 364 0 1717 182 17 7 chr2 230385761 230386058 -22870525 - AluJo SINE Alu -12 300 1 532 181 13 110 chr2 230386069 230386184 -22870399 - L1ME2 LINE L1 -10 6154 6056 2506 71 0 3 chr2 230386184 230386495 -22870088 + AluY SINE Alu 1 310 -1 532 181 13 110 chr2 230386495 230386534 -22870049 - L1ME2 LINE L1 -108 6056 6015 614 241 68 32 chr2 230386614 230386834 -22869749 - L1ME2 LINE L1 -285 5879 5652 2396 255 85 94 chr2 230386861 230387615 -22868968 - L1ME LINE L1 -4178 1902 1143 2409 103 0 0 chr2 230387615 230387926 -22868657 - AluY SINE Alu 0 311 1 2396 255 85 94 chr2 230387926 230388013 -22868570 - L1ME LINE L1 -4937 1143 1057 1873 141 25 0 chr2 230388013 230388290 -22868293 - AluSx SINE Alu -24 288 5 2396 255 85 94 chr2 230388290 230388383 -22868200 - L1ME LINE L1 -5023 1057 965 1752 172 0 4 chr2 230388383 230388662 -22867921 - AluJb SINE Alu -19 293 16 2396 255 85 94 chr2 230388662 230388681 -22867902 - L1ME LINE L1 -5115 965 947 2314 103 0 0 chr2 230388681 230388972 -22867611 - AluY SINE Alu -20 291 1 2396 255 85 94 chr2 230388972 230389948 -22866635 - L1ME LINE L1 -5133 947 19 556 217 17 0 chr2 230391219 230391334 -22865249 - MARNA DNA Mariner -9 577 461 216 233 194 10 chr2 230391334 230391437 -22865146 + MIR SINE MIR 127 248 -14 311 44 22 0 chr2 230391600 230391645 -22864938 + (TG)n Simple_repeat Simple_repeat 1 46 0 294 29 0 0 chr2 230391702 230391737 -22864846 + (TG)n Simple_repeat Simple_repeat 2 36 0 2502 158 129 10 chr2 230391742 230392237 -22864346 + LTR64 LTR ERVK 5 558 0 568 245 58 0 chr2 230392383 230392538 -22864045 + MER5B DNA MER1_type 1 164 -14 539 249 6 48 chr2 230392557 230392722 -22863861 - MER5B DNA MER1_type -2 176 19 1381 113 75 144 chr2 230392722 230393093 -22863490 - MER4A LTR ERV1 0 664 261 611 113 21 10 chr2 230393093 230393190 -22863393 - MER4A LTR ERV1 -566 98 1 544 264 87 52 chr2 230393210 230393403 -22863180 - MER102b DNA MER1_type -1106 322 118 3397 126 75 16 chr2 230393403 230393976 -22862607 - L1MB3 LINE L1 -1 6182 5576 544 264 87 52 chr2 230393976 230394013 -22862570 - MER102b DNA MER1_type -1310 118 84 349 148 49 0 chr2 230394107 230394168 -22862415 + MIR3 SINE MIR 97 160 -48 4382 161 31 25 chr2 230394957 230395567 -22861016 + LTR39 LTR ERV1 1 619 -164 1413 97 116 5 chr2 230395567 230395677 -22860906 - MER30 DNA MER1_type 0 230 134 192 40 0 0 chr2 230395677 230395702 -22860881 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 1413 97 116 5 chr2 230395702 230395798 -22860785 - MER30 DNA MER1_type -96 134 1 4382 161 31 25 chr2 230395798 230395964 -22860619 + LTR39 LTR ERV1 619 782 -1 347 302 156 14 chr2 230396046 230396258 -22860325 + MIR SINE MIR 21 262 0 1691 209 133 83 chr2 230396279 230397025 -22859558 + LTR1B LTR ERV1 2 784 -42 233 163 116 93 chr2 230397111 230397197 -22859386 + MIR3 SINE MIR 13 100 -108 2864 110 63 32 chr2 230398658 230399278 -22857305 + LTR8A LTR ERV1 1 727 0 297 261 59 34 chr2 230399698 230399817 -22856766 + L2 LINE L2 3184 3305 -8 483 190 55 35 chr2 230400812 230400980 -22855603 + MLT1H LTR MaLR 21 160 -249 2455 217 82 28 chr2 230401664 230402337 -22854246 + L1ME2 LINE L1 5341 6049 -115 1298 210 76 0 chr2 230402341 230402631 -22853952 - MER58B DNA MER1_type -2 339 28 254 258 16 0 chr2 230402639 230402701 -22853882 + L1ME2 LINE L1 6045 6107 -57 25 31 0 0 chr2 230403067 230403099 -22853484 + AT_rich Low_complexity Low_complexity 1 32 0 429 229 0 0 chr2 230403103 230403186 -22853397 - AluJ/FRAM SINE Alu -16 296 214 1644 182 11 7 chr2 230403212 230403492 -22853091 - AluJo SINE Alu -31 281 1 2137 122 21 0 chr2 230403498 230403786 -22852797 - AluSg SINE Alu -16 294 1 198 303 30 0 chr2 230403928 230403994 -22852589 + L2 LINE L2 3205 3272 0 908 172 104 16 chr2 230404190 230404382 -22852201 - MER3 DNA MER1_type 0 209 1 831 207 116 10 chr2 230404480 230404678 -22851905 + MER58A DNA MER1_type 6 224 0 338 266 41 119 chr2 230404781 230405101 -22851482 - L1ME4a LINE L1 -107 6014 5720 496 299 81 74 chr2 230405526 230406258 -22850325 - HAL1b LINE L1 -531 817 81 2896 77 0 8 chr2 230406397 230406775 -22849808 - THE1C LTR MaLR 0 375 1 2295 131 34 0 chr2 230407610 230407962 -22848621 + THE1B LTR MaLR 1 364 0 204 314 136 0 chr2 230409077 230409195 -22847388 + MIR3 SINE MIR 67 200 -8 1154 274 82 8 chr2 230410299 230410653 -22845930 - MLT1I LTR MaLR 0 409 30 1077 168 56 133 chr2 230410677 230411069 -22845514 + MLT1A1 LTR MaLR 2 363 -2 406 333 79 0 chr2 230411504 230411669 -22844914 - MER91A DNA MER1_type -18 178 1 1078 154 23 6 chr2 230412196 230412371 -22844212 - AluJo SINE Alu -11 301 124 1779 197 106 40 chr2 230412632 230413105 -22843478 + MLT1D LTR MaLR 1 504 -1 522 217 0 0 chr2 230413177 230413260 -22843323 + MER58 DNA MER1_type 1 83 -258 2066 137 0 16 chr2 230413260 230413567 -22843016 + AluJo SINE Alu 1 302 -10 2299 85 3 10 chr2 230413570 230413865 -22842718 + AluSx SINE Alu 1 293 -19 406 211 0 0 chr2 230413865 230413941 -22842642 + MER58 DNA MER1_type 163 238 -2182 273 245 112 10 chr2 230414024 230414122 -22842461 - L1MC5 LINE L1 -181 7780 7673 2329 85 0 7 chr2 230414754 230415049 -22841534 + AluSg SINE Alu 1 293 -17 1233 130 74 96 chr2 230415052 230415234 -22841349 - L1PA16 LINE L1 -16 6150 5974 1772 168 10 7 chr2 230415234 230415531 -22841052 - AluSx SINE Alu -14 298 1 1233 130 74 96 chr2 230415531 230415618 -22840965 - L1PA16 LINE L1 -192 5974 5887 447 19 0 0 chr2 230415751 230415803 -22840780 + (TA)n Simple_repeat Simple_repeat 2 53 0 819 150 0 43 chr2 230415816 230415956 -22840627 - AluJo SINE Alu -178 134 1 1904 241 17 17 chr2 230417011 230417476 -22839107 + LTR40c LTR ERVL 1 465 0 1554 149 0 131 chr2 230417626 230417976 -22838607 - AluJo SINE Alu -8 304 1 252 103 0 0 chr2 230417976 230418015 -22838568 - L1PA16 LINE L1 -193 5973 5935 559 161 11 0 chr2 230418015 230418102 -22838481 - AluJ/FLAM SINE Alu -223 89 2 270 276 55 68 chr2 230418676 230418839 -22837744 + MARNA DNA Mariner 30 190 -396 292 316 70 12 chr2 230418865 230419036 -22837547 - MARNA DNA Mariner -252 334 154 2047 148 30 15 chr2 230419046 230419378 -22837205 + MER1B DNA MER1_type 1 337 0 832 207 173 10 chr2 230419780 230420080 -22836503 + MER113 DNA MER1_type? 1 349 -172 484 263 123 60 chr2 230420142 230420542 -22836041 + MLT1H LTR MaLR 100 524 -25 782 159 0 8 chr2 230420587 230420713 -22835870 - FLAM_A SINE Alu -7 126 2 332 303 25 17 chr2 230420881 230421000 -22835583 - MIR3 SINE MIR -48 160 41 21 0 0 0 chr2 230421157 230421178 -22835405 + AT_rich Low_complexity Low_complexity 1 21 0 1536 219 135 17 chr2 230421194 230421609 -22834974 + MLT1C LTR MaLR 1 464 -3 2646 102 8 6 chr2 230422892 230423255 -22833328 + THE1B LTR MaLR 1 364 0 776 249 106 54 chr2 230423267 230423653 -22832930 + MLT1J LTR MaLR 101 506 -5 377 305 11 2 chr2 230424603 230424743 -22831840 + MIR SINE MIR 21 140 -68 267 239 10 139 chr2 230424743 230424944 -22831639 - MLT1H LTR MaLR -12 578 404 355 207 115 86 chr2 230424947 230425166 -22831417 - MLT1H LTR MaLR -266 143 5 193 320 13 0 chr2 230425182 230425260 -22831323 + MIR SINE MIR 173 251 -11 180 77 0 0 chr2 230425272 230425298 -22831285 + (CTG)n Simple_repeat Simple_repeat 2 27 0 1723 163 3 14 chr2 230425712 230426006 -22830577 - AluJb SINE Alu -21 291 1 309 188 58 0 chr2 230426700 230426769 -22829814 - MIR SINE MIR -98 164 92 289 307 45 68 chr2 230427300 230427476 -22829107 - MIR SINE MIR -20 242 71 374 234 78 37 chr2 230427573 230427726 -22828857 - MIR SINE MIR -53 155 34 656 252 158 27 chr2 230428542 230428707 -22827876 + L2 LINE L2 2624 2766 -547 957 243 37 5 chr2 230428707 230428921 -22827662 - MER58A DNA MER1_type -1 223 3 656 252 158 27 chr2 230428921 230429249 -22827334 + L2 LINE L2 2766 3166 -147 437 282 65 19 chr2 230429262 230429478 -22827105 - L2 LINE L2 -5 3308 3083 470 182 145 31 chr2 230430091 230430250 -22826333 - MIR3 SINE MIR 0 208 32 2257 245 58 21 chr2 230431060 230431669 -22824914 + L1ME3 LINE L1 5416 6046 -116 313 169 0 90 chr2 230432352 230432441 -22824142 - MER117 DNA MER1_type 0 197 117 287 241 222 37 chr2 230432589 230432805 -22823778 - LTR16A1 LTR ERVL -1 456 201 315 201 63 21 chr2 230433639 230433734 -22822849 + MIR3 SINE MIR 97 196 -12 186 133 0 0 chr2 230433898 230433928 -22822655 + (T)n Simple_repeat Simple_repeat 1 30 0 365 291 24 8 chr2 230435329 230435406 -22821177 + MIR3 SINE MIR 74 155 -53 852 203 34 24 chr2 230435406 230435613 -22820970 + MER3 DNA MER1_type 1 209 0 365 291 24 8 chr2 230435613 230435662 -22820921 + MIR3 SINE MIR 155 202 -6 275 336 70 8 chr2 230436119 230436247 -22820336 - L2 LINE L2 -1 3271 3136 348 267 61 23 chr2 230437233 230437364 -22819219 - MIR3 SINE MIR -8 200 65 857 298 152 11 chr2 230437587 230438034 -22818549 + LTR33 LTR ERVL 2 511 -10 338 220 70 10 chr2 230438043 230438143 -22818440 - MIR SINE MIR -79 183 78 556 249 146 26 chr2 230439490 230439696 -22816887 + MIR SINE MIR 2 241 -21 1371 222 98 18 chr2 230439696 230440034 -22816549 - MLT1A1 LTR MaLR 0 365 1 556 249 146 26 chr2 230440034 230440060 -22816523 + MIR SINE MIR 241 262 0 279 0 0 0 chr2 230440528 230440559 -22816024 + (CA)n Simple_repeat Simple_repeat 1 31 0 24 0 0 0 chr2 230443343 230443367 -22813216 + AT_rich Low_complexity Low_complexity 1 24 0 2949 166 29 48 chr2 230443367 230444146 -22812437 + MER21A LTR ERV1 18 931 0 741 199 136 51 chr2 230444277 230444513 -22812070 + MLT1H1 LTR MaLR 290 545 -10 183 156 0 0 chr2 230444525 230444557 -22812026 + (TA)n Simple_repeat Simple_repeat 2 33 0 1139 226 0 0 chr2 230444582 230444777 -22811806 + MER58A DNA MER1_type 9 203 -21 280 281 92 60 chr2 230445074 230445259 -22811324 + MLT1I LTR MaLR 98 288 -121 743 152 18 12 chr2 230445339 230445504 -22811079 + CT-rich Low_complexity Low_complexity 3 168 0 216 281 34 22 chr2 230445651 230445740 -22810843 - MER91B DNA MER1_type -8 182 93 1574 141 176 10 chr2 230445743 230446033 -22810550 - MER44D DNA MER2_type -1 608 1 241 333 22 67 chr2 230446050 230446185 -22810398 - MER91B DNA MER1_type -60 130 2 192 340 235 0 chr2 230446818 230446971 -22809612 + MIR SINE MIR 53 241 -21 283 384 30 8 chr2 230447222 230447355 -22809228 + L2 LINE L2 3132 3267 -5 857 212 35 39 chr2 230447816 230448014 -22808569 - MER73 LTR ERVL 0 644 448 2534 80 3 12 chr2 230448014 230448352 -22808231 + THE1C LTR MaLR 1 335 -40 8632 27 0 1 chr2 230448352 230449350 -22807233 - L1P LINE L1 -1063 5083 4087 7816 31 11 0 chr2 230449350 230450316 -22806267 + L1PA4 LINE L1 5177 6152 -3 467 71 0 0 chr2 230450316 230450372 -22806211 + THE1C LTR MaLR 320 375 0 * 2098 147 37 114 chr2 230450372 230450860 -22805723 - MER73 LTR ERVL -194 450 1 1111 215 23 9 chr2 230450892 230451106 -22805477 - MER58A DNA MER1_type -6 218 2 329 292 50 8 chr2 230451144 230451264 -22805319 + MIR SINE MIR 90 214 -48 2470 172 82 25 chr2 230451480 230452050 -22804533 + Charlie1 DNA MER1_type 2158 2760 -1 573 355 43 0 chr2 230452127 230452406 -22804177 - MER102b DNA MER1_type -50 291 1 195 69 0 0 chr2 230452776 230452805 -22803778 + (A)n Simple_repeat Simple_repeat 1 29 0 474 311 174 16 chr2 230453439 230453629 -22802954 - MIR SINE MIR 0 262 43 590 213 154 15 chr2 230453898 230454227 -22802356 - MER69 DNA AcHobo -56 2470 2017 * 2787 241 61 6 chr2 230454226 230454915 -22801668 - MER69 DNA AcHobo -1719 807 81 23 78 0 0 chr2 230455427 230455478 -22801105 + AT_rich Low_complexity Low_complexity 1 51 0 1837 210 31 24 chr2 230455967 230456460 -22800123 - MLT1D LTR MaLR -3 487 7 2376 99 0 0 chr2 230457015 230457318 -22799265 - AluSx SINE Alu -9 303 1 345 335 59 6 chr2 230457452 230457622 -22798961 - MIR3 SINE MIR -10 198 20 637 303 27 5 chr2 230458068 230458253 -22798330 + MIR SINE MIR 53 241 -21 240 239 80 53 chr2 230458317 230458430 -22798153 + LTR67 LTR ERVL 428 543 -14 326 294 100 16 chr2 230459474 230459658 -22796925 - MIR3 SINE MIR -8 200 1 * 375 235 59 29 chr2 230459658 230459759 -22796824 - MIR SINE MIR -65 143 40 824 291 133 28 chr2 230460330 230460759 -22795824 - L2 LINE L2 0 3313 2840 392 349 8 0 chr2 230461081 230461210 -22795373 + LTR16A LTR ERVL 151 280 -170 3486 297 90 40 chr2 230461340 230464585 -22791998 + HERV16 LTR ERVL 1 3503 -1905 898 321 59 54 chr2 230464605 230465268 -22791315 + ERVL LTR ERVL 4751 5416 -348 1119 289 56 24 chr2 230465380 230465789 -22790794 + LTR16A LTR ERVL 18 439 -11 527 273 81 12 chr2 230467214 230467427 -22789156 + MIR SINE MIR 30 262 0 2515 70 0 0 chr2 230467520 230467822 -22788761 + AluY SINE Alu 1 302 -9 295 265 132 53 chr2 230468417 230468606 -22787977 - MLT1L LTR MaLR -8 607 377 729 273 52 39 chr2 230468659 230468967 -22787616 - MLT1L LTR MaLR -296 319 8 443 266 129 50 chr2 230470940 230471181 -22785402 - MIR SINE MIR 0 262 3 382 333 36 26 chr2 230472809 230473004 -22783579 - MIR3 SINE MIR -9 199 3 639 266 101 14 chr2 230474699 230474996 -22781587 - L1ME4a LINE L1 -75 6046 5724 204 40 0 0 chr2 230475599 230475624 -22780959 + (TG)n Simple_repeat Simple_repeat 1 25 0 299 370 0 37 chr2 230475861 230476023 -22780560 - MER5B DNA MER1_type -17 161 6 1611 208 27 12 chr2 230476032 230476368 -22780215 + MER58B DNA MER1_type 1 341 0 1866 265 90 44 chr2 230476530 230477418 -22779165 + L1MEd LINE L1 2 930 -5189 2134 142 0 0 chr2 230477730 230478086 -22778497 + AluJb SINE Alu 1 356 0 1890 220 8 6 chr2 230478438 230478802 -22777781 + MLT1A1 LTR MaLR 1 365 0 24 53 0 0 chr2 230480004 230480042 -22776541 + AT_rich Low_complexity Low_complexity 1 38 0 628 291 18 6 chr2 230480102 230480267 -22776316 - MIR3 SINE MIR -27 181 15 275 268 119 72 chr2 230480335 230480529 -22776054 - MIR SINE MIR -40 222 20 830 206 88 25 chr2 230481669 230481873 -22774710 - MIR SINE MIR 0 262 46 1722 148 41 0 chr2 230483043 230483313 -22773270 + Tigger5 DNA MER2_type 2043 2323 0 1497 235 50 5 chr2 230484573 230484986 -22771597 - L1MC4 LINE L1 0 8042 7504 491 281 145 45 chr2 230485093 230485403 -22771180 + MLT1J LTR MaLR 69 409 -102 192 40 0 0 chr2 230485447 230485472 -22771111 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 26 50 0 0 chr2 230485544 230485584 -22770999 + AT_rich Low_complexity Low_complexity 1 40 0 1547 155 68 18 chr2 230485584 230485862 -22770721 - AluJo SINE Alu -20 292 1 296 219 31 31 chr2 230485870 230485966 -22770617 + MLT1J LTR MaLR 416 511 0 2997 62 5 0 chr2 230487434 230487805 -22768778 + THE1A-int LTR MaLR 1208 1580 0 2479 95 35 9 chr2 230487805 230488151 -22768432 + THE1A LTR MaLR 1 355 0 288 363 35 0 chr2 230488241 230488354 -22768229 - L2 LINE L2 -4 3309 3193 741 259 35 10 chr2 230488717 230488914 -22767669 - MIR SINE MIR -56 206 5 183 373 60 0 chr2 230489059 230489126 -22767457 - L2 LINE L2 -99 3173 3103 242 181 14 97 chr2 230489560 230489632 -22766951 + L2 LINE L2 3206 3271 -1 434 281 76 18 chr2 230490403 230490574 -22766009 + MIR3 SINE MIR 21 201 -7 474 321 7 29 chr2 230490848 230490985 -22765598 + L2 LINE L2 3139 3272 0 1993 137 3 29 chr2 230491298 230491613 -22764970 - AluSx SINE Alu -5 307 1 237 158 0 123 chr2 230491728 230491785 -22764798 + L2 LINE L2 3261 3310 -3 1020 233 98 41 chr2 230492206 230492663 -22763920 - MLT1F1 LTR MaLR -2 565 1 1323 197 29 0 chr2 230492784 230493023 -22763560 + MLT1A1 LTR MaLR 1 246 -119 586 228 38 28 chr2 230493097 230493264 -22763319 + MLT1A1 LTR MaLR 248 365 0 1059 163 74 11 chr2 230494360 230494550 -22762033 - MER20 DNA MER1_type -2 217 16 375 256 34 62 chr2 230494682 230494858 -22761725 + MARNA DNA Mariner 394 564 -22 703 182 0 15 chr2 230496095 230496227 -22760356 - MLT1C LTR MaLR 0 467 338 26 30 0 0 chr2 230497196 230497229 -22759354 + AT_rich Low_complexity Low_complexity 1 33 0 497 16 16 0 chr2 230497582 230497625 -22758958 + (TA)n Simple_repeat Simple_repeat 1 106 0 497 16 16 0 chr2 230497625 230497687 -22758896 + (TA)n Simple_repeat Simple_repeat 1 63 0 22 35 0 0 chr2 230499460 230499489 -22757094 + AT_rich Low_complexity Low_complexity 1 29 0 1021 241 52 70 chr2 230499577 230500017 -22756566 - MLT1J1 LTR MaLR -14 432 1 202 197 295 0 chr2 230500036 230500097 -22756486 - MIR SINE MIR -111 151 73 1927 161 3 3 chr2 230500193 230500491 -22756092 - AluJb SINE Alu -14 298 1 21 0 0 0 chr2 230501804 230501825 -22754758 + AT_rich Low_complexity Low_complexity 1 21 0 396 239 214 0 chr2 230501896 230502055 -22754528 - MIR SINE MIR 0 262 70 1959 105 6 96 chr2 230502118 230502442 -22754141 + AluSq SINE Alu 3 297 -16 3339 164 32 19 chr2 230502443 230503073 -22753510 - L1MB8 LINE L1 -5 6173 5536 2261 80 0 10 chr2 230503122 230503410 -22753173 - AluY SINE Alu -9 302 18 260 382 26 7 chr2 230504407 230504559 -22752024 + MIR3 SINE MIR 4 158 -50 281 316 17 17 chr2 230504562 230504679 -22751904 - MER5A DNA MER1_type -3 186 70 555 268 36 0 chr2 230504680 230504848 -22751735 - MER5B DNA MER1_type -3 175 2 520 211 31 98 chr2 230505404 230505510 -22751073 - MER113 DNA MER1_type? -108 413 324 2069 97 0 4 chr2 230505510 230505778 -22750805 - AluSx SINE Alu -7 305 39 520 211 31 98 chr2 230505778 230505865 -22750718 - MER113 DNA MER1_type? -197 324 233 254 150 0 17 chr2 230506484 230506544 -22750039 + (CAAAA)n Simple_repeat Simple_repeat 1 59 0 21 0 0 0 chr2 230506580 230506601 -22749982 + AT_rich Low_complexity Low_complexity 1 21 0 438 308 30 18 chr2 230506806 230506975 -22749608 - MER5A DNA MER1_type -2 187 17 1908 100 33 60 chr2 230507220 230507551 -22749032 + THE1C LTR MaLR 1 322 -53 486 165 0 58 chr2 230507736 230507839 -22748744 + L1M3 LINE L1 5482 5578 -593 209 337 45 11 chr2 230510292 230510381 -22746202 - MIR3 SINE MIR -2 206 115 325 281 75 65 chr2 230511100 230511299 -22745284 + MIR SINE MIR 56 256 -6 246 105 53 0 chr2 230561770 230561808 -22694775 - AluSx SINE Alu -261 40 1 960 271 64 15 chr2 230561811 230562154 -22694429 - L2 LINE L2 -526 2788 2429 1604 125 16 19 chr2 230562705 230562961 -22693622 + AluSx SINE Alu 58 312 0 398 241 35 0 chr2 230563007 230563094 -22693489 - L2 LINE L2 0 3313 3224 222 336 15 66 chr2 230564334 230564471 -22692112 - MER5A DNA MER1_type -4 185 56 1197 163 0 111 chr2 230564482 230564575 -22692008 + AluJo SINE Alu 54 156 -156 2276 117 0 0 chr2 230564575 230564884 -22691699 + AluSc SINE Alu 1 309 0 1197 163 0 111 chr2 230564884 230565060 -22691523 + AluJo SINE Alu 156 293 -19 21 0 0 0 chr2 230565558 230565579 -22691004 + AT_rich Low_complexity Low_complexity 1 21 0 234 0 0 0 chr2 230565579 230565605 -22690978 + (TTA)n Simple_repeat Simple_repeat 2 27 0 239 263 0 0 chr2 230565983 230565998 -22690585 - L1MA10 LINE L1 -2 6332 6318 1214 199 69 40 chr2 230565998 230566345 -22690238 - L1ME2 LINE L1 -9 6155 5799 231 261 87 0 chr2 230566349 230566418 -22690165 - MLT1J1 LTR MaLR -128 318 244 285 275 29 61 chr2 230566431 230566605 -22689978 - MLT1J2 LTR MaLR -204 205 38 2261 142 18 64 chr2 230566644 230566721 -22689862 - Tigger2a DNA MER2_type -2277 431 352 2225 92 3 3 chr2 230566721 230567033 -22689550 + AluSx SINE Alu 1 312 0 2261 142 18 64 chr2 230567033 230567405 -22689178 - Tigger2a DNA MER2_type -2356 352 2 587 241 6 48 chr2 230567605 230567771 -22688812 - MIR SINE MIR -73 189 31 501 291 40 6 chr2 230568628 230568803 -22687780 - MIR SINE MIR -2 260 80 293 325 60 17 chr2 230568900 230569017 -22687566 - L2 LINE L2 0 3272 3151 366 340 117 32 chr2 230569100 230569441 -22687142 - L2 LINE L2 -4 3268 2899 234 0 0 0 chr2 230570287 230570313 -22686270 + (A)n Simple_repeat Simple_repeat 1 26 0 207 162 0 0 chr2 230571186 230571223 -22685360 + (TA)n Simple_repeat Simple_repeat 1 37 0 194 368 0 23 chr2 230571431 230571518 -22685065 + MIR SINE MIR 68 152 -110 2334 94 10 3 chr2 230571676 230571985 -22684598 - AluSq SINE Alu -2 311 1 534 233 17 0 chr2 230572422 230572542 -22684041 - FLAM_A SINE Alu -5 137 16 285 151 0 0 chr2 230572766 230572819 -22683764 + (TA)n Simple_repeat Simple_repeat 2 54 0 322 290 83 32 chr2 230573033 230573250 -22683333 - L1MC4a LINE L1 -1871 5937 5710 213 247 20 47 chr2 230573261 230573411 -22683172 + T-rich Low_complexity Low_complexity 1 146 0 879 280 126 33 chr2 230573626 230574330 -22682253 - HAL1b LINE L1 -535 813 44 2691 91 6 3 chr2 230576306 230576669 -22679914 + THE1B LTR MaLR 1 364 0 972 269 21 8 chr2 230576896 230577134 -22679449 - MIR SINE MIR -10 252 12 193 333 43 0 chr2 230577218 230577311 -22679272 - MIR3 SINE MIR -1 207 111 235 315 56 34 chr2 230578454 230578543 -22678040 + L2 LINE L2 3150 3240 -32 204 195 0 0 chr2 230578689 230578730 -22677853 - L2 LINE L2 -2 3311 3271 217 289 67 11 chr2 230578780 230578870 -22677713 - MIR SINE MIR -77 131 37 191 278 56 0 chr2 230579319 230579373 -22677210 + L2 LINE L2 3216 3272 0 1648 210 42 21 chr2 230579587 230580020 -22676563 + Charlie1b DNA MER1_type 1 442 -81 956 146 4 55 chr2 230580141 230580388 -22676195 - MER4A LTR ERV1 -125 539 247 282 264 0 100 chr2 230580605 230580745 -22675838 - MER4A LTR ERV1 -167 497 372 771 122 70 52 chr2 230580814 230580986 -22675597 - MER4A LTR ERV1 -489 175 1 344 343 84 42 chr2 230580991 230581370 -22675213 - L2 LINE L2 -472 2842 2448 761 280 58 0 chr2 230581451 230581658 -22674925 + MIR SINE MIR 38 256 -6 2133 132 10 0 chr2 230581874 230582177 -22674406 + AluSx SINE Alu 1 306 -6 412 264 8 8 chr2 230583206 230583335 -22673248 + L1MC5 LINE L1 7314 7442 -519 225 65 0 0 chr2 230583364 230583395 -22673188 + (TAA)n Simple_repeat Simple_repeat 1 31 0 1777 119 4 47 chr2 230583427 230583704 -22672879 - AluSx SINE Alu -11 301 37 284 293 52 37 chr2 230583756 230583947 -22672636 + L1MC4 LINE L1 7711 7904 -138 340 281 27 112 chr2 230584095 230584355 -22672228 - L2 LINE L2 0 3313 3076 1706 212 53 2 chr2 230584710 230585106 -22671477 + MLT2C2 LTR ERVL 1 416 -48 292 324 18 13 chr2 230585212 230585349 -22671234 - MIR SINE MIR -63 145 37 1992 81 0 19 chr2 230586319 230586578 -22670005 - AluY SINE Alu -18 293 40 243 378 31 5 chr2 230586635 230586828 -22669755 - MIR SINE MIR -2 260 63 259 378 0 22 chr2 230588069 230588204 -22668379 + MIR SINE MIR 16 147 -61 689 243 53 44 chr2 230590361 230590567 -22666016 - MER63A DNA MER1_type -1 209 2 1855 130 59 24 chr2 230591535 230591873 -22664710 - LTR45B LTR ERV1 -131 358 9 27 29 0 0 chr2 230592212 230592246 -22664337 + AT_rich Low_complexity Low_complexity 1 34 0 231 217 61 104 chr2 230593370 230593485 -22663098 - MER94 DNA DNA -2 132 23 405 148 284 12 chr2 230593688 230593857 -22662726 + L1M4 LINE L1 5008 5222 -924 207 318 114 51 chr2 230594103 230594279 -22662304 - MIR SINE MIR -73 189 3 2103 140 3 0 chr2 230594302 230594602 -22661981 + AluSx SINE Alu 1 301 -11 24 32 0 0 chr2 230595374 230595405 -22661178 + AT_rich Low_complexity Low_complexity 1 31 0 221 185 0 19 chr2 230595764 230595818 -22660765 + A-rich Low_complexity Low_complexity 6 58 0 339 281 22 15 chr2 230595820 230595955 -22660628 + MER103 DNA DNA 1 136 -30 2292 101 0 0 chr2 230596305 230596601 -22659982 + AluSx SINE Alu 1 296 -16 839 264 132 12 chr2 230596904 230597245 -22659338 + MLT1J2 LTR MaLR 25 406 -44 643 229 128 4 chr2 230598160 230598409 -22658174 - MER69 DNA AcHobo 0 2526 2247 590 165 250 0 chr2 230598673 230598861 -22657722 - MER69 DNA AcHobo -271 2255 2021 941 231 82 30 chr2 230598880 230599183 -22657400 - MER69 DNA AcHobo -668 558 240 1220 202 109 4 chr2 230600442 230600559 -22656024 + AluJo SINE Alu 1 104 -208 405 0 0 0 chr2 230600559 230600604 -22655979 + (CA)n Simple_repeat Simple_repeat 2 46 0 1220 202 109 4 chr2 230600604 230600733 -22655850 + AluJo SINE Alu 104 273 -39 234 284 21 21 chr2 230600848 230600943 -22655640 - MLT1F LTR MaLR -447 95 1 255 114 0 0 chr2 230601112 230601156 -22655427 + (TG)n Simple_repeat Simple_repeat 2 45 0 735 195 40 0 chr2 230601192 230601341 -22655242 - Tigger2 DNA MER2_type 0 2718 2564 * 912 162 99 5 chr2 230601340 230601531 -22655052 - Tigger2 DNA MER2_type -2508 210 2 249 200 0 0 chr2 230601668 230601718 -22654865 + MIR SINE MIR 93 142 -120 22 0 0 0 chr2 230601953 230601975 -22654608 + AT_rich Low_complexity Low_complexity 1 22 0 547 273 42 55 chr2 230602250 230602283 -22654300 + L2 LINE L2 3077 3109 -204 1248 252 76 6 chr2 230602283 230602624 -22653959 + MLT1A1 LTR MaLR 1 365 0 547 273 42 55 chr2 230602624 230602828 -22653755 + L2 LINE L2 3109 3311 -2 2234 121 0 0 chr2 230602975 230603281 -22653302 - AluSg SINE Alu -4 306 1 245 287 128 0 chr2 230603492 230603586 -22652997 + MIR SINE MIR 157 262 0 294 350 0 29 chr2 230604022 230604051 -22652532 - MIR SINE MIR -65 143 115 2282 96 3 10 chr2 230604051 230604363 -22652220 + AluSx SINE Alu 1 310 -2 294 350 0 29 chr2 230604363 230604436 -22652147 - MIR SINE MIR -93 115 44 302 287 128 0 chr2 230604766 230604860 -22651723 - L1ME LINE L1 -469 5652 5547 344 252 114 41 chr2 230604935 230605161 -22651422 - L1ME LINE L1 -734 5430 5191 234 167 44 22 chr2 230605208 230605298 -22651285 + (TA)n Simple_repeat Simple_repeat 1 92 0 193 107 87 27 chr2 230605299 230605448 -22651135 + (TTATA)n Simple_repeat Simple_repeat 4 161 0 * 333 159 12 25 chr2 230605424 230605587 -22650996 + (TA)n Simple_repeat Simple_repeat 1 161 0 585 179 42 11 chr2 230605607 230605960 -22650623 + (TA)n Simple_repeat Simple_repeat 1 363 0 36 87 0 0 chr2 230605962 230606054 -22650529 + AT_rich Low_complexity Low_complexity 1 92 0 1849 150 0 4 chr2 230606415 230606689 -22649894 + AluSx SINE Alu 1 273 -39 433 133 0 53 chr2 230606689 230606802 -22649781 + (GAAA)n Simple_repeat Simple_repeat 1 107 0 445 264 28 49 chr2 230606951 230607095 -22649488 + MIR SINE MIR 65 205 -57 510 301 116 43 chr2 230607374 230607910 -22648673 - L2 LINE L2 -90 3223 2599 1623 110 151 39 chr2 230608187 230608354 -22648229 + THE1C LTR MaLR 1 148 -227 393 39 0 0 chr2 230608354 230608405 -22648178 + (TC)n Simple_repeat Simple_repeat 1 51 0 1623 110 151 39 chr2 230608405 230608574 -22648009 + THE1C LTR MaLR 148 375 0 1511 186 43 65 chr2 230608580 230608879 -22647704 - MLT1B LTR MaLR -1 389 85 2092 89 45 17 chr2 230608879 230609170 -22647413 - AluSq SINE Alu -14 299 1 2120 126 0 0 chr2 230609170 230609471 -22647112 - AluY SINE Alu -10 301 1 2138 125 7 0 chr2 230609471 230609775 -22646808 - AluSx SINE Alu -6 306 1 1511 186 43 65 chr2 230609775 230609871 -22646712 - MLT1B LTR MaLR -302 88 1 240 239 239 23 chr2 230610928 230611016 -22645567 + MIR SINE MIR 43 149 -113 709 244 25 20 chr2 230611497 230611698 -22644885 + MIR SINE MIR 61 262 0 1907 180 68 3 chr2 230612518 230612885 -22643698 - MSTD LTR MaLR 0 396 6 1271 134 43 22 chr2 230613176 230613407 -22643176 - MER46A DNA MER2_type 0 236 1 28 0 0 0 chr2 230614639 230614667 -22641916 + AT_rich Low_complexity Low_complexity 1 28 0 1522 108 28 5 chr2 230614667 230614905 -22641678 + AluSg/x SINE Alu 66 308 0 242 225 42 0 chr2 230615471 230615542 -22641041 + (TA)n Simple_repeat Simple_repeat 1 74 0 202 222 0 0 chr2 230616124 230616169 -22640414 - L2 LINE L2 -8 3305 3261 2234 137 3 18 chr2 230616766 230617108 -22639475 - MER1B DNA MER1_type 0 337 1 316 404 6 12 chr2 230617135 230617301 -22639282 - MIR3 SINE MIR -13 195 31 967 264 89 9 chr2 230617444 230617770 -22638813 + MLT1H LTR MaLR 1 352 -197 1585 205 19 24 chr2 230618273 230618649 -22637934 + MLT1A2 LTR MaLR 1 374 0 594 273 72 19 chr2 230619303 230619512 -22637071 - MER58A DNA MER1_type -4 220 1 231 342 0 0 chr2 230619519 230619598 -22636985 + MIR SINE MIR 181 259 -3 740 171 8 0 chr2 230620920 230621037 -22635546 + AluJb SINE Alu 1 118 -194 584 220 75 28 chr2 230621491 230621570 -22635013 + L1ME3A LINE L1 2218 2292 -3854 1889 124 86 122 chr2 230621570 230621941 -22634642 + MSTB LTR MaLR 1 355 -71 2048 129 36 3 chr2 230621941 230622243 -22634340 - AluSx SINE Alu 0 312 1 1889 124 86 122 chr2 230622243 230622313 -22634270 + MSTB LTR MaLR 355 426 0 584 220 75 28 chr2 230622313 230622447 -22634136 + L1ME3A LINE L1 2292 2441 -3705 597 272 5 0 chr2 230622459 230622650 -22633933 + L1PB1 LINE L1 6 197 -6666 * 8478 163 29 4 chr2 230622647 230625881 -22630702 + L1PB1 LINE L1 1392 4705 -2157 2412 133 10 0 chr2 230625882 230626267 -22630316 + L1PB1 LINE L1 6479 6867 0 356 248 9 0 chr2 230626270 230626383 -22630200 + L1ME3A LINE L1 2428 2541 -3605 4879 268 66 21 chr2 230626657 230627764 -22628819 + L1ME3A LINE L1 2636 3692 -2454 369 0 0 0 chr2 230627764 230627805 -22628778 + (TA)n Simple_repeat Simple_repeat 2 42 0 4879 268 66 21 chr2 230627805 230629214 -22627369 + L1ME3A LINE L1 3692 5265 -881 788 253 15 15 chr2 230629240 230629442 -22627141 - MLT1A2 LTR MaLR 0 374 173 560 168 24 18 chr2 230629455 230629622 -22626961 + GA-rich Low_complexity Low_complexity 2 169 0 2188 65 0 7 chr2 230630404 230630681 -22625902 + AluY SINE Alu 37 311 0 24 0 0 0 chr2 230631245 230631269 -22625314 + AT_rich Low_complexity Low_complexity 1 24 0 315 292 54 54 chr2 230631293 230631478 -22625105 - MIR SINE MIR -12 250 66 342 200 200 0 chr2 230632741 230632846 -22623737 + L2 LINE L2 3188 3313 0 475 349 19 5 chr2 230632909 230633118 -22623465 + MIR SINE MIR 51 262 0 389 352 0 0 chr2 230633184 230633312 -22623271 + MIR3 SINE MIR 45 172 -36 468 279 18 102 chr2 230633338 230633671 -22622912 - MER102a DNA MER1_type -2 328 24 284 303 18 28 chr2 230635068 230635177 -22621406 + MIR SINE MIR 37 144 -118 300 303 22 0 chr2 230636057 230636146 -22620437 - MIR SINE MIR -80 128 38 318 221 142 18 chr2 230636715 230636828 -22619755 - L1ME4a LINE L1 -33 6088 5962 405 266 130 13 chr2 230637333 230637487 -22619096 - MIR SINE MIR -12 250 79 1157 202 105 30 chr2 230637491 230637823 -22618760 + MLT1D LTR MaLR 3 359 -146 322 353 42 50 chr2 230638904 230639243 -22617340 + L1ME3A LINE L1 5524 5866 -304 1997 138 23 52 chr2 230639292 230639639 -22616944 - MER1B DNA MER1_type 0 337 1 584 246 14 7 chr2 230639749 230639887 -22616696 + MIR SINE MIR 102 240 -22 416 239 284 0 chr2 230640795 230640929 -22615654 - MER5B DNA MER1_type -6 172 1 198 103 0 0 chr2 230641324 230641353 -22615230 + (TATATG)n Simple_repeat Simple_repeat 2 30 0 420 143 0 0 chr2 230641360 230641430 -22615153 + (CA)n Simple_repeat Simple_repeat 2 71 0 183 302 107 47 chr2 230642496 230642645 -22613938 - L3 LINE CR1 -7 1570 1413 1846 210 36 86 chr2 230642852 230643218 -22613365 + MER90 LTR ERV1 1 327 -248 2281 110 0 0 chr2 230643218 230643526 -22613057 - AluSc SINE Alu -1 308 1 1846 210 36 86 chr2 230643526 230643764 -22612819 + MER90 LTR ERV1 327 575 0 353 310 65 32 chr2 230643900 230644055 -22612528 - MIR3 SINE MIR -44 164 5 28 0 0 0 chr2 230644381 230644409 -22612174 + AT_rich Low_complexity Low_complexity 1 28 0 452 283 124 80 chr2 230644838 230645315 -22611268 - L1ME4a LINE L1 -214 5907 5410 21 36 0 0 chr2 230645751 230645779 -22610804 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr2 230646853 230646876 -22609707 + AT_rich Low_complexity Low_complexity 1 23 0 218 259 0 19 chr2 230647122 230647176 -22609407 + (CA)n Simple_repeat Simple_repeat 2 54 0 410 260 29 0 chr2 230647404 230647508 -22609075 - MIR SINE MIR -3 259 153 1572 133 133 58 chr2 230647899 230648229 -22608354 - MSTA LTR MaLR 0 428 74 345 171 43 0 chr2 230648330 230648400 -22608183 + AluJ/FRAM SINE Alu 221 293 -9 231 179 0 0 chr2 230648427 230648494 -22608089 + (CA)n Simple_repeat Simple_repeat 1 67 0 2053 142 0 16 chr2 230648882 230649200 -22607383 + AluSq SINE Alu 1 313 0 613 188 118 32 chr2 230649213 230649399 -22607184 - MER69 DNA AcHobo -2324 202 1 284 296 56 19 chr2 230649890 230649998 -22606585 + L2 LINE L2 3202 3313 0 379 244 0 0 chr2 230650126 230650216 -22606367 - L1ME LINE L1 -474 5647 5558 595 243 59 72 chr2 230650216 230650438 -22606145 - L2 LINE L2 -3 3310 3092 852 276 80 11 chr2 230650520 230650806 -22605777 + ERVL LTR ERVL 1948 2253 -3511 1609 327 88 15 chr2 230650833 230651579 -22605004 + ERVL LTR ERVL 4580 5380 -384 649 242 142 0 chr2 230651594 230651876 -22604707 + LTR50 LTR ERVL 389 795 0 940 36 0 0 chr2 230652021 230652160 -22604423 + AluY SINE Alu 175 313 0 858 159 12 25 chr2 230652161 230652324 -22604259 - L1MD2 LINE L1 -8 6351 6191 243 0 0 0 chr2 230652531 230652558 -22604025 + (GA)n Simple_repeat Simple_repeat 1 27 0 339 306 37 58 chr2 230652590 230652832 -22603751 - L2 LINE L2 -247 3066 2830 528 336 36 5 chr2 230652896 230653119 -22603464 - L3 LINE CR1 -148 1429 1200 247 259 0 0 chr2 230653457 230653511 -22603072 - MER5A DNA MER1_type -8 181 128 249 219 100 138 chr2 230654987 230655026 -22601557 + MLT1L LTR MaLR 427 466 -149 2027 141 0 0 chr2 230655026 230655337 -22601246 - AluSx SINE Alu 0 311 1 249 219 100 138 chr2 230655337 230655456 -22601127 + MLT1L LTR MaLR 466 580 -35 1118 224 32 12 chr2 230655460 230655710 -22600873 + MIR SINE MIR 8 262 0 206 230 27 0 chr2 230655857 230655931 -22600652 + CT-rich Low_complexity Low_complexity 2 77 0 25 51 0 0 chr2 230657645 230657684 -22598899 + AT_rich Low_complexity Low_complexity 1 39 0 298 320 31 0 chr2 230657716 230657813 -22598770 - MIR SINE MIR -106 156 57 23051 147 14 14 chr2 230657974 230661170 -22595413 - L1MA3 LINE L1 0 7724 4528 2513 61 0 0 chr2 230661170 230661465 -22595118 + AluY SINE Alu 1 295 -16 23051 147 14 14 chr2 230661465 230665788 -22590795 - L1MA3 LINE L1 -3196 4528 14 575 303 62 19 chr2 230666131 230666342 -22590241 + MIR SINE MIR 11 230 -32 504 0 0 0 chr2 230667896 230667952 -22588631 + (TTCC)n Simple_repeat Simple_repeat 2 57 0 229 314 22 7 chr2 230668097 230668234 -22588349 + L1ME4a LINE L1 5728 5866 -255 2290 104 3 0 chr2 230668322 230668630 -22587953 + AluSx SINE Alu 1 309 -3 519 292 115 18 chr2 230668636 230668862 -22587721 - MIR SINE MIR -8 254 7 288 196 34 108 chr2 230669067 230669215 -22587368 + L1ME4a LINE L1 5981 6117 -4 21 0 0 0 chr2 230670051 230670072 -22586511 + AT_rich Low_complexity Low_complexity 1 21 0 250 365 34 53 chr2 230670315 230670523 -22586060 - L3 LINE CR1 -829 748 545 561 248 142 13 chr2 230671581 230671807 -22584776 + L1ME LINE L1 5505 5759 -362 21 0 0 0 chr2 230672071 230672092 -22584491 + AT_rich Low_complexity Low_complexity 1 21 0 625 258 32 21 chr2 230672538 230672724 -22583859 - MIR SINE MIR -10 252 65 250 309 44 7 chr2 230672739 230672875 -22583708 + L1ME LINE L1 5691 5831 -290 838 177 30 109 chr2 230672905 230673171 -22583412 - L1MB8 LINE L1 -6 6172 5928 779 199 26 0 chr2 230673177 230673333 -22583250 - L1MA6 LINE L1 -239 6061 5902 1691 138 205 11 chr2 230675848 230676204 -22580379 - MSTA LTR MaLR -3 425 1 545 232 72 7 chr2 230676504 230676642 -22579941 + MIR SINE MIR 113 259 -3 210 407 0 0 chr2 230676947 230677038 -22579545 + MIR SINE MIR 41 131 -77 381 366 6 6 chr2 230677852 230678013 -22578570 + MIR3 SINE MIR 39 199 -9 1857 121 49 80 chr2 230680364 230680751 -22575832 + THE1C LTR MaLR 1 375 0 294 290 56 19 chr2 230681055 230681162 -22575421 + MIR SINE MIR 36 146 -62 319 322 56 28 chr2 230681253 230681396 -22575187 - MIR3 SINE MIR -48 160 14 264 336 73 9 chr2 230681587 230681697 -22574886 + L2 LINE L2 3154 3270 -2 293 308 0 66 chr2 230681929 230682020 -22574563 + MIR SINE MIR 15 99 -163 22 35 0 0 chr2 230682692 230682721 -22573862 + AT_rich Low_complexity Low_complexity 1 29 0 1330 193 0 36 chr2 230683030 230683357 -22573226 - AluJo SINE Alu 0 374 57 598 253 37 6 chr2 230683859 230684021 -22572562 + MIR SINE MIR 90 256 -6 198 300 20 0 chr2 230684201 230684251 -22572332 + L2 LINE L2 3136 3186 -86 29 28 0 0 chr2 230684283 230684319 -22572264 + AT_rich Low_complexity Low_complexity 1 36 0 199 300 43 14 chr2 230686919 230686989 -22569594 - MIR SINE MIR -109 153 82 1075 133 0 0 chr2 230687076 230687251 -22569332 - AluSg/x SINE Alu 0 307 133 861 100 75 0 chr2 230687251 230687371 -22569212 + AluSg1 SINE Alu 16 144 -165 9803 45 0 2 chr2 230689062 230690271 -22566312 - L1PA5 LINE L1 -971 5175 3969 7271 50 0 1 chr2 230690271 230691250 -22565333 + L1PA5 LINE L1 5177 6154 0 459 70 113 14 chr2 230691335 230691406 -22565177 - MADE1 DNA Mariner -1 79 2 520 259 59 55 chr2 230691672 230692144 -22564439 + L1M4 LINE L1 2762 3235 -2911 1301 303 109 24 chr2 230692319 230693497 -22563086 + L1M4 LINE L1 3422 4768 -1378 4254 110 45 3 chr2 230693497 230694144 -22562439 + L1PA16 LINE L1 5480 6153 -13 1301 303 109 24 chr2 230694144 230694535 -22562048 + L1M4 LINE L1 4768 5124 -1022 349 294 59 0 chr2 230696171 230696290 -22560293 + LTR16A1 LTR ERVL 328 453 -4 318 292 0 0 chr2 230697177 230697224 -22559359 + MER3 DNA MER1_type 2 48 -161 483 210 8 48 chr2 230697224 230697348 -22559235 - MER3 DNA MER1_type -1 208 90 214 279 117 99 chr2 230697409 230697520 -22559063 - MIR SINE MIR -71 137 25 3002 147 19 8 chr2 230697744 230698608 -22557975 + L1MA7 LINE L1 4811 5682 -609 992 157 97 0 chr2 230698604 230698821 -22557762 + L1MA7 LINE L1 6054 6291 0 * 294 250 24 12 chr2 230698939 230699023 -22557560 - LTR33 LTR ERVL 0 521 437 188 330 55 28 chr2 230699237 230699346 -22557237 - L2 LINE L2 -2 3311 3200 522 291 159 36 chr2 230699571 230699791 -22556792 + L2 LINE L2 2281 2527 -787 849 193 79 16 chr2 230699797 230700109 -22556474 - MSTD LTR MaLR -11 385 1 530 236 16 0 chr2 230700110 230700233 -22556350 + L2 LINE L2 2525 2649 -665 235 141 62 16 chr2 230700341 230700405 -22556178 + T-rich Low_complexity Low_complexity 3 69 0 191 247 186 21 chr2 230700523 230700620 -22555963 - MIR SINE MIR -37 225 113 185 400 92 0 chr2 230700783 230700913 -22555670 - L2 LINE L2 -4 3268 3127 250 200 17 17 chr2 230702202 230702262 -22554321 + MLT1J2 LTR MaLR 67 126 -324 364 244 205 11 chr2 230705468 230705620 -22550963 + MER5A DNA MER1_type 4 189 0 288 247 11 0 chr2 230705711 230705800 -22550783 + L1ME3A LINE L1 5711 5800 -321 351 211 133 0 chr2 230706728 230706818 -22549765 - MER5B DNA MER1_type 0 178 77 2142 112 31 0 chr2 230708098 230708392 -22548191 + AluSc SINE Alu 1 303 -6 22 35 0 0 chr2 230708476 230708505 -22548078 + AT_rich Low_complexity Low_complexity 1 29 0 8291 145 36 14 chr2 230708511 230709240 -22547343 - L1MA2 LINE L1 0 6304 5592 2087 119 7 10 chr2 230709240 230709542 -22547041 - AluSq SINE Alu -12 301 1 8291 145 36 14 chr2 230709542 230711541 -22545042 - L1MA2 LINE L1 -712 5592 3512 304 338 30 8 chr2 230711834 230711967 -22544616 + MIR SINE MIR 116 251 -11 279 0 0 0 chr2 230711987 230712018 -22544565 + (CAT)n Simple_repeat Simple_repeat 3 33 0 1558 131 128 45 chr2 230712648 230712985 -22543598 - MLT1A1 LTR MaLR 0 365 1 304 369 0 0 chr2 230713160 230713263 -22543320 + MIR3 SINE MIR 73 175 -33 214 172 16 31 chr2 230714177 230714241 -22542342 + (CA)n Simple_repeat Simple_repeat 2 64 0 1899 148 35 59 chr2 230714755 230715127 -22541456 + THE1B LTR MaLR 2 364 0 261 259 51 32 chr2 230716072 230716230 -22540353 + L1ME3A LINE L1 5767 5927 -243 13815 131 27 21 chr2 230716281 230718685 -22537898 - Tigger1 DNA MER2_type 0 2418 1 276 167 36 24 chr2 230718863 230718947 -22537636 + (TA)n Simple_repeat Simple_repeat 1 85 0 364 253 22 11 chr2 230718950 230719041 -22537542 + MER8 DNA MER2_type 15 106 -133 1881 184 41 94 chr2 230719445 230719826 -22536757 + MLT1D LTR MaLR 1 348 -157 2088 119 7 0 chr2 230719826 230720009 -22536574 - AluSx SINE Alu 0 312 125 192 40 0 0 chr2 230720009 230720034 -22536549 + (TTG)n Simple_repeat Simple_repeat 3 27 0 2088 119 7 0 chr2 230720034 230720143 -22536440 - AluSx SINE Alu -187 125 18 1881 184 41 94 chr2 230720143 230720294 -22536289 + MLT1D LTR MaLR 348 505 0 22 0 0 0 chr2 230720320 230720342 -22536241 + AT_rich Low_complexity Low_complexity 1 22 0 322 350 125 29 chr2 230720427 230720810 -22535773 - L2 LINE L2 -575 2739 2320 764 293 30 17 chr2 230722093 230722390 -22534193 + LTR16A1 LTR ERVL 134 434 -23 583 313 23 32 chr2 230722473 230722690 -22533893 - MIR SINE MIR 0 262 48 214 289 18 105 chr2 230723345 230723459 -22533124 + MIR SINE MIR 38 141 -67 948 244 30 20 chr2 230723649 230723948 -22532635 - L1ME3A LINE L1 -35 6135 5834 1649 212 61 22 chr2 230724116 230724274 -22532309 + MSTB LTR MaLR 1 151 -275 2714 26 0 0 chr2 230724274 230724580 -22532003 - AluY SINE Alu -5 306 1 1649 212 61 22 chr2 230724580 230724831 -22531752 + MSTB LTR MaLR 151 426 0 7991 198 23 15 chr2 230724831 230726455 -22530128 + MSTB-int LTR MaLR 1 1637 -14 1742 181 31 72 chr2 230726461 230726661 -22529922 + MSTB LTR MaLR 1 147 -249 1898 153 11 0 chr2 230726661 230726978 -22529605 + AluSx SINE Alu 1 320 0 1742 181 31 72 chr2 230726978 230727219 -22529364 + MSTB LTR MaLR 147 396 0 409 239 0 18 chr2 230727225 230727388 -22529195 - L1MEc LINE L1 -2878 4687 4528 3043 150 2 10 chr2 230727388 230727907 -22528676 - L1PA15 LINE L1 -5 6160 5646 803 156 14 0 chr2 230727907 230728048 -22528535 - THE1C LTR MaLR 0 375 233 920 186 47 19 chr2 230728180 230728395 -22528188 - THE1C LTR MaLR -154 221 1 9228 134 42 14 chr2 230728395 230729933 -22526650 - THE1C-int LTR MaLR 0 1580 1 2009 163 36 6 chr2 230729933 230730295 -22526288 - THE1C LTR MaLR 0 375 3 249 108 0 0 chr2 230730317 230730354 -22526229 + (TA)n Simple_repeat Simple_repeat 1 37 0 1392 109 22 52 chr2 230730354 230730584 -22525999 - AluSp SINE Alu -6 307 85 13323 199 19 12 chr2 230730584 230730709 -22525874 - L1PA15 LINE L1 -543 5622 5499 228 35 0 0 chr2 230730709 230730738 -22525845 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 13323 199 19 12 chr2 230730738 230734070 -22522513 - L1PA15 LINE L1 -666 5499 2144 233 191 0 0 chr2 230734399 230734446 -22522137 + MER113 DNA MER1_type? 2 48 -473 426 267 150 46 chr2 230734483 230734876 -22521707 + MER113 DNA MER1_type? 45 478 -43 222 62 0 0 chr2 230737053 230737085 -22519498 + (TC)n Simple_repeat Simple_repeat 2 33 0 27155 79 8 3 chr2 230738138 230741956 -22514627 - L1P LINE L1 -2311 3835 1 4091 194 7 4 chr2 230741958 230742992 -22513591 - L1MEc LINE L1 -3060 4505 3467 316 162 0 27 chr2 230743918 230743992 -22512591 + CT-rich Low_complexity Low_complexity 2 73 0 240 91 0 0 chr2 230743995 230744028 -22512555 + (TTCTCC)n Simple_repeat Simple_repeat 4 36 0 3379 254 72 22 chr2 230744091 230745322 -22511261 - L1MEc LINE L1 -5073 2673 1381 294 241 84 24 chr2 230746753 230746836 -22509747 - L2 LINE L2 -38 3275 3188 679 309 171 27 chr2 230748531 230748763 -22507820 + HERV16 LTR ERVL 1659 1856 -3140 2150 122 48 20 chr2 230748763 230749117 -22507466 + THE1B LTR MaLR 1 364 0 679 309 171 27 chr2 230749117 230749334 -22507249 + HERV16 LTR ERVL 1856 2173 -2823 388 231 46 50 chr2 230749333 230749483 -22507100 + HERV16 LTR ERVL 3030 3177 -2308 * 836 313 75 54 chr2 230749565 230750414 -22506169 + HERV16 LTR ERVL 4261 5174 -590 1134 200 94 22 chr2 230750414 230750639 -22505944 + MER2 DNA MER2_type 1 257 -87 2165 111 10 7 chr2 230750639 230750936 -22505647 - AluY SINE Alu -13 298 1 1134 200 94 22 chr2 230750936 230751030 -22505553 + MER2 DNA MER2_type 257 343 -1 836 313 75 54 chr2 230751030 230751184 -22505399 + HERV16 LTR ERVL 5174 5323 -441 1127 264 76 20 chr2 230751386 230751783 -22504800 + LTR16A LTR ERVL 26 444 -6 2071 127 3 10 chr2 230753545 230753859 -22502724 - AluSx SINE Alu 0 312 1 280 189 11 11 chr2 230754566 230754661 -22501922 + GA-rich Low_complexity Low_complexity 1 95 0 287 48 0 24 chr2 230755491 230755533 -22501050 + (CAA)n Simple_repeat Simple_repeat 2 42 0 688 220 35 12 chr2 230756933 230757106 -22499477 - MER69A DNA AcHobo 0 177 1 277 299 140 28 chr2 230757433 230757603 -22498980 - MIR SINE MIR -62 146 1 678 127 25 0 chr2 230758125 230758243 -22498340 + L1MA4 LINE L1 6139 6259 -41 590 75 21 0 chr2 230758346 230758440 -22498143 + L1MA4 LINE L1 6204 6299 -1 706 306 55 8 chr2 230760377 230760612 -22495971 + MIR SINE MIR 6 251 -11 522 308 104 9 chr2 230761599 230761820 -22494763 + MIR SINE MIR 21 262 0 1192 217 106 37 chr2 230762667 230763017 -22493566 - MLT1A2 LTR MaLR 0 374 1 302 271 76 8 chr2 230763838 230763956 -22492627 + MIR3 SINE MIR 83 208 0 2243 106 42 31 chr2 230764512 230764872 -22491711 + THE1B LTR MaLR 1 364 0 295 300 150 0 chr2 230764928 230765088 -22491495 + MIR SINE MIR 78 261 -1 207 0 0 0 chr2 230765552 230765575 -22491008 + (TG)n Simple_repeat Simple_repeat 2 24 0 21 36 0 0 chr2 230767089 230767117 -22489466 + AT_rich Low_complexity Low_complexity 1 28 0 491 193 124 41 chr2 230767987 230768132 -22488451 + MER58A DNA MER1_type 1 157 0 426 121 0 0 chr2 230768596 230768662 -22487921 + (TTCC)n Simple_repeat Simple_repeat 4 69 0 1801 140 41 0 chr2 230768671 230768942 -22487641 - AluSg SINE Alu -7 303 22 326 294 137 59 chr2 230769194 230769551 -22487032 + L1M4 LINE L1 4256 4640 -1506 456 303 15 0 chr2 230771656 230771788 -22484795 - MIR SINE MIR -121 141 8 397 298 85 27 chr2 230771796 230771984 -22484599 + L2 LINE L2 3074 3272 0 381 216 301 0 chr2 230774730 230774883 -22481700 + MER69 DNA AcHobo 1 199 -2327 328 301 221 0 chr2 230775017 230775153 -22481430 + MER5A DNA MER1_type 9 174 -15 190 403 24 57 chr2 230775772 230775896 -22480687 + L2 LINE L2 3134 3253 -19 212 250 273 0 chr2 230776307 230776395 -22480188 + MIR SINE MIR 41 152 -110 1836 230 99 34 chr2 230776743 230777300 -22479283 + MLT1E LTR MaLR 1 593 0 3053 186 152 36 chr2 230777541 230778617 -22477966 - L1MC2 LINE L1 -1 6343 5144 312 315 96 70 chr2 230779279 230779454 -22477129 + L2 LINE L2 2926 3114 -158 1964 126 45 25 chr2 230779454 230779811 -22476772 + THE1B LTR MaLR 1 364 0 312 315 96 70 chr2 230779811 230779949 -22476634 + L2 LINE L2 3114 3247 -25 266 305 24 0 chr2 230781119 230781201 -22475382 - L2 LINE L2 -1 3312 3229 23 0 0 0 chr2 230781310 230781333 -22475250 + AT_rich Low_complexity Low_complexity 1 23 0 6100 127 37 17 chr2 230781333 230782269 -22474314 - L1MA3 LINE L1 0 6305 5323 2009 93 28 0 chr2 230782269 230782559 -22474024 - AluY SINE Alu -13 298 1 6100 127 37 17 chr2 230782559 230783061 -22473522 - L1MA3 LINE L1 -982 5323 4832 761 292 68 53 chr2 230783692 230784443 -22472140 - HAL1 LINE L1 0 2507 1746 279 0 0 0 chr2 230784580 230784611 -22471972 + (TG)n Simple_repeat Simple_repeat 2 32 0 306 205 39 0 chr2 230784617 230784695 -22471888 - L1ME1 LINE L1 -51 6115 6035 1137 234 166 34 chr2 230785454 230786129 -22470454 - HAL1 LINE L1 -758 1749 986 1065 276 90 37 chr2 230786130 230786718 -22469865 - HAL1 LINE L1 -1888 619 1 593 148 190 7 chr2 230786965 230787107 -22469476 - MER20 DNA MER1_type -18 201 34 843 205 42 51 chr2 230787148 230787363 -22469220 - MER58A DNA MER1_type -11 213 1 211 367 11 33 chr2 230787615 230787705 -22468878 + L2 LINE L2 3138 3225 -47 5759 137 20 25 chr2 230788123 230789191 -22467392 - L1MC1 LINE L1 -18 6315 5254 31 44 0 0 chr2 230789193 230789238 -22467345 + AT_rich Low_complexity Low_complexity 1 45 0 1471 256 19 46 chr2 230789483 230790097 -22466486 - L1M4 LINE L1 -1984 4162 3565 847 131 0 0 chr2 230790395 230790525 -22466058 + MSTB LTR MaLR 1 130 -296 1818 155 3 10 chr2 230790565 230790862 -22465721 - AluY SINE Alu -16 295 1 1471 324 100 10 chr2 230790864 230791576 -22465007 + L2 LINE L2 2062 2837 -477 551 157 8 33 chr2 230791611 230791732 -22464851 + Charlie5 DNA MER1_type 7 124 -2488 2280 125 0 0 chr2 230791732 230792044 -22464539 + AluSx SINE Alu 1 312 0 377 215 141 62 chr2 230792062 230792170 -22464413 + Charlie5 DNA MER1_type 2244 2342 -282 2318 80 3 0 chr2 230792170 230792472 -22464111 + AluY SINE Alu 1 303 -8 377 215 141 62 chr2 230792472 230792703 -22463880 + Charlie5 DNA MER1_type 2342 2610 -14 639 287 146 39 chr2 230792746 230793081 -22463502 + L2 LINE L2 2921 3291 -22 183 42 0 0 chr2 230793086 230793110 -22463473 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 933 113 8 0 chr2 230794643 230794767 -22461816 + AluSq/x SINE Alu 1 125 -188 423 0 0 0 chr2 230794776 230794823 -22461760 + (CA)n Simple_repeat Simple_repeat 2 48 0 2063 140 6 16 chr2 230794846 230795161 -22461422 + AluSx SINE Alu 1 312 0 2724 25 0 6 chr2 230795425 230795745 -22460838 - AluYb8 SINE Alu 0 318 1 364 256 205 0 chr2 230796613 230796730 -22459853 - MER5A DNA MER1_type -8 181 41 222 327 37 10 chr2 230796767 230796864 -22459719 + MIR SINE MIR 34 140 -68 25 51 0 0 chr2 230797291 230797330 -22459253 + AT_rich Low_complexity Low_complexity 1 39 0 1551 167 45 10 chr2 230797385 230797568 -22459015 - AluJo SINE Alu 0 312 114 231 61 0 0 chr2 230797568 230797601 -22458982 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 1551 167 45 10 chr2 230797601 230797705 -22458878 - AluJo SINE Alu -198 114 15 22 0 0 0 chr2 230797962 230797984 -22458599 + AT_rich Low_complexity Low_complexity 1 22 0 27 73 0 0 chr2 230799277 230799332 -22457251 + AT_rich Low_complexity Low_complexity 1 55 0 563 269 68 55 chr2 230799540 230799759 -22456824 - MIR SINE MIR 0 262 41 421 36 0 0 chr2 230799874 230799929 -22456654 - MADE1 DNA Mariner 0 80 26 357 182 15 0 chr2 230800499 230800565 -22456018 + MLT1F1 LTR MaLR 59 125 -442 1863 228 81 20 chr2 230800565 230800753 -22455830 + L1MD3 LINE L1 7404 7579 -416 1529 218 42 20 chr2 230800753 230801107 -22455476 + MLT1A1 LTR MaLR 1 362 -3 1863 228 81 20 chr2 230801107 230801476 -22455107 + L1MD3 LINE L1 7579 7995 0 413 246 6 97 chr2 230802154 230802329 -22454254 + MIR3 SINE MIR 25 183 -25 293 207 17 0 chr2 230802549 230802607 -22453976 - L2 LINE L2 -1244 2070 2012 2118 137 3 10 chr2 230802663 230802977 -22453606 - AluSx SINE Alu 0 312 1 587 327 72 27 chr2 230802979 230803426 -22453157 - LTR33 LTR ERVL -54 467 1 759 256 0 19 chr2 230804025 230804185 -22452398 - MER5A DNA MER1_type -16 173 17 307 306 50 39 chr2 230804458 230804638 -22451945 + L2 LINE L2 2278 2459 -855 441 302 138 0 chr2 230805770 230805959 -22450624 + MIR SINE MIR 46 260 -2 215 351 27 18 chr2 230806085 230806196 -22450387 + MIR SINE MIR 22 133 -75 27 0 0 0 chr2 230807667 230807694 -22448889 + AT_rich Low_complexity Low_complexity 1 27 0 230 178 0 44 chr2 230807832 230807877 -22448706 + C-rich Low_complexity Low_complexity 1 43 0 244 286 91 17 chr2 230808395 230808550 -22448033 - MIR SINE MIR -1 261 28 25 0 0 0 chr2 230808729 230808754 -22447829 + AT_rich Low_complexity Low_complexity 1 25 0 254 274 106 26 chr2 230809099 230809212 -22447371 - MIR SINE MIR -70 192 71 229 221 52 26 chr2 230810039 230810116 -22446467 + LTR33A LTR ERVL 445 523 0 24 0 0 0 chr2 230811350 230811374 -22445209 + AT_rich Low_complexity Low_complexity 1 24 0 478 209 65 20 chr2 230812590 230812743 -22443840 - HAL1 LINE L1 -40 2467 2308 374 268 146 38 chr2 230812743 230812982 -22443601 - L2 LINE L2 -4 3309 3045 2215 146 40 31 chr2 230813054 230813597 -22442986 - MLT2A2 LTR ERVL 0 554 1 1259 279 136 64 chr2 230813605 230814664 -22441919 - L2 LINE L2 -337 2977 1843 416 312 87 59 chr2 230814686 230815090 -22441493 - HAL1 LINE L1 -228 2279 1865 725 281 30 61 chr2 230815691 230815954 -22440629 + MIR SINE MIR 8 262 0 21 0 0 0 chr2 230816094 230816115 -22440468 + AT_rich Low_complexity Low_complexity 1 21 0 404 250 11 11 chr2 230816126 230816218 -22440365 - MER8 DNA MER2_type -133 106 15 276 167 36 24 chr2 230816221 230816305 -22440278 + (TA)n Simple_repeat Simple_repeat 2 86 0 14410 122 27 20 chr2 230816483 230818884 -22437699 + Tigger1 DNA MER2_type 1 2418 0 261 259 51 32 chr2 230818935 230819093 -22437490 - L1ME3A LINE L1 -243 5927 5767 2154 118 35 62 chr2 230820038 230820412 -22436171 - THE1B LTR MaLR 0 364 1 212 338 105 47 chr2 230820916 230821384 -22435199 - L2 LINE L2 -2 3311 2817 249 230 0 0 chr2 230821650 230821724 -22434859 + GA-rich Low_complexity Low_complexity 1 74 0 227 247 35 71 chr2 230821968 230822053 -22434530 + MIR SINE MIR 51 132 -130 258 164 0 0 chr2 230822724 230822779 -22433804 + (TG)n Simple_repeat Simple_repeat 2 56 0 363 179 26 13 chr2 230823245 230823323 -22433260 + MER58B DNA MER1_type 263 341 0 568 96 0 29 chr2 230823386 230823490 -22433093 + (TCCC)n Simple_repeat Simple_repeat 4 104 0 232 258 305 20 chr2 230824349 230824500 -22432083 + MIR SINE MIR 66 259 -3 448 282 80 31 chr2 230824658 230824821 -22431762 - MIR3 SINE MIR -6 202 32 212 384 27 0 chr2 230829289 230829401 -22427182 - L2 LINE L2 -213 3059 2945 189 0 0 0 chr2 230829987 230830008 -22426575 + (T)n Simple_repeat Simple_repeat 1 21 0 376 351 79 0 chr2 230831006 230831171 -22425412 - MIR SINE MIR -36 226 49 478 281 66 104 chr2 230831293 230831628 -22424955 + MLT2F LTR ERVL 36 357 -306 659 274 0 0 chr2 230831628 230831783 -22424800 - MER45A DNA AcHobo 0 178 24 367 285 97 18 chr2 230831838 230832003 -22424580 + MLT2F LTR ERVL 418 595 -68 272 207 23 23 chr2 230831996 230832083 -22424500 + MER105 DNA DNA 117 203 -1 * 1357 203 37 7 chr2 230832736 230833036 -22423547 - MER58B DNA MER1_type -3 338 30 200 133 44 0 chr2 230833415 230833460 -22423123 + (TATATG)n Simple_repeat Simple_repeat 1 47 0 22 0 0 0 chr2 230833878 230833900 -22422683 + AT_rich Low_complexity Low_complexity 1 22 0 204 125 0 0 chr2 230835108 230835140 -22421443 + (TCCA)n Simple_repeat Simple_repeat 2 33 0 345 330 19 9 chr2 230835152 230835258 -22421325 - L2 LINE L2 -21 3251 3145 252 266 26 26 chr2 230835773 230835886 -22420697 + MER46C DNA MER2_type 16 128 -210 225 0 0 0 chr2 230836029 230836054 -22420529 + (A)n Simple_repeat Simple_repeat 1 25 0 1625 139 7 90 chr2 230836056 230836405 -22420178 + AluSx SINE Alu 1 323 0 180 0 0 0 chr2 230837240 230837260 -22419323 + (T)n Simple_repeat Simple_repeat 1 20 0 236 385 14 14 chr2 230837338 230837481 -22419102 - MIR3 SINE MIR -65 143 1 324 0 0 0 chr2 230837500 230837536 -22419047 + (T)n Simple_repeat Simple_repeat 1 36 0 239 311 56 22 chr2 230838298 230838388 -22418195 + L2 LINE L2 3193 3285 -28 342 260 29 110 chr2 230838861 230839156 -22417427 + L1ME4a LINE L1 5540 5809 -327 2710 124 34 0 chr2 230839422 230839833 -22416750 + MSTA LTR MaLR 3 427 -1 200 157 20 20 chr2 230839835 230839886 -22416697 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 415 232 71 76 chr2 230839903 230840101 -22416482 + L1ME4a LINE L1 5923 6119 -2 236 381 99 27 chr2 230840172 230840395 -22416188 + MIR SINE MIR 24 262 0 2062 188 52 10 chr2 230840555 230840960 -22415623 - MSTB LTR MaLR 0 426 5 1881 152 0 0 chr2 230841216 230841485 -22415098 + AluSx SINE Alu 11 279 -33 186 71 0 0 chr2 230841486 230841514 -22415069 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 220 286 0 0 chr2 230841525 230841588 -22414995 + (CATA)n Simple_repeat Simple_repeat 2 64 0 235 333 24 24 chr2 230842736 230842859 -22413724 + MIR3 SINE MIR 13 135 -73 187 293 40 40 chr2 230843231 230843330 -22413253 + MIR3 SINE MIR 89 187 -21 631 259 35 29 chr2 230843974 230844148 -22412435 - MIR SINE MIR -5 257 83 202 61 0 30 chr2 230845218 230845251 -22411332 + MER91 DNA MER1_type 33 64 -76 2552 26 13 3 chr2 230845458 230845764 -22410819 + AluYa5 SINE Alu 1 309 -2 24 77 0 0 chr2 230845821 230845873 -22410710 + AT_rich Low_complexity Low_complexity 1 52 0 230 349 56 8 chr2 230845945 230846071 -22410512 - MIR3 SINE MIR -43 165 34 1118 267 137 22 chr2 230846151 230846604 -22409979 + MLT1D LTR MaLR 1 505 0 643 278 35 25 chr2 230847067 230847265 -22409318 + MIR SINE MIR 21 220 -42 1405 199 50 8 chr2 230847356 230847496 -22409087 - AluJo SINE Alu -38 274 141 270 0 0 0 chr2 230847496 230847526 -22409057 + (TTA)n Simple_repeat Simple_repeat 2 31 0 1405 199 50 8 chr2 230847526 230847647 -22408936 - AluJo SINE Alu -171 141 2 1173 248 85 41 chr2 230847711 230847767 -22408816 - MLT2B1 LTR ERVL 0 554 502 2021 138 11 38 chr2 230847767 230848138 -22408445 + MER46B DNA MER2_type 1 236 0 1173 248 85 41 chr2 230848138 230848565 -22408018 - MLT2B1 LTR ERVL -52 502 1 349 294 20 29 chr2 230848919 230849021 -22407562 + L2 LINE L2 3209 3309 -4 32 0 0 0 chr2 230849583 230849615 -22406968 + AT_rich Low_complexity Low_complexity 1 32 0 331 198 35 9 chr2 230849709 230849817 -22406766 - LTR33A LTR ERVL -3 554 441 399 21 0 0 chr2 230850438 230850486 -22406097 + (CA)n Simple_repeat Simple_repeat 2 49 0 2666 184 58 78 chr2 230850768 230851508 -22405075 + LTR8A LTR ERV1 3 727 0 458 303 73 6 chr2 230851714 230851892 -22404691 - LTR16A1 LTR ERVL 0 457 268 1327 252 68 36 chr2 230852045 230852600 -22403983 - L1MC4 LINE L1 -130 7912 7340 253 185 46 15 chr2 230853154 230853219 -22403364 - MLT2A1 LTR ERVL -8 512 446 225 75 57 0 chr2 230853219 230853272 -22403311 + (TA)n Simple_repeat Simple_repeat 1 56 0 2893 88 25 8 chr2 230853274 230853672 -22402911 - MLT2A1 LTR ERVL -39 405 1 2037 86 3 3 chr2 230853672 230853963 -22402620 - HERVL-A1 LTR ERVL 0 5654 5364 2337 104 23 12 chr2 230854065 230854411 -22402172 - HERVL-A1 LTR ERVL -551 5103 4754 * 31386 94 18 1 chr2 230854395 230859411 -22397172 - HERVL-A1 LTR ERVL -547 5217 1 265 0 0 0 chr2 230859411 230859440 -22397143 - MLT2A1 LTR ERVL 0 453 425 259 111 89 0 chr2 230859472 230859517 -22397066 + MLT2A1 LTR ERVL 352 400 -44 242 152 0 0 chr2 230859529 230859575 -22397008 + LTR66 LTR ERVL 394 439 -171 * 2432 88 66 12 chr2 230859540 230859911 -22396672 - MLT2A1 LTR ERVL -89 355 1 2339 179 23 62 chr2 230860065 230860551 -22396032 - MLT1C LTR MaLR 0 467 1 288 368 50 50 chr2 230860828 230861105 -22395478 - MLT1K LTR MaLR -115 473 197 1587 9 0 0 chr2 230862363 230862576 -22394007 + (TTC)n Simple_repeat Simple_repeat 1 213 0 1191 76 0 22 chr2 230862997 230863181 -22393402 + (TTC)n Simple_repeat Simple_repeat 1 180 0 292 59 39 20 chr2 230863181 230863232 -22393351 + (TTCTCC)n Simple_repeat Simple_repeat 1 52 0 485 314 63 5 chr2 230863354 230863545 -22393038 + MIR SINE MIR 25 226 -36 228 133 0 0 chr2 230864795 230864840 -22391743 - L1MC4 LINE L1 -1339 6703 6659 183 139 0 0 chr2 230864843 230864879 -22391704 + (CA)n Simple_repeat Simple_repeat 1 36 0 252 357 38 43 chr2 230864956 230865141 -22391442 - L2 LINE L2 -195 3077 2894 2327 80 7 0 chr2 230865191 230865478 -22391105 - AluY SINE Alu -22 289 1 181 179 0 51 chr2 230865872 230865911 -22390672 + MIR SINE MIR 218 254 -8 1729 196 28 17 chr2 230867372 230867724 -22388859 - MLT1A1 LTR MaLR 0 365 10 23 0 0 0 chr2 230868613 230868636 -22387947 + AT_rich Low_complexity Low_complexity 1 23 0 516 258 186 27 chr2 230869965 230870186 -22386397 + MIR SINE MIR 6 261 -1 22 0 0 0 chr2 230870491 230870513 -22386070 + AT_rich Low_complexity Low_complexity 1 22 0 244 250 0 0 chr2 230870769 230870813 -22385770 + L2 LINE L2 3139 3182 -90 4489 175 37 60 chr2 230870942 230871020 -22385563 + L1MC3 LINE L1 6571 6649 -1136 2298 101 0 7 chr2 230871020 230871327 -22385256 - AluSx SINE Alu -7 305 1 4489 175 37 60 chr2 230871327 230872296 -22384287 + L1MC3 LINE L1 6649 7594 -191 1058 170 16 0 chr2 230872296 230872490 -22384093 + L1MC2 LINE L1 6137 6333 -11 1674 146 49 36 chr2 230872502 230872626 -22383957 + AluJo SINE Alu 1 122 -190 399 21 0 0 chr2 230872626 230872674 -22383909 + (TAA)n Simple_repeat Simple_repeat 2 49 0 1674 146 49 36 chr2 230872674 230872857 -22383726 + AluJo SINE Alu 122 312 0 406 232 91 0 chr2 230874270 230874404 -22382179 - MER45A DNA AcHobo -21 157 1 295 308 195 0 chr2 230874423 230874592 -22381991 + MIR SINE MIR 49 250 -12 2220 96 0 7 chr2 230874599 230874892 -22381691 + AluSx SINE Alu 1 291 -21 21 36 0 0 chr2 230875916 230875944 -22380639 + AT_rich Low_complexity Low_complexity 1 28 0 475 234 78 0 chr2 230876362 230876503 -22380080 + L2 LINE L2 1979 2130 -1184 292 233 12 58 chr2 230876542 230876628 -22379955 + LTR33 LTR ERVL 23 104 -417 1089 181 56 17 chr2 230876639 230876871 -22379712 + MLT1C LTR MaLR 10 250 -217 2110 127 85 113 chr2 230876871 230877342 -22379241 - LTR32 LTR ERVL 0 471 14 374 157 29 0 chr2 230877346 230877416 -22379167 + MLT1C LTR MaLR 251 322 -145 1054 140 0 6 chr2 230877486 230877664 -22378919 - L1PA10 LINE L1 -964 5182 5006 6037 101 19 35 chr2 230877664 230877844 -22378739 + L1PA10 LINE L1 5198 5379 -789 2851 67 9 0 chr2 230877844 230878190 -22378393 + L1PA6 LINE L1 5800 6148 -6 6037 101 19 35 chr2 230878190 230878990 -22377593 + L1PA10 LINE L1 5379 6167 -1 1187 253 99 104 chr2 230879059 230879433 -22377150 + L2 LINE L2 2146 2520 -793 3175 195 21 28 chr2 230879433 230879980 -22376603 + L1MB4 LINE L1 5511 6054 -126 2392 88 0 0 chr2 230879980 230880276 -22376307 + AluSx SINE Alu 1 296 -16 3175 195 21 28 chr2 230880276 230880400 -22376183 + L1MB4 LINE L1 6054 6177 -3 1187 253 99 104 chr2 230880400 230881307 -22375276 + L2 LINE L2 2520 3313 0 477 158 18 70 chr2 230881410 230881435 -22375148 - L1PA16 LINE L1 -2 6164 6139 1768 147 0 0 chr2 230881435 230881700 -22374883 - AluSx SINE Alu -15 297 33 477 158 18 70 chr2 230881700 230881788 -22374795 - L1PA16 LINE L1 -27 6139 6057 332 145 0 32 chr2 230882024 230882086 -22374497 - MLT2B1 LTR ERVL 0 554 495 732 47 54 8 chr2 230882086 230882215 -22374368 + (TAGA)n Simple_repeat Simple_repeat 3 137 0 1569 240 41 59 chr2 230882230 230882739 -22373844 - MLT2B1 LTR ERVL -20 500 1 233 212 224 12 chr2 230883281 230883366 -22373217 + MER5A DNA MER1_type 10 112 -77 388 303 116 12 chr2 230883409 230883592 -22372991 + MIR SINE MIR 60 259 -3 219 314 57 32 chr2 230883719 230883843 -22372740 - L2 LINE L2 -13 3300 3174 439 284 121 42 chr2 230884420 230884684 -22371899 - Charlie8 DNA MER1_type -2131 286 2 528 320 6 17 chr2 230884755 230884933 -22371650 - MER5B DNA MER1_type -2 176 1 195 253 95 53 chr2 230886355 230886450 -22370133 + MIR SINE MIR 113 211 -51 607 266 141 37 chr2 230887864 230888161 -22368422 - L2 LINE L2 -34 3279 2952 2356 84 17 3 chr2 230888183 230888482 -22368101 + AluY SINE Alu 1 303 -8 230 354 46 93 chr2 230888693 230889125 -22367458 - L2 LINE L2 -55 3217 2806 665 203 176 28 chr2 230889540 230889722 -22366861 - MER3 DNA MER1_type 0 209 1 327 285 124 43 chr2 230889942 230890128 -22366455 - MIR SINE MIR -14 248 48 189 0 0 0 chr2 230890168 230890189 -22366394 + (TCTA)n Simple_repeat Simple_repeat 1 21 0 189 0 0 0 chr2 230890204 230890225 -22366358 + (TA)n Simple_repeat Simple_repeat 1 21 0 2288 92 3 13 chr2 230890301 230890615 -22365968 + AluSp SINE Alu 1 311 -2 1960 152 76 22 chr2 230890673 230891029 -22365554 - THE1C LTR MaLR 0 375 1 601 283 111 54 chr2 230891301 230891930 -22364653 - L1ME LINE L1 -402 5760 5036 2341 97 0 0 chr2 230891930 230892228 -22364355 - AluY SINE Alu -13 298 1 601 283 111 54 chr2 230892228 230892668 -22363915 - L1ME LINE L1 -1126 5036 4623 282 311 203 19 chr2 230893117 230893329 -22363254 + MIR SINE MIR 1 251 -11 2304 156 6 0 chr2 230893462 230893808 -22362775 + MER7A DNA MER2_type 1 346 0 388 266 130 31 chr2 230893916 230894108 -22362475 + MIR SINE MIR 47 257 -5 460 291 92 68 chr2 230894127 230894378 -22362205 + MIR SINE MIR 6 262 0 598 296 20 10 chr2 230895579 230895782 -22360801 - MLT1J LTR MaLR -239 272 68 325 361 42 33 chr2 230898094 230898307 -22358276 + L1MEd LINE L1 374 588 -5531 378 0 0 0 chr2 230898464 230898506 -22358077 + (CA)n Simple_repeat Simple_repeat 2 43 0 518 263 54 49 chr2 230898608 230898996 -22357587 + L1MEd LINE L1 797 1186 -4933 284 284 133 11 chr2 230899126 230899408 -22357175 + L1M1 LINE L1 2715 3132 -794 2267 103 0 7 chr2 230899846 230900146 -22356437 + AluSx SINE Alu 1 298 -14 242 242 15 0 chr2 230900180 230900246 -22356337 + L1ME LINE L1 5765 5831 -331 422 262 51 126 chr2 230900249 230900686 -22355897 + MLT1J LTR MaLR 27 494 -17 207 232 0 0 chr2 230900788 230900844 -22355739 + (CATATA)n Simple_repeat Simple_repeat 4 59 0 252 250 0 0 chr2 230901185 230901252 -22355331 + MIR SINE MIR 72 139 -69 591 245 19 25 chr2 230901670 230901829 -22354754 + MIR SINE MIR 97 254 -8 228 235 10 20 chr2 230902227 230902329 -22354254 + CT-rich Low_complexity Low_complexity 3 103 0 285 222 91 85 chr2 230902825 230903001 -22353582 + MLT1K LTR MaLR 395 571 -17 205 161 0 0 chr2 230904763 230904794 -22351789 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 310 286 152 29 chr2 230905107 230905212 -22351371 - MIR SINE MIR -63 145 26 273 319 6 56 chr2 230905525 230905653 -22350930 - MER117 DNA MER1_type -44 153 33 2200 189 51 16 chr2 230905653 230906104 -22350479 + MLT1C LTR MaLR 1 467 0 273 319 6 56 chr2 230906104 230906135 -22350448 - MER117 DNA MER1_type -164 33 2 203 0 37 0 chr2 230906155 230906182 -22350401 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 202 205 0 0 chr2 230906697 230906736 -22349847 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 607 225 92 0 chr2 230907492 230907612 -22348971 + FRAM SINE Alu 2 132 -44 559 138 64 0 chr2 230907963 230908072 -22348511 - MER53 DNA DNA -73 116 1 1555 206 76 31 chr2 230910107 230910622 -22345961 + L1ME LINE L1 2701 3238 -2908 2086 155 44 37 chr2 230910622 230911178 -22345405 + MLT2A2 LTR ERVL 1 554 0 446 285 61 63 chr2 230911178 230911557 -22345026 + L1ME LINE L1 3234 3611 -2535 268 287 7 33 chr2 230911660 230911810 -22344773 + (TA)n Simple_repeat Simple_repeat 1 146 0 4632 230 62 33 chr2 230911820 230911969 -22344614 + L1ME LINE L1 3796 3939 -2227 2074 115 3 29 chr2 230911969 230912282 -22344301 + AluSx SINE Alu 1 305 -7 4632 230 62 33 chr2 230912282 230913826 -22342757 + L1ME LINE L1 3939 5527 -639 1870 217 10 10 chr2 230914013 230914409 -22342174 + MSTD LTR MaLR 1 396 0 28 29 0 0 chr2 230914558 230914593 -22341990 + AT_rich Low_complexity Low_complexity 1 35 0 239 264 126 0 chr2 230915141 230915228 -22341355 + MIR SINE MIR 163 260 -2 203 125 25 0 chr2 230916023 230916063 -22340520 + (TAG)n Simple_repeat Simple_repeat 1 41 0 307 237 0 11 chr2 230916192 230916210 -22340373 - L1MA10 LINE L1 0 6334 6317 2155 235 112 25 chr2 230916210 230916555 -22340028 - L1ME2 LINE L1 -9 6155 5841 527 272 53 44 chr2 230916555 230916761 -22339822 + MER63A DNA MER1_type 1 208 -2 2155 235 112 25 chr2 230916761 230917268 -22339315 - L1ME2 LINE L1 -323 5841 5238 222 91 55 0 chr2 230917276 230917331 -22339252 + (TCTA)n Simple_repeat Simple_repeat 1 58 0 341 125 111 0 chr2 230917384 230917456 -22339127 - L1MC2 LINE L1 -8 6336 6257 678 298 54 47 chr2 230917507 230918212 -22338371 - L1MDa LINE L1 -4568 1647 938 315 49 0 0 chr2 230918268 230918309 -22338274 + (TG)n Simple_repeat Simple_repeat 2 42 0 1577 193 14 0 chr2 230918319 230918594 -22337989 + MER74A LTR ERVL 50 328 -230 1134 245 30 25 chr2 230918599 230918961 -22337622 - L1ME LINE L1 -369 5793 5433 869 192 28 16 chr2 230918997 230919179 -22337404 + MER74A LTR ERVL 375 558 0 203 311 0 0 chr2 230919182 230919243 -22337340 + (CATA)n Simple_repeat Simple_repeat 4 64 0 330 342 68 30 chr2 230919275 230919775 -22336808 - L1MDa LINE L1 -5532 864 346 1563 189 67 29 chr2 230920893 230921269 -22335314 - MLT1B LTR MaLR 0 390 1 1954 184 41 37 chr2 230921637 230922186 -22334397 - MLT2A2 LTR ERVL 0 554 1 8855 101 58 5 chr2 230922186 230923459 -22333124 - HERVL-A2 LTR ERVL 0 5654 4314 2637 103 3 11 chr2 230923466 230923844 -22332739 - THE1C LTR MaLR 0 375 1 9828 119 30 27 chr2 230923844 230925420 -22331163 - THE1C-int LTR MaLR 0 1580 1 2463 129 3 13 chr2 230925420 230925799 -22330784 - THE1C LTR MaLR 0 375 1 369 289 67 37 chr2 230926354 230926489 -22330094 + MER102b DNA MER1_type 202 340 -1 2251 85 3 0 chr2 230926492 230926774 -22329809 - AluY SINE Alu -28 283 1 818 339 55 7 chr2 230927163 230927470 -22329113 + MER115 DNA AcHobo 90 411 -282 405 326 145 33 chr2 230927540 230927960 -22328623 + L2 LINE L2 2833 3299 -14 580 308 51 26 chr2 230928091 230928364 -22328219 - MLT1I LTR MaLR -60 349 70 21 36 0 0 chr2 230928514 230928542 -22328041 + AT_rich Low_complexity Low_complexity 1 28 0 2283 96 0 3 chr2 230929544 230929836 -22326747 - AluSq SINE Alu -22 291 1 24 91 0 0 chr2 230930344 230930410 -22326173 + AT_rich Low_complexity Low_complexity 1 66 0 794 169 0 8 chr2 230930466 230930611 -22325972 + AluJ SINE Alu 3 133 -169 682 165 0 0 chr2 230930611 230930720 -22325863 + AluJ SINE Alu 187 295 -17 245 221 45 72 chr2 230930721 230930943 -22325640 - L1ME4a LINE L1 -131 5990 5775 1024 164 9 59 chr2 230931661 230931881 -22324702 - MER3 DNA MER1_type 0 209 1 2403 69 3 10 chr2 230932163 230932468 -22324115 - AluY SINE Alu -8 303 1 264 59 0 0 chr2 230933788 230933822 -22322761 + (TG)n Simple_repeat Simple_repeat 1 34 0 422 350 83 33 chr2 230934145 230934600 -22321983 - L1ME4a LINE L1 -358 5804 5327 454 209 35 0 chr2 230935074 230935189 -22321394 - L1ME4a LINE L1 -815 5331 5213 316 364 64 7 chr2 230935189 230935329 -22321254 + MIR3 SINE MIR 46 193 -15 2235 100 6 31 chr2 230937012 230937333 -22319250 + AluSq SINE Alu 1 313 0 342 299 81 40 chr2 230938048 230938369 -22318214 - L1ME4a LINE L1 -1325 4821 4488 238 277 15 0 chr2 230938594 230938659 -22317924 + MIR SINE MIR 188 253 -9 1644 182 105 11 chr2 230938694 230939056 -22317527 - MSTD LTR MaLR 0 396 1 1423 178 10 34 chr2 230939177 230939620 -22316963 + L1M2 LINE L1 5134 5567 -724 324 345 50 5 chr2 230939768 230939968 -22316615 - HAL1 LINE L1 -1595 912 704 1896 149 34 3 chr2 230940237 230940533 -22316050 - AluSg SINE Alu -5 305 1 369 350 87 39 chr2 230941158 230941570 -22315013 - L2 LINE L2 -467 2847 2416 191 88 29 0 chr2 230941920 230941954 -22314629 + (CA)n Simple_repeat Simple_repeat 2 36 0 180 333 49 10 chr2 230943387 230943489 -22313094 - MIR SINE MIR -70 192 87 281 261 34 23 chr2 230943881 230943969 -22312614 + L2 LINE L2 3225 3313 0 513 311 33 0 chr2 230944864 230945015 -22311568 + MIR3 SINE MIR 2 157 -51 368 277 36 51 chr2 230945042 230945179 -22311404 + MER5B DNA MER1_type 15 149 -29 1696 113 11 0 chr2 230945346 230945621 -22310962 + L1MA2 LINE L1 6027 6304 0 213 39 0 0 chr2 230945985 230946011 -22310572 + (TG)n Simple_repeat Simple_repeat 2 27 0 361 298 101 24 chr2 230947377 230947545 -22309038 + MIR SINE MIR 28 208 -54 302 277 112 28 chr2 230947653 230947845 -22308738 + MIR SINE MIR 16 229 -33 239 325 73 8 chr2 230948009 230948132 -22308451 - MIR SINE MIR -50 212 82 232 315 164 18 chr2 230949496 230949661 -22306922 - MIR SINE MIR -25 237 49 234 330 20 10 chr2 230949850 230949950 -22306633 - MIR3 SINE MIR -3 205 105 331 279 10 19 chr2 230950427 230950531 -22306052 + L1MC4 LINE L1 6611 6713 -1329 359 322 42 14 chr2 230951395 230951608 -22304975 + MIR SINE MIR 1 219 -43 4945 64 2 0 chr2 230951933 230952554 -22304029 - L1PA7 LINE L1 -13 6141 5520 201 178 0 0 chr2 230952578 230952623 -22303960 + (TATG)n Simple_repeat Simple_repeat 2 46 0 318 50 0 0 chr2 230953483 230953523 -22303060 + (TG)n Simple_repeat Simple_repeat 1 40 0 425 304 80 44 chr2 230953531 230953816 -22302767 - L2 LINE L2 -154 3159 2846 931 207 92 30 chr2 230953816 230954120 -22302463 + MER33 DNA MER1_type 1 323 -1 425 304 80 44 chr2 230954120 230954181 -22302402 - L2 LINE L2 -467 2846 2789 313 213 29 118 chr2 230954228 230954364 -22302219 + L1MC4 LINE L1 6580 6703 -1339 301 196 0 0 chr2 230954387 230954443 -22302140 - L1MC4 LINE L1 -1339 6703 6648 1401 273 126 18 chr2 230954449 230955006 -22301577 - L2 LINE L2 -576 2738 2122 907 271 40 4 chr2 230955800 230956051 -22300532 + MIR SINE MIR 3 262 0 4938 270 71 19 chr2 230956393 230958376 -22298207 + L1MEc LINE L1 52 2136 -4260 747 255 81 30 chr2 230959996 230960329 -22296254 - MLT1I LTR MaLR 0 409 60 527 322 66 72 chr2 230960367 230960477 -22296106 + L2 LINE L2 2923 3032 -240 1811 145 47 50 chr2 230960477 230960815 -22295768 - MER1B DNA MER1_type 0 337 1 527 322 66 72 chr2 230960815 230961052 -22295531 + L2 LINE L2 3032 3268 -4 488 312 30 2 chr2 230962025 230962235 -22294348 + MLT1J1 LTR MaLR 1 214 -236 445 316 32 19 chr2 230962399 230962557 -22294026 - MIR SINE MIR -94 168 9 37 39 0 0 chr2 230962798 230962849 -22293734 + AT_rich Low_complexity Low_complexity 1 51 0 613 264 72 5 chr2 230963610 230963803 -22292780 + MLT1H1 LTR MaLR 30 235 -320 2475 89 0 19 chr2 230963804 230964174 -22292409 - L1PA10 LINE L1 -283 5885 5523 962 104 0 0 chr2 230964166 230964320 -22292263 + L1PA10 LINE L1 6014 6167 0 * 552 269 43 56 chr2 230964349 230964754 -22291829 + MLT1G3 LTR MaLR 25 410 -132 521 276 115 61 chr2 230964931 230965192 -22291391 + MLT1H1 LTR MaLR 269 548 -6 2232 116 0 7 chr2 230966752 230967062 -22289521 + AluSc SINE Alu 1 308 -1 293 315 34 0 chr2 230967498 230967587 -22288996 + MER5A DNA MER1_type 9 100 -89 184 389 9 9 chr2 230967694 230967807 -22288776 + L3 LINE CR1 207 319 -1258 514 227 39 135 chr2 230967915 230967946 -22288637 + MIR SINE MIR 6 38 -224 2518 78 0 0 chr2 230967946 230968253 -22288330 + AluSq SINE Alu 1 307 -6 514 227 39 135 chr2 230968253 230968450 -22288133 + MIR SINE MIR 38 212 -50 1114 179 22 5 chr2 230968466 230968690 -22287893 + L1MD3 LINE L1 7748 7975 -20 193 337 23 23 chr2 230968908 230968994 -22287589 + L3 LINE CR1 648 733 -844 764 302 148 33 chr2 230969639 230970203 -22286380 + Charlie7 DNA MER1_type 5 650 -1962 887 194 45 59 chr2 230970203 230970425 -22286158 + MER20 DNA MER1_type 1 219 0 764 302 148 33 chr2 230970425 230970489 -22286094 + Charlie7 DNA MER1_type 650 705 -1907 559 313 62 8 chr2 230970637 230970896 -22285687 + L3 LINE CR1 1146 1418 -159 4435 162 50 1 chr2 230971147 230971970 -22284613 - L1PA16 LINE L1 -1 6165 5303 3964 173 20 0 chr2 230971937 230972750 -22283833 - L1 LINE L1 -1249 4897 4069 * 847 263 49 16 chr2 230972940 230973183 -22283400 + MIR SINE MIR 12 262 0 23 33 0 0 chr2 230974264 230974294 -22282289 + AT_rich Low_complexity Low_complexity 1 30 0 213 316 112 51 chr2 230975294 230975392 -22281191 + L2 LINE L2 3121 3224 -48 28 29 0 0 chr2 230975768 230975803 -22280780 + AT_rich Low_complexity Low_complexity 1 35 0 809 217 0 0 chr2 230975806 230975958 -22280625 - FRAM SINE Alu -24 152 1 618 277 164 26 chr2 230976355 230976702 -22279881 + L2 LINE L2 2821 3215 -98 242 362 58 0 chr2 230976698 230976767 -22279816 - L2 LINE L2 -45 3227 3155 * 2670 10 0 0 chr2 230977001 230977294 -22279289 + AluYa5 SINE Alu 1 293 -18 360 158 0 0 chr2 230977461 230977518 -22279065 - MIR3 SINE MIR -14 194 138 210 143 0 0 chr2 230978240 230978275 -22278308 + (T)n Simple_repeat Simple_repeat 1 35 0 1849 157 9 38 chr2 230978277 230978595 -22277988 - AluSx SINE Alu -3 309 1 25 51 0 0 chr2 230978689 230978728 -22277855 + AT_rich Low_complexity Low_complexity 1 39 0 2340 103 0 7 chr2 230979347 230979657 -22276926 - AluSq SINE Alu -5 308 1 435 354 49 68 chr2 230979909 230980336 -22276247 - L2 LINE L2 -2 3270 2852 194 206 0 0 chr2 230981954 230981988 -22274595 - L2 LINE L2 -15 3298 3265 258 194 0 0 chr2 230982189 230982251 -22274332 + (CA)n Simple_repeat Simple_repeat 2 63 0 22 0 0 0 chr2 230982470 230982492 -22274091 + AT_rich Low_complexity Low_complexity 1 22 0 644 285 55 72 chr2 230983575 230983975 -22272608 - MLT1I LTR MaLR -8 401 9 1645 168 19 0 chr2 230984341 230984603 -22271980 - AluJb SINE Alu -18 294 28 35 24 0 0 chr2 230984728 230984770 -22271813 + AT_rich Low_complexity Low_complexity 1 42 0 288 292 130 41 chr2 230985320 230985759 -22270824 + HAL1 LINE L1 806 1283 -1224 181 350 0 0 chr2 230985809 230985869 -22270714 + MIR SINE MIR 56 115 -147 22 35 0 0 chr2 230985951 230985980 -22270603 + AT_rich Low_complexity Low_complexity 1 29 0 232 266 139 70 chr2 230986485 230986643 -22269940 - MIR3 SINE MIR -7 201 33 392 343 104 44 chr2 230987619 230988209 -22268374 + L2 LINE L2 2322 2951 -321 465 304 110 0 chr2 230988291 230988482 -22268101 + MIR SINE MIR 50 261 -1 185 235 29 44 chr2 230989326 230989394 -22267189 + MIR3 SINE MIR 136 202 -6 261 57 0 0 chr2 230989432 230989467 -22267116 + (A)n Simple_repeat Simple_repeat 1 35 0 335 262 47 19 chr2 230989839 230989946 -22266637 - L2 LINE L2 0 3313 3204 470 250 34 14 chr2 230990581 230990729 -22265854 - LTR41 LTR ERVL -615 158 8 254 192 10 154 chr2 230991220 230991324 -22265259 + MIR SINE MIR 156 244 -18 279 350 146 5 chr2 230991471 230991677 -22264906 - MIR SINE MIR -13 249 15 388 310 13 38 chr2 230992661 230992819 -22263764 - MIR SINE MIR -95 167 14 329 318 39 23 chr2 230993939 230994068 -22262515 - L2 LINE L2 -4 3309 3179 1733 160 36 0 chr2 230994651 230994932 -22261651 + AluSx SINE Alu 9 299 -13 343 192 10 10 chr2 230994934 230995033 -22261550 + (TA)n Simple_repeat Simple_repeat 1 99 0 183 156 0 0 chr2 230996231 230996263 -22260320 + CT-rich Low_complexity Low_complexity 6 37 0 246 226 28 0 chr2 230996651 230996757 -22259826 + GA-rich Low_complexity Low_complexity 1 109 0 331 182 133 138 chr2 230998594 230998797 -22257786 - L1MC4 LINE L1 -5 8037 7836 3845 165 84 3 chr2 230999671 231000435 -22256148 - LTR1B LTR ERV1 0 826 1 311 300 9 18 chr2 231001075 231001185 -22255398 + GA-rich Low_complexity Low_complexity 2 110 0 21 0 0 0 chr2 231002383 231002404 -22254179 + AT_rich Low_complexity Low_complexity 1 21 0 2329 112 0 0 chr2 231003805 231004109 -22252474 - AluSq SINE Alu -9 304 1 187 296 0 19 chr2 231004406 231004460 -22252123 - L2 LINE L2 -201 3071 3019 189 0 0 0 chr2 231004650 231004671 -22251912 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 546 16 0 0 chr2 231005674 231005737 -22250846 + (GGAA)n Simple_repeat Simple_repeat 1 63 0 775 237 71 12 chr2 231006151 231006354 -22250229 - L1ME3 LINE L1 0 6162 5972 2430 70 0 3 chr2 231006354 231006656 -22249927 - AluY SINE Alu -10 301 1 775 237 71 12 chr2 231006656 231006853 -22249730 - L1ME3 LINE L1 -190 5972 5703 280 271 73 0 chr2 231006932 231007028 -22249555 + MIR SINE MIR 47 149 -113 350 362 35 78 chr2 231008817 231008988 -22247595 + L2 LINE L2 2897 3047 -225 2113 119 0 3 chr2 231008988 231009281 -22247302 + AluSx SINE Alu 1 292 -20 350 362 35 78 chr2 231009281 231009457 -22247126 + L2 LINE L2 3047 3229 -43 450 355 105 43 chr2 231011224 231012053 -22244530 + L2 LINE L2 1901 2780 -534 202 139 23 0 chr2 231012066 231012109 -22244474 + (CAA)n Simple_repeat Simple_repeat 1 44 0 354 309 40 104 chr2 231012642 231012891 -22243692 + MIR SINE MIR 30 262 0 1543 104 9 18 chr2 231013795 231014015 -22242568 - AluSc SINE Alu -6 303 86 1167 190 104 26 chr2 231014297 231014566 -22242017 + AluJb SINE Alu 1 290 -12 206 368 118 0 chr2 231014629 231014765 -22241818 - MIR SINE MIR -62 200 49 410 196 11 0 chr2 231015715 231015807 -22240776 + (TA)n Simple_repeat Simple_repeat 1 93 0 281 330 19 0 chr2 231017457 231017560 -22239023 - L2 LINE L2 -215 3057 2953 197 359 199 7 chr2 231017902 231018309 -22238274 - L2 LINE L2 -555 2759 2275 2573 139 29 2 chr2 231018315 231018726 -22237857 - MSTA LTR MaLR -6 422 1 253 262 33 0 chr2 231019043 231019104 -22237479 + GA-rich Low_complexity Low_complexity 2 64 0 287 344 49 11 chr2 231019329 231019512 -22237071 - L2 LINE L2 -559 2755 2566 200 304 89 0 chr2 231019775 231019854 -22236729 + MER91C DNA MER1_type 31 116 -24 1119 129 4 120 chr2 231019952 231020193 -22236390 + MER20 DNA MER1_type 3 215 -4 21 36 0 0 chr2 231021439 231021467 -22235116 + AT_rich Low_complexity Low_complexity 1 28 0 2545 67 0 6 chr2 231022147 231022460 -22234123 - AluY SINE Alu 0 311 1 591 252 101 32 chr2 231022495 231022713 -22233870 - MIR SINE MIR -5 257 25 729 311 32 16 chr2 231022801 231023052 -22233531 - MIR SINE MIR -6 256 2 26 0 0 0 chr2 231023504 231023530 -22233053 + AT_rich Low_complexity Low_complexity 1 26 0 1927 159 0 0 chr2 231024127 231024416 -22232167 + AluSx SINE Alu 3 291 -21 1758 271 95 29 chr2 231024416 231025245 -22231338 - HAL1 LINE L1 -47 2460 1577 648 259 103 80 chr2 231025246 231025770 -22230813 + MLT1G1 LTR MaLR 1 594 -1 1240 241 83 158 chr2 231025784 231026814 -22229769 - HAL1 LINE L1 -941 1566 693 408 40 0 0 chr2 231026814 231026864 -22229719 + (TTTC)n Simple_repeat Simple_repeat 3 52 0 1240 241 83 158 chr2 231026864 231027413 -22229170 - HAL1 LINE L1 -1814 693 105 937 264 75 82 chr2 231027495 231028045 -22228538 - MLT1H LTR MaLR -2 547 2 1878 219 87 21 chr2 231028082 231028370 -22228213 + MLT1D LTR MaLR 1 334 -171 2199 151 31 14 chr2 231028370 231028728 -22227855 + THE1B LTR MaLR 1 364 0 1878 219 87 21 chr2 231028728 231028913 -22227670 + MLT1D LTR MaLR 334 505 0 274 125 21 0 chr2 231029128 231029176 -22227407 + MER103 DNA DNA 113 161 -5 247 303 138 55 chr2 231029220 231029474 -22227109 - L2 LINE L2 -16 3297 3023 2204 122 7 0 chr2 231029920 231030216 -22226367 + AluSg SINE Alu 1 298 -12 384 367 53 0 chr2 231030555 231030705 -22225878 - MIR3 SINE MIR -21 187 30 357 250 61 27 chr2 231031557 231031705 -22224878 - MER117 DNA MER1_type 0 197 45 2262 111 0 0 chr2 231031849 231032147 -22224436 - AluSx SINE Alu -14 298 1 1686 149 187 16 chr2 231032283 231032646 -22223937 - MSTA LTR MaLR -3 425 1 9690 122 34 33 chr2 231032646 231034220 -22222363 - THE1C-int LTR MaLR 0 1580 5 1754 157 61 28 chr2 231034224 231034587 -22221996 - THE1C LTR MaLR 0 375 1 839 267 157 36 chr2 231035755 231036118 -22220465 + MLT1I LTR MaLR 1 407 -2 226 273 65 26 chr2 231036609 231036686 -22219897 + MIR SINE MIR 68 147 -115 324 376 0 14 chr2 231036798 231036939 -22219644 + MER63A DNA MER1_type 65 203 -7 464 120 0 13 chr2 231036954 231037029 -22219554 + MADE1 DNA Mariner 4 77 -3 469 181 93 116 chr2 231038623 231038911 -22217672 + L1MC/D LINE L1 1399 1645 -4895 9813 170 27 17 chr2 231038924 231041865 -22214718 - L1PB1 LINE L1 -1 6150 3178 4233 253 47 33 chr2 231042007 231042363 -22214220 + L1MC/D LINE L1 2341 2691 -3849 222 37 0 0 chr2 231042363 231042390 -22214193 + (CA)n Simple_repeat Simple_repeat 2 28 0 4233 253 47 33 chr2 231042390 231044058 -22212525 + L1MC/D LINE L1 2691 4399 -2141 881 256 131 13 chr2 231044053 231044435 -22212148 + L1MC/D LINE L1 4660 5086 -1454 * 345 340 97 5 chr2 231044497 231044780 -22211803 + L1MC/D LINE L1 5699 6010 -818 2168 109 3 3 chr2 231044955 231045248 -22211335 + AluSc SINE Alu 1 293 -16 23 0 0 0 chr2 231046098 231046121 -22210462 + AT_rich Low_complexity Low_complexity 1 23 0 242 213 26 110 chr2 231046160 231046315 -22210268 + HAL1 LINE L1 2024 2165 -342 36 62 0 0 chr2 231046315 231046379 -22210204 + AT_rich Low_complexity Low_complexity 1 64 0 226 259 17 60 chr2 231046701 231046817 -22209766 + HAL1 LINE L1 2321 2431 -76 2215 70 3 7 chr2 231046817 231047101 -22209482 + AluY SINE Alu 1 283 -28 25 95 0 0 chr2 231047441 231047515 -22209068 + AT_rich Low_complexity Low_complexity 1 74 0 240 210 0 16 chr2 231048819 231048881 -22207702 + CT-rich Low_complexity Low_complexity 2 62 0 26 0 0 0 chr2 231049279 231049305 -22207278 + AT_rich Low_complexity Low_complexity 1 26 0 1963 97 3 63 chr2 231049307 231049607 -22206976 - AluSx SINE Alu -30 282 1 213 39 0 0 chr2 231049809 231049835 -22206748 + (GA)n Simple_repeat Simple_repeat 1 26 0 415 239 8 8 chr2 231050243 231050360 -22206223 + L1ME3A LINE L1 6034 6150 -20 1357 211 28 28 chr2 231101280 231101640 -22154943 - L1M4 LINE L1 -1718 4428 4069 2221 98 25 0 chr2 231101641 231101927 -22154656 - AluY SINE Alu -18 293 1 2085 212 44 21 chr2 231102071 231102636 -22153947 - L1M4 LINE L1 -2127 4019 3442 1962 107 54 0 chr2 231104389 231104669 -22151914 + AluSx SINE Alu 1 295 -17 23 54 0 0 chr2 231104912 231104949 -22151634 + AT_rich Low_complexity Low_complexity 1 37 0 2451 78 0 3 chr2 231105948 231106256 -22150327 - AluSx SINE Alu -5 307 1 2724 29 0 3 chr2 231107234 231107543 -22149040 + AluY SINE Alu 1 308 -3 2331 58 0 0 chr2 231107858 231108135 -22148448 - AluY SINE Alu -12 299 23 312 27 0 0 chr2 231108202 231108239 -22148344 + (CA)n Simple_repeat Simple_repeat 2 38 0 21 0 0 0 chr2 231108349 231108370 -22148213 + AT_rich Low_complexity Low_complexity 1 21 0 2422 85 0 3 chr2 231109045 231109352 -22147231 + AluSx SINE Alu 1 306 -6 259 370 58 29 chr2 231112356 231112529 -22144054 + MIR SINE MIR 10 187 -75 3630 123 89 7 chr2 231112742 231113327 -22143256 + MER41B LTR ERV1 1 633 -2 276 236 14 0 chr2 231115048 231115120 -22141463 - L1MD2 LINE L1 -429 5930 5858 647 263 43 32 chr2 231115122 231115308 -22141275 + MLT1D LTR MaLR 1 188 -317 1217 123 6 0 chr2 231115311 231115481 -22141102 + AluY SINE Alu 1 171 -140 908 291 115 41 chr2 231115582 231116341 -22140242 - L1ME LINE L1 -5253 817 3 230 423 27 0 chr2 231116736 231116885 -22139698 - MIR3 SINE MIR -10 198 46 488 269 11 75 chr2 231117081 231117267 -22139316 - MIR SINE MIR -71 191 18 477 298 135 14 chr2 231117475 231117683 -22138900 - MIR SINE MIR -15 247 15 189 0 0 0 chr2 231118952 231118973 -22137610 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 780 250 21 5 chr2 231119454 231119646 -22136937 + AluY SINE Alu 106 300 -11 1018 206 169 8 chr2 231119646 231119913 -22136670 + MLT1D LTR MaLR 196 505 0 1138 243 19 0 chr2 231119929 231120196 -22136387 - L1MD2 LINE L1 -518 5841 5570 185 73 0 73 chr2 231120805 231120846 -22135737 + (TTTAA)n Simple_repeat Simple_repeat 5 42 0 310 263 240 23 chr2 231121172 231121472 -22135111 - L1MD2 LINE L1 -2154 3992 3628 386 320 31 23 chr2 231121905 231122033 -22134550 + L2 LINE L2 2923 3051 -221 1988 218 95 8 chr2 231122086 231122581 -22134002 - MLT1F LTR MaLR -4 538 1 207 0 0 0 chr2 231122868 231122891 -22133692 + (A)n Simple_repeat Simple_repeat 1 23 0 746 114 9 0 chr2 231123635 231123740 -22132843 - AluSc SINE Alu -160 149 44 557 89 0 0 chr2 231124029 231124108 -22132475 - MADE1 DNA Mariner 0 80 2 610 277 98 0 chr2 231124593 231124777 -22131806 - MLT1I LTR MaLR -207 202 1 297 0 0 0 chr2 231125040 231125073 -22131510 + (TG)n Simple_repeat Simple_repeat 2 34 0 209 311 33 0 chr2 231125697 231125758 -22130825 + MIR SINE MIR 79 141 -121 234 344 10 21 chr2 231126601 231126697 -22129886 - L2 LINE L2 -5 3308 3214 283 244 23 0 chr2 231126733 231126819 -22129764 - L1ME2 LINE L1 -8 6156 6069 358 243 14 0 chr2 231126848 231126922 -22129661 + MER21B LTR ERV1 15 89 -774 1708 281 80 32 chr2 231126934 231127521 -22129062 + MER21B LTR ERV1 43 657 -206 305 304 33 0 chr2 231127672 231127764 -22128819 - L2 LINE L2 -25 3247 3153 273 119 0 0 chr2 231128117 231128159 -22128424 + (TA)n Simple_repeat Simple_repeat 1 42 0 2320 104 0 0 chr2 231128160 231128469 -22128114 - AluY SINE Alu -2 309 1 236 241 38 13 chr2 231129161 231129240 -22127343 + CT-rich Low_complexity Low_complexity 1 81 0 302 211 0 0 chr2 231129320 231129377 -22127206 - L1MC4 LINE L1 -1339 6703 6647 2064 125 50 36 chr2 231129479 231129838 -22126745 + THE1B LTR MaLR 1 364 0 1691 126 59 35 chr2 231129995 231130336 -22126247 + THE1C LTR MaLR 1 349 -26 190 329 143 38 chr2 231130415 231130652 -22125931 - MIR SINE MIR 0 262 1 1342 196 23 103 chr2 231131373 231131770 -22124813 + MLT1A1 LTR MaLR 1 365 0 218 205 0 0 chr2 231132998 231133037 -22123546 + (CATATA)n Simple_repeat Simple_repeat 5 43 0 714 329 12 8 chr2 231134159 231134408 -22122175 + MIR SINE MIR 10 259 -3 221 300 108 39 chr2 231134986 231135116 -22121467 + MER5A DNA MER1_type 7 145 -44 333 0 0 0 chr2 231135950 231135987 -22120596 + (TG)n Simple_repeat Simple_repeat 1 37 0 2254 100 3 0 chr2 231136040 231136341 -22120242 - AluSx SINE Alu -10 302 1 360 0 0 0 chr2 231136531 231136571 -22120012 + (CA)n Simple_repeat Simple_repeat 2 41 0 2228 152 59 17 chr2 231137783 231137999 -22118584 - MSTA LTR MaLR 0 428 222 2183 94 0 7 chr2 231137999 231138296 -22118287 - AluY SINE Alu -16 295 1 2228 152 59 17 chr2 231138296 231138488 -22118095 - MSTA LTR MaLR -206 222 3 266 286 57 29 chr2 231139053 231139158 -22117425 - MIR SINE MIR -125 137 30 302 291 0 0 chr2 231139205 231139284 -22117299 + MER117 DNA MER1_type 38 116 -81 1552 142 0 12 chr2 231139302 231139542 -22117041 + AluSx SINE Alu 1 237 -75 1832 93 25 96 chr2 231141326 231141649 -22114934 + AluSq SINE Alu 1 300 -13 357 316 86 38 chr2 231141664 231141977 -22114606 - L1ME3 LINE L1 -270 5892 5565 579 347 68 36 chr2 231142327 231142597 -22113986 - L1ME3 LINE L1 -941 5205 4945 1843 132 0 0 chr2 231142597 231142869 -22113714 + AluSg SINE Alu 39 310 0 579 347 68 36 chr2 231142869 231143397 -22113186 - L1ME3 LINE L1 -1201 4945 4382 457 302 92 27 chr2 231143542 231144019 -22112564 - L1ME3 LINE L1 -1983 4163 3656 213 121 0 0 chr2 231146759 231146792 -22109791 + (TG)n Simple_repeat Simple_repeat 2 34 0 1200 171 71 42 chr2 231146968 231147207 -22109376 - MLT1A1 LTR MaLR -5 360 115 394 260 96 0 chr2 231147214 231147318 -22109265 + MER81 DNA DNA 1 114 0 516 234 50 92 chr2 231147348 231147566 -22109017 - MER63A DNA MER1_type -1 209 1 246 317 19 29 chr2 231147566 231147670 -22108913 + MIR SINE MIR 158 260 -2 535 301 164 19 chr2 231149467 231149833 -22106750 - L2 LINE L2 -1 3312 2894 * 602 274 18 18 chr2 231149829 231149997 -22106586 - MER5B DNA MER1_type -10 168 1 814 217 50 0 chr2 231150007 231150187 -22106396 - MER5A DNA MER1_type 0 189 1 229 281 133 22 chr2 231150701 231150836 -22105747 - MER102a DNA MER1_type -3 327 178 1358 153 63 15 chr2 231151256 231151574 -22105009 - L1P LINE L1 -783 5363 5047 4847 118 16 3 chr2 231151576 231152319 -22104264 + L1PA16 LINE L1 5405 6157 -9 316 360 153 10 chr2 231152340 231152746 -22103837 + L3 LINE CR1 1113 1576 -1 301 293 23 8 chr2 231153020 231153153 -22103430 - MIR SINE MIR -10 252 118 1376 95 56 223 chr2 231154495 231154534 -22102049 - MER54B LTR ERVL -2 791 747 1057 29 29 0 chr2 231154534 231154673 -22101910 + (TTTC)n Simple_repeat Simple_repeat 2 144 0 1718 101 55 0 chr2 231154674 231154911 -22101672 - AluSg SINE Alu -32 278 29 1376 95 56 223 chr2 231154911 231155278 -22101305 - MER54B LTR ERVL -45 748 451 1377 143 102 0 chr2 231155286 231155531 -22101052 - MER54B LTR ERVL -523 270 1 786 283 45 33 chr2 231155616 231155948 -22100635 - MER102b DNA MER1_type -5 336 1 304 350 43 26 chr2 231155956 231156073 -22100510 + L2 LINE L2 3195 3313 0 255 286 78 65 chr2 231156420 231156637 -22099946 + HAL1 LINE L1 4 223 -2284 282 182 36 0 chr2 231156660 231156715 -22099868 + HAL1 LINE L1 2445 2501 -6 2175 110 10 0 chr2 231156978 231157270 -22099313 + AluSc SINE Alu 1 295 -14 311 210 0 99 chr2 231157891 231157972 -22098611 + L1MD2 LINE L1 6058 6130 -229 1301 181 20 4 chr2 231158074 231158323 -22098260 + L1MD2 LINE L1 6091 6343 -16 416 293 65 52 chr2 231158747 231159170 -22097413 + MLT1H LTR MaLR 51 539 -10 643 275 115 0 chr2 231159537 231159737 -22096846 - MER58A DNA MER1_type 0 224 2 313 346 26 0 chr2 231159816 231159969 -22096614 - MER117 DNA MER1_type -5 192 36 1554 162 75 39 chr2 231161405 231161763 -22094820 - THE1C LTR MaLR -4 371 1 1750 118 0 4 chr2 231162068 231162305 -22094278 + AluSc SINE Alu 56 291 -18 1558 93 5 0 chr2 231163392 231163597 -22092986 - AluSc SINE Alu -103 206 1 392 162 61 155 chr2 231163598 231163746 -22092837 + MER21B LTR ERV1 650 857 -74 1637 234 66 43 chr2 231163774 231164290 -22092293 - L1ME2 LINE L1 -93 6071 5539 1798 175 0 0 chr2 231164290 231164575 -22092008 - AluJb SINE Alu -11 301 17 1637 234 66 43 chr2 231164575 231164635 -22091948 - L1ME2 LINE L1 -625 5539 5482 * 1975 244 78 35 chr2 231164627 231165490 -22091093 - L1P LINE L1 -751 5410 4519 393 325 21 48 chr2 231165733 231166022 -22090561 - L1MEc LINE L1 -6090 306 26 228 35 0 0 chr2 231166084 231166113 -22090470 + (TG)n Simple_repeat Simple_repeat 2 30 0 2620 156 127 115 chr2 231167588 231168029 -22088554 - L1MC3 LINE L1 0 7785 7351 1836 172 0 14 chr2 231168029 231168326 -22088257 + AluSq SINE Alu 1 293 -20 2620 156 127 115 chr2 231168326 231168512 -22088071 - L1MC3 LINE L1 -434 7351 7169 252 197 0 84 chr2 231168512 231168583 -22088000 - MLT1F1 LTR MaLR -478 89 25 2620 156 127 115 chr2 231168583 231168780 -22087803 - L1MC3 LINE L1 -616 7169 6879 303 339 18 0 chr2 231169344 231169456 -22087127 + MIR3 SINE MIR 88 201 -7 188 173 73 24 chr2 231169529 231169593 -22086990 - MIR SINE MIR -114 94 29 898 67 0 8 chr2 231169595 231169715 -22086868 + Alu SINE Alu 180 298 -12 2453 42 0 3 chr2 231169723 231170062 -22086521 + AluY SINE Alu 1 338 0 592 156 9 37 chr2 231170114 231170333 -22086250 + CT-rich Low_complexity Low_complexity 1 213 0 502 139 35 17 chr2 231170447 231170562 -22086021 + CT-rich Low_complexity Low_complexity 4 120 0 575 276 112 90 chr2 231172264 231172808 -22083775 - L1ME4a LINE L1 -225 5896 5341 40 59 0 0 chr2 231172886 231172954 -22083629 + AT_rich Low_complexity Low_complexity 1 68 0 298 247 40 13 chr2 231173232 231173382 -22083201 + (TA)n Simple_repeat Simple_repeat 1 154 0 248 248 121 28 chr2 231173427 231173568 -22083015 - L1ME4a LINE L1 -1303 4843 4690 26 30 0 0 chr2 231173588 231173621 -22082962 + AT_rich Low_complexity Low_complexity 1 33 0 1497 220 52 6 chr2 231173636 231173981 -22082602 + MLT1A1 LTR MaLR 1 361 -4 13665 86 30 2 chr2 231174602 231177249 -22079334 + L1PA7 LINE L1 3466 6143 -11 446 352 0 6 chr2 231177346 231177508 -22079075 + MER117 DNA MER1_type 5 165 -32 1199 181 22 4 chr2 231177749 231177981 -22078602 - L1MC1 LINE L1 -5 6328 6093 2027 120 0 7 chr2 231178142 231178470 -22078113 + AluSg SINE Alu 1 326 0 37 39 0 0 chr2 231180127 231180178 -22076405 + AT_rich Low_complexity Low_complexity 1 51 0 188 197 0 16 chr2 231180288 231180349 -22076234 + (TA)n Simple_repeat Simple_repeat 2 61 0 225 65 0 0 chr2 231182226 231182257 -22074326 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 331 333 89 35 chr2 231182903 231183128 -22073455 + MIR SINE MIR 16 250 -12 2109 110 0 0 chr2 231183469 231183774 -22072809 + AluY SINE Alu 1 305 0 230 276 0 0 chr2 231183812 231183870 -22072713 + (TA)n Simple_repeat Simple_repeat 1 58 0 468 340 53 15 chr2 231184051 231184316 -22072267 + L2 LINE L2 1783 2057 -1257 186 306 35 24 chr2 231185003 231185088 -22071495 + L2 LINE L2 2559 2644 -670 204 67 0 0 chr2 231185266 231185296 -22071287 + (CTTG)n Simple_repeat Simple_repeat 3 32 0 1692 161 0 29 chr2 231185296 231185570 -22071013 - AluSx SINE Alu -46 266 1 22 0 0 0 chr2 231186796 231186818 -22069765 + AT_rich Low_complexity Low_complexity 1 22 0 363 88 78 39 chr2 231187468 231187570 -22069013 + GA-rich Low_complexity Low_complexity 5 110 0 191 268 0 0 chr2 231188604 231188645 -22067938 + L2 LINE L2 3264 3304 -9 2093 109 63 20 chr2 231190275 231190622 -22065961 - THE1B LTR MaLR -2 362 1 390 339 66 28 chr2 231191538 231191857 -22064726 - L2 LINE L2 -853 2461 2131 359 354 62 0 chr2 231192228 231192406 -22064177 - MIR SINE MIR -72 190 2 1827 228 43 36 chr2 231192510 231193079 -22063504 - L1ME1 LINE L1 -18 6148 5580 2376 92 3 0 chr2 231193162 231193457 -22063126 + AluSg SINE Alu 1 296 -14 21 0 0 0 chr2 231196266 231196287 -22060296 + AT_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr2 231196487 231196523 -22060060 + AT_rich Low_complexity Low_complexity 1 36 0 903 160 27 37 chr2 231199365 231199552 -22057031 + MER20 DNA MER1_type 31 215 -4 312 314 9 9 chr2 231200258 231200363 -22056220 - L1MC4 LINE L1 -1329 6713 6609 2590 111 26 55 chr2 231200754 231200884 -22055699 - MER65A LTR ERV1 0 445 313 2258 116 3 6 chr2 231200884 231201195 -22055388 + AluSx SINE Alu 2 311 -1 2590 111 26 55 chr2 231201195 231201522 -22055061 - MER65A LTR ERV1 -132 313 1 1758 182 79 34 chr2 231201666 231202202 -22054381 + MLT2A2 LTR ERVL 1 554 0 1890 196 22 6 chr2 231202240 231202598 -22053985 + MLT2D LTR ERVL 3 366 -48 1717 151 14 0 chr2 231202659 231202938 -22053645 + Tigger5 DNA MER2_type 2041 2323 0 408 40 0 0 chr2 231202941 231202991 -22053592 + (CA)n Simple_repeat Simple_repeat 2 51 0 787 289 103 39 chr2 231203220 231203826 -22052757 + L1ME3 LINE L1 2350 3039 -3107 2180 105 7 0 chr2 231203826 231204121 -22052462 + AluSc SINE Alu 1 297 -12 787 289 103 39 chr2 231204121 231204450 -22052133 + L1ME3 LINE L1 3039 3345 -2801 1609 260 91 48 chr2 231204674 231205953 -22050630 + L1ME3 LINE L1 4442 5815 -347 1963 150 10 3 chr2 231205953 231206259 -22050324 + AluJo SINE Alu 1 308 -4 1609 260 91 48 chr2 231206259 231206612 -22049971 + L1ME3 LINE L1 5815 6151 -11 1159 77 0 0 chr2 231206616 231206772 -22049811 + L1PA8 LINE L1 6017 6172 0 189 132 0 0 chr2 231206786 231206824 -22049759 + (CAAAAA)n Simple_repeat Simple_repeat 2 39 0 536 308 93 9 chr2 231206832 231207046 -22049537 + MIR SINE MIR 29 260 -2 709 209 90 0 chr2 231207646 231207780 -22048803 + FRAM SINE Alu 1 146 -30 1997 148 0 0 chr2 231208135 231208432 -22048151 + AluSx SINE Alu 1 297 -15 473 47 16 0 chr2 231208449 231208513 -22048070 + (GAA)n Simple_repeat Simple_repeat 2 66 0 1541 225 117 29 chr2 231208568 231209056 -22047527 + MER21B LTR ERV1 333 863 0 1423 147 22 0 chr2 231209647 231209879 -22046704 + MER75 DNA T2_type 14 250 -264 843 128 0 8 chr2 231209882 231209999 -22046584 + FLAM_C SINE Alu 5 120 -23 1696 105 3 57 chr2 231210025 231210234 -22046349 + MER75 DNA T2_type 235 454 -60 2476 118 13 5 chr2 231210234 231210606 -22045977 - THE1C LTR MaLR 0 375 1 1696 105 3 57 chr2 231210606 231210661 -22045922 + MER75 DNA T2_type 454 484 -30 1667 114 0 9 chr2 231210661 231210888 -22045695 - AluSg/x SINE Alu -17 293 69 1696 105 3 57 chr2 231210888 231210918 -22045665 + MER75 DNA T2_type 484 514 0 334 237 65 0 chr2 231211199 231211292 -22045291 - LTR67 LTR ERVL -21 536 438 203 255 0 0 chr2 231211739 231211790 -22044793 + (CATA)n Simple_repeat Simple_repeat 2 52 0 435 38 0 0 chr2 231212428 231212481 -22044102 + (TA)n Simple_repeat Simple_repeat 2 54 0 2282 102 7 0 chr2 231214086 231214391 -22042192 - AluSx SINE Alu -5 307 1 908 186 35 0 chr2 231214559 231214731 -22041852 - MER5B DNA MER1_type 0 178 1 22 0 0 0 chr2 231215168 231215190 -22041393 + AT_rich Low_complexity Low_complexity 1 22 0 290 266 68 93 chr2 231215288 231215333 -22041250 - MLT1K LTR MaLR -28 560 515 1882 143 37 50 chr2 231215333 231215711 -22040872 - THE1C LTR MaLR 0 375 3 290 266 68 93 chr2 231215711 231215768 -22040815 - MLT1K LTR MaLR -73 515 458 2270 64 0 45 chr2 231215768 231216082 -22040501 + AluY SINE Alu 1 300 -11 290 266 68 93 chr2 231216082 231216215 -22040368 - MLT1K LTR MaLR -130 458 330 352 298 97 0 chr2 231216335 231216449 -22040134 - MLT1K LTR MaLR -342 246 122 234 284 213 57 chr2 231216554 231216695 -22039888 + MIR3 SINE MIR 32 194 -14 2466 45 0 0 chr2 231216777 231217064 -22039519 + AluY SINE Alu 1 287 -24 180 188 47 0 chr2 231219211 231219275 -22037308 + (TATATG)n Simple_repeat Simple_repeat 5 71 0 21 36 0 0 chr2 231219275 231219303 -22037280 + AT_rich Low_complexity Low_complexity 1 28 0 236 229 0 72 chr2 231220085 231220168 -22036415 + CT-rich Low_complexity Low_complexity 4 80 0 2253 66 0 49 chr2 231221774 231222108 -22034475 - AluY SINE Alu 0 311 1 1222 222 23 80 chr2 231223802 231224189 -22032394 + MLT1A1 LTR MaLR 1 365 0 30 0 0 0 chr2 231224360 231224390 -22032193 + AT_rich Low_complexity Low_complexity 1 30 0 351 278 83 0 chr2 231224977 231225085 -22031498 + L2 LINE L2 3197 3313 0 312 48 0 0 chr2 231225323 231225365 -22031218 + (CA)n Simple_repeat Simple_repeat 2 43 0 2477 62 0 10 chr2 231225607 231225915 -22030668 + AluY SINE Alu 1 305 -6 194 308 81 76 chr2 231226001 231226186 -22030397 + MER5A DNA MER1_type 4 189 0 2158 102 0 45 chr2 231226894 231227207 -22029376 + AluSx SINE Alu 1 299 -13 567 284 149 63 chr2 231227897 231228359 -22028224 - L1ME4a LINE L1 -37 6084 5583 2289 130 39 14 chr2 231228929 231229284 -22027299 - THE1B LTR MaLR 0 364 1 1941 151 118 44 chr2 231230399 231230774 -22025809 + MLT2C2 LTR ERVL 1 414 -50 268 64 43 0 chr2 231230774 231230821 -22025762 + (TG)n Simple_repeat Simple_repeat 2 50 0 1941 151 118 44 chr2 231230821 231230877 -22025706 + MLT2C2 LTR ERVL 414 464 0 992 179 61 54 chr2 231231763 231232221 -22024362 - LTR56 LTR ERV1 -7 569 3 1345 167 10 80 chr2 231232253 231232553 -22024030 - AluJo SINE Alu -33 279 1 310 279 25 0 chr2 231232776 231232855 -22023728 + MER81 DNA DNA 30 110 -4 321 245 21 21 chr2 231233632 231233726 -22022857 - L1MC4 LINE L1 -1337 6705 6612 200 59 29 0 chr2 231233726 231233760 -22022823 + (TTATA)n Simple_repeat Simple_repeat 5 39 0 1823 171 23 3 chr2 231234288 231234702 -22021881 - AluJb SINE Alu 0 420 1 516 246 199 0 chr2 231234732 231234943 -22021640 - MER5C DNA MER1_type -68 256 4 180 0 0 0 chr2 231235109 231235129 -22021454 + (CA)n Simple_repeat Simple_repeat 1 20 0 858 344 90 17 chr2 231236483 231237295 -22019288 + L2 LINE L2 2432 3306 -7 229 288 68 30 chr2 231239426 231239558 -22017025 - L2 LINE L2 -195 3118 2982 1874 133 6 50 chr2 231239584 231239906 -22016677 + AluSg SINE Alu 1 308 -2 299 243 11 124 chr2 231239928 231240113 -22016470 + MER20B DNA MER1_type 7 170 -613 197 31 94 0 chr2 231240563 231240595 -22015988 + A-rich Low_complexity Low_complexity 3 37 0 226 186 23 0 chr2 231240748 231240834 -22015749 + (TA)n Simple_repeat Simple_repeat 2 89 0 1874 144 14 3 chr2 231240835 231241120 -22015463 - AluSx SINE Alu -24 288 1 206 222 0 0 chr2 231242960 231242996 -22013587 + MIR SINE MIR 217 252 -10 23 33 0 0 chr2 231243030 231243060 -22013523 + AT_rich Low_complexity Low_complexity 1 30 0 293 313 114 24 chr2 231244811 231244977 -22011606 - MER5A DNA MER1_type -1 188 8 2248 72 0 65 chr2 231246426 231246747 -22009836 + AluSc SINE Alu 1 300 -9 2077 115 3 10 chr2 231246765 231247077 -22009506 + AluSx SINE Alu 1 310 -2 24 0 0 0 chr2 231247103 231247127 -22009456 + AT_rich Low_complexity Low_complexity 1 24 0 180 111 0 0 chr2 231249108 231249135 -22007448 + (T)n Simple_repeat Simple_repeat 1 27 0 312 221 29 19 chr2 231249514 231249618 -22006965 + (TA)n Simple_repeat Simple_repeat 2 106 0 599 291 64 42 chr2 231249898 231250351 -22006232 + MLT1K LTR MaLR 126 588 0 313 268 122 67 chr2 231250369 231250533 -22006050 - MIR SINE MIR -72 190 18 21 36 0 0 chr2 231250606 231250634 -22005949 + AT_rich Low_complexity Low_complexity 1 28 0 521 265 20 13 chr2 231250763 231250914 -22005669 - MIR SINE MIR -48 214 63 812 137 6 48 chr2 231251118 231251286 -22005297 + L1MA5A LINE L1 6133 6293 -4 880 128 15 8 chr2 231252512 231252645 -22003938 - AluJo SINE Alu -178 134 1 230 294 70 51 chr2 231253928 231254244 -22002339 - HsTC2 DNA Tc2 -1063 835 514 1386 235 62 81 chr2 231255156 231255709 -22000874 - MLT1F LTR MaLR 0 542 1 192 255 97 83 chr2 231255735 231255880 -22000703 + L3 LINE CR1 1167 1313 -264 1661 151 67 27 chr2 231255968 231256267 -22000316 - AluSx SINE Alu -1 311 1 387 0 0 0 chr2 231256365 231256408 -22000175 + (AATAG)n Simple_repeat Simple_repeat 4 46 0 301 216 95 0 chr2 231257646 231257720 -21998863 + MIR SINE MIR 5 85 -177 1793 115 55 78 chr2 231258462 231258504 -21998079 + THE1C LTR MaLR 1 42 -333 2046 106 11 0 chr2 231258504 231258814 -21997769 - AluSc SINE Alu 0 313 1 1793 115 55 78 chr2 231258814 231259154 -21997429 + THE1C LTR MaLR 42 375 0 276 111 67 0 chr2 231259261 231259351 -21997232 + (TA)n Simple_repeat Simple_repeat 2 97 0 2414 90 3 0 chr2 231259437 231259747 -21996836 - AluY SINE Alu 0 311 1 204 440 28 0 chr2 231261176 231261317 -21995266 - MIR3 SINE MIR -48 160 16 201 156 0 0 chr2 231263044 231263076 -21993507 + (TATG)n Simple_repeat Simple_repeat 4 35 0 701 241 0 38 chr2 231263151 231263309 -21993274 - FRAM SINE Alu -25 151 1 2559 161 9 9 chr2 231263431 231263859 -21992724 - MSTA LTR MaLR 0 428 1 299 318 116 17 chr2 231265846 231266019 -21990564 + MIR3 SINE MIR 15 204 -4 1611 187 7 27 chr2 231266056 231266350 -21990233 + AluJb SINE Alu 1 288 -24 491 370 37 5 chr2 231266611 231266827 -21989756 - MIR SINE MIR -28 234 12 214 286 0 0 chr2 231266857 231266906 -21989677 + (CATATA)n Simple_repeat Simple_repeat 1 49 0 2702 110 0 3 chr2 231267074 231267439 -21989144 - THE1B LTR MaLR 0 364 1 10044 113 31 38 chr2 231267441 231269030 -21987553 - THE1B-int LTR MaLR -2 1578 1 2247 134 3 27 chr2 231269030 231269130 -21987453 - THE1B LTR MaLR 0 364 263 2023 137 76 15 chr2 231269130 231269473 -21987110 - THE1B LTR MaLR 0 364 1 11465 102 8 6 chr2 231269473 231271050 -21985533 - THE1B-int LTR MaLR 0 1580 1 2048 136 72 17 chr2 231271050 231271395 -21985188 - THE1B LTR MaLR 0 364 1 2247 134 3 27 chr2 231271395 231271665 -21984918 - THE1B LTR MaLR -98 266 1 469 265 126 18 chr2 231273663 231273886 -21982697 - MLT1K LTR MaLR -22 566 320 2412 262 67 15 chr2 231273894 231274836 -21981747 + Zaphod DNA AcHobo 10 1000 -3031 546 263 32 23 chr2 231274840 231275057 -21981526 + Zaphod DNA AcHobo 3813 4031 0 2107 86 11 0 chr2 231276688 231276957 -21979626 - AluSp SINE Alu -13 300 29 252 0 0 0 chr2 231278345 231278373 -21978210 + (CA)n Simple_repeat Simple_repeat 2 29 0 195 139 0 0 chr2 231278374 231278410 -21978173 + (CCA)n Simple_repeat Simple_repeat 1 36 0 744 319 176 27 chr2 231280056 231280633 -21975950 + L2 LINE L2 2614 3265 -48 216 0 0 0 chr2 231280786 231280810 -21975773 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 684 201 7 0 chr2 231280875 231281014 -21975569 - MLT1B LTR MaLR 0 390 251 198 395 106 16 chr2 231281406 231281831 -21974752 - L2 LINE L2 -342 2972 2510 273 256 23 70 chr2 231282020 231282149 -21974434 - MIR SINE MIR -69 193 71 192 77 0 0 chr2 231282200 231282226 -21974357 + (TAA)n Simple_repeat Simple_repeat 2 27 0 316 198 129 30 chr2 231282241 231282342 -21974241 + L1M LINE L1 5317 5427 -932 180 0 0 0 chr2 231282903 231282923 -21973660 + (T)n Simple_repeat Simple_repeat 1 20 0 1410 217 84 105 chr2 231283020 231283186 -21973397 + LTR1B LTR ERV1 1 169 -851 1595 74 23 5 chr2 231283186 231283403 -21973180 + AluSc SINE Alu 57 277 -32 198 24 24 49 chr2 231283404 231283445 -21973138 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 1410 217 84 105 chr2 231283445 231284235 -21972348 + LTR1B LTR ERV1 168 1020 0 2016 135 49 18 chr2 231285184 231285511 -21971072 - MER1B DNA MER1_type 0 337 1 425 192 250 32 chr2 231285777 231285933 -21970650 - MER106A DNA MER1_type -46 190 1 2059 113 0 17 chr2 231286662 231286955 -21969628 + AluSg1 SINE Alu 1 288 -21 451 260 187 26 chr2 231287782 231288055 -21968528 - MLT1L LTR MaLR -88 527 211 216 333 121 8 chr2 231288799 231288931 -21967652 + L2 LINE L2 2330 2476 -838 191 219 0 94 chr2 231289457 231289521 -21967062 - MIR SINE MIR -164 98 41 216 0 0 0 chr2 231289892 231289916 -21966667 + (TA)n Simple_repeat Simple_repeat 2 25 0 2422 84 0 0 chr2 231289916 231290213 -21966370 - AluY SINE Alu -14 297 1 1903 160 13 19 chr2 231290501 231290808 -21965775 - AluJo SINE Alu -7 305 1 2168 125 0 0 chr2 231294270 231294566 -21962017 - AluSx SINE Alu -16 296 1 806 239 11 11 chr2 231296075 231296251 -21960332 - MER45A DNA AcHobo -2 176 1 2404 125 5 19 chr2 231296922 231297291 -21959292 + THE1B LTR MaLR 1 364 0 410 92 0 15 chr2 231297296 231297361 -21959222 + (TAGA)n Simple_repeat Simple_repeat 4 67 0 219 125 0 0 chr2 231297409 231297449 -21959134 + (TCC)n Simple_repeat Simple_repeat 2 41 0 363 281 140 50 chr2 231297487 231297708 -21958875 - MLT1K LTR MaLR -202 386 146 237 293 13 0 chr2 231297681 231297756 -21958827 - MLT1K LTR MaLR -347 241 166 * 268 265 133 0 chr2 231300421 231300504 -21956079 + MIR SINE MIR 73 166 -96 373 284 37 132 chr2 231300578 231300905 -21955678 + L2 LINE L2 2968 3263 -9 1027 255 103 3 chr2 231300919 231301248 -21955335 - MER89 LTR ERV1 0 559 198 309 188 0 0 chr2 231301222 231301286 -21955297 - MER89 LTR ERV1 -470 89 26 * 25 90 0 0 chr2 231302333 231302400 -21954183 + AT_rich Low_complexity Low_complexity 1 67 0 452 293 61 20 chr2 231302655 231302802 -21953781 + MIR SINE MIR 14 166 -96 294 29 0 0 chr2 231302914 231302949 -21953634 + (TG)n Simple_repeat Simple_repeat 2 36 0 455 252 150 19 chr2 231303839 231304050 -21952533 + L1MEc LINE L1 1048 1280 -5262 3108 124 74 17 chr2 231304209 231304733 -21951850 - MER41C LTR ERV1 0 554 1 318 313 40 66 chr2 231305078 231305276 -21951307 - L1ME LINE L1 -5838 232 40 591 228 209 38 chr2 231305303 231305566 -21951017 + L1ME LINE L1 5480 5787 -383 1068 196 241 5 chr2 231305597 231305959 -21950624 + MLT2B1 LTR ERVL 2 526 -28 447 19 0 0 chr2 231305959 231306011 -21950572 + (CA)n Simple_repeat Simple_repeat 1 52 0 1068 196 241 5 chr2 231306011 231306033 -21950550 + MLT2B1 LTR ERVL 526 542 -12 627 179 12 151 chr2 231307123 231307374 -21949209 - L1MC4 LINE L1 -14 8028 7813 1889 233 281 33 chr2 231307425 231308363 -21948220 - L1MD3 LINE L1 -209 7786 6524 649 276 29 6 chr2 231310319 231310493 -21946090 - MIR SINE MIR 0 262 85 1231 165 19 79 chr2 231310500 231310767 -21945816 - MLT1B LTR MaLR -3 387 137 915 242 0 0 chr2 231310797 231310995 -21945588 + MLT1B LTR MaLR 193 390 0 592 179 16 41 chr2 231310998 231311019 -21945564 - MLT1B LTR MaLR -347 120 100 2823 106 38 14 chr2 231311019 231311038 -21945545 - MER57B LTR ERV1 0 434 417 1957 141 0 3 chr2 231311038 231311361 -21945222 + AluSg SINE Alu 1 310 0 2823 106 38 14 chr2 231311361 231311765 -21944818 - MER57B LTR ERV1 -17 417 1 592 179 16 41 chr2 231311765 231311866 -21944717 - MLT1B LTR MaLR -367 100 1 352 293 0 0 chr2 231311868 231311950 -21944633 - MIR SINE MIR -179 83 2 225 167 0 0 chr2 231311974 231312010 -21944573 - L2 LINE L2 -8 3305 3270 222 233 0 0 chr2 231312307 231312350 -21944233 + L2 LINE L2 3264 3306 -7 2288 83 3 3 chr2 231312772 231313062 -21943521 + AluSp SINE Alu 3 292 -21 219 311 41 49 chr2 231313567 231313689 -21942894 + L2 LINE L2 3184 3304 -9 186 191 0 0 chr2 231313696 231313738 -21942845 + GA-rich Low_complexity Low_complexity 4 45 0 1839 160 7 0 chr2 231313965 231314298 -21942285 + AluSx SINE Alu 1 335 0 1379 255 190 20 chr2 231314888 231315393 -21941190 + MLT1G1 LTR MaLR 3 593 -2 2009 208 78 27 chr2 231315471 231315947 -21940636 + MLT1D LTR MaLR 1 500 -5 2462 43 7 10 chr2 231316481 231316781 -21939802 - AluY SINE Alu -12 299 1 263 333 30 0 chr2 231316909 231317008 -21939575 + L1ME LINE L1 5536 5637 -484 437 75 0 15 chr2 231317348 231317415 -21939168 + (TA)n Simple_repeat Simple_repeat 1 66 0 660 201 50 28 chr2 231317903 231318082 -21938501 - Charlie1a DNA MER1_type -1 1454 1272 1304 251 90 28 chr2 231318130 231318529 -21938054 + MLT1C LTR MaLR 44 467 0 * 2793 210 38 16 chr2 231318529 231319222 -21937361 - Charlie1a DNA MER1_type -179 1276 569 2022 200 115 32 chr2 231319220 231319715 -21936868 - Charlie1a DNA MER1_type -919 536 1 * 205 373 27 18 chr2 231319715 231319825 -21936758 - L2 LINE L2 -504 2810 2700 791 312 35 20 chr2 231319825 231320171 -21936412 - L2 LINE L2 -849 2465 2115 427 121 231 11 chr2 231320298 231320312 -21936271 - L1MA10 LINE L1 -9 6325 6312 541 247 99 6 chr2 231320312 231320474 -21936109 - L1ME1 LINE L1 -30 6136 5960 290 344 69 8 chr2 231320521 231320652 -21935931 - MIR3 SINE MIR -41 167 29 1168 303 51 17 chr2 231321090 231321562 -21935021 - LTR16C LTR ERVL 0 491 4 217 329 176 0 chr2 231321667 231321752 -21934831 + L2 LINE L2 3197 3296 -17 646 343 8 4 chr2 231321822 231322058 -21934525 + MIR SINE MIR 3 239 -23 2071 264 66 14 chr2 231323537 231324094 -21932489 - MLT1E LTR MaLR 0 593 8 25 0 0 0 chr2 231324515 231324540 -21932043 + AT_rich Low_complexity Low_complexity 1 25 0 485 294 44 11 chr2 231327079 231327259 -21929324 + MIR3 SINE MIR 17 202 -6 305 330 37 0 chr2 231328361 231328470 -21928113 + MIR SINE MIR 30 142 -66 332 333 43 8 chr2 231329554 231329671 -21926912 + MER5A DNA MER1_type 68 188 -1 333 253 0 0 chr2 231330502 231330585 -21925998 + MER103 DNA DNA 20 102 -64 416 358 95 5 chr2 231330594 231330815 -21925768 + MIR SINE MIR 8 248 -14 180 77 0 0 chr2 231330824 231330850 -21925733 + (CAAAAA)n Simple_repeat Simple_repeat 2 27 0 391 253 25 144 chr2 231331183 231331385 -21925198 - MER5B DNA MER1_type 0 178 1 378 91 0 0 chr2 231331725 231331780 -21924803 + (ATG)n Simple_repeat Simple_repeat 3 57 0 2433 57 3 7 chr2 231332059 231332357 -21924226 + AluY SINE Alu 1 297 -14 297 0 0 0 chr2 231332406 231332439 -21924144 + (CA)n Simple_repeat Simple_repeat 2 34 0 21 57 0 0 chr2 231333823 231333858 -21922725 + AT_rich Low_complexity Low_complexity 1 35 0 255 142 57 0 chr2 231335255 231335361 -21921222 + (TA)n Simple_repeat Simple_repeat 2 113 0 1827 171 0 0 chr2 231335449 231335730 -21920853 + AluJo SINE Alu 1 281 -31 1609 195 25 46 chr2 231335951 231336345 -21920238 + MLT1B LTR MaLR 1 386 -4 1497 172 172 0 chr2 231336870 231337167 -21919416 - MER7A DNA MER2_type 0 346 1 497 237 32 51 chr2 231337643 231337799 -21918784 - MER5B DNA MER1_type -25 153 1 232 233 0 0 chr2 231338959 231339002 -21917581 + polypyrimidine Low_complexity Low_complexity 2 44 0 586 140 21 0 chr2 231339923 231340016 -21916567 - 7SLRNA srpRNA srpRNA -27 293 199 2554 71 0 0 chr2 231340813 231341124 -21915459 + AluY SINE Alu 1 311 0 614 241 148 0 chr2 231342470 231342632 -21913951 - MER5A DNA MER1_type 0 189 4 1793 188 0 16 chr2 231343465 231343774 -21912809 - AluJo SINE Alu -1 311 8 2326 97 7 0 chr2 231344117 231344417 -21912166 - AluSx SINE Alu -10 302 1 22 0 0 0 chr2 231347504 231347526 -21909057 + AT_rich Low_complexity Low_complexity 1 22 0 1313 243 76 40 chr2 231347542 231347889 -21908694 - LTR33 LTR ERVL -1 520 148 1803 169 0 10 chr2 231347889 231348211 -21908372 - AluJb SINE Alu 0 312 3 1313 243 76 40 chr2 231348211 231348365 -21908218 - LTR33 LTR ERVL -373 148 1 1265 152 4 37 chr2 231348383 231348627 -21907956 + L1MB5 LINE L1 5931 6166 -8 192 286 0 18 chr2 231349486 231349542 -21907041 + MIR3 SINE MIR 145 199 -9 387 289 47 8 chr2 231349553 231349681 -21906902 - MIR SINE MIR -40 222 90 25 31 0 0 chr2 231350373 231350405 -21906178 + AT_rich Low_complexity Low_complexity 1 32 0 323 271 226 13 chr2 231351580 231351735 -21904848 + MER5A DNA MER1_type 2 189 0 379 352 84 5 chr2 231351809 231352022 -21904561 - MIR SINE MIR -27 235 6 791 314 42 22 chr2 231352069 231352473 -21904110 + MER113 DNA MER1_type? 110 521 0 243 327 88 44 chr2 231353401 231353560 -21903023 + MER5B DNA MER1_type 4 169 -9 761 136 0 0 chr2 231353751 231353861 -21902722 + MSTA LTR MaLR 1 110 -318 1963 151 70 33 chr2 231353872 231354393 -21902190 + MLT2A2 LTR ERVL 1 554 0 1191 170 83 12 chr2 231354406 231354647 -21901936 + MSTA LTR MaLR 171 428 0 194 348 44 44 chr2 231355631 231355789 -21900794 + MIR SINE MIR 20 177 -85 579 260 98 70 chr2 231356370 231356807 -21899776 + MLT1H LTR MaLR 39 549 0 443 286 126 19 chr2 231357254 231357480 -21899103 + L2 LINE L2 2193 2454 -860 4380 114 15 46 chr2 231357480 231358193 -21898390 + LTR8 LTR ERV1 1 691 0 443 286 126 19 chr2 231358193 231358235 -21898348 + L2 LINE L2 2454 2490 -824 2557 194 39 0 chr2 231358916 231359410 -21897173 - MLT2B1 LTR ERVL -7 513 1 442 141 0 13 chr2 231360320 231360398 -21896185 + Tigger2a DNA MER2_type 1 77 -357 804 251 15 20 chr2 231360405 231360600 -21895983 - MER8 DNA MER2_type -45 194 1 1863 266 36 29 chr2 231360797 231361383 -21895200 - MLT1E LTR MaLR -3 590 1 325 315 42 48 chr2 231361487 231361652 -21894931 + MIR SINE MIR 5 168 -94 288 156 33 67 chr2 231361679 231361769 -21894814 + MIR SINE MIR 141 227 -35 2294 109 3 0 chr2 231362905 231363209 -21893374 - AluSx SINE Alu -7 305 1 180 0 0 0 chr2 231363263 231363283 -21893300 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 277 222 28 19 chr2 231363330 231363438 -21893145 + (CATATA)n Simple_repeat Simple_repeat 1 109 0 293 366 54 23 chr2 231364029 231364250 -21892333 + MIR SINE MIR 35 262 0 463 324 68 36 chr2 231364390 231364640 -21891943 + MIR SINE MIR 3 260 -2 1899 137 0 34 chr2 231364849 231365173 -21891410 + AluSx SINE Alu 1 314 0 449 350 112 40 chr2 231365369 231365990 -21890593 - L2 LINE L2 -92 3221 2563 5621 205 8 10 chr2 231366003 231367339 -21889244 - L1 LINE L1 -1623 4523 3191 284 83 0 0 chr2 231367338 231367386 -21889197 + L1PB1 LINE L1 6104 6151 0 * 247 287 55 73 chr2 231367598 231367762 -21888821 - L2 LINE L2 -775 2539 2379 439 272 168 12 chr2 231368069 231368242 -21888341 - MIR SINE MIR -7 255 56 564 227 0 0 chr2 231368540 231368672 -21887911 - L1P LINE L1 -2699 3447 3316 1692 152 160 11 chr2 231369176 231369538 -21887045 - MSTA LTR MaLR -12 416 1 2824 7 0 0 chr2 231369725 231370029 -21886554 - AluYa5 SINE Alu -7 304 1 6987 40 21 1 chr2 231370757 231371832 -21884751 + L1PA5 LINE L1 5044 6135 -19 390 21 0 0 chr2 231371832 231371879 -21884704 + (TA)n Simple_repeat Simple_repeat 1 47 0 389 152 101 0 chr2 231372801 231372900 -21883683 + MER53 DNA DNA 81 189 0 1986 148 3 0 chr2 231373707 231374004 -21882579 + AluSq SINE Alu 1 298 -15 366 303 63 54 chr2 231374585 231374768 -21881815 - MIR3 SINE MIR -10 198 14 22 35 0 0 chr2 231375645 231375674 -21880909 + AT_rich Low_complexity Low_complexity 1 29 0 2020 138 20 0 chr2 231376787 231377083 -21879500 - AluSx SINE Alu -10 302 1 288 356 40 0 chr2 231377084 231377185 -21879398 + MIR3 SINE MIR 101 205 -3 2419 107 0 0 chr2 231377242 231377550 -21879033 - AluSx SINE Alu -4 308 1 324 350 7 7 chr2 231377554 231377691 -21878892 + MIR3 SINE MIR 68 204 -4 1440 224 28 31 chr2 231379227 231379616 -21876967 + MLT1B LTR MaLR 3 390 0 24 32 0 0 chr2 231380831 231380862 -21875721 + AT_rich Low_complexity Low_complexity 1 31 0 461 319 133 47 chr2 231381453 231381860 -21874723 + L1MC4a LINE L1 5343 5784 -2024 473 293 53 0 chr2 231382084 231382234 -21874349 + MER5A DNA MER1_type 1 158 -31 314 284 60 9 chr2 231382132 231382248 -21874335 - MER5A DNA MER1_type -40 149 28 * 1509 228 77 33 chr2 231382315 231382858 -21873725 + L1MC4a LINE L1 6855 7421 -387 572 246 58 5 chr2 231382891 231383082 -21873501 + L1MD3 LINE L1 7758 7958 -37 185 268 0 0 chr2 231383875 231383916 -21872667 + MIR SINE MIR 222 262 0 286 279 0 58 chr2 231384264 231384350 -21872233 + MER5A DNA MER1_type 33 113 -76 235 366 9 18 chr2 231384397 231384509 -21872074 - MIR SINE MIR -60 148 38 324 319 176 19 chr2 231384524 231384740 -21871843 - MIR SINE MIR 0 262 13 1961 172 0 0 chr2 231384972 231385275 -21871308 + AluJo SINE Alu 2 304 -8 368 278 37 19 chr2 231385642 231385750 -21870833 + MER5A DNA MER1_type 3 112 -77 748 244 23 4 chr2 231385834 231386020 -21870563 + MER5A DNA MER1_type 1 177 -1 245 296 12 37 chr2 231386020 231386068 -21870515 + MER5B DNA MER1_type 39 84 -94 265 294 159 32 chr2 231386088 231386214 -21870369 - MER5B DNA MER1_type 0 178 37 3776 293 54 43 chr2 231386222 231387130 -21869453 + L2 LINE L2 812 1749 -1565 2170 108 7 3 chr2 231387130 231387426 -21869157 - AluSx SINE Alu -15 297 1 3776 293 54 43 chr2 231387426 231388227 -21868356 + L2 LINE L2 1749 2540 -774 265 273 23 57 chr2 231388317 231388405 -21868178 + MIR SINE MIR 45 129 -79 338 202 0 22 chr2 231388414 231388503 -21868080 + (TATG)n Simple_repeat Simple_repeat 1 87 0 1199 282 69 22 chr2 231388509 231389015 -21867568 + L2 LINE L2 2531 3058 -255 484 269 50 0 chr2 231389025 231389166 -21867417 - MER63A DNA MER1_type -10 200 53 227 30 0 30 chr2 231389174 231389207 -21867376 + (TTAA)n Simple_repeat Simple_repeat 2 33 0 918 244 56 38 chr2 231389335 231389654 -21866929 + L1M4 LINE L1 3699 4023 -2123 523 125 31 23 chr2 231389657 231389785 -21866798 - L1MA2 LINE L1 -244 6060 5932 1187 90 6 6 chr2 231389785 231389951 -21866632 + L1MA2 LINE L1 6128 6304 0 1451 215 133 5 chr2 231391227 231391632 -21864951 + MLT2B1 LTR ERVL 8 464 -56 1875 136 28 9 chr2 231391657 231391980 -21864603 - Tigger7 DNA MER2_type 0 2587 2259 1311 132 21 0 chr2 231392745 231392934 -21863649 + AluJo SINE Alu 87 279 -33 3828 159 19 1 chr2 231393614 231394777 -21861806 + L1M2 LINE L1 4599 5779 -512 184 340 0 0 chr2 231395806 231395853 -21860730 - L2 LINE L2 -38 3234 3188 306 290 70 59 chr2 231395941 231396127 -21860456 - L2 LINE L2 -188 3084 2897 201 196 0 0 chr2 231397361 231397407 -21859176 + CT-rich Low_complexity Low_complexity 3 48 0 301 103 21 0 chr2 231397556 231397616 -21858967 - Alu SINE Alu -255 45 1 308 206 0 0 chr2 231397624 231397697 -21858886 - HAL1 LINE L1 -1327 1180 1108 301 283 9 38 chr2 231397697 231397803 -21858780 - L1M4 LINE L1 -3757 2389 2287 32 43 0 0 chr2 231399142 231399188 -21857395 + AT_rich Low_complexity Low_complexity 1 46 0 3175 182 9 2 chr2 231400409 231400987 -21855596 - Tigger6a DNA MER2_type -500 583 2 22 0 0 0 chr2 231401381 231401403 -21855180 + AT_rich Low_complexity Low_complexity 1 22 0 1761 170 32 11 chr2 231402113 231402484 -21854099 + L1MA8 LINE L1 5866 6244 -47 340 228 86 98 chr2 231402863 231403118 -21853465 + MER112 DNA MER1_type 2 253 -3 180 0 0 0 chr2 231403151 231403171 -21853412 + (TC)n Simple_repeat Simple_repeat 2 21 0 231 36 0 0 chr2 231404935 231404963 -21851620 + (T)n Simple_repeat Simple_repeat 1 28 0 232 294 0 0 chr2 231405553 231405621 -21850962 + L2 LINE L2 3204 3271 -1 946 83 6 107 chr2 231405775 231405943 -21850640 + AluSc SINE Alu 79 229 -80 287 353 52 60 chr2 231406044 231406313 -21850270 - L2 LINE L2 -200 3072 2806 184 410 74 0 chr2 231407251 231407346 -21849237 - L2 LINE L2 -199 3073 2972 765 285 140 20 chr2 231407468 231407861 -21848722 - L2 LINE L2 -618 2696 2257 229 282 18 18 chr2 231408440 231408550 -21848033 + HAL1b LINE L1 1227 1336 -12 283 322 35 17 chr2 231408737 231408852 -21847731 - L2 LINE L2 0 3272 3156 710 105 35 0 chr2 231408889 231409003 -21847580 - MLT1B LTR MaLR 0 390 273 2351 100 14 19 chr2 231410242 231410612 -21845971 - L1PBa LINE L1 -5858 1005 638 1080 160 0 0 chr2 231410616 231410816 -21845767 - L1PBa LINE L1 -6663 200 1 2184 110 37 29 chr2 231410827 231411201 -21845382 + Tigger2a DNA MER2_type 16 392 -42 489 287 161 11 chr2 231411207 231411381 -21845202 + MIR SINE MIR 13 212 -50 206 276 40 40 chr2 231411531 231411607 -21844976 - L2 LINE L2 -2 3311 3236 3634 198 17 4 chr2 231413004 231413816 -21842767 + L1 LINE L1 4552 5374 -772 217 174 29 29 chr2 231414067 231414136 -21842447 + (TA)n Simple_repeat Simple_repeat 2 70 0 423 339 90 66 chr2 231414148 231415100 -21841483 + L2 LINE L2 2003 2977 -337 338 294 11 0 chr2 231415470 231415562 -21841021 + L3 LINE CR1 914 1006 -571 228 67 0 0 chr2 231415770 231415800 -21840783 + (TA)n Simple_repeat Simple_repeat 1 30 0 1033 157 8 129 chr2 231415819 231416074 -21840509 - MER8 DNA MER2_type 0 239 16 229 219 24 73 chr2 231416126 231416208 -21840375 - L2 LINE L2 -4 3309 3232 337 250 49 114 chr2 231416357 231416541 -21840042 + MER5B DNA MER1_type 1 172 -6 1725 45 0 0 chr2 231417422 231417621 -21838962 - AluY SINE Alu -112 199 1 3137 266 39 23 chr2 231417621 231418184 -21838399 + L1M4b LINE L1 93 679 -6180 2371 56 13 10 chr2 231418184 231418489 -21838094 - AluY SINE Alu -5 306 1 3137 266 39 23 chr2 231418489 231418906 -21837677 + L1M4b LINE L1 679 1088 -5771 2326 197 21 11 chr2 231418928 231419671 -21836912 + L1M4 LINE L1 5031 5766 -418 1313 199 38 17 chr2 231419671 231420016 -21836567 - MER93a LTR ERV1 0 402 1 338 105 35 0 chr2 231420652 231420709 -21835874 - MADE1 DNA Mariner -21 59 1 1683 193 3 3 chr2 231422377 231422677 -21833906 + AluJb SINE Alu 1 300 -12 22 0 0 0 chr2 231424216 231424238 -21832345 + AT_rich Low_complexity Low_complexity 1 22 0 351 40 81 0 chr2 231425022 231425096 -21831487 + (TA)n Simple_repeat Simple_repeat 2 81 0 728 187 8 0 chr2 231425944 231426078 -21830505 + FLAM_C SINE Alu 1 135 -8 1047 225 51 80 chr2 231426276 231426764 -21829819 - MER110A LTR ERV1 -4 464 36 2891 140 9 16 chr2 231427266 231427860 -21828723 - L1M1 LINE L1 -534 5769 5181 2240 158 18 5 chr2 231427858 231428307 -21828276 - L1M4c LINE L1 -5208 1176 722 * 1627 186 0 7 chr2 231428309 231428610 -21827973 - L1M4c LINE L1 -6067 317 19 861 207 39 69 chr2 231428631 231428774 -21827809 - L1MC4 LINE L1 -1 8041 7895 351 44 0 0 chr2 231428774 231428819 -21827764 + (TG)n Simple_repeat Simple_repeat 2 46 0 861 207 39 69 chr2 231428819 231429008 -21827575 - L1MC4 LINE L1 -147 7895 7719 458 174 11 120 chr2 231429216 231429312 -21827271 - L1M4 LINE L1 -856 5290 5222 1465 143 50 100 chr2 231429312 231429613 -21826970 - AluJo SINE Alu 0 312 27 458 174 11 120 chr2 231429613 231429700 -21826883 - L1M4 LINE L1 -924 5222 5127 1943 228 107 8 chr2 231429826 231430483 -21826100 - L1M4 LINE L1 -1725 4421 3700 1046 130 16 0 chr2 231431596 231431780 -21824803 - L1MA6 LINE L1 0 6300 6114 690 275 93 0 chr2 231431900 231432181 -21824402 + MLT1G1 LTR MaLR 186 553 -2 312 320 108 27 chr2 231432844 231433178 -21823405 - L1M4 LINE L1 -747 5399 5039 234 114 0 0 chr2 231433194 231433229 -21823354 - L1M4 LINE L1 -2589 3557 3523 2485 84 0 0 chr2 231433477 231433787 -21822796 - AluSq SINE Alu -3 310 1 207 283 76 33 chr2 231433934 231434026 -21822557 + L2 LINE L2 2712 2807 -507 438 386 26 0 chr2 231434159 231434312 -21822271 + MER91A DNA MER1_type 40 196 0 21 0 0 0 chr2 231434355 231434376 -21822207 + AT_rich Low_complexity Low_complexity 1 21 0 509 298 105 92 chr2 231434615 231435260 -21821323 - L2 LINE L2 -411 2903 2250 710 244 9 26 chr2 231435303 231435532 -21821051 - MER46C DNA MER2_type -113 225 1 401 218 148 35 chr2 231435532 231435674 -21820909 - MIR SINE MIR -64 198 41 * 478 360 61 7 chr2 231435672 231435969 -21820614 - L2 LINE L2 -1297 2017 1705 213 335 68 41 chr2 231436171 231436437 -21820146 - L2 LINE L2 -1929 1385 1113 693 204 39 55 chr2 231436534 231436569 -21820014 - MER5B DNA MER1_type 0 178 144 2304 117 0 0 chr2 231436569 231436878 -21819705 + AluSc SINE Alu 1 309 0 693 204 39 55 chr2 231436878 231437023 -21819560 - MER5B DNA MER1_type -34 144 1 513 273 130 36 chr2 231437061 231437369 -21819214 - MLT1I LTR MaLR 0 409 73 764 274 61 0 chr2 231437471 231437683 -21818900 - MIR SINE MIR -10 252 28 309 294 119 0 chr2 231441844 231441987 -21814596 - Charlie7 DNA MER1_type -2448 164 5 246 202 60 0 chr2 231443028 231443112 -21813471 + (TA)n Simple_repeat Simple_repeat 1 89 0 237 359 56 60 chr2 231443289 231443401 -21813182 - MIR SINE MIR -11 251 140 539 177 83 44 chr2 231443401 231443582 -21813001 + MER53 DNA DNA 1 188 -1 237 359 56 60 chr2 231443582 231443720 -21812863 - MIR SINE MIR -122 140 2 1886 140 140 53 chr2 231443757 231444151 -21812432 + MSTA LTR MaLR 1 428 0 1307 226 103 12 chr2 231444186 231444611 -21811972 - MLT1C LTR MaLR -2 465 2 191 77 0 51 chr2 231446165 231446204 -21810379 + (TATG)n Simple_repeat Simple_repeat 2 38 0 2059 150 0 3 chr2 231446289 231446596 -21809987 + AluSx SINE Alu 1 306 -6 213 232 0 0 chr2 231446628 231446697 -21809886 + (TG)n Simple_repeat Simple_repeat 2 70 0 490 217 12 0 chr2 231446725 231446886 -21809697 + (TG)n Simple_repeat Simple_repeat 2 164 0 347 237 0 15 chr2 231446867 231446998 -21809585 + (TATATG)n Simple_repeat Simple_repeat 6 134 0 * 331 237 139 35 chr2 231447414 231447587 -21808996 + L2 LINE L2 3026 3216 -97 411 311 57 0 chr2 231447916 231448038 -21808545 + MIR SINE MIR 25 153 -109 288 0 0 0 chr2 231448081 231448113 -21808470 + (TG)n Simple_repeat Simple_repeat 2 33 0 1422 205 43 0 chr2 231449515 231449818 -21806765 + LTR32 LTR ERVL 20 335 -136 737 178 7 7 chr2 231449879 231450025 -21806558 + LTR32 LTR ERVL 324 469 -2 473 219 25 8 chr2 231451706 231451825 -21804758 + MLT1H1 LTR MaLR 1 121 -434 486 279 68 26 chr2 231452103 231452443 -21804140 - MLT1G3 LTR MaLR 0 595 155 421 224 177 27 chr2 231452695 231452842 -21803741 + MER63A DNA MER1_type 32 200 -10 271 253 33 11 chr2 231452909 231452921 -21803662 - L2 LINE L2 -338 2975 2965 396 0 0 0 chr2 231452921 231452965 -21803618 + (TA)n Simple_repeat Simple_repeat 2 45 0 271 253 33 11 chr2 231452965 231453043 -21803540 - L2 LINE L2 -348 2965 2883 529 272 54 0 chr2 231454382 231454529 -21802054 + L2 LINE L2 3159 3313 0 303 122 0 0 chr2 231454951 231455000 -21801583 + (TA)n Simple_repeat Simple_repeat 1 49 0 2637 93 6 0 chr2 231455233 231455586 -21800997 - THE1A LTR MaLR 0 355 1 9012 98 119 4 chr2 231455586 231457003 -21799580 - THE1A-int LTR MaLR 0 1580 2 1560 112 4 0 chr2 231457004 231457237 -21799346 - THE1A LTR MaLR 0 355 122 747 154 35 0 chr2 231457338 231457481 -21799102 + THE1C LTR MaLR 228 375 0 536 322 13 13 chr2 231457491 231457640 -21798943 - MIR SINE MIR -97 165 17 889 207 17 0 chr2 231457801 231457980 -21798603 - MER5A DNA MER1_type -7 182 1 180 111 0 0 chr2 231458129 231458156 -21798427 + (CA)n Simple_repeat Simple_repeat 2 28 0 216 167 0 0 chr2 231458650 231458686 -21797897 + (TATG)n Simple_repeat Simple_repeat 4 39 0 390 267 132 11 chr2 231458686 231458878 -21797705 - L1ME LINE L1 -297 5824 5612 2165 92 16 22 chr2 231459073 231459387 -21797196 - AluSx SINE Alu 0 312 1 216 97 0 0 chr2 231459547 231459578 -21797005 + (T)n Simple_repeat Simple_repeat 1 31 0 192 77 0 0 chr2 231460846 231460872 -21795711 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 1443 140 12 62 chr2 231460970 231461227 -21795356 + AluSq SINE Alu 69 312 -1 387 289 94 50 chr2 231461314 231461632 -21794951 + L2 LINE L2 2982 3313 0 339 297 101 49 chr2 231461952 231462191 -21794392 - MIR SINE MIR -6 256 7 504 179 0 0 chr2 231462593 231462677 -21793906 - AluJ/FLAM SINE Alu -228 84 1 2143 120 3 0 chr2 231463181 231463481 -21793102 - AluSq SINE Alu -12 301 1 21 0 0 0 chr2 231464061 231464082 -21792501 + AT_rich Low_complexity Low_complexity 1 21 0 549 238 98 24 chr2 231464211 231464397 -21792186 + MIR SINE MIR 5 200 -62 2789 36 17 0 chr2 231464487 231464846 -21791737 + L1PA4 LINE L1 5771 6135 -20 2010 126 7 14 chr2 231465196 231465489 -21791094 + AluSx SINE Alu 1 291 -21 392 351 81 12 chr2 231465683 231465942 -21790641 - L1ME4a LINE L1 -2 6119 5843 446 252 34 14 chr2 231466094 231466241 -21790342 + MER69 DNA AcHobo 203 352 -874 192 77 0 0 chr2 231468064 231468090 -21788493 + (T)n Simple_repeat Simple_repeat 1 26 0 271 176 0 27 chr2 231468313 231468387 -21788196 + (TA)n Simple_repeat Simple_repeat 1 72 0 285 330 0 0 chr2 231469502 231469602 -21786981 + (TATG)n Simple_repeat Simple_repeat 2 101 0 2318 76 3 0 chr2 231469875 231470163 -21786420 + AluY SINE Alu 1 289 -22 4733 140 27 26 chr2 231471566 231472197 -21784386 + L1PB4 LINE L1 5160 5797 -359 189 0 0 0 chr2 231472197 231472218 -21784365 + (CA)n Simple_repeat Simple_repeat 2 22 0 4733 140 27 26 chr2 231472218 231472579 -21784004 + L1PB4 LINE L1 5797 6156 0 3077 48 0 0 chr2 231472825 231473203 -21783380 - L1PA5 LINE L1 0 6154 5777 5564 54 20 3 chr2 231473203 231473984 -21782599 + L1P LINE L1 2939 3733 -2413 431 324 0 14 chr2 231476489 231476631 -21779952 + (CATATA)n Simple_repeat Simple_repeat 5 144 0 1160 137 0 0 chr2 231476732 231476893 -21779690 - AluJ SINE Alu -8 304 144 1041 134 6 17 chr2 231476897 231477218 -21779365 + THE1C LTR MaLR 1 375 0 3311 132 140 0 chr2 231477220 231477813 -21778770 + THE1C-int LTR MaLR 3 678 -902 1421 167 57 20 chr2 231477820 231478120 -21778463 + THE1C LTR MaLR 65 375 0 330 231 0 13 chr2 231478120 231478195 -21778388 - AluJ SINE Alu -160 142 69 238 351 48 97 chr2 231478706 231478974 -21777609 + L2 LINE L2 3015 3269 -3 1969 129 0 11 chr2 231479745 231480056 -21776527 + AluSx SINE Alu 1 308 0 183 100 0 0 chr2 231480639 231480669 -21775914 + (TTTTTA)n Simple_repeat Simple_repeat 4 33 0 233 348 7 44 chr2 231480997 231481132 -21775451 + MIR SINE MIR 22 151 -111 2223 120 3 0 chr2 231481207 231481507 -21775076 - AluSx SINE Alu -6 306 6 2064 135 0 0 chr2 231482173 231482491 -21774092 + AluSx SINE Alu 5 322 0 2356 109 0 0 chr2 231482494 231482806 -21773777 + AluSx SINE Alu 1 312 0 458 311 49 18 chr2 231483698 231483862 -21772721 - MIR SINE MIR -72 190 22 282 56 0 0 chr2 231484117 231484153 -21772430 + (TTA)n Simple_repeat Simple_repeat 2 37 0 2037 125 4 0 chr2 231484155 231484435 -21772148 - AluSx SINE Alu -31 281 1 21 36 0 0 chr2 231484438 231484466 -21772117 + AT_rich Low_complexity Low_complexity 1 28 0 248 255 26 33 chr2 231484668 231484821 -21771762 - L1ME LINE L1 -260 5861 5710 499 227 38 142 chr2 231484845 231485184 -21771399 - L1MC4 LINE L1 0 8042 7739 2579 137 40 7 chr2 231485228 231485672 -21770911 - L1PA13 LINE L1 -1 6162 5704 307 346 0 0 chr2 231485689 231485822 -21770761 - L1ME LINE L1 -413 5708 5576 188 246 82 16 chr2 231485930 231485991 -21770592 + MIR SINE MIR 109 173 -89 216 360 145 28 chr2 231486369 231486658 -21769925 - L2 LINE L2 -5 3267 2945 414 0 0 0 chr2 231487977 231488023 -21768560 + (TG)n Simple_repeat Simple_repeat 1 46 0 21 0 0 0 chr2 231488811 231488832 -21767751 + AT_rich Low_complexity Low_complexity 1 21 0 482 318 106 28 chr2 231490139 231490535 -21766048 + MLT1K LTR MaLR 144 570 -18 628 269 83 90 chr2 231491422 231491536 -21765047 - MLT1H LTR MaLR -2 547 434 2369 135 8 16 chr2 231491536 231491914 -21764669 + THE1C LTR MaLR 1 375 0 9330 140 41 7 chr2 231491914 231493440 -21763143 + THE1C-int LTR MaLR 1 1579 -1 1680 161 60 35 chr2 231493441 231493807 -21762776 + THE1C LTR MaLR 1 375 0 628 269 83 90 chr2 231493807 231494135 -21762448 - MLT1H LTR MaLR -113 436 105 12427 146 20 8 chr2 231494136 231496287 -21760296 - Tigger1 DNA MER2_type 0 2418 242 424 341 28 22 chr2 231497779 231497961 -21758622 + MER5A DNA MER1_type 7 189 0 39 38 0 0 chr2 231498414 231498467 -21758116 + AT_rich Low_complexity Low_complexity 1 53 0 364 235 32 9 chr2 231498657 231498771 -21757812 - MIR3 SINE MIR -1 207 91 867 191 62 29 chr2 231500093 231500437 -21756146 + MSTD LTR MaLR 3 365 0 1860 105 63 3 chr2 231500862 231501148 -21755435 + L1MC1 LINE L1 6016 6318 -15 30 100 0 0 chr2 231501459 231501559 -21755024 + AT_rich Low_complexity Low_complexity 1 100 0 412 304 0 23 chr2 231501862 231502033 -21754550 - MLT1K LTR MaLR -3 585 419 323 318 168 0 chr2 231502178 231502351 -21754232 - MLT1K LTR MaLR -350 238 37 264 59 0 0 chr2 231502550 231502584 -21753999 + (T)n Simple_repeat Simple_repeat 1 34 0 669 302 85 8 chr2 231502897 231503155 -21753428 + L2 LINE L2 3015 3292 -21 5070 169 15 5 chr2 231504232 231505800 -21750783 + L1PB4 LINE L1 4566 6152 -4 2028 43 8 4 chr2 231555815 231556069 -21700514 + AluY SINE Alu 47 301 -10 3291 122 27 19 chr2 231556185 231556708 -21699875 + MER1A DNA MER1_type 1 527 0 1051 150 173 26 chr2 231556718 231556926 -21699657 - MER44D DNA MER2_type -1885 606 430 183 42 0 0 chr2 231556926 231556950 -21699633 + (TC)n Simple_repeat Simple_repeat 1 24 0 1051 150 173 26 chr2 231556950 231557007 -21699576 - MER44D DNA MER2_type -2061 430 32 185 0 40 0 chr2 231557501 231557526 -21699057 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 238 167 74 37 chr2 231557623 231557677 -21698906 + L2 LINE L2 3217 3272 0 1293 204 19 43 chr2 231557765 231558088 -21698495 + L1MA10 LINE L1 6017 6331 -3 402 255 121 40 chr2 231558672 231558821 -21697762 + MIR SINE MIR 53 213 -49 1318 265 60 58 chr2 231558962 231559482 -21697101 + MLT1G1 LTR MaLR 75 595 0 34 65 0 0 chr2 231560915 231560977 -21695606 + AT_rich Low_complexity Low_complexity 1 62 0 189 0 0 0 chr2 231561790 231561811 -21694772 + (CA)n Simple_repeat Simple_repeat 2 22 0 22 0 0 0 chr2 231563435 231563457 -21693126 + AT_rich Low_complexity Low_complexity 1 22 0 342 261 162 39 chr2 231563774 231564063 -21692520 + MLT1J2 LTR MaLR 75 414 -7 318 381 48 0 chr2 231565258 231565384 -21691199 - L2 LINE L2 0 3272 3141 642 274 81 4 chr2 231565609 231565857 -21690726 - L1ME4a LINE L1 -69 6052 5786 795 301 106 40 chr2 231565858 231566279 -21690304 - LTR67 LTR ERVL 0 557 109 1203 141 0 81 chr2 231566279 231566527 -21690056 + MLT1B LTR MaLR 1 228 -162 486 289 18 42 chr2 231566641 231566807 -21689776 - MER5B DNA MER1_type -1 177 16 227 321 26 40 chr2 231567216 231567369 -21689214 + MIR3 SINE MIR 32 180 -28 180 200 0 0 chr2 231567433 231567473 -21689110 + (CA)n Simple_repeat Simple_repeat 2 41 0 285 250 115 0 chr2 231567510 231567606 -21688977 - MER103 DNA DNA -46 120 14 226 197 0 49 chr2 231567670 231567731 -21688852 + MIR3 SINE MIR 151 208 0 1159 204 44 29 chr2 231567872 231568248 -21688335 + MLT2B3 LTR ERVL 174 554 0 337 341 16 23 chr2 231570485 231570614 -21685969 + MIR3 SINE MIR 15 142 -66 1176 188 108 55 chr2 231571549 231571718 -21684865 - MLT1E1 LTR MaLR 0 654 495 2120 131 0 6 chr2 231571718 231572030 -21684553 - AluSx SINE Alu -2 310 1 1176 188 108 55 chr2 231572030 231572417 -21684166 - MLT1E1 LTR MaLR -159 495 1 311 222 28 65 chr2 231572577 231572685 -21683898 - L1ME2 LINE L1 -130 6034 5931 556 271 135 0 chr2 231572695 231572887 -21683696 - L1M4 LINE L1 -2046 4100 3883 596 226 0 66 chr2 231572943 231573124 -21683459 - AluJb SINE Alu -15 297 129 762 278 70 45 chr2 231573129 231573774 -21682809 - L1M4 LINE L1 -2404 3742 3080 504 250 9 0 chr2 231573831 231573947 -21682636 + L1ME2 LINE L1 6039 6155 -9 665 276 122 0 chr2 231573948 231574162 -21682421 + L1MC4 LINE L1 6358 6597 -1445 222 37 0 0 chr2 231574202 231574229 -21682354 + (TG)n Simple_repeat Simple_repeat 2 28 0 250 245 0 0 chr2 231575828 231575877 -21680706 + (TG)n Simple_repeat Simple_repeat 1 49 0 608 295 11 5 chr2 231576408 231576598 -21679985 + MER117 DNA MER1_type 1 191 -6 4033 131 16 2 chr2 231576671 231577296 -21679287 + L1PA16 LINE L1 5524 6157 -9 200 250 11 23 chr2 231577302 231577390 -21679193 + A-rich Low_complexity Low_complexity 2 88 0 326 250 0 0 chr2 231578302 231578366 -21678217 + tRNA-Ile-ATT tRNA tRNA 1 64 -13 324 262 48 0 chr2 231578697 231578781 -21677802 - MIR SINE MIR -7 255 168 25 31 0 0 chr2 231578805 231578837 -21677746 + AT_rich Low_complexity Low_complexity 1 32 0 308 359 63 39 chr2 231578860 231579066 -21677517 + MIR SINE MIR 34 244 -18 404 161 12 0 chr2 231579067 231579148 -21677435 + GA-rich Low_complexity Low_complexity 5 86 0 602 228 144 6 chr2 231579237 231579417 -21677166 - MER58A DNA MER1_type -15 209 5 2173 159 26 0 chr2 231579901 231580285 -21676298 - L1 LINE L1 -1114 5032 4639 26 0 0 0 chr2 231581085 231581111 -21675472 + AT_rich Low_complexity Low_complexity 1 26 0 191 240 40 0 chr2 231583199 231583249 -21673334 - L2 LINE L2 0 3313 3262 23 54 0 0 chr2 231583322 231583359 -21673224 + AT_rich Low_complexity Low_complexity 1 37 0 279 307 28 68 chr2 231583363 231583539 -21673044 - L2 LINE L2 -2 3311 3143 204 351 80 7 chr2 231583658 231583809 -21672774 - L2 LINE L2 -367 2947 2786 309 266 43 43 chr2 231584348 231584487 -21672096 + HAL1 LINE L1 1974 2112 -395 300 343 92 38 chr2 231584526 231584818 -21671765 + HAL1 LINE L1 2199 2506 -1 21 36 0 0 chr2 231585729 231585757 -21670826 + AT_rich Low_complexity Low_complexity 1 28 0 443 257 37 7 chr2 231585804 231585940 -21670643 - LTR67 LTR ERVL 0 557 418 205 156 0 0 chr2 231586618 231586650 -21669933 + (ATG)n Simple_repeat Simple_repeat 2 33 0 570 272 82 43 chr2 231586650 231586882 -21669701 - MIR SINE MIR 0 262 22 217 307 127 60 chr2 231586858 231587024 -21669559 + MIR SINE MIR 20 196 -66 * 289 311 97 51 chr2 231587145 231587341 -21669242 + MLT1K LTR MaLR 27 231 -357 348 299 112 28 chr2 231587499 231587713 -21668870 + MLT1K LTR MaLR 330 561 -27 542 261 127 0 chr2 231587939 231588081 -21668502 - MIR3 SINE MIR -9 199 40 888 260 18 43 chr2 231588132 231588409 -21668174 - MARNA DNA Mariner -158 428 159 209 249 20 0 chr2 231588661 231588724 -21667859 - MIR SINE MIR -44 164 100 1860 59 4 0 chr2 231588725 231588963 -21667620 + L1PA5 LINE L1 5916 6154 0 23 0 0 0 chr2 231589038 231589061 -21667522 + AT_rich Low_complexity Low_complexity 1 23 0 1844 122 0 0 chr2 231590423 231590686 -21665897 + AluSx SINE Alu 49 311 -1 311 289 94 6 chr2 231590719 231590878 -21665705 + MIR SINE MIR 76 248 -14 2455 65 0 3 chr2 231590891 231591198 -21665385 + AluY SINE Alu 1 306 -5 1789 159 4 0 chr2 231591999 231592276 -21664307 + AluJb SINE Alu 7 284 -28 23 68 0 0 chr2 231592276 231592320 -21664263 + AT_rich Low_complexity Low_complexity 1 44 0 479 232 0 0 chr2 231592342 231592441 -21664142 - LTR33A LTR ERVL 0 523 425 1331 136 0 60 chr2 231592446 231592681 -21663902 - AluSc SINE Alu -9 300 80 567 267 69 99 chr2 231592707 231593052 -21663531 - LTR33A LTR ERVL -129 394 60 1773 175 0 0 chr2 231593052 231593366 -21663217 + AluJo SINE Alu 1 314 0 567 267 69 99 chr2 231593366 231593423 -21663160 - LTR33A LTR ERVL -463 60 3 1089 305 138 33 chr2 231593438 231594646 -21661937 + L1ME LINE L1 3715 5047 -1099 695 236 54 81 chr2 231594824 231594878 -21661705 - MIR SINE MIR -10 252 198 261 0 0 0 chr2 231594878 231594907 -21661676 + (TG)n Simple_repeat Simple_repeat 2 30 0 210 71 0 0 chr2 231594906 231594934 -21661649 + (CATATA)n Simple_repeat Simple_repeat 3 30 0 * 695 236 54 81 chr2 231594907 231594982 -21661601 - MIR SINE MIR -64 198 123 2515 118 6 8 chr2 231594982 231595347 -21661236 - THE1B LTR MaLR 0 364 1 695 236 54 81 chr2 231595347 231595502 -21661081 - MIR SINE MIR -139 123 1 284 327 19 53 chr2 231595507 231595715 -21660868 + L2 LINE L2 3109 3309 -4 742 286 72 35 chr2 231595735 231596443 -21660140 + L1ME LINE L1 5086 5822 -340 935 287 105 59 chr2 231596454 231596848 -21659735 + L1ME LINE L1 20 394 -5676 3652 131 15 40 chr2 231596848 231597504 -21659079 + L1PA15 LINE L1 5523 6162 -3 935 287 105 59 chr2 231597504 231598132 -21658451 + L1ME LINE L1 394 1089 -4981 1548 242 122 10 chr2 231598139 231598716 -21657867 + L1ME1 LINE L1 5550 6122 -44 206 118 66 40 chr2 231598856 231598932 -21657651 + (TA)n Simple_repeat Simple_repeat 2 79 0 215 303 242 0 chr2 231598948 231599047 -21657536 - L2 LINE L2 -1 3312 3190 997 215 100 19 chr2 231599569 231599881 -21656702 - MSTD LTR MaLR -2 394 1 298 231 80 39 chr2 231600425 231600563 -21656020 - L1MC/D LINE L1 -536 5585 5436 1107 270 107 42 chr2 231601300 231601976 -21654607 + MER20B DNA MER1_type 1 779 -4 194 105 26 0 chr2 231602166 231602204 -21654379 + CT-rich Low_complexity Low_complexity 2 40 0 2439 152 34 13 chr2 231602667 231603133 -21653450 - L1 LINE L1 -1395 4751 4276 3226 165 44 110 chr2 231603133 231603365 -21653218 + L1MA9 LINE L1 4687 4933 -1379 5697 45 1 0 chr2 231603365 231604057 -21652526 + L1PA5 LINE L1 5455 6147 -7 3226 165 44 110 chr2 231604057 231604368 -21652215 + L1MA9 LINE L1 4933 5263 -1049 180 0 0 0 chr2 231604368 231604388 -21652195 + (CATA)n Simple_repeat Simple_repeat 2 21 0 3226 165 44 110 chr2 231604388 231604769 -21651814 + L1MA9 LINE L1 5263 5668 -644 1035 89 0 0 chr2 231604769 231604904 -21651679 + AluSp/q SINE Alu 161 295 -18 3226 165 44 110 chr2 231604904 231605072 -21651511 + L1MA9 LINE L1 5668 5846 -466 372 22 0 0 chr2 231605072 231605117 -21651466 + (TG)n Simple_repeat Simple_repeat 2 46 0 284 78 39 0 chr2 231605117 231605168 -21651415 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 3226 165 44 110 chr2 231605168 231605673 -21650910 + L1MA9 LINE L1 5844 6290 -22 394 283 94 17 chr2 231606111 231606291 -21650292 - MER102a DNA MER1_type -26 304 111 1053 160 22 35 chr2 231606384 231606615 -21649968 + L1MA4 LINE L1 6072 6299 -1 356 363 71 6 chr2 231606732 231606900 -21649683 + MIR3 SINE MIR 30 208 0 41 36 0 0 chr2 231607322 231607377 -21649206 + AT_rich Low_complexity Low_complexity 1 55 0 617 195 8 39 chr2 231609491 231609619 -21646964 - MER63 DNA MER1_type -309 753 4 260 234 0 31 chr2 231610224 231610288 -21646295 - MIR SINE MIR -129 79 18 332 281 161 62 chr2 231610366 231610608 -21645975 - MLT1K LTR MaLR -29 559 294 21 0 0 0 chr2 231611396 231611417 -21645166 + AT_rich Low_complexity Low_complexity 1 21 0 470 208 59 10 chr2 231611546 231611647 -21644936 + MER5A DNA MER1_type 84 189 0 241 325 75 0 chr2 231611657 231611737 -21644846 + MIR SINE MIR 104 189 -73 182 282 14 42 chr2 231612008 231612079 -21644504 + L3 LINE CR1 804 872 -705 448 339 77 9 chr2 231612856 231613077 -21643506 + MIR SINE MIR 20 255 -7 21 0 0 0 chr2 231616167 231616188 -21640395 + AT_rich Low_complexity Low_complexity 1 21 0 245 158 66 0 chr2 231616907 231616983 -21639600 + (TTTA)n Simple_repeat Simple_repeat 1 81 0 308 250 143 18 chr2 231618234 231618346 -21638237 - MER91A DNA MER1_type -70 126 1 431 345 50 50 chr2 231619895 231620315 -21636268 + L3 LINE CR1 398 817 -760 339 44 0 0 chr2 231620691 231620736 -21635847 + (CA)n Simple_repeat Simple_repeat 1 45 0 1353 159 9 0 chr2 231620882 231621096 -21635487 + AluJo SINE Alu 86 301 -11 207 100 0 0 chr2 231621420 231621450 -21635133 + (TAGA)n Simple_repeat Simple_repeat 3 32 0 1051 179 5 14 chr2 231621452 231621670 -21634913 + MER96B DNA MER1_type? 12 227 -190 420 97 0 0 chr2 231622445 231622507 -21634076 + (TC)n Simple_repeat Simple_repeat 1 62 0 334 333 114 0 chr2 231623690 231623813 -21632770 + L3 LINE CR1 1174 1310 -267 216 0 0 0 chr2 231624077 231624101 -21632482 + (CA)n Simple_repeat Simple_repeat 1 24 0 2151 135 0 3 chr2 231624124 231624436 -21632147 + AluSx SINE Alu 1 311 -1 22 35 0 0 chr2 231624758 231624787 -21631796 + AT_rich Low_complexity Low_complexity 1 29 0 330 307 10 0 chr2 231625299 231625400 -21631183 + MIR3 SINE MIR 68 169 -39 356 318 39 7 chr2 231625834 231625985 -21630598 + MIR3 SINE MIR 32 187 -21 280 194 39 133 chr2 231626401 231626581 -21630002 - MIR SINE MIR -25 237 75 21 36 0 0 chr2 231626663 231626691 -21629892 + AT_rich Low_complexity Low_complexity 1 28 0 245 395 0 0 chr2 231626731 231626812 -21629771 - L2 LINE L2 -27 3245 3165 27 29 0 0 chr2 231627125 231627159 -21629424 + AT_rich Low_complexity Low_complexity 1 34 0 256 161 86 74 chr2 231627537 231627618 -21628965 - HAL1 LINE L1 -5 2502 2421 917 208 43 50 chr2 231628242 231628564 -21628019 - MER33 DNA MER1_type 0 324 5 424 243 63 27 chr2 231628883 231628994 -21627589 - MIR3 SINE MIR -48 160 46 471 242 26 53 chr2 231629440 231629667 -21626916 + L1ME2 LINE L1 5882 6102 -62 734 30 40 0 chr2 231630735 231630836 -21625747 + L1MA2 LINE L1 6200 6304 0 359 332 62 57 chr2 231631381 231631625 -21624958 - L3b LINE CR1 -3 1580 1336 1911 121 58 73 chr2 231632426 231632822 -21623761 - MLT1B LTR MaLR 0 390 1 288 344 138 15 chr2 231632863 231633058 -21623525 - MIR SINE MIR -37 225 7 3084 92 5 0 chr2 231633524 231633959 -21622624 + L1PA14 LINE L1 5725 6161 0 231 61 0 0 chr2 231634165 231634198 -21622385 + (TAAAAA)n Simple_repeat Simple_repeat 2 34 0 271 343 64 21 chr2 231634222 231634362 -21622221 + MER5A DNA MER1_type 7 152 -37 204 333 88 50 chr2 231634235 231634394 -21622189 - MER5A DNA MER1_type -4 185 21 * 821 218 202 81 chr2 231634417 231634862 -21621721 - MLT1F1 LTR MaLR 0 567 69 210 118 0 0 chr2 231635465 231635499 -21621084 + (A)n Simple_repeat Simple_repeat 1 34 0 207 283 48 70 chr2 231635663 231635803 -21620780 + MIR3 SINE MIR 19 156 -52 595 154 85 80 chr2 231635803 231635991 -21620592 + MER5A DNA MER1_type 1 189 0 207 283 48 70 chr2 231635991 231636037 -21620546 + MIR3 SINE MIR 156 201 -7 368 331 18 36 chr2 231636177 231636343 -21620240 - MIR3 SINE MIR -43 165 3 2319 103 3 0 chr2 231636527 231636829 -21619754 + AluY SINE Alu 1 303 -8 305 309 16 56 chr2 231637846 231637972 -21618611 + MIR SINE MIR 19 139 -69 446 225 47 47 chr2 231638407 231638536 -21618047 - MER58B DNA MER1_type -15 326 198 1931 158 13 0 chr2 231639405 231639708 -21616875 - AluSx SINE Alu -5 307 1 1629 190 11 0 chr2 231641725 231642004 -21614579 + AluJo SINE Alu 1 282 -30 424 253 0 0 chr2 231643279 231643362 -21613221 - FLAM_A SINE Alu -59 83 1 391 225 0 0 chr2 231643731 231643820 -21612763 - MER103 DNA DNA -75 91 3 445 340 48 29 chr2 231644549 231644758 -21611825 - L3 LINE CR1 -359 1218 1006 1911 139 51 0 chr2 231648354 231648648 -21607935 - AluSx SINE Alu -3 309 1 2311 109 0 0 chr2 231648764 231649058 -21607525 - AluSx SINE Alu -18 294 1 739 313 69 42 chr2 231649298 231649748 -21606835 - L2 LINE L2 -8 3305 2844 412 315 88 48 chr2 231649781 231650076 -21606507 - L2 LINE L2 -559 2755 2449 1878 108 4 0 chr2 231650612 231650862 -21605721 + AluSx SINE Alu 39 289 -23 582 222 193 0 chr2 231652966 231653142 -21603441 - MER63A DNA MER1_type 0 210 1 329 266 14 79 chr2 231654438 231654577 -21602006 + MIR SINE MIR 82 211 -51 2300 117 0 0 chr2 231654584 231654884 -21601699 + AluSg SINE Alu 1 300 -10 458 283 139 0 chr2 231655093 231655259 -21601324 - MIR SINE MIR -3 259 71 2031 150 33 28 chr2 231657771 231658131 -21598452 + THE1B LTR MaLR 3 364 0 25 0 0 0 chr2 231658950 231658975 -21597608 + AT_rich Low_complexity Low_complexity 1 25 0 212 308 43 34 chr2 231660197 231660314 -21596269 + MIR3 SINE MIR 85 202 -6 245 183 17 0 chr2 231660900 231660960 -21595623 + (TA)n Simple_repeat Simple_repeat 2 62 0 479 298 64 11 chr2 231661817 231662005 -21594578 + MIR SINE MIR 29 226 -36 1881 142 7 11 chr2 231662774 231663055 -21593528 + AluSx SINE Alu 1 280 -32 267 31 0 0 chr2 231663055 231663087 -21593496 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 248 207 35 0 chr2 231663410 231663468 -21593115 + MIR SINE MIR 87 146 -116 717 339 98 9 chr2 231664131 231664582 -21592001 - L2 LINE L2 -671 2643 2153 246 239 69 85 chr2 231664835 231664965 -21591618 + L1ME LINE L1 5693 5820 -301 26 30 0 0 chr2 231665014 231665047 -21591536 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr2 231665200 231665230 -21591353 + AT_rich Low_complexity Low_complexity 1 30 0 218 283 50 0 chr2 231665267 231665327 -21591256 - MIR SINE MIR 0 262 200 183 80 0 0 chr2 231666118 231666143 -21590440 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 23 33 0 0 chr2 231667164 231667194 -21589389 + AT_rich Low_complexity Low_complexity 1 30 0 2359 103 3 0 chr2 231667440 231667751 -21588832 - AluSx SINE Alu 0 312 1 1164 143 25 0 chr2 231668364 231668560 -21588023 + MER2 DNA MER2_type 2 202 -143 416 150 57 42 chr2 231670221 231670561 -21586022 + (TTATA)n Simple_repeat Simple_repeat 1 345 0 194 148 56 49 chr2 231670574 231670736 -21585847 + (TTATA)n Simple_repeat Simple_repeat 1 163 0 338 154 46 24 chr2 231670778 231671162 -21585421 + (TTATA)n Simple_repeat Simple_repeat 1 392 0 254 200 32 32 chr2 231671084 231671209 -21585374 + (TATAA)n Simple_repeat Simple_repeat 4 128 0 * 696 269 109 0 chr2 231671254 231671455 -21585128 - MER58A DNA MER1_type -1 223 1 2330 108 0 7 chr2 231672071 231672378 -21584205 + AluSc SINE Alu 1 305 -4 6851 10 2 0 chr2 231672498 231673312 -21583271 - L1PA2 LINE L1 -5 6150 5335 2146 100 13 23 chr2 231673696 231673997 -21582586 - AluSx SINE Alu -1 311 14 2414 244 20 15 chr2 231674034 231674721 -21581862 - L1ME1 LINE L1 -51 6115 5425 22 35 0 0 chr2 231674721 231674750 -21581833 + AT_rich Low_complexity Low_complexity 1 29 0 194 304 159 2 chr2 231677673 231677769 -21578814 + MIR SINE MIR 42 149 -70 198 0 0 0 chr2 231678062 231678084 -21578499 + (T)n Simple_repeat Simple_repeat 1 22 0 185 0 40 0 chr2 231679726 231679751 -21576832 + (CAAAAA)n Simple_repeat Simple_repeat 5 30 0 333 118 0 0 chr2 231679872 231679923 -21576660 + L1PA7 LINE L1 6097 6147 -7 255 271 169 68 chr2 231680244 231680451 -21576132 + MIR SINE MIR 3 230 -32 248 308 35 29 chr2 231680781 231680953 -21575630 + MER69A DNA AcHobo 2 174 -3 392 299 14 0 chr2 231681198 231681342 -21575241 - L1ME3A LINE L1 -13 6157 6012 239 276 67 0 chr2 231681366 231681471 -21575112 - L1MC4 LINE L1 -1 8041 7930 4323 103 11 23 chr2 231681533 231682175 -21574408 + MER51A LTR ERV1 1 634 0 337 236 151 27 chr2 231682207 231682432 -21574151 - L1MC4 LINE L1 -190 7852 7600 3577 180 50 45 chr2 231682584 231682688 -21573895 - MER45R DNA AcHobo 0 1581 1479 1659 191 3 17 chr2 231682688 231682981 -21573602 + AluJb SINE Alu 6 294 -18 3577 180 50 45 chr2 231682981 231683826 -21572757 - MER45R DNA AcHobo -102 1479 628 203 176 0 0 chr2 231683830 231683864 -21572719 + (CATA)n Simple_repeat Simple_repeat 2 35 0 1218 125 83 0 chr2 231683895 231684087 -21572496 - L1PA10 LINE L1 -14 6154 5947 21 0 0 0 chr2 231684723 231684744 -21571839 + AT_rich Low_complexity Low_complexity 1 21 0 493 321 102 0 chr2 231684797 231684984 -21571599 - MIR SINE MIR -21 241 36 727 301 18 9 chr2 231685189 231685418 -21571165 + MIR SINE MIR 31 261 -1 2788 216 79 34 chr2 231686081 231686933 -21569650 + MER97a DNA MER1_type 2 891 -3 1401 197 56 0 chr2 231687005 231687289 -21569294 + MLT2B2 LTR ERVL 1 300 -215 1794 326 91 19 chr2 231688642 231689524 -21567059 + L2 LINE L2 88 1032 -2282 1958 202 86 24 chr2 231689524 231689890 -21566693 - MLT1F1 LTR MaLR -71 496 95 2040 131 13 19 chr2 231689890 231690204 -21566379 + AluSq SINE Alu 1 312 -1 1958 202 86 24 chr2 231690204 231690292 -21566291 - MLT1F1 LTR MaLR -472 95 14 219 318 0 0 chr2 231690304 231690367 -21566216 - MIR SINE MIR -119 143 81 849 263 48 20 chr2 231690422 231690736 -21565847 - MLT1J1 LTR MaLR -131 319 1 234 204 19 19 chr2 231691646 231691700 -21564883 + MLT1H LTR MaLR 109 162 -387 551 178 19 0 chr2 231693823 231693930 -21562653 + MER6 DNA MER2_type 380 488 -377 4249 161 23 22 chr2 231693934 231695389 -21561194 - L1MA4 LINE L1 -235 6065 4618 837 182 5 30 chr2 231695386 231695584 -21560999 + L1MA4 LINE L1 4435 4627 -1519 * 480 139 0 0 chr2 231695711 231695790 -21560793 + (GAA)n Simple_repeat Simple_repeat 2 80 0 2061 127 0 0 chr2 231695827 231696110 -21560473 - AluSc SINE Alu -26 283 1 186 279 202 16 chr2 231696615 231696744 -21559839 - MIR3 SINE MIR -16 192 40 304 327 48 18 chr2 231697132 231697300 -21559283 + MIR SINE MIR 31 203 -59 276 111 0 0 chr2 231698290 231698335 -21558248 + (CA)n Simple_repeat Simple_repeat 1 45 0 221 365 209 0 chr2 231698750 231698898 -21557685 - MIR SINE MIR -64 198 20 1650 191 16 19 chr2 231699076 231699385 -21557198 - AluJb SINE Alu -4 308 1 261 0 0 0 chr2 231699441 231699470 -21557113 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 371 353 112 45 chr2 231699474 231699831 -21556752 - L2 LINE L2 -8 3264 2884 203 299 75 86 chr2 231699840 231699863 -21556720 + MIR SINE MIR 90 112 -150 1855 161 41 19 chr2 231699863 231700230 -21556353 - THE1C LTR MaLR 0 375 1 203 299 75 86 chr2 231700230 231700380 -21556203 + MIR SINE MIR 112 261 -1 508 253 35 52 chr2 231700622 231700796 -21555787 + MER63A DNA MER1_type 40 210 0 2478 81 0 0 chr2 231701306 231701652 -21554931 + AluY SINE Alu 1 346 0 414 214 52 65 chr2 231703223 231703377 -21553206 + MER103 DNA DNA 12 163 -3 429 290 25 37 chr2 231703568 231703730 -21552853 - MIR SINE MIR -46 216 57 384 292 117 0 chr2 231704299 231704436 -21552147 + MIR SINE MIR 2 154 -108 248 331 23 15 chr2 231705096 231705226 -21551357 + MLT1J2 LTR MaLR 73 203 -247 400 284 40 20 chr2 231705278 231705426 -21551157 + MLT1J2 LTR MaLR 285 435 -15 1150 176 0 0 chr2 231705506 231705699 -21550884 + L1PB4 LINE L1 5952 6144 -12 2167 125 0 0 chr2 231705705 231706001 -21550582 + AluSx SINE Alu 1 296 -16 486 302 153 0 chr2 231706717 231706906 -21549677 - MIR SINE MIR -4 258 41 195 204 0 0 chr2 231709010 231709064 -21547519 + (CA)n Simple_repeat Simple_repeat 2 55 0 590 247 56 19 chr2 231709849 231710011 -21546572 - MIR SINE MIR -87 175 8 2518 54 3 10 chr2 231710102 231710415 -21546168 + AluY SINE Alu 1 311 0 973 191 0 6 chr2 231711043 231711211 -21545372 + AluJo SINE Alu 1 167 -145 282 254 115 39 chr2 231712302 231712432 -21544151 - MIR SINE MIR -102 160 21 1994 125 11 4 chr2 231712921 231713227 -21543356 + AluSx SINE Alu 3 310 0 23 33 0 0 chr2 231716946 231716976 -21539607 + AT_rich Low_complexity Low_complexity 1 30 0 220 305 45 91 chr2 231717712 231717866 -21538717 - MIR3 SINE MIR -20 188 42 23 54 0 0 chr2 231719871 231719908 -21536675 + AT_rich Low_complexity Low_complexity 1 37 0 241 145 32 0 chr2 231721198 231721260 -21535323 + (TA)n Simple_repeat Simple_repeat 1 64 0 1232 128 0 0 chr2 231721732 231721904 -21534679 - AluSg/x SINE Alu -15 297 126 2390 79 0 3 chr2 231721904 231722209 -21534374 - AluSg SINE Alu -6 304 1 246 239 9 55 chr2 231724982 231725091 -21531492 + A-rich Low_complexity Low_complexity 2 105 0 2047 115 0 45 chr2 231726718 231727030 -21529553 + AluSq SINE Alu 4 301 -12 180 77 0 0 chr2 231727478 231727504 -21529079 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 1968 147 10 0 chr2 231727591 231727891 -21528692 + AluSx SINE Alu 1 303 -9 300 163 33 54 chr2 231728080 231728172 -21528411 - L1M4 LINE L1 -970 5176 5087 997 129 7 32 chr2 231728407 231728562 -21528021 + AluSg/x SINE Alu 113 263 -49 1157 137 0 11 chr2 231728563 231728738 -21527845 - FRAM SINE Alu -4 172 1 567 247 92 11 chr2 231729801 231729975 -21526608 - MIR SINE MIR -42 220 33 521 237 85 17 chr2 231729977 231730154 -21526429 + MER5A DNA MER1_type 1 189 0 243 88 0 0 chr2 231730265 231730299 -21526284 + (T)n Simple_repeat Simple_repeat 1 34 0 248 200 0 0 chr2 231730341 231730386 -21526197 - FRAM/FAM SINE Alu -34 132 88 528 88 12 0 chr2 231730391 231730471 -21526112 + LTR1B LTR ERV1 1 81 -745 1128 174 127 70 chr2 231730487 231730920 -21525663 + LTR1B LTR ERV1 332 785 0 595 178 0 0 chr2 231730920 231731010 -21525573 - FRAM/FAM SINE Alu -86 90 1 624 276 72 27 chr2 231732153 231732374 -21524209 - MIR SINE MIR 0 262 32 2176 138 0 0 chr2 231733830 231734142 -21522441 - AluSx SINE Alu 0 312 1 750 196 101 0 chr2 231734160 231734349 -21522234 - MER3 DNA MER1_type 0 209 2 2316 83 0 3 chr2 231734392 231734694 -21521889 + AluY SINE Alu 1 301 -10 24 32 0 0 chr2 231735089 231735120 -21521463 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr2 231735267 231735288 -21521295 + AT_rich Low_complexity Low_complexity 1 21 0 268 250 213 15 chr2 231735358 231735494 -21521089 - MIR SINE MIR -98 164 2 32 0 0 0 chr2 231735518 231735550 -21521033 + AT_rich Low_complexity Low_complexity 1 32 0 252 200 0 0 chr2 231735604 231735659 -21520924 + (TA)n Simple_repeat Simple_repeat 2 56 0 2056 122 7 3 chr2 231736906 231737226 -21519357 - AluSq SINE Alu 0 321 1 751 101 0 0 chr2 231739263 231739362 -21517221 + AluSq/x SINE Alu 53 151 -162 367 321 9 0 chr2 231739632 231739738 -21516845 + MIR SINE MIR 32 138 -70 303 232 48 16 chr2 231739759 231739884 -21516699 + MER113 DNA MER1_type? 81 209 -312 2012 141 0 0 chr2 231740016 231740300 -21516283 + AluSx SINE Alu 1 284 -28 228 153 51 34 chr2 231741132 231741191 -21515392 + MER113 DNA MER1_type? 336 395 -126 2259 92 0 14 chr2 231742979 231743274 -21513309 + AluSx SINE Alu 1 291 -21 226 244 67 56 chr2 231743515 231743605 -21512978 + MIR SINE MIR 61 151 -57 385 269 156 21 chr2 231744101 231744287 -21512296 - MIR SINE MIR -5 257 47 470 226 0 8 chr2 231746796 231746929 -21509654 + GA-rich Low_complexity Low_complexity 2 133 0 189 0 0 0 chr2 231748372 231748393 -21508190 + (CA)n Simple_repeat Simple_repeat 1 21 0 261 98 0 0 chr2 231748634 231748675 -21507908 + (CA)n Simple_repeat Simple_repeat 2 42 0 775 273 119 8 chr2 231749908 231750377 -21506206 + MER113 DNA MER1_type? 1 521 0 488 231 37 49 chr2 231754611 231754830 -21501753 + MLT1J2 LTR MaLR 39 257 -189 243 200 10 100 chr2 231754826 231754926 -21501657 + MLT1J1 LTR MaLR 318 408 -38 * 420 316 113 0 chr2 231755514 231755682 -21500901 - MIR SINE MIR -71 191 5 944 264 61 4 chr2 231755705 231755936 -21500647 - MIR SINE MIR -6 256 13 313 258 48 24 chr2 231756318 231756442 -21500141 + L1ME3A LINE L1 6044 6170 0 297 135 0 0 chr2 231759393 231759445 -21497138 + (GA)n Simple_repeat Simple_repeat 1 52 0 26 0 0 0 chr2 231760052 231760078 -21496505 + AT_rich Low_complexity Low_complexity 1 26 0 186 43 0 0 chr2 231760305 231760328 -21496255 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 24 32 0 0 chr2 231761374 231761405 -21495178 + AT_rich Low_complexity Low_complexity 1 31 0 201 74 0 0 chr2 231762630 231762657 -21493926 + (A)n Simple_repeat Simple_repeat 1 27 0 1917 153 0 7 chr2 231763965 231764253 -21492330 - AluSx SINE Alu -26 286 1 1105 261 37 3 chr2 231764641 231764967 -21491616 - MER58B DNA MER1_type -4 337 1 1528 144 8 8 chr2 231765019 231765262 -21491321 + AluSx SINE Alu 1 243 -69 272 230 48 95 chr2 231765582 231765708 -21490875 + MER69A DNA AcHobo 54 173 -4 266 0 29 0 chr2 231766124 231766158 -21490425 + (TTA)n Simple_repeat Simple_repeat 2 36 0 659 181 147 73 chr2 231766468 231766672 -21489911 - MER20 DNA MER1_type 0 219 1 228 250 19 0 chr2 231766891 231766943 -21489640 - MIR3 SINE MIR -6 202 150 216 200 0 0 chr2 231767801 231767846 -21488737 + (CCTG)n Simple_repeat Simple_repeat 4 48 0 213 39 0 0 chr2 231769123 231769149 -21487434 + (CACCC)n Simple_repeat Simple_repeat 1 26 0 2187 101 0 14 chr2 231770468 231770756 -21485827 + AluSg SINE Alu 17 300 -10 1429 160 0 25 chr2 231771055 231771293 -21485290 - AluJb SINE Alu -80 232 1 30 0 0 0 chr2 231772511 231772541 -21484042 + AT_rich Low_complexity Low_complexity 1 30 0 324 0 0 0 chr2 231772583 231772619 -21483964 + (TG)n Simple_repeat Simple_repeat 1 36 0 1666 149 65 0 chr2 231772619 231772881 -21483702 - AluSx SINE Alu -33 279 1 208 333 53 0 chr2 231773654 231773729 -21482854 + L2 LINE L2 3193 3271 -1 442 352 15 20 chr2 231773732 231773928 -21482655 - MIR3 SINE MIR -4 204 10 2152 87 14 24 chr2 231775530 231775859 -21480724 + AluSx SINE Alu 1 326 0 314 159 130 0 chr2 231776718 231776787 -21479796 - MADE1 DNA Mariner 0 80 3 844 204 9 64 chr2 231777068 231777288 -21479295 - MER58A DNA MER1_type 0 224 17 1757 192 0 0 chr2 231778138 231778429 -21478154 + AluJb SINE Alu 1 291 -21 2302 101 0 0 chr2 231778718 231779014 -21477569 - AluSc SINE Alu -13 296 1 217 286 0 0 chr2 231779164 231779220 -21477363 + GA-rich Low_complexity Low_complexity 3 58 0 290 283 33 33 chr2 231779845 231779937 -21476646 - MIR SINE MIR -90 172 81 710 301 169 36 chr2 231781266 231781956 -21474627 - L2 LINE L2 0 3313 2510 453 325 41 24 chr2 231781987 231782153 -21474430 - L2 LINE L2 -1210 2104 1929 2028 120 28 3 chr2 231782153 231782437 -21474146 + AluSx SINE Alu 1 291 -21 453 325 41 24 chr2 231782437 231782565 -21474018 - L2 LINE L2 -1385 1929 1805 217 258 159 76 chr2 231782590 231782722 -21473861 - MIR3 SINE MIR -52 156 14 958 221 5 5 chr2 231782772 231782976 -21473607 - MER3 DNA MER1_type -1 208 5 1021 276 84 42 chr2 231783228 231783271 -21473312 + MLT1E LTR MaLR 17 57 -536 2254 124 0 0 chr2 231783271 231783577 -21473006 - AluSq SINE Alu -7 306 1 1021 276 84 42 chr2 231783577 231783960 -21472623 + MLT1E LTR MaLR 57 461 -132 2636 84 36 8 chr2 231783963 231784354 -21472229 + MLT2A1 LTR ERVL 3 404 -40 248 211 25 31 chr2 231784366 231784527 -21472056 + (TA)n Simple_repeat Simple_repeat 1 160 0 271 57 0 0 chr2 231784527 231784562 -21472021 + MLT2A1 LTR ERVL 419 453 0 * 696 210 7 0 chr2 231784562 231784699 -21471884 + MLT1F LTR MaLR 405 542 0 319 16 78 16 chr2 231784968 231785032 -21471551 + (TTTA)n Simple_repeat Simple_repeat 4 71 0 2011 114 4 0 chr2 231785032 231785303 -21471280 - AluSx SINE Alu -40 272 1 1801 113 18 0 chr2 231785312 231785595 -21470988 - L1PA13 LINE L1 -1 6162 5875 2524 61 0 6 chr2 231787070 231787402 -21469181 - AluY SINE Alu 0 330 1 247 277 229 30 chr2 231788020 231788186 -21468397 - MIR SINE MIR -10 252 54 2011 137 7 0 chr2 231788487 231788787 -21467796 - AluSc SINE Alu -7 302 1 237 108 0 0 chr2 231788862 231788899 -21467684 + (G)n Simple_repeat Simple_repeat 1 37 0 2300 103 3 0 chr2 231789207 231789508 -21467075 - AluSc SINE Alu -7 302 1 204 289 0 0 chr2 231790402 231790454 -21466129 + MIR SINE MIR 98 149 -113 1975 171 0 7 chr2 231790553 231791036 -21465547 - AluSx SINE Alu 0 312 1 216 0 0 0 chr2 231791435 231791459 -21465124 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 642 300 41 9 chr2 231794158 231794378 -21462205 - MIR SINE MIR -29 233 7 361 278 135 39 chr2 231794719 231794770 -21461813 + MIR SINE MIR 11 56 -206 1688 188 13 3 chr2 231794770 231795073 -21461510 - AluJb SINE Alu -6 306 1 361 278 135 39 chr2 231795073 231795251 -21461332 + MIR SINE MIR 56 262 0 230 332 82 50 chr2 231795846 231795927 -21460656 + MIR SINE MIR 9 86 -176 2036 133 19 33 chr2 231795927 231796287 -21460296 + THE1A LTR MaLR 1 355 0 230 332 82 50 chr2 231796287 231796425 -21460158 + MIR SINE MIR 86 235 -27 1608 176 29 68 chr2 231796662 231797071 -21459512 - L1MC2 LINE L1 -8 6336 5944 3320 212 25 8 chr2 231797095 231798265 -21458318 - L1MC2 LINE L1 -11 6154 4978 512 225 113 83 chr2 231798980 231799097 -21457486 - MER5A DNA MER1_type 0 189 63 1128 200 36 36 chr2 231799097 231799372 -21457211 - ORSL DNA AcHobo 0 275 1 512 225 113 83 chr2 231799372 231799434 -21457149 - MER5A DNA MER1_type -126 63 4 1986 126 60 30 chr2 231799694 231800058 -21456525 - THE1C LTR MaLR 0 375 1 578 266 7 7 chr2 231800432 231800571 -21456012 + MER5A DNA MER1_type 1 139 -50 3226 77 25 0 chr2 231800586 231801028 -21455555 - L1PA8 LINE L1 -2 6170 5718 544 210 24 40 chr2 231801032 231801156 -21455427 - MER5B DNA MER1_type 0 178 57 856 160 0 0 chr2 231801158 231801289 -21455294 - AluJ SINE Alu -9 303 173 713 173 0 0 chr2 231801289 231801399 -21455184 - AluJ SINE Alu -199 113 4 2310 106 0 6 chr2 231801583 231801895 -21454688 - AluY SINE Alu -1 310 1 457 253 0 0 chr2 231802003 231802098 -21454485 + MER58 DNA MER1_type 1 95 -120 678 25 0 0 chr2 231802108 231802188 -21454395 + (GAA)n Simple_repeat Simple_repeat 2 81 0 315 233 27 0 chr2 231802189 231802262 -21454321 + MER58 DNA MER1_type 2343 2417 -3 2176 106 0 0 chr2 231802419 231802731 -21453852 + AluY SINE Alu 1 312 0 465 349 56 15 chr2 231803087 231803356 -21453227 + L2 LINE L2 3027 3306 -7 258 56 0 0 chr2 231803377 231803413 -21453170 + (A)n Simple_repeat Simple_repeat 1 36 0 313 333 54 16 chr2 231807424 231807553 -21449030 - MIR SINE MIR -52 210 77 704 228 31 45 chr2 231807862 231808151 -21448432 + MER33 DNA MER1_type 18 302 -22 472 294 85 40 chr2 231808775 231808976 -21447607 - MIR SINE MIR -32 230 21 434 312 23 35 chr2 231809041 231809214 -21447369 + MIR SINE MIR 92 262 0 199 352 42 33 chr2 231810345 231810501 -21446082 - MIR SINE MIR -81 181 30 284 197 53 0 chr2 231811143 231811219 -21445364 - MER112 DNA MER1_type -47 213 134 319 315 56 35 chr2 231812399 231812596 -21443987 + MLT1J LTR MaLR 111 311 -200 245 143 0 0 chr2 231813014 231813049 -21443534 + MIR SINE MIR 222 256 -6 219 69 0 0 chr2 231815561 231815590 -21440993 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 957 253 143 6 chr2 231815856 231816184 -21440399 + MER69 DNA AcHobo 20 392 -834 571 226 139 10 chr2 231816216 231816547 -21440036 + MER69 DNA AcHobo 1912 2308 -218 434 250 15 0 chr2 231816574 231816706 -21439877 + MER69 DNA AcHobo 2384 2517 -9 686 130 23 61 chr2 231816771 231816902 -21439681 + FLAM_C SINE Alu 1 126 -7 543 213 8 0 chr2 231816935 231817057 -21439526 - MER45A DNA AcHobo 0 178 56 2509 92 19 3 chr2 231817405 231817774 -21438809 + THE1C LTR MaLR 1 375 0 251 170 21 0 chr2 231818579 231818626 -21437957 - MER5B DNA MER1_type -8 170 123 330 289 198 0 chr2 231818652 231818773 -21437810 + MIR SINE MIR 8 152 -110 740 118 0 22 chr2 231820961 231821097 -21435486 + MER53 DNA DNA 1 133 -56 22 35 0 0 chr2 231821107 231821136 -21435447 + AT_rich Low_complexity Low_complexity 1 29 0 560 239 119 0 chr2 231821234 231821393 -21435190 + MIR SINE MIR 72 249 -13 2353 103 0 7 chr2 231821483 231821793 -21434790 - AluSx SINE Alu -4 308 1 25 0 0 0 chr2 231821795 231821820 -21434763 + AT_rich Low_complexity Low_complexity 1 25 0 648 236 6 25 chr2 231822382 231822543 -21434040 + MER5B DNA MER1_type 13 170 -8 215 305 279 0 chr2 231822615 231822805 -21433778 - MIR SINE MIR 0 262 20 213 222 19 0 chr2 231823434 231823488 -21433095 + (TTCA)n Simple_repeat Simple_repeat 3 57 0 409 296 77 67 chr2 231823489 231823786 -21432797 - L2 LINE L2 0 3313 3014 1534 183 68 10 chr2 231823821 231824116 -21432467 - AluJb SINE Alu 0 312 1 304 273 64 27 chr2 231824686 231824796 -21431787 - MIR3 SINE MIR -93 115 2 834 236 122 51 chr2 231824984 231825319 -21431264 - L2 LINE L2 -8 3305 2947 292 330 87 0 chr2 231826631 231826734 -21429849 - MIR SINE MIR -139 123 12 264 145 0 171 chr2 231826916 231826965 -21429618 - MER5A DNA MER1_type -126 63 30 2396 89 0 0 chr2 231826965 231827267 -21429316 - AluSq SINE Alu -11 302 1 264 145 0 171 chr2 231827267 231827293 -21429290 - MER5A DNA MER1_type -159 30 1 209 343 28 14 chr2 231830162 231830305 -21426278 - L3b LINE CR1 -325 1258 1114 2170 83 7 0 chr2 231830537 231830850 -21425733 + AluSc SINE Alu 1 315 0 2356 97 7 0 chr2 231831432 231831740 -21424843 + AluSx SINE Alu 1 310 -2 2014 139 0 0 chr2 231832918 231833205 -21423378 + AluSx SINE Alu 1 287 -25 186 133 0 0 chr2 231833273 231833303 -21423280 + (TG)n Simple_repeat Simple_repeat 2 31 0 711 266 112 71 chr2 231833445 231833893 -21422690 - MLT1H LTR MaLR -4 545 80 320 330 144 20 chr2 231834332 231834629 -21421954 + L1ME3A LINE L1 4742 5091 -1055 2357 114 0 0 chr2 231834629 231834935 -21421648 - AluSq SINE Alu -7 306 1 320 330 144 20 chr2 231834935 231834992 -21421591 + L1ME3A LINE L1 5091 5140 -1006 907 182 38 25 chr2 231834993 231835152 -21421431 - AluJb SINE Alu -23 289 129 956 120 5 0 chr2 231835154 231835373 -21421210 + (TA)n Simple_repeat Simple_repeat 1 220 0 753 161 8 0 chr2 231835377 231835501 -21421082 - AluJb SINE Alu -187 125 1 358 303 124 20 chr2 231835523 231836128 -21420455 + L1ME3A LINE L1 5297 5964 -206 22 56 0 0 chr2 231836447 231836483 -21420100 + AT_rich Low_complexity Low_complexity 1 36 0 1639 170 9 53 chr2 231836504 231836827 -21419756 + AluJb SINE Alu 1 309 -3 26 50 0 0 chr2 231837543 231837583 -21419000 + AT_rich Low_complexity Low_complexity 1 40 0 2031 231 30 6 chr2 231838246 231838739 -21417844 + MLT1D LTR MaLR 1 505 0 1890 156 19 7 chr2 231840121 231840429 -21416154 - AluSx SINE Alu 0 312 1 209 200 0 0 chr2 231840617 231840652 -21415931 + (TATG)n Simple_repeat Simple_repeat 2 36 0 893 206 109 69 chr2 231842198 231842547 -21414036 - MLT1B LTR MaLR -27 363 1 235 220 34 0 chr2 231843421 231843480 -21413103 + (TATG)n Simple_repeat Simple_repeat 4 64 0 4567 49 0 12 chr2 231843986 231844559 -21412024 + L1PA5 LINE L1 5589 6154 0 2230 83 42 7 chr2 231844651 231844940 -21411643 + AluY SINE Alu 1 299 -12 1587 190 22 0 chr2 231845444 231845765 -21410818 + L1MC1 LINE L1 6001 6328 -5 2268 108 7 3 chr2 231845766 231846071 -21410512 - AluSp SINE Alu -3 310 5 378 228 43 0 chr2 231846101 231846193 -21410390 + MER21B LTR ERV1 1 96 -767 12708 183 24 8 chr2 231846229 231850033 -21406550 + L1MA8 LINE L1 2425 6286 -5 674 193 41 0 chr2 231850075 231850220 -21406363 + MER21B LTR ERV1 98 248 -615 1057 233 52 52 chr2 231850264 231850607 -21405976 + MER21B LTR ERV1 348 690 -173 379 192 51 0 chr2 231850610 231850688 -21405895 + MER21B LTR ERV1 658 739 -124 721 225 75 28 chr2 231851757 231852193 -21404390 - LTR56 LTR ERV1 -7 569 12 196 175 100 0 chr2 231852713 231852753 -21403830 + MIR SINE MIR 33 76 -186 380 283 66 0 chr2 231852970 231853076 -21403507 - L2 LINE L2 -14 3299 3187 692 187 72 7 chr2 231853174 231853313 -21403270 - MIR SINE MIR -33 229 82 2273 119 0 0 chr2 231853363 231853665 -21402918 + AluY SINE Alu 1 302 -9 280 254 15 82 chr2 231854795 231854929 -21401654 - L2 LINE L2 -1839 1475 1351 529 309 42 92 chr2 231854933 231855105 -21401478 - L2 LINE L2 -2068 1246 1097 2023 133 0 14 chr2 231855105 231855451 -21401132 - AluSx SINE Alu 0 342 1 529 309 42 92 chr2 231855451 231855614 -21400969 - L2 LINE L2 -2217 1097 927 196 245 20 0 chr2 231855614 231855663 -21400920 - L2 LINE L2 -2512 802 753 439 288 32 22 chr2 231855666 231855848 -21400735 - MIR SINE MIR -55 207 17 431 328 48 37 chr2 231857693 231857961 -21398622 + L3b LINE CR1 1102 1372 -211 226 65 22 22 chr2 231858159 231858205 -21398378 + (TA)n Simple_repeat Simple_repeat 1 46 0 264 137 0 0 chr2 231858626 231858677 -21397906 + (TA)n Simple_repeat Simple_repeat 2 52 0 426 280 76 23 chr2 231859189 231859321 -21397262 - MIR SINE MIR -60 202 64 351 78 0 0 chr2 231859388 231859439 -21397144 + (CA)n Simple_repeat Simple_repeat 2 52 0 228 108 0 0 chr2 231859455 231859492 -21397091 - AluSx SINE Alu -7 295 259 989 188 0 0 chr2 231859492 231859652 -21396931 - AluSx SINE Alu -152 160 1 1906 175 7 0 chr2 231860647 231860955 -21395628 + AluJb SINE Alu 1 310 -2 904 176 58 0 chr2 231861054 231861242 -21395341 - MER3 DNA MER1_type -10 199 1 313 280 12 12 chr2 231862721 231862815 -21393768 + MIR SINE MIR 56 148 -63 1346 211 9 47 chr2 231863036 231863112 -21393471 + MER58B DNA MER1_type 11 88 -2332 4861 116 10 4 chr2 231863112 231863172 -21393411 + L1PA14 LINE L1 5432 5490 -671 2529 67 0 6 chr2 231863172 231863485 -21393098 + AluY SINE Alu 1 311 0 4861 116 10 4 chr2 231863485 231864150 -21392433 + L1PA14 LINE L1 5490 6161 0 1346 211 9 47 chr2 231864150 231864414 -21392169 + MER58B DNA MER1_type 88 338 -3 245 343 20 41 chr2 231864418 231864472 -21392111 + L2 LINE L2 2945 2999 -273 2081 125 133 23 chr2 231864472 231864863 -21391720 - Tigger2a DNA MER2_type 0 434 1 245 343 20 41 chr2 231864863 231864954 -21391629 + L2 LINE L2 2999 3087 -185 194 273 36 0 chr2 231864958 231865013 -21391570 + L2 LINE L2 3257 3313 0 466 222 181 7 chr2 231865204 231865348 -21391235 + MLT1H LTR MaLR 381 549 0 325 284 80 70 chr2 231867640 231867841 -21388742 + MER102a DNA MER1_type 118 320 -10 492 257 179 11 chr2 231868990 231869169 -21387414 - MIR SINE MIR -2 260 52 510 171 11 123 chr2 231869246 231869433 -21387150 + MER3 DNA MER1_type 1 166 -43 2067 130 13 7 chr2 231869442 231869750 -21386833 - AluSg SINE Alu 0 310 1 297 236 71 79 chr2 231870262 231870402 -21386181 + L2 LINE L2 3169 3307 -6 225 240 135 52 chr2 231870599 231870695 -21385888 - MIR3 SINE MIR -18 190 87 2332 95 0 7 chr2 231871149 231871455 -21385128 - AluSc SINE Alu -5 304 1 260 330 45 0 chr2 231871503 231871591 -21384992 - MIR SINE MIR -74 188 97 384 222 71 24 chr2 231871866 231872003 -21384580 - MIR SINE MIR -65 143 45 2046 130 11 0 chr2 231872575 231872859 -21383724 + AluSx SINE Alu 1 287 -25 234 0 0 0 chr2 231872859 231872885 -21383698 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 369 226 11 21 chr2 231873440 231873533 -21383050 + MER5A DNA MER1_type 9 100 -89 2058 136 10 0 chr2 231873638 231873939 -21382644 - AluJb SINE Alu -8 304 1 2682 35 0 0 chr2 231873949 231874260 -21382323 - AluY SINE Alu 0 311 1 24 67 0 0 chr2 231874392 231874437 -21382146 + AT_rich Low_complexity Low_complexity 1 45 0 21 0 0 0 chr2 231874659 231874680 -21381903 + AT_rich Low_complexity Low_complexity 1 21 0 299 292 39 15 chr2 231874997 231875127 -21381456 - MIR SINE MIR -56 206 74 276 206 21 10 chr2 231877362 231877459 -21379124 + GA-rich Low_complexity Low_complexity 3 100 0 2245 79 3 13 chr2 231877540 231877857 -21378726 - THE1C LTR MaLR 0 375 62 476 325 99 14 chr2 231878763 231878975 -21377608 + MIR SINE MIR 33 262 0 345 343 99 0 chr2 231878980 231879193 -21377390 - L1ME4a LINE L1 -221 5900 5667 530 291 19 0 chr2 231879740 231879898 -21376685 - L1ME4a LINE L1 -480 5641 5481 251 299 11 0 chr2 231880027 231880114 -21376469 + (TA)n Simple_repeat Simple_repeat 1 88 0 197 387 0 0 chr2 231880531 231880593 -21375990 + L2 LINE L2 3150 3211 -61 183 100 0 0 chr2 231880942 231880972 -21375611 + (T)n Simple_repeat Simple_repeat 1 30 0 180 111 0 0 chr2 231881645 231881672 -21374911 + (TGG)n Simple_repeat Simple_repeat 1 27 0 360 0 0 0 chr2 231881674 231881714 -21374869 + (TG)n Simple_repeat Simple_repeat 1 40 0 208 254 0 0 chr2 231882653 231882708 -21373875 + (TA)n Simple_repeat Simple_repeat 2 56 0 2555 49 0 10 chr2 231882717 231883025 -21373558 + AluY SINE Alu 1 305 -6 216 0 0 0 chr2 231884744 231884768 -21371815 + (CA)n Simple_repeat Simple_repeat 2 25 0 220 127 25 38 chr2 231884939 231884945 -21371638 + (TA)n Simple_repeat Simple_repeat 2 7 -72 2113 109 32 0 chr2 231884945 231885229 -21371354 + AluSx SINE Alu 1 293 -19 220 127 25 38 chr2 231885229 231885301 -21371282 + (TA)n Simple_repeat Simple_repeat 7 79 0 22 0 0 0 chr2 231885330 231885352 -21371231 + AT_rich Low_complexity Low_complexity 1 22 0 231 170 0 0 chr2 231890005 231890052 -21366531 + (CATAT)n Simple_repeat Simple_repeat 3 49 0 534 298 25 19 chr2 231890947 231891105 -21365478 + L2 LINE L2 3155 3313 0 1805 189 0 10 chr2 231891171 231891473 -21365110 + AluJb SINE Alu 1 299 -13 180 0 0 0 chr2 231891515 231891535 -21365048 + (TAA)n Simple_repeat Simple_repeat 2 21 0 195 129 0 0 chr2 231891569 231891600 -21364983 + (A)n Simple_repeat Simple_repeat 1 31 0 770 192 86 0 chr2 231893180 231893331 -21363252 + AluSg/x SINE Alu 137 300 -12 210 162 0 0 chr2 231894753 231894790 -21361793 + A-rich Low_complexity Low_complexity 1 37 0 2137 129 0 10 chr2 231895633 231895942 -21360641 + AluSx SINE Alu 2 307 -5 207 0 0 0 chr2 231896312 231896335 -21360248 + (A)n Simple_repeat Simple_repeat 1 23 0 338 200 40 0 chr2 231896703 231896778 -21359805 + MER5A DNA MER1_type 25 102 -87 739 251 72 0 chr2 231897532 231897727 -21358856 + MER3 DNA MER1_type 1 209 0 2287 105 0 3 chr2 231897936 231898232 -21358351 + AluSq SINE Alu 1 295 -18 259 304 96 17 chr2 231898248 231898363 -21358220 + MER5B DNA MER1_type 5 128 -50 367 271 117 37 chr2 231898478 231898666 -21357917 - MIR SINE MIR -6 256 54 1955 131 24 14 chr2 231898767 231899064 -21357519 + AluSx SINE Alu 1 300 -12 1092 177 0 0 chr2 231899915 231900090 -21356493 - AluJb SINE Alu -3 309 134 2085 129 10 10 chr2 231900090 231900400 -21356183 - AluSx SINE Alu -2 310 1 281 92 0 53 chr2 231900503 231900579 -21356004 + (TAAAA)n Simple_repeat Simple_repeat 4 75 0 349 236 97 42 chr2 231900621 231900765 -21355818 + MIR SINE MIR 83 234 -28 378 0 0 0 chr2 231901026 231901068 -21355515 + (TA)n Simple_repeat Simple_repeat 2 43 0 2313 97 3 0 chr2 231901068 231901367 -21355216 - AluSq SINE Alu -13 300 1 253 247 124 0 chr2 231901434 231901531 -21355052 - MIR SINE MIR -74 188 80 525 339 83 4 chr2 231902749 231902979 -21353604 - MIR SINE MIR -9 253 6 195 42 0 0 chr2 231905656 231905680 -21350903 + (GGA)n Simple_repeat Simple_repeat 1 24 0 225 0 0 0 chr2 231905851 231905876 -21350707 + (TA)n Simple_repeat Simple_repeat 1 25 0 537 245 86 33 chr2 231906029 231906180 -21350403 - MIR SINE MIR -56 206 48 1040 197 77 32 chr2 231906405 231906629 -21349954 + MER33 DNA MER1_type 1 245 -2340 2106 114 7 4 chr2 231906629 231906933 -21349650 - AluSq SINE Alu 0 307 3 1040 197 77 32 chr2 231906933 231907017 -21349566 + MER33 DNA MER1_type 245 324 0 216 204 74 0 chr2 231907744 231907798 -21348785 - MIR SINE MIR -116 146 89 1383 194 87 14 chr2 231908059 231908415 -21348168 - MER58D DNA MER1_type 0 386 5 660 179 56 118 chr2 231909221 231909416 -21347167 - MER5A DNA MER1_type -6 183 1 2118 128 3 3 chr2 231909608 231909913 -21346670 + AluSx SINE Alu 1 305 -7 22 0 0 0 chr2 231909945 231909967 -21346616 + AT_rich Low_complexity Low_complexity 1 22 0 2217 101 3 0 chr2 231910358 231910646 -21345937 + AluSp SINE Alu 1 289 -24 416 301 92 46 chr2 231911143 231911296 -21345287 + MIR SINE MIR 4 163 -45 2382 105 11 86 chr2 231912525 231912981 -21343602 + MER57B LTR ERV1 1 422 -12 2267 104 3 0 chr2 231916407 231916706 -21339877 - AluSp SINE Alu -13 300 1 1758 166 3 17 chr2 231916851 231917146 -21339437 + AluJb SINE Alu 11 301 -11 2140 114 10 0 chr2 231917664 231917963 -21338620 - AluSx SINE Alu -10 302 1 185 298 167 65 chr2 231918319 231918487 -21338096 - L2 LINE L2 -1 3271 3087 416 310 217 3 chr2 231918540 231918872 -21337711 - L2 LINE L2 -340 2974 2572 621 71 0 48 chr2 231920880 231920964 -21335619 + MADE1 DNA Mariner 1 80 0 270 0 0 0 chr2 231921818 231921848 -21334735 + (CA)n Simple_repeat Simple_repeat 1 30 0 251 93 23 0 chr2 231921848 231921891 -21334692 + (GA)n Simple_repeat Simple_repeat 1 44 0 845 168 6 0 chr2 231925429 231925608 -21330975 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 211 333 0 9 chr2 231925847 231925952 -21330631 + G-rich Low_complexity Low_complexity 4 107 0 1355 318 64 16 chr2 231926265 231926887 -21329696 - L3 LINE CR1 -300 1277 626 224 196 89 0 chr2 231926887 231926943 -21329640 - L3 LINE CR1 -1091 486 426 2108 121 7 0 chr2 231927080 231927377 -21329206 + AluSx SINE Alu 1 299 -13 2236 183 17 3 chr2 231927499 231927855 -21328728 + MLT1A1 LTR MaLR 5 365 0 939 111 0 8 chr2 231928010 231928136 -21328447 - AluSp SINE Alu -188 125 1 1876 139 39 11 chr2 231928154 231928435 -21328148 - AluSx SINE Alu -23 289 1 501 309 95 0 chr2 231930573 231930783 -21325800 - MIR SINE MIR 0 262 33 453 320 36 10 chr2 231930763 231930957 -21325626 - MIR SINE MIR -35 227 29 * 2254 104 0 19 chr2 231931114 231931432 -21325151 + AluSx SINE Alu 1 312 0 865 246 62 8 chr2 231931973 231932534 -21324049 - L1M2 LINE L1 -4068 3498 2892 * 9132 108 7 0 chr2 231932533 231933770 -21322813 - THE1B-int LTR MaLR -334 1246 1 2284 159 5 27 chr2 231933770 231934142 -21322441 - THE1B LTR MaLR 0 364 1 6494 172 51 44 chr2 231934142 231936103 -21320480 + L1MA4 LINE L1 3967 5949 -351 1603 209 3 7 chr2 231936103 231936399 -21320184 + AluJo SINE Alu 1 295 -17 6494 172 51 44 chr2 231936399 231936701 -21319882 + L1MA4 LINE L1 5949 6247 -53 301 300 0 22 chr2 231937797 231937887 -21318696 - L2 LINE L2 -35 3237 3150 2568 206 75 6 chr2 231937906 231938429 -21318154 - MER89 LTR ERV1 0 559 1 510 114 0 25 chr2 231938474 231938553 -21318030 - L1PA5 LINE L1 -2 6152 6076 1015 80 22 0 chr2 231938560 231938698 -21317885 + L1PA6 LINE L1 5928 6068 -86 587 339 42 8 chr2 231938773 231939012 -21317571 - MIR SINE MIR 0 262 16 202 400 60 37 chr2 231942814 231943216 -21313367 - L2 LINE L2 -350 2964 2554 598 270 73 22 chr2 231943620 231943798 -21312785 + MIR SINE MIR 32 218 -44 692 283 138 35 chr2 231943973 231944408 -21312175 - L2 LINE L2 0 3313 2834 1145 173 93 76 chr2 231944468 231944769 -21311814 - MER33 DNA MER1_type -17 307 2 234 333 0 0 chr2 231944781 231944862 -21311721 - L2 LINE L2 -508 2806 2726 21 0 0 0 chr2 231945103 231945124 -21311459 + AT_rich Low_complexity Low_complexity 1 21 0 352 284 187 0 chr2 231945820 231945975 -21310608 + MER5A DNA MER1_type 4 187 -2 307 314 99 50 chr2 231946066 231946308 -21310275 - L2 LINE L2 -27 3245 2992 271 221 26 39 chr2 231947899 231947976 -21308607 + MIR SINE MIR 81 156 -106 344 352 103 33 chr2 231948342 231948782 -21307801 - L2 LINE L2 -220 3052 2588 215 326 43 22 chr2 231949291 231949429 -21307154 - L2 LINE L2 -736 2578 2438 2109 145 0 0 chr2 231949640 231949943 -21306640 + AluSq SINE Alu 1 303 -10 222 91 0 0 chr2 231951529 231951562 -21305021 + (TAA)n Simple_repeat Simple_repeat 1 33 0 306 319 35 0 chr2 231952103 231952216 -21304367 + MER70B LTR ERVL 445 561 -17 254 196 143 45 chr2 231952514 231952626 -21303957 - LTR16C LTR ERVL 0 491 369 307 264 16 93 chr2 231952966 231953095 -21303488 - L1ME4a LINE L1 -36 6085 5967 486 301 75 63 chr2 231953118 231953716 -21302867 - L1ME4a LINE L1 -235 5886 5282 29 78 0 0 chr2 231953723 231953787 -21302796 + AT_rich Low_complexity Low_complexity 1 64 0 2097 133 3 3 chr2 231954137 231954446 -21302137 + AluSc SINE Alu 1 309 0 23 0 0 0 chr2 231954856 231954879 -21301704 + AT_rich Low_complexity Low_complexity 1 23 0 193 333 0 35 chr2 231954879 231954966 -21301617 - MIR SINE MIR -105 103 20 21 0 0 0 chr2 231955056 231955077 -21301506 + AT_rich Low_complexity Low_complexity 1 21 0 32 0 0 0 chr2 231955896 231955928 -21300655 + AT_rich Low_complexity Low_complexity 1 32 0 2005 112 0 14 chr2 231956064 231956365 -21300218 + AluSx SINE Alu 11 307 0 599 90 0 0 chr2 231956557 231956635 -21299948 - THE1B LTR MaLR -286 78 1 241 234 78 0 chr2 231956711 231956775 -21299808 - MLT1K LTR MaLR -4 584 516 194 254 102 17 chr2 231957579 231957638 -21298945 - MIR SINE MIR -197 65 2 267 361 66 45 chr2 231957646 231957934 -21298649 - L2 LINE L2 -87 3185 2892 208 351 81 9 chr2 231958252 231958363 -21298220 - L2 LINE L2 -677 2637 2519 248 265 0 102 chr2 231958558 231958705 -21297878 - L1ME LINE L1 -298 5823 5692 31 0 0 0 chr2 231958916 231958947 -21297636 + AT_rich Low_complexity Low_complexity 1 31 0 212 312 0 52 chr2 231958955 231959032 -21297551 + L2 LINE L2 3241 3313 0 454 276 192 20 chr2 231959483 231959686 -21296897 + MIR SINE MIR 12 249 -13 387 257 196 14 chr2 231959855 231960003 -21296580 + MER5A DNA MER1_type 9 183 -6 405 264 129 80 chr2 231960166 231960492 -21296091 + MLT1L LTR MaLR 201 542 -73 1125 249 131 59 chr2 231960505 231961016 -21295567 + MER77 LTR ERV1 54 601 -4 5699 193 72 25 chr2 231961180 231962519 -21294064 - Charlie1a DNA MER1_type 0 1455 54 359 266 119 21 chr2 231962794 231962937 -21293646 + MIR SINE MIR 106 262 0 24 0 0 0 chr2 231963413 231963437 -21293146 + AT_rich Low_complexity Low_complexity 1 24 0 207 0 0 0 chr2 231964148 231964171 -21292412 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 359 309 181 37 chr2 231965417 231965825 -21290758 + L2 LINE L2 2839 3305 -8 592 277 184 11 chr2 231966149 231966416 -21290167 - L2 LINE L2 0 3313 3001 591 242 40 96 chr2 231966421 231966723 -21289860 - MLT1I LTR MaLR -8 401 117 498 322 166 7 chr2 231966798 231967087 -21289496 - L2 LINE L2 -311 3002 2669 255 31 0 0 chr2 231967254 231967286 -21289297 + (TG)n Simple_repeat Simple_repeat 2 33 0 515 290 50 54 chr2 231967968 231968285 -21288298 + L2 LINE L2 2470 2785 -529 210 150 0 0 chr2 231968292 231968332 -21288251 + (A)n Simple_repeat Simple_repeat 1 40 0 372 302 123 12 chr2 231968669 231969010 -21287573 - L1MEd LINE L1 -3388 2741 2363 372 280 41 55 chr2 231969207 231969697 -21286886 - L1MEd LINE L1 -4883 1236 754 419 322 69 63 chr2 231969894 231970242 -21286341 - L1MEd LINE L1 -5685 434 85 1226 245 123 68 chr2 231970242 231971137 -21285446 + L1MC4a LINE L1 5774 6717 -1091 707 126 8 8 chr2 231971336 231971455 -21285128 + L1PA15 LINE L1 6034 6152 -13 22 35 0 0 chr2 231971549 231971578 -21285005 + AT_rich Low_complexity Low_complexity 1 29 0 1876 172 0 0 chr2 231971881 231972177 -21284406 + AluJb SINE Alu 1 296 -16 197 33 33 0 chr2 231972286 231972316 -21284267 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2212 92 18 0 chr2 231972319 231972603 -21283980 - AluSq SINE Alu -24 289 1 682 131 7 73 chr2 231972909 231973046 -21283537 - FRAM SINE Alu -11 165 38 1933 156 64 12 chr2 231973968 231974314 -21282269 + THE1B LTR MaLR 1 364 0 1813 247 74 42 chr2 231974780 231975346 -21281237 - MLT1E LTR MaLR -9 584 1 652 235 84 46 chr2 231975409 231975647 -21280936 + MIR SINE MIR 3 249 -13 244 356 10 0 chr2 231975698 231975799 -21280784 - Charlie7 DNA MER1_type -2510 102 1 325 279 29 57 chr2 231975859 231975999 -21280584 - MIR3 SINE MIR -10 198 63 23 0 0 0 chr2 231976602 231976625 -21279958 + AT_rich Low_complexity Low_complexity 1 23 0 296 47 0 23 chr2 231977090 231977133 -21279450 + (GAAA)n Simple_repeat Simple_repeat 3 44 0 599 253 30 84 chr2 231978361 231978423 -21278160 + MIR SINE MIR 2 66 -196 2407 107 33 6 chr2 231978423 231978788 -21277795 - THE1C LTR MaLR 0 375 1 599 253 30 84 chr2 231978788 231978962 -21277621 + MIR SINE MIR 66 225 -37 189 358 26 33 chr2 231979128 231979279 -21277304 - MER5A DNA MER1_type -2 187 38 432 171 214 64 chr2 231979315 231979455 -21277128 + MER5A DNA MER1_type 29 189 0 749 268 81 28 chr2 231979783 231980247 -21276336 + MLT2F LTR ERVL 42 571 -92 219 139 0 0 chr2 231980352 231980388 -21276195 + (TG)n Simple_repeat Simple_repeat 2 37 0 581 293 30 0 chr2 231980549 231980713 -21275870 - MIR SINE MIR 0 262 94 1061 68 0 47 chr2 231980744 231980892 -21275691 + AluSg/x SINE Alu 169 309 -1 296 172 75 11 chr2 231981013 231981106 -21275477 - L1ME4a LINE L1 -5 6116 6018 1918 186 0 0 chr2 231982619 231982920 -21273663 + AluJb SINE Alu 1 301 -11 209 283 0 0 chr2 231983146 231983199 -21273384 + CT-rich Low_complexity Low_complexity 1 53 0 872 220 0 5 chr2 231983609 231983795 -21272788 - L1ME4a LINE L1 -547 5617 5433 371 224 104 62 chr2 231984120 231984312 -21272271 + L1MC5 LINE L1 7715 7914 -47 2698 119 0 11 chr2 231984867 231985246 -21271337 - THE1C LTR MaLR 0 375 1 419 303 123 7 chr2 231985878 231986033 -21270550 - MIR3 SINE MIR -33 175 3 1407 146 114 50 chr2 231986212 231986493 -21270090 + AluSx SINE Alu 1 299 -13 200 355 33 8 chr2 231986813 231986934 -21269649 - MER5A DNA MER1_type 0 189 66 818 219 9 24 chr2 231987013 231987223 -21269360 - MER106A DNA MER1_type 0 236 30 688 206 142 50 chr2 231987415 231987634 -21268949 - MIR SINE MIR -21 241 3 381 316 7 33 chr2 231988322 231988474 -21268109 - MIR SINE MIR -15 247 100 982 187 10 10 chr2 231988480 231988678 -21267905 + MLT1A1 LTR MaLR 1 198 -167 907 239 0 0 chr2 231988675 231988859 -21267724 + MLT1A1 LTR MaLR 148 331 -34 * 298 40 0 40 chr2 231988859 231988909 -21267674 + (TTG)n Simple_repeat Simple_repeat 2 49 0 189 200 46 77 chr2 231988930 231988995 -21267588 - MIR SINE MIR -106 102 40 38 22 0 0 chr2 231989050 231989095 -21267488 + AT_rich Low_complexity Low_complexity 1 45 0 348 245 87 77 chr2 231989115 231989311 -21267272 - L2 LINE L2 -1 3312 3115 1910 155 0 7 chr2 231989881 231990189 -21266394 - AluSg SINE Alu 0 306 1 512 249 67 37 chr2 231990241 231990416 -21266167 - L1MC4a LINE L1 -1844 5964 5777 1777 189 0 17 chr2 231990416 231990712 -21265871 - AluJb SINE Alu -21 291 1 512 249 67 37 chr2 231990712 231990805 -21265778 - L1MC4a LINE L1 -2031 5777 5688 247 0 0 0 chr2 231990870 231990907 -21265676 + Alu SINE Alu 265 301 0 349 280 65 19 chr2 231990931 231991145 -21265438 - L1MC4a LINE L1 -2289 5519 5296 2361 104 48 20 chr2 231991864 231992218 -21264365 + THE1B LTR MaLR 1 364 0 281 342 47 34 chr2 231992575 231992724 -21263859 - L3 LINE CR1 -1385 192 42 200 340 10 31 chr2 231993884 231993981 -21262602 - MIR SINE MIR -109 153 59 796 235 0 6 chr2 231994217 231994379 -21262204 + MER63A DNA MER1_type 44 204 -6 218 388 0 0 chr2 231994558 231994625 -21261958 - L2 LINE L2 -97 3175 3109 911 187 0 0 chr2 231994782 231994932 -21261651 + FRAM SINE Alu 1 150 -26 260 327 27 27 chr2 231995112 231995222 -21261361 + MER5A DNA MER1_type 2 111 -78 559 296 67 38 chr2 231995961 231996201 -21260382 - MIR SINE MIR -10 252 6 21 36 0 0 chr2 231997747 231997775 -21258808 + AT_rich Low_complexity Low_complexity 1 28 0 2086 133 3 0 chr2 231997784 231998077 -21258506 - AluSg SINE Alu -16 294 1 187 340 0 0 chr2 231998155 231998202 -21258381 + L2 LINE L2 3007 3053 -219 363 286 84 19 chr2 232000242 232000396 -21256187 + MIR SINE MIR 34 197 -65 688 215 54 68 chr2 232000546 232000751 -21255832 - MER20 DNA MER1_type 0 219 18 1082 41 23 17 chr2 232002342 232002514 -21254069 + (GAAA)n Simple_repeat Simple_repeat 3 175 0 425 172 11 0 chr2 232002514 232002607 -21253976 + GA-rich Low_complexity Low_complexity 2 95 0 260 329 185 22 chr2 232003988 232004210 -21252373 - MIR SINE MIR -2 260 3 2037 110 83 9 chr2 232004222 232004549 -21252034 - THE1B LTR MaLR -13 351 1 194 157 0 20 chr2 232005772 232005823 -21250760 + (TA)n Simple_repeat Simple_repeat 2 51 0 23 54 0 0 chr2 232006454 232006491 -21250092 + AT_rich Low_complexity Low_complexity 1 37 0 1949 199 37 12 chr2 232006726 232006770 -21249813 + L1M4 LINE L1 4572 4613 -1533 261 0 0 0 chr2 232006770 232006799 -21249784 + (TG)n Simple_repeat Simple_repeat 2 30 0 1949 199 37 12 chr2 232006799 232007237 -21249346 + L1M4 LINE L1 4613 5066 -1080 180 250 0 0 chr2 232008299 232008335 -21248248 + MIR SINE MIR 107 142 -66 233 253 84 11 chr2 232008468 232008563 -21248020 + MER117 DNA MER1_type 11 112 -85 248 175 16 0 chr2 232009515 232009578 -21247005 + (TG)n Simple_repeat Simple_repeat 1 64 0 1892 129 23 50 chr2 232009948 232010099 -21246484 - THE1B LTR MaLR 0 364 211 2598 56 0 0 chr2 232010099 232010405 -21246178 - AluY SINE Alu -5 306 1 1892 129 23 50 chr2 232010405 232010595 -21245988 - THE1B LTR MaLR -153 211 32 236 290 65 0 chr2 232010611 232010673 -21245910 + L2 LINE L2 3247 3312 -1 194 194 0 0 chr2 232010807 232010843 -21245740 - MIR SINE MIR -137 71 36 282 243 140 0 chr2 232011724 232011776 -21244807 + L2 LINE L2 3187 3230 -83 2731 107 0 0 chr2 232011776 232012140 -21244443 + THE1B LTR MaLR 1 364 0 282 243 140 0 chr2 232012140 232012194 -21244389 + L2 LINE L2 3230 3308 -5 1043 198 14 27 chr2 232012227 232012449 -21244134 + MER20 DNA MER1_type 1 219 0 2412 134 63 22 chr2 232013874 232014285 -21242298 - MSTA LTR MaLR 0 428 1 413 307 129 10 chr2 232014301 232014497 -21242086 - MIR SINE MIR -12 250 35 1787 166 3 16 chr2 232014878 232015191 -21241392 - AluJo SINE Alu -3 309 1 2027 75 75 11 chr2 232015237 232015518 -21241065 + AluSc SINE Alu 1 299 -10 693 211 56 33 chr2 232015757 232015937 -21240646 + L1MD2 LINE L1 6047 6230 -129 971 201 50 119 chr2 232015995 232016373 -21240210 + MLT1A1 LTR MaLR 14 365 0 249 62 0 0 chr2 232016427 232016459 -21240124 - MLT2B2 LTR ERVL 0 515 484 349 232 11 0 chr2 232016460 232016555 -21240028 - MLT2B2 LTR ERVL -419 96 1 394 105 81 12 chr2 232016683 232016769 -21239814 - L1 LINE L1 -1320 4826 4735 4252 162 13 28 chr2 232016770 232017630 -21238953 + L1MA4 LINE L1 5448 6294 -6 27 29 0 0 chr2 232017630 232017664 -21238919 + AT_rich Low_complexity Low_complexity 1 34 0 232 237 53 88 chr2 232018037 232018151 -21238432 + MLT1H LTR MaLR 425 534 -15 311 393 27 0 chr2 232018178 232018290 -21238293 - L2 LINE L2 -5 3267 3153 23 33 0 0 chr2 232018369 232018399 -21238184 + AT_rich Low_complexity Low_complexity 1 30 0 274 308 84 67 chr2 232018758 232019057 -21237526 + L2 LINE L2 2559 2862 -452 456 299 122 0 chr2 232019088 232019235 -21237348 + MER96 DNA MER1_type? 1 165 -10 210 305 116 55 chr2 232019238 232019402 -21237181 + L2 LINE L2 2906 3079 -193 544 324 74 45 chr2 232019536 232020172 -21236411 + L2 LINE L2 2445 3101 -171 332 176 38 88 chr2 232020417 232020576 -21236007 - L1MC5 LINE L1 -198 7763 7613 201 226 94 0 chr2 232020630 232020683 -21235900 + L2 LINE L2 3254 3311 -2 336 326 15 0 chr2 232021461 232021593 -21234990 - L1ME LINE L1 -382 5739 5606 1737 128 21 102 chr2 232021597 232021932 -21234651 + AluYb8 SINE Alu 1 308 -10 241 231 67 29 chr2 232022053 232022157 -21234426 - L1ME4a LINE L1 -3 6118 6011 2075 107 0 0 chr2 232022951 232023255 -21233328 - AluSx SINE Alu 0 314 11 26 50 0 0 chr2 232023260 232023300 -21233283 + AT_rich Low_complexity Low_complexity 1 40 0 21 71 0 0 chr2 232024158 232024200 -21232383 + AT_rich Low_complexity Low_complexity 1 42 0 2465 61 3 0 chr2 232024757 232025053 -21231530 - AluY SINE Alu -14 297 1 22 35 0 0 chr2 232025065 232025094 -21231489 + AT_rich Low_complexity Low_complexity 1 29 0 372 329 141 46 chr2 232025566 232025849 -21230734 - HAL1b LINE L1 -594 754 445 819 196 70 10 chr2 232025948 232026147 -21230436 + MER58A DNA MER1_type 11 221 -3 1012 273 8 8 chr2 232027316 232027572 -21229011 - MIR SINE MIR -5 257 2 203 243 57 0 chr2 232028249 232028319 -21228264 - MIR SINE MIR -70 192 119 2001 131 6 13 chr2 232028788 232029100 -21227483 - AluSx SINE Alu -2 310 1 388 278 77 101 chr2 232029838 232030292 -21226291 - L1M4 LINE L1 -1322 4824 4382 23 33 0 0 chr2 232030296 232030326 -21226257 + AT_rich Low_complexity Low_complexity 1 30 0 308 286 9 99 chr2 232030355 232030568 -21226015 + L1M4c LINE L1 1515 1864 -879 489 304 63 43 chr2 232031081 232031298 -21225285 - MIR SINE MIR 0 262 38 807 192 9 76 chr2 232031298 232031522 -21225061 - MER3 DNA MER1_type 0 209 1 489 304 63 43 chr2 232031522 232031557 -21225026 - MIR SINE MIR -224 38 5 347 352 22 23 chr2 232031671 232031866 -21224717 + L1MB3 LINE L1 5406 5607 -514 2050 138 3 0 chr2 232031866 232032164 -21224419 + AluSx SINE Alu 1 299 -13 347 352 22 23 chr2 232032164 232032186 -21224397 + L1MB3 LINE L1 5607 5628 -493 294 50 0 0 chr2 232033059 232033099 -21223484 + (TG)n Simple_repeat Simple_repeat 2 41 0 1999 120 10 20 chr2 232033104 232033403 -21223180 - AluSx SINE Alu -15 297 2 353 179 26 0 chr2 232033596 232033713 -21222870 + L1M4c LINE L1 19 202 -6182 1686 167 30 72 chr2 232033714 232033828 -21222755 + L1M4c LINE L1 1806 1923 -4640 1426 199 42 25 chr2 232033828 232034114 -21222469 + AluJb SINE Alu 3 293 -19 1686 167 30 72 chr2 232034114 232034635 -21221948 + L1M4c LINE L1 1923 2561 -4002 2665 168 9 90 chr2 232034640 232035383 -21221200 + L1MA9 LINE L1 5596 6278 -34 1986 243 87 33 chr2 232035394 232035679 -21220904 + L1M4c LINE L1 2507 2775 -3607 1922 167 0 0 chr2 232035679 232035967 -21220616 + AluSx SINE Alu 1 288 -24 1986 243 87 33 chr2 232035967 232036529 -21220054 + L1M4c LINE L1 2775 3400 -2982 2051 130 38 6 chr2 232036530 232036876 -21219707 + L1MB3 LINE L1 5818 6174 -9 275 191 36 83 chr2 232037816 232037900 -21218683 - MIR SINE MIR -62 146 67 297 0 0 0 chr2 232037991 232038024 -21218559 + (TTTTG)n Simple_repeat Simple_repeat 5 37 0 1828 141 0 4 chr2 232038027 232038297 -21218286 - AluSx SINE Alu -37 275 7 192 77 0 0 chr2 232039583 232039609 -21216974 + (TTA)n Simple_repeat Simple_repeat 1 26 0 1038 239 0 0 chr2 232041331 232041549 -21215034 + MER58A DNA MER1_type 7 224 0 1756 177 6 25 chr2 232041736 232042052 -21214531 + AluJo SINE Alu 1 310 -2 2309 113 0 0 chr2 232042175 232042484 -21214099 + AluSg SINE Alu 1 309 -1 2313 102 0 13 chr2 232042923 232043238 -21213345 - AluSq SINE Alu -2 311 1 251 404 46 0 chr2 232043525 232043634 -21212949 + L2 LINE L2 3143 3256 -16 342 206 15 76 chr2 232043660 232043681 -21212902 + L2 LINE L2 2735 2756 -558 2398 102 0 0 chr2 232043681 232043984 -21212599 - AluSq SINE Alu -6 307 5 342 206 15 76 chr2 232043984 232044093 -21212490 + L2 LINE L2 2756 2857 -457 524 96 14 0 chr2 232044098 232044171 -21212412 + AluS SINE Alu 22 95 -217 623 270 187 36 chr2 232044174 232044559 -21212024 + L2 LINE L2 2871 3313 0 1657 160 98 28 chr2 232046671 232047027 -21209556 + MLT1B LTR MaLR 10 390 0 857 179 93 6 chr2 232047277 232047439 -21209144 + AluJo SINE Alu 123 298 -14 232 222 111 12 chr2 232047516 232047597 -21208986 + MLT1J LTR MaLR 36 124 -387 332 326 124 17 chr2 232047626 232047988 -21208595 + MLT1J LTR MaLR 110 510 -1 1395 267 84 20 chr2 232048133 232048695 -21207888 + L1ME3A LINE L1 5303 5900 -270 2176 118 6 10 chr2 232048911 232049225 -21207358 + AluSq SINE Alu 1 313 0 610 260 46 17 chr2 232049479 232049652 -21206931 + MIR SINE MIR 15 192 -70 204 240 0 0 chr2 232049686 232049736 -21206847 + (TTA)n Simple_repeat Simple_repeat 3 52 0 210 158 0 0 chr2 232050107 232050145 -21206438 + A-rich Low_complexity Low_complexity 1 38 0 767 233 9 66 chr2 232053275 232053503 -21203080 + MER20 DNA MER1_type 4 218 -1 2046 147 10 0 chr2 232053577 232053877 -21202706 + AluJb SINE Alu 1 303 -9 768 21 0 0 chr2 232055063 232055159 -21201424 - L1PA8 LINE L1 0 6172 6077 409 149 0 0 chr2 232055290 232055357 -21201226 + MIR SINE MIR 196 262 0 2146 130 0 0 chr2 232058752 232059052 -21197531 - AluSg SINE Alu -10 300 1 287 248 20 116 chr2 232059279 232059477 -21197106 + L2 LINE L2 3135 3313 0 23 33 0 0 chr2 232059976 232060006 -21196577 + AT_rich Low_complexity Low_complexity 1 30 0 2079 123 3 0 chr2 232060107 232060392 -21196191 + AluSp SINE Alu 18 303 -10 31 0 0 0 chr2 232060483 232060514 -21196069 + AT_rich Low_complexity Low_complexity 1 31 0 2215 115 7 0 chr2 232061083 232061387 -21195196 - AluSp SINE Alu -7 306 1 2049 137 3 0 chr2 232061552 232061852 -21194731 + AluJb SINE Alu 1 301 -11 1994 157 3 0 chr2 232062183 232062488 -21194095 - AluSx SINE Alu -6 306 1 249 57 0 0 chr2 232062788 232062823 -21193760 + (TC)n Simple_repeat Simple_repeat 2 36 0 682 151 63 121 chr2 232062934 232063140 -21193443 + MER20 DNA MER1_type 1 194 -25 1965 138 6 31 chr2 232063202 232063520 -21193063 + AluSx SINE Alu 3 312 0 536 229 290 6 chr2 232064066 232064249 -21192334 + MIR SINE MIR 28 262 0 25 31 0 0 chr2 232064336 232064368 -21192215 + AT_rich Low_complexity Low_complexity 1 32 0 2205 117 0 29 chr2 232064806 232065122 -21191461 - AluSq SINE Alu -6 307 1 279 0 0 0 chr2 232065311 232065342 -21191241 + (CA)n Simple_repeat Simple_repeat 2 32 0 1266 179 21 49 chr2 232066351 232066680 -21189903 + MER33 DNA MER1_type 5 324 0 1867 312 71 40 chr2 232066838 232067033 -21189550 - L3 LINE CR1 -27 1550 1363 635 200 64 0 chr2 232067033 232067158 -21189425 + FLAM_A SINE Alu 1 133 0 1867 312 71 40 chr2 232067158 232067859 -21188724 - L3 LINE CR1 -214 1363 626 341 301 38 136 chr2 232067859 232068053 -21188530 - L3 LINE CR1 -1091 486 359 2282 102 0 10 chr2 232068053 232068356 -21188227 + AluSx SINE Alu 1 300 -12 341 301 38 136 chr2 232068356 232068610 -21187973 - L3 LINE CR1 -1218 359 82 2327 104 0 0 chr2 232068798 232069097 -21187486 - AluSg SINE Alu -11 299 1 22 0 0 0 chr2 232070893 232070915 -21185668 + AT_rich Low_complexity Low_complexity 1 22 0 4685 146 20 14 chr2 232071627 232072121 -21184462 + L1MA7 LINE L1 5508 6010 -281 2276 115 0 0 chr2 232072121 232072425 -21184158 + AluSx SINE Alu 1 304 -8 4685 146 20 14 chr2 232072425 232072709 -21183874 + L1MA7 LINE L1 6010 6291 0 23 54 0 0 chr2 232072777 232072814 -21183769 + AT_rich Low_complexity Low_complexity 1 37 0 438 254 25 8 chr2 232072907 232073025 -21183558 - MIR SINE MIR -26 236 117 225 0 0 0 chr2 232074779 232074804 -21181779 + (TG)n Simple_repeat Simple_repeat 1 25 0 1548 83 14 37 chr2 232077267 232077484 -21179099 + AluSq SINE Alu 3 214 -99 300 54 0 0 chr2 232077485 232077522 -21179061 + AluSq SINE Alu 147 183 -120 1182 109 0 0 chr2 232077522 232077678 -21178905 + AluSq SINE Alu 147 302 -11 1780 167 0 20 chr2 232078788 232079088 -21177495 + AluJb SINE Alu 11 304 -8 1819 89 0 0 chr2 232079683 232079918 -21176665 - AluSc SINE Alu -10 299 65 1900 135 7 0 chr2 232080076 232080358 -21176225 + L1PB1 LINE L1 5860 6143 -8 22 0 0 0 chr2 232081003 232081025 -21175558 + AT_rich Low_complexity Low_complexity 1 22 0 1848 168 0 10 chr2 232081035 232081344 -21175239 + AluJb SINE Alu 1 306 -6 379 323 92 15 chr2 232081370 232081565 -21175018 - MIR SINE MIR -35 227 18 598 174 14 0 chr2 232086277 232086415 -21170168 + (TG)n Simple_repeat Simple_repeat 1 140 0 908 151 6 0 chr2 232086628 232086807 -21169776 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 1308 79 0 0 chr2 232090534 232090618 -21165965 + (TTCTCC)n Simple_repeat Simple_repeat 1 262 0 1308 79 0 0 chr2 232090618 232090796 -21165787 + (TTCTCC)n Simple_repeat Simple_repeat 3 180 0 216 0 0 0 chr2 232092667 232092691 -21163892 + (T)n Simple_repeat Simple_repeat 1 24 0 21 0 0 0 chr2 232095686 232095707 -21160876 + AT_rich Low_complexity Low_complexity 1 21 0 190 70 0 70 chr2 232096114 232096157 -21160426 + (TTTTTG)n Simple_repeat Simple_repeat 1 40 0 2446 46 0 0 chr2 232096305 232096618 -21159965 - AluY SINE Alu 0 313 1 415 276 26 17 chr2 232096770 232096886 -21159697 + MIR SINE MIR 69 185 -77 21 0 0 0 chr2 232097989 232098010 -21158573 + AT_rich Low_complexity Low_complexity 1 21 0 824 121 21 71 chr2 232098010 232098150 -21158433 - FLAM_C SINE Alu 0 133 1 234 136 0 0 chr2 232099256 232099300 -21157283 + (CA)n Simple_repeat Simple_repeat 1 44 0 253 312 28 21 chr2 232099445 232099586 -21156997 - L1MC/D LINE L1 -1944 5864 5723 196 343 94 22 chr2 232099996 232100177 -21156406 + MIR SINE MIR 69 262 0 2090 159 65 65 chr2 232100401 232100590 -21155993 + Charlie1b DNA MER1_type 3 191 -2570 1395 159 104 64 chr2 232100590 232100916 -21155667 - MER44D DNA MER2_type 0 609 1 2090 159 65 65 chr2 232100916 232100978 -21155605 + Charlie1b DNA MER1_type 191 252 -2509 1923 122 30 49 chr2 232100978 232101282 -21155301 + AluSg SINE Alu 1 298 -12 2090 159 65 65 chr2 232101282 232101550 -21155033 + Charlie1b DNA MER1_type 251 523 0 330 275 6 30 chr2 232103536 232103703 -21152880 + T-rich Low_complexity Low_complexity 1 163 0 319 342 24 24 chr2 232107907 232108202 -21148381 - L1M4 LINE L1 -1769 4377 4083 602 304 80 5 chr2 232108497 232108721 -21147862 + MIR SINE MIR 11 251 -11 324 0 0 0 chr2 232108781 232108817 -21147766 + (TC)n Simple_repeat Simple_repeat 1 36 0 24 67 0 0 chr2 232108842 232108887 -21147696 + AT_rich Low_complexity Low_complexity 1 45 0 266 229 0 0 chr2 232108968 232109029 -21147554 + L1ME3A LINE L1 6108 6168 -2 1850 102 35 46 chr2 232109232 232109540 -21147043 - AluSx SINE Alu 0 305 1 239 167 21 0 chr2 232109782 232109830 -21146753 + GA-rich Low_complexity Low_complexity 2 50 0 299 319 159 0 chr2 232109956 232110113 -21146470 + L3 LINE CR1 1295 1476 -101 1421 163 8 17 chr2 232110620 232110860 -21145723 - MSTB LTR MaLR 0 426 189 1228 82 0 41 chr2 232110860 232111031 -21145552 - AluSc SINE Alu -17 292 129 1455 96 5 0 chr2 232111031 232111229 -21145354 - MSTB LTR MaLR -227 199 1 507 271 108 12 chr2 232111319 232111485 -21145098 - MIR SINE MIR -48 214 33 361 260 10 42 chr2 232112613 232112709 -21143874 - MIR3 SINE MIR -3 205 113 23 0 0 0 chr2 232112709 232112732 -21143851 + AT_rich Low_complexity Low_complexity 1 23 0 200 222 0 0 chr2 232112754 232112799 -21143784 + A-rich Low_complexity Low_complexity 1 45 0 2478 80 0 0 chr2 232113737 232114048 -21142535 - AluY SINE Alu 0 311 1 1481 206 30 73 chr2 232114140 232114539 -21142044 - MLT1B LTR MaLR -2 388 7 2090 116 20 7 chr2 232114600 232114902 -21141681 + AluSx SINE Alu 7 312 0 2236 183 17 3 chr2 232115009 232115365 -21141218 + MLT1A1 LTR MaLR 5 365 0 243 250 21 42 chr2 232115403 232115499 -21141084 + MIR SINE MIR 74 167 -95 276 262 57 25 chr2 232115719 232115841 -21140742 - L1ME4a LINE L1 -49 6072 5947 573 257 36 10 chr2 232115872 232116086 -21140497 - L1ME4a LINE L1 -256 5865 5651 247 186 17 0 chr2 232117260 232117319 -21139264 - L1ME4a LINE L1 -2 6119 6060 1689 181 0 48 chr2 232117966 232118281 -21138302 + AluJo SINE Alu 3 302 -10 2102 142 0 7 chr2 232118994 232119304 -21137279 + AluSx SINE Alu 1 308 -4 545 297 55 6 chr2 232119872 232120054 -21136529 + MIR SINE MIR 64 254 -8 515 390 0 0 chr2 232120080 232120226 -21136357 - MER91A DNA MER1_type -50 146 1 1501 232 0 9 chr2 232121395 232121710 -21134873 - AluJo SINE Alu 0 312 1 293 284 76 24 chr2 232121721 232121932 -21134651 - MARNA DNA Mariner -203 383 162 270 260 20 90 chr2 232122000 232122100 -21134483 + L2 LINE L2 3187 3279 -34 748 273 29 24 chr2 232122264 232122473 -21134110 - MIR SINE MIR -39 223 14 254 145 161 32 chr2 232122649 232122711 -21133872 - MLT1B LTR MaLR -279 111 42 297 356 56 12 chr2 232122893 232123053 -21133530 + MIR3 SINE MIR 19 185 -23 293 366 86 23 chr2 232123856 232124031 -21132552 - MER5A DNA MER1_type -1 188 3 225 0 0 0 chr2 232125462 232125487 -21131096 + (T)n Simple_repeat Simple_repeat 1 25 0 2197 126 0 0 chr2 232126789 232127091 -21129492 + AluSx SINE Alu 1 302 -10 190 0 67 0 chr2 232130209 232130239 -21126344 + (TTG)n Simple_repeat Simple_repeat 2 33 0 220 309 91 0 chr2 232130534 232130644 -21125939 + MIR SINE MIR 105 224 -38 829 195 0 6 chr2 232131541 232131705 -21124878 + THE1-int LTR MaLR 1084 1246 -334 709 278 87 10 chr2 232131707 232132262 -21124321 + L1M1 LINE L1 2895 3494 -4071 332 137 73 8 chr2 232132267 232132391 -21124192 + (TA)n Simple_repeat Simple_repeat 1 132 0 214 129 32 0 chr2 232132410 232132472 -21124111 + (TTTA)n Simple_repeat Simple_repeat 2 65 0 51 0 0 0 chr2 232132472 232132523 -21124060 + AT_rich Low_complexity Low_complexity 1 51 0 344 61 31 51 chr2 232132523 232132621 -21123962 + (TTAA)n Simple_repeat Simple_repeat 3 98 0 38 51 0 0 chr2 232132627 232132686 -21123897 + AT_rich Low_complexity Low_complexity 1 59 0 314 81 20 50 chr2 232132686 232132785 -21123798 + (TTAA)n Simple_repeat Simple_repeat 4 99 0 205 164 27 0 chr2 232132800 232132873 -21123710 + (TA)n Simple_repeat Simple_repeat 1 75 0 80 30 0 0 chr2 232132873 232132974 -21123609 + AT_rich Low_complexity Low_complexity 1 101 0 181 109 30 50 chr2 232132974 232133075 -21123508 + (TATAA)n Simple_repeat Simple_repeat 1 99 0 1517 216 42 22 chr2 232133076 232133563 -21123020 + L1M1 LINE L1 3508 4001 -3564 309 357 94 5 chr2 232136372 232136585 -21119998 + L1MC4a LINE L1 4888 5119 -1027 2080 264 85 13 chr2 232136696 232137555 -21119028 + L1MC4a LINE L1 5258 6178 -1630 240 289 59 35 chr2 232139089 232139249 -21117334 + MIR3 SINE MIR 11 172 -36 360 287 52 103 chr2 232139642 232139816 -21116767 + MIR3 SINE MIR 43 207 -1 244 226 21 11 chr2 232140293 232140386 -21116197 + CT-rich Low_complexity Low_complexity 3 96 0 353 338 25 19 chr2 232140428 232140585 -21115998 + MIR SINE MIR 47 204 -58 391 256 83 0 chr2 232141280 232141401 -21115182 + MIR SINE MIR 62 192 -70 306 50 0 0 chr2 232141505 232141545 -21115038 + (TG)n Simple_repeat Simple_repeat 1 40 0 510 222 111 7 chr2 232141770 232141905 -21114678 - MIR SINE MIR 0 262 114 456 286 63 19 chr2 232142149 232142355 -21114228 + L2 LINE L2 2532 2746 -568 210 37 0 0 chr2 232142400 232142427 -21114156 + (A)n Simple_repeat Simple_repeat 1 27 0 673 154 20 87 chr2 232142487 232142536 -21114047 - MLT2D LTR ERVL -2 412 361 306 106 0 0 chr2 232142536 232142583 -21114000 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 1943 184 87 74 chr2 232142588 232143130 -21113453 + MLT2B3 LTR ERVL 5 553 -1 673 154 20 87 chr2 232143130 232143223 -21113360 - MLT2D LTR ERVL -57 357 274 1114 206 20 23 chr2 232143541 232143842 -21112741 - MLT2D LTR ERVL -114 300 1 280 262 24 24 chr2 232143928 232144012 -21112571 + L2 LINE L2 3191 3274 -39 323 327 103 42 chr2 232144414 232144579 -21112004 - MIR3 SINE MIR -11 197 23 418 29 0 223 chr2 232144842 232144945 -21111638 - MADE1 DNA Mariner 0 80 1 1192 158 0 35 chr2 232144954 232145156 -21111427 - AluJo SINE Alu -32 280 86 2083 115 45 0 chr2 232145387 232145674 -21110909 - AluSx SINE Alu -12 300 1 2296 107 7 0 chr2 232146246 232146555 -21110028 - AluSx SINE Alu -1 311 1 296 93 0 19 chr2 232146765 232146819 -21109764 + (TTTTG)n Simple_repeat Simple_repeat 3 55 0 375 41 0 0 chr2 232149238 232149287 -21107296 + (TG)n Simple_repeat Simple_repeat 2 50 0 438 125 25 0 chr2 232149677 232149757 -21106826 + Alu SINE Alu 230 311 0 2311 105 0 6 chr2 232149844 232150157 -21106426 - AluY SINE Alu 0 311 1 21 0 0 0 chr2 232151431 232151452 -21105131 + AT_rich Low_complexity Low_complexity 1 21 0 230 278 0 0 chr2 232151500 232151554 -21105029 + L3 LINE CR1 1306 1359 -218 379 301 75 0 chr2 232151836 232151914 -21104669 + MIR SINE MIR 63 134 -128 797 266 70 6 chr2 232151914 232152230 -21104353 - MER46C DNA MER2_type -2 336 1 379 301 75 0 chr2 232152230 232152297 -21104286 + MIR SINE MIR 134 219 -43 1885 153 0 0 chr2 232154051 232154338 -21102245 + AluSx SINE Alu 1 287 -25 230 268 31 10 chr2 232154505 232154602 -21101981 + (TCTCTG)n Simple_repeat Simple_repeat 3 101 0 365 302 244 10 chr2 232154727 232154932 -21101651 + MIR SINE MIR 1 253 -9 223 274 161 0 chr2 232155895 232155957 -21100626 - MIR3 SINE MIR -53 155 84 386 191 87 43 chr2 232156708 232156823 -21099760 - MIR SINE MIR -57 205 86 472 316 29 0 chr2 232157274 232157413 -21099170 - MER115 DNA AcHobo -491 202 60 1280 245 137 40 chr2 232157568 232158172 -21098411 + L2 LINE L2 2375 3040 -273 22 0 0 0 chr2 232159116 232159138 -21097445 + AT_rich Low_complexity Low_complexity 1 22 0 1004 210 0 10 chr2 232159421 232159616 -21096967 + AluJb SINE Alu 117 309 -3 468 303 60 40 chr2 232159620 232159716 -21096867 - L1ME4a LINE L1 -83 6038 5945 434 34 79 0 chr2 232159722 232159811 -21096772 + (TA)n Simple_repeat Simple_repeat 2 97 0 2112 124 3 0 chr2 232159811 232160095 -21096488 - AluSq SINE Alu -25 288 1 468 303 60 40 chr2 232160095 232160298 -21096285 - L1ME4a LINE L1 -176 5945 5733 409 198 27 18 chr2 232160596 232160707 -21095876 - LTR56 LTR ERV1 -333 112 1 234 215 21 43 chr2 232160781 232160874 -21095709 + (CATATA)n Simple_repeat Simple_repeat 5 95 0 958 92 13 7 chr2 232161069 232161221 -21095362 + (TTTC)n Simple_repeat Simple_repeat 2 154 0 1651 105 4 74 chr2 232161223 232161481 -21095102 - AluSc SINE Alu -33 276 37 338 291 8 71 chr2 232161631 232161758 -21094825 - L2 LINE L2 -1 3271 3153 378 0 0 0 chr2 232163422 232163464 -21093119 + (TG)n Simple_repeat Simple_repeat 2 43 0 1596 136 199 33 chr2 232163600 232163967 -21092616 - MSTA LTR MaLR 0 428 1 199 310 0 0 chr2 232163995 232164053 -21092530 + L2 LINE L2 3251 3308 -5 345 309 67 38 chr2 232164081 232164291 -21092292 + MIR SINE MIR 47 262 0 4890 134 45 16 chr2 232164300 232165218 -21091365 - L1MA4A LINE L1 -5 6298 5355 202 280 67 13 chr2 232165617 232165692 -21090891 - L2 LINE L2 -18 3254 3176 444 200 200 15 chr2 232165923 232166053 -21090530 + MER5A DNA MER1_type 15 168 -21 888 215 129 0 chr2 232166794 232167073 -21089510 - L1MD3 LINE L1 0 7995 7681 3035 208 32 87 chr2 232167081 232168140 -21088443 - L1MC3 LINE L1 -605 7180 6180 2084 148 90 18 chr2 232168555 232168954 -21087629 + MSTA LTR MaLR 1 428 0 6207 169 46 61 chr2 232168956 232169302 -21087281 + MSTA-int LTR MaLR 3 353 -1227 1249 134 74 14 chr2 232169302 232169519 -21087064 - MER30 DNA MER1_type 0 230 1 6207 169 46 61 chr2 232169519 232169558 -21087025 + MSTA-int LTR MaLR 353 391 -1189 2038 141 0 33 chr2 232169558 232169862 -21086721 - AluSx SINE Alu -18 294 1 6207 169 46 61 chr2 232169862 232170892 -21085691 + MSTA-int LTR MaLR 391 1397 -183 237 253 0 48 chr2 232171132 232171215 -21085368 + MIR SINE MIR 172 250 -12 734 201 113 0 chr2 232171226 232171385 -21085198 + MER45A DNA AcHobo 2 178 0 207 197 45 15 chr2 232171423 232171489 -21085094 + GA-rich Low_complexity Low_complexity 4 71 0 33 0 0 0 chr2 232171518 232171551 -21085032 + AT_rich Low_complexity Low_complexity 1 33 0 625 294 39 91 chr2 232172040 232172186 -21084397 - L3 LINE CR1 -233 1344 1192 1885 149 0 7 chr2 232172186 232172461 -21084122 + AluJo SINE Alu 22 294 -18 625 294 39 91 chr2 232172461 232172699 -21083884 - L3 LINE CR1 -385 1192 980 2198 113 15 73 chr2 232172746 232172792 -21083791 - THE1C LTR MaLR 0 375 328 2549 47 0 7 chr2 232172792 232173091 -21083492 + AluY SINE Alu 1 297 -14 2198 113 15 73 chr2 232173091 232173442 -21083141 - THE1C LTR MaLR -47 328 1 2336 98 0 0 chr2 232175647 232175944 -21080639 - AluSc SINE Alu -12 297 1 601 242 36 27 chr2 232176188 232176411 -21080172 - MER112 DNA MER1_type -6 254 30 444 171 56 25 chr2 232176850 232176982 -21079601 - LTR24B LTR ERV1 0 635 470 476 309 54 12 chr2 232177156 232177324 -21079259 - MIR SINE MIR -39 223 49 304 286 8 63 chr2 232177475 232177601 -21078982 - MIR SINE MIR -74 188 70 333 237 0 13 chr2 232178812 232178888 -21077695 - MIR SINE MIR -71 191 117 22 70 0 0 chr2 232179565 232179608 -21076975 + AT_rich Low_complexity Low_complexity 1 43 0 617 170 0 9 chr2 232180572 232180684 -21075899 + MLT1A1 LTR MaLR 1 111 -254 * 968 120 4 8 chr2 232180673 232180835 -21075748 + MLT1A1 LTR MaLR 225 365 0 4193 155 12 22 chr2 232181172 232182096 -21074487 + L1PB4 LINE L1 4823 5744 -412 2234 164 45 35 chr2 232182096 232182518 -21074065 - MSTB LTR MaLR 0 426 1 4193 155 12 22 chr2 232182518 232182784 -21073799 + L1PB4 LINE L1 5744 6011 -145 377 191 0 0 chr2 232182793 232182877 -21073706 + L1PB4 LINE L1 6073 6156 0 366 312 50 35 chr2 232184260 232184401 -21072182 + MIR3 SINE MIR 32 174 -34 571 191 149 46 chr2 232184440 232184634 -21071949 - MER106A DNA MER1_type -22 214 1 457 288 119 49 chr2 232184664 232184978 -21071605 + L1 LINE L1 4680 5021 -1125 2254 120 0 0 chr2 232184978 232185278 -21071305 + AluSx SINE Alu 1 300 -12 457 288 119 49 chr2 232185278 232185307 -21071276 + L1 LINE L1 5021 5047 -1099 501 320 111 65 chr2 232185326 232185760 -21070823 - L1MEd LINE L1 -5247 872 419 1807 183 31 6 chr2 232186183 232186533 -21070050 + MLT1A1 LTR MaLR 6 364 -1 413 219 17 180 chr2 232186809 232187042 -21069541 + MIR SINE MIR 68 262 0 22 0 0 0 chr2 232187275 232187297 -21069286 + AT_rich Low_complexity Low_complexity 1 22 0 1465 161 65 65 chr2 232187745 232188191 -21068392 - Charlie1b DNA MER1_type -1 522 77 383 306 16 0 chr2 232188187 232188308 -21068275 - Charlie1b DNA MER1_type -394 129 7 * 635 203 158 0 chr2 232188338 232188496 -21068087 - MIR SINE MIR -78 184 2 259 225 25 25 chr2 232188575 232188655 -21067928 + (TCTA)n Simple_repeat Simple_repeat 1 80 0 4592 80 1 14 chr2 232189986 232190634 -21065949 + L1PA8A LINE L1 5465 6104 -27 420 226 38 9 chr2 232191841 232191947 -21064636 - LTR67 LTR ERVL -8 549 441 342 301 34 14 chr2 232192138 232192284 -21064299 - ERVL LTR ERVL -1547 4217 4069 1780 339 53 20 chr2 232192289 232193362 -21063221 + ERVL LTR ERVL 4219 5326 -438 1096 277 118 16 chr2 232193622 232194063 -21062520 + LTR33 LTR ERVL 32 517 -4 458 217 125 0 chr2 232194093 232194213 -21062370 - MIR SINE MIR -30 232 98 687 264 77 109 chr2 232194719 232195026 -21061557 - MLT1K LTR MaLR 0 588 308 2486 76 0 0 chr2 232195026 232195329 -21061254 + AluY SINE Alu 1 303 -8 687 264 77 109 chr2 232195329 232195615 -21060968 - MLT1K LTR MaLR -280 308 14 1437 207 9 12 chr2 232195678 232196016 -21060567 + MER63 DNA MER1_type 675 1011 -51 200 29 0 59 chr2 232196320 232196354 -21060229 + (CAAAAA)n Simple_repeat Simple_repeat 6 37 0 234 296 61 31 chr2 232196495 232196593 -21059990 - L2 LINE L2 -19 3253 3153 226 425 0 0 chr2 232196807 232196901 -21059682 - MIR SINE MIR -167 95 2 5666 168 20 10 chr2 232197010 232198806 -21057777 + L1PB3 LINE L1 4006 5834 -320 2065 119 0 3 chr2 232198806 232199134 -21057449 + AluSq SINE Alu 1 327 0 5666 168 20 10 chr2 232199134 232199459 -21057124 + L1PB3 LINE L1 5834 6154 0 24 0 0 0 chr2 232200865 232200889 -21055694 + AT_rich Low_complexity Low_complexity 1 24 0 736 326 114 23 chr2 232201019 232201457 -21055126 + L2 LINE L2 2836 3313 0 195 114 0 0 chr2 232202559 232202594 -21053989 + (GTTTG)n Simple_repeat Simple_repeat 1 35 0 1530 189 11 7 chr2 232202594 232202874 -21053709 - AluJb SINE Alu -31 281 1 1986 151 36 41 chr2 232203349 232203612 -21052971 + L1MC1 LINE L1 5939 6201 -132 2407 54 3 38 chr2 232203612 232203925 -21052658 - AluY SINE Alu -9 302 1 1986 151 36 41 chr2 232203925 232204051 -21052532 + L1MC1 LINE L1 6201 6326 -7 337 290 16 16 chr2 232204169 232204293 -21052290 - L1ME4a LINE L1 -277 5844 5721 258 273 83 41 chr2 232204550 232204671 -21051912 - MIR SINE MIR -13 249 124 26 64 0 0 chr2 232204786 232204833 -21051750 + AT_rich Low_complexity Low_complexity 1 47 0 2567 36 0 3 chr2 232204833 232205141 -21051442 - L1PA3 LINE L1 -3 6152 5846 365 200 91 73 chr2 232205441 232205606 -21050977 + MLT1H LTR MaLR 382 549 0 271 277 58 7 chr2 232205607 232205744 -21050839 - L1MC5 LINE L1 -62 7899 7756 * 433 226 16 8 chr2 232205736 232205860 -21050723 - L1MC5 LINE L1 -534 7427 7303 533 254 80 18 chr2 232206054 232206278 -21050305 - L1MC5 LINE L1 -756 7205 6968 231 61 0 0 chr2 232206704 232206737 -21049846 + (CA)n Simple_repeat Simple_repeat 2 34 0 306 290 61 15 chr2 232207374 232207505 -21049078 - L1ME4a LINE L1 -18 6103 5967 2238 174 39 7 chr2 232207535 232207950 -21048633 - MSTA LTR MaLR 0 428 1 4496 188 18 25 chr2 232208033 232208349 -21048234 + L1MA9 LINE L1 5121 5438 -874 2380 99 0 0 chr2 232208349 232208653 -21047930 + AluSq SINE Alu 1 304 -9 4496 188 18 25 chr2 232208653 232209495 -21047088 + L1MA9 LINE L1 5438 6273 -39 22 0 0 0 chr2 232209496 232209518 -21047065 + AT_rich Low_complexity Low_complexity 1 22 0 524 279 19 19 chr2 232209661 232209819 -21046764 - MER63A DNA MER1_type -1 209 52 251 256 98 23 chr2 232209936 232210069 -21046514 - Charlie8 DNA MER1_type -2183 234 92 394 311 25 121 chr2 232210630 232210945 -21045638 - L2 LINE L2 -1 3271 2987 331 213 13 0 chr2 232211942 232212017 -21044566 + MER94 DNA DNA 24 99 -35 1078 243 105 39 chr2 232212176 232212613 -21043970 + MLT1C LTR MaLR 2 467 0 1181 194 28 12 chr2 232212919 232213171 -21043412 - MLT1F1 LTR MaLR 0 567 312 837 169 0 15 chr2 232213284 232213420 -21043163 - AluJo SINE Alu -178 134 1 380 193 170 7 chr2 232213431 232213566 -21043017 - MLT1F1 LTR MaLR -385 157 1 996 169 107 37 chr2 232213970 232214212 -21042371 + MSTA LTR MaLR 170 428 0 2170 114 3 16 chr2 232214551 232214858 -21041725 + AluSc SINE Alu 5 307 -2 1380 211 39 14 chr2 232215333 232215450 -21041133 + AluJo SINE Alu 1 114 -188 189 0 0 0 chr2 232215450 232215471 -21041112 + (CA)n Simple_repeat Simple_repeat 2 22 0 1380 211 39 14 chr2 232215471 232215638 -21040945 + AluJo SINE Alu 114 292 -10 229 289 0 0 chr2 232215764 232215816 -21040767 - MIR SINE MIR 0 262 211 203 312 147 13 chr2 232216154 232216311 -21040272 - MIR SINE MIR -37 225 48 255 313 192 0 chr2 232217467 232217566 -21039017 - MER5A DNA MER1_type -3 186 69 192 163 0 0 chr2 232217567 232217610 -21038973 + T-rich Low_complexity Low_complexity 1 43 0 541 274 91 11 chr2 232217752 232217927 -21038656 + MER5A DNA MER1_type 1 189 0 261 0 0 0 chr2 232219373 232219402 -21037181 + (TG)n Simple_repeat Simple_repeat 1 29 0 1733 220 137 11 chr2 232219759 232220441 -21036142 - L1ME1 LINE L1 -29 6137 5293 278 174 31 55 chr2 232221565 232221646 -21034937 + L1MC3 LINE L1 7551 7632 -153 2161 133 3 7 chr2 232221646 232221947 -21034636 - AluSx SINE Alu -12 300 1 278 174 31 55 chr2 232221947 232222023 -21034560 + L1MC3 LINE L1 7632 7764 -21 300 196 0 0 chr2 232222981 232223037 -21033546 - L2 LINE L2 -2 3311 3256 444 82 0 0 chr2 232223075 232223136 -21033447 + (TGAA)n Simple_repeat Simple_repeat 3 63 0 2350 77 0 13 chr2 232223237 232223537 -21033046 + AluY SINE Alu 1 296 -15 287 252 72 7 chr2 232223972 232224111 -21032472 - L1MC5 LINE L1 -78 7883 7736 9643 126 11 78 chr2 232224292 232224575 -21032008 - Tigger1 DNA MER2_type -510 1908 1607 1734 197 3 0 chr2 232224575 232224885 -21031698 + AluJb SINE Alu 2 312 0 9643 126 11 78 chr2 232224885 232226419 -21030164 - Tigger1 DNA MER2_type -811 1607 220 2065 124 39 39 chr2 232226419 232226782 -21029801 + THE1B LTR MaLR 2 364 0 9643 126 11 78 chr2 232226782 232226845 -21029738 - Tigger1 DNA MER2_type -2198 220 154 303 303 77 24 chr2 232226917 232227125 -21029458 + L1P5 LINE L1 5365 5583 -571 216 200 0 0 chr2 232227168 232227218 -21029365 + (CATATA)n Simple_repeat Simple_repeat 2 51 0 490 254 75 23 chr2 232227439 232227612 -21028971 + LTR33 LTR ERVL 9 190 -331 305 294 0 22 chr2 232227777 232227869 -21028714 + LTR33 LTR ERVL 432 521 0 402 21 0 0 chr2 232228520 232228567 -21028016 + (CA)n Simple_repeat Simple_repeat 2 48 0 261 304 11 22 chr2 232229398 232229490 -21027093 - MIR3 SINE MIR -9 199 109 813 241 10 5 chr2 232230506 232230705 -21025878 - MER2 DNA MER2_type -1 344 145 437 85 0 0 chr2 232230805 232230864 -21025719 + THE1B LTR MaLR 306 364 0 * 943 181 67 5 chr2 232230864 232231065 -21025518 - Tigger1 DNA MER2_type -2203 215 2 451 330 34 6 chr2 232231163 232231342 -21025241 + MIR SINE MIR 79 262 0 185 400 63 0 chr2 232232510 232232605 -21023978 + L2 LINE L2 3155 3255 -17 1944 149 36 130 chr2 232233068 232233538 -21023045 - MSTB LTR MaLR 0 426 1 229 186 81 23 chr2 232234022 232234108 -21022475 - L1MC5 LINE L1 -35 7926 7836 208 91 61 0 chr2 232234972 232235005 -21021578 + (TATG)n Simple_repeat Simple_repeat 2 36 0 255 224 158 0 chr2 232235973 232236049 -21020534 + L2 LINE L2 2934 3021 -251 25 75 0 0 chr2 232236357 232236410 -21020173 + AT_rich Low_complexity Low_complexity 1 53 0 2204 130 0 0 chr2 232236684 232236991 -21019592 + AluSx SINE Alu 2 308 -4 399 261 11 0 chr2 232237002 232237090 -21019493 + MER5A DNA MER1_type 4 92 -97 209 308 56 84 chr2 232237493 232237636 -21018947 + L2 LINE L2 3134 3272 0 1827 150 0 14 chr2 232238250 232238530 -21018053 - AluSx SINE Alu -36 276 1 2228 105 7 7 chr2 232238542 232238846 -21017737 - AluSc SINE Alu -5 304 1 238 286 38 38 chr2 232238850 232238955 -21017628 + MIR SINE MIR 125 229 -33 1848 158 3 26 chr2 232238987 232239297 -21017286 - AluJo SINE Alu -7 305 3 323 351 73 66 chr2 232239596 232240037 -21016546 - L2 LINE L2 -22 3250 2807 2428 149 41 12 chr2 232240066 232240482 -21016101 + MSTA LTR MaLR 1 428 0 2696 108 0 11 chr2 232240534 232240912 -21015671 - THE1C LTR MaLR -1 374 1 702 162 0 0 chr2 232241458 232241569 -21015014 + FLAM_C SINE Alu 1 111 -32 201 143 0 0 chr2 232241599 232241634 -21014949 + (CATA)n Simple_repeat Simple_repeat 2 36 0 261 0 0 0 chr2 232243111 232243140 -21013443 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 404 386 16 4 chr2 232243231 232243477 -21013106 - L2 LINE L2 -869 2445 2197 328 281 177 16 chr2 232243540 232243919 -21012664 - MLT1L LTR MaLR 0 615 73 201 147 0 0 chr2 232244190 232244224 -21012359 + (A)n Simple_repeat Simple_repeat 1 34 0 210 320 0 0 chr2 232245427 232245505 -21011078 + GA-rich Low_complexity Low_complexity 2 79 0 1658 175 76 54 chr2 232245609 232246032 -21010551 - MSTB1 LTR MaLR 0 432 1 743 202 55 63 chr2 232246062 232246300 -21010283 - L1MA9 LINE L1 -193 6119 5884 312 138 0 0 chr2 232246299 232246357 -21010226 + L1MA8 LINE L1 6110 6167 -124 * 369 122 146 0 chr2 232246439 232246521 -21010062 + L1MA5A LINE L1 6200 6293 -4 1620 189 7 26 chr2 232246703 232247005 -21009578 + AluJb SINE Alu 1 296 -16 21 0 0 0 chr2 232297658 232297679 -20958904 + AT_rich Low_complexity Low_complexity 1 21 0 208 231 16 87 chr2 232301304 232301400 -20955183 - MIR SINE MIR -108 100 31 21 36 0 0 chr2 232304056 232304084 -20952499 + AT_rich Low_complexity Low_complexity 1 28 0 456 241 84 42 chr2 232304411 232304577 -20952006 - MIR SINE MIR -26 236 64 2160 113 3 0 chr2 232304916 232305251 -20951332 + AluSx SINE Alu 1 336 0 243 254 0 30 chr2 232305253 232305320 -20951263 - MLT1K LTR MaLR -88 500 436 252 288 38 12 chr2 232305737 232305817 -20950766 - MIR SINE MIR -64 144 63 463 170 50 0 chr2 232306052 232306152 -20950431 + L1MB7 LINE L1 5457 5561 -623 2123 147 81 5 chr2 232306158 232306566 -20950017 + L1MB7 LINE L1 5686 6124 -60 398 143 38 19 chr2 232306568 232306673 -20949910 + (TAGA)n Simple_repeat Simple_repeat 4 110 0 394 345 18 0 chr2 232306677 232306787 -20949796 - L2 LINE L2 -5 3308 3197 388 317 85 15 chr2 232308569 232308768 -20947815 + MIR SINE MIR 2 214 -48 1127 78 0 0 chr2 232308773 232308927 -20947656 + L1PA8 LINE L1 6019 6172 0 230 204 23 0 chr2 232309454 232309498 -20947085 + L2 LINE L2 3251 3295 -18 1166 217 64 47 chr2 232309646 232310005 -20946578 - MLT1A2 LTR MaLR -6 368 4 2104 132 6 16 chr2 232311093 232311404 -20945179 - AluSq SINE Alu -4 309 2 406 294 51 38 chr2 232311697 232311861 -20944722 + MIR SINE MIR 20 191 -63 2273 103 0 0 chr2 232312205 232312505 -20944078 + AluSx SINE Alu 1 300 -12 218 308 51 26 chr2 232312903 232312981 -20943602 - L2 LINE L2 -65 3248 3169 2317 61 3 55 chr2 232313264 232313591 -20942992 + AluY SINE Alu 1 310 -1 1833 176 0 19 chr2 232314170 232314482 -20942101 - AluJo SINE Alu -6 306 1 360 0 0 0 chr2 232315342 232315382 -20941201 + (TG)n Simple_repeat Simple_repeat 1 40 0 2354 98 0 0 chr2 232316241 232316547 -20940036 - AluSg1 SINE Alu -1 308 3 2245 91 7 16 chr2 232316549 232316858 -20939725 - AluSx SINE Alu -6 306 1 1022 127 13 0 chr2 232317483 232317744 -20938839 + AluSg/x SINE Alu 158 420 0 2128 162 53 2 chr2 232317770 232317957 -20938626 + MLT2D LTR ERVL 1 177 -237 336 83 0 0 chr2 232317957 232318005 -20938578 + (TAA)n Simple_repeat Simple_repeat 1 48 0 2128 162 53 2 chr2 232318005 232318176 -20938407 + MLT2D LTR ERVL 177 338 -76 324 0 0 0 chr2 232318176 232318212 -20938371 + (CA)n Simple_repeat Simple_repeat 2 37 0 207 0 0 0 chr2 232318211 232318234 -20938349 + (TC)n Simple_repeat Simple_repeat 1 23 0 * 2128 162 53 2 chr2 232318212 232318268 -20938315 + MLT2D LTR ERVL 338 414 0 256 257 18 9 chr2 232319184 232319293 -20937290 - Charlie7 DNA MER1_type -48 2564 2455 206 350 43 0 chr2 232320514 232320631 -20935952 - MIR SINE MIR -110 152 31 566 271 98 24 chr2 232321654 232321949 -20934634 - L1MC4a LINE L1 -1875 5933 5617 280 336 22 59 chr2 232322622 232322783 -20933800 - MIR SINE MIR -37 171 15 3791 118 8 0 chr2 232322836 232323359 -20933224 - MER1A DNA MER1_type 0 527 1 571 344 83 0 chr2 232326943 232327184 -20929399 - MIR SINE MIR 0 262 2 951 69 0 0 chr2 232327971 232328102 -20928481 + MLT2A2 LTR ERVL 1 131 -322 371 91 18 0 chr2 232328102 232328157 -20928426 - MLT2A1 LTR ERVL -247 197 142 308 121 52 0 chr2 232328173 232328231 -20928352 + MLT2B3 LTR ERVL 126 186 -258 1121 248 56 73 chr2 232328251 232328662 -20927921 + MLT2B3 LTR ERVL 151 554 0 2534 116 6 3 chr2 232328728 232329091 -20927492 - THE1B LTR MaLR 0 364 1 301 401 38 0 chr2 232329290 232329447 -20927136 - MIR SINE MIR -76 186 24 2013 126 67 14 chr2 232329676 232330032 -20926551 + THE1C LTR MaLR 1 375 0 1715 251 30 26 chr2 232330133 232330746 -20925837 + HsTC2a DNA Tc2 2 629 -115 2338 73 0 0 chr2 232332649 232332937 -20923646 + AluSp SINE Alu 1 288 -25 405 0 0 0 chr2 232332939 232332984 -20923599 + (TG)n Simple_repeat Simple_repeat 2 46 0 398 246 164 15 chr2 232334215 232334349 -20922234 + MIR SINE MIR 57 210 -52 2286 102 0 3 chr2 232334463 232334758 -20921825 - AluSx SINE Alu -18 294 1 2187 115 0 34 chr2 232335800 232336121 -20920462 - AluSq SINE Alu -3 310 1 181 162 81 0 chr2 232336161 232336198 -20920385 - L2 LINE L2 -3 3310 3271 1180 186 31 49 chr2 232336272 232336599 -20919984 - MER33 DNA MER1_type -15 309 1 441 309 100 107 chr2 232336599 232336848 -20919735 - L2 LINE L2 -12 3301 3052 2019 153 129 8 chr2 232336848 232337227 -20919356 - MSTA LTR MaLR 0 428 4 441 309 100 107 chr2 232337227 232337304 -20919279 - L2 LINE L2 -261 3052 2976 2338 185 34 18 chr2 232337304 232337801 -20918782 - MLT1D LTR MaLR 0 505 1 441 309 100 107 chr2 232337801 232338046 -20918537 - L2 LINE L2 -337 2976 2733 247 351 54 42 chr2 232338102 232338270 -20918313 - L2 LINE L2 -576 2738 2569 23 68 0 0 chr2 232341142 232341186 -20915397 + AT_rich Low_complexity Low_complexity 1 44 0 340 82 246 0 chr2 232341257 232341318 -20915265 - THE1A LTR MaLR -279 76 1 465 408 5 46 chr2 232341482 232341850 -20914733 - L2 LINE L2 -4 3268 2916 651 285 77 11 chr2 232342000 232342232 -20914351 - MIR SINE MIR 0 262 7 437 288 88 25 chr2 232342608 232342768 -20913815 + MIR3 SINE MIR 17 186 -22 185 324 0 14 chr2 232343267 232343341 -20913242 + MIR3 SINE MIR 129 201 -7 2287 115 0 10 chr2 232343737 232344049 -20912534 - AluSc SINE Alu 0 309 1 2454 127 69 7 chr2 232344513 232344779 -20911804 - MER65A LTR ERV1 0 445 142 369 0 0 0 chr2 232344779 232344820 -20911763 + (TG)n Simple_repeat Simple_repeat 2 42 0 2454 127 69 7 chr2 232344820 232344972 -20911611 - MER65A LTR ERV1 -303 142 1 278 256 0 33 chr2 232345525 232345615 -20910968 - L1ME LINE L1 -399 5722 5636 245 195 62 44 chr2 232345655 232345768 -20910815 - L1ME LINE L1 -2380 5428 5314 467 313 110 12 chr2 232347478 232347641 -20908942 + MER5A DNA MER1_type 9 187 -2 234 294 156 55 chr2 232347644 232347862 -20908721 + L2 LINE L2 3074 3313 0 2272 113 0 22 chr2 232347960 232348279 -20908304 + AluSx SINE Alu 1 312 0 219 314 47 0 chr2 232348402 232348488 -20908095 + L2 LINE L2 3163 3252 -61 2055 123 11 62 chr2 232351015 232351389 -20905194 + THE1A LTR MaLR 1 355 0 2167 264 149 55 chr2 232352340 232353362 -20903221 + L2 LINE L2 1785 2967 -346 2234 98 0 0 chr2 232353362 232353658 -20902925 + AluY SINE Alu 1 296 -15 2167 264 149 55 chr2 232353658 232353922 -20902661 + L2 LINE L2 2967 3205 -108 281 224 168 0 chr2 232354085 232354210 -20902373 - MER102a DNA MER1_type -9 321 176 544 258 47 19 chr2 232355416 232355611 -20900972 + LTR16C LTR ERVL 158 396 -95 1544 176 25 94 chr2 232355611 232356003 -20900580 + MLT1A1 LTR MaLR 1 365 0 544 258 47 19 chr2 232356003 232356102 -20900481 + LTR16C LTR ERVL 396 491 0 1123 283 82 29 chr2 232356565 232357050 -20899533 - MLT1J LTR MaLR 0 511 1 351 273 26 130 chr2 232359076 232359230 -20897353 - MER5A DNA MER1_type 0 189 41 182 176 14 40 chr2 232359568 232359642 -20896941 + (TA)n Simple_repeat Simple_repeat 2 73 0 804 216 20 20 chr2 232359774 232359973 -20896610 - MER20 DNA MER1_type -19 200 2 277 262 134 76 chr2 232360106 232360278 -20896305 - MIR SINE MIR -25 183 2 2254 117 0 0 chr2 232360777 232361068 -20895515 - AluSx SINE Alu -13 299 9 40827 33 22 1 chr2 232361275 232367299 -20889284 + L1PA2 LINE L1 1 6151 -4 29 28 0 0 chr2 232367325 232367361 -20889222 + AT_rich Low_complexity Low_complexity 1 36 0 286 380 62 0 chr2 232367410 232367523 -20889060 - L2 LINE L2 -16 3256 3137 395 194 62 16 chr2 232367644 232367773 -20888810 + L1ME4a LINE L1 5966 6100 -21 224 347 40 24 chr2 232367829 232367953 -20888630 - L2 LINE L2 -1477 1837 1712 857 320 97 2 chr2 232370384 232370824 -20885759 - L2 LINE L2 -279 3034 2554 3699 195 14 57 chr2 232371162 232371433 -20885150 - L1MB8 LINE L1 0 6178 5897 2057 149 0 0 chr2 232371433 232371729 -20884854 + AluSx SINE Alu 1 296 -16 3699 195 14 57 chr2 232371729 232372578 -20884005 - L1MB8 LINE L1 -281 5897 5107 29 0 0 0 chr2 232373204 232373233 -20883350 + AT_rich Low_complexity Low_complexity 1 29 0 1870 144 0 33 chr2 232373277 232373583 -20883000 - AluSx SINE Alu -16 296 1 1370 306 82 48 chr2 232374276 232374898 -20881685 + MER115 DNA AcHobo 51 693 0 510 220 61 15 chr2 232374921 232375053 -20881530 - L2 LINE L2 0 3313 3176 336 365 118 24 chr2 232375083 232375499 -20881084 - L2 LINE L2 0 3272 2818 272 321 73 36 chr2 232375933 232376098 -20880485 - MIR SINE MIR -26 236 66 548 286 148 9 chr2 232376171 232376381 -20880202 + MIR SINE MIR 18 256 -6 570 275 88 25 chr2 232377439 232377679 -20878904 + MER112 DNA MER1_type 1 255 -1 218 278 14 14 chr2 232378109 232378181 -20878402 + GA-rich Low_complexity Low_complexity 2 73 0 9185 38 6 0 chr2 232378304 232380126 -20876457 + L1PA4 LINE L1 4329 6155 0 4919 144 27 49 chr2 232380296 232380328 -20876255 - L1MC1 LINE L1 0 6333 6302 1835 77 4 0 chr2 232380328 232380562 -20876021 - AluY SINE Alu -1 310 76 4919 144 27 49 chr2 232380562 232381405 -20875178 - L1MC1 LINE L1 -31 6302 5477 410 45 0 45 chr2 232381426 232381492 -20875091 + (TAGA)n Simple_repeat Simple_repeat 3 65 0 421 176 22 0 chr2 232381493 232381584 -20874999 + (TA)n Simple_repeat Simple_repeat 2 94 0 2979 99 5 5 chr2 232381584 232381988 -20874595 - MLT2A1 LTR ERVL -40 404 1 1473 163 0 5 chr2 232381988 232382299 -20874284 - L1MC1 LINE L1 -743 5403 5184 1877 165 0 9 chr2 232384034 232384349 -20872234 + AluJb SINE Alu 1 312 0 459 153 0 146 chr2 232384441 232384578 -20872005 - MIR SINE MIR -1 261 145 250 288 65 43 chr2 232385063 232385202 -20871381 - MIR SINE MIR -44 218 77 320 289 11 11 chr2 232385208 232385298 -20871285 - MER81 DNA DNA 0 114 25 380 143 14 0 chr2 232385443 232385513 -20871070 + GA-rich Low_complexity Low_complexity 4 74 0 21 0 0 0 chr2 232386311 232386332 -20870251 + AT_rich Low_complexity Low_complexity 1 21 0 617 338 211 5 chr2 232387739 232388180 -20868403 + L3 LINE CR1 1020 1551 -26 280 247 68 0 chr2 232388842 232388915 -20867668 - L1M3 LINE L1 -467 5704 5627 1630 222 43 31 chr2 232388921 232389335 -20867248 + L1 LINE L1 4615 5033 -1113 267 351 27 0 chr2 232389368 232389479 -20867104 + MER5B DNA MER1_type 63 176 -2 710 325 111 31 chr2 232389500 232389952 -20866631 + MLT1K LTR MaLR 91 578 -10 225 316 176 41 chr2 232390021 232390607 -20865976 + L2 LINE L2 1609 2273 -1041 431 319 135 69 chr2 232390609 232390897 -20865686 + L2 LINE L2 2965 3271 -1 23 54 0 0 chr2 232391087 232391124 -20865459 + AT_rich Low_complexity Low_complexity 1 37 0 1286 138 51 0 chr2 232391172 232391368 -20865215 - AluJb SINE Alu -23 289 84 2045 291 100 39 chr2 232392150 232392242 -20864341 + L2 LINE L2 2138 2223 -1090 2380 102 0 3 chr2 232392242 232392555 -20864028 - AluSq SINE Alu -1 312 1 2045 291 100 39 chr2 232392555 232393583 -20863000 + L2 LINE L2 2223 3312 -1 183 139 0 0 chr2 232393672 232393708 -20862875 + (TTA)n Simple_repeat Simple_repeat 2 37 0 458 279 22 22 chr2 232394777 232394913 -20861670 + MIR SINE MIR 127 262 0 197 204 0 41 chr2 232394994 232395043 -20861540 - L2 LINE L2 -102 3211 3165 3700 292 90 21 chr2 232395166 232397542 -20859041 + HERV16 LTR ERVL 755 3388 -1905 343 285 144 57 chr2 232397575 232397868 -20858715 + HERV16 LTR ERVL 3136 3402 -1594 2084 145 0 7 chr2 232397868 232398165 -20858418 + AluSx SINE Alu 1 295 -17 343 285 144 57 chr2 232398165 232398384 -20858199 + HERV16 LTR ERVL 3402 3693 -1303 447 170 104 0 chr2 232398401 232398507 -20858076 + MER63 DNA MER1_type 876 992 -70 4563 178 16 14 chr2 232398525 232399605 -20856978 + L1PA16 LINE L1 4403 5482 -684 2100 118 3 10 chr2 232399605 232399901 -20856682 + AluSq SINE Alu 1 294 -19 4563 178 16 14 chr2 232399901 232400024 -20856559 + L1PA16 LINE L1 5482 5603 -563 953 57 81 0 chr2 232400024 232400148 -20856435 - MER85 DNA T2_type -5 134 1 3680 137 20 11 chr2 232400148 232400710 -20855873 + L1PA16 LINE L1 5600 6166 0 370 210 126 42 chr2 232400792 232400935 -20855648 + L1ME4a LINE L1 5949 6103 -18 427 192 13 13 chr2 232400945 232401023 -20855560 + MER63 DNA MER1_type 980 1057 -3 216 269 0 0 chr2 232402155 232402207 -20854376 - MIR SINE MIR -73 135 84 1843 173 10 0 chr2 232403375 232403676 -20852907 + AluJo SINE Alu 1 304 -8 200 170 19 0 chr2 232403702 232403755 -20852828 + (TTTA)n Simple_repeat Simple_repeat 4 57 0 2254 100 0 7 chr2 232404267 232404579 -20852004 + AluSg SINE Alu 1 310 0 1741 155 3 11 chr2 232404823 232405107 -20851476 + AluJo SINE Alu 1 282 -30 225 83 0 0 chr2 232405115 232405151 -20851432 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 2276 183 86 107 chr2 232405461 232406203 -20850380 + LTR8A LTR ERV1 1 727 0 203 306 59 12 chr2 232406400 232406485 -20850098 + L2 LINE L2 3161 3249 -23 706 201 28 0 chr2 232406612 232406756 -20849827 + MER45A DNA AcHobo 31 178 0 214 287 47 85 chr2 232407245 232407374 -20849209 - MIR SINE MIR -40 222 99 189 154 0 0 chr2 232407449 232407488 -20849095 + (TTTA)n Simple_repeat Simple_repeat 4 42 0 293 252 58 106 chr2 232407488 232407714 -20848869 + L2 LINE L2 2267 2481 -833 216 246 15 31 chr2 232407778 232407843 -20848740 + L2 LINE L2 3249 3312 -1 1897 53 49 4 chr2 232408257 232408500 -20848083 - AluY SINE Alu -11 300 47 4451 63 6 0 chr2 232408845 232409381 -20847202 - L1PA7 LINE L1 -1 6153 5615 180 176 0 0 chr2 232410111 232410145 -20846438 + MIR SINE MIR 217 250 -12 37 52 0 0 chr2 232410684 232410742 -20845841 + AT_rich Low_complexity Low_complexity 1 58 0 2117 117 3 28 chr2 232411192 232411368 -20845215 - AluSx SINE Alu -3 309 143 2509 65 0 3 chr2 232411368 232411676 -20844907 - AluY SINE Alu -4 307 1 2117 117 3 28 chr2 232411676 232411816 -20844767 - AluSx SINE Alu -169 143 1 291 305 48 37 chr2 232412375 232412562 -20844021 - ERVL LTR ERVL -4324 1369 1142 1683 292 174 17 chr2 232413384 232413803 -20842780 + L2 LINE L2 1900 2252 -1062 306 0 0 0 chr2 232413803 232413837 -20842746 + (CA)n Simple_repeat Simple_repeat 1 34 0 1683 292 174 17 chr2 232413837 232414346 -20842237 + L2 LINE L2 2252 2974 -340 331 274 82 67 chr2 232414342 232414550 -20842033 + L2 LINE L2 3080 3290 -23 * 303 311 24 72 chr2 232414921 232415130 -20841453 - MIR SINE MIR -56 206 8 2250 119 0 0 chr2 232415686 232415988 -20840595 + AluSx SINE Alu 1 302 -10 2233 134 0 3 chr2 232415991 232416304 -20840279 + AluSx SINE Alu 1 312 0 238 200 0 53 chr2 232417023 232417098 -20839485 + L1MC4 LINE L1 6622 6692 -1350 361 283 0 73 chr2 232417419 232417610 -20838973 + MER104 DNA Tc2 1 177 -3 1159 148 18 79 chr2 232418058 232418287 -20838296 - MER20 DNA MER1_type -4 215 1 2323 90 0 7 chr2 232418403 232418702 -20837881 + AluSc SINE Alu 1 297 -12 24 0 0 0 chr2 232418774 232418798 -20837785 + AT_rich Low_complexity Low_complexity 1 24 0 425 302 172 19 chr2 232419033 232419248 -20837335 - MIR SINE MIR -1 261 14 328 368 54 11 chr2 232419622 232419807 -20836776 - MIR SINE MIR -50 212 20 186 319 77 11 chr2 232420021 232420112 -20836471 - MIR SINE MIR -63 199 103 182 256 44 11 chr2 232420287 232420377 -20836206 - MIR SINE MIR -66 196 104 503 213 96 84 chr2 232422320 232422559 -20834024 - L2 LINE L2 0 3313 3072 1807 169 31 107 chr2 232422561 232423046 -20833537 + MSTB2 LTR MaLR 10 457 0 1992 289 188 31 chr2 232423048 232424198 -20832385 - L2 LINE L2 -233 3080 1751 2183 215 10 40 chr2 232424216 232424332 -20832251 - L1ME1 LINE L1 -5 6161 6043 1776 166 0 38 chr2 232424332 232424646 -20831937 - AluJb SINE Alu -10 302 1 2183 215 10 40 chr2 232424646 232425051 -20831532 - L1ME1 LINE L1 -123 6043 5656 195 361 10 21 chr2 232425625 232425722 -20830861 + MIR SINE MIR 59 154 -108 384 22 0 0 chr2 232425891 232425936 -20830647 + (TG)n Simple_repeat Simple_repeat 1 45 0 2422 220 17 86 chr2 232425983 232426643 -20829940 + MER90 LTR ERV1 1 614 0 195 233 0 0 chr2 232427759 232427802 -20828781 + L2 LINE L2 3271 3313 0 188 349 24 12 chr2 232427845 232427928 -20828655 - MIR SINE MIR -109 99 16 207 0 0 0 chr2 232428255 232428278 -20828305 + (A)n Simple_repeat Simple_repeat 1 23 0 1025 50 0 28 chr2 232428437 232428578 -20828005 + L1PA5 LINE L1 6012 6148 -6 520 141 153 51 chr2 232428719 232428868 -20827715 + MER5A DNA MER1_type 4 173 -16 212 163 0 20 chr2 232429561 232429610 -20826973 + CT-rich Low_complexity Low_complexity 3 50 0 733 176 8 8 chr2 232430554 232430685 -20825898 - FLAM_A SINE Alu -2 131 1 26 0 0 0 chr2 232430694 232430720 -20825863 + AT_rich Low_complexity Low_complexity 1 26 0 2184 85 0 0 chr2 232430769 232431062 -20825521 - L1PA8 LINE L1 -11 6161 5869 1381 35 0 0 chr2 232431062 232431233 -20825350 + L1PA8 LINE L1 5691 5861 -311 242 323 77 39 chr2 232431645 232431800 -20824783 - MIR SINE MIR -13 249 89 250 375 29 0 chr2 232431882 232432018 -20824565 - MIR SINE MIR -13 249 110 360 211 0 67 chr2 232432391 232432481 -20824102 + L2 LINE L2 3180 3263 -50 525 284 179 5 chr2 232433042 232433260 -20823323 - MIR SINE MIR -1 261 6 852 204 42 23 chr2 232433300 232433740 -20822843 - Charlie4a DNA MER1_type -3 505 26 474 18 0 0 chr2 232436194 232436249 -20820334 + (TG)n Simple_repeat Simple_repeat 2 56 0 2486 50 0 7 chr2 232436284 232436585 -20819998 + AluY SINE Alu 1 299 -12 230 324 135 24 chr2 232438587 232438757 -20817826 + L3b LINE CR1 1178 1366 -217 196 172 0 103 chr2 232439327 232439385 -20817198 - L2 LINE L2 -3 3310 3259 801 142 0 0 chr2 232439438 232439551 -20817032 + FLAM_C SINE Alu 2 114 -19 252 0 0 0 chr2 232439553 232439581 -20817002 + (CA)n Simple_repeat Simple_repeat 1 28 0 297 236 6 91 chr2 232439614 232439779 -20816804 - L1ME4a LINE L1 -25 6096 5946 231 250 22 22 chr2 232439782 232439874 -20816709 - L1ME4a LINE L1 -236 5885 5794 204 274 192 0 chr2 232440002 232440075 -20816508 - MIR SINE MIR -74 188 102 348 83 0 0 chr2 232440124 232440172 -20816411 + (TTAGGG)n Simple_repeat Simple_repeat 2 49 0 215 271 78 39 chr2 232440440 232440569 -20816014 - MIR SINE MIR -34 228 95 493 318 110 17 chr2 232440778 232441014 -20815569 - MIR SINE MIR -2 260 3 1902 170 23 20 chr2 232441143 232441496 -20815087 + MLT1A1 LTR MaLR 12 365 0 572 73 12 0 chr2 232441743 232441825 -20814758 + (TAGA)n Simple_repeat Simple_repeat 2 84 0 1790 161 3 20 chr2 232441968 232442272 -20814311 + AluSx SINE Alu 6 304 -8 2088 101 7 39 chr2 232442727 232443034 -20813549 - AluSg SINE Alu -13 297 1 214 375 0 10 chr2 232443059 232443163 -20813420 + L2 LINE L2 2688 2790 -524 975 110 0 0 chr2 232443226 232443353 -20813230 + AluSq/x SINE Alu 1 127 -186 258 348 95 34 chr2 232444320 232444731 -20811852 + L2 LINE L2 1365 1800 -1514 395 291 68 20 chr2 232444736 232444884 -20811699 - MER5A DNA MER1_type 0 189 35 590 336 75 23 chr2 232444901 232445168 -20811415 + L2 LINE L2 1807 2106 -1208 1092 210 128 63 chr2 232445168 232445534 -20811049 - MLT1B LTR MaLR 0 390 1 590 336 75 23 chr2 232445534 232445694 -20810889 + L2 LINE L2 2106 2256 -1058 728 264 59 46 chr2 232445996 232446235 -20810348 + MIR SINE MIR 21 262 0 317 207 6 63 chr2 232446332 232446471 -20810112 + L1MB8 LINE L1 6049 6183 -1 186 133 0 0 chr2 232446866 232446896 -20809687 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 2036 111 11 4 chr2 232447134 232447465 -20809118 - AluSc SINE Alu 0 333 1 26 0 0 0 chr2 232447468 232447494 -20809089 + AT_rich Low_complexity Low_complexity 1 26 0 708 264 38 29 chr2 232447504 232447921 -20808662 - L1MC5 LINE L1 -210 7751 7331 1015 176 29 10 chr2 232447925 232448130 -20808453 - LTR40b LTR ERVL -1 461 253 315 189 0 0 chr2 232448133 232448186 -20808397 - MER5B DNA MER1_type -125 53 1 197 339 17 61 chr2 232448186 232448295 -20808288 + L2 LINE L2 3194 3297 -16 507 237 118 38 chr2 232448320 232448506 -20808077 - MIR SINE MIR -57 205 5 398 232 60 93 chr2 232448619 232448770 -20807813 - MIR3 SINE MIR -16 192 47 2057 144 0 13 chr2 232449276 232449589 -20806994 + AluSg SINE Alu 1 309 -1 323 275 100 45 chr2 232449740 232449940 -20806643 - L2 LINE L2 0 3313 3103 206 326 0 0 chr2 232450014 232450063 -20806520 - L2 LINE L2 -1412 1902 1854 180 195 73 0 chr2 232450061 232450102 -20806481 - L2 LINE L2 -15 3298 3255 * 305 292 119 27 chr2 232450922 232451107 -20805476 + MLT1K LTR MaLR 145 346 -242 205 374 121 35 chr2 232451583 232451781 -20804802 - L2 LINE L2 -183 3089 2875 1392 74 5 35 chr2 232452018 232452221 -20804362 - THE1B LTR MaLR -167 197 1 440 212 34 8 chr2 232452279 232452397 -20804186 + Charlie1 DNA MER1_type 8 128 -2633 2662 191 38 15 chr2 232452408 232452889 -20803694 + Charlie1 DNA MER1_type 2084 2586 -175 1590 188 147 26 chr2 232452889 232453304 -20803279 + MLT1C LTR MaLR 1 465 -2 2662 191 38 15 chr2 232453304 232453483 -20803100 + Charlie1 DNA MER1_type 2586 2759 -2 302 315 10 12 chr2 232453560 232453674 -20802909 + MER5B DNA MER1_type 63 179 -10 23 33 0 0 chr2 232454392 232454422 -20802161 + AT_rich Low_complexity Low_complexity 1 30 0 355 326 74 33 chr2 232455664 232455906 -20800677 - MLT1K LTR MaLR -178 410 159 225 94 0 0 chr2 232458086 232458118 -20798465 + (GGA)n Simple_repeat Simple_repeat 2 33 0 245 322 83 16 chr2 232459432 232459553 -20797030 - MIR3 SINE MIR -72 136 8 1470 111 10 5 chr2 232460365 232460573 -20796010 - AluSg/x SINE Alu -2 310 102 288 65 87 0 chr2 232460714 232460760 -20795823 + MADE1 DNA Mariner 31 80 0 192 40 0 0 chr2 232460993 232461018 -20795565 + (TG)n Simple_repeat Simple_repeat 1 25 0 356 302 158 57 chr2 232461239 232461401 -20795182 + L2 LINE L2 2814 2958 -355 2857 10 0 0 chr2 232461401 232461711 -20794872 - AluYb8 SINE Alu -8 310 1 356 302 158 57 chr2 232461711 232461836 -20794747 + L2 LINE L2 2958 3069 -244 2743 96 0 3 chr2 232461836 232462201 -20794382 + THE1B LTR MaLR 1 364 0 356 302 158 57 chr2 232462201 232462316 -20794267 + L2 LINE L2 3069 3258 -55 244 111 37 0 chr2 232462328 232462382 -20794201 + (TA)n Simple_repeat Simple_repeat 2 57 0 25 0 0 0 chr2 232462508 232462533 -20794050 + AT_rich Low_complexity Low_complexity 1 25 0 423 284 39 0 chr2 232462931 232463086 -20793497 + MER103 DNA DNA 4 164 -2 2321 90 0 0 chr2 232463272 232463572 -20793011 + AluY SINE Alu 1 300 -11 216 97 0 0 chr2 232463572 232463603 -20792980 + (TA)n Simple_repeat Simple_repeat 1 31 0 2980 208 81 11 chr2 232463610 232464436 -20792147 + L1ME1 LINE L1 5278 6161 -5 252 0 0 0 chr2 232464575 232464603 -20791980 + (CA)n Simple_repeat Simple_repeat 2 29 0 300 111 0 0 chr2 232464721 232464766 -20791817 + (TG)n Simple_repeat Simple_repeat 2 46 0 331 293 134 6 chr2 232464788 232464929 -20791654 + L2 LINE L2 2589 2753 -561 237 65 0 0 chr2 232464929 232464960 -20791623 + (TG)n Simple_repeat Simple_repeat 2 32 0 331 293 134 6 chr2 232464960 232464975 -20791608 + L2 LINE L2 2753 2765 -549 267 93 0 0 chr2 232464976 232465019 -20791564 + (TC)n Simple_repeat Simple_repeat 1 43 0 1035 311 76 15 chr2 232465103 232465542 -20791041 - L2 LINE L2 -257 3056 2589 614 349 46 4 chr2 232465567 232465808 -20790775 + MIR SINE MIR 11 261 -1 524 274 39 6 chr2 232466135 232466314 -20790269 + LTR16C LTR ERVL 307 491 0 472 277 104 34 chr2 232466667 232466976 -20789607 + MLT1G1 LTR MaLR 1 291 -299 448 220 45 15 chr2 232467043 232467175 -20789408 + MLT1G1 LTR MaLR 403 538 -17 885 214 5 11 chr2 232468228 232468415 -20788168 - MER5A DNA MER1_type 0 189 4 433 284 28 28 chr2 232468785 232468961 -20787622 + MLT1K LTR MaLR 213 388 -200 966 241 206 21 chr2 232468962 232469415 -20787168 + MLT1G LTR MaLR 2 507 -83 417 223 29 86 chr2 232469522 232469697 -20786886 + MLT1K LTR MaLR 412 576 -12 23 0 0 0 chr2 232470164 232470187 -20786396 + AT_rich Low_complexity Low_complexity 1 23 0 5021 46 0 0 chr2 232471348 232471956 -20784627 - L1PA4 LINE L1 -3 6152 5545 1763 171 44 44 chr2 232472428 232472813 -20783770 + MLT1B LTR MaLR 1 385 -5 24 32 0 0 chr2 232473568 232473599 -20782984 + AT_rich Low_complexity Low_complexity 1 31 0 491 280 38 19 chr2 232476161 232476372 -20780211 + LTR16C LTR ERVL 274 488 -3 216 0 0 0 chr2 232477021 232477045 -20779538 + (CA)n Simple_repeat Simple_repeat 2 25 0 208 125 50 0 chr2 232477085 232477125 -20779458 + A-rich Low_complexity Low_complexity 4 45 0 1257 97 56 0 chr2 232478765 232478960 -20777623 + L1PA10 LINE L1 5960 6165 -3 37 23 0 0 chr2 232479018 232479062 -20777521 + AT_rich Low_complexity Low_complexity 1 44 0 33 73 0 0 chr2 232480181 232480249 -20776334 + AT_rich Low_complexity Low_complexity 1 68 0 463 268 6 51 chr2 232480381 232480538 -20776045 + MER5B DNA MER1_type 6 155 -23 381 350 43 18 chr2 232480598 232480761 -20775822 + MIR3 SINE MIR 3 169 -39 189 74 0 0 chr2 232481471 232481498 -20775085 + (TA)n Simple_repeat Simple_repeat 2 28 0 2335 94 14 0 chr2 232483376 232483673 -20772910 - AluSx SINE Alu -11 301 1 424 307 22 48 chr2 232484339 232484710 -20771873 + L1MC4 LINE L1 5266 5626 -2182 388 263 68 58 chr2 232484783 232484973 -20771610 + L1MC4 LINE L1 5768 5959 -1849 197 286 61 0 chr2 232485112 232485161 -20771422 + L2 LINE L2 3038 3089 -183 324 364 64 0 chr2 232486311 232486451 -20770132 + MIR3 SINE MIR 34 182 -26 5517 146 37 7 chr2 232487960 232488975 -20767608 + L1MC1 LINE L1 5288 6333 0 2002 246 75 25 chr2 232489118 232489813 -20766770 - L1ME3A LINE L1 -23 6147 5418 654 95 0 0 chr2 232490067 232490162 -20766421 + (TAGA)n Simple_repeat Simple_repeat 3 97 0 1519 173 4 4 chr2 232490164 232490430 -20766153 - MLT1A1 LTR MaLR -6 359 94 2002 148 0 7 chr2 232490676 232490974 -20765609 - AluSg SINE Alu -14 296 1 2022 149 3 0 chr2 232491477 232491786 -20764797 - AluSx SINE Alu -2 310 1 583 92 0 0 chr2 232492036 232492112 -20764471 + AluS SINE Alu 12 87 -225 2061 150 0 0 chr2 232492649 232492936 -20763647 + AluSx SINE Alu 1 287 -25 1229 88 0 11 chr2 232492946 232493128 -20763455 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 640 129 16 16 chr2 232493128 232493252 -20763331 + GA-rich Low_complexity Low_complexity 1 124 0 257 0 30 0 chr2 232493333 232493366 -20763217 + (TAGA)n Simple_repeat Simple_repeat 2 35 0 328 290 0 11 chr2 232493366 232493459 -20763124 + L1MC4 LINE L1 6616 6707 -1335 312 179 24 24 chr2 232493674 232493758 -20762825 + L1ME3A LINE L1 5873 5956 -214 25 0 0 0 chr2 232493844 232493869 -20762714 + AT_rich Low_complexity Low_complexity 1 25 0 957 256 26 82 chr2 232493870 232494410 -20762173 - L1MC4 LINE L1 -28 8014 7505 3458 56 7 5 chr2 232494620 232495069 -20761514 + L1PA8 LINE L1 5723 6172 0 22 70 0 0 chr2 232495989 232496032 -20760551 + AT_rich Low_complexity Low_complexity 1 43 0 744 200 0 0 chr2 232496979 232497104 -20759479 + FLAM_A SINE Alu 1 125 -8 24 0 0 0 chr2 232497108 232497132 -20759451 + AT_rich Low_complexity Low_complexity 1 24 0 426 300 114 32 chr2 232497552 232497832 -20758751 + L2 LINE L2 3011 3313 0 2313 93 0 0 chr2 232498609 232498899 -20757684 + AluSx SINE Alu 16 305 -7 2392 95 0 0 chr2 232500330 232500625 -20755958 + AluSp SINE Alu 1 295 -18 1570 190 10 24 chr2 232501033 232501342 -20755241 + AluJo SINE Alu 1 305 0 206 288 50 58 chr2 232501378 232501517 -20755066 - MIR SINE MIR 0 262 125 1527 191 14 24 chr2 232501937 232502245 -20754338 + AluJo SINE Alu 1 305 0 337 319 71 38 chr2 232502281 232502491 -20754092 - MIR SINE MIR 0 262 46 2246 126 22 25 chr2 232503180 232503545 -20753038 - THE1B LTR MaLR 0 364 1 283 273 23 55 chr2 232503584 232503712 -20752871 + L1ME LINE L1 5695 5818 -303 702 227 61 0 chr2 232506132 232506361 -20750222 + MER33 DNA MER1_type 40 282 -42 669 221 83 0 chr2 232506364 232506509 -20750074 + FAM SINE Alu 2 158 -17 228 176 20 0 chr2 232506529 232506580 -20750003 + MER33 DNA MER1_type 311 362 -1 241 286 86 43 chr2 232506660 232506800 -20749783 + MIR SINE MIR 78 223 -39 23 0 0 0 chr2 232506810 232506833 -20749750 + AT_rich Low_complexity Low_complexity 1 23 0 1128 160 23 27 chr2 232507664 232507883 -20748700 + MER20 DNA MER1_type 1 218 -1 471 282 51 13 chr2 232508428 232508584 -20747999 + MIR SINE MIR 89 250 -12 193 301 47 88 chr2 232509107 232509300 -20747283 - MIR SINE MIR -45 217 33 252 0 0 0 chr2 232510032 232510060 -20746523 + (TGAA)n Simple_repeat Simple_repeat 4 31 0 2001 115 0 44 chr2 232510751 232511067 -20745516 + AluSq SINE Alu 1 303 0 21 0 0 0 chr2 232511990 232512011 -20744572 + AT_rich Low_complexity Low_complexity 1 21 0 605 103 0 86 chr2 232512088 232512204 -20744379 - L1MA3 LINE L1 0 6305 6200 354 23 0 0 chr2 232513229 232513272 -20743311 + (TG)n Simple_repeat Simple_repeat 1 43 0 3163 248 59 16 chr2 232513358 232514538 -20742045 - L1MEc LINE L1 -4933 1463 233 243 203 153 0 chr2 232514571 232514630 -20741953 - L1MEc LINE L1 -6293 103 36 250 280 11 11 chr2 232514827 232514920 -20741663 + MLT1L LTR MaLR 521 613 -2 360 345 76 6 chr2 232514937 232515108 -20741475 - MIR SINE MIR -52 210 28 276 227 68 83 chr2 232515339 232515439 -20741144 + L3 LINE CR1 1346 1445 -132 2241 104 0 16 chr2 232515439 232515747 -20740836 - AluSq SINE Alu -10 303 1 276 227 68 83 chr2 232515747 232515778 -20740805 + L3 LINE CR1 1445 1475 -102 1340 181 145 22 chr2 232516557 232516971 -20739612 + Charlie4a DNA MER1_type 43 507 -1 26 0 0 0 chr2 232517138 232517164 -20739419 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr2 232517689 232517710 -20738873 + AT_rich Low_complexity Low_complexity 1 21 0 1031 106 0 0 chr2 232519208 232519340 -20737243 + AluSq/x SINE Alu 1 132 -181 2011 135 0 0 chr2 232519343 232519624 -20736959 + AluSq SINE Alu 1 281 -32 225 0 0 0 chr2 232519625 232519650 -20736933 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 570 259 42 42 chr2 232520055 232520221 -20736362 + MIR SINE MIR 83 248 -14 341 245 102 10 chr2 232520409 232520507 -20736076 - L2 LINE L2 -3 3310 3204 240 149 0 0 chr2 232520609 232520656 -20735927 - AluSx SINE Alu 0 301 255 1037 157 6 17 chr2 232520656 232520828 -20735755 - AluSx SINE Alu -142 170 1 658 256 37 41 chr2 232521185 232521454 -20735129 + Charlie7 DNA MER1_type 58 325 -2287 987 152 47 8 chr2 232521475 232521823 -20734760 - MSTA LTR MaLR 0 428 1 394 233 26 0 chr2 232521827 232521943 -20734640 + Charlie7 DNA MER1_type 346 464 -2148 4547 134 5 7 chr2 232521955 232522700 -20733883 + L1PB2 LINE L1 5406 6149 -2 911 257 46 29 chr2 232522839 232523185 -20733398 + Charlie7 DNA MER1_type 529 880 -1732 681 235 68 124 chr2 232523195 232523726 -20732857 + Charlie7 DNA MER1_type 1320 1820 -792 9769 35 0 0 chr2 232523742 232525544 -20731039 + L1PA5 LINE L1 4146 5947 -208 1620 81 4 13 chr2 232525655 232525891 -20730692 + L1PA5 LINE L1 5920 6153 -1 927 264 46 6 chr2 232525925 232526274 -20730309 + Charlie7 DNA MER1_type 1835 2197 -415 35841 30 17 1 chr2 232526288 232532319 -20724264 - L1PA2 LINE L1 0 6155 2 589 251 23 75 chr2 232532320 232532666 -20723917 + Charlie7 DNA MER1_type 2182 2509 -103 2327 60 4 0 chr2 232532686 232533023 -20723560 + AluY SINE Alu 1 338 0 489 329 0 19 chr2 232533146 232533304 -20723279 + MER5A DNA MER1_type 4 158 -31 207 0 0 0 chr2 232533304 232533327 -20723256 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2254 58 4 0 chr2 232533330 232533605 -20722978 - AluY SINE Alu -35 276 1 187 244 0 0 chr2 232533605 232533646 -20722937 + MER5A DNA MER1_type 146 186 -3 1387 179 36 4 chr2 232534829 232535109 -20721474 - MLT2C1 LTR ERVL -108 289 1 349 275 0 22 chr2 232535163 232535254 -20721329 - MIR SINE MIR -111 151 63 335 277 0 0 chr2 232535505 232535588 -20720995 + MIR SINE MIR 32 114 -148 794 201 107 17 chr2 232535598 232535832 -20720751 + MIR SINE MIR 8 262 0 205 291 92 64 chr2 232535833 232535974 -20720609 + MIR SINE MIR 116 260 -2 1218 161 54 93 chr2 232536353 232536739 -20719844 + MER58D DNA MER1_type 16 386 0 332 306 18 9 chr2 232537557 232537668 -20718915 - L1MC4 LINE L1 -1340 6702 6591 291 313 31 0 chr2 232538856 232538984 -20717599 + (TATATG)n Simple_repeat Simple_repeat 6 137 0 2556 119 56 15 chr2 232539050 232539461 -20717122 - MSTA LTR MaLR 0 428 1 838 247 53 16 chr2 232539610 232539853 -20716730 + LTR16A1 LTR ERVL 206 457 0 1774 206 37 2 chr2 232540476 232540878 -20715705 + L1MB5 LINE L1 5759 6174 0 731 308 55 20 chr2 232541798 232542305 -20714278 + HAL1b LINE L1 73 597 -751 222 120 0 60 chr2 232542535 232542585 -20713998 + (TAA)n Simple_repeat Simple_repeat 2 48 0 423 253 11 28 chr2 232542876 232543058 -20713525 + (TA)n Simple_repeat Simple_repeat 2 180 0 1369 241 35 108 chr2 232543095 232544072 -20712511 + L1MC5 LINE L1 6678 7488 -473 410 302 27 7 chr2 232544077 232544226 -20712357 - LTR16A LTR ERVL -11 439 288 829 237 35 22 chr2 232544372 232544600 -20711983 - MLT1E LTR MaLR -350 243 13 304 366 34 17 chr2 232544810 232544985 -20711598 + L1ME3A LINE L1 5993 6170 0 1066 119 34 0 chr2 232545043 232545219 -20711364 - L1MA3 LINE L1 0 6305 6124 2400 111 26 3 chr2 232545219 232545605 -20710978 - L1MA2 LINE L1 -229 6075 5681 216 0 0 0 chr2 232546046 232546070 -20710513 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 616 294 143 51 chr2 232546163 232546710 -20709873 - MLT1L LTR MaLR -4 611 15 216 0 0 0 chr2 232546726 232546750 -20709833 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 293 173 0 27 chr2 232546753 232546828 -20709755 - LTR30 LTR ERV1 -98 624 552 2149 143 8 27 chr2 232546996 232547367 -20709216 - THE1B LTR MaLR 0 364 1 837 296 121 34 chr2 232547767 232547855 -20708728 + L2 LINE L2 2578 2657 -656 2499 103 27 8 chr2 232547855 232548223 -20708360 + THE1C LTR MaLR 1 375 0 837 296 121 34 chr2 232548223 232548790 -20707793 + L2 LINE L2 2657 3296 -17 25 31 0 0 chr2 232548814 232548846 -20707737 + AT_rich Low_complexity Low_complexity 1 32 0 1556 149 114 6 chr2 232549022 232549337 -20707246 - MLT1A1 LTR MaLR -16 349 1 213 39 0 0 chr2 232551072 232551098 -20705485 + (TTG)n Simple_repeat Simple_repeat 2 27 0 304 218 13 56 chr2 232553878 232554002 -20702581 + L1MC/D LINE L1 5597 5716 -405 210 192 27 14 chr2 232554232 232554305 -20702278 + (TA)n Simple_repeat Simple_repeat 1 74 0 1018 289 55 107 chr2 232554494 232554725 -20701858 - L2 LINE L2 -345 2969 2728 270 116 0 0 chr2 232554725 232554768 -20701815 + (CA)n Simple_repeat Simple_repeat 2 44 0 1018 289 55 107 chr2 232554768 232555246 -20701337 - L2 LINE L2 -586 2728 2297 423 173 13 0 chr2 232555247 232555322 -20701261 + MLT1I LTR MaLR 78 153 -256 991 63 0 14 chr2 232555498 232555640 -20700943 + (AATAG)n Simple_repeat Simple_repeat 5 144 0 313 304 101 14 chr2 232556317 232556455 -20700128 - MIR SINE MIR -65 197 48 274 297 95 7 chr2 232556528 232556676 -20699907 + L1MC/D LINE L1 5705 5865 -1943 2145 118 19 32 chr2 232556908 232557273 -20699310 + AluSx SINE Alu 1 361 0 1054 236 67 57 chr2 232557323 232557726 -20698857 + MLT1I LTR MaLR 1 407 -2 1414 203 11 4 chr2 232557738 232557999 -20698584 + AluJo SINE Alu 16 278 -34 648 0 0 0 chr2 232558000 232558072 -20698511 + (TC)n Simple_repeat Simple_repeat 2 73 0 297 0 0 0 chr2 232558071 232558104 -20698479 + (TA)n Simple_repeat Simple_repeat 2 34 0 * 980 178 0 0 chr2 232558106 232558258 -20698325 + FRAM SINE Alu 1 152 -14 305 247 34 11 chr2 232558380 232558469 -20698114 - L2 LINE L2 0 3313 3223 1532 48 0 5 chr2 232558469 232558655 -20697928 + AluY SINE Alu 1 185 -126 482 91 0 0 chr2 232558655 232558721 -20697862 + AluY SINE Alu 235 300 -12 900 183 183 0 chr2 232558895 232559097 -20697486 - MER8 DNA MER2_type 0 239 1 370 291 87 58 chr2 232560767 232560973 -20695610 - MIR SINE MIR -30 232 21 354 337 119 6 chr2 232561000 232561315 -20695268 + L2 LINE L2 2625 2982 -290 188 250 0 23 chr2 232561583 232561627 -20694956 - MIR SINE MIR -150 58 16 301 207 12 24 chr2 232561803 232561885 -20694698 - MLT1L LTR MaLR -516 99 19 2372 85 0 13 chr2 232561970 232562277 -20694306 + AluY SINE Alu 1 303 -8 2118 131 0 0 chr2 232562730 232563021 -20693562 + AluSx SINE Alu 12 302 -10 322 306 109 73 chr2 232563168 232563416 -20693167 - MIR SINE MIR -2 260 4 326 260 78 94 chr2 232563650 232563842 -20692741 + L2 LINE L2 2686 2874 -440 4722 144 51 25 chr2 232564016 232565219 -20691364 - L1PA16 LINE L1 -1 6165 4927 271 320 58 65 chr2 232565231 232565509 -20691074 + L2 LINE L2 1345 1620 -1694 1655 211 32 37 chr2 232565522 232565987 -20690596 - MLT1C LTR MaLR -4 463 1 722 329 58 33 chr2 232566037 232566518 -20690065 + L2 LINE L2 2187 2679 -635 229 327 52 65 chr2 232566926 232567079 -20689504 + L2 LINE L2 2720 2870 -444 289 327 41 54 chr2 232567920 232568114 -20688469 + MIR SINE MIR 17 206 -56 243 88 0 0 chr2 232568381 232568415 -20688168 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 26 30 0 0 chr2 232568603 232568636 -20687947 + AT_rich Low_complexity Low_complexity 1 33 0 1985 134 17 0 chr2 232568638 232568930 -20687653 + AluSx SINE Alu 1 297 -15 1912 178 0 48 chr2 232570337 232570730 -20685853 - MLT1A2 LTR MaLR 0 374 1 431 336 48 4 chr2 232570772 232571001 -20685582 + LTR33 LTR ERVL 23 261 -260 365 187 60 45 chr2 232571080 232571214 -20685369 + LTR33 LTR ERVL 380 515 -6 2146 100 3 7 chr2 232571946 232572237 -20684346 - AluSx SINE Alu -2 310 21 189 0 0 0 chr2 232573415 232573436 -20683147 + (TC)n Simple_repeat Simple_repeat 2 22 0 401 265 0 0 chr2 232573763 232573846 -20682737 - L2 LINE L2 0 3272 3190 459 318 30 25 chr2 232575058 232575256 -20681327 + MIR SINE MIR 13 211 -51 702 240 20 5 chr2 232575450 232575650 -20680933 + MER3 DNA MER1_type 5 207 -2 454 250 133 36 chr2 232575701 232575897 -20680686 + MIR SINE MIR 2 216 -46 201 271 17 0 chr2 232575988 232576047 -20680536 + L2 LINE L2 3236 3295 -18 234 153 56 28 chr2 232576052 232576124 -20680459 + GA-rich Low_complexity Low_complexity 4 77 0 22 0 0 0 chr2 232576174 232576196 -20680387 + AT_rich Low_complexity Low_complexity 1 22 0 252 86 0 0 chr2 232577718 232577753 -20678830 + (CA)n Simple_repeat Simple_repeat 2 36 0 204 211 40 13 chr2 232579072 232579148 -20677435 + GA-rich Low_complexity Low_complexity 6 83 0 212 232 18 71 chr2 232579693 232579749 -20676834 + L2 LINE L2 3242 3294 -19 396 0 0 0 chr2 232579821 232579865 -20676718 + (TA)n Simple_repeat Simple_repeat 2 45 0 28 48 0 0 chr2 232580876 232580918 -20675665 + AT_rich Low_complexity Low_complexity 1 42 0 24 32 0 0 chr2 232583893 232583924 -20672659 + AT_rich Low_complexity Low_complexity 1 31 0 357 125 0 0 chr2 232584774 232584830 -20671753 + (TA)n Simple_repeat Simple_repeat 1 56 0 1248 212 6 100 chr2 232586386 232586707 -20669876 + AluSp SINE Alu 1 291 -22 1833 173 14 0 chr2 232587683 232587972 -20668611 - AluJb SINE Alu -19 293 1 182 341 136 11 chr2 232588112 232588200 -20668383 - MIR SINE MIR -132 130 32 381 242 53 0 chr2 232588545 232588640 -20667943 + MER103 DNA DNA 2 101 -65 309 26 0 0 chr2 232589427 232589465 -20667118 + (CA)n Simple_repeat Simple_repeat 2 39 0 207 257 76 67 chr2 232592761 232592866 -20663717 - L3 LINE CR1 -18 1559 1454 243 61 0 0 chr2 232593501 232593534 -20663049 + (CA)n Simple_repeat Simple_repeat 2 34 0 211 372 44 18 chr2 232594233 232594346 -20662237 + MIR SINE MIR 23 138 -70 2026 94 40 0 chr2 232599215 232599492 -20657091 - AluSx SINE Alu -14 298 11 544 304 29 29 chr2 232602393 232602600 -20653983 + MIR SINE MIR 54 260 -2 231 233 60 160 chr2 232603833 232603983 -20652600 - MIR3 SINE MIR -42 166 32 1758 155 14 40 chr2 232604117 232604413 -20652170 + AluJb SINE Alu 1 288 -24 1645 177 0 21 chr2 232605467 232605772 -20650811 + AluJo SINE Alu 10 308 0 23 78 0 0 chr2 232605923 232605974 -20650609 + AT_rich Low_complexity Low_complexity 1 51 0 227 198 33 50 chr2 232606014 232606135 -20650448 + (TTATA)n Simple_repeat Simple_repeat 4 122 0 1725 191 28 0 chr2 232606707 232606995 -20649588 + AluJb SINE Alu 1 296 -16 2699 34 0 3 chr2 232607048 232607368 -20649215 + L1PA7 LINE L1 5823 6141 -13 2322 100 3 0 chr2 232607380 232607680 -20648903 + AluSg SINE Alu 1 301 -9 669 237 29 23 chr2 232608418 232608591 -20647992 + MIR SINE MIR 71 244 -18 294 211 0 0 chr2 232609146 232609203 -20647380 + MER31A LTR ERV1 357 413 -72 22 0 0 0 chr2 232609672 232609694 -20646889 + AT_rich Low_complexity Low_complexity 1 22 0 466 245 7 22 chr2 232609902 232610041 -20646542 - MER45A DNA AcHobo -34 144 8 26 64 0 0 chr2 232611053 232611100 -20645483 + AT_rich Low_complexity Low_complexity 1 47 0 761 227 23 23 chr2 232611324 232611500 -20645083 - MER5A DNA MER1_type 0 189 14 331 274 170 0 chr2 232612043 232612149 -20644434 + L2 LINE L2 3187 3310 -3 870 147 0 0 chr2 232613059 232613188 -20643395 - FLAM_A SINE Alu -4 138 10 355 254 174 14 chr2 232613935 232614073 -20642510 - MIR SINE MIR -80 182 23 318 50 0 0 chr2 232614125 232614165 -20642418 + (CA)n Simple_repeat Simple_repeat 1 40 0 25 31 0 0 chr2 232616272 232616304 -20640279 + AT_rich Low_complexity Low_complexity 1 32 0 223 290 61 46 chr2 232619202 232619333 -20637250 - MIR SINE MIR -36 226 94 214 238 143 16 chr2 232620112 232620175 -20636408 - MIR SINE MIR -55 153 83 276 321 0 0 chr2 232620175 232620256 -20636327 - L2 LINE L2 -6 3266 3186 308 325 112 5 chr2 232621115 232621312 -20635271 + MIR SINE MIR 35 252 -10 1885 182 7 0 chr2 232621670 232621972 -20634611 + AluSx SINE Alu 1 304 -8 281 165 21 21 chr2 232622418 232622492 -20634091 + GA-rich Low_complexity Low_complexity 5 81 -20 2049 121 0 37 chr2 232622492 232622790 -20633793 + AluSx SINE Alu 1 287 -25 281 165 21 21 chr2 232622790 232622812 -20633771 + GA-rich Low_complexity Low_complexity 80 101 0 303 146 0 0 chr2 232623380 232623435 -20633148 + (TGGA)n Simple_repeat Simple_repeat 3 57 0 221 345 46 91 chr2 232624247 232624444 -20632139 - MIR3 SINE MIR -12 196 9 211 267 175 33 chr2 232624688 232624808 -20631775 - MIR SINE MIR -62 200 64 225 246 0 31 chr2 232626344 232626409 -20630174 - MER69 DNA AcHobo -1 2525 2463 341 258 41 0 chr2 232626413 232626546 -20630037 - MER69 DNA AcHobo -1079 147 1 207 0 0 0 chr2 232627896 232627919 -20628664 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 6178 29 0 7 chr2 232627919 232628656 -20627927 - L1PA4 LINE L1 -11 6144 5413 974 209 128 7 chr2 232628816 232629089 -20627494 + MER58B DNA MER1_type 28 333 -8 536 230 120 18 chr2 232629097 232629290 -20627293 - MIR SINE MIR -1 261 44 1602 157 31 53 chr2 232630441 232630760 -20625823 - AluJo SINE Alu 0 312 1 207 286 10 41 chr2 232630793 232630891 -20625692 - L2 LINE L2 0 3272 3178 21 0 0 0 chr2 232630950 232630971 -20625612 + AT_rich Low_complexity Low_complexity 1 21 0 2181 132 0 0 chr2 232631582 232631886 -20624697 - AluSx SINE Alu -7 305 2 285 266 14 56 chr2 232632194 232632337 -20624246 + MER5A DNA MER1_type 28 164 -25 1731 87 111 66 chr2 232632584 232632872 -20623711 - AluY SINE Alu -10 301 1 344 281 31 0 chr2 232635044 232635140 -20621443 + MIR SINE MIR 110 208 -54 215 240 21 94 chr2 232636621 232636693 -20619890 + MIR SINE MIR 58 123 -139 1409 171 52 28 chr2 232636693 232636979 -20619604 - AluJo SINE Alu -19 293 1 215 240 21 94 chr2 232636979 232637002 -20619581 + MIR SINE MIR 123 146 -116 2159 123 17 0 chr2 232637177 232637479 -20619104 - AluSx SINE Alu 0 312 6 207 100 0 0 chr2 232638199 232638229 -20618354 + (A)n Simple_repeat Simple_repeat 1 30 0 1392 228 23 53 chr2 232638523 232638918 -20617665 - L1ME2 LINE L1 -91 6073 5691 3354 211 41 33 chr2 232639203 232640679 -20615904 + L1ME1 LINE L1 4613 6102 -64 2504 177 20 0 chr2 232640698 232641156 -20615427 + L1MB5 LINE L1 5697 6163 -11 329 349 56 59 chr2 232641441 232641779 -20614804 + L2 LINE L2 2887 3223 -49 2011 69 54 0 chr2 232641986 232642247 -20614336 + AluY SINE Alu 18 292 -19 399 41 0 0 chr2 232642247 232642296 -20614287 + (GGAA)n Simple_repeat Simple_repeat 1 49 0 730 183 14 7 chr2 232642597 232642739 -20613844 - MER69 DNA AcHobo -4 2522 2380 252 269 30 0 chr2 232642964 232643031 -20613552 - MIR SINE MIR -62 200 132 230 298 157 33 chr2 232643132 232643253 -20613330 + MIR SINE MIR 6 141 -121 21 71 0 0 chr2 232644169 232644211 -20612372 + AT_rich Low_complexity Low_complexity 1 42 0 223 239 0 0 chr2 232648037 232648083 -20608500 + (ATGGTG)n Simple_repeat Simple_repeat 5 50 0 31 0 0 0 chr2 232650925 232650956 -20605627 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr2 232651679 232651702 -20604881 + AT_rich Low_complexity Low_complexity 1 23 0 197 333 0 20 chr2 232653157 232653256 -20603327 - MIR3 SINE MIR -12 196 100 432 110 41 14 chr2 232653687 232653760 -20602823 - MER69 DNA AcHobo 0 2526 2452 1404 127 4 42 chr2 232654151 232654251 -20602332 - MER30 DNA MER1_type 0 230 128 2432 77 0 0 chr2 232654251 232654548 -20602035 + AluSc SINE Alu 1 297 -12 1404 127 4 42 chr2 232654548 232654683 -20601900 - MER30 DNA MER1_type -102 128 4 2235 102 0 10 chr2 232655557 232655851 -20600732 - AluSx SINE Alu -21 291 1 267 31 0 0 chr2 232655897 232655929 -20600654 + (TG)n Simple_repeat Simple_repeat 1 32 0 2129 138 0 0 chr2 232656526 232656824 -20599759 + AluSq SINE Alu 1 298 -15 220 176 0 0 chr2 232656824 232656858 -20599725 + polypurine Low_complexity Low_complexity 1 34 0 576 183 11 43 chr2 232656860 232657046 -20599537 + GA-rich Low_complexity Low_complexity 1 180 0 328 276 243 22 chr2 232659735 232660101 -20596482 + L1MC4a LINE L1 5725 6171 -1637 360 43 0 0 chr2 232661194 232661240 -20595343 + (TG)n Simple_repeat Simple_repeat 2 47 0 192 329 109 7 chr2 232661358 232661495 -20595088 - MIR SINE MIR -7 255 105 2313 109 0 0 chr2 232662541 232662834 -20593749 - AluSx SINE Alu -18 294 2 180 0 0 0 chr2 232663150 232663170 -20593413 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 209 83 28 0 chr2 232667365 232667401 -20589182 + (GGA)n Simple_repeat Simple_repeat 1 37 0 468 0 0 0 chr2 232668567 232668619 -20587964 + (TG)n Simple_repeat Simple_repeat 2 53 0 204 179 0 0 chr2 232671383 232671422 -20585161 + T-rich Low_complexity Low_complexity 1 39 0 459 0 0 0 chr2 232675883 232675915 -20580668 + (TG)n Simple_repeat Simple_repeat 1 83 0 459 0 0 0 chr2 232675915 232675966 -20580617 + (TG)n Simple_repeat Simple_repeat 2 52 0 262 246 16 0 chr2 232679575 232679636 -20576947 + GA-rich Low_complexity Low_complexity 1 62 0 243 224 47 0 chr2 232679915 232680000 -20576583 + (TG)n Simple_repeat Simple_repeat 1 89 0 239 143 41 0 chr2 232680930 232680979 -20575604 + GA-rich Low_complexity Low_complexity 2 52 0 212 147 0 0 chr2 232681580 232681614 -20574969 + (TTC)n Simple_repeat Simple_repeat 3 36 0 318 87 0 0 chr2 232682117 232682163 -20574420 + (CA)n Simple_repeat Simple_repeat 1 46 0 363 268 98 9 chr2 232684243 232684355 -20572228 - L2 LINE L2 -1 3271 3150 404 15 62 0 chr2 232685522 232685587 -20570996 + (TTTC)n Simple_repeat Simple_repeat 2 70 0 185 91 0 30 chr2 232685616 232685649 -20570934 + (TC)n Simple_repeat Simple_repeat 1 32 0 479 230 110 10 chr2 232685670 232685770 -20570813 - FLAM_C SINE Alu -27 116 7 471 304 114 0 chr2 232687056 232687240 -20569343 - MIR SINE MIR -14 248 44 180 0 0 0 chr2 232687513 232687533 -20569050 + (ATTG)n Simple_repeat Simple_repeat 4 23 0 2009 113 0 7 chr2 232687533 232687815 -20568768 - AluJo SINE Alu -32 280 1 372 43 0 0 chr2 232689146 232689192 -20567391 + (TG)n Simple_repeat Simple_repeat 2 47 0 225 0 0 0 chr2 232689193 232689218 -20567365 + (GA)n Simple_repeat Simple_repeat 2 26 0 603 224 16 71 chr2 232689390 232689573 -20567010 + MER5B DNA MER1_type 2 174 -4 441 329 66 24 chr2 232691257 232691546 -20565037 - L2 LINE L2 -8 3305 3005 318 247 0 82 chr2 232691610 232691707 -20564876 - MIR SINE MIR -77 185 97 22 80 0 0 chr2 232694132 232694182 -20562401 + AT_rich Low_complexity Low_complexity 1 50 0 204 192 13 39 chr2 232695167 232695245 -20561338 + (CCG)n Simple_repeat Simple_repeat 3 78 0 943 147 32 0 chr2 232698287 232698443 -20558140 - MER20 DNA MER1_type -2 217 57 569 140 170 10 chr2 232699017 232699117 -20557466 + Tigger4(Zombi) DNA MER2_type 2 117 -2614 23 0 0 0 chr2 232699118 232699141 -20557442 + AT_rich Low_complexity Low_complexity 1 23 0 2058 120 19 3 chr2 232699154 232699462 -20557121 + AluSq SINE Alu 1 313 0 197 211 19 0 chr2 232699464 232699516 -20557067 + (CATATA)n Simple_repeat Simple_repeat 4 56 0 232 159 16 16 chr2 232699536 232699599 -20556984 + (TA)n Simple_repeat Simple_repeat 2 64 0 1181 88 88 0 chr2 232699615 232699786 -20556797 + Tigger4(Zombi) DNA MER2_type 2546 2731 0 553 339 21 8 chr2 232700008 232700202 -20556381 + MIR SINE MIR 20 210 -52 185 286 18 0 chr2 232700293 232700349 -20556234 - MIR SINE MIR -141 121 65 764 171 0 20 chr2 232700715 232700861 -20555722 + L1MC3 LINE L1 7489 7631 -154 226 260 65 13 chr2 232700880 232700957 -20555626 + L1MC5 LINE L1 7833 7913 -48 1394 172 111 0 chr2 232701159 232701438 -20555145 + AluJo SINE Alu 1 310 -2 659 192 6 0 chr2 232701446 232701613 -20554970 + GA-rich Low_complexity Low_complexity 3 170 0 1559 186 3 29 chr2 232701619 232701925 -20554658 + AluJo SINE Alu 9 306 -6 2614 135 36 17 chr2 232703377 232703792 -20552791 + Tigger2a DNA MER2_type 11 433 -1 1868 173 0 0 chr2 232703862 232704146 -20552437 + AluSx SINE Alu 10 293 -19 4264 218 22 48 chr2 232704216 232704231 -20552352 - L1MB2 LINE L1 -3 6168 6154 288 0 0 0 chr2 232704231 232704263 -20552320 + (TG)n Simple_repeat Simple_repeat 1 32 0 4264 218 22 48 chr2 232704263 232704446 -20552137 - L1MB2 LINE L1 -17 6154 5968 241 65 0 0 chr2 232704446 232704477 -20552106 - MADE1 DNA Mariner -14 66 36 4264 218 22 48 chr2 232704477 232705632 -20550951 - L1MB2 LINE L1 -203 5968 4829 2316 114 0 0 chr2 232705632 232705939 -20550644 - AluSx SINE Alu -5 307 1 4264 218 22 48 chr2 232705939 232706180 -20550403 - L1MB2 LINE L1 -1342 4829 4583 246 203 156 62 chr2 232706604 232706732 -20549851 - MER103 DNA DNA -10 156 17 432 180 45 18 chr2 232707136 232707247 -20549336 - MER69 DNA AcHobo -276 2250 2137 2085 198 86 24 chr2 232707532 232708130 -20548453 - MER69 DNA AcHobo 0 2526 1890 1024 288 196 3 chr2 232708132 232708504 -20548079 - MER69 DNA AcHobo -2082 444 1 16177 181 27 6 chr2 232708669 232708768 -20547815 + L1M2 LINE L1 1 96 -6752 744 22 0 0 chr2 232708768 232708858 -20547725 + (GA)n Simple_repeat Simple_repeat 1 90 0 16177 181 27 6 chr2 232708858 232711653 -20544930 + L1M2 LINE L1 96 2958 -3890 1086 138 0 12 chr2 232712014 232712181 -20544402 + FRAM SINE Alu 1 164 -12 297 227 76 3 chr2 232712271 232712365 -20544218 - MIR SINE MIR -33 175 75 197 197 16 0 chr2 232715013 232715074 -20541509 + (TA)n Simple_repeat Simple_repeat 1 62 0 562 159 28 0 chr2 232715270 232715377 -20541206 - MER65A LTR ERV1 0 445 336 458 148 119 30 chr2 232715342 232715443 -20541140 + MER65A LTR ERV1 336 445 0 * 3048 113 11 13 chr2 232715464 232715923 -20540660 + L1MA3 LINE L1 5848 6305 0 198 174 0 0 chr2 232716145 232716191 -20540392 + (TTCA)n Simple_repeat Simple_repeat 4 49 0 2306 75 19 34 chr2 232717127 232717449 -20539134 - L1PA13 LINE L1 -2 6161 5845 2479 112 2 57 chr2 232718194 232718370 -20538213 + Tigger2a DNA MER2_type 1 185 -2523 2754 101 20 6 chr2 232718370 232718727 -20537856 - THE1B LTR MaLR -2 362 1 2479 112 2 57 chr2 232718727 232718951 -20537632 + Tigger2a DNA MER2_type 185 379 -55 403 287 68 98 chr2 232719470 232719705 -20536878 - L1ME4a LINE L1 -98 6023 5783 2245 101 0 0 chr2 232719705 232719992 -20536591 + AluSq SINE Alu 1 287 -26 207 0 0 0 chr2 232719999 232720022 -20536561 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 403 287 68 98 chr2 232720022 232720514 -20536069 - L1ME4a LINE L1 -344 5777 5310 28 0 0 0 chr2 232720862 232720890 -20535693 + AT_rich Low_complexity Low_complexity 1 28 0 1712 173 7 10 chr2 232720891 232721192 -20535391 + AluJb SINE Alu 1 300 -12 364 294 105 78 chr2 232721646 232721956 -20534627 - L1ME4a LINE L1 -1741 4405 4072 2107 137 0 0 chr2 232721956 232722256 -20534327 - AluSx SINE Alu -12 300 1 364 294 105 78 chr2 232722256 232722507 -20534076 - L1ME4a LINE L1 -2074 4072 3829 953 180 6 45 chr2 232722937 232723115 -20533468 - FAM SINE Alu -4 171 1 21 0 0 0 chr2 232724131 232724152 -20532431 + AT_rich Low_complexity Low_complexity 1 21 0 2222 127 13 0 chr2 232725112 232725420 -20531163 + AluSx SINE Alu 1 312 0 230 37 37 56 chr2 232725581 232725635 -20530948 + (TTTTTG)n Simple_repeat Simple_repeat 3 55 0 514 291 70 28 chr2 232726310 232726595 -20529988 - L1MC4 LINE L1 -472 7570 7274 519 261 24 24 chr2 232726647 232726664 -20529919 - L1MA10 LINE L1 0 6334 6318 1456 232 38 20 chr2 232726664 232727061 -20529522 - L1ME2 LINE L1 -9 6224 5821 * 3338 224 90 20 chr2 232727055 232728317 -20528266 - L1ME2 LINE L1 -1237 4978 3541 1725 257 35 13 chr2 232728306 232728762 -20527821 - L1ME2 LINE L1 -5896 500 35 * 23 0 0 0 chr2 232728839 232728862 -20527721 + AT_rich Low_complexity Low_complexity 1 23 0 775 275 80 4 chr2 232729057 232729333 -20527250 - L1MC4 LINE L1 -974 7068 6772 21 57 0 0 chr2 232729505 232729540 -20527043 + AT_rich Low_complexity Low_complexity 1 35 0 341 249 65 108 chr2 232729621 232729806 -20526777 + MER5B DNA MER1_type 1 177 -1 2164 158 30 19 chr2 232730511 232730872 -20525711 - MLT1A1 LTR MaLR 0 365 1 626 282 83 62 chr2 232730881 232730987 -20525596 - L1MC4 LINE L1 0 8042 7940 2547 127 21 10 chr2 232730987 232731373 -20525210 - MLT1B LTR MaLR 0 390 1 626 282 83 62 chr2 232731373 232731859 -20524724 - L1MC4 LINE L1 -102 7940 7336 355 215 32 21 chr2 232731886 232731979 -20524604 + MLT1H LTR MaLR 81 174 -375 268 309 11 0 chr2 232732163 232732257 -20524326 + MLT1H LTR MaLR 455 549 0 377 246 102 60 chr2 232733702 232733869 -20522714 - L1MC5 LINE L1 -54 7907 7734 896 212 26 35 chr2 232733879 232734223 -20522360 + MSTD LTR MaLR 1 396 0 242 259 42 72 chr2 232734224 232734556 -20522027 - L1MC5 LINE L1 -241 7720 7399 982 157 5 16 chr2 232734986 232735177 -20521406 - MER53 DNA DNA 0 189 1 804 230 207 61 chr2 232736306 232736784 -20519799 + MLT1H LTR MaLR 2 549 0 28 0 0 0 chr2 232738960 232738988 -20517595 + AT_rich Low_complexity Low_complexity 1 28 0 2465 130 14 0 chr2 232739171 232739541 -20517042 + THE1C LTR MaLR 1 375 0 26 50 0 0 chr2 232740026 232740066 -20516517 + AT_rich Low_complexity Low_complexity 1 40 0 2130 104 24 0 chr2 232740080 232740368 -20516215 + AluSq SINE Alu 5 299 -14 748 274 5 5 chr2 232740812 232741024 -20515559 - MLT1-int LTR MaLR -484 887 676 294 336 67 0 chr2 232741167 232741286 -20515297 + L2 LINE L2 2859 2985 -328 265 299 13 0 chr2 232741288 232741365 -20515218 + MER81 DNA DNA 30 107 -7 429 291 43 0 chr2 232741373 232741490 -20515093 + L2 LINE L2 3192 3313 0 29 0 0 0 chr2 232741750 232741779 -20514804 + AT_rich Low_complexity Low_complexity 1 29 0 288 314 27 11 chr2 232742044 232742232 -20514351 + L1MCc LINE L1 7 197 -6226 2001 77 0 18 chr2 232742257 232742531 -20514052 - L1PA6 LINE L1 0 6154 5886 15176 127 12 22 chr2 232742531 232745148 -20511435 - L1P LINE L1 -3553 2593 3 260 274 27 96 chr2 232745165 232745384 -20511199 + L1MCc LINE L1 255 458 -5965 2747 126 21 9 chr2 232745590 232746012 -20510571 - MSTA LTR MaLR 0 428 2 216 0 0 0 chr2 232746117 232746141 -20510442 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 1035 278 85 30 chr2 232746305 232747226 -20509357 + L1MCc LINE L1 1129 2306 -4816 1006 191 16 0 chr2 232747658 232747852 -20508731 - MER20 DNA MER1_type -1 218 22 13841 162 32 29 chr2 232747887 232750620 -20505963 + L1MA2 LINE L1 13 2735 -4830 6999 58 16 3 chr2 232750620 232751723 -20504860 - L1PA7 LINE L1 -7 6147 5036 13841 162 32 29 chr2 232751723 232753101 -20503482 + L1MA2 LINE L1 2735 4107 -3458 2214 64 40 34 chr2 232753101 232753397 -20503186 - AluY SINE Alu -13 298 1 13841 162 32 29 chr2 232753397 232755326 -20501257 + L1MA2 LINE L1 4107 6428 -1137 3415 115 53 2 chr2 232755330 232756034 -20500549 + L1MA2 LINE L1 6515 7251 -473 1418 42 73 0 chr2 232756031 232756222 -20500361 + L1P3 LINE L1 5404 5608 -546 * 2646 114 13 50 chr2 232756223 232756698 -20499885 + L1MA2 LINE L1 7267 7723 0 260 328 0 21 chr2 232756987 232757122 -20499461 + GA-rich Low_complexity Low_complexity 1 132 0 468 299 93 62 chr2 232757249 232757667 -20498916 + L1ME LINE L1 4950 5380 -766 472 303 70 27 chr2 232757673 232758003 -20498580 + L1ME LINE L1 5406 5749 -372 26 0 0 0 chr2 232758178 232758204 -20498379 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr2 232758753 232758774 -20497809 + AT_rich Low_complexity Low_complexity 1 21 0 348 324 102 25 chr2 232759348 232759592 -20496991 + MLT1L LTR MaLR 3 265 -350 296 179 119 0 chr2 232759732 232759799 -20496784 - AluJo SINE Alu -133 169 95 1238 219 68 38 chr2 232759799 232760165 -20496418 - MLT1E3 LTR MaLR -247 377 1 183 270 27 0 chr2 232760368 232760405 -20496178 - MER5A DNA MER1_type -86 103 66 2166 59 0 0 chr2 232760405 232760661 -20495922 - AluY SINE Alu -19 292 37 217 175 0 0 chr2 232760846 232760886 -20495697 + L2 LINE L2 3267 3306 -7 2238 121 0 3 chr2 232760994 232761299 -20495284 + AluSx SINE Alu 2 305 -7 1848 207 9 12 chr2 232761437 232761862 -20494721 - L1MB7 LINE L1 0 6184 5761 303 206 42 19 chr2 232761954 232762066 -20494517 - MLT1J LTR MaLR -328 287 110 1688 199 3 3 chr2 232762343 232762654 -20493929 - AluJo SINE Alu -1 311 1 696 239 5 10 chr2 232762658 232762855 -20493728 + L1MC5 LINE L1 7704 7899 -62 460 286 37 66 chr2 232763378 232763543 -20493040 - MLT1J LTR MaLR -6 505 350 1939 168 8 35 chr2 232763543 232763917 -20492666 - MLT1A1 LTR MaLR -1 364 1 460 286 37 66 chr2 232763917 232764024 -20492559 - MLT1J LTR MaLR -161 350 241 229 277 58 32 chr2 232764032 232764187 -20492396 - MLT1J LTR MaLR -340 171 13 2249 134 35 0 chr2 232764415 232764788 -20491795 + Tigger2 DNA MER2_type 2333 2718 0 584 90 0 11 chr2 232764966 232765055 -20491528 + (TTCC)n Simple_repeat Simple_repeat 2 89 0 1886 186 165 0 chr2 232765127 232765557 -20491026 + MLT1D LTR MaLR 5 505 0 354 173 42 42 chr2 232765832 232766000 -20490583 + (TTATA)n Simple_repeat Simple_repeat 4 171 0 232 221 23 12 chr2 232766007 232766093 -20490490 + L1MC4 LINE L1 6615 6701 -1341 527 127 0 34 chr2 232766094 232766212 -20490371 + (TA)n Simple_repeat Simple_repeat 1 114 0 33 25 0 0 chr2 232766264 232766304 -20490279 + AT_rich Low_complexity Low_complexity 1 40 0 432 101 43 43 chr2 232766404 232766473 -20490110 - FLAM_A SINE Alu -18 124 56 427 328 20 15 chr2 232766473 232766674 -20489909 - L1ME3A LINE L1 -305 5865 5664 1059 278 87 7 chr2 232766677 232767481 -20489102 - L1ME3A LINE L1 -558 5604 4733 417 353 72 17 chr2 232767486 232767786 -20488797 + L1MEc LINE L1 102 540 -5665 3781 150 45 120 chr2 232768021 232768935 -20487648 + Tigger4(Zombi) DNA MER2_type 1 845 -1886 22 70 0 0 chr2 232768983 232769026 -20487557 + AT_rich Low_complexity Low_complexity 1 43 0 307 71 18 18 chr2 232769057 232769113 -20487470 + (TTTTA)n Simple_repeat Simple_repeat 1 56 0 1694 163 4 7 chr2 232769118 232769394 -20487189 - AluJb SINE Alu -37 275 1 2378 77 115 0 chr2 232769503 232769841 -20486742 + MER51B LTR ERV1 1 377 0 2421 104 42 0 chr2 232770219 232770605 -20485978 + Tigger4(Zombi) DNA MER2_type 824 1225 -1506 * 5913 138 13 21 chr2 232770598 232771643 -20484940 + Tigger4(Zombi) DNA MER2_type 1695 2731 0 976 152 46 0 chr2 232771666 232771817 -20484766 + FRAM SINE Alu 1 158 -8 337 224 9 58 chr2 232771832 232772027 -20484556 + L1MEc LINE L1 635 940 -5265 473 284 114 61 chr2 232772282 232772698 -20483885 + L1MEc LINE L1 1012 1573 -4642 2064 119 11 3 chr2 232772698 232772984 -20483599 - AluSc SINE Alu -20 289 2 473 284 114 61 chr2 232772984 232773214 -20483369 + L1MEc LINE L1 1573 1789 -4426 698 328 94 0 chr2 232773345 232773690 -20482893 + LTR16A LTR ERVL 1 391 -59 2554 102 80 12 chr2 232773690 232774091 -20482492 + MSTA LTR MaLR 1 428 0 698 328 94 0 chr2 232774091 232774151 -20482432 + LTR16A LTR ERVL 391 444 -6 374 291 50 25 chr2 232774162 232774366 -20482217 - L1 LINE L1 -1525 4621 4411 271 295 32 21 chr2 232774560 232774655 -20481928 - MLT1K LTR MaLR -341 247 152 323 226 30 55 chr2 232775161 232775284 -20481299 - MIR SINE MIR -63 145 31 691 164 25 8 chr2 232776063 232776185 -20480398 + FLAM_A SINE Alu 1 124 -9 25 0 0 0 chr2 232776418 232776443 -20480140 + AT_rich Low_complexity Low_complexity 1 25 0 2028 104 3 67 chr2 232776444 232776760 -20479823 - AluY SINE Alu -15 296 1 534 247 31 43 chr2 232776804 232776966 -20479617 - MIR SINE MIR -8 254 95 195 367 58 58 chr2 232777472 232777818 -20478765 - L2 LINE L2 -21 3251 2906 291 178 0 0 chr2 232778023 232778068 -20478515 - MIR3 SINE MIR -21 187 143 2305 147 30 35 chr2 232778089 232778524 -20478059 + Tigger2a DNA MER2_type 1 433 -1 2040 133 60 28 chr2 232779013 232779366 -20477217 - THE1B LTR MaLR 0 364 1 1535 200 35 136 chr2 232779778 232779852 -20476731 + MLT2B1 LTR ERVL 1 81 -439 840 186 0 58 chr2 232779852 232780024 -20476559 + FAM SINE Alu 1 162 -13 1535 200 35 136 chr2 232780024 232780072 -20476511 + MLT2B1 LTR ERVL 81 132 -388 279 0 0 0 chr2 232780072 232780103 -20476480 + (TG)n Simple_repeat Simple_repeat 2 32 0 1535 200 35 136 chr2 232780103 232780558 -20476025 + MLT2B1 LTR ERVL 132 520 0 311 64 0 0 chr2 232780998 232781045 -20475538 + HY1 scRNA scRNA 65 111 -1 706 131 0 0 chr2 232781064 232781171 -20475412 + HY1 scRNA scRNA 5 111 -1 35 24 0 0 chr2 232781171 232781213 -20475370 + AT_rich Low_complexity Low_complexity 1 42 0 256 125 0 0 chr2 232781423 232781463 -20475120 + MLT2B2 LTR ERVL 311 350 -165 223 283 148 31 chr2 232782219 232782387 -20474196 - MIR SINE MIR -62 146 4 2083 123 50 34 chr2 232782809 232783167 -20473416 + THE1B LTR MaLR 1 364 0 372 269 32 84 chr2 232783215 232783464 -20473119 - Charlie8 DNA MER1_type -1001 1416 94 779 171 44 0 chr2 232783479 232783637 -20472946 - L1MA8 LINE L1 -2 6289 6125 828 61 0 0 chr2 232783637 232783735 -20472848 - AluSg/x SINE Alu -17 292 195 2934 126 38 22 chr2 232783751 232784299 -20472284 - L1MA8 LINE L1 -195 6096 5540 244 227 45 15 chr2 232784299 232784365 -20472218 - Charlie8 DNA MER1_type -2303 114 47 27 62 0 0 chr2 232785569 232785617 -20470966 + AT_rich Low_complexity Low_complexity 1 48 0 1180 157 47 21 chr2 232785748 232785983 -20470600 - L1PA15 LINE L1 0 6165 5925 682 169 39 15 chr2 232785990 232786120 -20470463 - FLAM_A SINE Alu 0 133 1 337 176 71 0 chr2 232786124 232786209 -20470374 - L1MA8 LINE L1 -944 5202 5112 300 286 75 27 chr2 232787374 232787521 -20469062 + MIR SINE MIR 32 185 -77 181 213 0 64 chr2 232787586 232787633 -20468950 + L2 LINE L2 3004 3047 -266 271 308 51 18 chr2 232788097 232788219 -20468364 + MIR SINE MIR 74 198 -54 538 261 28 57 chr2 232788367 232788543 -20468040 + MIR SINE MIR 3 176 -32 5002 41 0 0 chr2 232788543 232789344 -20467239 - L1PA5 LINE L1 -270 5884 5084 1100 199 11 23 chr2 232789344 232789610 -20466973 + MER83B-int LTR ERV1 4059 4321 -559 3729 103 72 19 chr2 232789614 232790291 -20466292 + MER83B-int LTR ERV1 3881 4593 -2005 442 318 61 36 chr2 232841077 232841351 -20415232 - LTR33A LTR ERVL -239 284 32 2343 104 0 0 chr2 232841701 232841999 -20414584 - AluSx SINE Alu -14 298 1 412 235 0 24 chr2 232842765 232842935 -20413648 + (TATG)n Simple_repeat Simple_repeat 4 169 0 312 91 0 0 chr2 232843498 232843542 -20413041 + (GGGA)n Simple_repeat Simple_repeat 3 46 0 291 203 0 0 chr2 232843547 232843621 -20412962 + (TG)n Simple_repeat Simple_repeat 2 75 0 570 248 166 0 chr2 232844586 232844731 -20411852 + MER5A DNA MER1_type 21 189 0 1788 163 108 0 chr2 232845999 232846324 -20410259 - MER46B DNA MER2_type -1 235 1 239 310 62 103 chr2 232846376 232846521 -20410062 + L2 LINE L2 3117 3255 -17 2305 90 7 3 chr2 232846721 232847020 -20409563 - AluSg SINE Alu -10 300 1 2006 111 44 0 chr2 232847498 232847803 -20408780 - AluSx SINE Alu 0 319 3 2564 276 57 20 chr2 232847824 232848680 -20407903 - L1ME3A LINE L1 0 6170 5283 939 192 123 5 chr2 232848707 232848910 -20407673 - AluJo SINE Alu -1 311 85 546 260 78 15 chr2 232848913 232849218 -20407365 - L1ME3A LINE L1 -924 5222 4883 2099 156 6 0 chr2 232849263 232849584 -20406999 - MER44D DNA MER2_type 0 609 17 1176 232 101 5 chr2 232849594 232849969 -20406614 - L1ME3A LINE L1 -1331 4815 4405 770 254 68 32 chr2 232849970 232850190 -20406393 - MIR SINE MIR -34 228 1 284 274 139 45 chr2 232850196 232850309 -20406274 + L1ME4a LINE L1 5692 5793 -328 2066 178 15 0 chr2 232850309 232850646 -20405937 + MER2 DNA MER2_type 2 343 -1 284 274 139 45 chr2 232850646 232850755 -20405828 + L1ME4a LINE L1 5793 5935 -186 267 173 0 0 chr2 232850995 232851047 -20405536 + (TG)n Simple_repeat Simple_repeat 2 53 0 821 192 40 0 chr2 232852327 232852478 -20404105 - AluJo SINE Alu -36 276 120 193 323 143 12 chr2 232852566 232852727 -20403856 - MIR SINE MIR -1 261 80 3223 102 129 19 chr2 232852777 232853248 -20403335 - MER1A DNA MER1_type 0 527 5 615 203 188 0 chr2 232854756 232854884 -20401699 + AluJo SINE Alu 2 153 -159 266 182 91 65 chr2 232854885 232854962 -20401621 + FLAM SINE Alu 55 133 0 1762 185 3 3 chr2 232855886 232856189 -20400394 - AluJb SINE Alu -9 303 1 201 267 191 62 chr2 232857176 232857401 -20399182 + L2 LINE L2 2888 3141 -172 788 180 0 8 chr2 232857418 232857546 -20399037 + FLAM_C SINE Alu 1 127 -16 2462 82 0 0 chr2 232857661 232857965 -20398618 - AluY SINE Alu -7 304 1 296 221 228 54 chr2 232858540 232858689 -20397894 + MER5A DNA MER1_type 9 183 -6 416 355 16 11 chr2 232858813 232858996 -20397587 - MIR SINE MIR -70 192 9 306 0 0 0 chr2 232859358 232859392 -20397191 + (A)n Simple_repeat Simple_repeat 1 34 0 725 160 133 140 chr2 232859713 232860120 -20396463 - LTR37B LTR ERV1 -64 404 1 2225 107 10 10 chr2 232861695 232862004 -20394579 - AluSg SINE Alu -1 309 1 449 264 139 10 chr2 232862186 232862394 -20394189 - L1ME4a LINE L1 -4 6117 5883 337 224 0 0 chr2 232862730 232862797 -20393786 - L1ME4a LINE L1 -450 5671 5605 4017 86 4 0 chr2 232863729 232864267 -20392316 - L1PB1 LINE L1 -186 5965 5426 1240 123 5 41 chr2 232864267 232864406 -20392177 + L1PB1 LINE L1 5961 6095 -56 2324 100 3 0 chr2 232864406 232864706 -20391877 + AluSp SINE Alu 1 301 -12 1240 123 5 41 chr2 232864706 232864759 -20391824 + L1PB1 LINE L1 6095 6148 -3 186 329 123 34 chr2 232864812 232864958 -20391625 - L2 LINE L2 -23 3249 3091 264 400 19 6 chr2 232865136 232865296 -20391287 - L2 LINE L2 -366 2948 2787 341 279 115 0 chr2 232865341 232865445 -20391138 + MER5A DNA MER1_type 69 184 -5 1311 279 100 7 chr2 232866078 232866498 -20390085 - L1MC4a LINE L1 -1888 5920 5462 25 31 0 0 chr2 232866670 232866702 -20389881 + AT_rich Low_complexity Low_complexity 1 32 0 1849 202 93 13 chr2 232866730 232867181 -20389402 - L1MD2 LINE L1 -227 6132 5646 308 199 59 66 chr2 232867157 232867293 -20389290 - L1MC4a LINE L1 -2378 5430 5296 * 381 320 39 19 chr2 232867669 232867825 -20388758 - MLT1K LTR MaLR -280 308 150 374 263 11 23 chr2 232868257 232868432 -20388151 + CT-rich Low_complexity Low_complexity 1 173 0 735 164 0 0 chr2 232868512 232868683 -20387900 + G-rich Low_complexity Low_complexity 1 171 0 414 286 156 15 chr2 232868984 232869183 -20387400 + MIR SINE MIR 15 241 -21 809 223 35 10 chr2 232869472 232869674 -20386909 + L3b LINE CR1 1246 1452 -131 483 252 156 66 chr2 232869943 232870059 -20386524 - MER102b DNA MER1_type -1099 329 225 1680 91 0 0 chr2 232870059 232870269 -20386314 - AluY SINE Alu -13 298 89 483 252 156 66 chr2 232870269 232870454 -20386129 - MER102b DNA MER1_type -1203 225 1 398 197 0 0 chr2 232870587 232870663 -20385920 - MER116 DNA Mariner -4 76 1 374 291 39 0 chr2 232872457 232872560 -20384023 - MIR SINE MIR 0 262 156 336 180 16 0 chr2 232872560 232872621 -20383962 + Tigger2 DNA MER2_type 1 62 -2656 2533 128 27 3 chr2 232874085 232874461 -20382122 + Tigger2 DNA MER2_type 2334 2718 0 481 223 0 0 chr2 232874470 232874564 -20382019 - MIR SINE MIR -122 140 47 190 163 70 23 chr2 232875265 232875308 -20381275 + MIR3 SINE MIR 115 159 -49 339 267 27 0 chr2 232875352 232875427 -20381156 + MER5B DNA MER1_type 69 145 -33 530 258 113 76 chr2 232875505 232875676 -20380907 - L2 LINE L2 -5 3308 3145 819 141 0 92 chr2 232875676 232875818 -20380765 + FLAM_A SINE Alu 1 129 -4 530 258 113 76 chr2 232875818 232876245 -20380338 - L2 LINE L2 -168 3145 2677 1293 177 25 82 chr2 232876478 232876795 -20379788 + AluJo SINE Alu 1 299 -13 470 132 0 0 chr2 232876795 232876863 -20379720 - L1MB7 LINE L1 -62 6122 6055 775 173 155 6 chr2 232877003 232877171 -20379412 + MER3 DNA MER1_type 17 209 0 22 0 0 0 chr2 232877838 232877860 -20378723 + AT_rich Low_complexity Low_complexity 1 22 0 590 292 41 1 chr2 232878156 232878386 -20378197 - MER115 DNA AcHobo 0 4031 453 425 309 20 13 chr2 232878432 232878581 -20378002 - MER115 DNA AcHobo -360 333 184 1687 182 6 19 chr2 232878741 232879054 -20377529 - AluJb SINE Alu -3 309 1 875 135 105 48 chr2 232879323 232879552 -20377031 - L1MB8 LINE L1 0 6178 5937 204 189 0 0 chr2 232879678 232879715 -20376868 - MER5A DNA MER1_type -1 188 152 2340 83 0 7 chr2 232880282 232880582 -20376001 - AluSg1 SINE Alu -11 298 1 4051 68 13 22 chr2 232880854 232881394 -20375189 + L1PA8 LINE L1 5637 6171 -1 194 266 0 47 chr2 232881531 232881595 -20374988 - L3b LINE CR1 -234 1349 1289 188 324 44 0 chr2 232882674 232882742 -20373841 + L2 LINE L2 3243 3313 0 1777 177 80 54 chr2 232883276 232883340 -20373243 - MLT1D LTR MaLR 0 505 444 823 259 97 96 chr2 232883340 232883876 -20372707 - LTR8 LTR ERV1 0 691 152 1800 135 4 0 chr2 232883876 232884143 -20372440 + AluSx SINE Alu 44 311 -1 823 259 97 96 chr2 232884143 232884296 -20372287 - LTR8 LTR ERV1 -539 152 1 1777 177 80 54 chr2 232884296 232884618 -20371965 - MLT1D LTR MaLR -61 444 119 1556 146 68 7 chr2 232884618 232884743 -20371840 + L1MA4 LINE L1 5982 6098 -202 2451 81 3 0 chr2 232884743 232885041 -20371542 + AluSp SINE Alu 1 299 -14 1556 146 68 7 chr2 232885041 232885210 -20371373 + L1MA4 LINE L1 6098 6294 -6 1777 177 80 54 chr2 232885210 232885333 -20371250 - MLT1D LTR MaLR -386 119 1 455 247 10 32 chr2 232886040 232886223 -20370360 - LTR8A LTR ERV1 -439 252 132 232 94 0 0 chr2 232886223 232886255 -20370328 + Alu SINE Alu 44 75 -227 962 120 8 0 chr2 232886256 232886389 -20370194 - AluSg/x SINE Alu -98 214 81 206 283 230 0 chr2 232886912 232887025 -20369558 + MIR SINE MIR 46 184 -78 197 271 14 29 chr2 232887268 232887338 -20369245 + MIR3 SINE MIR 92 160 -48 519 218 11 22 chr2 232887813 232887992 -20368591 + (TATG)n Simple_repeat Simple_repeat 4 180 0 595 214 6 6 chr2 232888042 232888220 -20368363 + (TATG)n Simple_repeat Simple_repeat 1 178 0 578 223 0 22 chr2 232888214 232888398 -20368185 + (TATATG)n Simple_repeat Simple_repeat 1 180 0 * 305 234 0 19 chr2 232888418 232888525 -20368058 + (TATATG)n Simple_repeat Simple_repeat 4 108 0 501 285 0 0 chr2 232888611 232888790 -20367793 + C-rich Low_complexity Low_complexity 1 179 0 359 275 18 30 chr2 232888810 232888977 -20367606 + C-rich Low_complexity Low_complexity 1 165 0 285 208 0 0 chr2 232889173 232889226 -20367357 + MER5B DNA MER1_type 2 54 -124 2421 182 33 19 chr2 232889237 232889339 -20367244 + L1MB3 LINE L1 5679 5778 -405 13310 135 45 55 chr2 232889339 232889681 -20366902 - Tigger1 DNA MER2_type 0 2418 2074 1814 172 10 0 chr2 232889681 232889978 -20366605 - AluJo SINE Alu -8 304 5 13310 135 45 55 chr2 232889978 232890394 -20366189 - Tigger1 DNA MER2_type -344 2074 1655 2228 118 0 7 chr2 232890394 232890700 -20365883 - AluSx SINE Alu -8 304 1 13310 135 45 55 chr2 232890700 232892383 -20364200 - Tigger1 DNA MER2_type -763 1655 1 2421 182 33 19 chr2 232892383 232892759 -20363824 + L1MB3 LINE L1 5778 6164 -19 380 241 0 0 chr2 232892782 232892861 -20363722 + MER5B DNA MER1_type 100 178 0 2461 92 0 3 chr2 232893056 232893370 -20363213 + AluSp SINE Alu 1 313 0 359 316 74 30 chr2 232893864 232894095 -20362488 + MLT1L LTR MaLR 366 606 -9 379 258 52 61 chr2 232894597 232894810 -20361773 - MLT1K LTR MaLR 0 588 378 2352 92 0 3 chr2 232896164 232896458 -20360125 + AluSx SINE Alu 5 297 -15 2114 107 4 0 chr2 232897464 232897782 -20358801 + AluSx SINE Alu 1 319 0 508 274 120 62 chr2 232898469 232898937 -20357646 + L1ME4a LINE L1 5331 5825 -296 1355 237 81 14 chr2 232898951 232899373 -20357210 + L1ME1 LINE L1 5699 6148 -18 189 147 0 0 chr2 232899400 232899434 -20357149 + (GA)n Simple_repeat Simple_repeat 1 34 0 2435 101 67 6 chr2 232899675 232900033 -20356550 - MSTA LTR MaLR -48 380 1 2148 115 27 15 chr2 232900033 232900363 -20356220 - MSTA-int LTR MaLR 0 1651 1318 297 165 52 62 chr2 232900434 232900531 -20356052 - LTR33A LTR ERVL -23 500 405 557 243 68 12 chr2 232900818 232900983 -20355600 - MIR SINE MIR -55 207 27 194 321 0 0 chr2 232901053 232901106 -20355477 - MIR SINE MIR -67 141 89 2554 59 0 3 chr2 232901202 232901508 -20355075 - AluY SINE Alu -6 305 1 1029 47 78 0 chr2 232901528 232901657 -20354926 - MER85 DNA T2_type 0 139 1 3375 81 61 26 chr2 232902574 232903069 -20353514 + L1PA11 LINE L1 5661 6172 -2 247 259 95 20 chr2 232903069 232903216 -20353367 - L1MC/D LINE L1 -2358 5450 5293 186 43 0 0 chr2 232904198 232904221 -20352362 + (ATTG)n Simple_repeat Simple_repeat 1 23 0 1470 181 71 0 chr2 232904221 232904475 -20352108 - AluJo SINE Alu -30 282 11 427 294 21 21 chr2 232906833 232906976 -20349607 - MIR SINE MIR -118 144 2 225 132 0 0 chr2 232908153 232908191 -20348392 + (TTA)n Simple_repeat Simple_repeat 2 39 0 337 255 121 47 chr2 232908462 232908611 -20347972 - MIR SINE MIR -100 162 3 42 0 0 0 chr2 232908713 232908755 -20347828 + AT_rich Low_complexity Low_complexity 1 42 0 317 292 101 8 chr2 232909162 232909291 -20347292 + MIR3 SINE MIR 56 198 -10 1918 147 22 169 chr2 232909376 232909913 -20346670 - LTR32 LTR ERVL 0 471 14 2161 166 18 18 chr2 232910043 232910380 -20346203 + MER1B DNA MER1_type 1 337 0 204 40 0 0 chr2 232910551 232910576 -20346007 + (TG)n Simple_repeat Simple_repeat 2 26 0 2379 103 3 0 chr2 232911490 232911802 -20344781 + AluSp SINE Alu 1 313 0 1578 183 0 59 chr2 232912227 232912550 -20344033 - AluJo SINE Alu -7 305 2 1043 187 0 0 chr2 232912950 232913105 -20343478 - FRAM SINE Alu -11 155 1 1832 163 53 20 chr2 232913134 232913490 -20343093 - THE1C LTR MaLR -7 368 1 9262 126 85 8 chr2 232913490 232914957 -20341626 - THE1C-int LTR MaLR 0 1580 1 2059 166 29 27 chr2 232914957 232915331 -20341252 - THE1C LTR MaLR 0 375 1 646 196 0 0 chr2 232915334 232915441 -20341142 - FLAM_C SINE Alu -35 108 2 2169 164 119 23 chr2 232915612 232916050 -20340533 + LTR54 LTR ERV1 1 480 -30 293 98 0 0 chr2 232916097 232916138 -20340445 + LTR54 LTR ERV1 470 510 0 947 93 0 0 chr2 232916736 232916865 -20339718 + AluSg/x SINE Alu 179 307 -3 1896 163 0 7 chr2 232916938 232917244 -20339339 + AluJo SINE Alu 1 304 -8 1717 208 27 26 chr2 232917356 232917953 -20338630 + MER92B LTR ERV1 7 636 0 2038 123 26 7 chr2 232919051 232919353 -20337230 - AluSx SINE Alu -3 309 2 446 299 151 74 chr2 232919414 232919819 -20336764 - L2 LINE L2 -1 3312 2877 267 239 80 11 chr2 232919831 232919919 -20336664 + L2 LINE L2 1998 2091 -1223 354 324 110 0 chr2 232919940 232920085 -20336498 + MIR3 SINE MIR 43 203 -5 694 139 0 19 chr2 232920100 232920208 -20336375 + U6 snRNA snRNA 2 107 0 243 0 0 0 chr2 232920308 232920335 -20336248 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 207 0 0 0 chr2 232920366 232920389 -20336194 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 313 259 195 28 chr2 232920400 232920651 -20335932 - L2 LINE L2 -12 3301 3009 1127 188 52 26 chr2 232924187 232924416 -20332167 - MER46A DNA MER2_type 0 236 2 21 0 0 0 chr2 232925106 232925127 -20331456 + AT_rich Low_complexity Low_complexity 1 21 0 3964 159 22 37 chr2 232927199 232927463 -20329120 + Tigger2 DNA MER2_type 1 267 -2451 1956 162 0 3 chr2 232927463 232927766 -20328817 + AluJb SINE Alu 1 302 -10 3964 159 22 37 chr2 232927766 232928256 -20328327 + Tigger2 DNA MER2_type 267 744 -1974 1423 179 20 0 chr2 232928313 232928564 -20328019 + Tigger2 DNA MER2_type 2463 2718 0 30 27 0 0 chr2 232928682 232928719 -20327864 + AT_rich Low_complexity Low_complexity 1 37 0 334 262 35 71 chr2 232930157 232930298 -20326285 + MIR3 SINE MIR 32 167 -41 223 276 92 26 chr2 232930341 232930417 -20326166 - MIR3 SINE MIR -45 163 83 980 141 0 0 chr2 232931039 232931181 -20325402 + L1MA4 LINE L1 6157 6298 -2 2265 167 111 30 chr2 232931567 232932071 -20324512 - L1MB7 LINE L1 -19 6165 5621 1871 129 35 3 chr2 232933503 232933789 -20322794 - AluJb SINE Alu -17 295 1 2316 65 11 0 chr2 232933816 232934119 -20322464 - AluY SINE Alu 0 309 4 5793 143 14 8 chr2 232934122 232935053 -20321530 - L1MC1 LINE L1 -8 6325 5389 256 371 0 0 chr2 232935201 232935298 -20321285 + L2 LINE L2 3161 3257 -15 1122 247 47 44 chr2 232935300 232935700 -20320883 + MLT1D LTR MaLR 1 531 -110 641 182 0 0 chr2 232935709 232935819 -20320764 - L1MB7 LINE L1 -209 5975 5866 552 231 166 74 chr2 232935823 232936160 -20320423 - MER20B DNA MER1_type -30 753 386 24 32 0 0 chr2 232936160 232936191 -20320392 + AT_rich Low_complexity Low_complexity 1 31 0 789 131 0 0 chr2 232936191 232936298 -20320285 - FLAM_C SINE Alu -25 118 12 1292 255 3 10 chr2 232936316 232936614 -20319969 - MER20B DNA MER1_type -394 389 94 1441 201 46 147 chr2 232936728 232936823 -20319760 - L1MB8 LINE L1 -28 6150 6047 2120 118 0 30 chr2 232936823 232937127 -20319456 + AluSx SINE Alu 1 295 -17 1441 201 46 147 chr2 232937127 232937144 -20319439 - L1MB8 LINE L1 -131 6047 5735 2014 194 72 61 chr2 232937144 232937820 -20318763 - L1ME1 LINE L1 -67 6099 5468 24 32 0 0 chr2 232937852 232937883 -20318700 + AT_rich Low_complexity Low_complexity 1 31 0 500 262 16 0 chr2 232937903 232938029 -20318554 - MIR SINE MIR -16 246 119 4069 150 143 19 chr2 232938201 232938936 -20317647 + LTR1B LTR ERV1 1 826 0 387 333 145 6 chr2 232940278 232940437 -20316146 - MER5A DNA MER1_type 0 189 9 4794 106 26 15 chr2 232940633 232941413 -20315170 - L1PA16 LINE L1 -11 6155 5333 1939 135 30 3 chr2 232941515 232941812 -20314771 + AluSx SINE Alu 1 305 -7 1756 165 0 20 chr2 232941829 232942126 -20314457 - AluJb SINE Alu -21 291 1 626 274 162 5 chr2 232942363 232942567 -20314016 + MIR SINE MIR 3 238 -24 184 240 120 20 chr2 232942533 232942583 -20314000 + L2 LINE L2 3251 3305 -8 * 405 286 23 23 chr2 232943175 232943308 -20313275 + MER94 DNA DNA 1 133 -1 1506 178 28 28 chr2 232943734 232944049 -20312534 - AluJo SINE Alu 0 315 1 214 155 0 28 chr2 232944749 232944820 -20311763 + (TTTA)n Simple_repeat Simple_repeat 4 72 0 434 277 18 27 chr2 232945016 232945128 -20311455 + MIR SINE MIR 20 130 -78 450 186 124 0 chr2 232945213 232945310 -20311273 + MIR SINE MIR 122 230 -32 530 217 106 19 chr2 232947150 232947311 -20309272 + MER96B DNA MER1_type? 4 178 -239 2959 70 19 5 chr2 232947696 232948067 -20308516 + L1PA8A LINE L1 5754 6129 -2 898 169 18 12 chr2 232948274 232948440 -20308143 + Tigger1 DNA MER2_type 2252 2418 0 535 178 50 0 chr2 232948441 232948542 -20308041 - L1M3 LINE L1 -387 5784 5679 267 226 0 0 chr2 232948553 232948606 -20307977 - MER5B DNA MER1_type -124 54 2 215 105 0 105 chr2 232949015 232949196 -20307387 + (CCCCCT)n Simple_repeat Simple_repeat 5 166 0 335 269 87 10 chr2 232949498 232949602 -20306981 + L2 LINE L2 3136 3247 -25 261 289 0 13 chr2 232950004 232950080 -20306503 + L1ME LINE L1 5759 5833 -288 29 0 0 0 chr2 232951447 232951476 -20305107 + GC_rich Low_complexity Low_complexity 1 29 0 1750 163 30 7 chr2 232951750 232952045 -20304538 - AluJb SINE Alu -10 302 1 2436 44 17 3 chr2 232953116 232953411 -20303172 + AluY SINE Alu 1 299 -12 236 38 19 57 chr2 232953799 232953852 -20302731 + (TA)n Simple_repeat Simple_repeat 1 51 0 2403 157 37 37 chr2 232955896 232956330 -20300253 - Tigger2a DNA MER2_type 0 434 1 482 161 0 23 chr2 232958025 232958112 -20298471 - AluJb SINE Alu -3 309 225 264 81 81 0 chr2 232958118 232958155 -20298428 - AluJb SINE Alu -138 164 125 228 182 0 0 chr2 232958155 232958199 -20298384 + (TATG)n Simple_repeat Simple_repeat 2 45 0 800 151 8 0 chr2 232958215 232958341 -20298242 - AluJb SINE Alu -179 133 7 1411 199 28 79 chr2 232959143 232959534 -20297049 - MLT1A2 LTR MaLR 0 374 4 530 251 82 6 chr2 232960130 232960301 -20296282 + L1MC4a LINE L1 5696 5879 -1929 22 0 0 0 chr2 232960570 232960592 -20295991 + AT_rich Low_complexity Low_complexity 1 22 0 243 295 85 31 chr2 232960694 232960823 -20295760 + MIR SINE MIR 71 206 -56 2213 102 0 0 chr2 232960867 232961152 -20295431 + AluSx SINE Alu 20 304 -8 1202 200 161 23 chr2 232961867 232962579 -20294004 - L1ME1 LINE L1 -88 6078 5254 1965 146 3 10 chr2 232962813 232963115 -20293468 - AluSx SINE Alu -12 300 1 432 126 0 69 chr2 232966032 232966119 -20290464 - L1PA16 LINE L1 -5 6161 6081 277 325 26 8 chr2 232966123 232966240 -20290343 - L3b LINE CR1 -113 1470 1352 1101 57 7 14 chr2 232970787 232970927 -20285656 + AluSc SINE Alu 1 139 -170 2211 119 0 10 chr2 232970927 232971239 -20285344 + AluY SINE Alu 1 309 -2 201 238 32 16 chr2 232971326 232971389 -20285194 - MIR SINE MIR -124 138 75 357 320 129 14 chr2 232971870 232972017 -20284566 - MIR3 SINE MIR -21 187 24 229 249 155 0 chr2 232972147 232972236 -20284347 - MIR SINE MIR -65 143 65 28 71 0 0 chr2 232972330 232972386 -20284197 + AT_rich Low_complexity Low_complexity 1 56 0 732 200 0 8 chr2 232972612 232972737 -20283846 + AluJo SINE Alu 6 129 -183 1859 266 70 24 chr2 232973950 232974702 -20281881 + L1MC4a LINE L1 5266 6052 -1756 2267 91 3 3 chr2 232974875 232975173 -20281410 + AluSx SINE Alu 4 301 -11 753 42 0 0 chr2 232975227 232975322 -20281261 + L1PA7 LINE L1 5878 5972 -182 * 2205 232 118 20 chr2 232975305 232975888 -20280695 + L1MC4 LINE L1 6865 7724 -318 2354 112 58 30 chr2 232975888 232976253 -20280330 + THE1C LTR MaLR 1 375 0 2205 232 118 20 chr2 232976253 232976452 -20280131 + L1MC4 LINE L1 7724 7902 -140 21 71 0 0 chr2 232976470 232976512 -20280071 + AT_rich Low_complexity Low_complexity 1 42 0 41140 67 6 7 chr2 232976608 232982756 -20273827 + L1PA5 LINE L1 11 6154 0 889 240 15 58 chr2 232982796 232983125 -20273458 + L1MC5 LINE L1 7603 7917 -44 990 181 0 39 chr2 232983265 232983470 -20273113 + AluJo SINE Alu 115 311 -1 467 193 53 9 chr2 232984312 232984426 -20272157 - MLT1J LTR MaLR 0 511 393 1208 205 55 20 chr2 232984997 232985251 -20271332 + Tigger7 DNA MER2_type 1 263 -2224 607 174 0 20 chr2 232985253 232985351 -20271232 + Tigger7 DNA MER2_type 2491 2586 -1 2437 160 161 51 chr2 232985380 232985825 -20270758 + MER106B DNA MER1_type 1 396 -663 1260 160 167 22 chr2 232985825 232985922 -20270661 + AluJb SINE Alu 1 83 -229 219 36 0 0 chr2 232985922 232985950 -20270633 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 1260 160 167 22 chr2 232985950 232986121 -20270462 + AluJb SINE Alu 83 308 -4 2437 160 161 51 chr2 232986121 232986204 -20270379 + MER106B DNA MER1_type 396 468 -591 1293 183 91 40 chr2 232986204 232986478 -20270105 + AluJb SINE Alu 1 288 -24 2437 160 161 51 chr2 232986478 232986908 -20269675 + MER106B DNA MER1_type 468 1058 -1 199 362 68 23 chr2 232989893 232990114 -20266469 + L2 LINE L2 2509 2739 -575 21 0 0 0 chr2 232991163 232991184 -20265399 + AT_rich Low_complexity Low_complexity 1 21 0 522 260 122 4 chr2 232992619 232992873 -20263710 + L1ME3A LINE L1 5544 5827 -294 359 273 45 53 chr2 232993035 232993167 -20263416 + L1ME3A LINE L1 5965 6095 -75 1612 153 47 19 chr2 232993242 232993563 -20263020 + L1MB1 LINE L1 5836 6165 -3 528 186 168 0 chr2 232993593 232993693 -20262890 + FLAM_C SINE Alu 1 123 -189 207 0 0 0 chr2 232993693 232993716 -20262867 + (TAA)n Simple_repeat Simple_repeat 2 24 0 528 186 168 0 chr2 232993716 232993728 -20262855 + FLAM_C SINE Alu 123 132 -180 296 140 18 0 chr2 232993776 232993833 -20262750 + L1ME4a LINE L1 5960 6017 -104 1653 164 17 17 chr2 232993949 232994241 -20262342 - AluJo SINE Alu -20 292 1 1054 223 82 14 chr2 232994290 232994581 -20262002 + L1ME1 LINE L1 5767 6077 -89 283 263 75 23 chr2 232994680 232994813 -20261770 + L1M4 LINE L1 4697 4836 -1310 357 210 117 64 chr2 232995025 232995276 -20261307 - L1M4 LINE L1 -1581 4565 4304 23 33 0 0 chr2 232995276 232995306 -20261277 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 232995689 232995710 -20260873 + AT_rich Low_complexity Low_complexity 1 21 0 449 240 78 8 chr2 232995808 232995937 -20260646 - MIR SINE MIR -61 201 64 212 87 67 29 chr2 232995948 232996052 -20260531 + (TTATA)n Simple_repeat Simple_repeat 4 111 0 2458 67 0 7 chr2 232996233 232996533 -20260050 + AluY SINE Alu 1 298 -13 1700 161 3 60 chr2 232996854 232997171 -20259412 - AluJb SINE Alu -13 299 1 369 136 0 0 chr2 232997457 232997523 -20259060 + (TC)n Simple_repeat Simple_repeat 2 67 0 1689 144 45 61 chr2 232997934 232998247 -20258336 + AluJo SINE Alu 1 308 -4 341 278 110 18 chr2 232999490 232999761 -20256822 + L1M4 LINE L1 5532 5835 -302 21 0 0 0 chr2 232999942 232999963 -20256620 + AT_rich Low_complexity Low_complexity 1 21 0 223 206 15 23 chr2 233002786 233002872 -20253711 + A-rich Low_complexity Low_complexity 1 130 0 799 254 60 0 chr2 233003024 233003225 -20253358 - MIR SINE MIR -21 241 29 188 65 0 32 chr2 233003707 233003738 -20252845 + (TTTC)n Simple_repeat Simple_repeat 2 31 0 747 238 0 7 chr2 233003763 233003910 -20252673 - FRAM SINE Alu -30 146 1 198 309 90 12 chr2 233004594 233004697 -20251886 + MIR SINE MIR 44 151 -63 645 225 30 68 chr2 233005538 233005571 -20251012 + L1MC5 LINE L1 7700 7733 -228 1890 136 34 3 chr2 233005571 233005865 -20250718 + AluSg SINE Alu 1 303 -7 645 225 30 68 chr2 233005865 233006067 -20250516 + L1MC5 LINE L1 7733 7926 -35 921 171 6 29 chr2 233006551 233006726 -20249857 - FRAM SINE Alu -10 166 1 1477 212 34 0 chr2 233006861 233007154 -20249429 + AluJo SINE Alu 1 303 -9 735 311 129 9 chr2 233007548 233008011 -20248572 + L2 LINE L2 2586 3097 -216 954 181 109 64 chr2 233008330 233008604 -20247979 + L1MC5 LINE L1 7302 7597 -364 2133 80 0 0 chr2 233008604 233008866 -20247717 + AluSc SINE Alu 40 301 -8 954 181 109 64 chr2 233008866 233008950 -20247633 + L1MC5 LINE L1 7597 7676 -285 948 158 22 16 chr2 233009428 233009611 -20246972 + L1PA16 LINE L1 5977 6160 -6 1994 150 3 0 chr2 233009611 233009917 -20246666 + AluSx SINE Alu 1 307 -5 2248 67 3 20 chr2 233010867 233011165 -20245418 + AluYa5 SINE Alu 3 295 -16 1280 111 0 11 chr2 233011166 233011347 -20245236 + AluSg/x SINE Alu 134 312 0 22 0 0 0 chr2 233011900 233011922 -20244661 + AT_rich Low_complexity Low_complexity 1 22 0 216 213 66 0 chr2 233012569 233012630 -20243953 + MIR SINE MIR 185 249 -13 487 147 0 0 chr2 233013304 233013379 -20243204 - AluY SINE Alu -18 293 219 1141 113 0 0 chr2 233013379 233013529 -20243054 - AluSq SINE Alu -160 153 4 227 155 241 0 chr2 233013659 233013717 -20242866 - MER113 DNA MER1_type? -408 113 42 25 0 0 0 chr2 233014526 233014551 -20242032 + AT_rich Low_complexity Low_complexity 1 25 0 272 152 87 0 chr2 233014836 233014882 -20241701 + L2 LINE L2 3262 3311 -2 335 302 70 29 chr2 233017490 233017662 -20238921 + MER5A DNA MER1_type 9 187 -2 306 348 146 0 chr2 233017713 233017871 -20238712 - MIR SINE MIR -19 243 63 202 329 41 0 chr2 233017877 233017950 -20238633 + L2 LINE L2 3238 3313 0 2380 82 16 7 chr2 233017974 233018278 -20238305 + AluSx SINE Alu 1 307 -5 2381 87 0 10 chr2 233018761 233019073 -20237510 + AluY SINE Alu 1 309 -2 1286 227 125 31 chr2 233019148 233019637 -20236946 + MLT1H LTR MaLR 13 547 -2 1438 106 12 25 chr2 233020220 233020465 -20236118 + L1MA5 LINE L1 6059 6300 0 563 282 99 6 chr2 233020559 233020740 -20235843 + MIR SINE MIR 33 230 -32 24 32 0 0 chr2 233021305 233021336 -20235247 + AT_rich Low_complexity Low_complexity 1 31 0 1822 166 0 0 chr2 233021760 233022050 -20234533 - AluJo SINE Alu -22 290 1 379 293 211 0 chr2 233022503 233022636 -20233947 + MIR SINE MIR 31 191 -71 31 0 0 0 chr2 233022809 233022840 -20233743 + AT_rich Low_complexity Low_complexity 1 31 0 193 304 149 19 chr2 233023293 233023442 -20233141 + L2 LINE L2 3099 3312 -1 1616 136 25 0 chr2 233023805 233024048 -20232535 + AluSp SINE Alu 1 249 -64 485 167 0 0 chr2 233024073 233024163 -20232420 + AluSp/q SINE Alu 221 310 -3 595 309 139 22 chr2 233024237 233024460 -20232123 - MIR SINE MIR -3 259 11 935 196 0 0 chr2 233024677 233024840 -20231743 + FRAM SINE Alu 1 163 -3 180 77 0 0 chr2 233024850 233024876 -20231707 + (A)n Simple_repeat Simple_repeat 1 26 0 333 272 11 0 chr2 233024887 233024979 -20231604 + L1ME LINE L1 500 592 -5478 21 36 0 0 chr2 233025335 233025363 -20231220 + AT_rich Low_complexity Low_complexity 1 28 0 2506 70 3 0 chr2 233025411 233025713 -20230870 + AluSp SINE Alu 2 304 -9 21 57 0 0 chr2 233025765 233025800 -20230783 + AT_rich Low_complexity Low_complexity 1 35 0 373 277 7 108 chr2 233026159 233026307 -20230276 + MER5B DNA MER1_type 1 133 -45 2006 168 0 0 chr2 233027807 233028116 -20228467 + AluJb SINE Alu 1 309 -3 2054 81 74 3 chr2 233028134 233028417 -20228166 + AluY SINE Alu 1 303 -8 431 279 107 42 chr2 233028696 233029126 -20227457 + L1ME LINE L1 444 901 -5169 1353 220 190 12 chr2 233029131 233029636 -20226947 + L1MEc LINE L1 44 638 -5758 835 201 65 55 chr2 233029645 233029724 -20226859 + L1M4 LINE L1 3147 3224 -2922 1562 173 28 14 chr2 233029724 233030013 -20226570 + AluJo SINE Alu 12 304 -8 835 201 65 55 chr2 233030013 233030226 -20226357 + L1M4 LINE L1 3224 3442 -2704 23 54 0 0 chr2 233030771 233030808 -20225775 + AT_rich Low_complexity Low_complexity 1 37 0 335 264 24 32 chr2 233031451 233031576 -20225007 + GA-rich Low_complexity Low_complexity 3 126 0 228 293 35 0 chr2 233031848 233031906 -20224677 - L2 LINE L2 -67 3205 3146 1182 206 9 5 chr2 233032220 233032438 -20224145 + AluJo SINE Alu 3 221 -91 302 67 44 0 chr2 233032438 233032483 -20224100 + AluJb SINE Alu 87 133 -169 1598 184 17 7 chr2 233032486 233032780 -20223803 + AluJb SINE Alu 1 297 -15 590 277 32 117 chr2 233033034 233033316 -20223267 + L3 LINE CR1 1318 1575 -2 214 345 36 43 chr2 233033326 233033465 -20223118 + MER5A DNA MER1_type 52 189 0 636 179 162 0 chr2 233033473 233033629 -20222954 - MER5A DNA MER1_type 0 189 6 2227 108 3 3 chr2 233034013 233034310 -20222273 - AluSx SINE Alu -15 297 1 390 208 158 0 chr2 233034319 233034420 -20222163 - MIR3 SINE MIR -11 197 81 21 0 0 0 chr2 233035038 233035059 -20221524 + AT_rich Low_complexity Low_complexity 1 21 0 1009 203 47 0 chr2 233035275 233035487 -20221096 + MER58A DNA MER1_type 1 222 -2 338 274 9 19 chr2 233036365 233036471 -20220112 + GA-rich Low_complexity Low_complexity 1 105 0 2115 146 24 15 chr2 233036634 233036970 -20219613 - MER44D DNA MER2_type 0 609 1 425 222 49 152 chr2 233037115 233037320 -20219263 - MIR3 SINE MIR -6 202 19 900 92 8 0 chr2 233039648 233039767 -20216816 + AluSp/q SINE Alu 157 276 -37 843 117 8 8 chr2 233039782 233039902 -20216681 + AluSq/x SINE Alu 1 120 -193 519 145 244 8 chr2 233039902 233040033 -20216550 - MER5A DNA MER1_type -22 167 6 2415 89 3 10 chr2 233040954 233041268 -20215315 + AluSx SINE Alu 1 312 0 352 310 37 78 chr2 233041515 233041757 -20214826 + MIR SINE MIR 29 260 -2 431 385 56 0 chr2 233041917 233042096 -20214487 - L2 LINE L2 -8 3264 3076 345 141 0 31 chr2 233042641 233042705 -20213878 + MLT1F LTR MaLR 4 65 -477 1087 200 61 12 chr2 233042705 233042950 -20213633 + MLT1F1 LTR MaLR 310 566 -1 266 125 0 0 chr2 233042950 233042990 -20213593 + MLT1F1 LTR MaLR 528 567 0 349 230 11 23 chr2 233042990 233043077 -20213506 + MLT1F-int LTR MaLR 1 86 -1285 638 288 96 11 chr2 233043129 233043410 -20213173 + MLT1F-int LTR MaLR 291 595 -776 1057 274 37 101 chr2 233043684 233044337 -20212246 + MLT1F-int LTR MaLR 756 1366 -5 2050 218 48 50 chr2 233044343 233044881 -20211702 + MLT1F LTR MaLR 2 538 -4 1697 161 32 0 chr2 233045640 233045919 -20210664 - AluJo SINE Alu -12 300 13 2148 138 49 9 chr2 233046187 233046534 -20210049 + MER46B DNA MER2_type 1 236 0 2140 81 24 7 chr2 233046926 233047224 -20209359 + AluSg1 SINE Alu 1 303 -6 471 261 278 8 chr2 233047360 233047601 -20208982 + L2 LINE L2 3003 3308 -5 201 286 24 24 chr2 233047721 233047805 -20208778 + L2 LINE L2 3228 3311 -2 658 238 92 22 chr2 233048765 233048992 -20207591 + MLT1D LTR MaLR 1 243 -262 1150 66 84 12 chr2 233049039 233049205 -20207378 + L1PA11 LINE L1 5969 6146 -28 693 222 74 6 chr2 233049211 233049387 -20207196 + MLT1D LTR MaLR 318 505 0 274 180 60 0 chr2 233049390 233049440 -20207143 - MIR SINE MIR -98 164 112 2040 155 0 0 chr2 233049739 233050048 -20206535 + AluSx SINE Alu 2 310 -2 332 222 60 51 chr2 233050120 233050183 -20206400 + MIR SINE MIR 111 177 -85 1512 170 67 4 chr2 233050183 233050453 -20206130 + AluJb SINE Alu 12 298 -14 332 222 60 51 chr2 233050453 233050506 -20206077 + MIR SINE MIR 177 228 -34 1246 298 46 20 chr2 233050868 233051453 -20205130 + L1ME3A LINE L1 5344 5964 -206 2304 187 89 35 chr2 233051570 233051955 -20204628 - MLT2B1 LTR ERVL 0 520 101 2215 122 10 0 chr2 233051955 233052251 -20204332 + AluSx SINE Alu 1 299 -13 2304 187 89 35 chr2 233052251 233052358 -20204225 - MLT2B1 LTR ERVL -419 101 1 2149 94 45 0 chr2 233052586 233052874 -20203709 - AluSq SINE Alu -12 301 1 560 319 91 51 chr2 233052900 233053473 -20203110 - L1M4 LINE L1 -1000 5146 4551 484 281 19 36 chr2 233053560 233053770 -20202813 + L2 LINE L2 3055 3299 -14 402 245 135 42 chr2 233053894 233054131 -20202452 + L1ME4a LINE L1 5411 5669 -452 422 263 9 9 chr2 233054137 233054251 -20202332 + L1ME4a LINE L1 5713 5826 -295 2382 80 0 3 chr2 233054262 233054561 -20202022 - AluSc SINE Alu -11 298 1 1235 180 4 18 chr2 233054649 233054877 -20201706 - AluJo SINE Alu -2 310 86 278 261 0 61 chr2 233054901 233054925 -20201658 + L1ME4a LINE L1 5920 5944 -177 2116 135 0 10 chr2 233054925 233055228 -20201355 + AluSq SINE Alu 1 300 -13 278 261 0 61 chr2 233055228 233055318 -20201265 + L1ME4a LINE L1 5944 6027 -94 242 200 105 105 chr2 233055755 233055850 -20200733 + MIR SINE MIR 117 211 -51 2505 74 0 6 chr2 233056299 233056610 -20199973 - AluY SINE Alu -2 309 1 441 335 57 16 chr2 233056793 233056987 -20199596 + MIR SINE MIR 51 252 -10 391 317 65 62 chr2 233057048 233057166 -20199417 + L2 LINE L2 2161 2277 -1037 2445 80 0 10 chr2 233057166 233057479 -20199104 - AluY SINE Alu -1 310 1 391 317 65 62 chr2 233057479 233057698 -20198885 + L2 LINE L2 2277 2499 -815 318 319 81 67 chr2 233058078 233058423 -20198160 - L2 LINE L2 -398 2916 2567 1897 189 8 40 chr2 233058456 233058832 -20197751 - MLT1A1 LTR MaLR 0 365 2 1992 113 7 17 chr2 233059159 233059450 -20197133 + AluSx SINE Alu 1 288 -24 384 40 0 0 chr2 233059932 233059982 -20196601 + (TG)n Simple_repeat Simple_repeat 1 50 0 223 269 54 32 chr2 233061169 233061262 -20195321 + L2 LINE L2 2585 2679 -635 426 280 45 38 chr2 233061343 233061475 -20195108 + L2 LINE L2 3137 3269 -3 297 282 48 29 chr2 233061477 233061580 -20195003 + L2 LINE L2 3197 3301 -12 237 287 287 20 chr2 233061635 233061785 -20194798 + MIR SINE MIR 53 242 -20 21 0 0 0 chr2 233062093 233062114 -20194469 + AT_rich Low_complexity Low_complexity 1 21 0 334 308 124 74 chr2 233062183 233062582 -20194001 + L2 LINE L2 2737 3202 -70 1467 207 32 70 chr2 233062582 233063050 -20193533 + LTR7 LTR ERV1 1 450 0 334 308 124 74 chr2 233063050 233063125 -20193458 + L2 LINE L2 3202 3272 0 23 0 0 0 chr2 233063896 233063919 -20192664 + GC_rich Low_complexity Low_complexity 1 23 0 379 268 12 18 chr2 233064105 233064242 -20192341 - L1ME2 LINE L1 0 6166 6029 416 210 0 12 chr2 233064812 233064893 -20191690 + MER5B DNA MER1_type 1 80 -98 2266 81 3 0 chr2 233064899 233065222 -20191361 - AluSp SINE Alu 0 324 1 198 186 0 23 chr2 233065367 233065410 -20191173 - MIR SINE MIR -63 199 158 853 234 66 25 chr2 233065437 233065681 -20190902 - MIR SINE MIR -1 261 8 505 212 83 15 chr2 233066002 233066134 -20190449 - MIR SINE MIR -63 199 59 945 243 88 72 chr2 233066322 233066469 -20190114 - L1MC5 LINE L1 -51 7910 7767 1178 139 89 0 chr2 233066469 233066671 -20189912 - L1PA15 LINE L1 -4 6161 5942 945 243 88 72 chr2 233066671 233066845 -20189738 - L1MC5 LINE L1 -194 7767 7597 840 165 0 15 chr2 233066845 233066978 -20189605 - FLAM_C SINE Alu 0 133 3 945 243 88 72 chr2 233066978 233067346 -20189237 - L1MC5 LINE L1 -364 7597 7261 253 242 52 59 chr2 233067405 233067480 -20189103 - L1MC4 LINE L1 -746 7215 7141 2349 44 0 0 chr2 233067480 233067752 -20188831 - AluY SINE Alu -3 308 37 253 242 52 59 chr2 233067752 233067968 -20188615 - L1MC4 LINE L1 -820 7141 6956 812 128 0 24 chr2 233068160 233068285 -20188298 - FLAM_C SINE Alu -10 133 12 207 0 0 0 chr2 233068292 233068315 -20188268 + (ATCTG)n Simple_repeat Simple_repeat 1 23 0 1733 256 63 2 chr2 233068329 233068787 -20187796 - L1ME2 LINE L1 -223 5943 5458 1005 89 0 0 chr2 233069308 233069431 -20187152 + AluY SINE Alu 1 123 -188 3046 201 25 40 chr2 233070276 233070668 -20185915 - L1ME2 LINE L1 -749 5397 5001 2187 108 0 14 chr2 233070668 233070965 -20185618 + AluSq SINE Alu 1 293 -20 3046 201 25 40 chr2 233070965 233071505 -20185078 - L1ME2 LINE L1 -1145 5001 4566 769 162 167 24 chr2 233071528 233071699 -20184884 - L1MC4 LINE L1 -204 7838 7630 1544 175 161 36 chr2 233071699 233072140 -20184443 + LTR54B LTR ERV1 1 496 -2 769 162 167 24 chr2 233072140 233072178 -20184405 - L1MC4 LINE L1 -412 7630 7599 2130 234 123 24 chr2 233073160 233073828 -20182755 - MER21B LTR ERV1 -111 752 19 348 225 11 45 chr2 233073859 233073948 -20182635 - MER21B LTR ERV1 -773 90 5 383 170 11 85 chr2 233073949 233074043 -20182540 + L1MB1 LINE L1 6081 6167 -1 573 248 250 77 chr2 233074066 233074586 -20181997 - L1MC4 LINE L1 -67 7975 7366 2037 185 21 74 chr2 233074617 233074931 -20181652 + L1MB5 LINE L1 5681 5950 -224 1877 182 0 0 chr2 233074931 233075233 -20181350 + AluJo SINE Alu 1 302 -10 2037 185 21 74 chr2 233075233 233075447 -20181136 + L1MB5 LINE L1 5950 6174 0 2269 103 3 0 chr2 233075455 233075746 -20180837 + AluSx SINE Alu 1 292 -20 2266 116 0 7 chr2 233076131 233076434 -20180149 + AluSx SINE Alu 1 301 -11 340 270 129 58 chr2 233076610 233076705 -20179878 + L1ME LINE L1 5538 5625 -496 2277 103 0 0 chr2 233076705 233076997 -20179586 - AluSg SINE Alu -18 292 1 340 270 129 58 chr2 233076997 233077142 -20179441 + L1ME LINE L1 5625 5795 -326 315 348 132 13 chr2 233077390 233077617 -20178966 - MIR SINE MIR 0 262 9 2252 113 7 0 chr2 233077712 233078022 -20178561 - AluSq SINE Alu -1 312 1 302 214 83 12 chr2 233078390 233078474 -20178109 + MIR SINE MIR 103 192 -70 2298 116 0 3 chr2 233078955 233079266 -20177317 + AluSx SINE Alu 3 312 0 192 250 0 0 chr2 233079516 233079556 -20177027 - MIR SINE MIR -1 261 222 369 167 0 0 chr2 233079706 233079772 -20176811 - L1M4 LINE L1 -3642 2504 2439 263 288 24 48 chr2 233080060 233080185 -20176398 + MIR3 SINE MIR 63 184 -24 285 253 20 71 chr2 233080212 233080311 -20176272 + MIR SINE MIR 159 252 -10 402 296 65 0 chr2 233081417 233081525 -20175058 + L2 LINE L2 3142 3256 -16 1952 148 0 7 chr2 233081765 233082068 -20174515 + AluJb SINE Alu 1 301 -11 2134 122 10 3 chr2 233082072 233082375 -20174208 + AluSx SINE Alu 4 308 -4 257 299 23 0 chr2 233082879 233082966 -20173617 - MER117 DNA MER1_type -108 89 1 2090 102 0 11 chr2 233082972 233083300 -20173283 - AluSq SINE Alu 0 326 2 445 302 65 44 chr2 233083763 233084101 -20172482 - L2 LINE L2 -473 2841 2497 358 247 82 0 chr2 233084117 233084202 -20172381 + L2 LINE L2 3181 3272 0 575 314 105 28 chr2 233084265 233084654 -20171929 - L2 LINE L2 -880 2434 2016 180 0 0 0 chr2 233085241 233085261 -20171322 + (T)n Simple_repeat Simple_repeat 1 20 0 2434 133 28 19 chr2 233085269 233085630 -20170953 - THE1B LTR MaLR 0 364 1 526 197 42 63 chr2 233085774 233085916 -20170667 + MER91C DNA MER1_type 1 139 -1 6689 72 9 8 chr2 233087560 233088456 -20168127 - L1PB1 LINE L1 0 6151 5255 1641 198 3 3 chr2 233088550 233088858 -20167725 + AluJo SINE Alu 1 308 -4 2241 93 31 3 chr2 233089369 233089659 -20166924 - AluSp SINE Alu -7 306 9 644 136 0 10 chr2 233089689 233089792 -20166791 - U13 snRNA snRNA -1 103 2 2466 80 0 0 chr2 233090795 233091094 -20165489 - AluSc SINE Alu -10 299 1 2420 90 0 6 chr2 233091279 233091590 -20164993 - AluY SINE Alu -2 309 1 989 154 12 0 chr2 233092906 233093068 -20163515 + AluSg/x SINE Alu 137 300 -12 232 167 0 0 chr2 233093068 233093104 -20163479 + polypurine Low_complexity Low_complexity 1 36 0 672 157 22 22 chr2 233093104 233093282 -20163301 + GA-rich Low_complexity Low_complexity 1 178 0 464 154 65 12 chr2 233093300 233093469 -20163114 + GA-rich Low_complexity Low_complexity 3 180 0 183 139 0 0 chr2 233093470 233093506 -20163077 + (GGGGA)n Simple_repeat Simple_repeat 4 39 0 198 331 99 46 chr2 233093634 233093785 -20162798 + MIR SINE MIR 49 207 -55 997 224 151 58 chr2 233093896 233094426 -20162157 + L1MC4 LINE L1 7464 8042 0 519 164 67 0 chr2 233094541 233094645 -20161938 + AluSg/x SINE Alu 198 308 -1 23 0 0 0 chr2 233094677 233094700 -20161883 + AT_rich Low_complexity Low_complexity 1 23 0 1164 215 80 8 chr2 233094775 233095178 -20161405 - MER34 LTR ERV1 0 542 69 274 23 23 23 chr2 233095178 233095222 -20161361 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 1164 215 80 8 chr2 233095222 233095285 -20161298 - MER34 LTR ERV1 -473 69 12 2666 37 0 0 chr2 233096135 233096432 -20160151 + AluY SINE Alu 1 297 -14 3782 100 49 0 chr2 233096683 233097211 -20159372 - MER41A LTR ERV1 0 554 1 273 276 67 9 chr2 233097440 233097545 -20159038 + MIR SINE MIR 94 204 -58 2136 135 0 0 chr2 233097983 233098280 -20158303 + AluSx SINE Alu 1 297 -15 1696 189 16 7 chr2 233098705 233099011 -20157572 + AluSx SINE Alu 1 309 -3 200 42 0 0 chr2 233099012 233099036 -20157547 + (GGAA)n Simple_repeat Simple_repeat 3 26 0 647 185 35 12 chr2 233099037 233099210 -20157373 + GA-rich Low_complexity Low_complexity 1 177 0 245 156 278 11 chr2 233099249 233099339 -20157244 - MIR SINE MIR -78 130 17 2193 110 0 16 chr2 233099859 233100176 -20156407 - AluSx SINE Alu 0 312 1 262 284 53 53 chr2 233100528 233100753 -20155830 - L1MC4a LINE L1 -357 5813 5706 1675 102 0 34 chr2 233100886 233101121 -20155462 + AluSx SINE Alu 64 290 -22 31 0 0 0 chr2 233101689 233101720 -20154863 + AT_rich Low_complexity Low_complexity 1 31 0 2152 116 0 0 chr2 233102040 233102360 -20154223 + AluSx SINE Alu 1 320 0 2394 99 0 0 chr2 233102875 233103179 -20153404 + AluSx SINE Alu 1 304 -8 327 302 19 0 chr2 233103245 233103351 -20153232 + L2 LINE L2 3206 3313 0 2399 87 0 23 chr2 233104538 233104848 -20151735 + AluSq SINE Alu 1 303 -10 182 324 81 0 chr2 233105952 233106026 -20150557 - MIR3 SINE MIR -21 187 108 22 0 0 0 chr2 233106577 233106599 -20149984 + AT_rich Low_complexity Low_complexity 1 22 0 325 265 31 0 chr2 233107110 233107208 -20149375 + (TA)n Simple_repeat Simple_repeat 1 101 0 884 125 25 12 chr2 233107871 233108031 -20148552 + L1MB7 LINE L1 6012 6173 -11 2237 121 0 0 chr2 233108238 233108545 -20148038 + AluSx SINE Alu 1 307 -5 341 340 73 30 chr2 233108669 233108901 -20147682 - MIR SINE MIR 0 262 21 2227 93 0 42 chr2 233108997 233109307 -20147276 + AluSc SINE Alu 1 297 -12 2244 92 7 0 chr2 233109564 233109883 -20146700 + AluSx SINE Alu 1 321 0 246 208 50 10 chr2 233110353 233110454 -20146129 + (TA)n Simple_repeat Simple_repeat 1 105 0 2089 145 0 0 chr2 233110560 233110856 -20145727 + AluJb SINE Alu 1 296 -16 2279 106 103 0 chr2 233111585 233111915 -20144668 - THE1B LTR MaLR 0 364 1 10753 97 51 4 chr2 233111915 233113424 -20143159 - THE1B-int LTR MaLR 0 1580 1 2613 108 11 3 chr2 233113424 233113785 -20142798 - THE1B LTR MaLR 0 364 1 2316 90 0 32 chr2 233114687 233114997 -20141586 + AluY SINE Alu 1 300 -11 2068 145 0 0 chr2 233115004 233115301 -20141282 + AluSx SINE Alu 3 299 -13 1844 159 0 10 chr2 233115315 233115605 -20140978 + AluJo SINE Alu 4 290 -22 343 217 14 0 chr2 233115956 233116025 -20140558 - MER81 DNA DNA 0 114 45 1807 225 66 7 chr2 233116062 233116489 -20140094 - MER41B LTR ERV1 -36 599 148 228 211 0 0 chr2 233116526 233116564 -20140019 - MER81 DNA DNA -76 38 1 1423 180 120 0 chr2 233116643 233116910 -20139673 - AluSg SINE Alu -11 299 1 2326 109 0 0 chr2 233117425 233117727 -20138856 + AluSx SINE Alu 1 302 -10 234 0 0 0 chr2 233117727 233117753 -20138830 + (TA)n Simple_repeat Simple_repeat 2 27 0 2338 85 7 26 chr2 233117915 233118222 -20138361 + AluSx SINE Alu 1 301 -11 255 298 0 0 chr2 233119066 233119123 -20137460 - MLT1L LTR MaLR -211 404 348 1553 149 3 110 chr2 233119141 233119476 -20137107 - AluJb SINE Alu -3 299 1 306 194 32 0 chr2 233119505 233119567 -20137016 - MLT1L LTR MaLR -347 268 205 270 222 12 62 chr2 233119538 233119619 -20136964 - MLT1J LTR MaLR -341 170 94 * 1280 237 80 0 chr2 233119625 233119937 -20136646 - MER58B DNA MER1_type -1 340 4 1608 199 0 4 chr2 233120394 233120675 -20135908 - AluJo SINE Alu -30 282 3 324 189 55 24 chr2 233120811 233120938 -20135645 + (TA)n Simple_repeat Simple_repeat 2 132 0 807 289 122 76 chr2 233120966 233121042 -20135541 - MLT1K LTR MaLR -63 525 454 2237 119 3 3 chr2 233121042 233121353 -20135230 + AluSx SINE Alu 1 311 -1 807 289 122 76 chr2 233121353 233121704 -20134879 - MLT1K LTR MaLR -134 454 75 2600 64 0 0 chr2 233121704 233122015 -20134568 + AluY SINE Alu 1 311 0 191 388 21 16 chr2 233122207 233122395 -20134188 - MER5A DNA MER1_type 0 189 1 869 288 85 29 chr2 233122416 233122794 -20133789 - MLT1J LTR MaLR -16 495 97 351 0 0 0 chr2 233122834 233122873 -20133710 + (CA)n Simple_repeat Simple_repeat 2 40 0 1659 266 122 46 chr2 233122929 233123913 -20132670 + HAL1 LINE L1 2 1060 -1447 560 276 139 9 chr2 233123880 233124203 -20132380 + HAL1 LINE L1 2140 2504 -3 * 442 204 111 58 chr2 233124746 233124954 -20131629 + MLT1L LTR MaLR 110 392 -223 264 315 168 21 chr2 233125540 233125683 -20130900 - MIR SINE MIR -70 192 29 406 267 64 27 chr2 233126378 233126565 -20130018 + MIR SINE MIR 69 262 0 1709 134 84 37 chr2 233126678 233126976 -20129607 + AluSx SINE Alu 1 312 0 1093 158 57 44 chr2 233126990 233127218 -20129365 + AluJo SINE Alu 82 312 0 219 366 0 12 chr2 233127784 233127866 -20128717 + L2 LINE L2 3106 3186 -86 453 293 12 48 chr2 233128158 233128325 -20128258 + MIR3 SINE MIR 30 190 -18 481 272 28 42 chr2 233128755 233128972 -20127611 + L2 LINE L2 3100 3313 0 4847 159 54 15 chr2 233129276 233130256 -20126327 - L1MB7 LINE L1 -16 6168 5134 4109 143 36 15 chr2 233130486 233131159 -20125424 - LTR8 LTR ERV1 -4 687 1 283 270 0 40 chr2 233131287 233131366 -20125217 - MIR SINE MIR -78 130 54 2798 110 11 40 chr2 233131366 233131436 -20125147 - MSTB1 LTR MaLR 0 432 361 2235 128 3 3 chr2 233131436 233131748 -20124835 + AluSx SINE Alu 1 312 0 2798 110 11 40 chr2 233131748 233132122 -20124461 - MSTB1 LTR MaLR -71 361 1 283 270 0 40 chr2 233132122 233132142 -20124441 - MIR SINE MIR -154 54 35 1477 158 4 0 chr2 233132368 233132608 -20123975 - L1MB7 LINE L1 -317 5867 5627 1023 120 0 0 chr2 233132608 233132750 -20123833 + AluJb SINE Alu 158 299 -13 2298 109 0 0 chr2 233133054 233133356 -20123227 + AluSx SINE Alu 1 302 -10 252 0 0 0 chr2 233133385 233133413 -20123170 + (T)n Simple_repeat Simple_repeat 1 28 0 760 180 47 12 chr2 233133474 233133646 -20122937 + L1MD3 LINE L1 7808 7985 -10 23 0 0 0 chr2 233133792 233133815 -20122768 + AT_rich Low_complexity Low_complexity 1 23 0 2037 103 3 31 chr2 233133932 233134223 -20122360 - AluSg SINE Alu -11 299 17 1993 134 3 0 chr2 233134395 233134678 -20121905 - AluSx SINE Alu -28 284 1 446 185 25 0 chr2 233134692 233134773 -20121810 - AluJo/FRAM SINE Alu -28 284 202 1959 149 17 0 chr2 233134773 233135069 -20121514 + AluJb SINE Alu 1 301 -11 739 133 9 3 chr2 233135890 233136018 -20120565 + L1PA14 LINE L1 5979 6104 -59 2182 107 43 0 chr2 233136034 233136334 -20120249 + AluSq SINE Alu 1 313 0 549 246 9 118 chr2 233136336 233136556 -20120027 + MER102a DNA MER1_type 124 319 -11 1044 155 18 59 chr2 233136666 233136709 -20119874 - L1MB4 LINE L1 -6 6174 6131 2270 101 0 19 chr2 233136709 233137016 -20119567 - AluSc SINE Alu -8 301 1 1044 155 18 59 chr2 233137016 233137191 -20119392 - L1MB4 LINE L1 -49 6131 5965 614 181 101 29 chr2 233137191 233137329 -20119254 - MER110 LTR ERV1 -343 148 1 186 71 0 0 chr2 233137678 233137706 -20118877 + (CA)n Simple_repeat Simple_repeat 1 28 0 1134 165 52 19 chr2 233138450 233138662 -20117921 - MER20 DNA MER1_type 0 219 1 1040 85 0 0 chr2 233139134 233139263 -20117320 + AluSg SINE Alu 1 129 -181 265 128 0 0 chr2 233139264 233139303 -20117280 + MLT2A1 LTR ERVL 398 436 -8 559 169 24 32 chr2 233139668 233139680 -20116903 - L1MC1 LINE L1 -1 6332 6321 1850 179 0 3 chr2 233139680 233139981 -20116602 - AluJo SINE Alu -12 300 1 559 169 24 32 chr2 233139981 233140092 -20116491 - L1MC1 LINE L1 -12 6321 6210 429 219 8 0 chr2 233140268 233140391 -20116192 - L1MA7 LINE L1 -8 6283 6160 4323 170 30 31 chr2 233140391 233141880 -20114703 - L1MA9 LINE L1 -245 6067 4582 26 0 0 0 chr2 233141898 233141924 -20114659 + AT_rich Low_complexity Low_complexity 1 26 0 1641 188 0 14 chr2 233141926 233142214 -20114369 - AluJo SINE Alu -18 294 11 2417 102 0 0 chr2 233142668 233142981 -20113602 - AluSq SINE Alu 0 313 1 2582 148 14 14 chr2 233143070 233143504 -20113079 - MER57B LTR ERV1 0 434 1 190 267 15 111 chr2 233143599 233143734 -20112849 - MIR SINE MIR -112 150 29 2118 174 8 3 chr2 233143748 233144105 -20112478 + MLT1A1 LTR MaLR 7 365 0 1261 212 32 10 chr2 233144301 233144612 -20111971 + MER33 DNA MER1_type 6 323 -1 554 164 212 20 chr2 233145439 233145585 -20110998 + MER5B DNA MER1_type 5 178 0 304 308 48 27 chr2 233145585 233145731 -20110852 - MIR3 SINE MIR -48 160 12 2189 115 0 7 chr2 233145746 233146041 -20110542 - AluSq SINE Alu -20 293 1 189 297 16 0 chr2 233146308 233146372 -20110211 + L2 LINE L2 3208 3272 0 390 231 156 31 chr2 233147001 233147161 -20109422 + MER5A DNA MER1_type 4 183 -6 807 181 38 118 chr2 233147197 233147434 -20109149 + MER20 DNA MER1_type 2 219 0 1768 162 4 0 chr2 233147486 233147758 -20108825 + AluJo SINE Alu 10 282 -30 1219 130 0 11 chr2 233147955 233148132 -20108451 - FRAM SINE Alu -2 174 1 264 172 62 0 chr2 233148505 233148569 -20108014 - MER5B DNA MER1_type -63 115 48 237 252 84 9 chr2 233148789 233148896 -20107687 - L1ME4a LINE L1 -34 6087 5973 255 221 36 136 chr2 233149160 233149300 -20107283 + L2 LINE L2 3140 3265 -7 2455 71 0 3 chr2 233149422 233149718 -20106865 - AluY SINE Alu -16 295 1 1534 162 40 50 chr2 233149774 233150071 -20106512 + AluJo SINE Alu 3 296 -16 1953 160 3 3 chr2 233150255 233150555 -20106028 + AluSx SINE Alu 1 300 -12 2586 88 59 0 chr2 233150766 233151120 -20105463 - THE1C LTR MaLR 0 375 1 705 189 53 0 chr2 233151297 233151429 -20105154 + AluJo SINE Alu 2 140 -172 2166 67 45 0 chr2 233151434 233151768 -20104815 + AluY SINE Alu 1 346 0 1878 181 0 3 chr2 233151857 233152166 -20104417 - AluJb SINE Alu -4 308 1 21 36 0 0 chr2 233152177 233152205 -20104378 + AT_rich Low_complexity Low_complexity 1 28 0 428 246 82 35 chr2 233152711 233152882 -20103701 + MIR SINE MIR 83 261 -1 728 183 8 0 chr2 233153326 233153446 -20103137 + FLAM_C SINE Alu 5 125 -18 1177 170 5 31 chr2 233153476 233153721 -20102862 + AluJb SINE Alu 96 312 0 1483 261 56 29 chr2 233153721 233154170 -20102413 - MLT1J LTR MaLR -48 463 3 829 130 7 43 chr2 233154385 233154523 -20102060 + FLAM_C SINE Alu 1 133 0 706 173 0 58 chr2 233154770 233154909 -20101674 - FRAM SINE Alu -8 168 38 378 252 39 0 chr2 233154963 233155090 -20101493 - L1ME1 LINE L1 -10 6156 6025 2108 128 0 0 chr2 233155096 233155402 -20101181 + AluSg SINE Alu 1 306 -4 489 204 0 0 chr2 233155406 233155494 -20101089 + MER31-int LTR ERV1 649 736 -6801 414 172 81 0 chr2 233155651 233155738 -20100845 + MER31-int LTR ERV1 749 842 -6695 2143 125 0 10 chr2 233155936 233156247 -20100336 - AluSx SINE Alu -4 308 1 2281 105 7 0 chr2 233156258 233156553 -20100030 - AluSc SINE Alu -12 297 1 294 189 0 89 chr2 233156555 233156645 -20099938 + MER31-int LTR ERV1 908 989 -4134 395 256 0 0 chr2 233156647 233156733 -20099850 + MER34C LTR ERV1 158 243 -342 1903 143 3 23 chr2 233156882 233157189 -20099394 - AluSx SINE Alu -11 301 1 347 213 13 13 chr2 233157584 233157659 -20098924 + MER31-int LTR ERV1 1116 1190 -5141 2096 146 0 3 chr2 233157672 233157980 -20098603 + AluJb SINE Alu 5 311 -1 243 291 18 0 chr2 233158004 233158059 -20098524 + tRNA-Glu-GAG tRNA tRNA 20 75 0 1758 210 26 49 chr2 233158078 233158531 -20098052 + MER31-int LTR ERV1 2678 3120 -3211 700 254 65 55 chr2 233158248 233158645 -20097938 + LTR57-int LTR ERVL 774 1388 -3955 * 2380 103 0 0 chr2 233158645 233158947 -20097636 + AluSc SINE Alu 1 302 -7 700 254 65 55 chr2 233158947 233159073 -20097510 + LTR57-int LTR ERVL 1388 1511 -3832 446 264 16 47 chr2 233159082 233159275 -20097308 + MER31-int LTR ERV1 1679 1865 -3071 751 181 0 0 chr2 233159425 233159552 -20097031 + FLAM_C SINE Alu 2 128 -5 615 157 17 148 chr2 233159552 233159671 -20096912 + MER31-int LTR ERV1 2713 2846 -2186 2239 96 0 3 chr2 233159671 233159962 -20096621 + AluSx SINE Alu 1 290 -22 615 157 17 148 chr2 233159962 233160137 -20096446 + MER31-int LTR ERV1 2846 3082 -1950 1822 159 30 3 chr2 233160137 233160432 -20096151 + AluSx SINE Alu 1 303 -9 3000 134 8 77 chr2 233160470 233161110 -20095473 + MER31-int LTR ERV1 3712 4307 -2024 827 75 9 0 chr2 233161110 233161216 -20095367 - THE1B LTR MaLR 0 364 258 2694 92 46 27 chr2 233161230 233161643 -20094940 + LTR43 LTR ERV1 175 595 -7 2350 95 3 49 chr2 233161729 233162096 -20094487 - L1PB2 LINE L1 -2 6149 5800 281 184 0 13 chr2 233162107 233162183 -20094400 + (TA)n Simple_repeat Simple_repeat 2 76 0 3646 84 4 12 chr2 233162183 233162230 -20094353 - L1PB2 LINE L1 -360 5791 5745 2213 130 74 0 chr2 233162230 233162569 -20094014 - THE1B LTR MaLR 0 364 1 3646 84 4 12 chr2 233162569 233163035 -20093548 - L1PB2 LINE L1 -406 5745 5282 403 119 17 0 chr2 233163150 233163209 -20093374 - FLAM SINE Alu -36 107 48 2189 119 3 3 chr2 233163301 233163603 -20092980 - AluSx SINE Alu -10 302 1 531 199 0 0 chr2 233163665 233163992 -20092591 + (TG)n Simple_repeat Simple_repeat 1 327 0 249 336 73 7 chr2 233164155 233164292 -20092291 - L2 LINE L2 0 3272 3127 2008 163 50 26 chr2 233164551 233164932 -20091651 + MLT1B LTR MaLR 1 390 0 300 206 0 16 chr2 233165941 233166004 -20090579 - AluYb8 SINE Alu -6 302 241 670 128 0 0 chr2 233166018 233166112 -20090471 - AluS SINE Alu -217 95 2 314 283 99 7 chr2 233166150 233166302 -20090281 + L1ME4a LINE L1 5956 6121 0 32 0 0 0 chr2 233166302 233166334 -20090249 + AT_rich Low_complexity Low_complexity 1 32 0 2246 103 0 3 chr2 233166404 233166704 -20089879 + AluSx SINE Alu 1 299 -13 294 417 0 0 chr2 233166986 233167094 -20089489 + L2 LINE L2 3123 3230 -42 462 259 43 0 chr2 233167098 233167228 -20089355 + LTR33 LTR ERVL 2 137 -384 227 258 15 15 chr2 233167228 233167294 -20089289 - MER69 DNA AcHobo 0 2526 2461 758 178 0 23 chr2 233167305 233167434 -20089149 + FLAM_C SINE Alu 2 127 -16 946 199 249 9 chr2 233167435 233167776 -20088807 - MER69 DNA AcHobo -54 2472 2050 270 81 0 0 chr2 233167888 233167925 -20088658 + (CA)n Simple_repeat Simple_repeat 1 37 0 1152 252 85 39 chr2 233167965 233168210 -20088373 - MER69 DNA AcHobo -819 407 136 1871 167 0 34 chr2 233168210 233168534 -20088049 + AluSq SINE Alu 1 313 0 1152 252 85 39 chr2 233168534 233168677 -20087906 - MER69 DNA AcHobo -1090 136 1 889 291 129 6 chr2 233168677 233169028 -20087555 + LTR33 LTR ERVL 125 519 -2 2139 128 0 0 chr2 233169608 233169898 -20086685 + AluSx SINE Alu 5 294 -18 1811 169 20 0 chr2 233169927 233170223 -20086360 + AluJb SINE Alu 1 302 -10 431 0 20 0 chr2 233171125 233171176 -20085407 + MADE1 DNA Mariner 2 53 -27 646 288 82 12 chr2 233171355 233171612 -20084971 + MER110 LTR ERV1 166 440 -51 1834 195 54 48 chr2 233172078 233172539 -20084044 + MLT1C LTR MaLR 1 464 -3 1843 166 37 35 chr2 233172678 233173052 -20083531 - THE1C LTR MaLR 0 375 1 1978 139 20 7 chr2 233173676 233173977 -20082606 + AluSx SINE Alu 1 305 -7 1042 314 177 12 chr2 233174513 233175361 -20081222 + L3 LINE CR1 434 1421 -156 375 256 124 85 chr2 233175616 233175837 -20080746 + MLT1J LTR MaLR 237 471 -40 2183 143 0 0 chr2 233175837 233176138 -20080445 + AluSx SINE Alu 1 301 -11 375 256 124 85 chr2 233176138 233176174 -20080409 + MLT1J LTR MaLR 471 504 -7 725 160 23 183 chr2 233177456 233177689 -20078894 - MER112 DNA MER1_type -1 255 79 2185 117 3 0 chr2 233177689 233177980 -20078603 - AluSx SINE Alu -20 292 1 725 160 23 183 chr2 233177980 233178046 -20078537 - MER112 DNA MER1_type -177 79 4 3944 152 31 31 chr2 233178410 233179126 -20077457 + L1MB7 LINE L1 5441 6156 -28 397 227 11 0 chr2 233179181 233179269 -20077314 + L1ME1 LINE L1 6024 6112 -54 2475 73 0 0 chr2 233179645 233179946 -20076637 - AluY SINE Alu -10 301 1 1650 136 3 91 chr2 233180340 233180671 -20075912 - AluJo SINE Alu 0 312 11 373 332 88 22 chr2 233180698 233180924 -20075659 - MIR SINE MIR 0 262 22 438 69 0 0 chr2 233181449 233181507 -20075076 + (TG)n Simple_repeat Simple_repeat 1 58 0 1989 139 30 9 chr2 233181993 233182323 -20074260 - MER1B DNA MER1_type 0 337 1 1702 177 32 85 chr2 233182482 233182551 -20074032 + MLT1B LTR MaLR 1 72 -318 2322 113 0 0 chr2 233182551 233182861 -20073722 + AluSx SINE Alu 1 310 -2 1702 177 32 85 chr2 233182861 233183203 -20073380 + MLT1B LTR MaLR 72 390 0 634 38 13 0 chr2 233184895 233184974 -20071609 - MADE1 DNA Mariner 0 80 1 889 136 0 0 chr2 233185286 233185411 -20071172 - AluJb SINE Alu -183 129 5 2074 95 3 18 chr2 233186088 233186413 -20070170 - AluSx SINE Alu 0 323 3 1451 150 4 8 chr2 233186490 233186724 -20069859 + AluJb SINE Alu 39 271 -41 315 319 53 18 chr2 233187286 233187455 -20069128 + HAL1 LINE L1 843 1017 -1490 4363 74 19 45 chr2 233187678 233189149 -20067434 - SVA Other Other -1285 1140 1 2031 154 0 0 chr2 233189163 233189462 -20067121 - AluSx SINE Alu -13 299 1 2157 83 4 0 chr2 233189737 233190001 -20066582 - AluY SINE Alu -46 265 1 2187 118 0 0 chr2 233190177 233190465 -20066118 + AluSg SINE Alu 1 288 -22 549 0 0 0 chr2 233190469 233190530 -20066053 + (TA)n Simple_repeat Simple_repeat 1 61 0 427 294 224 14 chr2 233191498 233191712 -20064871 + L2 LINE L2 3014 3272 0 1564 169 43 114 chr2 233192602 233192840 -20063743 - MLT1B LTR MaLR 0 390 137 2461 74 0 0 chr2 233192840 233193137 -20063446 - AluY SINE Alu -14 297 1 1564 169 43 114 chr2 233193137 233193238 -20063345 - MLT1B LTR MaLR -253 137 84 2186 160 25 0 chr2 233193238 233193595 -20062988 + MER47A DNA MER2_type 1 366 0 1564 169 43 114 chr2 233193595 233193674 -20062909 - MLT1B LTR MaLR -306 84 1 237 265 51 61 chr2 233193709 233193807 -20062776 - MIR SINE MIR -21 241 145 1321 117 16 0 chr2 233194688 233194876 -20061707 - AluSg/x SINE Alu -1 309 119 317 311 66 16 chr2 233195928 233196050 -20060533 - L2 LINE L2 -1 3271 3144 189 0 0 0 chr2 233196680 233196701 -20059882 + (T)n Simple_repeat Simple_repeat 1 21 0 1581 148 57 124 chr2 233196774 233197146 -20059437 + Tigger3(Golem) DNA MER2_type 2 3028 -1 2153 143 0 0 chr2 233197284 233197584 -20058999 - AluSx SINE Alu -12 300 1 1719 119 81 8 chr2 233197776 233198036 -20058547 - AluSg SINE Alu -31 279 1 438 324 122 5 chr2 233198195 233198408 -20058175 + MIR SINE MIR 23 260 -2 2049 142 7 0 chr2 233198701 233198997 -20057586 - AluSx SINE Alu -14 298 1 316 204 0 0 chr2 233199428 233199482 -20057101 + MLT1K LTR MaLR 172 225 -363 993 166 73 49 chr2 233199505 233199710 -20056873 + MER21A LTR ERV1 13 222 -709 685 140 0 0 chr2 233199710 233199868 -20056715 + AluY SINE Alu 192 349 0 429 132 0 0 chr2 233199871 233199939 -20056644 + MER39 LTR ERV1 340 407 -300 * 2602 179 27 21 chr2 233199936 233200411 -20056172 + MER21A LTR ERV1 360 837 -94 456 281 46 13 chr2 233200618 233200771 -20055812 + MLT1K LTR MaLR 431 588 0 2332 183 61 2 chr2 233202826 233203252 -20053331 + LTR47A LTR ERVL 2 452 0 2457 45 0 7 chr2 233203366 233203655 -20052928 - AluY SINE Alu -24 287 1 1260 140 14 42 chr2 233203982 233204196 -20052387 + MER2 DNA MER2_type 3 210 -135 29 0 0 25 chr2 233204239 233204266 -20052317 + AT_rich Low_complexity Low_complexity 1 28 -11 2218 104 0 10 chr2 233204266 233204563 -20052020 - AluSx SINE Alu -18 294 1 29 0 0 25 chr2 233204563 233204575 -20052008 + AT_rich Low_complexity Low_complexity 28 39 0 424 220 76 8 chr2 233205124 233205242 -20051341 + MER112 DNA MER1_type 1 126 -134 2071 127 0 7 chr2 233205572 233205863 -20050720 + AluSx SINE Alu 1 289 -23 1733 191 18 62 chr2 233205895 233206283 -20050300 + MLT1A2 LTR MaLR 4 374 0 557 215 49 60 chr2 233206977 233207192 -20049391 + MIR SINE MIR 19 228 -34 228 362 86 9 chr2 233207411 233207527 -20049056 + L2 LINE L2 3189 3313 0 384 228 111 47 chr2 233207817 233207988 -20048595 - MIR SINE MIR -2 260 79 2028 139 7 0 chr2 233208043 233208518 -20048065 - AluJb SINE Alu 0 481 5 292 304 11 0 chr2 233208580 233208672 -20047911 - MIR3 SINE MIR -7 201 109 197 227 114 114 chr2 233209003 233209135 -20047448 - MIR SINE MIR -65 197 66 3221 145 54 2 chr2 233209423 233209960 -20046623 - L1MC1 LINE L1 -9 6324 5760 381 303 9 0 chr2 233210250 233210359 -20046224 + MIR3 SINE MIR 93 202 -6 395 214 24 0 chr2 233211090 233211174 -20045409 - L1MC1 LINE L1 -4 6329 6244 282 159 29 58 chr2 233211174 233211243 -20045340 + MLT1K LTR MaLR 522 588 0 2205 118 0 0 chr2 233211371 233211668 -20044915 + AluSx SINE Alu 1 297 -15 1966 141 7 3 chr2 233211777 233212076 -20044507 - AluSx SINE Alu -12 300 1 2048 133 13 10 chr2 233212395 233212703 -20043880 + AluJb SINE Alu 1 309 -3 229 171 135 99 chr2 233213706 233213817 -20042766 - L1ME4a LINE L1 -1 6120 6006 204 231 0 0 chr2 233213833 233213885 -20042698 + (TTTA)n Simple_repeat Simple_repeat 2 53 0 232 259 69 86 chr2 233213899 233214073 -20042510 - MIR SINE MIR -72 190 20 392 329 15 7 chr2 233214171 233214308 -20042275 - MER82 DNA MER2_type 0 653 516 1899 253 71 47 chr2 233215529 233216276 -20040307 + L1MB8 LINE L1 5412 6176 -2 2024 87 0 84 chr2 233216284 233216615 -20039968 + AluSx SINE Alu 1 305 0 307 263 91 45 chr2 233216622 233216820 -20039763 + L1MC4a LINE L1 5817 6023 -1785 2306 119 0 0 chr2 233218387 233218698 -20037885 - AluSx SINE Alu -1 311 1 272 186 186 14 chr2 233218922 233218992 -20037591 + MLT1B LTR MaLR 1 82 -308 1401 81 0 0 chr2 233218992 233219164 -20037419 + AluSg/x SINE Alu 137 308 -4 203 255 128 32 chr2 233219685 233219779 -20036804 - L2 LINE L2 -2 3311 3209 186 43 0 0 chr2 233220091 233220114 -20036469 + (TC)n Simple_repeat Simple_repeat 2 24 0 1312 149 15 5 chr2 233220114 233220309 -20036274 - AluJb SINE Alu -30 282 86 305 103 0 0 chr2 233221771 233221830 -20034753 + Alu SINE Alu 247 305 0 244 196 125 0 chr2 233221830 233221881 -20034702 + LTR16C LTR ERVL 434 491 0 1948 144 41 0 chr2 233222358 233222649 -20033934 - AluSx SINE Alu -9 303 1 423 0 0 0 chr2 233222759 233222806 -20033777 + (CA)n Simple_repeat Simple_repeat 2 48 0 805 219 11 38 chr2 233222813 233222996 -20033587 - Tigger3(Golem) DNA MER2_type -2 3027 2850 1002 230 71 44 chr2 233223020 233223316 -20033267 - LTR16A LTR ERVL -132 318 15 2428 94 3 0 chr2 233223470 233223778 -20032805 - AluSp SINE Alu -4 309 1 2177 101 10 7 chr2 233224290 233224588 -20031995 + AluSx SINE Alu 1 299 -13 1331 194 41 74 chr2 233224606 233224997 -20031586 + MLT1B LTR MaLR 6 383 -7 180 326 43 22 chr2 233225128 233225220 -20031363 + MIR SINE MIR 119 212 -50 3298 176 45 44 chr2 233225827 233226062 -20030521 + L1MB4 LINE L1 5429 5662 -518 1999 123 3 33 chr2 233226062 233226362 -20030221 + AluJb SINE Alu 5 295 -17 3298 176 45 44 chr2 233226362 233226875 -20029708 + L1MB4 LINE L1 5662 6178 -2 285 279 156 0 chr2 233226951 233227073 -20029510 - MIR SINE MIR -65 197 57 1820 155 10 36 chr2 233227570 233227879 -20028704 - AluSx SINE Alu -11 301 1 1215 209 92 33 chr2 233227928 233228067 -20028516 + AluJo SINE Alu 1 130 -182 1236 194 64 35 chr2 233228067 233228350 -20028233 + AluJo SINE Alu 1 291 -21 1215 209 92 33 chr2 233228350 233228483 -20028100 + AluJo SINE Alu 130 289 -23 21 0 0 0 chr2 233228483 233228504 -20028079 + AT_rich Low_complexity Low_complexity 1 21 0 2094 138 6 10 chr2 233228510 233228822 -20027761 + AluSx SINE Alu 1 311 -1 450 325 133 60 chr2 233228863 233229870 -20026713 + L2 LINE L2 2031 3105 -167 2343 74 0 3 chr2 233230029 233230345 -20026238 + AluSp SINE Alu 1 315 0 1318 293 41 70 chr2 233230562 233231088 -20025495 + MLT1K LTR MaLR 2 510 -78 2073 120 3 3 chr2 233231088 233231379 -20025204 - AluSx SINE Alu -19 293 3 1318 293 41 70 chr2 233231379 233231456 -20025127 + MLT1K LTR MaLR 510 588 0 784 105 26 20 chr2 233232235 233232388 -20024195 + CT-rich Low_complexity Low_complexity 1 154 0 1133 89 0 0 chr2 233232388 233232534 -20024049 - L1PA8 LINE L1 -1 6171 6026 201 74 0 0 chr2 233232996 233233023 -20023560 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 2349 107 7 0 chr2 233233161 233233540 -20023043 - AluSx SINE Alu 0 381 1 342 0 0 0 chr2 233233713 233233751 -20022832 + (TA)n Simple_repeat Simple_repeat 2 39 0 368 315 109 18 chr2 233233815 233233980 -20022603 + MIR SINE MIR 26 205 -57 423 282 46 73 chr2 233234718 233234977 -20021606 - MLT1K LTR MaLR -325 263 12 2068 100 0 0 chr2 233235502 233235772 -20020811 - AluSx SINE Alu 0 312 43 297 0 0 0 chr2 233235804 233235837 -20020746 + (TA)n Simple_repeat Simple_repeat 2 34 0 256 103 35 0 chr2 233235838 233235896 -20020687 + T-rich Low_complexity Low_complexity 4 63 0 417 210 142 114 chr2 233236182 233236358 -20020225 - MER5A DNA MER1_type 0 189 9 2352 101 0 0 chr2 233236816 233237112 -20019471 - AluSx SINE Alu -16 296 1 553 261 9 9 chr2 233237234 233237349 -20019234 - L2 LINE L2 -8 3264 3150 1287 182 50 53 chr2 233237356 233237596 -20018987 + MER33 DNA MER1_type 6 246 -2339 789 144 64 8 chr2 233237596 233237721 -20018862 - FLAM_C SINE Alu -1 132 1 1287 182 50 53 chr2 233237721 233237798 -20018785 + MER33 DNA MER1_type 246 322 -2 566 220 143 42 chr2 233237817 233237985 -20018598 - MER5A DNA MER1_type -1 188 4 1917 150 0 11 chr2 233238037 233238344 -20018239 + AluSx SINE Alu 1 304 0 206 338 35 42 chr2 233238585 233238727 -20017856 - L2 LINE L2 -8 3305 3165 2252 114 0 13 chr2 233238952 233239260 -20017323 + AluSc SINE Alu 1 304 -5 2253 94 0 32 chr2 233239452 233239588 -20016995 - AluSq SINE Alu -14 299 160 1526 139 89 115 chr2 233239588 233240048 -20016535 - LTR7 LTR ERV1 -2 448 1 2253 94 0 32 chr2 233240048 233240220 -20016363 - AluSq SINE Alu -153 160 1 419 265 34 20 chr2 233240228 233240375 -20016208 + MLT1K LTR MaLR 438 586 -2 219 307 68 81 chr2 233240761 233240899 -20015684 + L2 LINE L2 3019 3157 -156 2298 63 3 0 chr2 233240899 233241184 -20015399 + AluY SINE Alu 2 287 -24 219 307 68 81 chr2 233241184 233241341 -20015242 + L2 LINE L2 3157 3310 -3 1152 247 62 87 chr2 233241725 233242243 -20014340 + MLT1J LTR MaLR 4 508 -3 21 57 0 0 chr2 233242255 233242290 -20014293 + AT_rich Low_complexity Low_complexity 1 35 0 4571 172 7 4 chr2 233242826 233243949 -20012634 + L1PA16 LINE L1 4484 5609 -557 1217 136 71 0 chr2 233243949 233244142 -20012441 + L1PA16 LINE L1 5951 6162 -4 190 259 129 0 chr2 233244181 233244266 -20012317 + L3b LINE CR1 1251 1346 -237 1189 56 7 0 chr2 233244555 233244697 -20011886 + AluSp SINE Alu 1 143 -170 655 338 38 25 chr2 233244703 233245096 -20011487 + ERVL LTR ERVL 4377 4774 -990 269 238 88 12 chr2 233245097 233245177 -20011406 + MLT1L LTR MaLR 113 198 -417 525 232 151 27 chr2 233245237 233245422 -20011161 + MLT1L LTR MaLR 293 500 -115 1763 177 0 0 chr2 233245422 233245733 -20010850 + AluSx SINE Alu 1 311 0 286 224 92 0 chr2 233245766 233245842 -20010741 + MLT1L LTR MaLR 489 571 -44 1109 270 44 31 chr2 233245980 233246336 -20010247 + MLT1L LTR MaLR 72 422 -193 1883 149 0 39 chr2 233246336 233246517 -20010066 - AluJo SINE Alu -14 298 111 441 0 0 0 chr2 233246517 233246566 -20010017 + (TTTA)n Simple_repeat Simple_repeat 2 50 0 2253 82 0 4 chr2 233246566 233246847 -20009736 - AluSc SINE Alu -29 280 1 1883 149 0 39 chr2 233246847 233246972 -20009611 - AluJo SINE Alu -199 113 3 1109 270 44 31 chr2 233246972 233247049 -20009534 + MLT1L LTR MaLR 422 615 0 27 0 0 0 chr2 233247483 233247510 -20009073 + AT_rich Low_complexity Low_complexity 1 27 0 273 123 281 0 chr2 233247529 233247585 -20008998 + Tigger1 DNA MER2_type 1 72 -2346 501 87 0 14 chr2 233247585 233247654 -20008929 - THE1B LTR MaLR 0 364 297 1822 106 4 0 chr2 233247656 233247892 -20008691 + AluSg SINE Alu 1 237 -73 13413 125 22 13 chr2 233247895 233249487 -20007096 + Tigger1 DNA MER2_type 329 1906 -512 2277 97 10 0 chr2 233249487 233249785 -20006798 - AluSg SINE Alu -8 302 2 13413 125 22 13 chr2 233249785 233250143 -20006440 + Tigger1 DNA MER2_type 1906 2301 -117 2418 71 7 0 chr2 233250143 233250438 -20006145 - AluSq SINE Alu -15 298 2 13413 125 22 13 chr2 233250438 233250557 -20006026 + Tigger1 DNA MER2_type 2301 2417 -1 22 0 0 0 chr2 233251687 233251709 -20004874 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 233251927 233251948 -20004635 + GC_rich Low_complexity Low_complexity 1 21 0 586 284 228 22 chr2 233252683 233253275 -20003308 - L2 LINE L2 -799 2515 1802 310 316 82 18 chr2 233253300 233253471 -20003112 - L2 LINE L2 -1634 1680 1499 257 344 184 0 chr2 233254037 233254162 -20002421 - L2 LINE L2 0 3272 3125 189 352 22 33 chr2 233254285 233254376 -20002207 - L2 LINE L2 -214 3058 2969 279 0 0 0 chr2 233254407 233254438 -20002145 + (TG)n Simple_repeat Simple_repeat 2 32 0 381 190 133 76 chr2 233254687 233254764 -20001819 - MIR SINE MIR -1 261 190 2287 80 0 3 chr2 233254764 233255052 -20001531 - AluY SINE Alu -18 293 7 381 190 133 76 chr2 233255052 233255132 -20001451 - MIR SINE MIR -72 190 95 26 50 0 0 chr2 233255555 233255595 -20000988 + GC_rich Low_complexity Low_complexity 1 40 0 374 286 67 117 chr2 233255627 233256394 -20000189 - L1M2 LINE L1 -5640 1209 482 246 242 48 0 chr2 233256586 233256648 -19999935 - MIR SINE MIR -85 177 113 552 229 140 47 chr2 233256815 233257051 -19999532 - MIR SINE MIR -3 259 2 201 289 0 0 chr2 233257455 233257500 -19999083 + MIR SINE MIR 95 139 -69 263 177 0 113 chr2 233257769 233257831 -19998752 - L2 LINE L2 -37 3276 3222 2223 122 27 0 chr2 233258565 233258900 -19997683 - L1PA10 LINE L1 -57 6111 5768 200 167 21 21 chr2 233259673 233259721 -19996862 - MIR SINE MIR -134 128 81 225 304 62 0 chr2 233259776 233259888 -19996695 + L1ME LINE L1 5724 5842 -279 1562 168 129 0 chr2 233260511 233260846 -19995737 - L1MD3 LINE L1 0 8042 7678 1419 234 42 49 chr2 233260888 233260990 -19995593 - L1MC4 LINE L1 -1214 6594 6493 189 74 0 0 chr2 233260990 233261017 -19995566 + (CA)n Simple_repeat Simple_repeat 1 27 0 1419 234 42 49 chr2 233261017 233261259 -19995324 - L1MC4 LINE L1 -1315 6493 6251 2183 93 34 0 chr2 233261259 233261550 -19995033 - AluSx SINE Alu -11 301 1 1419 234 42 49 chr2 233261550 233261798 -19994785 - L1MC4 LINE L1 -1557 6251 6181 189 107 0 0 chr2 233261798 233261826 -19994757 + (TCTA)n Simple_repeat Simple_repeat 3 30 0 1419 234 42 49 chr2 233261826 233261987 -19994596 - L1MC4 LINE L1 -1627 6181 6020 854 156 114 0 chr2 233261991 233262158 -19994425 - MLT2B2 LTR ERVL -1 514 329 1062 284 66 65 chr2 233262189 233262684 -19993899 - L1M4 LINE L1 -1130 5016 4518 2812 90 8 13 chr2 233262684 233263073 -19993510 + L1MA1 LINE L1 5912 6298 -4 1062 284 66 65 chr2 233263073 233263499 -19993084 - L1M4 LINE L1 -1628 4518 4094 440 254 154 62 chr2 233263643 233263883 -19992700 + MLT1J LTR MaLR 130 391 -120 274 215 152 13 chr2 233264044 233264123 -19992460 + MIR SINE MIR 117 206 -56 184 349 102 31 chr2 233264222 233264477 -19992106 + L2 LINE L2 1536 1808 -1506 387 282 79 50 chr2 233264728 233264969 -19991614 + LTR16A1 LTR ERVL 209 456 -1 690 324 169 29 chr2 233264975 233265776 -19990807 + L2 LINE L2 1805 2729 -585 3040 163 16 33 chr2 233265776 233266260 -19990323 - L1MB8 LINE L1 -6 6172 5698 2127 128 10 0 chr2 233266260 233266556 -19990027 - AluSx SINE Alu -13 299 1 3040 163 16 33 chr2 233266556 233266649 -19989934 - L1MB8 LINE L1 -480 5698 5605 690 324 169 29 chr2 233266649 233266684 -19989899 + L2 LINE L2 2729 2758 -556 2884 77 17 0 chr2 233266934 233267283 -19989300 + THE1A LTR MaLR 1 355 0 2323 65 0 0 chr2 233267283 233267575 -19989008 + THE1A-int LTR MaLR 1 292 -1288 2760 248 86 31 chr2 233267841 233269816 -19986767 + L1 LINE L1 1979 4021 -3544 1217 202 29 10 chr2 233269818 233270105 -19986478 + L1 LINE L1 5644 5939 -1626 2174 110 25 88 chr2 233270105 233270505 -19986078 + THE1C LTR MaLR 1 375 0 1217 202 29 10 chr2 233270505 233270524 -19986059 + L1 LINE L1 5939 5956 -1609 1960 158 0 3 chr2 233271291 233271594 -19984989 - AluJb SINE Alu -10 302 1 4469 230 25 55 chr2 233272032 233272752 -19983831 - L1M4b LINE L1 -5326 1533 864 1986 109 0 0 chr2 233272752 233273017 -19983566 - AluSc SINE Alu -15 294 30 4469 230 25 55 chr2 233273017 233273561 -19983022 - L1M4b LINE L1 -5995 864 306 1677 180 30 14 chr2 233273612 233273907 -19982676 + AluJo SINE Alu 1 300 -12 789 266 104 58 chr2 233273935 233274281 -19982302 + L2 LINE L2 2945 3306 -7 609 247 37 19 chr2 233275778 233275940 -19980643 + MIR SINE MIR 2 166 -96 * 788 219 110 9 chr2 233275917 233276136 -19980447 - MIR SINE MIR -1 261 21 231 203 0 81 chr2 233276165 233276239 -19980344 + MIR SINE MIR 175 242 -20 516 266 81 0 chr2 233276840 233276964 -19979619 - MER94 DNA DNA 0 134 1 2407 86 3 0 chr2 233277179 233277482 -19979101 - AluSp SINE Alu -9 304 1 293 321 18 18 chr2 233279703 233279815 -19976768 + L2 LINE L2 2626 2737 -577 662 336 64 0 chr2 233279848 233280083 -19976500 + MIR SINE MIR 8 257 -5 246 277 84 78 chr2 233280301 233280356 -19976227 - L2 LINE L2 -1906 1408 1355 462 36 0 0 chr2 233280356 233280412 -19976171 + (TG)n Simple_repeat Simple_repeat 2 57 0 1610 191 14 0 chr2 233280413 233280695 -19975888 - AluJo SINE Alu -26 286 1 246 277 84 78 chr2 233280695 233280803 -19975780 - L2 LINE L2 -1958 1356 1242 2195 114 0 3 chr2 233283094 233283393 -19973190 - AluSc SINE Alu -11 298 1 21 0 0 0 chr2 233284874 233284895 -19971688 + AT_rich Low_complexity Low_complexity 1 21 0 23 92 0 0 chr2 233285384 233285449 -19971134 + AT_rich Low_complexity Low_complexity 1 65 0 249 324 56 33 chr2 233285810 233286140 -19970443 - L2 LINE L2 -960 2354 1936 1135 268 134 26 chr2 233286553 233287151 -19969432 + L2 LINE L2 2577 3246 -67 205 358 114 0 chr2 233288210 233288333 -19968250 - L3 LINE CR1 -42 1535 1399 2368 59 0 26 chr2 233290746 233291051 -19965532 + AluY SINE Alu 1 297 -14 2144 113 3 23 chr2 233291059 233291369 -19965214 + AluSx SINE Alu 1 304 -8 910 205 78 53 chr2 233291382 233291626 -19964957 + AluJo SINE Alu 54 303 -9 487 182 0 0 chr2 233292043 233292120 -19964463 - MER2 DNA MER2_type -1 344 268 1041 136 23 6 chr2 233292146 233292322 -19964261 - MER2 DNA MER2_type -139 206 28 22 70 0 0 chr2 233292838 233292881 -19963702 + AT_rich Low_complexity Low_complexity 1 43 0 385 287 101 0 chr2 233293028 233293157 -19963426 + MIR3 SINE MIR 66 207 -1 283 257 169 100 chr2 233294571 233294890 -19961693 - MER102b DNA MER1_type 0 341 1 23 0 0 0 chr2 233295403 233295426 -19961157 + AT_rich Low_complexity Low_complexity 1 23 0 2347 80 7 3 chr2 233295651 233295951 -19960632 + AluSg SINE Alu 1 301 -9 2164 109 3 7 chr2 233296075 233296379 -19960204 - AluSq SINE Alu -9 304 2 1142 107 0 35 chr2 233297410 233297579 -19959004 + AluY SINE Alu 133 295 -16 743 170 118 0 chr2 233298055 233298190 -19958393 + AluJb SINE Alu 136 286 -26 252 220 0 53 chr2 233298580 233298730 -19957853 + T-rich Low_complexity Low_complexity 2 143 0 22 0 0 0 chr2 233298771 233298793 -19957790 + AT_rich Low_complexity Low_complexity 1 22 0 210 37 0 0 chr2 233298893 233298920 -19957663 + (C)n Simple_repeat Simple_repeat 1 27 0 2251 117 3 0 chr2 233298960 233299269 -19957314 - AluSg SINE Alu 0 310 1 284 271 24 25 chr2 233299748 233299929 -19956654 - L1MC/D LINE L1 -325 5796 5663 29 28 0 0 chr2 233300117 233300153 -19956430 + AT_rich Low_complexity Low_complexity 1 36 0 755 232 170 5 chr2 233300345 233300569 -19956014 + MIR SINE MIR 2 262 0 2064 93 6 78 chr2 233300801 233301122 -19955461 + AluSx SINE Alu 1 298 -14 271 298 32 11 chr2 233301363 233301457 -19955126 + MIR SINE MIR 85 180 -82 24 0 0 0 chr2 233303427 233303451 -19953132 + AT_rich Low_complexity Low_complexity 1 24 0 2263 75 0 4 chr2 233304262 233304543 -19952040 - AluSq SINE Alu -14 299 20 22 0 0 0 chr2 233304597 233304619 -19951964 + AT_rich Low_complexity Low_complexity 1 22 0 213 296 102 31 chr2 233305140 233305238 -19951345 + MIR SINE MIR 22 126 -82 463 239 107 0 chr2 233305763 233305960 -19950623 - L1ME4a LINE L1 -193 5928 5711 472 204 23 11 chr2 233305983 233306101 -19950482 - L1ME4a LINE L1 -476 5645 5546 2295 99 0 10 chr2 233306149 233306461 -19950122 - AluSx SINE Alu -3 309 1 22 35 0 0 chr2 233306513 233306542 -19950041 + AT_rich Low_complexity Low_complexity 1 29 0 1308 176 82 25 chr2 233306545 233306824 -19949759 + AluJo SINE Alu 1 295 -17 667 155 16 8 chr2 233306974 233307103 -19949480 + FLAM_C SINE Alu 13 142 -1 349 176 0 68 chr2 233307241 233307315 -19949268 + MIR SINE MIR 194 262 0 199 139 0 28 chr2 233308229 233308265 -19948318 - L2 LINE L2 -224 3048 3014 1553 181 43 23 chr2 233308457 233308756 -19947827 - AluJb SINE Alu -5 307 3 23 54 0 0 chr2 233308792 233308829 -19947754 + AT_rich Low_complexity Low_complexity 1 37 0 355 279 64 101 chr2 233308833 233309052 -19947531 - L2 LINE L2 -17 3255 3045 301 171 243 0 chr2 233310176 233310246 -19946337 + L2 LINE L2 3227 3313 0 213 279 66 0 chr2 233310252 233310313 -19946270 + L2 LINE L2 3200 3264 -8 2064 130 7 3 chr2 233311170 233311477 -19945106 + AluSx SINE Alu 3 310 -2 232 293 106 16 chr2 233312394 233312517 -19944066 - L1M4 LINE L1 -1526 4620 4487 2458 68 0 7 chr2 233312680 233312989 -19943594 + AluY SINE Alu 1 307 -4 891 175 170 19 chr2 233313210 233313479 -19943104 - MER33 DNA MER1_type -22 341 1 1915 111 48 0 chr2 233313666 233313937 -19942646 - AluSq SINE Alu -29 284 1 272 281 67 37 chr2 233314040 233314175 -19942408 - L1M4 LINE L1 -2310 3836 3698 758 266 42 8 chr2 233314291 233314528 -19942055 - HAL1 LINE L1 -791 1716 1472 1512 137 46 56 chr2 233314529 233314814 -19941769 - MER1B DNA MER1_type 0 339 58 265 341 56 0 chr2 233314848 233314895 -19941688 - MER94 DNA DNA -1 133 90 2074 126 0 16 chr2 233314895 233315204 -19941379 - AluY SINE Alu -7 304 1 265 341 56 0 chr2 233315204 233315282 -19941301 - MER94 DNA DNA -44 90 1 2229 102 6 13 chr2 233315304 233315619 -19940964 - AluSp SINE Alu 0 313 1 739 246 67 91 chr2 233315624 233316254 -19940329 - HAL1 LINE L1 -1045 1462 848 243 341 68 15 chr2 233316262 233316394 -19940189 + L2 LINE L2 2596 2734 -580 1064 225 136 87 chr2 233316474 233316913 -19939670 - MLT1D LTR MaLR -1 504 1 458 269 135 20 chr2 233317363 233317608 -19938975 - L1ME LINE L1 -511 5659 5387 187 224 75 30 chr2 233317703 233317770 -19938813 - MIR SINE MIR -94 168 99 196 278 69 42 chr2 233317817 233317889 -19938694 - MIR SINE MIR -163 99 26 2153 123 0 0 chr2 233317891 233318183 -19938400 - AluSx SINE Alu -20 292 1 2546 76 8 19 chr2 233318196 233318565 -19938018 - L1PA8 LINE L1 -3 6169 5805 5180 146 16 9 chr2 233318881 233319763 -19936820 - L1MC1 LINE L1 0 6333 5446 32 67 0 0 chr2 233320027 233320087 -19936496 + AT_rich Low_complexity Low_complexity 1 60 0 1962 147 0 3 chr2 233322769 233323077 -19933506 - AluSx SINE Alu 0 307 1 241 305 114 19 chr2 233323430 233323535 -19933048 - MIR3 SINE MIR -38 170 56 181 158 88 35 chr2 233324948 233325005 -19931578 + MIR SINE MIR 166 225 -37 276 273 14 7 chr2 233325791 233325930 -19930653 + CT-rich Low_complexity Low_complexity 1 140 0 735 207 24 18 chr2 233325959 233326128 -19930455 - FRAM SINE Alu -6 170 1 30 59 0 0 chr2 233326204 233326255 -19930328 + AT_rich Low_complexity Low_complexity 1 51 0 244 330 39 39 chr2 233326879 233327058 -19929525 - L1MC/D LINE L1 -1928 5880 5702 270 233 342 0 chr2 233327091 233327211 -19929372 + L2 LINE L2 535 695 -2619 510 251 385 20 chr2 233327258 233327756 -19928827 + L2 LINE L2 1269 1948 -1366 341 253 40 0 chr2 233327757 233327856 -19928727 - L1ME LINE L1 -800 5364 5262 274 256 87 123 chr2 233328021 233328216 -19928367 - MER5A DNA MER1_type 0 189 2 2151 60 4 14 chr2 233328216 233328497 -19928086 + AluY SINE Alu 34 311 0 377 338 103 19 chr2 233328541 233328920 -19927663 + L1M4 LINE L1 4772 5182 -964 1419 124 5 5 chr2 233328925 233329143 -19927440 + AluSc SINE Alu 92 309 0 3050 141 72 17 chr2 233329155 233329680 -19926903 - MER41C LTR ERV1 0 554 1 1410 219 59 3 chr2 233330845 233331219 -19925364 - L1ME LINE L1 -1129 5017 4623 2428 73 3 3 chr2 233331305 233331608 -19924975 + AluSc SINE Alu 1 303 -6 1717 127 82 136 chr2 233332204 233332653 -19923930 - MER61B LTR ERV1 0 425 1 1535 209 0 14 chr2 233332780 233333076 -19923507 - AluJo SINE Alu -14 298 7 2873 13 0 0 chr2 233333633 233333945 -19922638 + AluYb8 SINE Alu 1 312 -6 328 164 7 0 chr2 233336086 233336161 -19920422 + LOR1-int LTR ERV1 1210 1423 -3513 1320 189 19 71 chr2 233336169 233336491 -19920092 - AluJo SINE Alu -7 305 1 3903 180 41 9 chr2 233336744 233337554 -19919029 - L1MB2 LINE L1 0 6171 5336 1734 177 17 42 chr2 233337797 233338153 -19918430 + MER7A DNA MER2_type 1 345 -1 1580 155 0 97 chr2 233338190 233338519 -19918064 - AluJo SINE Alu -15 297 1 23 33 0 0 chr2 233339549 233339579 -19917004 + AT_rich Low_complexity Low_complexity 1 30 0 204 67 0 0 chr2 233340375 233340405 -19916178 + (A)n Simple_repeat Simple_repeat 1 30 0 579 164 19 19 chr2 233343666 233343770 -19912813 - Charlie1 DNA MER1_type 0 2761 2658 2289 107 7 0 chr2 233344558 233344868 -19911715 - AluSx SINE Alu 0 312 1 392 304 7 14 chr2 233345008 233345156 -19911427 + L1ME LINE L1 5593 5739 -382 2361 122 39 28 chr2 233345979 233346339 -19910244 + THE1B LTR MaLR 1 364 0 1942 172 78 8 chr2 233346821 233347182 -19909401 + MLT1B LTR MaLR 5 390 0 410 276 44 65 chr2 233347207 233347410 -19909173 - L1ME4a LINE L1 -224 5897 5700 213 39 0 0 chr2 233347537 233347563 -19909020 + (TG)n Simple_repeat Simple_repeat 2 27 0 1520 164 131 0 chr2 233347821 233347972 -19908611 - AluJo SINE Alu -2 310 180 194 61 0 30 chr2 233347972 233348005 -19908578 + (TTAA)n Simple_repeat Simple_repeat 4 35 0 1520 164 131 0 chr2 233348005 233348127 -19908456 - AluJo SINE Alu -132 180 1 1152 163 28 28 chr2 233348871 233349086 -19907497 - THE1C LTR MaLR -160 215 1 708 135 156 0 chr2 233349089 233349230 -19907353 - L1ME2 LINE L1 -208 5956 5794 239 271 17 0 chr2 233349961 233350020 -19906563 + L2 LINE L2 3252 3311 -2 265 194 29 97 chr2 233350543 233350646 -19905937 + LTR67 LTR ERVL 459 554 -3 393 334 115 15 chr2 233351823 233352161 -19904422 + L2 LINE L2 2580 2951 -363 490 204 102 0 chr2 233352309 233352446 -19904137 - MER33 DNA MER1_type 0 363 213 1445 234 84 42 chr2 233352450 233352705 -19903878 - MLT2B1 LTR ERVL 0 520 277 1588 189 108 47 chr2 233352705 233353049 -19903534 + MLT1A1 LTR MaLR 1 365 0 1445 234 84 42 chr2 233353049 233353292 -19903291 - MLT2B1 LTR ERVL -243 277 1 763 184 36 30 chr2 233353292 233353460 -19903123 - MER33 DNA MER1_type -149 175 7 244 377 107 0 chr2 233353488 233353610 -19902973 + L2 LINE L2 3138 3272 0 1743 182 0 7 chr2 233354990 233355281 -19901302 + AluJo SINE Alu 1 289 -23 33963 51 2 0 chr2 233355606 233359776 -19896807 + L1P LINE L1 716 4891 -1255 769 133 139 38 chr2 233359876 233360034 -19896549 + THE1C LTR MaLR 202 375 0 279 244 26 96 chr2 233360044 233360159 -19896424 + L1ME2 LINE L1 5965 6071 -93 235 208 21 0 chr2 233360157 233360205 -19896378 + L1ME3 LINE L1 6113 6161 -1 * 530 247 134 27 chr2 233360304 233360527 -19896056 + MIR SINE MIR 6 252 -10 1746 146 11 25 chr2 233360643 233360918 -19895665 + AluJb SINE Alu 9 279 -33 185 0 40 0 chr2 233360920 233360945 -19895638 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 186 279 0 33 chr2 233361000 233361061 -19895522 + L2 LINE L2 2997 3055 -217 31 44 0 0 chr2 233361140 233361185 -19895398 + AT_rich Low_complexity Low_complexity 1 45 0 468 325 33 24 chr2 233361406 233361618 -19894965 + MIR SINE MIR 49 262 0 1961 127 0 0 chr2 233361833 233362108 -19894475 + AluSq SINE Alu 37 311 -2 272 261 42 42 chr2 233362252 233362371 -19894212 - MIR SINE MIR -112 150 32 2168 90 0 35 chr2 233362790 233363101 -19893482 + AluY SINE Alu 1 300 -11 261 139 0 0 chr2 233363229 233363272 -19893311 + (CA)n Simple_repeat Simple_repeat 2 44 0 243 0 0 0 chr2 233366169 233366196 -19890387 + (TG)n Simple_repeat Simple_repeat 2 28 0 3288 247 85 40 chr2 233367125 233368103 -19888480 + L1MDb LINE L1 782 1823 -4583 2287 106 3 3 chr2 233368103 233368415 -19888168 + AluSq SINE Alu 1 312 -1 3288 247 85 40 chr2 233368415 233369186 -19887397 + L1MDb LINE L1 1823 2558 -3848 316 327 28 57 chr2 233369188 233369344 -19887239 + L1 LINE L1 4158 4317 -1829 2106 128 0 0 chr2 233369344 233369625 -19886958 + AluSx SINE Alu 1 281 -31 234 0 0 0 chr2 233369628 233369654 -19886929 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 316 327 28 57 chr2 233369654 233369704 -19886879 + L1 LINE L1 4319 4362 -1784 456 99 14 0 chr2 233369758 233369829 -19886754 - L1PB2 LINE L1 0 6151 6080 2234 100 64 25 chr2 233370062 233370423 -19886160 - THE1C LTR MaLR 0 375 1 304 259 24 0 chr2 233371826 233371911 -19884672 + L2 LINE L2 3225 3311 -2 281 374 23 47 chr2 233373870 233374041 -19882542 - L2 LINE L2 -213 3059 2893 228 353 33 76 chr2 233374170 233374223 -19882360 - L2 LINE L2 -573 2741 2687 1927 157 0 0 chr2 233374223 233374503 -19882080 + AluSx SINE Alu 1 280 -32 183 42 0 0 chr2 233374503 233374527 -19882056 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 228 353 33 76 chr2 233374527 233374656 -19881927 - L2 LINE L2 -625 2689 2566 750 163 78 0 chr2 233374964 233375093 -19881490 + MLT1A1 LTR MaLR 1 139 -226 2205 107 70 53 chr2 233375094 233375450 -19881133 + THE1B LTR MaLR 3 364 0 12524 94 4 4 chr2 233375450 233377030 -19879553 + THE1A-int LTR MaLR 1 1580 0 2765 83 20 3 chr2 233377030 233377379 -19879204 + THE1A LTR MaLR 1 355 0 2235 105 35 62 chr2 233378263 233378301 -19878282 - THE1B LTR MaLR -4 360 322 2240 93 23 0 chr2 233378301 233378601 -19877982 + AluSp SINE Alu 2 308 -5 2235 105 35 62 chr2 233378601 233378932 -19877651 - THE1B LTR MaLR -42 322 1 1630 204 10 3 chr2 233379763 233380057 -19876526 + AluJb SINE Alu 1 296 -16 229 319 64 14 chr2 233380414 233380555 -19876028 + L2 LINE L2 2911 3058 -214 600 233 32 64 chr2 233380595 233380909 -19875674 - HAL1 LINE L1 -1208 1299 996 22 35 0 0 chr2 233382817 233382846 -19873737 + AT_rich Low_complexity Low_complexity 1 29 0 405 0 0 0 chr2 233382848 233382893 -19873690 + (TA)n Simple_repeat Simple_repeat 1 45 0 344 22 22 0 chr2 233382940 233382985 -19873598 + (TCTA)n Simple_repeat Simple_repeat 3 48 0 3384 165 19 21 chr2 233383000 233383377 -19873206 - L1MB4 LINE L1 -9 6171 5792 1789 164 4 7 chr2 233383377 233383685 -19872898 + AluJb SINE Alu 3 309 0 3384 165 19 21 chr2 233383685 233383930 -19872653 - L1MB4 LINE L1 -388 5792 5548 263 246 0 0 chr2 233383930 233383987 -19872596 - MIR SINE MIR -129 133 77 2249 254 100 11 chr2 233384864 233385566 -19871017 - L2 LINE L2 -574 2740 1977 895 240 20 20 chr2 233385569 233385773 -19870810 - MER20 DNA MER1_type -15 204 1 210 191 0 0 chr2 233386372 233386419 -19870164 + (CA)n Simple_repeat Simple_repeat 2 48 0 21 0 0 0 chr2 233386439 233386460 -19870123 + AT_rich Low_complexity Low_complexity 1 21 0 288 335 104 12 chr2 233386884 233387048 -19869535 - MER5B DNA MER1_type 0 178 11 2182 133 0 0 chr2 233387144 233387444 -19869139 - AluSg SINE Alu -10 300 1 795 278 47 20 chr2 233388290 233388545 -19868038 - MIR SINE MIR 0 262 1 192 193 34 102 chr2 233389463 233389494 -19867089 - L2 LINE L2 -57 3256 3224 2092 142 0 0 chr2 233389494 233389789 -19866794 - AluJb SINE Alu -17 295 1 192 193 34 102 chr2 233389789 233389845 -19866738 - L2 LINE L2 -89 3224 3175 3808 131 67 0 chr2 233390491 233391086 -19865497 - LTR24C LTR ERV1 0 635 1 1228 247 61 6 chr2 233391326 233391654 -19864929 - L1ME3 LINE L1 -6 6156 5811 228 261 33 11 chr2 233392380 233392472 -19864111 - MIR SINE MIR -71 137 44 1898 132 29 67 chr2 233392807 233393193 -19863390 - L1MA9 LINE L1 -289 6023 5653 495 0 0 0 chr2 233393201 233393256 -19863327 + (CA)n Simple_repeat Simple_repeat 1 55 0 694 188 7 20 chr2 233393256 233393405 -19863178 + L1MA9 LINE L1 6166 6312 0 573 329 47 0 chr2 233395287 233395521 -19861062 + MIR SINE MIR 16 260 -2 370 146 9 118 chr2 233395828 233395870 -19860713 - MER5A DNA MER1_type -83 106 61 2132 131 3 3 chr2 233395870 233396183 -19860400 - AluSp SINE Alu 0 313 1 370 146 9 118 chr2 233396183 233396250 -19860333 - MER5A DNA MER1_type -128 61 9 28 0 0 0 chr2 233396482 233396510 -19860073 + AT_rich Low_complexity Low_complexity 1 28 0 207 88 0 0 chr2 233396511 233396545 -19860038 + (TCTA)n Simple_repeat Simple_repeat 4 37 0 501 113 38 66 chr2 233396547 233396653 -19859930 + LTR8A LTR ERV1 434 536 -191 234 62 0 0 chr2 233396666 233396698 -19859885 + (CA)n Simple_repeat Simple_repeat 2 33 0 2290 190 77 110 chr2 233397440 233398192 -19858391 - LTR8A LTR ERV1 0 727 1 979 237 37 5 chr2 233399910 233400125 -19856458 - MLT1A1 LTR MaLR -7 358 137 1866 128 88 57 chr2 233400128 233400481 -19856102 - THE1B LTR MaLR 0 364 1 947 123 19 7 chr2 233400481 233400537 -19856046 - THE1B-int LTR MaLR 0 1580 1526 2146 142 0 3 chr2 233400537 233400848 -19855735 + AluSg SINE Alu 1 310 0 947 123 19 7 chr2 233400848 233400946 -19855637 - THE1B-int LTR MaLR -54 1526 1424 7424 49 5 0 chr2 233401046 233402236 -19854347 + L1PA5 LINE L1 4959 6152 -2 475 254 74 0 chr2 233402296 233402418 -19854165 - MER5B DNA MER1_type -46 132 2 568 240 41 82 chr2 233402419 233402618 -19853965 + MLT1F1 LTR MaLR 1 160 -370 2548 111 11 3 chr2 233403221 233403582 -19853001 - THE1B LTR MaLR 0 364 1 1787 163 3 20 chr2 233404915 233405215 -19851368 - AluJo SINE Alu -17 295 1 383 301 37 15 chr2 233405424 233405560 -19851023 - MIR SINE MIR 0 262 124 450 173 90 45 chr2 233406184 233406317 -19850266 + MIR SINE MIR 95 233 -29 774 205 70 65 chr2 233406346 233406496 -19850087 - MER20 DNA MER1_type -1 218 64 2113 116 0 3 chr2 233406496 233406806 -19849777 + AluSq SINE Alu 1 309 0 774 205 70 65 chr2 233406806 233406869 -19849714 - MER20 DNA MER1_type -155 64 3 239 277 18 0 chr2 233406871 233406961 -19849622 + (TA)n Simple_repeat Simple_repeat 2 96 -19 2296 160 59 5 chr2 233406961 233407404 -19849179 - MLT1C LTR MaLR 0 467 1 239 277 18 0 chr2 233407404 233407425 -19849158 + (TA)n Simple_repeat Simple_repeat 96 115 0 249 321 65 53 chr2 233407426 233407688 -19848895 - Charlie8 DNA MER1_type -1002 1415 64 319 314 119 0 chr2 233407876 233407994 -19848589 + MER94 DNA DNA 3 134 0 680 159 0 0 chr2 233408173 233408280 -19848303 - AluJb SINE Alu -204 108 2 236 322 6 18 chr2 233409008 233409122 -19847461 - MIR SINE MIR -86 122 10 314 266 113 48 chr2 233409724 233409848 -19846735 + MIR3 SINE MIR 29 160 -48 2279 95 3 3 chr2 233410048 233410343 -19846240 + AluY SINE Alu 1 295 -16 2361 111 0 0 chr2 233411290 233411596 -19844987 - AluSx SINE Alu -6 306 1 251 322 6 18 chr2 233411975 233412089 -19844494 - MIR SINE MIR -86 122 10 557 226 107 6 chr2 233412248 233412407 -19844176 - MLT1J2 LTR MaLR 0 450 276 363 296 62 13 chr2 233412413 233412618 -19843965 - MLT1I LTR MaLR -227 199 1 261 296 0 0 chr2 233412869 233412940 -19843643 + MIR3 SINE MIR 99 169 -39 253 287 308 7 chr2 233413953 233414096 -19842487 + MIR SINE MIR 33 218 -44 2172 161 92 0 chr2 233414116 233414508 -19842075 - MSTA LTR MaLR 0 428 1 438 69 0 0 chr2 233414510 233414568 -19842015 + (TCCA)n Simple_repeat Simple_repeat 4 61 0 1947 136 7 3 chr2 233414913 233415200 -19841383 - AluSx SINE Alu -24 288 1 310 288 0 0 chr2 233416197 233416277 -19840306 + MIR3 SINE MIR 98 177 -31 2567 107 14 16 chr2 233416426 233416791 -19839792 + THE1B LTR MaLR 1 364 0 216 310 55 14 chr2 233417089 233417234 -19839349 + L3 LINE CR1 1250 1400 -177 5744 120 20 3 chr2 233417989 233419340 -19837243 - L1PA16 LINE L1 -9 6157 4787 3433 141 29 83 chr2 233421159 233421890 -19834693 - LTR8 LTR ERV1 0 691 1 265 229 12 36 chr2 233422083 233422166 -19834417 + MIR SINE MIR 72 152 -110 1002 248 8 23 chr2 233422217 233422475 -19834108 - MIR SINE MIR -3 259 6 966 237 52 8 chr2 233422501 233422750 -19833833 + L1M4 LINE L1 3 262 -6280 2033 229 26 40 chr2 233423062 233423563 -19833020 + L1M4 LINE L1 281 774 -5768 3073 9 3 0 chr2 233423568 233423911 -19832672 + L1HS LINE L1 5812 6155 0 183 42 0 0 chr2 233423914 233423938 -19832645 + (A)n Simple_repeat Simple_repeat 1 24 0 890 220 30 25 chr2 233423938 233424138 -19832445 + L1M4 LINE L1 766 966 -5576 4639 188 69 49 chr2 233424142 233424439 -19832144 + L1M4 LINE L1 4647 4937 -1707 2763 79 117 9 chr2 233424439 233424859 -19831724 + MER4C LTR ERV1 1 465 0 4639 188 69 49 chr2 233424859 233425768 -19830815 + L1M4 LINE L1 4937 5877 -767 718 206 6 6 chr2 233426146 233426326 -19830257 + CT-rich Low_complexity Low_complexity 1 180 0 1099 101 0 17 chr2 233426328 233426507 -19830076 + (TTTC)n Simple_repeat Simple_repeat 3 178 0 1823 159 7 0 chr2 233426507 233426784 -19829799 - AluSx SINE Alu -33 279 1 261 244 116 55 chr2 233428015 233428179 -19828404 + MIR SINE MIR 58 231 -31 256 333 0 12 chr2 233428187 233428268 -19828315 - L2 LINE L2 -2 3311 3232 183 244 22 0 chr2 233428407 233428452 -19828131 - MIR SINE MIR -17 245 200 2308 84 50 0 chr2 233428942 233429239 -19827344 + AluSq SINE Alu 1 312 -1 685 185 116 6 chr2 233429650 233429823 -19826760 - MIR SINE MIR -67 195 4 2450 76 0 10 chr2 233430049 233430363 -19826220 - AluY SINE Alu 0 311 1 309 298 35 74 chr2 233430669 233430927 -19825656 + L2 LINE L2 2812 3059 -213 204 237 0 0 chr2 233431075 233431113 -19825470 + T-rich Low_complexity Low_complexity 3 40 0 765 229 6 11 chr2 233431118 233431301 -19825282 + MIR SINE MIR 48 229 -33 219 36 0 0 chr2 233432108 233432136 -19824447 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2133 111 46 32 chr2 233432167 233432537 -19824046 - THE1C LTR MaLR 0 375 1 341 301 48 36 chr2 233432855 233433021 -19823562 + MIR SINE MIR 12 179 -83 1731 206 28 54 chr2 233433105 233433567 -19823016 + L1M4 LINE L1 4759 5208 -938 432 55 0 0 chr2 233434011 233434066 -19822517 + (CTATT)n Simple_repeat Simple_repeat 1 55 0 1605 192 0 4 chr2 233434074 233434350 -19822233 - AluJo SINE Alu -37 275 1 23 0 0 0 chr2 233435699 233435722 -19820861 + AT_rich Low_complexity Low_complexity 1 23 0 242 315 54 36 chr2 233435893 233436004 -19820579 - MIR SINE MIR -66 142 30 186 270 22 45 chr2 233438484 233438573 -19818010 + MIR SINE MIR 17 103 -105 25 53 0 18 chr2 233439029 233439067 -19817516 + AT_rich Low_complexity Low_complexity 1 39 -17 2301 114 0 0 chr2 233439067 233439375 -19817208 - AluSx SINE Alu -4 308 1 25 53 0 18 chr2 233439375 233439393 -19817190 + AT_rich Low_complexity Low_complexity 39 56 0 26 0 0 0 chr2 233439799 233439825 -19816758 + AT_rich Low_complexity Low_complexity 1 26 0 202 270 27 14 chr2 233441603 233441677 -19814906 + MIR SINE MIR 54 128 -80 239 289 0 0 chr2 233442673 233442763 -19813820 + L1MC4 LINE L1 6614 6703 -1339 324 281 22 0 chr2 233442772 233442861 -19813722 + L1MC4 LINE L1 6615 6705 -1337 191 304 36 77 chr2 233442888 233442967 -19813616 - MIR SINE MIR -65 197 116 1129 114 12 0 chr2 233442967 233443133 -19813450 + L1PB1 LINE L1 5976 6143 -8 236 89 0 22 chr2 233443140 233443185 -19813398 + (TAAAA)n Simple_repeat Simple_repeat 2 45 0 191 304 36 77 chr2 233443185 233443291 -19813292 - MIR SINE MIR -152 110 12 205 271 92 0 chr2 233443296 233443409 -19813174 + MIR SINE MIR 33 154 -76 355 339 9 9 chr2 233443964 233444073 -19812510 - MIR3 SINE MIR -18 190 82 2262 94 0 0 chr2 233444076 233444353 -19812230 + AluSq SINE Alu 1 277 -36 726 247 89 32 chr2 233445328 233445416 -19811167 - MIR SINE MIR 0 262 180 2197 110 30 0 chr2 233445416 233445715 -19810868 - AluSx SINE Alu -4 308 1 726 247 89 32 chr2 233445715 233445873 -19810710 - MIR SINE MIR -82 180 2 185 243 63 45 chr2 233445934 233446045 -19810538 + L2 LINE L2 2292 2404 -910 213 235 71 82 chr2 233446592 233446690 -19809893 - L2 LINE L2 0 3313 3217 27 0 0 0 chr2 233446994 233447021 -19809562 + AT_rich Low_complexity Low_complexity 1 27 0 222 342 132 20 chr2 233447327 233447675 -19808908 - L2 LINE L2 -951 2363 1977 234 0 0 0 chr2 233447755 233447781 -19808802 + (TG)n Simple_repeat Simple_repeat 1 26 0 1335 138 102 16 chr2 233447790 233448044 -19808539 - L1PA16 LINE L1 -2 6164 5889 22 56 0 0 chr2 233449243 233449279 -19807304 + AT_rich Low_complexity Low_complexity 1 36 0 204 40 0 0 chr2 233449639 233449664 -19806919 + (CA)n Simple_repeat Simple_repeat 2 26 0 300 279 292 7 chr2 233449978 233450132 -19806451 - MIR SINE MIR -10 252 55 22 56 0 0 chr2 233450907 233450943 -19805640 + AT_rich Low_complexity Low_complexity 1 36 0 245 192 82 14 chr2 233451509 233451582 -19805001 + MIR SINE MIR 184 261 -1 210 319 91 95 chr2 233451901 233452133 -19804450 - L2 LINE L2 -50 3222 2992 225 292 167 0 chr2 233452134 233452206 -19804377 + MIR3 SINE MIR 119 202 -6 288 208 152 32 chr2 233452819 233452843 -19803740 - L1MA10 LINE L1 -2 6332 6309 3228 228 47 10 chr2 233452843 233453625 -19802958 - L1ME1 LINE L1 -31 6135 5325 562 319 20 39 chr2 233453915 233454169 -19802414 + MIR SINE MIR 8 256 -6 296 229 12 36 chr2 233454977 233455060 -19801523 - MIR3 SINE MIR -1 207 127 2189 119 110 0 chr2 233455711 233456039 -19800544 - THE1B LTR MaLR 0 364 1 297 0 0 0 chr2 233456483 233456516 -19800067 + (TG)n Simple_repeat Simple_repeat 1 33 0 742 177 11 80 chr2 233457361 233457536 -19799047 - MER5A DNA MER1_type -26 163 1 351 292 19 39 chr2 233457900 233458054 -19798529 + L2 LINE L2 3163 3313 0 920 289 16 0 chr2 233458296 233458549 -19798034 - MIR SINE MIR 0 262 6 2380 110 0 0 chr2 233459025 233459334 -19797249 - AluSq SINE Alu -4 309 1 210 171 0 0 chr2 233459400 233459435 -19797148 + (TA)n Simple_repeat Simple_repeat 1 35 0 868 177 111 5 chr2 233459629 233459827 -19796756 + MSTA LTR MaLR 10 228 -200 1248 115 105 5 chr2 233459956 233460147 -19796436 + MSTA LTR MaLR 219 428 0 227 315 88 66 chr2 233460348 233460529 -19796054 - MLT1I LTR MaLR 0 409 225 2229 156 13 13 chr2 233460536 233460914 -19795669 + MLT1B LTR MaLR 5 382 -8 2302 169 22 0 chr2 233461189 233461545 -19795038 - THE1B LTR MaLR 0 364 1 223 374 62 31 chr2 233461658 233461853 -19794730 - L3 LINE CR1 -20 1557 1357 2377 74 0 7 chr2 233461981 233462277 -19794306 + AluSg SINE Alu 1 294 -16 22 35 0 0 chr2 233463117 233463146 -19793437 + AT_rich Low_complexity Low_complexity 1 29 0 324 48 0 0 chr2 233463316 233463358 -19793225 + (TG)n Simple_repeat Simple_repeat 2 43 0 762 244 6 17 chr2 233463883 233464059 -19792524 - MER5B DNA MER1_type -3 175 2 783 104 0 0 chr2 233464388 233464503 -19792080 + (TCCC)n Simple_repeat Simple_repeat 4 118 0 6349 117 18 3 chr2 233464578 233465984 -19790599 + L1PA15 LINE L1 4750 6165 0 213 121 0 0 chr2 233466012 233466045 -19790538 + (A)n Simple_repeat Simple_repeat 1 33 0 861 283 12 26 chr2 233466981 233467320 -19789263 + MER20B DNA MER1_type 367 700 -83 1967 138 3 3 chr2 233467352 233467649 -19788934 - AluSx SINE Alu -15 297 1 28 29 0 0 chr2 233467746 233467781 -19788802 + AT_rich Low_complexity Low_complexity 1 35 0 233 322 14 14 chr2 233468240 233468350 -19788233 + MIR SINE MIR 35 145 -63 537 302 12 17 chr2 233468476 233468648 -19787935 + MIR3 SINE MIR 23 193 -15 1105 93 0 7 chr2 233468911 233469050 -19787533 + AluJb SINE Alu 12 149 -163 339 289 99 21 chr2 233469147 233469289 -19787294 + L2 LINE L2 3097 3290 -23 187 293 146 0 chr2 233469418 233469500 -19787083 + MIR SINE MIR 29 122 -140 1141 213 39 12 chr2 233469692 233469946 -19786637 - MLT1B LTR MaLR 0 390 130 862 180 73 0 chr2 233469954 233470104 -19786479 - AluSg/x SINE Alu -18 294 134 2160 117 0 10 chr2 233470104 233470402 -19786181 - AluSg SINE Alu -15 295 1 357 268 73 0 chr2 233470409 233470532 -19786051 - MLT1B LTR MaLR -258 132 1 218 162 0 0 chr2 233471153 233471190 -19785393 - L2 LINE L2 -13 3259 3223 192 263 147 21 chr2 233471378 233471473 -19785110 - MIR SINE MIR -25 237 131 230 280 53 27 chr2 233474153 233474228 -19782355 - MIR3 SINE MIR -43 165 89 1457 205 138 67 chr2 233474753 233475231 -19781352 - MLT2B1 LTR ERVL 0 520 9 207 233 22 11 chr2 233475231 233475321 -19781262 + A-rich Low_complexity Low_complexity 1 91 0 303 299 71 57 chr2 233476297 233476578 -19780005 + L2 LINE L2 2365 2649 -665 21 57 0 0 chr2 233478497 233478532 -19778051 + AT_rich Low_complexity Low_complexity 1 35 0 621 172 0 0 chr2 233478668 233478761 -19777822 + AluJ/FLAM SINE Alu 2 94 -218 238 230 0 0 chr2 233478793 233478842 -19777741 - MIR SINE MIR -103 105 56 205 290 49 0 chr2 233479839 233479912 -19776671 - MIR SINE MIR -98 110 29 2193 126 10 0 chr2 233480128 233480437 -19776146 - AluSx SINE Alu 0 312 1 886 233 95 23 chr2 233481189 233481536 -19775047 - MER69 DNA AcHobo -11 2515 2144 737 263 16 0 chr2 233481571 233481757 -19774826 - MER69 DNA AcHobo -615 611 423 4334 200 93 15 chr2 233481817 233482809 -19773774 + L1MD2 LINE L1 5099 6197 -162 240 35 0 0 chr2 233482809 233482838 -19773745 + (CA)n Simple_repeat Simple_repeat 2 30 0 4334 200 93 15 chr2 233482838 233483015 -19773568 + L1MD2 LINE L1 6197 6359 0 1261 270 60 26 chr2 233483017 233483398 -19773185 - MER69 DNA AcHobo -2132 394 1 365 324 62 17 chr2 233485178 233485357 -19771226 + MIR3 SINE MIR 17 203 -5 352 260 182 26 chr2 233485384 233485538 -19771045 - MIR SINE MIR -6 256 79 447 241 59 74 chr2 233485542 233485750 -19770833 - MLT1K LTR MaLR -2 586 376 578 239 0 0 chr2 233485750 233485859 -19770724 + MER81 DNA DNA 3 111 -3 447 241 59 74 chr2 233485859 233486026 -19770557 - MLT1K LTR MaLR -212 376 158 195 211 79 0 chr2 233486145 233486183 -19770400 - MIR SINE MIR -181 81 41 392 311 73 37 chr2 233487053 233487217 -19769366 + MLT1K LTR MaLR 2 171 -417 1634 190 164 19 chr2 233487218 233487645 -19768938 - LTR54B LTR ERV1 -2 496 8 694 297 214 12 chr2 233487655 233487982 -19768601 + MLT1K LTR MaLR 194 586 -2 330 331 39 8 chr2 233489141 233489268 -19767315 + MLT1J LTR MaLR 103 233 -278 765 211 100 27 chr2 233489521 233489782 -19766801 - MER113 DNA MER1_type? -181 340 61 283 70 0 0 chr2 233489916 233489959 -19766624 + Alu SINE Alu 260 302 0 4558 182 34 12 chr2 233490078 233491068 -19765515 - L1MB7 LINE L1 0 6184 5174 234 105 0 0 chr2 233491112 233491150 -19765433 + (TCCA)n Simple_repeat Simple_repeat 4 41 0 2479 78 13 0 chr2 233491619 233491928 -19764655 + AluSq SINE Alu 1 313 0 2307 153 34 13 chr2 233493221 233493608 -19762975 + MLT2C1 LTR ERVL 3 397 0 530 221 44 0 chr2 233493634 233493747 -19762836 + L2 LINE L2 3195 3312 -1 266 247 183 48 chr2 233493944 233494130 -19762453 + MLT1L LTR MaLR 169 379 -236 288 53 0 0 chr2 233494228 233494266 -19762317 + (TG)n Simple_repeat Simple_repeat 1 38 0 242 276 26 0 chr2 233494291 233494367 -19762216 + MLT1L LTR MaLR 532 609 -6 1266 133 49 58 chr2 233494727 233494953 -19761630 - AluSg/x SINE Alu -2 310 87 2060 234 28 16 chr2 233495105 233495614 -19760969 - LTR40a LTR ERVL 0 519 5 443 303 35 0 chr2 233495887 233496029 -19760554 - MIR SINE MIR -6 256 110 1663 174 48 54 chr2 233496422 233496814 -19759769 - MLT1B LTR MaLR 0 390 1 1764 262 45 25 chr2 233497045 233497572 -19759011 - MLT1E LTR MaLR -5 588 51 193 271 0 0 chr2 233498262 233498310 -19758273 - MIR SINE MIR -189 73 26 2460 77 0 10 chr2 233498892 233499203 -19757380 + AluSc SINE Alu 1 308 -1 305 253 63 0 chr2 233500194 233500273 -19756310 + MIR SINE MIR 99 182 -80 353 329 58 34 chr2 233500395 233500602 -19755981 + MIR SINE MIR 10 221 -41 404 246 109 0 chr2 233501188 233501298 -19755285 - L2 LINE L2 0 3313 3192 331 322 40 27 chr2 233502034 233502183 -19754400 - L2 LINE L2 -1 3271 3121 200 222 0 0 chr2 233503200 233503245 -19753338 + A-rich Low_complexity Low_complexity 1 45 0 2631 147 15 50 chr2 233504444 233504987 -19751596 - L1MA8 LINE L1 -281 6010 5487 564 129 40 24 chr2 233504981 233505105 -19751478 + L1 LINE L1 4198 4323 -1823 * 735 159 55 55 chr2 233505397 233505560 -19751023 - MER5B DNA MER1_type -12 166 4 316 244 0 24 chr2 233505582 233505664 -19750919 + MIR SINE MIR 183 262 0 2120 144 0 0 chr2 233506477 233506776 -19749807 + AluSx SINE Alu 1 299 -13 265 305 67 29 chr2 233507483 233507588 -19748995 + MIR SINE MIR 26 134 -74 559 296 102 33 chr2 233507645 233507949 -19748634 + MLT1I LTR MaLR 85 409 0 215 236 18 18 chr2 233508372 233508427 -19748156 + CT-rich Low_complexity Low_complexity 3 57 0 297 222 16 0 chr2 233508775 233508838 -19747745 - L2 LINE L2 0 3313 3250 935 262 49 13 chr2 233508987 233509292 -19747291 - LTR16A LTR ERVL 0 450 135 203 265 0 0 chr2 233510152 233510201 -19746382 - L2 LINE L2 0 3313 3265 3839 109 26 21 chr2 233510849 233511280 -19745303 - MER41B LTR ERV1 -7 628 192 2155 102 0 36 chr2 233511280 233511585 -19744998 - AluSx SINE Alu -14 298 5 3839 109 26 21 chr2 233511585 233511778 -19744805 - MER41B LTR ERV1 -443 192 1 257 233 57 113 chr2 233512349 233512508 -19744075 - MIR3 SINE MIR -58 150 1 210 127 48 63 chr2 233516187 233516250 -19740333 + MIR SINE MIR 86 147 -115 714 140 35 7 chr2 233516253 233516396 -19740187 + L1 LINE L1 4741 4887 -1259 255 264 107 60 chr2 233516423 233516639 -19739944 + L1ME LINE L1 1447 1672 -4724 21 0 0 0 chr2 233516763 233516784 -19739799 + AT_rich Low_complexity Low_complexity 1 21 0 974 298 119 42 chr2 233517062 233518163 -19738420 + L1ME LINE L1 3996 5224 -991 449 220 77 92 chr2 233518237 233518426 -19738157 + L1ME LINE L1 5342 5525 -706 1108 135 48 0 chr2 233518426 233518634 -19737949 + L1MA9 LINE L1 6093 6310 -2 449 220 77 92 chr2 233518634 233518771 -19737812 + L1ME LINE L1 5525 5663 -568 7679 23 0 1 chr2 233518808 233519900 -19736683 + L1PA4 LINE L1 5062 6152 -3 432 21 62 31 chr2 233519907 233520004 -19736579 + (TAA)n Simple_repeat Simple_repeat 3 102 0 1294 238 58 62 chr2 233520738 233521256 -19735327 + MLT2B1 LTR ERVL 3 518 -2 732 274 59 22 chr2 233521259 233521690 -19734893 + L1ME3 LINE L1 5393 5860 -306 198 0 0 0 chr2 233522143 233522165 -19734418 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 2001 142 0 0 chr2 233522167 233522448 -19734135 - AluSx SINE Alu -31 281 1 222 156 0 22 chr2 233522677 233522722 -19733861 + CT-rich Low_complexity Low_complexity 4 47 0 627 304 117 29 chr2 233522741 233523296 -19733287 - L1M4 LINE L1 -2496 3650 3047 326 187 67 22 chr2 233524615 233524749 -19731834 + (TTATA)n Simple_repeat Simple_repeat 3 142 0 524 349 51 14 chr2 233524863 233525078 -19731505 - MIR SINE MIR -19 243 21 261 238 48 0 chr2 233525689 233525752 -19730831 + L2 LINE L2 3245 3310 -3 1181 84 0 0 chr2 233527513 233527656 -19728927 + AluSp/q SINE Alu 154 296 -17 21 71 0 0 chr2 233527697 233527739 -19728844 + AT_rich Low_complexity Low_complexity 1 42 0 551 218 24 60 chr2 233527754 233528002 -19728581 - HAL1 LINE L1 -24 2483 2245 318 341 8 0 chr2 233528480 233528612 -19727971 - HAL1 LINE L1 -1602 905 773 464 237 42 116 chr2 233528801 233528991 -19727592 + MIR SINE MIR 12 187 -75 2099 133 0 3 chr2 233530018 233530319 -19726264 + AluSx SINE Alu 1 300 -12 25 31 0 0 chr2 233530365 233530397 -19726186 + AT_rich Low_complexity Low_complexity 1 32 0 209 215 0 15 chr2 233530923 233530988 -19725595 + (TTATA)n Simple_repeat Simple_repeat 4 67 0 232 392 100 0 chr2 233531276 233531406 -19725177 + L2 LINE L2 3122 3264 -8 279 285 62 31 chr2 233532798 233532928 -19723655 + MIR3 SINE MIR 3 136 -72 3874 43 2 12 chr2 233533106 233533597 -19722986 + L1PA7 LINE L1 5668 6153 -1 326 299 189 24 chr2 233534161 233534325 -19722258 + L2 LINE L2 3078 3268 -4 459 0 0 0 chr2 233534325 233534376 -19722207 + (GGAA)n Simple_repeat Simple_repeat 2 52 0 200 86 29 0 chr2 233534967 233535002 -19721581 + (TTTTTG)n Simple_repeat Simple_repeat 2 37 0 414 292 40 70 chr2 233535865 233535876 -19720707 + MLT1K LTR MaLR 321 331 -257 2055 172 13 18 chr2 233535876 233536266 -19720317 - MLT1B LTR MaLR 0 390 3 414 292 40 70 chr2 233536266 233536524 -19720059 + MLT1K LTR MaLR 331 558 -30 501 95 0 0 chr2 233536670 233536744 -19719839 + L1PB4 LINE L1 5712 5785 -371 2182 181 24 2 chr2 233536744 233537150 -19719433 + L1PB4 LINE L1 5725 6152 -4 2540 126 0 5 chr2 233537165 233537555 -19719028 + L1PB4 LINE L1 5769 6156 0 1229 219 65 31 chr2 233537587 233537970 -19718613 - HsTC2 DNA Tc2 -16 1882 1311 803 172 15 0 chr2 233538144 233538278 -19718305 - AluSg/x SINE Alu -20 292 157 22 0 0 0 chr2 233538337 233538359 -19718224 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr2 233539000 233539029 -19717554 + AT_rich Low_complexity Low_complexity 1 29 0 473 259 22 7 chr2 233539993 233540128 -19716455 + MIR SINE MIR 19 155 -107 700 239 35 18 chr2 233540282 233540550 -19716033 + LTR16C LTR ERVL 159 491 0 397 333 74 0 chr2 233541327 233541489 -19715094 + MIR SINE MIR 7 180 -82 216 141 0 47 chr2 233542033 233542097 -19714486 + (TTTTC)n Simple_repeat Simple_repeat 5 65 0 492 143 0 0 chr2 233542119 233542203 -19714380 + (TC)n Simple_repeat Simple_repeat 2 85 0 2192 114 16 3 chr2 233542289 233542595 -19713988 + AluSx SINE Alu 3 312 0 366 331 25 8 chr2 233543556 233543677 -19712906 + MER5B DNA MER1_type 56 178 0 468 253 158 25 chr2 233543962 233544120 -19712463 + MER5A DNA MER1_type 11 189 0 589 252 42 84 chr2 233544306 233544371 -19712212 - MIR SINE MIR -11 251 185 2045 132 4 0 chr2 233544371 233544690 -19711893 + AluSx SINE Alu 1 320 0 589 252 42 84 chr2 233544690 233544837 -19711746 - MIR SINE MIR -77 185 47 534 227 129 15 chr2 233545284 233545416 -19711167 + MIR SINE MIR 5 151 -111 2188 68 4 0 chr2 233545527 233545792 -19710791 - AluSc SINE Alu -28 281 16 228 67 0 0 chr2 233546581 233546611 -19709972 + (TC)n Simple_repeat Simple_repeat 1 30 0 2183 122 7 0 chr2 233546611 233546907 -19709676 - AluSx SINE Alu -14 298 1 3845 59 9 0 chr2 233547013 233547817 -19708766 - L1P3 LINE L1 -430 5724 4916 256 350 65 23 chr2 233548109 233548323 -19708260 - L2 LINE L2 -707 2607 2385 4121 98 17 0 chr2 233548337 233548880 -19707703 + MER41A LTR ERV1 1 552 -2 388 248 108 23 chr2 233549586 233549715 -19706868 + Charlie8 DNA MER1_type 7 146 -2271 728 247 12 12 chr2 233549796 233549966 -19706617 + MIR SINE MIR 7 176 -86 22 56 0 0 chr2 233549980 233550016 -19706567 + AT_rich Low_complexity Low_complexity 1 36 0 2775 82 119 10 chr2 233550166 233550570 -19706013 + LTR7 LTR ERV1 1 448 -2 25538 82 67 34 chr2 233550572 233554228 -19702355 + HERVH LTR ERV1 1 3536 -4177 6603 89 5 2 chr2 233554228 233555081 -19701502 - LTR5 LTR ERVK 0 969 115 498 71 43 0 chr2 233555081 233555151 -19701432 - LTR5 LTR ERVK -896 73 1 25538 82 67 34 chr2 233555151 233555291 -19701292 + HERVH LTR ERV1 3535 3993 -3720 4591 128 0 1 chr2 233555293 233555956 -19700627 + HERVH LTR ERV1 4488 5149 -2564 1453 125 19 0 chr2 233555957 233556173 -19700410 + HERVH LTR ERV1 5600 5819 -1894 2336 104 50 13 chr2 233556173 233556549 -19700034 + HERVH LTR ERV1 7324 7713 0 1989 77 32 9 chr2 233556549 233556892 -19699691 + LTR7 LTR ERV1 1 440 -10 200 278 93 0 chr2 233557171 233557225 -19699358 - MER5A DNA MER1_type -121 68 10 4077 157 12 32 chr2 233557302 233558023 -19698560 + MER50 LTR ERV1 5 711 -23 448 219 16 41 chr2 233559141 233559264 -19697319 - L1ME3A LINE L1 -9 6161 6042 562 290 42 9 chr2 233559270 233559487 -19697096 - L1ME3A LINE L1 -174 5996 5773 2329 116 0 0 chr2 233559495 233559805 -19696778 - AluSx SINE Alu -2 310 1 1190 263 49 30 chr2 233559807 233560437 -19696146 - L1ME3A LINE L1 -720 5444 4853 314 246 187 15 chr2 233560738 233560872 -19695711 + L2 LINE L2 3153 3309 -4 2896 86 29 13 chr2 233561078 233561463 -19695120 - L1PA11 LINE L1 -5 6169 5779 203 288 50 25 chr2 233561516 233561596 -19694987 + L2 LINE L2 2584 2665 -649 244 332 195 11 chr2 233563136 233563326 -19693257 - L3 LINE CR1 -3 1574 1350 222 91 0 0 chr2 233563454 233563487 -19693096 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 499 224 19 9 chr2 233563608 233563715 -19692868 + L2 LINE L2 3206 3313 0 8580 132 13 23 chr2 233564469 233565780 -19690803 - HSMAR2 DNA Mariner -2 1300 3 2950 286 164 27 chr2 233565983 233567193 -19689390 + L2 LINE L2 1290 2817 -496 2022 18 0 0 chr2 233567193 233567479 -19689104 + L1PA2 LINE L1 5924 6209 0 2950 286 164 27 chr2 233567479 233567976 -19688607 + L2 LINE L2 2817 3245 -68 833 296 81 43 chr2 233568198 233568569 -19688014 + MLT1J LTR MaLR 16 400 -111 2067 103 130 17 chr2 233568838 233569139 -19687444 - MER1B DNA MER1_type -2 335 1 2384 98 0 0 chr2 233571181 233571488 -19685095 - AluSc SINE Alu -2 307 1 303 133 0 0 chr2 233572490 233572535 -19684048 + MADE1 DNA Mariner 1 45 -35 428 323 73 12 chr2 233572548 233572712 -19683871 + MIR SINE MIR 19 192 -70 1604 205 26 0 chr2 233572755 233573057 -19683526 - AluJb SINE Alu -2 310 1 4114 36 4 2 chr2 233573073 233573541 -19683042 + L1PA4 LINE L1 5685 6153 -2 21 0 0 0 chr2 233573751 233573772 -19682811 + AT_rich Low_complexity Low_complexity 1 21 0 1990 156 40 30 chr2 233574061 233574432 -19682151 + THE1C LTR MaLR 1 375 0 847 227 94 92 chr2 233574700 233574750 -19681833 - MLT1C LTR MaLR -3 464 416 1947 151 3 0 chr2 233574750 233575063 -19681520 + AluJb SINE Alu 1 314 0 847 227 94 92 chr2 233575063 233575467 -19681116 - MLT1C LTR MaLR -51 416 6 825 147 16 0 chr2 233575717 233575846 -19680737 - MLT1B LTR MaLR 0 390 260 3918 41 2 11 chr2 233575868 233576329 -19680254 - L1PA5 LINE L1 0 6154 5698 1501 158 11 33 chr2 233576329 233576497 -19680086 - MLT1B LTR MaLR -119 271 110 5311 99 0 17 chr2 233576497 233577221 -19679362 - L1PA13 LINE L1 -2 6161 5450 1501 158 11 33 chr2 233577221 233577324 -19679259 - MLT1B LTR MaLR -280 110 6 746 189 84 0 chr2 233577330 233577473 -19679110 - MER58B DNA MER1_type -6 335 181 219 200 44 0 chr2 233577627 233577672 -19678911 + (CTTTG)n Simple_repeat Simple_repeat 2 48 0 2228 119 0 3 chr2 233577706 233578009 -19678574 + AluSg SINE Alu 1 302 -8 2744 196 40 8 chr2 233578011 233578532 -19678051 - L1MB2 LINE L1 -9 6162 5625 523 312 184 18 chr2 233579228 233579565 -19677018 - MLT1K LTR MaLR -8 580 188 353 284 67 37 chr2 233579961 233580095 -19676488 - L2 LINE L2 -252 3061 2924 967 282 74 55 chr2 233580161 233580449 -19676134 + L2 LINE L2 2785 3087 -226 2343 96 0 10 chr2 233580449 233580761 -19675822 + AluSg SINE Alu 2 310 0 967 282 74 55 chr2 233580761 233580985 -19675598 + L2 LINE L2 3087 3305 -8 22 35 0 0 chr2 233581351 233581380 -19675203 + AT_rich Low_complexity Low_complexity 1 29 0 189 74 0 0 chr2 233582189 233582216 -19674367 + (TA)n Simple_repeat Simple_repeat 1 27 0 2146 126 0 0 chr2 233582225 233582518 -19674065 - AluSx SINE Alu -19 293 1 1054 249 79 22 chr2 233582525 233582994 -19673589 - HsTC2a DNA Tc2 -195 547 3 31 26 0 0 chr2 233583127 233583165 -19673418 + AT_rich Low_complexity Low_complexity 1 38 0 4325 192 72 0 chr2 233583502 233583720 -19672863 + MER6 DNA MER2_type 1 202 -663 330 115 0 0 chr2 233583720 233583772 -19672811 + (TG)n Simple_repeat Simple_repeat 2 53 0 4325 192 72 0 chr2 233583772 233583880 -19672703 + MER6 DNA MER2_type 202 301 -564 246 32 0 0 chr2 233583880 233583911 -19672672 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 4325 192 72 0 chr2 233583911 233584390 -19672193 + MER6 DNA MER2_type 301 865 0 201 324 59 29 chr2 233585133 233585235 -19671348 - MIR SINE MIR -81 127 23 2214 66 25 0 chr2 233585303 233585589 -19670994 - AluY SINE Alu -15 296 4 986 186 0 6 chr2 233635608 233635819 -19620764 + AluSg/x SINE Alu 109 318 0 3275 120 49 13 chr2 233635819 233636353 -19620230 + L1PA15 LINE L1 5605 6157 -8 1575 144 28 37 chr2 233636355 233636681 -19619902 + L1MC1 LINE L1 5820 6142 -191 1914 190 9 5 chr2 233636781 233637217 -19619366 + L1M2 LINE L1 2559 2995 -3853 481 72 0 108 chr2 233637218 233637301 -19619282 + MADE1 DNA Mariner 1 74 -6 323 85 0 0 chr2 233637304 233637351 -19619232 - MADE1 DNA Mariner -30 50 4 2115 233 23 0 chr2 233637358 233637831 -19618752 + L1M2 LINE L1 2999 3482 -3366 * 4046 34 14 0 chr2 233637823 233638328 -19618255 - L1P LINE L1 -1314 4832 4321 1489 75 19 14 chr2 233638328 233638524 -19618059 + L1PA5 LINE L1 5941 6153 -1 1360 191 14 45 chr2 233638527 233638674 -19617909 + L1M2 LINE L1 3473 3623 -3225 1670 122 0 0 chr2 233638674 233638903 -19617680 + AluSg/x SINE Alu 84 312 0 1360 191 14 45 chr2 233638903 233639111 -19617472 + L1M2 LINE L1 3623 3817 -3031 1324 70 123 44 chr2 233639211 233639438 -19617145 + AluY SINE Alu 62 306 -5 1385 137 12 12 chr2 233639439 233639680 -19616903 + HERVL-A2 LTR ERVL 5414 5654 0 1787 175 60 39 chr2 233639680 233640224 -19616359 + MLT2A2 LTR ERVL 1 554 0 2430 142 34 14 chr2 233641742 233642158 -19614425 - MSTC LTR MaLR -4 424 1 1326 223 184 27 chr2 233642264 233642658 -19613925 + MLT2B2 LTR ERVL 1 474 -41 524 15 15 0 chr2 233642658 233642723 -19613860 + (TCTA)n Simple_repeat Simple_repeat 4 69 0 1326 223 184 27 chr2 233642723 233642773 -19613810 + MLT2B2 LTR ERVL 474 515 0 2394 126 8 5 chr2 233643703 233644077 -19612506 - THE1C LTR MaLR 0 375 1 193 326 0 0 chr2 233644167 233644216 -19612367 - L2 LINE L2 -40 3273 3225 1279 268 159 31 chr2 233644221 233644773 -19611810 - L2 LINE L2 -821 2493 1871 604 279 70 9 chr2 233645169 233645398 -19611185 - L2 LINE L2 -1444 1870 1628 28 48 0 0 chr2 233645611 233645653 -19610930 + AT_rich Low_complexity Low_complexity 1 42 0 7273 180 56 15 chr2 233646356 233648176 -19608407 + L1MA4A LINE L1 2896 4753 -1393 4789 146 21 14 chr2 233648176 233649028 -19607555 + L1MA4A LINE L1 5444 6301 -2 543 125 11 0 chr2 233649197 233649285 -19607298 - L1MC1 LINE L1 -194 6139 6051 324 111 0 0 chr2 233649284 233649329 -19607254 + L1MC1 LINE L1 6147 6191 -142 * 523 268 31 16 chr2 233649340 233649534 -19607049 - L1ME LINE L1 -385 5736 5540 337 270 59 7 chr2 233649556 233649708 -19606875 - L1ME LINE L1 -2330 5478 5319 216 0 0 0 chr2 233649915 233649939 -19606644 + (T)n Simple_repeat Simple_repeat 1 24 0 334 82 41 0 chr2 233650293 233650342 -19606241 - MLT2B1 LTR ERVL 0 520 470 29 28 0 0 chr2 233650359 233650395 -19606188 + AT_rich Low_complexity Low_complexity 1 36 0 1851 201 24 26 chr2 233650399 233650842 -19605741 - MLT2B1 LTR ERVL -30 485 1 189 0 0 0 chr2 233651615 233651636 -19604947 + (A)n Simple_repeat Simple_repeat 1 21 0 343 212 35 0 chr2 233652641 233652726 -19603857 + MER113 DNA MER1_type? 161 248 -273 1408 254 63 14 chr2 233652735 233653176 -19603407 + L1ME3 LINE L1 5691 6153 -9 699 220 91 14 chr2 233653221 233653430 -19603153 + MER113 DNA MER1_type? 241 465 -56 453 274 80 0 chr2 233654284 233654397 -19602186 + L2 LINE L2 3192 3313 0 413 36 18 0 chr2 233655488 233655543 -19601040 + (TTCCC)n Simple_repeat Simple_repeat 5 60 0 259 253 35 82 chr2 233655867 233656037 -19600546 - MER104 DNA Tc2 -17 163 2 994 186 57 5 chr2 233657367 233657561 -19599022 + MER20 DNA MER1_type 16 219 0 268 206 32 0 chr2 233657732 233657795 -19598788 - MIR SINE MIR -15 247 183 5553 147 13 8 chr2 233657796 233658558 -19598025 - MER49 LTR ERV1 0 923 154 1019 136 11 147 chr2 233658558 233658823 -19597760 - MER30 DNA MER1_type -1 229 1 5553 147 13 8 chr2 233658823 233658953 -19597630 - MER49 LTR ERV1 -769 154 26 396 162 162 26 chr2 233659471 233659588 -19596995 - MER104 DNA Tc2 -4 176 44 318 240 135 10 chr2 233659758 233659862 -19596721 + L2 LINE L2 3196 3312 -1 3345 316 90 45 chr2 233660351 233662589 -19593994 - L2 LINE L2 -2 3311 932 1595 293 60 19 chr2 233662589 233663159 -19593424 + MLT1E LTR MaLR 1 593 0 3345 316 90 45 chr2 233663159 233663549 -19593034 - L2 LINE L2 -2381 932 561 317 246 179 84 chr2 233663734 233663811 -19592772 + LTR67 LTR ERVL 244 312 -245 2373 94 0 0 chr2 233663811 233664108 -19592475 + AluSc SINE Alu 1 297 -12 317 246 179 84 chr2 233664108 233664315 -19592268 + LTR67 LTR ERVL 312 555 -2 260 253 48 12 chr2 233664712 233664795 -19591788 + L1ME4a LINE L1 6008 6093 -28 1733 136 7 27 chr2 233664840 233665135 -19591448 - L1PA16 LINE L1 -2 6164 5876 576 111 0 0 chr2 233667647 233667737 -19588846 + (TTCC)n Simple_repeat Simple_repeat 4 93 0 306 335 66 33 chr2 233667991 233668143 -19588440 - HAL1 LINE L1 -924 1583 1427 260 343 75 7 chr2 233670226 233670372 -19586211 + L2 LINE L2 2219 2374 -940 1116 257 113 39 chr2 233670373 233670805 -19585778 + MLT1C LTR MaLR 4 467 0 923 290 123 64 chr2 233670808 233670931 -19585652 + L2 LINE L2 2369 2483 -830 2361 180 20 7 chr2 233670931 233671369 -19585214 + L1PA16 LINE L1 5721 6164 -2 923 290 123 64 chr2 233671369 233671930 -19584653 + L2 LINE L2 2483 3105 -208 1790 135 103 0 chr2 233671930 233672212 -19584371 + AluSx SINE Alu 1 311 -1 923 290 123 64 chr2 233672212 233672429 -19584154 + L2 LINE L2 3105 3308 -5 1597 99 2 5 chr2 233673266 233673512 -19583071 + L1PA16 LINE L1 5687 5936 -230 2357 102 3 0 chr2 233674200 233674505 -19582078 + AluSp SINE Alu 1 306 -7 189 0 0 0 chr2 233674624 233674645 -19581938 + (CTTA)n Simple_repeat Simple_repeat 4 24 0 329 82 33 0 chr2 233674662 233674723 -19581860 + (TCTCTG)n Simple_repeat Simple_repeat 2 64 0 360 0 0 0 chr2 233674907 233674947 -19581636 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 835 66 0 0 chr2 233674949 233675055 -19581528 - L1PA8 LINE L1 -18 6154 6049 699 281 115 53 chr2 233675477 233675876 -19580707 + L3 LINE CR1 1128 1551 -26 1784 144 25 4 chr2 233675927 233676204 -19580379 - AluSx SINE Alu -29 283 1 536 252 150 35 chr2 233676440 233676666 -19579917 + MIR SINE MIR 10 261 -1 288 342 40 44 chr2 233676832 233677060 -19579523 - L2 LINE L2 -179 3093 2867 3094 118 27 0 chr2 233677226 233677668 -19578915 - MER1A DNA MER1_type 0 529 76 26 0 0 0 chr2 233678267 233678293 -19578290 + AT_rich Low_complexity Low_complexity 1 26 0 19598 151 9 12 chr2 233678293 233682705 -19573878 - L1PA11 LINE L1 -1 7611 3216 4702 246 19 17 chr2 233682722 233683830 -19572753 - L1PA11 LINE L1 -6470 1111 2 487 291 98 26 chr2 233684331 233684565 -19572018 + MIR SINE MIR 12 262 0 361 203 0 0 chr2 233685186 233685255 -19571328 + MER94 DNA DNA 3 71 -63 1826 175 20 10 chr2 233685271 233685574 -19571009 - 7SLRNA srpRNA srpRNA -14 306 1 1594 253 47 16 chr2 233686031 233686612 -19569971 + MER114 LTR ERV 46 644 -4 2261 107 13 0 chr2 233688678 233688986 -19567597 - AluSx SINE Alu 0 312 1 773 21 0 10 chr2 233689872 233689968 -19566615 + (GAAA)n Simple_repeat Simple_repeat 2 96 0 779 256 51 5 chr2 233690070 233690337 -19566246 - L1ME1 LINE L1 -1 6165 5884 1510 262 71 32 chr2 233690374 233690936 -19565647 - L1ME3A LINE L1 -28 6560 5977 281 316 41 0 chr2 233691009 233691107 -19565476 - L1ME3A LINE L1 -573 6015 5914 282 267 86 52 chr2 233691116 233691326 -19565257 - L1ME3A LINE L1 -1748 4816 4600 722 214 131 0 chr2 233691399 233691605 -19564978 - L1MA9 LINE L1 0 6312 6080 249 286 19 19 chr2 233691600 233691705 -19564878 - L1ME3A LINE L1 -2060 4504 4400 * 316 308 23 8 chr2 233691800 233691933 -19564650 - L1ME3A LINE L1 -4612 2133 1999 4189 166 68 27 chr2 233691947 233692982 -19563601 - L1MB4 LINE L1 0 6180 5101 416 281 99 33 chr2 233692983 233693619 -19562964 - L1ME LINE L1 -4761 1984 1270 245 122 0 0 chr2 233693778 233693819 -19562764 - L1ME LINE L1 -5070 975 935 17507 127 10 20 chr2 233694017 233696815 -19559768 - L1P LINE L1 -3364 2782 11 1720 260 54 14 chr2 233698414 233698857 -19557726 + MLT1E LTR MaLR 1 461 -132 801 31 0 0 chr2 233699530 233699626 -19556957 + (CAATT)n Simple_repeat Simple_repeat 3 98 0 199 338 12 38 chr2 233699626 233699706 -19556877 - L2 LINE L2 -16 3297 3220 1978 132 42 0 chr2 233699755 233700043 -19556540 - AluSg SINE Alu -10 300 1 534 331 60 28 chr2 233700100 233700518 -19556065 - L2 LINE L2 -194 3119 2686 474 207 83 33 chr2 233701107 233701228 -19555355 - MLT1E LTR MaLR 0 593 467 207 171 0 0 chr2 233701811 233701846 -19554737 + (CA)n Simple_repeat Simple_repeat 2 36 0 1889 169 127 28 chr2 233701972 233702397 -19554186 - MLT1C LTR MaLR 0 467 1 807 29 10 0 chr2 233702599 233702701 -19553882 - L1PA5 LINE L1 0 6154 6052 2222 209 10 42 chr2 233702782 233702974 -19553609 + MLT1D LTR MaLR 1 198 -307 2381 115 0 0 chr2 233702974 233703286 -19553297 + AluSq SINE Alu 1 312 -1 2222 209 10 42 chr2 233703286 233703615 -19552968 + MLT1D LTR MaLR 198 505 0 22 0 0 0 chr2 233703685 233703707 -19552876 + AT_rich Low_complexity Low_complexity 1 22 0 2322 110 0 3 chr2 233703940 233704248 -19552335 - AluSx SINE Alu -5 307 1 25 0 0 0 chr2 233705264 233705289 -19551294 + AT_rich Low_complexity Low_complexity 1 25 0 1420 277 126 13 chr2 233705527 233706251 -19550332 + L2 LINE L2 2403 3189 -124 332 305 119 0 chr2 233706240 233706391 -19550192 + L2 LINE L2 2464 2632 -682 * 24 32 0 0 chr2 233706443 233706474 -19550109 + AT_rich Low_complexity Low_complexity 1 31 0 273 198 32 40 chr2 233706544 233706670 -19549913 + (TTATA)n Simple_repeat Simple_repeat 2 126 0 689 264 6 6 chr2 233706671 233706834 -19549749 + L2 LINE L2 3147 3309 -4 501 311 11 6 chr2 233707453 233707633 -19548950 + MLT1G LTR MaLR 409 589 -1 249 326 10 10 chr2 233707721 233707819 -19548764 + (TATATG)n Simple_repeat Simple_repeat 4 101 0 1922 138 20 64 chr2 233709455 233709845 -19546738 - THE1C LTR MaLR 0 375 3 387 304 56 19 chr2 233709864 233710134 -19546449 - L1ME4a LINE L1 -234 5887 5608 1099 263 63 50 chr2 233710714 233711171 -19545412 - LTR16B LTR ERVL 0 464 2 295 354 55 42 chr2 233711307 233711544 -19545039 + MIR SINE MIR 17 256 -6 219 254 17 17 chr2 233711978 233712037 -19544546 + MER5B DNA MER1_type 100 158 -20 1444 90 146 9 chr2 233712157 233712413 -19544170 - AluSg1 SINE Alu 0 324 40 331 274 59 39 chr2 233714196 233714349 -19542234 - MIR SINE MIR -1 261 106 5584 167 40 13 chr2 233714858 233716523 -19540060 - L1MA4A LINE L1 -1 6302 4584 386 231 47 7 chr2 233716657 233716803 -19539780 - L1MA10 LINE L1 -3 6331 6161 454 227 39 45 chr2 233717244 233717398 -19539185 + L1ME4a LINE L1 5968 6120 -1 21 0 0 0 chr2 233717817 233717838 -19538745 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 233718124 233718145 -19538438 + AT_rich Low_complexity Low_complexity 1 21 0 27 62 0 0 chr2 233719099 233719147 -19537436 + AT_rich Low_complexity Low_complexity 1 48 0 367 283 51 29 chr2 233719390 233719528 -19537055 - MIR SINE MIR -114 148 8 23 0 0 0 chr2 233720011 233720034 -19536549 + AT_rich Low_complexity Low_complexity 1 23 0 2179 154 33 0 chr2 233720387 233720776 -19535807 - MER57A LTR ERV1 0 403 2 1688 192 44 12 chr2 233720986 233721398 -19535185 + LTR56 LTR ERV1 1 425 -20 486 169 0 0 chr2 233721402 233721491 -19535092 + GA-rich Low_complexity Low_complexity 2 90 0 256 278 0 0 chr2 233721491 233721563 -19535020 + A-rich Low_complexity Low_complexity 1 72 0 7402 141 43 11 chr2 233721983 233723221 -19533362 - MER52C LTR ERV1 0 1278 1 852 185 43 25 chr2 233723945 233724107 -19532476 - FRAM SINE Alu -17 159 1 245 286 57 0 chr2 233724107 233724177 -19532406 - L2 LINE L2 -13 3300 3227 278 377 8 15 chr2 233724359 233724489 -19532094 - L3 LINE CR1 -394 1183 1055 1034 234 54 25 chr2 233724489 233724895 -19531688 - Charlie2 DNA MER1_type -17 2845 2428 222 194 0 0 chr2 233724898 233724970 -19531613 + (TA)n Simple_repeat Simple_repeat 1 72 0 29241 114 10 62 chr2 233724970 233731449 -19525134 - L1PA7 LINE L1 -12 6142 13 406 320 51 31 chr2 233731796 233732052 -19524531 - Charlie2 DNA MER1_type -2518 264 4 584 354 85 22 chr2 233732056 233732375 -19524208 - L3 LINE CR1 -508 1069 731 274 300 62 0 chr2 233732580 233732660 -19523923 - L2 LINE L2 0 3272 3188 1772 186 42 35 chr2 233733296 233733841 -19522742 + MLT2A2 LTR ERVL 1 554 0 37057 101 11 4 chr2 233733841 233739226 -19517357 + HERVL-A2 LTR ERVL 1 5424 -230 822 62 0 0 chr2 233739226 233739323 -19517260 + AluY SINE Alu 1 97 -214 1326 102 6 0 chr2 233739423 233739599 -19516984 + AluSg/x SINE Alu 119 295 -15 327 355 19 9 chr2 233739751 233739965 -19516618 - LTR33 LTR ERVL -14 507 292 2052 133 0 23 chr2 233741756 233742064 -19514519 - AluSx SINE Alu -11 301 1 23 0 0 0 chr2 233742990 233743013 -19513570 + AT_rich Low_complexity Low_complexity 1 23 0 739 354 43 12 chr2 233743258 233743586 -19512997 - MLT1K LTR MaLR -220 368 31 2089 127 3 0 chr2 233744295 233744587 -19511996 + AluSx SINE Alu 1 293 -19 183 313 0 78 chr2 233744614 233744678 -19511905 + L2 LINE L2 3214 3272 0 23 33 0 0 chr2 233744839 233744869 -19511714 + AT_rich Low_complexity Low_complexity 1 30 0 1080 279 71 10 chr2 233746373 233746853 -19509730 + MER113 DNA MER1_type? 1 509 -12 1450 94 5 0 chr2 233746882 233747073 -19509510 + L1PA8 LINE L1 5968 6159 -13 233 226 10 147 chr2 233747284 233747386 -19509197 - L2 LINE L2 -1 3271 3184 200 333 24 24 chr2 233747818 233747902 -19508681 - MIR SINE MIR -21 241 158 1738 244 114 14 chr2 233747902 233748455 -19508128 - MLT1E2 LTR MaLR 0 626 19 201 315 45 34 chr2 233748983 233749072 -19507511 + L2 LINE L2 3139 3228 -44 356 212 7 115 chr2 233749101 233749236 -19507347 + MLT1E3 LTR MaLR 461 624 0 1892 157 0 17 chr2 233750443 233750737 -19505846 - AluJo SINE Alu -22 290 2 1996 144 7 0 chr2 233750742 233751033 -19505550 - AluSg SINE Alu -10 300 8 439 147 0 0 chr2 233751683 233751751 -19504832 - tRNA-Lys-AAA tRNA tRNA -4 72 5 1434 199 26 46 chr2 233751827 233752109 -19504474 + AluJb SINE Alu 3 280 -32 8026 32 8 0 chr2 233752109 233753852 -19502731 + L1PA4 LINE L1 4407 6155 0 1434 199 26 46 chr2 233753852 233753875 -19502708 + AluJb SINE Alu 280 302 -10 303 333 0 0 chr2 233754007 233754097 -19502486 - L1MC4 LINE L1 -1339 6703 6614 * 330 284 23 0 chr2 233754023 233754111 -19502472 + L1MC4 LINE L1 6614 6703 -1339 320 165 0 82 chr2 233754145 233754230 -19502353 + MER96B DNA MER1_type? 155 232 -185 695 289 61 0 chr2 233754628 233754874 -19501709 + MIR SINE MIR 2 262 0 265 336 86 8 chr2 233754877 233755005 -19501578 - MIR SINE MIR -73 189 52 3109 171 27 14 chr2 233756066 233756691 -19499892 - L1MB5 LINE L1 0 6174 5542 2173 100 17 0 chr2 233756744 233757035 -19499548 + AluSq SINE Alu 1 296 -17 324 0 0 0 chr2 233757708 233757744 -19498839 + (CA)n Simple_repeat Simple_repeat 2 37 0 2256 110 3 3 chr2 233758093 233758392 -19498191 - AluSg SINE Alu -11 299 1 1143 280 99 23 chr2 233758488 233759069 -19497514 + Charlie2 DNA MER1_type 3 644 -2138 1159 218 99 7 chr2 233759141 233759444 -19497139 + Charlie2a DNA MER1_type 1466 1796 -1066 887 247 89 61 chr2 233759700 233759861 -19496722 + Charlie2a DNA MER1_type 1796 1951 -911 2210 109 0 0 chr2 233759861 233760154 -19496429 - AluSg SINE Alu -17 293 1 887 247 89 61 chr2 233760154 233760454 -19496129 + Charlie2a DNA MER1_type 1951 2270 -592 952 96 0 8 chr2 233760454 233760579 -19496004 + AluSq SINE Alu 1 124 -189 37573 90 7 7 chr2 233760601 233766737 -19489846 + L1PA6 LINE L1 11 6142 -12 1186 106 6 17 chr2 233766741 233766920 -19489663 + AluSq SINE Alu 121 297 -16 822 264 46 11 chr2 233766988 233767336 -19489247 + Charlie2a DNA MER1_type 2304 2663 -199 190 281 140 18 chr2 233767526 233767640 -19488943 - MIR SINE MIR -62 146 19 530 327 34 6 chr2 233767882 233768076 -19488507 + MIR SINE MIR 34 231 -31 306 0 0 0 chr2 233769685 233769719 -19486864 + (TG)n Simple_repeat Simple_repeat 1 34 0 635 287 95 62 chr2 233770045 233770467 -19486116 - LTR33 LTR ERVL -2 519 84 248 254 0 0 chr2 233770718 233770781 -19485802 - MIR SINE MIR -109 153 91 1836 191 3 37 chr2 233771405 233771497 -19485086 + MER2 DNA MER2_type 6 100 -245 2022 136 7 0 chr2 233771497 233771777 -19484806 + AluSx SINE Alu 1 285 -27 297 0 0 0 chr2 233771777 233771810 -19484773 + (CAAT)n Simple_repeat Simple_repeat 4 36 0 2022 136 7 0 chr2 233771810 233771830 -19484753 + AluSx SINE Alu 285 303 -9 1836 191 3 37 chr2 233771830 233772088 -19484495 + MER2 DNA MER2_type 100 344 -1 31 0 0 0 chr2 233773334 233773365 -19483218 + AT_rich Low_complexity Low_complexity 1 31 0 8888 45 2 0 chr2 233773794 233774896 -19481687 - L1PA5 LINE L1 -926 5220 4117 7304 36 5 0 chr2 233774896 233775818 -19480765 + L1PA5 LINE L1 5217 6142 -12 23 0 0 0 chr2 233775818 233775841 -19480742 + AT_rich Low_complexity Low_complexity 1 23 0 13729 197 29 15 chr2 233776702 233777096 -19479487 + L1PB3 LINE L1 754 1141 -5070 2240 85 9 41 chr2 233777096 233777412 -19479171 + AluY SINE Alu 1 306 -5 13729 197 29 15 chr2 233777412 233781815 -19474768 + L1PB3 LINE L1 1141 5672 -539 2175 96 0 3 chr2 233781815 233782128 -19474455 + AluSx SINE Alu 1 312 0 13729 197 29 15 chr2 233782128 233782675 -19473908 + L1PB3 LINE L1 5672 6210 -1 426 293 32 13 chr2 233783454 233783611 -19472972 - MLT1I LTR MaLR 0 409 250 1182 239 29 55 chr2 233783682 233784120 -19472463 - L1MEc LINE L1 -3651 2564 2177 2004 140 31 0 chr2 233784279 233784571 -19472012 + AluSx SINE Alu 1 301 -11 473 295 112 0 chr2 233784667 233784891 -19471692 + L3b LINE CR1 1111 1359 -224 2939 40 0 0 chr2 233785200 233785599 -19470984 - L1P2 LINE L1 -549 5605 5207 3968 33 4 2 chr2 233785599 233786075 -19470508 + L1PA4 LINE L1 5673 6155 0 1758 119 16 4 chr2 233786105 233786356 -19470227 + AluSx SINE Alu 44 297 -15 709 178 22 60 chr2 233786384 233786569 -19470014 + MER53 DNA DNA 9 186 -3 849 251 63 60 chr2 233786965 233787287 -19469296 + MLT1G3 LTR MaLR 6 301 -229 1333 217 106 30 chr2 233787301 233787707 -19468876 + MER31B LTR ERV1 1 437 -29 383 304 139 6 chr2 233787738 233787896 -19468687 + MLT1G3 LTR MaLR 340 518 -24 32 0 0 0 chr2 233788003 233788035 -19468548 + AT_rich Low_complexity Low_complexity 1 32 0 347 346 31 0 chr2 233788212 233788342 -19468241 - MIR SINE MIR -52 210 77 187 282 24 35 chr2 233788663 233788748 -19467835 - MIR SINE MIR -92 116 33 986 187 35 15 chr2 233789040 233789243 -19467340 + MER3 DNA MER1_type 3 209 0 747 205 38 16 chr2 233789578 233789763 -19466820 - MER53 DNA DNA 0 189 1 605 262 32 36 chr2 233789982 233790203 -19466380 - L1ME3A LINE L1 -61 6109 5890 308 309 83 36 chr2 233790499 233790667 -19465916 - L1MEc LINE L1 -5889 316 141 438 256 24 16 chr2 233791780 233791905 -19464678 + L2 LINE L2 3188 3313 0 408 291 30 59 chr2 233791911 233792114 -19464469 - MIR3 SINE MIR -1 207 11 1938 194 14 6 chr2 233792798 233793154 -19463429 + MLT1A1 LTR MaLR 1 359 -6 204 139 28 0 chr2 233793249 233793285 -19463298 + CT-rich Low_complexity Low_complexity 2 38 0 2865 88 19 16 chr2 233793433 233793863 -19462720 + L1MA2 LINE L1 5874 6304 0 402 316 26 26 chr2 233793873 233794025 -19462558 - MIR SINE MIR -83 179 28 381 283 105 0 chr2 233794169 233794321 -19462262 + MIR SINE MIR 91 258 -4 332 279 37 81 chr2 233794983 233795119 -19461464 + L3 LINE CR1 330 459 -1118 625 307 51 67 chr2 233795296 233795729 -19460854 + MLT1J LTR MaLR 83 508 -3 230 341 82 0 chr2 233795967 233796052 -19460531 + L3 LINE CR1 1409 1500 -77 975 136 131 0 chr2 233796058 233796234 -19460349 - MER3 DNA MER1_type -9 200 2 239 106 43 21 chr2 233796249 233796296 -19460287 + MER5A DNA MER1_type 9 56 -133 633 266 114 64 chr2 233796651 233797112 -19459471 - MLT1F LTR MaLR 0 555 70 491 71 0 0 chr2 233797376 233797446 -19459137 + L1PA4 LINE L1 6083 6152 -3 868 228 10 10 chr2 233798961 233799167 -19457416 - LTR37B LTR ERV1 -262 206 1 21 36 0 0 chr2 233799246 233799274 -19457309 + AT_rich Low_complexity Low_complexity 1 28 0 1162 108 0 6 chr2 233799915 233800091 -19456492 - L1PB1 LINE L1 -1 6150 5976 184 267 116 70 chr2 233800561 233800647 -19455936 + L2 LINE L2 3200 3289 -24 1190 130 34 0 chr2 233800736 233800913 -19455670 - AluSc SINE Alu -4 305 123 1031 202 11 73 chr2 233801437 233801724 -19454859 + L1MB8 LINE L1 5837 6105 -73 2806 75 11 8 chr2 233802591 233802965 -19453618 + THE1C LTR MaLR 1 375 0 314 241 9 36 chr2 233803023 233803135 -19453448 + L1ME4a LINE L1 5741 5849 -272 377 269 81 0 chr2 233803156 233803316 -19453267 + L1ME4a LINE L1 5944 6116 -5 1117 171 8 0 chr2 233807260 233807494 -19449089 - L1MA7 LINE L1 0 6291 6056 1335 148 45 8 chr2 233807494 233807738 -19448845 + L1MA7 LINE L1 5798 6050 -241 1198 150 12 81 chr2 233807942 233808188 -19448395 + AluJo SINE Alu 52 280 -32 217 355 0 0 chr2 233808448 233808510 -19448073 + L2 LINE L2 3203 3264 -8 326 339 116 50 chr2 233809047 233809486 -19447097 - L2 LINE L2 -519 2795 2328 759 267 26 59 chr2 233810165 233810468 -19446115 + LOR1-int LTR ERV1 701 993 -3878 573 247 30 20 chr2 233810581 233810605 -19445978 + LOR1-int LTR ERV1 838 860 -926 463 188 59 10 chr2 233810605 233810706 -19445877 + LTR57-int LTR ERVL 646 751 -4592 573 247 30 20 chr2 233810706 233810808 -19445775 + LOR1-int LTR ERV1 860 1224 -562 * 3250 204 54 41 chr2 233810778 233811923 -19444660 + LOR1-int LTR ERV1 1562 2493 -2378 228 67 0 0 chr2 233811933 233811963 -19444620 + (TG)n Simple_repeat Simple_repeat 2 31 0 1795 140 36 14 chr2 233811963 233812241 -19444342 - AluSx SINE Alu -23 289 6 868 213 23 40 chr2 233812306 233812607 -19443976 + LOR1-int LTR ERV1 1746 2041 -6079 215 200 0 59 chr2 233814193 233814278 -19442305 + A-rich Low_complexity Low_complexity 1 80 0 1747 84 0 4 chr2 233814891 233815130 -19441453 + L1PA15 LINE L1 5922 6159 -6 354 277 269 7 chr2 233815191 233815332 -19441251 + MER5B DNA MER1_type 1 178 0 693 272 29 6 chr2 233815717 233815890 -19440693 - MER5B DNA MER1_type -1 177 1 365 209 55 22 chr2 233816206 233816297 -19440286 - L2 LINE L2 0 3272 3179 199 398 0 0 chr2 233816406 233816489 -19440094 - L2 LINE L2 -265 3007 2925 200 329 38 13 chr2 233818041 233818120 -19438463 + MIR SINE MIR 48 128 -134 389 342 48 26 chr2 233818313 233818585 -19437998 + MLT1J LTR MaLR 234 511 0 220 302 170 53 chr2 233818793 233819279 -19437304 + L2 LINE L2 2449 3291 -22 781 258 104 5 chr2 233819282 233819503 -19437080 - MIR SINE MIR -5 257 15 239 203 14 0 chr2 233819700 233819774 -19436809 + (TA)n Simple_repeat Simple_repeat 2 76 0 250 210 0 0 chr2 233819774 233819836 -19436747 - L1MC4 LINE L1 -1339 6703 6642 409 271 8 17 chr2 233820426 233820544 -19436039 - MIR SINE MIR -46 216 100 218 343 126 21 chr2 233821308 233821451 -19435132 + MIR3 SINE MIR 20 177 -31 274 289 77 5 chr2 233822016 233822156 -19434427 - MIR SINE MIR -79 129 35 291 296 10 10 chr2 233822679 233822777 -19433806 + CT-rich Low_complexity Low_complexity 1 98 0 312 304 158 6 chr2 233823127 233823285 -19433298 - MIR3 SINE MIR -6 202 21 2171 128 0 3 chr2 233823361 233823667 -19432916 - AluSq SINE Alu -8 305 1 195 100 0 0 chr2 233824070 233824100 -19432483 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 392 254 148 47 chr2 233824598 233824767 -19431816 - MER5A DNA MER1_type -2 187 2 195 291 70 23 chr2 233824861 233824947 -19431636 - MIR SINE MIR -45 217 128 2375 74 3 0 chr2 233825119 233825418 -19431165 + AluY SINE Alu 1 300 -11 497 340 21 0 chr2 233825419 233825613 -19430970 + MIR SINE MIR 26 223 -39 2541 58 0 0 chr2 233825699 233826010 -19430573 + AluY SINE Alu 1 311 0 21 36 0 0 chr2 233827035 233827063 -19429520 + AT_rich Low_complexity Low_complexity 1 28 0 4018 15 4 0 chr2 233827067 233827528 -19429055 - L1PA2 LINE L1 -5 6150 5688 1391 13 0 0 chr2 233827528 233827683 -19428900 + L1PA2 LINE L1 5529 5683 -472 203 213 0 16 chr2 233827952 233828013 -19428570 + CT-rich Low_complexity Low_complexity 3 62 0 305 314 183 22 chr2 233828092 233828229 -19428354 + MIR3 SINE MIR 29 187 -21 223 277 72 24 chr2 233828512 233828595 -19427988 - L2 LINE L2 0 3313 3227 2534 224 50 50 chr2 233828927 233829174 -19427409 - L1ME2 LINE L1 -9 6549 6303 2401 153 26 12 chr2 233829174 233829593 -19426990 + MSTB LTR MaLR 2 426 0 2534 224 50 50 chr2 233829593 233830104 -19426479 - L1ME2 LINE L1 -255 6303 5788 2144 131 0 0 chr2 233830104 233830401 -19426182 - AluSx SINE Alu -14 298 2 2534 224 50 50 chr2 233830401 233830461 -19426122 - L1ME2 LINE L1 -769 5789 5730 1861 231 111 37 chr2 233830473 233831205 -19425378 - L1ME2 LINE L1 -855 5685 4900 292 342 66 0 chr2 233831229 233831381 -19425202 - L1ME2 LINE L1 -2048 4492 4331 2314 243 87 18 chr2 233831382 233832476 -19424107 - L1ME2 LINE L1 -2892 3648 2499 485 262 75 98 chr2 233832508 233832974 -19423609 - L1ME2 LINE L1 -4210 2511 2065 2554 145 24 5 chr2 233832974 233833394 -19423189 + MSTA LTR MaLR 1 428 0 485 262 75 98 chr2 233833394 233833622 -19422961 - L1ME2 LINE L1 -4656 2065 1833 484 275 14 72 chr2 233833650 233833739 -19422844 - L1ME2 LINE L1 -4975 1565 1472 2018 152 0 0 chr2 233833739 233834036 -19422547 - AluSx SINE Alu -15 297 1 484 275 14 72 chr2 233834036 233834306 -19422277 - L1ME2 LINE L1 -5068 1472 1227 * 4912 102 25 25 chr2 233834294 233835080 -19421503 - L1PB1 LINE L1 -2 6149 5364 2576 84 11 3 chr2 233835088 233835443 -19421140 - L1PB1 LINE L1 0 6151 5794 198 48 24 48 chr2 233835444 233835486 -19421097 + (TA)n Simple_repeat Simple_repeat 2 42 0 3838 167 3 2 chr2 233835532 233836671 -19419912 - L1PB1 LINE L1 -470 5681 4543 249 347 47 36 chr2 233836937 233837130 -19419453 - L2 LINE L2 -647 2667 2473 398 143 13 0 chr2 233837376 233837453 -19419130 + (TAGA)n Simple_repeat Simple_repeat 2 79 0 1043 283 66 23 chr2 233837458 233838185 -19418398 - L1M4 LINE L1 -1015 5131 4367 1101 211 119 22 chr2 233838195 233838555 -19418028 - L1ME2 LINE L1 -9 6155 5761 332 210 17 47 chr2 233838557 233838652 -19417931 - L1ME2 LINE L1 -592 5570 5475 260 259 83 57 chr2 233838658 233838959 -19417624 - L1M4 LINE L1 -1978 4168 3860 2131 113 0 7 chr2 233838975 233839259 -19417324 + AluSx SINE Alu 1 282 -30 255 79 0 0 chr2 233839259 233839297 -19417286 + (TC)n Simple_repeat Simple_repeat 1 38 0 366 247 0 11 chr2 233839297 233839386 -19417197 - L1MC4 LINE L1 -1340 6702 6615 401 161 11 0 chr2 233839387 233839474 -19417109 + (TA)n Simple_repeat Simple_repeat 2 89 0 4746 137 20 24 chr2 233839480 233840261 -19416322 + MER49 LTR ERV1 1 778 -145 642 139 9 52 chr2 233840361 233840476 -19416107 + MER49 LTR ERV1 806 915 -8 1509 270 97 28 chr2 233840492 233840937 -19415646 - L1M4 LINE L1 -2304 3842 3429 2155 149 86 8 chr2 233840937 233841334 -19415249 - MSTA LTR MaLR 0 428 1 1509 270 97 28 chr2 233841334 233841815 -19414768 - L1M4 LINE L1 -2717 3429 2852 10564 210 65 35 chr2 233841861 233842331 -19414252 - L1MC3 LINE L1 -31 7688 7234 199 0 0 61 chr2 233842331 233842364 -19414219 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2026 135 3 0 chr2 233842367 233842656 -19413927 - AluSx SINE Alu -22 290 1 10564 210 65 35 chr2 233842656 233842745 -19413838 - L1MC3 LINE L1 -486 7233 7148 309 297 0 0 chr2 233842745 233842836 -19413747 - MLT1F1 LTR MaLR -442 125 35 10564 210 65 35 chr2 233842836 233843093 -19413490 - L1MC3 LINE L1 -571 7148 6900 2303 106 3 0 chr2 233843093 233843395 -19413188 - AluSp SINE Alu -10 303 1 10564 210 65 35 chr2 233843395 233847916 -19408667 - L1MC3 LINE L1 -819 6900 2089 322 212 111 78 chr2 233849171 233849477 -19407106 - Charlie7 DNA MER1_type -125 2487 2172 1182 240 114 7 chr2 233849480 233849901 -19406682 - Charlie7 DNA MER1_type -606 2006 1541 320 289 106 21 chr2 233849901 233850043 -19406540 - MIR SINE MIR -28 234 81 764 276 67 15 chr2 233850047 233850315 -19406268 - LTR16A1 LTR ERVL 0 457 176 358 273 13 0 chr2 233850482 233850559 -19406024 - MIR SINE MIR -178 84 7 604 252 89 39 chr2 233850566 233850824 -19405759 - Charlie7 DNA MER1_type -1043 1569 1299 9001 222 3 4 chr2 233850975 233853027 -19403556 - L1 LINE L1 -1620 4526 2477 372 297 36 24 chr2 233853032 233853337 -19403246 - L1MC3 LINE L1 -5285 785 526 200 261 31 15 chr2 233853393 233853458 -19403125 - MIR SINE MIR -58 150 85 277 301 0 55 chr2 233853492 233853557 -19403026 + L2 LINE L2 3026 3093 -220 2336 132 22 0 chr2 233853557 233853913 -19402670 + THE1B LTR MaLR 1 364 0 277 301 0 55 chr2 233853913 233853993 -19402590 + L2 LINE L2 3093 3163 -150 800 298 43 14 chr2 233854020 233854440 -19402143 + L1MEc LINE L1 1430 1861 -4535 457 306 40 24 chr2 233854442 233854566 -19402017 + L2 LINE L2 3188 3313 0 305 238 40 10 chr2 233854929 233855030 -19401553 - MER103 DNA DNA -16 150 47 1741 132 11 11 chr2 233856275 233856541 -19400042 + AluSx SINE Alu 1 266 -46 404 271 120 0 chr2 233857623 233857756 -19398827 - L1ME LINE L1 -415 5706 5558 32 57 0 0 chr2 233857803 233857856 -19398727 + AT_rich Low_complexity Low_complexity 1 53 0 543 276 113 5 chr2 233858366 233858551 -19398032 - MIR SINE MIR -38 224 20 2249 86 7 3 chr2 233859426 233859716 -19396867 + AluSq SINE Alu 2 292 -21 2065 129 3 3 chr2 233861276 233861570 -19395013 + AluSq SINE Alu 7 300 -13 207 0 0 0 chr2 233861913 233861936 -19394647 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 374 133 120 0 chr2 233861940 233862015 -19394568 - L1MC2 LINE L1 -13 6331 6248 1223 141 11 0 chr2 233862056 233862247 -19394336 + AluSx SINE Alu 1 193 -119 451 289 129 26 chr2 233863110 233863304 -19393279 - MIR SINE MIR 0 262 49 466 87 72 0 chr2 233863367 233863436 -19393147 + MADE1 DNA Mariner 7 80 0 204 125 0 0 chr2 233863848 233863880 -19392703 + (GAAA)n Simple_repeat Simple_repeat 2 33 0 251 223 86 149 chr2 233864012 233864313 -19392270 + MLT1J1-int LTR MaLR 1057 1338 -33 438 344 56 14 chr2 233864667 233864882 -19391701 + MLT1J1 LTR MaLR 71 294 -152 313 401 118 3 chr2 233865144 233865441 -19391142 + L2 LINE L2 2554 2884 -430 233 333 14 0 chr2 233865498 233865567 -19391016 + L2 LINE L2 3014 3083 -189 23 0 0 0 chr2 233865621 233865644 -19390939 + AT_rich Low_complexity Low_complexity 1 23 0 1242 197 9 0 chr2 233865703 233865931 -19390652 + L1MC1 LINE L1 6103 6332 -1 679 297 93 8 chr2 233866016 233866249 -19390334 - LTR33 LTR ERVL -240 281 28 448 275 11 3 chr2 233866249 233866420 -19390163 - MER58B DNA MER1_type -1 340 1 1357 279 50 14 chr2 233866496 233866997 -19389586 - L1MC/D LINE L1 -2036 5772 5254 1722 117 60 104 chr2 233867283 233867631 -19388952 + THE1C LTR MaLR 3 332 -96 5893 61 1 0 chr2 233867631 233868369 -19388214 + L1PA6 LINE L1 5405 6143 -11 1722 117 60 104 chr2 233868369 233868462 -19388121 + THE1C LTR MaLR 332 428 0 358 324 56 65 chr2 233869028 233869352 -19387231 - L2 LINE L2 -2290 1024 704 339 330 0 0 chr2 233869380 233869468 -19387115 + MIR SINE MIR 62 149 -113 723 181 8 0 chr2 233869686 233869843 -19386740 + AluSg/x SINE Alu 148 305 0 3624 137 19 21 chr2 233869850 233870480 -19386103 - L1PA16 LINE L1 -8 6158 5530 3842 239 43 29 chr2 233870480 233870630 -19385953 - L1MD2 LINE L1 -23 6336 6190 511 78 13 13 chr2 233870630 233870707 -19385876 - MADE1 DNA Mariner 0 80 4 3842 239 43 29 chr2 233870707 233871956 -19384627 - L1MD2 LINE L1 -169 6190 4780 240 35 0 0 chr2 233871956 233871985 -19384598 + (TTCTC)n Simple_repeat Simple_repeat 2 30 0 3842 239 43 29 chr2 233871985 233872629 -19383954 - L1MD2 LINE L1 -1579 4780 4147 2452 77 0 0 chr2 233873130 233873429 -19383154 + AluSq SINE Alu 1 299 -14 521 262 166 9 chr2 233874694 233874923 -19381660 + L2 LINE L2 2222 2486 -828 1015 197 3 1 chr2 233874935 233875263 -19381320 + MER93b LTR ERV1 13 373 0 1468 267 94 31 chr2 233875264 233876042 -19380541 + L2 LINE L2 2486 3306 -7 195 288 36 54 chr2 233876032 233876143 -19380440 + MIR SINE MIR 78 186 -76 * 25 0 0 0 chr2 233876591 233876616 -19379967 + AT_rich Low_complexity Low_complexity 1 25 0 35 0 0 0 chr2 233877262 233877297 -19379286 + AT_rich Low_complexity Low_complexity 1 35 0 1655 179 7 3 chr2 233877299 233877584 -19378999 - AluJo SINE Alu -23 289 4 372 94 0 0 chr2 233877593 233877604 -19378979 + (CA)n Simple_repeat Simple_repeat 1 64 0 372 94 0 0 chr2 233877604 233877657 -19378926 + (CA)n Simple_repeat Simple_repeat 2 54 0 525 105 0 13 chr2 233877677 233877753 -19378830 - AluSg/x SINE Alu -21 289 215 2368 107 9 3 chr2 233877804 233878140 -19378443 + THE1B LTR MaLR 1 338 -26 189 267 17 17 chr2 233879148 233879208 -19377375 - MIR SINE MIR -62 146 87 549 270 33 7 chr2 233880118 233880270 -19376313 - MIR SINE MIR -76 186 31 2067 140 0 13 chr2 233881778 233882092 -19374491 + AluSx SINE Alu 1 310 -2 2290 82 0 0 chr2 233882754 233883046 -19373537 - AluSg SINE Alu -18 292 1 577 308 77 21 chr2 233884829 233885063 -19371520 - MIR SINE MIR -5 257 11 452 82 27 0 chr2 233885069 233885142 -19371441 + (CTATA)n Simple_repeat Simple_repeat 2 76 0 2167 140 15 58 chr2 233885317 233885711 -19370872 + MLT1B LTR MaLR 14 390 0 24 32 0 0 chr2 233885765 233885796 -19370787 + AT_rich Low_complexity Low_complexity 1 31 0 1321 164 85 27 chr2 233886854 233887147 -19369436 + AluJo SINE Alu 1 310 -2 371 301 155 24 chr2 233887179 233887475 -19369108 + L1MC4a LINE L1 5609 5943 -1865 419 335 79 56 chr2 233888658 233889013 -19367570 + MLT1I LTR MaLR 47 409 0 453 314 7 7 chr2 233889204 233889344 -19367239 + MER5A DNA MER1_type 50 189 0 23 68 0 0 chr2 233889850 233889894 -19366689 + AT_rich Low_complexity Low_complexity 1 44 0 366 296 57 82 chr2 233891903 233892308 -19364275 + HAL1 LINE L1 1 395 -2112 237 250 69 43 chr2 233892336 233892452 -19364131 + HAL1 LINE L1 499 617 -1890 26 0 0 0 chr2 233892555 233892581 -19364002 + AT_rich Low_complexity Low_complexity 1 26 0 2599 133 24 9 chr2 233892894 233893314 -19363269 + MSTA LTR MaLR 1 426 -2 8777 173 37 17 chr2 233893316 233893615 -19362968 + MSTA-int LTR MaLR 1 293 -1358 2203 140 48 23 chr2 233893615 233894052 -19362531 + LTR7 LTR ERV1 1 448 -2 8777 173 37 17 chr2 233894052 233895371 -19361212 + MSTA-int LTR MaLR 293 1651 0 2594 138 21 7 chr2 233895373 233895793 -19360790 + MSTA LTR MaLR 3 428 0 2141 198 36 38 chr2 233895943 233896449 -19360134 - MLT1D LTR MaLR 0 505 1 2375 126 22 0 chr2 233896710 233897066 -19359517 + THE1B LTR MaLR 1 364 0 1710 267 64 23 chr2 233897597 233898156 -19358427 - L1ME3A LINE L1 -5 6165 5630 1877 206 67 8 chr2 233898156 233898558 -19358025 - MSTB LTR MaLR 0 426 1 1710 267 64 23 chr2 233898558 233899038 -19357545 - L1ME3A LINE L1 -540 5630 5062 799 145 38 31 chr2 233899283 233899442 -19357141 - L1MA6 LINE L1 0 6300 6141 2663 91 6 3 chr2 233899520 233899883 -19356700 - THE1B LTR MaLR 0 364 1 1242 285 146 15 chr2 233900526 233901006 -19355577 + MLT1H LTR MaLR 1 543 -6 2678 193 10 2 chr2 233902026 233902508 -19354075 - MER66B LTR ERV1 0 486 1 8902 122 53 18 chr2 233902508 233902834 -19353749 - MER66B-int LTR ERV1 0 6676 6363 1599 196 29 0 chr2 233902834 233903110 -19353473 - AluJb SINE Alu 0 312 29 8902 122 53 18 chr2 233903110 233904054 -19352529 - MER66B-int LTR ERV1 -313 6363 5344 2382 140 3 6 chr2 233904054 233904419 -19352164 - THE1B LTR MaLR 0 364 1 8902 122 53 18 chr2 233904419 233904629 -19351954 - MER66B-int LTR ERV1 -1332 5344 5143 4067 211 6 33 chr2 233904625 233905194 -19351389 - MER66B-int LTR ERV1 -3504 3172 2632 * 1872 127 38 14 chr2 233905194 233905485 -19351098 - AluSx SINE Alu -14 298 1 4067 211 6 33 chr2 233905485 233905772 -19350811 - MER66B-int LTR ERV1 -4044 2632 2339 8919 199 43 56 chr2 233905773 233906233 -19350350 - MER66B-int LTR ERV1 -4516 2160 1696 2029 161 0 34 chr2 233906233 233906582 -19350001 + MER1B DNA MER1_type 1 337 0 8919 199 43 56 chr2 233906582 233907557 -19349026 - MER66B-int LTR ERV1 -4980 1696 759 371 0 61 0 chr2 233907557 233907606 -19348977 + (TAAAA)n Simple_repeat Simple_repeat 2 53 0 8919 199 43 56 chr2 233907606 233908356 -19348227 - MER66B-int LTR ERV1 -5917 759 1 2927 160 0 30 chr2 233908356 233908856 -19347727 - MER66B LTR ERV1 0 486 2 251 250 43 103 chr2 233909069 233909185 -19347398 - L2 LINE L2 0 3313 3205 697 47 264 0 chr2 233909292 233909421 -19347162 - MSTA LTR MaLR -265 163 1 528 336 92 9 chr2 233909573 233909999 -19346584 - L1ME LINE L1 -5598 472 12 505 253 84 26 chr2 233910610 233910764 -19345819 + MIR SINE MIR 1 163 -99 236 122 0 24 chr2 233912040 233912081 -19344502 + MLT1E3 LTR MaLR 5 44 -580 1354 205 102 72 chr2 233912141 233912444 -19344139 + MLT1E3 LTR MaLR 142 435 -189 2382 106 49 9 chr2 233912444 233912794 -19343789 + THE1B LTR MaLR 1 364 0 453 50 0 220 chr2 233912795 233912895 -19343688 - MADE1 DNA Mariner 0 80 3 1354 205 102 72 chr2 233912895 233913058 -19343525 + MLT1E3 LTR MaLR 434 624 0 476 263 0 0 chr2 233913341 233913455 -19343128 + MIR SINE MIR 145 258 -4 6277 43 0 0 chr2 233913479 233914230 -19342353 + L1PA5 LINE L1 5404 6154 0 378 265 22 9 chr2 233914261 233914368 -19342215 - MIR SINE MIR -65 143 45 2024 137 0 40 chr2 233914603 233914925 -19341658 + AluSx SINE Alu 1 309 -3 353 192 260 0 chr2 233914932 233915036 -19341547 + MER5A DNA MER1_type 57 187 -2 243 125 0 0 chr2 233915972 233916012 -19340571 + (CA)n Simple_repeat Simple_repeat 1 40 0 2415 70 3 3 chr2 233917481 233917783 -19338800 + AluY SINE Alu 1 302 -9 705 272 176 25 chr2 233917844 233918167 -19338416 + LTR16C LTR ERVL 101 472 -19 255 297 54 0 chr2 233918378 233918452 -19338131 + MIR SINE MIR 149 226 -36 339 301 57 0 chr2 233919559 233919752 -19336831 - L1ME4a LINE L1 -206 5915 5712 186 133 0 0 chr2 233920669 233920699 -19335884 + (A)n Simple_repeat Simple_repeat 1 30 0 345 235 149 50 chr2 233920708 233920918 -19335665 + MIR SINE MIR 13 260 -2 548 323 65 28 chr2 233921156 233921404 -19335179 + MIR SINE MIR 6 262 0 839 298 107 0 chr2 233921961 233922280 -19334303 - MLT1D-int LTR MaLR -469 902 550 1385 62 16 26 chr2 233922298 233922491 -19334092 - L1PA10 LINE L1 -1 6167 5977 1633 62 67 0 chr2 233922491 233922715 -19333868 + L1PA10 LINE L1 5748 5986 -182 806 255 42 16 chr2 233922713 233923082 -19333501 - MLT1D-int LTR MaLR -857 514 19 * 1931 183 20 93 chr2 233923093 233923633 -19332950 - MLT1D LTR MaLR -4 501 1 1957 126 29 16 chr2 233924226 233924502 -19332081 + AluSq SINE Alu 1 283 -30 261 0 0 0 chr2 233924502 233924531 -19332052 + (CA)n Simple_repeat Simple_repeat 2 30 0 1957 126 29 16 chr2 233924531 233924563 -19332020 + AluSq SINE Alu 283 313 0 22 56 0 0 chr2 233926140 233926176 -19330407 + AT_rich Low_complexity Low_complexity 1 36 0 673 261 37 61 chr2 233926962 233927217 -19329366 + L1ME4a LINE L1 5558 5803 -318 2465 70 0 0 chr2 233927217 233927518 -19329065 + AluY SINE Alu 1 301 -10 673 261 37 61 chr2 233927518 233927637 -19328946 + L1ME4a LINE L1 5803 5923 -198 2289 122 13 27 chr2 233927661 233928037 -19328546 + THE1C LTR MaLR 5 375 0 503 312 0 0 chr2 233928133 233928274 -19328309 - LTR16A LTR ERVL -98 352 212 435 19 0 0 chr2 233928277 233928329 -19328254 + (TTG)n Simple_repeat Simple_repeat 2 53 0 1929 122 0 28 chr2 233928331 233928618 -19327965 - AluSg SINE Alu -31 279 1 1048 240 19 8 chr2 233928701 233928968 -19327615 + MLT1A1 LTR MaLR 1 270 -95 310 317 28 0 chr2 233928986 233929128 -19327455 - LTR16A1 LTR ERVL -309 148 3 194 195 0 24 chr2 233931569 233931610 -19324973 + MIR SINE MIR 34 73 -189 723 314 87 19 chr2 233931632 233932011 -19324572 + MLT1J2 LTR MaLR 24 428 -22 426 282 128 0 chr2 233932048 233932204 -19324379 + MIR SINE MIR 87 262 0 759 246 80 13 chr2 233932358 233932582 -19324001 - MIR SINE MIR -17 245 7 687 264 43 0 chr2 233933949 233934112 -19322471 + MIR SINE MIR 81 250 -12 1096 163 74 30 chr2 233934142 233934412 -19322171 + L1MA9 LINE L1 6030 6311 -1 1069 280 120 14 chr2 233934914 233935357 -19321226 - MLT1H LTR MaLR 0 549 60 2450 55 0 0 chr2 233935525 233935833 -19320750 + L1PA6 LINE L1 5847 6154 0 31 26 0 0 chr2 233935833 233935871 -19320712 + AT_rich Low_complexity Low_complexity 1 38 0 295 221 205 9 chr2 233936816 233936932 -19319651 - MIR3 SINE MIR -6 202 69 1802 158 164 3 chr2 233937131 233937497 -19319086 + MSTB LTR MaLR 2 426 0 244 242 0 45 chr2 233937952 233938018 -19318565 + GA-rich Low_complexity Low_complexity 3 65 0 532 16 0 0 chr2 233938981 233939043 -19317540 + L1PA6 LINE L1 6081 6142 -12 3147 165 42 11 chr2 233940495 233941137 -19315446 - L1MB7 LINE L1 0 6184 5523 1327 282 82 5 chr2 233941751 233942152 -19314431 - L2 LINE L2 -1 3312 2881 181 250 42 42 chr2 233942441 233942513 -19314070 - L2 LINE L2 -329 2943 2872 401 314 90 40 chr2 233942914 233943137 -19313446 - HAL1 LINE L1 -2 2505 2272 416 272 37 7 chr2 233943168 233943304 -19313279 - HAL1 LINE L1 -304 2203 2064 310 352 145 44 chr2 233943393 233943711 -19312872 + L2 LINE L2 2918 3267 -5 219 273 13 39 chr2 233943713 233943790 -19312793 + GA-rich Low_complexity Low_complexity 1 75 0 1838 80 0 25 chr2 233943887 233944126 -19312457 + AluSg SINE Alu 64 296 -14 297 288 169 34 chr2 233944658 233944776 -19311807 - MIR3 SINE MIR -54 154 21 2588 113 39 10 chr2 233945556 233945972 -19310611 - MSTA LTR MaLR 0 428 1 905 182 0 0 chr2 233946797 233946940 -19309643 + FLAM_C SINE Alu 1 143 0 27 0 0 0 chr2 233947278 233947305 -19309278 + AT_rich Low_complexity Low_complexity 1 27 0 318 343 0 9 chr2 233947437 233947545 -19309038 - MIR SINE MIR -102 160 54 21 0 0 0 chr2 233948232 233948253 -19308330 + AT_rich Low_complexity Low_complexity 1 21 0 244 347 129 21 chr2 233949509 233949702 -19306881 + L3 LINE CR1 334 547 -1030 523 329 28 4 chr2 233949751 233949967 -19306616 - L2 LINE L2 -12 3260 3081 2186 185 35 22 chr2 233950037 233950544 -19306039 - L1MB7 LINE L1 -1 6183 5670 3495 196 33 58 chr2 233950544 233951324 -19305259 - L1M4 LINE L1 -378 5806 5008 1584 168 0 17 chr2 233951324 233951615 -19304968 - AluJb SINE Alu -18 294 9 3495 196 33 58 chr2 233951615 233951639 -19304944 - L1M4 LINE L1 -1176 5008 4985 2047 115 13 0 chr2 233951639 233951943 -19304640 + AluY SINE Alu 1 308 -3 3495 196 33 58 chr2 233951943 233952783 -19303800 - L1M4 LINE L1 -1199 4985 4211 454 361 26 26 chr2 233952862 233953089 -19303494 + L3 LINE CR1 1284 1510 -67 255 256 39 26 chr2 233953099 233953177 -19303406 + L3 LINE CR1 1482 1560 -17 21 0 0 0 chr2 233954480 233954501 -19302082 + AT_rich Low_complexity Low_complexity 1 21 0 322 336 119 0 chr2 233956217 233956351 -19300232 - MIR3 SINE MIR -9 199 50 224 217 17 33 chr2 233956533 233956593 -19299990 + MIR3 SINE MIR 113 171 -37 380 294 0 0 chr2 233958313 233958415 -19298168 - MIR SINE MIR -12 250 149 2407 57 0 23 chr2 233958419 233958720 -19297863 - AluY SINE Alu -17 294 1 1201 41 0 0 chr2 233958730 233958877 -19297706 - L1PA4 LINE L1 -3 6152 6006 1783 41 0 0 chr2 233958877 233959098 -19297485 + L1PA4 LINE L1 5772 5992 -163 323 169 14 0 chr2 233960078 233960149 -19296434 + LTR43 LTR ERV1 206 277 -325 732 197 20 7 chr2 233960251 233960398 -19296185 + LTR35 LTR ERV1 470 618 0 253 273 58 50 chr2 233960746 233960885 -19295698 + MIR SINE MIR 85 224 -38 3215 204 88 33 chr2 233961221 233961614 -19294969 + MER21B LTR ERV1 1 371 -492 2476 178 225 93 chr2 233961614 233962515 -19294068 + LTR28 LTR ERV1 1 1020 0 3215 204 88 33 chr2 233962515 233962919 -19293664 + MER21B LTR ERV1 371 842 -21 611 244 91 20 chr2 233964140 233964394 -19292189 + MLT1H LTR MaLR 120 391 -158 188 281 171 24 chr2 233964501 233964583 -19292000 - MIR SINE MIR -82 126 33 2030 168 35 3 chr2 233965366 233965742 -19290841 + MLT1B LTR MaLR 3 390 0 496 115 13 0 chr2 233966158 233966236 -19290347 + MADE1 DNA Mariner 2 80 0 283 327 5 38 chr2 233966238 233966383 -19290200 - MIR3 SINE MIR -29 179 39 2295 300 60 25 chr2 233966974 233968044 -19288539 + L2 LINE L2 2023 3125 -188 2010 146 0 3 chr2 233970821 233971115 -19285468 + AluSx SINE Alu 3 295 -17 2062 147 0 13 chr2 233971174 233971487 -19285096 + AluSx SINE Alu 1 309 -3 532 148 31 8 chr2 233971491 233971619 -19284964 + GA-rich Low_complexity Low_complexity 2 132 0 2475 145 5 0 chr2 233972053 233972452 -19284131 + MSTA LTR MaLR 28 428 0 237 219 0 16 chr2 233974304 233974368 -19282215 - L1MA9 LINE L1 -43 6269 6207 289 268 14 0 chr2 233974369 233974440 -19282143 - L2 LINE L2 -25 3247 3176 1785 225 35 69 chr2 233975100 233975696 -19280887 - L1ME1 LINE L1 -5 6161 5586 2208 115 0 7 chr2 233975714 233976009 -19280574 - AluSc SINE Alu -16 293 1 1024 168 41 5 chr2 233976423 233976619 -19279964 - MER3 DNA MER1_type -6 203 1 284 197 8 145 chr2 233977163 233977280 -19279303 - Charlie8 DNA MER1_type 0 2417 241 477 304 139 52 chr2 233977332 233977944 -19278639 + L1MC4a LINE L1 4168 4832 -1314 * 485 311 4 49 chr2 233977919 233978163 -19278420 + L1MC4a LINE L1 5098 5330 -816 403 145 53 0 chr2 233978164 233978240 -19278343 - L1MA10 LINE L1 -579 5592 5513 3452 150 42 40 chr2 233978240 233978394 -19278189 + L1MA10 LINE L1 5587 5739 -595 273 29 0 0 chr2 233978394 233978428 -19278155 + (TGAA)n Simple_repeat Simple_repeat 4 37 0 3452 150 42 40 chr2 233978428 233978931 -19277652 + L1MA10 LINE L1 5739 6254 -80 1907 139 3 27 chr2 233978931 233979232 -19277351 - AluSx SINE Alu -18 294 1 3452 150 42 40 chr2 233979232 233979313 -19277270 + L1MA10 LINE L1 6254 6333 -1 1650 249 34 36 chr2 233979352 233979962 -19276621 + L1MC4a LINE L1 5317 5925 -1883 5213 83 4 22 chr2 233981999 233982801 -19273782 + L1PA13 LINE L1 5377 6163 0 241 238 127 0 chr2 233983026 233983041 -19273542 + L2 LINE L2 3181 3251 -21 242 229 0 0 chr2 233983041 233983089 -19273494 + MIR SINE MIR 200 247 -15 2042 122 31 3 chr2 233983187 233983473 -19273110 + AluSx SINE Alu 3 296 -16 198 118 0 0 chr2 233983862 233983896 -19272687 + (CA)n Simple_repeat Simple_repeat 1 34 0 427 279 8 33 chr2 233984355 233984477 -19272106 - L2 LINE L2 -6 3307 3189 785 213 43 0 chr2 233985272 233985436 -19271147 + MER63B DNA MER1_type 4 174 -262 256 215 51 0 chr2 233986578 233986657 -19269926 - L1MC4 LINE L1 0 8042 7960 206 196 43 0 chr2 233987307 233987353 -19269230 - L2 LINE L2 -1 3312 3265 2283 96 0 3 chr2 233987733 233988024 -19268559 + AluSc SINE Alu 5 294 -15 235 252 0 59 chr2 233988145 233988264 -19268319 + L1MC4a LINE L1 3592 3703 -2443 472 311 82 53 chr2 233988322 233988698 -19267885 + L1MC4a LINE L1 3866 4252 -1894 3052 151 13 103 chr2 233988705 233988847 -19267736 + L1MA10 LINE L1 5593 5746 -416 2211 120 0 3 chr2 233988847 233989146 -19267437 + AluSx SINE Alu 3 300 -12 3052 151 13 103 chr2 233989146 233989201 -19267382 + L1MA10 LINE L1 5746 5804 -358 1842 142 11 11 chr2 233989201 233989509 -19267074 - AluSx SINE Alu 0 308 1 3052 151 13 103 chr2 233989509 233989578 -19267005 + L1MA10 LINE L1 5804 5878 -284 1854 154 0 3 chr2 233989578 233989864 -19266719 - AluJb SINE Alu -23 289 5 3052 151 13 103 chr2 233989864 233990378 -19266205 + L1MA10 LINE L1 5878 6143 -19 260 285 16 22 chr2 233990393 233990558 -19266025 + L1MC4a LINE L1 5362 5526 -638 313 341 102 23 chr2 233990571 233990867 -19265716 + L1MC4a LINE L1 5540 5824 -297 194 372 22 44 chr2 233991554 233991691 -19264892 - MIR3 SINE MIR -13 195 62 321 335 74 22 chr2 233991725 233991955 -19264628 - MIR SINE MIR -7 255 14 412 287 93 42 chr2 233993008 233993224 -19263359 + L1 LINE L1 2701 2927 -3219 623 289 28 64 chr2 233993383 233993601 -19262982 + MIR SINE MIR 19 228 -34 2508 65 7 3 chr2 233993601 233993911 -19262672 + AluY SINE Alu 1 311 0 348 164 0 0 chr2 233994795 233994862 -19261721 + CT-rich Low_complexity Low_complexity 2 68 0 213 222 0 0 chr2 233995402 233995456 -19261127 + A-rich Low_complexity Low_complexity 1 54 0 2242 109 0 3 chr2 233995957 233996260 -19260323 + AluSx SINE Alu 1 302 -10 457 319 78 62 chr2 233996969 233997503 -19259080 + L2 LINE L2 2731 3272 0 195 42 0 0 chr2 233997746 233997770 -19258813 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1609 166 68 0 chr2 233997772 233998037 -19258546 - AluJb SINE Alu -29 283 1 615 104 38 19 chr2 233998735 233998841 -19257742 - AluSg/x SINE Alu -24 288 181 2335 111 0 0 chr2 233999306 233999612 -19256971 - AluSx SINE Alu -6 306 1 180 258 0 65 chr2 233999996 234000058 -19256525 - MIR SINE MIR -111 151 94 1382 206 141 103 chr2 234001127 234001484 -19255099 + MLT1E1 LTR MaLR 1 394 -260 1195 34 17 17 chr2 234001484 234001659 -19254924 + (GAAA)n Simple_repeat Simple_repeat 2 176 0 1382 206 141 103 chr2 234001659 234001931 -19254652 + MLT1E1 LTR MaLR 394 654 0 745 145 0 83 chr2 234002456 234002601 -19253982 - FLAM_C SINE Alu 0 133 1 291 271 82 27 chr2 234002803 234003122 -19253461 + L1ME LINE L1 4919 5255 -891 * 5697 169 24 7 chr2 234003104 234004285 -19252298 + L1 LINE L1 3413 4616 -1530 1171 161 6 0 chr2 234004285 234004465 -19252118 + MLT2B1 LTR ERVL 1 181 -339 767 135 38 8 chr2 234004467 234004600 -19251983 + L1MA9 LINE L1 6086 6222 -90 314 302 129 16 chr2 234004872 234005120 -19251463 + L1ME LINE L1 5479 5711 -410 210 191 57 19 chr2 234005402 234005507 -19251076 + (TA)n Simple_repeat Simple_repeat 2 110 0 216 327 135 0 chr2 234005564 234005668 -19250915 + L2 LINE L2 3191 3308 -5 27 49 0 0 chr2 234005828 234005869 -19250714 + AT_rich Low_complexity Low_complexity 1 41 0 345 344 56 65 chr2 234006406 234006876 -19249707 - L2 LINE L2 -189 3083 2612 731 159 0 0 chr2 234006876 234006983 -19249600 + AluSq/x SINE Alu 1 107 -206 630 251 17 8 chr2 234007151 234007308 -19249275 + MLT1H LTR MaLR 11 171 -397 22 35 0 0 chr2 234007367 234007396 -19249187 + AT_rich Low_complexity Low_complexity 1 29 0 23 78 0 0 chr2 234007849 234007900 -19248683 + AT_rich Low_complexity Low_complexity 1 51 0 1829 191 0 0 chr2 234008084 234008388 -19248195 - AluJb SINE Alu -8 304 1 2287 105 0 0 chr2 234009161 234009456 -19247127 + AluSx SINE Alu 3 297 -15 1935 139 0 20 chr2 234009614 234009917 -19246666 + AluJo SINE Alu 3 299 -13 995 139 7 0 chr2 234009919 234010070 -19246513 + L1PB4 LINE L1 5997 6148 -8 253 347 104 7 chr2 234010800 234010944 -19245639 - MIR3 SINE MIR -28 180 23 527 253 82 18 chr2 234011184 234011288 -19245295 + MER5A DNA MER1_type 9 130 -59 1910 136 24 10 chr2 234011288 234011582 -19245001 - AluSx SINE Alu -14 298 1 527 253 82 18 chr2 234011582 234011647 -19244936 + MER5A DNA MER1_type 130 189 0 214 194 45 15 chr2 234011933 234012000 -19244583 + T-rich Low_complexity Low_complexity 3 71 0 180 125 0 0 chr2 234012287 234012319 -19244264 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 21 57 0 0 chr2 234012744 234012779 -19243804 + AT_rich Low_complexity Low_complexity 1 35 0 233 305 132 0 chr2 234013214 234013381 -19243202 + LTR16A LTR ERVL 6 194 -256 3108 144 67 0 chr2 234013855 234014361 -19242222 + Tigger3b DNA MER2_type 1 540 -691 2226 102 20 0 chr2 234014361 234014655 -19241928 - AluSx SINE Alu -12 300 1 2943 153 19 6 chr2 234014655 234015082 -19241501 + Tigger3b DNA MER2_type 743 1179 -1850 1828 144 0 24 chr2 234015082 234015405 -19241178 + AluSq SINE Alu 1 316 0 2943 153 19 6 chr2 234015405 234015459 -19241124 + Tigger3b DNA MER2_type 1179 1231 -1 412 303 43 48 chr2 234015574 234015805 -19240778 - MLT1K LTR MaLR -346 242 13 277 188 52 21 chr2 234016579 234016675 -19239908 + (TA)n Simple_repeat Simple_repeat 1 99 0 241 276 46 11 chr2 234017955 234018042 -19238541 - MIR SINE MIR -28 234 145 271 361 35 42 chr2 234018538 234018682 -19237901 - L2 LINE L2 -2 3270 3128 21 57 0 0 chr2 234018713 234018748 -19237835 + AT_rich Low_complexity Low_complexity 1 35 0 2464 111 36 28 chr2 234018909 234019270 -19237313 - THE1B LTR MaLR 0 364 1 30 27 0 0 chr2 234020275 234020312 -19236271 + AT_rich Low_complexity Low_complexity 1 37 0 2416 163 35 9 chr2 234020397 234020821 -19235762 + MSTB LTR MaLR 1 426 0 5643 296 73 30 chr2 234020863 234023538 -19233045 - L2 LINE L2 0 3313 518 2381 23 0 0 chr2 234023549 234023812 -19232771 - L1PA4 LINE L1 -2 6153 5891 3820 34 0 0 chr2 234023812 234024253 -19232330 + L1PA4 LINE L1 5460 5900 -255 660 295 0 6 chr2 234024315 234024498 -19232085 - L2 LINE L2 -2912 402 221 3083 87 30 9 chr2 234024498 234024924 -19231659 - MLT2A1 LTR ERVL -9 435 1 1416 58 39 40 chr2 234025000 234025269 -19231314 + AluY SINE Alu 1 309 0 2302 78 16 47 chr2 234025282 234025601 -19230982 + AluSc SINE Alu 1 309 0 278 268 41 21 chr2 234025612 234025709 -19230874 - L2 LINE L2 -3193 121 23 255 307 40 30 chr2 234026684 234026785 -19229798 + MIR SINE MIR 21 122 -86 236 146 0 21 chr2 234027166 234027214 -19229369 + (CA)n Simple_repeat Simple_repeat 2 48 0 256 345 5 62 chr2 234027358 234027552 -19229031 + MIR SINE MIR 80 262 0 273 119 0 0 chr2 234033782 234033824 -19222759 + (A)n Simple_repeat Simple_repeat 1 42 0 27 73 0 0 chr2 234034639 234034694 -19221889 + AT_rich Low_complexity Low_complexity 1 55 0 211 312 123 58 chr2 234034799 234034937 -19221646 - L2 LINE L2 -3 3269 3123 526 287 66 0 chr2 234035881 234036062 -19220521 - MIR SINE MIR -23 239 47 5040 82 35 0 chr2 234036406 234037067 -19219516 - L1PA13 LINE L1 -5 6158 5475 240 170 0 0 chr2 234037188 234037235 -19219348 - LTR66 LTR ERVL -170 440 394 2112 5 0 0 chr2 234039672 234039896 -19216687 + AluYb8 SINE Alu 86 309 -9 385 262 12 0 chr2 234039911 234039995 -19216588 + MER5A DNA MER1_type 3 87 -102 602 303 20 80 chr2 234040207 234040507 -19216076 - L3 LINE CR1 -7 1570 1289 285 29 0 0 chr2 234041033 234041067 -19215516 + (CA)n Simple_repeat Simple_repeat 1 34 0 198 0 0 0 chr2 234041067 234041089 -19215494 + (TAA)n Simple_repeat Simple_repeat 2 23 0 1202 182 77 80 chr2 234041896 234042209 -19214374 + AluJo SINE Alu 1 312 0 487 262 60 33 chr2 234042440 234042797 -19213786 + MLT1I LTR MaLR 1 409 0 252 313 113 40 chr2 234042959 234043109 -19213474 - MER113 DNA MER1_type? -3 518 358 475 265 121 28 chr2 234043154 234043403 -19213180 - MER113 DNA MER1_type? -233 288 17 1849 167 7 7 chr2 234043550 234043850 -19212733 + AluJo SINE Alu 1 300 -12 582 181 21 69 chr2 234043980 234044124 -19212459 + MIR SINE MIR 80 216 -46 581 229 22 39 chr2 234045192 234045371 -19211212 + MIR SINE MIR 17 192 -70 180 317 173 48 chr2 234045414 234045518 -19211065 - L2 LINE L2 -17 3296 3180 2193 179 63 2 chr2 234045533 234045930 -19210653 - MSTB LTR MaLR -5 421 1 1735 171 0 44 chr2 234046092 234046408 -19210175 + AluJb SINE Alu 1 302 -10 287 244 183 23 chr2 234046890 234046976 -19209607 - MIR SINE MIR -3 259 188 367 187 13 0 chr2 234046976 234047051 -19209532 - MER116 DNA Mariner -4 76 1 287 244 183 23 chr2 234047051 234047095 -19209488 - MIR SINE MIR -74 188 108 2134 112 0 0 chr2 234048129 234048406 -19208177 + AluSc SINE Alu 1 277 -32 734 60 10 0 chr2 234048406 234048506 -19208077 + (GAAA)n Simple_repeat Simple_repeat 3 103 0 216 189 0 0 chr2 234048870 234048907 -19207676 + (TTCA)n Simple_repeat Simple_repeat 4 40 0 182 238 0 0 chr2 234048957 234048999 -19207584 - L2 LINE L2 -94 3178 3137 577 312 42 9 chr2 234049322 234049537 -19207046 - MIR SINE MIR -6 256 35 254 350 73 7 chr2 234049923 234050060 -19206523 - MIR3 SINE MIR -42 166 21 216 158 0 0 chr2 234050325 234050363 -19206220 + T-rich Low_complexity Low_complexity 1 38 0 288 378 81 16 chr2 234051222 234051468 -19205115 + L2 LINE L2 2830 3091 -181 1470 263 62 26 chr2 234051487 234051910 -19204673 + MER74B LTR ERVL 56 505 -117 189 0 0 0 chr2 234051910 234051931 -19204652 + (GCATG)n Simple_repeat Simple_repeat 5 25 0 1470 263 62 26 chr2 234051931 234052054 -19204529 + MER74B LTR ERVL 505 622 0 314 45 23 0 chr2 234052161 234052205 -19204378 + (TG)n Simple_repeat Simple_repeat 1 45 0 1251 142 0 66 chr2 234052209 234052420 -19204163 - AluSg/x SINE Alu -37 273 77 398 273 96 47 chr2 234054006 234054379 -19202204 - L1MC/D LINE L1 -759 5387 5127 785 315 95 16 chr2 234054729 234055816 -19200767 - L1MC/D LINE L1 -1182 4964 3791 22 0 0 0 chr2 234055848 234055870 -19200713 + AT_rich Low_complexity Low_complexity 1 22 0 2209 137 0 6 chr2 234056111 234056470 -19200113 - L1PB1 LINE L1 -1 6150 5794 213 47 70 0 chr2 234056470 234056513 -19200070 + (TA)n Simple_repeat Simple_repeat 1 46 0 1929 161 10 10 chr2 234056546 234056856 -19199727 + AluJo SINE Alu 1 310 -2 1080 97 0 0 chr2 234057516 234057671 -19198912 + (GAA)n Simple_repeat Simple_repeat 2 156 0 1857 181 40 48 chr2 234058144 234058598 -19197985 + MLT1C LTR MaLR 1 450 -17 426 39 0 0 chr2 234060104 234060156 -19196427 + (TG)n Simple_repeat Simple_repeat 1 52 0 220 136 37 25 chr2 234060190 234060271 -19196312 + (TA)n Simple_repeat Simple_repeat 1 82 0 1630 178 7 11 chr2 234060271 234060557 -19196026 - AluJb SINE Alu -27 285 1 392 239 9 0 chr2 234060558 234060667 -19195916 - L1MA9 LINE L1 -207 6105 5996 255 306 0 12 chr2 234060896 234060981 -19195602 + L2 LINE L2 3144 3227 -86 3967 52 0 2 chr2 234061188 234061685 -19194898 + L1PA4 LINE L1 5652 6147 -8 863 232 69 32 chr2 234063106 234063352 -19193231 + MIR SINE MIR 2 256 -6 244 248 53 80 chr2 234063750 234063863 -19192720 + MIR SINE MIR 152 261 -1 1839 155 0 31 chr2 234063863 234064185 -19192398 - AluJo SINE Alu 0 312 1 972 313 94 53 chr2 234064197 234064880 -19191703 - L1MEd LINE L1 -5079 1040 330 1600 162 97 9 chr2 234065054 234065375 -19191208 + MLT2D LTR ERVL 1 349 -65 258 244 0 0 chr2 234065417 234065499 -19191084 + (CA)n Simple_repeat Simple_repeat 2 83 0 304 222 0 0 chr2 234065775 234065829 -19190754 + AluJb SINE Alu 1 54 -254 777 119 0 0 chr2 234065869 234065987 -19190596 + MLT2D LTR ERVL 1 118 -296 1277 193 25 0 chr2 234065996 234066239 -19190344 + AluJb SINE Alu 57 305 -7 2263 100 3 7 chr2 234066570 234066879 -19189704 - AluSq SINE Alu -5 308 1 1468 193 63 14 chr2 234067077 234067425 -19189158 - MLT1A1 LTR MaLR 0 365 1 507 353 42 13 chr2 234067499 234067737 -19188846 - MIR SINE MIR -2 260 16 21 0 0 0 chr2 234067764 234067785 -19188798 + AT_rich Low_complexity Low_complexity 1 21 0 601 232 104 86 chr2 234067816 234067980 -19188603 - MIR SINE MIR -36 226 55 2051 94 3 44 chr2 234067980 234068305 -19188278 + AluSx SINE Alu 1 313 0 601 232 104 86 chr2 234068305 234068359 -19188224 - MIR SINE MIR -207 55 3 1243 189 107 34 chr2 234068378 234068818 -19187765 + Charlie1b DNA MER1_type 41 512 -11 2271 129 0 0 chr2 234068902 234069211 -19187372 + AluSx SINE Alu 1 309 -3 373 248 17 43 chr2 234069320 234069437 -19187146 + MIR SINE MIR 149 262 0 237 394 0 0 chr2 234069679 234069778 -19186805 + MIR SINE MIR 45 143 -65 2275 90 7 0 chr2 234069957 234070245 -19186338 + AluSg SINE Alu 1 290 -20 288 0 0 0 chr2 234070249 234070281 -19186302 + (TA)n Simple_repeat Simple_repeat 1 32 0 1880 174 0 13 chr2 234070398 234070702 -19185881 + AluJo SINE Alu 1 300 -12 3912 178 42 29 chr2 234070713 234071373 -19185210 + L1MB7 LINE L1 5041 5726 -458 2306 118 0 6 chr2 234071373 234071686 -19184897 + AluSx SINE Alu 1 311 -1 3912 178 42 29 chr2 234071686 234072140 -19184443 + L1MB7 LINE L1 5726 6172 -12 464 315 77 33 chr2 234072276 234072309 -19184274 + L1ME4a LINE L1 5265 5295 -826 2088 145 28 14 chr2 234072309 234072668 -19183915 - THE1B LTR MaLR 0 364 1 464 315 77 33 chr2 234072668 234073272 -19183311 + L1ME4a LINE L1 5295 5930 -191 314 282 24 106 chr2 234073360 234073499 -19183084 + L1ME4a LINE L1 1147 1296 -4785 1624 186 7 23 chr2 234073499 234073805 -19182778 + AluJo SINE Alu 1 301 -11 314 282 24 106 chr2 234073805 234073835 -19182748 + L1ME4a LINE L1 1296 6035 -46 295 311 237 0 chr2 234073973 234074108 -19182475 + MIR SINE MIR 86 252 -10 198 80 60 20 chr2 234074607 234074657 -19181926 + (TATAA)n Simple_repeat Simple_repeat 1 52 0 2236 116 13 0 chr2 234075615 234075916 -19180667 + AluSx SINE Alu 1 305 -7 214 100 50 25 chr2 234075943 234075983 -19180600 - MER5A DNA MER1_type -99 90 50 836 182 32 16 chr2 234076204 234076391 -19180192 - MER2 DNA MER2_type -155 190 1 240 353 96 0 chr2 234077356 234077492 -19179091 + MIR SINE MIR 114 262 0 2062 120 3 43 chr2 234077553 234077877 -19178706 + AluSq SINE Alu 1 311 -2 261 207 52 0 chr2 234077891 234077949 -19178634 + MLT1I LTR MaLR 347 407 -2 222 196 233 113 chr2 234078714 234078790 -19177793 - MIR SINE MIR 0 262 197 2085 165 116 41 chr2 234078790 234079274 -19177309 + MLT2B1 LTR ERVL 1 520 0 222 196 233 113 chr2 234079274 234079330 -19177253 - MIR SINE MIR -65 197 114 2123 113 0 39 chr2 234079717 234080027 -19176556 + AluSx SINE Alu 1 298 -14 2350 170 19 30 chr2 234080331 234080618 -19175965 - MLT1C LTR MaLR 0 467 185 2285 108 3 19 chr2 234080618 234080933 -19175650 - AluSq SINE Alu -3 310 1 2350 170 19 30 chr2 234080933 234081116 -19175467 - MLT1C LTR MaLR -282 185 2 2266 119 3 0 chr2 234081177 234081480 -19175103 + AluSx SINE Alu 1 304 -8 481 165 0 0 chr2 234081518 234081597 -19174986 + AluS SINE Alu 226 304 -8 2014 119 7 20 chr2 234082551 234082866 -19173717 - AluSx SINE Alu 0 312 1 347 122 95 14 chr2 234082908 234082982 -19173601 + L1MA6 LINE L1 6221 6300 0 1026 236 173 60 chr2 234083127 234083711 -19172872 + L1MC4 LINE L1 7393 8042 0 28 0 0 0 chr2 234083712 234083740 -19172843 + AT_rich Low_complexity Low_complexity 1 28 0 2319 104 3 3 chr2 234083785 234084094 -19172489 - AluSq SINE Alu -3 310 2 526 221 98 6 chr2 234084351 234084514 -19172069 - MER5B DNA MER1_type 0 178 1 665 168 50 62 chr2 234084611 234084772 -19171811 + AluJ SINE Alu 15 173 -139 824 138 0 0 chr2 234084881 234084997 -19171586 + AluJ SINE Alu 167 282 -30 322 223 96 32 chr2 234085013 234085107 -19171476 + MER5A DNA MER1_type 64 163 -26 2038 148 3 7 chr2 234085141 234085451 -19171132 - AluSx SINE Alu -3 309 1 258 105 0 0 chr2 234085604 234085642 -19170941 + (TTCC)n Simple_repeat Simple_repeat 1 38 0 281 295 54 18 chr2 234085840 234085952 -19170631 + MLT1L LTR MaLR 363 478 -137 266 241 71 113 chr2 234086584 234086725 -19169858 + MER5A DNA MER1_type 51 185 -4 2332 101 0 0 chr2 234089157 234089464 -19167119 + AluSc SINE Alu 1 307 -2 2162 113 0 0 chr2 234090757 234091073 -19165510 + AluSx SINE Alu 1 316 0 240 262 48 60 chr2 234091106 234091190 -19165393 - MIR SINE MIR -2 260 178 360 43 0 0 chr2 234091211 234091294 -19165289 - AluSx SINE Alu 0 320 238 1487 114 0 0 chr2 234091294 234091496 -19165087 - AluSx SINE Alu -110 202 1 618 217 84 0 chr2 234091506 234091649 -19164934 - MIR SINE MIR -106 156 2 1191 133 0 0 chr2 234092247 234092412 -19164171 - AluSg/x SINE Alu -15 297 133 283 287 75 11 chr2 234092524 234092618 -19163965 + MIR SINE MIR 163 262 0 2277 81 3 7 chr2 234092689 234092985 -19163598 + AluY SINE Alu 1 295 -16 249 258 125 42 chr2 234093076 234093492 -19163091 - L1MC/D LINE L1 -748 5398 5106 2009 138 21 0 chr2 234093773 234094063 -19162520 + AluSx SINE Alu 1 296 -16 24 0 0 0 chr2 234094068 234094092 -19162491 + AT_rich Low_complexity Low_complexity 1 24 0 355 333 14 35 chr2 234094157 234094298 -19162285 - MIR3 SINE MIR -63 145 8 1972 108 45 14 chr2 234096337 234096625 -19159958 + AluSx SINE Alu 1 297 -15 510 305 0 23 chr2 234096797 234096971 -19159612 - MER58B DNA MER1_type 0 341 172 789 307 73 29 chr2 234097193 234097427 -19159156 - L2 LINE L2 -767 2547 2288 2124 146 0 0 chr2 234097427 234097722 -19158861 + AluSx SINE Alu 1 295 -17 789 307 73 29 chr2 234097722 234097868 -19158715 - L2 LINE L2 -1026 2288 2150 2248 116 0 25 chr2 234098053 234098373 -19158210 - AluSx SINE Alu 0 312 1 589 184 8 24 chr2 234098430 234098555 -19158028 + L1PA16 LINE L1 6042 6164 -2 33 0 0 0 chr2 234098589 234098622 -19157961 + AT_rich Low_complexity Low_complexity 1 33 0 416 175 48 10 chr2 234099060 234099163 -19157420 + L1ME LINE L1 166 272 -5933 449 83 97 14 chr2 234099186 234099258 -19157325 - AluS SINE Alu -235 78 1 543 229 75 42 chr2 234099260 234099474 -19157109 + L1ME LINE L1 1441 1661 -4735 456 319 32 0 chr2 234099510 234099695 -19156888 + L1ME LINE L1 1652 1842 -4554 666 235 92 35 chr2 234100013 234100355 -19156228 - LTR37B LTR ERV1 0 468 90 1462 176 30 57 chr2 234100487 234100857 -19155726 - MLT1A2 LTR MaLR -11 363 4 297 267 115 38 chr2 234101207 234101410 -19155173 - MIR SINE MIR -19 243 13 1938 133 0 7 chr2 234101494 234101780 -19154803 - AluSx SINE Alu -28 284 1 548 226 144 15 chr2 234101835 234102030 -19154553 - L2 LINE L2 -896 2418 2199 867 276 41 8 chr2 234102338 234102581 -19154002 - MIR SINE MIR -4 258 8 1694 138 0 51 chr2 234103114 234103426 -19153157 + L1MB4 LINE L1 5834 6129 -51 2100 139 0 3 chr2 234103438 234103733 -19152850 + AluSx SINE Alu 2 295 -17 1598 167 43 4 chr2 234103746 234104004 -19152579 + AluJo SINE Alu 37 304 -8 297 0 0 0 chr2 234104025 234104058 -19152525 + (CA)n Simple_repeat Simple_repeat 2 34 0 2438 68 0 3 chr2 234104120 234104412 -19152171 + AluY SINE Alu 1 291 -20 258 32 0 0 chr2 234104444 234104475 -19152108 + (CA)n Simple_repeat Simple_repeat 2 32 0 263 136 15 45 chr2 234104533 234104599 -19151984 + L1MB1 LINE L1 6122 6167 -1 214 137 0 39 chr2 234104601 234104652 -19151931 + (GGGAA)n Simple_repeat Simple_repeat 2 50 0 796 239 28 0 chr2 234104694 234104870 -19151713 + MER63A DNA MER1_type 30 210 0 664 266 47 19 chr2 234104874 234105088 -19151495 + L2 LINE L2 3094 3313 0 230 303 20 30 chr2 234105221 234105320 -19151263 + Charlie7 DNA MER1_type 5 102 -2510 238 213 0 0 chr2 234105483 234105544 -19151039 + Charlie7 DNA MER1_type 96 156 -2456 271 143 0 0 chr2 234105718 234105760 -19150823 + Charlie7 DNA MER1_type 1805 1846 -766 203 267 0 33 chr2 234105922 234105982 -19150601 + MER5A DNA MER1_type 12 69 -120 395 345 26 0 chr2 234106037 234106153 -19150430 + L2 LINE L2 3153 3271 -1 2633 108 28 19 chr2 234107815 234108176 -19148407 - THE1B LTR MaLR 0 364 1 23 33 0 0 chr2 234108178 234108208 -19148375 + AT_rich Low_complexity Low_complexity 1 30 0 512 154 58 0 chr2 234108252 234108356 -19148227 - MIR SINE MIR -127 135 26 1882 133 23 13 chr2 234109329 234109631 -19146952 + AluSq SINE Alu 1 305 -8 311 257 49 83 chr2 234109931 234110075 -19146508 + MIR3 SINE MIR 41 179 -29 383 298 48 16 chr2 234110370 234110494 -19146089 + L2 LINE L2 3145 3272 0 357 306 27 3 chr2 234110498 234110697 -19145886 - MIR SINE MIR 0 262 12 2308 90 0 13 chr2 234111396 234111696 -19144887 - AluSx SINE Alu -16 296 1 31 26 0 0 chr2 234112106 234112144 -19144439 + AT_rich Low_complexity Low_complexity 1 38 0 258 32 0 0 chr2 234112307 234112338 -19144245 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1698 123 21 0 chr2 234112345 234112588 -19143995 - AluSq SINE Alu -52 261 14 221 56 0 28 chr2 234112896 234112932 -19143651 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 676 209 0 0 chr2 234112935 234113040 -19143543 - FRAM SINE Alu -30 146 42 380 179 0 179 chr2 234113058 234113164 -19143419 - L1MA4 LINE L1 -1 6299 6226 1463 186 16 36 chr2 234113164 234113470 -19143113 + AluJo SINE Alu 13 312 0 380 179 0 179 chr2 234113470 234113514 -19143069 - L1MA4 LINE L1 -74 6226 6176 182 222 89 0 chr2 234114048 234114093 -19142490 + MIR SINE MIR 86 134 -74 1685 154 11 71 chr2 234114231 234114595 -19141988 - MER4A LTR ERV1 -1 663 263 535 122 89 0 chr2 234114595 234114685 -19141898 - MER4A LTR ERV1 -566 98 1 741 312 96 24 chr2 234114714 234115134 -19141449 - LTR16A LTR ERVL 0 457 7 258 329 66 14 chr2 234115198 234115411 -19141172 - HERV16 LTR ERVL -45 4951 4728 317 230 137 37 chr2 234115727 234115888 -19140695 - MLT1J2 LTR MaLR -6 444 268 275 217 14 43 chr2 234115920 234115989 -19140594 - MER76 LTR ERV -21 667 601 3150 39 0 0 chr2 234115989 234116347 -19140236 + L1PA4 LINE L1 5798 6155 0 983 202 231 88 chr2 234116379 234116733 -19139850 - MER76 LTR ERV -72 616 161 2205 104 17 3 chr2 234116733 234117031 -19139552 - AluSq SINE Alu -11 302 1 983 202 231 88 chr2 234117031 234117200 -19139383 - MER76 LTR ERV -527 161 18 487 274 40 17 chr2 234117188 234117363 -19139220 - MLT1J2 LTR MaLR -271 179 1 * 2228 90 4 0 chr2 234118426 234118740 -19137843 - AluY SINE Alu 0 315 1 1207 217 80 83 chr2 234119230 234119604 -19136979 + MLT1A2 LTR MaLR 1 373 -1 447 221 57 16 chr2 234119664 234119786 -19136797 + MLT1I LTR MaLR 1 127 -282 244 242 61 30 chr2 234119826 234119892 -19136691 + MLT1J1 LTR MaLR 241 308 -138 278 200 0 0 chr2 234119954 234119999 -19136584 + MLT1I LTR MaLR 365 409 0 502 259 142 81 chr2 234121687 234121739 -19134844 - MLT1L LTR MaLR -254 361 314 2084 129 0 35 chr2 234121739 234122056 -19134527 - AluSx SINE Alu -6 306 1 502 259 142 81 chr2 234122056 234122335 -19134248 - MLT1L LTR MaLR -301 314 10 537 345 32 43 chr2 234122518 234123080 -19133503 + L2 LINE L2 1353 1908 -1406 1749 179 49 9 chr2 234123109 234123455 -19133128 + MLT1A1 LTR MaLR 6 365 0 736 78 0 29 chr2 234123511 234123613 -19132970 - AluSp SINE Alu -6 307 209 1058 98 0 0 chr2 234123618 234123751 -19132832 - AluSp SINE Alu -180 133 1 827 211 86 21 chr2 234123932 234124171 -19132412 + MIR SINE MIR 10 262 0 450 315 120 35 chr2 234124182 234124550 -19132033 + L2 LINE L2 2220 2618 -696 2304 113 3 0 chr2 234125138 234125448 -19131135 + AluSx SINE Alu 1 311 -1 273 119 0 0 chr2 234125506 234125548 -19131035 + (TG)n Simple_repeat Simple_repeat 1 42 0 665 186 18 0 chr2 234125551 234125664 -19130919 - FLAM_C SINE Alu -18 115 1 308 349 98 8 chr2 234125664 234125796 -19130787 + MER5B DNA MER1_type 35 178 0 14524 198 20 12 chr2 234126284 234128047 -19128536 + L1PB1 LINE L1 2877 4625 -2964 882 144 0 0 chr2 234128047 234128172 -19128411 + FLAM_C SINE Alu 1 125 -8 14524 198 20 12 chr2 234128172 234128448 -19128135 + L1PB1 LINE L1 4625 4897 -2692 2077 108 10 14 chr2 234128448 234128745 -19127838 + AluSq SINE Alu 1 296 -17 14524 198 20 12 chr2 234128745 234131014 -19125569 + L1PB1 LINE L1 4897 7234 -355 378 0 0 0 chr2 234131014 234131056 -19125527 + (CA)n Simple_repeat Simple_repeat 2 43 0 14524 198 20 12 chr2 234131056 234131414 -19125169 + L1PB1 LINE L1 7234 7588 -1 1861 120 31 3 chr2 234131528 234131820 -19124763 + AluSq SINE Alu 1 300 -13 449 202 11 11 chr2 234132351 234132445 -19124138 - MIR SINE MIR -85 177 84 180 321 38 75 chr2 234133509 234133721 -19122862 + L2 LINE L2 2950 3153 -119 21 0 0 0 chr2 234134375 234134396 -19122187 + AT_rich Low_complexity Low_complexity 1 21 0 290 102 0 0 chr2 234134417 234134466 -19122117 - AluY SINE Alu 0 300 252 1512 104 0 0 chr2 234134466 234134658 -19121925 - AluY SINE Alu -119 192 1 21 0 0 0 chr2 234134812 234134833 -19121750 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 234135069 234135090 -19121493 + AT_rich Low_complexity Low_complexity 1 21 0 2938 82 0 8 chr2 234135520 234135887 -19120696 - THE1B LTR MaLR 0 364 1 267 287 58 67 chr2 234135994 234136217 -19120366 + MLT1J LTR MaLR 289 509 -2 558 302 0 50 chr2 234136538 234136717 -19119866 + MIR SINE MIR 65 234 -28 255 103 0 0 chr2 234137065 234137104 -19119479 + (CA)n Simple_repeat Simple_repeat 2 40 0 2192 113 13 0 chr2 234137193 234137493 -19119090 - AluSg SINE Alu -6 304 1 554 293 94 61 chr2 234137514 234137950 -19118633 + L2 LINE L2 2616 3088 -225 1098 119 12 12 chr2 234137961 234138129 -19118454 - FRAM SINE Alu -9 167 1 473 263 97 6 chr2 234138158 234138333 -19118250 + L2 LINE L2 3123 3313 0 372 164 47 55 chr2 234138905 234138984 -19117599 + L1MC3 LINE L1 6985 7064 -721 2919 82 3 0 chr2 234138984 234139338 -19117245 + THE1A LTR MaLR 1 355 0 372 164 47 55 chr2 234139338 234139386 -19117197 + L1MC3 LINE L1 7064 7111 -674 300 179 18 0 chr2 234139387 234139443 -19117140 + MLT1F1 LTR MaLR 61 117 -450 2420 199 19 19 chr2 234139445 234139801 -19116782 + L1MD3 LINE L1 7513 7871 -124 2395 134 67 46 chr2 234139801 234140036 -19116547 - MSTB LTR MaLR 0 426 176 1695 155 29 11 chr2 234140036 234140346 -19116237 - AluJo SINE Alu 0 315 1 2395 134 67 46 chr2 234140346 234140526 -19116057 - MSTB LTR MaLR -250 176 1 2420 199 19 19 chr2 234140526 234140652 -19115931 + L1MD3 LINE L1 7870 7995 0 344 351 7 20 chr2 234140703 234140851 -19115732 - MIR SINE MIR -101 161 16 2158 104 7 3 chr2 234141070 234141357 -19115226 + AluSq SINE Alu 1 288 -25 353 266 47 94 chr2 234142462 234142474 -19114109 - MIR SINE MIR -65 197 186 2003 133 14 3 chr2 234142474 234142768 -19113815 + AluSx SINE Alu 2 298 -14 353 266 47 94 chr2 234142768 234142833 -19113750 - MIR SINE MIR -76 186 119 1493 159 30 0 chr2 234142833 234143065 -19113518 - L1PB4 LINE L1 -12 6144 5906 353 266 47 94 chr2 234143065 234143178 -19113405 - MIR SINE MIR -143 119 15 1808 129 4 0 chr2 234143813 234144068 -19112515 + AluSx SINE Alu 41 296 -16 217 186 47 0 chr2 234144537 234144580 -19112003 - MIR3 SINE MIR -11 197 153 2199 116 3 0 chr2 234144666 234144958 -19111625 + AluSx SINE Alu 1 293 -19 1332 209 36 33 chr2 234145375 234145705 -19110878 + MER2 DNA MER2_type 1 331 -14 579 310 95 16 chr2 234145860 234146102 -19110481 - MIR SINE MIR 0 262 2 2244 118 0 9 chr2 234146253 234146568 -19110015 + AluSx SINE Alu 1 312 0 474 281 42 52 chr2 234146588 234146780 -19109803 - L2 LINE L2 -191 3081 2892 2277 91 3 0 chr2 234146977 234147263 -19109320 + AluSq SINE Alu 6 292 -21 1383 178 33 30 chr2 234147302 234147593 -19108990 + L1MD3 LINE L1 7691 7985 -10 1437 162 33 30 chr2 234147593 234147895 -19108688 + L1MA9 LINE L1 6000 6302 -10 1383 178 33 30 chr2 234147895 234147907 -19108676 + L1MD3 LINE L1 7985 7995 0 372 293 20 7 chr2 234148041 234148188 -19108395 + L1M4 LINE L1 2933 3081 -3065 192 77 0 0 chr2 234148188 234148214 -19108369 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2723 135 124 33 chr2 234148312 234148829 -19107754 + LTR6A LTR ERV1 1 564 0 830 219 0 0 chr2 234148843 234148989 -19107594 + AluJb SINE Alu 134 279 -33 245 0 86 0 chr2 234148990 234149025 -19107558 + T-rich Low_complexity Low_complexity 2 39 0 1982 166 55 8 chr2 234149039 234149419 -19107164 - MER65A LTR ERV1 -47 398 1 316 289 56 36 chr2 234149420 234149532 -19107051 + L1M4 LINE L1 3125 3233 -2913 5159 97 20 10 chr2 234149532 234150216 -19106367 + LTR8 LTR ERV1 1 691 0 316 289 56 36 chr2 234150216 234150408 -19106175 + L1M4 LINE L1 3233 3435 -2711 2279 118 0 0 chr2 234150540 234150846 -19105737 + AluSx SINE Alu 1 306 -6 896 108 8 15 chr2 234151320 234151450 -19105133 - LTR8 LTR ERV1 0 691 563 257 51 26 0 chr2 234151462 234151501 -19105082 + (TTTTTG)n Simple_repeat Simple_repeat 2 41 0 4439 76 3 14 chr2 234151501 234152083 -19104500 - LTR8 LTR ERV1 -115 576 1 1202 188 9 0 chr2 234152323 234152541 -19104042 + AluJo SINE Alu 87 306 -6 2176 109 6 16 chr2 234152693 234153006 -19103577 + AluSx SINE Alu 1 310 -2 189 0 0 0 chr2 234153586 234153607 -19102976 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2223 97 0 0 chr2 234153610 234153898 -19102685 - AluSx SINE Alu -24 288 1 630 338 77 0 chr2 234153952 234154186 -19102397 - MIR SINE MIR -6 256 5 249 312 59 43 chr2 234154258 234154444 -19102139 - L2 LINE L2 -120 3193 3005 1955 114 14 4 chr2 234154473 234154777 -19101806 + AluSx SINE Alu 1 307 0 2494 36 0 16 chr2 234155038 234155342 -19101241 - AluY SINE Alu -12 299 1 4188 129 5 32 chr2 234155406 234156035 -19100548 - LTR9 LTR ERV1 0 612 1 635 289 185 31 chr2 234156038 234156492 -19100091 - L2 LINE L2 -654 2660 2137 1471 198 17 49 chr2 234157582 234157930 -19098653 - MLT1A1 LTR MaLR -2 363 27 779 196 0 0 chr2 234157969 234158102 -19098481 + FLAM_C SINE Alu 1 133 0 354 138 0 0 chr2 234158103 234158161 -19098422 + (GA)n Simple_repeat Simple_repeat 2 59 0 342 0 0 0 chr2 234158162 234158200 -19098383 + (GGGGA)n Simple_repeat Simple_repeat 1 38 0 2436 68 3 0 chr2 234159460 234159754 -19096829 + AluSg SINE Alu 1 295 -15 295 241 134 11 chr2 234160213 234160356 -19096227 - MIR SINE MIR -81 127 16 556 272 194 0 chr2 234160701 234160918 -19095665 + LTR50 LTR ERVL 423 681 -114 735 195 8 0 chr2 234160924 234161047 -19095536 + AluJo/FLAM SINE Alu 2 125 -187 1851 96 28 8 chr2 234161049 234161299 -19095284 - AluSq SINE Alu -14 299 45 289 137 171 0 chr2 234161314 234161400 -19095183 + LTR50 LTR ERVL 425 795 0 1377 298 40 22 chr2 234161415 234161921 -19094662 - ERVL LTR ERVL -2894 2870 2356 2289 103 0 3 chr2 234162236 234162538 -19094045 + AluSp SINE Alu 1 301 -12 213 250 0 0 chr2 234162802 234162862 -19093721 + GA-rich Low_complexity Low_complexity 2 61 0 419 308 49 81 chr2 234163472 234163691 -19092892 - L2 LINE L2 0 3272 3060 2586 92 0 47 chr2 234163691 234164073 -19092510 - THE1B LTR MaLR 0 364 1 419 308 49 81 chr2 234164073 234164100 -19092483 - L2 LINE L2 -212 3060 3034 553 249 86 20 chr2 234164124 234164321 -19092262 - L2 LINE L2 -5 3308 3099 883 142 0 15 chr2 234164480 234164614 -19091969 - FLAM_C SINE Alu -1 132 1 440 321 81 67 chr2 234164777 234165106 -19091477 - L2 LINE L2 -422 2892 2554 2246 136 0 0 chr2 234165106 234165416 -19091167 - AluSx SINE Alu -2 310 1 440 321 81 67 chr2 234165416 234165504 -19091079 - L2 LINE L2 -760 2554 2469 275 287 60 0 chr2 234165711 234165833 -19090750 + MIR SINE MIR 24 151 -61 312 252 110 24 chr2 234166048 234166175 -19090408 + MER103 DNA DNA 11 148 -18 2224 125 0 3 chr2 234166277 234166573 -19090010 - AluSx SINE Alu -17 295 1 393 230 66 94 chr2 234167652 234167865 -19088718 - MIR SINE MIR -8 254 48 219 303 148 21 chr2 234167926 234168068 -19088515 + MIR3 SINE MIR 30 189 -19 2070 123 38 29 chr2 234168135 234168476 -19088107 + THE1B LTR MaLR 21 364 0 251 250 18 0 chr2 234169035 234169091 -19087492 + CT-rich Low_complexity Low_complexity 3 59 0 357 291 28 14 chr2 234169200 234169341 -19087242 + MARNA DNA Mariner 155 297 -289 2438 98 0 0 chr2 234169897 234170202 -19086381 - AluSg SINE Alu -5 305 1 2738 63 14 0 chr2 234170743 234171093 -19085490 - THE1A LTR MaLR 0 355 1 330 253 46 135 chr2 234171100 234171404 -19085179 - L2 LINE L2 -24 3289 3013 1450 106 32 0 chr2 234171511 234171729 -19084854 + L1PA10 LINE L1 5940 6164 -4 31 0 0 0 chr2 234171729 234171760 -19084823 + AT_rich Low_complexity Low_complexity 1 31 0 225 220 0 17 chr2 234171762 234171821 -19084762 + (TA)n Simple_repeat Simple_repeat 2 59 0 3286 195 23 72 chr2 234172164 234172989 -19083594 - LTR1 LTR ERV1 0 785 1 543 264 0 31 chr2 234173360 234173489 -19083094 - MER58 DNA MER1_type -90 125 1 1290 146 41 143 chr2 234174227 234174570 -19082013 - AluJo SINE Alu -4 308 1 280 291 32 5 chr2 234174729 234174887 -19081696 - MIR SINE MIR 0 262 28 1999 90 0 135 chr2 234175389 234175745 -19080838 - AluSq SINE Alu -5 308 1 2276 208 55 48 chr2 234175798 234176399 -19080184 - MER77 LTR ERV1 0 605 1 2192 124 0 3 chr2 234176457 234176755 -19079828 + AluSx SINE Alu 1 297 -15 188 245 75 38 chr2 234177083 234177189 -19079394 - L2 LINE L2 -214 3058 2949 228 111 0 0 chr2 234177578 234177614 -19078969 + (GA)n Simple_repeat Simple_repeat 1 36 0 2143 131 0 22 chr2 234177931 234178243 -19078340 + AluSx SINE Alu 1 305 -7 757 70 35 0 chr2 234178462 234178577 -19078006 + (GGAA)n Simple_repeat Simple_repeat 4 122 0 181 205 0 0 chr2 234179341 234179380 -19077203 - MIR SINE MIR -9 253 215 * 307 276 0 0 chr2 234179347 234179423 -19077160 - L2 LINE L2 -21 3292 3217 1314 157 15 122 chr2 234179666 234179793 -19076790 + AluYa8 SINE Alu 1 140 -170 2199 103 10 3 chr2 234179793 234180084 -19076499 - AluSq SINE Alu -20 293 1 1314 157 15 122 chr2 234180084 234180293 -19076290 + AluYa8 SINE Alu 140 301 -9 222 37 0 0 chr2 234180413 234180440 -19076143 + (CA)n Simple_repeat Simple_repeat 2 28 0 2234 121 0 3 chr2 234180878 234181184 -19075399 + AluSx SINE Alu 1 305 -7 437 232 268 14 chr2 234181209 234181429 -19075154 - Charlie8 DNA MER1_type -2140 277 2 436 264 94 16 chr2 234181671 234181972 -19074611 - MLT1J2 LTR MaLR -24 426 77 2150 102 0 11 chr2 234182074 234182393 -19074190 - AluSx SINE Alu 0 316 1 1605 165 16 55 chr2 234183076 234183385 -19073198 + AluJb SINE Alu 1 297 -15 25 0 0 0 chr2 234183916 234183941 -19072642 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr2 234184144 234184167 -19072416 + AT_rich Low_complexity Low_complexity 1 23 0 2329 89 6 29 chr2 234184291 234184604 -19071979 - AluSq SINE Alu -5 308 3 758 142 26 0 chr2 234184796 234184909 -19071674 + FLAM_C SINE Alu 3 118 -25 21 0 0 0 chr2 234184909 234184930 -19071653 + AT_rich Low_complexity Low_complexity 1 21 0 1645 170 3 46 chr2 234185471 234185777 -19070806 + AluJo SINE Alu 1 293 -19 21 36 0 0 chr2 234185886 234185914 -19070669 + AT_rich Low_complexity Low_complexity 1 28 0 2078 129 7 0 chr2 234186143 234186429 -19070154 + AluSx SINE Alu 1 288 -24 2394 91 3 0 chr2 234187044 234187342 -19069241 - AluSx SINE Alu -11 301 3 236 220 11 44 chr2 234187555 234187571 -19069012 + A-rich Low_complexity Low_complexity 1 16 -72 1953 118 7 4 chr2 234187571 234187842 -19068741 + AluSp SINE Alu 1 272 -41 236 220 11 44 chr2 234187842 234187916 -19068667 + A-rich Low_complexity Low_complexity 16 88 0 390 115 0 46 chr2 234187955 234188042 -19068541 + (GAAA)n Simple_repeat Simple_repeat 1 83 0 2218 106 3 13 chr2 234188524 234188698 -19067885 - AluSx SINE Alu -4 308 137 2329 92 0 3 chr2 234188698 234188993 -19067590 - AluSc SINE Alu -15 294 1 2218 106 3 13 chr2 234188993 234189129 -19067454 - AluSx SINE Alu -175 137 1 1980 98 55 4 chr2 234190561 234190836 -19065747 + AluSx SINE Alu 12 300 -12 2535 91 15 0 chr2 234191157 234191498 -19065085 - L1PA13 LINE L1 -2 6161 5816 719 227 178 0 chr2 234192172 234192397 -19064186 - MER69 DNA AcHobo -14 2512 2248 478 219 10 0 chr2 234192394 234192490 -19064093 - MER69 DNA AcHobo -1071 155 59 * 1613 164 11 11 chr2 234192971 234193245 -19063338 - AluJb SINE Alu -19 293 20 820 199 7 7 chr2 234193251 234193397 -19063186 - AluJo SINE Alu -166 146 1 2254 103 10 0 chr2 234193509 234193801 -19062782 - AluSg SINE Alu -14 296 2 2276 123 0 0 chr2 234193803 234194105 -19062478 - AluSx SINE Alu -8 304 3 2053 111 11 0 chr2 234195446 234195753 -19060830 - AluSx SINE Alu 0 310 1 977 186 15 100 chr2 234196411 234196680 -19059903 + MIR SINE MIR 17 262 0 204 40 0 0 chr2 234196691 234196716 -19059867 + (CAT)n Simple_repeat Simple_repeat 1 25 0 661 202 110 17 chr2 234197345 234197518 -19059065 - MER5A DNA MER1_type 0 189 1 1856 82 12 0 chr2 234197746 234198003 -19058580 - L1PA7 LINE L1 -773 5373 5114 5829 56 32 1 chr2 234198003 234198726 -19057857 + L1PA7 LINE L1 5401 6151 -3 193 232 18 18 chr2 234198973 234199029 -19057554 - L2 LINE L2 -67 3246 3191 255 262 224 0 chr2 234199977 234200084 -19056499 + L2 LINE L2 3142 3272 0 2285 120 0 0 chr2 234200109 234200409 -19056174 + AluSx SINE Alu 3 302 -10 374 226 80 80 chr2 234200622 234200899 -19055684 - L1P5 LINE L1 -354 5797 5513 300 295 22 50 chr2 234200942 234201081 -19055502 - L1ME LINE L1 -688 5433 5299 246 226 43 61 chr2 234201149 234201264 -19055319 + L1MC/D LINE L1 5800 5912 -1896 2670 29 7 3 chr2 234201271 234201578 -19055005 - AluY SINE Alu -3 308 1 306 0 0 0 chr2 234202032 234202066 -19054517 + (CA)n Simple_repeat Simple_repeat 2 35 0 846 164 14 0 chr2 234202262 234202402 -19054181 - AluSg/x SINE Alu -10 302 161 866 126 0 0 chr2 234204311 234204430 -19052153 - AluSq/x SINE Alu -193 119 1 1114 92 0 0 chr2 234204515 234204656 -19051927 + AluSq/x SINE Alu 1 141 -172 2366 93 0 37 chr2 234204656 234204978 -19051605 + AluSg SINE Alu 1 310 0 860 265 109 46 chr2 234205172 234205372 -19051211 + HAL1 LINE L1 751 937 -1570 219 69 0 0 chr2 234205372 234205401 -19051182 + (CA)n Simple_repeat Simple_repeat 2 30 0 860 265 109 46 chr2 234205401 234205577 -19051006 + HAL1 LINE L1 937 1100 -1407 649 175 70 0 chr2 234205577 234205691 -19050892 + FLAM_A SINE Alu 1 122 -11 860 265 109 46 chr2 234205691 234205743 -19050840 + HAL1 LINE L1 1100 1147 -1360 1724 171 17 3 chr2 234205743 234206035 -19050548 + AluJb SINE Alu 2 297 -15 860 265 109 46 chr2 234206035 234206303 -19050280 + HAL1 LINE L1 1147 1493 -1014 2231 111 3 10 chr2 234206418 234206716 -19049867 - AluSx SINE Alu -14 298 3 752 166 55 18 chr2 234206832 234206995 -19049588 - L1MA9 LINE L1 -34 6278 6110 * 11740 120 26 39 chr2 234206983 234207400 -19049183 + L1PA11 LINE L1 3268 3689 -2485 183 42 0 0 chr2 234207400 234207424 -19049159 + (CAA)n Simple_repeat Simple_repeat 3 26 0 11740 120 26 39 chr2 234207424 234209860 -19046723 + L1PA11 LINE L1 3689 6083 -91 616 115 74 8 chr2 234209863 234209985 -19046598 - L1MA9 LINE L1 -196 6116 5987 871 80 26 0 chr2 234210015 234210128 -19046455 - AluSq/x SINE Alu -196 116 1 425 145 0 0 chr2 234210489 234210565 -19046018 + Alu SINE Alu 234 309 -2 2114 99 27 7 chr2 234211159 234211451 -19045132 + AluSp SINE Alu 1 298 -15 478 323 35 35 chr2 234211795 234212052 -19044531 + MIR SINE MIR 6 262 0 2205 91 14 3 chr2 234212065 234212352 -19044231 + AluSq SINE Alu 1 290 -23 23 0 0 0 chr2 234212352 234212375 -19044208 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 234212641 234212663 -19043920 + AT_rich Low_complexity Low_complexity 1 22 0 2148 128 0 0 chr2 234212840 234213136 -19043447 - AluSq SINE Alu -17 296 1 315 246 49 122 chr2 234213371 234213659 -19042924 - Charlie8 DNA MER1_type -1015 1402 49 1979 113 4 14 chr2 234213666 234213969 -19042614 + AluSq SINE Alu 15 314 0 1786 185 85 70 chr2 234214868 234214962 -19041621 + MLT1C LTR MaLR 1 92 -375 2191 116 3 0 chr2 234214962 234215254 -19041329 + AluSq SINE Alu 1 293 -20 1786 185 85 70 chr2 234215254 234215381 -19041202 + MLT1C LTR MaLR 92 216 -251 399 21 0 0 chr2 234215381 234215429 -19041154 + (CA)n Simple_repeat Simple_repeat 2 49 0 1786 185 85 70 chr2 234215429 234215666 -19040917 + MLT1C LTR MaLR 216 467 0 1993 200 24 71 chr2 234215939 234216101 -19040482 + L1M4 LINE L1 3692 3860 -2286 2051 142 0 13 chr2 234216101 234216411 -19040172 + AluSx SINE Alu 1 306 -6 1993 200 24 71 chr2 234216411 234216433 -19040150 + L1M4 LINE L1 3860 3881 -2265 1616 178 14 11 chr2 234216433 234216714 -19039869 + AluJo SINE Alu 11 292 -20 1993 200 24 71 chr2 234216714 234217062 -19039521 + L1M4 LINE L1 3881 4200 -1946 586 282 94 14 chr2 234217309 234217522 -19039061 - MIR SINE MIR -31 231 2 1999 110 50 0 chr2 234217634 234217916 -19038667 - AluSx SINE Alu -16 296 1 2242 108 3 7 chr2 234218470 234218777 -19037806 - AluSq SINE Alu -7 306 1 2133 78 0 4 chr2 234219802 234220070 -19036513 + AluY SINE Alu 33 299 -12 1621 156 19 79 chr2 234220589 234220904 -19035679 + AluJb SINE Alu 1 296 -16 1962 135 3 14 chr2 234221329 234221625 -19034958 + AluSq SINE Alu 1 293 -20 2570 69 0 3 chr2 234222450 234222756 -19033827 - AluY SINE Alu -6 305 1 24 0 0 0 chr2 234223110 234223134 -19033449 + AT_rich Low_complexity Low_complexity 1 24 0 2032 156 3 3 chr2 234223157 234223465 -19033118 + AluJb SINE Alu 1 308 -4 2202 144 61 52 chr2 234223654 234224036 -19032547 + MSTA LTR MaLR 1 389 -39 1478 116 0 58 chr2 234224036 234224277 -19032306 - AluJb SINE Alu 0 312 86 2202 144 61 52 chr2 234224277 234224318 -19032265 + MSTA LTR MaLR 389 428 0 1751 160 38 0 chr2 234224896 234225184 -19031399 + AluJb SINE Alu 1 299 -13 443 230 121 46 chr2 234225237 234225535 -19031048 + L2 LINE L2 2644 3030 -283 2403 89 3 0 chr2 234225535 234225838 -19030745 + AluSx SINE Alu 1 304 -8 443 230 121 46 chr2 234225838 234225888 -19030695 + L2 LINE L2 3030 3075 -238 2385 93 3 0 chr2 234225897 234226198 -19030385 - AluSg SINE Alu -8 302 1 2018 145 14 0 chr2 234226485 234226781 -19029802 - AluJb SINE Alu -12 300 1 23 0 0 0 chr2 234226986 234227009 -19029574 + AT_rich Low_complexity Low_complexity 1 23 0 239 109 18 55 chr2 234227135 234227174 -19029409 - L1MB4 LINE L1 -3 6177 6139 484 104 13 0 chr2 234227174 234227251 -19029332 - L1PB3 LINE L1 0 6154 6077 239 109 18 55 chr2 234227251 234227266 -19029317 - L1MB4 LINE L1 -41 6139 6125 1294 106 6 6 chr2 234227268 234227447 -19029136 - AluSg/x SINE Alu -16 296 118 2244 114 3 3 chr2 234227456 234227763 -19028820 + AluSx SINE Alu 1 307 -5 243 98 24 0 chr2 234227763 234227804 -19028779 - L1M LINE L1 -823 5345 5304 2334 115 0 0 chr2 234228379 234228691 -19027892 - AluSx SINE Alu 0 312 1 1885 146 0 62 chr2 234229094 234229416 -19027167 - AluSx SINE Alu -10 302 1 825 226 52 5 chr2 234229560 234229772 -19026811 - MIR SINE MIR -23 239 18 1895 149 13 10 chr2 234230942 234231243 -19025340 - AluJo SINE Alu -10 302 1 654 189 9 69 chr2 234231883 234232005 -19024578 - MER6 DNA MER2_type -3 862 734 1685 184 11 0 chr2 234232005 234232287 -19024296 + AluJb SINE Alu 9 293 -19 654 189 9 69 chr2 234232287 234232389 -19024194 - MER6 DNA MER2_type -131 734 -65 2006 127 11 11 chr2 234233020 234233304 -19023279 + AluSx SINE Alu 6 289 -23 2416 94 3 0 chr2 234233496 234233804 -19022779 + AluSx SINE Alu 1 309 -3 1851 163 0 20 chr2 234234304 234234604 -19021979 + AluSx SINE Alu 1 294 -18 2300 104 0 3 chr2 234234725 234235023 -19021560 - AluSx SINE Alu -15 297 1 21 0 0 0 chr2 234235767 234235788 -19020795 + AT_rich Low_complexity Low_complexity 1 21 0 273 57 0 0 chr2 234237307 234237342 -19019241 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 2068 114 0 11 chr2 234237342 234237623 -19018960 - AluSg SINE Alu -32 278 1 252 296 86 37 chr2 234238038 234238200 -19018383 - MIR3 SINE MIR -9 199 30 1876 140 34 17 chr2 234238276 234238569 -19018014 + AluJo SINE Alu 1 298 -14 2299 95 3 0 chr2 234238571 234238900 -19017683 + AluSp SINE Alu 1 330 0 5847 141 16 25 chr2 234238907 234240060 -19016523 + L1MA8 LINE L1 5144 6289 -2 1539 185 40 37 chr2 234240174 234240471 -19016112 - AluJb SINE Alu -14 298 1 1948 120 25 0 chr2 234240719 234241003 -19015580 - AluSx SINE Alu -21 291 1 2534 49 0 13 chr2 234241196 234241502 -19015081 + AluY SINE Alu 1 302 -9 2063 125 3 0 chr2 234241904 234242192 -19014391 + AluSx SINE Alu 2 290 -22 2219 124 0 0 chr2 234242482 234242781 -19013802 + AluSx SINE Alu 4 302 -10 1155 162 0 0 chr2 234242820 234242993 -19013590 - AluSg/x SINE Alu -10 302 130 2018 147 0 10 chr2 234243555 234243854 -19012729 - AluSx SINE Alu -16 296 1 2186 107 3 0 chr2 234243968 234244258 -19012325 + AluSq SINE Alu 23 313 0 1357 104 0 0 chr2 234244461 234244634 -19011949 - AluSg/x SINE Alu -11 301 129 184 228 53 18 chr2 234244795 234244852 -19011731 + L2 LINE L2 3142 3200 -72 789 176 16 72 chr2 234244871 234245003 -19011580 + MER45A DNA AcHobo 1 121 -1460 2161 108 20 0 chr2 234245003 234245299 -19011284 - AluSg1 SINE Alu -7 302 1 789 176 16 72 chr2 234245299 234245354 -19011229 + MER45A DNA AcHobo 121 178 0 465 231 0 0 chr2 234245429 234245507 -19011076 + MER58A DNA MER1_type 4 81 -26 1049 123 0 0 chr2 234245510 234245648 -19010935 + AluSq/x SINE Alu 1 138 -174 563 108 0 10 chr2 234245648 234245804 -19010779 + AluSp SINE Alu 39 250 -63 1407 146 4 4 chr2 234245804 234246030 -19010553 + AluSg/x SINE Alu 83 308 -2 707 211 49 0 chr2 234246030 234246172 -19010411 + MER58A DNA MER1_type 76 224 0 2411 100 0 0 chr2 234246362 234246663 -19009920 + AluSx SINE Alu 1 301 -11 538 125 205 18 chr2 234247189 234247301 -19009282 - FLAM_C SINE Alu 0 133 1 1819 176 3 10 chr2 234247303 234247598 -19008985 - AluJb SINE Alu -19 293 1 2486 69 0 3 chr2 234247959 234248263 -19008320 + AluY SINE Alu 1 303 -8 441 0 0 0 chr2 234248300 234248349 -19008234 + (TG)n Simple_repeat Simple_repeat 2 50 0 189 0 0 0 chr2 234248517 234248538 -19008045 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 264 59 0 0 chr2 234248956 234248990 -19007593 + (T)n Simple_repeat Simple_repeat 1 34 0 387 0 0 0 chr2 234249406 234249449 -19007134 + (CATA)n Simple_repeat Simple_repeat 2 44 0 475 149 206 21 chr2 234250009 234250047 -19006536 - Charlie1b DNA MER1_type -2238 523 493 1875 95 4 0 chr2 234250047 234250322 -19006261 - AluSp SINE Alu 0 326 51 475 149 206 21 chr2 234250322 234250423 -19006160 - Charlie1b DNA MER1_type -2268 493 357 1162 173 18 18 chr2 234250426 234250475 -19006108 + AluJo SINE Alu 89 137 -175 1442 229 7 0 chr2 234250475 234250775 -19005808 + AluJb SINE Alu 3 304 0 1162 173 18 18 chr2 234250775 234250944 -19005639 + AluJo SINE Alu 136 308 -4 1806 188 11 14 chr2 234250945 234251306 -19005277 - Charlie1b DNA MER1_type -163 360 1 384 180 67 0 chr2 234251306 234251395 -19005188 - MIR SINE MIR -91 171 77 2358 96 0 0 chr2 234251540 234251832 -19004751 + AluSg SINE Alu 2 293 -17 2241 68 43 0 chr2 234252623 234252904 -19003679 + AluSx SINE Alu 2 294 -18 278 309 32 8 chr2 234253255 234253381 -19003202 + L2 LINE L2 3144 3272 0 22 0 0 0 chr2 234253384 234253406 -19003177 + GC_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr2 234253503 234253540 -19003043 + GC_rich Low_complexity Low_complexity 1 37 0 271 223 0 21 chr2 234253831 234253925 -19002658 + CT-rich Low_complexity Low_complexity 1 92 0 823 150 0 7 chr2 234254386 234254582 -19002001 - AluSg/x SINE Alu 0 331 137 2006 113 39 7 chr2 234254870 234255153 -19001430 + AluSx SINE Alu 1 292 -20 375 281 157 14 chr2 234255281 234255562 -19001021 - L2 LINE L2 -3 3310 2990 1943 122 51 0 chr2 234256088 234256384 -19000199 + AluSx SINE Alu 1 311 -1 2153 106 23 10 chr2 234256445 234256748 -18999835 + AluSq SINE Alu 1 307 -6 794 166 0 29 chr2 234257099 234257238 -18999345 + FLAM_C SINE Alu 2 136 -7 735 177 0 16 chr2 234257444 234257568 -18999015 - FLAM_C SINE Alu -20 123 2 264 113 75 0 chr2 234258362 234258415 -18998168 - L1ME4a LINE L1 -5 6116 6060 2087 148 7 0 chr2 234258439 234258749 -18997834 + AluSq SINE Alu 1 312 -1 2026 135 3 3 chr2 234258774 234259070 -18997513 + AluSx SINE Alu 1 296 -16 449 211 32 32 chr2 234259071 234259194 -18997389 - LTR48 LTR ERV1 -173 614 492 1478 122 31 9 chr2 234259338 234259560 -18997023 - AluSq SINE Alu -86 227 1 1946 123 4 7 chr2 234259593 234259896 -18996687 + AluSx SINE Alu 16 317 0 2377 97 0 0 chr2 234260349 234260657 -18995926 + AluSq SINE Alu 1 308 -5 225 300 0 12 chr2 234260778 234260858 -18995725 + MIR SINE MIR 103 181 -81 23 0 0 0 chr2 234261507 234261530 -18995053 + AT_rich Low_complexity Low_complexity 1 23 0 2144 109 0 0 chr2 234262607 234262938 -18993645 + AluSq SINE Alu 1 331 0 792 173 0 23 chr2 234264083 234264216 -18992367 + FLAM_C SINE Alu 1 130 -3 290 300 18 9 chr2 234265152 234265262 -18991321 + MIR SINE MIR 37 147 -61 272 298 0 61 chr2 234265313 234265427 -18991156 + MIR SINE MIR 26 132 -130 255 270 147 31 chr2 234265472 234265635 -18990948 + L2 LINE L2 3090 3271 -42 2167 117 3 7 chr2 234265638 234265937 -18990646 + AluSx SINE Alu 1 298 -14 2158 99 3 7 chr2 234266626 234266950 -18989633 - AluSq SINE Alu 0 313 1 1994 157 0 7 chr2 234267223 234267523 -18989060 - AluSx SINE Alu -14 298 1 849 109 0 0 chr2 234267796 234267906 -18988677 + FLAM_C SINE Alu 11 120 -23 2392 91 3 0 chr2 234268210 234268507 -18988076 + AluSp SINE Alu 1 298 -15 853 166 140 0 chr2 234268693 234268801 -18987782 - AluJb SINE Alu -59 253 161 297 0 0 0 chr2 234268801 234268834 -18987749 + (TA)n Simple_repeat Simple_repeat 2 34 0 * 450 0 0 0 chr2 234268833 234268883 -18987700 + (GA)n Simple_repeat Simple_repeat 2 51 0 853 166 140 0 chr2 234268834 234268882 -18987701 - AluJb SINE Alu -151 161 121 360 0 0 0 chr2 234268882 234268922 -18987661 + (TG)n Simple_repeat Simple_repeat 2 41 0 853 166 140 0 chr2 234268922 234268970 -18987613 - AluJb SINE Alu -191 121 75 1511 155 8 27 chr2 234268997 234269255 -18987328 - AluJo SINE Alu -59 253 1 2574 139 17 36 chr2 234269306 234269774 -18986809 - L1PA16 LINE L1 0 6166 5708 813 153 0 0 chr2 234269978 234270096 -18986487 + FLAM_C SINE Alu 1 118 -25 182 36 0 36 chr2 234270101 234270129 -18986454 + (TAA)n Simple_repeat Simple_repeat 2 28 0 403 275 29 91 chr2 234270385 234270536 -18986047 - L3b LINE CR1 -201 1382 1254 2218 120 0 3 chr2 234270536 234270837 -18985746 - AluSx SINE Alu -12 300 1 403 275 29 91 chr2 234270837 234270961 -18985622 - L3b LINE CR1 -329 1254 1124 820 164 0 8 chr2 234273241 234273369 -18983214 + FLAM_C SINE Alu 1 127 -16 29 0 0 0 chr2 234273369 234273398 -18983185 + AT_rich Low_complexity Low_complexity 1 29 0 343 230 206 23 chr2 234273519 234273587 -18982996 + L1ME4a LINE L1 5817 5871 -250 2245 105 13 3 chr2 234273587 234273891 -18982692 + AluSq SINE Alu 1 307 -6 343 230 206 23 chr2 234273891 234274079 -18982504 + L1ME4a LINE L1 5871 6120 -1 884 140 6 41 chr2 234274250 234274421 -18982162 + L1MC1 LINE L1 5971 6135 -198 285 111 16 63 chr2 234274414 234274477 -18982106 + L1PA16 LINE L1 6107 6166 0 * 987 167 6 6 chr2 234274499 234274661 -18981922 + L1MC1 LINE L1 6163 6324 -9 742 174 30 15 chr2 234274998 234275130 -18981453 + AluJo SINE Alu 3 136 -176 1814 155 52 10 chr2 234275159 234275450 -18981133 + AluJb SINE Alu 1 303 -9 2699 117 36 14 chr2 234275451 234275870 -18980713 + MSTA LTR MaLR 1 428 0 1881 131 53 18 chr2 234276488 234276771 -18979812 - AluSx SINE Alu -19 293 1 1636 151 8 0 chr2 234276920 234277171 -18979412 - AluJb SINE Alu -59 253 1 1147 154 62 154 chr2 234277207 234277531 -18979052 + MLT1A1 LTR MaLR 1 283 -82 2321 99 0 7 chr2 234277531 234277833 -18978750 - AluSc SINE Alu -7 302 3 1147 154 62 154 chr2 234277833 234277910 -18978673 + MLT1A1 LTR MaLR 283 365 0 352 301 33 22 chr2 234277967 234278150 -18978433 - L2 LINE L2 -12 3301 3117 780 261 76 81 chr2 234278239 234278412 -18978171 + MLT1K LTR MaLR 94 266 -322 2331 110 0 0 chr2 234278412 234278711 -18977872 + AluSx SINE Alu 1 299 -13 780 261 76 81 chr2 234278711 234278959 -18977624 + MLT1K LTR MaLR 266 513 -75 2228 116 0 0 chr2 234279318 234279611 -18976972 + AluSx SINE Alu 1 293 -19 330 283 42 25 chr2 234279643 234279763 -18976820 - L2 LINE L2 -628 2686 2565 2170 104 3 13 chr2 234279809 234280108 -18976475 - AluSx SINE Alu -16 296 1 406 200 0 27 chr2 234280396 234280471 -18976112 - AluJ/FRAM SINE Alu -9 293 221 685 228 82 65 chr2 234280602 234280958 -18975625 + L2 LINE L2 1816 2177 -1137 4941 104 31 30 chr2 234281095 234281873 -18974710 - MER4E LTR ERV1 0 779 1 2343 130 34 14 chr2 234282768 234283123 -18973460 - THE1B LTR MaLR -2 362 1 2128 147 14 27 chr2 234283173 234283540 -18973043 + THE1B LTR MaLR 3 364 0 11587 91 25 4 chr2 234283540 234285087 -18971496 + THE1B-int LTR MaLR 1 1580 0 2359 124 8 24 chr2 234285087 234285457 -18971126 + THE1B LTR MaLR 1 364 0 1742 160 11 11 chr2 234285535 234285817 -18970766 - AluSx SINE Alu -29 283 2 1583 177 13 36 chr2 234285877 234286182 -18970401 - AluJb SINE Alu -14 298 1 2252 117 0 19 chr2 234286805 234287122 -18969461 + AluSx SINE Alu 1 311 -1 507 255 26 13 chr2 234287716 234287869 -18968714 + MIR SINE MIR 32 186 -76 2232 123 0 0 chr2 234287919 234288227 -18968356 - AluSx SINE Alu 0 312 5 2052 146 33 0 chr2 234288232 234288568 -18968015 + MER41B LTR ERV1 3 349 -286 1641 167 37 7 chr2 234288628 234288922 -18967661 + MER41B LTR ERV1 333 635 0 2028 142 3 7 chr2 234289066 234289369 -18967214 + AluSx SINE Alu 1 302 -10 755 158 0 43 chr2 234289665 234289804 -18966779 + FLAM_C SINE Alu 9 141 -2 324 301 68 15 chr2 234290160 234290293 -18966290 - MIR SINE MIR -110 152 13 639 245 6 6 chr2 234290649 234290812 -18965771 + MIR SINE MIR 90 252 -10 1821 156 0 28 chr2 234290821 234291110 -18965473 + AluJb SINE Alu 1 281 -31 2225 89 4 4 chr2 234291113 234291417 -18965166 - AluSc SINE Alu 0 304 1 22 0 0 0 chr2 234291513 234291535 -18965048 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr2 234291873 234291899 -18964684 + AT_rich Low_complexity Low_complexity 1 26 0 329 324 0 19 chr2 234291979 234292037 -18964546 - L2 LINE L2 -8 3305 3248 3047 101 26 5 chr2 234292037 234292462 -18964121 + MER57B LTR ERV1 1 434 0 329 324 0 19 chr2 234292462 234292511 -18964072 - L2 LINE L2 -65 3248 3200 1150 90 0 96 chr2 234292511 234292727 -18963856 + AluSp SINE Alu 125 323 0 1775 184 0 7 chr2 234293087 234293375 -18963208 - AluJb SINE Alu -26 286 1 2340 84 7 0 chr2 234293660 234293956 -18962627 - AluSp SINE Alu -15 298 1 246 81 0 0 chr2 234294267 234294304 -18962279 - AluSq SINE Alu -2 300 264 1249 70 128 0 chr2 234294304 234294476 -18962107 + AluSg/x SINE Alu 106 299 -11 1923 167 3 0 chr2 234294746 234295046 -18961537 - AluJo SINE Alu -11 301 1 300 276 16 55 chr2 234295341 234295468 -18961115 - MIR SINE MIR -121 141 20 286 274 0 11 chr2 234295595 234295690 -18960893 + MIR SINE MIR 124 217 -45 2170 122 3 0 chr2 234295931 234296218 -18960365 - AluSq SINE Alu -25 288 1 220 27 54 0 chr2 234296219 234296256 -18960327 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 969 168 6 24 chr2 234296256 234296423 -18960160 - AluSg/x SINE Alu -28 284 121 2430 90 3 3 chr2 234296477 234296788 -18959795 - AluSp SINE Alu -2 311 1 243 250 0 0 chr2 234296789 234296841 -18959742 - THE1C LTR MaLR -1 427 376 * 1355 153 14 9 chr2 234296838 234297061 -18959522 - THE1C LTR MaLR -151 224 1 1794 105 0 0 chr2 234297119 234297348 -18959235 - AluSc SINE Alu -80 229 1 27 73 0 0 chr2 234297833 234297888 -18958695 + AT_rich Low_complexity Low_complexity 1 55 0 2077 140 0 3 chr2 234298159 234298459 -18958124 + AluJb SINE Alu 3 301 -11 519 151 0 0 chr2 234298490 234298590 -18957993 - AluSc SINE Alu 0 308 209 858 93 0 0 chr2 234298594 234298701 -18957882 - AluSq/x SINE Alu -206 107 1 236 151 0 19 chr2 234298755 234298808 -18957775 + CT-rich Low_complexity Low_complexity 3 54 0 2696 205 59 47 chr2 234298809 234299555 -18957028 + L1MC4 LINE L1 6406 7160 -882 917 171 18 6 chr2 234299555 234299725 -18956858 + AluJb SINE Alu 130 301 -11 742 181 0 0 chr2 234299732 234299848 -18956735 + FLAM_C SINE Alu 1 116 -17 485 238 87 0 chr2 234299932 234300058 -18956525 - MER96 DNA MER1_type? 0 175 39 865 208 0 22 chr2 234300269 234300555 -18956028 - AluJb SINE Alu 0 418 137 26 74 0 0 chr2 234300877 234300931 -18955652 + AT_rich Low_complexity Low_complexity 1 54 0 1644 142 63 0 chr2 234301314 234301568 -18955015 + AluJo SINE Alu 1 270 -42 270 0 0 0 chr2 234301580 234301610 -18954973 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 192 256 156 11 chr2 234301675 234301765 -18954818 + MIR SINE MIR 7 109 -153 986 225 134 66 chr2 234301852 234302339 -18954244 - MLT1F LTR MaLR -13 529 77 2335 78 0 50 chr2 234302339 234302659 -18953924 + AluY SINE Alu 1 304 -7 1532 177 40 57 chr2 234302667 234302967 -18953616 + AluJo SINE Alu 1 295 -17 986 225 134 66 chr2 234302967 234303001 -18953582 - MLT1F LTR MaLR -471 71 1 229 158 0 0 chr2 234303350 234303388 -18953195 - L2 LINE L2 -18 3295 3258 341 275 215 9 chr2 234303434 234303667 -18952916 - L2 LINE L2 -410 2904 2624 2465 87 0 0 chr2 234303679 234303977 -18952606 - AluSg SINE Alu -12 298 1 2025 146 73 36 chr2 234303977 234304504 -18952079 + MLT2A2 LTR ERVL 4 554 0 181 246 64 27 chr2 234304519 234304629 -18951954 - L2 LINE L2 -713 2601 2488 1975 162 0 0 chr2 234304759 234305081 -18951502 + AluSx SINE Alu 1 322 0 2088 126 3 0 chr2 234305631 234305924 -18950659 - AluSx SINE Alu -18 294 1 2099 125 14 0 chr2 234306369 234306665 -18949918 + AluSx SINE Alu 1 300 -12 3877 54 0 0 chr2 234306685 234307149 -18949434 + L1PA7 LINE L1 5678 6141 -13 335 261 35 14 chr2 234307446 234307588 -18948995 + L1ME4a LINE L1 5592 5736 -385 315 261 45 11 chr2 234307950 234308038 -18948545 - MLT1I LTR MaLR -270 139 49 239 299 111 9 chr2 234308065 234308282 -18948301 + L1ME4a LINE L1 5801 6039 -82 2234 92 23 3 chr2 234308322 234308628 -18947955 - AluSq SINE Alu -1 312 1 318 280 152 0 chr2 234309028 234309153 -18947430 + MIR SINE MIR 119 262 0 1877 153 0 10 chr2 234312759 234313053 -18943530 + AluJb SINE Alu 1 291 -21 23 78 0 0 chr2 234313123 234313174 -18943409 + AT_rich Low_complexity Low_complexity 1 51 0 1708 182 3 14 chr2 234313231 234313528 -18943055 + AluJb SINE Alu 1 294 -18 2274 119 0 0 chr2 234314182 234314485 -18942098 + AluSx SINE Alu 1 303 -9 2287 96 7 0 chr2 234315365 234315667 -18940916 + AluSx SINE Alu 1 304 -8 2293 98 0 0 chr2 234315975 234316270 -18940313 - AluSg SINE Alu -15 295 1 1863 164 0 17 chr2 234316587 234316886 -18939697 - AluJb SINE Alu -18 294 1 885 182 0 0 chr2 234316910 234317042 -18939541 - FLAM_C SINE Alu -1 132 1 24 32 0 0 chr2 234317480 234317511 -18939072 + AT_rich Low_complexity Low_complexity 1 31 0 2263 99 0 0 chr2 234317511 234317803 -18938780 - AluSx SINE Alu -20 292 1 22 0 0 0 chr2 234317988 234318010 -18938573 + AT_rich Low_complexity Low_complexity 1 22 0 1604 137 137 4 chr2 234318705 234318975 -18937608 - AluSg SINE Alu -4 306 1 1772 167 3 24 chr2 234319060 234319354 -18937229 - AluJb SINE Alu -24 288 1 188 208 42 21 chr2 234319823 234319871 -18936712 + L2 LINE L2 3256 3304 -9 2143 104 18 4 chr2 234319919 234320223 -18936360 + AluSx SINE Alu 1 308 0 2165 104 3 19 chr2 234320300 234320607 -18935976 + AluSq SINE Alu 1 302 -11 28 29 0 0 chr2 234320659 234320694 -18935889 + AT_rich Low_complexity Low_complexity 1 35 0 1564 158 58 7 chr2 234321947 234322225 -18934358 - AluJb SINE Alu -20 292 1 2355 90 3 3 chr2 234322444 234322745 -18933838 - AluSq SINE Alu -12 301 1 2252 123 0 0 chr2 234322759 234323061 -18933522 - AluSx SINE Alu -10 302 1 962 203 29 62 chr2 234323097 234323234 -18933349 + MIR SINE MIR 6 133 -129 2646 109 25 6 chr2 234323234 234323591 -18932992 + THE1B LTR MaLR 1 364 0 962 203 29 62 chr2 234323591 234323695 -18932888 + MIR SINE MIR 133 239 -23 372 276 120 25 chr2 234323699 234323912 -18932671 - MIR SINE MIR -29 233 3 1641 132 0 0 chr2 234324047 234324275 -18932308 + AluSx SINE Alu 1 228 -84 2087 119 0 23 chr2 234324951 234325253 -18931330 + AluSx SINE Alu 1 295 -17 21 0 0 0 chr2 234325821 234325842 -18930741 + AT_rich Low_complexity Low_complexity 1 21 0 2102 105 11 3 chr2 234325846 234326132 -18930451 - AluSq SINE Alu -25 288 1 453 271 29 18 chr2 234326919 234327089 -18929494 + L1ME LINE L1 5558 5729 -392 1773 160 0 43 chr2 234327099 234327399 -18929184 + AluJo SINE Alu 8 294 -18 440 322 7 27 chr2 234327440 234327589 -18928994 - MIR3 SINE MIR -23 185 40 186 71 0 0 chr2 234328608 234328636 -18927947 + (CA)n Simple_repeat Simple_repeat 1 28 0 210 37 0 0 chr2 234329140 234329167 -18927416 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2218 114 10 3 chr2 234329733 234330041 -18926542 + AluSx SINE Alu 1 310 -2 2452 150 52 33 chr2 234331172 234331209 -18925374 + MSTA LTR MaLR 1 36 -392 360 0 0 0 chr2 234331209 234331249 -18925334 + (TA)n Simple_repeat Simple_repeat 2 41 0 2075 101 10 14 chr2 234331249 234331537 -18925046 - AluSx SINE Alu -25 287 1 2452 150 52 33 chr2 234331537 234331918 -18924665 + MSTA LTR MaLR 35 428 0 1928 150 3 20 chr2 234332251 234332557 -18924026 - AluSx SINE Alu -6 306 6 269 289 10 52 chr2 234333159 234333256 -18923327 - L2 LINE L2 0 3272 3180 2240 117 0 13 chr2 234333320 234333636 -18922947 + AluSx SINE Alu 1 312 0 510 118 0 59 chr2 234334847 234334932 -18921651 + MADE1 DNA Mariner 1 80 0 193 344 0 16 chr2 234335880 234335941 -18920642 + L2 LINE L2 3253 3312 -1 1836 149 0 17 chr2 234336137 234336439 -18920144 + AluJo SINE Alu 1 297 -15 189 306 61 10 chr2 234336513 234336611 -18919972 - MIR SINE MIR -48 214 112 51 0 0 0 chr2 234336611 234336662 -18919921 + AT_rich Low_complexity Low_complexity 1 51 0 2018 115 0 7 chr2 234337097 234337408 -18919175 + AluSx SINE Alu 1 309 0 1441 173 119 29 chr2 234337500 234337777 -18918806 - AluJo SINE Alu 0 302 1 2127 114 0 3 chr2 234338119 234338409 -18918174 - AluSx SINE Alu -21 291 3 276 293 40 40 chr2 234339030 234339180 -18917403 + L1ME LINE L1 5514 5663 -458 781 173 8 30 chr2 234339232 234339365 -18917218 + FLAM_C SINE Alu 1 130 -3 219 311 9 19 chr2 234339415 234339521 -18917062 + (CATATA)n Simple_repeat Simple_repeat 4 108 0 225 242 16 0 chr2 234339545 234339607 -18916976 + L1ME LINE L1 5724 5786 -335 1923 103 84 0 chr2 234340393 234340678 -18915905 - AluSq SINE Alu 0 307 1 2033 129 0 7 chr2 234340802 234341135 -18915448 - AluSx SINE Alu 0 331 1 1820 169 17 3 chr2 234341712 234342014 -18914569 - AluJb SINE Alu -6 306 1 183 353 153 20 chr2 234342086 234342898 -18913685 + L2 LINE L2 1750 2669 -645 368 264 18 36 chr2 234342998 234343108 -18913475 - MER5A DNA MER1_type -32 157 50 205 270 67 56 chr2 234343028 234343117 -18913466 + MER5B DNA MER1_type 59 148 -30 * 957 317 138 14 chr2 234343194 234343884 -18912699 + L2 LINE L2 2064 2838 -476 4361 168 54 45 chr2 234343981 234345284 -18911299 + L1MB7 LINE L1 4860 6169 -15 274 253 107 0 chr2 234345315 234345390 -18911193 + MER5C DNA MER1_type 242 324 0 450 0 0 0 chr2 234345425 234345475 -18911108 + (CA)n Simple_repeat Simple_repeat 1 50 0 1813 162 10 7 chr2 234345677 234345973 -18910610 - AluJo SINE Alu -15 297 1 915 144 8 0 chr2 234346956 234347088 -18909495 + FLAM_C SINE Alu 1 133 0 2280 109 7 0 chr2 234347852 234348155 -18908428 - AluSx SINE Alu -7 305 1 568 221 41 0 chr2 234348356 234348478 -18908105 + MER58B DNA MER1_type 211 337 -4 261 310 58 0 chr2 234348543 234348630 -18907953 + MIR SINE MIR 94 185 -77 2355 91 3 0 chr2 234350674 234350972 -18905611 - AluSq SINE Alu -14 299 1 2164 114 7 0 chr2 234351440 234351730 -18904853 - AluSx SINE Alu -20 292 1 302 161 27 36 chr2 234352007 234352119 -18904464 + (TA)n Simple_repeat Simple_repeat 1 111 0 2389 84 0 10 chr2 234352205 234352513 -18904070 + AluY SINE Alu 1 305 -6 2209 113 0 0 chr2 234353078 234353369 -18903214 - AluSx SINE Alu -21 291 1 893 220 0 0 chr2 234353373 234353546 -18903037 - AluJb SINE Alu -17 295 123 422 274 95 42 chr2 234354882 234355050 -18901533 + L1ME2 LINE L1 5966 6142 -22 792 199 75 33 chr2 234355176 234355417 -18901166 + L1MC5 LINE L1 7322 7572 -389 1156 114 13 0 chr2 234355456 234355614 -18900969 - FRAM SINE Alu -17 159 1 2480 46 0 0 chr2 234357360 234357643 -18898940 + AluY SINE Alu 23 305 -6 2052 142 0 0 chr2 234358227 234358522 -18898061 - AluSx SINE Alu -17 295 1 13447 113 22 53 chr2 234359115 234360014 -18896569 - Tigger1 DNA MER2_type -8 2410 1484 1349 201 66 7 chr2 234360014 234360288 -18896295 - AluJb SINE Alu -21 291 2 13447 113 22 53 chr2 234360288 234360505 -18896078 - Tigger1 DNA MER2_type -934 1484 1262 255 61 0 0 chr2 234360505 234360538 -18896045 + (TG)n Simple_repeat Simple_repeat 2 34 0 1926 160 0 0 chr2 234360539 234360826 -18895757 - AluSx SINE Alu -25 287 1 13447 113 22 53 chr2 234360826 234362156 -18894427 - Tigger1 DNA MER2_type -1155 1263 24 2387 100 0 0 chr2 234363035 234363346 -18893237 - AluSq SINE Alu -2 311 1 23 0 0 0 chr2 234363500 234363523 -18893060 + AT_rich Low_complexity Low_complexity 1 23 0 1399 217 80 130 chr2 234364071 234364196 -18892387 + MLT1H LTR MaLR 1 131 -418 1925 91 0 4 chr2 234364196 234364450 -18892133 - AluSx SINE Alu -20 292 40 1399 217 80 130 chr2 234364450 234364901 -18891682 + MLT1H LTR MaLR 131 548 -1 2332 113 3 0 chr2 234365535 234365844 -18890739 - AluSx SINE Alu -2 310 1 2571 66 0 0 chr2 234365976 234366280 -18890303 - AluY SINE Alu -7 304 1 864 146 8 0 chr2 234367397 234367527 -18889056 + FLAM_C SINE Alu 1 131 -12 1830 137 10 26 chr2 234367533 234367840 -18888743 + AluJo SINE Alu 1 302 -10 2197 125 0 13 chr2 234367935 234368247 -18888336 - AluSx SINE Alu -2 310 3 2250 114 0 7 chr2 234368372 234368679 -18887904 - AluSq SINE Alu -8 305 1 214 296 28 0 chr2 234368834 234368905 -18887678 - L2 LINE L2 -257 3015 2943 1782 168 16 16 chr2 234369917 234370220 -18886363 - AluSx SINE Alu -9 303 1 2507 178 94 6 chr2 234370430 234370940 -18885643 + MER68 LTR ERV1 1 555 -7 889 219 133 26 chr2 234371302 234371535 -18885048 - MIR SINE MIR 0 262 5 1210 149 0 0 chr2 234372715 234372890 -18883693 - AluSg/x SINE Alu -14 296 122 1126 153 21 32 chr2 234372959 234373148 -18883435 + MER5A DNA MER1_type 3 189 0 954 181 71 38 chr2 234373186 234373306 -18883277 - MER20 DNA MER1_type -2 217 86 2246 147 33 28 chr2 234373306 234373667 -18882916 - THE1B LTR MaLR -1 363 1 954 181 71 38 chr2 234373667 234373756 -18882827 - MER20 DNA MER1_type -133 86 1 1879 86 0 0 chr2 234373909 234374141 -18882442 + AluSg SINE Alu 13 244 -66 327 285 15 73 chr2 234374153 234374290 -18882293 - MER46C DNA MER2_type -198 140 12 199 402 17 8 chr2 234374379 234374496 -18882087 + L2 LINE L2 2670 2787 -527 2257 98 0 41 chr2 234374496 234374678 -18881905 - AluSq SINE Alu -8 305 140 2383 96 3 0 chr2 234374678 234374980 -18881603 - AluSp SINE Alu -10 303 1 2257 98 0 41 chr2 234374980 234375115 -18881468 - AluSq SINE Alu -173 140 1 22 0 0 0 chr2 234375124 234375146 -18881437 + AT_rich Low_complexity Low_complexity 1 22 0 264 133 34 19 chr2 234375515 234375585 -18880998 - Alu SINE Alu -252 48 1 2375 75 3 0 chr2 234376082 234376376 -18880207 - AluY SINE Alu -16 295 1 2863 7 0 0 chr2 234376386 234376693 -18879890 - AluYb8 SINE Alu -11 307 1 2228 102 0 16 chr2 234376758 234377062 -18879521 + AluSx SINE Alu 1 299 -13 186 323 75 11 chr2 234377653 234377746 -18878837 + MIR SINE MIR 48 146 -116 410 225 63 49 chr2 234377867 234378009 -18878574 - MER113 DNA MER1_type? -335 186 43 336 290 116 86 chr2 234378264 234379374 -18877209 - L1M2 LINE L1 -5470 1379 249 390 131 36 36 chr2 234379498 234379582 -18877001 - HsTC2 DNA Tc2 -1812 86 3 628 251 94 55 chr2 234379592 234379750 -18876833 - MIR SINE MIR -17 245 74 2410 183 209 0 chr2 234379750 234380258 -18876325 + MER90 LTR ERV1 1 614 0 628 251 94 55 chr2 234380258 234380334 -18876249 - MIR SINE MIR -188 74 2 1181 192 68 7 chr2 234380366 234380647 -18875936 + MER33 DNA MER1_type 24 321 -3 1972 136 10 7 chr2 234380665 234380966 -18875617 - AluSx SINE Alu 0 312 11 632 259 97 49 chr2 234381141 234381388 -18875195 - L2 LINE L2 -1 3312 3054 844 285 107 3 chr2 234381440 234381777 -18874806 + LTR16A LTR ERVL 79 450 0 1929 251 70 65 chr2 234381777 234382135 -18874448 - L2 LINE L2 -261 3052 2697 2089 120 7 10 chr2 234382135 234382426 -18874157 - AluSx SINE Alu -20 292 3 1929 251 70 65 chr2 234382426 234382810 -18873773 - L2 LINE L2 -616 2697 2316 207 0 0 0 chr2 234382810 234382833 -18873750 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2291 110 0 0 chr2 234382836 234383137 -18873446 - AluSx SINE Alu -11 301 1 1929 251 70 65 chr2 234383137 234383224 -18873359 - L2 LINE L2 -998 2315 2213 1193 269 28 12 chr2 234383484 234383811 -18872772 + MER93a LTR ERV1 63 394 -8 1757 178 0 13 chr2 234383811 234384114 -18872469 - AluSx SINE Alu -13 299 1 1717 160 24 3 chr2 234384117 234384410 -18872173 - AluSx SINE Alu -13 299 1 728 211 58 112 chr2 234384735 234385048 -18871535 - L2 LINE L2 -1089 2225 1930 424 122 14 0 chr2 234385162 234385236 -18871347 - L1PB1 LINE L1 0 6151 6077 2212 110 3 0 chr2 234385339 234385639 -18870944 - AluSx SINE Alu -11 301 1 904 255 150 58 chr2 234385926 234386405 -18870178 + LTR33A LTR ERVL 1 523 0 1795 172 96 32 chr2 234386438 234386815 -18869768 + MER57A LTR ERV1 1 401 -2 2276 112 0 0 chr2 234386992 234387288 -18869295 - AluSg SINE Alu -9 301 6 2355 224 47 34 chr2 234388203 234388738 -18867845 - MLT1F LTR MaLR 0 542 1 261 208 68 32 chr2 234392206 234392294 -18864289 - L1MC/D LINE L1 -507 5614 5532 537 101 38 0 chr2 234392509 234392587 -18863996 - MER2 DNA MER2_type -168 177 97 1084 152 102 0 chr2 234392587 234392784 -18863799 - Tigger1 DNA MER2_type 0 2418 2202 474 152 0 56 chr2 234392773 234392901 -18863682 - Tigger1 DNA MER2_type -2261 157 1 * 605 155 21 10 chr2 234392901 234392998 -18863585 - MER2 DNA MER2_type -247 98 1 301 307 88 26 chr2 234394065 234394179 -18862404 + L2 LINE L2 3151 3271 -1 238 209 45 60 chr2 234394901 234394968 -18861615 - L2 LINE L2 -1 3271 3206 676 219 73 17 chr2 234395280 234395458 -18861125 + MER5A DNA MER1_type 1 188 -1 1679 177 32 0 chr2 234395905 234396188 -18860395 - AluJb SINE Alu -20 292 1 279 0 0 0 chr2 234396299 234396330 -18860253 + (TCCA)n Simple_repeat Simple_repeat 2 32 0 2046 131 0 19 chr2 234396548 234396861 -18859722 - AluSx SINE Alu -4 308 2 1641 183 13 17 chr2 234397022 234397322 -18859261 + AluJo SINE Alu 1 299 -13 24 32 0 0 chr2 234397581 234397612 -18858971 + AT_rich Low_complexity Low_complexity 1 31 0 247 282 106 0 chr2 234398675 234398760 -18857823 + L2 LINE L2 3170 3263 -9 236 304 130 9 chr2 234398765 234398880 -18857703 + L1ME LINE L1 5724 5852 -269 717 176 40 0 chr2 234399722 234399847 -18856736 - FLAM_C SINE Alu -2 141 12 1875 60 23 49 chr2 234399847 234400113 -18856470 + AluY SINE Alu 40 298 -13 2259 114 0 0 chr2 234401095 234401393 -18855190 - AluSx SINE Alu -14 298 1 2203 98 3 10 chr2 234402189 234402484 -18854099 - AluSg SINE Alu -17 293 1 2152 165 69 38 chr2 234402668 234403087 -18853496 + Tigger2a DNA MER2_type 2 433 -1 189 74 0 0 chr2 234403404 234403431 -18853152 + (C)n Simple_repeat Simple_repeat 1 27 0 675 193 26 0 chr2 234405405 234405519 -18851064 + FLAM_C SINE Alu 2 118 -25 647 146 209 0 chr2 234406016 234406126 -18850457 - FLAM_C SINE Alu 0 133 1 1276 158 8 42 chr2 234407136 234407376 -18849207 + AluJo SINE Alu 47 278 -34 592 185 126 8 chr2 234407479 234407598 -18848985 + FLAM_C SINE Alu 1 133 0 2400 90 0 0 chr2 234407833 234408133 -18848450 + AluSx SINE Alu 3 302 -10 787 182 8 0 chr2 234408409 234408541 -18848042 + FLAM_C SINE Alu 10 142 -1 201 108 0 0 chr2 234408577 234408614 -18847969 + (A)n Simple_repeat Simple_repeat 1 37 0 219 36 0 0 chr2 234409180 234409208 -18847375 + (CAA)n Simple_repeat Simple_repeat 2 29 0 910 218 34 19 chr2 234409876 234410011 -18846572 + MER3 DNA MER1_type 1 142 -67 2205 116 0 3 chr2 234410011 234410312 -18846271 - AluSx SINE Alu -12 300 1 910 218 34 19 chr2 234410312 234410382 -18846201 + MER3 DNA MER1_type 142 209 0 238 326 62 7 chr2 234410466 234410610 -18845973 - MIR SINE MIR 0 262 111 2010 162 61 17 chr2 234410693 234411052 -18845531 + THE1C LTR MaLR 1 375 0 222 200 31 138 chr2 234411722 234411852 -18844731 + MIR SINE MIR 147 262 0 2284 94 10 0 chr2 234411901 234412189 -18844394 - AluSx SINE Alu -21 291 1 1338 166 130 52 chr2 234412643 234413005 -18843578 + MLT1B LTR MaLR 1 390 0 783 151 8 0 chr2 234413027 234413146 -18843437 + MER45A DNA AcHobo 59 178 0 892 235 36 23 chr2 234413719 234413940 -18842643 + MER58A DNA MER1_type 1 224 0 183 312 16 56 chr2 234413986 234414111 -18842472 + L2 LINE L2 3153 3272 0 353 200 13 13 chr2 234414655 234414730 -18841853 - MIR SINE MIR -68 140 66 423 216 10 0 chr2 234415264 234415361 -18841222 - MER5A DNA MER1_type -83 106 9 2479 122 12 20 chr2 234415945 234416346 -18840237 + L1PB3 LINE L1 5757 6154 0 2167 120 0 3 chr2 234417121 234417413 -18839170 - AluSg SINE Alu -19 291 1 207 0 0 0 chr2 234417555 234417578 -18839005 + (CA)n Simple_repeat Simple_repeat 1 23 0 309 51 0 0 chr2 234417587 234417626 -18838957 + (TG)n Simple_repeat Simple_repeat 2 40 0 613 240 34 77 chr2 234419162 234419395 -18837188 - L1MA9 LINE L1 0 6291 6069 202 232 85 49 chr2 234419523 234419605 -18836978 - MIR SINE MIR -119 143 59 211 281 0 0 chr2 234419961 234420018 -18836565 + GA-rich Low_complexity Low_complexity 1 57 0 556 312 50 0 chr2 234420896 234421098 -18835485 + MIR SINE MIR 25 236 -26 1647 180 3 10 chr2 234422038 234422327 -18834256 - AluJo SINE Alu -20 292 6 180 326 58 0 chr2 234422363 234422449 -18834134 - L2 LINE L2 -989 2325 2235 254 219 83 31 chr2 234422554 234422650 -18833933 + L1MC/D LINE L1 5627 5727 -2081 706 294 119 11 chr2 234423680 234424058 -18832525 - LTR33 LTR ERVL -3 518 100 1821 177 0 0 chr2 234424556 234424844 -18831739 + AluJb SINE Alu 1 288 -24 245 314 51 8 chr2 234425190 234425308 -18831275 - L1MC/D LINE L1 -2267 5541 5419 1088 102 12 6 chr2 234426520 234426686 -18829897 + L1MA5 LINE L1 6134 6300 0 1945 139 0 41 chr2 234426692 234427008 -18829575 + AluJo SINE Alu 3 305 -7 345 47 0 0 chr2 234427391 234427434 -18829149 + (TG)n Simple_repeat Simple_repeat 2 44 0 224 100 25 0 chr2 234428318 234428358 -18828225 + (TCCA)n Simple_repeat Simple_repeat 2 42 0 755 235 26 81 chr2 234428603 234428875 -18827708 - MIR SINE MIR 0 262 6 2339 243 47 51 chr2 234429256 234429961 -18826622 + MER20B DNA MER1_type 82 783 0 225 313 52 17 chr2 234430452 234430567 -18826016 - MER5A DNA MER1_type -67 122 4 2028 148 0 7 chr2 234430655 234430960 -18825623 + AluJo SINE Alu 1 303 -9 2210 122 3 0 chr2 234431069 234431380 -18825203 - AluSx SINE Alu 0 312 1 1783 162 14 3 chr2 234432296 234432586 -18823997 + AluJb SINE Alu 1 293 -19 3498 53 12 0 chr2 234434394 234434826 -18821757 - L1PA8 LINE L1 -15 6157 5721 920 255 124 10 chr2 234434827 234435133 -18821450 - L1MD2 LINE L1 -13 6346 6006 21 0 0 0 chr2 234435796 234435817 -18820766 + AT_rich Low_complexity Low_complexity 1 21 0 2200 130 0 0 chr2 234435838 234436137 -18820446 - AluSx SINE Alu -13 299 1 1782 141 39 29 chr2 234436346 234436652 -18819931 - AluSx SINE Alu -3 309 1 728 294 100 34 chr2 234436681 234437243 -18819340 - L2 LINE L2 -1 3312 2722 26 30 0 0 chr2 234437310 234437343 -18819240 + AT_rich Low_complexity Low_complexity 1 33 0 489 45 72 9 chr2 234438847 234438958 -18817625 + (TA)n Simple_repeat Simple_repeat 1 118 0 289 266 142 52 chr2 234440544 234440777 -18815806 + Charlie8 DNA MER1_type 19 272 -2145 1029 212 149 63 chr2 234441219 234441770 -18814813 - L1MC5 LINE L1 -34 7927 7330 278 120 60 0 chr2 234441770 234441820 -18814763 + MER58B DNA MER1_type 1 53 -288 * 487 234 55 69 chr2 234441807 234441952 -18814631 + MER58B DNA MER1_type 197 339 -2 1635 228 52 62 chr2 234441957 234442585 -18813998 - L1MC5 LINE L1 -627 7334 6713 2053 156 0 0 chr2 234443273 234443580 -18813003 + AluSx SINE Alu 1 307 -5 295 330 76 35 chr2 234444463 234444660 -18811923 + MIR SINE MIR 52 256 -6 333 272 84 37 chr2 234445494 234445685 -18810898 + L1ME4a LINE L1 5536 5735 -386 588 220 66 16 chr2 234445962 234446144 -18810439 + LTR16A1 LTR ERVL 265 455 -2 313 275 87 20 chr2 234446144 234446293 -18810290 + L1ME4a LINE L1 5746 5904 -217 1404 71 0 0 chr2 234446311 234446479 -18810104 + AluYa5 SINE Alu 130 297 -14 258 285 108 8 chr2 234446480 234446610 -18809973 + L1ME4a LINE L1 5949 6091 -30 217 296 0 0 chr2 234446974 234447028 -18809555 + L2 LINE L2 3203 3256 -16 2051 148 3 0 chr2 234447953 234448263 -18808320 + AluSx SINE Alu 1 311 -1 236 212 197 0 chr2 234448444 234448510 -18808073 - MER20 DNA MER1_type 0 219 141 195 314 29 10 chr2 234448661 234448763 -18807820 - L2 LINE L2 -1 3312 3209 450 173 8 90 chr2 234448786 234448919 -18807664 + MER20 DNA MER1_type 4 125 -94 * 592 154 13 74 chr2 234448906 234449055 -18807528 + MER20 DNA MER1_type 80 219 0 5240 178 42 56 chr2 234449618 234450078 -18806505 + L1MD2 LINE L1 5102 5567 -792 2295 102 0 20 chr2 234450078 234450383 -18806200 + AluSq SINE Alu 1 299 -14 5240 178 42 56 chr2 234450383 234451180 -18805403 + L1MD2 LINE L1 5567 6343 -16 505 352 15 0 chr2 234451446 234451642 -18804941 + MIR SINE MIR 27 225 -37 31 0 0 0 chr2 234452451 234452482 -18804101 + AT_rich Low_complexity Low_complexity 1 31 0 1362 154 7 77 chr2 234452940 234453239 -18803344 - MER44D DNA MER2_type -8 601 54 28 0 0 0 chr2 234453611 234453639 -18802944 + AT_rich Low_complexity Low_complexity 1 28 0 959 217 28 23 chr2 234453659 234453876 -18802707 - MER20 DNA MER1_type 0 219 2 2031 139 7 13 chr2 234455607 234455738 -18800845 + AluSx SINE Alu 4 134 -178 2694 52 0 0 chr2 234455738 234456043 -18800540 + AluY SINE Alu 1 305 -6 2031 139 7 13 chr2 234456043 234456213 -18800370 + AluSx SINE Alu 134 303 -9 2171 132 16 24 chr2 234456608 234456986 -18799597 + THE1C LTR MaLR 1 375 0 241 257 0 95 chr2 234458437 234458542 -18798041 + MIR SINE MIR 92 186 -76 1004 296 70 28 chr2 234459764 234460190 -18796393 + MLT1J1 LTR MaLR 3 446 0 318 190 127 0 chr2 234461471 234461550 -18795033 - MER97a DNA MER1_type? -763 131 43 410 307 52 23 chr2 234462154 234462322 -18794261 - MIR SINE MIR -58 150 5 292 333 93 0 chr2 234462483 234462591 -18793992 + MIR SINE MIR 113 230 -32 1845 128 14 3 chr2 234463557 234463845 -18792738 - AluSx SINE Alu -9 303 13 267 302 75 71 chr2 234464307 234464519 -18792064 - MIR SINE MIR -41 221 9 274 276 20 20 chr2 234465323 234465421 -18791162 + MLT1K LTR MaLR 131 228 -360 * 300 301 0 0 chr2 234465415 234465498 -18791085 + MLT1K LTR MaLR 146 228 -360 * 406 276 76 92 chr2 234465492 234465927 -18790656 + MLT1K LTR MaLR 146 573 -15 25 0 0 0 chr2 234467109 234467134 -18789449 + AT_rich Low_complexity Low_complexity 1 25 0 259 277 0 0 chr2 234467356 234467421 -18789162 - MIR3 SINE MIR -31 177 113 180 232 32 53 chr2 234468157 234468252 -18788331 - L2 LINE L2 -288 3025 2933 282 272 72 72 chr2 234469178 234469231 -18787352 - Charlie8 DNA MER1_type -121 209 157 1996 108 50 0 chr2 234469231 234469528 -18787055 - AluSx SINE Alu 0 312 1 282 272 72 72 chr2 234469528 234469599 -18786984 - Charlie8 DNA MER1_type -172 158 85 1558 55 18 37 chr2 234470289 234470507 -18786076 + L1PA7 LINE L1 5941 6154 0 402 291 68 48 chr2 234470850 234471056 -18785527 + L2 LINE L2 3101 3310 -3 23 92 0 0 chr2 234472869 234472934 -18783649 + GC_rich Low_complexity Low_complexity 1 65 0 223 233 0 17 chr2 234473195 234473255 -18783328 + (CCCCG)n Simple_repeat Simple_repeat 1 59 0 606 279 85 68 chr2 234474342 234474708 -18781875 + L2 LINE L2 2941 3312 -1 786 175 12 6 chr2 234474997 234475157 -18781426 - L1MD1 LINE L1 0 6242 6082 263 219 31 16 chr2 234477589 234477653 -18778930 + LTR67 LTR ERVL 493 557 0 304 319 129 42 chr2 234477684 234477918 -18778665 + L2 LINE L2 2226 2438 -876 2102 94 0 7 chr2 234477918 234478378 -18778205 - AluSx SINE Alu 0 458 1 304 319 129 42 chr2 234478378 234478615 -18777968 + L2 LINE L2 2438 2739 -575 719 238 99 18 chr2 234478669 234478892 -18777691 + MIR SINE MIR 12 252 -10 829 215 83 139 chr2 234479081 234479116 -18777467 - MLT1H LTR MaLR 0 549 514 2208 100 3 0 chr2 234479116 234479416 -18777167 - AluSq SINE Alu -12 301 1 829 215 83 139 chr2 234479416 234479879 -18776704 - MLT1H LTR MaLR -35 514 86 1545 163 38 116 chr2 234479879 234480124 -18776459 - MLT1B LTR MaLR 0 390 190 2170 129 0 0 chr2 234480124 234480435 -18776148 - AluSx SINE Alu -1 311 1 1545 163 38 116 chr2 234480435 234480612 -18775971 - MLT1B LTR MaLR -200 190 1 829 215 83 139 chr2 234480612 234480693 -18775890 - MLT1H LTR MaLR -463 86 2 271 267 124 38 chr2 234480847 234480952 -18775631 + L2 LINE L2 3199 3312 -1 551 231 21 103 chr2 234481052 234481286 -18775297 + MIR SINE MIR 3 217 -45 2018 161 55 3 chr2 234481364 234481711 -18774872 + MLT1A1 LTR MaLR 1 365 0 758 120 0 0 chr2 234481735 234481835 -18774748 - AluJ/FLAM SINE Alu -211 101 2 224 382 13 0 chr2 234481892 234481968 -18774615 - MIR3 SINE MIR -50 158 82 283 351 66 0 chr2 234482035 234482186 -18774397 + MIR SINE MIR 56 216 -46 1504 177 20 17 chr2 234482719 234483018 -18773565 + AluJo SINE Alu 2 301 -11 6107 144 10 18 chr2 234483131 234485029 -18771554 - L1MA5 LINE L1 0 6300 4425 210 250 19 0 chr2 234485213 234485265 -18771318 + CT-rich Low_complexity Low_complexity 1 53 0 971 270 9 0 chr2 234485291 234485513 -18771070 + MIR SINE MIR 16 239 -23 2382 168 113 148 chr2 234485924 234486450 -18770133 - L1MD3 LINE L1 -5 7990 7447 335 259 71 0 chr2 234486450 234486535 -18770048 - MLT1F1 LTR MaLR -442 125 35 2382 168 113 148 chr2 234486535 234486968 -18769615 - L1MD3 LINE L1 -548 7447 6732 2448 68 0 0 chr2 234486968 234487279 -18769304 + AluY SINE Alu 1 311 0 2382 168 113 148 chr2 234487279 234487323 -18769260 - L1MD3 LINE L1 -1263 6732 6688 1262 294 127 14 chr2 234487727 234488238 -18768345 + MLT1L LTR MaLR 47 615 0 217 355 39 51 chr2 234488526 234488830 -18767753 - L2 LINE L2 -285 2987 2682 1867 151 102 6 chr2 234488962 234489294 -18767289 - THE1B LTR MaLR 0 364 1 350 216 155 10 chr2 234489321 234489418 -18767165 + MLT1J2 LTR MaLR 67 177 -273 384 152 106 0 chr2 234489604 234489665 -18766918 - MLT1C LTR MaLR 0 467 400 2553 161 35 7 chr2 234489665 234490099 -18766484 - MER7C DNA MER2_type 0 602 157 1363 158 0 19 chr2 234490076 234490291 -18766292 - MER6 DNA MER2_type -654 211 1 * 1017 183 6 0 chr2 234490291 234490463 -18766120 - MER7C DNA MER2_type -428 174 2 1355 232 44 37 chr2 234490464 234490708 -18765875 - MLT1C LTR MaLR -66 401 145 2550 134 30 16 chr2 234490708 234491134 -18765449 - MSTB1 LTR MaLR 0 432 1 1355 232 44 37 chr2 234491134 234491281 -18765302 - MLT1C LTR MaLR -322 145 1 1933 155 9 49 chr2 234491301 234491650 -18764933 - MER1B DNA MER1_type 0 337 3 180 331 144 29 chr2 234492014 234492153 -18764430 - L2 LINE L2 -597 2717 2563 2434 122 28 14 chr2 234492646 234493000 -18763583 - THE1B LTR MaLR -5 359 1 533 364 37 0 chr2 234494194 234494411 -18762172 + MIR SINE MIR 8 232 -30 391 354 60 14 chr2 234494767 234494982 -18761601 + L3b LINE CR1 1153 1377 -206 402 21 0 0 chr2 234495849 234495896 -18760687 + (TG)n Simple_repeat Simple_repeat 2 48 0 644 236 76 119 chr2 234496923 234497425 -18759158 - MLT1H LTR MaLR 0 549 1 1851 109 44 7 chr2 234497745 234498020 -18758563 - AluSx SINE Alu -27 285 1 235 341 59 6 chr2 234498496 234498615 -18757968 + MIR SINE MIR 30 153 -63 242 0 0 57 chr2 234499396 234499431 -18757152 + (TGG)n Simple_repeat Simple_repeat 1 33 0 4092 138 5 1 chr2 234500276 234500927 -18755656 - L1PA15 LINE L1 0 6165 5513 2366 89 35 6 chr2 234500927 234501265 -18755318 + L1PA10 LINE L1 5817 6164 -4 244 89 222 0 chr2 234501268 234501313 -18755270 - L1PA15 LINE L1 -636 5525 5471 997 279 79 32 chr2 234501363 234501706 -18754877 - L2 LINE L2 -7 3306 2923 560 206 118 6 chr2 234501706 234501876 -18754707 - MER53 DNA DNA 0 189 1 997 279 79 32 chr2 234501876 234502109 -18754474 - L2 LINE L2 -390 2923 2702 192 292 62 91 chr2 234502176 234502385 -18754198 - L2 LINE L2 -75 3197 2995 212 293 17 0 chr2 234502730 234502788 -18753795 + L2 LINE L2 3210 3268 -4 1248 201 132 53 chr2 234503178 234503611 -18752972 - MLT1C LTR MaLR 0 467 1 1365 308 45 13 chr2 234503719 234504183 -18752400 + LTR16C LTR ERVL 4 482 -9 233 270 16 16 chr2 234504305 234504368 -18752215 - MIR SINE MIR -64 144 82 232 150 33 50 chr2 234504373 234504433 -18752150 - MLT1C LTR MaLR -5 462 404 192 262 66 66 chr2 234504433 234504494 -18752089 - MIR SINE MIR -197 65 5 988 311 31 47 chr2 234504521 234504740 -18751843 - LTR16A LTR ERVL -9 441 231 1828 126 51 3 chr2 234504740 234505033 -18751550 - AluSg SINE Alu -3 307 1 988 311 31 47 chr2 234505033 234505237 -18751346 - LTR16A LTR ERVL -219 231 25 642 335 62 30 chr2 234505570 234506129 -18750454 - ERVL LTR ERVL -301 5079 4534 825 271 20 44 chr2 234506255 234506506 -18750077 - LTR16A LTR ERVL -146 304 60 1314 182 30 4 chr2 234507551 234507782 -18748801 - LTR32 LTR ERVL -222 249 13 525 204 105 33 chr2 234507782 234507963 -18748620 - HERVL32 LTR ERVL 0 3418 3225 2295 119 40 8 chr2 234508165 234508518 -18748065 - THE1B LTR MaLR 0 364 1 6314 242 98 80 chr2 234508934 234509588 -18746995 - HERVL32 LTR ERVL -209 3209 2568 191 196 78 39 chr2 234509588 234509639 -18746944 - L3 LINE CR1 -273 1304 1252 6314 242 98 80 chr2 234509639 234509954 -18746629 - HERVL32 LTR ERVL -850 2568 2260 2807 106 34 0 chr2 234509954 234510368 -18746215 + MSTA LTR MaLR 1 428 0 6314 242 98 80 chr2 234510368 234511412 -18745171 - HERVL32 LTR ERVL -1158 2260 1088 3505 138 98 21 chr2 234511412 234512078 -18744505 - LTR62 LTR ERVK -2 717 1 6314 242 98 80 chr2 234512078 234512540 -18744043 - HERVL32 LTR ERVL -2330 1088 636 1251 268 35 18 chr2 234512613 234512956 -18743627 - HERVL32 LTR ERVL -3069 349 1 774 196 28 0 chr2 234512960 234513103 -18743480 - LTR32 LTR ERVL 0 471 325 1713 169 32 32 chr2 234513154 234513419 -18743164 - LTR32 LTR ERVL -119 352 85 2084 139 169 5 chr2 234513419 234513787 -18742796 + MSTA LTR MaLR 1 428 0 1713 169 32 32 chr2 234513787 234513859 -18742724 - LTR32 LTR ERVL -385 86 15 358 257 62 121 chr2 234514099 234514437 -18742146 + L2 LINE L2 2955 3272 0 226 173 180 25 chr2 234514508 234514589 -18741994 + MIR SINE MIR 58 152 -56 395 318 141 9 chr2 234516841 234517174 -18739409 - L2 LINE L2 -39 3274 2898 2172 132 3 3 chr2 234517189 234517499 -18739084 + AluSx SINE Alu 3 312 0 267 54 0 0 chr2 234517612 234517649 -18738934 + (TG)n Simple_repeat Simple_repeat 2 38 0 210 143 0 0 chr2 234517858 234517893 -18738690 + (A)n Simple_repeat Simple_repeat 1 35 0 785 282 100 71 chr2 234518219 234518709 -18737874 + MLT1K LTR MaLR 59 562 -26 369 43 0 0 chr2 234518714 234518761 -18737822 + (CA)n Simple_repeat Simple_repeat 2 48 0 24 53 0 0 chr2 234520381 234520419 -18736164 + AT_rich Low_complexity Low_complexity 1 38 0 2627 88 131 2 chr2 234521213 234521610 -18734973 - LTR7 LTR ERV1 -2 448 1 2870 99 9 14 chr2 234521610 234522043 -18734540 - HERVH LTR ERV1 0 7713 7283 19585 152 54 59 chr2 234522047 234526963 -18729620 - HERVH LTR ERV1 -2693 5020 1 2638 88 123 25 chr2 234526965 234527373 -18729210 - LTR7 LTR ERV1 -2 448 1 377 250 148 61 chr2 234527964 234528160 -18728423 - MIR SINE MIR 0 262 50 2031 218 15 28 chr2 234528467 234528935 -18727648 + MLT1C LTR MaLR 6 467 0 2329 116 0 0 chr2 234530294 234530605 -18725978 + AluSx SINE Alu 1 311 -1 1739 149 65 0 chr2 234533275 234533550 -18723033 - AluSx SINE Alu -19 293 1 183 42 0 0 chr2 234533615 234533639 -18722944 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 229 341 12 12 chr2 234533767 234533849 -18722734 + MIR SINE MIR 20 101 -161 4506 46 0 6 chr2 234533979 234534525 -18722058 - L1PA6 LINE L1 -11 6143 5601 391 303 43 83 chr2 234534887 234535211 -18721372 - L2 LINE L2 0 3313 3003 22 35 0 0 chr2 234535982 234536011 -18720572 + AT_rich Low_complexity Low_complexity 1 29 0 293 272 48 10 chr2 234537142 234537245 -18719338 - L2 LINE L2 0 3313 3207 585 61 0 0 chr2 234538394 234538476 -18718107 + (TTCC)n Simple_repeat Simple_repeat 1 82 0 460 262 99 56 chr2 234538681 234538701 -18717882 + MIR SINE MIR 8 26 -236 370 111 56 28 chr2 234538701 234538773 -18717810 + L1PB4 LINE L1 6083 6156 0 460 262 99 56 chr2 234538773 234538881 -18717702 + MIR SINE MIR 26 128 -134 189 0 0 0 chr2 234538881 234538902 -18717681 + (TAA)n Simple_repeat Simple_repeat 1 21 0 460 262 99 56 chr2 234538902 234539005 -18717578 + MIR SINE MIR 128 250 -12 933 257 27 51 chr2 234539271 234539371 -18717212 - L1MA9 LINE L1 -28 6284 6183 2675 114 53 15 chr2 234539371 234539783 -18716800 - MSTA LTR MaLR 0 428 1 933 257 27 51 chr2 234539783 234540017 -18716566 - L1MA9 LINE L1 -129 6183 5958 773 196 83 61 chr2 234540129 234540358 -18716225 - MLT1A1 LTR MaLR 0 365 132 1212 90 37 32 chr2 234540370 234540558 -18716025 + AluSx SINE Alu 8 196 -116 540 329 98 23 chr2 234542197 234542504 -18714079 + MER102b DNA MER1_type 1 330 -11 498 294 87 5 chr2 234542550 234542768 -18713815 - MIR SINE MIR 0 262 27 1434 183 96 51 chr2 234543975 234544039 -18712544 + MLT1A2 LTR MaLR 1 61 -313 2172 122 39 33 chr2 234544039 234544401 -18712182 + THE1B LTR MaLR 1 364 0 1434 183 96 51 chr2 234544401 234544691 -18711892 + MLT1A2 LTR MaLR 61 371 -3 294 245 163 0 chr2 234544744 234544842 -18711741 + L2 LINE L2 3191 3304 -9 878 183 33 7 chr2 234544886 234545039 -18711544 - FAM SINE Alu -17 158 2 24 53 0 0 chr2 234545307 234545345 -18711238 + AT_rich Low_complexity Low_complexity 1 38 0 257 208 0 0 chr2 234545539 234545592 -18710991 + L2 LINE L2 3261 3313 0 1124 262 28 0 chr2 234545970 234546260 -18710323 + MLT1H LTR MaLR 1 298 -251 233 200 50 0 chr2 234546270 234546310 -18710273 + MLT1H LTR MaLR 261 302 -228 847 135 0 8 chr2 234547243 234547369 -18709214 - AluSp SINE Alu -188 125 1 1773 122 0 0 chr2 234547381 234547644 -18708939 - L1PA14 LINE L1 -1 6160 5898 551 177 9 18 chr2 234547644 234547757 -18708826 - MLT1A1 LTR MaLR -253 112 1 200 255 85 53 chr2 234547757 234547851 -18708732 - MIR SINE MIR -80 128 32 1899 136 10 43 chr2 234548045 234548346 -18708237 - AluSx SINE Alu -21 291 1 443 293 110 11 chr2 234548349 234548540 -18708043 + MIR SINE MIR 37 246 -16 323 245 230 7 chr2 234549090 234549229 -18707354 + MER5A DNA MER1_type 7 176 -13 1758 141 3 69 chr2 234551339 234551658 -18704925 - AluJb SINE Alu -13 299 2 227 235 29 29 chr2 234552998 234553066 -18703517 - L2 LINE L2 -1 3271 3204 833 241 41 22 chr2 234553682 234553952 -18702631 - LTR48B LTR ERV1 -4 640 366 825 190 56 11 chr2 234554249 234554428 -18702155 - MLT1B LTR MaLR 0 390 204 560 244 194 30 chr2 234554514 234554900 -18701683 - L2 LINE L2 -216 3097 2638 625 303 95 47 chr2 234554993 234555445 -18701138 + MLT1G1 LTR MaLR 77 550 -45 251 300 209 27 chr2 234555445 234555665 -18700918 + L2 LINE L2 2649 2908 -406 277 195 12 12 chr2 234555725 234555807 -18700776 + CT-rich Low_complexity Low_complexity 4 85 0 210 37 0 0 chr2 234555945 234555972 -18700611 + (GA)n Simple_repeat Simple_repeat 2 28 0 2131 215 43 7 chr2 234556258 234556695 -18699888 - MLT1E2 LTR MaLR 0 626 174 3486 115 4 2 chr2 234556695 234557190 -18699393 + MER75 DNA T2_type 1 496 -18 2846 28 0 3 chr2 234557190 234557508 -18699075 - AluYb8 SINE Alu 0 318 2 542 330 43 29 chr2 234558700 234558923 -18697660 + L2 LINE L2 2880 3109 -204 2109 143 3 0 chr2 234558923 234559231 -18697352 - AluSx SINE Alu -3 309 1 542 330 43 29 chr2 234559231 234559283 -18697300 + L2 LINE L2 3109 3159 -154 1069 201 150 11 chr2 234561059 234561424 -18695159 + L1ME3A LINE L1 5713 6155 -9 1117 242 36 51 chr2 234561550 234561966 -18694617 - MLT2B1 LTR ERVL -56 464 1 12645 156 22 14 chr2 234561966 234565794 -18690789 - ERVL LTR ERVL -7 5757 1760 505 214 10 0 chr2 234565794 234565897 -18690686 - MLT2B2 LTR ERVL -411 104 1 463 202 79 44 chr2 234565897 234566011 -18690572 + MLT1E LTR MaLR 5 122 -532 2152 154 55 18 chr2 234566016 234566398 -18690185 - MER61B LTR ERV1 -29 396 1 487 203 114 31 chr2 234566414 234566505 -18690078 + MLT1E LTR MaLR 130 212 -412 2376 89 0 0 chr2 234566505 234566807 -18689776 + AluSc SINE Alu 1 302 -7 487 203 114 31 chr2 234566807 234566919 -18689664 + MLT1E LTR MaLR 212 361 -263 * 716 124 6 4 chr2 234566888 234567015 -18689568 + MLT1E LTR MaLR 499 593 0 297 307 53 13 chr2 234567378 234567528 -18689055 + L1ME LINE L1 5574 5729 -392 23 33 0 0 chr2 234567552 234567582 -18689001 + AT_rich Low_complexity Low_complexity 1 30 0 3590 275 53 46 chr2 234567719 234569260 -18687323 + L1PBa LINE L1 3 1553 -5310 6459 162 31 7 chr2 234569267 234571042 -18685541 + L1P5 LINE L1 1 1821 -4383 2394 135 125 10 chr2 234571042 234571426 -18685157 + MSTA LTR MaLR 1 428 0 10316 109 56 11 chr2 234571428 234572938 -18683645 + MSTA-int LTR MaLR 3 1580 0 2018 136 102 37 chr2 234572938 234573290 -18683293 + THE1C LTR MaLR 1 375 0 1835 151 115 57 chr2 234573290 234573673 -18682910 + MSTA LTR MaLR 24 428 0 13793 212 35 11 chr2 234573673 234575350 -18681233 + L1P5 LINE L1 1817 3452 -2759 216 0 0 0 chr2 234575350 234575374 -18681209 + (CAA)n Simple_repeat Simple_repeat 1 24 0 13793 212 35 11 chr2 234575374 234577339 -18679244 + L1P5 LINE L1 3452 5551 -660 1464 152 4 8 chr2 234577564 234577807 -18678776 + AluJb SINE Alu 35 276 -36 195 42 0 0 chr2 234577808 234577832 -18678751 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 203 385 9 9 chr2 234578552 234578661 -18677922 - MIR SINE MIR -141 121 13 207 0 0 0 chr2 234579029 234579052 -18677531 + (TG)n Simple_repeat Simple_repeat 1 23 0 186 280 100 60 chr2 234579061 234579161 -18677422 + L2 LINE L2 3124 3227 -45 1936 141 69 30 chr2 234579161 234579522 -18677061 + THE1C LTR MaLR 1 375 0 184 277 62 0 chr2 234579542 234579607 -18676976 - L2 LINE L2 -13 3300 3232 1974 182 12 6 chr2 234580003 234580344 -18676239 + MLT1A1 LTR MaLR 23 365 0 21 36 0 0 chr2 234580667 234580695 -18675888 + AT_rich Low_complexity Low_complexity 1 28 0 527 281 111 5 chr2 234580747 234580964 -18675619 - MIR SINE MIR -21 241 2 199 143 0 0 chr2 234581046 234581081 -18675502 + L2 LINE L2 3274 3308 -5 180 111 0 0 chr2 234581900 234581927 -18674656 + (TA)n Simple_repeat Simple_repeat 2 28 0 2189 106 11 0 chr2 234581940 234582224 -18674359 + AluSc SINE Alu 1 287 -22 2260 152 29 8 chr2 234582309 234582691 -18673892 + MLT1B LTR MaLR 1 390 0 318 179 30 0 chr2 234582821 234582888 -18673695 + MER116 DNA Mariner 8 76 -4 541 230 13 26 chr2 234583010 234583162 -18673421 + MIR SINE MIR 105 254 -8 1351 129 43 5 chr2 234583291 234583501 -18673082 + MER20 DNA MER1_type 1 218 -1 1613 225 201 24 chr2 234583554 234584229 -18672354 + LTR50 LTR ERVL 1 795 0 333 274 65 39 chr2 234584289 234584442 -18672141 - MLT1K LTR MaLR -246 342 186 185 327 177 9 chr2 234584918 234585031 -18671552 + MIR3 SINE MIR 1 132 -76 * 317 262 92 21 chr2 234585005 234585146 -18671437 + MIR SINE MIR 106 256 -6 539 262 95 45 chr2 234585361 234585582 -18671001 + MIR SINE MIR 15 246 -16 301 266 64 39 chr2 234586194 234586397 -18670186 + L1ME3A LINE L1 5745 5952 -218 1010 209 100 64 chr2 234586514 234586825 -18669758 + L1ME3 LINE L1 5777 6098 -64 1625 198 0 3 chr2 234586932 234587220 -18669363 + AluJo SINE Alu 5 291 -21 1758 220 68 5 chr2 234587396 234587796 -18668787 + MER119 DNA MER1_type 1 425 -158 268 185 0 0 chr2 234588916 234588970 -18667613 + MER119 DNA MER1_type 416 469 -114 719 46 0 0 chr2 234589442 234589529 -18667054 - AluY SINE Alu -7 304 218 1546 65 0 0 chr2 234589529 234589714 -18666869 - AluY SINE Alu -126 185 1 298 344 23 23 chr2 234591001 234591132 -18665451 + MIR SINE MIR 19 149 -59 277 351 83 5 chr2 234591136 234591309 -18665274 + MIR SINE MIR 8 191 -63 2191 116 66 33 chr2 234591699 234592062 -18664521 - THE1C LTR MaLR 0 375 1 318 237 217 29 chr2 234592155 234592362 -18664221 - L1ME4a LINE L1 -8 6113 5868 2704 160 27 38 chr2 234592381 234592906 -18663677 - L1MB5 LINE L1 -28 6146 5628 603 250 12 6 chr2 234592904 234593076 -18663507 - L1ME4a LINE L1 -240 5881 5709 * 378 282 129 20 chr2 234593107 234593309 -18663274 - MIR SINE MIR -12 250 27 293 159 196 47 chr2 234594227 234594334 -18662249 - L2 LINE L2 0 3313 3191 1353 184 43 4 chr2 234594464 234594720 -18661863 + MLT1D LTR MaLR 240 505 0 1918 276 121 34 chr2 234594720 234595565 -18661018 - L2 LINE L2 -2370 944 27 1451 200 160 18 chr2 234597186 234597586 -18658997 + MSTB2 LTR MaLR 1 457 0 528 293 91 13 chr2 234598200 234598596 -18657987 + L1ME4a LINE L1 5677 6103 -18 309 100 0 0 chr2 234598697 234598747 -18657836 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 225 0 0 0 chr2 234598777 234598802 -18657781 + (TAGA)n Simple_repeat Simple_repeat 4 28 0 246 261 0 0 chr2 234598802 234598867 -18657716 + L1P LINE L1 5049 5113 -1033 1740 88 21 0 chr2 234598867 234599107 -18657476 - L1PB3 LINE L1 -109 6045 5801 2381 117 51 20 chr2 234599109 234599460 -18657123 - THE1B LTR MaLR -2 362 1 200 200 0 0 chr2 234599902 234599937 -18656646 + L3 LINE CR1 1541 1575 -2 186 294 152 33 chr2 234601017 234601109 -18655474 + MER5B DNA MER1_type 76 178 0 289 274 137 0 chr2 234601324 234601419 -18655164 + MIR SINE MIR 30 137 -125 1074 248 89 33 chr2 234602382 234602773 -18653810 - MLT1J LTR MaLR -9 502 90 2095 175 94 10 chr2 234602877 234603272 -18653311 + MSTA LTR MaLR 1 428 0 417 349 62 32 chr2 234603503 234603841 -18652742 - L2 LINE L2 -21 3251 2904 2325 219 24 42 chr2 234604402 234604954 -18651629 + MLT1F LTR MaLR 1 542 0 413 293 141 76 chr2 234605073 234605263 -18651320 - L2 LINE L2 -14 3299 3123 585 170 188 0 chr2 234605263 234605375 -18651208 + FLAM_A SINE Alu 1 133 0 413 293 141 76 chr2 234605375 234605617 -18650966 - L2 LINE L2 -190 3123 2839 1894 196 181 134 chr2 234607441 234607996 -18648587 + MLT1E2 LTR MaLR 1 561 -65 8749 189 63 5 chr2 234607996 234610362 -18646221 + L1PA15 LINE L1 3729 6164 -1 1894 196 181 134 chr2 234610362 234610423 -18646160 + MLT1E2 LTR MaLR 561 618 -8 2261 191 54 19 chr2 234610475 234610957 -18645626 - MLT1D LTR MaLR 0 505 7 344 266 0 0 chr2 234611275 234611354 -18645229 - MER5B DNA MER1_type -99 79 1 221 191 9 165 chr2 234611359 234611417 -18645166 + MER5A DNA MER1_type 74 107 -82 1880 179 72 17 chr2 234611417 234611763 -18644820 - MLT1A1 LTR MaLR 0 365 1 221 191 9 165 chr2 234611763 234611819 -18644764 + MER5A DNA MER1_type 107 170 -19 2180 46 11 0 chr2 234612339 234612601 -18643982 + AluY SINE Alu 33 297 -14 754 295 88 24 chr2 234613516 234613994 -18642589 - L1ME4a LINE L1 -292 5829 5316 1931 116 60 3 chr2 234614226 234614510 -18642073 - AluSg SINE Alu -10 300 1 749 272 74 8 chr2 234614821 234615064 -18641519 - MIR SINE MIR -1 261 3 249 256 0 26 chr2 234615704 234615782 -18640801 + MER34 LTR ERV1 21 96 -446 280 0 0 0 chr2 234615811 234615841 -18640742 + LTR29 LTR ERV1 158 187 -435 334 238 179 13 chr2 234615891 234616042 -18640541 + LTR48B LTR ERV1 145 320 -324 288 271 146 71 chr2 234616501 234616851 -18639732 + MLT1K LTR MaLR 207 582 -6 24 32 0 0 chr2 234617364 234617395 -18639188 + AT_rich Low_complexity Low_complexity 1 31 0 1807 168 3 32 chr2 234617799 234618115 -18638468 - AluJb SINE Alu -5 307 1 1926 154 13 0 chr2 234618467 234618772 -18637811 - AluJb SINE Alu -3 309 1 2518 163 23 16 chr2 234618892 234619321 -18637262 - MSTB1 LTR MaLR 0 432 1 1596 142 142 31 chr2 234621025 234621169 -18635414 - MLT1A1 LTR MaLR -4 361 234 2517 135 75 8 chr2 234621169 234621570 -18635013 + MSTA LTR MaLR 1 428 0 1596 142 142 31 chr2 234621570 234621749 -18634834 - MLT1A1 LTR MaLR -131 234 2 285 333 0 37 chr2 234621967 234622102 -18634481 - MER5A DNA MER1_type -9 180 51 762 125 0 0 chr2 234623552 234623664 -18632919 + L1MA5A LINE L1 6181 6292 -5 291 259 171 44 chr2 234623790 234623948 -18632635 + MIR SINE MIR 69 246 -16 187 284 108 0 chr2 234623965 234624039 -18632544 - L2 LINE L2 -50 3222 3141 810 310 112 64 chr2 234625151 234626436 -18630147 - L2 LINE L2 -707 2607 1261 703 137 46 46 chr2 234626711 234626842 -18629741 - THE1B LTR MaLR -233 131 1 334 95 0 0 chr2 234626842 234626881 -18629702 + THE1A LTR MaLR 317 355 0 517 324 214 23 chr2 234627426 234628117 -18628466 - L2 LINE L2 -2276 1038 216 618 297 19 106 chr2 234628374 234628835 -18627748 + L2 LINE L2 2851 3271 -1 229 282 14 42 chr2 234630404 234630475 -18626108 + MIR3 SINE MIR 110 178 -30 1853 242 68 64 chr2 234630529 234631087 -18625496 - MLT1H1 LTR MaLR 0 555 1 4918 66 5 2 chr2 234631917 234632506 -18624077 + LTR10C LTR ERV1 1 591 0 563 254 107 11 chr2 234632966 234633143 -18623440 + MIR SINE MIR 53 246 -16 220 231 0 0 chr2 234633109 234633148 -18623435 + L2 LINE L2 3258 3296 -17 * 878 273 62 4 chr2 234633222 234633449 -18623134 + MIR SINE MIR 1 240 -22 532 245 27 27 chr2 234633550 234633697 -18622886 + MER45A DNA AcHobo 32 178 0 2298 95 0 10 chr2 234634062 234634358 -18622225 + AluSq SINE Alu 1 293 -20 665 290 221 18 chr2 234634909 234635401 -18621182 + L2 LINE L2 2710 3313 0 378 246 124 49 chr2 234636028 234636374 -18620209 + MLT1H LTR MaLR 50 386 -23 921 144 185 0 chr2 234636711 234636884 -18619699 - MER3 DNA MER1_type -1 208 4 221 331 274 12 chr2 234637952 234638375 -18618208 + L2 LINE L2 884 1417 -1897 1552 214 48 19 chr2 234638388 234638762 -18617821 + MLT1B LTR MaLR 6 390 0 287 383 54 4 chr2 234638885 234639146 -18617437 + L2 LINE L2 1581 1854 -1460 328 265 94 51 chr2 234639174 234639469 -18617114 - MLT1G1 LTR MaLR 0 595 224 623 234 66 0 chr2 234639510 234639677 -18616906 - MLT1G LTR MaLR -1 589 412 2187 104 80 9 chr2 234639744 234640081 -18616502 + THE1C LTR MaLR 15 375 0 252 86 0 0 chr2 234640128 234640163 -18616420 + (GA)n Simple_repeat Simple_repeat 1 35 0 628 299 183 11 chr2 234640253 234640624 -18615959 + L2 LINE L2 2202 2636 -678 1313 269 82 21 chr2 234640982 234641447 -18615136 - L2 LINE L2 -4 3309 2817 197 228 35 18 chr2 234641635 234641692 -18614891 + MIR SINE MIR 193 250 -12 393 227 256 23 chr2 234641735 234641911 -18614672 + MIR SINE MIR 46 262 0 565 265 29 63 chr2 234642062 234642300 -18614283 + L2 LINE L2 3083 3312 -1 189 74 0 0 chr2 234643638 234643665 -18612918 + (TGGGGG)n Simple_repeat Simple_repeat 1 27 0 3791 117 21 11 chr2 234645722 234646279 -18610304 - L1PA13 LINE L1 0 6163 5601 469 319 144 16 chr2 234646463 234646903 -18609680 - L2 LINE L2 -2 3311 2670 654 133 26 0 chr2 234646928 234647041 -18609542 + MER53 DNA DNA 23 138 -51 2126 120 17 0 chr2 234647244 234647536 -18609047 - AluSx SINE Alu -15 297 1 189 74 0 0 chr2 234647695 234647722 -18608861 + (CA)n Simple_repeat Simple_repeat 2 28 0 1866 177 40 53 chr2 234648088 234648483 -18608100 - MLT1B LTR MaLR 0 390 1 3223 77 5 9 chr2 234648734 234649175 -18607408 - LTR7 LTR ERV1 -11 439 1 1351 184 59 69 chr2 234649467 234649674 -18606909 - MLT1A2 LTR MaLR 0 374 166 192 47 47 23 chr2 234649674 234649717 -18606866 + (TTTTA)n Simple_repeat Simple_repeat 1 44 0 2232 107 0 0 chr2 234649717 234649997 -18606586 - AluSx SINE Alu -32 280 1 1351 184 59 69 chr2 234649997 234650163 -18606420 - MLT1A2 LTR MaLR -206 168 4 2227 152 36 0 chr2 234650341 234650670 -18605913 + MER61A LTR ERV1 3 343 0 1429 250 116 36 chr2 234650991 234651491 -18605092 - MLT1H LTR MaLR 0 549 10 467 283 107 11 chr2 234652239 234652416 -18604167 - MIR SINE MIR -21 241 48 1155 98 18 6 chr2 234652483 234652647 -18603936 + MER61A LTR ERV1 1 166 -177 180 0 0 0 chr2 234655206 234655226 -18601357 + (T)n Simple_repeat Simple_repeat 1 20 0 223 333 0 0 chr2 234655227 234655287 -18601296 - L2 LINE L2 -26 3246 3187 195 296 0 0 chr2 234655304 234655348 -18601235 + MIR SINE MIR 213 256 -6 587 242 21 16 chr2 234655429 234655587 -18600996 + MLT1J1 LTR MaLR 1 160 -249 315 355 12 24 chr2 234655682 234655848 -18600735 - L2 LINE L2 -567 2747 2584 2272 83 28 0 chr2 234657822 234658110 -18598473 + AluY SINE Alu 1 296 -15 261 0 0 0 chr2 234658421 234658450 -18598133 + (A)n Simple_repeat Simple_repeat 1 29 0 351 245 102 0 chr2 234659158 234659256 -18597327 + MER5C DNA MER1_type 17 124 -200 197 188 0 0 chr2 234659354 234659386 -18597197 + MER5C DNA MER1_type 293 324 0 21 36 0 0 chr2 234659608 234659636 -18596947 + AT_rich Low_complexity Low_complexity 1 28 0 2764 73 131 5 chr2 234659696 234660094 -18596489 + LTR7 LTR ERV1 1 448 -2 20559 94 21 12 chr2 234660096 234663059 -18593524 + HERVH LTR ERV1 1 2987 -4726 864 149 20 0 chr2 234663053 234663201 -18593382 + HERVH LTR ERV1 3140 3290 -4423 * 3487 99 4 6 chr2 234663191 234663694 -18592889 + HERVH LTR ERV1 3492 3993 -3720 4363 144 3 1 chr2 234663696 234664357 -18592226 + HERVH LTR ERV1 4488 5149 -2564 1398 129 18 5 chr2 234664358 234664575 -18592008 + HERVH LTR ERV1 5600 5819 -1894 * 2338 108 48 13 chr2 234664573 234664952 -18591631 + HERVH LTR ERV1 7322 7713 0 677 113 0 99 chr2 234664952 234665093 -18591490 + LTR7 LTR ERV1 1 127 -323 791 43 0 11 chr2 234665196 234665290 -18591293 + LTR7 LTR ERV1 356 448 -2 327 254 35 0 chr2 234665344 234665486 -18591097 - L1ME4a LINE L1 -241 5880 5734 494 186 9 9 chr2 234665500 234665613 -18590970 - L1MEc LINE L1 -3982 2414 2302 * 11232 201 29 15 chr2 234665597 234667379 -18589204 - L1PA16 LINE L1 -3 6163 4406 2250 105 3 13 chr2 234667379 234667694 -18588889 + AluSp SINE Alu 1 312 -1 11232 201 29 15 chr2 234667694 234669614 -18586969 - L1PA16 LINE L1 -1760 4406 2416 1922 236 90 58 chr2 234669615 234670040 -18586543 - L1MEc LINE L1 -4069 2327 1917 2260 103 3 0 chr2 234670040 234670341 -18586242 - AluSc SINE Alu -7 302 1 1922 236 90 58 chr2 234670341 234670975 -18585608 - L1MEc LINE L1 -4479 1917 1235 331 311 0 0 chr2 234670981 234671071 -18585512 + L1MC4 LINE L1 6614 6703 -1339 307 326 0 0 chr2 234671031 234671120 -18585463 - L1MC4 LINE L1 -1339 6703 6615 * 363 217 61 0 chr2 234671124 234671239 -18585344 - L1MEc LINE L1 -5167 1229 1108 1172 221 79 22 chr2 234671254 234671570 -18585013 - MLT1A2 LTR MaLR -40 334 1 3156 227 36 57 chr2 234671571 234672667 -18583916 - L1MEc LINE L1 -5280 1116 44 252 262 16 0 chr2 234673051 234673112 -18583471 - L2 LINE L2 0 3313 3252 554 178 0 0 chr2 234673875 234673965 -18582618 + AluY SINE Alu 207 296 -15 270 0 0 0 chr2 234674276 234674306 -18582277 + (A)n Simple_repeat Simple_repeat 1 30 0 581 266 53 18 chr2 234674641 234674810 -18581773 - MER5B DNA MER1_type 0 178 4 449 244 26 17 chr2 234675146 234675261 -18581322 - MER63 DNA MER1_type -311 751 10 281 328 86 8 chr2 234675312 234675440 -18581143 - MIR3 SINE MIR -56 152 15 2627 189 8 18 chr2 234675521 234676012 -18580571 + MER66B LTR ERV1 1 486 0 740 218 39 35 chr2 234676049 234676306 -18580277 + L1MC4a LINE L1 5772 6029 -1779 907 281 41 0 chr2 234676367 234676659 -18579924 + MER90 LTR ERV1 65 368 -207 21 57 0 0 chr2 234676760 234676795 -18579788 + AT_rich Low_complexity Low_complexity 1 35 0 281 325 94 0 chr2 234677242 234677359 -18579224 + L2 LINE L2 3118 3245 -27 925 219 101 14 chr2 234677364 234677642 -18578941 + MLT1C LTR MaLR 6 307 -160 475 276 73 16 chr2 234677731 234677923 -18578660 + MIR SINE MIR 5 207 -55 1074 179 25 68 chr2 234677942 234678266 -18578317 + MER33 DNA MER1_type 13 322 -2 244 273 0 0 chr2 234678430 234678485 -18578098 - MIR SINE MIR -7 255 201 677 337 139 56 chr2 234679651 234680820 -18575763 + L2 LINE L2 1710 2976 -338 2914 101 5 27 chr2 234680914 234681358 -18575225 - MER57B LTR ERV1 0 434 1 492 130 40 10 chr2 234681943 234682043 -18574540 - MER106B DNA MER1_type -15 1044 942 2235 116 0 0 chr2 234683738 234684039 -18572544 + AluSx SINE Alu 1 301 -11 852 136 17 17 chr2 234684352 234684529 -18572054 + L1MA7 LINE L1 6114 6290 -1 2030 146 7 10 chr2 234685758 234686067 -18570516 + AluJo SINE Alu 1 308 -4 225 0 0 0 chr2 234686245 234686270 -18570313 + (CA)n Simple_repeat Simple_repeat 2 26 0 1865 203 80 5 chr2 234687076 234687290 -18569293 + MLT2B1 LTR ERVL 1 198 -322 771 101 0 0 chr2 234687290 234687409 -18569174 + (TC)n Simple_repeat Simple_repeat 2 120 0 1865 203 80 5 chr2 234687409 234687620 -18568963 + MLT2B1 LTR ERVL 198 392 -128 432 0 0 0 chr2 234687620 234687668 -18568915 + (TA)n Simple_repeat Simple_repeat 1 48 0 * 534 54 0 0 chr2 234687667 234687741 -18568842 + (GA)n Simple_repeat Simple_repeat 2 75 0 1865 203 80 5 chr2 234687668 234687753 -18568830 + MLT2B1 LTR ERVL 392 472 -48 600 107 0 0 chr2 234687970 234688073 -18568510 + (GA)n Simple_repeat Simple_repeat 2 104 0 505 155 10 0 chr2 234688713 234688810 -18567773 + Ricksha DNA DNA 8 105 -1149 7884 132 60 22 chr2 234688813 234689045 -18567538 + Ricksha DNA DNA 1714 1936 -1331 587 136 9 18 chr2 234689045 234689155 -18567428 - L1PA15 LINE L1 -2 6163 6055 7884 132 60 22 chr2 234689155 234690442 -18566141 + Ricksha DNA DNA 1936 3254 -13 185 272 58 68 chr2 234690601 234690704 -18565879 - MIR3 SINE MIR -2 206 105 238 367 117 17 chr2 234691175 234691295 -18565288 - L2 LINE L2 -9 3263 3132 355 328 0 83 chr2 234691679 234691871 -18564712 + MER5B DNA MER1_type 2 177 -1 219 366 118 38 chr2 234692730 234693044 -18563539 - L2 LINE L2 -15 3257 2919 257 267 27 0 chr2 234693078 234693153 -18563430 + MIR SINE MIR 81 157 -105 2184 95 0 0 chr2 234693157 234693431 -18563152 + AluSg SINE Alu 1 274 -36 2020 137 10 7 chr2 234693453 234693753 -18562830 + AluSx SINE Alu 1 301 -11 281 244 188 88 chr2 234695317 234695427 -18561156 - MER5A DNA MER1_type -7 182 50 2225 108 0 22 chr2 234695427 234695742 -18560841 - AluSx SINE Alu -4 308 1 281 244 188 88 chr2 234695742 234695791 -18560792 - MER5A DNA MER1_type -139 50 7 415 270 44 7 chr2 234696545 234696682 -18559901 + MIR SINE MIR 51 192 -70 2417 83 0 0 chr2 234696684 234696984 -18559599 + AluY SINE Alu 1 300 -11 402 310 35 7 chr2 234697152 234697294 -18559289 + MIR SINE MIR 10 155 -107 483 16 0 0 chr2 234698949 234699010 -18557573 - L1PA6 LINE L1 -1 6153 6093 1857 25 0 4 chr2 234699010 234699245 -18557338 + L1PA5 LINE L1 5842 6075 -79 690 245 23 9 chr2 234699665 234699883 -18556700 + L1MC4a LINE L1 7547 7808 0 2538 69 0 0 chr2 234701278 234701582 -18555001 - AluY SINE Alu -7 304 1 298 273 0 0 chr2 234701778 234701855 -18554728 + MIR SINE MIR 186 262 0 2200 112 0 3 chr2 234702502 234702806 -18553777 - AluSq SINE Alu -10 303 1 1277 236 57 8 chr2 234702857 234703226 -18553357 + MER101 LTR ERV1 88 474 0 1377 220 55 60 chr2 234703226 234703680 -18552903 + MLT1C LTR MaLR 7 458 -9 1010 227 61 71 chr2 234703924 234704351 -18552232 + L1MD2 LINE L1 5936 7785 0 1900 169 0 0 chr2 234707178 234707468 -18549115 + AluJo SINE Alu 1 290 -22 279 312 96 16 chr2 234707522 234707647 -18548936 + MLT1K LTR MaLR 14 148 -440 242 279 160 51 chr2 234707792 234708029 -18548554 + MLT1K LTR MaLR 319 581 -7 473 339 54 79 chr2 234708036 234708313 -18548270 - L2 LINE L2 -27 3245 2976 25 65 0 0 chr2 234708491 234708537 -18548046 + AT_rich Low_complexity Low_complexity 1 46 0 267 273 30 30 chr2 234708704 234708803 -18547780 + MIR3 SINE MIR 99 197 -11 515 309 136 33 chr2 234709096 234709546 -18547037 - MARNA DNA Mariner -11 575 80 1505 94 27 5 chr2 234709585 234709808 -18546775 - L1PA11 LINE L1 0 6174 5947 1597 183 50 39 chr2 234709873 234710233 -18546350 + MLT1A1 LTR MaLR 1 364 -1 348 278 188 0 chr2 234712093 234712226 -18544357 + MIR SINE MIR 77 234 -28 353 316 53 0 chr2 234712245 234712359 -18544224 - L2 LINE L2 -237 3035 2916 244 286 29 0 chr2 234712493 234712563 -18544020 - MER5A DNA MER1_type -74 115 44 213 333 78 0 chr2 234712789 234712879 -18543704 - MIR3 SINE MIR -15 193 97 520 292 168 86 chr2 234713766 234714012 -18542571 + L2 LINE L2 2415 2639 -674 1934 113 7 28 chr2 234714012 234714296 -18542287 - AluSx SINE Alu 0 312 35 520 292 168 86 chr2 234714296 234714671 -18541912 + L2 LINE L2 2639 3097 -216 2057 115 0 7 chr2 234714671 234714957 -18541626 - AluJo SINE Alu -24 288 5 520 292 168 86 chr2 234714957 234715148 -18541435 + L2 LINE L2 3097 3271 -42 758 48 0 19 chr2 234715153 234715257 -18541326 + (TAGA)n Simple_repeat Simple_repeat 4 105 0 191 188 21 0 chr2 234715261 234715309 -18541274 + (TGGA)n Simple_repeat Simple_repeat 1 49 0 234 282 87 24 chr2 234715572 234715702 -18540881 + MIR3 SINE MIR 69 207 -1 238 353 135 6 chr2 234716539 234716695 -18539888 - MER5B DNA MER1_type -2 176 1 1751 124 0 4 chr2 234717657 234717906 -18538677 - AluSx SINE Alu -27 285 38 22 0 0 0 chr2 234719309 234719331 -18537252 + AT_rich Low_complexity Low_complexity 1 22 0 535 281 73 50 chr2 234721160 234721477 -18535106 + L1ME LINE L1 5325 5648 -473 1075 313 48 33 chr2 234721477 234721959 -18534624 + MLT1J LTR MaLR 3 491 -20 259 209 108 93 chr2 234722044 234722173 -18534410 + L1ME LINE L1 5745 5875 -246 764 146 57 16 chr2 234722778 234722901 -18533682 - FLAM_C SINE Alu -5 128 1 2241 97 7 26 chr2 234723357 234723665 -18532918 - AluSc SINE Alu -7 302 1 231 336 70 37 chr2 234723687 234723958 -18532625 - L1MEd LINE L1 -5279 840 561 2036 304 42 45 chr2 234724482 234725366 -18531217 + MER90-int LTR ERV1 2145 3025 -1622 386 332 62 56 chr2 234726193 234726660 -18529923 + MER90-int LTR ERV1 6168 6637 -164 732 220 29 83 chr2 234726828 234726845 -18529738 + MER90 LTR ERV1 2 18 -557 330 45 0 0 chr2 234726845 234726889 -18529694 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 732 220 29 83 chr2 234726889 234727148 -18529435 + MER90 LTR ERV1 18 263 -312 809 217 53 16 chr2 234727188 234727377 -18529206 + MER90 LTR ERV1 419 614 0 2355 111 39 39 chr2 234728737 234729099 -18527484 + THE1B LTR MaLR 1 362 -2 2236 102 0 40 chr2 234729826 234730150 -18526433 - AluY SINE Alu 0 311 1 2959 78 95 5 chr2 234730281 234730692 -18525891 + LTR7 LTR ERV1 1 448 -2 20943 89 9 23 chr2 234730694 234733730 -18522853 + HERVH LTR ERV1 1 2992 -4721 871 155 20 0 chr2 234733716 234733864 -18522719 + HERVH LTR ERV1 3140 3290 -4423 * 3439 107 4 6 chr2 234733854 234734357 -18522226 + HERVH LTR ERV1 3492 3993 -3720 4315 133 23 1 chr2 234734359 234735007 -18521576 + HERVH LTR ERV1 4488 5149 -2564 1356 143 19 0 chr2 234735008 234735224 -18521359 + HERVH LTR ERV1 5600 5819 -1894 2521 85 48 13 chr2 234735224 234735601 -18520982 + HERVH LTR ERV1 7324 7713 0 3024 68 95 5 chr2 234735601 234736012 -18520571 + LTR7 LTR ERV1 1 448 -2 1973 94 8 4 chr2 234736179 234736435 -18520148 + AluSx SINE Alu 33 289 -23 2265 183 101 7 chr2 234736571 234736998 -18519585 - MER70A LTR ERVL -2 470 4 520 246 63 72 chr2 234737082 234737112 -18519471 - L1MC5 LINE L1 -36 7925 7896 4333 108 2 0 chr2 234737112 234737665 -18518918 - MER41A LTR ERV1 0 554 1 520 246 63 72 chr2 234737665 234737717 -18518866 - L1MC5 LINE L1 -65 7896 7845 2032 188 29 63 chr2 234737717 234738239 -18518344 + MLT1D LTR MaLR 1 504 -1 520 246 63 72 chr2 234738239 234738270 -18518313 - L1MC5 LINE L1 -116 7845 7815 210 37 0 0 chr2 234738270 234738297 -18518286 + (CA)n Simple_repeat Simple_repeat 1 27 0 520 246 63 72 chr2 234738297 234738595 -18517988 - L1MC5 LINE L1 -146 7815 7516 744 198 57 52 chr2 234738616 234738808 -18517775 - MER3 DNA MER1_type 0 209 17 225 240 0 0 chr2 234738815 234738890 -18517693 + CT-rich Low_complexity Low_complexity 1 75 0 516 242 15 51 chr2 234738899 234739039 -18517544 - L1MC5 LINE L1 -414 7394 7354 2237 116 3 0 chr2 234739039 234739349 -18517234 - AluY SINE Alu 0 311 1 516 242 15 51 chr2 234739349 234739441 -18517142 - L1MC5 LINE L1 -454 7354 7260 2170 103 3 0 chr2 234739485 234739767 -18516816 + AluSx SINE Alu 3 285 -27 285 118 0 0 chr2 234739767 234739818 -18516765 + (TA)n Simple_repeat Simple_repeat 1 51 0 1295 188 53 43 chr2 234740341 234740623 -18515960 + AluJb SINE Alu 1 285 -27 642 212 28 14 chr2 234740814 234740997 -18515586 + L1ME1 LINE L1 5995 6184 0 504 145 0 13 chr2 234741129 234741205 -18515378 + Tigger5 DNA MER2_type 8 82 -2241 * 884 131 17 63 chr2 234741195 234741370 -18515213 + Tigger5 DNA MER2_type 2081 2247 -76 2349 144 15 3 chr2 234741523 234741856 -18514727 + MER1B DNA MER1_type 1 337 0 1397 164 96 10 chr2 234743131 234743424 -18513159 + MER33 DNA MER1_type 1 318 -6 2127 116 3 0 chr2 234743923 234744215 -18512368 + AluSx SINE Alu 13 305 -7 2197 99 0 33 chr2 234745263 234745566 -18511017 + AluSq SINE Alu 1 293 -20 867 268 14 0 chr2 234746306 234746515 -18510068 + MIR SINE MIR 47 258 -4 233 283 71 30 chr2 234748386 234748485 -18508098 + L2 LINE L2 1372 1474 -1840 1133 205 48 29 chr2 234748507 234748884 -18507699 + MLT1F1 LTR MaLR 141 561 -6 1012 209 206 57 chr2 234748892 234749333 -18507250 - L1MEc LINE L1 -4119 2277 1771 2067 218 103 39 chr2 234749336 234750123 -18506460 + L1ME1 LINE L1 4950 5821 -345 2257 110 0 10 chr2 234750123 234750431 -18506152 + AluSq SINE Alu 1 305 -8 2067 218 103 39 chr2 234750431 234750728 -18505855 + L1ME1 LINE L1 5821 6098 -68 259 233 108 101 chr2 234750630 234750759 -18505824 + L1MA10 LINE L1 6169 6298 -36 * 1168 188 27 27 chr2 234750897 234751121 -18505462 + AluJo SINE Alu 65 288 -24 283 203 38 25 chr2 234751146 234751225 -18505358 - MER116 DNA Mariner 0 80 1 249 249 21 95 chr2 234751225 234751414 -18505169 - L2 LINE L2 -151 3162 2988 550 68 0 27 chr2 234751414 234751480 -18505103 - L1PA5 LINE L1 -251 5904 5839 2036 57 4 0 chr2 234751480 234751713 -18504870 + L1PA5 LINE L1 5910 6154 0 227 328 66 33 chr2 234751721 234751843 -18504740 - L2 LINE L2 -317 2996 2871 384 155 0 0 chr2 234752924 234752995 -18503588 + G-rich Low_complexity Low_complexity 3 73 0 679 194 0 30 chr2 234753019 234753153 -18503430 + MER45 DNA AcHobo 1 130 -823 442 326 106 0 chr2 234753311 234753529 -18503054 + MER45C DNA AcHobo 713 953 0 2156 135 0 0 chr2 234753750 234754054 -18502529 + AluSq SINE Alu 10 313 0 276 259 121 43 chr2 234754130 234754246 -18502337 - L2 LINE L2 -237 3035 2911 181 319 111 0 chr2 234754555 234754627 -18501956 - L2 LINE L2 -6 3266 3187 2127 125 3 0 chr2 234755211 234755500 -18501083 + AluSx SINE Alu 1 290 -22 230 95 24 0 chr2 234755511 234755553 -18501030 + (GA)n Simple_repeat Simple_repeat 2 44 0 * 252 86 0 0 chr2 234755550 234755585 -18500998 + (GGAA)n Simple_repeat Simple_repeat 4 38 0 350 176 137 84 chr2 234755846 234755977 -18500606 + MLT1E2 LTR MaLR 1 138 -488 390 325 60 47 chr2 234755978 234756293 -18500290 - L2 LINE L2 -213 3059 2743 333 0 0 0 chr2 234756801 234756838 -18499745 + (CA)n Simple_repeat Simple_repeat 2 38 0 402 250 22 0 chr2 234757373 234757465 -18499118 - MER5B DNA MER1_type -6 172 79 190 200 50 0 chr2 234757774 234757814 -18498769 - MIR SINE MIR -81 127 86 483 184 8 53 chr2 234758759 234759013 -18497570 + AluJo SINE Alu 5 305 -7 200 143 0 0 chr2 234762311 234762339 -18494244 + L2 LINE L2 3204 3231 -41 220 263 32 53 chr2 234762502 234762597 -18493986 - L2 LINE L2 -226 3087 2995 602 263 189 7 chr2 234762628 234762925 -18493658 - L2 LINE L2 -426 2888 2538 328 341 39 23 chr2 234763395 234763524 -18493059 - L2 LINE L2 -16 3256 3126 1555 151 55 38 chr2 234763675 234763967 -18492616 + AluJo SINE Alu 1 297 -15 268 308 0 22 chr2 234764151 234764242 -18492341 + MER5B DNA MER1_type 86 174 -4 641 246 41 12 chr2 234764739 234764910 -18491673 + L1ME1 LINE L1 5983 6158 -8 2415 77 3 10 chr2 234765666 234765979 -18490604 + AluY SINE Alu 1 311 0 291 28 0 0 chr2 234766615 234766651 -18489932 + (CA)n Simple_repeat Simple_repeat 2 37 0 1761 130 0 106 chr2 234766656 234766995 -18489588 + AluJb SINE Alu 1 303 -9 1918 143 11 0 chr2 234767066 234767345 -18489238 + AluSx SINE Alu 20 301 -11 340 280 54 48 chr2 234767594 234767762 -18488821 + MIR SINE MIR 81 249 -13 232 284 185 17 chr2 234767912 234768064 -18488519 + MIR SINE MIR 16 186 -61 840 135 0 57 chr2 234768910 234769051 -18487532 - FLAM_C SINE Alu -9 134 2 2267 114 0 6 chr2 234769312 234769627 -18486956 - AluSq SINE Alu 0 313 1 23 33 0 0 chr2 234770100 234770130 -18486453 + AT_rich Low_complexity Low_complexity 1 30 0 2309 174 62 2 chr2 234770459 234770861 -18485722 + MSTB LTR MaLR 1 426 0 317 266 0 0 chr2 234770879 234770943 -18485640 + FRAM/FAM SINE Alu 1 64 -102 280 194 11 86 chr2 234771313 234771406 -18485177 + L1ME4a LINE L1 5959 6044 -77 2102 130 7 0 chr2 234771444 234771737 -18484846 + AluSx SINE Alu 1 295 -17 2253 92 3 7 chr2 234772426 234772741 -18483842 - AluSq SINE Alu 0 313 1 215 310 115 0 chr2 234772784 234772871 -18483712 + MIR3 SINE MIR 108 204 -4 2121 114 4 0 chr2 234773414 234773719 -18482864 + AluSp SINE Alu 4 309 0 1778 177 9 25 chr2 234775430 234775747 -18480836 + AluJo SINE Alu 1 312 0 399 209 45 9 chr2 234777343 234777453 -18479130 + L1P LINE L1 5309 5422 -729 680 291 73 33 chr2 234777597 234777996 -18478587 + L1ME4a LINE L1 5657 6071 -50 2572 149 28 33 chr2 234778002 234778432 -18478151 - MSTA LTR MaLR 0 428 1 10077 164 31 4 chr2 234778432 234780039 -18476544 - MSTA-int LTR MaLR 0 1651 1 839 157 61 65 chr2 234780039 234780242 -18476341 - MSTB LTR MaLR 0 426 202 798 196 0 0 chr2 234781955 234782088 -18474495 + FLAM_A SINE Alu 1 133 0 320 257 53 46 chr2 234782391 234782543 -18474040 + L1ME2 LINE L1 3083 3235 -2911 1497 98 0 0 chr2 234782556 234782749 -18473834 + AluY SINE Alu 1 193 -118 230 54 0 0 chr2 234782749 234782786 -18473797 + AluY SINE Alu 261 297 -2 1113 162 31 59 chr2 234782825 234783047 -18473536 + MER20 DNA MER1_type 4 219 0 358 307 108 24 chr2 234783386 234783757 -18472826 + L1ME2 LINE L1 3555 3956 -2190 28 53 0 40 chr2 234784940 234785015 -18471568 + AT_rich Low_complexity Low_complexity 1 72 0 678 277 109 13 chr2 234785114 234785352 -18471231 + MLT1K LTR MaLR 324 584 -4 565 318 72 46 chr2 234785512 234786088 -18470495 + L1ME2 LINE L1 5275 5884 -280 2327 87 0 0 chr2 234786093 234786381 -18470202 + AluSx SINE Alu 15 302 -10 801 161 14 42 chr2 234786988 234787131 -18469452 + AluJo SINE Alu 1 139 -173 326 167 18 3 chr2 234787131 234787196 -18469387 - AluJb SINE Alu -85 217 164 984 127 0 0 chr2 234787213 234787355 -18469228 + AluJb SINE Alu 168 309 -3 1925 108 3 89 chr2 234787714 234788039 -18468544 + AluSx SINE Alu 1 297 -15 374 124 10 52 chr2 234788943 234789040 -18467543 + (TCC)n Simple_repeat Simple_repeat 2 94 0 21 36 0 0 chr2 234789871 234789899 -18466684 + AT_rich Low_complexity Low_complexity 1 28 0 2015 83 66 0 chr2 234790480 234790768 -18465815 + AluY SINE Alu 1 307 -4 2095 139 0 7 chr2 234791884 234792185 -18464398 + AluSg SINE Alu 1 299 -11 25 0 0 0 chr2 234792185 234792210 -18464373 + AT_rich Low_complexity Low_complexity 1 25 0 2375 78 0 3 chr2 234792490 234792783 -18463800 + AluSx SINE Alu 1 292 -20 2419 176 51 34 chr2 234793028 234793555 -18463028 + MER74A LTR ERVL 1 536 -22 23 0 0 0 chr2 234793778 234793801 -18462782 + AT_rich Low_complexity Low_complexity 1 23 0 2173 131 0 3 chr2 234793985 234794298 -18462285 + AluSq SINE Alu 1 312 -1 338 339 60 22 chr2 234795031 234795214 -18461369 - MER91B DNA MER1_type 0 190 1 1464 172 100 0 chr2 234795581 234795842 -18460741 + AluJo SINE Alu 1 287 -25 664 180 17 22 chr2 234795873 234796051 -18460532 + GA-rich Low_complexity Low_complexity 3 179 0 1897 176 135 31 chr2 234796259 234796673 -18459910 - MSTB2 LTR MaLR 0 457 1 1291 204 8 4 chr2 234797006 234797246 -18459337 - MLT1D LTR MaLR 0 505 265 711 142 123 7 chr2 234797279 234797434 -18459149 - MLT1D LTR MaLR -308 197 25 504 188 182 29 chr2 234797471 234797641 -18458942 + MIR SINE MIR 20 215 -47 2501 47 0 0 chr2 234798268 234798567 -18458016 + AluY SINE Alu 1 299 -12 255 284 15 0 chr2 234800418 234800485 -18456098 - L2 LINE L2 -43 3270 3203 1436 188 118 61 chr2 234800607 234801049 -18455534 + MLT1C LTR MaLR 1 467 0 2371 131 29 27 chr2 234801151 234801525 -18455058 + THE1C LTR MaLR 1 375 0 331 349 28 24 chr2 234801688 234801900 -18454683 + MLT1K LTR MaLR 126 338 -250 242 232 53 93 chr2 234802341 234802492 -18454091 - LTR67 LTR ERVL 0 557 413 1380 192 58 60 chr2 234803548 234803892 -18452691 + MLT1A1 LTR MaLR 1 345 -20 2614 131 17 0 chr2 234803892 234804250 -18452333 + THE1B LTR MaLR 1 364 0 1380 192 58 60 chr2 234804250 234804270 -18452313 + MLT1A1 LTR MaLR 345 364 -1 184 261 15 31 chr2 234804333 234804398 -18452185 - L2 LINE L2 -3 3310 3247 574 316 96 0 chr2 234804671 234804880 -18451703 + MIR SINE MIR 12 240 -22 5938 94 13 1 chr2 234804949 234805770 -18450813 + L1PA13 LINE L1 5333 6163 0 25 31 0 0 chr2 234806198 234806230 -18450353 + AT_rich Low_complexity Low_complexity 1 32 0 205 203 0 29 chr2 234806672 234806741 -18449842 + GA-rich Low_complexity Low_complexity 5 71 0 15315 106 17 70 chr2 234807327 234807809 -18448774 + Tigger1 DNA MER2_type 1 507 -1911 1889 87 65 33 chr2 234807809 234808124 -18448459 + AluSx SINE Alu 1 324 0 15315 106 17 70 chr2 234808124 234810177 -18446406 + Tigger1 DNA MER2_type 507 2401 -17 21 71 0 0 chr2 234810569 234810611 -18445972 + AT_rich Low_complexity Low_complexity 1 42 0 215 342 58 25 chr2 234810672 234810792 -18445791 - MIR SINE MIR -55 153 30 2255 147 37 34 chr2 234810843 234811395 -18445188 + MLT2A2 LTR ERVL 1 554 0 189 74 0 0 chr2 234813233 234813260 -18443323 + (TTC)n Simple_repeat Simple_repeat 1 27 0 201 156 22 22 chr2 234813945 234813990 -18442593 + L2 LINE L2 3224 3268 -4 2816 153 49 6 chr2 234814767 234814837 -18441746 + L1MC1 LINE L1 5821 5887 -446 1554 178 8 0 chr2 234814837 234815096 -18441487 + AluJo SINE Alu 14 274 -38 2816 153 49 6 chr2 234815096 234815515 -18441068 + L1MC1 LINE L1 5887 6331 -2 180 77 0 0 chr2 234815613 234815639 -18440944 + (CA)n Simple_repeat Simple_repeat 1 26 0 1067 151 178 0 chr2 234815769 234816013 -18440570 - MER58B DNA MER1_type -1 340 59 2195 110 7 0 chr2 234816054 234816346 -18440237 - AluSp SINE Alu -9 304 11 548 284 24 0 chr2 234816746 234816915 -18439668 - MER5B DNA MER1_type -5 173 1 257 180 0 16 chr2 234817089 234817150 -18439433 + CT-rich Low_complexity Low_complexity 3 62 0 213 121 0 0 chr2 234818548 234818581 -18438002 + (TC)n Simple_repeat Simple_repeat 2 34 0 698 315 86 40 chr2 234818842 234819642 -18436941 + L2 LINE L2 1855 2691 -623 550 226 23 8 chr2 234820047 234820180 -18436403 + MIR SINE MIR 57 191 -71 326 380 42 6 chr2 234820275 234820441 -18436142 + L2 LINE L2 3101 3272 0 2209 139 34 5 chr2 234822011 234822393 -18434190 + L1MB4 LINE L1 5782 6174 -6 2248 110 3 0 chr2 234822579 234822880 -18433703 - AluSx SINE Alu -10 302 1 188 271 96 39 chr2 234823171 234823400 -18433183 - L2 LINE L2 -814 2500 2259 1205 163 9 41 chr2 234823500 234823721 -18432862 + MER20 DNA MER1_type 1 214 -5 405 0 0 0 chr2 234823763 234823808 -18432775 + (CA)n Simple_repeat Simple_repeat 2 46 0 2550 48 0 10 chr2 234824342 234824651 -18431932 - AluY SINE Alu -5 306 1 2239 121 0 3 chr2 234824709 234825016 -18431567 + AluSg SINE Alu 1 306 -4 469 277 15 7 chr2 234825331 234825468 -18431115 + MIR SINE MIR 17 154 -108 231 273 129 72 chr2 234825545 234825809 -18430774 + MARNA DNA Mariner 83 361 -225 1503 205 7 13 chr2 234825814 234826112 -18430471 + AluJo SINE Alu 6 301 -11 2075 143 0 0 chr2 234826121 234826415 -18430168 + AluJb SINE Alu 1 294 -18 1046 189 36 0 chr2 234826520 234826716 -18429867 - MER3 DNA MER1_type -4 205 3 408 294 125 18 chr2 234827721 234828048 -18428535 + L2 LINE L2 2014 2375 -939 305 228 54 11 chr2 234829712 234829804 -18426779 - L2 LINE L2 -30 3283 3188 279 261 99 43 chr2 234830474 234830635 -18425948 + MLT1K LTR MaLR 317 486 -102 261 139 0 0 chr2 234830673 234830716 -18425867 + (TTCTC)n Simple_repeat Simple_repeat 3 45 0 2434 111 11 27 chr2 234830725 234831093 -18425490 + THE1B LTR MaLR 1 362 -2 3365 62 7 0 chr2 234831095 234831513 -18425070 + THE1B-int LTR MaLR 1 421 -1159 1323 127 26 26 chr2 234831538 234831767 -18424816 + THE1B LTR MaLR 135 363 -1 1933 138 0 0 chr2 234831767 234832042 -18424541 - AluSx SINE Alu -33 279 5 2021 140 3 3 chr2 234832343 234832635 -18423948 + AluSx SINE Alu 1 292 -20 339 227 72 0 chr2 234833314 234833411 -18423172 + MIR SINE MIR 88 191 -71 213 265 0 44 chr2 234833565 234833633 -18422950 - MIR SINE MIR -61 147 83 729 146 0 36 chr2 234833783 234833920 -18422663 + L1PA8 LINE L1 6041 6172 0 1098 178 9 22 chr2 234833955 234834186 -18422397 + AluJo SINE Alu 82 309 -3 512 248 112 12 chr2 234834450 234834611 -18421972 - MER5B DNA MER1_type 0 178 2 39 38 0 0 chr2 234836204 234836257 -18420326 + AT_rich Low_complexity Low_complexity 1 53 0 673 193 33 80 chr2 234836260 234836318 -18420265 - MIR SINE MIR -14 248 189 2195 104 7 7 chr2 234836318 234836615 -18419968 - AluSx SINE Alu -15 297 1 673 193 33 80 chr2 234836615 234836768 -18419815 - MIR SINE MIR -73 189 47 1842 117 39 0 chr2 234836996 234837292 -18419291 + AluSx SINE Alu 17 322 0 832 213 0 6 chr2 234837384 234837548 -18419035 + FRAM SINE Alu 1 158 -18 217 240 170 20 chr2 234839124 234839224 -18417359 - L2 LINE L2 -414 2900 2786 248 293 0 0 chr2 234840120 234840195 -18416388 - MIR SINE MIR -131 131 57 2510 123 6 8 chr2 234840367 234840732 -18415851 - THE1B LTR MaLR 0 364 1 396 0 0 0 chr2 234840807 234840851 -18415732 + (CA)n Simple_repeat Simple_repeat 2 45 0 254 160 0 0 chr2 234841566 234841616 -18414967 + L1MC/D LINE L1 5767 5816 -1992 2324 100 0 0 chr2 234841632 234841932 -18414651 + AluSx SINE Alu 1 300 -12 1661 183 9 46 chr2 234841943 234842266 -18414317 + AluJb SINE Alu 1 311 -1 1174 215 106 83 chr2 234842286 234842591 -18413992 - MER34C LTR ERV1 0 585 260 1381 97 0 0 chr2 234842591 234842786 -18413797 + L1MA4 LINE L1 6095 6289 -11 1174 215 106 83 chr2 234842786 234843047 -18413536 - MER34C LTR ERV1 -325 260 6 1831 141 0 50 chr2 234843274 234843593 -18412990 + AluJb SINE Alu 6 308 -4 331 302 32 7 chr2 234843595 234843810 -18412773 + L1ME3A LINE L1 5744 5968 -196 399 333 92 54 chr2 234844358 234844694 -18411889 - L2 LINE L2 -16 3256 2908 705 208 7 7 chr2 234844887 234845036 -18411547 - MIR SINE MIR 0 262 114 24 53 0 0 chr2 234845129 234845167 -18411416 + AT_rich Low_complexity Low_complexity 1 38 0 222 303 169 0 chr2 234845204 234845293 -18411290 + L2 LINE L2 3155 3258 -14 2000 142 0 0 chr2 234846820 234847102 -18409481 - AluSx SINE Alu -30 282 1 2072 139 7 0 chr2 234847298 234847600 -18408983 + AluSx SINE Alu 1 304 -8 225 0 0 0 chr2 234847625 234847650 -18408933 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 1417 188 3 76 chr2 234847880 234848183 -18408400 - AluJo SINE Alu -31 281 1 2176 132 0 0 chr2 234848665 234848968 -18407615 - AluSx SINE Alu -9 303 1 579 261 36 35 chr2 234849139 234849468 -18407115 + L1MC5 LINE L1 7491 7866 -176 2292 115 0 0 chr2 234849786 234850091 -18406492 + AluSg SINE Alu 4 308 -2 207 69 0 0 chr2 234851410 234851439 -18405144 + (CA)n Simple_repeat Simple_repeat 2 30 0 1778 152 14 14 chr2 234851448 234851768 -18404815 - AluJb SINE Alu 0 320 1 2437 89 3 0 chr2 234852030 234852332 -18404251 + AluSp SINE Alu 2 304 -9 2081 113 4 0 chr2 234852879 234853154 -18403429 - AluSx SINE Alu -36 276 1 2324 87 7 3 chr2 234853243 234853542 -18403041 + AluY SINE Alu 1 300 -11 35 24 0 0 chr2 234853712 234853754 -18402829 + AT_rich Low_complexity Low_complexity 1 42 0 772 170 7 22 chr2 234853760 234853895 -18402688 + FLAM_A SINE Alu 1 133 0 180 0 0 0 chr2 234854138 234854158 -18402425 + (CA)n Simple_repeat Simple_repeat 2 21 0 389 361 68 40 chr2 234854304 234854768 -18401815 - L2 LINE L2 -10 3262 2773 351 186 35 0 chr2 234854801 234854887 -18401696 - L1MD3 LINE L1 -2 7993 7905 280 188 38 38 chr2 234854887 234854967 -18401616 + LTR66 LTR ERVL 359 438 -172 297 167 0 0 chr2 234854969 234855023 -18401560 + (TA)n Simple_repeat Simple_repeat 1 54 0 489 212 0 99 chr2 234855023 234855174 -18401409 - L1MD2 LINE L1 -124 6235 6100 418 316 201 35 chr2 234855187 234855700 -18400883 - L2 LINE L2 -583 2731 2134 185 313 54 45 chr2 234855764 234855876 -18400707 + L2 LINE L2 3182 3294 -19 1443 171 16 96 chr2 234856063 234856204 -18400379 + AluJo SINE Alu 1 103 -209 2127 131 0 0 chr2 234856204 234856486 -18400097 + AluSx SINE Alu 1 282 -30 1443 171 16 96 chr2 234856486 234856666 -18399917 + AluJo SINE Alu 103 296 -16 6499 138 21 25 chr2 234856751 234858585 -18397998 + L1MA5 LINE L1 4483 6300 0 2062 136 0 10 chr2 234858620 234858914 -18397669 + AluSx SINE Alu 1 291 -21 2098 114 58 47 chr2 234859255 234859615 -18396968 + THE1B LTR MaLR 1 364 0 318 242 225 0 chr2 234859945 234860065 -18396518 - L2 LINE L2 0 3313 3167 1490 214 16 47 chr2 234860201 234860313 -18396270 + MLT1A2 LTR MaLR 3 117 -257 2041 147 131 11 chr2 234860313 234860695 -18395888 + MSTA LTR MaLR 1 428 0 1490 214 16 47 chr2 234860695 234860966 -18395617 + MLT1A2 LTR MaLR 117 374 0 207 69 0 0 chr2 234861954 234861983 -18394600 + (TTCA)n Simple_repeat Simple_repeat 2 30 0 2345 44 41 10 chr2 234861995 234862288 -18394295 - AluY SINE Alu -9 302 1 463 116 11 11 chr2 234862333 234862428 -18394155 + (CA)n Simple_repeat Simple_repeat 1 95 0 465 208 243 6 chr2 234862844 234863017 -18393566 + LTR33 LTR ERVL 1 214 -307 487 286 44 5 chr2 234863072 234863275 -18393308 + LTR33 LTR ERVL 304 514 -7 190 201 40 75 chr2 234863290 234863371 -18393212 + MIR SINE MIR 25 103 -105 295 178 0 0 chr2 234863409 234863453 -18393130 - AluJo SINE Alu -28 274 231 3213 168 165 31 chr2 234863453 234864296 -18392287 + LTR28 LTR ERV1 1 1020 0 895 180 67 0 chr2 234864296 234864474 -18392109 - AluJo SINE Alu -79 233 44 243 331 62 8 chr2 234864491 234864621 -18391962 + MIR SINE MIR 123 259 -3 551 239 72 60 chr2 234864812 234865097 -18391486 + MER39 LTR ERV1 50 523 -182 1375 135 14 125 chr2 234865106 234865403 -18391180 + AluJb SINE Alu 34 297 -15 453 151 193 16 chr2 234865411 234865552 -18391031 + MER34 LTR ERV1 372 707 0 370 307 111 27 chr2 234865790 234866122 -18390461 + L2 LINE L2 2187 2546 -768 288 302 0 10 chr2 234866283 234866379 -18390204 - MIR SINE MIR -31 231 137 2178 127 3 10 chr2 234866381 234866695 -18389888 - AluSx SINE Alu 0 312 1 2481 48 30 0 chr2 234866707 234867002 -18389581 - AluY SINE Alu -7 304 1 182 245 61 0 chr2 234867586 234867635 -18388948 + L2 LINE L2 3221 3272 0 2395 77 82 82 chr2 234868452 234868829 -18387754 + MER51B LTR ERV1 1 377 0 189 0 0 0 chr2 234868862 234868883 -18387700 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2189 102 0 0 chr2 234868886 234869160 -18387423 - AluSx SINE Alu -32 280 7 836 229 103 62 chr2 234869991 234870506 -18386077 + MLT1H1 LTR MaLR 12 547 -8 2690 141 33 26 chr2 234870733 234871158 -18385425 + MSTC LTR MaLR 1 428 0 2493 188 84 4 chr2 234871798 234872276 -18384307 + MLT2B1 LTR ERVL 5 520 0 228 163 0 0 chr2 234872286 234872329 -18384254 + CT-rich Low_complexity Low_complexity 1 43 0 1894 124 102 13 chr2 234873511 234873826 -18382757 - MER2 DNA MER2_type -1 343 1 212 235 20 0 chr2 234874072 234874123 -18382460 - MIR SINE MIR -118 144 93 225 154 0 0 chr2 234874444 234874483 -18382100 + T-rich Low_complexity Low_complexity 1 39 0 2047 100 12 40 chr2 234875308 234875629 -18380954 + AluSx SINE Alu 1 312 0 351 285 147 72 chr2 234875864 234876362 -18380221 + L1M2 LINE L1 857 1391 -5458 2573 38 0 0 chr2 234876879 234877171 -18379412 - AluY SINE Alu -19 292 1 217 270 68 14 chr2 234877994 234878068 -18378515 - L3 LINE CR1 -3 1574 1497 766 171 12 35 chr2 234878461 234878611 -18377972 + L1MD1 LINE L1 6027 6175 -67 1505 174 40 14 chr2 234878611 234878934 -18377649 - AluJo SINE Alu 0 331 2 766 171 12 35 chr2 234878934 234878952 -18377631 + L1MD1 LINE L1 6175 6192 -50 257 130 0 0 chr2 234879000 234879046 -18377537 + L1MD2 LINE L1 6313 6358 -1 2194 110 3 7 chr2 234879096 234879397 -18377186 - AluSx SINE Alu -12 300 1 284 328 16 8 chr2 234879592 234879714 -18376869 - L1 LINE L1 -2439 3707 3585 2171 69 46 26 chr2 234879724 234880027 -18376556 + AluSc SINE Alu 1 309 0 226 283 9 18 chr2 234880168 234880281 -18376302 - L1 LINE L1 -2660 3486 3375 1847 146 4 0 chr2 234880420 234880694 -18375889 - AluSx SINE Alu -11 301 27 231 314 13 39 chr2 234880713 234880866 -18375717 - L1 LINE L1 -3149 2997 2849 2465 79 0 16 chr2 234880943 234881261 -18375322 - AluSq SINE Alu 0 313 1 36 53 0 0 chr2 234881373 234881430 -18375153 + AT_rich Low_complexity Low_complexity 1 57 0 319 271 0 69 chr2 234881430 234881574 -18375009 - L1 LINE L1 -3784 2362 2229 2402 86 10 0 chr2 234881587 234881891 -18374692 + AluSx SINE Alu 1 307 -5 1769 183 89 9 chr2 234881898 234882236 -18374347 + MLT1A1 LTR MaLR 1 365 0 23 0 0 0 chr2 234884105 234884128 -18372455 + AT_rich Low_complexity Low_complexity 1 23 0 2425 100 0 0 chr2 234884309 234884618 -18371965 - AluSc SINE Alu 0 309 1 257 155 28 84 chr2 234884948 234885019 -18371564 - L1MC4 LINE L1 -1340 6702 6636 26 0 0 0 chr2 234885052 234885078 -18371505 + AT_rich Low_complexity Low_complexity 1 26 0 2169 111 0 0 chr2 234885089 234885377 -18371206 + AluSx SINE Alu 1 288 -24 252 59 0 0 chr2 234885379 234885413 -18371170 + (CTAA)n Simple_repeat Simple_repeat 2 35 0 417 284 26 37 chr2 234885534 234885724 -18370859 - MER5A DNA MER1_type 0 189 2 610 96 0 0 chr2 234886188 234886271 -18370312 - AluSx SINE Alu -13 297 215 1244 113 0 0 chr2 234886271 234886431 -18370152 - AluSx SINE Alu -152 160 1 214 282 13 26 chr2 234886776 234886854 -18369729 - MIR3 SINE MIR -19 189 113 922 80 0 24 chr2 234887174 234887335 -18369248 - AluSg/x SINE Alu 0 312 170 39 38 0 0 chr2 234888161 234888214 -18368369 + AT_rich Low_complexity Low_complexity 1 53 0 741 197 40 76 chr2 234888217 234888275 -18368308 - MIR SINE MIR -14 248 189 1205 232 24 24 chr2 234888275 234888572 -18368011 - AluSx SINE Alu -5 297 1 741 197 40 76 chr2 234888572 234888736 -18367847 - MIR SINE MIR -73 189 34 1801 121 39 0 chr2 234888953 234889210 -18367373 + AluSx SINE Alu 17 283 -29 760 175 25 6 chr2 234889432 234889592 -18366991 - L1MD1 LINE L1 -53 6189 6027 217 270 68 14 chr2 234889985 234890059 -18366524 + L3 LINE CR1 1497 1574 -3 2418 57 3 3 chr2 234890883 234891182 -18365401 + AluY SINE Alu 1 299 -12 2278 82 0 10 chr2 234892198 234892489 -18364094 - AluSx SINE Alu -24 288 1 2758 257 159 38 chr2 234892535 234893944 -18362639 - HAL1 LINE L1 -927 1580 1 318 347 75 20 chr2 234894017 234894182 -18362401 - L1M4 LINE L1 -2944 3202 3012 2153 116 0 0 chr2 234894182 234894492 -18362091 + AluSx SINE Alu 1 310 0 318 347 75 20 chr2 234894492 234894619 -18361964 - L1M4 LINE L1 -3134 3012 2893 890 201 6 6 chr2 234894657 234894826 -18361757 - FRAM SINE Alu -7 169 1 1755 136 139 39 chr2 234896071 234896402 -18360181 - THE1B LTR MaLR 0 364 1 369 343 69 19 chr2 234896892 234897210 -18359373 - HAL1 LINE L1 -874 1633 1300 1697 173 3 16 chr2 234897212 234897524 -18359059 - AluJo SINE Alu -4 308 1 1353 176 0 0 chr2 234897569 234897790 -18358793 - AluJo SINE Alu -10 302 82 22 0 0 0 chr2 234898054 234898076 -18358507 + AT_rich Low_complexity Low_complexity 1 22 0 4821 175 34 20 chr2 234899059 234899345 -18357238 + L1MC2 LINE L1 4707 4987 -1357 1214 180 12 82 chr2 234899345 234899600 -18356983 + MER8 DNA MER2_type 1 237 -2 4821 175 34 20 chr2 234899600 234900799 -18355784 + L1MC2 LINE L1 4987 6344 0 2078 174 81 23 chr2 234901015 234901446 -18355137 + MSTB2 LTR MaLR 1 456 -1 1940 191 69 61 chr2 234901971 234902196 -18354387 + MLT1D LTR MaLR 1 223 -282 2204 100 14 0 chr2 234902196 234902487 -18354096 + AluSg SINE Alu 1 295 -15 1940 191 69 61 chr2 234902487 234902754 -18353829 + MLT1D LTR MaLR 223 497 -8 1884 144 236 6 chr2 234902952 234903300 -18353283 - MSTA LTR MaLR 0 428 1 304 250 33 22 chr2 234903565 234903610 -18352973 - MLT1A1 LTR MaLR 0 365 322 2100 116 0 0 chr2 234903610 234903887 -18352696 - AluSx SINE Alu -35 277 1 304 250 33 22 chr2 234903887 234903933 -18352650 - MLT1A1 LTR MaLR -43 322 273 216 226 0 19 chr2 234905043 234905096 -18351487 - MIR SINE MIR -10 252 201 2153 119 0 3 chr2 234905644 234905938 -18350645 + AluSx SINE Alu 1 293 -19 237 157 39 20 chr2 234906689 234906740 -18349843 + MER5B DNA MER1_type 1 52 -126 275 210 99 111 chr2 234906843 234906931 -18349652 - MARNA DNA Mariner -164 422 335 2313 66 35 0 chr2 234906931 234907220 -18349363 - AluSp SINE Alu -12 301 3 275 210 99 111 chr2 234907220 234907312 -18349271 - MARNA DNA Mariner -251 335 244 283 352 28 9 chr2 234907963 234908071 -18348512 + MIR SINE MIR 23 132 -76 1161 205 3 94 chr2 234908171 234908478 -18348105 + AluJo SINE Alu 1 279 -33 249 33 0 0 chr2 234908478 234908508 -18348075 + (CA)n Simple_repeat Simple_repeat 2 31 0 208 203 0 125 chr2 234908693 234908757 -18347826 - L2 LINE L2 -7 3265 3210 346 314 254 11 chr2 234909525 234909710 -18346873 + MIR SINE MIR 23 252 -10 217 122 0 49 chr2 234911611 234911652 -18344931 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 348 217 63 67 chr2 234913352 234913532 -18343051 + MIR SINE MIR 7 259 -3 23 0 0 0 chr2 234913564 234913587 -18342996 + AT_rich Low_complexity Low_complexity 1 23 0 355 279 112 61 chr2 234913610 234913655 -18342928 - MIR SINE MIR -36 226 185 2335 78 10 0 chr2 234913655 234913950 -18342633 - AluY SINE Alu -13 298 1 355 279 112 61 chr2 234913950 234914101 -18342482 - MIR SINE MIR -77 185 20 545 201 37 82 chr2 234914560 234914644 -18341939 + MER58A DNA MER1_type 1 78 -263 2039 99 27 3 chr2 234914644 234914936 -18341647 - AluSx SINE Alu 0 312 14 545 201 37 82 chr2 234914936 234914985 -18341598 + MER58A DNA MER1_type 78 128 -96 208 316 186 42 chr2 234915381 234915783 -18340800 + L2 LINE L2 1621 1964 -1350 897 214 16 31 chr2 234915783 234915975 -18340608 - MER5A DNA MER1_type 0 189 1 208 316 186 42 chr2 234915975 234916482 -18340101 + L2 LINE L2 1964 2661 -653 306 261 50 62 chr2 234918042 234918203 -18338380 + L1MC4a LINE L1 7474 7632 -176 252 0 0 0 chr2 234918729 234918757 -18337826 + (TGG)n Simple_repeat Simple_repeat 2 29 0 240 257 0 27 chr2 234922330 234922404 -18334179 + (CATATA)n Simple_repeat Simple_repeat 3 74 0 419 323 113 26 chr2 234922565 234922660 -18333923 - L1MC/D LINE L1 -567 5603 5518 1431 197 80 0 chr2 234922660 234922924 -18333659 + AluJb SINE Alu 2 286 -26 419 323 113 26 chr2 234922924 234923243 -18333340 - L1MC/D LINE L1 -652 5518 5261 25131 117 27 79 chr2 234923592 234928476 -18328107 + L1P3 LINE L1 12 4641 -1505 2591 75 25 0 chr2 234928480 234928900 -18327683 + L1P3 LINE L1 5017 5443 -711 3247 49 29 20 chr2 234928900 234929352 -18327231 + LTR13 LTR ERVK 533 988 -19 656 118 67 8 chr2 234929352 234929471 -18327112 + L1PA8 LINE L1 6042 6167 -5 844 146 76 16 chr2 234929561 234929746 -18326837 + L1MA3 LINE L1 6110 6305 0 302 284 150 62 chr2 234929826 234930167 -18326416 - L1MC/D LINE L1 -1446 4700 4330 336 331 56 35 chr2 234930240 234930581 -18326002 - L1MC/D LINE L1 -1922 4224 3877 281 333 0 0 chr2 234930665 234930758 -18325825 - L1MC/D LINE L1 -2310 3836 3744 1816 244 73 14 chr2 234931463 234931967 -18324616 + MLT1F LTR MaLR 1 534 -8 22 0 0 0 chr2 234932021 234932043 -18324540 + AT_rich Low_complexity Low_complexity 1 22 0 182 128 26 0 chr2 234932686 234932725 -18323858 + A-rich Low_complexity Low_complexity 3 42 0 2165 237 77 1 chr2 234933262 234934059 -18322524 + L1ME1 LINE L1 4759 5606 -560 716 228 49 65 chr2 234934125 234934371 -18322212 + L1ME1 LINE L1 5894 6135 -31 189 107 0 0 chr2 234934770 234934798 -18321785 + (TATG)n Simple_repeat Simple_repeat 4 31 0 1750 176 4 0 chr2 234934799 234935077 -18321506 - AluJb SINE Alu -33 279 1 21 57 0 0 chr2 234936053 234936088 -18320495 + AT_rich Low_complexity Low_complexity 1 35 0 195 42 0 0 chr2 234936684 234936708 -18319875 + (TG)n Simple_repeat Simple_repeat 1 24 0 2401 79 13 0 chr2 234939365 234939670 -18316913 - AluSp SINE Alu -3 310 2 188 217 87 0 chr2 234940068 234940114 -18316469 + L2 LINE L2 3262 3311 -2 225 278 21 62 chr2 234941250 234941347 -18315236 - MIR SINE MIR -88 174 82 257 300 77 39 chr2 234941980 234942110 -18314473 - MER5A DNA MER1_type -48 141 7 2183 95 23 0 chr2 234943048 234943353 -18313230 - AluSp SINE Alu -1 312 1 2307 98 3 0 chr2 234943884 234944180 -18312403 - AluSq SINE Alu -14 299 3 1501 175 35 35 chr2 234944192 234944477 -18312106 - AluJo SINE Alu -23 289 5 28 61 0 0 chr2 234944633 234944682 -18311901 + AT_rich Low_complexity Low_complexity 1 49 0 464 42 14 28 chr2 234945430 234945502 -18311081 - AluY SINE Alu -238 71 1 194 253 67 40 chr2 234946326 234946401 -18310182 - L3 LINE CR1 -3 1574 1498 265 171 36 32 chr2 234946774 234947000 -18309583 + (CACCC)n Simple_repeat Simple_repeat 1 227 0 780 196 107 18 chr2 234948222 234948447 -18308136 - MER58B DNA MER1_type 0 341 97 2262 69 0 14 chr2 234949007 234949295 -18307288 + AluY SINE Alu 11 294 -17 1722 169 7 20 chr2 234949541 234949836 -18306747 - AluJb SINE Alu -19 293 3 1078 230 38 0 chr2 234950201 234950440 -18306143 + MER58 DNA MER1_type 2 249 -92 26 0 0 0 chr2 234951911 234951937 -18304646 + AT_rich Low_complexity Low_complexity 1 26 0 2460 66 3 3 chr2 234952417 234952718 -18303865 - AluY SINE Alu -10 301 1 2272 150 42 28 chr2 234953188 234953615 -18302968 + Tigger2a DNA MER2_type 1 433 -1 1790 133 27 20 chr2 234956018 234956312 -18300271 - AluSx SINE Alu -16 296 1 2115 115 10 0 chr2 234956629 234956934 -18299649 - AluSc SINE Alu -1 308 1 2148 96 7 3 chr2 234956963 234957255 -18299328 - AluSc SINE Alu -8 301 9 21 0 0 0 chr2 234957617 234957638 -18298945 + AT_rich Low_complexity Low_complexity 1 21 0 1918 135 28 0 chr2 234957709 234957997 -18298586 + AluSx SINE Alu 1 296 -16 28 86 0 0 chr2 234958229 234958299 -18298284 + AT_rich Low_complexity Low_complexity 1 70 0 1508 209 37 3 chr2 234958481 234958835 -18297748 - L1MB7 LINE L1 -210 5974 5609 303 267 172 17 chr2 234958918 234959034 -18297549 + MIR3 SINE MIR 36 169 -39 1867 134 53 15 chr2 234959374 234959716 -18296867 + MER46B DNA MER2_type 7 236 0 1810 88 52 4 chr2 234961748 234961999 -18294584 - AluSg SINE Alu -12 298 36 21 36 0 0 chr2 234962301 234962329 -18294254 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr2 234962377 234962402 -18294181 + AT_rich Low_complexity Low_complexity 1 25 0 1958 68 4 8 chr2 234962899 234963150 -18293433 + AluY SINE Alu 39 288 -23 25 0 0 0 chr2 234963200 234963225 -18293358 + AT_rich Low_complexity Low_complexity 1 25 0 486 225 232 0 chr2 234963445 234963587 -18292996 + MIR SINE MIR 2 176 -86 3718 164 26 22 chr2 234963671 234964409 -18292174 + L1MB3 LINE L1 5443 6183 0 462 236 127 32 chr2 234965236 234965456 -18291127 + L1MEc LINE L1 2043 2283 -4113 194 302 38 0 chr2 234965550 234965603 -18290980 + MIR SINE MIR 5 59 -203 181 229 42 21 chr2 234965710 234965758 -18290825 + MIR SINE MIR 103 151 -111 279 115 96 0 chr2 234965939 234965991 -18290592 + MIR SINE MIR 173 229 -33 282 242 209 0 chr2 234966408 234966499 -18290084 - MIR3 SINE MIR -43 165 56 1525 141 12 8 chr2 234966619 234966875 -18289708 + AluSq SINE Alu 1 257 -56 382 108 0 0 chr2 234967000 234967065 -18289518 + AluSq SINE Alu 238 302 0 1959 151 3 7 chr2 234967227 234967526 -18289057 - AluSx SINE Alu -14 298 1 242 337 84 0 chr2 234967607 234967702 -18288881 - L2 LINE L2 -4 3309 3207 862 338 171 40 chr2 234967947 234969289 -18287294 - L2 LINE L2 -571 2743 1227 409 257 96 29 chr2 234969396 234969532 -18287051 - MIR SINE MIR 0 262 118 189 107 0 0 chr2 234969595 234969623 -18286960 + (A)n Simple_repeat Simple_repeat 1 28 0 695 65 0 0 chr2 234970839 234971199 -18285384 + AluY SINE Alu 1 360 0 1850 120 66 0 chr2 234971334 234971608 -18284975 - AluSq SINE Alu -21 292 1 266 287 50 10 chr2 234971920 234972021 -18284562 + L2 LINE L2 2205 2309 -1005 377 302 54 8 chr2 234972022 234972151 -18284432 + L2 LINE L2 2738 2872 -442 776 268 113 0 chr2 234972152 234972365 -18284218 + MIR SINE MIR 11 247 -15 707 258 267 21 chr2 234972372 234972705 -18283878 + L2 LINE L2 2863 3277 -36 181 306 42 14 chr2 234972750 234972822 -18283761 + L2 LINE L2 2899 2972 -300 203 259 0 0 chr2 234974962 234975016 -18281567 + MER5B DNA MER1_type 1 54 -124 632 200 0 0 chr2 234975039 234975149 -18281434 + FLAM_A SINE Alu 16 125 -17 5054 163 75 8 chr2 234975162 234976188 -18280395 + L1MC1 LINE L1 5188 6278 -55 1976 120 0 4 chr2 234976198 234976473 -18280110 - AluSx SINE Alu -15 297 24 273 225 56 14 chr2 234976543 234976614 -18279969 + GA-rich Low_complexity Low_complexity 3 76 0 195 211 0 70 chr2 234976651 234976708 -18279875 - MER5B DNA MER1_type -125 53 1 1468 69 11 0 chr2 234976849 234977038 -18279545 - L1PA8A LINE L1 -27 6104 5914 2971 204 95 32 chr2 234977207 234978145 -18278438 + L1ME1 LINE L1 5098 6103 -63 22 70 0 0 chr2 234978167 234978210 -18278373 + AT_rich Low_complexity Low_complexity 1 43 0 948 159 18 24 chr2 234978467 234978637 -18277946 - AluJo SINE Alu -17 295 127 312 178 0 0 chr2 234978637 234978710 -18277873 + (TG)n Simple_repeat Simple_repeat 1 73 0 658 190 0 8 chr2 234978725 234978846 -18277737 - AluJo SINE Alu -192 120 1 1220 153 16 50 chr2 234979636 234979837 -18276746 - MER46A DNA MER2_type -2496 235 42 1740 173 0 23 chr2 234979837 234980144 -18276439 + AluJb SINE Alu 1 300 -12 1220 153 16 50 chr2 234980144 234980184 -18276399 - MER46A DNA MER2_type -2689 42 2 193 318 68 34 chr2 234980208 234980296 -18276287 + MIR3 SINE MIR 70 160 -48 247 299 52 0 chr2 234980556 234980633 -18275950 - L1MC/D LINE L1 -2027 5781 5701 23 33 0 0 chr2 234980652 234980682 -18275901 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr2 234981406 234981434 -18275149 + AT_rich Low_complexity Low_complexity 1 28 0 1479 179 24 17 chr2 234984859 234985171 -18271412 + AluJb SINE Alu 1 312 0 1838 147 10 19 chr2 234985171 234985482 -18271101 + AluSx SINE Alu 1 309 -3 264 341 87 36 chr2 234985615 234985753 -18270830 - MIR3 SINE MIR -55 153 9 246 62 0 0 chr2 234986000 234986032 -18270551 + (CA)n Simple_repeat Simple_repeat 1 32 0 921 321 216 18 chr2 234986121 234986257 -18270326 + L2 LINE L2 2055 2163 -1151 1853 134 84 6 chr2 234986257 234986592 -18269991 - MER46B DNA MER2_type 0 236 1 921 321 216 18 chr2 234986592 234987128 -18269455 + L2 LINE L2 2163 2860 -454 1449 154 93 29 chr2 234987206 234987343 -18269240 - AluJo SINE Alu -15 297 170 2392 74 0 0 chr2 234987343 234987640 -18268943 - AluY SINE Alu -12 299 3 1449 154 93 29 chr2 234987640 234987781 -18268802 - AluJo SINE Alu -142 170 1 771 230 17 6 chr2 234987781 234987948 -18268635 + MER58A DNA MER1_type 38 209 -15 394 380 84 21 chr2 234987952 234988236 -18268347 + L2 LINE L2 2936 3237 -35 1291 234 45 18 chr2 234989676 234990020 -18266563 + MLT1A1 LTR MaLR 1 455 -12 1834 128 4 4 chr2 234990131 234990404 -18266179 + AluSx SINE Alu 40 312 0 308 98 0 0 chr2 234990571 234990622 -18265961 + Alu SINE Alu 247 297 -3 1797 208 99 7 chr2 234991877 234992319 -18264264 - MLT1D LTR MaLR 0 505 23 209 420 17 0 chr2 234992348 234992467 -18264116 + L2 LINE L2 1335 1455 -1859 2162 68 58 41 chr2 234993125 234993420 -18263163 + AluY SINE Alu 1 300 -11 253 268 62 71 chr2 234993448 234993560 -18263023 - MER102a DNA MER1_type 0 330 220 2276 67 3 3 chr2 234993747 234994067 -18262516 + AluY SINE Alu 1 320 0 351 226 75 9 chr2 234994299 234994405 -18262178 + L1ME2 LINE L1 6050 6162 -2 1687 183 0 11 chr2 234994414 234994698 -18261885 + AluJb SINE Alu 1 281 -31 24 32 0 0 chr2 234994701 234994732 -18261851 + AT_rich Low_complexity Low_complexity 1 31 0 1075 74 0 7 chr2 234994928 234995063 -18261520 + AluSq/x SINE Alu 6 139 -174 460 251 47 47 chr2 234995171 234995382 -18261201 + MLT1A2 LTR MaLR 147 357 -17 889 266 39 4 chr2 234996004 234996237 -18260346 + MIR SINE MIR 18 258 -4 3265 170 92 43 chr2 234997617 234998473 -18258110 + L1MC4 LINE L1 7141 7806 -2 189 0 0 0 chr2 234999388 234999409 -18257174 + (A)n Simple_repeat Simple_repeat 1 21 0 3552 242 117 94 chr2 234999901 235000519 -18256064 + L2 LINE L2 1058 1660 -1653 2036 76 32 76 chr2 235000519 235000834 -18255749 + AluY SINE Alu 1 301 -10 3552 242 117 94 chr2 235000834 235000934 -18255649 + L2 LINE L2 1660 1756 -1557 1780 154 3 27 chr2 235000934 235001232 -18255351 + AluJb SINE Alu 13 303 -9 3552 242 117 94 chr2 235001232 235001558 -18255025 + L2 LINE L2 1756 2073 -1240 1956 160 0 3 chr2 235001558 235001870 -18254713 + AluJb SINE Alu 1 311 -1 3552 242 117 94 chr2 235001870 235002997 -18253586 + L2 LINE L2 2073 3288 -25 2090 134 0 0 chr2 235004114 235004413 -18252170 + AluSx SINE Alu 1 299 -13 291 253 205 0 chr2 235004425 235004508 -18252075 - MIR SINE MIR -79 129 30 462 274 179 32 chr2 235004586 235004776 -18251807 + MIR SINE MIR 1 218 -44 2599 175 47 60 chr2 235005287 235005764 -18250819 + Tigger7 DNA MER2_type 1 471 -262 1854 165 14 0 chr2 235005764 235006055 -18250528 + AluSx SINE Alu 2 296 -16 2599 175 47 60 chr2 235006055 235006147 -18250436 + Tigger7 DNA MER2_type 471 563 -170 1373 146 133 20 chr2 235006139 235006441 -18250142 + Tigger7 DNA MER2_type 2152 2487 0 * 478 330 56 31 chr2 235006447 235006771 -18249812 + L2 LINE L2 2214 2545 -769 12624 141 53 14 chr2 235006797 235008967 -18247616 - Tigger2 DNA MER2_type 0 2718 464 1230 182 0 20 chr2 235008967 235009214 -18247369 - AluJo SINE Alu -3 309 68 2209 84 0 10 chr2 235009216 235009513 -18247070 + AluY SINE Alu 1 294 -17 201 294 357 0 chr2 235010086 235010212 -18246371 + L2 LINE L2 3098 3268 -4 198 0 0 0 chr2 235011717 235011739 -18244844 + (A)n Simple_repeat Simple_repeat 1 22 0 195 195 0 49 chr2 235012209 235012250 -18244333 + L2 LINE L2 3222 3260 -12 275 266 124 20 chr2 235013639 235013786 -18242797 - MIR3 SINE MIR -24 184 25 248 309 95 48 chr2 235013914 235014040 -18242543 + MIR3 SINE MIR 44 175 -33 1260 187 10 151 chr2 235014040 235014126 -18242457 + MLT1A1 LTR MaLR 1 97 -268 1289 199 63 11 chr2 235014126 235014413 -18242170 + AluJb SINE Alu 4 305 -7 1260 187 10 151 chr2 235014413 235014744 -18241839 + MLT1A1 LTR MaLR 97 359 -6 243 220 220 28 chr2 235015264 235015405 -18241178 + MER69A DNA AcHobo 10 177 0 314 328 81 38 chr2 235015443 235015678 -18240905 + MIR SINE MIR 9 253 -9 243 222 172 30 chr2 235016507 235016606 -18239977 - MIR SINE MIR -41 221 109 789 251 45 15 chr2 235017344 235017543 -18239040 - MIR SINE MIR 0 262 58 198 202 155 83 chr2 235017621 235017705 -18238878 + L2 LINE L2 3183 3272 0 220 377 0 0 chr2 235018433 235018502 -18238081 + polypurine Low_complexity Low_complexity 4 72 0 321 268 82 36 chr2 235018527 235018721 -18237862 - MARNA DNA Mariner -45 541 339 * 322 294 35 28 chr2 235018713 235018856 -18237727 - MARNA DNA Mariner -364 222 79 581 279 120 10 chr2 235018901 235019047 -18237536 - MIR SINE MIR -24 238 61 2325 70 0 7 chr2 235019047 235019345 -18237238 + AluY SINE Alu 1 296 -15 581 279 120 10 chr2 235019345 235019406 -18237177 - MIR SINE MIR -201 61 8 578 266 193 0 chr2 235019633 235019851 -18236732 + MIR SINE MIR 3 262 0 229 241 0 0 chr2 235019992 235020046 -18236537 + L1ME4a LINE L1 5730 5783 -2002 386 287 7 7 chr2 235020174 235020310 -18236273 + L1ME4a LINE L1 5982 6117 -4 1561 155 0 0 chr2 235022169 235022408 -18234175 + AluSx SINE Alu 8 246 -66 6139 118 8 5 chr2 235022510 235023574 -18233009 + L1PA5 LINE L1 5079 6146 -8 422 289 58 58 chr2 235024168 235024233 -18232350 - MIR SINE MIR -13 249 185 2053 114 0 0 chr2 235024233 235024547 -18232036 + AluY SINE Alu 2 315 0 422 289 58 58 chr2 235024547 235024722 -18231861 - MIR SINE MIR -76 186 8 28 29 0 0 chr2 235025016 235025051 -18231532 + AT_rich Low_complexity Low_complexity 1 35 0 528 223 98 66 chr2 235025782 235026038 -18230545 - MLT1F LTR MaLR -8 534 271 48 60 0 0 chr2 235026640 235026723 -18229860 + GC_rich Low_complexity Low_complexity 1 83 0 23 0 0 0 chr2 235026825 235026848 -18229735 + GC_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 235027031 235027059 -18229524 + GC_rich Low_complexity Low_complexity 1 28 0 769 219 72 60 chr2 235027381 235027646 -18228937 - L1ME1 LINE L1 -5 6161 5894 2261 237 77 1 chr2 235027712 235028509 -18228074 - L1ME1 LINE L1 -560 5606 4759 362 250 69 43 chr2 235029480 235029668 -18226915 + L1MB3 LINE L1 5989 6181 -2 498 232 127 32 chr2 235030497 235030717 -18225866 + L1MEc LINE L1 2043 2283 -4113 191 302 38 0 chr2 235030811 235030864 -18225719 + MIR SINE MIR 5 59 -203 273 115 96 0 chr2 235031200 235031252 -18225331 + MIR SINE MIR 173 229 -33 273 242 209 0 chr2 235031669 235031760 -18224823 - MIR3 SINE MIR -43 165 56 1365 179 3 47 chr2 235031924 235032221 -18224362 + AluJb SINE Alu 12 295 -17 795 217 29 0 chr2 235032615 235032790 -18223793 - L2 LINE L2 -779 2535 2356 1545 241 63 41 chr2 235032958 235033508 -18223075 - L2 LINE L2 -262 3010 2451 2122 103 0 35 chr2 235033508 235033819 -18222764 - AluSg SINE Alu -10 300 1 873 314 33 7 chr2 235033819 235034125 -18222458 - L2 LINE L2 -2999 315 2 247 152 109 0 chr2 235034297 235034343 -18222240 - MADE1 DNA Mariner -28 52 2 362 304 0 18 chr2 235034609 235034721 -18221862 + MIR SINE MIR 142 251 -11 210 344 0 0 chr2 235034733 235034794 -18221789 - MIR SINE MIR -108 154 94 229 244 67 44 chr2 235034798 235034888 -18221695 - MIR SINE MIR -145 117 26 2347 87 0 10 chr2 235035171 235035482 -18221101 + AluSc SINE Alu 1 308 -1 209 327 0 0 chr2 235035489 235035544 -18221039 - MIR SINE MIR -90 118 64 463 303 58 54 chr2 235036727 235036791 -18219792 - MIR SINE MIR -13 249 187 2289 82 0 0 chr2 235036791 235037106 -18219477 + AluY SINE Alu 1 315 0 463 303 58 54 chr2 235037106 235037281 -18219302 - MIR SINE MIR -75 187 8 2250 129 0 0 chr2 235037421 235037731 -18218852 - AluSx SINE Alu -2 310 1 2213 91 0 7 chr2 235038489 235038774 -18217809 + AluSc SINE Alu 1 283 -26 194 313 0 45 chr2 235038805 235038872 -18217711 + MIR SINE MIR 199 262 0 192 284 156 0 chr2 235039767 235039876 -18216707 + MIR SINE MIR 97 222 -40 1080 146 0 6 chr2 235040080 235040245 -18216338 - AluJo SINE Alu -22 290 127 594 196 28 0 chr2 235040247 235040354 -18216229 - MER7A DNA MER2_type -238 108 1 1876 93 127 0 chr2 235040599 235040867 -18215716 - AluSx SINE Alu 0 302 1 1116 166 0 0 chr2 235040888 235041057 -18215526 + FRAM SINE Alu 1 163 -13 2286 106 0 3 chr2 235041659 235041961 -18214622 - AluY SINE Alu -10 301 1 2283 116 0 0 chr2 235041961 235042264 -18214319 - AluSx SINE Alu -9 303 1 395 295 0 18 chr2 235042513 235042625 -18213958 + MIR SINE MIR 142 251 -11 215 339 0 0 chr2 235042633 235042698 -18213885 - MIR SINE MIR -104 158 94 255 162 59 59 chr2 235042702 235042770 -18213813 - MIR SINE MIR -145 117 50 1780 153 0 3 chr2 235043081 235043382 -18213201 + AluSc SINE Alu 3 302 -7 1484 165 56 13 chr2 235044319 235044637 -18211946 - MER33 DNA MER1_type -6 318 1 286 227 68 23 chr2 235044667 235044755 -18211828 + MLT1J LTR MaLR 110 201 -310 2255 86 10 0 chr2 235044779 235045069 -18211514 + AluY SINE Alu 1 293 -18 254 220 0 0 chr2 235045069 235045119 -18211464 + MLT1J2 LTR MaLR 277 326 -124 186 43 0 0 chr2 235045232 235045255 -18211328 + (TG)n Simple_repeat Simple_repeat 2 24 0 22 35 0 0 chr2 235045265 235045294 -18211289 + AT_rich Low_complexity Low_complexity 1 29 0 243 93 0 0 chr2 235045297 235045335 -18211248 + L1M3 LINE L1 5677 5714 -457 2408 86 0 0 chr2 235045485 235045788 -18210795 - AluSc SINE Alu -6 303 1 5071 156 16 44 chr2 235045851 235046716 -18209867 + L1MB3 LINE L1 5025 5851 -332 2273 108 0 0 chr2 235046716 235047013 -18209570 + AluSq SINE Alu 1 297 -16 5071 156 16 44 chr2 235047013 235047329 -18209254 + L1MB3 LINE L1 5851 6175 -8 24 32 0 0 chr2 235047331 235047362 -18209221 + AT_rich Low_complexity Low_complexity 1 31 0 1175 157 73 10 chr2 235047686 235047890 -18208693 - MER20 DNA MER1_type -2 217 1 204 135 0 27 chr2 235049492 235049529 -18207054 + (CAA)n Simple_repeat Simple_repeat 3 38 0 514 169 36 0 chr2 235050376 235050459 -18206124 + AluJb SINE Alu 206 291 -21 2157 124 0 3 chr2 235050462 235050752 -18205831 + AluSx SINE Alu 1 289 -23 939 226 23 51 chr2 235050783 235051040 -18205543 - MLT2D LTR ERVL -164 250 1 2476 78 0 3 chr2 235051127 235051434 -18205149 + AluY SINE Alu 1 306 -5 184 271 83 0 chr2 235051483 235051531 -18205052 - L2 LINE L2 -1 3312 3261 21 57 0 0 chr2 235051818 235051853 -18204730 + AT_rich Low_complexity Low_complexity 1 35 0 1993 107 18 4 chr2 235051874 235052154 -18204429 + AluSp SINE Alu 30 313 0 24 32 0 0 chr2 235052262 235052293 -18204290 + AT_rich Low_complexity Low_complexity 1 31 0 9758 36 5 3 chr2 235052354 235053525 -18203058 - L1PA5 LINE L1 -1160 4986 3814 7771 39 8 0 chr2 235053530 235054709 -18201874 + L1PA5 LINE L1 4955 6141 -13 2258 104 3 7 chr2 235054872 235055181 -18201402 - AluSq SINE Alu -5 308 1 414 276 125 19 chr2 235055252 235055516 -18201067 - L1MC4a LINE L1 -1880 5928 5637 2216 94 0 39 chr2 235055798 235056105 -18200478 - AluSg SINE Alu -10 300 6 2270 91 0 29 chr2 235056423 235056596 -18199987 - AluSg SINE Alu -12 298 136 2450 90 0 0 chr2 235056596 235056897 -18199686 - AluSq SINE Alu -12 301 1 2270 91 0 29 chr2 235056897 235057030 -18199553 - AluSg SINE Alu -174 136 1 304 135 27 0 chr2 235057568 235057642 -18198941 + (CA)n Simple_repeat Simple_repeat 1 76 0 478 193 12 0 chr2 235057677 235057848 -18198735 + (CA)n Simple_repeat Simple_repeat 1 173 0 2248 90 0 17 chr2 235058129 235058457 -18198126 - AluSx SINE Alu 0 312 1 2408 152 107 19 chr2 235058588 235058993 -18197590 - L1MB7 LINE L1 -2 6182 5727 1196 173 166 59 chr2 235058993 235059264 -18197319 - AluJo SINE Alu -2 300 1 2408 152 107 19 chr2 235059264 235059337 -18197246 - L1MB7 LINE L1 -457 5727 5662 189 343 10 29 chr2 235059377 235059479 -18197104 - MIR SINE MIR -80 182 83 2060 79 64 4 chr2 235060424 235060704 -18195879 + AluSp SINE Alu 1 297 -16 390 278 103 81 chr2 235061906 235062226 -18194357 - L1M2 LINE L1 -5849 1000 674 21 36 0 0 chr2 235062429 235062457 -18194126 + GC_rich Low_complexity Low_complexity 1 28 0 318 67 0 0 chr2 235062483 235062528 -18194055 + (CGG)n Simple_repeat Simple_repeat 2 46 0 225 65 0 0 chr2 235062686 235062717 -18193866 + (TCC)n Simple_repeat Simple_repeat 3 33 0 265 333 0 0 chr2 235062739 235062823 -18193760 + G-rich Low_complexity Low_complexity 1 84 0 22 35 0 0 chr2 235064490 235064519 -18192064 + AT_rich Low_complexity Low_complexity 1 29 0 485 229 106 76 chr2 235064519 235064755 -18191828 + MIR SINE MIR 20 262 0 233 200 20 0 chr2 235065408 235065458 -18191125 - L2 LINE L2 0 3313 3263 2211 101 0 7 chr2 235067050 235067346 -18189237 - AluSg SINE Alu -15 295 2 421 248 38 45 chr2 235067520 235067653 -18188930 + AluSq/x SINE Alu 3 134 -179 590 278 68 5 chr2 235068242 235068447 -18188136 + MLT1L LTR MaLR 169 386 -229 476 213 77 13 chr2 235068494 235068623 -18187960 + MLT1L LTR MaLR 449 611 -4 2188 159 58 21 chr2 235068633 235068864 -18187719 - MSTB2 LTR MaLR -7 450 229 1722 180 3 30 chr2 235068864 235069169 -18187414 - AluJb SINE Alu -15 297 1 2188 159 58 21 chr2 235069169 235069371 -18187212 - MSTB2 LTR MaLR -228 229 1 2117 80 39 11 chr2 235069557 235069843 -18186740 + AluSx SINE Alu 17 310 -2 1592 164 41 0 chr2 235070080 235070348 -18186235 + AluJo SINE Alu 21 299 -13 655 210 0 25 chr2 235071128 235071247 -18185336 + AluJo/FLAM SINE Alu 2 117 -195 2136 89 0 3 chr2 235071247 235071529 -18185054 + AluY SINE Alu 1 281 -30 1184 151 5 5 chr2 235071561 235071753 -18184830 + AluSg/x SINE Alu 108 299 -11 565 299 154 5 chr2 235071855 235072069 -18184514 - MIR SINE MIR -16 246 1 335 218 4 257 chr2 235072105 235072366 -18184217 - MER91A DNA MER1_type 0 196 2 1250 294 51 34 chr2 235072436 235072942 -18183641 + LTR33 LTR ERVL 7 521 0 241 271 21 10 chr2 235072947 235073043 -18183540 - LTR67 LTR ERVL -33 524 428 189 0 0 0 chr2 235074199 235074220 -18182363 + (T)n Simple_repeat Simple_repeat 1 21 0 247 313 105 17 chr2 235074490 235074651 -18181932 + MIR SINE MIR 31 216 -46 1347 231 40 3 chr2 235074799 235075102 -18181481 + LTR40b LTR ERVL 1 314 -148 5194 105 144 118 chr2 235075104 235076652 -18179931 - pTR5 LTR ERV1 0 2438 743 726 146 22 65 chr2 235076652 235076811 -18179772 + LTR40a LTR ERVL 325 519 0 204 323 0 0 chr2 235076903 235076965 -18179618 + MIR SINE MIR 2 63 -199 1279 251 58 35 chr2 235076977 235077371 -18179212 - LTR16C LTR ERVL -2 489 87 544 244 44 6 chr2 235077456 235077616 -18178967 + MIR SINE MIR 97 262 0 2211 111 0 0 chr2 235078341 235078638 -18177945 - AluY SINE Alu -14 297 1 27 62 0 0 chr2 235078822 235078870 -18177713 + AT_rich Low_complexity Low_complexity 1 48 0 26 50 0 0 chr2 235079244 235079284 -18177299 + AT_rich Low_complexity Low_complexity 1 40 0 235 295 0 33 chr2 235080782 235080904 -18175679 + GA-rich Low_complexity Low_complexity 2 119 0 510 151 19 0 chr2 235081033 235081139 -18175444 - Charlie5 DNA MER1_type 0 2618 2511 1518 235 56 47 chr2 235081240 235081681 -18174902 - L2 LINE L2 -410 2904 2455 2213 94 10 29 chr2 235081681 235081989 -18174594 - AluSx SINE Alu -10 302 1 1518 235 56 47 chr2 235081989 235082138 -18174445 - L2 LINE L2 -859 2455 2309 414 226 20 0 chr2 235082139 235082241 -18174342 - L2 LINE L2 -2876 438 335 2099 100 4 0 chr2 235082285 235082554 -18174029 + AluSc SINE Alu 1 270 -39 2021 115 0 3 chr2 235082707 235082993 -18173590 + AluY SINE Alu 13 297 -14 280 230 9 106 chr2 235083331 235083377 -18173206 - MLT1L LTR MaLR -17 598 549 2228 129 6 23 chr2 235083377 235083719 -18172864 + MER1B DNA MER1_type 2 337 0 280 230 9 106 chr2 235083719 235083785 -18172798 - MLT1L LTR MaLR -66 549 497 226 366 50 0 chr2 235084172 235084273 -18172310 + L2 LINE L2 3208 3313 0 2414 72 0 0 chr2 235084384 235084676 -18171907 + AluY SINE Alu 1 292 -19 21 0 0 0 chr2 235084676 235084697 -18171886 + AT_rich Low_complexity Low_complexity 1 21 0 2199 109 0 0 chr2 235085973 235086266 -18170317 + AluSc SINE Alu 1 293 -16 1500 93 4 76 chr2 235086453 235086540 -18170043 - AluSx SINE Alu -92 220 128 2013 81 0 19 chr2 235086540 235086818 -18169765 - AluY SINE Alu 0 311 33 1500 93 4 76 chr2 235086818 235086967 -18169616 - AluSx SINE Alu -184 128 1 1530 244 53 20 chr2 235087294 235087998 -18168585 - L1MD2 LINE L1 0 6359 5539 27 0 0 0 chr2 235088003 235088030 -18168553 + AT_rich Low_complexity Low_complexity 1 27 0 1603 102 0 0 chr2 235088398 235088613 -18167970 - AluSg/x SINE Alu -8 302 88 422 242 141 10 chr2 235088709 235088921 -18167662 + MIR SINE MIR 16 248 -14 803 286 91 47 chr2 235089175 235090026 -18166557 - L2 LINE L2 0 3313 2435 2177 120 7 0 chr2 235090451 235090752 -18165831 + AluSx SINE Alu 1 303 -9 238 330 19 9 chr2 235090972 235091078 -18165505 + MIR SINE MIR 88 194 -68 532 265 0 18 chr2 235091163 235091333 -18165250 + MIR SINE MIR 83 249 -13 2234 87 0 48 chr2 235091342 235091652 -18164931 + AluY SINE Alu 1 295 -16 2161 102 0 14 chr2 235091748 235092043 -18164540 + AluSc SINE Alu 1 291 -18 454 306 114 46 chr2 235092151 235092458 -18164125 - MER102b DNA MER1_type -3 338 11 1026 168 49 10 chr2 235093253 235093456 -18163127 + MER20 DNA MER1_type 2 212 -7 1588 167 13 33 chr2 235094234 235094533 -18162050 - AluJb SINE Alu -17 295 3 2240 92 3 23 chr2 235094714 235095018 -18161565 - AluY SINE Alu -13 298 1 2092 128 0 44 chr2 235095018 235095338 -18161245 - AluSx SINE Alu -6 306 1 511 260 148 0 chr2 235095489 235095685 -18160898 - MIR SINE MIR -13 249 25 294 81 0 0 chr2 235095859 235095896 -18160687 + tRNA-Tyr-TAC tRNA tRNA 1 37 -39 1638 163 24 14 chr2 235096136 235096425 -18160158 + AluJo SINE Alu 1 292 -20 21 36 0 0 chr2 235096435 235096463 -18160120 + AT_rich Low_complexity Low_complexity 1 28 0 2270 189 22 22 chr2 235096538 235096989 -18159594 + MER66A LTR ERV1 28 478 0 2401 86 7 0 chr2 235098450 235098751 -18157832 - AluSq SINE Alu -10 303 1 2384 83 3 6 chr2 235099391 235099703 -18156880 - AluY SINE Alu 0 311 1 303 71 0 0 chr2 235099814 235099856 -18156727 + (CA)n Simple_repeat Simple_repeat 2 43 0 1451 188 14 18 chr2 235100330 235100607 -18155976 + AluJb SINE Alu 6 281 -31 24 32 0 0 chr2 235100610 235100641 -18155942 + AT_rich Low_complexity Low_complexity 1 31 0 2270 104 0 3 chr2 235100837 235101119 -18155464 + AluSq SINE Alu 6 288 -25 189 0 0 0 chr2 235101119 235101140 -18155443 + (GA)n Simple_repeat Simple_repeat 2 22 0 2270 104 0 3 chr2 235101140 235101154 -18155429 + AluSq SINE Alu 288 301 -12 242 122 122 0 chr2 235101530 235101571 -18155012 + AluJb SINE Alu 1 46 -254 6474 152 112 89 chr2 235101581 235102350 -18154233 + pTR5 LTR ERV1 769 1519 -919 2162 100 0 17 chr2 235102350 235102650 -18153933 - AluY SINE Alu -16 295 1 6474 152 112 89 chr2 235102650 235103512 -18153071 + pTR5 LTR ERV1 1519 2438 0 1603 171 0 0 chr2 235103515 235103766 -18152817 + AluJb SINE Alu 31 281 -31 22 0 0 0 chr2 235103767 235103789 -18152794 + GC_rich Low_complexity Low_complexity 1 22 0 1252 219 35 3 chr2 235103791 235104068 -18152515 + LTR45B LTR ERV1 185 584 -19 366 231 13 0 chr2 235104165 235104243 -18152340 - MER58 DNA MER1_type -6 2414 131 207 0 0 0 chr2 235104244 235104267 -18152316 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1459 141 53 56 chr2 235104280 235104599 -18151984 + L1MB5 LINE L1 5841 6158 -16 2314 56 0 11 chr2 235104615 235104924 -18151659 - AluY SINE Alu 0 306 1 269 309 12 12 chr2 235104995 235105079 -18151504 - MER58 DNA MER1_type -131 84 1 200 196 22 0 chr2 235105221 235105267 -18151316 - L2 LINE L2 -68 3245 3199 420 162 0 162 chr2 235105410 235105546 -18151037 + L1MB5 LINE L1 6052 6165 -9 1547 131 49 101 chr2 235105585 235105747 -18150836 - L1MB8 LINE L1 -4 6174 6005 1530 173 112 35 chr2 235105747 235106094 -18150489 + MLT1A2 LTR MaLR 1 374 0 1547 131 49 101 chr2 235106094 235106220 -18150363 - L1MB8 LINE L1 -173 6005 5906 2264 107 37 50 chr2 235106220 235106602 -18149981 + MER51B LTR ERV1 1 377 0 1547 131 49 101 chr2 235106602 235106678 -18149905 - L1MB8 LINE L1 -272 5906 5828 2363 101 3 0 chr2 235106692 235106999 -18149584 - AluY SINE Alu -3 308 1 1474 191 17 38 chr2 235107012 235107305 -18149278 - AluJo SINE Alu -21 291 5 2656 87 3 33 chr2 235107469 235107597 -18148986 - THE1A LTR MaLR 0 355 225 2187 122 0 0 chr2 235107597 235107893 -18148690 - AluSc SINE Alu -13 296 1 2656 87 3 33 chr2 235107893 235108130 -18148453 - THE1A LTR MaLR -130 225 1 8567 124 22 31 chr2 235108130 235108703 -18147880 - THE1A-int LTR MaLR 0 1651 1074 674 217 0 0 chr2 235108703 235108832 -18147751 + FLAM_C SINE Alu 5 133 0 8567 124 22 31 chr2 235108832 235109971 -18146612 - THE1A-int LTR MaLR -577 1074 1 2817 60 9 3 chr2 235109971 235110321 -18146262 - THE1A LTR MaLR 0 355 4 632 228 22 0 chr2 235110394 235110530 -18146053 - MER115 DNA AcHobo -2 691 553 1740 142 3 55 chr2 235110565 235110876 -18145707 - AluJo SINE Alu -17 295 1 1196 106 0 12 chr2 235111185 235111346 -18145237 - AluSg SINE Alu -151 159 1 789 311 33 7 chr2 235111346 235111652 -18144931 - L2 LINE L2 -2999 315 2 347 76 212 0 chr2 235111801 235111867 -18144716 - MADE1 DNA Mariner 0 80 1 2146 112 0 7 chr2 235112113 235112407 -18144176 - AluY SINE Alu -19 292 1 2075 136 0 22 chr2 235112513 235112830 -18143753 - AluSx SINE Alu -2 310 1 2239 121 0 0 chr2 235113230 235113535 -18143048 + AluSx SINE Alu 1 305 -7 2485 62 3 0 chr2 235113541 235113832 -18142751 + AluY SINE Alu 1 292 -19 677 104 0 19 chr2 235113932 235114012 -18142571 + AluSg/x SINE Alu 203 283 -27 180 0 0 0 chr2 235114012 235114032 -18142551 + (TAA)n Simple_repeat Simple_repeat 2 21 0 677 104 0 19 chr2 235114032 235114050 -18142533 + AluSg/x SINE Alu 283 301 -9 2037 182 0 5 chr2 235114050 235114419 -18142164 - L1MB2 LINE L1 -10 6161 5795 274 236 41 98 chr2 235114669 235114792 -18141791 - MLT1E LTR MaLR -458 135 20 933 132 0 7 chr2 235114864 235115000 -18141583 - AluJo SINE Alu -177 135 1 1727 207 0 0 chr2 235115090 235115394 -18141189 + AluJo SINE Alu 1 304 -8 221 356 34 75 chr2 235115658 235115897 -18140686 - L2 LINE L2 -51 3221 2993 362 127 0 18 chr2 235115904 235115959 -18140624 - THE1C LTR MaLR 0 375 322 2367 110 0 0 chr2 235116067 235116377 -18140206 - AluSg SINE Alu 0 310 1 486 239 76 33 chr2 235116759 235117003 -18139580 + L1M3 LINE L1 5558 5817 -317 2016 124 107 12 chr2 235117032 235117378 -18139205 + MSTA LTR MaLR 1 379 -49 1426 113 5 0 chr2 235117378 235117573 -18139010 + AluSp SINE Alu 102 297 -16 1714 105 0 4 chr2 235117703 235117932 -18138651 + AluSg/x SINE Alu 85 312 0 297 0 0 0 chr2 235118998 235119031 -18137552 + (TG)n Simple_repeat Simple_repeat 2 34 0 1830 130 0 70 chr2 235119035 235119335 -18137248 - AluSx SINE Alu -31 281 3 228 325 33 17 chr2 235119405 235119525 -18137058 + L2 LINE L2 3136 3257 -15 1876 173 0 3 chr2 235119530 235119831 -18136752 + AluJo SINE Alu 1 300 -12 398 77 0 0 chr2 235119939 235119991 -18136592 + Alu SINE Alu 1 52 -251 440 358 6 12 chr2 235120094 235120267 -18136316 - MER115 DNA AcHobo -521 172 1 378 226 157 63 chr2 235120485 235120715 -18135868 - AluJo SINE Alu -78 224 1 * 1056 290 77 82 chr2 235120699 235121286 -18135297 - MLT1K LTR MaLR 0 588 5 2179 126 0 0 chr2 235121493 235121794 -18134789 + AluSg SINE Alu 1 301 -9 1670 175 97 107 chr2 235122019 235122544 -18134039 - MLT2B1 LTR ERVL 0 520 1 1944 136 39 0 chr2 235122880 235123166 -18133417 - AluSx SINE Alu -14 298 2 1845 146 100 0 chr2 235123638 235123968 -18132615 + MLT1C LTR MaLR 102 464 -3 364 251 104 16 chr2 235123968 235124092 -18132491 - MIR SINE MIR -62 146 13 327 286 14 68 chr2 235124097 235124168 -18132415 + MER5A DNA MER1_type 6 66 -123 2206 135 0 0 chr2 235124168 235124479 -18132104 + AluSx SINE Alu 1 311 -1 327 286 14 68 chr2 235124479 235124554 -18132029 + MER5A DNA MER1_type 66 144 -45 461 155 37 15 chr2 235125199 235125470 -18131113 + (TA)n Simple_repeat Simple_repeat 1 277 0 27 49 0 0 chr2 235125470 235125511 -18131072 + AT_rich Low_complexity Low_complexity 1 41 0 290 243 6 0 chr2 235125511 235125688 -18130895 + (TA)n Simple_repeat Simple_repeat 1 178 0 1065 249 91 48 chr2 235125946 235126472 -18130111 - MLT1H LTR MaLR 0 549 1 849 231 12 6 chr2 235126773 235126946 -18129637 + MER5A DNA MER1_type 16 189 0 2499 88 0 0 chr2 235127517 235127825 -18128758 - AluSx SINE Alu -4 308 1 922 259 79 62 chr2 235128245 235128713 -18127870 + MLT1H LTR MaLR 74 549 0 21 0 0 0 chr2 235128714 235128735 -18127848 + AT_rich Low_complexity Low_complexity 1 21 0 1173 87 0 7 chr2 235128741 235128890 -18127693 + AluSq/x SINE Alu 1 148 -164 195 204 82 20 chr2 235129048 235129097 -18127486 - L2 LINE L2 -15 3257 3206 584 63 0 0 chr2 235129302 235129381 -18127202 + L1PB1 LINE L1 5711 5789 -362 242 56 28 0 chr2 235129382 235129418 -18127165 + (TA)n Simple_repeat Simple_repeat 2 38 0 2588 90 8 3 chr2 235129423 235129788 -18126795 + L1PB1 LINE L1 5784 6150 -1 471 299 46 5 chr2 235130477 235130674 -18125909 + HERV16 LTR ERVL 2210 2414 -2582 2248 167 47 74 chr2 235130917 235131158 -18125425 + MLT1D LTR MaLR 3 249 -256 495 33 0 0 chr2 235131158 235131219 -18125364 + (TG)n Simple_repeat Simple_repeat 1 61 0 2248 167 47 74 chr2 235131219 235131491 -18125092 + MLT1D LTR MaLR 249 502 -3 645 223 17 29 chr2 235131524 235131699 -18124884 - MLT1L LTR MaLR -100 515 343 214 284 0 15 chr2 235132689 235132756 -18123827 + MIR SINE MIR 18 83 -125 858 76 0 0 chr2 235132834 235132953 -18123630 + (CTA)n Simple_repeat Simple_repeat 1 119 0 2389 98 0 0 chr2 235132953 235133260 -18123323 - AluY SINE Alu -2 309 3 428 332 109 23 chr2 235133263 235133483 -18123100 - MIR SINE MIR -4 258 20 586 220 16 55 chr2 235133541 235133723 -18122860 - MER5B DNA MER1_type -1 177 3 2379 72 3 44 chr2 235134009 235134330 -18122253 + AluY SINE Alu 1 308 -3 1480 133 4 0 chr2 235135341 235135581 -18121002 - L1PB1 LINE L1 -83 6068 5828 1911 104 60 83 chr2 235136622 235137006 -18119577 + THE1C LTR MaLR 1 375 0 241 326 184 14 chr2 235137133 235137280 -18119303 + MIR3 SINE MIR 36 207 -1 2031 132 26 0 chr2 235137317 235137621 -18118962 + AluSx SINE Alu 1 312 0 2122 124 30 24 chr2 235138012 235138343 -18118240 + MER1B DNA MER1_type 1 333 -4 703 288 95 3 chr2 235138353 235138638 -18117945 + MER102b DNA MER1_type 26 336 -5 2562 71 0 0 chr2 235138815 235139126 -18117457 - AluY SINE Alu 0 311 1 288 187 74 94 chr2 235139824 235139987 -18116596 - MER5A DNA MER1_type 0 178 26 2201 132 3 0 chr2 235141576 235141887 -18114696 - AluSx SINE Alu 0 312 1 512 322 29 6 chr2 235141995 235142166 -18114417 - MIR SINE MIR -70 192 18 1111 181 0 0 chr2 235143159 235143352 -18113231 - AluSg/x SINE Alu 0 309 117 344 290 65 0 chr2 235143903 235143996 -18112587 + MIR SINE MIR 2 100 -162 358 79 10 208 chr2 235143999 235144042 -18112541 + MLT1A2 LTR MaLR 1 15 -351 2073 103 20 27 chr2 235144042 235144334 -18112249 - AluSq SINE Alu -23 290 1 358 79 10 208 chr2 235144334 235144391 -18112192 + MLT1A2 LTR MaLR 15 82 -284 1451 227 60 8 chr2 235144402 235144575 -18112008 - MSTD LTR MaLR -5 391 228 252 0 0 0 chr2 235144575 235144603 -18111980 + (GA)n Simple_repeat Simple_repeat 1 28 0 1451 227 60 8 chr2 235144603 235144799 -18111784 - MSTD LTR MaLR -168 228 3 1488 154 39 28 chr2 235144800 235145086 -18111497 + MLT1A1 LTR MaLR 77 365 0 282 200 0 14 chr2 235146254 235146307 -18110276 - L1ME3 LINE L1 0 6162 6110 1967 191 56 54 chr2 235146307 235146638 -18109945 + MLT1D LTR MaLR 1 330 -175 2136 113 20 7 chr2 235146638 235146940 -18109643 - AluSx SINE Alu -6 306 1 1453 198 0 8 chr2 235146944 235147212 -18109371 - AluJb SINE Alu -10 302 37 1967 191 56 54 chr2 235147212 235147379 -18109204 + MLT1D LTR MaLR 332 505 0 282 200 0 14 chr2 235147379 235147395 -18109188 - L1ME3 LINE L1 -52 6110 6094 1461 207 25 12 chr2 235147395 235147718 -18108865 + MSTB LTR MaLR 85 411 -15 1621 210 107 0 chr2 235147731 235148178 -18108405 - L1ME3 LINE L1 -110 6052 5558 2354 105 0 0 chr2 235148666 235148971 -18107612 + AluSx SINE Alu 1 305 -7 725 236 0 0 chr2 235149130 235149274 -18107309 - MER82 DNA MER2_type 0 653 510 257 128 0 0 chr2 235149402 235149449 -18107134 - Alu SINE Alu 0 300 254 2206 128 0 0 chr2 235149481 235149786 -18106797 + AluSx SINE Alu 1 305 -7 756 152 30 24 chr2 235149794 235149959 -18106624 - L1MA8 LINE L1 -10 6281 6116 2072 204 18 9 chr2 235149959 235150414 -18106169 - MER82 DNA MER2_type -194 459 1 361 257 37 0 chr2 235150655 235150764 -18105819 - MIR3 SINE MIR -1 207 95 1695 148 76 4 chr2 235150876 235151153 -18105430 + AluJb SINE Alu 1 297 -15 399 119 0 0 chr2 235151153 235151220 -18105363 + (TA)n Simple_repeat Simple_repeat 1 67 0 22 0 0 0 chr2 235151592 235151614 -18104969 + AT_rich Low_complexity Low_complexity 1 22 0 1844 147 3 34 chr2 235151640 235151960 -18104623 - AluSx SINE Alu -2 310 1 641 65 41 16 chr2 235151968 235152091 -18104492 + (TA)n Simple_repeat Simple_repeat 1 126 0 189 0 0 0 chr2 235152118 235152139 -18104444 + (TG)n Simple_repeat Simple_repeat 2 22 0 216 0 0 0 chr2 235152142 235152166 -18104417 + (T)n Simple_repeat Simple_repeat 1 24 0 231 255 143 0 chr2 235152341 235152439 -18104144 - L1ME4a LINE L1 -8 6113 6002 1341 184 4 4 chr2 235152781 235153042 -18103541 - AluJb SINE Alu -51 261 1 359 238 60 0 chr2 235153053 235153137 -18103446 - L1MC4 LINE L1 -1339 6703 6615 189 0 0 0 chr2 235153200 235153221 -18103362 + (TG)n Simple_repeat Simple_repeat 2 22 0 207 0 0 0 chr2 235153224 235153247 -18103336 + (T)n Simple_repeat Simple_repeat 1 23 0 270 235 143 0 chr2 235153424 235153522 -18103061 - L1ME4a LINE L1 -8 6113 6002 310 254 0 85 chr2 235153733 235153863 -18102720 - L1ME4a LINE L1 -393 5728 5610 2368 75 7 0 chr2 235154348 235154640 -18101943 + AluY SINE Alu 3 296 -15 1986 149 16 10 chr2 235154683 235154991 -18101592 + AluSx SINE Alu 1 310 -2 315 0 0 0 chr2 235155037 235155072 -18101511 + (TG)n Simple_repeat Simple_repeat 2 36 0 202 263 100 12 chr2 235155247 235155327 -18101256 - MIR SINE MIR -64 144 58 416 133 0 13 chr2 235156002 235156077 -18100506 + (TTCC)n Simple_repeat Simple_repeat 1 74 0 841 139 0 0 chr2 235156077 235156199 -18100384 - FLAM_C SINE Alu -11 122 1 2098 103 0 4 chr2 235157121 235157402 -18099181 - AluSx SINE Alu 0 312 33 2078 117 17 0 chr2 235158405 235158704 -18097879 + AluSq SINE Alu 1 304 -9 655 288 86 41 chr2 235158710 235159002 -18097581 - L2 LINE L2 0 3313 3009 23 0 0 0 chr2 235159406 235159429 -18097154 + AT_rich Low_complexity Low_complexity 1 23 0 234 305 48 48 chr2 235159432 235159537 -18097046 + MIR SINE MIR 8 112 -150 203 266 127 13 chr2 235160817 235160896 -18095687 + MIR3 SINE MIR 92 179 -29 249 33 0 0 chr2 235160898 235160928 -18095655 + (TTCC)n Simple_repeat Simple_repeat 1 30 0 2170 95 7 3 chr2 235160928 235161211 -18095372 - AluSc SINE Alu -25 284 1 397 215 13 0 chr2 235161409 235161488 -18095095 - MIR SINE MIR -74 188 109 469 309 109 11 chr2 235161506 235161681 -18094902 - MIR3 SINE MIR -3 205 14 1366 174 64 60 chr2 235161848 235162025 -18094558 - AluJo SINE Alu -13 299 119 318 26 0 0 chr2 235162025 235162064 -18094519 + (TTTTC)n Simple_repeat Simple_repeat 3 41 0 1366 174 64 60 chr2 235162064 235162184 -18094399 - AluJo SINE Alu -193 119 1 983 183 27 54 chr2 235162474 235162698 -18093885 + MER20 DNA MER1_type 1 218 -1 2088 113 0 0 chr2 235162965 235163239 -18093344 - AluSc SINE Alu -3 306 33 424 349 123 8 chr2 235163569 235163804 -18092779 - MIR SINE MIR 0 262 1 202 211 0 0 chr2 235165423 235165461 -18091122 + (TG)n Simple_repeat Simple_repeat 1 38 0 249 410 8 0 chr2 235165721 235165843 -18090740 - L3 LINE CR1 -29 1548 1426 392 261 183 7 chr2 235165875 235166017 -18090566 - MIR SINE MIR -95 167 1 747 105 7 79 chr2 235166067 235166121 -18090462 - L1MA4 LINE L1 -1 6299 6243 2476 47 0 3 chr2 235166121 235166419 -18090164 - AluY SINE Alu -14 297 1 747 105 7 79 chr2 235166419 235166516 -18090067 - L1MA4 LINE L1 -57 6243 6159 448 350 106 19 chr2 235166526 235166837 -18089746 - L3 LINE CR1 -195 1382 1045 1298 153 0 33 chr2 235167075 235167290 -18089293 + AluJb SINE Alu 5 212 -100 831 103 0 0 chr2 235167390 235167497 -18089086 - AluSq/x SINE Alu -205 107 1 221 244 0 0 chr2 235167504 235167549 -18089034 + (CATA)n Simple_repeat Simple_repeat 3 47 0 406 256 8 41 chr2 235168793 235168870 -18087713 - Charlie8 DNA MER1_type -2194 223 150 402 268 39 116 chr2 235168870 235169352 -18087231 - MER65A LTR ERV1 0 445 1 406 256 8 41 chr2 235169352 235169395 -18087188 - Charlie8 DNA MER1_type -2267 150 107 2455 151 48 0 chr2 235169425 235169691 -18086892 - L1MA4 LINE L1 -5 6295 6030 667 218 109 7 chr2 235169691 235169991 -18086592 - L1PA15 LINE L1 -151 6014 5664 2384 88 3 0 chr2 235169995 235170302 -18086281 - AluY SINE Alu -3 308 1 1115 90 0 0 chr2 235170305 235170438 -18086145 - AluSq/x SINE Alu -179 133 1 9700 164 48 24 chr2 235170439 235172211 -18084372 - L1PA15 LINE L1 -686 5614 3772 2041 176 61 17 chr2 235172211 235172621 -18083962 + MSTA LTR MaLR 1 428 0 9700 164 48 24 chr2 235172621 235173190 -18083393 - L1PA15 LINE L1 -2528 3772 3218 1625 274 106 67 chr2 235173844 235174405 -18082178 + HAL1 LINE L1 3 541 -1966 2253 80 17 0 chr2 235174405 235174693 -18081890 - AluY SINE Alu -18 293 1 1625 274 106 67 chr2 235174693 235175181 -18081402 + HAL1 LINE L1 541 1093 -1414 304 140 0 0 chr2 235175264 235175314 -18081269 - MADE1 DNA Mariner -30 50 1 609 234 85 0 chr2 235175444 235175585 -18080998 + MLT1J2 LTR MaLR 23 175 -275 213 159 0 0 chr2 235175920 235175964 -18080619 + GA-rich Low_complexity Low_complexity 1 44 0 210 250 34 68 chr2 235176022 235176110 -18080473 - L2 LINE L2 -8 3305 3221 224 250 18 18 chr2 235176242 235176298 -18080285 - L2 LINE L2 -497 2817 2762 21 36 0 0 chr2 235176403 235176431 -18080152 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 235176577 235176605 -18079978 + AT_rich Low_complexity Low_complexity 1 28 0 243 88 0 0 chr2 235177603 235177637 -18078946 + (T)n Simple_repeat Simple_repeat 1 34 0 2337 92 0 0 chr2 235177838 235178132 -18078451 - AluY SINE Alu -17 294 1 2287 92 0 0 chr2 235178458 235178740 -18077843 + AluSx SINE Alu 17 298 -14 4600 175 58 14 chr2 235178947 235179753 -18076830 - MER21B LTR ERV1 -21 842 1 239 156 22 0 chr2 235179807 235179852 -18076731 - MLT2B1 LTR ERVL -2 412 367 201 147 0 0 chr2 235179852 235179886 -18076697 + (TG)n Simple_repeat Simple_repeat 2 35 0 282 235 0 0 chr2 235179916 235179997 -18076586 + (TA)n Simple_repeat Simple_repeat 2 82 0 342 98 0 0 chr2 235180024 235180075 -18076508 + (CA)n Simple_repeat Simple_repeat 2 52 0 488 163 219 24 chr2 235180082 235180205 -18076378 - THE1B LTR MaLR -217 147 1 431 181 0 0 chr2 235180208 235180280 -18076303 + MLT2B1 LTR ERVL 409 480 -40 246 32 0 0 chr2 235180283 235180314 -18076269 + (TG)n Simple_repeat Simple_repeat 2 32 0 1672 154 108 25 chr2 235180347 235180672 -18075911 + MSTA LTR MaLR 77 428 0 10301 128 14 45 chr2 235180674 235181258 -18075325 + MSTA-int LTR MaLR 3 604 -976 2521 60 0 3 chr2 235181258 235181556 -18075027 - AluY SINE Alu -13 298 2 10301 128 14 45 chr2 235181556 235182600 -18073983 + MSTA-int LTR MaLR 604 1580 0 1792 152 179 8 chr2 235182603 235182966 -18073617 + MSTA LTR MaLR 4 428 0 1296 181 35 83 chr2 235183003 235183046 -18073537 - MLT2B1 LTR ERVL -221 299 255 4786 150 45 4 chr2 235183046 235183798 -18072785 - LTR39 LTR ERV1 0 783 1 1296 181 35 83 chr2 235183798 235184068 -18072515 - MLT2B1 LTR ERVL -265 255 1 2157 136 0 0 chr2 235184068 235184363 -18072220 + AluSx SINE Alu 1 295 -17 1068 191 64 0 chr2 235184485 235184705 -18071878 - L1MB7 LINE L1 -87 6097 5864 1407 214 30 17 chr2 235184881 235185057 -18071526 - AluJo SINE Alu -13 299 116 198 0 0 0 chr2 235185057 235185079 -18071504 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 1407 214 30 17 chr2 235185079 235185197 -18071386 - AluJo SINE Alu -196 116 1 995 139 6 29 chr2 235186398 235186571 -18070012 - AluY SINE Alu -7 304 136 3902 172 29 27 chr2 235186901 235187273 -18069310 - L1MB2 LINE L1 -2 6169 5799 225 65 0 0 chr2 235187273 235187304 -18069279 + (CA)n Simple_repeat Simple_repeat 1 31 0 3902 172 29 27 chr2 235187304 235187529 -18069054 - L1MB2 LINE L1 -372 5799 5568 3497 109 26 24 chr2 235187529 235187668 -18068915 + LOR1a LTR ERV1 1 138 -359 2338 100 0 7 chr2 235187668 235187978 -18068605 + AluY SINE Alu 1 308 -3 3497 109 26 24 chr2 235187978 235188334 -18068249 + LOR1a LTR ERV1 138 497 0 3902 172 29 27 chr2 235188334 235188468 -18068115 - L1MB2 LINE L1 -603 5568 5436 1785 181 0 3 chr2 235188688 235188975 -18067608 - AluJo SINE Alu -26 286 1 2136 112 14 0 chr2 235188987 235189283 -18067300 - AluSx SINE Alu -11 301 2 265 183 33 0 chr2 235189324 235189384 -18067199 + L1MC4 LINE L1 6641 6702 -1340 1010 328 106 11 chr2 235189484 235190247 -18066336 + L2 LINE L2 2467 3313 0 6571 31 1 1 chr2 235190416 235191180 -18065403 - L1PA4 LINE L1 -12 6143 5380 249 211 18 0 chr2 235191355 235191412 -18065171 + MIR3 SINE MIR 151 208 0 412 241 65 19 chr2 235191978 235192086 -18064497 + MER5A DNA MER1_type 1 113 -76 230 286 79 0 chr2 235192121 235192184 -18064399 + MLT1K LTR MaLR 189 256 -332 585 245 55 3 chr2 235192191 235192334 -18064249 - MER5A DNA MER1_type -25 164 1 239 309 0 0 chr2 235192613 235192681 -18063902 - MLT1I LTR MaLR -260 149 82 713 282 95 48 chr2 235192746 235192771 -18063812 + MLT1K LTR MaLR 277 299 -289 2315 113 0 0 chr2 235192771 235193073 -18063510 - AluSq SINE Alu -11 302 1 713 282 95 48 chr2 235193073 235193299 -18063284 + MLT1K LTR MaLR 299 540 -48 860 269 83 65 chr2 235193926 235194384 -18062199 - MLT1J LTR MaLR -45 466 1 445 280 61 33 chr2 235195136 235195351 -18061232 + MIR SINE MIR 23 247 -15 2277 103 3 16 chr2 235195844 235196156 -18060427 - AluSx SINE Alu -2 310 3 22 35 0 0 chr2 235196404 235196433 -18060150 + AT_rich Low_complexity Low_complexity 1 29 0 2480 150 49 36 chr2 235196699 235197145 -18059438 + LTR47A LTR ERVL 1 452 0 2186 82 11 7 chr2 235197475 235197812 -18058771 - AluSc SINE Alu 0 338 1 559 313 32 52 chr2 235197936 235198021 -18058562 - MIR SINE MIR -16 246 161 2724 151 45 19 chr2 235198021 235198505 -18058078 - LOR1a LTR ERV1 0 497 1 559 313 32 52 chr2 235198505 235198668 -18057915 - MIR SINE MIR -101 161 3 247 181 110 110 chr2 235198781 235198908 -18057675 - L2 LINE L2 0 3313 3187 5464 72 41 1 chr2 235199379 235200041 -18056542 - LTR12 LTR ERV1 0 688 1 219 36 0 0 chr2 235201394 235201422 -18055161 + (CCA)n Simple_repeat Simple_repeat 2 29 0 2135 102 0 3 chr2 235201483 235201818 -18054765 + AluY SINE Alu 1 334 0 2548 70 0 10 chr2 235201867 235202181 -18054402 + AluY SINE Alu 1 311 0 308 284 23 0 chr2 235202191 235202279 -18054304 + L1MC4 LINE L1 6614 6703 -1339 2409 89 23 0 chr2 235202337 235202639 -18053944 + AluSx SINE Alu 1 309 -3 387 55 0 82 chr2 235203148 235203221 -18053362 - L1MA4A LINE L1 -1 6302 6236 2373 132 30 30 chr2 235203221 235203585 -18052998 + THE1B LTR MaLR 1 364 0 7119 92 3 0 chr2 235203585 235204504 -18052079 + THE1B-int LTR MaLR 1 922 -658 3253 206 36 25 chr2 235204501 235205187 -18051396 - L1M2 LINE L1 -6154 695 2 * 225 225 175 0 chr2 235205653 235205733 -18050850 - MIR SINE MIR -86 176 83 245 271 0 0 chr2 235206957 235207005 -18049578 - LTR16A LTR ERVL -15 435 388 2466 61 0 0 chr2 235207377 235207673 -18048910 - AluY SINE Alu -13 298 3 225 119 0 0 chr2 235207677 235207719 -18048864 + (T)n Simple_repeat Simple_repeat 1 42 0 200 291 135 34 chr2 235208757 235208905 -18047678 - MER5A DNA MER1_type 0 189 27 564 308 46 71 chr2 235208968 235209293 -18047290 - MER102b DNA MER1_type -15 326 10 2384 72 3 0 chr2 235209915 235210207 -18046376 + AluSg SINE Alu 1 293 -17 723 275 22 6 chr2 235210775 235210953 -18045630 - MLT1I LTR MaLR -203 206 26 2220 120 0 0 chr2 235213292 235213583 -18043000 - AluSx SINE Alu -21 291 1 1295 248 28 3 chr2 235213651 235213969 -18042614 + MER87 LTR ERV1 216 541 0 2066 119 7 13 chr2 235214033 235214335 -18042248 - AluSq SINE Alu -13 300 1 238 179 26 166 chr2 235216972 235217048 -18039535 + MER113 DNA MER1_type? 7 53 -468 1658 162 23 55 chr2 235217048 235217357 -18039226 - AluJo SINE Alu -3 309 11 238 179 26 166 chr2 235217357 235217431 -18039152 + MER113 DNA MER1_type? 53 136 -385 391 291 84 28 chr2 235217827 235218006 -18038577 + LTR33 LTR ERVL 2 190 -331 678 247 60 17 chr2 235218006 235218025 -18038558 + MER96B DNA MER1_type? 173 190 -227 2277 118 0 10 chr2 235218025 235218338 -18038245 - AluSx SINE Alu 0 312 3 678 247 60 17 chr2 235218338 235218553 -18038030 + MER96B DNA MER1_type? 190 417 0 488 272 64 15 chr2 235218651 235218853 -18037730 + LTR33 LTR ERVL 301 512 -9 2422 64 6 16 chr2 235219736 235220048 -18036535 - AluSc SINE Alu 0 309 1 555 288 71 50 chr2 235220312 235220552 -18036031 + L2 LINE L2 3027 3271 -1 227 318 57 0 chr2 235220592 235220680 -18035903 - MIR3 SINE MIR -32 176 84 28 29 0 0 chr2 235221571 235221606 -18034977 + AT_rich Low_complexity Low_complexity 1 35 0 1897 153 3 0 chr2 235221606 235221893 -18034690 - AluSx SINE Alu -24 288 1 228 333 71 0 chr2 235222397 235222496 -18034087 - MIR SINE MIR -90 172 67 271 325 129 69 chr2 235222813 235223232 -18033351 + L2 LINE L2 2827 3270 -2 210 37 0 0 chr2 235223322 235223349 -18033234 + (TAATG)n Simple_repeat Simple_repeat 4 30 0 2151 164 38 35 chr2 235223357 235223906 -18032677 + MLT2A2 LTR ERVL 1 553 -1 1962 137 7 0 chr2 235225337 235225614 -18030969 - AluSx SINE Alu -13 299 21 21 36 0 0 chr2 235225730 235225758 -18030825 + AT_rich Low_complexity Low_complexity 1 28 0 387 311 93 31 chr2 235225970 235226131 -18030452 + L2 LINE L2 3102 3272 0 2230 89 3 7 chr2 235226738 235227031 -18029552 + AluSc SINE Alu 1 292 -17 230 250 0 0 chr2 235227180 235227232 -18029351 + (ATG)n Simple_repeat Simple_repeat 3 54 0 2444 80 0 0 chr2 235229392 235229692 -18026891 - AluY SINE Alu -11 300 1 423 132 0 13 chr2 235230066 235230142 -18026441 - MER116 DNA Mariner 0 80 6 2335 76 10 0 chr2 235231606 235231897 -18024686 - AluY SINE Alu -17 294 1 1992 85 7 43 chr2 235232033 235232314 -18024269 + AluSg SINE Alu 1 271 -39 241 361 100 8 chr2 235234298 235234428 -18022155 + L2 LINE L2 3126 3267 -5 211 308 65 19 chr2 235235593 235235700 -18020883 + MIR SINE MIR 125 236 -26 885 160 28 0 chr2 235235712 235235856 -18020727 + FRAM SINE Alu 1 146 -30 2497 64 0 0 chr2 235235901 235236197 -18020386 - AluSq SINE Alu -17 296 1 441 353 54 18 chr2 235236366 235236587 -18019996 + MIR SINE MIR 13 241 -21 23 0 0 0 chr2 235236683 235236706 -18019877 + AT_rich Low_complexity Low_complexity 1 23 0 31 58 0 0 chr2 235236725 235236777 -18019806 + AT_rich Low_complexity Low_complexity 1 52 0 2213 92 0 39 chr2 235237585 235237890 -18018693 - AluSg1 SINE Alu -16 293 1 2209 113 3 0 chr2 235238398 235238699 -18017884 - AluSx SINE Alu -10 302 1 22 0 0 0 chr2 235238898 235238920 -18017663 + AT_rich Low_complexity Low_complexity 1 22 0 877 275 65 71 chr2 235241436 235241898 -18014685 + MLT1K LTR MaLR 42 500 -88 243 0 0 0 chr2 235242164 235242191 -18014392 + (TTA)n Simple_repeat Simple_repeat 2 28 0 860 198 0 36 chr2 235242194 235242361 -18014222 - AluJo SINE Alu -30 282 122 477 302 170 31 chr2 235244133 235244557 -18012026 - L2 LINE L2 -1 3312 2830 1924 161 3 10 chr2 235244752 235245051 -18011532 - AluJb SINE Alu -15 297 1 2584 214 25 31 chr2 235245121 235245832 -18010751 - L1ME1 LINE L1 -4 6162 5456 315 177 48 0 chr2 235245843 235245905 -18010678 + L1M LINE L1 5341 5405 -761 4327 124 46 49 chr2 235246827 235247608 -18008975 - MER4E LTR ERV1 0 779 1 297 0 0 0 chr2 235250117 235250150 -18006433 + (TG)n Simple_repeat Simple_repeat 2 34 0 22 0 0 0 chr2 235252701 235252723 -18003860 + AT_rich Low_complexity Low_complexity 1 22 0 1598 172 11 25 chr2 235252740 235253025 -18003558 - AluJo SINE Alu -31 281 1 470 311 55 6 chr2 235253037 235253220 -18003363 - MIR SINE MIR -18 244 53 4585 139 50 68 chr2 235255059 235255952 -18000631 + L1MA9 LINE L1 5042 5949 -363 648 208 0 34 chr2 235255952 235256101 -18000482 + L1PB4 LINE L1 6013 6156 0 4585 139 50 68 chr2 235256101 235256301 -18000282 + L1MA9 LINE L1 5949 6151 -161 15106 27 1 0 chr2 235256301 235258859 -17997724 - L1PA4 LINE L1 -3 6152 3594 4585 139 50 68 chr2 235258859 235259012 -17997571 + L1MA9 LINE L1 6151 6276 -36 2081 137 0 0 chr2 235259012 235259305 -17997278 - AluSx SINE Alu -15 297 5 4585 139 50 68 chr2 235259305 235259337 -17997246 + L1MA9 LINE L1 6276 6307 -5 322 278 22 0 chr2 235259371 235259461 -17997122 - MIR SINE MIR -25 237 146 2198 133 0 0 chr2 235260335 235260635 -17995948 - AluSx SINE Alu -12 300 1 1792 160 46 27 chr2 235260820 235261188 -17995395 + THE1C LTR MaLR 1 375 0 21 57 0 0 chr2 235261394 235261429 -17995154 + AT_rich Low_complexity Low_complexity 1 35 0 2004 131 10 3 chr2 235261567 235261857 -17994726 + AluSx SINE Alu 1 292 -20 23 0 0 0 chr2 235261937 235261960 -17994623 + AT_rich Low_complexity Low_complexity 1 23 0 205 89 44 0 chr2 235262016 235262061 -17994522 + (TA)n Simple_repeat Simple_repeat 1 47 0 187 197 40 53 chr2 235263563 235263639 -17992944 + L2 LINE L2 2698 2772 -542 312 237 40 0 chr2 235263974 235264050 -17992533 + Tigger3(Golem) DNA MER2_type 3 81 -2948 682 164 0 16 chr2 235264056 235264178 -17992405 + Tigger3(Golem) DNA MER2_type 2910 3029 0 2432 57 3 3 chr2 235264212 235264511 -17992072 - AluY SINE Alu -12 299 1 236 248 48 40 chr2 235264529 235264654 -17991929 + LTR67 LTR ERVL 432 557 0 403 197 25 12 chr2 235264716 235264839 -17991744 - MER5A DNA MER1_type 0 189 17 470 224 10 0 chr2 235264887 235264985 -17991598 + MER81 DNA DNA 1 99 -15 1639 136 84 7 chr2 235268276 235268549 -17988034 + AluJb SINE Alu 11 304 -8 2420 80 6 13 chr2 235268788 235269099 -17987484 - AluSc SINE Alu 0 309 1 23 33 0 0 chr2 235269877 235269907 -17986676 + AT_rich Low_complexity Low_complexity 1 30 0 1798 168 26 16 chr2 235270243 235270547 -17986036 - AluSx SINE Alu -5 307 1 2344 94 0 3 chr2 235270792 235271091 -17985492 - AluSg1 SINE Alu -11 298 1 2070 122 14 0 chr2 235271867 235272177 -17984406 - AluSx SINE Alu 0 314 1 1782 161 3 45 chr2 235272420 235272553 -17984030 + AluJb SINE Alu 1 138 -174 494 16 16 0 chr2 235272553 235272616 -17983967 + (TCTA)n Simple_repeat Simple_repeat 3 66 0 1782 161 3 45 chr2 235272616 235272792 -17983791 + AluJb SINE Alu 138 297 -15 2381 106 0 0 chr2 235272794 235273105 -17983478 + AluSx SINE Alu 1 311 -1 471 233 55 27 chr2 235273339 235273485 -17983098 - MIR3 SINE MIR -27 181 32 1309 324 68 12 chr2 235273554 235274393 -17982190 + HERV16 LTR ERVL 396 1281 -3715 1558 299 60 9 chr2 235274632 235275271 -17981312 + HERV16 LTR ERVL 1606 2276 -2720 295 200 13 27 chr2 235275380 235275455 -17981128 + HERV16 LTR ERVL 4619 4692 -304 264 286 10 0 chr2 235275503 235275601 -17980982 + HERV16 LTR ERVL 5180 5278 -376 842 256 126 14 chr2 235275839 235276187 -17980396 + LTR16B LTR ERVL 68 454 -10 26 30 0 0 chr2 235276307 235276340 -17980243 + AT_rich Low_complexity Low_complexity 1 33 0 1763 148 14 7 chr2 235276733 235277047 -17979536 - AluJb SINE Alu 0 316 1 704 243 224 0 chr2 235277068 235277331 -17979252 - MER115 DNA AcHobo 0 693 372 406 292 111 72 chr2 235277486 235277863 -17978720 - MER115 DNA AcHobo -300 393 2 444 271 84 27 chr2 235278053 235278278 -17978305 - L1ME3A LINE L1 -236 5934 5697 781 289 106 19 chr2 235278578 235278945 -17977638 + L2 LINE L2 30 428 -2886 534 249 69 132 chr2 235278945 235279465 -17977118 + L2 LINE L2 2662 3163 -150 189 0 0 0 chr2 235279468 235279489 -17977094 + (TC)n Simple_repeat Simple_repeat 2 22 0 2066 99 0 18 chr2 235279491 235279764 -17976819 - AluSq SINE Alu -45 268 1 300 261 275 7 chr2 235281403 235281545 -17975038 - MIR3 SINE MIR -9 199 20 2513 64 0 0 chr2 235282414 235282711 -17973872 - AluY SINE Alu -14 297 1 24 0 0 0 chr2 235284577 235284601 -17971982 + AT_rich Low_complexity Low_complexity 1 24 0 1796 166 23 31 chr2 235284734 235284897 -17971686 + L1MD1 LINE L1 5538 5701 -541 2106 65 3 90 chr2 235284897 235285218 -17971365 - AluY SINE Alu -18 293 1 1796 166 23 31 chr2 235285218 235285439 -17971144 + L1MD1 LINE L1 5701 5919 -323 566 179 8 0 chr2 235285447 235285564 -17971019 + L1MD1 LINE L1 6125 6242 0 5752 144 18 5 chr2 235285943 235287200 -17969383 + L1MA8 LINE L1 5016 6287 -4 192 77 0 0 chr2 235288391 235288417 -17968166 + (TG)n Simple_repeat Simple_repeat 1 26 0 387 208 26 0 chr2 235288742 235288819 -17967764 - L2 LINE L2 -208 3064 2986 412 162 98 128 chr2 235288831 235288984 -17967599 + SATR1 Satellite Satellite 32 275 -284 236 336 30 7 chr2 235289720 235289858 -17966725 - MIR SINE MIR -74 134 36 2346 95 3 0 chr2 235289936 235290241 -17966342 - AluSp SINE Alu -7 306 1 2276 109 0 0 chr2 235291541 235291835 -17964748 - AluSx SINE Alu -18 294 1 307 235 15 0 chr2 235292148 235292216 -17964367 + MER5A DNA MER1_type 3 71 -118 569 144 0 11 chr2 235292218 235292308 -17964275 - AluJb SINE Alu -14 298 210 2289 99 10 0 chr2 235292312 235292606 -17963977 - AluSc SINE Alu -12 297 1 21 0 0 0 chr2 235293367 235293388 -17963195 + AT_rich Low_complexity Low_complexity 1 21 0 1702 223 84 7 chr2 235293635 235294097 -17962486 + MLT1D LTR MaLR 1 498 -7 685 287 54 9 chr2 235294279 235294502 -17962081 + MIR SINE MIR 5 237 -25 23 0 0 0 chr2 235294768 235294791 -17961792 + AT_rich Low_complexity Low_complexity 1 23 0 2218 99 0 14 chr2 235294791 235295085 -17961498 - AluSc SINE Alu -19 290 1 2023 153 172 2 chr2 235295751 235296157 -17960426 + MER41E LTR ERV1 1 475 -37 1532 167 75 33 chr2 235296421 235296781 -17959802 + THE1C LTR MaLR 1 375 0 26 0 0 0 chr2 235297260 235297286 -17959297 + AT_rich Low_complexity Low_complexity 1 26 0 480 35 0 0 chr2 235300652 235300710 -17955873 + (CCAA)n Simple_repeat Simple_repeat 2 59 0 333 0 0 0 chr2 235300876 235300913 -17955670 + (CA)n Simple_repeat Simple_repeat 2 38 0 1543 229 98 2 chr2 235301571 235301969 -17954614 - MER63B DNA MER1_type 0 436 1 568 278 19 25 chr2 235302302 235302464 -17954119 + MLT1G1 LTR MaLR 430 590 -5 33 43 0 0 chr2 235303856 235303903 -17952680 + AT_rich Low_complexity Low_complexity 1 47 0 2170 99 11 0 chr2 235304188 235304471 -17952112 + AluSc SINE Alu 1 286 -23 305 320 63 71 chr2 235304746 235304999 -17951584 + L3 LINE CR1 1261 1511 -66 23 54 0 0 chr2 235306184 235306221 -17950362 + AT_rich Low_complexity Low_complexity 1 37 0 460 276 42 68 chr2 235306236 235306372 -17950211 - MIR SINE MIR -58 204 73 1624 172 3 59 chr2 235306372 235306692 -17949891 - AluJo SINE Alu -10 302 1 460 276 42 68 chr2 235306692 235306747 -17949836 - MIR SINE MIR -189 73 18 219 238 148 57 chr2 235307133 235307274 -17949309 - MIR3 SINE MIR -62 146 3 1216 87 0 0 chr2 235307558 235307707 -17948876 - AluSg SINE Alu -161 149 1 995 250 18 0 chr2 235309219 235309439 -17947144 - MER58A DNA MER1_type 0 224 1 2344 39 3 14 chr2 235309562 235309869 -17946714 - AluY SINE Alu 0 304 1 2144 109 7 7 chr2 235310344 235310638 -17945945 + AluSx SINE Alu 1 294 -18 292 208 0 0 chr2 235311624 235311677 -17944906 - MIR SINE MIR 0 262 210 213 151 0 0 chr2 235311953 235312006 -17944577 + CT-rich Low_complexity Low_complexity 2 54 0 2831 264 71 23 chr2 235312060 235313194 -17943389 - L1MC4 LINE L1 -102 7706 6624 297 0 0 0 chr2 235313194 235313227 -17943356 + (CA)n Simple_repeat Simple_repeat 2 34 0 2831 264 71 23 chr2 235313227 235313419 -17943164 - L1MC4 LINE L1 -1184 6624 6443 209 243 14 0 chr2 235314426 235314496 -17942087 + (TA)n Simple_repeat Simple_repeat 2 72 0 26 30 0 0 chr2 235314823 235314856 -17941727 + AT_rich Low_complexity Low_complexity 1 33 0 2838 91 5 3 chr2 235316107 235316481 -17940102 + THE1C LTR MaLR 1 375 0 901 302 170 29 chr2 235316583 235316934 -17939649 + L2 LINE L2 1866 2166 -1147 2380 109 0 0 chr2 235316934 235317245 -17939338 - AluSx SINE Alu -1 311 1 901 302 170 29 chr2 235317245 235318163 -17938420 + L2 LINE L2 2166 3312 -1 512 296 79 11 chr2 235318387 235318576 -17938007 - MIR SINE MIR -13 249 48 1717 154 12 68 chr2 235319412 235319737 -17936846 + AluJb SINE Alu 1 307 -5 26 0 0 0 chr2 235321657 235321683 -17934900 + AT_rich Low_complexity Low_complexity 1 26 0 702 305 141 21 chr2 235322621 235323103 -17933480 + L2 LINE L2 1774 2313 -1001 257 361 46 8 chr2 235323743 235323873 -17932710 - L2 LINE L2 -243 3070 2936 358 379 53 19 chr2 235324361 235324567 -17932016 - MIR SINE MIR -34 228 16 2228 127 0 9 chr2 235325593 235325908 -17930675 + AluSx SINE Alu 1 312 0 22 0 0 0 chr2 235326342 235326364 -17930219 + AT_rich Low_complexity Low_complexity 1 22 0 357 252 136 41 chr2 235327071 235327218 -17929365 - L2 LINE L2 -1 3312 3152 232 309 52 0 chr2 235327697 235327802 -17928781 + MIR SINE MIR 64 178 -81 270 164 0 0 chr2 235328296 235328351 -17928232 + (TGAA)n Simple_repeat Simple_repeat 2 56 0 215 274 48 16 chr2 235329412 235329474 -17927109 + L2 LINE L2 3205 3268 -4 424 333 16 8 chr2 235329675 235329804 -17926779 - MIR SINE MIR -112 150 21 245 310 10 30 chr2 235329834 235329934 -17926649 + L3 LINE CR1 1453 1550 -27 472 319 127 57 chr2 235331038 235331104 -17925479 + L2 LINE L2 2893 2953 -360 2281 110 0 0 chr2 235331104 235331414 -17925169 - AluSx SINE Alu -2 310 1 472 319 127 57 chr2 235331414 235331733 -17924850 + L2 LINE L2 2953 3305 -8 1516 144 45 68 chr2 235332886 235333178 -17923405 - AluSx SINE Alu -27 285 1 607 257 54 22 chr2 235333789 235334065 -17922518 - L1MA9 LINE L1 -38 6274 5990 * 1359 183 4 0 chr2 235334062 235334325 -17922258 + L1M2 LINE L1 5525 5788 -524 315 0 0 0 chr2 235334336 235334371 -17922212 + (TG)n Simple_repeat Simple_repeat 2 36 0 254 160 20 0 chr2 235334375 235334425 -17922158 - L1MA9 LINE L1 -534 5778 5728 427 247 0 18 chr2 235334428 235334594 -17921989 + (TATG)n Simple_repeat Simple_repeat 4 166 0 273 194 32 0 chr2 235334601 235334663 -17921920 - L1M2 LINE L1 -519 5793 5730 237 209 0 0 chr2 235334663 235334706 -17921877 + (TG)n Simple_repeat Simple_repeat 1 43 0 600 205 0 27 chr2 235334710 235334895 -17921688 + (TATG)n Simple_repeat Simple_repeat 1 180 0 298 183 0 43 chr2 235334909 235335002 -17921581 + (TATG)n Simple_repeat Simple_repeat 2 90 0 798 184 56 15 chr2 235335003 235335199 -17921384 + L1MA9 LINE L1 5775 5978 -334 284 136 0 17 chr2 235335535 235335594 -17920989 - L1MB4 LINE L1 0 6180 6123 194 260 104 21 chr2 235335910 235336006 -17920577 + L2 LINE L2 1081 1184 -2130 574 265 56 9 chr2 235336657 235336907 -17919676 + L1ME2 LINE L1 5743 5940 -224 389 20 20 0 chr2 235337182 235337232 -17919351 + (TGGA)n Simple_repeat Simple_repeat 2 52 0 319 267 58 119 chr2 235338108 235338231 -17918352 - L2 LINE L2 -79 3234 3105 2104 141 3 6 chr2 235338231 235338543 -17918040 + AluSx SINE Alu 1 311 -1 319 267 58 119 chr2 235338543 235338846 -17917737 - L2 LINE L2 -208 3105 2834 514 299 80 20 chr2 235339225 235339426 -17917157 + MIR SINE MIR 36 248 -14 486 300 152 23 chr2 235340909 235341286 -17915297 + L2 LINE L2 2619 3040 -273 381 235 83 76 chr2 235341647 235341779 -17914804 - L2 LINE L2 -1 3312 3180 224 254 17 0 chr2 235341795 235341854 -17914729 - L2 LINE L2 -241 3072 3013 240 35 0 0 chr2 235341930 235341959 -17914624 + (TG)n Simple_repeat Simple_repeat 2 30 0 189 0 0 0 chr2 235341958 235341979 -17914604 + (TA)n Simple_repeat Simple_repeat 1 21 0 * 22 35 0 0 chr2 235342514 235342543 -17914040 + AT_rich Low_complexity Low_complexity 1 29 0 2150 116 0 26 chr2 235342543 235342854 -17913729 + AluSx SINE Alu 1 303 -9 227 304 80 40 chr2 235343127 235343252 -17913331 - L3b LINE CR1 -146 1437 1308 3024 91 36 0 chr2 235343380 235343822 -17912761 - L1MA2 LINE L1 0 6304 5847 201 347 13 13 chr2 235343979 235344054 -17912529 + L3b LINE CR1 1506 1580 -3 2319 59 3 0 chr2 235344702 235344990 -17911593 - AluY SINE Alu -22 289 1 702 326 42 16 chr2 235345463 235345776 -17910807 - L2 LINE L2 -4 3309 2989 285 305 30 91 chr2 235345978 235346175 -17910408 + MIR3 SINE MIR 14 198 -10 318 286 189 29 chr2 235346438 235346613 -17909970 - MIR SINE MIR -34 228 26 373 240 285 22 chr2 235346713 235346892 -17909691 + MIR SINE MIR 32 257 -5 252 217 0 87 chr2 235347086 235347155 -17909428 + L3 LINE CR1 1512 1574 -3 267 305 17 25 chr2 235347729 235347847 -17908736 - MER5A DNA MER1_type -35 154 38 * 430 293 0 0 chr2 235347746 235347852 -17908731 + MER5A DNA MER1_type 63 168 -21 181 189 0 0 chr2 235348060 235348097 -17908486 + L2 LINE L2 3275 3311 -2 347 256 91 8 chr2 235348653 235348774 -17907809 + MER94 DNA DNA 2 132 -2 2328 55 0 17 chr2 235348927 235349219 -17907364 + AluY SINE Alu 1 287 -24 183 42 0 0 chr2 235349227 235349251 -17907332 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2788 16 0 6 chr2 235351350 235351664 -17904919 - AluYb8 SINE Alu -6 312 1 261 320 161 42 chr2 235351775 235352413 -17904170 + L2 LINE L2 1921 2634 -680 186 43 0 0 chr2 235352573 235352596 -17903987 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 604 111 0 128 chr2 235352598 235352715 -17903868 - AluY SINE Alu -31 280 179 469 201 31 19 chr2 235352891 235353219 -17903364 + (CA)n Simple_repeat Simple_repeat 1 332 0 21 82 0 0 chr2 235353804 235353853 -17902730 + AT_rich Low_complexity Low_complexity 1 49 0 2204 70 0 4 chr2 235354150 235354421 -17902162 + AluSx SINE Alu 35 304 -8 2150 104 34 0 chr2 235355061 235355236 -17901347 - AluSp SINE Alu -6 307 116 221 0 0 33 chr2 235355236 235355266 -17901317 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2150 104 34 0 chr2 235355266 235355387 -17901196 - AluSp SINE Alu -197 116 1 1931 115 0 74 chr2 235355889 235356060 -17900523 - AluSq SINE Alu -24 289 150 227 31 31 0 chr2 235356060 235356092 -17900491 + (TA)n Simple_repeat Simple_repeat 2 34 0 1931 115 0 74 chr2 235356092 235356232 -17900351 - AluSq SINE Alu -163 150 1 21 0 0 0 chr2 235356495 235356516 -17900067 + AT_rich Low_complexity Low_complexity 1 21 0 1706 159 32 36 chr2 235356831 235357140 -17899443 + AluJb SINE Alu 1 308 -4 291 192 20 20 chr2 235357482 235357628 -17898955 + (CA)n Simple_repeat Simple_repeat 1 146 0 2486 63 0 3 chr2 235357921 235358223 -17898360 + AluY SINE Alu 1 301 -10 262 267 12 0 chr2 235358471 235358557 -17898026 - MER103 DNA DNA -5 161 75 216 111 0 0 chr2 235358558 235358594 -17897989 + (TG)n Simple_repeat Simple_repeat 1 36 0 312 27 0 0 chr2 235358682 235358719 -17897864 + (TG)n Simple_repeat Simple_repeat 2 38 0 342 67 0 0 chr2 235358931 235358976 -17897607 + (TG)n Simple_repeat Simple_repeat 2 46 0 1620 218 0 10 chr2 235359004 235359312 -17897271 - AluJo SINE Alu -7 305 1 340 241 69 0 chr2 235360158 235360245 -17896338 + MIR SINE MIR 81 173 -89 204 231 19 19 chr2 235360787 235360839 -17895744 + MER5A DNA MER1_type 1 52 -137 449 275 85 28 chr2 235360930 235361177 -17895406 + MIR SINE MIR 2 262 0 299 268 38 1 chr2 235361839 235361987 -17894596 - L1ME LINE L1 -739 5431 5280 220 179 0 0 chr2 235362004 235362043 -17894540 + (TG)n Simple_repeat Simple_repeat 2 40 0 2102 92 3 36 chr2 235362215 235362560 -17894023 - AluY SINE Alu 0 311 1 257 252 65 49 chr2 235362594 235362717 -17893866 - L1ME LINE L1 -1147 4999 4875 623 314 127 48 chr2 235362794 235363718 -17892865 + L1 LINE L1 3594 4590 -1556 215 304 0 0 chr2 235364287 235364333 -17892250 - L2 LINE L2 0 3272 3227 994 165 16 6 chr2 235364455 235364637 -17891946 + MSTB LTR MaLR 1 184 -242 1164 110 0 0 chr2 235364637 235364782 -17891801 + AluSq/x SINE Alu 1 145 -168 2207 128 0 0 chr2 235364782 235365086 -17891497 + AluSx SINE Alu 1 304 -8 180 359 98 0 chr2 235366364 235366456 -17890127 - L2 LINE L2 -597 2717 2617 2784 159 17 13 chr2 235367419 235367942 -17888641 - L1MB7 LINE L1 0 6184 5660 207 339 51 0 chr2 235369531 235369590 -17886993 - L2 LINE L2 -19 3253 3192 509 139 90 66 chr2 235369661 235369783 -17886800 + FLAM_C SINE Alu 1 125 -18 190 244 22 0 chr2 235369800 235369845 -17886738 - L2 LINE L2 -12 3260 3215 693 292 107 45 chr2 235370080 235370777 -17885806 - L2 LINE L2 -4 3309 2564 202 254 77 100 chr2 235370914 235371044 -17885539 + L2 LINE L2 3182 3308 -5 926 222 92 44 chr2 235371480 235371795 -17884788 - MER58B DNA MER1_type -5 336 7 485 267 84 55 chr2 235372214 235372416 -17884167 + L2 LINE L2 2926 3133 -180 184 308 48 48 chr2 235372808 235373016 -17883567 - L2 LINE L2 -421 2893 2686 2107 131 10 10 chr2 235373279 235373591 -17882992 + AluSx SINE Alu 1 312 0 430 70 0 0 chr2 235377466 235377523 -17879060 + tRNA-His-CAC tRNA tRNA 1 57 -18 524 299 94 5 chr2 235378838 235379039 -17877544 + MIR SINE MIR 1 219 -43 256 139 0 0 chr2 235379153 235379196 -17877387 + L2 LINE L2 3271 3313 0 326 289 79 26 chr2 235379846 235380036 -17876547 + L1ME4a LINE L1 5720 5919 -202 271 68 23 0 chr2 235380123 235380167 -17876416 + L1ME4a LINE L1 6060 6104 -17 189 343 29 14 chr2 235380551 235380621 -17875962 + MIR SINE MIR 35 105 -157 23 33 0 0 chr2 235380857 235380887 -17875696 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 235382800 235382821 -17873762 + AT_rich Low_complexity Low_complexity 1 21 0 196 357 76 29 chr2 235384500 235384671 -17871912 - MIR SINE MIR -56 206 28 2294 104 0 0 chr2 235384922 235385221 -17871362 + AluSx SINE Alu 1 299 -13 2271 116 0 0 chr2 235387112 235387423 -17869160 - AluY SINE Alu 0 311 1 550 217 77 72 chr2 235387838 235388045 -17868538 - MIR SINE MIR -42 220 13 213 175 25 0 chr2 235388477 235388517 -17868066 + (TA)n Simple_repeat Simple_repeat 2 42 0 1031 203 23 23 chr2 235388589 235388806 -17867777 + MER20B DNA MER1_type 3 219 0 308 276 79 13 chr2 235390283 235390435 -17866148 + Charlie7 DNA MER1_type 34 195 -2417 475 326 50 31 chr2 235390478 235390739 -17865844 + L2 LINE L2 3045 3310 -3 379 214 51 0 chr2 235390751 235390849 -17865734 + Charlie7 DNA MER1_type 603 705 -1907 798 247 85 25 chr2 235392468 235392703 -17863880 + MIR SINE MIR 9 257 -5 204 343 109 51 chr2 235392702 235392976 -17863607 - L2 LINE L2 -364 2950 2661 * 670 248 87 62 chr2 235393106 235393348 -17863235 - MIR SINE MIR 0 262 15 310 299 102 15 chr2 235393889 235394026 -17862557 + MIR SINE MIR 32 180 -82 237 180 0 0 chr2 235394153 235394203 -17862380 + (TATG)n Simple_repeat Simple_repeat 3 52 0 1456 230 49 82 chr2 235394411 235395004 -17861579 - MLT1E2 LTR MaLR 0 626 78 2767 7 0 0 chr2 235395412 235395711 -17860872 - AluYa5 SINE Alu -12 299 1 641 226 119 8 chr2 235396528 235396763 -17859820 - MER20B DNA MER1_type -18 765 505 373 288 82 24 chr2 235398282 235398452 -17858131 - L2 LINE L2 0 3313 3134 286 294 61 56 chr2 235398449 235398663 -17857920 + MIR SINE MIR 6 220 -42 * 2178 83 26 35 chr2 235400753 235401065 -17855518 + AluSg SINE Alu 1 309 -1 21 0 0 0 chr2 235401447 235401468 -17855115 + AT_rich Low_complexity Low_complexity 1 21 0 2698 105 5 0 chr2 235402113 235402486 -17854097 + THE1C LTR MaLR 1 375 0 188 310 99 0 chr2 235402962 235403033 -17853550 + L2 LINE L2 3235 3312 -1 1109 126 32 16 chr2 235403502 235403692 -17852891 - THE1B LTR MaLR -171 193 1 544 253 219 26 chr2 235404659 235404686 -17851897 + L2 LINE L2 524 544 -2770 2335 144 16 10 chr2 235404686 235405074 -17851509 + MLT1B LTR MaLR 1 390 0 544 253 219 26 chr2 235405074 235405279 -17851304 + L2 LINE L2 544 801 -2513 395 287 18 18 chr2 235405444 235405611 -17850972 + L2 LINE L2 800 966 -2348 183 80 0 0 chr2 235405625 235405650 -17850933 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 431 308 53 6 chr2 235405986 235406155 -17850428 - HAL1 LINE L1 -87 2420 2244 268 225 113 0 chr2 235406173 235406253 -17850330 - HAL1 LINE L1 -337 2170 2082 1022 289 58 33 chr2 235406532 235407083 -17849500 - HAL1 LINE L1 -745 1762 1198 332 328 64 6 chr2 235407933 235408104 -17848479 - L2 LINE L2 0 3313 3133 564 263 226 3 chr2 235408410 235408760 -17847823 + L2 LINE L2 440 867 -2447 3320 176 5 26 chr2 235408862 235408910 -17847673 + MER54A LTR ERVL 86 134 -767 234 0 0 0 chr2 235408910 235408936 -17847647 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1957 132 20 3 chr2 235408939 235409234 -17847349 - AluSq SINE Alu -10 303 4 3320 176 5 26 chr2 235409234 235409784 -17846799 + MER54A LTR ERVL 136 675 -226 1108 167 81 0 chr2 235409900 235410110 -17846473 + MER54A LTR ERVL 675 901 0 194 241 0 37 chr2 235410110 235410164 -17846419 + L2 LINE L2 2257 2308 -1006 363 277 54 7 chr2 235410335 235410483 -17846100 - L1MDb LINE L1 -6006 403 249 240 312 21 21 chr2 235410646 235410739 -17845844 - MIR SINE MIR -4 258 166 2324 94 0 3 chr2 235410744 235411041 -17845542 - AluY SINE Alu -15 296 1 362 322 73 66 chr2 235411184 235411470 -17845113 - L1ME LINE L1 -351 5770 5483 206 330 41 10 chr2 235411525 235411622 -17844961 - L2 LINE L2 0 3313 3214 549 294 5 15 chr2 235412074 235412271 -17844312 - MLT1E LTR MaLR -398 195 1 1572 103 14 0 chr2 235412906 235413119 -17843464 - AluSq SINE Alu -10 303 88 209 299 90 0 chr2 235413228 235413295 -17843288 - L2 LINE L2 -38 3275 3203 224 344 10 10 chr2 235413400 235413496 -17843087 - MIR3 SINE MIR -36 172 77 1382 270 66 23 chr2 235413924 235414460 -17842123 - L2 LINE L2 -1 3312 2756 202 274 65 0 chr2 235416722 235416784 -17839799 - MIR SINE MIR -95 167 102 403 279 9 0 chr2 235417252 235417363 -17839220 - MER81 DNA DNA -1 113 2 2552 50 6 0 chr2 235419168 235419487 -17837096 + L1PA5 LINE L1 5828 6148 -6 2323 95 7 0 chr2 235419547 235419851 -17836732 - AluSp SINE Alu -7 306 1 309 358 15 30 chr2 235419860 235419994 -17836589 - MIR3 SINE MIR -64 144 13 258 114 0 0 chr2 235421307 235421351 -17835232 + MADE1 DNA Mariner 2 45 -35 231 224 0 0 chr2 235421373 235421422 -17835161 - MADE1 DNA Mariner -31 49 1 187 143 18 18 chr2 235421516 235421572 -17835011 + (TG)n Simple_repeat Simple_repeat 1 56 0 238 297 49 103 chr2 235423841 235423967 -17832616 - MER5A DNA MER1_type -14 175 61 2251 117 0 3 chr2 235423967 235424274 -17832309 + AluSx SINE Alu 4 309 -3 238 297 49 103 chr2 235424274 235424332 -17832251 - MER5A DNA MER1_type -128 61 1 701 179 10 92 chr2 235424639 235424846 -17831737 - MER20B DNA MER1_type 0 219 30 1463 196 32 21 chr2 235424921 235425201 -17831382 - AluJo SINE Alu -19 293 11 597 298 25 43 chr2 235425597 235425832 -17830751 + MIR SINE MIR 28 258 -4 221 330 80 10 chr2 235426830 235426930 -17829653 + MIR SINE MIR 16 122 -86 23 33 0 0 chr2 235427048 235427078 -17829505 + AT_rich Low_complexity Low_complexity 1 30 0 219 146 0 0 chr2 235427788 235427829 -17828754 + (TTA)n Simple_repeat Simple_repeat 2 42 0 2644 35 3 0 chr2 235428350 235428660 -17827923 - AluY SINE Alu 0 311 1 323 268 63 21 chr2 235428863 235429005 -17827578 + MER103 DNA DNA 7 154 -12 2232 90 0 0 chr2 235429019 235429427 -17827156 - AluSc SINE Alu 0 408 1 610 285 25 13 chr2 235430525 235430760 -17825823 + Charlie8 DNA MER1_type 39 276 -2141 21 36 0 0 chr2 235431611 235431639 -17824944 + AT_rich Low_complexity Low_complexity 1 28 0 859 191 0 38 chr2 235432108 235432291 -17824292 - FRAM SINE Alu 0 176 1 2494 54 0 3 chr2 235434705 235435002 -17821581 - AluY SINE Alu -15 296 1 21 36 0 0 chr2 235435528 235435556 -17821027 + AT_rich Low_complexity Low_complexity 1 28 0 315 272 92 58 chr2 235437906 235438079 -17818504 - MIR SINE MIR -36 226 48 299 277 156 21 chr2 235438622 235438763 -17817820 + MIR3 SINE MIR 44 203 -5 514 230 0 0 chr2 235439171 235439284 -17817299 + MER3 DNA MER1_type 55 167 -42 1493 200 21 5 chr2 235439293 235439678 -17816905 + MER3 DNA MER1_type 2233 2623 0 693 280 4 50 chr2 235440746 235440849 -17815734 - MIR SINE MIR 0 262 156 1915 166 72 68 chr2 235440849 235441348 -17815235 + MLT1D LTR MaLR 1 501 -4 693 280 4 50 chr2 235441348 235441483 -17815100 - MIR SINE MIR -106 156 35 218 267 0 17 chr2 235441577 235441637 -17814946 + L2 LINE L2 2997 3055 -217 319 111 49 12 chr2 235442414 235442495 -17814088 + (TA)n Simple_repeat Simple_repeat 1 84 0 2192 52 1 0 chr2 235443736 235444026 -17812557 + L1PA8 LINE L1 5869 6161 -11 23 0 0 0 chr2 235444299 235444322 -17812261 + AT_rich Low_complexity Low_complexity 1 23 0 519 177 89 103 chr2 235444358 235444561 -17812022 - MER58C DNA MER1_type 0 215 16 2135 116 3 3 chr2 235445775 235446067 -17810516 + AluSg SINE Alu 1 292 -18 1173 295 82 11 chr2 235446372 235446752 -17809831 + L2 LINE L2 2262 2668 -646 924 288 4 4 chr2 235446811 235447044 -17809539 - MIR SINE MIR -21 241 9 733 266 60 12 chr2 235447050 235447368 -17809215 + L2 LINE L2 2741 3067 -246 * 907 237 36 18 chr2 235447361 235447585 -17808998 - MIR SINE MIR -16 246 19 340 319 16 22 chr2 235447770 235447955 -17808628 + MER5A DNA MER1_type 4 187 -2 296 308 0 10 chr2 235448082 235448186 -17808397 + L2 LINE L2 3211 3313 0 267 291 55 27 chr2 235448341 235448451 -17808132 + MIR SINE MIR 25 137 -125 1237 133 0 0 chr2 235452463 235452636 -17803947 - AluSg/x SINE Alu -12 300 128 198 150 0 0 chr2 235452984 235453024 -17803559 + (TTATA)n Simple_repeat Simple_repeat 5 44 0 1442 230 38 16 chr2 235454060 235454232 -17802351 + MLT1B LTR MaLR 3 170 -220 183 42 0 0 chr2 235454232 235454256 -17802327 + (TC)n Simple_repeat Simple_repeat 2 25 0 1442 230 38 16 chr2 235454256 235454453 -17802130 + MLT1B LTR MaLR 170 380 -10 212 296 128 16 chr2 235455556 235455681 -17800902 + MIR SINE MIR 96 234 -28 690 255 51 10 chr2 235456036 235456232 -17800351 - MIR SINE MIR -21 241 38 192 125 0 0 chr2 235457043 235457075 -17799508 + (CAT)n Simple_repeat Simple_repeat 1 32 0 369 285 93 40 chr2 235457924 235458075 -17798508 + MIR SINE MIR 3 161 -101 231 61 0 0 chr2 235458208 235458241 -17798342 + (TTG)n Simple_repeat Simple_repeat 2 34 0 218 246 18 0 chr2 235459060 235459117 -17797466 + (TTA)n Simple_repeat Simple_repeat 2 59 0 403 301 75 30 chr2 235460360 235460493 -17796090 + MIR3 SINE MIR 65 203 -5 318 333 53 53 chr2 235460853 235461042 -17795541 + MIR SINE MIR 60 248 -14 447 273 31 23 chr2 235461840 235461968 -17794615 + MIR SINE MIR 3 131 -131 1840 218 49 51 chr2 235462431 235462963 -17793620 - MLT1F LTR MaLR 0 542 12 433 259 83 0 chr2 235463979 235464087 -17792496 + MIR SINE MIR 36 152 -110 369 181 42 0 chr2 235464100 235464172 -17792411 + MER94 DNA DNA 1 75 -59 325 100 17 17 chr2 235464813 235464873 -17791710 + (TTCC)n Simple_repeat Simple_repeat 3 62 0 2122 101 0 0 chr2 235464874 235465152 -17791431 - AluSx SINE Alu -34 278 1 2080 140 0 0 chr2 235466529 235466814 -17789769 + AluSx SINE Alu 1 285 -27 213 94 0 0 chr2 235466843 235466875 -17789708 + (TC)n Simple_repeat Simple_repeat 1 32 0 286 184 105 0 chr2 235466875 235466951 -17789632 - FLAM SINE Alu -5 128 45 429 103 0 0 chr2 235467072 235467140 -17789443 + (TCCC)n Simple_repeat Simple_repeat 1 68 0 426 288 8 16 chr2 235467152 235467277 -17789306 - L2 LINE L2 -1 3312 3189 402 39 0 0 chr2 235467817 235467869 -17788714 + (CA)n Simple_repeat Simple_repeat 1 52 0 2011 125 21 0 chr2 235468325 235468612 -17787971 + AluSx SINE Alu 4 296 -16 2401 84 3 0 chr2 235468914 235469212 -17787371 - AluY SINE Alu -12 299 1 1735 185 12 6 chr2 235469268 235469609 -17786974 - MLT1A1 LTR MaLR 0 365 23 194 377 23 31 chr2 235469641 235469771 -17786812 - L2 LINE L2 -185 3087 2959 1973 151 13 0 chr2 235470664 235470969 -17785614 - AluJb SINE Alu -3 309 1 911 244 82 58 chr2 235471708 235472159 -17784424 + MLT1C LTR MaLR 6 467 0 406 206 38 76 chr2 235472159 235472290 -17784293 - MIR SINE MIR -116 146 21 996 259 33 38 chr2 235473044 235473523 -17783060 + MER113 DNA MER1_type? 1 477 -44 24 0 0 0 chr2 235473730 235473754 -17782829 + AT_rich Low_complexity Low_complexity 1 24 0 280 387 42 7 chr2 235474686 235474828 -17781755 + L3 LINE CR1 232 378 -1199 496 330 175 7 chr2 235475090 235475529 -17781054 + L3 LINE CR1 790 1302 -275 252 362 17 17 chr2 235475664 235475780 -17780803 + L3 LINE CR1 1308 1423 -154 786 178 0 0 chr2 235475796 235475925 -17780658 - FLAM_A SINE Alu -4 129 1 241 322 133 44 chr2 235476267 235476447 -17780136 - MIR3 SINE MIR -10 198 3 207 146 0 0 chr2 235477266 235477307 -17779276 + (A)n Simple_repeat Simple_repeat 1 41 0 574 288 109 33 chr2 235477550 235477880 -17778703 - MLT1H LTR MaLR 0 549 195 322 330 73 22 chr2 235480324 235480503 -17776080 - MIR SINE MIR 0 262 75 192 40 0 0 chr2 235481712 235481737 -17774846 + (T)n Simple_repeat Simple_repeat 1 25 0 498 256 0 0 chr2 235484115 235484295 -17772288 + (TA)n Simple_repeat Simple_repeat 1 180 0 2106 96 0 64 chr2 235484338 235484650 -17771933 - AluSx SINE Alu -20 292 1 309 145 0 0 chr2 235485020 235485082 -17771501 + (GA)n Simple_repeat Simple_repeat 2 63 0 410 31 103 0 chr2 235486115 235486212 -17770371 + (TA)n Simple_repeat Simple_repeat 1 107 0 490 212 7 7 chr2 235486252 235486398 -17770185 + (TA)n Simple_repeat Simple_repeat 2 147 0 339 238 6 119 chr2 235486402 235486570 -17770013 + L1MC3 LINE L1 6549 6678 -1107 207 214 0 0 chr2 235487923 235487965 -17768618 + T-rich Low_complexity Low_complexity 1 42 0 243 270 203 0 chr2 235489663 235489737 -17766846 + MIR SINE MIR 5 93 -169 322 181 51 2 chr2 235489766 235489838 -17766745 + MIR SINE MIR 55 129 -79 2374 85 0 0 chr2 235490546 235490841 -17765742 - AluSp SINE Alu -18 295 1 520 245 91 35 chr2 235490942 235491304 -17765279 + L1ME LINE L1 5369 5760 -410 * 2190 232 125 23 chr2 235491292 235492075 -17764508 + L1MC4 LINE L1 7180 8042 0 1948 138 26 29 chr2 235492113 235492424 -17764159 + AluSg SINE Alu 1 310 0 21 57 0 0 chr2 235493427 235493462 -17763121 + AT_rich Low_complexity Low_complexity 1 35 0 2316 133 51 19 chr2 235494920 235495335 -17761248 + MSTA LTR MaLR 1 428 0 1689 244 113 9 chr2 235495555 235496104 -17760479 + MLT1E2 LTR MaLR 16 621 -5 226 243 81 63 chr2 235496550 235496661 -17759922 + MIR SINE MIR 18 130 -78 1985 152 0 0 chr2 235496671 235496977 -17759606 - AluSx SINE Alu 0 306 1 2236 125 0 6 chr2 235497367 235497680 -17758903 + AluSx SINE Alu 1 311 -1 321 298 87 0 chr2 235498511 235498615 -17757968 - L2 LINE L2 -5 3267 3155 333 357 9 0 chr2 235499660 235499772 -17756811 - MIR3 SINE MIR -15 193 81 2280 96 7 0 chr2 235500697 235500988 -17755595 - AluSx SINE Alu -19 293 1 531 317 103 9 chr2 235501718 235501942 -17754641 + MIR SINE MIR 2 246 -16 229 321 36 54 chr2 235502182 235502350 -17754233 - L2 LINE L2 -71 3242 3078 241 241 74 93 chr2 235502426 235502534 -17754049 - L2 LINE L2 -198 3074 2969 319 277 143 9 chr2 235502551 235502663 -17753920 - MIR SINE MIR -55 153 27 447 0 15 31 chr2 235503029 235503094 -17753489 + (TA)n Simple_repeat Simple_repeat 1 64 0 1607 213 21 27 chr2 235503176 235503552 -17753031 - MLT1A2 LTR MaLR 0 374 1 344 257 7 18 chr2 235503992 235504131 -17752452 - MER5A DNA MER1_type -3 186 12 339 325 117 0 chr2 235505055 235505218 -17751365 + MIR SINE MIR 68 249 -13 216 146 42 0 chr2 235505577 235505625 -17750958 + A-rich Low_complexity Low_complexity 1 50 0 269 211 0 0 chr2 235506511 235506568 -17750015 - L1ME3A LINE L1 -17 6153 6097 243 0 0 0 chr2 235507192 235507219 -17749364 + (TC)n Simple_repeat Simple_repeat 2 28 0 312 27 0 0 chr2 235508015 235508052 -17748531 + (TG)n Simple_repeat Simple_repeat 1 37 0 26 30 0 0 chr2 235509889 235509922 -17746661 + GC_rich Low_complexity Low_complexity 1 33 0 25 65 0 0 chr2 235510259 235510305 -17746278 + GC_rich Low_complexity Low_complexity 1 46 0 427 291 0 81 chr2 235510581 235510753 -17745830 - L2 LINE L2 0 3313 3156 249 265 44 0 chr2 235511670 235511738 -17744845 + L2 LINE L2 3241 3311 -2 277 296 316 0 chr2 235512482 235512678 -17743905 + MIR SINE MIR 1 258 -4 21 0 0 0 chr2 235513066 235513087 -17743496 + AT_rich Low_complexity Low_complexity 1 21 0 229 306 121 57 chr2 235513337 235513461 -17743122 - L2 LINE L2 -7 3265 3134 242 224 0 13 chr2 235513670 235513746 -17742837 + CT-rich Low_complexity Low_complexity 3 77 0 30 0 0 0 chr2 235514484 235514514 -17742069 + AT_rich Low_complexity Low_complexity 1 30 0 6118 53 18 4 chr2 235514514 235515471 -17741112 - L1PA8 LINE L1 -10 6162 5127 182 163 93 0 chr2 235515513 235515556 -17741027 - MIR SINE MIR -67 141 95 218 244 0 0 chr2 235516256 235516301 -17740282 + L3 LINE CR1 1334 1378 -199 257 312 50 31 chr2 235516525 235516926 -17739657 - L1 LINE L1 -2387 3759 3351 28 0 0 0 chr2 235516962 235516990 -17739593 + AT_rich Low_complexity Low_complexity 1 28 0 497 262 98 45 chr2 235517048 235517384 -17739199 - L1MC4 LINE L1 -150 7892 7539 2306 106 0 0 chr2 235517415 235517718 -17738865 - AluSg SINE Alu -7 303 1 28 48 0 0 chr2 235517744 235517786 -17738797 + AT_rich Low_complexity Low_complexity 1 42 0 5786 122 23 5 chr2 235517799 235518865 -17737718 - L1MA5A LINE L1 -65 6232 5142 3806 65 8 0 chr2 235519317 235519808 -17736775 + L1PA5 LINE L1 5660 6154 0 246 241 36 9 chr2 235519823 235519935 -17736648 - L1M4 LINE L1 -808 5338 5224 1454 145 14 0 chr2 235521035 235521256 -17735327 + AluSg/x SINE Alu 76 299 -11 207 0 0 0 chr2 235521335 235521358 -17735225 + (TG)n Simple_repeat Simple_repeat 2 24 0 2083 138 3 0 chr2 235521377 235521674 -17734909 - AluSq SINE Alu -15 298 1 2052 117 0 38 chr2 235521933 235522250 -17734333 + AluSx SINE Alu 1 305 -7 200 335 80 0 chr2 235522307 235522391 -17734192 - MIR SINE MIR -65 143 62 437 323 76 36 chr2 235522818 235523069 -17733514 - MIR SINE MIR 0 262 2 436 265 204 59 chr2 235523579 235523986 -17732597 - MLT1H LTR MaLR -4 545 80 1115 177 22 69 chr2 235524386 235525079 -17731504 - L1MC1 LINE L1 -446 5887 5156 1280 195 94 6 chr2 235525093 235525440 -17731143 + MSTD LTR MaLR 1 428 0 6786 228 23 38 chr2 235525440 235527383 -17729200 - L1MC1 LINE L1 -998 5148 3241 1895 105 16 0 chr2 235527383 235527641 -17728942 - AluSg SINE Alu -3 307 46 6786 228 23 38 chr2 235527641 235527935 -17728648 - L1MC1 LINE L1 -2905 3241 2944 822 291 80 36 chr2 235527941 235529054 -17727529 + L1M4 LINE L1 2680 3858 -2288 978 54 78 0 chr2 235529054 235529183 -17727400 - MER85 DNA T2_type 0 139 1 822 291 80 36 chr2 235529183 235529346 -17727237 + L1M4 LINE L1 3858 4012 -2134 309 284 40 34 chr2 235529827 235529975 -17726608 + L1M4 LINE L1 4484 4632 -1514 272 273 109 62 chr2 235531050 235531178 -17725405 - L2 LINE L2 0 3272 3139 497 232 151 101 chr2 235531960 235532318 -17724265 - MLT1D LTR MaLR 0 505 130 2078 153 137 11 chr2 235532371 235532751 -17723832 - MSTA LTR MaLR 0 428 1 21 71 0 0 chr2 235532842 235532884 -17723699 + AT_rich Low_complexity Low_complexity 1 42 0 297 333 29 9 chr2 235533666 235533771 -17722812 + MER63A DNA MER1_type 96 202 -8 1559 139 102 45 chr2 235533776 235534129 -17722454 + THE1C LTR MaLR 3 375 0 9094 141 22 33 chr2 235534132 235535662 -17720921 + THE1B-int LTR MaLR 4 1516 -64 847 195 6 13 chr2 235535662 235535821 -17720762 - MER2 DNA MER2_type -187 158 1 2249 134 8 30 chr2 235535922 235536294 -17720289 + THE1B LTR MaLR 1 364 0 255 227 0 0 chr2 235536319 235536363 -17720220 + MIR SINE MIR 62 105 -157 405 0 0 0 chr2 235536935 235536980 -17719603 + (TG)n Simple_repeat Simple_repeat 2 46 0 708 285 60 22 chr2 235538076 235538499 -17718084 + MLT1H LTR MaLR 2 589 -1 601 254 83 21 chr2 235538568 235538808 -17717775 - MER102a DNA MER1_type -6 324 70 279 0 0 0 chr2 235538816 235538847 -17717736 + (CA)n Simple_repeat Simple_repeat 2 32 0 279 79 0 0 chr2 235539646 235539684 -17716899 + (TG)n Simple_repeat Simple_repeat 1 38 0 352 265 41 61 chr2 235540530 235540677 -17715906 + MER5A DNA MER1_type 21 164 -25 469 252 0 9 chr2 235541696 235541807 -17714776 + L2 LINE L2 3192 3301 -12 252 100 0 0 chr2 235541810 235541850 -17714733 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 626 180 31 0 chr2 235542303 235542501 -17714082 + GA-rich Low_complexity Low_complexity 1 204 0 269 334 86 67 chr2 235542696 235543010 -17713573 + L2 LINE L2 2950 3269 -3 2196 241 48 55 chr2 235543912 235544637 -17711946 + L1MD2 LINE L1 5627 6346 -13 342 0 0 0 chr2 235544746 235544784 -17711799 + (TTA)n Simple_repeat Simple_repeat 2 39 0 209 244 11 100 chr2 235545082 235545172 -17711411 + L2 LINE L2 3105 3186 -86 608 316 162 32 chr2 235545271 235545702 -17710881 - MLT1K LTR MaLR -24 564 78 2043 141 0 0 chr2 235546724 235547023 -17709560 - AluSx SINE Alu -13 299 1 423 304 11 126 chr2 235547389 235547770 -17708813 + L2 LINE L2 2927 3263 -9 200 344 150 11 chr2 235547886 235548066 -17708517 + L2 LINE L2 2254 2458 -856 832 258 66 42 chr2 235548066 235548396 -17708187 - MER102a DNA MER1_type -1 329 11 307 329 88 7 chr2 235549268 235549405 -17707178 - MER115 DNA AcHobo -544 149 2 2349 133 11 11 chr2 235551851 235552226 -17704357 + THE1C LTR MaLR 1 375 0 258 325 13 13 chr2 235552885 235552962 -17703621 - MIR SINE MIR -176 86 10 225 238 25 0 chr2 235552973 235553095 -17703488 + (TA)n Simple_repeat Simple_repeat 1 125 0 269 200 0 0 chr2 235553179 235553234 -17703349 + L1MC4 LINE L1 6648 6702 -1340 309 230 0 0 chr2 235553235 235553309 -17703274 + (TA)n Simple_repeat Simple_repeat 2 75 0 2178 133 20 39 chr2 235553309 235553699 -17702884 + Tigger2a DNA MER2_type 4 386 -48 2290 70 0 0 chr2 235555053 235555397 -17701186 + AluY SINE Alu 1 344 0 371 310 76 29 chr2 235555802 235555973 -17700610 - MIR SINE MIR -44 218 40 286 316 26 52 chr2 235556232 235556324 -17700259 - L2 LINE L2 0 3313 3220 2309 138 11 8 chr2 235556324 235556687 -17699896 - THE1B LTR MaLR 0 364 1 286 316 26 52 chr2 235556687 235556787 -17699796 - L2 LINE L2 -93 3220 3126 519 268 8 0 chr2 235557015 235557138 -17699445 + L2 LINE L2 3187 3310 -3 432 296 66 66 chr2 235557250 235557507 -17699076 + LTR33A LTR ERVL 1 257 -266 710 250 131 48 chr2 235559178 235559767 -17696816 - L1MC5 LINE L1 -64 7897 7260 1041 259 19 107 chr2 235559899 235559983 -17696600 - L1MC4 LINE L1 -752 7209 7119 2125 75 0 0 chr2 235559983 235560237 -17696346 - AluY SINE Alu -18 293 40 1041 259 19 107 chr2 235560237 235560926 -17695657 - L1MC4 LINE L1 -842 7119 6499 266 239 62 69 chr2 235561457 235561587 -17694996 + LTR16A1 LTR ERVL 325 453 -4 2145 108 15 9 chr2 235561790 235562124 -17694459 - L1MA5A LINE L1 -1 6296 5961 2441 110 13 3 chr2 235562124 235562498 -17694085 + L1MA5A LINE L1 5650 6027 -270 23 0 0 0 chr2 235562567 235562590 -17693993 + AT_rich Low_complexity Low_complexity 1 23 0 1987 129 0 33 chr2 235562679 235562982 -17693601 - AluSx SINE Alu -19 293 1 750 28 9 19 chr2 235563266 235563373 -17693210 + (TCTA)n Simple_repeat Simple_repeat 1 106 0 1996 111 10 20 chr2 235563778 235564075 -17692508 - AluSg SINE Alu -15 295 2 369 270 20 0 chr2 235564550 235564650 -17691933 - MIR SINE MIR -16 246 145 596 195 130 19 chr2 235564650 235564804 -17691779 - L1ME1 LINE L1 -318 5848 5678 2058 236 198 53 chr2 235565114 235566133 -17690450 - L1ME LINE L1 -448 6513 5643 1915 99 0 4 chr2 235566133 235566385 -17690198 + AluSc SINE Alu 1 251 -58 2058 236 198 53 chr2 235566385 235567255 -17689328 - L1ME LINE L1 -1318 5643 4352 621 279 100 16 chr2 235567280 235567891 -17688692 - L1MCc LINE L1 -4914 1509 1244 682 318 87 3 chr2 235567894 235568183 -17688400 - L1MCc LINE L1 -5216 1207 895 469 272 13 62 chr2 235568326 235568550 -17688033 - L1MCc LINE L1 -6178 245 33 227 217 33 0 chr2 235568692 235568752 -17687831 + HAL1 LINE L1 2340 2401 -106 29 0 0 0 chr2 235568877 235568906 -17687677 + AT_rich Low_complexity Low_complexity 1 29 0 210 167 0 0 chr2 235569018 235569054 -17687529 + A-rich Low_complexity Low_complexity 1 36 0 370 0 0 0 chr2 235569204 235569248 -17687335 - L1PA6 LINE L1 -378 5777 5734 2813 52 0 0 chr2 235569248 235569597 -17686986 + L1PA6 LINE L1 5800 6148 -6 2300 95 7 0 chr2 235569657 235569961 -17686622 - AluSp SINE Alu -7 306 1 312 358 15 30 chr2 235569970 235570104 -17686479 - MIR3 SINE MIR -64 144 13 485 272 0 0 chr2 235570730 235570844 -17685739 - MER81 DNA DNA 0 114 1 2215 158 44 37 chr2 235570953 235571384 -17685199 + Tigger2a DNA MER2_type 1 434 0 1492 181 69 4 chr2 235571883 235572159 -17684424 + AluJb SINE Alu 1 294 -18 22 56 0 0 chr2 235573627 235573663 -17682920 + AT_rich Low_complexity Low_complexity 1 36 0 431 313 62 14 chr2 235573736 235574091 -17682492 - L1ME4a LINE L1 -153 5968 5597 378 0 0 0 chr2 235574102 235574144 -17682439 + (TG)n Simple_repeat Simple_repeat 1 42 0 491 262 158 42 chr2 235574156 235574492 -17682091 + MLT1L LTR MaLR 155 529 -86 1862 155 63 67 chr2 235574546 235574977 -17681606 + Charlie1b DNA MER1_type 35 466 -2295 2528 68 0 0 chr2 235574977 235575288 -17681295 + AluY SINE Alu 1 311 0 1862 155 63 67 chr2 235575288 235575312 -17681271 + Charlie1b DNA MER1_type 466 489 -2272 1991 154 58 0 chr2 235575312 235575657 -17680926 - MLT1A1 LTR MaLR 0 365 1 1862 155 63 67 chr2 235575657 235575691 -17680892 + Charlie1b DNA MER1_type 489 523 0 2458 90 0 0 chr2 235578078 235578389 -17678194 + AluY SINE Alu 1 311 0 2790 138 11 4 chr2 235578445 235578907 -17677676 - L1MA3 LINE L1 -106 6199 5735 429 20 0 0 chr2 235581317 235581367 -17675216 + (TG)n Simple_repeat Simple_repeat 1 50 0 182 303 115 16 chr2 235582477 235582599 -17673984 + L2 LINE L2 2389 2522 -792 1207 296 57 19 chr2 235582621 235583046 -17673537 + LTR16C LTR ERVL 46 486 -5 648 171 209 0 chr2 235583584 235583713 -17672870 - MER1B DNA MER1_type -141 156 1 317 221 0 0 chr2 235585049 235585117 -17671466 + MIR SINE MIR 149 216 -46 2132 75 0 4 chr2 235585168 235585433 -17671150 + AluY SINE Alu 1 264 -47 288 91 0 0 chr2 235585433 235585477 -17671106 + (TA)n Simple_repeat Simple_repeat 1 44 0 312 266 0 43 chr2 235585484 235585578 -17671005 - L1MC4 LINE L1 -1339 6703 6614 * 330 262 0 12 chr2 235585526 235585610 -17670973 + L1MC4 LINE L1 6614 6696 -1346 551 171 29 17 chr2 235586212 235586387 -17670196 + CT-rich Low_complexity Low_complexity 3 179 0 381 205 19 31 chr2 235586428 235586589 -17669994 + CT-rich Low_complexity Low_complexity 4 162 0 271 244 228 24 chr2 235587602 235587729 -17668854 - L2 LINE L2 -3 3269 3117 2258 112 6 6 chr2 235589035 235589347 -17667236 - AluSx SINE Alu 0 312 1 6243 94 16 26 chr2 235589357 235590788 -17665795 - L1PA8A LINE L1 0 6131 4711 13264 109 6 5 chr2 235590791 235592791 -17663792 + L1PA8A LINE L1 2737 4737 -1409 228 228 0 0 chr2 235593943 235594000 -17662583 + (CATATA)n Simple_repeat Simple_repeat 2 58 0 23 0 0 0 chr2 235594042 235594065 -17662518 + AT_rich Low_complexity Low_complexity 1 23 0 213 132 59 29 chr2 235594095 235594163 -17662420 + (TA)n Simple_repeat Simple_repeat 2 71 0 575 218 59 57 chr2 235594545 235594805 -17661778 - LTR53 LTR ERVL -12 507 194 1211 256 68 25 chr2 235595293 235595735 -17660848 - MLT1C LTR MaLR -4 463 3 2689 112 3 0 chr2 235596823 235597197 -17659386 - THE1C LTR MaLR 0 375 1 441 340 19 33 chr2 235597586 235597702 -17658881 + MIR SINE MIR 29 142 -120 825 115 71 39 chr2 235597702 235597884 -17658699 + MER53 DNA DNA 2 189 0 441 340 19 33 chr2 235597884 235597982 -17658601 + MIR SINE MIR 142 240 -22 7502 25 2 2 chr2 235598267 235599225 -17657358 + L1PA4 LINE L1 5190 6147 -8 445 264 7 14 chr2 235600608 235600748 -17655835 - Zaphod DNA AcHobo -6 4025 3887 2939 115 30 90 chr2 235600762 235601294 -17655289 - LTR3b LTR ERVK 0 500 1 406 219 52 0 chr2 235601309 235601405 -17655178 - Zaphod DNA AcHobo -174 3857 3757 552 324 36 52 chr2 235601409 235601664 -17654919 - LTR16B LTR ERVL -8 456 206 3770 98 0 4 chr2 235601664 235602177 -17654406 - MER9 LTR ERVK 0 511 1 552 324 36 52 chr2 235602177 235602251 -17654332 - LTR16B LTR ERVL -258 206 132 424 286 0 0 chr2 235603112 235603238 -17653345 + L1MC/D LINE L1 5318 5443 -890 1769 309 20 25 chr2 235603248 235603847 -17652736 + L1M3e LINE L1 466 1061 -6428 1410 206 15 23 chr2 235603837 235604189 -17652394 + L1M3e LINE L1 2252 2609 -4887 * 302 286 0 12 chr2 235604664 235604748 -17651835 + L1MC4 LINE L1 6614 6696 -1346 1756 166 34 10 chr2 235604866 235605162 -17651421 - AluSx SINE Alu -7 305 3 858 311 143 2 chr2 235606274 235606673 -17649910 + LTR16B LTR ERVL 3 457 -7 219 114 0 0 chr2 235607017 235607052 -17649531 + (CA)n Simple_repeat Simple_repeat 1 35 0 317 233 55 0 chr2 235607196 235607269 -17649314 + MIR SINE MIR 109 185 -77 186 118 0 0 chr2 235607316 235607350 -17649233 + (TTA)n Simple_repeat Simple_repeat 2 35 0 2044 154 89 5 chr2 235607998 235608393 -17648190 - MSTA LTR MaLR 0 428 1 23 0 0 0 chr2 235608995 235609018 -17647565 + AT_rich Low_complexity Low_complexity 1 23 0 39 0 0 0 chr2 235609861 235609900 -17646683 + AT_rich Low_complexity Low_complexity 1 39 0 2439 87 0 0 chr2 235610206 235610515 -17646068 - AluSg SINE Alu -1 309 1 359 331 88 6 chr2 235610646 235610806 -17645777 + MIR3 SINE MIR 12 184 -24 1323 225 60 3 chr2 235611253 235611418 -17645165 - AluJo SINE Alu -12 300 111 233 56 0 28 chr2 235611418 235611454 -17645129 + (TA)n Simple_repeat Simple_repeat 1 35 0 1323 225 60 3 chr2 235611454 235611572 -17645011 - AluJo SINE Alu -201 111 1 227 194 75 15 chr2 235613474 235613541 -17643042 + L1PA15-16 LINE L1 2560 2630 -4219 3417 84 2 0 chr2 235613597 235614060 -17642523 - L1PA8A LINE L1 -414 5717 5254 2928 75 2 19 chr2 235614071 235614485 -17642098 + L1PA8 LINE L1 5764 6170 -2 1766 95 0 58 chr2 235614488 235614817 -17641766 + L1PA10 LINE L1 5891 6203 0 949 256 18 30 chr2 235614817 235614998 -17641585 + L1M3e LINE L1 2920 3097 -4468 3351 107 8 19 chr2 235614998 235615513 -17641070 - MER75 DNA T2_type -2 512 4 949 256 18 30 chr2 235615513 235615667 -17640916 + L1M3e LINE L1 3097 3251 -4314 411 180 18 18 chr2 235615679 235615790 -17640793 + L1M3e LINE L1 3356 3466 -4099 1642 123 0 33 chr2 235615897 235616173 -17640410 + AluY SINE Alu 38 304 -7 2550 51 0 13 chr2 235616838 235617151 -17639432 - AluY SINE Alu 0 311 3 330 354 9 0 chr2 235617636 235617749 -17638834 + L2 LINE L2 3155 3268 -4 3290 221 42 22 chr2 235617882 235619518 -17637065 - L1MC3 LINE L1 -743 5403 4377 1811 153 7 20 chr2 235619518 235619812 -17636771 - AluJb SINE Alu -22 290 1 3290 221 42 22 chr2 235619812 235619917 -17636666 - L1MC3 LINE L1 -1769 4377 4276 251 265 72 0 chr2 235620144 235620227 -17636356 + MIR SINE MIR 118 206 -56 2381 190 29 33 chr2 235620228 235620744 -17635839 + MLT2B2 LTR ERVL 2 515 0 22 0 0 0 chr2 235620962 235620984 -17635599 + AT_rich Low_complexity Low_complexity 1 22 0 1825 153 26 34 chr2 235621116 235621468 -17635115 - THE1B LTR MaLR 0 364 16 2146 112 0 3 chr2 235623177 235623464 -17633119 - AluSp SINE Alu -27 286 1 180 0 0 0 chr2 235624120 235624140 -17632443 + (CTG)n Simple_repeat Simple_repeat 1 20 0 949 283 55 33 chr2 235625385 235625766 -17630817 - ERVL LTR ERVL -1922 3074 2808 408 331 79 20 chr2 235625765 235626070 -17630513 - ERVL LTR ERVL -3859 1905 1583 * 11785 187 42 11 chr2 235626373 235628342 -17628241 + L1M3e LINE L1 3809 5878 -1687 2297 119 0 0 chr2 235628342 235628652 -17627931 + AluSx SINE Alu 2 311 -1 11785 187 42 11 chr2 235628652 235629253 -17627330 + L1M3e LINE L1 5878 6459 -1106 931 214 0 52 chr2 235629239 235629491 -17627092 - L1M4 LINE L1 -1051 5095 4857 * 2143 273 82 18 chr2 235629506 235630267 -17626316 + L2 LINE L2 1862 2670 -644 747 243 90 60 chr2 235630413 235630747 -17625836 + MLT1H LTR MaLR 206 549 0 1044 287 98 19 chr2 235630747 235631334 -17625249 + L2 LINE L2 2674 3313 0 291 113 0 0 chr2 235631441 235631494 -17625089 + (TG)n Simple_repeat Simple_repeat 2 54 0 234 91 0 0 chr2 235632282 235632315 -17624268 + (TTCA)n Simple_repeat Simple_repeat 4 36 0 251 390 41 8 chr2 235632317 235632440 -17624143 - L2 LINE L2 -12 3260 3134 21 36 0 0 chr2 235633606 235633634 -17622949 + AT_rich Low_complexity Low_complexity 1 28 0 389 149 0 0 chr2 235634319 235634386 -17622197 - MLT1K LTR MaLR 0 588 522 282 103 59 0 chr2 235634387 235634455 -17622128 + A-rich Low_complexity Low_complexity 4 75 0 1191 81 12 0 chr2 235634534 235634694 -17621889 + AluY SINE Alu 1 162 -149 750 297 27 36 chr2 235685399 235685732 -17570851 + LTR16B LTR ERVL 135 464 0 310 283 94 0 chr2 235686698 235686836 -17569747 + MIR SINE MIR 57 207 -55 2612 98 154 139 chr2 235686849 235687584 -17568999 - pTR5 LTR ERV1 0 2438 1693 1076 226 62 50 chr2 235688624 235689044 -17567539 + Charlie4a DNA MER1_type 3 427 -81 283 279 32 101 chr2 235689105 235689263 -17567320 + MER96 DNA MER1_type? 29 175 0 1258 284 72 2 chr2 235689725 235690144 -17566439 + MLT1E2 LTR MaLR 168 615 -11 277 315 107 5 chr2 235690571 235690768 -17565815 - ERVL LTR ERVL -3919 1845 1629 398 376 24 26 chr2 235690985 235691411 -17565172 - ERVL LTR ERVL -4248 1516 1092 391 343 81 17 chr2 235691735 235692079 -17564504 - ERVL LTR ERVL -5061 703 338 776 283 60 37 chr2 235692351 235692704 -17563879 + LTR16C LTR ERVL 122 482 -9 3428 82 9 0 chr2 235692799 235693248 -17563335 + MLT2A2 LTR ERVL 1 453 0 241 391 94 13 chr2 235693759 235694058 -17562525 - L2 LINE L2 -505 2809 2487 1956 165 34 24 chr2 235694309 235694807 -17561776 - pTR5 LTR ERV1 -1193 1245 743 361 290 172 12 chr2 235695208 235695377 -17561206 + L3 LINE CR1 1219 1414 -163 184 287 97 72 chr2 235695709 235695946 -17560637 - L2 LINE L2 -48 3265 3023 365 86 17 0 chr2 235695987 235696045 -17560538 + (TAGA)n Simple_repeat Simple_repeat 2 60 0 1632 234 68 62 chr2 235696414 235696574 -17560009 - L1MC4 LINE L1 -149 7893 7735 1918 132 45 0 chr2 235696574 235696861 -17559722 + AluSx SINE Alu 1 300 -12 1632 234 68 62 chr2 235696861 235697410 -17559173 - L1MC4 LINE L1 -307 7735 7180 195 369 0 0 chr2 235697870 235697935 -17558648 - MIR SINE MIR 0 262 198 3702 92 0 0 chr2 235698153 235698653 -17557930 - L1PA7 LINE L1 -7 6147 5648 495 265 43 31 chr2 235699320 235699482 -17557101 - MIR SINE MIR -55 207 44 234 0 0 0 chr2 235699517 235699543 -17557040 + (TG)n Simple_repeat Simple_repeat 2 27 0 235 283 17 0 chr2 235699660 235699720 -17556863 + CT-rich Low_complexity Low_complexity 3 63 0 239 329 168 0 chr2 235699779 235699916 -17556667 + MIR SINE MIR 12 171 -91 334 205 3 0 chr2 235701392 235701469 -17555114 + MLT1E3 LTR MaLR 538 614 -10 2557 129 16 28 chr2 235701667 235702100 -17554483 - MSTA LTR MaLR 0 428 1 15589 161 37 29 chr2 235702147 235705309 -17551274 + L1M1 LINE L1 22 3207 -4358 5959 163 35 8 chr2 235705490 235706672 -17549911 - Tigger3b DNA MER2_type -14 1217 4 551 273 14 7 chr2 235708026 235708165 -17548418 + MER5A DNA MER1_type 47 186 -3 210 360 40 0 chr2 235710584 235710659 -17545924 + MIR SINE MIR 17 94 -114 585 286 77 32 chr2 235710674 235711013 -17545570 + MLT1H1 LTR MaLR 14 367 -188 299 355 8 24 chr2 235711181 235711305 -17545278 + MIR SINE MIR 87 208 -54 232 343 0 29 chr2 235711615 235711717 -17544866 + L1MCc LINE L1 399 497 -5926 586 291 98 71 chr2 235711801 235712431 -17544152 + L1MCc LINE L1 656 1302 -5121 1173 235 106 26 chr2 235712455 235712872 -17543711 + L1ME LINE L1 5318 5767 -399 1063 102 30 18 chr2 235712897 235713064 -17543519 + THE1B LTR MaLR 1 169 -195 1439 205 51 8 chr2 235713932 235714302 -17542281 - L1MD3 LINE L1 -883 7112 6727 408 213 0 0 chr2 235714295 235714389 -17542194 - L1MEc LINE L1 -4647 1749 1656 * 719 276 65 74 chr2 235714390 235714836 -17541747 - L1MEc LINE L1 -5915 481 40 23 0 0 0 chr2 235715523 235715546 -17541037 + AT_rich Low_complexity Low_complexity 1 23 0 1407 203 60 29 chr2 235715631 235715981 -17540602 + MLT1A1 LTR MaLR 5 365 0 1648 159 37 11 chr2 235716241 235716511 -17540072 + AluSx SINE Alu 1 277 -35 188 323 40 40 chr2 235716574 235716673 -17539910 - MIR SINE MIR -118 144 46 745 254 77 30 chr2 235716734 235717096 -17539487 + LTR16A LTR ERVL 62 440 -10 1677 288 85 21 chr2 235717106 235717949 -17538634 + HERV16 LTR ERVL 3 899 -4097 319 278 53 37 chr2 235717966 235718153 -17538430 - LTR16A LTR ERVL -199 251 62 188 323 40 40 chr2 235718214 235718313 -17538270 + MIR SINE MIR 46 144 -118 309 167 152 0 chr2 235718376 235718442 -17538141 - AluY SINE Alu -25 276 201 1413 333 42 3 chr2 235718472 235719087 -17537496 + HERV16 LTR ERVL 937 1575 -3421 416 348 29 14 chr2 235719156 235719366 -17537217 + HERVL LTR ERVL 4184 4396 -1258 1120 165 14 170 chr2 235720698 235721086 -17535497 - MLT1A1 LTR MaLR -1 364 48 2058 135 23 0 chr2 235721086 235721390 -17535193 - AluSx SINE Alu -1 311 1 1120 165 14 170 chr2 235721390 235721431 -17535152 - MLT1A1 LTR MaLR -317 48 2 180 322 67 22 chr2 235723306 235723396 -17533187 + L2 LINE L2 2695 2788 -526 2344 160 5 0 chr2 235723490 235723889 -17532694 - Tigger3(Golem) DNA MER2_type -17 3012 2612 406 211 0 0 chr2 235723876 235723952 -17532631 - Tigger3(Golem) DNA MER2_type -2952 77 2 * 414 237 155 107 chr2 235723955 235724368 -17532215 + MLT1H LTR MaLR 74 506 -49 965 172 32 39 chr2 235724588 235724867 -17531716 - MER33 DNA MER1_type 0 324 48 553 123 0 0 chr2 235724913 235724994 -17531589 + FLAM_C SINE Alu 24 104 -39 225 0 0 0 chr2 235725001 235725026 -17531557 + (TC)n Simple_repeat Simple_repeat 2 26 0 640 58 74 0 chr2 235725027 235725234 -17531349 + (TA)n Simple_repeat Simple_repeat 1 222 0 480 72 87 0 chr2 235725684 235725822 -17530761 + (TA)n Simple_repeat Simple_repeat 1 150 0 24 0 0 0 chr2 235725836 235725860 -17530723 + AT_rich Low_complexity Low_complexity 1 24 0 398 288 38 0 chr2 235725991 235726123 -17530460 + MLT1J2 LTR MaLR 74 210 -240 360 0 0 0 chr2 235727093 235727133 -17529450 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 274 390 7 0 chr2 235727817 235727958 -17528625 + L2 LINE L2 2507 2648 -666 1196 196 128 22 chr2 235727962 235728274 -17528309 - MER2 DNA MER2_type 0 345 1 188 383 67 8 chr2 235728279 235728399 -17528184 + L2 LINE L2 2657 2783 -531 258 194 0 0 chr2 235729159 235729231 -17527352 + (TCTA)n Simple_repeat Simple_repeat 1 72 0 1237 264 18 13 chr2 235729722 235730173 -17526410 + L1M4 LINE L1 4803 5255 -891 * 1654 199 11 3 chr2 235730163 235730593 -17525990 + L1MC/D LINE L1 5175 5609 -750 442 284 83 30 chr2 235731574 235731743 -17524840 - MER5B DNA MER1_type 0 178 1 311 123 35 0 chr2 235733438 235733495 -17523088 + CT-rich Low_complexity Low_complexity 4 62 0 2256 98 23 0 chr2 235733503 235733809 -17522774 - AluSq SINE Alu 0 313 1 276 111 0 0 chr2 235734540 235734585 -17521998 + (TC)n Simple_repeat Simple_repeat 1 45 0 1422 169 89 96 chr2 235737155 235737594 -17518989 - L1ME2 LINE L1 -2 6162 5727 984 230 28 40 chr2 235737602 235737943 -17518640 - L1P5 LINE L1 -573 5578 5240 572 200 7 30 chr2 235738248 235738383 -17518200 + L1MA10 LINE L1 6203 6334 0 408 291 121 16 chr2 235738449 235738631 -17517952 - MIR SINE MIR -50 212 12 360 180 295 8 chr2 235738979 235739101 -17517482 - L1MC4a LINE L1 -967 6841 6685 217 313 89 84 chr2 235739112 235739326 -17517257 - L2 LINE L2 -649 2665 2451 32 67 0 0 chr2 235739959 235740019 -17516564 + AT_rich Low_complexity Low_complexity 1 60 0 463 324 67 25 chr2 235740527 235740765 -17515818 + MIR SINE MIR 15 262 0 504 323 58 18 chr2 235740770 235740996 -17515587 - MIR SINE MIR 0 262 28 452 228 32 10 chr2 235741315 235741438 -17515145 + MLT1E1 LTR MaLR 459 637 -8 528 298 46 9 chr2 235741985 235742358 -17514225 - MLT1C LTR MaLR 0 467 53 429 299 98 18 chr2 235742930 235743094 -17513489 + MLT1J2 LTR MaLR 273 449 -1 224 335 99 61 chr2 235743354 235743617 -17512966 + L2 LINE L2 2811 3083 -189 626 305 126 25 chr2 235743689 235744053 -17512530 + L2 LINE L2 2048 2448 -866 459 238 81 24 chr2 235744057 235744267 -17512316 + HAL1 LINE L1 1097 1318 -1189 228 188 109 47 chr2 235744295 235744359 -17512224 - MLT1J LTR MaLR -308 203 136 395 351 53 64 chr2 235744724 235745322 -17511261 + L2 LINE L2 2696 3296 -17 188 409 49 0 chr2 235745497 235745639 -17510944 - L2 LINE L2 -249 3023 2875 309 315 16 24 chr2 235746198 235746325 -17510258 + MIR SINE MIR 84 209 -53 2007 118 9 59 chr2 235746856 235747179 -17509404 - AluSx SINE Alu -5 307 1 21 110 0 0 chr2 235747941 235748032 -17508551 + AT_rich Low_complexity Low_complexity 1 91 0 508 256 8 30 chr2 235748191 235748324 -17508259 - MIR SINE MIR -25 237 108 227 378 20 0 chr2 235748475 235748573 -17508010 + L2 LINE L2 3171 3270 -2 2069 119 4 0 chr2 235750291 235750568 -17506015 + AluSc SINE Alu 1 278 -31 191 36 36 0 chr2 235750571 235750599 -17505984 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 209 315 41 14 chr2 235750616 235750689 -17505894 - L2 LINE L2 -2 3270 3196 222 374 19 19 chr2 235751303 235751410 -17505173 + L2 LINE L2 3116 3222 -50 303 265 0 0 chr2 235751734 235751836 -17504747 + (TA)n Simple_repeat Simple_repeat 2 103 0 3530 124 4 0 chr2 235752398 235752931 -17503652 - L1PA15 LINE L1 -4 6161 5627 1569 213 3 7 chr2 235753156 235753456 -17503127 + AluJo SINE Alu 1 299 -13 1312 211 115 98 chr2 235753469 235753615 -17502968 + MLT1E3 LTR MaLR 1 143 -481 2220 109 0 7 chr2 235753615 235753917 -17502666 + AluSx SINE Alu 1 300 -12 180 0 0 0 chr2 235753917 235753937 -17502646 + (TA)n Simple_repeat Simple_repeat 2 21 0 1312 211 115 98 chr2 235753937 235754323 -17502260 + MLT1E3 LTR MaLR 143 548 -76 2701 52 6 0 chr2 235754323 235754666 -17501917 + L1PA4 LINE L1 5811 6155 0 1312 211 115 98 chr2 235754666 235754742 -17501841 + MLT1E3 LTR MaLR 548 621 -3 515 107 12 0 chr2 235754798 235754882 -17501701 + (TTTC)n Simple_repeat Simple_repeat 4 88 0 890 123 0 0 chr2 235755109 235755231 -17501352 - AluSg/x SINE Alu -27 283 162 1261 162 40 130 chr2 235755679 235756080 -17500503 - MLT1A1 LTR MaLR 0 365 1 2502 43 10 0 chr2 235756119 235756421 -17500162 - AluY SINE Alu -6 305 1 268 143 54 18 chr2 235756628 235756684 -17499899 - L2 LINE L2 -8 3305 3248 523 274 91 16 chr2 235757593 235757779 -17498804 - MIR SINE MIR -37 225 26 29 0 0 0 chr2 235757862 235757891 -17498692 + AT_rich Low_complexity Low_complexity 1 29 0 300 213 133 0 chr2 235758748 235758823 -17497760 + MER94 DNA DNA 2 86 -48 2378 116 31 3 chr2 235760057 235760411 -17496172 - THE1B LTR MaLR 0 364 1 309 282 74 7 chr2 235760411 235760560 -17496023 + L1ME1 LINE L1 5622 5780 -341 306 205 36 12 chr2 235760870 235760953 -17495630 + L1ME4a LINE L1 6037 6121 0 3866 92 7 2 chr2 235760973 235761515 -17495068 - L1PA10 LINE L1 -3 6165 5621 258 254 51 0 chr2 235761730 235761789 -17494794 + L2 LINE L2 3184 3245 -27 26 82 0 0 chr2 235762030 235762091 -17494492 + AT_rich Low_complexity Low_complexity 1 61 0 1993 139 0 0 chr2 235762376 235762656 -17493927 - AluSx SINE Alu -27 285 6 26 30 0 0 chr2 235762665 235762698 -17493885 + AT_rich Low_complexity Low_complexity 1 33 0 378 354 45 25 chr2 235766502 235766745 -17489838 + MIR SINE MIR 14 261 -1 985 265 62 10 chr2 235766818 235767124 -17489459 + L1ME1 LINE L1 5842 6163 -3 14919 164 16 12 chr2 235767637 235770922 -17485661 + L1MA1 LINE L1 2376 5678 -624 2377 62 0 37 chr2 235770922 235771243 -17485340 + AluY SINE Alu 1 309 -2 14919 164 16 12 chr2 235771243 235771871 -17484712 + L1MA1 LINE L1 5678 6302 0 559 340 32 12 chr2 235772286 235772539 -17484044 + MIR SINE MIR 4 261 -1 11691 24 0 7 chr2 235772772 235774933 -17481650 - L1PA3 LINE L1 0 6155 4005 301 365 81 0 chr2 235775780 235775928 -17480655 + MIR3 SINE MIR 18 177 -31 2240 110 27 21 chr2 235776010 235776383 -17480200 - THE1C LTR MaLR 0 375 1 400 288 17 25 chr2 235777580 235777698 -17478885 + LTR16C LTR ERVL 150 266 -225 624 179 80 6 chr2 235777873 235778035 -17478548 + L1MA7 LINE L1 6112 6285 -6 1906 96 44 0 chr2 235778372 235778622 -17477961 + AluSp SINE Alu 1 261 -52 2289 124 13 26 chr2 235780383 235780763 -17475820 + THE1C LTR MaLR 1 375 0 264 200 0 0 chr2 235780814 235780874 -17475709 + (TA)n Simple_repeat Simple_repeat 2 61 0 1247 211 7 37 chr2 235780877 235781147 -17475436 - AluJo SINE Alu -35 277 16 354 61 0 0 chr2 235781902 235781951 -17474632 + (CA)n Simple_repeat Simple_repeat 2 50 0 233 303 76 38 chr2 235782739 235782871 -17473712 - L1MC/D LINE L1 -2217 5591 5455 622 319 109 4 chr2 235783005 235783271 -17473312 - LTR16C LTR ERVL -9 482 189 282 286 51 0 chr2 235783301 235783399 -17473184 - LTR16C LTR ERVL -374 117 15 811 157 0 0 chr2 235783549 235783664 -17472919 - FLAM_C SINE Alu -28 115 1 22 103 0 0 chr2 235783890 235783968 -17472615 + AT_rich Low_complexity Low_complexity 1 78 0 499 140 0 32 chr2 235784918 235785011 -17471572 - FLAM_A SINE Alu -7 135 46 720 186 8 8 chr2 235784926 235785055 -17471528 - FLAM_A SINE Alu -4 129 1 1299 210 77 23 chr2 235786096 235786406 -17470177 + MLT1A1 LTR MaLR 1 327 -38 579 256 104 6 chr2 235786451 235786615 -17469968 + MER63A DNA MER1_type 1 180 -30 250 315 137 72 chr2 235787797 235788244 -17468339 + L2 LINE L2 2201 2676 -638 2040 136 10 0 chr2 235788315 235788617 -17467966 + AluSq SINE Alu 3 307 -6 253 352 67 58 chr2 235788631 235789013 -17467570 + L2 LINE L2 2815 3203 -69 2226 104 0 7 chr2 235789013 235789311 -17467272 + AluSq SINE Alu 1 296 -17 253 352 67 58 chr2 235789311 235789374 -17467209 + L2 LINE L2 3203 3264 -8 296 47 0 23 chr2 235789513 235789556 -17467027 + (GGAA)n Simple_repeat Simple_repeat 4 45 0 196 256 203 38 chr2 235791116 235791249 -17465334 - L2 LINE L2 -16 3297 3143 21 0 0 0 chr2 235791439 235791460 -17465123 + AT_rich Low_complexity Low_complexity 1 21 0 1781 151 14 0 chr2 235791462 235791740 -17464843 - AluJb SINE Alu -27 285 4 227 309 72 10 chr2 235792848 235792945 -17463638 + MIR SINE MIR 18 120 -142 3574 169 101 29 chr2 235793166 235793936 -17462647 + LTR1B LTR ERV1 1 826 0 253 303 10 30 chr2 235793938 235794037 -17462546 - MIR SINE MIR -28 234 138 1827 145 32 56 chr2 235794659 235794839 -17461744 + THE1B LTR MaLR 1 169 -195 2157 118 3 7 chr2 235794839 235795144 -17461439 + AluSc SINE Alu 1 304 -5 1827 145 32 56 chr2 235795144 235795336 -17461247 + THE1B LTR MaLR 169 364 0 1337 287 42 23 chr2 235795694 235796171 -17460412 - LTR16C LTR ERVL -1 490 5 35 71 0 0 chr2 235799106 235799176 -17457407 + AT_rich Low_complexity Low_complexity 1 70 0 701 250 136 4 chr2 235799717 235799997 -17456586 - LTR37A LTR ERV1 -26 400 84 281 263 196 40 chr2 235800092 235800316 -17456267 - MIR SINE MIR -3 259 1 24 32 0 0 chr2 235800738 235800769 -17455814 + AT_rich Low_complexity Low_complexity 1 31 0 1458 212 145 19 chr2 235800875 235802088 -17454495 + Charlie1a DNA MER1_type 1 1455 0 209 304 18 0 chr2 235802132 235802188 -17454395 - L2 LINE L2 -76 3237 3181 * 232 284 110 65 chr2 235802160 235802315 -17454268 - L2 LINE L2 -889 2425 2264 190 243 0 0 chr2 235802741 235802778 -17453805 + L2 LINE L2 1866 1902 -1412 2180 98 0 0 chr2 235802815 235803102 -17453481 - AluSg SINE Alu -14 296 10 275 308 54 23 chr2 235803829 235803959 -17452624 - MARNA DNA Mariner -392 194 61 243 88 0 0 chr2 235805152 235805186 -17451397 + (TG)n Simple_repeat Simple_repeat 2 35 0 22 35 0 0 chr2 235805965 235805994 -17450589 + AT_rich Low_complexity Low_complexity 1 29 0 296 310 43 0 chr2 235807120 235807236 -17449347 - MLT1L LTR MaLR -74 541 421 2252 233 66 23 chr2 235807389 235808268 -17448315 - L1ME1 LINE L1 -116 6050 5132 590 177 0 0 chr2 235808269 235808365 -17448218 + MLT1B LTR MaLR 295 390 0 495 211 0 86 chr2 235808365 235808517 -17448066 - L1ME1 LINE L1 -1213 4933 4795 407 133 93 0 chr2 235808531 235808606 -17447977 - MER66B LTR ERV1 0 486 405 4191 264 97 20 chr2 235808606 235810520 -17446063 - L1ME1 LINE L1 -1612 4534 2475 522 238 119 9 chr2 235810578 235810805 -17445778 - L1MB7 LINE L1 -31 6153 5902 22 0 0 0 chr2 235810886 235810908 -17445675 + AT_rich Low_complexity Low_complexity 1 22 0 307 214 126 58 chr2 235811440 235811543 -17445040 + L1MC/D LINE L1 5353 5462 -897 22 0 0 0 chr2 235811990 235812012 -17444571 + AT_rich Low_complexity Low_complexity 1 22 0 1331 231 41 6 chr2 235812013 235812481 -17444102 - L1MB7 LINE L1 -720 5446 4961 1016 136 4 8 chr2 235812483 235812719 -17443864 - L1PA16 LINE L1 -3 6163 5874 489 123 0 25 chr2 235812720 235812801 -17443782 + L1P4 LINE L1 5745 5823 -343 1005 223 102 0 chr2 235812812 235813048 -17443535 - L1MB7 LINE L1 -1221 4925 4714 752 31 0 10 chr2 235813048 235813144 -17443439 + (TTTC)n Simple_repeat Simple_repeat 2 96 0 2136 110 0 7 chr2 235813145 235813427 -17443156 - AluSx SINE Alu -32 280 1 1005 223 102 0 chr2 235813427 235813493 -17443090 - L1MB7 LINE L1 -1431 4715 4590 2662 216 70 15 chr2 235813494 235813692 -17442891 + L1ME1 LINE L1 5448 5634 -532 2198 123 48 31 chr2 235813692 235814050 -17442533 + THE1B LTR MaLR 1 364 0 2662 216 70 15 chr2 235814050 235814527 -17442056 + L1ME1 LINE L1 5634 6160 -6 369 253 93 16 chr2 235816684 235816866 -17439717 - MER113 DNA MER1_type? -298 223 28 2049 138 35 24 chr2 235818373 235818744 -17437839 + THE1C LTR MaLR 1 375 0 549 208 42 71 chr2 235818870 235819038 -17437545 + MER5A DNA MER1_type 27 189 0 289 164 0 33 chr2 235819054 235819115 -17437468 + MER63 DNA MER1_type 793 851 -210 244 60 43 78 chr2 235819124 235819240 -17437343 + (TA)n Simple_repeat Simple_repeat 1 112 0 425 100 17 72 chr2 235819286 235819466 -17437117 + (TA)n Simple_repeat Simple_repeat 1 170 0 260 189 33 44 chr2 235820008 235820098 -17436485 + (TATAA)n Simple_repeat Simple_repeat 4 92 0 423 193 17 8 chr2 235820117 235820236 -17436347 + (TA)n Simple_repeat Simple_repeat 1 120 0 225 213 21 11 chr2 235820259 235820353 -17436230 + (TATATG)n Simple_repeat Simple_repeat 2 96 0 350 281 22 17 chr2 235820358 235820536 -17436047 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 342 276 8 63 chr2 235820756 235820883 -17435700 + MIR SINE MIR 140 259 -3 221 160 0 20 chr2 235821121 235821171 -17435412 + GA-rich Low_complexity Low_complexity 2 50 0 2245 104 0 13 chr2 235821587 235821915 -17434668 + AluSq SINE Alu 1 313 0 1067 252 8 8 chr2 235822052 235822314 -17434269 - MLT2C1 LTR ERVL -135 262 1 10483 96 14 21 chr2 235822659 235823970 -17432613 + THE1B-int LTR MaLR 88 1389 -191 2261 125 3 0 chr2 235823970 235824274 -17432309 - AluSx SINE Alu -7 305 1 10483 96 14 21 chr2 235824274 235824459 -17432124 + THE1B-int LTR MaLR 1389 1574 -6 2257 128 8 27 chr2 235824459 235824825 -17431758 + THE1B LTR MaLR 6 364 0 1078 239 61 16 chr2 235824836 235825146 -17431437 + L1ME1 LINE L1 5838 6161 -5 3654 187 100 98 chr2 235826138 235827162 -17429421 + Charlie1a DNA MER1_type 1 1030 -1731 2127 142 0 0 chr2 235827162 235827465 -17429118 + AluSx SINE Alu 4 306 -6 3654 187 100 98 chr2 235827465 235827892 -17428691 + Charlie1a DNA MER1_type 1030 1455 0 724 105 45 30 chr2 235828513 235828668 -17427915 + AluSg/x SINE Alu 168 312 0 23 0 0 0 chr2 235831885 235831908 -17424675 + AT_rich Low_complexity Low_complexity 1 23 0 1490 213 99 58 chr2 235831962 235832446 -17424137 + MLT1D LTR MaLR 2 505 0 301 269 39 26 chr2 235832566 235832644 -17423939 + MER2 DNA MER2_type 267 345 0 2211 70 13 30 chr2 235832717 235833015 -17423568 - AluY SINE Alu -18 293 1 2066 193 42 54 chr2 235833185 235833688 -17422895 + MLT1D LTR MaLR 1 497 -8 22 0 0 0 chr2 235833789 235833811 -17422772 + AT_rich Low_complexity Low_complexity 1 22 0 1928 153 0 7 chr2 235834950 235835232 -17421351 + AluSx SINE Alu 4 283 -29 187 43 0 0 chr2 235835232 235835255 -17421328 + (TAA)n Simple_repeat Simple_repeat 2 180 0 2091 128 0 0 chr2 235835255 235835536 -17421047 + AluSx SINE Alu 2 282 -30 904 174 5 5 chr2 235835539 235835740 -17420843 - L1MA7 LINE L1 -10 6281 6081 26 0 0 0 chr2 235835909 235835935 -17420648 + AT_rich Low_complexity Low_complexity 1 26 0 241 125 0 0 chr2 235837653 235837685 -17418898 - Tigger1 DNA MER2_type 0 2418 2387 2331 122 63 57 chr2 235837705 235837810 -17418773 + MSTA LTR MaLR 1 104 -324 2323 174 14 9 chr2 235837810 235838241 -17418342 - MER57B LTR ERV1 -1 433 1 2331 122 63 57 chr2 235838241 235838560 -17418023 + MSTA LTR MaLR 104 428 0 4732 166 23 10 chr2 235838560 235839381 -17417202 + MSTA-int LTR MaLR 1 832 -819 229 365 61 7 chr2 235839484 235839632 -17416951 + L2 LINE L2 3158 3313 0 284 287 0 0 chr2 235841526 235841613 -17414970 - L1MC4 LINE L1 -1342 6700 6614 1814 90 0 12 chr2 235841842 235842086 -17414497 - AluSq SINE Alu -13 300 60 393 228 43 0 chr2 235842101 235842193 -17414390 - MIR SINE MIR -156 106 11 602 221 162 7 chr2 235842224 235842378 -17414205 - MER5A DNA MER1_type -3 186 9 227 268 93 52 chr2 235842531 235842628 -17413955 + MIR3 SINE MIR 63 163 -45 315 104 0 0 chr2 235842632 235842680 -17413903 + (CAT)n Simple_repeat Simple_repeat 2 49 0 207 308 90 0 chr2 235842723 235842801 -17413782 - MIR SINE MIR -21 241 157 9567 27 0 0 chr2 235842873 235844009 -17412574 - L1PA3 LINE L1 -927 5219 4084 7747 24 0 0 chr2 235844009 235844936 -17411647 + L1PA3 LINE L1 5229 6155 0 259 330 55 0 chr2 235845070 235845179 -17411404 + MIR SINE MIR 100 214 -48 186 341 22 33 chr2 235846252 235846343 -17410240 - L2 LINE L2 -235 3037 2948 2141 87 18 0 chr2 235846803 235847129 -17409454 - AluSg SINE Alu 0 331 1 24 0 0 0 chr2 235848014 235848038 -17408545 + AT_rich Low_complexity Low_complexity 1 24 0 4899 167 32 9 chr2 235848517 235849413 -17407170 - MER49 LTR ERV1 -2 921 5 2763 122 21 2 chr2 235849473 235849892 -17406691 - MSTA LTR MaLR 0 428 2 427 248 131 7 chr2 235850075 235850228 -17406355 - MIR SINE MIR -10 252 81 454 293 78 59 chr2 235851091 235851347 -17405236 + MLT1K LTR MaLR 315 575 -13 798 199 11 11 chr2 235851597 235851773 -17404810 - MER5B DNA MER1_type 0 178 3 294 29 0 0 chr2 235852050 235852085 -17404498 + (TA)n Simple_repeat Simple_repeat 2 36 0 4749 38 9 2 chr2 235852086 235852670 -17403913 - L1PA5 LINE L1 -11 6143 5556 29 28 0 0 chr2 235853216 235853252 -17403331 + AT_rich Low_complexity Low_complexity 1 36 0 329 128 73 43 chr2 235853252 235853416 -17403167 + (TATAG)n Simple_repeat Simple_repeat 2 170 0 2127 94 0 17 chr2 235854442 235854740 -17401843 - AluY SINE Alu -18 293 1 221 188 21 0 chr2 235854780 235854828 -17401755 + (TTCA)n Simple_repeat Simple_repeat 2 50 0 21 89 0 0 chr2 235855644 235855700 -17400883 + AT_rich Low_complexity Low_complexity 1 56 0 315 183 0 0 chr2 235856706 235856766 -17399817 + Charlie5 DNA MER1_type 35 94 -2518 261 250 0 0 chr2 235856765 235856821 -17399762 - MER3 DNA MER1_type -153 56 1 * 1194 190 83 125 chr2 235857177 235857551 -17399032 + MLT2B1 LTR ERVL 1 356 -58 221 57 29 0 chr2 235857551 235857586 -17398997 + (TCTA)n Simple_repeat Simple_repeat 3 38 0 1194 190 83 125 chr2 235857586 235857643 -17398940 + MLT2B1 LTR ERVL 356 414 0 5598 227 69 40 chr2 235857644 235859126 -17397457 + ERVL-B1 LTR ERVL 2 1526 -4238 464 323 48 24 chr2 235860052 235860343 -17396240 + L1MC4a LINE L1 5631 5928 -1880 210 98 0 49 chr2 235861115 235861156 -17395427 + (GAAAA)n Simple_repeat Simple_repeat 5 43 0 1166 241 31 57 chr2 235862189 235862613 -17393970 - L1MC4 LINE L1 -17 8025 7613 1369 218 55 6 chr2 235862718 235863044 -17393539 - L1MC4 LINE L1 -410 7632 7291 349 301 62 7 chr2 235863045 235863191 -17393392 - L1M4 LINE L1 -3863 2283 2130 231 173 0 0 chr2 235863371 235863423 -17393160 + (TG)n Simple_repeat Simple_repeat 1 52 0 2163 264 41 41 chr2 235864087 235864917 -17391666 - L1ME2 LINE L1 -1 6097 5268 294 29 0 0 chr2 235864919 235864954 -17391629 + (TG)n Simple_repeat Simple_repeat 2 36 0 1987 175 11 8 chr2 235864960 235865338 -17391245 - L1PB3 LINE L1 -2 6152 5774 252 0 0 0 chr2 235865346 235865374 -17391209 + (T)n Simple_repeat Simple_repeat 1 28 0 25 0 0 0 chr2 235866327 235866352 -17390231 + AT_rich Low_complexity Low_complexity 1 25 0 216 0 0 0 chr2 235866388 235866412 -17390171 + (T)n Simple_repeat Simple_repeat 1 24 0 957 75 0 15 chr2 235866412 235866546 -17390037 - AluY SINE Alu -179 132 1 2055 109 3 16 chr2 235866547 235866860 -17389723 - L1PB3 LINE L1 -369 5782 5474 574 281 73 15 chr2 235866853 235867180 -17389403 - L1ME2 LINE L1 -824 5256 4911 * 5465 223 59 48 chr2 235867166 235867373 -17389210 - L1ME2 LINE L1 -1671 4409 4206 387 41 0 0 chr2 235867373 235867422 -17389161 + (TG)n Simple_repeat Simple_repeat 2 50 0 5465 223 59 48 chr2 235867422 235867625 -17388958 - L1ME2 LINE L1 -1874 4206 4007 2061 136 125 16 chr2 235867625 235868008 -17388575 + MSTA LTR MaLR 1 425 -3 5465 223 59 48 chr2 235868008 235869502 -17387081 - L1ME2 LINE L1 -2073 4007 2482 691 269 120 55 chr2 235869515 235870440 -17386143 - L1ME2 LINE L1 -4631 1449 443 307 272 136 19 chr2 235870866 235870969 -17385614 + L2 LINE L2 3197 3311 -2 325 373 128 19 chr2 235872948 235873481 -17383102 - L2 LINE L2 -653 2661 2071 2331 88 0 0 chr2 235873633 235873938 -17382645 + AluSc SINE Alu 3 307 -2 180 0 0 0 chr2 235874411 235874431 -17382152 + (TA)n Simple_repeat Simple_repeat 1 20 0 1410 103 0 0 chr2 235874603 235874798 -17381785 + AluSc SINE Alu 115 309 0 459 271 93 7 chr2 235875438 235875589 -17380994 - L1MB8 LINE L1 -16 6162 5999 258 311 6 104 chr2 235877348 235877512 -17379071 + L2 LINE L2 3162 3309 -4 410 351 90 39 chr2 235878720 235879133 -17377450 + L2 LINE L2 2827 3260 -12 272 327 45 51 chr2 235880415 235880571 -17376012 + L2 LINE L2 3159 3313 0 1954 130 3 0 chr2 235880599 235880883 -17375700 - AluSx SINE Alu -27 285 1 1550 195 3 11 chr2 235881031 235881318 -17375265 - AluJo SINE Alu -16 296 12 26 50 0 0 chr2 235881361 235881401 -17375182 + AT_rich Low_complexity Low_complexity 1 40 0 239 254 56 42 chr2 235881863 235881934 -17374649 - L2 LINE L2 0 3313 3242 295 278 200 0 chr2 235883052 235883167 -17373416 - MIR SINE MIR -121 141 4 211 348 92 43 chr2 235883846 235884010 -17372573 - L2 LINE L2 -5 3267 3096 387 313 16 8 chr2 235884702 235884830 -17371753 - MIR3 SINE MIR -28 180 52 2131 118 0 13 chr2 235885332 235885638 -17370945 + AluSx SINE Alu 1 302 -10 689 231 0 0 chr2 235885839 235885973 -17370610 + AluJo SINE Alu 1 134 -178 481 343 38 29 chr2 235886004 235886319 -17370264 - L1ME4a LINE L1 -82 6039 5722 298 366 81 29 chr2 235886335 235886581 -17370002 - MIR SINE MIR -1 261 3 469 316 21 32 chr2 235886994 235887184 -17369399 - L2 LINE L2 0 3313 3126 408 123 0 14 chr2 235887368 235887441 -17369142 - L1MB2 LINE L1 -16 6155 6084 516 32 0 0 chr2 235887475 235887537 -17369046 + (TA)n Simple_repeat Simple_repeat 1 62 0 3295 132 56 77 chr2 235887546 235888238 -17368345 - L1MB3 LINE L1 -23 6160 5483 375 111 0 0 chr2 235888632 235888686 -17367897 - L1MB3 LINE L1 -759 5419 5366 631 195 104 0 chr2 235888694 235888848 -17367735 + MER58A DNA MER1_type 47 216 -8 693 289 6 22 chr2 235888893 235889073 -17367510 - MER5A DNA MER1_type -12 177 1 291 54 0 0 chr2 235889377 235889414 -17367169 + (TG)n Simple_repeat Simple_repeat 2 38 0 1774 186 42 77 chr2 235889414 235889866 -17366717 + MER67D LTR ERV1 1 436 -78 212 100 25 0 chr2 235889952 235889992 -17366591 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 356 298 105 39 chr2 235891808 235892217 -17364366 + MER113 DNA MER1_type? 59 494 -27 23 0 0 0 chr2 235894551 235894574 -17362009 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 235898276 235898299 -17358284 + AT_rich Low_complexity Low_complexity 1 23 0 188 365 77 17 chr2 235898368 235898549 -17358034 - MIR SINE MIR -51 211 20 330 292 46 8 chr2 235900244 235900374 -17356209 - MIR SINE MIR 0 262 128 22 0 0 0 chr2 235901418 235901440 -17355143 + AT_rich Low_complexity Low_complexity 1 22 0 184 362 38 9 chr2 235902781 235902886 -17353697 + MIR3 SINE MIR 83 190 -18 1509 279 117 83 chr2 235903473 235904300 -17352283 - L2 LINE L2 -710 2604 1807 194 61 0 30 chr2 235904300 235904333 -17352250 + (TTATA)n Simple_repeat Simple_repeat 2 33 0 1509 279 117 83 chr2 235904333 235904350 -17352233 - L2 LINE L2 -1507 1807 1792 1691 95 18 0 chr2 235904350 235904572 -17352011 - AluSc SINE Alu -83 226 1 1509 279 117 83 chr2 235904572 235904814 -17351769 - L2 LINE L2 -1522 1792 1480 24 0 0 0 chr2 235905437 235905461 -17351122 + AT_rich Low_complexity Low_complexity 1 24 0 24 32 0 0 chr2 235905616 235905647 -17350936 + AT_rich Low_complexity Low_complexity 1 31 0 240 258 12 37 chr2 235906146 235906309 -17350274 + (CCCA)n Simple_repeat Simple_repeat 1 159 0 22 56 0 0 chr2 235906965 235907001 -17349582 + AT_rich Low_complexity Low_complexity 1 36 0 22 70 0 0 chr2 235908175 235908218 -17348365 + AT_rich Low_complexity Low_complexity 1 43 0 986 278 140 47 chr2 235909458 235910321 -17346262 - L2 LINE L2 -9 3304 2320 795 121 93 7 chr2 235910533 235910673 -17345910 - L1MB1 LINE L1 -7 6161 6010 180 125 0 0 chr2 235911318 235911350 -17345233 + (TTA)n Simple_repeat Simple_repeat 1 32 0 27 0 0 0 chr2 235912026 235912053 -17344530 + AT_rich Low_complexity Low_complexity 1 27 0 1141 160 5 0 chr2 235912217 235912404 -17344179 - AluJb SINE Alu -2 310 123 1581 181 44 10 chr2 235912527 235912820 -17343763 - AluJb SINE Alu -4 308 6 22 0 0 0 chr2 235912870 235912892 -17343691 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr2 235916067 235916091 -17340492 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr2 235916287 235916313 -17340270 + AT_rich Low_complexity Low_complexity 1 26 0 184 226 294 20 chr2 235917194 235917296 -17339287 + L2 LINE L2 3182 3311 -2 180 304 0 0 chr2 235917709 235917755 -17338828 - MIR SINE MIR -91 117 72 250 355 27 18 chr2 235918112 235918222 -17338361 + MIR SINE MIR 79 189 -73 234 188 71 35 chr2 235918340 235918425 -17338158 + L2 LINE L2 2976 3063 -209 745 211 63 47 chr2 235919213 235919403 -17337180 - MER58A DNA MER1_type -31 193 1 475 339 78 18 chr2 235919687 235919905 -17336678 - MIR SINE MIR -1 261 31 204 200 0 0 chr2 235920861 235920906 -17335677 + CT-rich Low_complexity Low_complexity 2 46 0 531 233 161 26 chr2 235921284 235921477 -17335106 - MIR SINE MIR -1 261 43 205 231 0 31 chr2 235921508 235921573 -17335010 + A-rich Low_complexity Low_complexity 2 64 0 609 169 8 0 chr2 235921594 235921712 -17334871 + L1MA8 LINE L1 6170 6288 -3 242 272 62 0 chr2 235921745 235921826 -17334757 + Charlie2 DNA MER1_type 2535 2620 -242 24 32 0 0 chr2 235921878 235921909 -17334674 + AT_rich Low_complexity Low_complexity 1 31 0 2135 77 0 80 chr2 235922930 235923266 -17333317 - AluY SINE Alu -2 309 1 316 216 13 0 chr2 235923391 235923544 -17333039 + (TA)n Simple_repeat Simple_repeat 2 156 0 742 331 59 16 chr2 235923647 235924039 -17332544 - MLT1J LTR MaLR -44 467 18 960 180 42 6 chr2 235924175 235924342 -17332241 + FAM SINE Alu 1 173 -2 30 0 0 0 chr2 235924477 235924507 -17332076 + AT_rich Low_complexity Low_complexity 1 30 0 1563 39 0 0 chr2 235924632 235924814 -17331769 + AluY SINE Alu 127 308 -3 284 306 250 7 chr2 235926796 235926940 -17329643 + MIR SINE MIR 12 190 -72 216 184 0 0 chr2 235926988 235927026 -17329557 - L2 LINE L2 -15 3298 3261 2507 165 45 2 chr2 235927191 235927639 -17328944 - MLT1C LTR MaLR 0 467 1 204 179 0 0 chr2 235927710 235927749 -17328834 + A-rich Low_complexity Low_complexity 1 39 0 204 40 0 0 chr2 235928048 235928073 -17328510 + (TA)n Simple_repeat Simple_repeat 1 25 0 389 300 50 14 chr2 235928693 235928833 -17327750 - MIR SINE MIR -112 150 6 288 158 0 0 chr2 235928936 235928993 -17327590 + CT-rich Low_complexity Low_complexity 2 58 0 509 405 21 35 chr2 235930207 235930775 -17325808 - L2 LINE L2 -2153 1161 602 339 157 0 4 chr2 235930818 235930875 -17325708 - THE1C LTR MaLR -1 425 371 1694 113 79 29 chr2 235930919 235931249 -17325334 - THE1C LTR MaLR -26 370 1 214 424 20 10 chr2 235931538 235931736 -17324847 - L2 LINE L2 -2927 387 188 392 295 84 33 chr2 235932515 235932529 -17324054 + MIR SINE MIR 61 73 -189 1721 154 73 20 chr2 235932529 235932885 -17323698 - THE1C LTR MaLR 0 375 1 392 295 84 33 chr2 235932885 235933051 -17323532 + MIR SINE MIR 73 261 -1 395 129 29 14 chr2 235933568 235933638 -17322945 - THE1B LTR MaLR 0 428 358 208 56 0 56 chr2 235933639 235933675 -17322908 + (TTTTA)n Simple_repeat Simple_repeat 4 37 0 1992 133 0 3 chr2 235933805 235934123 -17322460 - AluSx SINE Alu 0 317 1 2218 106 3 0 chr2 235934127 235934428 -17322155 - THE1B LTR MaLR -62 302 1 315 282 103 8 chr2 235934453 235934570 -17322013 + MIR SINE MIR 68 195 -67 320 118 0 0 chr2 235934816 235934867 -17321716 + Alu SINE Alu 250 300 -2 31 0 0 0 chr2 235936873 235936904 -17319679 + AT_rich Low_complexity Low_complexity 1 31 0 328 257 133 9 chr2 235937164 235937277 -17319306 + MIR SINE MIR 91 217 -45 945 146 0 0 chr2 235937285 235937422 -17319161 + AluSg/x SINE Alu 141 277 -35 351 119 0 0 chr2 235937423 235937490 -17319093 + (TCTG)n Simple_repeat Simple_repeat 2 68 0 292 309 0 27 chr2 235937753 235937902 -17318681 + G-rich Low_complexity Low_complexity 1 145 0 207 88 0 0 chr2 235937983 235938017 -17318566 + (TA)n Simple_repeat Simple_repeat 2 35 0 216 0 0 0 chr2 235938167 235938191 -17318392 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 430 282 108 0 chr2 235938557 235938752 -17317831 - REP3 LTR ERV -58 504 289 305 339 12 29 chr2 235938811 235938982 -17317601 - REP3 LTR ERV -391 171 4 196 217 0 83 chr2 235940821 235940881 -17315702 - L2 LINE L2 -3 3310 3256 21 0 0 0 chr2 235940883 235940904 -17315679 + AT_rich Low_complexity Low_complexity 1 21 0 250 289 53 0 chr2 235940992 235941068 -17315515 + MIR SINE MIR 124 203 -59 2337 103 3 25 chr2 235941347 235941667 -17314916 - AluSq SINE Alu 0 313 1 594 280 102 25 chr2 235942240 235942476 -17314107 + MIR SINE MIR 2 255 -7 27 29 0 0 chr2 235943091 235943125 -17313458 + AT_rich Low_complexity Low_complexity 1 34 0 201 229 0 0 chr2 235943689 235943737 -17312846 + (CA)n Simple_repeat Simple_repeat 1 48 0 443 303 133 26 chr2 235943911 235944106 -17312477 + MIR SINE MIR 47 262 0 407 336 51 51 chr2 235944141 235944415 -17312168 - L3 LINE CR1 -107 1470 1197 203 265 88 15 chr2 235945118 235945186 -17311397 - MER5A DNA MER1_type -84 105 33 183 42 0 0 chr2 235945391 235945415 -17311168 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 402 203 0 0 chr2 235945584 235945727 -17310856 + G-rich Low_complexity Low_complexity 1 143 0 244 254 0 0 chr2 235945767 235945838 -17310745 + G-rich Low_complexity Low_complexity 1 71 0 1715 133 4 34 chr2 235945993 235946256 -17310327 - AluSq SINE Alu -58 255 1 1857 163 0 40 chr2 235946315 235946640 -17309943 + AluJo SINE Alu 1 312 0 354 155 84 0 chr2 235946765 235946836 -17309747 + MLT1D LTR MaLR 3 79 -426 1680 154 21 11 chr2 235946841 235947127 -17309456 + MER1B DNA MER1_type 51 339 0 934 228 96 61 chr2 235947127 235947374 -17309209 + MLT1D LTR MaLR 65 335 -170 216 0 0 0 chr2 235947374 235947398 -17309185 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 934 228 96 61 chr2 235947398 235947576 -17309007 + MLT1D LTR MaLR 335 505 0 893 123 7 0 chr2 235948713 235948859 -17307724 - LTR19A LTR ERV1 0 486 340 2607 100 68 4 chr2 235948861 235949361 -17307222 - LTR19C LTR ERV1 -187 393 1 216 240 0 0 chr2 235949368 235949418 -17307165 - L2 LINE L2 -2 3311 3262 738 149 8 0 chr2 235950493 235950614 -17305969 + AluJb SINE Alu 146 267 -45 189 250 18 18 chr2 235951133 235951189 -17305394 - L3b LINE CR1 -241 1342 1287 2015 67 3 96 chr2 235951899 235952250 -17304333 - AluY SINE Alu 0 322 1 1376 69 11 0 chr2 235953119 235953294 -17303289 + AluY SINE Alu 130 306 -5 578 335 104 15 chr2 235956090 235956619 -17299964 + MLT1K LTR MaLR 13 588 0 424 345 77 58 chr2 235956762 235957176 -17299407 - L2 LINE L2 -25 3247 2826 261 268 12 0 chr2 235957698 235957780 -17298803 + (TA)n Simple_repeat Simple_repeat 2 84 0 976 196 5 28 chr2 235957952 235958166 -17298417 + MER3 DNA MER1_type 1 209 0 247 174 0 0 chr2 235958293 235958339 -17298244 - MLT2C2 LTR ERVL -2 462 417 183 71 71 0 chr2 235958344 235958386 -17298197 + (TA)n Simple_repeat Simple_repeat 2 46 0 234 0 0 0 chr2 235958863 235958889 -17297694 + (T)n Simple_repeat Simple_repeat 1 26 0 266 161 161 0 chr2 235958913 235958975 -17297608 - L2 LINE L2 -72 3241 3170 33 25 0 0 chr2 235960548 235960588 -17295995 + AT_rich Low_complexity Low_complexity 1 40 0 227 374 53 0 chr2 235961570 235961701 -17294882 + MIR SINE MIR 125 262 0 337 311 111 26 chr2 235962997 235963187 -17293396 + MIR SINE MIR 1 206 -56 1387 230 59 12 chr2 235963198 235963642 -17292941 + MER119 DNA MER1_type 2 540 -43 602 273 116 5 chr2 235964233 235964449 -17292134 - MIR SINE MIR 0 262 23 993 313 53 29 chr2 235964473 235965023 -17291560 - MLT1K LTR MaLR -23 565 3 3010 99 16 2 chr2 235966348 235966801 -17289782 - L1MA2 LINE L1 0 6304 5846 389 101 0 19 chr2 235966802 235966885 -17289698 + L1MA2 LINE L1 5767 5844 -312 3520 119 2 15 chr2 235966889 235967419 -17289164 - MER1A DNA MER1_type -6 523 1 415 326 49 13 chr2 235967548 235967772 -17288811 + MLT1J LTR MaLR 16 247 -264 1885 142 139 13 chr2 235968412 235968792 -17287791 + MSTA LTR MaLR 1 428 0 8157 142 37 36 chr2 235968879 235970413 -17286170 + MSTA-int LTR MaLR 45 1580 0 1969 149 128 13 chr2 235970413 235970796 -17285787 + MSTA LTR MaLR 1 427 -1 23 0 0 0 chr2 235971275 235971298 -17285285 + AT_rich Low_complexity Low_complexity 1 23 0 988 150 14 52 chr2 235971584 235971797 -17284786 - MER2 DNA MER2_type -139 206 2 214 341 116 16 chr2 235971961 235972090 -17284493 + MIR3 SINE MIR 13 154 -54 287 98 39 0 chr2 235972559 235972610 -17283973 + GA-rich Low_complexity Low_complexity 3 55 0 4214 68 2 0 chr2 235973653 235974198 -17282385 + L1PA8 LINE L1 5626 6171 -1 290 294 50 50 chr2 235974268 235974348 -17282235 - L2 LINE L2 -10 3303 3224 1472 193 4 32 chr2 235974348 235974628 -17281955 + AluJo SINE Alu 38 309 -3 290 294 50 50 chr2 235974628 235974744 -17281839 - L2 LINE L2 -89 3224 3104 1862 153 0 13 chr2 235974744 235975044 -17281539 + AluJb SINE Alu 1 296 -16 290 294 50 50 chr2 235975044 235975067 -17281516 - L2 LINE L2 -208 3105 3083 469 322 79 6 chr2 235975071 235975248 -17281335 - MIR SINE MIR -44 218 29 200 400 10 10 chr2 235975271 235975371 -17281212 - L2 LINE L2 -278 3035 2936 408 244 44 0 chr2 235975753 235975843 -17280740 + MIR3 SINE MIR 81 174 -34 22 0 0 0 chr2 235976772 235976794 -17279789 + AT_rich Low_complexity Low_complexity 1 22 0 399 333 100 0 chr2 235976850 235977030 -17279553 + MIR SINE MIR 65 262 0 381 297 29 22 chr2 235977108 235977246 -17279337 - L2 LINE L2 0 3313 3175 440 326 51 10 chr2 235977372 235977568 -17279015 - L2 LINE L2 -1116 2198 1995 323 60 20 0 chr2 235977696 235977746 -17278837 - L1PA10 LINE L1 -373 5795 5745 2745 77 16 0 chr2 235977746 235978104 -17278479 + L1PA10 LINE L1 5796 6164 -4 581 288 42 38 chr2 235978113 235978353 -17278230 - MIR SINE MIR -6 256 16 21 0 0 0 chr2 235978389 235978410 -17278173 + AT_rich Low_complexity Low_complexity 1 21 0 363 320 66 25 chr2 235978626 235978823 -17277760 - L1ME LINE L1 -635 5486 5282 2085 132 0 0 chr2 235978888 235979215 -17277368 - L1PA14 LINE L1 -282 5879 5553 1602 114 76 0 chr2 235979215 235979471 -17277112 + L1PA14 LINE L1 5879 6161 0 724 175 38 99 chr2 235979648 235979790 -17276793 - MER3 DNA MER1_type -6 203 77 614 221 16 8 chr2 235979790 235979917 -17276666 - FLAM_A SINE Alu -5 128 1 724 175 38 99 chr2 235979917 235979985 -17276598 - MER3 DNA MER1_type -132 77 6 1309 182 179 3 chr2 235980057 235980207 -17276376 + MLT1A2 LTR MaLR 1 123 -251 423 0 0 0 chr2 235980207 235980254 -17276329 + (TC)n Simple_repeat Simple_repeat 1 47 0 1309 182 179 3 chr2 235980254 235980421 -17276162 + MLT1A2 LTR MaLR 123 374 0 21 0 0 0 chr2 235980825 235980846 -17275737 + AT_rich Low_complexity Low_complexity 1 21 0 741 210 6 6 chr2 235980901 235981063 -17275520 + MLT1A2 LTR MaLR 1 162 -212 309 79 32 16 chr2 235981070 235981133 -17275450 + (TC)n Simple_repeat Simple_repeat 1 64 0 842 234 10 10 chr2 235981135 235981336 -17275247 + MLT1A2 LTR MaLR 174 374 0 557 192 0 13 chr2 235983390 235983541 -17273042 + GA-rich Low_complexity Low_complexity 3 151 0 225 94 0 0 chr2 235984194 235984226 -17272357 + (GA)n Simple_repeat Simple_repeat 2 33 0 457 344 18 0 chr2 235986628 235986791 -17269792 + LTR16A LTR ERVL 232 397 -53 2278 95 0 3 chr2 235987875 235988181 -17268402 + AluSg SINE Alu 1 305 -5 3863 131 32 32 chr2 235989230 235989941 -17266642 - MER50 LTR ERV1 -23 711 1 387 271 31 23 chr2 235990284 235990413 -17266170 - L2 LINE L2 -2 3311 3182 1037 207 67 21 chr2 235990516 235990880 -17265703 + MLT1C LTR MaLR 1 390 0 4648 64 23 1 chr2 235991412 235992206 -17264377 + L1PA7 LINE L1 5098 5906 -248 1370 130 4 17 chr2 235992307 235992545 -17264038 + L1PA7 LINE L1 5917 6151 -3 204 179 0 0 chr2 235993331 235993370 -17263213 + (TATATG)n Simple_repeat Simple_repeat 4 42 0 516 161 11 0 chr2 235993371 235993458 -17263125 - FLAM_A SINE Alu -27 115 28 322 264 137 47 chr2 235993903 235994115 -17262468 - MIR SINE MIR -10 252 22 654 299 71 0 chr2 235994233 235994457 -17262126 - MIR SINE MIR -1 261 22 23 0 0 0 chr2 235994960 235994983 -17261600 + AT_rich Low_complexity Low_complexity 1 23 0 10901 35 0 0 chr2 235995093 235997171 -17259412 - L1PA5 LINE L1 -1 6153 4076 25 0 0 0 chr2 235997335 235997360 -17259223 + AT_rich Low_complexity Low_complexity 1 25 0 2537 51 0 0 chr2 235998419 235998714 -17257869 + AluY SINE Alu 5 299 -12 1635 213 60 7 chr2 235998845 235999291 -17257292 + MER63 DNA MER1_type 592 1061 0 486 229 172 25 chr2 235999422 235999511 -17257072 - MER5A DNA MER1_type 0 189 114 2504 78 0 0 chr2 235999511 235999819 -17256764 - AluY SINE Alu -3 308 1 486 229 172 25 chr2 235999819 235999886 -17256697 - MER5A DNA MER1_type -75 114 10 21 36 0 0 chr2 236002101 236002129 -17254454 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr2 236003268 236003294 -17253289 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr2 236003560 236003581 -17253002 + AT_rich Low_complexity Low_complexity 1 21 0 296 252 114 41 chr2 236003765 236003888 -17252695 - L2 LINE L2 -2 3311 3180 21 36 0 0 chr2 236005155 236005183 -17251400 + AT_rich Low_complexity Low_complexity 1 28 0 426 284 22 52 chr2 236005185 236005417 -17251166 + L1MA10 LINE L1 6075 6299 -35 21 36 0 0 chr2 236005981 236006009 -17250574 + AT_rich Low_complexity Low_complexity 1 28 0 255 309 46 62 chr2 236006516 236006710 -17249873 - MIR SINE MIR -71 191 1 609 222 16 111 chr2 236006866 236007055 -17249528 + MER5A DNA MER1_type 3 173 -16 2249 109 58 11 chr2 236007103 236007451 -17249132 + THE1B LTR MaLR 1 364 0 822 216 34 34 chr2 236007882 236008086 -17248497 - MER20 DNA MER1_type 0 219 16 2226 131 0 0 chr2 236009416 236009722 -17246861 - AluSx SINE Alu -5 307 2 2027 150 3 0 chr2 236010450 236010736 -17245847 - AluSx SINE Alu -25 287 1 1968 134 16 22 chr2 236011247 236011561 -17245022 - AluSq SINE Alu -1 312 1 501 229 22 50 chr2 236011814 236011993 -17244590 + MER5B DNA MER1_type 5 178 0 21 0 0 0 chr2 236012585 236012606 -17243977 + AT_rich Low_complexity Low_complexity 1 21 0 1472 202 91 6 chr2 236014553 236014884 -17241699 - MSTB LTR MaLR -67 359 1 1744 174 7 7 chr2 236014939 236015233 -17241350 - AluJb SINE Alu -17 295 2 315 343 136 47 chr2 236015506 236015675 -17240908 + L2 LINE L2 2556 2739 -575 560 294 43 5 chr2 236015681 236015868 -17240715 + MER63A DNA MER1_type 16 209 -1 216 369 74 0 chr2 236017465 236017587 -17238996 + L2 LINE L2 3138 3268 -4 755 340 22 22 chr2 236017942 236018310 -17238273 - L2 LINE L2 -2232 1082 715 180 0 0 0 chr2 236018515 236018535 -17238048 + (CAAAAA)n Simple_repeat Simple_repeat 2 21 0 2118 76 14 14 chr2 236021266 236021554 -17235029 - AluY SINE Alu -15 296 9 329 262 10 58 chr2 236021659 236021762 -17234821 + L2 LINE L2 3175 3272 0 215 316 0 13 chr2 236021771 236021862 -17234721 + GA-rich Low_complexity Low_complexity 1 153 0 202 309 131 48 chr2 236023421 236023505 -17233078 - MIR SINE MIR -60 148 58 235 279 0 16 chr2 236023780 236023841 -17232742 - L2 LINE L2 -89 3183 3124 428 360 144 8 chr2 236023963 236024213 -17232370 - L2 LINE L2 -481 2833 2550 193 295 66 0 chr2 236024349 236024410 -17232173 + L2 LINE L2 2403 2467 -847 292 233 151 23 chr2 236024435 236024521 -17232062 - L2 LINE L2 0 3313 3217 1564 170 9 43 chr2 236026087 236026411 -17230172 - MLT1A1 LTR MaLR -52 313 1 2176 126 0 0 chr2 236026674 236026968 -17229615 + AluSg SINE Alu 1 294 -16 314 289 16 16 chr2 236027655 236027783 -17228800 - MLT1K LTR MaLR -8 580 453 277 300 10 0 chr2 236027883 236027983 -17228600 - MLT1K LTR MaLR -330 258 158 236 359 138 0 chr2 236029701 236029868 -17226715 - MIR SINE MIR -15 247 58 792 299 57 46 chr2 236030405 236030864 -17225719 - LTR16B LTR ERVL 0 464 1 285 349 20 5 chr2 236030877 236031072 -17225511 - HERV16 LTR ERVL -12 4984 4787 895 187 6 18 chr2 236031351 236031522 -17225061 - FRAM SINE Alu -8 168 1 380 311 125 15 chr2 236031897 236032161 -17224422 + MLT1I LTR MaLR 98 390 -19 315 233 33 133 chr2 236032295 236032445 -17224138 - MER5A DNA MER1_type -4 185 51 264 30 0 0 chr2 236032719 236032752 -17223831 + (TG)n Simple_repeat Simple_repeat 2 34 0 423 0 0 0 chr2 236033334 236033381 -17223202 + (CA)n Simple_repeat Simple_repeat 2 48 0 180 0 0 0 chr2 236033380 236033400 -17223183 + (GA)n Simple_repeat Simple_repeat 2 21 0 * 783 163 9 37 chr2 236034478 236034936 -17221647 + CT-rich Low_complexity Low_complexity 1 444 0 943 194 175 13 chr2 236036391 236036705 -17219878 - MLT1A1 LTR MaLR 0 365 1 252 171 68 35 chr2 236037398 236037472 -17219111 - L1M2 LINE L1 -530 5770 5695 207 0 0 0 chr2 236037475 236037498 -17219085 + (TG)n Simple_repeat Simple_repeat 2 24 0 210 250 0 0 chr2 236038151 236038191 -17218392 + L3b LINE CR1 1457 1496 -87 233 295 67 29 chr2 236038304 236038409 -17218174 + L3b LINE CR1 1298 1406 -177 184 245 137 49 chr2 236039513 236039615 -17216968 + MIR3 SINE MIR 87 197 -11 2786 185 88 6 chr2 236039819 236040115 -17216468 + L1MA8 LINE L1 5465 5735 -556 312 120 0 0 chr2 236040115 236040165 -17216418 + (CA)n Simple_repeat Simple_repeat 1 50 0 2786 185 88 6 chr2 236040165 236040538 -17216045 + L1MA8 LINE L1 5735 6189 -102 346 95 14 40 chr2 236040538 236040612 -17215971 + (TA)n Simple_repeat Simple_repeat 2 73 0 21 0 0 0 chr2 236040624 236040645 -17215938 + AT_rich Low_complexity Low_complexity 1 21 0 411 177 42 0 chr2 236040645 236040741 -17215842 + L1MA8 LINE L1 6191 6290 -1 1807 184 3 0 chr2 236040743 236041053 -17215530 + AluSx SINE Alu 1 311 -1 35 71 0 0 chr2 236041209 236041279 -17215304 + AT_rich Low_complexity Low_complexity 1 70 0 3864 60 4 8 chr2 236041279 236041793 -17214790 - L1PA3 LINE L1 -3 6152 5641 17222 32 0 0 chr2 236041893 236044524 -17212059 - L1PA3 LINE L1 -285 5870 3240 190 340 126 0 chr2 236044946 236045049 -17211534 - L2 LINE L2 -1 3312 3197 3149 206 38 14 chr2 236045542 236046352 -17210231 + L1PB4 LINE L1 4123 4952 -1194 2020 172 39 27 chr2 236046355 236046896 -17209687 - MLT2A2 LTR ERVL 0 554 1 4174 159 22 42 chr2 236046900 236048050 -17208533 + L1PB4 LINE L1 4955 6083 -73 228 200 22 0 chr2 236048100 236048145 -17208438 + MIR SINE MIR 109 154 -108 331 143 14 43 chr2 236048154 236048224 -17208359 + MLT1E1 LTR MaLR 1 68 -586 1514 179 22 55 chr2 236048242 236048606 -17207977 + MLT1E3 LTR MaLR 273 624 0 215 286 0 0 chr2 236048645 236048687 -17207896 + L2 LINE L2 3210 3251 -21 772 218 135 5 chr2 236049629 236049822 -17206761 - MLT1E1 LTR MaLR -7 647 430 1067 173 51 88 chr2 236049854 236049996 -17206587 - MLT1E1 LTR MaLR -306 348 202 1750 184 3 10 chr2 236049996 236050284 -17206299 - AluJo SINE Alu -26 286 1 1067 173 51 88 chr2 236050284 236050493 -17206090 - MLT1E1 LTR MaLR -452 202 10 1749 147 7 14 chr2 236051635 236051962 -17204621 - AluSx SINE Alu 0 325 1 2279 116 0 0 chr2 236052032 236052343 -17204240 - AluY SINE Alu 0 311 1 28 0 0 0 chr2 236052427 236052455 -17204128 + AT_rich Low_complexity Low_complexity 1 28 0 244 337 91 16 chr2 236053519 236053706 -17202877 + L2 LINE L2 2836 3036 -236 426 271 69 85 chr2 236055220 236055467 -17201116 - L2 LINE L2 -2 3270 3028 1849 166 0 7 chr2 236055740 236056035 -17200548 + AluJo SINE Alu 1 293 -19 584 269 92 60 chr2 236056711 236056993 -17199590 - L2 LINE L2 -9 3304 3014 1523 259 130 27 chr2 236057003 236057680 -17198903 - LTR41 LTR ERVL -6 767 21 770 331 101 12 chr2 236057720 236058125 -17198458 - L2 LINE L2 -325 2988 2551 2406 125 69 29 chr2 236058858 236059088 -17197495 - L1MA3 LINE L1 0 7724 7505 2410 77 10 10 chr2 236059088 236059399 -17197184 - AluY SINE Alu 0 311 1 2406 125 69 29 chr2 236059399 236059648 -17196935 - L1MA3 LINE L1 -219 7505 7226 2188 110 75 20 chr2 236059648 236059993 -17196590 - THE1B LTR MaLR 0 364 1 11202 89 4 12 chr2 236059993 236061080 -17195503 - THE1B-int LTR MaLR 0 1580 486 675 84 0 0 chr2 236061080 236061175 -17195408 + (TTTC)n Simple_repeat Simple_repeat 2 96 0 6761 67 16 21 chr2 236061175 236062104 -17194479 - L1PA7 LINE L1 -8 6146 5219 11202 89 4 12 chr2 236062104 236062607 -17193976 - THE1B-int LTR MaLR -1092 488 1 2023 142 72 17 chr2 236062607 236062952 -17193631 - THE1B LTR MaLR 0 364 1 19506 163 22 29 chr2 236062952 236070219 -17186364 - L1MA3 LINE L1 -494 7230 19 1906 160 10 3 chr2 236071209 236071503 -17185080 - AluSx SINE Alu -16 296 1 453 281 139 55 chr2 236071809 236072030 -17184553 - L2 LINE L2 -938 2376 2114 2185 120 0 10 chr2 236072030 236072362 -17184221 + AluSx SINE Alu 9 312 0 453 281 139 55 chr2 236072362 236072485 -17184098 - L2 LINE L2 -1200 2114 2003 481 119 92 46 chr2 236072556 236072665 -17183918 + MER47A DNA MER2_type 45 158 -208 793 326 57 45 chr2 236072667 236073269 -17183314 - L2 LINE L2 -1318 1996 1388 324 218 128 32 chr2 236073746 236073902 -17182681 + MLT1H1 LTR MaLR 369 539 -16 2244 119 0 0 chr2 236074140 236074434 -17182149 - AluSq SINE Alu -18 295 2 307 287 156 29 chr2 236074596 236074718 -17181865 - LTR50 LTR ERVL -49 746 641 1164 230 50 39 chr2 236074718 236075006 -17181577 + MLT1A1 LTR MaLR 5 299 -66 2125 121 10 10 chr2 236075006 236075311 -17181272 - AluSg SINE Alu -5 305 1 1164 230 50 39 chr2 236075311 236075379 -17181204 + MLT1A1 LTR MaLR 299 365 0 307 287 156 29 chr2 236075379 236075500 -17181083 - LTR50 LTR ERVL -154 641 472 473 249 75 47 chr2 236075570 236075783 -17180800 - LTR50 LTR ERVL -576 219 1 1776 114 111 11 chr2 236076080 236076360 -17180223 + AluSx SINE Alu 3 310 -2 2051 150 3 13 chr2 236076638 236076944 -17179639 - AluSg SINE Alu -7 303 1 520 243 48 43 chr2 236076960 236077256 -17179327 + L1MA9 LINE L1 5959 6258 -33 417 246 66 54 chr2 236078264 236078431 -17178152 + L2 LINE L2 3094 3262 -51 487 294 144 34 chr2 236078670 236078997 -17177586 - MLT1J2 LTR MaLR -2 448 86 192 97 0 0 chr2 236079586 236079617 -17176966 + (TCCA)n Simple_repeat Simple_repeat 2 32 0 291 333 9 18 chr2 236079618 236079732 -17176851 - L2 LINE L2 -9 3304 3192 246 81 0 0 chr2 236079737 236079774 -17176809 + (TATG)n Simple_repeat Simple_repeat 4 40 0 235 281 152 12 chr2 236079797 236079968 -17176615 - L2 LINE L2 -105 3208 3014 1300 190 59 129 chr2 236080530 236081071 -17175512 - MLT1D LTR MaLR -2 503 1 584 207 55 24 chr2 236082049 236082273 -17174310 - MER106B DNA MER1_type -7 1052 1 438 286 58 77 chr2 236082535 236082846 -17173737 - L1ME4a LINE L1 -260 5861 5557 22 0 0 0 chr2 236083142 236083164 -17173419 + AT_rich Low_complexity Low_complexity 1 22 0 1419 266 56 31 chr2 236083286 236083825 -17172758 - L2 LINE L2 0 3313 2763 326 282 65 8 chr2 236083827 236083951 -17172632 - L2 LINE L2 -3 3310 3180 520 323 77 44 chr2 236085423 236085861 -17170722 - L2 LINE L2 -43 3229 2776 2024 131 3 3 chr2 236087175 236087465 -17169118 + AluSx SINE Alu 6 295 -17 471 296 79 20 chr2 236087985 236088188 -17168395 - MIR SINE MIR -11 251 37 576 313 123 0 chr2 236088294 236088505 -17168078 + MIR SINE MIR 18 254 -8 212 83 0 28 chr2 236088506 236088542 -17168041 + (TTA)n Simple_repeat Simple_repeat 1 35 0 222 37 0 0 chr2 236089237 236089264 -17167319 + (TG)n Simple_repeat Simple_repeat 2 28 0 2022 171 0 3 chr2 236089273 236089619 -17166964 - MER7A DNA MER2_type 0 346 4 249 259 0 0 chr2 236089927 236089981 -17166602 + GA-rich Low_complexity Low_complexity 2 55 0 395 359 39 53 chr2 236090887 236091168 -17165415 - L2 LINE L2 -7 3265 2989 2243 191 41 79 chr2 236091194 236091852 -17164731 - LTR48B LTR ERV1 -11 633 1 254 277 238 55 chr2 236091911 236092113 -17164470 - MIR SINE MIR -2 260 22 2132 114 64 22 chr2 236092690 236093050 -17163533 - THE1C LTR MaLR 0 375 1 10350 107 28 21 chr2 236093050 236094619 -17161964 - THE1C-int LTR MaLR 0 1580 1 2079 120 64 19 chr2 236094619 236094978 -17161605 - THE1C LTR MaLR 0 375 1 657 241 63 81 chr2 236095500 236095571 -17161012 - MLT1H1 LTR MaLR -2 553 482 2182 129 7 0 chr2 236095571 236095874 -17160709 - AluSq SINE Alu -8 305 1 657 241 63 81 chr2 236095874 236096281 -17160302 - MLT1H1 LTR MaLR -73 482 32 337 279 38 38 chr2 236097697 236097855 -17158728 - MLT1G LTR MaLR -36 554 397 240 250 0 42 chr2 236097915 236097987 -17158596 - MLT1G LTR MaLR -306 284 216 232 152 0 0 chr2 236098015 236098062 -17158521 - MLT1H LTR MaLR -422 127 6 267 266 91 14 chr2 236098215 236098358 -17158225 + MER112 DNA MER1_type 98 251 -9 208 194 10 163 chr2 236099138 236099236 -17157347 + L3 LINE CR1 1487 1569 -8 30 0 0 0 chr2 236099769 236099799 -17156784 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr2 236100130 236100153 -17156430 + AT_rich Low_complexity Low_complexity 1 23 0 2011 128 7 4 chr2 236100272 236100553 -17156030 - AluSx SINE Alu -26 286 5 461 242 49 21 chr2 236101183 236101348 -17155235 - MLT1A2 LTR MaLR -19 355 189 206 250 0 0 chr2 236101351 236101395 -17155188 + (CA)n Simple_repeat Simple_repeat 1 44 0 226 50 50 0 chr2 236101398 236101438 -17155145 + (GA)n Simple_repeat Simple_repeat 2 43 0 741 159 44 66 chr2 236101438 236101620 -17154963 - MLT1A2 LTR MaLR -196 178 1 2313 93 0 7 chr2 236106081 236106391 -17150192 + AluY SINE Alu 1 308 -3 953 184 50 50 chr2 236107213 236107431 -17149152 + MER20 DNA MER1_type 2 219 0 25 31 0 0 chr2 236107526 236107558 -17149025 + AT_rich Low_complexity Low_complexity 1 32 0 25 0 0 0 chr2 236108785 236108810 -17147773 + AT_rich Low_complexity Low_complexity 1 25 0 2002 141 38 30 chr2 236109171 236109541 -17147042 - THE1C LTR MaLR -2 373 1 2114 123 0 3 chr2 236110256 236110548 -17146035 - AluSx SINE Alu -21 291 1 22 56 0 0 chr2 236110869 236110905 -17145678 + AT_rich Low_complexity Low_complexity 1 36 0 1545 217 10 10 chr2 236111710 236111839 -17144744 + AluJo SINE Alu 1 129 -183 234 0 0 0 chr2 236111839 236111865 -17144718 + (TA)n Simple_repeat Simple_repeat 2 27 0 1545 217 10 10 chr2 236111865 236112035 -17144548 + AluJo SINE Alu 128 300 -12 338 328 69 17 chr2 236112721 236112895 -17143688 - MER5A DNA MER1_type -1 188 6 473 270 185 6 chr2 236113871 236114049 -17142534 - MIR SINE MIR -23 239 30 363 275 154 20 chr2 236115524 236115673 -17140910 + MIR3 SINE MIR 25 193 -15 2225 120 3 0 chr2 236116564 236116872 -17139711 + AluSx SINE Alu 1 309 -3 185 335 118 12 chr2 236118073 236118234 -17138349 + L2 LINE L2 1695 1872 -1442 967 146 0 0 chr2 236118352 236118496 -17138087 - FAM SINE Alu -19 166 23 277 333 156 35 chr2 236118653 236118794 -17137789 + L2 LINE L2 3115 3272 0 192 316 13 26 chr2 236118805 236118881 -17137702 + L2 LINE L2 3183 3257 -56 3677 108 2 28 chr2 236119476 236120039 -17136544 - L1PB1 LINE L1 -5 6146 5599 212 226 108 69 chr2 236120071 236120173 -17136410 + MIR SINE MIR 154 259 -3 234 156 0 0 chr2 236121374 236121419 -17135164 + CT-rich Low_complexity Low_complexity 1 45 0 3317 186 58 47 chr2 236122182 236122272 -17134311 - L1MB3 LINE L1 -9 6174 6086 4143 123 33 47 chr2 236122272 236122973 -17133610 - LTR8 LTR ERV1 0 691 1 3317 186 58 47 chr2 236122973 236123446 -17133137 - L1MB3 LINE L1 -97 6086 5619 2058 98 9 67 chr2 236123446 236123761 -17132822 - AluSc SINE Alu -12 297 1 3317 186 58 47 chr2 236123761 236124280 -17132303 - L1MB3 LINE L1 -564 5619 5072 1050 201 33 27 chr2 236124282 236124581 -17132002 - LTR25 LTR ERV1 -14 780 480 316 143 143 0 chr2 236124551 236124614 -17131969 - MER51A LTR ERV1 -354 280 209 * 535 108 12 0 chr2 236124784 236124867 -17131716 - MER61E LTR ERV1 -485 84 1 2112 216 71 8 chr2 236124868 236125512 -17131071 - L1MB3 LINE L1 -1073 5073 4389 378 203 0 0 chr2 236125554 236125618 -17130965 - L2 LINE L2 -1 3312 3249 638 162 0 9 chr2 236125783 236125894 -17130689 - AluSc SINE Alu -9 300 191 316 320 39 16 chr2 236126729 236126857 -17129726 - MIR3 SINE MIR -34 174 44 225 0 0 0 chr2 236127983 236128008 -17128575 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 248 259 62 37 chr2 236128293 236128374 -17128209 - MER5B DNA MER1_type -90 88 6 362 271 110 8 chr2 236128419 236128537 -17128046 - MIR3 SINE MIR -43 165 36 328 380 32 11 chr2 236129495 236129682 -17126901 - MIR3 SINE MIR -12 196 6 873 331 20 18 chr2 236131704 236132045 -17124538 - MER115 DNA AcHobo -350 343 2 362 319 44 22 chr2 236132232 236132367 -17124216 + MIR SINE MIR 32 169 -93 1250 237 67 19 chr2 236132474 236132846 -17123737 - MLT1B LTR MaLR 0 390 1 189 359 31 0 chr2 236132948 236133012 -17123571 + MIR SINE MIR 20 85 -123 294 299 17 8 chr2 236133139 236133256 -17123327 - MER103 DNA DNA -47 119 2 217 353 54 54 chr2 236133561 236133819 -17122764 + L2 LINE L2 2661 2918 -396 180 135 0 0 chr2 236134174 236134211 -17122372 + (TA)n Simple_repeat Simple_repeat 1 37 0 342 0 0 0 chr2 236134225 236134263 -17122320 + (CA)n Simple_repeat Simple_repeat 2 39 0 206 31 0 31 chr2 236134649 236134681 -17121902 + (CAAAA)n Simple_repeat Simple_repeat 4 34 0 1344 213 20 27 chr2 236134816 236135117 -17121466 - MLT1A2 LTR MaLR 0 374 76 270 192 0 82 chr2 236135170 236135243 -17121340 - MLT1A2 LTR MaLR -307 67 1 2202 187 37 67 chr2 236135310 236135881 -17120702 - MLT2B3 LTR ERVL 0 554 1 192 373 0 0 chr2 236135891 236135958 -17120625 + MIR SINE MIR 190 256 -6 224 361 72 18 chr2 236136326 236136492 -17120091 - MIR3 SINE MIR -3 205 31 23 68 0 0 chr2 236136596 236136640 -17119943 + AT_rich Low_complexity Low_complexity 1 44 0 601 302 47 5 chr2 236137346 236137558 -17119025 - MLT1J2 LTR MaLR -223 227 7 221 307 40 0 chr2 236138313 236138388 -17118195 + MIR SINE MIR 65 142 -120 273 428 26 0 chr2 236138959 236139153 -17117430 + L3 LINE CR1 1374 1572 -5 2075 127 7 7 chr2 236139477 236139776 -17116807 + AluSq SINE Alu 10 308 -5 448 299 77 31 chr2 236141432 236141626 -17114957 - MIR SINE MIR -40 222 20 198 341 0 24 chr2 236142287 236142369 -17114214 - L2 LINE L2 -2 3311 3232 726 192 0 0 chr2 236142684 236142835 -17113748 + (CA)n Simple_repeat Simple_repeat 2 152 0 2455 60 7 0 chr2 236143157 236143457 -17113126 + AluY SINE Alu 1 302 -9 1395 198 0 4 chr2 236143694 236143967 -17112616 + L1MB2 LINE L1 5890 6161 -10 945 189 64 28 chr2 236144019 236144035 -17112548 - L1MB3 LINE L1 -271 5912 5898 628 76 22 0 chr2 236144035 236144127 -17112456 - L1PA7 LINE L1 0 6154 6061 945 189 64 28 chr2 236144127 236144359 -17112224 - L1MB3 LINE L1 -285 5898 5655 1752 179 3 3 chr2 236144370 236144655 -17111928 - AluJb SINE Alu -27 285 1 720 157 52 96 chr2 236144751 236144826 -17111757 + LTR37B LTR ERV1 198 275 -193 2014 115 0 18 chr2 236144826 236145208 -17111375 - AluSx SINE Alu 0 377 1 720 157 52 96 chr2 236145208 236145359 -17111224 + LTR37B LTR ERV1 275 416 -52 395 119 7 10 chr2 236145476 236145594 -17110989 - MER89 LTR ERV1 0 559 410 573 193 9 170 chr2 236145601 236145813 -17110770 + MER57B LTR ERV1 42 248 -184 591 222 18 12 chr2 236146431 236146598 -17109985 + MER57A LTR ERV1 236 403 0 1072 266 19 0 chr2 236146606 236146873 -17109710 - MER89 LTR ERV1 -150 409 138 261 0 0 0 chr2 236147363 236147392 -17109191 + (A)n Simple_repeat Simple_repeat 1 29 0 30 0 0 0 chr2 236147617 236147647 -17108936 + AT_rich Low_complexity Low_complexity 1 30 0 454 340 152 38 chr2 236148013 236148902 -17107681 - L2 LINE L2 -470 2844 1855 22 0 0 0 chr2 236150529 236150551 -17106032 + AT_rich Low_complexity Low_complexity 1 22 0 2424 91 0 3 chr2 236150635 236150942 -17105641 - AluSq SINE Alu -7 306 1 285 328 115 0 chr2 236151137 236151259 -17105324 - L2 LINE L2 -15 3257 3122 2823 188 2 6 chr2 236151274 236151785 -17104798 - MLT2B1 LTR ERVL 0 520 12 1993 162 99 28 chr2 236151829 236152255 -17104328 - MSTB2 LTR MaLR 0 457 2 234 244 89 0 chr2 236152618 236152708 -17103875 - MLT1L LTR MaLR -94 521 424 258 278 19 56 chr2 236152884 236152992 -17103591 - MLT1L LTR MaLR -509 106 3 436 285 134 38 chr2 236153100 236153444 -17103139 - L2 LINE L2 -848 2466 2090 1700 127 0 30 chr2 236154118 236154421 -17102162 - AluSx SINE Alu 0 319 25 576 270 211 8 chr2 236155801 236156228 -17100355 - Charlie8 DNA MER1_type -2153 264 1 22 0 0 0 chr2 236157625 236157647 -17098936 + AT_rich Low_complexity Low_complexity 1 22 0 231 381 36 0 chr2 236157681 236157820 -17098763 + MIR SINE MIR 113 256 -6 256 303 56 11 chr2 236158512 236158601 -17097982 - L2 LINE L2 -226 3046 2954 242 204 19 0 chr2 236158753 236158807 -17097776 + MLT1H LTR MaLR 21 75 -474 249 28 0 0 chr2 236158823 236158859 -17097724 - L1PA3 LINE L1 -3 6152 6117 * 545 15 0 0 chr2 236158856 236158921 -17097662 + L1P2 LINE L1 5633 5697 -457 1228 246 78 0 chr2 236158921 236159267 -17097316 + MLT1H LTR MaLR 63 435 -114 359 21 21 0 chr2 236160474 236160522 -17096061 + (TG)n Simple_repeat Simple_repeat 1 49 0 258 56 0 0 chr2 236160532 236160568 -17096015 + (GA)n Simple_repeat Simple_repeat 1 36 0 288 282 33 83 chr2 236161720 236161922 -17094661 - MIR SINE MIR -55 207 21 249 182 36 18 chr2 236161975 236162030 -17094553 + (TTCA)n Simple_repeat Simple_repeat 1 56 0 498 17 0 0 chr2 236163746 236163805 -17092778 + (CA)n Simple_repeat Simple_repeat 2 60 0 2258 102 0 20 chr2 236163856 236164161 -17092422 + AluSg SINE Alu 1 299 -11 312 392 16 8 chr2 236164302 236164427 -17092156 - L2 LINE L2 -4 3268 3143 569 306 10 16 chr2 236164652 236164845 -17091738 - MIR SINE MIR 0 262 71 855 292 32 29 chr2 236164850 236165162 -17091421 - MLT1K LTR MaLR -273 315 3 7696 16 1 0 chr2 236165770 236167266 -17089317 - L1PA3 LINE L1 -3 6152 4652 1760 163 56 0 chr2 236167303 236167591 -17088992 + AluSx SINE Alu 3 306 -6 208 236 14 28 chr2 236167725 236167869 -17088714 + CT-rich Low_complexity Low_complexity 1 141 0 2273 93 3 0 chr2 236168593 236168883 -17087700 + AluSp SINE Alu 1 291 -22 233 246 16 0 chr2 236168924 236168985 -17087598 + (TATG)n Simple_repeat Simple_repeat 1 62 0 216 231 0 0 chr2 236170268 236170320 -17086263 + (TATATG)n Simple_repeat Simple_repeat 3 54 0 2281 107 3 0 chr2 236170321 236170621 -17085962 - AluSq SINE Alu -12 301 1 189 107 0 0 chr2 236171413 236171441 -17085142 + (TG)n Simple_repeat Simple_repeat 2 29 0 183 311 40 27 chr2 236171451 236171525 -17085058 - MIR SINE MIR -6 256 182 1413 244 44 10 chr2 236171950 236172359 -17084224 + MER76 LTR ERV 1 423 -265 469 159 111 16 chr2 236172357 236172483 -17084100 + MER76 LTR ERV 551 688 0 * 491 214 48 10 chr2 236172488 236172591 -17083992 + L2 LINE L2 3203 3309 -4 21 0 0 0 chr2 236172607 236172628 -17083955 + AT_rich Low_complexity Low_complexity 1 21 0 1232 191 42 61 chr2 236172762 236173123 -17083460 - MLT1A1 LTR MaLR -11 354 1 521 176 0 0 chr2 236173318 236173403 -17083180 - AluJ/FLAM SINE Alu -227 85 1 214 267 145 23 chr2 236173405 236173536 -17083047 + L2 LINE L2 3160 3306 -7 230 308 39 39 chr2 236174243 236174373 -17082210 + MIR SINE MIR 118 247 -15 2559 74 0 0 chr2 236177471 236177782 -17078801 + AluY SINE Alu 1 311 0 2152 115 0 3 chr2 236178134 236178454 -17078129 + AluSx SINE Alu 1 319 0 582 109 0 0 chr2 236179616 236179717 -17076866 + (CA)n Simple_repeat Simple_repeat 2 102 0 2238 108 10 7 chr2 236180833 236181139 -17075444 - AluSq SINE Alu -5 308 2 240 213 0 67 chr2 236181234 236181268 -17075315 + A-rich Low_complexity Low_complexity 5 33 -41 373 79 159 0 chr2 236181268 236181331 -17075252 + L1MC1 LINE L1 6248 6320 -13 240 213 0 67 chr2 236181331 236181371 -17075212 + A-rich Low_complexity Low_complexity 33 74 0 22 35 0 0 chr2 236182461 236182490 -17074093 + AT_rich Low_complexity Low_complexity 1 29 0 336 316 64 35 chr2 236183110 236183281 -17073302 - MIR SINE MIR -22 240 65 271 310 17 7 chr2 236183366 236183472 -17073111 + MIR SINE MIR 13 121 -87 729 229 0 7 chr2 236183709 236183862 -17072721 - MER97a DNA MER1_type? -741 153 2 409 317 53 48 chr2 236185182 236185409 -17071174 - MIR SINE MIR -14 248 21 2243 118 0 0 chr2 236185456 236185753 -17070830 - AluSx SINE Alu -15 297 1 2376 94 0 3 chr2 236187287 236187585 -17068998 - AluSc SINE Alu -12 297 1 264 325 50 25 chr2 236187632 236187792 -17068791 + L2 LINE L2 2945 3108 -164 2267 71 10 26 chr2 236188316 236188625 -17067958 + AluY SINE Alu 1 304 -7 1936 84 0 0 chr2 236189328 236189567 -17067016 + AluSg/x SINE Alu 73 311 -1 4522 125 24 62 chr2 236190157 236190967 -17065616 - MER4E LTR ERV1 0 779 1 246 417 45 15 chr2 236190997 236191129 -17065454 - L2 LINE L2 -4 3268 3133 28 29 0 0 chr2 236191137 236191172 -17065411 + AT_rich Low_complexity Low_complexity 1 35 0 551 263 105 80 chr2 236191735 236192211 -17064372 - L1MC4 LINE L1 -177 7865 7378 279 0 0 0 chr2 236192963 236192994 -17063589 + (T)n Simple_repeat Simple_repeat 1 31 0 25 31 0 0 chr2 236193691 236193723 -17062860 + AT_rich Low_complexity Low_complexity 1 32 0 397 314 102 53 chr2 236194211 236194494 -17062089 + L3b LINE CR1 1277 1573 -10 234 0 0 0 chr2 236194612 236194638 -17061945 + (A)n Simple_repeat Simple_repeat 1 26 0 13871 135 36 33 chr2 236194764 236196970 -17059613 - Tigger1 DNA MER2_type 0 2418 203 1978 120 62 45 chr2 236196970 236197328 -17059255 - THE1B LTR MaLR 0 364 1 13871 135 36 33 chr2 236197328 236197531 -17059052 - Tigger1 DNA MER2_type -2215 203 2 4951 181 12 22 chr2 236199150 236200470 -17056113 - L1PA16 LINE L1 -9 6157 4844 1899 138 25 31 chr2 236200470 236200795 -17055788 - THE1B LTR MaLR -41 323 1 7041 218 9 11 chr2 236200795 236202502 -17054081 - L1 LINE L1 -1369 4777 3074 348 285 44 1 chr2 236202824 236202938 -17053645 + MIR SINE MIR 48 169 -39 2056 120 7 3 chr2 236203504 236203803 -17052780 - AluSc SINE Alu -9 300 1 21 36 0 0 chr2 236203805 236203833 -17052750 + AT_rich Low_complexity Low_complexity 1 28 0 320 326 97 34 chr2 236205055 236205322 -17051261 - MLT1J2 LTR MaLR -20 430 147 236 256 86 68 chr2 236205506 236205623 -17050960 + MIR SINE MIR 34 152 -110 674 302 29 29 chr2 236205749 236205994 -17050589 + MIR SINE MIR 18 262 0 206 338 65 43 chr2 236206835 236206974 -17049609 - L2 LINE L2 -456 2858 2717 215 217 0 0 chr2 236208386 236208432 -17048151 + CT-rich Low_complexity Low_complexity 2 47 0 2040 128 10 0 chr2 236208564 236208861 -17047722 - AluSx SINE Alu -12 300 1 184 211 0 0 chr2 236208936 236208974 -17047609 - MIR SINE MIR -81 127 90 21 0 0 0 chr2 236210623 236210644 -17045939 + AT_rich Low_complexity Low_complexity 1 21 0 400 350 65 0 chr2 236211127 236211327 -17045256 + MIR SINE MIR 47 259 -3 251 246 14 0 chr2 236211642 236211711 -17044872 + (TA)n Simple_repeat Simple_repeat 2 71 0 340 248 68 75 chr2 236211922 236212083 -17044500 - MER5A DNA MER1_type -2 187 28 237 341 146 16 chr2 236212415 236212538 -17044045 - L2 LINE L2 0 3272 3134 309 240 202 0 chr2 236212582 236212686 -17043897 - MIR SINE MIR -72 190 66 2110 125 3 0 chr2 236212749 236213052 -17043531 - AluSx SINE Alu -8 304 1 21 36 0 0 chr2 236214506 236214534 -17042049 + AT_rich Low_complexity Low_complexity 1 28 0 235 338 55 7 chr2 236215062 236215207 -17041376 + L2 LINE L2 3161 3312 -1 22 0 0 0 chr2 236216806 236216828 -17039755 + AT_rich Low_complexity Low_complexity 1 22 0 1225 217 94 7 chr2 236216865 236217164 -17039419 - MER58B DNA MER1_type -15 326 2 207 248 35 26 chr2 236218243 236218356 -17038227 + (TA)n Simple_repeat Simple_repeat 1 114 0 222 37 0 0 chr2 236218527 236218554 -17038029 + (CA)n Simple_repeat Simple_repeat 2 28 0 2824 213 22 37 chr2 236218583 236219140 -17037443 - L1MC3 LINE L1 -9 7776 7229 1325 222 60 14 chr2 236219140 236219487 -17037096 - MLT1A1 LTR MaLR -2 363 1 2824 213 22 37 chr2 236219487 236219606 -17036977 - L1MC3 LINE L1 -556 7229 7110 451 268 113 28 chr2 236221793 236222006 -17034577 + MIR SINE MIR 3 233 -29 793 320 23 4 chr2 236222394 236222650 -17033933 + MIR SINE MIR 2 262 0 1584 199 7 19 chr2 236223553 236223860 -17032723 + AluJo SINE Alu 3 305 -7 249 146 0 0 chr2 236225943 236225991 -17030592 + (TG)n Simple_repeat Simple_repeat 2 49 0 216 282 55 64 chr2 236227973 236228083 -17028500 - L2 LINE L2 -6 3307 3199 306 0 0 0 chr2 236230472 236230506 -17026077 + (A)n Simple_repeat Simple_repeat 1 34 0 301 211 137 21 chr2 236230952 236231047 -17025536 - MER5A DNA MER1_type -80 109 4 506 299 84 0 chr2 236231116 236231283 -17025300 + MER5A DNA MER1_type 9 189 0 410 268 33 12 chr2 236231295 236231419 -17025164 - MER5B DNA MER1_type -2 176 61 210 364 35 52 chr2 236231923 236232096 -17024487 + L2 LINE L2 3099 3268 -4 254 283 0 0 chr2 236232098 236232158 -17024425 - L2 LINE L2 0 3313 3254 286 294 212 12 chr2 236232600 236232770 -17023813 - MIR SINE MIR -13 249 46 21 71 0 0 chr2 236233398 236233440 -17023143 + AT_rich Low_complexity Low_complexity 1 42 0 273 350 49 24 chr2 236233463 236233586 -17022997 - L2 LINE L2 -1 3312 3187 1048 291 35 9 chr2 236235141 236235457 -17021126 + MER69 DNA AcHobo 1 324 -902 230 256 0 67 chr2 236235459 236235549 -17021034 + MER69 DNA AcHobo 2442 2525 -1 688 216 12 18 chr2 236235988 236236159 -17020424 + LTR41 LTR ERVL 11 180 -593 423 274 97 57 chr2 236236316 236236564 -17020019 + LTR41 LTR ERVL 510 767 -6 27 0 0 0 chr2 236236898 236236925 -17019658 + AT_rich Low_complexity Low_complexity 1 27 0 249 309 95 66 chr2 236237389 236237632 -17018951 + MLT1J1 LTR MaLR 36 285 -161 1403 202 103 29 chr2 236237784 236238125 -17018458 - MLT1A2 LTR MaLR -7 367 2 22 35 0 0 chr2 236238379 236238408 -17018175 + AT_rich Low_complexity Low_complexity 1 29 0 22449 29 3 0 chr2 236238714 236242189 -17014394 + L1PA4 LINE L1 2675 6152 -3 389 289 108 40 chr2 236243207 236243456 -17013127 + L1ME LINE L1 4566 4831 -1315 500 116 12 0 chr2 236243461 236243547 -17013036 + (TA)n Simple_repeat Simple_repeat 1 87 0 308 305 64 72 chr2 236243576 236243937 -17012646 + L1ME LINE L1 4877 5234 -912 315 282 87 41 chr2 236244002 236244197 -17012386 + L1ME LINE L1 5325 5528 -2280 1212 181 4 31 chr2 236244202 236244428 -17012155 - AluJo SINE Alu -5 307 88 2180 130 0 16 chr2 236244468 236244784 -17011799 - AluSx SINE Alu -1 311 1 241 170 0 43 chr2 236244786 236244833 -17011750 + L1ME LINE L1 5555 5599 -522 748 269 95 10 chr2 236245008 236245313 -17011270 - MLT1I LTR MaLR -24 385 55 243 0 0 0 chr2 236246102 236246129 -17010454 + (CA)n Simple_repeat Simple_repeat 2 28 0 236 140 0 18 chr2 236246208 236246265 -17010318 + (TA)n Simple_repeat Simple_repeat 2 57 0 310 250 0 43 chr2 236246267 236246359 -17010224 + L1MC4 LINE L1 6614 6701 -1341 1172 226 70 53 chr2 236246372 236246842 -17009741 - MLT2B1 LTR ERVL -42 478 1 1744 73 0 9 chr2 236247248 236247481 -17009102 - L1PA7 LINE L1 -1 6153 5923 328 291 107 56 chr2 236249825 236250059 -17006524 + MIR SINE MIR 9 254 -8 1417 227 111 23 chr2 236250143 236250584 -17005999 + MLT2B1 LTR ERVL 1 480 -40 225 139 0 0 chr2 236250590 236250633 -17005950 + (TA)n Simple_repeat Simple_repeat 2 44 0 332 123 0 0 chr2 236250644 236250701 -17005882 + MLT2B1 LTR ERVL 464 520 0 290 341 37 30 chr2 236252805 236252940 -17003643 + L2 LINE L2 3137 3272 0 1360 248 75 27 chr2 236253662 236254101 -17002482 + MLT2B1 LTR ERVL 1 460 -60 195 100 0 0 chr2 236254257 236254287 -17002296 + (TTTTC)n Simple_repeat Simple_repeat 1 30 0 235 339 71 16 chr2 236254961 236255088 -17001495 + L2 LINE L2 2688 2821 -493 512 369 95 12 chr2 236255138 236255474 -17001109 + L2 LINE L2 2910 3273 -40 28 0 0 0 chr2 236255898 236255926 -17000657 + AT_rich Low_complexity Low_complexity 1 28 0 2394 72 10 0 chr2 236257458 236257763 -16998820 + AluY SINE Alu 1 308 -3 198 258 67 67 chr2 236257919 236258039 -16998544 - L2 LINE L2 -562 2752 2633 244 145 16 16 chr2 236258781 236258843 -16997740 + (TA)n Simple_repeat Simple_repeat 2 63 0 196 197 14 28 chr2 236260312 236260383 -16996200 + (TATATG)n Simple_repeat Simple_repeat 3 72 0 990 192 48 0 chr2 236261040 236261248 -16995335 + MER20 DNA MER1_type 1 218 -1 244 150 0 0 chr2 236262612 236262652 -16993931 + L2 LINE L2 3270 3309 -4 261 98 0 0 chr2 236263442 236263483 -16993100 + (CA)n Simple_repeat Simple_repeat 1 41 0 215 114 23 0 chr2 236264289 236264333 -16992250 + (TAGA)n Simple_repeat Simple_repeat 4 48 0 1715 187 0 10 chr2 236265016 236265305 -16991278 - AluJb SINE Alu -26 286 1 322 330 57 78 chr2 236266231 236266513 -16990070 - L2 LINE L2 -5 3267 2992 832 259 42 0 chr2 236266718 236266907 -16989676 - MER45 DNA AcHobo -1384 197 1 4039 109 78 106 chr2 236267518 236268954 -16987629 + pTR5 LTR ERV1 69 2438 0 284 328 80 16 chr2 236269310 236269435 -16987148 + MER5B DNA MER1_type 4 136 -42 679 178 41 56 chr2 236269482 236269679 -16986904 - L1ME1 LINE L1 -204 5962 5769 21 0 0 0 chr2 236270032 236270053 -16986530 + AT_rich Low_complexity Low_complexity 1 21 0 2179 104 0 10 chr2 236270143 236270431 -16986152 - AluSg SINE Alu -25 285 1 467 169 0 0 chr2 236270778 236270861 -16985722 - MER2 DNA MER2_type -150 195 113 6476 14 0 1 chr2 236271125 236271861 -16984722 + L1PA3 LINE L1 5418 6152 -3 23 33 0 0 chr2 236271861 236271891 -16984692 + AT_rich Low_complexity Low_complexity 1 30 0 5222 121 9 10 chr2 236272530 236273405 -16983178 + L1PA15 LINE L1 5290 6165 0 1580 218 69 19 chr2 236273524 236273956 -16982627 + MLT1C LTR MaLR 6 459 -8 253 365 61 0 chr2 236274119 236274267 -16982316 + MER5A DNA MER1_type 26 182 -7 21 0 0 0 chr2 236274674 236274695 -16981888 + AT_rich Low_complexity Low_complexity 1 21 0 2045 144 10 0 chr2 236275316 236275615 -16980968 - AluSx SINE Alu -9 303 2 184 75 25 25 chr2 236275874 236275914 -16980669 + (TTA)n Simple_repeat Simple_repeat 1 40 0 1236 188 11 23 chr2 236277063 236277324 -16979259 - L1MDa LINE L1 -6089 451 194 298 167 35 9 chr2 236277420 236277534 -16979049 + (TA)n Simple_repeat Simple_repeat 2 118 0 35 63 0 0 chr2 236277539 236277602 -16978981 + AT_rich Low_complexity Low_complexity 1 63 0 366 262 43 14 chr2 236277852 236278041 -16978542 - L1ME LINE L1 -620 5542 5351 732 260 42 8 chr2 236278113 236278474 -16978109 - L1ME LINE L1 -3057 3089 2717 409 180 22 31 chr2 236278656 236279153 -16977430 + (TA)n Simple_repeat Simple_repeat 1 492 0 423 0 0 0 chr2 236279204 236279251 -16977332 + (TA)n Simple_repeat Simple_repeat 1 47 0 249 33 0 0 chr2 236281896 236281926 -16974657 + (A)n Simple_repeat Simple_repeat 1 30 0 2151 81 20 37 chr2 236281926 236282223 -16974360 + AluY SINE Alu 1 292 -19 228 384 18 9 chr2 236282223 236282335 -16974248 + MER5A DNA MER1_type 70 182 -7 192 328 56 62 chr2 236283719 236283914 -16972669 + L2 LINE L2 2968 3161 -111 1041 204 79 0 chr2 236284370 236284610 -16971973 - LTR8A LTR ERV1 0 727 469 260 176 11 33 chr2 236284747 236284838 -16971745 + (TA)n Simple_repeat Simple_repeat 2 90 0 24 0 0 0 chr2 236284996 236285020 -16971563 + AT_rich Low_complexity Low_complexity 1 24 0 717 187 160 0 chr2 236285216 236285366 -16971217 + FAM SINE Alu 1 174 -1 1792 82 41 212 chr2 236285389 236285852 -16970731 + MLT2A2 LTR ERVL 1 384 -69 421 20 0 0 chr2 236285872 236285923 -16970660 - L1PA6 LINE L1 -6 6148 6098 2064 193 92 2 chr2 236286085 236286542 -16970041 + MLT2B1 LTR ERVL 22 519 -1 206 85 0 64 chr2 236286738 236286785 -16969798 + (A)n Simple_repeat Simple_repeat 1 44 0 2146 99 11 0 chr2 236286885 236287169 -16969414 + AluSp SINE Alu 1 287 -26 2340 103 0 0 chr2 236287751 236288052 -16968531 - AluY SINE Alu -10 301 1 1982 224 82 56 chr2 236288554 236289094 -16967489 + MLT2B3 LTR ERVL 1 554 0 1563 177 122 6 chr2 236289145 236289472 -16967111 + MLT1A1 LTR MaLR 1 365 0 655 320 86 32 chr2 236291123 236291598 -16964985 + MLT1J LTR MaLR 1 501 -10 623 281 140 14 chr2 236291650 236291871 -16964712 - MIR SINE MIR 0 262 14 196 322 17 0 chr2 236292012 236292071 -16964512 - L2 LINE L2 -12 3301 3242 236 309 62 0 chr2 236292184 236292265 -16964318 + MIR SINE MIR 160 245 -17 195 250 103 44 chr2 236292271 236292339 -16964244 - MIR SINE MIR -86 176 105 801 324 39 5 chr2 236292349 236292735 -16963848 - LTR16A LTR ERVL 0 450 52 186 286 0 0 chr2 236293281 236293351 -16963232 + (TA)n Simple_repeat Simple_repeat 2 71 0 21 0 0 0 chr2 236293371 236293392 -16963191 + AT_rich Low_complexity Low_complexity 1 21 0 227 189 19 0 chr2 236293648 236293701 -16962882 - MER103 DNA DNA -105 61 8 2126 143 19 40 chr2 236294101 236294473 -16962110 + THE1B LTR MaLR 1 364 0 187 364 66 33 chr2 236294981 236295102 -16961481 - L2 LINE L2 -9 3263 3139 386 176 0 0 chr2 236295651 236295719 -16960864 - MER94 DNA DNA -62 72 5 1944 138 3 26 chr2 236296531 236296835 -16959748 - AluSx SINE Alu -14 298 2 1007 189 11 5 chr2 236297385 236297575 -16959008 - MER3 DNA MER1_type 0 209 19 1825 199 14 11 chr2 236298053 236298405 -16958178 - MLT1A1 LTR MaLR 0 365 13 243 245 0 0 chr2 236298462 236298511 -16958072 + MLT1A1 LTR MaLR 317 365 0 3329 210 14 51 chr2 236298511 236298737 -16957846 + MLT1A1-int LTR MaLR 1 234 -1501 1205 193 169 48 chr2 236298737 236299116 -16957467 - MSTC LTR MaLR 0 428 4 3329 210 14 51 chr2 236299116 236299660 -16956923 + MLT1A1-int LTR MaLR 234 743 -992 407 310 32 45 chr2 236299765 236299920 -16956663 + MLT1A1-int LTR MaLR 1264 1416 -319 1735 207 36 25 chr2 236299928 236300320 -16956263 + MLT1A1-int LTR MaLR 1340 1735 0 1603 213 3 42 chr2 236300320 236300700 -16955883 + MLT1A1 LTR MaLR 1 365 0 393 320 67 52 chr2 236301171 236301440 -16955143 - L2 LINE L2 0 3313 3041 339 321 9 9 chr2 236301644 236301756 -16954827 - L2 LINE L2 0 3272 3161 395 261 124 33 chr2 236302866 236303019 -16953564 - MIR SINE MIR -30 232 66 22 0 0 0 chr2 236303126 236303148 -16953435 + AT_rich Low_complexity Low_complexity 1 22 0 1241 254 66 33 chr2 236303619 236304104 -16952479 - MLT1D LTR MaLR -2 503 3 24 0 0 0 chr2 236304711 236304735 -16951848 + AT_rich Low_complexity Low_complexity 1 24 0 200 159 0 23 chr2 236306192 236306236 -16950347 + CT-rich Low_complexity Low_complexity 2 44 0 731 150 11 28 chr2 236306251 236306431 -16950152 + CT-rich Low_complexity Low_complexity 2 178 0 440 159 44 0 chr2 236306547 236306660 -16949923 + CT-rich Low_complexity Low_complexity 1 118 0 263 304 94 33 chr2 236306890 236307071 -16949512 + Charlie8 DNA MER1_type 2 193 -2224 366 200 113 35 chr2 236307224 236307339 -16949244 - MIR SINE MIR -30 232 109 1478 112 45 14 chr2 236308166 236308389 -16948194 - MER30 DNA MER1_type 0 230 1 253 328 0 32 chr2 236308746 236308871 -16947712 - L1MA10 LINE L1 -3 6331 6211 27 0 0 0 chr2 236308937 236308964 -16947619 + AT_rich Low_complexity Low_complexity 1 27 0 321 274 0 42 chr2 236309061 236309156 -16947427 - L1MC4 LINE L1 -1339 6703 6613 189 0 0 0 chr2 236309157 236309178 -16947405 + (TA)n Simple_repeat Simple_repeat 2 22 0 1370 183 19 40 chr2 236310560 236310882 -16945701 - L1MA7 LINE L1 -6 6285 5971 1724 175 0 7 chr2 236310945 236311236 -16945347 - AluJo SINE Alu -23 289 1 1245 197 28 30 chr2 236311658 236311994 -16944589 + MLT2B3 LTR ERVL 224 554 0 1336 98 10 25 chr2 236312031 236312234 -16944349 - MLT2A2 LTR ERVL -238 215 16 893 127 0 60 chr2 236312237 236312387 -16944196 + MLT1A1 LTR MaLR 225 365 0 336 188 0 0 chr2 236312410 236312479 -16944104 + (CATA)n Simple_repeat Simple_repeat 3 71 0 242 204 0 0 chr2 236312650 236312699 -16943884 + MLT2B1 LTR ERVL 466 514 -6 501 264 20 40 chr2 236312703 236312904 -16943679 + L1M4 LINE L1 4164 4360 -1786 661 251 40 16 chr2 236312978 236313225 -16943358 + L1M4 LINE L1 4370 4622 -1524 3776 238 26 54 chr2 236313232 236314072 -16942511 - L1M4 LINE L1 -1495 4651 3869 1772 168 3 3 chr2 236314072 236314380 -16942203 - AluSx SINE Alu 0 308 1 3776 238 26 54 chr2 236314380 236315036 -16941547 - L1M4 LINE L1 -2277 3869 3196 21 36 0 0 chr2 236315387 236315415 -16941168 + AT_rich Low_complexity Low_complexity 1 28 0 193 355 50 21 chr2 236315520 236315661 -16940922 + MIR SINE MIR 3 147 -115 22 0 0 0 chr2 236316005 236316027 -16940556 + AT_rich Low_complexity Low_complexity 1 22 0 919 254 156 32 chr2 236316055 236316582 -16940001 + L1MEc LINE L1 1759 2350 -4046 * 1082 273 10 0 chr2 236316561 236316858 -16939725 + L1ME1 LINE L1 5933 6232 -3 777 51 0 0 chr2 236317159 236317257 -16939326 + (TTCC)n Simple_repeat Simple_repeat 3 100 0 2051 101 40 24 chr2 236318774 236319070 -16937513 + AluY SINE Alu 1 301 -10 29 0 0 0 chr2 236319889 236319918 -16936665 + AT_rich Low_complexity Low_complexity 1 29 0 413 226 210 11 chr2 236319946 236320132 -16936451 + L1MEc LINE L1 1759 1981 -4415 1203 278 73 5 chr2 236320566 236320962 -16935621 - MLT1C LTR MaLR -42 425 3 310 350 80 12 chr2 236321076 236321486 -16935097 - L1ME LINE L1 -301 5820 5380 31 26 0 0 chr2 236321619 236321657 -16934926 + AT_rich Low_complexity Low_complexity 1 38 0 487 323 121 28 chr2 236321801 236322231 -16934352 + MLT1J LTR MaLR 1 470 -41 23 0 0 0 chr2 236322404 236322427 -16934156 + AT_rich Low_complexity Low_complexity 1 23 0 219 309 113 118 chr2 236323531 236323945 -16932638 - L2 LINE L2 -52 3220 2809 198 359 62 31 chr2 236324083 236324275 -16932308 - L2 LINE L2 -712 2602 2405 1896 170 37 21 chr2 236324375 236324757 -16931826 - MLT1B LTR MaLR -2 388 1 2150 115 52 27 chr2 236325173 236325539 -16931044 + THE1C LTR MaLR 1 375 0 589 206 76 80 chr2 236326613 236326889 -16929694 - MER5C DNA MER1_type 0 324 50 315 71 0 0 chr2 236327000 236327042 -16929541 + (TCTA)n Simple_repeat Simple_repeat 1 42 0 1644 184 0 37 chr2 236327042 236327363 -16929220 - AluJb SINE Alu -3 309 1 1558 281 75 36 chr2 236327366 236328078 -16928505 - L2 LINE L2 -238 3075 2285 3103 287 87 42 chr2 236328082 236328233 -16928350 - L2 LINE L2 -1491 1823 1680 2174 127 3 0 chr2 236328233 236328541 -16928042 - AluSp SINE Alu -4 309 1 3103 287 87 42 chr2 236328541 236329857 -16926726 - L2 LINE L2 -1634 1680 289 1452 206 78 62 chr2 236329975 236330426 -16926157 + MLT1C LTR MaLR 10 467 0 368 247 90 110 chr2 236330426 236330726 -16925857 - MLT1H LTR MaLR -18 531 238 230 324 99 27 chr2 236331945 236332056 -16924527 - MER5C DNA MER1_type -205 119 1 23 101 0 0 chr2 236332368 236332447 -16924136 + AT_rich Low_complexity Low_complexity 1 79 0 7563 140 32 6 chr2 236332454 236333718 -16922865 - HSMAR2 DNA Mariner -2 1300 3 195 69 0 0 chr2 236333883 236333912 -16922671 + (CA)n Simple_repeat Simple_repeat 1 29 0 1987 135 23 57 chr2 236334479 236334865 -16921718 - THE1C LTR MaLR -2 373 1 219 308 19 0 chr2 236335096 236335148 -16921435 + MIR SINE MIR 29 81 -181 2032 144 35 46 chr2 236335677 236336045 -16920538 + THE1B LTR MaLR 1 364 0 224 182 55 18 chr2 236336599 236336654 -16919929 + (TATATG)n Simple_repeat Simple_repeat 3 59 0 24 32 0 0 chr2 236336961 236336992 -16919591 + AT_rich Low_complexity Low_complexity 1 31 0 229 299 134 0 chr2 236337061 236337158 -16919425 - MER91C DNA MER1_type -30 110 1 184 286 0 0 chr2 236337177 236337226 -16919357 - L2 LINE L2 -338 2975 2927 199 165 25 38 chr2 236337350 236337429 -16919154 + GA-rich Low_complexity Low_complexity 2 79 0 218 250 0 0 chr2 236338735 236338783 -16917800 - L2 LINE L2 -5 3308 3261 3323 155 91 21 chr2 236339505 236340184 -16916399 + LTR8A LTR ERV1 1 727 0 456 19 0 0 chr2 236340245 236340298 -16916285 + (CA)n Simple_repeat Simple_repeat 2 54 0 544 269 16 27 chr2 236340308 236340494 -16916089 + MLT2E LTR ERVL 443 626 -2 224 302 75 19 chr2 236340511 236340617 -16915966 - L2 LINE L2 -587 2727 2616 900 244 48 39 chr2 236340905 236341258 -16915325 + MSTD LTR MaLR 6 396 0 257 222 0 86 chr2 236341412 236341493 -16915090 + MIR SINE MIR 119 192 -70 239 276 46 83 chr2 236341505 236341722 -16914861 + L2 LINE L2 3099 3307 -6 229 274 55 0 chr2 236342341 236342414 -16914169 - MER20B DNA MER1_type -650 133 57 253 257 111 49 chr2 236342683 236342827 -16913756 - MIR SINE MIR -41 221 69 1375 212 58 12 chr2 236342832 236343093 -16913490 - MER58B DNA MER1_type -2079 341 61 2142 112 49 25 chr2 236343093 236343459 -16913124 + THE1C LTR MaLR 1 375 0 1375 212 58 12 chr2 236343459 236343523 -16913060 - MER58B DNA MER1_type -2359 61 1 224 340 29 10 chr2 236345205 236345308 -16911275 - L2 LINE L2 -25 3247 3143 247 324 130 0 chr2 236345613 236345721 -16910862 - MIR SINE MIR -100 162 41 804 284 38 8 chr2 236345727 236345966 -16910617 + MIR SINE MIR 10 255 -7 2099 128 20 14 chr2 236347026 236347379 -16909204 + HSMAR2 DNA Mariner 2 356 -946 28412 137 12 60 chr2 236347379 236353860 -16902723 + L1PA8 LINE L1 25 6184 0 207 0 0 0 chr2 236353872 236353895 -16902688 + (CAA)n Simple_repeat Simple_repeat 2 24 0 5692 144 6 34 chr2 236353895 236354377 -16902206 + HSMAR2 DNA Mariner 316 757 -545 457 75 0 0 chr2 236354377 236354444 -16902139 - L1PA8 LINE L1 0 6172 6106 5692 144 6 34 chr2 236354444 236354975 -16901608 + HSMAR2 DNA Mariner 757 1301 -1 446 257 96 15 chr2 236355239 236355375 -16901208 + MIR SINE MIR 116 262 0 414 243 198 0 chr2 236356636 236356747 -16899836 - AluJo SINE Alu -167 135 3 1886 22 0 0 chr2 236357180 236357402 -16899181 + L1PA2 LINE L1 5929 6150 -5 445 276 21 32 chr2 236357902 236358107 -16898476 - L1MC/D LINE L1 -458 5663 5540 399 346 106 14 chr2 236358664 236358872 -16897711 + MIR SINE MIR 34 260 -2 2060 176 49 33 chr2 236359025 236359571 -16897012 - MLT2A2 LTR ERVL 0 554 1 3429 130 27 12 chr2 236361134 236361697 -16894886 + LTR38B LTR ERV1 1 571 -39 580 188 16 8 chr2 236361688 236361816 -16894767 + LTR38B LTR ERV1 480 608 -2 * 447 280 92 30 chr2 236362278 236362614 -16893969 + L1ME LINE L1 657 1013 -5057 852 268 187 42 chr2 236362614 236362935 -16893648 + MLT1G3 LTR MaLR 1 327 -203 697 311 24 0 chr2 236362971 236363177 -16893406 + LTR16A LTR ERVL 240 450 0 22 0 0 0 chr2 236363350 236363372 -16893211 + AT_rich Low_complexity Low_complexity 1 22 0 378 308 89 34 chr2 236363559 236363973 -16892610 + L1ME LINE L1 5295 5775 -346 4163 204 75 4 chr2 236363973 236364811 -16891772 - MER54A LTR ERVL -3 898 1 378 308 89 34 chr2 236364811 236364864 -16891719 + L1ME LINE L1 5775 5824 -297 395 264 107 25 chr2 236364887 236365046 -16891537 + MER97a DNA MER1_type? 6 177 -717 555 118 0 0 chr2 236365046 236365131 -16891452 + AluJ/FLAM SINE Alu 1 85 -227 2022 135 0 7 chr2 236367621 236367925 -16888658 - AluJb SINE Alu -10 302 1 23 0 0 0 chr2 236368036 236368059 -16888524 + AT_rich Low_complexity Low_complexity 1 23 0 407 253 19 65 chr2 236368331 236368430 -16888153 - MIR SINE MIR -10 252 161 1000 268 96 26 chr2 236368430 236368845 -16887738 - MLT1J1 LTR MaLR 0 446 3 407 253 19 65 chr2 236368845 236368899 -16887684 - MIR SINE MIR -101 161 106 25 0 0 0 chr2 236370063 236370088 -16886495 + AT_rich Low_complexity Low_complexity 1 25 0 26 74 0 0 chr2 236370109 236370163 -16886420 + AT_rich Low_complexity Low_complexity 1 54 0 14173 155 13 13 chr2 236370296 236372700 -16883883 - Tigger1 DNA MER2_type -14 2404 1 382 294 72 36 chr2 236372743 236372964 -16883619 + L2 LINE L2 3085 3313 0 2353 221 32 99 chr2 236373004 236373804 -16882779 - L1MD2 LINE L1 -8 6234 5488 252 184 0 0 chr2 236373808 236373857 -16882726 + (TG)n Simple_repeat Simple_repeat 2 50 0 2682 137 39 5 chr2 236373862 236374293 -16882290 - Tigger2 DNA MER2_type 0 2718 2273 386 159 14 14 chr2 236374283 236374352 -16882231 - Tigger2 DNA MER2_type -2649 69 1 * 453 149 292 39 chr2 236374359 236374513 -16882070 - L1MD2 LINE L1 -895 5464 5272 * 7435 203 55 29 chr2 236374510 236375644 -16880939 - L1PA2 LINE L1 -1 6548 5445 2208 75 0 38 chr2 236375644 236375962 -16880621 - AluY SINE Alu -5 306 1 7435 203 55 29 chr2 236375962 236377408 -16879175 - L1PA2 LINE L1 -1104 5445 4038 1989 141 0 3 chr2 236377408 236377705 -16878878 + AluSx SINE Alu 1 296 -16 7435 203 55 29 chr2 236377705 236379163 -16877420 - L1PA2 LINE L1 -2511 4038 2394 2127 179 77 26 chr2 236379205 236379748 -16876835 - L1MDa LINE L1 -4296 2244 1674 1722 184 10 3 chr2 236379817 236380116 -16876467 + AluJb SINE Alu 1 301 -11 1070 268 72 14 chr2 236380177 236380595 -16875988 + L1MC3 LINE L1 569 1010 -5035 * 1430 238 189 7 chr2 236380585 236381174 -16875409 + L1MC3 LINE L1 1445 2140 -4424 677 241 85 30 chr2 236381241 236381511 -16875072 - L1MCa LINE L1 -4009 2417 2133 9070 229 58 45 chr2 236381529 236382224 -16874359 + L1MC3 LINE L1 3064 3749 -4454 1554 174 65 0 chr2 236382224 236382500 -16874083 + AluJo SINE Alu 1 294 -18 9070 229 58 45 chr2 236382500 236383577 -16873006 + L1MC3 LINE L1 3749 4811 -3392 2436 130 8 3 chr2 236383577 236383939 -16872644 - THE1B LTR MaLR 0 364 1 9070 229 58 45 chr2 236383939 236386731 -16869852 + L1MC3 LINE L1 4811 7567 -636 1555 217 100 0 chr2 236386731 236387091 -16869492 + MSTD LTR MaLR 1 396 0 9070 229 58 45 chr2 236387091 236387416 -16869167 + L1MC3 LINE L1 7567 8014 -189 230 0 0 32 chr2 236387416 236387447 -16869136 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 9070 229 58 45 chr2 236387447 236387640 -16868943 + L1MC3 LINE L1 8014 8203 0 1394 93 10 0 chr2 236387684 236387889 -16868694 + L1MA2 LINE L1 6098 6304 0 304 227 27 0 chr2 236388908 236388983 -16867600 + MER116 DNA Mariner 1 77 -3 780 312 39 21 chr2 236390006 236390387 -16866196 - MER90 LTR ERV1 -13 562 175 265 177 9 35 chr2 236392588 236392701 -16863882 + (TA)n Simple_repeat Simple_repeat 1 110 0 1745 241 82 12 chr2 236392940 236393426 -16863157 - MLT2B1 LTR ERVL 0 520 1 209 33 33 0 chr2 236393631 236393661 -16862922 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 21 0 0 0 chr2 236393904 236393925 -16862658 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr2 236394041 236394069 -16862514 + AT_rich Low_complexity Low_complexity 1 28 0 393 200 12 25 chr2 236394106 236394186 -16862397 + Tigger5 DNA MER2_type 1 79 -2244 * 1233 177 25 16 chr2 236394177 236394230 -16862353 + Tigger5 DNA MER2_type 2079 2130 -193 2055 102 3 3 chr2 236394230 236394534 -16862049 + AluSp SINE Alu 1 304 0 1233 177 25 16 chr2 236394534 236394722 -16861861 + Tigger5 DNA MER2_type 2130 2323 0 697 239 117 0 chr2 236394723 236394871 -16861712 - L1MD2 LINE L1 -65 6294 6116 288 0 0 0 chr2 236394871 236394903 -16861680 + (TG)n Simple_repeat Simple_repeat 2 33 0 697 239 117 0 chr2 236394903 236394951 -16861632 - L1MD2 LINE L1 -243 6116 6075 2012 153 68 0 chr2 236395244 236395584 -16860999 + THE1B LTR MaLR 1 363 -1 242 284 122 34 chr2 236395849 236395997 -16860586 + MIR SINE MIR 95 255 -7 195 129 0 0 chr2 236396016 236396047 -16860536 + (CA)n Simple_repeat Simple_repeat 2 32 0 352 341 76 36 chr2 236396265 236396514 -16860069 + L2 LINE L2 2811 3069 -244 5847 29 0 0 chr2 236396523 236397219 -16859364 - L1PA2 LINE L1 -981 5165 4470 7869 11 1 0 chr2 236397219 236398227 -16858356 + L1PA2 LINE L1 5143 6151 -4 1731 149 176 16 chr2 236398255 236398624 -16857959 - MSTA LTR MaLR 0 428 1 363 336 131 41 chr2 236398898 236399003 -16857580 + L2 LINE L2 2388 2482 -832 455 175 32 127 chr2 236399003 236399129 -16857454 - MER81 DNA DNA 0 114 1 363 336 131 41 chr2 236399129 236399564 -16857019 + L2 LINE L2 2482 2977 -337 1257 194 158 36 chr2 236400258 236400594 -16855989 + MLT1E1 LTR MaLR 39 415 -239 225 154 0 58 chr2 236400623 236400675 -16855908 - MER116 DNA Mariner -5 75 27 856 238 5 5 chr2 236400711 236400904 -16855679 - MLT1E3 LTR MaLR -6 618 426 432 213 241 24 chr2 236401850 236401865 -16854718 - L2 LINE L2 -1 3312 3302 813 92 0 0 chr2 236401865 236401985 -16854598 + (TTCC)n Simple_repeat Simple_repeat 1 120 0 432 213 241 24 chr2 236401985 236402176 -16854407 - L2 LINE L2 -11 3302 3061 1187 172 51 0 chr2 236402347 236402562 -16854021 - MER30 DNA MER1_type 0 230 5 195 332 11 36 chr2 236403035 236403127 -16853456 + MIR SINE MIR 20 108 -100 685 216 115 7 chr2 236403925 236404073 -16852510 - FAM SINE Alu -10 165 2 340 351 82 26 chr2 236405452 236405683 -16850900 + MIR SINE MIR 19 262 0 6409 151 45 13 chr2 236406066 236407257 -16849326 + Tigger3b DNA MER2_type 2 1231 0 1115 150 17 60 chr2 236407259 236407492 -16849091 + Tigger2a DNA MER2_type 1 223 -211 614 119 40 0 chr2 236407489 236407590 -16848993 - Tigger2 DNA MER2_type -87 2631 2527 * 365 345 64 78 chr2 236408081 236408553 -16848030 - MLT1K LTR MaLR -86 502 38 707 311 48 22 chr2 236408758 236409031 -16847552 + MLT1I LTR MaLR 128 407 -2 21 71 0 0 chr2 236409152 236409194 -16847389 + AT_rich Low_complexity Low_complexity 1 42 0 4847 189 26 1 chr2 236409203 236410110 -16846473 + L1M3f LINE L1 4 933 -4395 * 5283 164 36 17 chr2 236410109 236411119 -16845464 + L1MA4 LINE L1 5177 6209 -91 1538 314 16 92 chr2 236411119 236411609 -16844974 + MLT2A2 LTR ERVL 1 453 0 5283 164 36 17 chr2 236411609 236411698 -16844885 + L1MA4 LINE L1 6209 6295 -5 391 324 54 27 chr2 236411982 236412130 -16844453 + L2 LINE L2 3106 3257 -15 25 31 0 0 chr2 236413652 236413684 -16842899 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr2 236413889 236413910 -16842673 + AT_rich Low_complexity Low_complexity 1 21 0 226 244 22 22 chr2 236414407 236414497 -16842086 + GA-rich Low_complexity Low_complexity 2 91 0 388 258 62 55 chr2 236415330 236415458 -16841125 - L2 LINE L2 -8 3305 3177 964 224 0 0 chr2 236415482 236415678 -16840905 + L1PA16 LINE L1 5952 6147 -19 182 37 37 0 chr2 236415685 236415712 -16840871 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 550 251 52 47 chr2 236416042 236416233 -16840350 - LTR33 LTR ERVL -23 498 307 621 310 18 0 chr2 236416330 236416501 -16840082 - LTR33 LTR ERVL -343 178 5 277 224 299 27 chr2 236418693 236418840 -16837743 - MER5A DNA MER1_type 0 189 3 286 167 33 0 chr2 236419705 236419765 -16836818 - L1ME1 LINE L1 -9 6157 6096 316 235 12 0 chr2 236419768 236419849 -16836734 - L1MC2 LINE L1 -13 6331 6250 396 169 0 36 chr2 236419849 236419932 -16836651 + L1MC1 LINE L1 6181 6260 -73 943 176 82 61 chr2 236419990 236420043 -16836540 - L1MD2 LINE L1 -315 6044 5992 329 291 13 51 chr2 236420043 236420277 -16836306 - L1MB1 LINE L1 -185 5983 5759 330 253 46 11 chr2 236420728 236420815 -16835768 + L1M1 LINE L1 19 108 -7457 857 214 86 24 chr2 236420818 236421028 -16835555 + L1M1 LINE L1 356 578 -6987 * 14199 166 29 4 chr2 236421024 236425465 -16831118 + L1M1 LINE L1 2029 6579 -986 979 202 5 52 chr2 236425912 236426121 -16830462 - L1M4 LINE L1 -3750 2632 2434 4367 112 8 62 chr2 236426121 236426851 -16829732 + LTR8 LTR ERV1 1 691 0 979 202 5 52 chr2 236426851 236426954 -16829629 - L1M4 LINE L1 -3948 2434 2328 188 146 0 21 chr2 236427094 236427142 -16829441 + (TAAAAA)n Simple_repeat Simple_repeat 2 48 0 253 341 12 0 chr2 236427409 236427491 -16829092 + MLT1G LTR MaLR 55 137 -458 385 280 69 90 chr2 236427585 236427774 -16828809 + MLT1G LTR MaLR 203 387 -203 180 0 0 0 chr2 236428051 236428071 -16828512 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 191 320 0 51 chr2 236428259 236428337 -16828246 - MIR3 SINE MIR -21 187 114 244 272 146 61 chr2 236428573 236428786 -16827797 + L2 LINE L2 3083 3313 0 * 460 335 6 0 chr2 236428782 236428952 -16827631 + MIR SINE MIR 56 226 -36 453 250 0 0 chr2 236428994 236429102 -16827481 + L1ME3A LINE L1 5698 5805 -365 556 298 30 13 chr2 236429167 236429402 -16827181 + L1ME3A LINE L1 5919 6157 -13 31 26 0 0 chr2 236429603 236429641 -16826942 + AT_rich Low_complexity Low_complexity 1 38 0 432 156 0 0 chr2 236430017 236430094 -16826489 - Alu SINE Alu 0 310 234 266 301 54 21 chr2 236430244 236430337 -16826246 - L2 LINE L2 -195 3118 3023 2108 100 0 10 chr2 236430409 236430699 -16825884 - AluSx SINE Alu -7 305 19 640 316 121 44 chr2 236430745 236431084 -16825499 - L2 LINE L2 -341 2973 2609 314 121 0 17 chr2 236432091 236432149 -16824434 + (GGAA)n Simple_repeat Simple_repeat 1 57 0 328 233 22 11 chr2 236432150 236432240 -16824343 + GA-rich Low_complexity Low_complexity 2 92 0 9100 180 34 48 chr2 236432572 236434471 -16822112 + L1M2 LINE L1 756 2627 -4222 1973 205 14 16 chr2 236434459 236434976 -16821607 + L1M2 LINE L1 3784 4299 -2549 * 623 154 0 0 chr2 236434973 236435077 -16821506 + L1M2 LINE L1 4634 4737 -2111 * 603 216 26 0 chr2 236435077 236435193 -16821390 + MLT1A1 LTR MaLR 247 365 0 5810 42 4 1 chr2 236435212 236436467 -16820116 + L1PA4 LINE L1 4712 5970 -185 294 191 0 93 chr2 236436567 236436729 -16819854 + G-rich Low_complexity Low_complexity 4 150 0 1412 281 124 7 chr2 236436826 236437391 -16819192 + MER69 DNA AcHobo 77 707 -519 620 266 59 14 chr2 236437442 236437732 -16818851 + MER69 DNA AcHobo 1476 1778 -748 738 174 46 41 chr2 236437767 236437986 -16818597 + MER69 DNA AcHobo 2285 2504 -22 1550 219 40 21 chr2 236438233 236438600 -16817983 - L1MB2 LINE L1 0 6171 5812 * 4582 161 74 6 chr2 236438594 236439373 -16817210 - L1MA4 LINE L1 0 6300 5575 208 51 26 26 chr2 236439373 236439412 -16817171 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 4582 161 74 6 chr2 236439412 236440372 -16816211 - L1MA4 LINE L1 -725 5575 4461 607 288 40 25 chr2 236440385 236440712 -16815871 - L1M1 LINE L1 -4295 3270 2939 192 225 148 88 chr2 236441569 236441751 -16814832 + L2 LINE L2 3036 3228 -85 306 327 41 45 chr2 236442769 236442989 -16813594 - L1MEc LINE L1 -3387 3153 2935 24 53 0 0 chr2 236443308 236443346 -16813237 + AT_rich Low_complexity Low_complexity 1 38 0 310 268 85 68 chr2 236443356 236443591 -16812992 - L1MEc LINE L1 -3991 2730 2492 1329 185 17 20 chr2 236443621 236443923 -16812660 - L1MA4 LINE L1 -6 6294 5994 1304 137 34 0 chr2 236443953 236444186 -16812397 + L1MA4 LINE L1 5745 5985 -315 229 217 33 43 chr2 236444333 236444425 -16812158 - L1MEc LINE L1 -4592 1948 1858 278 317 75 33 chr2 236445324 236445444 -16811139 - L2 LINE L2 -2 3270 3146 2077 120 7 3 chr2 236445813 236446114 -16810469 + AluSg SINE Alu 1 302 -8 363 336 131 41 chr2 236446466 236446571 -16810012 + L2 LINE L2 2388 2482 -832 455 175 32 127 chr2 236446571 236446697 -16809886 - MER81 DNA DNA 0 114 1 363 336 131 41 chr2 236446697 236447132 -16809451 + L2 LINE L2 2482 2977 -337 1257 194 158 36 chr2 236447826 236448162 -16808421 + MLT1E1 LTR MaLR 39 415 -239 225 154 0 58 chr2 236448191 236448243 -16808340 - MER116 DNA Mariner -5 75 27 856 238 5 5 chr2 236448279 236448472 -16808111 - MLT1E3 LTR MaLR -6 618 426 371 346 63 78 chr2 236449913 236450387 -16806196 - MLT1K LTR MaLR -84 504 38 707 311 48 22 chr2 236450592 236450865 -16805718 + MLT1I LTR MaLR 128 407 -2 21 71 0 0 chr2 236450986 236451028 -16805555 + AT_rich Low_complexity Low_complexity 1 42 0 4762 191 28 3 chr2 236451037 236451945 -16804638 + L1M3f LINE L1 4 933 -4395 1096 166 42 26 chr2 236451944 236452266 -16804317 + L1M1 LINE L1 5177 5501 -743 * 4832 181 25 36 chr2 236452369 236453336 -16803247 - L1M3f LINE L1 -4371 957 2 371 150 100 0 chr2 236453342 236453422 -16803161 - L1M3 LINE L1 -349 5822 5735 286 320 25 25 chr2 236454286 236454408 -16802175 + L2 LINE L2 3192 3313 0 403 189 44 0 chr2 236454991 236455081 -16801502 + L1MB1 LINE L1 6075 6168 0 22 35 0 0 chr2 236456154 236456183 -16800400 + AT_rich Low_complexity Low_complexity 1 29 0 1403 115 0 56 chr2 236457409 236457661 -16798922 + L1MA5 LINE L1 6063 6300 0 222 91 0 0 chr2 236457863 236457896 -16798687 + (TG)n Simple_repeat Simple_repeat 2 34 0 345 308 157 29 chr2 236458179 236458351 -16798232 + MLT1J2 LTR MaLR 116 309 -141 886 167 16 38 chr2 236458752 236458938 -16797645 + MLT1A1 LTR MaLR 2 183 -182 216 175 0 0 chr2 236459041 236459081 -16797502 + (CA)n Simple_repeat Simple_repeat 1 40 0 527 200 110 19 chr2 236459159 236459314 -16797269 + MLT1A1 LTR MaLR 197 365 0 216 335 44 44 chr2 236460842 236461000 -16795583 - MER5A DNA MER1_type -9 180 23 21 0 0 0 chr2 236461065 236461086 -16795497 + AT_rich Low_complexity Low_complexity 1 21 0 2336 238 43 17 chr2 236461137 236461950 -16794633 - L1MDa LINE L1 -3678 2862 1862 352 287 107 16 chr2 236463315 236463437 -16793146 + L2 LINE L2 3132 3264 -8 1989 70 0 48 chr2 236465309 236465580 -16791003 - AluY SINE Alu -14 297 40 23 78 0 0 chr2 236465621 236465672 -16790911 + AT_rich Low_complexity Low_complexity 1 51 0 25 0 0 0 chr2 236465753 236465778 -16790805 + AT_rich Low_complexity Low_complexity 1 25 0 216 157 20 20 chr2 236465923 236465974 -16790609 + (TA)n Simple_repeat Simple_repeat 2 52 0 286 284 49 92 chr2 236466346 236466673 -16789910 + MLT1I LTR MaLR 97 409 0 333 0 0 0 chr2 236467670 236467707 -16788876 + (TG)n Simple_repeat Simple_repeat 2 38 0 1611 217 60 68 chr2 236467758 236468260 -16788323 + MLT1D LTR MaLR 7 504 -1 22 0 0 0 chr2 236468369 236468391 -16788192 + AT_rich Low_complexity Low_complexity 1 22 0 2202 119 3 6 chr2 236468393 236468705 -16787878 + AluSx SINE Alu 1 311 -1 321 357 40 0 chr2 236469937 236470063 -16786520 + MIR3 SINE MIR 14 144 -64 29 47 0 0 chr2 236470846 236470889 -16785694 + AT_rich Low_complexity Low_complexity 1 43 0 727 76 0 0 chr2 236470979 236471093 -16785490 - AluSc SINE Alu 0 303 190 731 168 0 8 chr2 236471232 236471357 -16785226 - AluSg SINE Alu -186 124 1 345 236 65 102 chr2 236471885 236472101 -16784482 - MLT1K LTR MaLR 0 588 381 286 264 81 95 chr2 236472814 236473098 -16783485 + L2 LINE L2 2692 2971 -343 527 290 33 62 chr2 236473419 236473643 -16782940 + L2 LINE L2 2843 3059 -254 324 0 0 0 chr2 236473643 236473679 -16782904 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 527 290 33 62 chr2 236473679 236473726 -16782857 + L2 LINE L2 3059 3106 -207 2057 154 30 13 chr2 236473741 236474136 -16782447 - L1MA5 LINE L1 -1 6299 5898 686 142 108 0 chr2 236474145 236474265 -16782318 - L1MA5 LINE L1 -540 5760 5628 381 322 92 6 chr2 236474265 236474439 -16782144 + L2 LINE L2 3121 3309 -4 235 333 32 11 chr2 236474483 236474576 -16782007 + MLT1K LTR MaLR 136 230 -358 2006 141 70 14 chr2 236474592 236474947 -16781636 + THE1C LTR MaLR 1 375 0 239 211 0 0 chr2 236475017 236475074 -16781509 + MLT1K LTR MaLR 365 421 -167 258 284 57 0 chr2 236475484 236475572 -16781011 - MIR3 SINE MIR -15 193 101 25 31 0 0 chr2 236475632 236475664 -16780919 + AT_rich Low_complexity Low_complexity 1 32 0 430 298 15 15 chr2 236476282 236476413 -16780170 - MIR SINE MIR -47 215 85 2810 7 3 0 chr2 236476469 236476779 -16779804 - AluYa5 SINE Alu 0 311 1 236 309 44 29 chr2 236476832 236476968 -16779615 - L2 LINE L2 -1 3312 3175 275 259 0 0 chr2 236477196 236477254 -16779329 - MER5A DNA MER1_type -125 64 7 225 108 0 0 chr2 236478581 236478618 -16777965 + (TA)n Simple_repeat Simple_repeat 1 37 0 1762 178 151 8 chr2 236478618 236478988 -16777595 - MSTA LTR MaLR -5 423 1 664 303 105 36 chr2 236479068 236479458 -16777125 + LTR33 LTR ERVL 1 417 -104 2244 93 7 16 chr2 236479465 236479820 -16776763 - AluSc SINE Alu 0 352 1 189 0 0 0 chr2 236479986 236480007 -16776576 + (T)n Simple_repeat Simple_repeat 1 21 0 1111 224 59 3 chr2 236480501 236480840 -16775743 - L1MB7 LINE L1 -19 6165 5751 2221 68 4 4 chr2 236481953 236482281 -16774302 + AluY SINE Alu 1 328 0 2046 190 97 25 chr2 236482389 236482874 -16773709 - MLT2B1 LTR ERVL 0 520 1 321 294 110 7 chr2 236483441 236483577 -16773006 + MIR SINE MIR 110 259 -3 418 303 108 9 chr2 236483800 236484031 -16772552 + L2 LINE L2 2067 2320 -994 250 261 7 78 chr2 236484551 236484649 -16771934 - HAL1b LINE L1 -471 877 790 13975 150 25 13 chr2 236484649 236487037 -16769546 - Tigger1 DNA MER2_type 0 2418 1 250 261 7 78 chr2 236487037 236487080 -16769503 - HAL1b LINE L1 -558 790 746 332 331 33 0 chr2 236487458 236487579 -16769004 - HAL1 LINE L1 -741 1766 1642 263 317 95 24 chr2 236487600 236487938 -16768645 - HAL1 LINE L1 -1344 1163 802 216 239 239 0 chr2 236488606 236488694 -16767889 - MIR SINE MIR 0 262 154 664 332 131 50 chr2 236488802 236489384 -16767199 + L2 LINE L2 1995 2679 -635 2345 134 6 16 chr2 236489384 236489750 -16766833 - THE1B LTR MaLR -2 362 1 664 332 131 50 chr2 236489750 236490074 -16766509 + L2 LINE L2 2679 2975 -339 2348 253 28 54 chr2 236491519 236491800 -16764783 + L1M4 LINE L1 5 292 -6250 2513 54 0 0 chr2 236491800 236492097 -16764486 - AluY SINE Alu -14 297 1 2348 253 28 54 chr2 236492097 236492535 -16764048 + L1M4 LINE L1 292 705 -5837 6660 242 39 35 chr2 236492651 236493086 -16763497 + L1M4 LINE L1 2205 2637 -4045 4367 112 8 62 chr2 236493086 236493816 -16762767 - LTR8 LTR ERV1 0 691 1 6660 242 39 35 chr2 236493816 236496141 -16760442 + L1M4 LINE L1 2637 4953 -1729 479 0 0 0 chr2 236496141 236496201 -16760382 + L1PA2 LINE L1 6094 6153 -2 216 0 0 0 chr2 236496209 236496233 -16760350 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 6660 242 39 35 chr2 236496233 236496580 -16760003 + L1M4 LINE L1 4959 5303 -1379 1118 216 29 123 chr2 236496580 236497093 -16759490 - MLT1C LTR MaLR 0 467 3 6660 242 39 35 chr2 236497093 236498017 -16758566 + L1M4 LINE L1 5303 6279 -403 383 130 68 51 chr2 236498025 236498202 -16758381 + (TA)n Simple_repeat Simple_repeat 1 180 0 207 191 15 29 chr2 236498195 236498263 -16758320 + (TAAA)n Simple_repeat Simple_repeat 4 70 0 * 197 332 75 48 chr2 236499320 236499507 -16757076 - L2 LINE L2 -984 2330 2139 277 259 0 0 chr2 236499509 236499567 -16757016 + MER5A DNA MER1_type 7 64 -125 341 159 63 0 chr2 236500757 236500820 -16755763 + MER5A DNA MER1_type 89 155 -34 205 247 62 41 chr2 236500889 236500986 -16755597 - L2 LINE L2 -1222 2092 1994 2101 116 17 3 chr2 236501926 236502054 -16754529 + AluSc SINE Alu 1 126 -183 213 39 0 0 chr2 236502054 236502080 -16754503 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 2101 116 17 3 chr2 236502080 236502252 -16754331 + AluSc SINE Alu 126 305 -4 225 0 0 0 chr2 236502258 236502283 -16754300 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 365 268 38 71 chr2 236502287 236502470 -16754113 - L2 LINE L2 -32 3281 3105 541 290 99 8 chr2 236502603 236502865 -16753718 - MLT1J1 LTR MaLR -132 314 29 267 371 91 29 chr2 236502868 236503078 -16753505 - L2 LINE L2 -504 2810 2588 243 371 54 6 chr2 236505143 236505310 -16751273 + MIR3 SINE MIR 27 201 -7 871 259 9 40 chr2 236505881 236506105 -16750478 - MIR SINE MIR -25 237 21 1325 117 19 9 chr2 236506115 236506328 -16750255 - L1PB1 LINE L1 0 6151 5937 24 0 0 0 chr2 236506735 236506759 -16749824 + AT_rich Low_complexity Low_complexity 1 24 0 204 231 0 0 chr2 236507164 236507203 -16749380 + T-rich Low_complexity Low_complexity 3 41 0 1576 190 10 17 chr2 236508071 236508361 -16748222 + AluJo SINE Alu 2 289 -23 822 203 25 0 chr2 236508787 236508950 -16747633 - Tigger3(Golem) DNA MER2_type -3 3026 2860 483 81 47 0 chr2 236508948 236509034 -16747549 - Tigger3(Golem) DNA MER2_type -396 2633 2544 * 1023 222 0 32 chr2 236509034 236509250 -16747333 + AluJo SINE Alu 1 209 -103 254 146 146 0 chr2 236509361 236509409 -16747174 - Tigger3(Golem) DNA MER2_type -834 2195 2141 * 714 229 46 11 chr2 236509407 236509582 -16747001 - Tigger3(Golem) DNA MER2_type -2848 181 1 668 353 86 56 chr2 236510305 236511146 -16745437 + L2 LINE L2 970 1835 -1479 21 0 0 0 chr2 236511462 236511483 -16745100 + AT_rich Low_complexity Low_complexity 1 21 0 1102 226 99 41 chr2 236511894 236512239 -16744344 - MLT1A1 LTR MaLR 0 365 1 5387 213 56 44 chr2 236512243 236513620 -16742963 - MLT1A1-int LTR MaLR -4 1731 338 299 237 21 11 chr2 236513726 236513819 -16742764 + (TA)n Simple_repeat Simple_repeat 2 95 0 383 291 92 68 chr2 236513945 236514240 -16742343 + LTR33A LTR ERVL 214 515 -8 225 343 0 0 chr2 236514282 236514349 -16742234 - MIR SINE MIR -189 73 7 818 154 0 8 chr2 236515493 236515616 -16740967 + FLAM_C SINE Alu 2 123 -20 1761 190 57 39 chr2 236515908 236516365 -16740218 + MER31B LTR ERV1 2 466 0 2215 101 13 3 chr2 236516658 236516956 -16739627 - AluSx SINE Alu -11 301 1 198 0 0 0 chr2 236516997 236517019 -16739564 + (TATTG)n Simple_repeat Simple_repeat 2 23 0 1877 134 21 11 chr2 236517033 236517317 -16739266 - AluSx SINE Alu -25 287 1 26 30 0 0 chr2 236518954 236518987 -16737596 + AT_rich Low_complexity Low_complexity 1 33 0 27 49 0 0 chr2 236519072 236519113 -16737470 + AT_rich Low_complexity Low_complexity 1 41 0 3961 124 34 13 chr2 236520296 236521072 -16735511 + L1PB2 LINE L1 5136 5932 -219 1706 113 0 0 chr2 236521189 236521411 -16735172 + AluSg/x SINE Alu 75 296 -14 927 131 0 7 chr2 236521411 236521564 -16735019 + L1PB2 LINE L1 5964 6115 -36 1966 136 65 8 chr2 236522007 236522375 -16734208 + L1PB2 LINE L1 5544 5932 -219 1706 113 0 0 chr2 236522492 236522714 -16733869 + AluSg/x SINE Alu 77 298 -14 927 131 0 7 chr2 236522714 236522867 -16733716 + L1PB2 LINE L1 5964 6115 -36 601 274 132 0 chr2 236523484 236523674 -16732909 + MER58A DNA MER1_type 1 215 -9 28 0 0 0 chr2 236524100 236524128 -16732455 + AT_rich Low_complexity Low_complexity 1 28 0 211 26 0 53 chr2 236524220 236524258 -16732325 + (CAAAAA)n Simple_repeat Simple_repeat 1 36 0 215 125 42 0 chr2 236524419 236524467 -16732116 + (CATATA)n Simple_repeat Simple_repeat 4 53 0 432 246 41 25 chr2 236524754 236524876 -16731707 - L2 LINE L2 0 3313 3190 1006 291 72 46 chr2 236524898 236525557 -16731026 + L2 LINE L2 2506 3181 -132 202 222 0 0 chr2 236525992 236526028 -16730555 + (CATA)n Simple_repeat Simple_repeat 2 37 0 1330 190 72 29 chr2 236526061 236526340 -16730243 - AluJb SINE Alu -21 291 1 2179 139 50 6 chr2 236526423 236526782 -16729801 - THE1C LTR MaLR 0 375 1 9999 114 15 30 chr2 236526787 236528385 -16728198 - THE1C-int LTR MaLR -6 1574 1 2063 147 18 37 chr2 236528390 236528770 -16727813 - THE1C LTR MaLR -2 373 1 183 129 0 0 chr2 236529255 236529286 -16727297 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 307 312 114 30 chr2 236529399 236529601 -16726982 + MIR SINE MIR 37 255 -7 188 250 28 28 chr2 236529844 236529916 -16726667 + L2 LINE L2 2716 2787 -527 350 318 90 30 chr2 236530047 236530248 -16726335 + MIR SINE MIR 31 243 -19 2015 154 9 29 chr2 236530704 236531048 -16725535 - MER1B DNA MER1_type 0 337 1 749 221 21 55 chr2 236531458 236531748 -16724835 + AluSc SINE Alu 1 280 -19 2164 110 7 3 chr2 236532026 236532326 -16724257 + AluSc SINE Alu 1 301 -8 27 49 0 0 chr2 236532591 236532632 -16723951 + AT_rich Low_complexity Low_complexity 1 41 0 226 333 20 14 chr2 236532931 236533078 -16723505 - LTR16A LTR ERVL -246 204 57 555 102 252 8 chr2 236533165 236533292 -16723291 - MER4C LTR ERV1 -18 447 290 1188 141 134 53 chr2 236533376 236533696 -16722887 - MER4A LTR ERV1 -318 346 1 213 356 161 26 chr2 236533804 236534183 -16722400 + L2 LINE L2 299 728 -2586 1718 107 111 0 chr2 236534204 236534466 -16722117 + AluSg SINE Alu 1 291 -19 303 265 59 10 chr2 236534466 236534558 -16722025 + MER5A DNA MER1_type 9 108 -81 2339 111 10 46 chr2 236536012 236536400 -16720183 + THE1C LTR MaLR 1 374 -1 2352 138 8 0 chr2 236536893 236537254 -16719329 - THE1B LTR MaLR 0 364 1 228 272 54 22 chr2 236537254 236537346 -16719237 - MER5A DNA MER1_type -68 121 27 1593 129 59 11 chr2 236537620 236537892 -16718691 - L1PA16 LINE L1 -9 6157 5873 301 287 117 40 chr2 236538329 236538937 -16717646 + L1MC4a LINE L1 5272 5822 -299 183 167 0 0 chr2 236540133 236540175 -16716408 + (TA)n Simple_repeat Simple_repeat 2 43 0 2115 211 40 28 chr2 236542809 236543755 -16712828 - L1MB8 LINE L1 -9 6169 5092 192 329 53 0 chr2 236543779 236543855 -16712728 - L2 LINE L2 -1 3312 3233 277 30 0 0 chr2 236543986 236544019 -16712564 + U2 snRNA snRNA 1 33 -155 1911 161 135 3 chr2 236544457 236544650 -16711933 - MSTA LTR MaLR 0 428 262 453 19 0 0 chr2 236544650 236544704 -16711879 + (GA)n Simple_repeat Simple_repeat 2 55 0 1911 161 135 3 chr2 236544704 236544888 -16711695 - MSTA LTR MaLR -166 262 1 13666 140 37 17 chr2 236544990 236546191 -16710392 + Tigger1 DNA MER2_type 1 1177 -1241 2119 145 0 0 chr2 236546191 236546494 -16710089 + AluSx SINE Alu 1 303 -9 13666 140 37 17 chr2 236546494 236547662 -16708921 + Tigger1 DNA MER2_type 1177 2417 -1 210 91 0 0 chr2 236548391 236548424 -16708159 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 1472 223 12 42 chr2 236548560 236548969 -16707614 - MLT2C1 LTR ERVL 0 397 1 192 40 0 0 chr2 236549202 236549227 -16707356 + (A)n Simple_repeat Simple_repeat 1 25 0 867 304 125 22 chr2 236549777 236550408 -16706175 + L2 LINE L2 2624 3304 -9 1986 106 50 3 chr2 236552581 236552863 -16703720 + AluSg SINE Alu 1 295 -15 306 0 0 0 chr2 236552918 236552952 -16703631 + (CA)n Simple_repeat Simple_repeat 2 35 0 198 103 0 0 chr2 236553320 236553349 -16703234 + (TA)n Simple_repeat Simple_repeat 2 30 0 3905 161 13 28 chr2 236554349 236554819 -16701764 + MER50 LTR ERV1 9 466 -268 2086 131 0 0 chr2 236554819 236555125 -16701458 + AluSq SINE Alu 1 306 -7 3905 161 13 28 chr2 236555125 236555368 -16701215 + MER50 LTR ERV1 466 711 -23 562 279 139 42 chr2 236555754 236556091 -16700492 + LTR16C LTR ERVL 120 489 -2 23 33 0 0 chr2 236556537 236556567 -16700016 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr2 236556977 236557000 -16699583 + AT_rich Low_complexity Low_complexity 1 23 0 2097 106 0 0 chr2 236557455 236557730 -16698853 + AluSc SINE Alu 24 298 -11 21 0 0 0 chr2 236557996 236558017 -16698566 + AT_rich Low_complexity Low_complexity 1 21 0 23 68 0 0 chr2 236558948 236558992 -16697591 + AT_rich Low_complexity Low_complexity 1 44 0 22 0 0 0 chr2 236559213 236559235 -16697348 + AT_rich Low_complexity Low_complexity 1 22 0 291 327 10 10 chr2 236561295 236561396 -16695187 + L2 LINE L2 2644 2744 -570 306 341 16 23 chr2 236561849 236561978 -16694605 + MIR SINE MIR 9 136 -126 252 264 0 0 chr2 236562011 236562098 -16694485 + GA-rich Low_complexity Low_complexity 1 87 0 754 130 109 14 chr2 236564074 236564212 -16692371 - MER45A DNA AcHobo 0 178 28 183 80 0 0 chr2 236564691 236564716 -16691867 + (A)n Simple_repeat Simple_repeat 1 25 0 444 301 72 6 chr2 236565384 236565550 -16691033 - MIR SINE MIR -11 251 75 330 82 20 0 chr2 236567195 236567244 -16689339 - MADE1 DNA Mariner 0 80 31 180 182 73 18 chr2 236567840 236567895 -16688688 - MIR SINE MIR -189 73 16 2275 148 53 19 chr2 236568421 236568833 -16687750 - MSTC LTR MaLR -2 426 1 195 129 0 0 chr2 236568973 236569004 -16687579 + (CA)n Simple_repeat Simple_repeat 2 32 0 314 67 0 0 chr2 236569068 236569113 -16687470 - Alu SINE Alu -1 300 256 600 258 7 13 chr2 236569155 236569310 -16687273 + MIR SINE MIR 12 165 -97 449 255 64 21 chr2 236569336 236569477 -16687106 + MIR SINE MIR 116 262 0 243 0 0 0 chr2 236569624 236569651 -16686932 + (TG)n Simple_repeat Simple_repeat 1 27 0 26 0 0 0 chr2 236570378 236570404 -16686179 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr2 236570678 236570699 -16685884 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 236570990 236571011 -16685572 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 236571306 236571327 -16685256 + AT_rich Low_complexity Low_complexity 1 21 0 3606 195 31 38 chr2 236571548 236572332 -16684251 + L1MCa LINE L1 2 779 -5647 585 156 142 119 chr2 236572334 236572512 -16684071 + L1MC/D LINE L1 5292 5477 -856 489 106 0 85 chr2 236572512 236572606 -16683977 + L1MC2 LINE L1 6246 6331 -13 585 156 142 119 chr2 236572606 236572645 -16683938 + L1MC/D LINE L1 5477 5514 -819 222 96 39 19 chr2 236572706 236572758 -16683825 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 26 50 0 0 chr2 236572830 236572870 -16683713 + AT_rich Low_complexity Low_complexity 1 40 0 24 0 0 0 chr2 236573047 236573071 -16683512 + AT_rich Low_complexity Low_complexity 1 24 0 244 294 49 29 chr2 236573272 236573374 -16683209 + L3b LINE CR1 1475 1578 -5 228 35 0 0 chr2 236573761 236573790 -16682793 + (CA)n Simple_repeat Simple_repeat 2 30 0 1426 161 100 5 chr2 236573949 236574301 -16682282 + MSTA LTR MaLR 1 428 0 635 216 8 16 chr2 236574399 236574524 -16682059 - FLAM_A SINE Alu -9 124 1 261 57 0 0 chr2 236574557 236574592 -16681991 + (TG)n Simple_repeat Simple_repeat 2 36 0 213 175 0 0 chr2 236575310 236575350 -16681233 + A-rich Low_complexity Low_complexity 2 41 0 1640 179 53 45 chr2 236575565 236575922 -16680661 - MLT1A2 LTR MaLR -14 360 1 554 355 19 9 chr2 236575990 236576205 -16680378 - MIR SINE MIR -21 241 25 3490 123 123 36 chr2 236576280 236576938 -16679645 + LTR62 LTR ERVK 1 715 -4 229 260 14 27 chr2 236577083 236577156 -16679427 + CT-rich Low_complexity Low_complexity 2 73 0 22 0 0 0 chr2 236577242 236577264 -16679319 + AT_rich Low_complexity Low_complexity 1 22 0 2025 138 20 0 chr2 236577279 236577613 -16678970 - AluSq SINE Alu 0 313 2 1821 121 192 16 chr2 236579547 236579911 -16676672 + MSTA LTR MaLR 1 428 0 267 362 15 34 chr2 236580332 236580597 -16675986 - L2 LINE L2 -920 2394 2135 330 351 145 12 chr2 236580860 236581102 -16675481 - L2 LINE L2 -1268 2046 1773 446 363 113 39 chr2 236581317 236581990 -16674593 - L2 LINE L2 -557 2757 2035 436 326 78 29 chr2 236582551 236582793 -16673790 - MIR SINE MIR 0 262 9 318 106 0 0 chr2 236582818 236582865 -16673718 + (T)n Simple_repeat Simple_repeat 1 47 0 522 103 0 0 chr2 236583908 236583986 -16672597 + (TCTA)n Simple_repeat Simple_repeat 4 81 0 246 325 89 8 chr2 236584456 236584579 -16672004 + MLT1J2 LTR MaLR 1 133 -317 2130 127 3 0 chr2 236584599 236584890 -16671693 - AluSx SINE Alu -20 292 1 22 56 0 0 chr2 236584916 236584952 -16671631 + AT_rich Low_complexity Low_complexity 1 36 0 1231 140 0 23 chr2 236585177 236585391 -16671192 + L1PA16 LINE L1 5958 6166 0 211 347 153 29 chr2 236586070 236586456 -16670127 + L2 LINE L2 2125 2558 -756 680 215 1 31 chr2 236586571 236586752 -16669831 + MLT1D LTR MaLR 20 168 -337 282 247 118 0 chr2 236586808 236586901 -16669682 - HAL1 LINE L1 -2111 396 293 407 273 55 38 chr2 236586957 236587140 -16669443 - HAL1 LINE L1 -2318 189 4 23 0 0 0 chr2 236587430 236587453 -16669130 + AT_rich Low_complexity Low_complexity 1 23 0 284 186 24 8 chr2 236587595 236587719 -16668864 + (TA)n Simple_repeat Simple_repeat 1 126 0 324 0 0 0 chr2 236587720 236587756 -16668827 + (CA)n Simple_repeat Simple_repeat 2 37 0 372 311 36 50 chr2 236589531 236589808 -16666775 + L3 LINE CR1 1289 1561 -16 4959 187 78 7 chr2 236589974 236590927 -16665656 + LTR28 LTR ERV1 1 1020 0 1927 140 14 10 chr2 236594442 236594735 -16661848 + AluSx SINE Alu 1 294 -18 1324 204 30 56 chr2 236594915 236595253 -16661330 - MER58B DNA MER1_type -12 329 1 2133 135 0 0 chr2 236595498 236595801 -16660782 - AluSx SINE Alu -9 303 1 26 30 0 0 chr2 236595808 236595841 -16660742 + AT_rich Low_complexity Low_complexity 1 33 0 6434 194 8 24 chr2 236596815 236598220 -16658363 - L1P LINE L1 -858 5288 3912 2822 164 78 7 chr2 236598220 236598756 -16657827 + L1PA15 LINE L1 5587 6165 0 711 143 82 39 chr2 236600163 236600345 -16656238 - Charlie4a DNA MER1_type -6 502 313 607 272 62 25 chr2 236600388 236600631 -16655952 - Charlie4a DNA MER1_type -184 324 73 243 0 0 0 chr2 236603025 236603042 -16653541 + (TG)n Simple_repeat Simple_repeat 1 44 0 243 0 0 0 chr2 236603042 236603069 -16653514 + (TG)n Simple_repeat Simple_repeat 2 28 0 438 325 71 47 chr2 236603207 236603385 -16653198 + L1MEd LINE L1 911 1083 -5227 1960 17 12 12 chr2 236603385 236603625 -16652958 + AluYa5 SINE Alu 72 311 0 438 325 71 47 chr2 236603625 236604031 -16652552 + L1MEd LINE L1 1083 1546 -4764 30 45 0 0 chr2 236604364 236604408 -16652175 + AT_rich Low_complexity Low_complexity 1 44 0 37 76 0 0 chr2 236604437 236604516 -16652067 + AT_rich Low_complexity Low_complexity 1 79 0 26 30 0 0 chr2 236605588 236605621 -16650962 + AT_rich Low_complexity Low_complexity 1 33 0 264 281 60 68 chr2 236605643 236605722 -16650861 + L1MEd LINE L1 981 1059 -5060 817 196 96 0 chr2 236605722 236605921 -16650662 - MER20 DNA MER1_type -1 218 1 264 281 60 68 chr2 236605921 236606090 -16650493 + L1MEd LINE L1 1059 1227 -4892 213 39 0 0 chr2 236606324 236606350 -16650233 + (TAGA)n Simple_repeat Simple_repeat 2 27 0 189 0 0 0 chr2 236606350 236606371 -16650212 + (T)n Simple_repeat Simple_repeat 1 21 0 186 103 0 0 chr2 236606409 236606438 -16650145 + (T)n Simple_repeat Simple_repeat 1 29 0 1895 57 0 4 chr2 236606448 236606677 -16649906 - AluY SINE Alu -83 228 1 21 36 0 0 chr2 236607000 236607028 -16649555 + AT_rich Low_complexity Low_complexity 1 28 0 2170 95 3 7 chr2 236607400 236607718 -16648865 - AluSg SINE Alu 0 317 1 297 287 87 31 chr2 236607855 236608050 -16648533 - L1MC4 LINE L1 -1 8041 7836 1980 261 75 29 chr2 236608169 236609455 -16647128 - L1ME2 LINE L1 -106 6058 4726 279 279 141 62 chr2 236609739 236609982 -16646601 + L1ME4a LINE L1 5527 5810 -311 2291 64 14 4 chr2 236609982 236610262 -16646321 + AluSc SINE Alu 1 283 -26 279 279 141 62 chr2 236610262 236610387 -16646196 + L1ME4a LINE L1 5810 5924 -197 2250 107 0 3 chr2 236610604 236610904 -16645679 + AluSg SINE Alu 1 299 -11 1280 246 38 12 chr2 236610946 236611291 -16645292 - MLT1A1 LTR MaLR -1 364 11 1996 125 0 11 chr2 236612389 236612701 -16643882 - AluSx SINE Alu 0 309 1 711 226 30 18 chr2 236613021 236613189 -16643394 + MER63A DNA MER1_type 4 173 -37 21 57 0 0 chr2 236613815 236613850 -16642733 + AT_rich Low_complexity Low_complexity 1 35 0 2506 79 44 0 chr2 236614352 236614692 -16641891 + THE1A LTR MaLR 1 355 0 347 268 89 32 chr2 236615129 236615252 -16641331 - L2 LINE L2 -8 3305 3176 402 326 63 18 chr2 236615263 236615484 -16641099 + L2 LINE L2 3082 3312 -1 312 27 0 0 chr2 236615930 236615967 -16640616 + (TG)n Simple_repeat Simple_repeat 1 37 0 216 0 0 0 chr2 236615966 236615990 -16640593 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 196 324 27 14 chr2 236616882 236616956 -16639627 - L2 LINE L2 -5 3267 3193 576 216 72 6 chr2 236617140 236617321 -16639262 - L1MEc LINE L1 -4600 1796 1604 1261 109 24 14 chr2 236617455 236617666 -16638917 - L1MA4A LINE L1 -5 6298 6086 4871 137 12 49 chr2 236617693 236618923 -16637660 - L1MA4A LINE L1 -175 6128 4943 308 267 99 15 chr2 236618928 236619025 -16637558 - L1MEc LINE L1 -5069 1136 1024 186 103 0 0 chr2 236619025 236619054 -16637529 + (TA)n Simple_repeat Simple_repeat 1 29 0 308 267 99 15 chr2 236619054 236619087 -16637496 - L1MEc LINE L1 -5181 1024 995 414 274 145 12 chr2 236619088 236619343 -16637240 - L1M4 LINE L1 -1984 4162 3874 * 2351 197 48 53 chr2 236619336 236619961 -16636622 - L1MD1 LINE L1 0 6311 5690 510 245 14 0 chr2 236619951 236620094 -16636489 - L1MD1 LINE L1 -2199 4016 3872 * 21 0 0 0 chr2 236620111 236620132 -16636451 + AT_rich Low_complexity Low_complexity 1 21 0 493 281 47 49 chr2 236620163 236620629 -16635954 - L1MD1 LINE L1 -2335 3880 3326 1013 280 90 28 chr2 236620672 236621651 -16634932 - L1MD1 LINE L1 -2888 3327 2288 373 283 17 17 chr2 236621681 236621801 -16634782 - L1MD1 LINE L1 -4114 2282 2163 438 326 45 54 chr2 236621978 236622291 -16634292 - L1MD1 LINE L1 -4846 1550 1241 435 377 80 32 chr2 236622473 236622850 -16633733 + L1MEc LINE L1 226 620 -5943 23 0 0 0 chr2 236623329 236623352 -16633231 + AT_rich Low_complexity Low_complexity 1 23 0 579 309 43 58 chr2 236623442 236624265 -16632318 + L1MEc LINE L1 1038 1990 -4545 1886 147 3 7 chr2 236624267 236624552 -16632031 - AluSx SINE Alu -28 284 1 1419 168 19 4 chr2 236624673 236624929 -16631654 + AluJb SINE Alu 23 282 -30 813 313 16 6 chr2 236625418 236625907 -16630676 - L1ME LINE L1 -3321 2759 2266 338 226 35 66 chr2 236625947 236626159 -16630424 - L1ME LINE L1 -3922 2180 1993 576 278 65 21 chr2 236626209 236626591 -16629992 + L1MEc LINE L1 3408 3806 -2576 2035 222 38 44 chr2 236626694 236627347 -16629236 - L1M4 LINE L1 -1198 4948 4300 1766 153 3 7 chr2 236627372 236627654 -16628929 - AluSx SINE Alu -31 281 1 329 211 0 29 chr2 236627713 236627817 -16628766 + C-rich Low_complexity Low_complexity 2 102 0 464 265 23 15 chr2 236627931 236628063 -16628520 - MER69 DNA AcHobo -2390 136 4 * 1642 281 31 43 chr2 236628062 236628666 -16627917 + MLT1E3 LTR MaLR 1 597 -27 213 196 10 69 chr2 236629588 236629690 -16626893 + A-rich Low_complexity Low_complexity 3 98 0 191 137 0 20 chr2 236629691 236629742 -16626841 + (CAAAAA)n Simple_repeat Simple_repeat 6 55 0 3407 207 47 17 chr2 236629911 236630609 -16625974 - L1M2 LINE L1 -6145 704 2 977 283 61 67 chr2 236630612 236631225 -16625358 - L1ME LINE L1 -5304 766 154 2571 106 14 22 chr2 236631225 236631592 -16624991 - THE1B LTR MaLR 0 364 1 977 283 61 67 chr2 236631592 236631745 -16624838 - L1ME LINE L1 -5916 154 2 1746 128 0 0 chr2 236632550 236632792 -16623791 - AluSq SINE Alu -71 242 1 813 268 179 55 chr2 236633917 236634443 -16622140 - MLT1E LTR MaLR -2 591 1 205 256 0 0 chr2 236634452 236634495 -16622088 + (CAA)n Simple_repeat Simple_repeat 3 45 0 237 234 78 0 chr2 236634512 236634576 -16622007 - MIR SINE MIR -111 151 83 21 36 0 0 chr2 236634811 236634839 -16621744 + AT_rich Low_complexity Low_complexity 1 28 0 27 29 0 0 chr2 236634984 236635018 -16621565 + AT_rich Low_complexity Low_complexity 1 34 0 1261 136 5 5 chr2 236635052 236635266 -16621317 + L1MA7 LINE L1 6045 6258 -33 229 205 13 26 chr2 236635499 236635577 -16621006 + CT-rich Low_complexity Low_complexity 1 77 0 3002 79 28 0 chr2 236635932 236636325 -16620258 + MLT2A1 LTR ERVL 1 404 -40 355 289 0 0 chr2 236636345 236636435 -16620148 + L1MC4 LINE L1 6614 6703 -1339 412 73 0 0 chr2 236636436 236636491 -16620092 + MLT2A1 LTR ERVL 390 444 0 833 168 7 0 chr2 236636581 236636724 -16619859 + FRAM SINE Alu 31 174 -2 459 98 98 0 chr2 236636727 236636809 -16619774 + L1MA2 LINE L1 6215 6304 0 203 356 106 23 chr2 236638557 236638689 -16617894 + MIR SINE MIR 12 154 -108 219 241 196 36 chr2 236638866 236638978 -16617605 + MIR SINE MIR 127 256 -6 240 344 0 0 chr2 236639163 236639227 -16617356 + L2 LINE L2 3116 3179 -93 21 36 0 0 chr2 236639984 236640012 -16616571 + AT_rich Low_complexity Low_complexity 1 28 0 525 262 136 48 chr2 236640133 236640465 -16616118 - MLT1J1 LTR MaLR -21 425 65 639 175 35 64 chr2 236641483 236641608 -16614975 + L1MB3 LINE L1 6018 6138 -45 2288 96 3 7 chr2 236641608 236641911 -16614672 + AluSq SINE Alu 3 304 -9 639 175 35 64 chr2 236641911 236641956 -16614627 + L1MB3 LINE L1 6138 6183 0 21 57 0 0 chr2 236641958 236641993 -16614590 + AT_rich Low_complexity Low_complexity 1 35 0 21 57 0 0 chr2 236642187 236642222 -16614361 + AT_rich Low_complexity Low_complexity 1 35 0 962 291 131 35 chr2 236642515 236642633 -16613950 + MLT1F1 LTR MaLR 22 127 -440 2423 169 25 52 chr2 236642633 236643111 -16613472 - LTR24 LTR ERV1 -2 465 1 962 291 131 35 chr2 236643111 236643495 -16613088 + MLT1F1 LTR MaLR 127 567 0 1696 168 18 11 chr2 236643696 236643982 -16612601 - AluJo SINE Alu -24 288 1 382 236 56 68 chr2 236643996 236644306 -16612277 + MLT1J2 LTR MaLR 92 450 0 337 94 16 16 chr2 236644653 236644717 -16611866 + (GA)n Simple_repeat Simple_repeat 1 64 0 190 333 42 0 chr2 236645279 236645351 -16611232 - MIR SINE MIR -98 110 36 1568 146 108 24 chr2 236645636 236645924 -16610659 - AluSx SINE Alu 0 312 1 586 273 19 68 chr2 236647472 236647605 -16608978 - MIR3 SINE MIR -4 204 83 2064 153 47 47 chr2 236647605 236648050 -16608533 + MER65A LTR ERV1 1 445 0 586 273 19 68 chr2 236648050 236648121 -16608462 - MIR3 SINE MIR -125 83 10 26 0 0 0 chr2 236649487 236649513 -16607070 + AT_rich Low_complexity Low_complexity 1 26 0 208 116 0 47 chr2 236650211 236650254 -16606329 + (TAAAAA)n Simple_repeat Simple_repeat 2 42 0 250 326 98 13 chr2 236650381 236650617 -16605966 - MER112 DNA MER1_type 0 260 5 * 764 333 62 9 chr2 236650613 236651064 -16605519 + MLT1L LTR MaLR 137 611 -4 646 327 68 31 chr2 236651113 236651465 -16605118 - L2 LINE L2 -6 3307 2943 192 309 73 0 chr2 236651692 236651760 -16604823 + L2 LINE L2 3200 3272 0 252 329 82 0 chr2 236652525 236652610 -16603973 + MIR SINE MIR 28 119 -143 772 178 20 0 chr2 236652643 236652789 -16603794 + L1PA13 LINE L1 6000 6148 -15 2087 110 35 0 chr2 236652814 236653096 -16603487 + AluSq SINE Alu 3 294 -19 229 158 0 0 chr2 236653513 236653551 -16603032 - MIR SINE MIR 0 262 225 181 381 0 0 chr2 236653519 236653582 -16603001 - L2 LINE L2 -12 3301 3239 * 1803 171 3 7 chr2 236653631 236653918 -16602665 + AluJo SINE Alu 1 286 -26 270 56 0 0 chr2 236653937 236653973 -16602610 + (TAAAA)n Simple_repeat Simple_repeat 5 40 0 21 0 0 0 chr2 236654215 236654236 -16602347 + AT_rich Low_complexity Low_complexity 1 21 0 890 233 26 34 chr2 236654288 236654707 -16601876 - LTR40b LTR ERVL 0 462 1 201 274 0 0 chr2 236657063 236657136 -16599447 + CT-rich Low_complexity Low_complexity 2 74 0 1858 139 43 0 chr2 236657155 236657457 -16599126 + L1PA16 LINE L1 5843 6157 -9 3189 67 17 73 chr2 236657508 236657988 -16598595 + MLT2A2 LTR ERVL 1 453 0 250 372 13 0 chr2 236658190 236658268 -16598315 + MIR SINE MIR 35 113 -149 234 0 0 0 chr2 236659440 236659466 -16597117 + (T)n Simple_repeat Simple_repeat 1 26 0 209 268 0 0 chr2 236660036 236660077 -16596506 + (TG)n Simple_repeat Simple_repeat 2 42 0 23 0 0 0 chr2 236661197 236661220 -16595363 + AT_rich Low_complexity Low_complexity 1 23 0 348 337 133 11 chr2 236663112 236663293 -16593290 + MIR SINE MIR 1 203 -59 25 31 0 0 chr2 236663551 236663583 -16593000 + AT_rich Low_complexity Low_complexity 1 32 0 666 252 52 57 chr2 236663590 236663820 -16592763 - MIR SINE MIR -21 241 13 234 306 0 0 chr2 236664530 236664592 -16591991 + L2 LINE L2 3234 3295 -18 262 316 32 32 chr2 236664701 236664796 -16591787 + MIR SINE MIR 47 141 -67 753 308 65 8 chr2 236665572 236665923 -16590660 - LTR16A LTR ERVL -78 372 2 384 184 0 0 chr2 236666276 236666379 -16590204 + (TA)n Simple_repeat Simple_repeat 1 103 0 342 161 0 0 chr2 236666446 236666502 -16590081 + MLT2B1 LTR ERVL 3 58 -462 1681 171 78 6 chr2 236666602 236666935 -16589648 + MLT1B LTR MaLR 32 388 -2 349 279 115 0 chr2 236667576 236667698 -16588885 + MIR SINE MIR 122 257 -5 23 0 0 0 chr2 236668027 236668050 -16588533 + AT_rich Low_complexity Low_complexity 1 23 0 445 342 82 34 chr2 236669098 236669367 -16587216 + L2 LINE L2 3009 3290 -23 198 294 0 0 chr2 236669579 236669630 -16586953 - L2 LINE L2 -5 3267 3217 371 242 0 40 chr2 236670533 236670632 -16585951 - L1MC4 LINE L1 -1334 6708 6614 204 284 9 35 chr2 236670832 236670948 -16585635 + A-rich Low_complexity Low_complexity 2 114 0 267 200 40 80 chr2 236671305 236671405 -16585178 + L1ME LINE L1 5384 5479 -683 2101 141 8 42 chr2 236671737 236672114 -16584469 - THE1B LTR MaLR 0 364 1 10373 111 26 13 chr2 236672114 236672182 -16584401 - THE1B-int LTR MaLR 0 1580 1514 2443 91 0 0 chr2 236672182 236672490 -16584093 - AluY SINE Alu -3 308 1 10373 111 26 13 chr2 236672490 236673980 -16582603 - THE1B-int LTR MaLR -66 1514 1 2151 137 11 40 chr2 236673980 236674353 -16582230 - THE1B LTR MaLR 0 364 3 398 357 88 15 chr2 236674413 236674752 -16581831 - L2 LINE L2 -135 3178 2815 6438 212 90 20 chr2 236675600 236677174 -16579409 - MER52A LTR ERV1 0 1755 1 249 83 0 0 chr2 236677493 236677529 -16579054 + (TC)n Simple_repeat Simple_repeat 1 36 0 578 239 81 29 chr2 236677532 236677879 -16578704 - L1MDa LINE L1 -2896 3644 3280 552 281 87 56 chr2 236677899 236678255 -16578328 - L1MDa LINE L1 -3319 3221 2855 726 249 52 21 chr2 236678351 236678733 -16577850 - L1MDa LINE L1 -3709 2848 2444 1230 274 46 60 chr2 236678737 236678824 -16577759 + L1ME1 LINE L1 3064 3151 -2995 2113 124 7 10 chr2 236678824 236679122 -16577461 - AluSq SINE Alu -16 297 1 1230 274 46 60 chr2 236679122 236679834 -16576749 + L1ME1 LINE L1 3151 3852 -2294 851 353 38 32 chr2 236679858 236680442 -16576141 + L1PA13 LINE L1 788 1374 -6200 256 340 10 0 chr2 236680578 236680675 -16575908 + L1PA13 LINE L1 2085 2182 -5399 11568 249 23 12 chr2 236680967 236683331 -16573252 + L1PA13 LINE L1 2247 4687 -2897 198 103 0 0 chr2 236683331 236683360 -16573223 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 11568 249 23 12 chr2 236683360 236685135 -16571448 + L1PA13 LINE L1 4687 6440 -1144 282 143 0 71 chr2 236685163 236685233 -16571350 + L1PA16 LINE L1 6099 6163 -3 2236 236 102 64 chr2 236685235 236685674 -16570909 + L1ME1 LINE L1 3859 4280 -1886 331 87 0 0 chr2 236685674 236685720 -16570863 - MADE1 DNA Mariner 0 80 35 2236 236 102 64 chr2 236685720 236687460 -16569123 + L1ME1 LINE L1 4280 6166 0 1692 205 45 8 chr2 236687548 236687924 -16568659 - MLT1B LTR MaLR 0 390 1 1260 159 3 115 chr2 236689260 236689625 -16566958 + MER33 DNA MER1_type 1 324 0 236 228 0 13 chr2 236690152 236690231 -16566352 + (TA)n Simple_repeat Simple_repeat 2 79 0 252 167 0 0 chr2 236691017 236691065 -16565518 + (TA)n Simple_repeat Simple_repeat 2 49 0 4500 187 32 26 chr2 236691065 236692127 -16564456 - L1M2 LINE L1 -746 5400 4395 225 0 0 0 chr2 236692127 236692152 -16564431 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 4500 187 32 26 chr2 236692152 236692351 -16564232 - L1M2 LINE L1 -1751 4395 4199 2275 185 17 0 chr2 236692346 236692768 -16563815 + L1MA9 LINE L1 5487 5915 -397 * 2350 196 51 18 chr2 236692774 236693321 -16563262 + L1MA10 LINE L1 5770 6334 0 2119 121 0 0 chr2 236693347 236693672 -16562911 - AluSx SINE Alu 0 325 1 2906 87 15 3 chr2 236693767 236694156 -16562427 + MLT2A2 LTR ERVL 1 394 -59 316 51 14 5 chr2 236694485 236694496 -16562087 + MLT2A1 LTR ERVL 361 370 -74 282 29 0 0 chr2 236694496 236694531 -16562052 + (TA)n Simple_repeat Simple_repeat 1 35 0 316 51 14 5 chr2 236694531 236694571 -16562012 + MLT2A1 LTR ERVL 370 444 0 22 35 0 0 chr2 236695706 236695735 -16560848 + AT_rich Low_complexity Low_complexity 1 29 0 719 320 74 26 chr2 236696157 236696726 -16559857 - L1MEd LINE L1 -5078 1041 446 30833 42 3 2 chr2 236696920 236703060 -16553523 + L1PA4 LINE L1 2 6155 0 479 242 173 90 chr2 236703130 236703419 -16553164 - MLT2B1 LTR ERVL -58 462 150 1907 114 14 11 chr2 236753695 236753976 -16502607 + AluSq SINE Alu 1 282 -31 224 57 0 29 chr2 236753980 236754015 -16502568 + (TAA)n Simple_repeat Simple_repeat 2 35 0 1045 15 15 7 chr2 236754257 236754392 -16502191 + (TTTC)n Simple_repeat Simple_repeat 4 139 0 24 0 0 0 chr2 236755141 236755165 -16501418 + AT_rich Low_complexity Low_complexity 1 24 0 274 294 13 72 chr2 236755192 236755345 -16501238 + MIR SINE MIR 65 208 -54 189 0 0 0 chr2 236757638 236757659 -16498924 + (TA)n Simple_repeat Simple_repeat 1 21 0 300 301 124 16 chr2 236757671 236757857 -16498726 + L1MEc LINE L1 136 341 -6055 1048 135 103 0 chr2 236757957 236758142 -16498441 - L1PA13 LINE L1 -24 6139 5936 1984 150 13 0 chr2 236758161 236758468 -16498115 - AluSq SINE Alu -2 311 1 746 221 19 101 chr2 236758477 236758794 -16497789 - L1M4 LINE L1 -952 5263 4973 3212 250 92 49 chr2 236758813 236759718 -16496865 - L1MEc LINE L1 -2445 3770 2905 1656 164 62 16 chr2 236759718 236760041 -16496542 + MER44D DNA MER2_type 1 608 -1 3212 250 92 49 chr2 236760041 236760065 -16496518 - L1MEc LINE L1 -3310 2905 2883 2130 117 0 0 chr2 236760065 236760369 -16496214 + AluY SINE Alu 1 304 0 3212 250 92 49 chr2 236760369 236761117 -16495466 - L1MEc LINE L1 -3332 2883 2168 372 22 0 0 chr2 236761117 236761162 -16495421 + (TG)n Simple_repeat Simple_repeat 2 46 0 3212 250 92 49 chr2 236761162 236761903 -16494680 - L1MEc LINE L1 -4047 2168 1292 1044 307 24 24 chr2 236761908 236762370 -16494213 - L1MEc LINE L1 -5637 759 298 318 309 21 31 chr2 236762490 236762587 -16493996 - MIR SINE MIR -62 146 51 3996 166 15 21 chr2 236763211 236763940 -16492643 + L1MB2 LINE L1 5308 6032 -139 790 285 48 27 chr2 236767646 236767738 -16488845 + L2 LINE L2 2575 2664 -649 839 189 82 19 chr2 236767738 236767944 -16488639 + MER20 DNA MER1_type 1 219 0 790 285 48 27 chr2 236767944 236768250 -16488333 + L2 LINE L2 2664 3066 -247 830 150 7 0 chr2 236768351 236768504 -16488079 + CT-rich Low_complexity Low_complexity 1 154 0 303 269 40 19 chr2 236768778 236768933 -16487650 - L1ME3A LINE L1 -300 5870 5710 512 267 36 30 chr2 236768951 236769116 -16487467 + L2 LINE L2 3117 3282 -31 1273 276 91 10 chr2 236769160 236769822 -16486761 + L2 LINE L2 2603 3313 0 441 276 14 21 chr2 236772451 236772596 -16483987 + L3b LINE CR1 1251 1394 -189 21 36 0 0 chr2 236772736 236772764 -16483819 + AT_rich Low_complexity Low_complexity 1 28 0 2195 108 6 25 chr2 236772998 236773313 -16483270 + AluSx SINE Alu 3 311 -1 360 43 0 0 chr2 236773960 236774006 -16482577 + (CA)n Simple_repeat Simple_repeat 1 46 0 827 219 16 6 chr2 236774346 236774529 -16482054 + MIR SINE MIR 1 185 -77 183 275 0 0 chr2 236776217 236776257 -16480326 - L2 LINE L2 -86 3186 3147 233 333 71 16 chr2 236780126 236780252 -16476331 - L2 LINE L2 -181 3091 2959 388 318 60 26 chr2 236780515 236780888 -16475695 + L2 LINE L2 1852 2299 -1015 271 129 387 0 chr2 236781123 236781185 -16475398 - AluSc SINE Alu -3 296 211 261 402 74 8 chr2 236781347 236781469 -16475114 + L2 LINE L2 3141 3270 -2 2040 121 45 18 chr2 236781509 236781866 -16474717 - L1MA4 LINE L1 -229 5943 5646 1963 135 0 7 chr2 236782394 236782683 -16473900 + AluSg SINE Alu 1 287 -23 414 0 0 0 chr2 236782683 236782729 -16473854 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 477 374 177 25 chr2 236783519 236783746 -16472837 - L2 LINE L2 -345 2969 2778 1893 135 66 36 chr2 236783746 236784110 -16472473 - THE1C LTR MaLR 0 375 1 477 374 177 25 chr2 236784110 236784900 -16471683 - L2 LINE L2 -536 2778 1798 21 0 0 0 chr2 236786677 236786698 -16469885 + AT_rich Low_complexity Low_complexity 1 21 0 407 286 112 14 chr2 236787373 236787667 -16468916 - HAL1 LINE L1 -17 2490 2168 386 306 87 77 chr2 236787693 236788059 -16468524 - HAL1 LINE L1 -443 2064 1695 259 366 32 16 chr2 236788059 236788182 -16468401 + MER5C DNA MER1_type 1 125 -199 7874 196 47 8 chr2 236789508 236791352 -16465231 - L1 LINE L1 -1417 4729 2813 215 137 0 82 chr2 236791444 236791517 -16465066 + MER5C DNA MER1_type 185 251 -73 763 251 62 70 chr2 236791605 236791963 -16464620 - HAL1 LINE L1 -837 1670 1316 233 336 0 45 chr2 236791978 236792088 -16464495 - HAL1 LINE L1 -1603 904 800 508 273 35 41 chr2 236792097 236793021 -16463562 + L1MC/D LINE L1 3952 4985 -1161 297 265 10 61 chr2 236793112 236793210 -16463373 - MIR SINE MIR -50 212 120 280 175 206 0 chr2 236794180 236794243 -16462340 - MER102a DNA MER1_type -6 324 249 318 268 222 29 chr2 236794568 236794811 -16461772 - L2 LINE L2 -11 3302 3013 317 222 37 56 chr2 236794939 236795047 -16461536 - MER103 DNA DNA -59 107 2 416 310 58 44 chr2 236795475 236795809 -16460774 + L1MC/D LINE L1 5123 5467 -743 210 143 0 0 chr2 236795885 236795920 -16460663 + (CATATA)n Simple_repeat Simple_repeat 2 36 0 343 268 100 29 chr2 236796245 236796484 -16460099 - L1M4 LINE L1 -1342 4804 4549 21 57 0 0 chr2 236796630 236796665 -16459918 + AT_rich Low_complexity Low_complexity 1 35 0 232 252 102 54 chr2 236796989 236797136 -16459447 - L1M4 LINE L1 -2202 3944 3791 211 172 17 17 chr2 236798454 236798512 -16458071 + (TATATG)n Simple_repeat Simple_repeat 5 62 0 513 32 0 0 chr2 236801022 236801085 -16455498 + (TG)n Simple_repeat Simple_repeat 2 64 0 808 250 60 14 chr2 236801467 236801683 -16454900 + MIR SINE MIR 35 260 -2 758 320 25 20 chr2 236803586 236803830 -16452753 - MIR SINE MIR -11 251 7 366 286 50 25 chr2 236803929 236804090 -16452493 - L2 LINE L2 -1 3312 3148 2469 71 0 0 chr2 236804479 236804776 -16451807 - AluY SINE Alu -14 297 1 231 343 0 0 chr2 236804784 236804854 -16451729 + MIR3 SINE MIR 129 198 -10 845 230 56 33 chr2 236805270 236805483 -16451100 + MER20 DNA MER1_type 2 219 0 882 236 94 26 chr2 236805890 236806123 -16450460 + MIR SINE MIR 14 262 0 567 292 58 93 chr2 236809544 236810041 -16446542 - L2 LINE L2 -1 3312 2833 235 301 14 0 chr2 236810279 236810352 -16446231 + MIR SINE MIR 78 151 -111 1049 266 140 46 chr2 236810353 236811274 -16445309 + L1M4 LINE L1 3689 4696 -1450 1883 145 11 0 chr2 236811314 236811597 -16444986 + AluSx SINE Alu 12 297 -15 362 265 19 133 chr2 236811865 236811960 -16444623 + L1M4 LINE L1 4847 4951 -1195 2038 176 70 13 chr2 236811960 236812357 -16444226 + MSTB LTR MaLR 5 424 -2 362 265 19 133 chr2 236812357 236812422 -16444161 + L1M4 LINE L1 4951 4968 -1178 2130 91 36 26 chr2 236812422 236812730 -16443853 + AluY SINE Alu 1 311 0 362 265 19 133 chr2 236812730 236812832 -16443751 + L1M4 LINE L1 4968 5080 -1066 510 308 47 19 chr2 236812833 236813047 -16443536 + MLT2F LTR ERVL 111 330 -333 3802 268 88 19 chr2 236813073 236813398 -16443185 + ERVL LTR ERVL 2275 2576 -3188 276 77 0 0 chr2 236813398 236813437 -16443146 + (TG)n Simple_repeat Simple_repeat 2 40 0 3802 268 88 19 chr2 236813437 236815001 -16441582 + ERVL LTR ERVL 2576 4362 -1402 1222 102 59 0 chr2 236815001 236815025 -16441558 - MER107 DNA MER1_type 0 197 176 369 0 0 0 chr2 236815025 236815066 -16441517 + (TTG)n Simple_repeat Simple_repeat 2 42 0 1222 102 59 0 chr2 236815066 236815227 -16441356 - MER107 DNA MER1_type -21 176 1 3802 268 88 19 chr2 236815227 236815332 -16441251 + ERVL LTR ERVL 4362 4458 -1306 1169 276 95 16 chr2 236815497 236815866 -16440717 + ERVL LTR ERVL 4494 4891 -873 686 231 0 24 chr2 236815882 236816051 -16440532 + MER3 DNA MER1_type 38 202 -7 1173 274 74 0 chr2 236816109 236816448 -16440135 + ERVL LTR ERVL 4940 5303 -461 5382 162 26 8 chr2 236816462 236817801 -16438782 + L1MA7 LINE L1 4918 6282 -9 271 279 33 49 chr2 236818196 236818318 -16438265 + MLT2F LTR ERVL 1 120 -543 534 330 26 38 chr2 236818361 236818625 -16437958 + MLT2F LTR ERVL 401 661 -2 1352 259 78 31 chr2 236818625 236819174 -16437409 + L1ME3 LINE L1 5571 6145 -17 308 269 37 46 chr2 236819598 236819706 -16436877 + L2 LINE L2 3173 3279 -34 538 347 39 10 chr2 236821449 236821750 -16434833 - L2 LINE L2 -230 3042 2731 2149 127 0 9 chr2 236822347 236822662 -16433921 + AluSx SINE Alu 1 312 0 248 217 165 9 chr2 236822938 236823053 -16433530 - L1ME LINE L1 -284 5837 5705 320 217 0 12 chr2 236823148 236823231 -16433352 + (CATATA)n Simple_repeat Simple_repeat 1 82 0 498 204 87 0 chr2 236823232 236823335 -16433248 - FRAM SINE Alu -11 165 54 2221 121 0 0 chr2 236823712 236824018 -16432565 + AluSx SINE Alu 1 306 -6 369 0 0 0 chr2 236824018 236824059 -16432524 + (CA)n Simple_repeat Simple_repeat 2 42 0 380 296 184 29 chr2 236824277 236824483 -16432100 + MIR SINE MIR 22 259 -3 279 314 0 0 chr2 236824638 236824708 -16431875 + polypurine Low_complexity Low_complexity 1 70 0 21 0 0 0 chr2 236826157 236826178 -16430405 + AT_rich Low_complexity Low_complexity 1 21 0 1548 157 25 21 chr2 236826192 236826472 -16430111 - AluJo SINE Alu -30 282 2 592 206 43 0 chr2 236826700 236826841 -16429742 - L1MA9 LINE L1 0 6312 6166 2416 96 0 3 chr2 236827802 236828115 -16428468 - AluSx SINE Alu 0 312 1 207 0 0 0 chr2 236828944 236828967 -16427616 + (T)n Simple_repeat Simple_repeat 1 23 0 220 194 28 28 chr2 236829161 236829233 -16427350 + (TATATG)n Simple_repeat Simple_repeat 3 74 0 342 0 0 0 chr2 236829817 236829855 -16426728 + (CA)n Simple_repeat Simple_repeat 2 39 0 443 305 43 7 chr2 236830332 236830473 -16426110 + MIR SINE MIR 98 243 -19 290 274 20 29 chr2 236830490 236830592 -16425991 - MIR SINE MIR 0 262 162 1405 119 30 0 chr2 236830878 236831080 -16425503 - AluSg/x SINE Alu -3 309 102 2037 177 5 3 chr2 236831485 236831863 -16424720 - L1MC3 LINE L1 -2 7783 7405 1401 178 8 0 chr2 236831869 236832122 -16424461 + L1MC3 LINE L1 7201 7455 -330 234 0 0 0 chr2 236832125 236832151 -16424432 + (CAA)n Simple_repeat Simple_repeat 2 27 0 431 165 38 0 chr2 236832160 236832239 -16424344 + L1MC3 LINE L1 7031 7112 -673 654 172 97 0 chr2 236832241 236832375 -16424208 - L1MC3 LINE L1 -776 7009 6863 4536 194 26 20 chr2 236832576 236832612 -16423971 - L1MB2 LINE L1 -16 6155 6121 2298 110 0 0 chr2 236832612 236832921 -16423662 - AluSg SINE Alu -1 309 1 4536 194 26 20 chr2 236832921 236834708 -16421875 - L1MB2 LINE L1 -50 6121 4326 1459 134 0 0 chr2 236834731 236834932 -16421651 - AluSq SINE Alu -94 219 19 510 308 53 26 chr2 236835311 236835538 -16421045 + MIR SINE MIR 17 249 -13 451 181 129 0 chr2 236836965 236837081 -16419502 + L1MC3 LINE L1 6879 7009 -776 431 165 38 0 chr2 236837083 236837162 -16419421 - L1MC3 LINE L1 -673 7112 7031 234 0 0 0 chr2 236837171 236837197 -16419386 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1366 186 8 0 chr2 236837200 236837453 -16419130 - L1MC3 LINE L1 -330 7455 7201 2028 180 5 3 chr2 236837459 236837837 -16418746 + L1MC3 LINE L1 7405 7783 -2 229 177 0 65 chr2 236839333 236839395 -16417188 + A-rich Low_complexity Low_complexity 5 62 0 319 280 109 33 chr2 236839609 236839820 -16416763 + MIR SINE MIR 34 260 -2 22 35 0 0 chr2 236841771 236841800 -16414783 + AT_rich Low_complexity Low_complexity 1 29 0 410 280 42 35 chr2 236842456 236842599 -16413984 - MIR3 SINE MIR -24 184 41 259 323 21 21 chr2 236842678 236842771 -16413812 - MIR SINE MIR -62 146 54 428 260 0 32 chr2 236842900 236843023 -16413560 - MER103 DNA DNA -46 120 2 257 367 60 27 chr2 236843093 236843243 -16413340 + MIR3 SINE MIR 31 185 -23 239 192 0 19 chr2 236843288 236843340 -16413243 + (CATA)n Simple_repeat Simple_repeat 2 52 0 472 228 110 15 chr2 236843458 236843594 -16412989 - MLT1J2 LTR MaLR -296 154 6 265 316 35 52 chr2 236843796 236843886 -16412697 + MIR SINE MIR 50 137 -125 2238 112 20 0 chr2 236843886 236844191 -16412392 + AluSx SINE Alu 1 311 -1 265 316 35 52 chr2 236844191 236844274 -16412309 + MIR SINE MIR 137 220 -42 290 274 20 29 chr2 236844477 236844579 -16412004 + MIR SINE MIR 162 262 0 443 305 43 7 chr2 236844596 236844737 -16411846 - MIR SINE MIR -19 243 98 306 0 0 0 chr2 236845214 236845248 -16411335 + (TG)n Simple_repeat Simple_repeat 2 35 0 220 194 28 28 chr2 236845832 236845904 -16410679 + (CATATA)n Simple_repeat Simple_repeat 3 74 0 207 0 0 0 chr2 236846098 236846121 -16410462 + (A)n Simple_repeat Simple_repeat 1 23 0 2338 93 6 3 chr2 236846952 236847263 -16409320 + AluSx SINE Alu 1 312 0 411 321 6 124 chr2 236848878 236849224 -16407359 - L2 LINE L2 0 3272 2968 440 290 175 18 chr2 236849480 236849766 -16406817 - MLT1H LTR MaLR -16 533 203 336 64 0 0 chr2 236850334 236850381 -16406202 + (CA)n Simple_repeat Simple_repeat 2 48 0 238 304 223 0 chr2 236850401 236850513 -16406070 - MIR SINE MIR -108 154 18 261 0 0 0 chr2 236851016 236851045 -16405538 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 332 300 200 0 chr2 236851049 236851149 -16405434 - L2 LINE L2 -17 3255 3136 409 300 203 13 chr2 236852319 236852556 -16404027 + LTR33 LTR ERVL 6 287 -234 2286 102 0 3 chr2 236852685 236852988 -16403595 + AluSc SINE Alu 1 302 -7 671 241 55 41 chr2 236853429 236853550 -16403033 + MER58A DNA MER1_type 2 129 -2291 2230 108 0 7 chr2 236853550 236853855 -16402728 - AluSx SINE Alu -9 303 1 671 241 55 41 chr2 236853855 236853953 -16402630 + MER58A DNA MER1_type 129 224 0 616 288 46 82 chr2 236854662 236855137 -16401446 + MLT1K LTR MaLR 131 588 0 251 324 79 22 chr2 236855366 236855505 -16401078 - L2 LINE L2 -3 3310 3164 570 93 0 0 chr2 236855532 236855618 -16400965 + (GGGAA)n Simple_repeat Simple_repeat 2 87 0 613 217 85 11 chr2 236856008 236856197 -16400386 + L1MD3 LINE L1 7793 7995 0 611 303 72 39 chr2 236856250 236856583 -16400000 - L2 LINE L2 -527 2787 2444 260 185 74 0 chr2 236857062 236857116 -16399467 + L2 LINE L2 3255 3312 -1 21 0 0 0 chr2 236858837 236858858 -16397725 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 236858991 236859012 -16397571 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr2 236859094 236859124 -16397459 + AT_rich Low_complexity Low_complexity 1 30 0 317 285 89 47 chr2 236859283 236859497 -16397086 + L1ME LINE L1 5175 5397 -749 476 310 89 52 chr2 236859521 236859869 -16396714 + L1ME LINE L1 5460 5820 -301 243 0 0 0 chr2 236859919 236859946 -16396637 + (A)n Simple_repeat Simple_repeat 1 27 0 518 286 60 6 chr2 236860746 236860914 -16395669 - MER20 DNA MER1_type -1 218 42 2190 135 52 9 chr2 236861593 236861940 -16394643 - THE1B LTR MaLR -2 362 1 340 315 59 5 chr2 236861986 236862208 -16394375 + MLT1L LTR MaLR 360 593 -22 1674 170 17 72 chr2 236862450 236862855 -16393728 + MLT1B LTR MaLR 8 390 0 2282 106 3 3 chr2 236863066 236863368 -16393215 + AluSp SINE Alu 1 302 -11 3842 59 36 42 chr2 236863384 236864435 -16392148 - MER11A LTR ERVK -1 1265 1 574 321 116 44 chr2 236864440 236864923 -16391660 + L2 LINE L2 2516 3069 -244 1710 93 62 0 chr2 236864923 236865181 -16391402 - L1PB1 LINE L1 0 6151 5878 574 321 116 44 chr2 236865181 236865445 -16391138 + L2 LINE L2 3069 3313 0 1317 129 0 0 chr2 236865730 236865916 -16390667 - AluSq SINE Alu -2 311 126 1948 86 11 7 chr2 236866288 236866568 -16390015 - AluY SINE Alu -30 281 1 207 114 0 0 chr2 236867155 236867190 -16389393 + (TG)n Simple_repeat Simple_repeat 2 36 0 207 69 0 0 chr2 236868435 236868464 -16388119 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 2338 188 67 10 chr2 236868811 236869316 -16387267 + MLT2B3 LTR ERVL 1 534 -20 2114 107 0 0 chr2 236870580 236870861 -16385722 + AluSx SINE Alu 26 306 -6 218 303 136 19 chr2 236870933 236871095 -16385488 - L2 LINE L2 -176 3096 2916 2488 14 3 7 chr2 236871295 236871580 -16385003 - AluYb8 SINE Alu -34 284 1 1371 215 130 8 chr2 236872017 236872370 -16384213 - MSTD LTR MaLR 0 396 1 180 0 0 0 chr2 236873591 236873611 -16382972 + (CA)n Simple_repeat Simple_repeat 1 20 0 22 0 0 0 chr2 236874870 236874892 -16381691 + AT_rich Low_complexity Low_complexity 1 22 0 1575 191 50 8 chr2 236875492 236875874 -16380709 - L1MC3 LINE L1 -9 7776 7379 * 1982 256 30 45 chr2 236875870 236876397 -16380186 - L1M4 LINE L1 -1224 4922 4389 1711 171 7 0 chr2 236876397 236876678 -16379905 - AluJb SINE Alu -20 292 10 1982 256 30 45 chr2 236876678 236876903 -16379680 - L1M4 LINE L1 -1757 4389 4181 1786 166 0 24 chr2 236876903 236877198 -16379385 - AluSx SINE Alu -24 288 1 1982 256 30 45 chr2 236877198 236877296 -16379287 - L1M4 LINE L1 -1965 4181 4083 1533 153 36 7 chr2 236877305 236877612 -16378971 - Ricksha_b DNA DNA -9 1637 1322 711 216 0 53 chr2 236877612 236877783 -16378800 + AluJo SINE Alu 81 242 -70 189 74 0 0 chr2 236877839 236877866 -16378717 + (TA)n Simple_repeat Simple_repeat 2 28 0 2194 149 76 0 chr2 236877871 236878268 -16378315 - Ricksha_b DNA DNA -390 864 438 4775 191 26 28 chr2 236878954 236880096 -16376487 + L1MC3 LINE L1 6642 7781 -4 21 36 0 0 chr2 236880464 236880492 -16376091 + AT_rich Low_complexity Low_complexity 1 28 0 679 303 124 63 chr2 236880565 236881140 -16375443 - L2 LINE L2 -239 3074 2452 1825 146 62 14 chr2 236881144 236881270 -16375313 + AluJb SINE Alu 1 119 -193 453 66 0 0 chr2 236881270 236881331 -16375252 + (CA)n Simple_repeat Simple_repeat 2 62 0 1825 146 62 14 chr2 236881331 236881492 -16375091 + AluJb SINE Alu 119 302 -10 24 0 0 0 chr2 236882028 236882052 -16374531 + AT_rich Low_complexity Low_complexity 1 24 0 263 356 77 21 chr2 236882059 236882292 -16374291 - Tigger8 DNA MER2_type -419 247 2 2272 72 0 4 chr2 236882351 236882658 -16373925 - AluY SINE Alu 0 308 3 210 347 105 8 chr2 236882771 236882895 -16373688 + MIR SINE MIR 122 257 -5 300 229 0 73 chr2 236884039 236884135 -16372448 + L1MC4 LINE L1 6615 6703 -1339 306 0 0 0 chr2 236884138 236884172 -16372411 + (TG)n Simple_repeat Simple_repeat 1 34 0 2861 85 17 2 chr2 236884172 236884574 -16372009 - MLT2A2 LTR ERVL -45 408 1 911 254 18 0 chr2 236886430 236886650 -16369933 - MER58A DNA MER1_type 0 224 1 228 328 33 33 chr2 236889530 236889652 -16366931 + MIR SINE MIR 10 131 -131 1238 226 46 19 chr2 236890751 236891074 -16365509 + Tigger7 DNA MER2_type 10 341 -392 633 184 21 7 chr2 236891072 236891213 -16365370 + Tigger7 DNA MER2_type 2439 2581 -6 * 557 284 66 18 chr2 236892058 236892392 -16364191 + L1ME4a LINE L1 5534 5883 -238 526 153 0 0 chr2 236892449 236892534 -16364049 + MLT1C LTR MaLR 337 421 -46 629 121 57 93 chr2 236893503 236893566 -16363017 - MLT1A1 LTR MaLR 0 365 301 1628 114 0 179 chr2 236893566 236893924 -16362659 - AluSx SINE Alu -8 294 1 629 121 57 93 chr2 236893924 236894000 -16362583 - MLT1A1 LTR MaLR -64 301 231 583 202 89 84 chr2 236894182 236894385 -16362198 - MLT1A1 LTR MaLR -161 204 1 190 244 13 13 chr2 236894399 236894477 -16362106 + T-rich Low_complexity Low_complexity 3 80 0 21 0 0 0 chr2 236894557 236894578 -16362005 + AT_rich Low_complexity Low_complexity 1 21 0 265 202 173 48 chr2 236894946 236895050 -16361533 + L3b LINE CR1 1259 1375 -208 392 290 90 14 chr2 236895538 236895723 -16360860 - MIR SINE MIR -63 145 5 688 221 67 31 chr2 236895907 236896102 -16360481 + MIR SINE MIR 61 262 0 526 213 16 8 chr2 236896472 236896599 -16359984 + AluYb8 SINE Alu 186 313 -5 389 345 61 0 chr2 236897021 236897186 -16359397 + MIR SINE MIR 50 224 -38 327 314 112 0 chr2 236897403 236897690 -16358893 + L1ME4a LINE L1 5585 5903 -218 246 81 0 0 chr2 236897750 236897787 -16358796 + (TG)n Simple_repeat Simple_repeat 2 38 0 216 230 20 10 chr2 236898006 236898106 -16358477 + CT-rich Low_complexity Low_complexity 1 101 0 199 319 43 43 chr2 236898768 236898884 -16357699 + MIR SINE MIR 82 197 -65 919 266 4 80 chr2 236899036 236899311 -16357272 - MIR SINE MIR -5 257 4 184 227 0 45 chr2 236901107 236901151 -16355432 - L2 LINE L2 -1 3271 3230 643 256 153 0 chr2 236901578 236901793 -16354790 + MIR SINE MIR 13 260 -2 530 201 18 12 chr2 236901876 236902040 -16354543 + CT-rich Low_complexity Low_complexity 2 166 0 371 169 0 13 chr2 236902098 236902175 -16354408 + CT-rich Low_complexity Low_complexity 2 77 0 1751 148 0 69 chr2 236902670 236902975 -16353608 + AluSx SINE Alu 1 284 -28 443 18 0 18 chr2 236902975 236903032 -16353551 + (CCAA)n Simple_repeat Simple_repeat 2 57 0 2049 120 3 0 chr2 236904707 236904990 -16351593 - AluSq SINE Alu -28 285 2 1242 237 65 37 chr2 236906183 236906617 -16349966 - LTR16A1 LTR ERVL 0 457 12 257 322 20 7 chr2 236908398 236908550 -16348033 + MER103 DNA DNA 8 161 -5 23 54 0 0 chr2 236908909 236908946 -16347637 + AT_rich Low_complexity Low_complexity 1 37 0 1151 214 94 115 chr2 236910235 236911142 -16345441 - MLT1E2 LTR MaLR -26 600 80 257 289 113 38 chr2 236910643 236910717 -16345866 - MLT2C1 LTR ERVL -183 214 147 * 2043 128 29 32 chr2 236910717 236911093 -16345490 - THE1C LTR MaLR 0 375 1 257 289 113 38 chr2 236911093 236911177 -16345406 - MLT2C1 LTR ERVL -250 147 44 195 264 0 121 chr2 236911306 236911397 -16345186 - L2 LINE L2 0 3272 3193 689 162 32 45 chr2 236911403 236911557 -16345026 + MER3 DNA MER1_type 42 193 -16 287 203 139 0 chr2 236911535 236911614 -16344969 - MER3 DNA MER1_type -119 90 1 * 938 246 9 9 chr2 236911669 236911889 -16344694 - MER58A DNA MER1_type -2 222 3 1146 168 81 89 chr2 236912028 236912421 -16344162 - MLT1B LTR MaLR 0 390 1 312 326 83 8 chr2 236912437 236912569 -16344014 - MER5B DNA MER1_type 0 178 37 2503 118 6 3 chr2 236912570 236912933 -16343650 - THE1B LTR MaLR 0 364 1 9981 127 37 7 chr2 236912937 236914465 -16342118 - THE1B-int LTR MaLR -4 1576 3 2464 125 8 3 chr2 236914469 236914829 -16341754 - THE1B LTR MaLR -2 362 1 2079 113 7 7 chr2 236915828 236916121 -16340462 + AluSx SINE Alu 1 293 -19 4918 181 15 4 chr2 236916183 236917220 -16339363 - L1MD1 LINE L1 -8 6628 5580 225 292 0 0 chr2 236917229 236917294 -16339289 + L1M4 LINE L1 3967 4031 -2115 * 1410 262 54 17 chr2 236917292 236917945 -16338638 - L1MD1 LINE L1 -2599 3941 3265 1612 189 83 6 chr2 236917968 236918307 -16338276 + MLT1A1 LTR MaLR 1 365 0 252 200 55 0 chr2 236918344 236918399 -16338184 + (TATATG)n Simple_repeat Simple_repeat 5 62 0 729 154 160 0 chr2 236918402 236918590 -16337993 - L1MD1 LINE L1 -4206 2334 2117 297 0 0 0 chr2 236918631 236918664 -16337919 + (CA)n Simple_repeat Simple_repeat 2 34 0 571 269 22 62 chr2 236919161 236919388 -16337195 - MER20 DNA MER1_type -1 218 1 916 114 0 0 chr2 236920022 236920154 -16336429 + AluSg/x SINE Alu 179 310 -2 1020 240 57 85 chr2 236923634 236924104 -16332479 - MLT1C LTR MaLR 0 467 11 481 200 78 39 chr2 236924655 236924835 -16331748 - MER53 DNA DNA -2 187 1 258 245 0 0 chr2 236924883 236924981 -16331602 + GA-rich Low_complexity Low_complexity 1 98 0 180 0 0 0 chr2 236925506 236925526 -16331057 + (TC)n Simple_repeat Simple_repeat 1 20 0 180 0 0 0 chr2 236925525 236925545 -16331038 + (CA)n Simple_repeat Simple_repeat 1 20 0 337 312 151 5 chr2 236925563 236925768 -16330815 - MLT1K LTR MaLR -196 392 158 219 323 0 15 chr2 236926198 236926263 -16330320 - L2 LINE L2 -4 3268 3205 719 283 24 65 chr2 236926437 236926808 -16329775 - MLT1I LTR MaLR 0 409 54 191 306 61 41 chr2 236926968 236927066 -16329517 - MIR SINE MIR -94 168 69 245 293 0 0 chr2 236927454 236927512 -16329071 + MIR3 SINE MIR 111 168 -40 237 290 101 14 chr2 236928561 236928599 -16327984 - MIR SINE MIR 0 262 229 2344 171 18 34 chr2 236928599 236929039 -16327544 - Tigger2a DNA MER2_type -1 433 1 237 290 101 14 chr2 236929039 236929138 -16327445 - MIR SINE MIR -33 229 113 274 322 88 66 chr2 236929322 236929642 -16326941 - L2 LINE L2 -50 3263 2937 233 341 111 16 chr2 236930936 236931062 -16325521 - L3 LINE CR1 -1 1576 1439 2435 132 16 8 chr2 236931390 236931762 -16324821 - THE1C LTR MaLR 0 375 1 345 286 19 19 chr2 236931807 236931912 -16324671 - MER81 DNA DNA -2 112 8 711 162 0 0 chr2 236932190 236932307 -16324276 + MLT1A1 LTR MaLR 248 364 -1 589 364 206 16 chr2 236932442 236933956 -16322627 + L2 LINE L2 1214 3010 -262 222 263 131 31 chr2 236934010 236934170 -16322413 + L2 LINE L2 3137 3312 -1 22 0 0 0 chr2 236934542 236934564 -16322019 + AT_rich Low_complexity Low_complexity 1 22 0 318 315 152 2 chr2 236934577 236934759 -16321824 - LTR33 LTR ERVL -85 436 225 297 51 0 0 chr2 236935371 236935410 -16321173 + (CAA)n Simple_repeat Simple_repeat 1 39 0 644 227 0 0 chr2 236935763 236935917 -16320666 - L1MA4 LINE L1 -5 6295 6142 226 198 0 70 chr2 236936804 236936890 -16319693 + GA-rich Low_complexity Low_complexity 3 82 0 229 342 40 0 chr2 236938019 236938095 -16318488 - L2 LINE L2 -2 3270 3192 18918 71 10 6 chr2 236938198 236941580 -16315003 - L1PA6 LINE L1 -1 6153 2746 472 254 68 57 chr2 236941668 236941750 -16314833 + MIR SINE MIR 82 162 -100 1904 185 74 10 chr2 236941750 236942156 -16314427 + MSTB1 LTR MaLR 1 432 0 472 254 68 57 chr2 236942156 236942250 -16314333 + MIR SINE MIR 162 260 -2 2003 319 36 20 chr2 236944681 236945513 -16311070 + HERV16 LTR ERVL 2249 3093 -1903 488 330 5 5 chr2 236945818 236946036 -16310547 + HERV16 LTR ERVL 4708 4925 -71 904 245 48 82 chr2 236946102 236946580 -16310003 + LTR16B LTR ERVL 3 464 0 464 220 0 0 chr2 236946684 236946775 -16309808 + MER45 DNA AcHobo 2 92 -948 1924 151 108 48 chr2 236946776 236946990 -16309593 - MLT1C LTR MaLR -4 463 263 2492 108 16 3 chr2 236946990 236947360 -16309223 + THE1C LTR MaLR 1 375 0 2229 115 0 6 chr2 236947367 236947681 -16308902 + AluSp SINE Alu 1 312 -1 1924 151 108 48 chr2 236947681 236947895 -16308688 - MLT1C LTR MaLR -209 258 1 2144 123 7 3 chr2 236948135 236948444 -16308139 - AluSq SINE Alu -2 311 2 1521 166 27 7 chr2 236948446 236948528 -16308055 + MLT1B LTR MaLR 84 163 -227 966 155 34 29 chr2 236948528 236948734 -16307849 + L1MA10 LINE L1 6128 6334 0 1521 166 27 7 chr2 236948734 236948952 -16307631 + MLT1B LTR MaLR 163 390 0 226 286 76 46 chr2 236949042 236949280 -16307303 - HAL1b LINE L1 -773 575 331 2753 195 6 2 chr2 236949287 236949800 -16306783 - MLT2B2 LTR ERVL 0 515 1 2134 125 0 0 chr2 236949844 236950132 -16306451 + AluSx SINE Alu 17 304 -8 364 369 33 23 chr2 236950141 236950355 -16306228 - HAL1 LINE L1 -1138 1369 1154 21 0 0 0 chr2 236950804 236950825 -16305758 + AT_rich Low_complexity Low_complexity 1 21 0 332 294 80 85 chr2 236951568 236951769 -16304814 + MIR SINE MIR 30 229 -33 260 147 29 59 chr2 236951722 236951790 -16304793 - MIR SINE MIR -1 261 196 * 1484 179 46 10 chr2 236951967 236952269 -16304314 - Ricksha DNA DNA -1733 313 1 1747 270 10 22 chr2 236952283 236952958 -16303625 - L1M4 LINE L1 -2065 4081 3415 * 2170 180 57 134 chr2 236952954 236954073 -16302510 - L1MCb LINE L1 -4892 1672 425 269 263 0 13 chr2 236954133 236954209 -16302374 + L1MCb LINE L1 630 704 -5341 637 196 65 5 chr2 236954223 236954407 -16302176 - L1 LINE L1 -801 5345 5151 471 199 78 10 chr2 236955185 236955315 -16301268 - L1P5 LINE L1 -369 5785 5653 21 36 0 0 chr2 236955315 236955343 -16301240 + AT_rich Low_complexity Low_complexity 1 28 0 215 239 0 23 chr2 236955343 236955431 -16301152 + (TATAA)n Simple_repeat Simple_repeat 5 90 0 2400 150 50 3 chr2 236955431 236955927 -16300656 - L1M2 LINE L1 -634 5678 5165 777 267 55 14 chr2 236956082 236956299 -16300284 - MIR SINE MIR -36 226 1 216 67 0 0 chr2 236957167 236957197 -16299386 + (TG)n Simple_repeat Simple_repeat 1 30 0 383 159 14 0 chr2 236957583 236957652 -16298931 + MSTA LTR MaLR 357 426 -2 234 426 25 19 chr2 236958019 236958181 -16298402 + L2 LINE L2 3106 3268 -4 1498 154 4 11 chr2 236958762 236959035 -16297548 - L1PB1 LINE L1 0 6151 5881 23 86 0 0 chr2 236959044 236959102 -16297481 + AT_rich Low_complexity Low_complexity 1 58 0 2046 99 27 3 chr2 236959807 236959821 -16296762 - AluSq SINE Alu -12 301 289 663 13 0 0 chr2 236959821 236959897 -16296686 + (TTATG)n Simple_repeat Simple_repeat 2 77 0 2046 99 27 3 chr2 236959897 236960174 -16296409 - AluSq SINE Alu -24 289 3 1389 153 0 0 chr2 236960176 236960402 -16296181 - AluSg/x SINE Alu 0 306 81 261 300 100 0 chr2 236961087 236961227 -16295356 - L1ME LINE L1 -290 5876 5723 2926 44 0 3 chr2 236961227 236961589 -16294994 - L1PA4 LINE L1 0 6155 5795 357 24 0 0 chr2 236961689 236961731 -16294852 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 225 360 112 0 chr2 236962899 236962988 -16293595 - L2 LINE L2 -29 3243 3145 298 363 52 69 chr2 236963318 236963759 -16292824 - L2 LINE L2 -428 2886 2456 708 219 85 0 chr2 236963759 236963923 -16292660 - MER45A DNA AcHobo 0 178 1 298 363 52 69 chr2 236963923 236964073 -16292510 - L2 LINE L2 -858 2456 2305 383 308 139 42 chr2 236964076 236964313 -16292270 + MIR SINE MIR 3 262 0 2400 85 3 0 chr2 236965573 236965880 -16290703 + AluY SINE Alu 1 308 -3 690 271 49 49 chr2 236965959 236966243 -16290340 + L2 LINE L2 3030 3313 0 683 181 64 54 chr2 236966729 236966933 -16289650 + MER3 DNA MER1_type 2 207 -2 1492 177 65 8 chr2 236967439 236967699 -16288884 - AluSx SINE Alu -3 309 35 225 357 97 22 chr2 236967726 236967995 -16288588 + L2 LINE L2 1113 1401 -1913 291 275 256 15 chr2 236968037 236968310 -16288273 + MLT1H LTR MaLR 12 350 -199 1554 335 121 30 chr2 236968427 236968568 -16288015 + L2 LINE L2 1567 1694 -1620 1918 158 0 7 chr2 236968568 236968871 -16287712 + AluJb SINE Alu 12 312 0 1554 335 121 30 chr2 236968871 236970019 -16286564 + L2 LINE L2 1694 2974 -340 946 303 27 43 chr2 236970184 236970814 -16285769 - L2 LINE L2 0 3313 2703 27 0 0 0 chr2 236971095 236971122 -16285461 + AT_rich Low_complexity Low_complexity 1 27 0 1224 211 14 22 chr2 236971164 236971439 -16285144 + MLT2D LTR ERVL 1 273 -141 452 171 120 0 chr2 236971526 236971643 -16284940 + L1MDa LINE L1 1322 1452 -5088 597 158 0 158 chr2 236971647 236971811 -16284772 + MLT2D LTR ERVL 277 414 0 341 298 32 90 chr2 236972031 236972310 -16284273 + L1MEc LINE L1 107 369 -6027 3930 226 211 23 chr2 236972645 236973881 -16282702 + L1ME2 LINE L1 19 1487 -5053 1343 230 62 13 chr2 236973869 236974319 -16282264 + L1ME2 LINE L1 5611 6081 -477 * 1413 249 51 19 chr2 236974452 236974922 -16281661 + L1ME2 LINE L1 6064 6548 -10 434 167 0 0 chr2 236974934 236975012 -16281571 + L1MA9 LINE L1 6202 6279 -33 1852 158 3 3 chr2 236975414 236975711 -16280872 + AluSx SINE Alu 1 297 -15 288 370 76 0 chr2 236976179 236976363 -16280220 - MIR SINE MIR -14 248 51 252 0 0 0 chr2 236976496 236976524 -16280059 + (CA)n Simple_repeat Simple_repeat 2 29 0 798 299 141 53 chr2 236976691 236977203 -16279380 + LTR67 LTR ERVL 1 557 0 226 303 22 22 chr2 236978363 236978452 -16278131 - L2 LINE L2 -5 3267 3179 335 331 113 35 chr2 236978664 236979137 -16277446 - L2 LINE L2 -145 3168 2658 343 285 86 34 chr2 236979250 236979654 -16276929 - ERVL LTR ERVL -2046 3718 3247 544 267 75 40 chr2 236979692 236980069 -16276514 - MLT1J1 LTR MaLR 0 450 15 729 314 26 52 chr2 236980474 236980818 -16275765 - LTR16B LTR ERVL -128 336 2 277 345 138 34 chr2 236981298 236981678 -16274905 + L2 LINE L2 2369 2837 -435 1872 155 70 14 chr2 236981678 236982033 -16274550 - THE1C LTR MaLR 0 375 1 277 345 138 34 chr2 236982033 236982268 -16274315 + L2 LINE L2 2837 3046 -226 229 316 82 0 chr2 236982915 236983013 -16273570 - MIR SINE MIR -86 176 71 705 265 68 9 chr2 236983163 236983382 -16273201 + MIR SINE MIR 13 244 -18 270 385 11 34 chr2 236985229 236985408 -16271175 + L2 LINE L2 2914 3088 -184 201 147 0 0 chr2 236985489 236985523 -16271060 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 21 0 0 0 chr2 236985612 236985633 -16270950 + AT_rich Low_complexity Low_complexity 1 21 0 270 229 19 173 chr2 236986557 236986771 -16269812 - L2 LINE L2 0 3313 3133 2241 109 0 3 chr2 236987287 236987590 -16268993 + AluSx SINE Alu 1 302 -10 240 348 62 9 chr2 236987698 236987810 -16268773 - MIR SINE MIR -80 182 65 367 358 128 31 chr2 236987848 236988175 -16268408 - L2 LINE L2 -4 3309 2951 21 36 0 0 chr2 236989145 236989173 -16267410 + AT_rich Low_complexity Low_complexity 1 28 0 2325 105 124 8 chr2 236990871 236991251 -16265332 - MSTA LTR MaLR -4 424 1 1957 63 16 0 chr2 236991415 236991668 -16264915 - L1PA7 LINE L1 -2 6152 5896 213 39 0 0 chr2 236991859 236991885 -16264698 + (T)n Simple_repeat Simple_repeat 1 26 0 234 191 0 0 chr2 236992001 236992043 -16264540 - MLT2B1 LTR ERVL -2 513 472 285 29 0 0 chr2 236992079 236992113 -16264470 + (TG)n Simple_repeat Simple_repeat 2 35 0 276 30 0 0 chr2 236992286 236992319 -16264264 + (CA)n Simple_repeat Simple_repeat 2 34 0 1499 234 102 16 chr2 236992319 236992751 -16263832 - MLT2B1 LTR ERVL -51 469 1 186 385 10 0 chr2 236993129 236993225 -16263358 + L2 LINE L2 2404 2500 -814 2055 95 18 0 chr2 236994309 236994592 -16261991 + AluY SINE Alu 1 288 -23 583 135 0 10 chr2 236994694 236994790 -16261793 - AluSq/x SINE Alu -205 108 14 806 198 104 45 chr2 236994797 236995104 -16261479 - MLT1C LTR MaLR -142 363 1 878 289 18 7 chr2 236995201 236995478 -16261105 - MLT1E2 LTR MaLR 0 626 347 232 210 48 0 chr2 236995492 236995554 -16261029 + MLT1B LTR MaLR 59 123 -267 31 0 0 0 chr2 236995886 236995917 -16260666 + AT_rich Low_complexity Low_complexity 1 31 0 2956 76 13 0 chr2 237047512 237047909 -16208674 - L1PA8 LINE L1 -3 6169 5768 987 217 74 3 chr2 237048527 237048850 -16207733 - MER69 DNA AcHobo -37 2489 2144 508 133 0 0 chr2 237048880 237048955 -16207628 - AluSg/x SINE Alu -28 284 210 304 278 64 25 chr2 237049150 237049328 -16207255 + L1MC4a LINE L1 5640 5728 -393 2070 125 7 0 chr2 237049328 237049624 -16206959 + AluSx SINE Alu 1 298 -14 304 278 64 25 chr2 237049624 237049705 -16206878 + L1MC4a LINE L1 5728 5804 -317 23 33 0 0 chr2 237049726 237049756 -16206827 + AT_rich Low_complexity Low_complexity 1 30 0 2261 132 91 5 chr2 237050131 237050525 -16206058 - MSTA LTR MaLR 0 428 1 1334 181 69 35 chr2 237051354 237051642 -16204941 - MSTB LTR MaLR 0 426 129 2040 291 142 15 chr2 237051749 237052784 -16203799 + L2 LINE L2 2122 3313 0 938 259 13 18 chr2 237053368 237053592 -16202991 - MER58A DNA MER1_type -1 223 1 238 259 0 0 chr2 237054302 237054356 -16202227 - MIR SINE MIR -25 237 184 357 236 99 103 chr2 237054617 237054773 -16201810 - MER69 DNA AcHobo -224 2302 2146 1346 191 0 72 chr2 237054773 237054941 -16201642 - AluSx SINE Alu -15 297 161 513 0 0 0 chr2 237054941 237054998 -16201585 + (TA)n Simple_repeat Simple_repeat 1 57 0 1346 191 0 72 chr2 237054998 237055149 -16201434 - AluSx SINE Alu -151 161 1 357 236 99 103 chr2 237055149 237055255 -16201328 - MER69 DNA AcHobo -380 2146 2041 26 0 0 0 chr2 237055581 237055607 -16200976 + AT_rich Low_complexity Low_complexity 1 26 0 219 336 162 29 chr2 237056433 237057160 -16199423 + L2 LINE L2 1441 2264 -1050 301 263 70 53 chr2 237057242 237057356 -16199227 + L2 LINE L2 3198 3313 0 367 326 135 49 chr2 237057357 237057765 -16198818 + L2 LINE L2 2315 2757 -557 309 288 0 0 chr2 237057800 237057873 -16198710 + (TG)n Simple_repeat Simple_repeat 2 74 0 2358 163 36 11 chr2 237058204 237058375 -16198208 - L1MC1 LINE L1 -5 6328 6163 2551 93 3 40 chr2 237058375 237058752 -16197831 - THE1B LTR MaLR -1 363 1 2358 163 36 11 chr2 237058752 237059052 -16197531 - L1MC1 LINE L1 -170 6163 5845 261 317 0 12 chr2 237059820 237059902 -16196681 - MER5A DNA MER1_type -90 99 19 1690 116 131 24 chr2 237060772 237061109 -16195474 - THE1C LTR MaLR -2 373 1 222 273 66 66 chr2 237061800 237061921 -16194662 - L2 LINE L2 -11 3302 3182 2339 130 28 0 chr2 237061943 237062297 -16194286 - THE1B LTR MaLR 0 364 1 1577 195 3 22 chr2 237062999 237063317 -16193266 - AluJo SINE Alu 0 312 1 1662 187 110 66 chr2 237063369 237063782 -16192801 - MLT2B1 LTR ERVL 0 520 80 2527 111 6 0 chr2 237063782 237064135 -16192448 + THE1A LTR MaLR 1 355 0 1662 187 110 66 chr2 237064135 237064219 -16192364 - MLT2B1 LTR ERVL -440 80 1 420 68 17 0 chr2 237064219 237064278 -16192305 + U6 snRNA snRNA 1 60 -47 24 32 0 0 chr2 237064284 237064315 -16192268 + AT_rich Low_complexity Low_complexity 1 31 0 1776 233 34 89 chr2 237064738 237065469 -16191114 + LTR8 LTR ERV1 1 691 0 2055 139 3 0 chr2 237065508 237065803 -16190780 + AluSx SINE Alu 1 296 -16 2419 121 14 16 chr2 237066298 237066662 -16189921 - THE1B LTR MaLR 0 364 2 2100 131 3 23 chr2 237068396 237068701 -16187882 - AluSx SINE Alu -13 299 1 181 346 148 0 chr2 237068991 237069072 -16187511 + L3 LINE CR1 1351 1443 -134 2202 167 20 89 chr2 237069201 237069739 -16186844 - MLT1D LTR MaLR -2 503 3 496 312 75 15 chr2 237069779 237069978 -16186605 - MIR SINE MIR -32 230 20 189 186 0 23 chr2 237070429 237070472 -16186111 - L2 LINE L2 -10 3303 3262 852 218 10 0 chr2 237071061 237071254 -16185329 + MLT1B LTR MaLR 196 390 0 449 318 19 57 chr2 237072937 237073148 -16183435 - MIR SINE MIR -58 204 2 253 187 67 13 chr2 237073741 237073816 -16182767 + HsTC2 DNA Tc2 1 79 -1819 322 278 81 52 chr2 237074032 237074205 -16182378 - MIR3 SINE MIR -58 150 3 230 25 0 75 chr2 237074486 237074526 -16182057 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 541 283 100 78 chr2 237075130 237075668 -16180915 + L1M4 LINE L1 4772 5321 -825 517 200 0 66 chr2 237075705 237075871 -16180712 + L1MB8 LINE L1 6016 6178 0 628 345 112 24 chr2 237075932 237076599 -16179984 + L2 LINE L2 1992 2717 -597 1035 275 80 14 chr2 237076609 237077023 -16179560 + LTR16A LTR ERVL 8 448 -2 194 320 0 0 chr2 237077298 237077348 -16179235 + L2 LINE L2 3246 3295 -18 222 160 0 0 chr2 237077937 237077987 -16178596 + A-rich Low_complexity Low_complexity 1 50 0 944 134 8 0 chr2 237078037 237078171 -16178412 + AluJo SINE Alu 1 135 -177 1665 191 14 0 chr2 237078171 237078464 -16178119 + AluJo SINE Alu 1 297 -15 24 0 0 0 chr2 237078975 237078999 -16177584 + AT_rich Low_complexity Low_complexity 1 24 0 1925 44 0 0 chr2 237081080 237081306 -16175277 + AluY SINE Alu 86 311 0 405 238 24 16 chr2 237081613 237081739 -16174844 + MER3 DNA MER1_type 83 209 0 641 236 101 25 chr2 237082731 237082968 -16173615 - MER112 DNA MER1_type -1 255 1 249 33 0 0 chr2 237085402 237085432 -16171151 + (CA)n Simple_repeat Simple_repeat 1 30 0 342 0 0 0 chr2 237086380 237086418 -16170165 + (TG)n Simple_repeat Simple_repeat 1 38 0 182 36 0 36 chr2 237086462 237086490 -16170093 + (TAGA)n Simple_repeat Simple_repeat 4 30 0 4281 83 2 0 chr2 237086517 237087070 -16169513 + MER41A LTR ERV1 1 554 0 225 0 0 0 chr2 237087081 237087106 -16169477 + (TA)n Simple_repeat Simple_repeat 2 26 0 236 158 18 0 chr2 237087594 237087651 -16168932 + (ATG)n Simple_repeat Simple_repeat 1 58 0 759 272 23 58 chr2 237087680 237087941 -16168642 - MIR SINE MIR 0 262 11 252 77 0 0 chr2 237088476 237088515 -16168068 + (CA)n Simple_repeat Simple_repeat 1 39 0 304 305 93 0 chr2 237089492 237089610 -16166973 - MLT1K LTR MaLR -107 481 353 342 331 45 13 chr2 237089709 237089866 -16166717 - MLT1K LTR MaLR -369 219 58 23 0 6 0 chr2 237089994 237090045 -16166538 + AT_rich Low_complexity Low_complexity 1 23 0 2414 89 0 0 chr2 237090796 237091100 -16165483 - AluY SINE Alu -7 304 1 208 311 54 27 chr2 237091596 237091670 -16164913 + MER91C DNA MER1_type 33 108 -32 237 159 0 0 chr2 237092020 237092064 -16164519 + (TG)n Simple_repeat Simple_repeat 1 44 0 192 329 71 12 chr2 237092136 237092221 -16164362 + MIR SINE MIR 38 127 -81 25 31 0 0 chr2 237092230 237092262 -16164321 + AT_rich Low_complexity Low_complexity 1 32 0 318 222 44 11 chr2 237094626 237094716 -16161867 + MIR SINE MIR 2 94 -168 666 240 49 21 chr2 237095635 237095960 -16160623 + L1M4 LINE L1 3005 3338 -2808 467 145 0 0 chr2 237095961 237096030 -16160553 + AluS SINE Alu 1 69 -244 1758 104 0 29 chr2 237096316 237096594 -16159989 + L1PB1 LINE L1 5879 6148 -3 24 0 0 0 chr2 237096594 237096618 -16159965 + AT_rich Low_complexity Low_complexity 1 24 0 418 351 71 0 chr2 237096758 237096926 -16159657 - MER91A DNA MER1_type 0 196 17 2136 105 7 3 chr2 237098916 237099212 -16157371 - AluSx SINE Alu -11 301 5 2108 121 0 3 chr2 237100434 237100732 -16155851 - AluSq SINE Alu -16 297 1 885 168 73 5 chr2 237100975 237101166 -16155417 + MLT1C LTR MaLR 1 204 -263 10129 163 39 30 chr2 237101168 237102522 -16154061 + L1MA5 LINE L1 2855 4195 -2105 4260 105 6 5 chr2 237102522 237103152 -16153431 - L1PA14 LINE L1 -4 6157 5527 10129 163 39 30 chr2 237103152 237104403 -16152180 + L1PA14 LINE L1 4195 5509 -791 2493 53 7 0 chr2 237104403 237104707 -16151876 - AluY SINE Alu -5 306 1 10129 163 39 30 chr2 237104707 237105506 -16151077 + L1MA5 LINE L1 5509 6299 -1 674 256 120 49 chr2 237105493 237105517 -16151066 + L1MEc LINE L1 2148 2169 -4046 * 1803 166 0 43 chr2 237105517 237105843 -16150740 + AluSx SINE Alu 1 312 0 674 256 120 49 chr2 237105843 237106622 -16149961 + L1MEc LINE L1 2169 2993 -3222 308 241 0 85 chr2 237106614 237106755 -16149828 + L1MEc LINE L1 3841 3969 -2246 * 1255 243 53 118 chr2 237106768 237107076 -16149507 + L1MEc LINE L1 4216 4542 -1673 437 172 11 21 chr2 237107076 237107169 -16149414 + FLAM_A SINE Alu 35 126 -16 1255 243 53 118 chr2 237107169 237107979 -16148604 + L1MEc LINE L1 4542 5333 -882 1228 156 33 19 chr2 237107980 237108191 -16148392 + AluJb SINE Alu 93 306 -6 475 283 100 17 chr2 237108510 237108690 -16147893 - MIR SINE MIR -10 252 58 223 222 28 0 chr2 237110616 237110688 -16145895 + (TA)n Simple_repeat Simple_repeat 2 75 0 351 210 198 32 chr2 237110959 237111116 -16145467 - MLT1J LTR MaLR -10 501 319 542 288 15 34 chr2 237111170 237111375 -16145208 - MLT1J LTR MaLR -309 202 2 1994 109 3 25 chr2 237111653 237111937 -16144646 + AluSc SINE Alu 1 278 -31 246 32 0 0 chr2 237111942 237111973 -16144610 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1075 294 57 5 chr2 237112140 237112525 -16144058 - LTR16A LTR ERVL 0 450 46 1046 278 137 20 chr2 237112528 237112931 -16143652 - LTR16A LTR ERVL 0 450 1 381 75 0 0 chr2 237113634 237113687 -16142896 + (TTCC)n Simple_repeat Simple_repeat 4 56 0 2139 95 7 0 chr2 237113709 237113983 -16142600 - AluSc SINE Alu -33 276 1 2176 126 19 24 chr2 237114360 237114734 -16141849 - THE1C LTR MaLR -3 372 1 202 200 0 55 chr2 237114996 237115051 -16141532 + L2 LINE L2 1355 1406 -1908 314 278 21 21 chr2 237115667 237115764 -16140819 - L1MC4 LINE L1 -1331 6711 6615 * 322 319 0 0 chr2 237115683 237115777 -16140806 + L1MC4 LINE L1 6614 6707 -1335 474 301 53 34 chr2 237116395 237116601 -16139982 - L2 LINE L2 0 3313 3104 342 309 47 20 chr2 237117663 237117812 -16138771 + L1M4 LINE L1 4044 4196 -1950 1626 210 15 0 chr2 237118961 237119290 -16137293 + L1MC1 LINE L1 5994 6327 -6 23 0 0 0 chr2 237119357 237119380 -16137203 + AT_rich Low_complexity Low_complexity 1 23 0 407 281 66 106 chr2 237120257 237120513 -16136070 + MIR SINE MIR 17 262 0 2207 99 0 0 chr2 237121424 237121706 -16134877 - AluSq SINE Alu -16 297 16 611 274 19 66 chr2 237122180 237122392 -16134191 - MIR SINE MIR -33 229 28 415 286 100 36 chr2 237122855 237123215 -16133368 - HAL1b LINE L1 -864 484 102 2611 139 42 5 chr2 237123574 237124006 -16132577 + MER83 LTR ERV1 1 448 0 423 119 0 0 chr2 237124035 237124102 -16132481 + (TA)n Simple_repeat Simple_repeat 1 67 0 605 181 110 99 chr2 237126717 237126899 -16129684 - MER20 DNA MER1_type -33 186 3 846 157 0 27 chr2 237128903 237129050 -16127533 + FRAM SINE Alu 29 171 -5 1676 137 4 8 chr2 237129053 237129301 -16127282 + AluSg/x SINE Alu 66 312 0 1602 125 28 31 chr2 237129447 237129734 -16126849 - L1PA16 LINE L1 0 6166 5881 1179 166 125 74 chr2 237130166 237130533 -16126050 - MLT1B LTR MaLR 0 390 5 219 139 0 0 chr2 237131504 237131540 -16125043 + (CA)n Simple_repeat Simple_repeat 1 36 0 24 32 0 0 chr2 237132426 237132457 -16124126 + AT_rich Low_complexity Low_complexity 1 31 0 725 151 84 42 chr2 237132512 237132678 -16123905 - MLT1B LTR MaLR -217 173 1 1161 112 29 5 chr2 237132718 237132924 -16123659 + L1MA7 LINE L1 6081 6291 0 253 311 14 0 chr2 237133085 237133159 -16123424 + L3 LINE CR1 897 971 -606 708 89 0 0 chr2 237134811 237134912 -16121671 + (TAGA)n Simple_repeat Simple_repeat 4 104 0 1561 128 27 0 chr2 237134999 237135257 -16121326 + L1MA9 LINE L1 5525 5789 -523 279 136 0 37 chr2 237135259 237135340 -16121243 + (TA)n Simple_repeat Simple_repeat 2 79 0 2296 111 95 55 chr2 237135344 237135850 -16120733 + L1MA9 LINE L1 5787 6312 0 1430 223 103 7 chr2 237136347 237136765 -16119818 - MLT1C LTR MaLR -9 458 1 2178 117 0 0 chr2 237137254 237137553 -16119030 - AluSc SINE Alu -10 299 1 309 68 0 0 chr2 237137624 237137668 -16118915 - MADE1 DNA Mariner -2 78 35 508 69 14 0 chr2 237137684 237137756 -16118827 + Alu SINE Alu 224 296 -16 1916 160 39 18 chr2 237139351 237139732 -16116851 + Tigger2 DNA MER2_type 2330 2718 0 198 309 143 12 chr2 237140233 237140317 -16116266 - MIR SINE MIR -90 118 24 481 289 131 55 chr2 237141108 237141506 -16115077 + MLT1K LTR MaLR 126 553 -35 640 312 35 9 chr2 237141658 237141889 -16114694 + LTR16B LTR ERVL 3 239 -225 21 0 0 0 chr2 237143093 237143114 -16113469 + AT_rich Low_complexity Low_complexity 1 21 0 360 0 0 0 chr2 237143874 237143914 -16112669 + (TA)n Simple_repeat Simple_repeat 2 41 0 2925 120 2 18 chr2 237144656 237145090 -16111493 + MSTA LTR MaLR 1 427 -1 192 179 0 0 chr2 237145138 237145177 -16111406 + (CA)n Simple_repeat Simple_repeat 2 40 0 379 349 71 28 chr2 237145909 237146121 -16110462 - MIR SINE MIR -38 224 4 1819 171 3 13 chr2 237146753 237147058 -16109525 - AluJo SINE Alu -6 306 5 466 202 223 45 chr2 237148025 237148231 -16108352 + L1ME4a LINE L1 5725 5893 -228 252 86 0 0 chr2 237148231 237148266 -16108317 + (TG)n Simple_repeat Simple_repeat 2 36 0 466 202 223 45 chr2 237148266 237148395 -16108188 + L1ME4a LINE L1 5893 6120 -1 228 295 98 60 chr2 237148438 237148621 -16107962 + L2 LINE L2 2596 2785 -529 391 272 109 41 chr2 237148834 237148947 -16107636 + MIR SINE MIR 100 227 -35 2233 118 33 33 chr2 237148947 237149311 -16107272 + THE1B LTR MaLR 1 364 0 391 272 109 41 chr2 237149311 237149344 -16107239 + MIR SINE MIR 227 256 -6 431 261 89 92 chr2 237149624 237149995 -16106588 + L1MC5 LINE L1 7557 7926 -35 3713 34 0 0 chr2 237150105 237150574 -16106009 - L1PA2 LINE L1 -1075 5071 4603 7977 9 0 0 chr2 237150574 237151641 -16104942 + L1PA2 LINE L1 5088 6154 -1 317 207 37 37 chr2 237153201 237153283 -16103300 + MER5B DNA MER1_type 97 178 0 2648 30 0 3 chr2 237154073 237154377 -16102206 + AluY SINE Alu 1 303 -8 317 209 139 0 chr2 237154544 237154630 -16101953 - MIR SINE MIR -78 184 87 712 299 61 4 chr2 237154858 237155089 -16101494 + MIR SINE MIR 13 256 -6 500 245 21 10 chr2 237155653 237155845 -16100738 + L1MC/D LINE L1 4948 5141 -1005 839 136 68 6 chr2 237155870 237156098 -16100485 + L1MC/D LINE L1 5200 5445 -743 282 312 28 0 chr2 237156152 237156261 -16100322 + MER94 DNA DNA 4 115 -19 1096 180 0 53 chr2 237156262 237156332 -16100251 + L1MC/D LINE L1 5458 5530 -829 4107 130 5 2 chr2 237156332 237156964 -16099619 - MER41B LTR ERV1 -1 634 1 1096 180 0 53 chr2 237156964 237157137 -16099446 + L1MC/D LINE L1 5530 5688 -671 182 222 0 44 chr2 237158296 237158341 -16098242 + MIR SINE MIR 104 146 -116 184 29 114 0 chr2 237158561 237158596 -16097987 + T-rich Low_complexity Low_complexity 2 40 0 724 306 58 9 chr2 237158599 237158942 -16097641 + LTR16C LTR ERVL 132 491 0 190 259 157 54 chr2 237159700 237159847 -16096736 + L2 LINE L2 2328 2489 -825 379 270 56 16 chr2 237159982 237160108 -16096475 - MIR SINE MIR -57 205 75 709 299 52 13 chr2 237160292 237160523 -16096060 + MIR SINE MIR 22 261 -1 191 263 18 0 chr2 237161709 237161766 -16094817 - MIR SINE MIR -46 216 159 23139 178 15 24 chr2 237162396 237168976 -16087607 - L1PA11 LINE L1 -4 7608 8 23 0 0 0 chr2 237169135 237169158 -16087425 + AT_rich Low_complexity Low_complexity 1 23 0 295 281 63 76 chr2 237169534 237169772 -16086811 + MLT1K LTR MaLR 24 258 -330 266 287 20 10 chr2 237170638 237170739 -16085844 + L1ME3 LINE L1 6004 6105 -57 4034 44 2 2 chr2 237170875 237171374 -16085209 - L1PA5 LINE L1 -8 6146 5648 318 26 0 0 chr2 237171502 237171541 -16085042 + (CA)n Simple_repeat Simple_repeat 2 40 0 650 272 181 21 chr2 237172190 237172734 -16083849 + L2 LINE L2 2671 3310 -3 2225 106 3 13 chr2 237172818 237173119 -16083464 + AluSx SINE Alu 1 298 -14 261 232 14 0 chr2 237174782 237174851 -16081732 + CT-rich Low_complexity Low_complexity 1 70 0 29 28 0 0 chr2 237175423 237175459 -16081124 + AT_rich Low_complexity Low_complexity 1 36 0 198 103 0 0 chr2 237175527 237175556 -16081027 + (A)n Simple_repeat Simple_repeat 1 29 0 573 261 18 24 chr2 237176018 237176183 -16080400 - MIR SINE MIR -11 251 88 458 273 0 15 chr2 237176215 237176347 -16080236 - MIR SINE MIR -1 261 132 349 301 121 29 chr2 237176512 237176685 -16079898 - MIR SINE MIR -25 237 49 1713 234 78 48 chr2 237177031 237177596 -16078987 + MLT1E LTR MaLR 1 582 -11 195 274 209 72 chr2 237177799 237177952 -16078631 + MIR3 SINE MIR 9 182 -26 278 65 0 22 chr2 237178930 237178976 -16077607 + (CA)n Simple_repeat Simple_repeat 2 46 0 242 271 104 21 chr2 237179836 237179932 -16076651 - MIR SINE MIR -65 143 40 708 246 150 9 chr2 237180809 237181313 -16075270 - LTR50 LTR ERVL -114 681 18 862 303 58 16 chr2 237181703 237182138 -16074445 - ERVL LTR ERVL -401 5363 4911 2166 186 25 16 chr2 237182525 237182967 -16073616 + L1MC1 LINE L1 5883 6328 -5 200 296 28 28 chr2 237183866 237183937 -16072646 + L2 LINE L2 3193 3263 -9 270 287 43 11 chr2 237184217 237184311 -16072272 + MIR3 SINE MIR 58 154 -54 242 357 54 42 chr2 237184459 237184627 -16071956 + L2 LINE L2 3099 3268 -4 285 51 0 0 chr2 237184742 237184781 -16071802 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 207 314 23 23 chr2 237185486 237185572 -16071011 + L2 LINE L2 2974 3059 -213 619 280 131 44 chr2 237185659 237186124 -16070459 - MLT1H LTR MaLR 0 549 2 488 268 86 41 chr2 237186823 237187137 -16069446 + L1ME4a LINE L1 5574 5901 -220 2050 131 7 13 chr2 237188751 237189056 -16067527 - AluSx SINE Alu -1 311 9 288 0 0 0 chr2 237190062 237190094 -16066489 + (CA)n Simple_repeat Simple_repeat 1 32 0 2473 169 89 21 chr2 237190601 237190863 -16065720 + L1MA9 LINE L1 5476 5719 -593 249 33 0 0 chr2 237190863 237190893 -16065690 + (TGAA)n Simple_repeat Simple_repeat 4 33 0 2473 169 89 21 chr2 237190893 237191302 -16065281 + L1MA9 LINE L1 5719 6290 -22 22 0 0 0 chr2 237191302 237191324 -16065259 + AT_rich Low_complexity Low_complexity 1 22 0 367 306 118 32 chr2 237191458 237191644 -16064939 - L2 LINE L2 -84 3229 3028 255 274 0 0 chr2 237192441 237192503 -16064080 + L2 LINE L2 3183 3244 -28 1795 228 110 42 chr2 237192504 237193079 -16063504 - MLT1E2 LTR MaLR 0 626 13 2926 72 10 0 chr2 237193118 237193506 -16063077 - L1PA8 LINE L1 -4 6168 5777 202 324 103 21 chr2 237193625 237193770 -16062813 - MIR SINE MIR -10 252 96 895 247 5 36 chr2 237193860 237194079 -16062504 + MIR SINE MIR 18 229 -33 218 232 18 18 chr2 237194667 237194723 -16061860 + CT-rich Low_complexity Low_complexity 2 57 0 369 62 0 0 chr2 237195880 237195928 -16060655 + (CAA)n Simple_repeat Simple_repeat 1 48 0 773 174 0 0 chr2 237196647 237196768 -16059815 + FLAM_A SINE Alu 1 121 -12 874 292 123 41 chr2 237197773 237198429 -16058154 + L2 LINE L2 2334 3047 -266 2348 102 0 0 chr2 237198437 237198742 -16057841 + AluSp SINE Alu 2 306 -7 197 297 162 18 chr2 237199412 237199523 -16057060 - MIR SINE MIR -19 243 117 771 148 0 0 chr2 237200443 237200578 -16056005 + (TG)n Simple_repeat Simple_repeat 2 136 0 2176 147 23 61 chr2 237200989 237201068 -16055515 - MSTB LTR MaLR 0 426 346 1834 150 7 0 chr2 237201068 237201341 -16055242 + AluSx SINE Alu 25 299 -13 2176 147 23 61 chr2 237201341 237201675 -16054908 - MSTB LTR MaLR -80 346 29 2029 134 47 33 chr2 237201675 237202034 -16054549 - THE1B LTR MaLR 0 364 1 2176 147 23 61 chr2 237202034 237202062 -16054521 - MSTB LTR MaLR -397 29 1 1199 170 0 32 chr2 237202371 237202589 -16053994 + AluJb SINE Alu 102 312 0 2622 115 0 3 chr2 237203251 237203616 -16052967 + THE1B LTR MaLR 1 364 0 234 277 11 85 chr2 237203961 237204138 -16052445 - MER112 DNA MER1_type 0 260 97 231 61 0 0 chr2 237204139 237204172 -16052411 + (TG)n Simple_repeat Simple_repeat 2 34 0 1613 74 0 0 chr2 237204202 237204417 -16052166 - L1MA1 LINE L1 -6 6296 6082 842 233 44 0 chr2 237205084 237205264 -16051319 + MER5A DNA MER1_type 2 189 0 1100 191 179 32 chr2 237205704 237206075 -16050508 - MSTC LTR MaLR 0 428 1 2562 52 10 0 chr2 237206247 237206552 -16050031 - AluY SINE Alu -3 308 1 1730 134 62 56 chr2 237206782 237207155 -16049428 + THE1C LTR MaLR 1 375 0 465 262 134 76 chr2 237207206 237207706 -16048877 + MLT1K LTR MaLR 44 572 -16 23 33 0 0 chr2 237208463 237208493 -16048090 + AT_rich Low_complexity Low_complexity 1 30 0 295 298 42 52 chr2 237209600 237209791 -16046792 + HAL1b LINE L1 746 934 -414 2403 102 0 0 chr2 237209792 237210097 -16046486 + AluSg SINE Alu 1 305 -5 637 247 137 19 chr2 237210329 237210600 -16045983 + L2 LINE L2 1923 2225 -1089 1023 178 89 11 chr2 237210702 237210893 -16045690 + MER3 DNA MER1_type 3 208 -1 2310 154 80 17 chr2 237212462 237212864 -16043719 + MSTA LTR MaLR 2 428 0 807 154 0 0 chr2 237213906 237214023 -16042560 + FLAM_C SINE Alu 2 118 -25 349 313 66 55 chr2 237214088 237214270 -16042313 + MIR SINE MIR 34 217 -45 447 152 0 13 chr2 237214749 237214828 -16041755 + AluJ/FRAM SINE Alu 232 309 -3 468 324 0 0 chr2 237215747 237215926 -16040657 + (CA)n Simple_repeat Simple_repeat 2 180 0 240 288 0 0 chr2 237215963 237216109 -16040474 + (CA)n Simple_repeat Simple_repeat 1 146 0 440 226 0 4 chr2 237216745 237216835 -16039748 - MER5A DNA MER1_type -77 112 15 2077 138 3 0 chr2 237217157 237217448 -16039135 - AluSx SINE Alu -20 292 1 24 32 0 0 chr2 237218093 237218124 -16038459 + AT_rich Low_complexity Low_complexity 1 31 0 2106 114 31 0 chr2 237218514 237218804 -16037779 + AluSx SINE Alu 1 299 -13 421 297 9 0 chr2 237218929 237219040 -16037543 - MER94 DNA DNA -22 112 1 217 248 57 38 chr2 237219582 237219687 -16036896 - MIR SINE MIR -6 256 150 448 266 136 65 chr2 237220756 237221139 -16035444 + L2 LINE L2 2088 2497 -817 2023 155 0 3 chr2 237221506 237221838 -16034745 - AluJb SINE Alu 0 312 1 314 213 40 0 chr2 237222559 237222634 -16033949 - MER103 DNA DNA -87 79 2 1749 99 14 71 chr2 237223106 237223388 -16033195 - AluY SINE Alu -45 266 1 5178 130 8 4 chr2 237223394 237224148 -16032435 - L1PA16 LINE L1 0 6166 5410 6082 146 40 78 chr2 237224148 237225645 -16030938 + pTR5 LTR ERV1 743 2438 0 909 207 36 0 chr2 237225659 237225881 -16030702 - L1PA16 LINE L1 -744 5402 5173 201 237 0 0 chr2 237227320 237227379 -16029204 + CT-rich Low_complexity Low_complexity 1 59 0 663 231 41 56 chr2 237227645 237227840 -16028743 + MIR SINE MIR 1 192 -70 213 121 0 0 chr2 237227896 237227929 -16028654 + (CTA)n Simple_repeat Simple_repeat 3 35 0 1780 256 96 26 chr2 237229358 237229859 -16026724 - MLT1H LTR MaLR -2 547 12 1268 248 157 26 chr2 237230297 237230716 -16025867 + MLT2B1 LTR ERVL 1 487 -33 243 0 0 0 chr2 237230716 237230743 -16025840 + (CA)n Simple_repeat Simple_repeat 2 28 0 1268 248 157 26 chr2 237230743 237230783 -16025800 + MLT2B1 LTR ERVL 487 520 0 511 299 21 7 chr2 237231342 237231486 -16025097 + MLT2F LTR ERVL 1 146 -517 548 165 10 0 chr2 237231497 237231594 -16024989 + MLT1E3 LTR MaLR 58 155 -469 510 254 117 82 chr2 237231504 237231846 -16024737 + MLT2C1 LTR ERVL 44 397 0 * 495 249 32 88 chr2 237231921 237232138 -16024445 + MIR SINE MIR 8 212 -50 264 327 64 19 chr2 237232218 237232374 -16024209 - MIR SINE MIR -16 246 84 210 263 246 47 chr2 237233148 237233319 -16023264 - MIR SINE MIR -10 252 48 226 279 88 54 chr2 237233576 237233723 -16022860 + L2 LINE L2 3159 3310 -3 266 291 0 47 chr2 237233805 237233891 -16022692 - MIR SINE MIR -94 168 87 538 88 0 239 chr2 237234352 237234511 -16022072 + L1MA4 LINE L1 6158 6278 -22 232 135 77 0 chr2 237236044 237236096 -16020487 - MLT2C2 LTR ERVL -2 462 407 223 167 0 24 chr2 237236102 237236144 -16020439 + (TG)n Simple_repeat Simple_repeat 2 42 0 254 65 0 0 chr2 237236145 237236176 -16020407 - MLT2D LTR ERVL -17 397 367 282 116 0 0 chr2 237236206 237236249 -16020334 + (TA)n Simple_repeat Simple_repeat 1 43 0 186 118 0 0 chr2 237236291 237236325 -16020258 + (TG)n Simple_repeat Simple_repeat 2 35 0 1678 206 33 38 chr2 237236345 237236390 -16020193 - MLT2D LTR ERVL -17 397 353 288 0 0 0 chr2 237236390 237236422 -16020161 + (TG)n Simple_repeat Simple_repeat 2 33 0 1678 206 33 38 chr2 237236422 237236774 -16019809 - MLT2D LTR ERVL -61 353 2 684 217 45 19 chr2 237236867 237237024 -16019559 + MER20 DNA MER1_type 59 219 0 354 299 237 23 chr2 237237031 237237423 -16019160 + L2 LINE L2 2833 3308 -5 2475 58 3 0 chr2 237237454 237237749 -16018834 - AluSc SINE Alu -13 296 1 342 0 0 0 chr2 237237795 237237833 -16018750 + (CA)n Simple_repeat Simple_repeat 2 39 0 315 344 31 38 chr2 237239091 237239233 -16017350 - MIR3 SINE MIR -17 191 49 1569 169 156 24 chr2 237239233 237239611 -16016972 - MSTC LTR MaLR 0 428 1 315 344 31 38 chr2 237239611 237239628 -16016955 - MIR3 SINE MIR -159 49 33 607 257 75 42 chr2 237239861 237240218 -16016365 - MLT1J2 LTR MaLR 0 409 37 279 0 0 0 chr2 237240324 237240355 -16016228 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 251 260 52 0 chr2 237241179 237241256 -16015327 + MER103 DNA DNA 77 157 -9 333 240 0 54 chr2 237241632 237241761 -16014822 + CT-rich Low_complexity Low_complexity 2 123 0 335 268 21 41 chr2 237242467 237242564 -16014019 - MIR SINE MIR -146 116 22 224 280 80 0 chr2 237242612 237242687 -16013896 + MIR SINE MIR 180 260 -2 222 220 0 0 chr2 237242689 237242748 -16013835 + (TTA)n Simple_repeat Simple_repeat 3 61 0 1656 173 33 10 chr2 237243290 237243590 -16012993 + AluJo SINE Alu 1 307 -5 405 280 168 42 chr2 237244557 237244995 -16011588 - L2 LINE L2 -61 3252 2763 231 275 14 101 chr2 237244997 237245135 -16011448 - MLT1H LTR MaLR 0 549 424 520 233 45 74 chr2 237245340 237245542 -16011041 - MLT1H LTR MaLR -343 206 11 1814 259 76 28 chr2 237245542 237246049 -16010534 - L2 LINE L2 -559 2755 2215 1916 210 160 66 chr2 237246049 237246643 -16009940 - MLT1E1 LTR MaLR 0 654 5 1814 259 76 28 chr2 237246643 237246711 -16009872 - L2 LINE L2 -1099 2215 2152 757 277 23 18 chr2 237247259 237247479 -16009104 + MIR SINE MIR 2 222 -40 1843 164 0 14 chr2 237248639 237248931 -16007652 + AluJo SINE Alu 1 288 -24 223 275 29 0 chr2 237249381 237249450 -16007133 + CT-rich Low_complexity Low_complexity 2 72 0 335 293 56 72 chr2 237249890 237250142 -16006441 + MIR SINE MIR 3 251 -11 333 255 98 29 chr2 237250919 237251021 -16005562 - MLT1L LTR MaLR -421 194 86 1810 90 20 4 chr2 237251306 237251550 -16005033 + L1PA13 LINE L1 5914 6161 -2 1096 69 0 0 chr2 237251588 237251719 -16004864 + AluY SINE Alu 1 131 -180 2347 82 0 0 chr2 237252265 237252557 -16004026 + AluY SINE Alu 1 292 -19 721 264 159 50 chr2 237252750 237253166 -16003417 - MLT1K LTR MaLR 0 588 128 1591 138 0 50 chr2 237254302 237254562 -16002021 + AluSx SINE Alu 56 302 -10 2131 131 0 6 chr2 237255292 237255605 -16000978 + AluSx SINE Alu 2 312 0 300 200 86 14 chr2 237255661 237255731 -16000852 + L2 LINE L2 3162 3236 -36 21 26 0 26 chr2 237256482 237256501 -16000082 + AT_rich Low_complexity Low_complexity 1 19 -19 2005 83 0 0 chr2 237256501 237256753 -15999830 - AluY SINE Alu -59 252 1 21 26 0 26 chr2 237256753 237256772 -15999811 + AT_rich Low_complexity Low_complexity 19 38 0 335 236 0 0 chr2 237257039 237257111 -15999472 + MER116 DNA Mariner 2 73 -7 483 277 113 0 chr2 237257398 237257575 -15999008 - MIR SINE MIR -42 220 24 2787 160 85 6 chr2 237257578 237258060 -15998523 - MLT2B1 LTR ERVL 0 520 1 1438 236 38 45 chr2 237258544 237258780 -15997803 + Charlie4a DNA MER1_type 85 318 -1643 1923 181 3 0 chr2 237258780 237259089 -15997494 + AluJo SINE Alu 1 310 -2 1438 236 38 45 chr2 237259089 237259279 -15997304 + Charlie4a DNA MER1_type 318 508 0 216 0 0 0 chr2 237260655 237260679 -15995904 + (CA)n Simple_repeat Simple_repeat 2 25 0 2557 169 64 43 chr2 237261726 237262064 -15994519 - MER67A LTR ERV1 0 543 187 2120 112 0 0 chr2 237262064 237262368 -15994215 + AluSq SINE Alu 6 309 0 2557 169 64 43 chr2 237262368 237262559 -15994024 - MER67A LTR ERV1 -356 187 1 2239 158 69 12 chr2 237262646 237263051 -15993532 + MSTA LTR MaLR 1 428 0 327 266 0 0 chr2 237263118 237263197 -15993386 + MER116 DNA Mariner 2 80 0 1126 191 13 34 chr2 237264246 237264481 -15992102 - MLT1A2 LTR MaLR -4 370 141 2233 179 0 0 chr2 237264481 237264889 -15991694 - L1PB1 LINE L1 -1126 5020 4613 5851 124 26 27 chr2 237264893 237266026 -15990557 + L1PB1 LINE L1 5031 6150 -1 2252 107 3 3 chr2 237266047 237266355 -15990228 + AluSp SINE Alu 1 308 -5 700 231 19 13 chr2 237266386 237266542 -15990041 - MLT1A2 LTR MaLR -217 157 1 258 56 0 0 chr2 237266554 237266590 -15989993 + (A)n Simple_repeat Simple_repeat 1 36 0 202 250 0 0 chr2 237267520 237267564 -15989019 + L2 LINE L2 3222 3265 -7 441 315 26 52 chr2 237268065 237268332 -15988251 + MIR SINE MIR 3 262 0 231 259 0 35 chr2 237268382 237268467 -15988116 + CT-rich Low_complexity Low_complexity 4 85 0 759 229 126 0 chr2 237269478 237269653 -15986930 - MER3 DNA MER1_type 0 209 13 21 0 0 0 chr2 237270340 237270361 -15986222 + AT_rich Low_complexity Low_complexity 1 21 0 2155 119 0 0 chr2 237271682 237271993 -15984590 - AluSq SINE Alu 0 311 1 405 0 0 0 chr2 237272049 237272094 -15984489 + (CA)n Simple_repeat Simple_repeat 1 45 0 471 309 93 10 chr2 237272651 237272845 -15983738 + MARNA DNA Mariner 256 465 -121 1450 249 16 19 chr2 237273137 237273503 -15983080 + MLT1A1 LTR MaLR 1 365 0 286 303 32 65 chr2 237273576 237273731 -15982852 + L2 LINE L2 3154 3303 -10 725 301 12 48 chr2 237273885 237274221 -15982362 - L2 LINE L2 -5 3308 2985 187 370 62 37 chr2 237274387 237274549 -15982034 + L2 LINE L2 3107 3272 0 207 0 0 0 chr2 237274622 237274645 -15981938 + (TA)n Simple_repeat Simple_repeat 2 24 0 2452 83 0 0 chr2 237274645 237274947 -15981636 - AluSc SINE Alu -7 302 1 207 0 0 0 chr2 237276234 237276257 -15980326 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 2016 136 0 3 chr2 237276278 237276564 -15980019 + AluSx SINE Alu 7 291 -21 237 241 0 0 chr2 237277065 237277119 -15979464 - AluJ/monomer SINE Alu 0 302 249 2269 126 0 0 chr2 237277137 237277447 -15979136 - AluSx SINE Alu -2 310 1 286 330 119 0 chr2 237277708 237277826 -15978757 + L2 LINE L2 3182 3313 0 247 291 81 54 chr2 237278030 237278178 -15978405 + L1ME4a LINE L1 5565 5716 -405 261 312 43 0 chr2 237278259 237278352 -15978231 - L2 LINE L2 -20 3293 3197 287 246 85 44 chr2 237278360 237278618 -15977965 + L1ME4a LINE L1 5815 6118 -3 1064 266 95 23 chr2 237280235 237280872 -15975711 - L1ME4a LINE L1 -21 6100 5417 2030 126 11 3 chr2 237281133 237281418 -15975165 + AluSx SINE Alu 1 287 -25 22 0 0 0 chr2 237281418 237281440 -15975143 + AT_rich Low_complexity Low_complexity 1 22 0 244 231 119 69 chr2 237281440 237281600 -15974983 + HAL1 LINE L1 144 311 -2196 1568 204 85 47 chr2 237281829 237282006 -15974577 + MLT1C LTR MaLR 6 175 -292 2167 125 3 0 chr2 237282006 237282302 -15974281 + AluSx SINE Alu 5 301 -11 1568 204 85 47 chr2 237282302 237282569 -15974014 + MLT1C LTR MaLR 175 467 0 25 51 0 0 chr2 237283069 237283108 -15973475 + AT_rich Low_complexity Low_complexity 1 39 0 668 297 86 0 chr2 237283337 237283546 -15973037 - MIR SINE MIR -18 244 18 2264 110 51 75 chr2 237283550 237283923 -15972660 - THE1B LTR MaLR 0 364 1 1902 229 62 15 chr2 237284563 237285044 -15971539 + MLT1D LTR MaLR 2 505 0 2327 177 55 7 chr2 237285290 237285726 -15970857 + LTR32 LTR ERVL 15 471 0 215 304 36 0 chr2 237286160 237286216 -15970367 + MIR3 SINE MIR 103 160 -48 1563 149 140 37 chr2 237286549 237286870 -15969713 + THE1A LTR MaLR 1 354 -1 240 346 38 0 chr2 237287069 237287188 -15969395 + MIR SINE MIR 56 185 -23 3843 189 95 2 chr2 237287810 237288905 -15967678 - L1MB7 LINE L1 -19 6165 4966 23 0 0 0 chr2 237288966 237288989 -15967594 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 237289051 237289074 -15967509 + AT_rich Low_complexity Low_complexity 1 23 0 750 286 40 9 chr2 237289622 237289846 -15966737 + MIR SINE MIR 32 262 0 1085 292 114 9 chr2 237290660 237291109 -15965474 - L1MC4a LINE L1 -1869 5939 5444 593 292 55 33 chr2 237291255 237291621 -15964962 - L1MC4a LINE L1 -1456 4690 4317 746 72 54 6 chr2 237291747 237291914 -15964669 + (TG)n Simple_repeat Simple_repeat 1 175 0 503 80 86 0 chr2 237291950 237292101 -15964482 + (TG)n Simple_repeat Simple_repeat 1 164 0 203 98 98 16 chr2 237292111 237292172 -15964411 + (GTGTG)n Simple_repeat Simple_repeat 1 66 0 2329 58 14 7 chr2 237292575 237292869 -15963714 - AluSc SINE Alu -13 296 1 342 0 0 0 chr2 237292915 237292953 -15963630 + (CA)n Simple_repeat Simple_repeat 2 39 0 615 244 10 66 chr2 237293240 237293437 -15963146 + MLT1H LTR MaLR 362 547 -2 262 137 81 6 chr2 237293793 237293954 -15962629 + (TG)n Simple_repeat Simple_repeat 1 173 0 440 118 68 12 chr2 237294009 237294170 -15962413 + (TG)n Simple_repeat Simple_repeat 2 171 0 684 272 75 29 chr2 237294175 237294537 -15962046 - L1MC4a LINE L1 -2168 3978 3606 400 317 71 42 chr2 237295273 237295513 -15961070 - L1M4 LINE L1 -549 5635 5389 420 318 35 20 chr2 237295523 237295925 -15960658 - L1M4 LINE L1 -800 5346 4939 1838 229 10 26 chr2 237295970 237296385 -15960198 + MLT2D LTR ERVL 7 414 0 475 279 106 44 chr2 237296440 237296661 -15959922 - L1M4 LINE L1 -1321 4825 4619 2124 132 0 0 chr2 237296661 237296978 -15959605 + AluSx SINE Alu 1 317 0 475 279 106 44 chr2 237296978 237297408 -15959175 - L1M4 LINE L1 -1527 4619 4126 1982 158 52 17 chr2 237297458 237297820 -15958763 - THE1C LTR MaLR 0 375 1 346 308 0 0 chr2 237297847 237297967 -15958616 - L1M4 LINE L1 -2222 3924 3805 739 90 0 0 chr2 237297990 237298079 -15958504 - AluSq/x SINE Alu -165 147 59 353 99 77 220 chr2 237298083 237298174 -15958409 + Alu SINE Alu 232 282 -20 2259 125 0 0 chr2 237299155 237299468 -15957115 + AluSq SINE Alu 1 313 0 627 222 117 13 chr2 237299667 237299910 -15956673 - MLT1H LTR MaLR 0 549 262 4728 38 2 0 chr2 237300122 237300653 -15955930 - L1PA3 LINE L1 -15 6140 5609 201 146 0 0 chr2 237301002 237301050 -15955533 + (A)n Simple_repeat Simple_repeat 1 48 0 23 0 0 0 chr2 237302322 237302345 -15954238 + AT_rich Low_complexity Low_complexity 1 23 0 750 286 40 9 chr2 237302893 237303117 -15953466 + MIR SINE MIR 32 262 0 204 293 37 24 chr2 237303820 237303902 -15952681 + MIR SINE MIR 60 142 -66 432 295 171 26 chr2 237304046 237304392 -15952191 - L2 LINE L2 0 3313 2918 302 278 11 11 chr2 237304606 237304696 -15951887 + GA-rich Low_complexity Low_complexity 3 92 0 343 326 51 23 chr2 237306338 237306513 -15950070 - MIR SINE MIR -13 249 70 2061 128 0 3 chr2 237306790 237307087 -15949496 - AluSx SINE Alu -16 296 1 1552 160 50 4 chr2 237307545 237307835 -15948748 - AluJo SINE Alu 0 311 10 336 362 29 9 chr2 237308836 237308941 -15947642 - MIR SINE MIR -59 149 43 504 147 22 0 chr2 237309296 237309432 -15947151 + (TG)n Simple_repeat Simple_repeat 2 140 0 202 182 204 0 chr2 237309776 237309820 -15946763 + MIR SINE MIR 48 100 -162 1090 189 78 0 chr2 237310549 237310740 -15945843 - MER58A DNA MER1_type 0 224 19 27 0 0 0 chr2 237310828 237310855 -15945728 + AT_rich Low_complexity Low_complexity 1 27 0 237 108 0 0 chr2 237310977 237311014 -15945569 + (TA)n Simple_repeat Simple_repeat 1 37 0 1921 155 3 29 chr2 237312082 237312391 -15944192 + AluSx SINE Alu 1 301 -11 231 228 163 0 chr2 237312450 237312542 -15944041 + MIR SINE MIR 156 262 0 33 25 0 0 chr2 237312998 237313038 -15943545 + AT_rich Low_complexity Low_complexity 1 40 0 1551 221 3 7 chr2 237313038 237313327 -15943256 - AluJb SINE Alu -24 288 1 187 245 122 71 chr2 237313544 237313642 -15942941 - MER5A DNA MER1_type 0 189 87 341 263 30 141 chr2 237313673 237313871 -15942712 - MER5B DNA MER1_type 0 178 3 266 270 67 0 chr2 237313886 237313975 -15942608 + MER5A DNA MER1_type 5 99 -90 2249 88 0 10 chr2 237313988 237314285 -15942298 - AluSg1 SINE Alu -15 294 1 238 264 23 0 chr2 237315721 237315808 -15940775 - L1MC4 LINE L1 -1340 6702 6614 213 180 0 0 chr2 237315809 237315859 -15940724 + (TA)n Simple_repeat Simple_repeat 1 50 0 * 570 157 0 22 chr2 237315858 237315992 -15940591 + (CA)n Simple_repeat Simple_repeat 2 132 0 3572 31 0 0 chr2 237320197 237320618 -15935965 - L1PA2 LINE L1 -3 6152 5732 287 343 9 9 chr2 237321049 237321154 -15935429 + L2 LINE L2 3208 3312 -1 475 104 13 0 chr2 237321480 237321557 -15935026 - MADE1 DNA Mariner 0 80 3 754 254 75 8 chr2 237322581 237322821 -15933762 - MARNA DNA Mariner -69 517 262 443 18 18 0 chr2 237324987 237325043 -15931540 + (CA)n Simple_repeat Simple_repeat 2 58 0 2187 122 0 0 chr2 237326435 237326730 -15929853 - AluSx SINE Alu -17 295 1 1764 157 83 6 chr2 237327683 237327996 -15928587 + MER1B DNA MER1_type 1 337 0 492 323 25 0 chr2 237328735 237328896 -15927687 + MIR SINE MIR 81 245 -17 2329 111 0 0 chr2 237329984 237330291 -15926292 - AluSx SINE Alu -5 307 1 675 227 40 10 chr2 237330455 237330653 -15925930 + MLT1A1 LTR MaLR 1 204 -161 2200 118 0 0 chr2 237330955 237331251 -15925332 - AluSx SINE Alu -16 296 1 1425 199 54 14 chr2 237331415 237331766 -15924817 + MLT1A1 LTR MaLR 1 365 0 680 200 0 105 chr2 237331943 237332133 -15924450 + MER20 DNA MER1_type 2 171 -48 2099 128 3 7 chr2 237332307 237332612 -15923971 + AluSx SINE Alu 1 304 -8 2398 101 3 0 chr2 237334129 237334435 -15922148 + AluSq SINE Alu 1 307 -6 2280 48 7 10 chr2 237335014 237335303 -15921280 - AluY SINE Alu -23 288 1 501 242 76 0 chr2 237336554 237336711 -15919872 + MIR SINE MIR 60 228 -34 261 0 0 0 chr2 237337561 237337590 -15918993 + (ATTG)n Simple_repeat Simple_repeat 2 30 0 1830 140 37 4 chr2 237337591 237337863 -15918720 - AluJb SINE Alu -31 281 1 440 307 52 42 chr2 237338118 237338310 -15918273 - MIR SINE MIR -23 239 46 2088 101 4 0 chr2 237340402 237340725 -15915858 + AluSc SINE Alu 1 324 0 1557 140 4 8 chr2 237341051 237341286 -15915297 + AluSx SINE Alu 1 234 -78 1689 172 10 10 chr2 237343611 237343902 -15912681 + AluJb SINE Alu 2 292 -20 237 326 63 0 chr2 237345042 237345137 -15911446 + MER91C DNA MER1_type 25 125 -15 818 166 140 10 chr2 237346199 237346392 -15910191 - MER58A DNA MER1_type -6 218 1 440 128 0 26 chr2 237346417 237346495 -15910088 + MADE1 DNA Mariner 2 77 -3 1638 201 7 3 chr2 237347978 237348271 -15908312 + AluJo SINE Alu 1 294 -18 189 0 0 0 chr2 237348814 237348835 -15907748 + (TTCA)n Simple_repeat Simple_repeat 3 23 0 669 211 9 0 chr2 237348836 237348950 -15907633 - FLAM_A SINE Alu -18 115 1 369 0 0 0 chr2 237349836 237349877 -15906706 + (TA)n Simple_repeat Simple_repeat 1 41 0 2117 123 7 3 chr2 237349877 237350177 -15906406 - AluSx SINE Alu -11 301 1 375 271 199 74 chr2 237351651 237352126 -15904457 + L2 LINE L2 2749 3313 0 25 51 0 0 chr2 237352151 237352190 -15904393 + AT_rich Low_complexity Low_complexity 1 39 0 1905 82 8 0 chr2 237352403 237352648 -15903935 - AluSq SINE Alu -65 248 2 376 281 104 26 chr2 237354094 237354286 -15902297 + L2 LINE L2 3106 3312 -1 325 335 11 85 chr2 237354423 237354611 -15901972 + MIR3 SINE MIR 20 193 -15 579 175 58 0 chr2 237354630 237354733 -15901850 + FRAM SINE Alu 38 146 -30 232 178 27 0 chr2 237355308 237355381 -15901202 + (TA)n Simple_repeat Simple_repeat 1 75 0 282 286 115 36 chr2 237355986 237356153 -15900430 - MIR SINE MIR -55 207 27 22 0 0 0 chr2 237356391 237356413 -15900170 + AT_rich Low_complexity Low_complexity 1 22 0 300 338 78 19 chr2 237358270 237358424 -15898159 + L3b LINE CR1 1128 1290 -293 9267 154 43 33 chr2 237358424 237359384 -15897199 + L1MC3 LINE L1 5764 6713 -1072 1993 146 12 12 chr2 237359384 237359727 -15896856 + MER2 DNA MER2_type 2 344 0 9267 154 43 33 chr2 237359727 237360337 -15896246 + L1MC3 LINE L1 6713 7361 -424 1968 134 4 0 chr2 237360337 237360612 -15895971 + AluSx SINE Alu 1 276 -36 9267 154 43 33 chr2 237360612 237361041 -15895542 + L1MC3 LINE L1 7361 7784 -1 2203 123 22 27 chr2 237361242 237361608 -15894975 + THE1B LTR MaLR 1 364 0 28 29 0 0 chr2 237361698 237361733 -15894850 + AT_rich Low_complexity Low_complexity 1 35 0 386 333 47 0 chr2 237361964 237362114 -15894469 + L3b LINE CR1 1292 1448 -135 315 333 0 9 chr2 237362685 237362796 -15893787 + L2 LINE L2 3193 3302 -11 2185 108 0 3 chr2 237363823 237364111 -15892472 + AluSg SINE Alu 1 287 -23 248 0 31 0 chr2 237364112 237364144 -15892439 + (TTAAA)n Simple_repeat Simple_repeat 3 35 0 22 0 0 0 chr2 237365020 237365042 -15891541 + AT_rich Low_complexity Low_complexity 1 22 0 378 0 0 0 chr2 237365578 237365620 -15890963 + (CA)n Simple_repeat Simple_repeat 2 43 0 27 81 0 0 chr2 237365681 237365743 -15890840 + AT_rich Low_complexity Low_complexity 1 62 0 1977 151 3 0 chr2 237366431 237366730 -15889853 + AluSx SINE Alu 1 300 -12 201 263 105 0 chr2 237367139 237367196 -15889387 + L2 LINE L2 3158 3220 -93 829 210 122 111 chr2 237367478 237367921 -15888662 + MLT1H LTR MaLR 102 549 0 2377 102 0 3 chr2 237368122 237368436 -15888147 - AluSq SINE Alu 0 313 1 2243 108 0 0 chr2 237369034 237369320 -15887263 + AluSx SINE Alu 1 286 -26 2157 25 16 4 chr2 237369460 237369703 -15886880 - L1PA3 LINE L1 0 6155 5910 575 273 24 6 chr2 237372968 237373133 -15883450 - MIR3 SINE MIR -21 187 20 352 259 56 97 chr2 237374450 237374666 -15881917 + L1M2 LINE L1 767 973 -5876 189 147 0 0 chr2 237374967 237375001 -15881582 + (T)n Simple_repeat Simple_repeat 1 34 0 189 0 0 0 chr2 237378931 237378952 -15877631 + (CTG)n Simple_repeat Simple_repeat 2 22 0 207 0 0 0 chr2 237379519 237379542 -15877041 + (CTG)n Simple_repeat Simple_repeat 1 23 0 314 335 73 84 chr2 237381133 237381420 -15875163 + L1M4 LINE L1 760 1043 -5806 333 100 0 0 chr2 237382176 237382226 -15874357 + (CTG)n Simple_repeat Simple_repeat 3 52 0 187 30 30 30 chr2 237382474 237382507 -15874076 + (TCC)n Simple_repeat Simple_repeat 2 34 0 4326 190 42 75 chr2 237382886 237383944 -15872639 + Cheshire DNA MER1_type 1001 2023 -397 28 48 0 0 chr2 237384955 237384997 -15871586 + AT_rich Low_complexity Low_complexity 1 42 0 706 85 0 0 chr2 237385259 237385353 -15871230 + AluY SINE Alu 210 303 -8 200 172 17 35 chr2 237385521 237385579 -15871004 + (CATATA)n Simple_repeat Simple_repeat 4 60 0 2361 154 70 47 chr2 237385637 237386125 -15870458 + MLT1D LTR MaLR 7 505 0 461 139 35 0 chr2 237386729 237386815 -15869768 + L1MC3 LINE L1 7553 7641 -144 486 212 0 12 chr2 237386861 237386946 -15869637 - FRAM SINE Alu -22 154 71 294 191 45 45 chr2 237386961 237387050 -15869533 + L1MC3 LINE L1 7681 7769 -16 315 384 52 7 chr2 237387076 237387383 -15869200 + L1M4 LINE L1 4228 4548 -2300 497 210 25 25 chr2 237388611 237388730 -15867853 - MIR SINE MIR -110 152 34 23 0 0 0 chr2 237389022 237389045 -15867538 + AT_rich Low_complexity Low_complexity 1 23 0 308 375 59 21 chr2 237389433 237389772 -15866811 - L2 LINE L2 -523 2791 2440 301 256 77 43 chr2 237389962 237390079 -15866504 - MER91C DNA MER1_type -19 121 1 6540 184 17 21 chr2 237390336 237391580 -15865003 - MER57-int LTR ERV1 -4182 3355 2117 1290 208 176 15 chr2 237391725 237392066 -15864517 + MSTD LTR MaLR 1 396 0 2343 90 0 10 chr2 237392179 237392479 -15864104 - AluSx SINE Alu -15 297 1 21 57 0 0 chr2 237392481 237392516 -15864067 + AT_rich Low_complexity Low_complexity 1 35 0 734 161 0 0 chr2 237393148 237393260 -15863323 - FRAM SINE Alu -7 169 58 259 266 0 0 chr2 237393360 237393426 -15863157 - AluJ/monomer SINE Alu -252 51 1 25 31 0 0 chr2 237393639 237393671 -15862912 + AT_rich Low_complexity Low_complexity 1 32 0 878 136 0 0 chr2 237393671 237393796 -15862787 - FLAM_C SINE Alu -18 125 1 2259 104 7 3 chr2 237394010 237394318 -15862265 - AluSp SINE Alu -4 309 1 1857 213 31 5 chr2 237394610 237394999 -15861584 - LTR10E LTR ERV1 -21 612 214 1931 140 11 0 chr2 237395335 237395621 -15860962 + AluSx SINE Alu 1 289 -23 225 0 0 0 chr2 237396873 237396898 -15859685 + (T)n Simple_repeat Simple_repeat 1 25 0 217 217 0 0 chr2 237398295 237398341 -15858242 + GA-rich Low_complexity Low_complexity 3 48 0 225 0 0 0 chr2 237400233 237400258 -15856325 + (TG)n Simple_repeat Simple_repeat 1 25 0 218 286 143 0 chr2 237400407 237400498 -15856085 - L2 LINE L2 -14 3299 3196 24 0 0 0 chr2 237400700 237400724 -15855859 + AT_rich Low_complexity Low_complexity 1 24 0 249 229 36 60 chr2 237400813 237400896 -15855687 - MER5A DNA MER1_type -80 109 29 238 259 43 95 chr2 237401165 237401281 -15855302 + MER5B DNA MER1_type 69 178 0 870 213 6 0 chr2 237401800 237401960 -15854623 + FRAM SINE Alu 2 162 -14 207 0 0 0 chr2 237402121 237402144 -15854439 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2095 125 7 0 chr2 237402146 237402435 -15854148 - AluSx SINE Alu -21 291 1 26 30 0 0 chr2 237402582 237402615 -15853968 + AT_rich Low_complexity Low_complexity 1 33 0 186 43 0 0 chr2 237402991 237403014 -15853569 + (TC)n Simple_repeat Simple_repeat 2 24 0 336 274 75 70 chr2 237403436 237403622 -15852961 + MER5A DNA MER1_type 3 189 0 547 195 71 120 chr2 237403738 237404005 -15852578 + MER112 DNA MER1_type 1 254 -2 21 82 0 0 chr2 237404421 237404470 -15852113 + AT_rich Low_complexity Low_complexity 1 49 0 944 267 47 11 chr2 237404716 237404993 -15851590 - L2 LINE L2 -341 2973 2687 938 144 0 9 chr2 237404993 237405201 -15851382 + AluY SINE Alu 1 292 -19 934 251 84 29 chr2 237405205 237405480 -15851103 - L2 LINE L2 -621 2693 2404 1694 210 69 88 chr2 237405483 237406074 -15850509 - MLT1G LTR MaLR 0 590 11 1119 241 193 17 chr2 237406086 237406505 -15850078 - L2 LINE L2 -914 2400 1908 2307 172 27 48 chr2 237407221 237407435 -15849148 - Tigger2a DNA MER2_type -2275 433 231 2232 118 3 3 chr2 237407435 237407739 -15848844 + AluSq SINE Alu 5 308 -5 2307 172 27 48 chr2 237407739 237407966 -15848617 - Tigger2a DNA MER2_type -2477 231 1 2217 109 0 3 chr2 237408472 237408776 -15847807 - AluSx SINE Alu -9 303 1 294 169 28 42 chr2 237409235 237409306 -15847277 + MLT1K LTR MaLR 519 588 0 577 323 115 11 chr2 237409467 237409814 -15846769 + L1MC4a LINE L1 5537 5919 -1889 272 283 81 0 chr2 237410208 237410307 -15846276 - MIR SINE MIR -47 215 109 263 329 103 0 chr2 237410869 237411015 -15845568 + MIR SINE MIR 43 203 -59 185 350 62 52 chr2 237411556 237411653 -15844930 + L2 LINE L2 3153 3250 -22 322 342 27 31 chr2 237411827 237412049 -15844534 - L2 LINE L2 -672 2642 2422 363 221 87 39 chr2 237412089 237412227 -15844356 - LTR40c LTR ERVL -106 359 203 340 213 87 120 chr2 237413771 237413813 -15842770 + Charlie8 DNA MER1_type 117 159 -171 2394 90 3 0 chr2 237413813 237414125 -15842458 + AluSq SINE Alu 1 313 0 340 213 87 120 chr2 237414125 237414232 -15842351 + Charlie8 DNA MER1_type 159 261 -69 321 216 0 14 chr2 237414309 237414383 -15842200 + Charlie8 DNA MER1_type 1356 1428 -989 899 150 84 0 chr2 237414743 237414910 -15841673 + L1MC1 LINE L1 6144 6324 -9 180 0 0 0 chr2 237415236 237415256 -15841327 + (T)n Simple_repeat Simple_repeat 1 20 0 229 259 284 0 chr2 237415327 237415443 -15841140 + MIR SINE MIR 46 194 -68 1350 142 110 78 chr2 237415784 237416065 -15840518 + AluJo SINE Alu 1 290 -22 234 300 92 8 chr2 237416351 237416471 -15840112 - MIR SINE MIR -1 261 132 35 24 0 0 chr2 237416767 237416809 -15839774 + AT_rich Low_complexity Low_complexity 1 42 0 23 78 0 0 chr2 237416977 237417028 -15839555 + AT_rich Low_complexity Low_complexity 1 51 0 499 285 81 43 chr2 237417155 237417341 -15839242 - MIR3 SINE MIR -2 206 14 2258 126 3 0 chr2 237417611 237417920 -15838663 + AluSx SINE Alu 1 310 -2 1557 211 14 47 chr2 237417958 237418102 -15838481 + MLT1A1 LTR MaLR 13 160 -205 1957 149 7 10 chr2 237418102 237418397 -15838186 + AluSx SINE Alu 1 294 -18 1557 211 14 47 chr2 237418397 237418617 -15837966 + MLT1A1 LTR MaLR 160 365 0 275 200 122 33 chr2 237418803 237418893 -15837690 + L1MC4 LINE L1 7803 7900 -142 1474 178 84 79 chr2 237418913 237419307 -15837276 - MSTD LTR MaLR 0 396 1 236 164 16 33 chr2 237419360 237419421 -15837162 + (CATATA)n Simple_repeat Simple_repeat 2 61 0 425 192 108 39 chr2 237419422 237419552 -15837031 + L1MC4 LINE L1 7902 8040 -2 383 221 105 0 chr2 237421033 237421128 -15835455 + MIR SINE MIR 56 160 -102 235 293 27 0 chr2 237421174 237421249 -15835334 - MIR SINE MIR 0 262 186 21 36 0 0 chr2 237421314 237421342 -15835241 + AT_rich Low_complexity Low_complexity 1 28 0 2350 103 0 0 chr2 237421777 237422079 -15834504 - AluY SINE Alu -9 302 1 1708 178 16 23 chr2 237422221 237422524 -15834059 - AluJb SINE Alu -11 301 1 5206 213 82 34 chr2 237423212 237425368 -15831215 - L1ME1 LINE L1 -5 6161 4112 1790 157 64 14 chr2 237425368 237425712 -15830871 + MLT1A1 LTR MaLR 5 365 0 5206 213 82 34 chr2 237425712 237425765 -15830818 - L1ME1 LINE L1 -2054 4112 4063 834 206 25 0 chr2 237425765 237425925 -15830658 - FAM SINE Alu -7 168 5 1566 197 17 10 chr2 237425935 237426229 -15830354 - AluJo SINE Alu -16 296 1 5206 213 82 34 chr2 237426229 237426527 -15830056 - L1ME1 LINE L1 -2111 4055 3497 1394 185 124 41 chr2 237426567 237426997 -15829586 + MLT1C LTR MaLR 1 618 -8 2640 231 106 40 chr2 237426999 237427996 -15828587 - L1ME1 LINE L1 -2681 3465 2388 1739 102 41 12 chr2 237427996 237428242 -15828341 + AluSq SINE Alu 1 253 -60 2640 231 106 40 chr2 237428242 237428344 -15828239 - L1ME1 LINE L1 -3758 2388 2294 2178 83 21 0 chr2 237430048 237430336 -15826247 - AluSx SINE Alu -18 294 1 933 87 0 24 chr2 237430344 237430470 -15826113 - FLAM_C SINE Alu -9 124 2 627 186 174 42 chr2 237432186 237432353 -15824230 + MER5A DNA MER1_type 1 189 0 1654 131 16 0 chr2 237432807 237433051 -15823532 - AluSx SINE Alu -22 290 43 373 299 134 21 chr2 237433670 237433864 -15822719 + MIR SINE MIR 38 253 -9 22 0 0 0 chr2 237433922 237433944 -15822639 + AT_rich Low_complexity Low_complexity 1 22 0 341 315 49 43 chr2 237435745 237435929 -15820654 - MIR SINE MIR -40 222 38 1062 188 0 0 chr2 237436382 237436558 -15820025 - AluJb SINE Alu -3 309 134 12095 131 16 4 chr2 237436558 237439326 -15817257 - L1PA11 LINE L1 0 6174 3359 260 252 219 0 chr2 237440594 237440713 -15815870 - MIR SINE MIR -58 204 60 2154 113 13 23 chr2 237441719 237442028 -15814555 + AluSq SINE Alu 1 306 -7 751 234 77 40 chr2 237443730 237444004 -15812579 + L1MCb LINE L1 1 284 -5761 324 228 79 0 chr2 237444082 237444183 -15812400 + MIR SINE MIR 128 236 -26 652 273 55 36 chr2 237444285 237444538 -15812045 - MIR SINE MIR 0 262 5 238 165 12 12 chr2 237444970 237445055 -15811528 + (TA)n Simple_repeat Simple_repeat 1 85 0 324 246 0 0 chr2 237445060 237445121 -15811462 + LTR16C LTR ERVL 287 347 -144 477 213 33 8 chr2 237445186 237445308 -15811275 + LTR16C LTR ERVL 367 491 0 223 328 46 46 chr2 237445380 237445511 -15811072 - MIR SINE MIR -118 144 14 1311 209 37 13 chr2 237447597 237447947 -15808636 + MLT1A1 LTR MaLR 13 365 0 30 27 0 0 chr2 237448009 237448046 -15808537 + AT_rich Low_complexity Low_complexity 1 37 0 1315 191 49 0 chr2 237448056 237448160 -15808423 - AluJo SINE Alu -76 236 139 423 0 0 0 chr2 237448160 237448207 -15808376 + (TTA)n Simple_repeat Simple_repeat 2 48 0 1315 191 49 0 chr2 237448207 237448327 -15808256 - AluJo SINE Alu -173 139 1 703 252 63 83 chr2 237449413 237449569 -15807014 - MIR SINE MIR -8 254 103 2223 107 0 26 chr2 237449569 237449878 -15806705 + AluSx SINE Alu 1 301 -11 703 252 63 83 chr2 237449878 237449975 -15806608 - MIR SINE MIR -159 103 6 1756 174 17 0 chr2 237450488 237450775 -15805808 + AluJo SINE Alu 5 296 -16 28 0 0 0 chr2 237451433 237451461 -15805122 + AT_rich Low_complexity Low_complexity 1 28 0 240 212 0 0 chr2 237452355 237452421 -15804162 + (TG)n Simple_repeat Simple_repeat 2 67 0 3379 166 62 15 chr2 237452465 237453194 -15803389 + L1MB7 LINE L1 5400 6162 -22 925 78 78 0 chr2 237453219 237453348 -15803235 - MER85 DNA T2_type 0 139 1 213 250 28 42 chr2 237454423 237454437 -15802146 - L2 LINE L2 -6 3266 3253 1990 161 3 31 chr2 237454437 237454791 -15801792 - MER2 DNA MER2_type 0 344 1 213 250 28 42 chr2 237454791 237454848 -15801735 - L2 LINE L2 -19 3253 3196 858 328 49 40 chr2 237454934 237455489 -15801094 - L2 LINE L2 -422 2892 2333 399 273 28 42 chr2 237456159 237456302 -15800281 + L2 LINE L2 3173 3313 0 183 156 0 0 chr2 237457281 237457313 -15799270 + (CATATA)n Simple_repeat Simple_repeat 3 34 0 348 284 83 0 chr2 237457502 237457611 -15798972 - MIR SINE MIR -82 180 63 2125 127 52 33 chr2 237457945 237458328 -15798255 - MSTB1 LTR MaLR 0 432 57 1933 140 32 0 chr2 237458328 237458613 -15797970 + AluSx SINE Alu 1 294 -18 2125 127 52 33 chr2 237458613 237458672 -15797911 - MSTB1 LTR MaLR -375 57 1 1068 266 134 10 chr2 237458693 237459087 -15797496 - MLT1H LTR MaLR 0 549 107 189 374 73 16 chr2 237459160 237459283 -15797300 + L2 LINE L2 3057 3186 -86 2129 186 62 20 chr2 237460662 237461114 -15795469 - MER70A LTR ERVL 0 472 2 2324 91 3 3 chr2 237461259 237461567 -15795016 - AluSc SINE Alu -1 308 1 475 250 9 0 chr2 237461635 237461743 -15794840 - MIR SINE MIR -62 146 38 241 210 97 0 chr2 237462047 237462109 -15794474 - L1MB5 LINE L1 -8 6166 6099 191 303 101 11 chr2 237462663 237462752 -15793831 + MIR SINE MIR 38 134 -128 2363 100 0 3 chr2 237462904 237463214 -15793369 - AluSc SINE Alu 0 309 1 230 297 102 39 chr2 237463465 237463593 -15792990 - MIR3 SINE MIR -69 139 4 360 191 117 0 chr2 237465334 237465428 -15791155 + MIR SINE MIR 60 164 -98 2559 155 11 20 chr2 237465751 237466189 -15790394 - Tigger2a DNA MER2_type 0 434 1 32 91 0 0 chr2 237466321 237466409 -15790174 + AT_rich Low_complexity Low_complexity 1 88 0 27 0 0 0 chr2 237466434 237466461 -15790122 + AT_rich Low_complexity Low_complexity 1 27 0 620 262 77 61 chr2 237466488 237467165 -15789418 - L1MC5 LINE L1 -187 7774 7172 1576 234 169 3 chr2 237467338 237467995 -15788588 - MER69 DNA AcHobo 0 2526 1761 2653 234 68 14 chr2 237468030 237468753 -15787830 - MER69 DNA AcHobo -459 767 6 1530 153 52 46 chr2 237469058 237469424 -15787159 - THE1C LTR MaLR -7 368 1 870 225 127 75 chr2 237469565 237470004 -15786579 - MLT1D LTR MaLR -2 465 1 357 315 102 74 chr2 237470040 237470392 -15786191 + L2 LINE L2 2900 3261 -11 578 317 30 30 chr2 237471614 237471844 -15784739 - MIR SINE MIR -16 246 17 4878 193 64 59 chr2 237471845 237473291 -15783292 - Charlie1a DNA MER1_type -1 1454 1 535 240 128 19 chr2 237473529 237474002 -15782581 + MLT1G LTR MaLR 22 572 -18 706 213 75 4 chr2 237474195 237474434 -15782149 - MER112 DNA MER1_type 0 256 1 2034 141 55 22 chr2 237476212 237476575 -15780008 - THE1C LTR MaLR 0 375 1 607 323 84 43 chr2 237476691 237477180 -15779403 - L1ME4a LINE L1 -294 5827 5319 2574 80 0 0 chr2 237477418 237477731 -15778852 + AluSq SINE Alu 1 313 0 280 260 5 37 chr2 237477810 237478000 -15778583 - L1MC3 LINE L1 -1 7784 7517 1429 207 39 21 chr2 237478005 237478372 -15778211 - MLT1A2 LTR MaLR -1 504 4 639 289 85 20 chr2 237480457 237480859 -15775724 + L1ME4a LINE L1 5500 5927 -194 325 241 103 14 chr2 237480874 237481019 -15775564 + L1ME4a LINE L1 5961 6118 -3 453 194 0 39 chr2 237481045 237481148 -15775435 - Tigger7 DNA MER2_type 0 2587 2489 * 1463 186 27 0 chr2 237481146 237481404 -15775179 - Tigger7 DNA MER2_type -2220 267 3 574 156 98 33 chr2 237481437 237481559 -15775024 + L2 LINE L2 3179 3308 -5 513 238 185 41 chr2 237482001 237482320 -15774263 + L1M4 LINE L1 2910 3274 -2872 24 0 0 0 chr2 237482534 237482558 -15774025 + AT_rich Low_complexity Low_complexity 1 24 0 464 313 56 0 chr2 237485124 237485284 -15771299 + MIR SINE MIR 59 227 -35 325 94 0 2 chr2 237485918 237485972 -15770611 - L1MA3 LINE L1 -126 6178 6127 720 136 8 0 chr2 237485972 237486092 -15770491 + L1MA3 LINE L1 6180 6305 0 1911 227 105 15 chr2 237486296 237486837 -15769746 - MLT1E LTR MaLR 0 593 4 307 207 103 11 chr2 237486839 237486926 -15769657 - MLT1K LTR MaLR -200 388 294 284 339 8 8 chr2 237486977 237487098 -15769485 - LTR67 LTR ERVL -10 547 427 194 188 104 0 chr2 237488042 237488090 -15768493 - MER5B DNA MER1_type 0 178 126 465 262 24 24 chr2 237488119 237488245 -15768338 + MER5B DNA MER1_type 50 175 -3 201 283 0 0 chr2 237488892 237488938 -15767645 - L2 LINE L2 -2 3270 3225 375 232 8 56 chr2 237488938 237489063 -15767520 + MER20B DNA MER1_type 1 119 -664 309 307 64 29 chr2 237489490 237489630 -15766953 - MER5B DNA MER1_type -30 148 4 201 283 0 0 chr2 237490275 237490321 -15766262 - L2 LINE L2 -2 3270 3225 1560 239 50 86 chr2 237490321 237490926 -15765657 + MER20B DNA MER1_type 1 571 -213 2001 153 0 3 chr2 237490926 237491227 -15765356 - AluSx SINE Alu -12 300 1 1560 239 50 86 chr2 237491227 237491434 -15765149 + MER20B DNA MER1_type 571 784 0 228 313 137 48 chr2 237491598 237491911 -15764672 - L2 LINE L2 -354 2960 2620 870 268 76 121 chr2 237492802 237493381 -15763202 + L2 LINE L2 2259 2811 -503 2062 128 7 0 chr2 237493468 237493758 -15762825 - AluSx SINE Alu -20 292 1 300 317 209 4 chr2 237493765 237493961 -15762622 + L2 LINE L2 2895 3154 -118 330 67 0 0 chr2 237493961 237494006 -15762577 + (TCTG)n Simple_repeat Simple_repeat 2 46 0 300 317 209 4 chr2 237494006 237494058 -15762525 + L2 LINE L2 3154 3194 -78 2180 129 53 55 chr2 237494101 237494346 -15762237 - MSTB1 LTR MaLR 0 432 187 2164 103 3 26 chr2 237494346 237494677 -15761906 + AluSp SINE Alu 1 313 0 2180 129 53 55 chr2 237494677 237494864 -15761719 - MSTB1 LTR MaLR -245 187 1 206 354 13 0 chr2 237496603 237496682 -15759901 - L2 LINE L2 -9 3263 3184 319 274 122 43 chr2 237496682 237496912 -15759671 + L1MDa LINE L1 1573 1820 -4720 5088 133 24 31 chr2 237497924 237498877 -15757706 - L1MA9 LINE L1 -5 6307 5362 726 212 69 0 chr2 237498872 237499061 -15757522 + L1MA9 LINE L1 5169 5370 -776 * 1269 206 43 0 chr2 237500401 237500654 -15755929 + Tigger7 DNA MER2_type 1 264 -469 401 113 0 16 chr2 237500657 237500719 -15755864 + Tigger7 DNA MER2_type 2491 2551 -36 4295 163 41 19 chr2 237500844 237501652 -15754931 + LTR1B LTR ERV1 1 826 0 209 83 28 0 chr2 237501696 237501732 -15754851 + (TG)n Simple_repeat Simple_repeat 1 37 0 310 296 65 0 chr2 237502169 237502277 -15754306 - L2 LINE L2 -3 3310 3196 188 266 81 32 chr2 237502754 237502878 -15753705 - L2 LINE L2 -557 2757 2628 351 0 0 0 chr2 237505785 237505824 -15750759 + (CA)n Simple_repeat Simple_repeat 2 40 0 27 29 0 0 chr2 237506097 237506131 -15750452 + AT_rich Low_complexity Low_complexity 1 34 0 1282 205 65 15 chr2 237506718 237507055 -15749528 + MLT1A1 LTR MaLR 10 363 -2 592 210 32 57 chr2 237507111 237507268 -15749315 - MER58B DNA MER1_type -14 327 175 204 40 0 0 chr2 237508741 237508766 -15747817 + (T)n Simple_repeat Simple_repeat 1 25 0 4192 169 31 7 chr2 237509251 237510085 -15746498 + L1MB7 LINE L1 5321 6174 -10 376 319 92 14 chr2 237511948 237512089 -15744494 + MER5A DNA MER1_type 38 189 0 198 295 88 134 chr2 237512178 237512520 -15744063 - L2 LINE L2 -5 3267 2942 242 347 71 20 chr2 237512756 237512854 -15743729 - L2 LINE L2 -23 3249 3147 1269 238 148 38 chr2 237513013 237513508 -15743075 - MLT1H LTR MaLR 0 549 1 285 324 39 10 chr2 237513551 237513653 -15742930 + MER5A DNA MER1_type 85 189 0 25 65 0 0 chr2 237514292 237514338 -15742245 + AT_rich Low_complexity Low_complexity 1 46 0 25 0 0 0 chr2 237514547 237514572 -15742011 + AT_rich Low_complexity Low_complexity 1 25 0 27 0 0 0 chr2 237515059 237515086 -15741497 + AT_rich Low_complexity Low_complexity 1 27 0 15022 149 42 16 chr2 237515386 237517303 -15739280 - L1MA3 LINE L1 0 7724 5858 216 0 0 0 chr2 237517303 237517327 -15739256 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 15022 149 42 16 chr2 237517327 237519398 -15737185 - L1MA3 LINE L1 -1866 5858 3842 2592 68 0 0 chr2 237519398 237519709 -15736874 - AluY SINE Alu 0 311 1 15022 149 42 16 chr2 237519709 237520068 -15736515 - L1MA3 LINE L1 -3882 3842 3494 192 77 0 0 chr2 237520068 237520094 -15736489 + (CAAG)n Simple_repeat Simple_repeat 2 27 0 15022 149 42 16 chr2 237520094 237521091 -15735492 - L1MA3 LINE L1 -4230 3494 2247 7668 152 23 5 chr2 237521082 237522301 -15734282 - L1MA3 LINE L1 -6322 1243 3 * 855 273 91 29 chr2 237522305 237522722 -15733861 + L1ME4a LINE L1 5492 5934 -187 28 29 0 0 chr2 237522829 237522864 -15733719 + AT_rich Low_complexity Low_complexity 1 35 0 475 224 112 21 chr2 237522975 237523118 -15733465 + MER103 DNA DNA 1 156 -10 204 298 0 0 chr2 237523153 237523200 -15733383 + polypurine Low_complexity Low_complexity 2 48 0 322 238 38 12 chr2 237523216 237523296 -15733287 - L1MC4 LINE L1 -149 7893 7812 1052 67 0 15 chr2 237523300 237523434 -15733149 + AluYb8 SINE Alu 1 132 -186 447 351 57 0 chr2 237523773 237524001 -15732582 - L1MC4a LINE L1 -393 7415 7175 2986 243 43 29 chr2 237524151 237525470 -15731113 - L1ME1 LINE L1 -3 6958 5618 11294 182 24 10 chr2 237525471 237527107 -15729476 + L1PB3 LINE L1 2755 4367 -1787 236 0 88 0 chr2 237527107 237527141 -15729442 + A-rich Low_complexity Low_complexity 3 39 0 11294 182 24 10 chr2 237527141 237528856 -15727727 + L1PB3 LINE L1 4367 6154 0 1605 207 57 21 chr2 237528864 237529285 -15727298 - L1ME1 LINE L1 -1314 5627 5192 388 293 78 5 chr2 237529256 237529444 -15727139 - L1ME1 LINE L1 -2169 4772 4572 * 595 217 29 14 chr2 237529445 237529583 -15727000 - L1ME1 LINE L1 -3426 3515 3376 930 288 65 9 chr2 237529650 237529987 -15726596 - L1ME1 LINE L1 -5252 1171 816 1775 122 88 34 chr2 237530080 237530400 -15726183 - THE1C LTR MaLR -5 370 34 282 56 0 0 chr2 237530675 237530735 -15725848 - AluSp/q SINE Alu 0 306 247 292 325 0 0 chr2 237531535 237531612 -15724971 + MER5B DNA MER1_type 1 77 -101 331 279 171 0 chr2 237532357 237532497 -15724086 - MER102b DNA MER1_type 0 341 178 304 368 50 16 chr2 237533931 237534113 -15722470 + MIR3 SINE MIR 20 207 -1 * 745 292 22 22 chr2 237534086 237534312 -15722271 + MIR SINE MIR 29 254 -8 2092 112 0 3 chr2 237534412 237534698 -15721885 + AluSc SINE Alu 1 285 -24 274 336 50 25 chr2 237536562 237536681 -15719902 - L2 LINE L2 -14 3258 3137 209 206 14 55 chr2 237538822 237538895 -15717688 + (CACCC)n Simple_repeat Simple_repeat 1 70 0 1077 85 92 0 chr2 237539059 237539212 -15717371 + AluSq SINE Alu 140 306 -7 185 384 73 30 chr2 237539920 237540084 -15716499 - L2 LINE L2 -4 3268 3098 2255 87 4 0 chr2 237540122 237540422 -15716161 + AluSq SINE Alu 5 305 0 251 279 267 0 chr2 237540685 237540771 -15715812 + MER5A DNA MER1_type 74 182 -7 225 250 0 19 chr2 237540834 237540886 -15715697 - MER5B DNA MER1_type -10 168 118 183 250 21 0 chr2 237541010 237541058 -15715525 + L2 LINE L2 3219 3267 -5 917 211 11 5 chr2 237541093 237541278 -15715305 - MER20 DNA MER1_type -3 216 31 340 274 30 44 chr2 237541552 237541687 -15714896 - L1ME4a LINE L1 -269 5852 5720 711 228 29 18 chr2 237541865 237542036 -15714547 - MER5A DNA MER1_type -3 186 14 2288 110 0 7 chr2 237542159 237542467 -15714116 + AluSx SINE Alu 1 306 -6 907 134 5 98 chr2 237542467 237542661 -15713922 + AluSg/x SINE Alu 135 310 0 328 246 344 22 chr2 237542661 237542844 -15713739 + MIR SINE MIR 21 262 0 570 154 18 38 chr2 237542971 237543103 -15713480 + MER5A DNA MER1_type 1 115 -63 1871 170 19 75 chr2 237543633 237544045 -15712538 - MLT1B LTR MaLR -1 389 1 258 81 0 0 chr2 237544059 237544096 -15712487 + (GA)n Simple_repeat Simple_repeat 2 38 0 25 0 0 0 chr2 237545060 237545085 -15711498 + AT_rich Low_complexity Low_complexity 1 25 0 182 321 47 71 chr2 237546067 237546279 -15710304 + L2 LINE L2 2600 2806 -508 333 216 104 72 chr2 237546521 237546646 -15709937 + L2 LINE L2 3180 3308 -5 186 228 141 0 chr2 237547642 237547732 -15708851 + MER5B DNA MER1_type 4 98 -80 17832 24 2 0 chr2 237547880 237550444 -15706139 - L1PA3 LINE L1 -279 5876 3310 2060 82 25 16 chr2 237550544 237550859 -15705724 + L1P LINE L1 4383 4700 -1446 273 300 56 44 chr2 237551003 237551093 -15705490 - MIR SINE MIR -171 91 1 1419 179 13 65 chr2 237551162 237551469 -15705114 - MLT1B LTR MaLR 0 390 100 3181 163 47 13 chr2 237551474 237552718 -15703865 - L1MA8 LINE L1 -19 6272 4932 688 199 0 0 chr2 237552718 237552849 -15703734 - MLT1B LTR MaLR -259 131 1 328 201 27 212 chr2 237553376 237553560 -15703023 - MER5B DNA MER1_type -2 176 27 1970 136 34 0 chr2 237553705 237553999 -15702584 - AluSx SINE Alu -8 304 1 202 209 23 0 chr2 237554204 237554247 -15702336 + GA-rich Low_complexity Low_complexity 1 44 0 249 323 101 10 chr2 237555465 237555564 -15701019 - L2 LINE L2 -3 3310 3203 180 268 0 18 chr2 237555730 237555786 -15700797 - L2 LINE L2 -1 3312 3258 219 175 119 140 chr2 237556118 237556261 -15700322 - L2 LINE L2 -182 3131 2992 1438 124 47 30 chr2 237556781 237557015 -15699568 + THE1B LTR MaLR 127 364 0 2015 99 4 0 chr2 237557035 237557297 -15699286 - AluY SINE Alu -2 309 47 308 296 202 10 chr2 237557556 237557759 -15698824 + MIR SINE MIR 16 257 -5 1734 186 13 0 chr2 237557842 237558143 -15698440 + AluJo SINE Alu 1 305 -7 251 324 29 0 chr2 237558301 237558403 -15698180 - MIR SINE MIR -66 196 92 277 359 28 14 chr2 237559294 237559436 -15697147 - MIR SINE MIR -111 151 8 318 326 45 0 chr2 237560030 237560119 -15696464 - L2 LINE L2 -37 3276 3184 706 93 8 34 chr2 237561121 237561152 -15695431 + L1MA9 LINE L1 6194 6224 -88 192 40 0 0 chr2 237561152 237561177 -15695406 + (CA)n Simple_repeat Simple_repeat 2 26 0 706 93 8 34 chr2 237561177 237561263 -15695320 + L1MA9 LINE L1 6224 6308 -4 248 324 0 0 chr2 237562974 237563048 -15693535 - MIR3 SINE MIR -31 177 104 205 297 85 35 chr2 237564280 237564435 -15692148 + MIR SINE MIR 4 162 -61 200 288 15 15 chr2 237564477 237564543 -15692040 - L2 LINE L2 -61 3211 3146 183 328 92 34 chr2 237564697 237564816 -15691767 - L2 LINE L2 -562 2752 2627 808 250 37 48 chr2 237564821 237565089 -15691494 - MLT2B3 LTR ERVL -7 547 283 743 161 0 0 chr2 237565296 237565414 -15691169 - MLT1A2 LTR MaLR -256 118 1 215 238 238 56 chr2 237566421 237566547 -15690036 + MER5A DNA MER1_type 1 149 -29 2460 186 82 9 chr2 237566757 237567296 -15689287 + L1MD3 LINE L1 7410 7987 -8 7104 63 15 6 chr2 237567296 237568181 -15688402 + L1PA8 LINE L1 5279 6171 -1 202 227 92 20 chr2 237568460 237568562 -15688021 - MIR3 SINE MIR -53 155 37 494 228 44 63 chr2 237568612 237568770 -15687813 + MER5A DNA MER1_type 35 189 0 407 232 21 11 chr2 237570102 237570197 -15686386 + MIR SINE MIR 48 143 -119 770 202 80 93 chr2 237570197 237570525 -15686058 + L1ME3A LINE L1 5791 6117 -47 1021 199 60 45 chr2 237571397 237571664 -15684919 + MLT1A2 LTR MaLR 104 374 0 272 297 77 26 chr2 237572601 237572756 -15683827 - MER5A DNA MER1_type -26 163 1 266 164 194 15 chr2 237573057 237573124 -15683459 + L2 LINE L2 3193 3271 -1 315 220 0 0 chr2 237574300 237574391 -15682192 + (TG)n Simple_repeat Simple_repeat 1 91 0 2293 87 3 0 chr2 237574512 237574799 -15681784 - L1PA6 LINE L1 -3 6151 5864 311 317 93 33 chr2 237575317 237575500 -15681083 - MIR3 SINE MIR -2 206 13 476 247 149 7 chr2 237575584 237575738 -15680845 + MIR SINE MIR 21 196 -66 348 319 43 38 chr2 237575801 237576036 -15680547 + L2 LINE L2 2383 2618 -696 653 230 60 36 chr2 237576045 237576313 -15680270 + MLT2B3 LTR ERVL 1 265 -188 368 209 86 19 chr2 237576336 237576441 -15680142 + MER61A LTR ERV1 1 112 -231 268 316 21 34 chr2 237576541 237576672 -15679911 - MIR SINE MIR -86 122 17 2440 77 0 3 chr2 237576853 237577150 -15679433 - AluY SINE Alu -15 296 1 24 0 0 0 chr2 237577331 237577355 -15679228 + AT_rich Low_complexity Low_complexity 1 24 0 288 0 0 0 chr2 237579758 237579790 -15676793 + (TTA)n Simple_repeat Simple_repeat 3 34 0 7067 71 13 0 chr2 237579790 237581084 -15675499 - L1PA7 LINE L1 -18 6136 4727 2570 105 472 7 chr2 237581081 237581670 -15674913 + L1P LINE L1 3114 3976 -2170 * 5011 27 0 0 chr2 237581668 237582252 -15674331 - L1PA2 LINE L1 -946 5200 4617 8109 17 10 1 chr2 237582252 237583189 -15673394 + L1PA2 LINE L1 5211 6155 0 25 0 0 0 chr2 237583199 237583224 -15673359 + AT_rich Low_complexity Low_complexity 1 25 0 2662 136 43 2 chr2 237583224 237583664 -15672919 + L1P LINE L1 3961 4418 -1728 180 0 0 0 chr2 237583963 237583983 -15672600 + (TTG)n Simple_repeat Simple_repeat 3 22 0 707 182 125 6 chr2 237584693 237584869 -15671714 + L1MB8 LINE L1 5006 5202 -944 688 191 0 96 chr2 237584870 237585027 -15671556 + FLAM_C SINE Alu 2 143 0 4057 193 37 23 chr2 237585031 237586003 -15670580 + L1MB8 LINE L1 5193 6174 -4 387 0 0 0 chr2 237586133 237586176 -15670407 + (TG)n Simple_repeat Simple_repeat 2 44 0 2917 211 23 27 chr2 237586774 237587241 -15669342 - L1ME1 LINE L1 -100 6066 5601 2249 109 0 6 chr2 237587241 237587553 -15669030 - AluSg SINE Alu 0 310 1 2917 211 23 27 chr2 237587553 237587783 -15668800 - L1ME1 LINE L1 -565 5601 5372 204 191 48 79 chr2 237588161 237588224 -15668359 - MIR3 SINE MIR -7 201 141 185 250 0 19 chr2 237588575 237588627 -15667956 + MIR SINE MIR 24 74 -188 214 276 69 38 chr2 237588920 237589111 -15667472 - MIR SINE MIR -10 252 2 458 216 22 97 chr2 237589196 237589381 -15667202 - MIR SINE MIR -22 240 75 1061 174 9 58 chr2 237590365 237590589 -15665994 - MER20 DNA MER1_type 0 219 7 20777 49 53 4 chr2 237591006 237593709 -15662874 + L1P LINE L1 526 3361 -2785 2492 81 3 0 chr2 237594170 237594478 -15662105 - AluY SINE Alu -2 309 1 1539 248 12 9 chr2 237594554 237594893 -15661690 + MER58B DNA MER1_type 2 341 0 2180 96 4 4 chr2 237595442 237595722 -15660861 - AluSx SINE Alu -32 280 1 1559 155 69 7 chr2 237595869 237596159 -15660424 + AluJo SINE Alu 5 312 0 1688 171 137 0 chr2 237597288 237597609 -15658974 + MLT1A1 LTR MaLR 1 365 0 1522 222 95 7 chr2 237597625 237598048 -15658535 + LTR40c LTR ERVL 1 460 -5 216 67 0 0 chr2 237598893 237598923 -15657660 + (TG)n Simple_repeat Simple_repeat 2 31 0 341 281 6 90 chr2 237599295 237599462 -15657121 + MER5A DNA MER1_type 37 189 0 42 20 0 0 chr2 237600100 237600149 -15656434 + GC_rich Low_complexity Low_complexity 1 49 0 24 0 0 0 chr2 237600335 237600359 -15656224 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr2 237600464 237600486 -15656097 + AT_rich Low_complexity Low_complexity 1 22 0 461 261 89 59 chr2 237600738 237600941 -15655642 + MER63A DNA MER1_type 1 209 -1 2388 66 3 3 chr2 237601664 237601952 -15654631 - AluSq SINE Alu -18 295 8 463 223 223 7 chr2 237602168 237602307 -15654276 - MER5A DNA MER1_type 0 189 21 246 276 75 68 chr2 237602351 237602513 -15654070 + MIR3 SINE MIR 31 192 -16 27 0 0 0 chr2 237604302 237604329 -15652254 + AT_rich Low_complexity Low_complexity 1 27 0 1008 224 10 0 chr2 237604341 237604542 -15652041 - MER58A DNA MER1_type -13 211 9 23 78 0 0 chr2 237604810 237604861 -15651722 + AT_rich Low_complexity Low_complexity 1 51 0 279 0 0 0 chr2 237606102 237606133 -15650450 + (TG)n Simple_repeat Simple_repeat 1 31 0 388 278 187 0 chr2 237607229 237607427 -15649156 + L1ME LINE L1 5545 5779 -342 315 232 0 53 chr2 237607750 237607845 -15648738 + L1MC4 LINE L1 6614 6703 -1339 1073 137 0 9 chr2 237607845 237608080 -15648503 + (TA)n Simple_repeat Simple_repeat 1 232 0 1791 161 7 0 chr2 237608095 237608375 -15648208 - AluSx SINE Alu -30 282 1 256 259 89 21 chr2 237608523 237608641 -15647942 + MIR SINE MIR 66 191 -65 189 107 0 0 chr2 237608685 237608713 -15647870 + (CAT)n Simple_repeat Simple_repeat 2 29 0 183 263 121 30 chr2 237609227 237609326 -15647257 + MIR SINE MIR 94 201 -61 336 340 78 29 chr2 237609791 237610135 -15646448 + L1MC4 LINE L1 7533 7893 -149 391 294 61 38 chr2 237610160 237610453 -15646130 + L1ME4a LINE L1 5602 5901 -220 292 290 37 9 chr2 237610863 237610971 -15645612 + MIR SINE MIR 45 162 -46 754 236 24 18 chr2 237611057 237611222 -15645361 - FRAM SINE Alu 0 166 1 207 0 0 0 chr2 237611278 237611301 -15645282 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1243 67 11 6 chr2 237611936 237612115 -15644468 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 328 167 13 13 chr2 237612115 237612193 -15644390 + CT-rich Low_complexity Low_complexity 4 81 0 2019 108 54 3 chr2 237612193 237612488 -15644095 - AluSx SINE Alu 0 312 3 464 295 18 0 chr2 237612576 237612688 -15643895 - L2 LINE L2 -25 3247 3134 276 77 0 0 chr2 237612870 237612909 -15643674 + (TATAA)n Simple_repeat Simple_repeat 1 39 0 2139 118 24 0 chr2 237613002 237613299 -15643284 + AluSx SINE Alu 1 304 -8 1926 123 3 14 chr2 237614392 237614701 -15641882 + AluSx SINE Alu 1 306 0 7072 72 17 5 chr2 237615239 237616769 -15639814 + L1PA7 LINE L1 4598 6144 -10 662 171 0 26 chr2 237617369 237617486 -15639097 + MER81 DNA DNA 1 114 0 184 156 0 0 chr2 237618659 237618691 -15637892 - L2 LINE L2 0 3272 3241 3277 19 0 14 chr2 237618929 237619318 -15637265 + L1PA3 LINE L1 5786 6169 0 12572 208 42 13 chr2 237619318 237622414 -15634169 + L1PBa LINE L1 2633 5806 -1056 184 156 0 0 chr2 237622629 237622661 -15633922 - L2 LINE L2 0 3272 3241 3383 8 0 0 chr2 237622899 237623252 -15633331 + L1PA3 LINE L1 5786 6138 -17 213 65 0 0 chr2 237623252 237623283 -15633300 + (TTAA)n Simple_repeat Simple_repeat 1 31 0 1094 112 0 6 chr2 237626742 237626921 -15629662 + (TCCA)n Simple_repeat Simple_repeat 3 180 0 1021 183 44 98 chr2 237627635 237627974 -15628609 - MER33 DNA MER1_type -10 314 1 22 35 0 0 chr2 237628041 237628070 -15628513 + AT_rich Low_complexity Low_complexity 1 29 0 283 306 14 0 chr2 237628338 237628410 -15628173 - MER91B DNA MER1_type -117 73 1 238 356 10 19 chr2 237628613 237628717 -15627866 - MIR SINE MIR -76 132 30 180 250 0 71 chr2 237628807 237628863 -15627720 - L2 LINE L2 -55 3258 3207 1674 136 4 19 chr2 237628886 237629150 -15627433 + AluJo SINE Alu 10 269 -43 369 0 0 0 chr2 237629151 237629192 -15627391 + (TAA)n Simple_repeat Simple_repeat 2 42 0 1852 22 0 31 chr2 237630230 237630453 -15626130 - L1PA5 LINE L1 -116 6038 5823 2113 129 16 0 chr2 237630485 237630788 -15625795 - AluSx SINE Alu -4 308 1 547 59 0 0 chr2 237631242 237631310 -15625273 - Alu SINE Alu -10 301 234 341 281 6 90 chr2 237631643 237631810 -15624773 + MER5A DNA MER1_type 37 189 0 216 0 0 0 chr2 237633078 237633102 -15623481 + (A)n Simple_repeat Simple_repeat 1 24 0 2457 77 3 0 chr2 237633701 237634001 -15622582 - AluY SINE Alu -10 301 1 261 227 0 15 chr2 237634276 237634342 -15622241 + MLT1H LTR MaLR 95 159 -390 231 271 59 51 chr2 237634475 237634593 -15621990 + MLT1H LTR MaLR 404 522 -27 2220 115 3 0 chr2 237634933 237635228 -15621355 + AluSg SINE Alu 1 296 -14 249 247 0 13 chr2 237636174 237636251 -15620332 + L1PBa LINE L1 1847 1922 -4941 22 0 0 0 chr2 237636730 237636752 -15619831 + AT_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr2 237636800 237636836 -15619747 + AT_rich Low_complexity Low_complexity 1 36 0 3610 163 83 1 chr2 237637116 237637860 -15618723 + L1PBa LINE L1 1837 2641 -4222 7925 59 128 6 chr2 237637861 237638969 -15617614 + L1P LINE L1 13 1255 -4891 295 105 263 0 chr2 237639820 237639877 -15616706 + MADE1 DNA Mariner 9 80 0 283 243 14 0 chr2 237639930 237640004 -15616579 - MER116 DNA Mariner -5 75 1 188 178 0 22 chr2 237640010 237640055 -15616528 + (TATATG)n Simple_repeat Simple_repeat 5 48 0 354 59 20 0 chr2 237640106 237640157 -15616426 + MADE1 DNA Mariner 27 78 -2 842 283 7 42 chr2 237640401 237640709 -15615874 + L1ME1 LINE L1 5865 6161 -5 2544 96 50 16 chr2 237640730 237641093 -15615490 + THE1C LTR MaLR 1 375 0 27 29 0 0 chr2 237641854 237641888 -15614695 + AT_rich Low_complexity Low_complexity 1 34 0 196 308 0 0 chr2 237641988 237642040 -15614543 - L2 LINE L2 -7 3306 3255 1271 188 102 52 chr2 237642226 237642551 -15614032 - MER2 DNA MER2_type 0 344 4 2092 136 7 7 chr2 237642961 237643302 -15613281 + AluSx SINE Alu 1 341 0 1168 251 90 45 chr2 237643362 237643893 -15612690 + HAL1 LINE L1 1375 1929 -578 24 0 0 0 chr2 237644056 237644080 -15612503 + AT_rich Low_complexity Low_complexity 1 24 0 1756 249 62 32 chr2 237644938 237645585 -15610998 + L2 LINE L2 2177 2842 -472 8371 113 4 2 chr2 237645821 237647039 -15609544 + L1P LINE L1 3899 5118 -1028 2357 82 0 0 chr2 237648475 237648767 -15607816 + AluSc SINE Alu 3 294 -15 26 64 0 0 chr2 237648954 237649001 -15607582 + AT_rich Low_complexity Low_complexity 1 47 0 4784 172 13 7 chr2 237649373 237650627 -15605956 + L1PB3 LINE L1 4741 6004 -150 3124 98 27 47 chr2 237650628 237651139 -15605444 + L1P LINE L1 3423 3923 -2223 433 263 131 61 chr2 237651395 237651593 -15604990 - MIR SINE MIR -25 237 26 813 154 0 0 chr2 237651617 237651734 -15604849 - AluSx SINE Alu -6 304 188 1002 67 0 0 chr2 237651734 237651854 -15604729 - AluSx SINE Alu -193 120 1 925 264 84 25 chr2 237652011 237652333 -15604250 + MER58B DNA MER1_type 1 341 0 2064 148 0 0 chr2 237652399 237652697 -15603886 + AluSx SINE Alu 1 298 -14 3524 164 19 75 chr2 237653246 237653974 -15602609 + LTR8 LTR ERV1 2 688 -3 378 61 0 0 chr2 237653978 237654027 -15602556 + (CA)n Simple_repeat Simple_repeat 2 50 0 235 269 74 43 chr2 237654518 237654706 -15601877 + L2 LINE L2 2855 3047 -266 2185 108 3 7 chr2 237654769 237655078 -15601505 + AluSq SINE Alu 1 308 0 431 276 45 0 chr2 237655191 237655325 -15601258 + MIR SINE MIR 119 258 -4 1862 126 22 0 chr2 237655519 237655797 -15600786 + AluSx SINE Alu 1 284 -28 2979 154 56 13 chr2 237656242 237656774 -15599809 + LTR36 LTR ERV1 56 610 -1 396 225 181 20 chr2 237657238 237657389 -15599194 + MIR SINE MIR 34 206 -56 508 232 181 7 chr2 237657452 237657590 -15598993 - MER5A DNA MER1_type -6 183 22 617 177 89 89 chr2 237657793 237657816 -15598767 + MER5B DNA MER1_type 21 43 -135 2065 117 7 0 chr2 237657816 237658107 -15598476 + AluSx SINE Alu 1 293 -19 617 177 89 89 chr2 237658107 237658241 -15598342 + MER5B DNA MER1_type 42 178 0 594 293 70 70 chr2 237658657 237659026 -15597557 + MLT1I LTR MaLR 11 379 -30 253 200 0 71 chr2 237659572 237659642 -15596941 - L2 LINE L2 -69 3244 3180 456 192 200 16 chr2 237660028 237660153 -15596430 - MER5A DNA MER1_type -21 168 21 442 270 161 14 chr2 237660315 237660526 -15596057 - MIR SINE MIR 0 262 21 354 296 178 7 chr2 237661617 237661769 -15594814 - MER5B DNA MER1_type 0 178 1 1480 251 77 21 chr2 237662009 237662487 -15594096 + Charlie4a DNA MER1_type 1 505 -3 2152 121 0 3 chr2 237663491 237663788 -15592795 + AluSx SINE Alu 1 296 -16 3812 78 23 23 chr2 237664184 237664378 -15592205 + L1PB1 LINE L1 5634 5827 -324 2283 97 10 0 chr2 237664378 237664678 -15591905 + AluSq SINE Alu 1 303 -10 3812 78 23 23 chr2 237664678 237664997 -15591586 + L1PB1 LINE L1 5826 6147 -4 416 223 0 54 chr2 237665735 237665865 -15590718 - L1MA8 LINE L1 -19 6272 6150 257 235 12 25 chr2 237666650 237666731 -15589852 + GA-rich Low_complexity Low_complexity 2 81 0 626 228 185 42 chr2 237666765 237666954 -15589629 - MIR SINE MIR -13 249 34 340 290 131 0 chr2 237667074 237667181 -15589402 - L2 LINE L2 -6 3307 3187 301 326 0 0 chr2 237667289 237667378 -15589205 + L1MC4 LINE L1 6615 6703 -1339 * 315 315 0 0 chr2 237667308 237667397 -15589186 - L1MC4 LINE L1 -1339 6703 6615 315 315 0 0 chr2 237667398 237667487 -15589096 - L1MC4 LINE L1 -1339 6703 6615 287 221 0 13 chr2 237667492 237667569 -15589014 + (TA)n Simple_repeat Simple_repeat 2 77 0 226 277 72 0 chr2 237667505 237667588 -15588995 - L1MC4 LINE L1 -1339 6703 6615 * 2339 69 7 13 chr2 237668396 237668699 -15587884 - AluY SINE Alu -10 301 1 208 239 172 37 chr2 237668699 237668833 -15587750 + MIR SINE MIR 94 245 -17 404 262 103 0 chr2 237669353 237669479 -15587104 + MIR SINE MIR 7 145 -117 180 0 0 0 chr2 237669906 237669926 -15586657 + (CAGCC)n Simple_repeat Simple_repeat 1 20 0 2193 123 3 0 chr2 237670748 237671058 -15585525 - AluY SINE Alu 0 311 1 421 255 66 71 chr2 237671132 237671344 -15585239 + MER58C DNA MER1_type 4 214 -1 251 303 214 0 chr2 237671350 237671439 -15585144 + MIR3 SINE MIR 15 122 -86 1278 287 106 14 chr2 237671997 237672683 -15583900 + L1ME LINE L1 4729 5479 -683 1681 129 17 31 chr2 237672713 237673000 -15583583 + AluSx SINE Alu 1 283 -29 863 127 0 70 chr2 237673324 237673482 -15583101 - AluJb SINE Alu -165 147 1 5609 79 16 74 chr2 237673489 237673900 -15582683 - L1MA1 LINE L1 -164 6138 5755 384 61 0 0 chr2 237673900 237673949 -15582634 + U5 snRNA snRNA 1 49 -67 5609 79 16 74 chr2 237673949 237674380 -15582203 - L1MA1 LINE L1 -547 5755 5300 25 0 0 0 chr2 237674429 237674454 -15582129 + AT_rich Low_complexity Low_complexity 1 25 0 2066 135 3 0 chr2 237674660 237674963 -15581620 - AluSx SINE Alu -8 304 1 304 293 67 110 chr2 237675681 237675981 -15580602 + L1MC4 LINE L1 7753 8039 -3 298 156 109 16 chr2 237676827 237676891 -15579692 - MER5A DNA MER1_type -111 78 9 19082 43 6 9 chr2 237677074 237679563 -15577020 + L1P1 LINE L1 2979 5456 -699 23 0 0 0 chr2 237679757 237679780 -15576803 + AT_rich Low_complexity Low_complexity 1 23 0 493 226 213 12 chr2 237680314 237680478 -15576105 + MIR SINE MIR 66 262 0 338 252 36 36 chr2 237680648 237680759 -15575824 - MLT1G LTR MaLR -1 554 444 420 288 99 1 chr2 237680815 237681058 -15575525 - MLT1G LTR MaLR -300 290 1 2267 103 0 26 chr2 237681134 237681444 -15575139 - AluSq SINE Alu -11 302 1 336 289 10 10 chr2 237681555 237681652 -15574931 - MIR SINE MIR -10 252 156 1808 221 18 13 chr2 237682194 237682641 -15573942 - L1MA9 LINE L1 -7 6305 5857 2797 83 3 16 chr2 237682938 237683311 -15573272 + L1PA8 LINE L1 5805 6172 0 851 161 12 24 chr2 237683345 237683513 -15573070 + L1PB3 LINE L1 5989 6154 0 29 60 0 0 chr2 237683845 237683895 -15572688 + AT_rich Low_complexity Low_complexity 1 50 0 1935 104 22 0 chr2 237683902 237684170 -15572413 - AluSg SINE Alu -36 274 1 224 313 102 42 chr2 237685255 237685421 -15571162 + MIR SINE MIR 8 183 -79 857 181 0 0 chr2 237686736 237686885 -15569698 + MLT2B3 LTR ERVL 1 149 -405 2442 95 0 0 chr2 237687154 237687458 -15569125 + AluSc SINE Alu 1 304 -5 304 239 98 54 chr2 237687544 237687636 -15568947 - L2 LINE L2 -22 3250 3155 302 292 132 0 chr2 237687638 237687782 -15568801 + L1ME4a LINE L1 5764 5926 -195 921 167 92 6 chr2 237687826 237688000 -15568583 - MER20 DNA MER1_type -2 217 29 2286 115 0 0 chr2 237688344 237688656 -15567927 + AluSx SINE Alu 1 312 0 225 293 38 66 chr2 237689002 237689108 -15567475 - L2 LINE L2 -1 3312 3210 370 232 66 128 chr2 237689264 237689475 -15567108 - MIR SINE MIR -50 212 15 1535 153 4 4 chr2 237689778 237690013 -15566570 + AluSx SINE Alu 61 295 -17 44 70 0 0 chr2 237690064 237690150 -15566433 + AT_rich Low_complexity Low_complexity 1 86 0 224 238 0 0 chr2 237690199 237690241 -15566342 + (CATATA)n Simple_repeat Simple_repeat 2 43 0 2520 47 7 3 chr2 237690269 237690570 -15566013 + AluSp SINE Alu 1 302 -11 1461 158 32 14 chr2 237691208 237691301 -15565282 + AluSx SINE Alu 25 115 -197 198 0 0 0 chr2 237691301 237691323 -15565260 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1461 158 32 14 chr2 237691323 237691508 -15565075 + AluSx SINE Alu 115 308 -4 243 317 24 0 chr2 237691684 237691766 -15564817 + MIR3 SINE MIR 120 203 -5 31 44 0 0 chr2 237691830 237691875 -15564708 + AT_rich Low_complexity Low_complexity 1 45 0 11575 133 17 27 chr2 237692104 237694022 -15562561 - L1PA12 LINE L1 -959 5187 3289 6925 88 10 0 chr2 237694024 237695016 -15561567 + L1PA12 LINE L1 5164 6168 0 188 245 11 117 chr2 237695639 237695733 -15560850 + L2 LINE L2 3230 3313 0 349 320 84 51 chr2 237697203 237697381 -15559202 - MIR3 SINE MIR -7 201 18 2191 149 39 3 chr2 237698483 237698818 -15557765 - MER7A DNA MER2_type 0 346 2 244 283 33 0 chr2 237699101 237699193 -15557390 + L1MCc LINE L1 24 118 -6305 293 122 0 0 chr2 237699197 237699238 -15557345 - MER57A LTR ERV1 -66 337 297 303 266 126 105 chr2 237699917 237700345 -15556238 - L1M2 LINE L1 -5622 1227 791 206 208 144 40 chr2 237700503 237700628 -15555955 + MIR3 SINE MIR 4 141 -67 353 266 57 16 chr2 237701359 237701483 -15555100 - L1MC4a LINE L1 -1947 5861 5733 325 161 0 0 chr2 237702164 237702220 -15554363 + MIR SINE MIR 92 147 -61 499 275 38 25 chr2 237702281 237702441 -15554142 - Charlie8 DNA MER1_type -2214 203 42 739 156 0 57 chr2 237703413 237703567 -15553016 - FLAM_A SINE Alu 0 147 1 601 263 155 40 chr2 237703740 237704037 -15552546 - L2 LINE L2 0 3313 2983 549 289 136 45 chr2 237704050 237704403 -15552180 - L2 LINE L2 -2178 1136 752 1633 161 29 21 chr2 237704804 237705084 -15551499 + AluJo SINE Alu 1 282 -30 2237 106 7 0 chr2 237705085 237705387 -15551196 + AluSx SINE Alu 1 304 -8 261 0 0 0 chr2 237705402 237705431 -15551152 + (CA)n Simple_repeat Simple_repeat 2 30 0 1126 38 8 0 chr2 237705879 237706010 -15550573 - AluY SINE Alu -179 132 1 21 0 0 0 chr2 237706038 237706059 -15550524 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 237706070 237706098 -15550485 + AT_rich Low_complexity Low_complexity 1 28 0 242 324 56 21 chr2 237706413 237706555 -15550028 - MIR SINE MIR -55 207 61 2325 121 13 61 chr2 237708937 237709188 -15547395 - THE1B LTR MaLR -3 361 132 2480 66 0 13 chr2 237709188 237709490 -15547093 + AluY SINE Alu 1 298 -13 2325 121 13 61 chr2 237709490 237709617 -15546966 - THE1B LTR MaLR -232 132 1 1229 175 10 0 chr2 237709617 237709823 -15546760 + MER2 DNA MER2_type 3 210 -135 27 0 0 0 chr2 237709845 237709872 -15546711 + AT_rich Low_complexity Low_complexity 1 27 0 2155 117 20 0 chr2 237711277 237711575 -15545008 + AluSx SINE Alu 1 304 -8 532 273 28 17 chr2 237712012 237712188 -15544395 + MER5B DNA MER1_type 1 178 0 265 276 62 48 chr2 237712203 237712348 -15544235 + MER5A DNA MER1_type 43 189 0 279 152 65 0 chr2 237713158 237713204 -15543379 + MER112 DNA MER1_type 1 49 -211 600 307 151 59 chr2 237713583 237714416 -15542167 + L2 LINE L2 1399 2308 -1006 799 231 59 5 chr2 237714590 237714776 -15541807 - L2 LINE L2 -460 2854 2659 1457 197 131 33 chr2 237714784 237715205 -15541378 + MLT1C LTR MaLR 6 467 0 800 224 73 0 chr2 237715210 237715429 -15541154 - L2 LINE L2 -659 2655 2421 861 179 65 12 chr2 237715513 237715681 -15540902 - LTR32 LTR ERVL -7 464 288 1113 190 81 0 chr2 237715681 237715902 -15540681 + L1P LINE L1 3671 3909 -2237 408 277 40 0 chr2 237716159 237716260 -15540323 + MER3 DNA MER1_type 1 105 -104 366 213 0 0 chr2 237716308 237716383 -15540200 + MER3 DNA MER1_type 109 183 -26 344 161 65 0 chr2 237716389 237716451 -15540132 + MER3 DNA MER1_type 144 209 0 258 196 78 0 chr2 237716412 237716463 -15540120 - MER3 DNA MER1_type -119 90 36 * 244 233 0 0 chr2 237716472 237716515 -15540068 + MER5A DNA MER1_type 40 82 -107 550 214 0 51 chr2 237716518 237716635 -15539948 - AluJo SINE Alu -93 219 109 516 238 0 0 chr2 237716670 237716771 -15539812 + MER5A DNA MER1_type 89 189 0 * 658 205 33 0 chr2 237716771 237716889 -15539694 - MER5A DNA MER1_type -63 126 5 1405 60 22 22 chr2 237717158 237717341 -15539242 - L1PA4 LINE L1 -3 6152 5970 436 200 26 116 chr2 237717518 237717673 -15538910 + MER20B DNA MER1_type 29 169 -614 1544 206 25 54 chr2 237717993 237718400 -15538183 - MLT2C1 LTR ERVL -2 395 1 180 0 0 0 chr2 237719166 237719186 -15537397 + (T)n Simple_repeat Simple_repeat 1 20 0 3239 68 2 2 chr2 237721682 237722106 -15534477 - L1PA8 LINE L1 0 6172 5749 228 35 0 0 chr2 237723997 237724026 -15532557 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2103 83 18 11 chr2 237724029 237724305 -15532278 - AluY SINE Alu -33 278 1 23 0 0 0 chr2 237726007 237726030 -15530553 + AT_rich Low_complexity Low_complexity 1 23 0 365 302 56 71 chr2 237726335 237726449 -15530134 + MIR SINE MIR 14 128 -134 2317 97 20 0 chr2 237726449 237726749 -15529834 - AluSc SINE Alu 0 309 4 365 302 56 71 chr2 237726749 237726886 -15529697 + MIR SINE MIR 128 261 -1 2267 110 3 7 chr2 237727015 237727324 -15529259 - AluSx SINE Alu -4 308 1 462 208 47 0 chr2 237727325 237727431 -15529152 + MER5A DNA MER1_type 3 113 -76 555 211 16 105 chr2 237727492 237727682 -15528901 - MER5B DNA MER1_type -5 173 1 * 559 198 0 25 chr2 237727682 237727801 -15528782 + MER5B DNA MER1_type 63 178 0 193 125 31 0 chr2 237728117 237728149 -15528434 - L2 LINE L2 -86 3227 3195 2377 71 0 0 chr2 237728628 237728937 -15527646 - AluY SINE Alu 0 309 1 857 247 27 0 chr2 237729433 237729656 -15526927 - AluSx SINE Alu -83 229 1 277 362 136 9 chr2 237730349 237730570 -15526013 + L2 LINE L2 2983 3231 -41 216 285 134 64 chr2 237735174 237735346 -15521237 + MER5A DNA MER1_type 6 189 0 1826 128 35 35 chr2 237735503 237735817 -15520766 + AluSx SINE Alu 1 314 0 2334 93 0 13 chr2 237736521 237736823 -15519760 + AluSq SINE Alu 2 299 -14 521 244 50 28 chr2 237737036 237737216 -15519367 + L2 LINE L2 3129 3312 -1 2238 128 41 22 chr2 237737346 237737713 -15518870 + THE1C LTR MaLR 1 374 -1 312 70 0 0 chr2 237738693 237738736 -15517847 + (TA)n Simple_repeat Simple_repeat 2 44 0 370 268 140 59 chr2 237739481 237739571 -15517012 + HAL1 LINE L1 7 88 -2419 2018 122 7 18 chr2 237739571 237739901 -15516682 + AluSx SINE Alu 1 327 0 370 268 140 59 chr2 237739901 237740130 -15516453 + HAL1 LINE L1 88 353 -2154 240 171 13 53 chr2 237740263 237740339 -15516244 + HAL1 LINE L1 981 1053 -1454 1946 123 3 14 chr2 237742002 237742311 -15514272 + AluSx SINE Alu 1 306 0 7604 29 2 1 chr2 237742849 237744403 -15512180 + L1PA3 LINE L1 4598 6152 -3 334 318 90 24 chr2 237744424 237744635 -15511948 + L1M4 LINE L1 4888 5112 -1034 2316 98 3 0 chr2 237745433 237745730 -15510853 - AluSx SINE Alu -14 298 1 356 305 50 13 chr2 237746902 237747141 -15509442 + L2 LINE L2 2511 2758 -556 2221 116 3 6 chr2 237747165 237747476 -15509107 - AluSg SINE Alu 0 310 1 223 295 0 54 chr2 237747515 237747627 -15508956 + L2 LINE L2 2857 2962 -310 879 218 171 61 chr2 237747643 237748083 -15508500 + MLT1D LTR MaLR 16 503 -2 208 299 0 15 chr2 237748227 237748294 -15508289 + L2 LINE L2 3209 3274 -39 301 281 78 16 chr2 237748333 237748461 -15508122 + L2 LINE L2 3136 3271 -1 2247 121 3 0 chr2 237748513 237748819 -15507764 + AluSx SINE Alu 1 307 -5 2152 115 20 0 chr2 237749628 237749932 -15506651 + AluSq SINE Alu 1 310 -3 2256 117 0 3 chr2 237751346 237751646 -15504937 - AluSq SINE Alu -14 299 1 243 302 137 7 chr2 237753099 237753238 -15503345 + MIR SINE MIR 32 188 -74 760 177 15 0 chr2 237753239 237753369 -15503214 - MER20 DNA MER1_type 0 219 88 1640 187 45 0 chr2 237753724 237753837 -15502746 + AluJo SINE Alu 8 114 -198 225 83 0 0 chr2 237753837 237753873 -15502710 + (TAA)n Simple_repeat Simple_repeat 2 37 0 1640 187 45 0 chr2 237753873 237754048 -15502535 + AluJo SINE Alu 114 309 -3 2479 69 3 0 chr2 237754055 237754360 -15502223 + AluY SINE Alu 1 306 -5 1735 202 43 6 chr2 237754651 237755003 -15501580 + MLT1A1 LTR MaLR 1 365 0 385 289 102 6 chr2 237755259 237755425 -15501158 + MIR SINE MIR 81 262 0 239 204 136 68 chr2 237755473 237755561 -15501022 + MER103 DNA DNA 1 94 -72 423 0 0 0 chr2 237756578 237756625 -15499958 + (CA)n Simple_repeat Simple_repeat 1 47 0 260 242 11 0 chr2 237757096 237757191 -15499392 + (TATATG)n Simple_repeat Simple_repeat 1 96 0 189 0 0 0 chr2 237757800 237757821 -15498762 + (A)n Simple_repeat Simple_repeat 1 21 0 2096 126 3 10 chr2 237758174 237758476 -15498107 + AluSx SINE Alu 1 300 -12 231 36 0 0 chr2 237758703 237758731 -15497852 + (CA)n Simple_repeat Simple_repeat 1 28 0 292 340 43 25 chr2 237758908 237759143 -15497440 - L1MC/D LINE L1 -2027 5781 5543 211 308 162 8 chr2 237760922 237761039 -15495544 + MIR3 SINE MIR 65 199 -9 200 282 71 0 chr2 237761339 237761424 -15495159 - MER5A DNA MER1_type -97 92 2 198 306 67 22 chr2 237761848 237761982 -15494601 - L3b LINE CR1 -154 1429 1290 335 250 64 36 chr2 237763090 237763230 -15493353 + MIR SINE MIR 32 175 -87 231 276 138 0 chr2 237763351 237763503 -15493080 - L1MC/D LINE L1 -2199 3947 3775 766 148 17 0 chr2 237763512 237763626 -15492957 - Tigger3b DNA MER2_type 0 1231 1116 300 100 0 0 chr2 237763626 237763666 -15492917 - THE1B LTR MaLR 0 355 316 962 149 0 7 chr2 237763666 237763839 -15492744 + AluSg/x SINE Alu 146 317 0 1918 123 33 45 chr2 237763843 237764176 -15492407 - THE1B LTR MaLR -33 331 3 5524 142 66 21 chr2 237764316 237764421 -15492162 - Tigger3b DNA MER2_type -1946 1082 983 2439 76 3 0 chr2 237764421 237764722 -15491861 + AluY SINE Alu 1 302 -9 5524 142 66 21 chr2 237764722 237765325 -15491258 - Tigger3b DNA MER2_type -2045 983 311 354 45 0 0 chr2 237765325 237765369 -15491214 + (CA)n Simple_repeat Simple_repeat 1 44 0 5524 142 66 21 chr2 237765369 237765694 -15490889 - Tigger3b DNA MER2_type -2717 311 2 717 176 155 27 chr2 237766341 237766489 -15490094 + MER45A DNA AcHobo 12 178 0 3606 152 36 49 chr2 237767107 237767156 -15489427 - L1MB3 LINE L1 0 6183 6135 2244 91 7 10 chr2 237767156 237767452 -15489131 - AluSx SINE Alu -17 295 1 3606 152 36 49 chr2 237767452 237768151 -15488432 - L1MB3 LINE L1 -48 6135 5445 316 289 16 74 chr2 237768360 237768550 -15488033 - MIR SINE MIR -67 195 17 829 167 86 48 chr2 237769055 237769265 -15487318 + MER20 DNA MER1_type 1 218 -1 2439 69 0 7 chr2 237770154 237770459 -15486124 - AluY SINE Alu -8 303 1 1062 191 33 0 chr2 237770667 237770877 -15485706 + Tigger6a DNA MER2_type 4 220 -863 1829 178 83 0 chr2 237770893 237771280 -15485303 - LOR1b LTR ERV1 -42 419 1 3320 188 112 11 chr2 237771280 237772066 -15484517 + Tigger6a DNA MER2_type 219 1083 0 250 218 103 39 chr2 237772803 237772881 -15483702 + MLT1J LTR MaLR 98 180 -331 228 225 42 14 chr2 237773101 237773172 -15483411 + LTR33A LTR ERVL 449 521 -2 877 303 35 6 chr2 237773188 237773505 -15483078 + L2 LINE L2 2628 2953 -361 303 144 64 46 chr2 237774294 237774467 -15482116 + (TA)n Simple_repeat Simple_repeat 1 176 0 457 71 71 0 chr2 237774473 237774543 -15482040 - MADE1 DNA Mariner -5 75 1 217 51 51 0 chr2 237774559 237774598 -15481985 + (TA)n Simple_repeat Simple_repeat 2 42 0 212 165 38 38 chr2 237774635 237774714 -15481869 + (TA)n Simple_repeat Simple_repeat 1 79 0 327 300 62 12 chr2 237775207 237775367 -15481216 + L1MC4a LINE L1 5741 5908 -1900 2114 133 7 3 chr2 237775567 237775868 -15480715 + AluSx SINE Alu 1 302 -10 2006 138 10 10 chr2 237776190 237776501 -15480082 + AluJb SINE Alu 1 311 -1 203 164 36 0 chr2 237776504 237776559 -15480024 + A-rich Low_complexity Low_complexity 4 60 0 242 116 23 0 chr2 237776641 237776684 -15479899 + (TATG)n Simple_repeat Simple_repeat 4 47 0 623 88 0 0 chr2 237777139 237777219 -15479364 + AluS SINE Alu 3 82 -230 2190 129 0 3 chr2 237777767 237778076 -15478507 - AluSx SINE Alu -2 310 3 357 233 171 0 chr2 237778351 237778527 -15478056 - LTR16C LTR ERVL -62 429 224 554 219 209 15 chr2 237778770 237778971 -15477612 + MIR SINE MIR 22 261 -1 539 78 0 13 chr2 237779171 237779248 -15477335 - MADE1 DNA Mariner -2 78 3 2241 107 0 3 chr2 237780112 237780421 -15476162 - AluSx SINE Alu -4 308 1 1057 192 110 28 chr2 237780916 237781234 -15475349 - MER2 DNA MER2_type 0 344 1 359 233 27 0 chr2 237783380 237783453 -15473130 - MIR3 SINE MIR -28 180 106 2130 134 3 0 chr2 237784184 237784482 -15472101 + AluSx SINE Alu 1 299 -13 1911 167 13 105 chr2 237785544 237786070 -15470513 - MLT1D LTR MaLR -8 497 20 61 15 0 0 chr2 237786829 237786897 -15469686 + AT_rich Low_complexity Low_complexity 1 68 0 2654 156 92 28 chr2 237787074 237787652 -15468931 + L1MB7 LINE L1 5547 6161 -23 32 43 0 0 chr2 237787660 237787706 -15468877 + AT_rich Low_complexity Low_complexity 1 46 0 1956 109 64 0 chr2 237787858 237788018 -15468565 - AluSq SINE Alu -12 301 153 194 0 39 0 chr2 237788018 237788044 -15468539 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1956 109 64 0 chr2 237788044 237788166 -15468417 - AluSq SINE Alu -160 153 1 1598 66 0 0 chr2 237788368 237788565 -15468018 + MER107 DNA MER1_type 1 197 0 255 170 0 0 chr2 237788865 237788912 -15467671 + (TGGA)n Simple_repeat Simple_repeat 1 47 0 473 287 8 8 chr2 237788997 237789126 -15467457 + L2 LINE L2 3184 3312 -1 339 295 149 3 chr2 237789295 237789464 -15467119 - MIR SINE MIR -64 198 1 23 54 0 0 chr2 237789508 237789545 -15467038 + AT_rich Low_complexity Low_complexity 1 37 0 2090 120 64 19 chr2 237789556 237789915 -15466668 - THE1C LTR MaLR 0 375 1 1225 223 63 23 chr2 237789933 237790629 -15465954 - Charlie2 DNA MER1_type -80 2782 2013 1897 183 8 25 chr2 237790629 237790996 -15465587 + MLT1A1 LTR MaLR 1 361 -4 1225 223 63 23 chr2 237790996 237791111 -15465472 - Charlie2 DNA MER1_type -849 2013 1904 712 272 57 47 chr2 237791165 237791463 -15465120 - Charlie2 DNA MER1_type -2481 301 1 2286 124 11 32 chr2 237791916 237792288 -15464295 - THE1B LTR MaLR 0 364 1 261 220 0 0 chr2 237795104 237795154 -15461429 + L2 LINE L2 3211 3260 -12 1684 167 14 7 chr2 237795234 237795528 -15461055 + AluJb SINE Alu 1 296 -16 1086 257 75 5 chr2 237795764 237796188 -15460395 + L1M4 LINE L1 2270 2723 -3423 806 114 0 18 chr2 237796296 237796462 -15460121 - L1P LINE L1 -733 5422 5260 246 286 16 71 chr2 237796528 237796780 -15459803 - L1M4 LINE L1 -1334 4812 4575 579 269 91 37 chr2 237796821 237797008 -15459575 - L1M4 LINE L1 -1806 4340 4165 2006 121 78 29 chr2 237797008 237797355 -15459228 - THE1B LTR MaLR 0 364 1 579 269 91 37 chr2 237797355 237797681 -15458902 - L1M4 LINE L1 -1981 4165 3795 390 274 112 71 chr2 237797707 237798003 -15458580 - L1ME3A LINE L1 -11 6159 5852 726 121 65 0 chr2 237798226 237798350 -15458233 - MLT1A2 LTR MaLR 0 374 243 * 4141 135 16 4 chr2 237798340 237799043 -15457540 - MER50 LTR ERV1 -23 711 1 402 143 0 0 chr2 237799170 237799247 -15457336 + (TTC)n Simple_repeat Simple_repeat 2 78 0 2236 129 0 0 chr2 237799255 237799566 -15457017 - AluSx SINE Alu -1 311 1 695 198 19 6 chr2 237799567 237799729 -15456854 - MLT1A2 LTR MaLR -210 164 1 1224 148 52 77 chr2 237800283 237800607 -15455976 - MER33 DNA MER1_type -4 320 5 2154 109 0 0 chr2 237801178 237801486 -15455097 - AluSx SINE Alu 0 308 1 215 293 189 16 chr2 237801545 237801736 -15454847 - L2 LINE L2 -44 3269 3046 2102 139 3 0 chr2 237801869 237802170 -15454413 + AluSx SINE Alu 1 302 -10 24 0 0 0 chr2 237803058 237803082 -15453501 + AT_rich Low_complexity Low_complexity 1 24 0 400 210 35 42 chr2 237803617 237803760 -15452823 - L1ME4a LINE L1 -16 6105 5964 344 244 30 30 chr2 237803762 237803815 -15452768 - L1ME4a LINE L1 -230 5891 5839 2331 92 0 19 chr2 237803815 237804132 -15452451 - AluY SINE Alu 0 311 1 344 244 30 30 chr2 237804132 237804242 -15452341 - L1ME4a LINE L1 -281 5840 5728 2989 166 10 0 chr2 237804257 237804770 -15451813 + Tigger7 DNA MER2_type 1 518 -215 1622 192 6 28 chr2 237804770 237805088 -15451495 + AluJb SINE Alu 1 311 -1 1763 136 7 59 chr2 237805212 237805498 -15451085 - AluSx SINE Alu -12 300 30 1888 151 3 0 chr2 237805643 237805928 -15450655 - AluJb SINE Alu -26 286 1 342 333 12 67 chr2 237806332 237806497 -15450086 - L2 LINE L2 0 3272 3117 303 266 7 28 chr2 237808154 237808297 -15448286 - L1ME4a LINE L1 0 6121 5982 313 261 157 0 chr2 237808299 237808433 -15448150 - L1ME4a LINE L1 -195 5926 5772 207 0 0 0 chr2 237811569 237811592 -15444991 + (T)n Simple_repeat Simple_repeat 1 23 0 212 277 50 30 chr2 237811692 237811793 -15444790 + MER5A DNA MER1_type 65 167 -22 * 369 282 27 9 chr2 237811712 237811822 -15444761 - MER5A DNA MER1_type -72 117 6 1368 186 0 0 chr2 237812676 237812913 -15443670 - MLT1A1 LTR MaLR 0 365 129 21 0 0 0 chr2 237814001 237814022 -15442561 + AT_rich Low_complexity Low_complexity 1 21 0 563 329 105 35 chr2 237814677 237815412 -15441171 - L2 LINE L2 0 3272 2492 245 346 51 13 chr2 237815638 237815794 -15440789 - MLT1K LTR MaLR -71 517 356 1527 174 27 4 chr2 237816552 237816810 -15439773 + AluSx SINE Alu 3 266 -46 309 372 37 5 chr2 237817062 237817250 -15439333 - L1ME4a LINE L1 -344 5777 5584 21 0 0 0 chr2 237818226 237818247 -15438336 + AT_rich Low_complexity Low_complexity 1 21 0 800 188 154 4 chr2 237818726 237818966 -15437617 - MER5C DNA MER1_type 0 324 49 2042 122 30 0 chr2 237819351 237819647 -15436936 + AluSg SINE Alu 1 305 -5 876 108 28 17 chr2 237819647 237819823 -15436760 + GA-rich Low_complexity Low_complexity 1 178 0 203 44 22 89 chr2 237819826 237819871 -15436712 + (GGAGAA)n Simple_repeat Simple_repeat 2 43 0 216 188 25 38 chr2 237819875 237819955 -15436628 + GA-rich Low_complexity Low_complexity 4 82 0 180 77 0 0 chr2 237820009 237820035 -15436548 + (GGAA)n Simple_repeat Simple_repeat 4 29 0 2157 109 3 0 chr2 237820577 237820862 -15435721 - AluSx SINE Alu -26 286 1 1858 178 9 6 chr2 237821021 237821353 -15435230 + L1MB2 LINE L1 5835 6167 -4 189 268 0 0 chr2 237821808 237821849 -15434734 - L2 LINE L2 -6 3307 3267 2436 117 39 28 chr2 237822090 237822450 -15434133 - THE1B LTR MaLR 0 364 1 212 186 17 0 chr2 237823045 237823104 -15433479 + (TA)n Simple_repeat Simple_repeat 1 60 0 2328 74 7 0 chr2 237823186 237823484 -15433099 + AluY SINE Alu 1 300 -11 2095 106 3 23 chr2 237823998 237824300 -15432283 - AluSx SINE Alu -16 296 1 22 35 0 0 chr2 237824760 237824789 -15431794 + AT_rich Low_complexity Low_complexity 1 29 0 2071 106 15 0 chr2 237825103 237825377 -15431206 - AluSg1 SINE Alu -31 278 1 2134 110 13 0 chr2 237825377 237825676 -15430907 - AluSq SINE Alu -10 303 1 186 150 0 0 chr2 237927608 237927648 -15328935 + (CAG)n Simple_repeat Simple_repeat 1 40 0 303 211 0 0 chr2 237927687 237927777 -15328806 + (CCA)n Simple_repeat Simple_repeat 3 92 0 1774 113 0 0 chr2 237928552 237928783 -15327800 - AluSx SINE Alu -81 231 1 266 313 48 57 chr2 237929380 237929731 -15326852 - L2 LINE L2 -721 2593 2246 297 236 0 0 chr2 237930454 237930560 -15326023 + (TGG)n Simple_repeat Simple_repeat 3 108 0 186 150 0 0 chr2 237930598 237930638 -15325945 + (CTG)n Simple_repeat Simple_repeat 1 40 0 1875 116 41 17 chr2 237931298 237931557 -15325026 + AluJb SINE Alu 13 281 -31 324 0 0 0 chr2 237931557 237931593 -15324990 + (CA)n Simple_repeat Simple_repeat 2 37 0 1875 116 41 17 chr2 237931593 237931626 -15324957 + AluJb SINE Alu 281 312 0 2186 120 0 0 chr2 237931780 237932072 -15324511 - AluSx SINE Alu -9 303 12 1226 130 0 0 chr2 237932337 237932514 -15324069 - AluSg/x SINE Alu -9 303 127 3220 104 65 28 chr2 237933228 237933736 -15322847 + MER1A DNA MER1_type 1 527 0 2206 109 0 26 chr2 237933768 237934071 -15322512 - AluSx SINE Alu -17 295 1 848 245 21 0 chr2 237934314 237934502 -15322081 + MER70A LTR ERVL 281 472 0 5315 177 73 2 chr2 237934502 237935501 -15321082 + MER70A-int LTR ERVL 1 1070 -3953 750 271 29 71 chr2 237935504 237935854 -15320729 - MLT2C1 LTR ERVL -3 394 60 441 141 45 181 chr2 237936060 237936237 -15320346 - L1MC5 LINE L1 -107 7854 7702 2811 276 79 32 chr2 237936246 237937564 -15319019 - L2 LINE L2 -192 3121 1748 273 83 0 0 chr2 237937682 237937718 -15318865 - FLAM_A SINE Alu -13 120 85 * 418 138 0 0 chr2 237937717 237937775 -15318808 + Charlie3 DNA MER1_type 195 252 -2458 576 136 0 0 chr2 237937775 237937856 -15318727 - FRAM SINE Alu -74 102 22 808 213 6 12 chr2 237937857 237938017 -15318566 + MER97a DNA MER1_type? 21 179 -715 671 280 54 55 chr2 237938277 237938902 -15317681 - L1MEd LINE L1 -861 1629 1010 2745 159 54 69 chr2 237938966 237939311 -15317272 - MER7C DNA MER2_type -2426 602 253 1980 109 3 25 chr2 237939311 237939595 -15316988 - AluSx SINE Alu -34 278 1 2745 159 54 69 chr2 237939595 237939809 -15316774 - MER7C DNA MER2_type -2775 253 50 3333 123 62 6 chr2 237939809 237940305 -15316278 + MER1A DNA MER1_type 4 527 0 2745 159 54 69 chr2 237940305 237940355 -15316228 - MER7C DNA MER2_type -2978 50 1 1307 147 5 0 chr2 237940516 237940707 -15315876 - AluSg SINE Alu -118 192 1 2097 115 26 0 chr2 237940729 237941034 -15315549 - AluSp SINE Alu 0 313 1 2091 121 40 32 chr2 237941190 237941562 -15315021 - THE1C LTR MaLR 0 375 1 23 0 0 0 chr2 237941567 237941590 -15314993 + AT_rich Low_complexity Low_complexity 1 23 0 1318 172 0 18 chr2 237942023 237942244 -15314339 - AluJo SINE Alu -95 217 1 3292 133 17 32 chr2 237942439 237942563 -15314020 - MER1A DNA MER1_type -2173 527 403 2238 123 0 0 chr2 237942563 237942872 -15313711 - AluSx SINE Alu -3 309 1 3292 133 17 32 chr2 237942872 237943280 -15313303 - MER1A DNA MER1_type -2297 403 3 201 351 27 9 chr2 237943353 237943464 -15313119 + MIR SINE MIR 20 132 -130 26 0 0 0 chr2 237943567 237943593 -15312990 + AT_rich Low_complexity Low_complexity 1 26 0 770 163 0 0 chr2 237943621 237943744 -15312839 - FLAM_C SINE Alu -10 123 1 225 108 0 0 chr2 237944043 237944080 -15312503 + (TTTG)n Simple_repeat Simple_repeat 3 39 0 1887 160 0 0 chr2 237944082 237944363 -15312220 - AluJb SINE Alu -31 281 1 1742 154 15 0 chr2 237944599 237944871 -15311712 - AluSx SINE Alu -36 276 1 2363 87 7 0 chr2 237944975 237945273 -15311310 + AluSx SINE Alu 11 310 -2 2380 142 65 2 chr2 237945428 237945829 -15310754 - MSTA LTR MaLR -2 426 1 688 218 0 0 chr2 237945844 237945977 -15310606 - FLAM_C SINE Alu 0 133 1 2175 126 7 0 chr2 237946179 237946480 -15310103 + AluSx SINE Alu 1 303 -9 1614 177 4 4 chr2 237946606 237946883 -15309700 - AluJo SINE Alu -35 277 1 24 32 0 0 chr2 237947041 237947072 -15309511 + AT_rich Low_complexity Low_complexity 1 31 0 15144 147 45 13 chr2 237948644 237950690 -15305893 + L1M1 LINE L1 1703 3682 -3990 2666 62 0 0 chr2 237950690 237950998 -15305585 + AluY SINE Alu 1 308 -3 15144 147 45 13 chr2 237950998 237951589 -15304994 + L1M1 LINE L1 3682 4253 -3419 1709 184 0 23 chr2 237951589 237951899 -15304684 + AluJb SINE Alu 1 303 -9 15144 147 45 13 chr2 237951899 237953534 -15303049 + L1M1 LINE L1 4253 6166 -1506 207 0 0 0 chr2 237953534 237953557 -15303026 + (CAA)n Simple_repeat Simple_repeat 2 24 0 15144 147 45 13 chr2 237953557 237954347 -15302236 + L1M1 LINE L1 6166 6929 -743 1745 103 0 0 chr2 237954347 237954571 -15302012 - AluSq SINE Alu -89 224 1 1790 161 27 17 chr2 237955042 237955340 -15301243 + AluJo SINE Alu 6 306 -6 1808 167 6 22 chr2 237955586 237955897 -15300686 + AluJb SINE Alu 2 307 -5 265 186 0 51 chr2 237956555 237956614 -15299969 - MLT2B2 LTR ERVL -2 513 458 21 57 0 0 chr2 237956617 237956652 -15299931 + AT_rich Low_complexity Low_complexity 1 35 0 1336 184 6 94 chr2 237956768 237957099 -15299484 + AluSq SINE Alu 1 302 -11 274 136 0 0 chr2 237957148 237957192 -15299391 + U5 snRNA snRNA 1 44 -72 2269 88 7 0 chr2 237957202 237957532 -15299051 - AluSp SINE Alu 0 332 1 260 237 39 25 chr2 237957720 237957813 -15298770 - MLT2F LTR ERVL -502 126 32 1808 147 0 38 chr2 237959136 237959429 -15297154 - AluJb SINE Alu -30 282 1 617 315 149 39 chr2 237959507 237960218 -15296365 + L2 LINE L2 462 1093 -2221 2180 112 0 0 chr2 237960218 237960503 -15296080 - AluY SINE Alu -26 285 1 617 315 149 39 chr2 237960503 237961269 -15295314 + L2 LINE L2 1093 2102 -1212 2090 105 0 74 chr2 237961307 237961630 -15294953 + AluSx SINE Alu 14 312 0 1641 207 44 36 chr2 237961884 237962271 -15294312 - MLT1B LTR MaLR 0 390 1 238 211 0 0 chr2 237963580 237963632 -15292951 + (TGG)n Simple_repeat Simple_repeat 3 54 0 186 150 0 0 chr2 237963664 237963704 -15292879 + (CTG)n Simple_repeat Simple_repeat 1 40 0 2254 106 0 0 chr2 237964339 237964632 -15291951 + AluSq SINE Alu 10 302 -11 1760 183 0 6 chr2 237965219 237965531 -15291052 - AluJo SINE Alu -1 311 2 2077 124 3 0 chr2 237966048 237966394 -15290189 + AluSx SINE Alu 1 347 0 1275 254 58 15 chr2 237966398 237966796 -15289787 + MER20B DNA MER1_type 4 418 -365 547 230 34 0 chr2 237966799 237967006 -15289577 - LTR37A LTR ERV1 -234 192 18 322 258 98 70 chr2 237967019 237967263 -15289320 - L1M4 LINE L1 -1252 4894 4644 229 219 0 0 chr2 237967271 237967312 -15289271 + tRNA-Val-GTG tRNA tRNA 1 41 -35 286 327 68 25 chr2 237967518 237967680 -15288903 - MIR SINE MIR -73 189 21 245 98 24 0 chr2 237969232 237969273 -15287310 + (GAAAA)n Simple_repeat Simple_repeat 5 46 0 1270 255 39 14 chr2 237969340 237969697 -15286886 + MLT2F LTR ERVL 222 587 -76 598 228 24 0 chr2 237969917 237970040 -15286543 + AluJo/FLAM SINE Alu 3 128 -174 2060 135 0 0 chr2 237970043 237970367 -15286216 + AluSx SINE Alu 1 324 0 2195 126 153 5 chr2 237970386 237970759 -15285824 + MSTA LTR MaLR 1 428 0 885 172 28 0 chr2 237970761 237970958 -15285625 + AluJb SINE Alu 140 330 -219 843 147 0 22 chr2 237970958 237971094 -15285489 + FLAM_C SINE Alu 1 133 0 885 172 28 0 chr2 237971094 237971167 -15285416 + AluJb SINE Alu 330 549 0 2193 114 0 0 chr2 237971608 237971914 -15284669 - AluSx SINE Alu -6 306 1 1566 185 30 7 chr2 237972081 237972199 -15284384 + AluJb SINE Alu 1 115 -197 207 0 0 0 chr2 237972199 237972222 -15284361 + (CAAAA)n Simple_repeat Simple_repeat 5 27 0 1566 185 30 7 chr2 237972222 237972400 -15284183 + AluJb SINE Alu 115 304 -8 2311 103 3 0 chr2 237972630 237972922 -15283661 + AluSx SINE Alu 1 293 -19 806 126 0 8 chr2 237973438 237973557 -15283026 + FLAM_C SINE Alu 1 118 -15 25 0 0 0 chr2 237973557 237973582 -15283001 + AT_rich Low_complexity Low_complexity 1 25 0 234 0 0 0 chr2 237973646 237973672 -15282911 + (TG)n Simple_repeat Simple_repeat 2 27 0 691 180 33 20 chr2 237973672 237973822 -15282761 - L1PB4 LINE L1 -15 6141 5990 1032 145 18 0 chr2 237973822 237973988 -15282595 + L1PB4 LINE L1 5794 5962 -194 7747 33 0 0 chr2 237975105 237976139 -15280444 + L1PA3 LINE L1 5121 6154 -1 25 31 0 0 chr2 237976141 237976173 -15280410 + AT_rich Low_complexity Low_complexity 1 32 0 7782 175 24 18 chr2 237976578 237977395 -15279188 + MSTA-int LTR MaLR 240 1071 -580 2268 159 65 7 chr2 237977395 237977798 -15278785 - MSTA LTR MaLR -2 426 1 7782 175 24 18 chr2 237977798 237978383 -15278200 + MSTA-int LTR MaLR 1071 1651 0 1047 125 119 0 chr2 237978383 237978551 -15278032 + MSTA LTR MaLR 1 188 -238 244 384 99 5 chr2 237978602 237978813 -15277770 + L3b LINE CR1 1292 1522 -61 2001 151 3 0 chr2 237978952 237979250 -15277333 - AluSx SINE Alu -13 299 1 1981 137 45 0 chr2 237979801 237980093 -15276490 - AluSx SINE Alu -7 305 1 186 150 0 0 chr2 237981167 237981207 -15275376 + (CAG)n Simple_repeat Simple_repeat 1 40 0 276 260 0 0 chr2 237981239 237981312 -15275271 + (CCA)n Simple_repeat Simple_repeat 3 75 0 270 296 102 0 chr2 237981845 237981943 -15274640 - MER103 DNA DNA 0 166 59 580 309 64 47 chr2 237982054 237982708 -15273875 + L1ME4a LINE L1 4381 5045 -1101 9765 155 3 9 chr2 237982726 237984727 -15271856 - L1PA14 LINE L1 -1 6160 4172 2067 114 4 0 chr2 237984727 237985008 -15271575 - AluSp SINE Alu -2 311 30 9765 155 3 9 chr2 237985008 237985472 -15271111 - L1PA14 LINE L1 -1989 4172 3707 2156 102 0 72 chr2 237985585 237985918 -15270665 + AluSq SINE Alu 1 309 -4 765 257 85 19 chr2 237985960 237986279 -15270304 + L1ME4a LINE L1 5271 5610 -552 1434 213 31 6 chr2 237986286 237986610 -15269973 - L1MC4 LINE L1 -960 7082 6751 180 111 0 0 chr2 237986821 237986848 -15269735 + (TG)n Simple_repeat Simple_repeat 2 28 0 976 184 25 10 chr2 237987545 237987746 -15268837 - MER3 DNA MER1_type -5 204 1 190 331 89 0 chr2 237988055 237988179 -15268404 - L2 LINE L2 -1228 2086 1952 423 221 178 24 chr2 237988329 237988542 -15268041 + L1ME4a LINE L1 5873 6118 -3 645 221 0 22 chr2 237988652 237988788 -15267795 - FLAM_A SINE Alu 0 133 1 2122 123 3 0 chr2 237988803 237989087 -15267496 - AluSx SINE Alu -27 285 1 253 306 18 0 chr2 237989232 237989343 -15267240 - L2 LINE L2 -1519 1795 1683 185 342 38 0 chr2 237989394 237989473 -15267110 + L2 LINE L2 3232 3313 0 2151 117 0 0 chr2 237990441 237990747 -15265836 - AluSx SINE Alu 0 306 1 239 233 23 0 chr2 237991020 237991063 -15265520 + Charlie1 DNA MER1_type 3 46 -2715 1927 183 39 5 chr2 237991065 237991481 -15265102 + Charlie1 DNA MER1_type 2332 2761 0 489 215 0 0 chr2 237992708 237992857 -15263726 + (TGG)n Simple_repeat Simple_repeat 3 151 0 282 266 28 0 chr2 237992897 237993006 -15263577 + (CTG)n Simple_repeat Simple_repeat 1 112 0 1597 190 3 7 chr2 237993802 237994092 -15262491 + AluJo SINE Alu 1 289 -23 1912 151 21 0 chr2 237994333 237994617 -15261966 + AluJb SINE Alu 1 290 -22 743 244 68 5 chr2 237994847 237995052 -15261531 - MER58A DNA MER1_type -6 218 1 270 316 6 4 chr2 237995081 237995252 -15261331 + MIR SINE MIR 2 247 -15 2575 48 0 6 chr2 237995533 237995844 -15260739 + AluY SINE Alu 2 310 -1 482 150 0 0 chr2 237995973 237996053 -15260530 + AluSg/x SINE Alu 213 292 -18 1028 113 0 0 chr2 237997338 237997471 -15259112 + AluY SINE Alu 1 133 -178 1532 93 9 5 chr2 237997481 237997695 -15258888 + AluY SINE Alu 6 220 -91 2080 133 3 0 chr2 237998077 237998378 -15258205 + AluSx SINE Alu 1 302 -10 287 258 0 0 chr2 237999041 237999107 -15257476 - L1MDa LINE L1 -4629 1911 1846 1091 105 0 0 chr2 237999114 237999267 -15257316 + L1PA16 LINE L1 6005 6157 -9 22 35 0 0 chr2 237999267 237999296 -15257287 + AT_rich Low_complexity Low_complexity 1 29 0 2300 90 3 7 chr2 237999298 237999609 -15256974 + AluSg SINE Alu 1 310 0 285 212 45 0 chr2 237999617 237999683 -15256900 - HAL1 LINE L1 -962 1545 1477 384 22 0 0 chr2 238000595 238000640 -15255943 + (TAAAA)n Simple_repeat Simple_repeat 1 45 0 1429 195 55 63 chr2 238000950 238001365 -15255218 - MER92A LTR ERV1 0 412 1 206 54 0 54 chr2 238001522 238001559 -15255024 + (TAAA)n Simple_repeat Simple_repeat 4 38 0 749 80 0 2 chr2 238001589 238001788 -15254795 + AluSx SINE Alu 39 274 -36 822 231 49 10 chr2 238001842 238002045 -15254538 + MER20 DNA MER1_type 2 212 -7 523 260 103 25 chr2 238002704 238002908 -15253675 + MER112 DNA MER1_type 1 220 -40 307 234 117 9 chr2 238002910 238003021 -15253562 - MER58C DNA MER1_type -19 196 74 1599 153 94 7 chr2 238003122 238003397 -15253186 - AluJb SINE Alu -13 299 1 2074 126 34 0 chr2 238003453 238003746 -15252837 - AluSg SINE Alu -7 303 1 1654 153 35 31 chr2 238003748 238004036 -15252547 - AluJo SINE Alu -20 292 4 1050 86 0 0 chr2 238004416 238004555 -15252028 + AluSc SINE Alu 165 303 -6 2313 92 0 3 chr2 238004685 238004980 -15251603 + AluSg SINE Alu 1 294 -16 23 0 0 0 chr2 238004992 238005015 -15251568 + AT_rich Low_complexity Low_complexity 1 23 0 2273 135 11 27 chr2 238005295 238005665 -15250918 + THE1B LTR MaLR 1 364 0 1669 128 48 24 chr2 238007745 238007996 -15248587 + AluJo SINE Alu 5 261 -51 711 223 147 0 chr2 238008003 238008200 -15248383 + MIR SINE MIR 18 243 -19 241 227 187 0 chr2 238008272 238008347 -15248236 + L2 LINE L2 3147 3235 -37 2128 141 0 0 chr2 238008358 238008662 -15247921 + AluSx SINE Alu 1 304 -8 202 365 64 13 chr2 238008874 238009030 -15247553 + MIR SINE MIR 20 183 -79 821 214 0 0 chr2 238009483 238009637 -15246946 + FRAM SINE Alu 1 154 -22 5833 168 37 111 chr2 238011698 238011871 -15244712 + MLT1C-int LTR MaLR 2 186 -1185 2241 104 0 0 chr2 238011871 238012150 -15244433 + AluSg SINE Alu 1 279 -31 5833 168 37 111 chr2 238012150 238012928 -15243655 + MLT1C-int LTR MaLR 186 807 -564 1680 114 0 0 chr2 238012928 238013155 -15243428 + AluSq SINE Alu 76 302 -11 5833 168 37 111 chr2 238013155 238013677 -15242906 + MLT1C-int LTR MaLR 807 1366 -5 1989 201 23 36 chr2 238013683 238014156 -15242427 + MLT1C LTR MaLR 1 467 0 2151 85 37 0 chr2 238014434 238014755 -15241828 - AluSg SINE Alu 0 331 1 2310 95 0 3 chr2 238015683 238015978 -15240605 + AluSg SINE Alu 1 294 -16 459 186 62 87 chr2 238016016 238016177 -15240406 - MER5A DNA MER1_type -32 157 1 2309 107 3 0 chr2 238016435 238016743 -15239840 - AluSq SINE Alu -4 309 1 257 300 120 0 chr2 238016919 238017019 -15239564 + MER103 DNA DNA 12 123 -43 1668 117 0 4 chr2 238017315 238017555 -15239028 + AluSg SINE Alu 62 300 -10 2167 125 3 6 chr2 238018337 238018650 -15237933 + AluSx SINE Alu 1 312 0 1751 106 8 0 chr2 238019392 238019629 -15236954 - AluSq SINE Alu -14 299 61 336 277 84 8 chr2 238021001 238021120 -15235463 + L2 LINE L2 3145 3272 0 771 181 15 0 chr2 238021665 238021798 -15234785 + AluJb SINE Alu 165 299 -13 233 249 63 95 chr2 238021850 238021891 -15234692 - MER112 DNA MER1_type -55 205 164 1891 100 16 0 chr2 238021891 238022142 -15234441 - AluSx SINE Alu -27 285 31 233 249 63 95 chr2 238022142 238022289 -15234294 - MER112 DNA MER1_type -96 164 23 805 182 0 0 chr2 238022313 238022445 -15234138 + AluJo SINE Alu 1 132 -170 1361 111 0 5 chr2 238022448 238022647 -15233936 - L1P4 LINE L1 -472 5696 5499 1440 110 59 4 chr2 238022647 238022881 -15233702 + L1PA11 LINE L1 5926 6174 0 1059 163 5 21 chr2 238022877 238023067 -15233516 + AluJo SINE Alu 118 304 -8 1962 132 0 4 chr2 238023483 238023756 -15232827 + AluSq SINE Alu 1 272 -41 1696 164 11 3 chr2 238024297 238024619 -15231964 + AluJb SINE Alu 1 324 0 2176 124 0 3 chr2 238024732 238025023 -15231560 - AluSx SINE Alu -22 290 1 505 91 0 0 chr2 238025446 238025512 -15231071 + AluJ/FLAM SINE Alu 1 66 -246 363 119 0 0 chr2 238025777 238025836 -15230747 - AluSp/q SINE Alu 0 303 245 1764 136 74 0 chr2 238025836 238026094 -15230489 - AluSq SINE Alu -33 280 4 180 231 0 0 chr2 238026155 238026194 -15230389 + L2 LINE L2 3224 3262 -10 329 105 0 18 chr2 238026706 238026763 -15229820 + L1PA16 LINE L1 6097 6152 -14 826 88 0 0 chr2 238026773 238026875 -15229708 + AluSp/q SINE Alu 180 281 -32 183 42 0 0 chr2 238026890 238026914 -15229669 + (CA)n Simple_repeat Simple_repeat 2 25 0 249 282 0 0 chr2 238026914 238026992 -15229591 + L1MC4 LINE L1 6624 6701 -1341 2095 112 35 0 chr2 238027703 238027989 -15228594 - AluSq SINE Alu -17 296 1 1967 152 3 3 chr2 238028805 238029101 -15227482 + AluSx SINE Alu 1 296 -16 2821 147 58 18 chr2 238029128 238029468 -15227115 - MLT2B1 LTR ERVL -2 518 150 578 227 183 95 chr2 238029468 238029703 -15226880 - MSTB LTR MaLR -4 422 138 2061 108 38 3 chr2 238029703 238029990 -15226593 - AluSx SINE Alu -15 297 1 578 227 183 95 chr2 238029990 238030142 -15226441 - MSTB LTR MaLR -288 138 1 2821 147 58 18 chr2 238030142 238030297 -15226286 - MLT2B1 LTR ERVL -370 150 3 216 0 0 0 chr2 238031043 238031067 -15225516 + (A)n Simple_repeat Simple_repeat 1 24 0 330 226 0 0 chr2 238031387 238031493 -15225090 + (TGG)n Simple_repeat Simple_repeat 3 108 0 186 150 0 0 chr2 238031531 238031571 -15225012 + (CTG)n Simple_repeat Simple_repeat 1 40 0 27 0 0 0 chr2 238032088 238032115 -15224468 + AT_rich Low_complexity Low_complexity 1 27 0 2441 84 10 7 chr2 238032359 238032667 -15223916 + AluSx SINE Alu 1 309 -3 2300 121 0 0 chr2 238033519 238033826 -15222757 + AluSx SINE Alu 1 307 -5 975 232 80 11 chr2 238034543 238034819 -15221764 - MER88 LTR ERVL -57 407 113 1822 136 46 21 chr2 238034862 238035163 -15221420 - AluSx SINE Alu 0 308 1 628 295 196 35 chr2 238035807 238036515 -15220068 - L1MEd LINE L1 -5294 825 4 1262 199 149 39 chr2 238036641 238037023 -15219560 - MSTB2 LTR MaLR -2 455 32 1468 116 169 8 chr2 238037216 238037486 -15219097 + AluSg1 SINE Alu 1 309 0 270 342 38 32 chr2 238038603 238038761 -15217822 - L3b LINE CR1 -316 1267 1109 193 312 52 0 chr2 238039895 238039972 -15216611 - MIR SINE MIR -72 190 110 407 178 112 95 chr2 238039981 238040150 -15216433 + L1MC5 LINE L1 7754 7925 -36 1102 237 59 3 chr2 238040863 238041150 -15215433 + L1ME1 LINE L1 5858 6160 -6 2258 119 0 3 chr2 238041744 238042046 -15214537 + AluSx SINE Alu 1 301 -11 2561 66 0 0 chr2 238043251 238043555 -15213028 + AluSc SINE Alu 1 304 -5 2007 114 19 44 chr2 238043841 238044157 -15212426 + AluSx SINE Alu 1 308 -4 1988 124 0 33 chr2 238045299 238045606 -15210977 + AluSx SINE Alu 1 297 -15 2049 117 3 3 chr2 238045608 238045930 -15210653 + AluSg SINE Alu 1 322 0 1230 165 0 0 chr2 238045930 238046154 -15210429 + L1P LINE L1 5110 5333 -813 1556 166 0 0 chr2 238046154 238046389 -15210194 + AluSx SINE Alu 1 235 -77 1501 268 70 42 chr2 238046395 238047226 -15209357 - L1M4 LINE L1 -2831 3315 2448 2477 84 7 3 chr2 238047226 238047535 -15209048 + AluSx SINE Alu 1 310 -2 1501 268 70 42 chr2 238047535 238047724 -15208859 - L1M4 LINE L1 -3698 2448 2266 1937 137 3 10 chr2 238048303 238048609 -15207974 + AluSx SINE Alu 1 304 -8 2057 122 3 35 chr2 238048973 238049285 -15207298 - MER1B DNA MER1_type -1 338 37 1117 106 0 0 chr2 238049517 238049658 -15206925 + AluSq/x SINE Alu 1 141 -171 285 66 33 98 chr2 238049658 238049719 -15206864 + FLAM SINE Alu 78 133 0 2006 129 0 7 chr2 238050239 238050573 -15206010 + AluSx SINE Alu 1 332 0 320 254 172 14 chr2 238050653 238050862 -15205721 + L1ME2 LINE L1 4957 5198 -948 2422 107 0 0 chr2 238050871 238051181 -15205402 + AluSx SINE Alu 1 310 -2 690 134 0 0 chr2 238051227 238051324 -15205259 + AluJ/FLAM SINE Alu 3 99 -213 1366 221 172 30 chr2 238051379 238052172 -15204411 + L1ME2 LINE L1 5188 6149 -15 1999 144 98 23 chr2 238052172 238052226 -15204357 + MSTC LTR MaLR 1 49 -379 1643 169 23 13 chr2 238052226 238052527 -15204056 + AluJo SINE Alu 1 304 -8 1999 144 98 23 chr2 238052527 238052868 -15203715 + MSTC LTR MaLR 49 426 -2 278 209 62 124 chr2 238052868 238052906 -15203677 + L1MA10 LINE L1 6295 6334 0 1007 225 89 31 chr2 238052915 238053240 -15203343 + L1ME2 LINE L1 5821 6164 0 180 0 0 0 chr2 238053807 238053827 -15202756 + (A)n Simple_repeat Simple_repeat 1 20 0 2084 129 0 28 chr2 238053906 238054223 -15202360 - AluSx SINE Alu -4 308 1 936 134 0 0 chr2 238054502 238054629 -15201954 - AluSq/x SINE Alu -186 127 1 1345 167 0 9 chr2 238054851 238055079 -15201504 + AluJb SINE Alu 81 306 -6 870 208 44 32 chr2 238055225 238055473 -15201110 + LTR37A LTR ERV1 89 339 -87 887 139 321 5 chr2 238055473 238055682 -15200901 + LTR29 LTR ERV1 1 275 -347 339 146 92 108 chr2 238055744 238055874 -15200709 + LTR49 LTR ERV1 385 512 -83 2209 107 10 7 chr2 238056097 238056405 -15200178 - AluSx SINE Alu -3 309 1 285 292 140 29 chr2 238057392 238057563 -15199020 - MIR SINE MIR -64 198 9 2059 76 79 21 chr2 238057632 238057956 -15198627 - AluSg SINE Alu 0 341 1 2428 92 0 6 chr2 238057960 238058275 -15198308 - AluSq SINE Alu 0 313 1 1771 172 10 22 chr2 238058302 238058616 -15197967 - AluJb SINE Alu -2 310 1 1833 160 6 19 chr2 238059357 238059670 -15196913 + AluJo SINE Alu 1 309 -3 499 209 48 121 chr2 238059672 238059878 -15196705 - L2 LINE L2 0 3313 3123 2053 108 61 0 chr2 238060091 238060368 -15196215 + AluSx SINE Alu 1 294 -18 2133 105 7 11 chr2 238060646 238060959 -15195624 - AluSx SINE Alu 0 312 1 228 350 20 0 chr2 238061028 238061128 -15195455 - HAL1b LINE L1 -54 1294 1193 2214 123 3 3 chr2 238061191 238061500 -15195083 - AluSx SINE Alu -3 309 1 975 200 128 21 chr2 238061601 238061836 -15194747 + AluJo SINE Alu 50 309 -3 409 96 14 14 chr2 238061841 238061914 -15194669 + (GGAA)n Simple_repeat Simple_repeat 3 75 0 2108 139 7 7 chr2 238061945 238062254 -15194329 + AluSx SINE Alu 1 309 -3 2065 143 0 3 chr2 238062269 238062570 -15194013 + AluSx SINE Alu 1 300 -12 381 211 144 0 chr2 238062859 238062949 -15193634 + FLAM_C SINE Alu 1 103 -30 1365 158 66 4 chr2 238063050 238063235 -15193348 - AluJb SINE Alu -70 242 39 1878 127 4 4 chr2 238063235 238063510 -15193073 + AluSx SINE Alu 29 303 -9 1365 158 66 4 chr2 238063510 238063552 -15193031 - AluJb SINE Alu -273 39 1 1259 181 33 7 chr2 238064149 238064420 -15192163 + L1MA4 LINE L1 6012 6289 -11 1577 208 68 47 chr2 238065081 238065232 -15191351 + L1 LINE L1 2719 2865 -3281 1987 143 14 0 chr2 238065232 238065539 -15191044 + AluSx SINE Alu 1 311 0 1577 208 68 47 chr2 238065539 238065916 -15190667 + L1 LINE L1 2865 3259 -2887 216 0 0 0 chr2 238065923 238065947 -15190636 + (A)n Simple_repeat Simple_repeat 1 24 0 528 250 245 0 chr2 238065973 238066189 -15190394 + L1 LINE L1 3762 4030 -2116 1605 101 0 0 chr2 238066253 238066461 -15190122 + AluY SINE Alu 5 212 -99 2514 58 3 13 chr2 238066571 238066896 -15189687 - AluY SINE Alu 0 322 1 1491 194 29 18 chr2 238066917 238067062 -15189521 - AluJo SINE Alu -30 282 131 2272 127 0 0 chr2 238067062 238067369 -15189214 - AluSx SINE Alu -5 307 1 1491 194 29 18 chr2 238067369 238067502 -15189081 - AluJo SINE Alu -181 131 1 884 104 0 0 chr2 238068387 238068502 -15188081 - AluSq SINE Alu -83 230 116 1037 126 7 20 chr2 238068522 238068673 -15187910 - AluSq/x SINE Alu -162 151 3 2352 103 0 0 chr2 238068677 238068978 -15187605 - AluSx SINE Alu -11 301 1 257 250 21 21 chr2 238069089 238069185 -15187398 + L2 LINE L2 2922 3017 -296 195 42 0 0 chr2 238070565 238070589 -15185994 + (TTTC)n Simple_repeat Simple_repeat 4 27 0 2062 100 3 31 chr2 238070590 238071063 -15185520 - AluSx SINE Alu 0 465 1 546 202 0 0 chr2 238071138 238071227 -15185356 - 5S rRNA rRNA -32 89 1 508 184 26 53 chr2 238071381 238071495 -15185088 - MER51A LTR ERV1 -297 337 227 591 101 0 0 chr2 238071541 238071620 -15184963 + AluSg/x SINE Alu 214 292 -18 1798 170 40 63 chr2 238071728 238071841 -15184742 - MLT1B LTR MaLR 0 390 276 3171 140 40 108 chr2 238071841 238072310 -15184273 + LTR8 LTR ERV1 1 404 -287 2132 110 4 0 chr2 238072310 238072617 -15183966 + AluSp SINE Alu 1 308 0 3171 140 40 108 chr2 238072617 238072887 -15183696 + LTR8 LTR ERV1 404 691 0 1798 170 40 63 chr2 238072887 238072993 -15183590 - MLT1B LTR MaLR -114 276 169 2280 95 0 0 chr2 238072993 238073456 -15183127 - AluSg SINE Alu 0 463 1 1798 170 40 63 chr2 238073456 238073633 -15182950 - MLT1B LTR MaLR -221 169 1 2040 120 0 27 chr2 238074160 238074461 -15182122 + AluSx SINE Alu 1 293 -19 29 0 0 0 chr2 238074461 238074490 -15182093 + AT_rich Low_complexity Low_complexity 1 29 0 204 67 0 0 chr2 238074607 238074637 -15181946 + (CA)n Simple_repeat Simple_repeat 2 31 0 3013 184 53 4 chr2 238075542 238076092 -15180491 + LTR22 LTR ERVK 1 577 -3 2528 60 0 3 chr2 238076552 238076854 -15179729 + AluY SINE Alu 1 301 -10 3544 137 6 15 chr2 238077254 238077786 -15178797 - MER1A DNA MER1_type 0 527 1 619 173 10 0 chr2 238078011 238078115 -15178468 + AluSg SINE Alu 2 106 -204 2029 62 0 0 chr2 238078215 238078456 -15178127 - AluY SINE Alu -70 241 1 355 249 54 60 chr2 238078527 238078712 -15177871 - HAL1 LINE L1 -312 2195 2012 2125 133 0 13 chr2 238078932 238079241 -15177342 - AluSx SINE Alu -7 305 1 216 241 0 0 chr2 238079862 238079941 -15176642 + (TGG)n Simple_repeat Simple_repeat 3 81 0 186 150 0 0 chr2 238079979 238080019 -15176564 + (CTG)n Simple_repeat Simple_repeat 1 40 0 2257 109 20 0 chr2 238080648 238080951 -15175632 + AluSg SINE Alu 1 309 -1 1973 153 10 7 chr2 238080968 238081275 -15175308 + AluSg SINE Alu 3 310 0 2265 115 3 0 chr2 238081709 238082004 -15174579 - AluSq SINE Alu -17 296 1 486 204 39 0 chr2 238082145 238082248 -15174335 + MER21B LTR ERV1 142 248 -615 1616 118 42 0 chr2 238082504 238082741 -15173842 - AluSx SINE Alu -24 288 42 1024 145 0 0 chr2 238082741 238082886 -15173697 - AluSq/x SINE Alu -168 145 1 437 167 24 0 chr2 238082904 238082984 -15173599 - MER20 DNA MER1_type 0 219 138 2000 122 34 3 chr2 238082984 238083279 -15173304 - MER4C LTR ERV1 0 465 162 2145 115 21 0 chr2 238083279 238083567 -15173016 + AluSx SINE Alu 1 294 -18 363 231 66 0 chr2 238083567 238083658 -15172925 - MER21B LTR ERV1 -669 194 98 412 149 0 15 chr2 238083711 238083778 -15172805 - AluS SINE Alu -241 68 3 350 308 11 0 chr2 238083778 238083869 -15172714 - MER21B LTR ERV1 -761 102 11 187 167 48 0 chr2 238083923 238083965 -15172618 - L2 LINE L2 -461 2852 2809 262 259 52 17 chr2 238084289 238084405 -15172178 + MIR SINE MIR 111 230 -32 2093 62 99 0 chr2 238084475 238084747 -15171836 - AluY SINE Alu -7 304 6 2269 119 0 0 chr2 238084980 238085282 -15171301 - AluSq SINE Alu -11 302 1 23 0 0 0 chr2 238085530 238085553 -15171030 + AT_rich Low_complexity Low_complexity 1 23 0 2229 117 3 0 chr2 238085564 238085862 -15170721 - AluSx SINE Alu -13 299 1 632 211 8 16 chr2 238085870 238085993 -15170590 - FLAM_A SINE Alu -11 122 1 388 213 43 0 chr2 238085995 238086089 -15170494 - L1ME LINE L1 -340 5781 5684 675 276 59 17 chr2 238086761 238087000 -15169583 - MIR SINE MIR -1 261 13 250 317 65 0 chr2 238087257 238087380 -15169203 - L2 LINE L2 -448 2866 2736 1459 143 49 77 chr2 238087394 238087681 -15168902 + AluJo SINE Alu 1 279 -33 2364 82 0 0 chr2 238087699 238087980 -15168603 + AluSx SINE Alu 1 281 -31 494 82 12 0 chr2 238087981 238088066 -15168517 + (TA)n Simple_repeat Simple_repeat 2 87 0 311 232 152 7 chr2 238088402 238088540 -15168043 + MER20 DNA MER1_type 5 162 -57 479 114 0 0 chr2 238089011 238089081 -15167502 + Alu SINE Alu 225 294 -17 1482 131 36 14 chr2 238089148 238089423 -15167160 + L1MA8 LINE L1 6010 6290 -1 2152 129 0 0 chr2 238089529 238089816 -15166767 - AluSx SINE Alu -25 287 1 2320 109 0 0 chr2 238090051 238090354 -15166229 - AluSx SINE Alu -9 303 1 895 188 251 6 chr2 238090511 238090838 -15165745 + LTR29 LTR ERV1 1 246 -376 4777 157 24 48 chr2 238090838 238091831 -15164752 - LTR5 LTR ERVK 0 969 1 895 188 251 6 chr2 238091831 238091915 -15164668 + LTR29 LTR ERV1 246 545 -77 1491 141 4 21 chr2 238091939 238092173 -15164410 - AluSx SINE Alu -53 259 30 395 204 32 21 chr2 238092173 238092266 -15164317 + MER39B LTR ERV1 560 653 0 186 150 0 0 chr2 238093221 238093261 -15163322 + (CAG)n Simple_repeat Simple_repeat 1 40 0 234 237 0 0 chr2 238093299 238093375 -15163208 + (CCA)n Simple_repeat Simple_repeat 3 78 0 1038 124 20 148 chr2 238094178 238094235 -15162348 - L1MC1 LINE L1 -1 6332 6269 2231 104 0 3 chr2 238094235 238094524 -15162059 + AluSx SINE Alu 1 288 -24 1038 124 20 148 chr2 238094524 238094716 -15161867 - L1MC1 LINE L1 -64 6269 6115 1661 141 108 0 chr2 238094765 238095034 -15161549 + AluSx SINE Alu 2 299 -13 2109 124 10 0 chr2 238095511 238095810 -15160773 - AluSx SINE Alu -10 302 1 1717 196 17 20 chr2 238096542 238096895 -15159688 + MER89 LTR ERV1 208 559 0 336 284 164 0 chr2 238096896 238097030 -15159553 + L1ME4a LINE L1 5620 5775 -387 1703 184 24 0 chr2 238097096 238097390 -15159193 - AluJo SINE Alu -11 301 1 13369 49 3 1 chr2 238097612 238100008 -15156575 + L1PA5 LINE L1 3748 6150 -4 384 339 8 28 chr2 238100009 238100260 -15156323 - L2 LINE L2 -135 3178 2933 672 265 145 11 chr2 238100351 238100702 -15155881 - L2 LINE L2 -514 2800 2403 898 166 7 7 chr2 238100717 238100868 -15155715 + AluJb SINE Alu 134 284 -28 727 180 108 108 chr2 238102050 238102345 -15154238 - L1MC5 LINE L1 -909 7052 6758 1807 183 7 7 chr2 238102345 238102651 -15153932 - AluSx SINE Alu -6 306 1 2041 142 3 19 chr2 238102671 238102988 -15153595 - AluSx SINE Alu 0 312 1 1958 92 5 173 chr2 238103221 238103632 -15152951 + LTR14B LTR ERVK 1 606 -2 412 274 44 0 chr2 238103835 238103948 -15152635 + L1MD2 LINE L1 6223 6340 -19 1795 157 0 20 chr2 238103982 238104282 -15152301 + AluJo SINE Alu 12 305 -7 291 245 39 45 chr2 238104411 238104566 -15152017 + L1ME4a LINE L1 5782 5935 -186 1366 172 165 4 chr2 238104577 238104838 -15151745 + AluJb SINE Alu 3 305 -7 2037 115 0 85 chr2 238104877 238105217 -15151366 + AluSq SINE Alu 3 313 0 1011 265 151 35 chr2 238105217 238105727 -15150856 + L1MC4 LINE L1 7315 7883 -159 752 185 0 30 chr2 238105746 238105881 -15150702 + FLAM_C SINE Alu 2 132 -11 337 252 34 20 chr2 238105882 238106029 -15150554 + L1MC4 LINE L1 7894 8042 0 723 159 0 0 chr2 238106074 238106181 -15150402 + FLAM_C SINE Alu 12 118 -25 356 196 147 21 chr2 238106192 238106335 -15150248 + L1ME4a LINE L1 5961 6121 0 1964 147 0 11 chr2 238106673 238106984 -15149599 + AluSx SINE Alu 2 309 0 2047 148 0 0 chr2 238107367 238107658 -15148925 + AluSx SINE Alu 1 291 -21 884 208 6 6 chr2 238107712 238107890 -15148693 + FRAM SINE Alu 1 176 0 980 129 0 0 chr2 238108791 238108923 -15147660 - AluSg/x SINE Alu -15 295 164 2232 106 7 0 chr2 238108928 238109221 -15147362 - AluSp SINE Alu -18 295 1 241 281 0 16 chr2 238109403 238109467 -15147116 - L2 LINE L2 0 3313 3251 294 231 0 0 chr2 238109817 238109908 -15146675 + (TGG)n Simple_repeat Simple_repeat 3 93 0 285 226 32 0 chr2 238109946 238110039 -15146544 + (CTG)n Simple_repeat Simple_repeat 2 97 0 4476 131 7 21 chr2 238110140 238110850 -15145733 + MER50 LTR ERV1 12 711 -23 2076 133 3 7 chr2 238111638 238111946 -15144637 - AluSq SINE Alu -6 307 1 437 265 29 41 chr2 238111985 238112155 -15144428 + MIR SINE MIR 20 187 -75 2047 133 21 0 chr2 238112786 238113072 -15143511 - AluSx SINE Alu -20 292 1 2602 60 0 0 chr2 238113802 238114119 -15142464 + L1PA6 LINE L1 5714 6030 -124 216 0 0 0 chr2 238114830 238114854 -15141729 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 353 272 67 30 chr2 238115421 238115573 -15141010 + MIR SINE MIR 7 161 -63 228 317 67 42 chr2 238115901 238116021 -15140562 + MIR3 SINE MIR 15 137 -71 917 128 0 8 chr2 238116128 238116261 -15140322 - AluJo SINE Alu -178 134 3 225 0 0 0 chr2 238117999 238118024 -15138559 + (T)n Simple_repeat Simple_repeat 1 25 0 230 219 16 0 chr2 238118481 238118545 -15138038 + CT-rich Low_complexity Low_complexity 2 66 0 462 241 25 137 chr2 238118552 238118793 -15137790 + MIR SINE MIR 48 261 -1 276 330 87 6 chr2 238118945 238119118 -15137465 - MIR SINE MIR -41 221 35 234 91 0 0 chr2 238119462 238119495 -15137088 + (TTCTCC)n Simple_repeat Simple_repeat 3 35 0 2122 127 10 3 chr2 238119500 238119800 -15136783 - AluSx SINE Alu -10 302 1 499 60 0 0 chr2 238120262 238120329 -15136254 + Alu SINE Alu 238 304 -8 2589 99 31 0 chr2 238120742 238121095 -15135488 + THE1B LTR MaLR 1 364 0 252 218 149 34 chr2 238121264 238121610 -15134973 + LTR16A1 LTR ERVL 96 455 -2 1670 207 41 55 chr2 238121758 238122174 -15134409 - LTR2 LTR ERV1 0 449 40 1426 102 15 0 chr2 238122466 238122662 -15133921 - AluSp SINE Alu -2 311 113 2371 97 10 0 chr2 238122860 238123159 -15133424 + AluSx SINE Alu 1 302 -10 24 0 0 0 chr2 238123444 238123468 -15133115 + AT_rich Low_complexity Low_complexity 1 24 0 1592 185 33 4 chr2 238123468 238123744 -15132839 - AluJb SINE Alu -24 288 5 4573 184 21 27 chr2 238124056 238124405 -15132178 - L1MB8 LINE L1 0 6178 5829 2211 126 0 0 chr2 238124405 238124699 -15131884 - AluSx SINE Alu -14 298 5 4573 184 21 27 chr2 238124699 238125954 -15130629 - L1MB8 LINE L1 -349 5829 4581 1706 176 10 6 chr2 238125955 238126267 -15130316 + AluSq SINE Alu 1 313 0 1822 235 158 0 chr2 238126275 238126806 -15129777 - L1MB8 LINE L1 -2029 4117 3503 1848 162 0 13 chr2 238126922 238127225 -15129358 - AluJo SINE Alu -2 310 12 1158 115 0 36 chr2 238127244 238127409 -15129174 - AluSg/x SINE Alu -14 298 140 1642 140 46 35 chr2 238127421 238127706 -15128877 - AluSq SINE Alu -25 288 1 2095 119 0 3 chr2 238128505 238128790 -15127793 + AluSq SINE Alu 12 295 -18 1164 260 57 52 chr2 238129007 238129106 -15127477 + L1ME3A LINE L1 5496 5593 -577 1856 144 7 24 chr2 238129106 238129398 -15127185 - AluJo SINE Alu -25 287 1 1164 260 57 52 chr2 238129398 238129755 -15126828 + L1ME3A LINE L1 5593 5954 -216 2708 26 3 0 chr2 238130396 238130704 -15125879 + AluY SINE Alu 1 309 -2 3309 127 24 44 chr2 238132062 238132683 -15123900 + MER4B LTR ERV1 1 779 0 682 196 10 85 chr2 238133020 238133219 -15123364 - MER53 DNA DNA -3 186 3 540 153 41 0 chr2 238133321 238133419 -15123164 + MLT1D LTR MaLR 404 505 0 359 0 43 0 chr2 238133702 238133748 -15122835 + (TCCA)n Simple_repeat Simple_repeat 3 50 0 2185 104 0 3 chr2 238133923 238134233 -15122350 + AluSc SINE Alu 1 309 0 315 224 0 0 chr2 238135356 238135423 -15121160 - LTR28 LTR ERV1 -195 825 759 1569 219 188 60 chr2 238135432 238135979 -15120604 - LTR28 LTR ERV1 -400 620 4 303 309 103 61 chr2 238136127 238136292 -15120291 - MER5B DNA MER1_type 0 178 7 246 358 51 0 chr2 238136457 238136594 -15119989 - MIR SINE MIR -1 261 118 291 304 198 27 chr2 238137003 238137371 -15119212 + L3 LINE CR1 955 1385 -192 1884 162 3 0 chr2 238137690 238137987 -15118596 - AluJb SINE Alu -14 298 1 289 320 122 33 chr2 238139130 238139311 -15117272 - MIR SINE MIR -32 230 34 977 113 0 0 chr2 238139333 238139466 -15117117 - AluSq/x SINE Alu -180 133 1 1699 153 54 80 chr2 238140001 238140105 -15116478 - MER61A LTR ERV1 0 343 238 2197 112 13 7 chr2 238140105 238140408 -15116175 + AluSx SINE Alu 1 305 -7 1699 153 54 80 chr2 238140408 238140655 -15115928 - MER61A LTR ERV1 -105 238 1 1354 274 119 74 chr2 238140699 238141407 -15115176 - ERVL LTR ERVL -361 5403 4729 2034 131 3 3 chr2 238141407 238141704 -15114879 - AluSx SINE Alu -15 297 1 1354 274 119 74 chr2 238141704 238141895 -15114688 - ERVL LTR ERVL -1035 4729 4548 2380 86 0 0 chr2 238141895 238142187 -15114396 - AluY SINE Alu -19 292 1 1354 274 119 74 chr2 238142187 238142533 -15114050 - ERVL LTR ERVL -1216 4548 4100 219 36 0 0 chr2 238142539 238142567 -15114016 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1735 145 42 0 chr2 238142584 238142846 -15113737 - AluSx SINE Alu -39 273 1 525 245 37 0 chr2 238144245 238144396 -15112187 + MIR SINE MIR 106 261 -1 195 42 0 0 chr2 238144439 238144463 -15112120 + (TC)n Simple_repeat Simple_repeat 1 24 0 2035 111 0 11 chr2 238144463 238144743 -15111840 - AluSx SINE Alu -35 277 1 336 127 0 0 chr2 238144829 238144884 -15111699 + (TTCC)n Simple_repeat Simple_repeat 3 57 0 31 44 0 0 chr2 238144901 238144946 -15111637 + AT_rich Low_complexity Low_complexity 1 45 0 1269 57 4 161 chr2 238144951 238145181 -15111402 - L1MA1 LINE L1 -4 6298 6105 411 259 148 35 chr2 238145442 238145626 -15110957 - MIR SINE MIR -51 211 10 252 343 30 15 chr2 238145881 238146015 -15110568 - MIR3 SINE MIR -4 204 69 2265 89 17 0 chr2 238146356 238146649 -15109934 + AluSp SINE Alu 1 298 -15 1637 182 3 31 chr2 238146729 238147048 -15109535 - AluJb SINE Alu -2 310 1 2123 138 0 3 chr2 238147066 238147378 -15109205 - AluSx SINE Alu -1 311 1 943 186 0 6 chr2 238147511 238147667 -15108916 + FRAM SINE Alu 2 156 -20 21 0 0 0 chr2 238147670 238147691 -15108892 + AT_rich Low_complexity Low_complexity 1 21 0 560 256 90 62 chr2 238147691 238148113 -15108470 - L1ME4a LINE L1 -37 6084 5651 587 238 109 52 chr2 238148955 238148984 -15107599 + L1ME LINE L1 5563 5589 -532 2135 112 7 0 chr2 238148984 238149271 -15107312 - AluSx SINE Alu -23 289 1 587 238 109 52 chr2 238149271 238149489 -15107094 + L1ME LINE L1 5589 5824 -297 22 0 0 0 chr2 238149691 238149713 -15106870 + AT_rich Low_complexity Low_complexity 1 22 0 2391 93 0 3 chr2 238150141 238150453 -15106130 + AluSx SINE Alu 1 311 -1 22 0 0 0 chr2 238150501 238150523 -15106060 + AT_rich Low_complexity Low_complexity 1 22 0 1918 129 43 30 chr2 238150659 238150962 -15105621 - AluSx SINE Alu -5 307 1 290 348 32 19 chr2 238152304 238152462 -15104121 + L2 LINE L2 2305 2464 -850 428 340 25 15 chr2 238152569 238152766 -15103817 + L2 LINE L2 2305 2503 -811 2067 139 3 0 chr2 238152789 238153091 -15103492 - AluSx SINE Alu -9 303 1 567 259 75 54 chr2 238153094 238153333 -15103250 + L2 LINE L2 2949 3192 -121 243 125 0 0 chr2 238153333 238153373 -15103210 + (TC)n Simple_repeat Simple_repeat 2 41 0 1438 116 19 5 chr2 238153505 238153721 -15102862 + AluSg/x SINE Alu 83 301 -9 693 220 0 0 chr2 238154103 238154235 -15102348 + FLAM_C SINE Alu 1 132 -1 1750 181 17 0 chr2 238154525 238154823 -15101760 + AluSx SINE Alu 1 303 -9 197 77 51 0 chr2 238154931 238154970 -15101613 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 215 30 0 30 chr2 238155961 238155994 -15100589 + (TTTC)n Simple_repeat Simple_repeat 3 34 0 2071 97 3 17 chr2 238155999 238156297 -15100286 - AluY SINE Alu -17 294 1 582 241 238 10 chr2 238156306 238156606 -15099977 - L1M4 LINE L1 -2061 4085 3739 2860 223 62 63 chr2 238156656 238157006 -15099577 - L1M4 LINE L1 -2909 3237 2888 1964 143 14 0 chr2 238157006 238157313 -15099270 - AluSx SINE Alu 0 311 1 2860 223 62 63 chr2 238157313 238157683 -15098900 - L1M4 LINE L1 -3258 2888 2515 1724 90 25 16 chr2 238157683 238157927 -15098656 + AluSq SINE Alu 66 311 -2 2860 223 62 63 chr2 238157927 238158187 -15098396 - L1M4 LINE L1 -3631 2515 2256 1755 173 3 33 chr2 238159796 238160102 -15096481 - AluJb SINE Alu -15 297 1 319 276 48 29 chr2 238162040 238162145 -15094438 + MIR SINE MIR 30 136 -72 277 280 13 0 chr2 238163819 238163894 -15092689 + MER116 DNA Mariner 5 80 0 629 240 18 9 chr2 238163945 238164123 -15092460 + MER20B DNA MER1_type 34 214 -5 207 0 0 0 chr2 238164376 238164399 -15092184 + (A)n Simple_repeat Simple_repeat 1 23 0 295 130 0 0 chr2 238164958 238165004 -15091579 - L1ME3 LINE L1 -1 6161 6116 225 0 0 0 chr2 238165004 238165029 -15091554 + (T)n Simple_repeat Simple_repeat 1 25 0 2007 121 0 17 chr2 238165131 238165421 -15091162 - AluSg SINE Alu -25 285 1 715 295 28 26 chr2 238165422 238165739 -15090844 - L1ME3 LINE L1 -32 6130 5811 311 276 60 22 chr2 238166105 238166239 -15090344 - L2 LINE L2 -1353 1961 1823 227 79 26 0 chr2 238166327 238166365 -15090218 + (GA)n Simple_repeat Simple_repeat 2 40 0 870 109 8 0 chr2 238167178 238167297 -15089286 - FLAM_C SINE Alu -23 120 1 847 209 53 145 chr2 238167322 238167507 -15089076 - L1MC5 LINE L1 -63 7898 7698 435 38 0 0 chr2 238167507 238167560 -15089023 + (TA)n Simple_repeat Simple_repeat 1 53 0 847 209 53 145 chr2 238167560 238167954 -15088629 - L1MC5 LINE L1 -263 7698 7372 399 316 74 48 chr2 238168096 238168365 -15088218 - L2 LINE L2 -2703 611 336 353 297 56 14 chr2 238168628 238168757 -15087826 - MIR SINE MIR -74 134 21 372 306 80 40 chr2 238169074 238169273 -15087310 - L2 LINE L2 0 3313 3107 265 196 20 0 chr2 238169419 238169511 -15087072 - AluJ/FRAM SINE Alu 0 324 232 203 381 22 7 chr2 238169518 238169657 -15086926 + L2 LINE L2 2067 2207 -1107 2105 125 0 0 chr2 238169662 238169963 -15086620 - AluSx SINE Alu 0 301 1 2170 111 3 3 chr2 238170801 238171099 -15085484 - AluSx SINE Alu -14 298 1 245 247 12 0 chr2 238171866 238171947 -15084636 + CT-rich Low_complexity Low_complexity 4 85 0 215 140 20 0 chr2 238172016 238172066 -15084517 + (TCTG)n Simple_repeat Simple_repeat 2 52 0 495 318 10 20 chr2 238172869 238173070 -15083513 + L1ME LINE L1 5509 5707 -414 2214 102 0 0 chr2 238173070 238173400 -15083183 + AluSq SINE Alu 1 330 0 261 237 204 11 chr2 238173753 238173846 -15082737 - MER5A DNA MER1_type -43 146 36 243 327 100 0 chr2 238174304 238174414 -15082169 + L2 LINE L2 3191 3311 -2 477 50 0 0 chr2 238175364 238175424 -15081159 + (TTCC)n Simple_repeat Simple_repeat 1 60 0 2083 125 13 0 chr2 238175424 238175729 -15080854 - AluSx SINE Alu -3 309 1 183 326 11 34 chr2 238176298 238176387 -15080196 - MER5A DNA MER1_type -84 105 19 2041 130 3 0 chr2 238176420 238176735 -15079848 - AluSq SINE Alu 0 316 1 228 308 0 39 chr2 238176785 238176889 -15079694 - LTR33A LTR ERVL -8 515 416 2263 104 0 3 chr2 238176986 238177283 -15079300 + AluSg SINE Alu 1 296 -14 1719 188 0 16 chr2 238177533 238177670 -15078913 + AluJo SINE Alu 1 139 -173 2163 130 0 7 chr2 238177670 238177971 -15078612 + AluJb SINE Alu 1 299 -13 1719 188 0 16 chr2 238177971 238178137 -15078446 + AluJo SINE Alu 139 299 -13 2379 89 0 10 chr2 238178368 238178672 -15077911 + AluSx SINE Alu 1 301 -11 26 0 0 0 chr2 238178929 238178955 -15077628 + AT_rich Low_complexity Low_complexity 1 26 0 275 283 88 47 chr2 238179051 238179390 -15077193 - L1MC4 LINE L1 -1 8041 7689 207 108 27 0 chr2 238179431 238179468 -15077115 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 948 122 0 0 chr2 238179472 238179603 -15076980 - AluJo SINE Alu -176 136 6 1835 153 7 3 chr2 238179687 238179981 -15076602 - AluSx SINE Alu -17 295 1 905 164 0 8 chr2 238180008 238180142 -15076441 + FLAM_C SINE Alu 1 133 0 247 269 146 0 chr2 238180154 238180284 -15076299 - L1MC5 LINE L1 -501 7460 7312 790 284 47 25 chr2 238180331 238180648 -15075935 - L1MC4 LINE L1 -621 7421 7098 385 136 0 0 chr2 238180835 238180894 -15075689 + L1P LINE L1 4960 5018 -1128 225 132 0 0 chr2 238180894 238180932 -15075651 + (TTAGGG)n Simple_repeat Simple_repeat 5 42 0 923 276 67 22 chr2 238180957 238181269 -15075314 - L1MC4a LINE L1 -941 6867 6542 21318 104 7 29 chr2 238181295 238185468 -15071115 - L1P3 LINE L1 -2290 4171 1 2557 201 46 87 chr2 238185860 238186099 -15070484 - L1ME2 LINE L1 -18 6146 5899 2922 152 7 5 chr2 238186099 238186526 -15070057 + MSTA LTR MaLR 1 428 0 2557 201 46 87 chr2 238186526 238186763 -15069820 - L1ME2 LINE L1 -265 5899 5710 6109 137 11 8 chr2 238186763 238187663 -15068920 - MER4D LTR ERV1 0 903 1 2557 201 46 87 chr2 238187663 238187940 -15068643 - L1ME2 LINE L1 -454 5710 5423 2200 176 90 156 chr2 238187961 238188560 -15068023 + LTR8 LTR ERV1 1 539 -188 1928 156 0 3 chr2 238188560 238188862 -15067721 + AluJb SINE Alu 7 307 -5 2200 176 90 156 chr2 238188862 238189040 -15067543 + LTR8 LTR ERV1 539 727 0 348 288 171 18 chr2 238189103 238189273 -15067310 - MIR3 SINE MIR -1 207 12 234 0 0 0 chr2 238189401 238189427 -15067156 + (TA)n Simple_repeat Simple_repeat 2 27 0 189 295 77 13 chr2 238191390 238191468 -15065115 - MIR SINE MIR -68 140 58 539 303 71 34 chr2 238191549 238191846 -15064737 - L3 LINE CR1 -1 1576 1269 458 260 52 32 chr2 238192343 238192497 -15064086 - MIR SINE MIR -81 181 25 2106 128 7 0 chr2 238192624 238192929 -15063654 - AluSq SINE Alu -5 308 2 204 265 20 0 chr2 238193016 238193065 -15063518 + L2 LINE L2 3217 3266 -6 209 156 0 22 chr2 238193507 238193552 -15063031 + CT-rich Low_complexity Low_complexity 3 46 0 * 269 123 0 18 chr2 238193551 238193608 -15062975 + (TA)n Simple_repeat Simple_repeat 1 56 0 1735 156 4 0 chr2 238193608 238193883 -15062700 - AluJb SINE Alu -26 286 11 862 257 0 16 chr2 238194219 238194406 -15062177 - MER5A DNA MER1_type 0 189 6 627 161 54 0 chr2 238194514 238194626 -15061957 - MLT1A1 LTR MaLR 0 365 248 1591 213 81 20 chr2 238194626 238195010 -15061573 - L1MC4 LINE L1 -181 7861 7443 2262 99 3 13 chr2 238195010 238195322 -15061261 - AluSc SINE Alu 0 309 1 1591 213 81 20 chr2 238195322 238195392 -15061191 - L1MC4 LINE L1 -599 7443 7379 1179 186 20 0 chr2 238195393 238195597 -15060986 - AluJo SINE Alu -100 212 5 473 242 46 64 chr2 238195813 238196032 -15060551 - MER113 DNA MER1_type? -3 518 304 236 149 21 0 chr2 238196033 238196080 -15060503 + CT-rich Low_complexity Low_complexity 3 50 0 189 385 33 8 chr2 238197853 238197975 -15058608 - MIR SINE MIR -61 147 23 187 207 17 103 chr2 238197933 238197991 -15058592 + MER5A DNA MER1_type 60 112 -77 * 264 59 0 0 chr2 238197992 238198026 -15058557 + (A)n Simple_repeat Simple_repeat 1 34 0 258 279 55 147 chr2 238198206 238198662 -15057921 + L2 LINE L2 2283 2696 -618 367 288 156 49 chr2 238198818 238199165 -15057418 + L2 LINE L2 2930 3313 0 29 28 0 0 chr2 238199385 238199421 -15057162 + AT_rich Low_complexity Low_complexity 1 36 0 1835 149 44 0 chr2 238199421 238199696 -15056887 - AluSx SINE Alu -25 287 1 2303 272 205 11 chr2 238200026 238200456 -15056127 + L2 LINE L2 1730 2076 -1237 1760 81 0 9 chr2 238200456 238200720 -15055863 + AluSg/x SINE Alu 65 326 0 2303 272 205 11 chr2 238200720 238201623 -15054960 + L2 LINE L2 2076 3313 0 2370 72 0 19 chr2 238201816 238202123 -15054460 - AluY SINE Alu -10 301 1 1657 159 94 0 chr2 238202977 238203254 -15053329 - AluSx SINE Alu -7 305 3 2152 128 17 41 chr2 238203354 238203699 -15052884 - MER1B DNA MER1_type 0 337 1 1618 209 0 7 chr2 238204245 238204547 -15052036 + AluJo SINE Alu 3 302 -10 29 0 0 0 chr2 238204594 238204623 -15051960 + AT_rich Low_complexity Low_complexity 1 29 0 1833 135 11 4 chr2 238204623 238204889 -15051694 - AluSq SINE Alu -45 268 1 404 305 72 50 chr2 238204999 238205261 -15051322 - L1MC/D LINE L1 -2267 5541 5274 475 311 75 20 chr2 238205311 238205604 -15050979 - L1MC/D LINE L1 -961 5185 4877 376 331 113 20 chr2 238206654 238207007 -15049576 - L2 LINE L2 -1028 2286 1901 2250 119 3 0 chr2 238207545 238207856 -15048727 - AluSx SINE Alu 0 312 1 5633 204 54 33 chr2 238207987 238208423 -15048160 + Charlie1a DNA MER1_type 1 427 -2334 2240 109 34 60 chr2 238208423 238208808 -15047775 + THE1C LTR MaLR 1 375 0 5633 204 54 33 chr2 238208808 238209790 -15046793 + Charlie1a DNA MER1_type 427 1448 -7 2080 232 123 15 chr2 238209838 238210455 -15046128 - L1MDb LINE L1 -5056 1487 804 630 228 44 39 chr2 238210826 238211006 -15045577 - L1MDb LINE L1 -6326 214 34 34 24 0 0 chr2 238211029 238211070 -15045513 + AT_rich Low_complexity Low_complexity 1 41 0 1400 179 103 3 chr2 238211458 238211760 -15044823 - L1MC3 LINE L1 -6 7779 7448 867 98 0 0 chr2 238211765 238211888 -15044695 - AluSp/q SINE Alu 0 313 191 2052 153 0 0 chr2 238212138 238212439 -15044144 + AluSx SINE Alu 1 301 -11 772 164 0 41 chr2 238212468 238212617 -15043966 + FLAM_C SINE Alu 1 144 0 208 178 89 0 chr2 238214030 238214075 -15042508 + L2 LINE L2 3214 3262 -10 376 291 78 0 chr2 238214805 238214946 -15041637 + MIR SINE MIR 105 256 -6 1093 208 219 119 chr2 238215013 238215373 -15041210 - MLT1A1 LTR MaLR 0 396 1 385 263 20 0 chr2 238216538 238216637 -15039946 + MER94 DNA DNA 15 115 -19 185 347 0 0 chr2 238216670 238216719 -15039864 - L2 LINE L2 -4 3309 3261 2202 159 57 55 chr2 238217606 238217941 -15038642 - MLT1C LTR MaLR -6 461 123 2359 88 0 3 chr2 238217941 238218237 -15038346 - AluSp SINE Alu -18 295 1 2202 159 57 55 chr2 238218237 238218359 -15038224 - MLT1C LTR MaLR -344 123 3 2047 96 7 14 chr2 238218791 238219073 -15037510 + AluSg SINE Alu 1 280 -30 1982 118 0 21 chr2 238219187 238219500 -15037083 + AluSx SINE Alu 1 307 0 230 245 0 0 chr2 238219726 238219775 -15036808 + (TTCA)n Simple_repeat Simple_repeat 4 52 0 307 290 135 26 chr2 238219812 238219923 -15036660 - MIR SINE MIR -13 249 151 2216 87 3 48 chr2 238219923 238220232 -15036351 + AluSx SINE Alu 1 295 -17 307 290 135 26 chr2 238220232 238220313 -15036270 - MIR SINE MIR -111 151 36 226 278 0 22 chr2 238222976 238223066 -15033517 + L1MC4 LINE L1 6615 6702 -1340 * 252 242 0 63 chr2 238223001 238223096 -15033487 - L1MC4 LINE L1 -1339 6703 6615 227 308 0 0 chr2 238223080 238223158 -15033425 + L1MC4 LINE L1 6615 6692 -1350 * 439 182 13 0 chr2 238223186 238223263 -15033320 - MLT1B LTR MaLR -312 78 1 225 211 0 0 chr2 238223864 238223921 -15032662 + (CTATA)n Simple_repeat Simple_repeat 1 57 0 1052 80 0 0 chr2 238224024 238224161 -15032422 - AluSg/x SINE Alu -4 308 172 411 73 0 0 chr2 238225665 238225673 -15030910 + (TCTG)n Simple_repeat Simple_repeat 1 63 0 411 73 0 0 chr2 238225673 238225728 -15030855 + (TCTG)n Simple_repeat Simple_repeat 2 56 0 222 37 0 0 chr2 238225788 238225815 -15030768 + (TC)n Simple_repeat Simple_repeat 2 28 0 645 123 0 0 chr2 238228912 238229018 -15027565 + (TCTA)n Simple_repeat Simple_repeat 1 106 0 2382 85 0 0 chr2 238229054 238229359 -15027224 - AluY SINE Alu -6 305 1 967 31 16 0 chr2 238229910 238230037 -15026546 + (TCCA)n Simple_repeat Simple_repeat 4 132 0 241 271 57 0 chr2 238230040 238230110 -15026473 - L2 LINE L2 -13 3300 3227 1948 160 0 3 chr2 238230729 238231036 -15025547 + AluJo SINE Alu 3 308 -4 34 0 0 0 chr2 238231400 238231434 -15025149 + AT_rich Low_complexity Low_complexity 1 34 0 405 281 70 16 chr2 238232098 238232226 -15024357 - L2 LINE L2 0 3272 3138 21 0 0 0 chr2 238232468 238232489 -15024094 + AT_rich Low_complexity Low_complexity 1 21 0 2141 112 6 13 chr2 238232489 238232801 -15023782 - AluSx SINE Alu -2 310 1 252 0 0 0 chr2 238233128 238233156 -15023427 + (T)n Simple_repeat Simple_repeat 1 28 0 1717 155 50 4 chr2 238233706 238233984 -15022599 + AluJo SINE Alu 1 291 -21 280 328 78 26 chr2 238235317 238235509 -15021074 + L3 LINE CR1 1373 1574 -3 1964 103 0 24 chr2 238236344 238236634 -15019949 + AluSx SINE Alu 1 283 -29 216 0 0 0 chr2 238236643 238236667 -15019916 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 955 215 36 39 chr2 238236867 238237146 -15019437 - L1MA10 LINE L1 -1 6333 6056 715 280 47 8 chr2 238237178 238237414 -15019169 - MIR SINE MIR 0 262 18 1997 166 0 7 chr2 238237538 238237846 -15018737 + AluJb SINE Alu 1 306 -6 2267 165 63 8 chr2 238238008 238238500 -15018083 - L1MA9 LINE L1 0 6312 5794 11780 128 39 20 chr2 238238511 238240575 -15016008 + Tigger1 DNA MER2_type 1 2102 -316 237 118 0 0 chr2 238240571 238240605 -15015978 + Tigger1 DNA MER2_type 2385 2418 0 * 576 165 0 28 chr2 238240619 238240728 -15015855 + L1M2 LINE L1 5683 5788 -524 221 296 24 0 chr2 238240729 238240854 -15015729 + (TA)n Simple_repeat Simple_repeat 2 129 0 1391 133 4 17 chr2 238240857 238241097 -15015486 - L1MA9 LINE L1 -521 5791 5555 1308 196 7 79 chr2 238241097 238241501 -15015082 - L1MA9 LINE L1 -890 5256 4882 348 24 0 0 chr2 238242131 238242172 -15014411 + (TG)n Simple_repeat Simple_repeat 1 41 0 1399 158 0 14 chr2 238242434 238242649 -15013934 + AluJb SINE Alu 97 308 -4 37 32 0 16 chr2 238243824 238243868 -15012715 + AT_rich Low_complexity Low_complexity 1 45 -16 2363 76 0 0 chr2 238243868 238244157 -15012426 - AluY SINE Alu -22 289 1 37 32 0 16 chr2 238244157 238244174 -15012409 + AT_rich Low_complexity Low_complexity 45 61 0 21 0 0 0 chr2 238244372 238244393 -15012190 + AT_rich Low_complexity Low_complexity 1 21 0 203 190 86 35 chr2 238244758 238244816 -15011767 - MER5A DNA MER1_type -117 72 12 204 292 0 15 chr2 238245545 238245610 -15010973 - L2 LINE L2 -26 3287 3224 * 675 191 52 52 chr2 238245601 238245774 -15010809 - MIR SINE MIR -4 258 86 273 331 87 106 chr2 238245895 238246149 -15010434 - L2 LINE L2 -3 3269 3021 507 367 135 17 chr2 238246433 238247084 -15009499 - L2 LINE L2 -459 2855 2128 231 121 0 45 chr2 238249178 238249244 -15007339 + (TCCC)n Simple_repeat Simple_repeat 1 63 0 512 223 82 0 chr2 238250206 238250385 -15006198 - L1MB7 LINE L1 -61 6123 5924 2243 77 0 3 chr2 238251303 238251590 -15004993 - AluY SINE Alu -25 286 1 2328 102 0 0 chr2 238253078 238253382 -15003201 - AluSx SINE Alu -8 304 1 429 70 0 0 chr2 238254767 238254824 -15001759 + (TCTA)n Simple_repeat Simple_repeat 2 58 0 197 169 35 35 chr2 238254868 238255010 -15001573 + (TA)n Simple_repeat Simple_repeat 1 142 0 2154 208 75 7 chr2 238255048 238255491 -15001092 - MLT2B3 LTR ERVL -81 473 1 1453 186 13 80 chr2 238255704 238256005 -15000578 + AluJo SINE Alu 1 281 -31 342 0 0 0 chr2 238256030 238256068 -15000515 + (CA)n Simple_repeat Simple_repeat 2 39 0 406 267 193 30 chr2 238257017 238257169 -14999414 + MIR SINE MIR 28 222 -40 923 127 0 0 chr2 238257169 238257295 -14999288 + FLAM_C SINE Alu 1 126 -7 406 267 193 30 chr2 238257295 238257344 -14999239 + MIR SINE MIR 222 262 0 1643 155 34 8 chr2 238257348 238257613 -14998970 - AluJo SINE Alu -27 285 14 239 236 45 22 chr2 238258399 238258488 -14998095 - MLT1L LTR MaLR -150 465 375 383 277 100 8 chr2 238260749 238260879 -14995704 + MIR SINE MIR 1 142 -120 1585 130 50 128 chr2 238261574 238261770 -14994813 + MLT1B LTR MaLR 1 211 -179 369 0 0 0 chr2 238261770 238261811 -14994772 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 2929 81 0 8 chr2 238261811 238262208 -14994375 - L1PA8 LINE L1 -17 6155 5762 1585 130 50 128 chr2 238262208 238262433 -14994150 + MLT1B LTR MaLR 209 390 0 2601 42 0 0 chr2 238263704 238264010 -14992573 - AluY SINE Alu -5 306 1 22 0 0 0 chr2 238264140 238264162 -14992421 + AT_rich Low_complexity Low_complexity 1 22 0 2346 177 81 10 chr2 238264164 238264685 -14991898 - MER90 LTR ERV1 0 614 57 219 339 70 37 chr2 238264750 238264992 -14991591 - L2 LINE L2 -2016 1298 1049 207 88 0 0 chr2 238266061 238266095 -14990488 + (TAGA)n Simple_repeat Simple_repeat 2 35 0 761 49 10 0 chr2 238266424 238266526 -14990057 + (TTCC)n Simple_repeat Simple_repeat 1 103 0 1208 164 24 61 chr2 238266535 238266828 -14989755 - MER90 LTR ERV1 -196 418 137 350 224 112 31 chr2 238266828 238266926 -14989657 - L2 LINE L2 -23 3249 3144 696 265 42 26 chr2 238266980 238267244 -14989339 - MLT2C1 LTR ERVL -50 347 80 333 233 0 0 chr2 238267245 238267305 -14989278 + AluJ/FLAM SINE Alu 1 60 -242 5786 106 65 11 chr2 238267305 238268300 -14988283 - L1PBa LINE L1 -4423 2440 1392 985 185 5 14 chr2 238268277 238268493 -14988090 - L1PBa LINE L1 -6647 216 3 * 23 33 0 0 chr2 238268567 238268597 -14987986 + AT_rich Low_complexity Low_complexity 1 30 0 620 223 27 27 chr2 238268644 238268792 -14987791 + MER5B DNA MER1_type 25 172 -6 1557 154 3 121 chr2 238269342 238269672 -14986911 + AluJo SINE Alu 1 291 -11 1715 199 123 44 chr2 238269838 238270341 -14986242 - MER44D DNA MER2_type -7 598 1 279 134 78 0 chr2 238270642 238270706 -14985877 - MLT2C1 LTR ERVL -332 65 7 817 391 16 50 chr2 238271178 238271498 -14985085 - MER3 DNA MER1_type 0 2371 2063 529 223 9 0 chr2 238271493 238271605 -14984978 - MER3 DNA MER1_type -60 149 37 * 1419 177 72 85 chr2 238271749 238271833 -14984750 - LTR8A LTR ERV1 0 727 643 2071 130 11 0 chr2 238271833 238272118 -14984465 + AluSg SINE Alu 1 288 -22 1419 177 72 85 chr2 238272118 238272480 -14984103 - LTR8A LTR ERV1 -84 643 287 852 152 8 0 chr2 238272521 238272726 -14983857 + FLAM_C SINE Alu 1 206 0 575 224 63 74 chr2 238272734 238272987 -14983596 - LTR8 LTR ERV1 -468 259 6 2327 73 20 17 chr2 238274316 238274616 -14981967 + AluSq SINE Alu 1 301 -12 2097 129 13 66 chr2 238275192 238275588 -14980995 + THE1C LTR MaLR 1 375 0 8626 104 97 45 chr2 238275588 238276989 -14979594 + THE1C-int LTR MaLR 1 1488 -92 2002 143 10 3 chr2 238276989 238277296 -14979287 + AluSx SINE Alu 1 309 -3 8626 104 97 45 chr2 238277296 238277393 -14979190 + THE1C-int LTR MaLR 1488 1578 -2 1439 147 11 18 chr2 238277433 238277705 -14978878 + THE1C LTR MaLR 100 369 -6 875 147 0 0 chr2 238278008 238278144 -14978439 + L1PB4 LINE L1 6006 6141 -15 2158 108 53 44 chr2 238278500 238278861 -14977722 + THE1B LTR MaLR 1 364 0 251 339 18 9 chr2 238278972 238279081 -14977502 - MIR SINE MIR -150 112 3 2069 135 53 31 chr2 238279581 238279937 -14976646 + THE1B LTR MaLR 1 364 0 2074 142 0 3 chr2 238280031 238280349 -14976234 - AluSx SINE Alu 0 312 1 351 260 26 0 chr2 238280899 238280976 -14975607 + MER5A DNA MER1_type 34 112 -77 21 0 0 0 chr2 238281269 238281290 -14975293 + AT_rich Low_complexity Low_complexity 1 21 0 560 302 69 13 chr2 238282026 238282258 -14974325 + MIR SINE MIR 6 250 -12 302 189 0 0 chr2 238282792 238282845 -14973738 + L1MC4 LINE L1 6652 6704 -1338 207 133 0 0 chr2 238282931 238282976 -14973607 + (T)n Simple_repeat Simple_repeat 1 45 0 448 15 0 30 chr2 238282976 238283042 -14973541 - L1PA2 LINE L1 0 6155 6092 473 138 4 2 chr2 238283252 238283483 -14973100 + AluSx SINE Alu 23 292 -20 396 250 184 0 chr2 238283548 238283912 -14972671 + L1MEc LINE L1 896 1372 -4938 512 217 63 14 chr2 238283940 238284083 -14972500 - MLT1G LTR MaLR 0 590 441 420 305 35 17 chr2 238284089 238284394 -14972189 - MLT1G LTR MaLR -235 320 19 929 168 0 0 chr2 238284413 238284556 -14972027 + FLAM_C SINE Alu 1 143 0 234 274 94 38 chr2 238285241 238285347 -14971236 - L2 LINE L2 -294 2978 2867 420 267 47 2 chr2 238285908 238286066 -14970517 - MIR SINE MIR -58 150 18 1859 158 3 3 chr2 238286103 238286395 -14970188 + AluJb SINE Alu 1 292 -20 1158 169 39 0 chr2 238286556 238286787 -14969796 - Tigger2 DNA MER2_type -1 2717 2478 309 132 0 0 chr2 238286787 238286840 -14969743 + MSTC LTR MaLR 328 380 -48 3717 167 45 8 chr2 238286945 238287663 -14968920 - Tigger2 DNA MER2_type -1974 744 1 464 294 101 1 chr2 238288286 238288509 -14968074 - L1MC/D LINE L1 -630 5612 5372 877 215 30 61 chr2 238288863 238289175 -14967408 - MLT1H1 LTR MaLR 0 555 237 3578 161 35 18 chr2 238289183 238289893 -14966690 + MER50 LTR ERV1 1 722 -12 233 176 15 59 chr2 238290264 238290332 -14966251 + LTR23 LTR ERV1 87 151 -286 801 232 6 0 chr2 238290636 238290800 -14965783 + MER45A DNA AcHobo 8 172 -6 1997 143 41 52 chr2 238290960 238291400 -14965183 - LTR23 LTR ERV1 0 437 3 5503 68 1 3 chr2 238291400 238292109 -14964474 - L1PA6 LINE L1 -2 6152 5445 25072 57 5 1 chr2 238292214 238295732 -14960851 - L1PA6 LINE L1 -682 5472 1942 961 209 16 126 chr2 238295737 238295937 -14960646 - LTR8A LTR ERV1 -349 378 240 1777 186 3 3 chr2 238295937 238296244 -14960339 + AluJb SINE Alu 1 307 -5 961 209 16 126 chr2 238296244 238296431 -14960152 - LTR8A LTR ERV1 -487 240 34 1112 172 19 0 chr2 238296463 238296672 -14959911 - MLT2B1 LTR ERVL -307 213 1 390 154 0 0 chr2 238297445 238297523 -14959060 + GA-rich Low_complexity Low_complexity 2 79 0 240 59 0 0 chr2 238301154 238301188 -14955395 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 7577 30 0 0 chr2 238302891 238303793 -14952790 + L1PA4 LINE L1 5254 6155 0 2197 155 22 33 chr2 238303805 238304256 -14952327 + L1MA9 LINE L1 5853 6298 -14 180 0 0 0 chr2 238304324 238304344 -14952239 + (T)n Simple_repeat Simple_repeat 1 20 0 1950 184 37 7 chr2 238304905 238305313 -14951270 - L1MA6 LINE L1 -57 6243 5824 1821 166 3 0 chr2 238305312 238305656 -14950927 + L1 LINE L1 4726 5070 -1076 * 2607 224 33 26 chr2 238305677 238305961 -14950622 - L1M4 LINE L1 -825 5321 5040 2181 130 7 0 chr2 238305961 238306261 -14950322 - AluSx SINE Alu -10 302 1 2607 224 33 26 chr2 238306261 238306774 -14949809 - L1M4 LINE L1 -1106 5040 4519 624 248 53 16 chr2 238306774 238307077 -14949506 - L1MEd LINE L1 -4731 1400 1131 676 299 40 19 chr2 238307160 238307585 -14948998 - L1MEc LINE L1 -5465 931 498 386 302 87 12 chr2 238307709 238307881 -14948702 - L1MEc LINE L1 -6094 302 118 2259 103 0 17 chr2 238307911 238308213 -14948370 + AluSx SINE Alu 1 297 -15 1340 279 66 50 chr2 238308353 238309170 -14947413 - L1MEd LINE L1 -5156 963 134 949 143 23 94 chr2 238309373 238309550 -14947033 - L1MA7 LINE L1 -5 6286 6133 1809 161 16 10 chr2 238309550 238309854 -14946729 + AluJb SINE Alu 1 306 -6 949 143 23 94 chr2 238309854 238309942 -14946641 - L1MA7 LINE L1 -158 6133 6040 2158 107 14 0 chr2 238310062 238310351 -14946232 - AluSg1 SINE Alu -16 293 1 284 320 103 29 chr2 238310423 238310598 -14945985 - MIR SINE MIR -1 261 74 4727 34 0 2 chr2 238311726 238312288 -14944295 - L1PA3 LINE L1 0 6155 5595 207 91 0 68 chr2 238312747 238312791 -14943792 + (TTA)n Simple_repeat Simple_repeat 2 42 0 790 90 0 0 chr2 238312971 238313082 -14943501 - L1PA5 LINE L1 -3 6151 6041 1304 156 35 0 chr2 238313968 238314224 -14942359 - L1MC/D LINE L1 -761 5583 5319 930 169 0 3 chr2 238314229 238314588 -14941995 + (TA)n Simple_repeat Simple_repeat 1 359 0 35280 52 7 0 chr2 238314588 238320074 -14936509 - L1PA5 LINE L1 -11 6143 623 666 81 0 0 chr2 238320074 238320160 -14936423 - L1PA5 LINE L1 -6050 96 11 2337 112 0 0 chr2 238321402 238321705 -14934878 + AluSx SINE Alu 1 303 -9 688 180 29 37 chr2 238322407 238322652 -14933931 + L1MB8 LINE L1 5887 6173 -5 25 0 0 0 chr2 238322654 238322679 -14933904 + AT_rich Low_complexity Low_complexity 1 25 0 252 245 82 82 chr2 238322707 238322805 -14933778 - MER5B DNA MER1_type -59 119 22 203 175 0 16 chr2 238322903 238322966 -14933617 + (TTTG)n Simple_repeat Simple_repeat 2 63 0 2316 99 3 10 chr2 238323352 238323666 -14932917 - AluSx SINE Alu 0 312 1 25 0 0 0 chr2 238324272 238324297 -14932286 + AT_rich Low_complexity Low_complexity 1 25 0 365 265 128 0 chr2 238326240 238326342 -14930241 - L2 LINE L2 -3 3269 3155 2502 258 76 7 chr2 238327157 238327905 -14928678 + MER69 DNA AcHobo 2 801 -425 228 169 15 46 chr2 238327906 238327971 -14928612 + MER69 DNA AcHobo 2017 2079 -447 14180 31 0 0 chr2 238327985 238330389 -14926194 - L1PA4 LINE L1 -3 6152 3750 1970 169 38 56 chr2 238331210 238331769 -14924814 - MER67C LTR ERV1 -1 513 1 457 236 28 0 chr2 238332299 238332405 -14924178 + MER5A DNA MER1_type 4 112 -77 913 281 170 28 chr2 238332756 238333179 -14923404 + MLT1K LTR MaLR 100 582 -6 23 0 0 0 chr2 238333332 238333355 -14923228 + AT_rich Low_complexity Low_complexity 1 23 0 21 82 0 0 chr2 238333745 238333794 -14922789 + AT_rich Low_complexity Low_complexity 1 49 0 2183 121 18 87 chr2 238334884 238335273 -14921310 + THE1B LTR MaLR 2 363 -1 469 246 60 65 chr2 238335312 238335511 -14921072 - MIR SINE MIR 0 262 65 2334 92 13 0 chr2 238336675 238336980 -14919603 + AluSc SINE Alu 1 309 0 1995 185 0 25 chr2 238337470 238337826 -14918757 + MER7A DNA MER2_type 2 346 0 1201 206 40 69 chr2 238339150 238339224 -14917359 - MER69 DNA AcHobo -1 2525 2450 2282 92 0 19 chr2 238339224 238339539 -14917044 + AluSc SINE Alu 1 309 0 1201 206 40 69 chr2 238339539 238339842 -14916741 - MER69 DNA AcHobo -76 2450 2159 30541 51 6 5 chr2 238339885 238343655 -14912928 + L1P LINE L1 1 3773 -2373 842 267 23 14 chr2 238343763 238343980 -14912603 + MIR SINE MIR 44 262 0 2101 121 3 0 chr2 238344303 238344616 -14911967 - AluSq SINE Alu 0 314 1 201 351 42 42 chr2 238345281 238345449 -14911134 + L2 LINE L2 3142 3309 -4 753 57 64 55 chr2 238345453 238345508 -14911075 - L1MC/D LINE L1 -648 5520 5467 2272 126 0 0 chr2 238345508 238345810 -14910773 - AluSx SINE Alu -10 302 1 753 57 64 55 chr2 238345810 238345883 -14910700 - L1MC/D LINE L1 -701 5467 5406 2581 99 24 44 chr2 238346193 238346576 -14910007 + THE1C LTR MaLR 1 375 0 2330 236 53 47 chr2 238348383 238348984 -14907599 + MER77 LTR ERV1 1 605 0 772 146 0 49 chr2 238349218 238349341 -14907242 + FLAM_C SINE Alu 14 130 -13 312 330 76 0 chr2 238349712 238349830 -14906753 + L2 LINE L2 3141 3267 -5 1928 206 85 48 chr2 238349932 238350471 -14906112 + MER92B LTR ERV1 27 585 -51 1065 148 6 142 chr2 238350498 238350642 -14905941 + MER92B LTR ERV1 363 442 -194 189 0 0 0 chr2 238350642 238350663 -14905920 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 1065 148 6 142 chr2 238350663 238350835 -14905748 + MER92B LTR ERV1 442 636 0 1297 184 14 0 chr2 238351237 238351449 -14905134 + MER20 DNA MER1_type 1 215 -4 262 380 43 0 chr2 238353612 238353704 -14902879 - L3 LINE CR1 -98 1479 1384 211 257 40 40 chr2 238354308 238354382 -14902201 - MIR SINE MIR -35 227 154 248 184 20 0 chr2 238354499 238354548 -14902035 + L2 LINE L2 3258 3307 -6 34 0 0 0 chr2 238354770 238354804 -14901779 + AT_rich Low_complexity Low_complexity 1 34 0 265 116 23 0 chr2 238355201 238355244 -14901339 + L2 LINE L2 3264 3307 -6 318 225 67 0 chr2 238355290 238355379 -14901204 + Charlie7 DNA MER1_type 589 683 -1929 2335 109 0 3 chr2 238355690 238356001 -14900582 + AluSg SINE Alu 1 310 0 571 213 100 20 chr2 238357631 238357781 -14898802 - MER5B DNA MER1_type -7 171 10 2284 98 0 0 chr2 238357953 238358250 -14898333 + L1PB1 LINE L1 5855 6151 0 339 267 42 89 chr2 238358770 238358961 -14897622 - MER5A DNA MER1_type -7 182 1 362 236 57 28 chr2 238359068 238359174 -14897409 + L2 LINE L2 3181 3289 -24 1630 204 159 67 chr2 238361138 238361286 -14895297 + MLT1E2 LTR MaLR 21 154 -472 2041 123 0 36 chr2 238361286 238361588 -14894995 - AluSx SINE Alu -21 291 1 1630 204 159 67 chr2 238361588 238361992 -14894591 + MLT1E2 LTR MaLR 154 624 -2 27 0 0 0 chr2 238363451 238363478 -14893105 + AT_rich Low_complexity Low_complexity 1 27 0 190 326 124 16 chr2 238364623 238364752 -14891831 + L2 LINE L2 1538 1680 -1634 251 276 26 85 chr2 238364761 238364915 -14891668 + MER5A DNA MER1_type 12 167 -22 235 313 157 47 chr2 238365192 238365594 -14890989 + L2 LINE L2 2048 2493 -821 283 167 0 0 chr2 238365626 238365680 -14890903 + MADE1 DNA Mariner 26 79 -1 187 324 97 35 chr2 238365818 238365963 -14890620 + L2 LINE L2 2602 2755 -559 22 0 0 0 chr2 238366336 238366358 -14890225 + AT_rich Low_complexity Low_complexity 1 22 0 247 154 0 0 chr2 238366758 238366797 -14889786 - LTR40a LTR ERVL -7 512 474 1781 154 33 0 chr2 238366805 238367101 -14889482 - AluSx SINE Alu 0 305 1 635 309 51 36 chr2 238367407 238367740 -14888843 + LTR16A LTR ERVL 113 450 0 23 0 0 0 chr2 238367840 238367863 -14888720 + AT_rich Low_complexity Low_complexity 1 23 0 202 213 64 0 chr2 238368699 238368746 -14887837 - MIR3 SINE MIR -2 206 157 1487 133 65 12 chr2 238368746 238368994 -14887589 - L1MC1 LINE L1 -188 6145 5885 1189 65 0 0 chr2 238369001 238369140 -14887443 + AluSq/x SINE Alu 1 139 -174 2156 91 7 0 chr2 238369140 238369465 -14887118 + AluY SINE Alu 1 311 0 330 157 0 0 chr2 238369474 238369525 -14887058 - L1MC1 LINE L1 -455 5878 5828 830 156 17 11 chr2 238419530 238419709 -14836874 + CT-rich Low_complexity Low_complexity 1 180 0 180 111 0 0 chr2 238419728 238419755 -14836828 + (TTCC)n Simple_repeat Simple_repeat 2 28 0 1933 151 9 25 chr2 238419767 238420085 -14836498 - AluSq SINE Alu 0 313 1 2600 195 59 20 chr2 238420087 238420959 -14835624 - L1MB7 LINE L1 -355 6545 5631 26 74 0 0 chr2 238421576 238421630 -14834953 + AT_rich Low_complexity Low_complexity 1 54 0 189 254 17 51 chr2 238422331 238422390 -14834193 - L2 LINE L2 0 3313 3257 2682 204 74 14 chr2 238422858 238423570 -14833013 - L1MB7 LINE L1 -6103 760 6 679 168 6 8 chr2 238424382 238424562 -14832021 + AluSp SINE Alu 66 281 -32 286 333 44 19 chr2 238424589 238425021 -14831562 + L1M4 LINE L1 2284 2726 -3420 432 303 134 12 chr2 238425088 238425431 -14831152 - Charlie7 DNA MER1_type -2129 483 99 341 329 103 24 chr2 238425824 238426037 -14830546 + LTR16C LTR ERVL 260 489 -2 266 270 0 0 chr2 238426188 238426251 -14830332 + MLT1K LTR MaLR 142 204 -384 634 57 75 34 chr2 238426956 238427241 -14829342 + (TTATA)n Simple_repeat Simple_repeat 1 296 0 220 188 25 38 chr2 238427256 238427336 -14829247 + (TA)n Simple_repeat Simple_repeat 1 79 0 514 114 0 67 chr2 238427352 238427457 -14829126 + MER4A LTR ERV1 1 98 -566 1326 158 113 8 chr2 238427457 238427768 -14828815 + MER4A LTR ERV1 263 664 0 308 103 17 0 chr2 238427911 238427969 -14828614 + (TA)n Simple_repeat Simple_repeat 2 60 0 269 290 31 62 chr2 238428189 238428351 -14828232 - L1ME LINE L1 -513 5657 5501 2235 204 34 62 chr2 238428588 238429156 -14827427 + MLT2B3 LTR ERVL 1 552 -2 1610 180 153 24 chr2 238429283 238429661 -14826922 - MSTA LTR MaLR 0 428 2 429 244 101 34 chr2 238429665 238429903 -14826680 - L1MEd LINE L1 -4883 1236 983 790 211 11 22 chr2 238429971 238430151 -14826432 + MER5B DNA MER1_type 1 178 0 3538 210 13 23 chr2 238430441 238431132 -14825451 - L1PA13 LINE L1 -6103 684 1 7387 145 38 8 chr2 238431144 238433017 -14823566 - L1PA15-16 LINE L1 -4270 2579 29 203 259 19 0 chr2 238433190 238433244 -14823339 - L2 LINE L2 -2 3311 3257 762 241 39 15 chr2 238433429 238433632 -14822951 - L1ME LINE L1 -1172 4974 4767 21 89 0 0 chr2 238434842 238434898 -14821685 + AT_rich Low_complexity Low_complexity 1 56 0 279 208 149 10 chr2 238435945 238436047 -14820536 - L1ME1 LINE L1 -25 6141 6042 198 71 0 0 chr2 238436062 238436090 -14820493 + (T)n Simple_repeat Simple_repeat 1 28 0 2282 103 0 6 chr2 238436867 238437178 -14819405 - AluSx SINE Alu -3 309 1 1333 263 46 5 chr2 238438230 238438603 -14817980 - MER97a DNA MER1_type? -384 510 123 374 281 101 44 chr2 238439126 238439471 -14817112 + LTR33 LTR ERVL 51 454 -67 22 0 0 0 chr2 238439733 238439755 -14816828 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr2 238439755 238439778 -14816805 + (TA)n Simple_repeat Simple_repeat 1 23 0 817 180 0 0 chr2 238439779 238439918 -14816665 - FLAM_C SINE Alu -3 140 2 5392 226 20 19 chr2 238439919 238440370 -14816213 - L1PA13 LINE L1 -4288 2509 2060 2243 107 51 25 chr2 238440370 238440725 -14815858 - THE1B LTR MaLR 0 364 1 5392 226 20 19 chr2 238440725 238441706 -14814877 - L1PA13 LINE L1 -4737 2060 1059 289 331 83 35 chr2 238441953 238442098 -14814485 + MIR SINE MIR 111 262 0 538 307 74 48 chr2 238442601 238443206 -14813377 - L1ME3A LINE L1 -278 5884 5264 5656 128 9 8 chr2 238443236 238445102 -14811481 - L1PA16 LINE L1 -7 6159 4284 260 116 23 0 chr2 238445105 238445148 -14811435 - L1 LINE L1 -1869 4277 4234 * 1909 212 10 10 chr2 238445145 238445555 -14811028 + L1P LINE L1 3805 4214 -1932 297 0 0 0 chr2 238445567 238445600 -14810983 + (TG)n Simple_repeat Simple_repeat 2 34 0 * 387 0 0 0 chr2 238445599 238445642 -14810941 + (TA)n Simple_repeat Simple_repeat 1 43 0 1564 160 23 0 chr2 238445809 238446065 -14810518 - HUERS-P3 LTR ERV1 -7778 1141 880 2012 242 11 31 chr2 238446160 238446680 -14809903 - HUERS-P3 LTR ERV1 -6908 510 1 3418 114 45 95 chr2 238446680 238447354 -14809229 - LTR9B LTR ERV1 0 644 5 685 258 28 6 chr2 238447734 238447912 -14808671 - MIR SINE MIR -6 256 75 30 27 0 0 chr2 238449291 238449328 -14807255 + AT_rich Low_complexity Low_complexity 1 37 0 282 248 33 16 chr2 238449607 238449728 -14806855 + (TA)n Simple_repeat Simple_repeat 1 123 0 351 96 0 0 chr2 238449893 238449945 -14806638 + (GA)n Simple_repeat Simple_repeat 2 53 0 852 220 22 16 chr2 238450207 238450389 -14806194 + MER5A DNA MER1_type 1 183 -6 294 368 87 9 chr2 238450442 238450673 -14805910 + L2 LINE L2 157 405 -2909 22 56 0 0 chr2 238450946 238450982 -14805601 + AT_rich Low_complexity Low_complexity 1 36 0 2124 107 3 3 chr2 238450995 238451286 -14805297 - AluSg SINE Alu -19 291 1 566 238 48 77 chr2 238451876 238452124 -14804459 - MER112 DNA MER1_type -1 259 19 397 261 91 36 chr2 238452241 238452406 -14804177 - MER69 DNA AcHobo -2 2524 2351 619 228 52 0 chr2 238452530 238452666 -14803917 - MER69 DNA AcHobo -1050 176 34 1575 155 87 12 chr2 238452918 238453240 -14803343 + MLT2C1 LTR ERVL 1 346 -51 330 143 0 0 chr2 238453242 238453305 -14803278 + (TG)n Simple_repeat Simple_repeat 2 64 0 305 279 48 39 chr2 238453646 238453875 -14802708 + L1MEc LINE L1 1259 1489 -4907 565 304 102 27 chr2 238454151 238454562 -14802021 + L1MEc LINE L1 1875 2316 -4080 1071 113 0 0 chr2 238454622 238454764 -14801819 + AluSp SINE Alu 1 142 -171 216 289 114 26 chr2 238456092 238456206 -14800377 + MIR SINE MIR 65 188 -74 334 113 14 14 chr2 238456877 238456948 -14799635 + (TA)n Simple_repeat Simple_repeat 2 72 0 232 135 39 0 chr2 238456968 238457020 -14799563 + (TA)n Simple_repeat Simple_repeat 1 54 0 436 74 75 51 chr2 238457066 238457300 -14799283 + (TTATA)n Simple_repeat Simple_repeat 1 239 0 390 97 89 0 chr2 238457318 238457442 -14799141 + (TTATA)n Simple_repeat Simple_repeat 5 139 0 1341 168 153 37 chr2 238457645 238457972 -14798611 - MLT1A1 LTR MaLR 0 365 1 422 316 75 16 chr2 238457972 238458157 -14798426 - MIR SINE MIR -49 159 1 302 301 0 0 chr2 238458368 238458441 -14798142 + L2 LINE L2 3241 3313 0 387 357 91 0 chr2 238458525 238458724 -14797859 + MIR SINE MIR 2 218 -44 21 36 0 0 chr2 238458971 238458999 -14797584 + AT_rich Low_complexity Low_complexity 1 28 0 2054 98 6 47 chr2 238459206 238459524 -14797059 - AluSx SINE Alu -7 305 1 570 260 71 28 chr2 238460172 238460426 -14796157 - L1ME LINE L1 -580 5565 5301 495 268 124 40 chr2 238460514 238461133 -14795450 - L1ME LINE L1 -1315 4814 4144 538 301 61 81 chr2 238461148 238461825 -14794758 - L1ME LINE L1 -4865 1254 592 617 273 26 87 chr2 238462264 238462528 -14794055 - MIR SINE MIR -10 252 5 2176 198 49 0 chr2 238462931 238463376 -14793207 - MLT1C LTR MaLR 0 467 1 516 287 122 17 chr2 238463428 238463658 -14792925 - MIR SINE MIR 0 262 9 1770 183 3 0 chr2 238463828 238464129 -14792454 - AluJb SINE Alu -10 302 1 845 216 86 29 chr2 238464183 238464428 -14792155 - MER2 DNA MER2_type -1 344 86 466 202 18 9 chr2 238464647 238464756 -14791827 - AluSp SINE Alu -203 110 1 5058 146 9 9 chr2 238464760 238465850 -14790733 - L1PA16 LINE L1 -17 6149 5057 7610 221 20 58 chr2 238465850 238466565 -14790018 + L1 LINE L1 2960 3701 -2445 279 0 0 0 chr2 238466565 238466596 -14789987 + (CA)n Simple_repeat Simple_repeat 2 32 0 1867 168 0 3 chr2 238466602 238466894 -14789689 + AluJb SINE Alu 1 291 -21 7610 221 20 58 chr2 238466894 238468352 -14788231 + L1 LINE L1 3706 5057 -1089 618 170 11 0 chr2 238468363 238468457 -14788126 - MER2 DNA MER2_type -250 95 1 24 0 0 29 chr2 238469182 238469194 -14787389 + AT_rich Low_complexity Low_complexity 1 12 -22 1322 171 13 103 chr2 238469194 238469504 -14787079 + AluJo SINE Alu 1 282 -30 24 0 0 29 chr2 238469504 238469526 -14787057 + AT_rich Low_complexity Low_complexity 12 34 0 2212 139 58 12 chr2 238469711 238470143 -14786440 + L1MB3 LINE L1 1932 2383 -4001 2787 211 45 6 chr2 238470143 238471260 -14785323 + L1MB3 LINE L1 4915 6073 -346 2278 255 76 15 chr2 238471566 238472369 -14784214 - L1ME1 LINE L1 -176 6250 5400 1054 219 17 0 chr2 238472388 238472626 -14783957 - L1ME1 LINE L1 -1277 5129 4888 296 248 23 5 chr2 238472635 238472751 -14783832 - L1ME1 LINE L1 -4162 2267 2125 1563 257 54 50 chr2 238472873 238473667 -14782916 - L1ME1 LINE L1 -4437 1969 1173 812 117 0 0 chr2 238473668 238473779 -14782804 + AluSg/x SINE Alu 188 298 -14 456 313 38 69 chr2 238473781 238474229 -14782354 - L1ME1 LINE L1 -5230 1179 746 699 248 0 0 chr2 238474356 238474501 -14782082 + FRAM SINE Alu 2 146 -30 21 0 0 0 chr2 238474501 238474522 -14782061 + AT_rich Low_complexity Low_complexity 1 21 0 2090 103 3 20 chr2 238475741 238476043 -14780540 + AluSx SINE Alu 1 297 -15 30 103 0 0 chr2 238476473 238476580 -14780003 + AT_rich Low_complexity Low_complexity 1 107 0 229 239 112 88 chr2 238476769 238476974 -14779609 - L1MC/D LINE L1 -1924 5884 5675 415 213 180 25 chr2 238476974 238477096 -14779487 - MER58B DNA MER1_type -10 331 191 202 0 91 0 chr2 238477184 238477217 -14779366 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 2218 19 0 4 chr2 238477217 238477476 -14779107 - L1PA3 LINE L1 -10 6145 5888 32 26 0 0 chr2 238478017 238478056 -14778527 + AT_rich Low_complexity Low_complexity 1 39 0 242 308 60 43 chr2 238478955 238479072 -14777511 - MIR SINE MIR -20 242 124 234 0 0 0 chr2 238479922 238479948 -14776635 + (T)n Simple_repeat Simple_repeat 1 26 0 1627 252 82 25 chr2 238480087 238480141 -14776442 - L1MC3 LINE L1 -798 5348 5299 2202 108 3 7 chr2 238480141 238480448 -14776135 - AluSp SINE Alu -7 306 1 1627 252 82 25 chr2 238480448 238481096 -14775487 - L1MC3 LINE L1 -847 5299 4689 2292 131 16 13 chr2 238481096 238481470 -14775113 - THE1C LTR MaLR 0 375 1 1627 252 82 25 chr2 238481470 238481720 -14774863 - L1MC3 LINE L1 -1457 4689 4455 2233 101 0 7 chr2 238481720 238482018 -14774565 + AluSc SINE Alu 1 296 -13 1627 252 82 25 chr2 238482018 238482267 -14774316 - L1MC3 LINE L1 -1691 4455 5161 8450 43 4 0 chr2 238482267 238483232 -14773351 - LTR5 LTR ERVK 0 969 1 1627 252 82 25 chr2 238483232 238483422 -14773161 - L1MC3 LINE L1 -984 5162 4984 * 1721 211 51 7 chr2 238483418 238484076 -14772507 + L1MC/D LINE L1 4967 5642 -600 297 109 0 0 chr2 238485213 238485259 -14771324 + (TCTCTG)n Simple_repeat Simple_repeat 3 48 0 32 0 0 0 chr2 238485520 238485552 -14771031 + AT_rich Low_complexity Low_complexity 1 32 0 1809 49 4 0 chr2 238485552 238485778 -14770805 - L1PA5 LINE L1 -5 6149 5923 1979 204 25 5 chr2 238486073 238486476 -14770107 + LTR57 LTR ERVL 1 411 0 3709 140 25 21 chr2 238486476 238486591 -14769992 + LTR57-int LTR ERVL 1 114 -5229 2309 81 3 7 chr2 238486591 238486898 -14769685 - AluSx SINE Alu -6 306 1 3709 140 25 21 chr2 238486898 238487624 -14768959 + LTR57-int LTR ERVL 114 887 -4456 1017 336 46 15 chr2 238487733 238488209 -14768374 + L2 LINE L2 1328 1818 -1496 1205 276 29 38 chr2 238488256 238488645 -14767938 + MER69 DNA AcHobo 127 513 -2013 2327 109 0 0 chr2 238488645 238488949 -14767634 + AluSx SINE Alu 1 304 -8 1205 276 29 38 chr2 238488949 238489005 -14767578 + MER69 DNA AcHobo 513 568 -1958 * 1465 205 74 34 chr2 238489003 238489500 -14767083 + MER69 DNA AcHobo 2010 2526 0 423 0 0 0 chr2 238489632 238489679 -14766904 + (TCTA)n Simple_repeat Simple_repeat 2 48 0 314 253 20 10 chr2 238489680 238489779 -14766804 + (TA)n Simple_repeat Simple_repeat 1 100 0 329 298 41 73 chr2 238490566 238490784 -14765799 + L2 LINE L2 3099 3309 -4 2234 99 0 3 chr2 238490956 238491249 -14765334 - AluSg SINE Alu -18 292 1 2184 115 3 0 chr2 238491869 238492164 -14764419 + AluSq SINE Alu 1 296 -17 234 368 45 32 chr2 238492703 238492858 -14763725 + MER5A DNA MER1_type 11 167 -22 2127 114 3 3 chr2 238493125 238493424 -14763159 + AluSx SINE Alu 1 299 -13 975 54 78 0 chr2 238493879 238494008 -14762575 - MER85 DNA T2_type 0 139 1 201 239 0 22 chr2 238494298 238494344 -14762239 + GA-rich Low_complexity Low_complexity 1 45 0 2333 99 3 0 chr2 238494670 238494974 -14761609 - AluSq SINE Alu -8 305 1 2250 107 0 3 chr2 238495713 238496003 -14760580 - AluSq SINE Alu -24 289 1 221 279 209 0 chr2 238496319 238496405 -14760178 + MIR3 SINE MIR 77 180 -28 222 324 56 0 chr2 238496570 238496641 -14759942 - MIR SINE MIR -73 189 115 324 0 0 0 chr2 238496691 238496727 -14759856 + (TG)n Simple_repeat Simple_repeat 2 37 0 187 393 36 9 chr2 238496762 238496874 -14759709 - L2 LINE L2 -20 3293 3179 204 217 0 0 chr2 238498417 238498463 -14758120 + (CATA)n Simple_repeat Simple_repeat 4 49 0 6630 114 29 15 chr2 238498776 238499832 -14756751 - MER11C LTR ERVK 0 1071 1 670 272 82 17 chr2 238499884 238500116 -14756467 - MIR SINE MIR -8 254 8 212 368 0 0 chr2 238500267 238500343 -14756240 + CT-rich Low_complexity Low_complexity 3 78 0 508 121 41 10 chr2 238501541 238501644 -14754939 + MLT1A1 LTR MaLR 278 365 0 419 354 153 0 chr2 238501989 238502297 -14754286 - L3 LINE CR1 -11 1566 1212 324 259 84 14 chr2 238502491 238502634 -14753949 - L1MDb LINE L1 -4994 1414 1262 341 278 21 16 chr2 238503098 238503292 -14753291 - L1MDb LINE L1 -5093 1316 1122 24 32 0 0 chr2 238503421 238503452 -14753131 + AT_rich Low_complexity Low_complexity 1 31 0 318 387 111 12 chr2 238503814 238504057 -14752526 - L1MDb LINE L1 -5995 592 326 330 26 0 0 chr2 238504064 238504103 -14752480 + (CA)n Simple_repeat Simple_repeat 2 40 0 348 302 99 56 chr2 238504302 238504385 -14752198 - L3 LINE CR1 -530 1047 969 2813 135 17 0 chr2 238504385 238504806 -14751777 + MSTA LTR MaLR 1 428 0 348 302 99 56 chr2 238504806 238504974 -14751609 - L3 LINE CR1 -608 969 785 307 102 34 0 chr2 238505018 238505077 -14751506 - L1PA16 LINE L1 -9 6157 6097 * 496 199 3 0 chr2 238505055 238505165 -14751418 - L1PA16 LINE L1 -80 6085 5974 35 41 0 0 chr2 238505620 238505669 -14750914 + AT_rich Low_complexity Low_complexity 1 49 0 459 255 93 87 chr2 238506591 238507182 -14749401 + MLT1F LTR MaLR 5 555 0 188 324 36 27 chr2 238507290 238507401 -14749182 - MIR SINE MIR -76 186 75 380 286 26 7 chr2 238507925 238508079 -14748504 + MERVL LTR ERVL 3353 3509 -1976 512 338 126 33 chr2 238508216 238508558 -14748025 + MERVL LTR ERVL 3703 4116 -1538 1678 133 0 8 chr2 238508558 238508792 -14747791 - AluSx SINE Alu -55 257 26 512 338 126 33 chr2 238508792 238508996 -14747587 + MERVL LTR ERVL 4116 4300 -1354 257 341 72 29 chr2 238509131 238509407 -14747176 + MERVL LTR ERVL 4524 4811 -953 858 196 0 16 chr2 238509414 238509603 -14746980 + LTR41 LTR ERVL 2 187 -586 571 304 66 36 chr2 238509790 238510122 -14746461 + MERVL LTR ERVL 4613 4954 -810 361 286 25 34 chr2 238510122 238510241 -14746342 - L1MEc LINE L1 -4186 2210 2093 3697 273 93 32 chr2 238510341 238512299 -14744284 - L1MEc LINE L1 -4274 2122 45 759 327 61 9 chr2 238512310 238512640 -14743943 + MERVL LTR ERVL 4945 5291 -473 815 319 185 37 chr2 238512652 238513463 -14743120 + L2 LINE L2 221 1151 -2163 208 284 45 0 chr2 238513648 238513715 -14742868 - L2 LINE L2 -1327 1987 1918 882 61 30 15 chr2 238513944 238514075 -14742508 + AluSq/x SINE Alu 5 137 -175 1376 176 17 14 chr2 238514242 238514537 -14742046 + AluSq SINE Alu 5 300 -13 542 321 67 43 chr2 238515060 238515481 -14741102 + LTR16A LTR ERVL 27 457 0 214 184 41 41 chr2 238516471 238516520 -14740063 - MIR SINE MIR -182 80 32 210 316 0 0 chr2 238516919 238516995 -14739588 - L2 LINE L2 -968 2346 2271 1769 183 3 3 chr2 238517035 238517336 -14739247 - AluJo SINE Alu -11 301 1 21 0 0 0 chr2 238517367 238517388 -14739195 + AT_rich Low_complexity Low_complexity 1 21 0 33 0 0 0 chr2 238517599 238517632 -14738951 + AT_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr2 238517880 238517902 -14738681 + AT_rich Low_complexity Low_complexity 1 22 0 1421 190 21 18 chr2 238518322 238518654 -14737929 + L1MB3 LINE L1 5847 6179 -4 2702 197 54 0 chr2 238519815 238520348 -14736235 - LTR31 LTR ERV1 0 619 58 531 13 0 38 chr2 238520352 238520431 -14736152 + (CAAAA)n Simple_repeat Simple_repeat 3 78 0 23 0 0 0 chr2 238520700 238520723 -14735860 + AT_rich Low_complexity Low_complexity 1 23 0 7440 204 17 18 chr2 238520738 238521505 -14735078 - L1PA16 LINE L1 -1 6165 5399 2169 86 3 64 chr2 238521505 238521819 -14734764 - AluSx SINE Alu -17 295 1 7440 204 17 18 chr2 238521819 238522753 -14733830 - L1PA16 LINE L1 -767 5399 4466 2218 131 0 0 chr2 238522753 238523051 -14733532 - AluSx SINE Alu -12 300 3 7440 204 17 18 chr2 238523051 238524084 -14732499 - L1PA16 LINE L1 -1700 4466 3435 627 220 11 73 chr2 238524415 238524592 -14731991 + MER5A DNA MER1_type 2 167 -22 300 290 104 62 chr2 238524614 238524873 -14731710 + MLT1L LTR MaLR 21 290 -325 244 281 53 0 chr2 238525059 238525173 -14731410 + MLT1L LTR MaLR 496 615 0 464 281 0 22 chr2 238525740 238525875 -14730708 - MER68 LTR ERV1 -4 558 427 723 227 122 9 chr2 238525996 238526225 -14730358 - MER68 LTR ERV1 -303 259 5 1552 185 3 43 chr2 238526559 238526862 -14729721 + AluJo SINE Alu 2 292 -20 260 326 106 41 chr2 238527796 238528014 -14728569 - MIR SINE MIR -20 242 11 2271 84 3 31 chr2 238528587 238528909 -14727674 + AluSp SINE Alu 1 313 0 205 278 72 93 chr2 238528919 238529016 -14727567 - MER5A DNA MER1_type -88 101 7 48 53 0 0 chr2 238529619 238529695 -14726888 + AT_rich Low_complexity Low_complexity 1 76 0 1480 184 39 58 chr2 238529695 238529770 -14726813 + L1MC/D LINE L1 1923 1998 -4542 1990 158 0 0 chr2 238529770 238530067 -14726516 + AluSx SINE Alu 1 297 -15 1480 184 39 58 chr2 238530067 238530404 -14726179 + L1MC/D LINE L1 1998 2327 -4213 2897 139 83 23 chr2 238530404 238530972 -14725611 - MER4B LTR ERV1 0 610 9 201 74 0 0 chr2 238531074 238531101 -14725482 + (TA)n Simple_repeat Simple_repeat 1 27 0 774 170 54 22 chr2 238531101 238531325 -14725258 + L1MC/D LINE L1 2334 2564 -3976 1372 277 31 45 chr2 238531489 238531998 -14724585 + L1PA13 LINE L1 1 502 -6285 * 1428 240 8 8 chr2 238531996 238532355 -14724228 + L1PA13 LINE L1 2855 3213 -3584 225 170 0 0 chr2 238532358 238532411 -14724172 + L1MC/D LINE L1 3455 3507 -3033 2526 275 54 27 chr2 238532413 238533739 -14722844 + L1MC/D LINE L1 3610 4971 -1569 1482 181 37 3 chr2 238533789 238534088 -14722495 + L1MC/D LINE L1 5888 6196 -440 403 127 0 0 chr2 238534088 238534147 -14722436 + L1MD2 LINE L1 6278 6340 -19 2366 260 56 26 chr2 238534179 238535091 -14721492 - L1MEc LINE L1 -5421 975 37 4596 148 79 19 chr2 238535395 238536247 -14720336 - MER4D LTR ERV1 0 903 1 3354 141 61 15 chr2 238536341 238536951 -14719632 - LTR9B LTR ERV1 0 644 7 12096 171 12 1 chr2 238536959 238539007 -14717576 - HUERS-P3 LTR ERV1 -4 8915 6845 * 29445 163 40 22 chr2 238539000 238543953 -14712630 - HUERS-P3 LTR ERV1 -2294 6625 1482 190 261 109 0 chr2 238543953 238544045 -14712538 + MER5C DNA MER1_type 1 102 -222 29445 163 40 22 chr2 238544045 238544290 -14712293 - HUERS-P3 LTR ERV1 -7437 1482 1243 2144 114 31 45 chr2 238544400 238544417 -14712166 + LTR57-int LTR ERVL 894 910 -4433 2101 113 0 3 chr2 238544417 238544728 -14711855 - AluSx SINE Alu 0 310 1 2144 114 31 45 chr2 238544728 238545131 -14711452 + LTR57-int LTR ERVL 910 1309 -4034 * 18784 169 26 30 chr2 238545125 238546352 -14710231 + LTR57-int LTR ERVL 1838 3068 -2275 2216 122 0 3 chr2 238546352 238546663 -14709920 - AluSx SINE Alu -2 310 1 18784 169 26 30 chr2 238546663 238548635 -14707948 + LTR57-int LTR ERVL 3068 5024 -319 2509 124 53 12 chr2 238548635 238549046 -14707537 - MSTA LTR MaLR 0 428 1 18784 169 26 30 chr2 238549046 238549365 -14707218 + LTR57-int LTR ERVL 5024 5343 0 1083 232 11 21 chr2 238549367 238549724 -14706859 + LTR57 LTR ERVL 3 404 -7 574 283 112 22 chr2 238550476 238550699 -14705884 + MIR SINE MIR 9 251 -11 219 308 29 39 chr2 238550785 238550889 -14705694 + L2 LINE L2 297 399 -2915 308 298 42 12 chr2 238552023 238552191 -14704392 - L1ME LINE L1 -373 5748 5576 324 352 41 7 chr2 238552317 238552462 -14704121 - MIR SINE MIR -74 188 39 312 306 24 47 chr2 238552502 238552672 -14703911 - L2 LINE L2 -19 3294 3129 195 372 58 0 chr2 238552733 238552854 -14703729 - L2 LINE L2 -385 2929 2802 550 244 138 22 chr2 238552867 238553092 -14703491 - MER5C DNA MER1_type -4 320 70 203 314 169 0 chr2 238553214 238553332 -14703251 - L2 LINE L2 -605 2709 2572 1764 224 96 24 chr2 238553343 238553918 -14702665 + MLT1E2 LTR MaLR 11 626 0 585 321 98 53 chr2 238553919 238554448 -14702135 - L2 LINE L2 -731 2583 2031 1570 218 55 34 chr2 238554462 238554957 -14701626 - MLT1D LTR MaLR 0 505 1 2250 129 18 34 chr2 238555526 238555907 -14700676 + THE1C LTR MaLR 1 375 0 627 171 39 50 chr2 238556463 238556644 -14699939 - MER53 DNA DNA 0 189 11 381 340 64 10 chr2 238557219 238557422 -14699161 - L2 LINE L2 -352 2962 2749 373 0 36 0 chr2 238557435 238557490 -14699093 + L1MA7 LINE L1 6233 6289 -2 258 32 0 0 chr2 238558320 238558351 -14698232 + (TG)n Simple_repeat Simple_repeat 1 31 0 418 341 46 0 chr2 238559803 238559976 -14696607 - MIR SINE MIR -29 233 53 186 245 19 19 chr2 238560901 238560954 -14695629 + L2 LINE L2 3215 3267 -5 8875 34 0 19 chr2 238561097 238562976 -14693607 - L1PA4 LINE L1 -13 6142 4286 355 345 86 0 chr2 238563348 238563545 -14693038 - MIR SINE MIR -2 260 47 222 264 28 0 chr2 238564228 238564300 -14692283 + MIR SINE MIR 125 198 -64 7044 160 39 33 chr2 238565332 238566775 -14689808 - L1P LINE L1 -4685 1461 11 468 0 0 0 chr2 238566826 238566878 -14689705 + (TG)n Simple_repeat Simple_repeat 1 52 0 317 296 60 19 chr2 238566889 238567156 -14689427 - L1MEd LINE L1 -4921 1198 921 21 0 0 0 chr2 238567172 238567193 -14689390 + AT_rich Low_complexity Low_complexity 1 21 0 3026 171 9 12 chr2 238568255 238568817 -14687766 - L1PA16 LINE L1 0 6166 5607 5224 211 6 16 chr2 238568850 238570122 -14686461 - L1 LINE L1 -1052 5094 3835 2137 92 0 0 chr2 238570122 238570416 -14686167 - THE1B LTR MaLR 0 364 71 965 89 0 0 chr2 238570416 238570551 -14686032 + THE1-int LTR MaLR 1343 1477 -103 469 92 0 0 chr2 238570616 238570681 -14685902 - THE1B LTR MaLR -299 65 1 10533 104 44 9 chr2 238570685 238572207 -14684376 - THE1B-int LTR MaLR -4 1576 2 2054 107 7 0 chr2 238572208 238572497 -14684086 - THE1B LTR MaLR 0 364 74 3930 156 34 44 chr2 238572497 238573489 -14683094 - MER11C LTR ERVK 0 1071 1 461 120 27 0 chr2 238573489 238573564 -14683019 - THE1B LTR MaLR -287 77 1 6685 253 23 14 chr2 238573564 238576650 -14679933 - L1PA13 LINE L1 -2307 5277 2195 352 296 14 46 chr2 238576878 238577070 -14679513 - L1PA13 LINE L1 -5259 2315 2083 602 285 25 30 chr2 238577289 238577524 -14679059 - L1PA13 LINE L1 -6348 1226 993 303 315 167 33 chr2 238577619 238578009 -14678574 - L1 LINE L1 -801 5345 4904 2229 116 0 3 chr2 238578288 238578591 -14677992 - AluSg SINE Alu -8 302 1 357 250 21 107 chr2 238578915 238579055 -14677528 + MIR SINE MIR 10 137 -125 315 274 133 26 chr2 238580179 238580292 -14676291 - MIR SINE MIR -115 147 23 2322 109 3 0 chr2 238580646 238580958 -14675625 + AluSq SINE Alu 1 313 0 381 86 0 0 chr2 238581234 238581292 -14675291 + (CA)n Simple_repeat Simple_repeat 2 59 0 2810 96 3 0 chr2 238582176 238582550 -14674033 + THE1C LTR MaLR 1 375 0 416 267 103 20 chr2 238582689 238582835 -14673748 - MIR SINE MIR -56 206 49 377 319 190 19 chr2 238582898 238583114 -14673469 + MIR SINE MIR 2 254 -8 218 304 13 38 chr2 238584653 238584811 -14671772 + CT-rich Low_complexity Low_complexity 3 156 0 33 25 0 0 chr2 238586219 238586259 -14670324 + AT_rich Low_complexity Low_complexity 1 40 0 722 181 66 48 chr2 238586350 238586516 -14670067 - FAM SINE Alu -6 169 1 755 169 0 0 chr2 238586528 238586664 -14669919 + L1MB7 LINE L1 6049 6184 0 773 295 170 0 chr2 238586682 238587018 -14669565 + L2 LINE L2 2508 2900 -414 305 243 0 107 chr2 238587116 238587219 -14669364 + L1MC4 LINE L1 6612 6703 -1339 415 275 86 52 chr2 238587303 238587370 -14669213 + HAL1 LINE L1 2105 2168 -339 2250 79 0 3 chr2 238587370 238587661 -14668922 + AluY SINE Alu 15 304 -7 415 275 86 52 chr2 238587661 238587862 -14668721 + HAL1 LINE L1 2168 2382 -125 1244 88 41 10 chr2 238588338 238588532 -14668051 + L1MA1 LINE L1 6099 6298 -4 377 368 6 18 chr2 238588553 238588719 -14667864 - MER5B DNA MER1_type -11 167 4 247 321 30 61 chr2 238589112 238589243 -14667340 + MIR SINE MIR 18 144 -64 501 203 183 7 chr2 238590705 238590858 -14665725 - MER53 DNA DNA -1 188 9 32 57 0 0 chr2 238591360 238591413 -14665170 + AT_rich Low_complexity Low_complexity 1 53 0 754 189 115 49 chr2 238591879 238592122 -14664461 - L1MD3 LINE L1 0 7995 7737 601 190 5 42 chr2 238592139 238592343 -14664240 - MER52A LTR ERV1 -589 1166 829 237 62 0 0 chr2 238592343 238592375 -14664208 - MER52A LTR ERV1 -895 860 829 210 37 0 0 chr2 238592391 238592418 -14664165 + (TAGA)n Simple_repeat Simple_repeat 4 30 0 1570 175 32 11 chr2 238592419 238592699 -14663884 - MLT2B3 LTR ERVL -46 508 223 341 121 0 30 chr2 238592708 238592774 -14663809 + (GGGAGA)n Simple_repeat Simple_repeat 1 64 0 1303 189 4 4 chr2 238592775 238593008 -14663575 - MLT2B3 LTR ERVL -321 233 1 194 317 173 0 chr2 238594163 238594267 -14662316 + L2 LINE L2 3151 3272 0 42080 38 21 2 chr2 238595382 238601419 -14655164 - L1PA2 LINE L1 0 6155 5 611 306 30 42 chr2 238602210 238602543 -14654040 + L1ME LINE L1 19 347 -5723 463 287 35 17 chr2 238602543 238602717 -14653866 - L1MEc LINE L1 -5909 487 311 499 263 0 22 chr2 238602725 238602862 -14653721 - L1MEc LINE L1 -6129 267 134 1757 282 99 8 chr2 238602868 238602963 -14653620 - L1MCc LINE L1 -4891 1532 1447 189 74 0 0 chr2 238602963 238602990 -14653593 + (TG)n Simple_repeat Simple_repeat 2 28 0 1757 282 99 8 chr2 238602990 238603778 -14652805 - L1MCc LINE L1 -4976 1447 806 720 258 30 48 chr2 238603951 238604008 -14652575 - L1MCc LINE L1 -6143 280 223 2536 107 6 8 chr2 238604008 238604373 -14652210 + THE1B LTR MaLR 1 364 0 720 258 30 48 chr2 238604373 238604583 -14652000 - L1MCc LINE L1 -6200 223 18 1128 278 100 20 chr2 238604603 238605254 -14651329 - L1M4 LINE L1 -1721 4425 3723 271 94 19 19 chr2 238605468 238605521 -14651062 + (TC)n Simple_repeat Simple_repeat 1 53 0 1458 263 60 47 chr2 238605529 238606340 -14650243 - L1M4 LINE L1 -2873 3273 2452 1302 296 124 22 chr2 238606354 238606604 -14649979 - L2 LINE L2 -1363 1951 1728 266 50 25 0 chr2 238606604 238606644 -14649939 + (TG)n Simple_repeat Simple_repeat 2 42 0 1302 296 124 22 chr2 238606644 238607078 -14649505 - L2 LINE L2 -1586 1728 1197 2316 165 110 59 chr2 238609610 238610137 -14646446 + MLT2B3 LTR ERVL 1 554 0 613 183 15 89 chr2 238610854 238611056 -14645527 + MER53 DNA DNA 2 188 -1 297 301 55 14 chr2 238611503 238611649 -14644934 - L1MC4a LINE L1 -1919 5823 5672 1810 175 3 3 chr2 238611706 238612009 -14644574 + AluJb SINE Alu 1 303 -9 450 275 64 70 chr2 238612475 238612788 -14643795 - L1MC4a LINE L1 -2242 5500 5190 2178 54 41 10 chr2 238612840 238613134 -14643449 + MLT2A1 LTR ERVL 5 307 -137 332 269 15 39 chr2 238613166 238613296 -14643287 - L1MC4a LINE L1 -2268 3812 3686 1853 179 28 33 chr2 238613301 238613693 -14642890 - MLT1B LTR MaLR 0 390 1 587 140 18 0 chr2 238613740 238613854 -14642729 + CT-rich Low_complexity Low_complexity 1 116 0 3457 267 28 31 chr2 238613854 238615221 -14641362 - L1MC4a LINE L1 -2454 3626 2265 349 325 70 49 chr2 238615240 238615483 -14641100 - L1MC/D LINE L1 -2255 5553 5306 232 59 0 0 chr2 238615518 238615552 -14641031 - L1MA3 LINE L1 0 6305 6272 7293 41 4 0 chr2 238615924 238617360 -14639223 - L1PA5 LINE L1 -5 6149 4708 214 328 78 0 chr2 238620245 238620309 -14636274 + MIR SINE MIR 33 101 -107 467 174 46 108 chr2 238620554 238620749 -14635834 - LTR33A LTR ERVL 0 523 341 260 310 35 0 chr2 238620859 238620946 -14635637 - LTR33 LTR ERVL -343 178 89 218 189 0 19 chr2 238621312 238621365 -14635218 + (TA)n Simple_repeat Simple_repeat 1 52 0 200 394 0 39 chr2 238621491 238621595 -14634988 + MER5A DNA MER1_type 60 159 -30 225 250 0 76 chr2 238621595 238621687 -14634896 - LTR33A LTR ERVL -6 517 433 1359 216 59 22 chr2 238621731 238622102 -14634481 + MLT1B LTR MaLR 1 385 -5 206 347 13 0 chr2 238623164 238623239 -14633344 + MIR3 SINE MIR 110 185 -23 555 214 22 18 chr2 238623338 238623504 -14633079 - L1ME3A LINE L1 -8 6156 5984 330 287 49 18 chr2 238623503 238623667 -14632916 + L1M4 LINE L1 2327 2495 -3651 * 397 351 20 50 chr2 238623665 238623967 -14632616 - L1MC4a LINE L1 -5772 298 6 1058 285 45 30 chr2 238623970 238624644 -14631939 - L1M4 LINE L1 -1669 4477 3794 308 299 40 36 chr2 238624799 238624887 -14631696 - L1M4c LINE L1 -4839 1724 1638 225 65 0 0 chr2 238624887 238624918 -14631665 + (TG)n Simple_repeat Simple_repeat 2 32 0 308 299 40 36 chr2 238624918 238625107 -14631476 - L1M4c LINE L1 -4925 1638 1297 1958 179 2 72 chr2 238625257 238625671 -14630912 + MLT1B LTR MaLR 1 385 -5 1576 149 80 44 chr2 238625955 238626317 -14630266 + THE1C LTR MaLR 1 375 0 659 266 16 27 chr2 238627128 238627316 -14629267 - MIR SINE MIR -74 188 3 314 294 12 0 chr2 238627346 238627431 -14629152 + L1MC4 LINE L1 6615 6700 -1342 377 64 51 0 chr2 238627949 238628027 -14628556 + (TA)n Simple_repeat Simple_repeat 2 83 0 1476 169 12 0 chr2 238628067 238628315 -14628268 - AluJb SINE Alu -61 251 1 865 260 36 0 chr2 238628949 238629230 -14627353 - L1M4 LINE L1 -2277 3869 3579 3845 138 32 11 chr2 238629238 238629895 -14626688 - L1PA16 LINE L1 -4 6162 5492 580 192 42 8 chr2 238630103 238630223 -14626360 - FLAM_C SINE Alu -19 124 1 5349 128 31 2 chr2 238630361 238631716 -14624867 - L1PA15 LINE L1 0 6816 5413 10367 226 64 15 chr2 238631717 238636502 -14620081 - L1PA15 LINE L1 -1759 5038 1 2363 101 0 0 chr2 238636887 238637194 -14619389 - AluSg SINE Alu -3 307 1 191 122 0 24 chr2 238637362 238637403 -14619180 + (TTTTTA)n Simple_repeat Simple_repeat 2 41 0 436 244 64 68 chr2 238637998 238638264 -14618319 + HAL1 LINE L1 2243 2507 0 1052 146 84 0 chr2 238638283 238638461 -14618122 + AluSx SINE Alu 1 193 -119 3663 88 8 21 chr2 238638462 238638976 -14617607 - HERVL LTR ERVL -408 5246 4740 1989 182 17 20 chr2 238639800 238639817 -14616766 - MLT2D LTR ERVL -13 502 486 333 0 0 0 chr2 238639817 238639854 -14616729 + (TG)n Simple_repeat Simple_repeat 1 37 0 1989 182 17 20 chr2 238639854 238640244 -14616339 - MLT2D LTR ERVL -29 486 1 2025 172 24 12 chr2 238641214 238641639 -14614944 - L1MA9 LINE L1 -5 6307 5878 246 62 0 0 chr2 238641730 238641762 -14614821 + (TG)n Simple_repeat Simple_repeat 1 32 0 216 0 0 0 chr2 238641761 238641785 -14614798 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 2392 88 0 25 chr2 238643577 238643896 -14612687 - AluY SINE Alu 0 311 1 256 301 184 0 chr2 238643912 238644015 -14612568 + L2 LINE L2 3192 3313 0 510 197 96 115 chr2 238644143 238644404 -14612179 + MLT1E2 LTR MaLR 4 234 -392 4268 149 29 10 chr2 238644462 238645159 -14611424 - MER50 LTR ERV1 -24 710 1 1051 224 15 45 chr2 238645159 238645423 -14611160 + MLT1E2 LTR MaLR 267 522 -104 977 303 107 74 chr2 238645764 238646655 -14609928 + L2 LINE L2 2261 3198 -115 3089 202 29 13 chr2 238646655 238647349 -14609234 + MER67C LTR ERV1 3 707 -3 977 303 107 74 chr2 238647349 238647452 -14609131 + L2 LINE L2 3198 3296 -17 1773 124 18 18 chr2 238647874 238648148 -14608435 + AluSx SINE Alu 32 305 -7 2865 174 12 69 chr2 238648321 238648438 -14608145 - LTR9 LTR ERV1 0 612 490 1849 121 3 91 chr2 238648438 238648777 -14607806 + AluSg SINE Alu 1 309 -1 2865 174 12 69 chr2 238648777 238649308 -14607275 - LTR9 LTR ERV1 -122 490 1 461 283 53 53 chr2 238650208 238650455 -14606128 + MIR SINE MIR 7 253 -9 363 267 121 46 chr2 238650791 238651098 -14605485 - HAL1 LINE L1 -924 1583 1254 365 293 20 7 chr2 238651111 238651261 -14605322 - L1ME LINE L1 -430 5691 5540 384 274 8 40 chr2 238652350 238652474 -14604109 + LTR33 LTR ERVL 395 514 -7 24 32 0 0 chr2 238652633 238652664 -14603919 + AT_rich Low_complexity Low_complexity 1 31 0 1144 126 0 6 chr2 238653551 238653710 -14602873 - AluSp SINE Alu -22 291 134 2289 105 0 0 chr2 238653710 238654005 -14602578 - AluY SINE Alu -16 295 1 22 35 0 0 chr2 238654059 238654088 -14602495 + AT_rich Low_complexity Low_complexity 1 29 0 424 207 17 49 chr2 238654460 238654773 -14601810 + (CACCAT)n Simple_repeat Simple_repeat 1 303 0 24 0 0 0 chr2 238655337 238655361 -14601222 + AT_rich Low_complexity Low_complexity 1 24 0 839 92 0 28 chr2 238655618 238655759 -14600824 + (TA)n Simple_repeat Simple_repeat 2 138 0 935 176 0 0 chr2 238655761 238655909 -14600674 - AluJb SINE Alu -34 278 131 258 213 27 0 chr2 238655912 238655987 -14600596 - L1MC4 LINE L1 -1351 6691 6615 778 157 0 8 chr2 238655987 238656108 -14600475 - FLAM_C SINE Alu -13 120 1 457 186 70 0 chr2 238656374 238656460 -14600123 + Charlie1 DNA MER1_type 1 92 -2669 1866 241 40 43 chr2 238656486 238656557 -14600026 + Charlie1 DNA MER1_type 1491 1561 -1200 10785 33 0 4 chr2 238656557 238658653 -14597930 - L1PA3 LINE L1 0 6155 4091 1866 241 40 43 chr2 238658653 238659232 -14597351 + Charlie1 DNA MER1_type 1561 2139 -622 192 40 0 0 chr2 238659315 238659340 -14597243 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 988 253 110 31 chr2 238659340 238659731 -14596852 - MER68 LTR ERV1 -140 422 1 2326 80 3 7 chr2 238659744 238660045 -14596538 + AluY SINE Alu 1 300 -11 2287 201 26 36 chr2 238660060 238660673 -14595910 + Charlie1 DNA MER1_type 2155 2761 0 390 310 38 29 chr2 238661001 238661256 -14595327 + L1MC/D LINE L1 5559 5829 -341 219 258 0 22 chr2 238661448 238661537 -14595046 + T-rich Low_complexity Low_complexity 6 92 0 310 339 17 17 chr2 238661687 238661802 -14594781 - MIR3 SINE MIR -90 118 4 713 298 71 0 chr2 238661873 238662111 -14594472 - MIR SINE MIR -3 259 5 1773 49 0 0 chr2 238662241 238662464 -14594119 - L1PA4 LINE L1 0 6155 5933 364 43 0 0 chr2 238662464 238662510 -14594073 + L1P3 LINE L1 5775 5820 -334 412 84 59 8 chr2 238662583 238662702 -14593881 + (TA)n Simple_repeat Simple_repeat 1 125 0 305 271 79 79 chr2 238662712 238662915 -14593668 - L1MC/D LINE L1 -1991 5817 5615 209 219 0 0 chr2 238664064 238664105 -14592478 + (TCTA)n Simple_repeat Simple_repeat 4 44 0 396 284 102 49 chr2 238664209 238664446 -14592137 - MIR SINE MIR -10 252 15 182 340 113 21 chr2 238664477 238664671 -14591912 - MIR SINE MIR -1 261 50 629 250 62 42 chr2 238666338 238666626 -14589957 + L1M4 LINE L1 2985 3278 -2868 468 0 0 0 chr2 238667108 238667160 -14589423 + (CA)n Simple_repeat Simple_repeat 1 52 0 470 150 279 14 chr2 238667765 238667912 -14588671 + L1MA7 LINE L1 6106 6291 0 1951 133 0 33 chr2 238668300 238668601 -14587982 + AluSx SINE Alu 1 291 -21 318 330 63 34 chr2 238668942 238669100 -14587483 - MIR SINE MIR -1 261 94 956 213 10 5 chr2 238669100 238669307 -14587276 - MER6B DNA MER2_type -1 209 2 318 330 63 34 chr2 238669307 238669354 -14587229 - MIR SINE MIR -168 94 50 468 0 0 0 chr2 238669887 238669939 -14586644 + (TATATG)n Simple_repeat Simple_repeat 3 54 0 1176 302 85 35 chr2 238670235 238671292 -14585291 + L1MCc LINE L1 1269 2609 -4513 1922 113 8 4 chr2 238671292 238671707 -14584876 + AluSq SINE Alu 18 433 0 1176 302 85 35 chr2 238671707 238671881 -14584702 + L1MCc LINE L1 2609 2773 -4349 26 30 0 0 chr2 238671881 238671914 -14584669 + AT_rich Low_complexity Low_complexity 1 33 0 1279 259 80 55 chr2 238672388 238672605 -14583978 + L1MCc LINE L1 2769 2979 -3962 1974 245 55 36 chr2 238672605 238673184 -14583399 + MLT1E LTR MaLR 2 591 -2 1279 259 80 55 chr2 238673184 238673249 -14583334 + L1MCc LINE L1 2979 3041 -3900 2666 34 0 0 chr2 238673249 238673571 -14583012 + L1PA4 LINE L1 5832 6153 -2 1279 259 80 55 chr2 238673571 238674228 -14582355 + L1MCc LINE L1 3041 3692 -3249 2172 182 77 0 chr2 238674232 238674700 -14581883 + L1MB7 LINE L1 5674 6177 -7 828 249 106 10 chr2 238674707 238675196 -14581387 + L1MCc LINE L1 3701 4236 -2705 484 266 16 82 chr2 238675334 238675578 -14581005 - L1MEd LINE L1 -4584 1812 1585 276 30 0 0 chr2 238675597 238675630 -14580953 + (TG)n Simple_repeat Simple_repeat 2 34 0 404 277 25 8 chr2 238675732 238675851 -14580732 - L2 LINE L2 -5 3308 3188 358 326 70 79 chr2 238676380 238676907 -14579676 - L1MEd LINE L1 -934 1642 1035 711 151 8 0 chr2 238676907 238677026 -14579557 + L1PB4 LINE L1 6031 6150 -6 358 326 70 79 chr2 238677026 238677075 -14579508 - L1MEd LINE L1 -1541 1035 987 318 26 0 0 chr2 238677096 238677135 -14579448 + (T)n Simple_repeat Simple_repeat 1 39 0 188 185 19 0 chr2 238677195 238677249 -14579334 + (TTGG)n Simple_repeat Simple_repeat 2 56 0 2264 121 0 0 chr2 238679496 238679803 -14576780 - AluSx SINE Alu -5 307 1 983 348 104 39 chr2 238679841 238680156 -14576427 - L2 LINE L2 0 3272 2979 186 43 0 0 chr2 238680156 238680179 -14576404 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 983 348 104 39 chr2 238680179 238680868 -14575715 - L2 LINE L2 -293 2979 2145 2024 112 3 60 chr2 238680868 238681199 -14575384 + AluSx SINE Alu 1 312 0 983 348 104 39 chr2 238681199 238681662 -14574921 - L2 LINE L2 -1127 2145 1714 3957 92 24 4 chr2 238682506 238683059 -14573524 - LTR6A LTR ERV1 0 564 1 742 264 6 28 chr2 238683576 238683758 -14572825 - MER45A DNA AcHobo 0 178 1 223 244 89 56 chr2 238683783 238683873 -14572710 + MIR SINE MIR 48 140 -68 194 280 20 0 chr2 238683882 238683932 -14572651 - L2 LINE L2 -13 3300 3250 270 0 0 0 chr2 238683947 238683977 -14572606 + (CA)n Simple_repeat Simple_repeat 1 30 0 399 335 54 20 chr2 238684233 238684436 -14572147 - MIR SINE MIR -21 241 32 213 203 51 0 chr2 238684745 238684804 -14571779 + (TCTA)n Simple_repeat Simple_repeat 1 62 0 24 53 0 0 chr2 238685020 238685058 -14571525 + AT_rich Low_complexity Low_complexity 1 38 0 6936 257 77 23 chr2 238685724 238687761 -14568822 + MER90-int LTR ERV1 1988 4135 -56 545 281 11 34 chr2 238688001 238688179 -14568404 - MER77 LTR ERV1 -9 596 423 1532 191 7 33 chr2 238688236 238688540 -14568043 + AluJo SINE Alu 1 296 -16 564 251 23 36 chr2 238688878 238689061 -14567522 + MER77 LTR ERV1 407 596 -9 366 42 0 0 chr2 238690883 238690931 -14565652 + (TG)n Simple_repeat Simple_repeat 1 48 0 745 162 7 29 chr2 238691001 238691137 -14565446 + AluJb SINE Alu 1 133 -179 2787 120 34 2 chr2 238692014 238692423 -14564160 - MSTA LTR MaLR 0 428 7 1912 227 38 84 chr2 238692606 238693245 -14563338 + MER90 LTR ERV1 1 609 -5 214 255 0 0 chr2 238693363 238693410 -14563173 + L2 LINE L2 3225 3271 -1 210 91 0 0 chr2 238693742 238693775 -14562808 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 901 127 0 0 chr2 238693776 238693894 -14562689 - AluSq/x SINE Alu -195 118 1 2097 166 2 47 chr2 238696289 238696716 -14559867 + L1M2 LINE L1 5270 5677 -614 707 254 102 53 chr2 238696862 238697410 -14559173 + L1ME LINE L1 939 1513 -5017 288 264 35 49 chr2 238697526 238697670 -14558913 + L1ME LINE L1 1726 1867 -4673 461 311 100 30 chr2 238697685 238697955 -14558628 - LTR16B LTR ERVL -110 354 66 2349 83 3 0 chr2 238698147 238698437 -14558146 + AluY SINE Alu 1 291 -20 452 266 53 30 chr2 238698463 238698632 -14557951 - MLT1H LTR MaLR -23 526 354 189 341 62 16 chr2 238699017 238699146 -14557437 - L3 LINE CR1 -826 751 617 5188 150 20 6 chr2 238699153 238700119 -14556464 + L1PB4 LINE L1 5172 6149 -7 53 49 0 0 chr2 238701113 238701194 -14555389 + AT_rich Low_complexity Low_complexity 1 81 0 273 265 96 0 chr2 238701496 238701579 -14555004 - MIR SINE MIR -43 219 129 21 0 0 0 chr2 238702891 238702912 -14553671 + AT_rich Low_complexity Low_complexity 1 21 0 586 273 200 17 chr2 238703064 238703409 -14553174 - L2 LINE L2 -1 3312 2905 1292 251 61 44 chr2 238705071 238705401 -14551182 + MLT1D LTR MaLR 1 343 -162 3543 113 9 15 chr2 238705401 238705931 -14550652 + MER1A DNA MER1_type 1 527 0 1292 251 61 44 chr2 238705931 238706095 -14550488 + MLT1D LTR MaLR 343 503 -2 2198 123 0 0 chr2 238706147 238706448 -14550135 + AluSq SINE Alu 1 301 -12 460 306 61 11 chr2 238706576 238706756 -14549827 - MIR SINE MIR -6 256 68 621 113 21 10 chr2 238706807 238706904 -14549679 + MER4A LTR ERV1 1 98 -566 1788 146 6 27 chr2 238706904 238707257 -14549326 + MER4A LTR ERV1 261 664 0 2540 161 42 18 chr2 238707260 238707809 -14548774 + MER4A-int LTR ERV1 1 686 -5912 1175 249 61 3 chr2 238707957 238708250 -14548333 + MER4A-int LTR ERV1 1852 2161 -4170 5742 130 79 5 chr2 238708320 238708853 -14547730 + MER4B-int LTR ERV1 199 691 -6067 333 0 0 0 chr2 238708853 238708890 -14547693 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 5742 130 79 5 chr2 238708890 238709296 -14547287 + MER4B-int LTR ERV1 691 1189 -5569 2999 99 103 8 chr2 238709326 238709368 -14547215 + MER4B-int LTR ERV1 1912 1949 -4649 2054 155 0 3 chr2 238709368 238709678 -14546905 + AluSx SINE Alu 1 309 -3 2999 99 103 8 chr2 238709678 238710168 -14546415 + MER4B-int LTR ERV1 1949 2495 -4103 1183 133 156 13 chr2 238710168 238710393 -14546190 - LTR8 LTR ERV1 -434 257 1 1785 95 16 13 chr2 238710393 238710710 -14545873 + MER4B-int LTR ERV1 2737 3054 -3544 666 200 0 8 chr2 238710717 238710837 -14545746 + THE1B LTR MaLR 246 364 0 811 160 32 13 chr2 238710837 238711032 -14545551 + MER4A-int LTR ERV1 2038 4329 -551 15688 114 46 17 chr2 238711034 238713673 -14542910 + MER4A-int LTR ERV1 3881 6596 -2 581 115 31 10 chr2 238713681 238713777 -14542806 + MER4A LTR ERV1 1 98 -566 1732 128 14 75 chr2 238713777 238714145 -14542438 + MER4A LTR ERV1 261 664 0 377 313 102 25 chr2 238714510 238714785 -14541798 + L1M4 LINE L1 4589 4884 -1262 196 318 143 60 chr2 238714843 238714952 -14541631 + L2 LINE L2 2874 2972 -341 1710 168 30 10 chr2 238714952 238715250 -14541333 - AluJb SINE Alu -8 304 1 196 318 143 60 chr2 238715250 238715392 -14541191 + L2 LINE L2 2972 3146 -167 193 280 0 0 chr2 238715419 238715469 -14541114 + L2 LINE L2 3263 3312 -1 490 315 99 69 chr2 238715892 238716782 -14539801 - L2 LINE L2 0 3313 2383 450 279 134 25 chr2 238717127 238717328 -14539255 - MIR SINE MIR -12 250 28 346 374 41 0 chr2 238717579 238717750 -14538833 + L2 LINE L2 1328 1505 -1809 330 194 56 9 chr2 238717817 238717925 -14538658 + (TG)n Simple_repeat Simple_repeat 1 113 0 445 333 100 0 chr2 238717945 238718155 -14538428 - L2 LINE L2 -2032 1282 1052 559 256 174 37 chr2 238718217 238718568 -14538015 + L2 LINE L2 2834 3232 -81 1015 272 162 9 chr2 238718647 238719172 -14537411 - L2 LINE L2 -2244 1070 466 21 36 0 0 chr2 238719398 238719426 -14537157 + AT_rich Low_complexity Low_complexity 1 28 0 267 169 17 0 chr2 238719426 238719485 -14537098 + L1ME4a LINE L1 6056 6115 -6 26 74 0 0 chr2 238720097 238720151 -14536432 + AT_rich Low_complexity Low_complexity 1 54 0 660 208 60 0 chr2 238720779 238720928 -14535655 - L1MA10 LINE L1 -3 6331 6174 1709 176 27 0 chr2 238721854 238722150 -14534433 - MLT1A1 LTR MaLR -61 304 1 250 259 49 0 chr2 238722243 238722324 -14534259 + MER67D LTR ERV1 1 85 -429 1371 209 51 42 chr2 238722366 238722570 -14534013 + MER67C LTR ERV1 72 282 -428 2182 180 39 10 chr2 238722570 238722986 -14533597 + MSTA LTR MaLR 1 428 0 1371 209 51 42 chr2 238722986 238723116 -14533467 + MER67C LTR ERV1 282 409 -301 3476 103 41 84 chr2 238724685 238725314 -14531269 - LTR43 LTR ERV1 0 602 1 180 0 0 0 chr2 238725555 238725575 -14531008 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 1650 199 68 8 chr2 238725769 238726120 -14530463 + MSTA LTR MaLR 1 372 -56 2058 107 55 0 chr2 238726125 238726565 -14530018 - AluSc SINE Alu 0 456 1 450 69 0 0 chr2 238726573 238726631 -14529952 + MSTA LTR MaLR 371 428 0 * 1586 214 53 59 chr2 238726631 238727100 -14529483 + MLT1D LTR MaLR 40 505 0 216 0 0 0 chr2 238727114 238727138 -14529445 + (TG)n Simple_repeat Simple_repeat 1 24 0 244 192 0 0 chr2 238727337 238727389 -14529194 - Alu SINE Alu 0 302 251 971 128 0 34 chr2 238727389 238727537 -14529046 - AluJo SINE Alu -164 148 6 538 314 38 11 chr2 238728271 238728456 -14528127 - LTR33A LTR ERVL -330 193 4 1299 205 38 126 chr2 238729320 238729451 -14527132 + MLT1E2 LTR MaLR 1 142 -512 2246 110 0 25 chr2 238729451 238729770 -14526813 + AluSq SINE Alu 3 313 0 1299 205 38 126 chr2 238729770 238730145 -14526438 + MLT1E2 LTR MaLR 142 492 -162 2307 101 3 0 chr2 238731238 238731546 -14525037 + AluSp SINE Alu 1 309 -4 816 267 49 32 chr2 238732182 238732467 -14524116 + MER110 LTR ERV1 166 455 -36 302 311 0 0 chr2 238732569 238732672 -14523911 + L2 LINE L2 2517 2619 -695 1522 167 0 43 chr2 238732728 238733010 -14523573 - AluJo SINE Alu -15 297 28 426 314 117 31 chr2 238733238 238733691 -14522892 - HAL1 LINE L1 -593 1914 1423 1227 175 52 10 chr2 238734054 238734356 -14522227 - MER33 DNA MER1_type -5 319 1 295 138 169 0 chr2 238734874 238734939 -14521644 + MER5A DNA MER1_type 1 76 -113 2333 102 0 6 chr2 238734939 238735254 -14521329 + AluSp SINE Alu 1 313 0 327 252 101 50 chr2 238735298 238735417 -14521166 + MER5A DNA MER1_type 63 187 -2 2031 125 58 19 chr2 238737198 238737558 -14519025 - THE1C LTR MaLR -1 374 1 424 283 142 34 chr2 238737957 238738162 -14518421 - MIR SINE MIR -17 245 19 24 53 0 0 chr2 238739107 238739145 -14517438 + AT_rich Low_complexity Low_complexity 1 38 0 451 321 32 43 chr2 238739403 238739590 -14516993 - MIR SINE MIR -46 216 32 288 235 29 0 chr2 238739862 238739930 -14516653 + CT-rich Low_complexity Low_complexity 3 72 0 670 336 110 55 chr2 238739957 238741329 -14515254 - L2 LINE L2 -32 3281 1836 2217 218 9 0 chr2 238741339 238741806 -14514777 + L1MB8 LINE L1 5374 5844 -334 525 143 38 38 chr2 238742027 238742160 -14514423 - AluSq/x SINE Alu -179 133 1 476 134 0 126 chr2 238742162 238742225 -14514358 + L1MD2 LINE L1 6228 6269 -90 1687 178 33 18 chr2 238742225 238742557 -14514026 - MER1B DNA MER1_type 0 337 1 476 134 0 126 chr2 238742557 238742620 -14513963 + L1MD2 LINE L1 6269 6338 -21 834 207 141 15 chr2 238742648 238743034 -14513549 - L1MC/D LINE L1 -763 5383 5053 666 275 25 0 chr2 238743034 238743234 -14513349 + L1ME2 LINE L1 5486 5690 -476 2512 135 32 28 chr2 238743239 238743675 -14512908 + MER65A LTR ERV1 6 443 -2 1489 200 63 48 chr2 238743682 238744155 -14512428 + L1ME2 LINE L1 5695 6332 -2 253 300 74 74 chr2 238744188 238744580 -14512003 + L1MCc LINE L1 485 909 -5514 22 35 0 0 chr2 238745034 238745063 -14511520 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 238745139 238745161 -14511422 + AT_rich Low_complexity Low_complexity 1 22 0 188 304 61 70 chr2 238745170 238745285 -14511298 + L3b LINE CR1 1411 1524 -59 476 250 145 0 chr2 238745846 238746018 -14510565 - MIR SINE MIR 0 262 66 184 208 21 21 chr2 238746624 238746672 -14509911 + L2 LINE L2 3261 3308 -5 1561 242 111 2 chr2 238746689 238747113 -14509470 + MLT2B1 LTR ERVL 3 484 -36 429 36 0 0 chr2 238747113 238747168 -14509415 + (CA)n Simple_repeat Simple_repeat 2 56 0 1561 242 111 2 chr2 238747168 238747210 -14509373 + MLT2B1 LTR ERVL 484 520 0 1039 349 45 19 chr2 238747261 238747843 -14508740 + L3 LINE CR1 419 1015 -562 459 244 22 22 chr2 238747853 238747988 -14508595 + MER5A DNA MER1_type 32 166 -23 318 95 0 0 chr2 238749493 238749535 -14507048 + 5S rRNA rRNA 1 42 -79 2171 114 0 26 chr2 238749622 238749929 -14506654 - AluSx SINE Alu -13 299 1 791 216 134 0 chr2 238750368 238750562 -14506021 - MER58A DNA MER1_type -1 223 4 820 129 53 0 chr2 238750705 238750837 -14505746 - L1MC2 LINE L1 -193 6151 6013 570 218 22 22 chr2 238750844 238751027 -14505556 - L1PA15-16 LINE L1 -3827 3022 2837 608 126 16 118 chr2 238751069 238751114 -14505469 - MSTA LTR MaLR -2 426 378 2379 77 3 0 chr2 238751114 238751413 -14505170 + AluY SINE Alu 1 300 -11 608 126 16 118 chr2 238751413 238751494 -14505089 - MSTA LTR MaLR -50 378 313 509 237 106 34 chr2 238751771 238752007 -14504576 + MER5C DNA MER1_type 1 253 -71 2392 82 0 13 chr2 238752036 238752351 -14504232 - AluY SINE Alu 0 311 1 647 291 30 7 chr2 238752865 238753160 -14503423 + L1 LINE L1 3120 3421 -2725 1049 121 69 0 chr2 238753160 238753333 -14503250 - MSTA LTR MaLR -243 185 1 925 171 7 0 chr2 238753333 238753479 -14503104 + MLT1C LTR MaLR 321 467 0 1179 348 89 17 chr2 238753509 238754851 -14501732 - ERVL LTR ERVL -941 4823 3349 182 360 166 23 chr2 238754990 238755165 -14501418 + L2 LINE L2 2653 2852 -462 261 345 0 0 chr2 238755189 238755276 -14501307 - MIR SINE MIR -3 259 173 779 228 55 6 chr2 238755287 238755587 -14500996 + MLT2D LTR ERVL 1 414 0 312 319 146 21 chr2 238755587 238755731 -14500852 - MIR SINE MIR -99 163 2 24 53 0 0 chr2 238756256 238756294 -14500289 + AT_rich Low_complexity Low_complexity 1 38 0 874 235 26 22 chr2 238756781 238757011 -14499572 + MLT1H LTR MaLR 3 233 -316 1800 151 18 0 chr2 238757310 238757589 -14498994 + AluSq SINE Alu 12 295 -18 258 253 53 13 chr2 238758425 238758500 -14498083 + MLT1J LTR MaLR 238 315 -196 242 275 37 37 chr2 238758539 238758648 -14497935 + MLT1L LTR MaLR 507 615 0 23 0 0 0 chr2 238758875 238758898 -14497685 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr2 238759057 238759081 -14497502 + AT_rich Low_complexity Low_complexity 1 24 0 39 0 0 0 chr2 238759455 238759494 -14497089 + AT_rich Low_complexity Low_complexity 1 39 0 1343 38 0 0 chr2 238759494 238759654 -14496929 - L1PA3 LINE L1 -3 6152 5993 11515 26 84 15 chr2 238759659 238761146 -14495437 + L1P LINE L1 3644 5233 -913 462 301 29 0 chr2 238761741 238761877 -14494706 + L1MEd LINE L1 600 739 -5466 651 288 86 65 chr2 238762329 238762995 -14493588 + L1MEd LINE L1 1075 1754 -4642 837 283 108 36 chr2 238763137 238763937 -14492646 + L1MEd LINE L1 2204 3060 -3155 365 299 79 11 chr2 238764576 238764753 -14491830 + MIR SINE MIR 63 251 -11 1921 58 17 0 chr2 238765080 238765363 -14491220 + AluY SINE Alu 39 325 0 465 240 48 0 chr2 238766047 238766172 -14490411 + MER94 DNA DNA 1 131 -3 528 311 24 30 chr2 238766294 238766461 -14490122 + MIR SINE MIR 28 193 -69 278 244 93 0 chr2 238766492 238766578 -14490005 - MLT1I LTR MaLR -27 382 289 1107 141 0 80 chr2 238767446 238767512 -14489071 + MER4D LTR ERV1 3 73 -830 2494 49 10 3 chr2 238767512 238767820 -14488763 - AluY SINE Alu -1 310 1 1107 141 0 80 chr2 238767820 238767966 -14488617 + MER4D LTR ERV1 73 198 -705 435 294 9 0 chr2 238768605 238768714 -14487869 + MER97c DNA MER1_type? 1 110 -980 1283 178 4 12 chr2 238769244 238769485 -14487098 + MER96B DNA MER1_type? 1 239 -178 622 332 17 59 chr2 238769541 238769610 -14486973 - L2 LINE L2 -253 3060 2990 2069 96 3 77 chr2 238769610 238769923 -14486660 + AluSx SINE Alu 2 291 -21 622 332 17 59 chr2 238769923 238770294 -14486289 - L2 LINE L2 -323 2990 2637 397 222 0 22 chr2 238770458 238770548 -14486035 + MER21B LTR ERV1 3 90 -773 2908 239 55 17 chr2 238770570 238771335 -14485248 + MER21B LTR ERV1 19 812 -51 204 291 35 35 chr2 238771365 238771451 -14485132 - L2 LINE L2 -2033 1281 1196 1370 202 3 63 chr2 238771636 238772007 -14484576 + MLT2D LTR ERVL 1 332 -82 1192 243 89 68 chr2 238772129 238772569 -14484014 + MLT2B3 LTR ERVL 106 554 0 720 0 31 10 chr2 238772601 238772697 -14483886 + (TAGA)n Simple_repeat Simple_repeat 1 98 0 199 218 77 64 chr2 238773039 238773117 -14483466 - MIR SINE MIR -71 191 113 1082 201 129 0 chr2 238774259 238774523 -14482060 + L1MD2 LINE L1 5937 6126 -116 1873 149 23 16 chr2 238774536 238774844 -14481739 - AluSx SINE Alu 0 312 3 23 0 0 0 chr2 238775489 238775512 -14481071 + AT_rich Low_complexity Low_complexity 1 23 0 2108 93 0 0 chr2 238775862 238776132 -14480451 + AluY SINE Alu 39 308 -3 214 357 56 8 chr2 238776398 238776524 -14480059 - MIR SINE MIR -55 207 76 328 345 51 20 chr2 238776856 238777111 -14479472 - MARNA DNA Mariner -191 395 133 245 278 31 26 chr2 238777238 238777374 -14479209 + L1ME LINE L1 5641 5779 -372 29 47 0 0 chr2 238777422 238777465 -14479118 + AT_rich Low_complexity Low_complexity 1 43 0 302 247 49 0 chr2 238778249 238778330 -14478253 - MIR SINE MIR -41 221 137 1989 128 6 41 chr2 238778551 238778871 -14477712 + AluSc SINE Alu 1 309 0 21 36 0 0 chr2 238779027 238779055 -14477528 + AT_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr2 238779227 238779249 -14477334 + (CA)n Simple_repeat Simple_repeat 2 23 0 195 42 0 0 chr2 238779249 238779273 -14477310 + (GA)n Simple_repeat Simple_repeat 1 24 0 2045 128 3 13 chr2 238780201 238780506 -14476077 + AluSx SINE Alu 5 306 -6 42379 37 22 2 chr2 238781212 238787238 -14469345 + L1PA2 LINE L1 1 6152 -3 180 278 78 52 chr2 238787714 238787829 -14468754 + L3b LINE CR1 1287 1404 -179 23 0 0 0 chr2 238788468 238788491 -14468092 + AT_rich Low_complexity Low_complexity 1 23 0 31 0 0 0 chr2 238788633 238788664 -14467919 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr2 238788717 238788746 -14467837 + AT_rich Low_complexity Low_complexity 1 29 0 2273 52 52 0 chr2 238790451 238790738 -14465845 + AluY SINE Alu 1 302 -9 234 0 0 0 chr2 238791234 238791260 -14465323 + (TG)n Simple_repeat Simple_repeat 2 27 0 2363 103 0 0 chr2 238791529 238791829 -14464754 - AluSx SINE Alu -12 300 1 1070 192 16 90 chr2 238791986 238792309 -14464274 - L1MA9 LINE L1 -5 6307 6009 435 285 50 41 chr2 238792535 238792756 -14463827 - HAL1 LINE L1 -1215 1292 1070 357 251 43 49 chr2 238792786 238792949 -14463634 - L2 LINE L2 0 3313 3152 314 211 30 128 chr2 238793156 238793289 -14463294 - L1MEd LINE L1 -5186 933 814 270 291 54 34 chr2 238794212 238794360 -14462223 - HAL1 LINE L1 -854 1653 1503 400 351 37 43 chr2 238794481 238794806 -14461777 - L1MEd LINE L1 -4883 1236 914 835 332 40 16 chr2 238794897 238795270 -14461313 + LTR16C LTR ERVL 104 485 -6 2413 103 27 8 chr2 238795887 238796255 -14460328 - THE1C LTR MaLR 0 375 1 216 143 0 0 chr2 238796260 238796302 -14460281 + (TC)n Simple_repeat Simple_repeat 2 43 0 21 36 0 0 chr2 238797490 238797518 -14459065 + AT_rich Low_complexity Low_complexity 1 28 0 32 0 0 0 chr2 238798063 238798095 -14458488 + AT_rich Low_complexity Low_complexity 1 32 0 475 0 0 0 chr2 238798107 238798160 -14458423 + L1P1 LINE L1 5763 5815 -340 401 192 0 0 chr2 238798211 238798289 -14458294 + MER67D LTR ERV1 1 78 -436 1529 169 94 7 chr2 238798339 238798647 -14457936 + MER67C LTR ERV1 68 402 -308 2314 76 0 3 chr2 238798682 238798973 -14457610 + AluSq SINE Alu 1 290 -23 249 305 105 0 chr2 238799000 238799105 -14457478 + MER67D LTR ERV1 371 486 -28 766 68 0 0 chr2 238799320 238799423 -14457160 - AluSp/q SINE Alu -2 311 209 461 275 156 6 chr2 238799551 238799711 -14456872 + MIR3 SINE MIR 24 207 -1 22 56 0 0 chr2 238800464 238800500 -14456083 + AT_rich Low_complexity Low_complexity 1 36 0 2428 47 40 0 chr2 238800973 238801272 -14455311 - AluY SINE Alu 0 311 1 713 241 15 25 chr2 238801334 238801537 -14455046 - L1MB8 LINE L1 0 6178 5978 1927 126 6 19 chr2 238801758 238802106 -14454477 - MER4A LTR ERV1 0 664 263 588 162 0 10 chr2 238802106 238802205 -14454378 - MER4A LTR ERV1 -566 98 1 312 346 8 31 chr2 238802659 238802789 -14453794 - MER5A DNA MER1_type -45 144 18 698 218 12 18 chr2 238803451 238803621 -14452962 - MLT1B LTR MaLR -42 348 180 296 202 6 0 chr2 238803660 238803728 -14452855 - L1MB1 LINE L1 -2 6166 6114 601 223 78 57 chr2 238803758 238803867 -14452716 + MLT1D LTR MaLR 1 117 -388 1782 149 0 0 chr2 238803867 238804135 -14452448 + AluJb SINE Alu 1 268 -44 601 223 78 57 chr2 238804135 238804218 -14452365 + MLT1D LTR MaLR 117 197 -308 2132 119 0 0 chr2 238804218 238804512 -14452071 + AluY SINE Alu 1 294 -17 952 174 0 35 chr2 238804514 238804686 -14451897 + AluSg/x SINE Alu 132 297 -13 836 215 85 89 chr2 238804698 238804944 -14451639 + MLT1D LTR MaLR 177 459 -46 293 246 232 7 chr2 238805000 238805138 -14451445 + MIR SINE MIR 41 209 -53 3930 182 28 8 chr2 238805808 238806114 -14450469 + L1MA9 LINE L1 5475 5773 -539 219 36 0 0 chr2 238806114 238806142 -14450441 + (CA)n Simple_repeat Simple_repeat 1 28 0 3930 182 28 8 chr2 238806142 238806626 -14449957 + L1MA9 LINE L1 5773 6281 -31 34 42 0 0 chr2 238806630 238806678 -14449905 + AT_rich Low_complexity Low_complexity 1 48 0 423 0 0 0 chr2 238807610 238807657 -14448926 + (TG)n Simple_repeat Simple_repeat 2 48 0 2245 65 39 29 chr2 238807873 238808180 -14448403 + AluY SINE Alu 1 310 -1 21 0 0 0 chr2 238808180 238808201 -14448382 + AT_rich Low_complexity Low_complexity 1 21 0 231 305 38 9 chr2 238808274 238808379 -14448204 - MER94 DNA DNA -1 133 26 534 382 91 28 chr2 238808556 238809195 -14447388 - L3 LINE CR1 -235 1342 664 193 343 0 20 chr2 238810018 238810117 -14446466 - L3b LINE CR1 -150 1433 1337 2291 123 19 27 chr2 238810522 238810889 -14445694 - THE1B LTR MaLR 0 364 1 11554 100 4 1 chr2 238810889 238812464 -14444119 - THE1B-int LTR MaLR 0 1580 2 2047 123 50 34 chr2 238812465 238812823 -14443760 - THE1B LTR MaLR 0 364 1 630 302 84 9 chr2 238813070 238813295 -14443288 - MIR SINE MIR -1 261 20 25 0 0 0 chr2 238813646 238813671 -14442912 + AT_rich Low_complexity Low_complexity 1 25 0 2257 186 99 22 chr2 238813703 238814198 -14442385 - MER44D DNA MER2_type 0 605 18 620 312 23 53 chr2 238816006 238816272 -14440311 - MIR SINE MIR -2 260 3 2182 102 0 59 chr2 238816497 238816820 -14439763 + AluSx SINE Alu 1 304 -8 206 267 0 17 chr2 238818753 238818813 -14437770 - L2 LINE L2 -962 2352 2294 1846 88 0 156 chr2 238819471 238819823 -14436760 + AluSx SINE Alu 1 297 -15 604 233 65 81 chr2 238820485 238820807 -14435776 + MER5C DNA MER1_type 1 317 -7 42 57 0 0 chr2 238822320 238822390 -14434193 + AT_rich Low_complexity Low_complexity 1 70 0 241 248 159 84 chr2 238822700 238822914 -14433669 + MER68 LTR ERV1 289 518 -44 2375 141 3 3 chr2 238825738 238826100 -14430483 + THE1B LTR MaLR 1 362 -2 2943 147 9 6 chr2 238826128 238826652 -14429931 + L1PA13 LINE L1 4808 5333 -813 3431 99 28 6 chr2 238826658 238827165 -14429418 + L1PA13 LINE L1 5644 6161 -2 270 193 0 0 chr2 238827523 238827580 -14429003 + GA-rich Low_complexity Low_complexity 2 58 0 272 285 41 24 chr2 238827893 238828016 -14428567 + ERVL LTR ERVL 4309 4433 -1331 230 312 9 83 chr2 238829341 238829450 -14427133 - MIR SINE MIR -11 251 151 601 322 34 41 chr2 238830725 238830992 -14425591 - L3 LINE CR1 -184 1393 1129 275 241 19 0 chr2 238832302 238832356 -14424227 + tRNA-Gly-GGA tRNA tRNA 21 75 0 570 268 89 0 chr2 238833323 238833513 -14423070 + MER3 DNA MER1_type 2 208 -1 1809 259 8 40 chr2 238834480 238835075 -14421508 - L1ME2 LINE L1 -10 6154 5579 192 152 0 0 chr2 238835175 238835208 -14421375 + (CACG)n Simple_repeat Simple_repeat 4 36 0 307 247 25 105 chr2 238835218 238835380 -14421203 - L1ME2 LINE L1 -861 5285 5137 617 263 120 0 chr2 238835382 238835641 -14420942 - L1ME2 LINE L1 -2535 3611 3322 325 189 95 0 chr2 238835652 238835726 -14420857 - L1ME2 LINE L1 -3224 2922 2842 3003 255 38 47 chr2 238836829 238838355 -14418228 + L1M4 LINE L1 2277 3789 -2357 1907 235 83 41 chr2 238838358 238838975 -14417608 + L1M4 LINE L1 3938 4606 -1540 1442 124 55 0 chr2 238838975 238839193 -14417390 - MER30 DNA MER1_type 0 230 1 1907 235 83 41 chr2 238839193 238839476 -14417107 + L1M4 LINE L1 4606 4876 -1270 435 221 59 15 chr2 238839476 238839612 -14416971 + MLT1H1 LTR MaLR 412 553 -2 200 122 0 24 chr2 238839946 238839987 -14416596 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 238 195 61 37 chr2 238839987 238840069 -14416514 - LTR45B LTR ERV1 -62 427 344 2291 129 0 0 chr2 238840107 238840417 -14416166 + AluSg SINE Alu 1 310 0 401 183 55 9 chr2 238840635 238840741 -14415842 + MLT1F LTR MaLR 419 515 -27 1500 42 5 23 chr2 238841779 238841993 -14414590 + L1PA8 LINE L1 5881 6090 -82 844 256 119 95 chr2 238842353 238842874 -14413709 + L2 LINE L2 2627 3169 -144 2211 110 0 7 chr2 238842874 238843173 -14413410 - AluSg SINE Alu -13 297 1 844 256 119 95 chr2 238843173 238843322 -14413261 + L2 LINE L2 3169 3313 0 271 415 44 0 chr2 238843738 238843897 -14412686 + L2 LINE L2 3107 3272 0 529 191 9 0 chr2 238844268 238844373 -14412210 - MER5A DNA MER1_type -80 109 4 195 347 27 0 chr2 238845477 238845552 -14411031 - MIR SINE MIR -111 151 75 300 100 0 40 chr2 238845716 238845766 -14410817 + MER75 DNA T2_type 463 510 -4 332 323 167 9 chr2 238846496 238846837 -14409746 + L1M4 LINE L1 3083 3477 -2669 2873 209 53 18 chr2 238847076 238847818 -14408765 - L1MB8 LINE L1 -12 6166 5399 2166 152 63 130 chr2 238847823 238847857 -14408726 - MLT2B1 LTR ERVL -5 515 480 426 39 0 0 chr2 238847857 238847909 -14408674 + (TAGA)n Simple_repeat Simple_repeat 3 54 0 2166 152 63 130 chr2 238847909 238848426 -14408157 - MLT2B1 LTR ERVL -40 480 1 2422 205 37 5 chr2 238848431 238849056 -14407527 - L1MB8 LINE L1 -749 5397 4753 689 270 103 0 chr2 238849051 238849255 -14407328 - L1M4b LINE L1 -6528 331 107 * 1293 57 0 0 chr2 238849263 238849421 -14407162 - AluY SINE Alu -8 303 146 1344 318 47 31 chr2 238849528 238850606 -14405977 - L1MEc LINE L1 -5232 1164 69 439 134 0 0 chr2 238850904 238850986 -14405597 - L1MA9 LINE L1 -163 6149 6068 195 295 38 48 chr2 238851000 238851105 -14405478 + MER5A DNA MER1_type 65 168 -21 2199 121 0 0 chr2 238852191 238852488 -14404095 - AluSq SINE Alu -16 297 1 297 0 0 0 chr2 238853075 238853108 -14403475 + (TA)n Simple_repeat Simple_repeat 2 34 0 270 293 52 35 chr2 238853253 238853369 -14403214 - L2 LINE L2 -245 3068 2951 2192 106 0 0 chr2 238853629 238853940 -14402643 - AluSx SINE Alu 0 311 1 2029 134 3 0 chr2 238855009 238855299 -14401284 + AluSx SINE Alu 1 291 -21 330 265 53 85 chr2 238855789 238855833 -14400750 + L1ME LINE L1 5266 5310 -811 2264 101 0 16 chr2 238855833 238856140 -14400443 + AluSq SINE Alu 1 302 -11 330 265 53 85 chr2 238856140 238856473 -14400110 + L1ME LINE L1 5310 5631 -490 1968 145 0 10 chr2 238858919 238859216 -14397367 + AluSx SINE Alu 1 294 -18 189 273 91 15 chr2 238860126 238860192 -14396391 - L2 LINE L2 -5 3308 3238 5664 169 39 40 chr2 238860194 238861468 -14395115 + L1MCa LINE L1 20 1291 -5135 809 98 8 8 chr2 238861461 238861593 -14394990 + L1PB4 LINE L1 5658 5789 -367 * 197 174 58 0 chr2 238861599 238861668 -14394915 + (TA)n Simple_repeat Simple_repeat 1 73 0 1551 184 23 0 chr2 238861713 238862012 -14394571 + L1PB4 LINE L1 5850 6155 -1 3519 143 179 42 chr2 238862027 238862139 -14394444 + L1MCa LINE L1 1285 1380 -5046 417 20 0 0 chr2 238862139 238862189 -14394394 + (CA)n Simple_repeat Simple_repeat 2 51 0 3519 143 179 42 chr2 238862189 238862928 -14393655 + L1MCa LINE L1 1380 2016 -4410 2021 117 11 0 chr2 238862928 238863201 -14393382 + AluSg SINE Alu 1 276 -34 191 36 36 0 chr2 238863204 238863232 -14393351 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 3519 143 179 42 chr2 238863232 238863271 -14393312 + L1MCa LINE L1 2017 2049 -4377 698 227 0 0 chr2 238863271 238863403 -14393180 + FLAM_C SINE Alu 2 133 0 3519 143 179 42 chr2 238863403 238863580 -14393003 + L1MCa LINE L1 2049 2505 -3921 393 235 10 10 chr2 238864031 238864133 -14392450 + L2 LINE L2 2876 2977 -337 1383 154 174 7 chr2 238864145 238864438 -14392145 - MER7A DNA MER2_type -6 340 1 344 333 0 44 chr2 238865529 238865688 -14390895 - MIR SINE MIR -25 237 86 194 362 56 34 chr2 238865880 238866203 -14390380 - L2 LINE L2 -435 2879 2550 793 191 70 51 chr2 238866220 238866435 -14390148 - MER20 DNA MER1_type 0 219 1 327 317 76 27 chr2 238866452 238866676 -14389907 + MIR SINE MIR 23 257 -5 283 182 34 68 chr2 238867647 238867735 -14388848 - HAL1 LINE L1 -973 1534 1450 395 292 88 79 chr2 238867742 238868184 -14388399 - HAL1 LINE L1 -1089 1418 973 311 194 0 146 chr2 238868923 238869067 -14387516 - LTR41 LTR ERVL -11 762 640 17829 80 11 7 chr2 238869067 238871692 -14384891 - L1PA6 LINE L1 -1721 4425 1790 7050 78 6 0 chr2 238871692 238873423 -14383160 + L1PA6 LINE L1 4416 6152 -2 691 269 114 63 chr2 238873434 238874055 -14382528 - LTR41 LTR ERVL -120 653 1 557 233 67 20 chr2 238874139 238874289 -14382294 - MER5A DNA MER1_type 0 189 33 280 370 27 27 chr2 238875199 238875383 -14381200 + MIR3 SINE MIR 18 201 -7 33 0 0 0 chr2 238876003 238876036 -14380547 + AT_rich Low_complexity Low_complexity 1 33 0 253 250 0 0 chr2 238876710 238876762 -14379821 + L2 LINE L2 3244 3295 -18 821 133 0 0 chr2 238876778 238876906 -14379677 + AluSp/q SINE Alu 182 309 -4 718 269 6 6 chr2 238877016 238877172 -14379411 - MER5B DNA MER1_type -22 156 1 370 262 68 63 chr2 238877175 238877541 -14379042 - L1MEd LINE L1 -5098 1021 654 321 306 134 60 chr2 238877803 238878071 -14378512 - L1MEd LINE L1 -5814 305 18 1780 164 17 17 chr2 238878477 238878491 -14378092 - AluSx SINE Alu -13 299 286 189 0 0 0 chr2 238878491 238878512 -14378071 + (TG)n Simple_repeat Simple_repeat 2 22 0 1780 164 17 17 chr2 238878512 238878795 -14377788 - AluSx SINE Alu -25 287 2 928 186 72 14 chr2 238879666 238880027 -14376556 - L1MC2 LINE L1 -2 6342 5841 200 189 0 0 chr2 238880249 238880286 -14376297 + MIR SINE MIR 112 148 -114 220 280 9 37 chr2 238880359 238880466 -14376117 + GA-rich Low_complexity Low_complexity 4 107 0 2286 94 3 0 chr2 238883304 238883603 -14372980 - AluY SINE Alu -11 300 1 3827 65 0 0 chr2 238885047 238885527 -14371056 - L1PA7 LINE L1 -8 6146 5667 3460 254 88 34 chr2 238885527 238887470 -14369113 - L1ME2 LINE L1 -69 6029 3961 236 29 0 29 chr2 238887470 238887504 -14369079 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 3460 254 88 34 chr2 238887504 238888231 -14368352 - L1ME2 LINE L1 -2137 3961 3275 1025 258 69 27 chr2 238888239 238888763 -14367820 - L1ME2 LINE L1 -3131 2949 2404 791 248 98 54 chr2 238888894 238888948 -14367635 - L1ME2 LINE L1 -3685 2395 2345 2263 94 3 10 chr2 238888948 238889245 -14367338 + AluSx SINE Alu 1 295 -17 791 248 98 54 chr2 238889245 238889628 -14366955 - L1ME2 LINE L1 -3735 2345 1984 1176 279 63 38 chr2 238889822 238890719 -14365864 - L1ME2 LINE L1 -4362 1718 799 363 133 36 96 chr2 238890741 238890789 -14365794 - AluSg/x SINE Alu -6 296 254 6990 58 26 11 chr2 238890789 238891667 -14364916 - MER11D LTR ERVK 0 897 7 1871 139 0 0 chr2 238891667 238891925 -14364658 - AluSx SINE Alu -52 260 3 1037 285 76 72 chr2 238891927 238892636 -14363947 - L1ME2 LINE L1 -5279 791 80 1627 45 0 0 chr2 238892636 238892837 -14363746 - L1PA4 LINE L1 -2 6153 5953 958 43 0 0 chr2 238892837 238892954 -14363629 + L1PA4 LINE L1 5836 5952 -202 377 227 0 0 chr2 238893574 238893649 -14362934 - MER116 DNA Mariner -2 78 4 611 302 109 23 chr2 238893825 238894574 -14362009 + L1ME LINE L1 4883 5704 -458 22 35 0 0 chr2 238894640 238894669 -14361914 + AT_rich Low_complexity Low_complexity 1 29 0 1321 217 3 27 chr2 238894745 238895044 -14361539 - AluJo SINE Alu -11 301 10 26 50 0 0 chr2 238895124 238895164 -14361419 + AT_rich Low_complexity Low_complexity 1 40 0 26 74 0 0 chr2 238895274 238895328 -14361255 + AT_rich Low_complexity Low_complexity 1 54 0 32 43 0 0 chr2 238895425 238895471 -14361112 + AT_rich Low_complexity Low_complexity 1 46 0 1948 127 0 7 chr2 238896109 238896416 -14360167 - AluSx SINE Alu 0 305 1 247 290 196 28 chr2 238896986 238897200 -14359383 + MIR SINE MIR 11 260 -2 563 317 40 13 chr2 238897393 238897947 -14358636 - L1 LINE L1 -2379 5186 4603 421 280 47 48 chr2 238898022 238898266 -14358317 + L2 LINE L2 2802 3050 -263 260 294 63 71 chr2 238898345 238898471 -14358112 + MIR3 SINE MIR 82 206 -2 1917 145 0 0 chr2 238898811 238899094 -14357489 - AluSx SINE Alu -29 283 1 405 0 0 0 chr2 238899255 238899300 -14357283 + (TG)n Simple_repeat Simple_repeat 2 46 0 405 84 14 0 chr2 238900333 238900404 -14356179 - L1MA4A LINE L1 0 6303 6232 629 236 30 35 chr2 238900451 238900650 -14355933 - L1 LINE L1 -5853 1712 1515 1087 199 4 8 chr2 238900762 238901003 -14355580 + L1P LINE L1 4955 5194 -952 21 0 0 0 chr2 238901871 238901892 -14354691 + AT_rich Low_complexity Low_complexity 1 21 0 11210 56 0 2 chr2 238902017 238903457 -14353126 - L1P LINE L1 -3810 2336 900 1506 179 33 43 chr2 238903776 238904077 -14352506 + AluJb SINE Alu 1 298 -14 221 357 198 0 chr2 238905298 238905424 -14351159 - L2 LINE L2 0 3272 3122 726 208 8 0 chr2 238905668 238905798 -14350785 - MER2 DNA MER2_type -212 133 3 301 269 0 0 chr2 238905800 238905878 -14350705 + (TATG)n Simple_repeat Simple_repeat 3 80 0 237 174 0 22 chr2 238906307 238906353 -14350230 + MLT2A1 LTR ERVL 305 349 -95 233 349 9 28 chr2 238907286 238907395 -14349188 + L1ME LINE L1 320 426 -5644 1206 233 155 8 chr2 238908036 238908538 -14348045 + L1ME LINE L1 5112 5687 -475 2144 119 0 0 chr2 238908800 238909086 -14347497 + AluSx SINE Alu 1 286 -26 278 221 35 71 chr2 238910316 238910429 -14346154 + LTR67 LTR ERVL 443 551 -6 29 60 0 0 chr2 238910958 238911008 -14345575 + AT_rich Low_complexity Low_complexity 1 50 0 2530 178 41 41 chr2 238911022 238911536 -14345047 - L1MA7 LINE L1 -60 6231 5715 2848 201 22 51 chr2 238911536 238912247 -14344336 + LTR8 LTR ERV1 1 691 0 2530 178 41 41 chr2 238912247 238912343 -14344240 - L1MA7 LINE L1 -575 5716 5621 198 0 0 0 chr2 238913248 238913270 -14343313 + (A)n Simple_repeat Simple_repeat 1 22 0 278 176 0 0 chr2 238913721 238913772 -14342811 + L1MA9 LINE L1 6068 6118 -194 21 36 0 0 chr2 238913826 238913854 -14342729 + AT_rich Low_complexity Low_complexity 1 28 0 1240 293 53 10 chr2 238914262 238915010 -14341573 - L1 LINE L1 -1981 4165 3358 331 217 0 104 chr2 238915071 238915177 -14341406 + MLT1H LTR MaLR 428 522 -27 238 222 116 8 chr2 238915240 238915416 -14341167 - L1P LINE L1 -2868 3278 3077 1844 150 106 19 chr2 238915503 238915882 -14340701 - L1PA16 LINE L1 0 6166 5755 347 226 15 109 chr2 238915888 238916025 -14340558 - L1MDa LINE L1 -5111 1830 1707 269 255 64 28 chr2 238916050 238916191 -14340392 - L1MDa LINE L1 -4923 1500 1355 1333 229 105 57 chr2 238916447 238916923 -14339660 + MLT1D LTR MaLR 3 501 -4 1152 247 49 25 chr2 238916930 238917108 -14339475 + MLT1A2 LTR MaLR 1 173 -201 213 39 0 0 chr2 238917108 238917134 -14339449 + (TC)n Simple_repeat Simple_repeat 2 27 0 1152 247 49 25 chr2 238917134 238917320 -14339263 + MLT1A2 LTR MaLR 173 374 0 282 354 29 15 chr2 238917661 238917867 -14338716 - L1MDa LINE L1 -5855 1076 868 488 241 98 64 chr2 238917918 238918315 -14338268 + LTR48 LTR ERV1 170 787 0 244 343 10 29 chr2 238918451 238918553 -14338030 - L2 LINE L2 -1 3312 3213 715 212 5 63 chr2 238918605 238918794 -14337789 - LTR49 LTR ERV1 -414 181 4 21 36 0 0 chr2 238919264 238919292 -14337291 + AT_rich Low_complexity Low_complexity 1 28 0 6237 164 37 8 chr2 238919315 238921367 -14335216 - L1MA4 LINE L1 -35 6447 4335 975 124 11 11 chr2 238921367 238921511 -14335072 + (TTTC)n Simple_repeat Simple_repeat 1 322 0 975 124 11 11 chr2 238921511 238921689 -14334894 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 3182 199 7 8 chr2 238921705 238922303 -14334280 - L1MA4 LINE L1 -4730 598 2 7552 29 0 0 chr2 238922563 238923926 -14332657 - L1PA4 LINE L1 -2 6153 4791 3611 60 10 2 chr2 238924066 238924548 -14332035 + L1PA2 LINE L1 5665 6150 -5 1849 190 43 53 chr2 238924548 238925038 -14331545 + L1 LINE L1 4739 5223 -923 2879 225 21 8 chr2 238925056 238925661 -14330922 + L1M1 LINE L1 1100 1712 -5853 330 54 36 0 chr2 238925709 238925765 -14330818 + L1MA4A LINE L1 6232 6289 -14 1489 159 45 3 chr2 238925927 238926217 -14330366 - AluSx SINE Alu -10 302 1 2467 216 24 24 chr2 238926227 238926388 -14330195 - L1 LINE L1 -3235 2911 2751 1790 98 11 25 chr2 238926388 238926662 -14329921 + AluY SINE Alu 37 306 -5 2467 216 24 24 chr2 238926662 238927125 -14329458 - L1 LINE L1 -3394 2752 2287 2111 100 30 24 chr2 238927113 238927443 -14329140 + THE1C-int LTR MaLR 1249 1580 0 * 1500 127 124 43 chr2 238927443 238927790 -14328793 + THE1C LTR MaLR 1 375 0 2181 136 0 0 chr2 238928153 238928455 -14328128 - AluSq SINE Alu -11 302 1 289 226 69 20 chr2 238928688 238928790 -14327793 - L1ME4a LINE L1 -44 6077 5971 28 29 0 0 chr2 238930808 238930843 -14325740 + AT_rich Low_complexity Low_complexity 1 35 0 1327 196 23 4 chr2 238931281 238931546 -14325037 - AluJo SINE Alu -5 307 38 181 219 0 0 chr2 238931744 238931785 -14324798 + L2 LINE L2 3273 3313 0 2358 80 0 0 chr2 238931852 238932152 -14324431 - AluY SINE Alu -11 300 1 3816 225 78 16 chr2 238933068 238934041 -14322542 - MER45B DNA AcHobo -3 1037 5 2259 102 0 3 chr2 238934461 238934755 -14321828 + AluSx SINE Alu 10 302 -10 451 314 87 13 chr2 238935525 238935754 -14320829 - MIR SINE MIR 0 262 17 21 36 0 0 chr2 238936026 238936054 -14320529 + AT_rich Low_complexity Low_complexity 1 28 0 2456 40 13 3 chr2 238936234 238936532 -14320051 + AluY SINE Alu 1 301 -10 21 36 0 0 chr2 238936719 238936747 -14319836 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 238937291 238937315 -14319268 + AT_rich Low_complexity Low_complexity 1 24 0 193 271 21 0 chr2 238937731 238937779 -14318804 + L2 LINE L2 3264 3312 -1 1822 150 0 35 chr2 238938138 238938451 -14318132 - AluSx SINE Alu -10 302 1 360 317 11 55 chr2 238938970 238939153 -14317430 + MIR SINE MIR 53 227 -35 7121 72 123 6 chr2 238939867 238940980 -14315603 + L1P LINE L1 2 1244 -4902 659 202 110 23 chr2 238941399 238941572 -14315011 - MER5A DNA MER1_type -1 188 1 244 347 64 53 chr2 238941626 238941891 -14314692 - L2 LINE L2 -601 2713 2446 810 118 20 0 chr2 238941955 238942107 -14314476 + (TAGA)n Simple_repeat Simple_repeat 4 158 0 2303 60 3 13 chr2 238942536 238942834 -14313749 - AluY SINE Alu -3 308 14 323 297 29 23 chr2 238943003 238943178 -14313405 + (TATG)n Simple_repeat Simple_repeat 3 178 0 517 308 63 0 chr2 238943570 238943729 -14312854 + MER5A DNA MER1_type 18 186 -3 1917 136 4 4 chr2 238945154 238945464 -14311119 + AluSg SINE Alu 1 310 0 554 250 85 0 chr2 238945773 238945937 -14310646 + MER45A DNA AcHobo 1 178 0 1880 178 38 28 chr2 238947588 238948134 -14308449 + MLT2A2 LTR ERVL 1 554 0 620 234 18 48 chr2 238948871 238949038 -14307545 - MIR SINE MIR -5 257 96 245 282 29 86 chr2 238949276 238949485 -14307098 + MLT1I LTR MaLR 98 294 -115 256 198 111 0 chr2 238949510 238949591 -14306992 + MLT1J2 LTR MaLR 339 428 -22 506 308 61 48 chr2 238949894 238950206 -14306377 + HAL1 LINE L1 766 1081 -1426 28679 29 1 0 chr2 238950504 238954108 -14302475 + L1P LINE L1 1392 4996 -1150 265 208 52 13 chr2 238954284 238954361 -14302222 - MLT1A2 LTR MaLR -11 363 284 1569 148 139 60 chr2 238954482 238954914 -14301669 - MER31B LTR ERV1 0 466 1 232 267 76 0 chr2 238955359 238955464 -14301119 - MLT1L LTR MaLR -6 609 497 23 54 0 0 chr2 238955483 238955520 -14301063 + AT_rich Low_complexity Low_complexity 1 37 0 2681 77 14 11 chr2 238955648 238956011 -14300572 + THE1B LTR MaLR 1 364 0 821 177 89 0 chr2 238956918 238957076 -14299507 - MSTB1 LTR MaLR -117 315 144 12331 22 1 5 chr2 238957076 238958991 -14297592 + L1P1 LINE L1 3870 5774 -381 709 199 6 6 chr2 238959132 238959288 -14297295 - MSTB1 LTR MaLR -276 156 1 207 69 0 0 chr2 238959424 238959453 -14297130 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 21 0 0 0 chr2 238960547 238960568 -14296015 + AT_rich Low_complexity Low_complexity 1 21 0 703 277 42 36 chr2 238960859 238961178 -14295405 + L2 LINE L2 2718 3055 -258 327 49 0 0 chr2 238961181 238961222 -14295361 + (TG)n Simple_repeat Simple_repeat 2 42 0 808 197 47 11 chr2 238961227 238961481 -14295102 + MLT1B LTR MaLR 1 362 -28 224 29 0 29 chr2 238961481 238961515 -14295068 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 808 197 47 11 chr2 238961515 238961546 -14295037 + MLT1B LTR MaLR 362 390 0 323 208 19 47 chr2 238961664 238961770 -14294813 + L2 LINE L2 3106 3208 -105 588 244 177 61 chr2 238962419 238962857 -14293726 - MLT1G1 LTR MaLR -2 588 61 245 292 0 0 chr2 238963740 238963805 -14292778 + MIR3 SINE MIR 137 201 -7 452 245 91 7 chr2 238964392 238964535 -14292048 - MIR SINE MIR -16 246 92 225 132 0 0 chr2 238965768 238965806 -14290777 + (TTGG)n Simple_repeat Simple_repeat 4 41 0 344 295 0 9 chr2 238966326 238966431 -14290152 + MIR SINE MIR 95 198 -64 342 346 112 5 chr2 238966498 238966712 -14289871 + L3 LINE CR1 1338 1574 -3 27 49 0 0 chr2 238967294 238967335 -14289248 + AT_rich Low_complexity Low_complexity 1 41 0 740 262 32 73 chr2 238967909 238968120 -14288463 + MLT1I LTR MaLR 71 264 -145 1751 169 71 3 chr2 238968120 238968445 -14288138 - MER7A DNA MER2_type 0 346 2 740 262 32 73 chr2 238968445 238968577 -14288006 + MLT1I LTR MaLR 264 400 -9 2247 129 3 0 chr2 238968924 238969235 -14287348 + AluSq SINE Alu 1 312 -1 1277 225 45 41 chr2 238969385 238969500 -14287083 - Charlie1b DNA MER1_type -2271 490 377 4293 27 6 6 chr2 238969500 238970020 -14286563 + L1PA4 LINE L1 5636 6155 0 1277 225 45 41 chr2 238970020 238970366 -14286217 - Charlie1b DNA MER1_type -2384 377 27 502 31 0 0 chr2 238970931 238970995 -14285588 - L1PA4 LINE L1 -3 6152 6089 254 304 76 0 chr2 238971223 238971315 -14285268 + L2 LINE L2 3203 3301 -12 311 244 7 67 chr2 238971890 238972025 -14284558 - L1MC4 LINE L1 -974 7068 6942 310 306 86 42 chr2 238972077 238972242 -14284341 - MIR SINE MIR -61 147 31 1688 150 12 77 chr2 238972533 238972860 -14283723 + AluJo SINE Alu 1 306 -6 1410 168 58 112 chr2 238972997 238973409 -14283174 + MLT1B LTR MaLR 1 390 0 390 234 110 43 chr2 238974239 238974448 -14282135 + L1MC4 LINE L1 6907 7129 -913 267 114 0 0 chr2 238974918 238974962 -14281621 + (GGA)n Simple_repeat Simple_repeat 3 46 0 393 302 0 35 chr2 238975460 238975576 -14281007 - LTR67 LTR ERVL -344 213 102 12292 30 7 5 chr2 238975690 238977908 -14278675 + L1PA2 LINE L1 3916 6136 -19 3123 31 8 0 chr2 238978008 238978392 -14278191 + L1PA2 LINE L1 5768 6154 -1 559 157 116 16 chr2 238978758 238978879 -14277704 - FLAM_C SINE Alu 0 133 1 25 51 0 0 chr2 238981733 238981772 -14274811 + AT_rich Low_complexity Low_complexity 1 39 0 1073 190 5 40 chr2 238982062 238982262 -14274321 + AluJb SINE Alu 97 289 -23 320 303 57 8 chr2 238982344 238982466 -14274117 - MIR SINE MIR -50 212 85 3293 161 27 37 chr2 238982848 238983518 -14273065 - LTR58 LTR ERV1 -16 663 1 2050 156 37 6 chr2 238983608 238983961 -14272622 + THE1B LTR MaLR 1 364 0 295 247 0 0 chr2 238983977 238984050 -14272533 + MLT1F1 LTR MaLR 53 125 -442 2552 153 79 11 chr2 238984050 238984607 -14271976 + L1MC3 LINE L1 7191 7785 0 18828 166 23 7 chr2 238985515 238989058 -14267525 + L1M1 LINE L1 10 3610 -3955 1922 100 65 3 chr2 238989055 238989282 -14267301 - L1P5 LINE L1 -427 5724 5472 * 189 0 0 0 chr2 238989282 238989303 -14267280 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 1922 100 65 3 chr2 238989303 238989384 -14267199 - L1P5 LINE L1 -679 5472 5397 2205 122 25 2 chr2 238989627 238990022 -14266561 + L1MA1 LINE L1 3207 3610 -3955 2029 100 65 3 chr2 238990019 238990246 -14266337 - L1P5 LINE L1 -427 5724 5472 * 189 0 0 0 chr2 238990246 238990267 -14266316 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 2029 100 65 3 chr2 238990267 238990348 -14266235 - L1P5 LINE L1 -679 5472 5397 4749 189 35 19 chr2 238990358 238991428 -14265155 - L1 LINE L1 -1236 4910 3823 1052 124 51 7 chr2 238991422 238991698 -14264885 + L1PB1 LINE L1 5736 6149 -2 * 14424 198 15 6 chr2 238991730 238995007 -14261576 + L1MA1 LINE L1 3595 6904 -743 1610 140 31 23 chr2 238995008 238995325 -14261258 + THE1B LTR MaLR 1 364 0 4078 120 21 22 chr2 238995325 238995992 -14260591 + L1MA1 LINE L1 6901 7566 -155 3229 214 58 25 chr2 238996000 238996815 -14259768 + L1P3 LINE L1 10 851 -5610 7859 167 23 29 chr2 238996943 238998992 -14257591 + L1P3 LINE L1 549 2603 -3858 369 256 173 64 chr2 238999466 238999778 -14256805 + HAL1b LINE L1 126 471 -877 1258 143 25 0 chr2 238999823 239000026 -14256557 + MER2 DNA MER2_type 2 209 -136 841 258 91 65 chr2 239000123 239000704 -14255879 + HAL1b LINE L1 496 1091 -257 390 317 78 0 chr2 239000847 239001014 -14255569 + MIR SINE MIR 67 246 -16 26 50 0 0 chr2 239001065 239001105 -14255478 + AT_rich Low_complexity Low_complexity 1 40 0 243 180 0 0 chr2 239001270 239001300 -14255283 + (TA)n Simple_repeat Simple_repeat 1 33 -17 216 0 0 0 chr2 239001300 239001324 -14255259 + (TC)n Simple_repeat Simple_repeat 2 25 0 243 180 0 0 chr2 239001324 239001343 -14255240 + (TA)n Simple_repeat Simple_repeat 32 50 0 2390 163 19 60 chr2 239001897 239002723 -14253860 + L1M2 LINE L1 4793 5606 -706 21 0 0 0 chr2 239003242 239003263 -14253320 + AT_rich Low_complexity Low_complexity 1 21 0 31 26 0 0 chr2 239004349 239004387 -14252196 + AT_rich Low_complexity Low_complexity 1 38 0 731 288 134 36 chr2 239006181 239006814 -14249769 + L2 LINE L2 2643 3312 -1 627 238 92 12 chr2 239009405 239009569 -14247014 - MER5B DNA MER1_type -1 177 1 180 64 64 21 chr2 239010001 239010048 -14246535 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 323 321 72 43 chr2 239010255 239010464 -14246119 + MIR SINE MIR 21 235 -27 310 268 73 24 chr2 239010506 239010629 -14245954 + MER94 DNA DNA 6 134 0 2058 124 0 0 chr2 239010720 239010995 -14245588 + AluSg SINE Alu 6 280 -30 549 287 37 16 chr2 239011021 239011209 -14245374 + MIR SINE MIR 71 262 0 283 327 138 53 chr2 239011928 239012567 -14244016 + L2 LINE L2 1712 2404 -910 569 340 47 13 chr2 239012590 239012822 -14243761 + MIR SINE MIR 23 262 0 232 82 20 20 chr2 239013701 239013750 -14242833 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 305 275 8 0 chr2 239013751 239013798 -14242785 + (TA)n Simple_repeat Simple_repeat 1 46 -75 997 214 125 29 chr2 239013798 239014111 -14242472 + MER2 DNA MER2_type 2 344 0 305 275 8 0 chr2 239014111 239014183 -14242400 + (TA)n Simple_repeat Simple_repeat 46 121 0 2208 183 70 0 chr2 239014823 239015221 -14241362 + MSTB LTR MaLR 1 426 0 705 284 64 67 chr2 239015446 239015819 -14240764 - MLT1L LTR MaLR -99 516 145 180 77 0 0 chr2 239016664 239016690 -14239893 + (TG)n Simple_repeat Simple_repeat 2 27 0 473 284 39 64 chr2 239016983 239017187 -14239396 - MIR SINE MIR -52 210 12 2075 170 40 28 chr2 239017955 239018384 -14238199 - Tigger2a DNA MER2_type 0 434 1 478 336 96 16 chr2 239018723 239019170 -14237413 + L2 LINE L2 1923 2405 -909 251 412 100 6 chr2 239019225 239019395 -14237188 + L2 LINE L2 2569 2754 -560 293 353 210 27 chr2 239019497 239019797 -14236786 + L2 LINE L2 2917 3271 -1 315 198 21 161 chr2 239021023 239021137 -14235446 - MER112 DNA MER1_type -89 171 93 273 109 0 0 chr2 239021137 239021183 -14235400 + (TG)n Simple_repeat Simple_repeat 1 46 0 315 198 21 161 chr2 239021183 239021260 -14235323 - MER112 DNA MER1_type -167 93 7 982 60 15 0 chr2 239021438 239021572 -14235011 - L1PA7 LINE L1 0 6154 6019 1636 79 0 0 chr2 239021964 239022180 -14234403 - L1PA7 LINE L1 0 6154 5939 5344 43 11 3 chr2 239022180 239022878 -14233705 + L1PA7 LINE L1 5231 5933 -221 369 168 36 36 chr2 239023991 239024158 -14232425 + (GTGTG)n Simple_repeat Simple_repeat 4 170 0 195 303 46 37 chr2 239024310 239024419 -14232164 - L2 LINE L2 -108 3205 3096 1948 235 55 73 chr2 239024459 239025115 -14231468 + MLT1E1 LTR MaLR 1 644 -10 1253 210 27 23 chr2 239026624 239026924 -14229659 - MLT1A1 LTR MaLR 0 365 65 312 214 71 14 chr2 239026937 239027007 -14229576 + MLT1E2 LTR MaLR 325 398 -228 268 220 34 0 chr2 239027008 239027067 -14229516 - MLT1A1 LTR MaLR -313 61 1 202 365 14 0 chr2 239027316 239027390 -14229193 + L2 LINE L2 2230 2304 -1010 3353 153 36 7 chr2 239027416 239027993 -14228590 - LTR26 LTR ERV1 -9 594 1 390 376 73 16 chr2 239028008 239028380 -14228203 + L2 LINE L2 2349 2741 -573 283 175 0 63 chr2 239028386 239028449 -14228134 - L1MA7 LINE L1 -238 6053 5995 567 159 28 0 chr2 239028450 239028557 -14228026 + L1MA7 LINE L1 6176 6285 -6 190 381 12 0 chr2 239028596 239028680 -14227903 + L2 LINE L2 2775 2859 -455 28 0 0 0 chr2 239029654 239029682 -14226901 + AT_rich Low_complexity Low_complexity 1 28 0 732 91 0 0 chr2 239029720 239029830 -14226753 + (TTTC)n Simple_repeat Simple_repeat 1 110 0 655 153 0 9 chr2 239029830 239029941 -14226642 - AluJb SINE Alu -201 111 2 982 306 158 5 chr2 239030616 239030995 -14225588 + L2 LINE L2 2339 2775 -539 1235 298 47 20 chr2 239031078 239031152 -14225431 - LTR16B LTR ERVL 0 464 393 3234 174 76 8 chr2 239031152 239031771 -14224812 - MER67B LTR ERV1 0 661 1 1235 298 47 20 chr2 239031771 239032142 -14224441 - LTR16B LTR ERVL -71 393 7 835 293 97 23 chr2 239032148 239032541 -14224042 + L2 LINE L2 2887 3308 -5 330 26 0 0 chr2 239032705 239032744 -14223839 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1933 128 7 0 chr2 239032744 239033018 -14223565 - AluSx SINE Alu -36 276 1 252 333 100 17 chr2 239036425 239036545 -14220038 + MIR3 SINE MIR 52 181 -27 2705 96 5 11 chr2 239037386 239037763 -14218820 + THE1C LTR MaLR 1 375 0 2782 266 82 31 chr2 239038078 239038897 -14217686 + MER69B DNA AcHobo 1 899 -1627 1292 214 154 31 chr2 239038897 239039313 -14217270 - MLT1C LTR MaLR 0 467 1 2782 266 82 31 chr2 239039313 239039659 -14216924 + MER69B DNA AcHobo 899 1226 0 187 327 41 64 chr2 239039755 239039975 -14216608 + L2 LINE L2 2723 2937 -377 193 356 76 0 chr2 239040131 239040249 -14216334 + L2 LINE L2 3146 3272 0 1682 242 147 39 chr2 239040522 239041188 -14215395 - MER21B LTR ERV1 -111 752 15 735 69 0 0 chr2 239041188 239041290 -14215293 + (TTC)n Simple_repeat Simple_repeat 1 102 0 490 270 44 29 chr2 239043667 239043804 -14212779 - MIR SINE MIR -3 259 121 1078 187 150 41 chr2 239046281 239046575 -14210008 + MER2 DNA MER2_type 20 345 0 4268 198 117 13 chr2 239046633 239047616 -14208967 + MER52A LTR ERV1 1 1196 -559 367 182 0 0 chr2 239047608 239047674 -14208909 + MER52A LTR ERV1 1684 1749 -6 * 1302 262 95 58 chr2 239047851 239048154 -14208429 - L1MCc LINE L1 -3218 3723 3433 1857 157 0 0 chr2 239048154 239048421 -14208162 - AluSx SINE Alu -45 267 1 1302 262 95 58 chr2 239048421 239048712 -14207871 - L1MCc LINE L1 -3508 3433 3154 456 101 0 0 chr2 239048712 239048781 -14207802 - L1MA3 LINE L1 0 6305 6237 1302 262 95 58 chr2 239048781 239049786 -14206797 - L1MCc LINE L1 -3787 3154 2076 377 247 65 95 chr2 239049807 239050222 -14206361 - L1MCc LINE L1 -4897 1526 1261 395 52 17 0 chr2 239051011 239051069 -14205514 + (TA)n Simple_repeat Simple_repeat 1 59 0 1876 167 25 52 chr2 239051650 239052051 -14204532 + MLT1B LTR MaLR 1 390 0 448 230 47 115 chr2 239052571 239053043 -14203540 - L1MC5 LINE L1 -399 7562 7040 862 247 39 82 chr2 239053142 239053698 -14202885 - L1MC5 LINE L1 -870 7091 6558 315 0 0 0 chr2 239053802 239053837 -14202746 + (TG)n Simple_repeat Simple_repeat 2 36 0 238 349 163 0 chr2 239054200 239054452 -14202131 - L2 LINE L2 -2331 983 691 2305 100 0 3 chr2 239054632 239054941 -14201642 - AluSc SINE Alu -1 308 1 186 71 0 0 chr2 239055708 239055736 -14200847 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 30 0 0 0 chr2 239056990 239057020 -14199563 + AT_rich Low_complexity Low_complexity 1 30 0 349 284 83 105 chr2 239057710 239058118 -14198465 - MLT1J LTR MaLR -5 506 108 343 278 66 40 chr2 239058221 239058372 -14198211 - MIR SINE MIR -74 188 34 470 301 64 0 chr2 239058591 239058747 -14197836 + L2 LINE L2 2172 2337 -977 1149 276 58 25 chr2 239058779 239059215 -14197368 + L2 LINE L2 2551 3000 -313 521 322 40 5 chr2 239059229 239059428 -14197155 + L2 LINE L2 3108 3313 0 23 0 0 0 chr2 239059685 239059708 -14196875 + AT_rich Low_complexity Low_complexity 1 23 0 199 298 24 81 chr2 239059809 239059837 -14196746 - L2 LINE L2 -3 3269 3241 1226 181 32 129 chr2 239059837 239059896 -14196687 - MLT1A1 LTR MaLR 0 365 302 1985 146 7 0 chr2 239059896 239060191 -14196392 + AluSx SINE Alu 1 297 -15 1226 181 32 129 chr2 239060191 239060535 -14196048 - MLT1A1 LTR MaLR -63 302 1 199 298 24 81 chr2 239060535 239060630 -14195953 - L2 LINE L2 -31 3241 3153 750 276 43 82 chr2 239060806 239061380 -14195203 + L1ME2 LINE L1 5579 6164 0 73 32 0 0 chr2 239061566 239061660 -14194923 + AT_rich Low_complexity Low_complexity 1 94 0 276 321 34 16 chr2 239061663 239061861 -14194722 - MIR SINE MIR -93 169 4 393 313 108 19 chr2 239063521 239063735 -14192848 + HAL1b LINE L1 380 612 -736 265 194 0 65 chr2 239063841 239063903 -14192680 - MIR SINE MIR 0 262 205 282 204 307 0 chr2 239063920 239064008 -14192575 + MIR SINE MIR 134 248 -14 21 57 0 0 chr2 239064260 239064295 -14192288 + AT_rich Low_complexity Low_complexity 1 35 0 341 314 57 60 chr2 239064519 239064888 -14191695 + L1MC4a LINE L1 2133 2500 -3646 234 219 59 42 chr2 239064939 239065058 -14191525 + L1MC4a LINE L1 2593 2713 -3433 611 198 147 38 chr2 239065245 239065402 -14191181 - MER58A DNA MER1_type -2 222 49 27 0 0 0 chr2 239065402 239065429 -14191154 + AT_rich Low_complexity Low_complexity 1 27 0 432 280 83 15 chr2 239065449 239065713 -14190870 + L1MC4a LINE L1 3588 3869 -2277 22 0 0 0 chr2 239065846 239065868 -14190715 + AT_rich Low_complexity Low_complexity 1 22 0 282 256 16 31 chr2 239065877 239066022 -14190561 + L1MC4a LINE L1 4150 4292 -1854 2071 159 55 38 chr2 239066062 239066280 -14190303 - MSTA LTR MaLR 0 428 215 2311 99 3 0 chr2 239066280 239066592 -14189991 - AluSp SINE Alu 0 313 1 2071 159 55 38 chr2 239066592 239066794 -14189789 - MSTA LTR MaLR -213 215 1 24 0 0 0 chr2 239067604 239067628 -14188955 + AT_rich Low_complexity Low_complexity 1 24 0 394 239 69 54 chr2 239067700 239067830 -14188753 - L1MDa LINE L1 -4026 2514 2383 243 189 0 19 chr2 239067879 239067932 -14188651 + L1MC4a LINE L1 5351 5402 -2406 242 217 0 0 chr2 239067931 239068000 -14188583 - L1MEc LINE L1 -2982 3098 3030 * 1016 283 72 43 chr2 239067988 239068766 -14187817 - L1MEc LINE L1 -3510 2570 1819 991 268 21 60 chr2 239068769 239069469 -14187114 - L1MEc LINE L1 -5257 813 2 323 340 67 56 chr2 239069500 239069874 -14186709 + L1MC4a LINE L1 5422 5799 -322 440 311 136 4 chr2 239069888 239070116 -14186467 - MIR SINE MIR -4 258 1 281 289 31 0 chr2 239070148 239070245 -14186338 + L1MC4a LINE L1 5817 5916 -1892 221 380 107 7 chr2 239072166 239072316 -14184267 - MIR3 SINE MIR -1 207 43 3737 71 6 0 chr2 239072316 239072807 -14183776 - L1PA13 LINE L1 -1 6162 5669 271 385 101 14 chr2 239073373 239073591 -14182992 + MIR SINE MIR 14 250 -12 211 51 0 51 chr2 239073642 239073681 -14182902 + (TTTTTG)n Simple_repeat Simple_repeat 3 39 0 365 333 12 108 chr2 239073925 239074174 -14182409 + L2 LINE L2 3048 3272 0 380 355 12 0 chr2 239074633 239074805 -14181778 + MIR SINE MIR 89 262 0 2843 7 0 0 chr2 239074989 239075298 -14181285 - AluYa5 SINE Alu -2 309 1 2102 121 43 32 chr2 239077573 239077944 -14178639 + THE1C LTR MaLR 1 375 0 212 59 29 0 chr2 239080602 239080636 -14175947 + (TTATA)n Simple_repeat Simple_repeat 4 38 0 718 313 106 50 chr2 239080982 239081464 -14175119 - L2 LINE L2 -1 3312 2804 4083 197 29 14 chr2 239082661 239083726 -14172857 + L1MB8 LINE L1 5088 6169 -9 253 196 124 62 chr2 239084721 239084818 -14171765 + MER5A DNA MER1_type 8 110 -79 1913 160 0 16 chr2 239087318 239087630 -14168953 - AluJo SINE Alu -1 311 5 4384 162 17 15 chr2 239087729 239088416 -14168167 + L1MA8 LINE L1 5090 5774 -517 2241 123 0 0 chr2 239088416 239088718 -14167865 + AluSq SINE Alu 1 302 -11 4384 162 17 15 chr2 239088718 239088846 -14167737 + L1MA8 LINE L1 5774 5900 -391 2435 101 8 6 chr2 239088846 239089200 -14167383 + L1PA8 LINE L1 5814 6172 0 4384 162 17 15 chr2 239089200 239089382 -14167201 + L1MA8 LINE L1 5900 6090 -201 6493 86 8 13 chr2 239089392 239091146 -14165437 - L1PA10 LINE L1 -4 6164 4417 3870 123 17 5 chr2 239091146 239091747 -14164836 + L1PA10 LINE L1 3788 4395 -1746 925 148 32 56 chr2 239091747 239091842 -14164741 + L1MA8 LINE L1 6078 6174 -117 2094 137 22 33 chr2 239091842 239092208 -14164375 + THE1B LTR MaLR 1 362 -2 925 148 32 56 chr2 239092208 239092328 -14164255 + L1MA8 LINE L1 6174 6288 -3 1594 188 111 6 chr2 239092570 239092922 -14163661 + MLT1B LTR MaLR 2 390 0 384 300 70 53 chr2 239093611 239093838 -14162745 - MIR SINE MIR -30 232 2 2263 148 28 3 chr2 239095328 239095692 -14160891 - THE1C LTR MaLR -2 373 1 3009 323 54 38 chr2 239096206 239097769 -14158814 + ERVL LTR ERVL 753 2341 -3423 1582 299 35 30 chr2 239097982 239098575 -14158008 + ERVL LTR ERVL 2635 3230 -2534 258 303 83 0 chr2 239098577 239098686 -14157897 - HAL1 LINE L1 -2380 127 10 314 371 48 21 chr2 239098927 239099113 -14157470 + MIR SINE MIR 18 208 -54 24 32 0 0 chr2 239099604 239099635 -14156948 + AT_rich Low_complexity Low_complexity 1 31 0 724 315 72 15 chr2 239100122 239100368 -14156215 + LTR16A LTR ERVL 99 370 -80 2208 138 117 5 chr2 239100368 239100753 -14155830 + MSTA LTR MaLR 1 428 0 724 315 72 15 chr2 239100753 239100839 -14155744 + LTR16A LTR ERVL 370 450 0 1405 215 106 9 chr2 239102194 239102618 -14153965 + L1MB8 LINE L1 5713 6177 -1 1770 123 35 63 chr2 239103235 239103553 -14153030 - MER1B DNA MER1_type 0 339 31 189 107 0 0 chr2 239103593 239103621 -14152962 + (TC)n Simple_repeat Simple_repeat 1 28 0 2650 113 3 0 chr2 239103835 239104208 -14152375 + THE1C LTR MaLR 1 374 -1 39 74 0 0 chr2 239104240 239104321 -14152262 + AT_rich Low_complexity Low_complexity 1 81 0 1895 287 87 39 chr2 239104566 239105357 -14151226 + L2 LINE L2 1355 2183 -1131 1270 208 0 4 chr2 239105403 239105644 -14150939 - AluJo SINE Alu -57 255 16 607 235 207 10 chr2 239105661 239106179 -14150404 + LTR50 LTR ERVL 46 788 -7 1544 272 78 49 chr2 239106186 239106914 -14149669 + L2 LINE L2 2182 3031 -282 1769 158 53 73 chr2 239106914 239107312 -14149271 + MLT1B LTR MaLR 1 390 0 1544 272 78 49 chr2 239107312 239107326 -14149257 + L2 LINE L2 3031 3043 -270 991 202 25 10 chr2 239107385 239107583 -14149000 + MLT1B LTR MaLR 189 389 -1 221 229 37 101 chr2 239107585 239107694 -14148889 + L2 LINE L2 3028 3129 -184 849 244 160 23 chr2 239107749 239108132 -14148451 - MLT1J2 LTR MaLR -1 445 18 577 274 7 7 chr2 239108165 239108311 -14148272 + L2 LINE L2 3168 3313 0 268 291 94 0 chr2 239108664 239108791 -14147792 - MIR SINE MIR -6 256 118 448 293 126 73 chr2 239108848 239109370 -14147213 - L1M4 LINE L1 -1720 4426 3877 702 301 32 5 chr2 239109412 239109628 -14146955 + MLT1L LTR MaLR 45 266 -349 274 339 110 17 chr2 239109864 239110165 -14146418 - L1M4 LINE L1 -2298 3848 3520 15241 97 9 1 chr2 239111204 239114159 -14142424 - L1PA7 LINE L1 0 6154 3166 2631 248 38 15 chr2 239114160 239115033 -14141550 + L1M3e LINE L1 911 1788 -4596 665 123 78 0 chr2 239115036 239115153 -14141430 + L1M3 LINE L1 5681 5806 -485 2295 188 14 62 chr2 239115265 239115862 -14140721 + L1MA10 LINE L1 5762 6334 0 23 0 0 0 chr2 239117687 239117710 -14138873 + AT_rich Low_complexity Low_complexity 1 23 0 508 255 55 28 chr2 239118697 239118842 -14137741 + MIR SINE MIR 10 158 -104 562 281 257 3 chr2 239118872 239119203 -14137380 + L2 LINE L2 2899 3313 0 547 252 51 73 chr2 239119797 239120031 -14136552 - MIR SINE MIR -12 250 22 703 342 36 0 chr2 239122744 239122966 -14133617 - MIR SINE MIR -20 242 13 258 316 251 10 chr2 239123103 239123394 -14133189 - L2 LINE L2 -117 3196 2836 * 674 335 113 27 chr2 239123389 239123875 -14132708 - L2 LINE L2 -383 2931 2404 22 0 0 0 chr2 239123972 239123994 -14132589 + AT_rich Low_complexity Low_complexity 1 22 0 1313 120 31 0 chr2 239124068 239124259 -14132324 + AluSg/x SINE Alu 113 309 -1 192 125 0 0 chr2 239124468 239124500 -14132083 + (CA)n Simple_repeat Simple_repeat 1 32 0 2225 103 0 0 chr2 239125049 239125375 -14131208 - AluSg SINE Alu 0 326 1 879 240 125 64 chr2 239126471 239126854 -14129729 - MLT1G LTR MaLR -85 505 106 241 287 84 30 chr2 239126899 239127031 -14129552 - MLT1G LTR MaLR -400 149 14 14391 29 0 1 chr2 239127216 239129719 -14126864 + L1PA4 LINE L1 3638 6154 -1 21 0 0 0 chr2 239129860 239129881 -14126702 + AT_rich Low_complexity Low_complexity 1 21 0 578 284 47 87 chr2 239131770 239132091 -14124492 - L2 LINE L2 0 3313 3006 3036 226 67 3 chr2 239132109 239132826 -14123757 + L1MB8 LINE L1 5379 6141 -37 972 308 189 14 chr2 239132916 239133498 -14123085 - L2 LINE L2 -343 2971 2288 2109 112 21 3 chr2 239133583 239133870 -14122713 + AluSx SINE Alu 1 292 -20 212 306 41 61 chr2 239134084 239134182 -14122401 - MIR SINE MIR -130 132 37 366 297 92 31 chr2 239136044 239136273 -14120310 + L2 LINE L2 2914 3156 -157 246 324 138 5 chr2 239136768 239136978 -14119605 + MER20B DNA MER1_type 543 780 -3 186 333 104 0 chr2 239137422 239137518 -14119065 + L2 LINE L2 2650 2755 -559 340 234 42 38 chr2 239138558 239138758 -14117825 + MLT1K LTR MaLR 356 586 -2 335 239 182 31 chr2 239138860 239139019 -14117564 - MIR SINE MIR -24 238 56 325 241 43 78 chr2 239139244 239139385 -14117198 + MIR SINE MIR 113 248 -14 225 0 0 0 chr2 239140598 239140623 -14115960 + (A)n Simple_repeat Simple_repeat 1 25 0 196 233 117 0 chr2 239140633 239140693 -14115890 + MIR SINE MIR 153 219 -43 29 0 0 0 chr2 239140731 239140760 -14115823 + AT_rich Low_complexity Low_complexity 1 29 0 206 318 9 18 chr2 239140761 239140871 -14115712 + (TAAA)n Simple_repeat Simple_repeat 4 112 0 228 318 16 40 chr2 239140891 239141017 -14115566 - MIR SINE MIR -21 241 119 2261 140 22 3 chr2 239141339 239141696 -14114887 - THE1B LTR MaLR 0 364 1 29 47 0 0 chr2 239142045 239142088 -14114495 + AT_rich Low_complexity Low_complexity 1 43 0 1045 197 184 51 chr2 239143792 239143980 -14112603 + MLT1C LTR MaLR 1 163 -304 444 51 0 0 chr2 239143980 239144039 -14112544 + (CA)n Simple_repeat Simple_repeat 2 60 0 1045 197 184 51 chr2 239144039 239144262 -14112321 + MLT1C LTR MaLR 163 467 0 237 220 83 83 chr2 239146560 239146692 -14109891 - L1ME LINE L1 -216 5905 5774 519 260 140 50 chr2 239146810 239147010 -14109573 - MIR SINE MIR -42 220 3 2141 124 0 0 chr2 239147989 239148301 -14108282 - AluSx SINE Alu 0 312 1 26 0 0 0 chr2 239148334 239148360 -14108223 + AT_rich Low_complexity Low_complexity 1 26 0 2146 133 38 16 chr2 239148510 239148877 -14107706 + THE1C LTR MaLR 1 375 0 1873 208 76 38 chr2 239148946 239149474 -14107109 + MLT1F1 LTR MaLR 12 559 -8 625 324 77 51 chr2 239149587 239150239 -14106344 - L1M4 LINE L1 -3342 2804 2136 26 30 0 0 chr2 239150799 239150832 -14105751 + AT_rich Low_complexity Low_complexity 1 33 0 362 342 7 26 chr2 239150833 239150985 -14105598 + L2 LINE L2 1313 1461 -1853 32 0 0 0 chr2 239151316 239151348 -14105235 + AT_rich Low_complexity Low_complexity 1 32 0 694 204 25 88 chr2 239151351 239151669 -14104914 + L1MC5 LINE L1 7611 7908 -53 1462 104 0 46 chr2 239153369 239153609 -14102974 - L1PB1 LINE L1 0 6151 5923 3908 149 34 56 chr2 239153996 239154839 -14101744 + L1MC3 LINE L1 6961 7785 0 595 186 9 35 chr2 239155307 239155420 -14101163 + FAM SINE Alu 48 157 -28 201 74 0 0 chr2 239155422 239155449 -14101134 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2018 130 3 3 chr2 239155609 239155908 -14100675 + AluSx SINE Alu 1 299 -13 1635 129 30 0 chr2 239155914 239156177 -14100406 - L1PB1 LINE L1 -461 5705 5435 2015 135 78 8 chr2 239156177 239156543 -14100040 + L1PA16 LINE L1 5762 6157 -9 2390 98 0 0 chr2 239156726 239157032 -14099551 + AluSg SINE Alu 5 310 0 22 35 0 0 chr2 239157034 239157063 -14099520 + AT_rich Low_complexity Low_complexity 1 29 0 1365 246 54 54 chr2 239157448 239157676 -14098907 - L1MC4 LINE L1 -7 8035 7808 1802 203 0 0 chr2 239157676 239157982 -14098601 - AluJb SINE Alu -6 306 1 1365 246 54 54 chr2 239157982 239158439 -14098144 - L1MC4 LINE L1 -233 7809 7350 400 263 98 75 chr2 239158864 239159222 -14097361 - HAL1b LINE L1 -706 642 277 1012 261 112 69 chr2 239159290 239159360 -14097223 - L1ME LINE L1 -4673 1407 1341 2512 101 46 0 chr2 239159360 239159708 -14096875 + THE1B LTR MaLR 1 364 0 1012 261 112 69 chr2 239159708 239160578 -14096005 - L1ME LINE L1 -4739 1341 400 250 132 0 0 chr2 239160578 239160616 -14095967 - tRNA-Phe-TTC tRNA tRNA -38 38 1 1012 261 112 69 chr2 239160616 239161029 -14095554 - L1ME LINE L1 -5680 400 6 26 0 0 0 chr2 239161186 239161212 -14095371 + AT_rich Low_complexity Low_complexity 1 26 0 282 332 112 5 chr2 239162179 239162375 -14094208 - ERVL LTR ERVL -3528 2236 2020 1553 114 0 17 chr2 239162920 239163156 -14093427 + L1PA8 LINE L1 5941 6172 0 293 189 54 14 chr2 239164434 239164508 -14092075 - LTR67 LTR ERVL -8 549 473 420 299 27 20 chr2 239165626 239165773 -14090810 - MIR SINE MIR -114 148 1 252 287 155 23 chr2 239165910 239166039 -14090544 - L3b LINE CR1 -229 1354 1209 205 186 23 0 chr2 239166191 239166234 -14090349 + (TG)n Simple_repeat Simple_repeat 2 45 0 2202 130 10 0 chr2 239166487 239166795 -14089788 + AluSx SINE Alu 1 311 -1 226 222 0 0 chr2 239168951 239169005 -14087578 + CT-rich Low_complexity Low_complexity 1 54 0 580 221 31 0 chr2 239169074 239169201 -14087382 + L1PA15 LINE L1 3533 3663 -2483 7789 186 13 14 chr2 239169253 239171765 -14084818 + L1PA15 LINE L1 3646 6165 0 1334 196 102 29 chr2 239171854 239172129 -14084454 - AluJo SINE Alu -17 295 1 7221 177 17 107 chr2 239172150 239174078 -14082505 - MER52A LTR ERV1 0 1755 1 225 170 21 0 chr2 239174488 239174535 -14082048 + Charlie4 DNA MER1_type 1879 1926 -35 1127 250 8 11 chr2 239174644 239174904 -14081679 + MER45C DNA AcHobo 1 259 -694 22 0 0 0 chr2 239175153 239175175 -14081408 + AT_rich Low_complexity Low_complexity 1 22 0 228 250 0 0 chr2 239175175 239175227 -14081356 - L1MC3 LINE L1 -44 7741 7690 793 251 32 76 chr2 239177667 239177918 -14078665 - MIR SINE MIR -10 252 13 3108 198 73 10 chr2 239177931 239178809 -14077774 - Charlie1a DNA MER1_type -9 1446 514 1797 152 35 43 chr2 239178809 239179185 -14077398 + THE1C LTR MaLR 1 373 -2 8537 155 12 41 chr2 239179190 239179540 -14077043 + THE1B-int LTR MaLR 4 363 -1217 2131 131 33 25 chr2 239179540 239179899 -14076684 + THE1B LTR MaLR 3 364 0 8537 155 12 41 chr2 239179899 239181173 -14075410 + THE1B-int LTR MaLR 363 1580 0 1669 161 72 31 chr2 239181173 239181533 -14075050 + THE1C LTR MaLR 1 375 0 569 227 20 27 chr2 239181592 239181742 -14074841 - Charlie1a DNA MER1_type -1032 423 275 870 205 0 6 chr2 239181743 239181899 -14074684 + AluJb SINE Alu 135 289 -23 298 113 50 12 chr2 239181900 239181980 -14074603 + (TA)n Simple_repeat Simple_repeat 1 83 0 1039 233 12 4 chr2 239182015 239182255 -14074328 - Charlie1a DNA MER1_type -1207 248 7 21 0 0 0 chr2 239182312 239182333 -14074250 + AT_rich Low_complexity Low_complexity 1 21 0 1448 213 27 9 chr2 239182382 239182710 -14073873 + MLT1A2 LTR MaLR 9 342 -32 2925 198 43 143 chr2 239182710 239184060 -14072523 - MLT1A2-int LTR MaLR -155 1216 2 1279 244 49 35 chr2 239184061 239184430 -14072153 - MLT1A2 LTR MaLR 0 374 1 222 193 35 18 chr2 239184473 239184530 -14072053 + (CATATA)n Simple_repeat Simple_repeat 2 59 0 302 316 60 12 chr2 239185167 239185335 -14071248 + L1M4 LINE L1 4906 5081 -1065 305 283 215 0 chr2 239185344 239185521 -14071062 - LTR33 LTR ERVL -306 215 1 1911 200 53 27 chr2 239185532 239185981 -14070602 + MLT1C LTR MaLR 7 467 0 433 165 122 9 chr2 239186165 239186280 -14070303 - MER69 DNA AcHobo -1080 146 19 23 33 0 0 chr2 239186293 239186323 -14070260 + AT_rich Low_complexity Low_complexity 1 30 0 21 57 0 0 chr2 239186426 239186461 -14070122 + AT_rich Low_complexity Low_complexity 1 35 0 844 233 47 0 chr2 239187388 239187560 -14069023 - MER5A DNA MER1_type -9 180 1 198 103 0 0 chr2 239188595 239188624 -14067959 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 682 300 76 5 chr2 239189000 239189223 -14067360 + MIR SINE MIR 24 262 0 289 298 21 64 chr2 239189311 239189452 -14067131 - MIR3 SINE MIR -9 199 65 273 286 133 19 chr2 239189590 239189695 -14066888 + MIR3 SINE MIR 86 202 -6 231 265 15 15 chr2 239190114 239190182 -14066401 - L2 LINE L2 0 3272 3205 185 308 135 10 chr2 239190401 239190505 -14066078 - L2 LINE L2 -348 2966 2850 24 32 0 0 chr2 239191026 239191057 -14065526 + AT_rich Low_complexity Low_complexity 1 31 0 205 251 171 31 chr2 239191882 239191991 -14064592 + MIR SINE MIR 37 162 -65 468 274 37 12 chr2 239192281 239192445 -14064138 + MIR SINE MIR 85 252 -10 202 384 96 9 chr2 239192874 239193093 -14063490 + MIR SINE MIR 25 262 0 1628 166 67 70 chr2 239194557 239194974 -14061609 + MLT1C LTR MaLR 1 416 -51 975 189 16 11 chr2 239194980 239195170 -14061413 - AluSg/x SINE Alu -1 311 121 268 189 0 0 chr2 239195170 239195223 -14061360 + MLT1C LTR MaLR 415 467 0 183 298 18 0 chr2 239195258 239195315 -14061268 - L2 LINE L2 -1 3271 3214 647 243 178 4 chr2 239195362 239195638 -14060945 + MER33 DNA MER1_type 1 324 0 591 289 24 0 chr2 239195874 239196040 -14060543 - MIR SINE MIR -12 250 81 32 0 0 23 chr2 239196091 239196105 -14060478 + AT_rich Low_complexity Low_complexity 1 14 -28 712 189 0 0 chr2 239196105 239196227 -14060356 + FLAM_C SINE Alu 2 123 -10 32 0 0 23 chr2 239196227 239196255 -14060328 + AT_rich Low_complexity Low_complexity 14 42 0 2021 94 65 0 chr2 239196343 239196619 -14059964 - AluSp SINE Alu -19 294 1 219 326 21 32 chr2 239197479 239197574 -14059009 + MIR SINE MIR 47 140 -68 1790 191 3 0 chr2 239199083 239199392 -14057191 + AluJb SINE Alu 1 310 -2 3815 141 19 1 chr2 239199404 239200080 -14056503 - L1MA8 LINE L1 -181 6110 5423 853 138 48 0 chr2 239200083 239200250 -14056333 + L1MA8 LINE L1 6115 6289 -2 1454 194 0 4 chr2 239200526 239200778 -14055805 + AluJb SINE Alu 41 291 -21 271 192 27 0 chr2 239200781 239200854 -14055729 + (TATATG)n Simple_repeat Simple_repeat 6 80 0 7206 30 3 0 chr2 239201556 239202479 -14054104 + L1PA4 LINE L1 5294 6219 0 230 320 30 39 chr2 239202967 239203170 -14053413 - L2 LINE L2 -12 3301 3101 346 254 105 40 chr2 239203494 239203686 -14052897 + MIR3 SINE MIR 10 212 -27 180 152 0 0 chr2 239204039 239204072 -14052511 + T-rich Low_complexity Low_complexity 1 33 0 206 295 0 0 chr2 239204865 239204926 -14051657 + (CA)n Simple_repeat Simple_repeat 1 61 0 1584 141 30 20 chr2 239208848 239209146 -14047437 - Tigger4(Zombi) DNA MER2_type 0 2731 2431 489 259 3 1 chr2 239209167 239209345 -14047238 + L1MB3 LINE L1 5154 5332 -814 965 125 30 18 chr2 239209345 239209513 -14047070 + L1PA16 LINE L1 5750 5919 -247 1297 153 40 8 chr2 239209710 239209959 -14046624 + L1PA16 LINE L1 5905 6161 -5 4076 163 25 38 chr2 239210003 239210286 -14046297 + L1MB3 LINE L1 5317 5602 -581 2287 99 3 0 chr2 239210286 239210580 -14046003 + AluSg SINE Alu 1 295 -15 4076 163 25 38 chr2 239210580 239211171 -14045412 + L1MB3 LINE L1 5602 6180 -3 2357 106 0 0 chr2 239211661 239211963 -14044620 + AluSg SINE Alu 1 302 -8 2089 130 7 7 chr2 239212001 239212344 -14044239 + AluSx SINE Alu 1 343 0 2109 62 4 7 chr2 239214143 239214419 -14042164 + L1PA7 LINE L1 5880 6154 0 719 232 155 5 chr2 239215006 239215213 -14041370 - MIR SINE MIR -3 259 22 1638 187 22 19 chr2 239215793 239216157 -14040426 + MLT2D LTR ERVL 2 366 -48 202 200 0 0 chr2 239216157 239216192 -14040391 + CT-rich Low_complexity Low_complexity 3 37 0 306 0 0 0 chr2 239216232 239216266 -14040317 + (TG)n Simple_repeat Simple_repeat 1 34 0 217 317 17 50 chr2 239216268 239216388 -14040195 - MIR3 SINE MIR -50 158 43 1916 142 3 0 chr2 239217194 239217500 -14039083 + AluSg SINE Alu 1 307 0 24 91 0 0 chr2 239217929 239217995 -14038588 + AT_rich Low_complexity Low_complexity 1 66 0 1664 179 35 6 chr2 239218920 239219260 -14037323 + L1MD2 LINE L1 5647 5996 -363 625 143 86 29 chr2 239219262 239219471 -14037112 + Charlie2 DNA MER1_type 2271 2491 -371 899 178 110 3 chr2 239219998 239220290 -14036293 + Charlie2 DNA MER1_type 2474 2796 -66 1281 261 50 7 chr2 239220391 239220851 -14035732 + L1MC4 LINE L1 5403 5882 -1926 1026 90 0 0 chr2 239220862 239220995 -14035588 + AluSq/x SINE Alu 1 133 -179 278 158 0 18 chr2 239220997 239221083 -14035500 + Alu SINE Alu 235 302 0 3695 245 103 41 chr2 239221086 239223051 -14033532 + L1MC4 LINE L1 5917 8042 0 198 127 18 36 chr2 239223678 239223733 -14032850 + GA-rich Low_complexity Low_complexity 1 54 0 2221 115 0 0 chr2 239223735 239224031 -14032552 - AluSx SINE Alu -16 296 1 22 0 0 0 chr2 239225658 239225680 -14030903 + AT_rich Low_complexity Low_complexity 1 22 0 2085 141 0 3 chr2 239225688 239225979 -14030604 - AluSx SINE Alu -21 291 2 438 20 0 0 chr2 239227073 239227124 -14029459 + (TG)n Simple_repeat Simple_repeat 1 51 0 24 0 0 0 chr2 239227301 239227325 -14029258 + AT_rich Low_complexity Low_complexity 1 24 0 543 223 80 44 chr2 239228305 239228499 -14028084 - MIR SINE MIR 0 262 64 428 278 97 64 chr2 239229754 239230114 -14026469 - L1MC/D LINE L1 -473 5648 5275 291 296 0 0 chr2 239230636 239230717 -14025866 + (TA)n Simple_repeat Simple_repeat 1 81 0 1984 142 0 7 chr2 239232062 239232358 -14024225 - AluSx SINE Alu -13 299 6 420 248 18 35 chr2 239234087 239234200 -14022383 - L2 LINE L2 0 3313 3203 268 259 14 95 chr2 239235282 239235429 -14021154 + LTR37A LTR ERV1 4 138 -288 625 206 19 48 chr2 239235464 239235673 -14020910 + LTR37A LTR ERV1 224 426 0 270 306 51 9 chr2 239236606 239236716 -14019867 - MIR SINE MIR -45 163 49 280 79 0 175 chr2 239237039 239237102 -14019481 + MLT1F LTR MaLR 491 542 0 38 0 0 0 chr2 239237318 239237356 -14019227 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr2 239237756 239237778 -14018805 + AT_rich Low_complexity Low_complexity 1 22 0 2024 111 3 60 chr2 239237881 239238197 -14018386 + AluSx SINE Alu 1 298 -14 188 271 0 42 chr2 239239469 239239517 -14017066 + L2 LINE L2 3157 3202 -70 333 329 113 36 chr2 239240119 239240341 -14016242 - MIR SINE MIR -19 243 5 437 269 112 15 chr2 239240519 239240653 -14015930 - L2 LINE L2 -3 3310 3164 12916 184 22 19 chr2 239240718 239244633 -14011950 - L1MA7 LINE L1 0 6291 2367 369 345 35 30 chr2 239244822 239245022 -14011561 - L2 LINE L2 -562 2752 2552 220 195 0 0 chr2 239246260 239246301 -14010282 + (CA)n Simple_repeat Simple_repeat 2 42 0 180 0 0 0 chr2 239246438 239246458 -14010125 + (A)n Simple_repeat Simple_repeat 1 20 0 595 356 101 8 chr2 239246926 239247173 -14009410 - L2 LINE L2 -18 3254 2985 2351 118 25 8 chr2 239247678 239248043 -14008540 - THE1C LTR MaLR -4 371 1 203 290 112 71 chr2 239248551 239248720 -14007863 + L2 LINE L2 2914 3089 -183 261 255 106 57 chr2 239249472 239249613 -14006970 - MIR SINE MIR -73 189 42 324 0 0 0 chr2 239249869 239249905 -14006678 + (TG)n Simple_repeat Simple_repeat 1 36 0 203 235 148 37 chr2 239250727 239250808 -14005775 - L2 LINE L2 -15 3257 3168 686 268 75 0 chr2 239250973 239251186 -14005397 + MIR SINE MIR 34 262 0 1171 219 119 24 chr2 239251270 239251649 -14004934 - LTR52 LTR ERVL -5 416 2 21 0 0 0 chr2 239251766 239251787 -14004796 + AT_rich Low_complexity Low_complexity 1 21 0 532 218 57 8 chr2 239252130 239252254 -14004329 - MIR SINE MIR -10 252 123 22 0 0 0 chr2 239252903 239252925 -14003658 + AT_rich Low_complexity Low_complexity 1 22 0 2205 127 0 3 chr2 239253032 239253340 -14003243 + AluSg SINE Alu 1 307 -3 2484 67 0 0 chr2 239253750 239254050 -14002533 - AluY SINE Alu -11 300 1 1504 187 36 31 chr2 239255685 239256044 -14000539 - MER47A DNA MER2_type -5 361 1 502 285 39 34 chr2 239256757 239256936 -13999647 + MER5A DNA MER1_type 10 189 0 10196 105 11 10 chr2 239257122 239259434 -13997149 - L1PA7 LINE L1 -3 6151 3839 24 0 0 0 chr2 239260086 239260110 -13996473 + AT_rich Low_complexity Low_complexity 1 24 0 350 333 79 74 chr2 239260999 239261456 -13995127 + L2 LINE L2 2809 3267 -5 2405 140 18 42 chr2 239261460 239261916 -13994667 + MER65A LTR ERV1 1 445 0 502 322 94 3 chr2 239262550 239262836 -13993747 + HsTC2 DNA Tc2 514 825 -1073 1967 234 64 26 chr2 239263118 239263664 -13992919 + MLT1E2 LTR MaLR 52 618 -8 183 355 57 16 chr2 239266089 239266213 -13990370 + L2 LINE L2 3185 3313 0 21 36 0 0 chr2 239266645 239266673 -13989910 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr2 239266819 239266848 -13989735 + AT_rich Low_complexity Low_complexity 1 29 0 2100 167 3 3 chr2 239266898 239267264 -13989319 - MER47A DNA MER2_type 0 366 1 252 0 0 0 chr2 239267636 239267664 -13988919 + (CA)n Simple_repeat Simple_repeat 2 29 0 777 235 51 41 chr2 239268032 239268326 -13988257 + L1ME3A LINE L1 5864 6160 -10 214 234 125 0 chr2 239268995 239269059 -13987524 - L2 LINE L2 -1 3271 3200 212 197 0 33 chr2 239269134 239269195 -13987388 + GA-rich Low_complexity Low_complexity 3 61 0 281 185 0 19 chr2 239271516 239271570 -13985013 - L2 LINE L2 -4 3309 3257 24 77 0 0 chr2 239271921 239271973 -13984610 + AT_rich Low_complexity Low_complexity 1 52 0 1470 199 109 6 chr2 239272147 239272478 -13984105 + MLT1A1 LTR MaLR 1 365 0 194 364 56 35 chr2 239272919 239273117 -13983466 - L2 LINE L2 -5 3267 3066 1950 143 30 0 chr2 239273848 239274149 -13982434 - AluSx SINE Alu -2 310 1 4888 187 27 15 chr2 239274332 239275504 -13981079 + L1 LINE L1 3800 4985 -1161 326 161 0 43 chr2 239275508 239275601 -13980982 + L1 LINE L1 5221 5309 -837 240 307 91 57 chr2 239275630 239275806 -13980777 - MIR SINE MIR -14 248 67 211 274 60 12 chr2 239278940 239279024 -13977559 + MIR3 SINE MIR 91 178 -30 238 103 26 0 chr2 239279111 239279150 -13977433 + MER103 DNA DNA 48 87 -79 1562 198 19 27 chr2 239280602 239280970 -13975613 + MLT1A1 LTR MaLR 1 365 0 1079 44 22 0 chr2 239281947 239282082 -13974501 - L1PA10 LINE L1 0 6168 6031 652 322 39 4 chr2 239282233 239282466 -13974117 - MIR SINE MIR -2 260 20 1076 253 68 46 chr2 239282523 239282961 -13973622 + MLT1D LTR MaLR 1 448 -57 359 182 0 0 chr2 239283056 239283122 -13973461 + MLT1D LTR MaLR 435 500 -5 430 310 114 18 chr2 239283875 239284269 -13972314 + MLT1J2 LTR MaLR 1 432 -18 2383 85 0 7 chr2 239284297 239284602 -13971981 - AluSg1 SINE Alu -6 303 1 327 333 68 0 chr2 239285463 239285580 -13971003 + MIR SINE MIR 108 232 -30 316 220 184 9 chr2 239286366 239286475 -13970108 - MIR SINE MIR -35 227 100 2355 94 7 3 chr2 239286523 239286832 -13969751 + AluY SINE Alu 1 310 -1 1796 199 17 22 chr2 239287159 239287521 -13969062 + MLT1A1 LTR MaLR 6 365 0 1379 192 53 66 chr2 239287571 239288039 -13968544 + MLT1C LTR MaLR 6 467 0 195 42 0 0 chr2 239288229 239288253 -13968330 + (A)n Simple_repeat Simple_repeat 1 24 0 435 240 213 13 chr2 239288492 239288642 -13967941 + MER5A DNA MER1_type 9 188 -1 396 333 25 25 chr2 239289238 239289400 -13967183 - L2 LINE L2 -201 3071 2910 2197 120 42 33 chr2 239291603 239291962 -13964621 + THE1B LTR MaLR 3 364 0 2022 116 3 0 chr2 239293204 239293510 -13963073 - AluSx SINE Alu 0 307 1 187 329 41 0 chr2 239293931 239294004 -13962579 + MIR3 SINE MIR 127 202 -6 258 56 0 0 chr2 239294112 239294148 -13962435 + (TA)n Simple_repeat Simple_repeat 1 36 0 276 300 0 0 chr2 239294155 239294245 -13962338 + L1MC4 LINE L1 6614 6703 -1339 369 131 0 0 chr2 239294288 239294349 -13962234 + (TG)n Simple_repeat Simple_repeat 2 62 0 382 256 48 56 chr2 239294356 239294481 -13962102 - MIR SINE MIR -123 139 16 1296 179 91 49 chr2 239294518 239294826 -13961757 + MLT2D LTR ERVL 2 322 -92 531 45 0 0 chr2 239294827 239294893 -13961690 + (TC)n Simple_repeat Simple_repeat 1 66 0 292 77 39 0 chr2 239294893 239294945 -13961638 + (CA)n Simple_repeat Simple_repeat 1 54 0 217 221 110 83 chr2 239295087 239295232 -13961351 + L2 LINE L2 2603 2751 -563 217 313 38 25 chr2 239295469 239295549 -13961034 + L2 LINE L2 3106 3186 -86 201 74 0 0 chr2 239295870 239295897 -13960686 + (TTAGGG)n Simple_repeat Simple_repeat 2 28 0 1149 157 11 0 chr2 239295950 239296128 -13960455 + AluJo SINE Alu 1 180 -132 306 225 0 0 chr2 239296128 239296208 -13960375 + A-rich Low_complexity Low_complexity 1 80 0 24 53 0 0 chr2 239296647 239296685 -13959898 + AT_rich Low_complexity Low_complexity 1 38 0 2112 70 0 26 chr2 239296691 239296964 -13959619 + AluY SINE Alu 28 293 -18 2677 107 0 6 chr2 239297152 239297518 -13959065 + THE1B LTR MaLR 1 364 0 601 303 89 102 chr2 239297519 239298849 -13957734 + L2 LINE L2 2014 3309 -4 213 370 12 0 chr2 239299175 239299256 -13957327 + MIR SINE MIR 58 139 -123 230 56 28 0 chr2 239299547 239299583 -13957000 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 207 296 225 7 chr2 239299935 239300077 -13956506 - MIR SINE MIR -50 212 40 1746 227 53 25 chr2 239300392 239300841 -13955742 + MLT2B1 LTR ERVL 1 462 -58 2358 167 16 25 chr2 239300879 239301317 -13955266 - Tigger2a DNA MER2_type 0 434 1 233 86 69 0 chr2 239301319 239301377 -13955206 + (TA)n Simple_repeat Simple_repeat 1 62 0 2106 171 42 27 chr2 239301397 239301847 -13954736 + MSTB2 LTR MaLR 1 457 0 304 106 0 0 chr2 239301865 239301912 -13954671 + MLT2B1 LTR ERVL 474 520 0 336 267 52 26 chr2 239302157 239302273 -13954310 + MIR3 SINE MIR 47 165 -43 839 301 46 18 chr2 239302450 239302779 -13953804 - L2 LINE L2 -1 3312 2975 4421 177 24 7 chr2 239303718 239304673 -13951910 - L1MB7 LINE L1 0 6184 5217 990 264 27 9 chr2 239305807 239306124 -13950459 + MLT1I LTR MaLR 81 450 0 958 259 97 23 chr2 239307542 239307935 -13948648 - MLT1J2 LTR MaLR -2 448 27 207 200 146 0 chr2 239307962 239308017 -13948566 + MIR SINE MIR 102 164 -98 769 220 40 0 chr2 239308290 239308463 -13948120 - MER20 DNA MER1_type 0 219 40 209 200 0 0 chr2 239308569 239308614 -13947969 + (TCTG)n Simple_repeat Simple_repeat 2 46 0 328 309 100 59 chr2 239309397 239309509 -13947074 - MIR SINE MIR -5 257 151 1753 74 35 0 chr2 239309509 239309797 -13946786 + L1MA1 LINE L1 6034 6330 0 328 309 100 59 chr2 239309797 239309902 -13946681 - MIR SINE MIR -111 151 29 1678 61 0 0 chr2 239309958 239310156 -13946427 + AluY SINE Alu 101 298 -13 23 0 0 0 chr2 239311171 239311194 -13945389 + AT_rich Low_complexity Low_complexity 1 23 0 228 359 29 10 chr2 239311241 239311344 -13945239 - L2 LINE L2 -1996 1318 1214 240 253 192 40 chr2 239311364 239311463 -13945120 + L2 LINE L2 3133 3246 -26 1484 175 129 8 chr2 239311527 239311889 -13944694 - MLT1C LTR MaLR -58 407 1 2252 131 0 0 chr2 239311922 239312256 -13944327 - AluSx SINE Alu 0 334 1 716 162 33 149 chr2 239314452 239314507 -13942076 - MER20 DNA MER1_type -3 216 156 1247 32 0 13 chr2 239314507 239314663 -13941920 - L1PA4 LINE L1 -1 6154 6001 716 162 33 149 chr2 239314663 239314848 -13941735 - MER20 DNA MER1_type -63 156 4 2129 113 0 29 chr2 239314957 239315267 -13941316 - AluSg SINE Alu -9 301 1 313 306 59 21 chr2 239315271 239315457 -13941126 - L1ME4a LINE L1 -1 6120 5928 355 333 0 24 chr2 239315690 239315858 -13940725 + GA-rich Low_complexity Low_complexity 3 166 0 634 147 0 0 chr2 239316077 239316186 -13940397 + L1MB5 LINE L1 5854 5962 -212 1280 280 96 50 chr2 239316631 239317196 -13939387 + MLT1E LTR MaLR 3 593 0 1356 0 35 0 chr2 239319706 239319875 -13936708 + (GAAA)n Simple_repeat Simple_repeat 3 177 0 1182 281 89 15 chr2 239320811 239321408 -13935175 + Charlie7 DNA MER1_type 7 647 -1965 23 0 0 0 chr2 239321531 239321554 -13935029 + AT_rich Low_complexity Low_complexity 1 23 0 6837 25 0 0 chr2 239323291 239324082 -13932501 + L1PA3 LINE L1 5362 6152 -3 644 257 134 70 chr2 239324190 239324341 -13932242 + HAL1 LINE L1 1310 1450 -1057 1829 150 92 11 chr2 239324341 239324688 -13931895 + THE1C LTR MaLR 1 375 0 644 257 134 70 chr2 239324688 239325209 -13931374 + HAL1 LINE L1 1450 2025 -482 382 321 75 44 chr2 239325369 239325621 -13930962 + HAL1 LINE L1 2248 2507 0 360 64 0 0 chr2 239325868 239325915 -13930668 + (TA)n Simple_repeat Simple_repeat 2 48 0 1353 51 0 0 chr2 239326777 239326952 -13929631 - L1PA8 LINE L1 -296 5876 5702 2133 64 0 11 chr2 239326952 239327232 -13929351 + L1PA8 LINE L1 5891 6168 -4 243 0 0 0 chr2 239327251 239327278 -13929305 + (TG)n Simple_repeat Simple_repeat 2 28 0 1330 209 98 34 chr2 239327326 239327766 -13928817 + MLT1D LTR MaLR 1 468 -37 21 57 0 0 chr2 239328035 239328070 -13928513 + AT_rich Low_complexity Low_complexity 1 35 0 281 264 73 38 chr2 239328070 239328384 -13928199 - L1ME4a LINE L1 -8 6113 5789 419 240 0 8 chr2 239329404 239329525 -13927058 + GA-rich Low_complexity Low_complexity 3 122 0 30 69 0 0 chr2 239329756 239329814 -13926769 + AT_rich Low_complexity Low_complexity 1 58 0 1883 118 42 7 chr2 239330683 239331014 -13925569 + AluSx SINE Alu 1 341 0 687 299 5 9 chr2 239332016 239332227 -13924356 + MIR SINE MIR 22 231 -31 2551 53 0 0 chr2 239332293 239332595 -13923988 - AluY SINE Alu -9 302 1 301 303 101 42 chr2 239332952 239333071 -13923512 + MER5A DNA MER1_type 63 188 -1 243 297 137 32 chr2 239334879 239335160 -13921423 + L2 LINE L2 2694 3003 -310 215 264 0 0 chr2 239335256 239335309 -13921274 + L2 LINE L2 3261 3313 0 2432 71 0 22 chr2 239336010 239336321 -13920262 + AluY SINE Alu 1 304 -7 207 260 10 83 chr2 239337079 239337175 -13919408 + MIR SINE MIR 17 105 -103 1068 323 50 8 chr2 239337227 239337755 -13918828 + L2 LINE L2 2491 3050 -263 3941 214 66 20 chr2 239337814 239337912 -13918671 + MER45B DNA AcHobo 9 101 -1480 1995 104 0 0 chr2 239337912 239338171 -13918412 + AluSq SINE Alu 40 298 -15 3941 214 66 20 chr2 239338171 239339054 -13917529 + MER45B DNA AcHobo 101 1035 -5 610 234 58 49 chr2 239339071 239339297 -13917286 + L2 LINE L2 3085 3312 -1 2537 96 5 15 chr2 239339513 239339918 -13916665 + L1MA1 LINE L1 5855 6255 -47 1132 249 38 45 chr2 239340005 239340403 -13916180 + MLT2C1 LTR ERVL 3 397 0 223 216 181 69 chr2 239341237 239341353 -13915230 - L2 LINE L2 -4 3268 3140 547 261 48 65 chr2 239341910 239342201 -13914382 + MLT1K LTR MaLR 303 588 0 180 77 0 0 chr2 239344350 239344376 -13912207 + (GA)n Simple_repeat Simple_repeat 1 26 0 372 43 0 0 chr2 239344376 239344422 -13912161 + (TG)n Simple_repeat Simple_repeat 2 47 0 186 43 0 0 chr2 239344461 239344484 -13912099 + (CA)n Simple_repeat Simple_repeat 2 24 0 436 273 78 51 chr2 239344600 239344856 -13911727 + Charlie8 DNA MER1_type 23 285 -2132 305 239 0 0 chr2 239344907 239344978 -13911605 + Charlie8 DNA MER1_type 2347 2417 0 2310 245 71 32 chr2 239345305 239346043 -13910540 + L1ME2 LINE L1 37 814 -5582 1786 129 75 4 chr2 239346043 239346322 -13910261 + AluJo SINE Alu 1 299 -13 2310 245 71 32 chr2 239346322 239346445 -13910138 + L1ME2 LINE L1 814 931 -5465 776 203 23 62 chr2 239346448 239346704 -13909879 + L1ME2 LINE L1 4178 4423 -1792 1131 239 104 21 chr2 239346705 239347174 -13909409 + L1ME2 LINE L1 5724 6231 -2 676 222 46 102 chr2 239347434 239348568 -13908015 + L1MC3 LINE L1 6820 7807 -11 1331 250 102 47 chr2 239348734 239349811 -13906772 - L1MCc LINE L1 -4870 2071 945 571 266 29 55 chr2 239349811 239350123 -13906460 - L1MCc LINE L1 -6042 381 78 255 233 17 0 chr2 239350155 239350215 -13906368 - L1MCc LINE L1 -6338 85 25 494 258 8 8 chr2 239350537 239350657 -13905926 - MIR3 SINE MIR -7 201 82 303 296 92 41 chr2 239351178 239351374 -13905209 + HAL1b LINE L1 1143 1348 0 275 282 56 33 chr2 239352221 239352442 -13904141 + L2 LINE L2 3026 3313 0 1492 154 23 96 chr2 239353026 239353444 -13903139 - MLT1C LTR MaLR -24 443 55 2051 141 0 7 chr2 239353444 239353749 -13902834 - AluSq SINE Alu -1 312 10 1492 154 23 96 chr2 239353749 239353801 -13902782 - MLT1C LTR MaLR -412 55 1 286 312 13 0 chr2 239354276 239354353 -13902230 - L2 LINE L2 -61 3211 3134 663 237 58 81 chr2 239354517 239354825 -13901758 + LTR16C LTR ERVL 160 460 -31 449 169 65 24 chr2 239355254 239355378 -13901205 - MER106A DNA MER1_type 0 236 108 246 269 15 0 chr2 239355567 239355634 -13900949 + MLT1F LTR MaLR 5 72 -483 449 241 81 24 chr2 239355659 239355826 -13900757 + MLT1F LTR MaLR 215 357 -185 432 236 8 63 chr2 239355821 239355948 -13900635 + MLT1F LTR MaLR 476 595 0 * 186 71 0 0 chr2 239356885 239356913 -13899670 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 530 274 35 58 chr2 239357563 239357633 -13898950 + MIR SINE MIR 42 112 -150 2154 144 40 14 chr2 239357633 239357987 -13898596 - THE1B LTR MaLR 0 364 2 530 274 35 58 chr2 239357987 239358142 -13898441 + MIR SINE MIR 112 262 0 255 61 0 0 chr2 239358453 239358486 -13898097 + (CAT)n Simple_repeat Simple_repeat 3 35 0 346 289 66 30 chr2 239358538 239358704 -13897879 - MIR SINE MIR -62 200 29 27 0 0 0 chr2 239359384 239359411 -13897172 + AT_rich Low_complexity Low_complexity 1 27 0 607 262 50 0 chr2 239361209 239361350 -13895233 + MER5A DNA MER1_type 3 150 -39 976 87 0 0 chr2 239361364 239361502 -13895081 - HERVK LTR ERVK -5545 1698 1561 804 93 8 0 chr2 239361744 239361862 -13894721 + LTR5 LTR ERVK 851 969 0 181 355 135 20 chr2 239361912 239362112 -13894471 - L2 LINE L2 -221 3051 2829 2538 141 6 64 chr2 239362610 239363129 -13893454 + L1MC1 LINE L1 5840 6328 -5 942 284 167 6 chr2 239363214 239363699 -13892884 + L2 LINE L2 832 1394 -1920 1470 178 103 23 chr2 239363700 239364088 -13892495 + MLT1C LTR MaLR 2 420 -47 1465 242 19 64 chr2 239364092 239364575 -13892008 + MLT2B1 LTR ERVL 3 463 -57 305 198 10 83 chr2 239364604 239364700 -13891883 - L1MC4 LINE L1 -1340 6702 6614 233 44 0 186 chr2 239364705 239364818 -13891765 + (TA)n Simple_repeat Simple_repeat 2 93 0 351 50 0 195 chr2 239364873 239365094 -13891489 + (TA)n Simple_repeat Simple_repeat 2 179 0 458 56 0 176 chr2 239365190 239365570 -13891013 + (TA)n Simple_repeat Simple_repeat 1 313 0 368 82 5 118 chr2 239365621 239365816 -13890767 + (TA)n Simple_repeat Simple_repeat 1 173 0 263 93 69 84 chr2 239365819 239365889 -13890694 + MLT2B1 LTR ERVL 446 520 0 * 318 157 0 0 chr2 239365889 239365939 -13890644 + MLT1C LTR MaLR 418 467 0 1098 264 57 47 chr2 239365941 239366147 -13890436 + L2 LINE L2 1392 1594 -1720 2016 102 47 99 chr2 239366147 239366531 -13890052 - THE1B LTR MaLR 0 364 1 10971 94 53 0 chr2 239366531 239368032 -13888551 - THE1B-int LTR MaLR 0 1580 1 2197 113 51 20 chr2 239368032 239368385 -13888198 - THE1B LTR MaLR 0 364 1 1098 264 57 47 chr2 239368385 239368664 -13887919 + L2 LINE L2 1593 1884 -1430 220 272 116 13 chr2 239368841 239368942 -13887641 + MIR3 SINE MIR 79 191 -17 269 327 27 0 chr2 239369050 239369160 -13887423 + GA-rich Low_complexity Low_complexity 4 116 0 2459 89 0 3 chr2 239369181 239369494 -13887089 + AluSq SINE Alu 1 312 -1 351 323 65 24 chr2 239369846 239369970 -13886613 + MER91A DNA MER1_type 1 129 -67 2059 117 0 23 chr2 239370138 239370438 -13886145 + AluSq SINE Alu 1 293 -20 1166 258 63 21 chr2 239370539 239371012 -13885571 - MER113 DNA MER1_type? 0 521 29 482 266 58 31 chr2 239371570 239371796 -13884787 + MER106A DNA MER1_type 1 232 -4 629 189 147 32 chr2 239371803 239371993 -13884590 - MER20 DNA MER1_type -2 217 6 369 250 46 40 chr2 239373365 239373517 -13883066 + MIR SINE MIR 110 262 0 241 381 59 17 chr2 239373545 239373663 -13882920 - MIR3 SINE MIR -50 158 36 1904 276 42 22 chr2 239373734 239374278 -13882305 - MLT1H1 LTR MaLR 0 555 1 201 143 0 0 chr2 239374391 239374426 -13882157 + (TG)n Simple_repeat Simple_repeat 1 35 0 24 77 0 0 chr2 239374443 239374495 -13882088 + AT_rich Low_complexity Low_complexity 1 52 0 223 242 15 15 chr2 239375544 239375610 -13880973 + (TA)n Simple_repeat Simple_repeat 1 66 0 350 264 148 71 chr2 239375658 239375995 -13880588 - L1MC4a LINE L1 -1406 6402 6040 496 216 7 7 chr2 239376060 239376199 -13880384 + (CATA)n Simple_repeat Simple_repeat 2 140 0 272 289 58 0 chr2 239376439 239376560 -13880023 - L1MC4a LINE L1 -2025 5783 5656 429 323 43 18 chr2 239377388 239377552 -13879031 + MIR SINE MIR 21 188 -74 1568 292 103 71 chr2 239379103 239380234 -13876349 + L2 LINE L2 2153 3302 -11 305 173 0 0 chr2 239380451 239380503 -13876080 - L1MC4 LINE L1 -1339 6703 6652 277 28 0 0 chr2 239380922 239380958 -13875625 - MADE1 DNA Mariner -3 77 42 3919 181 16 9 chr2 239381826 239382598 -13873985 - L1MB3 LINE L1 0 6183 5407 21 0 0 0 chr2 239382784 239382805 -13873778 + AT_rich Low_complexity Low_complexity 1 21 0 1211 175 15 0 chr2 239384066 239384272 -13872311 + MER6B DNA MER2_type 2 210 0 225 235 29 0 chr2 239385898 239385966 -13870617 + (CATA)n Simple_repeat Simple_repeat 4 73 0 300 222 0 91 chr2 239385967 239386066 -13870517 - L1MC4 LINE L1 -1339 6703 6614 21 0 0 0 chr2 239386247 239386268 -13870315 + AT_rich Low_complexity Low_complexity 1 21 0 584 199 168 12 chr2 239387570 239387731 -13868852 - MER5A DNA MER1_type 0 189 4 331 318 106 34 chr2 239387947 239388183 -13868400 + MIR SINE MIR 4 256 -6 194 284 90 0 chr2 239388261 239388328 -13868255 + MIR SINE MIR 36 108 -154 265 256 0 26 chr2 239389299 239389377 -13867206 + CT-rich Low_complexity Low_complexity 1 76 0 195 204 0 0 chr2 239389510 239389554 -13867029 + GA-rich Low_complexity Low_complexity 6 49 0 307 355 17 47 chr2 239389678 239389977 -13866606 - MER102b DNA MER1_type -50 291 2 685 305 85 7 chr2 239389992 239390297 -13866286 + MLT1J2 LTR MaLR 1 329 -121 2259 77 3 46 chr2 239390956 239391280 -13865303 + AluY SINE Alu 1 310 -1 203 282 111 26 chr2 239393465 239393582 -13863001 - MIR SINE MIR -108 154 28 296 338 128 10 chr2 239393797 239393996 -13862587 + MIR SINE MIR 16 233 -29 405 306 86 24 chr2 239394820 239395029 -13861554 - MIR SINE MIR -28 234 13 200 116 70 0 chr2 239395467 239395510 -13861073 + T-rich Low_complexity Low_complexity 3 48 0 207 0 0 0 chr2 239395579 239395602 -13860981 + (CA)n Simple_repeat Simple_repeat 2 24 0 323 286 35 7 chr2 239395931 239396145 -13860438 - L1MC/D LINE L1 -803 5343 5219 26 30 0 0 chr2 239397592 239397625 -13858958 + AT_rich Low_complexity Low_complexity 1 33 0 254 95 48 0 chr2 239397686 239397728 -13858855 - L1ME2 LINE L1 -9 6155 6112 207 0 0 0 chr2 239399018 239399041 -13857542 + (A)n Simple_repeat Simple_repeat 1 23 0 2455 93 26 34 chr2 239399906 239400284 -13856299 - THE1C LTR MaLR 0 375 1 1490 172 69 19 chr2 239400284 239400545 -13856038 - AluJo SINE Alu -38 274 1 21 0 0 0 chr2 239400552 239400573 -13856010 + AT_rich Low_complexity Low_complexity 1 21 0 221 250 88 12 chr2 239400575 239400655 -13855928 - MIR SINE MIR -120 142 57 1174 208 5 0 chr2 239400750 239400957 -13855626 - AluJb SINE Alu -18 294 87 275 211 158 26 chr2 239400973 239401049 -13855534 - MIR SINE MIR -117 145 60 23 0 0 0 chr2 239401631 239401654 -13854929 + AT_rich Low_complexity Low_complexity 1 23 0 541 246 0 0 chr2 239401864 239401978 -13854605 - MER81 DNA DNA 0 114 1 1110 202 85 78 chr2 239403211 239403580 -13853003 + MLT2D LTR ERVL 1 375 -39 381 22 0 0 chr2 239403580 239403626 -13852957 + (CA)n Simple_repeat Simple_repeat 1 46 0 1110 202 85 78 chr2 239403626 239403667 -13852916 + MLT2D LTR ERVL 375 414 0 620 252 110 63 chr2 239403671 239404115 -13852468 - L1ME2 LINE L1 -339 5782 5316 209 343 121 18 chr2 239404325 239404491 -13852092 + MIR SINE MIR 8 190 -72 2158 161 0 0 chr2 239404511 239404872 -13851711 - L1PA16 LINE L1 -15 6151 5791 1275 128 5 0 chr2 239404872 239405076 -13851507 + L1P5 LINE L1 5460 5664 -492 26 30 0 0 chr2 239405226 239405259 -13851324 + AT_rich Low_complexity Low_complexity 1 33 0 225 303 97 55 chr2 239405573 239405718 -13850865 + MIR SINE MIR 47 197 -65 319 349 34 7 chr2 239405829 239405975 -13850608 + MIR SINE MIR 6 152 -56 573 280 125 40 chr2 239406093 239406333 -13850250 + LTR33 LTR ERVL 80 369 -152 2395 125 3 29 chr2 239406333 239406718 -13849865 - THE1C LTR MaLR 0 375 1 573 280 125 40 chr2 239406718 239406877 -13849706 + LTR33 LTR ERVL 369 513 -8 920 186 25 29 chr2 239407921 239408125 -13848458 - MER3 DNA MER1_type -6 203 1 1774 189 30 0 chr2 239408427 239408760 -13847823 - MER2 DNA MER2_type -1 343 1 281 292 44 0 chr2 239408769 239408882 -13847701 + MLT1L LTR MaLR 359 476 -139 1385 172 4 17 chr2 239410145 239410377 -13846206 + AluJb SINE Alu 71 299 -13 206 152 0 22 chr2 239411005 239411051 -13845532 + GA-rich Low_complexity Low_complexity 2 46 0 236 238 48 9 chr2 239411508 239411613 -13844970 + (TA)n Simple_repeat Simple_repeat 2 110 0 338 354 104 5 chr2 239412191 239412383 -13844200 - MIR SINE MIR -23 239 29 1108 207 43 72 chr2 239412568 239412866 -13843717 - MLT1A1 LTR MaLR 0 365 79 2351 95 0 29 chr2 239412866 239413182 -13843401 + AluY SINE Alu 1 307 -4 1108 207 43 72 chr2 239413182 239413259 -13843324 - MLT1A1 LTR MaLR -286 79 1 197 237 17 0 chr2 239413372 239413431 -13843152 + (TATG)n Simple_repeat Simple_repeat 3 62 0 314 300 22 0 chr2 239413488 239413578 -13843005 + L1MC4 LINE L1 6613 6704 -1338 2373 103 0 0 chr2 239414215 239414516 -13842067 - AluSx SINE Alu -11 301 1 1290 214 70 35 chr2 239415007 239415381 -13841202 + MLT1D LTR MaLR 116 502 -3 385 298 0 8 chr2 239417209 239417333 -13839250 - 7SK RNA RNA -70 123 1 303 290 21 31 chr2 239417530 239417698 -13838885 + MER58A DNA MER1_type 4 173 0 411 21 0 0 chr2 239417702 239417750 -13838833 + (CA)n Simple_repeat Simple_repeat 2 49 0 180 327 124 0 chr2 239419548 239419661 -13836922 + MIR SINE MIR 58 184 -78 875 217 22 0 chr2 239419837 239420017 -13836566 - MER5A DNA MER1_type -5 184 1 305 200 0 0 chr2 239421093 239421153 -13835430 - MER103 DNA DNA -88 78 19 1091 266 74 43 chr2 239421190 239422085 -13834498 - L1ME LINE L1 -4636 1444 520 578 184 7 71 chr2 239422734 239422895 -13833688 - FLAM_C SINE Alu 0 153 2 2530 112 5 14 chr2 239423717 239424084 -13832499 - THE1B LTR MaLR 0 364 1 372 273 254 0 chr2 239424148 239424313 -13832270 + L2 LINE L2 3107 3313 0 522 263 42 14 chr2 239426402 239426598 -13829985 - MIR SINE MIR -56 206 2 421 255 7 21 chr2 239427877 239428018 -13828565 - MLT1J LTR MaLR 0 511 373 203 308 31 0 chr2 239428363 239428428 -13828155 - L2 LINE L2 -7 3306 3240 193 164 0 33 chr2 239428662 239428723 -13827860 + CT-rich Low_complexity Low_complexity 1 59 0 528 179 0 9 chr2 239428757 239428863 -13827720 - L1MC4 LINE L1 -155 7887 7783 1899 231 127 32 chr2 239428906 239429630 -13826953 - L1MC4 LINE L1 -365 7677 6885 21 0 0 0 chr2 239430147 239430168 -13826415 + AT_rich Low_complexity Low_complexity 1 21 0 269 80 0 60 chr2 239432669 239432719 -13823864 + (A)n Simple_repeat Simple_repeat 1 47 0 21 0 0 0 chr2 239434316 239434337 -13822246 + AT_rich Low_complexity Low_complexity 1 21 0 375 81 32 16 chr2 239434557 239434619 -13821964 - LTR67 LTR ERVL 0 557 495 198 0 0 0 chr2 239435000 239435022 -13821561 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 351 350 79 19 chr2 239436834 239437151 -13819432 - MER102b DNA MER1_type -2 339 4 288 297 27 0 chr2 239437221 239437332 -13819251 - MER103 DNA DNA -42 124 11 365 344 41 28 chr2 239437506 239437724 -13818859 - MIR SINE MIR -31 231 11 229 258 161 16 chr2 239439195 239439257 -13817326 + L2 LINE L2 3166 3236 -36 274 236 104 56 chr2 239439277 239439314 -13817269 - L1MA10 LINE L1 -3 6331 6295 312 233 49 68 chr2 239439314 239439385 -13817198 - L1ME1 LINE L1 -46 6120 6049 1901 27 0 18 chr2 239439385 239439608 -13816975 + AluY SINE Alu 85 303 -8 312 233 49 68 chr2 239439608 239439699 -13816884 - L1ME1 LINE L1 -117 6049 5961 1080 182 79 142 chr2 239439704 239440440 -13816143 - L1ME1 LINE L1 -611 5555 4885 1524 184 31 15 chr2 239440457 239440783 -13815800 + MLT1A1 LTR MaLR 35 365 0 310 323 20 57 chr2 239440888 239441136 -13815447 + L1MC/D LINE L1 5605 5843 -1965 320 250 21 10 chr2 239441190 239441286 -13815297 + L1MCa LINE L1 1995 2091 -4335 198 0 0 0 chr2 239441542 239441564 -13815019 + (T)n Simple_repeat Simple_repeat 1 22 0 1650 205 149 10 chr2 239441629 239442039 -13814544 + MLT1C LTR MaLR 1 467 0 183 286 0 20 chr2 239443012 239443061 -13813522 + L2 LINE L2 3006 3053 -219 1844 209 35 17 chr2 239443329 239443788 -13812795 - MLT1C LTR MaLR 0 467 1 233 297 16 0 chr2 239444510 239444574 -13812009 + MIR SINE MIR 9 73 -189 210 326 70 0 chr2 239445512 239445598 -13810985 + L2 LINE L2 3152 3243 -29 246 317 98 0 chr2 239445750 239445832 -13810751 - MIR SINE MIR -116 146 57 511 279 106 13 chr2 239447327 239447564 -13809019 + MIR SINE MIR 2 260 -2 225 0 0 0 chr2 239451368 239451393 -13805190 + (A)n Simple_repeat Simple_repeat 1 25 0 29 78 0 0 chr2 239452012 239452076 -13804507 + GC_rich Low_complexity Low_complexity 1 64 0 29 28 0 0 chr2 239452095 239452131 -13804452 + GC_rich Low_complexity Low_complexity 1 36 0 206 277 0 0 chr2 239452254 239452319 -13804264 + G-rich Low_complexity Low_complexity 2 66 0 192 222 19 19 chr2 239452363 239452417 -13804166 - L2 LINE L2 -5 3267 3214 333 310 63 83 chr2 239452428 239452728 -13803855 - L2 LINE L2 0 3272 2979 357 297 34 17 chr2 239452951 239453069 -13803514 - MIR SINE MIR -78 184 65 498 300 63 20 chr2 239455259 239455481 -13801102 + MIR SINE MIR 24 261 -1 1475 183 65 38 chr2 239455648 239455938 -13800645 - AluJb SINE Alu -14 298 1 1249 206 82 69 chr2 239456272 239456810 -13799773 + MLT1H LTR MaLR 3 547 -2 297 128 0 0 chr2 239457700 239457747 -13798836 + MER91 DNA MER1_type 94 140 0 460 297 49 64 chr2 239458055 239458382 -13798201 + LTR16A LTR ERVL 1 322 -128 933 313 55 29 chr2 239458455 239459002 -13797581 + HERV16 LTR ERVL 100 660 -4336 1533 221 29 13 chr2 239459065 239459517 -13797066 + L1ME1 LINE L1 2636 3094 -3052 1674 206 26 3 chr2 239459527 239459872 -13796711 + L1ME1 LINE L1 5518 5870 -296 5196 90 1 12 chr2 239459881 239460655 -13795928 + L1PA10 LINE L1 5388 6153 -15 987 194 63 95 chr2 239460658 239460973 -13795610 + L1ME1 LINE L1 5853 6157 -9 23 0 0 0 chr2 239460976 239460999 -13795584 + AT_rich Low_complexity Low_complexity 1 23 0 298 336 25 48 chr2 239461012 239461366 -13795217 + ERVL LTR ERVL 4970 5315 -449 630 276 25 0 chr2 239462137 239462300 -13794283 + MIR3 SINE MIR 37 203 -5 363 78 234 0 chr2 239463094 239463158 -13793425 - MADE1 DNA Mariner -1 79 1 246 98 24 0 chr2 239463170 239463211 -13793372 + MADE1 DNA Mariner 36 77 -3 837 267 17 17 chr2 239463221 239463461 -13793122 - MIR SINE MIR -19 243 4 261 285 211 8 chr2 239463472 239463595 -13792988 - MIR3 SINE MIR -10 198 51 504 300 113 17 chr2 239463623 239463853 -13792730 - MIR SINE MIR 0 262 11 396 288 121 23 chr2 239464177 239464441 -13792142 - L1ME LINE L1 -501 5620 5331 314 304 88 44 chr2 239464863 239465090 -13791493 - L1ME LINE L1 -3316 2830 2594 23 78 0 0 chr2 239465448 239465499 -13791084 + AT_rich Low_complexity Low_complexity 1 51 0 22 0 0 0 chr2 239465577 239465599 -13790984 + AT_rich Low_complexity Low_complexity 1 22 0 486 358 57 21 chr2 239465819 239466154 -13790429 + L1MC5 LINE L1 4712 5058 -1088 24 32 0 0 chr2 239466184 239466215 -13790368 + AT_rich Low_complexity Low_complexity 1 31 0 1894 260 55 9 chr2 239466335 239466969 -13789614 + L1MC5 LINE L1 5254 5916 -1892 685 159 32 19 chr2 239466992 239467149 -13789434 + L1MA9 LINE L1 6152 6310 -2 503 223 112 25 chr2 239467165 239467362 -13789221 + L1MC5 LINE L1 7015 7228 -733 695 206 52 5 chr2 239467564 239467758 -13788825 + MER33 DNA MER1_type 43 245 -79 736 202 29 6 chr2 239467758 239467931 -13788652 + L1ME LINE L1 5538 5714 -452 302 154 319 0 chr2 239467930 239468021 -13788562 + L1MA10 LINE L1 6190 6309 -25 * 462 174 35 9 chr2 239468025 239468140 -13788443 + MER33 DNA MER1_type 207 324 0 394 273 31 0 chr2 239468141 239468269 -13788314 + L1MC5 LINE L1 7331 7462 -499 723 158 153 15 chr2 239469101 239469297 -13787286 + MER5C DNA MER1_type 60 282 -42 396 40 0 0 chr2 239469388 239469438 -13787145 + HERVK11D LTR ERVK 7703 7752 0 6251 36 30 0 chr2 239469438 239470214 -13786369 + MER11D LTR ERVK 1 799 -98 207 0 0 0 chr2 239470214 239470237 -13786346 + (A)n Simple_repeat Simple_repeat 1 23 0 203 81 0 54 chr2 239470240 239470277 -13786306 - MER5A DNA MER1_type -40 149 115 * 284 246 33 0 chr2 239470245 239470306 -13786277 + MER5A DNA MER1_type 55 117 -72 2905 140 41 13 chr2 239470370 239470455 -13786128 - L1MA8 LINE L1 -73 6218 6137 2110 115 0 26 chr2 239470455 239470759 -13785824 - AluSx SINE Alu -15 297 2 2905 140 41 13 chr2 239470759 239471229 -13785354 - L1MA8 LINE L1 -154 6137 5647 7560 116 23 27 chr2 239471229 239472382 -13784201 + HSMAR2 DNA Mariner 3 1152 -150 2243 110 3 19 chr2 239472382 239472690 -13783893 - AluSq SINE Alu -10 303 1 7560 116 23 27 chr2 239472690 239472802 -13783781 + HSMAR2 DNA Mariner 1152 1263 -39 300 253 46 23 chr2 239472803 239472890 -13783693 + L1MC4 LINE L1 6613 6701 -1341 231 61 0 0 chr2 239472891 239472924 -13783659 + (TA)n Simple_repeat Simple_repeat 1 33 0 2115 145 20 2 chr2 239472982 239473472 -13783111 - L1MA8 LINE L1 -646 5645 5148 239 185 169 15 chr2 239473473 239473538 -13783045 - MER5A DNA MER1_type -113 76 2 842 153 6 25 chr2 239473547 239473704 -13782879 + MER3 DNA MER1_type 1 154 -55 2192 130 13 0 chr2 239473704 239474012 -13782571 + AluSx SINE Alu 1 312 0 261 57 0 0 chr2 239474012 239474047 -13782536 + (GGAA)n Simple_repeat Simple_repeat 1 35 0 280 222 0 16 chr2 239474048 239474111 -13782472 + MER3 DNA MER1_type 148 209 0 2693 45 0 0 chr2 239474887 239475198 -13781385 + AluY SINE Alu 1 311 0 949 241 34 10 chr2 239475349 239475640 -13780943 + L1M4 LINE L1 4477 4774 -1372 526 251 35 55 chr2 239476086 239476285 -13780298 + MIR SINE MIR 58 252 -10 1659 164 40 16 chr2 239476652 239476956 -13779627 - AluJb SINE Alu -1 311 1 281 329 36 50 chr2 239479694 239479834 -13776749 - L2 LINE L2 -1 3271 3134 292 289 12 0 chr2 239479860 239479943 -13776640 + MIR SINE MIR 153 236 -26 1848 212 54 82 chr2 239480435 239481005 -13775578 + MLT2B3 LTR ERVL 1 554 0 906 174 42 85 chr2 239483942 239484178 -13772405 - MLT1B LTR MaLR -2 388 163 21 0 0 0 chr2 239484301 239484322 -13772261 + AT_rich Low_complexity Low_complexity 1 21 0 3475 170 39 56 chr2 239484322 239484458 -13772125 - L1MA10 LINE L1 -29 6305 6168 198 0 0 0 chr2 239484458 239484480 -13772103 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 3475 170 39 56 chr2 239484480 239484497 -13772086 - L1MA10 LINE L1 -166 6168 6152 1702 111 0 0 chr2 239484497 239484722 -13771861 + AluSq SINE Alu 23 247 -66 3475 170 39 56 chr2 239484722 239485390 -13771193 - L1MA10 LINE L1 -182 6152 5497 * 7828 190 24 17 chr2 239485383 239487186 -13769397 + L1 LINE L1 3462 5277 -869 699 218 40 0 chr2 239487187 239487361 -13769222 - MLT1B LTR MaLR -209 181 1 1659 229 68 16 chr2 239487460 239487901 -13768682 - MLT1C LTR MaLR 0 467 4 231 170 0 0 chr2 239488026 239488073 -13768510 + A-rich Low_complexity Low_complexity 1 47 0 2575 54 0 10 chr2 239488435 239488749 -13767834 - AluY SINE Alu 0 311 1 2337 70 6 32 chr2 239489095 239489411 -13767172 + AluY SINE Alu 1 308 -3 2026 114 69 0 chr2 239489772 239490062 -13766521 - AluSx SINE Alu -2 310 1 599 26 13 0 chr2 239490544 239490621 -13765962 + (TG)n Simple_repeat Simple_repeat 1 78 0 204 40 0 0 chr2 239490626 239490651 -13765932 + (TTG)n Simple_repeat Simple_repeat 3 27 0 186 43 0 0 chr2 239491516 239491539 -13765044 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 1996 112 95 0 chr2 239491541 239491826 -13764757 - AluSx SINE Alu 0 312 1 231 311 111 30 chr2 239492151 239492286 -13764297 + L2 LINE L2 3126 3271 -1 1586 140 0 8 chr2 239492734 239492977 -13763606 - AluSg/x SINE Alu 0 312 72 264 328 77 42 chr2 239493021 239493527 -13763056 + L2 LINE L2 1712 2235 -1079 1503 310 65 26 chr2 239494103 239494719 -13761864 - L3 LINE CR1 -740 837 198 566 163 0 92 chr2 239496211 239496352 -13760231 + MLT2C1 LTR ERVL 270 397 0 1675 180 10 20 chr2 239496962 239497256 -13759327 - AluJo SINE Alu -21 291 1 188 221 88 53 chr2 239497732 239497845 -13758738 - L2 LINE L2 -4 3309 3193 2216 105 26 0 chr2 239498174 239498478 -13758105 - AluSx SINE Alu 0 312 1 36 53 0 0 chr2 239498513 239498570 -13758013 + AT_rich Low_complexity Low_complexity 1 57 0 1985 128 10 26 chr2 239499081 239499385 -13757198 - AluSx SINE Alu -13 299 1 511 271 130 21 chr2 239500098 239500290 -13756293 + MIR SINE MIR 50 262 0 1874 154 7 14 chr2 239501408 239501694 -13754889 + AluSx SINE Alu 1 284 -28 498 350 68 42 chr2 239501699 239502108 -13754475 + L2 LINE L2 2221 2640 -674 2358 66 0 13 chr2 239502122 239502425 -13754158 - AluY SINE Alu -12 299 1 184 289 87 39 chr2 239502689 239502793 -13753790 + L2 LINE L2 2934 3042 -271 3276 124 14 6 chr2 239502843 239503335 -13753248 + L1PA13 LINE L1 5657 6152 -11 27 49 0 0 chr2 239503335 239503376 -13753207 + AT_rich Low_complexity Low_complexity 1 41 0 473 228 24 31 chr2 239503613 239503740 -13752843 + L1ME1 LINE L1 59 184 -6212 3345 152 21 4 chr2 239503777 239504297 -13752286 + L1PA16 LINE L1 5634 6162 -4 980 88 0 0 chr2 239504309 239504445 -13752138 + L1P4 LINE L1 5657 5792 -369 21 36 0 0 chr2 239504446 239504474 -13752109 + AT_rich Low_complexity Low_complexity 1 28 0 2658 265 119 31 chr2 239504590 239504899 -13751684 + L1ME1 LINE L1 352 632 -5583 2133 110 0 50 chr2 239504899 239505218 -13751365 + AluSg SINE Alu 1 303 -7 2658 265 119 31 chr2 239505218 239506706 -13749877 + L1ME1 LINE L1 632 2326 -3889 2180 120 3 0 chr2 239506706 239507005 -13749578 + AluSq SINE Alu 1 300 -13 2658 265 119 31 chr2 239507005 239507061 -13749522 + L1ME1 LINE L1 2326 2376 -3839 2099 152 14 25 chr2 239507061 239507422 -13749161 + MLT1A1 LTR MaLR 9 365 0 1037 225 95 102 chr2 239507423 239508024 -13748559 + L1ME1 LINE L1 2379 2975 -3240 * 4849 242 88 22 chr2 239508014 239510565 -13746018 + L1ME1 LINE L1 3506 6231 -4 2242 123 7 0 chr2 239510926 239511236 -13745347 - AluSx SINE Alu 0 312 1 23 33 0 0 chr2 239511510 239511540 -13745043 + AT_rich Low_complexity Low_complexity 1 30 0 324 299 0 0 chr2 239511737 239511814 -13744769 + L2 LINE L2 3187 3263 -9 199 314 39 49 chr2 239512179 239512281 -13744302 + MIR3 SINE MIR 15 115 -93 251 340 79 92 chr2 239513432 239513628 -13742955 - L2 LINE L2 0 3272 3080 1627 157 28 21 chr2 239513628 239513915 -13742668 + AluJo SINE Alu 17 305 -7 251 340 79 92 chr2 239513915 239514033 -13742550 - L2 LINE L2 -192 3080 2962 312 297 7 3 chr2 239514235 239514396 -13742187 - MIR SINE MIR -23 239 36 2138 120 0 17 chr2 239514539 239514839 -13741744 - AluSx SINE Alu -17 295 1 1773 52 79 4 chr2 239514854 239515083 -13741500 - AluY SINE Alu -65 246 1 1998 132 4 0 chr2 239515792 239516095 -13740488 + AluSx SINE Alu 1 304 0 229 157 0 181 chr2 239517517 239517551 -13739032 - MER5A DNA MER1_type -91 98 85 2154 119 0 3 chr2 239517551 239517892 -13738691 - AluSx SINE Alu 0 340 1 229 157 0 181 chr2 239517892 239517939 -13738644 - MER5A DNA MER1_type -104 85 31 290 100 0 0 chr2 239517955 239517995 -13738588 - MADE1 DNA Mariner -40 40 1 248 255 168 3 chr2 239518781 239518895 -13737688 - MIR3 SINE MIR -39 169 39 632 256 25 12 chr2 239518967 239519127 -13737456 + MER5B DNA MER1_type 1 162 -16 819 174 64 6 chr2 239519127 239519299 -13737284 + MER53 DNA DNA 1 182 -7 1029 210 0 0 chr2 239519906 239520073 -13736510 + FAM SINE Alu 1 167 -8 1950 134 0 3 chr2 239520151 239520434 -13736149 + AluJb SINE Alu 1 282 -30 189 0 0 0 chr2 239520466 239520487 -13736096 + (GA)n Simple_repeat Simple_repeat 2 22 0 214 197 0 145 chr2 239521539 239521615 -13734968 - L2 LINE L2 -4 3268 3204 2303 93 0 29 chr2 239521940 239522252 -13734331 + AluSx SINE Alu 1 303 -9 1257 140 0 0 chr2 239522252 239522467 -13734116 + AluSg/x SINE Alu 132 346 0 394 238 63 32 chr2 239522563 239522689 -13733894 - L2 LINE L2 0 3313 3184 183 80 0 0 chr2 239522689 239522714 -13733869 + (TG)n Simple_repeat Simple_repeat 2 26 0 200 323 0 46 chr2 239525365 239525430 -13731153 + MIR SINE MIR 87 148 -60 3966 134 49 11 chr2 239525607 239526240 -13730343 - MER51D LTR ERV1 0 657 1 259 196 0 0 chr2 239526401 239526447 -13730136 + L2 LINE L2 3268 3313 0 445 358 15 0 chr2 239526512 239526716 -13729867 + MIR SINE MIR 56 262 0 2183 119 0 13 chr2 239526760 239527062 -13729521 + AluSx SINE Alu 1 298 -14 192 265 0 73 chr2 239527192 239527260 -13729323 + L2 LINE L2 3251 3313 0 254 130 0 19 chr2 239527261 239527315 -13729268 + (TGAA)n Simple_repeat Simple_repeat 2 54 0 1350 160 33 5 chr2 239527365 239527578 -13729005 + MER20 DNA MER1_type 1 219 0 1295 241 126 71 chr2 239528445 239528963 -13727620 - L1ME2 LINE L1 -19 6145 5600 293 211 67 29 chr2 239529033 239529137 -13727446 + L2 LINE L2 2950 3057 -215 696 200 38 27 chr2 239529247 239529432 -13727151 + L1MC3 LINE L1 6911 7097 -688 371 238 0 40 chr2 239529432 239529533 -13727050 + MLT1F1 LTR MaLR 35 131 -436 372 264 54 8 chr2 239530006 239530135 -13726448 - Charlie8 DNA MER1_type -1934 483 349 264 250 0 0 chr2 239530260 239530316 -13726267 - Charlie8 DNA MER1_type -2186 231 176 1033 127 155 0 chr2 239530334 239530515 -13726068 - MER61E LTR ERV1 -22 547 339 344 198 12 47 chr2 239530519 239530605 -13725978 - MER61E LTR ERV1 -388 181 99 * 655 170 111 0 chr2 239530593 239530728 -13725855 - LTR25 LTR ERV1 -412 382 233 319 175 35 132 chr2 239530701 239530815 -13725768 - MER61E LTR ERV1 -465 104 2 * 241 240 99 41 chr2 239530837 239530871 -13725712 - Charlie8 DNA MER1_type -177 153 122 242 73 24 0 chr2 239530871 239530912 -13725671 + (TG)n Simple_repeat Simple_repeat 1 42 0 241 240 99 41 chr2 239530912 239530998 -13725585 - Charlie8 DNA MER1_type -208 122 26 1584 161 80 7 chr2 239531057 239531331 -13725252 + AluSx SINE Alu 1 294 -18 313 309 14 43 chr2 239531342 239531481 -13725102 - MIR3 SINE MIR -70 138 4 232 326 11 21 chr2 239531690 239531785 -13724798 + MLT1K LTR MaLR 157 250 -338 552 281 88 40 chr2 239531868 239532117 -13724466 - L2 LINE L2 0 3313 3053 438 252 127 57 chr2 239532117 239532370 -13724213 + MLT1K LTR MaLR 344 585 -3 276 311 68 38 chr2 239532990 239533122 -13723461 - L2 LINE L2 -4 3268 3133 1411 181 28 38 chr2 239533214 239533480 -13723103 - MER58D DNA MER1_type -2034 386 122 1376 179 25 130 chr2 239533480 239533888 -13722695 + MLT1A1 LTR MaLR 1 365 0 1411 181 28 38 chr2 239533888 239533941 -13722642 - MER58D DNA MER1_type -2298 122 70 2847 155 139 155 chr2 239533941 239534336 -13722247 + L1MC3 LINE L1 6741 7141 -644 350 248 0 40 chr2 239534336 239534437 -13722146 + MLT1F1 LTR MaLR 35 131 -436 2847 155 139 155 chr2 239534437 239534982 -13721601 + L1MC3 LINE L1 7141 7765 -20 3394 29 11 0 chr2 239534982 239535360 -13721223 + L1PA4 LINE L1 5771 6152 -3 383 259 0 12 chr2 239535437 239535518 -13721065 - MER58D DNA MER1_type -306 80 1 368 341 52 0 chr2 239536859 239536994 -13719589 - MIR SINE MIR -72 190 49 2376 68 0 7 chr2 239541224 239541517 -13715066 - AluY SINE Alu -9 302 12 196 219 0 47 chr2 239541766 239541830 -13714753 + MIR SINE MIR 46 106 -156 824 199 76 0 chr2 239542215 239542386 -13714197 + MER58A DNA MER1_type 2 185 -39 26 30 0 0 chr2 239542539 239542572 -13714011 + AT_rich Low_complexity Low_complexity 1 33 0 417 260 62 34 chr2 239543030 239543176 -13713407 - MIR SINE MIR -65 197 48 413 292 64 45 chr2 239543346 239543548 -13713035 + MIR SINE MIR 55 260 -2 382 73 0 0 chr2 239544812 239544867 -13711716 - Alu SINE Alu 0 302 248 820 118 9 0 chr2 239544867 239544977 -13711606 - AluYb8 SINE Alu -206 112 2 1121 101 0 0 chr2 239545661 239545810 -13710773 - AluSg/x SINE Alu -6 304 156 2068 125 3 0 chr2 239546255 239546552 -13710031 - AluSx SINE Alu -14 298 1 1088 88 0 0 chr2 239546875 239547012 -13709571 + L1PA11 LINE L1 6035 6171 -3 2288 101 7 0 chr2 239548135 239548432 -13708151 + AluSx SINE Alu 1 299 -13 292 290 21 11 chr2 239548639 239548732 -13707851 + L1MC4a LINE L1 5610 5703 -418 1842 185 0 3 chr2 239548896 239549193 -13707390 + AluJb SINE Alu 1 296 -16 248 254 161 8 chr2 239549454 239549572 -13707011 - MIR SINE MIR 0 262 127 286 278 71 24 chr2 239549642 239549768 -13706815 + L1ME4a LINE L1 5986 6117 -4 352 226 78 52 chr2 239549881 239549996 -13706587 + MIR SINE MIR 100 217 -45 203 271 0 0 chr2 239552438 239552486 -13704097 - MIR SINE MIR -109 99 52 279 340 35 14 chr2 239552909 239553053 -13703530 - L2 LINE L2 0 3313 3167 322 321 108 66 chr2 239553229 239553833 -13702750 - L2 LINE L2 -337 2977 2341 5242 141 20 16 chr2 239553833 239554699 -13701884 + L1PA16 LINE L1 5058 5934 -232 1700 171 27 10 chr2 239554699 239554992 -13701591 + AluSx SINE Alu 1 298 -14 5242 141 20 16 chr2 239554992 239555224 -13701359 + L1PA16 LINE L1 5934 6164 -2 322 321 108 66 chr2 239555224 239555274 -13701309 - L2 LINE L2 -973 2341 2295 740 293 54 4 chr2 239555307 239555546 -13701037 - MIR SINE MIR 0 262 12 196 243 0 0 chr2 239556066 239556103 -13700480 - L2 LINE L2 -15 3257 3221 1520 185 84 29 chr2 239556575 239556628 -13699955 + MLT1A1 LTR MaLR 1 50 -315 2091 124 29 48 chr2 239556628 239557006 -13699577 + THE1C LTR MaLR 3 373 -2 1520 185 84 29 chr2 239557006 239557298 -13699285 + MLT1A1 LTR MaLR 50 365 0 358 261 108 36 chr2 239557302 239557551 -13699032 + L1MC4a LINE L1 5680 5946 -1862 25 0 0 0 chr2 239557645 239557670 -13698913 + AT_rich Low_complexity Low_complexity 1 25 0 232 367 106 19 chr2 239557821 239558028 -13698555 + L2 LINE L2 3048 3272 0 2243 192 50 19 chr2 239558653 239559137 -13697446 + MLT1D LTR MaLR 7 505 0 592 280 97 5 chr2 239559137 239559344 -13697239 - L2 LINE L2 -254 3059 2834 234 220 88 77 chr2 239559528 239559619 -13696964 - L3 LINE CR1 -3 1574 1483 215 273 81 50 chr2 239559708 239559807 -13696776 - L3 LINE CR1 -861 716 615 293 348 152 6 chr2 239560078 239560256 -13696327 - MIR SINE MIR -6 256 53 191 290 137 30 chr2 239560516 239560647 -13695936 - MIR3 SINE MIR -63 145 1 2250 114 7 0 chr2 239561461 239561768 -13694815 + AluSc SINE Alu 1 309 0 19211 127 14 88 chr2 239561786 239565873 -13690710 + L1PA7 LINE L1 2 3785 -2361 378 107 0 0 chr2 239565873 239565929 -13690654 + Alu SINE Alu 237 292 -9 11194 91 0 5 chr2 239565929 239568417 -13688166 + L1PA7 LINE L1 3775 6266 0 261 0 0 0 chr2 239568680 239568709 -13687874 + (TG)n Simple_repeat Simple_repeat 2 30 0 495 0 0 0 chr2 239569409 239569464 -13687119 + (TA)n Simple_repeat Simple_repeat 2 56 0 21 0 0 0 chr2 239570604 239570625 -13685958 + AT_rich Low_complexity Low_complexity 1 21 0 2330 103 0 7 chr2 239572349 239572659 -13683924 - AluSx SINE Alu -4 308 1 181 316 18 0 chr2 239572883 239572940 -13683643 - MIR SINE MIR -1 261 204 523 308 110 28 chr2 239573025 239573343 -13683240 + L1MEc LINE L1 55 398 -5998 1037 274 77 48 chr2 239573413 239573973 -13682610 + L1MEc LINE L1 498 1040 -5356 2254 104 7 0 chr2 239573973 239574270 -13682313 + AluSx SINE Alu 12 310 -2 1037 274 77 48 chr2 239574270 239574382 -13682201 + L1MEc LINE L1 1040 1147 -5249 2516 74 0 0 chr2 239574382 239574691 -13681892 + AluY SINE Alu 1 309 -2 1037 274 77 48 chr2 239574691 239574911 -13681672 + L1MEc LINE L1 1147 1417 -4979 2070 141 118 15 chr2 239574911 239575309 -13681274 + LTR47A LTR ERVL 1 439 -13 300 283 69 21 chr2 239575309 239575454 -13681129 + LTR47A-int LTR ERVL 16 167 -5176 302 148 49 62 chr2 239575657 239575738 -13680845 + LTR23-int LTR ERV1 2207 2286 -2594 * 2154 237 66 56 chr2 239575712 239576433 -13680150 + LTR23-int LTR ERV1 1851 2582 -3749 2215 90 7 3 chr2 239576433 239576723 -13679860 + AluSx SINE Alu 1 291 -21 2154 237 66 56 chr2 239576723 239576773 -13679810 + LTR23-int LTR ERV1 2582 2630 -3701 278 77 0 169 chr2 239576820 239576885 -13679698 + LTR23-int LTR ERV1 1200 1253 -3870 * 954 186 69 56 chr2 239576879 239577185 -13679398 + LTR23-int LTR ERV1 2556 2865 -3893 3292 123 12 16 chr2 239577222 239577789 -13678794 + LTR23-int LTR ERV1 3014 3578 -3180 331 98 20 0 chr2 239577790 239577841 -13678742 + LTR47A LTR ERVL 401 452 0 2253 192 11 22 chr2 239577893 239578356 -13678227 + L1MD1 LINE L1 2 459 -6081 5186 221 65 61 chr2 239578369 239580644 -13675939 + L1MD1 LINE L1 3055 5338 -1202 4829 186 49 46 chr2 239580668 239581816 -13674767 + L1MC3 LINE L1 6169 7319 -466 3414 166 28 7 chr2 239581815 239582507 -13674076 + L1MD1 LINE L1 5708 6413 -223 * 741 169 0 0 chr2 239582510 239582646 -13673937 + L1MD1 LINE L1 6486 6621 -15 1553 216 77 21 chr2 239582666 239583245 -13673338 + L1MC/D LINE L1 4824 5443 -743 418 341 150 39 chr2 239584670 239585021 -13671562 - L2 LINE L2 -459 2855 2428 2088 120 52 27 chr2 239585021 239585387 -13671196 - THE1C LTR MaLR 0 375 1 418 341 150 39 chr2 239585387 239585548 -13671035 - L2 LINE L2 -886 2428 2286 440 302 124 53 chr2 239585910 239586516 -13670067 + L1ME4a LINE L1 5314 5962 -159 552 227 130 26 chr2 239588673 239588827 -13667756 - MIR SINE MIR -70 192 23 28 29 0 0 chr2 239589105 239589140 -13667443 + AT_rich Low_complexity Low_complexity 1 35 0 274 279 0 0 chr2 239589211 239589272 -13667311 + C-rich Low_complexity Low_complexity 1 61 0 2266 103 0 0 chr2 239592091 239592383 -13664200 + AluSx SINE Alu 1 292 -20 27 49 0 0 chr2 239592789 239592830 -13663753 + AT_rich Low_complexity Low_complexity 1 41 0 233 368 9 53 chr2 239593198 239593312 -13663271 - L2 LINE L2 -23 3249 3141 22 0 0 0 chr2 239593832 239593854 -13662729 + AT_rich Low_complexity Low_complexity 1 22 0 2384 100 0 0 chr2 239594127 239594437 -13662146 - AluSg SINE Alu 0 310 1 200 179 32 53 chr2 239594510 239594605 -13661978 + (TA)n Simple_repeat Simple_repeat 1 93 0 1758 137 39 0 chr2 239595117 239595373 -13661210 - AluSq SINE Alu -47 266 1 799 220 128 20 chr2 239595501 239595697 -13660886 + MLT1E LTR MaLR 2 175 -418 2178 119 3 0 chr2 239595697 239595990 -13660593 + AluSp SINE Alu 1 294 -19 799 220 128 20 chr2 239595990 239596318 -13660265 + MLT1E LTR MaLR 175 593 0 703 338 123 24 chr2 239596379 239597168 -13659415 - HAL1b LINE L1 -596 1770 230 266 330 25 0 chr2 239598365 239598483 -13658100 + MIR SINE MIR 142 262 0 2263 96 0 43 chr2 239599441 239599764 -13656819 + AluSq SINE Alu 1 309 -4 27 0 0 0 chr2 239599900 239599927 -13656656 + AT_rich Low_complexity Low_complexity 1 27 0 1107 163 17 82 chr2 239600629 239600862 -13655721 + MER20 DNA MER1_type 2 219 0 1373 176 18 9 chr2 239600870 239601092 -13655491 + MER58A DNA MER1_type 1 224 0 1503 213 13 0 chr2 239601129 239601429 -13655154 - L1 LINE L1 -880 5266 4963 4414 152 12 42 chr2 239601429 239602257 -13654326 + L1MB1 LINE L1 5362 6164 -4 296 219 39 8 chr2 239602257 239602385 -13654198 + (TA)n Simple_repeat Simple_repeat 1 132 0 231 88 0 0 chr2 239602461 239602495 -13654088 + (GA)n Simple_repeat Simple_repeat 2 35 0 21 0 0 0 chr2 239603144 239603165 -13653418 + AT_rich Low_complexity Low_complexity 1 21 0 297 274 195 61 chr2 239603303 239603846 -13652737 - L2 LINE L2 -819 2495 1880 1124 265 90 38 chr2 239603846 239604149 -13652434 + MER20B DNA MER1_type 4 339 -444 2240 114 0 0 chr2 239604149 239604448 -13652135 + AluSx SINE Alu 1 299 -13 1124 265 90 38 chr2 239604448 239604590 -13651993 + MER20B DNA MER1_type 339 472 -311 379 306 64 32 chr2 239604609 239604828 -13651755 + L2 LINE L2 3022 3247 -66 488 278 30 0 chr2 239605041 239605174 -13651409 - MIR SINE MIR -50 212 76 1751 178 100 14 chr2 239605224 239605583 -13651000 - MLT1B LTR MaLR 0 390 1 876 262 53 0 chr2 239605593 239605799 -13650784 - MER20 DNA MER1_type -2 217 1 2601 66 0 0 chr2 239606976 239607281 -13649302 + AluY SINE Alu 1 305 -6 186 118 0 0 chr2 239607439 239607473 -13649110 + (TG)n Simple_repeat Simple_repeat 1 34 0 185 0 40 0 chr2 239607662 239607687 -13648896 + (CA)n Simple_repeat Simple_repeat 1 26 0 465 186 44 53 chr2 239608173 239608286 -13648297 - L2 LINE L2 0 3313 3202 2481 94 0 0 chr2 239608611 239608919 -13647664 + AluSg SINE Alu 1 308 -2 344 369 71 22 chr2 239608985 239609253 -13647330 - L2 LINE L2 -592 2722 2442 202 262 0 33 chr2 239609302 239609363 -13647220 - L2 LINE L2 -17 3296 3238 207 263 13 53 chr2 239609505 239609581 -13647002 - L2 LINE L2 -5 3267 3195 182 203 0 16 chr2 239609733 239609797 -13646786 + GA-rich Low_complexity Low_complexity 2 64 0 3480 59 55 5 chr2 239611124 239611504 -13645079 + MLT2A1 LTR ERVL 3 407 -37 180 0 0 0 chr2 239611504 239611524 -13645059 + (TA)n Simple_repeat Simple_repeat 2 21 0 3480 59 55 5 chr2 239611524 239611564 -13645019 + MLT2A1 LTR ERVL 407 444 0 318 216 0 82 chr2 239612211 239612308 -13644275 + MARNA DNA Mariner 138 226 -360 1411 44 0 0 chr2 239612455 239612615 -13643968 + L1PA3 LINE L1 5996 6155 0 23 0 0 0 chr2 239612836 239612859 -13643724 + AT_rich Low_complexity Low_complexity 1 23 0 923 216 28 6 chr2 239613441 239613622 -13642961 + MER5A DNA MER1_type 4 188 -1 2118 129 0 0 chr2 239613735 239614054 -13642529 - AluSg SINE Alu 0 310 1 22 0 0 0 chr2 239614578 239614600 -13641983 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 239615721 239615742 -13640841 + AT_rich Low_complexity Low_complexity 1 21 0 327 85 0 0 chr2 239615742 239615789 -13640794 + (CA)n Simple_repeat Simple_repeat 2 48 0 942 242 127 69 chr2 239615824 239616305 -13640278 + MLT1H LTR MaLR 1 549 0 3219 145 17 0 chr2 239616769 239617245 -13639338 - L1PA15 LINE L1 -5 6160 5677 3212 207 8 0 chr2 239617245 239617962 -13638621 + L1PA15-16 LINE L1 2317 3039 -3810 649 218 16 0 chr2 239619554 239619678 -13636905 + L1PB4 LINE L1 6024 6149 -7 256 339 224 17 chr2 239619766 239619940 -13636643 + MIR SINE MIR 23 232 -30 270 298 207 4 chr2 239620207 239620372 -13636211 - MIR3 SINE MIR -62 200 10 2298 213 79 42 chr2 239622153 239622745 -13633838 - MER90 LTR ERV1 0 614 1 2280 95 3 0 chr2 239623051 239623346 -13633237 + AluY SINE Alu 1 296 -15 1814 101 105 14 chr2 239625423 239625700 -13630883 + AluSq SINE Alu 1 302 -11 2000 193 56 10 chr2 239626245 239626639 -13629944 + MLT2D LTR ERVL 1 412 -2 226 311 0 0 chr2 239628598 239628659 -13627924 + (TATATG)n Simple_repeat Simple_repeat 5 65 0 1645 231 20 15 chr2 239628955 239629357 -13627226 + L1MB8 LINE L1 5766 6169 -9 25 65 0 0 chr2 239629584 239629630 -13626953 + AT_rich Low_complexity Low_complexity 1 46 0 2157 97 7 0 chr2 239630588 239630894 -13625689 - AluSg SINE Alu 0 310 3 279 125 0 0 chr2 239631260 239631300 -13625283 + MLT1B LTR MaLR 1 40 -427 1457 188 52 70 chr2 239631326 239631728 -13624855 + MLT1B LTR MaLR 27 467 0 2197 99 0 0 chr2 239631993 239632302 -13624281 + AluSg SINE Alu 1 309 0 524 299 54 5 chr2 239632306 239632510 -13624073 - MIR SINE MIR -3 259 46 446 288 85 0 chr2 239633262 239633415 -13623168 - Charlie8 DNA MER1_type -2131 286 121 2294 88 3 0 chr2 239633437 239633744 -13622839 - AluSx SINE Alu 0 308 1 386 306 62 31 chr2 239633866 239634059 -13622524 + MIR SINE MIR 49 247 -15 418 369 83 14 chr2 239634080 239634430 -13622153 - L2 LINE L2 -854 2460 2087 249 343 37 28 chr2 239634514 239634622 -13621961 + L2 LINE L2 3137 3245 -27 189 245 0 0 chr2 239634630 239634679 -13621904 + (CAGA)n Simple_repeat Simple_repeat 3 51 0 231 114 0 0 chr2 239634737 239634772 -13621811 + (A)n Simple_repeat Simple_repeat 1 35 0 448 247 18 35 chr2 239634847 239635082 -13621501 + MLT1H LTR MaLR 250 547 -2 24 0 0 0 chr2 239635283 239635307 -13621276 + AT_rich Low_complexity Low_complexity 1 24 0 232 281 214 0 chr2 239636060 239636149 -13620434 + MIR SINE MIR 36 143 -119 1192 205 30 0 chr2 239636574 239636808 -13619775 - MIR SINE MIR -21 241 1 2608 145 54 5 chr2 239636834 239637240 -13619343 - MSTB LTR MaLR 0 426 1 240 330 11 60 chr2 239637371 239637553 -13619030 + MLT1J LTR MaLR 77 249 -262 2057 273 55 53 chr2 239637578 239638672 -13617911 + L1MEc LINE L1 1299 2365 -3850 2344 111 0 0 chr2 239638672 239638978 -13617605 + AluSg SINE Alu 1 306 -4 2057 273 55 53 chr2 239638978 239639273 -13617310 + L1MEc LINE L1 2365 2658 -3557 2254 219 31 35 chr2 239639330 239640015 -13616568 + L1M4 LINE L1 3896 4577 -1569 510 318 55 25 chr2 239640260 239640496 -13616087 - MIR SINE MIR -14 248 6 668 156 174 0 chr2 239640581 239640690 -13615893 + FLAM_A SINE Alu 1 128 -5 2603 62 0 0 chr2 239640692 239640999 -13615584 + AluY SINE Alu 1 307 -4 27 29 0 0 chr2 239641245 239641279 -13615304 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr2 239642411 239642432 -13614151 + AT_rich Low_complexity Low_complexity 1 21 0 687 328 105 35 chr2 239643223 239644060 -13612523 + L2 LINE L2 2419 3313 0 1543 208 3 3 chr2 239644263 239644557 -13612026 - AluJo SINE Alu -18 294 1 198 265 60 24 chr2 239645735 239645818 -13610765 - L2 LINE L2 -356 2916 2831 4639 93 17 0 chr2 239645819 239646413 -13610170 + L1PA10 LINE L1 5565 6168 0 216 154 0 0 chr2 239646425 239646464 -13610119 + MER5A DNA MER1_type 68 106 -83 313 339 59 69 chr2 239646772 239647516 -13609067 + L2 LINE L2 2534 3267 -5 588 297 72 56 chr2 239648589 239648876 -13607707 + L1ME LINE L1 20 320 -5750 3400 166 22 74 chr2 239648876 239649604 -13606979 + LTR8 LTR ERV1 2 691 0 588 297 72 56 chr2 239649604 239649815 -13606768 + L1ME LINE L1 320 526 -5544 266 358 167 25 chr2 239649927 239650089 -13606494 - L2 LINE L2 -1 3271 3087 232 263 75 12 chr2 239650130 239650210 -13606373 + MIR SINE MIR 106 190 -72 785 302 29 4 chr2 239650215 239650457 -13606126 - MIR SINE MIR -13 249 2 2112 101 0 7 chr2 239650477 239650763 -13605820 + AluSx SINE Alu 1 284 -28 260 200 0 0 chr2 239650785 239650830 -13605753 + L2 LINE L2 3210 3254 -18 189 0 0 0 chr2 239651309 239651330 -13605253 + (TAA)n Simple_repeat Simple_repeat 2 22 0 2302 109 0 0 chr2 239651388 239651692 -13604891 + AluSq SINE Alu 5 308 -5 231 311 53 53 chr2 239652371 239652503 -13604080 - MIR3 SINE MIR -8 200 69 268 301 100 5 chr2 239652509 239652732 -13603851 - MIR SINE MIR -1 261 4 208 250 0 0 chr2 239653329 239653385 -13603198 + (TA)n Simple_repeat Simple_repeat 1 56 0 533 231 129 0 chr2 239654186 239654333 -13602250 + MIR SINE MIR 4 169 -93 2100 148 0 0 chr2 239654717 239655020 -13601563 - AluSx SINE Alu -7 305 3 294 329 191 14 chr2 239655387 239655806 -13600777 + L2 LINE L2 2202 2694 -620 672 269 43 16 chr2 239655873 239656092 -13600491 - MIR SINE MIR -3 259 35 298 304 13 0 chr2 239656364 239656443 -13600140 + L2 LINE L2 3174 3253 -19 21 0 0 0 chr2 239658624 239658645 -13597938 + AT_rich Low_complexity Low_complexity 1 21 0 25 51 0 0 chr2 239659503 239659542 -13597041 + AT_rich Low_complexity Low_complexity 1 39 0 419 226 67 108 chr2 239659557 239659612 -13596971 - MIR SINE MIR -67 195 139 3084 63 5 8 chr2 239659612 239659995 -13596588 - L1PA11 LINE L1 -1 6173 5792 419 226 67 108 chr2 239659995 239660134 -13596449 - MIR SINE MIR -123 139 9 2111 153 0 0 chr2 239660247 239660555 -13596028 + AluSx SINE Alu 1 308 -4 461 254 89 42 chr2 239660952 239661188 -13595395 - L1MC5 LINE L1 -30 7931 7685 27 62 0 0 chr2 239661226 239661274 -13595309 + AT_rich Low_complexity Low_complexity 1 48 0 780 294 48 32 chr2 239663051 239663422 -13593161 + L2 LINE L2 2580 2956 -358 285 246 134 67 chr2 239664808 239664942 -13591641 + L2 LINE L2 3171 3313 0 207 299 75 28 chr2 239665249 239665356 -13591227 + L2 LINE L2 2257 2368 -946 955 219 48 5 chr2 239665401 239665611 -13590972 + MER20 DNA MER1_type 1 219 0 23 68 0 0 chr2 239666255 239666299 -13590284 + AT_rich Low_complexity Low_complexity 1 44 0 193 344 43 11 chr2 239667432 239667525 -13589058 + L2 LINE L2 3172 3267 -5 961 171 26 57 chr2 239667601 239667794 -13588789 + MER5A DNA MER1_type 1 187 -2 21 36 0 0 chr2 239668428 239668456 -13588127 + AT_rich Low_complexity Low_complexity 1 28 0 214 295 0 0 chr2 239669106 239669167 -13587416 + (TG)n Simple_repeat Simple_repeat 1 61 0 263 259 29 0 chr2 239669187 239669326 -13587257 + (TG)n Simple_repeat Simple_repeat 2 144 0 239 256 147 15 chr2 239669345 239669461 -13587122 - MIR SINE MIR -65 143 14 726 292 16 35 chr2 239669701 239669961 -13586622 - MIR SINE MIR -3 259 10 272 91 23 0 chr2 239670344 239670388 -13586195 + (GGA)n Simple_repeat Simple_repeat 2 46 0 209 210 16 0 chr2 239670824 239670886 -13585697 + GA-rich Low_complexity Low_complexity 1 63 0 2282 176 53 23 chr2 239671104 239671576 -13585007 + L1MB7 LINE L1 5699 6184 0 777 270 151 34 chr2 239671582 239672027 -13584556 + L2 LINE L2 2447 2943 -371 256 208 19 0 chr2 239672029 239672082 -13584501 - MLT1A1 LTR MaLR 0 457 404 * 1412 177 57 0 chr2 239672066 239672331 -13584252 - MLT1A1 LTR MaLR -85 280 1 415 313 52 5 chr2 239672349 239672541 -13584042 + L2 LINE L2 2946 3146 -167 682 197 22 7 chr2 239672619 239672756 -13583827 - MLT1-int LTR MaLR -641 730 592 401 136 0 12 chr2 239672767 239672848 -13583735 + (CA)n Simple_repeat Simple_repeat 2 81 0 557 277 29 7 chr2 239672872 239673009 -13583574 + L2 LINE L2 3172 3311 -2 274 305 71 50 chr2 239673021 239673162 -13583421 - MIR3 SINE MIR -60 148 5 1652 197 0 10 chr2 239673478 239673787 -13582796 - AluJo SINE Alu -6 306 1 228 287 30 69 chr2 239674245 239674346 -13582237 - L2 LINE L2 -9 3263 3167 329 242 0 0 chr2 239674481 239674547 -13582036 - L2 LINE L2 0 3272 3207 295 255 68 119 chr2 239674502 239674737 -13581846 - MIR SINE MIR -15 247 25 * 200 293 30 61 chr2 239674752 239674851 -13581732 + MIR SINE MIR 19 114 -148 2260 219 7 15 chr2 239674948 239675410 -13581173 - MLT1-int LTR MaLR 0 1735 1278 226 307 0 0 chr2 239675525 239675600 -13580983 - MLT1-int LTR MaLR -983 752 678 1889 204 20 24 chr2 239675657 239676099 -13580484 - MLT1-int LTR MaLR -484 887 355 2345 184 42 42 chr2 239676099 239676594 -13579989 - MLT2B1 LTR ERVL -25 495 1 15511 173 30 25 chr2 239677223 239679980 -13576603 + L1MA8 LINE L1 3508 6250 -1460 2208 122 3 0 chr2 239679980 239680283 -13576300 + AluSx SINE Alu 1 304 -8 15511 173 30 25 chr2 239680283 239680740 -13575843 + L1MA8 LINE L1 6250 6703 -1007 2295 110 3 0 chr2 239680740 239681049 -13575534 - AluY SINE Alu -1 310 1 15511 173 30 25 chr2 239681049 239681520 -13575063 + L1MA8 LINE L1 6703 7226 -484 1780 110 20 16 chr2 239681520 239681775 -13574808 - L1PB1 LINE L1 -1 6150 5895 15511 173 30 25 chr2 239681775 239682149 -13574434 + L1MA8 LINE L1 7226 7597 -113 24 32 0 0 chr2 239682606 239682637 -13573946 + AT_rich Low_complexity Low_complexity 1 31 0 9685 169 29 30 chr2 239682696 239684506 -13572077 + MER21-int LTR ERV1 2333 4140 -51 1786 185 3 6 chr2 239684547 239684860 -13571723 - AluJb SINE Alu 0 312 1 263 128 0 0 chr2 239684982 239685021 -13571562 + MER21A LTR ERV1 516 554 -377 2292 99 0 0 chr2 239685021 239685336 -13571247 - AluSx SINE Alu 0 315 1 21 0 0 0 chr2 239685448 239685469 -13571114 + AT_rich Low_complexity Low_complexity 1 21 0 399 294 147 0 chr2 239685851 239685994 -13570589 + MLT1J2 LTR MaLR 263 426 -24 378 0 0 0 chr2 239685994 239686036 -13570547 + (TG)n Simple_repeat Simple_repeat 2 43 0 2173 139 50 8 chr2 239686911 239687271 -13569312 - THE1C LTR MaLR 0 375 1 2715 42 3 0 chr2 239687338 239687650 -13568933 - L1PA5 LINE L1 -2 6152 5840 1995 154 3 0 chr2 239687688 239687993 -13568590 - MER7A DNA MER2_type 0 346 43 562 171 51 26 chr2 239687994 239688111 -13568472 - MER7A DNA MER2_type -227 119 2 685 295 82 18 chr2 239688524 239689190 -13567393 + L1ME LINE L1 4950 5703 -459 31 82 0 0 chr2 239689335 239689408 -13567175 + AT_rich Low_complexity Low_complexity 1 73 0 2469 50 0 0 chr2 239689416 239689742 -13566841 + AluY SINE Alu 1 326 0 341 283 60 140 chr2 239690216 239690348 -13566235 - L2 LINE L2 0 3272 3131 2156 135 0 3 chr2 239690348 239690660 -13565923 + AluSq SINE Alu 1 311 -2 341 283 60 140 chr2 239690660 239691014 -13565569 - L2 LINE L2 -141 3131 2825 383 318 154 23 chr2 239691223 239691651 -13564932 - L2 LINE L2 -649 2665 2182 2943 111 7 21 chr2 239692812 239692917 -13563666 + L1PB1 LINE L1 5725 5830 -321 2134 125 7 0 chr2 239692917 239693213 -13563370 + AluSx SINE Alu 1 298 -14 2943 111 7 21 chr2 239693213 239693539 -13563044 + L1PB1 LINE L1 5830 6150 -1 302 326 40 34 chr2 239695273 239695448 -13561135 - L1M4 LINE L1 -2201 3945 3770 24 0 0 0 chr2 239695827 239695851 -13560732 + AT_rich Low_complexity Low_complexity 1 24 0 2263 92 10 7 chr2 239696452 239696758 -13559825 - AluSx SINE Alu -5 307 1 934 163 0 0 chr2 239697478 239697631 -13558952 + FRAM SINE Alu 24 176 0 2593 51 0 16 chr2 239697642 239697953 -13558630 + AluSc SINE Alu 1 306 -3 975 301 81 43 chr2 239698005 239698486 -13558097 - L2 LINE L2 0 3313 2807 1091 217 28 5 chr2 239698486 239698698 -13557885 + MER20 DNA MER1_type 3 219 0 975 301 81 43 chr2 239698698 239698735 -13557848 - L2 LINE L2 -506 2807 2773 353 286 57 100 chr2 239699092 239699393 -13557190 - L2 LINE L2 -1 3312 3025 194 333 44 26 chr2 239700346 239700460 -13556123 - MIR SINE MIR -119 143 28 530 251 100 0 chr2 239703642 239703817 -13552766 - MIR SINE MIR -21 241 44 1875 162 36 41 chr2 239704098 239704487 -13552096 - MLT1B LTR MaLR 0 390 4 829 269 40 0 chr2 239704760 239704987 -13551596 - MIR SINE MIR -10 252 17 2009 125 0 7 chr2 239706419 239706706 -13549877 - AluSq SINE Alu -3 310 26 2179 144 24 12 chr2 239707271 239707604 -13548979 - MER1B DNA MER1_type 0 337 1 185 313 16 0 chr2 239709269 239709333 -13547250 - MIR SINE MIR -81 181 117 1496 201 28 14 chr2 239710542 239710831 -13545752 + AluJb SINE Alu 1 293 -19 4267 156 32 7 chr2 239712236 239712995 -13543588 + L1MB5 LINE L1 5397 6174 0 228 280 167 18 chr2 239713214 239713382 -13543201 + L2 LINE L2 1699 1891 -1423 4377 155 34 200 chr2 239714040 239715645 -13540938 + Charlie1a DNA MER1_type 1 1296 -1465 2220 117 0 7 chr2 239715645 239715952 -13540631 - AluSx SINE Alu -7 305 1 4377 155 34 200 chr2 239715952 239716088 -13540495 + Charlie1a DNA MER1_type 1296 1453 -2 2292 102 0 0 chr2 239716465 239716760 -13539823 - AluSx SINE Alu -17 295 1 290 230 325 0 chr2 239717882 239718008 -13538575 + MER5A DNA MER1_type 17 183 -6 399 340 35 40 chr2 239718201 239718401 -13538182 + MIR3 SINE MIR 3 201 -7 28 35 0 35 chr2 239718548 239718578 -13538005 + AT_rich Low_complexity Low_complexity 1 30 -25 1021 26 0 0 chr2 239718578 239718691 -13537892 - L1PA3 LINE L1 -5 6150 6038 28 35 0 35 chr2 239718691 239718717 -13537866 + AT_rich Low_complexity Low_complexity 30 55 0 1162 131 0 0 chr2 239719192 239719352 -13537231 - AluSp SINE Alu -24 289 130 479 138 81 0 chr2 239719368 239719455 -13537128 + L1MA8 LINE L1 6052 6145 -146 344 173 67 0 chr2 239719448 239719523 -13537060 - L1MA8 LINE L1 -64 6227 6148 * 1112 61 0 0 chr2 239719523 239719655 -13536928 - AluSp SINE Alu -181 132 1 261 327 48 10 chr2 239720481 239720585 -13535998 - L2 LINE L2 -13 3259 3152 289 222 78 22 chr2 239720749 239720839 -13535744 + L2 LINE L2 3173 3267 -5 725 168 8 0 chr2 239722155 239722280 -13534303 + MLT2D LTR ERVL 1 126 -288 1040 74 0 7 chr2 239722282 239722417 -13534166 - MER85 DNA T2_type -5 134 1 * 1106 200 34 29 chr2 239722417 239722687 -13533896 + MLT2D LTR ERVL 126 485 -35 328 136 50 7 chr2 239722690 239722830 -13533753 + (TA)n Simple_repeat Simple_repeat 1 146 0 180 208 28 42 chr2 239723298 239723370 -13533213 - L2 LINE L2 -1617 1697 1627 278 241 0 0 chr2 239723414 239723468 -13533115 + L3 LINE CR1 1489 1542 -35 180 0 0 0 chr2 239723592 239723612 -13532971 + (A)n Simple_repeat Simple_repeat 1 20 0 431 36 36 0 chr2 239723929 239723985 -13532598 + L1PA6 LINE L1 6097 6154 0 23 54 0 0 chr2 239724869 239724906 -13531677 + AT_rich Low_complexity Low_complexity 1 37 0 35 24 0 0 chr2 239725305 239725347 -13531236 + AT_rich Low_complexity Low_complexity 1 42 0 2329 96 0 3 chr2 239725347 239725650 -13530933 - AluSq SINE Alu -11 302 1 220 356 29 10 chr2 239726000 239726104 -13530479 + L3 LINE CR1 1394 1499 -78 2234 101 3 0 chr2 239726109 239726396 -13530187 + AluSx SINE Alu 1 288 -24 240 316 33 33 chr2 239727000 239727152 -13529431 + L2 LINE L2 2144 2295 -1019 2057 135 0 0 chr2 239727270 239727566 -13529017 + AluSx SINE Alu 1 296 -16 507 107 0 0 chr2 239727587 239727662 -13528921 + (CAGA)n Simple_repeat Simple_repeat 2 76 0 225 192 64 39 chr2 239729042 239729120 -13527463 + L1P LINE L1 4955 5034 -1112 3578 72 0 2 chr2 239729123 239729565 -13527018 + L1PA7 LINE L1 5707 6147 -7 346 369 66 0 chr2 239729589 239729833 -13526750 + L1M4 LINE L1 5023 5282 -864 24 32 0 0 chr2 239730028 239730059 -13526524 + AT_rich Low_complexity Low_complexity 1 31 0 1887 152 24 0 chr2 239730126 239730415 -13526168 - AluSx SINE Alu -16 296 1 2216 98 0 3 chr2 239730446 239730731 -13525852 + AluSg SINE Alu 1 284 -26 2085 136 0 0 chr2 239730814 239731109 -13525474 - AluSx SINE Alu -17 295 1 2089 103 3 3 chr2 239731311 239731622 -13524961 + AluSc SINE Alu 1 311 0 187 274 0 98 chr2 239731893 239731944 -13524639 - L2 LINE L2 -189 3083 3038 2178 117 0 0 chr2 239732168 239732459 -13524124 + AluSq SINE Alu 1 291 -22 2164 93 4 0 chr2 239732472 239732787 -13523796 + AluSg SINE Alu 5 320 0 2667 120 5 3 chr2 239733211 239733585 -13522998 + THE1C LTR MaLR 1 375 0 496 226 81 8 chr2 239734850 239734974 -13521609 + MER94 DNA DNA 1 133 -1 1562 164 48 15 chr2 239735092 239735226 -13521357 + AluJb SINE Alu 1 129 -183 2001 156 10 0 chr2 239735226 239735533 -13521050 + AluSx SINE Alu 1 310 -2 1562 164 48 15 chr2 239735533 239735666 -13520917 + AluJb SINE Alu 129 277 -35 953 98 7 0 chr2 239735666 239735809 -13520774 + (GAGAA)n Simple_repeat Simple_repeat 1 144 0 257 273 78 0 chr2 239736532 239736609 -13519974 + MARNA DNA Mariner 462 544 -42 356 285 53 68 chr2 239737113 239737300 -13519283 + MER5B DNA MER1_type 2 178 0 207 204 0 0 chr2 239738443 239738492 -13518091 + GA-rich Low_complexity Low_complexity 2 50 0 4614 93 2 3 chr2 239738617 239739217 -13517366 + L1PA13 LINE L1 5565 6163 0 184 222 86 49 chr2 239739574 239739655 -13516928 - L2 LINE L2 -277 3036 2953 334 336 25 0 chr2 239739674 239739796 -13516787 - L2 LINE L2 -470 2844 2720 524 313 183 9 chr2 239739830 239740169 -13516414 - L2 LINE L2 -791 2523 2126 263 304 36 9 chr2 239742583 239742695 -13513888 + MLT1J LTR MaLR 1 115 -396 387 307 200 13 chr2 239742761 239742986 -13513597 + MLT1J LTR MaLR 245 511 0 485 324 98 5 chr2 239743469 239743673 -13512910 + MIR SINE MIR 27 249 -13 691 149 28 0 chr2 239743673 239743965 -13512618 + (CAT)n Simple_repeat Simple_repeat 1 300 0 702 120 16 33 chr2 239743981 239744164 -13512419 + (CAT)n Simple_repeat Simple_repeat 1 180 0 762 133 22 22 chr2 239744201 239744381 -13512202 + (CAT)n Simple_repeat Simple_repeat 1 180 0 702 147 28 11 chr2 239744395 239744572 -13512011 + (CAT)n Simple_repeat Simple_repeat 1 180 0 774 149 22 22 chr2 239744589 239745139 -13511444 + (CAT)n Simple_repeat Simple_repeat 1 550 0 834 111 22 22 chr2 239745150 239745330 -13511253 + (CAT)n Simple_repeat Simple_repeat 1 180 0 795 103 5 46 chr2 239745341 239745564 -13511019 + (CAT)n Simple_repeat Simple_repeat 1 213 0 1629 191 50 9 chr2 239745605 239745946 -13510637 - MLT1A1 LTR MaLR 0 396 11 672 258 154 31 chr2 239747726 239748206 -13508377 + L2 LINE L2 2740 3304 -9 788 173 0 43 chr2 239749027 239749166 -13507417 - FLAM_A SINE Alu 0 133 1 833 165 0 0 chr2 239749551 239749678 -13506905 - FLAM_C SINE Alu -16 127 1 443 294 0 33 chr2 239749768 239749952 -13506631 + (TATG)n Simple_repeat Simple_repeat 1 178 0 1257 187 58 100 chr2 239749972 239750057 -13506526 + MER2 DNA MER2_type 1 88 -256 2066 130 3 7 chr2 239750057 239750358 -13506225 + AluSx SINE Alu 1 300 -12 1257 187 58 100 chr2 239750358 239750631 -13505952 + MER2 DNA MER2_type 88 344 0 706 264 172 36 chr2 239750999 239751167 -13505416 - L2 LINE L2 -4 3309 3165 2118 115 31 0 chr2 239751167 239751455 -13505128 + AluSq SINE Alu 1 297 -16 706 264 172 36 chr2 239751455 239752103 -13504480 - L2 LINE L2 -148 3165 2396 202 114 0 29 chr2 239753404 239753439 -13503144 + (GGAAA)n Simple_repeat Simple_repeat 3 36 0 200 355 0 0 chr2 239753786 239753848 -13502735 + L2 LINE L2 3242 3303 -10 577 288 62 65 chr2 239754905 239755474 -13501109 + L1ME4a LINE L1 5495 6061 -60 217 225 0 0 chr2 239755586 239755626 -13500957 + polypyrimidine Low_complexity Low_complexity 1 40 0 23 68 0 0 chr2 239755902 239755946 -13500637 + AT_rich Low_complexity Low_complexity 1 44 0 1626 124 120 8 chr2 239758201 239758468 -13498115 + AluSg SINE Alu 1 297 -13 24 0 0 0 chr2 239760232 239760256 -13496327 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr2 239762691 239762717 -13493866 + AT_rich Low_complexity Low_complexity 1 26 0 2202 103 0 0 chr2 239763465 239763755 -13492828 - AluY SINE Alu -21 290 1 2243 180 3 3 chr2 239764012 239764378 -13492205 - MER47A DNA MER2_type 0 366 1 180 218 23 115 chr2 239765026 239765113 -13491470 - MIR SINE MIR -58 204 126 1701 84 4 26 chr2 239765485 239765711 -13490872 + AluSc SINE Alu 21 241 -68 246 128 0 0 chr2 239765711 239765750 -13490833 + (A)n Simple_repeat Simple_repeat 1 39 0 221 231 120 19 chr2 239766062 239766170 -13490413 - MIR SINE MIR -134 128 10 2085 136 3 3 chr2 239766195 239766503 -13490080 + AluSx SINE Alu 1 308 -4 378 0 0 0 chr2 239767325 239767367 -13489216 + (A)n Simple_repeat Simple_repeat 1 42 0 180 0 0 0 chr2 239767413 239767433 -13489150 + (CCCCAA)n Simple_repeat Simple_repeat 4 23 0 219 229 0 33 chr2 239767670 239767731 -13488852 + L2 LINE L2 3214 3272 0 200 169 34 34 chr2 239768753 239768812 -13487771 + A-rich Low_complexity Low_complexity 1 59 0 1859 167 36 22 chr2 239771304 239771596 -13484987 + MLT1A1 LTR MaLR 1 300 -65 2360 161 84 0 chr2 239771596 239771988 -13484595 + MSTB LTR MaLR 1 425 -1 1859 167 36 22 chr2 239771988 239772055 -13484528 + MLT1A1 LTR MaLR 300 365 0 234 0 0 0 chr2 239772633 239772659 -13483924 + (CTG)n Simple_repeat Simple_repeat 3 28 0 487 287 75 27 chr2 239773996 239774431 -13482152 + L2 LINE L2 2762 3311 -2 2210 129 0 0 chr2 239775123 239775433 -13481150 + AluSg SINE Alu 1 310 0 185 313 45 0 chr2 239775699 239775766 -13480817 - L2 LINE L2 -8 3264 3195 324 0 0 0 chr2 239775769 239775805 -13480778 + (A)n Simple_repeat Simple_repeat 1 36 0 266 254 16 74 chr2 239775918 239776040 -13480543 - MIR SINE MIR -21 241 127 1040 265 45 45 chr2 239776067 239776101 -13480482 + L2 LINE L2 2758 2790 -523 2443 88 0 0 chr2 239776101 239776398 -13480185 - AluSq SINE Alu -16 297 1 1040 265 45 45 chr2 239776398 239776701 -13479882 + L2 LINE L2 2790 3091 -222 573 106 0 0 chr2 239776701 239776786 -13479797 - L1PA16 LINE L1 -1 6165 6081 1040 265 45 45 chr2 239776786 239776993 -13479590 + L2 LINE L2 3091 3306 -7 210 71 0 0 chr2 239776993 239777021 -13479562 + (TGAA)n Simple_repeat Simple_repeat 3 30 0 606 256 0 0 chr2 239777764 239777944 -13478639 + (CA)n Simple_repeat Simple_repeat 1 180 0 313 309 89 49 chr2 239779141 239779264 -13477319 - L2 LINE L2 -17 3255 3128 192 264 75 38 chr2 239779623 239779729 -13476854 + MIR3 SINE MIR 94 203 -5 946 203 77 19 chr2 239780209 239780416 -13476167 - MER20 DNA MER1_type 0 219 1 239 311 0 0 chr2 239780711 239780772 -13475811 + GA-rich Low_complexity Low_complexity 2 62 0 376 285 73 13 chr2 239780809 239780960 -13475623 - MER5A DNA MER1_type -23 166 7 855 233 114 10 chr2 239780976 239781178 -13475405 + MER58A DNA MER1_type 2 224 0 333 268 124 7 chr2 239781819 239781972 -13474611 + MIR3 SINE MIR 34 204 -4 1434 288 173 19 chr2 239783047 239784121 -13472462 + L1ME3 LINE L1 3884 5130 -1016 1020 42 0 0 chr2 239784121 239784241 -13472342 + L1PA4 LINE L1 6035 6154 -1 1434 288 173 19 chr2 239784241 239784259 -13472324 + L1ME3 LINE L1 5130 5144 -1002 487 250 219 24 chr2 239784255 239784547 -13472036 + L1ME3 LINE L1 5764 6112 -50 * 230 143 0 0 chr2 239785139 239785181 -13471402 + L2 LINE L2 3267 3308 -5 1326 148 0 19 chr2 239786507 239786717 -13469866 + AluJb SINE Alu 86 291 -21 452 82 16 0 chr2 239787055 239787116 -13469467 + U7 snRNA snRNA 2 63 0 2127 112 0 3 chr2 239787427 239787714 -13468869 + AluSp SINE Alu 1 286 -27 506 299 119 0 chr2 239788092 239788286 -13468297 - MIR SINE MIR -2 260 44 241 246 58 53 chr2 239788288 239788459 -13468124 + L1M4 LINE L1 4584 4755 -1391 2187 121 3 0 chr2 239788561 239788859 -13467724 + AluSx SINE Alu 5 303 -9 846 258 77 5 chr2 239789029 239789238 -13467345 + MER58A DNA MER1_type 1 224 0 25 0 0 0 chr2 239789606 239789631 -13466952 + AT_rich Low_complexity Low_complexity 1 25 0 2371 103 0 0 chr2 239789757 239790059 -13466524 + AluSq SINE Alu 1 302 -11 1694 209 21 15 chr2 239790110 239790449 -13466134 + MER58B DNA MER1_type 1 341 0 2369 207 84 18 chr2 239791647 239792194 -13464389 + MER119 DNA MER1_type 1 583 0 261 281 90 56 chr2 239792477 239792617 -13463966 - MIR SINE MIR -61 147 21 351 298 66 20 chr2 239792872 239793023 -13463560 + MIR SINE MIR 30 187 -75 2578 30 0 10 chr2 239794711 239795007 -13461576 + L1PA4 LINE L1 5861 6153 -2 217 132 0 0 chr2 239795010 239795048 -13461535 + (TAAAAA)n Simple_repeat Simple_repeat 3 40 0 2291 104 3 0 chr2 239795946 239796244 -13460339 + AluSp SINE Alu 1 299 -14 2365 80 0 10 chr2 239796244 239796544 -13460039 + AluY SINE Alu 1 297 -14 199 263 213 44 chr2 239797402 239797562 -13459021 + MIR3 SINE MIR 17 203 -5 1797 150 10 38 chr2 239798488 239798801 -13457782 + AluJb SINE Alu 1 304 -8 1155 184 85 82 chr2 239799680 239799962 -13456621 + AluJo SINE Alu 8 290 -22 294 29 0 0 chr2 239799967 239800002 -13456581 + (CA)n Simple_repeat Simple_repeat 2 36 0 24 0 0 0 chr2 239800595 239800619 -13455964 + AT_rich Low_complexity Low_complexity 1 24 0 2059 190 15 13 chr2 239801496 239801885 -13454698 + MLT1B LTR MaLR 1 390 0 193 330 112 44 chr2 239802029 239802323 -13454260 + L2 LINE L2 2611 2924 -390 2346 53 0 4 chr2 239802620 239802929 -13453654 + AluY SINE Alu 1 308 0 2436 189 57 54 chr2 239803017 239803374 -13453209 + MER92B LTR ERV1 1 362 -274 1912 218 86 5 chr2 239803374 239803806 -13452777 + MLT1C LTR MaLR 1 467 0 2436 189 57 54 chr2 239803806 239804082 -13452501 + MER92B LTR ERV1 362 636 0 240 306 0 0 chr2 239804805 239804867 -13451716 - L3 LINE CR1 -4 1573 1512 21 57 0 0 chr2 239805300 239805335 -13451248 + AT_rich Low_complexity Low_complexity 1 35 0 208 111 37 37 chr2 239805821 239805875 -13450708 + T-rich Low_complexity Low_complexity 5 58 0 249 57 0 0 chr2 239806700 239806735 -13449848 + (TTG)n Simple_repeat Simple_repeat 2 36 0 2419 70 0 0 chr2 239806737 239807035 -13449548 - AluY SINE Alu -13 298 1 236 321 28 18 chr2 239807730 239807839 -13448744 - MIR3 SINE MIR -18 190 81 778 231 125 84 chr2 239808702 239809270 -13447313 + MLT1G1 LTR MaLR 5 595 0 257 296 204 31 chr2 239809879 239810075 -13446508 + MIR SINE MIR 33 262 0 2028 129 0 7 chr2 239811010 239811340 -13445243 + AluSx SINE Alu 1 328 0 4074 103 20 0 chr2 239811464 239812010 -13444573 - L1PA16 LINE L1 -11 6155 5599 30 27 0 0 chr2 239812388 239812425 -13444158 + AT_rich Low_complexity Low_complexity 1 37 0 198 287 10 89 chr2 239812428 239812529 -13444054 + MIR3 SINE MIR 101 193 -15 588 202 0 0 chr2 239812611 239812720 -13443863 + MIR SINE MIR 97 205 -57 337 290 92 52 chr2 239813601 239813893 -13442690 + L1ME LINE L1 5287 5588 -582 22 0 0 0 chr2 239814275 239814297 -13442286 + AT_rich Low_complexity Low_complexity 1 22 0 381 75 0 0 chr2 239815063 239815116 -13441467 + (TTCC)n Simple_repeat Simple_repeat 4 56 0 216 0 0 0 chr2 239816178 239816202 -13440381 + (A)n Simple_repeat Simple_repeat 1 24 0 695 219 15 153 chr2 239816635 239816909 -13439674 - MIR SINE MIR -6 256 21 185 395 110 0 chr2 239817314 239817423 -13439160 - MIR3 SINE MIR -48 160 40 761 251 104 28 chr2 239817500 239817787 -13438796 + MLT1J1 LTR MaLR 21 329 -117 1819 202 59 15 chr2 239818182 239818588 -13437995 - MER63B DNA MER1_type -1 435 12 1211 219 63 58 chr2 239818929 239819327 -13437256 + L1M4 LINE L1 4546 4945 -1201 184 285 120 57 chr2 239819768 239819926 -13436657 + MER5A DNA MER1_type 1 168 -21 2269 106 3 0 chr2 239820067 239820370 -13436213 - AluSx SINE Alu -8 304 1 243 377 50 44 chr2 239821550 239822213 -13434370 - L2 LINE L2 -2047 1267 601 231 356 10 19 chr2 239823585 239823689 -13432894 - L3 LINE CR1 -453 1124 1022 1408 168 57 32 chr2 239823758 239824038 -13432545 + AluJb SINE Alu 1 287 -25 268 173 39 0 chr2 239824084 239824136 -13432447 + MIR SINE MIR 75 128 -134 782 231 41 58 chr2 239824289 239824558 -13432025 + MIR SINE MIR 1 258 -4 1050 49 0 0 chr2 239824966 239825089 -13431494 - L1MA2 LINE L1 0 6304 6182 1940 105 14 25 chr2 239825151 239825437 -13431146 - AluSx SINE Alu -3 309 27 1357 167 70 39 chr2 239825849 239826106 -13430477 - AluJo SINE Alu -30 282 18 352 174 151 0 chr2 239826384 239826470 -13430113 + MER94 DNA DNA 1 99 -35 294 235 108 20 chr2 239826550 239826652 -13429931 - L2 LINE L2 0 3272 3162 609 252 175 13 chr2 239827525 239827703 -13428880 - L2 LINE L2 -19 3294 3146 2233 88 0 3 chr2 239827703 239827986 -13428597 + AluSc SINE Alu 1 282 -27 195 69 0 0 chr2 239827986 239828015 -13428568 + (CATA)n Simple_repeat Simple_repeat 2 30 0 609 252 175 13 chr2 239828015 239828144 -13428439 - L2 LINE L2 -166 3147 2936 689 298 82 47 chr2 239828246 239828759 -13427824 + L1ME4a LINE L1 5521 6051 -70 242 270 81 27 chr2 239829047 239829121 -13427462 + L2 LINE L2 3175 3252 -20 201 171 73 0 chr2 239830032 239830073 -13426510 + CT-rich Low_complexity Low_complexity 3 46 0 853 183 144 0 chr2 239830233 239830413 -13426170 + MER63A DNA MER1_type 1 206 -4 2518 56 7 3 chr2 239830611 239830913 -13425670 + AluY SINE Alu 3 305 -6 306 320 0 10 chr2 239832034 239832134 -13424449 + LTR67 LTR ERVL 459 557 0 219 297 87 65 chr2 239833005 239833190 -13423393 + MIR SINE MIR 20 208 -54 180 0 0 0 chr2 239834781 239834801 -13421782 + (TTA)n Simple_repeat Simple_repeat 3 22 0 2161 64 11 4 chr2 239834801 239835067 -13421516 - L1PA5 LINE L1 -18 6136 5869 1415 25 0 0 chr2 239835068 239835229 -13421354 + L1P2 LINE L1 5595 5755 -400 31 58 0 0 chr2 239836053 239836105 -13420478 + AT_rich Low_complexity Low_complexity 1 52 0 1105 211 75 106 chr2 239836441 239836958 -13419625 + MLT1D LTR MaLR 5 505 0 511 232 68 62 chr2 239837057 239837234 -13419349 + MIR SINE MIR 15 192 -70 3241 166 64 3 chr2 239837657 239837802 -13418781 - L1MA9 LINE L1 0 6312 6177 243 0 0 0 chr2 239837802 239837829 -13418754 + (TG)n Simple_repeat Simple_repeat 1 27 0 3241 166 64 3 chr2 239837829 239838278 -13418305 - L1MA9 LINE L1 -135 6177 5682 215 227 0 0 chr2 239839370 239839414 -13417169 - L2 LINE L2 0 3313 3270 21 0 0 0 chr2 239839688 239839709 -13416874 + AT_rich Low_complexity Low_complexity 1 21 0 2918 82 11 3 chr2 239840952 239841332 -13415251 - L1PA13 LINE L1 -19 6144 5762 210 294 137 10 chr2 239841874 239841976 -13414607 + L2 LINE L2 3185 3299 -14 765 265 150 0 chr2 239843186 239843386 -13413197 - MIR SINE MIR -20 242 13 685 206 0 0 chr2 239844644 239844770 -13411813 - AluSg/x SINE Alu -12 300 175 823 146 0 23 chr2 239845177 239845307 -13411276 + FLAM_C SINE Alu 1 127 -16 268 323 71 18 chr2 239845418 239845547 -13411036 - MIR SINE MIR -35 173 39 345 189 0 0 chr2 239849235 239849325 -13407258 + (TA)n Simple_repeat Simple_repeat 1 90 0 229 65 0 0 chr2 239849346 239849392 -13407191 + LTR66 LTR ERVL 394 439 -171 6445 53 5 0 chr2 239849396 239850172 -13406411 + L1PA7 LINE L1 5352 6131 -23 228 185 0 0 chr2 239850173 239850227 -13406356 + (TA)n Simple_repeat Simple_repeat 1 54 0 2477 84 14 3 chr2 239850231 239850577 -13406006 - L1P LINE L1 -1495 4651 4302 889 197 24 29 chr2 239851513 239851721 -13404862 + MER3 DNA MER1_type 3 209 0 257 217 119 42 chr2 239851756 239851899 -13404684 + L1ME4a LINE L1 5967 6120 -1 705 245 191 44 chr2 239852088 239852471 -13404112 + L2 LINE L2 2871 3309 -4 326 285 50 55 chr2 239852546 239852746 -13403837 + MIR SINE MIR 63 261 -1 543 209 205 47 chr2 239852859 239853192 -13403391 - MLT1G1 LTR MaLR -2 593 205 255 227 0 38 chr2 239853200 239853440 -13403143 + GA-rich Low_complexity Low_complexity 1 230 0 619 252 60 60 chr2 239853500 239853718 -13402865 - MLT1G1 LTR MaLR -362 233 16 1196 257 76 41 chr2 239854599 239855086 -13401497 + LTR33 LTR ERVL 14 517 -4 2173 117 0 17 chr2 239855096 239855395 -13401188 - AluSx SINE Alu -18 294 1 200 254 15 15 chr2 239861672 239861739 -13394844 - L2 LINE L2 -4 3309 3243 630 222 111 26 chr2 239861867 239862056 -13394527 + MER63A DNA MER1_type 5 209 -1 351 0 0 0 chr2 239862644 239862683 -13393900 + (CA)n Simple_repeat Simple_repeat 2 40 0 28 48 0 0 chr2 239862701 239862743 -13393840 + AT_rich Low_complexity Low_complexity 1 42 0 2300 114 0 0 chr2 239863382 239863689 -13392894 + AluSx SINE Alu 1 307 -5 26 30 0 0 chr2 239863841 239863874 -13392709 + AT_rich Low_complexity Low_complexity 1 33 0 324 273 59 64 chr2 239863930 239864117 -13392466 - MIR SINE MIR -1 261 76 211 214 0 0 chr2 239864344 239864386 -13392197 + A-rich Low_complexity Low_complexity 2 43 0 507 148 0 0 chr2 239864422 239864510 -13392073 + (ATG)n Simple_repeat Simple_repeat 2 89 0 232 261 58 0 chr2 239864736 239864805 -13391778 - L2 LINE L2 -14 3258 3186 507 136 0 0 chr2 239864918 239865028 -13391555 + (TG)n Simple_repeat Simple_repeat 2 111 0 225 276 23 35 chr2 239865050 239865137 -13391446 - L2 LINE L2 -218 3054 2969 315 333 16 0 chr2 239865317 239865443 -13391140 + L2 LINE L2 2255 2382 -932 363 333 108 26 chr2 239866516 239866858 -13389725 - L2 LINE L2 -1 3271 2902 634 294 85 29 chr2 239867919 239868077 -13388506 - L1ME4a LINE L1 -287 5834 5686 2327 108 0 7 chr2 239868077 239868382 -13388201 - AluSx SINE Alu -9 303 1 634 294 85 29 chr2 239868382 239868529 -13388054 - L1ME4a LINE L1 -435 5686 5512 3153 88 30 0 chr2 239869533 239869974 -13386609 + L1PA10 LINE L1 5710 6163 -5 401 247 58 46 chr2 239870910 239871084 -13385499 - MER5B DNA MER1_type -1 177 2 327 249 70 84 chr2 239871415 239871628 -13384955 - L2 LINE L2 0 3313 3104 313 327 56 0 chr2 239872063 239872170 -13384413 - L1M4 LINE L1 -3923 2223 2111 278 276 29 53 chr2 239872416 239872586 -13383997 + L1M4 LINE L1 2148 2313 -3833 1312 275 93 17 chr2 239872596 239873014 -13383569 + MLT1K LTR MaLR 139 588 0 34 24 0 0 chr2 239873695 239873736 -13382847 + AT_rich Low_complexity Low_complexity 1 41 0 185 265 126 80 chr2 239873764 239873832 -13382751 + MIR SINE MIR 50 113 -149 2841 85 5 11 chr2 239873832 239874207 -13382376 + THE1C LTR MaLR 1 373 -2 10446 109 43 10 chr2 239874209 239875738 -13380845 + THE1C-int LTR MaLR 1 1580 0 2314 108 93 3 chr2 239875738 239876082 -13380501 + THE1C LTR MaLR 1 375 0 185 265 126 80 chr2 239876082 239876160 -13380423 + MIR SINE MIR 112 207 -55 186 306 102 10 chr2 239876352 239876450 -13380133 + MIR3 SINE MIR 91 197 -11 183 42 0 0 chr2 239876739 239876763 -13379820 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 283 305 38 23 chr2 239877216 239877347 -13379236 + MIR3 SINE MIR 45 177 -31 3250 172 38 2 chr2 239877737 239878314 -13378269 + L1MB5 LINE L1 5569 6166 -8 1726 142 3 72 chr2 239878724 239879056 -13377527 + AluJo SINE Alu 1 309 -3 25 0 0 0 chr2 239879534 239879559 -13377024 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr2 239880096 239880117 -13376466 + AT_rich Low_complexity Low_complexity 1 21 0 1774 180 3 3 chr2 239880182 239880482 -13376101 - AluSx SINE Alu -12 300 1 288 314 28 2 chr2 239880980 239881086 -13375497 + L1ME LINE L1 5508 5614 -507 315 0 0 0 chr2 239881101 239881136 -13375447 + (TG)n Simple_repeat Simple_repeat 2 36 0 1241 135 0 0 chr2 239881154 239881324 -13375259 - AluSg/x SINE Alu -14 298 129 2044 65 101 25 chr2 239881449 239881725 -13374858 + AluY SINE Alu 1 297 -14 663 118 204 7 chr2 239882173 239882325 -13374258 + MER53 DNA DNA 2 183 -6 2028 135 0 4 chr2 239883069 239883350 -13373233 + AluJb SINE Alu 1 280 -32 2557 59 0 0 chr2 239883452 239883756 -13372827 + AluY SINE Alu 1 304 -7 2912 204 99 52 chr2 239883879 239884413 -13372170 + L1ME2 LINE L1 4663 5171 -993 1852 165 6 25 chr2 239884413 239884728 -13371855 + AluJb SINE Alu 1 309 -3 2912 204 99 52 chr2 239884728 239885628 -13370955 + L1ME2 LINE L1 5171 6163 -1 188 298 58 19 chr2 239886405 239886509 -13370074 + MIR SINE MIR 2 109 -153 1107 194 18 60 chr2 239887035 239887085 -13369498 - MER58B DNA MER1_type -2082 338 287 1751 175 0 39 chr2 239887085 239887393 -13369190 + AluSx SINE Alu 1 296 -16 1107 194 18 60 chr2 239887393 239887562 -13369021 - MER58B DNA MER1_type -2133 287 131 834 146 0 15 chr2 239887562 239887692 -13368891 - FLAM_C SINE Alu -5 128 1 1107 194 18 60 chr2 239887692 239887755 -13368828 - MER58B DNA MER1_type -2289 131 67 1977 124 9 67 chr2 239887821 239888151 -13368432 - AluSx SINE Alu -1 311 1 291 238 184 28 chr2 239888712 239888902 -13367681 - MIR3 SINE MIR -31 231 5 607 198 34 62 chr2 239889074 239889251 -13367332 + MER5B DNA MER1_type 7 178 0 210 325 38 4 chr2 239890120 239890248 -13366335 - MIR SINE MIR -65 143 33 255 93 0 0 chr2 239890278 239890321 -13366262 + (TG)n Simple_repeat Simple_repeat 2 44 0 1597 143 20 7 chr2 239990458 239990752 -13265831 + AluSx SINE Alu 6 303 -9 2470 53 0 3 chr2 239990753 239991056 -13265527 + AluY SINE Alu 2 303 -8 2126 120 0 0 chr2 239991056 239991357 -13265226 + AluSx SINE Alu 1 301 -11 1411 200 13 13 chr2 239991428 239991728 -13264855 + AluJo SINE Alu 1 300 -12 2154 82 0 63 chr2 239992339 239992657 -13263926 + AluSx SINE Alu 1 298 -14 1320 139 9 5 chr2 239993914 239994137 -13262446 - AluJb SINE Alu -9 303 80 1204 179 111 79 chr2 239994594 239995036 -13261547 - LTR37B LTR ERV1 -7 461 6 393 318 148 11 chr2 239995688 239995877 -13260706 + MIR SINE MIR 37 251 -11 1987 117 3 17 chr2 239995971 239996271 -13260312 + AluSx SINE Alu 1 296 -16 318 288 172 10 chr2 239996736 239996934 -13259649 - MIR SINE MIR -2 260 31 187 331 92 39 chr2 239997211 239997341 -13259242 + MIR SINE MIR 14 150 -112 750 205 0 24 chr2 239997569 239997748 -13258835 - MER7A DNA MER2_type -174 172 1 1229 234 13 13 chr2 239997750 239998054 -13258529 - AluJb SINE Alu -8 304 1 2067 121 0 13 chr2 239998199 239998504 -13258079 + AluSx SINE Alu 1 301 -11 1805 124 21 14 chr2 239998624 239998914 -13257669 - AluSx SINE Alu -20 292 1 412 331 53 0 chr2 239999589 239999758 -13256825 + MIR SINE MIR 23 200 -62 774 154 0 46 chr2 239999760 239999890 -13256693 + FLAM_A SINE Alu 1 124 -9 643 146 10 0 chr2 239999937 240000033 -13256550 - AluJb SINE Alu -18 294 198 1585 148 16 0 chr2 240000033 240000283 -13256300 + AluJb SINE Alu 58 311 -1 1427 138 52 4 chr2 240000328 240000559 -13256024 - MSTA LTR MaLR 0 428 187 1188 139 5 19 chr2 240000562 240000771 -13255812 - AluJb SINE Alu -1 311 106 1651 156 83 0 chr2 240001080 240001369 -13255214 - AluSq SINE Alu 0 313 1 1192 134 0 5 chr2 240001781 240001967 -13254616 + AluSp SINE Alu 120 304 -9 327 333 72 14 chr2 240002199 240002337 -13254246 - L2 LINE L2 -2 3270 3125 2064 105 16 7 chr2 240002338 240002643 -13253940 + AluSq SINE Alu 1 308 -5 1675 179 0 7 chr2 240003019 240003315 -13253268 + AluJb SINE Alu 1 294 -18 273 274 44 26 chr2 240003463 240003576 -13253007 - MER104 DNA Tc2 0 180 66 2122 117 0 0 chr2 240003645 240003944 -13252639 + AluSx SINE Alu 1 299 -13 1690 149 10 7 chr2 240004117 240004418 -13252165 + AluJb SINE Alu 2 303 -9 1833 168 124 24 chr2 240004799 240005211 -13251372 + MLT1C LTR MaLR 1 453 -14 2263 88 0 0 chr2 240005490 240005797 -13250786 + AluY SINE Alu 1 307 -4 387 267 67 33 chr2 240005990 240006051 -13250532 + MLT1J LTR MaLR 8 65 -446 2070 114 7 0 chr2 240006051 240006348 -13250235 + AluSx SINE Alu 1 299 -13 387 267 67 33 chr2 240006348 240006436 -13250147 + MLT1J LTR MaLR 65 162 -349 218 206 0 48 chr2 240006641 240006704 -13249879 + T-rich Low_complexity Low_complexity 3 62 0 432 306 119 18 chr2 240007436 240007655 -13248928 + MLT1K LTR MaLR 342 582 -6 2137 122 125 16 chr2 240008133 240008517 -13248066 + MSTA LTR MaLR 3 428 0 2568 62 0 3 chr2 240008901 240009206 -13247377 - AluY SINE Alu -7 304 1 194 62 31 0 chr2 240009606 240009638 -13246945 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1797 137 4 4 chr2 240009643 240009920 -13246663 - AluSx SINE Alu -35 277 1 2290 106 3 0 chr2 240010055 240010358 -13246225 + AluSq SINE Alu 1 304 -9 231 270 32 0 chr2 240011097 240011160 -13245423 + L2 LINE L2 3208 3272 0 2360 104 0 3 chr2 240011199 240011508 -13245075 + AluSq SINE Alu 1 308 -5 210 320 188 28 chr2 240011961 240012286 -13244297 - L2 LINE L2 -764 2550 2174 1722 172 34 20 chr2 240012439 240012736 -13243847 - AluJb SINE Alu -8 304 4 2268 97 13 10 chr2 240012767 240013077 -13243506 - AluSx SINE Alu -1 311 1 778 183 179 17 chr2 240014347 240014587 -13241996 + LTR54B LTR ERV1 2 280 -218 2313 106 0 0 chr2 240014587 240014890 -13241693 + AluSq SINE Alu 1 303 -10 2158 103 0 0 chr2 240014898 240015207 -13241376 + AluY SINE Alu 1 309 0 1213 134 0 0 chr2 240015207 240015378 -13241205 + AluSg/x SINE Alu 132 302 -8 655 200 86 19 chr2 240015378 240015588 -13240995 + LTR54B LTR ERV1 273 496 -2 2374 96 0 0 chr2 240015683 240015985 -13240598 - AluSg SINE Alu -8 302 1 2187 74 20 0 chr2 240016185 240016481 -13240102 - AluY SINE Alu -8 303 2 297 0 0 0 chr2 240016560 240016593 -13239990 + (TG)n Simple_repeat Simple_repeat 2 34 0 371 247 73 90 chr2 240016804 240016907 -13239676 - L1ME LINE L1 -456 5665 5562 1081 257 88 51 chr2 240016907 240016999 -13239584 - MLT1J LTR MaLR -3 508 421 2238 97 0 3 chr2 240016999 240017287 -13239296 + AluSg SINE Alu 1 287 -23 207 0 0 0 chr2 240017290 240017313 -13239270 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 1081 257 88 51 chr2 240017313 240017706 -13238877 - MLT1J LTR MaLR -91 420 1 371 247 73 90 chr2 240017706 240017780 -13238803 - L1ME LINE L1 -559 5562 5491 33 56 0 0 chr2 240019753 240019807 -13236776 + AT_rich Low_complexity Low_complexity 1 54 0 334 133 33 17 chr2 240019851 240019911 -13236672 - MER66B LTR ERV1 -139 347 287 726 10 0 68 chr2 240019989 240020092 -13236491 - AluSc SINE Alu 0 309 214 979 19 0 0 chr2 240020092 240020198 -13236385 - AluSc SINE Alu -203 106 1 2215 103 0 7 chr2 240020245 240020547 -13236036 - AluSx SINE Alu -12 300 1 1832 73 8 27 chr2 240020923 240021182 -13235401 - AluY SINE Alu -13 298 45 199 70 23 23 chr2 240021242 240021285 -13235298 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 878 150 0 0 chr2 240022160 240022293 -13234290 + FLAM_C SINE Alu 1 133 0 1982 123 0 4 chr2 240022313 240022581 -13234002 + AluSx SINE Alu 15 281 -31 198 0 0 0 chr2 240022584 240022606 -13233977 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1957 130 49 0 chr2 240022615 240022900 -13233683 + AluSx SINE Alu 1 299 -13 705 169 0 8 chr2 240023006 240023130 -13233453 - AluSg/x SINE Alu -8 304 182 2167 105 7 7 chr2 240025403 240025698 -13230885 - AluSx SINE Alu -17 295 1 421 246 0 29 chr2 240025796 240025934 -13230649 + MIR SINE MIR 48 181 -81 195 278 0 19 chr2 240026770 240026824 -13229759 + L2 LINE L2 3137 3189 -83 873 211 49 20 chr2 240026891 240027095 -13229488 + AluJo SINE Alu 49 258 -54 2603 61 0 3 chr2 240027421 240027733 -13228850 - AluY SINE Alu 0 311 1 1076 123 7 7 chr2 240028269 240028423 -13228160 - AluSg/x SINE Alu -24 286 133 333 212 35 62 chr2 240028525 240028638 -13227945 + MIR SINE MIR 32 141 -121 1746 158 11 7 chr2 240028845 240029123 -13227460 + AluJb SINE Alu 10 288 -24 206 292 77 0 chr2 240029244 240029309 -13227274 + L2 LINE L2 3203 3272 0 2030 116 10 7 chr2 240029568 240029860 -13226723 - AluSq SINE Alu -20 293 1 956 135 0 39 chr2 240030602 240030758 -13225825 - AluSx SINE Alu -6 303 154 631 105 0 0 chr2 240030758 240030844 -13225739 - AluSx SINE Alu -226 87 2 211 259 35 0 chr2 240031347 240031405 -13225178 - L2 LINE L2 0 3313 3254 1617 169 72 0 chr2 240031681 240031959 -13224624 + AluJo SINE Alu 1 298 -14 22 103 0 0 chr2 240032978 240033056 -13223527 + AT_rich Low_complexity Low_complexity 1 78 0 1447 129 67 0 chr2 240033107 240033362 -13223221 - L1MA5A LINE L1 -3 6294 6023 1373 216 14 17 chr2 240034963 240035259 -13221324 - AluJo SINE Alu -17 295 1 1646 178 0 42 chr2 240035259 240035567 -13221016 - AluJb SINE Alu -16 296 1 180 364 91 9 chr2 240035580 240035690 -13220893 - L2 LINE L2 -12 3260 3142 1998 144 10 3 chr2 240035723 240036021 -13220562 - AluSx SINE Alu -12 300 1 311 125 0 42 chr2 240036026 240036074 -13220509 - Alu SINE Alu -256 47 2 2353 50 42 3 chr2 240036085 240036368 -13220215 - AluY SINE Alu -17 294 1 586 247 113 25 chr2 240036772 240037011 -13219572 + MIR SINE MIR 3 262 0 1326 213 16 0 chr2 240037013 240037267 -13219316 - AluJo SINE Alu -13 299 42 332 224 0 24 chr2 240037961 240038046 -13218537 - L1MC4 LINE L1 0 8042 7960 2327 107 0 3 chr2 240038083 240038391 -13218192 - AluSc SINE Alu -2 307 1 21 0 0 0 chr2 240038421 240038442 -13218141 + AT_rich Low_complexity Low_complexity 1 21 0 2338 107 7 3 chr2 240038498 240038808 -13217775 - AluSx SINE Alu -1 311 1 2366 84 3 0 chr2 240039539 240039838 -13216745 - AluSp SINE Alu -13 300 1 1188 174 78 4 chr2 240039839 240040081 -13216502 - L1MC3 LINE L1 -7 7778 7519 303 198 10 62 chr2 240040157 240040253 -13216330 - L1ME4a LINE L1 -68 6053 5963 1948 153 17 0 chr2 240040392 240040692 -13215891 - AluSx SINE Alu -7 305 1 1785 138 0 65 chr2 240040773 240041098 -13215485 - AluJb SINE Alu -8 304 1 221 276 181 8 chr2 240041241 240041432 -13215151 + L2 LINE L2 2766 3070 -243 290 273 163 37 chr2 240041447 240041768 -13214815 - MLT1J LTR MaLR -9 502 225 315 71 0 0 chr2 240041794 240041836 -13214747 + (A)n Simple_repeat Simple_repeat 1 42 0 1140 198 128 41 chr2 240042070 240042429 -13214154 - Charlie4a DNA MER1_type -1461 500 103 1891 136 13 33 chr2 240042429 240042730 -13213853 - AluSx SINE Alu -17 295 1 1140 198 128 41 chr2 240042730 240042759 -13213824 - Charlie4a DNA MER1_type -1858 103 78 254 228 161 81 chr2 240042840 240042989 -13213594 - MLT1L LTR MaLR -453 162 2 1814 148 7 7 chr2 240043196 240043474 -13213109 - AluSx SINE Alu -16 296 19 230 93 23 23 chr2 240043578 240043621 -13212962 - AluSx SINE Alu -257 43 1 775 253 70 9 chr2 240043770 240043999 -13212584 - MIR SINE MIR -13 249 7 1926 128 0 59 chr2 240044082 240044288 -13212295 + AluJo SINE Alu 1 183 -129 2390 95 3 0 chr2 240044288 240044594 -13211989 - AluSp SINE Alu -5 308 2 1926 128 0 59 chr2 240044594 240044708 -13211875 + AluJo SINE Alu 183 302 -10 1296 134 9 141 chr2 240044770 240044889 -13211694 + MLT1D LTR MaLR 1 134 -371 1871 109 106 0 chr2 240044889 240045164 -13211419 - AluSq SINE Alu -9 304 1 1296 134 9 141 chr2 240045164 240045364 -13211219 + MLT1D LTR MaLR 134 278 -227 1661 187 0 13 chr2 240045367 240045677 -13210906 + AluSx SINE Alu 6 311 -1 1460 142 43 0 chr2 240045680 240045912 -13210671 + MSTA LTR MaLR 187 428 0 1687 147 16 0 chr2 240045957 240046208 -13210375 - AluJb SINE Alu 0 312 58 640 146 10 0 chr2 240046208 240046304 -13210279 + AluJb SINE Alu 198 294 -18 767 154 0 46 chr2 240046351 240046481 -13210102 - FLAM_A SINE Alu -9 124 1 340 331 53 0 chr2 240046483 240046652 -13209931 - MIR SINE MIR -62 200 23 2037 125 0 44 chr2 240047327 240047646 -13208937 + AluSx SINE Alu 1 305 -7 1707 106 0 0 chr2 240047973 240048191 -13208392 - AluSx SINE Alu -94 218 1 201 202 12 24 chr2 240048276 240048360 -13208223 + (TA)n Simple_repeat Simple_repeat 2 84 0 721 188 0 0 chr2 240048360 240048472 -13208111 - FLAM_C SINE Alu -30 113 2 2272 82 28 0 chr2 240048503 240048794 -13207789 - AluSq SINE Alu -14 299 1 2157 110 0 14 chr2 240049072 240049388 -13207195 - AluSq SINE Alu 0 312 1 1682 158 7 44 chr2 240049398 240049575 -13207008 - AluJb SINE Alu -25 287 124 216 0 0 0 chr2 240049575 240049599 -13206984 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1682 158 7 44 chr2 240049599 240049718 -13206865 - AluJb SINE Alu -188 124 2 405 221 103 65 chr2 240049720 240049939 -13206644 + L1MC5 LINE L1 7653 7885 -76 2367 107 3 0 chr2 240049939 240050249 -13206334 + AluSq SINE Alu 1 311 -2 405 221 103 65 chr2 240050249 240050292 -13206291 + L1MC5 LINE L1 7885 7925 -36 585 196 0 0 chr2 240050293 240050390 -13206193 + MER93b LTR ERV1 1 97 -276 880 123 8 0 chr2 240050392 240050514 -13206069 + FLAM_C SINE Alu 1 123 -20 28 29 0 0 chr2 240050514 240050549 -13206034 + AT_rich Low_complexity Low_complexity 1 35 0 661 206 35 61 chr2 240050561 240050789 -13205794 + MER93b LTR ERV1 93 314 -59 2286 99 7 0 chr2 240050858 240051151 -13205432 - AluSq SINE Alu -18 295 1 496 91 0 0 chr2 240051683 240051749 -13204834 + AluJ/FLAM SINE Alu 2 67 -245 916 95 0 0 chr2 240051749 240051865 -13204718 + AluSp/q SINE Alu 168 283 -30 1875 154 3 26 chr2 240051914 240052220 -13204363 + AluJb SINE Alu 1 299 -13 285 214 143 0 chr2 240052771 240052841 -13203742 - MLT1B LTR MaLR -310 80 1 211 258 194 0 chr2 240053378 240053440 -13203143 - MIR SINE MIR -107 101 28 2024 146 0 10 chr2 240053617 240053925 -13202658 - AluJb SINE Alu -7 305 1 2205 102 7 0 chr2 240053954 240054248 -13202335 - AluSg SINE Alu -14 296 1 773 122 0 0 chr2 240054268 240054375 -13202208 - U6 snRNA snRNA 0 107 1 365 290 136 17 chr2 240054431 240054607 -13201976 + L1ME LINE L1 5482 5678 -443 2386 81 7 0 chr2 240054611 240054908 -13201675 - AluSg SINE Alu -11 299 1 306 150 76 14 chr2 240054954 240055027 -13201556 + AluSg/x SINE Alu 120 190 -112 2391 81 7 13 chr2 240055392 240055701 -13200882 + AluSq SINE Alu 1 307 -6 1598 168 67 28 chr2 240055712 240055997 -13200586 + AluJb SINE Alu 1 296 -16 536 223 81 120 chr2 240056146 240056308 -13200275 + MLT1L LTR MaLR 123 271 -344 2292 113 0 3 chr2 240056308 240056618 -13199965 - AluSx SINE Alu -3 309 1 536 223 81 120 chr2 240056618 240056738 -13199845 + MLT1L LTR MaLR 271 394 -221 997 260 154 14 chr2 240056904 240057262 -13199321 - HsTC2 DNA Tc2 -182 1716 1309 2214 177 82 36 chr2 240057279 240057320 -13199263 - L1MC/D LINE L1 -497 5745 5707 851 144 0 23 chr2 240057320 240057452 -13199131 - FLAM_C SINE Alu -4 129 1 2214 177 82 36 chr2 240057452 240057976 -13198607 - L1MC/D LINE L1 -535 5707 5134 2271 108 13 0 chr2 240057976 240058283 -13198300 - AluY SINE Alu 0 311 1 2214 177 82 36 chr2 240058283 240058301 -13198282 - L1MC/D LINE L1 -1108 5134 5118 1041 149 0 6 chr2 240058312 240058473 -13198110 + AluJb SINE Alu 140 299 -13 1840 134 51 7 chr2 240058628 240058904 -13197679 + AluSx SINE Alu 1 288 -24 1707 193 0 0 chr2 240058922 240059222 -13197361 + AluJb SINE Alu 1 300 -12 43 56 0 0 chr2 240059454 240059525 -13197058 + AT_rich Low_complexity Low_complexity 1 71 0 17034 38 1 6 chr2 240059600 240062309 -13194274 + L1PA5 LINE L1 3440 6148 -6 183 139 0 0 chr2 240062320 240062356 -13194227 + (A)n Simple_repeat Simple_repeat 1 36 0 802 141 47 8 chr2 240062411 240062539 -13194044 + FLAM_C SINE Alu 1 133 0 1397 217 98 42 chr2 240062721 240062873 -13193710 + L1ME1 LINE L1 5675 5817 -349 2305 93 0 3 chr2 240062873 240063175 -13193408 + AluSg SINE Alu 3 303 -7 1397 217 98 42 chr2 240063175 240063479 -13193104 + L1ME1 LINE L1 5817 6157 -9 1217 237 57 83 chr2 240063536 240063946 -13192637 + L1MC4a LINE L1 5271 5690 -472 2588 65 0 0 chr2 240063946 240064256 -13192327 + AluY SINE Alu 1 310 -1 1217 237 57 83 chr2 240064256 240064326 -13192257 + L1MC4a LINE L1 5690 5704 -458 2191 111 0 0 chr2 240064326 240064615 -13191968 + AluSg SINE Alu 1 289 -21 1217 237 57 83 chr2 240064615 240064713 -13191870 + L1MC4a LINE L1 5704 5803 -359 2270 104 3 0 chr2 240064713 240065011 -13191572 + AluSx SINE Alu 1 299 -13 1491 217 42 3 chr2 240065021 240065139 -13191444 + AluJo SINE Alu 2 114 -198 468 0 0 0 chr2 240065139 240065191 -13191392 + (TAAAA)n Simple_repeat Simple_repeat 4 55 0 1491 217 42 3 chr2 240065191 240065358 -13191225 + AluJo SINE Alu 114 298 -14 501 313 66 64 chr2 240065359 240065500 -13191083 + L1MC4a LINE L1 4312 4451 -1695 1912 134 28 7 chr2 240065500 240065791 -13190792 - AluSx SINE Alu -15 297 1 501 313 66 64 chr2 240065791 240066016 -13190567 + L1MC4a LINE L1 4451 4682 -1464 2372 92 0 0 chr2 240066016 240066319 -13190264 + AluSc SINE Alu 1 303 -6 501 313 66 64 chr2 240066319 240066450 -13190133 + L1MC4a LINE L1 4682 4811 -1335 2144 90 3 7 chr2 240066565 240066855 -13189728 - AluSx SINE Alu -13 299 11 625 256 135 26 chr2 240067718 240068030 -13188553 + L1MC4a LINE L1 5586 5931 -1877 255 215 89 0 chr2 240068108 240068187 -13188396 + L1ME4a LINE L1 6034 6119 -2 797 217 13 0 chr2 240068465 240068617 -13187966 - FRAM SINE Alu -6 170 17 1873 103 157 0 chr2 240068682 240068943 -13187640 - AluSx SINE Alu 0 302 1 2089 116 0 10 chr2 240068991 240069285 -13187298 + AluY SINE Alu 1 291 -20 1197 215 12 4 chr2 240069505 240069751 -13186832 - AluJo SINE Alu -64 248 1 2318 114 0 0 chr2 240069822 240070130 -13186453 - AluSx SINE Alu -4 308 1 2581 53 0 3 chr2 240070130 240070433 -13186150 - AluY SINE Alu -8 303 2 2340 98 0 7 chr2 240070434 240070739 -13185844 - AluSx SINE Alu -9 303 1 420 197 30 138 chr2 240070740 240070848 -13185735 + L2 LINE L2 3053 3130 -183 1514 186 97 0 chr2 240070848 240071127 -13185456 + AluJo SINE Alu 1 306 -6 420 197 30 138 chr2 240071127 240071221 -13185362 + L2 LINE L2 3130 3233 -80 353 296 99 52 chr2 240071462 240071675 -13184908 + MIR SINE MIR 26 248 -14 1227 168 0 0 chr2 240071705 240071902 -13184681 - MLT1B LTR MaLR 0 390 194 920 191 187 54 chr2 240071913 240072462 -13184121 - LTR48 LTR ERV1 0 787 1 688 232 61 6 chr2 240072479 240072643 -13183940 - MLT1B LTR MaLR -217 173 1 2208 95 7 0 chr2 240072882 240073167 -13183416 + AluSx SINE Alu 1 287 -25 24 0 0 0 chr2 240073460 240073484 -13183099 + AT_rich Low_complexity Low_complexity 1 24 0 28 0 0 0 chr2 240073747 240073775 -13182808 + AT_rich Low_complexity Low_complexity 1 28 0 2338 96 0 13 chr2 240073842 240074156 -13182427 - AluSg SINE Alu 0 310 1 456 236 121 13 chr2 240074426 240074583 -13182000 - MIR SINE MIR -31 231 58 809 174 7 29 chr2 240074767 240074905 -13181678 - AluJo SINE Alu -176 136 2 2393 78 0 3 chr2 240075151 240075447 -13181136 + AluY SINE Alu 1 295 -16 35 0 0 0 chr2 240075679 240075714 -13180869 + AT_rich Low_complexity Low_complexity 1 35 0 1587 164 11 14 chr2 240075747 240076061 -13180522 - AluJo SINE Alu 0 318 6 1342 169 113 45 chr2 240076094 240076360 -13180223 - AluJo SINE Alu -18 284 1 2274 91 3 3 chr2 240076414 240076712 -13179871 + AluSx SINE Alu 1 298 -14 1549 204 65 52 chr2 240077218 240077483 -13179100 + L1M4 LINE L1 2782 3042 -3104 1838 140 33 42 chr2 240077483 240077790 -13178793 + AluJo SINE Alu 1 304 -8 1549 204 65 52 chr2 240077790 240078138 -13178445 + L1M4 LINE L1 3042 3403 -2743 2098 109 34 10 chr2 240078186 240078480 -13178103 - AluSx SINE Alu -11 301 1 2335 100 0 0 chr2 240078582 240078883 -13177700 + AluSx SINE Alu 1 301 -11 1527 208 23 10 chr2 240078891 240079199 -13177384 - AluJb SINE Alu 0 312 1 1768 173 7 0 chr2 240079343 240079644 -13176939 - AluJo SINE Alu -3 309 7 229 269 133 68 chr2 240080425 240080659 -13175924 + L1ME LINE L1 5579 5765 -356 822 69 0 0 chr2 240080729 240080830 -13175753 + AluY SINE Alu 1 101 -210 6170 185 50 15 chr2 240080955 240082220 -13174363 - L1 LINE L1 -1806 4340 3021 1890 164 10 0 chr2 240082220 240082525 -13174058 - AluJo SINE Alu -4 308 1 6170 185 50 15 chr2 240082525 240082632 -13173951 - L1 LINE L1 -3125 3021 2919 2327 109 0 3 chr2 240083009 240083313 -13173270 + AluSg SINE Alu 1 303 -7 24 53 0 0 chr2 240083397 240083435 -13173148 + AT_rich Low_complexity Low_complexity 1 38 0 2179 132 0 0 chr2 240083589 240083893 -13172690 + AluSq SINE Alu 1 304 -9 200 208 52 21 chr2 240084288 240084384 -13172199 + (TA)n Simple_repeat Simple_repeat 1 99 0 831 146 7 36 chr2 240085558 240085695 -13170888 + AluSq/x SINE Alu 1 133 -180 192 77 0 0 chr2 240085695 240085721 -13170862 + (GAAAA)n Simple_repeat Simple_repeat 4 29 0 2407 94 3 0 chr2 240087019 240087326 -13169257 - AluSp SINE Alu -5 308 1 2061 139 0 10 chr2 240087333 240087643 -13168940 - AluSg SINE Alu -3 307 1 447 290 23 34 chr2 240087650 240087826 -13168757 - ERVL LTR ERVL -425 5339 5166 892 177 13 6 chr2 240087830 240087988 -13168595 + L1PA16 LINE L1 5801 5959 -207 397 282 29 82 chr2 240088972 240089142 -13167441 - MIR3 SINE MIR -12 196 36 1007 114 0 0 chr2 240089281 240089412 -13167171 + AluSq/x SINE Alu 5 135 -178 1902 134 28 0 chr2 240089412 240089702 -13166881 + AluSx SINE Alu 1 298 -14 290 336 37 0 chr2 240089744 240089851 -13166732 + MER5A DNA MER1_type 50 160 -29 381 297 18 0 chr2 240090669 240090780 -13165803 + L2 LINE L2 3153 3265 -7 507 302 5 62 chr2 240090840 240090910 -13165673 + MIR SINE MIR 72 144 -118 2098 123 33 0 chr2 240090910 240091211 -13165372 + AluSx SINE Alu 1 311 -1 507 302 5 62 chr2 240091211 240091332 -13165251 + MIR SINE MIR 144 252 -10 2006 148 0 0 chr2 240091338 240091621 -13164962 + AluSx SINE Alu 1 283 -29 318 50 0 0 chr2 240091621 240091661 -13164922 + (TGAA)n Simple_repeat Simple_repeat 3 42 0 1763 154 4 11 chr2 240091911 240092190 -13164393 + AluJo SINE Alu 7 283 -29 234 0 0 0 chr2 240092193 240092219 -13164364 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 2155 125 3 0 chr2 240092284 240092581 -13164002 - AluSq SINE Alu -15 298 1 229 275 99 11 chr2 240092943 240093034 -13163549 - L2 LINE L2 -7 3265 3167 2150 128 3 7 chr2 240093472 240093777 -13162806 + AluSx SINE Alu 1 304 -8 1812 118 63 11 chr2 240094073 240094360 -13162223 - AluSc SINE Alu -7 302 1 1918 173 0 0 chr2 240094622 240094922 -13161661 + AluJb SINE Alu 2 301 -11 1057 184 10 5 chr2 240094936 240095142 -13161441 + L1MD3 LINE L1 7705 7911 -84 1906 127 25 7 chr2 240095169 240095297 -13161286 + AluSx SINE Alu 1 125 -187 216 0 0 0 chr2 240095297 240095321 -13161262 + (TAAAA)n Simple_repeat Simple_repeat 3 26 0 1906 127 25 7 chr2 240095321 240095476 -13161107 + AluSx SINE Alu 125 289 -23 2350 109 0 0 chr2 240095717 240096029 -13160554 + AluSx SINE Alu 1 312 0 2220 112 3 13 chr2 240096146 240096458 -13160125 + AluSx SINE Alu 1 309 -3 2180 118 7 0 chr2 240096923 240097229 -13159354 - AluSx SINE Alu -4 308 1 1631 106 0 21 chr2 240097368 240097603 -13158980 + L1PA14 LINE L1 5929 6158 -3 800 131 0 0 chr2 240097637 240097744 -13158839 + AluJb SINE Alu 11 117 -195 1689 171 3 0 chr2 240097975 240098262 -13158321 + AluSx SINE Alu 1 288 -24 408 86 0 99 chr2 240098270 240098331 -13158252 - L1MB8 LINE L1 -7 6171 6118 2119 118 3 0 chr2 240098331 240098627 -13157956 - AluSx SINE Alu -15 297 1 408 86 0 99 chr2 240098627 240098646 -13157937 - L1MB8 LINE L1 -60 6118 6099 378 213 117 11 chr2 240099997 240100091 -13156492 + AluSq/x SINE Alu 45 148 -155 1240 189 63 46 chr2 240100222 240100507 -13156076 + AluJo SINE Alu 3 292 -20 189 300 0 0 chr2 240100671 240100711 -13155872 + MIR SINE MIR 30 69 -139 2262 96 3 0 chr2 240101549 240101842 -13154741 - AluSx SINE Alu -18 294 1 316 267 166 32 chr2 240101864 240102051 -13154532 - L1MEd LINE L1 -3568 2561 2350 1322 193 68 17 chr2 240102057 240102352 -13154231 - L1MC1 LINE L1 -3 6330 6021 2011 86 97 0 chr2 240102583 240102852 -13153731 - AluSx SINE Alu -17 295 1 684 180 8 0 chr2 240103195 240103317 -13153266 - FRAM SINE Alu -3 173 51 397 288 76 38 chr2 240103348 240103613 -13152970 - L1MEd LINE L1 -4842 1287 1022 410 264 183 55 chr2 240103664 240104287 -13152296 - L1MEd LINE L1 -4842 1287 595 223 318 0 0 chr2 240104390 240104456 -13152127 + MER5A DNA MER1_type 124 189 0 524 139 0 0 chr2 240104783 240104862 -13151721 - U6 snRNA snRNA -28 79 1 389 235 0 0 chr2 240104957 240105042 -13151541 + L1ME2 LINE L1 5389 5473 -886 1102 176 6 0 chr2 240105043 240105225 -13151358 - AluSg/x SINE Alu -20 292 110 743 196 12 61 chr2 240105225 240105388 -13151195 + AluJo SINE Alu 31 185 -127 1744 221 63 34 chr2 240105389 240105897 -13150686 + L1ME2 LINE L1 5623 6145 -19 1941 157 10 0 chr2 240106316 240106621 -13149962 - AluJo SINE Alu -4 308 1 302 265 72 0 chr2 240106697 240106780 -13149803 - MIR SINE MIR -122 140 52 241 215 46 0 chr2 240106822 240106887 -13149696 - L1ME4a LINE L1 -115 6006 5939 310 317 67 19 chr2 240106900 240107108 -13149475 + L2 LINE L2 2991 3208 -105 355 335 60 0 chr2 240107198 240107398 -13149185 - L1MC4a LINE L1 -1966 5842 5631 1533 164 0 91 chr2 240107552 240107587 -13148996 - AluJo SINE Alu -2 310 273 180 0 0 0 chr2 240107587 240107607 -13148976 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1533 164 0 91 chr2 240107607 240107768 -13148815 - AluJo SINE Alu -39 273 155 1812 156 7 13 chr2 240107768 240108069 -13148514 - AluJb SINE Alu -13 299 1 1533 164 0 91 chr2 240108069 240108212 -13148371 - AluJo SINE Alu -157 155 1 2267 82 0 63 chr2 240108808 240109127 -13147456 + AluSx SINE Alu 1 299 -13 1379 139 9 5 chr2 240110384 240110607 -13145976 - AluJb SINE Alu -9 303 80 1260 179 111 79 chr2 240111064 240111506 -13145077 - LTR37B LTR ERV1 -7 461 6 373 312 148 11 chr2 240112158 240112347 -13144236 + MIR SINE MIR 37 251 -11 2093 117 3 17 chr2 240112441 240112741 -13143842 + AluSx SINE Alu 1 296 -16 293 298 167 20 chr2 240113206 240113404 -13143179 - MIR SINE MIR -5 257 31 835 208 0 12 chr2 240114039 240114216 -13142367 - MER7A DNA MER2_type -174 172 1 1306 234 13 13 chr2 240114218 240114522 -13142061 - AluJb SINE Alu -8 304 1 2250 118 0 13 chr2 240114667 240114982 -13141601 + AluSx SINE Alu 1 311 -1 1532 122 29 20 chr2 240115091 240115337 -13141246 - AluSx SINE Alu -20 292 45 259 287 43 32 chr2 240116016 240116110 -13140473 + MIR3 SINE MIR 91 185 -23 246 279 47 35 chr2 240116754 240116840 -13139743 + MER5B DNA MER1_type 98 173 -5 582 259 70 81 chr2 240116977 240117236 -13139347 - MIR SINE MIR 0 262 7 2134 138 0 0 chr2 240118241 240118546 -13138037 - AluSx SINE Alu -7 305 1 1618 175 31 20 chr2 240119945 240120237 -13136346 - AluSx SINE Alu -17 295 1 2593 51 0 6 chr2 240120326 240120637 -13135946 + AluY SINE Alu 1 309 -2 1743 156 80 0 chr2 240120856 240121145 -13135438 - AluSx SINE Alu 0 312 1 1254 134 0 5 chr2 240121557 240121743 -13134840 + AluSp SINE Alu 120 304 -9 315 333 72 14 chr2 240121975 240122113 -13134470 - L2 LINE L2 -2 3270 3125 2173 105 16 7 chr2 240122114 240122419 -13134164 + AluSq SINE Alu 1 308 -5 1775 179 0 7 chr2 240122795 240123091 -13133492 + AluJb SINE Alu 1 294 -18 278 274 44 26 chr2 240123239 240123352 -13133231 - MER104 DNA Tc2 0 180 66 2374 104 0 9 chr2 240123421 240123737 -13132846 + AluSq SINE Alu 1 313 0 486 77 39 26 chr2 240124013 240124091 -13132492 - U6 snRNA snRNA -28 79 1 216 0 0 0 chr2 240124169 240124193 -13132390 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1134 139 0 6 chr2 240124200 240124372 -13132211 - AluY SINE Alu -37 274 104 1537 83 0 0 chr2 240124421 240124625 -13131958 - AluSp SINE Alu -4 309 106 1412 75 0 61 chr2 240124688 240124901 -13131682 - AluSp SINE Alu -8 305 106 1427 80 0 61 chr2 240124964 240125176 -13131407 - AluSq SINE Alu -9 304 106 1279 77 18 0 chr2 240125256 240125426 -13131157 - AluSp SINE Alu -4 309 137 1493 124 0 31 chr2 240125611 240125836 -13130747 + AluSg/x SINE Alu 80 297 -13 1772 149 10 7 chr2 240126009 240126310 -13130273 + AluJb SINE Alu 2 303 -9 1829 168 124 24 chr2 240126691 240127103 -13129480 + MLT1C LTR MaLR 1 453 -14 2390 85 0 0 chr2 240127382 240127689 -13128894 + AluY SINE Alu 1 307 -4 383 267 67 33 chr2 240127882 240127943 -13128640 + MLT1J LTR MaLR 8 65 -446 2215 114 3 0 chr2 240127943 240128241 -13128342 + AluSx SINE Alu 1 299 -13 383 267 67 33 chr2 240128241 240128329 -13128254 + MLT1J LTR MaLR 65 162 -349 218 206 0 48 chr2 240128534 240128597 -13127986 + T-rich Low_complexity Low_complexity 3 62 0 410 306 119 18 chr2 240129331 240129550 -13127033 + MLT1K LTR MaLR 342 582 -6 2329 112 128 16 chr2 240130028 240130411 -13126172 + MSTA LTR MaLR 3 428 0 2584 64 0 3 chr2 240130789 240131101 -13125482 - AluY SINE Alu 0 311 1 1982 116 4 0 chr2 240131538 240131814 -13124769 - AluSx SINE Alu -35 277 1 2272 106 3 0 chr2 240131949 240132252 -13124331 + AluSq SINE Alu 1 304 -9 195 274 161 16 chr2 240132523 240132647 -13123936 + L2 LINE L2 2915 3056 -216 253 270 32 0 chr2 240132991 240133054 -13123529 + L2 LINE L2 3208 3272 0 2345 104 0 3 chr2 240133093 240133402 -13123181 + AluSq SINE Alu 1 308 -5 345 307 231 25 chr2 240133855 240134223 -13122360 - L2 LINE L2 -764 2550 2107 832 174 8 0 chr2 240134224 240134356 -13122227 + FLAM_C SINE Alu 1 133 0 370 247 73 90 chr2 240134558 240134632 -13121951 + L1ME LINE L1 5491 5565 -556 1214 255 88 53 chr2 240134632 240135026 -13121557 + MLT1J LTR MaLR 1 380 -131 207 0 0 0 chr2 240135026 240135049 -13121534 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 2213 97 0 3 chr2 240135052 240135340 -13121243 - AluSg SINE Alu -23 287 1 1214 255 88 53 chr2 240135340 240135432 -13121151 + MLT1J LTR MaLR 381 508 -3 370 247 73 90 chr2 240135432 240135535 -13121048 + L1ME LINE L1 5565 5665 -456 243 0 0 0 chr2 240135746 240135773 -13120810 + (CA)n Simple_repeat Simple_repeat 2 28 0 2245 120 0 0 chr2 240135852 240136153 -13120430 + AluSx SINE Alu 2 302 -10 2580 53 0 0 chr2 240136176 240136476 -13120107 + AluY SINE Alu 1 300 -11 1475 195 3 58 chr2 240136476 240136634 -13119949 - AluJo SINE Alu -19 293 158 2436 76 3 0 chr2 240136634 240136936 -13119647 - AluSp SINE Alu -10 303 1 1475 195 3 58 chr2 240136936 240137084 -13119499 - AluJo SINE Alu -154 158 4 25 0 0 0 chr2 240137084 240137109 -13119474 + AT_rich Low_complexity Low_complexity 1 25 0 342 194 0 15 chr2 240137245 240137312 -13119271 - LTR67 LTR ERVL -6 551 486 2168 79 0 0 chr2 240137683 240137948 -13118635 - AluSx SINE Alu -14 298 34 313 390 55 0 chr2 240138140 240138286 -13118297 + L2 LINE L2 3107 3260 -12 1881 132 38 11 chr2 240138996 240139283 -13117300 - AluJb SINE Alu -17 295 1 2332 94 7 0 chr2 240139385 240139735 -13116848 + AluSp SINE Alu 1 352 0 330 73 0 0 chr2 240139789 240139830 -13116753 - FLAM SINE Alu -8 125 85 279 241 176 0 chr2 240140005 240140113 -13116470 + L1ME4a LINE L1 5975 6101 -20 2419 76 0 0 chr2 240140153 240140443 -13116140 - AluSg SINE Alu -20 290 1 1884 75 53 60 chr2 240141205 240141486 -13115097 + AluY SINE Alu 1 279 -32 207 0 0 0 chr2 240141494 240141517 -13115066 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 731 244 107 5 chr2 240141719 240141924 -13114659 + MLT1F LTR MaLR 1 226 -316 2633 119 64 0 chr2 240141934 240142322 -13114261 - MER4E LTR ERV1 -366 413 1 1422 207 49 26 chr2 240142322 240142625 -13113958 + MLT1F LTR MaLR 232 541 -1 1972 154 3 6 chr2 240142819 240143130 -13113453 + AluSx SINE Alu 1 310 -2 605 274 30 0 chr2 240143150 240143314 -13113269 + MLT1-int LTR MaLR 433 601 -770 360 348 6 25 chr2 240143498 240143659 -13112924 + MLT1-int LTR MaLR 703 860 -511 813 223 53 71 chr2 240143696 240143978 -13112605 - MLT1B LTR MaLR -111 279 3 1898 133 26 0 chr2 240144043 240144313 -13112270 + AluSx SINE Alu 1 277 -35 353 256 99 72 chr2 240144465 240144727 -13111856 + L1 LINE L1 3566 3834 -2312 503 198 16 202 chr2 240145046 240145293 -13111290 - MIR SINE MIR -57 205 5 328 248 76 0 chr2 240145296 240145401 -13111182 + L1 LINE L1 4063 4175 -1971 2101 91 13 45 chr2 240145406 240145714 -13110869 + AluSg1 SINE Alu 1 298 -11 2343 104 3 0 chr2 240145722 240146031 -13110552 + AluSp SINE Alu 1 310 -3 354 250 133 17 chr2 240146218 240146338 -13110245 + L1MC/D LINE L1 5674 5807 -2001 228 35 0 0 chr2 240146421 240146450 -13110133 + (A)n Simple_repeat Simple_repeat 1 29 0 1847 104 35 8 chr2 240146466 240146771 -13109812 + AluSp SINE Alu 18 329 0 259 287 43 32 chr2 240147540 240147634 -13108949 + MIR3 SINE MIR 91 185 -23 246 279 47 35 chr2 240148278 240148364 -13108219 + MER5B DNA MER1_type 98 173 -5 582 259 70 81 chr2 240148501 240148760 -13107823 - MIR SINE MIR 0 262 7 2134 138 0 0 chr2 240149765 240150070 -13106513 - AluSx SINE Alu -7 305 1 1623 175 31 20 chr2 240151469 240151761 -13104822 - AluSx SINE Alu -17 295 1 2110 77 3 20 chr2 240151850 240152148 -13104435 + AluY SINE Alu 1 293 -18 306 288 80 88 chr2 240152206 240152258 -13104325 + MIR SINE MIR 12 63 -199 2053 125 30 0 chr2 240152258 240152561 -13104022 - AluSx SINE Alu 0 312 1 306 288 80 88 chr2 240152561 240152758 -13103825 + MIR SINE MIR 63 259 -3 2027 105 27 17 chr2 240153178 240153473 -13103110 - AluSg SINE Alu -12 298 1 410 211 0 3 chr2 240153499 240153622 -13102961 - AluJ/FRAM SINE Alu -13 299 135 503 152 0 0 chr2 240153628 240153707 -13102876 + MADE1 DNA Mariner 1 79 -1 1287 180 12 122 chr2 240153735 240154063 -13102520 + AluJb SINE Alu 1 292 -20 317 278 111 19 chr2 240154080 240154242 -13102341 + Tigger8 DNA MER2_type 271 447 -219 186 321 19 0 chr2 240154372 240154425 -13102158 - MIR3 SINE MIR -10 198 145 2137 125 0 7 chr2 240154436 240154739 -13101844 - AluSq SINE Alu -12 301 1 199 385 52 0 chr2 240155112 240155208 -13101375 - MIR SINE MIR -161 101 1 394 254 106 14 chr2 240155892 240156034 -13100549 - L1ME4a LINE L1 -7 6114 5960 427 304 149 7 chr2 240156307 240156616 -13099967 - L1ME4a LINE L1 -476 5645 5293 225 178 22 0 chr2 240156706 240156751 -13099832 - L1ME4a LINE L1 -1408 4738 4693 477 264 175 43 chr2 240157164 240157633 -13098950 - L1ME4a LINE L1 -204 5917 5387 2053 144 0 0 chr2 240158148 240158447 -13098136 - AluSx SINE Alu -11 301 3 833 128 0 45 chr2 240158451 240158584 -13097999 - FLAM_C SINE Alu -6 127 1 258 32 0 0 chr2 240158595 240158626 -13097957 + (T)n Simple_repeat Simple_repeat 1 31 0 265 228 120 87 chr2 240158634 240158875 -13097708 - L1ME LINE L1 -274 5847 5599 2236 144 66 18 chr2 240159003 240159407 -13097176 - MSTB LTR MaLR 0 409 1 1352 161 62 58 chr2 240159546 240159837 -13096746 - AluJb SINE Alu -20 292 1 21 0 0 0 chr2 240159957 240159978 -13096605 + AT_rich Low_complexity Low_complexity 1 21 0 461 284 47 18 chr2 240161705 240161874 -13094709 - MLT1I LTR MaLR -208 201 28 1725 178 21 3 chr2 240162227 240162514 -13094069 + AluJb SINE Alu 1 292 -20 2010 142 3 0 chr2 240163265 240163578 -13093005 + AluSx SINE Alu 1 314 0 455 92 0 0 chr2 240163667 240163732 -13092851 - L1PB3 LINE L1 -5 6149 6085 740 221 193 33 chr2 240164111 240164536 -13092047 - MER20B DNA MER1_type 0 783 291 1999 153 0 28 chr2 240165383 240165704 -13090879 - AluJb SINE Alu 0 312 1 23 0 0 0 chr2 240166321 240166344 -13090239 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 240166442 240166463 -13090120 + AT_rich Low_complexity Low_complexity 1 21 0 279 0 0 0 chr2 240166651 240166682 -13089901 + (CA)n Simple_repeat Simple_repeat 1 31 0 * 402 21 0 0 chr2 240166681 240166728 -13089855 + (TC)n Simple_repeat Simple_repeat 1 47 0 441 246 8 34 chr2 240167147 240167265 -13089318 + MER58A DNA MER1_type 4 118 0 33 0 0 0 chr2 240167373 240167406 -13089177 + AT_rich Low_complexity Low_complexity 1 33 0 2281 109 0 3 chr2 240167471 240167782 -13088801 - AluSg SINE Alu 0 310 1 21 36 0 0 chr2 240168182 240168210 -13088373 + AT_rich Low_complexity Low_complexity 1 28 0 695 161 0 0 chr2 240168557 240168675 -13087908 + AluSg/x SINE Alu 183 300 -10 27 0 0 0 chr2 240170044 240170071 -13086512 + AT_rich Low_complexity Low_complexity 1 27 0 25 65 0 0 chr2 240170586 240170632 -13085951 + AT_rich Low_complexity Low_complexity 1 46 0 1999 146 3 0 chr2 240172358 240172645 -13083938 - AluSx SINE Alu -24 288 1 1953 150 13 29 chr2 240173060 240173374 -13083209 - AluSx SINE Alu -1 311 3 2011 131 20 13 chr2 240174669 240174967 -13081616 - AluSx SINE Alu -12 300 1 203 342 18 0 chr2 240174981 240175056 -13081527 - MIR SINE MIR -78 130 53 234 91 0 0 chr2 240175090 240175123 -13081460 + (T)n Simple_repeat Simple_repeat 1 33 0 483 280 38 85 chr2 240175333 240175435 -13081148 - MIR SINE MIR -6 256 151 1969 158 0 10 chr2 240175435 240175745 -13080838 - AluSx SINE Alu -5 307 1 483 280 38 85 chr2 240175745 240175878 -13080705 - MIR SINE MIR -111 151 32 314 264 253 11 chr2 240176109 240176287 -13080296 + MIR SINE MIR 34 254 -8 1176 191 72 4 chr2 240176435 240176671 -13079912 + L1PB4 LINE L1 5896 6147 -9 234 0 0 0 chr2 240177021 240177047 -13079536 + (TATG)n Simple_repeat Simple_repeat 2 27 0 1690 124 16 4 chr2 240177047 240177305 -13079278 - AluSq SINE Alu -8 305 45 305 300 61 72 chr2 240177312 240177492 -13079091 + L3 LINE CR1 1252 1429 -148 31 26 0 0 chr2 240178263 240178301 -13078282 + AT_rich Low_complexity Low_complexity 1 38 0 3998 119 208 89 chr2 240178787 240180198 -13076385 - pTR5 LTR ERV1 0 2438 735 306 296 67 22 chr2 240180672 240180807 -13075776 - L1ME4a LINE L1 -6 6115 5975 1356 182 0 45 chr2 240180899 240181146 -13075437 - AluJo SINE Alu -76 236 1 314 275 133 40 chr2 240181290 240181592 -13074991 - HAL1 LINE L1 -225 2282 1953 486 243 120 51 chr2 240181669 240181945 -13074638 - HAL1 LINE L1 -698 1809 1515 379 264 18 9 chr2 240181976 240182086 -13074497 + MER81 DNA DNA 1 111 -3 1572 273 101 64 chr2 240182092 240183306 -13073277 - HAL1 LINE L1 -1246 1261 3 185 333 37 12 chr2 240183362 240183443 -13073140 - MIR SINE MIR -9 253 171 291 248 10 30 chr2 240183753 240183854 -13072729 - L1ME4a LINE L1 -338 5783 5685 21 0 0 0 chr2 240184044 240184065 -13072518 + AT_rich Low_complexity Low_complexity 1 21 0 3006 160 26 17 chr2 240184091 240184671 -13071912 - Tigger1 DNA MER2_type 0 2418 1834 1422 149 97 59 chr2 240184695 240184983 -13071600 - AluJo SINE Alu -13 299 1 568 266 133 5 chr2 240185205 240185393 -13071190 - MER58C DNA MER1_type -3 212 1 21 0 0 0 chr2 240186485 240186506 -13070077 + AT_rich Low_complexity Low_complexity 1 21 0 1409 199 40 40 chr2 240186829 240187130 -13069453 - AluJo SINE Alu -11 301 1 674 180 31 8 chr2 240187154 240187282 -13069301 - FLAM_C SINE Alu -12 131 1 369 198 0 0 chr2 240187603 240187684 -13068899 + GA-rich Low_complexity Low_complexity 4 84 0 410 247 25 5 chr2 240187689 240187838 -13068745 + L1ME1 LINE L1 5996 6148 -16 31 26 0 0 chr2 240188273 240188311 -13068272 + AT_rich Low_complexity Low_complexity 1 38 0 212 0 36 0 chr2 240189996 240190024 -13066559 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2066 104 0 0 chr2 240190026 240190304 -13066279 - AluSq SINE Alu -32 281 4 31 0 0 0 chr2 240190307 240190338 -13066245 + AT_rich Low_complexity Low_complexity 1 31 0 2465 72 0 7 chr2 240191027 240191331 -13065252 - AluY SINE Alu -9 302 1 1865 172 18 6 chr2 240191331 240191674 -13064909 - MER7A DNA MER2_type -1 345 1 21 0 0 0 chr2 240192924 240192945 -13063638 + AT_rich Low_complexity Low_complexity 1 21 0 2006 117 4 0 chr2 240193109 240193374 -13063209 - AluSx SINE Alu -46 266 1 488 268 39 54 chr2 240195030 240195235 -13061348 - MIR SINE MIR -1 261 60 205 157 20 78 chr2 240195657 240195708 -13060875 + MIR SINE MIR 114 161 -101 2018 145 3 0 chr2 240195946 240196249 -13060334 - AluSq SINE Alu -9 304 1 1878 153 7 7 chr2 240197148 240197442 -13059141 + AluJb SINE Alu 9 302 -10 466 278 101 6 chr2 240197974 240198143 -13058440 + MIR SINE MIR 19 203 -59 944 206 52 5 chr2 240198335 240198529 -13058054 - MER58A DNA MER1_type -18 206 4 208 135 0 0 chr2 240198824 240198861 -13057722 + (A)n Simple_repeat Simple_repeat 1 37 0 812 205 197 35 chr2 240199080 240199334 -13057249 - AluSc SINE Alu -4 295 1 23 33 0 0 chr2 240200189 240200219 -13056364 + AT_rich Low_complexity Low_complexity 1 30 0 1050 79 0 0 chr2 240200329 240200468 -13056115 - MER85 DNA T2_type 0 139 1 2137 135 0 0 chr2 240200756 240201060 -13055523 - AluSx SINE Alu -8 304 1 412 191 110 22 chr2 240201804 240201940 -13054643 + MER115 DNA AcHobo 512 659 -34 2098 109 18 0 chr2 240201952 240202237 -13054346 - AluSx SINE Alu -22 290 1 281 252 56 19 chr2 240202525 240202632 -13053951 - L1MC5 LINE L1 -102 7859 7749 506 238 0 0 chr2 240202633 240202734 -13053849 + Tigger3b DNA MER2_type 1 101 -1130 1082 71 97 77 chr2 240202781 240202977 -13053606 + MER30 DNA MER1_type 1 200 -30 1949 150 70 28 chr2 240202992 240203418 -13053165 + Tigger3b DNA MER2_type 305 748 -483 1124 119 12 0 chr2 240203418 240203586 -13052997 - AluSg/x SINE Alu -1 309 140 2257 107 0 0 chr2 240203770 240204059 -13052524 + AluSx SINE Alu 1 289 -23 494 220 46 0 chr2 240204068 240204177 -13052406 - FLAM_A SINE Alu -19 114 1 221 263 186 32 chr2 240204177 240204326 -13052257 - MIR SINE MIR -13 249 74 1720 123 41 19 chr2 240204372 240204640 -13051943 - AluSq SINE Alu -39 274 1 2155 104 3 13 chr2 240204670 240204968 -13051615 - AluSg SINE Alu -15 295 1 204 40 0 0 chr2 240204989 240205014 -13051569 + (GAAAA)n Simple_repeat Simple_repeat 4 28 0 2184 105 10 29 chr2 240205050 240205225 -13051358 - AluSg SINE Alu -2 308 140 2162 116 3 0 chr2 240205225 240205517 -13051066 - AluSp SINE Alu -20 293 1 2184 105 10 29 chr2 240205517 240205655 -13050928 - AluSg SINE Alu -170 140 1 998 170 0 12 chr2 240205670 240205835 -13050748 + FRAM SINE Alu 1 160 -16 2170 111 0 3 chr2 240205904 240206192 -13050391 - AluSg SINE Alu -18 292 6 361 330 28 28 chr2 240206206 240206382 -13050201 - MIR3 SINE MIR -18 190 15 22 35 0 0 chr2 240206649 240206678 -13049905 + AT_rich Low_complexity Low_complexity 1 29 0 2132 122 7 0 chr2 240206992 240207287 -13049296 - AluSx SINE Alu -15 297 1 1569 166 35 18 chr2 240207404 240207688 -13048895 - AluJo SINE Alu -21 291 3 280 135 0 19 chr2 240207689 240207741 -13048842 - AluJo SINE Alu -166 136 86 2144 132 0 0 chr2 240207883 240208178 -13048405 - AluY SINE Alu -16 295 1 2189 163 63 5 chr2 240208191 240208633 -13047950 + Tigger3b DNA MER2_type 763 1230 -1 725 250 153 72 chr2 240208779 240209408 -13047175 - L1MC5 LINE L1 -600 7430 6854 2000 111 85 20 chr2 240209408 240209760 -13046823 + THE1C LTR MaLR 1 375 0 725 250 153 72 chr2 240209760 240210885 -13045698 - L1MC5 LINE L1 -1176 6854 5530 383 289 94 52 chr2 240210928 240211337 -13045246 - L1MC5 LINE L1 -4306 2090 1630 460 248 10 0 chr2 240211356 240211457 -13045126 - FLAM_A SINE Alu -27 115 14 2253 96 3 10 chr2 240211472 240211785 -13044798 - AluY SINE Alu 0 311 1 400 149 149 0 chr2 240211788 240211862 -13044721 + AluSc SINE Alu 203 287 -22 505 268 59 80 chr2 240211874 240212518 -13044065 - L1MC5 LINE L1 -4828 1387 789 1946 137 0 3 chr2 240213012 240213319 -13043264 - AluSx SINE Alu 0 306 1 1230 196 47 50 chr2 240213435 240213777 -13042806 + MER58B DNA MER1_type 1 341 0 1241 241 72 17 chr2 240213786 240214131 -13042452 + Charlie1a DNA MER1_type 2 365 -1090 393 133 0 17 chr2 240214149 240214209 -13042374 - MER8 DNA MER2_type 0 239 181 1827 98 4 8 chr2 240214287 240214533 -13042050 + AluSx SINE Alu 1 245 -67 477 185 149 36 chr2 240214533 240214728 -13041855 + Charlie1a DNA MER1_type 1223 1439 -16 26 0 0 0 chr2 240215602 240215628 -13040955 + AT_rich Low_complexity Low_complexity 1 26 0 2022 140 0 0 chr2 240215628 240215914 -13040669 - AluSx SINE Alu -26 286 1 414 0 0 0 chr2 240216090 240216136 -13040447 + (TG)n Simple_repeat Simple_repeat 1 46 0 21 71 0 0 chr2 240216614 240216656 -13039927 + AT_rich Low_complexity Low_complexity 1 42 0 1963 121 0 51 chr2 240217282 240217597 -13038986 + AluSq SINE Alu 1 299 -14 2237 90 0 17 chr2 240221354 240221675 -13034908 - AluSx SINE Alu 0 312 1 2126 124 16 0 chr2 240222346 240222653 -13033930 - AluSx SINE Alu 0 312 1 2051 107 34 3 chr2 240222800 240223098 -13033485 + AluSq SINE Alu 5 311 -2 5205 119 19 17 chr2 240274647 240275486 -12981097 + L1PA10 LINE L1 5326 6166 -2 403 256 128 17 chr2 240275619 240275791 -12980792 + L1ME3A LINE L1 5949 6139 -31 196 274 41 27 chr2 240275929 240276002 -12980581 - MER5C DNA MER1_type -248 76 3 535 212 0 0 chr2 240276925 240277024 -12979559 - Tigger7 DNA MER2_type 0 2487 2389 * 845 200 18 12 chr2 240277022 240277187 -12979396 - Tigger7 DNA MER2_type -284 266 101 246 62 0 0 chr2 240277586 240277612 -12978971 + (TA)n Simple_repeat Simple_repeat 1 58 0 246 62 0 0 chr2 240277612 240277644 -12978939 + (TA)n Simple_repeat Simple_repeat 1 32 0 182 137 32 42 chr2 240277677 240277772 -12978811 + (TA)n Simple_repeat Simple_repeat 1 94 0 1748 172 37 76 chr2 240278947 240279353 -12977230 - MLT1B LTR MaLR 0 390 1 209 308 0 31 chr2 240279433 240279498 -12977085 + MIR SINE MIR 16 78 -130 610 272 26 47 chr2 240279674 240279816 -12976767 + MIR SINE MIR 13 152 -110 2164 142 34 3 chr2 240279816 240280169 -12976414 + THE1B LTR MaLR 1 364 0 610 272 26 47 chr2 240280169 240280217 -12976366 + MIR SINE MIR 152 199 -63 2219 125 30 38 chr2 240280469 240280836 -12975747 - THE1B LTR MaLR 0 364 1 4618 81 44 0 chr2 240280836 240281450 -12975133 - THE1B-int LTR MaLR 0 1580 940 2778 147 98 2 chr2 240281776 240282285 -12974298 - MER89 LTR ERV1 0 559 2 267 289 25 165 chr2 240283134 240283483 -12973100 + L2 LINE L2 2890 3166 -106 1829 156 0 3 chr2 240283483 240283778 -12972805 - AluJb SINE Alu -16 296 3 267 289 25 165 chr2 240283778 240283871 -12972712 + L2 LINE L2 3166 3270 -2 182 338 0 52 chr2 240284729 240284806 -12971777 - MIR SINE MIR -84 124 52 1262 249 71 65 chr2 240286754 240286837 -12969746 - MLT1J LTR MaLR 0 511 430 1745 163 10 29 chr2 240286837 240287144 -12969439 - AluJb SINE Alu -11 301 1 1262 249 71 65 chr2 240287144 240287435 -12969148 - MLT1J LTR MaLR -81 430 142 1829 145 186 14 chr2 240287435 240287800 -12968783 + MSTA LTR MaLR 1 428 0 9894 125 19 40 chr2 240287802 240289415 -12967168 + MSTA-int LTR MaLR 3 1580 0 2160 119 127 21 chr2 240289417 240289802 -12966781 + MSTA LTR MaLR 3 428 0 1262 249 71 65 chr2 240289802 240289910 -12966673 - MLT1J LTR MaLR -369 142 19 273 257 71 18 chr2 240290225 240290338 -12966245 - LTR67 LTR ERVL 0 557 439 261 331 14 58 chr2 240290493 240290632 -12965951 - MLT2E LTR ERVL -478 150 18 259 348 50 14 chr2 240290740 240290881 -12965702 - MIR SINE MIR 0 262 117 24 32 0 0 chr2 240291690 240291721 -12964862 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr2 240291774 240291795 -12964788 + (A)n Simple_repeat Simple_repeat 1 21 0 1933 163 3 38 chr2 240293268 240293636 -12962947 + L1MB2 LINE L1 5417 5771 -400 203 0 37 0 chr2 240293646 240293673 -12962910 + (TA)n Simple_repeat Simple_repeat 2 29 0 339 25 0 0 chr2 240294423 240294463 -12962120 + (TA)n Simple_repeat Simple_repeat 1 40 0 186 139 85 8 chr2 240294639 240294768 -12961815 + (TA)n Simple_repeat Simple_repeat 1 139 0 243 105 0 0 chr2 240294812 240294850 -12961733 + L1MB2 LINE L1 5782 5819 -349 1892 183 16 8 chr2 240294852 240295218 -12961365 + L1MB2 LINE L1 5795 6163 -8 189 107 0 0 chr2 240295514 240295542 -12961041 + (TATATG)n Simple_repeat Simple_repeat 3 30 0 624 254 86 47 chr2 240295856 240296135 -12960448 + HsTC2b DNA Tc2 4 293 -622 801 235 152 69 chr2 240296230 240296694 -12959889 - MLT1F1 LTR MaLR -8 534 46 678 228 139 46 chr2 240296723 240297004 -12959579 + MLT1I LTR MaLR 101 407 -2 2218 81 0 0 chr2 240297092 240297410 -12959173 + AluSq SINE Alu 1 318 0 718 267 83 43 chr2 240297410 240297450 -12959133 + HsTC2b DNA Tc2 545 582 -1316 1482 188 74 31 chr2 240297450 240297523 -12959060 + MER58B DNA MER1_type 3 71 -2349 2411 52 7 0 chr2 240297523 240297830 -12958753 - AluY SINE Alu -2 309 1 1482 188 74 31 chr2 240297830 240298081 -12958502 + MER58B DNA MER1_type 71 341 0 718 267 83 43 chr2 240298081 240298340 -12958243 + HsTC2b DNA Tc2 582 856 -62 1351 169 30 63 chr2 240298466 240298768 -12957815 - AluJo SINE Alu -20 292 1 1734 120 58 0 chr2 240298946 240299222 -12957361 + AluSx SINE Alu 20 311 -1 3501 208 38 60 chr2 240299825 240299861 -12956722 - L1ME1 LINE L1 -7 6159 6124 2195 98 7 0 chr2 240299861 240300158 -12956425 - AluSc SINE Alu -10 299 1 3501 208 38 60 chr2 240300158 240301024 -12955559 - L1ME1 LINE L1 -42 6124 5240 2186 119 0 0 chr2 240301024 240301336 -12955247 - AluSx SINE Alu 0 312 1 3501 208 38 60 chr2 240301336 240301550 -12955033 - L1ME1 LINE L1 -926 5240 5065 2277 210 46 50 chr2 240301550 240302175 -12954408 - MLT1E2 LTR MaLR -2 624 2 3501 208 38 60 chr2 240302175 240302275 -12954308 - L1ME1 LINE L1 -1101 5065 4964 225 0 0 0 chr2 240302311 240302336 -12954247 + (T)n Simple_repeat Simple_repeat 1 25 0 1672 112 3 87 chr2 240304190 240304511 -12952072 - AluJo SINE Alu -18 294 1 1153 210 131 44 chr2 240305192 240305620 -12950963 + MER31B LTR ERV1 2 661 0 204 40 0 0 chr2 240305978 240306003 -12950580 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 791 279 106 43 chr2 240306004 240306427 -12950156 - L2 LINE L2 -13 3300 2851 215 260 52 13 chr2 240306470 240306547 -12950036 - L2 LINE L2 -586 2728 2649 3865 107 50 4 chr2 240306824 240307367 -12949216 + MER61E LTR ERV1 2 569 0 207 206 0 32 chr2 240307592 240307655 -12948928 + (CAAA)n Simple_repeat Simple_repeat 3 63 0 363 284 65 65 chr2 240307848 240308003 -12948580 - MER5A DNA MER1_type -28 161 7 1809 98 38 67 chr2 240308621 240308936 -12947647 - AluSx SINE Alu -6 306 1 3044 150 20 83 chr2 240310826 240310930 -12945653 - LTR9 LTR ERV1 0 612 503 2404 69 0 0 chr2 240310930 240311233 -12945350 + AluY SINE Alu 1 303 -8 3044 150 20 83 chr2 240311233 240311781 -12944802 - LTR9 LTR ERV1 -109 503 1 295 344 89 20 chr2 240313342 240313644 -12942939 + HAL1b LINE L1 385 707 -641 2389 81 0 0 chr2 240314139 240314434 -12942149 - AluSg SINE Alu -14 296 2 312 239 194 33 chr2 240314835 240315015 -12941568 + L1MC4a LINE L1 6340 6548 -1260 183 80 0 0 chr2 240315015 240315040 -12941543 + (GGATG)n Simple_repeat Simple_repeat 3 27 0 332 269 69 130 chr2 240315125 240315339 -12941244 + MLT1H-int LTR MaLR 1033 1218 -153 1757 142 29 44 chr2 240315339 240315655 -12940928 - AluJb SINE Alu -1 311 1 332 269 69 130 chr2 240315655 240315801 -12940782 + MLT1H-int LTR MaLR 1218 1371 0 724 233 44 17 chr2 240315801 240315981 -12940602 + MLT1H LTR MaLR 1 185 -364 564 255 20 20 chr2 240315982 240316135 -12940448 + MLT1H1 LTR MaLR 396 548 -7 1187 105 6 0 chr2 240316220 240316382 -12940201 + AluSg/x SINE Alu 150 312 0 1320 226 97 107 chr2 240316385 240317168 -12939415 + L1MC5 LINE L1 6890 7664 -297 1440 178 13 57 chr2 240317551 240317865 -12938718 - AluJo SINE Alu -12 300 1 598 212 79 69 chr2 240319162 240319340 -12937243 - MIR SINE MIR -46 216 34 2241 105 3 0 chr2 240319340 240319634 -12936949 - AluSx SINE Alu -17 295 1 598 212 79 69 chr2 240319634 240319658 -12936925 - MIR SINE MIR -228 34 12 291 283 47 0 chr2 240319682 240319788 -12936795 - MIR SINE MIR -128 134 24 1010 217 62 4 chr2 240321370 240321610 -12934973 + LTR52-int LTR ERVL 3 256 -3300 3697 180 34 13 chr2 240321624 240322308 -12934275 + LTR52-int LTR ERVL 1395 2092 -3593 2110 183 53 63 chr2 240322467 240322960 -12933623 + LTR52-int LTR ERVL 2210 2697 -859 1948 133 0 0 chr2 240324183 240324461 -12932122 - AluJb SINE Alu -11 301 24 737 140 287 57 chr2 240324478 240324635 -12931948 - AluJo SINE Alu -33 279 87 202 315 0 0 chr2 240327264 240327318 -12929265 - MIR3 SINE MIR -12 196 143 188 125 0 31 chr2 240327750 240327782 -12928801 + MIR SINE MIR 50 80 -182 259 320 41 41 chr2 240329111 240329283 -12927300 - MIR SINE MIR -71 191 20 359 248 0 221 chr2 240329667 240329893 -12926690 + MER91B DNA MER1_type 1 176 -14 789 204 20 0 chr2 240330177 240330324 -12926259 + MER20 DNA MER1_type 70 219 0 301 203 0 31 chr2 240330573 240330637 -12925946 - MLT1I LTR MaLR -3 406 345 983 135 7 7 chr2 240330640 240330788 -12925795 + MER58A DNA MER1_type 1 148 0 696 306 70 12 chr2 240330825 240331083 -12925500 - MLT1I LTR MaLR -58 351 79 383 233 116 23 chr2 240331246 240331418 -12925165 + L1ME LINE L1 5490 5677 -444 458 235 59 17 chr2 240332112 240332231 -12924352 + L2 LINE L2 3187 3310 -3 9343 173 112 4 chr2 240332285 240335340 -12921243 - L1PB3 LINE L1 -2 6432 3041 6621 95 2 12 chr2 240335362 240336868 -12919715 - L1PA8A LINE L1 -28 6103 4612 * 11294 108 10 2 chr2 240336861 240338513 -12918070 + L1PA8A LINE L1 2942 4605 -1541 3383 173 76 3 chr2 240338511 240339509 -12917074 - L1PB3 LINE L1 -3368 3058 1517 * 807 159 8 15 chr2 240340087 240340219 -12916364 + FLAM_C SINE Alu 2 132 -11 228 319 14 0 chr2 240340225 240340321 -12916262 + A-rich Low_complexity Low_complexity 1 97 0 1733 169 18 0 chr2 240341113 240341392 -12915191 - AluSx SINE Alu -23 289 6 22 0 0 0 chr2 240341392 240341414 -12915169 + AT_rich Low_complexity Low_complexity 1 22 0 1018 153 74 5 chr2 240342027 240342243 -12914340 - AluSx SINE Alu -76 236 6 22 0 0 0 chr2 240342243 240342265 -12914318 + AT_rich Low_complexity Low_complexity 1 22 0 503 278 138 32 chr2 240342666 240343075 -12913508 + L1MC4a LINE L1 5466 5792 -329 8116 30 0 0 chr2 240343156 240344432 -12912151 - L1PA4 LINE L1 0 6155 4884 848 189 8 0 chr2 240344438 240344570 -12912013 - FLAM_C SINE Alu 0 133 1 323 219 49 20 chr2 240344611 240344711 -12911872 - MLT1I LTR MaLR 0 424 324 1033 228 58 90 chr2 240345057 240345215 -12911368 + MLT1J LTR MaLR 11 172 -339 1974 110 0 11 chr2 240345215 240345478 -12911105 - AluSx SINE Alu -14 298 39 1033 228 58 90 chr2 240345478 240345732 -12910851 + MLT1J LTR MaLR 172 410 -101 204 40 0 0 chr2 240345744 240345769 -12910814 + (TTA)n Simple_repeat Simple_repeat 2 26 0 2281 119 0 0 chr2 240345824 240346127 -12910456 - AluSx SINE Alu -9 303 1 271 290 10 20 chr2 240346584 240346684 -12909899 + MIR SINE MIR 104 202 -60 526 285 40 22 chr2 240347202 240347430 -12909153 + MER106A DNA MER1_type 5 236 0 1944 225 28 39 chr2 240347855 240348313 -12908270 + Charlie1a DNA MER1_type 1 453 -1002 3443 161 32 14 chr2 240348315 240348972 -12907611 + Charlie1a DNA MER1_type 787 1455 0 1238 132 20 5 chr2 240350448 240350645 -12905938 + L1MB3 LINE L1 5983 6182 -1 22 35 0 0 chr2 240351223 240351252 -12905331 + AT_rich Low_complexity Low_complexity 1 29 0 200 164 73 18 chr2 240351796 240351851 -12904732 - L2 LINE L2 -845 2469 2412 * 351 291 234 6 chr2 240351841 240352016 -12904567 + L2 LINE L2 2750 2964 -350 403 340 47 23 chr2 240352311 240352526 -12904057 - L2 LINE L2 -926 2388 2169 329 286 263 12 chr2 240352790 240353129 -12903454 + L2 LINE L2 1738 2161 -1153 192 77 0 0 chr2 240353414 240353440 -12903143 + (TA)n Simple_repeat Simple_repeat 2 27 0 2318 183 20 60 chr2 240353476 240354012 -12902571 - LTR68 LTR ERV1 0 740 226 350 251 111 40 chr2 240354071 240354270 -12902313 + LTR40a LTR ERVL 307 519 0 924 287 117 32 chr2 240354286 240354792 -12901791 + L2 LINE L2 2302 2850 -464 272 309 147 91 chr2 240354963 240356488 -12900095 - L2 LINE L2 -1406 1908 299 429 328 86 5 chr2 240361157 240361343 -12895240 + MIR SINE MIR 12 212 -50 286 298 102 71 chr2 240362470 240362792 -12893791 - L2 LINE L2 -14 3299 2968 1474 199 84 34 chr2 240363007 240363388 -12893195 + MLT1C LTR MaLR 54 453 -14 2433 93 0 0 chr2 240363764 240364066 -12892517 + AluSx SINE Alu 1 302 -10 826 264 32 28 chr2 240364300 240364559 -12892024 - MIR SINE MIR 0 262 5 296 205 249 2 chr2 240365449 240365547 -12891036 - MIR SINE MIR -77 131 14 384 276 40 53 chr2 240365585 240365743 -12890840 + L1MB7 LINE L1 5267 5423 -936 2377 99 0 6 chr2 240365743 240366056 -12890527 + AluSx SINE Alu 1 311 -1 384 276 40 53 chr2 240366056 240366125 -12890458 + L1MB7 LINE L1 5423 5491 -868 413 291 91 6 chr2 240366126 240366291 -12890292 + L1MB7 LINE L1 5523 5701 -420 321 234 0 0 chr2 240367105 240367185 -12889398 + L1MB7 LINE L1 6026 6106 -61 258 220 8 152 chr2 240367460 240367522 -12889061 - MER103 DNA DNA -45 121 52 1670 143 0 31 chr2 240367522 240367780 -12888803 + AluJo SINE Alu 1 250 -62 258 220 8 152 chr2 240367780 240367801 -12888782 - MER103 DNA DNA -114 52 60 2447 86 0 0 chr2 240367801 240368102 -12888481 + AluSg SINE Alu 1 301 -9 258 220 8 152 chr2 240368102 240368149 -12888434 - MER103 DNA DNA -105 61 9 2026 137 0 16 chr2 240368743 240369049 -12887534 + AluSx SINE Alu 1 301 -11 815 198 45 96 chr2 240369152 240369238 -12887345 - L1ME2 LINE L1 -4 6162 6073 1387 191 110 22 chr2 240369238 240369511 -12887072 + AluJo SINE Alu 1 297 -5 815 198 45 96 chr2 240369511 240369771 -12886812 - L1ME2 LINE L1 -93 6073 5810 563 229 14 42 chr2 240369776 240369840 -12886743 - HERV16 LTR ERVL -2217 2779 2715 2269 108 0 0 chr2 240369840 240370135 -12886448 - AluSc SINE Alu -14 295 1 563 229 14 42 chr2 240370135 240370214 -12886369 - HERV16 LTR ERVL -2281 2715 2640 492 290 0 14 chr2 240370221 240370366 -12886217 + LTR67 LTR ERVL 413 555 -2 681 107 25 0 chr2 240371226 240371348 -12885235 + GA-rich Low_complexity Low_complexity 2 126 0 1587 131 5 0 chr2 240373441 240373662 -12882921 + AluSp SINE Alu 81 302 -11 1554 172 88 9 chr2 240373678 240373997 -12882586 - MER2 DNA MER2_type 0 344 1 5002 241 46 36 chr2 240374310 240376337 -12880246 - L1MCb LINE L1 -2494 4070 2065 1918 70 0 0 chr2 240376337 240376567 -12880016 - AluY SINE Alu -1 310 81 5002 241 46 36 chr2 240376567 240376892 -12879691 - L1MCb LINE L1 -4499 2065 1745 2512 208 53 67 chr2 240376892 240377593 -12878990 - LTR8 LTR ERV1 0 691 1 5002 241 46 36 chr2 240377593 240378587 -12877996 - L1MCb LINE L1 -4819 1745 508 2119 116 0 23 chr2 240378587 240378889 -12877694 - AluSg SINE Alu -15 295 1 5002 241 46 36 chr2 240378889 240379401 -12877182 - L1MCb LINE L1 -6056 508 3 22 0 0 0 chr2 240379959 240379981 -12876602 + AT_rich Low_complexity Low_complexity 1 22 0 523 87 0 0 chr2 240380216 240380285 -12876298 + Alu SINE Alu 229 297 -12 2139 211 41 19 chr2 240380364 240380876 -12875707 - Charlie1b DNA MER1_type 0 523 1 226 300 0 0 chr2 240381019 240381079 -12875504 - MLT1I LTR MaLR -1 408 349 341 274 59 22 chr2 240381106 240381241 -12875342 - MLT1I LTR MaLR -134 275 136 249 271 57 0 chr2 240381304 240381374 -12875209 - HAL1 LINE L1 -823 1684 1611 537 294 73 32 chr2 240381522 240381934 -12874649 - HAL1 LINE L1 -1327 1180 752 2586 56 3 3 chr2 240382749 240383055 -12873528 - AluY SINE Alu -5 306 1 1702 192 21 27 chr2 240383265 240383603 -12872980 - MLT2D LTR ERVL 0 414 79 230 56 28 0 chr2 240385303 240385339 -12871244 + (TTCA)n Simple_repeat Simple_repeat 4 40 0 455 233 108 17 chr2 240385339 240385459 -12871124 - L2 LINE L2 -8 3264 3134 1185 146 35 5 chr2 240386100 240386299 -12870284 + MER2 DNA MER2_type 7 211 -134 2051 130 7 7 chr2 240386328 240386629 -12869954 - AluSx SINE Alu -11 301 1 3342 206 50 33 chr2 240386996 240388111 -12868472 + L1ME2 LINE L1 4943 6075 -89 251 340 97 19 chr2 240389534 240389740 -12866843 + L2 LINE L2 2629 2850 -464 201 244 0 22 chr2 240392383 240392428 -12864155 + GA-rich Low_complexity Low_complexity 4 47 0 669 157 0 0 chr2 240392748 240392882 -12863701 + (TCCA)n Simple_repeat Simple_repeat 2 135 0 551 310 89 57 chr2 240393839 240394368 -12862215 + L2 LINE L2 2196 2741 -573 5734 33 2 0 chr2 240402737 240403366 -12853217 + L1PA5 LINE L1 5520 6149 -5 2051 143 3 0 chr2 240404171 240404471 -12852112 + AluSx SINE Alu 1 301 -11 3171 117 51 4 chr2 240405127 240405613 -12850970 + MER75 DNA T2_type 6 514 0 222 37 0 0 chr2 240405764 240405791 -12850792 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 6260 108 8 4 chr2 240405796 240406082 -12850501 - L1PB1 LINE L1 -8 6859 6576 2107 116 0 30 chr2 240406082 240406384 -12850199 + AluSx SINE Alu 1 293 -19 6260 108 8 4 chr2 240406384 240406458 -12850125 - L1PB1 LINE L1 -291 6576 6504 263 91 0 23 chr2 240406458 240406502 -12850081 + (TA)n Simple_repeat Simple_repeat 2 44 0 6260 108 8 4 chr2 240406502 240407139 -12849444 - L1PB1 LINE L1 -363 6504 5858 12122 185 81 8 chr2 240407463 240407699 -12848884 - L1PB1 LINE L1 -1493 5369 5152 210 37 0 0 chr2 240407699 240407726 -12848857 + (TTG)n Simple_repeat Simple_repeat 2 28 0 12122 185 81 8 chr2 240407726 240412366 -12844217 - L1PB1 LINE L1 -1710 5152 139 263 203 34 0 chr2 240412600 240412659 -12843924 - MER89-int LTR ERV1 -3797 3004 2944 2031 228 93 40 chr2 240412975 240413567 -12843016 - MLT1E2 LTR MaLR 0 626 4 307 265 39 20 chr2 240413838 240413940 -12842643 - MER89-int LTR ERV1 -4445 2356 2253 472 191 148 26 chr2 240414615 240414730 -12841853 - FLAM_C SINE Alu -3 130 2 2346 100 0 3 chr2 240414762 240415071 -12841512 + AluSq SINE Alu 1 308 -5 1975 189 97 34 chr2 240417265 240417740 -12838843 + MLT1D LTR MaLR 1 505 0 1323 256 71 17 chr2 240417740 240418313 -12838270 + MLT1D-int LTR MaLR 1 610 -1008 537 256 26 97 chr2 240418413 240418484 -12838099 + MLT1D-int LTR MaLR 653 728 -643 6781 88 5 16 chr2 240418484 240418856 -12837727 + L1PA13 LINE L1 4391 4766 -1397 2686 105 5 30 chr2 240418856 240419229 -12837354 + THE1B LTR MaLR 1 364 0 6781 88 5 16 chr2 240419229 240420647 -12835936 + L1PA13 LINE L1 4766 6163 0 537 256 26 97 chr2 240420647 240420770 -12835813 + MLT1D-int LTR MaLR 728 833 -538 1501 211 144 24 chr2 240420770 240421187 -12835396 + MLT1D LTR MaLR 26 492 -13 236 278 28 0 chr2 240421491 240421599 -12834984 - L1ME LINE L1 -712 5450 5340 15360 137 42 6 chr2 240421738 240424071 -12832512 + Tigger1 DNA MER2_type 2 2418 0 2960 164 15 39 chr2 240424367 240425315 -12831268 - L1M2 LINE L1 -517 5795 4857 * 3813 174 53 7 chr2 240425310 240426071 -12830512 + L1M2 LINE L1 4079 4874 -1272 471 279 34 3 chr2 240426123 240426304 -12830279 - L1ME1 LINE L1 -5 6161 5969 652 256 0 0 chr2 240426304 240426433 -12830150 - FLAM_A SINE Alu -4 138 10 252 312 142 5 chr2 240426649 240426854 -12829729 - L1M4 LINE L1 -3594 2552 2320 27 96 0 0 chr2 240427264 240427347 -12829236 + AT_rich Low_complexity Low_complexity 1 83 0 336 357 56 30 chr2 240427356 240427661 -12828922 - HAL1 LINE L1 -755 1752 1440 276 264 37 102 chr2 240427683 240427899 -12828684 - L1MC4 LINE L1 -15 8027 7826 1799 241 51 17 chr2 240427936 240428462 -12828121 - L1ME2 LINE L1 -10 6154 5611 437 222 67 78 chr2 240428463 240428643 -12827940 - LTR40b LTR ERVL -160 302 125 356 225 275 25 chr2 240428747 240428907 -12827676 - LTR40a LTR ERVL -319 200 1 748 176 0 8 chr2 240429037 240429156 -12827427 + FLAM_C SINE Alu 3 120 -23 787 245 112 129 chr2 240429268 240430224 -12826359 - HERVL68 LTR ERVL -327 2710 1771 325 246 90 41 chr2 240430211 240430333 -12826250 - HERVL40 LTR ERVL -1650 3880 3753 * 227 202 121 61 chr2 240431037 240431136 -12825447 - MLT1J LTR MaLR 0 511 407 22 0 0 0 chr2 240431506 240431528 -12825055 + AT_rich Low_complexity Low_complexity 1 22 0 231 281 16 0 chr2 240433273 240433337 -12823246 - MER81 DNA DNA -2 112 48 249 297 27 0 chr2 240434894 240434968 -12821615 + MIR3 SINE MIR 83 158 -50 636 14 0 0 chr2 240434976 240435049 -12821534 + (TTTC)n Simple_repeat Simple_repeat 2 74 0 6549 61 31 5 chr2 240435052 240435933 -12820650 - L1PA7 LINE L1 -19 6135 5205 1868 126 19 0 chr2 240436033 240436295 -12820288 - AluSx SINE Alu -45 267 1 321 350 39 33 chr2 240437447 240437627 -12818956 + MIR SINE MIR 7 187 -75 3539 188 47 22 chr2 240437787 240438552 -12818031 - L1MB7 LINE L1 -10 6174 5391 1792 168 10 0 chr2 240439852 240440156 -12816427 - AluSx SINE Alu -5 307 1 187 345 61 34 chr2 240440185 240440333 -12816250 + L2 LINE L2 2978 3129 -143 1553 228 0 7 chr2 240442477 240442775 -12813808 + AluJb SINE Alu 1 296 -16 488 213 35 22 chr2 240443501 240443671 -12812912 - MER57A LTR ERV1 -4 399 196 646 198 43 56 chr2 240443674 240443836 -12812747 - MER93b LTR ERV1 -213 160 1 493 257 7 50 chr2 240445234 240445374 -12811209 - MER5B DNA MER1_type -19 159 26 417 279 66 15 chr2 240445400 240445536 -12811047 + MER5B DNA MER1_type 33 175 -3 17354 188 54 7 chr2 240445585 240448658 -12807925 + L1PB1 LINE L1 3 2930 -3937 1956 103 0 33 chr2 240448658 240448931 -12807652 + AluY SINE Alu 35 298 -13 17354 188 54 7 chr2 240448931 240451921 -12804662 + L1PB1 LINE L1 2930 6354 -513 315 158 0 40 chr2 240451921 240451997 -12804586 + MER52A LTR ERV1 1 73 -1682 6637 203 72 22 chr2 240452902 240454416 -12802167 + MER52A LTR ERV1 34 1755 0 348 140 53 0 chr2 240454416 240454473 -12802110 + L1PB1 LINE L1 6351 6410 -457 330 26 0 0 chr2 240454473 240454512 -12802071 + (TA)n Simple_repeat Simple_repeat 1 39 0 * 366 42 0 0 chr2 240454511 240454559 -12802024 + (CA)n Simple_repeat Simple_repeat 2 49 0 2761 82 6 0 chr2 240454559 240454911 -12801672 + L1PB1 LINE L1 6509 6862 -5 1990 196 76 13 chr2 240454962 240455411 -12801172 - LTR53 LTR ERVL -41 478 2 965 176 5 0 chr2 240458805 240458993 -12797590 + L1MA7 LINE L1 6088 6276 -15 246 266 44 53 chr2 240459221 240459334 -12797249 + MER34 LTR ERV1 1 112 -430 * 519 262 102 44 chr2 240459306 240459581 -12797002 + LTR48 LTR ERV1 163 453 -334 449 211 94 39 chr2 240459641 240459821 -12796762 + MER34 LTR ERV1 353 542 0 505 289 188 11 chr2 240459823 240460200 -12796383 + LTR16A1 LTR ERVL 11 454 -3 2713 322 67 40 chr2 240460861 240462929 -12793654 + HERV16 LTR ERVL 827 3010 -1986 598 252 93 37 chr2 240463190 240463404 -12793179 + MIR SINE MIR 2 227 -35 227 302 104 9 chr2 240463461 240463567 -12793016 - LTR67 LTR ERVL 0 557 442 25 31 0 0 chr2 240463670 240463702 -12792881 + AT_rich Low_complexity Low_complexity 1 32 0 325 299 17 8 chr2 240465050 240465167 -12791416 + L1ME LINE L1 3 120 -5950 499 337 39 0 chr2 240465208 240465413 -12791170 + L1ME LINE L1 206 418 -5652 4122 45 0 8 chr2 240466772 240467283 -12789300 - L1PA5 LINE L1 0 6154 5648 1638 48 31 0 chr2 240467283 240467510 -12789073 + L1P LINE L1 4629 4862 -1284 2168 107 166 14 chr2 240468889 240469311 -12787272 + LTR19A LTR ERV1 1 486 0 756 140 0 0 chr2 240474574 240474688 -12781895 - AluSg/x SINE Alu -7 303 190 545 288 85 30 chr2 240474944 240475541 -12781042 - L1MC4a LINE L1 -730 5432 5262 1988 134 40 37 chr2 240475956 240476330 -12780253 + THE1C LTR MaLR 1 375 0 483 286 157 15 chr2 240476826 240477235 -12779348 - L1MC4a LINE L1 -1293 4853 4387 2659 187 35 15 chr2 240477242 240477923 -12778660 + Tigger7 DNA MER2_type 2 2581 -6 346 289 176 21 chr2 240478067 240478351 -12778232 - L1M4 LINE L1 -1538 4608 4281 283 263 115 50 chr2 240478467 240478745 -12777838 - L1M4 LINE L1 -1978 4168 3873 2358 265 117 42 chr2 240478755 240479686 -12776897 - HAL1 LINE L1 -4 2503 1644 2300 85 7 3 chr2 240479686 240479979 -12776604 - AluSc SINE Alu -15 294 1 2358 265 117 42 chr2 240479979 240480666 -12775917 - HAL1 LINE L1 -863 1644 763 235 274 57 24 chr2 240480871 240480995 -12775588 - HAL1 LINE L1 -2363 144 17 928 324 69 70 chr2 240480999 240482181 -12774402 - L1M4 LINE L1 -2283 3863 2683 477 288 33 60 chr2 240482373 240482675 -12773908 - MER41E LTR ERV1 -53 459 166 277 291 18 55 chr2 240482990 240483100 -12773483 + MIR SINE MIR 157 262 0 383 346 57 22 chr2 240483165 240483480 -12773103 - L1M4 LINE L1 -3528 2618 2293 508 138 3 3 chr2 240483480 240483591 -12772992 - MSTA LTR MaLR 0 428 254 40941 34 24 1 chr2 240483591 240489035 -12767548 - L1P2 LINE L1 -577 5578 7 4409 223 84 7 chr2 240489037 240489604 -12766979 - L1P LINE L1 -2619 3527 3005 5264 77 36 1 chr2 240489604 240490334 -12766249 - L1PA11 LINE L1 0 6174 5420 4409 223 84 7 chr2 240490334 240491210 -12765373 - L1P LINE L1 -3141 3005 1981 2398 263 64 28 chr2 240491217 240493707 -12762876 - L1 LINE L1 -3188 3162 780 1099 294 10 37 chr2 240494304 240494712 -12761871 - L1 LINE L1 -5699 582 186 375 223 75 0 chr2 240494707 240494801 -12761782 + L1ME LINE L1 5610 5710 -456 * 1056 240 54 0 chr2 240494869 240495354 -12761229 - L1M4 LINE L1 -645 5539 5034 705 199 119 0 chr2 240495383 240495534 -12761049 - MER45A DNA AcHobo -9 169 1 2182 200 59 12 chr2 240495537 240496128 -12760455 - L1M4 LINE L1 -1129 5017 4399 2134 133 0 0 chr2 240496248 240496549 -12760034 + AluSx SINE Alu 1 301 -11 195 42 0 0 chr2 240496966 240496990 -12759593 + (TTG)n Simple_repeat Simple_repeat 2 25 0 904 299 69 69 chr2 240497043 240497596 -12758987 - L2 LINE L2 -10 3303 2735 516 262 143 45 chr2 240497597 240497965 -12758618 - L1M4 LINE L1 -489 5685 5292 432 278 58 87 chr2 240498035 240498179 -12758404 - L1M4 LINE L1 -1373 4773 4626 1516 226 7 0 chr2 240498179 240498466 -12758117 - AluJb SINE Alu -21 291 3 432 278 58 87 chr2 240498466 240498702 -12757881 - L1M4 LINE L1 -1520 4626 4404 1708 161 143 34 chr2 240498769 240499155 -12757428 - MSTA LTR MaLR 0 428 1 288 264 0 0 chr2 240499313 240499400 -12757183 + (TA)n Simple_repeat Simple_repeat 1 87 0 532 152 98 0 chr2 240500763 240500895 -12755688 + L1M4 LINE L1 3841 3985 -2161 237 225 157 0 chr2 240500918 240501007 -12755576 + L1ME2 LINE L1 3881 3983 -2163 1441 190 31 42 chr2 240501013 240501302 -12755281 + AluJo SINE Alu 7 292 -20 898 60 60 6 chr2 240501318 240501484 -12755099 + GA-rich Low_complexity Low_complexity 3 177 0 1297 261 112 15 chr2 240501519 240502124 -12754459 + L1ME2 LINE L1 4028 4691 -1455 1781 235 96 7 chr2 240502131 240503109 -12753474 + L1ME2 LINE L1 4728 6005 -159 23 0 0 0 chr2 240504743 240504766 -12751817 + AT_rich Low_complexity Low_complexity 1 23 0 358 315 9 18 chr2 240505700 240505811 -12750772 - L2 LINE L2 -9 3263 3154 21 0 0 0 chr2 240506975 240506996 -12749587 + AT_rich Low_complexity Low_complexity 1 21 0 1363 226 0 34 chr2 240507450 240507773 -12748810 - AluJo SINE Alu 0 312 1 419 185 11 33 chr2 240508808 240508900 -12747683 - MER21B LTR ERV1 -773 90 1 222 274 0 0 chr2 240509042 240509093 -12747490 + GA-rich Low_complexity Low_complexity 1 51 0 298 274 119 30 chr2 240509169 240509337 -12747246 - MIR SINE MIR -74 188 6 454 184 0 0 chr2 240509588 240509675 -12746908 + Tigger5 DNA MER2_type 2237 2323 0 13683 196 40 32 chr2 240509677 240513223 -12743360 - L1M2 LINE L1 -623 6628 3111 1946 121 25 4 chr2 240513223 240513549 -12743034 - AluSx SINE Alu 0 332 1 13683 196 40 32 chr2 240513549 240513804 -12742779 - L1M2 LINE L1 -4140 3111 2859 1907 183 0 3 chr2 240513804 240514115 -12742468 - AluJb SINE Alu -2 310 1 13683 196 40 32 chr2 240514115 240514187 -12742396 - L1M2 LINE L1 -4392 2859 2789 1888 120 51 7 chr2 240514187 240514463 -12742120 + AluSc SINE Alu 1 288 -21 13683 196 40 32 chr2 240514463 240516003 -12740580 - L1M2 LINE L1 -4462 2789 1475 2242 111 0 19 chr2 240516277 240516593 -12739990 - AluSg SINE Alu 0 310 1 631 245 31 6 chr2 240516859 240517022 -12739561 + MLT1D LTR MaLR 274 440 -65 1960 191 55 29 chr2 240518278 240518769 -12737814 + MLT1D LTR MaLR 1 504 -1 457 272 0 0 chr2 240518770 240518895 -12737688 + MLT1D-int LTR MaLR 1 125 -1246 12867 120 26 13 chr2 240518898 240518965 -12737618 + Tigger1 DNA MER2_type 392 457 -1961 2669 52 0 0 chr2 240518965 240519273 -12737310 + AluY SINE Alu 1 308 -3 12867 120 26 13 chr2 240519273 240520563 -12736020 + Tigger1 DNA MER2_type 457 1787 -631 2227 114 0 0 chr2 240520563 240520852 -12735731 + AluSx SINE Alu 9 297 -15 12867 120 26 13 chr2 240520852 240521492 -12735091 + Tigger1 DNA MER2_type 1787 2417 -1 2914 174 21 28 chr2 240521791 240522730 -12733853 - L1M2 LINE L1 -519 5793 4851 * 3730 177 61 1 chr2 240522719 240523475 -12733108 + L1M2 LINE L1 4079 4879 -1267 363 289 26 19 chr2 240523508 240523664 -12732919 - L1ME1 LINE L1 0 6166 6010 559 254 16 0 chr2 240523698 240523824 -12732759 - FLAM_A SINE Alu -4 138 11 1891 229 34 28 chr2 240523853 240524352 -12732231 - L1ME1 LINE L1 -198 5968 5467 1782 209 92 20 chr2 240524323 240524821 -12731762 - L1ME1 LINE L1 -956 5190 4657 * 518 277 44 81 chr2 240524827 240525098 -12731485 - MLT1J LTR MaLR -158 353 93 308 314 153 22 chr2 240525472 240525746 -12730837 - L1ME1 LINE L1 -3697 2449 2140 26 74 0 0 chr2 240525996 240526050 -12730533 + AT_rich Low_complexity Low_complexity 1 54 0 472 351 63 20 chr2 240526098 240526397 -12730186 - HAL1 LINE L1 -755 1752 1441 307 219 56 133 chr2 240526406 240526528 -12730055 - L1MC4 LINE L1 0 8042 7945 1914 144 55 50 chr2 240526528 240526890 -12729693 - THE1B LTR MaLR 0 364 1 307 219 56 133 chr2 240526890 240527000 -12729583 - L1MC4 LINE L1 -97 7945 7828 1537 252 53 23 chr2 240527006 240527534 -12729049 - L1ME2 LINE L1 -10 6154 5611 394 265 32 76 chr2 240527536 240527721 -12728862 - LTR40b LTR ERVL -161 301 125 372 267 218 6 chr2 240527801 240527966 -12728617 - LTR40a LTR ERVL -319 200 1 418 226 75 0 chr2 240527977 240528070 -12728513 - HERVL68 LTR ERVL -23 5507 5408 547 145 0 145 chr2 240528100 240528231 -12728352 + FLAM_C SINE Alu 6 117 -26 441 0 0 0 chr2 240528233 240528282 -12728301 + (CA)n Simple_repeat Simple_repeat 2 50 0 339 294 25 8 chr2 240528389 240528508 -12728075 - HERVL68 LTR ERVL -328 2709 2589 255 222 32 0 chr2 240528725 240528788 -12727795 - HERVL68 LTR ERVL -598 2439 2375 663 321 18 9 chr2 240528877 240529098 -12727485 - HERVL40 LTR ERVL -870 4660 4438 701 209 131 57 chr2 240529136 240529380 -12727203 - HERVL40 LTR ERVL -1288 4242 3981 416 287 49 0 chr2 240529380 240529502 -12727081 - HERVL40 LTR ERVL -1650 3880 3753 235 310 8 8 chr2 240530446 240530575 -12726008 + (TA)n Simple_repeat Simple_repeat 1 129 0 2054 153 3 0 chr2 240531152 240531460 -12725123 + AluSx SINE Alu 1 309 -3 535 252 9 0 chr2 240532761 240532872 -12723711 - MER81 DNA DNA -2 112 1 233 280 27 0 chr2 240535577 240535652 -12720931 + MIR3 SINE MIR 82 158 -50 264 398 15 10 chr2 240536917 240537113 -12719470 + MIR SINE MIR 16 212 -50 3707 197 33 18 chr2 240537232 240538010 -12718573 - L1MB7 LINE L1 -9 6175 5386 1414 124 77 5 chr2 240541512 240541721 -12714862 - AluSq SINE Alu -19 294 71 1669 195 7 13 chr2 240541817 240542119 -12714464 + AluJb SINE Alu 1 300 -12 804 209 144 56 chr2 240542831 240543171 -12713412 - MER93b LTR ERV1 0 373 4 2425 84 0 3 chr2 240544049 240544345 -12712238 + AluY SINE Alu 1 295 -16 362 321 24 24 chr2 240544676 240544841 -12711742 + MIR3 SINE MIR 38 202 -6 2278 114 42 0 chr2 240545304 240545663 -12710920 + L1PBa LINE L1 3 376 -6487 1468 207 101 0 chr2 240545663 240545991 -12710592 - LTR53 LTR ERVL -157 362 2 888 193 10 0 chr2 240549396 240549588 -12706995 + L1MA7 LINE L1 6088 6281 -10 498 211 101 124 chr2 240549884 240550110 -12706473 + LTR48 LTR ERV1 163 382 -405 2123 102 3 14 chr2 240550110 240550403 -12706180 - AluSg SINE Alu -20 290 1 498 211 101 124 chr2 240550403 240550474 -12706109 + LTR48 LTR ERV1 382 453 -334 493 189 106 50 chr2 240550535 240550715 -12705868 + MER34 LTR ERV1 353 542 0 259 240 284 5 chr2 240550764 240550968 -12705615 + LTR16A1 LTR ERVL 59 319 -138 2484 331 86 47 chr2 240551160 240552744 -12703839 + HERV16 LTR ERVL 1266 2986 -2010 579 268 75 14 chr2 240553031 240553244 -12703339 + MIR SINE MIR 2 227 -35 3706 97 14 0 chr2 240553342 240553856 -12702727 + L1PA10 LINE L1 5643 6163 -5 1466 138 62 24 chr2 240553872 240554161 -12702422 + L1MB8 LINE L1 5879 6178 0 31 58 0 0 chr2 240557816 240557868 -12698715 + GC_rich Low_complexity Low_complexity 1 52 0 2896 108 60 53 chr2 240559148 240559855 -12696728 - MER51A LTR ERV1 0 634 1 229 204 0 19 chr2 240560647 240560701 -12695882 + GA-rich Low_complexity Low_complexity 2 54 0 521 287 102 38 chr2 240563098 240563706 -12692877 - L1MC4a LINE L1 -712 5452 5262 24 32 0 0 chr2 240563954 240563985 -12692598 + AT_rich Low_complexity Low_complexity 1 31 0 520 306 167 9 chr2 240564546 240565006 -12691577 - L1MC4a LINE L1 -1230 4916 4384 2720 186 101 26 chr2 240565010 240565691 -12690892 + MER44D DNA MER2_type 2 605 0 602 268 86 79 chr2 240565969 240566541 -12690042 - L1MC4a LINE L1 -1722 4424 3849 1944 239 106 76 chr2 240566563 240567347 -12689236 - HAL1 LINE L1 -2 2505 1747 195 42 0 0 chr2 240567347 240567371 -12689212 + (TA)n Simple_repeat Simple_repeat 2 25 0 1944 239 106 76 chr2 240567371 240568277 -12688306 - HAL1 LINE L1 -760 1747 762 252 278 76 73 chr2 240568308 240568610 -12687973 - HAL1 LINE L1 -2197 310 8 377 334 5 15 chr2 240568615 240568845 -12687738 - L1MC4a LINE L1 -2293 3853 3625 1019 311 61 63 chr2 240569066 240569825 -12686758 - L1MC4a LINE L1 -2707 3439 2683 377 262 40 40 chr2 240570007 240570156 -12686427 - MER41E LTR ERV1 -50 462 314 2316 93 0 7 chr2 240570233 240570534 -12686049 + AluSx SINE Alu 1 299 -13 1860 163 51 0 chr2 240570865 240571220 -12685363 - L1MA9 LINE L1 -11 6301 5929 6261 234 61 34 chr2 240571243 240573016 -12683567 - L1 LINE L1 -2125 4225 2500 2204 106 10 0 chr2 240573016 240573309 -12683274 - AluSx SINE Alu -16 296 1 6261 234 61 34 chr2 240573309 240573756 -12682827 - L1 LINE L1 -3850 2500 2066 1741 118 138 82 chr2 240573756 240573797 -12682786 - MSTA LTR MaLR 0 428 391 2154 111 29 19 chr2 240573797 240574104 -12682479 + AluSx SINE Alu 1 310 -2 1741 118 138 82 chr2 240574104 240574295 -12682288 - MSTA LTR MaLR -37 391 212 2544 54 0 0 chr2 240574295 240574590 -12681993 - AluY SINE Alu -16 295 1 1741 118 138 82 chr2 240574590 240574761 -12681822 - MSTA LTR MaLR -216 212 1 6261 234 61 34 chr2 240574761 240576137 -12680446 - L1 LINE L1 -4284 2066 874 273 335 12 12 chr2 240576634 240576801 -12679782 - L1 LINE L1 -5516 765 599 1938 264 16 28 chr2 240576850 240577463 -12679120 - L1 LINE L1 -5671 610 5 359 288 141 6 chr2 240577468 240577638 -12678945 - HAL1 LINE L1 -1155 1352 1160 3691 211 55 11 chr2 240577717 240578819 -12677764 - L1MB8 LINE L1 0 6178 4977 766 206 113 0 chr2 240578819 240578979 -12677604 - MER45A DNA AcHobo 0 178 1 3691 211 55 11 chr2 240578979 240579585 -12676998 - L1MB8 LINE L1 -1201 4977 4399 21 36 0 0 chr2 240579984 240580012 -12676571 + AT_rich Low_complexity Low_complexity 1 28 0 1118 262 64 77 chr2 240580252 240580820 -12675763 - L2 LINE L2 -3 3310 2735 385 300 122 31 chr2 240580851 240581198 -12675385 - L1ME LINE L1 -499 5665 5281 1627 142 15 0 chr2 240581403 240581664 -12674919 - L1PA11 LINE L1 -4 6170 5906 1409 58 0 5 chr2 240581664 240581855 -12674728 + L1PA11 LINE L1 5705 5894 -269 402 293 144 35 chr2 240581971 240582166 -12674417 - L1ME LINE L1 -1637 4509 4337 2225 134 16 13 chr2 240582166 240582538 -12674045 + THE1C LTR MaLR 3 375 0 402 293 144 35 chr2 240582538 240582690 -12673893 - L1ME LINE L1 -1809 4337 4124 411 313 0 0 chr2 240582692 240582871 -12673712 + (TA)n Simple_repeat Simple_repeat 1 179 0 2030 101 43 0 chr2 240583386 240583704 -12672879 - AluSg SINE Alu 0 310 1 5450 86 20 62 chr2 240584132 240584497 -12672086 - L1PB1 LINE L1 -3 6148 5770 351 0 0 0 chr2 240584497 240584536 -12672047 + (CA)n Simple_repeat Simple_repeat 2 40 0 5450 86 20 62 chr2 240584536 240585097 -12671486 - L1PB1 LINE L1 -381 5770 5260 1817 172 75 77 chr2 240585098 240585399 -12671184 - L1PB1 LINE L1 -1446 4700 4399 234 0 0 0 chr2 240585399 240585425 -12671158 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1817 172 75 77 chr2 240585425 240585711 -12670872 - L1PB1 LINE L1 -1747 4399 4114 198 103 0 0 chr2 240585849 240585878 -12670705 + (GGAA)n Simple_repeat Simple_repeat 3 31 0 1432 238 82 39 chr2 240585898 240587574 -12669009 + L1ME2 LINE L1 4020 6006 -158 315 218 120 105 chr2 240587741 240587874 -12668709 - HAL1 LINE L1 -2310 197 63 322 330 18 18 chr2 240590241 240590350 -12666233 - L2 LINE L2 -9 3263 3155 22 0 0 0 chr2 240591446 240591468 -12665115 + AT_rich Low_complexity Low_complexity 1 22 0 1748 186 7 0 chr2 240591950 240592257 -12664326 - AluJo SINE Alu -3 309 1 2125 250 72 10 chr2 240593144 240593815 -12662768 - MER21B LTR ERV1 -54 809 98 254 244 37 12 chr2 240593875 240593957 -12662626 - MER21B LTR ERV1 -778 85 2 364 321 113 24 chr2 240594209 240594377 -12662206 - MIR SINE MIR -74 188 6 207 0 0 0 chr2 240596160 240596183 -12660400 + (TTGG)n Simple_repeat Simple_repeat 1 23 0 2895 158 35 27 chr2 240596204 240596824 -12659759 - L1MA8 LINE L1 -3 7248 6624 480 184 0 0 chr2 240596883 240596970 -12659613 + Tigger5 DNA MER2_type 2237 2323 0 14191 196 42 32 chr2 240596970 240598029 -12658554 - L1MA8 LINE L1 -642 6630 5582 2124 125 10 3 chr2 240598029 240598324 -12658259 - AluSq SINE Alu -16 297 1 14191 196 42 32 chr2 240598324 240598853 -12657730 - L1MA8 LINE L1 -1690 5582 5059 2569 98 30 11 chr2 240598853 240599221 -12657362 - THE1C LTR MaLR 0 375 1 14191 196 42 32 chr2 240599221 240600909 -12655674 - L1MA8 LINE L1 -2213 5059 3388 1637 193 43 13 chr2 240600909 240601210 -12655373 - AluJo SINE Alu 0 312 3 14191 196 42 32 chr2 240601210 240603675 -12652908 - L1MA8 LINE L1 -3884 3388 7 2068 191 33 7 chr2 240603935 240604355 -12652228 - Tigger2a DNA MER2_type -3 431 1 261 309 87 13 chr2 240605267 240605416 -12651167 + L2 LINE L2 2174 2333 -981 360 131 0 72 chr2 240605427 240605505 -12651078 - MLT1H1 LTR MaLR 0 549 478 495 333 98 27 chr2 240605513 240605919 -12650664 + L2 LINE L2 2514 2948 -366 657 260 128 7 chr2 240605920 240606201 -12650382 + L1ME3A LINE L1 5567 5881 -289 308 279 34 41 chr2 240606296 240606443 -12650140 + L1ME3A LINE L1 5911 6056 -114 2958 3 0 0 chr2 240606453 240606771 -12649812 - AluYb8 SINE Alu 0 318 1 27 0 0 0 chr2 240606852 240606879 -12649704 + AT_rich Low_complexity Low_complexity 1 27 0 1999 170 0 0 chr2 240607515 240607826 -12648757 + AluJb SINE Alu 1 311 -1 226 214 107 84 chr2 240610504 240610635 -12645948 - MIR SINE MIR -12 250 117 1747 163 6 56 chr2 240610659 240610804 -12645779 + AluJb SINE Alu 1 152 -160 2143 127 0 0 chr2 240610804 240611095 -12645488 + AluSg SINE Alu 1 291 -19 1747 163 6 56 chr2 240611095 240611269 -12645314 + AluJb SINE Alu 152 304 -8 2401 104 0 0 chr2 240611269 240611606 -12644977 + L1PA14 LINE L1 5823 6159 -2 2240 126 0 0 chr2 240611751 240612052 -12644531 + AluSx SINE Alu 1 301 -11 283 307 59 0 chr2 240612497 240612598 -12643985 - MLT1J1 LTR MaLR -103 343 237 2246 110 72 17 chr2 240613281 240613626 -12642957 - THE1B LTR MaLR 0 364 1 357 145 13 79 chr2 240613916 240613992 -12642591 - MIR SINE MIR -78 184 114 668 281 29 50 chr2 240614075 240614374 -12642209 - MER46C DNA MER2_type -4 334 41 1989 138 0 41 chr2 240614374 240614693 -12641890 + AluJb SINE Alu 1 306 -6 668 281 29 50 chr2 240614693 240614734 -12641849 - MER46C DNA MER2_type -297 41 1 21 0 0 0 chr2 240615028 240615049 -12641534 + AT_rich Low_complexity Low_complexity 1 21 0 505 267 50 11 chr2 240615099 240615279 -12641304 - MLT1J1 LTR MaLR -22 424 238 219 313 30 20 chr2 240616455 240616554 -12640029 - MIR SINE MIR -60 202 103 290 327 18 0 chr2 240616746 240616856 -12639727 + (TA)n Simple_repeat Simple_repeat 1 112 0 182 37 37 0 chr2 240617480 240617507 -12639076 + (CA)n Simple_repeat Simple_repeat 1 28 0 2382 95 0 0 chr2 240617998 240618304 -12638279 + AluY SINE Alu 1 306 -5 420 224 20 118 chr2 240618701 240618946 -12637637 + L2 LINE L2 2185 2405 -909 208 325 8 67 chr2 240619953 240620073 -12636510 - MIR SINE MIR -73 189 77 5880 175 7 5 chr2 240620374 240622283 -12634300 - L1PA16 LINE L1 -1 6165 4255 580 312 31 61 chr2 240622631 240622705 -12633878 - L1M4 LINE L1 -757 5389 5314 2261 110 7 0 chr2 240622705 240623014 -12633569 - AluY SINE Alu 0 311 1 580 312 31 61 chr2 240623014 240623384 -12633199 - L1M4 LINE L1 -832 5314 4958 1081 177 0 0 chr2 240623633 240623808 -12632775 + AluSg/x SINE Alu 132 306 -6 2239 121 0 0 chr2 240624673 240624970 -12631613 - AluSx SINE Alu -15 297 1 739 268 67 73 chr2 240625789 240626117 -12630466 + L2 LINE L2 2986 3311 -2 363 145 0 0 chr2 240626838 240626907 -12629676 + (TGG)n Simple_repeat Simple_repeat 1 69 0 1726 312 105 9 chr2 240626907 240627808 -12628775 + L2 LINE L2 2084 3064 -249 762 11 0 22 chr2 240627808 240627899 -12628684 - L1PA2 LINE L1 -4 6151 6063 322 277 97 13 chr2 240627936 240628091 -12628492 - L1M4 LINE L1 -937 5209 5042 425 295 107 21 chr2 240628128 240628362 -12628221 + LTR16C LTR ERVL 220 473 -18 848 247 75 27 chr2 240628551 240628883 -12627700 - L1M4 LINE L1 -1301 4845 4498 1012 272 161 9 chr2 240628903 240629567 -12627016 - L2 LINE L2 0 3313 2535 3492 190 30 11 chr2 240629604 240630241 -12626342 + MER82 DNA MER2_type 1 649 -4 302 323 56 53 chr2 240630247 240630678 -12625905 - L1M4 LINE L1 -1505 4641 4210 1364 182 78 7 chr2 240630790 240630942 -12625641 - AluJo SINE Alu -24 288 148 323 0 0 45 chr2 240630942 240630986 -12625597 + (TTTTA)n Simple_repeat Simple_repeat 1 42 0 1364 182 78 7 chr2 240630986 240631102 -12625481 - AluJo SINE Alu -164 148 1 301 272 48 32 chr2 240631115 240631240 -12625343 - L1M4 LINE L1 -3145 3001 2875 362 330 61 9 chr2 240631430 240631660 -12624923 - L1M4 LINE L1 -3761 2385 2144 976 155 39 45 chr2 240631862 240632073 -12624510 - THE1C LTR MaLR 0 375 181 25547 109 16 9 chr2 240632081 240634250 -12622333 - L1PA8A LINE L1 -27 6419 4266 2266 107 3 0 chr2 240634250 240634560 -12622023 - AluY SINE Alu 0 311 1 25547 109 16 9 chr2 240634560 240637015 -12619568 - L1PA8A LINE L1 -2180 4266 1771 3106 113 9 17 chr2 240637004 240637471 -12619112 - L1PA8A LINE L1 -4923 952 490 * 875 128 174 12 chr2 240637471 240637643 -12618940 - THE1C LTR MaLR -226 202 3 446 237 43 29 chr2 240637643 240637752 -12618831 + MLT1J LTR MaLR 102 212 -299 1669 179 14 4 chr2 240638174 240638453 -12618130 - AluJo SINE Alu -30 282 1 588 269 59 23 chr2 240638698 240638917 -12617666 - HAL1b LINE L1 -854 494 268 2111 137 3 0 chr2 240639058 240639364 -12617219 - AluSx SINE Alu -5 307 1 1651 174 50 7 chr2 240639607 240639905 -12616678 - AluSx SINE Alu -1 311 1 238 206 32 32 chr2 240640427 240640490 -12616093 - MLT1J1 LTR MaLR 0 446 384 536 245 97 7 chr2 240640667 240640822 -12615761 - MLT1J LTR MaLR -332 179 11 2204 103 10 3 chr2 240641165 240641456 -12615127 - AluSx SINE Alu -7 305 13 217 303 0 30 chr2 240641549 240641648 -12614935 + CT-rich Low_complexity Low_complexity 4 99 0 222 247 10 21 chr2 240641774 240641871 -12614712 + (TA)n Simple_repeat Simple_repeat 2 97 0 529 83 0 83 chr2 240642368 240642452 -12614131 - MADE1 DNA Mariner -1 79 3 576 200 52 58 chr2 240643969 240644124 -12612459 + MLT1G LTR MaLR 10 163 -427 497 230 221 19 chr2 240644138 240644351 -12612232 + MLT1G1 LTR MaLR 287 595 0 2037 126 0 11 chr2 240645047 240645366 -12611217 - AluSx SINE Alu 0 316 1 284 172 0 16 chr2 240645578 240645642 -12610941 + CT-rich Low_complexity Low_complexity 2 64 0 2246 104 7 3 chr2 240645952 240646241 -12610342 + AluSx SINE Alu 1 290 -22 778 134 22 0 chr2 240646790 240646924 -12609659 + L1 LINE L1 4185 4321 -1825 1294 312 44 44 chr2 240646942 240647554 -12609029 + L1PA13 LINE L1 788 1399 -6175 466 284 18 5 chr2 240647557 240647752 -12608831 + L1PA13 LINE L1 2086 2298 -5276 6243 212 74 71 chr2 240648349 240649786 -12606797 + L1PA13 LINE L1 2218 3648 -3936 2382 106 0 0 chr2 240649786 240650098 -12606485 + AluSq SINE Alu 1 312 -1 6243 212 74 71 chr2 240650098 240650643 -12605940 + L1PA13 LINE L1 3648 4189 -3395 2102 132 0 0 chr2 240650643 240650956 -12605627 + AluSg SINE Alu 1 313 0 6243 212 74 71 chr2 240650956 240651543 -12605040 + L1PA13 LINE L1 4189 4772 -2812 883 126 7 0 chr2 240651543 240651678 -12604905 + AluJb SINE Alu 154 289 -23 6243 212 74 71 chr2 240651678 240653003 -12603580 + L1PA13 LINE L1 4772 6230 -1354 2123 124 0 0 chr2 240653003 240653312 -12603271 + AluSx SINE Alu 1 309 0 6243 212 74 71 chr2 240653312 240653773 -12602810 + L1PA13 LINE L1 6230 6688 -896 24 53 0 0 chr2 240653787 240653825 -12602758 + AT_rich Low_complexity Low_complexity 1 38 0 3443 208 31 48 chr2 240653870 240654230 -12602353 + L1MB4 LINE L1 5258 5623 -557 1973 115 59 3 chr2 240654230 240654517 -12602066 + AluSg SINE Alu 1 303 -7 3443 208 31 48 chr2 240654517 240655093 -12601490 + L1MB4 LINE L1 5623 6178 -2 1071 107 0 0 chr2 240655527 240655676 -12600907 - AluSg/x SINE Alu -11 299 151 474 278 8 23 chr2 240656231 240656364 -12600219 + MER34 LTR ERV1 1 131 -411 1093 161 31 0 chr2 240656389 240656581 -12600002 + L1M2 LINE L1 5411 5608 -704 31790 99 13 26 chr2 240656593 240661091 -12595492 + L1PA7 LINE L1 1 4465 -2004 2430 71 3 10 chr2 240661091 240661399 -12595184 + AluSp SINE Alu 1 306 -7 31790 99 13 26 chr2 240661399 240663378 -12593205 + L1PA7 LINE L1 4465 6469 0 513 229 93 38 chr2 240663387 240663672 -12592911 + LTR48 LTR ERV1 228 727 -60 594 200 0 70 chr2 240663681 240663796 -12592787 - AluJb SINE Alu -192 120 14 240 35 0 0 chr2 240663803 240663832 -12592751 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1707 155 25 14 chr2 240663835 240664119 -12592464 - AluJb SINE Alu -25 287 1 1864 151 7 10 chr2 240664121 240664419 -12592164 - AluJo SINE Alu -15 297 1 2434 100 0 0 chr2 240665992 240666301 -12590282 + AluSx SINE Alu 1 309 -3 1700 183 0 16 chr2 240666332 240666638 -12589945 + AluJo SINE Alu 3 303 -9 1121 259 20 20 chr2 240667053 240667397 -12589186 + L1ME LINE L1 3503 3846 -2300 682 160 0 0 chr2 240667405 240667505 -12589078 + U6 snRNA snRNA 2 101 -6 2396 81 14 3 chr2 240667521 240667818 -12588765 + AluSg SINE Alu 1 300 -10 2648 231 72 36 chr2 240667818 240669536 -12587047 + L1ME LINE L1 3844 5652 -518 6579 54 40 1 chr2 240669703 240670500 -12586083 + L1PA6 LINE L1 5327 6154 0 18694 109 44 39 chr2 240670527 240671716 -12584867 + LOR1a-int LTR ERV1 2229 3410 -2536 2331 103 0 0 chr2 240671716 240672027 -12584556 - AluSx SINE Alu -1 311 1 18694 109 44 39 chr2 240672027 240673075 -12583508 + LOR1a-int LTR ERV1 3410 4451 -1495 2336 79 3 0 chr2 240673075 240673365 -12583218 + AluY SINE Alu 4 294 -17 18694 109 44 39 chr2 240673365 240673861 -12582722 + LOR1a-int LTR ERV1 4451 4943 -1003 2332 82 0 3 chr2 240673861 240674154 -12582429 + AluSg SINE Alu 1 292 -18 18694 109 44 39 chr2 240674154 240674573 -12582010 + LOR1a-int LTR ERV1 4943 4824 -1122 2345 107 3 0 chr2 240674573 240674882 -12581701 + AluSx SINE Alu 2 311 -1 18694 109 44 39 chr2 240674882 240674954 -12581629 + LOR1a-int LTR ERV1 4823 4893 -1053 1862 109 33 7 chr2 240674935 240675211 -12581372 + LOR1a-int LTR ERV1 5782 6064 -2056 * 617 111 11 0 chr2 240675210 240675300 -12581283 + LOR1a-int LTR ERV1 8030 8120 0 * 3327 139 20 2 chr2 240675300 240675788 -12580795 + LOR1a LTR ERV1 1 497 0 1838 174 0 3 chr2 240675922 240676215 -12580368 + AluJb SINE Alu 1 292 -20 468 195 128 67 chr2 240676604 240676768 -12579815 - MER5B DNA MER1_type -4 174 1 681 220 33 0 chr2 240676807 240676957 -12579626 - MER5A DNA MER1_type -18 171 17 727 214 42 18 chr2 240676973 240677141 -12579442 + MER5B DNA MER1_type 6 177 -1 475 331 12 0 chr2 240678709 240678869 -12577714 - ERVL LTR ERVL -1134 4630 4469 285 284 27 0 chr2 240679227 240679301 -12577282 - LTR33 LTR ERVL -444 77 2 1455 223 17 31 chr2 240680424 240680783 -12575800 - MLT1A1 LTR MaLR -11 354 1 7959 174 39 14 chr2 240682036 240683439 -12573144 + L1PA14 LINE L1 3919 5389 -772 2157 98 25 0 chr2 240683439 240683724 -12572859 - AluSp SINE Alu -19 294 3 7959 174 39 14 chr2 240683724 240684500 -12572083 + L1PA14 LINE L1 5389 6144 -17 27 0 0 0 chr2 240684527 240684554 -12572029 + AT_rich Low_complexity Low_complexity 1 27 0 320 294 24 16 chr2 240684795 240684921 -12571662 - ERVL LTR ERVL -745 5019 4893 2442 77 0 0 chr2 240684927 240685225 -12571358 - AluY SINE Alu -13 298 1 597 161 29 66 chr2 240685285 240685422 -12571161 - MER34C LTR ERV1 0 585 454 255 204 0 0 chr2 240685438 240685492 -12571091 + (TATATG)n Simple_repeat Simple_repeat 1 54 0 370 169 0 15 chr2 240685492 240685557 -12571026 - MER34C LTR ERV1 -111 474 411 661 319 67 31 chr2 240685593 240686190 -12570393 + ERVL LTR ERVL 2018 2664 -3100 374 244 49 32 chr2 240686332 240686455 -12570128 + ERVL LTR ERVL 1612 1736 -4028 1297 213 25 47 chr2 240686464 240686901 -12569682 - MER49 LTR ERV1 -168 755 141 1784 157 109 66 chr2 240686935 240687158 -12569425 + MER4A LTR ERV1 1 213 -252 2030 110 17 17 chr2 240687158 240687449 -12569134 + AluSx SINE Alu 1 291 -21 1784 157 109 66 chr2 240687449 240687792 -12568791 + MER4A LTR ERV1 213 445 -20 1205 177 0 31 chr2 240688083 240688309 -12568274 + AluJb SINE Alu 85 303 -9 585 274 16 21 chr2 240688728 240688918 -12567665 + MLT1J1 LTR MaLR 238 426 -20 546 269 0 28 chr2 240689140 240689285 -12567298 + MLT1J1 LTR MaLR 8 148 -298 282 250 0 0 chr2 240689318 240689378 -12567205 + MLT1J1 LTR MaLR 237 296 -150 298 274 30 85 chr2 240689381 240689437 -12567146 + MLT1J2 LTR MaLR 293 351 -99 1906 170 0 0 chr2 240689437 240689731 -12566852 - AluJb SINE Alu -18 294 1 298 274 30 85 chr2 240689731 240689838 -12566745 + MLT1J2 LTR MaLR 351 447 -3 1713 155 7 38 chr2 240690314 240690446 -12566137 + AluJb SINE Alu 2 137 -278 2389 81 0 0 chr2 240690446 240690742 -12565841 + AluY SINE Alu 1 296 -15 1713 155 7 38 chr2 240690742 240691032 -12565551 + AluJb SINE Alu 137 415 0 1973 164 0 13 chr2 240691237 240691548 -12565035 - AluJo SINE Alu -3 309 3 10500 128 25 17 chr2 240691715 240693343 -12563240 + L1PA10 LINE L1 3760 5372 -796 1974 98 0 64 chr2 240693343 240693638 -12562945 + AluY SINE Alu 3 278 -33 216 0 0 0 chr2 240693638 240693662 -12562921 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 10500 128 25 17 chr2 240693662 240694422 -12562161 + L1PA10 LINE L1 5371 6165 -3 295 318 62 68 chr2 240695018 240695210 -12561373 + MLT1J1 LTR MaLR 247 437 -9 822 128 90 15 chr2 240695263 240695421 -12561162 + FRAM SINE Alu 11 176 0 1180 243 46 68 chr2 240696747 240697203 -12559380 + MLT1J1 LTR MaLR 1 446 0 655 206 53 73 chr2 240697492 240697687 -12558896 + L1ME3A LINE L1 2393 2620 -4014 2181 114 0 10 chr2 240697687 240697986 -12558597 + AluSg SINE Alu 3 298 -12 655 206 53 73 chr2 240697986 240698095 -12558488 + L1ME3A LINE L1 2620 2730 -3904 1631 199 69 82 chr2 240698141 240698665 -12557918 + MER34 LTR ERV1 10 526 -16 5351 261 70 45 chr2 240698684 240700122 -12556461 + L1ME3A LINE L1 2747 4147 -2411 2112 147 0 0 chr2 240700122 240700421 -12556162 + AluSx SINE Alu 1 299 -13 5351 261 70 45 chr2 240700421 240700508 -12556075 + L1ME3A LINE L1 4147 4230 -2328 1965 142 0 17 chr2 240700508 240700804 -12555779 + AluJb SINE Alu 5 295 -17 5351 261 70 45 chr2 240700804 240700901 -12555682 + L1ME3A LINE L1 4230 4323 -2235 1998 106 28 14 chr2 240700901 240701184 -12555399 + AluSg SINE Alu 1 287 -23 5351 261 70 45 chr2 240701184 240702241 -12554342 + L1ME3A LINE L1 4323 5528 -1030 2111 131 3 0 chr2 240702241 240702538 -12554045 - AluSx SINE Alu -14 298 1 5351 261 70 45 chr2 240702538 240703223 -12553360 + L1ME3A LINE L1 5528 6194 -364 392 225 11 11 chr2 240703210 240703299 -12553284 - L1ME3A LINE L1 -243 6317 6229 * 520 194 87 53 chr2 240703303 240703509 -12553074 + L1ME3A LINE L1 6346 6558 -6 35 0 0 0 chr2 240703530 240703565 -12553018 + AT_rich Low_complexity Low_complexity 1 35 0 2107 173 19 8 chr2 240703758 240704133 -12552450 + MSTD LTR MaLR 1 379 -17 198 0 0 0 chr2 240704137 240704159 -12552424 + (A)n Simple_repeat Simple_repeat 1 22 0 277 242 16 0 chr2 240704709 240704771 -12551812 + MLT1J1 LTR MaLR 261 323 -123 207 264 0 136 chr2 240705210 240705320 -12551263 + MIR SINE MIR 52 146 -62 598 157 49 0 chr2 240705445 240705547 -12551036 + LTR65 LTR ERV1 5 111 -558 2357 89 0 19 chr2 240705550 240705864 -12550719 + AluSg SINE Alu 1 308 -2 234 0 0 0 chr2 240705935 240705961 -12550622 + (A)n Simple_repeat Simple_repeat 1 26 0 303 235 15 0 chr2 240706009 240706077 -12550506 + LTR65 LTR ERV1 129 197 -472 1355 209 14 7 chr2 240706346 240706624 -12549959 + AluJo SINE Alu 3 282 -30 2242 115 0 0 chr2 240706857 240707153 -12549430 + AluSq SINE Alu 1 296 -17 292 315 0 55 chr2 240707297 240707424 -12549159 + MIR SINE MIR 65 184 -78 2468 67 0 3 chr2 240707578 240707878 -12548705 - AluY SINE Alu -12 299 1 527 276 97 51 chr2 240708160 240708417 -12548166 - MER21B LTR ERV1 -148 715 447 726 176 0 70 chr2 240708627 240708769 -12547814 - AluSx SINE Alu -125 187 56 1029 251 9 33 chr2 240708947 240709300 -12547283 - MER21B LTR ERV1 -437 426 13 2187 155 126 8 chr2 240709333 240709714 -12546869 - MSTA LTR MaLR 0 428 3 6581 155 14 20 chr2 240709716 240710820 -12545763 - MSTA-int LTR MaLR 0 1580 483 22 0 0 0 chr2 240711143 240711165 -12545418 + AT_rich Low_complexity Low_complexity 1 22 0 3491 138 2 0 chr2 240712900 240713438 -12543145 - MSTA-int LTR MaLR -1112 539 1 2362 138 122 8 chr2 240713438 240713822 -12542761 - MSTA LTR MaLR 0 428 1 203 228 43 33 chr2 240714412 240714504 -12542079 + CT-rich Low_complexity Low_complexity 3 95 0 2347 86 0 0 chr2 240715280 240715570 -12541013 + AluY SINE Alu 1 290 -21 31 0 0 0 chr2 240715570 240715601 -12540982 + AT_rich Low_complexity Low_complexity 1 31 0 1935 141 6 26 chr2 240715682 240715995 -12540588 + AluSx SINE Alu 1 307 -5 199 115 58 96 chr2 240716133 240716185 -12540398 - L2 LINE L2 -33 3280 3231 2288 100 3 0 chr2 240716775 240717075 -12539508 - AluSp SINE Alu -11 302 2 200 182 0 0 chr2 240717142 240717175 -12539408 + GA-rich Low_complexity Low_complexity 1 33 0 1884 153 7 0 chr2 240719910 240720197 -12536386 + AluJo SINE Alu 1 289 -23 1408 55 0 0 chr2 240720207 240720512 -12536071 + AluY SINE Alu 1 305 0 267 103 0 0 chr2 240720511 240720550 -12536033 + (CATA)n Simple_repeat Simple_repeat 2 40 0 198 0 0 0 chr2 240720549 240720571 -12536012 + (GA)n Simple_repeat Simple_repeat 2 23 0 * 2123 128 0 19 chr2 240720607 240720919 -12535664 - AluSx SINE Alu -6 306 1 1617 203 25 9 chr2 240721362 240721688 -12534895 + L1MB5 LINE L1 5717 6047 -127 655 206 53 73 chr2 240721839 240722034 -12534549 + L1MDa LINE L1 2393 2620 -4014 2181 114 0 10 chr2 240722034 240722333 -12534250 + AluSg SINE Alu 3 298 -12 655 206 53 73 chr2 240722333 240722442 -12534141 + L1MDa LINE L1 2620 2730 -3904 1651 202 65 78 chr2 240722488 240723012 -12533571 + MER34 LTR ERV1 10 526 -16 2974 268 70 30 chr2 240723031 240724469 -12532114 + L1MDa LINE L1 2747 4251 -2289 2057 154 0 0 chr2 240724469 240724768 -12531815 + AluSx SINE Alu 1 299 -13 2974 268 70 30 chr2 240724768 240724855 -12531728 + L1MDa LINE L1 4251 4333 -2207 1972 134 10 3 chr2 240724855 240725145 -12531438 + AluSq SINE Alu 5 296 -17 292 315 0 55 chr2 240725289 240725416 -12531167 + MIR SINE MIR 65 184 -78 2479 63 0 3 chr2 240725570 240725870 -12530713 - AluY SINE Alu -12 299 1 207 264 0 136 chr2 240726435 240726545 -12530038 + MIR SINE MIR 52 146 -62 598 157 49 0 chr2 240726670 240726772 -12529811 + LTR65 LTR ERV1 5 111 -558 2027 94 6 38 chr2 240726775 240727093 -12529490 + AluSg SINE Alu 1 308 -2 303 235 15 0 chr2 240727228 240727296 -12529287 + LTR65 LTR ERV1 129 197 -472 1903 157 3 0 chr2 240727565 240727851 -12528732 + AluJo SINE Alu 3 289 -23 2187 56 0 4 chr2 240727861 240728127 -12528456 + AluY SINE Alu 1 265 -46 3044 265 17 14 chr2 240728277 240729244 -12527339 - L1M2 LINE L1 -4454 1897 940 2036 267 9 17 chr2 240729993 240730528 -12526055 - L1M2 LINE L1 -5746 535 5 255 286 169 13 chr2 240730538 240730769 -12525814 - L1MEd LINE L1 -4881 1238 972 607 195 0 0 chr2 240730782 240730895 -12525688 - L1MB8 LINE L1 0 6178 6066 1308 102 11 0 chr2 240730895 240731071 -12525512 + L1PB1 LINE L1 5970 6148 -3 1958 98 49 0 chr2 240731499 240731764 -12524819 + AluSg SINE Alu 1 278 -32 249 0 23 47 chr2 240731766 240731809 -12524774 + (CAAAA)n Simple_repeat Simple_repeat 3 44 0 2448 259 68 52 chr2 240731949 240732465 -12524118 - L1ME LINE L1 -545 5619 5113 2136 128 3 0 chr2 240732465 240732763 -12523820 + AluSx SINE Alu 1 299 -13 2448 259 68 52 chr2 240732763 240733815 -12522768 - L1ME LINE L1 -1051 5113 4027 2033 104 28 14 chr2 240733815 240734102 -12522481 - AluSg SINE Alu -19 291 1 2448 259 68 52 chr2 240734102 240734199 -12522384 - L1ME LINE L1 -2137 4027 3933 1709 148 0 19 chr2 240734199 240734469 -12522114 - AluJb SINE Alu -17 295 31 2035 100 33 7 chr2 240734469 240734769 -12521814 + LOR1-int LTR ERV1 647 954 -7166 909 153 0 0 chr2 240734769 240734900 -12521683 + AluJb SINE Alu 1 131 -181 7358 92 58 52 chr2 240734900 240735011 -12521572 + LOR1-int LTR ERV1 939 1048 -7072 2046 157 0 0 chr2 240735011 240735305 -12521278 + AluSq SINE Alu 1 294 -19 7358 92 58 52 chr2 240735305 240735436 -12521147 + LOR1-int LTR ERV1 1048 1177 -6943 2076 119 0 68 chr2 240735436 240735772 -12520811 + AluSq SINE Alu 1 313 0 7358 92 58 52 chr2 240735772 240736827 -12519756 + LOR1-int LTR ERV1 1177 2244 -5876 1576 213 54 3 chr2 240736829 240737217 -12519366 + L1P3 LINE L1 10 741 -5720 990 118 0 0 chr2 240737353 240737505 -12519078 + (TTTCC)n Simple_repeat Simple_repeat 5 156 0 255 203 0 0 chr2 240737505 240737564 -12519019 + CT-rich Low_complexity Low_complexity 4 62 0 529 83 0 83 chr2 240738370 240738454 -12518129 + MADE1 DNA Mariner 3 79 -1 231 247 10 21 chr2 240738951 240739048 -12517535 + (TA)n Simple_repeat Simple_repeat 2 97 0 189 74 0 0 chr2 240739310 240739337 -12517246 + (T)n Simple_repeat Simple_repeat 1 27 0 13571 139 12 27 chr2 240739380 240741711 -12514872 + L1P3 LINE L1 713 3008 -3453 3849 114 0 2 chr2 240742089 240742642 -12513941 - L1P LINE L1 -1644 4502 3951 2364 100 0 0 chr2 240742656 240742967 -12513616 - AluY SINE Alu 0 311 1 544 322 32 35 chr2 240742989 240743337 -12513246 - L1M4 LINE L1 -842 5304 4958 1143 165 0 0 chr2 240743586 240743762 -12512821 + AluSg/x SINE Alu 132 307 -5 3961 148 31 25 chr2 240743928 240744640 -12511943 + MSTA-int LTR MaLR 865 1580 0 2187 155 126 8 chr2 240744642 240745023 -12511560 + MSTA LTR MaLR 3 428 0 1029 251 9 33 chr2 240745056 240745409 -12511174 + MER21B LTR ERV1 13 426 -437 651 168 21 98 chr2 240745587 240745730 -12510853 + AluSx SINE Alu 56 187 -125 287 250 14 14 chr2 240745983 240746055 -12510528 + MER77 LTR ERV1 530 601 -4 251 318 183 0 chr2 240746242 240746368 -12510215 + MIR SINE MIR 106 254 -8 25 31 0 0 chr2 240746749 240746781 -12509802 + AT_rich Low_complexity Low_complexity 1 32 0 200 178 0 151 chr2 240747144 240747217 -12509366 + MIR3 SINE MIR 122 183 -25 195 100 0 0 chr2 240747680 240747710 -12508873 + (TC)n Simple_repeat Simple_repeat 2 31 0 * 479 187 6 0 chr2 240747709 240747880 -12508703 + (TA)n Simple_repeat Simple_repeat 1 172 0 183 184 0 0 chr2 240748270 240748308 -12508275 + GA-rich Low_complexity Low_complexity 4 41 0 979 129 6 6 chr2 240748308 240748478 -12508105 + (GGAGA)n Simple_repeat Simple_repeat 4 173 0 316 286 168 0 chr2 240748889 240749008 -12507575 + MIR SINE MIR 106 244 -18 25 31 0 0 chr2 240749396 240749428 -12507155 + AT_rich Low_complexity Low_complexity 1 32 0 200 178 0 151 chr2 240749791 240749864 -12506719 + MIR3 SINE MIR 122 183 -25 210 71 0 0 chr2 240750327 240750355 -12506228 + (TC)n Simple_repeat Simple_repeat 2 29 0 29 28 0 0 chr2 240750997 240751033 -12505550 + AT_rich Low_complexity Low_complexity 1 36 0 1791 136 10 33 chr2 240751818 240752119 -12504464 + AluSx SINE Alu 1 294 -18 1967 123 3 45 chr2 240752729 240753038 -12503545 - AluSx SINE Alu -16 296 1 609 247 20 7 chr2 240753310 240753460 -12503123 + MIR SINE MIR 101 252 -10 835 218 119 10 chr2 240753602 240753804 -12502779 + MER58A DNA MER1_type 1 224 0 1170 220 46 7 chr2 240754209 240754491 -12502092 - L1MA4 LINE L1 -8 6292 6000 1947 234 39 2 chr2 240755228 240755642 -12500941 - MER68 LTR ERV1 -4 558 130 628 141 96 119 chr2 240755871 240756048 -12500535 - MER68 LTR ERV1 -389 173 1 282 388 8 8 chr2 240756255 240756389 -12500194 + MIR3 SINE MIR 12 145 -63 387 0 0 0 chr2 240757635 240757678 -12498905 + (CA)n Simple_repeat Simple_repeat 2 44 0 1582 187 60 17 chr2 240757953 240758252 -12498331 + 7SLRNA srpRNA srpRNA 1 312 -8 2127 118 0 13 chr2 240759164 240759469 -12497114 - AluSx SINE Alu -10 302 2 543 31 0 0 chr2 240759770 240759835 -12496748 + (CA)n Simple_repeat Simple_repeat 1 65 0 2034 100 61 0 chr2 240761327 240761606 -12494977 - AluSc SINE Alu -11 298 3 2122 141 105 114 chr2 240762655 240762692 -12493891 - LTR44 LTR ERV1 0 519 483 1846 160 7 3 chr2 240762692 240762979 -12493604 - AluJb SINE Alu -24 288 1 2122 141 105 114 chr2 240762979 240763091 -12493492 - LTR44 LTR ERV1 -36 483 371 2296 117 3 0 chr2 240763091 240763400 -12493183 - AluSg SINE Alu 0 310 1 2122 141 105 114 chr2 240763400 240763422 -12493161 - LTR44 LTR ERV1 -148 371 350 3412 154 0 35 chr2 240763422 240763968 -12492615 - MER1A DNA MER1_type 0 527 1 2122 141 105 114 chr2 240763968 240764318 -12492265 - LTR44 LTR ERV1 -169 350 1 506 119 0 48 chr2 240764657 240764741 -12491842 - MADE1 DNA Mariner 0 80 1 2830 164 29 53 chr2 240765036 240765740 -12490843 - LTR49-int LTR ERV1 -632 5699 5193 251 161 0 16 chr2 240766378 240766440 -12490143 + GA-rich Low_complexity Low_complexity 2 62 0 4154 213 73 76 chr2 240766900 240768291 -12488292 - LTR49-int LTR ERV1 -1032 3904 2583 2082 135 0 26 chr2 240768291 240768603 -12487980 + AluSx SINE Alu 1 304 -8 4154 213 73 76 chr2 240768603 240769626 -12486957 - LTR49-int LTR ERV1 -2353 2583 1558 1601 158 46 60 chr2 240769317 240769684 -12486899 - LTR57-int LTR ERVL -3748 1595 1234 * 334 218 101 33 chr2 240769610 240769762 -12486821 - LTR49-int LTR ERV1 -3523 1413 924 * 788 174 0 14 chr2 240769770 240769914 -12486669 - LTR49-int LTR ERV1 -3388 2943 2802 226 125 25 0 chr2 240769914 240769954 -12486629 - MER67D LTR ERV1 -354 160 120 2545 154 122 0 chr2 240771467 240771908 -12484675 - LTR44 LTR ERV1 0 519 25 2851 166 35 4 chr2 240772006 240772488 -12484095 + LOR1a LTR ERV1 1 497 0 2180 164 22 6 chr2 240772488 240772853 -12483730 + LOR1a-int LTR ERV1 1 371 -7749 4301 106 58 67 chr2 240772876 240773285 -12483298 + LOR1-int LTR ERV1 217 628 -7492 2149 107 0 32 chr2 240773285 240773593 -12482990 - AluSc SINE Alu -5 304 7 4301 106 58 67 chr2 240773593 240773627 -12482956 + LOR1-int LTR ERV1 628 661 -7459 1925 140 0 0 chr2 240773627 240773898 -12482685 - AluSx SINE Alu -11 301 31 4301 106 58 67 chr2 240773898 240774198 -12482385 + LOR1-int LTR ERV1 661 954 -7166 909 153 0 0 chr2 240774198 240774329 -12482254 + AluJb SINE Alu 1 131 -181 7549 88 57 52 chr2 240774329 240774440 -12482143 + LOR1-int LTR ERV1 939 1048 -7072 2046 157 0 0 chr2 240774440 240774734 -12481849 + AluSq SINE Alu 1 294 -19 7549 88 57 52 chr2 240774734 240774865 -12481718 + LOR1-int LTR ERV1 1048 1177 -6943 2136 113 0 66 chr2 240774865 240775200 -12481383 + AluSq SINE Alu 1 313 0 7549 88 57 52 chr2 240775200 240776256 -12480327 + LOR1-int LTR ERV1 1177 2244 -5876 34305 104 14 12 chr2 240776258 240781347 -12475236 + L1P LINE L1 11 5107 -1039 325 134 0 134 chr2 240782137 240782256 -12474327 - AluSp/q SINE Alu -1 302 200 324 160 0 90 chr2 240782409 240782509 -12474074 - AluS SINE Alu -212 91 1 24 0 0 0 chr2 240783988 240784012 -12472571 + GC_rich Low_complexity Low_complexity 1 24 0 6724 64 5 21 chr2 240834346 240834419 -12422164 + L1P LINE L1 2771 2844 -3302 2892 19 0 0 chr2 240834419 240834733 -12421850 + AluYb8 SINE Alu 1 314 -4 6724 64 5 21 chr2 240834733 240835581 -12421002 + L1P LINE L1 2844 3678 -2468 752 124 0 0 chr2 240835786 240835891 -12420692 + U6 snRNA snRNA 1 105 -2 1118 177 183 57 chr2 240835964 240836314 -12420269 - MSTD LTR MaLR 0 396 3 229 83 83 0 chr2 240836965 240837001 -12419582 + Tigger3(Golem) DNA MER2_type 3000 3038 0 229 143 0 0 chr2 240837001 240837035 -12419548 + MLT1C LTR MaLR 434 467 0 2240 109 3 16 chr2 240837584 240837897 -12418686 + AluSx SINE Alu 1 309 -3 532 283 35 20 chr2 240838629 240838827 -12417756 + LTR16C LTR ERVL 79 279 -212 285 237 17 0 chr2 240838875 240838934 -12417649 + LTR16C LTR ERVL 432 491 0 1674 137 0 19 chr2 240839412 240839683 -12416900 - AluJb SINE Alu -5 307 42 34 24 0 0 chr2 240840486 240840527 -12416056 + AT_rich Low_complexity Low_complexity 1 41 0 306 0 0 0 chr2 240840643 240840677 -12415906 + (TG)n Simple_repeat Simple_repeat 2 35 0 1885 160 10 10 chr2 240840680 240840992 -12415591 - AluJb SINE Alu 0 312 1 22 0 0 0 chr2 240841003 240841025 -12415558 + AT_rich Low_complexity Low_complexity 1 22 0 2116 100 4 0 chr2 240841234 240841505 -12415078 + AluSx SINE Alu 1 272 -40 3772 256 20 32 chr2 240841605 240841855 -12414728 + L1 LINE L1 1942 2193 -3953 2398 106 0 0 chr2 240841855 240842167 -12414416 + AluSq SINE Alu 1 312 -1 3772 256 20 32 chr2 240842167 240842712 -12413871 + L1 LINE L1 2193 2743 -3403 2113 132 0 0 chr2 240842712 240843025 -12413558 + AluSg SINE Alu 1 313 0 3772 256 20 32 chr2 240843025 240843611 -12412972 + L1 LINE L1 2743 3310 -2836 895 126 7 0 chr2 240843612 240843747 -12412836 + AluJb SINE Alu 154 289 -23 1174 71 0 0 chr2 240843764 240843919 -12412664 + L1P4 LINE L1 5306 5460 -706 1247 119 40 25 chr2 240844489 240844690 -12411893 + AluJo SINE Alu 87 290 -22 334 258 16 31 chr2 240844902 240845030 -12411553 + L2 LINE L2 2590 2715 -599 2351 118 90 24 chr2 240845116 240845538 -12411045 - LTR7 LTR ERV1 0 450 1 400 62 0 78 chr2 240845538 240845602 -12410981 - HERVH LTR ERV1 0 7713 7655 1630 147 11 22 chr2 240845603 240845643 -12410940 + AluSx SINE Alu 27 66 -246 4304 69 4 2 chr2 240845643 240846196 -12410387 + MER41A LTR ERV1 1 554 0 1630 147 11 22 chr2 240846196 240846427 -12410156 + AluSx SINE Alu 66 295 -17 2027 150 74 6 chr2 240846440 240846806 -12409777 + L1M4 LINE L1 5254 5644 -540 1949 119 0 34 chr2 240846842 240847137 -12409446 + AluSg SINE Alu 1 285 -25 717 184 88 40 chr2 240848068 240848318 -12408265 - LTR37B LTR ERV1 -8 460 199 2328 82 0 0 chr2 240848521 240848885 -12407698 - AluSx SINE Alu 0 366 3 1332 187 5 0 chr2 240849214 240849428 -12407155 - MER58A DNA MER1_type -9 215 1 204 316 13 13 chr2 240849659 240849738 -12406845 - L2 LINE L2 -970 2344 2266 1003 73 0 8 chr2 240849750 240849874 -12406709 + AluSp SINE Alu 1 123 -190 1936 159 0 0 chr2 240850046 240850353 -12406230 - AluSx SINE Alu 0 309 3 1644 195 23 0 chr2 240850546 240850848 -12405735 + AluJb SINE Alu 1 309 -3 644 204 11 31 chr2 240850848 240851189 -12405394 + GA-rich Low_complexity Low_complexity 1 334 0 16684 131 14 23 chr2 240851197 240853915 -12402668 + L1P LINE L1 11 2702 -3444 826 117 0 0 chr2 240854015 240854126 -12402457 + AluSg/x SINE Alu 180 290 -20 190 412 59 9 chr2 240854364 240854585 -12401998 - L3 LINE CR1 -1325 252 21 200 295 121 52 chr2 240854645 240854818 -12401765 + MIR SINE MIR 8 192 -70 2401 71 3 34 chr2 240855574 240855897 -12400686 - AluSp SINE Alu 0 313 1 2146 123 7 10 chr2 240856034 240856335 -12400248 - AluSx SINE Alu -12 300 1 405 203 40 123 chr2 240856530 240856757 -12399826 - LTR33 LTR ERVL -289 232 25 234 209 22 88 chr2 240856864 240856955 -12399628 + L1MEd LINE L1 483 567 -5552 22 35 0 0 chr2 240857139 240857168 -12399415 + AT_rich Low_complexity Low_complexity 1 29 0 419 254 87 23 chr2 240857579 240857752 -12398831 - MIR SINE MIR -1 261 78 988 102 0 0 chr2 240857839 240857966 -12398617 + FLAM_C SINE Alu 1 127 -16 531 260 0 20 chr2 240858094 240858240 -12398343 - MER112 DNA MER1_type -101 159 17 251 150 0 67 chr2 240858563 240858623 -12397960 - MER103 DNA DNA -109 57 2 315 582 11 45 chr2 240858848 240859025 -12397558 - AluYb8 SINE Alu -3 305 135 907 127 25 28 chr2 240859044 240859153 -12397430 - L1MA4 LINE L1 -60 6240 6132 2084 112 0 45 chr2 240859153 240859466 -12397117 - AluSx SINE Alu -13 299 1 907 127 25 28 chr2 240859466 240859543 -12397040 - L1MA4 LINE L1 -168 6132 6056 452 302 207 28 chr2 240859546 240860155 -12396428 - L1M4 LINE L1 -765 5381 4664 1728 170 3 24 chr2 240860174 240860313 -12396270 + AluJo SINE Alu 1 141 -177 2247 108 0 7 chr2 240860313 240860610 -12395973 + AluSx SINE Alu 1 295 -17 1728 170 3 24 chr2 240860610 240860794 -12395789 + AluJo SINE Alu 141 318 0 2326 114 0 0 chr2 240860867 240861165 -12395418 + AluSx SINE Alu 1 298 -14 236 275 14 0 chr2 240861963 240862032 -12394551 - L2 LINE L2 -509 2805 2736 27 0 0 0 chr2 240862053 240862080 -12394503 + AT_rich Low_complexity Low_complexity 1 27 0 2078 138 0 0 chr2 240862080 240862369 -12394214 - AluSx SINE Alu -23 289 1 6097 131 20 36 chr2 240862369 240862727 -12393856 - L1MC1 LINE L1 -5 6328 5966 2247 117 3 0 chr2 240862727 240863034 -12393549 - AluSx SINE Alu -4 308 1 6097 131 20 36 chr2 240863034 240863699 -12392884 - L1MC1 LINE L1 -367 5966 5321 1698 179 10 3 chr2 240863799 240864089 -12392494 - MER7C DNA MER2_type -310 292 1 1648 182 66 75 chr2 240864089 240864245 -12392338 - MLT1C LTR MaLR -32 435 279 2297 104 0 7 chr2 240864245 240864552 -12392031 - AluSx SINE Alu -7 305 1 1648 182 66 75 chr2 240864552 240864834 -12391749 - MLT1C LTR MaLR -188 279 1 1608 197 3 13 chr2 240864865 240864999 -12391584 + AluJo SINE Alu 1 135 -177 2046 112 3 24 chr2 240864999 240865294 -12391289 + AluSg SINE Alu 15 303 -7 1608 197 3 13 chr2 240865294 240865458 -12391125 + AluJo SINE Alu 135 296 -16 2276 98 3 0 chr2 240865514 240865831 -12390752 + AluSp SINE Alu 1 318 0 1848 170 0 29 chr2 240865892 240866198 -12390385 - AluJo SINE Alu -15 297 1 1047 126 0 74 chr2 240866327 240866502 -12390081 + AluSg/x SINE Alu 135 296 -14 236 267 93 0 chr2 240866515 240866601 -12389982 + MARNA DNA Mariner 443 536 -50 237 65 0 0 chr2 240866740 240866771 -12389812 + (TCCCC)n Simple_repeat Simple_repeat 2 32 0 1138 165 169 31 chr2 240866776 240866888 -12389695 - AluJo SINE Alu -13 289 194 207 0 0 0 chr2 240866888 240866911 -12389672 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2096 112 18 0 chr2 240866912 240867190 -12389393 - AluSq SINE Alu -30 283 1 1138 165 169 31 chr2 240867190 240867329 -12389254 - AluJo SINE Alu -107 195 1 181 196 36 0 chr2 240867338 240867394 -12389189 + (TCTA)n Simple_repeat Simple_repeat 3 60 0 812 196 77 29 chr2 240867481 240867690 -12388893 + MER20 DNA MER1_type 1 219 0 27 29 0 0 chr2 240868110 240868144 -12388439 + AT_rich Low_complexity Low_complexity 1 34 0 2219 113 3 0 chr2 240868244 240868537 -12388046 - AluSp SINE Alu -15 298 5 367 264 216 30 chr2 240868580 240868849 -12387734 - L1MC/D LINE L1 -2050 5758 5440 1393 95 5 0 chr2 240868951 240869151 -12387432 + L1PA13 LINE L1 5963 6163 0 1496 168 95 11 chr2 240869155 240869440 -12387143 + AluSx SINE Alu 1 307 0 321 108 27 14 chr2 240869576 240869650 -12386933 + GA-rich Low_complexity Low_complexity 2 76 0 1002 54 78 0 chr2 240870793 240870922 -12385661 - MER85 DNA T2_type 0 139 1 26 0 0 0 chr2 240871102 240871128 -12385455 + AT_rich Low_complexity Low_complexity 1 26 0 2276 105 7 0 chr2 240871145 240871449 -12385134 - AluSx SINE Alu -6 306 1 2221 138 0 0 chr2 240871492 240871804 -12384779 - AluSx SINE Alu 0 312 1 769 167 0 40 chr2 240874503 240874629 -12381954 + AluSq/x SINE Alu 2 122 -191 10950 64 5 0 chr2 240874729 240876928 -12379655 + L1PA6 LINE L1 3943 6154 0 512 119 0 37 chr2 240876929 240877038 -12379545 + (GGGAA)n Simple_repeat Simple_repeat 5 109 0 211 271 0 0 chr2 240877672 240877720 -12378863 - L2 LINE L2 -5 3267 3220 814 231 19 0 chr2 240877733 240877889 -12378694 - MER63A DNA MER1_type -25 185 27 281 313 110 6 chr2 240877904 240878003 -12378580 - L2 LINE L2 -41 3272 3185 243 0 0 0 chr2 240878003 240878030 -12378553 + (ATTG)n Simple_repeat Simple_repeat 2 28 0 281 313 110 6 chr2 240878030 240878093 -12378490 - L2 LINE L2 -128 3185 3093 1897 136 0 39 chr2 240878134 240878413 -12378170 + AluJo SINE Alu 3 270 -42 603 0 0 0 chr2 240878413 240878480 -12378103 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 2071 121 0 11 chr2 240878482 240878784 -12377799 + AluSx SINE Alu 5 303 0 1641 263 118 17 chr2 240878878 240878917 -12377666 + L2 LINE L2 1672 1706 -1608 2416 69 0 3 chr2 240878917 240879207 -12377376 + AluSc SINE Alu 1 289 -20 1641 263 118 17 chr2 240879207 240879753 -12376830 + L2 LINE L2 1706 2316 -998 247 259 17 0 chr2 240879753 240879811 -12376772 + L2 LINE L2 2685 2743 -571 1570 204 15 36 chr2 240879811 240879878 -12376705 + L1M4 LINE L1 4871 4938 -1208 1967 140 43 35 chr2 240879878 240880250 -12376333 + THE1C LTR MaLR 1 375 0 1570 204 15 36 chr2 240880250 240880359 -12376224 + L1M4 LINE L1 4938 5048 -1098 2640 139 26 19 chr2 240880359 240880782 -12375801 + MSTC LTR MaLR 3 428 0 1570 204 15 36 chr2 240880782 240881015 -12375568 + L1M4 LINE L1 5048 5272 -874 420 278 0 0 chr2 240881046 240881136 -12375447 - L1MC4 LINE L1 -1339 6703 6614 370 284 23 0 chr2 240881060 240881148 -12375435 + L1MC4 LINE L1 6614 6703 -1339 * 350 247 0 13 chr2 240881125 240881202 -12375381 - L1MCa LINE L1 -4356 2070 1995 * 359 326 0 0 chr2 240881180 240881269 -12375314 + L1MC4 LINE L1 6614 6702 -1340 * 384 300 0 0 chr2 240881194 240881284 -12375299 - L1MC4 LINE L1 -1339 6703 6614 2183 108 0 7 chr2 240881293 240881580 -12375003 - AluSq SINE Alu -17 296 12 2214 114 30 0 chr2 240881753 240882052 -12374531 + AluSg SINE Alu 1 308 -2 594 164 52 22 chr2 240882441 240882597 -12373986 - L1PB1 LINE L1 -3 6148 5988 244 58 0 77 chr2 240882597 240882649 -12373934 + (TTC)n Simple_repeat Simple_repeat 1 48 0 573 216 11 22 chr2 240882651 240882832 -12373751 + CT-rich Low_complexity Low_complexity 1 179 0 2112 117 0 0 chr2 240882832 240883106 -12373477 - AluSx SINE Alu -38 274 1 1650 104 41 75 chr2 240883107 240883192 -12373391 - L1PB1 LINE L1 -120 6031 5947 2746 139 37 15 chr2 240883192 240883979 -12372604 - L1MA4A LINE L1 -366 5937 5098 1318 179 147 23 chr2 240884431 240884738 -12371845 - MER7A DNA MER2_type -3 343 1 2297 82 0 0 chr2 240884945 240885274 -12371309 - AluSg SINE Alu 0 329 1 1508 186 54 27 chr2 240885384 240885680 -12370903 - AluJo SINE Alu -8 304 1 2068 120 23 20 chr2 240886300 240886601 -12369982 + AluSx SINE Alu 1 302 -10 228 364 57 36 chr2 240887389 240887529 -12369054 + L3 LINE CR1 1430 1572 -5 236 230 112 41 chr2 240887599 240887726 -12368857 + MIR SINE MIR 15 151 -66 364 279 25 25 chr2 240888613 240888735 -12367848 + MER34 LTR ERV1 10 131 -411 1030 161 31 0 chr2 240888760 240888952 -12367631 + L1M2 LINE L1 5411 5608 -704 30061 99 12 26 chr2 240888964 240893463 -12363120 + L1PA7 LINE L1 1 4457 -2012 2472 71 3 10 chr2 240893463 240893771 -12362812 + AluSp SINE Alu 1 306 -7 30061 99 12 26 chr2 240893771 240895753 -12360830 + L1PA7 LINE L1 4457 6466 -3 491 233 96 29 chr2 240895758 240896043 -12360540 + LTR48 LTR ERV1 228 727 -60 571 200 0 70 chr2 240896052 240896167 -12360416 - AluJb SINE Alu -192 120 14 1747 157 24 14 chr2 240896174 240896490 -12360093 - AluJb SINE Alu 0 319 1 1910 151 7 10 chr2 240896492 240896790 -12359793 - AluJo SINE Alu -15 297 1 442 224 30 15 chr2 240897206 240897340 -12359243 - L1MA9 LINE L1 -92 6220 6085 185 83 28 0 chr2 240897340 240897376 -12359207 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1976 76 0 0 chr2 240897405 240897643 -12358940 - AluY SINE Alu -73 238 1 2338 115 0 0 chr2 240897713 240898017 -12358566 - AluSx SINE Alu -8 304 1 650 228 23 23 chr2 240898158 240898329 -12358254 - MER104 DNA Tc2 -3 177 7 306 283 66 19 chr2 240898334 240898440 -12358143 - MIR SINE MIR -121 141 31 281 331 37 29 chr2 240899003 240899139 -12357444 - L2 LINE L2 0 3272 3136 701 198 8 0 chr2 240899243 240899364 -12357219 + FLAM_A SINE Alu 1 122 -20 378 0 0 0 chr2 240899364 240899406 -12357177 + (CTAA)n Simple_repeat Simple_repeat 2 43 0 328 379 6 0 chr2 240899771 240899945 -12356638 - L2 LINE L2 -216 3056 2882 295 181 97 14 chr2 240901188 240901260 -12355323 + MLT1J LTR MaLR 232 309 -202 2198 122 0 19 chr2 240901598 240901917 -12354666 - AluSq SINE Alu 0 313 1 189 0 0 0 chr2 240902128 240902149 -12354434 + (CCCA)n Simple_repeat Simple_repeat 3 23 0 691 308 82 40 chr2 240902199 240902832 -12353751 + L2 LINE L2 1595 2254 -1060 516 278 73 66 chr2 240903072 240903345 -12353238 + L2 LINE L2 2956 3230 -42 306 262 29 10 chr2 240903362 240903465 -12353118 + MLT1L LTR MaLR 511 615 0 204 261 46 0 chr2 240903505 240903570 -12353013 - L3 LINE CR1 -312 1265 1198 528 299 16 11 chr2 240903750 240903937 -12352646 + MER5A DNA MER1_type 1 188 -1 337 233 12 23 chr2 240904166 240904252 -12352331 + L2 LINE L2 3224 3308 -5 306 200 129 0 chr2 240904256 240904326 -12352257 + L2 LINE L2 3231 3309 -4 2420 94 0 3 chr2 240904479 240904787 -12351796 + AluSx SINE Alu 1 307 -5 987 205 0 0 chr2 240905161 240905332 -12351251 + AluJb SINE Alu 139 309 -3 585 285 34 34 chr2 240905455 240905690 -12350893 + MLT1E LTR MaLR 1 235 -358 387 247 64 82 chr2 240906034 240906084 -12350499 + L1ME4a LINE L1 5777 5826 -295 2240 104 0 3 chr2 240906084 240906381 -12350202 + AluSx SINE Alu 1 296 -16 387 247 64 82 chr2 240906381 240906607 -12349976 + L1ME4a LINE L1 5826 6049 -72 3287 143 5 13 chr2 240907232 240907337 -12349246 - L1MB3 LINE L1 0 6183 6079 1944 104 125 32 chr2 240907337 240907537 -12349046 - MER51B LTR ERV1 0 377 197 2507 53 0 7 chr2 240907537 240907836 -12348747 + AluY SINE Alu 1 297 -14 1944 104 125 32 chr2 240907836 240907980 -12348603 - MER51B LTR ERV1 -180 197 1 3287 143 5 13 chr2 240907980 240908428 -12348155 - L1MB3 LINE L1 -104 6079 5634 1771 136 71 42 chr2 240908887 240909241 -12347342 + LTR10A LTR ERV1 185 548 -61 2159 112 26 3 chr2 240909524 240909828 -12346755 - AluSq SINE Alu -2 311 1 2103 119 65 0 chr2 240910512 240910848 -12345735 - MER51B LTR ERV1 -19 358 1 4206 70 26 9 chr2 240910940 240911370 -12345213 + MER41A LTR ERV1 1 443 -111 2166 138 0 3 chr2 240911370 240911681 -12344902 - AluSx SINE Alu -2 310 1 4206 70 26 9 chr2 240911681 240911795 -12344788 + MER41A LTR ERV1 443 554 0 219 261 0 0 chr2 240912186 240912232 -12344351 - L2 LINE L2 -23 3290 3245 1871 85 0 4 chr2 240912466 240912701 -12343882 + AluSq SINE Alu 1 234 -79 192 77 0 0 chr2 240912708 240912734 -12343849 + (A)n Simple_repeat Simple_repeat 1 26 0 2111 141 3 3 chr2 240914270 240914582 -12342001 + AluSx SINE Alu 1 312 0 2291 95 0 7 chr2 240915958 240916252 -12340331 - AluSc SINE Alu -17 292 1 637 94 0 0 chr2 240917079 240917164 -12339419 + AluSg/x SINE Alu 217 301 -8 699 236 6 6 chr2 240917205 240917362 -12339221 + MIR SINE MIR 102 258 -4 273 271 149 9 chr2 240917850 240917957 -12338626 + MIR SINE MIR 109 230 -32 2141 135 19 11 chr2 240917963 240918175 -12338408 - MLT1B LTR MaLR -1 389 171 2325 102 3 3 chr2 240918175 240918478 -12338105 - AluSc SINE Alu -6 303 1 2141 135 19 11 chr2 240918478 240918635 -12337948 - MLT1B LTR MaLR -219 171 17 2418 267 265 33 chr2 240918822 240919763 -12336820 + L2 LINE L2 800 1521 -1793 2402 70 3 0 chr2 240919763 240920049 -12336534 - AluSp SINE Alu -26 287 1 1563 92 5 0 chr2 240920049 240920244 -12336339 - AluSp SINE Alu -4 309 113 2418 267 265 33 chr2 240920244 240920269 -12336314 + L2 LINE L2 1521 1539 -1775 1945 167 3 0 chr2 240920269 240920580 -12336003 - AluSx SINE Alu 0 312 1 2418 267 265 33 chr2 240920580 240920788 -12335795 + L2 LINE L2 1539 1697 -1617 2412 88 3 0 chr2 240920788 240921094 -12335489 - AluSx SINE Alu -3 309 3 2418 267 265 33 chr2 240921094 240921298 -12335285 + L2 LINE L2 1697 1852 -1462 1893 140 17 7 chr2 240921298 240921590 -12334993 - AluJb SINE Alu -7 305 11 180 0 0 0 chr2 240921592 240921612 -12334971 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1886 102 14 56 chr2 240921612 240921897 -12334686 - AluSq SINE Alu -30 283 11 2418 267 265 33 chr2 240921897 240921958 -12334625 + L2 LINE L2 1852 1898 -1416 2133 84 95 0 chr2 240921958 240922243 -12334340 - AluSx SINE Alu 0 312 1 2418 267 265 33 chr2 240922243 240922549 -12334034 + L2 LINE L2 1898 2961 -353 2416 68 6 13 chr2 240922690 240923001 -12333582 - AluSg SINE Alu -1 309 1 391 272 110 56 chr2 240923153 240923368 -12333215 - MIR SINE MIR 0 262 38 22 94 0 0 chr2 240923955 240924019 -12332564 + GC_rich Low_complexity Low_complexity 1 64 0 200 219 31 0 chr2 240924459 240924523 -12332060 + (CGGGG)n Simple_repeat Simple_repeat 2 67 0 195 323 48 42 chr2 240924695 240924862 -12331721 - L2 LINE L2 -27 3286 3119 22 0 0 0 chr2 240925660 240925682 -12330901 + AT_rich Low_complexity Low_complexity 1 22 0 361 239 65 39 chr2 240925880 240926035 -12330548 - L1ME4a LINE L1 -4 6117 5959 1890 147 20 0 chr2 240926643 240926936 -12329647 - AluJb SINE Alu -7 305 7 30 27 0 0 chr2 240927493 240927530 -12329053 + AT_rich Low_complexity Low_complexity 1 37 0 668 152 9 0 chr2 240927530 240927635 -12328948 - FLAM_C SINE Alu -26 117 12 1667 164 22 41 chr2 240927665 240927983 -12328600 + AluJo SINE Alu 1 312 0 260 196 0 0 chr2 240928404 240928450 -12328133 - MER31A LTR ERV1 -87 398 353 470 248 131 34 chr2 240929419 240929625 -12326958 + MIR SINE MIR 7 232 -30 235 348 11 22 chr2 240930205 240930297 -12326286 - MIR SINE MIR -97 111 21 379 368 33 28 chr2 240930576 240930758 -12325825 + MIR3 SINE MIR 22 204 -4 433 269 36 92 chr2 240930944 240931214 -12325369 - MLT1J LTR MaLR -81 430 196 2250 125 0 3 chr2 240931214 240931525 -12325058 + AluSq SINE Alu 1 310 -3 433 269 36 92 chr2 240931525 240931699 -12324884 - MLT1J LTR MaLR -315 196 14 240 235 250 5 chr2 240932376 240932576 -12324007 + L2 LINE L2 2442 2690 -624 394 270 75 31 chr2 240932665 240932891 -12323692 + L2 LINE L2 2913 3148 -165 195 129 0 0 chr2 240932978 240933009 -12323574 + (TGAG)n Simple_repeat Simple_repeat 1 31 0 2300 101 3 13 chr2 240933137 240933445 -12323138 + AluSx SINE Alu 1 305 -7 378 200 44 22 chr2 240933638 240933728 -12322855 + MIR SINE MIR 63 154 -108 2241 108 0 7 chr2 240933731 240934028 -12322555 - AluSx SINE Alu -17 295 1 2345 193 33 7 chr2 240934592 240935047 -12321536 - MLT1C LTR MaLR 0 467 1 262 236 28 0 chr2 240935123 240935195 -12321388 + MER81 DNA DNA 38 111 -3 405 180 50 10 chr2 240935209 240935309 -12321274 - Charlie8 DNA MER1_type -2261 156 53 367 238 12 0 chr2 240936657 240936737 -12319846 + L2 LINE L2 3192 3272 0 444 274 142 5 chr2 240937401 240937620 -12318963 - L1MC4 LINE L1 -1 8041 7793 23 0 0 0 chr2 240937666 240937689 -12318894 + AT_rich Low_complexity Low_complexity 1 23 0 2135 112 4 0 chr2 240937819 240938191 -12318392 + AluSq SINE Alu 5 377 0 1383 152 146 52 chr2 240938452 240938795 -12317788 + THE1C LTR MaLR 1 375 0 540 273 73 6 chr2 240939147 240939312 -12317271 - MIR SINE MIR -32 230 55 369 156 0 0 chr2 240939567 240939631 -12316952 - AluYb8 SINE Alu -7 301 238 2490 55 3 16 chr2 240939631 240939942 -12316641 + AluY SINE Alu 1 307 -4 1635 158 0 0 chr2 240939947 240940193 -12316390 - AluJb SINE Alu -66 246 1 224 75 0 25 chr2 240940926 240940966 -12315617 + (CAAAAA)n Simple_repeat Simple_repeat 2 40 0 2052 94 61 0 chr2 240941028 240941305 -12315278 + AluSp SINE Alu 1 294 -19 1828 187 68 32 chr2 240941400 240941843 -12314740 + LTR2B LTR ERV1 32 490 0 561 222 58 115 chr2 240943510 240943753 -12312830 - L2 LINE L2 0 3313 3085 2216 114 30 0 chr2 240944318 240944616 -12311967 - AluSx SINE Alu -5 307 1 193 161 0 36 chr2 240944965 240945021 -12311562 + GA-rich Low_complexity Low_complexity 2 55 0 1782 134 11 0 chr2 240945128 240945397 -12311186 - AluSq SINE Alu 0 313 42 1550 126 5 0 chr2 240945497 240945711 -12310872 - AluSx SINE Alu -97 215 1 193 242 113 0 chr2 240945783 240945845 -12310738 - L2 LINE L2 -30 3283 3215 210 37 0 0 chr2 240946281 240946308 -12310275 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2263 121 3 0 chr2 240946310 240946608 -12309975 - AluSq SINE Alu -14 299 1 328 203 0 0 chr2 240947086 240947150 -12309433 - MER92C LTR ERV1 0 554 491 2339 90 0 27 chr2 240947230 240947531 -12309052 + AluSx SINE Alu 1 293 -19 326 224 62 99 chr2 240947551 240947712 -12308871 - MER92C LTR ERV1 -389 165 11 2180 104 0 36 chr2 240947719 240948028 -12308555 + AluSx SINE Alu 2 299 -13 1179 68 12 12 chr2 240948241 240948403 -12308180 - L1PA6 LINE L1 0 6154 5993 1523 124 0 0 chr2 240948432 240948642 -12307941 + AluSg/x SINE Alu 96 305 -5 379 279 0 0 chr2 240949061 240949172 -12307411 - MER31-int LTR ERV1 -467 4469 4359 394 211 174 43 chr2 240949230 240949391 -12307192 - LTR37A LTR ERV1 -199 227 46 3327 222 50 67 chr2 240949395 240950524 -12306059 - MER31-int LTR ERV1 -655 4281 3172 2227 112 0 0 chr2 240950524 240950811 -12305772 + AluSg SINE Alu 1 287 -23 198 0 0 0 chr2 240950818 240950840 -12305743 + (TAAAA)n Simple_repeat Simple_repeat 5 26 0 198 278 156 22 chr2 240951187 240951277 -12305306 - MER5A DNA MER1_type -87 102 1 1979 137 29 0 chr2 240951281 240951558 -12305025 + AluSx SINE Alu 1 285 -27 765 125 0 0 chr2 240951558 240951678 -12304905 + (GGAA)n Simple_repeat Simple_repeat 1 120 0 1974 160 0 19 chr2 240951731 240952049 -12304534 + AluJb SINE Alu 1 312 0 23 0 0 0 chr2 240952548 240952571 -12304012 + AT_rich Low_complexity Low_complexity 1 23 0 1598 112 27 0 chr2 240952646 240952870 -12303713 + AluSg/x SINE Alu 81 310 -2 2102 182 48 48 chr2 240952982 240953487 -12303096 - MLT1D LTR MaLR 0 505 1 1218 210 0 11 chr2 240953645 240953926 -12302657 - L1MEc LINE L1 -3101 4464 4187 2101 140 23 0 chr2 240953926 240954226 -12302357 - AluSx SINE Alu -5 307 1 10432 138 81 28 chr2 240954226 240954615 -12301968 - L1 LINE L1 -4711 2854 2487 2278 107 0 40 chr2 240954615 240954941 -12301642 - AluSp SINE Alu 0 313 1 10432 138 81 28 chr2 240954941 240955655 -12300928 - L1 LINE L1 -5078 2487 1812 2225 134 0 0 chr2 240955655 240955962 -12300621 - AluJb SINE Alu -5 307 1 10432 138 81 28 chr2 240955962 240956897 -12299686 - L1 LINE L1 -5753 1812 44 2284 112 3 0 chr2 240956897 240957202 -12299381 - AluSc SINE Alu -3 306 1 2348 113 3 0 chr2 240957205 240957515 -12299068 - AluSq SINE Alu -1 312 2 1606 95 0 114 chr2 240957538 240957801 -12298782 - AluSg/x SINE Alu -14 298 66 335 331 38 83 chr2 240957801 240958197 -12298386 + L2 LINE L2 2485 2862 -452 269 333 101 0 chr2 240958344 240958482 -12298101 + L2 LINE L2 3161 3312 -1 181 344 62 10 chr2 240958993 240959089 -12297494 - L2 LINE L2 -2971 343 243 253 203 25 25 chr2 240959715 240959794 -12296789 - L1M4 LINE L1 -2420 3726 3648 2025 113 0 0 chr2 240959815 240960080 -12296503 + AluSq SINE Alu 1 265 -48 1776 151 39 56 chr2 240960253 240960441 -12296142 - AluJb SINE Alu -12 300 117 2655 56 0 0 chr2 240960441 240960747 -12295836 + AluY SINE Alu 1 306 -5 1776 151 39 56 chr2 240960747 240960863 -12295720 - AluJb SINE Alu -195 117 1 789 172 46 17 chr2 240960938 240961112 -12295471 - L1MB8 LINE L1 -6 6172 5994 673 320 248 29 chr2 240961540 240962660 -12293923 + L3 LINE CR1 211 1576 -1 3725 267 159 31 chr2 240962757 240964511 -12292072 - L1MEc LINE L1 -4278 3468 1465 1667 136 36 63 chr2 240964511 240964813 -12291770 + AluJb SINE Alu 1 294 -18 3725 267 159 31 chr2 240964813 240964907 -12291676 - L1MEc LINE L1 -6281 1465 1384 549 263 104 48 chr2 240966045 240966315 -12290268 + MER102a DNA MER1_type 32 316 -14 215 269 0 0 chr2 240969865 240969917 -12286666 + L2 LINE L2 3262 3313 0 276 300 25 8 chr2 240969920 240970040 -12286543 - MIR SINE MIR -114 148 27 31 0 0 0 chr2 240971312 240971343 -12285240 + AT_rich Low_complexity Low_complexity 1 31 0 2376 100 0 10 chr2 240971392 240971703 -12284880 + AluSg SINE Alu 1 308 -2 391 258 21 0 chr2 240973051 240973144 -12283439 - MIR3 SINE MIR -27 181 87 210 263 139 49 chr2 240973668 240973821 -12282762 + MIR3 SINE MIR 13 191 -71 408 295 41 0 chr2 240974542 240974690 -12281893 + MIR SINE MIR 22 181 -81 1551 174 6 84 chr2 240975376 240975510 -12281073 + AluJb SINE Alu 1 144 -168 2176 106 23 0 chr2 240975510 240975813 -12280770 + AluSp SINE Alu 1 310 -3 1551 174 6 84 chr2 240975813 240976000 -12280583 + AluJb SINE Alu 144 297 -15 375 274 20 55 chr2 240976267 240976413 -12280170 - L3 LINE CR1 -67 1510 1370 22 35 0 0 chr2 240977875 240977904 -12278679 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr2 240978211 240978235 -12278348 + AT_rich Low_complexity Low_complexity 1 24 0 198 0 0 0 chr2 240978272 240978294 -12278289 + (CA)n Simple_repeat Simple_repeat 1 22 0 236 319 52 33 chr2 240978294 240978507 -12278076 - L1ME4a LINE L1 -50 6071 5855 355 298 101 12 chr2 240978651 240978819 -12277764 - L1ME4a LINE L1 -406 5715 5533 375 340 21 0 chr2 240979693 240979884 -12276699 - L1ME4a LINE L1 -2239 3907 3713 239 281 51 31 chr2 240980239 240980435 -12276148 - L1ME4a LINE L1 -2829 3317 3118 1514 160 38 62 chr2 240980701 240980989 -12275594 - AluJb SINE Alu -31 281 1 1711 152 10 17 chr2 240981975 240982271 -12274312 - AluJo SINE Alu -14 298 5 877 144 8 0 chr2 240982290 240982422 -12274161 - AluJb SINE Alu -179 133 1 1092 276 26 6 chr2 240983369 240983709 -12272874 + LTR16B LTR ERVL 109 455 -9 398 282 153 0 chr2 240985314 240985477 -12271106 + L1MC4a LINE L1 5706 5893 -1915 2144 113 0 31 chr2 240985778 240986097 -12270486 + AluSx SINE Alu 4 312 0 389 269 54 85 chr2 240986787 240987010 -12269573 - MLT1K LTR MaLR -201 387 172 390 230 80 80 chr2 240987065 240987252 -12269331 + MLT1K LTR MaLR 396 582 -6 342 204 23 23 chr2 240987334 240987422 -12269161 + L1ME4a LINE L1 5971 6058 -63 234 150 0 0 chr2 240989977 240990017 -12266566 + (GGA)n Simple_repeat Simple_repeat 1 40 0 243 0 0 0 chr2 240990266 240990293 -12266290 + (CAGAC)n Simple_repeat Simple_repeat 3 29 0 620 237 102 92 chr2 240992145 240992393 -12264190 - L1ME4a LINE L1 -49 6072 5828 1964 124 48 10 chr2 240992393 240992683 -12263900 - AluSx SINE Alu -11 301 1 620 237 102 92 chr2 240992683 240992975 -12263608 - L1ME4a LINE L1 -293 5828 5527 1128 165 59 3 chr2 240993688 240993943 -12262640 - MER7A DNA MER2_type -2 334 2 27 49 0 0 chr2 240994062 240994103 -12262480 + AT_rich Low_complexity Low_complexity 1 41 0 227 303 26 0 chr2 240994976 240995052 -12261531 - MIR3 SINE MIR -23 185 108 2573 179 72 17 chr2 240995225 240995774 -12260809 - L1MC4 LINE L1 -19 8023 7210 1743 181 7 0 chr2 240995775 240996068 -12260515 + AluJb SINE Alu 1 295 -17 245 232 72 14 chr2 240996071 240996140 -12260443 - MER5B DNA MER1_type -98 80 8 2022 140 0 3 chr2 240996833 240997140 -12259443 - AluSx SINE Alu -6 306 1 2136 62 28 68 chr2 240997781 240998105 -12258478 - AluY SINE Alu 0 311 1 288 77 0 0 chr2 240998358 240998397 -12258186 + (TCCC)n Simple_repeat Simple_repeat 4 42 0 801 177 57 0 chr2 240998404 240998545 -12258038 - FRAM SINE Alu -27 149 1 1329 162 0 14 chr2 240998566 240998788 -12257795 - AluJb SINE Alu -93 219 1 1179 305 86 33 chr2 240998921 240999679 -12256904 - L2 LINE L2 -568 2746 1949 1330 183 69 23 chr2 240999721 241000067 -12256516 - LTR10C LTR ERV1 -26 557 214 1133 150 64 16 chr2 241000681 241000868 -12255715 - AluJo SINE Alu -12 300 105 2264 61 11 0 chr2 241000869 241001147 -12255436 + AluY SINE Alu 1 281 -30 1131 207 122 29 chr2 241001214 241001590 -12254993 + L1MD1 LINE L1 5816 6226 -16 270 323 140 65 chr2 241001656 241002029 -12254554 + L2 LINE L2 2783 3190 -82 2102 140 0 0 chr2 241002321 241002628 -12253955 + AluSc SINE Alu 1 307 -2 642 272 103 81 chr2 241003888 241004307 -12252276 - L3 LINE CR1 -64 1513 1086 300 154 0 0 chr2 241004504 241004556 -12252027 + (CA)n Simple_repeat Simple_repeat 2 53 0 9793 221 86 51 chr2 241004556 241005066 -12251517 - L1ME1 LINE L1 -80 6155 5664 2432 71 0 3 chr2 241005066 241005363 -12251220 + AluY SINE Alu 1 296 -15 9793 221 86 51 chr2 241005363 241007882 -12248701 - L1ME1 LINE L1 -571 5664 2997 1460 147 110 29 chr2 241007882 241008154 -12248429 - AluJb SINE Alu -18 294 1 9793 221 86 51 chr2 241008154 241009064 -12247519 - L1ME1 LINE L1 -3238 2997 2120 911 244 257 25 chr2 241009851 241010133 -12246450 - L2 LINE L2 -190 3123 2908 756 206 129 21 chr2 241010133 241010327 -12246256 - MER58C DNA MER1_type 0 215 1 911 244 257 25 chr2 241010327 241010655 -12245928 - L2 LINE L2 -405 2908 2376 1290 150 8 83 chr2 241010969 241011024 -12245559 + MSTB LTR MaLR 1 59 -367 1575 175 43 11 chr2 241011024 241011304 -12245279 + AluJb SINE Alu 1 289 -23 1290 150 8 83 chr2 241011304 241011501 -12245082 + MSTB LTR MaLR 59 234 -192 228 287 21 21 chr2 241011543 241011637 -12244946 - L1M4 LINE L1 -1945 4201 4108 22 0 0 0 chr2 241011901 241011923 -12244660 + AT_rich Low_complexity Low_complexity 1 22 0 963 216 58 10 chr2 241011992 241012200 -12244383 - MER20 DNA MER1_type 0 219 2 239 290 57 24 chr2 241012253 241012377 -12244206 + L2 LINE L2 3005 3132 -181 2424 209 157 24 chr2 241012378 241012600 -12243983 + Charlie1a DNA MER1_type 8 199 -2562 2019 80 0 15 chr2 241012600 241012862 -12243721 + AluSc SINE Alu 39 296 -13 2424 209 157 24 chr2 241012862 241013347 -12243236 + Charlie1a DNA MER1_type 199 809 -646 1895 152 17 26 chr2 241013347 241013696 -12242887 - MER47A DNA MER2_type 0 366 21 2182 126 7 0 chr2 241013702 241014011 -12242572 - AluSx SINE Alu -1 311 1 2127 167 131 39 chr2 241014019 241014229 -12242354 + Charlie1a DNA MER1_type 808 997 -1764 2053 143 3 3 chr2 241014229 241014537 -12242046 - AluSx SINE Alu 0 312 5 2127 167 131 39 chr2 241014537 241014914 -12241669 + Charlie1a DNA MER1_type 997 1449 -6 476 319 34 34 chr2 241014938 241015142 -12241441 + L2 LINE L2 3110 3313 0 2037 148 0 0 chr2 241015643 241015981 -12240602 + AluSx SINE Alu 1 312 0 2669 117 28 70 chr2 241016348 241016846 -12239737 + Tigger4(Zombi) DNA MER2_type 2254 2730 -1 518 170 19 47 chr2 241017223 241017329 -12239254 + MER50 LTR ERV1 483 585 -149 806 410 3 92 chr2 241017355 241017660 -12238923 + AluJo SINE Alu 23 300 -12 4485 182 35 82 chr2 241018096 241018672 -12237911 - L1MB4 LINE L1 -2 6178 5576 1960 118 59 3 chr2 241018672 241018959 -12237624 - AluSg SINE Alu -7 303 1 4485 182 35 82 chr2 241018959 241019876 -12236707 - L1MB4 LINE L1 -604 5576 4789 2122 124 0 0 chr2 241019876 241020185 -12236398 - AluSx SINE Alu 0 309 1 4485 182 35 82 chr2 241020185 241020651 -12235932 - L1MB4 LINE L1 -1391 4789 4303 400 249 243 16 chr2 241021708 241021893 -12234690 + MIR SINE MIR 5 231 -31 21 0 0 0 chr2 241022037 241022058 -12234525 + AT_rich Low_complexity Low_complexity 1 21 0 1213 221 159 32 chr2 241022156 241022527 -12234056 - MSTB2 LTR MaLR -37 420 3 309 288 40 48 chr2 241022614 241022739 -12233844 - MIR SINE MIR -92 170 47 351 237 99 20 chr2 241022807 241022959 -12233624 + L1ME LINE L1 5583 5746 -375 403 207 143 94 chr2 241023269 241023472 -12233111 + L1MC5 LINE L1 6714 6926 -1035 278 214 86 90 chr2 241023568 241023800 -12232783 + L1MC4 LINE L1 6953 7184 -777 297 0 0 0 chr2 241023800 241023833 -12232750 + (TA)n Simple_repeat Simple_repeat 1 33 0 2127 133 0 3 chr2 241023833 241024134 -12232449 - AluSx SINE Alu -12 300 1 278 214 86 90 chr2 241024134 241024217 -12232366 + L1MC4 LINE L1 7182 7222 -739 820 233 133 54 chr2 241024366 241024869 -12231714 + L1MC5 LINE L1 7309 7851 -110 1013 129 6 47 chr2 241025415 241025586 -12230997 - AluSg/x SINE Alu -12 300 137 27 0 0 0 chr2 241026701 241026728 -12229855 + AT_rich Low_complexity Low_complexity 1 27 0 2017 92 9 38 chr2 241026734 241027049 -12229534 + AluSq SINE Alu 1 306 -7 2135 115 0 0 chr2 241028066 241028361 -12228222 + AluSg SINE Alu 1 295 -15 2097 106 7 3 chr2 241028439 241028741 -12227842 + AluSx SINE Alu 1 303 -9 354 266 99 54 chr2 241029910 241030168 -12226415 - L1MC/D LINE L1 -775 5371 5153 2339 54 0 3 chr2 241030183 241030515 -12226068 + AluY SINE Alu 1 311 0 655 190 0 8 chr2 241031035 241031156 -12225427 + FLAM_A SINE Alu 18 137 -5 926 308 100 36 chr2 241031566 241031827 -12224756 - L3 LINE CR1 -429 1148 905 1999 119 35 52 chr2 241031827 241032170 -12224413 + MER1B DNA MER1_type 1 337 0 926 308 100 36 chr2 241032170 241032438 -12224145 - L3 LINE CR1 -672 905 585 435 255 29 91 chr2 241032527 241032735 -12223848 + MER112 DNA MER1_type 48 242 -18 2205 76 7 0 chr2 241032864 241033153 -12223430 + AluSp SINE Alu 1 291 -22 21 57 0 0 chr2 241035484 241035519 -12221064 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr2 241036820 241036842 -12219741 + AT_rich Low_complexity Low_complexity 1 22 0 1540 188 0 4 chr2 241036848 241037125 -12219458 + AluJb SINE Alu 5 280 -32 2221 95 0 3 chr2 241037192 241037497 -12219086 + AluSx SINE Alu 1 304 -8 504 246 17 0 chr2 241039398 241039516 -12217067 + MER94 DNA DNA 13 132 -2 22 0 0 0 chr2 241039676 241039698 -12216885 + AT_rich Low_complexity Low_complexity 1 22 0 2103 63 7 33 chr2 241040277 241040578 -12216005 + AluY SINE Alu 1 293 -18 475 125 16 125 chr2 241040804 241040864 -12215719 - L1MB8 LINE L1 -2 6176 6136 1428 179 36 4 chr2 241040864 241041144 -12215439 + AluJo SINE Alu 1 289 -23 475 125 16 125 chr2 241041144 241041211 -12215372 - L1MB8 LINE L1 -42 6136 6063 211 304 244 51 chr2 241041537 241041754 -12214829 + MIR SINE MIR 2 260 -2 2279 83 3 0 chr2 241041915 241042217 -12214366 + AluSq SINE Alu 1 303 -10 1173 169 34 0 chr2 241042339 241042546 -12214037 + AluJb SINE Alu 85 298 -14 488 289 159 42 chr2 241042686 241042899 -12213684 - L1 LINE L1 -1624 4522 4335 1911 93 52 10 chr2 241042899 241043188 -12213395 - AluSq SINE Alu -11 302 2 488 289 159 42 chr2 241043188 241043382 -12213201 - L1 LINE L1 -1811 4335 4067 850 118 7 35 chr2 241043637 241043781 -12212802 - FLAM_C SINE Alu -3 140 1 1473 179 25 44 chr2 241045075 241045393 -12211190 - AluJo SINE Alu 0 312 1 331 318 39 17 chr2 241045926 241046105 -12210478 - MIR SINE MIR -53 209 27 290 316 26 9 chr2 241046108 241046222 -12210361 - MIR SINE MIR -56 206 91 310 256 12 35 chr2 241049330 241049416 -12207167 + MER81 DNA DNA 2 85 -29 1152 176 63 0 chr2 241050360 241050582 -12206001 - MER46A DNA MER2_type 0 236 1 2812 82 8 21 chr2 241050865 241051244 -12205339 + THE1C LTR MaLR 1 374 -1 1457 201 0 11 chr2 241051748 241052031 -12204552 + AluJo SINE Alu 1 280 -32 945 232 11 5 chr2 241052072 241052262 -12204321 + LTR10B LTR ERV1 357 547 0 1753 141 44 17 chr2 241052505 241052802 -12203781 + AluJb SINE Alu 5 309 -3 186 103 0 0 chr2 241053026 241053055 -12203528 + (A)n Simple_repeat Simple_repeat 1 29 0 2005 129 3 3 chr2 241055463 241055766 -12200817 + AluSx SINE Alu 1 303 -9 335 289 123 44 chr2 241056304 241056532 -12200051 + L2 LINE L2 2992 3237 -76 384 59 0 0 chr2 241057630 241057681 -12198902 + (GAGAA)n Simple_repeat Simple_repeat 3 53 0 224 183 33 17 chr2 241057698 241057758 -12198825 + GA-rich Low_complexity Low_complexity 1 61 0 2349 168 29 0 chr2 241058210 241058626 -12197957 + MSTA LTR MaLR 1 428 0 344 74 19 0 chr2 241059316 241059370 -12197213 + L1MA3 LINE L1 6251 6305 0 186 313 62 10 chr2 241059472 241059568 -12197015 - L2 LINE L2 -1 3312 3212 395 274 109 77 chr2 241060012 241060193 -12196390 + L1MC5 LINE L1 7452 7645 -316 2165 89 3 0 chr2 241060193 241060496 -12196087 - AluY SINE Alu -7 304 1 395 274 109 77 chr2 241060496 241060562 -12196021 + L1MC5 LINE L1 7645 7707 -254 3030 141 55 31 chr2 241060563 241061146 -12195437 + L1MA9 LINE L1 5710 6306 -6 1872 151 7 0 chr2 241062129 241062427 -12194156 - AluJo SINE Alu -12 300 1 23 54 0 0 chr2 241063049 241063086 -12193497 + AT_rich Low_complexity Low_complexity 1 37 0 386 245 64 27 chr2 241063217 241063398 -12193185 - L1ME4a LINE L1 -221 5900 5716 1648 158 32 0 chr2 241063421 241063705 -12192878 + AluJb SINE Alu 1 293 -19 210 37 0 0 chr2 241063775 241063802 -12192781 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2025 108 0 0 chr2 241063804 241064083 -12192500 - AluSg SINE Alu -27 283 5 1286 209 20 41 chr2 241064170 241064461 -12192122 + Charlie1b DNA MER1_type 1 392 -2369 2026 82 28 10 chr2 241064461 241064752 -12191831 - AluSg SINE Alu -14 296 1 1286 209 20 41 chr2 241064752 241064882 -12191701 + Charlie1b DNA MER1_type 392 523 0 257 333 0 11 chr2 241065005 241065098 -12191485 + CT-rich Low_complexity Low_complexity 3 94 0 2207 163 92 12 chr2 241065257 241065949 -12190634 + MER21A LTR ERV1 1 858 -62 621 170 55 12 chr2 241066059 241066224 -12190359 + AluY SINE Alu 104 275 -36 767 236 123 100 chr2 241066613 241067125 -12189458 - L1MC4a LINE L1 -728 7233 6730 292 191 16 16 chr2 241068225 241068242 -12188341 + MER3 DNA MER1_type 30 46 -163 771 184 167 6 chr2 241068242 241068416 -12188167 - MER3 DNA MER1_type 0 209 8 2224 81 3 3 chr2 241070664 241070960 -12185623 + AluSp SINE Alu 2 297 -16 2026 113 14 3 chr2 241072544 241072835 -12183748 + AluSx SINE Alu 1 294 -18 183 219 209 55 chr2 241073019 241073064 -12183519 + L3 LINE CR1 246 283 -1294 19820 55 0 4 chr2 241073064 241076365 -12180218 + L1PA6 LINE L1 2835 6152 -2 183 219 209 55 chr2 241076365 241076479 -12180104 + L3 LINE CR1 283 413 -1164 683 342 113 14 chr2 241076691 241077045 -12179538 + L3 LINE CR1 484 872 -705 413 271 113 8 chr2 241077125 241077258 -12179325 - MIR SINE MIR -88 174 28 873 305 83 34 chr2 241077339 241077775 -12178808 + L3 LINE CR1 1006 1462 -115 204 137 59 59 chr2 241078953 241079004 -12177579 - L2 LINE L2 0 3272 3222 1777 102 23 11 chr2 241079006 241079292 -12177291 - AluSq SINE Alu 0 333 45 304 233 142 33 chr2 241079292 241079412 -12177171 - L2 LINE L2 -44 3269 3137 480 278 35 21 chr2 241079820 241079964 -12176619 - L2 LINE L2 0 3313 3168 314 246 164 0 chr2 241080464 241080574 -12176009 + L2 LINE L2 3184 3311 -2 495 226 32 65 chr2 241081637 241081823 -12174760 + MIR3 SINE MIR 8 187 -21 612 272 35 67 chr2 241082472 241082726 -12173857 + MIR SINE MIR 11 256 -6 492 193 52 146 chr2 241083716 241083908 -12172675 - MER58A DNA MER1_type -24 200 27 306 0 0 0 chr2 241084933 241084967 -12171616 + (T)n Simple_repeat Simple_repeat 1 34 0 1190 198 32 0 chr2 241085545 241085762 -12170821 + MER58A DNA MER1_type 1 224 0 1857 132 20 10 chr2 241086946 241087242 -12169341 + AluSx SINE Alu 1 299 -13 644 250 65 30 chr2 241087672 241087872 -12168711 - MIR SINE MIR -49 213 7 25 31 0 0 chr2 241091321 241091353 -12165230 + AT_rich Low_complexity Low_complexity 1 32 0 24 0 0 0 chr2 241091994 241092018 -12164565 + AT_rich Low_complexity Low_complexity 1 24 0 2195 64 51 3 chr2 241093538 241093833 -12162750 - AluY SINE Alu -2 309 1 767 245 93 0 chr2 241094707 241094944 -12161639 + LTR16C LTR ERVL 233 491 0 2339 74 0 3 chr2 241095825 241096134 -12160449 + AluSp SINE Alu 1 308 -5 2525 162 84 68 chr2 241096219 241096659 -12159924 - L1MC3 LINE L1 -8 7777 7323 1966 138 20 0 chr2 241096659 241096963 -12159620 - AluJb SINE Alu -2 310 1 2525 162 84 68 chr2 241096963 241097115 -12159468 - L1MC3 LINE L1 -462 7323 7175 232 191 44 44 chr2 241097120 241097188 -12159395 - MLT1F1 LTR MaLR -465 102 35 2415 81 87 9 chr2 241097446 241097780 -12158803 + THE1B LTR MaLR 5 364 0 224 272 163 0 chr2 241097896 241097988 -12158595 + L2 LINE L2 2426 2532 -782 291 278 183 24 chr2 241098256 241098425 -12158158 - MIR SINE MIR -2 260 65 228 292 0 0 chr2 241098447 241098495 -12158088 + polypyrimidine Low_complexity Low_complexity 2 49 0 1027 78 49 0 chr2 241098495 241098637 -12157946 - AluSp/q SINE Alu -8 305 157 249 310 35 49 chr2 241100707 241100849 -12155734 + MIR SINE MIR 93 232 -30 4200 103 38 71 chr2 241101153 241101858 -12154725 - LTR8 LTR ERV1 -9 682 1 1251 258 36 44 chr2 241102599 241102705 -12153878 + L1MEc LINE L1 1365 1470 -5093 2152 91 7 0 chr2 241102705 241103029 -12153554 - AluSq SINE Alu 0 326 1 1251 258 36 44 chr2 241103029 241103040 -12153543 + L1MEc LINE L1 1470 1480 -5083 3103 116 5 2 chr2 241103040 241103473 -12153110 + MER57B LTR ERV1 1 434 0 1251 258 36 44 chr2 241103473 241103974 -12152609 + L1MEc LINE L1 1480 2106 -4457 2083 106 3 7 chr2 241103974 241104276 -12152307 + AluSc SINE Alu 3 303 -6 2067 238 26 10 chr2 241104286 241104786 -12151797 + L1ME1 LINE L1 5604 6111 -55 2049 111 10 7 chr2 241104904 241105201 -12151382 - AluSx SINE Alu -14 298 1 1629 171 13 20 chr2 241105372 241105676 -12150907 + AluJb SINE Alu 1 302 -10 1792 226 67 61 chr2 241105701 241106735 -12149848 + L1MEc LINE L1 1615 2603 -3612 905 278 109 38 chr2 241106735 241106837 -12149746 + MLT1H LTR MaLR 3 96 -499 2137 128 0 0 chr2 241106837 241107141 -12149442 - AluSx SINE Alu -8 304 1 905 278 109 38 chr2 241107141 241107565 -12149018 + MLT1H LTR MaLR 96 595 0 312 270 0 20 chr2 241108357 241108457 -12148126 + MLT1H LTR MaLR 368 465 -84 5392 91 1 1 chr2 241108708 241109399 -12147184 + LTR8 LTR ERV1 1 691 0 332 41 41 0 chr2 241110606 241110655 -12145928 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 1545 160 4 0 chr2 241110663 241110926 -12145657 - AluJo SINE Alu -48 264 1 182 161 0 0 chr2 241111228 241111259 -12145324 - MER5C DNA MER1_type -131 193 163 1959 122 0 7 chr2 241111573 241111868 -12144715 - AluJo SINE Alu -19 293 1 2127 100 0 52 chr2 241111970 241112300 -12144283 - AluSp SINE Alu 0 313 1 419 237 33 79 chr2 241112410 241112448 -12144135 + MIR SINE MIR 72 110 -152 324 0 0 0 chr2 241112448 241112484 -12144099 + (TG)n Simple_repeat Simple_repeat 2 37 0 1941 137 0 0 chr2 241112484 241112768 -12143815 - AluSx SINE Alu -28 284 1 419 237 33 79 chr2 241112768 241112880 -12143703 + MIR SINE MIR 108 216 -46 396 145 0 0 chr2 241113321 241113390 -12143193 + LOR1a LTR ERV1 238 306 -191 1018 163 195 27 chr2 241113396 241113653 -12142930 + LOR1a LTR ERV1 198 497 0 790 235 76 55 chr2 241113739 241113977 -12142606 + MIR SINE MIR 12 254 -8 8050 43 11 0 chr2 241114418 241115373 -12141210 - LTR5 LTR ERVK -3 966 1 270 153 0 0 chr2 241115392 241115451 -12141132 + (TCCA)n Simple_repeat Simple_repeat 4 62 0 777 199 94 50 chr2 241115470 241115671 -12140912 + MER20 DNA MER1_type 10 219 0 1308 252 118 21 chr2 241116094 241116677 -12139906 + L2 LINE L2 1928 2567 -747 307 233 178 22 chr2 241116676 241116766 -12139817 + L2 LINE L2 3191 3294 -19 * 1902 98 121 103 chr2 241117261 241117640 -12138943 - MLT1B LTR MaLR 0 390 5 641 288 82 20 chr2 241118018 241118324 -12138259 + L2 LINE L2 2989 3313 0 1975 125 0 23 chr2 241118369 241118674 -12137909 - AluSx SINE Alu -14 298 1 361 265 118 14 chr2 241119166 241119377 -12137206 + L1ME4a LINE L1 4490 4722 -1424 251 198 58 66 chr2 241119638 241119759 -12136824 + L1ME4a LINE L1 5314 5433 -688 1787 140 24 0 chr2 241119763 241119888 -12136695 + AluJb SINE Alu 1 122 -190 2073 115 3 10 chr2 241119888 241120202 -12136381 + AluSx SINE Alu 1 312 0 1787 140 24 0 chr2 241120202 241120368 -12136215 + AluJb SINE Alu 122 299 -13 674 283 102 53 chr2 241120457 241121299 -12135284 - L2 LINE L2 0 3313 2367 407 275 81 79 chr2 241121306 241121587 -12134996 + L1ME4a LINE L1 5533 5817 -304 1185 35 42 0 chr2 241121587 241121730 -12134853 + L1PA3 LINE L1 6000 6148 -7 407 275 81 79 chr2 241121730 241121903 -12134680 + L1ME4a LINE L1 5817 5988 -133 2276 165 47 47 chr2 241121968 241122012 -12134571 + MLT1C LTR MaLR 1 44 -423 2254 103 0 0 chr2 241122012 241122313 -12134270 + AluSx SINE Alu 2 302 -10 2276 165 47 47 chr2 241122313 241122735 -12133848 + MLT1C LTR MaLR 43 467 0 239 278 0 0 chr2 241123078 241123132 -12133451 + L1ME4a LINE L1 5692 5745 -376 344 257 95 72 chr2 241123305 241123564 -12133019 + L1M4 LINE L1 3071 3323 -2823 1171 142 5 36 chr2 241123709 241123928 -12132655 - AluJo SINE Alu -90 222 11 304 224 14 49 chr2 241123934 241124039 -12132544 - MLT1E2 LTR MaLR -281 343 244 1163 145 5 0 chr2 241124044 241124237 -12132346 - AluSg/x SINE Alu -12 298 105 475 182 73 73 chr2 241124237 241124347 -12132236 - MLT1E2 LTR MaLR -516 110 1 995 171 55 30 chr2 241124396 241124595 -12131988 - MER20 DNA MER1_type 0 219 16 243 0 0 0 chr2 241124603 241124630 -12131953 + (CA)n Simple_repeat Simple_repeat 2 28 0 213 39 0 0 chr2 241124657 241124683 -12131900 + (CA)n Simple_repeat Simple_repeat 1 26 0 235 248 18 44 chr2 241124695 241124808 -12131775 + L1ME4a LINE L1 5953 6062 -59 359 313 86 51 chr2 241125153 241125466 -12131117 - L1M4 LINE L1 -2662 3484 3161 1272 131 0 0 chr2 241125467 241125658 -12130925 - AluSg/x SINE Alu -2 308 118 1642 101 0 4 chr2 241125658 241125885 -12130698 - AluSq SINE Alu -16 297 72 31 44 0 0 chr2 241125951 241125996 -12130587 + AT_rich Low_complexity Low_complexity 1 45 0 2067 105 13 16 chr2 241125999 241126313 -12130270 - AluSp SINE Alu 0 313 1 359 215 93 19 chr2 241126329 241126436 -12130147 + MLT1J LTR MaLR 6 120 -391 1818 167 10 0 chr2 241126476 241126776 -12129807 - AluJb SINE Alu -1 311 9 241 289 176 8 chr2 241126939 241127224 -12129359 - L1M4 LINE L1 -1445 4701 4373 2020 141 3 6 chr2 241127727 241128039 -12128544 + AluSx SINE Alu 1 311 -1 803 182 8 0 chr2 241128051 241128183 -12128400 + FLAM_C SINE Alu 1 133 0 1334 258 55 12 chr2 241128201 241128620 -12127963 + L1ME3A LINE L1 5639 6075 -95 3852 227 53 19 chr2 241128641 241128937 -12127646 + L1ME2 LINE L1 3999 4284 -1880 2292 78 0 0 chr2 241128937 241129231 -12127352 + AluY SINE Alu 1 294 -17 3852 227 53 19 chr2 241129231 241130464 -12126119 + L1ME2 LINE L1 4284 5571 -593 697 188 14 0 chr2 241130494 241130638 -12125945 + MER97c DNA MER1_type? 26 171 -919 1281 186 92 78 chr2 241130685 241130937 -12125646 + L1ME2 LINE L1 5643 5905 -259 2172 116 0 22 chr2 241130937 241131256 -12125327 + AluSx SINE Alu 1 312 0 1281 186 92 78 chr2 241131256 241131450 -12125133 + L1ME2 LINE L1 5905 6095 -69 852 130 0 8 chr2 241131875 241132006 -12124577 - FLAM_C SINE Alu -13 130 1 220 306 160 29 chr2 241132185 241132567 -12124016 - L2 LINE L2 -1440 1874 1443 506 236 172 0 chr2 241132714 241132871 -12123712 - MER5A DNA MER1_type -5 184 1 356 210 134 0 chr2 241133369 241133506 -12123077 - HsTC2 DNA Tc2 -3 1895 1 1016 176 72 9 chr2 241133517 241133738 -12122845 + Charlie1 DNA MER1_type 8 242 -2519 508 140 67 0 chr2 241133719 241133830 -12122753 + Charlie1 DNA MER1_type 2620 2761 0 * 272 290 10 50 chr2 241134210 241134310 -12122273 + L2 LINE L2 3177 3272 0 399 132 0 0 chr2 241135464 241135532 -12121051 + (TGAG)n Simple_repeat Simple_repeat 1 68 0 33 73 0 0 chr2 241135591 241135659 -12120924 + GC_rich Low_complexity Low_complexity 1 68 0 1912 128 14 0 chr2 241138403 241138726 -12117857 - AluSq SINE Alu 0 327 1 240 167 0 0 chr2 241139227 241139275 -12117308 + (CA)n Simple_repeat Simple_repeat 1 48 0 422 230 183 19 chr2 241142688 241142846 -12113737 - MIR3 SINE MIR -10 198 21 202 250 33 0 chr2 241143560 241143620 -12112963 + L2 LINE L2 2715 2776 -538 306 209 163 0 chr2 241145899 241145985 -12110598 - MIR3 SINE MIR -1 207 108 2303 59 10 0 chr2 241147141 241147430 -12109153 - AluY SINE Alu -19 292 1 497 244 163 20 chr2 241148302 241148534 -12108049 - MIR SINE MIR 0 262 4 294 22 22 22 chr2 241150699 241150744 -12105839 - AluY SINE Alu -263 45 1 322 23 0 0 chr2 241150794 241150837 -12105746 - AluSp/q SINE Alu -8 295 253 402 351 116 36 chr2 241150837 241151002 -12105581 + L1MC4a LINE L1 4727 4877 -1269 2224 98 0 19 chr2 241151002 241151320 -12105263 - AluSx SINE Alu 0 312 1 402 351 116 36 chr2 241151320 241151719 -12104864 + L1MC4a LINE L1 4877 5342 -804 2025 101 4 0 chr2 241151743 241152050 -12104533 - AluSx SINE Alu 0 314 7 2242 99 0 0 chr2 241152107 241152401 -12104182 - AluSp SINE Alu -19 294 1 705 322 113 20 chr2 241152557 241152948 -12103635 - MLT1H LTR MaLR -16 533 107 1161 292 120 54 chr2 241153249 241154531 -12102052 - L1ME2 LINE L1 -215 5949 4753 2202 97 17 0 chr2 241154531 241154831 -12101752 - AluY SINE Alu -6 305 1 1161 292 120 54 chr2 241154831 241155158 -12101425 - L1ME2 LINE L1 -1411 4753 4449 2247 112 0 0 chr2 241155158 241155463 -12101120 - AluSx SINE Alu -7 305 1 1161 292 120 54 chr2 241155463 241155828 -12100755 - L1ME2 LINE L1 -1715 4449 3841 367 244 11 33 chr2 241155839 241155929 -12100654 - L1 LINE L1 -2364 3782 3695 362 301 138 21 chr2 241155983 241156222 -12100361 + L1MC4a LINE L1 5639 5905 -1903 343 286 0 0 chr2 241157015 241157092 -12099491 + MIR3 SINE MIR 111 187 -21 192 156 16 31 chr2 241157632 241157696 -12098887 + G-rich Low_complexity Low_complexity 1 63 0 6498 126 41 47 chr2 241158119 241158715 -12097868 + Tigger3b DNA MER2_type 1 599 -2429 2061 95 3 3 chr2 241158715 241158999 -12097584 + AluSx SINE Alu 24 307 -5 6498 126 41 47 chr2 241158999 241159629 -12096954 + Tigger3b DNA MER2_type 599 1219 -12 309 309 49 37 chr2 241159625 241159707 -12096876 + LTR67 LTR ERVL 99 178 -379 * 1434 165 95 48 chr2 241159707 241160065 -12096518 - THE1C LTR MaLR 0 375 1 309 309 49 37 chr2 241160065 241160144 -12096439 + LTR67 LTR ERVL 178 262 -295 306 228 43 11 chr2 241160240 241160332 -12096251 + LTR67 LTR ERVL 439 533 -24 1812 150 78 22 chr2 241160794 241161153 -12095430 - MSTB1 LTR MaLR 0 432 54 1480 164 51 27 chr2 241161619 241161912 -12094671 + AluJb SINE Alu 6 305 -7 238 256 51 26 chr2 241162491 241162569 -12094014 + MIR SINE MIR 9 88 -174 931 282 112 37 chr2 241162571 241162632 -12093951 - MLT1G1 LTR MaLR -1 548 493 2221 102 0 3 chr2 241162632 241162935 -12093648 + AluSg SINE Alu 1 302 -8 931 282 112 37 chr2 241162935 241163383 -12093200 - MLT1G1 LTR MaLR -56 493 1 421 240 30 0 chr2 241163390 241163490 -12093093 + MIR SINE MIR 92 194 -68 237 65 0 0 chr2 241164080 241164111 -12092472 + (CCCCAG)n Simple_repeat Simple_repeat 2 32 0 334 229 101 9 chr2 241165232 241165341 -12091242 - L2 LINE L2 -2 3270 3152 211 365 54 14 chr2 241165469 241165617 -12090966 - L2 LINE L2 -39 3233 3080 2034 93 4 4 chr2 241165697 241166013 -12090570 + AluSg1 SINE Alu 1 316 0 301 258 45 11 chr2 241167429 241167518 -12089065 + MLT1K LTR MaLR 137 228 -360 381 276 82 0 chr2 241167919 241168017 -12088566 - MER81 DNA DNA -7 107 2 1459 173 87 0 chr2 241168065 241168227 -12088356 - AluJb SINE Alu -11 301 154 210 37 0 0 chr2 241168227 241168254 -12088329 + (TTA)n Simple_repeat Simple_repeat 1 27 0 1459 173 87 0 chr2 241168254 241168368 -12088215 - AluJb SINE Alu -158 154 1 402 253 50 0 chr2 241168455 241168554 -12088029 - L2 LINE L2 -19 3253 3150 540 241 64 21 chr2 241168571 241168712 -12087871 - MER58B DNA MER1_type -16 325 179 248 153 0 85 chr2 241169203 241169262 -12087321 - L1MB7 LINE L1 -65 6119 6066 307 310 0 0 chr2 241170001 241170088 -12086495 - LTR67 LTR ERVL -10 547 461 2037 136 0 3 chr2 241172348 241172658 -12083925 + AluSx SINE Alu 1 309 -3 1673 244 75 15 chr2 241173561 241174040 -12082543 + Charlie4a DNA MER1_type 1 508 0 1862 167 3 3 chr2 241174044 241174355 -12082228 + AluJo SINE Alu 2 312 0 1458 219 71 23 chr2 241174858 241175209 -12081374 + MLT1A2 LTR MaLR 3 370 -4 1771 134 3 25 chr2 241377905 241378217 -11878366 - AluJb SINE Alu 0 310 5 1910 123 0 11 chr2 241378335 241378661 -11877922 - AluSx SINE Alu 0 324 2 865 223 201 33 chr2 241378727 241379121 -11877462 - L1MC4 LINE L1 -113 7929 7470 1464 169 4 4 chr2 241379131 241379373 -11877210 - MER44D DNA MER2_type -30 575 462 191 311 151 8 chr2 241380031 241380150 -11876433 - L2 LINE L2 -1 3271 3136 186 378 81 0 chr2 241380409 241380520 -11876063 - L2 LINE L2 -9 3263 3144 294 186 157 0 chr2 241380822 241380892 -11875691 - MER53 DNA DNA -4 185 105 229 214 157 0 chr2 241380830 241380900 -11875683 + MER53 DNA DNA 23 103 -86 * 198 230 24 167 chr2 241380961 241381028 -11875555 - MIR SINE MIR -24 238 196 2055 107 10 0 chr2 241381028 241381319 -11875264 + AluSx SINE Alu 1 294 -18 198 230 24 167 chr2 241381319 241381377 -11875206 - MIR SINE MIR -66 196 131 1105 193 7 121 chr2 241381377 241381729 -11874854 + MER92C LTR ERV1 1 308 -246 214 325 77 8 chr2 241381742 241381859 -11874724 - MIR SINE MIR -128 134 10 552 230 43 7 chr2 241381976 241382115 -11874468 + MLT1K LTR MaLR 125 268 -320 1624 171 0 4 chr2 241382327 241382601 -11873982 - AluJb SINE Alu -16 296 24 754 145 7 62 chr2 241382655 241382800 -11873783 + FLAM_C SINE Alu 7 143 0 382 155 0 0 chr2 241382813 241382871 -11873712 + MLT1K LTR MaLR 531 588 0 2940 219 153 9 chr2 241382901 241382946 -11873637 - MER21B LTR ERV1 -1 862 825 1746 146 3 23 chr2 241382946 241383247 -11873336 - AluJo SINE Alu -17 295 1 2940 219 153 9 chr2 241383247 241383723 -11872860 - MER21B LTR ERV1 -38 825 201 2234 73 3 3 chr2 241383723 241384033 -11872550 - AluSp SINE Alu 0 310 1 2940 219 153 9 chr2 241384033 241384246 -11872337 - MER21B LTR ERV1 -662 201 20 442 213 0 0 chr2 241384269 241384344 -11872239 - MER21B LTR ERV1 -776 87 13 2210 104 0 9 chr2 241384353 241384669 -11871914 - AluSq SINE Alu 0 313 1 276 218 46 23 chr2 241385281 241385368 -11871215 - L1MC5 LINE L1 -38 7923 7835 2352 65 3 3 chr2 241386487 241386794 -11869789 - AluY SINE Alu -4 307 1 1802 113 0 4 chr2 241386975 241387232 -11869351 - AluSg SINE Alu -12 298 43 333 232 32 97 chr2 241388124 241388309 -11868274 - MLT1K LTR MaLR -28 560 388 183 80 0 0 chr2 241388647 241388672 -11867911 + (TCCC)n Simple_repeat Simple_repeat 3 27 0 2126 104 13 0 chr2 241390030 241390338 -11866245 - AluSx SINE Alu 0 312 1 701 246 30 18 chr2 241390373 241390540 -11866043 + MLT1J LTR MaLR 144 312 -199 669 267 23 6 chr2 241390569 241390745 -11865838 - MLT1C LTR MaLR -2 465 287 608 179 106 0 chr2 241390753 241390876 -11865707 - MLT1C LTR MaLR -328 139 4 2251 80 35 95 chr2 241391047 241391102 -11865481 + L1MA1 LINE L1 5893 5950 -352 2090 110 0 0 chr2 241391102 241391392 -11865191 + AluJb SINE Alu 1 290 -22 2251 80 35 95 chr2 241391392 241391736 -11864847 + L1MA1 LINE L1 5950 6268 -34 615 217 94 17 chr2 241393285 241393465 -11863118 - MER20B DNA MER1_type 0 783 590 1401 128 0 0 chr2 241393476 241393679 -11862904 - AluJb SINE Alu -25 287 85 213 39 0 0 chr2 241393689 241393715 -11862868 + (TA)n Simple_repeat Simple_repeat 1 26 0 378 274 9 19 chr2 241393841 241393947 -11862636 - MER20B DNA MER1_type -308 475 371 268 279 52 22 chr2 241393975 241394111 -11862472 - MER20B DNA MER1_type -639 144 5 2044 136 24 75 chr2 241394482 241394807 -11861776 - MLT1B LTR MaLR 0 390 89 1929 151 0 10 chr2 241394807 241395118 -11861465 - AluJb SINE Alu 0 312 5 2044 136 24 75 chr2 241395118 241395203 -11861380 - MLT1B LTR MaLR -301 89 1 291 239 152 65 chr2 241395230 241395414 -11861169 - MLT1K LTR MaLR -14 574 375 440 104 21 21 chr2 241395459 241395555 -11861028 + (TAGA)n Simple_repeat Simple_repeat 2 97 0 433 170 27 107 chr2 241395578 241395690 -11860893 - MLT1K LTR MaLR -307 281 179 2226 102 3 0 chr2 241396777 241397081 -11859502 - AluSx SINE Alu -7 305 1 277 333 0 20 chr2 241397494 241397593 -11858990 + MER5A DNA MER1_type 7 103 -86 921 94 0 43 chr2 241397625 241397763 -11858820 + FLAM_C SINE Alu 2 133 0 247 310 254 20 chr2 241397801 241397998 -11858585 + MIR SINE MIR 20 262 0 622 251 67 28 chr2 241398003 241398182 -11858401 - L2 LINE L2 -9 3304 3119 2250 72 0 7 chr2 241398777 241399069 -11857514 - AluSc SINE Alu -19 290 1 25 0 0 0 chr2 241399073 241399098 -11857485 + AT_rich Low_complexity Low_complexity 1 25 0 2062 115 3 25 chr2 241399489 241399663 -11856920 - AluSx SINE Alu -4 308 143 2101 117 0 3 chr2 241399663 241399971 -11856612 - AluSc SINE Alu -2 307 1 2062 115 3 25 chr2 241399971 241400110 -11856473 - AluSx SINE Alu -169 143 2 1996 100 14 14 chr2 241400112 241400403 -11856180 - AluSx SINE Alu -21 291 1 222 258 135 22 chr2 241400481 241400570 -11856013 + MIR SINE MIR 149 247 -15 445 263 130 72 chr2 241401189 241401563 -11855020 - L2 LINE L2 -165 3107 2756 1584 164 16 36 chr2 241401563 241401728 -11854855 - AluJo SINE Alu -13 299 132 198 0 0 0 chr2 241401728 241401750 -11854833 + (TG)n Simple_repeat Simple_repeat 2 23 0 1584 164 16 36 chr2 241401750 241401777 -11854806 - AluJo SINE Alu -180 132 106 324 0 0 0 chr2 241401777 241401813 -11854770 + (TG)n Simple_repeat Simple_repeat 2 37 0 1584 164 16 36 chr2 241401813 241401924 -11854659 - AluJo SINE Alu -206 106 1 445 263 130 72 chr2 241401924 241401997 -11854586 - L2 LINE L2 -516 2756 2629 1452 172 23 11 chr2 241402248 241402510 -11854073 + AluSx SINE Alu 1 265 -47 1849 117 46 11 chr2 241402731 241403012 -11853571 - AluSc SINE Alu -18 291 1 2162 107 3 0 chr2 241403369 241403667 -11852916 + AluSp SINE Alu 1 299 -14 225 247 0 25 chr2 241404526 241404607 -11851976 + L1ME2 LINE L1 6086 6164 0 396 164 86 0 chr2 241404834 241404912 -11851671 + FLAM_A SINE Alu 38 94 -39 1120 152 0 61 chr2 241404912 241405078 -11851505 - AluJb SINE Alu -13 299 149 1620 173 3 7 chr2 241405078 241405373 -11851210 - AluJb SINE Alu -18 294 1 1120 152 0 61 chr2 241405373 241405436 -11851147 - AluJb SINE Alu -163 149 84 2237 85 3 3 chr2 241406599 241406905 -11849678 + AluSp SINE Alu 1 306 -7 253 258 76 15 chr2 241407286 241407352 -11849231 + MER5C DNA MER1_type 3 72 -252 208 214 24 0 chr2 241407470 241407512 -11849071 - MER5C DNA MER1_type -248 76 34 536 193 228 0 chr2 241408231 241408376 -11848207 + MER5A DNA MER1_type 9 186 -3 4066 174 64 29 chr2 241409651 241410347 -11846236 - L1MB7 LINE L1 -21 6661 5924 930 205 0 18 chr2 241410347 241410518 -11846065 - FAM SINE Alu -5 170 3 4066 174 64 29 chr2 241410518 241410755 -11845828 - L1MB7 LINE L1 -758 5924 5697 847 208 12 6 chr2 241410736 241410904 -11845679 - L1MB7 LINE L1 -5612 930 762 * 726 239 99 0 chr2 241411354 241411555 -11845028 - MIR SINE MIR -41 221 1 545 328 131 0 chr2 241411963 241412192 -11844391 - MIR SINE MIR -1 261 3 22 0 0 0 chr2 241412584 241412606 -11843977 + AT_rich Low_complexity Low_complexity 1 22 0 214 311 0 92 chr2 241412849 241412968 -11843615 + L2 LINE L2 2949 3056 -216 230 283 0 0 chr2 241413171 241413224 -11843359 + CT-rich Low_complexity Low_complexity 5 57 0 576 29 0 0 chr2 241413359 241413429 -11843154 + (TA)n Simple_repeat Simple_repeat 1 70 0 517 279 68 57 chr2 241414085 241414468 -11842115 + L1MC4a LINE L1 5524 5910 -1898 2047 66 0 15 chr2 241415324 241415597 -11840986 - AluY SINE Alu -1 310 42 1170 145 0 11 chr2 241415597 241415783 -11840800 - AluSg/x SINE Alu 0 310 127 190 383 0 0 chr2 241416497 241416557 -11840026 + L2 LINE L2 2581 2640 -674 1533 146 6 95 chr2 241417189 241417525 -11839058 - AluJb SINE Alu -4 308 3 22 0 0 0 chr2 241417926 241417948 -11838635 + AT_rich Low_complexity Low_complexity 1 22 0 317 261 54 11 chr2 241418124 241418216 -11838367 + MIR3 SINE MIR 64 159 -49 2134 123 30 15 chr2 241418373 241418705 -11837878 + MER1B DNA MER1_type 1 337 0 448 236 24 55 chr2 241418828 241418955 -11837628 - MER102b DNA MER1_type -1 340 218 248 231 0 19 chr2 241418997 241419049 -11837534 - MER102b DNA MER1_type -83 258 208 1972 143 3 0 chr2 241420125 241420425 -11836158 - AluSx SINE Alu -11 301 1 990 222 13 0 chr2 241420702 241420927 -11835656 + AluJo SINE Alu 75 302 -10 1986 97 0 8 chr2 241420975 241421243 -11835340 - AluSx SINE Alu -46 266 1 2259 98 3 0 chr2 241421255 241421561 -11835022 - AluSp SINE Alu -6 307 1 26 74 0 0 chr2 241422448 241422502 -11834081 + AT_rich Low_complexity Low_complexity 1 54 0 407 199 118 52 chr2 241422825 241422961 -11833622 + MIR SINE MIR 57 201 -61 2174 99 0 13 chr2 241423277 241423590 -11832993 + AluSq SINE Alu 1 309 -4 241 356 44 81 chr2 241424016 241424176 -11832407 - MIR3 SINE MIR -18 190 37 708 234 138 46 chr2 241424628 241424932 -11831651 - MER46C DNA MER2_type -3 335 4 239 242 30 0 chr2 241424932 241424998 -11831585 - L1MC4 LINE L1 -1361 6681 6614 1959 116 10 10 chr2 241425028 241425329 -11831254 - AluSg SINE Alu -9 301 1 534 176 0 0 chr2 241425904 241425995 -11830588 - FLAM_A SINE Alu -8 134 44 1807 156 7 17 chr2 241427879 241428180 -11828403 - AluJb SINE Alu -14 298 1 502 210 50 10 chr2 241429216 241429316 -11827267 + Tigger3(Golem) DNA MER2_type 2 105 -2924 * 2721 129 219 11 chr2 241429310 241429468 -11827115 + Tigger3(Golem) DNA MER2_type 2278 2402 -627 2200 114 3 3 chr2 241429468 241429776 -11826807 - AluSq SINE Alu -2 311 4 2721 129 219 11 chr2 241429776 241430239 -11826344 + Tigger3(Golem) DNA MER2_type 2402 3028 -1 418 285 122 47 chr2 241430441 241430655 -11825928 - MIR SINE MIR -7 255 26 1017 170 119 92 chr2 241430677 241430812 -11825771 + AluSx SINE Alu 1 131 -171 1938 116 0 81 chr2 241430812 241431147 -11825436 + AluSq SINE Alu 1 308 -5 1017 170 119 92 chr2 241431147 241431305 -11825278 + AluSx SINE Alu 131 302 0 2275 75 0 0 chr2 241431862 241432141 -11824442 + AluSg SINE Alu 1 279 -31 540 0 0 0 chr2 241432142 241432202 -11824381 + (CAAAC)n Simple_repeat Simple_repeat 2 61 0 275 145 26 40 chr2 241433163 241433207 -11823376 + (TAAA)n Simple_repeat Simple_repeat 2 46 -30 2376 100 0 0 chr2 241433207 241433517 -11823066 + AluSx SINE Alu 1 310 -2 275 145 26 40 chr2 241433517 241433548 -11823035 + (TAAA)n Simple_repeat Simple_repeat 46 76 0 326 229 238 0 chr2 241433652 241433757 -11822826 - L2 LINE L2 -70 3243 3114 1051 161 62 43 chr2 241433757 241433968 -11822615 + AluJo SINE Alu 87 301 -11 1988 113 31 3 chr2 241434070 241434363 -11822220 - AluSq SINE Alu -11 302 2 1033 122 0 0 chr2 241434364 241434503 -11822080 - AluSq/x SINE Alu -174 139 1 2016 138 0 0 chr2 241434503 241434794 -11821789 - AluSq SINE Alu -22 291 1 2257 109 0 7 chr2 241434874 241435176 -11821407 - AluSg SINE Alu -10 300 1 219 167 0 0 chr2 241435789 241435831 -11820752 + T-rich Low_complexity Low_complexity 1 42 0 1055 139 0 0 chr2 241435843 241435994 -11820589 + AluJo SINE Alu 1 151 -161 359 164 82 0 chr2 241435994 241436067 -11820516 + Alu SINE Alu 222 300 0 861 101 0 0 chr2 241436086 241436205 -11820378 + AluSq/x SINE Alu 1 119 -194 269 200 0 0 chr2 241436205 241436260 -11820323 + Alu SINE Alu 246 300 0 788 200 15 60 chr2 241437296 241437496 -11819087 + L1ME3A LINE L1 5973 6163 -7 2100 115 43 11 chr2 241437504 241437853 -11818730 + L1PA16 LINE L1 5806 6165 -1 2040 130 10 0 chr2 241437978 241438278 -11818305 + AluSx SINE Alu 4 306 -6 503 100 65 12 chr2 241438293 241438463 -11818120 + (TA)n Simple_repeat Simple_repeat 2 180 0 216 321 97 38 chr2 241438540 241438823 -11817760 - L2 LINE L2 -218 3054 2753 482 290 35 0 chr2 241438935 241439080 -11817503 + Charlie8 DNA MER1_type 7 156 -2261 22 35 0 0 chr2 241439255 241439284 -11817299 + AT_rich Low_complexity Low_complexity 1 29 0 290 370 0 29 chr2 241439611 241439725 -11816858 + MIR3 SINE MIR 5 114 -102 364 295 59 62 chr2 241439861 241440036 -11816547 + MIR3 SINE MIR 19 194 -14 22 0 0 0 chr2 241440125 241440147 -11816436 + AT_rich Low_complexity Low_complexity 1 22 0 710 216 12 42 chr2 241441758 241441925 -11814658 - U1 snRNA snRNA 0 165 4 917 114 0 0 chr2 241442068 241442191 -11814392 + AluJb SINE Alu 64 186 -126 447 297 68 8 chr2 241442628 241442746 -11813837 + MIR SINE MIR 17 141 -67 2866 7 0 0 chr2 241443598 241443908 -11812675 - AluYa5 SINE Alu 0 311 2 769 217 176 28 chr2 241444027 241444345 -11812238 + L1MC5 LINE L1 7131 7495 -466 1547 174 47 14 chr2 241444628 241444925 -11811658 + AluJo SINE Alu 1 306 0 1696 120 8 4 chr2 241445281 241445531 -11811052 + AluSx SINE Alu 45 295 -17 283 297 124 11 chr2 241446478 241446663 -11809920 + L1M4 LINE L1 59 264 -6278 310 409 101 0 chr2 241447053 241447202 -11809381 + L2 LINE L2 3091 3254 -18 2291 104 3 0 chr2 241447740 241448047 -11808536 + AluSx SINE Alu 5 312 0 201 158 0 0 chr2 241448095 241448133 -11808450 + (TTG)n Simple_repeat Simple_repeat 2 39 0 246 156 0 0 chr2 241448328 241448373 -11808210 + (TG)n Simple_repeat Simple_repeat 2 46 0 31 0 0 0 chr2 241448477 241448508 -11808075 + AT_rich Low_complexity Low_complexity 1 31 0 29 28 0 0 chr2 241448721 241448757 -11807826 + AT_rich Low_complexity Low_complexity 1 36 0 1425 143 12 128 chr2 241448933 241449269 -11807314 - AluJb SINE Alu -5 297 1 691 215 0 15 chr2 241454008 241454143 -11802440 - FLAM_A SINE Alu 0 133 1 1849 103 12 0 chr2 241455138 241455390 -11801193 + AluSx SINE Alu 1 255 -57 2206 120 3 0 chr2 241455544 241455844 -11800739 - AluSx SINE Alu -11 301 1 216 269 140 21 chr2 241455912 241456005 -11800578 + MIR SINE MIR 3 106 -156 945 225 52 40 chr2 241457187 241457436 -11799147 - MIR SINE MIR 0 262 11 492 233 164 25 chr2 241459495 241459654 -11796929 - MER5A DNA MER1_type 0 189 9 240 182 200 0 chr2 241459744 241459799 -11796784 + MIR3 SINE MIR 119 184 -24 203 293 0 61 chr2 241461001 241461083 -11795500 - MIR SINE MIR -114 94 18 24 0 0 0 chr2 241461135 241461159 -11795424 + AT_rich Low_complexity Low_complexity 1 24 0 2011 146 3 0 chr2 241462243 241462545 -11794038 - AluJb SINE Alu -3 309 7 193 292 156 10 chr2 241463444 241463540 -11793043 - L2 LINE L2 0 3313 3204 984 203 31 22 chr2 241464501 241464723 -11791860 - MER58A DNA MER1_type 0 224 1 2011 130 0 10 chr2 241465104 241465396 -11791187 - AluSx SINE Alu -21 291 3 266 291 0 47 chr2 241467805 241467891 -11788692 + MIR SINE MIR 56 137 -125 1946 151 3 0 chr2 241468797 241469096 -11787487 - AluSx SINE Alu -12 300 1 203 302 0 0 chr2 241470745 241470808 -11785775 + MIR SINE MIR 78 140 -122 29 28 0 0 chr2 241470924 241470960 -11785623 + AT_rich Low_complexity Low_complexity 1 36 0 344 392 130 21 chr2 241471675 241472282 -11784301 + L3 LINE CR1 1 673 -904 354 227 0 0 chr2 241472603 241472669 -11783914 - MER8 DNA MER2_type -4 235 170 * 2563 135 44 25 chr2 241472667 241473098 -11783485 + Tigger2 DNA MER2_type 2280 2718 0 1167 136 16 0 chr2 241473123 241473307 -11783276 - Tigger1 DNA MER2_type -5 2413 2227 1065 204 53 45 chr2 241473324 241473589 -11782994 + AluJo SINE Alu 11 277 -35 1937 169 20 3 chr2 241473619 241473967 -11782616 - Tigger1 DNA MER2_type -194 2224 1871 2038 180 62 12 chr2 241474010 241474476 -11782107 + LTR22 LTR ERVK 1 458 0 1919 61 53 4 chr2 241474476 241474739 -11781844 + HERVK22 LTR ERVK 1 276 -6561 1735 228 91 31 chr2 241474739 241475256 -11781327 + LTR10A LTR ERV1 1 548 -61 1017 196 48 55 chr2 241475265 241475556 -11781027 + LTR10A-int LTR ERV1 1 289 -6360 4818 214 40 19 chr2 241475626 241476757 -11779826 + LTR10A-int LTR ERV1 487 1587 -5923 2680 92 18 40 chr2 241476800 241477329 -11779254 + HERVI LTR ERV1 703 1337 -5559 * 4596 234 20 15 chr2 241477327 241478382 -11778201 + HERVI LTR ERV1 6725 7784 -1 1851 151 105 31 chr2 241478426 241478859 -11777724 + LTR10A LTR ERV1 97 609 0 3681 112 0 0 chr2 241478859 241479359 -11777224 + HERVK22 LTR ERVK 273 772 -6065 22397 78 9 14 chr2 241479362 241482314 -11774269 + HERVK22 LTR ERVK 2314 5250 -1587 12566 94 7 2 chr2 241482312 241483968 -11772615 + HERVK22 LTR ERVK 5173 6836 -1 * 2383 165 109 11 chr2 241483972 241484432 -11772151 + LTR22 LTR ERVK 1 505 -4 12220 119 27 14 chr2 241484472 241484850 -11771733 - Tigger1 DNA MER2_type -533 1885 1513 2153 108 3 53 chr2 241484850 241485173 -11771410 - AluSx SINE Alu -5 307 1 12220 119 27 14 chr2 241485173 241485438 -11771145 - Tigger1 DNA MER2_type -905 1513 1253 3171 85 62 9 chr2 241485438 241485819 -11770764 + MLT2A1 LTR ERVL 1 408 -36 180 0 0 0 chr2 241485819 241485839 -11770744 + (TA)n Simple_repeat Simple_repeat 2 21 0 3171 85 62 9 chr2 241485839 241485879 -11770704 + MLT2A1 LTR ERVL 408 444 0 12220 119 27 14 chr2 241485879 241487095 -11769488 - Tigger1 DNA MER2_type -1165 1253 1 264 268 0 0 chr2 241487164 241487235 -11769348 + (CTA)n Simple_repeat Simple_repeat 3 73 0 867 258 14 0 chr2 241487241 241487450 -11769133 - MIR SINE MIR -21 241 30 2329 87 0 7 chr2 241487455 241487753 -11768830 - AluSg SINE Alu -14 296 1 282 106 0 21 chr2 241488423 241488470 -11768113 + L1MA9 LINE L1 6229 6274 -38 929 130 0 8 chr2 241488508 241488639 -11767944 - FLAM_C SINE Alu -3 130 1 1999 151 0 0 chr2 241488755 241489059 -11767524 - AluSx SINE Alu -8 304 1 1905 156 0 32 chr2 241489089 241489403 -11767180 + AluJo SINE Alu 1 304 -8 32 0 0 0 chr2 241489464 241489496 -11767087 + AT_rich Low_complexity Low_complexity 1 32 0 573 223 239 0 chr2 241489792 241489922 -11766661 - FRAM SINE Alu -2 164 4 2030 131 0 10 chr2 241491077 241491367 -11765216 - AluSx SINE Alu -25 287 1 2163 109 0 3 chr2 241492719 241493012 -11763571 - AluSq SINE Alu -21 292 1 1773 159 3 10 chr2 241493069 241493359 -11763224 + AluJo SINE Alu 1 288 -24 251 325 104 9 chr2 241493380 241493592 -11762991 - L2 LINE L2 -1471 1843 1612 283 233 153 98 chr2 241493680 241493843 -11762740 + MLT1K LTR MaLR 2 173 -415 216 0 0 0 chr2 241494105 241494129 -11762454 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2425 75 0 7 chr2 241494267 241494573 -11762010 - AluSq SINE Alu -9 304 1 330 230 58 11 chr2 241494796 241494883 -11761700 + MIR3 SINE MIR 108 198 -10 25 31 0 0 chr2 241496105 241496137 -11760446 + AT_rich Low_complexity Low_complexity 1 32 0 2325 107 10 0 chr2 241496339 241496648 -11759935 + AluSx SINE Alu 1 312 0 2271 112 0 0 chr2 241497145 241497448 -11759135 - AluSx SINE Alu -9 303 1 23 68 0 0 chr2 241497693 241497737 -11758846 + AT_rich Low_complexity Low_complexity 1 44 0 442 141 13 13 chr2 241497887 241497965 -11758618 - MER51A LTR ERV1 -87 547 470 26 0 0 0 chr2 241498607 241498633 -11757950 + AT_rich Low_complexity Low_complexity 1 26 0 1980 128 46 0 chr2 241498768 241499049 -11757534 - AluSx SINE Alu -18 294 1 1818 163 3 13 chr2 241499551 241499852 -11756731 + AluJb SINE Alu 1 298 -14 1107 168 0 16 chr2 241500388 241500573 -11756010 + AluJo SINE Alu 87 268 -44 2062 130 0 7 chr2 241501028 241501328 -11755255 + AluSx SINE Alu 1 298 -14 1617 209 104 73 chr2 241501333 241502046 -11754537 + L1M4 LINE L1 4061 4795 -1351 2559 131 13 0 chr2 241502073 241502446 -11754137 + Tigger1 DNA MER2_type 93 470 -1948 24 77 0 0 chr2 241504111 241504163 -11752420 + AT_rich Low_complexity Low_complexity 1 52 0 232 178 78 89 chr2 241505080 241505170 -11751413 + MIR SINE MIR 120 208 -54 236 353 0 0 chr2 241505177 241505262 -11751321 + (TAATG)n Simple_repeat Simple_repeat 2 86 0 559 271 51 14 chr2 241506018 241506232 -11750351 - MER112 DNA MER1_type -7 253 32 209 263 60 60 chr2 241506232 241506365 -11750218 + L2 LINE L2 3112 3244 -69 468 228 0 11 chr2 241506365 241506457 -11750126 - Tigger7 DNA MER2_type -1 2486 2396 * 3025 176 31 8 chr2 241506449 241506960 -11749623 - Tigger7 DNA MER2_type -1959 528 6 394 191 0 0 chr2 241506967 241507035 -11749548 + L2 LINE L2 3245 3312 -1 456 259 61 30 chr2 241507136 241507267 -11749316 - L2 LINE L2 0 3272 3138 2228 134 0 0 chr2 241507477 241507784 -11748799 + AluSx SINE Alu 1 307 -5 357 293 90 0 chr2 241508619 241508752 -11747831 - MARNA DNA Mariner -15 571 427 675 207 0 0 chr2 241508756 241508872 -11747711 + FLAM_A SINE Alu 1 116 -17 244 256 39 26 chr2 241509157 241509235 -11747348 + MARNA DNA Mariner 385 463 -123 1735 154 92 7 chr2 241509235 241509527 -11747056 - MER7A DNA MER2_type 0 346 32 2546 35 6 22 chr2 241509835 241510148 -11746435 + AluY SINE Alu 1 308 -3 1788 161 28 0 chr2 241510481 241510772 -11745811 + AluSx SINE Alu 10 308 -4 814 162 0 44 chr2 241511469 241511605 -11744978 + FLAM_C SINE Alu 1 130 -3 309 333 167 5 chr2 241512256 241512460 -11744123 + MIR SINE MIR 20 256 -6 1850 169 3 25 chr2 241513569 241513883 -11742700 + AluJb SINE Alu 6 312 0 785 166 204 0 chr2 241514396 241514553 -11742030 + MER5A DNA MER1_type 1 189 0 508 236 71 46 chr2 241515606 241515886 -11740697 + HAL1 LINE L1 2221 2507 0 183 171 49 0 chr2 241515994 241516035 -11740548 + L2 LINE L2 3188 3230 -42 212 308 117 33 chr2 241516224 241516344 -11740239 - L3 LINE CR1 -6 1571 1442 707 304 152 21 chr2 241516478 241516800 -11739783 - L2 LINE L2 -169 3144 2865 1283 98 21 36 chr2 241516800 241516993 -11739590 + MER30B DNA MER1_type 1 190 0 707 304 152 21 chr2 241516993 241517170 -11739413 - L2 LINE L2 -448 2865 2575 371 281 244 12 chr2 241517234 241517480 -11739103 - L3 LINE CR1 -161 1416 1114 26 0 0 0 chr2 241519594 241519620 -11736963 + AT_rich Low_complexity Low_complexity 1 26 0 2203 101 7 3 chr2 241519722 241520018 -11736565 - AluSc SINE Alu -12 297 1 2340 77 10 7 chr2 241520229 241520528 -11736055 + AluSx SINE Alu 1 300 -12 615 198 148 0 chr2 241520546 241520708 -11735875 - Charlie8 DNA MER1_type -2173 244 59 197 280 100 10 chr2 241520936 241521036 -11735547 + L2 LINE L2 2652 2760 -554 450 322 115 16 chr2 241521705 241522009 -11734574 + L2 LINE L2 2933 3266 -6 2282 91 3 0 chr2 241523154 241523451 -11733132 - AluSx SINE Alu -14 298 1 687 140 44 0 chr2 241523468 241523582 -11733001 + MER3 DNA MER1_type 50 168 -41 1424 180 113 3 chr2 241523593 241523937 -11732646 + MER3 DNA MER1_type 2243 2624 0 897 124 8 0 chr2 241525400 241525521 -11731062 + AluJo SINE Alu 13 134 -178 234 200 0 46 chr2 241526365 241526430 -11730153 - Charlie8 DNA MER1_type -2273 144 83 195 218 39 90 chr2 241526739 241526817 -11729766 - MIR SINE MIR -78 184 111 354 223 213 48 chr2 241527735 241527923 -11728660 - MER20B DNA MER1_type 0 219 1 478 169 0 0 chr2 241528662 241528751 -11727832 + L1ME4a LINE L1 5582 5670 -451 638 255 82 17 chr2 241528757 241528988 -11727595 + MLT1L LTR MaLR 359 604 -11 262 205 53 0 chr2 241528995 241529069 -11727514 + L1ME4a LINE L1 5743 5825 -296 432 0 0 0 chr2 241529089 241529137 -11727446 + (CA)n Simple_repeat Simple_repeat 2 49 0 853 169 0 0 chr2 241529146 241529288 -11727295 + L1MD2 LINE L1 6161 6302 -57 689 137 0 0 chr2 241529290 241529392 -11727191 - FLAM_C SINE Alu -15 128 27 280 179 0 0 chr2 241529392 241529448 -11727135 + L1MD2 LINE L1 6290 6345 -14 1446 170 6 89 chr2 241529531 241529611 -11726972 + Tigger3b DNA MER2_type 1 86 -2943 2519 62 3 7 chr2 241529611 241529918 -11726665 + AluY SINE Alu 1 306 -5 1446 170 6 89 chr2 241529918 241530150 -11726433 + Tigger3b DNA MER2_type 86 282 -2747 1984 86 0 4 chr2 241530150 241530405 -11726178 - AluSx SINE Alu -15 297 44 1446 170 6 89 chr2 241530405 241530450 -11726133 + Tigger3b DNA MER2_type 282 329 -2700 269 156 0 16 chr2 241530465 241530529 -11726054 + (TA)n Simple_repeat Simple_repeat 1 63 0 5350 108 22 35 chr2 241530529 241530898 -11725685 + Tigger3b DNA MER2_type 340 712 -2316 186 43 0 0 chr2 241530898 241530921 -11725662 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 755 214 14 0 chr2 241530921 241531066 -11725517 - FRAM SINE Alu -19 147 1 5350 108 22 35 chr2 241531066 241531599 -11724984 + Tigger3b DNA MER2_type 710 1231 0 417 224 40 72 chr2 241531923 241532048 -11724535 + L1ME4a LINE L1 5962 6082 -39 424 219 102 70 chr2 241532053 241532368 -11724215 + MLT1E LTR MaLR 3 371 -255 2143 124 3 0 chr2 241532400 241532705 -11723878 - AluSq SINE Alu 0 306 1 940 146 195 22 chr2 241532896 241533160 -11723423 + Tigger7 DNA MER2_type 3 2480 -7 227 147 0 0 chr2 241533891 241533925 -11722658 + MIR SINE MIR 222 255 -7 269 218 0 0 chr2 241534325 241534380 -11722203 - MIR SINE MIR -56 206 152 30 0 0 0 chr2 241534547 241534577 -11722006 + AT_rich Low_complexity Low_complexity 1 30 0 311 219 73 88 chr2 241535247 241535384 -11721199 - L2 LINE L2 -213 3059 2925 2156 127 3 0 chr2 241535389 241535680 -11720903 + AluSq SINE Alu 5 296 -17 2207 55 0 0 chr2 241536091 241536366 -11720217 - L1PA4 LINE L1 0 6155 5881 24 32 0 0 chr2 241537189 241537220 -11719363 + GC_rich Low_complexity Low_complexity 1 31 0 29 0 0 0 chr2 241537438 241537467 -11719116 + GC_rich Low_complexity Low_complexity 1 29 0 261 109 0 0 chr2 241537565 241537611 -11718972 + (CCG)n Simple_repeat Simple_repeat 2 47 0 39 38 0 0 chr2 241537615 241537668 -11718915 + GC_rich Low_complexity Low_complexity 1 53 0 28 91 0 0 chr2 241537865 241537942 -11718641 + GC_rich Low_complexity Low_complexity 1 77 0 23 0 0 0 chr2 241537979 241538002 -11718581 + GC_rich Low_complexity Low_complexity 1 23 0 267 219 27 41 chr2 241538148 241538221 -11718362 - L2 LINE L2 -1 3271 3200 495 183 131 33 chr2 241538625 241538778 -11717805 + MER3 DNA MER1_type 1 168 -41 2297 107 3 16 chr2 241539430 241539747 -11716836 + AluSp SINE Alu 1 313 0 288 295 70 97 chr2 241539843 241540070 -11716513 - MLT1J LTR MaLR -61 450 230 345 333 43 14 chr2 241540070 241540208 -11716375 + HAL1b LINE L1 404 545 -803 2156 128 10 0 chr2 241540282 241540580 -11716003 + AluSx SINE Alu 1 301 -11 21 0 0 0 chr2 241541061 241541082 -11715501 + AT_rich Low_complexity Low_complexity 1 21 0 1724 159 9 54 chr2 241541267 241541582 -11715001 + AluJb SINE Alu 6 306 -6 210 209 12 35 chr2 241541678 241541764 -11714819 + CT-rich Low_complexity Low_complexity 2 85 0 1018 79 0 7 chr2 241542182 241542322 -11714261 + MER85 DNA T2_type 1 139 0 1131 151 5 29 chr2 241543567 241543772 -11712811 + MER3 DNA MER1_type 10 209 0 355 254 48 79 chr2 241543605 241543794 -11712789 - MER3 DNA MER1_type 0 209 27 * 578 256 144 30 chr2 241543890 241544218 -11712365 + MLT1L LTR MaLR 1 394 -221 29 0 0 0 chr2 241544387 241544416 -11712167 + AT_rich Low_complexity Low_complexity 1 29 0 2239 113 0 0 chr2 241544606 241544898 -11711685 + AluSx SINE Alu 1 292 -20 326 217 0 0 chr2 241545009 241545078 -11711505 + L1ME3A LINE L1 6064 6132 -38 659 296 35 72 chr2 241545562 241545656 -11710927 - HERVL LTR ERVL -3318 2446 2350 192 40 0 0 chr2 241545656 241545681 -11710902 + (CA)n Simple_repeat Simple_repeat 1 25 0 659 296 35 72 chr2 241545681 241545934 -11710649 - HERVL LTR ERVL -3414 2350 2112 412 272 62 25 chr2 241545961 241546174 -11710409 - HERVL LTR ERVL -3685 1969 1780 301 376 8 0 chr2 241546343 241546460 -11710123 - LTR67 LTR ERVL -342 215 98 2294 96 0 0 chr2 241546669 241546974 -11709609 - AluSx SINE Alu 0 305 1 2003 209 51 118 chr2 241547417 241547905 -11708678 - MER21B LTR ERV1 -52 811 405 2077 157 7 0 chr2 241547905 241548205 -11708378 - AluSx SINE Alu -10 302 1 2003 209 51 118 chr2 241548205 241548583 -11708000 - MER21B LTR ERV1 -458 405 3 1903 152 0 0 chr2 241549360 241549643 -11706940 + AluSc SINE Alu 1 283 -26 2316 122 0 3 chr2 241549821 241550132 -11706451 - AluSx SINE Alu -2 310 1 251 212 12 94 chr2 241550555 241550640 -11705943 - L2 LINE L2 -8 3305 3228 351 300 95 21 chr2 241550707 241550950 -11705633 - L1ME4a LINE L1 -205 5916 5656 1949 129 11 0 chr2 241551175 241551454 -11705129 - AluSx SINE Alu -30 282 1 481 236 52 52 chr2 241551770 241552007 -11704576 + L1MEc LINE L1 2031 2270 -4126 2512 71 0 0 chr2 241552007 241552304 -11704279 - AluY SINE Alu -14 297 1 481 236 52 52 chr2 241552304 241552354 -11704229 + L1MEc LINE L1 2269 2318 -4078 567 183 10 132 chr2 241552384 241552581 -11704002 + L1MEc LINE L1 2776 2948 -3267 1050 142 0 0 chr2 241552589 241552744 -11703839 - AluJb SINE Alu 0 312 158 1667 155 17 21 chr2 241552815 241553106 -11703477 + AluJb SINE Alu 1 290 -22 1874 155 0 10 chr2 241553119 241553409 -11703174 + AluJo SINE Alu 1 287 -25 315 283 57 0 chr2 241553412 241553518 -11703065 + L1MEc LINE L1 2975 3086 -3129 565 249 66 30 chr2 241554108 241554305 -11702278 + MLT1H1 LTR MaLR 352 555 0 392 267 142 42 chr2 241554319 241554572 -11702011 - LTR16A LTR ERVL -193 257 1 645 130 0 0 chr2 241554830 241554922 -11701661 + AluSg/x SINE Alu 212 303 -9 2543 197 48 44 chr2 241554966 241555606 -11700977 - LTR48B LTR ERV1 -1 643 1 354 280 9 75 chr2 241555744 241555799 -11700784 + L1ME LINE L1 5676 5722 -399 2531 54 0 3 chr2 241555799 241556093 -11700490 + AluY SINE Alu 1 293 -18 354 280 9 75 chr2 241556093 241556144 -11700439 + L1ME LINE L1 5722 5775 -346 2495 77 0 10 chr2 241556154 241556465 -11700118 + AluY SINE Alu 1 308 -3 1946 95 4 19 chr2 241556478 241556740 -11699843 + AluSx SINE Alu 42 299 -13 490 229 143 67 chr2 241556801 241557116 -11699467 - LTR49 LTR ERV1 -14 581 243 2315 102 0 0 chr2 241557203 241557496 -11699087 + AluSx SINE Alu 5 297 -15 895 138 28 126 chr2 241557499 241557753 -11698830 - LTR49 LTR ERV1 -362 233 5 306 287 37 22 chr2 241558147 241558283 -11698300 + MLT1K LTR MaLR 449 586 -2 1608 156 53 53 chr2 241558717 241559018 -11697565 - AluSg SINE Alu -9 301 1 806 131 98 126 chr2 241560044 241560227 -11696356 + AluSq SINE Alu 4 181 -132 953 273 98 77 chr2 241560891 241561434 -11695149 - MER41C LTR ERV1 0 554 1 443 100 75 38 chr2 241561493 241561573 -11695010 + AluJ/FRAM SINE Alu 220 302 -10 1936 113 4 11 chr2 241561676 241561942 -11694641 + AluSp SINE Alu 43 306 -7 990 237 7 48 chr2 241561942 241562237 -11694346 + L1ME2 LINE L1 5730 6012 -152 914 229 79 32 chr2 241562266 241562545 -11694038 - L2 LINE L2 -1961 1353 1062 1902 106 102 0 chr2 241564021 241564295 -11692288 + AluSx SINE Alu 1 302 -10 1756 133 54 70 chr2 241564323 241564638 -11691945 - AluJb SINE Alu -2 310 1 3494 123 90 7 chr2 241564706 241565308 -11691275 + MER39B LTR ERV1 2 653 0 359 239 145 0 chr2 241565893 241566010 -11690573 - MER20B DNA MER1_type -604 179 46 475 346 23 9 chr2 241566221 241566438 -11690145 + MLT1K LTR MaLR 11 230 -358 368 267 86 63 chr2 241567164 241567385 -11689198 + LTR16C LTR ERVL 154 379 -112 1050 174 0 0 chr2 241567393 241567560 -11689023 - FRAM SINE Alu -9 167 1 2424 86 0 10 chr2 241568890 241569204 -11687379 - AluY SINE Alu 0 311 1 1314 198 6 107 chr2 241569204 241569542 -11687041 - AluSp SINE Alu -9 304 1 225 175 0 0 chr2 241569628 241569668 -11686915 + (ATG)n Simple_repeat Simple_repeat 3 42 0 269 182 0 15 chr2 241569738 241569804 -11686779 + (TGG)n Simple_repeat Simple_repeat 1 65 0 755 304 21 12 chr2 241569810 241570053 -11686530 - MIR SINE MIR -16 246 2 408 277 98 33 chr2 241570134 241570318 -11686265 - MIR SINE MIR -36 226 31 354 170 10 10 chr2 241570393 241570471 -11686112 - MIR SINE MIR -70 192 116 243 200 0 0 chr2 241570826 241570871 -11685712 - MIR SINE MIR -70 192 148 884 244 82 28 chr2 241570947 241571337 -11685246 + LTR16A1 LTR ERVL 32 442 -15 202 269 117 78 chr2 241571366 241571622 -11684961 - L2 LINE L2 -95 3177 2912 373 304 26 9 chr2 241572301 241572416 -11684167 - MIR SINE MIR -24 238 122 389 301 44 0 chr2 241574701 241574814 -11681769 - MIR SINE MIR -52 210 93 3560 148 53 56 chr2 241575295 241576026 -11680557 - L1MB7 LINE L1 0 6184 5456 520 289 102 22 chr2 241576676 241576901 -11679682 + MIR SINE MIR 14 256 -6 457 236 142 14 chr2 241576956 241577104 -11679479 - L3 LINE CR1 -72 1505 1339 242 108 27 0 chr2 241577122 241577159 -11679424 + MER53 DNA DNA 2 39 -150 * 439 137 53 11 chr2 241577144 241577239 -11679344 - MER53 DNA DNA -68 121 23 424 135 67 11 chr2 241577162 241577251 -11679332 + MER53 DNA DNA 96 189 0 * 2232 125 73 14 chr2 241577263 241577607 -11678976 - THE1B LTR MaLR 0 364 1 583 276 128 55 chr2 241577609 241577921 -11678662 - L3 LINE CR1 -311 1266 932 2139 53 38 0 chr2 241579526 241579790 -11676793 + AluY SINE Alu 17 290 -21 317 305 0 0 chr2 241579898 241579980 -11676603 - MIR SINE MIR -78 130 49 2208 81 3 14 chr2 241580072 241580368 -11676215 + AluSc SINE Alu 1 293 -16 942 157 73 11 chr2 241580702 241580880 -11675703 - MER20 DNA MER1_type 0 219 31 1695 120 28 77 chr2 241581264 241581590 -11674993 - AluSx SINE Alu -2 310 1 2208 87 0 16 chr2 241581856 241582166 -11674417 + AluSx SINE Alu 1 305 -7 259 272 87 23 chr2 241582743 241582916 -11673667 - MIR3 SINE MIR -21 187 4 250 260 146 10 chr2 241583097 241583193 -11673390 + MIR SINE MIR 154 262 0 25 31 0 0 chr2 241585108 241585140 -11671443 + AT_rich Low_complexity Low_complexity 1 32 0 1522 173 7 7 chr2 241585206 241585490 -11671093 + AluSx SINE Alu 4 287 -25 737 143 0 8 chr2 241585506 241585625 -11670958 - AluYa5 SINE Alu -57 254 137 412 42 0 0 chr2 241585638 241585686 -11670897 + (A)n Simple_repeat Simple_repeat 1 48 0 684 264 128 65 chr2 241586454 241586733 -11669850 - MLT1J LTR MaLR -106 344 64 406 275 114 18 chr2 241586852 241587019 -11669564 - MIR SINE MIR -43 219 37 190 206 16 95 chr2 241587831 241587894 -11668689 + L2 LINE L2 3214 3271 -1 * 432 251 206 6 chr2 241587877 241588052 -11668531 - L2 LINE L2 -1 3312 3103 1133 203 67 111 chr2 241588453 241588930 -11667653 + MLT2C2 LTR ERVL 7 462 -2 320 245 32 11 chr2 241590159 241590253 -11666330 + MLT1C LTR MaLR 1 96 -371 240 128 0 0 chr2 241590287 241590326 -11666257 + MLT1C LTR MaLR 69 107 -360 333 0 0 0 chr2 241590393 241590430 -11666153 + (TG)n Simple_repeat Simple_repeat 1 37 0 1808 137 0 18 chr2 241590433 241590718 -11665865 - AluJb SINE Alu -30 282 3 559 220 226 56 chr2 241590719 241591024 -11665559 + MLT1C LTR MaLR 103 459 -46 1325 188 46 68 chr2 241591275 241591498 -11665085 + MER2 DNA MER2_type 2 229 -115 2184 101 0 0 chr2 241591498 241591794 -11664789 - AluSc SINE Alu -13 296 1 1325 188 46 68 chr2 241591794 241591820 -11664763 + MER2 DNA MER2_type 229 254 -90 1508 162 35 28 chr2 241591820 241592104 -11664479 - AluJo SINE Alu -26 286 1 1325 188 46 68 chr2 241592104 241592204 -11664379 + MER2 DNA MER2_type 254 344 0 228 379 24 8 chr2 241592736 241592860 -11663723 + L2 LINE L2 2404 2529 -785 408 330 8 8 chr2 241592940 241593058 -11663525 + L2 LINE L2 3155 3272 0 1079 149 0 0 chr2 241593470 241593644 -11662939 - AluSg/x SINE Alu 0 310 137 1515 224 79 81 chr2 241593796 241594439 -11662144 - L1MC4 LINE L1 -1 8041 7400 1660 264 152 23 chr2 241595675 241596594 -11659989 - L1MC4a LINE L1 -648 7160 6123 1381 130 153 0 chr2 241596607 241596717 -11659866 + AluJo SINE Alu 12 104 -208 363 44 0 0 chr2 241596717 241596762 -11659821 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 1381 130 153 0 chr2 241596762 241596905 -11659678 + AluJo SINE Alu 104 304 -8 435 228 207 16 chr2 241596919 241597112 -11659471 - L1MC4a LINE L1 -1696 6112 5883 2405 198 82 14 chr2 241597267 241597854 -11658729 - LTR48B LTR ERV1 -14 630 4 2013 127 16 0 chr2 241598184 241598491 -11658092 - AluSx SINE Alu 0 312 1 2572 180 140 24 chr2 241598495 241598955 -11657628 - L1MB5 LINE L1 -36 6138 5586 2257 92 0 0 chr2 241598955 241599250 -11657333 - AluSg SINE Alu -15 295 1 2572 180 140 24 chr2 241599250 241599412 -11657171 - L1MB5 LINE L1 -588 5586 5444 1878 195 39 23 chr2 241599603 241599993 -11656590 + MSTD LTR MaLR 1 396 0 474 256 17 8 chr2 241601104 241601221 -11655362 - MER94 DNA DNA -16 118 1 3158 151 131 52 chr2 241601242 241601578 -11655005 - L1MB3 LINE L1 -2 6181 5873 2572 121 25 46 chr2 241601578 241601624 -11654959 - MSTA LTR MaLR 0 428 383 1810 151 3 43 chr2 241601624 241601770 -11654813 + AluJb SINE Alu 1 151 -161 2194 91 3 0 chr2 241601770 241602067 -11654516 + AluY SINE Alu 1 298 -13 1810 151 3 43 chr2 241602067 241602245 -11654338 + AluJb SINE Alu 151 312 0 2572 121 25 46 chr2 241602245 241602635 -11653948 - MSTA LTR MaLR -45 383 1 3158 151 131 52 chr2 241602635 241602840 -11653743 - L1MB3 LINE L1 -310 5873 5685 1837 134 0 38 chr2 241602840 241603028 -11653555 - AluSg SINE Alu -2 308 135 186 103 0 0 chr2 241603028 241603057 -11653526 + (TTAA)n Simple_repeat Simple_repeat 4 32 0 1837 134 0 38 chr2 241603057 241603188 -11653395 - AluSg SINE Alu -175 135 1 3158 151 131 52 chr2 241603188 241603372 -11653211 - L1MB3 LINE L1 -498 5685 5398 1386 172 8 34 chr2 241603372 241603634 -11652949 - AluJo SINE Alu -57 255 1 300 155 0 48 chr2 241603640 241603724 -11652859 - L1MB3 LINE L1 -820 5360 5281 413 158 0 39 chr2 241603824 241603939 -11652644 - L1MB5 LINE L1 -797 5349 5239 1944 141 0 0 chr2 241604013 241604334 -11652249 + AluJo SINE Alu 1 321 0 959 157 0 0 chr2 241604572 241604731 -11651852 - AluJb SINE Alu 0 312 154 2702 101 53 5 chr2 241605126 241605663 -11650920 - MER51A LTR ERV1 0 634 1 1620 173 14 0 chr2 241606173 241606468 -11650115 + AluJb SINE Alu 1 299 -13 1953 244 69 73 chr2 241606506 241607207 -11649376 - L1MC4a LINE L1 -1692 6534 5832 1634 183 0 10 chr2 241607207 241607508 -11649075 + AluJb SINE Alu 1 298 -14 258 32 0 0 chr2 241607508 241607539 -11649044 + (GGGGA)n Simple_repeat Simple_repeat 2 32 0 195 42 0 0 chr2 241607539 241607563 -11649020 + (GAAA)n Simple_repeat Simple_repeat 3 26 0 1953 244 69 73 chr2 241607563 241607695 -11648888 - L1MC4a LINE L1 -2391 5835 5702 2194 109 3 3 chr2 241607792 241608104 -11648479 + AluSx SINE Alu 1 312 0 3011 137 58 6 chr2 241608104 241608617 -11647966 + Tigger3(Golem) DNA MER2_type 2394 2933 -96 337 200 175 0 chr2 241608621 241608701 -11647882 + Tigger3(Golem) DNA MER2_type 2894 2987 -42 1464 223 43 36 chr2 241608702 241609120 -11647463 - L1MC4a LINE L1 -2003 4561 4141 1263 265 49 26 chr2 241609119 241609609 -11646974 - L1MC4a LINE L1 -3374 3190 2690 * 894 146 156 128 chr2 241609606 241609909 -11646674 - L1MB7 LINE L1 0 6184 5886 * 1093 144 5 21 chr2 241609911 241610099 -11646484 + MER65A LTR ERV1 102 286 -159 6732 134 227 37 chr2 241610099 241611524 -11645059 + pTR5 LTR ERV1 743 2438 0 744 99 54 0 chr2 241611544 241611655 -11644928 + MER65A LTR ERV1 329 445 0 1067 218 9 56 chr2 241611656 241611893 -11644690 - L1MC4a LINE L1 -5068 977 757 1776 138 32 0 chr2 241611893 241612175 -11644408 - AluSq SINE Alu -22 291 1 1067 218 9 56 chr2 241612175 241612258 -11644325 - L1MC4a LINE L1 -5288 757 672 603 177 111 55 chr2 241612263 241612444 -11644139 + MLT1C LTR MaLR 17 207 -260 704 212 27 14 chr2 241612445 241612591 -11643992 + MER34 LTR ERV1 1 148 -394 1533 168 4 25 chr2 241612629 241612903 -11643680 + MER34 LTR ERV1 130 397 -145 1154 213 75 80 chr2 241612891 241613252 -11643331 + MLT1A1 LTR MaLR 7 365 0 * 748 191 20 0 chr2 241613252 241613399 -11643184 + MER34 LTR ERV1 393 542 0 * 853 226 113 8 chr2 241613399 241613636 -11642947 + MLT1C LTR MaLR 205 466 -1 1790 235 67 57 chr2 241613638 241614293 -11642290 - L1MC4a LINE L1 -5377 668 7 330 203 179 24 chr2 241615012 241615135 -11641448 - L1ME4a LINE L1 -12 6109 5968 664 235 101 17 chr2 241615264 241615443 -11641140 + MIR SINE MIR 15 208 -54 2037 112 3 10 chr2 241615446 241615742 -11640841 - AluJb SINE Alu -18 294 1 629 301 104 0 chr2 241615973 241616222 -11640361 + L1MC4 LINE L1 7104 7378 -664 2417 82 36 53 chr2 241616235 241616651 -11639932 + L1MA2 LINE L1 5896 6304 0 298 240 188 0 chr2 241616715 241616811 -11639772 + Tigger7 DNA MER2_type 1 114 -619 1801 144 89 0 chr2 241617407 241617698 -11638885 + Tigger7 DNA MER2_type 101 417 -2070 1737 151 10 3 chr2 241617822 241618113 -11638470 + AluSx SINE Alu 1 293 -19 222 156 0 0 chr2 241618224 241618269 -11638314 + A-rich Low_complexity Low_complexity 1 45 0 42 20 0 0 chr2 241618378 241618427 -11638156 + AT_rich Low_complexity Low_complexity 1 49 0 376 135 0 0 chr2 241618427 241618479 -11638104 - MER66A LTR ERV1 -139 339 288 442 125 48 58 chr2 241618649 241618753 -11637830 + L1MC2 LINE L1 5858 5960 -373 1025 184 60 0 chr2 241618753 241618985 -11637598 + L1MA8 LINE L1 6033 6279 -12 21 36 0 0 chr2 241618992 241619020 -11637563 + AT_rich Low_complexity Low_complexity 1 28 0 309 231 77 0 chr2 241619024 241619115 -11637468 + L1M4 LINE L1 3289 3386 -2760 2012 150 54 11 chr2 241619128 241619482 -11637101 + L1MC2 LINE L1 5939 6307 -37 771 259 49 31 chr2 241619498 241619823 -11636760 + HAL1b LINE L1 601 931 -417 21 0 0 0 chr2 241619858 241619879 -11636704 + AT_rich Low_complexity Low_complexity 1 21 0 331 189 163 92 chr2 241620003 241620156 -11636427 + L1MC/D LINE L1 3065 3228 -2918 246 220 140 0 chr2 241620428 241620528 -11636055 + L1MC/D LINE L1 5364 5477 -2331 2202 146 5 3 chr2 241621126 241621495 -11635088 - L1P LINE L1 -1569 4577 4208 340 338 84 33 chr2 241621513 241621939 -11634644 + MERVL LTR ERVL 2485 2932 -2553 430 257 92 0 chr2 241622430 241622539 -11634044 - FLAM_C SINE Alu -14 119 1 1659 102 49 26 chr2 241622595 241622743 -11633840 - AluSx SINE Alu -37 275 117 189 0 111 0 chr2 241622743 241622779 -11633804 + T-rich Low_complexity Low_complexity 2 41 0 1659 102 49 26 chr2 241622779 241622895 -11633688 - AluSx SINE Alu -195 117 5 658 105 18 0 chr2 241622937 241623051 -11633532 + (TAGA)n Simple_repeat Simple_repeat 3 118 0 616 181 9 9 chr2 241623137 241623253 -11633330 + AluSg/x SINE Alu 84 199 -113 2181 61 18 0 chr2 241623463 241623740 -11632843 - AluY SINE Alu -18 293 12 2194 99 0 3 chr2 241625206 241625499 -11631084 - AluSx SINE Alu -6 306 15 2285 69 10 3 chr2 241626115 241626418 -11630165 - AluSc SINE Alu -3 306 2 361 188 0 0 chr2 241627756 241627820 -11628763 + MER53 DNA DNA 2 65 -124 1613 151 10 30 chr2 241628736 241629041 -11627542 + AluJb SINE Alu 5 303 -9 379 286 57 0 chr2 241629042 241629147 -11627436 + MIR SINE MIR 149 259 -3 200 274 97 16 chr2 241629276 241629338 -11627245 - L2 LINE L2 -5 3308 3242 342 289 237 5 chr2 241629375 241629622 -11626961 - L2 LINE L2 -256 3016 2720 270 145 16 32 chr2 241629643 241629705 -11626878 - L1ME4a LINE L1 0 6121 6061 2930 129 29 102 chr2 241629820 241630415 -11626168 + L1MB8 LINE L1 5565 6202 24 212 0 36 0 chr2 241630415 241630443 -11626140 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 1933 124 0 0 chr2 241630445 241630718 -11625865 - AluSq SINE Alu -34 279 7 2930 129 29 102 chr2 241630718 241630776 -11625807 + L1MB8 LINE L1 6112 6173 -5 541 209 23 47 chr2 241630803 241630932 -11625651 - MIR SINE MIR -136 126 1 37 0 0 0 chr2 241631688 241631725 -11624858 + AT_rich Low_complexity Low_complexity 1 37 0 859 266 71 30 chr2 241632786 241633263 -11623320 - MLT1G3 LTR MaLR -11 584 6 1564 170 35 3 chr2 241634649 241634938 -11621645 + AluJo SINE Alu 6 303 -9 1701 183 45 12 chr2 241635159 241635492 -11621091 + MER2 DNA MER2_type 1 344 0 1836 138 25 0 chr2 241636038 241636320 -11620263 - AluSx SINE Alu -19 293 5 2036 105 0 3 chr2 241636335 241636630 -11619953 - AluSx SINE Alu -18 294 1 2378 70 0 0 chr2 241636667 241636966 -11619617 - AluSc SINE Alu -10 299 1 231 276 39 103 chr2 241636990 241637098 -11619485 + L3 LINE CR1 1424 1521 -56 2164 108 3 0 chr2 241637098 241637393 -11619190 - AluSq SINE Alu -17 296 1 231 276 39 103 chr2 241637393 241637440 -11619143 + L3 LINE CR1 1521 1569 -8 2105 112 7 0 chr2 241637484 241637789 -11618794 - AluSg SINE Alu -3 307 1 582 212 69 78 chr2 241638730 241638961 -11617622 + MLT1K LTR MaLR 314 542 -46 275 258 34 22 chr2 241639084 241639173 -11617410 + MIR SINE MIR 64 153 -109 327 287 0 11 chr2 241639214 241639308 -11617275 + L1ME2 LINE L1 6062 6154 -10 206 273 0 0 chr2 241639313 241639357 -11617226 + L2 LINE L2 3251 3294 -19 1852 153 0 0 chr2 241639836 241640123 -11616460 - AluJb SINE Alu -10 302 16 273 329 130 0 chr2 241640533 241640679 -11615904 + MIR SINE MIR 28 192 -70 499 210 154 0 chr2 241640888 241641031 -11615552 - L1ME4a LINE L1 -1 6120 5956 615 303 100 0 chr2 241641146 241641377 -11615206 - MIR SINE MIR 0 262 9 312 270 126 0 chr2 241641393 241641531 -11615052 - L1ME4a LINE L1 -351 5770 5618 229 182 0 0 chr2 241641575 241641608 -11614975 + FLAM_A SINE Alu 1 33 -99 208 59 39 59 chr2 241641613 241641664 -11614919 + (ACATG)n Simple_repeat Simple_repeat 1 50 0 555 93 13 0 chr2 241641675 241641750 -11614833 + FLAM_A SINE Alu 38 113 -29 252 0 0 0 chr2 241641762 241641790 -11614793 + (CAAAG)n Simple_repeat Simple_repeat 4 31 0 552 268 76 25 chr2 241641903 241642101 -11614482 + LTR67 LTR ERVL 87 294 -263 276 247 31 52 chr2 241642138 241642235 -11614348 + LTR67 LTR ERVL 375 469 -88 364 336 38 55 chr2 241642548 241642783 -11613800 - L1ME4a LINE L1 -214 5907 5677 209 164 41 68 chr2 241643279 241643352 -11613231 + A-rich Low_complexity Low_complexity 3 73 0 2258 91 3 0 chr2 241643694 241643992 -11612591 - AluSq SINE Alu -14 299 1 457 301 129 22 chr2 241644299 241644729 -11611854 - L1MEd LINE L1 -4692 1692 1276 247 116 0 0 chr2 241644739 241644782 -11611801 - L1MB4 LINE L1 -12 6168 6126 839 129 53 0 chr2 241644794 241644926 -11611657 - FRAM SINE Alu -30 146 8 532 251 54 20 chr2 241644977 241645180 -11611403 - L1MEd LINE L1 -5014 1358 1149 2126 109 3 0 chr2 241645255 241645557 -11611026 + AluSx SINE Alu 1 303 -9 434 250 0 0 chr2 241645687 241645763 -11610820 + LTR67 LTR ERVL 115 190 -367 2133 97 3 0 chr2 241646012 241646302 -11610281 - AluSq SINE Alu -18 295 5 2156 112 0 0 chr2 241646456 241646752 -11609831 - AluSg SINE Alu -14 296 1 245 200 15 46 chr2 241646805 241646870 -11609713 - L1M4 LINE L1 -3211 3171 3109 1043 214 132 71 chr2 241646870 241647287 -11609296 + MLT1F LTR MaLR 1 391 -202 1818 181 26 9 chr2 241647287 241647629 -11608954 - MER7A DNA MER2_type 0 346 1 1043 214 132 71 chr2 241647629 241647646 -11608937 + MLT1F LTR MaLR 391 406 -187 1533 166 38 7 chr2 241647646 241647936 -11608647 + AluJb SINE Alu 1 299 -13 1955 141 7 0 chr2 241647938 241648235 -11608348 + AluSx SINE Alu 1 299 -13 1043 214 132 71 chr2 241648235 241648293 -11608290 + MLT1F LTR MaLR 406 592 -1 229 259 0 0 chr2 241648294 241648348 -11608235 - L1M4 LINE L1 -3270 3112 3059 307 241 64 21 chr2 241648372 241648513 -11608070 - L1M4 LINE L1 -5060 1324 1178 539 356 142 14 chr2 241649729 241650361 -11606222 + L2 LINE L2 2261 2973 -341 614 295 58 25 chr2 241650609 241651069 -11605514 - L1MC/D LINE L1 -749 5397 5106 294 95 0 0 chr2 241651117 241651159 -11605424 + (TATG)n Simple_repeat Simple_repeat 4 45 0 2027 121 6 13 chr2 241651179 241651492 -11605091 - AluSx SINE Alu -1 311 1 2325 93 0 3 chr2 241651854 241652165 -11604418 + AluSg SINE Alu 1 310 0 241 163 41 41 chr2 241652457 241652506 -11604077 + L1M4 LINE L1 5538 5586 -2456 215 360 22 11 chr2 241653315 241653404 -11603179 + MIR3 SINE MIR 10 99 -109 * 569 277 16 37 chr2 241653403 241653591 -11602992 + MIR SINE MIR 79 262 0 2026 120 3 10 chr2 241653802 241654102 -11602481 + AluSx SINE Alu 1 298 -14 2338 76 3 0 chr2 241655095 241655397 -11601186 + AluSx SINE Alu 1 303 -9 2104 101 13 0 chr2 241655692 241655990 -11600593 - AluSp SINE Alu -11 302 1 820 201 29 0 chr2 241657072 241657246 -11599337 + L1M4 LINE L1 5607 5785 -399 621 75 43 0 chr2 241657247 241657341 -11599242 + AluSg SINE Alu 2 99 -211 2131 100 3 3 chr2 241657757 241658057 -11598526 + AluY SINE Alu 1 300 -11 250 211 58 0 chr2 241658138 241658190 -11598393 - L1MC4 LINE L1 -122 7920 7866 25 31 0 0 chr2 241658462 241658494 -11598089 + AT_rich Low_complexity Low_complexity 1 32 0 210 289 78 62 chr2 241658808 241658936 -11597647 - L2 LINE L2 -10 3262 3133 369 351 44 17 chr2 241659106 241659531 -11597052 - L1MC/D LINE L1 -1167 4979 4535 2141 169 144 0 chr2 241659568 241659977 -11596606 + MLT1D LTR MaLR 7 474 -31 6894 121 16 11 chr2 241659983 241661016 -11595567 + L1MA2 LINE L1 5024 6067 -237 1944 127 7 3 chr2 241661016 241661307 -11595276 + AluSx SINE Alu 1 292 -20 6894 121 16 11 chr2 241661307 241661547 -11595036 + L1MA2 LINE L1 6067 6304 0 1561 119 0 59 chr2 241661560 241661863 -11594720 - AluSq SINE Alu -18 285 1 943 177 6 6 chr2 241662013 241662188 -11594395 + AluJb SINE Alu 137 311 -1 451 266 142 77 chr2 241662208 241662483 -11594100 + MLT1L LTR MaLR 85 389 -226 2413 59 16 0 chr2 241662483 241662789 -11593794 - AluY SINE Alu 0 311 1 451 266 142 77 chr2 241662789 241662866 -11593717 + MLT1L LTR MaLR 389 460 -155 324 0 0 0 chr2 241663285 241663321 -11593262 + (CA)n Simple_repeat Simple_repeat 2 37 0 680 124 54 39 chr2 241663462 241663591 -11592992 + FLAM_C SINE Alu 12 142 -1 624 228 141 81 chr2 241664153 241664188 -11592395 + L1MEc LINE L1 1780 1811 -4585 363 44 0 0 chr2 241664188 241664233 -11592350 + (CA)n Simple_repeat Simple_repeat 2 46 0 624 228 141 81 chr2 241664233 241664679 -11591904 + L1MEc LINE L1 1811 2290 -4106 * 712 222 56 0 chr2 241664659 241664821 -11591762 + L1M4 LINE L1 4680 4850 -1296 1972 121 0 7 chr2 241664821 241665124 -11591459 - AluSg SINE Alu 0 302 2 2314 80 0 0 chr2 241665125 241665424 -11591159 - AluY SINE Alu -12 299 1 26 0 0 0 chr2 241665432 241665458 -11591125 + AT_rich Low_complexity Low_complexity 1 26 0 256 123 88 0 chr2 241665908 241665965 -11590618 + L1MB3 LINE L1 6120 6181 -2 2182 87 17 0 chr2 241665975 241666273 -11590310 + AluSq SINE Alu 1 303 -10 463 140 32 21 chr2 241666363 241666456 -11590127 + L1MA5 LINE L1 6206 6299 -1 1761 151 3 3 chr2 241666906 241667197 -11589386 - AluSg SINE Alu -19 291 1 180 330 85 11 chr2 241667383 241667477 -11589106 - MIR SINE MIR -65 143 43 2194 106 3 3 chr2 241667555 241667867 -11588716 - AluSx SINE Alu 0 312 1 2073 114 10 0 chr2 241667869 241668168 -11588415 - AluSq SINE Alu -11 302 1 2321 54 0 10 chr2 241670354 241670649 -11585934 + AluY SINE Alu 1 292 -19 528 45 0 0 chr2 241670969 241671036 -11585547 + (TG)n Simple_repeat Simple_repeat 1 67 0 1887 95 27 17 chr2 241671886 241672180 -11584403 + AluSx SINE Alu 1 297 -15 211 0 28 56 chr2 241672808 241672844 -11583739 + (TAAAAA)n Simple_repeat Simple_repeat 1 35 0 234 128 0 0 chr2 241672866 241672905 -11583678 + (GAAAA)n Simple_repeat Simple_repeat 1 39 0 440 203 59 51 chr2 241673057 241673175 -11583408 + MER96B DNA MER1_type? 296 414 -3 468 195 238 27 chr2 241673305 241673561 -11583022 - MLT1H LTR MaLR -6 549 240 8648 43 2 8 chr2 241674135 241675213 -11581370 + MER11C LTR ERVK 1 1071 0 1798 198 25 43 chr2 241675636 241675695 -11580888 - MER63B DNA MER1_type -626 436 377 2472 89 0 0 chr2 241675695 241675997 -11580586 - AluSx SINE Alu -10 302 1 1798 198 25 43 chr2 241675997 241676381 -11580202 - MER63B DNA MER1_type -685 377 1 494 172 147 0 chr2 241677191 241677307 -11579276 - FLAM_C SINE Alu 0 133 1 2213 88 0 4 chr2 241677366 241677638 -11578945 + AluSg SINE Alu 1 271 -39 227 71 35 118 chr2 241679221 241679390 -11577193 + (CACTC)n Simple_repeat Simple_repeat 3 157 0 344 28 85 102 chr2 241679459 241679636 -11576947 + (CACTC)n Simple_repeat Simple_repeat 3 176 0 181 64 110 81 chr2 241679687 241679860 -11576723 + (CACTC)n Simple_repeat Simple_repeat 3 180 0 231 72 51 109 chr2 241679895 241680033 -11576550 + (CACTC)n Simple_repeat Simple_repeat 3 132 0 189 224 61 0 chr2 241681940 241681989 -11574594 - MER5A DNA MER1_type -107 82 31 612 216 26 20 chr2 241682130 241682143 -11574440 - L1MA10 LINE L1 -1 6333 6321 574 304 42 17 chr2 241682143 241682380 -11574203 - L1ME1 LINE L1 -5 6161 5919 2114 191 91 52 chr2 241682566 241682666 -11573917 - L1ME1 LINE L1 -254 5912 5817 2243 95 0 7 chr2 241682666 241682992 -11573591 - AluY SINE Alu 0 324 1 2114 191 91 52 chr2 241682992 241683168 -11573415 - L1ME1 LINE L1 -349 5817 5649 822 165 0 0 chr2 241683168 241683301 -11573282 + AluJ SINE Alu 1 133 -169 2114 191 91 52 chr2 241683301 241683825 -11572758 - L1ME1 LINE L1 -517 5649 5079 267 224 12 35 chr2 241684116 241684201 -11572382 + CT-rich Low_complexity Low_complexity 3 85 0 1250 114 0 0 chr2 241684557 241684723 -11571860 + AluJ SINE Alu 135 300 -12 2210 233 37 29 chr2 241684958 241685551 -11571032 - MLT1E2 LTR MaLR -28 598 1 233 277 9 71 chr2 241685745 241685857 -11570726 - MLT1K LTR MaLR -355 233 129 44 20 0 0 chr2 241686010 241686061 -11570522 + AT_rich Low_complexity Low_complexity 1 51 0 1412 157 15 38 chr2 241686068 241686329 -11570254 - AluJb SINE Alu -57 255 1 243 224 0 0 chr2 241686385 241686434 -11570149 + MIR SINE MIR 116 164 -98 261 155 0 0 chr2 241687665 241687723 -11568860 + (TG)n Simple_repeat Simple_repeat 2 59 0 405 313 6 17 chr2 241687766 241687942 -11568641 + (TG)n Simple_repeat Simple_repeat 1 174 0 261 360 21 48 chr2 241688516 241688705 -11567878 + MLT1K LTR MaLR 133 316 -272 305 266 38 0 chr2 241688840 241688919 -11567664 + MLT1K LTR MaLR 499 580 -8 221 286 13 26 chr2 241689259 241689336 -11567247 + MER5B DNA MER1_type 1 76 -102 2476 82 3 7 chr2 241689511 241689816 -11566767 - AluSx SINE Alu -8 304 1 367 309 132 0 chr2 241692843 241692979 -11563604 + MIR SINE MIR 108 261 -1 1627 83 58 80 chr2 241693853 241694129 -11562454 - AluSq SINE Alu -43 270 1 598 301 61 64 chr2 241694790 241695102 -11561481 - L1ME4a LINE L1 -237 5884 5574 636 144 6 4 chr2 241695465 241695592 -11560991 - MLT1E LTR MaLR 0 593 499 403 123 15 0 chr2 241695676 241695741 -11560842 - AluSc SINE Alu 0 299 234 2187 136 24 11 chr2 241695842 241696217 -11560366 - HERVH LTR ERV1 -7333 380 1 2526 88 123 25 chr2 241696219 241696627 -11559956 - LTR7 LTR ERV1 -2 448 1 443 281 95 45 chr2 241697104 241697325 -11559258 + MIR SINE MIR 15 246 -16 258 261 78 11 chr2 241697938 241698141 -11558442 + L1ME3A LINE L1 5742 5952 -218 223 343 71 25 chr2 241698506 241698625 -11557958 + MIR SINE MIR 30 153 -63 242 0 0 57 chr2 241699405 241699440 -11557143 + (TGG)n Simple_repeat Simple_repeat 1 33 0 254 176 0 20 chr2 241700448 241700499 -11556084 + LTR29 LTR ERV1 158 207 -415 * 535 256 183 47 chr2 241700489 241700806 -11555777 + LTR48B LTR ERV1 93 452 -192 2851 130 121 7 chr2 241700926 241701471 -11555112 + LTR62 LTR ERVK 111 717 -2 1506 278 19 44 chr2 241701495 241702082 -11554501 + HERVL32 LTR ERVL 1140 1691 -1733 2433 90 6 0 chr2 241702196 241702507 -11554076 - AluSp SINE Alu 0 313 1 1299 206 5 60 chr2 241702507 241702633 -11553950 - L1M4 LINE L1 -951 5195 5064 1286 158 5 18 chr2 241702633 241702855 -11553728 - MER20 DNA MER1_type 0 219 1 1299 206 5 60 chr2 241702855 241703096 -11553487 - L1M4 LINE L1 -1082 5064 4848 680 168 76 22 chr2 241703097 241703282 -11553301 + AluSg1 SINE Alu 4 198 -111 2173 124 10 0 chr2 241704922 241705221 -11551362 + AluSq SINE Alu 1 302 -11 1983 131 3 3 chr2 241705223 241705505 -11551078 + AluSx SINE Alu 1 282 -30 959 184 11 0 chr2 241706109 241706288 -11550295 + L1MDa LINE L1 21 201 -6339 1325 169 5 5 chr2 241706288 241706501 -11550082 - AluJb SINE Alu -14 298 86 1208 214 92 99 chr2 241706501 241706988 -11549595 + L1MDa LINE L1 196 679 -5861 185 318 178 0 chr2 241707675 241707782 -11548801 + L2 LINE L2 2614 2739 -575 646 251 94 14 chr2 241707836 241708059 -11548524 + MIR SINE MIR 12 252 -10 2035 113 53 0 chr2 241708283 241708567 -11548016 - AluSq SINE Alu -12 301 3 373 282 0 19 chr2 241708710 241708813 -11547770 - MARNA DNA Mariner -74 512 412 24 32 0 0 chr2 241709396 241709427 -11547156 + AT_rich Low_complexity Low_complexity 1 31 0 1234 225 111 3 chr2 241709516 241709823 -11546760 + MER58B DNA MER1_type 2 341 0 233 291 97 29 chr2 241709823 241709926 -11546657 + MIR3 SINE MIR 54 163 -45 2143 112 37 0 chr2 241710927 241711222 -11545361 - AluSp SINE Alu -7 306 1 653 268 24 6 chr2 241711696 241711864 -11544719 + MIR SINE MIR 40 210 -52 380 263 22 23 chr2 241711864 241712006 -11544577 - L1MD3 LINE L1 -89 7891 7591 2188 96 23 7 chr2 241712285 241712587 -11543996 - AluSx SINE Alu -5 307 1 634 195 16 0 chr2 241713689 241713812 -11542771 - Charlie1 DNA MER1_type -4 2757 2633 2330 105 0 10 chr2 241713818 241714124 -11542459 + AluSx SINE Alu 1 303 -9 1777 189 3 0 chr2 241714134 241714441 -11542142 + AluJb SINE Alu 1 308 -4 23 0 0 0 chr2 241715316 241715339 -11541244 + GC_rich Low_complexity Low_complexity 1 23 0 1019 136 19 7 chr2 241715600 241715754 -11540829 - FRAM SINE Alu -18 158 3 1498 153 0 0 chr2 241715791 241716007 -11540576 + AluSg/x SINE Alu 86 301 -9 2426 93 3 0 chr2 241716303 241716604 -11539979 - AluSp SINE Alu -11 302 1 2479 200 37 21 chr2 241717687 241717861 -11538722 + L1MB7 LINE L1 5607 5777 -407 2399 91 0 0 chr2 241717861 241718157 -11538426 + AluSg SINE Alu 1 296 -14 2479 200 37 21 chr2 241718157 241718551 -11538032 + L1MB7 LINE L1 5777 6184 0 636 179 0 28 chr2 241718565 241718710 -11537873 + AluSq/x SINE Alu 3 143 -170 2380 104 0 0 chr2 241719465 241719763 -11536820 + AluSx SINE Alu 1 298 -14 2327 97 0 0 chr2 241719917 241720207 -11536376 + AluSx SINE Alu 5 294 -18 420 250 0 0 chr2 241720456 241720532 -11536051 - LTR67 LTR ERVL -367 190 115 2457 80 3 0 chr2 241720662 241720962 -11535621 - AluSx SINE Alu -9 303 3 239 344 100 30 chr2 241720989 241721320 -11535263 + L1MB8 LINE L1 5554 5907 -214 275 247 31 52 chr2 241721636 241721733 -11534850 - LTR67 LTR ERVL -88 469 375 25 31 0 0 chr2 241722319 241722351 -11534232 + AT_rich Low_complexity Low_complexity 1 32 0 269 276 79 55 chr2 241722665 241722792 -11533791 - L2 LINE L2 -10 3262 3133 374 357 42 14 chr2 241722962 241723387 -11533196 - L1 LINE L1 -1167 4979 4535 1996 169 144 0 chr2 241723424 241723833 -11532750 + MLT1D LTR MaLR 7 474 -31 5061 123 19 12 chr2 241723839 241724873 -11531710 + L1MA2 LINE L1 5024 6066 -238 1851 159 3 22 chr2 241724873 241725188 -11531395 + AluJb SINE Alu 1 309 -3 979 202 4 49 chr2 241725207 241725474 -11531109 + L1MB8 LINE L1 5923 6177 -1 1494 210 61 21 chr2 241725489 241725918 -11530665 + L1M4 LINE L1 2162 2607 -3539 220 191 21 21 chr2 241725922 241725969 -11530614 + L2 LINE L2 3267 3313 0 828 225 145 47 chr2 241726458 241726885 -11529698 + MLT1H LTR MaLR 57 525 -24 305 176 11 33 chr2 241726894 241726985 -11529598 + L1ME3A LINE L1 5861 5949 -221 2356 111 0 0 chr2 241727135 241727442 -11529141 - AluSx SINE Alu -4 308 2 301 351 18 0 chr2 241727478 241727592 -11528991 - L2 LINE L2 -6 3266 3151 2046 164 0 3 chr2 241727776 241728086 -11528497 - AluJb SINE Alu -3 309 1 2402 68 7 26 chr2 241728174 241728482 -11528101 - AluSp SINE Alu -11 302 1 2383 60 7 17 chr2 241728498 241728798 -11527785 - AluSp SINE Alu -16 297 1 338 193 79 29 chr2 241729411 241729551 -11527032 + LTR2 LTR ERV1 303 449 0 33003 72 8 10 chr2 241729555 241734033 -11522550 + HERVE LTR ERV1 5 4470 -3343 21064 55 10 0 chr2 241734016 241736674 -11519909 + HERVE LTR ERV1 5129 7812 -1 * 1701 210 39 39 chr2 241736763 241737172 -11519411 + LTR2 LTR ERV1 41 449 0 407 179 0 13 chr2 241737225 241737303 -11519280 - MER45A DNA AcHobo -5 173 97 914 75 25 8 chr2 241737309 241737429 -11519154 + AluJo SINE Alu 14 135 -177 1302 85 0 6 chr2 241737432 241737596 -11518987 - AluY SINE Alu -22 289 127 1067 89 0 0 chr2 241737668 241737803 -11518780 + AluJb SINE Alu 173 307 -5 240 288 0 15 chr2 241738417 241738483 -11518100 - MIR SINE MIR -1 261 197 914 196 126 68 chr2 241739596 241739994 -11516589 + LTR37A LTR ERV1 1 421 -5 241 238 180 57 chr2 241740170 241740292 -11516291 + MER5B DNA MER1_type 42 178 0 21 36 0 0 chr2 241740765 241740793 -11515790 + GC_rich Low_complexity Low_complexity 1 28 0 1521 153 73 47 chr2 241741492 241741792 -11514791 + AluJb SINE Alu 1 308 -4 1134 221 66 136 chr2 241742202 241742857 -11513726 + LTR36 LTR ERV1 1 609 -2 2291 119 0 3 chr2 241742902 241743213 -11513370 + AluSx SINE Alu 3 312 0 1113 195 182 51 chr2 241743273 241743741 -11512842 + MLT1E2 LTR MaLR 17 605 -49 22 88 0 0 chr2 241744463 241744520 -11512063 + GC_rich Low_complexity Low_complexity 1 57 0 22 0 0 0 chr2 241744692 241744714 -11511869 + GC_rich Low_complexity Low_complexity 1 22 0 200 191 0 0 chr2 241744723 241744765 -11511818 + G-rich Low_complexity Low_complexity 1 42 0 233 271 106 0 chr2 241746200 241746285 -11510298 - MIR SINE MIR -113 149 56 234 0 0 0 chr2 241748858 241748884 -11507699 + (T)n Simple_repeat Simple_repeat 1 26 0 1729 209 39 32 chr2 241749561 241749967 -11506616 + LTR2 LTR ERV1 41 449 0 887 122 81 81 chr2 241750093 241750191 -11506392 + L1MB2 LINE L1 5943 6040 -131 1620 162 0 93 chr2 241750191 241750463 -11506120 - AluJo SINE Alu 0 302 65 1736 138 48 24 chr2 241750463 241750601 -11505982 + AluJo SINE Alu 1 134 -178 2379 95 13 0 chr2 241750601 241750906 -11505677 + AluSq SINE Alu 2 310 -3 1736 138 48 24 chr2 241750906 241751057 -11505526 + AluJo SINE Alu 134 297 -15 1620 162 0 93 chr2 241751057 241751117 -11505466 - AluJo SINE Alu -237 65 1 887 122 81 81 chr2 241751117 241751239 -11505344 + L1MB2 LINE L1 6039 6163 -8 31 20 0 20 chr2 241751266 241751294 -11505289 + AT_rich Low_complexity Low_complexity 1 29 -19 1865 154 25 0 chr2 241751294 241751574 -11505009 + AluSx SINE Alu 9 295 -17 31 20 0 20 chr2 241751574 241751594 -11504989 + AT_rich Low_complexity Low_complexity 29 48 0 584 191 35 0 chr2 241751618 241751733 -11504850 + AluJo SINE Alu 119 237 -75 1704 131 4 0 chr2 241751734 241751970 -11504613 - AluSg/x SINE Alu -3 307 71 392 295 6 38 chr2 241752006 241752219 -11504364 + T-rich Low_complexity Low_complexity 1 206 0 231 333 18 9 chr2 241752321 241752464 -11504119 + T-rich Low_complexity Low_complexity 1 144 0 1753 156 9 70 chr2 241752617 241752944 -11503639 - AluJb SINE Alu -5 307 1 795 219 30 24 chr2 241752963 241753127 -11503456 - FRAM SINE Alu 0 166 2 641 161 82 30 chr2 241753133 241753362 -11503221 - Charlie4 DNA MER1_type -6 1955 1718 257 273 15 0 chr2 241753365 241753431 -11503152 + L1ME LINE L1 12 78 -5992 950 161 7 0 chr2 241753434 241753577 -11503006 + AluJb SINE Alu 1 144 -168 1703 113 17 0 chr2 241753577 241753816 -11502767 + AluSx SINE Alu 1 243 -69 24 0 0 0 chr2 241754117 241754141 -11502442 + AT_rich Low_complexity Low_complexity 1 24 0 301 103 17 52 chr2 241754149 241754207 -11502376 + LTR7 LTR ERV1 395 450 0 1659 156 40 58 chr2 241754384 241754762 -11501821 - HERVH LTR ERV1 -1804 5909 5539 2633 170 7 0 chr2 241754762 241755236 -11501347 - HERVH LTR ERV1 -2850 4135 3959 2831 104 0 11 chr2 241755273 241755716 -11500867 - HERVH LTR ERV1 -3720 3993 3556 1765 174 0 0 chr2 241755716 241755981 -11500602 - AluJb SINE Alu -47 265 1 892 182 14 29 chr2 241755985 241756194 -11500389 - L1ME2 LINE L1 -1 6163 5958 31 58 0 0 chr2 241756212 241756264 -11500319 + AT_rich Low_complexity Low_complexity 1 52 0 2479 87 3 0 chr2 241756539 241756849 -11499734 + AluY SINE Alu 1 311 0 2373 84 10 0 chr2 241757776 241758084 -11498499 + AluSx SINE Alu 1 311 -1 1183 112 0 6 chr2 241758090 241758251 -11498332 + AluSg SINE Alu 1 160 -150 2339 86 0 3 chr2 241758502 241758793 -11497790 + AluSx SINE Alu 1 290 -22 2392 97 7 3 chr2 241758801 241759109 -11497474 + AluSq SINE Alu 1 309 -4 2411 84 3 3 chr2 241759137 241759446 -11497137 + AluSx SINE Alu 1 309 -3 1236 276 81 47 chr2 241759457 241760112 -11496471 + L1MC4a LINE L1 5284 5960 -1848 901 173 103 41 chr2 241760083 241760271 -11496312 + L1MB8 LINE L1 4968 5143 -1035 * 2570 46 10 7 chr2 241760271 241760578 -11496005 + AluY SINE Alu 1 308 -3 901 173 103 41 chr2 241760578 241760589 -11495994 + L1MB8 LINE L1 5143 5152 -1026 2423 83 10 0 chr2 241760589 241760889 -11495694 + AluSq SINE Alu 2 304 -9 901 173 103 41 chr2 241760889 241761695 -11494888 + L1MB8 LINE L1 5152 6162 -16 228 171 0 0 chr2 241762512 241762547 -11494036 - Alu SINE Alu -261 41 7 2039 143 3 3 chr2 241762762 241763056 -11493527 - AluSx SINE Alu -18 294 1 2281 108 3 3 chr2 241763092 241763398 -11493185 - AluSc SINE Alu -3 306 1 28 0 0 0 chr2 241763477 241763505 -11493078 + AT_rich Low_complexity Low_complexity 1 28 0 518 56 14 0 chr2 241763505 241763576 -11493007 - U2 snRNA snRNA -116 72 1 2412 93 0 0 chr2 241764667 241764968 -11491615 + AluY SINE Alu 5 305 -6 388 316 129 36 chr2 241765005 241765337 -11491246 - L2 LINE L2 -1 3312 2950 2478 53 7 10 chr2 241765615 241765914 -11490669 + AluY SINE Alu 1 298 -13 705 193 42 78 chr2 241766131 241766280 -11490303 + MER20 DNA MER1_type 32 174 -45 1569 174 13 37 chr2 241766280 241766579 -11490004 + AluJb SINE Alu 1 292 -20 705 193 42 78 chr2 241766579 241766621 -11489962 + MER20 DNA MER1_type 174 216 -3 1749 111 4 11 chr2 241767108 241767369 -11489214 - AluSg SINE Alu -51 259 1 4069 226 103 86 chr2 241767369 241768093 -11488490 - L1M4 LINE L1 -1508 4638 3928 376 81 32 0 chr2 241768093 241768155 -11488428 - MADE1 DNA Mariner 0 80 17 4069 226 103 86 chr2 241768155 241768257 -11488326 - L1M4 LINE L1 -2218 3928 3829 2273 108 10 3 chr2 241768257 241768553 -11488030 - AluSq SINE Alu -15 298 1 1733 154 6 64 chr2 241768558 241768720 -11487863 - AluJo SINE Alu -18 294 157 2389 107 10 0 chr2 241768720 241769030 -11487553 - AluSq SINE Alu 0 313 1 1733 154 6 64 chr2 241769030 241769179 -11487404 - AluJo SINE Alu -155 157 1 270 0 9 0 chr2 241769185 241769260 -11487323 + (TTTTA)n Simple_repeat Simple_repeat 3 32 0 4069 226 103 86 chr2 241769260 241769287 -11487296 - L1M4 LINE L1 -2324 3822 3797 2116 134 3 0 chr2 241769287 241769586 -11486997 - AluSg SINE Alu -10 300 1 4069 226 103 86 chr2 241769586 241770004 -11486579 - L1M4 LINE L1 -2349 3797 3388 1763 150 0 72 chr2 241770004 241770332 -11486251 + AluJo SINE Alu 5 310 0 4069 226 103 86 chr2 241770332 241771168 -11485415 - L1M4 LINE L1 -2758 3388 2388 2134 87 47 0 chr2 241771169 241771446 -11485137 + AluY SINE Alu 1 290 -21 908 124 8 0 chr2 241771455 241771584 -11484999 + FLAM_C SINE Alu 1 130 -3 319 276 112 88 chr2 241771596 241771922 -11484661 - L1ME LINE L1 -5666 404 74 628 119 0 0 chr2 241771922 241772006 -11484577 + AluS SINE Alu 2 85 -228 478 173 24 39 chr2 241772176 241772303 -11484280 - FRAM SINE Alu -31 145 21 1210 118 0 0 chr2 241772345 241772514 -11484069 - AluSg/x SINE Alu -7 305 137 403 139 0 28 chr2 241772514 241772586 -11483997 + AluS SINE Alu 228 297 -12 11187 175 24 37 chr2 241772801 241772882 -11483701 + Charlie8 DNA MER1_type 74 155 -2262 1815 144 3 45 chr2 241772882 241773194 -11483389 + AluJb SINE Alu 3 301 -11 11187 175 24 37 chr2 241773194 241773428 -11483155 + Charlie8 DNA MER1_type 155 391 -2026 2078 122 35 0 chr2 241773428 241773716 -11482867 + AluSg SINE Alu 1 298 -12 11187 175 24 37 chr2 241773716 241775710 -11480873 + Charlie8 DNA MER1_type 391 2353 -64 2351 99 0 0 chr2 241776265 241776557 -11480026 + AluSq SINE Alu 1 292 -21 258 241 146 58 chr2 241776558 241776616 -11479967 - L1ME4a LINE L1 -9 6112 6060 2446 83 0 3 chr2 241776616 241776918 -11479665 + AluSc SINE Alu 1 301 -8 258 241 146 58 chr2 241776918 241776996 -11479587 - L1ME4a LINE L1 -61 6060 5964 1482 217 65 102 chr2 241777105 241777526 -11479057 + L1MC4 LINE L1 6126 6561 -1481 1784 153 3 34 chr2 241777526 241777820 -11478763 + AluJo SINE Alu 5 289 -23 1482 217 65 102 chr2 241777820 241778029 -11478554 + L1MC4 LINE L1 6561 6774 -1268 2210 125 3 0 chr2 241778029 241778052 -11478531 - AluSq SINE Alu -7 306 285 192 40 0 0 chr2 241778052 241778077 -11478506 + (GTTTG)n Simple_repeat Simple_repeat 1 25 0 2210 125 3 0 chr2 241778077 241778358 -11478225 - AluSq SINE Alu -28 285 1 1482 217 65 102 chr2 241778358 241778486 -11478097 + L1MC4 LINE L1 6774 6905 -1137 244 320 82 49 chr2 241778495 241778885 -11477698 - L2 LINE L2 -1212 2102 1700 610 290 153 18 chr2 241778929 241779315 -11477268 + MLT1J2 LTR MaLR 5 442 -8 411 280 42 12 chr2 241779316 241779484 -11477099 + L1MC4a LINE L1 5758 5930 -1878 2157 100 0 0 chr2 241779493 241779793 -11476790 + AluY SINE Alu 1 300 0 2310 99 10 0 chr2 241780728 241781021 -11475562 - AluSp SINE Alu -17 296 1 7895 47 36 16 chr2 241781161 241782148 -11474435 - LTR13 LTR ERVK 0 1007 1 1735 184 23 3 chr2 241782155 241782460 -11474123 + AluJb SINE Alu 1 311 -1 753 82 10 0 chr2 241783472 241783569 -11473014 + AluS SINE Alu 2 99 -214 2422 107 13 13 chr2 241783682 241784065 -11472518 - L1PA16 LINE L1 -132 6034 5652 689 124 0 0 chr2 241784104 241784193 -11472390 + AluSq SINE Alu 10 98 -215 1096 80 0 0 chr2 241784193 241784330 -11472253 + AluSp/q SINE Alu 170 306 -7 207 0 0 0 chr2 241784330 241784353 -11472230 + (TA)n Simple_repeat Simple_repeat 2 24 0 240 35 0 0 chr2 241784354 241784383 -11472200 + (CA)n Simple_repeat Simple_repeat 2 30 0 2127 109 20 10 chr2 241784396 241784690 -11471893 + AluSx SINE Alu 1 297 -15 31 0 0 43 chr2 241784690 241784716 -11471867 + AT_rich Low_complexity Low_complexity 1 26 -18 1992 144 7 0 chr2 241784716 241785007 -11471576 + AluSx SINE Alu 1 293 -19 31 0 0 43 chr2 241785007 241785026 -11471557 + AT_rich Low_complexity Low_complexity 26 44 0 24 67 0 0 chr2 241785663 241785708 -11470875 + AT_rich Low_complexity Low_complexity 1 45 0 2302 90 10 80 chr2 241785708 241785779 -11470804 - L1PA16 LINE L1 -518 5648 5574 2236 99 27 0 chr2 241785779 241786072 -11470511 + AluSq SINE Alu 1 301 -12 2302 90 10 80 chr2 241786072 241786227 -11470356 - L1PA16 LINE L1 -592 5574 5410 2062 135 17 0 chr2 241786227 241786524 -11470059 - AluSx SINE Alu -10 302 1 2302 90 10 80 chr2 241786524 241786609 -11469974 - L1PA16 LINE L1 -756 5410 5321 2276 98 3 0 chr2 241786609 241786932 -11469651 - AluSp SINE Alu 0 324 1 2302 90 10 80 chr2 241786932 241787109 -11469474 - L1PA16 LINE L1 -845 5321 5190 230 179 0 54 chr2 241787108 241787164 -11469419 - L1ME2 LINE L1 -180 5984 5932 * 1335 171 16 48 chr2 241787170 241787241 -11469342 - L1ME2 LINE L1 -286 5878 5806 1918 153 3 3 chr2 241787241 241787536 -11469047 + AluJo SINE Alu 1 295 -17 1335 171 16 48 chr2 241787536 241787774 -11468809 - L1ME2 LINE L1 -358 5806 5579 292 224 0 0 chr2 241787771 241787829 -11468754 - L1ME LINE L1 -547 5617 5560 * 1402 144 18 0 chr2 241787833 241788062 -11468521 + MER50 LTR ERV1 2 234 -500 * 1430 170 11 19 chr2 241788042 241788312 -11468271 + MER50 LTR ERV1 430 697 -37 1959 205 35 84 chr2 241788329 241788497 -11468086 - L1ME LINE L1 -602 5560 5385 2187 122 0 7 chr2 241788497 241788800 -11467783 - AluSx SINE Alu -11 301 1 1959 205 35 84 chr2 241788800 241788844 -11467739 - L1ME LINE L1 -777 5385 5340 2350 110 10 0 chr2 241788844 241789152 -11467431 - AluSx SINE Alu -1 311 1 2303 112 3 0 chr2 241789156 241789460 -11467123 - AluSp SINE Alu -8 305 1 1190 173 117 60 chr2 241789463 241789746 -11466837 - AluJo SINE Alu -3 299 1 1959 205 35 84 chr2 241789746 241789895 -11466688 - L1ME LINE L1 -827 5335 5180 1897 103 43 60 chr2 241789895 241790195 -11466388 + AluSx SINE Alu 1 295 -17 1959 205 35 84 chr2 241790195 241790488 -11466095 - L1ME LINE L1 -982 5180 4874 2225 126 7 0 chr2 241790488 241790798 -11465785 - AluSx SINE Alu 0 312 1 1588 139 120 0 chr2 241790807 241791073 -11465510 - AluJo SINE Alu -14 298 1 1959 205 35 84 chr2 241791073 241791333 -11465250 - L1ME LINE L1 -1296 4866 4680 2066 133 10 7 chr2 241791333 241791634 -11464949 + AluJb SINE Alu 1 302 -10 29 0 0 0 chr2 241791775 241791804 -11464779 + AT_rich Low_complexity Low_complexity 1 29 0 2544 62 0 3 chr2 241791809 241792118 -11464465 - AluY SINE Alu -3 308 1 347 240 62 21 chr2 241792216 241792312 -11464271 - L2 LINE L2 -19 3294 3195 605 155 0 26 chr2 241792520 241792636 -11463947 - FLAM_C SINE Alu -1 142 30 2610 55 0 13 chr2 241792653 241792963 -11463620 - AluY SINE Alu -5 306 1 2255 108 20 0 chr2 241792966 241793262 -11463321 - AluSx SINE Alu -10 302 1 2332 84 27 3 chr2 241793991 241794288 -11462295 - AluSq SINE Alu -9 304 1 827 184 296 5 chr2 241794854 241795060 -11461523 - AluJo SINE Alu -45 267 2 1753 153 25 4 chr2 241795801 241796076 -11460507 - AluSx SINE Alu -23 289 9 228 130 0 0 chr2 241796488 241796534 -11460049 + (CAAAAA)n Simple_repeat Simple_repeat 2 47 0 388 282 110 25 chr2 241799655 241799818 -11456765 - MIR SINE MIR -8 254 78 288 278 44 0 chr2 241800115 241800205 -11456378 - L2 LINE L2 -5 3308 3215 348 172 0 0 chr2 241801805 241801892 -11454691 + (CAT)n Simple_repeat Simple_repeat 3 89 0 2249 86 20 20 chr2 241802107 241802411 -11454172 + AluSq SINE Alu 1 304 -9 240 172 0 0 chr2 241802650 241802708 -11453875 + (CAT)n Simple_repeat Simple_repeat 1 58 0 180 222 0 0 chr2 241802757 241802829 -11453754 + (CAT)n Simple_repeat Simple_repeat 3 74 0 304 274 168 0 chr2 241803391 241803504 -11453079 + MIR SINE MIR 107 238 -24 205 190 13 51 chr2 241805696 241805775 -11450808 + (CGGGG)n Simple_repeat Simple_repeat 5 80 0 919 110 62 0 chr2 241806670 241806816 -11449767 + AluSg/x SINE Alu 135 289 -20 1969 150 13 3 chr2 241806827 241807134 -11449449 + AluJb SINE Alu 1 310 -2 488 237 136 12 chr2 241807238 241807407 -11449176 - MIR SINE MIR -3 259 70 785 162 113 0 chr2 241807448 241807590 -11448993 - AluJb SINE Alu -18 294 137 644 263 216 12 chr2 241807635 241808122 -11448461 - L1MC4a LINE L1 -1641 6167 5582 338 297 9 0 chr2 241808620 241808731 -11447852 - LTR33A LTR ERVL 0 523 412 832 199 0 0 chr2 241809942 241810083 -11446500 - AluJb SINE Alu -37 275 135 2361 93 0 13 chr2 241810084 241810397 -11446186 - AluY SINE Alu -2 309 1 289 185 108 0 chr2 241811120 241811185 -11445398 - MLT1A1 LTR MaLR 0 365 294 439 0 0 0 chr2 241811185 241811237 -11445346 + L1PA3 LINE L1 6100 6151 -4 228 86 0 0 chr2 241811241 241811276 -11445307 + (A)n Simple_repeat Simple_repeat 1 35 0 1146 226 57 7 chr2 241811276 241811572 -11445011 - MLT1A1 LTR MaLR -54 311 1 2102 98 18 7 chr2 241811896 241812172 -11444411 + AluSg SINE Alu 10 288 -22 648 129 100 14 chr2 241812193 241812333 -11444250 + MER96B DNA MER1_type? 8 159 -258 1981 145 10 10 chr2 241812333 241812637 -11443946 - AluJb SINE Alu -8 304 1 1254 112 0 17 chr2 241812661 241812839 -11443744 - AluSg/x SINE Alu -4 306 132 2088 106 36 40 chr2 241812839 241813141 -11443442 - AluSx SINE Alu -11 301 1 1098 157 80 4 chr2 241813142 241813391 -11443192 + MER96B DNA MER1_type? 150 417 0 262 243 154 56 chr2 241813399 241813666 -11442917 + L2 LINE L2 2871 3163 -109 2213 107 0 0 chr2 241813697 241813978 -11442605 + AluSp SINE Alu 1 281 -32 729 155 0 0 chr2 241813983 241814112 -11442471 + GA-rich Low_complexity Low_complexity 2 130 0 788 112 8 0 chr2 241814112 241814237 -11442346 + L1MB2 LINE L1 5485 5610 -573 2143 128 13 0 chr2 241814237 241814543 -11442040 + AluSx SINE Alu 1 310 -2 662 114 0 35 chr2 241814544 241814658 -11441925 + L1MB2 LINE L1 5816 5925 -246 212 0 36 0 chr2 241814846 241814874 -11441709 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 2251 125 0 0 chr2 241814968 241815272 -11441311 + AluSx SINE Alu 1 304 -8 2356 201 92 28 chr2 241815282 241816009 -11440574 + L1MB7 LINE L1 3874 4647 -1499 734 169 127 0 chr2 241816062 241816298 -11440285 + L1MB7 LINE L1 5188 5445 -729 685 129 0 10 chr2 241816303 241816404 -11440179 + FLAM_A SINE Alu 28 127 -15 3530 156 43 45 chr2 241816411 241816453 -11440130 + L1MB7 LINE L1 5448 5489 -695 838 199 0 0 chr2 241816453 241816584 -11439999 + FLAM_C SINE Alu 1 131 -2 3530 156 43 45 chr2 241816584 241816629 -11439954 + L1MB7 LINE L1 5489 5533 -651 2529 84 0 0 chr2 241816629 241816937 -11439646 - AluY SINE Alu -3 308 1 3530 156 43 45 chr2 241816937 241817131 -11439452 + L1MB7 LINE L1 5533 5726 -458 1692 166 35 7 chr2 241817131 241817421 -11439162 - AluJo SINE Alu -14 298 1 3530 156 43 45 chr2 241817421 241817875 -11438708 + L1MB7 LINE L1 5726 6184 0 221 273 0 0 chr2 241818256 241818311 -11438272 + L2 LINE L2 3254 3308 -5 217 283 47 19 chr2 241818311 241818417 -11438166 - L2 LINE L2 -210 3062 2954 375 306 0 10 chr2 241818563 241818661 -11437922 - L2 LINE L2 -559 2755 2659 275 125 0 0 chr2 241818931 241818971 -11437612 + Alu SINE Alu 1 40 -259 560 109 9 55 chr2 241818971 241819081 -11437502 + AluSg/x SINE Alu 206 310 0 2039 125 50 0 chr2 241819251 241819548 -11437035 - AluSx SINE Alu 0 312 1 817 150 71 0 chr2 241819548 241819675 -11436908 - AluSq/x SINE Alu -176 136 1 1721 161 3 21 chr2 241819714 241820005 -11436578 + AluJo SINE Alu 7 292 -20 2062 115 7 0 chr2 241820429 241820707 -11435876 - AluSx SINE Alu -32 280 1 246 261 94 54 chr2 241821149 241821352 -11435231 - MLT1L LTR MaLR -88 500 313 2324 78 10 10 chr2 241821615 241821909 -11434674 - AluSx SINE Alu -18 294 1 425 269 17 0 chr2 241822316 241822435 -11434148 + MER45A DNA AcHobo 46 166 -12 519 197 41 16 chr2 241823506 241823628 -11432955 + MIR SINE MIR 61 185 -77 1124 133 11 28 chr2 241823819 241823999 -11432584 + AluSg/x SINE Alu 130 306 -6 1777 189 3 0 chr2 241824522 241824829 -11431754 - AluJb SINE Alu -4 308 1 2391 95 0 10 chr2 241824839 241825145 -11431438 - AluSx SINE Alu -9 303 1 349 339 81 44 chr2 241825145 241825385 -11431198 + L1M4 LINE L1 3078 3329 -2817 1008 126 16 60 chr2 241825388 241825571 -11431012 - FRAM SINE Alu -1 175 1 1492 148 0 0 chr2 241825607 241825817 -11430766 + AluSg/x SINE Alu 86 295 -15 964 170 19 0 chr2 241825861 241826020 -11430563 + FRAM SINE Alu 1 161 -15 1286 176 41 123 chr2 241826414 241826485 -11430098 + LTR1B LTR ERV1 333 408 -612 2276 64 0 88 chr2 241826485 241826815 -11429768 - AluSc SINE Alu -4 305 5 1286 176 41 123 chr2 241826815 241827211 -11429372 + LTR1B LTR ERV1 408 963 -57 504 217 17 8 chr2 241827271 241827391 -11429192 + LTR28 LTR ERV1 900 1020 0 2541 39 3 19 chr2 241827941 241828248 -11428335 + AluY SINE Alu 1 302 -9 1838 155 40 3 chr2 241828440 241828736 -11427847 + AluJo SINE Alu 1 307 -5 1969 132 52 0 chr2 241828765 241829054 -11427529 + AluJo SINE Alu 1 304 -8 252 256 61 0 chr2 241829538 241829620 -11426963 - L1MC/D LINE L1 -1977 5831 5745 689 87 0 0 chr2 241829860 241829952 -11426631 + AluS SINE Alu 1 92 -220 398 148 0 0 chr2 241830110 241830171 -11426412 + LTR33A LTR ERVL 463 523 0 1386 101 9 8 chr2 241830275 241830600 -11425983 - MLT1B LTR MaLR 0 390 1 596 234 19 44 chr2 241830662 241830812 -11425771 - L1MC/D LINE L1 -2318 5490 5345 2381 195 30 11 chr2 241830812 241830978 -11425605 + MER70A LTR ERVL 1 162 -310 2473 77 0 3 chr2 241830978 241831275 -11425308 + AluSq SINE Alu 11 306 -7 2381 195 30 11 chr2 241831275 241831570 -11425013 + MER70A LTR ERVL 162 471 -1 596 234 19 44 chr2 241831570 241831624 -11424959 - L1MC/D LINE L1 -2463 5345 5291 2325 102 0 3 chr2 241831896 241832199 -11424384 + AluSg SINE Alu 1 302 -8 420 313 43 56 chr2 241832199 241832338 -11424245 - L1MC/D LINE L1 -1045 5101 4965 1820 141 42 18 chr2 241832338 241832622 -11423961 + AluJb SINE Alu 2 292 -20 420 313 43 56 chr2 241832622 241832715 -11423868 - L1MC/D LINE L1 -1181 4965 4872 257 256 80 51 chr2 241832730 241832867 -11423716 + L2 LINE L2 1296 1436 -1878 2235 110 30 0 chr2 241833009 241833310 -11423273 - AluSx SINE Alu -2 310 1 337 259 35 0 chr2 241834276 241834361 -11422222 + MER77 LTR ERV1 298 385 -220 313 286 126 16 chr2 241834348 241834530 -11422053 + MER77 LTR ERV1 313 514 -91 * 564 199 93 33 chr2 241835292 241835443 -11421140 + Charlie4 DNA MER1_type 18 177 -1784 1855 193 18 77 chr2 241835493 241835621 -11420962 + MER82 DNA MER2_type 7 141 -512 2142 121 3 25 chr2 241835621 241835936 -11420647 - AluSx SINE Alu -4 308 1 1855 193 18 77 chr2 241835936 241836033 -11420550 + MER82 DNA MER2_type 141 242 -411 2157 116 7 7 chr2 241836033 241836327 -11420256 - AluSq SINE Alu -19 294 1 1855 193 18 77 chr2 241836327 241836526 -11420057 + MER82 DNA MER2_type 242 402 -251 2465 77 0 7 chr2 241836526 241836824 -11419759 + AluSg SINE Alu 1 296 -14 1855 193 18 77 chr2 241836824 241836889 -11419694 + MER82 DNA MER2_type 402 469 -184 2401 75 27 0 chr2 241836893 241837186 -11419397 + AluSg SINE Alu 1 301 -9 3236 88 24 4 chr2 241837187 241837718 -11418865 - LTR9B LTR ERV1 -65 579 1 653 216 0 8 chr2 241837958 241838092 -11418491 + FLAM_C SINE Alu 1 133 0 281 159 0 0 chr2 241838114 241838158 -11418425 - LTR7 LTR ERV1 0 450 407 1616 191 13 13 chr2 241838859 241839162 -11417421 - AluJo SINE Alu -9 303 1 325 295 98 0 chr2 241839970 241840082 -11416501 + LTR67 LTR ERVL 432 554 -3 186 43 0 0 chr2 241840287 241840310 -11416273 + (TTTTA)n Simple_repeat Simple_repeat 5 27 0 975 127 0 8 chr2 241840311 241840445 -11416138 - FLAM_C SINE Alu -10 133 1 296 167 0 0 chr2 241841116 241841170 -11415413 - L2 LINE L2 -6 3307 3254 243 261 101 0 chr2 241841599 241841718 -11414865 - L1ME4a LINE L1 -32 6089 5959 2341 104 3 0 chr2 241841743 241842040 -11414543 + AluSx SINE Alu 1 298 -14 2442 77 0 40 chr2 241842093 241842419 -11414164 + AluSq SINE Alu 1 313 0 347 219 142 77 chr2 241842568 241842793 -11413790 + L1MC5 LINE L1 7261 7513 -448 1441 158 77 29 chr2 241842793 241843066 -11413517 + AluJb SINE Alu 1 286 -26 347 219 142 77 chr2 241843066 241843151 -11413432 + L1MC5 LINE L1 7513 7591 -370 971 211 66 35 chr2 241843156 241843384 -11413199 - AluSg/x SINE Alu -11 299 65 1266 129 43 106 chr2 241843384 241843658 -11412925 + AluJb SINE Alu 50 312 0 283 258 217 20 chr2 241843713 241844059 -11412524 - L1ME4a LINE L1 -773 5518 5256 1795 198 61 15 chr2 241844155 241844550 -11412033 - MER39 LTR ERV1 -1 706 294 21 36 0 0 chr2 241844794 241844822 -11411761 + AT_rich Low_complexity Low_complexity 1 28 0 195 42 0 0 chr2 241846329 241846353 -11410230 + (T)n Simple_repeat Simple_repeat 1 24 0 1913 124 47 0 chr2 241846830 241847128 -11409455 + AluSx SINE Alu 1 312 0 450 245 60 65 chr2 241847153 241847369 -11409214 + L1M4 LINE L1 3617 3831 -2315 25 31 0 0 chr2 241847499 241847531 -11409052 + AT_rich Low_complexity Low_complexity 1 32 0 279 288 32 56 chr2 241847695 241847740 -11408843 - MIR SINE MIR -16 246 201 3373 108 39 2 chr2 241847740 241848248 -11408335 + MER1A DNA MER1_type 1 527 0 279 288 32 56 chr2 241848248 241848327 -11408256 - MIR SINE MIR -61 201 125 300 29 0 0 chr2 241848329 241848364 -11408219 + U6 snRNA snRNA 1 35 -72 187 265 41 0 chr2 241848384 241848433 -11408150 - MIR SINE MIR -155 107 57 318 184 161 0 chr2 241848654 241848741 -11407842 + L1MA9 LINE L1 6178 6278 -34 2058 141 3 0 chr2 241849127 241849424 -11407159 - AluSq SINE Alu -11 302 5 1379 143 40 16 chr2 241849710 241849962 -11406621 - MER46B DNA MER2_type -2 234 102 2187 129 3 19 chr2 241850089 241850400 -11406183 - AluSx SINE Alu -5 307 2 2278 115 7 0 chr2 241850401 241850706 -11405877 - AluSp SINE Alu -6 307 1 1674 137 119 7 chr2 241851327 241851604 -11404979 - AluSg1 SINE Alu -1 308 1 22 56 0 0 chr2 241851788 241851824 -11404759 + AT_rich Low_complexity Low_complexity 1 36 0 1625 179 0 54 chr2 241851826 241851974 -11404609 + AluJb SINE Alu 1 126 -186 2256 83 7 0 chr2 241851974 241852277 -11404306 + AluSg SINE Alu 5 309 0 1625 179 0 54 chr2 241852277 241852440 -11404143 + AluJb SINE Alu 126 296 -16 24 0 0 0 chr2 241852794 241852818 -11403765 + AT_rich Low_complexity Low_complexity 1 24 0 2576 71 3 0 chr2 241853090 241853400 -11403183 + AluY SINE Alu 1 311 0 842 132 0 0 chr2 241854053 241854174 -11402409 - FLAM_C SINE Alu -12 121 1 398 100 100 0 chr2 241854200 241854270 -11402313 - AluJ/FRAM SINE Alu -9 293 217 1920 146 29 0 chr2 241854299 241854580 -11402003 - AluSx SINE Alu -23 289 1 1069 229 62 11 chr2 241854605 241854880 -11401703 - AluJo SINE Alu -13 289 1 306 303 113 54 chr2 241854880 241855361 -11401222 + L1M2 LINE L1 1612 2116 -4733 1976 97 17 40 chr2 241855519 241855681 -11400902 - AluSg SINE Alu -19 291 138 180 0 0 0 chr2 241855681 241855701 -11400882 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1976 97 17 40 chr2 241855701 241855836 -11400747 - AluSg SINE Alu -172 138 1 773 165 0 8 chr2 241855848 241855981 -11400602 - FLAM_C SINE Alu -1 132 1 1876 192 75 5 chr2 241855982 241856368 -11400215 + MLT2D LTR ERVL 2 414 0 1011 66 0 0 chr2 241856478 241856599 -11399984 + AluSg/x SINE Alu 181 301 -11 2348 99 0 3 chr2 241857574 241857867 -11398716 - AluSx SINE Alu -6 306 15 2550 62 3 3 chr2 241858485 241858790 -11397793 - AluSc SINE Alu -3 306 2 189 121 0 0 chr2 241860907 241860940 -11395643 + (T)n Simple_repeat Simple_repeat 1 33 0 949 94 0 0 chr2 241860942 241861070 -11395513 - FLAM_C SINE Alu -1 132 5 348 188 0 0 chr2 241861991 241862055 -11394528 - MER53 DNA DNA -124 65 2 2420 95 0 3 chr2 241863005 241863309 -11393274 + AluSx SINE Alu 1 303 -9 702 96 0 10 chr2 241863905 241864009 -11392574 + FLAM_C SINE Alu 16 118 -25 288 0 0 0 chr2 241864009 241864041 -11392542 + (CAAT)n Simple_repeat Simple_repeat 1 32 0 1638 150 44 11 chr2 241864521 241864833 -11391750 + AluJo SINE Alu 1 321 0 2015 159 0 3 chr2 241867034 241867335 -11389248 - AluJb SINE Alu -12 300 1 2493 98 0 0 chr2 241867711 241868016 -11388567 + AluSx SINE Alu 1 305 -7 658 143 56 32 chr2 241868113 241868239 -11388344 - FLAM_C SINE Alu 0 133 5 324 0 0 0 chr2 241868376 241868412 -11388171 + (TG)n Simple_repeat Simple_repeat 2 37 0 239 244 181 89 chr2 241868834 241868911 -11387672 - MLT1L LTR MaLR -155 460 392 2399 66 17 0 chr2 241868911 241869199 -11387384 + AluY SINE Alu 1 293 -18 239 244 181 89 chr2 241869199 241869391 -11387192 - MLT1L LTR MaLR -223 392 166 597 178 0 17 chr2 241869409 241869527 -11387056 - AluSg/x SINE Alu -113 199 84 341 265 16 158 chr2 241869556 241869613 -11386970 - L1ME LINE L1 -390 5731 5668 694 102 17 0 chr2 241869613 241869731 -11386852 + (TCTA)n Simple_repeat Simple_repeat 3 122 0 341 265 16 158 chr2 241869731 241869773 -11386810 - L1ME LINE L1 -453 5668 5622 1956 96 53 25 chr2 241869773 241869891 -11386692 + AluSx SINE Alu 5 118 -194 189 0 111 0 chr2 241869891 241869927 -11386656 + A-rich Low_complexity Low_complexity 2 41 0 1956 96 53 25 chr2 241869927 241870089 -11386494 + AluSx SINE Alu 118 293 -19 341 265 16 158 chr2 241870089 241870131 -11386452 - L1ME LINE L1 -499 5622 5576 1757 166 24 10 chr2 241870131 241870426 -11386157 + AluJo SINE Alu 1 299 -13 341 265 16 158 chr2 241870426 241870535 -11386048 - L1ME LINE L1 -545 5576 5515 537 274 149 51 chr2 241870572 241870922 -11385661 + L1ME4a LINE L1 5675 6058 -63 734 282 114 55 chr2 241870929 241871142 -11385441 - MLT1L LTR MaLR -13 602 403 2571 59 16 0 chr2 241871142 241871448 -11385135 + AluY SINE Alu 1 311 0 734 282 114 55 chr2 241871448 241871723 -11384860 - MLT1L LTR MaLR -212 403 85 980 176 0 6 chr2 241871743 241871919 -11384664 - AluJb SINE Alu -1 311 137 1978 117 3 0 chr2 241872069 241872352 -11384231 + AluSx SINE Alu 1 284 -28 6924 121 16 11 chr2 241872364 241872603 -11383980 - L1MA2 LINE L1 0 6304 6068 1987 127 3 3 chr2 241872603 241872895 -11383688 - AluSx SINE Alu -20 292 1 6924 121 16 11 chr2 241872895 241873928 -11382655 - L1MA2 LINE L1 -236 6068 5024 2141 169 144 0 chr2 241873934 241874343 -11382240 - MLT1D LTR MaLR -31 474 7 369 351 44 17 chr2 241874380 241874805 -11381778 + L1MC4a LINE L1 4535 4979 -1167 265 276 79 55 chr2 241874975 241875102 -11381481 + L2 LINE L2 3133 3262 -10 25 31 0 0 chr2 241875417 241875449 -11381134 + AT_rich Low_complexity Low_complexity 1 32 0 250 211 58 0 chr2 241875721 241875773 -11380810 + L1MC4 LINE L1 7866 7920 -122 2131 100 3 3 chr2 241875854 241876154 -11380429 - AluY SINE Alu -11 300 1 181 282 64 39 chr2 241877071 241877149 -11379434 - MIR3 SINE MIR -30 178 99 575 330 107 42 chr2 241877735 241878473 -11378110 + L1MC4a LINE L1 5122 5388 -758 561 189 90 16 chr2 241878481 241878603 -11377980 - FLAM_A SINE Alu -2 131 1 757 237 14 30 chr2 241878771 241878990 -11377593 + L1MD2 LINE L1 6161 7807 -1 2066 105 30 0 chr2 241879185 241879480 -11377103 + AluSp SINE Alu 3 306 -7 362 253 0 0 chr2 241879648 241879735 -11376848 + MER69 DNA AcHobo 124 210 -2316 457 30 30 0 chr2 241880717 241880784 -11375799 + (TCTA)n Simple_repeat Simple_repeat 4 72 0 386 291 79 26 chr2 241880819 241881008 -11375575 + MLT1J LTR MaLR 4 202 -309 1474 164 51 4 chr2 241881199 241881473 -11375110 - AluJo SINE Alu -25 287 1 2063 92 3 3 chr2 241881479 241881791 -11374792 - AluSx SINE Alu 0 312 1 521 236 0 0 chr2 241881791 241881897 -11374686 + MER69 DNA AcHobo 286 391 -835 263 159 23 212 chr2 241881906 241881963 -11374620 + MER69 DNA AcHobo 1963 2029 -497 1635 225 141 6 chr2 241881963 241882439 -11374144 + MER34 LTR ERV1 3 542 0 263 159 23 212 chr2 241882439 241882460 -11374123 + MER69 DNA AcHobo 2029 2010 -516 1803 133 29 4 chr2 241882460 241882738 -11373845 - AluSq SINE Alu -28 285 1 263 159 23 212 chr2 241882738 241882790 -11373793 + MER69 DNA AcHobo 2009 2069 -457 806 150 12 31 chr2 241882805 241882965 -11373618 + FRAM SINE Alu 11 167 -9 2323 81 0 3 chr2 241883051 241883348 -11373235 - AluSg SINE Alu -14 296 1 413 212 93 13 chr2 241883370 241883521 -11373062 + MER69 DNA AcHobo 2074 2236 -290 534 211 66 13 chr2 241883574 241883726 -11372857 + MER69 DNA AcHobo 2228 2387 -139 827 179 0 0 chr2 241883726 241883860 -11372723 + AluJb SINE Alu 171 304 -8 1937 118 7 26 chr2 241883869 241884174 -11372409 + AluSx SINE Alu 1 299 -13 363 193 149 44 chr2 241884202 241884316 -11372267 + MER69 DNA AcHobo 2400 2525 -1 1948 76 4 0 chr2 241884670 241884932 -11371651 + AluYa5 SINE Alu 43 305 -6 1236 99 6 0 chr2 241884932 241885104 -11371479 + AluSg/x SINE Alu 132 304 -6 189 0 0 0 chr2 241885104 241885125 -11371458 + (TA)n Simple_repeat Simple_repeat 2 22 0 311 280 91 28 chr2 241885579 241885722 -11370861 + MER5A DNA MER1_type 23 174 -15 475 261 42 42 chr2 241885963 241886128 -11370455 + MIR SINE MIR 85 249 -13 222 183 33 0 chr2 241886272 241886332 -11370251 + (TTTA)n Simple_repeat Simple_repeat 2 63 0 1390 179 4 11 chr2 241886339 241886601 -11369982 - AluJo SINE Alu -52 260 1 838 258 146 27 chr2 241887789 241888192 -11368391 + MLT1C LTR MaLR 9 459 -8 492 273 107 47 chr2 241889001 241889254 -11367329 + L2 LINE L2 2635 2902 -412 269 350 89 16 chr2 241889907 241890153 -11366430 + L2 LINE L2 1979 2242 -1072 981 190 11 0 chr2 241891059 241891238 -11365345 + L1MD1 LINE L1 21 201 -6339 1278 164 0 5 chr2 241891238 241891452 -11365131 - AluJb SINE Alu -14 298 86 1530 203 249 78 chr2 241891452 241892094 -11364489 + L1MD1 LINE L1 196 947 -5593 522 153 0 0 chr2 241892095 241892180 -11364403 + AluS SINE Alu 228 312 0 703 285 85 0 chr2 241892189 241892435 -11364148 + L1M4 LINE L1 4678 4944 -1202 1439 188 60 45 chr2 241892444 241892788 -11363795 + L1MD1 LINE L1 4538 4876 -1736 2193 104 7 0 chr2 241892788 241893097 -11363486 + AluSq SINE Alu 2 312 -1 1439 188 60 45 chr2 241893097 241893275 -11363308 + L1MD1 LINE L1 4876 5050 -1562 2223 82 0 22 chr2 241893275 241893591 -11362992 + AluY SINE Alu 1 309 -2 1439 188 60 45 chr2 241893591 241894312 -11362271 + L1MD1 LINE L1 5050 5869 -743 1969 131 3 6 chr2 241894312 241894624 -11361959 + AluSx SINE Alu 1 311 -1 2612 134 73 15 chr2 241894639 241895116 -11361467 + L1MD1 LINE L1 5969 6473 -163 314 319 119 38 chr2 241895830 241896040 -11360543 + L3 LINE CR1 1262 1488 -89 216 241 205 45 chr2 241896109 241896221 -11360362 - MIR3 SINE MIR -66 142 13 1861 149 0 13 chr2 241897139 241897454 -11359129 - AluJb SINE Alu -1 311 1 705 180 16 0 chr2 241897477 241897599 -11358984 - FLAM_A SINE Alu -7 126 3 1898 106 33 0 chr2 241897616 241897926 -11358657 - AluSp SINE Alu 0 319 1 23 0 0 0 chr2 241897926 241897949 -11358634 + AT_rich Low_complexity Low_complexity 1 23 0 2242 75 0 0 chr2 241897990 241898272 -11358311 + AluSg SINE Alu 21 302 -8 886 157 69 0 chr2 241899194 241899353 -11357230 - FAM SINE Alu -5 170 1 711 266 25 28 chr2 241901219 241901446 -11355137 - MIR SINE MIR -34 228 1 309 333 75 17 chr2 241901457 241901631 -11354952 + L3 LINE CR1 547 730 -847 261 246 108 0 chr2 241901737 241901802 -11354781 + L3 LINE CR1 1284 1355 -222 21 0 0 0 chr2 241901917 241901938 -11354645 + AT_rich Low_complexity Low_complexity 1 21 0 236 272 87 81 chr2 241902004 241902475 -11354108 + L1ME2 LINE L1 5507 5995 -169 312 220 328 0 chr2 241903266 241903443 -11353140 + L2 LINE L2 2739 2973 -341 236 321 104 0 chr2 241903839 241903973 -11352610 + L1ME LINE L1 608 755 -5617 1577 235 105 115 chr2 241904187 241904924 -11351659 + L1ME LINE L1 781 1524 -5039 2058 119 0 0 chr2 241904924 241905218 -11351365 + AluSx SINE Alu 1 294 -18 1577 235 105 115 chr2 241905218 241905407 -11351176 + L1ME LINE L1 1524 1713 -4850 1471 145 0 0 chr2 241905407 241905634 -11350949 + AluSg/x SINE Alu 74 300 -10 1577 235 105 115 chr2 241905634 241905701 -11350882 + L1ME LINE L1 1713 1779 -4784 2003 86 41 54 chr2 241905701 241906016 -11350567 - AluSx SINE Alu -1 311 1 1577 235 105 115 chr2 241906016 241906201 -11350382 + L1ME LINE L1 1779 1964 -4599 363 44 0 0 chr2 241906201 241906246 -11350337 + (CA)n Simple_repeat Simple_repeat 2 46 0 1577 235 105 115 chr2 241906246 241906692 -11349891 + L1ME LINE L1 1964 2457 -4106 * 2057 203 19 52 chr2 241906672 241906834 -11349749 + L1M4 LINE L1 4680 4846 -1300 1972 121 0 7 chr2 241906834 241907137 -11349446 - AluSg SINE Alu 0 302 2 2135 100 24 0 chr2 241907138 241907429 -11349154 - AluSg SINE Alu -12 298 1 2057 203 19 52 chr2 241907429 241907669 -11348914 + L1M4 LINE L1 4846 5092 -1054 1353 153 5 18 chr2 241907669 241907891 -11348692 + MER20 DNA MER1_type 1 219 0 2057 203 19 52 chr2 241907891 241908017 -11348566 + L1M4 LINE L1 5092 5196 -950 2271 90 6 0 chr2 241908017 241908328 -11348255 + AluSp SINE Alu 1 313 0 1711 155 3 23 chr2 241908340 241908650 -11347933 + AluJb SINE Alu 6 309 -3 1007 195 4 49 chr2 241908669 241908936 -11347647 + L1MB8 LINE L1 5923 6177 -1 1594 201 61 21 chr2 241908951 241909380 -11347203 + L1ME LINE L1 2398 2843 -3539 238 227 0 0 chr2 241909388 241909432 -11347151 + L2 LINE L2 3270 3313 0 180 361 0 28 chr2 241909516 241909588 -11346995 - MIR SINE MIR -20 242 173 955 225 143 46 chr2 241909921 241910362 -11346221 + MLT1H LTR MaLR 57 383 -7 284 186 12 35 chr2 241910362 241910448 -11346135 + L1ME3A LINE L1 5866 5949 -221 2214 110 0 0 chr2 241910598 241910906 -11345677 - AluSx SINE Alu -3 309 2 292 351 18 0 chr2 241910942 241911056 -11345527 - L2 LINE L2 -6 3266 3151 1887 164 0 3 chr2 241911240 241911550 -11345033 - AluJb SINE Alu -3 309 1 2254 68 7 26 chr2 241911638 241911946 -11344637 - AluSp SINE Alu -11 302 1 2243 60 7 17 chr2 241911962 241912262 -11344321 - AluSp SINE Alu -16 297 1 24 53 0 0 chr2 241912876 241912914 -11343669 + AT_rich Low_complexity Low_complexity 1 38 0 207 250 71 89 chr2 241913755 241913867 -11342716 + L2 LINE L2 2337 2446 -868 570 314 49 9 chr2 241913985 241914208 -11342375 + MIR SINE MIR 27 258 -4 223 325 25 0 chr2 241914246 241914326 -11342257 + L2 LINE L2 2676 2757 -557 1620 217 101 26 chr2 241914825 241915265 -11341318 + MER74A LTR ERVL 1 396 -64 299 137 305 11 chr2 241916083 241916178 -11340405 + L1M4 LINE L1 4487 4609 -1537 1237 154 15 54 chr2 241916214 241916473 -11340110 + Charlie1 DNA MER1_type 685 933 -1828 365 149 0 103 chr2 241916508 241916595 -11339988 + Charlie1 DNA MER1_type 928 1005 -1756 301 125 107 0 chr2 241916599 241916655 -11339928 + L1MD3 LINE L1 7909 7970 -25 4515 207 96 30 chr2 241916686 241917698 -11338885 + Charlie1 DNA MER1_type 995 2091 -670 2037 111 3 10 chr2 241917698 241917996 -11338587 + AluSx SINE Alu 1 296 -16 4515 207 96 30 chr2 241917996 241918103 -11338480 + Charlie1 DNA MER1_type 2091 2189 -572 2019 101 14 0 chr2 241918168 241918445 -11338138 - AluSc SINE Alu -28 281 1 2065 112 7 0 chr2 241918452 241918739 -11337844 - AluSx SINE Alu -23 289 1 1649 204 52 84 chr2 241918757 241919135 -11337448 + L1M4 LINE L1 3855 4213 -1933 252 0 0 0 chr2 241919135 241919163 -11337420 + (CAAAA)n Simple_repeat Simple_repeat 1 28 0 1649 204 52 84 chr2 241919163 241919317 -11337266 + L1M4 LINE L1 4213 4370 -1776 1661 179 63 89 chr2 241919317 241919376 -11337207 + Charlie1 DNA MER1_type 2173 2232 -529 2141 104 0 3 chr2 241919376 241919674 -11336909 - AluSx SINE Alu -15 297 1 1661 179 63 89 chr2 241919674 241920212 -11336371 + Charlie1 DNA MER1_type 2232 2755 -6 1891 128 14 0 chr2 241920408 241920697 -11335886 - AluSx SINE Alu -19 293 1 297 304 107 49 chr2 241920868 241921131 -11335452 + L1ME2 LINE L1 5457 5734 -2074 974 232 40 27 chr2 241921666 241921890 -11334693 + MIR SINE MIR 3 229 -33 380 316 149 7 chr2 241922640 241922941 -11333642 + L2 LINE L2 1611 1954 -1360 23 33 0 0 chr2 241923200 241923230 -11333353 + AT_rich Low_complexity Low_complexity 1 30 0 199 242 65 16 chr2 241923335 241923397 -11333186 + L3 LINE CR1 1307 1371 -206 1831 116 43 4 chr2 241923454 241923730 -11332853 - AluSg SINE Alu -23 287 1 387 247 21 21 chr2 241923881 241923974 -11332609 - MARNA DNA Mariner -82 504 412 24 32 0 0 chr2 241924561 241924592 -11331991 + AT_rich Low_complexity Low_complexity 1 31 0 1305 225 111 3 chr2 241924681 241924988 -11331595 + MER58B DNA MER1_type 2 341 0 251 291 97 29 chr2 241924988 241925091 -11331492 + MIR3 SINE MIR 54 163 -45 260 181 181 0 chr2 241925961 241926033 -11330550 + MLT1H LTR MaLR 398 482 -67 451 201 169 19 chr2 241926527 241926681 -11329902 - MIR SINE MIR -66 196 20 252 363 30 0 chr2 241926812 241926947 -11329636 + MIR SINE MIR 117 255 -7 344 238 172 20 chr2 241929388 241929539 -11327044 - MER5B DNA MER1_type 0 178 5 2367 77 3 0 chr2 241930206 241930506 -11326077 - AluSx SINE Alu -11 301 1 2243 86 3 0 chr2 241930566 241930857 -11325726 - AluSg SINE Alu -18 292 1 582 212 69 78 chr2 241931799 241932030 -11324553 + MLT1K LTR MaLR 314 542 -46 275 258 34 22 chr2 241932153 241932242 -11324341 + MIR SINE MIR 64 153 -109 327 287 0 11 chr2 241932283 241932377 -11324206 + L1ME2 LINE L1 6062 6154 -10 206 273 0 0 chr2 241932382 241932426 -11324157 + L2 LINE L2 3251 3294 -19 1852 153 0 0 chr2 241932904 241933191 -11323392 - AluJb SINE Alu -10 302 16 312 309 107 0 chr2 241933601 241933750 -11322833 + MIR SINE MIR 28 192 -70 499 210 154 0 chr2 241933959 241934102 -11322481 - L1ME4a LINE L1 -1 6120 5956 615 303 100 0 chr2 241934217 241934448 -11322135 - MIR SINE MIR 0 262 9 312 270 126 0 chr2 241934464 241934602 -11321981 - L1ME4a LINE L1 -351 5770 5618 229 182 0 0 chr2 241934646 241934679 -11321904 + FLAM_A SINE Alu 1 33 0 208 59 39 59 chr2 241934684 241934735 -11321848 + (ACATG)n Simple_repeat Simple_repeat 1 50 0 555 93 13 0 chr2 241934746 241934821 -11321762 + FLAM_A SINE Alu 38 113 -29 252 0 0 0 chr2 241934833 241934861 -11321722 + (CAAAG)n Simple_repeat Simple_repeat 4 31 0 552 268 76 25 chr2 241934974 241935172 -11321411 + LTR67 LTR ERVL 87 294 -263 276 247 31 52 chr2 241935209 241935306 -11321277 + LTR67 LTR ERVL 375 469 -88 282 313 102 36 chr2 241935619 241935951 -11320632 - L1ME4a LINE L1 -214 5907 5554 2264 83 3 0 chr2 241935978 241936278 -11320305 + AluSx SINE Alu 3 303 -9 434 250 0 0 chr2 241936408 241936484 -11320099 + LTR67 LTR ERVL 115 190 -367 2172 97 0 0 chr2 241936733 241937023 -11319560 - AluSx SINE Alu -18 294 5 2156 112 0 0 chr2 241937177 241937473 -11319110 - AluSg SINE Alu -14 296 1 245 200 15 46 chr2 241937526 241937591 -11318992 - L1M4 LINE L1 -3211 3171 3109 1122 217 124 68 chr2 241937591 241938010 -11318573 + MLT1F LTR MaLR 1 395 -198 1818 181 26 9 chr2 241938010 241938352 -11318231 - MER7A DNA MER2_type 0 346 1 1122 217 124 68 chr2 241938352 241938369 -11318214 + MLT1F LTR MaLR 395 410 -183 1533 166 38 7 chr2 241938369 241938659 -11317924 + AluJb SINE Alu 1 299 -13 2045 141 0 0 chr2 241938661 241938960 -11317623 + AluSx SINE Alu 1 299 -13 1122 217 124 68 chr2 241938960 241939018 -11317565 + MLT1F LTR MaLR 410 592 -1 229 259 0 0 chr2 241939019 241939073 -11317510 - L1M4 LINE L1 -3270 3112 3059 307 241 64 21 chr2 241939097 241939238 -11317345 - L1M4 LINE L1 -5060 1324 1178 539 356 142 14 chr2 241940454 241941086 -11315497 + L2 LINE L2 2261 2973 -341 614 295 58 25 chr2 241941334 241941794 -11314789 - L1ME4a LINE L1 -749 5397 5106 294 95 0 0 chr2 241941842 241941884 -11314699 + (TATG)n Simple_repeat Simple_repeat 4 45 0 2069 117 0 16 chr2 241941904 241942220 -11314363 - AluSx SINE Alu -1 311 1 2325 93 0 3 chr2 241942583 241942894 -11313689 + AluSg SINE Alu 1 310 0 241 163 41 41 chr2 241943185 241943234 -11313349 + L1MB7 LINE L1 5538 5586 -2409 215 360 22 11 chr2 241944043 241944132 -11312451 + MIR3 SINE MIR 10 99 -109 * 569 277 16 37 chr2 241944131 241944319 -11312264 + MIR SINE MIR 79 262 0 2026 120 3 10 chr2 241944530 241944830 -11311753 + AluSx SINE Alu 1 298 -14 2338 76 3 0 chr2 241945823 241946125 -11310458 + AluSx SINE Alu 1 303 -9 2266 93 3 0 chr2 241946420 241946721 -11309862 - AluSp SINE Alu -11 302 1 2578 193 34 20 chr2 241947803 241947977 -11308606 + L1MB7 LINE L1 5607 5777 -407 2240 91 0 0 chr2 241947977 241948273 -11308310 + AluSg SINE Alu 1 296 -14 2578 193 34 20 chr2 241948273 241948657 -11307926 + L1MB7 LINE L1 5777 6173 -11 1095 91 0 0 chr2 241948678 241948821 -11307762 + AluSq/x SINE Alu 1 143 -170 2006 103 7 3 chr2 241949577 241949892 -11306691 + AluSx SINE Alu 1 316 0 1515 185 7 14 chr2 241949908 241950205 -11306378 + AluJb SINE Alu 11 305 -7 237 203 34 17 chr2 241951619 241951678 -11304905 + MIR SINE MIR 183 242 -20 719 284 67 8 chr2 241951705 241951973 -11304610 + HAL1 LINE L1 4 287 -2220 2004 210 115 67 chr2 241952035 241952714 -11303869 + HAL1 LINE L1 421 1066 -1441 1902 100 73 0 chr2 241952714 241953003 -11303580 + AluSg SINE Alu 1 310 0 2004 210 115 67 chr2 241953003 241953308 -11303275 + HAL1 LINE L1 1066 1355 -1152 1570 148 23 43 chr2 241953308 241953613 -11302970 - AluJo SINE Alu -13 299 1 2004 210 115 67 chr2 241953613 241953940 -11302643 + HAL1 LINE L1 1355 1847 -660 1946 208 109 25 chr2 241954033 241954592 -11301991 - L1ME3A LINE L1 -3 6167 5562 2148 106 7 0 chr2 241954862 241955164 -11301419 + AluSx SINE Alu 1 304 -8 2078 150 30 28 chr2 241955533 241955927 -11300656 + L1MB3 LINE L1 5748 6142 -41 881 203 51 0 chr2 241956049 241956226 -11300357 + MER5A DNA MER1_type 3 188 -1 1904 135 34 3 chr2 241956370 241956666 -11299917 - AluSx SINE Alu -7 305 1 512 159 56 9 chr2 241956697 241956804 -11299779 - L1PB2 LINE L1 -3 6148 6037 3156 94 29 0 chr2 241956812 241957258 -11299325 - L1PB2 LINE L1 -171 5980 5522 1896 117 35 0 chr2 241957272 241957562 -11299021 - AluSc SINE Alu -8 301 2 2071 102 3 0 chr2 241957591 241957905 -11298678 + AluSp SINE Alu 1 315 0 2170 98 7 0 chr2 241957909 241958196 -11298387 + AluSq SINE Alu 1 289 -24 544 248 0 21 chr2 241958326 241958471 -11298112 - MER104 DNA Tc2 -35 145 4 1369 204 111 17 chr2 241958762 241959124 -11297459 + MSTD LTR MaLR 1 396 0 348 340 86 24 chr2 241959358 241959567 -11297016 - MIR SINE MIR -21 241 20 2262 61 7 3 chr2 241960266 241960562 -11296021 + AluY SINE Alu 1 297 -14 229 255 0 0 chr2 241960935 241960982 -11295601 + (CGTG)n Simple_repeat Simple_repeat 1 47 0 1887 151 118 47 chr2 241962018 241962373 -11294210 + Charlie1b DNA MER1_type 1 400 -2361 2017 122 0 10 chr2 241962373 241962676 -11293907 - AluSx SINE Alu -12 300 1 1887 151 118 47 chr2 241962676 241962805 -11293778 + Charlie1b DNA MER1_type 400 519 -4 2148 86 20 7 chr2 241963906 241964209 -11292374 + AluSx SINE Alu 1 307 -5 387 261 18 29 chr2 241964488 241964630 -11291953 + L1MD3 LINE L1 7678 7891 -104 701 268 24 6 chr2 241964630 241964798 -11291785 - MIR SINE MIR -52 210 40 1984 112 37 0 chr2 241965272 241965567 -11291016 + AluSp SINE Alu 1 306 -7 2279 82 0 10 chr2 241966325 241966631 -11289952 - AluY SINE Alu -8 303 1 376 175 0 0 chr2 241966774 241966837 -11289746 + MER41A LTR ERV1 391 453 -101 369 0 0 0 chr2 241967165 241967206 -11289377 + (TG)n Simple_repeat Simple_repeat 2 42 0 571 253 74 64 chr2 241967236 241967643 -11288940 + L1MC5 LINE L1 7499 7909 -52 884 118 0 22 chr2 241967709 241967844 -11288739 - FLAM_A SINE Alu -5 137 6 255 245 19 0 chr2 241967893 241967946 -11288637 - L1MC/D LINE L1 -2185 5623 5570 373 333 20 50 chr2 241968143 241968341 -11288242 - L1MC/D LINE L1 -1044 5102 4911 463 191 75 0 chr2 241968656 241968750 -11287833 + MER5A DNA MER1_type 9 109 -80 716 119 0 0 chr2 241968822 241968923 -11287660 - AluSg/x SINE Alu -12 300 200 1703 128 36 16 chr2 241968972 241969278 -11287305 + AluSx SINE Alu 1 312 0 1857 133 0 11 chr2 241969464 241969749 -11286834 + AluJb SINE Alu 15 296 -16 2197 101 0 0 chr2 241969840 241970137 -11286446 + AluSq SINE Alu 1 297 -16 1276 145 19 0 chr2 241970449 241970663 -11285920 + AluJo SINE Alu 82 299 -13 299 266 91 49 chr2 241970685 241970828 -11285755 - L2 LINE L2 -1 3312 3164 * 453 248 9 19 chr2 241970810 241970915 -11285668 + MIR SINE MIR 93 196 -66 2205 116 0 0 chr2 241970924 241971234 -11285349 + AluSg SINE Alu 1 310 0 298 260 323 31 chr2 241971391 241971583 -11285000 - MIR SINE MIR -2 260 13 818 200 42 0 chr2 241971931 241972096 -11284487 + MER20 DNA MER1_type 2 173 -46 204 347 41 0 chr2 241972681 241972779 -11283804 - L2 LINE L2 -11 3261 3160 2374 82 3 0 chr2 241973553 241973859 -11282724 - AluSg SINE Alu -3 307 1 2230 99 0 0 chr2 241974446 241974738 -11281845 - AluSx SINE Alu -20 292 1 2249 81 3 0 chr2 241975132 241975427 -11281156 + AluY SINE Alu 1 296 -15 795 169 169 0 chr2 241975427 241975570 -11281013 + AluJb SINE Alu 129 301 -11 3715 142 36 0 chr2 241975580 241976187 -11280396 + L1PA16 LINE L1 5536 6164 -2 183 100 0 0 chr2 241976885 241976915 -11279668 + (CCCTAA)n Simple_repeat Simple_repeat 4 33 0 1932 134 3 13 chr2 241977717 241978022 -11278561 + AluJo SINE Alu 1 302 -10 1742 154 7 13 chr2 241978959 241979123 -11277460 - AluJb SINE Alu -15 297 134 2415 60 0 3 chr2 241979123 241979422 -11277161 - AluY SINE Alu -13 298 1 1742 154 7 13 chr2 241979422 241979556 -11277027 - AluJb SINE Alu -178 134 1 1493 251 55 73 chr2 241981030 241981170 -11275413 + L1MC4 LINE L1 7401 7542 -500 2227 83 0 10 chr2 241981170 241981470 -11275113 - AluSg SINE Alu -12 298 2 1493 251 55 73 chr2 241981470 241981983 -11274600 + L1MC4 LINE L1 7542 8042 0 223 214 0 71 chr2 241982922 241982978 -11273605 + L2 LINE L2 3219 3270 -2 1821 158 3 10 chr2 241983734 241984037 -11272546 + AluJb SINE Alu 1 301 -11 413 327 32 80 chr2 241984041 241984478 -11272105 + L2 LINE L2 1612 2027 -1287 1209 260 107 18 chr2 241984585 241984604 -11271979 + L1MC4a LINE L1 5352 5368 -786 294 29 0 0 chr2 241984604 241984639 -11271944 + (TA)n Simple_repeat Simple_repeat 1 35 0 1209 260 107 18 chr2 241984639 241985128 -11271455 + L1MC4a LINE L1 5368 5555 -599 306 73 0 0 chr2 241985179 241985220 -11271363 + (CA)n Simple_repeat Simple_repeat 2 42 0 24 0 0 29 chr2 241985420 241985440 -11271143 + AT_rich Low_complexity Low_complexity 1 21 -13 1770 128 31 10 chr2 241985440 241985728 -11270855 - AluSq SINE Alu -19 294 1 24 0 0 29 chr2 241985728 241985742 -11270841 + AT_rich Low_complexity Low_complexity 21 34 0 835 139 8 8 chr2 241985742 241985871 -11270712 - AluJb SINE Alu -182 130 2 256 130 0 22 chr2 241985871 241985917 -11270666 + L1MD2 LINE L1 6291 6335 -24 228 339 105 0 chr2 241985968 241986216 -11270367 + L1M4 LINE L1 4072 4345 -1801 792 143 0 38 chr2 241986300 241986433 -11270150 + FLAM_C SINE Alu 2 129 -14 2281 97 3 0 chr2 241986445 241986754 -11269829 + AluSp SINE Alu 1 310 -3 1986 101 0 34 chr2 241987489 241987785 -11268798 + AluSx SINE Alu 9 294 -18 573 275 68 24 chr2 241988326 241988533 -11268050 + MIR SINE MIR 47 262 0 2362 64 3 0 chr2 241988597 241988892 -11267691 - AluSp SINE Alu -17 296 1 376 352 68 12 chr2 241988938 241989100 -11267483 - MER5A DNA MER1_type 0 189 8 2302 94 0 0 chr2 241989236 241989545 -11267038 + AluSx SINE Alu 1 309 -3 231 276 39 103 chr2 241989589 241989636 -11266947 - L3 LINE CR1 -8 1569 1521 2164 108 3 0 chr2 241989636 241989931 -11266652 + AluSq SINE Alu 1 296 -17 231 276 39 103 chr2 241989931 241990039 -11266544 - L3 LINE CR1 -56 1521 1424 2370 70 0 0 chr2 241990063 241990361 -11266222 + AluSc SINE Alu 1 298 -11 2071 105 0 0 chr2 241990398 241990692 -11265891 + AluSx SINE Alu 1 294 -18 1836 138 25 0 chr2 241990707 241990989 -11265594 + AluSx SINE Alu 5 293 -19 1685 186 45 12 chr2 241991458 241991791 -11264792 - MER2 DNA MER2_type 0 344 1 1581 172 31 3 chr2 241992012 241992302 -11264281 - AluJo SINE Alu -9 303 6 870 264 71 29 chr2 241993688 241994164 -11262419 + MLT1G3 LTR MaLR 6 584 -11 37 0 0 0 chr2 241995226 241995263 -11261320 + AT_rich Low_complexity Low_complexity 1 37 0 541 209 23 47 chr2 241996020 241996149 -11260434 + MIR SINE MIR 1 126 -136 2930 129 29 102 chr2 241996176 241996234 -11260349 - L1MB8 LINE L1 -5 6173 6112 1964 121 0 0 chr2 241996234 241996507 -11260076 + AluSq SINE Alu 7 279 -34 212 0 36 0 chr2 241996509 241996537 -11260046 + (CAAT)n Simple_repeat Simple_repeat 4 32 0 2930 129 29 102 chr2 241996537 241997132 -11259451 - L1MB8 LINE L1 -67 6111 5565 270 145 16 32 chr2 241997247 241997309 -11259274 + L1ME4a LINE L1 6061 6121 0 342 289 237 5 chr2 241997330 241997577 -11259006 + L2 LINE L2 2720 3016 -256 200 274 97 16 chr2 241997614 241997676 -11258907 + L2 LINE L2 3242 3308 -5 379 286 57 0 chr2 241997805 241997910 -11258673 - MIR SINE MIR -3 259 149 1626 152 10 29 chr2 241997911 241998220 -11258363 - AluJb SINE Alu -9 303 1 25 31 0 0 chr2 241998240 241998272 -11258311 + AT_rich Low_complexity Low_complexity 1 32 0 424 113 0 32 chr2 241998323 241998385 -11258198 + MER66A LTR ERV1 281 340 -138 365 270 18 27 chr2 241998940 241999051 -11257532 - MER94 DNA DNA -2 132 23 525 200 9 9 chr2 241999053 241999168 -11257415 + L1MB8 LINE L1 6064 6178 0 2003 105 23 26 chr2 242000533 242000837 -11255746 - AluSx SINE Alu -9 303 1 1926 204 51 31 chr2 242000912 242001362 -11255221 + MLT1C LTR MaLR 1 459 -8 2237 105 0 0 chr2 242001763 242002069 -11254514 - AluSx SINE Alu -6 306 1 494 247 66 48 chr2 242002075 242002346 -11254237 + L1MEd LINE L1 1083 1358 -5014 839 129 53 0 chr2 242002397 242002529 -11254054 + FRAM SINE Alu 8 146 -30 247 116 0 0 chr2 242002541 242002584 -11253999 + L1MB4 LINE L1 6126 6168 -12 457 301 129 22 chr2 242002594 242003024 -11253559 + L1MEd LINE L1 1276 1692 -4692 2301 90 0 0 chr2 242003332 242003631 -11252952 + AluSq SINE Alu 1 299 -14 225 151 41 68 chr2 242003972 242004045 -11252538 + T-rich Low_complexity Low_complexity 3 73 0 260 188 0 0 chr2 242004348 242004396 -11252187 + Alu SINE Alu 259 306 -2 2002 87 0 8 chr2 242004396 242004662 -11251921 + AluSx SINE Alu 6 269 -43 1837 127 57 0 chr2 242004799 242005082 -11251501 - AluSx SINE Alu -13 299 1 680 217 149 3 chr2 242005123 242005348 -11251235 - L1ME3 LINE L1 -208 5954 5699 348 209 132 28 chr2 242005948 242006130 -11250453 - L1ME4a LINE L1 -211 5910 5710 218 215 127 25 chr2 242006245 242006324 -11250259 + MIR SINE MIR 45 131 -77 893 126 0 0 chr2 242006896 242007023 -11249560 + FLAM_C SINE Alu 1 127 -16 2227 98 0 0 chr2 242008613 242008910 -11247673 + AluSg SINE Alu 5 301 -9 1894 158 7 0 chr2 242008922 242009226 -11247357 + AluJb SINE Alu 1 306 -6 299 132 0 0 chr2 242010228 242010281 -11246302 + L1MB2 LINE L1 6072 6124 -47 3951 152 29 32 chr2 242010531 242010838 -11245745 + L1MB2 LINE L1 5409 5715 -456 2118 98 0 36 chr2 242010838 242011145 -11245438 - AluSq SINE Alu -17 296 1 3951 152 29 32 chr2 242011145 242011224 -11245359 + L1MB2 LINE L1 5715 5793 -378 243 61 0 0 chr2 242011224 242011257 -11245326 + (TG)n Simple_repeat Simple_repeat 1 33 0 3951 152 29 32 chr2 242011257 242011627 -11244956 + L1MB2 LINE L1 5793 6164 -7 769 185 0 0 chr2 242012401 242012520 -11244063 + FLAM_C SINE Alu 2 120 -23 29 0 0 0 chr2 242012520 242012549 -11244034 + AT_rich Low_complexity Low_complexity 1 29 0 1977 138 3 0 chr2 242012549 242012853 -11243730 + AluSx SINE Alu 1 305 -7 363 312 35 71 chr2 242012856 242012988 -11243595 + L3 LINE CR1 1399 1525 -52 1620 166 3 33 chr2 242012988 242013181 -11243402 - AluJb SINE Alu -15 297 115 2058 122 0 10 chr2 242013181 242013485 -11243098 + AluSx SINE Alu 1 301 -11 1620 166 3 33 chr2 242013485 242013592 -11242991 - AluJb SINE Alu -197 115 6 363 312 35 71 chr2 242013592 242013629 -11242954 + L3 LINE CR1 1525 1562 -15 318 247 0 25 chr2 242013746 242013827 -11242756 + L2 LINE L2 3183 3261 -52 1945 126 11 28 chr2 242014252 242014610 -11241973 + L1M2 LINE L1 5264 5615 -697 2231 94 0 0 chr2 242014610 242014917 -11241666 + AluSg SINE Alu 1 307 -3 847 142 0 0 chr2 242014924 242015051 -11241532 + FLAM_C SINE Alu 1 127 -6 1712 171 0 11 chr2 242015080 242015367 -11241216 + AluJo SINE Alu 5 288 -24 22 56 0 0 chr2 242015368 242015404 -11241179 + AT_rich Low_complexity Low_complexity 1 36 0 343 247 118 48 chr2 242015592 242015822 -11240761 + L1ME4a LINE L1 5736 5984 -137 1802 214 40 38 chr2 242016252 242016748 -11239835 + MLT1D LTR MaLR 1 497 -8 270 340 70 0 chr2 242016879 242016979 -11239604 + MIR SINE MIR 36 142 -66 1409 167 44 51 chr2 242017004 242017298 -11239285 - AluJo SINE Alu -20 292 1 465 255 193 58 chr2 242017336 242017753 -11238830 + L2 LINE L2 2631 3134 -179 252 180 20 0 chr2 242017762 242017812 -11238771 + L2 LINE L2 3246 3296 -17 308 209 91 55 chr2 242017838 242017948 -11238635 - L2 LINE L2 -186 3127 3014 517 299 151 39 chr2 242017982 242018190 -11238393 - L2 LINE L2 -370 2944 2761 1633 121 21 114 chr2 242018190 242018400 -11238183 - AluJo SINE Alu 0 302 133 2265 101 0 0 chr2 242018400 242018706 -11237877 - AluSq SINE Alu -7 306 1 1633 121 21 114 chr2 242018706 242018827 -11237756 - AluJo SINE Alu -169 133 2 640 65 43 0 chr2 242018735 242018828 -11237755 - AluJ/FLAM SINE Alu -215 97 1 517 299 151 39 chr2 242018828 242019213 -11237370 - L2 LINE L2 -554 2760 2283 2516 97 78 18 chr2 242019213 242019595 -11236988 - LTR19B LTR ERV1 0 580 176 357 143 48 0 chr2 242019591 242019654 -11236929 + LTR19A LTR ERV1 421 486 0 * 180 167 0 0 chr2 242019654 242019684 -11236899 - L2 LINE L2 -1027 2287 2258 2152 142 3 0 chr2 242019762 242020064 -11236519 + AluJb SINE Alu 1 303 -9 880 292 198 36 chr2 242020064 242020084 -11236499 - L2 LINE L2 -1912 1402 1387 2369 110 7 0 chr2 242020084 242020394 -11236189 + AluSx SINE Alu 1 312 0 880 292 198 36 chr2 242020394 242021232 -11235351 - L2 LINE L2 -1927 1387 405 1300 117 0 0 chr2 242021526 242021697 -11234886 - AluSg/x SINE Alu -8 304 134 2074 112 35 3 chr2 242021697 242021982 -11234601 - AluSq SINE Alu -18 295 2 211 314 98 29 chr2 242021998 242022100 -11234483 + L2 LINE L2 3163 3271 -1 291 302 147 0 chr2 242022176 242022292 -11234291 + L2 LINE L2 2922 3054 -259 2408 94 0 7 chr2 242022385 242022692 -11233891 + AluSx SINE Alu 1 305 -7 382 272 128 28 chr2 242022721 242022901 -11233682 - MIR SINE MIR -1 261 64 384 244 89 39 chr2 242022921 242023101 -11233482 + MER5A DNA MER1_type 1 189 0 1096 109 33 0 chr2 242024294 242024477 -11232106 - L1MB2 LINE L1 -7 6164 5976 354 208 13 26 chr2 242024489 242024566 -11232017 + L1ME4a LINE L1 6035 6110 -11 294 264 16 124 chr2 242025262 242025312 -11231271 - MIR SINE MIR -59 149 95 2352 84 0 7 chr2 242025312 242025609 -11230974 + AluSx SINE Alu 1 295 -17 294 264 16 124 chr2 242025609 242025687 -11230896 - MIR SINE MIR -113 95 35 426 139 0 0 chr2 242026952 242027024 -11229559 + (CA)n Simple_repeat Simple_repeat 2 73 0 2073 119 33 13 chr2 242028396 242028698 -11227885 + AluJb SINE Alu 1 308 -4 741 176 0 0 chr2 242028795 242028920 -11227663 + MER45A DNA AcHobo 40 164 -14 234 0 0 0 chr2 242029008 242029034 -11227549 + (CA)n Simple_repeat Simple_repeat 2 27 0 288 250 13 0 chr2 242030115 242030191 -11226392 - HsTC2 DNA Tc2 -7 1891 1815 2152 133 13 0 chr2 242030221 242030522 -11226061 + AluSx SINE Alu 6 310 -2 396 239 67 1 chr2 242030689 242030829 -11225754 + MIR SINE MIR 4 151 -57 235 111 0 0 chr2 242031674 242031710 -11224873 - MIR SINE MIR -118 144 109 190 345 46 0 chr2 242032475 242032562 -11224021 - MER5A DNA MER1_type -49 140 50 338 314 88 0 chr2 242032652 242032789 -11223794 + MIR SINE MIR 106 254 -8 353 170 20 20 chr2 242033225 242033325 -11223258 + (CA)n Simple_repeat Simple_repeat 2 101 0 329 357 81 11 chr2 242034477 242034662 -11221921 + MIR SINE MIR 22 219 -43 2042 119 35 32 chr2 242035473 242035785 -11220798 - AluSq SINE Alu 0 313 1 292 200 0 0 chr2 242035800 242035865 -11220718 - L1MC4 LINE L1 -1 8041 7977 298 163 0 0 chr2 242035878 242035927 -11220656 - L1MC4 LINE L1 -159 7883 7835 480 243 95 27 chr2 242036030 242036178 -11220405 - MER97a DNA MER1_type? -716 178 21 1948 137 7 0 chr2 242036550 242036862 -11219721 - AluJb SINE Alu 0 322 9 309 336 53 0 chr2 242036864 242036977 -11219606 - LTR67 LTR ERVL -5 552 434 1974 138 7 14 chr2 242037479 242037776 -11218807 - AluJb SINE Alu -17 295 1 1666 180 49 175 chr2 242037781 242038222 -11218361 - L1MC4 LINE L1 -828 7214 6719 1796 181 0 0 chr2 242038222 242038510 -11218073 + AluJb SINE Alu 17 304 -8 2206 100 7 3 chr2 242038510 242038799 -11217784 + AluSq SINE Alu 1 290 -23 1666 180 49 175 chr2 242038799 242039019 -11217564 - L1MC4 LINE L1 -1322 6720 6656 1526 127 24 133 chr2 242039019 242039214 -11217369 - AluYb8 SINE Alu -6 302 158 4427 80 39 48 chr2 242039214 242039838 -11216745 - SVA Other Other -1 1385 768 1526 127 24 133 chr2 242039838 242039981 -11216602 - AluYb8 SINE Alu -150 158 1 1666 180 49 175 chr2 242039981 242040073 -11216510 - L1MC4 LINE L1 -1386 6656 6554 307 358 79 31 chr2 242040283 242040428 -11216155 + L1ME LINE L1 5511 5672 -449 1701 132 95 15 chr2 242040428 242040701 -11215882 + AluSx SINE Alu 1 295 -17 307 358 79 31 chr2 242040701 242040784 -11215799 + L1ME LINE L1 5672 5750 -371 1358 140 25 0 chr2 242041295 242041529 -11215054 - AluSg/x SINE Alu 0 310 84 1981 142 7 0 chr2 242041531 242041697 -11214886 - AluJb SINE Alu -11 301 131 2202 65 0 0 chr2 242041697 242041990 -11214593 - AluY SINE Alu 0 311 40 1981 142 7 0 chr2 242041990 242042104 -11214479 - AluJb SINE Alu -181 131 19 1378 162 0 0 chr2 242042114 242042342 -11214241 + Tigger2 DNA MER2_type 2491 2718 0 968 68 0 0 chr2 242042361 242042478 -11214105 + AluY SINE Alu 175 291 -20 744 205 39 0 chr2 242042877 242043033 -11213550 + MLT1F LTR MaLR 5 166 -376 4443 150 33 27 chr2 242043039 242043898 -11212685 + L1MB3 LINE L1 5319 6182 -1 1580 159 137 26 chr2 242043907 242044258 -11212325 + MLT1F LTR MaLR 152 541 -1 2713 178 68 32 chr2 242044258 242044819 -11211764 + L1MB8 LINE L1 5526 6114 -64 2404 98 3 0 chr2 242044819 242045126 -11211457 + AluSp SINE Alu 1 308 -5 2713 178 68 32 chr2 242045126 242045193 -11211390 + L1MB8 LINE L1 6114 6177 -1 1895 134 88 0 chr2 242045197 242045481 -11211102 + AluSx SINE Alu 3 311 -1 2207 80 0 80 chr2 242045618 242045786 -11210797 - AluY SINE Alu -10 301 170 2517 71 0 0 chr2 242045786 242046083 -11210500 - AluY SINE Alu -14 297 1 2207 80 0 80 chr2 242046083 242046241 -11210342 - AluY SINE Alu -141 170 1 1925 182 20 23 chr2 242046921 242047312 -11209271 - MLT1B LTR MaLR 0 390 1 1889 140 0 88 chr2 242047774 242047979 -11208604 - AluSx SINE Alu 0 312 145 2522 74 0 13 chr2 242047979 242048290 -11208293 - AluY SINE Alu -4 307 1 1889 140 0 88 chr2 242048290 242048412 -11208171 - AluSx SINE Alu -167 145 14 1046 119 137 107 chr2 242048416 242048510 -11208073 + MLT2C1 LTR ERVL 28 118 -279 1881 164 0 20 chr2 242048510 242048848 -11207735 - AluJb SINE Alu 0 312 1 1046 119 137 107 chr2 242048848 242049023 -11207560 + MLT2C1 LTR ERVL 118 268 -129 2136 153 0 0 chr2 242049023 242049323 -11207260 + AluSx SINE Alu 1 300 -12 1046 119 137 107 chr2 242049323 242049400 -11207183 + MLT2C1 LTR ERVL 268 341 -56 223 280 0 0 chr2 242049401 242049451 -11207132 + (CATATA)n Simple_repeat Simple_repeat 4 53 0 196 281 88 42 chr2 242049884 242050076 -11206507 + L2 LINE L2 2857 3057 -215 369 204 26 106 chr2 242050157 242050270 -11206313 + MLT1J LTR MaLR 235 338 -173 220 288 169 8 chr2 242050337 242050455 -11206128 + L2 LINE L2 3136 3272 0 682 191 8 0 chr2 242051179 242051310 -11205273 + FAM SINE Alu 1 49 0 2355 108 0 0 chr2 242051316 242051613 -11204970 + AluSq SINE Alu 1 297 -16 2541 72 3 7 chr2 242051613 242051920 -11204663 + AluSp SINE Alu 1 306 -7 702 151 79 0 chr2 242051926 242052052 -11204531 + AluJb SINE Alu 1 136 -176 555 276 0 65 chr2 242052100 242052285 -11204298 + MLT1J LTR MaLR 228 400 -111 389 259 86 49 chr2 242052420 242052582 -11204001 - MLT1I LTR MaLR -230 179 12 2369 106 3 0 chr2 242052595 242052906 -11203677 + AluSp SINE Alu 1 312 -1 2163 136 3 0 chr2 242052915 242053225 -11203358 + AluSq SINE Alu 3 313 0 1536 147 70 86 chr2 242053370 242053684 -11202899 - AluJo SINE Alu -3 309 1 344 230 27 0 chr2 242053704 242053778 -11202805 + MIR SINE MIR 186 261 -1 461 267 119 76 chr2 242053864 242054433 -11202150 - L1MEd LINE L1 -4934 1185 592 1819 159 44 29 chr2 242054807 242054972 -11201611 + MLT1B LTR MaLR 2 163 -227 2243 132 0 3 chr2 242054972 242055276 -11201307 + AluSx SINE Alu 1 303 -9 1819 159 44 29 chr2 242055276 242055493 -11201090 + MLT1B LTR MaLR 163 390 0 1536 184 28 28 chr2 242056506 242056812 -11199771 + AluJb SINE Alu 1 306 0 2373 98 7 3 chr2 242056813 242057118 -11199465 + AluSq SINE Alu 1 306 -7 1362 111 0 0 chr2 242057118 242057298 -11199285 + AluSp SINE Alu 134 313 0 2357 97 3 3 chr2 242057658 242057969 -11198614 - AluSx SINE Alu -1 311 1 321 326 67 6 chr2 242058854 242059032 -11197551 - MER5A DNA MER1_type 0 189 1 342 282 174 0 chr2 242059055 242059250 -11197333 + MIR SINE MIR 32 260 -2 2718 26 23 0 chr2 242059345 242059653 -11196930 + AluYb8 SINE Alu 1 315 -3 2364 101 0 13 chr2 242059680 242059996 -11196587 + AluSx SINE Alu 1 312 0 182 62 31 0 chr2 242060004 242060036 -11196547 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 1797 163 3 37 chr2 242060050 242060350 -11196233 + AluSg SINE Alu 1 290 -20 2435 88 23 0 chr2 242060758 242061064 -11195519 + AluSp SINE Alu 1 313 0 1082 82 0 0 chr2 242061071 242061205 -11195378 + AluSx SINE Alu 1 134 -178 435 19 0 0 chr2 242061759 242061811 -11194772 + (TAA)n Simple_repeat Simple_repeat 1 52 0 2248 113 3 0 chr2 242061812 242062143 -11194440 + AluSx SINE Alu 1 312 0 1206 128 0 17 chr2 242062145 242062324 -11194259 + AluSx SINE Alu 134 309 -1 366 206 0 0 chr2 242062327 242062395 -11194188 + MLT1I LTR MaLR 321 388 -21 32 0 0 0 chr2 242062477 242062509 -11194074 + AT_rich Low_complexity Low_complexity 1 32 0 2064 110 0 10 chr2 242062509 242062799 -11193784 - AluSg SINE Alu 0 310 24 2405 98 0 0 chr2 242062801 242063097 -11193486 - AluSq SINE Alu -17 296 1 350 250 65 40 chr2 242063159 242063283 -11193300 + L1ME4a LINE L1 5831 5957 -164 236 119 0 0 chr2 242063320 242063362 -11193221 - AluSx SINE Alu -4 298 257 1527 108 0 0 chr2 242063363 242063557 -11193026 - AluSx SINE Alu -117 195 2 368 294 46 20 chr2 242063617 242063770 -11192813 + L1ME4a LINE L1 5963 6119 -2 2237 107 3 0 chr2 242064018 242064308 -11192275 + AluSq SINE Alu 1 291 -22 684 174 21 7 chr2 242064404 242064548 -11192035 + L1MB5 LINE L1 6008 6153 -21 2150 125 7 0 chr2 242065378 242065674 -11190909 - AluSq SINE Alu -11 302 5 2284 110 0 3 chr2 242065766 242066066 -11190517 + AluSx SINE Alu 1 299 -13 472 219 112 140 chr2 242066101 242066160 -11190423 - MLT1H LTR MaLR -1 548 489 2009 118 10 27 chr2 242066160 242066456 -11190127 + AluSx SINE Alu 1 291 -21 282 56 0 0 chr2 242066461 242066497 -11190086 + (TTA)n Simple_repeat Simple_repeat 3 38 0 472 219 112 140 chr2 242066497 242066525 -11190058 - MLT1H LTR MaLR -64 485 458 2848 157 2 38 chr2 242066525 242066562 -11190021 - MER66B LTR ERV1 0 486 449 2632 65 0 0 chr2 242066562 242066868 -11189715 + AluY SINE Alu 1 306 -5 2848 157 2 38 chr2 242066868 242067101 -11189482 - MER66B LTR ERV1 -37 449 240 2330 114 0 0 chr2 242067101 242067400 -11189183 + AluSc SINE Alu 1 299 -10 2848 157 2 38 chr2 242067400 242067632 -11188951 - MER66B LTR ERV1 -246 240 1 472 219 112 140 chr2 242067632 242068029 -11188554 - MLT1H LTR MaLR -91 458 71 1801 162 3 7 chr2 242068053 242068356 -11188227 + AluJb SINE Alu 1 290 -22 2008 168 45 18 chr2 242068538 242068918 -11187665 + MLT1B LTR MaLR 1 390 0 465 228 43 62 chr2 242068923 242069085 -11187498 - MER103 DNA DNA -1 165 7 2051 130 0 16 chr2 242069089 242069405 -11187178 - AluSx SINE Alu -1 311 1 488 168 87 75 chr2 242069421 242069594 -11186989 - MLT1D LTR MaLR -287 189 6 2327 67 251 3 chr2 242070896 242071255 -11185328 + LTR7 LTR ERV1 1 448 -2 4470 143 23 37 chr2 242071557 242071599 -11184984 - MER4D LTR ERV1 -8 895 854 2503 50 0 0 chr2 242071599 242071897 -11184686 + AluY SINE Alu 1 298 -13 4470 143 23 37 chr2 242071897 242072138 -11184445 - MER4D LTR ERV1 -49 854 611 2143 119 3 0 chr2 242072138 242072441 -11184142 - AluSx SINE Alu -8 304 1 4470 143 23 37 chr2 242072441 242072595 -11183988 - MER4D LTR ERV1 -292 611 456 2216 108 0 0 chr2 242072595 242072892 -11183691 - AluSq SINE Alu -16 297 1 4470 143 23 37 chr2 242072892 242073360 -11183223 - MER4D LTR ERV1 -447 456 1 231 305 63 5 chr2 242073918 242074108 -11182475 - L1M4 LINE L1 -748 5398 5198 243 0 0 0 chr2 242074121 242074148 -11182435 + (T)n Simple_repeat Simple_repeat 1 27 0 2242 119 3 0 chr2 242074184 242074495 -11182088 + AluSx SINE Alu 1 312 0 360 111 0 0 chr2 242074543 242074597 -11181986 + (TC)n Simple_repeat Simple_repeat 1 54 0 362 103 0 175 chr2 242075873 242075932 -11180651 + MIR SINE MIR 108 145 -117 2079 145 7 0 chr2 242075932 242076242 -11180341 + AluSx SINE Alu 1 312 0 362 103 0 175 chr2 242076242 242076279 -11180304 + MIR SINE MIR 145 187 -75 665 237 169 60 chr2 242076343 242076572 -11180011 - MLT1B LTR MaLR -2 388 107 2083 128 7 0 chr2 242076572 242076876 -11179707 - AluSp SINE Alu -5 308 3 665 237 169 60 chr2 242076876 242076996 -11179587 - MLT1B LTR MaLR -283 107 1 309 301 122 33 chr2 242077371 242077584 -11178999 - MLT1L LTR MaLR -8 607 376 7993 54 9 0 chr2 242078146 242079106 -11177477 + LTR5 LTR ERVK 1 969 0 2306 62 0 10 chr2 242079401 242079689 -11176894 - AluY SINE Alu -15 296 12 612 132 11 0 chr2 242079732 242079823 -11176760 + FLAM_C SINE Alu 24 115 -28 458 289 21 21 chr2 242079830 242079972 -11176611 + MIR SINE MIR 81 222 -40 965 149 0 11 chr2 242080207 242080335 -11176248 + (CAT)n Simple_repeat Simple_repeat 1 128 -51 2243 78 3 7 chr2 242080335 242080630 -11175953 - AluSp SINE Alu -18 295 2 965 149 0 11 chr2 242080630 242080682 -11175901 + (CAT)n Simple_repeat Simple_repeat 128 179 0 1176 117 0 8 chr2 242080659 242081238 -11175345 + (CACCAT)n Simple_repeat Simple_repeat 1 574 0 464 252 162 44 chr2 242081327 242081592 -11174991 - MER21B LTR ERV1 -103 760 449 2240 124 0 0 chr2 242081592 242081899 -11174684 + AluSx SINE Alu 1 307 -5 464 252 162 44 chr2 242081899 242081954 -11174629 - MER21B LTR ERV1 -414 449 402 566 139 0 10 chr2 242081954 242082055 -11174528 + (GAA)n Simple_repeat Simple_repeat 2 101 0 567 241 82 98 chr2 242082055 242082383 -11174200 - MER21B LTR ERV1 -451 412 90 716 219 56 19 chr2 242082433 242082470 -11174113 + FAM SINE Alu 9 43 -278 4533 96 40 52 chr2 242082470 242083168 -11173415 + LTR8 LTR ERV1 1 690 -1 716 219 56 19 chr2 242083168 242083290 -11173293 + FAM SINE Alu 43 174 -11 2148 88 32 0 chr2 242083324 242083609 -11172974 + AluSx SINE Alu 1 294 -18 226 135 173 0 chr2 242083614 242083666 -11172917 + AluS SINE Alu 1 61 -239 666 213 8 0 chr2 242083666 242083793 -11172790 + AluSg/x SINE Alu 171 298 -14 322 227 0 0 chr2 242083793 242083859 -11172724 - MER21B LTR ERV1 -792 71 6 705 231 19 0 chr2 242083865 242084025 -11172558 - MIR SINE MIR -98 164 2 322 184 229 0 chr2 242084188 242084297 -11172286 + MER63A DNA MER1_type 50 183 -27 284 253 44 0 chr2 242084652 242084743 -11171840 - L1MEd LINE L1 -5966 153 59 2390 78 3 0 chr2 242084886 242085193 -11171390 - AluSx SINE Alu -4 308 1 426 234 23 70 chr2 242085320 242085491 -11171092 + MLT1K LTR MaLR 14 176 -412 502 296 101 44 chr2 242085538 242085856 -11170727 + MLT1K LTR MaLR 251 586 -2 921 187 7 0 chr2 242085902 242086057 -11170526 - FRAM SINE Alu -9 157 2 1317 206 77 21 chr2 242086063 242086375 -11170208 - AluSq SINE Alu 0 303 1 981 194 0 0 chr2 242086375 242086530 -11170053 - FRAM SINE Alu -11 155 1 2040 110 0 39 chr2 242086689 242086998 -11169585 + AluSq SINE Alu 1 297 -16 1372 90 0 0 chr2 242086998 242087176 -11169407 + AluSg/x SINE Alu 134 311 -1 2102 129 0 7 chr2 242087747 242088049 -11168534 + AluSx SINE Alu 1 300 -12 2321 81 3 0 chr2 242088049 242088343 -11168240 + AluSp SINE Alu 1 296 -17 22 35 0 0 chr2 242088455 242088484 -11168099 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr2 242088554 242088582 -11168001 + AT_rich Low_complexity Low_complexity 1 28 0 2150 103 14 0 chr2 242088689 242088981 -11167602 - AluSp SINE Alu -17 296 1 199 281 24 12 chr2 242088981 242089057 -11167526 + L3 LINE CR1 792 868 -709 1924 155 10 0 chr2 242089166 242089470 -11167113 + AluJo SINE Alu 1 307 -5 529 149 0 19 chr2 242089472 242089579 -11167004 + (GGGAA)n Simple_repeat Simple_repeat 1 105 0 333 197 0 16 chr2 242089580 242089641 -11166942 + polypurine Low_complexity Low_complexity 4 63 0 397 165 61 17 chr2 242089641 242089730 -11166853 + L1MA9 LINE L1 6163 6260 -52 2221 95 3 0 chr2 242089730 242090024 -11166559 + AluSg SINE Alu 1 295 -15 397 165 61 17 chr2 242090024 242090049 -11166534 + L1MA9 LINE L1 6260 6282 -30 318 156 47 0 chr2 242090139 242090203 -11166380 + MIR SINE MIR 86 152 -110 201 250 0 19 chr2 242090264 242090316 -11166267 + L3 LINE CR1 1445 1495 -82 743 236 42 90 chr2 242090331 242090755 -11165828 - MLT1J LTR MaLR -8 503 100 861 147 45 6 chr2 242090803 242090980 -11165603 - LTR54 LTR ERV1 0 510 327 1292 169 33 0 chr2 242090980 242091193 -11165390 + AluJo SINE Alu 1 220 -92 230 180 0 115 chr2 242091201 242091262 -11165321 - LTR54 LTR ERV1 -272 238 185 1337 184 73 11 chr2 242091262 242091523 -11165060 + AluJb SINE Alu 23 299 -13 838 119 0 4 chr2 242091525 242091745 -11164838 + AluSx SINE Alu 3 309 -3 554 211 0 18 chr2 242091784 242091898 -11164685 - LTR54 LTR ERV1 -398 112 1 1942 137 0 33 chr2 242092403 242092710 -11163873 - AluJo SINE Alu -15 297 1 440 319 102 8 chr2 242092741 242092976 -11163607 + MIR SINE MIR 4 260 -2 2389 70 3 3 chr2 242093042 242093343 -11163240 - AluSp SINE Alu -12 301 1 2117 117 10 0 chr2 242093619 242093919 -11162664 - AluSx SINE Alu -9 303 1 341 364 169 5 chr2 242096009 242096204 -11160379 + MIR SINE MIR 36 262 0 493 236 9 0 chr2 242096256 242096362 -11160221 + MER81 DNA DNA 8 114 0 277 343 29 0 chr2 242096483 242096623 -11159960 - MER91A DNA MER1_type -52 144 1 567 244 154 29 chr2 242096659 242096775 -11159808 + MER102b DNA MER1_type 1 101 -1327 2128 119 0 10 chr2 242096775 242097077 -11159506 + AluSx SINE Alu 1 299 -13 567 244 154 29 chr2 242097077 242097239 -11159344 + MER102b DNA MER1_type 101 314 -27 1750 106 67 14 chr2 242097340 242097622 -11158961 - AluSx SINE Alu -15 297 1 2270 98 0 0 chr2 242097914 242098210 -11158373 - AluSx SINE Alu -16 296 1 2296 97 3 0 chr2 242098230 242098540 -11158043 - AluSx SINE Alu -1 311 1 312 267 27 0 chr2 242098540 242098615 -11157968 - L2 LINE L2 -10 3303 3227 331 306 25 13 chr2 242098802 242098959 -11157624 - MLT1K LTR MaLR -272 316 158 698 228 163 5 chr2 242099017 242099219 -11157364 + MIR SINE MIR 8 241 -21 777 157 14 0 chr2 242099704 242099844 -11156739 - FLAM_C SINE Alu 0 143 2 2252 72 28 3 chr2 242099872 242100163 -11156420 + AluSq SINE Alu 1 298 -15 876 225 93 69 chr2 242100843 242101275 -11155308 + MER34B LTR ERV1 10 431 -111 234 186 0 0 chr2 242101282 242101325 -11155258 + MER57A LTR ERV1 295 337 -66 2053 148 0 0 chr2 242101387 242101691 -11154892 - AluSx SINE Alu 0 312 9 376 185 22 0 chr2 242101702 242101794 -11154789 + MER34 LTR ERV1 449 542 0 706 270 171 14 chr2 242102323 242102686 -11153897 + LTR16A LTR ERVL 22 441 -9 21 0 0 0 chr2 242102872 242102893 -11153690 + AT_rich Low_complexity Low_complexity 1 21 0 1685 145 14 17 chr2 242103279 242103598 -11152985 + AluJo SINE Alu 5 312 0 2255 103 3 0 chr2 242103975 242104276 -11152307 - AluSx SINE Alu -9 303 2 404 344 68 23 chr2 242104364 242104716 -11151867 - MLT1K LTR MaLR 0 588 221 304 130 54 0 chr2 242106100 242106192 -11150391 + (CCCGG)n Simple_repeat Simple_repeat 4 100 0 25 0 0 0 chr2 242106450 242106475 -11150108 + GC_rich Low_complexity Low_complexity 1 25 0 220 354 63 0 chr2 242107544 242107623 -11148960 - MIR SINE MIR -96 166 83 653 186 102 113 chr2 242107711 242107786 -11148797 - MER45A DNA AcHobo -1403 178 104 2081 128 7 3 chr2 242107786 242108090 -11148493 + AluSx SINE Alu 1 305 -7 2250 107 0 0 chr2 242108099 242108397 -11148186 + AluSx SINE Alu 1 298 -14 653 186 102 113 chr2 242108397 242108488 -11148095 - MER45A DNA AcHobo -1485 96 4 661 212 93 124 chr2 242109150 242109363 -11147220 + LTR16A LTR ERVL 63 261 -189 2327 80 0 0 chr2 242109363 242109675 -11146908 + AluSx SINE Alu 3 314 0 661 212 93 124 chr2 242109675 242109856 -11146727 + LTR16A LTR ERVL 261 446 -4 540 325 118 46 chr2 242109929 242110351 -11146232 - L2 LINE L2 -2 3311 2812 1818 136 47 20 chr2 242110351 242110652 -11145931 + AluSx SINE Alu 1 309 -3 540 325 118 46 chr2 242110652 242110755 -11145828 - L2 LINE L2 -501 2812 2718 2333 83 10 0 chr2 242110758 242111060 -11145523 - AluSp SINE Alu -7 306 2 813 131 22 51 chr2 242111230 242111367 -11145216 - FLAM_A SINE Alu 0 133 1 207 0 0 0 chr2 242111530 242111553 -11145030 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 1808 127 0 8 chr2 242111562 242111829 -11144754 - AluSq SINE Alu -48 265 1 633 196 171 0 chr2 242111843 242112001 -11144582 + MER5A DNA MER1_type 4 188 -1 2206 86 3 0 chr2 242112271 242112563 -11144020 + AluSx SINE Alu 9 301 -11 674 269 76 31 chr2 242112611 242112834 -11143749 + MIR SINE MIR 29 261 -1 320 268 89 57 chr2 242113472 242113595 -11142988 - MIR SINE MIR -29 233 107 356 295 114 27 chr2 242114374 242114523 -11142060 - MIR SINE MIR -58 204 43 199 229 42 0 chr2 242115000 242115048 -11141535 - MIR3 SINE MIR -11 197 148 21 71 0 0 chr2 242116249 242116291 -11140292 + GC_rich Low_complexity Low_complexity 1 42 0 2287 75 0 3 chr2 242117180 242117474 -11139109 + AluSg SINE Alu 1 293 -17 2196 65 39 3 chr2 242117477 242117789 -11138794 + AluSp SINE Alu 1 292 -21 1709 154 11 4 chr2 242118471 242118751 -11137832 - AluJb SINE Alu -14 298 17 843 231 118 0 chr2 242118938 242119167 -11137416 - MIR SINE MIR 0 262 7 861 206 101 17 chr2 242119650 242120051 -11136532 + MLT1E LTR MaLR 2 524 -69 2324 84 10 0 chr2 242120051 242120359 -11136224 + AluSx SINE Alu 1 311 -1 2186 94 0 23 chr2 242120381 242120688 -11135895 + AluSg SINE Alu 1 300 -10 2445 74 0 0 chr2 242120688 242120999 -11135584 + AluY SINE Alu 1 311 0 658 234 0 0 chr2 242121044 242121172 -11135411 - FLAM_A SINE Alu -1 132 5 296 232 0 14 chr2 242121176 242121245 -11135338 + MLT1E LTR MaLR 526 593 0 835 150 0 8 chr2 242121415 242121548 -11135035 + FLAM_C SINE Alu 12 143 0 268 330 59 8 chr2 242121877 242121995 -11134588 - L2 LINE L2 -2 3270 3147 1999 80 83 14 chr2 242123480 242123769 -11132814 - AluSg SINE Alu -1 309 1 690 204 23 0 chr2 242123789 242123921 -11132662 - AluJo SINE Alu -177 135 1 1694 126 48 0 chr2 242124239 242124508 -11132075 + AluSx SINE Alu 28 309 -3 1523 190 0 21 chr2 242124553 242124843 -11131740 + AluJb SINE Alu 13 296 -16 1784 147 14 3 chr2 242124843 242125135 -11131448 + AluSx SINE Alu 1 295 -17 525 84 14 0 chr2 242125135 242125206 -11131377 - AluJ/FLAM SINE Alu -235 77 6 2209 106 0 0 chr2 242125265 242125557 -11131026 - AluSc SINE Alu -17 292 1 2343 76 0 0 chr2 242125567 242125868 -11130715 - AluSx SINE Alu -11 301 1 2161 108 0 3 chr2 242126099 242126396 -11130187 + AluSx SINE Alu 1 296 -16 2026 111 34 3 chr2 242126404 242126702 -11129881 - AluSg SINE Alu -2 308 2 2201 104 0 0 chr2 242127379 242127677 -11128906 + AluSg SINE Alu 1 298 -12 2232 70 0 11 chr2 242128199 242128532 -11128051 - AluSq SINE Alu 0 332 3 1766 156 19 10 chr2 242128539 242128847 -11127736 - AluJb SINE Alu -1 311 1 1188 131 0 0 chr2 242128886 242129054 -11127529 + AluJb SINE Alu 130 297 -15 1441 168 34 31 chr2 242129674 242129965 -11126618 - AluJb SINE Alu -20 292 1 247 156 0 10 chr2 242129992 242130063 -11126520 + Alu SINE Alu 2 148 -18 24 32 0 0 chr2 242130075 242130106 -11126477 + AT_rich Low_complexity Low_complexity 1 31 0 2272 58 41 0 chr2 242130133 242130427 -11126156 + AluY SINE Alu 1 306 -5 1968 113 0 33 chr2 242130428 242130728 -11125855 + AluSx SINE Alu 9 298 -14 739 170 7 37 chr2 242130766 242130901 -11125682 + FLAM_A SINE Alu 1 131 -2 2389 48 0 45 chr2 242130954 242131266 -11125317 - AluY SINE Alu -13 298 1 1576 149 3 48 chr2 242131268 242131353 -11125230 - AluJb SINE Alu -30 282 195 2192 102 0 7 chr2 242131353 242131658 -11124925 + AluY SINE Alu 1 303 -8 1576 149 3 48 chr2 242131658 242131867 -11124716 - AluJb SINE Alu -117 195 1 256 304 25 37 chr2 242131985 242132146 -11124437 + L1MC/D LINE L1 5678 5836 -1972 2013 148 0 0 chr2 242132150 242132460 -11124123 + AluSg SINE Alu 1 310 0 1099 113 0 6 chr2 242132464 242132624 -11123959 + AluJb SINE Alu 1 159 -153 724 116 0 45 chr2 242132624 242132736 -11123847 - FLAM_A SINE Alu -14 128 22 910 105 6 68 chr2 242132739 242132901 -11123682 + AluSg/x SINE Alu 161 312 0 2112 95 3 13 chr2 242133166 242133472 -11123111 + AluSx SINE Alu 1 303 -9 2289 191 61 35 chr2 242133552 242133932 -11122651 + MLT1D LTR MaLR 1 398 -107 1752 138 0 4 chr2 242133932 242134200 -11122383 - AluJb SINE Alu -45 267 1 2289 191 61 35 chr2 242134200 242134311 -11122272 + MLT1D LTR MaLR 398 505 0 215 348 0 9 chr2 242135080 242135195 -11121388 + (TG)n Simple_repeat Simple_repeat 2 115 0 355 219 8 8 chr2 242135231 242135354 -11121229 + (TG)n Simple_repeat Simple_repeat 1 123 0 1301 120 106 80 chr2 242135536 242135810 -11120773 + AluJb SINE Alu 6 286 -26 443 117 0 13 chr2 242135822 242135899 -11120684 + (GAAA)n Simple_repeat Simple_repeat 4 79 0 791 34 0 34 chr2 242135900 242136019 -11120564 + (GGGGA)n Simple_repeat Simple_repeat 1 115 0 276 292 65 12 chr2 242136890 242137087 -11119496 - L1ME LINE L1 -393 5728 5514 273 273 39 39 chr2 242137103 242137257 -11119326 - L1ME LINE L1 -2340 5468 5315 2238 106 0 0 chr2 242137270 242137573 -11119010 - AluSq SINE Alu -10 303 1 2439 69 3 0 chr2 242137582 242137887 -11118696 - AluSq SINE Alu -7 306 1 479 83 0 0 chr2 242137914 242137974 -11118609 + Alu SINE Alu 2 61 -257 2106 101 3 19 chr2 242137989 242138296 -11118287 + AluSg SINE Alu 2 303 -7 1843 120 47 0 chr2 242138299 242138573 -11118010 + AluJb SINE Alu 1 287 -25 1946 140 3 7 chr2 242138593 242138900 -11117683 + AluJo SINE Alu 1 306 -6 209 269 0 19 chr2 242139172 242139224 -11117359 + GA-rich Low_complexity Low_complexity 4 54 0 226 274 0 0 chr2 242139372 242139423 -11117160 + MER34 LTR ERV1 1 51 -491 566 208 24 113 chr2 242139436 242139699 -11116884 + MER39 LTR ERV1 167 533 -174 1995 125 3 0 chr2 242139710 242140007 -11116576 + AluSg SINE Alu 1 298 -12 1550 179 21 14 chr2 242140018 242140297 -11116286 + AluJb SINE Alu 1 281 -31 318 159 0 0 chr2 242140301 242140370 -11116213 + (CA)n Simple_repeat Simple_repeat 2 70 0 1803 155 7 7 chr2 242140472 242140782 -11115801 - AluSx SINE Alu -2 310 1 463 121 24 12 chr2 242140782 242140865 -11115718 - LTR56 LTR ERV1 -361 84 1 292 206 55 14 chr2 242140865 242140932 -11115651 + MER34 LTR ERV1 375 444 -98 1421 64 5 35 chr2 242140950 242141012 -11115571 - AluSq SINE Alu -117 196 134 2331 77 3 0 chr2 242141012 242141310 -11115273 - AluSp SINE Alu -14 299 1 1421 64 5 35 chr2 242141310 242141449 -11115134 - AluSq SINE Alu -179 134 1 2267 110 0 0 chr2 242141550 242141860 -11114723 + AluSq SINE Alu 3 312 -1 234 0 0 0 chr2 242142524 242142550 -11114033 + (TG)n Simple_repeat Simple_repeat 1 26 0 2190 104 0 3 chr2 242142722 242143021 -11113562 - AluSx SINE Alu -14 298 1 987 148 0 60 chr2 242143031 242143214 -11113369 - AluSp SINE Alu -13 300 129 2425 30 40 7 chr2 242143217 242143517 -11113066 - AluY SINE Alu 0 311 2 1436 141 100 7 chr2 242143678 242143947 -11112636 - AluJo SINE Alu -18 294 1 23 54 0 0 chr2 242143955 242143992 -11112591 + AT_rich Low_complexity Low_complexity 1 37 0 253 154 0 0 chr2 242144916 242144955 -11111628 + LTR23 LTR ERV1 321 359 -78 1132 159 5 5 chr2 242144989 242145178 -11111405 + AluJo SINE Alu 23 211 -101 520 91 0 0 chr2 242145221 242145287 -11111296 + AluJo SINE Alu 219 284 -28 1950 132 0 10 chr2 242145371 242145682 -11110901 + AluJb SINE Alu 2 309 -3 382 295 191 16 chr2 242145709 242145960 -11110623 + L2 LINE L2 3001 3295 -18 373 310 240 5 chr2 242145927 242146127 -11110456 - MIR SINE MIR -3 259 13 * 646 175 0 0 chr2 242146345 242146448 -11110135 + Tigger5 DNA MER2_type 27 129 -2194 358 139 25 13 chr2 242146530 242146582 -11110001 + CT-rich Low_complexity Low_complexity 1 56 -24 2019 125 0 22 chr2 242146582 242146901 -11109682 - AluSx SINE Alu 0 312 1 358 139 25 13 chr2 242146901 242146927 -11109656 + CT-rich Low_complexity Low_complexity 56 80 0 694 133 133 0 chr2 242146928 242147041 -11109542 - FLAM_C SINE Alu -14 129 2 992 124 0 104 chr2 242147042 242147164 -11109419 + Tigger5 DNA MER2_type 2143 2276 -47 2189 115 0 3 chr2 242147164 242147468 -11109115 - AluSx SINE Alu -9 303 1 992 124 0 104 chr2 242147468 242147482 -11109101 + Tigger5 DNA MER2_type 2276 2290 -33 1461 186 76 13 chr2 242147482 242147783 -11108800 - 7SLRNA srpRNA srpRNA 0 320 1 992 124 0 104 chr2 242147783 242147847 -11108736 + Tigger5 DNA MER2_type 2290 2323 0 738 111 0 9 chr2 242147865 242148002 -11108581 - AluJb SINE Alu 0 310 175 686 128 0 80 chr2 242148188 242148313 -11108270 - FRAM SINE Alu -11 165 51 282 294 76 8 chr2 242148316 242148435 -11108148 + LTR48 LTR ERV1 522 648 -139 1907 141 3 13 chr2 242148472 242148776 -11107807 - AluSx SINE Alu -11 301 1 2423 48 0 0 chr2 242149240 242149533 -11107050 - AluY SINE Alu -18 293 1 2215 91 0 3 chr2 242149672 242149968 -11106615 + AluSg SINE Alu 1 295 -15 245 211 105 0 chr2 242150414 242150490 -11106093 - Charlie4 DNA MER1_type 0 1961 1878 2087 98 0 77 chr2 242150493 242150695 -11105888 - AluSp SINE Alu -2 311 144 2232 100 0 0 chr2 242150695 242151004 -11105579 - AluY SINE Alu -2 309 1 2087 98 0 77 chr2 242151004 242151137 -11105446 - AluSp SINE Alu -169 144 2 1862 140 0 11 chr2 242151138 242151423 -11105160 - AluSx SINE Alu -15 297 16 2210 115 0 3 chr2 242151440 242151754 -11104829 - AluSp SINE Alu 0 313 1 719 209 17 138 chr2 242151758 242151817 -11104766 - Charlie4 DNA MER1_type -186 1775 1710 1739 155 10 20 chr2 242151817 242152114 -11104469 - AluJo SINE Alu -17 295 2 719 209 17 138 chr2 242152114 242152196 -11104387 - Charlie4 DNA MER1_type -251 1710 1620 2241 96 0 0 chr2 242152196 242152499 -11104084 + AluSc SINE Alu 1 303 -6 2287 89 0 22 chr2 242152499 242152634 -11103949 + AluY SINE Alu 1 137 -174 2174 86 0 4 chr2 242152634 242152969 -11103614 + AluSg SINE Alu 1 334 0 2287 89 0 22 chr2 242152969 242153148 -11103435 + AluY SINE Alu 137 309 -2 719 209 17 138 chr2 242153148 242153168 -11103415 - Charlie4 DNA MER1_type -340 1621 1600 2129 83 6 80 chr2 242153168 242153506 -11103077 - AluSq SINE Alu 0 313 1 719 209 17 138 chr2 242153506 242153667 -11102916 - Charlie4 DNA MER1_type -361 1600 35 2208 77 3 17 chr2 242153790 242154090 -11102493 + AluSq SINE Alu 1 296 -17 2172 115 0 0 chr2 242154626 242154922 -11101661 - AluSx SINE Alu -12 300 5 2151 106 7 0 chr2 242154963 242155265 -11101318 + AluSg SINE Alu 1 304 -6 399 252 13 133 chr2 242155390 242155493 -11101090 + L1MC4 LINE L1 7634 7748 -294 2185 100 10 3 chr2 242155493 242155792 -11100791 + AluSx SINE Alu 1 301 -11 399 252 13 133 chr2 242155792 242155852 -11100731 + L1MC4 LINE L1 7748 7763 -279 1986 104 0 73 chr2 242155852 242156169 -11100414 - AluSq SINE Alu -19 294 1 399 252 13 133 chr2 242156169 242156238 -11100345 + L1MC4 LINE L1 7763 7839 -203 2204 94 24 0 chr2 242156240 242156538 -11100045 + AluSg SINE Alu 1 305 -5 2212 86 3 3 chr2 242156551 242156853 -11099730 + AluSx SINE Alu 2 303 -9 667 220 71 55 chr2 242157850 242157927 -11098656 + MIR SINE MIR 16 90 -172 2184 92 7 3 chr2 242157927 242158233 -11098350 - AluSg SINE Alu -2 308 2 667 220 71 55 chr2 242158233 242158337 -11098246 + MIR SINE MIR 90 200 -62 2020 110 10 13 chr2 242158406 242158541 -11098042 + AluSx SINE Alu 1 135 -177 2377 81 3 0 chr2 242158541 242158849 -11097734 + AluSg SINE Alu 1 309 -1 2020 110 10 13 chr2 242158849 242159014 -11097569 + AluSx SINE Alu 135 300 -12 1353 171 94 31 chr2 242159071 242159357 -11097226 + AluJo SINE Alu 1 304 -8 2215 93 13 0 chr2 242159696 242159998 -11096585 + AluSx SINE Alu 1 306 -6 1336 113 140 0 chr2 242160072 242160293 -11096290 + AluJb SINE Alu 2 253 -59 2024 99 3 3 chr2 242160298 242160581 -11096002 + AluY SINE Alu 28 310 -1 209 211 228 0 chr2 242160581 242160638 -11095945 - MIR SINE MIR -159 103 34 1750 142 51 9 chr2 242160732 242161064 -11095519 + L1MB7 LINE L1 5777 6122 -62 2124 87 33 3 chr2 242161064 242161363 -11095220 - AluSx SINE Alu -4 308 1 1644 131 90 4 chr2 242161481 242161749 -11094834 - AluSx SINE Alu -9 303 13 2021 101 3 26 chr2 242161773 242162079 -11094504 - AluSx SINE Alu -13 299 1 1979 94 11 7 chr2 242162937 242163224 -11093359 + AluSc SINE Alu 1 288 -21 813 134 22 101 chr2 242165420 242165599 -11090984 - AluSg/x SINE Alu -11 299 135 1988 153 0 3 chr2 242165796 242166103 -11090480 - AluSx SINE Alu -6 306 1 357 177 0 0 chr2 242166166 242166228 -11090355 - AluSx SINE Alu -9 293 232 1034 123 31 6 chr2 242166228 242166391 -11090192 - AluSx SINE Alu -145 167 1 189 340 132 0 chr2 242166434 242166540 -11090043 - L2 LINE L2 -1 3271 3152 1838 160 17 0 chr2 242168704 242168998 -11087585 + AluJo SINE Alu 14 312 0 1144 147 0 25 chr2 242169268 242169465 -11087118 - AluSx SINE Alu 0 312 121 1093 84 0 52 chr2 242169481 242169500 -11087083 - AluSx SINE Alu -167 146 128 2325 87 3 10 chr2 242169500 242169812 -11086771 - AluSp SINE Alu -2 311 2 1093 84 0 52 chr2 242169812 242169946 -11086637 - AluSx SINE Alu -185 128 1 450 363 66 55 chr2 242170604 242170739 -11085844 - L3 LINE CR1 0 1577 1445 1738 168 7 26 chr2 242170739 242171048 -11085535 - AluJb SINE Alu -8 304 2 450 363 66 55 chr2 242171048 242171551 -11085032 - L3 LINE CR1 -132 1445 932 2453 70 0 0 chr2 242172116 242172416 -11084167 - AluSq SINE Alu -13 300 1 208 219 0 0 chr2 242172626 242172667 -11083916 + (GGGTG)n Simple_repeat Simple_repeat 4 44 0 1032 104 0 7 chr2 242173876 242174020 -11082563 - AluSq/x SINE Alu -169 143 1 2033 104 7 32 chr2 242175301 242175609 -11080974 - AluSq SINE Alu -13 300 1 732 296 52 8 chr2 242176878 242177099 -11079484 - MIR SINE MIR 0 262 27 2371 69 0 7 chr2 242177099 242177405 -11079178 - AluY SINE Alu -7 304 1 732 296 52 8 chr2 242177405 242177433 -11079150 - MIR SINE MIR -235 27 2 244 136 15 15 chr2 242178003 242178069 -11078514 + (CA)n Simple_repeat Simple_repeat 1 66 0 2128 117 0 13 chr2 242178256 242178594 -11077989 - AluSx SINE Alu 0 334 1 234 0 0 0 chr2 242178618 242178644 -11077939 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2321 67 3 14 chr2 242178651 242178948 -11077635 - AluY SINE Alu -17 294 1 1330 153 12 116 chr2 242178952 242179279 -11077304 - AluJo SINE Alu -19 293 1 225 200 40 0 chr2 242179390 242179440 -11077143 - L2 LINE L2 0 3272 3221 2236 89 3 0 chr2 242179635 242179950 -11076633 - AluSp SINE Alu 0 316 1 2199 88 14 0 chr2 242179959 242180253 -11076330 - AluSg SINE Alu -12 298 1 245 305 0 63 chr2 242180361 242180456 -11076127 + MIR SINE MIR 135 223 -39 266 200 0 0 chr2 242180460 242180505 -11076078 - MIR SINE MIR -105 157 113 2238 89 0 3 chr2 242181025 242181329 -11075254 - AluY SINE Alu -8 303 1 1102 60 0 0 chr2 242181329 242181463 -11075120 - AluY SINE Alu -177 134 1 293 346 63 8 chr2 242181465 242181592 -11074991 - MIR SINE MIR -50 212 79 24 85 0 0 chr2 242182554 242182613 -11073970 + GC_rich Low_complexity Low_complexity 1 59 0 202 228 16 173 chr2 242183397 242183497 -11073086 + MIR SINE MIR 112 190 -72 2200 93 3 0 chr2 242183497 242183798 -11072785 + AluSc SINE Alu 1 302 -7 202 228 16 173 chr2 242183798 242183824 -11072759 + MIR SINE MIR 190 218 -44 303 333 58 14 chr2 242184630 242184768 -11071815 + MIR SINE MIR 8 151 -111 1009 170 0 6 chr2 242185569 242185734 -11070849 + FRAM SINE Alu 8 171 -5 255 173 0 0 chr2 242186506 242186558 -11070025 + G-rich Low_complexity Low_complexity 6 57 0 220 346 7 15 chr2 242188557 242188693 -11067890 + (CATA)n Simple_repeat Simple_repeat 3 137 0 * 341 275 0 53 chr2 242188605 242188794 -11067789 + (CA)n Simple_repeat Simple_repeat 2 180 0 499 283 29 8 chr2 242189546 242189729 -11066854 + MIR SINE MIR 54 239 -23 220 350 50 0 chr2 242191122 242191202 -11065381 + MIR SINE MIR 10 93 -169 2263 111 0 0 chr2 242191539 242191845 -11064738 + AluSx SINE Alu 1 306 -6 2216 98 0 35 chr2 242192161 242192479 -11064104 - AluSg SINE Alu -3 307 1 1913 129 18 3 chr2 242192479 242192765 -11063818 - AluSp SINE Alu -23 290 1 221 191 18 21 chr2 242192819 242192881 -11063702 - MIR SINE MIR -74 134 90 1274 175 11 79 chr2 242193028 242193153 -11063430 - AluJo SINE Alu -51 261 129 2085 137 0 3 chr2 242193153 242193453 -11063130 - AluSg SINE Alu -11 299 1 2032 103 7 4 chr2 242193460 242193768 -11062815 - AluSx SINE Alu 0 309 1 2218 94 7 3 chr2 242193776 242194074 -11062509 - AluSx SINE Alu -13 299 1 1274 175 11 79 chr2 242194074 242194210 -11062373 - AluJo SINE Alu -196 116 1 216 0 0 0 chr2 242194215 242194239 -11062344 + (T)n Simple_repeat Simple_repeat 1 24 0 215 304 165 0 chr2 242196045 242196124 -11060459 + MIR SINE MIR 117 208 -54 2184 105 20 0 chr2 242196219 242196514 -11060069 + AluSx SINE Alu 2 302 -10 1917 119 3 48 chr2 242196782 242197093 -11059490 - AluSq SINE Alu -16 297 1 1814 146 7 23 chr2 242197096 242197405 -11059178 - AluJb SINE Alu -2 310 7 802 147 0 23 chr2 242197981 242198110 -11058473 + FLAM_C SINE Alu 1 126 -17 342 184 55 14 chr2 242198265 242198349 -11058234 + MIR SINE MIR 23 109 -99 1589 109 84 4 chr2 242198717 242198955 -11057628 - AluSg1 SINE Alu -50 259 3 523 76 0 0 chr2 242198978 242199044 -11057539 - AluS SINE Alu -247 66 1 2341 89 3 6 chr2 242199232 242199545 -11057038 - AluSq SINE Alu -1 312 1 1631 158 13 55 chr2 242199599 242199775 -11056808 - AluJo SINE Alu -14 298 139 2203 87 7 0 chr2 242199775 242200063 -11056520 + AluSx SINE Alu 1 290 -22 1631 158 13 55 chr2 242200063 242200197 -11056386 - AluJo SINE Alu -173 139 1 2200 87 0 3 chr2 242200207 242200538 -11056045 - AluSx SINE Alu 0 330 1 2281 89 0 0 chr2 242200826 242201117 -11055466 - AluSx SINE Alu -19 293 3 1909 144 6 10 chr2 242201847 242202159 -11054424 + AluJb SINE Alu 1 311 -1 505 208 66 9 chr2 242202199 242202305 -11054278 - MER81 DNA DNA 0 114 3 495 173 0 0 chr2 242202472 242202553 -11054030 + AluJ/FRAM SINE Alu 216 296 -16 2053 110 3 23 chr2 242202554 242202855 -11053728 + AluSp SINE Alu 1 295 -18 542 281 5 45 chr2 242203994 242204084 -11052499 - MIR SINE MIR -31 231 139 2190 120 0 0 chr2 242204084 242204393 -11052190 - AluSg SINE Alu -1 309 1 542 281 5 45 chr2 242204393 242204404 -11052179 - MIR SINE MIR -123 139 129 2318 89 3 6 chr2 242204404 242204718 -11051865 - AluSq SINE Alu 0 313 1 2141 103 10 13 chr2 242204720 242205031 -11051552 - AluSg SINE Alu 0 310 1 1772 183 0 0 chr2 242205033 242205328 -11051255 - AluJb SINE Alu -17 295 1 542 281 5 45 chr2 242205328 242205418 -11051165 - MIR SINE MIR -135 127 41 243 254 15 0 chr2 242205511 242205578 -11051005 - Charlie8 DNA MER1_type -994 1423 1356 793 178 0 0 chr2 242205649 242205778 -11050805 + FLAM_A SINE Alu 1 129 -4 2174 91 7 14 chr2 242206018 242206315 -11050268 + AluSq SINE Alu 1 295 -18 1843 107 20 99 chr2 242206315 242206659 -11049924 + AluYb8 SINE Alu 1 318 0 2290 63 3 53 chr2 242207198 242207516 -11049067 - AluSg SINE Alu -8 302 1 216 100 0 25 chr2 242210112 242210152 -11046431 + (CCG)n Simple_repeat Simple_repeat 3 41 0 22 70 0 0 chr2 242210292 242210335 -11046248 + GC_rich Low_complexity Low_complexity 1 43 0 22 80 0 0 chr2 242210689 242210739 -11045844 + GC_rich Low_complexity Low_complexity 1 50 0 189 107 0 0 chr2 242213027 242213055 -11043528 + (TATATG)n Simple_repeat Simple_repeat 3 30 0 480 100 0 0 chr2 242213055 242213125 -11043458 + U4 snRNA snRNA 2 71 -74 216 200 0 0 chr2 242213457 242213507 -11043076 + GA-rich Low_complexity Low_complexity 3 52 0 280 211 18 0 chr2 242216590 242216647 -11039936 + MIR SINE MIR 94 151 -111 231 322 11 6 chr2 242217424 242217601 -11038982 + (CACTC)n Simple_repeat Simple_repeat 1 178 0 1091 91 0 0 chr2 242218702 242218856 -11037727 - AluSg/x SINE Alu -18 292 139 678 298 122 45 chr2 242218897 242219316 -11037267 + MLT1K LTR MaLR 136 586 -2 1465 179 14 28 chr2 242219855 242220168 -11036415 + AluJb SINE Alu 1 309 0 356 237 26 44 chr2 242220613 242220727 -11035856 + L1ME LINE L1 5548 5659 -462 2293 76 13 0 chr2 242220727 242221028 -11035555 + AluSx SINE Alu 1 305 -7 823 167 14 0 chr2 242221069 242221263 -11035320 - AluJb SINE Alu 0 332 137 228 314 0 12 chr2 242221267 242221353 -11035230 + L1ME LINE L1 5705 5789 -332 875 229 39 24 chr2 242221837 242222042 -11034541 - MLT1K LTR MaLR -7 581 374 183 288 41 0 chr2 242223447 242223520 -11033063 + MIR SINE MIR 58 133 -75 1594 156 24 136 chr2 242223831 242223899 -11032684 - MLT1A1 LTR MaLR 0 365 291 2148 92 7 0 chr2 242223899 242224209 -11032374 + AluSq SINE Alu 1 312 0 1594 156 24 136 chr2 242224209 242224550 -11032033 - MLT1A1 LTR MaLR -74 291 1 776 143 8 15 chr2 242224647 242224780 -11031803 + AluJo SINE Alu 5 136 -176 2141 98 0 10 chr2 242225070 242225367 -11031216 - AluSg SINE Alu -16 294 1 21 0 0 0 chr2 242225801 242225822 -11030761 + AT_rich Low_complexity Low_complexity 1 21 0 1866 135 10 0 chr2 242226079 242226368 -11030215 - AluJb SINE Alu -20 292 1 1517 167 10 35 chr2 242226398 242226686 -11029897 - AluJo SINE Alu -18 294 14 1959 219 75 11 chr2 242226735 242226913 -11029670 - MER119 DNA MER1_type 0 583 418 1895 103 41 10 chr2 242226913 242227203 -11029380 - AluSx SINE Alu -13 299 1 1959 219 75 11 chr2 242227203 242227544 -11029039 - MER119 DNA MER1_type -165 418 31 794 119 8 8 chr2 242228452 242228570 -11028013 - FLAM_C SINE Alu -15 118 1 433 306 82 60 chr2 242228589 242228710 -11027873 + L2 LINE L2 3074 3191 -122 2121 101 7 0 chr2 242228710 242229006 -11027577 + AluSq SINE Alu 1 298 -15 433 306 82 60 chr2 242229006 242229116 -11027467 + L2 LINE L2 3191 3310 -3 213 281 87 61 chr2 242229344 242229575 -11027008 - L2 LINE L2 -1439 1875 1639 2222 94 0 3 chr2 242229645 242229944 -11026639 - AluSg SINE Alu -12 298 1 2018 128 7 0 chr2 242229944 242230248 -11026335 - AluSq SINE Alu -6 307 1 432 195 76 42 chr2 242230804 242230922 -11025661 + MER5A DNA MER1_type 1 122 -67 2332 88 0 0 chr2 242231484 242231779 -11024804 + AluSg SINE Alu 1 295 -15 860 165 19 6 chr2 242231786 242231970 -11024613 + FRAM SINE Alu 1 178 0 893 101 176 0 chr2 242231990 242232138 -11024445 - AluY SINE Alu -3 308 135 1631 150 0 34 chr2 242232143 242232457 -11024126 - AluJb SINE Alu 0 328 25 2068 90 3 31 chr2 242232506 242232820 -11023763 + AluSx SINE Alu 1 306 0 2008 90 52 7 chr2 242233102 242233391 -11023192 + AluSq SINE Alu 2 303 -10 21 71 0 0 chr2 242233983 242234025 -11022558 + AT_rich Low_complexity Low_complexity 1 42 0 379 320 64 19 chr2 242234989 242235145 -11021438 + MLT1K LTR MaLR 15 177 -411 237 241 0 17 chr2 242235260 242235318 -11021265 + LTR67 LTR ERVL 501 557 0 2401 61 0 6 chr2 242235469 242235782 -11020801 + AluY SINE Alu 1 311 0 308 148 0 0 chr2 242235851 242235905 -11020678 + Tigger5 DNA MER2_type 2232 2285 -38 2384 67 0 19 chr2 242236097 242236410 -11020173 + AluY SINE Alu 1 307 -4 2411 61 0 0 chr2 242236501 242236798 -11019785 + AluY SINE Alu 1 297 -14 2060 114 3 0 chr2 242236841 242237138 -11019445 - AluY SINE Alu -13 298 1 654 188 0 0 chr2 242237149 242237250 -11019333 - FLAM_A SINE Alu -41 101 1 2167 95 3 20 chr2 242237283 242237587 -11018996 + AluSx SINE Alu 1 299 -13 789 191 0 0 chr2 242237602 242237733 -11018850 + FLAM_A SINE Alu 3 133 0 1007 189 0 0 chr2 242237864 242238028 -11018555 - AluSg/x SINE Alu -20 292 129 396 288 96 28 chr2 242238344 242238521 -11018062 - MIR SINE MIR -55 207 19 2224 102 0 13 chr2 242240176 242240490 -11016093 + AluSx SINE Alu 1 310 -2 865 239 30 57 chr2 242241023 242241179 -11015404 + HAL1 LINE L1 668 827 -1680 1770 130 0 0 chr2 242241179 242241432 -11015151 - AluSx SINE Alu -17 295 43 865 239 30 57 chr2 242241432 242241610 -11014973 + HAL1 LINE L1 827 993 -1514 22 0 0 0 chr2 242241628 242241650 -11014933 + AT_rich Low_complexity Low_complexity 1 22 0 949 202 146 72 chr2 242241804 242241943 -11014640 + HAL1 LINE L1 1031 1158 -1349 1848 152 7 0 chr2 242241943 242242239 -11014344 + AluJb SINE Alu 1 298 -14 949 202 146 72 chr2 242242239 242242394 -11014189 + HAL1 LINE L1 1158 1300 -1207 1974 68 100 0 chr2 242242394 242242674 -11013909 + AluSp SINE Alu 1 308 -5 949 202 146 72 chr2 242242674 242242879 -11013704 + HAL1 LINE L1 1300 1568 -939 1984 269 69 35 chr2 242242909 242243659 -11012924 + HAL1 LINE L1 1681 2461 -46 2193 90 7 3 chr2 242243659 242243958 -11012625 - AluSp SINE Alu -13 300 1 1984 269 69 35 chr2 242243958 242244006 -11012577 + HAL1 LINE L1 2461 2506 -1 2231 81 3 23 chr2 242244679 242244989 -11011594 + AluSc SINE Alu 1 304 -5 2285 72 7 3 chr2 242245965 242246269 -11010314 - AluSp SINE Alu -8 305 1 25 31 0 0 chr2 242246296 242246328 -11010255 + AT_rich Low_complexity Low_complexity 1 32 0 219 36 0 0 chr2 242246746 242246774 -11009809 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 1000 92 224 51 chr2 242247546 242247661 -11008922 - MER30 DNA MER1_type 0 230 136 2021 120 0 16 chr2 242247661 242247978 -11008605 - AluSx SINE Alu 0 312 1 1000 92 224 51 chr2 242247978 242248058 -11008525 - MER30 DNA MER1_type -94 136 1 214 324 14 27 chr2 242248208 242248356 -11008227 + GA-rich Low_complexity Low_complexity 1 146 0 2378 61 0 3 chr2 242248631 242248927 -11007656 - AluSq SINE Alu -18 295 1 234 239 113 0 chr2 242248973 242249044 -11007539 + MIR SINE MIR 184 262 0 394 237 205 19 chr2 242249081 242249237 -11007346 + L2 LINE L2 2621 2805 -509 1281 84 6 28 chr2 242249424 242249603 -11006980 + THE1A LTR MaLR 181 355 0 11342 86 24 15 chr2 242249603 242251039 -11005544 + THE1A-int LTR MaLR 1 1454 -126 1965 106 9 64 chr2 242251039 242251369 -11005214 - AluSx SINE Alu 0 312 1 11342 86 24 15 chr2 242251369 242251498 -11005085 + THE1A-int LTR MaLR 1454 1580 0 2468 79 44 3 chr2 242251498 242251839 -11004744 + THE1A LTR MaLR 1 355 0 1577 106 33 122 chr2 242252018 242252347 -11004236 - AluSx SINE Alu -12 300 1 2682 143 249 19 chr2 242252668 242252699 -11003884 - L1MC3 LINE L1 0 7785 7762 1497 171 56 17 chr2 242252699 242252986 -11003597 - AluJb SINE Alu -14 298 1 2682 143 249 19 chr2 242252986 242253585 -11002998 - L1MC3 LINE L1 -23 7762 7010 311 303 75 36 chr2 242253773 242253963 -11002620 + MIR SINE MIR 12 215 -47 23 0 0 0 chr2 242254305 242254328 -11002255 + AT_rich Low_complexity Low_complexity 1 23 0 2483 40 7 0 chr2 242254371 242254671 -11001912 - AluY SINE Alu -9 302 1 2045 77 0 83 chr2 242254782 242255170 -11001413 + AluY SINE Alu 1 360 0 21 57 0 0 chr2 242255207 242255242 -11001341 + AT_rich Low_complexity Low_complexity 1 35 0 352 339 62 40 chr2 242255256 242255480 -11001103 + L2 LINE L2 2658 2886 -428 2201 90 0 47 chr2 242255891 242256213 -11000370 - AluSx SINE Alu -5 307 1 1721 203 28 8 chr2 242256452 242256806 -10999777 + MLT1A1 LTR MaLR 5 365 0 921 93 8 8 chr2 242257007 242257136 -10999447 + AluSq/x SINE Alu 21 149 -163 2243 88 3 0 chr2 242257182 242257476 -10999107 + AluSp SINE Alu 1 295 -18 1351 224 0 7 chr2 242257983 242258282 -10998301 - AluJo SINE Alu -15 297 1 1612 147 0 8 chr2 242258505 242258763 -10997820 - AluJb SINE Alu -18 294 39 2054 96 24 0 chr2 242258842 242259133 -10997450 - AluSq SINE Alu -15 298 1 333 220 21 142 chr2 242259236 242259377 -10997206 + L1ME4a LINE L1 5828 5951 -170 551 47 0 0 chr2 242259428 242259492 -10997091 + U6 snRNA snRNA 1 64 -43 214 205 0 0 chr2 242259656 242259695 -10996888 + (TCTA)n Simple_repeat Simple_repeat 1 39 0 216 97 0 0 chr2 242259706 242259737 -10996846 + (TAGA)n Simple_repeat Simple_repeat 1 31 0 1253 162 54 25 chr2 242259737 242259978 -10996605 - AluJo SINE Alu -64 248 1 940 165 41 12 chr2 242260041 242260211 -10996372 + MER5B DNA MER1_type 1 175 -3 698 206 133 0 chr2 242260273 242260428 -10996155 - MER5A DNA MER1_type -6 183 5 1792 155 7 0 chr2 242260577 242260873 -10995710 + AluJo SINE Alu 1 298 -14 364 307 82 78 chr2 242261862 242262119 -10994464 - MIR SINE MIR -1 261 4 2275 67 0 10 chr2 242262718 242263018 -10993565 - AluY SINE Alu -14 297 1 239 350 50 0 chr2 242263348 242263448 -10993135 - MIR SINE MIR -138 124 20 2224 102 0 0 chr2 242263882 242264185 -10992398 - AluSx SINE Alu -9 303 1 903 107 0 14 chr2 242264362 242264502 -10992081 + FLAM_C SINE Alu 6 143 0 379 259 259 6 chr2 242265004 242265166 -10991417 + MER5C DNA MER1_type 3 205 -119 1663 147 18 28 chr2 242265169 242265454 -10991129 - AluJo SINE Alu -5 307 26 189 107 0 0 chr2 242466827 242466855 -10789728 + (TATATG)n Simple_repeat Simple_repeat 3 30 0 510 100 0 0 chr2 242466855 242466925 -10789658 + U4 snRNA snRNA 2 71 -74 231 133 22 22 chr2 242466936 242466981 -10789602 - MER57A LTR ERV1 -68 335 291 216 200 0 0 chr2 242467257 242467307 -10789276 + GA-rich Low_complexity Low_complexity 3 52 0 2026 92 6 71 chr2 242468300 242468508 -10788075 + THE1A-int LTR MaLR 1265 1444 -136 1984 106 9 64 chr2 242468508 242468838 -10787745 - AluSx SINE Alu 0 312 1 2026 92 6 71 chr2 242468838 242468967 -10787616 + THE1A-int LTR MaLR 1444 1580 0 2492 79 44 3 chr2 242468967 242469308 -10787275 + THE1A LTR MaLR 1 355 0 1627 107 34 110 chr2 242469486 242469812 -10786771 - AluSx SINE Alu -11 301 1 587 141 66 19 chr2 242470132 242470163 -10786420 - L1MC3 LINE L1 0 7785 7757 1525 171 56 17 chr2 242470163 242470450 -10786133 - AluJb SINE Alu -14 298 1 587 141 66 19 chr2 242470450 242471049 -10785534 - L1MC3 LINE L1 -28 7757 7010 244 136 15 15 chr2 242471319 242471385 -10785198 + (TG)n Simple_repeat Simple_repeat 1 66 0 710 263 50 33 chr2 242471965 242471983 -10784600 + MIR SINE MIR 19 35 -227 2348 69 0 7 chr2 242471983 242472289 -10784294 + AluY SINE Alu 1 304 -7 710 263 50 33 chr2 242472289 242472510 -10784073 + MIR SINE MIR 35 262 0 2002 104 7 32 chr2 242473778 242474086 -10782497 + AluSq SINE Alu 1 300 -13 1021 104 0 7 chr2 242475363 242475507 -10781076 + AluSq/x SINE Alu 1 143 -169 2132 64 0 0 chr2 242475852 242476116 -10780467 - AluY SINE Alu -47 264 1 807 114 0 0 chr2 242476294 242476408 -10780175 + FLAM_C SINE Alu 6 119 -24 195 42 0 0 chr2 242476410 242476434 -10780149 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 196 302 0 0 chr2 242476935 242476978 -10779605 + MER5C DNA MER1_type 3 45 -279 1749 157 17 27 chr2 242477113 242477413 -10779170 - AluJo SINE Alu -15 297 1 353 246 100 9 chr2 242477415 242477525 -10779058 + MER5C DNA MER1_type 205 324 0 423 165 12 6 chr2 242477612 242477864 -10778719 + AluJo SINE Alu 2 297 -15 1663 171 6 44 chr2 242478453 242478769 -10777814 + AluJo SINE Alu 1 304 -8 2031 117 13 16 chr2 242480185 242480493 -10776090 + AluSx SINE Alu 1 307 -5 189 284 17 95 chr2 242480737 242480797 -10775786 - MIR SINE MIR -56 206 158 2114 96 17 0 chr2 242480797 242481088 -10775495 - AluY SINE Alu -15 296 1 189 284 17 95 chr2 242481088 242481143 -10775440 - MIR SINE MIR -104 158 100 186 43 0 0 chr2 242481362 242481385 -10775198 + (TTA)n Simple_repeat Simple_repeat 1 23 0 901 224 3 61 chr2 242481388 242481682 -10774901 - AluSx SINE Alu -35 277 1 410 265 238 11 chr2 242481728 242481917 -10774666 - MIR SINE MIR -26 236 5 2020 120 3 10 chr2 242482038 242482339 -10774244 - AluSx SINE Alu -12 300 2 2029 132 0 22 chr2 242482344 242482663 -10773920 - AluSx SINE Alu 0 312 1 332 288 74 8 chr2 242482711 242482777 -10773806 - L1MC/D LINE L1 -747 5399 5339 1576 157 3 55 chr2 242482777 242483070 -10773513 - AluJb SINE Alu -32 280 3 332 288 74 8 chr2 242483070 242483244 -10773339 - L1MC/D LINE L1 -807 5339 5236 2162 83 59 0 chr2 242483506 242483795 -10772788 + AluSq SINE Alu 2 307 -6 296 308 65 0 chr2 242484080 242484187 -10772396 + L2 LINE L2 3199 3312 -1 238 118 0 78 chr2 242484393 242484444 -10772139 - MIR SINE MIR -213 49 3 898 123 0 8 chr2 242484789 242484919 -10771664 - FLAM_C SINE Alu -4 129 1 631 259 130 30 chr2 242485049 242485435 -10771148 + L1ME LINE L1 4735 5205 -941 2193 113 0 0 chr2 242485435 242485736 -10770847 + AluSg SINE Alu 1 301 -9 631 259 130 30 chr2 242485736 242485956 -10770627 + L1ME LINE L1 5205 5402 -744 960 213 57 17 chr2 242485991 242486221 -10770362 - MIR SINE MIR -21 241 3 257 250 204 0 chr2 242486244 242486376 -10770207 + L1ME LINE L1 5409 5567 -554 183 42 0 0 chr2 242487980 242488004 -10768579 + (CGGTG)n Simple_repeat Simple_repeat 1 24 0 21 0 0 0 chr2 242488425 242488446 -10768137 + GC_rich Low_complexity Low_complexity 1 21 0 570 282 81 0 chr2 242489474 242489648 -10766935 - MIR3 SINE MIR 0 208 21 199 167 48 0 chr2 242489997 242490039 -10766544 - L2 LINE L2 -8 3305 3262 2467 215 105 31 chr2 242490306 242491173 -10765410 - L1ME3 LINE L1 -64 6098 5164 900 194 0 35 chr2 242491173 242491343 -10765240 - FAM SINE Alu -11 164 1 2467 215 105 31 chr2 242491343 242491436 -10765147 - L1ME3 LINE L1 -998 5164 5079 1638 169 17 17 chr2 242491639 242491941 -10764642 + AluJo SINE Alu 3 304 -8 251 353 95 49 chr2 242492023 242492247 -10764336 + L2 LINE L2 2352 2603 -711 2105 113 7 0 chr2 242492247 242492547 -10764036 - AluSx SINE Alu -9 303 2 251 353 95 49 chr2 242492547 242492710 -10763873 + L2 LINE L2 2603 2757 -557 272 211 18 0 chr2 242495788 242495845 -10760738 + MIR SINE MIR 94 151 -111 242 322 11 6 chr2 242496627 242496804 -10759779 + (CACTC)n Simple_repeat Simple_repeat 1 178 0 1107 91 0 0 chr2 242497904 242498058 -10758525 - AluSg/x SINE Alu -18 294 141 719 297 127 46 chr2 242498099 242498516 -10758067 + MLT1K LTR MaLR 136 586 -2 1489 179 14 28 chr2 242499053 242499366 -10757217 + AluJb SINE Alu 1 309 0 349 237 26 44 chr2 242499811 242499925 -10756658 + L1ME LINE L1 5548 5659 -462 2268 83 13 0 chr2 242499925 242500227 -10756356 + AluSx SINE Alu 1 306 -6 2185 88 3 0 chr2 242500425 242500710 -10755873 - AluSx SINE Alu -26 286 1 2256 89 0 0 chr2 242500998 242501289 -10755294 - AluSx SINE Alu -19 293 3 1878 144 6 10 chr2 242502019 242502331 -10754252 + AluJb SINE Alu 1 311 -1 498 208 66 9 chr2 242502371 242502477 -10754106 - MER81 DNA DNA 0 114 3 496 173 0 0 chr2 242502644 242502725 -10753858 + AluJ/FRAM SINE Alu 216 296 -16 2030 109 3 23 chr2 242502726 242503028 -10753555 + AluSp SINE Alu 1 296 -17 540 281 5 45 chr2 242504166 242504256 -10752327 - MIR SINE MIR -31 231 139 2169 120 0 0 chr2 242504256 242504565 -10752018 - AluSg SINE Alu -1 309 1 540 281 5 45 chr2 242504565 242504576 -10752007 - MIR SINE MIR -123 139 129 2296 89 3 6 chr2 242504576 242504890 -10751693 - AluSq SINE Alu 0 313 1 2118 103 10 13 chr2 242504892 242505203 -10751380 - AluSg SINE Alu 0 310 1 1729 183 0 0 chr2 242505205 242505500 -10751083 - AluJb SINE Alu -17 295 1 540 281 5 45 chr2 242505500 242505590 -10750993 - MIR SINE MIR -135 127 41 266 254 15 0 chr2 242505683 242505750 -10750833 - Charlie8 DNA MER1_type -994 1423 1356 789 178 0 0 chr2 242505821 242505950 -10750633 + FLAM_A SINE Alu 1 129 -4 181 293 83 38 chr2 242506025 242506158 -10750425 + L3 LINE CR1 1216 1354 -223 2148 91 7 14 chr2 242506190 242506487 -10750096 + AluSq SINE Alu 1 295 -18 1714 122 20 99 chr2 242506487 242506831 -10749752 + AluYb8 SINE Alu 1 318 0 233 288 14 0 chr2 242507098 242507171 -10749412 + MER116 DNA Mariner 3 76 -4 2182 63 9 54 chr2 242507359 242507675 -10748908 - AluSg SINE Alu -8 302 1 210 37 0 0 chr2 242509806 242509833 -10746750 + (TA)n Simple_repeat Simple_repeat 1 27 0 2065 118 0 14 chr2 242509833 242510130 -10746453 - AluSx SINE Alu -19 293 1 234 0 0 0 chr2 242510154 242510180 -10746403 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2299 67 3 14 chr2 242510187 242510484 -10746099 - AluY SINE Alu -17 294 1 1288 153 12 116 chr2 242510488 242510815 -10745768 - AluJo SINE Alu -19 293 1 224 200 40 0 chr2 242510926 242510976 -10745607 - L2 LINE L2 0 3272 3221 2208 89 3 0 chr2 242511171 242511486 -10745097 - AluSp SINE Alu 0 316 1 2179 88 14 0 chr2 242511495 242511789 -10744794 - AluSg SINE Alu -12 298 1 233 305 0 63 chr2 242511897 242511992 -10744591 + MIR SINE MIR 135 223 -39 265 200 0 0 chr2 242511996 242512041 -10744542 - MIR SINE MIR -105 157 113 2171 89 3 3 chr2 242512562 242512865 -10743718 - AluY SINE Alu -8 303 1 1095 60 0 0 chr2 242512865 242512999 -10743584 - AluY SINE Alu -177 134 1 270 346 63 8 chr2 242513001 242513128 -10743455 - MIR SINE MIR -50 212 79 21 0 0 0 chr2 242514091 242514112 -10742471 + GC_rich Low_complexity Low_complexity 1 21 0 187 228 16 173 chr2 242514914 242515014 -10741569 + MIR SINE MIR 112 190 -72 2175 93 3 0 chr2 242515014 242515315 -10741268 + AluSc SINE Alu 1 302 -7 187 228 16 173 chr2 242515315 242515341 -10741242 + MIR SINE MIR 190 218 -44 277 330 0 0 chr2 242516163 242516260 -10740323 + MIR SINE MIR 26 122 -140 1038 170 0 6 chr2 242517082 242517247 -10739336 + FRAM SINE Alu 8 171 -5 255 173 0 0 chr2 242518015 242518067 -10738516 + G-rich Low_complexity Low_complexity 6 57 0 220 346 7 15 chr2 242520062 242520198 -10736385 + (CATA)n Simple_repeat Simple_repeat 3 137 0 * 341 275 0 53 chr2 242520110 242520299 -10736284 + (CA)n Simple_repeat Simple_repeat 2 180 0 461 314 35 6 chr2 242521065 242521234 -10735349 + MIR SINE MIR 66 239 -23 227 325 62 12 chr2 242522619 242522699 -10733884 + MIR SINE MIR 10 93 -169 2355 108 0 3 chr2 242523036 242523343 -10733240 + AluSx SINE Alu 1 306 -6 2196 98 6 38 chr2 242523658 242523975 -10732608 - AluSg SINE Alu -3 307 1 1995 129 18 3 chr2 242523975 242524261 -10732322 - AluSp SINE Alu -23 290 1 228 173 22 22 chr2 242524315 242524377 -10732206 - MIR SINE MIR -78 130 90 1310 175 11 79 chr2 242524523 242524648 -10731935 - AluJo SINE Alu -51 261 129 2177 137 0 3 chr2 242524648 242524948 -10731635 - AluSg SINE Alu -11 299 1 2119 103 7 4 chr2 242524955 242525263 -10731320 - AluSx SINE Alu 0 309 1 2310 94 7 3 chr2 242525271 242525569 -10731014 - AluSx SINE Alu -13 299 1 1310 175 11 79 chr2 242525569 242525705 -10730878 - AluJo SINE Alu -196 116 1 207 0 0 0 chr2 242525710 242525733 -10730850 + (T)n Simple_repeat Simple_repeat 1 23 0 203 304 165 0 chr2 242527534 242527613 -10728970 + MIR SINE MIR 117 208 -54 2309 102 20 0 chr2 242527708 242528003 -10728580 + AluSx SINE Alu 2 302 -10 2005 122 3 48 chr2 242528271 242528582 -10728001 - AluSq SINE Alu -16 297 1 1902 146 7 23 chr2 242528585 242528894 -10727689 - AluJb SINE Alu -2 310 7 831 139 47 8 chr2 242529469 242529598 -10726985 + AluJo SINE Alu 1 134 -178 358 184 55 14 chr2 242529753 242529837 -10726746 + MIR SINE MIR 23 109 -99 1614 110 89 4 chr2 242530205 242530442 -10726141 - AluSg1 SINE Alu -50 259 3 531 77 0 0 chr2 242530465 242530530 -10726053 - AluS SINE Alu -246 66 2 2271 100 13 7 chr2 242530719 242531029 -10725554 - AluSq SINE Alu -1 312 1 293 226 57 19 chr2 242531083 242531189 -10725394 - AluJb SINE Alu -3 299 190 203 194 0 0 chr2 242531312 242531348 -10725235 + T-rich Low_complexity Low_complexity 1 36 0 831 167 14 0 chr2 242531530 242531707 -10724876 - AluJb SINE Alu 0 315 137 306 314 0 12 chr2 242531711 242531797 -10724786 + L1ME LINE L1 5705 5789 -332 824 229 39 24 chr2 242532281 242532486 -10724097 - MLT1K LTR MaLR -7 581 374 189 288 41 0 chr2 242533890 242533963 -10722620 + MIR SINE MIR 58 133 -75 1618 158 24 136 chr2 242534274 242534342 -10722241 - MLT1A1 LTR MaLR 0 365 291 2172 96 14 0 chr2 242534342 242534650 -10721933 + AluSq SINE Alu 1 312 0 1618 158 24 136 chr2 242534650 242534991 -10721592 - MLT1A1 LTR MaLR -74 291 1 799 154 7 15 chr2 242535085 242535221 -10721362 + AluJo SINE Alu 2 136 -176 2266 98 0 10 chr2 242535511 242535806 -10720777 - AluSg SINE Alu -18 292 1 21 0 0 0 chr2 242536240 242536261 -10720322 + AT_rich Low_complexity Low_complexity 1 21 0 2015 132 10 0 chr2 242536518 242536807 -10719776 - AluJb SINE Alu -20 292 1 1676 163 10 35 chr2 242536837 242537125 -10719458 - AluJo SINE Alu -18 294 14 1777 222 79 12 chr2 242537174 242537350 -10719233 - MER119 DNA MER1_type 0 583 420 2053 105 41 10 chr2 242537350 242537644 -10718939 - AluSx SINE Alu -9 303 1 1777 222 79 12 chr2 242537644 242537985 -10718598 - MER119 DNA MER1_type -163 420 31 812 119 8 8 chr2 242538893 242539011 -10717572 - FLAM_C SINE Alu -15 118 1 438 302 82 60 chr2 242539030 242539151 -10717432 + L2 LINE L2 3074 3191 -122 2265 101 7 0 chr2 242539151 242539447 -10717136 + AluSq SINE Alu 1 298 -15 438 302 82 60 chr2 242539447 242539557 -10717026 + L2 LINE L2 3191 3310 -3 223 281 87 61 chr2 242539785 242540016 -10716567 - L2 LINE L2 -1439 1875 1639 2386 93 0 3 chr2 242540086 242540387 -10716196 - AluSg SINE Alu -10 300 1 2140 128 7 0 chr2 242540387 242540691 -10715892 - AluSq SINE Alu -6 307 1 442 195 76 42 chr2 242541247 242541365 -10715218 + MER5A DNA MER1_type 1 122 -67 2481 88 0 0 chr2 242541927 242542222 -10714361 + AluSg SINE Alu 1 295 -15 938 165 19 6 chr2 242542229 242542413 -10714170 + FRAM SINE Alu 1 178 0 951 121 157 6 chr2 242542433 242542599 -10713984 - AluY SINE Alu -2 309 119 1794 158 0 14 chr2 242542608 242542899 -10713684 - AluJb SINE Alu -1 311 25 2221 89 3 43 chr2 242542948 242543274 -10713309 + AluSx SINE Alu 1 312 0 2149 90 52 7 chr2 242543544 242543833 -10712750 + AluSq SINE Alu 2 303 -10 21 71 0 0 chr2 242544425 242544467 -10712116 + AT_rich Low_complexity Low_complexity 1 42 0 333 310 71 19 chr2 242545431 242545586 -10710997 + MLT1K LTR MaLR 15 177 -411 2551 61 0 6 chr2 242545909 242546222 -10710361 + AluY SINE Alu 1 311 0 229 260 0 0 chr2 242546236 242546286 -10710297 + Tigger5 DNA MER2_type 6 55 -2268 294 148 0 0 chr2 242546291 242546345 -10710238 + Tigger5 DNA MER2_type 2232 2285 -38 2500 70 0 19 chr2 242546538 242546850 -10709733 + AluY SINE Alu 1 306 -5 1953 83 12 94 chr2 242546941 242547329 -10709254 + AluY SINE Alu 1 360 0 21 57 0 0 chr2 242547366 242547401 -10709182 + AT_rich Low_complexity Low_complexity 1 35 0 348 339 62 40 chr2 242547415 242547639 -10708944 + L2 LINE L2 2658 2886 -428 2345 90 0 47 chr2 242548050 242548371 -10708212 - AluSx SINE Alu -6 306 1 1648 199 29 9 chr2 242548610 242548952 -10707631 + MLT1A1 LTR MaLR 5 353 -12 986 93 8 8 chr2 242549163 242549292 -10707291 + AluSq/x SINE Alu 21 149 -163 2376 92 3 0 chr2 242549338 242549632 -10706951 + AluSp SINE Alu 1 295 -18 1489 220 0 10 chr2 242550139 242550439 -10706144 - AluJo SINE Alu -15 297 1 1738 147 0 8 chr2 242550663 242550921 -10705662 - AluJb SINE Alu -18 294 39 2077 101 35 0 chr2 242551000 242551288 -10705295 - AluSq SINE Alu -15 298 1 339 220 21 142 chr2 242551391 242551532 -10705051 + L1ME4a LINE L1 5828 5951 -170 523 47 0 0 chr2 242551583 242551647 -10704936 + U6 snRNA snRNA 1 64 -43 214 205 0 0 chr2 242551811 242551850 -10704733 + (TCTA)n Simple_repeat Simple_repeat 1 39 0 216 97 0 0 chr2 242551861 242551892 -10704691 + (TAGA)n Simple_repeat Simple_repeat 1 31 0 1371 162 54 25 chr2 242551892 242552133 -10704450 - AluJo SINE Alu -64 248 1 955 165 41 12 chr2 242552196 242552366 -10704217 + MER5B DNA MER1_type 1 175 -3 696 206 133 0 chr2 242552428 242552583 -10704000 - MER5A DNA MER1_type -6 183 5 1930 154 6 25 chr2 242552732 242553050 -10703533 + AluJo SINE Alu 1 312 0 353 307 82 78 chr2 242554017 242554274 -10702309 - MIR SINE MIR -1 261 4 2474 63 0 7 chr2 242554873 242555172 -10701411 - AluY SINE Alu -14 297 1 242 350 50 0 chr2 242555502 242555602 -10700981 - MIR SINE MIR -138 124 20 2061 133 3 20 chr2 242556036 242556337 -10700246 - AluSx SINE Alu -7 305 10 2123 108 10 29 chr2 242556591 242556898 -10699685 - AluSx SINE Alu -11 301 1 2316 98 0 0 chr2 242557074 242557370 -10699213 - AluSq SINE Alu -17 296 1 214 318 0 15 chr2 242557447 242557513 -10699070 - MIR SINE MIR -123 85 21 342 229 0 0 chr2 242557730 242557826 -10698757 + (CA)n Simple_repeat Simple_repeat 1 96 0 954 145 0 0 chr2 242557827 242557958 -10698625 - FRAM SINE Alu -24 152 22 213 259 69 0 chr2 242558573 242558631 -10697952 - L3 LINE CR1 -177 1400 1339 1428 157 4 60 chr2 242558736 242558872 -10697711 + AluJb SINE Alu 1 118 -194 2339 115 0 0 chr2 242558872 242559168 -10697415 + AluSq SINE Alu 1 296 -17 1428 157 4 60 chr2 242559168 242559280 -10697303 + AluJb SINE Alu 118 235 -77 861 99 304 18 chr2 242559299 242559470 -10697113 - AluSg1 SINE Alu -89 220 1 272 261 162 9 chr2 242559604 242559715 -10696868 + MIR SINE MIR 89 216 -46 506 289 114 84 chr2 242560055 242560484 -10696099 - L3 LINE CR1 -5 1572 1131 1694 166 45 14 chr2 242561157 242561447 -10695136 + AluJb SINE Alu 1 299 -13 1203 125 6 0 chr2 242562133 242562301 -10694282 - AluSg/x SINE Alu -10 302 134 24 77 0 0 chr2 242562417 242562469 -10694114 + AT_rich Low_complexity Low_complexity 1 52 0 2187 115 3 0 chr2 242562478 242562773 -10693810 - AluY SINE Alu -15 296 1 674 188 0 0 chr2 242562784 242562885 -10693698 - FLAM_A SINE Alu -41 101 1 2257 94 10 26 chr2 242562917 242563226 -10693357 + AluSx SINE Alu 1 304 -8 811 191 0 0 chr2 242563233 242563364 -10693219 + FLAM_A SINE Alu 3 133 0 1094 189 0 0 chr2 242563495 242563659 -10692924 - AluSg/x SINE Alu -20 292 129 384 288 96 28 chr2 242563975 242564152 -10692431 - MIR SINE MIR -55 207 19 2364 105 0 13 chr2 242565807 242566122 -10690461 + AluSx SINE Alu 1 311 -1 795 251 27 54 chr2 242566655 242566811 -10689772 + HAL1 LINE L1 668 827 -1680 1892 131 0 0 chr2 242566811 242567063 -10689520 - AluSx SINE Alu -18 294 43 795 251 27 54 chr2 242567063 242567241 -10689342 + HAL1 LINE L1 827 993 -1514 22 0 0 0 chr2 242567259 242567281 -10689302 + AT_rich Low_complexity Low_complexity 1 22 0 584 248 39 43 chr2 242567435 242567574 -10689009 + HAL1 LINE L1 1031 1169 -1338 2060 148 7 0 chr2 242567574 242567877 -10688706 + AluJb SINE Alu 1 305 -7 584 248 39 43 chr2 242567877 242568019 -10688564 + HAL1 LINE L1 1169 1311 -1196 2111 68 100 0 chr2 242568032 242568312 -10688271 + AluSp SINE Alu 1 308 -5 433 176 53 86 chr2 242568327 242568514 -10688069 + HAL1 LINE L1 1388 1568 -939 1828 269 69 35 chr2 242568544 242569294 -10687289 + HAL1 LINE L1 1681 2461 -46 2340 90 7 3 chr2 242569294 242569593 -10686990 - AluSp SINE Alu -13 300 1 1828 269 69 35 chr2 242569593 242569641 -10686942 + HAL1 LINE L1 2461 2506 -1 2346 81 7 23 chr2 242570315 242570625 -10685958 + AluSc SINE Alu 1 305 -4 2390 73 10 3 chr2 242571601 242571904 -10684679 - AluSp SINE Alu -8 305 1 25 31 0 0 chr2 242571931 242571963 -10684620 + AT_rich Low_complexity Low_complexity 1 32 0 1007 92 224 51 chr2 242573181 242573296 -10683287 - MER30 DNA MER1_type 0 230 136 2200 117 0 16 chr2 242573296 242573613 -10682970 - AluSx SINE Alu 0 312 1 1007 92 224 51 chr2 242573613 242573693 -10682890 - MER30 DNA MER1_type -94 136 1 214 324 14 27 chr2 242573843 242573991 -10682592 + GA-rich Low_complexity Low_complexity 1 146 0 2520 61 0 3 chr2 242574265 242574561 -10682022 - AluSq SINE Alu -18 295 1 233 239 113 0 chr2 242574607 242574678 -10681905 + MIR SINE MIR 184 262 0 419 231 205 19 chr2 242574715 242574871 -10681712 + L2 LINE L2 2621 2805 -509 1209 84 6 28 chr2 242575058 242575237 -10681346 + THE1A LTR MaLR 181 355 0 8655 88 29 1 chr2 242575237 242576466 -10680117 + THE1A-int LTR MaLR 1 1264 -316 348 321 193 19 chr2 242577175 242577689 -10678894 + L2 LINE L2 1712 2314 -1000 1794 149 37 81 chr2 242577745 242577954 -10678629 - MLT1B LTR MaLR 0 390 206 1211 203 0 44 chr2 242577954 242578250 -10678333 - AluJb SINE Alu -19 283 1 1794 149 37 81 chr2 242578250 242578448 -10678135 - MLT1B LTR MaLR -184 206 1 13617 113 82 12 chr2 242578531 242579095 -10677488 - Tigger1 DNA MER2_type 0 2418 1894 2264 122 0 0 chr2 242579095 242579399 -10677184 - AluSq SINE Alu -9 304 1 13617 113 82 12 chr2 242579399 242579846 -10676737 - Tigger1 DNA MER2_type -524 1894 1479 1872 138 20 13 chr2 242579846 242580144 -10676439 + AluSx SINE Alu 1 300 -12 13617 113 82 12 chr2 242580144 242581389 -10675194 - Tigger1 DNA MER2_type -939 1479 5 1730 161 16 35 chr2 242581474 242581648 -10674935 - AluJo SINE Alu -8 304 137 2254 112 3 10 chr2 242581648 242581961 -10674622 - AluSp SINE Alu 0 313 3 1730 161 16 35 chr2 242581961 242582096 -10674487 - AluJo SINE Alu -175 137 1 1854 165 21 0 chr2 242582168 242582459 -10674124 + AluSx SINE Alu 1 297 -15 2116 116 0 0 chr2 242582545 242582841 -10673742 + AluSx SINE Alu 6 301 0 2235 133 0 0 chr2 242583159 242583461 -10673122 + AluSx SINE Alu 1 302 -10 351 376 82 15 chr2 242583800 242584143 -10672440 + L2 LINE L2 2871 3236 -36 491 270 63 0 chr2 242584348 242584474 -10672109 - MIR SINE MIR -5 257 124 951 169 26 0 chr2 242584698 242584852 -10671731 - AluSg/x SINE Alu -17 293 136 832 245 10 15 chr2 242584895 242585137 -10671446 + MLT1F1 LTR MaLR 1 234 -321 425 260 167 5 chr2 242585184 242585376 -10671207 + MLT1F1 LTR MaLR 371 593 -2 1966 128 25 0 chr2 242585763 242586069 -10670514 - AluSx SINE Alu 0 313 1 318 203 47 0 chr2 242586074 242586138 -10670445 + MER20 DNA MER1_type 1 67 -152 4897 142 74 55 chr2 242586146 242586966 -10669617 - L1MD2 LINE L1 -16 6343 5456 233 186 0 0 chr2 242586966 242587009 -10669574 + 5S rRNA rRNA 1 43 -78 4897 142 74 55 chr2 242587009 242587216 -10669367 - L1MD2 LINE L1 -903 5456 5254 789 166 11 40 chr2 242587225 242587400 -10669183 + MER20 DNA MER1_type 50 219 0 321 204 34 0 chr2 242587400 242587486 -10669097 + MER20 DNA MER1_type 128 216 -3 333 218 23 0 chr2 242587491 242587578 -10669005 + MER20 DNA MER1_type 131 219 0 319 230 23 0 chr2 242587580 242587667 -10668916 + MER20 DNA MER1_type 131 219 0 * 321 239 22 0 chr2 242587667 242587757 -10668826 + MER20 DNA MER1_type 128 219 0 318 220 33 0 chr2 242587757 242587846 -10668737 + MER20 DNA MER1_type 128 219 0 274 253 33 0 chr2 242587846 242587935 -10668648 + MER20 DNA MER1_type 128 219 0 339 228 22 0 chr2 242587935 242588025 -10668558 + MER20 DNA MER1_type 128 219 0 349 220 22 0 chr2 242588025 242588114 -10668469 + MER20 DNA MER1_type 128 218 -1 312 243 9 36 chr2 242588133 242588244 -10668339 + MER20 DNA MER1_type 112 219 0 299 235 25 0 chr2 242588252 242588333 -10668250 + MER20 DNA MER1_type 137 219 0 225 289 33 0 chr2 242588333 242588421 -10668162 + MER20 DNA MER1_type 128 218 -1 311 203 25 0 chr2 242588432 242588511 -10668072 + MER20 DNA MER1_type 139 219 0 * 318 231 22 0 chr2 242588511 242588600 -10667983 + MER20 DNA MER1_type 128 218 -1 316 234 9 36 chr2 242588619 242588730 -10667853 + MER20 DNA MER1_type 112 219 0 301 227 34 0 chr2 242588730 242588816 -10667767 + MER20 DNA MER1_type 128 216 -3 314 230 23 0 chr2 242588821 242588908 -10667675 + MER20 DNA MER1_type 131 219 0 306 241 23 0 chr2 242588910 242588997 -10667586 + MER20 DNA MER1_type 131 219 0 * 345 228 22 0 chr2 242588997 242589087 -10667496 + MER20 DNA MER1_type 128 219 0 320 239 22 0 chr2 242589087 242589177 -10667406 + MER20 DNA MER1_type 128 219 0 327 218 18 36 chr2 242589195 242589305 -10667278 + MER20 DNA MER1_type 112 219 0 290 242 33 0 chr2 242589305 242589394 -10667189 + MER20 DNA MER1_type 128 219 0 312 220 33 0 chr2 242589394 242589483 -10667100 + MER20 DNA MER1_type 128 219 0 309 242 33 0 chr2 242589483 242589572 -10667011 + MER20 DNA MER1_type 128 219 0 354 228 22 0 chr2 242589572 242589662 -10666921 + MER20 DNA MER1_type 128 219 0 263 238 25 0 chr2 242589709 242589789 -10666794 + MER20 DNA MER1_type 137 218 -1 306 230 23 0 chr2 242589792 242589879 -10666704 + MER20 DNA MER1_type 131 219 0 * 344 228 22 0 chr2 242589879 242589969 -10666614 + MER20 DNA MER1_type 128 219 0 337 209 33 0 chr2 242589969 242590058 -10666525 + MER20 DNA MER1_type 128 219 0 306 207 27 54 chr2 242590076 242590187 -10666396 + MER20 DNA MER1_type 112 219 0 * 315 231 33 0 chr2 242590187 242590276 -10666307 + MER20 DNA MER1_type 128 219 0 314 237 21 0 chr2 242590362 242590455 -10666128 + MER20 DNA MER1_type 125 219 0 275 242 33 0 chr2 242590455 242590544 -10666039 + MER20 DNA MER1_type 128 219 0 333 239 22 0 chr2 242590544 242590634 -10665949 + MER20 DNA MER1_type 128 219 0 291 242 33 0 chr2 242590634 242590723 -10665860 + MER20 DNA MER1_type 128 219 0 339 221 26 18 chr2 242590723 242590812 -10665771 + MER20 DNA MER1_type 130 219 0 354 217 22 0 chr2 242590812 242590902 -10665681 + MER20 DNA MER1_type 128 219 0 358 217 22 0 chr2 242590902 242590992 -10665591 + MER20 DNA MER1_type 128 219 0 332 228 22 0 chr2 242590992 242591082 -10665501 + MER20 DNA MER1_type 128 219 0 340 209 33 0 chr2 242591082 242591171 -10665412 + MER20 DNA MER1_type 128 219 0 359 198 33 0 chr2 242591171 242591260 -10665323 + MER20 DNA MER1_type 128 219 0 293 231 33 0 chr2 242591260 242591349 -10665234 + MER20 DNA MER1_type 128 219 0 331 220 33 0 chr2 242591349 242591438 -10665145 + MER20 DNA MER1_type 128 219 0 246 283 22 0 chr2 242591438 242591528 -10665055 + MER20 DNA MER1_type 128 219 0 325 239 22 0 chr2 242591528 242591618 -10664965 + MER20 DNA MER1_type 128 219 0 318 231 33 0 chr2 242591618 242591707 -10664876 + MER20 DNA MER1_type 128 219 0 340 209 33 0 chr2 242591707 242591796 -10664787 + MER20 DNA MER1_type 128 219 0 354 217 22 0 chr2 242591796 242591886 -10664697 + MER20 DNA MER1_type 128 219 0 325 220 33 0 chr2 242591886 242591975 -10664608 + MER20 DNA MER1_type 128 219 0 289 253 33 0 chr2 242591975 242592064 -10664519 + MER20 DNA MER1_type 128 219 0 343 228 22 0 chr2 242592064 242592154 -10664429 + MER20 DNA MER1_type 128 219 0 297 220 33 0 chr2 242592154 242592243 -10664340 + MER20 DNA MER1_type 128 219 0 290 233 33 0 chr2 242592243 242592331 -10664252 + MER20 DNA MER1_type 128 218 -1 292 241 23 0 chr2 242592334 242592421 -10664162 + MER20 DNA MER1_type 131 219 0 * 331 220 33 0 chr2 242592421 242592510 -10664073 + MER20 DNA MER1_type 128 219 0 310 216 34 0 chr2 242592510 242592596 -10663987 + MER20 DNA MER1_type 128 216 -3 360 207 23 0 chr2 242592601 242592688 -10663895 + MER20 DNA MER1_type 131 219 0 334 234 9 36 chr2 242592706 242592817 -10663766 + MER20 DNA MER1_type 112 219 0 318 231 33 0 chr2 242592817 242592906 -10663677 + MER20 DNA MER1_type 128 219 0 225 289 33 0 chr2 242592906 242592994 -10663589 + MER20 DNA MER1_type 128 218 -1 350 177 25 0 chr2 242593005 242593084 -10663499 + MER20 DNA MER1_type 139 219 0 309 231 33 0 chr2 242593084 242593173 -10663410 + MER20 DNA MER1_type 128 219 0 303 220 33 0 chr2 242593173 242593262 -10663321 + MER20 DNA MER1_type 128 219 0 299 242 33 0 chr2 242593262 242593351 -10663232 + MER20 DNA MER1_type 128 219 0 290 250 22 0 chr2 242593351 242593441 -10663142 + MER20 DNA MER1_type 128 219 0 299 220 33 0 chr2 242593441 242593530 -10663053 + MER20 DNA MER1_type 128 219 0 324 209 33 0 chr2 242593530 242593619 -10662964 + MER20 DNA MER1_type 128 219 0 309 231 33 0 chr2 242593619 242593708 -10662875 + MER20 DNA MER1_type 128 219 0 345 228 22 0 chr2 242593708 242593798 -10662785 + MER20 DNA MER1_type 128 219 0 344 228 22 0 chr2 242593798 242593888 -10662695 + MER20 DNA MER1_type 128 219 0 353 217 26 35 chr2 242593902 242594017 -10662566 + MER20 DNA MER1_type 106 219 0 285 231 33 0 chr2 242594017 242594106 -10662477 + MER20 DNA MER1_type 128 219 0 278 244 44 0 chr2 242594106 242594194 -10662389 + MER20 DNA MER1_type 128 219 0 302 215 25 0 chr2 242594203 242594282 -10662301 + MER20 DNA MER1_type 139 219 0 * 349 220 22 0 chr2 242594282 242594371 -10662212 + MER20 DNA MER1_type 128 218 -1 315 234 9 36 chr2 242594390 242594501 -10662082 + MER20 DNA MER1_type 112 219 0 282 242 33 0 chr2 242594501 242594590 -10661993 + MER20 DNA MER1_type 128 219 0 327 231 22 0 chr2 242594590 242594679 -10661904 + MER20 DNA MER1_type 128 218 -1 299 243 9 36 chr2 242594698 242594809 -10661774 + MER20 DNA MER1_type 112 219 0 * 301 239 22 0 chr2 242594809 242594899 -10661684 + MER20 DNA MER1_type 128 219 0 292 239 34 0 chr2 242594899 242594985 -10661598 + MER20 DNA MER1_type 128 216 -3 343 207 23 0 chr2 242594990 242595077 -10661506 + MER20 DNA MER1_type 131 219 0 309 231 33 0 chr2 242595077 242595166 -10661417 + MER20 DNA MER1_type 128 219 0 293 231 33 0 chr2 242595166 242595255 -10661328 + MER20 DNA MER1_type 128 219 0 345 228 22 0 chr2 242595255 242595345 -10661238 + MER20 DNA MER1_type 128 219 0 344 228 22 0 chr2 242595345 242595435 -10661148 + MER20 DNA MER1_type 128 219 0 353 217 26 35 chr2 242595449 242595564 -10661019 + MER20 DNA MER1_type 106 219 0 285 231 33 0 chr2 242595564 242595653 -10660930 + MER20 DNA MER1_type 128 219 0 315 231 33 0 chr2 242595653 242595742 -10660841 + MER20 DNA MER1_type 128 219 0 338 228 22 0 chr2 242595742 242595832 -10660751 + MER20 DNA MER1_type 128 219 0 299 231 33 0 chr2 242595832 242595921 -10660662 + MER20 DNA MER1_type 128 219 0 309 242 33 0 chr2 242595921 242596010 -10660573 + MER20 DNA MER1_type 128 219 0 333 220 33 0 chr2 242596010 242596099 -10660484 + MER20 DNA MER1_type 128 219 0 354 228 22 0 chr2 242596099 242596189 -10660394 + MER20 DNA MER1_type 128 219 0 288 224 47 0 chr2 242596319 242596404 -10660179 + MER20 DNA MER1_type 131 219 0 243 207 35 0 chr2 242596567 242596625 -10659958 + MER20 DNA MER1_type 160 219 0 * 259 264 33 0 chr2 242596625 242596714 -10659869 + MER20 DNA MER1_type 128 219 0 354 216 9 36 chr2 242596732 242596843 -10659740 + MER20 DNA MER1_type 112 219 0 355 227 9 36 chr2 242596950 242597060 -10659523 + MER20 DNA MER1_type 112 218 -1 363 216 9 36 chr2 242597079 242597190 -10659393 + MER20 DNA MER1_type 112 219 0 264 220 44 11 chr2 242597190 242597279 -10659304 + MER20 DNA MER1_type 128 219 0 279 242 33 0 chr2 242597279 242597368 -10659215 + MER20 DNA MER1_type 128 219 0 350 225 9 36 chr2 242597386 242597497 -10659086 + MER20 DNA MER1_type 112 219 0 * 385 206 22 0 chr2 242597497 242597587 -10658996 + MER20 DNA MER1_type 128 219 0 287 250 22 0 chr2 242597713 242597805 -10658778 + MER20 DNA MER1_type 126 219 0 * 300 217 22 22 chr2 242597805 242597894 -10658689 + MER20 DNA MER1_type 131 219 0 358 218 9 36 chr2 242598000 242598110 -10658473 + MER20 DNA MER1_type 112 218 -1 315 234 9 36 chr2 242598129 242598240 -10658343 + MER20 DNA MER1_type 112 219 0 299 227 34 0 chr2 242598240 242598326 -10658257 + MER20 DNA MER1_type 128 216 -3 305 230 23 0 chr2 242598331 242598418 -10658165 + MER20 DNA MER1_type 131 219 0 * 340 209 33 0 chr2 242598418 242598507 -10658076 + MER20 DNA MER1_type 128 219 0 318 231 33 0 chr2 242598507 242598596 -10657987 + MER20 DNA MER1_type 128 219 0 314 234 9 36 chr2 242598614 242598725 -10657858 + MER20 DNA MER1_type 112 219 0 298 218 18 45 chr2 242598832 242598942 -10657641 + MER20 DNA MER1_type 112 218 -1 318 234 9 36 chr2 242598961 242599072 -10657511 + MER20 DNA MER1_type 112 219 0 294 242 33 0 chr2 242599072 242599161 -10657422 + MER20 DNA MER1_type 128 219 0 310 239 22 0 chr2 242599161 242599251 -10657332 + MER20 DNA MER1_type 128 219 0 359 198 33 0 chr2 242599251 242599340 -10657243 + MER20 DNA MER1_type 128 219 0 293 231 33 0 chr2 242599340 242599429 -10657154 + MER20 DNA MER1_type 128 219 0 293 231 33 0 chr2 242599429 242599518 -10657065 + MER20 DNA MER1_type 128 219 0 309 209 44 11 chr2 242599518 242599607 -10656976 + MER20 DNA MER1_type 128 219 0 251 250 33 11 chr2 242599607 242599697 -10656886 + MER20 DNA MER1_type 128 219 0 325 239 22 0 chr2 242599697 242599787 -10656796 + MER20 DNA MER1_type 128 219 0 318 231 33 0 chr2 242599787 242599876 -10656707 + MER20 DNA MER1_type 128 219 0 340 209 33 0 chr2 242599876 242599965 -10656618 + MER20 DNA MER1_type 128 219 0 348 217 22 0 chr2 242599965 242600055 -10656528 + MER20 DNA MER1_type 128 219 0 316 220 33 0 chr2 242600055 242600144 -10656439 + MER20 DNA MER1_type 128 219 0 320 220 33 0 chr2 242600144 242600233 -10656350 + MER20 DNA MER1_type 128 219 0 354 246 18 18 chr2 242600233 242600323 -10656260 + MER20 DNA MER1_type 130 219 0 290 233 44 0 chr2 242600323 242600411 -10656172 + MER20 DNA MER1_type 128 219 0 396 196 22 0 chr2 242600411 242600501 -10656082 + MER20 DNA MER1_type 128 219 0 283 253 33 0 chr2 242600501 242600590 -10655993 + MER20 DNA MER1_type 128 219 0 354 216 9 36 chr2 242600608 242600719 -10655864 + MER20 DNA MER1_type 112 219 0 297 231 33 0 chr2 242600719 242600808 -10655775 + MER20 DNA MER1_type 128 219 0 340 209 33 0 chr2 242600808 242600897 -10655686 + MER20 DNA MER1_type 128 219 0 342 209 33 0 chr2 242600897 242600986 -10655597 + MER20 DNA MER1_type 128 219 0 326 250 22 0 chr2 242600986 242601076 -10655507 + MER20 DNA MER1_type 128 219 0 289 226 19 38 chr2 242601094 242601200 -10655383 + MER20 DNA MER1_type 112 215 -4 318 203 25 0 chr2 242601214 242601293 -10655290 + MER20 DNA MER1_type 139 219 0 304 242 33 0 chr2 242601293 242601382 -10655201 + MER20 DNA MER1_type 128 219 0 339 228 22 0 chr2 242601382 242601472 -10655111 + MER20 DNA MER1_type 128 219 0 301 231 33 0 chr2 242601472 242601561 -10655022 + MER20 DNA MER1_type 128 219 0 308 222 33 0 chr2 242601561 242601649 -10654934 + MER20 DNA MER1_type 128 218 -1 265 253 23 0 chr2 242601652 242601739 -10654844 + MER20 DNA MER1_type 131 219 0 * 299 242 33 0 chr2 242601739 242601828 -10654755 + MER20 DNA MER1_type 128 219 0 325 228 20 20 chr2 242601855 242601956 -10654627 + MER20 DNA MER1_type 119 219 0 303 250 22 0 chr2 242601956 242602046 -10654537 + MER20 DNA MER1_type 128 219 0 341 227 11 0 chr2 242602087 242602175 -10654408 + MER20 DNA MER1_type 131 219 0 285 242 33 0 chr2 242602175 242602264 -10654319 + MER20 DNA MER1_type 128 219 0 316 220 33 0 chr2 242602351 242602442 -10654141 + MER20 DNA MER1_type 126 219 0 303 231 33 0 chr2 242602442 242602531 -10654052 + MER20 DNA MER1_type 128 219 0 337 209 33 0 chr2 242602531 242602620 -10653963 + MER20 DNA MER1_type 128 219 0 288 227 34 0 chr2 242602620 242602706 -10653877 + MER20 DNA MER1_type 128 216 -3 315 225 12 0 chr2 242602720 242602800 -10653783 + MER20 DNA MER1_type 139 219 0 319 242 22 0 chr2 242602837 242602928 -10653655 + MER20 DNA MER1_type 126 218 -1 357 217 22 0 chr2 242602966 242603058 -10653525 + MER20 DNA MER1_type 126 219 0 326 243 9 36 chr2 242603076 242603187 -10653396 + MER20 DNA MER1_type 112 219 0 306 252 9 36 chr2 242603205 242603316 -10653267 + MER20 DNA MER1_type 112 219 0 296 232 9 45 chr2 242603334 242603446 -10653137 + MER20 DNA MER1_type 112 219 0 357 235 10 20 chr2 242603473 242603575 -10653008 + MER20 DNA MER1_type 119 219 0 371 216 9 36 chr2 242603593 242603704 -10652879 + MER20 DNA MER1_type 112 219 0 1320 220 47 103 chr2 242603839 242604326 -10652257 + MER21B LTR ERV1 12 471 -392 1031 133 0 42 chr2 242604327 242604492 -10652091 + FRAM SINE Alu 3 160 -16 1143 195 58 58 chr2 242604493 242604841 -10651742 + MER21B LTR ERV1 468 815 -48 601 298 55 0 chr2 242604880 242605061 -10651522 - MIR SINE MIR -2 260 70 2010 178 60 5 chr2 242605102 242605502 -10651081 - LOR1b LTR ERV1 0 461 40 1420 153 62 14 chr2 242605511 242605780 -10650803 - MER1B DNA MER1_type 0 339 57 1237 56 11 11 chr2 242605780 242605959 -10650624 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 393 207 0 0 chr2 242605964 242606051 -10650532 + CT-rich Low_complexity Low_complexity 1 87 0 2437 93 0 3 chr2 242606051 242606363 -10650220 - AluSx SINE Alu -1 311 1 2341 107 3 0 chr2 242606618 242606917 -10649666 + AluSx SINE Alu 1 300 -12 234 91 0 0 chr2 242607061 242607094 -10649489 + (TG)n Simple_repeat Simple_repeat 1 33 0 1830 223 25 2 chr2 242607477 242607908 -10648675 - L1MD2 LINE L1 0 6359 5919 2138 138 0 7 chr2 242607917 242608222 -10648361 - AluJb SINE Alu -9 303 1 2149 102 17 10 chr2 242608229 242608522 -10648061 - AluSq SINE Alu -18 295 1 225 250 0 0 chr2 242608688 242608732 -10647851 - MIR SINE MIR 0 262 219 299 194 26 0 chr2 242608738 242608811 -10647772 - MIR SINE MIR -90 118 42 773 123 0 0 chr2 242610162 242610268 -10646315 - AluJo/FRAM SINE Alu -13 299 194 1543 184 15 4 chr2 242610269 242610535 -10646048 - AluJo SINE Alu -43 269 1 572 288 6 18 chr2 242610655 242610818 -10645765 + MIR SINE MIR 52 212 -50 276 57 0 0 chr2 242610825 242610860 -10645723 - MLT1B LTR MaLR 0 390 356 2671 186 48 14 chr2 242610860 242611206 -10645377 + MER6A DNA MER2_type 3 157 -708 2036 138 7 7 chr2 242611206 242611497 -10645086 + AluSx SINE Alu 1 291 -21 2671 186 48 14 chr2 242611497 242611753 -10644830 + MER6A DNA MER2_type 157 403 -202 1169 132 0 23 chr2 242611753 242611927 -10644656 - AluSq SINE Alu -15 298 129 345 228 22 0 chr2 242612094 242612184 -10644399 - MER20 DNA MER1_type 0 219 128 315 231 33 0 chr2 242612184 242612273 -10644310 - MER20 DNA MER1_type 0 219 128 332 209 33 0 chr2 242612273 242612362 -10644221 - MER20 DNA MER1_type 0 219 128 276 231 33 0 chr2 242612362 242612451 -10644132 - MER20 DNA MER1_type 0 219 128 305 250 22 0 chr2 242612451 242612541 -10644042 - MER20 DNA MER1_type 0 219 128 321 231 33 0 chr2 242612541 242612630 -10643953 - MER20 DNA MER1_type 0 219 128 293 231 33 0 chr2 242612630 242612719 -10643864 - MER20 DNA MER1_type 0 219 128 309 231 33 0 chr2 242612719 242612808 -10643775 - MER20 DNA MER1_type 0 219 128 343 207 23 0 chr2 242612808 242612895 -10643688 - MER20 DNA MER1_type 0 219 131 292 239 34 0 chr2 242612900 242612986 -10643597 - MER20 DNA MER1_type -3 216 128 301 239 22 0 chr2 242612986 242613076 -10643507 - MER20 DNA MER1_type 0 219 128 299 243 9 36 chr2 242613076 242613187 -10643396 - MER20 DNA MER1_type 0 219 112 327 231 22 0 chr2 242613206 242613295 -10643288 - MER20 DNA MER1_type -1 218 128 257 253 33 0 chr2 242613295 242613384 -10643199 - MER20 DNA MER1_type 0 219 128 348 230 10 20 chr2 242613384 242613474 -10643109 - MER20 DNA MER1_type 0 219 131 309 231 33 0 chr2 242613474 242613563 -10643020 - MER20 DNA MER1_type 0 219 128 315 231 33 0 chr2 242613563 242613652 -10642931 - MER20 DNA MER1_type 0 219 128 329 211 35 35 chr2 242613652 242613766 -10642817 - MER20 DNA MER1_type 0 219 106 320 239 22 0 chr2 242613780 242613870 -10642713 - MER20 DNA MER1_type 0 219 128 345 228 22 0 chr2 242613870 242613960 -10642623 - MER20 DNA MER1_type 0 219 128 319 230 23 0 chr2 242613960 242614047 -10642536 - MER20 DNA MER1_type 0 219 131 314 230 23 0 chr2 242614049 242614136 -10642447 - MER20 DNA MER1_type 0 219 131 301 227 34 0 chr2 242614141 242614227 -10642356 - MER20 DNA MER1_type -3 216 128 316 234 9 36 chr2 242614227 242614338 -10642245 - MER20 DNA MER1_type 0 219 112 287 253 22 0 chr2 242614357 242614446 -10642137 - MER20 DNA MER1_type -1 218 128 311 203 25 0 chr2 242614446 242614525 -10642058 - MER20 DNA MER1_type 0 219 139 225 289 33 0 chr2 242614536 242614624 -10641959 - MER20 DNA MER1_type -1 218 128 308 222 25 0 chr2 242614624 242614705 -10641878 - MER20 DNA MER1_type 0 219 137 312 243 9 36 chr2 242614713 242614824 -10641759 - MER20 DNA MER1_type 0 219 112 349 220 22 0 chr2 242614843 242614932 -10641651 - MER20 DNA MER1_type -1 218 128 339 228 22 0 chr2 242614932 242615022 -10641561 - MER20 DNA MER1_type 0 219 128 274 253 33 0 chr2 242615022 242615111 -10641472 - MER20 DNA MER1_type 0 219 128 325 220 33 0 chr2 242615111 242615200 -10641383 - MER20 DNA MER1_type 0 219 128 333 220 33 0 chr2 242615200 242615289 -10641294 - MER20 DNA MER1_type 0 219 128 309 242 33 0 chr2 242615289 242615378 -10641205 - MER20 DNA MER1_type 0 219 128 299 231 33 0 chr2 242615378 242615467 -10641116 - MER20 DNA MER1_type 0 219 128 338 228 22 0 chr2 242615467 242615557 -10641026 - MER20 DNA MER1_type 0 219 128 315 231 33 0 chr2 242615557 242615646 -10640937 - MER20 DNA MER1_type 0 219 128 285 231 33 0 chr2 242615646 242615735 -10640848 - MER20 DNA MER1_type 0 219 128 353 217 26 35 chr2 242615735 242615850 -10640733 - MER20 DNA MER1_type 0 219 106 344 228 22 0 chr2 242615864 242615954 -10640629 - MER20 DNA MER1_type 0 219 128 348 228 22 0 chr2 242615954 242616044 -10640539 - MER20 DNA MER1_type 0 219 128 345 228 22 0 chr2 242616044 242616134 -10640449 - MER20 DNA MER1_type 0 219 128 315 231 33 0 chr2 242616134 242616223 -10640360 - MER20 DNA MER1_type 0 219 128 332 209 33 0 chr2 242616223 242616312 -10640271 - MER20 DNA MER1_type 0 219 128 276 231 33 0 chr2 242616312 242616401 -10640182 - MER20 DNA MER1_type 0 219 128 283 253 25 0 chr2 242616401 242616480 -10640103 - MER20 DNA MER1_type 0 219 139 345 226 26 35 chr2 242616576 242616691 -10639892 - MER20 DNA MER1_type 0 219 106 344 228 22 0 chr2 242616705 242616795 -10639788 - MER20 DNA MER1_type 0 219 128 345 228 22 0 chr2 242616795 242616885 -10639698 - MER20 DNA MER1_type 0 219 128 309 231 33 0 chr2 242616885 242616974 -10639609 - MER20 DNA MER1_type 0 219 128 324 209 33 0 chr2 242616974 242617063 -10639520 - MER20 DNA MER1_type 0 219 128 299 220 33 0 chr2 242617063 242617152 -10639431 - MER20 DNA MER1_type 0 219 128 290 250 22 0 chr2 242617152 242617242 -10639341 - MER20 DNA MER1_type 0 219 128 276 253 33 0 chr2 242617242 242617331 -10639252 - MER20 DNA MER1_type 0 219 128 293 231 33 0 chr2 242617331 242617420 -10639163 - MER20 DNA MER1_type 0 219 128 309 231 33 0 chr2 242617420 242617509 -10639074 - MER20 DNA MER1_type 0 219 128 350 177 25 0 chr2 242617509 242617588 -10638995 - MER20 DNA MER1_type 0 219 139 225 289 33 0 chr2 242617599 242617687 -10638896 - MER20 DNA MER1_type -1 218 128 318 231 33 0 chr2 242617687 242617776 -10638807 - MER20 DNA MER1_type 0 219 128 334 234 9 36 chr2 242617776 242617887 -10638696 - MER20 DNA MER1_type 0 219 112 347 218 23 0 chr2 242617905 242617992 -10638591 - MER20 DNA MER1_type 0 219 131 310 216 34 0 chr2 242617997 242618083 -10638500 - MER20 DNA MER1_type -3 216 128 356 220 33 0 chr2 242618083 242618172 -10638411 - MER20 DNA MER1_type 0 219 128 314 241 23 0 chr2 242618172 242618259 -10638324 - MER20 DNA MER1_type 0 219 131 323 222 33 0 chr2 242618262 242618350 -10638233 - MER20 DNA MER1_type -1 218 128 316 230 23 0 chr2 242618350 242618437 -10638146 - MER20 DNA MER1_type 0 219 131 318 243 9 36 chr2 242618439 242618550 -10638033 - MER20 DNA MER1_type 0 219 112 305 233 33 0 chr2 242618569 242618657 -10637926 - MER20 DNA MER1_type -1 218 128 336 203 25 0 chr2 242618657 242618736 -10637847 - MER20 DNA MER1_type 0 219 139 244 289 33 0 chr2 242618747 242618835 -10637748 - MER20 DNA MER1_type -1 218 128 320 220 44 11 chr2 242618835 242618924 -10637659 - MER20 DNA MER1_type 0 219 128 360 234 9 36 chr2 242618924 242619035 -10637548 - MER20 DNA MER1_type 0 219 112 372 220 22 0 chr2 242619054 242619143 -10637440 - MER20 DNA MER1_type -1 218 128 349 220 33 0 chr2 242619143 242619232 -10637351 - MER20 DNA MER1_type 0 219 128 373 220 33 0 chr2 242619232 242619321 -10637262 - MER20 DNA MER1_type 0 219 128 372 225 9 36 chr2 242619321 242619432 -10637151 - MER20 DNA MER1_type 0 219 112 361 228 22 0 chr2 242619450 242619540 -10637043 - MER20 DNA MER1_type 0 219 128 339 239 22 0 chr2 242619540 242619630 -10636953 - MER20 DNA MER1_type 0 219 128 366 209 33 0 chr2 242619630 242619719 -10636864 - MER20 DNA MER1_type 0 219 128 337 239 22 0 chr2 242619719 242619809 -10636774 - MER20 DNA MER1_type 0 219 128 327 230 23 0 chr2 242619809 242619896 -10636687 - MER20 DNA MER1_type 0 219 131 233 263 25 0 chr2 242619899 242619979 -10636604 - MER20 DNA MER1_type -1 218 137 378 228 22 0 chr2 242620026 242620116 -10636467 - MER20 DNA MER1_type 0 219 128 358 220 33 0 chr2 242620116 242620205 -10636378 - MER20 DNA MER1_type 0 219 128 319 221 18 71 chr2 242620205 242620294 -10636289 - MER20 DNA MER1_type 0 219 137 313 231 33 0 chr2 242620294 242620383 -10636200 - MER20 DNA MER1_type 0 219 128 340 234 9 36 chr2 242620383 242620494 -10636089 - MER20 DNA MER1_type 0 219 112 341 231 33 0 chr2 242620512 242620601 -10635982 - MER20 DNA MER1_type 0 219 128 366 209 33 0 chr2 242620601 242620690 -10635893 - MER20 DNA MER1_type 0 219 128 366 209 33 0 chr2 242620690 242620779 -10635804 - MER20 DNA MER1_type 0 219 128 331 239 22 0 chr2 242620779 242620869 -10635714 - MER20 DNA MER1_type 0 219 128 384 217 22 0 chr2 242620869 242620959 -10635624 - MER20 DNA MER1_type 0 219 128 379 217 22 0 chr2 242620959 242621049 -10635534 - MER20 DNA MER1_type 0 219 128 370 198 33 0 chr2 242621049 242621138 -10635445 - MER20 DNA MER1_type 0 219 128 847 166 11 40 chr2 242621138 242621313 -10635270 - MER20 DNA MER1_type 0 219 50 5190 142 74 55 chr2 242621322 242621529 -10635054 + L1MD2 LINE L1 5254 5456 -903 249 186 0 0 chr2 242621529 242621572 -10635011 - 5S rRNA rRNA -78 43 1 5190 142 74 55 chr2 242621572 242622392 -10634191 + L1MD2 LINE L1 5456 6343 -16 341 203 47 0 chr2 242622400 242622464 -10634119 - MER20 DNA MER1_type -152 67 1 1837 108 27 0 chr2 242622469 242622727 -10633856 + AluSq SINE Alu 1 265 -48 255 31 0 0 chr2 242622743 242622775 -10633808 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 471 260 167 5 chr2 242623161 242623353 -10633230 - MLT1F1 LTR MaLR -2 593 371 881 255 10 13 chr2 242623400 242623642 -10632941 - MLT1F1 LTR MaLR -321 234 1 876 169 26 0 chr2 242623685 242623839 -10632744 + AluSg/x SINE Alu 136 293 -17 490 270 63 0 chr2 242624063 242624189 -10632394 + MIR SINE MIR 124 257 -5 330 376 82 15 chr2 242624394 242624737 -10631846 - L2 LINE L2 -36 3236 2871 2164 128 0 0 chr2 242625078 242625390 -10631193 - AluSx SINE Alu 0 312 1 1980 116 0 0 chr2 242625708 242626004 -10630579 - AluSx SINE Alu 0 301 6 1711 165 21 0 chr2 242626090 242626381 -10630202 - AluSx SINE Alu -15 297 1 1581 161 16 35 chr2 242626453 242626588 -10629995 + AluJo SINE Alu 1 137 -175 2097 112 3 10 chr2 242626588 242626901 -10629682 + AluSp SINE Alu 3 313 0 1581 161 16 35 chr2 242626901 242627075 -10629508 + AluJo SINE Alu 137 304 -8 14427 110 82 12 chr2 242627160 242628405 -10628178 + Tigger1 DNA MER2_type 5 1163 -1255 1724 138 20 13 chr2 242628405 242628703 -10627880 - AluSx SINE Alu -12 300 1 14427 110 82 12 chr2 242628703 242629150 -10627433 + Tigger1 DNA MER2_type 1163 1578 -840 2112 122 0 0 chr2 242629150 242629454 -10627129 + AluSq SINE Alu 1 304 -9 14427 110 82 12 chr2 242629454 242630018 -10626565 + Tigger1 DNA MER2_type 1578 2418 0 1838 142 37 81 chr2 242630101 242630300 -10626283 + MLT1B LTR MaLR 1 174 -216 1854 133 0 7 chr2 242630300 242630585 -10625998 + AluJb SINE Alu 1 283 -29 1838 142 37 81 chr2 242630585 242630793 -10625790 + MLT1B LTR MaLR 174 390 0 348 323 191 18 chr2 242630849 242631363 -10625220 - L2 LINE L2 -1000 2314 1712 677 279 62 26 chr2 242632016 242632356 -10624227 - MER20B DNA MER1_type -1 782 431 238 282 132 64 chr2 242634014 242634213 -10622370 + MIR SINE MIR 16 224 -38 816 186 0 0 chr2 242634464 242634593 -10621990 - FLAM_C SINE Alu -13 130 2 453 19 0 0 chr2 242635161 242635215 -10621368 + (CA)n Simple_repeat Simple_repeat 2 55 0 24 0 0 0 chr2 242635332 242635356 -10621227 + AT_rich Low_complexity Low_complexity 1 24 0 456 227 117 0 chr2 242636819 242636973 -10619610 + HAL1b LINE L1 484 655 -693 320 317 33 71 chr2 242637146 242637329 -10619254 - L1ME LINE L1 -385 5736 5561 1833 171 0 9 chr2 242637431 242637746 -10618837 - AluJb SINE Alu 0 312 1 1545 190 0 29 chr2 242638065 242638381 -10618202 + AluJo SINE Alu 1 307 -5 913 151 7 0 chr2 242638386 242638525 -10618058 + FRAM SINE Alu 1 140 -36 236 133 17 0 chr2 242638536 242638596 -10617987 + (TA)n Simple_repeat Simple_repeat 1 61 0 670 208 0 46 chr2 242638827 242638957 -10617626 - FLAM_A SINE Alu -9 124 1 2336 70 0 0 chr2 242639463 242639761 -10616822 + AluY SINE Alu 1 298 -13 265 320 71 24 chr2 242641230 242641483 -10615100 - L3 LINE CR1 -160 1417 1153 2147 95 3 10 chr2 242641935 242642239 -10614344 + AluSq SINE Alu 1 302 -11 1172 189 16 109 chr2 242642242 242642564 -10614019 + AluJo SINE Alu 1 292 -10 664 146 0 0 chr2 242643764 242643860 -10612723 - AluJ/FLAM SINE Alu -215 97 2 181 330 175 10 chr2 242644025 242644122 -10612461 - L2 LINE L2 -4 3268 3156 2256 96 0 0 chr2 242645453 242645756 -10610827 + AluSg SINE Alu 1 303 -7 2298 70 10 0 chr2 242645821 242646122 -10610461 + AluSp SINE Alu 1 304 -9 235 273 39 0 chr2 242646238 242646315 -10610268 - L1MC4 LINE L1 -31 8011 7932 1646 145 10 39 chr2 242648647 242648789 -10607794 + AluSx SINE Alu 3 148 -164 2124 97 10 3 chr2 242648789 242649088 -10607495 + AluSq SINE Alu 1 301 -12 1646 145 10 39 chr2 242649088 242649255 -10607328 + AluSx SINE Alu 148 303 -9 229 322 58 23 chr2 242650029 242650116 -10606467 - L2 LINE L2 0 3272 3183 281 303 13 0 chr2 242650270 242650346 -10606237 + G-rich Low_complexity Low_complexity 5 81 0 515 269 32 19 chr2 242650587 242650847 -10605736 + MER46C DNA MER2_type 4 338 0 466 252 47 16 chr2 242650847 242650974 -10605609 - MIR SINE MIR -108 154 24 21 0 0 0 chr2 242651324 242651345 -10605238 + AT_rich Low_complexity Low_complexity 1 21 0 2037 125 7 0 chr2 242651495 242651798 -10604785 - AluSx SINE Alu -7 305 1 279 333 88 0 chr2 242652314 242652428 -10604155 + L3 LINE CR1 1436 1559 -18 216 0 0 0 chr2 242652931 242652955 -10603628 + (TTG)n Simple_repeat Simple_repeat 2 25 0 2764 7 0 0 chr2 242652970 242653276 -10603307 + AluYb8 SINE Alu 1 306 -12 185 218 55 55 chr2 242653590 242653645 -10602938 - MIR3 SINE MIR -21 187 133 241 332 77 43 chr2 242653732 242653940 -10602643 - L3b LINE CR1 -228 1355 1141 * 342 362 114 0 chr2 242653928 242654077 -10602506 - L2 LINE L2 -15 3257 3092 23 0 0 0 chr2 242654601 242654624 -10601959 + AT_rich Low_complexity Low_complexity 1 23 0 2067 109 10 0 chr2 242655579 242655872 -10600711 + AluSx SINE Alu 7 302 -10 365 291 10 0 chr2 242656884 242656987 -10599596 + L2 LINE L2 3168 3271 -1 4301 114 63 80 chr2 242657923 242658086 -10598497 - L1PA16 LINE L1 -2 6164 6000 2378 44 7 3 chr2 242658086 242658382 -10598201 - AluY SINE Alu -14 297 1 4301 114 63 80 chr2 242658382 242659079 -10597504 - L1PA16 LINE L1 -166 6000 5319 1958 181 58 23 chr2 242659191 242659489 -10597094 - L1PA16 LINE L1 -831 5315 4998 1780 160 10 3 chr2 242659489 242659783 -10596800 - AluJb SINE Alu -16 296 1 1958 181 58 23 chr2 242659783 242659996 -10596587 - L1PA16 LINE L1 -1148 4998 4794 335 286 164 23 chr2 242661356 242661527 -10595056 - L2 LINE L2 0 3313 3119 781 188 14 14 chr2 242661617 242661761 -10594822 - AluJb SINE Alu -47 265 122 2085 123 0 3 chr2 242661920 242662228 -10594355 - AluSx SINE Alu 0 312 6 1444 167 3 96 chr2 242662241 242662553 -10594030 - AluJo SINE Alu -25 287 5 25 31 0 0 chr2 242663640 242663672 -10592911 + AT_rich Low_complexity Low_complexity 1 32 0 2027 224 67 30 chr2 242663689 242663861 -10592722 - L1ME1 LINE L1 -5 6161 5997 2266 84 7 0 chr2 242663861 242664158 -10592425 - AluY SINE Alu -12 299 1 2027 224 67 30 chr2 242664158 242664556 -10592027 - L1ME1 LINE L1 -169 5997 5570 652 116 157 16 chr2 242664593 242664714 -10591869 + THE1C LTR MaLR 1 138 -237 340 239 22 0 chr2 242664874 242664966 -10591617 + MER20 DNA MER1_type 126 219 0 319 242 33 0 chr2 242664966 242665055 -10591528 + MER20 DNA MER1_type 128 219 0 356 228 22 0 chr2 242665055 242665145 -10591438 + MER20 DNA MER1_type 128 219 0 385 198 33 0 chr2 242665145 242665234 -10591349 + MER20 DNA MER1_type 128 219 0 317 231 33 0 chr2 242665234 242665323 -10591260 + MER20 DNA MER1_type 128 219 0 335 209 44 11 chr2 242665323 242665412 -10591171 + MER20 DNA MER1_type 128 219 0 275 250 33 11 chr2 242665412 242665502 -10591081 + MER20 DNA MER1_type 128 219 0 348 239 22 0 chr2 242665502 242665592 -10590991 + MER20 DNA MER1_type 128 219 0 341 231 33 0 chr2 242665592 242665681 -10590902 + MER20 DNA MER1_type 128 219 0 366 209 33 0 chr2 242665681 242665770 -10590813 + MER20 DNA MER1_type 128 219 0 341 231 33 0 chr2 242665770 242665859 -10590724 + MER20 DNA MER1_type 128 219 0 340 234 9 36 chr2 242665877 242665988 -10590595 + MER20 DNA MER1_type 112 219 0 325 218 18 45 chr2 242666095 242666205 -10590378 + MER20 DNA MER1_type 112 218 -1 346 234 9 36 chr2 242666224 242666335 -10590248 + MER20 DNA MER1_type 112 219 0 319 242 33 0 chr2 242666335 242666424 -10590159 + MER20 DNA MER1_type 128 219 0 334 239 22 0 chr2 242666424 242666514 -10590069 + MER20 DNA MER1_type 128 219 0 385 198 33 0 chr2 242666514 242666603 -10589980 + MER20 DNA MER1_type 128 219 0 317 231 33 0 chr2 242666603 242666692 -10589891 + MER20 DNA MER1_type 128 219 0 317 231 33 0 chr2 242666692 242666781 -10589802 + MER20 DNA MER1_type 128 219 0 335 209 44 11 chr2 242666781 242666870 -10589713 + MER20 DNA MER1_type 128 219 0 269 283 22 0 chr2 242666870 242666960 -10589623 + MER20 DNA MER1_type 128 219 0 348 239 22 0 chr2 242666960 242667050 -10589533 + MER20 DNA MER1_type 128 219 0 341 231 33 0 chr2 242667050 242667139 -10589444 + MER20 DNA MER1_type 128 219 0 366 209 33 0 chr2 242667139 242667228 -10589355 + MER20 DNA MER1_type 128 219 0 335 231 33 0 chr2 242667228 242667317 -10589266 + MER20 DNA MER1_type 128 219 0 365 228 22 0 chr2 242667317 242667407 -10589176 + MER20 DNA MER1_type 128 219 0 312 231 33 0 chr2 242667407 242667496 -10589087 + MER20 DNA MER1_type 128 219 0 314 233 33 0 chr2 242667496 242667584 -10588999 + MER20 DNA MER1_type 128 218 -1 314 241 23 0 chr2 242667587 242667674 -10588909 + MER20 DNA MER1_type 131 219 0 * 356 220 33 0 chr2 242667674 242667763 -10588820 + MER20 DNA MER1_type 128 219 0 336 216 34 0 chr2 242667763 242667849 -10588734 + MER20 DNA MER1_type 128 216 -3 357 218 23 0 chr2 242667854 242667941 -10588642 + MER20 DNA MER1_type 131 219 0 356 220 33 0 chr2 242667941 242668030 -10588553 + MER20 DNA MER1_type 128 219 0 345 239 22 0 chr2 242668030 242668120 -10588463 + MER20 DNA MER1_type 128 219 0 363 209 33 0 chr2 242668120 242668209 -10588374 + MER20 DNA MER1_type 128 219 0 295 253 33 0 chr2 242668209 242668298 -10588285 + MER20 DNA MER1_type 128 219 0 362 228 22 0 chr2 242668298 242668388 -10588195 + MER20 DNA MER1_type 128 219 0 372 220 22 0 chr2 242668388 242668477 -10588106 + MER20 DNA MER1_type 128 218 -1 360 234 9 36 chr2 242668496 242668607 -10587976 + MER20 DNA MER1_type 112 219 0 320 220 44 11 chr2 242668607 242668696 -10587887 + MER20 DNA MER1_type 128 219 0 244 289 33 0 chr2 242668696 242668784 -10587799 + MER20 DNA MER1_type 128 218 -1 336 203 25 0 chr2 242668795 242668874 -10587709 + MER20 DNA MER1_type 139 219 0 327 242 22 0 chr2 242668874 242668963 -10587620 + MER20 DNA MER1_type 128 218 -1 318 243 9 36 chr2 242668982 242669093 -10587490 + MER20 DNA MER1_type 112 219 0 339 218 23 0 chr2 242669095 242669182 -10587401 + MER20 DNA MER1_type 131 219 0 323 222 33 0 chr2 242669182 242669270 -10587313 + MER20 DNA MER1_type 128 218 -1 314 241 23 0 chr2 242669273 242669360 -10587223 + MER20 DNA MER1_type 131 219 0 * 356 220 33 0 chr2 242669360 242669449 -10587134 + MER20 DNA MER1_type 128 219 0 334 216 34 0 chr2 242669449 242669535 -10587048 + MER20 DNA MER1_type 128 216 -3 335 235 35 0 chr2 242669540 242669625 -10586958 + MER20 DNA MER1_type 131 218 -1 392 216 9 36 chr2 242669644 242669755 -10586828 + MER20 DNA MER1_type 112 219 0 288 220 44 11 chr2 242669755 242669844 -10586739 + MER20 DNA MER1_type 128 219 0 281 242 33 0 chr2 242669844 242669933 -10586650 + MER20 DNA MER1_type 128 219 0 350 225 9 36 chr2 242669951 242670062 -10586521 + MER20 DNA MER1_type 112 219 0 * 351 217 22 0 chr2 242670062 242670152 -10586431 + MER20 DNA MER1_type 128 219 0 315 220 33 0 chr2 242670189 242670280 -10586303 + MER20 DNA MER1_type 126 219 0 313 216 34 0 chr2 242670280 242670366 -10586217 + MER20 DNA MER1_type 128 216 -3 333 218 23 0 chr2 242670371 242670458 -10586125 + MER20 DNA MER1_type 131 219 0 319 230 23 0 chr2 242670460 242670547 -10586036 + MER20 DNA MER1_type 131 219 0 * 321 239 22 0 chr2 242670547 242670637 -10585946 + MER20 DNA MER1_type 128 219 0 318 220 33 0 chr2 242670637 242670726 -10585857 + MER20 DNA MER1_type 128 219 0 274 253 33 0 chr2 242670726 242670815 -10585768 + MER20 DNA MER1_type 128 219 0 339 228 22 0 chr2 242670815 242670905 -10585678 + MER20 DNA MER1_type 128 219 0 349 220 22 0 chr2 242670905 242670994 -10585589 + MER20 DNA MER1_type 128 218 -1 305 252 9 36 chr2 242671013 242671124 -10585459 + MER20 DNA MER1_type 112 219 0 299 235 25 0 chr2 242671132 242671213 -10585370 + MER20 DNA MER1_type 137 219 0 225 289 33 0 chr2 242671213 242671301 -10585282 + MER20 DNA MER1_type 128 218 -1 311 203 25 0 chr2 242671312 242671391 -10585192 + MER20 DNA MER1_type 139 219 0 * 318 231 22 0 chr2 242671391 242671480 -10585103 + MER20 DNA MER1_type 128 218 -1 316 234 9 36 chr2 242671499 242671610 -10584973 + MER20 DNA MER1_type 112 219 0 301 227 34 0 chr2 242671610 242671696 -10584887 + MER20 DNA MER1_type 128 216 -3 301 241 23 0 chr2 242671701 242671788 -10584795 + MER20 DNA MER1_type 131 219 0 306 241 23 0 chr2 242671790 242671877 -10584706 + MER20 DNA MER1_type 131 219 0 * 345 228 22 0 chr2 242671877 242671967 -10584616 + MER20 DNA MER1_type 128 219 0 320 239 22 0 chr2 242671967 242672057 -10584526 + MER20 DNA MER1_type 128 219 0 335 211 35 35 chr2 242672071 242672185 -10584398 + MER20 DNA MER1_type 106 219 0 315 231 33 0 chr2 242672185 242672274 -10584309 + MER20 DNA MER1_type 128 219 0 309 231 33 0 chr2 242672274 242672363 -10584220 + MER20 DNA MER1_type 128 219 0 351 230 10 20 chr2 242672363 242672453 -10584130 + MER20 DNA MER1_type 131 219 0 324 220 33 0 chr2 242672453 242672542 -10584041 + MER20 DNA MER1_type 128 219 0 349 220 22 0 chr2 242672542 242672631 -10583952 + MER20 DNA MER1_type 128 218 -1 315 234 9 36 chr2 242672650 242672761 -10583822 + MER20 DNA MER1_type 112 219 0 277 239 34 0 chr2 242672761 242672847 -10583736 + MER20 DNA MER1_type 128 216 -3 327 218 23 0 chr2 242672852 242672939 -10583644 + MER20 DNA MER1_type 131 219 0 318 231 33 0 chr2 242672939 242673028 -10583555 + MER20 DNA MER1_type 128 219 0 338 228 22 0 chr2 242673028 242673118 -10583465 + MER20 DNA MER1_type 128 219 0 339 209 33 0 chr2 242673118 242673207 -10583376 + MER20 DNA MER1_type 128 219 0 289 253 33 0 chr2 242673207 242673296 -10583287 + MER20 DNA MER1_type 128 219 0 339 228 22 0 chr2 242673296 242673386 -10583197 + MER20 DNA MER1_type 128 219 0 278 231 33 0 chr2 242673386 242673475 -10583108 + MER20 DNA MER1_type 128 219 0 290 233 33 0 chr2 242673475 242673563 -10583020 + MER20 DNA MER1_type 128 218 -1 292 241 23 0 chr2 242673566 242673653 -10582930 + MER20 DNA MER1_type 131 219 0 * 331 220 33 0 chr2 242673653 242673742 -10582841 + MER20 DNA MER1_type 128 219 0 318 250 22 0 chr2 242673742 242673832 -10582751 + MER20 DNA MER1_type 128 219 0 299 235 25 0 chr2 242673840 242673921 -10582662 + MER20 DNA MER1_type 137 219 0 225 289 33 0 chr2 242673921 242674009 -10582574 + MER20 DNA MER1_type 128 218 -1 311 203 25 0 chr2 242674020 242674099 -10582484 + MER20 DNA MER1_type 139 219 0 * 354 217 22 0 chr2 242674099 242674189 -10582394 + MER20 DNA MER1_type 128 219 0 300 217 22 22 chr2 242674189 242674278 -10582305 + MER20 DNA MER1_type 131 219 0 317 254 18 18 chr2 242674278 242674368 -10582215 + MER20 DNA MER1_type 130 219 0 311 231 33 0 chr2 242674368 242674457 -10582126 + MER20 DNA MER1_type 128 219 0 340 209 33 0 chr2 242674457 242674546 -10582037 + MER20 DNA MER1_type 128 219 0 342 209 33 0 chr2 242674546 242674635 -10581948 + MER20 DNA MER1_type 128 219 0 326 250 22 0 chr2 242674635 242674725 -10581858 + MER20 DNA MER1_type 128 219 0 289 226 19 38 chr2 242674743 242674849 -10581734 + MER20 DNA MER1_type 112 215 -4 318 203 25 0 chr2 242674863 242674942 -10581641 + MER20 DNA MER1_type 139 219 0 304 242 33 0 chr2 242674942 242675031 -10581552 + MER20 DNA MER1_type 128 219 0 339 228 22 0 chr2 242675031 242675121 -10581462 + MER20 DNA MER1_type 128 219 0 310 231 33 0 chr2 242675121 242675210 -10581373 + MER20 DNA MER1_type 128 219 0 308 222 33 0 chr2 242675210 242675298 -10581285 + MER20 DNA MER1_type 128 218 -1 262 253 23 0 chr2 242675301 242675388 -10581195 + MER20 DNA MER1_type 131 219 0 * 299 242 33 0 chr2 242675388 242675477 -10581106 + MER20 DNA MER1_type 128 219 0 325 228 20 20 chr2 242675504 242675605 -10580978 + MER20 DNA MER1_type 119 219 0 303 250 22 0 chr2 242675605 242675695 -10580888 + MER20 DNA MER1_type 128 219 0 341 227 11 0 chr2 242675736 242675824 -10580759 + MER20 DNA MER1_type 131 219 0 285 242 33 0 chr2 242675824 242675913 -10580670 + MER20 DNA MER1_type 128 219 0 248 253 23 0 chr2 242675915 242676002 -10580581 + MER20 DNA MER1_type 131 219 0 * 316 220 33 0 chr2 242676002 242676091 -10580492 + MER20 DNA MER1_type 128 219 0 303 231 33 0 chr2 242676091 242676180 -10580403 + MER20 DNA MER1_type 128 219 0 329 209 33 0 chr2 242676180 242676269 -10580314 + MER20 DNA MER1_type 128 219 0 307 239 22 0 chr2 242676269 242676359 -10580224 + MER20 DNA MER1_type 128 219 0 334 228 20 20 chr2 242676386 242676487 -10580096 + MER20 DNA MER1_type 119 219 0 * 345 209 33 0 chr2 242676487 242676576 -10580007 + MER20 DNA MER1_type 128 219 0 318 231 33 0 chr2 242676576 242676665 -10579918 + MER20 DNA MER1_type 128 219 0 306 207 27 54 chr2 242676683 242676794 -10579789 + MER20 DNA MER1_type 112 219 0 * 315 231 33 0 chr2 242676794 242676883 -10579700 + MER20 DNA MER1_type 128 219 0 323 226 21 0 chr2 242676969 242677062 -10579521 + MER20 DNA MER1_type 125 219 0 275 242 33 0 chr2 242677062 242677151 -10579432 + MER20 DNA MER1_type 128 219 0 333 239 22 0 chr2 242677151 242677241 -10579342 + MER20 DNA MER1_type 128 219 0 268 253 33 0 chr2 242677241 242677330 -10579253 + MER20 DNA MER1_type 128 219 0 291 250 36 18 chr2 242677330 242677418 -10579165 + MER20 DNA MER1_type 130 219 0 396 196 22 0 chr2 242677418 242677508 -10579075 + MER20 DNA MER1_type 128 219 0 358 218 9 36 chr2 242677526 242677636 -10578947 + MER20 DNA MER1_type 112 218 -1 315 234 9 36 chr2 242677655 242677766 -10578817 + MER20 DNA MER1_type 112 219 0 299 227 34 0 chr2 242677766 242677852 -10578731 + MER20 DNA MER1_type 128 216 -3 305 230 23 0 chr2 242677857 242677944 -10578639 + MER20 DNA MER1_type 131 219 0 * 318 231 33 0 chr2 242677944 242678033 -10578550 + MER20 DNA MER1_type 128 219 0 338 228 22 0 chr2 242678033 242678123 -10578460 + MER20 DNA MER1_type 128 219 0 1429 129 0 0 chr2 242678252 242678445 -10578138 - AluSc SINE Alu -116 193 1 2406 100 0 0 chr2 242678712 242679011 -10577572 + AluSx SINE Alu 1 299 -13 3865 103 50 30 chr2 242679182 242679784 -10576799 + LTR18B LTR ERVL 1 614 0 262 326 54 11 chr2 242680072 242680164 -10576419 - MIR SINE MIR -164 98 3 644 251 84 51 chr2 242680915 242681023 -10575560 + MIR SINE MIR 41 144 -118 2319 100 0 0 chr2 242681023 242681323 -10575260 + AluSc SINE Alu 1 300 -9 644 251 84 51 chr2 242681323 242681429 -10575154 + MIR SINE MIR 144 262 0 418 265 7 34 chr2 242681649 242681796 -10574787 + MLT1H LTR MaLR 45 187 -362 2112 136 10 10 chr2 242682273 242682581 -10574002 + AluJb SINE Alu 3 310 -2 2583 121 76 0 chr2 242683239 242683636 -10572947 + MSTA LTR MaLR 2 428 0 2214 122 3 0 chr2 242684635 242684930 -10571653 - AluSq SINE Alu -17 296 1 1681 185 7 0 chr2 242684937 242685223 -10571360 - AluJo SINE Alu -4 308 21 286 230 120 58 chr2 242685231 242685422 -10571161 + L1M4 LINE L1 3699 3901 -2245 197 274 0 0 chr2 242685423 242685474 -10571109 + MER5B DNA MER1_type 1 51 -127 1281 159 10 0 chr2 242685505 242685706 -10570877 + AluSx SINE Alu 1 203 -109 2585 149 113 33 chr2 242685714 242686236 -10570347 - LTR6A LTR ERV1 0 564 1 1703 97 4 4 chr2 242686236 242686464 -10570119 + AluSq SINE Alu 73 300 -13 688 177 113 0 chr2 242686484 242686608 -10569975 + FLAM_C SINE Alu 2 139 -4 345 295 54 23 chr2 242687028 242687157 -10569426 - MIR SINE MIR -60 202 70 464 303 0 0 chr2 242687517 242687639 -10568944 - L2 LINE L2 0 3313 3192 617 163 7 109 chr2 242687889 242688036 -10568547 - FLAM_C SINE Alu -1 132 1 1382 117 54 0 chr2 242688058 242688263 -10568320 + AluJb SINE Alu 84 299 -13 2261 105 7 0 chr2 242688263 242688567 -10568016 + AluSq SINE Alu 1 306 -7 2049 101 49 7 chr2 242690031 242690317 -10566266 + AluSx SINE Alu 1 298 -14 1003 171 0 0 chr2 242690347 242690505 -10566078 + FRAM SINE Alu 1 152 -24 250 184 0 0 chr2 242690506 242690555 -10566028 + L1MB8 LINE L1 6130 6178 0 1753 234 34 26 chr2 242690615 242691114 -10565469 - MLT1D LTR MaLR -2 503 1 2306 121 0 9 chr2 242691299 242691614 -10564969 - AluSx SINE Alu 0 312 1 1355 186 58 101 chr2 242691914 242692328 -10564255 - MSTD LTR MaLR 0 396 1 207 0 0 0 chr2 242693093 242693116 -10563467 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 2373 84 0 10 chr2 242693916 242694214 -10562369 + AluSx SINE Alu 6 300 -12 689 212 146 0 chr2 242694273 242694438 -10562145 + MER5A DNA MER1_type 1 189 0 2280 92 17 3 chr2 242694816 242695109 -10561474 + AluSq SINE Alu 1 297 -16 1871 147 49 0 chr2 242695125 242695411 -10561172 + AluJb SINE Alu 1 300 -12 2257 83 11 0 chr2 242695441 242695718 -10560865 + AluSc SINE Alu 12 291 -18 2376 102 0 10 chr2 242696253 242696566 -10560017 - AluSg SINE Alu 0 310 1 1716 161 32 7 chr2 242696566 242696850 -10559733 - AluJb SINE Alu -11 301 10 2426 95 0 3 chr2 242696912 242697217 -10559366 - AluSq SINE Alu -9 304 1 292 240 133 0 chr2 242697241 242697316 -10559267 + L2 LINE L2 3229 3313 0 2435 98 0 3 chr2 242697417 242697724 -10558859 - AluSq SINE Alu -7 306 1 1777 154 3 39 chr2 242698365 242698671 -10557912 - AluJb SINE Alu -17 295 1 2251 123 0 0 chr2 242699033 242699341 -10557242 + AluSx SINE Alu 1 308 -4 2333 109 0 0 chr2 242699685 242699988 -10556595 - AluY SINE Alu -8 303 1 1174 67 0 0 chr2 242699988 242700122 -10556461 - AluY SINE Alu -177 134 1 289 270 127 58 chr2 242700163 242700352 -10556231 + L1ME LINE L1 5500 5701 -420 2252 111 26 7 chr2 242700369 242700675 -10555908 - AluSx SINE Alu 0 312 1 201 74 0 0 chr2 242701695 242701722 -10554861 + (TG)n Simple_repeat Simple_repeat 2 28 0 * 255 200 52 0 chr2 242701719 242701834 -10554749 + (TCTCTG)n Simple_repeat Simple_repeat 2 122 0 2409 103 0 0 chr2 242702053 242702355 -10554228 - AluSx SINE Alu -10 302 1 562 249 177 24 chr2 242702599 242702848 -10553735 + L2 LINE L2 3026 3312 -1 231 299 96 62 chr2 242703037 242703549 -10553034 - L1M4 LINE L1 -1480 4666 4138 311 261 52 17 chr2 242703609 242703724 -10552859 + L1M4 LINE L1 2922 3040 -3106 2292 116 0 0 chr2 242705577 242705871 -10550712 + AluSx SINE Alu 1 294 -18 2153 135 0 6 chr2 242705932 242706243 -10550340 - AluJb SINE Alu -3 309 1 1108 224 133 30 chr2 242706289 242706520 -10550063 - MLT1J1 LTR MaLR -4 442 236 276 30 0 0 chr2 242706520 242706553 -10550030 + (CA)n Simple_repeat Simple_repeat 2 34 0 1108 224 133 30 chr2 242706553 242706719 -10549864 - MLT1J1 LTR MaLR -210 236 4 452 248 77 61 chr2 242706719 242706996 -10549587 - MER34C LTR ERV1 0 739 336 306 214 3 0 chr2 242707126 242707200 -10549383 - MER34C LTR ERV1 -467 98 1 2427 94 7 0 chr2 242707397 242707706 -10548877 - AluSq SINE Alu -2 311 1 1187 111 0 78 chr2 242708433 242708477 -10548106 - AluSx SINE Alu -146 166 120 2195 121 0 37 chr2 242708477 242708654 -10547929 - AluSx SINE Alu -2 310 149 2467 64 0 0 chr2 242708654 242708949 -10547634 - AluY SINE Alu -16 295 1 2195 121 0 37 chr2 242708949 242709093 -10547490 - AluSx SINE Alu -163 149 1 1187 111 0 78 chr2 242709093 242709228 -10547355 - AluSx SINE Alu -192 120 1 1200 117 15 5 chr2 242709228 242709425 -10547158 + MER6 DNA MER2_type 666 864 -1 1016 207 149 29 chr2 242709426 242709774 -10546809 - MLT1C LTR MaLR -32 435 46 235 269 0 0 chr2 242709795 242709847 -10546736 + MIR SINE MIR 211 262 0 2314 89 17 0 chr2 242710299 242710590 -10545993 - AluSp SINE Alu -17 296 1 2019 110 3 60 chr2 242710607 242710907 -10545676 - AluSx SINE Alu -29 283 1 283 277 32 21 chr2 242711327 242711421 -10545162 + MLT1L LTR MaLR 3 97 -518 598 261 86 20 chr2 242711595 242711840 -10544743 + MLT1L LTR MaLR 348 608 -7 603 212 91 114 chr2 242711846 242712266 -10544317 - MLT1K LTR MaLR -20 568 159 50 52 0 10 chr2 242713091 242713153 -10543430 + AT_rich Low_complexity Low_complexity 1 63 -32 2342 51 3 27 chr2 242713153 242713445 -10543138 + AluY SINE Alu 1 285 -26 50 52 0 10 chr2 242713445 242713478 -10543105 + AT_rich Low_complexity Low_complexity 63 95 0 1917 112 0 0 chr2 242713711 242713969 -10542614 - AluSx SINE Alu -15 297 40 768 235 107 44 chr2 242713975 242714341 -10542242 - L1MC5 LINE L1 -433 7528 7140 1423 199 80 76 chr2 242714514 242714847 -10541736 - L1MC5 LINE L1 -786 7175 6838 2189 129 0 3 chr2 242714847 242715150 -10541433 - AluSx SINE Alu -10 302 1 1423 199 80 76 chr2 242715150 242715343 -10541240 - L1MC5 LINE L1 -1123 6838 6647 2235 102 34 7 chr2 242715397 242715690 -10540893 - AluSx SINE Alu -10 302 2 255 167 0 0 chr2 242715698 242715752 -10540831 + LTR41 LTR ERVL 705 758 -15 480 313 64 53 chr2 242715799 242716165 -10540418 - HAL1b LINE L1 -1104 1320 61 3606 196 40 75 chr2 242716357 242716549 -10540034 + L1M4 LINE L1 4223 4420 -1726 1831 91 0 0 chr2 242716549 242716779 -10539804 + AluSg/x SINE Alu 79 308 -2 3606 196 40 75 chr2 242716779 242717440 -10539143 + L1M4 LINE L1 4420 5028 -1118 2380 94 3 0 chr2 242717440 242717737 -10538846 - AluSx SINE Alu -14 298 1 3606 196 40 75 chr2 242717737 242718037 -10538546 + L1M4 LINE L1 5028 5337 -809 838 153 0 21 chr2 242718507 242718651 -10537932 - AluSg/x SINE Alu 0 312 172 2013 115 11 0 chr2 242718939 242719217 -10537366 + AluSq SINE Alu 1 281 -32 180 0 0 0 chr2 242719217 242719237 -10537346 + (CAAA)n Simple_repeat Simple_repeat 4 23 0 2167 100 0 24 chr2 242719636 242719926 -10536657 + AluSq SINE Alu 1 283 -30 1023 102 0 0 chr2 242719799 242719926 -10536657 + AluSp/q SINE Alu 157 316 0 277 30 0 0 chr2 242719926 242719959 -10536624 + (GAAAA)n Simple_repeat Simple_repeat 4 135 0 433 198 41 0 chr2 242720425 242720638 -10535945 + CT-rich Low_complexity Low_complexity 1 221 0 * 446 319 75 58 chr2 242720524 242720749 -10535834 - L1MC4a LINE L1 -1716 6092 5857 2545 77 0 0 chr2 242720749 242721060 -10535523 - AluY SINE Alu 0 311 1 446 319 75 58 chr2 242721060 242721182 -10535401 - L1MC4a LINE L1 -1951 5857 5739 259 245 96 68 chr2 242721252 242721501 -10535082 - L1MC4a LINE L1 -2447 5548 5293 2257 125 0 0 chr2 242721521 242721824 -10534759 - AluSx SINE Alu -6 306 4 26 50 0 0 chr2 242721972 242722012 -10534571 + AT_rich Low_complexity Low_complexity 1 40 0 262 275 101 9 chr2 242722043 242722152 -10534431 - L1P LINE L1 -1127 5019 4901 2434 103 3 0 chr2 242722235 242722547 -10534036 - AluSq SINE Alu 0 313 1 1776 147 33 39 chr2 242722549 242722856 -10533727 - AluSx SINE Alu -3 309 5 2462 77 0 6 chr2 242723093 242723405 -10533178 - AluY SINE Alu -1 310 1 346 324 80 23 chr2 242723419 242723857 -10532726 - L1MC4a LINE L1 -2057 4089 3627 2150 118 3 14 chr2 242723859 242724178 -10532405 + AluSq SINE Alu 1 313 0 1886 185 10 16 chr2 242724209 242724593 -10531990 + L1M4 LINE L1 5316 5697 -487 1826 171 24 0 chr2 242725930 242726223 -10530360 - AluJb SINE Alu -12 300 1 1629 149 0 8 chr2 242726252 242726493 -10530090 + AluSx SINE Alu 1 239 -73 681 163 0 0 chr2 242726593 242726691 -10529892 - AluJ/FLAM SINE Alu -213 99 2 859 270 88 67 chr2 242726691 242726738 -10529845 - L2 LINE L2 -11 3302 3257 2215 95 0 7 chr2 242726738 242727021 -10529562 + AluSx SINE Alu 15 295 -17 859 270 88 67 chr2 242727021 242727347 -10529236 - L2 LINE L2 -56 3257 2921 289 265 13 66 chr2 242727369 242727520 -10529063 - L2 LINE L2 -652 2662 2520 189 0 0 0 chr2 242727714 242727735 -10528848 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 1551 122 81 0 chr2 242727738 242727959 -10528624 - AluSx SINE Alu -36 276 38 319 279 91 52 chr2 242727987 242728141 -10528442 - MIR SINE MIR -12 250 91 2233 118 0 0 chr2 242728338 242728634 -10527949 - AluSx SINE Alu -16 296 1 277 349 47 0 chr2 242728903 242729009 -10527574 - L2 LINE L2 -9 3263 3153 250 284 187 8 chr2 242729786 242729920 -10526663 - MIR SINE MIR -70 192 35 1996 180 33 68 chr2 242730056 242730145 -10526438 - L1MB8 LINE L1 0 6178 6087 2608 50 0 0 chr2 242730145 242730443 -10526140 - AluY SINE Alu -13 298 1 2257 116 3 3 chr2 242730443 242730746 -10525837 - AluSx SINE Alu -9 303 1 1996 180 33 68 chr2 242730746 242730992 -10525591 - L1MB8 LINE L1 -90 6088 5835 2355 93 0 3 chr2 242730992 242731294 -10525289 - AluSq SINE Alu -12 301 1 1876 173 3 13 chr2 242731294 242731605 -10524978 - AluJo SINE Alu -3 309 1 1996 180 33 68 chr2 242731605 242731806 -10524777 - L1MB8 LINE L1 -341 5837 5658 2260 109 0 0 chr2 242731957 242732250 -10524333 + AluSq SINE Alu 1 293 -20 181 221 87 87 chr2 242732819 242732923 -10523660 + L2 LINE L2 3139 3242 -30 396 0 0 0 chr2 242733100 242733144 -10523439 + (CA)n Simple_repeat Simple_repeat 2 45 0 354 306 109 62 chr2 242733553 242733857 -10522726 + L1MEc LINE L1 2162 2479 -3917 477 204 0 0 chr2 242733944 242734037 -10522546 + MLT1I LTR MaLR 315 407 -2 366 259 78 101 chr2 242734244 242734641 -10521942 + L1MEc LINE L1 2842 3229 -2986 2089 98 64 7 chr2 242734707 242735002 -10521581 - AluSx SINE Alu 0 312 1 239 261 11 34 chr2 242736156 242736244 -10520339 + LTR33 LTR ERVL 105 190 -331 1752 154 97 0 chr2 242736478 242736757 -10519826 - AluJo SINE Alu -6 306 1 1718 150 17 14 chr2 242738405 242738417 -10518166 - AluJo SINE Alu -18 294 284 207 69 0 0 chr2 242738417 242738446 -10518137 + (TG)n Simple_repeat Simple_repeat 2 30 0 1718 150 17 14 chr2 242738446 242738726 -10517857 - AluJo SINE Alu -28 284 1 2148 103 7 3 chr2 242739556 242739847 -10516736 - AluSx SINE Alu -20 292 1 245 233 194 32 chr2 242739898 242740047 -10516536 + MER5A DNA MER1_type 1 174 -4 24 67 0 0 chr2 242740245 242740290 -10516293 + AT_rich Low_complexity Low_complexity 1 45 0 42 48 0 0 chr2 242740417 242740480 -10516103 + AT_rich Low_complexity Low_complexity 1 63 0 186 43 0 0 chr2 242740541 242740564 -10516019 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 231 290 221 0 chr2 242741056 242741186 -10515397 + MIR3 SINE MIR 15 174 -88 249 287 168 0 chr2 242743516 242743617 -10512966 + MIR SINE MIR 35 152 -110 24 53 0 0 chr2 242744827 242744865 -10511718 + GC_rich Low_complexity Low_complexity 1 38 0 307 239 66 4 chr2 242745068 242745170 -10511413 - MIR SINE MIR -61 147 37 255 308 77 39 chr2 242747530 242747764 -10508819 - L2 LINE L2 -146 3126 2884 268 231 0 15 chr2 242748675 242748740 -10507843 + MIR SINE MIR 76 139 -69 1873 98 25 0 chr2 242750795 242751039 -10505544 - AluSx SINE Alu -62 250 1 241 203 16 16 chr2 242751040 242751104 -10505479 + LTR67 LTR ERVL 472 535 -22 200 277 0 15 chr2 242752302 242752367 -10504216 + L2 LINE L2 3191 3254 -18 495 253 18 0 chr2 242754280 242754450 -10502133 + CT-rich Low_complexity Low_complexity 3 175 0 238 222 74 0 chr2 242754777 242754831 -10501752 + L2 LINE L2 3202 3259 -54 195 289 216 0 chr2 242754899 242754996 -10501587 - MIR SINE MIR -108 154 37 30 69 0 0 chr2 242755390 242755448 -10501135 + AT_rich Low_complexity Low_complexity 1 58 0 872 177 44 0 chr2 242755483 242755641 -10500942 - AluSg/x SINE Alu -11 301 137 326 283 91 91 chr2 242755650 242755705 -10500878 - L1 LINE L1 -3315 2831 2777 1386 161 8 8 chr2 242755705 242755941 -10500642 - MER46A DNA MER2_type 0 236 1 326 283 91 91 chr2 242755941 242755972 -10500611 - L1 LINE L1 -3369 2777 2747 1762 147 9 89 chr2 242755972 242756157 -10500426 - AluJb SINE Alu -11 301 152 2246 116 0 7 chr2 242756157 242756459 -10500124 - AluSc SINE Alu -9 300 1 1762 147 9 89 chr2 242756459 242756600 -10499983 - AluJb SINE Alu -160 152 1 326 283 91 91 chr2 242756600 242756699 -10499884 - L1 LINE L1 -3398 2748 2645 339 294 47 79 chr2 242757301 242757515 -10499068 - MLT1K LTR MaLR -381 207 1 315 209 120 70 chr2 242757525 242757683 -10498900 + MLT1K LTR MaLR 187 352 -236 241 254 45 0 chr2 242757744 242757811 -10498772 + MLT1K LTR MaLR 519 588 0 22 0 0 0 chr2 242757834 242757856 -10498727 + AT_rich Low_complexity Low_complexity 1 22 0 327 208 42 0 chr2 242757875 242757947 -10498636 - MIR SINE MIR -159 103 29 25 31 0 0 chr2 242758097 242758129 -10498454 + AT_rich Low_complexity Low_complexity 1 32 0 1493 168 50 64 chr2 242758294 242758591 -10497992 + AluSg SINE Alu 1 293 -17 336 211 8 170 chr2 242758641 242759005 -10497578 - L1ME4a LINE L1 -97 6024 5718 2826 155 20 6 chr2 242760814 242761310 -10495273 - L1MB7 LINE L1 -9 6175 5673 2008 123 17 10 chr2 242761321 242761614 -10494969 - AluSx SINE Alu -5 307 13 902 203 94 38 chr2 242761769 242761981 -10494602 - MIR SINE MIR -17 245 22 2130 108 56 0 chr2 242762831 242763119 -10493464 - AluSx SINE Alu -8 304 1 1018 112 8 0 chr2 242763119 242763253 -10493330 - AluSq/x SINE Alu -177 135 1 180 0 0 0 chr2 242763264 242763284 -10493299 + (T)n Simple_repeat Simple_repeat 1 20 0 2256 120 0 0 chr2 242763411 242763710 -10492873 - AluSx SINE Alu -13 299 1 28 0 0 0 chr2 242763710 242763738 -10492845 + AT_rich Low_complexity Low_complexity 1 28 0 360 301 30 20 chr2 242763831 242764034 -10492549 + L1MB7 LINE L1 4487 4691 -1455 1995 133 0 60 chr2 242764215 242764546 -10492037 + AluSx SINE Alu 1 311 -1 2288 109 0 0 chr2 242765588 242765892 -10490691 + AluSx SINE Alu 1 304 -8 336 184 53 13 chr2 242766161 242766237 -10490346 - MIR SINE MIR -67 195 117 2751 109 34 65 chr2 242766714 242767124 -10489459 - L1MA8 LINE L1 -5 6286 5865 2005 146 3 0 chr2 242767124 242767419 -10489164 - AluJb SINE Alu -16 296 1 2751 109 34 65 chr2 242767419 242767480 -10489103 - L1MA8 LINE L1 -426 5865 5830 2607 63 0 16 chr2 242767480 242767796 -10488787 - AluY SINE Alu 0 311 1 2751 109 34 65 chr2 242767796 242767847 -10488736 - L1MA8 LINE L1 -461 5830 5779 1925 137 53 10 chr2 242767849 242768149 -10488434 - AluSq SINE Alu 0 313 1 411 276 65 49 chr2 242768419 242768604 -10487979 + L1ME LINE L1 5547 5734 -387 380 267 9 0 chr2 242768645 242768750 -10487833 + L1ME LINE L1 5652 5757 -364 4067 170 39 46 chr2 242768904 242770328 -10486255 + L1MB7 LINE L1 4709 6141 -43 1821 167 0 17 chr2 242770328 242770615 -10485968 + AluJb SINE Alu 1 282 -30 221 0 35 0 chr2 242770621 242770650 -10485933 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 4067 170 39 46 chr2 242770650 242770684 -10485899 + L1MB7 LINE L1 6146 6165 -19 237 178 0 0 chr2 242770737 242770782 -10485801 + (TCTA)n Simple_repeat Simple_repeat 2 46 0 24 0 0 0 chr2 242771051 242771075 -10485508 + AT_rich Low_complexity Low_complexity 1 24 0 304 266 76 104 chr2 242771282 242771612 -10484971 - L1M4 LINE L1 -2691 3455 3098 24 53 0 0 chr2 242771612 242771650 -10484933 + AT_rich Low_complexity Low_complexity 1 38 0 304 266 76 104 chr2 242771650 242771677 -10484906 - L1M4 LINE L1 -3048 3098 3072 213 315 41 0 chr2 242771991 242772064 -10484519 - MIR3 SINE MIR -37 171 96 384 270 55 37 chr2 242772496 242772659 -10483924 - L1M4 LINE L1 -3871 2275 2110 2107 112 0 10 chr2 242772771 242773075 -10483508 - AluSg SINE Alu -9 301 1 1113 50 31 0 chr2 242773160 242773319 -10483264 + (TTTC)n Simple_repeat Simple_repeat 3 166 0 2027 114 0 0 chr2 242773319 242773599 -10482984 - AluSx SINE Alu -32 280 1 1616 146 3 65 chr2 242774114 242774422 -10482161 - AluJb SINE Alu -23 289 1 1097 184 39 30 chr2 242774489 242774722 -10481861 - MIR SINE MIR -26 236 2 640 124 52 0 chr2 242775154 242775251 -10481332 - AluSg/x SINE Alu -13 296 195 2227 103 0 13 chr2 242775510 242775822 -10480761 + AluSc SINE Alu 1 308 -1 180 211 10 115 chr2 242776432 242776536 -10480047 - L2 LINE L2 -799 2515 2423 1723 198 16 25 chr2 242776668 242777036 -10479547 + MLT1A1 LTR MaLR 1 365 0 406 89 0 41 chr2 242777351 242777588 -10478995 + AluSc SINE Alu 2 293 -16 2190 101 0 3 chr2 242777808 242778116 -10478467 - AluSx SINE Alu -5 307 1 2043 76 62 3 chr2 242778485 242778776 -10477807 + AluSc SINE Alu 1 308 -1 666 163 0 16 chr2 242778885 242779008 -10477575 + FLAM_C SINE Alu 22 142 -1 1730 176 79 0 chr2 242779029 242779359 -10477224 + L1MB3 LINE L1 5551 5906 -265 1001 168 6 0 chr2 242779361 242779534 -10477049 + FRAM SINE Alu 1 171 -5 1269 182 4 0 chr2 242779536 242779767 -10476816 + L1MB3 LINE L1 5907 6138 -45 1944 125 10 0 chr2 242779796 242780092 -10476491 + AluSx SINE Alu 14 312 0 242 56 127 0 chr2 242780092 242780136 -10476447 + L1MB3 LINE L1 6130 6178 -2 297 0 0 0 chr2 242780331 242780364 -10476219 + (A)n Simple_repeat Simple_repeat 1 33 0 2245 95 3 0 chr2 242780825 242781121 -10475462 - AluSq SINE Alu -16 297 1 957 115 0 7 chr2 242781123 242781271 -10475312 - AluSg/x SINE Alu -3 309 163 330 376 82 15 chr2 242781518 242781861 -10474722 + L2 LINE L2 2871 3236 -36 490 270 63 0 chr2 242782066 242782192 -10474391 - MIR SINE MIR -5 257 124 876 169 26 0 chr2 242782416 242782570 -10474013 - AluSg/x SINE Alu -17 293 136 881 255 10 13 chr2 242782613 242782855 -10473728 + MLT1F1 LTR MaLR 1 234 -321 471 260 167 5 chr2 242782902 242783094 -10473489 + MLT1F1 LTR MaLR 371 593 -2 255 31 0 0 chr2 242783480 242783512 -10473071 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 1837 108 27 0 chr2 242783528 242783786 -10472797 - AluSq SINE Alu -48 265 1 341 203 47 0 chr2 242783791 242783855 -10472728 + MER20 DNA MER1_type 1 67 -152 5190 142 74 55 chr2 242783863 242784683 -10471900 - L1MD2 LINE L1 -16 6343 5456 249 186 0 0 chr2 242784683 242784726 -10471857 + 5S rRNA rRNA 1 43 -78 5190 142 74 55 chr2 242784726 242784933 -10471650 - L1MD2 LINE L1 -903 5456 5254 847 166 11 40 chr2 242784942 242785117 -10471466 + MER20 DNA MER1_type 50 219 0 370 198 33 0 chr2 242785117 242785206 -10471377 + MER20 DNA MER1_type 128 219 0 402 206 22 0 chr2 242785206 242785296 -10471287 + MER20 DNA MER1_type 128 219 0 384 217 22 0 chr2 242785296 242785386 -10471197 + MER20 DNA MER1_type 128 219 0 331 239 22 0 chr2 242785386 242785476 -10471107 + MER20 DNA MER1_type 128 219 0 366 209 33 0 chr2 242785476 242785565 -10471018 + MER20 DNA MER1_type 128 219 0 366 209 33 0 chr2 242785565 242785654 -10470929 + MER20 DNA MER1_type 128 219 0 341 231 33 0 chr2 242785654 242785743 -10470840 + MER20 DNA MER1_type 128 219 0 340 234 9 36 chr2 242785761 242785872 -10470711 + MER20 DNA MER1_type 112 219 0 325 218 18 45 chr2 242785979 242786089 -10470494 + MER20 DNA MER1_type 112 218 -1 372 225 9 36 chr2 242786108 242786219 -10470364 + MER20 DNA MER1_type 112 219 0 319 242 33 0 chr2 242786219 242786308 -10470275 + MER20 DNA MER1_type 128 219 0 356 228 22 0 chr2 242786308 242786398 -10470185 + MER20 DNA MER1_type 128 219 0 385 198 33 0 chr2 242786398 242786487 -10470096 + MER20 DNA MER1_type 128 219 0 317 231 33 0 chr2 242786487 242786576 -10470007 + MER20 DNA MER1_type 128 219 0 317 231 33 0 chr2 242786576 242786665 -10469918 + MER20 DNA MER1_type 128 219 0 335 209 44 11 chr2 242786665 242786754 -10469829 + MER20 DNA MER1_type 128 219 0 275 250 33 11 chr2 242786754 242786844 -10469739 + MER20 DNA MER1_type 128 219 0 348 239 22 0 chr2 242786844 242786934 -10469649 + MER20 DNA MER1_type 128 219 0 341 231 33 0 chr2 242786934 242787023 -10469560 + MER20 DNA MER1_type 128 219 0 366 209 33 0 chr2 242787023 242787112 -10469471 + MER20 DNA MER1_type 128 219 0 373 217 22 0 chr2 242787112 242787202 -10469381 + MER20 DNA MER1_type 128 219 0 341 220 33 0 chr2 242787202 242787291 -10469292 + MER20 DNA MER1_type 128 219 0 345 220 33 0 chr2 242787291 242787380 -10469203 + MER20 DNA MER1_type 128 219 0 381 246 18 18 chr2 242787380 242787470 -10469113 + MER20 DNA MER1_type 130 219 0 316 233 44 0 chr2 242787470 242787558 -10469025 + MER20 DNA MER1_type 128 219 0 424 196 22 0 chr2 242787558 242787648 -10468935 + MER20 DNA MER1_type 128 219 0 316 242 33 0 chr2 242787648 242787737 -10468846 + MER20 DNA MER1_type 128 219 0 382 216 9 36 chr2 242787755 242787866 -10468717 + MER20 DNA MER1_type 112 219 0 343 236 9 36 chr2 242787973 242788083 -10468500 + MER20 DNA MER1_type 112 218 -1 372 225 9 36 chr2 242788102 242788213 -10468370 + MER20 DNA MER1_type 112 219 0 319 242 33 0 chr2 242788213 242788302 -10468281 + MER20 DNA MER1_type 128 219 0 356 228 22 0 chr2 242788302 242788392 -10468191 + MER20 DNA MER1_type 128 219 0 385 198 33 0 chr2 242788392 242788481 -10468102 + MER20 DNA MER1_type 128 219 0 317 231 33 0 chr2 242788481 242788570 -10468013 + MER20 DNA MER1_type 128 219 0 356 220 33 0 chr2 242788570 242788659 -10467924 + MER20 DNA MER1_type 128 219 0 265 283 22 0 chr2 242788659 242788749 -10467834 + MER20 DNA MER1_type 128 219 0 339 250 22 0 chr2 242788749 242788839 -10467744 + MER20 DNA MER1_type 128 219 0 341 231 33 0 chr2 242788839 242788928 -10467655 + MER20 DNA MER1_type 128 219 0 366 209 33 0 chr2 242788928 242789017 -10467566 + MER20 DNA MER1_type 128 219 0 373 217 22 0 chr2 242789017 242789107 -10467476 + MER20 DNA MER1_type 128 219 0 349 220 33 0 chr2 242789107 242789196 -10467387 + MER20 DNA MER1_type 128 219 0 318 231 33 0 chr2 242789196 242789285 -10467298 + MER20 DNA MER1_type 128 219 0 381 246 18 18 chr2 242789285 242789375 -10467208 + MER20 DNA MER1_type 130 219 0 320 233 44 0 chr2 242789375 242789463 -10467120 + MER20 DNA MER1_type 128 219 0 414 210 10 20 chr2 242789463 242789553 -10467030 + MER20 DNA MER1_type 131 219 0 281 264 33 0 chr2 242789553 242789642 -10466941 + MER20 DNA MER1_type 128 219 0 382 216 9 36 chr2 242789660 242789771 -10466812 + MER20 DNA MER1_type 112 219 0 381 227 9 36 chr2 242789878 242789988 -10466595 + MER20 DNA MER1_type 112 218 -1 392 216 9 36 chr2 242790007 242790118 -10466465 + MER20 DNA MER1_type 112 219 0 288 220 44 11 chr2 242790118 242790207 -10466376 + MER20 DNA MER1_type 128 219 0 301 242 33 0 chr2 242790207 242790296 -10466287 + MER20 DNA MER1_type 128 219 0 377 225 9 36 chr2 242790314 242790425 -10466158 + MER20 DNA MER1_type 112 219 0 376 217 22 0 chr2 242790425 242790515 -10466068 + MER20 DNA MER1_type 128 219 0 307 231 33 0 chr2 242790552 242790643 -10465940 + MER20 DNA MER1_type 126 219 0 * 373 217 22 0 chr2 242790643 242790733 -10465850 + MER20 DNA MER1_type 128 219 0 324 217 22 22 chr2 242790733 242790822 -10465761 + MER20 DNA MER1_type 131 219 0 347 228 35 35 chr2 242790822 242790912 -10465671 + MER20 DNA MER1_type 130 219 0 311 242 33 0 chr2 242790912 242791001 -10465582 + MER20 DNA MER1_type 128 219 0 351 237 26 18 chr2 242791001 242791090 -10465493 + MER20 DNA MER1_type 130 219 0 367 209 33 0 chr2 242791090 242791179 -10465404 + MER20 DNA MER1_type 128 219 0 350 250 22 0 chr2 242791179 242791269 -10465314 + MER20 DNA MER1_type 128 219 0 315 226 19 38 chr2 242791287 242791393 -10465190 + MER20 DNA MER1_type 112 215 -4 342 203 25 0 chr2 242791407 242791486 -10465097 + MER20 DNA MER1_type 139 219 0 326 242 33 0 chr2 242791486 242791575 -10465008 + MER20 DNA MER1_type 128 219 0 362 228 22 0 chr2 242791575 242791665 -10464918 + MER20 DNA MER1_type 128 219 0 325 231 33 0 chr2 242791665 242791754 -10464829 + MER20 DNA MER1_type 128 219 0 342 220 33 0 chr2 242791754 242791843 -10464740 + MER20 DNA MER1_type 128 219 0 349 220 33 0 chr2 242791843 242791932 -10464651 + MER20 DNA MER1_type 128 219 0 372 220 22 0 chr2 242791932 242792021 -10464562 + MER20 DNA MER1_type 128 218 -1 343 234 9 36 chr2 242792040 242792151 -10464432 + MER20 DNA MER1_type 112 219 0 322 227 34 0 chr2 242792151 242792237 -10464346 + MER20 DNA MER1_type 128 216 -3 351 218 23 0 chr2 242792242 242792329 -10464254 + MER20 DNA MER1_type 131 219 0 323 231 33 0 chr2 242792329 242792418 -10464165 + MER20 DNA MER1_type 128 219 0 362 228 22 0 chr2 242792418 242792508 -10464075 + MER20 DNA MER1_type 128 219 0 348 220 33 0 chr2 242792508 242792597 -10463986 + MER20 DNA MER1_type 128 219 0 310 253 33 0 chr2 242792597 242792686 -10463897 + MER20 DNA MER1_type 128 219 0 365 228 22 0 chr2 242792686 242792776 -10463807 + MER20 DNA MER1_type 128 219 0 300 231 33 0 chr2 242792776 242792865 -10463718 + MER20 DNA MER1_type 128 219 0 314 233 33 0 chr2 242792865 242792953 -10463630 + MER20 DNA MER1_type 128 218 -1 314 241 23 0 chr2 242792956 242793043 -10463540 + MER20 DNA MER1_type 131 219 0 * 356 220 33 0 chr2 242793043 242793132 -10463451 + MER20 DNA MER1_type 128 219 0 336 216 34 0 chr2 242793132 242793218 -10463365 + MER20 DNA MER1_type 128 216 -3 357 218 23 0 chr2 242793223 242793310 -10463273 + MER20 DNA MER1_type 131 219 0 342 230 23 0 chr2 242793312 242793399 -10463184 + MER20 DNA MER1_type 131 219 0 * 345 239 22 0 chr2 242793399 242793489 -10463094 + MER20 DNA MER1_type 128 219 0 341 220 33 0 chr2 242793489 242793578 -10463005 + MER20 DNA MER1_type 128 219 0 306 253 33 0 chr2 242793578 242793667 -10462916 + MER20 DNA MER1_type 128 219 0 362 228 22 0 chr2 242793667 242793757 -10462826 + MER20 DNA MER1_type 128 219 0 372 220 22 0 chr2 242793757 242793846 -10462737 + MER20 DNA MER1_type 128 218 -1 336 243 9 36 chr2 242793865 242793976 -10462607 + MER20 DNA MER1_type 112 219 0 319 217 48 0 chr2 242793982 242794065 -10462518 + MER20 DNA MER1_type 133 219 0 244 289 33 0 chr2 242794065 242794153 -10462430 + MER20 DNA MER1_type 128 218 -1 336 203 25 0 chr2 242794164 242794243 -10462340 + MER20 DNA MER1_type 139 219 0 * 341 231 22 0 chr2 242794243 242794332 -10462251 + MER20 DNA MER1_type 128 218 -1 343 234 9 36 chr2 242794351 242794462 -10462121 + MER20 DNA MER1_type 112 219 0 325 227 34 0 chr2 242794462 242794548 -10462035 + MER20 DNA MER1_type 128 216 -3 336 230 23 0 chr2 242794553 242794640 -10461943 + MER20 DNA MER1_type 131 219 0 342 230 23 0 chr2 242794642 242794729 -10461854 + MER20 DNA MER1_type 131 219 0 * 370 228 22 0 chr2 242794729 242794819 -10461764 + MER20 DNA MER1_type 128 219 0 345 239 22 0 chr2 242794819 242794909 -10461674 + MER20 DNA MER1_type 128 219 0 360 211 35 35 chr2 242794923 242795037 -10461546 + MER20 DNA MER1_type 106 219 0 339 231 33 0 chr2 242795037 242795126 -10461457 + MER20 DNA MER1_type 128 219 0 333 231 33 0 chr2 242795126 242795215 -10461368 + MER20 DNA MER1_type 128 219 0 373 230 10 20 chr2 242795215 242795305 -10461278 + MER20 DNA MER1_type 131 219 0 280 253 33 0 chr2 242795305 242795394 -10461189 + MER20 DNA MER1_type 128 219 0 335 212 30 40 chr2 242795394 242795483 -10461100 + MER20 DNA MER1_type 131 218 -1 324 243 9 36 chr2 242795502 242795613 -10460970 + MER20 DNA MER1_type 112 219 0 * 325 239 22 0 chr2 242795613 242795703 -10460880 + MER20 DNA MER1_type 128 219 0 315 239 34 0 chr2 242795703 242795789 -10460794 + MER20 DNA MER1_type 128 216 -3 367 207 23 0 chr2 242795794 242795881 -10460702 + MER20 DNA MER1_type 131 219 0 333 231 33 0 chr2 242795881 242795970 -10460613 + MER20 DNA MER1_type 128 219 0 317 231 33 0 chr2 242795970 242796059 -10460524 + MER20 DNA MER1_type 128 219 0 331 231 33 0 chr2 242796059 242796148 -10460435 + MER20 DNA MER1_type 128 219 0 345 239 22 0 chr2 242796148 242796238 -10460345 + MER20 DNA MER1_type 128 219 0 313 220 33 0 chr2 242796238 242796327 -10460256 + MER20 DNA MER1_type 128 219 0 349 209 33 0 chr2 242796327 242796416 -10460167 + MER20 DNA MER1_type 128 219 0 349 220 33 0 chr2 242796416 242796505 -10460078 + MER20 DNA MER1_type 128 219 0 370 228 22 0 chr2 242796505 242796595 -10459988 + MER20 DNA MER1_type 128 219 0 346 239 22 0 chr2 242796595 242796685 -10459898 + MER20 DNA MER1_type 128 219 0 359 235 26 35 chr2 242796699 242796814 -10459769 + MER20 DNA MER1_type 106 219 0 329 220 33 0 chr2 242796814 242796903 -10459680 + MER20 DNA MER1_type 128 219 0 329 242 33 0 chr2 242796903 242796992 -10459591 + MER20 DNA MER1_type 128 219 0 362 228 22 0 chr2 242796992 242797082 -10459501 + MER20 DNA MER1_type 128 219 0 321 231 33 0 chr2 242797082 242797171 -10459412 + MER20 DNA MER1_type 128 219 0 319 221 18 71 chr2 242797171 242797260 -10459323 + MER20 DNA MER1_type 137 219 0 358 220 33 0 chr2 242797260 242797349 -10459234 + MER20 DNA MER1_type 128 219 0 378 228 22 0 chr2 242797349 242797439 -10459144 + MER20 DNA MER1_type 128 219 0 284 238 25 0 chr2 242797486 242797566 -10459017 + MER20 DNA MER1_type 137 218 -1 327 230 23 0 chr2 242797569 242797656 -10458927 + MER20 DNA MER1_type 131 219 0 * 339 239 22 0 chr2 242797656 242797746 -10458837 + MER20 DNA MER1_type 128 219 0 363 209 33 0 chr2 242797746 242797835 -10458748 + MER20 DNA MER1_type 128 219 0 337 239 22 0 chr2 242797835 242797925 -10458658 + MER20 DNA MER1_type 128 219 0 371 228 22 0 chr2 242797925 242798015 -10458568 + MER20 DNA MER1_type 128 219 0 337 239 22 0 chr2 242798015 242798105 -10458478 + MER20 DNA MER1_type 128 219 0 349 239 22 0 chr2 242798105 242798195 -10458388 + MER20 DNA MER1_type 128 219 0 361 228 22 0 chr2 242798232 242798324 -10458259 + MER20 DNA MER1_type 126 219 0 343 242 22 0 chr2 242798361 242798452 -10458131 + MER20 DNA MER1_type 126 218 -1 381 207 18 45 chr2 242798471 242798582 -10458001 + MER20 DNA MER1_type 112 219 0 352 243 9 36 chr2 242798600 242798711 -10457872 + MER20 DNA MER1_type 112 219 0 333 252 9 36 chr2 242798729 242798840 -10457743 + MER20 DNA MER1_type 112 219 0 324 232 9 45 chr2 242798858 242798970 -10457613 + MER20 DNA MER1_type 112 219 0 383 235 10 20 chr2 242798997 242799099 -10457484 + MER20 DNA MER1_type 119 219 0 400 216 9 36 chr2 242799117 242799228 -10457355 + MER20 DNA MER1_type 112 219 0 1447 222 47 103 chr2 242799363 242799850 -10456733 + MER21B LTR ERV1 12 471 -392 336 248 54 74 chr2 242850329 242850478 -10406105 + MER61B LTR ERV1 1 146 -279 * 1146 239 96 74 chr2 242850467 242851155 -10405428 + LTR28 LTR ERV1 107 959 -61 3491 209 22 8 chr2 242851279 242852175 -10404408 + L1 LINE L1 4414 5322 -824 1428 139 5 0 chr2 242852179 242852380 -10404203 + AluSq SINE Alu 3 204 -109 3356 206 18 56 chr2 242852483 242853580 -10403003 + L1 LINE L1 2202 3257 -2889 24 32 0 0 chr2 242853788 242853819 -10402764 + AT_rich Low_complexity Low_complexity 1 31 0 46 45 0 0 chr2 242854615 242854682 -10401901 + AT_rich Low_complexity Low_complexity 1 67 0 831 297 70 15 chr2 242855079 242855463 -10401120 + L1M2b LINE L1 227 1077 -6132 2074 224 61 4 chr2 242855696 242856254 -10400329 + L1M2b LINE L1 1737 2326 -4883 362 275 64 47 chr2 242856355 242856526 -10400057 + MLT2C1 LTR ERVL 224 397 0 234 295 12 18 chr2 242856527 242856693 -10399890 + (TA)n Simple_repeat Simple_repeat 1 165 0 341 274 67 6 chr2 242856747 242856911 -10399672 + Charlie7 DNA MER1_type 1739 1912 -700 359 221 55 80 chr2 242859152 242859351 -10397232 + LTR68 LTR ERV1 493 686 -54 189 147 0 0 chr2 242859590 242859624 -10396959 + (TG)n Simple_repeat Simple_repeat 1 34 0 379 282 11 116 chr2 242859624 242859901 -10396682 - MLT1K LTR MaLR -174 414 167 2033 125 14 0 chr2 242860321 242860609 -10395974 + AluSx SINE Alu 1 292 -20 22 0 0 0 chr2 242860609 242860631 -10395952 + AT_rich Low_complexity Low_complexity 1 22 0 671 218 0 0 chr2 242860790 242860932 -10395651 - MLT2B3 LTR ERVL -412 142 1 479 42 0 14 chr2 242861113 242861185 -10395398 - L1PA8 LINE L1 -1 6171 6101 26 50 0 0 chr2 242861322 242861362 -10395221 + AT_rich Low_complexity Low_complexity 1 40 0 198 366 75 8 chr2 242861998 242862132 -10394451 + MIR3 SINE MIR 30 172 -36 284 279 178 8 chr2 242862996 242863125 -10393458 - L2 LINE L2 -12 3301 3151 1816 170 6 16 chr2 242863140 242863451 -10393132 - AluJb SINE Alu -4 308 1 806 246 23 47 chr2 242863997 242864253 -10392330 + MLT1E1 LTR MaLR 405 654 0 302 254 18 45 chr2 242864253 242864363 -10392220 + L1ME3A LINE L1 6037 6143 -27 21 0 0 0 chr2 242865901 242865922 -10390661 + AT_rich Low_complexity Low_complexity 1 21 0 2022 163 0 0 chr2 242866064 242866365 -10390218 + AluJb SINE Alu 1 301 -11 390 218 222 35 chr2 242866381 242866642 -10389941 - L1MC5 LINE L1 -392 7569 7260 792 195 5 41 chr2 242866855 242867050 -10389533 - L1MC5 LINE L1 -728 7233 7046 605 195 9 19 chr2 242867060 242867226 -10389357 - L1MC5 LINE L1 -1059 6983 6738 2167 117 3 3 chr2 242867237 242867535 -10389048 - AluSx SINE Alu -14 298 1 2273 160 0 0 chr2 242867758 242868095 -10388488 + MER1B DNA MER1_type 1 337 0 192 77 0 0 chr2 242868482 242868508 -10388075 + (G)n Simple_repeat Simple_repeat 1 26 0 1194 308 104 60 chr2 242868528 242869464 -10387119 + L2 LINE L2 239 1215 -2099 285 323 8 23 chr2 242869507 242869640 -10386943 + Charlie8 DNA MER1_type 96 226 -2191 953 211 99 7 chr2 242869666 242869909 -10386674 - MIR SINE MIR -12 250 9 1103 332 133 3 chr2 242869990 242870805 -10385778 + L2 LINE L2 2395 3313 0 348 212 93 8 chr2 242871196 242871314 -10385269 + L1M4 LINE L1 3662 3789 -2357 2069 135 7 3 chr2 242871435 242871738 -10384845 - AluSx SINE Alu -8 304 1 417 74 12 25 chr2 242871810 242871891 -10384692 + (TA)n Simple_repeat Simple_repeat 1 80 0 23 0 0 0 chr2 242872213 242872236 -10384347 + AT_rich Low_complexity Low_complexity 1 23 0 2036 127 13 17 chr2 242872246 242872545 -10384038 + AluSx SINE Alu 1 298 -14 519 160 0 0 chr2 242872548 242872623 -10383960 + AluJ/F(R)AM SINE Alu 129 203 -109 2235 123 0 3 chr2 242872771 242873073 -10383510 - AluSg SINE Alu -9 301 1 720 181 21 13 chr2 242873088 242873268 -10383315 + L1M4 LINE L1 5297 5483 -691 264 176 0 0 chr2 242873242 242873293 -10383290 + L1MB5 LINE L1 6110 6160 -14 * 366 344 108 32 chr2 242873326 242873605 -10382978 + L1M4 LINE L1 4672 4971 -1175 2153 101 0 0 chr2 242873614 242873891 -10382692 + AluSc SINE Alu 1 277 -32 189 0 0 0 chr2 242873894 242873915 -10382668 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 227 163 23 0 chr2 242873969 242874012 -10382571 + Alu SINE Alu 37 80 -222 981 259 93 39 chr2 242874436 242874537 -10382046 + L2 LINE L2 2420 2514 -799 325 0 22 22 chr2 242874537 242874583 -10382000 + (CA)n Simple_repeat Simple_repeat 2 47 0 981 259 93 39 chr2 242874583 242875195 -10381388 + L2 LINE L2 2514 3215 -98 221 322 40 34 chr2 242875199 242875376 -10381207 + L2 LINE L2 2328 2505 -809 859 136 8 30 chr2 242875527 242875659 -10380924 + FLAM_C SINE Alu 1 129 -14 1986 124 13 13 chr2 242875819 242876118 -10380465 - AluJb SINE Alu -5 307 9 2192 92 10 3 chr2 242876484 242876779 -10379804 + AluSc SINE Alu 1 297 -12 627 102 10 10 chr2 242877072 242877170 -10379413 - AluSg/x SINE Alu -5 307 210 698 285 60 13 chr2 242878008 242878243 -10378340 - MIR SINE MIR -14 248 3 836 224 132 12 chr2 242878541 242878975 -10377608 - L1ME LINE L1 -584 5578 5076 886 55 31 0 chr2 242880101 242880228 -10376355 + (TTTC)n Simple_repeat Simple_repeat 2 132 0 2240 108 0 0 chr2 242880231 242880519 -10376064 - AluSx SINE Alu -24 288 1 476 302 116 5 chr2 242881301 242881490 -10375093 - L2 LINE L2 0 3313 3104 2525 68 0 13 chr2 242881490 242881801 -10374782 + AluY SINE Alu 1 307 -4 386 347 59 13 chr2 242882185 242882424 -10374159 + L1ME1 LINE L1 5912 6161 -5 200 200 0 0 chr2 242883093 242883128 -10373455 + (CA)n Simple_repeat Simple_repeat 2 36 0 705 225 72 52 chr2 242883470 242884025 -10372558 + L1MC4a LINE L1 6441 7025 -1017 4744 155 93 3 chr2 242885326 242886335 -10370248 + L1 LINE L1 4125 5224 -922 330 159 8 159 chr2 242886349 242886481 -10370102 + L1 LINE L1 5191 5302 -844 3357 125 11 6 chr2 242886482 242887010 -10369573 + L1PA16 LINE L1 5622 6152 -14 2326 98 3 13 chr2 242887265 242887581 -10369002 + AluSp SINE Alu 1 313 0 705 263 76 0 chr2 242888608 242888806 -10367777 + MIR SINE MIR 1 213 -49 529 241 67 114 chr2 242888814 242889057 -10367526 + L1MC4 LINE L1 7555 7769 -273 1959 212 34 55 chr2 242889057 242889623 -10366960 - MLT2B3 LTR ERVL 0 554 1 529 241 67 114 chr2 242889623 242889827 -10366756 + L1MC4 LINE L1 7769 7981 -61 * 2854 161 119 30 chr2 242889825 242890488 -10366095 + L1MD2 LINE L1 5631 6352 -7 2025 131 3 35 chr2 242890488 242890715 -10365868 + AluSx SINE Alu 2 218 -94 2588 26 3 23 chr2 242890715 242891025 -10365558 + AluY SINE Alu 1 304 -7 2025 131 3 35 chr2 242891025 242891111 -10365472 + AluSx SINE Alu 218 305 -7 2235 106 7 0 chr2 242891495 242891798 -10364785 - AluY SINE Alu -6 305 1 1191 115 42 5 chr2 242891798 242891990 -10364593 - MER1B DNA MER1_type -61 236 38 1040 181 15 5 chr2 242892013 242892212 -10364371 + MLT1C LTR MaLR 267 467 0 2225 118 0 0 chr2 242892427 242892723 -10363860 + AluSx SINE Alu 1 296 -16 341 329 144 12 chr2 242892850 242893169 -10363414 + L1ME LINE L1 3365 3725 -2421 1977 153 10 0 chr2 242893181 242893482 -10363101 + AluSx SINE Alu 1 304 -8 238 272 10 29 chr2 242893491 242893594 -10362989 + L1ME LINE L1 3744 3844 -2302 415 321 42 24 chr2 242893790 242894002 -10362581 + L1ME LINE L1 5133 5348 -798 2268 111 3 0 chr2 242894040 242894338 -10362245 + AluSx SINE Alu 1 299 -13 253 301 35 0 chr2 242894338 242894433 -10362150 + L1ME LINE L1 5471 5571 -591 14688 127 83 30 chr2 242894646 242896309 -10360274 + L1M1 LINE L1 820 2692 -4873 2500 64 0 0 chr2 242896309 242896606 -10359977 + AluY SINE Alu 2 298 -13 14688 127 83 30 chr2 242896606 242897710 -10358873 + L1M1 LINE L1 2692 3736 -3829 1605 226 52 39 chr2 242897837 242898354 -10358229 - L1ME LINE L1 -389 5777 5254 6071 237 87 44 chr2 242898370 242898527 -10358056 - L1ME LINE L1 -953 5193 5044 1086 153 75 4 chr2 242898527 242898755 -10357828 - L1MB1 LINE L1 -5 6163 5920 6071 237 87 44 chr2 242898755 242901340 -10355243 - L1ME LINE L1 -1102 5044 2333 316 311 73 52 chr2 242901345 242901593 -10354990 - L2 LINE L2 -1612 1702 1450 1771 158 10 43 chr2 242901714 242902017 -10354566 + AluJb SINE Alu 1 293 -19 225 169 215 0 chr2 242903211 242903276 -10353307 - L1ME3A LINE L1 -5 6165 6087 21 57 0 0 chr2 242904100 242904135 -10352448 + AT_rich Low_complexity Low_complexity 1 35 0 859 173 135 22 chr2 242904193 242904378 -10352205 - MER46A DNA MER2_type 0 236 31 608 243 84 111 chr2 242905157 242905536 -10351047 - MER115 DNA AcHobo -7 686 318 300 236 14 14 chr2 242905633 242905705 -10350878 - MER115 DNA AcHobo -560 133 62 267 148 164 0 chr2 242906470 242906531 -10350052 + MIR3 SINE MIR 124 194 -14 959 270 28 28 chr2 242909976 242910224 -10346359 + MIR SINE MIR 5 252 -10 383 368 8 16 chr2 242910335 242910460 -10346123 - L2 LINE L2 -34 3238 3115 29002 109 16 66 chr2 242910518 242917006 -10339577 - L1PA7 LINE L1 0 6154 9 281 336 73 9 chr2 242918741 242918851 -10337732 - MIR3 SINE MIR -79 129 13 380 343 110 31 chr2 242918943 242919197 -10337386 - L2 LINE L2 -29 3243 2970 311 316 184 33 chr2 242919665 242919877 -10336706 - MIR SINE MIR 0 262 19 243 270 27 0 chr2 242921864 242921938 -10334645 + MIR SINE MIR 187 262 0 872 293 33 27 chr2 242922150 242922481 -10334102 - MLT1I LTR MaLR -75 334 2 711 306 126 44 chr2 242923069 242923861 -10332722 - L2 LINE L2 -446 2868 2012 578 105 0 0 chr2 242923865 242923941 -10332642 - Alu SINE Alu -231 78 3 305 213 25 0 chr2 242923944 242924024 -10332559 - MER105 DNA DNA -117 87 6 1305 182 75 67 chr2 242924392 242924684 -10331899 - MLT1A1 LTR MaLR -1 364 67 2382 82 7 3 chr2 242924684 242924987 -10331596 - AluSx SINE Alu -8 304 1 1305 182 75 67 chr2 242924987 242925052 -10331531 - MLT1A1 LTR MaLR -298 67 4 232 242 350 0 chr2 242925320 242925451 -10331132 + MER5A DNA MER1_type 4 189 0 23 0 0 0 chr2 242925821 242925844 -10330739 + AT_rich Low_complexity Low_complexity 1 23 0 749 158 17 0 chr2 242925844 242925964 -10330619 - FLAM_C SINE Alu -11 122 1 2890 161 25 21 chr2 242926567 242927133 -10329450 - L1MB7 LINE L1 -19 6165 5598 2417 65 3 0 chr2 242927463 242927756 -10328827 + AluY SINE Alu 1 294 -17 393 243 68 24 chr2 242928105 242928311 -10328272 - L1ME LINE L1 -299 5822 5608 940 192 163 18 chr2 242928343 242928619 -10327964 + MSTD LTR MaLR 1 316 -80 186 311 68 15 chr2 242928699 242928831 -10327752 - L3 LINE CR1 -753 824 686 2131 86 23 36 chr2 242929284 242929588 -10326995 - AluSx SINE Alu -12 300 1 369 333 59 78 chr2 242929711 242930068 -10326515 - L2 LINE L2 0 3272 2923 181 294 0 0 chr2 242930269 242930303 -10326280 + L2 LINE L2 3253 3286 -27 2841 10 0 0 chr2 242930543 242930852 -10325731 + AluYa5 SINE Alu 1 309 -2 2198 117 3 3 chr2 242931037 242931336 -10325247 - AluSx SINE Alu -13 299 1 2501 213 84 47 chr2 242932396 242933162 -10323421 - MER21B LTR ERV1 -57 806 13 283 255 163 10 chr2 242933221 242933319 -10323264 - L2 LINE L2 -4 3309 3197 1807 282 63 29 chr2 242933658 242935181 -10321402 + L1ME3A LINE L1 3513 5162 -1008 2079 118 21 0 chr2 242935181 242935499 -10321084 + AluSx SINE Alu 1 312 0 1807 282 63 29 chr2 242935499 242936233 -10320350 + L1ME3A LINE L1 5162 5869 -301 984 238 0 0 chr2 242936348 242936562 -10320021 + MLT1E1 LTR MaLR 3 216 -438 345 181 108 12 chr2 242937088 242937171 -10319412 + LTR67 LTR ERVL 460 550 -7 22 35 0 0 chr2 242937379 242937408 -10319175 + AT_rich Low_complexity Low_complexity 1 29 0 271 286 25 25 chr2 242937528 242937647 -10318936 - LTR67 LTR ERVL -4 553 435 318 50 0 0 chr2 242937906 242937946 -10318637 + (CA)n Simple_repeat Simple_repeat 2 41 0 426 305 66 36 chr2 242938023 242938325 -10318258 + ERVL LTR ERVL 3724 4034 -1730 498 346 52 9 chr2 242938435 242938779 -10317804 + ERVL LTR ERVL 4154 4512 -1142 2513 58 0 0 chr2 242940250 242940545 -10316038 - AluY SINE Alu -16 295 1 256 250 87 25 chr2 242940618 242940821 -10315762 + HAL1b LINE L1 190 608 -740 40785 32 22 1 chr2 242941024 242947052 -10309531 + L1HS LINE L1 1 6155 0 270 143 0 0 chr2 242947476 242947525 -10309058 + (A)n Simple_repeat Simple_repeat 1 49 0 2168 105 11 0 chr2 242947902 242948187 -10308396 + AluSc SINE Alu 1 288 -21 682 142 8 15 chr2 242948187 242948321 -10308262 + G-rich Low_complexity Low_complexity 4 136 0 28 61 0 0 chr2 242948459 242948508 -10308075 + AT_rich Low_complexity Low_complexity 1 49 0 641 148 142 25 chr2 242948703 242948865 -10307718 + L1MC3 LINE L1 7457 7637 -148 352 167 64 0 chr2 242948884 242948976 -10307607 + L1MC3 LINE L1 6239 7781 -4 813 153 0 0 chr2 242948978 242949096 -10307487 + FLAM_C SINE Alu 1 118 -15 34 24 0 0 chr2 242949096 242949137 -10307446 + AT_rich Low_complexity Low_complexity 1 41 0 30 27 0 0 chr2 242949394 242949431 -10307152 + AT_rich Low_complexity Low_complexity 1 37 0 354 266 197 20 chr2 242949678 242949881 -10306702 + MLT1L LTR MaLR 368 606 -9 600 285 5 0 chr2 242950732 242950939 -10305644 + L1MD3 LINE L1 4146 4353 -1793 2044 206 75 26 chr2 242950952 242951773 -10304810 + L1MD3 LINE L1 5160 7995 0 677 253 74 22 chr2 242951769 242952081 -10304502 + L1ME3A LINE L1 5317 5644 -520 * 365 247 81 166 chr2 242952161 242952498 -10304085 + L1ME3A LINE L1 5772 6079 -83 237 262 16 0 chr2 242952615 242952676 -10303907 + L1ME4a LINE L1 5985 6046 -75 216 310 166 27 chr2 242955421 242955608 -10300975 + L3 LINE CR1 1364 1576 -1 180 350 70 20 chr2 242955739 242955839 -10300744 + L2 LINE L2 2358 2462 -852 389 328 49 32 chr2 242956232 242956516 -10300067 + L2 LINE L2 2412 2700 -614 236 301 65 54 chr2 242957207 242957300 -10299283 + L2 LINE L2 3148 3241 -31 27 0 0 0 chr2 242958041 242958068 -10298515 + AT_rich Low_complexity Low_complexity 1 27 0 406 270 22 52 chr2 242961322 242961473 -10295110 - MIR SINE MIR -67 141 15 875 170 14 0 chr2 242962660 242962801 -10293782 + FRAM SINE Alu 1 143 -33 1349 188 34 20 chr2 242962822 242963161 -10293422 + LTR8 LTR ERV1 12 355 -372 729 191 0 0 chr2 242963173 242963304 -10293279 + FLAM_C SINE Alu 1 131 -12 1360 182 46 29 chr2 242963310 242963338 -10293245 + LTR8 LTR ERV1 380 406 -285 277 21 0 62 chr2 242963338 242963386 -10293197 + (CACCC)n Simple_repeat Simple_repeat 3 47 0 1360 182 46 29 chr2 242963386 242963664 -10292919 + LTR8 LTR ERV1 406 691 0 201 311 77 81 chr2 242964223 242964445 -10292138 + L2 LINE L2 2613 2833 -481 27 49 0 0 chr2 242964589 242964630 -10291953 + AT_rich Low_complexity Low_complexity 1 41 0 2000 123 0 4 chr2 242964792 242965069 -10291514 - AluSx SINE Alu -7 305 30 576 278 67 12 chr2 242965431 242965651 -10290932 - MIR SINE MIR -9 253 27 320 195 65 57 chr2 242966031 242966078 -10290505 + LTR67 LTR ERVL 434 557 0 375 197 26 0 chr2 242966078 242966154 -10290429 + MLT1K LTR MaLR 511 588 0 21 57 0 0 chr2 242966470 242966505 -10290078 + AT_rich Low_complexity Low_complexity 1 35 0 409 290 111 25 chr2 242966552 242966714 -10289869 + MIR SINE MIR 29 204 -58 1210 234 103 13 chr2 242967274 242967662 -10288921 + MARNA DNA Mariner 12 434 -152 475 314 118 47 chr2 242967671 242968266 -10288317 + L2 LINE L2 1645 2281 -1033 463 132 22 11 chr2 242968268 242968359 -10288224 + CT-rich Low_complexity Low_complexity 4 95 0 1868 156 0 23 chr2 242968573 242968880 -10287703 - AluJo SINE Alu -12 300 1 188 273 36 0 chr2 242968911 242968966 -10287617 + L2 LINE L2 2992 3048 -224 3620 199 86 50 chr2 242969013 242970536 -10286047 - L1MD2 LINE L1 -3 6356 4802 653 227 35 6 chr2 242970534 242970706 -10285877 - L1MB7 LINE L1 -17 6167 5991 * 1908 110 0 11 chr2 242970777 242971041 -10285542 - AluSx SINE Alu -22 290 30 2067 156 135 4 chr2 242971193 242971842 -10284741 - L1M4 LINE L1 -482 5696 4971 1447 221 68 77 chr2 242971841 242972507 -10284076 - L1M4 LINE L1 -2291 3855 3196 * 866 151 0 0 chr2 242972507 242972633 -10283950 + FLAM_C SINE Alu 1 126 -17 1795 212 25 21 chr2 242972653 242972771 -10283812 - L1M4 LINE L1 -2936 3210 3094 2059 124 0 51 chr2 242972771 242973086 -10283497 - AluSx SINE Alu -13 299 1 1795 212 25 21 chr2 242973086 242973482 -10283101 - L1M4 LINE L1 -3052 3094 2694 1934 149 7 13 chr2 242973964 242974273 -10282310 - AluJo SINE Alu -5 307 1 4062 228 14 59 chr2 242974398 242975354 -10281229 + L1MD3 LINE L1 2 905 -5637 1737 194 92 6 chr2 242975354 242975690 -10280893 - MLT1A1 LTR MaLR 0 365 1 4062 228 14 59 chr2 242975690 242975822 -10280761 + L1MD3 LINE L1 905 1041 -5501 186 167 0 0 chr2 242975833 242975869 -10280714 + (TG)n Simple_repeat Simple_repeat 1 36 0 2424 223 45 17 chr2 242975876 242976593 -10279990 + L1MD3 LINE L1 2797 3533 -3111 485 147 0 13 chr2 242976613 242976688 -10279895 + AluJb SINE Alu 71 144 -168 1995 109 30 20 chr2 242976689 242976810 -10279773 + AluSx SINE Alu 3 121 -191 207 0 0 0 chr2 242976810 242976833 -10279750 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1995 109 30 20 chr2 242976833 242977014 -10279569 + AluSx SINE Alu 121 308 -4 34551 24 0 0 chr2 242977026 242981831 -10274752 + L1HS LINE L1 1352 6155 0 270 143 0 0 chr2 242982255 242982304 -10274279 + (A)n Simple_repeat Simple_repeat 1 49 0 2166 105 11 0 chr2 242982681 242982966 -10273617 + AluSc SINE Alu 1 288 -21 682 142 8 15 chr2 242982966 242983100 -10273483 + G-rich Low_complexity Low_complexity 4 136 0 28 61 0 0 chr2 242983238 242983287 -10273296 + AT_rich Low_complexity Low_complexity 1 49 0 718 148 142 25 chr2 242983482 242983644 -10272939 + L1MC3 LINE L1 7457 7637 -148 395 167 64 0 chr2 242983663 242983755 -10272828 + L1MC3 LINE L1 6239 7781 -4 858 153 0 0 chr2 242983757 242983875 -10272708 + FLAM_C SINE Alu 1 118 -15 34 24 0 0 chr2 242983875 242983916 -10272667 + AT_rich Low_complexity Low_complexity 1 41 0 30 27 0 0 chr2 242984173 242984210 -10272373 + AT_rich Low_complexity Low_complexity 1 37 0 439 266 197 20 chr2 242984457 242984660 -10271923 + MLT1L LTR MaLR 368 606 -9 690 277 5 9 chr2 242985505 242985718 -10270865 + L1MD3 LINE L1 4640 4851 -1793 2313 208 74 23 chr2 242985731 242986552 -10270031 + L1MD3 LINE L1 5658 8493 0 728 269 185 25 chr2 242986529 242987097 -10269486 + L1ME4a LINE L1 5791 6449 -211 * 265 262 16 0 chr2 242987394 242987455 -10269128 + L1ME4a LINE L1 6483 6544 -75 207 310 166 27 chr2 242990201 242990388 -10266195 + L3 LINE CR1 1364 1576 -1 382 328 49 32 chr2 242991012 242991296 -10265287 + L2 LINE L2 2412 2700 -614 227 301 65 54 chr2 242991987 242992080 -10264503 + L2 LINE L2 3148 3241 -31 27 0 0 0 chr2 242992821 242992848 -10263735 + AT_rich Low_complexity Low_complexity 1 27 0 1877 138 17 24 chr2 242996187 242996483 -10260100 - AluSx SINE Alu -16 296 3 4412 222 72 32 chr2 242996733 242997030 -10259553 - L1MDb LINE L1 -4992 1417 1133 2277 103 0 10 chr2 242997030 242997330 -10259253 - AluSx SINE Alu -15 297 1 4412 222 72 32 chr2 242997330 242998627 -10257956 - L1MDb LINE L1 -5276 1133 45 900 194 23 42 chr2 242998627 242998843 -10257740 - Cheshire DNA MER1_type -635 1785 1574 458 277 92 0 chr2 242998895 242999036 -10257547 - Charlie8 DNA MER1_type -2144 273 120 225 0 0 0 chr2 242999064 242999089 -10257494 + (T)n Simple_repeat Simple_repeat 1 25 0 2130 103 31 7 chr2 242999451 242999742 -10256841 + AluSg SINE Alu 1 298 -12 21 0 0 0 chr2 242999887 242999908 -10256675 + AT_rich Low_complexity Low_complexity 1 21 0 31 0 0 0 chr2 243000877 243000908 -10255675 + AT_rich Low_complexity Low_complexity 1 31 0 1888 143 34 10 chr2 243002288 243002581 -10254002 + AluJb SINE Alu 11 310 -2 732 312 175 37 chr2 243002642 243002781 -10253802 - L2 LINE L2 0 3313 3195 1806 168 0 17 chr2 243002781 243003078 -10253505 + AluJb SINE Alu 5 296 -16 732 312 175 37 chr2 243003078 243003860 -10252723 - L2 LINE L2 -118 3195 2246 251 364 7 45 chr2 243004037 243004191 -10252392 - L2 LINE L2 -250 3022 2875 1224 251 96 42 chr2 243004266 243004716 -10251867 + MLT1J LTR MaLR 1 474 -37 210 262 82 57 chr2 243005403 243005525 -10251058 - MIR SINE MIR -30 232 108 288 308 103 56 chr2 243005715 243006128 -10250455 - L2 LINE L2 -91 3181 2703 617 263 56 51 chr2 243006206 243006664 -10249919 - L1MEd LINE L1 -4896 1235 822 280 333 12 0 chr2 243007006 243007087 -10249496 - L1MEd LINE L1 -5458 661 580 192 238 0 0 chr2 243007662 243007704 -10248879 - MIR SINE MIR -72 190 149 259 294 55 34 chr2 243007739 243007885 -10248698 - MIR SINE MIR -67 141 6 284 392 32 8 chr2 243008063 243008188 -10248395 + MIR SINE MIR 23 150 -112 183 42 0 0 chr2 243008259 243008283 -10248300 + (TTG)n Simple_repeat Simple_repeat 3 26 0 2380 95 0 3 chr2 243008292 243008598 -10247985 - AluSx SINE Alu -7 305 1 385 217 139 17 chr2 243008698 243008813 -10247770 + MIR SINE MIR 124 252 -10 264 380 47 0 chr2 243008946 243009096 -10247487 - L2 LINE L2 -556 2758 2602 593 277 6 0 chr2 243009252 243009411 -10247172 + MER5A DNA MER1_type 28 187 -2 488 308 146 56 chr2 243009496 243010359 -10246224 - L2 LINE L2 -1018 2296 1356 533 252 17 80 chr2 243010498 243010759 -10245824 - MIR SINE MIR -15 247 3 2101 207 150 11 chr2 243012671 243013192 -10243391 + MLT1E LTR MaLR 1 593 0 225 83 0 0 chr2 243014172 243014208 -10242375 + (TTG)n Simple_repeat Simple_repeat 2 37 0 1744 159 0 25 chr2 243014810 243015145 -10241438 - AluSx SINE Alu 0 333 6 2013 126 105 9 chr2 243015150 243015492 -10241091 - THE1C LTR MaLR 0 375 1 3076 109 39 2 chr2 243015818 243016231 -10240352 + MSTC LTR MaLR 1 428 0 244 396 44 25 chr2 243016441 243016802 -10239781 + L2 LINE L2 2241 2608 -706 4089 99 19 19 chr2 243016822 243017409 -10239174 - LTR8 LTR ERV1 -104 587 1 2828 162 13 6 chr2 243017409 243017879 -10238704 - HUERS-P1 LTR ERV1 0 6263 5791 251 30 0 30 chr2 243018732 243018765 -10237818 - L1P4 LINE L1 -286 5882 5851 203 284 40 27 chr2 243018765 243018839 -10237744 - MIR SINE MIR -79 129 55 310 282 32 24 chr2 243018976 243019100 -10237483 - MLT1K LTR MaLR -16 572 448 599 323 73 52 chr2 243020059 243020499 -10236084 - L2 LINE L2 -4 3268 2820 2039 121 16 38 chr2 243020691 243021005 -10235578 + AluSx SINE Alu 1 307 -5 420 71 0 0 chr2 243021133 243021189 -10235394 + (GGGA)n Simple_repeat Simple_repeat 4 59 0 264 360 27 9 chr2 243025784 243025895 -10230688 + L2 LINE L2 3160 3272 0 1876 138 21 3 chr2 243026136 243026425 -10230158 + AluSx SINE Alu 1 294 -18 2103 120 7 3 chr2 243026437 243026738 -10229845 + AluSp SINE Alu 4 305 -8 295 210 74 12 chr2 243027099 243027180 -10229403 + L2 LINE L2 3186 3271 -1 561 256 70 6 chr2 243027239 243027395 -10229188 - MER96 DNA MER1_type? 0 175 10 223 258 0 15 chr2 243027766 243027832 -10228751 + GA-rich Low_complexity Low_complexity 1 65 0 389 235 63 50 chr2 243027843 243028070 -10228513 + L1M4 LINE L1 97 541 -6314 1423 228 93 96 chr2 243028200 243029185 -10227398 + L1M4 LINE L1 798 1779 -5076 599 249 75 60 chr2 243029213 243029547 -10227036 + LTR52 LTR ERVL 1 339 -82 666 222 174 39 chr2 243029622 243029759 -10226824 + L1M4 LINE L1 4100 4217 -2740 1472 201 0 67 chr2 243029759 243030072 -10226511 + AluJb SINE Alu 1 292 -20 666 222 174 39 chr2 243030072 243030295 -10226288 + L1M4 LINE L1 4217 4509 -2448 232 244 38 38 chr2 243030318 243030449 -10226134 - L1M4 LINE L1 -2688 3458 3328 1283 140 0 15 chr2 243030482 243030682 -10225901 + AluJb SINE Alu 35 231 -81 190 331 171 42 chr2 243030988 243031873 -10224710 + L2 LINE L2 1714 2732 -582 2393 101 3 0 chr2 243031873 243032181 -10224402 - AluSx SINE Alu -3 309 1 190 331 171 42 chr2 243032181 243032249 -10224334 + L2 LINE L2 2732 2790 -524 1138 284 55 122 chr2 243032370 243033274 -10223309 + L1ME LINE L1 60 1023 -5057 1910 176 0 3 chr2 243033274 243033580 -10223003 + AluSx SINE Alu 1 305 -7 1138 284 55 122 chr2 243033580 243033787 -10222796 + L1ME LINE L1 1023 1242 -4838 1979 142 0 3 chr2 243033787 243034082 -10222501 + AluSx SINE Alu 6 299 -13 1138 284 55 122 chr2 243034082 243034603 -10221980 + L1ME LINE L1 1242 1596 -4484 1047 275 32 6 chr2 243034662 243034978 -10221605 + HAL1 LINE L1 1553 1876 -631 951 241 19 39 chr2 243035250 243035611 -10220972 + L1MC4a LINE L1 5903 6256 -1552 284 129 65 0 chr2 243035611 243035673 -10220910 + L1 LINE L1 4466 4531 -1615 721 204 99 6 chr2 243035996 243036168 -10220415 - MER3 DNA MER1_type -12 197 10 326 326 0 0 chr2 243036430 243036519 -10220064 + MIR3 SINE MIR 72 160 -48 16411 138 28 39 chr2 243036786 243038218 -10218365 - L1PA11 LINE L1 -1 6173 4727 2190 112 23 0 chr2 243038218 243038523 -10218060 - AluSx SINE Alu 0 312 1 16411 138 28 39 chr2 243038523 243039977 -10216606 - L1PA11 LINE L1 -1447 4727 3351 2142 109 3 14 chr2 243039977 243040271 -10216312 - AluSx SINE Alu -21 291 1 16411 138 28 39 chr2 243040271 243041336 -10215247 - L1PA11 LINE L1 -2823 3351 2276 2788 118 65 53 chr2 243042370 243042570 -10214013 + L1MB4 LINE L1 5588 5784 -396 1914 138 3 35 chr2 243042570 243042888 -10213695 + AluJb SINE Alu 1 308 -4 2788 118 65 53 chr2 243042888 243043273 -10213310 + L1MB4 LINE L1 5784 6180 0 236 279 27 45 chr2 243043466 243043577 -10213006 + L2 LINE L2 2225 2333 -981 514 288 140 28 chr2 243044019 243044491 -10212092 + L1M4 LINE L1 3680 4204 -1942 887 303 58 35 chr2 243045131 243045822 -10210761 - L1MC4 LINE L1 -140 7902 7196 232 254 34 17 chr2 243045966 243046025 -10210558 + MER5B DNA MER1_type 30 89 -89 297 184 41 102 chr2 243046136 243046234 -10210349 + MIR SINE MIR 167 258 -4 2027 96 53 4 chr2 243046453 243046734 -10209849 - AluSx SINE Alu -17 295 1 234 0 0 0 chr2 243046857 243046883 -10209700 + (CA)n Simple_repeat Simple_repeat 2 27 0 536 262 90 30 chr2 243046885 243047351 -10209232 + L1M4 LINE L1 2686 3201 -2945 1799 126 45 42 chr2 243047351 243047661 -10208922 + AluSx SINE Alu 1 311 -1 536 262 90 30 chr2 243047661 243047827 -10208756 + L1M4 LINE L1 3201 3356 -2790 3723 148 23 20 chr2 243048034 243048493 -10208090 + L1MA8 LINE L1 4540 4996 -1295 2209 111 7 3 chr2 243048493 243048800 -10207783 + AluSq SINE Alu 1 308 -5 3723 148 23 20 chr2 243048800 243049611 -10206972 + L1MA8 LINE L1 4996 5809 -482 201 39 0 0 chr2 243049614 243049640 -10206943 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 807 163 0 22 chr2 243049647 243049782 -10206801 + FLAM_C SINE Alu 2 133 0 460 146 0 21 chr2 243049805 243049901 -10206682 + (GGAAA)n Simple_repeat Simple_repeat 4 97 0 1582 133 17 23 chr2 243049901 243050202 -10206381 + L1MA8 LINE L1 5814 6112 -179 1024 194 15 0 chr2 243050313 243050514 -10206069 - MER2 DNA MER2_type -136 209 6 1118 103 5 11 chr2 243050517 243050702 -10205881 + L1MA8 LINE L1 6107 6290 -1 4112 208 158 36 chr2 243050728 243051286 -10205297 + L1MC4 LINE L1 6284 6773 -1269 1072 186 67 5 chr2 243051286 243051496 -10205087 + MER58A DNA MER1_type 2 224 0 4112 208 158 36 chr2 243051496 243052040 -10204543 + L1MC4 LINE L1 6773 7249 -793 1466 218 119 3 chr2 243052040 243052393 -10204190 + MSTD LTR MaLR 3 396 0 4112 208 158 36 chr2 243052393 243052854 -10203729 + L1MC4 LINE L1 7249 8039 -3 495 371 88 29 chr2 243053361 243053703 -10202880 - L2 LINE L2 -15 3257 2896 317 263 187 32 chr2 243053734 243053985 -10202598 + L1MC5 LINE L1 7637 7926 -35 469 270 72 7 chr2 243054320 243054472 -10202111 + L2 LINE L2 1857 2018 -1296 907 296 112 30 chr2 243054662 243055234 -10201349 + L1MEd LINE L1 416 1034 -5496 385 254 112 43 chr2 243055283 243055422 -10201161 + L1MEd LINE L1 1115 1278 -5252 1640 176 86 0 chr2 243055422 243055700 -10200883 + AluJb SINE Alu 5 306 -6 385 254 112 43 chr2 243055700 243055792 -10200791 + L1MEd LINE L1 1278 1362 -5168 518 219 186 6 chr2 243055837 243056020 -10200563 + L1MEd LINE L1 2101 2316 -4224 2025 204 42 35 chr2 243056024 243056617 -10199966 + L1M4 LINE L1 4546 5142 -1004 640 293 80 99 chr2 243056975 243056994 -10199589 - L2 LINE L2 -832 2482 2464 1967 109 62 0 chr2 243056994 243057270 -10199313 + AluSx SINE Alu 1 293 -19 640 293 80 99 chr2 243057270 243057988 -10198595 - L2 LINE L2 -850 2464 1759 458 278 37 0 chr2 243058556 243058664 -10197919 + L2 LINE L2 3156 3267 -5 1840 175 10 0 chr2 243058938 243059230 -10197353 + AluJo SINE Alu 1 295 -17 1415 131 0 5 chr2 243059314 243059520 -10197063 + AluJb SINE Alu 14 218 -94 1764 155 13 32 chr2 243060644 243060953 -10195630 - AluJb SINE Alu -9 303 1 335 278 95 8 chr2 243060992 243061118 -10195465 - L1MC5 LINE L1 -26 7935 7799 387 41 0 0 chr2 243061119 243061168 -10195415 + (CA)n Simple_repeat Simple_repeat 2 50 0 12383 168 44 11 chr2 243062314 243062524 -10194059 + L1MEd LINE L1 2736 2937 -3603 2117 141 0 3 chr2 243062524 243062837 -10193746 - AluSx SINE Alu 0 312 1 12383 168 44 11 chr2 243062837 243065036 -10191547 + L1MEd LINE L1 2937 5246 -1294 204 67 0 0 chr2 243065036 243065066 -10191517 + (CATA)n Simple_repeat Simple_repeat 2 31 0 12383 168 44 11 chr2 243065066 243065318 -10191265 + L1MEd LINE L1 5246 5488 -1052 4643 107 16 3 chr2 243065324 243066052 -10190531 + L1MA3 LINE L1 5356 6093 -212 1559 163 14 24 chr2 243067038 243067327 -10189256 + AluJo SINE Alu 1 286 -26 2290 55 3 52 chr2 243068695 243069005 -10187578 - AluY SINE Alu -16 295 1 1242 48 0 7 chr2 243069005 243069151 -10187432 - AluY SINE Alu -166 145 1 2193 78 0 20 chr2 243070289 243070582 -10186001 + AluY SINE Alu 1 287 -24 237 164 82 0 chr2 243070582 243070655 -10185928 - L1MC4 LINE L1 -1350 6692 6614 21 0 0 0 chr2 243070667 243070688 -10185895 + AT_rich Low_complexity Low_complexity 1 21 0 247 256 0 0 chr2 243070873 243070963 -10185620 - L1MC4 LINE L1 -1339 6703 6614 390 287 0 0 chr2 243070963 243071106 -10185477 + (TA)n Simple_repeat Simple_repeat 1 143 0 1421 191 59 22 chr2 243071173 243071474 -10185109 + AluJo SINE Alu 1 311 0 183 220 60 20 chr2 243071800 243071850 -10184733 - L2 LINE L2 -1 3312 3261 536 252 212 53 chr2 243071890 243072211 -10184372 - L2 LINE L2 0 3313 2942 1111 129 49 58 chr2 243072759 243072983 -10183600 + MER46A DNA MER2_type 1 222 -14 2328 117 0 0 chr2 243073475 243073782 -10182801 + AluSx SINE Alu 1 307 -5 2110 90 23 27 chr2 243075152 243075452 -10181131 + AluSc SINE Alu 1 299 -10 399 237 10 17 chr2 243075544 243075661 -10180922 + MIR SINE MIR 50 163 -61 289 291 56 50 chr2 243076267 243076446 -10180137 + L2 LINE L2 2952 3131 -182 376 260 133 29 chr2 243076741 243076914 -10179669 + L3 LINE CR1 1256 1446 -131 1008 228 165 49 chr2 243077038 243077565 -10179018 + L1MC4a LINE L1 5836 6423 -1385 1740 257 107 117 chr2 243077594 243077696 -10178887 + L1MC4 LINE L1 6499 6601 -1441 530 127 13 0 chr2 243077696 243077775 -10178808 - MER116 DNA Mariner 0 80 1 1740 257 107 117 chr2 243077775 243078246 -10178337 + L1MC4 LINE L1 6601 7075 -967 2258 85 34 0 chr2 243078246 243078541 -10178042 - AluSx SINE Alu -7 305 1 1740 257 107 117 chr2 243078541 243079438 -10177145 + L1MC4 LINE L1 7075 8042 0 2421 81 0 0 chr2 243079589 243079887 -10176696 + AluSc SINE Alu 6 303 -6 213 39 0 0 chr2 243082675 243082701 -10173882 + (TA)n Simple_repeat Simple_repeat 1 26 0 757 189 0 0 chr2 243082713 243082835 -10173748 - AluSg/x SINE Alu -7 303 182 1227 144 6 0 chr2 243082882 243083063 -10173520 - AluJb SINE Alu -129 183 2 355 155 211 0 chr2 243083669 243083740 -10172843 - MER103 DNA DNA -74 92 7 937 214 108 18 chr2 243083801 243084111 -10172472 - MER58B DNA MER1_type 0 341 1 214 180 197 0 chr2 243084848 243084909 -10171674 - L2 LINE L2 0 3272 3200 202 106 43 21 chr2 243085720 243085767 -10170816 + CT-rich Low_complexity Low_complexity 1 48 0 1992 119 0 0 chr2 243085773 243086041 -10170542 - AluSx SINE Alu -12 300 33 640 248 0 0 chr2 243086044 243086204 -10170379 - L1MD2 LINE L1 -278 5902 5743 1244 223 0 0 chr2 243086208 243086441 -10170142 + AluJo SINE Alu 1 233 -79 249 252 70 35 chr2 243086462 243086605 -10169978 + MER104 DNA Tc2 28 175 -5 498 109 0 0 chr2 243086738 243086802 -10169781 - AluJ/FRAM SINE Alu -31 281 218 255 152 0 0 chr2 243088571 243088617 -10167966 + C-rich Low_complexity Low_complexity 3 48 0 1828 165 0 4 chr2 243088628 243088907 -10167676 - AluJb SINE Alu -33 279 2 25 31 0 0 chr2 243089300 243089332 -10167251 + AT_rich Low_complexity Low_complexity 1 32 0 687 193 73 60 chr2 243089335 243089485 -10167098 - FRAM SINE Alu -24 152 1 337 320 44 15 chr2 243089684 243089890 -10166693 - L1MEc LINE L1 -6138 258 47 320 199 192 62 chr2 243090552 243090698 -10165885 + L1ME4a LINE L1 5955 6119 -2 480 265 88 0 chr2 243091244 243091380 -10165203 - MER117 DNA MER1_type -45 152 5 574 302 0 0 chr2 243091525 243091664 -10164919 + MIR SINE MIR 2 140 -122 6871 25 0 23 chr2 243091676 243091787 -10164796 + L1PA2 LINE L1 5380 5492 -663 2007 123 4 0 chr2 243091787 243092101 -10164482 + AluSc SINE Alu 1 315 0 6871 25 0 23 chr2 243092101 243092775 -10163808 + L1PA2 LINE L1 5492 6148 -7 252 77 0 0 chr2 243092784 243092823 -10163760 + (TTAA)n Simple_repeat Simple_repeat 2 40 0 1099 159 0 6 chr2 243092824 243093000 -10163583 + AluSg/x SINE Alu 129 303 -9 7514 200 55 39 chr2 243093004 243093394 -10163189 + L1MB7 LINE L1 3037 3419 -2765 2211 126 0 3 chr2 243093394 243093696 -10162887 + AluSq SINE Alu 1 301 -12 7514 200 55 39 chr2 243093696 243093849 -10162734 + L1MB7 LINE L1 3419 3568 -2616 943 148 18 41 chr2 243093849 243094018 -10162565 + L1PA15 LINE L1 6000 6164 -1 7514 200 55 39 chr2 243094018 243094457 -10162126 + L1MB7 LINE L1 3568 3998 -2186 1671 168 48 0 chr2 243094457 243094748 -10161835 + AluJo SINE Alu 1 305 -7 7514 200 55 39 chr2 243094748 243094975 -10161608 + L1MB7 LINE L1 3998 4220 -1964 2355 105 0 0 chr2 243094975 243095281 -10161302 - AluSx SINE Alu -6 306 1 7514 200 55 39 chr2 243095281 243096053 -10160530 + L1MB7 LINE L1 4220 4978 -1206 1846 138 34 7 chr2 243096053 243096351 -10160232 + AluSq SINE Alu 1 306 -7 7514 200 55 39 chr2 243096351 243097434 -10159149 + L1MB7 LINE L1 4978 6166 -18 183 320 40 13 chr2 243098455 243098530 -10158053 - MIR SINE MIR -90 118 42 213 336 204 9 chr2 243100111 243100224 -10156359 + L2 LINE L2 3102 3236 -36 204 189 14 54 chr2 243100224 243100298 -10156285 + (TA)n Simple_repeat Simple_repeat 2 72 0 371 246 164 29 chr2 243100504 243100675 -10155908 + L2 LINE L2 3120 3313 0 1044 252 100 45 chr2 243100808 243101257 -10155326 + Charlie7 DNA MER1_type 82 555 -2057 * 2062 225 92 35 chr2 243101237 243101514 -10155069 + Charlie7 DNA MER1_type 1671 1931 -681 2327 92 7 0 chr2 243101514 243101817 -10154766 - AluSx SINE Alu -7 305 1 2062 225 92 35 chr2 243101817 243102358 -10154225 + Charlie7 DNA MER1_type 1931 2535 -77 1892 143 35 0 chr2 243102559 243102846 -10153737 - AluSx SINE Alu -15 297 1 2088 94 35 3 chr2 243102854 243103142 -10153441 - AluSc SINE Alu -12 297 1 894 200 122 0 chr2 243103307 243103466 -10153117 - AluJo SINE Alu -11 301 116 414 0 0 0 chr2 243103466 243103512 -10153071 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 894 200 122 0 chr2 243103512 243103532 -10153051 - AluJo SINE Alu -196 116 100 1826 159 3 14 chr2 243103757 243104047 -10152536 + AluJo SINE Alu 1 287 -25 498 258 49 125 chr2 243104143 243104512 -10152071 - L1ME4a LINE L1 -110 6011 5671 261 275 99 11 chr2 243104664 243104755 -10151828 - MIR3 SINE MIR -29 179 81 1774 188 43 6 chr2 243105492 243105816 -10150767 - MER58B DNA MER1_type 0 341 6 337 235 39 0 chr2 243106567 243106669 -10149914 - L1ME4a LINE L1 -2 6119 6014 2735 213 55 105 chr2 243107414 243107514 -10149069 + L1M4 LINE L1 2814 2917 -3229 2184 113 7 0 chr2 243107514 243107805 -10148778 + AluSc SINE Alu 1 293 -16 1986 165 0 0 chr2 243107814 243108111 -10148472 + AluSx SINE Alu 1 297 -15 2735 213 55 105 chr2 243108111 243108369 -10148214 + L1M4 LINE L1 2925 3194 -2952 2156 93 0 4 chr2 243108369 243108676 -10147907 + AluSc SINE Alu 1 306 0 2735 213 55 105 chr2 243108676 243108724 -10147859 + L1M4 LINE L1 3194 3243 -2903 1687 139 79 4 chr2 243108724 243108991 -10147592 - AluJb SINE Alu -25 287 1 2735 213 55 105 chr2 243108991 243109779 -10146804 + L1M4 LINE L1 3243 3961 -2185 234 0 0 0 chr2 243109904 243109930 -10146653 + (T)n Simple_repeat Simple_repeat 1 26 0 591 283 29 53 chr2 243110547 243110791 -10145792 - L3 LINE CR1 -139 1438 1201 651 144 36 0 chr2 243111212 243111323 -10145260 + L1MB7 LINE L1 5998 6112 -72 346 276 123 0 chr2 243112661 243112864 -10143719 + L2 LINE L2 2920 3147 -166 219 303 63 46 chr2 243112871 243113046 -10143537 - L2 LINE L2 -1592 1722 1545 354 45 0 0 chr2 243113064 243113108 -10143475 + (TCCCC)n Simple_repeat Simple_repeat 4 47 0 2169 93 0 0 chr2 243113112 243113390 -10143193 - AluSg SINE Alu -32 278 1 3856 167 46 100 chr2 243113563 243114499 -10142084 - MER21A LTR ERV1 -26 905 21 689 117 0 11 chr2 243114716 243114810 -10141773 + AluJ/FLAM SINE Alu 2 94 -218 1431 227 51 0 chr2 243116240 243116362 -10140221 + AluJb SINE Alu 2 116 -186 378 0 0 0 chr2 243116362 243116404 -10140179 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 1431 227 51 0 chr2 243116404 243116554 -10140029 + AluJb SINE Alu 116 288 -14 197 65 32 0 chr2 243116577 243116608 -10139975 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 2148 116 3 3 chr2 243116668 243116971 -10139612 + AluSg SINE Alu 1 303 -7 2262 102 7 3 chr2 243117062 243117365 -10139218 + AluSx SINE Alu 1 304 -8 2281 101 10 0 chr2 243117765 243118063 -10138520 + AluSq SINE Alu 1 301 -12 2272 116 0 0 chr2 243118184 243118485 -10138098 - AluSx SINE Alu -11 301 1 2127 114 14 0 chr2 243118720 243119009 -10137574 - AluSx SINE Alu -19 293 1 576 290 31 10 chr2 243119509 243119702 -10136881 + MIR3 SINE MIR 9 205 -3 460 221 124 28 chr2 243119876 243120021 -10136562 + MIR SINE MIR 104 262 0 1769 150 4 15 chr2 243120053 243120327 -10136256 + AluJb SINE Alu 5 275 -37 2584 252 50 24 chr2 243120409 243120803 -10135780 + L1ME3A LINE L1 4810 5192 -978 1994 162 3 0 chr2 243120803 243121106 -10135477 + AluSx SINE Alu 5 308 -4 2584 252 50 24 chr2 243121106 243121977 -10134606 + L1ME3A LINE L1 5192 6165 -5 2227 162 42 14 chr2 243122004 243122437 -10134146 + L1MB8 LINE L1 5725 6169 -9 822 250 23 0 chr2 243122541 243122717 -10133866 + MIR SINE MIR 7 186 -76 1944 141 9 31 chr2 243122932 243123251 -10133332 + AluJo SINE Alu 1 312 0 376 263 144 8 chr2 243123595 243123713 -10132870 + MIR SINE MIR 87 220 -42 2211 101 7 0 chr2 243124210 243124508 -10132075 - AluSp SINE Alu -13 300 1 283 304 51 25 chr2 243125426 243125584 -10130999 - L1MC5 LINE L1 -30 7931 7770 812 259 160 35 chr2 243126971 243127506 -10129077 + L2 LINE L2 2717 3311 -2 266 242 44 55 chr2 243127537 243127628 -10128955 + L3 LINE CR1 1176 1265 -312 398 388 8 39 chr2 243127695 243127950 -10128633 + L3 LINE CR1 1282 1528 -49 242 345 21 21 chr2 243128120 243128262 -10128321 - L2 LINE L2 -161 3111 2970 237 283 109 11 chr2 243128303 243128395 -10128188 + MER20B DNA MER1_type 73 173 -610 646 336 113 39 chr2 243128417 243129357 -10127226 - L2 LINE L2 -429 2885 1877 1866 186 12 24 chr2 243129404 243129742 -10126841 - MLT1A1 LTR MaLR 0 365 32 319 318 205 12 chr2 243130356 243130566 -10126017 + MIR SINE MIR 2 252 -10 1978 94 7 7 chr2 243130581 243130873 -10125710 - AluSx SINE Alu 0 313 22 346 330 91 34 chr2 243131090 243131266 -10125317 + L3 LINE CR1 1363 1548 -29 25 0 0 0 chr2 243131463 243131488 -10125095 + AT_rich Low_complexity Low_complexity 1 25 0 482 262 160 22 chr2 243132647 243132872 -10123711 - MLT1K LTR MaLR -64 524 269 2058 134 7 0 chr2 243132987 243133292 -10123291 - AluSx SINE Alu -5 307 1 195 186 0 0 chr2 243133368 243133411 -10123172 + (TATG)n Simple_repeat Simple_repeat 2 44 0 716 213 41 41 chr2 243133668 243133865 -10122718 - L2 LINE L2 0 3313 3117 454 207 181 0 chr2 243135120 243135236 -10121347 + MER58A DNA MER1_type 1 137 0 281 288 75 34 chr2 243135371 243135517 -10121066 + MIR3 SINE MIR 35 186 -22 269 300 18 64 chr2 243135556 243135666 -10120917 - L2 LINE L2 0 3272 3168 255 347 18 36 chr2 243140633 243140800 -10115783 - L2 LINE L2 -887 2427 2264 248 267 44 33 chr2 243140935 243141025 -10115558 - L2 LINE L2 -1890 1424 1334 26 50 0 0 chr2 243141868 243141908 -10114675 + AT_rich Low_complexity Low_complexity 1 40 0 322 389 41 14 chr2 243142439 243142660 -10113923 - L2 LINE L2 -173 3099 2873 215 397 52 15 chr2 243142784 243142920 -10113663 - MIR3 SINE MIR -64 144 4 970 225 51 4 chr2 243143124 243143360 -10113223 - L1MD3 LINE L1 -1 7994 7748 594 200 117 14 chr2 243143646 243143791 -10112792 - MLT1A2 LTR MaLR 0 374 215 297 305 45 19 chr2 243146293 243146447 -10110136 + L1ME4a LINE L1 5735 5892 -229 4743 230 98 80 chr2 243146463 243148224 -10108359 + HAL1 LINE L1 4 1796 -711 284 143 0 0 chr2 243148236 243148278 -10108305 - MER58 DNA MER1_type -3 2417 2376 2165 119 0 3 chr2 243148333 243148643 -10107940 + AluSq SINE Alu 2 310 -3 727 186 180 0 chr2 243148653 243148825 -10107758 - Charlie1 DNA MER1_type -307 2454 2252 1632 147 4 0 chr2 243148825 243149076 -10107507 + AluJb SINE Alu 1 252 -60 357 155 238 24 chr2 243149076 243149160 -10107423 + FLAM_C SINE Alu 32 133 0 1171 225 146 0 chr2 243149194 243149651 -10106932 - Charlie1 DNA MER1_type -916 1845 5 845 218 184 51 chr2 243149657 243150129 -10106454 + HAL1 LINE L1 1969 2503 -4 454 284 96 16 chr2 243150201 243150451 -10106132 - L1MC5 LINE L1 -181 7780 7511 332 266 46 9 chr2 243150598 243150707 -10105876 + L1ME4a LINE L1 5965 6077 -44 888 277 74 34 chr2 243152020 243152370 -10104213 + L2 LINE L2 2430 2793 -521 279 108 30 0 chr2 243152940 243152990 -10103593 + FRAM/FAM SINE Alu 33 67 -99 201 74 0 0 chr2 243153012 243153039 -10103544 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 1778 100 0 0 chr2 243153042 243153273 -10103310 + AluSq SINE Alu 1 231 -82 278 267 158 8 chr2 243154124 243154244 -10102339 + MIR SINE MIR 48 185 -77 2202 81 0 50 chr2 243154509 243154832 -10101751 + AluSg SINE Alu 1 307 -3 1643 174 0 40 chr2 243155817 243156138 -10100445 - AluSx SINE Alu -4 308 1 1044 227 41 0 chr2 243157990 243158210 -10098373 + MIR SINE MIR 14 242 -20 326 256 113 8 chr2 243158534 243158667 -10097916 - L1ME4a LINE L1 -3 6118 5972 1069 198 53 10 chr2 243158667 243158874 -10097709 + MER20 DNA MER1_type 1 216 -3 345 229 55 64 chr2 243159222 243159331 -10097252 + L2 LINE L2 3199 3306 -7 2110 141 24 12 chr2 243160183 243160516 -10096067 - MER1B DNA MER1_type 0 337 1 304 330 79 13 chr2 243161407 243161634 -10094949 + L2 LINE L2 2035 2276 -1038 259 361 19 9 chr2 243162456 243162564 -10094019 - MIR3 SINE MIR -7 201 93 1622 190 65 3 chr2 243164633 243164954 -10091629 - MER58B DNA MER1_type 0 341 1 186 283 33 0 chr2 243166121 243166181 -10090402 - L2 LINE L2 -700 2614 2553 1625 220 83 43 chr2 243166422 243166985 -10089598 - L1ME4a LINE L1 -11 6110 5525 772 45 0 18 chr2 243167056 243167167 -10089416 + (TC)n Simple_repeat Simple_repeat 1 109 0 21 71 0 0 chr2 243167817 243167859 -10088724 + AT_rich Low_complexity Low_complexity 1 42 0 305 333 41 8 chr2 243169441 243169564 -10087019 + L2 LINE L2 3100 3226 -46 244 214 0 18 chr2 243220774 243220830 -10035753 + G-rich Low_complexity Low_complexity 4 58 0 1378 77 0 6 chr2 243221771 243221952 -10034631 + AluSq SINE Alu 117 296 -17 213 380 70 31 chr2 243224486 243224715 -10031868 - L3b LINE CR1 -190 1393 1156 222 261 46 0 chr2 243225024 243225089 -10031494 + L2 LINE L2 3198 3265 -7 1986 125 0 0 chr2 243225182 243225463 -10031120 - AluSx SINE Alu -31 281 1 255 270 184 58 chr2 243225547 243225721 -10030862 - MIR SINE MIR -1 261 66 359 323 177 6 chr2 243226121 243226279 -10030304 - L2 LINE L2 -1 3271 3087 487 225 20 76 chr2 243230102 243230307 -10026276 - MLT1K LTR MaLR -343 245 84 307 289 250 0 chr2 243230726 243230882 -10025701 + MIR SINE MIR 62 256 -6 357 343 110 44 chr2 243230909 243231697 -10024886 + L2 LINE L2 961 1800 -1514 964 296 139 51 chr2 243234979 243235934 -10020649 + HAL1 LINE L1 31 1069 -1438 557 324 72 29 chr2 243236249 243236555 -10020028 + HAL1 LINE L1 1957 2275 -232 441 272 118 3 chr2 243236574 243236781 -10019802 + MLT1H LTR MaLR 96 333 -262 775 111 48 8 chr2 243236893 243237019 -10019564 - AluSq/x SINE Alu -182 131 1 1009 177 0 0 chr2 243237019 243237183 -10019400 + LTR45B LTR ERV1 24 187 -302 35631 38 31 2 chr2 243237186 243241772 -10014811 + L1P LINE L1 1 4720 -1426 22 0 0 0 chr2 243243702 243243724 -10012859 + AT_rich Low_complexity Low_complexity 1 22 0 367 190 33 91 chr2 243244793 243244914 -10011669 + MER65A LTR ERV1 1 114 -331 1006 110 58 0 chr2 243245127 243245275 -10011308 + AluSq SINE Alu 135 292 -16 282 29 0 0 chr2 243245275 243245310 -10011273 + (CCA)n Simple_repeat Simple_repeat 1 35 0 271 222 78 65 chr2 243245326 243245479 -10011104 + MER65A LTR ERV1 291 445 0 242 313 101 0 chr2 243245481 243245580 -10011003 - MIR SINE MIR -106 156 48 1084 260 116 15 chr2 243245616 243245983 -10010600 + MER113 DNA MER1_type? 4 429 -92 1351 179 151 0 chr2 243245983 243246235 -10010348 + AluJo SINE Alu 1 290 -12 1084 260 116 15 chr2 243246235 243246332 -10010251 + MER113 DNA MER1_type? 429 515 -6 765 292 43 79 chr2 243246444 243246643 -10009940 - L1ME3A LINE L1 0 6170 5965 945 134 0 8 chr2 243246643 243246777 -10009806 - FLAM_C SINE Alu 0 133 1 765 292 43 79 chr2 243246777 243246800 -10009783 - L1ME3A LINE L1 -205 5965 5943 2107 116 13 10 chr2 243246800 243247111 -10009472 - AluSx SINE Alu 0 312 1 765 292 43 79 chr2 243247111 243247470 -10009113 - L1ME3A LINE L1 -227 5943 5609 1487 153 63 20 chr2 243252273 243252573 -10004010 + MER65A LTR ERV1 1 313 -132 345 274 0 0 chr2 243252593 243252710 -10003873 + (CA)n Simple_repeat Simple_repeat 2 118 0 310 345 26 0 chr2 243252728 243252844 -10003739 + MIR SINE MIR 107 225 -37 1470 116 28 0 chr2 243253186 243253439 -10003144 + AluSx SINE Alu 62 320 0 1252 137 0 0 chr2 243253485 243253675 -10002908 - AluSg/x SINE Alu -6 306 117 303 290 145 25 chr2 243253831 243254031 -10002552 + L2 LINE L2 1808 2031 -1283 539 347 57 11 chr2 243254117 243254382 -10002201 + L2 LINE L2 2240 2516 -798 295 267 195 17 chr2 243254399 243254556 -10002027 + MIR SINE MIR 42 237 -25 2685 95 19 6 chr2 243254556 243254915 -10001668 + THE1B LTR MaLR 1 364 0 295 267 195 17 chr2 243254915 243254938 -10001645 + MIR SINE MIR 237 255 -7 193 333 72 22 chr2 243255212 243255350 -10001233 + L2 LINE L2 2557 2701 -613 634 285 150 29 chr2 243255709 243255817 -10000766 - L1ME4a LINE L1 -17 6104 6011 1959 125 24 3 chr2 243255817 243256114 -10000469 - AluSx SINE Alu -9 303 1 634 285 150 29 chr2 243256114 243256457 -10000126 - L1ME4a LINE L1 -110 6011 5598 22 0 0 0 chr2 243256800 243256822 -9999761 + AT_rich Low_complexity Low_complexity 1 22 0 718 279 181 55 chr2 243257080 243257952 -9998631 + L2 LINE L2 2320 3312 -1 1896 153 7 3 chr2 243258770 243259071 -9997512 - AluJo SINE Alu -10 302 1 568 277 54 27 chr2 243259185 243259369 -9997214 - MIR SINE MIR -17 245 57 849 163 0 15 chr2 243259961 243260096 -9996487 - FLAM_C SINE Alu 0 133 1 2066 45 0 0 chr2 243260271 243260517 -9996066 + L1PA5 LINE L1 5909 6154 0 2088 126 10 0 chr2 243260668 243260977 -9995606 - AluSq SINE Alu -1 312 1 25 31 0 0 chr2 243261026 243261058 -9995525 + AT_rich Low_complexity Low_complexity 1 32 0 193 297 121 11 chr2 243262442 243262533 -9994050 - L2 LINE L2 -8 3264 3164 353 362 24 0 chr2 243262830 243262957 -9993626 - L1MEd LINE L1 -4883 1501 1372 515 312 91 72 chr2 243262964 243263185 -9993398 - L1MEd LINE L1 -4925 1447 1232 2096 123 0 7 chr2 243263185 243263495 -9993088 - AluSx SINE Alu -4 308 1 515 312 91 72 chr2 243263495 243263790 -9992793 - L1MEd LINE L1 -5140 1232 944 2124 120 0 0 chr2 243263790 243264090 -9992493 + AluSx SINE Alu 1 300 -12 515 312 91 72 chr2 243264090 243264743 -9991840 - L1MEd LINE L1 -5428 944 254 298 339 65 8 chr2 243264760 243264884 -9991699 - L2 LINE L2 -2 3311 3181 294 280 88 8 chr2 243265252 243265377 -9991206 + L2 LINE L2 3159 3293 -20 425 207 54 0 chr2 243267035 243267146 -9989437 - LTR16B LTR ERVL 0 464 348 377 365 24 6 chr2 243267238 243267405 -9989178 - HERV16 LTR ERVL -4818 178 9 1051 263 89 80 chr2 243267412 243267629 -9988954 - LTR16B LTR ERVL 0 464 250 595 213 24 8 chr2 243267629 243267756 -9988827 - FLAM_A SINE Alu -1 132 4 1051 263 89 80 chr2 243267756 243267998 -9988585 - LTR16B LTR ERVL -214 250 1 191 267 83 0 chr2 243268745 243268805 -9987778 - MIR SINE MIR -57 151 87 370 235 130 9 chr2 243269449 243269564 -9987019 - L1ME3A LINE L1 -5 6165 6037 539 169 0 11 chr2 243269664 243269753 -9986830 + FLAM_C SINE Alu 18 105 -38 22 0 0 0 chr2 243269761 243269783 -9986800 + AT_rich Low_complexity Low_complexity 1 22 0 838 214 76 9 chr2 243269783 243270007 -9986576 - L1ME3A LINE L1 -114 6056 5818 449 200 110 35 chr2 243270009 243270154 -9986429 - L1ME3A LINE L1 -398 5772 5617 1980 263 101 45 chr2 243270182 243271392 -9985191 - L1ME3A LINE L1 -760 5386 4052 2431 113 19 25 chr2 243271894 243272258 -9984325 - THE1B LTR MaLR 0 364 3 183 143 0 0 chr2 243280639 243280667 -9975916 + L2 LINE L2 3254 3281 -32 340 355 74 26 chr2 243281027 243281216 -9975367 - MIR SINE MIR -19 243 46 223 329 43 86 chr2 243282634 243282938 -9973645 - L2 LINE L2 0 3272 2982 380 184 0 9 chr2 243286283 243286397 -9970186 + CT-rich Low_complexity Low_complexity 1 113 0 200 227 45 15 chr2 243286745 243286811 -9969772 + (GTATG)n Simple_repeat Simple_repeat 5 72 0 348 171 0 0 chr2 243287104 243287186 -9969397 + CT-rich Low_complexity Low_complexity 1 82 0 1603 158 3 58 chr2 243293672 243294002 -9962581 - AluJb SINE Alu 0 312 1 2247 77 0 7 chr2 243294061 243294375 -9962208 - AluY SINE Alu 0 312 1 348 182 33 91 chr2 243295382 243295503 -9961080 + MER65A LTR ERV1 1 114 -331 21 0 0 0 chr2 243295548 243295569 -9961014 + AT_rich Low_complexity Low_complexity 1 21 0 974 119 107 0 chr2 243295724 243295883 -9960700 + AluY SINE Alu 134 309 -2 281 222 90 60 chr2 243295887 243296054 -9960529 + MER65A LTR ERV1 274 445 0 258 317 99 0 chr2 243296056 243296157 -9960426 - MIR SINE MIR -106 156 46 515 259 54 11 chr2 243296191 243296376 -9960207 + MER113 DNA MER1_type? 4 196 -325 564 230 33 7 chr2 243296662 243296814 -9959769 + L1MD2 LINE L1 6050 6205 -154 828 193 0 0 chr2 243296851 243296991 -9959592 - AluSg/x SINE Alu -7 305 166 1052 150 0 0 chr2 243297042 243297202 -9959381 - AluJb SINE Alu -145 167 8 2260 112 0 0 chr2 243297216 243297520 -9959063 - AluY SINE Alu -7 304 1 244 130 0 0 chr2 243297520 243297566 -9959017 + L1MD2 LINE L1 6292 6337 -22 2596 208 36 0 chr2 243298037 243298190 -9958393 - L1MB2 LINE L1 -1 6170 6024 231 114 0 0 chr2 243298190 243298225 -9958358 + (CCCTAA)n Simple_repeat Simple_repeat 5 39 0 2596 208 36 0 chr2 243298225 243298601 -9957982 - L1MB2 LINE L1 -147 6024 5622 245 197 16 0 chr2 243301551 243301612 -9954971 + CT-rich Low_complexity Low_complexity 3 64 0 1391 179 0 12 chr2 243301619 243301871 -9954712 - AluSx SINE Alu 0 312 64 28 0 0 0 chr2 243301880 243301908 -9954675 + AT_rich Low_complexity Low_complexity 1 28 0 533 115 13 0 chr2 243301908 243301986 -9954597 - AluSx SINE Alu -231 82 4 1581 207 19 74 chr2 243301989 243302085 -9954498 + LTR49-int LTR ERV1 2006 2106 -2765 2215 113 0 0 chr2 243302085 243302387 -9954196 - AluSx SINE Alu -10 302 1 1581 207 19 74 chr2 243302387 243302730 -9953853 + LTR49-int LTR ERV1 2106 2415 -2456 2118 117 7 0 chr2 243302730 243303029 -9953554 - AluSx SINE Alu -11 301 1 1581 207 19 74 chr2 243303029 243303104 -9953479 + LTR49-int LTR ERV1 2415 2493 -2378 2376 80 0 0 chr2 243303151 243303452 -9953131 - AluY SINE Alu 0 311 11 749 193 20 15 chr2 243303505 243303707 -9952876 + LTR49-int LTR ERV1 1541 1743 -6377 26 30 0 0 chr2 243303755 243303788 -9952795 + AT_rich Low_complexity Low_complexity 1 33 0 659 185 79 23 chr2 243303788 243303799 -9952784 + LTR49-int LTR ERV1 1781 1790 -3090 558 224 103 0 chr2 243303799 243303906 -9952677 - FLAM_C SINE Alu -15 118 1 659 185 79 23 chr2 243303906 243304174 -9952409 + LTR49-int LTR ERV1 1790 4313 -567 623 93 0 0 chr2 243304180 243304266 -9952317 + AluSg/x SINE Alu 219 304 -6 329 161 12 12 chr2 243304275 243304356 -9952227 - LTR57-int LTR ERVL -4271 1072 992 * 459 180 144 20 chr2 243304347 243304364 -9952219 - LOR1-int LTR ERV1 -3477 1646 1632 192 77 0 0 chr2 243304364 243304390 -9952193 + (TATATG)n Simple_repeat Simple_repeat 3 28 0 459 180 144 20 chr2 243304390 243304526 -9952057 - LOR1-int LTR ERV1 -3491 1632 1099 412 216 17 9 chr2 243304540 243304656 -9951927 + LTR49-int LTR ERV1 2368 2484 -2639 2126 112 10 0 chr2 243304781 243305084 -9951499 - AluSx SINE Alu -6 306 1 302 146 0 0 chr2 243305163 243305218 -9951365 - Alu SINE Alu -1 301 247 664 148 80 28 chr2 243305218 243305454 -9951129 + LTR49-int LTR ERV1 3637 3957 -979 271 62 146 0 chr2 243305480 243305528 -9951055 + LTR49-int LTR ERV1 5338 5392 -939 335 45 0 0 chr2 243305563 243305607 -9950976 - AluY SINE Alu -259 44 1 1978 76 0 8 chr2 243305637 243305900 -9950683 + AluSq SINE Alu 37 297 -16 489 279 14 44 chr2 243306052 243306255 -9950328 + MIR SINE MIR 45 243 -19 339 275 0 0 chr2 243306271 243306391 -9950192 + (CA)n Simple_repeat Simple_repeat 1 120 0 414 292 26 0 chr2 243306445 243306558 -9950025 + MIR SINE MIR 107 222 -40 221 268 49 49 chr2 243309156 243309279 -9947304 + MIR3 SINE MIR 3 125 -83 1980 117 4 0 chr2 243310004 243310278 -9946305 - AluSx SINE Alu -13 299 25 2255 100 0 7 chr2 243310570 243310879 -9945704 - AluSq SINE Alu -6 307 1 31 0 0 0 chr2 243311094 243311125 -9945458 + AT_rich Low_complexity Low_complexity 1 31 0 253 314 74 63 chr2 243312128 243312259 -9944324 - MIR SINE MIR -34 228 93 1662 152 23 30 chr2 243312259 243312562 -9944021 + AluJb SINE Alu 1 301 -11 253 314 74 63 chr2 243312562 243312605 -9943978 - MIR SINE MIR -169 93 52 180 111 0 0 chr2 243315376 243315403 -9941180 + (TGAA)n Simple_repeat Simple_repeat 2 28 0 1603 158 3 58 chr2 243325082 243325412 -9931171 - AluJb SINE Alu 0 312 1 2228 81 0 7 chr2 243325471 243325790 -9930793 - AluY SINE Alu 0 317 1 348 182 33 91 chr2 243326797 243326918 -9929665 + MER65B LTR ERV1 1 114 -417 21 0 0 0 chr2 243326963 243326984 -9929599 + AT_rich Low_complexity Low_complexity 1 21 0 974 119 107 0 chr2 243327139 243327298 -9929285 + AluY SINE Alu 134 309 -2 281 222 90 60 chr2 243327302 243327469 -9929114 + MER65A LTR ERV1 274 445 0 258 317 99 0 chr2 243327471 243327572 -9929011 - MIR SINE MIR -106 156 46 515 259 54 11 chr2 243327606 243327791 -9928792 + MER113 DNA MER1_type? 4 196 -325 564 230 33 7 chr2 243328077 243328229 -9928354 + L1MD2 LINE L1 6050 6205 -154 828 193 0 0 chr2 243328266 243328406 -9928177 - AluSg/x SINE Alu -7 303 164 1052 150 0 0 chr2 243328457 243328617 -9927966 - AluJb SINE Alu -145 167 8 2097 131 0 3 chr2 243328631 243328936 -9927647 - AluY SINE Alu -7 304 1 244 130 0 0 chr2 243328936 243328982 -9927601 + L1MD2 LINE L1 6292 6337 -22 2584 209 36 0 chr2 243329453 243329606 -9926977 - L1MB2 LINE L1 -1 6170 6024 231 114 0 0 chr2 243329606 243329641 -9926942 + (CCCTAA)n Simple_repeat Simple_repeat 5 39 0 2584 209 36 0 chr2 243329641 243330017 -9926566 - L1MB2 LINE L1 -147 6024 5622 312 339 57 0 chr2 243332923 243333047 -9923536 + MIR SINE MIR 112 242 -20 283 305 68 38 chr2 243335032 243335268 -9921315 - Charlie7 DNA MER1_type -155 2457 2215 360 235 0 0 chr2 243335282 243335363 -9921220 + FAM SINE Alu 94 174 -1 565 235 53 53 chr2 243335394 243335713 -9920870 - Charlie7 DNA MER1_type -650 1962 1644 843 138 23 0 chr2 243335732 243335862 -9920721 + AluSq/x SINE Alu 3 135 -177 2017 113 7 0 chr2 243335862 243336153 -9920430 + AluSx SINE Alu 1 293 -19 620 245 43 0 chr2 243336153 243336316 -9920267 + L1PA16 LINE L1 5994 6163 -3 2199 100 0 0 chr2 243336409 243336709 -9919874 + AluY SINE Alu 1 300 -11 3654 251 62 41 chr2 243336749 243337966 -9918617 - Charlie7 DNA MER1_type -1018 1594 346 1991 108 34 7 chr2 243337966 243338263 -9918320 + AluSp SINE Alu 1 305 -8 3654 251 62 41 chr2 243338263 243338326 -9918257 - Charlie7 DNA MER1_type -2266 346 286 192 377 85 0 chr2 243339517 243339647 -9916936 + L3 LINE CR1 853 993 -584 1286 184 109 4 chr2 243339875 243340198 -9916385 - AluJb SINE Alu 0 350 1 2741 140 22 19 chr2 243340205 243340371 -9916212 - L1MA6 LINE L1 0 6886 6722 2229 114 0 0 chr2 243340371 243340678 -9915905 + AluSp SINE Alu 1 307 -6 2741 140 22 19 chr2 243340678 243341109 -9915474 - L1MA6 LINE L1 -164 6722 6294 748 196 0 36 chr2 243341109 243341247 -9915336 - FLAM_C SINE Alu 0 133 1 2741 140 22 19 chr2 243341247 243341971 -9914612 - L1MA6 LINE L1 -592 6294 5467 1369 159 16 40 chr2 243341986 243342238 -9914345 + AluJo SINE Alu 12 257 -55 8532 220 45 28 chr2 243342238 243342676 -9913907 - L1MA6 LINE L1 -1736 4996 4567 1816 78 16 4 chr2 243342676 243342953 -9913630 - AluY SINE Alu 0 314 35 8532 220 45 28 chr2 243342953 243343107 -9913476 - L1MA6 LINE L1 -2165 4567 4417 1980 145 16 0 chr2 243343107 243343410 -9913173 - AluSx SINE Alu -4 308 1 8532 220 45 28 chr2 243343410 243344209 -9912374 - L1MA6 LINE L1 -2315 4417 3633 1863 158 3 7 chr2 243344209 243344512 -9912071 + AluJo SINE Alu 1 302 -10 8532 220 45 28 chr2 243344512 243344738 -9911845 - L1MA6 LINE L1 -3099 3633 3412 1453 167 111 4 chr2 243344738 243345008 -9911575 - AluJb SINE Alu -13 299 1 8532 220 45 28 chr2 243345008 243345315 -9911268 - L1MA6 LINE L1 -3320 3412 3112 533 241 0 9 chr2 243345315 243345423 -9911160 - FLAM_C SINE Alu -19 124 18 8532 220 45 28 chr2 243345423 243345567 -9911016 - L1MA6 LINE L1 -3620 3112 2972 1996 122 0 0 chr2 243345567 243345846 -9910737 + AluSx SINE Alu 1 279 -33 414 0 0 0 chr2 243345846 243345892 -9910691 + (CA)n Simple_repeat Simple_repeat 1 46 0 8532 220 45 28 chr2 243345892 243348942 -9907641 - L1MA6 LINE L1 -3759 2973 2 197 324 90 9 chr2 243349394 243349505 -9907078 + L3 LINE CR1 1165 1284 -293 200 364 64 0 chr2 243349575 243349685 -9906898 + L3 LINE CR1 1386 1502 -75 2190 96 7 3 chr2 243350021 243350324 -9906259 + AluSq SINE Alu 1 304 -9 1709 169 7 3 chr2 243351747 243352055 -9904528 - AluJb SINE Alu -3 309 1 188 250 0 0 chr2 243357811 243357855 -9898728 + L2 LINE L2 3268 3311 -2 219 188 0 0 chr2 243360184 243360232 -9896351 + C-rich Low_complexity Low_complexity 4 51 0 21 57 0 0 chr2 243360582 243360617 -9895966 + GC_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr2 243360829 243360857 -9895726 + GC_rich Low_complexity Low_complexity 1 28 0 27 49 0 0 chr2 243361003 243361044 -9895539 + GC_rich Low_complexity Low_complexity 1 41 0 242 250 0 0 chr2 243362105 243362157 -9894426 + (CGG)n Simple_repeat Simple_repeat 3 54 0 39 84 0 0 chr2 243362292 243362387 -9894196 + GC_rich Low_complexity Low_complexity 1 95 0 219 188 0 0 chr2 243363282 243363330 -9893253 + C-rich Low_complexity Low_complexity 4 51 0 24 0 0 0 chr2 243364092 243364116 -9892467 + GC_rich Low_complexity Low_complexity 1 24 0 2000 95 32 3 chr2 243364760 243365045 -9891538 - AluSq SINE Alu -20 293 1 290 285 58 43 chr2 243367618 243367811 -9888772 - MIR SINE MIR -61 147 1 2117 92 0 20 chr2 243369218 243369544 -9887039 + AluY SINE Alu 2 311 0 2091 120 0 0 chr2 243369595 243369895 -9886688 - AluSg SINE Alu -10 300 1 2364 92 0 0 chr2 243370049 243370355 -9886228 - AluSx SINE Alu -6 306 1 2200 57 4 4 chr2 243370958 243371264 -9885319 + AluY SINE Alu 1 306 0 597 165 0 0 chr2 243372330 243372421 -9884162 - FRAM SINE Alu -65 111 21 2115 96 6 35 chr2 243373080 243373394 -9883189 - AluSq SINE Alu -8 305 1 1683 161 7 11 chr2 243373471 243373757 -9882826 - AluJb SINE Alu -27 285 1 195 164 151 55 chr2 243373822 243373895 -9882688 - MIR3 SINE MIR -3 205 126 829 168 0 0 chr2 243374409 243374534 -9882049 - FLAM_C SINE Alu -8 125 1 497 130 165 0 chr2 243374933 243375048 -9881535 - L1M4 LINE L1 -849 5297 5164 833 147 0 63 chr2 243375048 243375191 -9881392 - AluJo SINE Alu -177 135 2 1247 179 15 4 chr2 243375196 243375458 -9881125 - L1M4 LINE L1 -1014 5132 4868 703 146 140 73 chr2 243375458 243375622 -9880961 - MER21B LTR ERV1 -368 495 321 892 201 0 0 chr2 243375689 243375858 -9880725 - AluJ SINE Alu -24 288 120 850 159 0 7 chr2 243375879 243376017 -9880566 - AluJ SINE Alu -171 141 5 286 336 62 0 chr2 243376022 243376150 -9880433 + MIR SINE MIR 78 213 -49 34 0 0 0 chr2 243376219 243376253 -9880330 + AT_rich Low_complexity Low_complexity 1 34 0 1394 0 13 0 chr2 243376459 243376615 -9879968 - L1PA2 LINE L1 0 6155 5998 191 100 0 25 chr2 243377062 243377102 -9879481 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2112 118 3 10 chr2 243377107 243377421 -9879162 + AluSx SINE Alu 1 312 0 673 269 6 12 chr2 243378128 243378295 -9878288 + MIR SINE MIR 97 262 0 210 267 58 58 chr2 243378324 243378410 -9878173 + L2 LINE L2 3187 3272 0 2202 107 0 0 chr2 243378427 243378725 -9877858 - AluSc SINE Alu -11 298 1 280 232 88 112 chr2 243380017 243380142 -9876441 + L2 LINE L2 3133 3254 -18 293 325 74 56 chr2 243381307 243381541 -9875042 + L2 LINE L2 2838 3093 -179 265 252 77 63 chr2 243383063 243383168 -9873415 + MIR SINE MIR 81 190 -72 1752 136 14 7 chr2 243383168 243383454 -9873129 + AluJb SINE Alu 1 288 -24 265 252 77 63 chr2 243383454 243383491 -9873092 + MIR SINE MIR 190 225 -37 252 307 0 13 chr2 243384082 243384157 -9872426 - MIR SINE MIR -95 113 40 352 217 31 0 chr2 243384454 243384544 -9872039 - MIR SINE MIR -62 146 104 22 56 0 0 chr2 243384849 243384885 -9871698 + GC_rich Low_complexity Low_complexity 1 36 0 16706 72 12 2 chr2 243385394 243387766 -9868817 + Tigger1 DNA MER2_type 24 2417 -1 240 270 32 63 chr2 243387880 243388006 -9868577 - MIR3 SINE MIR -84 124 3 1834 137 3 55 chr2 243388218 243388547 -9868036 - AluJb SINE Alu 0 312 1 263 227 27 13 chr2 243388547 243388622 -9867961 - MIR SINE MIR -98 164 89 1627 190 37 3 chr2 243389035 243389330 -9867253 + AluJb SINE Alu 1 305 -7 180 0 0 0 chr2 243389343 243389363 -9867220 + (A)n Simple_repeat Simple_repeat 1 20 0 2125 99 0 66 chr2 243390323 243390657 -9865926 - AluSx SINE Alu 0 312 1 545 271 24 18 chr2 243391461 243391631 -9864952 - MER5A DNA MER1_type -4 185 15 509 263 117 6 chr2 243391616 243391787 -9864796 + MIR SINE MIR 16 205 -57 * 255 79 0 0 chr2 243394544 243394582 -9862001 + (TAA)n Simple_repeat Simple_repeat 1 38 0 190 395 67 0 chr2 243394589 243394708 -9861875 - MIR SINE MIR -13 249 123 189 89 67 0 chr2 243396018 243396063 -9860520 + (CAGCC)n Simple_repeat Simple_repeat 4 51 0 189 0 0 0 chr2 243396404 243396425 -9860158 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1166 113 52 117 chr2 243396428 243396659 -9859924 - AluSx SINE Alu -57 255 40 232 154 10 199 chr2 243396731 243396932 -9859651 + C-rich Low_complexity Low_complexity 4 166 0 2163 112 0 0 chr2 243397499 243397802 -9858781 - AluSq SINE Alu -10 303 1 433 300 53 22 chr2 243397879 243398106 -9858477 + MLT1L LTR MaLR 359 592 -23 247 280 28 47 chr2 243398864 243398971 -9857612 - MIR SINE MIR -73 189 85 1840 184 95 51 chr2 243398971 243399477 -9857106 - MLT1F LTR MaLR -14 528 1 424 130 152 0 chr2 243399560 243399652 -9856931 + MER53 DNA DNA 1 106 -83 204 297 188 23 chr2 243400882 243401010 -9855573 - MER91B DNA MER1_type 0 190 42 206 262 0 143 chr2 243401189 243401315 -9855268 - MER91B DNA MER1_type -82 108 1 2148 104 10 0 chr2 243401771 243402069 -9854514 - AluSc SINE Alu -8 301 1 2183 104 3 0 chr2 243402349 243402647 -9853936 + AluSx SINE Alu 1 299 -13 889 285 50 18 chr2 243402770 243403167 -9853416 - L1ME3 LINE L1 -23 6139 5730 2283 93 0 22 chr2 243403168 243403481 -9853102 - AluSq SINE Alu -5 308 3 965 185 12 0 chr2 243403494 243403656 -9852927 - FRAM SINE Alu -2 164 1 1949 139 13 7 chr2 243403692 243404002 -9852581 - AluJb SINE Alu 0 312 1 719 191 0 0 chr2 243404443 243404574 -9852009 + MIR SINE MIR 15 145 -117 220 324 135 0 chr2 243405169 243405280 -9851303 - L2 LINE L2 0 3272 3147 252 310 6 13 chr2 243406502 243406660 -9849923 + (TG)n Simple_repeat Simple_repeat 1 157 0 379 328 32 0 chr2 243407549 243407674 -9848909 + MER91B DNA MER1_type 1 129 -61 2333 82 0 0 chr2 243407912 243408206 -9848377 - AluY SINE Alu -17 294 1 216 0 0 0 chr2 243408334 243408358 -9848225 + (TC)n Simple_repeat Simple_repeat 2 25 0 1977 116 14 24 chr2 243408358 243408652 -9847931 - AluSx SINE Alu -21 291 1 242 249 15 38 chr2 243411034 243411145 -9845438 - MIR SINE MIR -58 150 43 212 255 0 0 chr2 243412336 243412387 -9844196 - MIR SINE MIR -113 149 99 21 36 0 0 chr2 243413610 243413638 -9842945 + GC_rich Low_complexity Low_complexity 1 28 0 282 239 56 0 chr2 243416139 243416210 -9840373 - MER63 DNA MER1_type -358 704 4 2107 135 3 3 chr2 243417138 243417450 -9839133 - AluJb SINE Alu 0 312 1 250 263 79 0 chr2 243417842 243417918 -9838665 + L2 LINE L2 3213 3294 -19 2260 95 10 0 chr2 243417935 243418240 -9838343 + AluSx SINE Alu 1 308 -4 1213 140 0 72 chr2 243419195 243419431 -9837152 + AluJb SINE Alu 87 305 -7 269 272 105 53 chr2 243419625 243419652 -9836931 + MIR SINE MIR 81 105 -157 1870 229 70 9 chr2 243419652 243420092 -9836491 + MLT1C LTR MaLR 1 467 0 269 272 105 53 chr2 243420092 243420178 -9836405 + MIR SINE MIR 105 200 -62 844 181 0 0 chr2 243420539 243420672 -9835911 - FLAM_C SINE Alu 0 133 1 329 364 40 17 chr2 243420933 243421106 -9835477 - L1M4 LINE L1 -2940 3206 3030 307 279 72 57 chr2 243421160 243421188 -9835395 + HAL1b LINE L1 954 980 -368 2028 109 3 33 chr2 243421188 243421490 -9835093 - AluSq SINE Alu -20 293 1 307 279 72 57 chr2 243421490 243421848 -9834735 + HAL1b LINE L1 980 1346 -2 526 330 32 11 chr2 243421993 243422178 -9834405 - MIR SINE MIR -61 201 13 264 200 0 0 chr2 243422823 243422883 -9833700 + (CA)n Simple_repeat Simple_repeat 1 60 0 477 348 0 0 chr2 243424314 243424475 -9832108 + MIR SINE MIR 73 233 -29 232 303 45 0 chr2 243424542 243424608 -9831975 - L2 LINE L2 -87 3185 3117 2058 77 95 3 chr2 243424617 243424902 -9831681 + AluY SINE Alu 1 311 0 419 277 80 137 chr2 243425048 243425177 -9831406 + L1MC4a LINE L1 5462 5597 -2211 1574 176 4 14 chr2 243425177 243425456 -9831127 - AluJo SINE Alu -2 310 35 419 277 80 137 chr2 243425456 243425662 -9830921 + L1MC4a LINE L1 5597 5778 -2030 1222 169 27 102 chr2 243425667 243425827 -9830756 + AluJo SINE Alu 1 131 -181 2135 127 0 0 chr2 243425827 243426134 -9830449 + AluSx SINE Alu 1 307 -5 1222 169 27 102 chr2 243426134 243426268 -9830315 + AluJo SINE Alu 131 273 -39 320 163 122 61 chr2 243426268 243426415 -9830168 + L1MC4a LINE L1 5793 5948 -1860 250 270 30 10 chr2 243427686 243427786 -9828797 - MER45A DNA AcHobo -51 127 26 211 324 69 39 chr2 243428134 243428236 -9828347 - MIR SINE MIR -70 192 88 292 380 18 45 chr2 243428380 243428604 -9827979 - MIR SINE MIR -14 248 31 235 272 0 98 chr2 243429148 243429332 -9827251 + CT-rich Low_complexity Low_complexity 6 171 0 2005 124 7 0 chr2 243429952 243430266 -9826317 + AluSx SINE Alu 1 316 0 618 176 96 8 chr2 243430303 243430428 -9826155 - MIR SINE MIR -55 207 72 338 238 148 0 chr2 243430428 243430529 -9826054 - MIR SINE MIR -29 233 118 514 192 13 96 chr2 243431005 243431161 -9825422 + MIR SINE MIR 9 151 -111 318 264 152 39 chr2 243431544 243431722 -9824861 - MIR SINE MIR -46 216 19 28 29 0 0 chr2 243432462 243432497 -9824086 + GC_rich Low_complexity Low_complexity 1 35 0 245 270 9 43 chr2 243432680 243432795 -9823788 + C-rich Low_complexity Low_complexity 3 113 0 218 308 22 11 chr2 243432825 243432916 -9823667 + (CACG)n Simple_repeat Simple_repeat 3 94 0 243 210 0 32 chr2 243433361 243433423 -9823160 + C-rich Low_complexity Low_complexity 1 60 0 799 268 55 4 chr2 243433905 243434140 -9822443 + MIR SINE MIR 15 261 -1 245 250 0 0 chr2 243434464 243434516 -9822067 + (TG)n Simple_repeat Simple_repeat 1 52 0 520 272 53 30 chr2 243434524 243434693 -9821890 - MIR SINE MIR -25 237 65 538 290 129 5 chr2 243435068 243435261 -9821322 - MIR SINE MIR -38 224 8 226 303 92 0 chr2 243435330 243435406 -9821177 - L2 LINE L2 0 3313 3231 1072 254 59 25 chr2 243436000 243436355 -9820228 + MLT1A2 LTR MaLR 1 367 -7 571 314 27 21 chr2 243436749 243436937 -9819646 + MIR SINE MIR 4 192 -70 264 100 0 0 chr2 243437003 243437043 -9819540 + (ATG)n Simple_repeat Simple_repeat 1 40 0 189 303 78 78 chr2 243437618 243437760 -9818823 + MIR SINE MIR 29 170 -92 2290 88 3 0 chr2 243439224 243439529 -9817054 + AluSq SINE Alu 1 306 -7 203 207 146 37 chr2 243439699 243439781 -9816802 - MIR SINE MIR -86 122 32 * 632 238 62 6 chr2 243439774 243439934 -9816649 + MIR SINE MIR 59 227 -35 1038 133 51 44 chr2 243439990 243440205 -9816378 + MLT1E3 LTR MaLR 1 203 -421 878 146 0 7 chr2 243440205 243440342 -9816241 + FLAM_C SINE Alu 2 137 -6 1206 204 142 11 chr2 243440377 243440729 -9815854 + MLT1E3 LTR MaLR 225 622 -2 423 338 38 33 chr2 243442210 243442423 -9814160 + MIR SINE MIR 29 242 -20 233 185 0 46 chr2 243443062 243443127 -9813456 + GA-rich Low_complexity Low_complexity 1 62 0 1440 199 30 3 chr2 243443318 243443620 -9812963 + AluJo SINE Alu 1 310 -2 424 289 48 16 chr2 243444207 243444464 -9812119 - L2 LINE L2 -234 3038 2784 25 65 0 0 chr2 243447771 243447817 -9808766 + GC_rich Low_complexity Low_complexity 1 46 0 1767 173 0 26 chr2 243448379 243448692 -9807891 - AluJb SINE Alu -7 305 1 800 177 0 0 chr2 243448702 243448826 -9807757 - FLAM_A SINE Alu -9 124 1 4348 210 73 101 chr2 243448826 243450124 -9806459 - MER65A-int LTR ERV1 -2957 1914 581 1695 147 0 99 chr2 243450124 243450458 -9806125 - AluJo SINE Alu -1 301 1 180 0 0 0 chr2 243450468 243450488 -9806095 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 4348 210 73 101 chr2 243450488 243450825 -9805758 - MER65A-int LTR ERV1 -4299 572 227 1766 141 11 0 chr2 243450825 243451101 -9805482 + AluSx SINE Alu 1 279 -33 4348 210 73 101 chr2 243451101 243451293 -9805290 - MER65A-int LTR ERV1 -4644 227 131 6958 90 15 19 chr2 243451293 243452266 -9804317 - LTR5 LTR ERVK 0 969 1 4348 210 73 101 chr2 243452266 243452384 -9804199 - MER65A-int LTR ERV1 -4740 131 11 1944 192 22 0 chr2 243452400 243452817 -9803766 - MER65A LTR ERV1 -11 434 9 2073 133 50 14 chr2 243453086 243453448 -9803135 - THE1C LTR MaLR 0 375 1 21 36 0 0 chr2 243455683 243455711 -9800872 + GC_rich Low_complexity Low_complexity 1 28 0 187 326 0 0 chr2 243458668 243458714 -9797869 - L2 LINE L2 0 3272 3227 3499 261 84 73 chr2 243460283 243460489 -9796094 + Charlie7 DNA MER1_type 133 335 -2277 2364 66 0 31 chr2 243460489 243460806 -9795777 - AluY SINE Alu -4 307 1 3499 261 84 73 chr2 243460806 243461156 -9795427 + Charlie7 DNA MER1_type 335 679 -1933 2109 115 3 3 chr2 243461156 243461452 -9795131 - AluSx SINE Alu -16 296 1 3499 261 84 73 chr2 243461452 243463015 -9793568 + Charlie7 DNA MER1_type 679 2282 -330 1414 177 7 35 chr2 243463015 243463208 -9793375 - AluJo SINE Alu 0 308 125 1867 156 7 0 chr2 243463208 243463503 -9793080 + AluSx SINE Alu 1 297 -15 1414 177 7 35 chr2 243463503 243463624 -9792959 - AluJo SINE Alu -183 125 2 3499 261 84 73 chr2 243463624 243463676 -9792907 + Charlie7 DNA MER1_type 2282 2332 -280 1281 164 0 9 chr2 243463702 243463915 -9792668 - AluJb SINE Alu -7 305 95 253 386 77 8 chr2 243464396 243464655 -9791928 + L2 LINE L2 2983 3259 -54 334 315 77 0 chr2 243465955 243466085 -9790498 - MIR SINE MIR -11 251 112 880 222 157 4 chr2 243469335 243469596 -9786987 - AluJo SINE Alu -1 311 11 248 293 113 83 chr2 243469668 243469829 -9786754 - L2 LINE L2 -69 3203 3031 2498 53 3 0 chr2 243469829 243470129 -9786454 + AluY SINE Alu 1 301 -10 248 293 113 83 chr2 243470129 243470196 -9786387 - L2 LINE L2 -241 3031 2968 306 217 50 50 chr2 243470278 243470398 -9786185 + MIR SINE MIR 2 121 -141 1799 148 11 0 chr2 243470600 243470883 -9785700 - AluSx SINE Alu -10 302 17 313 253 63 89 chr2 243471196 243471386 -9785197 - L1MC/D LINE L1 -2604 5438 5254 2043 122 0 35 chr2 243471400 243471712 -9784871 - AluSx SINE Alu -11 301 1 528 202 20 0 chr2 243471773 243471872 -9784711 + AluJ/FLAM SINE Alu 1 101 -211 420 230 57 40 chr2 243471901 243472070 -9784513 + L1MB3 LINE L1 5764 5938 -242 * 798 185 60 109 chr2 243472067 243472369 -9784214 + L1MB2 LINE L1 5883 6169 -2 1015 132 33 28 chr2 243472839 243473021 -9783562 - AluSg/x SINE Alu -1 311 129 2020 136 0 10 chr2 243473027 243473336 -9783247 - AluSx SINE Alu -6 306 1 2164 116 0 0 chr2 243473346 243473649 -9782934 - AluSg SINE Alu -7 303 1 1550 211 0 6 chr2 243473716 243474028 -9782555 + AluSx SINE Alu 1 310 -2 2059 133 10 3 chr2 243474046 243474354 -9782229 + AluSg SINE Alu 1 310 0 234 0 0 0 chr2 243474356 243474382 -9782201 + (GGAA)n Simple_repeat Simple_repeat 2 27 0 2570 235 64 7 chr2 243474414 243475133 -9781450 - L1MD2 LINE L1 -154 6205 5446 1420 205 50 0 chr2 243475205 243475488 -9781095 + AluJb SINE Alu 16 312 0 621 277 59 45 chr2 243475641 243475817 -9780766 + L1ME3A LINE L1 5595 5767 -403 2328 98 0 0 chr2 243475817 243476124 -9780459 + AluSg SINE Alu 2 308 -2 621 277 59 45 chr2 243476124 243476304 -9780279 + L1ME3A LINE L1 5767 5956 -214 1485 231 6 3 chr2 243476353 243476664 -9779919 + AluJo SINE Alu 1 312 0 1977 84 3 68 chr2 243476995 243477305 -9779278 - AluSx SINE Alu -11 301 12 1297 196 12 90 chr2 243477469 243477602 -9778981 + AluJo SINE Alu 1 143 -159 2279 77 3 10 chr2 243477602 243477915 -9778668 + AluY SINE Alu 1 311 0 1297 196 12 90 chr2 243477915 243478103 -9778480 + AluJo SINE Alu 143 297 -5 261 79 0 0 chr2 243478129 243478167 -9778416 - MER65A-int LTR ERV1 -3207 4913 4876 830 185 23 93 chr2 243478247 243478463 -9778120 + AluJb SINE Alu 105 305 -7 1910 149 3 0 chr2 243478589 243478891 -9777692 - AluSx SINE Alu -9 303 1 261 180 0 0 chr2 243478920 243478970 -9777613 + T-rich Low_complexity Low_complexity 1 50 0 1996 133 0 20 chr2 243479006 243479307 -9777276 - AluSx SINE Alu -17 295 1 850 214 33 34 chr2 243479307 243479743 -9776840 - MER65A-int LTR ERV1 -4428 2330 1720 660 195 8 8 chr2 243479743 243479861 -9776722 + FLAM_C SINE Alu 1 118 -15 850 214 33 34 chr2 243479861 243479902 -9776681 - MER65A-int LTR ERV1 -5038 1720 1680 1511 123 0 0 chr2 243480079 243480291 -9776292 - AluSq SINE Alu -11 302 91 1830 210 15 91 chr2 243480462 243480538 -9776045 - MER65A-int LTR ERV1 -2377 2494 2414 2089 116 10 0 chr2 243480538 243480832 -9775751 + AluSp SINE Alu 1 297 -16 1830 210 15 91 chr2 243480832 243480843 -9775740 - MER65A-int LTR ERV1 -2457 2414 2404 1432 186 95 0 chr2 243480843 243481128 -9775455 + AluSx SINE Alu 1 312 0 1830 210 15 91 chr2 243481128 243481993 -9774590 - MER65A-int LTR ERV1 -2467 2404 1896 1304 250 54 74 chr2 243481128 243481555 -9775028 - LTR57-int LTR ERVL -3817 1526 1115 * 1980 143 0 7 chr2 243481555 243481862 -9774721 + AluSx SINE Alu 7 311 -1 1304 250 54 74 chr2 243481862 243482083 -9774500 - LTR57-int LTR ERVL -4228 1115 891 180 89 44 22 chr2 243482100 243482134 -9774449 + (TA)n Simple_repeat Simple_repeat 1 38 -8 1667 166 7 24 chr2 243482134 243482424 -9774159 - AluJb SINE Alu -27 285 1 180 89 44 22 chr2 243482424 243482434 -9774149 + (TA)n Simple_repeat Simple_repeat 38 46 0 820 161 0 0 chr2 243482434 243482558 -9774025 - FLAM_A SINE Alu -9 124 1 1936 144 0 25 chr2 243482583 243482903 -9773680 - AluSx SINE Alu 0 312 1 5008 211 57 86 chr2 243482906 243483160 -9773423 - MER65A-int LTR ERV1 -2999 1872 1612 2067 124 0 0 chr2 243483160 243483459 -9773124 + AluSq SINE Alu 1 299 -14 5008 211 57 86 chr2 243483459 243483520 -9773063 - MER65A-int LTR ERV1 -3259 1612 1551 2124 119 7 0 chr2 243483520 243483822 -9772761 - AluSq SINE Alu -8 305 2 5008 211 57 86 chr2 243483822 243484803 -9771780 - MER65A-int LTR ERV1 -3320 1551 543 1526 188 14 0 chr2 243484803 243485080 -9771503 - AluJb SINE Alu -24 288 8 5008 211 57 86 chr2 243485080 243485447 -9771136 - MER65A-int LTR ERV1 -4328 543 267 618 14 0 0 chr2 243485447 243485518 -9771065 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 5008 211 57 86 chr2 243485518 243485763 -9770820 - MER65A-int LTR ERV1 -4604 267 16 1405 181 7 0 chr2 243485784 243486076 -9770507 - MER65A LTR ERV1 -11 434 141 2135 150 0 0 chr2 243487478 243487856 -9768727 - AluSq SINE Alu 0 378 1 614 246 77 77 chr2 243487860 243488198 -9768385 + Charlie7 DNA MER1_type 1945 2282 -330 553 146 0 11 chr2 243488201 243488290 -9768293 - AluJ SINE Alu -24 288 201 733 156 8 16 chr2 243488291 243488419 -9768164 - AluJ SINE Alu -182 130 4 1606 133 27 73 chr2 243488510 243488810 -9767773 - AluSx SINE Alu -15 297 12 1912 136 7 7 chr2 243488892 243489186 -9767397 + AluSx SINE Alu 1 294 -18 1541 101 132 19 chr2 243489757 243490014 -9766569 - AluSc SINE Alu 0 309 24 390 316 53 0 chr2 243491401 243491534 -9765049 - MIR SINE MIR -11 251 112 207 0 0 0 chr2 243493809 243493832 -9762751 + (CAG)n Simple_repeat Simple_repeat 1 23 0 1271 201 73 7 chr2 243495060 243495333 -9761250 - AluJb SINE Alu -17 295 5 1309 166 109 14 chr2 243495336 243495619 -9760964 - AluJb SINE Alu -2 310 1 903 101 8 8 chr2 243495805 243495934 -9760649 + AluSp SINE Alu 35 163 -150 2020 88 0 58 chr2 243496441 243496662 -9759921 - AluSx SINE Alu 0 312 141 2004 130 16 0 chr2 243496662 243496969 -9759614 - AluSx SINE Alu 0 312 1 2020 88 0 58 chr2 243496969 243497089 -9759494 - AluSx SINE Alu -171 141 16 1894 110 7 0 chr2 243497089 243497371 -9759212 - LTR43 LTR ERV1 -318 284 1 322 318 66 76 chr2 243497494 243497692 -9758891 - L1ME3A LINE L1 0 6170 5975 1735 143 43 0 chr2 243497695 243497974 -9758609 - AluJb SINE Alu -20 292 2 1648 107 43 4 chr2 243498019 243498300 -9758283 + LTR43 LTR ERV1 311 602 0 1398 183 146 14 chr2 243498323 243498673 -9757910 + LTR47A LTR ERVL 1 396 -56 1618 173 48 3 chr2 243498675 243498964 -9757619 + AluJo SINE Alu 9 310 -2 252 352 8 0 chr2 243499020 243499148 -9757435 - LOR1-int LTR ERV1 -529 4425 4297 1959 116 3 14 chr2 243499149 243499472 -9757111 + AluSx SINE Alu 1 320 0 886 144 101 1 chr2 243500019 243500304 -9756279 - LOR1-int LTR ERV1 -341 7779 7434 1865 154 7 3 chr2 243500304 243500609 -9755974 - AluSx SINE Alu -6 306 1 1430 190 15 19 chr2 243500633 243500902 -9755681 + AluJb SINE Alu 1 268 -44 450 0 0 0 chr2 243500907 243500957 -9755626 + (TG)n Simple_repeat Simple_repeat 2 51 0 1921 103 3 53 chr2 243500957 243501257 -9755326 - AluSq SINE Alu -28 285 1 2055 136 0 3 chr2 243501598 243501899 -9754684 - AluSx SINE Alu -12 300 1 527 216 117 9 chr2 243503526 243503739 -9752844 + AluJo SINE Alu 7 242 -70 1302 203 24 17 chr2 243503924 243504214 -9752369 + AluJo SINE Alu 1 292 -20 30 77 0 0 chr2 243504214 243504279 -9752304 + AT_rich Low_complexity Low_complexity 1 65 0 3890 211 32 48 chr2 243505908 243507211 -9749372 - pTR5 LTR ERV1 -521 1917 743 1583 171 3 39 chr2 243508936 243509246 -9747337 + AluJo SINE Alu 2 300 -12 2265 131 120 5 chr2 243510816 243511198 -9745385 - MSTA LTR MaLR 0 428 3 2115 144 75 42 chr2 243511221 243511890 -9744693 - MER51A LTR ERV1 -9 625 1 367 250 0 33 chr2 243511962 243512082 -9744501 - LTR45B LTR ERV1 -100 389 274 4450 18 0 4 chr2 243512109 243512615 -9743968 - L1PA3 LINE L1 0 6155 5652 276 173 25 25 chr2 243514000 243514081 -9742502 + LTR57-int LTR ERVL 992 1072 -4271 623 93 0 0 chr2 243514090 243514176 -9742407 - AluSg/x SINE Alu -6 303 218 625 190 75 29 chr2 243514181 243514449 -9742134 - LOR1-int LTR ERV1 -566 4314 4060 558 224 103 0 chr2 243514449 243514556 -9742027 + FLAM_C SINE Alu 1 118 -15 625 190 75 29 chr2 243514556 243514567 -9742016 - LOR1-int LTR ERV1 -820 4060 1781 26 30 0 0 chr2 243514567 243514600 -9741983 + AT_rich Low_complexity Low_complexity 1 33 0 1903 194 33 35 chr2 243514648 243514903 -9741680 - LOR1-int LTR ERV1 -6377 1743 1489 2086 115 3 0 chr2 243514903 243515191 -9741392 + AluY SINE Alu 11 299 -12 1903 194 33 35 chr2 243515191 243515533 -9741050 - LOR1-int LTR ERV1 -6631 1489 1147 1057 94 0 0 chr2 243515534 243515672 -9740911 + AluSq/x SINE Alu 1 138 -174 1065 133 36 0 chr2 243515816 243515981 -9740602 - AluSx SINE Alu -137 175 5 1062 129 6 0 chr2 243515981 243516151 -9740432 + L1MA6 LINE L1 6130 6300 0 1328 184 109 4 chr2 243516158 243516496 -9740087 + AluJb SINE Alu 1 365 0 203 388 68 14 chr2 243516724 243516871 -9739712 - L3 LINE CR1 -584 993 839 350 56 0 19 chr2 243569055 243569109 -9687474 + (TC)n Simple_repeat Simple_repeat 1 53 0 1490 168 25 7 chr2 243569109 243569383 -9687200 - AluJb SINE Alu -31 281 3 282 288 0 0 chr2 243571203 243571269 -9685314 + MIR SINE MIR 106 171 -91 244 335 11 73 chr2 243571722 243571901 -9684682 + L3 LINE CR1 1386 1553 -24 724 248 104 5 chr2 243571904 243572106 -9684477 - MER58A DNA MER1_type 0 224 3 2263 95 13 0 chr2 243572492 243572798 -9683785 + AluSg SINE Alu 1 310 0 353 297 88 26 chr2 243573274 243573466 -9683117 - MLT1L LTR MaLR 0 615 412 1930 103 53 3 chr2 243573704 243573986 -9682597 - AluSx SINE Alu -16 296 1 2266 50 13 17 chr2 243573995 243574296 -9682287 - AluY SINE Alu -11 300 1 985 243 108 42 chr2 243574408 243574808 -9681775 + MLT1G LTR MaLR 127 552 -38 2406 159 31 38 chr2 243574811 243575066 -9681517 - L1MB2 LINE L1 -3 6168 5916 2347 93 0 0 chr2 243575066 243575367 -9681216 + AluSx SINE Alu 1 301 -11 2406 159 31 38 chr2 243575367 243575589 -9680994 - L1MB2 LINE L1 -255 5916 5694 2238 103 6 0 chr2 243575677 243575988 -9680595 + AluSp SINE Alu 1 313 0 319 249 111 71 chr2 243576079 243576304 -9680279 + HAL1b LINE L1 571 804 -544 360 0 0 0 chr2 243576310 243576350 -9680233 + (CA)n Simple_repeat Simple_repeat 2 41 0 786 181 32 7 chr2 243576353 243576508 -9680075 - Tigger2 DNA MER2_type -11 2707 2549 772 218 6 6 chr2 243576516 243576672 -9679911 + AluJb SINE Alu 144 299 -13 2059 122 0 0 chr2 243576675 243576969 -9679614 - AluJb SINE Alu -18 294 1 1561 174 20 10 chr2 243577094 243577393 -9679190 - Tigger2 DNA MER2_type -150 2568 2267 376 157 0 14 chr2 243577376 243577446 -9679137 - Tigger2 DNA MER2_type -2649 69 1 * 583 222 0 12 chr2 243577462 243577633 -9678950 + (TG)n Simple_repeat Simple_repeat 2 170 0 553 294 200 10 chr2 243577923 243578233 -9678350 - L3 LINE CR1 -3 1574 1206 2274 106 0 0 chr2 243579041 243579344 -9677239 - AluSx SINE Alu -9 303 1 2146 102 7 0 chr2 243579700 243580003 -9676580 - AluY SINE Alu -6 305 1 1721 160 0 3 chr2 243580027 243580309 -9676274 - AluJo SINE Alu -19 293 13 2550 195 53 14 chr2 243580326 243580891 -9675692 - L1MD3 LINE L1 -14 7981 7395 456 197 8 102 chr2 243580892 243580929 -9675654 - MLT1F1 LTR MaLR -451 116 77 2943 34 6 6 chr2 243580929 243581278 -9675305 - L1PA5 LINE L1 -1 6153 5805 456 197 8 102 chr2 243581278 243581367 -9675216 - MLT1F1 LTR MaLR -490 77 2 576 206 8 15 chr2 243581369 243581500 -9675083 - L1MD3 LINE L1 -718 7277 7148 1966 129 0 11 chr2 243581500 243581825 -9674758 + AluSx SINE Alu 1 322 0 1074 148 18 6 chr2 243581835 243582004 -9674579 + FAM SINE Alu 1 171 -4 2259 195 27 14 chr2 243582004 243582487 -9674096 - L1MC3 LINE L1 -179 7606 7118 1140 191 26 105 chr2 243582596 243583026 -9673557 + Charlie1 DNA MER1_type 2212 2607 -154 241 133 0 0 chr2 243583029 243583074 -9673509 - L1MB7 LINE L1 -13 6171 6127 503 177 0 0 chr2 243583093 243583189 -9673394 - L1MB7 LINE L1 -42 6142 6047 2056 121 0 0 chr2 243583259 243583570 -9673013 - AluSx SINE Alu 0 311 1 1269 261 120 21 chr2 243583973 243584440 -9672143 + MLT1G1 LTR MaLR 80 592 -3 455 284 76 90 chr2 243584619 243584675 -9671908 - L1ME4a LINE L1 0 6121 6066 2445 82 0 0 chr2 243584675 243584978 -9671605 - AluSx SINE Alu -9 303 1 455 284 76 90 chr2 243584978 243585132 -9671451 - L1ME4a LINE L1 -55 6066 5914 222 0 35 0 chr2 243585153 243585182 -9671401 + (TTTG)n Simple_repeat Simple_repeat 1 176 0 1889 144 14 0 chr2 243585182 243585459 -9671124 - AluSx SINE Alu -1 309 1 883 118 0 22 chr2 243585873 243586009 -9670574 + FLAM_C SINE Alu 1 133 0 24 67 0 0 chr2 243586034 243586079 -9670504 + AT_rich Low_complexity Low_complexity 1 45 0 2313 106 0 28 chr2 243586153 243586475 -9670108 + AluSq SINE Alu 1 313 0 1153 181 25 16 chr2 243587178 243587421 -9669162 + L1MC2 LINE L1 5926 6170 -174 1431 194 98 42 chr2 243587425 243587564 -9669019 + MER21B LTR ERV1 369 499 -364 2400 73 20 10 chr2 243587564 243587734 -9668849 - AluSx SINE Alu -9 303 127 2270 113 10 0 chr2 243587734 243588043 -9668540 - AluSp SINE Alu -1 312 1 2400 73 20 10 chr2 243588043 243588172 -9668411 - AluSx SINE Alu -185 127 1 1431 194 98 42 chr2 243588172 243588368 -9668215 + MER21B LTR ERV1 499 723 -140 807 161 0 0 chr2 243588374 243588486 -9668097 + AluSq/x SINE Alu 9 120 -192 357 155 0 0 chr2 243588516 243588574 -9668009 + MER21B LTR ERV1 703 760 -103 1467 143 39 81 chr2 243588575 243588732 -9667851 - AluJo SINE Alu -15 297 158 2336 97 0 3 chr2 243588732 243589031 -9667552 - AluSg SINE Alu -8 302 5 1467 143 39 81 chr2 243589031 243589181 -9667402 - AluJo SINE Alu -154 158 3 927 134 0 15 chr2 243589283 243589417 -9667166 + FLAM_C SINE Alu 1 132 -1 596 176 6 39 chr2 243589422 243589604 -9666979 + GA-rich Low_complexity Low_complexity 2 177 0 288 226 118 0 chr2 243589926 243590019 -9666564 - L1M4 LINE L1 -2168 3978 3875 210 247 96 27 chr2 243590642 243590715 -9665868 - MIR SINE MIR -62 200 123 2232 98 7 10 chr2 243590909 243591205 -9665378 + AluSx SINE Alu 1 295 -17 1114 54 8 0 chr2 243591207 243591337 -9665246 + AluSg SINE Alu 1 131 -179 404 165 52 72 chr2 243592146 243592243 -9664340 + MER5A DNA MER1_type 11 105 -84 1474 175 0 12 chr2 243592744 243592995 -9663588 - AluJo SINE Alu -64 248 1 2462 82 0 0 chr2 243593016 243593309 -9663274 + AluSq SINE Alu 1 293 -20 2418 102 0 6 chr2 243594204 243594517 -9662066 + AluSx SINE Alu 1 311 -1 819 225 52 5 chr2 243595072 243595263 -9661320 + MIR SINE MIR 40 239 -23 1152 186 121 43 chr2 243595871 243596151 -9660432 + AluJb SINE Alu 1 302 0 2218 68 65 14 chr2 243596159 243596453 -9660130 + AluSg1 SINE Alu 1 309 0 2219 114 0 0 chr2 243596757 243597056 -9659527 + AluSx SINE Alu 1 299 -13 478 312 49 5 chr2 243597153 243597358 -9659225 - MLT1K LTR MaLR -41 547 334 754 289 13 18 chr2 243597472 243597697 -9658886 + MIR SINE MIR 17 240 -22 2367 92 3 0 chr2 243597764 243598058 -9658525 + AluSg SINE Alu 1 295 -15 861 257 18 42 chr2 243598265 243598549 -9658034 - MLT1C LTR MaLR -4 463 187 2353 100 3 0 chr2 243598564 243598863 -9657720 - AluSx SINE Alu -12 300 1 687 208 64 0 chr2 243600581 243600706 -9655877 - FLAM_C SINE Alu 0 133 1 1643 165 38 111 chr2 243601493 243601668 -9654915 - L1MC3 LINE L1 -790 6995 6809 2139 92 3 11 chr2 243601668 243601950 -9654633 - AluSx SINE Alu -32 280 1 1643 165 38 111 chr2 243601950 243602096 -9654487 - L1MC3 LINE L1 -976 6809 6726 1977 147 0 7 chr2 243602096 243602382 -9654201 + AluSx SINE Alu 1 284 -28 1643 165 38 111 chr2 243602382 243602592 -9653991 - L1MC3 LINE L1 -1059 6726 6502 821 254 163 3 chr2 243604363 243604682 -9651901 + L1MB5 LINE L1 5255 5624 -2184 2307 161 118 0 chr2 243604682 243605105 -9651478 - MLT2B2 LTR ERVL -42 473 1 251 198 147 51 chr2 243605108 243605233 -9651350 + L1MB5 LINE L1 5622 5766 -355 871 207 0 40 chr2 243605233 243605407 -9651176 + FAM SINE Alu 1 167 -8 251 198 147 51 chr2 243605407 243605438 -9651145 + L1MB5 LINE L1 5766 5793 -328 2233 109 6 13 chr2 243605461 243605772 -9650811 - AluSq SINE Alu -4 309 1 456 332 15 0 chr2 243605812 243606011 -9650572 + L1M4 LINE L1 4023 4224 -1922 1711 182 10 3 chr2 243606015 243606306 -9650277 + AluJb SINE Alu 1 293 -19 342 0 0 0 chr2 243606307 243606345 -9650238 + (CA)n Simple_repeat Simple_repeat 2 39 0 286 182 18 0 chr2 243606451 243606506 -9650077 - HERVL LTR ERVL -1076 4578 4523 453 258 62 34 chr2 243606509 243606718 -9649865 - MER34B LTR ERV1 -5 560 346 355 44 0 0 chr2 243606831 243606929 -9649654 + AluSp/q SINE Alu 243 340 0 834 191 4 53 chr2 243606929 243607016 -9649567 + L1MB5 LINE L1 5927 6017 -157 2348 115 3 0 chr2 243607016 243607328 -9649255 - AluSq SINE Alu 0 313 1 834 191 4 53 chr2 243607328 243607465 -9649118 + L1MB5 LINE L1 6017 6140 -34 895 153 0 53 chr2 243607468 243607638 -9648945 + FRAM SINE Alu 1 161 -5 1293 132 13 70 chr2 243607796 243607825 -9648758 - AluJo SINE Alu -16 296 267 2513 61 0 0 chr2 243607825 243608122 -9648461 + AluY SINE Alu 1 297 -14 1293 132 13 70 chr2 243608122 243608320 -9648263 - AluJo SINE Alu -45 267 82 430 282 27 69 chr2 243609099 243609160 -9647423 - MIR SINE MIR -48 214 152 2467 88 3 0 chr2 243609160 243609467 -9647116 - AluSx SINE Alu -1 311 4 430 282 27 69 chr2 243609467 243609604 -9646979 - MIR SINE MIR -110 152 24 2331 81 0 3 chr2 243609904 243610188 -9646395 + AluSq SINE Alu 1 283 -30 1203 189 14 42 chr2 243610463 243610749 -9645834 + MER33 DNA MER1_type 1 278 -46 2164 142 3 0 chr2 243610755 243611064 -9645519 - AluJb SINE Alu -2 310 1 2323 112 3 3 chr2 243611110 243611458 -9645125 + AluSx SINE Alu 1 348 0 586 297 62 46 chr2 243612531 243612837 -9643746 + L2 LINE L2 2930 3240 -73 1816 136 33 36 chr2 243612845 243613146 -9643437 - AluJo SINE Alu -12 300 1 254 219 62 47 chr2 243613253 243613381 -9643202 + L1MC/D LINE L1 5701 5830 -1978 2135 186 27 112 chr2 243613414 243613625 -9642958 + Charlie1a DNA MER1_type 72 299 -2462 1952 147 10 13 chr2 243613625 243613924 -9642659 + AluJb SINE Alu 1 298 -14 2135 186 27 112 chr2 243613924 243613980 -9642603 + Charlie1a DNA MER1_type 299 358 -2403 1995 128 0 7 chr2 243613980 243614253 -9642330 + AluSx SINE Alu 1 271 -41 2135 186 27 112 chr2 243614253 243614620 -9641963 + Charlie1a DNA MER1_type 358 653 -802 1857 153 49 33 chr2 243614620 243614731 -9641852 + AluJo SINE Alu 1 109 -203 207 0 0 0 chr2 243614731 243614754 -9641829 + (TC)n Simple_repeat Simple_repeat 2 24 0 * 261 0 0 0 chr2 243614753 243614782 -9641801 + (TA)n Simple_repeat Simple_repeat 2 30 0 1857 153 49 33 chr2 243614754 243614977 -9641606 + AluJo SINE Alu 109 312 0 242 320 71 78 chr2 243616457 243616520 -9640063 + L3b LINE CR1 1263 1325 -258 2126 104 17 3 chr2 243616520 243616832 -9639751 - AluSx SINE Alu 0 312 1 242 320 71 78 chr2 243616832 243617037 -9639546 + L3b LINE CR1 1325 1529 -54 365 296 40 53 chr2 243618641 243618793 -9637790 + MIR3 SINE MIR 49 198 -10 727 176 8 8 chr2 243619651 243619770 -9636813 + FLAM_A SINE Alu 1 119 -14 200 174 0 43 chr2 243619770 243619816 -9636767 + (TATATG)n Simple_repeat Simple_repeat 5 48 0 2521 65 0 0 chr2 243620095 243620386 -9636197 + AluSc SINE Alu 2 292 -17 261 119 0 0 chr2 243620386 243620428 -9636155 + (GGGA)n Simple_repeat Simple_repeat 3 44 0 2455 89 0 0 chr2 243620557 243620859 -9635724 + AluSx SINE Alu 1 302 -10 236 360 0 0 chr2 243621068 243621143 -9635440 + MIR3 SINE MIR 127 201 -7 2210 52 14 24 chr2 243621527 243621849 -9634734 + AluY SINE Alu 1 319 0 1047 142 40 0 chr2 243621908 243622084 -9634499 - AluJb SINE Alu 0 312 130 1774 161 7 40 chr2 243622093 243622225 -9634358 + AluJo SINE Alu 13 148 -164 2047 102 7 26 chr2 243622225 243622528 -9634055 + AluSx SINE Alu 1 297 -15 1774 161 7 40 chr2 243622528 243622694 -9633889 + AluJo SINE Alu 148 301 -11 28 35 0 35 chr2 243622701 243622733 -9633850 + AT_rich Low_complexity Low_complexity 1 32 -23 773 138 17 0 chr2 243622733 243622849 -9633734 + FLAM_C SINE Alu 1 118 -15 28 35 0 35 chr2 243622849 243622873 -9633710 + AT_rich Low_complexity Low_complexity 32 55 0 926 102 82 68 chr2 243622927 243623007 -9633576 + MER2 DNA MER2_type 9 86 -259 2230 107 28 0 chr2 243623007 243623297 -9633286 + AluSx SINE Alu 1 298 -14 926 102 82 68 chr2 243623297 243623495 -9633088 + MER2 DNA MER2_type 86 323 -22 2177 114 3 3 chr2 243623568 243623876 -9632707 + AluSg SINE Alu 1 308 -2 2358 107 0 3 chr2 243623971 243624280 -9632303 - AluSx SINE Alu -4 308 1 217 289 53 13 chr2 243624386 243624462 -9632121 - L2 LINE L2 -1 3271 3193 1192 104 37 0 chr2 243625321 243625484 -9631099 + AluSg/x SINE Alu 112 280 -32 1689 170 10 3 chr2 243625512 243625800 -9630783 + AluJb SINE Alu 1 290 -22 1599 200 0 4 chr2 243625811 243626091 -9630492 + AluJo SINE Alu 1 279 -33 602 138 11 0 chr2 243626091 243626185 -9630398 - AluJ/FLAM SINE Alu -216 96 2 738 168 42 0 chr2 243626948 243627067 -9629516 - FLAM_A SINE Alu -9 124 1 1633 203 17 87 chr2 243627207 243627638 -9628945 + L1ME LINE L1 5171 5631 -535 2395 119 0 0 chr2 243627638 243627949 -9628634 - AluSx SINE Alu -1 311 1 1633 203 17 87 chr2 243627949 243628058 -9628525 + L1ME LINE L1 5631 5640 -526 2068 144 0 0 chr2 243628058 243628349 -9628234 + AluSx SINE Alu 1 291 -21 1633 203 17 87 chr2 243628349 243628518 -9628065 + L1ME LINE L1 5640 5819 -347 399 149 0 0 chr2 243628519 243628593 -9627990 + (CA)n Simple_repeat Simple_repeat 1 74 0 353 164 0 0 chr2 243628609 243628670 -9627913 - MER8 DNA MER2_type 0 239 179 353 193 57 0 chr2 243628847 243628935 -9627648 + HsTC2 DNA Tc2 1801 1893 -5 2377 73 28 0 chr2 243630945 243631231 -9625352 + AluSc SINE Alu 1 294 -15 396 0 0 0 chr2 243631718 243631762 -9624821 + (CA)n Simple_repeat Simple_repeat 2 45 0 617 161 11 0 chr2 243632287 243632380 -9624203 + FLAM_C SINE Alu 14 107 -36 458 33 17 0 chr2 243632668 243632728 -9623855 + (CA)n Simple_repeat Simple_repeat 1 61 0 237 33 0 0 chr2 243632842 243632872 -9623711 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 283 300 61 36 chr2 243632872 243633306 -9623277 - L1MC4a LINE L1 -1634 6174 5707 207 0 0 0 chr2 243635396 243635419 -9621164 + (TTG)n Simple_repeat Simple_repeat 2 24 0 234 0 0 0 chr2 243636025 243636051 -9620532 + (TG)n Simple_repeat Simple_repeat 2 27 0 295 208 101 10 chr2 243636741 243636873 -9619710 - LTR50 LTR ERVL -2 793 383 485 210 171 6 chr2 243637011 243637187 -9619396 - LTR50 LTR ERVL -590 205 1 2385 81 0 3 chr2 243637516 243637814 -9618769 + AluSg SINE Alu 1 297 -13 411 280 32 6 chr2 243637826 243637983 -9618600 - MERVL LTR ERVL -160 5325 5165 522 255 84 8 chr2 243638040 243638349 -9618234 - MERVL LTR ERVL -644 5120 4750 832 271 66 0 chr2 243638384 243638642 -9617941 - MERVL LTR ERVL -1083 4681 4407 405 204 344 5 chr2 243639379 243639565 -9617018 - MIR SINE MIR -12 250 2 189 0 0 0 chr2 243639945 243639966 -9616617 + (T)n Simple_repeat Simple_repeat 1 21 0 572 163 14 116 chr2 243639966 243640113 -9616470 - AluJb SINE Alu -179 133 2 272 293 49 0 chr2 243640130 243640235 -9616348 - AluSg/x SINE Alu -98 202 134 441 263 10 0 chr2 243641697 243641796 -9614787 + ERVL LTR ERVL 4468 4567 -1197 2035 125 24 0 chr2 243641881 243642168 -9614415 + AluSx SINE Alu 1 294 -18 26 50 0 0 chr2 243642168 243642208 -9614375 + AT_rich Low_complexity Low_complexity 1 40 0 286 248 110 18 chr2 243642214 243642323 -9614260 + MER34B LTR ERV1 38 156 -409 2264 45 0 4 chr2 243642504 243642770 -9613813 + AluY SINE Alu 3 267 -44 2241 104 6 22 chr2 243642886 243643203 -9613380 - AluSx SINE Alu 0 312 1 710 206 8 0 chr2 243643666 243643792 -9612791 - FLAM_A SINE Alu -4 129 3 232 261 118 42 chr2 243644078 243644197 -9612386 - L3 LINE CR1 -142 1435 1308 2550 66 0 0 chr2 243644278 243644581 -9612002 - AluY SINE Alu -8 303 1 1950 168 0 7 chr2 243644902 243645212 -9611371 - AluJb SINE Alu -4 308 1 2281 148 52 55 chr2 243645223 243645269 -9611314 - L1MB3 LINE L1 -1 6182 6137 1575 168 46 14 chr2 243645269 243645554 -9611029 - AluJo SINE Alu -17 295 2 2281 148 52 55 chr2 243645554 243646002 -9610581 - L1MB3 LINE L1 -46 6137 5689 949 121 7 7 chr2 243646003 243646144 -9610439 + AluSq/x SINE Alu 1 141 -171 362 151 0 3 chr2 243646144 243646212 -9610371 - Alu SINE Alu -256 52 1 212 270 262 40 chr2 243646212 243646338 -9610245 - L3 LINE CR1 -764 813 660 1225 170 59 9 chr2 243646452 243646920 -9609663 + L1MB7 LINE L1 5576 6184 0 197 196 250 36 chr2 243646961 243647017 -9609566 - L3 LINE CR1 -1232 345 278 2726 136 14 9 chr2 243647690 243648116 -9608467 - MSTA LTR MaLR 0 428 1 2317 76 0 21 chr2 243648158 243648493 -9608090 - AluY SINE Alu 0 329 1 677 176 0 34 chr2 243648493 243648612 -9607971 - FLAM_A SINE Alu -12 130 16 2293 113 3 0 chr2 243648689 243648991 -9607592 + AluSx SINE Alu 1 303 -9 311 133 0 0 chr2 243648991 243649036 -9607547 + AluSg/x SINE Alu 134 178 -124 1184 200 14 29 chr2 243649301 243649576 -9607007 - AluY SINE Alu -40 271 1 665 168 0 35 chr2 243649582 243649695 -9606888 - FLAM_A SINE Alu -18 124 16 2338 112 0 0 chr2 243649772 243650075 -9606508 + AluSx SINE Alu 1 303 -9 1190 146 0 0 chr2 243650075 243650253 -9606330 + AluSg/x SINE Alu 134 311 -1 1594 174 71 3 chr2 243650259 243650610 -9605973 - L1MB3 LINE L1 -39 6144 5770 2214 92 31 3 chr2 243650645 243650937 -9605646 - AluSx SINE Alu -12 300 1 340 216 0 0 chr2 243650939 243651013 -9605570 - L1MB3 LINE L1 -397 5786 5713 969 111 25 80 chr2 243652382 243652440 -9604143 - L1MA4 LINE L1 -1 6299 6239 1932 146 27 0 chr2 243652440 243652741 -9603842 - AluSx SINE Alu -3 309 1 969 111 25 80 chr2 243652741 243652881 -9603702 - L1MA4 LINE L1 -61 6239 6112 1559 160 7 30 chr2 243652896 243653165 -9603418 - AluJo SINE Alu -47 265 3 1468 158 112 29 chr2 243653183 243653490 -9603093 - AluJo SINE Alu 0 312 1 816 160 8 8 chr2 243653538 243653669 -9602914 - AluJo SINE Alu -177 135 5 207 0 0 0 chr2 243653682 243653705 -9602878 + (T)n Simple_repeat Simple_repeat 1 23 0 2715 46 0 0 chr2 243653820 243654125 -9602458 - AluY SINE Alu -6 305 1 939 202 6 6 chr2 243654127 243654295 -9602288 - AluJb SINE Alu -16 296 129 2157 139 0 0 chr2 243654640 243654934 -9601649 - AluSx SINE Alu -18 294 1 523 228 0 0 chr2 243655099 243655200 -9601383 - FRAM SINE Alu -77 99 1 723 231 0 0 chr2 243656248 243656408 -9600175 + MLT1B LTR MaLR 231 390 0 2234 93 3 26 chr2 243656728 243657069 -9599514 - AluSq SINE Alu 0 313 2 278 108 108 68 chr2 243657088 243657162 -9599421 + MLT1K LTR MaLR 511 587 -1 2305 122 0 0 chr2 243657834 243658146 -9598437 - AluSx SINE Alu 0 312 1 2415 88 0 0 chr2 243658815 243659110 -9597473 - AluSg SINE Alu -14 296 2 2015 116 62 0 chr2 243659386 243659662 -9596921 + AluSx SINE Alu 1 293 -19 504 338 40 33 chr2 243659739 243660014 -9596569 + L1MC4a LINE L1 4885 5161 -985 285 273 59 130 chr2 243660261 243660363 -9596220 - L1MB3 LINE L1 -2143 5665 5557 1681 156 45 17 chr2 243660363 243660652 -9595931 + AluJo SINE Alu 1 297 -15 2338 90 0 3 chr2 243660654 243660977 -9595606 + AluSp SINE Alu 1 322 0 285 273 59 130 chr2 243660977 243661000 -9595583 - L1MB3 LINE L1 -2252 5556 5533 2246 93 4 0 chr2 243661000 243661280 -9595303 + AluSx SINE Alu 17 297 -15 285 273 59 130 chr2 243661280 243661386 -9595197 - L1MB3 LINE L1 -2275 5533 5445 422 251 202 22 chr2 243661800 243661983 -9594600 + MIR SINE MIR 35 250 -12 233 302 145 12 chr2 243662669 243662841 -9593742 + L2 LINE L2 2866 3060 -212 589 118 0 0 chr2 243662941 243663026 -9593557 - Alu SINE Alu -8 302 218 2132 123 3 0 chr2 243663111 243663411 -9593172 - AluSg SINE Alu -5 305 5 356 303 67 5 chr2 243663412 243663607 -9592976 + L1MC4a LINE L1 5661 5867 -1941 244 170 21 21 chr2 243663868 243663915 -9592668 + L2 LINE L2 3261 3307 -6 1703 114 4 0 chr2 243664187 243664489 -9592094 + AluSg/x SINE Alu 83 385 0 2253 112 3 0 chr2 243665102 243665398 -9591185 + AluSx SINE Alu 1 297 -15 272 303 106 0 chr2 243665493 243665635 -9590948 - MLT1J LTR MaLR -280 231 75 739 214 42 18 chr2 243666060 243666251 -9590332 + FRAM SINE Alu 1 176 0 876 142 0 0 chr2 243666299 243666419 -9590164 + FLAM_C SINE Alu 1 120 -23 524 134 10 0 chr2 243666419 243666516 -9590067 + (CA)n Simple_repeat Simple_repeat 1 98 0 1953 157 0 10 chr2 243666646 243666939 -9589644 + AluJo SINE Alu 1 290 -22 343 273 175 98 chr2 243667073 243667209 -9589374 + L1MC/D LINE L1 3629 3753 -2393 1871 133 63 3 chr2 243667209 243667494 -9589089 + AluSx SINE Alu 1 302 -10 343 273 175 98 chr2 243667494 243667705 -9588878 + L1MC/D LINE L1 3753 4003 -2143 2175 109 7 0 chr2 243667711 243668024 -9588559 + AluSp SINE Alu 1 313 0 401 252 10 0 chr2 243668171 243668274 -9588309 + U13 snRNA snRNA 1 104 0 264 313 61 30 chr2 243668325 243668587 -9587996 + L1MC/D LINE L1 5008 5277 -869 1720 169 20 26 chr2 243668641 243668943 -9587640 + AluJo SINE Alu 1 300 -12 317 316 38 0 chr2 243668951 243669030 -9587553 + L1MC/D LINE L1 5284 5365 -2443 320 283 45 45 chr2 243669033 243669199 -9587384 + L1MC/D LINE L1 5437 5605 -2203 1969 160 3 7 chr2 243669199 243669493 -9587090 + AluSx SINE Alu 1 293 -19 25 0 0 0 chr2 243669752 243669777 -9586806 + AT_rich Low_complexity Low_complexity 1 25 0 1571 145 4 0 chr2 243669787 243670015 -9586568 - AluSx SINE Alu -83 229 1 317 298 50 19 chr2 243670206 243670367 -9586216 + L1MC2 LINE L1 5437 5602 -2206 1900 136 40 0 chr2 243670372 243670684 -9585899 + AluSx SINE Alu 1 323 0 1989 153 23 0 chr2 243672436 243672736 -9583847 + AluSx SINE Alu 1 307 -5 480 180 0 0 chr2 243673102 243673191 -9583392 + L1MC2 LINE L1 5607 5695 -649 917 216 0 0 chr2 243673193 243673364 -9583219 - AluJb SINE Alu -5 307 137 1989 122 5 277 chr2 243673364 243673590 -9582993 + L1MC2 LINE L1 5685 5971 -373 549 244 25 0 chr2 243673590 243673709 -9582874 + FLAM_A SINE Alu 5 126 -16 1989 122 5 277 chr2 243673709 243673957 -9582626 + L1MC2 LINE L1 5971 6092 -252 1622 189 0 35 chr2 243673957 243674102 -9582481 + AluJb SINE Alu 1 150 -162 2022 143 0 26 chr2 243674102 243674410 -9582173 + AluJb SINE Alu 1 300 -12 1622 189 0 35 chr2 243674410 243674576 -9582007 + AluJb SINE Alu 150 301 -11 1989 122 5 277 chr2 243674576 243674764 -9581819 + L1MC2 LINE L1 6092 6329 -15 2188 90 0 17 chr2 243674768 243675097 -9581486 + AluSx SINE Alu 5 328 0 21 0 0 0 chr2 243675259 243675280 -9581303 + AT_rich Low_complexity Low_complexity 1 21 0 2096 124 33 13 chr2 243675280 243675586 -9580997 + AluSx SINE Alu 1 312 0 709 307 100 65 chr2 243675757 243676395 -9580188 + L2 LINE L2 2553 3242 -30 2462 97 3 3 chr2 243676538 243676878 -9579705 + AluSp SINE Alu 1 340 0 363 197 28 0 chr2 243677039 243677110 -9579473 + MIR SINE MIR 92 164 -98 1584 173 0 15 chr2 243677549 243677809 -9578774 + AluJb SINE Alu 22 277 -35 2249 141 0 0 chr2 243677963 243678275 -9578308 - AluSx SINE Alu 0 312 1 1140 193 0 0 chr2 243678324 243678511 -9578072 - AluJo SINE Alu -5 307 121 2385 160 151 21 chr2 243678552 243679028 -9577555 - MLT1F LTR MaLR 0 542 5 486 225 29 14 chr2 243679033 243679171 -9577412 - LTR67 LTR ERVL -6 551 412 492 278 122 28 chr2 243679514 243679769 -9576814 + L1MC4a LINE L1 5635 5819 -302 189 0 0 0 chr2 243679773 243679794 -9576789 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1381 147 144 63 chr2 243679818 243680165 -9576418 - THE1C LTR MaLR 0 375 1 180 357 0 48 chr2 243680168 243680252 -9576331 + L2 LINE L2 3139 3218 -54 1995 99 72 31 chr2 243680282 243680575 -9576008 - AluSp SINE Alu -2 311 7 2203 91 35 0 chr2 243680582 243680867 -9575716 - AluSq SINE Alu -18 295 1 225 94 0 0 chr2 243681053 243681085 -9575498 + (CCA)n Simple_repeat Simple_repeat 3 34 0 2341 93 0 7 chr2 243681118 243681435 -9575148 + AluSx SINE Alu 1 312 0 1358 180 4 60 chr2 243681808 243681947 -9574636 - AluJo SINE Alu -50 262 144 1892 99 92 0 chr2 243681947 243682219 -9574364 - AluSg SINE Alu -13 297 1 1358 180 4 60 chr2 243682219 243682346 -9574237 - AluJo SINE Alu -168 144 11 1278 261 120 42 chr2 243682387 243682939 -9573644 - MLT1G1 LTR MaLR 0 595 1 1020 146 6 6 chr2 243682957 243683115 -9573468 - AluJb SINE Alu -20 292 135 2070 149 0 16 chr2 243683487 243683796 -9572787 - AluSx SINE Alu -8 304 1 279 250 12 0 chr2 243683799 243683883 -9572700 + L1ME1 LINE L1 6082 6166 0 205 189 22 133 chr2 243684199 243684289 -9572294 - L2 LINE L2 -266 3006 2927 1095 157 42 37 chr2 243684390 243684607 -9571976 - AluJo SINE Alu -8 304 87 299 225 0 42 chr2 243684627 243684698 -9571885 - MER5A DNA MER1_type -92 97 30 478 300 60 79 chr2 243684711 243684751 -9571832 - L2 LINE L2 -1259 2055 2016 2333 69 14 0 chr2 243684751 243685039 -9571544 + AluSp SINE Alu 1 292 -21 478 300 60 79 chr2 243685039 243685321 -9571262 - L2 LINE L2 -1298 2016 1730 2277 61 14 0 chr2 243685321 243685632 -9570951 - AluSp SINE Alu 0 315 1 478 300 60 79 chr2 243685632 243685644 -9570939 - L2 LINE L2 -1584 1730 1719 2208 79 0 33 chr2 243685644 243685947 -9570636 - AluSc SINE Alu -15 294 2 478 300 60 79 chr2 243685947 243686062 -9570521 - L2 LINE L2 -1595 1719 1611 548 124 113 0 chr2 243686075 243686172 -9570411 + MER53 DNA DNA 1 108 -81 29 28 0 0 chr2 243686918 243686954 -9569629 + GC_rich Low_complexity Low_complexity 1 36 0 839 276 129 37 chr2 243688404 243688839 -9567744 - L2 LINE L2 0 3313 2839 204 194 16 48 chr2 243690294 243690356 -9566227 + A-rich Low_complexity Low_complexity 1 60 0 429 203 0 0 chr2 243690760 243690829 -9565754 - AluSg/x SINE Alu -27 283 215 481 207 12 0 chr2 243690851 243690933 -9565650 + AluJb SINE Alu 205 287 -25 908 471 53 0 chr2 243690933 243691196 -9565387 - AluJo SINE Alu -31 281 5 1268 200 98 15 chr2 243691362 243691627 -9564956 + AluJo SINE Alu 1 287 -25 2255 117 0 0 chr2 243691632 243691931 -9564652 + AluSx SINE Alu 1 299 -13 1764 155 36 4 chr2 243692281 243692559 -9564024 - AluJb SINE Alu -24 288 2 242 265 121 45 chr2 243692643 243692775 -9563808 + MER5A DNA MER1_type 17 158 -31 26 0 0 0 chr2 243692869 243692895 -9563688 + AT_rich Low_complexity Low_complexity 1 26 0 1815 162 28 0 chr2 243693873 243694163 -9562420 - AluSx SINE Alu -6 306 9 2674 33 0 0 chr2 243694331 243694633 -9561950 - AluY SINE Alu -9 302 1 2104 115 16 0 chr2 243694874 243695178 -9561405 - AluSp SINE Alu -4 309 1 2294 103 0 3 chr2 243695178 243695478 -9561105 - AluSq SINE Alu -14 299 1 1402 188 57 40 chr2 243695833 243695973 -9560610 + AluJb SINE Alu 1 137 -175 2056 120 0 7 chr2 243695973 243696284 -9560299 + AluSx SINE Alu 5 313 0 1402 188 57 40 chr2 243696284 243696440 -9560143 + AluJb SINE Alu 137 303 -9 2327 103 0 0 chr2 243697111 243697411 -9559172 - AluSx SINE Alu -12 300 1 22 0 0 0 chr2 243697423 243697445 -9559138 + AT_rich Low_complexity Low_complexity 1 22 0 1788 161 11 3 chr2 243697445 243697731 -9558852 - AluJb SINE Alu -22 290 3 1205 196 94 25 chr2 243698027 243698302 -9558281 + AluJo SINE Alu 1 294 -18 1964 137 3 7 chr2 243698313 243698612 -9557971 + AluSx SINE Alu 1 298 -14 201 274 268 39 chr2 243698613 243698766 -9557817 + MIR SINE MIR 74 261 -1 1170 175 116 95 chr2 243698827 243699003 -9557580 - AluJo SINE Alu -9 293 107 2296 99 0 0 chr2 243699003 243699296 -9557287 + AluSg SINE Alu 1 293 -17 1170 175 116 95 chr2 243699296 243699404 -9557179 - AluJo SINE Alu -195 107 3 2310 82 0 0 chr2 243699426 243699733 -9556850 - AluY SINE Alu 0 307 1 741 172 9 9 chr2 243699743 243699859 -9556724 - FLAM_C SINE Alu -22 121 6 378 345 92 0 chr2 243699937 243700079 -9556504 - L2 LINE L2 -11 3261 3107 2350 97 0 6 chr2 243700164 243700475 -9556108 - AluSq SINE Alu -4 309 1 854 170 71 71 chr2 243700564 243700788 -9555795 - AluJb SINE Alu -2 310 87 3922 204 116 29 chr2 243700827 243701177 -9555406 - Charlie1 DNA MER1_type -12 2749 2431 204 40 0 0 chr2 243701177 243701202 -9555381 + (TA)n Simple_repeat Simple_repeat 2 26 0 3922 204 116 29 chr2 243701202 243702071 -9554512 - Charlie1 DNA MER1_type -330 2431 1424 232 260 234 0 chr2 243702152 243702229 -9554354 - Charlie1 DNA MER1_type -2666 95 1 589 202 0 47 chr2 243702407 243702536 -9554047 + MER3 DNA MER1_type 14 136 -73 1956 150 0 7 chr2 243702552 243702852 -9553731 - AluSx SINE Alu -14 298 1 2343 153 149 2 chr2 243702877 243703393 -9553190 - L1MC3 LINE L1 0 7785 7194 2506 71 0 6 chr2 243703414 243703725 -9552858 - AluY SINE Alu -2 309 1 341 191 56 45 chr2 243703725 243703814 -9552769 + MER3 DNA MER1_type 119 208 -1 1367 229 44 47 chr2 243703996 243704268 -9552315 - L1ME2 LINE L1 -11 6153 5881 2245 82 85 32 chr2 243704268 243704609 -9551974 - L1PA13 LINE L1 0 6163 5805 1367 229 44 47 chr2 243704609 243704786 -9551797 - L1ME2 LINE L1 -283 5881 5705 2090 122 3 16 chr2 243705845 243706157 -9550426 - AluSx SINE Alu -4 308 1 185 0 40 0 chr2 243706159 243706184 -9550399 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 1906 140 0 27 chr2 243706288 243706588 -9549995 - AluJb SINE Alu -20 292 1 862 228 0 6 chr2 243706639 243706797 -9549786 + FRAM SINE Alu 1 156 -20 1518 243 58 74 chr2 243706803 243707024 -9549559 - L1ME3 LINE L1 -5 6157 5934 2553 157 48 2 chr2 243707024 243707437 -9549146 - MSTB1 LTR MaLR 0 432 1 1518 243 58 74 chr2 243707437 243707552 -9549031 - L1ME3 LINE L1 -228 5934 5819 1959 134 3 37 chr2 243707552 243707873 -9548710 - AluSx SINE Alu -2 310 1 1518 243 58 74 chr2 243707873 243708157 -9548426 - L1ME3 LINE L1 -343 5819 5546 1095 102 48 24 chr2 243708471 243708638 -9547945 - AluSg/x SINE Alu -16 296 126 4805 60 11 58 chr2 243709386 243710038 -9546545 - L1PA6 LINE L1 -3 6151 5531 180 0 0 0 chr2 243710038 243710058 -9546525 + (TA)n Simple_repeat Simple_repeat 2 21 0 204 102 102 41 chr2 243711920 243711969 -9544614 + CT-rich Low_complexity Low_complexity 1 52 0 1746 184 10 3 chr2 243711970 243712275 -9544308 - AluJb SINE Alu -5 307 1 2255 112 0 0 chr2 243713316 243713610 -9542973 + AluSx SINE Alu 1 294 -18 2893 7 0 0 chr2 243713610 243713919 -9542664 + AluYa5 SINE Alu 1 309 -2 1035 248 40 61 chr2 243714741 243715137 -9541446 - HsTC2 DNA Tc2 -3 1895 1332 453 245 165 25 chr2 243715273 243715601 -9540982 - HsTC2 DNA Tc2 -1423 475 30 1879 138 40 17 chr2 243715624 243715921 -9540662 - AluJb SINE Alu -7 305 2 2471 63 0 7 chr2 243715967 243716269 -9540314 + AluY SINE Alu 1 300 -11 202 265 142 44 chr2 243717877 243718081 -9538502 + L2 LINE L2 994 1217 -2097 2080 137 70 25 chr2 243718081 243718440 -9538143 - THE1C LTR MaLR 0 375 1 1085 176 112 0 chr2 243718464 243718714 -9537869 + L1MD3 LINE L1 7718 7995 0 647 179 36 0 chr2 243718900 243719012 -9537571 - FLAM_C SINE Alu -10 133 18 21 36 0 0 chr2 243719201 243719229 -9537354 + AT_rich Low_complexity Low_complexity 1 28 0 2360 88 7 3 chr2 243719331 243719639 -9536944 - AluSg SINE Alu -1 309 1 2290 78 13 16 chr2 243719639 243719945 -9536638 - AluSp SINE Alu -8 305 1 1952 117 3 55 chr2 243719959 243720268 -9536315 - AluSx SINE Alu -19 293 1 421 296 80 15 chr2 243720268 243720467 -9536116 + L2 LINE L2 1765 1976 -1338 1634 175 24 17 chr2 243720467 243720764 -9535819 - AluJo SINE Alu -13 299 1 240 268 85 0 chr2 243720825 243720907 -9535676 - L1ME4a LINE L1 -52 6069 5981 25 0 0 0 chr2 243720922 243720947 -9535636 + AT_rich Low_complexity Low_complexity 1 25 0 491 201 170 38 chr2 243721368 243721527 -9535056 + MIR SINE MIR 83 262 0 1972 132 3 32 chr2 243721989 243722300 -9534283 + AluSx SINE Alu 1 302 -10 766 176 15 22 chr2 243722377 243722513 -9534070 + FLAM_A SINE Alu 7 141 -1 22 0 0 0 chr2 243722585 243722607 -9533976 + AT_rich Low_complexity Low_complexity 1 22 0 1815 172 52 9 chr2 243722995 243723321 -9533262 + MER2 DNA MER2_type 1 340 -5 37 0 0 0 chr2 243723445 243723482 -9533101 + AT_rich Low_complexity Low_complexity 1 37 0 623 155 0 19 chr2 243723483 243723586 -9532997 - FLAM_C SINE Alu -5 138 38 1319 202 80 17 chr2 243723593 243723880 -9532703 - AluJo SINE Alu -5 307 3 514 134 0 72 chr2 243723925 243724022 -9532561 + FLAM_A SINE Alu 37 126 -16 193 274 57 57 chr2 243724183 243724289 -9532294 + L2 LINE L2 2739 2844 -470 619 256 112 26 chr2 243725715 243726062 -9530521 - L1ME4a LINE L1 -92 6029 5653 801 206 155 16 chr2 243726360 243726554 -9530029 + MER58A DNA MER1_type 4 224 0 2358 94 0 13 chr2 243727281 243727590 -9528993 - AluSx SINE Alu -7 305 1 815 198 97 88 chr2 243727746 243728054 -9528529 + L2 LINE L2 3003 3313 0 431 275 50 10 chr2 243728056 243728256 -9528327 - L1ME LINE L1 -365 5756 5549 2042 109 4 0 chr2 243728450 243728716 -9527867 + AluSq SINE Alu 1 267 -46 1504 194 26 20 chr2 243728765 243729069 -9527514 + AluJb SINE Alu 1 306 -6 1987 116 0 60 chr2 243729191 243729493 -9527090 + AluSx SINE Alu 1 284 -28 805 181 8 8 chr2 243729550 243729683 -9526900 + FLAM_A SINE Alu 1 133 0 822 320 94 37 chr2 243730040 243730362 -9526221 + L2 LINE L2 2305 2660 -654 2061 159 0 3 chr2 243730362 243730671 -9525912 - AluSx SINE Alu -4 308 1 822 320 94 37 chr2 243730671 243730785 -9525798 + L2 LINE L2 2660 2766 -548 241 268 12 24 chr2 243730874 243730956 -9525627 + CT-rich Low_complexity Low_complexity 4 84 0 2057 116 0 34 chr2 243731186 243731501 -9525082 + AluSx SINE Alu 1 305 0 278 356 77 34 chr2 243731529 243731827 -9524756 - L2 LINE L2 -672 2642 2332 229 305 42 21 chr2 243731921 243732016 -9524567 + Tigger8 DNA MER2_type 41 137 -529 1305 116 63 10 chr2 243732346 243732553 -9524030 - L1PA14 LINE L1 -2 6159 5942 1827 172 7 3 chr2 243732770 243733073 -9523510 - AluJb SINE Alu -8 304 1 399 290 90 15 chr2 243733120 243733320 -9523263 + L3 LINE CR1 1106 1320 -257 1786 167 30 7 chr2 243733455 243733760 -9522823 - AluJb SINE Alu 0 312 1 181 259 348 9 chr2 243733786 243733898 -9522685 + MIR SINE MIR 47 196 -66 2142 219 86 53 chr2 243734159 243734895 -9521688 + L1MC5 LINE L1 6670 7429 -532 932 172 0 0 chr2 243734903 243735048 -9521535 + AluJo SINE Alu 1 145 -167 27 0 0 0 chr2 243735519 243735546 -9521037 + AT_rich Low_complexity Low_complexity 1 27 0 584 311 5 0 chr2 243736054 243736236 -9520347 - L1MC/D LINE L1 -575 5587 5425 1982 138 0 7 chr2 243737221 243737510 -9519073 - AluSx SINE Alu -21 291 5 237 33 0 0 chr2 243738425 243738455 -9518128 + (TG)n Simple_repeat Simple_repeat 1 30 0 2081 109 11 0 chr2 243738833 243739109 -9517474 + AluSx SINE Alu 1 279 -33 398 235 111 39 chr2 243739545 243739698 -9516885 - L1MC/D LINE L1 -690 5431 5268 369 43 0 0 chr2 243739704 243739751 -9516832 + (TG)n Simple_repeat Simple_repeat 2 48 0 278 192 0 0 chr2 243739773 243739825 -9516758 - Alu SINE Alu -9 293 242 1694 186 11 0 chr2 243739825 243740099 -9516484 - AluJo SINE Alu -35 277 1 2037 147 0 6 chr2 243740175 243740489 -9516094 - AluSx SINE Alu 0 312 1 25 0 0 0 chr2 243740575 243740600 -9515983 + AT_rich Low_complexity Low_complexity 1 25 0 2484 61 0 0 chr2 243741519 243741812 -9514771 - AluY SINE Alu -18 293 1 2139 117 0 0 chr2 243742070 243742396 -9514187 - AluSx SINE Alu 0 326 1 895 144 0 0 chr2 243742398 243742530 -9514053 - AluSq/x SINE Alu -179 133 2 559 243 188 30 chr2 243742574 243742776 -9513807 - MIR SINE MIR -21 241 8 2317 105 0 0 chr2 243742856 243743162 -9513421 + AluY SINE Alu 1 306 -5 449 266 164 23 chr2 243743176 243743439 -9513144 - L1MC/D LINE L1 -1988 5820 5521 2263 100 3 0 chr2 243744141 243744440 -9512143 - AluSg SINE Alu -10 300 1 315 122 0 0 chr2 243745135 243745184 -9511399 + (T)n Simple_repeat Simple_repeat 1 49 0 213 287 0 19 chr2 243746390 243746460 -9510123 + MER5B DNA MER1_type 91 170 -19 285 193 255 55 chr2 243748655 243748800 -9507783 - L1ME LINE L1 -413 5708 5535 344 235 162 20 chr2 243749909 243750113 -9506470 + L1ME4a LINE L1 5672 5904 -217 21 0 0 0 chr2 243750122 243750143 -9506440 + AT_rich Low_complexity Low_complexity 1 21 0 29 78 0 0 chr2 243750933 243750997 -9505586 + AT_rich Low_complexity Low_complexity 1 64 0 2274 106 0 34 chr2 243751196 243751516 -9505067 - AluSg SINE Alu 0 310 2 1487 148 111 30 chr2 243751728 243751998 -9504585 + AluJb SINE Alu 1 292 -20 1750 130 60 39 chr2 243752289 243752509 -9504074 - MER44D DNA MER2_type -1883 608 394 2009 118 0 23 chr2 243752509 243752813 -9503770 + AluSx SINE Alu 1 297 -15 1750 130 60 39 chr2 243752813 243752923 -9503660 - MER44D DNA MER2_type -2097 394 1 190 213 85 21 chr2 243752944 243752991 -9503592 - L2 LINE L2 0 3313 3264 787 296 120 58 chr2 243753005 243753732 -9502851 + L3 LINE CR1 666 1437 -140 229 261 87 14 chr2 243756047 243756116 -9500467 - MIR3 SINE MIR -11 197 124 2003 104 90 0 chr2 243758215 243758494 -9498089 + AluSx SINE Alu 1 304 -8 772 225 197 34 chr2 243758641 243759077 -9497506 - Charlie4a DNA MER1_type -1 507 1 191 291 47 58 chr2 243759089 243759175 -9497408 - MIR SINE MIR -104 104 20 208 0 62 0 chr2 243759814 243759846 -9496737 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 1523 145 53 53 chr2 243761317 243761620 -9494963 + 7SLRNA srpRNA srpRNA 2 304 -16 2157 85 4 0 chr2 243761759 243762029 -9494554 - AluSq SINE Alu -10 303 33 2369 110 3 0 chr2 243762029 243762336 -9494247 - AluSq SINE Alu -4 309 1 1195 134 0 0 chr2 243763127 243763306 -9493277 + AluY SINE Alu 122 300 -11 304 213 194 9 chr2 243763950 243764058 -9492525 + MIR SINE MIR 116 243 -19 198 268 0 0 chr2 243764091 243764132 -9492451 + MIR SINE MIR 162 202 -60 2153 116 10 0 chr2 243764464 243764758 -9491825 - AluSq SINE Alu -16 297 1 2221 105 3 0 chr2 243764760 243765055 -9491528 - AluSx SINE Alu -16 296 1 2436 87 0 0 chr2 243765390 243765700 -9490883 + AluSx SINE Alu 1 310 -2 240 111 0 0 chr2 243765864 243765900 -9490683 + (T)n Simple_repeat Simple_repeat 1 36 0 562 96 0 0 chr2 243766277 243766350 -9490233 - AluJo SINE Alu -24 288 216 * 679 200 7 41 chr2 243766347 243766492 -9490091 - AluJo SINE Alu -170 142 3 345 243 81 22 chr2 243767559 243767695 -9488888 - MIR SINE MIR -38 224 81 201 329 27 0 chr2 243767952 243768025 -9488558 - MIR SINE MIR 0 262 188 814 103 0 26 chr2 243768098 243768214 -9488369 + FLAM_C SINE Alu 29 141 -2 280 279 139 8 chr2 243768236 243768282 -9488301 - MIR SINE MIR -101 161 122 807 183 0 0 chr2 243768282 243768413 -9488170 + FLAM_C SINE Alu 3 133 0 280 279 139 8 chr2 243768413 243768488 -9488095 - MIR SINE MIR -140 122 24 250 357 63 14 chr2 243769483 243769626 -9486957 + MIR3 SINE MIR 5 154 -54 21 0 0 0 chr2 243771910 243771931 -9484652 + AT_rich Low_complexity Low_complexity 1 21 0 1582 181 38 0 chr2 243772223 243772516 -9484067 - AluJo SINE Alu -8 304 1 391 198 114 78 chr2 243772838 243773005 -9483578 - LTR48 LTR ERV1 0 787 615 285 242 61 10 chr2 243773032 243773131 -9483452 - LTR48 LTR ERV1 -303 484 381 294 191 322 0 chr2 243773165 243773280 -9483303 - LTR48 LTR ERV1 -479 308 157 242 344 0 10 chr2 243773267 243773363 -9483220 - MER34 LTR ERV1 -447 95 1 * 23 0 0 0 chr2 243774541 243774564 -9482019 + AT_rich Low_complexity Low_complexity 1 23 0 189 111 56 28 chr2 243775165 243775201 -9481382 - L3 LINE CR1 -26 1551 1515 29 0 0 62 chr2 243775208 243775232 -9481351 + AT_rich Low_complexity Low_complexity 1 22 -23 2216 118 0 3 chr2 243775232 243775538 -9481045 - AluSx SINE Alu -6 306 2 29 0 0 62 chr2 243775538 243775561 -9481022 + AT_rich Low_complexity Low_complexity 22 45 0 369 0 0 0 chr2 243775568 243775609 -9480974 + (CA)n Simple_repeat Simple_repeat 2 42 0 275 283 98 59 chr2 243776102 243776292 -9480291 + MIR SINE MIR 19 212 -50 31 44 0 0 chr2 243776486 243776531 -9480052 + AT_rich Low_complexity Low_complexity 1 45 0 862 137 0 0 chr2 243776532 243776649 -9479934 - AluJb SINE Alu -195 117 1 685 231 67 152 chr2 243776651 243776951 -9479632 + L1ME3A LINE L1 5555 5849 -313 532 43 43 0 chr2 243776951 243777021 -9479562 + U6 snRNA snRNA 1 73 -34 685 231 67 152 chr2 243777021 243777282 -9479301 + L1ME3A LINE L1 5849 6131 -31 198 194 0 0 chr2 243777631 243777703 -9478880 + T-rich Low_complexity Low_complexity 1 72 0 187 91 61 0 chr2 243777741 243777774 -9478809 + MIR3 SINE MIR 120 154 -54 2296 74 7 10 chr2 243777971 243778270 -9478313 - AluSp SINE Alu -15 298 1 628 177 0 102 chr2 243778506 243778653 -9477930 + AluJo SINE Alu 43 174 -138 2460 75 10 0 chr2 243778665 243778970 -9477613 - AluY SINE Alu -3 308 1 1735 144 152 39 chr2 243779069 243779450 -9477133 + MSTB LTR MaLR 1 424 -2 1011 212 214 17 chr2 243779533 243779878 -9476705 - MLT1F1 LTR MaLR -41 526 114 2150 100 7 3 chr2 243780538 243780828 -9475755 - AluSg SINE Alu -19 291 1 24 53 0 0 chr2 243781211 243781249 -9475334 + AT_rich Low_complexity Low_complexity 1 38 0 229 324 138 35 chr2 243784306 243784451 -9472132 + MIR3 SINE MIR 45 204 -4 201 309 78 74 chr2 243786329 243786546 -9470037 + L2 LINE L2 2760 2977 -337 713 158 0 60 chr2 243786749 243786882 -9469701 + FLAM_A SINE Alu 2 126 -7 498 176 0 12 chr2 243786895 243786980 -9469603 - FLAM_A SINE Alu -27 115 32 419 317 159 44 chr2 243787644 243788366 -9468217 - L2 LINE L2 -780 2534 1730 662 201 0 30 chr2 243789907 243790041 -9466542 + FLAM_A SINE Alu 1 130 -3 386 318 61 7 chr2 243790070 243790218 -9466365 + MIR SINE MIR 28 183 -79 979 151 39 53 chr2 243790645 243790851 -9465732 - MER46A DNA MER2_type -32 204 2 454 178 99 59 chr2 243790719 243790871 -9465712 + MER46A DNA MER2_type 4 161 -75 * 2136 97 14 7 chr2 243790872 243791161 -9465422 + AluSx SINE Alu 1 291 -21 369 0 0 0 chr2 243791783 243791824 -9464759 + (TG)n Simple_repeat Simple_repeat 2 42 0 4672 153 21 35 chr2 243791834 243791997 -9464586 - L1MD1 LINE L1 -16 6620 6456 2005 159 3 0 chr2 243791997 243792293 -9464290 + AluSx SINE Alu 1 297 -15 4672 153 21 35 chr2 243792293 243793075 -9463508 - L1MD1 LINE L1 -180 6456 5688 1873 138 108 75 chr2 243793092 243793547 -9463036 - L1MB2 LINE L1 -2 6169 5700 1043 137 0 62 chr2 243793547 243793758 -9462825 + AluJo SINE Alu 1 198 -114 973 128 7 13 chr2 243794009 243794158 -9462425 + FRAM SINE Alu 1 146 -30 252 0 0 0 chr2 243794161 243794189 -9462394 + (TAA)n Simple_repeat Simple_repeat 2 29 0 2714 183 28 9 chr2 243794189 243795169 -9461414 - L1MB2 LINE L1 -476 5707 4708 929 197 75 0 chr2 243795169 243795357 -9461226 - AluJo SINE Alu -7 305 104 685 182 0 0 chr2 243795365 243795475 -9461108 + AluJo/FLAM SINE Alu 8 117 -195 1243 180 25 114 chr2 243795478 243795795 -9460788 - AluSx SINE Alu -23 289 1 23 33 0 0 chr2 243795795 243795825 -9460758 + AT_rich Low_complexity Low_complexity 1 30 0 1752 138 76 0 chr2 243795836 243796112 -9460471 + AluJb SINE Alu 1 297 -15 687 140 134 32 chr2 243796123 243796309 -9460274 - L1MA8 LINE L1 -29 6262 6058 4101 203 51 36 chr2 243796329 243797488 -9459095 - L1MB2 LINE L1 -1458 4688 3509 2127 109 31 0 chr2 243797488 243797781 -9458802 - AluSx SINE Alu -10 302 1 4101 203 51 36 chr2 243797781 243797808 -9458775 - L1MB2 LINE L1 -2637 3509 3484 1607 251 40 45 chr2 243797804 243798628 -9457955 - L1MD1 LINE L1 -879 5661 4842 * 2217 110 0 3 chr2 243798785 243799075 -9457508 - AluSx SINE Alu -23 289 1 1252 253 83 24 chr2 243799075 243799256 -9457327 - L1MD1 LINE L1 -3191 3349 3180 804 97 0 0 chr2 243799256 243799370 -9457213 - L1PB1 LINE L1 0 6151 6038 1252 253 83 24 chr2 243799370 243799897 -9456686 - L1MD1 LINE L1 -3360 3180 2599 1127 158 77 32 chr2 243799892 243800138 -9456445 - L1MD1 LINE L1 -6280 260 4 * 231 292 111 0 chr2 243800139 243800211 -9456372 + L2 LINE L2 3234 3313 0 332 349 42 30 chr2 243801178 243801344 -9455239 + L2 LINE L2 2738 2905 -409 1233 176 73 80 chr2 243801521 243801822 -9454761 + AluJo SINE Alu 1 299 -13 805 158 8 15 chr2 243802020 243802153 -9454430 - FLAM_C SINE Alu -1 132 1 235 321 62 0 chr2 243802198 243802279 -9454304 - L2 LINE L2 0 3272 3187 304 238 48 19 chr2 243802322 243802427 -9454156 + MER112 DNA MER1_type 153 260 0 255 125 0 0 chr2 243803198 243803238 -9453345 + (TA)n Simple_repeat Simple_repeat 1 40 0 2166 115 0 0 chr2 243803238 243803525 -9453058 - AluSg SINE Alu -23 287 1 1954 138 3 0 chr2 243804262 243804569 -9452014 - AluSx SINE Alu 0 308 1 733 262 23 28 chr2 243804826 243805040 -9451543 + MER58A DNA MER1_type 1 213 -11 21 36 0 0 chr2 243805766 243805794 -9450789 + AT_rich Low_complexity Low_complexity 1 28 0 289 265 81 62 chr2 243806163 243806339 -9450244 - MIR SINE MIR -62 146 18 1012 173 31 0 chr2 243807136 243807298 -9449285 + FRAM SINE Alu 1 166 -10 1993 124 9 62 chr2 243807466 243807789 -9448794 - AluSx SINE Alu -6 306 1 1253 154 60 118 chr2 243808070 243808164 -9448419 + MER46B DNA MER2_type 1 99 -2632 2154 122 10 0 chr2 243808164 243808468 -9448115 - AluSq SINE Alu -6 307 1 1253 154 60 118 chr2 243808468 243808563 -9448020 + MER46B DNA MER2_type 99 36 -2695 2256 77 0 7 chr2 243808563 243808848 -9447735 + AluSg SINE Alu 1 283 -27 1253 154 60 118 chr2 243808848 243809040 -9447543 + MER46B DNA MER2_type 35 236 0 584 93 93 10 chr2 243809398 243809495 -9447088 - L1MB5 LINE L1 -8 6166 6062 431 253 56 43 chr2 243809537 243809699 -9446884 + MIR SINE MIR 31 194 -68 578 86 35 60 chr2 243810924 243811040 -9445543 - L1MB3 LINE L1 -335 5848 5736 3527 175 53 36 chr2 243811661 243812483 -9444100 - L1MB3 LINE L1 -7 6176 5341 1009 153 10 25 chr2 243812710 243812913 -9443670 - L1MB3 LINE L1 -1150 4996 4797 351 96 0 0 chr2 243812914 243812966 -9443617 - Alu SINE Alu -2 300 249 339 280 64 41 chr2 243812987 243813205 -9443378 - L1ME4a LINE L1 -223 5898 5676 203 179 0 0 chr2 243813244 243813283 -9443300 + T-rich Low_complexity Low_complexity 1 39 0 238 267 40 0 chr2 243813477 243813552 -9443031 - MER103 DNA DNA -49 117 40 2398 90 3 0 chr2 243814595 243814896 -9441687 - AluY SINE Alu -9 302 1 777 181 79 0 chr2 243814923 243815100 -9441483 - L1 LINE L1 -1159 4987 4797 1813 143 10 14 chr2 243815101 243815395 -9441188 - AluSx SINE Alu -2 310 18 303 202 18 149 chr2 243815395 243815458 -9441125 - L1ME4a LINE L1 -944 5202 5159 1935 143 17 0 chr2 243815458 243815472 -9441111 - AluSx SINE Alu -14 298 286 195 100 0 0 chr2 243815472 243815502 -9441081 + (CTTA)n Simple_repeat Simple_repeat 2 31 0 1935 143 17 0 chr2 243815502 243815780 -9440803 - AluSx SINE Alu -26 286 1 303 202 18 149 chr2 243815780 243815830 -9440753 - L1ME4a LINE L1 -987 5159 5104 2208 236 121 76 chr2 243815854 243816683 -9439900 - L1ME LINE L1 -876 6081 5291 2097 94 11 0 chr2 243816683 243816960 -9439623 + AluSg SINE Alu 1 280 -30 2208 236 121 76 chr2 243816960 243817638 -9438945 - L1ME LINE L1 -1666 5291 4492 1483 190 50 10 chr2 243817638 243817938 -9438645 - AluJo SINE Alu 0 312 1 2208 236 121 76 chr2 243817938 243818068 -9438515 - L1ME LINE L1 -2465 4492 4369 12189 109 28 12 chr2 243818070 243820001 -9436582 + Tigger1 DNA MER2_type 2 1963 -455 6248 35 5 2 chr2 243820009 243820798 -9435785 - L1PA6 LINE L1 -21 6133 5343 1340 67 43 5 chr2 243820798 243821008 -9435575 + L1PA6 LINE L1 5119 5336 -810 1532 107 46 11 chr2 243821008 243821271 -9435312 + Tigger1 DNA MER2_type 1948 2219 -199 1441 84 10 0 chr2 243821264 243821466 -9435117 + Tigger1 DNA MER2_type 961 1164 -1254 * 901 185 28 6 chr2 243821476 243821654 -9434929 + Tigger1 DNA MER2_type 2237 2418 0 1261 254 160 15 chr2 243821654 243822264 -9434319 - L1ME LINE L1 -2588 4369 3627 1851 180 10 3 chr2 243822264 243822569 -9434014 - AluJb SINE Alu -5 307 1 1261 254 160 15 chr2 243822569 243822713 -9433870 - L1ME LINE L1 -3330 3627 3505 231 36 0 0 chr2 243822726 243822754 -9433829 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 955 207 0 17 chr2 243822760 243822934 -9433649 - AluJo SINE Alu -37 275 105 602 118 0 32 chr2 243822935 243823028 -9433555 + HY4 scRNA scRNA 1 90 -3 754 183 0 0 chr2 243823068 243823188 -9433395 - AluJo SINE Alu -192 120 1 785 220 43 112 chr2 243823191 243823636 -9432947 - L1ME LINE L1 -3446 3511 3098 324 251 78 98 chr2 243823642 243823977 -9432606 - L1ME LINE L1 -5401 1546 1219 1519 199 13 16 chr2 243824254 243824565 -9432018 - AluJo SINE Alu -2 310 1 1222 157 0 129 chr2 243824736 243824983 -9431600 - L1MC3 LINE L1 -17 7768 7573 725 181 8 0 chr2 243824983 243825110 -9431473 + FLAM_A SINE Alu 1 128 -5 1222 157 0 129 chr2 243825110 243825194 -9431389 - L1MC3 LINE L1 -212 7573 7480 1625 178 55 14 chr2 243825507 243825625 -9430958 + AluJb SINE Alu 1 113 -199 1041 82 0 0 chr2 243825625 243825783 -9430800 + (TA)n Simple_repeat Simple_repeat 1 158 0 1625 178 55 14 chr2 243825783 243825956 -9430627 + AluJb SINE Alu 113 304 -8 2599 258 82 21 chr2 243825958 243826826 -9429757 - L1ME LINE L1 -5831 1028 108 1811 124 14 18 chr2 243826826 243827109 -9429474 - AluSx SINE Alu -15 297 16 1171 145 43 99 chr2 243827235 243827539 -9429044 - L1MC3 LINE L1 -377 7408 7122 223 261 85 92 chr2 243827641 243827771 -9428812 - L2 LINE L2 -1 3271 3143 319 338 36 18 chr2 243827798 243828020 -9428563 - MLT1L LTR MaLR -8 607 382 24 32 0 0 chr2 243829068 243829099 -9427484 + AT_rich Low_complexity Low_complexity 1 31 0 192 77 0 0 chr2 243829308 243829334 -9427249 + (CAG)n Simple_repeat Simple_repeat 3 28 0 29 0 0 0 chr2 243829446 243829475 -9427108 + AT_rich Low_complexity Low_complexity 1 29 0 1202 161 0 32 chr2 243829475 243829693 -9426890 - AluJb SINE Alu -17 295 85 579 180 164 8 chr2 243830554 243830682 -9425901 + MER5A DNA MER1_type 42 189 0 221 304 0 18 chr2 243830682 243830738 -9425845 - L2 LINE L2 -206 3066 3012 1913 207 80 45 chr2 243830742 243831106 -9425477 - L1ME LINE L1 -4833 2022 1672 2144 162 35 8 chr2 243831106 243831508 -9425075 - L1PB4 LINE L1 -1 6155 5743 1913 207 80 45 chr2 243831508 243832109 -9424474 - L1ME LINE L1 -5183 1672 1039 387 143 14 0 chr2 243832114 243832184 -9424399 + MER75 DNA T2_type 1 71 -443 383 197 0 0 chr2 243832314 243832385 -9424198 - MER75 DNA T2_type -443 71 1 1830 162 48 0 chr2 243832399 243832515 -9424068 + AluJb SINE Alu 1 110 -202 540 120 0 0 chr2 243832515 243832615 -9423968 + (TA)n Simple_repeat Simple_repeat 1 100 0 1830 162 48 0 chr2 243832615 243832788 -9423795 + AluJb SINE Alu 110 304 -8 1106 277 19 7 chr2 243832790 243833097 -9423486 - L1ME LINE L1 -5831 1028 718 253 252 117 29 chr2 243833298 243833401 -9423182 - L1ME LINE L1 -6742 117 6 239 246 117 29 chr2 243833541 243833712 -9422871 + L3 LINE CR1 1097 1282 -295 347 195 24 0 chr2 243833790 243833872 -9422711 + (TATATG)n Simple_repeat Simple_repeat 3 86 0 264 233 185 28 chr2 243834088 243834237 -9422346 - MER5A DNA MER1_type 0 189 1 21 36 0 0 chr2 243834613 243834641 -9421942 + AT_rich Low_complexity Low_complexity 1 28 0 279 0 0 0 chr2 243836071 243836102 -9420481 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 459 265 125 68 chr2 243836102 243836423 -9420160 - L2 LINE L2 -13 3300 2962 2187 95 0 58 chr2 243836834 243837160 -9419423 - AluSx SINE Alu -5 307 1 405 262 47 9 chr2 243837363 243837470 -9419113 - HAL1 LINE L1 -1250 1257 1147 930 165 11 51 chr2 243837505 243837681 -9418902 - AluJo SINE Alu -139 173 5 889 191 0 7 chr2 243837754 243837901 -9418682 - FRAM SINE Alu -30 146 1 667 254 127 49 chr2 243837949 243838679 -9417904 - HAL1 LINE L1 -1451 1056 98 441 0 0 0 chr2 243838679 243838728 -9417855 + (TG)n Simple_repeat Simple_repeat 2 50 0 2396 79 0 16 chr2 243838823 243839127 -9417456 + AluSg SINE Alu 1 299 -11 511 138 0 6 chr2 243839137 243839391 -9417192 + AluSx SINE Alu 1 299 -11 201 74 0 0 chr2 243839627 243839654 -9416929 + (CAG)n Simple_repeat Simple_repeat 1 27 0 225 65 0 0 chr2 243839745 243839776 -9416807 + (CAG)n Simple_repeat Simple_repeat 2 32 0 194 286 0 0 chr2 243840327 243840376 -9416207 + MIR SINE MIR 206 254 -8 916 220 66 12 chr2 243840571 243840812 -9415771 + MIR SINE MIR 2 255 -7 438 237 125 20 chr2 243840880 243841032 -9415551 - MIR SINE MIR -14 248 81 257 310 334 21 chr2 243841422 243842092 -9414491 + L3 LINE CR1 691 1570 -7 501 283 30 67 chr2 243842185 243842454 -9414129 - MIR SINE MIR 0 262 4 276 176 0 0 chr2 243843049 243843117 -9413466 + (CAG)n Simple_repeat Simple_repeat 2 69 0 3261 184 12 30 chr2 243843538 243843909 -9412674 + MER82 DNA MER2_type 5 362 -291 2146 115 11 0 chr2 243843909 243844196 -9412387 + AluSg SINE Alu 11 300 -10 3261 184 12 30 chr2 243844196 243844466 -9412117 + MER82 DNA MER2_type 362 635 -18 2199 110 0 3 chr2 243844718 243845009 -9411574 - AluSg SINE Alu -20 290 1 235 215 131 54 chr2 243846368 243846498 -9410085 - MIR SINE MIR -44 218 79 1278 171 103 4 chr2 243846601 243846835 -9409748 + AluJo SINE Alu 1 257 -55 2319 114 7 0 chr2 243846959 243847265 -9409318 - AluSx SINE Alu -4 308 1 252 291 197 17 chr2 243847370 243847659 -9408924 - L2 LINE L2 -669 2645 2305 2259 94 3 10 chr2 243847809 243848106 -9408477 + AluSx SINE Alu 1 295 -17 37 23 0 0 chr2 243848106 243848150 -9408433 + AT_rich Low_complexity Low_complexity 1 44 0 1595 84 14 5 chr2 243848903 243849118 -9407465 - AluSc SINE Alu -92 217 1 1864 171 0 0 chr2 243849756 243850043 -9406540 + AluJb SINE Alu 1 287 -25 183 80 0 0 chr2 243850043 243850068 -9406515 + (TA)n Simple_repeat Simple_repeat 1 25 0 1845 141 0 4 chr2 243850622 243850892 -9405691 - AluSx SINE Alu -2 310 42 2375 92 3 10 chr2 243851471 243851777 -9404806 - AluY SINE Alu -7 304 1 2066 125 3 10 chr2 243851953 243852250 -9404333 + AluSx SINE Alu 1 295 -17 212 260 0 0 chr2 243852752 243852802 -9403781 + T-rich Low_complexity Low_complexity 1 50 0 741 166 0 50 chr2 243854836 243854975 -9401608 - FLAM_A SINE Alu -1 132 1 1039 245 95 66 chr2 243855086 243855645 -9400938 - MLT1G1 LTR MaLR -19 536 5 768 182 0 0 chr2 243855709 243855841 -9400742 - FLAM_A SINE Alu -1 132 1 21 0 0 0 chr2 243855883 243855904 -9400679 + AT_rich Low_complexity Low_complexity 1 21 0 269 198 36 0 chr2 243855916 243856027 -9400556 + (TA)n Simple_repeat Simple_repeat 2 116 0 649 272 158 49 chr2 243856902 243857351 -9399232 - MLT1J LTR MaLR -13 498 1 2410 97 0 0 chr2 243857597 243857906 -9398677 - AluSx SINE Alu -1 311 3 268 217 0 0 chr2 243858114 243858174 -9398409 + MIR3 SINE MIR 106 165 -43 * 306 285 88 29 chr2 243858167 243858304 -9398279 - MER5B DNA MER1_type -31 147 3 198 0 0 0 chr2 243859123 243859145 -9397438 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 376 268 102 29 chr2 243859151 243859397 -9397186 - L1MC5 LINE L1 -40 7921 7658 387 280 134 38 chr2 243859452 243859691 -9396892 - L1MC5 LINE L1 -389 7572 7311 2653 195 140 24 chr2 243859946 243860274 -9396309 - L1MC4 LINE L1 -1 8041 7752 1872 167 7 7 chr2 243860274 243860568 -9396015 - AluJo SINE Alu -18 294 1 2653 195 140 24 chr2 243860568 243861075 -9395508 - L1MC4 LINE L1 -290 7752 7109 551 131 101 0 chr2 243861078 243861177 -9395406 - AluSx SINE Alu -11 299 191 853 129 9 0 chr2 243861177 243861293 -9395290 - AluSx SINE Alu -195 117 1 1393 225 199 7 chr2 243861358 243861811 -9394772 - L1MC4 LINE L1 -1040 7002 6463 1322 145 0 0 chr2 243862260 243862446 -9394137 - AluSg/x SINE Alu -15 295 110 270 87 0 0 chr2 243862466 243862511 -9394072 - AluSg/x SINE Alu -167 133 95 945 114 0 0 chr2 243862513 243862636 -9393947 - AluSx SINE Alu -190 123 1 457 183 67 8 chr2 243862789 243862909 -9393674 - L1MC4a LINE L1 -1327 6481 6355 678 167 128 26 chr2 243863091 243863247 -9393336 + MER45C DNA AcHobo 91 262 -691 641 335 32 14 chr2 243863271 243863552 -9393031 - HERVL LTR ERVL -3606 2048 1763 1614 143 0 0 chr2 243863715 243863939 -9392644 - AluSx SINE Alu -88 224 1 416 322 49 15 chr2 243864047 243864252 -9392331 - HERVL LTR ERVL -4304 1460 1249 262 289 50 25 chr2 243864529 243864650 -9391933 - HERVL LTR ERVL -4773 991 868 246 298 151 24 chr2 243864941 243865193 -9391390 - L2 LINE L2 -787 2527 2244 272 269 130 9 chr2 243865437 243865545 -9391038 + MER5A DNA MER1_type 65 185 -4 265 281 100 31 chr2 243866923 243867083 -9389500 + MIR SINE MIR 86 256 -6 1210 258 165 6 chr2 243869645 243870177 -9386406 - L1MC4 LINE L1 -1 8041 7425 237 311 0 0 chr2 243870416 243870477 -9386106 + MIR SINE MIR 117 177 -85 2088 104 7 14 chr2 243870587 243870876 -9385707 + AluSx SINE Alu 1 287 -25 1951 155 10 7 chr2 243871724 243872034 -9384549 - AluJo SINE Alu -1 311 1 1741 106 0 0 chr2 243872167 243872385 -9384198 + AluSx SINE Alu 1 218 -94 225 0 0 0 chr2 243873235 243873260 -9383323 + (TG)n Simple_repeat Simple_repeat 1 25 0 427 326 115 25 chr2 243873305 243873675 -9382908 - L1MC4a LINE L1 -1954 5854 5519 221 0 0 33 chr2 243873675 243873705 -9382878 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2030 101 30 4 chr2 243873710 243873978 -9382605 - AluSx SINE Alu -37 275 1 427 326 115 25 chr2 243873978 243874036 -9382547 - L1MC4a LINE L1 -2292 5516 5381 240 266 0 0 chr2 243875888 243876046 -9380537 + (TG)n Simple_repeat Simple_repeat 1 158 0 497 307 0 0 chr2 243876073 243876252 -9380331 + (TG)n Simple_repeat Simple_repeat 1 179 0 * 509 202 0 72 chr2 243876213 243876406 -9380177 + (TGAG)n Simple_repeat Simple_repeat 2 180 0 204 275 0 0 chr2 243876409 243876558 -9380025 + (TG)n Simple_repeat Simple_repeat 1 149 0 203 211 0 51 chr2 243876611 243876767 -9379816 + (TGAG)n Simple_repeat Simple_repeat 4 151 0 206 227 11 34 chr2 243876839 243877015 -9379568 + (TGAG)n Simple_repeat Simple_repeat 4 175 0 423 321 0 0 chr2 243877016 243877184 -9379399 + (TG)n Simple_repeat Simple_repeat 1 168 0 297 285 7 0 chr2 243877435 243877738 -9378845 + (CA)n Simple_repeat Simple_repeat 1 305 0 362 282 38 38 chr2 243877887 243878018 -9378565 + L2 LINE L2 3182 3312 -1 184 316 38 0 chr2 243879230 243879309 -9377274 + MIR SINE MIR 60 141 -67 24 0 0 0 chr2 243879592 243879616 -9376967 + GC_rich Low_complexity Low_complexity 1 24 0 270 333 7 7 chr2 243879632 243879776 -9376807 + (CG)n Simple_repeat Simple_repeat 1 144 0 203 367 0 0 chr2 243881913 243881992 -9374591 - L3 LINE CR1 -543 1034 956 1926 124 35 0 chr2 243884820 243885102 -9371481 - AluSx SINE Alu -20 292 1 242 157 59 20 chr2 243885996 243886047 -9370536 - AluSg/x SINE Alu -51 249 197 188 245 19 0 chr2 243886127 243886180 -9370403 - MIR SINE MIR -89 119 66 399 127 0 0 chr2 243886278 243886341 -9370242 + (CA)n Simple_repeat Simple_repeat 2 64 0 202 244 0 0 chr2 243886931 243886972 -9369611 - L2 LINE L2 -22 3250 3210 * 244 326 14 29 chr2 243886949 243887089 -9369494 - MIR3 SINE MIR -19 189 51 232 291 0 23 chr2 243887542 243887628 -9368955 + (TG)n Simple_repeat Simple_repeat 1 84 0 290 141 11 79 chr2 243889304 243889481 -9367102 + (TG)n Simple_repeat Simple_repeat 1 165 0 308 138 19 62 chr2 243889494 243889654 -9366929 + (TG)n Simple_repeat Simple_repeat 1 153 0 258 295 0 0 chr2 243891443 243891548 -9365035 + (CA)n Simple_repeat Simple_repeat 1 105 0 422 297 16 33 chr2 243891558 243891740 -9364843 + (CATG)n Simple_repeat Simple_repeat 2 180 0 261 243 0 0 chr2 243891746 243891816 -9364767 + (CA)n Simple_repeat Simple_repeat 1 70 0 218 299 116 18 chr2 243893720 243893884 -9362699 + L2 LINE L2 2297 2476 -838 299 263 145 79 chr2 243894078 243894485 -9362098 + L2 LINE L2 2830 3263 -9 311 351 71 0 chr2 243896424 243896578 -9360005 + L1MC5 LINE L1 7617 7781 -180 2517 73 0 3 chr2 243896712 243897014 -9359569 + AluSq SINE Alu 1 301 -12 2384 107 0 0 chr2 243898465 243898763 -9357820 + AluSx SINE Alu 1 298 -14 679 203 85 95 chr2 243899323 243899697 -9356886 + MLT1C LTR MaLR 6 370 -20 309 151 0 0 chr2 243899734 243899787 -9356796 + G-rich Low_complexity Low_complexity 3 55 0 3978 104 27 44 chr2 243900143 243901065 -9355518 + SVA Other Other 209 868 -520 6432 84 39 29 chr2 243901083 243902052 -9354531 + SVA Other Other 433 1411 0 286 289 118 60 chr2 243902572 243902675 -9353908 - L1ME4a LINE L1 -213 5908 5812 2190 131 0 3 chr2 243902675 243902987 -9353596 + AluSx SINE Alu 1 311 -1 286 289 118 60 chr2 243902987 243903402 -9353181 - L1ME4a LINE L1 -309 5812 5360 736 191 0 7 chr2 243903411 243903552 -9353031 - FLAM_C SINE Alu -2 141 2 207 196 0 0 chr2 243903563 243903609 -9352974 + T-rich Low_complexity Low_complexity 1 46 0 276 314 135 38 chr2 243903735 243904336 -9352247 - L1ME4a LINE L1 -1800 4346 3688 930 222 57 99 chr2 243904403 243904890 -9351693 - L1ME1 LINE L1 -4 6162 5724 619 206 63 0 chr2 243904890 243905016 -9351567 + MER20 DNA MER1_type 3 136 -83 1267 163 87 76 chr2 243905016 243905292 -9351291 - MER1B DNA MER1_type 0 339 61 385 240 78 23 chr2 243905296 243905425 -9351158 + MER20 DNA MER1_type 80 215 -4 9788 230 53 17 chr2 243905441 243908415 -9348168 - L1ME1 LINE L1 -765 5381 2549 2161 102 3 3 chr2 243908487 243908798 -9347785 + AluY SINE Alu 1 311 0 1100 186 62 0 chr2 243908892 243909102 -9347481 + MER58A DNA MER1_type 2 224 0 542 224 130 6 chr2 243909111 243909272 -9347311 - MER3 DNA MER1_type -1 208 28 1911 167 16 0 chr2 243909273 243909578 -9347005 + AluSx SINE Alu 2 311 -1 2444 96 0 0 chr2 243909585 243909887 -9346696 + AluSg SINE Alu 1 302 -8 418 252 28 42 chr2 243910248 243910391 -9346192 - MER33 DNA MER1_type -183 141 1 2244 114 10 0 chr2 243910540 243910839 -9345744 - AluSx SINE Alu -10 302 1 757 221 105 0 chr2 243911071 243911261 -9345322 - MIR SINE MIR -29 233 24 613 297 62 11 chr2 243911290 243911686 -9344897 + L1MC/D LINE L1 5217 5639 -748 1382 111 0 5 chr2 243912315 243912504 -9344079 - AluSg/x SINE Alu -10 302 115 2015 120 6 65 chr2 243912615 243912795 -9343788 - AluSx SINE Alu -6 306 117 186 43 0 0 chr2 243912795 243912818 -9343765 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2091 108 3 18 chr2 243912818 243913104 -9343479 - AluSx SINE Alu -30 282 1 2015 120 6 65 chr2 243913104 243913247 -9343336 - AluSx SINE Alu -193 119 1 2306 91 20 0 chr2 243913475 243913773 -9342810 - AluSg SINE Alu -6 304 1 243 88 0 0 chr2 243915279 243915313 -9341270 + (TCC)n Simple_repeat Simple_repeat 1 34 0 1529 159 3 96 chr2 243916291 243916624 -9339959 - AluJo SINE Alu -10 302 1 191 321 54 0 chr2 243917552 243917608 -9338975 + L2 LINE L2 3246 3304 -9 2454 94 0 0 chr2 243917633 243917960 -9338623 + AluSq SINE Alu 1 313 0 2005 121 7 0 chr2 243918299 243918571 -9338012 + AluSq SINE Alu 1 274 -39 498 273 85 18 chr2 243918572 243918639 -9337944 + MLT1L LTR MaLR 155 216 -295 1579 175 5 92 chr2 243918639 243918800 -9337783 + MLT1A1 LTR MaLR 1 175 -190 2275 100 0 0 chr2 243918800 243919080 -9337503 + AluSx SINE Alu 1 280 -32 189 0 0 0 chr2 243919084 243919105 -9337478 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1579 175 5 92 chr2 243919105 243919338 -9337245 + MLT1A1 LTR MaLR 178 365 0 498 273 85 18 chr2 243919338 243919522 -9337061 + MLT1L LTR MaLR 216 346 -165 439 207 63 9 chr2 243919531 243919642 -9336941 + MLT1L LTR MaLR 481 597 -18 180 0 0 0 chr2 243920712 243920732 -9335851 + (CCA)n Simple_repeat Simple_repeat 2 21 0 22 35 0 0 chr2 243922171 243922200 -9334383 + GC_rich Low_complexity Low_complexity 1 29 0 265 197 14 0 chr2 243922844 243922915 -9333668 + G-rich Low_complexity Low_complexity 3 74 0 35 78 0 0 chr2 243923057 243923134 -9333449 + GC_rich Low_complexity Low_complexity 1 77 0 26 0 0 0 chr2 243923619 243923645 -9332938 + GC_rich Low_complexity Low_complexity 1 26 0 265 197 14 0 chr2 243923771 243923842 -9332741 + G-rich Low_complexity Low_complexity 3 74 0 212 132 19 38 chr2 243923974 243924027 -9332556 + G-rich Low_complexity Low_complexity 2 53 0 1310 188 15 116 chr2 243925483 243925529 -9331054 - MLT1A1 LTR MaLR -2 363 314 2139 107 59 34 chr2 243925529 243925884 -9330699 + THE1B LTR MaLR 1 364 0 1310 188 15 116 chr2 243925884 243926078 -9330505 - MLT1A1 LTR MaLR -51 314 178 2132 96 0 73 chr2 243926078 243926392 -9330191 - AluSg SINE Alu -19 291 1 1310 188 15 116 chr2 243926392 243926554 -9330029 - MLT1A1 LTR MaLR -187 178 1 2067 182 2 71 chr2 243926559 243927021 -9329562 - MLT1A1-int LTR MaLR -6 1729 1300 1174 199 33 28 chr2 243927124 243927501 -9329082 + MLT1-int LTR MaLR 423 890 -481 275 239 15 0 chr2 243927557 243927624 -9328959 + MLT-int LTR MaLR 677 744 -991 * 1568 185 96 27 chr2 243927616 243927911 -9328672 - MLT1A1-int LTR MaLR -896 475 143 2367 105 0 7 chr2 243927911 243928216 -9328367 - AluSg SINE Alu -7 303 1 1568 185 96 27 chr2 243928216 243928326 -9328257 - MLT1A1-int LTR MaLR -1228 143 42 1103 195 58 72 chr2 243928339 243928573 -9328010 - MLT1A1 LTR MaLR -2 426 123 2255 100 0 17 chr2 243928573 243928903 -9327680 + AluSq SINE Alu 1 325 0 1103 195 58 72 chr2 243928903 243929025 -9327558 - MLT1A1 LTR MaLR -305 123 1 2392 103 0 3 chr2 243929713 243930023 -9326560 + AluSc SINE Alu 1 309 0 186 146 18 127 chr2 243930431 243930472 -9326111 + L2 LINE L2 3265 3300 -13 1904 172 0 16 chr2 243930472 243930786 -9325797 + AluJb SINE Alu 1 309 -3 186 146 18 127 chr2 243930786 243930799 -9325784 + L2 LINE L2 3300 3313 0 267 290 53 76 chr2 243930998 243931088 -9325495 - MIR3 SINE MIR -24 184 96 2264 127 0 0 chr2 243931088 243931388 -9325195 + AluSx SINE Alu 2 301 -11 267 290 53 76 chr2 243931388 243931428 -9325155 - MIR3 SINE MIR -112 96 57 2093 231 67 16 chr2 243932114 243932657 -9323926 + MER77 LTR ERV1 54 601 -4 2246 125 6 0 chr2 243932708 243933019 -9323564 - AluSq SINE Alu 0 313 1 187 320 107 8 chr2 243933266 243933388 -9323195 + L2 LINE L2 3088 3221 -51 785 118 7 83 chr2 243934363 243934507 -9322076 + FLAM_C SINE Alu 1 133 0 2340 90 20 0 chr2 243934650 243934951 -9321632 + AluSq SINE Alu 1 307 -6 2372 98 3 0 chr2 243935467 243935764 -9320819 + AluSx SINE Alu 1 298 -14 932 272 78 36 chr2 243936120 243936638 -9319945 + L1ME4a LINE L1 5512 6058 -63 5243 62 6 7 chr2 243936638 243937329 -9319254 - LTR8 LTR ERV1 -1 690 1 932 272 78 36 chr2 243937329 243937388 -9319195 + L1ME4a LINE L1 6058 6113 -8 1493 57 17 0 chr2 243938361 243938538 -9318045 + AluSg SINE Alu 16 195 -115 213 121 0 0 chr2 243938544 243938577 -9318006 + (A)n Simple_repeat Simple_repeat 1 33 0 195 42 0 0 chr2 243938652 243938676 -9317907 + (T)n Simple_repeat Simple_repeat 1 24 0 1561 125 0 0 chr2 243939109 243939351 -9317232 + AluSg/x SINE Alu 85 326 0 686 143 18 9 chr2 243939468 243939580 -9317003 + MER2 DNA MER2_type 2 114 -231 1234 97 0 0 chr2 243939619 243939773 -9316810 - AluSx SINE Alu -157 155 2 392 260 276 14 chr2 243939803 243940037 -9316546 - L1ME2 LINE L1 0 6164 5873 566 237 75 17 chr2 243940097 243940270 -9316313 - MER5A DNA MER1_type 0 189 7 243 277 31 15 chr2 243940783 243940848 -9315735 - L2 LINE L2 -211 3061 2996 2436 112 0 0 chr2 243940851 243941163 -9315420 + AluSx SINE Alu 1 312 0 522 224 35 91 chr2 243941260 243941403 -9315180 - MIR SINE MIR -103 159 25 590 175 17 0 chr2 243941428 243941548 -9315035 - Charlie5 DNA MER1_type -30 2582 2461 243 277 31 15 chr2 243941877 243941942 -9314641 - L2 LINE L2 -211 3061 2996 2222 144 0 0 chr2 243941945 243942257 -9314326 + AluSx SINE Alu 1 312 0 509 266 0 56 chr2 243942354 243942497 -9314086 - MIR SINE MIR -103 159 25 1859 177 8 21 chr2 243942520 243942909 -9313674 - Charlie5 DNA MER1_type 0 2623 2240 521 193 118 0 chr2 243942923 243943042 -9313541 - MER3 DNA MER1_type -41 168 36 2296 100 0 13 chr2 243943299 243943599 -9312984 - AluSx SINE Alu -16 296 1 437 263 86 51 chr2 243943882 243944137 -9312446 + LTR37B LTR ERV1 56 319 -149 266 224 17 0 chr2 243944264 243944322 -9312261 + MLT1B LTR MaLR 332 390 0 425 248 0 11 chr2 243946030 243946314 -9310269 + (TG)n Simple_repeat Simple_repeat 1 280 0 204 302 0 0 chr2 243946394 243946520 -9310063 + (TG)n Simple_repeat Simple_repeat 2 127 0 566 221 0 6 chr2 243946541 243946872 -9309711 + (TG)n Simple_repeat Simple_repeat 1 329 0 1020 231 30 88 chr2 243946961 243947313 -9309270 - MLT1C LTR MaLR 0 467 145 2202 133 0 0 chr2 243947313 243947607 -9308976 - AluSx SINE Alu -18 294 1 1020 231 30 88 chr2 243947607 243947695 -9308888 - MLT1C LTR MaLR -322 145 53 2446 252 53 22 chr2 243947714 243948127 -9308456 + L1ME3 LINE L1 5344 5792 -370 2516 72 0 16 chr2 243948127 243948445 -9308138 + AluSq SINE Alu 1 313 0 2446 252 53 22 chr2 243948445 243948790 -9307793 + L1ME3 LINE L1 5792 6125 -37 904 91 0 0 chr2 243948794 243948904 -9307679 + AluSg SINE Alu 2 111 -199 1015 89 0 0 chr2 243949004 243949128 -9307455 - AluSq/x SINE Alu -188 124 1 550 300 40 24 chr2 243949212 243949509 -9307074 - L1MC4 LINE L1 -10 8032 7731 972 136 7 19 chr2 243949509 243949663 -9306920 + AluSg/x SINE Alu 137 288 -24 333 0 0 0 chr2 243949679 243949716 -9306867 + (CA)n Simple_repeat Simple_repeat 2 38 0 425 181 24 0 chr2 243949836 243949919 -9306664 + L1MA4A LINE L1 6196 6280 -23 369 274 56 16 chr2 243949917 243950119 -9306464 - L1MC4 LINE L1 -372 7670 7477 * 1850 139 47 78 chr2 243950119 243950506 -9306077 - THE1C LTR MaLR 0 375 1 369 274 56 16 chr2 243950506 243951329 -9305254 - L1MC4 LINE L1 -565 7477 6688 2591 99 3 11 chr2 243951423 243951795 -9304788 - L1PB1 LINE L1 -1 6150 5782 209 138 52 17 chr2 243951795 243951853 -9304730 + (TA)n Simple_repeat Simple_repeat 1 60 0 552 98 130 24 chr2 243951853 243951976 -9304607 - L1PB1 LINE L1 -360 5791 5656 * 603 271 147 56 chr2 243951971 243952095 -9304488 - L1MC4a LINE L1 -1304 6504 6393 1583 186 88 66 chr2 243952095 243952552 -9304031 - MLT1C LTR MaLR 0 467 1 603 271 147 56 chr2 243952552 243952813 -9303770 - L1MC4a LINE L1 -1415 6393 6157 2122 125 0 0 chr2 243952813 243953101 -9303482 + AluSx SINE Alu 1 288 -24 324 0 0 0 chr2 243953102 243953138 -9303445 + (TA)n Simple_repeat Simple_repeat 2 37 0 603 271 147 56 chr2 243953138 243953395 -9303188 - L1MC4a LINE L1 -1650 6158 5800 193 326 11 54 chr2 243955020 243955112 -9301471 - L3 LINE CR1 -520 1057 970 479 293 78 26 chr2 243955173 243955405 -9301178 - MIR SINE MIR -17 245 2 257 184 132 26 chr2 243956972 243957086 -9299497 + LTR16A LTR ERVL 238 363 -87 2223 92 37 0 chr2 243957789 243958083 -9298500 - AluSp SINE Alu -8 305 1 1935 168 0 0 chr2 243958385 243958688 -9297895 + AluJb SINE Alu 1 303 -9 279 173 0 0 chr2 243958690 243958742 -9297841 - L1MB7 LINE L1 -22 6162 6111 611 108 0 0 chr2 243958742 243958825 -9297758 + AluS SINE Alu 2 84 -228 698 148 8 16 chr2 243958825 243958947 -9297636 - L1MB7 LINE L1 -60 6124 6004 297 91 0 0 chr2 243958947 243958991 -9297592 - MER4E LTR ERV1 0 766 723 207 0 0 0 chr2 243958991 243959014 -9297569 + (CTATA)n Simple_repeat Simple_repeat 2 24 0 3394 225 92 23 chr2 243959133 243959319 -9297264 + L1ME3 LINE L1 4389 4561 -1601 531 112 75 28 chr2 243959319 243959426 -9297157 - L1MA8 LINE L1 -2 6289 6178 3394 225 92 23 chr2 243959426 243959990 -9296593 + L1ME3 LINE L1 4561 5085 -1077 2298 102 3 0 chr2 243959990 243960285 -9296298 + AluSx SINE Alu 1 296 -16 3394 225 92 23 chr2 243960285 243960869 -9295714 + L1ME3 LINE L1 5085 5851 -311 2138 131 20 3 chr2 243960869 243961175 -9295408 + AluSx SINE Alu 1 311 -1 3394 225 92 23 chr2 243961175 243961506 -9295077 + L1ME3 LINE L1 5851 6158 -4 2241 147 86 13 chr2 243963456 243963781 -9292802 + MSTA LTR MaLR 4 365 -63 1845 154 0 0 chr2 243963781 243964060 -9292523 - AluSx SINE Alu 0 312 34 2241 147 86 13 chr2 243964060 243964130 -9292453 + MSTA LTR MaLR 365 428 0 261 0 0 0 chr2 243964165 243964194 -9292389 + (TG)n Simple_repeat Simple_repeat 1 29 0 270 304 10 20 chr2 243964351 243964453 -9292130 + L1ME LINE L1 5635 5735 -386 709 227 110 102 chr2 243964464 243964552 -9292031 + MLT1J LTR MaLR 6 92 -419 2354 99 3 0 chr2 243964552 243964846 -9291737 - AluSp SINE Alu -18 295 1 2005 134 7 3 chr2 243964856 243965163 -9291420 - AluSx SINE Alu 0 308 1 709 227 110 102 chr2 243965163 243965564 -9291019 + MLT1J LTR MaLR 100 511 0 1962 151 3 13 chr2 243965722 243966021 -9290562 - AluJb SINE Alu -16 296 1 618 253 5 86 chr2 243966083 243966281 -9290302 + MIR SINE MIR 33 214 -48 1641 181 92 8 chr2 243966803 243966864 -9289719 - MLT1D LTR MaLR 0 505 451 2184 136 3 0 chr2 243966864 243967174 -9289409 + AluSx SINE Alu 1 311 -1 1641 181 92 8 chr2 243967174 243967482 -9289101 - MLT1D LTR MaLR -54 451 105 281 300 57 14 chr2 243967797 243967937 -9288646 + MER117 DNA MER1_type 1 146 -51 826 140 0 35 chr2 243968002 243968145 -9288438 - L1PB4 LINE L1 0 6156 6019 221 301 0 0 chr2 243968223 243968296 -9288287 + GA-rich Low_complexity Low_complexity 5 77 0 284 238 191 32 chr2 243970044 243970170 -9286413 - MER5A DNA MER1_type -26 163 18 1970 123 25 0 chr2 243970308 243970584 -9285999 - AluJo SINE Alu -29 283 1 2165 110 36 3 chr2 243970947 243971248 -9285335 - AluSx SINE Alu -1 311 1 280 125 21 0 chr2 243971248 243971296 -9285287 - AluSq/x SINE Alu -167 135 87 489 183 10 29 chr2 243972093 243972197 -9284386 + MLT1A2 LTR MaLR 1 102 -272 1943 87 0 12 chr2 243972197 243972451 -9284132 - AluY SINE Alu -7 304 54 228 285 32 81 chr2 243973393 243973516 -9283067 + MIR SINE MIR 36 152 -56 303 230 27 0 chr2 243973606 243973680 -9282903 + MER116 DNA Mariner 5 80 0 460 292 83 12 chr2 243973827 243973995 -9282588 - MIR3 SINE MIR -28 180 1 364 244 23 0 chr2 243974184 243974270 -9282313 + MIR SINE MIR 119 206 -56 2184 113 0 0 chr2 243974389 243974697 -9281886 - AluSx SINE Alu 0 308 1 427 267 8 17 chr2 243975105 243975225 -9281358 + L2 LINE L2 3193 3311 -2 2126 120 7 0 chr2 243975261 243975552 -9281031 + AluSq SINE Alu 1 293 -20 207 360 32 24 chr2 243975769 243975894 -9280689 + L2 LINE L2 2654 2779 -535 2138 184 0 24 chr2 243975899 243976324 -9280259 + L1MB7 LINE L1 5368 5782 -396 1296 112 0 0 chr2 243976326 243976495 -9280088 + AluSg/x SINE Alu 131 299 -11 852 198 45 0 chr2 243976496 243976653 -9279930 - MLT1A1 LTR MaLR 0 365 202 1613 160 257 20 chr2 243976666 243977109 -9279474 - LTR10A LTR ERV1 -61 548 1 577 232 173 12 chr2 243977143 243977311 -9279272 - MLT1A1 LTR MaLR -169 196 2 1110 192 13 4 chr2 243977311 243977540 -9279043 + L1MB7 LINE L1 5777 6007 -177 3432 126 55 47 chr2 243977540 243977736 -9278847 + MER4D LTR ERV1 1 194 -709 2100 96 60 4 chr2 243977736 243978017 -9278566 - AluSx SINE Alu -15 297 1 3432 126 55 47 chr2 243978017 243978364 -9278219 + MER4D LTR ERV1 194 552 -351 2440 59 3 0 chr2 243978364 243978654 -9277929 - AluY SINE Alu -20 291 1 3432 126 55 47 chr2 243978654 243978766 -9277817 + MER4D LTR ERV1 552 662 -241 226 319 92 71 chr2 243978983 243979278 -9277305 + L2 LINE L2 2564 2864 -450 348 24 0 0 chr2 243979289 243979330 -9277253 + (CA)n Simple_repeat Simple_repeat 1 41 0 394 226 28 47 chr2 243979848 243979954 -9276629 - MIR SINE MIR 0 262 159 2265 131 33 48 chr2 243980889 243981191 -9275392 - MLT1B LTR MaLR 0 390 93 2067 128 3 3 chr2 243981191 243981496 -9275087 + AluSx SINE Alu 1 305 0 2265 131 33 48 chr2 243981496 243981588 -9274995 - MLT1B LTR MaLR -297 93 1 579 294 36 5 chr2 243981606 243981800 -9274783 + MIR SINE MIR 48 247 -15 2271 98 0 7 chr2 243981885 243982172 -9274411 + AluSx SINE Alu 1 285 -27 781 61 0 35 chr2 243982218 243982333 -9274250 - L1P LINE L1 -2076 4070 3960 4047 36 0 0 chr2 243982333 243982783 -9273800 + L1PA5 LINE L1 5684 6154 0 362 292 138 12 chr2 243982790 243983112 -9273471 + L1MEd LINE L1 991 1344 -4785 2093 131 3 0 chr2 243983747 243984062 -9272521 - AluSx SINE Alu 0 319 4 416 306 8 24 chr2 243984823 243984947 -9271636 - L2 LINE L2 0 3313 3192 2298 97 0 3 chr2 243984953 243985252 -9271331 - AluSg SINE Alu -12 298 1 332 292 38 30 chr2 243985261 243985410 -9271173 - MIR SINE MIR -61 147 1 1865 160 20 0 chr2 243986871 243987171 -9269412 + AluSx SINE Alu 1 306 -6 359 273 73 37 chr2 243987680 243987841 -9268742 - L1MC4a LINE L1 -1902 5906 5752 1996 122 0 0 chr2 243987841 243988112 -9268471 - AluSx SINE Alu -5 307 37 359 273 73 37 chr2 243988112 243988250 -9268333 - L1MC4a LINE L1 -2056 5752 5538 207 0 0 0 chr2 243989034 243989057 -9267526 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1344 228 79 14 chr2 243989587 243989943 -9266640 - MLT1B LTR MaLR 0 390 12 189 245 41 0 chr2 243989955 243990004 -9266579 + L2 LINE L2 3262 3312 -1 * 626 267 101 10 chr2 243990001 243990218 -9266365 - MIR SINE MIR 0 262 34 1970 146 4 0 chr2 243990592 243990905 -9265678 + AluSx SINE Alu 1 314 0 2248 104 17 0 chr2 243992842 243993139 -9263444 - AluSx SINE Alu -10 302 1 233 204 0 0 chr2 243993139 243993188 -9263395 - L1MB3 LINE L1 -41 6142 6094 886 174 12 31 chr2 243993201 243993402 -9263181 - L1MA4 LINE L1 -205 5946 5812 636 114 105 18 chr2 243993409 243993523 -9263060 - FLAM_A SINE Alu -8 125 2 796 188 0 0 chr2 243993559 243993692 -9262891 + FLAM_C SINE Alu 1 133 0 1930 144 18 0 chr2 243993950 243994235 -9262348 - AluSq SINE Alu -23 290 1 732 208 39 0 chr2 243995653 243995783 -9260800 - FRAM SINE Alu -30 146 12 225 94 0 0 chr2 243996113 243996145 -9260438 + (GA)n Simple_repeat Simple_repeat 1 32 0 841 180 41 6 chr2 243996652 243996824 -9259759 + MER45A DNA AcHobo 1 178 0 21 0 0 0 chr2 243997071 243997092 -9259491 + AT_rich Low_complexity Low_complexity 1 21 0 197 392 25 0 chr2 243997638 243997717 -9258866 - L3 LINE CR1 -89 1488 1408 378 0 0 0 chr2 243997717 243997759 -9258824 + (TTA)n Simple_repeat Simple_repeat 2 43 0 678 309 55 0 chr2 243997764 243997984 -9258599 - MIR SINE MIR -2 260 29 1276 223 124 9 chr2 243998050 243998486 -9258097 - MLT1E LTR MaLR 0 593 108 292 228 12 8 chr2 243998586 243998678 -9257905 - L1M4 LINE L1 -1785 4361 4271 2050 124 0 40 chr2 243998678 243998977 -9257606 - AluSx SINE Alu -25 287 1 292 228 12 8 chr2 243998977 243999099 -9257484 - L1M4 LINE L1 -1875 4271 4074 2190 69 0 14 chr2 243999474 243999749 -9256834 + AluY SINE Alu 39 309 -2 2297 100 3 0 chr2 244000344 244000635 -9255948 - AluSq SINE Alu -21 292 1 197 314 12 23 chr2 244000653 244000739 -9255844 - MIR SINE MIR -104 104 20 2416 79 3 0 chr2 244001361 244001652 -9254931 + AluSp SINE Alu 9 300 -13 1518 211 107 42 chr2 244001906 244002474 -9254109 + L1MC5 LINE L1 7313 7917 -44 23 33 0 0 chr2 244002480 244002510 -9254073 + AT_rich Low_complexity Low_complexity 1 30 0 226 250 98 71 chr2 244002650 244002762 -9253821 + L2 LINE L2 3158 3272 0 221 203 0 78 chr2 244003585 244003609 -9252974 + (TAA)n Simple_repeat Simple_repeat 1 25 -34 2238 115 0 0 chr2 244003609 244003904 -9252679 + AluSx SINE Alu 1 295 -17 221 203 0 78 chr2 244003904 244003943 -9252640 + (TAA)n Simple_repeat Simple_repeat 25 59 0 2218 92 3 55 chr2 244004423 244004748 -9251835 - AluSx SINE Alu -4 308 1 208 299 0 45 chr2 244005068 244005135 -9251448 + MIR SINE MIR 85 148 -60 423 239 8 8 chr2 244005289 244005406 -9251177 + L1MC4 LINE L1 7464 7580 -462 2135 105 18 0 chr2 244005425 244005701 -9250882 + AluSx SINE Alu 11 291 -21 859 268 76 13 chr2 244005718 244006020 -9250563 + L1MC4 LINE L1 7578 7898 -144 460 294 44 0 chr2 244006143 244006279 -9250304 + MIR SINE MIR 86 227 -35 296 260 84 136 chr2 244006325 244006490 -9250093 + L2 LINE L2 2919 3060 -212 2533 70 0 0 chr2 244006490 244006790 -9249793 - AluY SINE Alu -11 300 1 296 260 84 136 chr2 244006790 244006947 -9249636 + L2 LINE L2 3060 3224 -48 291 232 81 30 chr2 244007038 244007137 -9249446 - MER91C DNA MER1_type -36 104 1 21 0 0 0 chr2 244007714 244007735 -9248848 + AT_rich Low_complexity Low_complexity 1 21 0 246 128 0 0 chr2 244007854 244007893 -9248690 + (TTTC)n Simple_repeat Simple_repeat 1 39 0 2293 123 0 0 chr2 244007903 244008213 -9248370 - AluSg SINE Alu 0 310 1 1992 119 6 16 chr2 244008237 244008549 -9248034 - AluSq SINE Alu -4 309 1 190 318 136 11 chr2 244008855 244008943 -9247640 + MIR SINE MIR 158 256 -6 399 281 146 37 chr2 244010971 244011123 -9245460 + L1ME LINE L1 5319 5453 -668 2323 106 0 0 chr2 244011123 244011424 -9245159 + AluSq SINE Alu 1 301 -12 399 281 146 37 chr2 244011424 244011457 -9245126 + L1ME LINE L1 5453 5481 -640 2302 87 7 7 chr2 244011457 244011756 -9244827 + AluSp SINE Alu 1 299 -14 399 281 146 37 chr2 244011756 244011897 -9244686 + L1ME LINE L1 5481 5682 -439 574 210 0 40 chr2 244011926 244012050 -9244533 - L2 LINE L2 -1 3312 3194 333 204 194 0 chr2 244013125 244013218 -9243365 + MER5B DNA MER1_type 66 176 -2 306 318 138 53 chr2 244013566 244014173 -9242410 + L2 LINE L2 2228 2886 -428 487 235 70 9 chr2 244014199 244014314 -9242269 - L2 LINE L2 0 3313 3192 902 228 60 34 chr2 244014393 244014631 -9241952 + MIR SINE MIR 9 248 -14 1835 195 7 0 chr2 244014633 244014936 -9241647 - AluJo SINE Alu -3 309 5 214 256 61 85 chr2 244014943 244015025 -9241558 + L2 LINE L2 3192 3271 -1 306 313 31 34 chr2 244015373 244015503 -9241080 + MIR3 SINE MIR 68 202 -6 432 287 135 8 chr2 244015735 244015979 -9240604 + L1ME4a LINE L1 5603 5877 -244 315 350 58 0 chr2 244016770 244016890 -9239693 + MIR3 SINE MIR 60 186 -22 235 219 12 12 chr2 244017396 244017478 -9239105 + (TG)n Simple_repeat Simple_repeat 1 82 0 631 106 11 21 chr2 244017842 244017936 -9238647 + AluSg/x SINE Alu 180 272 -38 283 275 56 78 chr2 244018608 244018750 -9237833 + MER5A DNA MER1_type 1 139 -50 * 607 152 16 64 chr2 244018626 244018751 -9237832 - MER5A DNA MER1_type -10 179 61 660 234 0 0 chr2 244018754 244018878 -9237705 + FLAM_A SINE Alu 3 126 -7 326 318 167 16 chr2 244019061 244019319 -9237264 + L2 LINE L2 3011 3307 -6 2241 100 0 31 chr2 244019866 244020185 -9236398 - AluSq SINE Alu -4 309 1 2065 183 65 37 chr2 244020796 244021287 -9235296 - MLT1D LTR MaLR 0 505 1 1518 136 0 23 chr2 244022169 244022427 -9234156 + L1MD3 LINE L1 7744 7995 0 1754 169 23 19 chr2 244022436 244022744 -9233839 + AluJb SINE Alu 1 309 -3 239 108 27 0 chr2 244022745 244022782 -9233801 + AluSx SINE Alu 1 38 -264 670 236 128 47 chr2 244022882 244023178 -9233405 + MLT1H LTR MaLR 230 549 0 187 281 0 18 chr2 244023409 244023466 -9233117 - L2 LINE L2 -1 3312 3257 265 228 0 0 chr2 244024891 244024948 -9231635 + MER94 DNA DNA 1 57 -77 2090 112 0 0 chr2 244025255 244025524 -9231059 + AluSx SINE Alu 21 289 -23 238 296 62 62 chr2 244026049 244026228 -9230355 + MIR3 SINE MIR 5 183 -25 261 286 129 14 chr2 244026632 244026779 -9229804 + L3 LINE CR1 1308 1471 -106 2088 111 23 7 chr2 244027554 244027860 -9228723 + AluSx SINE Alu 1 311 -1 396 223 36 22 chr2 244027884 244028023 -9228560 - L1ME1 LINE L1 -62 6104 5964 844 144 72 61 chr2 244028069 244028250 -9228333 - AluJb SINE Alu -45 267 85 355 235 154 56 chr2 244028377 244028539 -9228044 + MIR3 SINE MIR 23 200 -8 351 0 0 0 chr2 244028674 244028713 -9227870 + (CA)n Simple_repeat Simple_repeat 2 40 0 190 292 192 0 chr2 244029055 244029175 -9227408 + L2 LINE L2 3159 3301 -12 371 368 18 0 chr2 244029203 244029366 -9227217 - MIR SINE MIR -61 201 36 215 224 290 9 chr2 244029736 244029809 -9226774 - MER5A DNA MER1_type -27 162 111 2023 139 10 3 chr2 244029809 244030103 -9226480 - AluSx SINE Alu -4 308 13 215 224 290 9 chr2 244030103 244030136 -9226447 - MER5A DNA MER1_type -78 111 26 3429 156 23 75 chr2 244030468 244031197 -9225386 + LTR8 LTR ERV1 1 691 0 2331 97 0 0 chr2 244031839 244032129 -9224454 - AluSq SINE Alu -22 291 2 230 327 67 36 chr2 244033069 244033253 -9223330 - MIR3 SINE MIR -57 205 14 1679 176 3 27 chr2 244033413 244033708 -9222875 - AluJo SINE Alu -24 288 1 2260 105 3 37 chr2 244034651 244034787 -9221796 + AluSq SINE Alu 1 140 -173 2282 93 6 16 chr2 244034787 244035098 -9221485 + AluY SINE Alu 1 308 -3 2260 105 3 37 chr2 244035098 244035284 -9221299 + AluSq SINE Alu 140 312 -1 3639 161 38 19 chr2 244035391 244036214 -9220369 + L1MA9 LINE L1 5352 6290 -22 2242 123 0 3 chr2 244036334 244036634 -9219949 - AluSx SINE Alu -13 299 1 426 20 0 0 chr2 244037353 244037404 -9219179 + (TG)n Simple_repeat Simple_repeat 1 51 0 947 286 38 75 chr2 244037624 244038263 -9218320 + L1MC4a LINE L1 5319 5933 -1875 2333 95 3 0 chr2 244038482 244038792 -9217791 + AluSx SINE Alu 1 311 0 558 279 148 47 chr2 244039154 244039519 -9217064 + L1M4 LINE L1 3886 4287 -1859 684 293 119 46 chr2 244039544 244040069 -9216514 + L1M4 LINE L1 4333 4894 -1252 6565 198 37 24 chr2 244040074 244041589 -9214994 + L1M4 LINE L1 3664 5204 -942 1757 175 32 19 chr2 244041589 244041897 -9214686 + AluSx SINE Alu 1 312 0 6565 198 37 24 chr2 244041897 244042021 -9214562 + L1M4 LINE L1 5204 5325 -821 1939 158 0 0 chr2 244042021 244042305 -9214278 + AluJb SINE Alu 1 284 -28 216 228 0 0 chr2 244042306 244042363 -9214220 + (CATATA)n Simple_repeat Simple_repeat 3 59 0 1007 292 19 19 chr2 244242375 244242841 -9013742 + L1M4 LINE L1 3150 3615 -2531 * 1708 63 8 12 chr2 244242831 244243083 -9013500 + L1P LINE L1 1 251 -5895 2397 93 71 42 chr2 244243183 244243243 -9013340 - THE1B-int LTR MaLR -1160 420 363 2347 98 3 0 chr2 244243243 244243540 -9013043 + AluSg SINE Alu 1 298 -12 2397 93 71 42 chr2 244243540 244243887 -9012696 - THE1B-int LTR MaLR -1217 363 1 1916 129 44 41 chr2 244243887 244244250 -9012333 - THE1B LTR MaLR 0 364 1 710 42 21 10 chr2 244244750 244244846 -9011737 - L1PA3 LINE L1 0 6155 6059 4725 157 22 24 chr2 244244871 244245791 -9010792 + MER49 LTR ERV1 1 918 -5 391 278 19 0 chr2 244246305 244246413 -9010170 + MER81 DNA DNA 5 114 0 1722 101 0 0 chr2 244246562 244246815 -9009768 - AluSx SINE Alu 0 312 64 199 307 178 0 chr2 244246895 244246996 -9009587 + MER5C DNA MER1_type 1 119 -205 614 158 6 89 chr2 244247255 244247413 -9009170 + Ricksha DNA DNA 1 145 -1109 1555 144 40 7 chr2 244247443 244247741 -9008842 + Ricksha DNA DNA 2439 2746 -500 1215 141 5 0 chr2 244247744 244247928 -9008655 + AluSq SINE Alu 4 188 -125 2388 189 18 6 chr2 244247928 244248419 -9008164 + Ricksha DNA DNA 2748 3244 -7 33417 47 33 1 chr2 244248861 244253394 -9003189 + L1P LINE L1 259 4935 -1211 1549 186 74 3 chr2 244253494 244253779 -9002804 - AluJb SINE Alu -7 305 1 1330 228 97 33 chr2 244253819 244254275 -9002308 + MLT2F LTR ERVL 179 663 0 438 273 40 0 chr2 244254336 244254486 -9002097 - MER74B LTR ERVL -159 463 308 262 323 0 31 chr2 244254472 244254599 -9001984 - MER74B LTR ERVL -444 178 56 * 1169 183 63 83 chr2 244254604 244254676 -9001907 - L1ME LINE L1 -500 5666 5594 2461 83 0 3 chr2 244254676 244254978 -9001605 - AluSc SINE Alu -6 303 3 1169 183 63 83 chr2 244254978 244255084 -9001499 - L1ME LINE L1 -572 5594 5487 2218 162 70 2 chr2 244255084 244255486 -9001097 - MSTB1 LTR MaLR 0 432 4 1169 183 63 83 chr2 244255486 244255788 -9000795 - L1ME LINE L1 -679 5487 5193 2009 189 16 20 chr2 244255789 244256240 -9000343 - L1MC3 LINE L1 -12 7773 7325 1674 186 118 10 chr2 244256269 244256786 -8999797 - L1ME LINE L1 -1232 4914 4342 7955 132 9 43 chr2 244256790 244257042 -8999541 - Tigger2 DNA MER2_type 0 2718 2459 2432 77 10 3 chr2 244257042 244257352 -8999231 + AluSq SINE Alu 2 313 0 7955 132 9 43 chr2 244257352 244257616 -8998967 - Tigger2 DNA MER2_type -259 2459 2188 2214 125 0 3 chr2 244257616 244257927 -8998656 + AluSg SINE Alu 1 310 0 7955 132 9 43 chr2 244257927 244258838 -8997745 - Tigger2 DNA MER2_type -530 2188 1338 378 246 0 37 chr2 244259263 244259450 -8997133 + (TATAA)n Simple_repeat Simple_repeat 1 180 0 570 185 0 36 chr2 244259507 244259785 -8996798 + (TATAA)n Simple_repeat Simple_repeat 1 267 0 274 332 129 42 chr2 244260573 244260766 -8995817 - MIR SINE MIR -25 237 28 22 0 0 0 chr2 244260849 244260871 -8995712 + AT_rich Low_complexity Low_complexity 1 22 0 812 237 96 39 chr2 244261534 244261846 -8994737 + MER46C DNA MER2_type 3 332 -6 183 42 0 0 chr2 244263735 244263759 -8992824 + (TTA)n Simple_repeat Simple_repeat 3 26 0 6286 16 7 3 chr2 244263759 244264485 -8992098 - L1PA3 LINE L1 -18 6137 5409 1965 153 0 3 chr2 244264643 244264931 -8991652 - AluJb SINE Alu -25 287 1 2430 179 31 4 chr2 244264960 244265441 -8991142 - L1MB3 LINE L1 -5 6178 5685 515 244 33 96 chr2 244265443 244265547 -8991036 - L1ME LINE L1 -2295 3851 3742 2315 122 8 27 chr2 244265547 244265916 -8990667 - THE1B LTR MaLR 0 364 3 11182 102 16 1 chr2 244265918 244267475 -8989108 - THE1B-int LTR MaLR 0 1580 1 2438 119 5 22 chr2 244267475 244267845 -8988738 - THE1B LTR MaLR 0 364 1 515 244 33 96 chr2 244267845 244268006 -8988577 - L1ME LINE L1 -2403 3743 3599 191 32 65 0 chr2 244268021 244268052 -8988531 + T-rich Low_complexity Low_complexity 4 36 0 7616 19 0 1 chr2 244268052 244269558 -8987025 - L1PA3 LINE L1 0 6155 4643 447 191 0 48 chr2 244270171 244270276 -8986307 - MER5C DNA MER1_type 0 324 225 212 176 20 0 chr2 244270285 244270336 -8986247 - MER5C DNA MER1_type -200 124 73 2127 163 13 40 chr2 244271985 244272434 -8984149 - L1MB7 LINE L1 -5 6179 5743 183 286 230 24 chr2 244272709 244272757 -8983826 + L2 LINE L2 1732 1769 -1545 790 188 71 0 chr2 244272757 244272911 -8983672 - FRAM SINE Alu 0 166 2 183 286 230 24 chr2 244272911 244273201 -8983382 + L2 LINE L2 1769 2140 -1174 225 231 110 11 chr2 244275280 244275371 -8981212 + L1MC5 LINE L1 7833 7932 -29 433 181 0 0 chr2 244275732 244275804 -8980779 + MSTB1 LTR MaLR 1 72 -360 227 255 0 0 chr2 244275926 244275977 -8980606 + (CA)n Simple_repeat Simple_repeat 1 51 0 322 276 157 19 chr2 244277040 244277461 -8979122 + L1MC4a LINE L1 4090 4568 -1578 397 334 35 57 chr2 244277470 244277813 -8978770 + L1MC4a LINE L1 5621 5955 -190 1823 141 23 3 chr2 244279984 244280290 -8976293 + Tigger2 DNA MER2_type 1312 1623 -1095 * 4142 148 34 31 chr2 244280288 244281014 -8975569 + Tigger2 DNA MER2_type 1911 2641 -77 2078 128 0 10 chr2 244281014 244281318 -8975265 + AluSg SINE Alu 2 302 -8 4142 148 34 31 chr2 244281318 244281397 -8975186 + Tigger2 DNA MER2_type 2641 2718 0 1663 194 117 10 chr2 244281397 244281918 -8974665 + L1MC4a LINE L1 4338 4914 -1232 1909 204 7 13 chr2 244281945 244282279 -8974304 + L1MC3 LINE L1 7324 7656 -129 5328 56 0 0 chr2 244282279 244282938 -8973645 + L1PA6 LINE L1 5492 6150 -4 1909 204 7 13 chr2 244282938 244283058 -8973525 + L1MC3 LINE L1 7656 7775 -10 * 4083 33 1 0 chr2 244283052 244283734 -8972849 - L1PA4 LINE L1 -600 5555 4873 5148 39 0 0 chr2 244283734 244284349 -8972234 + L1PA4 LINE L1 5538 6155 0 940 255 76 13 chr2 244284408 244284641 -8971942 + L1MC4a LINE L1 5243 5503 -663 2001 185 58 7 chr2 244284641 244285052 -8971531 + MSTB1 LTR MaLR 1 432 0 940 255 76 13 chr2 244285052 244285216 -8971367 + L1MC4a LINE L1 5503 5655 -511 409 226 30 95 chr2 244285241 244285496 -8971087 + MER74A LTR ERVL 15 402 -156 398 329 56 56 chr2 244285630 244286051 -8970532 + L1MC4a LINE L1 5652 6077 -44 1915 170 82 5 chr2 244286196 244286585 -8969998 + MSTA LTR MaLR 1 419 -9 2671 141 18 0 chr2 244286620 244287073 -8969510 + MSTA-int LTR MaLR 1 461 -1190 1313 176 15 18 chr2 244287075 244287150 -8969433 + L1MB3 LINE L1 5908 5982 -201 5129 84 9 3 chr2 244287150 244287837 -8968746 + LTR8 LTR ERV1 1 691 0 1313 176 15 18 chr2 244287837 244288033 -8968550 + L1MB3 LINE L1 5982 6178 -5 1124 278 47 22 chr2 244288050 244288540 -8968043 + L1M4 LINE L1 3836 4337 -1809 335 254 49 8 chr2 244288547 244288669 -8967914 + Tigger2 DNA MER2_type 7 133 -2585 1637 93 0 14 chr2 244288944 244289158 -8967425 - AluSg/x SINE Alu -19 291 81 1108 157 8 81 chr2 244292859 244293094 -8963489 - MER20 DNA MER1_type -1 218 1 21 71 0 0 chr2 244293962 244294004 -8962579 + AT_rich Low_complexity Low_complexity 1 42 0 27 0 0 0 chr2 244294746 244294773 -8961810 + AT_rich Low_complexity Low_complexity 1 27 0 1130 221 80 57 chr2 244295198 244295638 -8960945 - L1MC4 LINE L1 0 8042 7593 388 262 43 33 chr2 244296078 244296288 -8960295 - L1M4 LINE L1 -1306 4840 4629 22 35 0 0 chr2 244296942 244296971 -8959612 + AT_rich Low_complexity Low_complexity 1 29 0 242 247 67 0 chr2 244297010 244297099 -8959484 - L1M4 LINE L1 -1928 4218 4124 734 313 82 48 chr2 244298929 244299427 -8957156 - L1MEd LINE L1 -5281 838 324 1699 219 80 99 chr2 244299437 244300216 -8956367 + MER21B LTR ERV1 1 764 -99 294 264 88 71 chr2 244300222 244300321 -8956262 - L1MEd LINE L1 -5801 318 222 1894 188 14 19 chr2 244300321 244300688 -8955895 - MLT1A1 LTR MaLR 0 365 1 294 264 88 71 chr2 244300688 244300883 -8955700 - L1MEd LINE L1 -5897 222 19 334 214 0 0 chr2 244301176 244301260 -8955323 + L1M4 LINE L1 2920 3003 -3143 315 227 223 2 chr2 244301308 244301414 -8955169 - MIR SINE MIR -82 126 26 1301 130 149 23 chr2 244301458 244301719 -8954864 - AluJo SINE Alu -8 294 1 304 165 0 25 chr2 244301885 244301964 -8954619 + (TATG)n Simple_repeat Simple_repeat 1 77 0 342 260 53 30 chr2 244302055 244302224 -8954359 - L1ME4a LINE L1 -4 6117 5945 2054 155 0 59 chr2 244302539 244302946 -8953637 - MLT1B LTR MaLR 0 390 8 26 30 0 0 chr2 244303212 244303245 -8953338 + AT_rich Low_complexity Low_complexity 1 33 0 2164 206 55 97 chr2 244303813 244303997 -8952586 - L1M4 LINE L1 -2740 3406 3216 1532 158 40 0 chr2 244303997 244304244 -8952339 - AluJb SINE Alu -3 309 53 2164 206 55 97 chr2 244304244 244305111 -8951472 - L1M4 LINE L1 -2930 3216 2404 1651 172 0 40 chr2 244305111 244305408 -8951175 - AluJo SINE Alu -22 290 6 2164 206 55 97 chr2 244305408 244305493 -8951090 - L1M4 LINE L1 -3742 2404 2317 692 239 46 0 chr2 244305531 244305790 -8950793 - L1MEc LINE L1 -2717 3363 3093 1769 263 86 17 chr2 244305806 244306783 -8949800 - L1MEc LINE L1 -4092 2169 1126 1005 214 91 67 chr2 244306801 244306967 -8949616 + MER2 DNA MER2_type 7 168 -177 713 473 87 0 chr2 244306967 244307242 -8949341 + AluJo SINE Alu 3 301 -1 1005 214 91 67 chr2 244307242 244307406 -8949177 + MER2 DNA MER2_type 168 345 0 1317 164 0 14 chr2 244307458 244307678 -8948905 - AluSg/x SINE Alu -12 298 82 460 287 15 23 chr2 244307689 244307950 -8948633 - L1MEc LINE L1 -5066 1004 746 931 182 91 57 chr2 244308089 244308386 -8948197 - L1MA7 LINE L1 0 6291 5985 302 229 0 0 chr2 244308399 244308460 -8948123 - L1MEc LINE L1 -5455 615 555 417 224 158 38 chr2 244308609 244308792 -8947791 + MER58C DNA MER1_type 2 206 -9 225 234 90 0 chr2 244308890 244309001 -8947582 - L1MEc LINE L1 -5616 454 334 227 323 116 0 chr2 244309097 244309252 -8947331 - L1MEc LINE L1 -5884 186 14 281 220 23 45 chr2 244311015 244311147 -8945436 + T-rich Low_complexity Low_complexity 3 131 0 201 74 0 0 chr2 244311167 244311194 -8945389 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1321 193 54 0 chr2 244311197 244311436 -8945147 - AluJo SINE Alu -30 282 31 2293 158 66 45 chr2 244311458 244312230 -8944353 - MER51A LTR ERV1 -8 626 1 231 287 114 20 chr2 244312750 244312952 -8943631 + L1ME LINE L1 4626 4846 -1300 567 297 25 13 chr2 244313561 244313800 -8942783 + L1ME LINE L1 5573 5814 -307 336 64 0 0 chr2 244313873 244313920 -8942663 + (TG)n Simple_repeat Simple_repeat 2 48 0 2223 109 26 0 chr2 244314026 244314330 -8942253 + AluSx SINE Alu 1 312 0 356 271 129 29 chr2 244314426 244314566 -8942017 - MIR3 SINE MIR -46 162 9 189 245 255 10 chr2 244315453 244315551 -8941032 + L3 LINE CR1 786 907 -670 3891 186 32 9 chr2 244315890 244316656 -8939927 + Tigger2 DNA MER2_type 6 796 -1922 495 0 0 0 chr2 244316656 244316711 -8939872 + (GAAA)n Simple_repeat Simple_repeat 2 56 0 3891 186 32 9 chr2 244316711 244316806 -8939777 + Tigger2 DNA MER2_type 796 887 -1831 10555 144 14 20 chr2 244317243 244319115 -8937468 + Tigger2 DNA MER2_type 859 2718 0 1373 208 146 8 chr2 244319115 244319616 -8936967 + L1MC/D LINE L1 4338 4907 -1239 1901 191 11 35 chr2 244319651 244320020 -8936563 + L1MC3 LINE L1 7325 7682 -103 2183 128 0 0 chr2 244320020 244320316 -8936267 + AluSx SINE Alu 5 300 -12 1901 191 11 35 chr2 244320316 244320407 -8936176 + L1MC3 LINE L1 7682 7774 -11 765 176 70 18 chr2 244320442 244320669 -8935914 + L1MC/D LINE L1 5258 5496 -2499 1852 211 51 12 chr2 244320669 244321081 -8935502 + MSTB1 LTR MaLR 1 428 -4 4700 155 19 29 chr2 244321488 244322415 -8934168 + MER49 LTR ERV1 1 918 -5 399 260 19 0 chr2 244322929 244323033 -8933550 + MER81 DNA DNA 5 110 -4 2076 141 10 0 chr2 244323220 244323525 -8933058 - AluSx SINE Alu -4 308 1 209 320 114 32 chr2 244323592 244323811 -8932772 + MER5C DNA MER1_type 36 272 -52 602 163 6 88 chr2 244323946 244324106 -8932477 + Ricksha DNA DNA 1 147 -1107 3788 172 26 25 chr2 244324126 244324438 -8932145 + Ricksha DNA DNA 2424 2734 -512 2084 145 0 0 chr2 244324438 244324742 -8931841 + AluSx SINE Alu 1 304 -8 3788 172 26 25 chr2 244324742 244325241 -8931342 + Ricksha DNA DNA 2734 3236 -10 1077 245 56 25 chr2 244325305 244325713 -8930870 - L1M4 LINE L1 -935 5211 4791 398 307 31 80 chr2 244325729 244326055 -8930528 + L1MC5 LINE L1 7603 7912 -49 212 317 0 0 chr2 244326506 244326566 -8930017 + (CA)n Simple_repeat Simple_repeat 2 61 0 4921 156 14 7 chr2 244327445 244328065 -8928518 + HSMAR2 DNA Mariner 2 633 -669 2305 105 3 0 chr2 244328065 244328370 -8928213 + AluSp SINE Alu 1 306 -7 4921 156 14 7 chr2 244328370 244328658 -8927925 + HSMAR2 DNA Mariner 633 917 -385 376 279 0 7 chr2 244328975 244329082 -8927501 + FLAM_A SINE Alu 26 115 -18 2405 78 0 13 chr2 244329571 244329879 -8926704 + AluY SINE Alu 1 304 -7 1577 268 34 15 chr2 244330444 244331059 -8925524 + L1MC/D LINE L1 3142 3768 -2378 2292 138 5 24 chr2 244331059 244331430 -8925153 + THE1B LTR MaLR 1 364 0 11635 92 11 1 chr2 244331430 244332993 -8923590 + THE1B-int LTR MaLR 1 1580 0 1065 86 20 0 chr2 244332995 244333146 -8923437 + THE1B LTR MaLR 3 156 -208 * 1713 154 60 0 chr2 244333141 244333440 -8923143 + Tigger2 DNA MER2_type 1412 1728 -990 18060 152 24 13 chr2 244333446 244333737 -8922846 + L1M1 LINE L1 89 375 -7190 234 0 0 0 chr2 244333737 244333763 -8922820 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1962 136 25 0 chr2 244333767 244334047 -8922536 - AluSx SINE Alu -24 288 2 18060 152 24 13 chr2 244334047 244335416 -8921167 + L1M1 LINE L1 377 1729 -5836 357 43 0 0 chr2 244335416 244335463 -8921120 + (GA)n Simple_repeat Simple_repeat 2 48 0 18060 152 24 13 chr2 244335463 244337047 -8919536 + L1M1 LINE L1 1729 3375 -4190 977 112 84 17 chr2 244337047 244337225 -8919358 - MER83 LTR ERV1 0 448 259 1679 133 40 3 chr2 244337407 244337709 -8918874 - MER83 LTR ERV1 -135 313 1 1437 127 0 0 chr2 244337710 244337922 -8918661 - MER83-int LTR ERV1 -11 4274 4063 339 205 45 89 chr2 244337922 244338034 -8918549 - L1M4 LINE L1 -1242 4904 4798 544 279 69 69 chr2 244338037 244338385 -8918198 + L1MC5 LINE L1 7585 7932 -29 325 103 241 0 chr2 244338757 244338815 -8917768 + MSTB LTR MaLR 1 72 -354 211 274 0 0 chr2 244338936 244338987 -8917596 + (CA)n Simple_repeat Simple_repeat 1 51 0 386 272 121 18 chr2 244340116 244340447 -8916136 + L1MC/D LINE L1 4204 4568 -1578 230 346 24 0 chr2 244340539 244340747 -8915836 + L1MC/D LINE L1 5689 5901 -1907 866 213 82 0 chr2 244342938 244343121 -8913462 + MSTB LTR MaLR 1 198 -228 19835 106 29 1 chr2 244343169 244346450 -8910133 + L1P LINE L1 1553 4924 -1222 6657 67 9 6 chr2 244346599 244348024 -8908559 + L1PA7 LINE L1 4725 6151 -3 508 119 0 0 chr2 244348058 244348142 -8908441 + L1PA10 LINE L1 6085 6168 0 1311 151 39 0 chr2 244348142 244348374 -8908209 + MSTB LTR MaLR 186 426 0 2771 249 28 58 chr2 244348767 244349451 -8907132 + L1M4 LINE L1 3178 3812 -2334 2319 166 69 7 chr2 244349451 244349916 -8906667 + L1MB3 LINE L1 5685 6178 -5 2771 249 28 58 chr2 244349916 244350429 -8906154 + L1M4 LINE L1 3812 4339 -1807 12496 163 35 12 chr2 244350429 244351167 -8905416 + Tigger2 DNA MER2_type 1 720 -1998 693 66 0 0 chr2 244351167 244351258 -8905325 + (GGAA)n Simple_repeat Simple_repeat 3 93 0 12496 163 35 12 chr2 244351258 244352916 -8903667 + Tigger2 DNA MER2_type 720 2453 -265 4526 115 29 12 chr2 244352923 244353686 -8902897 - L1PA16 LINE L1 -11 6155 5380 1018 201 35 0 chr2 244353686 244353915 -8902668 + Tigger2 DNA MER2_type 2481 2717 -1 1266 205 191 4 chr2 244353915 244354422 -8902161 + L1M4 LINE L1 4337 4948 -1198 1772 202 18 23 chr2 244354431 244354872 -8901711 + L1MC3 LINE L1 7330 7768 -17 524 178 0 85 chr2 244355041 244355170 -8901413 - L1M4 LINE L1 -1237 4909 4792 360 319 65 16 chr2 244355171 244355365 -8901218 + L1MC5 LINE L1 7609 7885 -157 7345 72 6 2 chr2 244355365 244357127 -8899456 + L1PA6 LINE L1 4382 6148 -6 420 167 0 0 chr2 244357674 244357740 -8898843 + MSTB1 LTR MaLR 7 72 -360 211 274 0 0 chr2 244357861 244357912 -8898671 + (CA)n Simple_repeat Simple_repeat 1 51 0 242 277 81 25 chr2 244359083 244359368 -8897215 + L1MC/D LINE L1 4268 4568 -1578 256 322 34 10 chr2 244359460 244359668 -8896915 + L1MC/D LINE L1 5689 5901 -1907 24 0 0 0 chr2 244359895 244359919 -8896664 + AT_rich Low_complexity Low_complexity 1 24 0 877 174 87 0 chr2 244362065 244362237 -8894346 + MSTB LTR MaLR 1 187 -239 25004 87 14 3 chr2 244362248 244366802 -8889781 + L1PA7 LINE L1 1553 6152 -2 493 133 0 0 chr2 244366833 244366916 -8889667 + L1PA10 LINE L1 6086 6168 0 1255 159 40 0 chr2 244366920 244367146 -8889437 + MSTB LTR MaLR 192 426 0 2332 239 32 65 chr2 244367538 244368207 -8888376 + L1MC4a LINE L1 3178 3807 -2339 2322 154 68 17 chr2 244368207 244368675 -8887908 + L1MB3 LINE L1 5687 6178 -5 2332 239 32 65 chr2 244368675 244368981 -8887602 + L1MC4a LINE L1 3807 4121 -2025 1948 175 75 0 chr2 244369011 244369400 -8887183 + Tigger2 DNA MER2_type 1238 1655 -1063 839 197 16 6 chr2 244369368 244369551 -8887032 + Tigger2 DNA MER2_type 1911 2095 -623 * 2201 61 48 7 chr2 244369560 244369854 -8886729 + AluY SINE Alu 1 306 -5 1381 203 9 3 chr2 244369855 244370175 -8886408 + L1MC3 LINE L1 7464 7785 0 999 250 36 21 chr2 244370192 244370359 -8886224 + L1MC4a LINE L1 5319 5482 -684 1895 189 64 5 chr2 244370359 244370767 -8885816 + MSTB1 LTR MaLR 1 432 0 999 250 36 21 chr2 244370767 244370931 -8885652 + L1MC4a LINE L1 5482 5655 -511 370 266 20 75 chr2 244370959 244371211 -8885372 + MER74B LTR ERVL 71 460 -162 377 310 61 61 chr2 244371345 244371771 -8884812 + L1MC4a LINE L1 5652 6077 -44 1761 171 79 8 chr2 244371914 244372293 -8884290 + MSTA LTR MaLR 1 406 -22 9655 155 27 6 chr2 244372342 244373959 -8882624 + MSTB-int LTR MaLR 1 1651 0 1857 168 68 72 chr2 244373960 244374388 -8882195 + MSTB LTR MaLR 1 426 0 1825 98 66 16 chr2 244375685 244375990 -8880593 + THE1B LTR MaLR 1 320 -44 1690 246 31 50 chr2 244376845 244377571 -8879012 + L1ME LINE L1 3137 3819 -2327 2304 186 25 12 chr2 244377571 244377862 -8878721 + L1MB3 LINE L1 5685 5986 -197 5133 82 9 3 chr2 244377862 244378549 -8878034 + LTR8 LTR ERV1 1 691 0 2304 186 25 12 chr2 244378549 244378742 -8877841 + L1MB3 LINE L1 5986 6175 -8 1690 246 31 50 chr2 244378742 244378877 -8877706 + L1ME LINE L1 3819 3955 -2191 4453 176 15 6 chr2 244379058 244379937 -8876646 + Tigger2 DNA MER2_type 1 887 -1831 2361 139 58 0 chr2 244380366 244380799 -8875784 + Tigger2 DNA MER2_type 851 1308 -1410 625 162 43 0 chr2 244380792 244380909 -8875674 + MSTB1 LTR MaLR 311 432 0 * 305 248 109 0 chr2 244380909 244381010 -8875573 + L1ME LINE L1 5489 5600 -566 443 199 0 4 chr2 244381114 244381214 -8875369 + L1ME LINE L1 5575 5662 -504 400 248 29 72 chr2 244381214 244381478 -8875105 + MER74B LTR ERVL 1 460 -162 590 253 174 0 chr2 244381535 244381788 -8874795 - MLT2F LTR ERVL 0 663 367 382 117 39 65 chr2 244381814 244381891 -8874692 - THE1A LTR MaLR 0 375 301 1059 120 11 2 chr2 244381895 244382154 -8874429 - THE1-int LTR MaLR -900 680 373 1482 153 18 7 chr2 244382155 244382437 -8874146 - THE1A LTR MaLR -70 285 1 6651 115 95 3 chr2 244382437 244383527 -8873056 - THE1A-int LTR MaLR 0 1580 390 801 224 55 0 chr2 244383633 244383834 -8872749 - L1M4 LINE L1 -1144 5002 4791 263 282 45 13 chr2 244383833 244383989 -8872594 + L1MC4 LINE L1 7693 7853 -189 * 217 343 0 0 chr2 244384612 244384679 -8871904 + (CA)n Simple_repeat Simple_repeat 1 67 0 5110 148 14 2 chr2 244385567 244386472 -8870111 + HSMAR2 DNA Mariner 2 917 -385 585 214 0 0 chr2 244386790 244386902 -8869681 + FLAM_A SINE Alu 27 138 -4 2175 116 0 10 chr2 244389189 244389491 -8867092 + AluSx SINE Alu 1 299 -13 250 353 86 7 chr2 244390604 244390795 -8865788 - MIR SINE MIR -54 208 6 257 306 102 0 chr2 244392459 244392580 -8864003 - MIR SINE MIR -21 241 104 2192 124 0 0 chr2 244393043 244393334 -8863249 + AluSx SINE Alu 1 291 -21 557 209 139 6 chr2 244395426 244395584 -8860999 + MIR SINE MIR 83 261 -1 390 242 59 62 chr2 244395766 244396002 -8860581 - MER91B DNA MER1_type -1 189 1 257 268 0 24 chr2 244396008 244396090 -8860493 + MER5B DNA MER1_type 83 162 -16 22 0 0 0 chr2 244397073 244397095 -8859488 + AT_rich Low_complexity Low_complexity 1 22 0 2654 202 39 30 chr2 244398203 244398886 -8857697 - L1MB7 LINE L1 -11 6173 5482 2441 93 0 0 chr2 244398886 244399188 -8857395 - AluSx SINE Alu -10 302 1 225 0 0 0 chr2 244399196 244399221 -8857362 + (T)n Simple_repeat Simple_repeat 1 25 0 4469 88 19 21 chr2 244399294 244399644 -8856939 - L1PB1 LINE L1 -8 6143 5793 402 21 0 0 chr2 244399644 244399691 -8856892 + (CA)n Simple_repeat Simple_repeat 1 47 0 4469 88 19 21 chr2 244399691 244399786 -8856797 - L1PB1 LINE L1 -358 5793 5699 2432 65 0 10 chr2 244399786 244400093 -8856490 + AluY SINE Alu 1 304 -7 4469 88 19 21 chr2 244400093 244400296 -8856287 - L1PB1 LINE L1 -452 5699 5496 680 222 62 27 chr2 244400335 244400592 -8855991 + L1ME1 LINE L1 4278 4543 -1603 1091 116 12 23 chr2 244400592 244400764 -8855819 - AluSg/x SINE Alu -9 303 134 2275 82 31 0 chr2 244400764 244401057 -8855526 - AluY SINE Alu -9 302 1 848 223 83 4 chr2 244401065 244401307 -8855276 + L1ME1 LINE L1 4539 4799 -1347 550 209 127 0 chr2 244401317 244401451 -8855132 + MER58C DNA MER1_type 28 178 -37 2184 236 98 27 chr2 244401461 244402713 -8853870 + L1ME1 LINE L1 4815 6161 -5 508 330 108 41 chr2 244402766 244403373 -8853210 + L2 LINE L2 2630 3267 -5 1623 159 86 23 chr2 244403795 244404179 -8852404 + Tigger6 DNA MER2_type 2 409 -674 417 193 0 0 chr2 244404170 244404253 -8852330 + Tigger6 DNA MER2_type 949 1031 -566 * 1681 186 52 8 chr2 244404249 244404635 -8851948 + Tigger6 DNA MER2_type 1195 1597 0 365 263 125 31 chr2 244406025 244406185 -8850398 + MER104 DNA Tc2 1 175 -5 2428 92 0 3 chr2 244406769 244407083 -8849500 + AluSq SINE Alu 1 313 0 2313 102 7 3 chr2 244407609 244407914 -8848669 - AluSx SINE Alu -6 306 1 339 273 85 34 chr2 244407943 244408119 -8848464 - L1ME4a LINE L1 -1 6120 5936 909 241 82 36 chr2 244408133 244409427 -8847156 + L1MC5 LINE L1 6451 7829 -132 397 113 0 0 chr2 244409436 244409498 -8847085 + MER46A DNA MER2_type 4 65 -171 5293 154 15 31 chr2 244409507 244410554 -8846029 - L1MA6 LINE L1 -24 7695 6683 1648 167 7 52 chr2 244410554 244410860 -8845723 - AluSx SINE Alu -20 292 1 5293 154 15 31 chr2 244410860 244411472 -8845111 - L1MA6 LINE L1 -1036 6683 6063 * 6614 210 55 44 chr2 244411467 244414301 -8842282 - L1MA6 LINE L1 -2320 5245 2384 1569 254 8 15 chr2 244414296 244414776 -8841807 - L1M2c LINE L1 -4944 1845 1369 * 870 154 51 72 chr2 244414953 244415148 -8841435 + MER46A DNA MER2_type 46 236 0 2518 265 209 20 chr2 244415261 244416272 -8840311 + L2 LINE L2 1767 2968 -346 4976 63 5 12 chr2 244417826 244418474 -8838109 + L1PA10 LINE L1 5516 6158 -10 184 216 118 0 chr2 244419178 244419229 -8837354 - L2 LINE L2 -212 3060 3004 236 268 54 18 chr2 244421517 244421629 -8834954 - L1MC/D LINE L1 -1906 5902 5787 762 173 0 47 chr2 244421916 244422066 -8834517 + FLAM_C SINE Alu 1 143 0 492 236 75 37 chr2 244422210 244422453 -8834130 - L1MC4a LINE L1 -304 5817 5689 482 118 11 0 chr2 244422455 244422548 -8834035 + (TA)n Simple_repeat Simple_repeat 1 94 0 277 212 30 15 chr2 244422548 244422614 -8833969 - L1MC4a LINE L1 -2119 5689 5623 1183 166 174 19 chr2 244422630 244422889 -8833694 - AluJo SINE Alu -3 299 1 511 319 62 19 chr2 244422892 244423271 -8833312 - L1MC/D LINE L1 -473 5648 5371 1752 171 61 3 chr2 244425077 244425405 -8831178 - MER7A DNA MER2_type 0 346 2 296 267 0 0 chr2 244425700 244425760 -8830823 - L2 LINE L2 -12 3260 3201 324 64 0 0 chr2 244425822 244425869 -8830714 + (CA)n Simple_repeat Simple_repeat 1 47 0 2140 125 3 28 chr2 244427001 244427320 -8829263 + AluSx SINE Alu 1 311 -1 305 190 25 13 chr2 244427381 244427460 -8829123 - MER116 DNA Mariner 0 80 1 1787 141 29 10 chr2 244428534 244428840 -8827743 - AluJo SINE Alu 0 312 1 432 212 158 64 chr2 244429561 244429764 -8826819 + L2 LINE L2 3087 3308 -5 989 263 103 82 chr2 244432041 244432690 -8823893 + L1ME LINE L1 3580 4226 -1920 2105 114 13 19 chr2 244432690 244432998 -8823585 + AluJb SINE Alu 1 306 -6 989 263 103 82 chr2 244432998 244433096 -8823487 + L1ME LINE L1 4226 4320 -1826 250 314 38 0 chr2 244433128 244433233 -8823350 + L1ME LINE L1 4507 4615 -1531 529 153 0 0 chr2 244433294 244433379 -8823204 - AluY SINE Alu -9 302 218 286 286 113 6 chr2 244433434 244433602 -8822981 + L1ME LINE L1 4764 4949 -1197 870 146 0 0 chr2 244433642 244433786 -8822797 - MER46A DNA MER2_type 0 236 93 601 288 98 21 chr2 244433838 244433963 -8822620 + L1ME LINE L1 4943 5057 -1123 1779 186 0 3 chr2 244433963 244434264 -8822319 - AluSx SINE Alu -11 301 2 601 288 98 21 chr2 244434264 244434589 -8821994 + L1ME LINE L1 5057 5427 -753 881 155 0 2 chr2 244434639 244434890 -8821693 + AluJb SINE Alu 1 308 -4 301 311 74 26 chr2 244434895 244435085 -8821498 + L1ME LINE L1 5541 5739 -423 901 115 0 0 chr2 244435094 244435216 -8821367 - AluSg/x SINE Alu -15 297 176 288 0 0 0 chr2 244437812 244437844 -8818739 + (CA)n Simple_repeat Simple_repeat 2 33 0 2313 85 0 0 chr2 244437896 244438190 -8818393 - AluSc SINE Alu -15 294 1 430 335 75 16 chr2 244438732 244438920 -8817663 - L1MC/D LINE L1 -2003 5805 5607 600 331 103 15 chr2 244438939 244439347 -8817236 + L1ME LINE L1 5290 5733 -429 2218 113 0 3 chr2 244442009 244442320 -8814263 + AluSx SINE Alu 1 310 -2 554 320 80 5 chr2 244444014 244444214 -8812369 + MIR SINE MIR 21 235 -27 359 248 53 38 chr2 244444236 244444369 -8812214 + MLT1L LTR MaLR 155 289 -326 1126 224 4 4 chr2 244444380 244444626 -8811957 + AluJo SINE Alu 57 302 -10 289 114 0 0 chr2 244444676 244444720 -8811863 + MLT1L LTR MaLR 348 391 -224 638 284 152 43 chr2 244450979 244451355 -8805228 + L1M4 LINE L1 2316 2702 -3444 833 163 0 0 chr2 244451874 244452003 -8804580 - FLAM_C SINE Alu -4 129 1 227 179 0 113 chr2 244453758 244453953 -8802630 + (GAGTG)n Simple_repeat Simple_repeat 1 173 0 283 256 73 12 chr2 244454013 244454177 -8802406 + (AGGTG)n Simple_repeat Simple_repeat 5 178 0 228 377 19 9 chr2 244454263 244454369 -8802214 + MIR3 SINE MIR 99 205 -3 21 0 0 0 chr2 244456436 244456457 -8800126 + AT_rich Low_complexity Low_complexity 1 21 0 2238 87 0 13 chr2 244456554 244456864 -8799719 - AluSc SINE Alu -3 306 1 2011 114 62 0 chr2 244458579 244458869 -8797714 + AluSx SINE Alu 1 308 -4 540 324 109 0 chr2 244459336 244459546 -8797037 + MIR SINE MIR 27 259 -3 439 348 101 26 chr2 244459588 244460041 -8796542 + L2 LINE L2 2737 3222 -50 447 373 109 42 chr2 244460879 244461383 -8795200 - L1ME4a LINE L1 -2 6119 5582 1685 250 74 26 chr2 244462831 244463440 -8793143 - L1MB8 LINE L1 -5 6173 5536 888 176 7 0 chr2 244465754 244465902 -8790681 + AluJb SINE Alu 149 297 -15 3337 155 24 14 chr2 244468401 244469020 -8787563 + MER51A LTR ERV1 1 625 -9 26 0 0 0 chr2 244469936 244469962 -8786621 + AT_rich Low_complexity Low_complexity 1 26 0 237 156 195 65 chr2 244469971 244470048 -8786535 - MER58 DNA MER1_type -124 91 5 392 289 143 80 chr2 244473997 244474386 -8782197 + L1MC/D LINE L1 5175 5597 -743 2339 94 0 0 chr2 244474569 244474876 -8781707 + AluSc SINE Alu 1 307 -2 966 195 18 7 chr2 244477601 244477919 -8778664 + AluJ SINE Alu 24 308 -4 638 25 12 0 chr2 244478657 244478737 -8777846 + (TAGA)n Simple_repeat Simple_repeat 2 82 0 1039 211 162 11 chr2 244481849 244482133 -8774450 - MER58B DNA MER1_type -2 339 13 325 162 152 50 chr2 244483633 244483732 -8772851 + L1ME4a LINE L1 5255 5363 -2445 6153 105 45 14 chr2 244483741 244484786 -8771797 - L1MA3 LINE L1 0 6305 5228 2346 78 0 0 chr2 244484787 244485095 -8771488 - AluY SINE Alu 0 308 1 445 85 0 0 chr2 244485095 244485154 -8771429 - AluY SINE Alu -177 134 76 1429 139 10 0 chr2 244485154 244485362 -8771221 - AluY SINE Alu -100 211 2 5438 144 26 60 chr2 244485362 244486513 -8770070 - L1MA3 LINE L1 -910 5236 4125 403 330 48 11 chr2 244486507 244486779 -8769804 + L1ME4a LINE L1 5342 5625 -496 * 1405 266 76 11 chr2 244486957 244487431 -8769152 - L1MC4a LINE L1 -1851 5957 5453 180 0 0 0 chr2 244488578 244488598 -8767985 + (CAA)n Simple_repeat Simple_repeat 2 21 0 340 269 107 40 chr2 244488780 244488929 -8767654 + MIR SINE MIR 24 182 -80 2373 112 0 3 chr2 244489831 244490135 -8766448 + AluSx SINE Alu 1 303 -9 768 216 260 22 chr2 244490448 244490814 -8765769 + L1ME3A LINE L1 5285 5737 -433 364 255 98 44 chr2 244490840 244491044 -8765539 + L1ME3A LINE L1 5835 6049 -121 715 306 102 37 chr2 244491326 244491835 -8764748 + L1MC4a LINE L1 5360 5901 -1907 2430 94 0 3 chr2 244491986 244492295 -8764288 + AluY SINE Alu 1 308 -3 191 311 169 23 chr2 244493151 244493328 -8763255 + L3 LINE CR1 626 828 -749 1227 229 44 36 chr2 244493429 244493814 -8762769 + L1MDa LINE L1 35 422 -6118 3617 189 51 1 chr2 244493923 244494705 -8761878 + L1MD1 LINE L1 5354 6174 -68 372 265 214 78 chr2 244495747 244496325 -8760258 - L2 LINE L2 -339 2975 2319 239 290 93 9 chr2 244496487 244496594 -8759989 + L1ME4a LINE L1 5596 5711 -459 635 234 31 26 chr2 244547484 244547676 -8708907 - L1MB8 LINE L1 -1 6177 5985 698 272 117 25 chr2 244547677 244547723 -8708860 + L1 LINE L1 3629 3669 -2477 1155 291 43 20 chr2 244547723 244548214 -8708369 + MLT1D LTR MaLR 4 505 0 698 272 117 25 chr2 244548214 244548491 -8708092 + L1 LINE L1 3669 3982 -2164 22 0 0 0 chr2 244550312 244550334 -8706249 + AT_rich Low_complexity Low_complexity 1 22 0 259 284 193 23 chr2 244550631 244550849 -8705734 + L1ME4a LINE L1 5718 5972 -149 668 188 46 110 chr2 244550871 244551089 -8705494 - MER20 DNA MER1_type 0 219 16 2002 129 7 0 chr2 244551531 244551833 -8704750 + AluSx SINE Alu 1 304 -8 438 78 0 0 chr2 244552658 244552722 -8703861 + L1MB2 LINE L1 6104 6167 -4 278 178 41 14 chr2 244552840 244552913 -8703670 + L1ME4a LINE L1 6017 6091 -30 1467 194 7 11 chr2 244552939 244553222 -8703361 + AluJb SINE Alu 1 282 -30 670 193 0 0 chr2 244553787 244553896 -8702687 + FLAM_A SINE Alu 14 122 -20 272 342 0 25 chr2 244555247 244555367 -8701216 - L2 LINE L2 -4 3309 3193 297 256 105 35 chr2 244555430 244555602 -8700981 + L1ME2 LINE L1 3440 3623 -2523 866 155 0 0 chr2 244555619 244555748 -8700835 - AluSq/x SINE Alu -183 129 1 4872 213 91 33 chr2 244555816 244558165 -8698418 + L1ME2 LINE L1 3685 6164 0 327 213 0 0 chr2 244558224 244558285 -8698298 + MER94 DNA DNA 2 62 -72 670 139 73 36 chr2 244558745 244558882 -8697701 + FLAM_C SINE Alu 2 143 0 261 0 0 0 chr2 244559047 244559076 -8697507 + (A)n Simple_repeat Simple_repeat 1 29 0 1942 102 35 0 chr2 244560534 244560819 -8695764 + AluSx SINE Alu 5 299 -13 1897 148 0 3 chr2 244561082 244561380 -8695203 - AluJo SINE Alu -15 297 1 466 186 39 10 chr2 244561748 244561850 -8694733 - MIR SINE MIR -85 177 73 707 201 21 7 chr2 244562098 244562242 -8694341 - Charlie4 DNA MER1_type 0 1961 1816 1284 231 171 28 chr2 244562510 244562942 -8693641 + MLT1D LTR MaLR 12 505 0 1400 176 164 42 chr2 244563063 244563318 -8693265 - MSTD LTR MaLR 0 396 85 2266 97 0 3 chr2 244563318 244563628 -8692955 - AluSp SINE Alu -3 310 2 1400 176 164 42 chr2 244563628 244563725 -8692858 - MSTD LTR MaLR -311 85 1 314 291 59 92 chr2 244564526 244564797 -8691786 + L1MC4a LINE L1 5698 5959 -1849 2199 82 0 35 chr2 244564930 244565247 -8691336 + AluSg SINE Alu 5 310 0 2232 102 0 3 chr2 244565283 244565588 -8690995 - AluSx SINE Alu -8 304 1 2157 117 3 0 chr2 244566918 244567227 -8689356 - AluSx SINE Alu -2 310 1 511 266 38 32 chr2 244567614 244567772 -8688811 - MIR SINE MIR -58 204 46 403 212 119 17 chr2 244569556 244569674 -8686909 - L2 LINE L2 -3 3310 3181 2073 106 10 0 chr2 244569944 244570236 -8686347 + AluSx SINE Alu 3 297 -15 2302 54 3 14 chr2 244570421 244570718 -8685865 + AluY SINE Alu 1 294 -17 237 155 0 0 chr2 244571911 244571969 -8684614 + (CA)n Simple_repeat Simple_repeat 2 59 0 241 324 60 100 chr2 244572008 244572289 -8684294 + L2 LINE L2 3001 3270 -2 866 197 5 37 chr2 244572839 244573027 -8683556 + AluJb SINE Alu 131 312 0 276 100 0 0 chr2 244573054 244573094 -8683489 + (GGGGA)n Simple_repeat Simple_repeat 1 40 0 200 33 0 33 chr2 244573095 244573125 -8683458 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 1602 201 3 0 chr2 244573208 244573521 -8683062 + AluJb SINE Alu 1 314 0 387 315 24 108 chr2 244573584 244573676 -8682907 + L1M4 LINE L1 2154 2252 -3894 1595 178 20 0 chr2 244573676 244573980 -8682603 + AluJo SINE Alu 1 310 -2 387 315 24 108 chr2 244573980 244574150 -8682433 + L1M4 LINE L1 2252 2377 -3769 1690 165 0 4 chr2 244574150 244574429 -8682154 + AluJo SINE Alu 23 300 -12 387 315 24 108 chr2 244574429 244574546 -8682037 + L1M4 LINE L1 2377 2502 -3644 1870 127 27 0 chr2 244574696 244574988 -8681595 + AluSx SINE Alu 1 300 -12 372 317 127 59 chr2 244574990 244575034 -8681549 + L1M4 LINE L1 3129 3169 -2977 1864 153 0 3 chr2 244575034 244575342 -8681241 + AluSx SINE Alu 1 307 -5 2027 116 0 35 chr2 244575344 244575663 -8680920 + AluSx SINE Alu 1 308 -4 372 317 127 59 chr2 244575663 244576120 -8680463 + L1M4 LINE L1 3169 3667 -2479 1797 163 0 0 chr2 244576347 244576636 -8679947 + AluSx SINE Alu 1 289 -23 21 36 0 0 chr2 244576997 244577025 -8679558 + AT_rich Low_complexity Low_complexity 1 28 0 334 207 86 26 chr2 244577475 244577591 -8678992 + L1ME4a LINE L1 5964 6086 -35 2188 79 3 3 chr2 244577645 244577935 -8678648 + AluSp SINE Alu 7 296 -17 855 119 0 0 chr2 244579507 244579625 -8676958 + AluSq/x SINE Alu 1 118 -195 2218 97 3 7 chr2 244579625 244579934 -8676649 + AluSx SINE Alu 1 308 -4 22 0 0 0 chr2 244579951 244579973 -8676610 + AT_rich Low_complexity Low_complexity 1 22 0 204 158 0 0 chr2 244582650 244582688 -8673895 + (CA)n Simple_repeat Simple_repeat 1 38 0 267 346 78 39 chr2 244584586 244584892 -8671691 - L1ME4a LINE L1 -188 5933 5616 333 280 52 75 chr2 244585069 244585331 -8671252 + L1M4 LINE L1 5023 5275 -871 2169 125 0 0 chr2 244585331 244585644 -8670939 + AluSq SINE Alu 1 313 0 333 280 52 75 chr2 244585644 244585767 -8670816 + L1M4 LINE L1 5275 5399 -747 2196 93 3 3 chr2 244586420 244586720 -8669863 - AluSx SINE Alu -12 300 1 342 275 66 0 chr2 244586797 244586914 -8669669 - MIR SINE MIR -65 143 44 473 265 96 0 chr2 244587105 244587241 -8669342 - MIR SINE MIR -71 191 43 297 186 57 14 chr2 244588644 244588714 -8667869 + MER5A DNA MER1_type 1 73 -116 652 165 0 0 chr2 244588717 244588826 -8667757 + HY1 scRNA scRNA 2 110 -2 221 167 61 15 chr2 244588827 244588893 -8667690 + A-rich Low_complexity Low_complexity 2 70 0 275 259 96 30 chr2 244589033 244589168 -8667415 + MER5B DNA MER1_type 5 148 -30 350 351 50 53 chr2 244589310 244589609 -8666974 + L2 LINE L2 2900 3197 -75 931 183 291 0 chr2 244589626 244589772 -8666811 - AluJo SINE Alu -5 297 195 219 69 0 0 chr2 244589772 244589801 -8666782 + (TTTTG)n Simple_repeat Simple_repeat 5 33 0 931 183 291 0 chr2 244589801 244589884 -8666699 - AluJo SINE Alu -107 195 1 635 219 76 0 chr2 244589891 244590114 -8666469 + L1MC4a LINE L1 5227 5470 -747 842 116 0 48 chr2 244590122 244590244 -8666339 + FLAM_C SINE Alu 1 116 -196 2147 98 7 0 chr2 244590244 244590540 -8666043 - AluSx SINE Alu -14 298 1 842 116 0 48 chr2 244590540 244590564 -8666019 + FLAM_C SINE Alu 116 140 -172 1329 165 68 54 chr2 244590565 244590868 -8665715 + AluJb SINE Alu 1 307 0 882 299 78 17 chr2 244590874 244591282 -8665301 + L1MC4a LINE L1 5482 5914 -1894 2265 92 0 3 chr2 244591288 244591593 -8664990 + AluSq SINE Alu 1 304 -9 240 227 30 0 chr2 244591838 244591904 -8664679 - MIR SINE MIR -19 243 176 1240 14 0 7 chr2 244591904 244592046 -8664537 - L1PA5 LINE L1 -182 5972 5832 25 31 0 0 chr2 244592060 244592092 -8664491 + AT_rich Low_complexity Low_complexity 1 32 0 436 253 231 11 chr2 244592162 244592366 -8664217 - MIR SINE MIR -3 259 10 2190 112 0 3 chr2 244593352 244593664 -8662919 - AluSx SINE Alu -1 311 1 1408 180 3 90 chr2 244593703 244594036 -8662547 + AluJo SINE Alu 1 304 -8 1615 187 0 0 chr2 244594038 244594321 -8662262 + AluJo SINE Alu 2 284 -28 2090 119 7 0 chr2 244594321 244594631 -8661952 + AluSx SINE Alu 1 312 0 226 208 169 0 chr2 244595257 244595334 -8661249 - HAL1b LINE L1 -6 1342 1253 289 262 107 0 chr2 244595716 244595838 -8660745 - L1ME LINE L1 -369 5752 5618 26 0 0 0 chr2 244596052 244596078 -8660505 + AT_rich Low_complexity Low_complexity 1 26 0 1696 152 11 3 chr2 244596350 244596658 -8659925 + AluJo SINE Alu 1 310 0 3203 183 78 31 chr2 244596884 244597620 -8658963 + L1MB5 LINE L1 4900 5600 -574 1792 157 13 10 chr2 244597620 244597926 -8658657 + AluJo SINE Alu 1 307 -5 3203 183 78 31 chr2 244597926 244598155 -8658428 + L1MB5 LINE L1 5600 5817 -357 1804 141 0 10 chr2 244598155 244598460 -8658123 + AluSx SINE Alu 1 302 -10 3203 183 78 31 chr2 244598460 244598671 -8657912 + L1MB5 LINE L1 5817 6138 -36 22 56 0 0 chr2 244599204 244599240 -8657343 + AT_rich Low_complexity Low_complexity 1 36 0 278 176 104 48 chr2 244599842 244599967 -8656616 + L1MC4 LINE L1 6937 7068 -974 1970 106 10 13 chr2 244600144 244600445 -8656138 - AluSx SINE Alu -12 300 1 294 269 99 60 chr2 244600456 244600657 -8655926 + L1MC4 LINE L1 7110 7318 -724 766 162 0 22 chr2 244600680 244600816 -8655767 + FLAM_C SINE Alu 1 133 0 323 235 25 12 chr2 244601000 244601081 -8655502 + L1MC5 LINE L1 7338 7419 -542 312 87 0 0 chr2 244601088 244601134 -8655449 - MADE1 DNA Mariner 0 80 35 2261 90 0 0 chr2 244601140 244601439 -8655144 + AluSx SINE Alu 1 299 -13 431 225 129 44 chr2 244601447 244601780 -8654803 + L1MC4 LINE L1 7534 7854 -188 194 313 191 21 chr2 244602140 244602658 -8653925 + L2 LINE L2 2372 2977 -337 2022 256 104 25 chr2 244602689 244603127 -8653456 - L1MEc LINE L1 -3029 3100 2698 1938 110 3 45 chr2 244603127 244603436 -8653147 + AluSq SINE Alu 4 299 -14 2022 256 104 25 chr2 244603436 244604225 -8652358 - L1MEc LINE L1 -3431 2698 1811 575 217 85 16 chr2 244604362 244604551 -8652032 - L1MEc LINE L1 -4549 1580 1379 637 140 0 0 chr2 244604551 244604651 -8651932 - AluSg/x SINE Alu -2 307 208 7223 142 29 8 chr2 244604690 244605889 -8650694 - Tigger3b DNA MER2_type 0 1231 7 420 215 98 77 chr2 244605937 244605994 -8650589 - L1MEc LINE L1 -4884 1235 1181 2071 134 0 0 chr2 244605994 244606300 -8650283 - AluSq SINE Alu -7 306 1 420 215 98 77 chr2 244606300 244606567 -8650016 - L1MEc LINE L1 -4938 1181 904 2106 120 0 7 chr2 244606571 244606871 -8649712 + AluSq SINE Alu 1 298 -15 758 155 17 0 chr2 244606877 244606993 -8649590 - AluSq/x SINE Alu -185 128 11 263 203 0 17 chr2 244607006 244607065 -8649518 - L1MEc LINE L1 -5206 913 856 304 271 14 0 chr2 244607299 244607369 -8649214 - L1MEc LINE L1 -5488 631 561 670 242 106 66 chr2 244607673 244607946 -8648637 - MLT1C LTR MaLR -52 415 132 739 191 0 0 chr2 244607981 244608107 -8648476 + FLAM_A SINE Alu 1 126 -7 1505 154 48 24 chr2 244608111 244608404 -8648179 + AluJo SINE Alu 1 300 -12 270 289 159 43 chr2 244608672 244608949 -8647634 + L2 LINE L2 2994 3302 -11 375 266 0 116 chr2 244609185 244609358 -8647225 - MIR SINE MIR 0 262 110 293 343 58 17 chr2 244609365 244609537 -8647046 - MIR SINE MIR -66 196 18 2933 157 97 20 chr2 244609569 244610214 -8646369 + L1MB8 LINE L1 5442 6169 -9 499 149 138 149 chr2 244610761 244610833 -8645750 + MER5A DNA MER1_type 4 75 -114 1924 145 7 3 chr2 244610833 244611143 -8645440 + AluJb SINE Alu 2 312 0 499 149 138 149 chr2 244611143 244611258 -8645325 + MER5A DNA MER1_type 75 189 0 875 236 92 17 chr2 244611470 244611763 -8644820 + LTR33A LTR ERVL 208 522 -1 259 333 177 16 chr2 244612478 244612670 -8643913 + L2 LINE L2 2959 3181 -91 428 258 52 77 chr2 244612713 244612907 -8643676 + MIR SINE MIR 71 259 -3 207 343 20 30 chr2 244612894 244612993 -8643590 + L2 LINE L2 3174 3271 -1 * 327 312 78 19 chr2 244614529 244614734 -8641849 - L2 LINE L2 -219 3053 2837 823 199 57 23 chr2 244615405 244615581 -8641002 - MER3 DNA MER1_type -13 196 15 2344 150 8 0 chr2 244615596 244615975 -8640608 + MLT1B LTR MaLR 9 390 0 182 328 31 0 chr2 244616421 244616485 -8640098 - L2 LINE L2 -632 2682 2617 2291 60 0 0 chr2 244616486 244616799 -8639784 + AluY SINE Alu 1 313 0 1458 122 35 113 chr2 244616942 244617115 -8639468 + L1MC3 LINE L1 7468 7602 -183 1031 107 0 47 chr2 244617115 244617284 -8639299 + L1PA15 LINE L1 6001 6161 -4 1458 122 35 113 chr2 244617284 244617455 -8639128 + L1MC3 LINE L1 7602 7785 0 963 242 36 20 chr2 244618131 244618360 -8638223 + L1MD2 LINE L1 6104 6339 -20 2145 106 0 3 chr2 244618360 244618662 -8637921 - AluSg SINE Alu -9 301 1 963 242 36 20 chr2 244618662 244618684 -8637899 + L1MD2 LINE L1 6339 6359 0 486 271 88 14 chr2 244618803 244618993 -8637590 + MIR SINE MIR 37 249 -13 2022 87 0 4 chr2 244620946 244621222 -8635361 + AluSq SINE Alu 1 275 -38 333 100 0 0 chr2 244621222 244621272 -8635311 + (GGAA)n Simple_repeat Simple_repeat 2 51 0 2062 128 10 3 chr2 244622411 244622717 -8633866 - AluSx SINE Alu -4 308 1 1976 112 0 0 chr2 244622849 244623109 -8633474 - AluSx SINE Alu -12 300 41 2405 92 0 0 chr2 244624117 244624411 -8632172 + AluSx SINE Alu 1 294 -18 353 244 26 17 chr2 244624959 244625074 -8631509 - L1MB7 LINE L1 0 6184 6069 2349 87 16 13 chr2 244625205 244625516 -8631067 + AluSx SINE Alu 1 312 0 1874 159 14 7 chr2 244625530 244625825 -8630758 + AluJo SINE Alu 1 297 -15 2291 105 0 16 chr2 244626447 244626751 -8629832 - AluSx SINE Alu -13 299 1 2438 143 7 19 chr2 244626753 244627186 -8629397 - L1MB5 LINE L1 -39 6135 5708 1124 128 0 0 chr2 244627277 244627455 -8629128 + AluSg/x SINE Alu 132 309 0 2105 144 0 0 chr2 244627475 244627774 -8628809 + AluSx SINE Alu 2 300 -12 201 39 0 0 chr2 244627810 244627836 -8628747 + (CA)n Simple_repeat Simple_repeat 1 26 0 2340 103 0 0 chr2 244628331 244628623 -8627960 + AluSx SINE Alu 1 292 -20 2127 100 46 0 chr2 244628626 244628907 -8627676 + AluSq SINE Alu 1 294 -19 229 261 77 0 chr2 244630496 244630561 -8626022 + L2 LINE L2 3201 3270 -2 212 266 0 47 chr2 244630628 244630692 -8625891 - L2 LINE L2 -2 3270 3210 2002 143 3 3 chr2 244631049 244631349 -8625234 + AluSx SINE Alu 1 300 -12 1961 169 0 0 chr2 244631478 244631774 -8624809 - AluJo SINE Alu -16 296 1 384 302 22 14 chr2 244631913 244632038 -8624545 + MIR SINE MIR 64 192 -70 2337 107 3 19 chr2 244632038 244632355 -8624228 - AluSx SINE Alu 0 312 1 384 302 22 14 chr2 244632355 244632368 -8624215 + MIR SINE MIR 192 203 -59 228 67 0 0 chr2 244632982 244633012 -8623571 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 629 321 101 8 chr2 244633077 244633314 -8623269 - MIR SINE MIR 0 262 4 208 274 71 53 chr2 244634349 244634462 -8622121 - MIR SINE MIR -22 240 126 2200 103 3 7 chr2 244635492 244635625 -8620958 + AluSx SINE Alu 1 133 -179 2459 85 0 3 chr2 244635625 244635931 -8620652 + AluSq SINE Alu 1 305 -8 2200 103 3 7 chr2 244635931 244636087 -8620496 + AluSx SINE Alu 133 289 -23 697 237 71 0 chr2 244637319 244637488 -8619095 + MIR SINE MIR 8 188 -74 830 114 0 46 chr2 244637527 244637658 -8618925 - FLAM_C SINE Alu -8 125 1 2029 106 4 7 chr2 244637758 244638032 -8618551 + AluSx SINE Alu 3 275 -37 672 48 0 0 chr2 244638036 244638120 -8618463 + (GGAA)n Simple_repeat Simple_repeat 3 86 0 244 223 213 0 chr2 244638208 244638302 -8618281 - MER81 DNA DNA 0 114 1 206 327 10 69 chr2 244638771 244638872 -8617711 + L3 LINE CR1 1473 1567 -10 733 201 14 79 chr2 244640577 244640738 -8615845 + L1MB4 LINE L1 5979 6094 -86 2436 70 13 25 chr2 244640738 244641052 -8615531 + AluSx SINE Alu 1 310 -2 733 201 14 79 chr2 244641052 244641134 -8615449 + L1MB4 LINE L1 6094 6180 0 298 239 122 67 chr2 244641916 244641983 -8614600 - Charlie8 DNA MER1_type -2197 220 158 2353 103 0 3 chr2 244641983 244642283 -8614300 - AluSg SINE Alu -11 299 1 298 239 122 67 chr2 244642283 244642395 -8614188 - Charlie8 DNA MER1_type -2259 158 31 940 153 92 6 chr2 244643202 244643365 -8613218 - AluSc SINE Alu -1 308 132 2109 91 80 0 chr2 244643365 244643639 -8612944 - AluSx SINE Alu -12 300 5 263 234 65 0 chr2 244643645 244643722 -8612861 + MER112 DNA MER1_type 148 229 -31 540 268 180 42 chr2 244643975 244644166 -8612417 + L2 LINE L2 2648 2811 -502 1983 144 16 16 chr2 244644166 244644472 -8612111 - AluJb SINE Alu -6 306 1 540 268 180 42 chr2 244644472 244644793 -8611790 + L2 LINE L2 2811 3236 -77 376 230 10 20 chr2 244644793 244644893 -8611690 + L1MC5 LINE L1 7815 7913 -48 2315 96 3 0 chr2 244644924 244645217 -8611366 + AluSp SINE Alu 1 294 -19 1938 165 0 0 chr2 244645234 244645525 -8611058 + AluSx SINE Alu 7 297 -15 369 60 0 0 chr2 244645843 244645893 -8610690 - AluSx SINE Alu -11 290 241 1279 149 0 0 chr2 244645893 244646068 -8610515 - AluSx SINE Alu -137 175 1 304 254 14 0 chr2 244646256 244646327 -8610256 - L1MC/D LINE L1 -2042 5766 5695 300 329 73 0 chr2 244646339 244646377 -8610206 - L1MC/D LINE L1 -458 5663 5629 1902 73 34 0 chr2 244646377 244646549 -8610034 - AluY SINE Alu -6 305 121 459 0 0 0 chr2 244646549 244646600 -8609983 + (TG)n Simple_repeat Simple_repeat 2 52 0 1902 73 34 0 chr2 244646600 244646661 -8609922 - AluY SINE Alu -190 121 64 300 329 73 0 chr2 244646661 244646759 -8609824 - L1MC/D LINE L1 -492 5629 5517 1781 191 10 5 chr2 244646799 244647192 -8609391 - L1MB3 LINE L1 -7 6176 5782 842 249 80 99 chr2 244649914 244650054 -8606529 - L1ME4a LINE L1 -5 6116 5975 1527 157 12 102 chr2 244650054 244650201 -8606382 + AluJb SINE Alu 1 105 -207 1470 142 4 30 chr2 244650201 244650434 -8606149 + AluJb SINE Alu 86 312 0 1527 157 12 102 chr2 244650434 244650610 -8605973 + AluJb SINE Alu 105 295 -17 842 249 80 99 chr2 244650610 244651092 -8605491 - L1ME4a LINE L1 -146 5975 5506 677 211 20 0 chr2 244651093 244651245 -8605338 - L1MD2 LINE L1 -2 6357 6203 1038 189 246 105 chr2 244651254 244651426 -8605157 - L1MB3 LINE L1 -488 5754 5608 1854 137 0 0 chr2 244651426 244651675 -8604908 + AluJb SINE Alu 2 250 -62 312 23 0 23 chr2 244651675 244651719 -8604864 - MADE1 DNA Mariner -37 43 1 1038 189 246 105 chr2 244651719 244651941 -8604642 - L1MB3 LINE L1 -633 5609 5254 2435 99 3 0 chr2 244651976 244652288 -8604295 + AluSq SINE Alu 1 313 0 227 151 0 94 chr2 244652317 244652370 -8604213 - L1ME4a LINE L1 -678 5443 5396 2391 82 16 13 chr2 244652589 244652893 -8603690 + AluSg SINE Alu 3 307 -3 2464 109 0 0 chr2 244652994 244653305 -8603278 + AluSx SINE Alu 1 311 -1 2083 131 0 7 chr2 244654350 244654641 -8601942 - AluJb SINE Alu -15 297 9 1119 145 20 182 chr2 244654719 244655071 -8601512 + AluJb SINE Alu 1 295 -7 208 345 78 26 chr2 244655196 244655387 -8601196 + L2 LINE L2 2822 3022 -250 369 259 92 30 chr2 244656073 244656204 -8600379 - MIR SINE MIR -5 257 119 2553 73 0 0 chr2 244656441 244656742 -8599841 - AluSp SINE Alu -12 301 1 571 244 86 64 chr2 244656974 244657208 -8599375 + MLT1L LTR MaLR 21 259 -356 2430 90 10 0 chr2 244657779 244658079 -8598504 + AluSx SINE Alu 1 303 -9 1130 160 146 4 chr2 244658096 244658364 -8598219 + MER33 DNA MER1_type 1 306 -18 2052 115 20 3 chr2 244658923 244659218 -8597365 - AluSx SINE Alu -12 300 1 719 178 0 44 chr2 244659859 244659994 -8596589 + FLAM_C SINE Alu 1 129 -4 1706 166 10 40 chr2 244660103 244660405 -8596178 - AluJo SINE Alu -16 296 4 539 167 0 0 chr2 244661320 244661422 -8595161 - AluSg/x SINE Alu 0 312 211 1951 124 4 0 chr2 244661422 244661681 -8594902 - AluSq SINE Alu -53 260 1 454 330 92 35 chr2 244661815 244662008 -8594575 + L2 LINE L2 2887 3067 -205 1919 127 80 0 chr2 244662008 244662284 -8594299 - AluSg SINE Alu -12 298 1 454 330 92 35 chr2 244662284 244662438 -8594145 + L2 LINE L2 3067 3254 -18 606 231 157 17 chr2 244662549 244662683 -8593900 + L2 LINE L2 2737 2851 -462 2053 151 0 3 chr2 244662683 244662981 -8593602 - AluJo SINE Alu -15 297 1 606 231 157 17 chr2 244662981 244663160 -8593423 + L2 LINE L2 2851 3082 -231 2546 73 3 0 chr2 244663465 244663767 -8592816 + AluSg SINE Alu 1 303 -7 186 275 0 0 chr2 244664015 244664084 -8592499 + (CATA)n Simple_repeat Simple_repeat 2 70 0 996 138 5 63 chr2 244664262 244664434 -8592149 + AluJb SINE Alu 122 302 -10 211 28 56 0 chr2 244664434 244664470 -8592113 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 1481 196 15 4 chr2 244664477 244664737 -8591846 + AluJb SINE Alu 1 263 -49 1974 124 25 41 chr2 244664752 244665066 -8591517 + AluSx SINE Alu 1 309 -3 2146 105 34 0 chr2 244665471 244665765 -8590818 + AluSq SINE Alu 1 304 -9 625 239 92 25 chr2 244665878 244666117 -8590466 - L1ME1 LINE L1 -10 6156 5902 343 324 91 0 chr2 244666094 244666304 -8590279 - L1MC4 LINE L1 -1 8041 7813 * 208 181 19 57 chr2 244667088 244667193 -8589390 + (TTA)n Simple_repeat Simple_repeat 3 103 0 515 98 98 0 chr2 244667947 244668039 -8588544 + L1MB5 LINE L1 6059 6159 -15 2191 125 0 0 chr2 244668041 244668338 -8588245 - AluJb SINE Alu -15 297 1 2489 65 0 3 chr2 244669000 244669292 -8587291 + AluY SINE Alu 2 292 -19 180 0 0 0 chr2 244669332 244669352 -8587231 + (CTTG)n Simple_repeat Simple_repeat 3 22 0 352 206 152 0 chr2 244669412 244669504 -8587079 + MLT1H LTR MaLR 439 544 -5 2009 93 11 0 chr2 244670151 244670430 -8586153 - AluY SINE Alu -3 308 27 1492 171 33 10 chr2 244670873 244671178 -8585405 + AluJb SINE Alu 1 312 0 1215 138 33 0 chr2 244671420 244671630 -8584953 + AluJb SINE Alu 91 307 -5 1082 181 108 8 chr2 244671645 244671894 -8584689 + AluJb SINE Alu 12 285 -27 507 134 0 0 chr2 244671895 244671977 -8584606 + (CA)n Simple_repeat Simple_repeat 2 83 0 848 146 56 0 chr2 244672270 244672414 -8584169 - FRAM SINE Alu -17 159 8 339 368 8 0 chr2 244677146 244677263 -8579320 + MIR3 SINE MIR 78 195 -13 207 434 33 0 chr2 244677938 244678060 -8578523 + L2 LINE L2 3137 3262 -10 1521 170 11 21 chr2 244678894 244679176 -8577407 + AluJb SINE Alu 1 279 -33 288 0 0 0 chr2 244679176 244679208 -8577375 + (CA)n Simple_repeat Simple_repeat 1 32 0 1248 169 16 16 chr2 244680015 244680257 -8576326 + AluJo SINE Alu 12 253 -59 323 185 31 0 chr2 244680523 244680588 -8575995 + HsTC2 DNA Tc2 1231 1297 -601 2212 114 0 0 chr2 244680693 244680990 -8575593 - AluSq SINE Alu -16 297 1 337 200 15 0 chr2 244681140 244681205 -8575378 - MER47A DNA MER2_type 0 366 301 2427 66 0 0 chr2 244681661 244681964 -8574619 + AluY SINE Alu 1 303 -8 2059 92 26 20 chr2 244683816 244683954 -8572629 + AluSq SINE Alu 1 137 -176 2067 114 0 19 chr2 244683954 244684271 -8572312 + AluY SINE Alu 1 311 0 2059 92 26 20 chr2 244684271 244684438 -8572145 + AluSq SINE Alu 137 308 -5 2143 93 10 13 chr2 244684442 244684742 -8571841 + AluSg SINE Alu 1 299 -11 1952 105 77 0 chr2 244684750 244685035 -8571548 + AluSq SINE Alu 2 308 -5 29 0 0 0 chr2 244685100 244685129 -8571454 + AT_rich Low_complexity Low_complexity 1 29 0 319 288 96 48 chr2 244686560 244686685 -8569898 - L2 LINE L2 -8 3264 3134 1369 173 0 26 chr2 244689393 244689659 -8566924 - AluJo SINE Alu -19 293 35 263 363 30 65 chr2 244689922 244690123 -8566460 + MIR SINE MIR 19 212 -50 187 250 150 0 chr2 244691574 244691634 -8564949 + MIR SINE MIR 75 143 -119 1477 184 11 18 chr2 244691809 244692087 -8564496 + AluJb SINE Alu 1 276 -36 199 262 111 100 chr2 244692880 244693151 -8563432 - L3 LINE CR1 -1 1576 1303 2208 82 3 0 chr2 244697008 244697319 -8559264 + AluSp SINE Alu 1 312 0 227 260 52 39 chr2 244697333 244697410 -8559173 + MIR SINE MIR 47 124 -138 266 242 0 15 chr2 244698134 244698200 -8558383 + L1ME LINE L1 5616 5680 -441 541 70 0 23 chr2 244698370 244698456 -8558127 + AluJ/FRAM SINE Alu 228 311 -1 908 144 38 141 chr2 244698949 244699212 -8557371 - MER46A DNA MER2_type 0 236 1 563 276 44 11 chr2 244699238 244699419 -8557164 - MIR SINE MIR -2 260 74 1865 134 0 11 chr2 244700128 244700412 -8556171 - AluSx SINE Alu -31 281 1 339 207 211 24 chr2 244701010 244701218 -8555365 - L1ME4a LINE L1 -39 6082 5836 1960 140 3 0 chr2 244701218 244701518 -8555065 - AluSx SINE Alu -11 301 1 1891 173 25 23 chr2 244701548 244701947 -8554636 - L1MA4 LINE L1 -244 6056 5657 1448 185 3 72 chr2 244702112 244702431 -8554152 - AluJo SINE Alu -4 298 2 2150 101 7 0 chr2 244702818 244703114 -8553469 + AluSx SINE Alu 1 298 -14 1820 277 134 14 chr2 244705841 244706721 -8549862 - L2 LINE L2 -166 3147 2165 404 150 0 0 chr2 244707198 244707258 -8549325 - FLAM SINE Alu -12 121 62 2216 70 33 0 chr2 244707331 244707630 -8548953 + AluY SINE Alu 1 309 -2 298 304 59 30 chr2 244707992 244708127 -8548456 - MER5A DNA MER1_type -30 159 21 845 215 52 0 chr2 244708149 244708321 -8548262 - MER5A DNA MER1_type -2 187 7 269 304 61 26 chr2 244708559 244708674 -8547909 + L2 LINE L2 3136 3254 -18 2333 211 28 12 chr2 244709059 244709552 -8547031 + LTR31 LTR ERV1 104 604 -15 1693 149 3 14 chr2 244709587 244709876 -8546707 + AluJb SINE Alu 3 288 -24 197 77 51 0 chr2 244710528 244710567 -8546016 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 2198 89 7 0 chr2 244710567 244710859 -8545724 - AluSg1 SINE Alu -14 295 2 1708 147 101 7 chr2 244710947 244711253 -8545330 - MER47A DNA MER2_type -2 364 30 2114 75 0 0 chr2 244711256 244711575 -8545008 + AluY SINE Alu 1 319 0 2053 119 6 22 chr2 244711589 244711900 -8544683 + AluSx SINE Alu 7 312 0 250 205 0 0 chr2 244711900 244711939 -8544644 - MER47A DNA MER2_type -327 39 1 265 289 117 16 chr2 244713120 244713248 -8543335 - L2 LINE L2 -842 2472 2332 1741 124 36 0 chr2 244713330 244713636 -8542947 + AluSx SINE Alu 12 312 0 223 186 57 71 chr2 244714535 244714605 -8541978 - MIR SINE MIR -94 168 100 459 230 79 84 chr2 244714916 244714939 -8541644 + MIR SINE MIR 46 68 -194 2159 121 0 3 chr2 244714939 244715252 -8541331 + AluSx SINE Alu 1 312 0 459 230 79 84 chr2 244715252 244715406 -8541177 + MIR SINE MIR 68 222 -40 231 262 33 0 chr2 244715402 244715463 -8541120 - MER5B DNA MER1_type -5 173 111 * 499 215 41 8 chr2 244715506 244715627 -8540956 - MER5B DNA MER1_type -53 125 1 1657 123 11 32 chr2 244715897 244716181 -8540402 + AluJo SINE Alu 1 278 -34 583 298 19 0 chr2 244717247 244717408 -8539175 + MIR SINE MIR 75 238 -24 2260 130 171 2 chr2 244717450 244717866 -8538717 + LTR19A LTR ERV1 1 486 0 1697 155 7 35 chr2 244718624 244718914 -8537669 + AluJb SINE Alu 1 282 -30 271 205 68 184 chr2 244718962 244719152 -8537431 + L1ME LINE L1 5623 5790 -331 588 296 59 92 chr2 244719291 244719747 -8536836 + L2 LINE L2 2832 3272 0 2410 88 0 3 chr2 244719887 244720184 -8536399 + AluSx SINE Alu 1 296 -16 905 284 36 16 chr2 244720256 244720506 -8536077 - MIR SINE MIR 0 262 8 2172 123 0 3 chr2 244721676 244721994 -8534589 - AluSx SINE Alu 0 317 1 1695 124 132 0 chr2 244722227 244722370 -8534213 - AluJb SINE Alu -1 301 178 216 0 0 0 chr2 244722370 244722394 -8534189 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1695 124 132 0 chr2 244722394 244722515 -8534068 - AluJb SINE Alu -124 178 2 2311 115 0 3 chr2 244722528 244722840 -8533743 - AluSx SINE Alu -1 311 1 607 226 89 42 chr2 244723122 244723272 -8533311 - MIR SINE MIR 0 262 100 2230 112 3 7 chr2 244723272 244723567 -8533016 + AluSq SINE Alu 1 294 -19 607 226 89 42 chr2 244723567 244723606 -8532977 - MIR SINE MIR -162 100 64 231 344 56 0 chr2 244723606 244723696 -8532887 - MIR SINE MIR -161 101 7 218 259 0 12 chr2 244724255 244724340 -8532243 + CT-rich Low_complexity Low_complexity 2 85 0 2173 123 3 19 chr2 244724340 244724657 -8531926 - AluSx SINE Alu 0 312 1 330 288 80 57 chr2 244724806 244725105 -8531478 + MLT1K LTR MaLR 283 588 0 2363 99 3 0 chr2 244725441 244725744 -8530839 + AluSx SINE Alu 1 304 -8 2012 148 6 28 chr2 244726725 244727043 -8529540 - AluSx SINE Alu -1 311 1 2439 101 3 0 chr2 244727051 244727357 -8529226 - AluSp SINE Alu -4 309 3 246 250 50 0 chr2 244727858 244727918 -8528665 + MER58 DNA MER1_type 1 63 -323 553 161 35 0 chr2 244727939 244728026 -8528557 + FRAM SINE Alu 40 129 -47 364 261 0 33 chr2 244728034 244728126 -8528457 - L1MC4 LINE L1 -1340 6702 6614 350 260 17 13 chr2 244728172 244728284 -8528299 + L1MC4 LINE L1 1995 6983 -1339 708 251 193 13 chr2 244728311 244728694 -8527889 - MLT1L LTR MaLR -77 538 87 560 276 64 20 chr2 244728782 244728997 -8527586 + MLT1F1 LTR MaLR 76 296 -294 360 0 0 0 chr2 244729008 244729046 -8527537 + (CA)n Simple_repeat Simple_repeat 1 78 0 360 0 0 0 chr2 244729046 244729086 -8527497 + (CA)n Simple_repeat Simple_repeat 2 41 0 594 167 133 33 chr2 244729194 244729374 -8527209 + MLT1F1 LTR MaLR 365 562 -5 265 286 0 13 chr2 244729377 244729454 -8527129 - MLT1L LTR MaLR -531 84 9 2585 28 0 0 chr2 244729676 244729960 -8526623 + AluYb8 SINE Alu 35 318 0 266 327 80 9 chr2 244730013 244730126 -8526457 - MIR SINE MIR -10 252 132 328 233 89 18 chr2 244730144 244730290 -8526293 + MIR SINE MIR 48 262 0 * 407 258 80 31 chr2 244730254 244730417 -8526166 - MIR SINE MIR -83 179 9 1317 280 34 16 chr2 244730449 244730669 -8525914 + LTR16B LTR ERVL 1 216 -248 2227 145 0 57 chr2 244730669 244731056 -8525527 + MLT1A1 LTR MaLR 1 365 0 1317 280 34 16 chr2 244731056 244731282 -8525301 + LTR16B LTR ERVL 216 455 -9 2435 104 3 0 chr2 244731756 244732064 -8524519 - AluSx SINE Alu -3 309 1 193 255 0 0 chr2 244732144 244732191 -8524392 - MIR3 SINE MIR -5 203 157 2222 108 3 40 chr2 244732772 244733096 -8523487 - AluSx SINE Alu 0 312 1 21 0 0 0 chr2 244733098 244733119 -8523464 + AT_rich Low_complexity Low_complexity 1 21 0 2322 86 0 32 chr2 244733549 244733886 -8522697 + AluSx SINE Alu 1 312 0 334 304 71 26 chr2 244734017 244734364 -8522219 - L1ME LINE L1 -450 5671 5316 326 261 113 56 chr2 244734978 244735120 -8521463 - L2 LINE L2 -5 3308 3159 185 0 40 0 chr2 244735128 244735153 -8521430 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2246 123 0 0 chr2 244735157 244735459 -8521124 + AluSc SINE Alu 1 302 -7 544 252 27 84 chr2 244735473 244735634 -8520949 - L2 LINE L2 -136 3177 3035 2253 113 0 13 chr2 244735634 244735936 -8520647 + AluSx SINE Alu 1 298 -14 544 252 27 84 chr2 244735936 244736036 -8520547 - L2 LINE L2 -278 3035 2931 502 264 61 38 chr2 244736041 244736402 -8520181 + LTR16A1 LTR ERVL 3 457 0 250 308 0 0 chr2 244736402 244736467 -8520116 - L2 LINE L2 -379 2935 2871 1460 223 8 58 chr2 244736740 244736894 -8519689 + MLT1A2 LTR MaLR 1 161 -213 2495 90 0 3 chr2 244736894 244737205 -8519378 + AluSx SINE Alu 3 312 0 1460 223 8 58 chr2 244737205 244737444 -8519139 + MLT1A2 LTR MaLR 161 374 0 2146 122 30 0 chr2 244737890 244738218 -8518365 - AluSx SINE Alu 0 337 1 309 246 118 18 chr2 244738229 244738339 -8518244 + MIR SINE MIR 82 202 -60 786 144 72 22 chr2 244738730 244738869 -8517714 - AluJo SINE Alu -165 147 2 206 279 0 49 chr2 244738874 244738935 -8517648 + MER5A DNA MER1_type 129 186 -3 2294 97 0 0 chr2 244739072 244739362 -8517221 - AluSx SINE Alu -14 298 9 234 0 0 0 chr2 244739394 244739420 -8517163 + (A)n Simple_repeat Simple_repeat 1 26 0 2294 97 0 0 chr2 244740273 244740563 -8516020 - AluSx SINE Alu -14 298 9 234 0 0 0 chr2 244740595 244740621 -8515962 + (A)n Simple_repeat Simple_repeat 1 26 0 213 286 48 71 chr2 244741609 244741693 -8514890 - MIR3 SINE MIR -124 84 3 671 267 27 21 chr2 244741727 244741914 -8514669 + MER5A DNA MER1_type 1 188 -1 2295 127 0 0 chr2 244742377 244742685 -8513898 + AluSq SINE Alu 1 308 -5 808 291 120 24 chr2 244742727 244743184 -8513399 + LTR33 LTR ERVL 1 501 -20 1274 246 123 28 chr2 244743710 244743883 -8512700 + MLT1G1 LTR MaLR 1 156 -439 869 97 0 24 chr2 244743883 244744048 -8512535 + (TC)n Simple_repeat Simple_repeat 1 161 0 1274 246 123 28 chr2 244744048 244744381 -8512202 + MLT1G1 LTR MaLR 156 595 0 1983 154 3 7 chr2 244744538 244744836 -8511747 + AluJo SINE Alu 1 297 -15 528 168 0 104 chr2 244745569 244745652 -8510931 + FRAM SINE Alu 61 151 -161 180 0 0 0 chr2 244745652 244745672 -8510911 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1718 163 10 21 chr2 244745675 244745963 -8510620 - AluJb SINE Alu -27 285 1 528 168 0 104 chr2 244745963 244746000 -8510583 + FRAM SINE Alu 153 172 -4 901 285 70 40 chr2 244746230 244746314 -8510269 - L1MEc LINE L1 -4324 2072 1992 2382 105 0 9 chr2 244746314 244746629 -8509954 + AluSx SINE Alu 1 312 0 901 285 70 40 chr2 244746629 244747014 -8509569 - L1MEc LINE L1 -4404 1992 1589 420 237 98 67 chr2 244746996 244747079 -8509504 - L1MEc LINE L1 -5206 999 920 * 2353 60 43 0 chr2 244747079 244747361 -8509222 + AluY SINE Alu 1 294 -17 420 237 98 67 chr2 244747361 244747635 -8508948 - L1MEc LINE L1 -5285 920 631 1894 219 73 66 chr2 244747901 244748450 -8508133 + MLT2B3 LTR ERVL 2 554 0 637 147 74 18 chr2 244748511 244748674 -8507909 - MER53 DNA DNA 0 189 18 2337 141 73 39 chr2 244749006 244749445 -8507138 - LTR32 LTR ERVL -4 467 14 1881 219 47 38 chr2 244749666 244750010 -8506573 + MER87 LTR ERV1 55 398 -143 2294 125 0 0 chr2 244750010 244750315 -8506268 - AluSx SINE Alu -7 305 1 1881 219 47 38 chr2 244750315 244750450 -8506133 + MER87 LTR ERV1 398 530 -11 296 256 128 17 chr2 244750471 244750588 -8505995 + L2 LINE L2 2871 3000 -272 279 218 128 103 chr2 244750749 244750906 -8505677 + LTR16C LTR ERVL 84 251 -240 1805 155 7 21 chr2 244750906 244751197 -8505386 - AluJo SINE Alu -23 289 3 279 218 128 103 chr2 244751197 244751282 -8505301 + LTR16C LTR ERVL 251 332 -159 942 118 17 62 chr2 244751303 244751481 -8505102 - LTR9 LTR ERV1 0 612 443 469 81 0 0 chr2 244751485 244751547 -8505036 + Alu SINE Alu 173 234 -76 284 111 0 0 chr2 244751554 244751599 -8504984 - LTR7 LTR ERV1 -405 45 1 * 2257 99 99 21 chr2 244751599 244751981 -8504602 + LTR9 LTR ERV1 26 437 -175 437 63 0 0 chr2 244751983 244752046 -8504537 - Alu SINE Alu -9 300 238 698 127 0 18 chr2 244752058 244752168 -8504415 + LTR7 LTR ERV1 343 450 0 2311 98 5 27 chr2 244752174 244752542 -8504041 + HERVH LTR ERV1 3634 3993 -3720 6140 114 21 3 chr2 244752561 244753513 -8503070 + HERVH LTR ERV1 3951 4915 -2287 1396 195 4 0 chr2 244753510 244753777 -8502806 + HERVH LTR ERV1 5749 6016 -1697 * 3476 108 22 0 chr2 244753770 244754315 -8502268 + HERVH LTR ERV1 7157 7713 0 741 119 87 0 chr2 244754315 244754441 -8502142 + LTR7 LTR ERV1 1 137 -313 476 164 142 37 chr2 244754934 244755068 -8501515 + LTR7 LTR ERV1 303 450 0 2068 119 11 0 chr2 244755084 244755369 -8501214 - AluSg SINE Alu -21 289 2 574 163 30 37 chr2 244755391 244755526 -8501057 + LTR16C LTR ERVL 354 487 -4 1140 190 114 64 chr2 244755824 244756246 -8500337 + LTR7 LTR ERV1 1 443 -7 2273 107 3 3 chr2 244756319 244756629 -8499954 - AluSg SINE Alu 0 310 1 425 228 138 0 chr2 244756831 244756976 -8499607 + MER20 DNA MER1_type 55 219 0 604 247 71 94 chr2 244757462 244757544 -8499039 - MIR SINE MIR -2 260 178 2357 61 4 0 chr2 244757544 244757866 -8498717 + AluY SINE Alu 3 325 0 604 247 71 94 chr2 244757866 244758037 -8498546 - MIR SINE MIR -84 178 12 247 184 0 0 chr2 244758246 244758284 -8498299 - MIR SINE MIR -213 49 12 509 329 66 9 chr2 244759395 244759608 -8496975 - MIR SINE MIR -10 252 28 255 260 0 0 chr2 244762745 244762795 -8493788 + MIR SINE MIR 202 251 -11 201 39 0 0 chr2 244762799 244762825 -8493758 + (TTA)n Simple_repeat Simple_repeat 3 28 0 993 177 0 0 chr2 244763331 244763489 -8493094 - FRAM SINE Alu -20 156 1 231 94 38 19 chr2 244763495 244763548 -8493035 + (TA)n Simple_repeat Simple_repeat 2 55 0 21 0 0 0 chr2 244763581 244763602 -8492981 + AT_rich Low_complexity Low_complexity 1 21 0 552 230 164 13 chr2 244763650 244763778 -8492805 - MIR SINE MIR -77 185 29 2368 102 0 0 chr2 244763778 244764071 -8492512 - AluSx SINE Alu -19 293 1 552 230 164 13 chr2 244764071 244764094 -8492489 - MIR SINE MIR -233 29 11 354 236 11 0 chr2 244964190 244964279 -8292304 - L1M4 LINE L1 -866 5280 5191 391 257 64 53 chr2 244964406 244964593 -8291990 - L1MC/D LINE L1 -800 5559 5371 1752 181 4 0 chr2 244964667 244964944 -8291639 + AluJo SINE Alu 1 278 -34 389 227 35 35 chr2 244965058 244965199 -8291384 - MLT1K LTR MaLR -72 516 376 1688 234 74 31 chr2 244965364 244965821 -8290762 + MER21B LTR ERV1 313 789 -74 11961 60 7 16 chr2 244966938 244969294 -8287289 + L1PA6 LINE L1 3784 6120 -34 3229 229 35 33 chr2 244969395 244970462 -8286121 - L1ME1 LINE L1 -92 6074 5006 299 263 66 7 chr2 244970550 244970687 -8285896 + L2 LINE L2 2136 2280 -1034 2909 129 64 0 chr2 244971470 244971921 -8284662 - LTR39 LTR ERV1 -303 480 1 354 45 0 0 chr2 244972672 244972716 -8283867 + (CA)n Simple_repeat Simple_repeat 2 45 0 233 185 74 0 chr2 244974037 244974091 -8282492 + MST-int LTR MaLR 217 274 -1377 1951 157 16 47 chr2 244974211 244974594 -8281989 + THE1C LTR MaLR 5 375 0 9966 116 50 14 chr2 244974595 244976119 -8280464 + THE1C-int LTR MaLR 2 1580 0 2016 128 20 76 chr2 244976119 244976516 -8280067 + THE1C LTR MaLR 1 375 0 531 184 92 107 chr2 244977149 244977384 -8279199 + AluJo SINE Alu 90 321 0 247 280 67 0 chr2 244978479 244978554 -8278029 + MLT1D LTR MaLR 346 425 -80 1248 203 77 7 chr2 244981290 244981576 -8275007 - MER33 DNA MER1_type -6 318 13 1899 157 0 30 chr2 244981628 244981928 -8274655 - AluSx SINE Alu -16 296 6 434 169 13 0 chr2 244982167 244982244 -8274339 + FLAM_A SINE Alu 1 78 -54 222 118 0 0 chr2 244982261 244982295 -8274288 + (ATTG)n Simple_repeat Simple_repeat 2 35 0 839 231 28 19 chr2 244982485 244982701 -8273882 - MLT1D LTR MaLR -287 218 1 284 276 79 24 chr2 244982868 244982995 -8273588 - L1M4 LINE L1 -944 5202 5069 304 221 53 0 chr2 244983129 244983224 -8273359 + L2 LINE L2 2181 2280 -1034 1947 138 3 20 chr2 244987020 244987324 -8269259 - AluSx SINE Alu -11 301 3 193 294 44 15 chr2 244987661 244987729 -8268854 + MIR SINE MIR 31 100 -162 2503 123 0 0 chr2 244988472 244988821 -8267762 - Tigger2 DNA MER2_type -238 2480 2132 2216 122 7 0 chr2 244988826 244989122 -8267461 - AluSx SINE Alu -14 298 1 7076 64 13 42 chr2 244989136 244990847 -8265736 - SVA Other Other -683 1386 1 270 293 0 0 chr2 244990847 244990929 -8265654 + GA-rich Low_complexity Low_complexity 2 83 0 1442 193 16 14 chr2 244991020 244991355 -8265228 - MER33 DNA MER1_type 0 324 1 1690 189 0 0 chr2 244991506 244991791 -8264792 + AluJb SINE Alu 11 295 -17 440 195 46 0 chr2 244991849 244991936 -8264647 + AluJo SINE Alu 124 214 -98 912 232 24 10 chr2 244992165 244992372 -8264211 - MLT1D LTR MaLR -295 210 1 391 274 111 29 chr2 244992521 244992729 -8263854 - L1M4 LINE L1 -922 5224 5000 249 243 125 15 chr2 244992755 244992891 -8263692 + L2 LINE L2 2130 2280 -1034 22 35 0 0 chr2 244995653 244995682 -8260901 + AT_rich Low_complexity Low_complexity 1 29 0 1607 154 3 11 chr2 244996350 244996629 -8259954 - L1MA4 LINE L1 -3 6297 6019 2441 92 0 0 chr2 244996629 244996932 -8259651 - AluSc SINE Alu -6 303 1 1450 156 21 7 chr2 244997025 244997307 -8259276 - L1MA4 LINE L1 -236 6064 5779 1062 168 34 34 chr2 244997329 244997538 -8259045 - MER21B LTR ERV1 -6 857 649 1245 136 82 5 chr2 244997553 244997600 -8258983 + L1MB5 LINE L1 5545 5587 -713 180 0 0 0 chr2 244997600 244997620 -8258963 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 1245 136 82 5 chr2 244997620 244997792 -8258791 + L1MB5 LINE L1 5587 5781 -519 315 200 0 0 chr2 244997795 244997850 -8258733 + MER21B LTR ERV1 1 55 -808 7017 174 53 10 chr2 244997850 244999328 -8257255 - L1M4 LINE L1 -1704 4442 2902 537 199 86 0 chr2 244999803 244999939 -8256644 + L1MB5 LINE L1 6035 6184 0 678 237 50 55 chr2 245001322 245001541 -8255042 + MER20 DNA MER1_type 2 219 0 5161 46 5 2 chr2 245002233 245002858 -8253725 - L1PA4 LINE L1 -3 6152 5526 5801 31 7 4 chr2 245002859 245003572 -8253011 + L1P LINE L1 2494 3208 -2938 929 186 28 13 chr2 245003569 245003798 -8252785 - L1MB8 LINE L1 -65 6349 6103 * 2797 231 45 26 chr2 245003799 245004596 -8251987 - L1MB8 LINE L1 -1824 4558 3747 2235 97 0 7 chr2 245004698 245004996 -8251587 + AluSq SINE Alu 1 296 -17 321 277 28 25 chr2 245005034 245005242 -8251341 - L1MB8 LINE L1 -4539 1843 1674 436 193 55 198 chr2 245005597 245005691 -8250892 - MER45A DNA AcHobo -1406 175 124 1576 158 0 27 chr2 245005691 245005950 -8250633 + AluSx SINE Alu 40 291 -21 436 193 55 198 chr2 245005950 245006057 -8250526 - MER45A DNA AcHobo -1457 124 3 808 294 44 4 chr2 245006765 245006993 -8249590 - MER70B LTR ERVL -143 435 199 1149 121 0 0 chr2 245007094 245007259 -8249324 - L1PA11 LINE L1 -1 6173 6009 1068 206 66 54 chr2 245007314 245007649 -8248934 - L1ME3A LINE L1 -208 5962 5624 1237 202 41 34 chr2 245007751 245008018 -8248565 - Charlie1b DNA MER1_type -253 270 2 938 206 109 40 chr2 245008028 245008349 -8248234 + MER2 DNA MER2_type 2 344 0 290 25 0 25 chr2 245009370 245009410 -8247173 + (TA)n Simple_repeat Simple_repeat 2 40 0 226 353 51 51 chr2 245009823 245009979 -8246604 + L2 LINE L2 3117 3272 0 2855 156 13 4 chr2 245010874 245011336 -8245247 - MER101 LTR ERV1 0 474 9 222 210 145 0 chr2 245013644 245013706 -8242877 - L2 LINE L2 -229 3084 3014 184 297 16 16 chr2 245013712 245013776 -8242807 - L2 LINE L2 0 3313 3250 21 0 0 0 chr2 245013852 245013873 -8242710 + AT_rich Low_complexity Low_complexity 1 21 0 * 255 289 71 66 chr2 245013858 245014055 -8242528 + L2 LINE L2 3097 3294 -19 217 241 0 37 chr2 245014057 245014111 -8242472 + L2 LINE L2 3262 3313 0 278 307 91 27 chr2 245014650 245014979 -8241604 - L1M4 LINE L1 -1906 4240 3891 391 333 79 5 chr2 245015006 245015222 -8241361 - L1M4 LINE L1 -3662 2484 2253 491 196 33 0 chr2 245016917 245017009 -8239574 - MER81 DNA DNA 0 114 20 3522 82 7 0 chr2 245017053 245017515 -8239068 + L1PA8A LINE L1 5603 6067 -64 302 0 0 26 chr2 245017528 245017567 -8239016 + (TAA)n Simple_repeat Simple_repeat 2 39 0 4545 131 12 62 chr2 245017653 245018479 -8238104 - LTR1 LTR ERV1 0 785 1 24 0 0 0 chr2 245019264 245019288 -8237295 + AT_rich Low_complexity Low_complexity 1 24 0 358 244 33 71 chr2 245019423 245019568 -8237015 - L1ME3A LINE L1 -27 6139 5989 2060 117 13 3 chr2 245020410 245020718 -8235865 - AluSx SINE Alu -1 311 1 24 53 0 0 chr2 245020781 245020819 -8235764 + AT_rich Low_complexity Low_complexity 1 38 0 213 289 0 0 chr2 245021224 245021321 -8235262 + (TG)n Simple_repeat Simple_repeat 2 98 0 1101 133 0 18 chr2 245021543 245021709 -8234874 + FRAM SINE Alu 1 163 -3 220 178 22 0 chr2 245022155 245022200 -8234383 + L2 LINE L2 3267 3312 -1 2007 130 0 23 chr2 245022206 245022513 -8234070 + AluSx SINE Alu 1 300 -12 2393 156 46 17 chr2 245022641 245023057 -8233526 - MSTA LTR MaLR 0 428 1 281 320 0 0 chr2 245023097 245023172 -8233411 + CT-rich Low_complexity Low_complexity 4 78 0 458 168 0 11 chr2 245023582 245023677 -8232906 + CT-rich Low_complexity Low_complexity 4 97 0 1147 196 9 0 chr2 245023752 245023977 -8232606 + AluJo SINE Alu 86 312 0 31 26 0 0 chr2 245025102 245025140 -8231443 + AT_rich Low_complexity Low_complexity 1 38 0 279 182 0 0 chr2 245025181 245025236 -8231347 - L1ME4a LINE L1 -4 6117 6063 232 220 0 0 chr2 245025283 245025342 -8231241 - L1ME4a LINE L1 -74 6047 5989 287 267 29 10 chr2 245025405 245025519 -8231064 - L1ME4a LINE L1 -280 5884 5763 21 36 0 0 chr2 245025540 245025568 -8231015 + AT_rich Low_complexity Low_complexity 1 28 0 1835 108 0 51 chr2 245025574 245025914 -8230669 + AluSx SINE Alu 1 325 0 744 259 166 14 chr2 245026001 245026291 -8230292 - LTR16C LTR ERVL 0 491 158 271 288 103 64 chr2 245026427 245026660 -8229923 - L1ME4a LINE L1 -2254 5554 5313 201 206 44 29 chr2 245026719 245026787 -8229796 + T-rich Low_complexity Low_complexity 2 70 0 2240 134 14 22 chr2 245027599 245027964 -8228619 + THE1B LTR MaLR 3 364 0 1447 81 0 33 chr2 245028189 245028400 -8228183 - AluSg/x SINE Alu -11 301 98 1062 246 26 11 chr2 245028544 245028808 -8227775 + MLT1H LTR MaLR 18 285 -264 414 211 54 7 chr2 245028908 245029019 -8227564 + MLT1H LTR MaLR 457 542 -7 461 289 46 62 chr2 245029312 245029572 -8227011 + L3 LINE CR1 1297 1552 -25 1407 227 158 42 chr2 245030621 245031145 -8225438 - MLT1E LTR MaLR -8 585 1 841 162 49 0 chr2 245032161 245032303 -8224280 - MER5A DNA MER1_type -40 149 1 12727 160 24 24 chr2 245032424 245035371 -8221212 - L1MA5 LINE L1 0 6300 3355 1982 104 21 3 chr2 245035371 245035659 -8220924 - AluSx SINE Alu -4 308 16 239 235 0 20 chr2 245035660 245035711 -8220872 - Alu SINE Alu -133 170 121 12727 160 24 24 chr2 245035711 245036329 -8220254 - L1MA5 LINE L1 -2944 3356 2689 1797 178 124 3 chr2 245036336 245036684 -8219899 + MSTB LTR MaLR 36 425 -1 412 176 0 77 chr2 245036688 245036702 -8219881 - MER74A LTR ERVL -2 556 543 2046 89 21 14 chr2 245036702 245036993 -8219590 + AluSg SINE Alu 1 293 -17 412 176 0 77 chr2 245036993 245037069 -8219514 - MER74A LTR ERVL -15 543 473 1220 164 29 29 chr2 245037090 245037328 -8219255 + AluJo SINE Alu 71 308 -4 1765 183 27 3 chr2 245037328 245037656 -8218927 - MER74A LTR ERVL -75 483 148 1372 199 13 96 chr2 245037663 245037764 -8218819 - MLT1A2 LTR MaLR -10 364 256 2250 138 14 30 chr2 245037764 245038133 -8218450 + THE1B LTR MaLR 2 364 0 1372 199 13 96 chr2 245038133 245038428 -8218155 - MLT1A2 LTR MaLR -118 256 1 780 222 6 12 chr2 245038428 245038581 -8218002 - MER74A LTR ERVL -406 152 1 388 186 12 0 chr2 245038638 245038724 -8217859 - LTR37A LTR ERV1 -51 375 289 249 162 14 246 chr2 245038733 245038875 -8217708 - LTR37A LTR ERV1 -241 185 77 250 277 0 0 chr2 245039044 245039109 -8217474 - LTR49-int LTR ERV1 -839 5492 5428 319 192 108 81 chr2 245039140 245039241 -8217342 + MER106B DNA MER1_type 3 100 -136 225 0 0 0 chr2 245039241 245039266 -8217317 + (CA)n Simple_repeat Simple_repeat 2 26 0 907 51 19 51 chr2 245039270 245039645 -8216938 + (TA)n Simple_repeat Simple_repeat 1 363 0 319 192 108 81 chr2 245039645 245039662 -8216921 + MER106B DNA MER1_type 102 117 -119 971 62 32 24 chr2 245039662 245040021 -8216562 + (TA)n Simple_repeat Simple_repeat 1 361 0 319 192 108 81 chr2 245040021 245040098 -8216485 + MER106B DNA MER1_type 117 222 -14 351 0 0 0 chr2 245040098 245040137 -8216446 + (TAA)n Simple_repeat Simple_repeat 1 39 0 319 192 108 81 chr2 245040137 245040153 -8216430 + MER106B DNA MER1_type 222 236 0 551 222 119 77 chr2 245040217 245040478 -8216105 - LTR49-int LTR ERV1 -847 4089 3818 2585 32 0 6 chr2 245040490 245040803 -8215780 + AluY SINE Alu 1 311 0 225 0 0 0 chr2 245042119 245042144 -8214439 + (TTCC)n Simple_repeat Simple_repeat 4 28 0 608 177 13 19 chr2 245042179 245042337 -8214246 + CT-rich Low_complexity Low_complexity 3 159 0 613 129 14 41 chr2 245042368 245042515 -8214068 + C-rich Low_complexity Low_complexity 3 145 0 285 70 47 0 chr2 245042515 245042558 -8214025 + CT-rich Low_complexity Low_complexity 4 48 0 521 308 88 35 chr2 245042558 245043031 -8213552 - L2 LINE L2 -5 3267 2778 252 316 94 0 chr2 245043301 245043472 -8213111 - L2 LINE L2 -971 2343 2157 266 239 8 94 chr2 245043994 245044111 -8212472 + CT-rich Low_complexity Low_complexity 3 109 0 2341 55 0 3 chr2 245044150 245044443 -8212140 - AluY SINE Alu -15 296 5 183 247 19 104 chr2 245044517 245044671 -8211912 + L2 LINE L2 428 568 -2746 588 260 138 5 chr2 245045887 245046083 -8210500 - MIR SINE MIR -20 242 21 1400 195 145 31 chr2 245046595 245047010 -8209573 - MLT1C LTR MaLR 0 467 6 407 255 161 13 chr2 245047262 245047411 -8209172 - MER5A DNA MER1_type 0 189 19 497 311 120 6 chr2 245048566 245048733 -8207850 - MER91A DNA MER1_type -9 187 2 683 201 88 13 chr2 245048843 245049002 -8207581 - MER58A DNA MER1_type -15 209 39 443 295 67 5 chr2 245049115 245049308 -8207275 + L1MC/D LINE L1 5614 5818 -1990 1336 92 5 0 chr2 245049536 245049720 -8206863 - L1PA8 LINE L1 -134 6038 5854 462 36 0 0 chr2 245049719 245049775 -8206808 + L1P3 LINE L1 5759 5814 -358 * 189 289 0 0 chr2 245050055 245050100 -8206483 - L2 LINE L2 -12 3260 3216 * 732 252 0 13 chr2 245050099 245050258 -8206325 - MIR SINE MIR -89 173 17 378 42 0 0 chr2 245052453 245052501 -8204082 + (TG)n Simple_repeat Simple_repeat 2 49 0 543 329 32 19 chr2 245052830 245053045 -8203538 - MIR SINE MIR -22 240 19 1794 200 76 8 chr2 245053259 245053629 -8202954 - MLT2C1 LTR ERVL -2 395 1 199 71 48 24 chr2 245057095 245057137 -8199446 + T-rich Low_complexity Low_complexity 4 46 0 2672 215 47 37 chr2 245057210 245058024 -8198559 + L1M3 LINE L1 4457 5278 -868 272 231 123 0 chr2 245058179 245058244 -8198339 + MIR SINE MIR 123 195 -67 351 244 216 20 chr2 245058267 245058521 -8198062 + L1M3 LINE L1 5260 5563 -608 2864 90 29 102 chr2 245058638 245059150 -8197433 - L1PB1 LINE L1 -1 6150 5676 203 170 21 0 chr2 245059461 245059508 -8197075 + (TG)n Simple_repeat Simple_repeat 1 48 0 309 297 25 25 chr2 245059940 245060058 -8196525 + MER5A DNA MER1_type 9 126 -63 198 269 75 11 chr2 245060530 245060623 -8195960 + L2 LINE L2 3156 3254 -18 342 244 154 0 chr2 245060717 245060795 -8195788 + L2 LINE L2 3183 3272 0 1773 166 9 26 chr2 245061554 245061898 -8194685 - L1MB3 LINE L1 -1 6182 5845 2734 93 0 0 chr2 245062033 245062388 -8194195 - THE1A LTR MaLR 0 355 1 284 278 56 24 chr2 245063425 245063551 -8193032 - MIR SINE MIR -63 145 16 458 275 113 12 chr2 245064780 245064940 -8191643 - MER5B DNA MER1_type -2 176 1 661 235 26 0 chr2 245064991 245065106 -8191477 - MER5A DNA MER1_type -32 157 36 198 0 0 0 chr2 245065106 245065128 -8191455 + (CTG)n Simple_repeat Simple_repeat 1 22 0 661 235 26 0 chr2 245065128 245065165 -8191418 - MER5A DNA MER1_type -153 36 1 957 228 120 77 chr2 245065754 245066170 -8190413 - MLT1J1 LTR MaLR -9 437 4 1167 216 146 48 chr2 245066623 245067082 -8189501 - L1MC4 LINE L1 -1 8041 7538 * 2255 200 58 26 chr2 245067077 245067702 -8188881 - L1M4 LINE L1 -825 5321 4677 2107 239 39 7 chr2 245067695 245068311 -8188272 - L1M4 LINE L1 -3161 2985 2350 * 900 278 25 18 chr2 245068906 245069190 -8187393 - MER69 DNA AcHobo -4 2522 2237 306 292 39 23 chr2 245069406 245069536 -8187047 - MIR SINE MIR -81 181 50 1088 190 46 30 chr2 245072888 245073151 -8183432 - MLT1E3 LTR MaLR 0 624 358 199 291 47 23 chr2 245073253 245073339 -8183244 - L3 LINE CR1 -703 874 787 329 314 48 0 chr2 245073471 245073595 -8182988 + MIR SINE MIR 69 198 -64 254 213 49 0 chr2 245075941 245076002 -8180581 - MER58 DNA MER1_type 0 2420 2357 733 238 31 5 chr2 245076006 245076199 -8180384 - MER58 DNA MER1_type -95 246 49 429 308 95 18 chr2 245076399 245076620 -8179963 + MIR SINE MIR 24 261 -1 7108 116 9 3 chr2 245076643 245077749 -8178834 - L1P LINE L1 -1479 4667 3555 2581 84 0 0 chr2 245077749 245078057 -8178526 - AluSc SINE Alu -1 308 1 6675 67 7 0 chr2 245078083 245079578 -8177005 + L1PA10 LINE L1 4668 6168 0 189 222 67 0 chr2 245079749 245079794 -8176789 + L2 LINE L2 3224 3271 -1 232 338 0 0 chr2 245079998 245080069 -8176514 + (CA)n Simple_repeat Simple_repeat 1 71 0 327 300 33 0 chr2 245080227 245080347 -8176236 - MIR SINE MIR -30 232 109 894 219 92 33 chr2 245083504 245083810 -8172773 - MER33 DNA MER1_type 0 324 1 2271 80 66 0 chr2 245085514 245085800 -8170783 - AluSg SINE Alu -5 305 1 780 251 135 44 chr2 245086608 245086971 -8169612 - MSTD LTR MaLR 0 396 1 363 308 146 23 chr2 245087120 245087380 -8169203 + L1ME LINE L1 5356 5647 -515 1362 225 44 9 chr2 245088027 245088343 -8168240 + MLT1A2 LTR MaLR 38 364 -10 2318 75 7 0 chr2 245088840 245089154 -8167429 + AluSg SINE Alu 1 316 0 208 282 26 0 chr2 245089848 245089926 -8166657 + MIR SINE MIR 164 243 -19 390 277 84 6 chr2 245094342 245094508 -8162075 + L1MC4a LINE L1 6072 6250 -1558 994 256 145 88 chr2 245094744 245095817 -8160766 + L1MC4 LINE L1 6900 8034 -8 2293 122 0 0 chr2 245096991 245097286 -8159297 - AluSx SINE Alu -17 295 1 2236 130 3 0 chr2 245098005 245098312 -8158271 + AluSx SINE Alu 1 308 -4 700 249 40 5 chr2 245099578 245099779 -8156804 + MER3 DNA MER1_type 1 208 -1 193 286 76 48 chr2 245100172 245100277 -8156306 - L2 LINE L2 -492 2822 2715 926 205 6 0 chr2 245103168 245103339 -8153244 + MER58B DNA MER1_type 169 340 -1 34 0 0 0 chr2 245103406 245103440 -8153143 + AT_rich Low_complexity Low_complexity 1 34 0 320 321 61 47 chr2 245105252 245105464 -8151119 - MIR SINE MIR 0 262 48 1065 199 181 3 chr2 245106782 245107103 -8149480 - MER69 DNA AcHobo -47 2479 2102 656 297 92 4 chr2 245107324 245107573 -8149010 + LTR16A LTR ERVL 1 271 -179 725 172 79 187 chr2 245107897 245108240 -8148343 - MER51C LTR ERV1 0 634 329 2066 165 68 29 chr2 245108792 245109234 -8147349 - LTR2B LTR ERV1 0 490 32 23 33 0 0 chr2 245110157 245110187 -8146396 + AT_rich Low_complexity Low_complexity 1 30 0 1417 165 61 127 chr2 245110376 245110619 -8145964 - MSTD LTR MaLR 0 396 191 1925 117 71 4 chr2 245110619 245110900 -8145683 - AluSx SINE Alu -12 300 1 1417 165 61 127 chr2 245110900 245111080 -8145503 - MSTD LTR MaLR -205 191 1 315 0 0 0 chr2 245111569 245111604 -8144979 + (TG)n Simple_repeat Simple_repeat 2 36 0 1445 173 63 81 chr2 245112502 245112883 -8143700 - MLT1B LTR MaLR -16 374 1 21 0 0 0 chr2 245113065 245113086 -8143497 + AT_rich Low_complexity Low_complexity 1 21 0 947 184 25 10 chr2 245113998 245114038 -8142545 - MLT2B1 LTR ERVL -2 552 514 359 21 21 0 chr2 245114038 245114086 -8142497 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 947 184 25 10 chr2 245114086 245114380 -8142203 - MLT2B1 LTR ERVL -40 514 97 1968 130 7 11 chr2 245114802 245115115 -8141468 + AluSx SINE Alu 1 312 0 2476 69 0 0 chr2 245115357 245115660 -8140923 + AluY SINE Alu 1 303 -8 1032 177 35 18 chr2 245116404 245116687 -8139896 - MER33 DNA MER1_type 0 324 37 222 37 0 0 chr2 245119298 245119325 -8137258 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 2141 79 0 7 chr2 245119333 245119610 -8136973 - AluSq SINE Alu -36 277 3 2256 91 10 0 chr2 245119624 245119922 -8136661 - AluSg SINE Alu -9 301 1 427 294 122 39 chr2 245120296 245120582 -8136001 - L1M4 LINE L1 -2848 3298 2989 25 0 0 0 chr2 245120719 245120744 -8135839 + AT_rich Low_complexity Low_complexity 1 25 0 31 26 0 0 chr2 245120795 245120833 -8135750 + AT_rich Low_complexity Low_complexity 1 38 0 768 303 67 19 chr2 245121059 245121584 -8134999 - L1M4 LINE L1 -1122 5024 4475 343 198 72 18 chr2 245121753 245121864 -8134719 - L1MD1 LINE L1 0 6242 6126 1466 226 66 5 chr2 245121869 245122293 -8134290 - L1M4 LINE L1 -3039 3107 2658 384 296 134 36 chr2 245123725 245123964 -8132619 + L1ME4a LINE L1 5074 5288 -1118 2575 121 67 0 chr2 245123964 245124369 -8132214 - MER57B LTR ERV1 0 434 3 384 296 134 36 chr2 245124369 245124648 -8131935 + L1ME4a LINE L1 5288 5648 -758 385 276 132 35 chr2 245124709 245125050 -8131533 + L1ME4a LINE L1 5744 6117 -4 187 298 21 0 chr2 245125403 245125450 -8131133 - L3 LINE CR1 -1197 380 333 2071 139 43 21 chr2 245126238 245126714 -8129869 + MLT2A2 LTR ERVL 1 408 -45 231 167 0 0 chr2 245126714 245126756 -8129827 + (CA)n Simple_repeat Simple_repeat 1 42 0 339 39 78 0 chr2 245126768 245126819 -8129764 + MLT2A2 LTR ERVL 399 453 0 449 308 72 53 chr2 245127028 245127236 -8129347 - MIR SINE MIR -7 255 44 30 0 0 0 chr2 245127311 245127341 -8129242 + AT_rich Low_complexity Low_complexity 1 30 0 3805 30 13 4 chr2 245127341 245127802 -8128781 - L1PA8 LINE L1 -8 6164 5700 5098 124 15 15 chr2 245127802 245128617 -8127966 - L1MC1 LINE L1 -6 6327 5509 6580 183 36 45 chr2 245129348 245130693 -8125890 - L1MC3 LINE L1 -175 7643 6310 515 75 25 0 chr2 245130693 245130773 -8125810 + AluJ/FRAM SINE Alu 231 312 0 6580 183 36 45 chr2 245130773 245131141 -8125442 - L1MC3 LINE L1 -1508 6310 5940 33 0 0 0 chr2 245131712 245131745 -8124838 + AT_rich Low_complexity Low_complexity 1 33 0 482 251 47 63 chr2 245131805 245131916 -8124667 - L1ME1 LINE L1 -7 6159 6051 1895 121 45 51 chr2 245131916 245132051 -8124532 + AluSx SINE Alu 1 135 -177 2302 107 0 0 chr2 245132051 245132360 -8124223 + AluSc SINE Alu 1 309 0 1895 121 45 51 chr2 245132360 245132538 -8124045 + AluSx SINE Alu 135 312 0 482 251 47 63 chr2 245132538 245132617 -8123966 - L1ME1 LINE L1 -115 6051 5972 * 2062 260 88 23 chr2 245132614 245132971 -8123612 - L1MCc LINE L1 -3307 3634 3302 2242 108 7 0 chr2 245132971 245133266 -8123317 - AluSq SINE Alu -16 297 1 2062 260 88 23 chr2 245133266 245135058 -8121525 - L1MCc LINE L1 -3639 3302 1008 408 20 0 0 chr2 245135059 245135108 -8121475 + (TG)n Simple_repeat Simple_repeat 2 50 0 23 0 0 0 chr2 245135311 245135334 -8121249 + AT_rich Low_complexity Low_complexity 1 23 0 1618 264 181 14 chr2 245135680 245136267 -8120316 + MER69 DNA AcHobo 1 700 -526 1865 131 33 7 chr2 245136267 245136568 -8120015 - AluSx SINE Alu 0 308 1 1618 264 181 14 chr2 245136568 245136605 -8119978 + MER69 DNA AcHobo 700 730 -496 336 198 62 12 chr2 245136732 245136813 -8119770 + MIR SINE MIR 101 185 -77 450 307 40 0 chr2 245137270 245137446 -8119137 + MIR SINE MIR 2 184 -78 2383 62 3 7 chr2 245137545 245137851 -8118732 - AluY SINE Alu -4 307 3 580 260 96 29 chr2 245138744 245138952 -8117631 + MIR SINE MIR 35 256 -6 904 263 92 15 chr2 245140204 245140539 -8116044 - LTR16A LTR ERVL -29 421 61 628 180 153 44 chr2 245140574 245140802 -8115781 - ORSL DNA AcHobo -22 253 1 424 336 154 22 chr2 245140885 245141242 -8115341 - L1M4 LINE L1 -2145 4001 3598 237 176 73 0 chr2 245141464 245141532 -8115051 + MER103 DNA DNA 24 96 -70 870 213 20 5 chr2 245141929 245142131 -8114452 - MER3 DNA MER1_type 0 209 5 276 339 45 18 chr2 245142491 245142603 -8113980 + L2 LINE L2 3137 3251 -21 240 315 21 63 chr2 245142775 245142872 -8113711 + L2 LINE L2 2771 2862 -452 1157 117 26 155 chr2 245142872 245143136 -8113447 - MER30 DNA MER1_type 0 230 1 240 315 21 63 chr2 245143136 245143181 -8113402 + L2 LINE L2 2862 2907 -407 325 338 15 7 chr2 245143291 245143427 -8113156 + MLT1K LTR MaLR 210 346 -242 180 0 0 0 chr2 245143648 245143668 -8112915 + (CAA)n Simple_repeat Simple_repeat 2 21 0 709 271 51 72 chr2 245143719 245144176 -8112407 + L1ME2 LINE L1 5288 5730 -434 2205 103 81 32 chr2 245144176 245144546 -8112037 - MLT1B LTR MaLR -2 388 1 709 271 51 72 chr2 245144546 245144700 -8111883 + L1ME2 LINE L1 5730 5886 -278 945 236 107 55 chr2 245144715 245145117 -8111466 + LTR16A LTR ERVL 18 440 -10 1588 206 33 20 chr2 245145159 245145552 -8111031 - MLT1C LTR MaLR 0 467 70 459 290 113 8 chr2 245145613 245145861 -8110722 + HERV16 LTR ERVL 33 306 -4690 662 259 36 27 chr2 245145901 245146121 -8110462 + HERV16 LTR ERVL 386 607 -4389 352 322 142 33 chr2 245146549 245147006 -8109577 + L1ME LINE L1 4041 4547 -1599 2251 80 0 50 chr2 245147524 245147888 -8108695 + L1PB1 LINE L1 5446 5791 -360 320 227 8 23 chr2 245147888 245148016 -8108567 + (TA)n Simple_repeat Simple_repeat 1 126 0 1091 86 0 0 chr2 245148021 245148172 -8108411 + L1PB1 LINE L1 5783 5933 -218 1866 55 0 135 chr2 245148215 245148471 -8108112 + L1PB1 LINE L1 5869 6073 -78 1593 121 0 0 chr2 245148471 245148695 -8107888 + AluSg/x SINE Alu 87 310 0 1866 55 0 135 chr2 245148695 245148765 -8107818 + L1PB1 LINE L1 6073 6151 0 313 318 55 36 chr2 245148947 245149167 -8107416 + L1ME LINE L1 4942 5165 -981 1046 177 38 45 chr2 245149203 245149538 -8107045 - MER33 DNA MER1_type -1 323 1 505 292 88 41 chr2 245149628 245150007 -8106576 + L1ME LINE L1 5255 5657 -464 2738 168 9 2 chr2 245150007 245150471 -8106112 - MLT1C LTR MaLR 0 467 1 505 292 88 41 chr2 245150471 245150509 -8106074 + L1ME LINE L1 5657 5692 -429 252 194 48 0 chr2 245150511 245150573 -8106010 + L2 LINE L2 2549 2613 -701 650 293 29 19 chr2 245152028 245152236 -8104347 + MIR SINE MIR 19 228 -34 21 0 0 0 chr2 245152511 245152532 -8104051 + AT_rich Low_complexity Low_complexity 1 21 0 2238 121 0 3 chr2 245152532 245152837 -8103746 - AluSx SINE Alu -8 304 1 274 261 14 0 chr2 245152982 245153051 -8103532 + CT-rich Low_complexity Low_complexity 1 70 0 713 275 109 4 chr2 245153222 245153498 -8103085 + MLT1J2 LTR MaLR 4 308 -142 800 197 61 0 chr2 245153769 245153916 -8102667 - FRAM SINE Alu -10 156 1 234 225 42 42 chr2 245153943 245154014 -8102569 - L2 LINE L2 -8 3264 3194 312 318 0 0 chr2 245154197 245154282 -8102301 - Charlie8 DNA MER1_type -2332 85 1 471 255 45 89 chr2 245154386 245154723 -8101860 + MLT1K LTR MaLR 244 565 -23 219 258 61 0 chr2 245155198 245155264 -8101319 - L2 LINE L2 0 3272 3203 243 173 0 0 chr2 245155809 245155861 -8100722 + GA-rich Low_complexity Low_complexity 4 55 0 470 281 51 13 chr2 245156073 245156234 -8100349 + MIR SINE MIR 46 212 -50 1733 186 34 96 chr2 245156278 245156756 -8099827 - MLT1D LTR MaLR -57 448 1 2132 89 0 36 chr2 245156757 245157059 -8099524 - AluY SINE Alu -20 291 1 212 377 29 70 chr2 245157626 245157870 -8098713 + L2 LINE L2 3039 3272 0 256 253 25 13 chr2 245158172 245158251 -8098332 - L2 LINE L2 -9 3263 3184 2430 81 0 3 chr2 245158457 245158765 -8097818 + AluSp SINE Alu 1 307 -6 310 217 0 0 chr2 245158778 245158838 -8097745 - MIR SINE MIR -20 242 183 769 294 32 18 chr2 245159075 245159293 -8097290 - MIR SINE MIR -38 224 4 868 283 77 57 chr2 245160019 245160511 -8096072 - L2 LINE L2 -514 2800 2299 832 250 49 25 chr2 245160718 245160962 -8095621 + MIR SINE MIR 8 257 -5 237 196 0 0 chr2 245162524 245162575 -8094008 + (TCTCTG)n Simple_repeat Simple_repeat 4 54 0 801 294 98 28 chr2 245162848 245163545 -8093038 + L2 LINE L2 2494 3268 -45 398 257 164 20 chr2 245164827 245164979 -8091604 + MER5A DNA MER1_type 15 188 -1 354 176 54 0 chr2 245166827 245166901 -8089682 - L1MB3 LINE L1 -58 6125 6048 369 0 0 0 chr2 245167531 245167572 -8089011 + (TC)n Simple_repeat Simple_repeat 2 42 0 2203 118 0 0 chr2 245167572 245167860 -8088723 - AluSx SINE Alu -24 288 1 228 179 75 45 chr2 245168126 245168193 -8088390 + Charlie8 DNA MER1_type 1360 1428 -989 219 255 28 0 chr2 245170062 245170168 -8086415 + (TAA)n Simple_repeat Simple_repeat 1 109 0 585 239 25 12 chr2 245171203 245171366 -8085217 + MIR SINE MIR 7 171 -91 474 213 88 0 chr2 245171762 245171898 -8084685 + MER5A DNA MER1_type 1 148 -41 1194 265 30 43 chr2 245172436 245172626 -8083957 - L1MD2 LINE L1 0 6359 6175 2336 95 0 13 chr2 245172626 245172931 -8083652 - AluSq SINE Alu -12 301 1 1194 265 30 43 chr2 245172931 245173113 -8083470 - L1MD2 LINE L1 -184 6175 5992 501 226 45 40 chr2 245173211 245173388 -8083195 - LTR24B LTR ERV1 -6 570 393 2258 101 19 7 chr2 245173393 245173743 -8082840 - AluSx SINE Alu 0 354 1 397 183 0 24 chr2 245173994 245174076 -8082507 - LTR24B LTR ERV1 -493 83 4 439 314 55 15 chr2 245174407 245174629 -8081954 - HAL1b LINE L1 -758 590 354 2266 90 7 10 chr2 245174629 245174939 -8081644 - AluY SINE Alu -2 309 1 439 314 55 15 chr2 245174939 245174987 -8081596 - HAL1b LINE L1 -994 354 309 191 36 36 0 chr2 245175557 245175585 -8080998 + (CAA)n Simple_repeat Simple_repeat 2 30 0 437 278 88 63 chr2 245176988 245177419 -8079164 - L2 LINE L2 -4 3268 2827 367 234 166 14 chr2 245179174 245179319 -8077264 - MER96 DNA MER1_type? -5 170 4 1212 71 0 22 chr2 245179473 245179497 -8077086 + (TTTC)n Simple_repeat Simple_repeat 1 203 0 1212 71 0 22 chr2 245179497 245179681 -8076902 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2507 78 0 0 chr2 245179731 245180039 -8076544 - AluY SINE Alu -3 308 1 246 268 96 73 chr2 245180695 245180956 -8075627 - L1ME3A LINE L1 -213 5957 5691 528 252 70 18 chr2 245181583 245181874 -8074709 - L1ME3A LINE L1 -677 5507 5207 244 326 96 0 chr2 245183285 245183420 -8073163 + MIR SINE MIR 31 178 -84 342 264 47 39 chr2 245183679 245183808 -8072775 - MIR3 SINE MIR -76 132 3 621 264 88 100 chr2 245183948 245184278 -8072305 - MLT1K LTR MaLR -116 472 147 1139 161 19 28 chr2 245184979 245185190 -8071393 + MER3 DNA MER1_type 1 209 0 206 188 42 21 chr2 245186909 245186957 -8069626 - L2 LINE L2 -1 3271 3223 342 252 205 0 chr2 245187067 245187194 -8069389 + MER91A DNA MER1_type 1 153 -43 2206 120 3 0 chr2 245188656 245188965 -8067618 - AluSx SINE Alu -2 310 1 1865 123 158 78 chr2 245190125 245190499 -8066084 - MER4A LTR ERV1 0 664 261 425 127 241 0 chr2 245190499 245190578 -8066005 - MER4A LTR ERV1 -566 98 1 1403 287 56 9 chr2 245191427 245191967 -8064616 - L1MC4 LINE L1 0 8042 7478 449 210 20 20 chr2 245192218 245192318 -8064265 - L2 LINE L2 0 3313 3214 2488 220 22 24 chr2 245192468 245193060 -8063523 - LTR31 LTR ERV1 -15 604 14 269 242 8 102 chr2 245193732 245193841 -8062742 - MER5A DNA MER1_type -15 174 77 2465 88 0 0 chr2 245193841 245194147 -8062436 - AluSg SINE Alu -4 306 1 269 242 8 102 chr2 245194147 245194165 -8062418 - MER5A DNA MER1_type -112 77 59 180 0 0 0 chr2 245194837 245194857 -8061726 + (T)n Simple_repeat Simple_repeat 1 20 0 1639 45 0 0 chr2 245194879 245195077 -8061506 - L1PA4 LINE L1 0 6155 5958 1919 23 0 0 chr2 245195077 245195294 -8061289 + L1PA4 LINE L1 5732 5948 -207 293 279 121 7 chr2 245195968 245196108 -8060475 + MER117 DNA MER1_type 1 156 -41 779 219 5 30 chr2 245196556 245196757 -8059826 - MIR SINE MIR 0 262 67 189 74 0 0 chr2 245197248 245197275 -8059308 + (CA)n Simple_repeat Simple_repeat 2 28 0 260 352 19 38 chr2 245197330 245197489 -8059094 + MIR3 SINE MIR 21 176 -32 823 126 37 0 chr2 245199573 245199708 -8056875 - L1PA15 LINE L1 0 6165 6026 238 154 0 0 chr2 245199987 245200026 -8056557 - L2 LINE L2 -1 3312 3274 919 48 89 0 chr2 245200124 245200248 -8056335 - MER85 DNA T2_type -3 136 2 2322 112 0 3 chr2 245200520 245200833 -8055750 + AluSx SINE Alu 1 312 0 21 36 0 0 chr2 245201186 245201214 -8055369 + AT_rich Low_complexity Low_complexity 1 28 0 1402 218 42 26 chr2 245202688 245202805 -8053778 + AluJo SINE Alu 1 115 -197 333 0 0 0 chr2 245202805 245202842 -8053741 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 1402 218 42 26 chr2 245202842 245203031 -8053552 + AluJo SINE Alu 115 312 0 361 307 103 52 chr2 245203906 245204539 -8052044 - L2 LINE L2 0 3272 2624 197 171 171 0 chr2 245205372 245205413 -8051170 - L2 LINE L2 -6 3266 3219 208 167 0 24 chr2 245205413 245205455 -8051128 + (CA)n Simple_repeat Simple_repeat 2 42 0 185 313 60 0 chr2 245207155 245207222 -8049361 + MIR SINE MIR 113 183 -79 3400 125 25 0 chr2 245207531 245208018 -8048565 + MER1A DNA MER1_type 31 529 0 393 152 359 0 chr2 245208771 245208863 -8047720 + MIR SINE MIR 9 133 -129 563 231 37 0 chr2 245208863 245208971 -8047612 - MER63B DNA MER1_type 0 436 325 1699 189 13 22 chr2 245208973 245209285 -8047298 + AluJb SINE Alu 1 309 -3 1411 224 6 42 chr2 245209305 245209658 -8046925 - MER63B DNA MER1_type -96 340 1 458 193 44 53 chr2 245209659 245209773 -8046810 + MIR SINE MIR 129 241 -21 280 291 198 35 chr2 245209997 245210158 -8046425 - MIR SINE MIR -56 206 14 520 227 108 45 chr2 245210158 245210334 -8046249 + MER5A DNA MER1_type 3 189 0 378 265 37 157 chr2 245210624 245210812 -8045771 - MER102b DNA MER1_type -1112 316 107 2174 88 0 0 chr2 245210812 245211095 -8045488 - AluSq SINE Alu -30 283 1 1812 106 84 28 chr2 245211095 245211379 -8045204 - AluSx SINE Alu -11 301 2 378 265 37 157 chr2 245211379 245211540 -8045043 - MER102b DNA MER1_type -1319 109 8 1677 123 15 19 chr2 245211562 245211822 -8044761 - AluSx SINE Alu -23 289 31 2045 127 0 0 chr2 245213074 245213373 -8043210 - AluSg SINE Alu -11 299 1 2248 103 3 0 chr2 245213387 245213698 -8042885 - AluSx SINE Alu 0 312 1 933 286 59 3 chr2 245213991 245214315 -8042268 + LTR16C LTR ERVL 66 491 0 2393 87 0 0 chr2 245216039 245216351 -8040232 + AluSx SINE Alu 1 312 0 504 207 78 52 chr2 245216857 245217050 -8039533 - LTR40b LTR ERVL -8 454 257 22 35 0 0 chr2 245217447 245217476 -8039107 + AT_rich Low_complexity Low_complexity 1 29 0 2239 95 0 3 chr2 245217615 245217919 -8038664 - AluSq SINE Alu -10 303 1 656 279 55 5 chr2 245218756 245218957 -8037626 + MIR SINE MIR 1 211 -51 326 337 55 12 chr2 245219220 245219383 -8037200 - MIR SINE MIR -72 190 21 723 280 67 4 chr2 245220003 245220271 -8036312 - LTR16C LTR ERVL -17 474 190 2123 94 3 29 chr2 245220966 245221275 -8035308 + AluSp SINE Alu 1 301 -12 184 330 57 11 chr2 245222707 245222795 -8033788 + L2 LINE L2 3181 3272 0 484 201 76 42 chr2 245223081 245223225 -8033358 + MER117 DNA MER1_type 15 163 -34 1620 94 5 5 chr2 245223314 245223538 -8033045 - pTR5 LTR ERV1 -2043 395 172 353 250 31 0 chr2 245223541 245223637 -8032946 - LTR30 LTR ERV1 -80 642 544 5927 123 47 61 chr2 245223637 245224802 -8031781 - pTR5 LTR ERV1 -413 2025 743 2032 234 28 11 chr2 245224988 245225446 -8031137 - MLT1C LTR MaLR -1 466 1 2196 99 0 10 chr2 245225989 245226301 -8030282 - AluSc SINE Alu 0 309 1 269 68 23 0 chr2 245226639 245226683 -8029900 + (GA)n Simple_repeat Simple_repeat 2 46 0 2178 97 0 3 chr2 245227368 245227698 -8028885 + AluSx SINE Alu 1 312 0 229 254 99 0 chr2 245227719 245227790 -8028793 + L3 LINE CR1 1273 1350 -227 427 179 160 9 chr2 245227826 245227932 -8028651 - L2 LINE L2 0 3313 3192 324 0 0 0 chr2 245229968 245230004 -8026579 + (TG)n Simple_repeat Simple_repeat 2 37 0 279 178 41 14 chr2 245230154 245230227 -8026356 + HsTC2 DNA Tc2 1 75 -1823 221 255 196 29 chr2 245230779 245230881 -8025702 + MIR SINE MIR 43 161 -101 272 365 36 29 chr2 245231068 245231205 -8025378 + L2 LINE L2 3134 3271 -1 731 276 0 35 chr2 245231463 245231637 -8024946 - MER91B DNA MER1_type -18 172 5 762 156 0 31 chr2 245232306 245232434 -8024149 - AluJb SINE Alu -185 127 4 851 128 0 38 chr2 245232699 245232832 -8023751 + FLAM_C SINE Alu 3 130 -13 195 358 0 0 chr2 245234238 245234305 -8022278 + L3 LINE CR1 1510 1576 -1 188 204 19 19 chr2 245235796 245235850 -8020733 - MIR SINE MIR -41 221 168 196 276 55 0 chr2 245235887 245235975 -8020608 + MIR SINE MIR 36 128 -80 543 263 112 48 chr2 245236245 245236557 -8020026 + L2 LINE L2 2442 2773 -541 2168 108 0 10 chr2 245236570 245236876 -8019707 + AluSx SINE Alu 1 303 -9 335 341 36 71 chr2 245236933 245237297 -8019286 + L2 LINE L2 2921 3271 -1 306 303 163 22 chr2 245238468 245239058 -8017525 + L1ME LINE L1 5209 5896 -225 230 302 121 73 chr2 245239345 245239435 -8017148 + L2 LINE L2 2632 2716 -556 2240 121 11 55 chr2 245239435 245239815 -8016768 + THE1B LTR MaLR 2 364 0 230 302 121 73 chr2 245239815 245240229 -8016354 + L2 LINE L2 2716 3200 -72 308 298 24 0 chr2 245241912 245241996 -8014587 - MIR SINE MIR 0 262 177 1332 237 38 17 chr2 245242016 245242389 -8014194 - LTR43 LTR ERV1 -52 480 176 213 229 0 0 chr2 245242594 245242642 -8013941 - MIR SINE MIR -113 149 102 197 65 32 0 chr2 245242680 245242711 -8013872 + (TATAA)n Simple_repeat Simple_repeat 4 35 0 442 336 67 57 chr2 245243426 245243846 -8012737 - L1M4 LINE L1 -1308 4838 4415 402 291 75 83 chr2 245243992 245244246 -8012337 - L1M4 LINE L1 -2142 4004 3753 450 238 12 0 chr2 245245303 245245387 -8011196 - MER58 DNA MER1_type -2334 86 2 183 367 22 0 chr2 245246169 245246259 -8010324 + MIR SINE MIR 157 248 -14 606 311 20 60 chr2 245246840 245247088 -8009495 + MIR SINE MIR 4 241 -21 715 227 64 99 chr2 245247313 245247688 -8008895 - L1ME4a LINE L1 -192 5929 5568 2128 93 0 29 chr2 245248751 245249063 -8007520 + AluSx SINE Alu 1 303 -9 960 175 109 13 chr2 245249935 245250162 -8006421 - ORSL DNA AcHobo -2 273 25 430 187 13 0 chr2 245250162 245250237 -8006346 - MER81 DNA DNA 0 114 39 304 333 76 0 chr2 245250575 245250680 -8005903 - MER81 DNA DNA 0 114 2 326 235 94 0 chr2 245250822 245250907 -8005676 - MLT1H LTR MaLR 0 549 457 264 77 0 0 chr2 245250914 245250953 -8005630 + (CAGGG)n Simple_repeat Simple_repeat 3 41 0 525 254 52 12 chr2 245251081 245251254 -8005329 - MLT1H LTR MaLR -294 255 76 2135 88 0 3 chr2 245251855 245252178 -8004405 - AluSg SINE Alu 0 322 1 1308 241 46 82 chr2 245252290 245252450 -8004133 - MER39 LTR ERV1 -1 687 523 1844 145 3 0 chr2 245252450 245252746 -8003837 - AluSx SINE Alu -15 297 1 1308 241 46 82 chr2 245252746 245253146 -8003437 - MER39 LTR ERV1 -165 523 1 398 257 67 129 chr2 245253645 245254018 -8002565 - L2 LINE L2 -8 3264 2915 485 306 172 11 chr2 245255322 245255590 -8000993 + L3 LINE CR1 1159 1469 -108 621 294 55 64 chr2 245256632 245257170 -7999413 - L1ME4a LINE L1 -229 5892 5364 1909 120 0 58 chr2 245257397 245257696 -7998887 + AluSq SINE Alu 7 282 -31 369 0 0 0 chr2 245257696 245257737 -7998846 + (CA)n Simple_repeat Simple_repeat 2 42 0 306 242 116 32 chr2 245260504 245260599 -7995984 + L2 LINE L2 3211 3313 0 10203 173 23 28 chr2 245261582 245263405 -7993178 - L1MA9 LINE L1 -6 6306 4476 2437 63 10 0 chr2 245263405 245263704 -7992879 + AluY SINE Alu 1 302 -9 10203 173 23 28 chr2 245263704 245263923 -7992660 - L1MA9 LINE L1 -1836 4476 4257 2260 97 14 0 chr2 245263923 245264213 -7992370 - AluSg SINE Alu -15 295 2 10203 173 23 28 chr2 245264213 245264232 -7992351 - L1MA9 LINE L1 -2055 4257 4239 288 70 0 0 chr2 245264232 245264275 -7992308 + (TG)n Simple_repeat Simple_repeat 2 44 0 10203 173 23 28 chr2 245264275 245265360 -7991223 - L1MA9 LINE L1 -2073 4239 3179 222 271 17 0 chr2 245267206 245267265 -7989318 - L2 LINE L2 -5 3267 3208 468 266 164 21 chr2 245269754 245270175 -7986408 - L1ME4a LINE L1 0 6121 5641 37 39 0 0 chr2 245270175 245270226 -7986357 + AT_rich Low_complexity Low_complexity 1 51 0 25 0 0 0 chr2 245270309 245270334 -7986249 + AT_rich Low_complexity Low_complexity 1 25 0 1693 123 0 0 chr2 245270381 245270609 -7985974 + AluSx SINE Alu 51 278 -34 333 0 0 0 chr2 245270614 245270651 -7985932 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 207 323 16 55 chr2 245272915 245273042 -7983541 + L2 LINE L2 2644 2765 -549 363 315 97 6 chr2 245273391 245273556 -7983027 + MIR SINE MIR 79 258 -4 280 276 52 69 chr2 245273576 245273750 -7982833 + L2 LINE L2 2944 3114 -158 312 350 67 0 chr2 245273899 245274019 -7982564 + L2 LINE L2 3118 3245 -27 2108 185 44 17 chr2 245274260 245274703 -7981880 - MLT2B2 LTR ERVL -48 472 1 9144 119 81 35 chr2 245274998 245276618 -7979965 - pTR5 LTR ERV1 0 2438 744 228 286 32 0 chr2 245276684 245276747 -7979836 + MIR SINE MIR 5 69 -193 180 0 0 0 chr2 245277082 245277102 -7979481 + (CA)n Simple_repeat Simple_repeat 1 20 0 278 321 12 0 chr2 245278405 245278489 -7978094 + MIR3 SINE MIR 109 193 -15 1613 316 116 34 chr2 245278915 245279907 -7976676 + L2 LINE L2 1285 2195 -1119 1486 142 0 21 chr2 245279907 245280146 -7976437 - AluSg/x SINE Alu -7 305 72 1613 316 116 34 chr2 245280146 245280559 -7976024 + L2 LINE L2 2195 2816 -498 2315 88 0 30 chr2 245280559 245280864 -7975719 + AluY SINE Alu 1 296 -15 1613 316 116 34 chr2 245280864 245280916 -7975667 + L2 LINE L2 2816 2862 -452 288 277 12 0 chr2 245280939 245281022 -7975561 + MER94 DNA DNA 33 116 -18 502 296 36 139 chr2 245281035 245281451 -7975132 + L2 LINE L2 2900 3272 0 1488 276 79 24 chr2 245281471 245281963 -7974620 + LTR40a LTR ERVL 1 519 0 264 300 118 18 chr2 245282391 245282501 -7974082 + MIR SINE MIR 16 136 -72 215 218 18 0 chr2 245282505 245282560 -7974023 + (TTCA)n Simple_repeat Simple_repeat 3 58 0 202 295 45 98 chr2 245282580 245282824 -7973759 - L2 LINE L2 -97 3175 2945 634 244 153 7 chr2 245284157 245284431 -7972152 - HAL1 LINE L1 -82 2425 2112 432 221 57 33 chr2 245284448 245284570 -7972013 + MLT1I LTR MaLR 1 125 -284 1141 329 80 42 chr2 245284663 245285301 -7971282 + L1MB1 LINE L1 1596 2257 -5229 2433 262 82 11 chr2 245285446 245286543 -7970040 + L1MB1 LINE L1 2078 3127 -4438 8991 189 51 35 chr2 245286678 245289762 -7966821 + L1M2b LINE L1 6 3538 -3670 194 62 31 0 chr2 245289762 245289794 -7966789 + (TA)n Simple_repeat Simple_repeat 1 33 0 8991 189 51 35 chr2 245289794 245290825 -7965758 + L1M2b LINE L1 3538 4552 -2656 5171 37 2 0 chr2 245290847 245291421 -7965162 + L1PA5 LINE L1 5580 6154 0 285 83 0 0 chr2 245291423 245291459 -7965124 + FRAM/FAM SINE Alu 54 89 -86 5375 140 8 12 chr2 245291459 245292322 -7964261 + L1MA4A LINE L1 5438 6297 -6 21 0 0 0 chr2 245292346 245292367 -7964216 + AT_rich Low_complexity Low_complexity 1 21 0 13025 203 33 23 chr2 245292374 245296639 -7959944 + L1MB1 LINE L1 3266 7587 0 441 308 0 0 chr2 245296695 245296815 -7959768 + MLT1I LTR MaLR 288 407 -2 478 231 172 42 chr2 245296819 245297057 -7959526 - HAL1 LINE L1 -428 2079 1811 576 269 14 0 chr2 245297147 245297288 -7959295 + MLT1J LTR MaLR 102 244 -267 1074 225 9 22 chr2 245297292 245297514 -7959069 - MER20 DNA MER1_type 0 219 1 676 286 62 0 chr2 245297522 245297700 -7958883 - MER5A DNA MER1_type 0 189 1 669 293 136 34 chr2 245298763 245299204 -7957379 - L2 LINE L2 0 3313 2828 1938 183 34 3 chr2 245300045 245300400 -7956183 + MLT2D LTR ERVL 1 366 -48 2738 82 0 0 chr2 245300400 245300767 -7955816 - L1PA7 LINE L1 -853 5293 4927 7265 58 1 0 chr2 245300767 245301626 -7954957 + L1PA7 LINE L1 5291 6151 -3 228 91 136 0 chr2 245301639 245301683 -7954900 + MLT2D LTR ERVL 501 550 -4 437 282 0 0 chr2 245301706 245301809 -7954774 - MIR SINE MIR -113 149 47 267 216 13 35 chr2 245304803 245304907 -7951676 + L1ME LINE L1 5338 5439 -682 473 290 65 12 chr2 245305211 245305380 -7951203 + MER5B DNA MER1_type 1 178 0 270 222 48 0 chr2 245305667 245305730 -7950853 + GA-rich Low_complexity Low_complexity 3 68 0 1216 230 37 21 chr2 245306186 245306512 -7950071 - MLT1A1 LTR MaLR -23 342 12 1948 192 43 41 chr2 245306835 245307305 -7949278 - MLT2D LTR ERVL -2 518 1 26 50 0 0 chr2 245307331 245307371 -7949212 + AT_rich Low_complexity Low_complexity 1 40 0 1300 47 0 0 chr2 245307674 245307824 -7948759 - L1PA4 LINE L1 -6 6149 6000 2215 36 1 6 chr2 245307824 245308158 -7948425 + L1ME LINE L1 5130 5461 -660 24 0 0 0 chr2 245308469 245308493 -7948090 + AT_rich Low_complexity Low_complexity 1 24 0 345 334 118 30 chr2 245308874 245309377 -7947206 + L2 LINE L2 2607 3203 -110 3377 220 12 8 chr2 245309677 245310327 -7946256 + MER82 DNA MER2_type 1 653 0 390 344 57 22 chr2 245310332 245310516 -7946067 + MIR3 SINE MIR 9 207 -1 262 239 30 0 chr2 245310920 245310987 -7945596 + MIR SINE MIR 81 149 -113 194 370 87 0 chr2 245311119 245311211 -7945372 + L2 LINE L2 3134 3233 -39 1114 149 128 3 chr2 245311211 245311306 -7945277 - LTR47A LTR ERVL 0 452 370 248 0 31 0 chr2 245311306 245311338 -7945245 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1114 149 128 3 chr2 245311338 245311570 -7945013 - LTR47A LTR ERVL -82 370 1 204 40 0 0 chr2 245312460 245312485 -7944098 + (TC)n Simple_repeat Simple_repeat 1 25 0 * 522 114 0 0 chr2 245312484 245312563 -7944020 + (CA)n Simple_repeat Simple_repeat 1 79 0 261 331 61 61 chr2 245312701 245312882 -7943701 + MIR SINE MIR 70 250 -12 306 257 118 59 chr2 245312970 245313122 -7943461 + L2 LINE L2 3150 3310 -3 21 36 0 0 chr2 245313345 245313373 -7943210 + AT_rich Low_complexity Low_complexity 1 28 0 358 332 57 46 chr2 245313869 245314239 -7942344 - L2 LINE L2 -69 3203 2830 21 57 0 0 chr2 245314772 245314807 -7941776 + AT_rich Low_complexity Low_complexity 1 35 0 342 188 30 10 chr2 245315877 245315978 -7940605 + CT-rich Low_complexity Low_complexity 5 107 0 251 325 44 48 chr2 245316012 245316218 -7940365 - MLT1K LTR MaLR -158 430 226 36 40 0 0 chr2 245316235 245316285 -7940298 + AT_rich Low_complexity Low_complexity 1 50 0 3861 179 41 28 chr2 245316317 245317051 -7939532 - L1MB7 LINE L1 -2 6182 5263 1840 159 10 0 chr2 245317051 245317347 -7939236 - AluSx SINE Alu -13 299 1 3861 179 41 28 chr2 245317347 245317748 -7938835 - L1MB7 LINE L1 -921 5263 4869 2762 29 0 3 chr2 245319264 245319576 -7937007 + AluY SINE Alu 1 311 0 630 69 0 23 chr2 245319708 245319795 -7936788 - L1MA3 LINE L1 -2 6303 6219 313 340 21 0 chr2 245319988 245320129 -7936454 - MIR SINE MIR -43 219 76 658 279 39 39 chr2 245320366 245320594 -7935989 - MARNA DNA Mariner -93 493 266 2187 201 52 54 chr2 245320594 245320954 -7935629 - MLT1F LTR MaLR 0 542 182 249 33 0 0 chr2 245320954 245320984 -7935599 + (GA)n Simple_repeat Simple_repeat 1 30 0 2187 201 52 54 chr2 245320984 245321161 -7935422 - MLT1F LTR MaLR -360 182 6 267 350 100 12 chr2 245321173 245321333 -7935250 - MARNA DNA Mariner -322 264 91 2225 116 0 0 chr2 245322237 245322530 -7934053 - AluSq SINE Alu -20 293 1 203 308 176 39 chr2 245322568 245322955 -7933628 + L2 LINE L2 2140 2579 -735 340 292 149 61 chr2 245323428 245323873 -7932710 + L2 LINE L2 2764 3271 -1 2237 99 3 0 chr2 245324664 245324956 -7931627 - AluSq SINE Alu -20 293 1 209 258 101 34 chr2 245325175 245325264 -7931319 + L2 LINE L2 3180 3274 -39 212 236 18 18 chr2 245325657 245325712 -7930871 - L2 LINE L2 0 3313 3259 3554 193 14 33 chr2 245326382 245327047 -7929536 + MER82 DNA MER2_type 2 653 0 216 0 0 0 chr2 245328924 245328948 -7927635 + (TTG)n Simple_repeat Simple_repeat 2 25 0 2289 81 30 3 chr2 245329143 245329441 -7927142 - AluY SINE Alu -5 306 1 609 208 8 0 chr2 245329473 245329593 -7926990 + L1MC2 LINE L1 6015 6135 -209 673 185 0 75 chr2 245329596 245329742 -7926841 + L1MC2 LINE L1 6200 6334 -10 393 302 125 54 chr2 245330190 245331241 -7925342 - L1MB7 LINE L1 -1370 4776 3652 279 54 0 0 chr2 245331341 245331378 -7925205 + (TA)n Simple_repeat Simple_repeat 2 38 0 10489 39 0 1 chr2 245331378 245333318 -7923265 - L1PA5 LINE L1 -9 6145 4185 25 65 0 0 chr2 245333382 245333428 -7923155 + AT_rich Low_complexity Low_complexity 1 46 0 1798 179 18 59 chr2 245335121 245335511 -7921072 - MLT1A2 LTR MaLR 0 374 1 1241 198 27 12 chr2 245336484 245336742 -7919841 + L1MC1 LINE L1 168 429 -5997 7194 190 75 40 chr2 245336748 245338278 -7918305 + L1MC1 LINE L1 795 2270 -4156 549 67 0 111 chr2 245338278 245338317 -7918266 + MADE1 DNA Mariner 1 26 -54 2372 98 0 0 chr2 245338317 245338612 -7917971 - AluSc SINE Alu -14 295 1 549 67 0 111 chr2 245338612 245338662 -7917921 + MADE1 DNA Mariner 26 80 0 7194 190 75 40 chr2 245338662 245340303 -7916280 + L1MC1 LINE L1 2270 4064 -2362 233 304 81 14 chr2 245340302 245340450 -7916133 + L1MC1 LINE L1 4861 5018 -1408 * 5717 156 29 7 chr2 245340446 245341423 -7915160 + L1MC1 LINE L1 5610 6609 -4 2354 168 42 14 chr2 245341502 245341930 -7914653 - MLT1D LTR MaLR 0 505 66 2251 156 30 0 chr2 245341930 245342301 -7914282 + MLT1B LTR MaLR 1 382 -8 358 177 0 89 chr2 245342305 245342384 -7914199 - MLT1D LTR MaLR -433 72 1 504 285 89 6 chr2 245342444 245342602 -7913981 - MIR SINE MIR -57 205 35 2177 88 34 0 chr2 245342746 245343041 -7913542 - AluY SINE Alu -6 305 1 1399 249 54 62 chr2 245344767 245345233 -7911350 + MLT1C LTR MaLR 6 467 0 1290 224 98 38 chr2 245345866 245346286 -7910297 + MLT1C LTR MaLR 21 465 -2 299 305 112 15 chr2 245346302 245346499 -7910084 - L1ME LINE L1 -294 5827 5612 24 0 0 0 chr2 245347607 245347631 -7908952 + AT_rich Low_complexity Low_complexity 1 24 0 471 319 0 0 chr2 245347726 245348131 -7908452 + (CA)n Simple_repeat Simple_repeat 1 405 0 372 380 0 11 chr2 245348153 245348332 -7908251 + (CACG)n Simple_repeat Simple_repeat 3 179 0 270 259 53 23 chr2 245348770 245348901 -7907682 + MLT1L LTR MaLR 146 280 -335 262 295 67 60 chr2 245349102 245349251 -7907332 - MIR3 SINE MIR -45 163 14 1675 163 58 3 chr2 245349437 245349731 -7906852 - AluJo SINE Alu -2 310 1 300 53 0 0 chr2 245350116 245350154 -7906429 + (TTG)n Simple_repeat Simple_repeat 2 39 0 1673 220 52 38 chr2 245350943 245351326 -7905257 + MLT1C LTR MaLR 40 431 -36 1994 186 3 17 chr2 245351326 245351671 -7904912 + MER2 DNA MER2_type 1 340 -4 1673 220 52 38 chr2 245351671 245351709 -7904874 + MLT1C LTR MaLR 431 467 0 917 216 77 10 chr2 245351751 245351945 -7904638 - MLT1E LTR MaLR 0 593 387 2182 119 0 3 chr2 245352107 245352409 -7904174 + AluSx SINE Alu 1 301 -11 309 284 25 0 chr2 245352765 245352846 -7903737 - L2 LINE L2 -7 3306 3224 303 233 0 0 chr2 245353105 245353208 -7903375 + GA-rich Low_complexity Low_complexity 1 103 0 423 0 0 0 chr2 245353212 245353259 -7903324 + (CA)n Simple_repeat Simple_repeat 2 48 0 385 312 89 0 chr2 245353513 245353670 -7902913 + MIR SINE MIR 86 256 -6 246 363 65 0 chr2 245354124 245354248 -7902335 + MIR3 SINE MIR 2 133 -75 441 0 0 0 chr2 245354708 245354757 -7901826 + (TC)n Simple_repeat Simple_repeat 2 50 0 1986 143 3 7 chr2 245355590 245355883 -7900700 + AluJo SINE Alu 1 292 -20 1160 159 52 52 chr2 245356244 245356552 -7900031 + L1MA8 LINE L1 5984 6291 0 643 296 81 42 chr2 245356571 245357003 -7899580 + HAL1b LINE L1 188 636 -712 186 298 96 53 chr2 245358251 245358345 -7898238 - MER5A DNA MER1_type -83 106 9 5579 67 15 11 chr2 245358411 245359148 -7897435 + L1PA8 LINE L1 5420 6159 -13 1518 115 26 115 chr2 245359159 245359498 -7897085 - L1MA7 LINE L1 -2 6289 5981 2762 32 0 3 chr2 245360180 245360492 -7896091 - AluY SINE Alu 0 311 1 839 206 228 18 chr2 245361017 245361293 -7895290 + MLT2F LTR ERVL 6 339 -324 996 195 28 104 chr2 245361312 245361732 -7894851 + MLT2F LTR ERVL 222 663 0 257 205 34 0 chr2 245361761 245361878 -7894705 + (TA)n Simple_repeat Simple_repeat 1 121 0 355 216 90 36 chr2 245362139 245362250 -7894333 - L2 LINE L2 -6 3307 3191 567 229 34 50 chr2 245363480 245363665 -7892918 + MLT1F LTR MaLR 2 188 -379 914 235 35 25 chr2 245363665 245363984 -7892599 - L1MEc LINE L1 -3534 2681 2360 346 306 40 0 chr2 245364043 245364167 -7892416 - L1MEc LINE L1 -3848 2367 2239 1625 201 15 41 chr2 245364188 245364577 -7892006 - MLT2C1 LTR ERVL -18 379 1 335 231 40 81 chr2 245364594 245364767 -7891816 - L1MEc LINE L1 -4128 2268 2103 2448 271 111 43 chr2 245364786 245364925 -7891658 - L1MEc LINE L1 -4775 1621 1493 2204 103 0 0 chr2 245364925 245365240 -7891343 - AluSg SINE Alu 0 315 1 2448 271 111 43 chr2 245365240 245366002 -7890581 - L1MEc LINE L1 -4903 1493 784 2769 13 0 7 chr2 245366002 245366307 -7890276 - AluYa5 SINE Alu -8 303 1 2448 271 111 43 chr2 245366307 245366902 -7889681 - L1MEc LINE L1 -5612 784 22 1627 257 37 12 chr2 245367657 245368085 -7888498 - LTR47B LTR ERVL 0 443 5 1137 221 74 106 chr2 245368471 245368945 -7887638 + MLT1J LTR MaLR 3 461 -50 227 128 0 43 chr2 245368947 245368994 -7887589 + L1MC4 LINE L1 6659 6703 -1339 233 178 0 0 chr2 245369024 245369069 -7887514 + LTR66 LTR ERVL 394 438 -172 253 222 83 0 chr2 245369070 245369142 -7887441 - L1MC4 LINE L1 -1351 6691 6614 248 209 45 0 chr2 245369142 245369209 -7887374 + (CATATA)n Simple_repeat Simple_repeat 4 73 0 213 39 0 0 chr2 245369216 245369242 -7887341 + (CA)n Simple_repeat Simple_repeat 1 26 0 * 243 0 0 0 chr2 245369241 245369268 -7887315 + (TA)n Simple_repeat Simple_repeat 2 28 0 * 369 0 0 0 chr2 245369267 245369308 -7887275 + (GA)n Simple_repeat Simple_repeat 2 42 0 2096 118 0 7 chr2 245369309 245369589 -7886994 - AluSq SINE Alu -35 278 1 258 274 14 0 chr2 245369685 245369758 -7886825 + (CATATA)n Simple_repeat Simple_repeat 2 75 0 1914 247 50 14 chr2 245370119 245370638 -7885945 + MLT1F LTR MaLR 1 538 -4 353 294 68 25 chr2 245371903 245372066 -7884517 + MIR SINE MIR 25 194 -68 229 324 0 0 chr2 245373341 245373412 -7883171 + MIR SINE MIR 156 226 -36 2159 131 3 3 chr2 245374170 245374476 -7882107 - AluSx SINE Alu -6 306 1 1863 135 53 0 chr2 245375170 245375452 -7881131 - AluSx SINE Alu -15 297 1 2349 191 127 6 chr2 245375781 245376278 -7880305 - MER41D LTR ERV1 0 557 1 216 158 0 0 chr2 245377557 245377595 -7878988 + T-rich Low_complexity Low_complexity 1 38 0 253 208 208 0 chr2 245377847 245377919 -7878664 + MIR SINE MIR 5 91 -171 1947 191 3 3 chr2 245377951 245378297 -7878286 - MER57A LTR ERV1 -4 399 54 970 235 96 106 chr2 245379095 245379124 -7877459 + MER74A LTR ERVL 67 95 -463 2081 122 3 20 chr2 245379124 245379428 -7877155 - AluSg SINE Alu -11 299 1 970 235 96 106 chr2 245379428 245379879 -7876704 + MER74A LTR ERVL 95 542 -16 1294 247 57 46 chr2 245380295 245380684 -7875899 - MLT1E LTR MaLR 0 593 201 1046 82 29 6 chr2 245380702 245380873 -7875710 + (TTTC)n Simple_repeat Simple_repeat 1 175 0 217 129 0 0 chr2 245380874 245380905 -7875678 + (TTCC)n Simple_repeat Simple_repeat 2 32 0 537 191 0 0 chr2 245380905 245381015 -7875568 + CT-rich Low_complexity Low_complexity 2 111 0 615 293 65 26 chr2 245381017 245381324 -7875259 - L2 LINE L2 -864 2450 2132 486 220 60 60 chr2 245381420 245381602 -7874981 - MLT1E LTR MaLR -409 184 3 810 206 32 92 chr2 245381828 245382110 -7874473 + LTR16A1 LTR ERVL 189 453 -4 375 245 75 19 chr2 245382192 245382298 -7874285 + MIR SINE MIR 46 157 -105 637 336 56 9 chr2 245382909 245383248 -7873335 - L2 LINE L2 -501 2813 2459 701 146 18 9 chr2 245383249 245383359 -7873224 + FRAM SINE Alu 33 143 -33 231 356 38 8 chr2 245383532 245383664 -7872919 - L2 LINE L2 -2881 433 298 891 145 47 23 chr2 245383704 245383876 -7872707 - MLT1B LTR MaLR -191 199 24 424 220 57 43 chr2 245383877 245384018 -7872565 + MIR SINE MIR 96 238 -24 2578 203 69 17 chr2 245384234 245384814 -7871769 - L1ME1 LINE L1 -5 6161 5552 2416 166 61 4 chr2 245385266 245385725 -7870858 - MER31A LTR ERV1 0 485 1 629 264 79 53 chr2 245386548 245386866 -7869717 + LTR52 LTR ERVL 3 328 -93 579 303 0 0 chr2 245388080 245388232 -7868351 - MIR SINE MIR -25 237 86 2762 114 85 67 chr2 245388254 245388844 -7867739 + MER4B LTR ERV1 10 779 0 2137 101 11 3 chr2 245388881 245389167 -7867416 - AluSx SINE Alu -24 288 1 231 286 0 0 chr2 245389925 245389974 -7866609 + L2 LINE L2 3009 3057 -256 417 91 0 0 chr2 245390356 245390411 -7866172 + Alu SINE Alu 1 55 -257 849 282 39 22 chr2 245390591 245390906 -7865677 + MLT1J1 LTR MaLR 1 321 -125 715 289 10 10 chr2 245391702 245391906 -7864677 - MER63A DNA MER1_type 0 210 7 2003 194 67 45 chr2 245393355 245393845 -7862738 - MLT1D LTR MaLR 0 505 5 1478 179 43 92 chr2 245394107 245394499 -7862084 + MLT1A2 LTR MaLR 2 374 0 731 169 22 7 chr2 245395993 245396129 -7860454 - ORSL DNA AcHobo 0 275 138 1251 185 18 64 chr2 245396172 245396453 -7860130 - MLT1B LTR MaLR -3 387 120 745 140 0 0 chr2 245396453 245396567 -7860016 - AluSp/q SINE Alu -12 301 188 830 143 0 0 chr2 245396567 245396693 -7859890 - MLT1B LTR MaLR -264 126 1 3658 150 42 52 chr2 245396762 245397496 -7859087 + LTR8A LTR ERV1 1 727 0 2190 110 3 0 chr2 245397748 245398073 -7858510 + AluSg SINE Alu 1 326 0 2255 101 0 10 chr2 245398743 245399041 -7857542 + AluSg SINE Alu 1 295 -15 991 251 117 38 chr2 245401092 245401459 -7855124 + MSTD LTR MaLR 1 396 0 306 0 0 0 chr2 245401839 245401873 -7854710 + (CA)n Simple_repeat Simple_repeat 2 35 0 295 264 118 0 chr2 245402323 245402433 -7854150 - MLT1I LTR MaLR 0 409 287 255 308 0 11 chr2 245403150 245403241 -7853342 - L1MC4 LINE L1 -1339 6703 6614 1981 163 36 30 chr2 245403497 245403859 -7852724 - THE1B LTR MaLR 0 364 1 10944 83 12 1 chr2 245403859 245405423 -7851160 - THE1B-int LTR MaLR 0 1580 1 2118 148 30 33 chr2 245405423 245405788 -7850795 - THE1B LTR MaLR 0 364 1 1275 184 4 9 chr2 245406110 245406338 -7850245 - AluJo SINE Alu -2 310 84 200 195 232 37 chr2 245407240 245407322 -7849261 + L2 LINE L2 3166 3263 -9 393 173 0 27 chr2 245407334 245407409 -7849174 + MER116 DNA Mariner 2 74 -6 183 264 0 0 chr2 245407974 245408027 -7848556 + CT-rich Low_complexity Low_complexity 76 128 0 1330 177 126 48 chr2 245408239 245408652 -7847931 + LTR56 LTR ERV1 1 445 0 180 333 0 0 chr2 245408699 245408753 -7847830 - MIR SINE MIR -8 254 201 2024 22 0 4 chr2 245409118 245409344 -7847239 - AluY SINE Alu -12 299 75 24 32 0 0 chr2 245409425 245409456 -7847127 + AT_rich Low_complexity Low_complexity 1 31 0 459 250 0 0 chr2 245409831 245409939 -7846644 + MIR3 SINE MIR 87 194 -14 270 0 0 0 chr2 245410142 245410172 -7846411 + (GA)n Simple_repeat Simple_repeat 1 30 0 405 211 113 30 chr2 245410690 245410823 -7845760 + L2 LINE L2 3164 3307 -6 228 208 21 0 chr2 245411042 245411090 -7845493 - MLT1G1 LTR MaLR 0 595 547 2791 266 58 26 chr2 245411115 245411466 -7845117 - L2 LINE L2 -648 2666 2328 1940 168 111 13 chr2 245411466 245411691 -7844892 - MSTB LTR MaLR -1 425 223 2422 97 0 0 chr2 245411691 245412001 -7844582 - AluY SINE Alu -1 310 1 2226 107 0 0 chr2 245412003 245412293 -7844290 - AluSx SINE Alu -18 294 5 1940 168 111 13 chr2 245412293 245412451 -7844132 - MSTB LTR MaLR -203 223 1 2791 266 58 26 chr2 245412451 245413194 -7843389 - L2 LINE L2 -986 2328 1537 308 354 58 0 chr2 245413301 245413507 -7843076 - MIR SINE MIR 0 262 45 319 278 107 8 chr2 245413982 245414108 -7842475 - MIR SINE MIR -62 146 30 470 95 42 0 chr2 245414953 245415048 -7841535 + (TG)n Simple_repeat Simple_repeat 1 99 0 223 265 193 0 chr2 245416295 245416378 -7840205 + MIR SINE MIR 46 144 -118 1777 141 11 3 chr2 245416818 245417101 -7839482 - L1PA15 LINE L1 0 6165 5881 429 330 107 0 chr2 245417920 245418117 -7838466 + L3 LINE CR1 1254 1471 -106 957 249 101 54 chr2 245418121 245418587 -7837996 - MLT1G1 LTR MaLR 0 595 108 24 85 0 0 chr2 245419313 245419372 -7837211 + AT_rich Low_complexity Low_complexity 1 59 0 2168 127 0 0 chr2 245419380 245419671 -7836912 - AluSg SINE Alu -19 291 1 7825 81 2 2 chr2 245419833 245420802 -7835781 - LTR5 LTR ERVK 0 969 1 230 241 19 0 chr2 245420851 245420905 -7835678 - L2 LINE L2 -5 3267 3213 991 208 196 70 chr2 245420973 245421376 -7835207 - MLT1C LTR MaLR -3 464 11 322 335 119 10 chr2 245421376 245421570 -7835013 - MIR SINE MIR -46 216 2 2433 56 0 34 chr2 245422187 245422509 -7834074 - AluY SINE Alu 0 311 1 1089 45 8 8 chr2 245422509 245422643 -7833940 - AluY SINE Alu -177 134 1 198 0 0 0 chr2 245422643 245422665 -7833918 + (T)n Simple_repeat Simple_repeat 1 22 0 232 288 34 68 chr2 245424595 245424741 -7831842 - MER5A DNA MER1_type -28 161 21 25 51 0 0 chr2 245424784 245424823 -7831760 + AT_rich Low_complexity Low_complexity 1 39 0 2266 108 0 0 chr2 245425201 245425487 -7831096 + AluSx SINE Alu 3 288 -24 620 209 15 80 chr2 245425654 245425855 -7830728 - MER20 DNA MER1_type 0 219 32 195 42 0 0 chr2 245426141 245426165 -7830418 + (A)n Simple_repeat Simple_repeat 1 24 0 373 320 67 16 chr2 245426622 245426816 -7829767 + L1ME LINE L1 5602 5805 -316 21 0 0 0 chr2 245426818 245426839 -7829744 + AT_rich Low_complexity Low_complexity 1 21 0 903 139 0 0 chr2 245426839 245426961 -7829622 - AluSg/x SINE Alu -25 285 164 2591 145 26 9 chr2 245426992 245427413 -7829170 - MSTA LTR MaLR 0 428 1 505 252 58 0 chr2 245427522 245427661 -7828922 + MLT1I LTR MaLR 4 150 -259 218 197 0 45 chr2 245427750 245427816 -7828767 + CT-rich Low_complexity Low_complexity 2 64 0 21 36 0 0 chr2 245428121 245428149 -7828434 + AT_rich Low_complexity Low_complexity 1 28 0 2261 100 0 7 chr2 245428196 245428497 -7828086 - AluSc SINE Alu -10 299 1 2138 123 0 3 chr2 245428570 245428863 -7827720 + AluSx SINE Alu 1 292 -20 198 0 0 0 chr2 245429532 245429554 -7827029 + (T)n Simple_repeat Simple_repeat 1 22 0 1993 102 38 24 chr2 245429769 245430062 -7826521 + AluSc SINE Alu 1 297 -12 641 335 10 0 chr2 245430449 245430658 -7825925 + LTR33 LTR ERVL 28 238 -283 477 294 37 0 chr2 245430705 245430841 -7825742 + LTR33 LTR ERVL 362 502 -19 2190 171 113 19 chr2 245430874 245431336 -7825247 - MLT1D LTR MaLR 0 505 1 610 182 0 0 chr2 245431604 245431743 -7824840 + FLAM_A SINE Alu 32 170 0 1126 164 0 0 chr2 245431746 245431923 -7824660 + AluJo/FRAM SINE Alu 136 312 0 227 314 105 40 chr2 245432518 245432642 -7823941 - L2 LINE L2 -4 3268 3137 318 244 149 60 chr2 245433028 245433196 -7823387 - L2 LINE L2 -26 3246 3064 621 327 50 22 chr2 245433638 245433674 -7822909 - L1ME LINE L1 -345 5776 5742 741 291 0 0 chr2 245433674 245433880 -7822703 - MER3 DNA MER1_type -3 206 1 621 327 50 22 chr2 245433880 245434282 -7822301 - L1ME LINE L1 -379 5742 5385 204 189 0 0 chr2 245434629 245434666 -7821917 - MIR SINE MIR 0 262 226 554 97 0 0 chr2 245434945 245435063 -7821520 + AluSg/x SINE Alu 211 328 0 1945 150 0 0 chr2 245435238 245435518 -7821065 + AluSx SINE Alu 1 280 -32 1067 70 17 17 chr2 245435520 245435692 -7820891 + (GAAA)n Simple_repeat Simple_repeat 2 173 0 436 133 24 0 chr2 245435713 245435796 -7820787 + GA-rich Low_complexity Low_complexity 3 87 0 270 352 103 32 chr2 245435798 245436139 -7820444 - MLT1K LTR MaLR -27 561 197 1488 171 97 17 chr2 245436370 245436733 -7819850 + MLT1C LTR MaLR 20 459 -8 308 293 57 0 chr2 245437891 245437997 -7818586 + L2 LINE L2 3202 3313 0 199 345 0 0 chr2 245438145 245438200 -7818383 - L2 LINE L2 -84 3188 3134 215 219 41 0 chr2 245438462 245438535 -7818048 + (TATAA)n Simple_repeat Simple_repeat 2 77 0 2708 89 5 24 chr2 245438698 245439069 -7817514 + THE1B LTR MaLR 1 364 0 449 311 19 15 chr2 245439203 245439409 -7817174 + L2 LINE L2 3103 3309 -4 809 264 40 0 chr2 245439745 245439946 -7816637 + MER63A DNA MER1_type 2 210 0 334 217 140 21 chr2 245440650 245440793 -7815790 + L1ME4a LINE L1 5962 6121 0 1016 243 86 0 chr2 245441096 245441363 -7815220 - LTR55 LTR ERV -9 539 250 325 95 0 0 chr2 245441366 245441408 -7815175 + 5S rRNA rRNA 1 42 -79 1316 142 10 5 chr2 245441460 245441665 -7814918 - LTR55 LTR ERV -340 208 3 1463 308 62 45 chr2 245441981 245443675 -7812908 + L1ME LINE L1 2216 3937 -2209 1830 165 11 62 chr2 245443709 245444078 -7812505 + REP3 LTR ERV 29 378 -184 6777 26 0 0 chr2 245444083 245444853 -7811730 - L1PA3 LINE L1 0 6155 5386 6514 22 0 0 chr2 245444857 245445613 -7810970 + L1PA3 LINE L1 4613 5368 -778 703 201 32 32 chr2 245445614 245445768 -7810815 + REP3 LTR ERV 365 518 -44 318 275 55 51 chr2 245445776 245446138 -7810445 + L1ME LINE L1 5106 5469 -652 1719 232 68 27 chr2 245447566 245448010 -7808573 - MLT1C LTR MaLR 0 467 6 202 316 0 0 chr2 245448157 245448214 -7808369 - L2 LINE L2 0 3313 3257 2581 132 26 26 chr2 245448582 245448624 -7807959 - MSTA LTR MaLR 0 428 387 1885 138 28 3 chr2 245448624 245448913 -7807670 + AluSx SINE Alu 1 296 -16 2581 132 26 26 chr2 245448913 245449296 -7807287 - MSTA LTR MaLR -40 388 3 327 65 0 0 chr2 245449752 245449798 -7806785 + (CA)n Simple_repeat Simple_repeat 1 46 0 387 0 0 0 chr2 245450106 245450149 -7806434 + (CA)n Simple_repeat Simple_repeat 2 44 0 285 29 0 0 chr2 245450148 245450182 -7806401 + (GA)n Simple_repeat Simple_repeat 2 35 0 * 472 130 25 68 chr2 245450203 245450364 -7806219 + CT-rich Low_complexity Low_complexity 3 156 0 2409 66 27 7 chr2 245451109 245451410 -7805173 + AluY SINE Alu 5 311 0 286 254 35 35 chr2 245452852 245452966 -7803617 + MLT1H LTR MaLR 41 154 -395 1721 187 0 0 chr2 245454552 245454871 -7801712 - AluJo SINE Alu 0 323 5 1758 168 13 25 chr2 245455413 245455728 -7800855 + AluJb SINE Alu 1 311 -1 453 252 72 0 chr2 245455754 245455893 -7800690 - L1ME3A LINE L1 -2 6168 6020 335 263 54 54 chr2 245455899 245456104 -7800479 - L1ME3A LINE L1 -198 5972 5768 341 305 11 26 chr2 245456259 245456449 -7800134 - L1MC4 LINE L1 0 8042 7856 438 204 117 0 chr2 245456453 245456556 -7800027 - L1MC4 LINE L1 -815 7227 7113 1669 261 93 72 chr2 245456560 245457614 -7798969 - L1MC4 LINE L1 -98 7944 6869 405 292 114 19 chr2 245458013 245458422 -7798161 + L2 LINE L2 2814 3297 -16 1295 210 181 9 chr2 245458610 245458948 -7797635 - MSTD LTR MaLR 0 396 1 231 233 41 68 chr2 245459402 245459475 -7797108 + L2 LINE L2 3243 3313 0 2317 107 3 0 chr2 245459487 245459797 -7796786 + AluSq SINE Alu 3 313 0 6272 96 11 1 chr2 245460358 245462012 -7794571 - L1PA13 LINE L1 0 6163 4514 2229 116 0 10 chr2 245462141 245462452 -7794131 - AluY SINE Alu -3 308 1 325 277 71 21 chr2 245462510 245462651 -7793932 - L1M4 LINE L1 -2910 3236 3089 279 173 0 0 chr2 245462677 245462729 -7793854 + (CA)n Simple_repeat Simple_repeat 1 52 0 22 0 0 0 chr2 245463793 245463815 -7792768 + AT_rich Low_complexity Low_complexity 1 22 0 231 236 180 0 chr2 245463815 245463904 -7792679 - MER103 DNA DNA 0 166 62 2379 50 36 13 chr2 245465449 245465751 -7790832 + AluY SINE Alu 3 311 0 2132 107 0 3 chr2 245466028 245466352 -7790231 + AluSx SINE Alu 1 323 0 394 335 25 31 chr2 245466814 245466975 -7789608 + MER5B DNA MER1_type 18 177 -1 2280 81 3 0 chr2 245467478 245467785 -7788798 - AluSx SINE Alu 0 308 1 313 301 0 23 chr2 245468188 245468321 -7788262 - L1ME LINE L1 -491 5630 5501 382 103 17 0 chr2 245468688 245468746 -7787837 + MADE1 DNA Mariner 1 59 -21 269 209 45 0 chr2 245469332 245469399 -7787184 + L1MC5 LINE L1 7815 7884 -77 2419 89 0 10 chr2 245469681 245469994 -7786589 + AluSg SINE Alu 1 310 0 211 233 0 0 chr2 245470424 245470467 -7786116 + (TG)n Simple_repeat Simple_repeat 1 43 0 191 259 157 0 chr2 245470912 245471020 -7785563 - MIR SINE MIR -64 198 74 436 224 45 45 chr2 245471049 245471205 -7785378 + L1MC5 LINE L1 7776 7931 -30 21 0 0 0 chr2 245472462 245472483 -7784100 + AT_rich Low_complexity Low_complexity 1 21 0 943 59 0 8 chr2 245472757 245472875 -7783708 + L1PA4 LINE L1 6019 6135 -20 198 0 0 0 chr2 245472878 245472900 -7783683 + (TAA)n Simple_repeat Simple_repeat 3 24 0 23568 113 10 17 chr2 245472902 245476461 -7780122 - L1P LINE L1 -2596 3550 16 245 167 74 0 chr2 245476581 245476635 -7779948 + MST-int LTR MaLR 217 274 -1377 1754 150 83 44 chr2 245476747 245477108 -7779475 + THE1C LTR MaLR 1 375 0 9825 123 48 15 chr2 245477108 245478638 -7777945 + THE1C-int LTR MaLR 1 1580 0 2028 141 18 59 chr2 245478638 245479029 -7777554 + THE1C LTR MaLR 1 375 0 698 221 63 0 chr2 245479715 245479873 -7776710 + FRAM SINE Alu 1 163 -13 2973 130 47 12 chr2 245480878 245481372 -7775211 - MER9 LTR ERVK 0 511 1 410 256 94 0 chr2 245481447 245481564 -7775019 + MLT1D LTR MaLR 332 459 -46 1860 175 82 26 chr2 245483185 245483614 -7772969 - Charlie1b DNA MER1_type -69 454 2 849 185 39 19 chr2 245483624 245483829 -7772754 + MER2 DNA MER2_type 2 210 -135 197 363 89 20 chr2 245485352 245485498 -7771085 + L2 LINE L2 3117 3272 0 4839 148 55 24 chr2 245535685 245535883 -7720700 - L1MDa LINE L1 -3939 2601 2411 1058 108 38 0 chr2 245535883 245536040 -7720543 - L1MA5 LINE L1 -2 6298 6136 4839 148 55 24 chr2 245536040 245536827 -7719756 - L1MDa LINE L1 -4129 2411 1588 333 343 98 34 chr2 245537095 245537316 -7719267 + L2 LINE L2 1853 2058 -1256 2501 84 0 0 chr2 245537316 245537625 -7718958 - AluSg SINE Alu -1 309 1 333 343 98 34 chr2 245537625 245537841 -7718742 + L2 LINE L2 2058 2318 -996 286 197 68 51 chr2 245538540 245538657 -7717926 - L1ME4a LINE L1 -11 6110 5992 224 262 0 24 chr2 245538806 245538890 -7717693 + (TTATA)n Simple_repeat Simple_repeat 3 84 0 2130 122 0 3 chr2 245539090 245539384 -7717199 - AluSq SINE Alu -20 293 1 707 284 84 13 chr2 245540666 245540905 -7715678 - MIR SINE MIR 0 262 7 2083 109 7 3 chr2 245541962 245542247 -7714336 + AluSg SINE Alu 1 286 -24 2325 33 4 0 chr2 245542247 245542522 -7714061 + L1PA4 LINE L1 5820 6095 -60 1560 106 0 0 chr2 245542624 245542832 -7713751 + AluSg/x SINE Alu 95 302 -10 2094 138 6 3 chr2 245543283 245543595 -7712988 - AluSq SINE Alu 0 313 1 2648 43 0 0 chr2 245543922 245544223 -7712360 - AluY SINE Alu -10 301 1 1543 108 0 52 chr2 245544350 245544581 -7712002 + AluSp SINE Alu 1 219 -94 503 133 27 0 chr2 245544710 245544785 -7711798 + AluS SINE Alu 224 300 -10 2426 97 3 0 chr2 245544790 245545099 -7711484 + AluSp SINE Alu 2 311 -2 2310 127 32 24 chr2 245545272 245545642 -7710941 + THE1C LTR MaLR 1 373 -2 774 214 60 11 chr2 245546171 245546353 -7710230 - MLT1D LTR MaLR -139 366 176 282 152 0 0 chr2 245546541 245546587 -7709996 - FLAM_A SINE Alu 0 133 88 1537 135 0 0 chr2 245546587 245546802 -7709781 - AluY SINE Alu -96 215 1 219 229 0 0 chr2 245547197 245547245 -7709338 + (CA)n Simple_repeat Simple_repeat 1 48 0 362 304 128 41 chr2 245547624 245548039 -7708544 - L1ME4a LINE L1 -185 5936 5486 248 156 0 0 chr2 245548139 245548184 -7708399 + Alu SINE Alu 258 302 0 204 255 0 0 chr2 245548703 245548754 -7707829 - L2 LINE L2 0 3272 3222 2082 118 0 13 chr2 245549356 245549662 -7706921 + AluSg SINE Alu 1 302 -8 1581 105 0 10 chr2 245550034 245550243 -7706340 - AluSq SINE Alu -106 207 1 681 251 97 32 chr2 245551598 245551877 -7704706 + MLT1J1 LTR MaLR 12 308 -138 1873 177 0 0 chr2 245552251 245552551 -7704032 - AluSx SINE Alu -12 300 1 186 300 0 0 chr2 245553313 245553453 -7703130 + (TG)n Simple_repeat Simple_repeat 2 141 0 221 0 35 0 chr2 245554036 245554065 -7702518 + (TG)n Simple_repeat Simple_repeat 2 31 0 1459 198 23 45 chr2 245554523 245554738 -7701845 + MLT1E2 LTR MaLR 269 474 -152 2319 78 3 47 chr2 245554738 245555057 -7701526 - AluY SINE Alu -6 305 1 1459 198 23 45 chr2 245555057 245555194 -7701389 + MLT1E2 LTR MaLR 474 613 -13 282 305 76 0 chr2 245555336 245555441 -7701142 - L1ME4a LINE L1 -612 5509 5397 1981 140 0 23 chr2 245555982 245556282 -7700301 + AluSq SINE Alu 3 295 -18 501 348 90 0 chr2 245556325 245556635 -7699948 + L1ME4a LINE L1 5509 5846 -275 2380 108 0 0 chr2 245556862 245557169 -7699414 - AluSx SINE Alu -5 307 1 278 287 57 25 chr2 245558648 245558770 -7697813 + MIR3 SINE MIR 48 173 -35 3847 182 103 21 chr2 245559454 245560252 -7696331 - MER21B LTR ERV1 0 863 1 314 303 67 22 chr2 245560477 245560655 -7695928 - L2 LINE L2 -541 2773 2588 668 120 226 0 chr2 245561490 245561623 -7694960 - L1MD2 LINE L1 -3 6356 6194 2035 116 7 14 chr2 245562046 245562331 -7694252 + AluSq SINE Alu 17 299 -14 273 143 0 0 chr2 245562777 245562826 -7693757 + AluSc SINE Alu 251 299 0 2164 129 0 0 chr2 245563006 245563308 -7693275 - AluSx SINE Alu -10 302 1 671 301 102 8 chr2 245563354 245563610 -7692973 + LTR16B LTR ERVL 185 464 0 1987 164 59 3 chr2 245565258 245565647 -7690936 - L1MC3 LINE L1 -21 7764 7354 439 335 119 34 chr2 245566600 245567297 -7689286 + L2 LINE L2 2485 3308 -5 2540 203 89 65 chr2 245567442 245568453 -7688130 + L1ME2 LINE L1 5125 6154 -10 1878 128 68 46 chr2 245568960 245569327 -7687256 + THE1C LTR MaLR 1 375 0 2053 153 13 0 chr2 245569434 245569742 -7686841 - AluSx SINE Alu 0 312 1 1723 194 67 60 chr2 245569877 245570341 -7686242 + MLT1C LTR MaLR 1 467 0 2330 92 0 0 chr2 245571355 245571647 -7684936 + AluSx SINE Alu 5 296 -16 276 234 39 0 chr2 245571707 245571784 -7684799 - MIR SINE MIR -90 118 39 1105 230 128 21 chr2 245572576 245573011 -7683572 + L1MA9 LINE L1 656 1043 -5338 342 45 0 0 chr2 245573011 245573055 -7683528 + (CA)n Simple_repeat Simple_repeat 1 44 0 1105 230 128 21 chr2 245573055 245573159 -7683424 + L1MA9 LINE L1 1043 6356 -25 31 26 0 0 chr2 245573159 245573197 -7683386 + AT_rich Low_complexity Low_complexity 1 38 0 731 306 89 8 chr2 245573252 245573831 -7682752 + L1MEd LINE L1 996 1667 -4729 22 0 0 0 chr2 245573981 245574003 -7682580 + AT_rich Low_complexity Low_complexity 1 22 0 2072 143 29 38 chr2 245574164 245574600 -7681983 + MER51B LTR ERV1 1 375 -2 877 293 122 16 chr2 245574666 245575384 -7681199 + L1MEd LINE L1 2143 2890 -3325 216 97 0 0 chr2 245575411 245575442 -7681141 + (CA)n Simple_repeat Simple_repeat 2 32 0 253 264 9 57 chr2 245575564 245575670 -7680913 + MER103 DNA DNA 61 161 -5 21 0 0 0 chr2 245575989 245576010 -7680573 + AT_rich Low_complexity Low_complexity 1 21 0 1620 187 156 67 chr2 245576535 245576675 -7679908 + MLT1F1 LTR MaLR 3 129 -438 2211 110 0 0 chr2 245576675 245576997 -7679586 - AluSx SINE Alu 0 312 1 1620 187 156 67 chr2 245576997 245577375 -7679208 + MLT1F1 LTR MaLR 129 567 0 2033 208 65 53 chr2 245577579 245577649 -7678934 + L1MC4a LINE L1 5763 5831 -1977 2025 106 0 38 chr2 245577649 245577785 -7678798 + AluSq SINE Alu 1 141 -172 2447 78 0 10 chr2 245577785 245578092 -7678491 + AluY SINE Alu 1 304 -7 2025 106 0 38 chr2 245578092 245578247 -7678336 + AluSq SINE Alu 141 281 -32 210 37 0 0 chr2 245578247 245578274 -7678309 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 2033 208 65 53 chr2 245578274 245578876 -7677707 + L1MC4a LINE L1 5830 6444 -1364 680 184 79 0 chr2 245579506 245579658 -7676925 + L1MD1 LINE L1 6079 6242 0 2429 74 7 0 chr2 245580024 245580320 -7676263 - AluY SINE Alu -13 298 1 183 80 0 0 chr2 245580529 245580554 -7676029 + (TG)n Simple_repeat Simple_repeat 2 26 0 1582 99 0 0 chr2 245580651 245580853 -7675730 - AluSq SINE Alu -12 301 100 189 94 0 0 chr2 245581345 245581377 -7675206 + (A)n Simple_repeat Simple_repeat 1 32 0 748 175 117 12 chr2 245582137 245582308 -7674275 - MER5A DNA MER1_type 0 189 1 789 184 0 0 chr2 245583218 245583343 -7673240 - FLAM_A SINE Alu -8 125 1 1058 213 80 117 chr2 245583443 245583954 -7672629 + MLT1H LTR MaLR 58 549 0 2135 109 59 45 chr2 245585762 245586119 -7670464 - THE1B LTR MaLR 0 364 3 452 273 14 0 chr2 245586140 245586279 -7670304 - L2 LINE L2 -742 2572 2432 245 298 21 21 chr2 245586429 245586523 -7670060 + MER112 DNA MER1_type 89 182 -78 369 271 125 83 chr2 245587237 245587510 -7669073 - L1M4 LINE L1 -1818 4328 4031 2403 102 3 0 chr2 245587510 245587815 -7668768 - AluSp SINE Alu -7 306 1 369 271 125 83 chr2 245587815 245587950 -7668633 - L1M4 LINE L1 -2115 4031 3903 26 64 0 0 chr2 245588143 245588190 -7668393 + AT_rich Low_complexity Low_complexity 1 47 0 915 104 0 8 chr2 245588267 245588392 -7668191 + THE1B LTR MaLR 241 364 0 906 87 0 0 chr2 245588484 245588599 -7667984 - AluSq/x SINE Alu -171 142 28 2285 119 0 0 chr2 245589099 245589410 -7667173 - AluSx SINE Alu -1 311 1 215 79 26 0 chr2 245589600 245589638 -7666945 + (CAAAA)n Simple_repeat Simple_repeat 5 43 0 242 300 0 0 chr2 245590576 245590626 -7665957 + MIR SINE MIR 32 81 -181 462 256 31 8 chr2 245590639 245590768 -7665815 - L2 LINE L2 0 3313 3182 2631 148 18 98 chr2 245590876 245591436 -7665147 + LTR12 LTR ERV1 67 581 -133 1840 116 112 7 chr2 245591436 245591739 -7664844 + MSTA LTR MaLR 94 428 0 365 224 14 65 chr2 245591838 245591963 -7664620 + MLT1J LTR MaLR 287 487 -128 311 262 74 0 chr2 245595069 245595191 -7661392 + L2 LINE L2 3160 3290 -23 2262 109 0 0 chr2 245596004 245596307 -7660276 + AluSg SINE Alu 1 303 -7 533 261 7 26 chr2 245596323 245596476 -7660107 - MIR SINE MIR -111 151 2 816 159 31 0 chr2 245596542 245596705 -7659878 - MER53 DNA DNA -17 172 5 188 67 33 0 chr2 245596913 245596943 -7659640 + (CA)n Simple_repeat Simple_repeat 1 31 0 1523 167 3 60 chr2 245597100 245597417 -7659166 - AluJo SINE Alu -10 302 4 210 37 0 0 chr2 245599076 245599103 -7657480 + (TG)n Simple_repeat Simple_repeat 1 27 0 365 289 64 17 chr2 245599642 245599815 -7656768 + MIR SINE MIR 26 206 -56 352 233 121 52 chr2 245599947 245600063 -7656520 - L2 LINE L2 -6 3307 3184 2264 141 11 27 chr2 245600175 245600544 -7656039 + THE1B LTR MaLR 2 364 0 180 0 0 0 chr2 245600546 245600566 -7656017 + (CCCTAA)n Simple_repeat Simple_repeat 1 20 0 598 193 29 0 chr2 245601642 245601813 -7654770 + (CCCCAG)n Simple_repeat Simple_repeat 4 179 0 807 135 35 0 chr2 245601828 245601998 -7654585 + (CCCCAG)n Simple_repeat Simple_repeat 4 179 0 291 37 0 112 chr2 245601981 245602088 -7654495 + (CACCT)n Simple_repeat Simple_repeat 3 97 0 * 2331 108 0 0 chr2 245602891 245603188 -7653395 + AluSg SINE Alu 2 298 -12 334 267 53 53 chr2 245604012 245604143 -7652440 + MER94 DNA DNA 2 132 -2 2424 152 28 30 chr2 245604664 245605091 -7651492 + MSTB LTR MaLR 1 426 0 304 239 58 58 chr2 245605309 245605464 -7651119 + L1 LINE L1 3115 3269 -2877 876 89 0 0 chr2 245605589 245605712 -7650871 + (TTTC)n Simple_repeat Simple_repeat 2 124 0 2058 113 3 14 chr2 245605722 245606006 -7650577 - AluSp SINE Alu -30 283 3 193 246 53 0 chr2 245606010 245606067 -7650516 + L2 LINE L2 3230 3289 -24 1667 141 90 34 chr2 245606714 245607069 -7649514 - THE1C LTR MaLR 0 375 1 3724 178 75 7 chr2 245607163 245607898 -7648685 + LTR48 LTR ERV1 1 785 -2 2467 84 0 0 chr2 245608137 245608445 -7648138 + AluY SINE Alu 1 308 -3 25 0 0 0 chr2 245608483 245608508 -7648075 + AT_rich Low_complexity Low_complexity 1 25 0 806 251 101 9 chr2 245608768 245608995 -7647588 + MER21B LTR ERV1 1 248 -615 1819 192 20 14 chr2 245609025 245609424 -7647159 + MER21B LTR ERV1 422 754 -109 2026 110 0 4 chr2 245609968 245610241 -7646342 + AluSc SINE Alu 1 272 -37 2562 66 0 0 chr2 245610695 245610999 -7645584 + AluY SINE Alu 1 304 -7 1073 104 0 0 chr2 245611131 245611265 -7645318 - AluSg SINE Alu -176 134 1 195 229 0 0 chr2 245611359 245611394 -7645189 - MIR SINE MIR -147 115 81 329 286 137 6 chr2 245611413 245611467 -7645116 + L2 LINE L2 3118 3164 -149 189 0 0 0 chr2 245611467 245611488 -7645095 + (TC)n Simple_repeat Simple_repeat 2 22 0 329 286 137 6 chr2 245611488 245611594 -7644989 + L2 LINE L2 3164 3299 -14 309 293 47 24 chr2 245611644 245611856 -7644727 - L2 LINE L2 -220 3052 2836 1938 156 143 11 chr2 245612060 245612438 -7644145 + MSTA LTR MaLR 1 428 0 1372 270 43 54 chr2 245612450 245613693 -7642890 + L1ME3A LINE L1 4698 5888 -274 2174 143 87 50 chr2 245613702 245614290 -7642293 - MER4A LTR ERV1 0 465 1 608 226 91 53 chr2 245614290 245614555 -7642028 + L1ME3A LINE L1 5878 6152 -18 747 162 39 13 chr2 245614555 245614709 -7641874 + MER65A LTR ERV1 1 158 -287 195 129 0 0 chr2 245614767 245614798 -7641785 + (TA)n Simple_repeat Simple_repeat 1 31 0 354 246 76 68 chr2 245614823 245615087 -7641496 + MER65A LTR ERV1 180 445 0 632 200 15 7 chr2 245615118 245615253 -7641330 + L1MD2 LINE L1 6062 6197 -162 2664 154 60 36 chr2 245615253 245615343 -7641240 - MER34C LTR ERV1 -13 572 486 5122 90 13 10 chr2 245615343 245616032 -7640551 + LTR8 LTR ERV1 1 691 0 2664 154 60 36 chr2 245616032 245616461 -7640122 - MER34C LTR ERV1 -99 486 41 511 138 138 76 chr2 245616464 245616516 -7640067 + L1MD2 LINE L1 6194 6241 -118 2204 119 3 13 chr2 245616516 245616826 -7639757 + AluSx SINE Alu 2 308 -4 511 138 138 76 chr2 245616826 245616918 -7639665 + L1MD2 LINE L1 6241 6347 -12 28 79 0 0 chr2 245618407 245618470 -7638113 + AT_rich Low_complexity Low_complexity 1 63 0 2516 136 46 5 chr2 245618528 245618939 -7637644 - MSTA LTR MaLR 0 428 1 2023 207 39 13 chr2 245619400 245619864 -7636719 + L1MD1 LINE L1 5646 6121 -121 664 111 0 0 chr2 245619864 245619954 -7636629 + AluSg SINE Alu 2 91 -219 237 276 0 66 chr2 245620845 245620921 -7635662 + MLT1F LTR MaLR 216 286 -304 313 245 14 3 chr2 245621023 245621114 -7635469 + MLT1F LTR MaLR 400 501 -54 342 232 166 33 chr2 245621400 245621551 -7635032 - MLT1K LTR MaLR -122 466 296 2098 131 3 19 chr2 245622058 245622234 -7634349 - AluSx SINE Alu -3 309 139 2244 102 0 7 chr2 245622234 245622538 -7634045 - AluSg SINE Alu -6 304 3 2098 131 3 19 chr2 245622538 245622675 -7633908 - AluSx SINE Alu -173 139 1 1874 153 29 3 chr2 245623680 245623988 -7632595 + THE1B LTR MaLR 1 316 -48 297 273 83 62 chr2 245624036 245624072 -7632511 - L1M4 LINE L1 -1446 4700 4666 2353 109 3 0 chr2 245624072 245624384 -7632199 - AluSp SINE Alu 0 313 1 297 273 83 62 chr2 245624384 245624501 -7632082 - L1M4 LINE L1 -1480 4666 4553 2169 107 21 3 chr2 245624501 245624791 -7631792 - AluSq SINE Alu -18 295 1 297 273 83 62 chr2 245624791 245624973 -7631610 - L1M4 LINE L1 -1593 4553 4357 683 110 10 0 chr2 245625199 245625299 -7631284 + MSTD LTR MaLR 1 101 -295 2158 112 3 17 chr2 245625299 245625594 -7630989 + AluSg SINE Alu 1 291 -19 282 293 57 8 chr2 245625648 245625785 -7630798 + L1PA8A LINE L1 5672 5814 -307 10676 150 21 13 chr2 245625893 245627909 -7628674 - L1P4 LINE L1 -685 5476 3451 317 264 16 8 chr2 245628233 245628354 -7628229 + (TG)n Simple_repeat Simple_repeat 2 123 0 1553 139 54 67 chr2 245628706 245628895 -7627688 + MER4E LTR ERV1 1 191 -575 1675 97 113 19 chr2 245628895 245629152 -7627431 + AluSg SINE Alu 6 286 -24 246 95 0 0 chr2 245629155 245629197 -7627386 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 1553 139 54 67 chr2 245629197 245629466 -7627117 + MER4E LTR ERV1 193 766 0 2412 95 0 0 chr2 245629519 245629823 -7626760 + AluSx SINE Alu 1 304 -8 2190 100 0 10 chr2 245631298 245631615 -7624968 + AluSx SINE Alu 1 314 0 4066 117 39 7 chr2 245631631 245632245 -7624338 + MER41B LTR ERV1 2 635 0 1829 158 20 35 chr2 245632471 245632818 -7623765 + MER2 DNA MER2_type 1 342 -2 426 282 54 52 chr2 245633053 245633307 -7623276 - L1ME LINE L1 -303 5818 5592 2057 157 0 0 chr2 245634506 245634811 -7621772 - AluJb SINE Alu -7 305 1 500 221 54 107 chr2 245634848 245635128 -7621455 - MLT1I LTR MaLR -40 369 105 333 237 9 130 chr2 245636516 245636731 -7619852 - L1ME4a LINE L1 -276 5845 5657 474 182 97 56 chr2 245636948 245637036 -7619547 - MER34 LTR ERV1 -8 577 494 1950 120 62 0 chr2 245637036 245637310 -7619273 + AluSx SINE Alu 1 291 -21 474 182 97 56 chr2 245637310 245637386 -7619197 - MER34 LTR ERV1 -91 494 370 696 45 0 0 chr2 245637495 245637583 -7619000 + (GGGAA)n Simple_repeat Simple_repeat 2 89 0 22 0 0 0 chr2 245638255 245638277 -7618306 + AT_rich Low_complexity Low_complexity 1 22 0 400 316 73 28 chr2 245638585 245638832 -7617751 + MIR SINE MIR 4 261 -1 185 216 0 0 chr2 245638855 245638892 -7617691 + L2 LINE L2 3265 3301 -12 208 250 0 0 chr2 245639544 245639584 -7616999 + polypurine Low_complexity Low_complexity 4 43 0 197 248 162 19 chr2 245639679 245639784 -7616799 - MER5A DNA MER1_type -7 182 63 1122 118 0 0 chr2 245640757 245640918 -7615665 - AluSq SINE Alu -2 311 151 282 188 0 31 chr2 245641016 245641080 -7615503 + MER103 DNA DNA 15 76 -90 253 240 154 51 chr2 245642189 245642364 -7614219 + L1ME LINE L1 4080 4272 -1874 189 154 15 62 chr2 245642468 245642533 -7614050 + (TATG)n Simple_repeat Simple_repeat 1 62 0 3930 173 41 60 chr2 245642767 245643739 -7612844 - LTR13 LTR ERVK 0 954 1 2410 93 0 7 chr2 245644194 245644504 -7612079 + AluSg SINE Alu 1 308 -2 1851 159 0 44 chr2 245644798 245645118 -7611465 + AluJo SINE Alu 5 310 -2 896 215 0 0 chr2 245645678 245645841 -7610742 + FRAM SINE Alu 1 163 -3 2378 107 0 3 chr2 245646073 245646382 -7610201 + AluSg SINE Alu 1 308 -2 585 251 24 18 chr2 245646529 245646696 -7609887 + L1ME LINE L1 5478 5645 -476 197 275 33 75 chr2 245646848 245646968 -7609615 - MIR SINE MIR -70 192 78 364 311 0 17 chr2 245647499 245647618 -7608965 - MER5A DNA MER1_type 0 189 73 946 230 0 0 chr2 245648123 245648301 -7608282 + MER45A DNA AcHobo 1 178 0 2335 72 20 3 chr2 245648553 245648845 -7607738 - AluSc SINE Alu -12 297 1 247 259 223 9 chr2 245649964 245650147 -7606436 - MIR SINE MIR -4 258 32 567 29 0 0 chr2 245650191 245650260 -7606323 + (TTCC)n Simple_repeat Simple_repeat 4 72 0 2134 101 0 3 chr2 245650265 245650561 -7606022 - AluSc SINE Alu -14 295 1 1580 187 57 64 chr2 245650590 245651060 -7605523 + MLT1C LTR MaLR 1 467 0 267 154 92 0 chr2 245651590 245651655 -7604928 - Charlie2 DNA MER1_type -64 2798 2728 1129 152 28 33 chr2 245651671 245651882 -7604701 + Tigger2 DNA MER2_type 1 210 -2508 528 114 0 0 chr2 245651881 245651960 -7604623 + Tigger2 DNA MER2_type 2564 2642 -76 * 2214 111 0 0 chr2 245652826 245653132 -7603451 + AluSx SINE Alu 6 311 -1 751 224 133 26 chr2 245653199 245653330 -7603253 - MLT1C LTR MaLR 0 467 351 3394 123 54 0 chr2 245653330 245653826 -7602757 - MER1A DNA MER1_type -4 523 1 751 224 133 26 chr2 245653826 245653958 -7602625 - MLT1C LTR MaLR -116 351 176 1952 258 36 13 chr2 245654005 245654622 -7601961 - L1M4 LINE L1 -1823 4323 3693 414 218 35 0 chr2 245654632 245654719 -7601864 + Tigger2 DNA MER2_type 2619 2708 -10 1962 219 86 61 chr2 245654720 245655553 -7601030 - Charlie2 DNA MER1_type -150 2712 1859 622 125 0 0 chr2 245655610 245655698 -7600885 + MLT1B LTR MaLR 88 175 -215 329 316 78 24 chr2 245655700 245655906 -7600677 - Charlie2 DNA MER1_type -2560 222 6 1597 133 139 27 chr2 245655924 245656261 -7600322 + THE1C LTR MaLR 1 375 0 510 284 92 66 chr2 245656305 245656608 -7599975 + HAL1 LINE L1 10 320 -2187 194 0 39 0 chr2 245656683 245656709 -7599874 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 850 212 0 0 chr2 245656709 245656855 -7599728 - FRAM SINE Alu -30 146 1 207 0 0 0 chr2 245657623 245657646 -7598937 + (CA)n Simple_repeat Simple_repeat 1 23 0 2114 101 3 0 chr2 245658453 245658749 -7597834 + AluSg SINE Alu 1 297 -13 1695 152 31 0 chr2 245659000 245659290 -7597293 - AluSx SINE Alu -9 303 5 356 253 159 34 chr2 245659722 245659957 -7596626 - MER34 LTR ERV1 -195 512 308 1872 134 0 17 chr2 245659957 245660256 -7596327 - AluJo SINE Alu -18 294 1 356 253 159 34 chr2 245660256 245660330 -7596253 - MER34 LTR ERV1 -399 308 1 180 0 0 0 chr2 245660666 245660686 -7595897 + (A)n Simple_repeat Simple_repeat 1 20 0 2056 132 0 7 chr2 245660746 245661056 -7595527 + AluSx SINE Alu 1 308 -4 1000 169 0 0 chr2 245661933 245662093 -7594490 - FRAM SINE Alu -16 160 1 526 122 102 31 chr2 245662122 245662220 -7594363 + MER53 DNA DNA 1 105 -84 748 191 153 24 chr2 245662460 245662767 -7593816 - LTR54B LTR ERV1 -53 445 75 579 263 101 14 chr2 245663260 245663469 -7593114 + MIR SINE MIR 32 258 -4 207 194 0 0 chr2 245663689 245663725 -7592858 + (CA)n Simple_repeat Simple_repeat 1 36 0 1663 211 31 6 chr2 245665194 245665550 -7591033 - MLT1A1 LTR MaLR 0 365 1 421 75 194 0 chr2 245665989 245666056 -7590527 - MADE1 DNA Mariner 0 80 1 1979 117 7 7 chr2 245666078 245666377 -7590206 - AluSx SINE Alu -13 299 1 218 316 119 54 chr2 245669572 245669642 -7586941 + MIR3 SINE MIR 5 69 -139 826 199 5 78 chr2 245669642 245669833 -7586750 - MER45A DNA AcHobo 0 178 2 218 316 119 54 chr2 245669833 245669930 -7586653 + MIR3 SINE MIR 69 183 -25 218 368 11 0 chr2 245670486 245670581 -7586002 + L2 LINE L2 2944 3039 -233 267 303 77 39 chr2 245672205 245672360 -7584223 - L2 LINE L2 -782 2532 2372 282 233 35 0 chr2 245672592 245672678 -7583905 + CT-rich Low_complexity Low_complexity 1 89 0 1858 141 28 0 chr2 245672975 245673259 -7583324 + AluSx SINE Alu 1 292 -20 192 152 0 0 chr2 245673439 245673472 -7583111 + (CA)n Simple_repeat Simple_repeat 2 34 0 337 45 0 0 chr2 245673541 245673585 -7582998 + AluY SINE Alu 253 296 -4 694 218 140 6 chr2 245675556 245675735 -7580848 - MER20 DNA MER1_type -16 203 1 1566 113 4 13 chr2 245675874 245676112 -7580471 - AluY SINE Alu -13 298 63 214 333 68 27 chr2 245676114 245676261 -7580322 + L2 LINE L2 2715 2867 -447 1941 133 3 38 chr2 245676416 245676733 -7579850 - AluSx SINE Alu -5 307 2 763 176 24 0 chr2 245676850 245676975 -7579608 + FLAM_A SINE Alu 1 128 -5 27 49 0 0 chr2 245677314 245677355 -7579228 + AT_rich Low_complexity Low_complexity 1 41 0 3060 211 23 6 chr2 245677771 245678433 -7578150 + L1MC4 LINE L1 6701 7373 -669 430 53 53 79 chr2 245678487 245678563 -7578020 + L1MC4 LINE L1 7969 8042 0 2044 108 0 7 chr2 245679177 245679493 -7577090 + AluY SINE Alu 1 314 0 2629 135 33 19 chr2 245679693 245680115 -7576468 - MSTC LTR MaLR 0 428 1 233 284 61 76 chr2 245680307 245680504 -7576079 + HAL1b LINE L1 336 529 -819 1789 216 78 37 chr2 245682062 245682547 -7574036 + MLT1D LTR MaLR 1 505 0 279 247 39 13 chr2 245682558 245682635 -7573948 - LTR67 LTR ERVL -6 551 473 1583 95 13 17 chr2 245683833 245684065 -7572518 - AluSq SINE Alu -4 309 79 4279 179 33 7 chr2 245684338 245685193 -7571390 + L1MB7 LINE L1 5288 6164 -20 2318 103 0 0 chr2 245685212 245685524 -7571059 + AluSx SINE Alu 1 312 0 209 194 0 0 chr2 245685767 245685803 -7570780 + A-rich Low_complexity Low_complexity 1 36 0 1570 225 59 45 chr2 245686639 245687073 -7569510 - MLT1C LTR MaLR -4 463 6 418 143 39 0 chr2 245687821 245687898 -7568685 + Alu SINE Alu 226 305 -5 869 161 17 46 chr2 245687898 245688072 -7568511 + MLT2D LTR ERVL 198 366 -48 297 132 75 0 chr2 245688116 245688169 -7568414 + MLT2D LTR ERVL 464 520 0 1906 183 42 5 chr2 245688207 245688316 -7568267 + L1MC3 LINE L1 7359 7463 -322 1781 132 37 0 chr2 245688316 245688619 -7567964 + AluSx SINE Alu 1 313 0 1906 183 42 5 chr2 245688619 245688917 -7567666 + L1MC3 LINE L1 7463 7782 -3 2871 88 0 3 chr2 245689407 245689772 -7566811 - THE1B LTR MaLR 0 364 1 312 227 121 8 chr2 245689791 245689923 -7566660 - L1ME4a LINE L1 -7 6114 5968 1873 134 3 3 chr2 245689966 245690257 -7566326 + AluSq SINE Alu 3 293 -20 396 40 0 0 chr2 245691349 245691399 -7565184 + (TG)n Simple_repeat Simple_repeat 2 51 0 1020 304 153 30 chr2 245691646 245692744 -7563839 + L2 LINE L2 1942 3181 -132 742 133 77 21 chr2 245693447 245693590 -7562993 + MLT1D LTR MaLR 355 505 0 298 373 127 0 chr2 245693867 245693993 -7562590 + L2 LINE L2 3127 3268 -4 1894 75 68 14 chr2 245694484 245694765 -7561818 - AluSq SINE Alu -13 300 5 226 312 55 18 chr2 245696207 245696316 -7560267 - MER5A DNA MER1_type -28 161 49 2141 105 0 0 chr2 245696878 245697173 -7559410 - AluSg SINE Alu -13 297 3 184 300 78 0 chr2 245697947 245698037 -7558546 - MIR SINE MIR -122 140 44 186 342 78 45 chr2 245698359 245698602 -7557981 + L2 LINE L2 2844 3094 -178 182 242 61 15 chr2 245700248 245700314 -7556269 - MER5A DNA MER1_type -99 90 22 2367 90 3 0 chr2 245701109 245701410 -7555173 - AluSx SINE Alu -10 302 1 373 242 154 27 chr2 245702491 245702640 -7553943 + MIR SINE MIR 88 255 -7 2244 119 3 0 chr2 245702861 245703163 -7553420 + AluSx SINE Alu 1 303 -9 473 111 56 0 chr2 245703387 245703459 -7553124 - MER39B LTR ERV1 0 653 578 636 188 0 0 chr2 245703460 245703561 -7553022 + AluS SINE Alu 2 102 -211 2039 137 3 3 chr2 245703665 245703949 -7552634 - AluSx SINE Alu -26 286 3 280 325 13 0 chr2 245704061 245704221 -7552362 - L1ME LINE L1 -672 5479 5316 385 291 0 18 chr2 245704221 245704331 -7552252 + (TATG)n Simple_repeat Simple_repeat 3 110 0 5862 128 95 27 chr2 245704333 245704608 -7551975 - Tigger3b DNA MER2_type -1797 1231 976 2265 101 24 0 chr2 245704608 245704904 -7551679 + AluSc SINE Alu 1 303 -6 5862 128 95 27 chr2 245704904 245705075 -7551508 - Tigger3b DNA MER2_type -2052 976 818 2239 112 0 43 chr2 245705075 245705398 -7551185 + AluSx SINE Alu 1 309 -3 5862 128 95 27 chr2 245705398 245705822 -7550761 - Tigger3b DNA MER2_type -2210 818 424 759 52 0 0 chr2 245705822 245705918 -7550665 + (TA)n Simple_repeat Simple_repeat 2 97 0 189 0 0 0 chr2 245705917 245705938 -7550645 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 5862 128 95 27 chr2 245705918 245706192 -7550391 - Tigger3b DNA MER2_type -2604 424 28 402 306 42 7 chr2 245706203 245706347 -7550236 - L1ME LINE L1 -849 5297 5149 317 284 31 131 chr2 245706365 245706685 -7549898 - L1ME3A LINE L1 -11 6159 5872 343 259 63 7 chr2 245706686 245706829 -7549754 + L1M4 LINE L1 4616 4766 -1380 526 272 65 40 chr2 245706834 245707034 -7549549 - L1ME3A LINE L1 -355 5807 5603 327 336 19 0 chr2 245707105 245707212 -7549371 - L1ME LINE L1 -1197 4949 4841 412 288 81 45 chr2 245707483 245707681 -7548902 - MIR SINE MIR -24 238 34 2371 94 13 0 chr2 245708604 245708902 -7547681 + AluSq SINE Alu 1 302 -11 268 59 0 0 chr2 245709063 245709097 -7547486 - AluSp/q SINE Alu -32 271 238 263 213 188 12 chr2 245709217 245709297 -7547286 - MIR SINE MIR -70 192 99 584 294 33 38 chr2 245709472 245709683 -7546900 - MIR SINE MIR -51 211 2 205 296 0 12 chr2 245710170 245710251 -7546332 + GA-rich Low_complexity Low_complexity 2 81 0 998 17 0 0 chr2 245710359 245710475 -7546108 + L1PA2 LINE L1 6040 6155 0 373 35 52 0 chr2 245710633 245710691 -7545892 + (TTTC)n Simple_repeat Simple_repeat 4 64 0 1957 96 121 4 chr2 245710696 245710976 -7545607 - AluSq SINE Alu 0 313 1 218 175 0 48 chr2 245712581 245712670 -7543913 + (CGCGG)n Simple_repeat Simple_repeat 1 84 0 243 65 0 81 chr2 245712692 245712754 -7543829 + (CGGGG)n Simple_repeat Simple_repeat 2 58 0 40 73 0 0 chr2 245713126 245713208 -7543375 + GC_rich Low_complexity Low_complexity 1 82 0 333 47 0 0 chr2 245713895 245713938 -7542645 + (TGGA)n Simple_repeat Simple_repeat 4 46 0 186 71 0 0 chr2 245714691 245714719 -7541864 + (A)n Simple_repeat Simple_repeat 1 28 0 345 297 39 58 chr2 245716221 245716376 -7540207 - MER5A DNA MER1_type 0 189 38 2581 67 3 6 chr2 245716977 245717291 -7539292 + AluSp SINE Alu 1 313 0 2344 85 0 16 chr2 245717987 245718292 -7538291 + AluSc SINE Alu 1 300 -9 1453 146 41 0 chr2 245718987 245719206 -7537377 + AluJo SINE Alu 75 302 -10 314 315 0 22 chr2 245719888 245719977 -7536606 - MIR SINE MIR -158 104 18 1560 151 7 32 chr2 245721155 245721440 -7535143 + AluSx SINE Alu 1 278 -34 367 306 74 29 chr2 245721540 245721851 -7534732 + L1ME4a LINE L1 5595 5919 -202 2534 67 3 0 chr2 245722271 245722570 -7534013 + AluSp SINE Alu 1 300 -13 3665 121 43 0 chr2 245722649 245723178 -7533405 + MER41A LTR ERV1 1 552 -2 417 283 94 28 chr2 245723307 245723519 -7533064 + L2 LINE L2 3083 3308 -5 2603 40 7 10 chr2 245723529 245723829 -7532754 + AluY SINE Alu 1 299 -12 472 284 85 20 chr2 245725011 245725212 -7531371 + L2 LINE L2 3086 3299 -14 2223 106 0 0 chr2 245727082 245727365 -7529218 + AluSq SINE Alu 1 283 -30 207 0 0 0 chr2 245727625 245727648 -7528935 + (TA)n Simple_repeat Simple_repeat 2 24 0 345 314 69 19 chr2 245727656 245727815 -7528768 + L1M4 LINE L1 5176 5342 -804 278 182 18 0 chr2 245728715 245728770 -7527813 + MER94 DNA DNA 2 57 -77 1654 55 5 5 chr2 245728773 245728973 -7527610 + AluY SINE Alu 104 303 -8 586 105 19 9 chr2 245729043 245729148 -7527435 + (TTCC)n Simple_repeat Simple_repeat 4 109 0 1791 171 13 7 chr2 245729149 245729447 -7527136 - AluJo SINE Alu -12 300 1 1532 188 10 10 chr2 245729447 245729750 -7526833 - MLT1A1 LTR MaLR -62 303 1 2391 89 0 10 chr2 245729766 245730079 -7526504 - AluSx SINE Alu 0 312 3 690 268 49 27 chr2 245732077 245732301 -7524282 + MIR SINE MIR 34 262 0 425 257 106 0 chr2 245732580 245732693 -7523890 + L2 LINE L2 3148 3272 0 476 285 71 7 chr2 245734307 245734517 -7522066 - MIR SINE MIR -9 253 23 2174 129 0 3 chr2 245734585 245734888 -7521695 + AluSx SINE Alu 1 302 -10 238 319 0 80 chr2 245735218 245735356 -7521227 + MIR SINE MIR 84 210 -52 198 274 0 20 chr2 245736007 245736058 -7520525 - L2 LINE L2 -84 3229 3180 734 277 102 70 chr2 245736987 245737486 -7519097 + MLT1L LTR MaLR 7 521 -94 286 343 29 0 chr2 245737816 245737918 -7518665 - MIR SINE MIR -2 260 156 243 88 0 0 chr2 245737951 245737985 -7518598 + (CAGA)n Simple_repeat Simple_repeat 3 36 0 537 329 27 31 chr2 245738003 245738225 -7518358 - MIR SINE MIR -18 244 24 356 213 12 0 chr2 245738436 245738516 -7518067 - MER5A DNA MER1_type -83 106 26 1019 196 48 0 chr2 245738627 245738836 -7517747 + MER20 DNA MER1_type 1 219 0 986 280 31 49 chr2 245738841 245739095 -7517488 + L2 LINE L2 2932 3178 -135 1851 185 62 90 chr2 245739095 245739615 -7516968 - MLT1D LTR MaLR 0 505 1 986 280 31 49 chr2 245739615 245739749 -7516834 + L2 LINE L2 3178 3313 0 2017 182 81 9 chr2 245740193 245740628 -7515955 - MLT1C LTR MaLR 0 467 2 679 198 24 8 chr2 245740959 245741085 -7515498 + FLAM_A SINE Alu 1 128 -5 27 49 0 0 chr2 245741424 245741465 -7515118 + AT_rich Low_complexity Low_complexity 1 41 0 301 354 35 0 chr2 245741589 245741733 -7514850 - L1ME4a LINE L1 -189 5932 5784 666 328 96 52 chr2 245741806 245742437 -7514146 - L1MEc LINE L1 -3242 2973 2328 2051 127 10 13 chr2 245742437 245742737 -7513846 + AluSx SINE Alu 1 299 -13 666 328 96 52 chr2 245742737 245743042 -7513541 - L1MEc LINE L1 -3887 2328 2038 189 147 0 0 chr2 245744042 245744076 -7512507 + (A)n Simple_repeat Simple_repeat 1 34 0 2133 125 0 16 chr2 245745319 245745623 -7510960 - AluSq SINE Alu -14 299 1 258 219 0 0 chr2 245747850 245747914 -7508669 + GA-rich Low_complexity Low_complexity 1 64 0 1929 109 0 4 chr2 245747946 245748222 -7508361 + AluSq SINE Alu 39 313 0 5272 154 16 16 chr2 245748329 245749282 -7507301 - L1P LINE L1 -1325 4821 3869 1500 89 0 61 chr2 245749311 245749557 -7507026 + AluSq SINE Alu 53 283 -30 22 0 0 0 chr2 245749581 245749603 -7506980 + AT_rich Low_complexity Low_complexity 1 22 0 416 296 31 31 chr2 245749799 245749958 -7506625 + MIR SINE MIR 30 188 -74 202 205 0 0 chr2 245750484 245750523 -7506060 + T-rich Low_complexity Low_complexity 5 43 0 201 269 0 0 chr2 245750702 245750769 -7505814 + (TA)n Simple_repeat Simple_repeat 1 67 0 1635 172 0 41 chr2 245750934 245751248 -7505335 - AluJo SINE Alu -11 301 1 385 262 110 72 chr2 245751671 245751707 -7504876 + MIR SINE MIR 2 35 -227 2141 126 0 0 chr2 245751707 245752017 -7504566 + AluSx SINE Alu 1 310 -2 385 262 110 72 chr2 245752017 245752217 -7504366 + MIR SINE MIR 35 247 -15 3794 105 0 4 chr2 245753039 245753552 -7503031 + MER9 LTR ERVK 1 511 0 248 162 0 0 chr2 245754131 245754168 -7502415 - LTR16B LTR ERVL -2 462 426 1153 193 127 49 chr2 245754181 245754498 -7502085 - MLT1C LTR MaLR 0 467 119 1930 88 57 40 chr2 245754498 245754794 -7501789 - AluSq SINE Alu -12 301 1 1153 193 127 49 chr2 245754794 245754823 -7501760 - MLT1C LTR MaLR -348 119 94 2062 139 58 29 chr2 245754860 245755204 -7501379 - THE1B LTR MaLR -8 356 3 523 76 54 65 chr2 245755207 245755257 -7501326 - MLT1C LTR MaLR -376 91 41 1352 216 109 61 chr2 245755257 245755752 -7500831 - MLT2B1 LTR ERVL 0 520 2 523 76 54 65 chr2 245755752 245755793 -7500790 - MLT1C LTR MaLR -426 41 1 501 283 57 38 chr2 245755793 245756106 -7500477 - LTR16B LTR ERVL -47 417 99 661 266 24 68 chr2 245756320 245756410 -7500173 + MIR SINE MIR 20 112 -150 2176 108 0 0 chr2 245756410 245756707 -7499876 - AluSx SINE Alu -15 297 1 661 266 24 68 chr2 245756707 245756864 -7499719 + MIR SINE MIR 112 256 -6 1978 108 3 0 chr2 245757791 245758079 -7498504 + L1PA8 LINE L1 4767 5055 -1091 1337 116 65 20 chr2 245758323 245758537 -7498046 + L1PA8 LINE L1 5032 5264 -882 6880 52 28 1 chr2 245758537 245759422 -7497161 + L1PA8 LINE L1 5254 6162 -10 1337 116 65 20 chr2 245759422 245759463 -7497120 + L1PA8 LINE L1 5264 5302 -844 1721 181 138 6 chr2 245759755 245760104 -7496479 + MSTD LTR MaLR 1 395 -1 385 242 13 0 chr2 245760153 245760302 -7496281 + (TG)n Simple_repeat Simple_repeat 2 152 0 399 222 76 42 chr2 245760320 245760464 -7496119 + L1ME4a LINE L1 5966 6114 -7 446 299 104 50 chr2 245760583 245761007 -7495576 + L1ME4a LINE L1 5406 5852 -269 1773 198 92 58 chr2 245761281 245761346 -7495237 - MLT1D LTR MaLR 0 654 593 1390 194 48 7 chr2 245761346 245761467 -7495116 + AluJo SINE Alu 2 117 -185 2011 139 0 0 chr2 245761467 245761770 -7494813 + AluSx SINE Alu 1 303 -9 1390 194 48 7 chr2 245761770 245761921 -7494662 + AluJo SINE Alu 117 285 -17 1773 198 92 58 chr2 245761921 245762408 -7494175 - MLT1D LTR MaLR -61 593 1 1019 171 45 0 chr2 245762529 245762705 -7493878 - MSTD LTR MaLR 0 396 213 265 263 40 72 chr2 245762809 245762961 -7493622 + L1ME4a LINE L1 5975 6121 0 1538 201 54 41 chr2 245763902 245764271 -7492312 + MLT1A2 LTR MaLR 1 374 0 248 298 114 9 chr2 245766480 245766594 -7489989 - L3 LINE CR1 -3 1574 1449 2115 116 0 3 chr2 245767153 245767454 -7489129 - AluSq SINE Alu -13 300 1 686 259 5 49 chr2 245768418 245768538 -7488045 - MER45A DNA AcHobo -1404 177 66 1581 218 18 75 chr2 245768538 245768785 -7487798 - MLT1C LTR MaLR 0 467 260 1854 119 0 4 chr2 245768785 245769054 -7487529 - AluSq SINE Alu -45 268 1 1581 218 18 75 chr2 245769054 245769301 -7487282 - MLT1C LTR MaLR -207 260 1 686 259 5 49 chr2 245769301 245769365 -7487218 - MER45A DNA AcHobo -1515 66 1 742 188 0 8 chr2 245769848 245769981 -7486602 - MLT1D LTR MaLR -17 488 357 1586 207 149 27 chr2 245770405 245770445 -7486138 + MLT1D LTR MaLR 1 35 -470 2415 149 49 10 chr2 245770445 245770855 -7485728 - MSTB LTR MaLR 0 426 1 1586 207 149 27 chr2 245770855 245771264 -7485319 + MLT1D LTR MaLR 35 505 0 210 209 75 0 chr2 245771451 245771518 -7485065 + MIR SINE MIR 93 164 -98 2295 61 0 7 chr2 245772499 245772792 -7483791 - AluY SINE Alu -20 291 1 2071 112 3 3 chr2 245773362 245773657 -7482926 + AluSx SINE Alu 1 295 -17 944 214 134 35 chr2 245773784 245774097 -7482486 - MER2 DNA MER2_type 0 344 1 1062 213 83 71 chr2 245774232 245774651 -7481932 + MLT1C LTR MaLR 18 451 -16 1374 216 10 30 chr2 245774897 245775202 -7481381 + AluJb SINE Alu 1 299 -3 304 330 54 25 chr2 245775385 245775552 -7481031 - MLT1J2 LTR MaLR -17 426 264 2280 105 0 6 chr2 245775554 245775868 -7480715 - AluSx SINE Alu 0 312 1 491 264 142 0 chr2 245776530 245776678 -7479905 + MER5A DNA MER1_type 18 186 -3 183 300 83 0 chr2 245777330 245777390 -7479193 + L2 LINE L2 1193 1257 -2057 203 189 0 0 chr2 245777403 245777440 -7479143 + T-rich Low_complexity Low_complexity 1 37 0 324 214 107 39 chr2 245777641 245777819 -7478764 + MER33 DNA MER1_type 1 190 -134 2060 117 7 0 chr2 245778303 245778601 -7477982 - AluSx SINE Alu -12 300 1 222 35 0 0 chr2 245780967 245780980 -7475603 + (TG)n Simple_repeat Simple_repeat 2 14 -16 189 0 0 0 chr2 245780980 245781001 -7475582 + (GA)n Simple_repeat Simple_repeat 1 21 0 222 35 0 0 chr2 245781001 245781016 -7475567 + (TG)n Simple_repeat Simple_repeat 13 30 0 238 303 159 30 chr2 245781170 245781216 -7475367 + L2 LINE L2 3164 3203 -110 1838 118 61 10 chr2 245781216 245781512 -7475071 - AluSx SINE Alu -1 311 1 238 303 159 30 chr2 245781512 245781597 -7474986 + L2 LINE L2 3203 3312 -1 239 258 15 15 chr2 245782110 245782176 -7474407 - MIR3 SINE MIR -23 185 120 1949 147 0 7 chr2 245782286 245782593 -7473990 + AluSc SINE Alu 1 305 -4 446 317 219 24 chr2 245782939 245783396 -7473187 + L1MEd LINE L1 461 1006 -5524 2103 119 3 0 chr2 245783767 245784070 -7472513 - AluSx SINE Alu -8 304 1 1959 55 0 24 chr2 245784524 245784778 -7471805 - L1PA8 LINE L1 -5 6167 5920 1453 202 87 67 chr2 245784797 245785071 -7471512 + MLT1C LTR MaLR 8 296 -171 1204 197 93 113 chr2 245785071 245785674 -7470909 - LTR49 LTR ERV1 0 595 5 1453 202 87 67 chr2 245785674 245785850 -7470733 + MLT1C LTR MaLR 296 467 0 261 256 26 51 chr2 245785850 245785967 -7470616 + L1MEd LINE L1 1525 1638 -4892 468 206 188 19 chr2 245785971 245786131 -7470452 + MER53 DNA DNA 3 189 0 384 310 79 71 chr2 245786135 245786434 -7470149 + L1MEd LINE L1 1640 1846 -4694 2184 105 0 0 chr2 245786434 245786729 -7469854 + AluSx SINE Alu 1 295 -17 384 310 79 71 chr2 245786729 245786823 -7469760 + L1MEd LINE L1 1846 1938 -4602 1671 178 63 148 chr2 245786890 245787460 -7469123 + MLT1F1 LTR MaLR 41 567 0 314 319 151 28 chr2 245787505 245787790 -7468793 + L1MEd LINE L1 2198 2517 -4023 192 242 212 55 chr2 245787999 245788141 -7468442 + MIR SINE MIR 56 229 -33 1930 157 24 101 chr2 245788141 245788607 -7467976 + MSTB1 LTR MaLR 3 432 0 192 242 212 55 chr2 245788607 245788629 -7467954 + MIR SINE MIR 229 246 -16 1790 160 0 22 chr2 245788631 245788949 -7467634 + AluJo SINE Alu 1 311 -1 272 271 0 52 chr2 245789974 245790070 -7466513 + MIR SINE MIR 171 261 -1 25 0 0 0 chr2 245790239 245790264 -7466319 + AT_rich Low_complexity Low_complexity 1 25 0 242 331 47 83 chr2 245791520 245791774 -7464809 + L2 LINE L2 3016 3260 -12 1498 101 0 0 chr2 245791776 245791985 -7464598 - AluSg/x SINE Alu -1 309 101 593 86 0 0 chr2 245792068 245792149 -7464434 - AluSg1 SINE Alu -227 82 2 1393 257 86 35 chr2 245793093 245793572 -7463011 - MLT1D LTR MaLR 0 505 3 410 290 159 0 chr2 245793724 245793900 -7462683 - LTR16C LTR ERVL 0 491 288 594 222 0 46 chr2 245794118 245794296 -7462287 + MIR SINE MIR 95 262 0 281 313 78 58 chr2 245794409 245794896 -7461687 - L2 LINE L2 -41 3231 2742 359 220 28 28 chr2 245995015 245995124 -7261459 + AluSc SINE Alu 191 299 0 2278 114 0 0 chr2 245995480 245995779 -7260804 + AluY SINE Alu 1 299 -12 1873 169 3 7 chr2 245995804 245996094 -7260489 + AluJb SINE Alu 1 289 -23 374 262 120 44 chr2 245996266 245996449 -7260134 + L1M4 LINE L1 2151 2347 -3799 277 286 32 45 chr2 245996518 245996672 -7259911 + L2 LINE L2 2163 2314 -1000 378 243 27 9 chr2 245996687 245996798 -7259785 + MER81 DNA DNA 2 114 0 212 272 130 11 chr2 245996901 245996993 -7259590 + L2 LINE L2 3168 3270 -2 2331 98 7 0 chr2 245997937 245998234 -7258349 + AluSx SINE Alu 2 300 -12 496 234 48 36 chr2 246000139 246000306 -7256277 - MER5B DNA MER1_type -3 175 7 456 232 178 65 chr2 246000481 246000570 -7256013 - MER63A DNA MER1_type -1479 209 131 1963 128 27 14 chr2 246000570 246000866 -7255717 + AluSx SINE Alu 1 300 -12 456 232 178 65 chr2 246000866 246000961 -7255622 - MER63A DNA MER1_type -1557 131 4 1862 140 7 18 chr2 246001045 246001331 -7255252 + AluJo SINE Alu 16 298 -14 344 278 236 11 chr2 246001935 246002126 -7254457 + MIR SINE MIR 26 259 -3 1058 279 61 13 chr2 246005567 246005961 -7250622 + MLT1C LTR MaLR 53 465 -2 2623 58 0 7 chr2 246007479 246007789 -7248794 + AluY SINE Alu 1 308 -3 266 270 0 45 chr2 246009143 246009232 -7247351 - MER58A DNA MER1_type 0 113 29 1826 153 0 30 chr2 246009258 246009553 -7247030 + AluJo SINE Alu 3 288 -24 2601 141 107 14 chr2 246010399 246010883 -7245700 + MER72 LTR ERV1 194 722 0 424 72 29 0 chr2 246011123 246011192 -7245391 + (TTCA)n Simple_repeat Simple_repeat 4 74 0 1860 175 13 22 chr2 246011295 246011610 -7244973 - AluJo SINE Alu 0 312 1 204 257 136 36 chr2 246011675 246011815 -7244768 - L2 LINE L2 -260 3053 2900 2025 156 0 0 chr2 246017748 246018067 -7238516 - AluSx SINE Alu 0 312 1 237 65 0 0 chr2 246018506 246018537 -7238046 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 549 227 82 65 chr2 246019142 246019584 -7236999 + MER39 LTR ERV1 1 527 -38 599 26 13 0 chr2 246019603 246019680 -7236903 + (TA)n Simple_repeat Simple_repeat 2 79 0 335 224 30 59 chr2 246019795 246019926 -7236657 + L1MC4 LINE L1 1952 6983 -1339 183 80 0 0 chr2 246019927 246019952 -7236631 + (TG)n Simple_repeat Simple_repeat 2 26 0 472 222 111 0 chr2 246019975 246020092 -7236491 + L2 LINE L2 3182 3311 -2 2181 52 0 4 chr2 246021390 246021640 -7234943 - AluSg SINE Alu -61 249 1 632 264 46 14 chr2 246022417 246022633 -7233950 + MER58A DNA MER1_type 1 223 -1 1025 267 81 12 chr2 246024628 246024961 -7231622 + MLT1A2 LTR MaLR 1 356 -18 248 284 26 52 chr2 246027668 246027784 -7228799 - MIR SINE MIR -79 183 71 583 291 163 19 chr2 246028692 246029364 -7227219 + L2 LINE L2 2265 3030 -283 2075 124 0 0 chr2 246030554 246030992 -7225591 - AluSx SINE Alu 0 438 1 1864 214 133 95 chr2 246031390 246032035 -7224548 - MER21B LTR ERV1 -57 806 126 2245 124 0 0 chr2 246032035 246032333 -7224250 - AluSx SINE Alu -13 299 2 1864 214 133 95 chr2 246032333 246032464 -7224119 - MER21B LTR ERV1 -737 126 1 60 15 0 0 chr2 246032542 246032609 -7223974 + AT_rich Low_complexity Low_complexity 1 67 0 2178 107 3 0 chr2 246032628 246032917 -7223666 - AluSc SINE Alu -19 290 1 633 208 28 14 chr2 246034177 246034321 -7222262 + MER65A LTR ERV1 1 146 -299 302 286 65 55 chr2 246034477 246034676 -7221907 + MER65A LTR ERV1 245 445 0 460 283 80 40 chr2 246035352 246035578 -7221005 + MIR SINE MIR 17 251 -11 661 123 88 9 chr2 246036028 246036142 -7220441 - MLT1A1 LTR MaLR 0 365 243 1310 218 39 66 chr2 246036696 246036957 -7219626 - MLT1A1 LTR MaLR -13 352 102 2625 97 6 0 chr2 246036957 246037319 -7219264 + THE1B LTR MaLR 1 364 0 1310 218 39 66 chr2 246037319 246037419 -7219164 - MLT1A1 LTR MaLR -263 102 1 282 304 0 0 chr2 246037433 246037512 -7219071 + (TA)n Simple_repeat Simple_repeat 2 80 0 22 70 0 0 chr2 246037583 246037626 -7218957 + AT_rich Low_complexity Low_complexity 1 43 0 270 333 31 0 chr2 246037853 246038075 -7218508 - L1M4 LINE L1 -1300 4846 4618 245 118 66 40 chr2 246038075 246038151 -7218432 + (TTTA)n Simple_repeat Simple_repeat 2 79 0 7581 13 0 0 chr2 246038163 246039479 -7217104 - L1PA2 LINE L1 0 6155 4842 263 186 0 0 chr2 246040505 246040548 -7216035 + 5S rRNA rRNA 1 43 -78 209 310 14 0 chr2 246041334 246041405 -7215178 + CT-rich Low_complexity Low_complexity 3 74 0 202 229 66 0 chr2 246042814 246042875 -7213708 - MIR3 SINE MIR -27 181 117 433 256 188 34 chr2 246043652 246043918 -7212665 + L1ME4a LINE L1 5803 6109 -12 1865 131 3 3 chr2 246043957 246044239 -7212344 - AluSx SINE Alu -30 282 1 292 271 42 0 chr2 246044656 246044752 -7211831 - L1ME LINE L1 -393 5728 5629 1610 95 121 11 chr2 246044971 246045235 -7211348 - AluSg SINE Alu -17 293 1 1944 125 13 30 chr2 246045870 246046175 -7210408 - AluSx SINE Alu -12 300 1 755 261 31 10 chr2 246046368 246046563 -7210020 - MER58A DNA MER1_type 0 224 26 192 393 49 16 chr2 246046601 246046723 -7209860 + MIR SINE MIR 33 158 -104 1849 155 3 7 chr2 246046989 246047293 -7209290 - AluSx SINE Alu -9 303 1 207 0 0 0 chr2 246047611 246047634 -7208949 + (T)n Simple_repeat Simple_repeat 1 23 0 198 276 52 0 chr2 246047661 246047719 -7208864 + MIR3 SINE MIR 112 172 -36 2209 99 3 0 chr2 246047772 246048074 -7208509 + AluSq SINE Alu 1 303 -10 406 299 29 23 chr2 246048412 246048586 -7207997 + L2 LINE L2 2886 3060 -253 181 339 31 0 chr2 246048984 246049049 -7207534 - L2 LINE L2 0 3272 3206 354 311 79 75 chr2 246049967 246050040 -7206543 + L1ME4a LINE L1 5759 5830 -291 2011 93 4 0 chr2 246050040 246050310 -7206273 - AluSg1 SINE Alu -8 301 31 354 311 79 75 chr2 246050310 246050554 -7206029 + L1ME4a LINE L1 5830 6077 -44 231 189 0 0 chr2 246050642 246050695 -7205888 + (TGGA)n Simple_repeat Simple_repeat 2 54 0 2026 100 0 11 chr2 246050709 246050989 -7205594 + AluSc SINE Alu 11 287 -22 326 246 0 0 chr2 246051366 246051435 -7205148 - MER20 DNA MER1_type -125 94 26 184 277 77 0 chr2 246051992 246052057 -7204526 + MIR SINE MIR 64 133 -129 1293 216 109 24 chr2 246052617 246053030 -7203553 + MLT1C LTR MaLR 18 465 -2 4465 149 9 1 chr2 246053621 246054318 -7202265 + Tigger2 DNA MER2_type 43 744 -1974 1618 130 4 15 chr2 246054384 246054645 -7201938 + Tigger2 DNA MER2_type 2451 2708 -10 303 208 115 0 chr2 246054668 246054764 -7201819 - LTR37A LTR ERV1 -233 193 87 2170 120 0 0 chr2 246055122 246055430 -7201153 - AluSg SINE Alu -2 308 1 404 126 12 2 chr2 246056158 246056414 -7200169 + AluSx SINE Alu 1 306 -5 33 0 0 0 chr2 246056626 246056659 -7199924 + AT_rich Low_complexity Low_complexity 1 33 0 239 53 0 26 chr2 246058348 246058386 -7198197 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 1430 274 50 77 chr2 246058534 246059026 -7197557 + Zaphod DNA AcHobo 120 585 -3446 1838 143 7 0 chr2 246059026 246059320 -7197263 + AluSq SINE Alu 1 296 -17 1430 274 50 77 chr2 246059320 246059623 -7196960 + Zaphod DNA AcHobo 585 894 -3137 784 93 19 0 chr2 246059634 246059742 -7196841 - AluY SINE Alu -16 295 186 326 180 20 20 chr2 246059748 246059848 -7196735 + Zaphod DNA AcHobo 889 988 -3043 1035 218 76 39 chr2 246059855 246059933 -7196650 + Zaphod DNA AcHobo 3602 3676 -355 2093 108 0 7 chr2 246059933 246060229 -7196354 - AluSc SINE Alu -15 294 1 1035 218 76 39 chr2 246060229 246060531 -7196052 + Zaphod DNA AcHobo 3676 3996 -35 396 375 57 39 chr2 246060573 246061066 -7195517 - L1M4 LINE L1 -1017 5129 4628 204 226 32 11 chr2 246061743 246061836 -7194747 + CT-rich Low_complexity Low_complexity 4 98 0 737 129 28 28 chr2 246061848 246062026 -7194557 + CT-rich Low_complexity Low_complexity 1 178 0 1776 163 13 0 chr2 246062026 246062327 -7194256 - AluJo SINE Alu -7 305 1 249 288 50 0 chr2 246062734 246062814 -7193769 - MER45A DNA AcHobo -44 134 51 2333 89 0 0 chr2 246063083 246063385 -7193198 - AluSg SINE Alu -8 302 1 2569 26 0 7 chr2 246063594 246063896 -7192687 - AluY SINE Alu -11 300 1 2241 194 49 7 chr2 246064003 246064451 -7192132 - MLT1C LTR MaLR 0 467 1 1033 61 0 0 chr2 246064572 246064704 -7191879 + AluY SINE Alu 167 298 -13 189 121 0 0 chr2 246065194 246065227 -7191356 + (T)n Simple_repeat Simple_repeat 1 33 0 1591 135 11 21 chr2 246065409 246065527 -7191056 + AluSx SINE Alu 4 122 -184 207 0 0 0 chr2 246065527 246065550 -7191033 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1591 135 11 21 chr2 246065550 246065737 -7190846 + AluSx SINE Alu 122 306 0 210 71 0 0 chr2 246065747 246065775 -7190808 + (TG)n Simple_repeat Simple_repeat 1 28 0 258 95 0 0 chr2 246065961 246066003 -7190580 + (A)n Simple_repeat Simple_repeat 1 42 0 1941 131 0 10 chr2 246067736 246068041 -7188542 + AluSc SINE Alu 1 302 -7 377 248 95 0 chr2 246069277 246069382 -7187201 + LTR67 LTR ERVL 440 554 -3 305 192 240 55 chr2 246069387 246069533 -7187050 + MIR SINE MIR 1 173 -89 1867 155 51 61 chr2 246069575 246069749 -7186834 - MLT1B LTR MaLR 0 390 216 1639 155 7 24 chr2 246069749 246070045 -7186538 - AluJb SINE Alu -21 291 1 1867 155 51 61 chr2 246070045 246070264 -7186319 - MLT1B LTR MaLR -174 216 1 432 97 0 0 chr2 246071646 246071708 -7184875 + (TCTG)n Simple_repeat Simple_repeat 3 64 0 2082 123 3 13 chr2 246071807 246072123 -7184460 + AluSp SINE Alu 1 313 0 6514 84 16 3 chr2 246072229 246074112 -7182471 + L1PA14 LINE L1 4252 6161 0 31 26 0 0 chr2 246074235 246074273 -7182310 + AT_rich Low_complexity Low_complexity 1 38 0 2817 208 78 55 chr2 246074507 246074954 -7181629 - L1ME2 LINE L1 -19 6145 5710 1890 120 0 4 chr2 246074954 246075249 -7181334 + AluSx SINE Alu 11 304 0 2817 208 78 55 chr2 246075249 246075825 -7180758 - L1ME2 LINE L1 -454 5710 5102 2197 231 63 121 chr2 246075837 246076458 -7180125 - L1 LINE L1 -1170 4976 4321 967 179 0 0 chr2 246076458 246076626 -7179957 + AluJb SINE Alu 135 302 -10 2197 231 63 121 chr2 246076626 246077419 -7179164 - L1 LINE L1 -1825 4321 3544 2080 161 30 25 chr2 246077419 246077780 -7178803 + THE1B LTR MaLR 1 363 -1 2197 231 63 121 chr2 246077780 246077803 -7178780 - L1 LINE L1 -2602 3544 3521 1242 156 24 0 chr2 246078493 246078704 -7177879 + AluJo SINE Alu 76 291 -21 180 176 0 0 chr2 246078737 246078771 -7177812 + (TG)n Simple_repeat Simple_repeat 1 34 0 2183 200 72 26 chr2 246078785 246079217 -7177366 - L1MA9 LINE L1 -54 6258 5847 1359 188 145 0 chr2 246079217 246079521 -7177062 - MER7A DNA MER2_type 0 346 1 2183 200 72 26 chr2 246079521 246079535 -7177048 - L1MA9 LINE L1 -465 5847 5835 1855 116 46 23 chr2 246079535 246079837 -7176746 + AluSg SINE Alu 1 309 -1 2183 200 72 26 chr2 246079837 246079999 -7176584 - L1MA9 LINE L1 -477 5835 5621 4978 82 20 16 chr2 246081284 246081990 -7174593 - L1PA11 LINE L1 -2 6172 5464 402 79 0 0 chr2 246082098 246082161 -7174422 + AluSc SINE Alu 244 306 -3 709 191 0 7 chr2 246082784 246082931 -7173652 - LTR37A LTR ERV1 0 426 281 1878 134 13 0 chr2 246082973 246083271 -7173312 + AluSx SINE Alu 1 302 -10 22 0 0 0 chr2 246083861 246083883 -7172700 + GC_rich Low_complexity Low_complexity 1 22 0 281 0 0 71 chr2 246084117 246084159 -7172424 + (CGGGGG)n Simple_repeat Simple_repeat 3 41 0 308 286 11 0 chr2 246084738 246084829 -7171754 + L2 LINE L2 3219 3310 -3 210 244 191 0 chr2 246084913 246085028 -7171555 - MIR SINE MIR -119 143 7 364 215 354 8 chr2 246085668 246085798 -7170785 + MIR SINE MIR 88 262 0 302 243 136 29 chr2 246085836 246085976 -7170607 + L1M LINE L1 5271 5425 -745 328 356 163 5 chr2 246086882 246087084 -7169499 + MIR SINE MIR 29 262 0 1994 171 139 0 chr2 246087855 246088229 -7168354 + MSTB LTR MaLR 1 426 0 587 286 117 45 chr2 246088288 246088715 -7167868 - L2 LINE L2 0 3272 2815 2004 130 3 23 chr2 246088972 246089273 -7167310 + AluSx SINE Alu 1 295 -17 398 214 0 0 chr2 246089429 246089499 -7167084 - L2 LINE L2 0 3313 3244 2462 85 3 0 chr2 246089715 246090020 -7166563 + AluSx SINE Alu 1 306 -6 243 0 0 0 chr2 246090461 246090488 -7166095 + (A)n Simple_repeat Simple_repeat 1 27 0 2029 112 0 4 chr2 246090496 246090773 -7165810 + AluSx SINE Alu 5 280 -32 282 29 0 0 chr2 246090775 246090810 -7165773 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 8895 158 21 28 chr2 246090885 246091080 -7165503 + L1MA7 LINE L1 3022 3217 -3074 2163 150 0 3 chr2 246091080 246091393 -7165190 + AluSx SINE Alu 1 312 0 8895 158 21 28 chr2 246091393 246094314 -7162269 + L1MA7 LINE L1 3217 6291 0 216 264 0 17 chr2 246094478 246094596 -7161987 + CT-rich Low_complexity Low_complexity 1 116 0 181 313 0 0 chr2 246096407 246096455 -7160128 - L2 LINE L2 -8 3305 3258 290 186 108 78 chr2 246096470 246096572 -7160011 - MIR SINE MIR -111 151 47 388 277 109 0 chr2 246096646 246096765 -7159818 + MIR3 SINE MIR 58 189 -19 253 274 156 37 chr2 246096780 246096915 -7159668 - L2 LINE L2 -5 3308 3158 395 274 31 87 chr2 246097470 246097675 -7158908 - HAL1 LINE L1 -1043 1464 1290 2346 109 0 3 chr2 246097675 246097978 -7158605 + AluSx SINE Alu 1 302 -10 395 274 31 87 chr2 246097978 246098162 -7158421 - HAL1 LINE L1 -1217 1290 1097 416 316 6 12 chr2 246098196 246098364 -7158219 - L1MC4a LINE L1 -1876 5932 5766 751 339 109 11 chr2 246098625 246099100 -7157483 - L2 LINE L2 -580 2734 2213 668 279 100 73 chr2 246099135 246099586 -7156997 + L2 LINE L2 2851 3313 0 188 380 118 16 chr2 246099594 246099884 -7156699 - L2 LINE L2 -1217 2097 1761 1030 194 29 19 chr2 246099884 246100090 -7156493 + L1PB3 LINE L1 5946 6153 -1 188 380 118 16 chr2 246100090 246100162 -7156421 - L2 LINE L2 -1553 1761 1698 2128 118 0 20 chr2 246100694 246100999 -7155584 + AluSc SINE Alu 1 299 -10 2419 103 0 0 chr2 246101375 246101687 -7154896 + AluSx SINE Alu 1 312 0 35783 33 30 2 chr2 246101857 246106372 -7150211 - L1P LINE L1 -1504 4642 1 311 300 132 55 chr2 246106447 246106667 -7149916 - L1 LINE L1 -1543 4603 4367 2252 108 3 0 chr2 246107950 246108245 -7148338 + AluSq SINE Alu 1 296 -17 711 264 55 74 chr2 246109725 246110007 -7146576 - MLT1C LTR MaLR -9 458 187 2189 136 0 3 chr2 246110007 246110316 -7146267 + AluSq SINE Alu 1 308 -5 711 264 55 74 chr2 246110316 246110492 -7146091 - MLT1C LTR MaLR -280 187 9 2381 110 0 0 chr2 246110716 246111024 -7145559 - AluSx SINE Alu -3 309 2 2360 90 0 17 chr2 246111038 246111339 -7145244 - AluSq SINE Alu -9 304 9 453 278 0 0 chr2 246111595 246111702 -7144881 + MER45B DNA AcHobo 386 492 -548 529 126 21 11 chr2 246111702 246111797 -7144786 + MER4A LTR ERV1 3 98 -566 609 153 141 3 chr2 246111797 246111974 -7144609 + MER4A LTR ERV1 261 520 -144 812 144 0 15 chr2 246112176 246112308 -7144275 + MER4A LTR ERV1 533 662 -2 2478 195 19 22 chr2 246112311 246112849 -7143734 + MER45B DNA AcHobo 488 1023 -17 218 164 18 0 chr2 246114291 246114346 -7142237 + (TA)n Simple_repeat Simple_repeat 2 57 0 428 298 105 6 chr2 246114482 246114663 -7141920 + MIR SINE MIR 64 262 0 1019 134 140 187 chr2 246115285 246115693 -7140890 + MSTA LTR MaLR 1 389 -39 1766 113 0 0 chr2 246115693 246115951 -7140632 - AluSg SINE Alu 0 311 54 1019 134 140 187 chr2 246115951 246115990 -7140593 + MSTA LTR MaLR 389 428 0 2103 146 3 0 chr2 246116421 246116716 -7139867 + AluSx SINE Alu 1 296 -16 336 260 42 62 chr2 246116802 246116994 -7139589 + L1MC4a LINE L1 5732 5919 -1889 1810 173 49 22 chr2 246117170 246117535 -7139048 + THE1C LTR MaLR 1 375 0 2474 103 14 35 chr2 246117781 246118151 -7138432 - THE1B LTR MaLR -2 362 1 300 324 64 29 chr2 246118334 246118507 -7138076 + L1M3c LINE L1 1300 1478 -4663 229 219 61 24 chr2 246118805 246118887 -7137696 + HAL1b LINE L1 402 486 -862 1690 138 7 45 chr2 246118919 246119036 -7137547 + AluSx SINE Alu 26 146 -211 2466 71 3 7 chr2 246119036 246119346 -7137237 + AluY SINE Alu 1 309 -2 1690 138 7 45 chr2 246119346 246119571 -7137012 + AluSx SINE Alu 146 357 0 322 285 99 7 chr2 246119572 246119723 -7136860 + L1MDa LINE L1 1229 1393 -5147 1036 266 49 0 chr2 246120501 246120768 -7135815 - AluJo SINE Alu -32 280 1 2232 124 48 20 chr2 246121249 246121603 -7134980 + THE1B LTR MaLR 1 364 0 582 176 225 6 chr2 246122165 246122347 -7134236 + MIR SINE MIR 35 256 -6 251 357 79 21 chr2 246124685 246124825 -7131758 + L2 LINE L2 3100 3247 -25 1090 209 60 32 chr2 246125170 246125485 -7131098 + MLT1C LTR MaLR 1 324 -143 474 258 65 0 chr2 246125969 246126124 -7130459 + MLT1C LTR MaLR 301 465 -2 747 313 0 5 chr2 246126131 246126326 -7130257 - MIR SINE MIR -9 253 60 701 193 31 72 chr2 246129128 246129351 -7127232 - MER20 DNA MER1_type -5 214 1 233 286 48 0 chr2 246131135 246131198 -7125385 - MER5A DNA MER1_type -38 151 86 216 0 0 0 chr2 246131467 246131491 -7125092 + (CAGA)n Simple_repeat Simple_repeat 3 26 0 2207 166 47 30 chr2 246131865 246132336 -7124247 + L1MB5 LINE L1 5688 6166 -8 252 222 89 126 chr2 246133038 246133173 -7123410 - MIR SINE MIR -110 152 23 332 173 70 76 chr2 246133900 246133957 -7122626 + MIR SINE MIR 27 83 -145 1845 157 27 3 chr2 246133957 246134257 -7122326 - AluJb SINE Alu -5 307 1 332 173 70 76 chr2 246134257 246134341 -7122242 + MIR SINE MIR 83 166 -62 2307 110 0 3 chr2 246134546 246134856 -7121727 + AluSx SINE Alu 1 309 -3 193 307 140 66 chr2 246135200 246135428 -7121155 - L3 LINE CR1 -748 829 585 214 315 45 0 chr2 246135919 246136008 -7120575 + MIR3 SINE MIR 84 176 -32 189 308 0 0 chr2 246136414 246136466 -7120117 - MIR SINE MIR -72 136 85 204 188 0 0 chr2 246136483 246136515 -7120068 + polypurine Low_complexity Low_complexity 2 33 0 531 288 84 0 chr2 246137948 246138139 -7118444 + L1MB5 LINE L1 5959 6165 -9 2497 78 0 3 chr2 246138560 246138866 -7117717 - AluY SINE Alu -6 305 1 248 310 41 75 chr2 246141588 246141856 -7114727 + LTR16A LTR ERVL 71 329 -121 1467 186 105 26 chr2 246145572 246146002 -7110581 + MLT1C LTR MaLR 1 464 -3 1751 165 81 0 chr2 246146496 246146830 -7109753 - MER46B DNA MER2_type 0 236 1 1105 229 81 7 chr2 246146851 246147161 -7109422 + MER58B DNA MER1_type 9 341 0 2327 99 0 0 chr2 246148347 246148641 -7107942 + AluY SINE Alu 1 294 -17 262 253 111 10 chr2 246149181 246149280 -7107303 + MIR SINE MIR 37 145 -117 869 182 18 6 chr2 246149458 246149628 -7106955 - MER5A DNA MER1_type 0 189 18 1569 120 131 0 chr2 246149634 246149901 -7106682 + AluSp SINE Alu 1 302 -1 325 238 71 63 chr2 246149964 246150090 -7106493 - MIR SINE MIR -87 175 49 187 246 116 0 chr2 246150409 246150478 -7106105 + MIR SINE MIR 49 125 -137 392 296 62 58 chr2 246151685 246151945 -7104638 + LTR16C LTR ERVL 231 491 0 1750 184 7 23 chr2 246152200 246152509 -7104074 + AluJo SINE Alu 5 308 -4 1691 209 71 33 chr2 246152710 246153189 -7103394 - MLT1D LTR MaLR -8 497 1 316 234 227 21 chr2 246153253 246153394 -7103189 + L2 LINE L2 3144 3313 0 677 129 221 14 chr2 246155673 246155813 -7100770 + AluSg/x SINE Alu 130 298 -11 555 272 42 45 chr2 246156065 246156217 -7100366 + L1ME3A LINE L1 5623 5774 -396 1734 156 46 9 chr2 246156217 246156543 -7100040 + MER44D DNA MER2_type 1 608 -1 555 272 42 45 chr2 246156543 246156656 -7099927 + L1ME3A LINE L1 5774 5903 -267 1199 269 85 57 chr2 246156656 246157233 -7099350 - MLT1E LTR MaLR 0 593 1 555 272 42 45 chr2 246157233 246157297 -7099286 + L1ME3A LINE L1 5903 5966 -204 270 56 0 0 chr2 246158366 246158402 -7098181 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 2355 88 3 3 chr2 246158452 246158759 -7097824 + AluSq SINE Alu 7 313 0 204 254 0 0 chr2 246158866 246158925 -7097658 + (TG)n Simple_repeat Simple_repeat 2 60 0 1768 236 85 16 chr2 246159564 246160068 -7096515 - L1MC3 LINE L1 0 7785 7247 1746 216 0 0 chr2 246160802 246161108 -7095475 - AluJb SINE Alu -6 306 1 183 275 0 0 chr2 246161151 246161191 -7095392 + MIR SINE MIR 106 145 -117 213 327 0 0 chr2 246161374 246161429 -7095154 + MIR SINE MIR 116 170 -92 2315 104 7 0 chr2 246162525 246162832 -7093751 - AluSx SINE Alu -3 309 1 1578 160 64 11 chr2 246162981 246163262 -7093321 + AluJo SINE Alu 1 296 -16 1658 136 16 8 chr2 246164176 246164433 -7092150 - AluJb SINE Alu -13 299 41 2096 105 3 7 chr2 246164511 246164796 -7091787 + AluSx SINE Alu 29 312 0 2507 82 3 0 chr2 246164801 246165107 -7091476 + AluSc SINE Alu 1 307 -2 3765 178 63 1 chr2 246165156 246165888 -7090695 + L1MB2 LINE L1 5388 6164 -7 374 287 84 21 chr2 246166459 246166602 -7089981 + MER5B DNA MER1_type 7 158 -20 485 193 0 11 chr2 246166776 246166957 -7089626 + (TG)n Simple_repeat Simple_repeat 1 179 0 192 200 0 0 chr2 246166968 246167023 -7089560 + (TG)n Simple_repeat Simple_repeat 1 55 0 187 143 0 48 chr2 246167923 246167965 -7088618 - L2 LINE L2 -1303 2011 1972 359 261 182 12 chr2 246169724 246169889 -7086694 + MIR SINE MIR 41 233 -29 286 282 154 0 chr2 246170346 246170502 -7086081 + MIR SINE MIR 75 254 -8 2131 112 34 0 chr2 246170523 246170817 -7085766 - AluSq SINE Alu -9 304 1 188 309 15 0 chr2 246172429 246172497 -7084086 + L2 LINE L2 3141 3209 -63 231 194 0 32 chr2 246173650 246173712 -7082871 + L1ME4a LINE L1 5677 5736 -385 1582 130 57 83 chr2 246173865 246174166 -7082417 + AluSq SINE Alu 2 294 -19 245 196 0 0 chr2 246174173 246174219 -7082364 - L2 LINE L2 -4 3309 3264 311 239 145 34 chr2 246174279 246174396 -7082187 + L1ME4a LINE L1 5968 6097 -24 22 0 0 0 chr2 246174443 246174465 -7082118 + AT_rich Low_complexity Low_complexity 1 22 0 2069 133 0 16 chr2 246174476 246174785 -7081798 + AluSx SINE Alu 1 304 -8 210 118 0 0 chr2 246175005 246175039 -7081544 + (CCCCCA)n Simple_repeat Simple_repeat 5 38 0 2326 117 0 0 chr2 246175342 246175650 -7080933 + AluSx SINE Alu 1 308 -4 180 284 81 0 chr2 246175702 246175776 -7080807 - MIR SINE MIR -63 199 120 22 0 0 0 chr2 246176153 246176175 -7080408 + AT_rich Low_complexity Low_complexity 1 22 0 2241 98 58 0 chr2 246176602 246176897 -7079686 - AluSx SINE Alu 0 312 1 449 215 47 0 chr2 246178425 246178532 -7078051 - MER94 DNA DNA -16 118 7 2461 81 10 13 chr2 246178846 246179156 -7077427 - AluSc SINE Alu 0 309 1 370 259 45 27 chr2 246179322 246179434 -7077149 + MLT1H1 LTR MaLR 225 338 -217 2075 239 23 5 chr2 246179440 246179880 -7076703 - MER82 DNA MER2_type -6 647 200 687 258 6 0 chr2 246180180 246180339 -7076244 - MER82 DNA MER2_type -449 204 45 870 230 44 19 chr2 246180344 246180584 -7075999 + MLT1H1 LTR MaLR 298 553 -2 2482 106 27 8 chr2 246181009 246181377 -7075206 + THE1C LTR MaLR 1 375 0 1169 194 38 35 chr2 246182131 246182589 -7073994 + MLT1D LTR MaLR 1 505 0 198 341 22 59 chr2 246182592 246182727 -7073856 - MIR SINE MIR -109 153 24 383 260 62 34 chr2 246183634 246183780 -7072803 - L2 LINE L2 0 3313 3164 1717 144 48 0 chr2 246185029 246185320 -7071263 - AluJb SINE Alu -3 309 5 506 281 178 0 chr2 246185585 246185827 -7070756 + MER102b DNA MER1_type 47 331 -10 373 263 25 17 chr2 246186523 246186641 -7069942 - L1MD1 LINE L1 -10 6232 6114 1714 143 24 50 chr2 246186650 246187000 -7069583 + MSTC LTR MaLR 31 428 0 1037 183 170 0 chr2 246187000 246187230 -7069353 - L1MD2 LINE L1 -128 6231 5963 1105 69 0 7 chr2 246187276 246187420 -7069163 + AluSq/x SINE Alu 1 143 -170 741 208 7 0 chr2 246187421 246187575 -7069008 - L1MD2 LINE L1 -346 5820 5666 459 250 100 6 chr2 246187994 246188051 -7068532 - MER5A DNA MER1_type -7 182 132 2113 112 0 0 chr2 246188051 246188345 -7068238 + AluSg SINE Alu 1 294 -16 459 250 100 6 chr2 246188345 246188447 -7068136 - MER5A DNA MER1_type -57 132 8 279 265 20 39 chr2 246188853 246188955 -7067628 - MARNA DNA Mariner -145 441 342 207 133 0 44 chr2 246189261 246189306 -7067277 + (GGGTG)n Simple_repeat Simple_repeat 4 46 0 2102 97 0 32 chr2 246189699 246190008 -7066575 - AluSg SINE Alu -11 299 1 649 259 84 53 chr2 246190061 246190468 -7066115 + MLT1J1 LTR MaLR 29 450 0 863 281 82 49 chr2 246190690 246190936 -7065647 - L1ME4a LINE L1 -8 6113 5877 2004 133 0 9 chr2 246190936 246191251 -7065332 - AluSx SINE Alu 0 312 1 863 281 82 49 chr2 246191251 246191577 -7065006 - L1ME4a LINE L1 -244 5877 5522 2198 188 37 105 chr2 246192271 246192872 -7063711 - MLT1F1 LTR MaLR -2 565 6 497 246 24 8 chr2 246192981 246193107 -7063476 - MER46C DNA MER2_type -3 335 208 845 228 10 15 chr2 246193446 246193643 -7062940 - MER46C DNA MER2_type -140 198 3 2000 195 13 1 chr2 246193713 246194075 -7062508 + MLT1A1 LTR MaLR 1 424 -4 25 31 0 0 chr2 246194096 246194128 -7062455 + AT_rich Low_complexity Low_complexity 1 32 0 2334 148 36 19 chr2 246195979 246196398 -7060185 - MSTB LTR MaLR 0 426 1 1174 264 127 42 chr2 246196687 246197183 -7059400 + MLT1H LTR MaLR 10 547 -2 2353 155 62 0 chr2 246197199 246197600 -7058983 + MSTB LTR MaLR 1 426 0 27 0 0 0 chr2 246197688 246197715 -7058868 + AT_rich Low_complexity Low_complexity 1 27 0 180 152 0 0 chr2 246198061 246198094 -7058489 + T-rich Low_complexity Low_complexity 1 33 0 312 307 69 55 chr2 246199279 246199497 -7057086 - MIR SINE MIR -17 245 25 447 63 0 0 chr2 246199595 246199658 -7056925 + (TG)n Simple_repeat Simple_repeat 2 64 0 187 194 0 0 chr2 246199900 246199931 -7056652 + MIR SINE MIR 116 146 -116 291 310 35 9 chr2 246200743 246200859 -7055724 + MIR SINE MIR 123 241 -21 2129 154 28 3 chr2 246201849 246202206 -7054377 + MER47A DNA MER2_type 1 366 0 262 197 30 76 chr2 246202399 246202465 -7054118 - L2 LINE L2 0 3272 3210 1734 149 11 0 chr2 246202813 246203116 -7053467 - AluSx SINE Alu 0 310 5 565 291 119 18 chr2 246203323 246203666 -7052917 - L1MC4a LINE L1 -1868 5940 5563 1761 126 33 0 chr2 246204542 246204813 -7051770 - AluSq SINE Alu -33 280 1 387 304 57 53 chr2 246205241 246205488 -7051095 + L3 LINE CR1 1143 1390 -187 * 574 291 122 0 chr2 246205481 246205677 -7050906 + MIR SINE MIR 19 238 -24 252 175 0 63 chr2 246206328 246206391 -7050192 + AluSp/q SINE Alu 242 300 -3 * 456 126 10 87 chr2 246206373 246206476 -7050107 + MER63 DNA MER1_type 655 749 -311 1525 50 0 0 chr2 246207405 246207585 -7048998 - MLT2A2 LTR ERVL 0 453 274 313 26 0 0 chr2 246207585 246207624 -7048959 - MLT2A2 LTR ERVL -408 45 7 990 177 68 5 chr2 246209857 246210049 -7046534 + MER2 DNA MER2_type 3 206 -139 239 235 0 0 chr2 246210075 246210126 -7046457 + MER2 DNA MER2_type 269 319 -26 438 247 86 43 chr2 246210185 246210347 -7046236 + MIR SINE MIR 17 185 -77 1650 40 5 0 chr2 246210456 246210655 -7045928 - AluY SINE Alu -13 298 99 1645 163 3 3 chr2 246210734 246211022 -7045561 + AluSp SINE Alu 5 292 -21 417 363 56 8 chr2 246212019 246212253 -7044330 + L1ME4a LINE L1 5678 5922 -199 707 240 122 10 chr2 246212612 246212808 -7043775 + MIR SINE MIR 44 261 -1 452 222 103 8 chr2 246214062 246214188 -7042395 + MER69 DNA AcHobo 1 138 -1088 1450 202 0 42 chr2 246214188 246214500 -7042083 + AluJo SINE Alu 1 299 -13 1859 223 47 32 chr2 246214645 246215241 -7041342 + MER69 DNA AcHobo 1911 2515 -11 182 314 48 79 chr2 246215601 246215891 -7040692 + L2 LINE L2 2626 2906 -408 1725 148 13 31 chr2 246216059 246216377 -7040206 - AluJb SINE Alu 0 312 1 1575 155 25 22 chr2 246216699 246216977 -7039606 + AluSx SINE Alu 1 279 -33 428 77 15 0 chr2 246216978 246217043 -7039540 + (GA)n Simple_repeat Simple_repeat 1 66 0 189 171 0 0 chr2 246217046 246217081 -7039502 + GA-rich Low_complexity Low_complexity 2 36 0 555 265 74 101 chr2 246217594 246217892 -7038691 - MLT1K LTR MaLR -2 586 297 2992 194 31 61 chr2 246218056 246218766 -7037817 + LTR8 LTR ERV1 2 690 -1 650 211 78 7 chr2 246219249 246219391 -7037192 + MER96 DNA MER1_type? 1 152 -23 436 254 109 0 chr2 246219389 246219499 -7037084 - MER96 DNA MER1_type? -48 127 6 * 410 183 0 0 chr2 246219923 246219994 -7036589 - AluJ/FRAM SINE Alu -13 289 219 965 181 42 9 chr2 246219994 246220209 -7036374 - L1MB8 LINE L1 -14 6164 5943 192 77 0 0 chr2 246220495 246220521 -7036062 + (A)n Simple_repeat Simple_repeat 1 26 0 243 0 0 0 chr2 246220717 246220744 -7035839 + (TG)n Simple_repeat Simple_repeat 1 27 0 258 346 0 0 chr2 246220761 246220865 -7035718 + (TG)n Simple_repeat Simple_repeat 2 105 0 300 360 41 7 chr2 246221136 246221283 -7035300 - L1ME LINE L1 -477 5644 5493 218 210 0 81 chr2 246221895 246221957 -7034626 + L2 LINE L2 3257 3313 0 1897 127 0 0 chr2 246222072 246222340 -7034243 + AluSx SINE Alu 1 268 -44 324 0 0 0 chr2 246222351 246222387 -7034196 + (TAA)n Simple_repeat Simple_repeat 2 37 0 287 157 14 0 chr2 246223618 246223688 -7032895 + (CACCAT)n Simple_repeat Simple_repeat 1 71 0 600 181 11 11 chr2 246223728 246223905 -7032678 + (CACCAT)n Simple_repeat Simple_repeat 3 179 0 515 213 30 5 chr2 246223961 246224371 -7032212 + (CACCAT)n Simple_repeat Simple_repeat 1 420 0 338 300 100 14 chr2 246224384 246224524 -7032059 - MIR SINE MIR -47 215 64 335 330 30 96 chr2 246225031 246225428 -7031155 - L2 LINE L2 -9 3263 2893 526 252 0 0 chr2 246225442 246225545 -7031038 - MER81 DNA DNA -9 105 3 239 362 43 22 chr2 246225545 246225683 -7030900 - L2 LINE L2 -459 2855 2715 24 32 0 0 chr2 246226455 246226486 -7030097 + AT_rich Low_complexity Low_complexity 1 31 0 217 349 30 0 chr2 246226486 246226552 -7030031 + L2 LINE L2 3137 3204 -68 576 216 11 127 chr2 246226580 246226698 -7029885 - MER5B DNA MER1_type 0 178 85 2100 112 0 0 chr2 246226698 246227025 -7029558 - AluSx SINE Alu 0 327 1 576 216 11 127 chr2 246227025 246227086 -7029497 - MER5B DNA MER1_type -93 85 19 345 313 61 8 chr2 246227092 246227223 -7029360 + MER5A DNA MER1_type 49 186 -3 337 290 28 19 chr2 246227377 246227484 -7029099 - MER5B DNA MER1_type -70 108 1 1812 174 39 13 chr2 246227662 246227973 -7028610 - MER7A DNA MER2_type 0 346 30 1637 184 51 60 chr2 246227975 246228410 -7028173 - MLT1C LTR MaLR -31 436 6 186 103 0 0 chr2 246228651 246228680 -7027903 + (CA)n Simple_repeat Simple_repeat 2 30 0 2216 157 113 9 chr2 246229682 246230114 -7026469 - L1MA7 LINE L1 -188 6103 5627 271 262 0 0 chr2 246230147 246230208 -7026375 + (TG)n Simple_repeat Simple_repeat 2 62 0 288 311 58 18 chr2 246231422 246231629 -7024954 + MIR SINE MIR 17 232 -30 2325 108 73 13 chr2 246231910 246232438 -7024145 - MER51A LTR ERV1 0 634 4 251 246 36 45 chr2 246232565 246232675 -7023908 + L1MC4a LINE L1 6070 6178 -1630 5618 23 0 0 chr2 246232912 246233937 -7022646 + L1PA4 LINE L1 4873 5897 -258 360 301 77 6 chr2 246233942 246234098 -7022485 - L2 LINE L2 -609 2705 2539 641 201 0 43 chr2 246234210 246234349 -7022234 - FLAM_A SINE Alu 0 133 1 12797 32 2 1 chr2 246234642 246236158 -7020425 - L1P LINE L1 -1298 4848 3331 1957 30 0 13 chr2 246236158 246236385 -7020198 + L1PA3 LINE L1 5924 6154 -1 35 0 0 0 chr2 246236387 246236422 -7020161 + AT_rich Low_complexity Low_complexity 1 35 0 1948 114 0 11 chr2 246236425 246236696 -7019887 + AluSc SINE Alu 1 268 -41 543 332 137 2 chr2 246236825 246237256 -7019327 + L2 LINE L2 2474 2962 -352 1337 194 17 106 chr2 246238914 246239321 -7017262 - MLT1D LTR MaLR -2 503 133 790 277 82 10 chr2 246239480 246239892 -7016691 - L1M4 LINE L1 -1331 4815 4374 1696 196 5 42 chr2 246239907 246240224 -7016359 - L1MCa LINE L1 -5182 1244 917 1652 154 3 74 chr2 246240224 246240396 -7016187 - AluJb SINE Alu -11 301 118 194 0 39 0 chr2 246240396 246240422 -7016161 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1668 101 0 0 chr2 246240422 246240630 -7015953 - AluSg/x SINE Alu -27 283 76 1652 154 3 74 chr2 246240630 246240780 -7015803 - AluJb SINE Alu -192 120 1 1696 196 5 42 chr2 246240780 246240845 -7015738 - L1MCa LINE L1 -5509 917 876 3238 187 24 60 chr2 246240845 246241545 -7015038 - LTR8 LTR ERV1 0 691 17 404 130 13 13 chr2 246241589 246241666 -7014917 - L1MCa LINE L1 -5546 880 804 192 77 0 0 chr2 246242032 246242058 -7014525 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 2244 121 0 7 chr2 246242160 246242467 -7014116 + AluSx SINE Alu 1 305 -7 198 0 0 0 chr2 246244462 246244484 -7012099 + (A)n Simple_repeat Simple_repeat 1 22 0 299 246 112 65 chr2 246244830 246245045 -7011538 - MLT1L LTR MaLR -79 536 312 1660 207 38 23 chr2 246245082 246245478 -7011105 - L1MB5 LINE L1 -8 6166 5765 262 235 84 42 chr2 246245488 246245607 -7010976 - MLT1L LTR MaLR -325 290 167 2153 146 37 58 chr2 246245883 246246314 -7010269 - MSTB LTR MaLR -4 422 1 2396 211 33 15 chr2 246246687 246247233 -7009350 + MER74A LTR ERVL 1 556 -2 2183 119 3 0 chr2 246247517 246247811 -7008772 - AluSx SINE Alu -17 295 1 257 310 54 39 chr2 246248334 246248463 -7008120 + L2 LINE L2 3182 3312 -1 212 0 0 35 chr2 246248793 246248822 -7007761 + (TG)n Simple_repeat Simple_repeat 2 29 0 190 236 55 88 chr2 246248969 246249151 -7007432 - L2 LINE L2 -831 2483 2308 555 286 23 65 chr2 246249555 246249817 -7006766 - MIR SINE MIR -3 259 9 409 156 11 206 chr2 246249818 246249879 -7006704 + MER5A DNA MER1_type 16 87 -102 1772 191 3 0 chr2 246249879 246250182 -7006401 + AluJb SINE Alu 1 304 -8 409 156 11 206 chr2 246250182 246250300 -7006283 + MER5A DNA MER1_type 87 160 -29 236 320 135 17 chr2 246250313 246250491 -7006092 + L2 LINE L2 2860 3058 -214 1002 66 0 8 chr2 246250757 246250878 -7005705 + AluSq/x SINE Alu 18 137 -176 1042 151 0 0 chr2 246251131 246251290 -7005293 + AluSg/x SINE Alu 152 310 -2 186 43 0 0 chr2 246251298 246251321 -7005262 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 1380 187 0 61 chr2 246251401 246251679 -7004904 - MSTD LTR MaLR 0 396 136 432 206 47 65 chr2 246251976 246252083 -7004500 - MSTD LTR MaLR -323 105 1 448 288 16 16 chr2 246252336 246252461 -7004122 - HsTC2 DNA Tc2 -1773 125 1 1921 158 42 25 chr2 246252758 246253118 -7003465 - MER47A DNA MER2_type 0 366 1 186 324 14 0 chr2 246253455 246253526 -7003057 + L2 LINE L2 3177 3248 -24 404 336 83 19 chr2 246253537 246253900 -7002683 - L2 LINE L2 0 3313 2928 325 306 37 37 chr2 246254684 246254818 -7001765 + L2 LINE L2 3180 3313 0 295 299 109 62 chr2 246255925 246256142 -7000441 + L3 LINE CR1 1105 1342 -235 1626 155 47 22 chr2 246256142 246256440 -7000143 + AluSx SINE Alu 1 305 0 295 299 109 62 chr2 246256440 246256525 -7000058 + L3 LINE CR1 1342 1422 -155 233 218 0 18 chr2 246258842 246258897 -6997686 + MER117 DNA MER1_type 6 59 -138 2430 219 93 38 chr2 246258899 246259706 -6996877 - L1MC4 LINE L1 -159 7883 7033 223 135 0 0 chr2 246259862 246259899 -6996684 - MIR SINE MIR -13 249 213 184 162 54 0 chr2 246259896 246259933 -6996650 + MIR SINE MIR 222 260 -2 * 1002 204 22 52 chr2 246259978 246260029 -6996554 - L1MC4 LINE L1 -989 7053 7002 2150 117 19 10 chr2 246260029 246260336 -6996247 - AluJb SINE Alu -2 310 1 1002 204 22 52 chr2 246260336 246260515 -6996068 - L1MC4 LINE L1 -1040 7002 6830 391 252 7 36 chr2 246260512 246260574 -6996009 - L1MEc LINE L1 -3563 2652 2590 * 1587 169 10 28 chr2 246260574 246260864 -6995719 - AluJo SINE Alu -7 305 21 391 252 7 36 chr2 246260864 246260940 -6995643 - L1MEc LINE L1 -3625 2590 2518 657 226 57 122 chr2 246260982 246261231 -6995352 + MLT1A2 LTR MaLR 31 250 -124 2256 106 7 0 chr2 246261231 246261532 -6995051 - AluSg SINE Alu -5 305 3 657 226 57 122 chr2 246261532 246261650 -6994933 + MLT1A2 LTR MaLR 250 374 0 369 225 71 24 chr2 246261653 246261822 -6994761 - L1MEc LINE L1 -3759 2456 2280 271 250 44 31 chr2 246261896 246262056 -6994527 - L1MEc LINE L1 -4142 2254 2093 246 329 0 0 chr2 246262258 246262328 -6994255 + L2 LINE L2 3153 3222 -50 2263 108 65 29 chr2 246262619 246262970 -6993613 + THE1B LTR MaLR 1 364 0 225 0 0 0 chr2 246263198 246263223 -6993360 + (A)n Simple_repeat Simple_repeat 1 25 0 183 238 0 0 chr2 246263237 246263279 -6993304 - MIR SINE MIR -9 253 212 3493 98 19 0 chr2 246263715 246264182 -6992401 - HSMAR1 DNA Mariner -236 1051 576 2224 121 0 0 chr2 246265135 246265432 -6991151 - AluSx SINE Alu -13 299 3 194 313 16 0 chr2 246266905 246266969 -6989614 - L2 LINE L2 -10 3303 3239 2454 256 69 87 chr2 246267212 246268617 -6987966 - HAL1 LINE L1 -4 2503 1129 2070 110 0 0 chr2 246268617 246268880 -6987703 - AluSx SINE Alu -28 284 22 2454 256 69 87 chr2 246268880 246269102 -6987481 - HAL1 LINE L1 -1378 1129 905 1129 125 12 0 chr2 246269108 246269276 -6987307 - MER4E LTR ERV1 0 766 597 4781 53 5 8 chr2 246269296 246269897 -6986686 - L1PA7 LINE L1 -1 6153 5555 2477 101 96 0 chr2 246269897 246270283 -6986300 + L1P LINE L1 4489 4911 -1235 3087 144 71 47 chr2 246270295 246270887 -6985696 - MER4D LTR ERV1 -297 606 1 450 325 113 36 chr2 246271488 246271931 -6984652 - L2 LINE L2 -1 3312 2836 266 285 133 7 chr2 246272046 246272197 -6984386 - L2 LINE L2 -762 2552 2383 198 191 0 0 chr2 246272968 246273010 -6983573 + (TG)n Simple_repeat Simple_repeat 1 42 0 1328 243 82 21 chr2 246273944 246274403 -6982180 - MLT1E LTR MaLR 0 593 103 251 317 138 8 chr2 246274394 246274517 -6982066 - MLT1E LTR MaLR -454 139 1 * 1061 181 8 68 chr2 246274518 246274583 -6982000 + MER58A DNA MER1_type 1 68 -2352 1703 173 23 3 chr2 246274583 246274917 -6981666 - AluJo SINE Alu 0 312 2 1061 181 8 68 chr2 246274917 246275088 -6981495 + MER58A DNA MER1_type 68 223 -1 516 227 62 34 chr2 246275093 246275269 -6981314 - L1MC4a LINE L1 -1910 5898 5718 1835 229 89 28 chr2 246275292 246275890 -6980693 + LTR48B LTR ERV1 1 634 -10 1745 145 25 4 chr2 246276005 246276281 -6980302 + AluJb SINE Alu 14 295 -17 22 0 0 0 chr2 246277147 246277169 -6979414 + AT_rich Low_complexity Low_complexity 1 22 0 2111 115 0 0 chr2 246277338 246277633 -6978950 + AluSq SINE Alu 1 295 -18 239 284 137 0 chr2 246277837 246277939 -6978644 + HAL1 LINE L1 1431 1546 -961 248 167 103 90 chr2 246278175 246278216 -6978367 - MER53 DNA DNA -89 100 61 1844 166 7 0 chr2 246278216 246278511 -6978072 + AluSx SINE Alu 1 297 -15 248 167 103 90 chr2 246278511 246278547 -6978036 - MER53 DNA DNA -128 61 22 227 261 0 58 chr2 246278713 246278782 -6977801 - MLT1J LTR MaLR -334 177 113 1206 240 142 8 chr2 246278974 246279383 -6977200 - MLT1H LTR MaLR -3 546 43 193 263 40 71 chr2 246279429 246279528 -6977055 - L2 LINE L2 -6 3307 3212 1729 147 32 0 chr2 246279618 246279903 -6976680 + AluSx SINE Alu 1 294 -18 253 196 0 0 chr2 246279990 246280041 -6976542 - L1ME3A LINE L1 -8 6162 6112 3619 68 4 19 chr2 246280141 246280614 -6975969 + MER4E LTR ERV1 301 766 0 1251 249 174 25 chr2 246280614 246281039 -6975544 - L1MCb LINE L1 -5202 843 328 4024 102 13 4 chr2 246281039 246281588 -6974995 + MER41A LTR ERV1 1 554 0 1251 249 174 25 chr2 246281588 246281672 -6974911 - L1MCb LINE L1 -5717 328 258 807 209 78 5 chr2 246281682 246281873 -6974710 - L1MCb LINE L1 -6206 358 154 810 276 92 18 chr2 246281908 246282353 -6974230 - L1M4 LINE L1 -2299 3847 3370 1178 272 69 9 chr2 246282363 246282925 -6973658 - L1M4 LINE L1 -2848 3298 2703 700 177 46 0 chr2 246282929 246283059 -6973524 - Charlie1a DNA MER1_type -1 1454 1319 253 32 0 0 chr2 246283248 246283279 -6973304 - AluY SINE Alu -271 31 1 364 318 73 21 chr2 246283433 246283666 -6972917 - L2 LINE L2 -339 2975 2731 184 309 45 36 chr2 246283717 246283827 -6972756 - MIR SINE MIR -62 146 36 505 129 106 94 chr2 246284608 246284778 -6971805 - MER33 DNA MER1_type -9 315 144 1397 101 5 5 chr2 246284779 246284977 -6971606 - AluSg/x SINE Alu -19 293 96 513 163 122 16 chr2 246284980 246285103 -6971480 - MER33 DNA MER1_type -188 136 1 4953 187 55 80 chr2 246285470 246286798 -6969785 - Charlie1a DNA MER1_type -160 1295 1 2392 74 0 0 chr2 246287053 246287364 -6969219 - AluY SINE Alu 0 311 1 240 242 16 16 chr2 246288500 246288562 -6968021 + L2 LINE L2 3211 3272 0 1043 260 69 15 chr2 246288711 246289046 -6967537 + LTR16C LTR ERVL 129 481 -10 262 340 50 0 chr2 246289328 246289428 -6967155 + L2 LINE L2 3208 3312 -1 1644 164 25 11 chr2 246289737 246290012 -6966571 + MLT1F LTR MaLR 264 542 0 1892 139 14 7 chr2 246290131 246290560 -6966023 - AluSx SINE Alu 0 431 1 364 145 32 0 chr2 246291392 246291454 -6965129 + L2 LINE L2 3206 3269 -3 255 254 32 0 chr2 246291563 246291626 -6964957 - L2 LINE L2 -8 3305 3241 196 274 211 32 chr2 246291631 246291726 -6964857 + MIR SINE MIR 128 239 -23 793 261 11 0 chr2 246291930 246292106 -6964477 - MER45A DNA AcHobo 0 178 1 512 279 68 7 chr2 246292774 246292921 -6963662 - L2 LINE L2 0 3313 3158 448 273 97 18 chr2 246293795 246293960 -6962623 - MLT1J LTR MaLR -323 188 11 1177 288 47 59 chr2 246294265 246294495 -6962088 - MLT1J LTR MaLR 0 511 280 1602 186 24 0 chr2 246294495 246294790 -6961793 + AluJo SINE Alu 1 302 -10 1177 288 47 59 chr2 246294790 246295066 -6961517 - MLT1J LTR MaLR -231 280 11 512 194 69 69 chr2 246295467 246295673 -6960910 + MLT1C LTR MaLR 1 215 -175 16474 105 1 8 chr2 246295869 246298134 -6958449 - L1P LINE L1 -3872 2274 26 213 262 0 0 chr2 246298496 246298557 -6958026 + CT-rich Low_complexity Low_complexity 4 64 0 180 0 0 0 chr2 246298558 246298578 -6958005 + (TTTTA)n Simple_repeat Simple_repeat 4 23 0 2130 103 0 7 chr2 246298583 246298873 -6957710 - AluSx SINE Alu -24 288 1 329 214 136 0 chr2 246298934 246299037 -6957546 + MIR SINE MIR 110 226 -36 254 313 121 33 chr2 246299741 246299923 -6956660 + MIR SINE MIR 59 256 -6 1285 173 113 36 chr2 246300517 246300818 -6955765 - MER1B DNA MER1_type -12 327 4 739 327 113 44 chr2 246301017 246301412 -6955171 + L2 LINE L2 2230 2596 -717 2149 207 31 15 chr2 246301412 246301870 -6954713 - MLT1C LTR MaLR 0 467 3 739 327 113 44 chr2 246301870 246302488 -6954095 + L2 LINE L2 2596 3313 0 978 193 10 19 chr2 246302577 246302784 -6953799 - MER20 DNA MER1_type 0 219 15 231 341 22 11 chr2 246302959 246303050 -6953533 + MIR3 SINE MIR 15 106 -102 1652 172 7 3 chr2 246303889 246304186 -6952397 - AluJo SINE Alu -14 298 1 1236 227 47 104 chr2 246305187 246305658 -6950925 + MLT1C LTR MaLR 14 457 -10 256 84 102 4 chr2 246306903 246306949 -6949634 - MLT2C2 LTR ERVL 0 464 423 22 0 0 0 chr2 246307209 246307231 -6949352 + AT_rich Low_complexity Low_complexity 1 22 0 278 329 128 0 chr2 246307614 246307778 -6948805 - L2 LINE L2 -6 3307 3123 625 248 0 20 chr2 246307859 246308012 -6948571 - MIR SINE MIR -50 212 63 2225 75 0 60 chr2 246309160 246309479 -6947104 + AluSx SINE Alu 1 300 -12 1584 192 48 63 chr2 246309507 246309903 -6946680 + MLT1B LTR MaLR 1 390 0 308 262 57 25 chr2 246310207 246310329 -6946254 + MER5A DNA MER1_type 34 159 -30 1779 159 0 7 chr2 246310725 246311021 -6945562 - AluSx SINE Alu -18 294 1 289 325 175 0 chr2 246311470 246311624 -6944959 + MER5A DNA MER1_type 9 189 0 312 158 0 0 chr2 246311716 246311773 -6944810 + (TATAA)n Simple_repeat Simple_repeat 5 61 0 485 331 135 31 chr2 246312781 246313336 -6943247 + HAL1b LINE L1 121 733 -615 382 315 4 115 chr2 246313468 246313703 -6942880 + L1MC4a LINE L1 6407 6615 -1193 233 29 29 0 chr2 246313719 246313753 -6942830 + (CA)n Simple_repeat Simple_repeat 1 35 0 1750 144 17 27 chr2 246313892 246314190 -6942393 + AluJb SINE Alu 1 295 -17 1208 292 25 60 chr2 246314460 246315015 -6941568 - ERVL LTR ERVL -1407 4357 3822 373 274 9 0 chr2 246315132 246315238 -6941345 - MER103 DNA DNA -3 163 57 1680 153 17 10 chr2 246315395 246315695 -6940888 - AluJo SINE Alu -10 302 1 208 143 0 0 chr2 246316866 246316901 -6939682 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1980 130 7 0 chr2 246317279 246317578 -6939005 + AluJb SINE Alu 1 301 -11 330 299 196 21 chr2 246317716 246317910 -6938673 - MIR SINE MIR -4 258 31 1967 133 7 0 chr2 246319950 246320259 -6936324 - AluSx SINE Alu 0 312 2 392 203 78 70 chr2 246320510 246320638 -6935945 - MER69 DNA AcHobo -1090 136 8 225 229 48 12 chr2 246321973 246322056 -6934527 + CT-rich Low_complexity Low_complexity 5 90 0 346 214 11 56 chr2 246323469 246323558 -6933025 - Charlie8 DNA MER1_type -2205 212 128 1175 261 15 18 chr2 246323609 246323939 -6932644 - L1ME3A LINE L1 -11 6159 5831 423 231 132 94 chr2 246324251 246324463 -6932120 - MIR SINE MIR -3 259 40 2046 121 21 63 chr2 246324948 246325111 -6931472 + MLT1A1 LTR MaLR 1 169 -196 2095 141 3 3 chr2 246325111 246325423 -6931160 + AluSx SINE Alu 1 312 0 2046 121 21 63 chr2 246325423 246325640 -6930943 + MLT1A1 LTR MaLR 169 365 0 1217 219 67 72 chr2 246326679 246327109 -6929474 - MLT1C LTR MaLR -6 461 34 379 233 203 63 chr2 246327160 246327327 -6929256 + L2 LINE L2 1513 1655 -1659 2130 118 10 0 chr2 246327327 246327633 -6928950 - AluSx SINE Alu -3 309 1 379 233 203 63 chr2 246327633 246327800 -6928783 + L2 LINE L2 1655 1894 -1420 345 318 24 8 chr2 246327824 246327950 -6928633 - MER94 DNA DNA -6 128 1 329 273 29 29 chr2 246327954 246328093 -6928490 + L2 LINE L2 1901 2039 -1275 241 241 17 0 chr2 246328180 246328238 -6928345 - LTR67 LTR ERVL -4 553 495 182 358 0 0 chr2 246328334 246328401 -6928182 - L2 LINE L2 -1475 1839 1773 752 207 18 41 chr2 246328411 246328580 -6928003 + FRAM SINE Alu 1 164 -12 1493 194 43 19 chr2 246328708 246329125 -6927458 + L1M4 LINE L1 2788 3214 -2932 2195 198 58 12 chr2 246329336 246329815 -6926768 - MLT1D LTR MaLR 0 505 5 2062 135 10 6 chr2 246330291 246330603 -6925980 - AluSq SINE Alu 0 313 1 23027 46 2 7 chr2 246330746 246334383 -6922200 - L1PA5 LINE L1 -3 6151 2530 1871 149 0 4 chr2 246334483 246334752 -6921831 - AluJb SINE Alu -44 268 1 850 99 59 0 chr2 246334753 246334905 -6921678 + L1MA7 LINE L1 6128 6288 -3 1614 81 65 69 chr2 246335616 246335655 -6920928 - MSTA LTR MaLR 0 428 390 1836 74 0 4 chr2 246335655 246335885 -6920698 + AluY SINE Alu 79 307 -4 1614 81 65 69 chr2 246335885 246336105 -6920478 - MSTA LTR MaLR -38 390 170 2431 94 7 0 chr2 246337023 246337331 -6919252 + AluSg SINE Alu 1 310 0 213 341 61 23 chr2 246337483 246337615 -6918968 + MER5B DNA MER1_type 4 140 -38 206 222 0 48 chr2 246338221 246338284 -6918299 + C-rich Low_complexity Low_complexity 6 65 0 2185 130 39 30 chr2 246339056 246339417 -6917166 - THE1B LTR MaLR 0 364 1 262 214 143 50 chr2 246339725 246339865 -6916718 + LTR33A LTR ERVL 65 217 -306 279 66 16 33 chr2 246340121 246340182 -6916401 + (TTTG)n Simple_repeat Simple_repeat 2 61 0 2244 95 3 0 chr2 246340185 246340470 -6916113 - AluSx SINE Alu -26 286 1 1987 173 3 0 chr2 246340805 246341129 -6915454 + MLT1A1 LTR MaLR 41 365 0 555 289 138 0 chr2 246342013 246342317 -6914266 + L2 LINE L2 2807 3152 -161 1665 199 85 15 chr2 246342374 246342715 -6913868 - MLT1A1 LTR MaLR 0 365 1 450 284 45 0 chr2 246342799 246342954 -6913629 + L1MC5 LINE L1 5670 5831 -1977 2086 136 19 50 chr2 246343050 246343426 -6913157 + THE1B LTR MaLR 1 364 0 10447 113 53 3 chr2 246343426 246344930 -6911653 + THE1B-int LTR MaLR 1 1580 0 1672 125 134 41 chr2 246344930 246345273 -6911310 + THE1C LTR MaLR 1 375 0 223 137 39 0 chr2 246345678 246345729 -6910854 + (CAAA)n Simple_repeat Simple_repeat 1 53 0 685 258 60 28 chr2 246345852 246346029 -6910554 + L1MC5 LINE L1 6448 6618 -1225 2267 114 0 3 chr2 246346029 246346326 -6910257 - AluSx SINE Alu -16 296 1 685 258 60 28 chr2 246346326 246346520 -6910063 + L1MC5 LINE L1 6618 6830 -1013 598 290 109 47 chr2 246346879 246347229 -6909354 + L2 LINE L2 2262 2652 -662 5404 108 17 5 chr2 246347229 246347999 -6908584 - MER4E LTR ERV1 0 779 1 598 290 109 47 chr2 246347999 246348134 -6908449 + L2 LINE L2 2652 2777 -537 1011 112 0 8 chr2 246348141 246348275 -6908308 + AluSg1 SINE Alu 1 133 -176 2146 121 0 0 chr2 246348276 246348591 -6907992 + AluY SINE Alu 1 311 0 394 101 159 0 chr2 246348939 246349008 -6907575 - MADE1 DNA Mariner 0 80 1 251 223 173 50 chr2 246349011 246349150 -6907433 + L2 LINE L2 3158 3313 0 1910 159 0 0 chr2 246349262 246349557 -6907026 - AluSx SINE Alu -17 295 1 277 350 83 0 chr2 246350695 246350815 -6905768 - MIR SINE MIR -64 198 69 2128 108 3 38 chr2 246351659 246351975 -6904608 + AluSq SINE Alu 1 305 -8 392 254 49 56 chr2 246352859 246353001 -6903582 - L2 LINE L2 -5 3267 3127 340 246 58 29 chr2 246353179 246353414 -6903169 + (ATGTG)n Simple_repeat Simple_repeat 1 241 0 331 200 35 87 chr2 246353860 246353975 -6902608 + L2 LINE L2 3205 3313 0 21 36 0 0 chr2 246354208 246354236 -6902347 + AT_rich Low_complexity Low_complexity 1 28 0 1914 198 45 59 chr2 246354785 246355165 -6901418 - MLT1D LTR MaLR -3 502 129 2346 144 40 9 chr2 246355165 246355587 -6900996 + LTR23 LTR ERV1 1 435 -2 1914 198 45 59 chr2 246355587 246355715 -6900868 - MLT1D LTR MaLR -376 129 1 544 222 55 94 chr2 246357266 246357541 -6899042 + MER4C LTR ERV1 1 264 -201 * 841 237 108 47 chr2 246357515 246357793 -6898790 + MER4C LTR ERV1 168 462 -3 566 201 17 11 chr2 246358342 246358516 -6898067 + (CCA)n Simple_repeat Simple_repeat 1 175 0 808 190 4 12 chr2 246358539 246358799 -6897784 + (CCA)n Simple_repeat Simple_repeat 1 258 0 343 263 111 0 chr2 246358811 246358910 -6897673 + MLT2E LTR ERVL 32 141 -487 339 244 58 90 chr2 246358887 246359043 -6897540 + MLT1H LTR MaLR 157 307 -242 * 1801 131 173 0 chr2 246360456 246360768 -6895815 + MER47A DNA MER2_type 1 366 0 281 176 0 59 chr2 246361879 246361938 -6894645 - MLT1E1 LTR MaLR -4 650 594 3253 211 17 9 chr2 246361938 246362586 -6893997 - MER82 DNA MER2_type 0 653 1 583 121 0 0 chr2 246362712 246362795 -6893788 - AluS SINE Alu -228 84 2 207 88 0 0 chr2 246362808 246362842 -6893741 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 6678 61 9 61 chr2 246362842 246364107 -6892476 - SVA Other Other -915 1363 205 367 248 75 37 chr2 246364675 246364889 -6891694 + L1MEd LINE L1 892 1113 -5006 375 330 76 31 chr2 246364933 246365221 -6891362 + HAL1 LINE L1 1304 1604 -903 192 111 0 0 chr2 246365283 246365319 -6891264 + (TAAAAA)n Simple_repeat Simple_repeat 5 40 0 68 84 0 0 chr2 246365320 246365486 -6891097 + AT_rich Low_complexity Low_complexity 1 166 0 451 194 75 0 chr2 246367036 246367129 -6889454 + MER63 DNA MER1_type 1 726 -110 1153 153 0 0 chr2 246367130 246367306 -6889277 + AluJb SINE Alu 137 312 0 21 0 0 0 chr2 246367471 246367492 -6889091 + AT_rich Low_complexity Low_complexity 1 21 0 30 27 0 0 chr2 246368113 246368150 -6888433 + AT_rich Low_complexity Low_complexity 1 37 0 186 216 0 0 chr2 246369107 246369144 -6887439 - L3b LINE CR1 -8 1575 1539 4481 153 75 8 chr2 246369433 246370205 -6886378 - LTR1B LTR ERV1 -2 824 1 318 50 0 0 chr2 246370383 246370423 -6886160 + (TA)n Simple_repeat Simple_repeat 1 40 0 2245 81 3 0 chr2 246371043 246371338 -6885245 + AluSx SINE Alu 1 296 -16 2251 189 16 36 chr2 246371445 246371890 -6884693 + MLT2B3 LTR ERVL 71 506 -48 2113 121 0 0 chr2 246371989 246372286 -6884297 + AluSx SINE Alu 1 297 -15 492 320 118 13 chr2 246372287 246372515 -6884068 + L2 LINE L2 2155 2406 -908 189 269 26 51 chr2 246372577 246372655 -6883928 - L2 LINE L2 -103 3210 3135 311 323 113 5 chr2 246372797 246372992 -6883591 - L2 LINE L2 -264 3049 2834 405 267 2 11 chr2 246373012 246373126 -6883457 - MLT1I LTR MaLR 0 409 317 513 302 37 5 chr2 246373126 246373315 -6883268 - MLT1I LTR MaLR -213 196 2 298 324 45 72 chr2 246373323 246373545 -6883038 - L2 LINE L2 -528 2786 2571 230 221 29 96 chr2 246374028 246374132 -6882451 + L2 LINE L2 2985 3081 -191 318 242 22 0 chr2 246374193 246374284 -6882299 + (TG)n Simple_repeat Simple_repeat 2 94 0 364 318 56 0 chr2 246374305 246374412 -6882171 + L2 LINE L2 3160 3272 0 920 149 13 7 chr2 246375285 246375439 -6881144 - MLT1A2 LTR MaLR -211 163 9 1754 120 34 0 chr2 246375538 246375805 -6880778 - AluSx SINE Alu 0 312 37 366 323 0 0 chr2 246375812 246375825 -6880758 - L1MA10 LINE L1 -1 6333 6321 2671 242 38 23 chr2 246375825 246376565 -6880018 - L1ME1 LINE L1 -5 6161 5411 2012 121 0 7 chr2 246376932 246377237 -6879346 + AluSg SINE Alu 1 303 -7 220 272 213 43 chr2 246377450 246377685 -6878898 - L2 LINE L2 -95 3177 2903 2147 93 43 0 chr2 246378092 246378393 -6878190 + LTR10C LTR ERV1 278 591 0 1245 150 21 8 chr2 246378393 246378627 -6877956 + L1PB3 LINE L1 5917 6153 -1 246 207 49 0 chr2 246378760 246378842 -6877741 + GA-rich Low_complexity Low_complexity 4 89 0 225 0 0 0 chr2 246381213 246381238 -6875345 + (CA)n Simple_repeat Simple_repeat 2 26 0 420 284 14 28 chr2 246381238 246381379 -6875204 - MER103 DNA DNA -3 163 25 951 212 33 0 chr2 246381953 246382137 -6874446 - MER58A DNA MER1_type -31 193 4 188 282 259 0 chr2 246382276 246382361 -6874222 - MIR SINE MIR -44 218 112 427 283 9 0 chr2 246382523 246382636 -6873947 - MIR SINE MIR -100 162 49 276 100 0 0 chr2 246383262 246383302 -6873281 + (GA)n Simple_repeat Simple_repeat 1 40 0 362 219 73 101 chr2 246383372 246383550 -6873033 - MLT1I LTR MaLR 0 409 237 251 235 0 0 chr2 246383603 246383654 -6872929 - MLT1I LTR MaLR -279 130 80 279 303 86 23 chr2 246383922 246384097 -6872486 + L2 LINE L2 2594 2779 -535 273 278 33 89 chr2 246384085 246384265 -6872318 - MIR SINE MIR 0 262 93 * 2422 189 50 33 chr2 246384304 246384822 -6871761 + MLT1F LTR MaLR 5 531 -11 630 190 109 162 chr2 246384931 246385215 -6871368 - MLT1E LTR MaLR -80 513 220 3410 120 33 6 chr2 246385226 246385710 -6870873 - MER1A DNA MER1_type -23 506 10 472 175 68 19 chr2 246385722 246385825 -6870758 - MLT1E LTR MaLR -429 164 57 256 288 14 27 chr2 246387187 246387260 -6869323 + MIR3 SINE MIR 123 194 -14 248 309 27 55 chr2 246387324 246387434 -6869149 - MER5A DNA MER1_type -38 151 45 * 409 309 32 16 chr2 246387340 246387463 -6869120 + MER5A DNA MER1_type 65 189 0 3299 114 14 43 chr2 246388430 246388939 -6867644 + MER41E LTR ERV1 18 511 -1 185 91 0 30 chr2 246389062 246389095 -6867488 + (TTTTG)n Simple_repeat Simple_repeat 5 36 0 216 0 0 0 chr2 246389209 246389233 -6867350 + (T)n Simple_repeat Simple_repeat 1 24 0 873 203 176 0 chr2 246390906 246391093 -6865490 - MER58A DNA MER1_type -4 220 1 678 267 11 17 chr2 246395109 246395289 -6861294 - L2 LINE L2 -432 2882 2704 506 354 108 0 chr2 246395341 246395536 -6861047 - MIR SINE MIR -8 254 39 2553 130 45 0 chr2 246395586 246395986 -6860597 + L1MA7 LINE L1 5376 5793 -498 256 256 0 0 chr2 246395979 246396069 -6860514 - L1MC4 LINE L1 -1339 6703 6614 * 237 223 0 43 chr2 246395985 246396079 -6860504 + L1MC4 LINE L1 6614 6703 -1339 * 417 161 92 31 chr2 246396104 246396234 -6860349 + L1MA7 LINE L1 5782 5919 -372 2130 86 0 0 chr2 246398014 246398293 -6858290 + AluSg SINE Alu 27 305 -5 403 279 82 0 chr2 246398425 246398572 -6858011 - LTR1B LTR ERV1 -667 159 1 225 0 0 0 chr2 246398766 246398791 -6857792 + (TA)n Simple_repeat Simple_repeat 2 26 0 22 56 0 0 chr2 246398888 246398924 -6857659 + AT_rich Low_complexity Low_complexity 1 36 0 638 257 80 69 chr2 246399468 246399612 -6856971 + L1MCc LINE L1 24 165 -6258 1559 155 16 40 chr2 246399612 246399858 -6856725 + L1MB5 LINE L1 5878 6117 -57 1982 126 13 10 chr2 246399858 246400168 -6856415 - AluSq SINE Alu -2 311 1 1559 155 16 40 chr2 246400168 246400224 -6856359 + L1MB5 LINE L1 6117 6173 -1 638 257 80 69 chr2 246400224 246400515 -6856068 + L1MCc LINE L1 165 464 -5959 1615 223 48 12 chr2 246400601 246401082 -6855501 + L1M4 LINE L1 2804 3301 -2845 370 269 36 83 chr2 246401154 246401347 -6855236 - MLT1K LTR MaLR -324 264 81 2622 98 19 3 chr2 246402984 246403353 -6853230 - THE1C LTR MaLR 0 375 1 411 367 68 23 chr2 246403782 246404237 -6852346 - HAL1b LINE L1 -857 1250 63 1860 136 40 10 chr2 246404482 246404783 -6851800 - MER51B LTR ERV1 0 377 68 416 167 76 16 chr2 246404791 246404864 -6851719 - MER51A LTR ERV1 -224 153 86 182 36 0 36 chr2 246404864 246404892 -6851691 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1809 116 67 0 chr2 246404894 246405162 -6851421 - AluSx SINE Alu -26 286 1 416 167 76 16 chr2 246405162 246405223 -6851360 - MER51A LTR ERV1 -291 86 1 224 301 36 12 chr2 246405720 246405803 -6850780 + L2 LINE L2 3210 3294 -19 249 333 108 0 chr2 246406000 246406111 -6850472 - MIR SINE MIR -39 223 101 299 333 147 0 chr2 246406124 246406253 -6850330 - L2 LINE L2 -1356 1958 1811 2237 113 0 0 chr2 246406262 246406572 -6850011 + AluSx SINE Alu 1 310 -2 252 253 63 44 chr2 246406591 246406749 -6849834 + L1M4 LINE L1 5182 5342 -804 494 320 0 7 chr2 246407038 246407185 -6849398 + MIR SINE MIR 63 208 -54 459 331 95 28 chr2 246407234 246407551 -6849032 - L1ME3A LINE L1 -268 5902 5565 2307 100 0 0 chr2 246407683 246407993 -6848590 - AluSg SINE Alu 0 310 1 227 303 26 0 chr2 246408719 246408795 -6847788 + MIR SINE MIR 60 137 -125 1727 59 5 0 chr2 246409326 246409548 -6847035 - LTR10C LTR ERV1 -368 223 1 2012 112 5 133 chr2 246409548 246409858 -6846725 - L1PB1 LINE L1 -231 5920 5679 657 114 49 16 chr2 246409858 246409981 -6846602 - L1PB3 LINE L1 -1 6153 6027 2012 112 5 133 chr2 246409981 246410100 -6846483 - L1PB1 LINE L1 -472 5679 5546 22 0 0 0 chr2 246410894 246410916 -6845667 + AT_rich Low_complexity Low_complexity 1 22 0 3478 101 9 74 chr2 246410929 246411580 -6845003 - MER4B LTR ERV1 0 779 2 319 272 25 0 chr2 246412536 246412617 -6843966 - MER91A DNA MER1_type -32 164 82 228 308 58 17 chr2 246412795 246412915 -6843668 + LTR67 LTR ERVL 432 556 -1 212 325 0 12 chr2 246413589 246413669 -6842914 + GA-rich Low_complexity Low_complexity 2 80 0 1328 207 8 0 chr2 246413837 246414103 -6842480 + AluJo SINE Alu 31 298 -14 590 342 75 23 chr2 246414146 246414603 -6841980 + L1M4 LINE L1 2110 2600 -3546 714 134 0 0 chr2 246414824 246414951 -6841632 + (TG)n Simple_repeat Simple_repeat 2 128 0 231 306 65 48 chr2 246415159 246415345 -6841238 + MER5A DNA MER1_type 1 189 0 2232 163 62 10 chr2 246415658 246416063 -6840520 + MSTB LTR MaLR 1 426 0 1714 160 11 3 chr2 246416872 246417178 -6839405 - AluSx SINE Alu 0 308 1 4364 222 36 25 chr2 246417666 246417918 -6838665 - L1MDb LINE L1 -4463 1943 1695 2325 77 3 3 chr2 246417918 246418229 -6838354 + AluY SINE Alu 1 311 0 4364 222 36 25 chr2 246418229 246419262 -6837321 - L1MDb LINE L1 -4711 1695 528 2250 86 123 0 chr2 246419262 246419586 -6836997 + THE1B LTR MaLR 1 364 0 4364 222 36 25 chr2 246419586 246420112 -6836471 - L1MDb LINE L1 -5878 528 9 378 272 52 0 chr2 246420374 246420510 -6836073 - MER110A LTR ERV1 0 468 326 200 280 224 0 chr2 246421247 246421354 -6835229 - MIR3 SINE MIR -15 193 63 657 305 49 30 chr2 246421829 246422134 -6834449 - L3 LINE CR1 -28 1549 1239 214 284 138 18 chr2 246422370 246422479 -6834104 + L2 LINE L2 3099 3220 -93 617 290 27 65 chr2 246422879 246423141 -6833442 + MLT1K LTR MaLR 97 348 -240 294 129 65 32 chr2 246423521 246423583 -6833000 + MER112 DNA MER1_type 8 71 -189 260 257 107 14 chr2 246423618 246423758 -6832825 - MER103 DNA DNA -2 164 12 298 297 69 0 chr2 246423783 246423884 -6832699 - L2 LINE L2 -12 3260 3153 281 257 68 0 chr2 246424054 246424128 -6832455 - MER91C DNA MER1_type -47 93 15 808 232 127 77 chr2 246424249 246424302 -6832281 - L1MC4 LINE L1 0 8042 7993 1784 110 4 4 chr2 246424302 246424565 -6832018 + AluSg SINE Alu 45 307 -3 808 232 127 77 chr2 246424565 246425046 -6831537 - L1MC4 LINE L1 -49 7993 7481 217 355 110 18 chr2 246425492 246425720 -6830863 - L2 LINE L2 -177 3095 2847 321 348 24 40 chr2 246425854 246426104 -6830479 - L2 LINE L2 -577 2737 2492 626 201 122 140 chr2 246426320 246426413 -6830170 + L1MD2 LINE L1 6035 6128 -231 270 0 0 0 chr2 246426413 246426443 -6830140 + (CA)n Simple_repeat Simple_repeat 1 30 0 626 201 122 140 chr2 246426443 246426678 -6829905 + L1MD2 LINE L1 6128 6357 -2 1895 106 50 17 chr2 246427224 246427526 -6829057 + AluJb SINE Alu 1 312 0 238 92 79 26 chr2 246428192 246428268 -6828315 + (TTATA)n Simple_repeat Simple_repeat 4 83 0 27 0 0 26 chr2 246428527 246428539 -6828044 + AT_rich Low_complexity Low_complexity 1 12 -25 2126 90 0 3 chr2 246428539 246428829 -6827754 + AluSq SINE Alu 1 289 -24 27 0 0 26 chr2 246428829 246428854 -6827729 + AT_rich Low_complexity Low_complexity 12 37 0 294 217 87 0 chr2 246429235 246429304 -6827279 + MIR SINE MIR 72 146 -116 2273 159 14 33 chr2 246430301 246430728 -6825855 + L1PA16 LINE L1 5729 6147 -19 332 275 33 22 chr2 246430816 246430907 -6825676 - L3 LINE CR1 -4 1573 1482 1409 140 13 0 chr2 246431713 246431941 -6824642 - L1PA14 LINE L1 -1 6160 5930 532 302 90 5 chr2 246432268 246432480 -6824103 + MIR SINE MIR 24 253 -9 357 258 52 142 chr2 246432682 246433162 -6823421 + L2 LINE L2 2835 3271 -1 198 254 109 0 chr2 246433183 246433238 -6823345 - L3 LINE CR1 -504 1073 1013 261 0 0 0 chr2 246433775 246433804 -6822779 + (CA)n Simple_repeat Simple_repeat 1 29 0 2045 101 4 0 chr2 246434184 246434460 -6822123 + AluSx SINE Alu 3 279 -33 1099 124 0 13 chr2 246435375 246435685 -6820898 + (TTCC)n Simple_repeat Simple_repeat 1 305 0 244 336 109 8 chr2 246436179 246436307 -6820276 + L2 LINE L2 3167 3307 -6 33 0 0 42 chr2 246438087 246438120 -6818463 + AT_rich Low_complexity Low_complexity 1 33 -13 317 73 73 0 chr2 246438120 246438175 -6818408 - L1MA8 LINE L1 -5 6286 6228 33 0 0 42 chr2 246438175 246438189 -6818394 + AT_rich Low_complexity Low_complexity 33 46 0 1473 179 28 52 chr2 246438212 246438322 -6818261 + AluJo SINE Alu 5 116 -186 1896 124 3 3 chr2 246438322 246438632 -6817951 + AluSx SINE Alu 1 310 0 1473 179 28 52 chr2 246438632 246438810 -6817773 + AluJo SINE Alu 116 287 -15 2105 157 22 21 chr2 246438835 246439292 -6817291 - L1MA7 LINE L1 -29 6262 5841 561 181 0 0 chr2 246439376 246439509 -6817074 + C-rich Low_complexity Low_complexity 1 133 0 366 209 0 0 chr2 246439533 246439667 -6816916 + C-rich Low_complexity Low_complexity 1 134 0 225 207 110 35 chr2 246439820 246439965 -6816618 - L1M4 LINE L1 -907 5239 5084 1465 325 56 44 chr2 246440066 246440265 -6816318 - HERV16 LTR ERVL -2025 2971 2776 1989 122 3 13 chr2 246440265 246440576 -6816007 - AluSq SINE Alu -5 308 1 1465 325 56 44 chr2 246440576 246441178 -6815405 - HERV16 LTR ERVL -2220 2776 2196 297 284 91 51 chr2 246441283 246441480 -6815103 - HERV16 LTR ERVL -3750 2014 1810 1772 313 59 8 chr2 246441572 246442284 -6814299 - HERV16 LTR ERVL -3420 1576 829 684 303 63 61 chr2 246442484 246443042 -6813541 - L1MEc LINE L1 -5816 580 22 296 200 0 15 chr2 246443050 246443115 -6813468 - L1M4 LINE L1 -1803 4343 4280 883 182 0 33 chr2 246443116 246443297 -6813286 - AluJb SINE Alu -14 298 124 920 293 86 47 chr2 246443297 246443463 -6813120 - L1M4 LINE L1 -1875 4271 4113 5259 60 11 49 chr2 246443463 246444181 -6812402 - LTR8 LTR ERV1 0 691 1 920 293 86 47 chr2 246444181 246444832 -6811751 - L1M4 LINE L1 -2033 4113 3422 208 161 16 65 chr2 246445240 246445302 -6811281 + T-rich Low_complexity Low_complexity 2 60 0 255 301 133 41 chr2 246445359 246446505 -6810078 - L1M4 LINE L1 -2752 3394 2144 237 65 0 0 chr2 246446859 246446890 -6809693 + (CA)n Simple_repeat Simple_repeat 2 32 0 428 283 60 16 chr2 246447099 246447283 -6809300 - LTR67 LTR ERVL -8 549 358 2219 176 16 69 chr2 246447370 246447875 -6808708 - L1MC3 LINE L1 -606 7179 6702 2347 121 19 38 chr2 246448062 246448433 -6808150 - THE1B LTR MaLR 0 364 1 323 294 20 20 chr2 246449797 246449899 -6806684 + MER5B DNA MER1_type 4 105 -73 557 240 40 8 chr2 246449909 246450034 -6806549 + MER91A DNA MER1_type 1 129 -67 2316 100 0 0 chr2 246450772 246451081 -6805502 - AluSx SINE Alu -3 309 1 210 120 27 53 chr2 246451381 246451456 -6805127 + GA-rich Low_complexity Low_complexity 1 73 0 2221 68 14 7 chr2 246451459 246451752 -6804831 - AluSg1 SINE Alu -14 295 1 2121 122 0 0 chr2 246452166 246452469 -6804114 - AluSx SINE Alu -9 303 1 278 317 30 20 chr2 246452683 246452784 -6803799 - L2 LINE L2 -23 3249 3148 453 229 37 0 chr2 246453500 246453609 -6802974 + MER81 DNA DNA 1 113 -1 266 353 69 18 chr2 246454390 246454608 -6801975 - L2 LINE L2 -1031 2283 2055 1393 165 0 39 chr2 246454671 246454931 -6801652 - AluJb SINE Alu -50 262 13 233 310 161 11 chr2 246455425 246455512 -6801071 - L2 LINE L2 -4 3268 3169 2364 75 0 3 chr2 246455877 246456183 -6800400 + AluY SINE Alu 1 305 -6 310 278 82 113 chr2 246457321 246457601 -6798982 + L1M2 LINE L1 1686 1825 -1384 1494 167 28 44 chr2 246457601 246457918 -6798665 + AluJo SINE Alu 1 312 0 310 278 82 113 chr2 246457918 246458093 -6798490 + L1M2 LINE L1 1825 2004 -1205 7032 120 15 22 chr2 246459082 246460161 -6796422 - MER11C LTR ERVK 0 1071 1 918 266 28 0 chr2 246460845 246461063 -6795520 + MER58A DNA MER1_type 1 224 0 521 296 114 29 chr2 246461096 246461404 -6795179 - LTR16C LTR ERVL -47 444 111 264 350 113 30 chr2 246461726 246461992 -6794591 + L2 LINE L2 3026 3313 0 1783 41 0 9 chr2 246462725 246462944 -6793639 - AluY SINE Alu -9 302 86 2022 139 7 0 chr2 246463218 246463527 -6793056 - AluSx SINE Alu -1 311 1 1318 191 62 19 chr2 246464051 246464427 -6792156 - L1MDa LINE L1 -3661 2879 2484 220 284 194 45 chr2 246464445 246464579 -6792004 - MIR SINE MIR -40 222 69 1828 143 190 14 chr2 246464579 246464943 -6791640 + MSTA LTR MaLR 1 428 0 463 274 117 51 chr2 246465211 246465623 -6790960 - LTR37B LTR ERV1 -24 444 6 1558 115 0 17 chr2 246466027 246466261 -6790322 + MER30 DNA MER1_type 1 230 0 2563 158 32 23 chr2 246466684 246467159 -6789424 - LTR8A LTR ERV1 0 727 249 587 177 0 0 chr2 246467157 246467253 -6789330 - LTR8A LTR ERV1 -383 344 249 * 1727 165 95 6 chr2 246467251 246467567 -6789016 - LTR8A LTR ERV1 -383 344 1 2055 122 3 0 chr2 246468938 246469234 -6787349 - AluJb SINE Alu -15 297 1 407 254 65 22 chr2 246469361 246469499 -6787084 - MLT1K LTR MaLR -342 246 103 2148 125 0 0 chr2 246469837 246470142 -6786441 + AluSx SINE Alu 1 305 -7 1851 107 0 4 chr2 246470614 246470867 -6785716 + AluSc SINE Alu 1 252 -57 200 59 29 0 chr2 246470881 246470915 -6785668 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 3124 209 185 31 chr2 246470932 246471866 -6784717 + L1MDa LINE L1 22 1121 -5419 2365 84 3 0 chr2 246471866 246472175 -6784408 + AluSx SINE Alu 3 312 0 3124 209 185 31 chr2 246472175 246472238 -6784345 + L1MDa LINE L1 1121 1173 -5367 2347 184 28 78 chr2 246472236 246472707 -6783876 + L1MD1 LINE L1 5475 5968 -274 * 1827 147 19 7 chr2 246472707 246473014 -6783569 - AluJb SINE Alu -1 311 1 2347 184 28 78 chr2 246473014 246473047 -6783536 + L1MD1 LINE L1 5968 5950 -292 4504 138 31 30 chr2 246473047 246473825 -6782758 + MER4E LTR ERV1 1 779 0 2347 184 28 78 chr2 246473825 246473895 -6782688 + L1MD1 LINE L1 5949 6021 -221 242 294 0 40 chr2 246473912 246474089 -6782494 + GA-rich Low_complexity Low_complexity 4 173 0 * 255 296 17 40 chr2 246474085 246474261 -6782322 + (CAG)n Simple_repeat Simple_repeat 3 174 0 276 211 33 39 chr2 246474270 246474450 -6782133 + GA-rich Low_complexity Low_complexity 1 179 0 200 304 19 43 chr2 246474450 246474611 -6781972 + (CAG)n Simple_repeat Simple_repeat 3 159 0 220 217 23 51 chr2 246474735 246474910 -6781673 + GA-rich Low_complexity Low_complexity 4 173 0 * 238 294 19 38 chr2 246474817 246474977 -6781606 + (CAG)n Simple_repeat Simple_repeat 3 159 0 245 233 34 34 chr2 246475166 246475342 -6781241 + GA-rich Low_complexity Low_complexity 4 179 0 1147 202 21 4 chr2 246475406 246475649 -6780934 + L1MD1 LINE L1 5988 6234 -8 203 299 140 9 chr2 246475895 246476002 -6780581 + MIR SINE MIR 69 189 -73 392 325 63 37 chr2 246476139 246476398 -6780185 - L1M4c LINE L1 -4207 2356 2105 2008 133 0 0 chr2 246476398 246476684 -6779899 - AluSx SINE Alu -26 286 1 392 325 63 37 chr2 246476684 246476875 -6779708 - L1M4c LINE L1 -4458 2105 1921 738 195 0 0 chr2 246476875 246477003 -6779580 - FLAM_A SINE Alu -1 132 5 392 325 63 37 chr2 246477003 246477228 -6779355 - L1M4c LINE L1 -4642 1921 1516 255 61 0 0 chr2 246477294 246477327 -6779256 + (CA)n Simple_repeat Simple_repeat 2 34 0 1893 98 0 66 chr2 246478043 246478378 -6778205 - AluSx SINE Alu 0 315 1 2050 147 0 0 chr2 246478645 246478957 -6777626 - AluSx SINE Alu 0 312 1 250 305 55 49 chr2 246479220 246479394 -6777189 + MIR SINE MIR 17 202 -60 378 331 38 6 chr2 246479911 246480071 -6776512 + L2 LINE L2 1851 2015 -1299 1848 134 10 3 chr2 246480212 246480504 -6776079 + AluJo SINE Alu 2 295 -17 2084 132 0 0 chr2 246480706 246481009 -6775574 + AluSx SINE Alu 3 305 -7 340 383 155 4 chr2 246482028 246482292 -6774291 - L3 LINE CR1 -2 1575 1272 312 250 20 115 chr2 246482303 246482547 -6774036 - LTR41 LTR ERVL -22 751 531 2412 74 3 0 chr2 246482590 246482899 -6773684 + AluY SINE Alu 1 310 -1 2276 127 39 14 chr2 246483041 246483396 -6773187 - THE1B LTR MaLR 0 364 1 10602 107 50 6 chr2 246483396 246484910 -6771673 - THE1B-int LTR MaLR 0 1580 1 2211 134 40 3 chr2 246484911 246485261 -6771322 - THE1B LTR MaLR -1 363 1 452 244 0 39 chr2 246485319 246485446 -6771137 - LTR41 LTR ERVL -628 145 24 188 325 16 63 chr2 246485709 246485835 -6770748 + L2 LINE L2 2227 2346 -968 1536 132 0 0 chr2 246486275 246486495 -6770088 + AluSq SINE Alu 1 220 -93 225 297 62 62 chr2 246487240 246487385 -6769198 + MIR SINE MIR 48 192 -70 3844 99 6 88 chr2 246487543 246488180 -6768403 + MER4A LTR ERV1 1 585 -79 2730 176 86 2 chr2 246488465 246488989 -6767594 - L1MB5 LINE L1 -8 6166 5599 2395 74 0 3 chr2 246489975 246490286 -6766297 + AluY SINE Alu 1 310 -1 26 30 0 0 chr2 246490370 246490403 -6766180 + AT_rich Low_complexity Low_complexity 1 33 0 204 43 64 64 chr2 246490556 246490603 -6765980 + (TTATA)n Simple_repeat Simple_repeat 1 47 0 411 279 137 11 chr2 246490603 246490793 -6765790 - L1ME LINE L1 -395 5726 5513 399 304 84 59 chr2 246491002 246491443 -6765140 - L1ME LINE L1 -822 5324 4873 573 249 96 0 chr2 246491546 246491775 -6764808 + MER90 LTR ERV1 1 251 -324 3231 176 14 61 chr2 246493074 246493796 -6762787 + LTR8 LTR ERV1 1 688 -3 296 290 107 47 chr2 246493915 246494084 -6762499 + LTR16C LTR ERVL 313 491 0 2273 103 0 3 chr2 246495705 246496017 -6760566 + AluSq SINE Alu 1 311 -2 598 119 37 0 chr2 246496169 246496303 -6760280 + (TG)n Simple_repeat Simple_repeat 2 140 0 1966 120 0 4 chr2 246497678 246497954 -6758629 - AluSx SINE Alu -37 275 1 1463 246 135 8 chr2 246498583 246499100 -6757483 + MER90 LTR ERV1 31 613 -1 183 80 0 0 chr2 246499490 246499515 -6757068 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 718 169 39 23 chr2 246499630 246499760 -6756823 + FLAM_C SINE Alu 1 132 -1 2096 142 38 11 chr2 246499848 246500011 -6756572 + L1MA9 LINE L1 5932 6089 -223 2846 120 16 12 chr2 246500011 246500437 -6756146 + MSTA LTR MaLR 1 428 0 2096 142 38 11 chr2 246500437 246500639 -6755944 + L1MA9 LINE L1 6089 6307 -5 291 386 51 0 chr2 246502725 246502883 -6753700 + MIR SINE MIR 1 166 -96 1974 136 10 0 chr2 246502971 246503265 -6753318 + AluSx SINE Alu 1 297 -15 192 316 118 37 chr2 246503445 246503581 -6753002 - L2 LINE L2 -2 3311 3165 243 251 31 80 chr2 246503700 246503863 -6752720 - L1ME LINE L1 -343 5778 5624 234 240 10 42 chr2 246503951 246504047 -6752536 - L1ME LINE L1 -681 5440 5348 195 402 0 11 chr2 246504428 246504520 -6752063 - MER5B DNA MER1_type -85 93 3 322 314 108 15 chr2 246504523 246504727 -6751856 + L3 LINE CR1 790 1012 -565 472 353 6 12 chr2 246504775 246504945 -6751638 + L3 LINE CR1 1319 1487 -90 2305 97 0 3 chr2 246505005 246505315 -6751268 - AluSg SINE Alu -1 309 1 183 326 0 0 chr2 246505437 246505486 -6751097 - L3 LINE CR1 -1317 260 212 2249 89 7 0 chr2 246506180 246506484 -6750099 + AluSp SINE Alu 5 310 -3 1791 203 34 47 chr2 246506694 246507163 -6749420 + MLT1C LTR MaLR 5 467 0 492 321 72 28 chr2 246509476 246509865 -6746718 - MLT1I LTR MaLR -3 406 1 211 361 0 0 chr2 246509991 246510052 -6746531 - L2 LINE L2 -58 3214 3154 1060 159 0 0 chr2 246510149 246510319 -6746264 - AluSg/x SINE Alu -8 304 135 693 178 0 0 chr2 246510531 246510688 -6745895 + (TG)n Simple_repeat Simple_repeat 2 158 0 246 177 16 32 chr2 246710714 246710776 -6545807 + GA-rich Low_complexity Low_complexity 2 62 0 327 164 66 0 chr2 246711188 246711249 -6545334 + MLT1K LTR MaLR 511 575 -13 2261 90 0 0 chr2 246711975 246712274 -6544309 - AluY SINE Alu -12 299 1 197 194 0 0 chr2 246712365 246712401 -6544182 - L3 LINE CR1 -14 1563 1528 997 114 0 0 chr2 246712472 246712604 -6543979 + MER83 LTR ERV1 1 132 -316 201 211 92 55 chr2 246712707 246712816 -6543767 + MER5A DNA MER1_type 26 138 -51 271 253 38 0 chr2 246712722 246712801 -6543782 - MER5B DNA MER1_type -33 145 64 213 240 40 0 chr2 246712855 246712905 -6543678 + MER5B DNA MER1_type 127 178 0 660 217 64 6 chr2 246713009 246713166 -6543417 - MER5A DNA MER1_type -23 166 1 294 358 40 11 chr2 246713169 246713345 -6543238 + MIR SINE MIR 12 192 -70 2346 76 0 0 chr2 246713612 246713913 -6542670 - AluSc SINE Alu -8 301 1 904 217 42 0 chr2 246715190 246715379 -6541204 + MIR SINE MIR 40 236 -26 2184 103 0 0 chr2 246715516 246715817 -6540766 - AluSc SINE Alu 0 309 9 542 233 17 9 chr2 246716751 246716867 -6539716 + MER58A DNA MER1_type 3 119 0 3345 108 54 39 chr2 246718489 246719008 -6537575 - MER1A DNA MER1_type 0 527 1 332 312 18 0 chr2 246719019 246719128 -6537455 + MIR SINE MIR 21 131 -131 23 0 0 0 chr2 246721705 246721728 -6534855 + AT_rich Low_complexity Low_complexity 1 23 0 279 173 0 0 chr2 246721780 246721832 -6534751 + (TG)n Simple_repeat Simple_repeat 1 52 0 434 249 140 21 chr2 246722121 246722314 -6534269 + MIR SINE MIR 45 260 -2 245 280 105 21 chr2 246722336 246722479 -6534104 + MIR3 SINE MIR 5 159 -49 234 0 0 0 chr2 246723097 246723123 -6533460 + (CA)n Simple_repeat Simple_repeat 1 26 0 2867 64 3 0 chr2 246723124 246723481 -6533102 + L1PB1 LINE L1 5793 6150 -1 409 165 289 0 chr2 246723513 246723610 -6532973 + MLT1C LTR MaLR 221 345 -122 339 225 34 11 chr2 246723609 246723698 -6532885 + MLT1C LTR MaLR 300 390 0 * 191 183 0 155 chr2 246724637 246724667 -6531916 - MIR3 SINE MIR -15 193 179 2016 105 35 0 chr2 246724667 246724953 -6531630 + AluSc SINE Alu 1 296 -13 191 183 0 155 chr2 246724953 246724993 -6531590 - MIR3 SINE MIR -29 179 134 353 64 0 3 chr2 246725063 246725112 -6531471 - MLT2A2 LTR ERVL -4 449 408 * 3438 69 0 20 chr2 246725110 246725557 -6531026 - MLT2A1 LTR ERVL -6 438 1 551 218 160 75 chr2 246725629 246725891 -6530692 + MLT1H1 LTR MaLR 1 298 -257 2108 181 71 5 chr2 246725891 246726283 -6530300 + MER47B DNA MER2_type 1 418 0 551 218 160 75 chr2 246726283 246726351 -6530232 + MLT1H1 LTR MaLR 298 359 -196 254 154 0 0 chr2 246726377 246726416 -6530167 + MLT1H1 LTR MaLR 552 590 0 190 300 0 0 chr2 246726437 246726477 -6530106 - L3 LINE CR1 -6 1571 1532 499 310 118 0 chr2 246726480 246726667 -6529916 - L2 LINE L2 -5 3308 3100 438 193 0 0 chr2 246726695 246726778 -6529805 - AluJ/FRAM SINE Alu 0 312 230 24 0 0 0 chr2 246726778 246726802 -6529781 + AT_rich Low_complexity Low_complexity 1 24 0 1976 129 4 0 chr2 246726942 246727269 -6529314 - AluSg SINE Alu 0 328 1 967 293 147 46 chr2 246727397 246728137 -6528446 - L3 LINE CR1 -72 1505 691 2025 127 0 13 chr2 246728252 246728551 -6528032 + AluSx SINE Alu 1 295 -17 2498 138 5 0 chr2 246728869 246729253 -6527330 + MLT1B LTR MaLR 5 390 0 3064 127 172 2 chr2 246729692 246730220 -6526363 - LTR35 LTR ERV1 0 618 1 4571 49 2 0 chr2 246730734 246731286 -6525297 + L1PA5 LINE L1 5602 6154 0 443 143 24 0 chr2 246731818 246731902 -6524681 - L1MB8 LINE L1 0 6178 6093 234 268 28 14 chr2 246732388 246732459 -6524124 + GA-rich Low_complexity Low_complexity 5 76 0 1990 134 74 0 chr2 246732624 246732960 -6523623 + MER46B DNA MER2_type 1 236 0 2034 189 70 7 chr2 246733457 246733860 -6522723 - MSTA LTR MaLR 0 428 1 501 287 46 35 chr2 246734107 246734281 -6522302 - MER45A DNA AcHobo -2 176 1 224 149 21 0 chr2 246735892 246735939 -6520644 + GA-rich Low_complexity Low_complexity 2 49 0 9411 85 1 9 chr2 246736338 246737399 -6519184 - L1P LINE L1 -1198 4948 3898 2814 22 0 0 chr2 246737399 246737717 -6518866 - AluYb8 SINE Alu 0 318 1 9411 85 1 9 chr2 246737717 246737942 -6518641 - L1P LINE L1 -2248 3898 3673 1935 145 6 42 chr2 246737942 246738274 -6518309 + MER57B LTR ERV1 88 407 -27 367 287 64 32 chr2 246738293 246738450 -6518133 + MIR3 SINE MIR 47 208 0 279 350 62 44 chr2 246738467 246738627 -6517956 + L3b LINE CR1 1364 1526 -57 2006 196 48 17 chr2 246739066 246739485 -6517098 + MSTB1 LTR MaLR 1 432 0 233 70 0 70 chr2 246739870 246739927 -6516656 + (TCC)n Simple_repeat Simple_repeat 1 53 0 1121 45 0 0 chr2 246740264 246740398 -6516185 + AluY SINE Alu 1 134 -177 2246 64 14 0 chr2 246740398 246740695 -6515888 + AluY SINE Alu 1 301 -10 1890 125 4 4 chr2 246742441 246742746 -6513837 + AluSx SINE Alu 1 305 0 585 203 65 106 chr2 246743609 246743826 -6512757 - MER63A DNA MER1_type -2 208 1 2395 110 8 8 chr2 246744126 246744481 -6512102 - THE1A LTR MaLR 0 355 1 7581 37 1 1 chr2 246744504 246745656 -6510927 + L1PA5 LINE L1 5000 6151 -3 21 0 0 0 chr2 246745658 246745679 -6510904 + AT_rich Low_complexity Low_complexity 1 21 0 1088 240 41 29 chr2 246745887 246746277 -6510306 + LTR16C LTR ERVL 49 490 -1 705 226 42 52 chr2 246746542 246746830 -6509753 - L1MC5 LINE L1 -36 7925 7641 * 5932 191 20 32 chr2 246746772 246747943 -6508640 + L1MB8 LINE L1 3986 5170 -1008 1668 201 0 0 chr2 246747943 246748237 -6508346 - AluSx SINE Alu -18 294 1 5932 191 20 32 chr2 246748237 246748921 -6507662 + L1MB8 LINE L1 5170 5861 -317 1999 128 0 10 chr2 246748921 246749217 -6507366 + AluSg SINE Alu 1 293 -17 5932 191 20 32 chr2 246749217 246749522 -6507061 + L1MB8 LINE L1 5861 6118 -60 1441 94 85 0 chr2 246749522 246749734 -6506849 - MER30 DNA MER1_type 0 230 1 5932 191 20 32 chr2 246749734 246749793 -6506790 + L1MB8 LINE L1 6118 6176 -2 1273 188 59 0 chr2 246749807 246750063 -6506520 + AluJo SINE Alu 6 276 -36 486 295 7 7 chr2 246750171 246750320 -6506263 + FRAM SINE Alu 25 173 -3 1390 223 106 3 chr2 246750342 246750709 -6505874 + MLT1E2 LTR MaLR 222 626 0 1729 179 0 13 chr2 246750938 246751240 -6505343 + AluJo SINE Alu 1 298 -14 210 300 153 24 chr2 246751520 246751690 -6504893 - L2 LINE L2 -153 3119 2928 302 315 55 36 chr2 246752094 246752259 -6504324 - MIR SINE MIR -15 247 80 1999 87 7 43 chr2 246752615 246752937 -6503646 - AluSx SINE Alu 0 312 1 281 266 93 29 chr2 246753246 246753385 -6503198 - L1MC/D LINE L1 -1959 5849 5702 758 42 0 0 chr2 246753393 246753489 -6503094 + L1PA6 LINE L1 6059 6154 0 1784 147 3 39 chr2 246753549 246753856 -6502727 + AluJb SINE Alu 1 296 -16 951 321 79 51 chr2 246753889 246754751 -6501832 - L1M4 LINE L1 -2828 3318 2433 391 204 138 0 chr2 246755575 246755727 -6500856 - L1MC/D LINE L1 -2381 5427 5255 273 309 160 22 chr2 246757000 246757181 -6499402 + MIR SINE MIR 21 226 -36 27 0 0 0 chr2 246757421 246757448 -6499135 + AT_rich Low_complexity Low_complexity 1 27 0 403 366 86 18 chr2 246757763 246758042 -6498541 - L2 LINE L2 -9 3263 2966 3630 188 74 38 chr2 246758078 246758890 -6497693 - MER21B LTR ERV1 -4 859 19 1288 128 5 5 chr2 246758960 246759156 -6497427 - AluJb SINE Alu -32 280 85 200 393 107 13 chr2 246759854 246760004 -6496579 + MIR SINE MIR 98 261 -1 1843 140 0 7 chr2 246760042 246760378 -6496205 + AluJb SINE Alu 1 334 0 1895 133 3 13 chr2 246761536 246761851 -6494732 - AluSx SINE Alu 0 312 1 257 235 0 12 chr2 246762431 246762512 -6494071 + CT-rich Low_complexity Low_complexity 3 82 0 537 256 90 13 chr2 246763864 246764020 -6492563 + MER63A DNA MER1_type 12 179 -31 535 307 117 19 chr2 246765176 246765544 -6491039 + L1ME4a LINE L1 5508 5911 -210 1952 94 30 0 chr2 246766058 246766323 -6490260 + AluSq SINE Alu 22 294 -19 231 36 0 0 chr2 246766334 246766362 -6490221 + (CAA)n Simple_repeat Simple_repeat 3 30 0 247 349 101 8 chr2 246766400 246766529 -6490054 + MIR SINE MIR 107 247 -15 32 26 0 0 chr2 246766999 246767038 -6489545 + AT_rich Low_complexity Low_complexity 1 39 0 21 36 0 0 chr2 246767136 246767164 -6489419 + AT_rich Low_complexity Low_complexity 1 28 0 871 137 65 13 chr2 246767345 246767498 -6489085 + MER65A LTR ERV1 1 161 -284 33 18 0 36 chr2 246768303 246768320 -6488263 + AT_rich Low_complexity Low_complexity 1 17 -36 1608 172 21 7 chr2 246768320 246768611 -6487972 + AluJb SINE Alu 3 297 -15 33 18 0 36 chr2 246768611 246768648 -6487935 + AT_rich Low_complexity Low_complexity 17 53 0 416 288 132 58 chr2 246768939 246769418 -6487165 - LTR33 LTR ERVL 0 521 8 808 160 0 21 chr2 246769454 246769598 -6486985 + FLAM_C SINE Alu 3 143 0 754 235 90 10 chr2 246769618 246769818 -6486765 - MER20 DNA MER1_type -3 216 1 295 292 99 29 chr2 246770225 246770396 -6486187 + L1MEd LINE L1 376 558 -5561 1318 140 77 103 chr2 246770455 246770535 -6486048 + L1MA9 LINE L1 5973 6054 -258 1834 103 74 4 chr2 246770535 246770806 -6485777 + AluSq SINE Alu 1 290 -23 1318 140 77 103 chr2 246770806 246770851 -6485732 + L1MA9 LINE L1 6054 6099 -213 1389 381 77 3 chr2 246770851 246771200 -6485383 - THE1C LTR MaLR 0 375 1 1318 140 77 103 chr2 246771200 246771422 -6485161 + L1MA9 LINE L1 6099 6312 0 2048 114 0 32 chr2 246771713 246772021 -6484562 + AluSq SINE Alu 1 298 -15 317 343 101 0 chr2 246772453 246772631 -6483952 - L2 LINE L2 0 3313 3118 558 158 234 6 chr2 246773270 246773428 -6483155 + MLT1D LTR MaLR 310 503 -2 1589 184 7 7 chr2 246773435 246773734 -6482849 - AluJb SINE Alu -1 311 13 371 274 230 28 chr2 246773766 246774123 -6482460 - L2 LINE L2 -24 3289 2861 4246 72 24 0 chr2 246774725 246775266 -6481317 + MER41A LTR ERV1 1 554 0 629 167 9 0 chr2 246775814 246775922 -6480661 + AluSg/x SINE Alu 189 297 -12 253 280 110 0 chr2 246775924 246776042 -6480541 + L1ME LINE L1 5696 5826 -295 580 273 7 26 chr2 246776107 246776261 -6480322 - MIR SINE MIR -79 183 33 865 169 68 34 chr2 246776275 246776452 -6480131 + AluJo SINE Alu 108 290 -22 244 275 12 0 chr2 246776457 246776537 -6480046 + L1ME LINE L1 5840 5920 -201 261 250 66 0 chr2 246777057 246777133 -6479450 - MER5B DNA MER1_type -96 82 2 735 143 134 78 chr2 246778790 246779007 -6477576 + MLT1C LTR MaLR 6 234 -233 2024 87 7 18 chr2 246779007 246779293 -6477290 + L1P5 LINE L1 5396 5678 -473 1076 116 29 77 chr2 246779393 246779513 -6477070 + MER83 LTR ERV1 252 359 -89 1706 121 0 12 chr2 246779513 246779769 -6476814 - AluSx SINE Alu -17 295 43 1076 116 29 77 chr2 246779769 246779855 -6476728 + MER83 LTR ERV1 359 448 0 23 0 0 0 chr2 246780435 246780458 -6476125 + AT_rich Low_complexity Low_complexity 1 23 0 189 74 0 0 chr2 246780514 246780541 -6476042 + (CAAAAA)n Simple_repeat Simple_repeat 3 29 0 180 316 79 26 chr2 246780628 246780704 -6475879 + MIR3 SINE MIR 84 163 -45 3118 104 14 0 chr2 246780957 246781379 -6475204 + MSTA LTR MaLR 1 428 0 185 360 72 9 chr2 246781440 246781551 -6475032 - MIR SINE MIR -25 237 120 328 315 124 39 chr2 246781836 246782093 -6474490 + LTR16A LTR ERVL 12 290 -160 352 257 40 0 chr2 246782122 246782223 -6474360 + HERV16 LTR ERVL 1220 1324 -3672 244 200 168 40 chr2 246782247 246782352 -6474231 + LTR37A LTR ERV1 8 128 -298 3052 93 114 38 chr2 246782352 246782915 -6473668 + MER4B LTR ERV1 2 766 0 399 176 37 81 chr2 246782928 246783064 -6473519 + MER57-int LTR ERV1 4604 4733 -203 2216 97 0 0 chr2 246783262 246783561 -6473022 - AluSg SINE Alu -11 299 1 267 269 45 0 chr2 246783701 246783768 -6472815 + MER57-int LTR ERV1 6898 6967 -570 527 301 88 36 chr2 246784086 246784392 -6472191 + MER93a LTR ERV1 64 385 -17 2214 112 0 6 chr2 246784843 246785157 -6471426 - AluSx SINE Alu 0 312 1 3236 219 151 88 chr2 246786337 246787972 -6468611 - L1MC4a LINE L1 -697 7111 5373 461 198 28 0 chr2 246787951 246788057 -6468526 - L1MC4a LINE L1 -1630 4516 4408 * 299 250 54 18 chr2 246788479 246788591 -6467992 - L1M4 LINE L1 -1555 4591 4476 559 116 63 0 chr2 246788733 246788828 -6467755 - L1MA10 LINE L1 0 6334 6234 1972 84 0 0 chr2 246788844 246789106 -6467477 - AluSg SINE Alu -14 296 35 679 295 68 30 chr2 246789106 246789975 -6466608 - L1MC/D LINE L1 -751 5395 4549 2348 54 0 3 chr2 246790087 246790383 -6466200 + AluY SINE Alu 1 295 -16 405 241 81 51 chr2 246790497 246790733 -6465850 + HAL1 LINE L1 2264 2506 -1 1798 226 139 25 chr2 246791600 246792162 -6464421 + MLT1E2 LTR MaLR 1 626 0 342 250 48 29 chr2 246792166 246792270 -6464313 + MER117 DNA MER1_type 88 193 -4 264 362 62 27 chr2 246793529 246793902 -6462681 + HAL1b LINE L1 331 716 -632 320 282 171 64 chr2 246794183 246794495 -6462088 + L1M4c LINE L1 2198 2542 -3840 307 231 0 46 chr2 246794522 246794587 -6461996 - L1MC4 LINE L1 -1340 6702 6641 2239 93 3 3 chr2 246794668 246794969 -6461614 + AluSc SINE Alu 1 301 -8 184 305 133 9 chr2 246795220 246795325 -6461258 - L2 LINE L2 -1 3312 3195 744 225 51 81 chr2 246795416 246795490 -6461093 - MER45C DNA AcHobo -628 953 878 1683 166 3 7 chr2 246795490 246795773 -6460810 + AluJo SINE Alu 1 282 -30 744 225 51 81 chr2 246795773 246795934 -6460649 - MER45C DNA AcHobo -703 878 725 1111 228 13 13 chr2 246796046 246796278 -6460305 - MER45C DNA AcHobo -721 232 1 1795 148 66 38 chr2 246796657 246797022 -6459561 - THE1C LTR MaLR 0 375 1 505 211 11 0 chr2 246797222 246797312 -6459271 + L2 LINE L2 3220 3310 -3 2310 106 0 0 chr2 246797880 246798192 -6458391 - AluSx SINE Alu 0 312 1 325 301 96 14 chr2 246798404 246798550 -6458033 - MIR SINE MIR -85 177 20 186 167 0 0 chr2 246798955 246798991 -6457592 + (TG)n Simple_repeat Simple_repeat 1 36 0 348 351 52 73 chr2 246799955 246800379 -6456204 + L2 LINE L2 2857 3271 -1 2081 94 11 0 chr2 246800751 246801059 -6455524 + AluSg SINE Alu 1 311 0 607 255 128 0 chr2 246801224 246801412 -6455171 + MER58C DNA MER1_type 1 212 -3 484 331 65 7 chr2 246801492 246801646 -6454937 + MIR SINE MIR 8 170 -92 1140 255 162 49 chr2 246801646 246802055 -6454528 + LTR24B LTR ERV1 1 484 -151 183 42 0 0 chr2 246802055 246802079 -6454504 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1140 255 162 49 chr2 246802079 246802206 -6454377 + LTR24B LTR ERV1 484 595 -40 258 313 7 42 chr2 246802845 246802989 -6453594 - HERV16 LTR ERVL -303 4693 4555 390 291 44 6 chr2 246803258 246803416 -6453167 - LTR16B LTR ERVL -87 377 214 302 323 8 15 chr2 246803436 246803566 -6453017 - LTR16B LTR ERVL -74 390 262 320 143 13 39 chr2 246803788 246803865 -6452718 - L1MA5 LINE L1 -5 6295 6221 747 167 46 23 chr2 246803865 246804039 -6452544 + L1MA4 LINE L1 5915 6092 -208 956 261 33 82 chr2 246804509 246804810 -6451773 - LTR16B LTR ERVL -2 462 193 2581 159 66 8 chr2 246804810 246805294 -6451289 + LTR64 LTR ERVK 2 513 0 956 261 33 82 chr2 246805294 246805478 -6451105 - LTR16B LTR ERVL -271 193 1 271 388 41 0 chr2 246805983 246806153 -6450430 - MIR SINE MIR -19 243 67 1170 266 59 18 chr2 246806424 246806815 -6449768 - MLT1C LTR MaLR 0 467 61 423 258 17 0 chr2 246809780 246809900 -6446683 - L1ME3A LINE L1 -9 6161 6040 658 146 9 0 chr2 246809916 246810026 -6446557 + L1M1 LINE L1 5638 5748 -555 2083 68 75 11 chr2 246812775 246813054 -6443529 + AluY SINE Alu 1 297 -14 3925 200 47 18 chr2 246813068 246813937 -6442646 - MER63C DNA MER1_type -34 896 3 2451 73 3 3 chr2 246814037 246814339 -6442244 + AluY SINE Alu 3 304 -7 189 0 0 0 chr2 246814516 246814537 -6442046 + (GGAGA)n Simple_repeat Simple_repeat 2 22 0 662 203 33 6 chr2 246814537 246814703 -6441880 - L1P5 LINE L1 -700 5454 5285 665 322 39 18 chr2 246815501 246815869 -6440714 - L1MC4a LINE L1 -298 5823 5473 290 132 19 0 chr2 246816435 246816488 -6440095 + CT-rich Low_complexity Low_complexity 4 57 0 334 280 36 36 chr2 246816494 246816662 -6439921 - L1MC5 LINE L1 -167 7794 7627 242 264 93 39 chr2 246817801 246817930 -6438653 + MIR SINE MIR 91 226 -36 306 262 90 8 chr2 246818396 246818518 -6438065 + MLT1I LTR MaLR 43 174 -235 641 251 30 6 chr2 246820175 246820342 -6436241 - LTR16B LTR ERVL -284 180 10 2277 209 93 38 chr2 246820477 246821036 -6435547 + MLT1E LTR MaLR 1 590 -3 2151 127 10 3 chr2 246821621 246821921 -6434662 + AluSx SINE Alu 1 302 -10 834 106 14 7 chr2 246822717 246822859 -6433724 + (TTCC)n Simple_repeat Simple_repeat 4 146 0 5692 167 22 1 chr2 246823024 246824019 -6432564 - L1MC2 LINE L1 -1 6343 5328 3779 277 76 25 chr2 246824010 246825884 -6430699 - L1MC2 LINE L1 -1194 4952 2982 * 236 237 0 53 chr2 246825877 246825953 -6430630 - L1MC/D LINE L1 -1923 5885 5814 * 4875 165 45 94 chr2 246825978 246826079 -6430504 - L1MC3 LINE L1 -1 7784 7680 1397 252 58 58 chr2 246826079 246826599 -6429984 - MLT2B1 LTR ERVL 0 520 1 4875 165 45 94 chr2 246826599 246826865 -6429718 - L1MC3 LINE L1 -105 7680 7403 2160 99 40 13 chr2 246826865 246827169 -6429414 - AluSx SINE Alu 0 312 1 4875 165 45 94 chr2 246827169 246827544 -6429039 - L1MC3 LINE L1 -382 7403 7120 2219 110 3 0 chr2 246827544 246827836 -6428747 - AluSp SINE Alu -16 297 5 4875 165 45 94 chr2 246827836 246828300 -6428283 - L1MC3 LINE L1 -665 7120 6635 1073 187 28 71 chr2 246828302 246828585 -6427998 - L1MC/D LINE L1 -1984 5824 5554 402 261 17 26 chr2 246828663 246828778 -6427805 + MLT2B1 LTR ERVL 1 114 -406 668 179 0 27 chr2 246828781 246828893 -6427690 - L1MC/D LINE L1 -2258 5550 5442 26 0 0 0 chr2 246829048 246829074 -6427509 + AT_rich Low_complexity Low_complexity 1 26 0 1827 172 0 0 chr2 246830701 246830980 -6425603 + AluSx SINE Alu 1 279 -33 180 77 0 0 chr2 246830987 246831013 -6425570 + (CAA)n Simple_repeat Simple_repeat 2 27 0 306 344 33 7 chr2 246831921 246832072 -6424511 - MIR SINE MIR -65 197 43 439 195 12 0 chr2 246832090 246832172 -6424411 + MLT1B LTR MaLR 1 83 -307 196 205 72 24 chr2 246832757 246832840 -6423743 - L2 LINE L2 -290 2982 2896 240 309 102 40 chr2 246832895 246833299 -6423284 - L2 LINE L2 -1549 1765 1337 223 226 86 43 chr2 246834273 246834366 -6422217 - MIR SINE MIR -65 143 47 314 300 81 0 chr2 246834715 246834875 -6421708 - LTR33 LTR ERVL -222 299 127 1719 108 15 35 chr2 246835195 246835455 -6421128 - MER1B DNA MER1_type -23 316 62 946 257 17 8 chr2 246835452 246835689 -6420894 - MER33 DNA MER1_type -85 239 1 * 560 281 81 14 chr2 246836059 246836269 -6420314 + MIR SINE MIR 31 254 -8 2003 151 20 0 chr2 246837011 246837316 -6419267 - AluJb SINE Alu -1 311 1 304 164 0 0 chr2 246837405 246837460 -6419123 - MLT1K LTR MaLR -163 425 371 2922 235 29 5 chr2 246837887 246838516 -6418067 - MER82 DNA MER2_type -6 647 4 26 50 0 0 chr2 246838992 246839032 -6417551 + AT_rich Low_complexity Low_complexity 1 40 0 2572 51 0 0 chr2 246839623 246839919 -6416664 - AluY SINE Alu -15 296 1 216 67 0 0 chr2 246840612 246840642 -6415941 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 185 217 217 0 chr2 246840652 246840712 -6415871 - MIR SINE MIR -70 192 120 3384 224 39 45 chr2 246841728 246842129 -6414454 - MER63C DNA MER1_type -130 930 528 1703 180 9 29 chr2 246842129 246842473 -6414110 + MER1B DNA MER1_type 1 337 0 3384 224 39 45 chr2 246842473 246842719 -6413864 - MER63C DNA MER1_type -532 528 282 1994 142 0 42 chr2 246842719 246843028 -6413555 - AluSx SINE Alu -16 296 1 3384 224 39 45 chr2 246843028 246843308 -6413275 - MER63C DNA MER1_type -778 282 8 3706 108 10 56 chr2 246843492 246843799 -6412784 + MER4A LTR ERV1 1 266 -334 1871 116 4 8 chr2 246843799 246844067 -6412516 + AluSc SINE Alu 35 301 -8 3706 108 10 56 chr2 246844067 246844386 -6412197 + MER4A LTR ERV1 266 598 -2 1850 93 101 0 chr2 246844820 246845088 -6411495 - AluSq SINE Alu -18 295 1 329 228 47 74 chr2 246845749 246845898 -6410685 - L1M LINE L1 -960 5399 5255 847 247 100 27 chr2 246845951 246846251 -6410332 - L1ME3A LINE L1 -46 6124 5803 4964 63 5 12 chr2 246846259 246846905 -6409678 + L1PA10 LINE L1 5304 5944 -224 360 104 0 0 chr2 246846905 246846953 -6409630 - Alu SINE Alu -253 48 1 2122 281 54 69 chr2 246846970 246847799 -6408784 - L1MEc LINE L1 -2325 3890 3093 1427 108 5 14 chr2 246847799 246848013 -6408570 - L1PB2 LINE L1 0 6151 5940 2122 281 54 69 chr2 246848013 246848705 -6407878 - L1MEc LINE L1 -3122 3093 2392 198 0 0 0 chr2 246848705 246848727 -6407856 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 294 139 0 0 chr2 246848730 246848773 -6407810 - AluJo SINE Alu -20 280 238 1217 168 0 21 chr2 246848774 246848965 -6407618 - AluJo SINE Alu -125 187 1 704 276 74 29 chr2 246848965 246849116 -6407467 - L1MEc LINE L1 -3960 2436 2293 1870 198 48 3 chr2 246849116 246849495 -6407088 - L1MC2 LINE L1 -5 6339 5944 704 276 74 29 chr2 246849495 246849740 -6406843 - L1MEc LINE L1 -4103 2293 2006 2965 9 0 0 chr2 246849740 246850055 -6406528 - AluYb8 SINE Alu -3 315 1 704 276 74 29 chr2 246850055 246850211 -6406372 - L1MEc LINE L1 -4390 2006 1858 241 143 175 0 chr2 246850412 246850475 -6406108 + HAL1 LINE L1 1524 1597 -910 451 234 21 7 chr2 246850485 246850626 -6405957 + L1MEd LINE L1 972 1114 -5005 1998 146 32 26 chr2 246851256 246851395 -6405188 + MER2 DNA MER2_type 1 138 -207 1315 100 61 61 chr2 246851395 246851501 -6405082 - MER30 DNA MER1_type 0 230 125 2395 88 3 0 chr2 246851501 246851796 -6404787 + AluSg SINE Alu 1 296 -14 1315 100 61 61 chr2 246851796 246851919 -6404664 - MER30 DNA MER1_type -104 126 1 1998 146 32 26 chr2 246851919 246852122 -6404461 + MER2 DNA MER2_type 138 345 0 378 171 0 0 chr2 246852273 246852343 -6404240 + (CA)n Simple_repeat Simple_repeat 2 71 0 359 352 116 21 chr2 246852369 246852750 -6403833 - L1M4 LINE L1 -461 5717 5301 1367 313 89 26 chr2 246852771 246854105 -6402478 - L1M4 LINE L1 -861 5285 3868 3418 139 11 15 chr2 246854279 246854805 -6401778 + MER1A DNA MER1_type 1 524 -3 935 171 18 70 chr2 246854829 246855057 -6401526 + AluJo SINE Alu 85 300 -12 213 39 0 0 chr2 246855544 246855570 -6401013 + (CAAAA)n Simple_repeat Simple_repeat 4 29 0 261 306 124 0 chr2 246856260 246856381 -6400202 + MIR3 SINE MIR 50 185 -23 2074 107 47 7 chr2 246856617 246856917 -6399666 - AluJb SINE Alu 0 312 1 229 290 153 0 chr2 246857984 246858108 -6398475 + MIR SINE MIR 9 151 -111 912 219 40 0 chr2 246858197 246858398 -6398185 + L1MB5 LINE L1 5966 6174 0 1256 220 45 61 chr2 246858514 246858910 -6397673 + MLT1B LTR MaLR 1 390 0 273 326 0 12 chr2 246858993 246859079 -6397504 + MLT1H1 LTR MaLR 48 132 -423 699 244 91 10 chr2 246859301 246859510 -6397073 + MLT1E LTR MaLR 364 589 -4 229 252 163 68 chr2 246860386 246860711 -6395872 - L2 LINE L2 -66 3206 2851 2339 101 0 13 chr2 246861177 246861484 -6395099 + AluSp SINE Alu 1 303 -10 228 320 0 32 chr2 246911494 246911619 -6344964 - L1ME LINE L1 -287 5834 5714 358 304 57 85 chr2 246911790 246912073 -6344510 - L1ME LINE L1 -765 5381 5107 22 0 0 0 chr2 246912164 246912186 -6344397 + AT_rich Low_complexity Low_complexity 1 22 0 689 167 53 0 chr2 246912839 246912953 -6343630 + MER5A DNA MER1_type 6 125 -64 195 162 0 0 chr2 246913073 246913110 -6343473 + (CATA)n Simple_repeat Simple_repeat 4 40 0 266 187 8 115 chr2 246913163 246913305 -6343278 - L1 LINE L1 -2199 3947 3819 634 172 0 25 chr2 246913305 246913427 -6343156 - MLT1F LTR MaLR 0 542 424 1060 240 58 34 chr2 246913515 246913689 -6342894 + L1MC5 LINE L1 7302 7470 -491 1709 201 3 3 chr2 246913689 246913997 -6342586 + AluJo SINE Alu 1 308 -4 1060 240 58 34 chr2 246913997 246914238 -6342345 + L1MC5 LINE L1 7470 7727 -234 232 383 0 9 chr2 246914346 246914453 -6342130 + L2 LINE L2 2230 2335 -979 336 274 167 50 chr2 246914556 246914837 -6341746 + L2 LINE L2 2999 3312 -1 2219 68 39 0 chr2 246915562 246915843 -6340740 + AluSc SINE Alu 1 292 -17 467 283 115 5 chr2 246916104 246916295 -6340288 - L2 LINE L2 -890 2424 2213 2080 147 0 10 chr2 246916713 246917025 -6339558 + AluSx SINE Alu 1 309 -3 242 244 93 47 chr2 246917286 246917372 -6339211 - L2 LINE L2 -24 3248 3159 820 167 141 21 chr2 246917657 246917849 -6338734 + MER20 DNA MER1_type 2 216 -3 1410 17 0 29 chr2 246918135 246918310 -6338273 - L1PA4 LINE L1 0 6155 5986 335 23 0 0 chr2 246918312 246918356 -6338227 + L1PA4 LINE L1 5943 5986 -169 2182 113 3 39 chr2 246918526 246918835 -6337748 + AluSx SINE Alu 1 298 -14 264 353 22 7 chr2 246919760 246919896 -6336687 + MER5A DNA MER1_type 7 144 -45 924 79 79 0 chr2 246919936 246920063 -6336520 - MER85 DNA T2_type -2 137 1 811 110 0 0 chr2 246920348 246920457 -6336126 - AluSq SINE Alu -2 311 203 1148 97 0 0 chr2 246920457 246920602 -6335981 - AluSq SINE Alu -167 145 1 475 279 81 40 chr2 246920886 246921183 -6335400 - L1MC/D LINE L1 -2228 5580 5272 21 0 0 0 chr2 246921220 246921241 -6335342 + AT_rich Low_complexity Low_complexity 1 21 0 4126 185 27 8 chr2 246921259 246921594 -6334989 - L1MB7 LINE L1 -20 6164 5837 1521 149 72 0 chr2 246921594 246921843 -6334740 - AluJb SINE Alu -13 299 33 4126 185 27 8 chr2 246921843 246922352 -6334231 - L1MB7 LINE L1 -347 5837 5304 431 301 36 68 chr2 246922524 246922803 -6333780 - L1MB7 LINE L1 -1110 5036 4767 261 88 0 0 chr2 246923431 246923465 -6333118 + Alu SINE Alu 6 39 -261 1037 119 26 21 chr2 246923936 246924129 -6332454 + L1MB3 LINE L1 5289 5482 -701 2374 93 0 34 chr2 246924139 246924462 -6332121 + AluSx SINE Alu 1 312 0 1271 114 0 11 chr2 246924467 246924643 -6331940 + AluSg/x SINE Alu 127 300 -10 1088 190 0 0 chr2 246924647 246924821 -6331762 + FRAM SINE Alu 1 174 -2 818 168 73 0 chr2 246924830 246924967 -6331616 + FRAM SINE Alu 1 146 -30 3064 158 42 14 chr2 246924981 246925550 -6331033 + L1MB3 LINE L1 5595 6179 -4 1977 100 0 84 chr2 246925552 246925863 -6330720 - AluSx SINE Alu -16 296 12 22 35 0 0 chr2 246925874 246925903 -6330680 + AT_rich Low_complexity Low_complexity 1 29 0 198 325 92 25 chr2 246926294 246926394 -6330189 + L2 LINE L2 3186 3297 -16 219 114 0 0 chr2 246926394 246926429 -6330154 + (TTGG)n Simple_repeat Simple_repeat 1 35 0 198 325 92 25 chr2 246926429 246926448 -6330135 + L2 LINE L2 3297 3313 0 465 237 62 135 chr2 246926498 246926682 -6329901 + L1MC/D LINE L1 5540 5692 -429 2047 151 0 6 chr2 246926682 246926994 -6329589 - AluJb SINE Alu -2 310 1 465 237 62 135 chr2 246926994 246927133 -6329450 + L1MC/D LINE L1 5692 5840 -281 1048 222 16 4 chr2 246927277 246927529 -6329054 - L1MB5 LINE L1 -95 6079 5825 269 257 54 0 chr2 246927658 246927732 -6328851 + L2 LINE L2 2619 2696 -618 378 228 29 66 chr2 246927896 246928032 -6328551 + L1MC4 LINE L1 5695 5825 -1983 1113 233 45 126 chr2 246928033 246928723 -6327860 + L1MC4 LINE L1 7392 8025 -17 462 320 58 33 chr2 246929082 246929193 -6327390 + L1MC/D LINE L1 5373 5480 -2328 2148 114 7 13 chr2 246929193 246929501 -6327082 + AluSg SINE Alu 1 306 -4 462 320 58 33 chr2 246929501 246929783 -6326800 + L1MC/D LINE L1 5480 5776 -2032 27 0 0 0 chr2 246930115 246930142 -6326441 + AT_rich Low_complexity Low_complexity 1 27 0 1477 95 222 21 chr2 246930640 246930883 -6325700 + AluSg1 SINE Alu 2 293 -16 423 303 21 41 chr2 246930985 246931130 -6325453 - MER5A DNA MER1_type -5 184 43 * 442 244 8 53 chr2 246931001 246931132 -6325451 + MER5A DNA MER1_type 36 160 -29 472 175 0 14 chr2 246931297 246931440 -6325143 + (TTGG)n Simple_repeat Simple_repeat 1 141 0 1748 231 61 34 chr2 246931777 246932283 -6324300 + MLT2B1 LTR ERVL 1 520 0 261 317 69 35 chr2 246932300 246932445 -6324138 - MIR3 SINE MIR -57 151 2 232 281 67 112 chr2 246933438 246933551 -6323032 + MIR SINE MIR 66 171 -91 2211 55 44 0 chr2 246933551 246933864 -6322719 - AluY SINE Alu 0 325 1 232 281 67 112 chr2 246933864 246933927 -6322656 + MIR SINE MIR 171 235 -27 2238 98 7 0 chr2 246934639 246934926 -6321657 + AluSg SINE Alu 1 289 -21 254 235 112 51 chr2 246935013 246935111 -6321472 - MIR SINE MIR -140 122 19 1024 246 62 77 chr2 246935746 246936214 -6320369 - MLT1C LTR MaLR -4 463 3 1997 126 39 0 chr2 246936214 246936500 -6320083 - AluSx SINE Alu -15 297 1 273 303 118 8 chr2 246937206 246937325 -6319258 - MIR SINE MIR -79 183 52 2288 119 0 3 chr2 246937467 246937778 -6318805 + AluSx SINE Alu 3 312 0 208 379 68 0 chr2 246938013 246938116 -6318467 + MIR3 SINE MIR 81 190 -18 1949 202 7 46 chr2 246938130 246938561 -6318022 + MLT2D LTR ERVL 1 414 0 2409 113 0 0 chr2 246938764 246939073 -6317510 + AluSx SINE Alu 1 309 -3 279 272 19 10 chr2 246940360 246940463 -6316120 + L1ME3A LINE L1 5642 5745 -417 251 198 187 11 chr2 246940750 246940841 -6315742 + L1ME3A LINE L1 6056 6162 -8 1234 148 218 8 chr2 246940853 246941096 -6315487 + AluJo SINE Alu 1 294 -8 1799 169 10 13 chr2 246941099 246941400 -6315183 + AluJb SINE Alu 1 300 -12 189 0 0 0 chr2 246942273 246942294 -6314289 + (A)n Simple_repeat Simple_repeat 1 21 0 2401 153 55 18 chr2 246943811 246944248 -6312335 + LTR32 LTR ERVL 19 471 0 1274 108 0 0 chr2 246944461 246944619 -6311964 - AluSq SINE Alu -31 282 125 308 178 85 85 chr2 246944866 246944962 -6311621 + MER5B DNA MER1_type 8 112 -77 339 180 0 16 chr2 246944964 246945025 -6311558 - Tigger5 DNA MER2_type 0 2323 2264 216 313 0 0 chr2 246945287 246945450 -6311133 + (TAGG)n Simple_repeat Simple_repeat 3 165 0 2363 94 7 0 chr2 246947561 246947858 -6308725 - AluSq SINE Alu -14 299 1 958 321 98 4 chr2 246948355 246948844 -6307739 - L2 LINE L2 -548 2766 2232 425 232 54 107 chr2 246948849 246948994 -6307589 - L2 LINE L2 -1384 1930 1800 2060 137 0 0 chr2 246948994 246949279 -6307304 - AluSx SINE Alu -15 297 13 425 232 54 107 chr2 246949279 246949357 -6307226 - L2 LINE L2 -1514 1800 1719 399 41 0 0 chr2 246951246 246951295 -6305288 + (TCCC)n Simple_repeat Simple_repeat 4 52 0 2010 143 31 0 chr2 246952578 246952871 -6303712 + AluSx SINE Alu 1 302 -10 1607 175 48 31 chr2 246953220 246953512 -6303071 + AluJb SINE Alu 1 297 -15 245 158 22 122 chr2 246953517 246953656 -6302927 + Charlie5 DNA MER1_type 2475 2599 -13 1601 195 0 13 chr2 246954814 246955121 -6301462 + AluJb SINE Alu 10 312 0 198 315 27 72 chr2 246955266 246955377 -6301206 - MIR SINE MIR -64 144 39 1115 208 68 57 chr2 246955391 246955761 -6300822 - MLT1A2 LTR MaLR 0 467 1 1495 207 131 11 chr2 246955762 246956196 -6300387 - MLT1D LTR MaLR -19 486 1 257 333 12 0 chr2 246956197 246956281 -6300302 + MIR3 SINE MIR 101 185 -23 218 259 35 0 chr2 246956581 246956639 -6299944 - L2 LINE L2 0 3272 3213 525 214 62 81 chr2 246956884 246957136 -6299447 - LTR33 LTR ERVL -273 250 31 380 264 10 124 chr2 246957148 246957349 -6299234 + MIR3 SINE MIR 25 202 -6 2150 112 3 7 chr2 246958444 246958763 -6297820 - AluSg SINE Alu 0 318 1 2122 135 0 0 chr2 246959232 246959528 -6297055 + AluY SINE Alu 2 297 -14 2058 156 112 0 chr2 246959856 246960051 -6296532 + MSTA LTR MaLR 1 173 -255 189 0 0 0 chr2 246960051 246960072 -6296511 + (TC)n Simple_repeat Simple_repeat 2 22 0 2058 156 112 0 chr2 246960072 246960261 -6296322 + MSTA LTR MaLR 173 428 0 185 183 237 84 chr2 246961536 246961603 -6294980 - L3 LINE CR1 -5 1572 1517 2527 90 0 3 chr2 246961603 246961914 -6294669 - AluSg SINE Alu 0 310 1 185 183 237 84 chr2 246961914 246961977 -6294606 - L3 LINE CR1 -60 1517 1422 233 278 97 0 chr2 246962151 246962223 -6294360 - MLT1K LTR MaLR -1 587 509 1767 167 43 101 chr2 246962852 246963301 -6293282 + MLT1D LTR MaLR 3 418 -87 1594 195 6 25 chr2 246963301 246963619 -6292964 + AluJo SINE Alu 1 312 0 1767 167 43 101 chr2 246963619 246963703 -6292880 + MLT1D LTR MaLR 418 505 0 269 192 77 26 chr2 246963703 246963781 -6292802 + L1MA8 LINE L1 6205 6286 -5 948 149 0 0 chr2 246964549 246964697 -6291886 - FRAM SINE Alu 0 40 1 2269 122 115 23 chr2 246964697 246965089 -6291494 + MSTA LTR MaLR 1 428 0 8990 148 32 24 chr2 246965091 246966656 -6289927 + MSTA-int LTR MaLR 3 1580 0 2351 132 91 5 chr2 246966676 246967062 -6289521 + MSTA LTR MaLR 10 428 0 903 179 0 52 chr2 246967062 246967235 -6289348 - AluJo SINE Alu -143 169 6 276 331 126 6 chr2 246967872 246968047 -6288536 + MIR SINE MIR 7 202 -60 302 274 41 0 chr2 246968429 246968502 -6288081 - L1ME4a LINE L1 -3 6118 6043 398 268 51 36 chr2 246969462 246969600 -6286983 + MIR SINE MIR 53 192 -70 1510 134 32 53 chr2 246969730 246970014 -6286569 + AluSg SINE Alu 1 278 -32 309 135 0 0 chr2 246970014 246970066 -6286517 + (GA)n Simple_repeat Simple_repeat 1 52 0 1623 136 91 0 chr2 246970356 246970620 -6285963 + AluSx SINE Alu 2 289 -23 32 0 0 0 chr2 246970620 246970652 -6285931 + AT_rich Low_complexity Low_complexity 1 32 0 1929 130 13 3 chr2 246971053 246971360 -6285223 + AluSx SINE Alu 1 310 -2 505 174 0 17 chr2 246971498 246971613 -6284970 + CT-rich Low_complexity Low_complexity 3 115 0 26 23 0 23 chr2 246972151 246972171 -6284412 + AT_rich Low_complexity Low_complexity 1 20 -23 1946 134 0 0 chr2 246972171 246972454 -6284129 + AluSx SINE Alu 3 285 -27 26 23 0 23 chr2 246972454 246972477 -6284106 + AT_rich Low_complexity Low_complexity 20 43 0 207 0 0 0 chr2 246972634 246972657 -6283926 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 249 129 387 0 chr2 246972689 246972751 -6283832 - MLT1I LTR MaLR 0 409 324 452 279 73 0 chr2 246972802 246972938 -6283645 - MLT1J2 LTR MaLR -234 216 71 1702 137 0 18 chr2 246973110 246973388 -6283195 + AluJb SINE Alu 1 273 -39 247 82 82 0 chr2 246973391 246973440 -6283143 + GA-rich Low_complexity Low_complexity 3 55 0 272 362 95 9 chr2 246973457 246973674 -6282909 - MIR SINE MIR -11 251 18 1985 163 132 0 chr2 246973721 246974070 -6282513 + MSTB LTR MaLR 30 424 -2 653 203 25 0 chr2 246974788 246974906 -6281677 + FLAM_A SINE Alu 1 121 -12 209 351 103 49 chr2 246976309 246976676 -6279907 - L2 LINE L2 -5 3267 2881 233 57 29 0 chr2 246976731 246976766 -6279817 + (TTTC)n Simple_repeat Simple_repeat 2 37 0 978 104 0 21 chr2 246976778 246976793 -6279790 - AluSc SINE Alu -15 294 280 3488 181 22 9 chr2 246976793 246976958 -6279625 - L1MB7 LINE L1 0 6184 6023 3287 70 18 11 chr2 246976958 246977399 -6279184 - MLT2A1 LTR ERVL 0 444 1 3488 181 22 9 chr2 246977399 246977920 -6278663 - L1MB7 LINE L1 -161 6023 5489 342 0 0 0 chr2 246977921 246977959 -6278624 + (TTA)n Simple_repeat Simple_repeat 2 39 0 978 104 0 21 chr2 246977959 246978085 -6278498 - AluSc SINE Alu -28 281 154 189 0 0 0 chr2 246978091 246978112 -6278471 + (TTA)n Simple_repeat Simple_repeat 1 21 0 476 196 11 0 chr2 246978112 246978204 -6278379 - L1MB7 LINE L1 -708 5470 5378 467 308 64 23 chr2 246978509 246978681 -6277902 + MIR SINE MIR 20 198 -64 1730 161 46 60 chr2 246979748 246980114 -6276469 + MLT1A2 LTR MaLR 1 361 -13 1639 181 3 17 chr2 246980483 246980776 -6275807 + AluJo SINE Alu 1 289 -23 477 322 57 0 chr2 246981574 246981751 -6274832 - MIR3 SINE MIR -14 194 8 187 290 58 51 chr2 246982267 246982405 -6274178 - L2 LINE L2 -8 3305 3167 2130 121 0 0 chr2 246982629 246982936 -6273647 - AluSx SINE Alu -5 307 1 1613 147 20 38 chr2 246983954 246984247 -6272336 + AluJb SINE Alu 5 292 -20 607 237 69 33 chr2 246984350 246984418 -6272165 + MER112 DNA MER1_type 1 65 -191 261 98 0 0 chr2 246984418 246984459 -6272124 + (CA)n Simple_repeat Simple_repeat 2 42 0 607 237 69 33 chr2 246984459 246984544 -6272039 + MER112 DNA MER1_type 65 145 -111 1964 112 0 0 chr2 246984544 246984820 -6271763 - AluSx SINE Alu -8 304 29 607 237 69 33 chr2 246984820 246984910 -6271673 + MER112 DNA MER1_type 145 254 -2 325 67 250 0 chr2 246985159 246985219 -6271364 + AluJ/FRAM SINE Alu 224 298 -4 14422 115 51 40 chr2 246985238 246987458 -6269125 + Tigger1 DNA MER2_type 32 2281 -137 1883 147 0 0 chr2 246987458 246987743 -6268840 - AluSx SINE Alu -23 289 5 14422 115 51 40 chr2 246987743 246987883 -6268700 + Tigger1 DNA MER2_type 2281 2418 0 1446 210 45 25 chr2 246987888 246988248 -6268335 + L1ME2 LINE L1 5809 6333 -1 1440 201 23 13 chr2 246988374 246988683 -6267900 + AluJb SINE Alu 1 312 0 495 48 0 0 chr2 246988693 246988755 -6267828 + (GGAA)n Simple_repeat Simple_repeat 3 64 0 399 268 52 80 chr2 246991387 246991459 -6265124 + L1ME4a LINE L1 5366 5438 -683 2077 131 0 0 chr2 246991459 246991756 -6264827 + AluSx SINE Alu 1 297 -15 399 268 52 80 chr2 246991756 246991970 -6264613 + L1ME4a LINE L1 5438 5644 -477 3162 146 4 4 chr2 246992071 246992557 -6264026 - MER66B LTR ERV1 0 486 1 693 253 46 42 chr2 246992656 246992897 -6263686 + MLT1K LTR MaLR 346 587 -1 357 306 113 52 chr2 246993152 246993400 -6263183 + L1ME3A LINE L1 5312 5574 -596 389 319 35 31 chr2 246993421 246993681 -6262902 + L1ME3A LINE L1 5621 5881 -289 350 317 24 6 chr2 246994008 246994172 -6262411 + L1ME4a LINE L1 5725 5891 -230 2114 93 20 17 chr2 246994174 246994475 -6262108 + AluSx SINE Alu 1 302 -10 314 333 107 50 chr2 246996146 246996189 -6260394 - L3 LINE CR1 -929 648 609 1779 180 7 0 chr2 246996189 246996494 -6260089 - AluJb SINE Alu -1 311 5 314 333 107 50 chr2 246996494 246996711 -6259872 - L3 LINE CR1 -968 609 373 338 328 25 25 chr2 246996976 246997098 -6259485 - L2 LINE L2 -1 3271 3150 935 212 22 0 chr2 246997186 246997365 -6259218 + MLT1E LTR MaLR 1 183 -410 406 261 88 62 chr2 246997455 246997540 -6259043 + L2 LINE L2 3021 3102 -211 2187 96 0 16 chr2 246997540 246997854 -6258729 - AluSp SINE Alu -4 309 1 406 261 88 62 chr2 246997854 246997994 -6258589 + L2 LINE L2 3102 3252 -61 209 200 0 0 chr2 246998182 246998217 -6258366 + (TGAA)n Simple_repeat Simple_repeat 4 38 0 2011 110 4 4 chr2 246998353 246998681 -6257902 - AluSx SINE Alu 0 328 1 207 182 0 0 chr2 246998797 246998830 -6257753 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 873 202 56 20 chr2 246998888 246999140 -6257443 + L1M4 LINE L1 4598 4858 -1288 666 196 27 7 chr2 246999136 246999284 -6257299 - L1MA4 LINE L1 -34 6266 6116 * 1159 153 84 5 chr2 246999294 246999484 -6257099 - MER1B DNA MER1_type -92 205 1 1839 133 77 0 chr2 246999486 246999564 -6257019 - L1MA4 LINE L1 -185 6115 6038 752 223 191 7 chr2 246999564 246999842 -6256741 - L1PA14 LINE L1 -117 6044 5716 407 284 13 60 chr2 246999845 247000077 -6256506 - AluJo SINE Alu -17 295 75 1484 179 3 25 chr2 247000418 247000703 -6255880 - AluJo SINE Alu -23 289 11 306 250 104 0 chr2 247000744 247000840 -6255743 + MER103 DNA DNA 10 115 -51 324 102 0 0 chr2 247001324 247001373 -6255210 + (TC)n Simple_repeat Simple_repeat 2 50 0 369 0 0 0 chr2 247001622 247001663 -6254920 + (CA)n Simple_repeat Simple_repeat 2 42 0 861 268 73 54 chr2 247003310 247003447 -6253136 - L1MCc LINE L1 -4363 2759 2626 261 0 0 0 chr2 247003447 247003476 -6253107 + (ATTG)n Simple_repeat Simple_repeat 2 30 0 2082 103 0 0 chr2 247003477 247003758 -6252825 - AluSx SINE Alu -31 281 1 861 268 73 54 chr2 247003758 247004084 -6252499 - L1MCc LINE L1 -4495 2627 2285 928 126 0 22 chr2 247004111 247004246 -6252337 + AluSq SINE Alu 56 187 -126 311 191 0 0 chr2 247004257 247004320 -6252263 + C-rich Low_complexity Low_complexity 1 63 0 319 345 0 0 chr2 247004345 247004461 -6252122 + C-rich Low_complexity Low_complexity 1 116 0 211 301 18 0 chr2 247004480 247004593 -6251990 + C-rich Low_complexity Low_complexity 1 115 0 1958 105 3 52 chr2 247004736 247005061 -6251522 - AluSc SINE Alu 0 309 1 1773 257 31 48 chr2 247005063 247005439 -6251144 - L1MCc LINE L1 -4856 2085 1704 2371 75 0 22 chr2 247005439 247005759 -6250824 - AluSq SINE Alu 0 313 1 1773 257 31 48 chr2 247005759 247006507 -6250076 - L1MCc LINE L1 -5237 1704 968 2737 89 0 5 chr2 247006510 247006879 -6249704 + MER41A LTR ERV1 1 367 -187 2957 133 23 62 chr2 247006896 247007460 -6249123 - LTR10A LTR ERV1 -65 544 3 1104 93 121 22 chr2 247007461 247007643 -6248940 + MER41B LTR ERV1 436 635 0 240 53 0 53 chr2 247007621 247007659 -6248924 + LTR19C LTR ERV1 625 660 -119 * 377 248 24 78 chr2 247007669 247007875 -6248708 - L1MCc LINE L1 -5486 937 743 347 269 114 87 chr2 247008070 247008472 -6248111 - L1MCc LINE L1 -5986 437 25 2181 94 0 0 chr2 247008570 247008879 -6247704 - AluSq SINE Alu 0 309 1 237 336 53 0 chr2 247009324 247009437 -6247146 - MIR SINE MIR -6 256 138 234 0 0 0 chr2 247009599 247009625 -6246958 + (TTC)n Simple_repeat Simple_repeat 2 27 0 2006 124 0 7 chr2 247009637 247009928 -6246655 - AluSx SINE Alu -23 289 1 337 305 14 45 chr2 247010023 247010246 -6246337 - L1MC4a LINE L1 -1907 5901 5686 668 231 26 0 chr2 247010251 247010407 -6246176 + MIR SINE MIR 92 251 -11 270 0 0 0 chr2 247010411 247010441 -6246142 + (TTA)n Simple_repeat Simple_repeat 3 32 0 367 279 44 25 chr2 247010545 247010703 -6245880 + L1MC/D LINE L1 5370 5530 -2278 2488 281 35 41 chr2 247011841 247011980 -6244603 + MER69 DNA AcHobo 1 139 -2387 1677 148 105 11 chr2 247011980 247012257 -6244326 - AluJo SINE Alu -9 303 1 2488 281 35 41 chr2 247012257 247013089 -6243494 + MER69 DNA AcHobo 139 967 -1559 2378 109 6 0 chr2 247013089 247013400 -6243183 - AluSq SINE Alu 0 313 1 2488 281 35 41 chr2 247013400 247013468 -6243115 + MER69 DNA AcHobo 967 1034 -1492 460 181 45 110 chr2 247013476 247013631 -6242952 + MER69 DNA AcHobo 2382 2526 0 1845 254 106 17 chr2 247013669 247014523 -6242060 - L1MC4a LINE L1 0 7904 7020 1354 129 0 0 chr2 247014528 247014722 -6241861 - AluSg/x SINE Alu -1 309 116 2317 108 0 10 chr2 247014727 247015032 -6241551 - AluSg SINE Alu -4 306 5 1627 237 93 2 chr2 247015035 247015486 -6241097 - L1MC4 LINE L1 -996 7046 6555 342 0 0 0 chr2 247017241 247017279 -6239304 + (TG)n Simple_repeat Simple_repeat 2 39 0 507 297 7 0 chr2 247019278 247019416 -6237167 - MER5B DNA MER1_type -6 172 34 1160 215 71 45 chr2 247019440 247019519 -6237064 + MLT1C LTR MaLR 53 129 -338 2331 119 14 30 chr2 247019519 247019888 -6236695 + THE1B LTR MaLR 2 364 0 1160 215 71 45 chr2 247019888 247020162 -6236421 + MLT1C LTR MaLR 129 415 -52 1171 157 91 5 chr2 247020176 247020374 -6236209 - AluJo SINE Alu -16 296 82 318 182 0 0 chr2 247020381 247020436 -6236147 + MLT1C LTR MaLR 413 467 0 1830 145 36 36 chr2 247021577 247021880 -6234703 + AluJo SINE Alu 4 306 -6 473 301 75 20 chr2 247021940 247022139 -6234444 - MIR SINE MIR -19 243 34 276 161 35 23 chr2 247022212 247022299 -6234284 + (TA)n Simple_repeat Simple_repeat 2 89 0 365 262 41 35 chr2 247022316 247022488 -6234095 + L1ME LINE L1 5623 5795 -326 348 294 210 33 chr2 247022509 247022937 -6233646 + HAL1 LINE L1 95 598 -1909 1832 182 0 22 chr2 247022977 247023296 -6233287 + AluJo SINE Alu 1 312 0 1665 194 63 34 chr2 247024167 247024611 -6231972 + MLT1C LTR MaLR 9 465 -2 1790 176 0 0 chr2 247024921 247025205 -6231378 - AluJo SINE Alu -1 311 28 2226 110 23 0 chr2 247025896 247026196 -6230387 + AluSq SINE Alu 3 309 -4 2242 111 7 0 chr2 247027353 247027650 -6228933 - AluSx SINE Alu -13 299 1 387 0 0 0 chr2 247028038 247028081 -6228502 + (TG)n Simple_repeat Simple_repeat 2 44 0 2097 124 3 0 chr2 247028490 247028812 -6227771 - AluSx SINE Alu 0 323 1 1910 142 23 16 chr2 247028824 247029134 -6227449 - AluSx SINE Alu 0 312 1 877 211 42 0 chr2 247029172 247029362 -6227221 - MER3 DNA MER1_type -11 198 1 2290 86 4 0 chr2 247029399 247029720 -6226863 - AluSg SINE Alu 0 322 1 543 268 67 89 chr2 247029980 247030345 -6226238 + L1MC4a LINE L1 5282 5654 -2154 1520 169 0 109 chr2 247030345 247030676 -6225907 + AluJb SINE Alu 1 295 -7 543 268 67 89 chr2 247030676 247030862 -6225721 + L1MC4a LINE L1 5654 5843 -1965 2131 117 34 0 chr2 247030862 247031153 -6225430 + AluSc SINE Alu 1 301 -8 1396 111 29 0 chr2 247031159 247031367 -6225216 + L1MA2 LINE L1 6091 6304 0 543 268 67 89 chr2 247031367 247031437 -6225146 + L1MC4a LINE L1 5848 5897 -1911 2090 121 4 0 chr2 247032572 247032853 -6223730 + AluSq SINE Alu 1 282 -31 486 0 0 0 chr2 247032854 247032908 -6223675 + (TA)n Simple_repeat Simple_repeat 2 55 0 307 295 81 94 chr2 247032948 247033182 -6223401 - L1ME LINE L1 -336 5785 5555 1349 214 69 48 chr2 247033264 247033642 -6222941 - MLT1B LTR MaLR -4 386 1 185 200 180 50 chr2 247033892 247033992 -6222591 + MIR3 SINE MIR 12 124 -84 1754 168 0 35 chr2 247034886 247035201 -6221382 + AluJo SINE Alu 1 304 -8 266 274 8 113 chr2 247035489 247035613 -6220970 + L2 LINE L2 3160 3270 -2 433 286 27 27 chr2 247035810 247035957 -6220626 - MIR SINE MIR -68 194 48 220 234 93 65 chr2 247036002 247036109 -6220474 + MIR SINE MIR 31 141 -67 5086 207 25 21 chr2 247036737 247036899 -6219684 - L1 LINE L1 -870 5276 5116 2594 52 0 7 chr2 247036899 247037206 -6219377 - AluY SINE Alu -6 305 1 5086 207 25 21 chr2 247037206 247037280 -6219303 - L1 LINE L1 -1030 5116 5044 597 52 0 0 chr2 247037280 247037357 -6219226 + (TTCC)n Simple_repeat Simple_repeat 3 79 0 2393 72 0 0 chr2 247037362 247037641 -6218942 - AluSq SINE Alu -34 279 1 5086 207 25 21 chr2 247037641 247038578 -6218005 - L1 LINE L1 -1105 5041 4092 * 5577 117 11 3 chr2 247038576 247039462 -6217121 + L1PA16 LINE L1 5274 6166 0 267 307 50 0 chr2 247039630 247039731 -6216852 - MIR3 SINE MIR -43 165 60 1600 143 0 13 chr2 247040188 247040419 -6216164 - AluSq SINE Alu -85 228 1 2002 112 0 0 chr2 247041004 247041262 -6215321 + AluSq SINE Alu 1 258 -55 425 252 137 0 chr2 247042639 247042778 -6213805 + MIR3 SINE MIR 40 197 -11 2414 91 0 3 chr2 247042907 247043216 -6213367 + AluSq SINE Alu 1 308 -5 2296 199 62 19 chr2 247043227 247043755 -6212828 + L1MB2 LINE L1 5621 6171 0 2319 107 3 3 chr2 247043762 247044071 -6212512 + AluSc SINE Alu 1 309 0 1190 225 28 48 chr2 247044148 247044382 -6212201 + Charlie4a DNA MER1_type 43 267 -1694 2421 71 13 7 chr2 247044382 247044690 -6211893 + AluY SINE Alu 1 310 -1 1190 225 28 48 chr2 247044690 247044855 -6211728 + Charlie4a DNA MER1_type 267 434 -74 1925 157 0 7 chr2 247044860 247045153 -6211430 + AluJb SINE Alu 1 291 -21 396 0 0 0 chr2 247045232 247045276 -6211307 + (TG)n Simple_repeat Simple_repeat 1 44 0 1845 174 75 85 chr2 247045399 247045892 -6210691 + MLT1D LTR MaLR 18 505 0 1049 129 154 40 chr2 247046480 247046681 -6209902 + AluJb SINE Alu 1 224 -88 1444 148 7 84 chr2 247046834 247046924 -6209659 - AluJo SINE Alu -19 293 198 1602 89 36 13 chr2 247046924 247047149 -6209434 + MER30 DNA MER1_type 1 230 0 1444 148 7 84 chr2 247047149 247047342 -6209241 - AluJo SINE Alu -114 198 32 299 339 0 9 chr2 247047423 247047535 -6209048 + C-rich Low_complexity Low_complexity 4 114 0 1950 168 7 3 chr2 247047795 247048098 -6208485 + AluJo SINE Alu 1 304 -8 1572 198 132 24 chr2 247048171 247048625 -6207958 + MLT1D LTR MaLR 1 503 -2 619 248 133 10 chr2 247048868 247049238 -6207345 - MLT1G LTR MaLR -9 581 96 298 256 12 24 chr2 247049293 247049375 -6207208 + MIR SINE MIR 35 115 -147 410 302 62 49 chr2 247049678 247049966 -6206617 + MLT1H LTR MaLR 60 351 -198 1964 170 0 0 chr2 247050634 247050934 -6205649 + AluJb SINE Alu 3 302 -10 313 20 61 0 chr2 247051170 247051219 -6205364 + (TTTC)n Simple_repeat Simple_repeat 4 55 0 2482 22 0 0 chr2 247051237 247051508 -6205075 - AluYa5 SINE Alu -6 305 35 2158 125 0 14 chr2 247051511 247051669 -6204914 - AluSx SINE Alu -21 291 137 2898 10 0 0 chr2 247051669 247051977 -6204606 - AluYa5 SINE Alu -3 308 1 2158 125 0 14 chr2 247051977 247052113 -6204470 - AluSx SINE Alu -175 137 1 481 252 67 0 chr2 247052191 247052310 -6204273 + L2 LINE L2 3187 3313 0 441 0 0 0 chr2 247052461 247052510 -6204073 + (CA)n Simple_repeat Simple_repeat 1 49 0 270 159 0 0 chr2 247052604 247052648 -6203935 - L2 LINE L2 -5 3308 3265 1144 281 72 43 chr2 247052793 247053002 -6203581 - L2 LINE L2 -5 3308 3107 2332 151 63 79 chr2 247053002 247053511 -6203072 - MLT1D LTR MaLR 0 505 5 1144 281 72 43 chr2 247053511 247053771 -6202812 - L2 LINE L2 -206 3107 2825 1655 178 64 32 chr2 247053771 247054107 -6202476 + MLT1B LTR MaLR 2 326 -64 2416 68 0 37 chr2 247054107 247054429 -6202154 - AluY SINE Alu -1 310 1 1768 144 58 0 chr2 247054429 247054706 -6201877 - AluJb SINE Alu -19 293 1 1655 178 64 32 chr2 247054706 247054745 -6201838 + MLT1B LTR MaLR 325 390 0 1742 234 32 36 chr2 247054754 247055224 -6201359 + LTR40a LTR ERVL 52 519 0 1376 272 204 10 chr2 247055250 247055938 -6200645 - L2 LINE L2 -554 2760 1940 23 0 0 0 chr2 247056832 247056855 -6199728 + GC_rich Low_complexity Low_complexity 1 23 0 25 51 0 0 chr2 247056929 247056968 -6199615 + GC_rich Low_complexity Low_complexity 1 39 0 243 133 0 0 chr2 247057101 247057146 -6199437 + (CGGGGG)n Simple_repeat Simple_repeat 3 47 0 24 32 0 0 chr2 247057178 247057209 -6199374 + GC_rich Low_complexity Low_complexity 1 31 0 40 37 0 0 chr2 247057258 247057312 -6199271 + GC_rich Low_complexity Low_complexity 1 54 0 40 91 0 0 chr2 247057502 247057612 -6198971 + GC_rich Low_complexity Low_complexity 1 110 0 28 29 0 0 chr2 247057676 247057711 -6198872 + GC_rich Low_complexity Low_complexity 1 35 0 201 158 37 37 chr2 247057712 247057794 -6198789 + (CGCGG)n Simple_repeat Simple_repeat 3 84 0 247 314 16 58 chr2 247060199 247060320 -6196263 - MIR SINE MIR -56 206 91 2323 71 7 7 chr2 247060714 247061010 -6195573 - AluY SINE Alu -15 296 1 627 260 23 28 chr2 247063400 247063577 -6193006 - MER5A DNA MER1_type -10 179 4 2337 152 60 18 chr2 247063861 247064296 -6192287 - LTR32 LTR ERVL 0 471 19 189 0 0 0 chr2 247065813 247065834 -6190749 + (T)n Simple_repeat Simple_repeat 1 21 0 1614 172 13 23 chr2 247066707 247067010 -6189573 - AluJb SINE Alu -12 300 1 1234 148 218 8 chr2 247067013 247067256 -6189327 - AluJo SINE Alu -8 294 1 251 198 187 11 chr2 247067268 247067359 -6189224 - L1ME3A LINE L1 -8 6162 6056 279 272 19 10 chr2 247067646 247067749 -6188834 - L1ME3A LINE L1 -417 5745 5642 2408 117 0 0 chr2 247069037 247069346 -6187237 - AluSx SINE Alu -3 309 1 180 0 0 0 chr2 247069350 247069370 -6187213 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 625 143 0 0 chr2 247069400 247069491 -6187092 + AluJ/FLAM SINE Alu 1 91 -221 1042 160 0 0 chr2 247069492 247069648 -6186935 + AluJo/FRAM SINE Alu 141 296 -16 310 319 11 11 chr2 247070783 247070901 -6185682 - MIR SINE MIR -61 147 31 2629 134 60 44 chr2 247070912 247071433 -6185150 - L1PA15 LINE L1 -4 6161 5633 227 189 30 60 chr2 247071958 247072047 -6184536 - MIR SINE MIR -73 135 48 2219 98 6 38 chr2 247072332 247072650 -6183933 - AluSx SINE Alu -4 308 1 1809 214 80 48 chr2 247072651 247072889 -6183694 - L1ME1 LINE L1 -11 6155 5926 3568 125 17 8 chr2 247072889 247073409 -6183174 + MER1A DNA MER1_type 3 527 0 1809 214 80 48 chr2 247073409 247073792 -6182791 - L1ME1 LINE L1 -240 5926 5514 188 240 60 0 chr2 247074029 247074079 -6182504 + MIR3 SINE MIR 108 160 -48 488 226 0 29 chr2 247074144 247074281 -6182302 + MER20 DNA MER1_type 28 160 -59 558 208 3 0 chr2 247074908 247075230 -6181353 + (TG)n Simple_repeat Simple_repeat 1 323 0 1730 166 14 4 chr2 247075425 247075702 -6180881 + AluJo SINE Alu 1 280 -32 210 71 0 0 chr2 247075708 247075736 -6180847 + (CAAT)n Simple_repeat Simple_repeat 2 29 0 541 187 38 148 chr2 247076268 247076349 -6180234 - MER5A DNA MER1_type 0 189 101 2406 99 0 3 chr2 247076349 247076661 -6179922 + AluSx SINE Alu 2 312 0 541 187 38 148 chr2 247076661 247076788 -6179795 - MER5A DNA MER1_type -88 101 4 204 40 0 0 chr2 247077273 247077298 -6179285 + (CA)n Simple_repeat Simple_repeat 1 25 0 242 286 31 20 chr2 247078051 247078149 -6178434 - MARNA DNA Mariner -99 487 389 293 219 23 78 chr2 247078264 247078392 -6178191 - LTR67 LTR ERVL -11 546 426 351 0 0 0 chr2 247079163 247079202 -6177381 + (CTG)n Simple_repeat Simple_repeat 1 39 0 230 239 0 0 chr2 247079318 247079364 -6177219 + L2 LINE L2 3224 3269 -3 22 0 0 0 chr2 247079450 247079472 -6177111 + AT_rich Low_complexity Low_complexity 1 22 0 968 215 200 21 chr2 247080127 247080452 -6176131 - MLT1B LTR MaLR -4 386 4 2377 102 13 0 chr2 247080762 247081066 -6175517 + AluSx SINE Alu 1 308 -4 1749 158 21 21 chr2 247082188 247082479 -6174104 - AluJo SINE Alu -21 291 1 789 265 55 50 chr2 247082767 247082892 -6173691 - L1MC5 LINE L1 -49 7912 7789 2233 101 10 7 chr2 247082892 247083188 -6173395 - AluSq SINE Alu -16 297 1 789 265 55 50 chr2 247083188 247083499 -6173084 - L1MC5 LINE L1 -172 7789 7474 654 246 128 104 chr2 247083513 247084131 -6172452 - L1MC5 LINE L1 -549 7412 6780 693 252 143 46 chr2 247084602 247084849 -6171734 - L1MC5 LINE L1 -1824 5984 5762 351 0 0 0 chr2 247084849 247084888 -6171695 + (TG)n Simple_repeat Simple_repeat 2 40 0 693 252 143 46 chr2 247084888 247085117 -6171466 - L1MC5 LINE L1 -2046 5762 5462 1541 213 38 30 chr2 247086054 247086425 -6170158 - MLT1A2 LTR MaLR 0 374 1 1483 193 3 60 chr2 247090492 247090793 -6165790 - AluJo SINE Alu -28 284 1 365 320 164 14 chr2 247091046 247091321 -6165262 - L1ME LINE L1 -309 5812 5497 198 71 0 0 chr2 247091453 247091481 -6165102 + (CCCCCT)n Simple_repeat Simple_repeat 3 30 0 2160 100 7 13 chr2 247091783 247092082 -6164501 - AluSx SINE Alu -15 297 1 2115 180 59 34 chr2 247093482 247093955 -6162628 - MLT1D LTR MaLR 0 505 21 2233 99 0 13 chr2 247094716 247095019 -6161564 - AluSx SINE Alu -13 299 1 1500 181 42 32 chr2 247095304 247095613 -6160970 - AluJb SINE Alu 0 312 1 234 250 143 89 chr2 247099236 247099684 -6156899 + L2 LINE L2 2817 3288 -25 459 0 0 0 chr2 247100037 247100088 -6156495 + (TG)n Simple_repeat Simple_repeat 1 51 0 243 0 0 0 chr2 247100220 247100247 -6156336 + (TG)n Simple_repeat Simple_repeat 2 28 0 279 0 0 0 chr2 247100278 247100309 -6156274 + (TG)n Simple_repeat Simple_repeat 2 32 0 207 0 0 0 chr2 247100340 247100363 -6156220 + (TG)n Simple_repeat Simple_repeat 2 24 0 207 0 0 0 chr2 247100438 247100461 -6156122 + (TG)n Simple_repeat Simple_repeat 2 24 0 333 0 0 0 chr2 247100536 247100573 -6156010 + (TG)n Simple_repeat Simple_repeat 2 38 0 534 263 15 8 chr2 247102479 247102612 -6153971 - AluJo SINE Alu -11 301 168 960 151 0 137 chr2 247102786 247102885 -6153698 - AluJo SINE Alu -126 186 130 2194 127 10 0 chr2 247102885 247103176 -6153407 + AluSx SINE Alu 6 299 -13 960 151 0 137 chr2 247103176 247103288 -6153295 - AluJo SINE Alu -182 130 4 2083 128 10 3 chr2 247103416 247103706 -6152877 - AluSx SINE Alu -20 292 1 1829 115 0 37 chr2 247103910 247104180 -6152403 - AluSq SINE Alu -17 296 37 2519 218 25 19 chr2 247104897 247105440 -6151143 + L1MB5 LINE L1 5567 6116 -58 2489 61 0 3 chr2 247105440 247105737 -6150846 - AluY SINE Alu -15 296 1 2519 218 25 19 chr2 247105737 247105789 -6150794 + L1MB5 LINE L1 6116 6166 -8 306 0 0 0 chr2 247107129 247107163 -6149420 + (TG)n Simple_repeat Simple_repeat 1 34 0 2285 118 0 7 chr2 247108849 247109153 -6147430 - AluSx SINE Alu -10 302 1 195 69 0 0 chr2 247110382 247110411 -6146172 + (TCTA)n Simple_repeat Simple_repeat 4 32 0 2449 88 0 3 chr2 247110598 247110906 -6145677 + AluSq SINE Alu 6 312 -1 2237 105 10 0 chr2 247111857 247112151 -6144432 - AluSx SINE Alu -15 297 1 2278 104 0 10 chr2 247112330 247112629 -6143954 - AluSq SINE Alu -17 296 1 222 349 0 0 chr2 247112629 247112695 -6143888 + MIR SINE MIR 173 238 -24 225 263 263 0 chr2 247113141 247113240 -6143343 + L1ME3A LINE L1 6037 6161 -9 222 321 37 79 chr2 247113806 247114021 -6142562 - L3 LINE CR1 -515 1062 857 1520 227 135 14 chr2 247114546 247114991 -6141592 + MLT1D LTR MaLR 7 505 0 207 0 0 0 chr2 247115174 247115197 -6141386 + (A)n Simple_repeat Simple_repeat 1 23 0 1099 223 30 82 chr2 247115350 247115750 -6140833 - MLT1B LTR MaLR -11 379 1 250 253 0 53 chr2 247116145 247116220 -6140363 + C-rich Low_complexity Low_complexity 2 72 0 934 41 0 35 chr2 247117074 247117219 -6139364 + (TTC)n Simple_repeat Simple_repeat 2 141 0 1274 188 102 4 chr2 247117222 247117478 -6139105 - AluJb SINE Alu -31 281 1 1814 182 0 6 chr2 247118941 247119254 -6137329 + AluJb SINE Alu 1 311 -1 382 256 106 48 chr2 247120867 247121094 -6135489 + LTR16A LTR ERVL 131 370 -80 1075 233 60 0 chr2 247121197 247121498 -6135085 - MER33 DNA MER1_type -5 319 1 464 167 56 0 chr2 247122510 247122600 -6133983 + L1MB3 LINE L1 6089 6183 0 1736 111 21 29 chr2 247122605 247122885 -6133698 + AluSx SINE Alu 1 278 -34 1940 187 77 8 chr2 247123269 247123659 -6132924 - MSTB LTR MaLR 0 426 10 228 122 0 0 chr2 247124634 247124675 -6131908 + (CCCCCT)n Simple_repeat Simple_repeat 6 46 0 2400 109 0 0 chr2 247128909 247129211 -6127372 - AluSx SINE Alu -10 302 1 1080 82 8 0 chr2 247129211 247129345 -6127238 - AluSq/x SINE Alu -177 135 1 2339 82 24 0 chr2 247129930 247130223 -6126360 + AluSq SINE Alu 1 300 -13 360 223 32 11 chr2 247130400 247130494 -6126089 + MER58A DNA MER1_type 28 123 0 214 306 31 20 chr2 247132028 247132126 -6124457 + MER5A DNA MER1_type 30 128 -61 2373 107 3 0 chr2 247132318 247132626 -6123957 - AluSx SINE Alu -3 309 1 1683 155 32 11 chr2 247132864 247133141 -6123442 - AluJb SINE Alu -19 293 11 946 286 80 9 chr2 247134638 247134963 -6121620 - MER87 LTR ERV1 0 541 194 2085 106 33 0 chr2 247136225 247136521 -6120062 - AluSq SINE Alu 0 305 1 180 111 0 0 chr2 247137427 247137454 -6119129 + (TTGG)n Simple_repeat Simple_repeat 1 27 0 407 285 97 0 chr2 247139098 247139242 -6117341 - MIR SINE MIR -10 252 95 1708 177 0 14 chr2 247140481 247140769 -6115814 - AluJb SINE Alu -20 292 9 226 207 112 69 chr2 247141044 247141160 -6115423 - L1ME4a LINE L1 -3 6118 5998 1419 177 40 56 chr2 247141217 247141742 -6114841 - L1ME4a LINE L1 -712 5466 4942 287 256 0 35 chr2 247141854 247141940 -6114643 + CT-rich Low_complexity Low_complexity 3 85 0 1437 230 131 18 chr2 247141943 247142386 -6114197 + MLT1D LTR MaLR 1 493 -12 446 225 83 0 chr2 247144203 247144323 -6112260 + MIR SINE MIR 18 147 -115 1680 145 41 17 chr2 247144338 247144628 -6111955 + AluJb SINE Alu 14 310 -2 524 300 42 5 chr2 247145304 247145494 -6111089 - MIR SINE MIR -6 256 60 1297 160 14 0 chr2 247147214 247147426 -6109157 - AluSg/x SINE Alu -14 298 84 302 301 69 52 chr2 247147508 247147639 -6108944 - L1MC4 LINE L1 -1 8041 7904 1859 115 81 0 chr2 247147639 247147919 -6108664 - AluSg SINE Alu 0 301 1 302 301 69 52 chr2 247147919 247147959 -6108624 - L1MC4 LINE L1 -138 7904 7866 820 275 58 8 chr2 247148322 247148580 -6108003 - MLT1C LTR MaLR -1 466 196 421 279 102 0 chr2 247148630 247148777 -6107806 + MER115 DNA AcHobo 210 371 -322 194 354 51 40 chr2 247149865 247150040 -6106543 - MIR SINE MIR -19 243 67 1609 239 87 28 chr2 247150187 247150656 -6105927 - MLT1D LTR MaLR -8 497 1 1674 86 0 5 chr2 247150664 247150874 -6105709 + AluSc SINE Alu 79 287 -22 280 333 62 0 chr2 247150929 247151025 -6105558 - MIR SINE MIR -55 207 106 328 326 48 7 chr2 247152274 247152421 -6104162 + MIR SINE MIR 106 258 -4 2472 133 26 12 chr2 247152422 247152844 -6103739 - MSTA LTR MaLR 0 428 1 614 268 104 11 chr2 247152907 247153090 -6103493 - MER3 DNA MER1_type -8 201 2 654 173 0 0 chr2 247153339 247153449 -6103134 - FLAM_C SINE Alu -33 110 1 243 0 0 0 chr2 247153484 247153511 -6103072 + (TG)n Simple_repeat Simple_repeat 2 28 0 252 0 0 0 chr2 247153527 247153555 -6103028 + (CA)n Simple_repeat Simple_repeat 2 29 0 2317 96 0 0 chr2 247153672 247153964 -6102619 - AluSx SINE Alu -20 292 1 222 0 25 50 chr2 247154408 247154448 -6102135 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 390 42 0 0 chr2 247154450 247154498 -6102085 + (TG)n Simple_repeat Simple_repeat 1 48 0 2630 46 7 3 chr2 247154500 247154803 -6101780 - AluY SINE Alu -7 304 1 2187 113 7 0 chr2 247154807 247155100 -6101483 - AluSx SINE Alu -17 295 1 1051 153 11 6 chr2 247155373 247155556 -6101027 + MSTB LTR MaLR 1 184 -242 1344 153 25 44 chr2 247155590 247155865 -6100718 + MSTB LTR MaLR 157 426 0 216 300 71 43 chr2 247156009 247156149 -6100434 + L3 LINE CR1 1045 1188 -389 185 176 0 0 chr2 247156922 247156956 -6099627 - MER5B DNA MER1_type -8 170 137 1987 153 0 28 chr2 247157465 247157785 -6098798 + AluJo SINE Alu 1 311 -1 22 56 0 0 chr2 247158073 247158109 -6098474 + AT_rich Low_complexity Low_complexity 1 36 0 2060 128 10 7 chr2 247158368 247158657 -6097926 - AluSx SINE Alu -22 290 1 207 0 0 0 chr2 247158667 247158690 -6097893 + (T)n Simple_repeat Simple_repeat 1 23 0 213 322 58 0 chr2 247160235 247160322 -6096261 - MER5A DNA MER1_type -72 117 26 814 251 109 0 chr2 247160589 247160864 -6095719 + MLT1A1 LTR MaLR 55 359 -6 374 165 187 0 chr2 247161400 247161491 -6095092 + MER6A DNA MER2_type 1 108 -497 2574 127 100 6 chr2 247161947 247162418 -6094165 + MER6A DNA MER2_type 91 605 0 22 56 0 0 chr2 247162678 247162714 -6093869 + AT_rich Low_complexity Low_complexity 1 36 0 3080 95 30 0 chr2 247164325 247164757 -6091826 - MLT2A2 LTR ERVL -8 445 1 277 332 53 32 chr2 247164765 247164952 -6091631 + L2 LINE L2 2381 2571 -743 587 211 115 6 chr2 247164963 247165119 -6091464 - MLT1B LTR MaLR -7 383 211 2202 108 67 0 chr2 247165213 247165554 -6091029 - THE1B LTR MaLR 0 364 1 512 136 114 0 chr2 247165565 247165653 -6090930 + AluJ/FLAM SINE Alu 1 98 -214 440 294 85 5 chr2 247165727 247165928 -6090655 + L2 LINE L2 2588 2804 -510 951 269 19 75 chr2 247165951 247166271 -6090312 + MER58B DNA MER1_type 40 341 0 472 252 186 62 chr2 247166281 247166557 -6090026 + L2 LINE L2 2824 3064 -249 2334 107 0 0 chr2 247166557 247166857 -6089726 - AluSx SINE Alu -12 300 1 472 252 186 62 chr2 247166857 247166876 -6089707 + L2 LINE L2 3064 3079 -234 2103 131 31 31 chr2 247166876 247167236 -6089347 + THE1B LTR MaLR 1 360 -4 472 252 186 62 chr2 247167236 247167375 -6089208 + L2 LINE L2 3079 3313 0 450 200 11 11 chr2 247168065 247168160 -6088423 + FLAM_C SINE Alu 12 106 -37 29 0 0 0 chr2 247168731 247168760 -6087823 + AT_rich Low_complexity Low_complexity 1 29 0 213 182 114 0 chr2 247168958 247169002 -6087581 - MIR SINE MIR -10 252 204 432 283 24 24 chr2 247169132 247169298 -6087285 - L1ME LINE L1 -482 5639 5474 272 196 150 0 chr2 247169331 247169464 -6087119 - AluSc SINE Alu -9 290 138 1837 96 39 25 chr2 247169564 247169844 -6086739 - AluSx SINE Alu -17 295 12 2092 141 0 16 chr2 247171569 247171874 -6084709 + AluSx SINE Alu 1 300 -12 225 0 0 0 chr2 247172019 247172044 -6084539 + (TG)n Simple_repeat Simple_repeat 1 25 0 643 93 28 19 chr2 247172226 247172333 -6084250 - AluY SINE Alu -202 109 2 250 264 28 0 chr2 247172383 247172455 -6084128 + CT-rich Low_complexity Low_complexity 3 76 0 480 180 8 55 chr2 247173650 247173778 -6082805 + FRAM SINE Alu 54 175 -1 2294 100 10 0 chr2 247174104 247174393 -6082190 - AluSx SINE Alu -20 292 1 1941 146 47 15 chr2 247176355 247176698 -6079885 - MSTB LTR MaLR 0 426 73 191 309 49 12 chr2 247176994 247177075 -6079508 + L2 LINE L2 2974 3057 -215 224 346 71 8 chr2 247177368 247177495 -6079088 + L2 LINE L2 3137 3271 -1 2276 65 41 7 chr2 247178057 247178343 -6078240 + AluY SINE Alu 1 297 -9 243 0 0 0 chr2 247178343 247178370 -6078213 + (CCAA)n Simple_repeat Simple_repeat 2 28 0 217 176 20 0 chr2 247178501 247178552 -6078031 + A-rich Low_complexity Low_complexity 2 53 0 231 318 185 30 chr2 247180637 247181076 -6075507 + L2 LINE L2 2075 2613 -701 998 158 98 20 chr2 247181076 247181279 -6075304 + MER20 DNA MER1_type 1 219 0 231 318 185 30 chr2 247181279 247181373 -6075210 + L2 LINE L2 2613 2691 -623 368 333 36 18 chr2 247181411 247181579 -6075004 - L1ME4a LINE L1 -68 6053 5883 1961 105 18 96 chr2 247182143 247182475 -6074108 - AluSx SINE Alu -6 306 1 1210 94 0 49 chr2 247183574 247183762 -6072821 - L1PB1 LINE L1 -1 6150 5971 2166 98 42 0 chr2 247183762 247184047 -6072536 - AluSg SINE Alu -1 309 13 1210 94 0 49 chr2 247184047 247184061 -6072522 - L1PB1 LINE L1 -180 5971 5958 39 0 0 0 chr2 247184225 247184264 -6072319 + AT_rich Low_complexity Low_complexity 1 39 0 1800 116 65 0 chr2 247184267 247184542 -6072041 + AluSc SINE Alu 4 296 -13 932 268 52 10 chr2 247185538 247185844 -6070739 + MER46C DNA MER2_type 1 319 -19 216 0 0 0 chr2 247186910 247186934 -6069649 + (A)n Simple_repeat Simple_repeat 1 24 0 789 157 124 46 chr2 247189265 247189482 -6067101 + MER46A DNA MER2_type 1 234 -2 409 359 72 30 chr2 247189502 247189875 -6066708 - L1ME4a LINE L1 -299 5822 5434 2198 128 0 19 chr2 247191545 247191857 -6064726 - AluSq SINE Alu -7 306 1 1426 146 29 24 chr2 247192288 247192534 -6064049 + AluJo SINE Alu 12 258 -54 188 281 47 16 chr2 247194573 247194637 -6061946 + L2 LINE L2 3206 3271 -1 1007 142 12 0 chr2 247195019 247195181 -6061402 + AluSg SINE Alu 1 164 -146 1655 114 12 12 chr2 247195387 247195641 -6060942 + AluSg SINE Alu 52 305 -5 215 282 0 51 chr2 247196457 247196535 -6060048 - MIR SINE MIR -66 196 123 380 162 0 0 chr2 247196697 247196765 -6059818 + U4 snRNA snRNA 1 68 -77 34 102 0 0 chr2 247197141 247197259 -6059324 + GC_rich Low_complexity Low_complexity 1 118 0 253 304 256 15 chr2 247197942 247198208 -6058375 + L3 LINE CR1 1141 1470 -107 2361 76 0 3 chr2 247200700 247200990 -6055593 - AluY SINE Alu -21 290 2 1349 95 19 38 chr2 247201521 247201731 -6054852 - AluSg/x SINE Alu 0 309 104 1541 218 34 8 chr2 247203155 247203513 -6053070 - MLT1A2 LTR MaLR -7 367 1 1708 114 124 15 chr2 247205863 247206136 -6050447 - AluSx SINE Alu -9 303 1 313 252 96 26 chr2 247206885 247207000 -6049583 - L2 LINE L2 0 3313 3191 192 286 100 0 chr2 247208036 247208106 -6048477 - MIR SINE MIR -164 98 22 2567 62 7 0 chr2 247208464 247208771 -6047812 - AluY SINE Alu -2 309 1 2028 132 11 0 chr2 247208779 247209066 -6047517 - AluSx SINE Alu -21 291 2 397 262 39 10 chr2 247209069 247209172 -6047411 + MIR SINE MIR 56 161 -101 231 146 0 0 chr2 247209201 247209242 -6047341 + (TG)n Simple_repeat Simple_repeat 2 42 0 2146 118 10 10 chr2 247209447 247209752 -6046831 + AluSx SINE Alu 1 305 -7 57 71 0 0 chr2 247209867 247209980 -6046603 + AT_rich Low_complexity Low_complexity 1 113 0 2354 74 3 12 chr2 247210121 247210459 -6046124 - L1PA6 LINE L1 0 6154 5820 2500 78 0 10 chr2 247210459 247210767 -6045816 - AluY SINE Alu -6 305 1 1287 153 59 16 chr2 247212151 247212464 -6044119 - MER4B LTR ERV1 0 610 261 487 106 11 43 chr2 247212464 247212558 -6044025 - MER4A LTR ERV1 -566 98 8 213 159 0 0 chr2 247213023 247213067 -6043516 + (TA)n Simple_repeat Simple_repeat 1 44 0 334 264 28 101 chr2 247214785 247214888 -6041695 - MIR SINE MIR -66 196 110 2114 130 3 0 chr2 247214888 247215187 -6041396 + AluSq SINE Alu 1 300 -13 334 264 28 101 chr2 247215187 247215261 -6041322 - MIR SINE MIR -152 110 32 432 306 95 17 chr2 247215799 247216031 -6040552 - L2 LINE L2 -563 2751 2502 219 294 16 71 chr2 247216655 247216839 -6039744 + (CCCCAG)n Simple_repeat Simple_repeat 1 174 0 381 245 41 10 chr2 247216867 247216965 -6039618 + MIR SINE MIR 47 147 -115 1748 170 146 42 chr2 247216985 247217437 -6039146 - MLT1D LTR MaLR -6 499 1 422 261 195 43 chr2 247218679 247218982 -6037601 + MLT1J LTR MaLR 163 511 0 2443 183 91 31 chr2 247219905 247220144 -6036439 - MER39 LTR ERV1 -2 705 482 2301 106 3 0 chr2 247220144 247220436 -6036147 + AluSq SINE Alu 1 293 -20 2443 183 91 31 chr2 247220436 247220817 -6035766 - MER39 LTR ERV1 -225 482 1 352 275 36 43 chr2 247221960 247222098 -6034485 + MIR3 SINE MIR 9 145 -63 2181 103 7 0 chr2 247222664 247222987 -6033596 + AluSq SINE Alu 1 325 0 2020 181 40 21 chr2 247223540 247223961 -6032622 + MLT1C LTR MaLR 38 466 -1 223 241 103 0 chr2 247224013 247224071 -6032512 + MIR SINE MIR 117 180 -82 1781 157 3 49 chr2 247224109 247224414 -6032169 - AluJo SINE Alu -21 291 1 642 215 141 0 chr2 247224529 247224697 -6031886 - MLT2B2 LTR ERVL 0 515 317 472 162 0 0 chr2 247224673 247224747 -6031836 - MLT2B1 LTR ERVL -230 290 217 * 248 240 0 13 chr2 247225120 247225195 -6031388 + CT-rich Low_complexity Low_complexity 2 75 0 22 35 0 0 chr2 247225500 247225529 -6031054 + AT_rich Low_complexity Low_complexity 1 29 0 270 284 32 32 chr2 247226847 247226942 -6029641 - MIR3 SINE MIR -15 193 99 2478 84 7 0 chr2 247226976 247227286 -6029297 + AluSq SINE Alu 1 312 -1 2325 90 3 7 chr2 247228722 247229021 -6027562 - AluSq SINE Alu -15 298 1 531 299 9 19 chr2 247229389 247229600 -6026983 - MLT1J2 LTR MaLR -240 210 2 2110 119 17 3 chr2 247229822 247230116 -6026467 + AluSg SINE Alu 1 298 -12 2108 66 55 7 chr2 247230700 247230973 -6025610 + AluY SINE Alu 18 303 -8 1933 171 3 3 chr2 247231219 247231518 -6025065 - AluJo SINE Alu -13 299 1 2144 88 7 52 chr2 247232422 247232729 -6023854 + AluSc SINE Alu 1 293 -16 180 259 65 93 chr2 247233682 247233790 -6022793 - L2 LINE L2 -3 3310 3206 189 394 61 0 chr2 247233908 247234007 -6022576 + L3 LINE CR1 177 281 -1296 2123 129 3 19 chr2 247234105 247234422 -6022161 + AluSx SINE Alu 1 312 0 242 196 0 0 chr2 247234963 247235009 -6021574 + L1ME LINE L1 5615 5660 -461 1554 111 4 53 chr2 247235817 247236060 -6020523 + AluSq SINE Alu 1 231 -82 682 147 0 56 chr2 247236060 247236193 -6020390 + AluSg/x SINE Alu 168 294 -18 257 243 29 0 chr2 247236274 247236344 -6020239 + MIR SINE MIR 80 151 -111 2231 68 7 4 chr2 247236391 247236754 -6019829 + AluY SINE Alu 1 364 0 2260 111 3 0 chr2 247236981 247237278 -6019305 + AluSx SINE Alu 1 298 -14 272 222 17 26 chr2 247239740 247239857 -6016726 + (TGG)n Simple_repeat Simple_repeat 2 117 0 2120 100 57 0 chr2 247240679 247240958 -6015625 - AluSq SINE Alu -18 295 1 1109 136 68 6 chr2 247241305 247241482 -6015101 + AluSg/x SINE Alu 114 301 -11 246 228 18 0 chr2 247242269 247242326 -6014257 + MER5A DNA MER1_type 1 58 -131 215 283 133 26 chr2 247243104 247243217 -6013366 + MIR SINE MIR 84 208 -54 271 298 48 0 chr2 247244660 247244744 -6011839 - MIR SINE MIR -66 196 109 1952 163 29 11 chr2 247245889 247246269 -6010314 - MLT1B LTR MaLR 0 390 4 2155 110 3 10 chr2 247246307 247246616 -6009967 + AluSq SINE Alu 1 307 -6 1943 143 176 55 chr2 247247160 247247649 -6008934 - LTR10A LTR ERV1 -61 548 1 1436 193 34 37 chr2 247248164 247248459 -6008124 - AluJo SINE Alu -18 294 1 205 195 0 0 chr2 247248605 247248646 -6007937 + MIR SINE MIR 110 150 -58 2049 111 10 26 chr2 247249401 247249708 -6006875 - AluSx SINE Alu -10 302 1 237 291 76 0 chr2 247250463 247250542 -6006041 - MIR SINE MIR -35 227 143 412 291 58 63 chr2 247254602 247254980 -6001603 - LTR16A LTR ERVL -15 435 60 641 153 34 0 chr2 247255074 247255192 -6001391 + FLAM_A SINE Alu 1 122 -11 1985 127 3 29 chr2 247255559 247255695 -6000888 + AluSx SINE Alu 1 139 -173 2498 76 0 0 chr2 247255695 247255997 -6000586 + AluY SINE Alu 1 302 -9 1985 127 3 29 chr2 247255997 247256175 -6000408 + AluSx SINE Alu 139 307 -5 2246 112 0 13 chr2 247257544 247257849 -5998734 - AluSx SINE Alu -11 301 1 1597 113 0 14 chr2 247258283 247258504 -5998079 + AluSc SINE Alu 78 295 -14 303 299 104 8 chr2 247258667 247258801 -5997782 - MIR3 SINE MIR -10 198 52 235 206 15 66 chr2 247259215 247259351 -5997232 + (TTGTG)n Simple_repeat Simple_repeat 4 132 0 1727 128 3 138 chr2 247259890 247260282 -5996301 - MER1B DNA MER1_type 0 339 1 2119 124 0 0 chr2 247262421 247262703 -5993880 + AluSx SINE Alu 1 282 -30 300 90 60 30 chr2 247262727 247262827 -5993756 + (TA)n Simple_repeat Simple_repeat 1 103 0 412 106 69 19 chr2 247262849 247263009 -5993574 + (TA)n Simple_repeat Simple_repeat 2 169 0 24 0 0 0 chr2 247263027 247263051 -5993532 + AT_rich Low_complexity Low_complexity 1 24 0 2289 113 3 0 chr2 247264796 247265098 -5991485 - AluSx SINE Alu -9 303 1 272 130 37 0 chr2 247265407 247265461 -5991122 + C-rich Low_complexity Low_complexity 1 56 0 1586 123 9 0 chr2 247265497 247265716 -5990867 - AluSx SINE Alu -40 272 52 288 128 0 0 chr2 247265716 247265755 -5990828 - AluS SINE Alu -211 91 53 543 110 22 22 chr2 247265755 247265846 -5990737 - AluS SINE Alu -221 92 2 2403 69 3 0 chr2 247266237 247266525 -5990058 + AluSc SINE Alu 1 289 -20 2503 93 0 0 chr2 247266837 247267149 -5989434 - AluSx SINE Alu 0 312 1 2230 68 29 35 chr2 247268078 247268389 -5988194 - AluY SINE Alu -2 309 1 380 175 22 22 chr2 247271783 247271920 -5984663 + (TATG)n Simple_repeat Simple_repeat 2 138 0 180 290 21 43 chr2 247272499 247272592 -5983991 + L2 LINE L2 3179 3269 -3 698 216 56 25 chr2 247272743 247272945 -5983638 - MIR SINE MIR -21 241 34 632 278 36 21 chr2 247272950 247273144 -5983439 + MER3 DNA MER1_type 3 199 -10 2088 116 20 0 chr2 247273881 247274183 -5982400 - AluSg SINE Alu -2 308 1 193 276 112 52 chr2 247275351 247275467 -5981116 - L2 LINE L2 -25 3247 3125 1353 192 122 0 chr2 247275568 247275855 -5980728 - MLT1A1 LTR MaLR 0 365 44 2443 96 0 6 chr2 247275866 247276179 -5980404 - AluSx SINE Alu -1 311 1 202 147 0 0 chr2 247276260 247276294 -5980289 - L2 LINE L2 -224 3048 3015 191 302 77 41 chr2 247276414 247276583 -5980000 - L2 LINE L2 -554 2760 2586 2261 110 3 0 chr2 247276652 247276960 -5979623 - AluY SINE Alu -2 309 1 250 264 28 0 chr2 247277009 247277081 -5979502 + CT-rich Low_complexity Low_complexity 3 76 0 2263 129 0 0 chr2 247282859 247283170 -5973413 - AluSx SINE Alu -1 311 1 243 0 0 0 chr2 247283340 247283367 -5973216 + (TG)n Simple_repeat Simple_repeat 2 28 0 634 190 78 0 chr2 247283403 247283545 -5973038 - MLT1C LTR MaLR -10 457 305 610 132 186 0 chr2 247284069 247284198 -5972385 - MLT1C LTR MaLR -10 457 305 1113 225 49 7 chr2 247284338 247284623 -5971960 - MLT1C LTR MaLR -170 297 1 1178 109 16 21 chr2 247284651 247284843 -5971740 + MER30 DNA MER1_type 1 191 -39 342 0 0 0 chr2 247285628 247285666 -5970917 + (TTGG)n Simple_repeat Simple_repeat 3 40 0 289 348 9 9 chr2 247288912 247289027 -5967556 - MLT1K LTR MaLR -304 284 170 249 33 0 0 chr2 247290161 247290191 -5966392 + (TG)n Simple_repeat Simple_repeat 1 30 0 349 222 254 0 chr2 247291689 247291815 -5964768 + MER58C DNA MER1_type 56 213 -2 189 0 0 0 chr2 247292336 247292357 -5964226 + (A)n Simple_repeat Simple_repeat 1 21 0 836 199 7 0 chr2 247292358 247292499 -5964084 - FRAM SINE Alu -30 146 5 22 35 0 0 chr2 247292516 247292545 -5964038 + AT_rich Low_complexity Low_complexity 1 29 0 217 303 146 0 chr2 247292900 247292989 -5963594 + L2 LINE L2 3200 3301 -12 333 279 78 41 chr2 247293917 247294136 -5962447 - HAL1b LINE L1 -1053 295 69 1461 162 65 4 chr2 247298463 247298710 -5957873 + AluJo SINE Alu 37 298 -14 578 236 155 0 chr2 247300128 247300302 -5956281 - MIR SINE MIR -14 248 48 2485 93 0 0 chr2 247300398 247300708 -5955875 - AluSx SINE Alu -2 310 1 286 298 193 0 chr2 247300921 247301092 -5955491 - MIR SINE MIR -32 230 27 2542 78 7 0 chr2 247303540 247303903 -5952680 - AluY SINE Alu 0 365 1 453 253 80 12 chr2 247304140 247304302 -5952281 - MER104 DNA Tc2 0 180 8 2231 123 0 0 chr2 247304735 247305027 -5951556 + AluSx SINE Alu 1 292 -20 242 228 18 0 chr2 247306963 247307020 -5949563 + (TATATG)n Simple_repeat Simple_repeat 2 59 0 2151 119 10 3 chr2 247307696 247307989 -5948594 + AluSx SINE Alu 1 295 -17 1147 132 0 6 chr2 247307989 247308156 -5948427 + AluSg/x SINE Alu 137 302 -10 306 0 0 0 chr2 247308228 247308262 -5948321 + (T)n Simple_repeat Simple_repeat 1 34 0 2231 106 7 3 chr2 247310777 247311080 -5945503 + AluSx SINE Alu 1 304 -8 336 305 19 52 chr2 247311636 247311790 -5944793 + L2 LINE L2 3158 3306 -7 1935 151 7 7 chr2 247314030 247314329 -5942254 - AluSx SINE Alu -13 299 1 232 254 32 0 chr2 247314427 247314490 -5942093 + MER58 DNA MER1_type 2356 2420 0 587 267 135 23 chr2 247314677 247314980 -5941603 - MLT1A1 LTR MaLR -1 364 28 2180 118 0 3 chr2 247315273 247315570 -5941013 + AluSx SINE Alu 1 296 -16 256 237 0 17 chr2 247315884 247315943 -5940640 - MIR SINE MIR -70 138 81 22 0 0 0 chr2 247316271 247316293 -5940290 + AT_rich Low_complexity Low_complexity 1 22 0 244 320 53 60 chr2 247316559 247316709 -5939874 - L2 LINE L2 -1 3271 3123 1816 161 14 0 chr2 247317304 247317589 -5938994 - AluSx SINE Alu -23 289 1 1661 132 10 54 chr2 247318503 247318798 -5937785 + MER1B DNA MER1_type 58 339 0 231 167 0 0 chr2 247319974 247320016 -5936567 + (TG)n Simple_repeat Simple_repeat 2 43 0 1893 164 7 3 chr2 247320643 247320942 -5935641 - AluSx SINE Alu -12 300 1 2642 52 0 3 chr2 247321010 247321317 -5935266 - AluY SINE Alu -5 306 1 2253 108 7 0 chr2 247321947 247322254 -5934329 + AluSx SINE Alu 1 309 -3 1651 196 0 13 chr2 247322426 247322737 -5933846 - AluJo SINE Alu -4 308 2 2235 105 3 10 chr2 247323674 247323979 -5932604 + AluSq SINE Alu 1 303 -10 2118 134 0 16 chr2 247324434 247324739 -5931844 + AluSx SINE Alu 1 300 -12 186 43 0 0 chr2 247324884 247324907 -5931676 + (TG)n Simple_repeat Simple_repeat 1 23 0 880 157 120 37 chr2 247324989 247325205 -5931378 + MER46A DNA MER2_type 1 234 -2 436 345 75 31 chr2 247325279 247325598 -5930985 - L1ME LINE L1 -355 5766 5434 250 237 229 23 chr2 247327753 247327884 -5928699 - MIR3 SINE MIR -6 202 45 1181 125 6 0 chr2 247328584 247328752 -5927831 - AluSg/x SINE Alu -10 302 134 2197 115 13 3 chr2 247328752 247329056 -5927527 - AluSq SINE Alu -6 307 1 2185 131 0 6 chr2 247329617 247329931 -5926652 - AluSx SINE Alu 0 312 1 231 186 57 29 chr2 247331869 247331939 -5924644 - L1ME4a LINE L1 -44 6077 6006 2288 85 3 28 chr2 247331960 247332279 -5924304 - AluY SINE Alu 0 311 1 746 126 0 0 chr2 247332279 247332382 -5924201 - AluSg/x SINE Alu -19 290 188 433 235 115 55 chr2 247332661 247332861 -5923722 + MLT1D LTR MaLR 1 212 -293 414 221 87 8 chr2 247332973 247333100 -5923483 + MLT1D LTR MaLR 365 501 -4 234 139 0 0 chr2 247333633 247333669 -5922914 + LTR10A LTR ERV1 13 48 -561 1952 121 29 35 chr2 247333821 247334135 -5922448 - AluSx SINE Alu 0 312 1 4117 112 28 40 chr2 247335158 247335800 -5920783 - MER51A LTR ERV1 0 634 1 236 267 83 58 chr2 247339031 247339151 -5917432 + MIR SINE MIR 21 143 -119 306 177 16 0 chr2 247340365 247340427 -5916156 - L1MC2 LINE L1 -5 6339 6277 5002 157 42 8 chr2 247340427 247341447 -5915136 - L1MC1 LINE L1 -94 6239 5185 189 216 39 0 chr2 247342795 247342846 -5913737 + L2 LINE L2 3261 3313 0 2275 92 3 0 chr2 247345389 247345673 -5910910 - AluSp SINE Alu -28 285 1 425 301 60 6 chr2 247345888 247346071 -5910512 + MIR SINE MIR 70 262 0 1942 133 0 45 chr2 247346289 247346597 -5909986 + AluSx SINE Alu 1 294 -18 222 220 34 34 chr2 247347789 247347848 -5908735 - MER5A DNA MER1_type -1 188 130 740 144 182 0 chr2 247347852 247347984 -5908599 + FRAM SINE Alu 1 156 -20 220 339 91 36 chr2 247348924 247349145 -5907438 - L2 LINE L2 -604 2710 2478 1730 143 82 4 chr2 247349682 247349961 -5906622 + AluJo SINE Alu 1 301 -11 1849 158 6 22 chr2 247349979 247350290 -5906293 + AluSx SINE Alu 1 306 -6 34 24 0 0 chr2 247350567 247350608 -5905975 + AT_rich Low_complexity Low_complexity 1 41 0 274 339 77 8 chr2 247351564 247351694 -5904889 - L2 LINE L2 -32 3240 3102 462 306 76 35 chr2 247352044 247352361 -5904222 + MER102b DNA MER1_type 1 330 -11 2068 123 3 0 chr2 247353583 247353894 -5902689 + AluSx SINE Alu 1 312 0 1296 248 86 12 chr2 247353999 247354418 -5902165 - Charlie4a DNA MER1_type -58 450 1 218 298 48 24 chr2 247354853 247354937 -5901646 + MIR SINE MIR 177 262 0 1749 159 7 14 chr2 247354964 247355260 -5901323 - AluJb SINE Alu -18 294 1 187 303 66 0 chr2 247361377 247361453 -5895130 - L2 LINE L2 -18 3254 3174 2325 80 28 0 chr2 247362747 247363035 -5893548 + AluY SINE Alu 2 297 -14 213 291 25 38 chr2 247363700 247363779 -5892804 + L2 LINE L2 2238 2315 -999 543 304 55 0 chr2 247364588 247364769 -5891814 - MIR SINE MIR -39 223 33 261 0 0 0 chr2 247368691 247368720 -5887863 + (TG)n Simple_repeat Simple_repeat 2 30 0 737 232 104 38 chr2 247369250 247369539 -5887044 + L1ME2 LINE L1 5847 6154 -10 282 116 0 0 chr2 247369632 247369675 -5886908 + (CGGA)n Simple_repeat Simple_repeat 2 44 0 261 222 139 0 chr2 247373135 247373207 -5883376 + L2 LINE L2 3212 3293 -20 377 244 30 0 chr2 247374027 247374162 -5882421 + GA-rich Low_complexity Low_complexity 4 142 0 309 240 124 25 chr2 247375858 247375979 -5880604 + HAL1 LINE L1 1569 1701 -806 216 97 0 0 chr2 247376967 247376998 -5879585 + (TTTTC)n Simple_repeat Simple_repeat 3 33 0 338 167 10 104 chr2 247377012 247377108 -5879475 + MLT1G LTR MaLR 452 538 -52 2073 94 7 24 chr2 247377115 247377412 -5879171 - AluSx SINE Alu -20 292 1 207 284 16 110 chr2 247378084 247378211 -5878372 - L2 LINE L2 -655 2659 2545 201 305 116 56 chr2 247378244 247378710 -5877873 - L2 LINE L2 -884 2430 1937 181 273 23 0 chr2 247379117 247379161 -5877422 + MIR3 SINE MIR 118 162 -46 21 0 0 0 chr2 247379801 247379822 -5876761 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 247380028 247380050 -5876533 + AT_rich Low_complexity Low_complexity 1 22 0 2132 94 7 0 chr2 247380050 247380337 -5876246 - AluSx SINE Alu -23 289 1 653 260 76 100 chr2 247382728 247383239 -5873344 - MLT1J LTR MaLR -8 503 5 1482 149 60 36 chr2 247384136 247384438 -5872145 + AluJo SINE Alu 1 309 -3 189 143 63 95 chr2 247384547 247384610 -5871973 - MIR3 SINE MIR -23 185 125 1661 162 27 7 chr2 247385644 247385941 -5870642 - AluJo SINE Alu -9 303 1 232 154 200 46 chr2 247386000 247386065 -5870518 - MER117 DNA MER1_type 0 197 123 834 198 9 78 chr2 247386188 247386405 -5870178 + MER20 DNA MER1_type 1 202 -17 324 250 58 19 chr2 247386703 247386807 -5869776 + MIR3 SINE MIR 12 119 -89 579 196 0 0 chr2 247388166 247388309 -5868274 + (TGG)n Simple_repeat Simple_repeat 1 143 0 32 26 0 0 chr2 247390799 247390838 -5865745 + AT_rich Low_complexity Low_complexity 1 39 0 250 184 0 0 chr2 247391140 247391178 -5865405 + L2 LINE L2 3259 3296 -17 273 234 94 0 chr2 247394749 247394813 -5861770 + MIR3 SINE MIR 107 176 -32 251 255 230 20 chr2 247395122 247395322 -5861261 - MIR SINE MIR 0 262 21 204 40 0 0 chr2 247396099 247396124 -5860459 + (T)n Simple_repeat Simple_repeat 1 25 0 21 0 0 0 chr2 247396993 247397014 -5859569 + GC_rich Low_complexity Low_complexity 1 21 0 4046 157 19 28 chr2 247398744 247399521 -5857062 - LTR1 LTR ERV1 0 785 16 1061 229 143 18 chr2 247400453 247400789 -5855794 - MLT1B LTR MaLR -12 378 1 183 238 0 0 chr2 247400789 247400831 -5855752 - MIR SINE MIR -122 86 45 1985 126 3 0 chr2 247401523 247401837 -5854746 - AluSg SINE Alu 0 315 1 2258 142 3 3 chr2 247402697 247403034 -5853549 + MER1B DNA MER1_type 1 337 0 281 256 13 0 chr2 247408064 247408142 -5848441 + MER117 DNA MER1_type 14 92 -105 228 272 87 39 chr2 247408567 247408670 -5847913 + MIR SINE MIR 4 111 -151 212 298 0 0 chr2 247408716 247408773 -5847810 - L2 LINE L2 -4 3268 3212 820 279 68 19 chr2 247408853 247409161 -5847422 - MER33 DNA MER1_type -1 323 1 215 159 0 23 chr2 247410359 247410403 -5846180 + T-rich Low_complexity Low_complexity 3 45 0 2016 184 18 5 chr2 247412237 247412622 -5843961 - MLT1B LTR MaLR 0 390 1 721 281 51 0 chr2 247412838 247413034 -5843549 - MER58A DNA MER1_type -16 208 3 351 0 0 0 chr2 247413150 247413189 -5843394 + (TG)n Simple_repeat Simple_repeat 1 39 0 438 211 34 75 chr2 247414852 247414915 -5841668 - MLT1G LTR MaLR -1 589 525 2038 112 3 57 chr2 247414915 247415229 -5841354 + AluSg SINE Alu 1 297 -13 438 211 34 75 chr2 247415229 247415312 -5841271 - MLT1G LTR MaLR -65 525 449 348 278 65 18 chr2 247415469 247415638 -5840945 - MLT1G LTR MaLR -244 305 129 2064 120 4 0 chr2 247415977 247416251 -5840332 + AluSp SINE Alu 23 297 -16 357 218 0 11 chr2 247417137 247417224 -5839359 - MLT1G-int LTR MaLR -1627 108 23 345 309 8 8 chr2 247417245 247417368 -5839215 - MLT1G LTR MaLR -8 582 460 296 240 67 0 chr2 247417564 247417639 -5838944 + MIR SINE MIR 68 147 -115 282 252 96 35 chr2 247417744 247417859 -5838724 + MIR SINE MIR 125 246 -16 227 372 54 0 chr2 247418687 247418816 -5837767 + L3 LINE CR1 1438 1573 -4 1886 166 10 3 chr2 247419338 247419634 -5836949 - AluJb SINE Alu -14 298 1 2018 129 26 3 chr2 247419652 247419954 -5836629 - AluSc SINE Alu 0 309 1 198 103 0 0 chr2 247420408 247420437 -5836146 + (TG)n Simple_repeat Simple_repeat 1 29 0 27 0 0 0 chr2 247421840 247421867 -5834716 + AT_rich Low_complexity Low_complexity 1 27 0 2381 87 10 0 chr2 247422449 247422747 -5833836 - AluSq SINE Alu -12 301 1 26 64 0 0 chr2 247422867 247422914 -5833669 + AT_rich Low_complexity Low_complexity 1 47 0 263 296 80 34 chr2 247423806 247423982 -5832601 + Charlie8 DNA MER1_type 1 184 -2233 1699 163 3 45 chr2 247425247 247425560 -5831023 + AluJo SINE Alu 6 305 -7 713 187 16 8 chr2 247425560 247425683 -5830900 + AluJo/FRAM SINE Alu 134 257 -55 23 33 0 0 chr2 247425683 247425713 -5830870 + AT_rich Low_complexity Low_complexity 1 30 0 2083 77 0 33 chr2 247426089 247426363 -5830220 + AluSx SINE Alu 43 307 -5 206 132 19 0 chr2 247427651 247427704 -5828879 + T-rich Low_complexity Low_complexity 2 55 0 1740 90 4 51 chr2 247428117 247428373 -5828210 - AluSq SINE Alu -69 244 1 227 208 0 19 chr2 247428385 247428438 -5828145 + CT-rich Low_complexity Low_complexity 1 52 0 1093 183 74 5 chr2 247428439 247428579 -5828004 - AluJo SINE Alu -40 272 112 183 42 0 0 chr2 247428579 247428603 -5827980 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 1093 183 74 5 chr2 247428603 247428664 -5827919 - AluJo SINE Alu -200 112 57 1004 214 120 29 chr2 247429800 247430038 -5826545 + MER2 DNA MER2_type 4 278 -67 2291 108 3 10 chr2 247430038 247430352 -5826231 - AluSx SINE Alu 0 312 1 1004 214 120 29 chr2 247430352 247430421 -5826162 + MER2 DNA MER2_type 278 339 -6 216 0 0 0 chr2 247430459 247430483 -5826100 + (CAG)n Simple_repeat Simple_repeat 1 24 0 692 188 0 16 chr2 247430483 247430611 -5825972 - FLAM_C SINE Alu -16 127 2 676 289 98 32 chr2 247430690 247431213 -5825370 - L1ME4a LINE L1 -73 6048 5492 1476 124 5 9 chr2 247434101 247434319 -5822264 + AluJo SINE Alu 82 298 -14 2149 100 42 3 chr2 247435761 247436050 -5820533 - AluSx SINE Alu -12 300 1 239 281 42 42 chr2 247436317 247436413 -5820170 + L3 LINE CR1 1465 1560 -17 430 232 10 10 chr2 247436664 247436763 -5819820 + MER81 DNA DNA 1 99 -15 2252 108 10 3 chr2 247437470 247437765 -5818818 + AluSq SINE Alu 1 297 -16 64 43 0 0 chr2 247439293 247439385 -5817198 + GC_rich Low_complexity Low_complexity 1 92 0 213 278 112 53 chr2 247439643 247439812 -5816771 + L2 LINE L2 3072 3250 -22 311 178 0 14 chr2 247440624 247440697 -5815886 + (CA)n Simple_repeat Simple_repeat 1 72 0 553 342 96 30 chr2 247441366 247441748 -5814835 + L2 LINE L2 2818 3228 -44 483 18 0 0 chr2 247441748 247441804 -5814779 + (TGGA)n Simple_repeat Simple_repeat 1 56 0 553 342 96 30 chr2 247441804 247441816 -5814767 + L2 LINE L2 3228 3238 -34 2433 170 68 0 chr2 247442003 247442474 -5814109 - L1MB2 LINE L1 -3 6168 5666 245 152 0 22 chr2 247443345 247443391 -5813192 - L2 LINE L2 -44 3269 3225 252 0 0 0 chr2 247445098 247445126 -5811457 + (A)n Simple_repeat Simple_repeat 1 28 0 85 92 0 0 chr2 247445226 247445465 -5811118 + AT_rich Low_complexity Low_complexity 1 239 0 226 321 80 53 chr2 247445531 247445718 -5810865 - L2 LINE L2 0 3313 3122 2317 86 21 0 chr2 247446583 247446873 -5809710 + AluSp SINE Alu 1 296 -17 588 168 9 62 chr2 247447067 247447180 -5809403 + AluJo SINE Alu 76 182 -130 2085 99 50 3 chr2 247447550 247447832 -5808751 - AluSx SINE Alu -11 301 7 1605 79 9 9 chr2 247448484 247448713 -5807870 + L1PB1 LINE L1 5921 6149 -2 22 35 0 0 chr2 247448753 247448782 -5807801 + AT_rich Low_complexity Low_complexity 1 29 0 841 160 0 103 chr2 247449324 247449518 -5807065 + FRAM SINE Alu 1 174 -2 1906 158 116 13 chr2 247449726 247450105 -5806478 + MSTA LTR MaLR 11 428 0 21 0 0 0 chr2 247450188 247450209 -5806374 + AT_rich Low_complexity Low_complexity 1 21 0 2041 75 0 29 chr2 247450428 247450707 -5805876 + AluY SINE Alu 39 309 -2 21 36 0 0 chr2 247450751 247450779 -5805804 + AT_rich Low_complexity Low_complexity 1 28 0 810 243 33 9 chr2 247452690 247452904 -5803679 + MER20 DNA MER1_type 1 219 0 320 279 325 22 chr2 247453421 247453837 -5802746 + L3 LINE CR1 664 1205 -372 469 286 75 14 chr2 247453871 247454018 -5802565 - MER5B DNA MER1_type -16 162 7 243 357 10 10 chr2 247454048 247454146 -5802437 + L3 LINE CR1 1261 1358 -219 619 292 199 37 chr2 247454326 247455479 -5801104 + L2 LINE L2 1507 2846 -468 196 298 77 19 chr2 247457060 247457164 -5799419 + L2 LINE L2 3182 3291 -22 1565 100 162 0 chr2 247458002 247458243 -5798340 + AluSg1 SINE Alu 1 280 -29 407 271 187 34 chr2 247458380 247458415 -5798168 - L2 LINE L2 -1877 1437 1409 354 23 0 0 chr2 247458415 247458458 -5798125 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 407 271 187 34 chr2 247458458 247459123 -5797460 - L2 LINE L2 -1905 1409 630 631 182 77 33 chr2 247459140 247459321 -5797262 - MER20 DNA MER1_type -2 217 29 295 364 138 29 chr2 247459689 247460131 -5796452 + L3 LINE CR1 198 687 -890 22 0 0 0 chr2 247462637 247462659 -5793924 + AT_rich Low_complexity Low_complexity 1 22 0 640 206 18 24 chr2 247463395 247463565 -5793018 + L1MB8 LINE L1 6010 6178 0 294 291 190 0 chr2 247465345 247465471 -5791112 + MIR3 SINE MIR 14 159 -64 283 328 51 26 chr2 247465689 247465884 -5790699 - L2 LINE L2 -41 3272 3073 2045 107 7 32 chr2 247466299 247466608 -5789975 - AluSp SINE Alu -12 301 1 1389 166 42 4 chr2 247466625 247466890 -5789693 - AluJo SINE Alu -20 292 18 500 217 88 83 chr2 247468986 247469203 -5787380 + Tigger8 DNA MER2_type 244 461 -205 844 152 55 0 chr2 247469389 247469534 -5787049 + MER46A DNA MER2_type 1 153 -83 181 230 100 60 chr2 247470086 247470186 -5786397 - MER5C DNA MER1_type -160 164 61 1620 168 0 13 chr2 247470224 247470540 -5786043 + AluJb SINE Alu 1 312 0 238 333 13 0 chr2 247470755 247470833 -5785750 + MIR SINE MIR 73 151 -111 1502 133 168 8 chr2 247471151 247471407 -5785176 - AluSg SINE Alu -3 297 1 24 0 0 0 chr2 247471864 247471888 -5784695 + AT_rich Low_complexity Low_complexity 1 24 0 302 271 179 7 chr2 247472721 247472861 -5783722 - MIR SINE MIR -6 256 93 2181 91 3 0 chr2 247473297 247473584 -5782999 + AluSq SINE Alu 1 288 -25 4562 64 13 0 chr2 247474276 247474825 -5781758 - HERVL LTR ERVL -575 5079 4524 2954 181 65 58 chr2 247475611 247475664 -5780919 - Charlie1a DNA MER1_type -1307 1454 1403 2060 125 7 0 chr2 247475664 247475961 -5780622 + AluSx SINE Alu 1 299 -13 2954 181 65 58 chr2 247475961 247476704 -5779879 - Charlie1a DNA MER1_type -1358 1403 652 1436 227 68 51 chr2 247476696 247477168 -5779415 - Charlie1a DNA MER1_type -909 546 67 * 30 0 0 0 chr2 247477194 247477224 -5779359 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr2 247479029 247479052 -5777531 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 247479182 247479205 -5777378 + AT_rich Low_complexity Low_complexity 1 23 0 1947 134 10 0 chr2 247479556 247479862 -5776721 - AluSq SINE Alu -4 309 1 980 120 0 7 chr2 247480952 247481102 -5775481 + AluSg/x SINE Alu 154 302 -8 772 177 0 0 chr2 247481387 247481511 -5775072 + FLAM_C SINE Alu 1 124 -9 1088 170 50 0 chr2 247481696 247481896 -5774687 + MER2 DNA MER2_type 1 210 -135 222 37 0 0 chr2 247482017 247482044 -5774539 + (TAA)n Simple_repeat Simple_repeat 2 28 0 2267 79 7 0 chr2 247484069 247484360 -5772223 + AluSx SINE Alu 1 293 -19 256 234 39 91 chr2 247484940 247484966 -5771617 - L2 LINE L2 0 3313 3287 2016 110 17 0 chr2 247484966 247485256 -5771327 + AluSx SINE Alu 1 295 -17 256 234 39 91 chr2 247485256 247485306 -5771277 - L2 LINE L2 -26 3287 3241 24 53 0 0 chr2 247485401 247485439 -5771144 + AT_rich Low_complexity Low_complexity 1 38 0 340 149 69 23 chr2 247485442 247485529 -5771054 - L1MA8 LINE L1 -7 6284 6194 185 253 81 101 chr2 247485997 247486096 -5770487 + MIR3 SINE MIR 81 177 -31 558 325 58 26 chr2 247486932 247487347 -5769236 - L1ME LINE L1 -436 5685 5258 358 268 91 79 chr2 247487350 247487615 -5768968 - L1ME LINE L1 -906 5240 4973 204 244 0 0 chr2 247487616 247487657 -5768926 + (TATATG)n Simple_repeat Simple_repeat 5 45 0 415 303 59 69 chr2 247487657 247488046 -5768537 - L1ME LINE L1 -1130 5016 4632 295 132 7 20 chr2 247488070 247488129 -5768454 + MER4A LTR ERV1 552 598 -66 22 0 0 0 chr2 247488129 247488151 -5768432 + AT_rich Low_complexity Low_complexity 1 22 0 199 187 99 88 chr2 247488701 247488792 -5767791 - L2 LINE L2 -100 3213 3122 1713 144 24 17 chr2 247489720 247490011 -5766572 + AluJb SINE Alu 1 293 -19 389 306 59 33 chr2 247490213 247490520 -5766063 + HAL1 LINE L1 1425 1739 -768 265 345 138 7 chr2 247490842 247490987 -5765596 + MIR SINE MIR 2 165 -97 208 154 39 0 chr2 247491771 247491823 -5764760 + CT-rich Low_complexity Low_complexity 2 55 0 181 328 30 15 chr2 247494888 247494955 -5761628 + L2 LINE L2 3205 3272 0 456 276 154 11 chr2 247495371 247495657 -5760926 + L1ME4a LINE L1 5577 5903 -218 548 284 156 6 chr2 247497777 247497837 -5758746 - L1ME3A LINE L1 -104 6066 6016 189 0 0 0 chr2 247497837 247497858 -5758725 + (CACCC)n Simple_repeat Simple_repeat 3 23 0 548 284 156 6 chr2 247497858 247498149 -5758434 - L1ME3A LINE L1 -154 6016 5662 508 276 39 28 chr2 247498295 247498476 -5758107 - LTR40a LTR ERVL -255 264 82 744 295 114 26 chr2 247498863 247499317 -5757266 - LTR40a LTR ERVL -25 494 1 296 244 134 25 chr2 247501178 247501297 -5755286 - Charlie8 DNA MER1_type -2189 228 97 436 315 24 6 chr2 247502800 247502965 -5753618 - LTR33 LTR ERVL -333 188 21 267 266 128 18 chr2 247503578 247503687 -5752896 - MER5A DNA MER1_type -53 136 16 310 353 47 24 chr2 247503994 247504164 -5752419 - MER5B DNA MER1_type -3 175 2 259 282 24 12 chr2 247505485 247505570 -5751013 - MIR SINE MIR -118 144 59 189 0 0 0 chr2 247505759 247505780 -5750803 + (TTA)n Simple_repeat Simple_repeat 2 22 0 196 375 0 0 chr2 247506533 247506613 -5749970 + MIR SINE MIR 64 143 -65 2306 75 0 0 chr2 247507860 247508154 -5748429 - AluSc SINE Alu -15 294 1 444 288 125 12 chr2 247508236 247508396 -5748187 - MIR SINE MIR -49 213 36 681 256 23 0 chr2 247508415 247508591 -5747992 + MER5A DNA MER1_type 10 189 0 269 255 21 21 chr2 247508605 247508699 -5747884 + MER5A DNA MER1_type 7 100 -89 331 259 11 14 chr2 247512244 247512535 -5744048 + (CCA)n Simple_repeat Simple_repeat 1 290 0 449 188 0 10 chr2 247512555 247512656 -5743927 + (CCA)n Simple_repeat Simple_repeat 1 100 0 232 341 23 0 chr2 247512719 247512807 -5743776 - MIR SINE MIR -54 208 119 2024 99 17 0 chr2 247513898 247514191 -5742392 + AluSp SINE Alu 1 298 -15 1964 149 3 0 chr2 247515742 247516050 -5740533 - AluSx SINE Alu -3 309 1 23 0 0 0 chr2 247516100 247516123 -5740460 + AT_rich Low_complexity Low_complexity 1 23 0 2188 93 3 7 chr2 247516188 247516498 -5740085 - AluSg SINE Alu -1 309 1 246 273 50 20 chr2 247517846 247517945 -5738638 - L2 LINE L2 -33 3280 3179 470 289 86 0 chr2 247518861 247519058 -5737525 - MIR SINE MIR -35 227 14 572 175 0 0 chr2 247519720 247519817 -5736766 - FLAM_A SINE Alu -9 133 37 264 343 67 14 chr2 247520239 247520449 -5736134 + L2 LINE L2 2949 3169 -144 1231 251 58 23 chr2 247520451 247520938 -5735645 + MLT1G3 LTR MaLR 1 469 -61 2021 135 0 3 chr2 247522938 247523249 -5733334 + AluSx SINE Alu 1 310 -2 15261 113 7 3 chr2 247523471 247524139 -5732444 + L1PA8A LINE L1 2849 3513 -2618 297 0 0 0 chr2 247524139 247524172 -5732411 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 15261 113 7 3 chr2 247524172 247526806 -5729777 + L1PA8A LINE L1 3513 6131 0 2564 185 59 35 chr2 247526806 247527383 -5729200 + L1MB4 LINE L1 5572 6162 -18 1729 185 32 3 chr2 247527406 247527720 -5728863 - MER7A DNA MER2_type -25 321 1 268 331 0 38 chr2 247527734 247527891 -5728692 + A-rich Low_complexity Low_complexity 3 153 0 706 231 57 33 chr2 247529464 247529676 -5726907 + MIR SINE MIR 46 262 0 216 0 0 0 chr2 247529806 247529830 -5726753 + (TG)n Simple_repeat Simple_repeat 2 25 0 571 263 0 8 chr2 247532011 247532144 -5724439 + FLAM_C SINE Alu 2 133 0 295 265 59 66 chr2 247532666 247532805 -5723778 + MIR SINE MIR 58 195 -67 180 77 0 0 chr2 247532972 247532998 -5723585 + (TGGG)n Simple_repeat Simple_repeat 1 26 0 1539 196 25 79 chr2 247533047 247533440 -5723143 + MLT1A2 LTR MaLR 3 374 0 22 0 0 0 chr2 247536001 247536023 -5720560 + AT_rich Low_complexity Low_complexity 1 22 0 196 321 54 96 chr2 247536244 247536484 -5720099 + L2 LINE L2 3042 3271 -1 325 302 54 40 chr2 247537035 247537177 -5719406 + MIR SINE MIR 10 161 -47 235 346 90 26 chr2 247537474 247537818 -5718765 - L3 LINE CR1 -106 1471 1106 324 288 162 11 chr2 247538555 247538746 -5717837 + LTR33 LTR ERVL 65 284 -237 1823 131 11 3 chr2 247539204 247539539 -5717044 + AluJb SINE Alu 1 337 0 2228 56 35 0 chr2 247539577 247539862 -5716721 - AluY SINE Alu -16 295 1 2190 107 0 13 chr2 247541052 247541360 -5715223 - AluSx SINE Alu -7 305 2 433 248 51 8 chr2 247544245 247544362 -5712221 + MIR SINE MIR 66 187 -75 265 220 230 20 chr2 247544367 247544467 -5712116 - L2 LINE L2 -5 3308 3188 229 222 14 56 chr2 247545563 247545635 -5710948 + MLT1H LTR MaLR 60 128 -421 2021 78 36 14 chr2 247545985 247546266 -5710317 + AluSg SINE Alu 1 287 -23 1563 91 62 4 chr2 247546713 247546955 -5709628 - L1MA1 LINE L1 0 6302 6047 370 273 115 48 chr2 247548689 247548854 -5707729 + MIR SINE MIR 17 192 -70 284 200 17 17 chr2 247549147 247549207 -5707376 + MIR SINE MIR 88 147 -61 560 179 0 9 chr2 247549288 247549394 -5707189 + FLAM_A SINE Alu 1 105 -37 250 344 0 17 chr2 247550151 247550331 -5706252 + CT-rich Low_complexity Low_complexity 2 178 0 2083 248 34 28 chr2 247550562 247551191 -5705392 + L1MC4a LINE L1 6083 6240 -2 1197 48 0 0 chr2 247551195 247551340 -5705243 + AluY SINE Alu 156 300 -11 305 291 44 53 chr2 247551543 247551770 -5704813 - L1ME LINE L1 -349 5772 5548 24 32 0 0 chr2 247552022 247552053 -5704530 + AT_rich Low_complexity Low_complexity 1 31 0 1942 115 14 0 chr2 247552545 247552832 -5703751 + AluSp SINE Alu 23 313 0 367 186 71 0 chr2 247553237 247553307 -5703276 + MER5A DNA MER1_type 2 76 -113 1701 174 10 10 chr2 247553309 247553620 -5702963 + AluSx SINE Alu 2 312 0 1023 90 28 0 chr2 247553849 247553980 -5702603 + AluSq/x SINE Alu 1 138 -175 1826 161 7 0 chr2 247553980 247554285 -5702298 + AluSx SINE Alu 1 307 -5 1023 90 28 0 chr2 247554285 247554298 -5702285 + AluSq/x SINE Alu 138 149 -164 403 245 84 28 chr2 247554364 247554507 -5702076 + MIR SINE MIR 42 192 -70 1995 123 0 0 chr2 247554821 247555114 -5701469 - AluSx SINE Alu -19 293 1 1736 162 41 0 chr2 247555824 247556114 -5700469 - AluSx SINE Alu -10 302 1 2324 84 0 3 chr2 247556256 247556567 -5700016 - AluY SINE Alu -1 310 1 459 280 82 74 chr2 247557426 247557998 -5698585 - L2 LINE L2 -3 3310 2714 243 279 106 39 chr2 247559221 247559325 -5697258 - L2 LINE L2 -40 3232 3122 25 31 0 0 chr2 247559362 247559394 -5697189 + AT_rich Low_complexity Low_complexity 1 32 0 265 203 0 31 chr2 247559842 247559906 -5696677 + (CAGAGA)n Simple_repeat Simple_repeat 2 63 0 278 326 52 35 chr2 247560507 247560679 -5695904 - MER5A DNA MER1_type -7 182 8 180 0 0 0 chr2 247560816 247560836 -5695747 + (CAGGC)n Simple_repeat Simple_repeat 5 24 0 930 10 0 0 chr2 247560962 247561065 -5695518 - L1PA5 LINE L1 -13 6141 6039 1509 210 93 17 chr2 247561503 247561922 -5694661 - MLT1C LTR MaLR 0 467 17 2161 103 17 0 chr2 247561924 247562225 -5694358 - AluSx SINE Alu -6 306 1 833 213 0 12 chr2 247562805 247562974 -5693609 - AluJo SINE Alu -59 253 87 358 297 67 48 chr2 247563079 247563244 -5693339 + MIR SINE MIR 2 169 -93 184 293 49 12 chr2 247563796 247563878 -5692705 - MIR SINE MIR -12 250 166 193 271 21 0 chr2 247564273 247564321 -5692262 - L2 LINE L2 -35 3237 3189 618 271 135 22 chr2 247564456 247564685 -5691898 + MIR SINE MIR 2 256 -6 2156 118 0 16 chr2 247565441 247565747 -5690836 + AluSq SINE Alu 1 301 -12 688 206 212 5 chr2 247565838 247566022 -5690561 - MIR SINE MIR -24 238 17 706 261 177 6 chr2 247566858 247567169 -5689414 + L2 LINE L2 2950 3313 0 1158 139 0 22 chr2 247567656 247567836 -5688747 - AluSg/x SINE Alu 0 312 137 393 231 160 76 chr2 247567838 247568063 -5688520 + Charlie8 DNA MER1_type 53 296 -2121 277 240 8 41 chr2 247568420 247568541 -5688042 + (ATG)n Simple_repeat Simple_repeat 3 119 0 687 190 6 11 chr2 247568553 247568732 -5687851 + (TGG)n Simple_repeat Simple_repeat 1 178 0 613 153 0 15 chr2 247568753 247568884 -5687699 + (TGG)n Simple_repeat Simple_repeat 1 129 0 1017 185 24 28 chr2 247569367 247569578 -5687005 - MER6B DNA MER2_type 0 210 1 515 193 28 0 chr2 247570141 247570250 -5686333 + MLT1C LTR MaLR 1 112 -355 195 331 102 8 chr2 247570668 247570795 -5685788 - L2 LINE L2 -706 2608 2470 359 327 117 31 chr2 247570881 247571104 -5685479 - L1ME4a LINE L1 -202 5919 5678 259 211 197 0 chr2 247571345 247571421 -5685162 - L2 LINE L2 -2 3270 3180 21 0 0 0 chr2 247571962 247571983 -5684600 + AT_rich Low_complexity Low_complexity 1 21 0 1992 135 0 7 chr2 247572236 247572517 -5684066 - AluSx SINE Alu -33 279 1 4454 205 52 47 chr2 247574186 247574312 -5682271 - L1MC3 LINE L1 -9 7776 7652 1924 145 24 3 chr2 247574312 247574609 -5681974 - AluSx SINE Alu -5 307 5 4454 205 52 47 chr2 247574609 247575705 -5680878 - L1MC3 LINE L1 -133 7652 6548 21 57 0 0 chr2 247579322 247579357 -5677226 + AT_rich Low_complexity Low_complexity 1 35 0 1367 95 0 16 chr2 247580051 247580240 -5676343 + AluY SINE Alu 116 301 -10 23 33 0 0 chr2 247580892 247580922 -5675661 + AT_rich Low_complexity Low_complexity 1 30 0 243 0 0 0 chr2 247581937 247581964 -5674619 + (TTA)n Simple_repeat Simple_repeat 2 28 0 1684 101 135 0 chr2 247581967 247582204 -5674379 - AluSx SINE Alu -28 284 16 203 172 0 35 chr2 247583890 247583948 -5672635 + T-rich Low_complexity Low_complexity 1 56 0 2335 93 0 13 chr2 247586180 247586482 -5670101 + AluSx SINE Alu 1 298 -14 26 0 0 0 chr2 247586492 247586518 -5670065 + AT_rich Low_complexity Low_complexity 1 26 0 330 315 113 0 chr2 247586956 247587101 -5669482 - MIR SINE MIR -64 144 38 199 270 62 102 chr2 247588393 247588619 -5667964 - L2 LINE L2 -31 3241 3025 182 350 0 0 chr2 247588698 247588758 -5667825 - MIR SINE MIR -59 149 90 500 325 52 0 chr2 247589210 247589401 -5667182 + MIR SINE MIR 23 223 -39 537 316 33 14 chr2 247589651 247589866 -5666717 + MIR SINE MIR 15 233 -29 2317 120 0 0 chr2 247590057 247590358 -5666225 + AluSx SINE Alu 1 301 -11 2176 123 13 0 chr2 247590950 247591252 -5665331 + AluJb SINE Alu 1 306 -6 1773 172 0 10 chr2 247591709 247592011 -5664572 - AluSx SINE Alu -13 299 1 286 323 10 0 chr2 247592296 247592392 -5664191 + MER117 DNA MER1_type 1 97 -100 259 319 54 31 chr2 247592465 247592596 -5663987 - MIR3 SINE MIR -53 155 22 197 351 175 13 chr2 247592983 247593137 -5663446 + MIR3 SINE MIR 17 195 -13 2277 111 6 19 chr2 247593195 247593510 -5663073 - AluSx SINE Alu -1 311 1 1128 96 0 0 chr2 247594929 247595075 -5661508 + AluSg/x SINE Alu 135 280 -30 363 44 0 0 chr2 247595075 247595120 -5661463 + (TGGA)n Simple_repeat Simple_repeat 2 46 0 2320 108 0 0 chr2 247595621 247595926 -5660657 + AluSx SINE Alu 2 306 -6 324 316 71 46 chr2 247597702 247598094 -5658489 - L1M4 LINE L1 -1800 4346 3945 2194 107 3 35 chr2 247598451 247598761 -5657822 - AluSx SINE Alu -12 300 1 1562 201 19 7 chr2 247598847 247599210 -5657373 - AluJb SINE Alu 0 367 1 910 92 0 17 chr2 247599367 247599487 -5657096 - AluSq/x SINE Alu -195 118 1 258 352 128 33 chr2 247600029 247600512 -5656071 - L2 LINE L2 -746 2568 2040 231 289 58 10 chr2 247600551 247600655 -5655928 - MER117 DNA MER1_type -38 159 51 181 143 0 0 chr2 247600716 247600744 -5655839 - L3 LINE CR1 -8 1569 1542 446 301 13 39 chr2 247601313 247601466 -5655117 - L3 LINE CR1 -848 729 581 2229 115 3 3 chr2 247602136 247602432 -5654151 + AluSx SINE Alu 1 296 -16 1463 199 47 7 chr2 247604525 247604801 -5651782 + AluJb SINE Alu 1 287 -25 216 375 45 23 chr2 247604917 247605093 -5651490 - MIR SINE MIR -13 249 70 379 136 17 0 chr2 247606424 247606483 -5650100 + U7 snRNA snRNA 3 62 -1 1420 164 43 72 chr2 247606575 247606880 -5649703 - AluJo SINE Alu -16 296 1 183 156 22 67 chr2 247607477 247607522 -5649061 - L2 LINE L2 -77 3195 3153 285 29 0 0 chr2 247607988 247608022 -5648561 + (TG)n Simple_repeat Simple_repeat 1 34 0 1651 148 32 14 chr2 247608335 247608612 -5647971 + AluJo SINE Alu 1 282 -30 1066 274 69 13 chr2 247608638 247609116 -5647467 + L1ME4a LINE L1 5607 6111 -10 1021 164 6 6 chr2 247609136 247609313 -5647270 + FRAM SINE Alu 1 176 0 503 157 12 0 chr2 247610319 247610402 -5646181 + AluJo SINE Alu 68 151 -161 21 57 0 0 chr2 247610438 247610473 -5646110 + AT_rich Low_complexity Low_complexity 1 35 0 413 312 70 7 chr2 247612021 247612241 -5644342 - MIR SINE MIR -12 250 14 349 347 61 10 chr2 247612264 247612561 -5644022 + L1ME LINE L1 5457 5768 -353 2299 97 21 0 chr2 247612619 247612909 -5643674 + AluSx SINE Alu 3 298 -14 198 0 0 0 chr2 247613940 247613962 -5642621 + (CA)n Simple_repeat Simple_repeat 1 22 0 265 122 0 0 chr2 247614060 247614101 -5642482 - AluJo SINE Alu -18 284 244 1452 191 0 4 chr2 247614136 247614388 -5642195 - AluJo SINE Alu -61 251 1 271 158 20 89 chr2 247614392 247614493 -5642090 + L2 LINE L2 3159 3252 -61 357 315 103 5 chr2 247614538 247614722 -5641861 - MIR SINE MIR 0 262 61 228 310 169 14 chr2 247615444 247615728 -5640855 - L2 LINE L2 -573 2741 2414 1635 143 94 4 chr2 247616021 247616286 -5640297 + AluJo SINE Alu 1 289 -23 2228 103 10 16 chr2 247616765 247617075 -5639508 - AluSx SINE Alu -4 308 1 180 152 0 0 chr2 247622426 247622459 -5634124 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 192 245 0 0 chr2 247623651 247623704 -5632879 + A-rich Low_complexity Low_complexity 1 53 0 2099 133 7 0 chr2 247626292 247626578 -5630005 - AluSx SINE Alu -24 288 1 604 188 145 7 chr2 247627199 247627337 -5629246 + MER5A DNA MER1_type 32 188 -1 2021 213 63 11 chr2 247627529 247628050 -5628533 + L1MB7 LINE L1 3775 4322 -1824 961 183 0 12 chr2 247628050 247628214 -5628369 + FRAM SINE Alu 1 159 -17 792 199 0 0 chr2 247628214 247628345 -5628238 + FLAM_C SINE Alu 1 131 -2 3598 208 61 52 chr2 247628346 247628997 -5627586 + L1MB7 LINE L1 4321 4965 -1219 2094 105 4 0 chr2 247628997 247629264 -5627319 + AluSx SINE Alu 19 286 -26 3598 208 61 52 chr2 247629264 247629580 -5627003 + L1MB7 LINE L1 4965 5277 -907 2001 142 0 29 chr2 247629580 247629896 -5626687 + AluJb SINE Alu 5 311 -1 3598 208 61 52 chr2 247629896 247629949 -5626634 + L1MB7 LINE L1 5277 5328 -856 1759 197 0 3 chr2 247629949 247630259 -5626324 + AluJo SINE Alu 1 309 -3 3598 208 61 52 chr2 247630259 247631044 -5625539 + L1MB7 LINE L1 5328 6160 -24 234 0 0 0 chr2 247631606 247631632 -5624951 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1517 185 26 16 chr2 247631634 247631812 -5624771 - AluJo SINE Alu -1 311 136 287 0 53 0 chr2 247631812 247631850 -5624733 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 2170 108 0 4 chr2 247631850 247632129 -5624454 - AluSg1 SINE Alu -31 278 1 1517 185 26 16 chr2 247632129 247632257 -5624326 - AluJo SINE Alu -175 137 1 2026 113 18 3 chr2 247632268 247632550 -5624033 - AluSq SINE Alu -17 296 11 206 326 23 0 chr2 247632574 247632660 -5623923 - L2 LINE L2 -817 2497 2410 203 298 36 24 chr2 247633258 247633342 -5623241 - MIR SINE MIR -68 140 56 2046 130 0 20 chr2 247633485 247633786 -5622797 + AluSx SINE Alu 9 303 -9 2100 146 7 0 chr2 247635387 247635695 -5620888 - AluSx SINE Alu -2 310 1 788 264 101 14 chr2 247635844 247636120 -5620463 - L1ME2 LINE L1 -9 6155 5856 634 259 40 30 chr2 247636274 247636475 -5620108 + MIR SINE MIR 16 218 -44 2264 119 3 0 chr2 247637159 247637454 -5619129 + AluSx SINE Alu 1 296 -16 518 223 25 0 chr2 247637567 247637688 -5618895 + L1ME1 LINE L1 5530 5653 -468 2776 16 7 0 chr2 247637688 247637991 -5618592 + AluY SINE Alu 1 305 -6 2295 120 0 0 chr2 247638016 247638317 -5618266 + AluSg SINE Alu 1 301 -9 2267 109 0 0 chr2 247638597 247638891 -5617692 - AluSx SINE Alu -16 296 3 2348 207 39 39 chr2 247639549 247640143 -5616440 + L1MB8 LINE L1 5585 6178 0 207 0 0 0 chr2 247641295 247641318 -5615265 + (T)n Simple_repeat Simple_repeat 1 23 0 2283 85 0 17 chr2 247641331 247641626 -5614957 + AluSc SINE Alu 3 292 -17 1485 178 3 73 chr2 247641626 247641929 -5614654 - AluJo SINE Alu -30 282 1 946 227 53 14 chr2 247641988 247642162 -5614421 - MER33 DNA MER1_type -2265 320 129 2264 96 10 3 chr2 247642162 247642464 -5614119 - AluSg SINE Alu -6 304 1 946 227 53 14 chr2 247642464 247642571 -5614012 - MER33 DNA MER1_type -2456 129 28 344 179 24 12 chr2 247643147 247643231 -5613352 + MER20 DNA MER1_type 5 89 -130 701 273 57 25 chr2 247643925 247643942 -5612641 + L1ME1 LINE L1 5869 5884 -282 1815 178 7 0 chr2 247643942 247644234 -5612349 + AluJb SINE Alu 1 294 -18 701 273 57 25 chr2 247644234 247644498 -5612085 + L1ME1 LINE L1 5884 6159 -7 2141 117 17 0 chr2 247645337 247645627 -5610956 + AluSx SINE Alu 1 295 -17 1932 147 3 29 chr2 247645999 247646313 -5610270 + AluJb SINE Alu 7 312 0 435 275 70 63 chr2 247646437 247646493 -5610090 - L1ME2 LINE L1 -236 5885 5831 2400 85 7 0 chr2 247646493 247646788 -5609795 - AluSx SINE Alu -15 297 1 435 275 70 63 chr2 247646788 247647062 -5609521 - L1ME2 LINE L1 -290 5831 5553 1161 220 45 72 chr2 247647171 247647207 -5609376 - MLT2C1 LTR ERVL 0 397 362 333 0 0 0 chr2 247647207 247647244 -5609339 + (TG)n Simple_repeat Simple_repeat 2 38 0 1161 220 45 72 chr2 247647244 247647325 -5609258 - MLT2C1 LTR ERVL -35 362 280 279 79 0 0 chr2 247647325 247647363 -5609220 + (TG)n Simple_repeat Simple_repeat 2 39 0 1161 220 45 72 chr2 247647363 247647648 -5608935 - MLT2C1 LTR ERVL -117 280 5 224 125 472 0 chr2 247648300 247648372 -5608211 - L2 LINE L2 -30 3242 3137 309 277 11 32 chr2 247648391 247648407 -5608176 - L1MCa LINE L1 -4343 2083 2068 1881 128 20 53 chr2 247648407 247648711 -5607872 + AluJo SINE Alu 1 294 -18 309 277 11 32 chr2 247648711 247648788 -5607795 - L1MCa LINE L1 -4358 2068 1992 1398 246 64 14 chr2 247649034 247649469 -5607114 - LTR40b LTR ERVL -5 457 1 1851 160 176 23 chr2 247649777 247650214 -5606369 - MLT1D LTR MaLR -1 504 1 2135 113 0 3 chr2 247651761 247652043 -5604540 + AluSq SINE Alu 1 281 -32 2370 90 10 0 chr2 247652043 247652343 -5604240 + AluSp SINE Alu 1 303 -10 222 191 0 0 chr2 247653059 247653106 -5603477 + (CA)n Simple_repeat Simple_repeat 1 47 0 2157 129 3 3 chr2 247653791 247654093 -5602490 + AluSq SINE Alu 2 303 -10 2559 68 0 10 chr2 247654102 247654410 -5602173 + AluSg SINE Alu 1 305 -5 2120 99 7 0 chr2 247659891 247660205 -5596378 - AluSq SINE Alu 0 316 1 2998 190 72 43 chr2 247660552 247660656 -5595927 + L1MD2 LINE L1 5566 5666 -693 1908 143 13 7 chr2 247660656 247660957 -5595626 + AluJo SINE Alu 1 303 -9 2998 190 72 43 chr2 247660957 247661548 -5595035 + L1MD2 LINE L1 5666 6287 -72 2386 84 3 3 chr2 247661548 247661859 -5594724 - AluY SINE Alu 0 311 1 2998 190 72 43 chr2 247661859 247661924 -5594659 + L1MD2 LINE L1 6287 6349 -10 949 245 106 98 chr2 247661949 247662809 -5593774 + L1MC4 LINE L1 6799 7665 -377 1932 142 73 73 chr2 247662892 247663342 -5593241 - Ricksha DNA DNA -9 3237 2788 674 203 0 16 chr2 247663351 247663474 -5593109 + FLAM_A SINE Alu 11 131 -11 4184 155 53 114 chr2 247663483 247663527 -5593056 - Ricksha DNA DNA -453 2793 2748 1840 156 21 0 chr2 247663527 247663816 -5592767 - AluJb SINE Alu -15 297 3 4184 155 53 114 chr2 247663816 247663971 -5592612 - Ricksha DNA DNA -498 2748 2585 1602 164 7 50 chr2 247663971 247664270 -5592313 + AluJb SINE Alu 3 288 -24 4184 155 53 114 chr2 247664270 247664282 -5592301 - Ricksha DNA DNA -661 2585 2574 1832 149 0 0 chr2 247664282 247664563 -5592020 + AluJb SINE Alu 1 281 -31 891 143 0 0 chr2 247664564 247664697 -5591886 + FLAM_C SINE Alu 1 133 0 4184 155 53 114 chr2 247664697 247665386 -5591197 - Ricksha DNA DNA -672 2574 1845 2073 112 3 3 chr2 247665386 247665680 -5590903 + AluSx SINE Alu 1 294 -18 4184 155 53 114 chr2 247665680 247665733 -5590850 - Ricksha DNA DNA -1401 1845 1790 2068 115 13 16 chr2 247665733 247666047 -5590536 - AluSq SINE Alu 0 313 1 4184 155 53 114 chr2 247666047 247666315 -5590268 - Ricksha DNA DNA -1456 1790 1633 444 83 0 0 chr2 247666305 247666365 -5590218 - Ricksha DNA DNA -1194 60 1 * 1698 87 4 4 chr2 247666549 247666780 -5589803 - AluSc SINE Alu 0 309 79 509 141 0 0 chr2 247666780 247666858 -5589725 + AluS SINE Alu 1 78 -233 2420 176 55 53 chr2 247666858 247667427 -5589156 - L1MB3 LINE L1 -45 6138 5569 1571 163 28 0 chr2 247667462 247667745 -5588838 + AluSx SINE Alu 1 291 -21 1480 145 30 24 chr2 247667778 247668074 -5588509 - AluJo SINE Alu -1 311 14 1706 160 23 10 chr2 247668225 247668532 -5588051 - AluJo SINE Alu -1 311 1 2167 76 10 10 chr2 247668784 247669085 -5587498 + AluY SINE Alu 1 301 -10 443 224 82 45 chr2 247669328 247669368 -5587215 - MER45A DNA AcHobo -1442 139 102 2113 126 0 0 chr2 247669368 247669669 -5586914 + AluSx SINE Alu 1 301 -11 443 224 82 45 chr2 247669669 247669762 -5586821 - MER45A DNA AcHobo -1479 102 1 1995 134 0 16 chr2 247670153 247670460 -5586123 + AluSx SINE Alu 1 302 -10 2119 120 0 16 chr2 247671601 247671737 -5584846 + AluSx SINE Alu 1 138 -174 2430 53 0 3 chr2 247671737 247672039 -5584544 + AluY SINE Alu 1 301 -10 2119 120 0 16 chr2 247672039 247672219 -5584364 + AluSx SINE Alu 138 312 0 312 68 68 0 chr2 247673090 247673149 -5583434 + T-rich Low_complexity Low_complexity 3 65 0 1941 125 10 22 chr2 247673151 247673464 -5583119 - AluSg SINE Alu -1 309 1 198 319 159 0 chr2 247673528 247673641 -5582942 - MIR SINE MIR -12 250 120 2041 92 0 36 chr2 247674207 247674512 -5582071 + AluSg SINE Alu 1 294 -16 1147 228 78 33 chr2 247674973 247675147 -5581436 - MLT1A1 LTR MaLR -18 449 284 2031 61 6 121 chr2 247675147 247675493 -5581090 - AluY SINE Alu -5 306 1 1147 228 78 33 chr2 247675493 247675639 -5580944 - MLT1A1 LTR MaLR -183 284 15 34 0 0 0 chr2 247679006 247679040 -5577543 + AT_rich Low_complexity Low_complexity 1 34 0 358 350 86 0 chr2 247679285 247679448 -5577135 + MER3 DNA MER1_type 32 208 -1 414 222 89 78 chr2 247679681 247679809 -5576774 + MIR SINE MIR 77 209 -53 1685 102 0 185 chr2 247679809 247680171 -5576412 + AluJo SINE Alu 1 295 -7 414 222 89 78 chr2 247680171 247680222 -5576361 + MIR SINE MIR 209 258 -4 1844 201 3 8 chr2 247680390 247680748 -5575835 - MLT1A1 LTR MaLR 0 365 10 1143 214 143 11 chr2 247680845 247681111 -5575472 + AluJo SINE Alu 2 302 0 1689 154 44 7 chr2 247681114 247681407 -5575176 + AluJb SINE Alu 1 304 -8 2187 123 0 0 chr2 247681729 247682039 -5574544 + AluSx SINE Alu 1 310 -2 2223 84 3 3 chr2 247682736 247683034 -5573549 - AluSg SINE Alu -12 298 1 1400 227 55 42 chr2 247684044 247684428 -5572155 - MLT1B LTR MaLR -1 389 1 217 244 64 26 chr2 247684885 247684963 -5571620 - MIR SINE MIR -77 185 105 2058 128 0 3 chr2 247685395 247685701 -5570882 - AluSx SINE Alu -7 305 1 823 139 0 23 chr2 247685707 247685836 -5570747 - AluSp/q SINE Alu -12 301 176 4633 129 6 19 chr2 247685901 247685950 -5570633 - L1PB1 LINE L1 -3 6148 6100 2014 116 10 0 chr2 247685950 247686242 -5570341 - AluSx SINE Alu -17 295 1 4633 129 6 19 chr2 247686242 247686923 -5569660 - L1PB1 LINE L1 -51 6100 5428 2431 80 3 0 chr2 247687971 247688282 -5568301 - AluSx SINE Alu 0 312 1 450 218 245 0 chr2 247689480 247689627 -5566956 - MER5A DNA MER1_type 0 189 7 2352 80 0 0 chr2 247690890 247691191 -5565392 - AluSg SINE Alu -9 301 1 1538 175 54 67 chr2 247691324 247691554 -5565029 - MLT1B LTR MaLR -5 385 160 1288 228 10 7 chr2 247691554 247691843 -5564740 - AluJo SINE Alu -22 290 1 1538 175 54 67 chr2 247691843 247691983 -5564600 - MLT1B LTR MaLR -230 160 20 2246 89 0 7 chr2 247692273 247692575 -5564008 - AluSg SINE Alu -10 300 1 1250 162 4 35 chr2 247692684 247692913 -5563670 - AluJb SINE Alu -30 282 61 381 216 88 34 chr2 247693036 247693184 -5563399 + L1ME4a LINE L1 5939 6094 -27 291 331 24 48 chr2 247697203 247697369 -5559214 - L3 LINE CR1 -803 774 613 196 237 59 35 chr2 247697357 247697462 -5559121 + MIR SINE MIR 37 141 -67 * 186 71 0 0 chr2 247701407 247701435 -5555148 + (T)n Simple_repeat Simple_repeat 1 28 0 2064 130 0 0 chr2 247701887 247702180 -5554403 + AluSx SINE Alu 1 293 -19 1936 133 3 3 chr2 247702568 247702861 -5553722 + AluSx SINE Alu 1 293 -19 493 313 67 38 chr2 247702902 247703247 -5553336 - MLT1J LTR MaLR -49 462 108 376 251 236 18 chr2 247703841 247704227 -5552356 + L1ME4a LINE L1 5628 6097 -24 1982 154 87 0 chr2 247704227 247704559 -5552024 + MER46B DNA MER2_type 1 236 0 1732 151 6 38 chr2 247704731 247704857 -5551726 + AluJo SINE Alu 3 131 -181 2357 94 0 0 chr2 247704857 247705166 -5551417 - AluY SINE Alu -2 309 1 1732 151 6 38 chr2 247705166 247705356 -5551227 + AluJo SINE Alu 131 309 -3 369 0 0 0 chr2 247706632 247706673 -5549910 + (CA)n Simple_repeat Simple_repeat 1 41 0 910 173 51 0 chr2 247706947 247707103 -5549480 - AluJb SINE Alu -142 170 7 288 0 0 0 chr2 247708833 247708865 -5547718 + (TG)n Simple_repeat Simple_repeat 2 33 0 236 287 0 0 chr2 247709376 247709463 -5547120 + (CA)n Simple_repeat Simple_repeat 1 87 0 33 25 0 0 chr2 247711466 247711506 -5545077 + AT_rich Low_complexity Low_complexity 1 40 0 378 0 0 0 chr2 247713304 247713346 -5543237 + (CA)n Simple_repeat Simple_repeat 2 43 0 795 175 7 22 chr2 247714939 247715076 -5541507 + AluJo SINE Alu 2 136 -176 2132 132 3 0 chr2 247715083 247715378 -5541205 - AluSx SINE Alu -15 297 2 374 311 132 47 chr2 247715378 247715613 -5540970 + L1MC4 LINE L1 7596 7850 -192 2292 109 10 3 chr2 247715898 247716202 -5540381 - AluSx SINE Alu -4 308 3 444 236 31 6 chr2 247716476 247716637 -5539946 - Charlie2 DNA MER1_type -3 2859 2695 33 25 0 0 chr2 247716648 247716688 -5539895 + AT_rich Low_complexity Low_complexity 1 40 0 180 0 0 0 chr2 247716770 247716790 -5539793 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 2178 104 0 17 chr2 247716793 247717092 -5539491 - AluSx SINE Alu -18 294 1 1797 142 26 36 chr2 247717130 247717432 -5539151 - AluJo SINE Alu -13 299 1 2141 124 7 10 chr2 247717464 247717771 -5538812 - AluSx SINE Alu -5 307 2 180 0 0 0 chr2 247718916 247718936 -5537647 + (GGCTG)n Simple_repeat Simple_repeat 3 22 0 1359 156 41 0 chr2 247721538 247721756 -5534827 - AluSx SINE Alu -85 227 1 1661 167 51 11 chr2 247721781 247722057 -5534526 - AluJo SINE Alu -21 291 5 2241 98 7 33 chr2 247722280 247722587 -5533996 - AluSx SINE Alu -13 299 1 373 316 48 5 chr2 247722640 247722827 -5533756 - L1MC4 LINE L1 -218 7824 7630 427 285 161 0 chr2 247722924 247723110 -5533473 - L1MC/D LINE L1 -2280 5528 5313 979 141 7 0 chr2 247723115 247723264 -5533319 - FRAM SINE Alu 0 40 1 329 277 96 92 chr2 247723304 247723471 -5533112 - L1MC/D LINE L1 -884 5262 5092 2119 121 0 34 chr2 247723471 247723794 -5532789 + AluSq SINE Alu 1 312 -1 329 277 96 92 chr2 247723794 247723908 -5532675 - L1MC/D LINE L1 -1054 5092 4980 350 295 7 29 chr2 247723979 247724094 -5532489 + L1MC4a LINE L1 5769 5882 -1926 2055 137 7 3 chr2 247724094 247724394 -5532189 + AluJb SINE Alu 1 301 -11 350 295 7 29 chr2 247724394 247724417 -5532166 + L1MC4a LINE L1 5882 5904 -1904 598 283 88 0 chr2 247724497 247724702 -5531881 + L2 LINE L2 2067 2289 -1025 536 284 116 59 chr2 247724724 247725112 -5531471 - MLT1L LTR MaLR -6 609 200 290 236 0 0 chr2 247725083 247725138 -5531445 - MLT1J2 LTR MaLR -324 126 72 * 688 298 142 43 chr2 247725228 247725569 -5531014 + L2 LINE L2 2305 2611 -702 2269 103 7 7 chr2 247725569 247725869 -5530714 + AluSx SINE Alu 1 300 -12 688 298 142 43 chr2 247725869 247726112 -5530471 + L2 LINE L2 2611 2829 -484 189 74 0 0 chr2 247726112 247726139 -5530444 + (CCCCCG)n Simple_repeat Simple_repeat 3 29 0 688 298 142 43 chr2 247726139 247726463 -5530120 + L2 LINE L2 2829 3309 -4 1610 109 52 20 chr2 247727151 247727399 -5529184 + AluSx SINE Alu 41 296 -16 947 177 33 74 chr2 247727699 247727914 -5528669 - MER63A DNA MER1_type 0 210 5 299 277 17 50 chr2 247728321 247728440 -5528143 - MIR SINE MIR -98 164 50 293 278 63 24 chr2 247728571 247728697 -5527886 + L1M4 LINE L1 4068 4198 -1948 320 269 93 47 chr2 247728908 247729165 -5527418 + L1M4 LINE L1 4534 4802 -1344 1926 95 7 72 chr2 247729165 247729299 -5527284 + AluSx SINE Alu 1 142 -165 2367 103 0 0 chr2 247729299 247729609 -5526974 + AluSg SINE Alu 1 310 0 1926 95 7 72 chr2 247729609 247729801 -5526782 + AluSx SINE Alu 142 307 0 218 328 0 0 chr2 247731574 247731638 -5524945 - L3b LINE CR1 -220 1363 1300 27 0 0 0 chr2 247733755 247733782 -5522801 + AT_rich Low_complexity Low_complexity 1 27 0 343 237 21 10 chr2 247734240 247734337 -5522246 + L1M4 LINE L1 4549 4646 -1500 230 234 203 0 chr2 247734444 247734508 -5522075 - MIR SINE MIR -33 229 153 227 222 16 16 chr2 247734510 247734573 -5522010 + MER116 DNA Mariner 6 68 -12 503 273 79 0 chr2 247734573 247734712 -5521871 - MIR SINE MIR -108 154 5 470 320 173 29 chr2 247734717 247735173 -5521410 + L1M4 LINE L1 4807 5328 -818 646 298 68 49 chr2 247735248 247735486 -5521097 - L2 LINE L2 -85 3228 2996 2288 128 0 3 chr2 247735486 247735798 -5520785 + AluSx SINE Alu 1 311 -1 646 298 68 49 chr2 247735798 247736079 -5520504 - L2 LINE L2 -317 2996 2700 636 193 0 86 chr2 247736275 247736415 -5520168 - FLAM_C SINE Alu -1 132 5 696 110 0 0 chr2 247736572 247736672 -5519911 + HY3 scRNA scRNA 1 100 -1 271 282 10 10 chr2 247736692 247736795 -5519788 + L1ME LINE L1 4095 4197 -1949 240 307 101 32 chr2 247736870 247737041 -5519542 + L1P LINE L1 4480 4638 -1508 2126 106 38 3 chr2 247737041 247737334 -5519249 + AluSq SINE Alu 1 303 -10 240 307 101 32 chr2 247737334 247737411 -5519172 + L1P LINE L1 4638 4708 -1438 2571 53 0 3 chr2 247737411 247737710 -5518873 + AluY SINE Alu 1 298 -13 240 307 101 32 chr2 247737710 247737853 -5518730 + L1P LINE L1 4708 4840 -1306 2319 109 3 0 chr2 247737853 247738155 -5518428 - AluSx SINE Alu -9 303 1 240 307 101 32 chr2 247738155 247738289 -5518294 + L1P LINE L1 4840 5051 -1095 1766 171 10 7 chr2 247738305 247738597 -5517986 - AluJb SINE Alu -14 298 6 314 224 59 12 chr2 247738614 247738699 -5517884 + L1ME LINE L1 5145 5233 -913 976 228 24 93 chr2 247738718 247739139 -5517444 + L1ME LINE L1 5270 5661 -501 234 234 285 15 chr2 247739154 247739291 -5517292 + Charlie2 DNA MER1_type 38 211 -2651 381 239 51 0 chr2 247739390 247739508 -5517075 + Charlie2 DNA MER1_type 1854 1981 -881 2183 107 7 7 chr2 247739508 247739806 -5516777 - AluSx SINE Alu -14 298 1 381 239 51 0 chr2 247739806 247739825 -5516758 + Charlie2 DNA MER1_type 1981 1998 -864 22 0 0 0 chr2 247739848 247739870 -5516713 + AT_rich Low_complexity Low_complexity 1 22 0 819 98 23 23 chr2 247739960 247740093 -5516490 + AluSq/x SINE Alu 1 133 -179 2321 91 0 0 chr2 247740225 247740512 -5516071 - AluSx SINE Alu -25 287 1 216 0 0 0 chr2 247741290 247741314 -5515269 + (T)n Simple_repeat Simple_repeat 1 24 0 21 0 0 0 chr2 247743640 247743661 -5512922 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 247743718 247743747 -5512836 + AT_rich Low_complexity Low_complexity 1 29 0 1702 183 35 3 chr2 247744806 247745091 -5511492 - AluSx SINE Alu -18 294 1 1915 171 20 0 chr2 247745174 247745472 -5511111 - AluJb SINE Alu -8 304 1 186 71 0 0 chr2 247745710 247745738 -5510845 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 233 255 0 0 chr2 247745830 247745881 -5510702 + CT-rich Low_complexity Low_complexity 4 54 0 246 193 0 0 chr2 247745898 247745955 -5510628 + CT-rich Low_complexity Low_complexity 6 62 0 1989 169 0 3 chr2 247745960 247746273 -5510310 - AluJb SINE Alu 0 312 1 2821 143 17 2 chr2 247746290 247746710 -5509873 + MSTB LTR MaLR 1 426 0 9538 158 36 19 chr2 247746710 247747091 -5509492 + MSTB-int LTR MaLR 1 374 -1277 2250 139 0 0 chr2 247747091 247747401 -5509182 - AluSx SINE Alu -2 310 1 9538 158 36 19 chr2 247747401 247748643 -5507940 + MSTB-int LTR MaLR 374 1651 0 2666 130 31 26 chr2 247748643 247748838 -5507745 + MSTB LTR MaLR 1 194 -232 2475 81 3 0 chr2 247748838 247749134 -5507449 + AluSx SINE Alu 2 298 -14 2666 130 31 26 chr2 247749134 247749362 -5507221 + MSTB LTR MaLR 194 426 0 323 288 15 45 chr2 247750097 247750229 -5506354 + L2 LINE L2 3143 3270 -2 3291 148 53 53 chr2 247750255 247750593 -5505990 + L1MB2 LINE L1 5476 5813 -358 2367 94 7 0 chr2 247750593 247750902 -5505681 - AluY SINE Alu 0 311 1 3291 148 53 53 chr2 247750902 247750924 -5505659 + L1MB2 LINE L1 5813 5834 -337 1677 177 0 33 chr2 247750924 247751224 -5505359 + AluJb SINE Alu 1 290 -22 3291 148 53 53 chr2 247751224 247751508 -5505075 + L1MB2 LINE L1 5834 6124 -47 2169 98 3 42 chr2 247751508 247751815 -5504768 - AluSg1 SINE Alu -14 295 1 3291 148 53 53 chr2 247751815 247751864 -5504719 + L1MB2 LINE L1 6123 6171 0 22 0 0 0 chr2 247751864 247751886 -5504697 + AT_rich Low_complexity Low_complexity 1 22 0 2044 148 0 7 chr2 247752159 247752463 -5504120 - AluSx SINE Alu -10 302 1 1757 105 0 4 chr2 247752472 247752701 -5503882 - AluSg/x SINE Alu -6 306 79 1863 163 37 0 chr2 247752944 247753238 -5503345 + AluJo SINE Alu 1 305 -7 1960 196 85 2 chr2 247754382 247754781 -5501802 + MSTB1 LTR MaLR 1 432 0 1427 204 145 57 chr2 247754886 247755382 -5501201 - MER74A LTR ERVL 0 558 19 1471 172 26 7 chr2 247755382 247755655 -5500928 + AluJo SINE Alu 1 278 -34 4301 180 57 12 chr2 247756289 247756360 -5500223 + MER6 DNA MER2_type 1 67 -798 1913 91 4 0 chr2 247756360 247756602 -5499981 + AluSp SINE Alu 1 243 -70 263 49 24 0 chr2 247756608 247756649 -5499934 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 4301 180 57 12 chr2 247756649 247756914 -5499669 + MER6 DNA MER2_type 71 323 -542 234 0 0 0 chr2 247756914 247756940 -5499643 + (TGAA)n Simple_repeat Simple_repeat 4 29 0 4301 180 57 12 chr2 247756940 247757423 -5499160 + MER6 DNA MER2_type 323 865 0 183 311 57 57 chr2 247757488 247757610 -5498973 - MIR SINE MIR -71 191 70 2141 139 0 0 chr2 247758366 247758661 -5497922 - AluSx SINE Alu -17 295 1 190 302 0 0 chr2 247759378 247759421 -5497162 + MIR SINE MIR 165 207 -55 784 238 129 44 chr2 247759947 247760397 -5496186 - L1MC5 LINE L1 -160 7801 7314 2170 85 50 0 chr2 247760399 247760681 -5495902 + AluSp SINE Alu 2 297 -16 317 288 102 0 chr2 247761007 247761125 -5495458 - L1ME4a LINE L1 -58 6063 5934 2290 102 7 0 chr2 247761215 247761510 -5495073 - AluSg SINE Alu -13 297 1 443 267 59 41 chr2 247761512 247761705 -5494878 - L1ME4a LINE L1 -745 5401 5208 448 332 5 10 chr2 247761711 247761916 -5494667 - L1ME4a LINE L1 -1990 4156 3953 2399 112 0 0 chr2 247761974 247762279 -5494304 + AluSx SINE Alu 1 305 -7 32 43 0 0 chr2 247762339 247762385 -5494198 + AT_rich Low_complexity Low_complexity 1 46 0 315 354 103 31 chr2 247762548 247762867 -5493716 - L1ME4a LINE L1 -2440 3706 3365 2264 106 0 7 chr2 247762909 247763202 -5493381 + AluSx SINE Alu 1 291 -21 241 270 88 34 chr2 247763203 247763351 -5493232 - LTR33 LTR ERVL -28 493 338 283 319 37 7 chr2 247763413 247763548 -5493035 - LTR33 LTR ERVL -305 216 78 287 267 48 58 chr2 247763598 247763909 -5492674 - L1ME4a LINE L1 -2846 3300 2993 351 65 0 0 chr2 247763950 247763996 -5492587 + (TTCC)n Simple_repeat Simple_repeat 1 46 0 1899 162 10 17 chr2 247763996 247764298 -5492285 - AluJo SINE Alu -12 300 1 1971 119 3 7 chr2 247764802 247765095 -5491488 - AluSx SINE Alu -20 292 1 1508 105 165 4 chr2 247765391 247765639 -5490944 + AluSg1 SINE Alu 9 296 -13 189 0 0 0 chr2 247765639 247765660 -5490923 + (TA)n Simple_repeat Simple_repeat 2 22 0 310 289 135 64 chr2 247766084 247766428 -5490155 - L2 LINE L2 -213 3059 2741 1810 167 0 3 chr2 247766428 247766716 -5489867 + AluJb SINE Alu 1 287 -25 310 289 135 64 chr2 247766716 247766729 -5489854 - L2 LINE L2 -531 2741 2730 273 29 0 0 chr2 247766729 247766763 -5489820 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 310 289 135 64 chr2 247766763 247766944 -5489639 - L2 LINE L2 -542 2730 2497 1743 250 79 122 chr2 247766992 247768523 -5488060 + L2 LINE L2 1834 3311 -2 713 360 76 27 chr2 247768538 247769049 -5487534 - HAL1b LINE L1 -740 608 73 349 221 0 0 chr2 247769122 247769190 -5487393 + MLT1L LTR MaLR 142 209 -406 875 229 26 26 chr2 247769268 247769495 -5487088 + MLT1L LTR MaLR 363 589 -26 1343 232 55 110 chr2 247769513 247770057 -5486526 - LTR33A LTR ERVL -8 515 2 203 256 0 0 chr2 247770788 247770827 -5485756 + polypyrimidine Low_complexity Low_complexity 1 39 0 1588 183 31 0 chr2 247772117 247772407 -5484176 - AluJb SINE Alu -13 299 1 319 317 156 45 chr2 247772408 247773074 -5483509 + L2 LINE L2 2541 3272 0 850 186 0 64 chr2 247773217 247773389 -5483194 - U1 snRNA snRNA -1 164 4 225 284 108 0 chr2 247774816 247774890 -5481693 - L2 LINE L2 -1 3271 3190 1914 149 0 16 chr2 247775457 247775773 -5480810 - AluJo SINE Alu -1 311 1 468 258 140 21 chr2 247776722 247776908 -5479675 - MARNA DNA Mariner -290 296 89 348 243 223 0 chr2 247776973 247777121 -5479462 + MER5A DNA MER1_type 4 184 -5 203 210 0 48 chr2 247778006 247778068 -5478515 + (CCGCG)n Simple_repeat Simple_repeat 5 63 0 2018 105 3 20 chr2 247780359 247780665 -5475918 + AluSx SINE Alu 1 301 -11 272 356 39 0 chr2 247780678 247780782 -5475801 + L2 LINE L2 3201 3308 -5 226 284 113 21 chr2 247781594 247781735 -5474848 + L1ME4a LINE L1 5806 5959 -162 2317 100 0 0 chr2 247781752 247782062 -5474521 + AluY SINE Alu 1 310 -1 35 41 0 0 chr2 247782066 247782115 -5474468 + AT_rich Low_complexity Low_complexity 1 49 0 1765 149 0 20 chr2 247782115 247782411 -5474172 - AluJo SINE Alu -22 290 1 184 254 155 0 chr2 247783854 247783925 -5472658 - MIR SINE MIR -123 139 58 199 244 0 0 chr2 247783991 247784036 -5472547 - L2 LINE L2 -18 3295 3251 216 0 0 0 chr2 247784459 247784483 -5472100 + (CAA)n Simple_repeat Simple_repeat 1 24 0 1819 129 108 18 chr2 247784592 247784924 -5471659 + THE1B LTR MaLR 3 364 0 2181 157 45 40 chr2 247785775 247785973 -5470610 + MSTA LTR MaLR 1 197 -231 2102 110 0 0 chr2 247785973 247786263 -5470320 + AluSx SINE Alu 1 290 -22 2181 157 45 40 chr2 247786263 247786490 -5470093 + MSTA LTR MaLR 197 428 0 3313 202 59 39 chr2 247786794 247787596 -5468987 - L1ME2 LINE L1 -23 6141 5324 212 319 0 33 chr2 247787850 247787941 -5468642 + MIR SINE MIR 49 136 -126 1807 153 31 0 chr2 247788350 247788644 -5467939 - AluJo SINE Alu -5 307 5 190 77 0 51 chr2 247789666 247789705 -5466878 + (GAA)n Simple_repeat Simple_repeat 2 38 0 1485 159 4 0 chr2 247790057 247790321 -5466262 - L1MD3 LINE L1 0 7995 7731 837 258 32 0 chr2 247790643 247790829 -5465754 - MIR SINE MIR -25 237 46 198 267 0 0 chr2 247791123 247791168 -5465415 + L2 LINE L2 3183 3227 -86 779 252 72 9 chr2 247791557 247791779 -5464804 + L1MEc LINE L1 255 490 -5906 1035 242 23 8 chr2 247791898 247792154 -5464429 + L1MEc LINE L1 517 776 -5620 806 181 0 0 chr2 247792197 247792330 -5464253 + AluJo SINE Alu 2 134 -178 1073 281 105 16 chr2 247792330 247792796 -5463787 + L1MEc LINE L1 883 1411 -4985 1921 153 3 0 chr2 247792796 247793103 -5463480 + AluSx SINE Alu 2 309 -3 1073 281 105 16 chr2 247793103 247793209 -5463374 + L1MEc LINE L1 1411 1506 -4890 316 193 0 0 chr2 247793209 247793266 -5463317 + FLAM SINE Alu 71 127 -6 460 220 0 0 chr2 247793273 247793364 -5463219 + L1MEc LINE L1 883 973 -5423 3180 210 32 33 chr2 247793368 247794253 -5462330 + L1M2 LINE L1 1538 2394 -4002 697 260 94 45 chr2 247794254 247794516 -5462067 + MLT1E LTR MaLR 1 275 -318 1376 139 58 121 chr2 247794516 247794846 -5461737 + MLT1A1 LTR MaLR 1 309 -56 750 123 0 0 chr2 247794866 247794972 -5461611 - FLAM_C SINE Alu -36 107 2 5449 233 70 31 chr2 247795008 247797311 -5459272 + L1M2 LINE L1 2470 4888 -1327 2174 249 93 2 chr2 247797311 247797826 -5458757 + REP3 LTR ERV 1 562 0 2273 205 18 51 chr2 247797826 247798395 -5458188 + L1M2 LINE L1 4884 5424 -811 1814 139 108 6 chr2 247798395 247798711 -5457872 + MER7A DNA MER2_type 1 346 0 2273 205 18 51 chr2 247798711 247798778 -5457805 + L1M2 LINE L1 5424 5492 -743 185 293 121 26 chr2 247799170 247799286 -5457297 + L2 LINE L2 1337 1463 -1851 241 341 85 23 chr2 247799305 247799481 -5457102 + L2 LINE L2 1805 1991 -1323 433 363 29 18 chr2 247799797 247800075 -5456508 + L2 LINE L2 2479 2759 -555 975 255 152 35 chr2 247800208 247800544 -5456039 + L1ME4a LINE L1 5549 5967 -154 1992 134 0 3 chr2 247800544 247800851 -5455732 + AluSx SINE Alu 1 306 -6 975 255 152 35 chr2 247800851 247801027 -5455556 + L1ME4a LINE L1 5967 6121 0 280 302 19 14 chr2 247802480 247802598 -5453985 - MIR SINE MIR -101 107 1 425 221 21 0 chr2 247802785 247802880 -5453703 + MER58 DNA MER1_type 40 136 -205 1418 129 0 46 chr2 247802880 247803120 -5453463 - AluSx SINE Alu -83 229 1 1492 166 21 21 chr2 247803120 247803403 -5453180 + AluJo SINE Alu 27 309 -3 2312 70 0 0 chr2 247803404 247803691 -5452892 + AluY SINE Alu 1 287 -24 276 266 38 0 chr2 247805172 247805251 -5451332 + L3 LINE CR1 1282 1363 -214 239 279 15 0 chr2 247805256 247805324 -5451259 + L3 LINE CR1 1289 1357 -220 180 0 0 0 chr2 247806130 247806150 -5450433 + (CA)n Simple_repeat Simple_repeat 2 21 0 237 216 11 57 chr2 247806590 247806678 -5449905 + (TCTCTG)n Simple_repeat Simple_repeat 3 86 0 183 162 0 0 chr2 247807136 247807173 -5449410 + C-rich Low_complexity Low_complexity 3 39 0 494 89 0 36 chr2 247807302 247807414 -5449169 + (CCCCCG)n Simple_repeat Simple_repeat 6 113 0 386 252 10 19 chr2 247808188 247808202 -5448381 - L1MA10 LINE L1 -2 6332 6319 1444 242 72 65 chr2 247808202 247808754 -5447829 - L1ME1 LINE L1 -5 6161 5603 1461 156 51 14 chr2 247808754 247809029 -5447554 + AluJo SINE Alu 1 285 -27 1444 242 72 65 chr2 247809029 247809104 -5447479 - L1ME1 LINE L1 -563 5603 5530 1964 125 3 0 chr2 247809697 247809986 -5446597 - AluSx SINE Alu -22 290 1 203 216 39 20 chr2 247811189 247811240 -5445343 - MIR SINE MIR -123 139 88 193 360 129 27 chr2 247811377 247811671 -5444912 + L2 LINE L2 2926 3249 -23 2084 111 29 10 chr2 247811930 247812236 -5444347 + AluSx SINE Alu 1 312 0 207 0 0 0 chr2 247813164 247813187 -5443396 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 403 328 194 20 chr2 247813602 247813953 -5442630 + L3 LINE CR1 81 492 -1085 704 181 21 75 chr2 247814029 247814170 -5442413 - MER5B DNA MER1_type 0 178 48 2220 117 0 0 chr2 247814170 247814477 -5442106 + AluSx SINE Alu 1 307 -5 704 181 21 75 chr2 247814477 247814523 -5442060 - MER5B DNA MER1_type -130 48 1 210 223 0 149 chr2 247814635 247814729 -5441854 + L3 LINE CR1 714 793 -784 23 0 0 0 chr2 247816600 247816623 -5439960 + AT_rich Low_complexity Low_complexity 1 23 0 1968 122 0 0 chr2 247817846 247818125 -5438458 + AluSx SINE Alu 1 279 -33 378 0 0 0 chr2 247818125 247818167 -5438416 + (CA)n Simple_repeat Simple_repeat 1 42 0 362 216 141 116 chr2 247819141 247819234 -5437349 - MER5C DNA MER1_type 0 324 235 1439 177 62 3 chr2 247819234 247819398 -5437185 - AluJo SINE Alu -7 305 115 261 0 0 0 chr2 247819398 247819427 -5437156 + (TTA)n Simple_repeat Simple_repeat 2 30 0 1439 177 62 3 chr2 247819427 247819550 -5437033 - AluJo SINE Alu -197 115 1 362 216 141 116 chr2 247819550 247819697 -5436886 - MER5C DNA MER1_type -89 235 78 1070 205 54 0 chr2 247819877 247820082 -5436501 - MER58A DNA MER1_type 0 224 9 491 236 75 72 chr2 247820313 247820606 -5435977 - L1MDa LINE L1 -4893 1647 1354 230 321 45 45 chr2 247820611 247820643 -5435940 - MLT1J LTR MaLR -366 145 114 2031 158 97 5 chr2 247820643 247820995 -5435588 + MSTA LTR MaLR 1 394 -34 2218 109 0 0 chr2 247820995 247821307 -5435276 - AluSx SINE Alu 0 312 1 2031 158 97 5 chr2 247821307 247821346 -5435237 + MSTA LTR MaLR 394 428 0 230 321 45 45 chr2 247821346 247821447 -5435136 - MLT1J LTR MaLR -396 115 12 35 0 0 0 chr2 247821857 247821892 -5434691 + AT_rich Low_complexity Low_complexity 1 35 0 208 275 300 25 chr2 247821892 247821904 -5434679 - L2 LINE L2 -1 3271 3264 1627 161 28 3 chr2 247821904 247822190 -5434393 - AluJb SINE Alu -19 293 1 208 275 300 25 chr2 247822190 247822257 -5434326 - L2 LINE L2 -8 3264 3170 228 296 0 0 chr2 247823382 247823436 -5433147 + (TG)n Simple_repeat Simple_repeat 1 54 0 247 299 83 35 chr2 247823511 247823655 -5432928 + MIR3 SINE MIR 7 157 -51 208 280 30 100 chr2 247823697 247823797 -5432786 + MIR3 SINE MIR 74 166 -42 565 294 41 12 chr2 247824166 247824336 -5432247 - MIR3 SINE MIR -25 183 9 225 319 66 22 chr2 247826800 247826891 -5429692 - MIR3 SINE MIR -48 160 66 578 247 55 0 chr2 247827006 247827152 -5429431 - MIR3 SINE MIR -38 170 17 220 265 27 95 chr2 247827188 247827335 -5429248 + L2 LINE L2 2597 2733 -581 2403 113 11 32 chr2 247827537 247827909 -5428674 - THE1B LTR MaLR 0 364 1 419 233 146 46 chr2 247828279 247828498 -5428085 - LTR33 LTR ERVL -241 280 40 380 242 87 78 chr2 247829320 247829551 -5427032 + L1ME LINE L1 5496 5728 -393 1869 203 17 27 chr2 247831112 247831525 -5425058 + MLT2D LTR ERVL 6 414 0 354 355 107 15 chr2 247831842 247832039 -5424544 + MLT1L LTR MaLR 312 526 -89 1814 145 7 13 chr2 247834057 247834361 -5422222 - AluJb SINE Alu -6 306 5 2385 67 0 25 chr2 247834647 247834963 -5421620 - AluY SINE Alu -3 308 1 237 313 15 0 chr2 247835108 247835175 -5421408 - L2 LINE L2 -6 3266 3199 385 281 174 0 chr2 247835197 247835364 -5421219 - MIR SINE MIR -30 232 37 5991 143 10 14 chr2 247835464 247836399 -5420184 + THE1-int LTR MaLR 650 1580 0 1984 136 172 5 chr2 247836399 247836766 -5419817 + MSTA LTR MaLR 1 428 0 560 72 60 12 chr2 247837065 247837148 -5419435 + MER4A LTR ERV1 1 87 -577 1742 124 7 32 chr2 247837188 247837470 -5419113 + MER4A LTR ERV1 372 646 -18 819 78 24 2 chr2 247838398 247838533 -5418050 + MSTA-int LTR MaLR 1446 1635 0 2168 137 132 5 chr2 247838533 247838913 -5417670 + MSTA LTR MaLR 1 428 0 885 227 138 79 chr2 247838926 247839411 -5417172 + MLT1F1 LTR MaLR 42 567 0 946 209 45 100 chr2 247839928 247840021 -5416562 + MLT1B LTR MaLR 1 98 -292 2871 92 51 17 chr2 247840021 247840435 -5416148 - MSTA LTR MaLR 0 428 1 946 209 45 100 chr2 247840435 247840671 -5415912 + MLT1B LTR MaLR 98 312 -78 370 330 107 24 chr2 247840826 247841162 -5415421 + HAL1b LINE L1 303 666 -682 1938 147 0 3 chr2 247841165 247841477 -5415106 + AluSx SINE Alu 1 311 -1 1225 222 32 74 chr2 247841515 247841893 -5414690 + MLT1A1 LTR MaLR 4 365 0 2691 103 54 7 chr2 247842091 247842500 -5414083 + MSTA LTR MaLR 1 428 0 333 292 26 0 chr2 247843035 247843148 -5413435 + L1ME3A LINE L1 4733 4848 -1298 2358 235 85 57 chr2 247843297 247844181 -5412402 + L1ME3A LINE L1 5060 5985 -185 1587 170 13 50 chr2 247844181 247844499 -5412084 + AluJb SINE Alu 1 306 -6 2358 235 85 57 chr2 247844499 247844689 -5411894 + L1ME3A LINE L1 5985 6168 -2 21 36 0 0 chr2 247845240 247845268 -5411315 + AT_rich Low_complexity Low_complexity 1 28 0 327 248 91 77 chr2 247845301 247845505 -5411078 + L1ME4a LINE L1 2678 2878 -3268 1927 130 0 3 chr2 247845505 247845812 -5410771 + AluSx SINE Alu 1 306 0 327 248 91 77 chr2 247845812 247846190 -5410393 + L1ME4a LINE L1 2878 3269 -2877 36 0 0 0 chr2 247846237 247846273 -5410310 + AT_rich Low_complexity Low_complexity 1 36 0 1069 58 0 0 chr2 247846341 247846478 -5410105 + AluY SINE Alu 175 311 0 8644 162 22 59 chr2 247846486 247849279 -5407304 + L1PB2 LINE L1 3174 5844 -307 1993 109 14 3 chr2 247849279 247849563 -5407020 - AluSx SINE Alu -25 287 1 8644 162 22 59 chr2 247849563 247849860 -5406723 + L1PB2 LINE L1 5844 6151 0 423 296 66 56 chr2 247849850 247850242 -5406341 + L1ME4a LINE L1 3714 4109 -2037 * 294 332 0 32 chr2 247850656 247850846 -5405737 + L1ME4a LINE L1 4109 4292 -1854 312 303 66 96 chr2 247850876 247851147 -5405436 + L1ME4a LINE L1 4608 4869 -1277 1246 154 64 111 chr2 247851147 247851524 -5405059 + MLT1A1 LTR MaLR 5 363 -2 312 303 66 96 chr2 247851524 247851585 -5404998 + L1ME4a LINE L1 4869 4930 -1216 363 305 150 9 chr2 247851912 247852125 -5404458 + L1ME4a LINE L1 5310 5552 -2256 644 239 107 13 chr2 247852606 247852840 -5403743 + L1ME4a LINE L1 5727 5982 -139 372 295 132 49 chr2 247853462 247853811 -5402772 - L2 LINE L2 -924 2390 2013 2855 93 0 5 chr2 247854381 247854758 -5401825 - THE1C LTR MaLR 0 375 1 2288 249 108 21 chr2 247856900 247857940 -5398643 - L2 LINE L2 -49 3264 2125 356 85 0 0 chr2 247858301 247858348 -5398235 + Alu SINE Alu 1 47 -261 1163 111 6 0 chr2 247858350 247858522 -5398061 + AluSg/x SINE Alu 131 303 -9 584 223 31 0 chr2 247858530 247858660 -5397923 - L1ME1 LINE L1 -5 6161 6028 272 276 174 0 chr2 247859678 247859776 -5396807 + MIR SINE MIR 31 145 -117 1905 144 0 16 chr2 247860041 247860347 -5396236 + AluJb SINE Alu 1 301 -11 667 271 110 13 chr2 247861075 247861311 -5395272 + MIR SINE MIR 4 262 0 258 297 0 16 chr2 247861441 247861505 -5395078 + MIR SINE MIR 5 67 -195 591 258 70 44 chr2 247861725 247862127 -5394456 + L1MEc LINE L1 656 1031 -5174 * 813 277 88 7 chr2 247862122 247862541 -5394042 + L1MEc LINE L1 1639 2091 -4305 1432 254 44 9 chr2 247862544 247863077 -5393506 + L1MEc LINE L1 2151 2660 -3555 329 239 28 39 chr2 247863083 247863133 -5393450 + L1 LINE L1 5276 5325 -836 2703 141 14 30 chr2 247863133 247863574 -5393009 + Tigger2a DNA MER2_type 1 434 0 329 239 28 39 chr2 247863574 247863656 -5392927 + L1 LINE L1 5325 5404 -757 224 306 28 0 chr2 247864089 247864161 -5392422 - MIR3 SINE MIR -54 154 81 269 151 19 0 chr2 247867641 247867694 -5388889 + CT-rich Low_complexity Low_complexity 3 56 0 1550 137 87 40 chr2 247867694 247867993 -5388590 - AluSq SINE Alu 0 313 1 22 35 0 0 chr2 247868121 247868150 -5388433 + AT_rich Low_complexity Low_complexity 1 29 0 186 87 65 0 chr2 247868157 247868203 -5388380 + (TA)n Simple_repeat Simple_repeat 1 49 0 1404 185 35 25 chr2 247870836 247871122 -5385461 + MLT1C LTR MaLR 8 296 -171 317 323 11 0 chr2 247871166 247871259 -5385324 - MIR SINE MIR -69 193 100 684 267 111 65 chr2 247872486 247872932 -5383651 - HAL1b LINE L1 -617 731 307 3564 120 0 4 chr2 247872932 247873447 -5383136 + MER75 DNA T2_type 1 513 -1 684 267 111 65 chr2 247873447 247873498 -5383085 - HAL1b LINE L1 -1041 307 260 1616 174 3 11 chr2 247873498 247873785 -5382798 - AluJo SINE Alu -27 285 1 684 267 111 65 chr2 247873785 247873933 -5382650 - HAL1b LINE L1 -1088 260 55 1806 140 20 0 chr2 247874132 247874424 -5382159 - AluSx SINE Alu -14 298 1 2527 134 16 60 chr2 247875300 247875554 -5381029 - MSTA LTR MaLR 0 428 201 2149 100 0 31 chr2 247875554 247875874 -5380709 - AluSp SINE Alu -3 310 1 2527 134 16 60 chr2 247875874 247876067 -5380516 - MSTA LTR MaLR -227 201 1 253 267 0 0 chr2 247876191 247876251 -5380332 - L2 LINE L2 -6 3307 3248 2268 242 80 31 chr2 247876557 247877368 -5379215 + L1MC4 LINE L1 6963 7813 -229 1955 123 3 7 chr2 247879265 247879566 -5377017 + AluSx SINE Alu 1 300 -12 181 157 0 39 chr2 247881331 247881382 -5375201 + CT-rich Low_complexity Low_complexity 2 50 0 1477 216 67 42 chr2 247881738 247882094 -5374489 + MLT1A1 LTR MaLR 1 365 0 521 189 11 0 chr2 247882107 247882202 -5374381 + MLT1C LTR MaLR 270 365 0 525 189 11 0 chr2 247882216 247882311 -5374272 + MLT1A1 LTR MaLR 270 365 0 3493 232 60 41 chr2 247882452 247883626 -5372957 - L1M4 LINE L1 -758 6348 5153 901 181 62 18 chr2 247883611 247883837 -5372746 - L1MC3 LINE L1 -7 7778 7543 * 1968 212 43 11 chr2 247883840 247884393 -5372190 - L1M4 LINE L1 -2643 4463 3893 43868 32 23 1 chr2 247884408 247890432 -5366151 - L1PA2 LINE L1 -3 6152 1 2666 255 48 12 chr2 247890439 247891346 -5365237 - L1M4 LINE L1 -3207 3899 2956 1052 203 47 66 chr2 247891554 247891874 -5364709 - L1M4 LINE L1 -6667 363 50 293 271 160 22 chr2 247894556 247894737 -5361846 + MIR SINE MIR 2 207 -55 45 0 0 0 chr2 247894744 247894789 -5361794 + AT_rich Low_complexity Low_complexity 1 45 0 2003 99 53 0 chr2 247895093 247895377 -5361206 + AluSg SINE Alu 1 299 -11 220 234 202 21 chr2 247897552 247897646 -5358937 - L2 LINE L2 -20 3293 3183 184 310 46 0 chr2 247897772 247897859 -5358724 - L2 LINE L2 -339 2974 2884 336 279 31 0 chr2 247897891 247898020 -5358563 - HAL1 LINE L1 -131 2376 2244 225 333 42 8 chr2 247898111 247898231 -5358352 + HAL1 LINE L1 1615 1738 -769 217 268 99 0 chr2 247898634 247898705 -5357878 + L2 LINE L2 3191 3268 -4 297 280 103 9 chr2 247898810 247898917 -5357666 + MIR SINE MIR 140 256 -6 2106 98 3 3 chr2 247899735 247900032 -5356551 - AluSx SINE Alu -15 297 1 195 42 0 0 chr2 247900521 247900545 -5356038 + (TTTC)n Simple_repeat Simple_repeat 2 25 0 1280 159 0 5 chr2 247900551 247900759 -5355824 - AluJo SINE Alu -105 207 1 1075 203 49 36 chr2 247902265 247902570 -5354013 + L1MB5 LINE L1 5748 6056 -118 320 217 42 50 chr2 247903710 247903830 -5352753 - L1MC4 LINE L1 -974 7068 6950 189 107 0 0 chr2 247903862 247903890 -5352693 + (AGGGGG)n Simple_repeat Simple_repeat 1 28 0 239 203 14 0 chr2 247904055 247904129 -5352454 + GA-rich Low_complexity Low_complexity 1 75 0 21 0 0 0 chr2 247904364 247904385 -5352198 + AT_rich Low_complexity Low_complexity 1 21 0 339 130 0 0 chr2 247904904 247904958 -5351625 + (A)n Simple_repeat Simple_repeat 1 54 0 223 243 0 153 chr2 247904958 247905069 -5351514 + MER5B DNA MER1_type 50 143 -35 261 295 125 0 chr2 247905158 247905270 -5351313 - L3 LINE CR1 -335 1242 1117 1881 188 16 22 chr2 247905512 247905879 -5350704 - MLT1A1 LTR MaLR 0 365 1 203 340 68 49 chr2 247906109 247906271 -5350312 - L3 LINE CR1 -1351 226 62 555 192 10 0 chr2 247906427 247906531 -5350052 - Tigger7 DNA MER2_type -1 2490 2386 1152 193 73 9 chr2 247906533 247906751 -5349832 - Tigger7 DNA MER2_type -318 232 1 2389 71 0 0 chr2 247907492 247907787 -5348796 - AluY SINE Alu -16 295 1 758 239 75 11 chr2 247908114 247908302 -5348281 + MLT2B1 LTR ERVL 278 477 -43 263 151 75 0 chr2 247908352 247908405 -5348178 + MLT2B1 LTR ERVL 454 510 -5 1031 156 12 0 chr2 247909851 247910018 -5346565 - AluJ SINE Alu -14 298 130 9333 27 0 0 chr2 247910034 247911113 -5345470 - L1PA3 LINE L1 -1677 4469 3391 7966 16 1 0 chr2 247911113 247912802 -5343781 + L1PA3 LINE L1 4466 6155 0 779 144 8 8 chr2 247912811 247912936 -5343647 - AluJ SINE Alu -186 126 2 356 291 25 19 chr2 247913597 247913755 -5342828 - L2 LINE L2 -617 2697 2539 1288 239 29 6 chr2 247914839 247915186 -5341397 - L1M4 LINE L1 -860 5286 4932 812 138 0 23 chr2 247915232 247915362 -5341221 - AluJ SINE Alu -179 133 7 793 274 99 18 chr2 247916794 247917213 -5339370 - LTR16A LTR ERVL -2 455 2 516 77 0 0 chr2 247917436 247917514 -5339069 + (TA)n Simple_repeat Simple_repeat 1 78 0 1904 131 4 0 chr2 247917515 247917783 -5338800 - AluSx SINE Alu -26 286 18 1135 47 0 0 chr2 247917783 247917910 -5338673 - AluSq/x SINE Alu -185 127 1 6753 45 5 4 chr2 247918301 247919116 -5337467 - L1PA8 LINE L1 0 6172 5357 215 152 22 0 chr2 247919941 247919987 -5336596 + CT-rich Low_complexity Low_complexity 2 48 0 191 250 25 108 chr2 247920616 247920736 -5335847 - L2 LINE L2 -4 3268 3159 * 294 267 30 20 chr2 247920712 247920813 -5335770 + MIR SINE MIR 44 145 -117 491 304 28 0 chr2 247920830 247921011 -5335572 - MIR SINE MIR -21 241 56 1325 155 0 18 chr2 247921348 247921567 -5335016 + AluJb SINE Alu 85 299 -13 1534 78 2 3 chr2 247921666 247921856 -5334727 - L1PA4 LINE L1 -3095 3051 2862 20517 31 6 0 chr2 247921856 247924948 -5331635 + L1PA4 LINE L1 3045 6152 -3 1534 78 2 3 chr2 247924948 247924969 -5331614 - L1P LINE L1 -3284 2862 2842 15911 164 32 17 chr2 247925258 247927329 -5329254 - L1MA9 LINE L1 -10 6190 4150 868 119 0 0 chr2 247927329 247927447 -5329136 - FLAM_C SINE Alu -15 118 1 15911 164 32 17 chr2 247927447 247929506 -5327077 - L1MA9 LINE L1 -2050 4150 2004 1315 208 32 9 chr2 247929511 247929833 -5326750 - L1MA9 LINE L1 -4856 1099 775 243 0 0 0 chr2 247930939 247930966 -5325617 + (CA)n Simple_repeat Simple_repeat 2 28 0 1188 286 114 9 chr2 247931160 247931600 -5324983 - L1MC4a LINE L1 -1880 5928 5443 249 238 12 83 chr2 247931726 247931810 -5324773 + MER58A DNA MER1_type 19 96 -11 3873 197 19 27 chr2 247931811 247931953 -5324630 - L1MB8 LINE L1 -55 6123 5981 2629 139 3 0 chr2 247931953 247932327 -5324256 - THE1C LTR MaLR 0 375 1 3873 197 19 27 chr2 247932327 247933189 -5323394 - L1MB8 LINE L1 -197 5981 5128 1183 276 68 76 chr2 247933194 247935010 -5321573 - L1MC4a LINE L1 -745 5401 3634 22 35 0 0 chr2 247935018 247935047 -5321536 + AT_rich Low_complexity Low_complexity 1 29 0 536 288 52 52 chr2 247935158 247935413 -5321170 - MIR SINE MIR -13 249 5 1033 195 17 48 chr2 247936051 247936178 -5320405 + MER58A DNA MER1_type 1 119 -2301 1828 149 128 15 chr2 247936178 247936514 -5320069 - THE1C LTR MaLR -1 374 1 1033 195 17 48 chr2 247936514 247936617 -5319966 + MER58A DNA MER1_type 119 224 0 407 302 81 37 chr2 247936639 247936937 -5319646 - L1ME LINE L1 -458 5663 5353 234 231 145 8 chr2 247937195 247937312 -5319271 - L1P LINE L1 -1113 5033 4901 334 300 33 11 chr2 247937401 247937571 -5319012 + MIR SINE MIR 22 262 0 8876 21 0 5 chr2 247937685 247939433 -5317150 - L1PA3 LINE L1 -4 6151 4409 5383 25 2 0 chr2 247939433 247940075 -5316508 + L1P LINE L1 2613 3255 -2891 363 252 46 69 chr2 247940141 247940359 -5316224 - L1ME LINE L1 -1525 4621 4409 24 0 0 0 chr2 247940582 247940606 -5315977 + AT_rich Low_complexity Low_complexity 1 24 0 194 375 154 0 chr2 247940659 247940763 -5315820 - L2 LINE L2 -15 3298 3179 237 262 70 87 chr2 247941122 247941294 -5315289 - L1ME LINE L1 -2085 4061 3893 557 198 16 8 chr2 247942574 247942695 -5313888 - Charlie1a DNA MER1_type -4 1451 1330 833 233 0 0 chr2 247942695 247942854 -5313729 + FRAM SINE Alu 1 159 -17 4710 221 62 35 chr2 247942855 247943930 -5312653 - Charlie1a DNA MER1_type -1421 1340 222 5685 91 8 11 chr2 247943930 247945039 -5311544 - L1PA10 LINE L1 -15 6153 5047 4710 221 62 35 chr2 247945039 247945264 -5311319 - Charlie1a DNA MER1_type -2539 222 5 352 236 284 0 chr2 247945309 247945457 -5311126 - L3 LINE CR1 -110 1467 1278 214 347 41 33 chr2 247945521 247945642 -5310941 - L2 LINE L2 0 3313 3192 31 0 0 0 chr2 247946059 247946090 -5310493 + AT_rich Low_complexity Low_complexity 1 31 0 1922 138 0 24 chr2 247946090 247946380 -5310203 - AluSx SINE Alu -27 285 3 520 259 168 50 chr2 247947931 247948151 -5308432 + MLT1C LTR MaLR 18 263 -127 235 81 54 0 chr2 247948148 247948185 -5308398 + Charlie3 DNA MER1_type 2668 2706 -4 * 221 118 0 0 chr2 247948225 247948259 -5308324 - L2 LINE L2 -592 2722 2689 310 299 0 13 chr2 247949037 247949114 -5307469 - L2 LINE L2 -261 3052 2977 318 119 0 68 chr2 247949118 247949177 -5307406 - AluJb SINE Alu -4 296 242 1530 106 0 0 chr2 247949179 247949378 -5307205 - AluJb SINE Alu -113 199 1 279 274 22 44 chr2 247949532 247949597 -5306986 + MER94 DNA DNA 3 68 -66 2461 83 0 0 chr2 247949597 247949898 -5306685 - AluSx SINE Alu -7 305 5 279 274 22 44 chr2 247949898 247949967 -5306616 + MER94 DNA DNA 68 134 0 321 242 101 0 chr2 247949967 247950066 -5306517 - L2 LINE L2 -523 2791 2683 2403 88 0 3 chr2 247951052 247951360 -5305223 - AluSc SINE Alu -2 307 1 334 315 73 0 chr2 247951634 247951799 -5304784 - L1M4 LINE L1 -1494 4652 4476 189 74 0 0 chr2 247952102 247952129 -5304454 + (TA)n Simple_repeat Simple_repeat 2 28 0 295 264 118 9 chr2 247952167 247952277 -5304306 - L2 LINE L2 0 3313 3192 22 0 0 0 chr2 247952300 247952322 -5304261 + AT_rich Low_complexity Low_complexity 1 22 0 224 293 10 91 chr2 247952545 247952644 -5303939 + MIR3 SINE MIR 68 158 -50 24 0 0 0 chr2 247953585 247953609 -5302974 + AT_rich Low_complexity Low_complexity 1 24 0 2325 84 0 7 chr2 247954387 247954684 -5301899 - AluSx SINE Alu -17 295 1 311 310 40 20 chr2 247955573 247955673 -5300910 + MIR SINE MIR 47 148 -60 217 211 58 0 chr2 247955705 247955757 -5300826 + CT-rich Low_complexity Low_complexity 3 57 0 226 372 21 0 chr2 247955991 247956085 -5300498 + MIR SINE MIR 34 129 -79 267 237 16 0 chr2 247956441 247956509 -5300074 + L1ME1 LINE L1 6095 6163 -1 1061 207 35 30 chr2 247956909 247957141 -5299442 - MIR SINE MIR -10 252 20 908 216 9 28 chr2 247957930 247958143 -5298440 - MER3 DNA MER1_type 0 209 1 1383 202 169 38 chr2 247958243 247958688 -5297895 + MLT1D LTR MaLR 1 503 -2 193 180 56 124 chr2 247958690 247958779 -5297804 + MIR SINE MIR 180 262 0 2166 119 3 0 chr2 247959506 247959801 -5296782 + AluSx SINE Alu 1 296 -16 279 237 0 21 chr2 247959968 247960065 -5296518 + L1ME4a LINE L1 5383 5477 -2331 270 320 21 0 chr2 247960216 247960313 -5296270 - L1MC4 LINE L1 -1330 6712 6614 246 200 0 46 chr2 247960281 247960346 -5296237 - L1MCa LINE L1 -4359 2067 2006 * 293 256 0 0 chr2 247960352 247960438 -5296145 - L1MC4 LINE L1 -1342 6700 6615 * 500 231 98 17 chr2 247960428 247960601 -5295982 + L1ME4a LINE L1 5935 6121 0 2100 135 0 3 chr2 247961492 247961796 -5294787 - AluSx SINE Alu -7 305 3 590 232 152 0 chr2 247962435 247962586 -5293997 - MIR SINE MIR -87 175 2 2135 113 3 0 chr2 247963133 247963438 -5293145 + AluSx SINE Alu 2 307 0 22 0 0 0 chr2 247963685 247963707 -5292876 + AT_rich Low_complexity Low_complexity 1 22 0 456 228 0 9 chr2 247963896 247964010 -5292573 - L1MA10 LINE L1 -8 6326 6214 1387 248 85 27 chr2 247964440 247964970 -5291613 - MLT1E LTR MaLR 0 593 1 2158 134 77 55 chr2 247965389 247965806 -5290777 + MSTB LTR MaLR 1 426 0 290 288 177 31 chr2 247967136 247967161 -5289422 - HAL1 LINE L1 -728 1779 1759 2623 149 24 5 chr2 247967161 247967577 -5289006 - MSTB LTR MaLR 0 426 3 290 288 177 31 chr2 247967577 247968009 -5288574 - HAL1 LINE L1 -748 1759 1255 1591 194 21 3 chr2 247968845 247969134 -5287449 - AluJb SINE Alu -18 294 1 1665 93 0 18 chr2 247969932 247970158 -5286425 - AluSg/x SINE Alu 0 312 91 199 277 92 14 chr2 247970189 247970327 -5286256 - MIR3 SINE MIR -63 145 5 22 35 0 0 chr2 247971616 247971645 -5284938 + AT_rich Low_complexity Low_complexity 1 29 0 825 274 28 12 chr2 247971752 247972000 -5284583 - MIR SINE MIR -10 252 1 327 305 40 28 chr2 247972094 247972282 -5284301 - L1ME LINE L1 -535 5586 5386 822 293 0 36 chr2 247972312 247972565 -5284018 - MIR SINE MIR -2 260 17 329 337 37 12 chr2 247973450 247973613 -5282970 - MIR SINE MIR -79 183 17 310 306 66 66 chr2 247973799 247974100 -5282483 - MARNA DNA Mariner -224 362 62 21 0 0 0 chr2 247974728 247974749 -5281834 + AT_rich Low_complexity Low_complexity 1 21 0 4140 152 11 82 chr2 247975573 247976467 -5280116 - L1MA5 LINE L1 -1 6299 5469 2505 141 21 9 chr2 247976471 247976905 -5279678 - L1MA5 LINE L1 -1150 4996 4558 1724 112 119 11 chr2 247977198 247977475 -5279108 - AluSg1 SINE Alu -1 308 2 2013 158 6 3 chr2 247977486 247977797 -5278786 - AluJb SINE Alu 0 312 1 2261 152 60 9 chr2 247977798 247978233 -5278350 - L1MB3 LINE L1 -41 6142 5686 5308 180 25 16 chr2 247978870 247979901 -5276682 + L1MD2 LINE L1 5318 6357 -2 732 122 0 28 chr2 247980020 247980127 -5276456 + FRAM SINE Alu 52 155 -21 543 244 105 0 chr2 247980198 247980370 -5276213 + MIR SINE MIR 36 225 -37 1000 250 79 45 chr2 247980752 247981189 -5275394 + MLT1C LTR MaLR 1 460 -7 2339 97 0 10 chr2 247981667 247981975 -5274608 + AluSc SINE Alu 1 305 -4 351 295 9 27 chr2 247981989 247982101 -5274482 - Charlie7 DNA MER1_type -2502 110 1 2531 134 24 7 chr2 247982154 247982564 -5274019 + MSTA LTR MaLR 1 417 -11 396 204 24 96 chr2 247982661 247982785 -5273798 - MER113 DNA MER1_type? -197 324 193 558 41 0 0 chr2 247982785 247982858 -5273725 + (TTCC)n Simple_repeat Simple_repeat 4 76 0 1968 129 4 0 chr2 247982861 247983133 -5273450 - AluSx SINE Alu -39 273 1 396 204 24 96 chr2 247983133 247983171 -5273412 - MER113 DNA MER1_type? -330 191 170 2035 128 10 7 chr2 247983172 247983470 -5273113 - AluSx SINE Alu -13 299 1 1033 186 6 0 chr2 247983605 247983788 -5272795 + AluJo SINE Alu 1 184 -128 605 195 50 31 chr2 247983789 247983948 -5272635 - L1MB3 LINE L1 -797 5349 5188 668 171 18 0 chr2 247984341 247984452 -5272131 - FRAM SINE Alu -10 166 54 261 83 0 0 chr2 247984607 247984643 -5271940 + (TG)n Simple_repeat Simple_repeat 2 37 0 2389 89 3 0 chr2 247986596 247986887 -5269696 - AluSp SINE Alu -21 292 1 1449 142 130 53 chr2 247987134 247987472 -5269111 - MLT1A1 LTR MaLR -1 364 1 279 228 238 0 chr2 247987655 247987756 -5268827 - MER5A DNA MER1_type -6 183 59 376 235 24 0 chr2 247987768 247987853 -5268730 + MER5A DNA MER1_type 26 112 -77 1276 193 28 0 chr2 247990764 247991007 -5265576 - L1MA5 LINE L1 -222 5932 5676 331 179 15 0 chr2 247991007 247991067 -5265516 + L1MA6 LINE L1 6233 6300 0 1276 193 28 0 chr2 247991067 247991080 -5265503 - L1MA5 LINE L1 -478 5676 5665 375 23 0 0 chr2 247993872 247993916 -5262667 + (TG)n Simple_repeat Simple_repeat 2 45 0 1718 262 86 20 chr2 247994748 247995562 -5261021 + L1MD2 LINE L1 3001 3868 -2278 * 3594 199 62 26 chr2 247995544 247996364 -5260219 + L1MD2 LINE L1 5444 6293 -66 2447 272 83 47 chr2 247996379 247997527 -5259056 + L1ME3A LINE L1 3829 4935 -1235 4950 68 26 5 chr2 247997527 247998185 -5258398 + L1PA10 LINE L1 5486 6157 -11 2447 272 83 47 chr2 247998185 247998318 -5258265 + L1ME3A LINE L1 4935 5062 -1108 279 0 0 0 chr2 247998324 247998355 -5258228 + (TC)n Simple_repeat Simple_repeat 2 32 0 2217 105 0 0 chr2 247998355 247998633 -5257950 - AluSx SINE Alu -23 289 9 2447 272 83 47 chr2 247998633 247999192 -5257391 + L1ME3A LINE L1 5062 5764 -406 2193 100 3 10 chr2 247999192 247999491 -5257092 + AluSc SINE Alu 1 297 -12 2447 272 83 47 chr2 247999491 247999779 -5256804 + L1ME3A LINE L1 5764 6040 -130 267 132 0 0 chr2 247999952 247999990 -5256593 + MSTC LTR MaLR 1 38 -390 199 264 11 28 chr2 248000660 248000842 -5255741 + (TG)n Simple_repeat Simple_repeat 2 180 0 260 270 34 11 chr2 248000858 248000947 -5255636 + (TATG)n Simple_repeat Simple_repeat 1 91 0 298 250 0 13 chr2 248002166 248002242 -5254341 + L2 LINE L2 3192 3266 -6 697 305 18 65 chr2 248003235 248003622 -5252961 + L1MC4a LINE L1 5560 5928 -1880 3429 137 68 6 chr2 248003883 248004402 -5252181 + LTR19B LTR ERV1 1 557 -23 2531 59 0 37 chr2 248004402 248004725 -5251858 - AluY SINE Alu 0 311 1 3429 137 68 6 chr2 248004725 248004751 -5251832 + LTR19B LTR ERV1 557 580 0 843 194 24 62 chr2 248004935 248005146 -5251437 - MER3 DNA MER1_type -5 204 2 192 320 63 57 chr2 248005882 248006057 -5250526 - L3b LINE CR1 -193 1390 1215 202 338 0 13 chr2 248006235 248006312 -5250271 + MIR3 SINE MIR 114 189 -19 230 258 0 16 chr2 248006839 248006901 -5249682 + T-rich Low_complexity Low_complexity 5 65 0 500 343 17 4 chr2 248007503 248007742 -5248841 - L1ME LINE L1 -358 5806 5565 363 291 73 37 chr2 248007754 248007778 -5248805 - L1MEc LINE L1 -860 1630 1608 2292 109 0 0 chr2 248007778 248008082 -5248501 - AluSx SINE Alu -8 304 1 363 291 73 37 chr2 248008082 248008478 -5248105 - L1MEc LINE L1 -882 1608 1168 441 0 0 0 chr2 248008972 248009021 -5247562 + (TG)n Simple_repeat Simple_repeat 2 50 0 1233 125 0 0 chr2 248009039 248009199 -5247384 - AluSx SINE Alu -152 160 1 1080 272 59 68 chr2 248009409 248009434 -5247149 - L1MEc LINE L1 -5011 1108 1084 1966 141 41 0 chr2 248009434 248009724 -5246859 - AluSx SINE Alu -10 302 1 1080 272 59 68 chr2 248009724 248009863 -5246720 - L1MEc LINE L1 -5035 1084 945 1998 80 12 0 chr2 248009863 248010114 -5246469 - AluSp SINE Alu -12 301 48 1080 272 59 68 chr2 248010114 248010629 -5245954 - L1MEc LINE L1 -5174 945 434 236 214 0 0 chr2 248010877 248010919 -5245664 + tRNA-Ser-AGC tRNA tRNA 4 45 -40 272 268 350 0 chr2 248010963 248011008 -5245575 + MIR SINE MIR 51 79 -183 1475 237 43 49 chr2 248011008 248011514 -5245069 - MLT1D LTR MaLR 0 505 3 272 268 350 0 chr2 248011514 248011625 -5244958 + MIR SINE MIR 79 262 0 187 260 40 0 chr2 248011864 248011914 -5244669 - L2 LINE L2 -12 3301 3250 1143 233 5 0 chr2 248012394 248012617 -5243966 + MER58A DNA MER1_type 1 224 0 226 297 59 68 chr2 248015215 248015333 -5241250 + MIR SINE MIR 128 244 -18 396 316 27 32 chr2 248018103 248018290 -5238293 + MLT1J2 LTR MaLR 102 287 -163 405 156 0 0 chr2 248018593 248018670 -5237913 + (CCA)n Simple_repeat Simple_repeat 3 79 0 419 246 83 100 chr2 248018974 248019393 -5237190 + MLT1H1 LTR MaLR 20 431 -111 414 271 66 20 chr2 248019654 248019827 -5236756 - MIR3 SINE MIR -61 147 3 3924 197 34 16 chr2 248021323 248022297 -5234286 - L1M LINE L1 -743 5403 4425 1839 142 24 0 chr2 248022314 248022603 -5233980 - AluSx SINE Alu -16 296 1 332 282 30 30 chr2 248025544 248025675 -5230908 - MIR3 SINE MIR -15 193 63 417 237 45 77 chr2 248028530 248028686 -5227897 - MIR SINE MIR -89 173 23 2864 141 10 23 chr2 248028797 248029281 -5227302 + MER50 LTR ERV1 1 478 -256 353 76 0 0 chr2 248029278 248029327 -5227256 - AluSg/x SINE Alu -42 258 215 * 3732 112 58 31 chr2 248029429 248030045 -5226538 + L1PB1 LINE L1 5519 6151 0 537 265 48 0 chr2 248030792 248030939 -5225644 - MER5B DNA MER1_type -18 160 7 207 285 49 69 chr2 248030987 248031131 -5225452 + L2 LINE L2 2124 2264 -1050 2571 142 0 12 chr2 248031665 248032074 -5224509 + L1PA13 LINE L1 5760 6163 0 205 283 25 58 chr2 248032725 248032845 -5223738 - MIR SINE MIR -59 149 34 381 307 15 45 chr2 248033078 248033280 -5223303 + L3 LINE CR1 1130 1325 -252 419 267 52 15 chr2 248033291 248033426 -5223157 - L2 LINE L2 0 3272 3133 400 297 136 52 chr2 248034967 248035297 -5221286 - L1ME LINE L1 -350 5771 5414 180 0 0 0 chr2 248035819 248035839 -5220744 + (TTCA)n Simple_repeat Simple_repeat 4 23 0 422 242 6 0 chr2 248036372 248036533 -5220050 + (TG)n Simple_repeat Simple_repeat 1 162 0 579 238 36 26 chr2 248037391 248037584 -5218999 + L1MC1 LINE L1 6139 6333 0 261 0 0 0 chr2 248037901 248037930 -5218653 + (TC)n Simple_repeat Simple_repeat 2 30 0 391 217 29 12 chr2 248038754 248038875 -5217708 + MIR SINE MIR 105 227 -35 308 200 42 95 chr2 248039070 248039165 -5217418 - L1MC4 LINE L1 -1340 6702 6613 338 260 82 55 chr2 248039166 248039312 -5217271 - L1MC4 LINE L1 -1339 6703 6554 351 114 30 38 chr2 248039312 248039443 -5217140 + (TA)n Simple_repeat Simple_repeat 2 131 0 360 280 57 6 chr2 248039446 248039589 -5216994 - L1MC4 LINE L1 -1337 6705 6589 186 111 19 37 chr2 248039597 248039651 -5216932 + (TA)n Simple_repeat Simple_repeat 1 53 0 306 227 57 45 chr2 248039651 248039739 -5216844 - L1MC4 LINE L1 -1339 6703 6615 466 154 44 9 chr2 248039755 248040184 -5216399 + (TA)n Simple_repeat Simple_repeat 1 444 0 332 230 10 80 chr2 248040193 248040293 -5216290 + L1MC4 LINE L1 6613 6705 -1337 305 224 22 127 chr2 248040297 248040431 -5216152 + L1MC4 LINE L1 6583 6702 -1340 304 123 27 0 chr2 248040433 248040506 -5216077 + (TA)n Simple_repeat Simple_repeat 1 75 0 374 222 22 44 chr2 248040506 248040596 -5215987 + L1MC4 LINE L1 6616 6703 -1339 38 51 0 0 chr2 248040599 248040658 -5215925 + AT_rich Low_complexity Low_complexity 1 59 0 371 216 46 13 chr2 248040826 248040946 -5215637 - MIR SINE MIR -35 227 105 2041 71 57 20 chr2 248041485 248041781 -5214802 - AluSx SINE Alu -5 307 1 2319 70 0 10 chr2 248043059 248043357 -5213226 - AluY SINE Alu -16 295 1 873 186 10 57 chr2 248043359 248043552 -5213031 - Tigger1 DNA MER2_type -2234 184 1 230 190 152 38 chr2 248044176 248044255 -5212328 - LTR41 LTR ERVL -6 767 680 461 318 111 19 chr2 248044534 248044956 -5211627 + HAL1 LINE L1 373 833 -1674 408 303 0 0 chr2 248044956 248045088 -5211495 + C-rich Low_complexity Low_complexity 1 132 0 767 218 59 64 chr2 248045650 248045870 -5210713 - MER20 DNA MER1_type 0 219 1 355 269 88 21 chr2 248046466 248046638 -5209945 + MIR SINE MIR 22 153 -55 369 86 0 0 chr2 248046654 248046712 -5209871 + (CA)n Simple_repeat Simple_repeat 2 59 0 201 389 3 58 chr2 248048083 248048394 -5208189 + L2 LINE L2 2451 2744 -570 295 346 56 0 chr2 248049595 248049702 -5206881 + L2 LINE L2 3157 3269 -3 2460 149 21 2 chr2 248049997 248050419 -5206164 + L1PA16 LINE L1 5726 6155 -11 6579 57 11 20 chr2 248050556 248051436 -5205147 + L1PA7 LINE L1 5282 6153 -1 21 0 0 0 chr2 248051746 248051767 -5204816 + AT_rich Low_complexity Low_complexity 1 21 0 359 327 200 0 chr2 248051891 248052041 -5204542 + MER5A DNA MER1_type 9 188 -1 185 211 308 0 chr2 248052149 248052201 -5204382 + MIR SINE MIR 48 115 -147 242 276 0 23 chr2 248052353 248052440 -5204143 + MLT1I LTR MaLR 310 394 -15 2186 170 11 11 chr2 248052835 248053206 -5203377 + MLT1C LTR MaLR 97 467 0 393 323 37 43 chr2 248053362 248053523 -5203060 + L2 LINE L2 3111 3270 -2 303 335 82 44 chr2 248053634 248053792 -5202791 - L2 LINE L2 -28 3244 3081 2215 175 18 5 chr2 248054397 248054780 -5201803 - MLT1B LTR MaLR 0 390 3 23 68 0 0 chr2 248055611 248055655 -5200928 + AT_rich Low_complexity Low_complexity 1 44 0 387 308 23 8 chr2 248055902 248056035 -5200548 + L2 LINE L2 1680 1814 -1500 276 276 198 15 chr2 248056635 248056791 -5199792 - MIR SINE MIR -56 206 25 416 61 45 0 chr2 248056860 248056926 -5199657 + AluSc SINE Alu 229 297 -12 382 283 65 81 chr2 248058508 248058755 -5197828 - L1MDa LINE L1 -4440 2100 1858 4468 187 27 27 chr2 248058856 248059615 -5196968 - L1 LINE L1 -3021 4544 3770 2064 126 0 0 chr2 248059615 248059909 -5196674 - AluSx SINE Alu -18 294 1 4468 187 27 27 chr2 248059909 248060324 -5196259 - L1 LINE L1 -3795 3770 3357 322 368 66 0 chr2 248061184 248061336 -5195247 + L1ME LINE L1 5578 5739 -382 337 180 0 16 chr2 248061530 248061591 -5194992 + L1ME4a LINE L1 6058 6117 -4 810 135 29 120 chr2 248061953 248062161 -5194422 - MER53 DNA DNA 0 189 1 380 338 84 49 chr2 248062637 248062900 -5193683 - L2 LINE L2 -445 2869 2598 3004 204 51 71 chr2 248063007 248064063 -5192520 - L1 LINE L1 -1490 4656 3622 1878 143 28 9 chr2 248064069 248064390 -5192193 - Tigger2 DNA MER2_type -14 2704 2378 21 36 0 0 chr2 248066166 248066194 -5190389 + GC_rich Low_complexity Low_complexity 1 28 0 240 0 0 70 chr2 248066342 248066385 -5190198 + (TGGG)n Simple_repeat Simple_repeat 3 42 0 227 203 0 17 chr2 248066388 248066447 -5190136 + (GGGTG)n Simple_repeat Simple_repeat 4 61 0 192 85 0 64 chr2 248066639 248066686 -5189897 + (TA)n Simple_repeat Simple_repeat 1 44 0 484 185 6 38 chr2 248066719 248066876 -5189707 + (TA)n Simple_repeat Simple_repeat 1 152 0 231 173 39 19 chr2 248066944 248066996 -5189587 - LTR66 LTR ERVL -169 441 389 201 317 30 10 chr2 248067454 248067555 -5189028 + MIR SINE MIR 52 154 -108 1629 188 3 31 chr2 248067832 248068151 -5188432 - AluJo SINE Alu -2 310 1 300 274 57 40 chr2 248069026 248069150 -5187433 + L1ME3A LINE L1 4144 4269 -1877 855 287 92 53 chr2 248069278 248069604 -5186979 + L1ME3A LINE L1 4326 4638 -1532 884 189 6 6 chr2 248069604 248069763 -5186820 - FRAM SINE Alu -6 160 2 855 287 92 53 chr2 248069763 248070285 -5186298 + L1ME3A LINE L1 4638 5138 -1032 2557 40 0 10 chr2 248070285 248070582 -5186001 + AluY SINE Alu 1 294 -17 855 287 92 53 chr2 248070582 248071241 -5185342 + L1ME3A LINE L1 5138 5873 -297 399 168 32 0 chr2 248071266 248071361 -5185222 + (TA)n Simple_repeat Simple_repeat 1 98 0 243 0 0 0 chr2 248071363 248071390 -5185193 + (TG)n Simple_repeat Simple_repeat 2 28 0 351 237 56 80 chr2 248071494 248071674 -5184909 + L1ME3A LINE L1 5954 6139 -23 251 274 16 0 chr2 248071713 248071775 -5184808 + GA-rich Low_complexity Low_complexity 3 65 0 231 125 0 0 chr2 248072193 248072233 -5184350 + (TCTCCC)n Simple_repeat Simple_repeat 4 43 0 817 200 87 0 chr2 248073137 248073322 -5183261 + MIR SINE MIR 28 228 -34 333 0 0 0 chr2 248073350 248073387 -5183196 + (CAT)n Simple_repeat Simple_repeat 1 37 0 344 277 61 61 chr2 248073592 248073740 -5182843 + HAL1 LINE L1 1 151 -2356 2154 121 7 3 chr2 248073740 248074038 -5182545 + AluSx SINE Alu 1 299 -13 344 277 61 61 chr2 248074038 248074120 -5182463 + HAL1 LINE L1 150 231 -2276 414 258 107 25 chr2 248074657 248074816 -5181767 - LTR33 LTR ERVL -12 509 338 1903 92 110 3 chr2 248075045 248075327 -5181256 - AluSq SINE Alu -1 312 1 2303 119 92 32 chr2 248076275 248076627 -5179956 + MSTA LTR MaLR 1 381 -47 2129 116 17 0 chr2 248076627 248076920 -5179663 + AluSp SINE Alu 2 299 -14 2303 119 92 32 chr2 248076920 248076971 -5179612 + MSTA LTR MaLR 381 428 0 1931 107 17 14 chr2 248079145 248079434 -5177149 + AluSg SINE Alu 3 292 -18 261 0 0 0 chr2 248079437 248079466 -5177117 + (TA)n Simple_repeat Simple_repeat 1 29 0 284 307 0 42 chr2 248079536 248079792 -5176791 + C-rich Low_complexity Low_complexity 1 245 0 450 0 0 0 chr2 248080308 248080358 -5176225 + (TA)n Simple_repeat Simple_repeat 1 50 0 735 241 41 6 chr2 248081950 248082120 -5174463 + MER63A DNA MER1_type 1 176 -34 1903 111 29 53 chr2 248082276 248082617 -5173966 - THE1B LTR MaLR 0 364 32 894 297 47 43 chr2 248082739 248083465 -5173118 - L1MEd LINE L1 -4864 1255 403 223 297 59 10 chr2 248085610 248085711 -5170872 + MIR SINE MIR 87 192 -70 2184 222 39 17 chr2 248085875 248086394 -5170189 - L1MB7 LINE L1 -8 6176 5647 2586 102 19 8 chr2 248086565 248086936 -5169647 + THE1C LTR MaLR 1 375 0 402 262 127 12 chr2 248087326 248087570 -5169013 + L2 LINE L2 317 588 -2726 1325 276 188 14 chr2 248087594 248088392 -5168191 + L2 LINE L2 1444 2380 -934 466 197 261 37 chr2 248088465 248088653 -5167930 + MIR SINE MIR 33 262 0 183 246 0 0 chr2 248089064 248089121 -5167462 + GA-rich Low_complexity Low_complexity 5 61 0 1233 241 74 3 chr2 248089655 248090007 -5166576 + L1MC4 LINE L1 7283 7659 -383 1034 217 35 32 chr2 248090053 248090412 -5166171 - MER66A LTR ERV1 -40 438 169 502 273 20 8 chr2 248090464 248090709 -5165874 + L1MC4 LINE L1 7715 8042 0 744 228 121 5 chr2 248091550 248091756 -5164827 - L1ME2 LINE L1 0 6164 5935 * 1176 262 56 8 chr2 248091725 248092103 -5164480 - L1ME2 LINE L1 -1224 4922 4527 * 2241 161 18 52 chr2 248092093 248092752 -5163831 - L1MB1 LINE L1 -669 5665 5021 2512 182 64 0 chr2 248092753 248093252 -5163331 + L1MB1 LINE L1 5637 6167 -1 478 218 14 27 chr2 248093286 248093433 -5163150 - L1ME2 LINE L1 -1597 4549 4405 242 186 0 34 chr2 248093570 248093629 -5162954 + G-rich Low_complexity Low_complexity 6 62 0 273 187 0 0 chr2 248093648 248093723 -5162860 + G-rich Low_complexity Low_complexity 1 75 0 1976 218 60 24 chr2 248094469 248095318 -5161265 + L1ME2 LINE L1 4728 5616 -548 2324 135 25 0 chr2 248095318 248095673 -5160910 + THE1B LTR MaLR 1 364 0 1976 218 60 24 chr2 248095673 248095714 -5160869 + L1ME2 LINE L1 5616 5654 -510 319 162 0 0 chr2 248095714 248095773 -5160810 + Alu SINE Alu 1 44 -258 2231 123 3 0 chr2 248095773 248096083 -5160500 + AluSx SINE Alu 1 311 -1 1080 176 33 60 chr2 248096083 248096109 -5160474 + L1ME2 LINE L1 5651 5676 -490 189 0 0 0 chr2 248096109 248096130 -5160453 + (GA)n Simple_repeat Simple_repeat 2 22 0 1080 176 33 60 chr2 248096130 248096429 -5160154 + L1ME2 LINE L1 5676 5960 -206 843 159 0 125 chr2 248096478 248096686 -5159897 + MER53 DNA DNA 7 188 -1 407 243 65 18 chr2 248098316 248098485 -5158098 + MIR SINE MIR 68 244 -18 191 169 17 68 chr2 248098619 248098678 -5157905 - MIR SINE MIR -81 181 126 533 278 53 0 chr2 248100364 248100551 -5156032 + MER69 DNA AcHobo 51 247 -2279 249 273 45 0 chr2 248100546 248100634 -5155949 + MER69 DNA AcHobo 2435 2526 0 * 270 191 287 7 chr2 248100704 248100840 -5155743 - LTR33 LTR ERVL -336 185 12 869 209 92 41 chr2 248101858 248102450 -5154133 - LTR41 LTR ERVL -17 756 9 194 311 47 54 chr2 248102466 248102614 -5153969 - L3 LINE CR1 -7 1570 1424 569 270 161 47 chr2 248102965 248103306 -5153277 + MLT1K LTR MaLR 191 570 -18 1889 177 141 20 chr2 248103824 248104206 -5152377 + MLT1D LTR MaLR 3 448 -57 2139 126 3 0 chr2 248104206 248104508 -5152075 - AluSx SINE Alu -9 303 1 1889 177 141 20 chr2 248104508 248104572 -5152011 + MLT1D LTR MaLR 448 503 -2 1517 228 139 11 chr2 248104576 248104774 -5151809 + L1MC4 LINE L1 6450 6621 -1421 240 35 0 0 chr2 248104774 248104803 -5151780 + (TG)n Simple_repeat Simple_repeat 1 29 0 1517 228 139 11 chr2 248104803 248105042 -5151541 + L1MC4 LINE L1 6621 6943 -1099 1820 105 47 36 chr2 248105142 248105419 -5151164 - AluSc SINE Alu -29 280 1 803 268 104 18 chr2 248105440 248105776 -5150807 - L1ME3 LINE L1 -268 5894 5530 212 277 0 0 chr2 248105777 248105842 -5150741 + MIR SINE MIR 92 156 -106 221 292 0 0 chr2 248106953 248107001 -5149582 + polypyrimidine Low_complexity Low_complexity 4 51 0 2296 100 0 0 chr2 248108249 248108540 -5148043 - AluSq SINE Alu -22 291 1 2655 108 28 0 chr2 248110257 248110610 -5145973 + THE1B LTR MaLR 2 364 0 292 318 56 0 chr2 248110984 248111091 -5145492 + MER94 DNA DNA 22 134 0 1762 172 87 8 chr2 248111381 248111748 -5144835 - MSTD LTR MaLR 0 396 1 454 136 8 34 chr2 248112309 248112427 -5144156 + (TA)n Simple_repeat Simple_repeat 2 116 0 6936 180 39 12 chr2 248112547 248114641 -5141942 - L1M1 LINE L1 -4066 1262 14 400 193 16 64 chr2 248114888 248115075 -5141508 + (TATATG)n Simple_repeat Simple_repeat 3 180 0 424 289 97 58 chr2 248115130 248115541 -5141042 - L1ME4a LINE L1 -154 5967 5541 26 30 0 0 chr2 248115577 248115610 -5140973 + AT_rich Low_complexity Low_complexity 1 33 0 766 180 11 45 chr2 248115637 248115815 -5140768 + MER104 DNA MER2_type 5 176 -4 2357 149 11 0 chr2 248115921 248116290 -5140293 - L1MB2 LINE L1 -4 6167 5795 400 300 109 33 chr2 248117940 248118150 -5138433 + LTR16B LTR ERVL 237 462 -2 315 171 11 23 chr2 248118355 248118443 -5138140 + (TA)n Simple_repeat Simple_repeat 2 88 0 259 354 183 4 chr2 248118735 248118964 -5137619 + L3 LINE CR1 1197 1466 -111 2514 200 103 2 chr2 248119026 248119561 -5137022 + MLT1E LTR MaLR 5 593 0 351 216 14 34 chr2 248120979 248121127 -5135456 + G-rich Low_complexity Low_complexity 3 147 0 238 200 62 15 chr2 248121556 248121621 -5134962 + MIR SINE MIR 89 156 -106 2123 104 7 3 chr2 248122848 248123145 -5133438 - AluSx SINE Alu -11 301 4 529 245 35 7 chr2 248123490 248123633 -5132950 + HAL1b LINE L1 201 347 -1001 462 221 142 16 chr2 248123639 248123766 -5132817 + HAL1b LINE L1 398 540 -808 591 274 112 42 chr2 248123811 248124070 -5132513 - MLT1L LTR MaLR -24 591 315 280 174 0 58 chr2 248124224 248124293 -5132290 + HAL1b LINE L1 585 649 -699 345 293 101 43 chr2 248124413 248124524 -5132059 - MIR SINE MIR -12 250 147 1808 73 4 9 chr2 248124524 248124756 -5131827 - AluSq SINE Alu -18 295 65 345 293 101 43 chr2 248124756 248124852 -5131731 - MIR SINE MIR -115 147 31 224 288 63 36 chr2 248125377 248125488 -5131095 - L3 LINE CR1 -104 1473 1360 1936 116 30 30 chr2 248125518 248125819 -5130764 - AluSp SINE Alu -12 301 1 635 331 191 14 chr2 248126199 248126640 -5129943 - L3 LINE CR1 -834 743 225 1974 179 33 10 chr2 248128104 248128494 -5128089 + L1MB4 LINE L1 5757 6155 -25 497 149 21 0 chr2 248129570 248129664 -5126919 + CT-rich Low_complexity Low_complexity 1 96 0 1326 78 0 0 chr2 248129777 248129807 -5126776 + (TTTC)n Simple_repeat Simple_repeat 1 210 0 1326 78 0 0 chr2 248129807 248129987 -5126596 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2171 91 4 0 chr2 248129998 248130273 -5126310 - AluSq SINE Alu -37 276 1 209 287 46 23 chr2 248130273 248130360 -5126223 + MIR SINE MIR 63 151 -111 301 229 16 0 chr2 248131221 248131282 -5125301 + MIR SINE MIR 156 217 -45 918 148 56 14 chr2 248132249 248132391 -5124192 + FRAM SINE Alu 4 151 -15 2254 113 0 0 chr2 248132650 248132951 -5123632 - AluSx SINE Alu -11 301 1 1739 254 76 52 chr2 248133284 248133559 -5123024 - L1ME3A LINE L1 -6 6233 5966 2762 155 0 29 chr2 248133559 248134005 -5122578 - Tigger2a DNA MER2_type 0 434 2 1739 254 76 52 chr2 248134005 248134402 -5122181 - L1ME3A LINE L1 -273 5966 5545 1827 138 3 69 chr2 248134440 248134773 -5121810 - MER1B DNA MER1_type 0 339 29 1140 275 32 30 chr2 248134795 248135341 -5121242 - L1ME3A LINE L1 -737 5502 4961 964 162 0 0 chr2 248135345 248135493 -5121090 + AluJb SINE Alu 155 302 -10 223 143 18 18 chr2 248135494 248135550 -5121033 + GA-rich Low_complexity Low_complexity 1 56 0 351 154 0 0 chr2 248135665 248135730 -5120853 + GA-rich Low_complexity Low_complexity 1 65 0 240 91 0 0 chr2 248135730 248135763 -5120820 + (GGAA)n Simple_repeat Simple_repeat 2 34 0 253 238 25 25 chr2 248135763 248135843 -5120740 - L1ME3A LINE L1 -1244 4971 4892 * 2355 234 91 3 chr2 248135841 248136555 -5120028 - L1ME3A LINE L1 -2200 4015 3239 1196 225 30 56 chr2 248136564 248137007 -5119576 - MLT1E LTR MaLR -3 590 130 240 310 63 35 chr2 248137013 248137155 -5119428 - L1ME3A LINE L1 -6210 186 41 1203 252 64 0 chr2 248138341 248138670 -5117913 - MLT1E1 LTR MaLR 0 654 305 486 222 44 15 chr2 248138679 248138814 -5117769 - MLT1E1 LTR MaLR -515 139 1 372 242 0 0 chr2 248139430 248139525 -5117058 + (TCCA)n Simple_repeat Simple_repeat 4 98 0 258 225 139 35 chr2 248139564 248139737 -5116846 - L2 LINE L2 -46 3267 3077 236 254 98 40 chr2 248139903 248140076 -5116507 - L1ME LINE L1 -532 5589 5407 874 272 96 15 chr2 248140239 248140543 -5116040 + LTR16C LTR ERVL 148 489 -2 307 221 62 0 chr2 248142968 248143052 -5113531 + MIR SINE MIR 20 111 -97 219 130 43 0 chr2 248143106 248143152 -5113431 + (TAGA)n Simple_repeat Simple_repeat 3 50 0 2077 111 77 17 chr2 248143184 248143536 -5113047 + THE1C LTR MaLR 1 373 -2 261 284 42 0 chr2 248143946 248144041 -5112542 - L1MDa LINE L1 -3978 2562 2464 2801 6 3 10 chr2 248146057 248146369 -5110214 + AluYa5 SINE Alu 1 310 -1 4144 137 59 25 chr2 248146429 248147109 -5109474 - MER44D DNA MER2_type 0 705 3 204 246 0 0 chr2 248147267 248147336 -5109247 + (CA)n Simple_repeat Simple_repeat 2 70 0 457 245 165 5 chr2 248147921 248148109 -5108474 - MIR SINE MIR -15 247 30 1971 153 66 45 chr2 248151110 248151490 -5105093 + MLT1B LTR MaLR 3 390 0 201 371 98 23 chr2 248151545 248151677 -5104906 - L2 LINE L2 -182 3090 2949 189 333 13 0 chr2 248152408 248152483 -5104100 - L2 LINE L2 -904 2410 2335 426 328 113 28 chr2 248152762 248152939 -5103644 - L2 LINE L2 -1 3271 3080 564 291 130 21 chr2 248153829 248154163 -5102420 - MLT1I LTR MaLR -19 390 15 295 305 182 5 chr2 248154862 248155049 -5101534 + MIR SINE MIR 32 251 -11 185 111 56 0 chr2 248155222 248155258 -5101325 - L2 LINE L2 -1 3271 3234 318 144 0 184 chr2 248155746 248155832 -5100751 + L1MC4a LINE L1 6553 6611 -1197 393 22 0 0 chr2 248155832 248155878 -5100705 + (TG)n Simple_repeat Simple_repeat 2 47 0 318 144 0 184 chr2 248155878 248155916 -5100667 + L1MC4a LINE L1 6611 6654 -1154 197 297 59 50 chr2 248156044 248156145 -5100438 - L2 LINE L2 -96 3176 3075 22 0 0 0 chr2 248156880 248156902 -5099681 + AT_rich Low_complexity Low_complexity 1 22 0 288 342 40 13 chr2 248156924 248157073 -5099510 - MIR SINE MIR -76 186 34 784 210 26 51 chr2 248157314 248157585 -5098998 - THE1B LTR MaLR 0 364 104 233 162 10 101 chr2 248157940 248158039 -5098544 + MER53 DNA DNA 93 182 -7 * 358 171 14 0 chr2 248157985 248158055 -5098528 - MER53 DNA DNA -118 71 1 189 296 257 20 chr2 248158065 248158217 -5098366 - MIR SINE MIR -58 204 17 1319 93 56 51 chr2 248158438 248158654 -5097929 + MER20 DNA MER1_type 1 217 -2 213 39 0 0 chr2 248158792 248158818 -5097765 + (TA)n Simple_repeat Simple_repeat 2 27 0 8179 103 4 9 chr2 248159381 248160599 -5095984 + L1P LINE L1 1986 3197 -2949 1394 107 5 10 chr2 248160699 248160905 -5095678 - L1P3 LINE L1 -6254 207 3 1537 187 0 26 chr2 248161031 248161341 -5095242 + AluJo SINE Alu 1 302 -10 237 178 0 0 chr2 248163615 248163660 -5092923 + (TGG)n Simple_repeat Simple_repeat 1 45 0 207 69 0 0 chr2 248163662 248163691 -5092892 + (GA)n Simple_repeat Simple_repeat 1 29 0 639 193 15 0 chr2 248163885 248164020 -5092563 + L1MB1 LINE L1 5814 5950 -218 * 3029 180 21 3 chr2 248164012 248164883 -5091700 - L1P4 LINE L1 -563 5603 4721 1385 161 0 29 chr2 248164881 248165123 -5091460 + L1P4 LINE L1 5581 5815 -351 * 2251 233 63 33 chr2 248165243 248166213 -5090370 + L1MEc LINE L1 2179 3157 -3058 375 284 34 54 chr2 248166223 248166427 -5090156 + L1MEc LINE L1 3292 3491 -2724 552 196 53 34 chr2 248166690 248166888 -5089695 + MLT1E1 LTR MaLR 5 260 -394 1205 232 16 0 chr2 248166933 248167179 -5089404 + MLT1E1 LTR MaLR 405 654 0 826 241 20 0 chr2 248167262 248167457 -5089126 - MLT1B LTR MaLR 0 390 192 4853 57 1 0 chr2 248167531 248168184 -5088399 + L1P LINE L1 4197 4850 -1296 413 303 53 0 chr2 248168349 248168537 -5088046 - L1MCc LINE L1 -4891 1532 1335 679 271 85 25 chr2 248168554 248168790 -5087793 - L1MCc LINE L1 -5200 1223 974 1170 319 70 17 chr2 248168888 248169477 -5087106 - L1MCc LINE L1 -5753 670 51 231 157 113 43 chr2 248169491 248169606 -5086977 - Charlie7 DNA MER1_type -47 2565 2443 312 330 63 58 chr2 248170437 248170643 -5085940 + HAL1b LINE L1 146 352 -996 496 319 46 25 chr2 248171889 248172130 -5084453 + MIR SINE MIR 15 260 -2 1826 78 4 4 chr2 248174881 248175137 -5081446 - L1PA10 LINE L1 -6 6162 5907 583 186 192 12 chr2 248178561 248178733 -5077850 - MER3 DNA MER1_type -6 203 1 1538 239 48 21 chr2 248179190 248179626 -5076957 - MLT1C LTR MaLR -18 449 2 303 301 131 42 chr2 248179639 248180067 -5076516 + LTR33 LTR ERVL 47 512 -9 1099 219 7 49 chr2 248180539 248180826 -5075757 - MLT1B LTR MaLR 0 390 116 719 197 42 16 chr2 248180863 248181150 -5075433 - MLT1B LTR MaLR 0 390 2 181 250 62 16 chr2 248181835 248181899 -5074684 + L2 LINE L2 3205 3271 -1 1500 215 60 27 chr2 248182559 248182743 -5073840 - MLT1B LTR MaLR -11 379 202 234 0 0 0 chr2 248182743 248182769 -5073814 + (TG)n Simple_repeat Simple_repeat 1 26 0 1500 215 60 27 chr2 248182769 248182951 -5073632 - MLT1B LTR MaLR -188 202 1 212 219 0 0 chr2 248183010 248183066 -5073517 + MIR SINE MIR 60 116 -92 264 324 65 0 chr2 248184457 248184565 -5072018 + MLT1G1 LTR MaLR 1 115 -480 2449 89 0 10 chr2 248184845 248185159 -5071424 - AluY SINE Alu 0 311 1 208 196 43 0 chr2 248189854 248189900 -5066683 + MIR SINE MIR 102 149 -113 708 228 74 14 chr2 248190017 248190232 -5066351 + MER45C DNA AcHobo 1 228 -725 565 253 253 0 chr2 248190275 248190469 -5066114 + MER45C DNA AcHobo 711 953 0 973 278 51 41 chr2 248190597 248191011 -5065572 - MLT1C LTR MaLR -8 459 42 309 236 28 0 chr2 248191354 248191426 -5065157 - L2 LINE L2 -5 3308 3235 376 391 36 8 chr2 248191705 248191958 -5064625 + L1MC4a LINE L1 5696 5955 -1853 247 200 40 53 chr2 248191999 248192074 -5064509 + L1ME4a LINE L1 5952 6025 -96 372 241 0 0 chr2 248193204 248193283 -5063300 + L3 LINE CR1 1386 1464 -113 216 306 74 0 chr2 248193298 248193406 -5063177 + L2 LINE L2 3157 3272 0 1690 219 53 49 chr2 248193514 248194006 -5062577 - MLT1D LTR MaLR -6 499 6 309 283 0 22 chr2 248194193 248194285 -5062298 + L2 LINE L2 3181 3270 -2 195 200 111 0 chr2 248195304 248195349 -5061234 - L2 LINE L2 0 3313 3264 310 314 48 33 chr2 248198005 248198215 -5058368 + L3 LINE CR1 603 815 -762 1973 164 0 3 chr2 248198678 248198988 -5057595 - AluJo SINE Alu -3 309 1 251 315 11 0 chr2 248199453 248199545 -5057038 + L3 LINE CR1 1427 1519 -58 353 349 36 26 chr2 248202042 248202234 -5054349 + L2 LINE L2 3120 3313 0 293 319 65 30 chr2 248202656 248202825 -5053758 + MIR SINE MIR 56 230 -32 1046 235 187 23 chr2 248204548 248204982 -5051601 - MLT1D LTR MaLR 0 505 1 216 0 0 0 chr2 248205929 248205953 -5050630 + (T)n Simple_repeat Simple_repeat 1 24 0 306 311 33 0 chr2 248206446 248206536 -5050047 - MIR SINE MIR -16 246 154 372 264 65 13 chr2 248207364 248207519 -5049064 - L1MD3 LINE L1 -304 7691 7529 180 231 0 0 chr2 248207762 248207814 -5048769 + G-rich Low_complexity Low_complexity 2 53 0 1251 246 95 78 chr2 248208114 248208157 -5048426 - L1M4 LINE L1 -1784 4362 4321 2216 86 57 0 chr2 248208157 248208436 -5048147 - AluSx SINE Alu -17 295 1 1251 246 95 78 chr2 248208436 248209086 -5047497 - L1M4 LINE L1 -1825 4321 3657 690 269 71 3 chr2 248209065 248209273 -5047310 - L1ME LINE L1 -430 5740 5521 * 402 231 11 0 chr2 248209277 248209368 -5047215 + MER5C DNA MER1_type 31 122 -202 251 274 55 0 chr2 248209493 248209566 -5047017 + MER5C DNA MER1_type 248 324 0 514 263 53 18 chr2 248209567 248209738 -5046845 - L1ME LINE L1 -630 5534 5358 620 316 127 14 chr2 248209911 248210265 -5046318 - L2 LINE L2 -1 3312 2919 926 248 106 45 chr2 248210622 248211121 -5045462 + MER51C LTR ERV1 1 640 0 442 293 94 16 chr2 248211121 248211312 -5045271 + LTR16A1 LTR ERVL 235 440 -17 493 338 40 5 chr2 248211402 248211603 -5044980 + MIR SINE MIR 12 219 -43 1692 198 154 5 chr2 248211938 248212387 -5044196 + MER34 LTR ERV1 27 542 0 406 234 64 8 chr2 248213095 248213333 -5043250 + MER34 LTR ERV1 27 390 -152 499 28 0 28 chr2 248213334 248213405 -5043178 + (TTCC)n Simple_repeat Simple_repeat 3 71 0 386 179 30 8 chr2 248213423 248213557 -5043026 + CT-rich Low_complexity Low_complexity 1 137 0 413 104 13 0 chr2 248213572 248213649 -5042934 + (TTCC)n Simple_repeat Simple_repeat 1 78 0 2037 84 35 7 chr2 248213650 248213935 -5042648 - AluSg SINE Alu -17 293 1 678 164 129 0 chr2 248213935 248214075 -5042508 + MER34 LTR ERV1 385 542 0 368 254 7 21 chr2 248214491 248214633 -5041950 + G-rich Low_complexity Low_complexity 4 143 0 204 40 0 0 chr2 248217472 248217497 -5039086 + (TTTC)n Simple_repeat Simple_repeat 2 26 0 216 0 0 0 chr2 248218246 248218270 -5038313 + (A)n Simple_repeat Simple_repeat 1 24 0 288 91 0 0 chr2 248219788 248219832 -5036751 + (CA)n Simple_repeat Simple_repeat 2 45 0 459 155 0 33 chr2 248222038 248222219 -5034364 + (TG)n Simple_repeat Simple_repeat 2 176 0 180 176 0 33 chr2 248222233 248222324 -5034259 + (TG)n Simple_repeat Simple_repeat 1 88 0 277 312 91 15 chr2 248222324 248222523 -5034060 - L1MC4a LINE L1 -1914 5894 5681 227 328 222 6 chr2 248225567 248225747 -5030836 - MIR SINE MIR -14 248 30 234 81 0 0 chr2 248228680 248228717 -5027866 + (TA)n Simple_repeat Simple_repeat 2 38 0 344 345 23 29 chr2 248232617 248232788 -5023795 + MIR SINE MIR 74 243 -19 807 214 18 0 chr2 248232934 248233102 -5023481 + MER20 DNA MER1_type 7 177 -42 1336 152 99 78 chr2 248233103 248233523 -5023060 + THE1B LTR MaLR 1 364 0 251 318 112 45 chr2 248233960 248234139 -5022444 + MIR SINE MIR 16 206 -56 1260 227 27 57 chr2 248236995 248237365 -5019218 - MLT1A2 LTR MaLR 0 374 16 1127 224 112 40 chr2 248237690 248238119 -5018464 - MLT1C LTR MaLR -2 465 6 732 317 90 22 chr2 248238461 248238960 -5017623 - HAL1 LINE L1 -1590 917 385 390 123 71 18 chr2 248239857 248240027 -5016556 + (TG)n Simple_repeat Simple_repeat 2 180 0 384 164 53 18 chr2 248240057 248240228 -5016355 + (TG)n Simple_repeat Simple_repeat 1 177 0 462 96 60 30 chr2 248240275 248240442 -5016141 + (TG)n Simple_repeat Simple_repeat 1 172 0 583 113 61 31 chr2 248240492 248240823 -5015760 + (TG)n Simple_repeat Simple_repeat 1 341 0 919 259 71 48 chr2 248242036 248242421 -5014162 + MLT1C LTR MaLR 6 404 -63 2451 63 0 19 chr2 248242421 248242736 -5013847 - AluY SINE Alu -2 309 1 919 259 71 48 chr2 248242736 248242786 -5013797 + MLT1C LTR MaLR 404 451 -16 181 240 168 64 chr2 248243377 248243502 -5013081 - MER5B DNA MER1_type -1 177 40 184 169 17 17 chr2 248244073 248244132 -5012451 + (TG)n Simple_repeat Simple_repeat 1 59 0 1515 191 14 14 chr2 248245403 248245680 -5010903 + AluJo SINE Alu 1 277 -35 892 78 78 0 chr2 248246450 248246579 -5010004 - MER85 DNA T2_type 0 139 1 580 177 204 0 chr2 248246584 248246731 -5009852 - L1MB7 LINE L1 -19 6165 5989 269 226 0 0 chr2 248246925 248246978 -5009605 + MIR SINE MIR 188 240 -22 329 261 56 31 chr2 248247495 248247656 -5008927 - AluSg/x SINE Alu 0 300 136 2080 81 0 22 chr2 248247852 248248125 -5008458 - AluSx SINE Alu -45 267 1 188 299 143 0 chr2 248248763 248248840 -5007743 - L3 LINE CR1 -431 1146 1059 207 349 12 12 chr2 248248881 248248967 -5007616 + MIR SINE MIR 29 114 -148 302 353 15 7 chr2 248249411 248249547 -5007036 + L1MC4 LINE L1 7690 7826 -216 233 317 158 0 chr2 248249974 248250075 -5006508 + MIR3 SINE MIR 14 130 -78 224 299 86 17 chr2 248250176 248250293 -5006290 - MER5B DNA MER1_type -51 127 3 424 231 34 43 chr2 248251343 248251460 -5005123 + MLT1C LTR MaLR 1 116 -389 257 143 0 0 chr2 248251472 248251514 -5005069 + MSTD LTR MaLR 1 42 -354 988 142 19 0 chr2 248251514 248251676 -5004907 + MSTD LTR MaLR 232 396 0 794 240 222 24 chr2 248251676 248251957 -5004626 + MLT1C LTR MaLR 168 467 0 237 83 0 0 chr2 248251970 248252006 -5004577 + (CA)n Simple_repeat Simple_repeat 1 36 0 2247 108 24 0 chr2 248252616 248252912 -5003671 - AluSq SINE Alu -10 303 1 201 380 96 0 chr2 248255001 248255167 -5001416 + MER5A DNA MER1_type 7 188 -1 987 172 103 10 chr2 248255172 248255375 -5001208 - MER58A DNA MER1_type -1 223 2 247 376 68 0 chr2 248255375 248255492 -5001091 + L2 LINE L2 3148 3272 0 547 258 44 15 chr2 248255887 248256089 -5000494 - L1MD3 LINE L1 -304 7691 7393 271 367 94 37 chr2 248256113 248256410 -5000173 - L2 LINE L2 -10 3262 2949 1030 236 4 9 chr2 248258718 248258943 -4997640 - MER58A DNA MER1_type 0 224 1 2271 112 20 0 chr2 248258996 248259299 -4997284 - AluSx SINE Alu -3 309 1 678 151 134 35 chr2 248259379 248259551 -4997032 - MER53 DNA DNA 0 189 1 4433 241 103 18 chr2 248260464 248260824 -4995759 - L1ME1 LINE L1 -197 6387 6059 1985 108 57 46 chr2 248260824 248261195 -4995388 - THE1C LTR MaLR 0 375 1 4433 241 103 18 chr2 248261195 248263300 -4993283 - L1ME1 LINE L1 -525 6059 3716 1859 139 4 4 chr2 248263302 248263576 -4993007 - AluSx SINE Alu -12 300 27 207 356 0 10 chr2 248263595 248263699 -4992884 + CT-rich Low_complexity Low_complexity 1 103 0 609 221 106 62 chr2 248264467 248264693 -4991890 + MIR SINE MIR 27 262 0 2032 114 60 0 chr2 248264845 248265126 -4991457 - AluSq SINE Alu -15 298 1 301 341 54 23 chr2 248266158 248266287 -4990296 + HAL1b LINE L1 61 193 -1155 373 275 34 65 chr2 248266552 248266814 -4989769 + L1M4 LINE L1 2687 2940 -3206 344 349 147 5 chr2 248266819 248267037 -4989546 + L1ME4a LINE L1 5676 5924 -197 753 216 32 22 chr2 248268595 248268780 -4987803 + MER53 DNA DNA 3 189 0 291 143 0 0 chr2 248268821 248268870 -4987713 + MADE1 DNA Mariner 2 50 -30 785 148 111 9 chr2 248269002 248269219 -4987364 - AluSx SINE Alu -51 261 23 416 176 14 154 chr2 248269329 248269550 -4987033 - L1ME1 LINE L1 -2988 3576 3387 832 121 17 0 chr2 248269566 248269682 -4986901 - AluJb SINE Alu -194 118 1 2077 248 65 24 chr2 248269682 248270483 -4986100 - L1ME1 LINE L1 -3172 3392 2559 4555 213 25 6 chr2 248270492 248271501 -4985082 - Tigger6a DNA MER2_type -1 1082 55 605 259 22 56 chr2 248271501 248271733 -4984850 - L1ME1 LINE L1 -5252 793 570 808 298 72 62 chr2 248271835 248272402 -4984181 - L1ME1 LINE L1 -5471 574 2 184 288 0 125 chr2 248273639 248273719 -4982864 + L3 LINE CR1 861 930 -647 229 309 62 0 chr2 248274097 248274194 -4982389 - MIR3 SINE MIR -6 202 100 205 343 0 38 chr2 248274263 248274350 -4982233 - MIR SINE MIR -65 143 68 207 243 52 103 chr2 248274363 248274499 -4982084 - L2 LINE L2 0 3272 3144 1148 208 9 0 chr2 248276432 248276653 -4979930 + MER58A DNA MER1_type 2 224 0 217 248 190 29 chr2 248276998 248277135 -4979448 + MIR SINE MIR 89 247 -15 478 244 12 0 chr2 248277170 248277342 -4979241 + (TGGG)n Simple_repeat Simple_repeat 3 176 0 189 195 0 0 chr2 248279652 248279693 -4976890 + (TTA)n Simple_repeat Simple_repeat 2 42 0 422 345 24 18 chr2 248280137 248280305 -4976278 - MIR SINE MIR -31 231 63 1964 151 3 7 chr2 248280310 248280628 -4975955 - AluSx SINE Alu 0 317 1 642 274 132 15 chr2 248280814 248281018 -4975565 - MIR SINE MIR -10 252 25 205 192 58 19 chr2 248283653 248283705 -4972878 + CT-rich Low_complexity Low_complexity 2 55 0 2705 88 0 79 chr2 248284082 248284489 -4972094 - MER51B LTR ERV1 -2 375 1 253 306 54 27 chr2 248285001 248285112 -4971471 - MIR SINE MIR -117 145 32 355 244 160 58 chr2 248285329 248285554 -4971029 + MIR SINE MIR 14 261 -1 229 302 146 0 chr2 248286597 248286693 -4969890 + L2 LINE L2 2388 2497 -817 230 362 76 36 chr2 248286724 248287053 -4969530 + L2 LINE L2 2636 2977 -337 336 189 0 0 chr2 248287493 248287567 -4969016 + (TG)n Simple_repeat Simple_repeat 1 74 0 398 130 0 26 chr2 248289752 248289784 -4966799 + (TCCC)n Simple_repeat Simple_repeat 4 35 -43 1584 195 0 30 chr2 248289784 248290081 -4966502 - AluJb SINE Alu -7 305 18 398 130 0 26 chr2 248290081 248290125 -4966458 + (TCCC)n Simple_repeat Simple_repeat 35 78 0 284 236 109 9 chr2 248290202 248290312 -4966271 - L1ME4a LINE L1 0 6121 6001 238 331 110 13 chr2 248290705 248290859 -4965724 + L3 LINE CR1 1059 1227 -350 1356 239 61 47 chr2 248291293 248291391 -4965192 + MLT1D LTR MaLR 27 122 -383 2106 94 4 4 chr2 248291391 248291666 -4964917 - AluSc SINE Alu -6 303 29 1356 239 61 47 chr2 248291666 248292039 -4964544 + MLT1D LTR MaLR 122 505 0 207 0 0 0 chr2 248292510 248292533 -4964050 + (A)n Simple_repeat Simple_repeat 1 23 0 2123 100 10 26 chr2 248292824 248293134 -4963449 + AluSq SINE Alu 1 305 -8 191 111 0 28 chr2 248296043 248296079 -4960504 + (CA)n Simple_repeat Simple_repeat 2 36 0 316 192 0 82 chr2 248296372 248296445 -4960138 - MER96 DNA MER1_type? -1 174 108 355 279 16 25 chr2 248297784 248297906 -4958677 + MIR SINE MIR 72 192 -70 813 212 0 0 chr2 248298418 248298597 -4957986 + (CA)n Simple_repeat Simple_repeat 2 180 0 295 226 11 11 chr2 248298587 248298680 -4957903 + (CATA)n Simple_repeat Simple_repeat 1 93 0 * 270 125 0 0 chr2 248298681 248298729 -4957854 - MER4-int LTR ERV1 -5439 1159 1112 372 189 0 0 chr2 248298729 248298803 -4957780 + (CA)n Simple_repeat Simple_repeat 1 74 0 285 135 0 0 chr2 248298806 248298858 -4957725 - MER4-int LTR ERV1 -5436 1162 1111 240 111 0 0 chr2 248298860 248298896 -4957687 + (CATA)n Simple_repeat Simple_repeat 4 39 0 2083 128 7 0 chr2 248299045 248299370 -4957213 - AluSx SINE Alu 0 312 1 337 326 64 41 chr2 248299390 248299562 -4957021 - L1ME LINE L1 -332 5789 5614 808 233 62 0 chr2 248299586 248299779 -4956804 - MER58A DNA MER1_type -15 209 5 230 371 31 10 chr2 248299828 248299925 -4956658 + L2 LINE L2 2971 3069 -203 337 310 44 0 chr2 248300160 248300273 -4956310 - MIR SINE MIR -75 187 70 471 155 0 0 chr2 248300623 248300707 -4955876 + (CA)n Simple_repeat Simple_repeat 1 84 0 748 256 67 0 chr2 248300899 248301094 -4955489 + MER58A DNA MER1_type 5 212 -12 2463 145 36 5 chr2 248301198 248301612 -4954971 + MSTA LTR MaLR 2 428 0 2054 114 0 31 chr2 248301676 248301993 -4954590 - AluSx SINE Alu -5 307 1 22 0 0 0 chr2 248301995 248302017 -4954566 + AT_rich Low_complexity Low_complexity 1 22 0 2097 134 3 13 chr2 248302369 248302676 -4953907 - AluSx SINE Alu -8 304 1 1439 219 131 24 chr2 248303082 248303515 -4953068 + MLT2B1 LTR ERVL 1 487 -33 320 0 25 0 chr2 248303515 248303555 -4953028 + (CA)n Simple_repeat Simple_repeat 2 42 0 1439 219 131 24 chr2 248303555 248303578 -4953005 + MLT2B1 LTR ERVL 487 506 -14 1755 208 45 50 chr2 248303630 248304115 -4952468 - MLT2B2 LTR ERVL -30 485 3 2391 101 0 0 chr2 248304210 248304507 -4952076 - AluSx SINE Alu -15 297 1 280 248 66 33 chr2 248304589 248304710 -4951873 + MER113 DNA MER1_type? 217 341 -180 265 306 75 61 chr2 248304897 248305044 -4951539 - MER5A DNA MER1_type -1 188 40 668 181 85 45 chr2 248305748 248305925 -4950658 + MLT1C LTR MaLR 284 467 0 222 37 0 0 chr2 248306065 248306092 -4950491 + (CA)n Simple_repeat Simple_repeat 2 28 0 855 269 45 7 chr2 248306327 248306635 -4949948 - MER33 DNA MER1_type 0 324 5 513 306 133 35 chr2 248309725 248310206 -4946377 - L2 LINE L2 -501 2813 2286 518 135 0 10 chr2 248310214 248310310 -4946273 + (TTCC)n Simple_repeat Simple_repeat 2 96 0 1194 110 103 20 chr2 248310332 248310706 -4945877 - MER4B-int LTR ERV1 -645 1149 736 986 67 6 144 chr2 248310706 248310886 -4945697 - L1PA7 LINE L1 -2 6152 5998 240 284 14 0 chr2 248313030 248313104 -4943479 - MER63 DNA MER1_type -3 1057 983 * 465 207 0 0 chr2 248313102 248313184 -4943399 - MER63 DNA MER1_type -302 760 679 1172 188 28 0 chr2 248314504 248314717 -4941866 + MER20 DNA MER1_type 1 219 0 252 340 21 0 chr2 248314961 248315058 -4941525 + L3 LINE CR1 1282 1380 -197 249 244 35 87 chr2 248315097 248315212 -4941371 - L3 LINE CR1 -628 949 841 315 0 0 0 chr2 248316276 248316311 -4940272 + (TTA)n Simple_repeat Simple_repeat 2 36 0 2003 110 4 0 chr2 248316361 248316625 -4939958 + AluSq SINE Alu 1 265 -48 459 13 13 64 chr2 248316625 248316703 -4939880 + (CAAAA)n Simple_repeat Simple_repeat 2 75 0 217 330 56 0 chr2 248317002 248317121 -4939462 - MIR SINE MIR -50 158 29 2279 102 0 29 chr2 248317258 248317572 -4939011 + AluSg SINE Alu 5 309 -1 227 347 71 0 chr2 248317813 248317911 -4938672 - MIR SINE MIR -79 183 79 289 376 56 16 chr2 248317991 248318116 -4938467 + L2 LINE L2 3143 3272 0 2023 201 31 43 chr2 248318278 248318786 -4937797 + MLT1D LTR MaLR 1 502 -3 1849 146 0 4 chr2 248318872 248319140 -4937443 - AluJb SINE Alu -23 289 23 220 270 32 0 chr2 248319505 248319568 -4937015 - L2 LINE L2 -2 3270 3206 314 274 101 86 chr2 248319607 248319943 -4936640 - MER102b DNA MER1_type 0 341 1 376 272 166 16 chr2 248320800 248321113 -4935470 + MLT1I LTR MaLR 43 402 -7 2282 93 3 0 chr2 248321231 248321522 -4935061 - AluSc SINE Alu -17 292 1 1126 201 68 70 chr2 248323360 248323743 -4932840 + MLT1B LTR MaLR 1 382 -8 214 329 0 0 chr2 248324991 248325064 -4931519 + (TG)n Simple_repeat Simple_repeat 1 73 0 192 216 0 0 chr2 248325160 248325211 -4931372 + (TG)n Simple_repeat Simple_repeat 1 51 0 570 225 0 0 chr2 248325235 248325413 -4931170 + (TG)n Simple_repeat Simple_repeat 1 178 0 207 188 0 0 chr2 248325428 248325476 -4931107 + (TG)n Simple_repeat Simple_repeat 1 48 0 220 270 112 11 chr2 248326042 248326131 -4930452 - MIR SINE MIR 0 262 165 1805 158 65 19 chr2 248326150 248326472 -4930111 - MER1B DNA MER1_type 0 337 1 457 244 63 31 chr2 248327573 248327700 -4928883 - MIR SINE MIR -61 147 17 275 330 43 16 chr2 248329851 248330036 -4926547 + LTR16C LTR ERVL 287 476 -15 756 286 9 44 chr2 248330102 248330329 -4926254 - MIR SINE MIR 0 262 44 264 236 56 14 chr2 248331249 248331321 -4925262 + MER5B DNA MER1_type 91 165 -13 236 237 7 125 chr2 248332363 248332515 -4924068 + L2 LINE L2 2911 3044 -228 190 360 67 0 chr2 248332593 248332682 -4923901 + L2 LINE L2 3178 3272 0 273 221 0 0 chr2 248332957 248333025 -4923558 + GA-rich Low_complexity Low_complexity 1 68 0 217 219 0 0 chr2 248333026 248333067 -4923516 + (TGGA)n Simple_repeat Simple_repeat 2 42 0 2030 186 65 95 chr2 248334317 248334784 -4921799 - L1MC4a LINE L1 -1 7807 7328 2258 122 3 0 chr2 248334784 248335095 -4921488 + AluSx SINE Alu 1 312 0 2030 186 65 95 chr2 248335095 248335269 -4921314 - L1MC4a LINE L1 -480 7328 7150 2180 93 0 38 chr2 248335269 248335598 -4920985 - AluY SINE Alu 0 318 1 2030 186 65 95 chr2 248335598 248336001 -4920582 - L1MC4a LINE L1 -658 7150 6821 2592 71 0 0 chr2 248336144 248336455 -4920128 - AluY SINE Alu 0 311 1 1719 173 0 50 chr2 248336476 248336794 -4919789 - AluJb SINE Alu -9 303 2 21 36 0 0 chr2 248336794 248336822 -4919761 + AT_rich Low_complexity Low_complexity 1 28 0 215 305 0 0 chr2 248336909 248336968 -4919615 + L2 LINE L2 3197 3255 -17 420 266 16 31 chr2 248337078 248337206 -4919377 - MER5A DNA MER1_type -53 136 11 * 510 291 128 20 chr2 248337188 248337391 -4919192 + MIR SINE MIR 17 241 -21 222 295 22 86 chr2 248338127 248338266 -4918317 - MIR SINE MIR -119 143 14 231 299 234 33 chr2 248338842 248339086 -4917497 - L2 LINE L2 -55 3258 2966 469 281 96 27 chr2 248339263 248339472 -4917111 + MIR SINE MIR 30 251 -11 2128 131 6 10 chr2 248340302 248340615 -4915968 - AluSx SINE Alu 0 312 1 1726 176 3 0 chr2 248340713 248341003 -4915580 + AluJo SINE Alu 1 291 -21 411 211 184 0 chr2 248341015 248341129 -4915454 + FLAM_A SINE Alu 1 135 -7 200 161 0 0 chr2 248341178 248341209 -4915374 - L2 LINE L2 -16 3297 3267 224 340 146 35 chr2 248342951 248343095 -4913488 + MIR SINE MIR 38 197 -65 457 359 136 26 chr2 248343743 248344281 -4912302 - L3 LINE CR1 -245 1332 736 1708 194 36 64 chr2 248344286 248344458 -4912125 + MLT1C LTR MaLR 11 186 -281 2365 89 0 7 chr2 248344458 248344762 -4911821 + AluSg1 SINE Alu 1 302 -7 1708 194 36 64 chr2 248344762 248345059 -4911524 + MLT1C LTR MaLR 186 467 0 190 333 0 0 chr2 248345059 248345113 -4911470 - L3 LINE CR1 -837 740 687 381 254 8 39 chr2 248345779 248345909 -4910674 - MER103 DNA DNA -7 159 34 3307 177 34 13 chr2 248346955 248347627 -4908956 + L1MB8 LINE L1 5484 6169 -9 225 65 0 0 chr2 248348754 248348785 -4907798 + (TTTG)n Simple_repeat Simple_repeat 4 34 0 900 199 8 13 chr2 248349018 248349552 -4907031 + (TGGA)n Simple_repeat Simple_repeat 1 531 0 478 317 88 10 chr2 248349635 248349840 -4906743 + MIR SINE MIR 24 244 -18 836 208 251 44 chr2 248350115 248350346 -4906237 - L2 LINE L2 -1 3312 3130 273 29 0 0 chr2 248350346 248350380 -4906203 + (TG)n Simple_repeat Simple_repeat 2 35 0 836 208 251 44 chr2 248350380 248350656 -4905927 - L2 LINE L2 -183 3130 2704 368 345 161 3 chr2 248351392 248351696 -4904887 - L1M4 LINE L1 -3584 2562 2211 2182 86 24 14 chr2 248352028 248352319 -4904264 - AluY SINE Alu -17 294 1 511 75 15 0 chr2 248403195 248403262 -4853321 + MER51A LTR ERV1 567 634 0 536 303 35 0 chr2 248403375 248403520 -4853063 - MER91A DNA MER1_type -46 150 1 1383 211 85 3 chr2 248403845 248404163 -4852420 + MER2 DNA MER2_type 1 344 0 1069 208 10 0 chr2 248404170 248404367 -4852216 + MER82 DNA MER2_type 6 204 -449 22 35 0 0 chr2 248404369 248404398 -4852185 + AT_rich Low_complexity Low_complexity 1 29 0 903 281 107 35 chr2 248404626 248405057 -4851526 + MER82 DNA MER2_type 171 632 -21 202 320 13 26 chr2 248406576 248406654 -4849929 + MIR SINE MIR 73 149 -113 2602 14 0 0 chr2 248408533 248408829 -4847754 + AluY SINE Alu 1 296 -15 908 59 8 0 chr2 248409064 248409183 -4847400 - THE1A-int LTR MaLR -1460 120 1 1546 119 55 11 chr2 248409183 248409480 -4847103 - THE1A LTR MaLR 0 355 1 629 180 0 16 chr2 248409480 248409595 -4846988 + MLT2B2 LTR ERVL 403 515 0 373 341 32 0 chr2 248410032 248410158 -4846425 - MIR SINE MIR -8 254 125 500 307 104 22 chr2 248410169 248410400 -4846183 - MIR SINE MIR -10 252 3 1011 109 17 6 chr2 248411988 248412162 -4844421 + (TTTC)n Simple_repeat Simple_repeat 4 179 0 432 158 0 0 chr2 248412163 248412239 -4844344 + CT-rich Low_complexity Low_complexity 3 78 0 297 151 0 0 chr2 248412400 248412453 -4844130 + (TG)n Simple_repeat Simple_repeat 2 54 0 370 277 51 22 chr2 248415929 248416066 -4840517 - MIR SINE MIR -26 236 96 520 290 61 22 chr2 248416109 248416340 -4840243 - MER102b DNA MER1_type -51 290 51 526 235 74 27 chr2 248416392 248416541 -4840042 + L1MA9 LINE L1 6117 6272 -40 256 280 36 66 chr2 248419009 248419130 -4837453 + MIR SINE MIR 36 151 -65 382 128 0 115 chr2 248419130 248419208 -4837375 + Tigger2 DNA MER2_type 1 69 -2649 * 2398 151 64 2 chr2 248419192 248419615 -4836968 + Tigger2 DNA MER2_type 2267 2715 -3 187 333 56 14 chr2 248419621 248419693 -4836890 + MIR SINE MIR 156 230 -32 244 265 57 56 chr2 248421010 248421197 -4835386 + L1MDa LINE L1 1056 1271 -5111 2293 88 0 0 chr2 248421201 248421495 -4835088 - AluSg SINE Alu -14 296 3 1606 206 14 57 chr2 248421507 248421944 -4834639 - L1ME2 LINE L1 0 6164 5747 432 258 25 0 chr2 248422515 248422635 -4833948 - MER103 DNA DNA -1 165 43 207 0 0 0 chr2 248422668 248422691 -4833892 + (CA)n Simple_repeat Simple_repeat 1 23 0 905 265 27 18 chr2 248422724 248423060 -4833523 - L1ME4a LINE L1 -208 5913 5575 260 184 0 0 chr2 248423092 248423141 -4833442 - L1MC4 LINE L1 -2 8040 7992 2890 244 158 19 chr2 248423148 248423758 -4832825 - L1MC4 LINE L1 -142 7900 7376 1566 172 3 14 chr2 248423758 248424055 -4832528 - AluJo SINE Alu -16 296 3 2890 244 158 19 chr2 248424055 248424587 -4831996 - L1MC4 LINE L1 -666 7376 6499 1035 124 0 0 chr2 248424841 248424991 -4831592 + (GGAA)n Simple_repeat Simple_repeat 1 327 0 1035 124 0 0 chr2 248424991 248425168 -4831415 + (GGAA)n Simple_repeat Simple_repeat 2 178 0 534 316 60 0 chr2 248425673 248425942 -4830641 - L1MEc LINE L1 -5354 1042 758 839 154 0 7 chr2 248425959 248426108 -4830475 + AluSg/x SINE Alu 156 303 -9 1650 174 10 10 chr2 248426119 248426417 -4830166 + AluSx SINE Alu 1 298 -14 216 0 0 0 chr2 248426417 248426441 -4830142 + (TA)n Simple_repeat Simple_repeat 2 25 0 727 316 67 50 chr2 248426529 248427115 -4829468 - L1MEc LINE L1 -5758 638 43 396 214 60 8 chr2 248427440 248427557 -4829026 - MER103 DNA DNA -5 161 39 194 191 48 0 chr2 248428887 248428929 -4827654 + L2 LINE L2 3266 3309 -4 462 39 77 51 chr2 248429807 248429885 -4826698 + MADE1 DNA Mariner 1 80 0 447 282 48 0 chr2 248430213 248430337 -4826246 - L1ME4a LINE L1 -14 6107 5978 494 320 10 5 chr2 248430344 248430547 -4826036 - L1ME4a LINE L1 -257 5864 5661 314 321 37 0 chr2 248431039 248431148 -4825435 - L2 LINE L2 -35 3278 3166 247 200 146 27 chr2 248431381 248431491 -4825092 - L2 LINE L2 -460 2854 2732 21 36 0 0 chr2 248432888 248432916 -4823667 + AT_rich Low_complexity Low_complexity 1 28 0 281 310 17 60 chr2 248434846 248434962 -4821621 + MIR3 SINE MIR 67 177 -31 184 315 0 19 chr2 248436301 248436355 -4820228 - L3 LINE CR1 -2 1575 1523 388 310 113 49 chr2 248436899 248437225 -4819358 - L2 LINE L2 -2 3270 2924 231 366 19 33 chr2 248437500 248437984 -4818599 - TAR1 Satellite telomeric -572 1539 1063 1043 218 9 23 chr2 248438366 248438582 -4818001 - MLT1A1 LTR MaLR -1 364 152 34 24 0 0 chr2 248438765 248438806 -4817777 + AT_rich Low_complexity Low_complexity 1 41 0 288 375 18 4 chr2 248438808 248439037 -4817546 + L1M4 LINE L1 3802 4033 -2113 1966 227 15 7 chr2 248439186 248439640 -4816943 - L1ME1 LINE L1 -142 6024 5567 253 261 143 75 chr2 248439736 248439897 -4816686 - MER5B DNA MER1_type -5 173 2 849 127 57 19 chr2 248444356 248444513 -4812070 - L1MB3 LINE L1 -2 6181 6019 1787 191 49 20 chr2 248444717 248445312 -4811271 - L1MB3 LINE L1 -392 5782 5151 3204 196 49 21 chr2 248448487 248449202 -4807381 + L1MA9 LINE L1 5575 6309 -3 2034 125 10 7 chr2 248449220 248449524 -4807059 - AluSx SINE Alu -3 309 5 649 242 124 11 chr2 248450613 248450886 -4805697 - MLT1C LTR MaLR 0 467 164 1662 79 0 13 chr2 248451365 248451593 -4804990 - AluSp SINE Alu -3 310 86 330 264 88 14 chr2 248452629 248452777 -4803806 - L1ME4a LINE L1 -4 6117 5959 438 271 116 30 chr2 248452929 248453128 -4803455 + MIR SINE MIR 34 249 -13 421 229 78 36 chr2 248453175 248453367 -4803216 - L1ME4a LINE L1 -213 5908 5709 189 0 0 0 chr2 248453512 248453533 -4803050 + (T)n Simple_repeat Simple_repeat 1 21 0 210 37 0 0 chr2 248454838 248454865 -4801718 + (T)n Simple_repeat Simple_repeat 1 27 0 21 0 0 0 chr2 248456128 248456149 -4800434 + AT_rich Low_complexity Low_complexity 1 21 0 3896 160 35 36 chr2 248456150 248456547 -4800036 - L1MB3 LINE L1 -4 6179 5783 186 43 0 0 chr2 248456547 248456570 -4800013 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2172 61 11 0 chr2 248456570 248456850 -4799733 - AluY SINE Alu -28 283 1 3896 160 35 36 chr2 248456850 248457234 -4799349 - L1MB3 LINE L1 -398 5785 5398 2191 161 34 46 chr2 248457234 248457806 -4798777 - MLT2A2 LTR ERVL 0 554 1 1279 171 76 8 chr2 248457806 248458070 -4798513 - L1MB3 LINE L1 -744 5402 5121 1367 89 51 76 chr2 248458568 248458628 -4797955 + MER30 DNA MER1_type 1 61 -169 1919 141 0 13 chr2 248458628 248458932 -4797651 + AluSx SINE Alu 1 300 -12 1367 89 51 76 chr2 248458932 248459107 -4797476 + MER30 DNA MER1_type 61 230 0 346 293 239 28 chr2 248461563 248461956 -4794627 + L2 LINE L2 2828 3303 -10 376 174 0 14 chr2 248461957 248462026 -4794557 - MLT1D LTR MaLR 0 626 559 2195 75 0 0 chr2 248462026 248462348 -4794235 + AluY SINE Alu 1 322 0 1433 178 97 52 chr2 248462387 248462736 -4793847 - MLT1D LTR MaLR -140 365 1 2402 197 81 17 chr2 248462757 248463290 -4793293 + MLT1F1 LTR MaLR 1 567 0 1065 217 68 80 chr2 248463890 248464304 -4792279 - MLT1I LTR MaLR 0 409 1 262 192 14 41 chr2 248464362 248464435 -4792148 - LTR67 LTR ERVL -3 554 484 * 1046 275 105 52 chr2 248464374 248464915 -4791668 - MLT1K LTR MaLR -15 573 4 2162 127 9 6 chr2 248465202 248465533 -4791050 + THE1A LTR MaLR 1 332 -23 549 333 118 30 chr2 248465832 248466238 -4790345 + L3 LINE CR1 220 661 -916 359 261 64 51 chr2 248466326 248466483 -4790100 - MIR SINE MIR -8 254 96 252 0 0 0 chr2 248466737 248466765 -4789818 + (TG)n Simple_repeat Simple_repeat 1 28 0 184 322 67 54 chr2 248467561 248467630 -4788953 - MIR SINE MIR -33 229 162 1870 160 95 47 chr2 248467630 248468073 -4788510 + MLT1C LTR MaLR 2 465 -2 184 322 67 54 chr2 248468073 248468152 -4788431 - MIR SINE MIR -100 162 79 2227 96 0 7 chr2 248469816 248470119 -4786464 + AluSq SINE Alu 1 301 -12 2015 169 29 3 chr2 248470425 248470775 -4785808 - MLT1A1 LTR MaLR -1 364 6 187 335 89 51 chr2 248473982 248474218 -4782365 - L3 LINE CR1 -1074 503 259 978 91 23 11 chr2 248474392 248474568 -4782015 + (TTTC)n Simple_repeat Simple_repeat 2 179 0 217 158 53 0 chr2 248474570 248474627 -4781956 + CT-rich Low_complexity Low_complexity 3 62 0 182 305 188 8 chr2 248474975 248475103 -4781480 - MIR3 SINE MIR -3 205 55 614 271 111 34 chr2 248476281 248476631 -4779952 - LTR16A LTR ERVL -7 443 67 217 240 0 20 chr2 248478270 248478320 -4778263 + (TG)n Simple_repeat Simple_repeat 2 50 0 1483 186 63 88 chr2 248478395 248478507 -4778076 - MLT1C LTR MaLR 0 467 354 1988 94 4 0 chr2 248478507 248478773 -4777810 + AluSq SINE Alu 1 267 -46 1483 186 63 88 chr2 248478773 248479139 -4777444 - MLT1C LTR MaLR -113 354 1 865 145 97 0 chr2 248479937 248480082 -4776501 - MLT1B LTR MaLR 0 390 232 2058 123 0 3 chr2 248480125 248480434 -4776149 - AluSx SINE Alu -4 308 1 628 170 0 9 chr2 248480437 248480543 -4776040 - MLT1B LTR MaLR -285 105 1 558 235 93 83 chr2 248480614 248480916 -4775667 - MLT1I LTR MaLR -8 401 97 190 395 70 12 chr2 248481166 248481252 -4775331 - L2 LINE L2 -44 3228 3138 325 138 0 0 chr2 248481963 248482021 -4774562 - Alu SINE Alu 0 301 244 381 311 29 19 chr2 248482050 248482259 -4774324 - L1ME LINE L1 -363 5758 5548 310 326 11 0 chr2 248482281 248482370 -4774213 - L1ME LINE L1 -727 5451 5362 336 24 0 0 chr2 248482437 248482478 -4774105 + (GA)n Simple_repeat Simple_repeat 2 42 0 2072 94 4 0 chr2 248482479 248482755 -4773828 - AluSx SINE Alu -35 277 1 21 36 0 0 chr2 248482857 248482885 -4773698 + AT_rich Low_complexity Low_complexity 1 28 0 2015 108 25 0 chr2 248483766 248484052 -4772531 + AluSc SINE Alu 1 293 -16 2335 167 44 33 chr2 248486018 248486473 -4770110 + LOR1b LTR ERV1 2 461 0 2141 112 3 0 chr2 248486648 248486951 -4769632 + AluSx SINE Alu 6 309 -3 23 0 0 0 chr2 248487091 248487114 -4769469 + AT_rich Low_complexity Low_complexity 1 23 0 1115 156 53 74 chr2 248487287 248487530 -4769053 + MER51A LTR ERV1 1 238 -396 389 299 27 27 chr2 248489412 248489559 -4767024 + L2 LINE L2 3167 3313 0 251 224 30 30 chr2 248491165 248491232 -4765351 + CT-rich Low_complexity Low_complexity 1 67 0 2011 108 7 0 chr2 248491350 248491636 -4764947 + AluSg SINE Alu 1 288 -22 1832 71 0 17 chr2 248493818 248494058 -4762525 + AluY SINE Alu 1 236 -75 266 284 55 9 chr2 248494951 248495060 -4761523 - MIR SINE MIR -56 152 39 257 366 104 13 chr2 248495093 248495486 -4761097 - L2 LINE L2 -1141 2173 1745 2161 210 57 28 chr2 248495627 248496132 -4760451 + MLT1F LTR MaLR 8 527 -15 256 281 12 108 chr2 248496135 248496302 -4760281 - L2 LINE L2 -1841 1473 1323 2214 113 0 0 chr2 248496643 248496952 -4759631 - AluSg SINE Alu -1 309 1 181 356 22 22 chr2 248499102 248499192 -4757391 + L2 LINE L2 1934 2023 -1291 2098 254 84 31 chr2 248500333 248501010 -4755573 - MER21B LTR ERV1 -51 812 100 649 187 16 8 chr2 248501066 248501189 -4755394 - FLAM_A SINE Alu -9 124 1 356 228 11 43 chr2 248501216 248501308 -4755275 - MER21B LTR ERV1 -774 89 1 298 191 71 0 chr2 248501351 248501435 -4755148 + MER112 DNA MER1_type 71 160 -100 440 239 0 69 chr2 248502005 248502135 -4754448 + MER21B LTR ERV1 1 121 -742 643 257 61 77 chr2 248502145 248502406 -4754177 + MER21B LTR ERV1 96 352 -511 1058 235 52 79 chr2 248502490 248502856 -4753727 + MER21B LTR ERV1 356 711 -152 386 238 50 0 chr2 248502931 248503032 -4753551 + MER21B LTR ERV1 650 755 -108 250 285 160 21 chr2 248503034 248503178 -4753405 + MER5A DNA MER1_type 26 189 0 344 345 97 36 chr2 248503302 248503358 -4753225 - L1ME4a LINE L1 -207 5914 5863 2231 84 0 7 chr2 248503358 248503655 -4752928 - AluSg1 SINE Alu -14 295 1 344 345 97 36 chr2 248503655 248503876 -4752707 - L1ME4a LINE L1 -258 5863 5620 400 293 96 30 chr2 248503912 248504110 -4752473 - L1ME4a LINE L1 -2265 5543 5333 186 304 76 11 chr2 248505992 248506084 -4750499 - L2 LINE L2 -1 3271 3174 397 253 71 0 chr2 248506688 248506787 -4749796 + MIR3 SINE MIR 84 189 -19 205 239 0 30 chr2 248506818 248506885 -4749698 + (TTA)n Simple_repeat Simple_repeat 3 67 0 309 321 36 9 chr2 248507194 248507306 -4749277 + MIR3 SINE MIR 83 197 -11 185 220 0 119 chr2 248508339 248508398 -4748185 - L2 LINE L2 0 3272 3221 215 343 27 0 chr2 248508458 248508531 -4748052 + L2 LINE L2 3238 3312 -1 10198 127 9 34 chr2 248508836 248510441 -4746142 - THE1C-int LTR MaLR -11 1569 4 1609 187 52 35 chr2 248510444 248510813 -4745770 - THE1C LTR MaLR 0 375 1 406 234 47 9 chr2 248511286 248511393 -4745190 - MLT1J1 LTR MaLR -335 111 1 345 211 56 11 chr2 248511610 248511700 -4744883 + MIR SINE MIR 73 166 -96 2069 111 72 28 chr2 248511895 248512254 -4744329 + THE1C LTR MaLR 1 375 0 211 436 32 13 chr2 248512264 248512420 -4744163 + L3 LINE CR1 222 380 -1197 2037 115 18 0 chr2 248512593 248512752 -4743831 - AluSx SINE Alu -21 291 123 459 0 0 0 chr2 248512752 248512803 -4743780 + (TG)n Simple_repeat Simple_repeat 2 52 0 2037 115 18 0 chr2 248512803 248512929 -4743654 - AluSx SINE Alu -189 123 1 399 293 44 49 chr2 248513121 248513307 -4743276 - L1ME LINE L1 -464 5657 5472 342 283 98 58 chr2 248513564 248513769 -4742814 - L1ME4a LINE L1 -29 6092 5880 261 297 167 25 chr2 248513770 248514208 -4742375 - L1ME4a LINE L1 -303 5818 5319 348 267 38 19 chr2 248514661 248514766 -4741817 + L3 LINE CR1 1233 1339 -238 219 225 34 90 chr2 248514889 248514978 -4741605 + L3 LINE CR1 1494 1577 0 459 166 14 3 chr2 248517009 248517151 -4739432 - MER53 DNA DNA -2 187 2 2249 137 55 94 chr2 248518966 248519479 -4737104 - MER52C LTR ERV1 0 1278 786 1998 155 13 57 chr2 248519472 248519932 -4736651 - MER52C LTR ERV1 -736 542 1 * 2125 130 44 14 chr2 248519932 248520284 -4736299 - MLT1B LTR MaLR -27 363 1 2106 104 3 0 chr2 248520412 248520699 -4735884 + AluSq SINE Alu 1 288 -25 191 319 42 0 chr2 248520724 248520796 -4735787 + MIR SINE MIR 169 243 -19 195 364 59 0 chr2 248521053 248521171 -4735412 + L2 LINE L2 2937 3061 -252 985 217 42 72 chr2 248521229 248521561 -4735022 - MER74B LTR ERVL -7 615 294 531 150 0 0 chr2 248521621 248521701 -4734882 - MLT1B LTR MaLR -192 198 119 * 1037 190 8 54 chr2 248521695 248521937 -4734646 - MER74B LTR ERVL -334 288 58 203 190 22 44 chr2 248522010 248522147 -4734436 + GA-rich Low_complexity Low_complexity 3 136 0 194 108 0 95 chr2 248522690 248522764 -4733819 + (AGGGGG)n Simple_repeat Simple_repeat 5 71 0 282 229 57 67 chr2 248522957 248523062 -4733521 + LTR33 LTR ERVL 416 519 -2 2206 104 3 0 chr2 248523889 248524197 -4732386 + AluSx SINE Alu 1 309 -3 314 277 98 55 chr2 248525038 248525312 -4731271 + LTR16C LTR ERVL 190 475 -16 305 337 136 12 chr2 248525568 248525737 -4730846 - L2 LINE L2 0 3272 3083 188 204 19 56 chr2 248525762 248525816 -4730767 + L2 LINE L2 3006 3057 -215 2294 132 13 21 chr2 248525914 248526292 -4730291 - THE1C LTR MaLR 0 375 1 281 294 123 32 chr2 248526891 248527078 -4729505 + L2 LINE L2 3020 3223 -49 647 273 51 6 chr2 248528777 248528953 -4727630 - MIR SINE MIR -56 206 23 1515 165 6 108 chr2 248529285 248529619 -4726964 - AluJo SINE Alu -2 300 1 2550 170 17 46 chr2 248530052 248530571 -4726012 - MLT1D LTR MaLR -1 504 1 216 86 0 0 chr2 248531467 248531502 -4725081 + (A)n Simple_repeat Simple_repeat 1 35 0 343 144 58 52 chr2 248531686 248531859 -4724724 + CT-rich Low_complexity Low_complexity 1 174 0 743 218 65 0 chr2 248532309 248532479 -4724104 - MER58A DNA MER1_type -37 187 7 217 291 55 18 chr2 248532933 248533043 -4723540 + L2 LINE L2 2641 2754 -560 2199 228 59 9 chr2 248533251 248533791 -4722792 - MLT1F1 LTR MaLR 0 567 1 233 263 75 25 chr2 248533827 248533907 -4722676 + MIR SINE MIR 87 170 -92 2061 115 7 0 chr2 248534214 248534509 -4722074 - AluSx SINE Alu -14 298 2 1443 102 49 36 chr2 248534991 248535216 -4721367 - MER30 DNA MER1_type 0 230 3 230 346 0 0 chr2 248536524 248536605 -4719978 + MER117 DNA MER1_type 106 186 -11 1716 192 104 0 chr2 248538682 248539036 -4717547 + MLT2B2 LTR ERVL 1 391 -124 2302 115 29 9 chr2 248539044 248539392 -4717191 - THE1A LTR MaLR 0 355 1 11035 98 3 0 chr2 248539392 248540816 -4715767 - THE1A-int LTR MaLR 0 1580 152 4356 235 67 48 chr2 248541296 248541707 -4714876 - L1MEc LINE L1 -1398 4817 4415 1427 149 36 32 chr2 248541707 248541988 -4714595 + AluJb SINE Alu 1 282 -30 4356 235 67 48 chr2 248541988 248543424 -4713159 - L1MEc LINE L1 -1800 4415 2934 1783 106 0 15 chr2 248543659 248543952 -4712631 - AluSq SINE Alu 0 313 33 690 13 0 0 chr2 248543974 248544053 -4712530 + (GAAA)n Simple_repeat Simple_repeat 2 80 0 1396 241 74 53 chr2 248544053 248544464 -4712119 - L1MEc LINE L1 -3269 2946 2512 512 40 0 192 chr2 248544464 248544523 -4712060 - MADE1 DNA Mariner 0 80 46 1614 81 178 0 chr2 248544523 248544781 -4711802 + AluSx SINE Alu 1 304 -8 512 40 0 192 chr2 248544781 248544820 -4711763 - MADE1 DNA Mariner -34 46 1 1396 241 74 53 chr2 248544820 248545109 -4711474 - L1MEc LINE L1 -3703 2512 2231 956 226 14 10 chr2 248545112 248545320 -4711263 + MER3 DNA MER1_type 1 209 0 2182 284 106 19 chr2 248545320 248546717 -4709866 - L1MEc LINE L1 -4121 2275 758 839 154 0 7 chr2 248546734 248546883 -4709700 + AluSg/x SINE Alu 156 303 -9 1848 164 0 0 chr2 248546894 248547187 -4709396 + AluSx SINE Alu 1 293 -19 414 0 0 0 chr2 248547187 248547233 -4709350 + (TA)n Simple_repeat Simple_repeat 2 47 0 728 320 82 45 chr2 248547239 248547907 -4708676 - L1MEc LINE L1 -5661 735 43 396 214 60 8 chr2 248548232 248548349 -4708234 - MER103 DNA DNA -5 161 39 194 191 48 0 chr2 248549684 248549726 -4706857 + L2 LINE L2 3266 3309 -4 462 39 77 51 chr2 248550603 248550681 -4705902 + MADE1 DNA Mariner 1 80 0 462 274 48 0 chr2 248551008 248551132 -4705451 - L1ME4a LINE L1 -14 6107 5978 722 300 7 34 chr2 248551139 248551436 -4705147 - L1ME4a LINE L1 -257 5864 5576 314 321 37 0 chr2 248552663 248552772 -4703811 - L2 LINE L2 -35 3278 3166 264 211 147 18 chr2 248553005 248553114 -4703469 - L2 LINE L2 -460 2854 2732 21 0 0 0 chr2 248554122 248554143 -4702440 + AT_rich Low_complexity Low_complexity 1 21 0 219 69 0 0 chr2 248554881 248554910 -4701673 + (TG)n Simple_repeat Simple_repeat 2 30 0 2835 87 14 0 chr2 248555188 248555558 -4701025 + THE1C LTR MaLR 1 375 0 216 67 0 0 chr2 248555683 248555713 -4700870 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 327 349 0 0 chr2 248556206 248556332 -4700251 + L1 LINE L1 4031 4156 -1990 405 347 47 52 chr2 248556335 248556718 -4699865 + L1 LINE L1 4207 4587 -1559 927 310 121 46 chr2 248557252 248557969 -4698614 - HAL1b LINE L1 -186 1162 392 390 21 0 0 chr2 248558044 248558091 -4698492 + (CA)n Simple_repeat Simple_repeat 2 48 0 290 233 45 60 chr2 248558145 248558278 -4698305 - HAL1b LINE L1 -997 351 221 26 0 0 0 chr2 248558800 248558826 -4697757 + AT_rich Low_complexity Low_complexity 1 26 0 619 213 103 0 chr2 248558912 248559048 -4697535 + MER20 DNA MER1_type 70 219 0 227 279 13 13 chr2 248559363 248559442 -4697141 - MER116 DNA Mariner 0 80 2 193 336 123 27 chr2 248559442 248559662 -4696921 - MIR SINE MIR -15 247 7 667 294 129 34 chr2 248559680 248560302 -4696281 + HAL1b LINE L1 60 740 -608 302 299 81 47 chr2 248560709 248561030 -4695553 + L1ME3A LINE L1 3830 4161 -1985 636 303 100 77 chr2 248561039 248561603 -4694980 + L1ME3A LINE L1 4274 4851 -1295 247 270 0 16 chr2 248561630 248561693 -4694890 + L1M1 LINE L1 5477 5538 -764 263 296 146 17 chr2 248561718 248561958 -4694625 + L1ME3A LINE L1 5543 5813 -351 22 0 0 0 chr2 248562371 248562393 -4694190 + AT_rich Low_complexity Low_complexity 1 22 0 2583 39 0 0 chr2 248562402 248562713 -4693870 + AluY SINE Alu 1 311 0 649 316 76 19 chr2 248562715 248563253 -4693330 + L1ME4a LINE L1 5384 5952 -169 219 88 0 0 chr2 248563262 248563296 -4693287 + (GA)n Simple_repeat Simple_repeat 1 34 0 361 48 0 32 chr2 248563696 248563758 -4692825 + (TA)n Simple_repeat Simple_repeat 2 61 0 234 324 74 9 chr2 248564836 248564944 -4691639 + MLT1I LTR MaLR 3 117 -292 413 276 37 8 chr2 248564957 248565091 -4691492 + MLT1I LTR MaLR 236 373 -36 870 245 33 95 chr2 248565707 248566074 -4690509 + L1ME3A LINE L1 5788 6131 -39 190 361 33 33 chr2 248566381 248566503 -4690080 + MIR SINE MIR 19 140 -68 23 0 0 0 chr2 248567223 248567246 -4689337 + AT_rich Low_complexity Low_complexity 1 23 0 2952 163 54 9 chr2 248567386 248567879 -4688704 + L1MC1 LINE L1 5725 6246 -87 405 0 0 0 chr2 248567879 248567924 -4688659 + (TG)n Simple_repeat Simple_repeat 2 46 0 2952 163 54 9 chr2 248567924 248567971 -4688612 + L1MC1 LINE L1 6246 6289 -44 225 349 0 0 chr2 248568417 248568500 -4688083 + C-rich Low_complexity Low_complexity 4 86 0 257 336 62 8 chr2 248569296 248569424 -4687159 + MIR SINE MIR 12 146 -116 190 225 0 25 chr2 248569621 248569661 -4686922 + L2 LINE L2 3267 3305 -8 2122 123 0 3 chr2 248569846 248570156 -4686427 + AluSc SINE Alu 1 309 0 358 217 89 34 chr2 248570157 248570305 -4686278 + L1M4 LINE L1 1032 3200 -1302 2013 127 0 0 chr2 248570997 248571309 -4685274 + AluSx SINE Alu 3 314 0 2189 99 0 0 chr2 248571941 248572235 -4684348 + AluSx SINE Alu 1 294 -18 204 135 0 0 chr2 248572521 248572558 -4684025 + (TGAA)n Simple_repeat Simple_repeat 2 38 0 612 73 0 0 chr2 248574940 248575022 -4681561 + (TA)n Simple_repeat Simple_repeat 1 82 0 213 367 0 0 chr2 248575479 248575577 -4681006 + G-rich Low_complexity Low_complexity 1 98 0 447 210 3 32 chr2 248576584 248576709 -4679874 - L1MCa LINE L1 -1339 6983 1995 330 344 0 0 chr2 248576711 248576801 -4679782 + L1MC4 LINE L1 6614 6703 -1339 * 434 267 0 0 chr2 248576787 248576877 -4679706 - L1MC4 LINE L1 -1339 6703 6614 1983 148 0 16 chr2 248577577 248577894 -4678689 + AluSx SINE Alu 1 312 0 387 0 0 0 chr2 248578325 248578368 -4678215 + (TG)n Simple_repeat Simple_repeat 1 43 0 517 220 72 80 chr2 248579133 248579527 -4677056 + MER113 DNA MER1_type? 63 476 -45 386 258 38 45 chr2 248579608 248579740 -4676843 - MIR SINE MIR -63 199 69 614 282 131 43 chr2 248579742 248580185 -4676398 - LTR33A LTR ERVL -6 517 36 759 154 0 8 chr2 248581774 248581897 -4674686 + MLT1B LTR MaLR 268 389 -1 21 57 0 0 chr2 248582515 248582550 -4674033 + AT_rich Low_complexity Low_complexity 1 35 0 5407 179 3 14 chr2 248582971 248583995 -4672588 + L1P LINE L1 3922 4934 -1212 1490 105 39 18 chr2 248584122 248584408 -4672175 + MER61-int LTR ERV1 2224 5099 -118 * 2311 153 80 45 chr2 248584407 248585192 -4671391 + pTR5 LTR ERV1 742 1604 -834 327 359 50 17 chr2 248586874 248587055 -4669528 - L1MC4 LINE L1 -547 7495 7309 395 283 58 39 chr2 248587067 248587272 -4669311 - L1MC5 LINE L1 -736 7225 7017 626 274 57 74 chr2 248589684 248589990 -4666593 + LTR37B LTR ERV1 1 298 -170 3435 151 23 81 chr2 248589990 248590723 -4665860 - LTR8 LTR ERV1 0 691 1 626 274 57 74 chr2 248590723 248590890 -4665693 + LTR37B LTR ERV1 298 466 -2 4365 142 46 16 chr2 248592111 248592872 -4663711 - LTR1 LTR ERV1 0 785 2 2042 97 11 0 chr2 248592872 248593223 -4663360 - AluSx SINE Alu 0 354 1 291 71 0 0 chr2 248593428 248593470 -4663113 + (TC)n Simple_repeat Simple_repeat 1 42 0 430 310 75 6 chr2 248593480 248593654 -4662929 + MIR SINE MIR 5 190 -72 227 227 0 0 chr2 248593895 248593939 -4662644 + L2 LINE L2 3217 3260 -12 1816 144 0 0 chr2 248594493 248594799 -4661784 + AluSx SINE Alu 1 306 0 183 80 0 0 chr2 248595731 248595756 -4660827 + (TCCC)n Simple_repeat Simple_repeat 2 26 0 426 284 54 130 chr2 248596811 248596928 -4659655 - MIR SINE MIR 0 262 138 925 95 7 7 chr2 248596928 248597076 -4659507 + (TTTC)n Simple_repeat Simple_repeat 4 151 0 1764 104 40 0 chr2 248597078 248597329 -4659254 - AluSq SINE Alu -50 263 3 426 284 54 130 chr2 248597329 248597469 -4659114 - MIR SINE MIR -125 137 22 1829 138 14 3 chr2 248597469 248597759 -4658824 - AluJo SINE Alu -11 301 9 251 269 269 6 chr2 248598773 248598929 -4657654 - MIR SINE MIR 0 262 66 282 306 81 38 chr2 248598998 248599158 -4657425 - MIR SINE MIR -76 186 20 1135 277 35 62 chr2 248599597 248600697 -4655886 - L1MCc LINE L1 -4598 2524 1293 451 240 38 118 chr2 248601329 248601568 -4655015 + MER41B LTR ERV1 57 430 -205 22 0 0 0 chr2 248601826 248601848 -4654735 + AT_rich Low_complexity Low_complexity 1 22 0 383 273 11 0 chr2 248601913 248602001 -4654582 - MER117 DNA MER1_type -107 90 2 1866 142 0 43 chr2 248602203 248602527 -4654056 + AluSx SINE Alu 1 310 -2 21 36 0 0 chr2 248602553 248602581 -4654002 + AT_rich Low_complexity Low_complexity 1 28 0 439 295 104 31 chr2 248602626 248602819 -4653764 + MIR SINE MIR 56 262 0 6157 58 7 0 chr2 248602954 248603708 -4652875 + L1PA7 LINE L1 5393 6151 -3 266 226 137 24 chr2 248603893 248604017 -4652566 - L1ME LINE L1 -338 5783 5646 189 107 0 0 chr2 248606782 248606810 -4649773 + (A)n Simple_repeat Simple_repeat 1 28 0 308 355 50 21 chr2 248607732 248607873 -4648710 - L2 LINE L2 -3 3269 3125 294 350 35 0 chr2 248607893 248608036 -4648547 - L2 LINE L2 -842 2472 2325 182 284 155 34 chr2 248608045 248608193 -4648390 - L2 LINE L2 -19 3253 3088 2066 125 0 3 chr2 248610458 248610753 -4645830 - AluSx SINE Alu -18 294 1 392 241 0 13 chr2 248610777 248610856 -4645727 - L2 LINE L2 0 3272 3195 206 136 23 0 chr2 248610982 248611026 -4645557 + (TG)n Simple_repeat Simple_repeat 1 45 0 892 195 14 36 chr2 248611315 248611536 -4645047 - L1MC3 LINE L1 0 7785 7570 * 3262 201 52 3 chr2 248611506 248612183 -4644400 - L1MC3 LINE L1 -924 6861 6152 253 303 217 0 chr2 248612208 248612360 -4644223 - L2 LINE L2 -623 2691 2507 246 313 90 8 chr2 248613737 248613871 -4642712 + L2 LINE L2 2952 3096 -176 188 268 14 0 chr2 248614268 248614339 -4642244 + (TATG)n Simple_repeat Simple_repeat 2 73 0 1619 122 0 8 chr2 248614939 248615177 -4641406 + AluSx SINE Alu 39 274 -38 334 310 5 0 chr2 248615835 248616026 -4640557 + (TG)n Simple_repeat Simple_repeat 1 192 0 299 264 181 21 chr2 248616056 248616200 -4640383 - MIR SINE MIR -26 236 70 312 252 30 53 chr2 248619214 248619345 -4637238 - LTR67 LTR ERVL -4 553 426 356 294 106 12 chr2 248619472 248619632 -4636951 - MLT1K LTR MaLR -411 177 3 319 300 55 0 chr2 248620077 248620187 -4636396 + MIR SINE MIR 31 146 -62 1990 170 9 42 chr2 248620976 248621122 -4635461 + L1MB3 LINE L1 5688 5837 -346 2073 113 0 0 chr2 248621122 248621405 -4635178 + AluSx SINE Alu 1 283 -29 1990 170 9 42 chr2 248621405 248621772 -4634811 + L1MB3 LINE L1 5837 6147 -36 538 286 118 49 chr2 248622930 248623335 -4633248 + L1ME LINE L1 5267 5699 -422 937 152 0 0 chr2 248623348 248623499 -4633084 - AluSp/q SINE Alu 0 313 163 235 222 170 15 chr2 248623514 248623649 -4632934 + L1ME LINE L1 5726 5881 -240 390 318 189 15 chr2 248623753 248624086 -4632497 + L1ME2 LINE L1 4910 5300 -846 482 228 4 63 chr2 248624087 248624177 -4632406 + L1ME2 LINE L1 5340 5434 -744 2223 105 60 26 chr2 248624177 248624529 -4632054 + THE1B LTR MaLR 1 364 0 482 228 4 63 chr2 248624529 248624653 -4631930 + L1ME2 LINE L1 5434 5610 -568 1154 125 16 42 chr2 248624692 248624884 -4631699 + THE1B LTR MaLR 116 302 -62 2749 128 11 11 chr2 248624960 248625419 -4631164 + MER1A DNA MER1_type 31 529 0 293 295 115 66 chr2 248625492 248625736 -4630847 + L1ME2 LINE L1 5909 6164 0 1185 175 5 0 chr2 248626224 248626435 -4630148 + AluJb SINE Alu 85 296 -16 194 340 113 31 chr2 248627265 248627362 -4629221 - L2 LINE L2 -9 3263 3159 4532 127 21 8 chr2 248627645 248628347 -4628236 + MER50 LTR ERV1 1 711 -23 509 290 117 26 chr2 248630433 248630664 -4625919 - L1M4 LINE L1 -3059 3087 2836 227 254 0 0 chr2 248630703 248630758 -4625825 + (CCCTAA)n Simple_repeat Simple_repeat 3 57 0 21 0 0 0 chr2 248631593 248631614 -4624969 + AT_rich Low_complexity Low_complexity 1 21 0 627 142 213 85 chr2 248631713 248631863 -4624720 - MER33 DNA MER1_type -2273 312 183 1684 163 17 7 chr2 248631863 248632157 -4624426 - AluJb SINE Alu -15 297 1 627 142 213 85 chr2 248632157 248632287 -4624296 - MER33 DNA MER1_type -2402 183 1 1507 179 105 14 chr2 248633045 248633397 -4623186 + MLT1B LTR MaLR 1 384 -6 632 195 47 58 chr2 248633632 248633822 -4622761 - MER53 DNA DNA 0 189 2 444 296 104 16 chr2 248633956 248634206 -4622377 + L1M4 LINE L1 5107 5378 -768 2147 101 7 0 chr2 248634950 248635247 -4621336 - AluSg SINE Alu -11 299 1 2404 140 18 5 chr2 248635670 248636055 -4620528 - MLT1B LTR MaLR 0 390 1 27 0 0 0 chr2 248636109 248636136 -4620447 + AT_rich Low_complexity Low_complexity 1 27 0 817 191 0 0 chr2 248637918 248638070 -4618513 + L1MD2 LINE L1 6208 6359 0 306 0 0 0 chr2 248638610 248638644 -4617939 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 4204 80 7 4 chr2 248639674 248640225 -4616358 - MER41A LTR ERV1 0 554 2 755 153 85 40 chr2 248640567 248640744 -4615839 + MER5A DNA MER1_type 3 187 -2 685 195 59 35 chr2 248643234 248643403 -4613180 - MER5A DNA MER1_type -16 173 1 566 231 163 6 chr2 248643412 248643572 -4613011 + MER5A DNA MER1_type 4 188 -1 220 260 123 0 chr2 248643572 248643643 -4612940 + L2 LINE L2 3185 3264 -49 1641 112 4 0 chr2 248646341 248646573 -4610010 + MER72 LTR ERV1 489 721 -1 3286 133 66 101 chr2 248646663 248647356 -4609227 + LTR8A LTR ERV1 1 667 -60 4280 119 25 6 chr2 248647356 248647988 -4608595 + LTR9B LTR ERV1 1 644 0 3286 133 66 101 chr2 248647988 248648047 -4608536 + LTR8A LTR ERV1 667 727 0 867 154 30 18 chr2 248648790 248648959 -4607624 - L1MA2 LINE L1 0 6304 6134 386 288 24 16 chr2 248649613 248649738 -4606845 + MIR SINE MIR 19 144 -64 508 298 56 0 chr2 248650725 248650886 -4605697 + MLT1H1 LTR MaLR 2 171 -424 528 239 72 72 chr2 248650908 248651085 -4605498 + MLT1H1 LTR MaLR 339 518 -37 2050 99 13 7 chr2 248651085 248651388 -4605195 - AluSp SINE Alu -8 305 1 528 239 72 72 chr2 248651388 248651419 -4605164 + MLT1H1 LTR MaLR 517 547 -8 281 98 0 0 chr2 248651440 248651481 -4605102 + MER57A LTR ERV1 1 41 -362 368 62 0 0 chr2 248651488 248651536 -4605047 - MADE1 DNA Mariner -2 78 31 2177 142 8 45 chr2 248651543 248651882 -4604701 + MER57A LTR ERV1 37 363 -40 1668 151 3 3 chr2 248651882 248652189 -4604394 + AluSq SINE Alu 1 307 0 2177 142 8 45 chr2 248652189 248652229 -4604354 + MER57A LTR ERV1 363 403 0 335 290 29 115 chr2 248652710 248652989 -4603594 - MLT1J LTR MaLR -143 368 114 229 179 45 0 chr2 248653233 248653300 -4603283 + (CA)n Simple_repeat Simple_repeat 1 70 0 186 349 16 16 chr2 248654305 248654368 -4602215 - L2 LINE L2 -73 3199 3137 227 271 0 83 chr2 248655473 248655569 -4601014 + MIR SINE MIR 109 196 -66 489 238 71 64 chr2 248655912 248656131 -4600452 - MLT1G1 LTR MaLR -282 260 42 2048 130 31 31 chr2 248656232 248656556 -4600027 + THE1B LTR MaLR 41 364 0 2442 261 75 14 chr2 248656557 248657330 -4599253 - L1ME3A LINE L1 -92 6078 5259 180 302 0 0 chr2 248657459 248657502 -4599081 + L2 LINE L2 2589 2631 -683 553 306 86 5 chr2 248657683 248657894 -4598689 + MIR SINE MIR 36 261 -1 369 318 116 6 chr2 248658254 248658426 -4598157 - MIR SINE MIR -57 151 11 21 0 0 0 chr2 248659212 248659233 -4597350 + AT_rich Low_complexity Low_complexity 1 21 0 294 270 183 0 chr2 248660686 248660823 -4595760 + MIR3 SINE MIR 41 202 -6 188 314 105 19 chr2 248662179 248662284 -4594299 + L2 LINE L2 415 528 -2786 2158 85 0 7 chr2 248662544 248662851 -4593732 + AluSx SINE Alu 1 305 0 206 337 154 37 chr2 248662875 248663225 -4593358 + L3 LINE CR1 1185 1575 -2 258 256 26 13 chr2 248663937 248664015 -4592568 + L2 LINE L2 2512 2590 -724 2518 111 16 5 chr2 248664109 248664478 -4592105 + THE1C LTR MaLR 1 373 -2 1012 277 130 15 chr2 248664615 248665262 -4591321 + L2 LINE L2 2612 3313 0 736 182 18 0 chr2 248665262 248665432 -4591151 + (TGGA)n Simple_repeat Simple_repeat 2 174 0 327 268 145 22 chr2 248665468 248665606 -4590977 - MER5B DNA MER1_type -15 163 9 735 152 64 0 chr2 248666335 248666460 -4590123 + AluJb SINE Alu 2 134 -178 535 296 6 0 chr2 248666810 248666972 -4589611 + LTR16C LTR ERVL 329 491 0 186 43 0 0 chr2 248668166 248668189 -4588394 + (TA)n Simple_repeat Simple_repeat 2 24 0 1823 103 0 4 chr2 248668441 248668683 -4587900 - AluSx SINE Alu -24 288 48 315 0 0 0 chr2 248668994 248669029 -4587554 + (TTTTG)n Simple_repeat Simple_repeat 3 37 0 456 315 65 13 chr2 248671465 248671850 -4584733 + LTR33 LTR ERVL 103 521 0 2539 137 67 2 chr2 248671890 248672291 -4584292 + MSTA LTR MaLR 1 427 -1 790 141 31 43 chr2 248672416 248672579 -4584004 + MER20 DNA MER1_type 2 162 -57 2066 139 3 3 chr2 248674028 248674323 -4582260 + AluSx SINE Alu 5 299 -13 2126 191 5 0 chr2 248674518 248674906 -4581677 + MLT1B LTR MaLR 1 390 0 211 264 19 0 chr2 248675376 248675429 -4581154 + GA-rich Low_complexity Low_complexity 2 55 0 474 313 88 34 chr2 248676570 248676671 -4579912 - L2 LINE L2 -4 3309 3215 1777 166 152 8 chr2 248676671 248677045 -4579538 + MSTA LTR MaLR 1 428 0 474 313 88 34 chr2 248677045 248677409 -4579174 - L2 LINE L2 -98 3215 2819 2018 168 33 18 chr2 248677467 248677865 -4578718 + L1MB2 LINE L1 5766 6169 -2 2314 112 0 3 chr2 248678201 248678506 -4578077 + AluSg SINE Alu 1 304 -6 475 244 64 32 chr2 248678726 248678882 -4577701 + MER69A DNA AcHobo 2 162 -15 231 98 49 33 chr2 248679563 248679624 -4576959 + A-rich Low_complexity Low_complexity 4 65 0 310 319 62 59 chr2 248679756 248679902 -4576681 + L1ME LINE L1 5527 5676 -445 2200 114 3 3 chr2 248679902 248680201 -4576382 + AluSx SINE Alu 1 299 -13 310 319 62 59 chr2 248680201 248680327 -4576256 + L1ME LINE L1 5676 5800 -321 2362 84 0 10 chr2 248681182 248681492 -4575091 - AluSc SINE Alu -2 307 1 222 162 0 0 chr2 248681752 248681789 -4574794 + MIR SINE MIR 205 241 -21 243 88 0 0 chr2 248681814 248681848 -4574735 + (TTA)n Simple_repeat Simple_repeat 3 36 0 208 310 20 20 chr2 248682509 248682609 -4573974 - L2 LINE L2 0 3313 3214 270 143 0 0 chr2 248682768 248682817 -4573766 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 2642 187 19 37 chr2 248682820 248683165 -4573418 - MLT2B3 LTR ERVL -24 530 197 423 0 0 0 chr2 248683165 248683212 -4573371 + (TG)n Simple_repeat Simple_repeat 2 48 0 2642 187 19 37 chr2 248683212 248683406 -4573177 - MLT2B3 LTR ERVL -357 197 1 194 214 321 0 chr2 248683742 248683798 -4572785 + L2 LINE L2 3238 3311 -2 337 349 15 8 chr2 248683802 248683934 -4572649 - MIR SINE MIR -111 151 19 2174 126 3 7 chr2 248686792 248687094 -4569489 + AluSx SINE Alu 1 301 -11 2420 181 29 4 chr2 248687171 248687534 -4569049 - L1PB4 LINE L1 0 6156 5778 2148 108 26 10 chr2 248687534 248687841 -4568742 - AluSx SINE Alu 0 312 1 2420 181 29 4 chr2 248687841 248687929 -4568654 - L1PB4 LINE L1 -378 5778 5694 630 153 10 0 chr2 248687929 248688027 -4568556 - U6 snRNA snRNA -1 106 8 219 310 28 0 chr2 248688066 248688137 -4568446 + MIR3 SINE MIR 105 177 -31 234 254 18 0 chr2 248691899 248691954 -4564629 + (CAA)n Simple_repeat Simple_repeat 2 57 0 1864 146 20 3 chr2 248692015 248692309 -4564274 - AluSx SINE Alu -13 299 1 895 152 8 0 chr2 248692310 248692442 -4564141 - AluSq/x SINE Alu -178 134 2 246 233 67 56 chr2 248692470 248692560 -4564023 - MIR SINE MIR -118 144 54 192 158 0 0 chr2 248692854 248692892 -4563691 + A-rich Low_complexity Low_complexity 1 38 0 2369 89 20 3 chr2 248693348 248693652 -4562931 - AluSg1 SINE Alu 0 309 1 2325 119 3 0 chr2 248694724 248695035 -4561548 + AluSx SINE Alu 1 312 0 405 58 0 0 chr2 248695038 248695090 -4561493 + (GGGA)n Simple_repeat Simple_repeat 4 55 0 1093 81 23 12 chr2 248695090 248695262 -4561321 + (GAAA)n Simple_repeat Simple_repeat 4 177 0 22 0 0 0 chr2 248695913 248695935 -4560648 + AT_rich Low_complexity Low_complexity 1 22 0 340 281 56 51 chr2 248696737 248696933 -4559650 + MLT1K LTR MaLR 326 522 -66 274 132 0 41 chr2 248697121 248697175 -4559408 - MLT1H LTR MaLR 0 549 504 241 267 109 30 chr2 248697255 248697356 -4559227 - MLT1H LTR MaLR -399 150 42 1496 268 85 72 chr2 248697522 248699056 -4557527 - L2 LINE L2 0 3313 1764 285 266 109 31 chr2 248700470 248700598 -4555985 - MIR SINE MIR -48 214 77 2099 144 0 0 chr2 248701401 248701699 -4554884 - AluSx SINE Alu -14 298 1 1029 172 31 48 chr2 248702418 248702645 -4553938 + L1MA10 LINE L1 6105 6327 -7 572 286 59 14 chr2 248704288 248704508 -4552075 - MIR SINE MIR -30 232 3 336 260 227 7 chr2 248704806 248705161 -4551422 + L2 LINE L2 2683 3110 -203 249 211 46 92 chr2 248705583 248705692 -4550891 + L2 LINE L2 3148 3251 -62 203 156 0 0 chr2 248707330 248707362 -4549221 + (TG)n Simple_repeat Simple_repeat 2 33 0 198 0 0 0 chr2 248707819 248707841 -4548742 + (T)n Simple_repeat Simple_repeat 1 22 0 247 133 0 22 chr2 248708118 248708163 -4548420 - MSTC LTR MaLR -384 44 1 2044 141 0 0 chr2 248708278 248708569 -4548014 + AluSx SINE Alu 1 291 -21 214 346 0 0 chr2 248709321 248709448 -4547135 + T-rich Low_complexity Low_complexity 1 127 0 2264 112 0 0 chr2 248709750 248710037 -4546546 + AluSx SINE Alu 1 287 -25 180 0 0 0 chr2 248710040 248710060 -4546523 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 243 298 256 8 chr2 248710218 248710339 -4546244 - MIR SINE MIR -72 190 40 2221 118 0 0 chr2 248711443 248711740 -4544843 - AluSx SINE Alu -15 297 1 22 0 0 0 chr2 248712615 248712637 -4543946 + AT_rich Low_complexity Low_complexity 1 22 0 337 173 109 82 chr2 248714155 248714201 -4542382 - MLT1C LTR MaLR -354 113 70 844 259 148 25 chr2 248714201 248714525 -4542058 - MLT1A1 LTR MaLR 0 365 2 337 173 109 82 chr2 248714525 248714588 -4541995 - MLT1C LTR MaLR -397 70 1 25 31 0 0 chr2 248715511 248715543 -4541040 + AT_rich Low_complexity Low_complexity 1 32 0 1768 195 80 50 chr2 248715741 248716219 -4540364 - MLT1D LTR MaLR -5 500 9 621 260 179 38 chr2 248716270 248716650 -4539933 + L1M4 LINE L1 2473 2798 -3348 1721 174 10 20 chr2 248716650 248716944 -4539639 + AluJb SINE Alu 3 293 -19 621 260 179 38 chr2 248716944 248717282 -4539301 + L1M4 LINE L1 2798 3305 -2841 1262 121 5 32 chr2 248717296 248717486 -4539097 + AluSx SINE Alu 1 185 -127 367 226 128 55 chr2 248717486 248717721 -4538862 + L1M4 LINE L1 4632 4883 -1263 4251 159 23 24 chr2 248718014 248719248 -4537335 + L1MA5A LINE L1 4754 5980 -317 253 200 116 42 chr2 248719376 248719471 -4537112 - L2 LINE L2 0 3272 3171 212 324 41 28 chr2 248723573 248723718 -4532865 - L2 LINE L2 -314 2958 2812 441 274 56 17 chr2 248723831 248724010 -4532573 + L1ME LINE L1 4466 4651 -1495 1839 132 54 80 chr2 248724037 248724424 -4532159 + MLT1B LTR MaLR 1 377 -13 270 316 11 0 chr2 248724485 248724580 -4532003 + L1ME LINE L1 4741 4836 -1310 299 325 112 16 chr2 248724653 248724841 -4531742 + L1ME LINE L1 5595 5800 -370 4029 260 77 30 chr2 248724852 248726394 -4530189 - L1MEc LINE L1 -4738 1658 45 270 0 0 0 chr2 248727199 248727229 -4529354 + (TG)n Simple_repeat Simple_repeat 2 31 0 21 0 0 0 chr2 248727353 248727374 -4529209 + AT_rich Low_complexity Low_complexity 1 21 0 526 282 85 32 chr2 248728658 248728906 -4527677 - LTR33A LTR ERVL -4 519 259 834 181 23 0 chr2 248729123 248729300 -4527283 - MER53 DNA DNA -1 188 8 291 54 0 0 chr2 248730729 248730766 -4525817 + (CTG)n Simple_repeat Simple_repeat 2 38 0 586 188 43 9 chr2 248730797 248730924 -4525659 + Charlie5 DNA MER1_type 1 124 -2488 1608 190 40 16 chr2 248730928 248731301 -4525282 + Charlie5 DNA MER1_type 2238 2619 0 274 145 0 48 chr2 248733343 248733405 -4523178 - L1ME4a LINE L1 -66 6055 5997 198 191 0 0 chr2 248733595 248733637 -4522946 + (TATG)n Simple_repeat Simple_repeat 2 43 0 2134 151 61 22 chr2 248733733 248733920 -4522663 + MSTA LTR MaLR 1 179 -249 2187 128 0 0 chr2 248733920 248734216 -4522367 + AluSx SINE Alu 1 296 -16 2134 151 61 22 chr2 248734216 248734439 -4522144 + MSTA LTR MaLR 179 427 -1 324 218 126 11 chr2 248734487 248734574 -4522009 + LTR16B LTR ERVL 98 194 -270 291 277 45 32 chr2 248734647 248734802 -4521781 + LTR16B LTR ERVL 298 454 -10 341 181 121 0 chr2 248738117 248738200 -4518383 - MIR SINE MIR -66 196 104 550 261 79 5 chr2 248738674 248738883 -4517700 - MLT1D LTR MaLR -1 653 337 1147 154 0 0 chr2 248738885 248739054 -4517529 - AluSx SINE Alu -143 169 1 759 285 22 22 chr2 248740124 248740352 -4516231 + MIR SINE MIR 7 234 -28 468 211 37 0 chr2 248740354 248740463 -4516120 - MIR SINE MIR -11 251 139 309 246 171 85 chr2 248740570 248740769 -4515814 + MLT1K LTR MaLR 126 341 -247 2133 111 0 4 chr2 248742006 248742315 -4514268 - AluSc SINE Alu 0 308 1 3832 168 65 28 chr2 248742467 248743225 -4513358 + LTR48 LTR ERV1 2 787 0 257 292 80 44 chr2 248743271 248743384 -4513199 - MLT1D LTR MaLR -313 236 120 410 274 110 0 chr2 248743449 248743595 -4512988 - L1MC4a LINE L1 -1977 5831 5670 1730 226 63 16 chr2 248743623 248744069 -4512514 - MLT1C LTR MaLR 0 467 1 770 266 108 13 chr2 248744071 248744376 -4512207 - L1MC4a LINE L1 -2192 5616 5283 2551 138 78 0 chr2 248745254 248745651 -4510932 + MSTC LTR MaLR 1 428 0 391 297 163 44 chr2 248745680 248746023 -4510560 - L1MC4a LINE L1 -1000 5146 4763 4413 144 90 34 chr2 248746133 248746346 -4510237 + MER4D LTR ERV1 2 202 -701 2352 94 7 13 chr2 248746346 248746653 -4509930 + AluY SINE Alu 1 305 -6 4413 144 90 34 chr2 248746653 248747293 -4509290 + MER4D LTR ERV1 202 903 0 974 222 0 24 chr2 248747352 248747559 -4509024 + MLT1E LTR MaLR 355 556 -37 286 233 17 0 chr2 248747678 248747738 -4508845 + L2 LINE L2 3232 3292 -21 364 221 115 26 chr2 248748007 248748120 -4508463 + MIR SINE MIR 13 135 -127 399 301 20 7 chr2 248749837 248749990 -4506593 + MER117 DNA MER1_type 1 155 -42 2771 113 34 7 chr2 248750401 248750818 -4505765 + MSTA LTR MaLR 1 428 0 263 100 0 0 chr2 248750945 248750985 -4505598 - L2 LINE L2 -3 3269 3230 530 267 51 23 chr2 248752606 248752823 -4503760 + LTR33 LTR ERVL 1 223 -298 1758 122 0 4 chr2 248752967 248753212 -4503371 + AluSx SINE Alu 32 275 -37 3774 209 61 21 chr2 248753225 248754817 -4501766 - L1MB7 LINE L1 -128 6867 5194 1839 112 37 104 chr2 248754817 248755000 -4501583 + THE1C LTR MaLR 1 144 -231 1900 92 78 14 chr2 248755000 248755283 -4501300 - AluSx SINE Alu -11 301 1 1839 112 37 104 chr2 248755283 248755501 -4501082 + THE1C LTR MaLR 144 375 0 3774 209 61 21 chr2 248755501 248755605 -4500978 - L1MB7 LINE L1 -1801 5194 5096 1748 161 116 65 chr2 248755618 248756172 -4500411 - MER4A LTR ERV1 0 465 1 1872 221 11 9 chr2 248756172 248756612 -4499971 - L1MB7 LINE L1 -1872 5085 4645 2487 243 25 12 chr2 248756628 248757187 -4499396 - L1MB7 LINE L1 -6257 602 37 599 236 36 56 chr2 248757194 248757345 -4499238 + LTR33 LTR ERVL 331 479 -42 1793 103 80 114 chr2 248757345 248757515 -4499068 + THE1C LTR MaLR 2 176 -199 2098 93 32 4 chr2 248757515 248757795 -4498788 - AluSc SINE Alu -21 288 1 1793 103 80 114 chr2 248757795 248758011 -4498572 + THE1C LTR MaLR 176 375 0 599 236 36 56 chr2 248758011 248758054 -4498529 + LTR33 LTR ERVL 479 521 0 2599 163 21 2 chr2 248758475 248758893 -4497690 - MSTB LTR MaLR 0 426 1 3613 203 100 29 chr2 248760043 248760392 -4496191 + MER45B DNA AcHobo 85 408 -1173 3209 85 18 5 chr2 248760392 248760432 -4496151 - MLT2A1 LTR ERVL 0 444 406 210 37 0 0 chr2 248760432 248760459 -4496124 + (TA)n Simple_repeat Simple_repeat 1 27 0 3209 85 18 5 chr2 248760459 248760855 -4495728 - MLT2A1 LTR ERVL -38 406 2 3613 203 100 29 chr2 248760855 248761398 -4495185 + MER45B DNA AcHobo 408 1040 0 325 183 22 131 chr2 248761562 248761699 -4494884 - L2 LINE L2 -544 2770 2649 205 136 45 0 chr2 248762729 248762773 -4493810 + (CA)n Simple_repeat Simple_repeat 2 47 0 25 0 0 0 chr2 248763369 248763394 -4493189 + AT_rich Low_complexity Low_complexity 1 25 0 183 42 0 0 chr2 248763425 248763449 -4493134 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1826 143 0 37 chr2 248763987 248764309 -4492274 + AluJo SINE Alu 1 310 -2 389 237 267 0 chr2 248767609 248767744 -4488839 + MIR SINE MIR 31 201 -61 1547 110 0 5 chr2 248770180 248770389 -4486194 + AluSg/x SINE Alu 80 287 -25 413 293 70 54 chr2 248770623 248770865 -4485718 + MIR SINE MIR 5 250 -12 204 40 0 0 chr2 248772639 248772664 -4483919 + (T)n Simple_repeat Simple_repeat 1 25 0 376 284 47 103 chr2 248773958 248774190 -4482393 - L3 LINE CR1 -255 1322 1104 24 0 0 0 chr2 248774239 248774263 -4482320 + AT_rich Low_complexity Low_complexity 1 24 0 380 197 189 8 chr2 248774488 248774615 -4481968 + L1MC4 LINE L1 5711 5860 -1948 22 56 0 0 chr2 248774935 248774971 -4481612 + AT_rich Low_complexity Low_complexity 1 36 0 840 289 34 20 chr2 248775051 248775349 -4481234 + L1MC4 LINE L1 6700 7001 -1041 272 206 16 32 chr2 248775393 248775456 -4481127 - L1MC5 LINE L1 -891 7070 7009 244 347 50 35 chr2 248775859 248776058 -4480525 + LTR16C LTR ERVL 218 419 -72 318 299 55 16 chr2 248776157 248776284 -4480299 + L1MC4 LINE L1 6572 6703 -1339 313 276 104 8 chr2 248776311 248776445 -4480138 + L1MC5 LINE L1 7331 7477 -484 494 280 125 27 chr2 248777057 248777496 -4479087 + L1MEc LINE L1 1142 1750 -4813 260 96 19 19 chr2 248777556 248777608 -4478975 + L1MEc LINE L1 2512 2563 -3819 486 153 168 8 chr2 248777626 248777829 -4478754 - MER2 DNA MER2_type -1 344 54 807 118 0 0 chr2 248777930 248778057 -4478526 + L1MA5A LINE L1 6171 6297 0 487 182 91 62 chr2 248778177 248778267 -4478316 + L1MC4 LINE L1 5255 5341 -2467 348 43 0 0 chr2 248778267 248778313 -4478270 + (CA)n Simple_repeat Simple_repeat 1 46 0 487 182 91 62 chr2 248778313 248778431 -4478152 + L1MC4 LINE L1 5341 5469 -2339 9689 177 46 20 chr2 248778441 248780950 -4475633 + L1MA6 LINE L1 3535 6091 -209 373 188 14 0 chr2 248781015 248781084 -4475499 + L1MC4 LINE L1 6750 6819 -1223 * 1476 284 92 39 chr2 248781083 248782990 -4473593 + L1MEc LINE L1 36 2062 -4334 1013 177 35 10 chr2 248782997 248783195 -4473388 - MER3 DNA MER1_type -6 203 1 3158 232 90 9 chr2 248783195 248784324 -4472259 + L1MEc LINE L1 2057 3227 -2988 445 221 110 8 chr2 248784347 248784474 -4472109 + L1MC4 LINE L1 6805 6944 -1098 1575 216 165 2 chr2 248784576 248785066 -4471517 + L1MC4 LINE L1 7178 7747 -295 606 259 30 7 chr2 248785066 248785201 -4471382 + MER58A DNA MER1_type 1 138 0 359 268 29 58 chr2 248885202 248885340 -4371243 + HAL1 LINE L1 924 1057 -1450 765 141 25 0 chr2 248885344 248885465 -4371118 - AluSq/x SINE Alu -179 133 10 1159 130 0 0 chr2 248885466 248885628 -4370955 + AluSg/x SINE Alu 137 298 -14 1689 256 79 46 chr2 248885629 248886456 -4370127 + HAL1 LINE L1 1062 1915 -592 210 216 0 0 chr2 248887291 248887328 -4369255 + polypyrimidine Low_complexity Low_complexity 2 38 0 2081 151 0 16 chr2 248887568 248887885 -4368698 - AluJo SINE Alu 0 312 1 185 342 79 18 chr2 248888472 248888586 -4367997 + MIR3 SINE MIR 15 135 -73 2184 117 16 19 chr2 248888586 248888972 -4367611 - AluSg SINE Alu 0 385 1 214 121 17 52 chr2 248889700 248889758 -4366825 + GA-rich Low_complexity Low_complexity 2 57 0 195 343 117 22 chr2 248890702 248890839 -4365744 - MIR SINE MIR -79 183 34 283 274 119 30 chr2 248891028 248891196 -4365387 + MIR SINE MIR 73 255 -7 566 202 37 0 chr2 248891368 248891477 -4365106 - MER45A DNA AcHobo -28 150 38 347 187 15 15 chr2 248892554 248892756 -4363827 + CT-rich Low_complexity Low_complexity 1 202 0 1655 112 37 0 chr2 248893062 248893323 -4363260 + AluSq SINE Alu 60 328 0 13768 35 4 4 chr2 248895714 248898229 -4358354 - L1PA5 LINE L1 -16 6138 3627 670 317 31 31 chr2 248898324 248898643 -4357940 + MER102b DNA MER1_type 20 338 -3 675 35 83 0 chr2 248898830 248898974 -4357609 + (CA)n Simple_repeat Simple_repeat 2 157 0 628 273 21 16 chr2 248898974 248899161 -4357422 - LTR33A LTR ERVL -333 190 3 224 351 48 6 chr2 248900058 248900226 -4356357 + G-rich Low_complexity Low_complexity 6 180 0 241 232 27 60 chr2 248900261 248900446 -4356137 + (TGG)n Simple_repeat Simple_repeat 2 180 0 1413 94 0 0 chr2 248900890 248901070 -4355513 + AluSg/x SINE Alu 129 308 -2 180 0 0 0 chr2 248901673 248901693 -4354890 + (CA)n Simple_repeat Simple_repeat 2 21 0 902 171 120 32 chr2 248901824 248902040 -4354543 - MER46A DNA MER2_type 0 236 2 470 261 29 22 chr2 248902073 248902211 -4354372 - MER5B DNA MER1_type -37 141 3 2363 101 0 7 chr2 248902755 248903063 -4353520 - AluSg SINE Alu -4 306 1 23 68 0 0 chr2 248903147 248903191 -4353392 + AT_rich Low_complexity Low_complexity 1 44 0 554 44 0 0 chr2 248903282 248903350 -4353233 + U6 snRNA snRNA 1 68 -39 649 206 0 6 chr2 248905527 248905891 -4350692 + (CA)n Simple_repeat Simple_repeat 1 361 0 705 255 4 0 chr2 248905917 248906182 -4350401 + (CA)n Simple_repeat Simple_repeat 1 266 0 1418 209 76 8 chr2 248907379 248907748 -4348835 - L1MC1 LINE L1 0 6333 5940 539 256 58 6 chr2 248908415 248908571 -4348012 + L1M4 LINE L1 5589 5752 -422 334 367 11 48 chr2 248908699 248908887 -4347696 - L1 LINE L1 -2233 3913 3733 615 209 22 22 chr2 248908898 248909032 -4347551 + AluJo SINE Alu 2 135 -177 708 286 23 0 chr2 248909774 248909991 -4346592 - MER58A DNA MER1_type -2 222 1 1939 156 0 0 chr2 248910567 248910877 -4345706 + AluSx SINE Alu 1 310 0 1698 182 58 17 chr2 248911118 248911531 -4345052 + MLT1C LTR MaLR 38 467 0 290 121 0 136 chr2 248912076 248912142 -4344441 - MLT2D LTR ERVL 0 414 358 696 115 20 20 chr2 248912147 248912295 -4344288 + GA-rich Low_complexity Low_complexity 1 148 0 808 170 32 75 chr2 248912405 248912536 -4344047 - MSTB1 LTR MaLR -252 180 58 2245 125 0 3 chr2 248912536 248912847 -4343736 - AluSx SINE Alu -2 310 1 808 170 32 75 chr2 248912847 248912903 -4343680 - MSTB1 LTR MaLR -374 58 1 227 221 177 89 chr2 248914438 248914495 -4342088 - MER5B DNA MER1_type -2 176 125 1951 157 0 13 chr2 248914495 248914800 -4341783 + AluJb SINE Alu 1 301 -11 227 221 177 89 chr2 248914800 248914900 -4341683 - MER5B DNA MER1_type -53 125 5 * 359 319 0 9 chr2 248914889 248915005 -4341578 + L2 LINE L2 3153 3267 -5 2116 124 37 0 chr2 248915497 248915795 -4340788 - AluSq SINE Alu -4 309 1 24 0 0 0 chr2 248915880 248915904 -4340679 + AT_rich Low_complexity Low_complexity 1 24 0 273 167 0 0 chr2 248915913 248915955 -4340628 + L1MC4 LINE L1 6961 7002 -1040 391 350 132 19 chr2 248915970 248916341 -4340242 + L1MC4 LINE L1 7086 7498 -544 317 335 141 29 chr2 248916323 248916711 -4339872 + L1MC4 LINE L1 7312 7840 -202 * 1470 210 34 22 chr2 248916715 248917072 -4339511 - L1MB5 LINE L1 -65 6109 5749 1070 166 26 57 chr2 248917073 248917302 -4339281 + MLT1A1 LTR MaLR 1 222 -143 263 28 28 0 chr2 248918228 248918264 -4338319 + (TG)n Simple_repeat Simple_repeat 2 38 0 194 0 39 0 chr2 248918265 248918291 -4338292 + (GA)n Simple_repeat Simple_repeat 2 28 0 183 156 0 0 chr2 248918532 248918564 -4338019 + (CTCA)n Simple_repeat Simple_repeat 4 35 0 22 35 0 0 chr2 248919098 248919127 -4337456 + AT_rich Low_complexity Low_complexity 1 29 0 239 290 73 32 chr2 248919147 248919271 -4337312 + L2 LINE L2 3183 3311 -2 371 277 20 0 chr2 248919668 248919769 -4336814 + MER103 DNA DNA 20 122 -44 889 133 8 0 chr2 248920558 248920686 -4335897 + FLAM_C SINE Alu 1 129 -4 265 309 39 55 chr2 248920697 248920878 -4335705 - MIR SINE MIR -38 224 47 2297 61 249 8 chr2 248921163 248921524 -4335059 - LTR7 LTR ERV1 -2 448 1 2317 83 62 13 chr2 248921524 248921898 -4334685 - HERVH LTR ERV1 0 7713 7322 1353 134 18 5 chr2 248921896 248922113 -4334470 - HERVH LTR ERV1 -1894 5819 5600 * 4404 126 3 1 chr2 248922114 248922775 -4333808 - HERVH LTR ERV1 -2564 5149 4488 3433 95 4 6 chr2 248922777 248923280 -4333303 - HERVH LTR ERV1 -3720 3993 3492 885 154 13 0 chr2 248923270 248923419 -4333164 - HERVH LTR ERV1 -4423 3290 3140 * 16035 97 14 36 chr2 248923415 248926570 -4330013 - HERVH LTR ERV1 -4728 2985 1 2854 66 90 28 chr2 248926572 248926994 -4329589 - LTR7 LTR ERV1 -2 448 1 276 253 24 0 chr2 248927016 248927099 -4329484 + MER45 DNA AcHobo 1 85 -955 2188 201 119 16 chr2 248927467 248928045 -4328538 - MLT1E1 LTR MaLR -5 649 12 203 346 58 19 chr2 248928342 248928446 -4328137 + MIR3 SINE MIR 90 197 -11 211 399 22 29 chr2 248928853 248928991 -4327592 - L3 LINE CR1 -2 1575 1439 1973 124 13 3 chr2 248930000 248930298 -4326285 + AluSx SINE Alu 6 306 -6 2095 125 3 10 chr2 248930303 248930616 -4325967 + AluJb SINE Alu 1 311 -1 418 198 0 0 chr2 248930625 248930706 -4325877 - MIR SINE MIR -14 248 168 596 313 139 11 chr2 248930708 248931270 -4325313 + MER115 DNA AcHobo 25 689 -4 571 314 168 16 chr2 248931711 248932475 -4324108 + L2 LINE L2 1785 2664 -650 1656 153 44 20 chr2 248933241 248933536 -4323047 - AluSx SINE Alu -4 308 7 204 172 0 0 chr2 248935084 248935142 -4321441 + (TG)n Simple_repeat Simple_repeat 1 58 0 331 343 75 0 chr2 248935920 248936054 -4320529 + L1ME LINE L1 5674 5817 -345 2027 118 10 0 chr2 248936276 248936565 -4320018 - AluSx SINE Alu -20 292 1 1019 110 35 23 chr2 248936787 248936960 -4319623 - L1PB1 LINE L1 -1 6150 5976 1390 231 129 0 chr2 248937074 248937424 -4319159 - MSTD LTR MaLR 0 396 2 202 182 0 0 chr2 248937527 248937560 -4319023 - MIR SINE MIR -21 241 209 287 208 0 0 chr2 248937582 248937630 -4318953 - MER5B DNA MER1_type 0 178 131 264 122 0 0 chr2 248937632 248937673 -4318910 + (T)n Simple_repeat Simple_repeat 1 41 0 905 231 91 54 chr2 248938189 248938561 -4318022 + L1MC5 LINE L1 7101 7486 -475 333 265 95 16 chr2 248938572 248938761 -4317822 + L1MC5 LINE L1 7724 7927 -34 1275 147 0 10 chr2 248939265 248939462 -4317121 + AluSg/x SINE Alu 99 293 -17 315 71 0 0 chr2 248940033 248940075 -4316508 + (A)n Simple_repeat Simple_repeat 1 42 0 359 309 69 17 chr2 248940195 248940370 -4316213 + MIR3 SINE MIR 21 204 -4 569 323 20 0 chr2 248940819 248941014 -4315569 + MIR SINE MIR 36 234 -28 1977 109 3 11 chr2 248941990 248942420 -4314163 - AluSq SINE Alu 0 428 1 391 292 63 45 chr2 248942676 248942967 -4313616 - MLT1I LTR MaLR -2 547 98 2126 104 3 28 chr2 248942999 248943317 -4313266 + AluSq SINE Alu 1 310 -3 193 398 11 0 chr2 248945744 248945832 -4310751 - L2 LINE L2 0 3313 3225 412 226 0 32 chr2 248946467 248946560 -4310023 + MER58B DNA MER1_type 234 323 -18 1062 163 60 0 chr2 248947621 248947805 -4308778 - AluJb SINE Alu -23 289 95 1785 117 23 0 chr2 248947832 248948096 -4308487 - AluSx SINE Alu -8 304 35 872 136 0 0 chr2 248949400 248949532 -4307051 + AluSq/x SINE Alu 1 132 -180 23 0 0 0 chr2 248949532 248949555 -4307028 + AT_rich Low_complexity Low_complexity 1 23 0 1633 177 53 0 chr2 248949565 248949848 -4306735 - AluJb SINE Alu -14 298 1 1507 215 80 15 chr2 248950281 248950681 -4305902 + MLT1C LTR MaLR 42 467 0 315 0 0 0 chr2 248951025 248951060 -4305523 + (TG)n Simple_repeat Simple_repeat 2 36 0 281 271 7 0 chr2 248952789 248952944 -4303639 + (CA)n Simple_repeat Simple_repeat 1 156 0 814 132 7 7 chr2 248955860 248955996 -4300587 - MSTB1 LTR MaLR 0 432 297 2122 121 0 0 chr2 248956201 248956499 -4300084 - AluSg SINE Alu -12 298 1 1694 174 0 20 chr2 248956501 248956805 -4299778 - AluJb SINE Alu -14 298 1 1820 196 127 14 chr2 248956881 248957299 -4299284 + MLT1C LTR MaLR 3 467 0 2293 86 7 0 chr2 248957328 248957629 -4298954 - AluSx SINE Alu -9 303 1 1307 161 70 66 chr2 248957927 248958213 -4298370 - AluJo SINE Alu -15 287 1 495 229 93 0 chr2 248959047 248959165 -4297418 + MIR SINE MIR 49 177 -85 2868 175 47 13 chr2 248959173 248959705 -4296878 - MER21A LTR ERV1 -6 925 376 1230 175 20 16 chr2 248959710 248959961 -4296622 - MER21A LTR ERV1 -667 264 13 274 351 61 6 chr2 248960888 248961053 -4295530 - MIR SINE MIR -74 188 15 531 359 73 0 chr2 248961286 248961545 -4295038 - L2 LINE L2 -737 2577 2300 544 267 94 113 chr2 248962202 248962547 -4294036 + L1ME LINE L1 38 371 -5699 894 144 0 0 chr2 248962547 248962679 -4293904 - FLAM_C SINE Alu -1 132 1 544 267 94 113 chr2 248962679 248962835 -4293748 + L1ME LINE L1 371 529 -5541 1148 244 126 43 chr2 248963162 248963576 -4293007 + MLT1C LTR MaLR 13 460 -7 423 331 107 13 chr2 248963627 248964002 -4292581 - L2 LINE L2 -352 2962 2553 424 236 0 101 chr2 248964025 248964224 -4292359 + G-rich Low_complexity Low_complexity 1 179 0 21 36 0 0 chr2 248966008 248966036 -4290547 + AT_rich Low_complexity Low_complexity 1 28 0 1900 141 16 19 chr2 248966082 248966395 -4290188 + AluJb SINE Alu 1 312 0 246 32 0 0 chr2 248967126 248967157 -4289426 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1037 52 0 15 chr2 248967256 248967391 -4289192 + L1PA4 LINE L1 6023 6155 0 229 223 126 58 chr2 248967511 248967614 -4288969 - MIR3 SINE MIR -36 172 63 306 227 0 0 chr2 248969173 248969248 -4287335 + CT-rich Low_complexity Low_complexity 1 75 0 2046 113 10 0 chr2 248969249 248969540 -4287043 - AluSq SINE Alu -17 296 3 437 268 72 144 chr2 248969600 248969823 -4286760 - HAL1 LINE L1 -1663 844 607 1711 200 91 55 chr2 248969823 248970274 -4286309 + MLT1C LTR MaLR 1 467 0 437 268 72 144 chr2 248970274 248970663 -4285920 - HAL1 LINE L1 -1900 607 276 216 326 22 22 chr2 248970834 248970923 -4285660 + L2 LINE L2 3224 3312 -1 2320 62 0 20 chr2 248971251 248971557 -4285026 - AluSg SINE Alu -10 300 1 1819 113 0 8 chr2 248971912 248972177 -4284406 - AluSq SINE Alu -12 301 39 237 310 0 0 chr2 248972357 248972415 -4284168 - MLT1K LTR MaLR 0 588 531 340 312 71 35 chr2 248973086 248973256 -4283327 - MIR3 SINE MIR -26 182 7 743 239 77 11 chr2 248973906 248974166 -4282417 - LTR16A1 LTR ERVL -23 434 158 1254 243 110 72 chr2 248974178 248974517 -4282066 - MLT1E LTR MaLR 0 593 214 1803 208 25 14 chr2 248974517 248974878 -4281705 - MLT1A1 LTR MaLR 0 365 1 1254 243 110 72 chr2 248974878 248975101 -4281482 - MLT1E LTR MaLR -379 214 1 1372 208 55 0 chr2 248975992 248976281 -4280302 - MLT2D LTR ERVL -109 305 1 21 57 0 0 chr2 248976715 248976750 -4279833 + AT_rich Low_complexity Low_complexity 1 35 0 1620 188 3 28 chr2 248977489 248977809 -4278774 - AluJo SINE Alu 0 312 1 301 281 12 0 chr2 248979238 248979321 -4277262 + (CA)n Simple_repeat Simple_repeat 1 84 0 1743 149 30 30 chr2 248979388 248979851 -4276732 + MER51A LTR ERV1 1 548 -86 258 302 0 12 chr2 248979884 248979970 -4276613 + (CA)n Simple_repeat Simple_repeat 2 86 0 286 274 34 17 chr2 248980036 248980153 -4276430 + MIR SINE MIR 100 218 -44 2142 115 6 6 chr2 248980788 248981100 -4275483 - AluSx SINE Alu 0 312 1 668 266 13 0 chr2 248981299 248981457 -4275126 - MER63A DNA MER1_type -10 200 41 2150 109 3 0 chr2 248981947 248982251 -4274332 + AluSx SINE Alu 1 305 -7 326 228 54 107 chr2 248983804 248983903 -4272680 + MIR SINE MIR 7 95 -167 2250 69 0 36 chr2 248983903 248984209 -4272374 - AluY SINE Alu -16 295 1 326 228 54 107 chr2 248984209 248984309 -4272274 + MIR SINE MIR 95 199 -63 196 293 49 41 chr2 248984581 248984704 -4271879 + MIR SINE MIR 23 146 -62 658 282 106 37 chr2 248985513 248985946 -4270637 + LTR16C LTR ERVL 20 482 -9 278 185 0 0 chr2 248986362 248986416 -4270167 + MER53 DNA DNA 6 59 -130 599 141 0 10 chr2 248986416 248986515 -4270068 + MER4A LTR ERV1 1 98 -566 2595 106 28 13 chr2 248986517 248986913 -4269670 + MER4A LTR ERV1 263 664 0 510 159 80 0 chr2 248986913 248987026 -4269557 + MER53 DNA DNA 56 177 -12 249 212 21 74 chr2 248988083 248988272 -4268311 + (CCA)n Simple_repeat Simple_repeat 2 180 0 407 331 157 23 chr2 248988859 248989300 -4267283 + L2 LINE L2 2814 3313 0 467 298 70 23 chr2 248991104 248991275 -4265308 + MIR SINE MIR 37 215 -47 478 308 173 28 chr2 248991509 248991909 -4264674 + L2 LINE L2 2410 2867 -447 266 316 119 0 chr2 248991962 248992155 -4264428 + L2 LINE L2 2959 3174 -139 564 234 73 118 chr2 248992155 248992527 -4264056 + LTR49 LTR ERV1 1 355 -240 401 238 71 16 chr2 248992570 248992696 -4263887 + LTR48 LTR ERV1 613 745 -42 283 345 0 17 chr2 248992738 248992854 -4263729 + L2 LINE L2 3168 3281 -32 248 137 20 0 chr2 248993645 248993696 -4262887 + (CA)n Simple_repeat Simple_repeat 1 52 0 267 164 16 33 chr2 248993767 248993828 -4262755 - MER81 DNA DNA -1 113 54 310 225 45 34 chr2 248994486 248994575 -4262008 + MIR SINE MIR 113 202 -60 2493 169 22 5 chr2 248994877 248995326 -4261257 + LTR24 LTR ERV1 1 457 -10 183 80 0 0 chr2 248995435 248995460 -4261123 + (CA)n Simple_repeat Simple_repeat 1 25 0 2319 165 26 13 chr2 248995517 248995905 -4260678 + MSTD LTR MaLR 1 393 -3 1721 112 8 4 chr2 248997302 248997561 -4259022 + AluSx SINE Alu 53 312 0 1931 248 63 23 chr2 248997601 248998169 -4258414 + MER67C LTR ERV1 120 710 0 648 140 93 27 chr2 248998938 248999271 -4257312 + LTR24 LTR ERV1 1 467 0 782 261 101 4 chr2 248999700 248999938 -4256645 + MER70B LTR ERVL 63 323 -255 1997 128 3 0 chr2 249001599 249001897 -4254686 + AluSq SINE Alu 1 299 -14 1642 193 40 21 chr2 249001972 249002298 -4254285 + L1MB5 LINE L1 5794 6129 -45 2143 110 0 0 chr2 249002298 249002597 -4253986 + AluSx SINE Alu 8 306 -6 1642 193 40 21 chr2 249002597 249002644 -4253939 + L1MB5 LINE L1 6129 6174 0 3089 170 55 3 chr2 249002651 249003228 -4253355 - L1MB3 LINE L1 0 6183 5577 245 179 30 75 chr2 249003877 249003944 -4252639 + MLT1E1 LTR MaLR 579 642 -12 394 257 46 9 chr2 249003954 249004063 -4252520 - MIR SINE MIR -70 192 80 3028 87 37 16 chr2 249006243 249006678 -4249905 + MLT2A1 LTR ERVL 1 444 0 325 309 56 0 chr2 249010029 249010155 -4246428 - MER94 DNA DNA 0 134 2 197 33 33 0 chr2 249011492 249011522 -4245061 + (CAAAA)n Simple_repeat Simple_repeat 1 31 0 443 264 6 0 chr2 249012116 249012294 -4244289 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 610 211 11 0 chr2 249012319 249012494 -4244089 + (TCCA)n Simple_repeat Simple_repeat 3 179 0 420 242 6 22 chr2 249012552 249012734 -4243849 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 183 246 0 0 chr2 249012758 249012815 -4243768 + (TCCA)n Simple_repeat Simple_repeat 2 58 0 641 181 7 0 chr2 249012927 249013065 -4243518 + (TCCA)n Simple_repeat Simple_repeat 2 140 0 708 195 0 0 chr2 249013098 249013257 -4243326 + (TCCA)n Simple_repeat Simple_repeat 1 159 0 1143 94 0 0 chr2 249013293 249013473 -4243110 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 356 252 204 7 chr2 249014261 249014408 -4242175 + LTR50 LTR ERVL 30 205 -590 496 258 106 32 chr2 249014445 249014662 -4241921 + LTR50 LTR ERVL 444 676 -119 1789 92 23 0 chr2 249015594 249015855 -4240728 + MER39B LTR ERV1 1 267 -386 840 149 0 34 chr2 249015855 249016003 -4240580 + FLAM_C SINE Alu 1 143 0 1830 167 60 0 chr2 249016003 249016350 -4240233 + MER39B LTR ERV1 262 629 -24 187 303 97 42 chr2 249018539 249018704 -4237879 - MER5A DNA MER1_type -7 182 9 915 150 0 7 chr2 249018847 249018987 -4237596 + FLAM_C SINE Alu 5 143 0 285 182 0 0 chr2 249019026 249019081 -4237502 + (CA)n Simple_repeat Simple_repeat 1 55 0 225 0 0 0 chr2 249019329 249019354 -4237229 + (CA)n Simple_repeat Simple_repeat 1 25 0 273 128 0 0 chr2 249019748 249019795 -4236788 + (CA)n Simple_repeat Simple_repeat 2 48 0 4255 220 31 65 chr2 249021593 249021843 -4234740 + Charlie1a DNA MER1_type 2 259 -2502 2305 125 0 0 chr2 249021843 249022155 -4234428 + AluSx SINE Alu 1 312 0 4255 220 31 65 chr2 249022155 249022888 -4233695 + Charlie1a DNA MER1_type 259 939 -1822 2328 125 0 3 chr2 249022888 249023201 -4233382 + AluSx SINE Alu 1 312 0 4255 220 31 65 chr2 249023201 249023424 -4233159 + Charlie1a DNA MER1_type 939 1168 -287 1998 177 60 42 chr2 249023441 249023892 -4232691 + LTR2B LTR ERV1 32 490 0 1273 154 49 21 chr2 249023892 249024177 -4232406 + Charlie1a DNA MER1_type 1163 1455 0 834 247 25 54 chr2 249025677 249025736 -4230847 - MLT1D LTR MaLR -10 495 436 2276 106 0 10 chr2 249025736 249026061 -4230522 + AluSq SINE Alu 1 313 0 834 247 25 54 chr2 249026061 249026446 -4230137 - MLT1D LTR MaLR -69 436 2 2148 138 3 0 chr2 249027105 249027417 -4229166 - AluSq SINE Alu 0 313 1 611 235 21 46 chr2 249028114 249028352 -4228231 + L1MC5 LINE L1 7329 7560 -401 33 0 0 0 chr2 249028401 249028434 -4228149 + AT_rich Low_complexity Low_complexity 1 33 0 1821 95 4 81 chr2 249028436 249028709 -4227874 - AluSq SINE Alu -61 252 1 289 253 35 0 chr2 249028887 249028974 -4227609 + MIR SINE MIR 119 208 -54 601 306 108 27 chr2 249029207 249029726 -4226857 - L2 LINE L2 -540 2774 2214 910 216 11 5 chr2 249029752 249029942 -4226641 - MER3 DNA MER1_type -18 191 1 329 352 14 0 chr2 249029953 249030098 -4226485 - L2 LINE L2 -1103 2211 2065 395 294 65 52 chr2 249030173 249030208 -4226375 - L1ME4a LINE L1 -174 5947 5914 2100 162 0 3 chr2 249030208 249030517 -4226066 + AluJb SINE Alu 1 308 -4 395 294 65 52 chr2 249030517 249030712 -4225871 - L1ME4a LINE L1 -207 5914 5714 635 204 0 49 chr2 249030825 249030987 -4225596 + MER3 DNA MER1_type 56 209 0 1501 148 36 92 chr2 249032950 249033307 -4223276 + MER1B DNA MER1_type 1 337 0 1309 204 68 117 chr2 249034855 249035393 -4221190 + MLT1D LTR MaLR 1 467 0 523 247 160 19 chr2 249035452 249035715 -4220868 + L2 LINE L2 2260 2559 -755 229 282 48 0 chr2 249035850 249035953 -4220630 + L2 LINE L2 2820 2927 -386 231 262 155 12 chr2 249037671 249037755 -4218828 - MER5B DNA MER1_type 0 178 83 684 119 0 0 chr2 249037773 249037874 -4218709 - FLAM_C SINE Alu -9 134 34 524 199 180 0 chr2 249038115 249038252 -4218331 + MER5A DNA MER1_type 4 169 -20 526 181 0 9 chr2 249039904 249040009 -4216574 - FRAM SINE Alu -10 166 63 356 313 57 17 chr2 249041078 249041254 -4215329 + MIR3 SINE MIR 24 206 -2 256 262 62 89 chr2 249043355 249043531 -4213052 - MIR SINE MIR -68 140 1 394 329 91 22 chr2 249044654 249044885 -4211698 + MIR SINE MIR 16 262 0 400 222 86 0 chr2 249044891 249045036 -4211547 - L1MC4a LINE L1 -297 5824 5678 2304 89 24 0 chr2 249045180 249045472 -4211111 - AluSc SINE Alu -10 299 1 1376 263 92 10 chr2 249045594 249046104 -4210479 - L1MC4 LINE L1 -208 7834 7283 2408 90 10 6 chr2 249046130 249046441 -4210142 + AluSx SINE Alu 1 312 0 323 231 13 26 chr2 249046595 249046673 -4209910 - MIR SINE MIR -64 144 68 385 234 113 8 chr2 249047857 249047981 -4208602 + L2 LINE L2 3173 3309 -4 186 218 244 0 chr2 249048944 249049022 -4207561 - MIR SINE MIR -67 141 45 306 323 0 0 chr2 249050250 249050346 -4206237 + HERVL LTR ERVL 362 457 -4539 788 142 7 26 chr2 249050378 249050533 -4206050 + MER53 DNA DNA 24 175 -14 339 356 92 37 chr2 249050582 249050877 -4205706 + HERVL LTR ERVL 504 814 -4182 1368 333 42 37 chr2 249051135 249051913 -4204670 + HERVL LTR ERVL 1246 2027 -3737 844 341 53 16 chr2 249051918 249052451 -4204132 + HERVL LTR ERVL 2558 3124 -1900 313 330 127 9 chr2 249052449 249052815 -4203768 + HERVL LTR ERVL 3905 4334 -1430 * 836 240 19 17 chr2 249052888 249053127 -4203456 + L1MDb LINE L1 34 302 -6241 693 244 32 9 chr2 249053184 249053405 -4203178 + L1MDb LINE L1 1056 1281 -5262 256 259 161 18 chr2 249053439 249053551 -4203032 + MIR3 SINE MIR 32 159 -49 464 310 77 53 chr2 249053567 249054061 -4202522 + MLT1J LTR MaLR 3 508 -3 360 267 17 17 chr2 249054107 249054223 -4202360 - MIR SINE MIR -34 228 113 203 196 36 0 chr2 249054866 249054922 -4201661 + (CCCCG)n Simple_repeat Simple_repeat 3 60 0 180 77 0 0 chr2 249055679 249055705 -4200878 + (CCCCAA)n Simple_repeat Simple_repeat 1 26 0 458 281 167 5 chr2 249056439 249056869 -4199714 - LTR33 LTR ERVL -5 516 17 296 297 14 69 chr2 249057486 249057631 -4198952 - MIR SINE MIR -80 182 46 380 329 138 4 chr2 249059314 249059539 -4197044 - Tigger8 DNA MER2_type -94 572 318 197 178 22 0 chr2 249059560 249059605 -4196978 + CT-rich Low_complexity Low_complexity 3 48 0 232 225 256 39 chr2 249059886 249060015 -4196568 - LTR16C LTR ERVL -141 350 194 2478 91 10 44 chr2 249060439 249060825 -4195758 + THE1C LTR MaLR 1 373 -2 3344 216 14 21 chr2 249060900 249061457 -4195126 + L1MD2 LINE L1 4740 5299 -1060 1898 45 0 13 chr2 249061457 249061681 -4194902 + AluY SINE Alu 83 303 -8 3344 216 14 21 chr2 249061681 249062289 -4194294 + L1MD2 LINE L1 5299 5902 -457 243 322 94 27 chr2 249062734 249062883 -4193700 + MIR SINE MIR 25 183 -79 192 152 0 0 chr2 249063379 249063412 -4193171 + CT-rich Low_complexity Low_complexity 5 37 0 1739 187 0 16 chr2 249066062 249066441 -4190142 - L1MB2 LINE L1 -3 6168 5796 1758 139 0 0 chr2 249066544 249066789 -4189794 + AluJb SINE Alu 50 294 -18 264 235 0 0 chr2 249067039 249067107 -4189476 + L1 LINE L1 4420 4487 -1659 1048 152 10 5 chr2 249067107 249067304 -4189279 - L1MB2 LINE L1 -559 5775 5578 743 246 54 9 chr2 249067278 249067502 -4189081 - L1MB2 LINE L1 -1216 4930 4697 * 1829 208 77 30 chr2 249067507 249068041 -4188542 - L1MB2 LINE L1 -2266 3880 3322 387 228 0 0 chr2 249068345 249068437 -4188146 + CT-rich Low_complexity Low_complexity 1 92 0 754 129 0 39 chr2 249068471 249068649 -4187934 + (TTCC)n Simple_repeat Simple_repeat 1 171 0 345 157 24 12 chr2 249068658 249068741 -4187842 + CT-rich Low_complexity Low_complexity 3 86 0 439 45 30 0 chr2 249068786 249068852 -4187731 + (TCTA)n Simple_repeat Simple_repeat 3 70 0 752 143 0 0 chr2 249074064 249074176 -4182407 + AluSp SINE Alu 14 125 -188 379 353 8 0 chr2 249078187 249078306 -4178277 + MIR3 SINE MIR 43 162 -46 714 309 122 27 chr2 249078451 249078862 -4177721 - L2 LINE L2 -8 3305 2856 240 304 116 49 chr2 249078964 249079352 -4177231 - L2 LINE L2 -1838 1476 1063 187 282 14 56 chr2 249079679 249079750 -4176833 - MIR SINE MIR -5 257 190 304 222 43 77 chr2 249080129 249080246 -4176337 + L1MC4 LINE L1 6602 6714 -1328 2009 147 38 0 chr2 249080666 249080786 -4175797 + AluSx SINE Alu 1 115 -197 207 0 0 0 chr2 249080786 249080809 -4175774 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 2009 147 38 0 chr2 249080809 249080981 -4175602 + AluSx SINE Alu 115 304 -8 229 228 0 18 chr2 249080993 249081050 -4175533 - L3 LINE CR1 -177 1400 1345 188 291 163 23 chr2 249081056 249081142 -4175441 - L3 LINE CR1 -78 1499 1402 2144 133 0 0 chr2 249081418 249081718 -4174865 - AluSx SINE Alu -12 300 1 22 0 0 0 chr2 249083798 249083820 -4172763 + AT_rich Low_complexity Low_complexity 1 22 0 1821 168 48 123 chr2 249086978 249087041 -4169542 - MLT1D LTR MaLR 0 505 439 2296 85 0 0 chr2 249087041 249087322 -4169261 + AluSq SINE Alu 1 281 -32 1821 168 48 123 chr2 249087322 249087801 -4168782 - MLT1D LTR MaLR -66 439 4 225 220 0 17 chr2 249089452 249089511 -4167072 + MER103 DNA DNA 4 61 -105 492 266 261 43 chr2 249089707 249090424 -4166159 + L2 LINE L2 1280 2152 -1162 23 0 0 0 chr2 249091229 249091252 -4165331 + AT_rich Low_complexity Low_complexity 1 23 0 281 73 0 0 chr2 249091276 249091317 -4165266 - Alu SINE Alu -10 292 252 1406 141 0 5 chr2 249091418 249091631 -4164952 - AluJb SINE Alu -99 213 2 2062 233 55 4 chr2 249091647 249092188 -4164395 - MER90 LTR ERV1 -6 569 1 2451 84 0 0 chr2 249092410 249092706 -4163877 + AluSg SINE Alu 1 296 -14 24 32 0 0 chr2 249092715 249092746 -4163837 + AT_rich Low_complexity Low_complexity 1 31 0 1667 147 15 87 chr2 249092785 249093119 -4163464 + AluJb SINE Alu 1 310 -2 221 321 52 52 chr2 249093312 249093446 -4163137 + MIR3 SINE MIR 74 207 -1 205 318 0 0 chr2 249094630 249094693 -4161890 - MIR3 SINE MIR -1 207 145 215 255 0 20 chr2 249097550 249097601 -4158982 + (TATG)n Simple_repeat Simple_repeat 1 50 0 2106 141 29 5 chr2 249097623 249097998 -4158585 - MLT1B LTR MaLR -6 384 1 647 211 5 0 chr2 249098002 249098223 -4158360 + (CA)n Simple_repeat Simple_repeat 1 222 0 328 279 9 36 chr2 249098366 249098477 -4158106 + MIR3 SINE MIR 85 192 -16 297 307 196 0 chr2 249104006 249104169 -4152414 + L2 LINE L2 3028 3222 -50 667 82 0 0 chr2 249104848 249104933 -4151650 - AluY SINE Alu -15 296 212 223 294 98 69 chr2 249104933 249105035 -4151548 + L2 LINE L2 3168 3272 0 2153 142 3 0 chr2 249106266 249106577 -4150006 + AluJo SINE Alu 1 312 0 309 125 14 28 chr2 249106886 249106958 -4149625 + (CCAA)n Simple_repeat Simple_repeat 1 71 0 230 270 81 27 chr2 249107156 249107267 -4149316 + HAL1 LINE L1 795 911 -1596 273 317 136 23 chr2 249107294 249107603 -4148980 + LTR16B LTR ERVL 1 344 -120 501 292 40 36 chr2 249108132 249108406 -4148177 + ERVL LTR ERVL 3441 3715 -2049 389 281 55 7 chr2 249108706 249108852 -4147731 + HAL1 LINE L1 1095 1247 -1260 607 269 43 55 chr2 249109547 249109803 -4146780 + HAL1 LINE L1 1499 1751 -756 24 0 0 0 chr2 249110207 249110231 -4146352 + AT_rich Low_complexity Low_complexity 1 24 0 969 210 0 0 chr2 249110392 249110568 -4146015 - AluJb SINE Alu 0 312 137 349 205 12 0 chr2 249110570 249110653 -4145930 - HAL1 LINE L1 -1164 1343 1260 280 242 86 78 chr2 249110666 249110767 -4145816 - HAL1 LINE L1 -1296 1211 1112 2241 113 0 7 chr2 249110767 249111076 -4145507 - AluSx SINE Alu -5 307 1 280 242 86 78 chr2 249111076 249111243 -4145340 - HAL1 LINE L1 -1395 1112 941 392 311 95 33 chr2 249111373 249111679 -4144904 - HAL1 LINE L1 -1744 763 439 1141 218 113 60 chr2 249112644 249112970 -4143613 - MLT1C LTR MaLR -4 463 107 2205 108 3 3 chr2 249112970 249113266 -4143317 - AluSx SINE Alu -16 296 1 1141 218 113 60 chr2 249113266 249113374 -4143209 - MLT1C LTR MaLR -360 107 6 351 299 37 83 chr2 249115013 249115254 -4141329 + L2 LINE L2 2842 3071 -201 452 325 73 5 chr2 249115638 249115829 -4140754 - MIR SINE MIR -22 240 37 405 239 138 67 chr2 249115835 249116211 -4140372 - LTR16A1 LTR ERVL 0 457 55 264 287 107 16 chr2 249116529 249116651 -4139932 + L2 LINE L2 3140 3272 0 205 320 0 0 chr2 249117485 249117535 -4139048 - L2 LINE L2 -282 2990 2941 198 167 0 0 chr2 249117807 249117843 -4138740 + (CATTT)n Simple_repeat Simple_repeat 2 37 0 3316 195 38 30 chr2 249117847 249118839 -4137744 - L1MB7 LINE L1 -174 6010 5004 1762 178 27 7 chr2 249118839 249119137 -4137446 - AluJb SINE Alu -8 304 1 3316 195 38 30 chr2 249119137 249119531 -4137052 - L1MB7 LINE L1 -1180 5004 4615 1530 223 41 39 chr2 249119789 249120175 -4136408 + L1ME2 LINE L1 5680 6069 -95 2452 100 0 0 chr2 249120175 249120485 -4136098 - AluSg SINE Alu 0 310 1 1530 223 41 39 chr2 249120485 249120533 -4136050 + L1ME2 LINE L1 6069 6115 -49 295 236 45 0 chr2 249120537 249120626 -4135957 + L1ME2 LINE L1 6071 6163 -1 1850 175 63 41 chr2 249121081 249121522 -4135061 - LTR8A LTR ERV1 0 727 277 * 2411 147 26 9 chr2 249121515 249121936 -4134647 + MER44D DNA MER2_type 115 597 -8 508 290 51 31 chr2 249121943 249122198 -4134385 - LTR33A LTR ERVL -44 479 220 619 88 59 0 chr2 249122261 249122470 -4134113 + (CA)n Simple_repeat Simple_repeat 1 221 0 534 332 79 12 chr2 249123406 249123647 -4132936 - MIR SINE MIR 0 262 6 262 207 0 17 chr2 249124124 249124182 -4132401 - L1M2 LINE L1 -717 5580 5524 415 269 34 47 chr2 249124270 249124419 -4132164 + MLT1I LTR MaLR 71 217 -192 807 280 111 92 chr2 249124501 249125033 -4131550 + MLT1H1 LTR MaLR 1 549 0 510 70 0 0 chr2 249125899 249125970 -4130613 + (TCCA)n Simple_repeat Simple_repeat 1 71 0 259 342 9 35 chr2 249126138 249126252 -4130331 - MIR SINE MIR -1 261 151 836 277 141 6 chr2 249127742 249128089 -4128494 - LTR16C LTR ERVL 0 491 98 234 336 93 14 chr2 249128174 249128314 -4128269 + MIR3 SINE MIR 2 152 -56 1585 141 8 8 chr2 249128323 249128564 -4128019 - LTR39 LTR ERV1 0 783 543 2671 70 5 24 chr2 249128564 249128935 -4127648 + THE1B LTR MaLR 1 364 0 * 2747 146 85 14 chr2 249128935 249129449 -4127134 - LTR39 LTR ERV1 -232 551 1 484 298 81 12 chr2 249129570 249129818 -4126765 + MLT1K LTR MaLR 122 386 -202 420 123 0 0 chr2 249129847 249129920 -4126663 + (GA)n Simple_repeat Simple_repeat 2 74 0 196 250 28 83 chr2 249131106 249131178 -4125405 + L2 LINE L2 3227 3294 -19 323 258 31 31 chr2 249131425 249131522 -4125061 + L3b LINE CR1 1281 1377 -206 1093 268 85 5 chr2 249132051 249132451 -4124132 + L1M4 LINE L1 4850 5281 -865 261 254 42 0 chr2 249132516 249132587 -4123996 + MER3 DNA MER1_type 14 87 -122 305 302 124 45 chr2 249133384 249133675 -4122908 + L2 LINE L2 2998 3311 -2 221 214 18 36 chr2 249135324 249135380 -4121203 + L2 LINE L2 3210 3264 -49 191 339 51 51 chr2 249135478 249135596 -4120987 + MIR SINE MIR 31 148 -114 181 71 36 0 chr2 249135751 249135779 -4120804 + L2 LINE L2 1677 1705 -1609 1694 190 38 6 chr2 249136357 249136699 -4119884 + MLT1A1 LTR MaLR 1 353 -12 246 235 222 0 chr2 249136950 249137031 -4119552 + LTR16B LTR ERVL 193 291 -173 27 0 0 0 chr2 249139493 249139520 -4117063 + AT_rich Low_complexity Low_complexity 1 27 0 2640 113 128 60 chr2 249141172 249141599 -4114984 - MER4A LTR ERV1 -77 587 113 2262 88 10 26 chr2 249141599 249141904 -4114679 + AluSp SINE Alu 1 300 -13 2640 113 128 60 chr2 249141904 249142024 -4114559 - MER4A LTR ERV1 -551 113 3 2296 200 39 2 chr2 249142635 249143120 -4113463 - L1MB5 LINE L1 -8 6166 5664 336 323 73 30 chr2 249147625 249147789 -4108794 + MIR SINE MIR 25 195 -67 782 201 7 0 chr2 249148650 249148789 -4107794 - AluSg/x SINE Alu -38 274 135 185 279 25 51 chr2 249149115 249149194 -4107389 + L3 LINE CR1 1498 1574 -3 320 318 26 19 chr2 249149849 249150003 -4106580 + L3b LINE CR1 1115 1269 -314 450 0 0 0 chr2 249152229 249152279 -4104304 + (T)n Simple_repeat Simple_repeat 1 50 0 21 0 0 0 chr2 249152279 249152300 -4104283 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 249152404 249152426 -4104157 + GC_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr2 249152436 249152460 -4104123 + (T)n Simple_repeat Simple_repeat 1 24 0 2312 82 0 70 chr2 249152727 249153058 -4103525 - AluSg SINE Alu 0 310 3 445 266 55 50 chr2 249153122 249153321 -4103262 + MIR3 SINE MIR 3 202 -6 184 214 0 143 chr2 249153583 249153653 -4102930 - L2 LINE L2 0 3313 3254 317 307 47 8 chr2 249153760 249153887 -4102696 - MIR SINE MIR -17 245 114 671 76 0 0 chr2 249154703 249154795 -4101788 - AluSp/q SINE Alu -3 310 219 361 299 25 25 chr2 249205371 249205528 -4051055 - L1ME LINE L1 -5639 431 275 347 335 32 7 chr2 249205603 249205758 -4050825 - L1ME LINE L1 -5901 169 11 207 0 0 0 chr2 249206608 249206631 -4049952 + (A)n Simple_repeat Simple_repeat 1 23 0 851 185 6 0 chr2 249206652 249206809 -4049774 - AluSg/x SINE Alu -7 303 146 603 252 122 4 chr2 249207265 249207495 -4049088 - L2 LINE L2 -882 2432 2176 281 268 152 0 chr2 249207562 249207674 -4048909 - L2 LINE L2 -1357 1957 1829 636 208 28 14 chr2 249207674 249207818 -4048765 + L1M3 LINE L1 5582 5727 -444 291 93 74 0 chr2 249207794 249207848 -4048735 + L1 LINE L1 4323 4380 -1766 * 805 194 17 46 chr2 249207851 249207992 -4048591 + FRAM SINE Alu 1 138 -174 2132 131 144 5 chr2 249207992 249208366 -4048217 + MSTA LTR MaLR 3 428 0 805 194 17 46 chr2 249208366 249208399 -4048184 + FRAM SINE Alu 138 170 -6 5658 150 9 19 chr2 249208399 249209701 -4046882 + L1MA8 LINE L1 4379 5669 -622 2345 85 3 0 chr2 249209701 249209996 -4046587 - AluSx SINE Alu -16 296 1 5658 150 9 19 chr2 249209996 249210246 -4046337 + L1MA8 LINE L1 5669 5920 -371 2272 116 3 0 chr2 249210246 249210556 -4046027 - AluSx SINE Alu -1 311 1 472 263 73 53 chr2 249212506 249212693 -4043890 + HAL1b LINE L1 191 390 -958 180 0 0 0 chr2 249212693 249212713 -4043870 + (CAA)n Simple_repeat Simple_repeat 2 21 0 472 263 73 53 chr2 249212713 249212867 -4043716 + HAL1b LINE L1 390 539 -809 237 212 30 15 chr2 249212935 249213001 -4043582 + HAL1b LINE L1 551 617 -731 313 263 68 38 chr2 249213031 249213164 -4043419 + MER5B DNA MER1_type 28 164 -14 540 285 69 61 chr2 249213234 249213708 -4042875 + L1MC4a LINE L1 4234 4716 -1430 2299 121 13 46 chr2 249213708 249214096 -4042487 - THE1C LTR MaLR 0 375 1 540 285 69 61 chr2 249214096 249214277 -4042306 + L1MC4a LINE L1 4716 4894 -1252 21 0 0 0 chr2 249214281 249214302 -4042281 + AT_rich Low_complexity Low_complexity 1 21 0 1850 150 0 14 chr2 249214303 249214596 -4041987 - AluJo SINE Alu -22 290 2 326 128 43 0 chr2 249214763 249214857 -4041726 + (TA)n Simple_repeat Simple_repeat 1 98 0 1734 153 14 0 chr2 249214857 249215132 -4041451 - AluJo SINE Alu -25 287 9 322 256 99 88 chr2 249215335 249215608 -4040975 + L1MC4a LINE L1 5268 5543 -2265 457 298 103 48 chr2 249215651 249216067 -4040516 + L1MC4a LINE L1 5502 5940 -1868 1750 201 61 19 chr2 249217157 249217586 -4038997 - MLT1C LTR MaLR -1 466 20 2034 188 84 11 chr2 249217937 249218390 -4038193 + MER66B LTR ERV1 1 486 0 1807 165 34 39 chr2 249218473 249218831 -4037752 + MLT1A1 LTR MaLR 1 356 -9 207 304 52 30 chr2 249219254 249219389 -4037194 - L2 LINE L2 -1324 1990 1853 281 244 137 46 chr2 249219933 249220064 -4036519 - L1ME LINE L1 -388 5733 5591 448 325 150 0 chr2 249221213 249221413 -4035170 + MIR SINE MIR 15 244 -18 326 109 31 0 chr2 249221920 249221984 -4034599 + CT-rich Low_complexity Low_complexity 4 69 0 756 130 5 43 chr2 249221985 249222170 -4034413 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 243 105 0 0 chr2 249222178 249222216 -4034367 - ALR/Alpha Satellite centromeric -59 113 76 4549 74 0 42 chr2 249222216 249222889 -4033694 - L1PA8 LINE L1 -4 6168 5524 282 233 12 35 chr2 249223519 249223605 -4032978 + MER31A LTR ERV1 364 447 -38 260 185 92 0 chr2 249223811 249223876 -4032707 + L2 LINE L2 3002 3072 -200 688 307 119 15 chr2 249224009 249224553 -4032030 - L1ME4a LINE L1 -15 6106 5506 309 333 93 0 chr2 249225700 249225850 -4030733 + MIR SINE MIR 79 242 -20 221 369 59 11 chr2 249225902 249226089 -4030494 + MIR SINE MIR 44 239 -23 222 261 0 0 chr2 249226773 249226834 -4029749 + (CGTG)n Simple_repeat Simple_repeat 1 61 0 386 188 30 90 chr2 249228874 249229007 -4027576 - MIR SINE MIR -38 224 100 370 310 103 0 chr2 249229065 249229220 -4027363 - L2 LINE L2 -940 2374 2204 495 245 42 7 chr2 249229663 249229806 -4026777 + Charlie4 DNA MER1_type 105 252 -1709 398 164 0 0 chr2 249229969 249230042 -4026541 + LTR50 LTR ERVL 211 283 -512 267 222 16 0 chr2 249230256 249230319 -4026264 + LTR50 LTR ERVL 732 795 0 579 222 30 0 chr2 249230339 249230474 -4026109 + Charlie4 DNA MER1_type 1808 1946 -15 348 344 57 40 chr2 249230623 249230870 -4025713 - L1ME4a LINE L1 -1 6120 5870 1035 142 43 98 chr2 249230932 249231186 -4025397 - L1MB3 LINE L1 -4 6179 5940 2120 127 10 16 chr2 249231457 249231771 -4024812 - AluSx SINE Alu 0 312 1 2265 171 22 0 chr2 249231989 249232433 -4024150 - L1MB3 LINE L1 -2 6181 5728 701 185 0 30 chr2 249232478 249232613 -4023970 + FLAM_C SINE Alu 1 131 -2 1269 209 90 3 chr2 249233408 249233743 -4022840 + MLT1A1 LTR MaLR 2 365 0 230 260 52 31 chr2 249234639 249234735 -4021848 - L2 LINE L2 -4 3268 3171 229 261 0 15 chr2 249234945 249235010 -4021573 + L1ME4a LINE L1 5975 6038 -83 269 196 34 81 chr2 249235842 249235990 -4020593 + C-rich Low_complexity Low_complexity 6 146 0 36 40 0 0 chr2 249236001 249236051 -4020532 + GC_rich Low_complexity Low_complexity 1 50 0 32 0 0 0 chr2 249236214 249236246 -4020337 + GC_rich Low_complexity Low_complexity 1 32 0 270 282 13 0 chr2 249237577 249237655 -4018928 + L2 LINE L2 3194 3272 0 2407 103 7 0 chr2 249237915 249238225 -4018358 - AluSx SINE Alu 0 312 1 314 232 108 76 chr2 249238329 249238514 -4018069 + MIR SINE MIR 17 207 -55 185 174 87 22 chr2 249239026 249239072 -4017511 - L2 LINE L2 -219 3053 3005 396 259 70 30 chr2 249240700 249240901 -4015682 + LTR16A1 LTR ERVL 160 368 -89 189 355 149 0 chr2 249242093 249242234 -4014349 - MIR SINE MIR -32 230 69 587 269 60 0 chr2 249242491 249242658 -4013925 + L2 LINE L2 2642 2818 -496 866 257 28 16 chr2 249242858 249243107 -4013476 + MIR SINE MIR 10 261 -1 1512 246 48 67 chr2 249243121 249243702 -4012881 - HAL1 LINE L1 -374 2133 1564 293 286 45 0 chr2 249243702 249243814 -4012769 + L1MC4a LINE L1 5815 5931 -1877 1070 223 124 25 chr2 249243994 249244268 -4012315 + AluJo SINE Alu 2 302 0 1939 162 7 13 chr2 249244274 249244582 -4012001 + AluSx SINE Alu 5 310 -2 1129 246 151 31 chr2 249244583 249245159 -4011424 - HAL1 LINE L1 -1054 1453 809 182 261 29 43 chr2 249245269 249245338 -4011245 - MIR SINE MIR -188 74 7 2237 142 0 0 chr2 249245639 249245948 -4010635 + AluSx SINE Alu 1 309 -3 3751 107 0 8 chr2 249246438 249246969 -4009614 - MER1A DNA MER1_type 0 527 1 557 316 6 0 chr2 249247043 249247214 -4009369 + MER3 DNA MER1_type 38 209 0 992 202 18 18 chr2 249248214 249248432 -4008151 - MER20 DNA MER1_type -1 218 1 511 162 30 0 chr2 249248766 249248865 -4007718 - MLT1A2 LTR MaLR -21 353 252 719 120 0 0 chr2 249249575 249249683 -4006900 + FLAM_C SINE Alu 29 136 -7 2075 126 52 0 chr2 249249683 249249969 -4006614 + AluSx SINE Alu 1 301 -11 21 36 0 0 chr2 249250187 249250215 -4006368 + AT_rich Low_complexity Low_complexity 1 28 0 439 245 58 136 chr2 249250753 249251284 -4005299 + L1M3e LINE L1 1147 1636 -5394 439 238 40 8 chr2 249251711 249251837 -4004746 + MER5A DNA MER1_type 42 171 -18 330 138 0 0 chr2 249252162 249252220 -4004363 + (TGAA)n Simple_repeat Simple_repeat 1 58 0 1592 217 79 0 chr2 249253121 249253499 -4003084 - L1MD3 LINE L1 -192 7803 7396 465 211 9 9 chr2 249253499 249253608 -4002975 - MLT1F1 LTR MaLR -457 110 2 292 192 41 27 chr2 249253609 249253682 -4002901 - L1MD3 LINE L1 -717 7278 7205 418 194 41 0 chr2 249254556 249254654 -4001929 + Charlie7 DNA MER1_type 1981 2082 -530 22 0 0 0 chr2 249254669 249254691 -4001892 + AT_rich Low_complexity Low_complexity 1 22 0 1361 83 16 0 chr2 249254699 249254951 -4001632 - L1PA11 LINE L1 -2 6172 5864 1415 188 46 55 chr2 249254979 249255346 -4001237 + MLT1A2 LTR MaLR 11 374 0 270 159 0 0 chr2 249255792 249255836 -4000747 - MLT1I LTR MaLR -221 188 145 788 148 0 15 chr2 249256898 249257033 -3999550 + FLAM_C SINE Alu 1 133 0 2181 112 7 7 chr2 249257701 249257996 -3998587 + AluSq SINE Alu 1 295 -18 529 327 68 23 chr2 249258397 249258944 -3997639 - L2 LINE L2 0 3313 2678 213 317 49 0 chr2 249258944 249259026 -3997557 - MER91C DNA MER1_type -1 139 54 591 258 38 33 chr2 249259071 249259284 -3997299 - L2 LINE L2 -655 2659 2446 718 275 111 52 chr2 249259557 249260117 -3996466 - L1MC5 LINE L1 -37 7924 7332 898 185 57 9 chr2 249260119 249260346 -3996237 - Charlie5 DNA MER1_type 0 2624 2387 2200 126 0 7 chr2 249260760 249261061 -3995522 - AluSx SINE Alu -13 299 1 549 168 19 19 chr2 249261155 249261262 -3995321 - MIR SINE MIR -64 198 92 2356 89 3 0 chr2 249261870 249262161 -3994422 - AluSq SINE Alu -21 292 1 494 225 0 0 chr2 249262367 249262456 -3994127 - MER2 DNA MER2_type 0 345 257 722 179 0 8 chr2 249262464 249262598 -3993985 + AluJo SINE Alu 2 134 -178 1631 117 14 32 chr2 249262602 249262884 -3993699 - MER2 DNA MER2_type -68 277 1 1948 152 3 13 chr2 249262959 249263268 -3993315 + AluJb SINE Alu 7 312 0 2242 123 0 0 chr2 249263620 249263920 -3992663 - AluSx SINE Alu -12 300 1 2544 11 0 0 chr2 249263929 249264200 -3992383 - AluYa5 SINE Alu -8 303 33 217 337 116 0 chr2 249264605 249264691 -3991892 - MIR SINE MIR -116 146 51 212 276 179 7 chr2 249264835 249264980 -3991603 + L2 LINE L2 727 896 -2418 772 197 21 9 chr2 249265196 249265373 -3991210 + MER20 DNA MER1_type 21 194 -25 2093 128 7 14 chr2 249266443 249266739 -3989844 + AluSx SINE Alu 1 294 -18 1527 179 0 47 chr2 249267058 249267354 -3989229 + AluJb SINE Alu 1 282 -30 207 342 118 40 chr2 249268214 249268536 -3988047 + L2 LINE L2 1990 2336 -978 192 152 0 0 chr2 249268734 249268767 -3987816 + (TCCA)n Simple_repeat Simple_repeat 3 35 0 255 259 62 25 chr2 249269380 249269461 -3987122 + MIR SINE MIR 42 125 -83 2415 96 3 0 chr2 249269576 249269878 -3986705 + AluSx SINE Alu 1 303 -9 2235 133 0 9 chr2 249270697 249271012 -3985571 - AluSx SINE Alu 0 312 1 446 128 26 0 chr2 249271391 249271469 -3985114 + MADE1 DNA Mariner 1 80 0 433 316 87 19 chr2 249272126 249272332 -3984251 - MIR SINE MIR -42 220 1 2442 90 0 0 chr2 249272708 249273019 -3983564 + AluSx SINE Alu 1 311 -1 412 247 14 41 chr2 249274080 249274375 -3982208 + (CGGGG)n Simple_repeat Simple_repeat 1 287 0 22 70 0 0 chr2 249274620 249274663 -3981920 + GC_rich Low_complexity Low_complexity 1 43 0 1001 222 66 54 chr2 249276244 249276578 -3980005 + MER46C DNA MER2_type 1 338 0 508 286 79 56 chr2 249278748 249279000 -3977583 - MIR SINE MIR -3 259 2 210 233 0 0 chr2 249279038 249279081 -3977502 + (CTG)n Simple_repeat Simple_repeat 1 43 0 2071 130 13 7 chr2 249279274 249279575 -3977008 - AluSq SINE Alu -10 303 1 352 297 73 48 chr2 249280487 249280652 -3975931 - MIR3 SINE MIR -4 204 36 1237 269 126 28 chr2 249281090 249281594 -3974989 - MER20B DNA MER1_type -2 781 191 2593 77 3 0 chr2 249281594 249281904 -3974679 - AluSx SINE Alu -1 311 1 1237 269 126 28 chr2 249281904 249282083 -3974500 - MER20B DNA MER1_type -592 191 31 238 291 64 71 chr2 249285573 249285714 -3970869 + L2 LINE L2 2613 2752 -562 2380 102 0 3 chr2 249286401 249286706 -3969877 - AluSx SINE Alu -8 304 1 1967 186 108 51 chr2 249287533 249287632 -3968951 - MLT1E1 LTR MaLR -7 647 555 1984 144 0 7 chr2 249287632 249287930 -3968653 + AluJb SINE Alu 1 296 -16 1967 186 108 51 chr2 249287930 249288442 -3968141 - MLT1E1 LTR MaLR -99 555 1 253 224 119 0 chr2 249288446 249288513 -3968070 - MLT1E1 LTR MaLR -579 75 1 225 307 0 40 chr2 249288560 249288661 -3967922 + CT-rich Low_complexity Low_complexity 1 97 0 2002 149 0 3 chr2 249288886 249289181 -3967402 - AluJb SINE Alu -18 294 1 1021 180 0 32 chr2 249289539 249289728 -3966855 + FAM SINE Alu 1 47 -2 239 355 48 8 chr2 249290073 249290197 -3966386 + L3 LINE CR1 1341 1469 -108 315 317 42 21 chr2 249290237 249290379 -3966204 + MIR3 SINE MIR 49 193 -15 909 240 0 29 chr2 249290419 249290627 -3965956 + MIR SINE MIR 60 261 -1 247 246 0 0 chr2 249291774 249291831 -3964752 + Charlie8 DNA MER1_type 85 141 -2276 2195 118 0 26 chr2 249292108 249292413 -3964170 - AluSx SINE Alu -15 297 1 2160 119 3 10 chr2 249292536 249292838 -3963745 - AluSx SINE Alu -12 300 1 924 215 0 11 chr2 249293167 249293344 -3963239 + FAM SINE Alu 1 175 0 227 358 67 22 chr2 249294400 249294534 -3962049 - MIR3 SINE MIR -66 142 3 240 163 0 0 chr2 249294879 249294922 -3961661 + (TG)n Simple_repeat Simple_repeat 1 43 0 234 0 0 0 chr2 249295878 249295904 -3960679 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 1369 87 116 5 chr2 249299168 249299375 -3957208 - MER30 DNA MER1_type 0 230 1 307 361 71 12 chr2 249300571 249300740 -3955843 + L2 LINE L2 235 413 -2901 530 150 56 45 chr2 249301226 249301369 -3955214 - MER104 DNA Tc2 -35 145 1 2257 124 3 0 chr2 249302193 249302499 -3954084 - AluSx SINE Alu -5 307 1 2026 134 7 7 chr2 249302509 249302800 -3953783 - AluSx SINE Alu -21 291 1 364 276 208 21 chr2 249304303 249304495 -3952088 - L2 LINE L2 -1272 2042 1815 265 243 48 48 chr2 249304934 249305037 -3951546 - MIR3 SINE MIR -21 187 85 293 286 71 0 chr2 249306092 249306176 -3950407 - L2 LINE L2 -25 3247 3158 431 276 24 40 chr2 249308755 249308936 -3947647 - MIR SINE MIR -39 223 48 2587 66 0 0 chr2 249309328 249309630 -3946953 + AluSg SINE Alu 1 302 -8 2108 120 0 13 chr2 249311180 249311479 -3945104 - AluSx SINE Alu -17 295 1 2094 121 0 4 chr2 249312888 249313210 -3943373 + AluY SINE Alu 1 321 0 25 0 0 0 chr2 249314220 249314245 -3942338 + AT_rich Low_complexity Low_complexity 1 25 0 30 59 0 0 chr2 249314293 249314344 -3942239 + AT_rich Low_complexity Low_complexity 1 51 0 2303 114 3 0 chr2 249316526 249316832 -3939751 - AluSx SINE Alu -5 307 1 23 78 0 0 chr2 249317073 249317124 -3939459 + AT_rich Low_complexity Low_complexity 1 51 0 207 351 27 14 chr2 249319587 249319661 -3936922 - MIR SINE MIR -153 109 35 201 200 182 0 chr2 249320251 249320306 -3936277 - L2 LINE L2 0 3313 3249 1661 165 6 32 chr2 249322376 249322691 -3933892 + AluJo SINE Alu 1 307 -5 2265 107 0 0 chr2 249323799 249324109 -3932474 + AluSx SINE Alu 2 311 -1 257 255 147 10 chr2 249325850 249325952 -3930631 - L2 LINE L2 -1 3312 3197 1984 131 0 0 chr2 249328291 249328611 -3927972 - AluSx SINE Alu 0 320 1 451 224 19 0 chr2 249329424 249329531 -3927052 - L1MEc LINE L1 -4230 2166 2058 183 42 0 0 chr2 249330166 249330190 -3926393 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 180 0 0 0 chr2 249330518 249330538 -3926045 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 2132 157 22 8 chr2 249331056 249331426 -3925157 - THE1C LTR MaLR 0 375 1 271 237 0 0 chr2 249332080 249332139 -3924444 + L2 LINE L2 3223 3281 -32 333 297 212 19 chr2 249332210 249332479 -3924104 + L3 LINE CR1 1255 1575 -2 2293 86 3 3 chr2 249332538 249332888 -3923695 - AluSq SINE Alu 0 350 1 189 292 62 15 chr2 249332967 249333032 -3923551 - L2 LINE L2 -1 3271 3204 2232 88 3 0 chr2 249334377 249334671 -3921912 + AluSx SINE Alu 1 295 -17 1748 159 20 3 chr2 249335766 249336062 -3920521 + AluJb SINE Alu 1 301 -11 346 137 14 14 chr2 249336075 249336148 -3920435 + (TATG)n Simple_repeat Simple_repeat 2 74 0 2095 129 0 0 chr2 249337904 249338213 -3918370 + AluSx SINE Alu 1 309 -3 1529 194 67 30 chr2 249338505 249338866 -3917717 - MLT1A2 LTR MaLR 0 374 1 1909 184 152 7 chr2 249338995 249339436 -3917147 + MLT1D LTR MaLR 1 505 0 24 0 0 0 chr2 249339931 249339955 -3916628 + AT_rich Low_complexity Low_complexity 1 24 0 198 0 0 0 chr2 249340476 249340498 -3916085 + (TG)n Simple_repeat Simple_repeat 2 23 0 635 202 8 0 chr2 249343496 249343615 -3912968 + FLAM_C SINE Alu 1 120 -13 372 199 70 51 chr2 249343799 249343955 -3912628 - Charlie7 DNA MER1_type -1 2611 2453 226 181 325 12 chr2 249343948 249344031 -3912552 - Charlie7 DNA MER1_type -2503 109 1 * 204 163 0 0 chr2 249345662 249345705 -3910878 + GA-rich Low_complexity Low_complexity 3 45 0 2212 97 0 3 chr2 249347232 249347532 -3909051 + AluSq SINE Alu 1 299 -14 905 136 13 7 chr2 249347558 249347713 -3908870 + FRAM SINE Alu 17 172 -4 33 66 0 0 chr2 249347941 249348002 -3908581 + AT_rich Low_complexity Low_complexity 1 61 0 415 273 93 0 chr2 249348269 249348441 -3908142 + MER105 DNA DNA 13 200 -4 1675 140 32 48 chr2 249349141 249349456 -3907127 + AluJb SINE Alu 1 310 -2 338 311 50 19 chr2 249351259 249351420 -3905163 + MIR SINE MIR 87 252 -10 25 51 0 0 chr2 249352521 249352560 -3904023 + AT_rich Low_complexity Low_complexity 1 39 0 2239 85 3 0 chr2 249352764 249353058 -3903525 + AluSx SINE Alu 1 295 -17 1022 182 65 88 chr2 249353489 249353841 -3902742 - MER2 DNA MER2_type 0 344 1 2243 94 10 0 chr2 249355508 249355815 -3900768 + AluSq SINE Alu 1 310 -3 638 302 98 25 chr2 249357254 249357802 -3898781 - L2 LINE L2 -2 3270 2675 1743 153 0 23 chr2 249357802 249358110 -3898473 + AluJb SINE Alu 1 301 -11 638 302 98 25 chr2 249358110 249358172 -3898411 - L2 LINE L2 -597 2675 2619 1926 101 29 0 chr2 249358181 249358512 -3898071 - AluSq SINE Alu 0 339 1 669 292 118 26 chr2 249358521 249359136 -3897447 - L1MEd LINE L1 -3329 2800 2138 23 33 0 0 chr2 249359273 249359303 -3897280 + AT_rich Low_complexity Low_complexity 1 30 0 210 328 0 0 chr2 249359390 249359448 -3897135 + (CATATA)n Simple_repeat Simple_repeat 1 58 0 646 269 173 57 chr2 249359590 249360504 -3896079 - L1MEd LINE L1 -4647 1663 597 2075 123 7 3 chr2 249360890 249361192 -3895391 + AluSx SINE Alu 3 305 -7 2051 93 31 0 chr2 249361194 249361484 -3895099 + AluY SINE Alu 1 299 -12 442 303 49 25 chr2 249363546 249363708 -3892875 - MIR SINE MIR -56 206 41 22 56 0 0 chr2 249363850 249363886 -3892697 + AT_rich Low_complexity Low_complexity 1 36 0 787 210 13 61 chr2 249363938 249364167 -3892416 - MER20 DNA MER1_type -1 218 1 2179 83 3 13 chr2 249365277 249365578 -3891005 + AluY SINE Alu 1 298 -13 1605 115 0 30 chr2 249365622 249365758 -3890825 - THE1B LTR MaLR 0 364 225 7724 25 0 2 chr2 249365758 249366938 -3889645 - L1PA4 LINE L1 -2 6153 4973 1605 115 0 30 chr2 249366938 249367120 -3889463 - THE1B LTR MaLR -139 225 1 252 0 0 0 chr2 249367201 249367229 -3889354 + (CCA)n Simple_repeat Simple_repeat 3 30 0 22 0 0 0 chr2 249367977 249367999 -3888584 + AT_rich Low_complexity Low_complexity 1 22 0 265 257 57 143 chr2 249368157 249368402 -3888181 - L2 LINE L2 -117 3196 2973 1107 175 72 7 chr2 249368402 249368694 -3887889 - Charlie5 DNA MER1_type 0 2624 2314 767 102 0 0 chr2 249368734 249368842 -3887741 - AluSc SINE Alu 0 309 202 3551 87 9 106 chr2 249368844 249369496 -3887087 + LTR14B LTR ERVK 20 608 0 1598 101 5 0 chr2 249369496 249369703 -3886880 - AluSc SINE Alu -101 208 1 6242 165 57 33 chr2 249369703 249370330 -3886253 - Charlie5 DNA MER1_type -397 2227 1616 1905 145 0 24 chr2 249370330 249370627 -3885956 - AluJo SINE Alu -22 290 1 6242 165 57 33 chr2 249370627 249371347 -3885236 - Charlie5 DNA MER1_type -1008 1616 841 1694 172 10 7 chr2 249371347 249371638 -3884945 + AluJb SINE Alu 2 293 -19 6242 165 57 33 chr2 249371638 249371740 -3884843 - Charlie5 DNA MER1_type -1783 841 743 1045 199 155 27 chr2 249371742 249372078 -3884505 - MLT1F1 LTR MaLR -10 557 179 242 259 0 0 chr2 249372078 249372136 -3884447 + GA-rich Low_complexity Low_complexity 1 58 0 338 226 12 12 chr2 249372197 249372281 -3884302 - MLT1F1 LTR MaLR -483 84 1 2295 187 40 26 chr2 249372282 249372860 -3883723 - Charlie5 DNA MER1_type -1868 744 159 257 307 11 11 chr2 249372862 249372950 -3883633 - L2 LINE L2 -940 2374 2287 1033 170 0 0 chr2 249373015 249373174 -3883409 + AluSg/x SINE Alu 139 297 -13 372 301 92 22 chr2 249373313 249373542 -3883041 - L2 LINE L2 -1034 2280 2036 222 295 16 0 chr2 249373959 249374020 -3882563 - MIR SINE MIR -74 188 127 811 128 182 0 chr2 249374020 249374168 -3882415 + AluJo SINE Alu 122 296 -16 274 280 97 0 chr2 249374251 249374344 -3882239 + L2 LINE L2 3147 3248 -24 2205 82 64 0 chr2 249375704 249375984 -3880599 + AluY SINE Alu 1 298 -13 2304 66 3 14 chr2 249376175 249376486 -3880097 - AluY SINE Alu 0 308 1 715 169 39 79 chr2 249376553 249376731 -3879852 - FRAM SINE Alu -8 168 1 181 296 0 0 chr2 249377108 249377152 -3879431 + L2 LINE L2 3224 3267 -5 2043 123 33 7 chr2 249377440 249377740 -3878843 + AluSx SINE Alu 1 308 -4 2559 43 0 3 chr2 249377829 249378131 -3878452 - AluY SINE Alu -10 301 1 2047 96 11 4 chr2 249378353 249378660 -3877923 + AluSx SINE Alu 1 309 0 219 278 44 67 chr2 249379001 249379091 -3877492 + L3 LINE CR1 1232 1319 -258 243 0 0 0 chr2 249379660 249379687 -3876896 + (TGAA)n Simple_repeat Simple_repeat 2 28 0 1050 150 204 54 chr2 249379939 249380023 -3876560 - MER96B DNA MER1_type? -55 362 292 189 0 0 0 chr2 249380023 249380044 -3876539 + (TTTAA)n Simple_repeat Simple_repeat 2 22 0 2093 101 0 24 chr2 249380044 249380341 -3876242 - AluSx SINE Alu -22 290 1 1050 150 204 54 chr2 249380341 249380568 -3876015 - MER96B DNA MER1_type? -124 293 3 936 67 0 93 chr2 249381708 249381858 -3874725 - AluY SINE Alu -175 136 1 278 303 59 53 chr2 249381917 249382069 -3874514 - L2 LINE L2 -484 2830 2678 1785 152 63 8 chr2 249382239 249382652 -3873931 - L1M4 LINE L1 -522 5652 5220 426 173 127 77 chr2 249382794 249382980 -3873603 + Charlie1 DNA MER1_type 2500 2700 -61 2193 103 28 0 chr2 249382980 249383271 -3873312 - AluSq SINE Alu -14 299 1 426 173 127 77 chr2 249383271 249383304 -3873279 + Charlie1 DNA MER1_type 2700 2730 -31 1280 198 54 29 chr2 249383306 249383584 -3872999 + AluJb SINE Alu 1 285 -27 1507 151 0 8 chr2 249383641 249383879 -3872704 - AluJb SINE Alu -76 236 1 191 280 11 97 chr2 249383948 249384041 -3872542 + L2 LINE L2 2926 3010 -262 287 298 53 21 chr2 249384346 249384440 -3872143 + L2 LINE L2 2977 3073 -199 1489 121 0 44 chr2 249384523 249384771 -3871812 + MER1B DNA MER1_type 103 339 0 194 232 36 36 chr2 249384810 249384866 -3871717 + MER5A DNA MER1_type 128 183 -6 674 233 52 0 chr2 249385065 249385237 -3871346 - L1ME LINE L1 -521 5641 5461 2044 117 0 0 chr2 249385237 249385511 -3871072 + AluSx SINE Alu 1 274 -38 249 187 0 0 chr2 249385555 249385630 -3870953 + (CA)n Simple_repeat Simple_repeat 2 76 0 535 108 24 9 chr2 249385630 249385737 -3870846 - L1ME LINE L1 -689 5475 5366 715 265 83 18 chr2 249385745 249386124 -3870459 - L1ME LINE L1 -860 5286 4903 2058 105 63 0 chr2 249386137 249386422 -3870161 - AluSx SINE Alu -9 303 1 3240 124 34 14 chr2 249386424 249387126 -3869457 - L1P4 LINE L1 -383 5783 5072 2913 201 16 1 chr2 249387120 249387787 -3868796 + L1 LINE L1 4012 4688 -1458 * 700 187 0 108 chr2 249387787 249387935 -3868648 + L1P LINE L1 4886 5006 -1140 1861 144 0 52 chr2 249387935 249388262 -3868321 + AluJo SINE Alu 1 310 -2 700 187 0 108 chr2 249388262 249388327 -3868256 + L1P LINE L1 5006 5076 -1070 502 255 96 30 chr2 249388331 249388696 -3867887 - L1ME LINE L1 -2697 3449 3061 658 297 26 23 chr2 249388720 249388986 -3867597 + L1MEc LINE L1 153 419 -5977 2110 119 3 3 chr2 249389416 249389701 -3866882 - AluSx SINE Alu -27 285 1 375 299 75 51 chr2 249390085 249390423 -3866160 + L1MEc LINE L1 647 1006 -5199 1919 133 12 49 chr2 249390423 249390747 -3865836 + AluJb SINE Alu 1 312 0 375 299 75 51 chr2 249390747 249390979 -3865604 + L1MEc LINE L1 1006 1231 -4974 245 278 165 43 chr2 249390996 249391398 -3865185 - L1ME LINE L1 -250 5871 5412 348 291 165 0 chr2 249391607 249391734 -3864849 + L2 LINE L2 1706 1853 -1461 839 255 23 14 chr2 249391758 249391974 -3864609 + L2 LINE L2 2035 2252 -1062 350 197 0 0 chr2 249391979 249392045 -3864538 - MER33 DNA MER1_type 0 324 259 987 149 6 19 chr2 249392046 249392207 -3864376 + FRAM SINE Alu 9 167 -9 920 148 133 0 chr2 249392276 249392486 -3864097 - MER33 DNA MER1_type -65 259 22 226 200 0 0 chr2 249392523 249392568 -3864015 + L2 LINE L2 2298 2342 -972 357 313 23 23 chr2 249392568 249392696 -3863887 + L2 LINE L2 2473 2600 -714 190 360 40 0 chr2 249392704 249392779 -3863804 + L2 LINE L2 2975 3052 -261 3119 161 70 12 chr2 249392779 249393364 -3863219 - LTR31 LTR ERV1 0 619 1 1702 182 14 3 chr2 249393525 249393822 -3862761 - AluJb SINE Alu -12 300 1 493 270 98 53 chr2 249394053 249394121 -3862462 - L1M4 LINE L1 -2842 3304 3241 1907 143 17 3 chr2 249394121 249394408 -3862175 - AluSx SINE Alu -21 291 1 493 270 98 53 chr2 249394408 249394695 -3861888 - L1M4 LINE L1 -2905 3241 2933 222 222 93 19 chr2 249394702 249394756 -3861827 - MIR SINE MIR -164 98 41 473 137 105 0 chr2 249395123 249395218 -3861365 + L1MA4 LINE L1 6190 6294 -6 921 255 58 21 chr2 249395267 249395593 -3860990 - L1MB8 LINE L1 -62 6116 5779 300 303 169 6 chr2 249396420 249396598 -3859985 + L1MEc LINE L1 2274 2480 -3735 440 324 94 62 chr2 249396721 249397319 -3859264 + L1M4 LINE L1 4591 5207 -939 403 169 108 24 chr2 249397320 249397403 -3859180 + FLAM_A SINE Alu 32 121 -21 307 231 0 83 chr2 249397412 249397520 -3859063 + L1M4 LINE L1 5191 5289 -857 215 207 18 183 chr2 249397526 249397690 -3858893 + L2 LINE L2 2271 2407 -907 525 220 99 72 chr2 249397779 249398002 -3858581 - MER112 DNA MER1_type -31 229 1 192 371 29 19 chr2 249398159 249398264 -3858319 + L2 LINE L2 2701 2806 -508 252 330 98 40 chr2 249398471 249398644 -3857939 + L2 LINE L2 3086 3268 -4 371 308 47 76 chr2 249398645 249398746 -3857837 + L3 LINE CR1 1367 1460 -117 1463 206 59 8 chr2 249398746 249399101 -3857482 - MLT1A2 LTR MaLR 0 374 2 371 308 47 76 chr2 249399101 249399210 -3857373 + L3 LINE CR1 1460 1571 -6 21 36 0 0 chr2 249400984 249401012 -3855571 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr2 249401120 249401150 -3855433 + AT_rich Low_complexity Low_complexity 1 30 0 186 213 43 21 chr2 249401296 249401343 -3855240 - MIR3 SINE MIR -13 195 148 1211 172 18 32 chr2 249403018 249403239 -3853344 + AluJo SINE Alu 1 218 -94 1335 120 39 0 chr2 249403746 249403979 -3852604 - L1MA4A LINE L1 -5 6298 6057 401 204 56 0 chr2 249404282 249404390 -3852193 + MER94 DNA DNA 1 114 -20 229 301 148 0 chr2 249405132 249405315 -3851268 + MER113 DNA MER1_type? 2 211 -310 209 132 26 0 chr2 249405352 249405390 -3851193 + (TA)n Simple_repeat Simple_repeat 2 40 0 263 318 180 43 chr2 249405454 249405665 -3850918 + MIR SINE MIR 23 262 0 26 0 0 0 chr2 249407298 249407324 -3849259 + AT_rich Low_complexity Low_complexity 1 26 0 1887 126 61 3 chr2 249407465 249407758 -3848825 - AluSx SINE Alu -2 310 1 433 287 67 38 chr2 249407781 249407990 -3848593 + L2 LINE L2 3098 3312 -1 615 266 128 5 chr2 249408200 249408388 -3848195 + MIR SINE MIR 44 254 -8 35 24 0 0 chr2 249408395 249408437 -3848146 + AT_rich Low_complexity Low_complexity 1 42 0 200 214 71 0 chr2 249408496 249408538 -3848045 - L2 LINE L2 -4 3309 3265 1188 127 118 5 chr2 249408947 249409168 -3847415 - MER2 DNA MER2_type -41 304 59 210 239 134 30 chr2 249409255 249409322 -3847261 - MIR3 SINE MIR -24 184 111 229 350 73 24 chr2 249409770 249409893 -3846690 - L2 LINE L2 -5 3267 3139 912 288 25 8 chr2 249410037 249410280 -3846303 + MIR SINE MIR 3 249 -13 329 331 78 7 chr2 249411015 249411169 -3845414 - L1M4 LINE L1 -1072 5074 4910 194 363 16 57 chr2 249412108 249412232 -3844351 + L2 LINE L2 3119 3237 -35 554 258 47 0 chr2 249412258 249412536 -3844047 - L1ME1 LINE L1 -21 6145 5809 785 198 55 51 chr2 249412540 249413230 -3843353 - L1ME1 LINE L1 -818 5328 4571 1931 146 0 7 chr2 249413509 249413835 -3842748 - AluSx SINE Alu 0 324 1 204 286 161 23 chr2 249413846 249414063 -3842520 + L2 LINE L2 1764 2010 -1304 2117 125 7 3 chr2 249414409 249414706 -3841877 - AluJo SINE Alu -14 298 1 669 293 42 9 chr2 249415046 249415261 -3841322 + MIR SINE MIR 41 262 0 561 267 45 11 chr2 249415343 249415519 -3841064 - L2 LINE L2 -1 3312 3131 998 146 57 10 chr2 249415811 249416003 -3840580 + MER105 DNA DNA 2 202 -2 32 26 0 0 chr2 249416137 249416176 -3840407 + AT_rich Low_complexity Low_complexity 1 39 0 33 66 0 0 chr2 249416750 249416811 -3839772 + AT_rich Low_complexity Low_complexity 1 61 0 1527 231 85 0 chr2 249416824 249417201 -3839382 - MLT1F LTR MaLR -3 539 131 * 4161 135 39 46 chr2 249417196 249418020 -3838563 + Tigger1 DNA MER2_type 41 858 -1560 725 86 8 55 chr2 249418030 249418158 -3838425 - L1PB1 LINE L1 -70 6081 5960 2445 125 25 0 chr2 249418158 249418551 -3838032 + Tigger1 DNA MER2_type 847 1249 -1169 1632 151 9 91 chr2 249418554 249418752 -3837831 - AluJo SINE Alu -8 304 142 2638 57 0 0 chr2 249418752 249419051 -3837532 + AluSc SINE Alu 1 299 -10 1632 151 9 91 chr2 249419051 249419183 -3837400 - AluJo SINE Alu -170 142 1 671 200 47 53 chr2 249419188 249419358 -3837225 - AluJo SINE Alu -78 234 67 4336 84 9 182 chr2 249419361 249419920 -3836663 + Tigger1 DNA MER2_type 1275 1747 -671 876 163 7 0 chr2 249419920 249420061 -3836522 - FLAM_C SINE Alu -1 142 1 4336 84 9 182 chr2 249420061 249420372 -3836211 + Tigger1 DNA MER2_type 1747 2110 -308 270 314 48 33 chr2 249420519 249420729 -3835854 + L1MEc LINE L1 1594 1806 -4590 2846 167 44 11 chr2 249420884 249421428 -3835155 - MER68 LTR ERV1 0 562 1 2315 84 17 3 chr2 249421525 249421821 -3834762 - AluSc SINE Alu -9 300 1 1187 226 41 0 chr2 249421845 249422163 -3834420 + L1M4 LINE L1 4938 5268 -878 1803 167 24 0 chr2 249422175 249422463 -3834120 + AluJb SINE Alu 11 305 -7 5633 112 18 11 chr2 249422474 249423843 -3832740 + L1PA15 LINE L1 4793 6162 -3 453 309 55 12 chr2 249423890 249424055 -3832528 + L1M4 LINE L1 4272 4443 -1703 40 37 0 0 chr2 249424275 249424329 -3832254 + AT_rich Low_complexity Low_complexity 1 54 0 3314 113 41 2 chr2 249425147 249425714 -3830869 - L1MA5A LINE L1 -2 6295 5707 39462 66 9 2 chr2 249425722 249431822 -3824761 - L1PA5 LINE L1 -5 6149 4 333 0 0 0 chr2 249432047 249432084 -3824499 + (TAA)n Simple_repeat Simple_repeat 1 37 0 23 68 0 0 chr2 249432153 249432197 -3824386 + AT_rich Low_complexity Low_complexity 1 44 0 2279 82 0 4 chr2 249432450 249432730 -3823853 + AluSg SINE Alu 3 281 -29 1144 199 104 60 chr2 249432764 249433195 -3823388 - LTR7 LTR ERV1 0 450 1 1209 230 81 53 chr2 249433899 249434294 -3822289 + MLT1D LTR MaLR 5 410 -95 2085 109 0 64 chr2 249434294 249434453 -3822130 - AluSx SINE Alu -20 292 161 2211 110 17 0 chr2 249434453 249434745 -3821838 - AluSx SINE Alu 0 312 16 2085 109 0 64 chr2 249434745 249434897 -3821686 - AluSx SINE Alu -151 161 1 4532 235 75 43 chr2 249435957 249437479 -3819104 - L1MC4a LINE L1 -7 7801 6231 356 279 60 42 chr2 249438190 249438339 -3818244 - L1MEc LINE L1 -4615 1600 1436 1399 152 141 7 chr2 249438339 249438636 -3817947 - MER1B DNA MER1_type 0 337 1 356 279 60 42 chr2 249438636 249438757 -3817826 - L1MEc LINE L1 -4779 1436 1319 600 275 73 20 chr2 249438900 249439147 -3817436 - L1MEc LINE L1 -5643 753 494 1078 202 202 9 chr2 249439170 249439517 -3817066 - L1MEc LINE L1 -5973 423 10 182 196 130 0 chr2 249440483 249440529 -3816054 + L2 LINE L2 3220 3271 -1 213 125 0 25 chr2 249441800 249441840 -3814743 + (CCCCCG)n Simple_repeat Simple_repeat 1 39 0 22 0 0 0 chr2 249441851 249441873 -3814710 + GC_rich Low_complexity Low_complexity 1 22 0 203 196 0 20 chr2 249442038 249442089 -3814494 + G-rich Low_complexity Low_complexity 5 54 0 2347 103 0 10 chr2 249443818 249444118 -3812465 + AluSq SINE Alu 1 297 -16 250 226 32 121 chr2 249446877 249447001 -3809582 + MER20 DNA MER1_type 107 219 0 677 139 0 15 chr2 249447493 249447630 -3808953 + (GGGGA)n Simple_repeat Simple_repeat 2 136 0 484 241 167 0 chr2 249447652 249447814 -3808769 - MER53 DNA DNA 0 189 1 1243 143 26 39 chr2 249448798 249448976 -3807607 - Tigger2a DNA MER2_type -2274 444 268 2142 134 3 0 chr2 249448976 249449281 -3807302 - AluSq SINE Alu -7 306 1 1243 143 26 39 chr2 249449281 249449333 -3807250 - Tigger2a DNA MER2_type -2450 268 217 853 224 0 6 chr2 249449333 249449494 -3807089 + AluSg/x SINE Alu 130 289 -23 768 138 99 55 chr2 249449499 249449680 -3806903 - Tigger2a DNA MER2_type -243 191 3 2261 121 3 0 chr2 249450290 249450596 -3805987 - AluSx SINE Alu -5 307 1 201 39 0 0 chr2 249450830 249450856 -3805727 + (A)n Simple_repeat Simple_repeat 1 26 0 3002 161 66 14 chr2 249451518 249452141 -3804442 - L1MB3 LINE L1 -3 6180 5526 302 185 62 0 chr2 249452247 249452312 -3804271 - L1MB3 LINE L1 -655 5516 5448 526 194 0 0 chr2 249454030 249454133 -3802450 + AluJb SINE Alu 200 302 -10 462 175 10 0 chr2 249454144 249454241 -3802342 + L1MB8 LINE L1 6070 6167 -11 319 313 0 0 chr2 249454851 249454947 -3801636 + MIR SINE MIR 26 121 -141 1855 155 24 10 chr2 249454996 249455292 -3801291 + AluJb SINE Alu 1 300 -12 342 289 16 0 chr2 249456667 249456788 -3799795 + LTR67 LTR ERVL 431 553 -4 241 278 43 35 chr2 249458228 249458343 -3798240 + MIR SINE MIR 68 183 -79 24 0 0 0 chr2 249461732 249461756 -3794827 + AT_rich Low_complexity Low_complexity 1 24 0 573 39 26 0 chr2 249461773 249461851 -3794732 + L1PA5 LINE L1 6075 6154 0 2474 89 0 0 chr2 249461855 249462159 -3794424 + AluSx SINE Alu 1 304 -8 376 225 83 71 chr2 249462253 249462422 -3794161 + MLT1D LTR MaLR 8 178 -327 1284 154 9 13 chr2 249462427 249462654 -3793929 - L1MC4a LINE L1 -907 6901 6676 1186 178 80 15 chr2 249462810 249463074 -3793509 - MLT2C1 LTR ERVL -116 281 1 2267 270 79 41 chr2 249463075 249464276 -3792307 - L1MC4a LINE L1 -750 5396 4918 1910 182 0 3 chr2 249465681 249465994 -3790589 + AluJb SINE Alu 1 312 0 216 0 0 0 chr2 249466060 249466084 -3790499 + (T)n Simple_repeat Simple_repeat 1 24 0 1439 167 91 0 chr2 249469805 249470069 -3786514 + AluJb SINE Alu 2 289 -13 2269 94 14 3 chr2 249470210 249470498 -3786085 - AluSx SINE Alu -21 291 1 381 309 77 15 chr2 249470501 249470735 -3785848 - L1MC/D LINE L1 -523 5598 5352 612 25 38 0 chr2 249470802 249470882 -3785701 - L1MC1 LINE L1 0 6333 6251 2257 97 27 3 chr2 249470913 249471212 -3785371 - AluSx SINE Alu -6 306 1 1419 137 10 0 chr2 249471847 249472051 -3784532 - AluJo SINE Alu -84 228 23 2303 108 0 0 chr2 249472352 249472649 -3783934 - AluJb SINE Alu -15 297 1 1057 324 126 53 chr2 249472650 249473283 -3783300 - L1MC/D LINE L1 -2548 3598 3013 2577 60 0 10 chr2 249473283 249473597 -3782986 - AluY SINE Alu 0 311 1 1057 324 126 53 chr2 249473597 249474264 -3782319 - L1MC/D LINE L1 -3133 3013 2203 1952 134 69 3 chr2 249474416 249474707 -3781876 - AluJo SINE Alu -2 310 1 230 116 23 0 chr2 249474883 249474926 -3781657 + CT-rich Low_complexity Low_complexity 1 44 0 357 340 36 50 chr2 249475162 249475465 -3781118 - HAL1b LINE L1 -703 645 347 1495 121 5 0 chr2 249475804 249476003 -3780580 + AluSx SINE Alu 1 200 -112 4406 176 51 14 chr2 249477596 249479205 -3777378 - L1MB8 LINE L1 -177 6001 4328 2445 129 20 56 chr2 249479205 249479565 -3777018 + Tigger2a DNA MER2_type 2 344 -2364 2080 131 7 10 chr2 249479565 249479862 -3776721 + AluSx SINE Alu 1 296 -16 2445 129 20 56 chr2 249479862 249479950 -3776633 + Tigger2a DNA MER2_type 344 434 0 4406 176 51 14 chr2 249479950 249479963 -3776620 - L1MB8 LINE L1 -1850 4328 4317 35 0 0 0 chr2 249480066 249480101 -3776482 + AT_rich Low_complexity Low_complexity 1 35 0 2257 109 3 0 chr2 249480215 249480519 -3776064 - AluSx SINE Alu -7 305 1 1017 121 0 14 chr2 249481032 249481173 -3775410 - AluSq/x SINE Alu -174 139 1 1142 164 40 4 chr2 249481186 249481412 -3775171 + L1M4 LINE L1 4962 5195 -951 376 341 35 28 chr2 249481456 249481740 -3774843 + AluSc SINE Alu 1 286 -13 243 0 0 0 chr2 249481757 249481784 -3774799 + (TA)n Simple_repeat Simple_repeat 2 28 0 1860 159 14 6 chr2 249481785 249482138 -3774445 + L1MC3 LINE L1 7429 7784 -1 2612 153 32 36 chr2 249482952 249483406 -3773177 - LOR1a LTR ERV1 0 497 43 180 77 0 0 chr2 249483406 249483432 -3773151 + (TTTTG)n Simple_repeat Simple_repeat 1 26 0 1729 123 60 37 chr2 249483436 249483705 -3772878 - AluSx SINE Alu -37 275 1 2612 153 32 36 chr2 249483705 249483743 -3772840 - LOR1a LTR ERV1 -457 40 2 1878 145 0 74 chr2 249484143 249484327 -3772256 - AluSx SINE Alu -11 301 150 2514 65 3 10 chr2 249484327 249484634 -3771949 - AluY SINE Alu -6 305 1 1878 145 0 74 chr2 249484634 249484774 -3771809 - AluSx SINE Alu -162 150 1 247 258 21 43 chr2 249485143 249485236 -3771347 - MLT1E LTR MaLR -87 537 447 2519 149 130 9 chr2 249485244 249485778 -3770805 + LTR28 LTR ERV1 10 1251 -444 945 244 57 35 chr2 249485856 249486139 -3770444 - MLT1E LTR MaLR -262 331 43 252 180 82 0 chr2 249486365 249486426 -3770157 - MER91B DNA MER1_type -122 68 3 2283 98 3 0 chr2 249486942 249487254 -3769329 + AluSx SINE Alu 1 313 0 889 201 45 96 chr2 249487294 249487335 -3769248 + L1M4 LINE L1 2697 2739 -3407 1434 94 40 13 chr2 249487335 249487434 -3769149 - MER30 DNA MER1_type 0 230 135 1897 124 4 0 chr2 249487434 249487706 -3768877 + AluSx SINE Alu 35 307 0 1434 94 40 13 chr2 249487706 249487829 -3768754 - MER30 DNA MER1_type -95 135 1 889 201 45 96 chr2 249487829 249488055 -3768528 + L1M4 LINE L1 2739 2946 -3200 2363 103 0 3 chr2 249488055 249488357 -3768226 + AluSg SINE Alu 1 301 -9 889 201 45 96 chr2 249488357 249488422 -3768161 + L1M4 LINE L1 2946 3013 -3133 295 253 95 11 chr2 249488800 249488895 -3767688 - MIR SINE MIR -70 192 90 656 193 0 7 chr2 249489916 249490061 -3766522 + (TG)n Simple_repeat Simple_repeat 2 145 0 2164 86 0 18 chr2 249490593 249490872 -3765711 + AluSx SINE Alu 1 274 -38 204 40 0 0 chr2 249490874 249490899 -3765684 + (GGGGA)n Simple_repeat Simple_repeat 5 29 0 254 332 78 5 chr2 249491134 249491351 -3765232 - LTR16B LTR ERVL -190 274 42 556 239 173 31 chr2 249491363 249491618 -3764965 + MLT1C LTR MaLR 64 354 -113 270 0 0 0 chr2 249492131 249492161 -3764422 + (TG)n Simple_repeat Simple_repeat 2 31 0 2385 95 3 13 chr2 249492190 249492505 -3764078 - AluSx SINE Alu 0 312 1 747 246 65 4 chr2 249492983 249493006 -3763577 + L1ME LINE L1 5532 5552 -569 1916 111 7 38 chr2 249493006 249493295 -3763288 + AluSx SINE Alu 1 280 -32 657 47 0 0 chr2 249493295 249493380 -3763203 + (TAGA)n Simple_repeat Simple_repeat 2 86 0 747 246 65 4 chr2 249493380 249493594 -3762989 + L1ME LINE L1 5551 5778 -343 2156 109 0 35 chr2 249493730 249494042 -3762541 - AluSx SINE Alu -11 301 1 2305 109 10 0 chr2 249494321 249494624 -3761959 - AluSx SINE Alu -5 307 2 200 313 16 0 chr2 249494625 249494689 -3761894 + MIR SINE MIR 51 115 -147 1812 171 3 7 chr2 249495416 249495708 -3760875 + AluJb SINE Alu 1 291 -21 23 68 0 0 chr2 249495734 249495778 -3760805 + AT_rich Low_complexity Low_complexity 1 44 0 253 291 8 77 chr2 249495796 249495858 -3760725 + MIR SINE MIR 34 86 -176 1958 129 35 29 chr2 249495858 249496168 -3760415 + AluJb SINE Alu 1 312 0 253 291 8 77 chr2 249496168 249496222 -3760361 + MIR SINE MIR 86 142 -120 1716 161 45 32 chr2 249496524 249496717 -3759866 - MLT1B LTR MaLR -1 364 183 2272 125 0 0 chr2 249496717 249497014 -3759569 - AluSx SINE Alu -15 297 1 1716 161 45 32 chr2 249497014 249497193 -3759390 - MLT1B LTR MaLR -182 183 8 691 157 0 0 chr2 249497698 249497806 -3758777 + AluSq/x SINE Alu 18 125 -188 358 294 25 0 chr2 249497961 249498080 -3758503 - MIR SINE MIR -113 149 28 895 92 7 7 chr2 249499393 249499534 -3757049 + (TTTTC)n Simple_repeat Simple_repeat 2 142 0 2077 100 16 29 chr2 249499766 249500076 -3756507 + AluSg SINE Alu 1 306 -4 1391 141 5 0 chr2 249500214 249500406 -3756177 + AluSx SINE Alu 2 194 -118 2035 104 24 3 chr2 249500660 249500947 -3755636 - AluSq SINE Alu -20 293 1 1335 270 106 50 chr2 249500966 249501794 -3754789 + L2 LINE L2 2381 3257 -15 1747 167 7 14 chr2 249501794 249502081 -3754502 + AluJb SINE Alu 8 292 -20 1335 270 106 50 chr2 249502081 249502098 -3754485 + L2 LINE L2 3257 3272 0 1908 158 0 29 chr2 249502207 249502523 -3754060 + AluJo SINE Alu 1 307 -5 2350 166 29 23 chr2 249502837 249503319 -3753264 + MER31A LTR ERV1 1 485 0 2152 129 3 3 chr2 249503441 249503751 -3752832 + AluSx SINE Alu 3 312 0 2285 100 21 0 chr2 249503944 249504235 -3752348 + AluSx SINE Alu 1 297 -15 2362 90 3 7 chr2 249504236 249504535 -3752048 + AluY SINE Alu 1 298 -13 1933 241 29 25 chr2 249504539 249505132 -3751451 + L1M4 LINE L1 3741 4335 -1811 314 147 0 73 chr2 249505140 249505208 -3751375 + L1MC3 LINE L1 6156 6218 -1567 2324 80 17 13 chr2 249505237 249505536 -3751047 + AluY SINE Alu 5 304 -7 606 262 67 0 chr2 249505541 249505705 -3750878 + FAM SINE Alu 1 175 0 1934 120 29 6 chr2 249505705 249505722 -3750861 - MER4D LTR ERV1 -579 324 309 2134 127 0 0 chr2 249505722 249506006 -3750577 + AluSx SINE Alu 1 284 -28 237 83 0 0 chr2 249506006 249506042 -3750541 + (TA)n Simple_repeat Simple_repeat 2 37 0 1934 120 29 6 chr2 249506042 249506339 -3750244 - MER4D LTR ERV1 -593 310 2 1889 160 45 70 chr2 249506345 249506789 -3749794 + L1MC3 LINE L1 6213 6645 -1140 1348 167 29 46 chr2 249506789 249506816 -3749767 - Tigger3(Golem) DNA MER2_type 0 3038 3012 3874 98 25 0 chr2 249506816 249507217 -3749366 - MER61E LTR ERV1 -4 565 145 2094 84 4 0 chr2 249507217 249507480 -3749103 - AluSp SINE Alu 0 313 50 3874 98 25 0 chr2 249507480 249507629 -3748954 - MER61E LTR ERV1 -424 145 1 1348 167 29 46 chr2 249507629 249507882 -3748701 - Tigger3(Golem) DNA MER2_type -26 3012 2763 1377 181 145 21 chr2 249507899 249508286 -3748297 - LTR47A LTR ERVL -17 435 1 397 228 0 0 chr2 249508286 249508362 -3748221 - Tigger3(Golem) DNA MER2_type -2952 77 2 411 233 8 75 chr2 249508363 249508413 -3748170 + L1MC3 LINE L1 6644 6696 -1089 584 217 9 9 chr2 249508413 249508528 -3748055 + FLAM_A SINE Alu 1 115 -18 603 117 0 0 chr2 249508530 249508624 -3747959 + (CA)n Simple_repeat Simple_repeat 2 95 0 411 233 8 75 chr2 249508624 249508690 -3747893 + L1MC3 LINE L1 6697 6755 -1030 2190 122 7 3 chr2 249508868 249509172 -3747411 - AluSx SINE Alu -7 305 1 1891 175 0 10 chr2 249511544 249511847 -3744736 - AluJo SINE Alu -12 300 1 2241 108 0 34 chr2 249512648 249512685 -3743898 - AluSx SINE Alu 0 312 275 194 0 39 0 chr2 249512685 249512711 -3743872 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2241 108 0 34 chr2 249512711 249512996 -3743587 - AluSx SINE Alu -37 275 1 2274 97 3 3 chr2 249513970 249514268 -3742315 - AluSx SINE Alu -14 298 1 427 300 139 52 chr2 249514280 249514547 -3742036 - L1MCc LINE L1 -2145 4796 4507 932 72 0 86 chr2 249514692 249514831 -3741752 + FLAM_C SINE Alu 9 135 -8 1975 154 0 3 chr2 249515023 249515358 -3741225 - AluSx SINE Alu 0 312 1 636 333 60 27 chr2 249515408 249515774 -3740809 - L1MCc LINE L1 -3042 3899 3522 455 242 73 0 chr2 249516336 249516460 -3740123 - L2 LINE L2 -220 3052 2920 257 198 13 38 chr2 249517190 249517347 -3739236 + GA-rich Low_complexity Low_complexity 1 153 0 808 98 0 0 chr2 249517939 249518041 -3738542 - FLAM_C SINE Alu -26 117 16 676 260 41 29 chr2 249518166 249518412 -3738171 - L1ME LINE L1 -381 5740 5492 1773 147 10 36 chr2 249518417 249518590 -3737993 - AluJo SINE Alu -13 299 136 1645 99 0 0 chr2 249518590 249518803 -3737780 - AluY SINE Alu -10 301 89 858 143 0 8 chr2 249518803 249518936 -3737647 - AluJo/FLAM SINE Alu -180 132 1 2365 88 0 19 chr2 249519029 249519346 -3737237 + AluY SINE Alu 1 311 0 1102 162 0 0 chr2 249519352 249519519 -3737064 + AluSg/x SINE Alu 128 294 -16 264 305 74 0 chr2 249519670 249519765 -3736818 - MIR SINE MIR -62 146 45 2592 263 116 41 chr2 249521112 249521303 -3735280 - L1MCc LINE L1 -4475 2466 2291 2446 98 7 0 chr2 249521303 249521608 -3734975 - AluSx SINE Alu -5 307 1 2592 263 116 41 chr2 249521608 249522996 -3733587 - L1MCc LINE L1 -4650 2291 1008 261 0 0 0 chr2 249522996 249523025 -3733558 + (TGG)n Simple_repeat Simple_repeat 1 29 0 2140 94 0 40 chr2 249523025 249523322 -3733261 - AluSg SINE Alu -25 285 1 2592 263 116 41 chr2 249523322 249523558 -3733025 - L1MCc LINE L1 -5932 1009 484 444 235 0 37 chr2 249524796 249524983 -3731600 + (CA)n Simple_repeat Simple_repeat 1 180 0 327 291 0 11 chr2 249525061 249525243 -3731340 + (CA)n Simple_repeat Simple_repeat 1 180 0 320 290 0 17 chr2 249525432 249525608 -3730975 + (CA)n Simple_repeat Simple_repeat 2 174 0 272 203 304 0 chr2 249525762 249525841 -3730742 - L1M4 LINE L1 -6163 379 277 2271 178 36 28 chr2 249525865 249526394 -3730189 - MER89 LTR ERV1 -25 534 2 2099 112 29 0 chr2 249526396 249526674 -3729909 - AluSx SINE Alu -21 291 6 752 264 26 53 chr2 249526683 249526948 -3729635 - L1M4 LINE L1 -6283 259 2 820 123 0 43 chr2 249526962 249527100 -3729483 - FLAM_C SINE Alu 0 133 2 518 125 0 23 chr2 249527257 249527345 -3729238 - LTR23 LTR ERV1 -32 405 320 7292 173 118 51 chr2 249527584 249529229 -3727354 + MER52A LTR ERV1 1 1755 0 1686 201 13 0 chr2 249530175 249530483 -3726100 + AluJb SINE Alu 1 312 0 670 158 12 38 chr2 249530484 249530745 -3725838 + GA-rich Low_complexity Low_complexity 1 254 0 1245 125 129 3 chr2 249530773 249531010 -3725573 - MLT1D LTR MaLR 0 505 252 303 93 0 0 chr2 249531016 249531059 -3725524 + (TCCC)n Simple_repeat Simple_repeat 1 43 0 1231 182 72 41 chr2 249531061 249531352 -3725231 - AluJo SINE Alu -2 300 1 294 267 12 0 chr2 249531398 249531484 -3725099 + MER34 LTR ERV1 13 99 -443 609 253 34 59 chr2 249531648 249531763 -3724820 + MER34B LTR ERV1 271 378 -187 2437 104 0 0 chr2 249531763 249532070 -3724513 - AluSx SINE Alu -5 307 1 609 253 34 59 chr2 249532070 249532191 -3724392 + MER34B LTR ERV1 378 501 -64 2501 75 3 0 chr2 249532268 249532574 -3724009 - AluY SINE Alu -4 307 1 1178 126 11 5 chr2 249532574 249532764 -3723819 - MLT1D LTR MaLR -314 191 1 2115 124 31 0 chr2 249532922 249533212 -3723371 + AluSx SINE Alu 1 299 -13 1953 130 71 11 chr2 249533268 249533622 -3722961 + THE1C LTR MaLR 1 375 0 1948 124 36 4 chr2 249533782 249534091 -3722492 - AluSx SINE Alu 0 318 1 1726 164 0 8 chr2 249534267 249534535 -3722048 + AluJb SINE Alu 1 266 -46 480 133 0 0 chr2 249534535 249534610 -3721973 + MSTA LTR MaLR 352 426 -2 1888 188 0 3 chr2 249534629 249534937 -3721646 + AluJb SINE Alu 5 311 -1 1794 164 47 3 chr2 249534942 249535241 -3721342 + AluJb SINE Alu 1 312 0 1460 177 63 0 chr2 249535250 249535504 -3721079 + AluJb SINE Alu 40 309 -3 725 126 7 20 chr2 249535530 249535681 -3720902 + (GAAA)n Simple_repeat Simple_repeat 4 152 0 2152 102 0 0 chr2 249535709 249535973 -3720610 + AluSx SINE Alu 12 275 -37 233 0 62 0 chr2 249535977 249536009 -3720574 + (CAAAA)n Simple_repeat Simple_repeat 1 34 0 873 280 57 11 chr2 249536062 249536463 -3720120 + L1ME LINE L1 5237 5659 -503 467 167 44 0 chr2 249536475 249536565 -3720018 - MER84 LTR ERVI 0 507 414 2213 133 3 0 chr2 249536566 249536867 -3719716 + AluSx SINE Alu 1 302 -10 450 0 0 0 chr2 249536867 249536917 -3719666 + (GGAA)n Simple_repeat Simple_repeat 1 50 0 2262 118 19 13 chr2 249536917 249537291 -3719292 - MER84 LTR ERVI -90 417 42 32 26 0 0 chr2 249537397 249537436 -3719147 + AT_rich Low_complexity Low_complexity 1 39 0 249 196 0 0 chr2 249537436 249537487 -3719096 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 2278 103 3 3 chr2 249537488 249537779 -3718804 - AluSx SINE Alu -21 291 1 1905 181 3 13 chr2 249537782 249538097 -3718486 - AluJb SINE Alu 0 312 1 1509 167 112 11 chr2 249538154 249538266 -3718317 + AluJo SINE Alu 1 100 -212 2336 88 7 10 chr2 249538266 249538574 -3718009 + AluSp SINE Alu 1 307 -6 1509 167 112 11 chr2 249538574 249538737 -3717846 + AluJo SINE Alu 100 304 -8 647 227 236 0 chr2 249538826 249539051 -3717532 - L1ME LINE L1 -487 5683 5406 373 168 38 0 chr2 249539051 249539153 -3717430 - FRAM SINE Alu -69 97 18 724 291 75 16 chr2 249539154 249539542 -3717041 - L1ME LINE L1 -759 5387 4977 1020 191 121 75 chr2 249540893 249541265 -3715318 + MLT1B LTR MaLR 2 390 0 1741 171 13 29 chr2 249541335 249541785 -3714798 - AluJo SINE Alu 0 445 1 248 266 51 0 chr2 249542663 249542742 -3713841 - MLT1D LTR MaLR -35 432 350 1591 219 37 28 chr2 249542742 249543200 -3713383 - MLT1B LTR MaLR 0 390 1 * 1595 173 99 9 chr2 249543200 249543540 -3713043 - MLT1D LTR MaLR -134 371 1 2059 149 0 3 chr2 249543650 249543952 -3712631 + AluSx SINE Alu 1 301 -11 1089 178 75 93 chr2 249545619 249545995 -3710588 + MLT1B LTR MaLR 18 386 -4 264 276 35 0 chr2 249546551 249546609 -3709974 + MIR SINE MIR 15 74 -188 1251 214 67 38 chr2 249546624 249547003 -3709580 - LTR10C LTR ERV1 -43 590 186 5189 118 39 26 chr2 249547118 249547431 -3709152 + MER4D LTR ERV1 1 308 -595 2131 92 58 10 chr2 249547431 249547723 -3708860 - AluSg SINE Alu -4 306 1 5189 118 39 26 chr2 249547723 249548146 -3708437 + MER4D LTR ERV1 308 754 -149 3558 137 60 2 chr2 249548146 249548746 -3707837 - MER41B LTR ERV1 0 635 1 5189 118 39 26 chr2 249548746 249548899 -3707684 + MER4D LTR ERV1 754 903 0 443 125 114 0 chr2 249548902 249548990 -3707593 + MIR SINE MIR 101 198 -64 2190 98 41 0 chr2 249549557 249549852 -3706731 - AluSx SINE Alu -5 307 1 1831 125 20 24 chr2 249549914 249550209 -3706374 - AluJb SINE Alu -15 297 4 22 80 0 0 chr2 249551240 249551290 -3705293 + GC_rich Low_complexity Low_complexity 1 50 0 23 78 0 0 chr2 249551359 249551410 -3705173 + GC_rich Low_complexity Low_complexity 1 51 0 26 30 0 0 chr2 249551432 249551465 -3705118 + GC_rich Low_complexity Low_complexity 1 33 0 1401 198 11 11 chr2 249551962 249552235 -3704348 + AluSx SINE Alu 10 282 -30 23 33 0 0 chr2 249552254 249552284 -3704299 + GC_rich Low_complexity Low_complexity 1 30 0 306 240 96 10 chr2 249552651 249552755 -3703828 + MIR SINE MIR 41 153 -55 180 310 67 71 chr2 249552801 249553040 -3703543 - L2 LINE L2 -208 3064 2827 299 200 227 0 chr2 249554825 249554935 -3701648 - L1MA10 LINE L1 0 6334 6200 1774 166 3 33 chr2 249554936 249555243 -3701340 + AluJb SINE Alu 2 299 -13 209 221 142 71 chr2 249555289 249555416 -3701167 + MIR3 SINE MIR 70 205 -3 2044 115 24 17 chr2 249555570 249555865 -3700718 - AluSq SINE Alu -16 297 1 231 36 0 0 chr2 249556169 249556197 -3700386 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 2032 120 0 4 chr2 249556200 249556474 -3700109 - AluSc SINE Alu -36 273 1 1093 133 20 10 chr2 249556618 249556813 -3699770 + L1MC1 LINE L1 6128 6324 -9 2191 135 0 10 chr2 249557393 249557705 -3698878 - AluJb SINE Alu -3 309 1 256 319 118 24 chr2 249558326 249558495 -3698088 + MIR3 SINE MIR 1 185 -23 919 177 12 0 chr2 249558846 249559010 -3697573 - AluJo/FRAM SINE Alu 0 302 137 1502 132 151 0 chr2 249559013 249559123 -3697460 - AluSq SINE Alu -6 297 205 1552 142 5 5 chr2 249559123 249559342 -3697241 - AluSp SINE Alu -94 219 1 1502 132 151 0 chr2 249559342 249559354 -3697229 - AluSq SINE Alu -98 205 196 2525 83 0 3 chr2 249559354 249559667 -3696916 - AluSx SINE Alu 0 312 1 1502 132 151 0 chr2 249559667 249559801 -3696782 - AluSq SINE Alu -107 196 1 705 178 0 0 chr2 249559806 249559924 -3696659 - FLAM_C SINE Alu -15 118 1 1944 146 3 30 chr2 249559958 249560260 -3696323 - AluJb SINE Alu -15 297 4 1898 124 4 0 chr2 249560540 249560790 -3695793 - AluSx SINE Alu -61 251 1 1136 174 122 70 chr2 249561291 249561636 -3694947 - MLT1A1 LTR MaLR -2 363 1 660 329 56 8 chr2 249562748 249563104 -3693479 - LTR16A LTR ERVL -6 444 72 1097 182 117 75 chr2 249565116 249565474 -3691109 - MLT1A2 LTR MaLR 0 374 2 2055 154 0 0 chr2 249566465 249566763 -3689820 - AluJb SINE Alu 0 312 15 350 265 39 10 chr2 249566770 249566872 -3689711 - MER5B DNA MER1_type -39 139 35 318 306 9 0 chr2 249566876 249566987 -3689596 + L1MB8 LINE L1 6064 6175 -3 780 183 0 0 chr2 249567854 249567985 -3688598 - FLAM_C SINE Alu -2 131 1 257 143 12 48 chr2 249568865 249568949 -3687634 + CT-rich Low_complexity Low_complexity 2 82 0 1050 196 0 0 chr2 249569625 249569804 -3686779 - AluJo SINE Alu -7 305 127 764 128 0 8 chr2 249569865 249569982 -3686601 - AluJo SINE Alu -194 118 3 4947 161 52 15 chr2 249569984 249570983 -3685600 - L1MA9 LINE L1 -59 6253 5159 1504 200 6 47 chr2 249570983 249571303 -3685280 - AluJb SINE Alu -4 308 2 4947 161 52 15 chr2 249571303 249572091 -3684492 - L1MA9 LINE L1 -1153 5159 4402 850 172 7 0 chr2 249572123 249572274 -3684309 - L1MA9 LINE L1 -1897 4249 4098 2243 122 0 0 chr2 249573016 249573312 -3683271 + AluSx SINE Alu 1 296 -16 1184 142 0 0 chr2 249573316 249573485 -3683098 + AluSg/x SINE Alu 133 301 -11 2040 136 0 0 chr2 249574216 249574503 -3682080 - AluSx SINE Alu -25 287 1 266 227 10 62 chr2 249574513 249574610 -3681973 - MER112 DNA MER1_type -168 92 1 288 98 359 11 chr2 249574848 249574940 -3681643 + L1MC5 LINE L1 7806 7929 -32 964 174 0 51 chr2 249575020 249575198 -3681385 - AluJ SINE Alu -15 297 129 1378 94 0 0 chr2 249575218 249575398 -3681185 + AluY SINE Alu 123 302 -9 850 145 8 0 chr2 249575408 249575532 -3681051 - AluJ SINE Alu -187 125 1 21 0 0 0 chr2 249576173 249576194 -3680389 + AT_rich Low_complexity Low_complexity 1 21 0 1513 118 9 0 chr2 249576209 249576420 -3680163 - AluSg/x SINE Alu 0 310 98 2113 124 3 3 chr2 249576482 249576781 -3679802 - AluSx SINE Alu -13 299 1 347 241 56 19 chr2 249577309 249577417 -3679166 + MIR3 SINE MIR 67 178 -30 2244 103 0 0 chr2 249577610 249577901 -3678682 - AluSg SINE Alu -19 291 1 1830 180 0 0 chr2 249578046 249578335 -3678248 + AluJb SINE Alu 1 289 -23 1339 113 0 0 chr2 249578713 249578890 -3677693 - AluSp SINE Alu 0 313 137 637 225 78 23 chr2 249579682 249579900 -3676683 + MIR SINE MIR 9 238 -24 2403 94 0 3 chr2 249581092 249581391 -3675192 - AluSx SINE Alu -14 298 1 2120 108 23 16 chr2 249581555 249581862 -3674721 + AluSx SINE Alu 1 309 -3 33 0 0 0 chr2 249582729 249582762 -3673821 + AT_rich Low_complexity Low_complexity 1 33 0 2380 203 130 52 chr2 249582769 249583686 -3672897 - L1ME2 LINE L1 -9 6155 5160 1435 162 79 35 chr2 249583687 249583977 -3672606 - AluSx SINE Alu -1 311 9 1359 252 52 14 chr2 249583982 249584406 -3672177 - L1ME2 LINE L1 -977 5169 4730 2415 92 3 0 chr2 249584433 249584737 -3671846 - AluSg SINE Alu -5 305 1 619 212 178 4 chr2 249584737 249584996 -3671587 - L1ME2 LINE L1 -2791 3355 3052 2323 201 43 64 chr2 249585056 249585649 -3670934 - L1ME1 LINE L1 -285 5881 5302 2482 74 7 0 chr2 249585649 249585948 -3670635 - AluSp SINE Alu -12 301 1 2323 201 43 64 chr2 249585948 249586014 -3670569 - L1ME1 LINE L1 -864 5302 5236 1704 101 35 11 chr2 249586151 249586438 -3670145 + AluY SINE Alu 1 294 -17 1321 111 0 6 chr2 249586693 249586873 -3669710 - AluSx SINE Alu -12 300 122 1168 22 0 0 chr2 249586900 249587034 -3669549 - L1PA2 LINE L1 -2 6153 6020 1023 106 0 0 chr2 249587034 249587166 -3669417 - AluSx SINE Alu -181 132 1 2284 90 0 62 chr2 249587239 249587561 -3669022 - AluSx SINE Alu -10 302 1 1655 210 133 76 chr2 249588389 249589222 -3667361 - L1ME1 LINE L1 -5 6230 5446 1872 196 24 79 chr2 249589222 249589754 -3666829 + MLT1D LTR MaLR 1 503 -2 1655 210 133 76 chr2 249589754 249589809 -3666774 - L1ME1 LINE L1 -789 5446 5396 1985 149 3 16 chr2 249589809 249590125 -3666458 - AluJb SINE Alu 0 312 1 1655 210 133 76 chr2 249590125 249590639 -3665944 - L1ME1 LINE L1 -839 5396 4913 2186 142 80 18 chr2 249590639 249591040 -3665543 - MSTB LTR MaLR 0 426 1 1655 210 133 76 chr2 249591040 249591376 -3665207 - L1ME1 LINE L1 -1322 4913 4597 2421 94 13 0 chr2 249591376 249591685 -3664898 - AluSp SINE Alu 0 313 1 1655 210 133 76 chr2 249591685 249591752 -3664831 - L1ME1 LINE L1 -1638 4597 4535 2098 141 0 0 chr2 249591752 249592051 -3664532 - AluSx SINE Alu -13 299 1 1655 210 133 76 chr2 249592051 249592593 -3663990 - L1ME1 LINE L1 -1700 4535 4025 1644 125 61 78 chr2 249592593 249592888 -3663695 - AluJb SINE Alu -22 290 1 1655 210 133 76 chr2 249592888 249593367 -3663216 - L1ME1 LINE L1 -2210 4025 3126 1153 264 176 22 chr2 249593370 249594249 -3662334 - L1ME1 LINE L1 -4419 1977 968 869 226 30 115 chr2 249594424 249594798 -3661785 - Charlie2a DNA MER1_type -103 2759 2431 2210 119 3 0 chr2 249594798 249595100 -3661483 - AluSg SINE Alu -7 303 1 869 226 30 115 chr2 249595100 249595193 -3661390 - Charlie2a DNA MER1_type -431 2431 2332 847 262 262 17 chr2 249595195 249596208 -3660375 + L2 LINE L2 2048 3311 -2 1939 204 95 79 chr2 249596218 249596512 -3660071 - Charlie2a DNA MER1_type -560 2302 2014 1862 162 3 20 chr2 249596512 249596809 -3659774 - AluJo SINE Alu -17 295 4 1939 204 95 79 chr2 249596809 249597321 -3659262 - Charlie2a DNA MER1_type -848 2014 1483 602 284 59 109 chr2 249597449 249597622 -3658961 - Charlie2a DNA MER1_type -2284 578 398 1731 152 64 14 chr2 249597622 249597919 -3658664 + AluJo SINE Alu 1 312 0 602 284 59 109 chr2 249597919 249598323 -3658260 - Charlie2a DNA MER1_type -2464 398 30 268 292 105 19 chr2 249599709 249599871 -3656712 + L1MC/D LINE L1 5008 5183 -963 300 286 66 50 chr2 249599952 249600134 -3656449 + L1MC/D LINE L1 5286 5470 -2338 318 253 46 0 chr2 249600685 249600772 -3655811 + L2 LINE L2 3212 3302 -11 221 116 116 0 chr2 249601446 249601489 -3655094 - L2 LINE L2 -1 3312 3265 709 130 0 0 chr2 249603188 249603319 -3653264 - AluSg/x SINE Alu 0 303 173 1771 116 90 0 chr2 249604015 249604282 -3652301 - AluSp SINE Alu -22 291 1 2241 109 3 7 chr2 249604282 249604586 -3651997 - AluSq SINE Alu -10 303 1 181 232 122 0 chr2 249604790 249604872 -3651711 + L2 LINE L2 3141 3232 -40 204 269 72 106 chr2 249605418 249605626 -3650957 - L2 LINE L2 -17 3255 3055 599 278 23 0 chr2 249605763 249605936 -3650647 - MLT1I LTR MaLR -232 177 1 251 266 76 0 chr2 249605989 249606068 -3650515 - L1ME4a LINE L1 -34 6087 6003 705 230 140 0 chr2 249606301 249606479 -3650104 - MER58C DNA MER1_type -9 206 4 356 307 51 47 chr2 249606528 249606785 -3649798 - L1ME4a LINE L1 -454 5667 5410 712 157 0 0 chr2 249606785 249606900 -3649683 - AluSg/x SINE Alu 0 309 195 206 212 30 30 chr2 249607466 249607532 -3649051 + L3 LINE CR1 1053 1118 -459 206 361 9 0 chr2 249607627 249607735 -3648848 + L3 LINE CR1 1464 1572 -5 230 29 59 0 chr2 249608909 249608943 -3647640 + (GTTTG)n Simple_repeat Simple_repeat 5 40 0 1544 182 8 0 chr2 249608943 249609196 -3647387 - AluJo SINE Alu -31 281 27 183 227 0 0 chr2 249610761 249610805 -3645778 + MIR SINE MIR 79 122 -140 2356 74 3 3 chr2 249611014 249611310 -3645273 - AluY SINE Alu -15 296 1 384 322 72 49 chr2 249611844 249612232 -3644351 + L1ME LINE L1 5267 5663 -458 30 27 0 0 chr2 249613534 249613571 -3643012 + AT_rich Low_complexity Low_complexity 1 37 0 424 105 0 0 chr2 249613584 249613641 -3642942 - U6 snRNA snRNA -50 57 1 22 0 0 0 chr2 249613853 249613875 -3642708 + AT_rich Low_complexity Low_complexity 1 22 0 2415 52 0 26 chr2 249613884 249614190 -3642393 + AluY SINE Alu 1 298 -13 405 289 86 27 chr2 249614275 249614462 -3642121 + MIR SINE MIR 44 241 -21 1748 151 60 17 chr2 249614511 249614810 -3641773 - AluJo SINE Alu 0 312 1 1423 147 155 8 chr2 249616942 249617193 -3639390 + AluJb SINE Alu 1 288 -24 887 136 8 0 chr2 249617226 249617358 -3639225 + FLAM_C SINE Alu 1 133 0 2132 114 0 10 chr2 249618719 249619016 -3637567 + AluSq SINE Alu 1 294 -19 2381 92 3 0 chr2 249619463 249619768 -3636815 - AluSx SINE Alu -6 306 1 180 97 0 0 chr2 249620728 249620759 -3635824 + (TTTTG)n Simple_repeat Simple_repeat 4 34 0 1680 159 0 24 chr2 249620761 249621056 -3635527 - AluJo SINE Alu -24 288 1 1413 171 70 0 chr2 249621136 249621394 -3635189 + AluJb SINE Alu 6 281 -31 32 0 0 0 chr2 249621579 249621611 -3634972 + AT_rich Low_complexity Low_complexity 1 32 0 1543 149 24 12 chr2 249622196 249622451 -3634132 - AluSx SINE Alu -20 292 35 2183 97 0 0 chr2 249623529 249623819 -3632764 + AluSq SINE Alu 1 290 -23 26 30 0 0 chr2 249623819 249623852 -3632731 + AT_rich Low_complexity Low_complexity 1 33 0 318 273 55 55 chr2 249623872 249624037 -3632546 - L2 LINE L2 -307 3006 2842 * 523 319 38 9 chr2 249624028 249624241 -3632342 - MIR SINE MIR -27 235 17 333 231 125 10 chr2 249625538 249625642 -3630941 + MIR3 SINE MIR 81 196 -12 1747 152 10 24 chr2 249629421 249629718 -3626865 - AluSx SINE Alu -19 293 1 228 67 0 0 chr2 249630225 249630255 -3626328 + (T)n Simple_repeat Simple_repeat 1 30 0 416 189 110 55 chr2 249632135 249632262 -3624321 + L1MD2 LINE L1 361 494 -6227 * 2628 222 115 35 chr2 249632259 249632893 -3623690 + L1MD2 LINE L1 1007 1589 -4951 1578 112 123 11 chr2 249632893 249633161 -3623422 + AluSg1 SINE Alu 1 298 -11 2628 222 115 35 chr2 249633161 249633593 -3622990 + L1MD2 LINE L1 1589 1985 -4555 1559 164 10 32 chr2 249633593 249633730 -3622853 + AluJo SINE Alu 1 140 -172 2292 70 3 3 chr2 249633730 249634028 -3622555 + AluY SINE Alu 1 298 -13 1559 164 10 32 chr2 249634028 249634200 -3622383 + AluJo SINE Alu 140 303 -9 2628 222 115 35 chr2 249634200 249634342 -3622241 + L1MD2 LINE L1 1985 2401 -4139 1125 215 52 115 chr2 249634344 249634373 -3622210 + L1M4 LINE L1 3 32 -6510 2105 119 0 0 chr2 249634373 249634667 -3621916 - AluSx SINE Alu -18 294 1 1125 215 52 115 chr2 249634667 249634851 -3621732 + L1M4 LINE L1 32 226 -6316 2089 117 7 3 chr2 249634851 249635158 -3621425 - AluSp SINE Alu -4 309 2 1125 215 52 115 chr2 249635158 249635310 -3621273 + L1M4 LINE L1 226 337 -6205 1950 91 4 0 chr2 249635310 249635574 -3621009 - AluSq SINE Alu -48 265 1 1125 215 52 115 chr2 249635574 249635667 -3620916 + L1M4 LINE L1 337 434 -6108 1473 211 141 17 chr2 249635713 249635929 -3620654 + L1M4 LINE L1 4837 5025 -1619 2327 105 54 20 chr2 249635929 249636281 -3620302 + THE1B LTR MaLR 1 364 0 1473 211 141 17 chr2 249636281 249636524 -3620059 + L1M4 LINE L1 5025 5353 -1291 548 191 0 9 chr2 249636525 249636630 -3619953 - FLAM_A SINE Alu -14 128 25 1908 133 0 13 chr2 249636650 249636951 -3619632 - AluJb SINE Alu -15 297 1 240 210 32 16 chr2 249636951 249637013 -3619570 + L1M4 LINE L1 5341 5403 -1241 1502 112 9 0 chr2 249637077 249637291 -3619292 + AluSg/x SINE Alu 85 300 -10 849 161 43 6 chr2 249637306 249637468 -3619115 + L1MB7 LINE L1 5998 6165 -19 828 247 150 3 chr2 249637473 249637958 -3618625 + L1MD2 LINE L1 2385 2942 -3598 2812 200 70 47 chr2 249637976 249638561 -3618022 + L1MD2 LINE L1 5994 6564 -189 843 64 0 0 chr2 249638561 249638671 -3617912 + (TA)n Simple_repeat Simple_repeat 2 111 0 2812 200 70 47 chr2 249638671 249638688 -3617895 + L1MD2 LINE L1 6564 6579 -174 1993 108 7 0 chr2 249638688 249638966 -3617617 - AluSg SINE Alu -30 280 1 2812 200 70 47 chr2 249638966 249639031 -3617552 + L1MD2 LINE L1 6579 6641 -112 1507 132 24 114 chr2 249639031 249639372 -3617211 - AluYb8 SINE Alu -8 310 1 2812 200 70 47 chr2 249639372 249639442 -3617141 + L1MD2 LINE L1 6641 6750 -3 1626 129 32 22 chr2 249639452 249639730 -3616853 + AluJb SINE Alu 1 281 -31 252 0 0 0 chr2 249639733 249639761 -3616822 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 2182 95 0 0 chr2 249639815 249640110 -3616473 + AluSx SINE Alu 1 295 -17 313 261 54 0 chr2 249640113 249640205 -3616378 + L1M4 LINE L1 1490 1586 -5239 358 309 134 26 chr2 249640264 249640458 -3616125 + L1M4 LINE L1 1521 1735 -4911 786 148 15 7 chr2 249640461 249640596 -3615987 - BC200 scRNA scRNA -64 136 1 531 265 99 20 chr2 249640596 249640898 -3615685 + L1M4 LINE L1 1872 2197 -4628 609 247 142 0 chr2 249640899 249641089 -3615494 - MER20 DNA MER1_type 0 219 3 378 214 107 9 chr2 249641110 249641222 -3615361 - L1MEd LINE L1 -5045 1074 952 1574 154 102 9 chr2 249641238 249641562 -3615021 - L1MC1 LINE L1 -6 6327 5974 22 0 0 0 chr2 249641638 249641660 -3614923 + AT_rich Low_complexity Low_complexity 1 22 0 2517 83 8 17 chr2 249641725 249642085 -3614498 - pTR5 LTR ERV1 -2016 422 66 364 227 21 0 chr2 249642085 249642182 -3614401 - LTR30 LTR ERV1 -80 642 544 3329 148 33 37 chr2 249642182 249642993 -3613590 - pTR5 LTR ERV1 -413 2025 743 2046 124 0 10 chr2 249643541 249643847 -3612736 - AluSx SINE Alu -9 303 1 558 247 144 21 chr2 249644349 249644543 -3612040 + MIR SINE MIR 45 262 0 221 289 276 13 chr2 249644668 249644969 -3611614 + L2 LINE L2 2301 2680 -634 286 311 63 37 chr2 249646096 249646483 -3610100 - L2 LINE L2 -265 3048 2558 2162 108 0 7 chr2 249647169 249647474 -3609109 - AluSx SINE Alu -9 303 1 209 291 110 116 chr2 249647775 249648004 -3608579 - L2 LINE L2 -23 3290 3062 1852 110 107 0 chr2 249648004 249648285 -3608298 - AluSx SINE Alu -1 311 1 209 291 110 116 chr2 249648285 249648436 -3608147 - L2 LINE L2 -251 3062 2912 886 173 6 12 chr2 249648672 249648834 -3607749 - FAM SINE Alu -10 165 5 2106 86 7 0 chr2 249650418 249650735 -3605848 - AluSg SINE Alu 0 319 1 234 224 59 35 chr2 249650760 249650845 -3605738 + L1ME LINE L1 5641 5727 -394 956 244 44 7 chr2 249650882 249651157 -3605426 - Charlie1b DNA MER1_type -199 324 40 464 284 194 25 chr2 249651252 249651507 -3605076 - L2 LINE L2 -602 2712 2405 2730 94 6 3 chr2 249651507 249651870 -3604713 - THE1B LTR MaLR 0 364 1 464 284 194 25 chr2 249651870 249651892 -3604691 - L2 LINE L2 -909 2405 2388 228 235 0 71 chr2 249652087 249652172 -3604411 + Charlie7 DNA MER1_type 2534 2612 0 1783 168 0 0 chr2 249653029 249653320 -3603263 + AluJo SINE Alu 1 291 -21 607 266 84 33 chr2 249653507 249653721 -3602862 - L1MC/D LINE L1 -2054 6252 6028 22 35 0 0 chr2 249653751 249653780 -3602803 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr2 249653815 249653847 -3602736 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr2 249655061 249655089 -3601494 + AT_rich Low_complexity Low_complexity 1 28 0 1865 131 21 3 chr2 249655156 249655447 -3601136 + AluSx SINE Alu 1 296 -16 210 37 0 0 chr2 249655708 249655735 -3600848 + (TTTAG)n Simple_repeat Simple_repeat 3 29 0 1978 105 11 3 chr2 249655735 249656020 -3600563 - AluSq SINE Alu -26 287 1 4519 219 57 26 chr2 249656020 249657116 -3599467 - L1MC/D LINE L1 -1867 4777 3716 971 54 78 0 chr2 249657116 249657245 -3599338 + MER85 DNA T2_type 1 139 0 4519 219 57 26 chr2 249657245 249657337 -3599246 - L1MC/D LINE L1 -2928 3716 3628 1813 166 17 0 chr2 249657337 249657626 -3598957 - AluSx SINE Alu -16 296 3 4519 219 57 26 chr2 249657626 249657808 -3598775 - L1MC/D LINE L1 -3016 3628 3364 1287 30 0 37 chr2 249657808 249657972 -3598611 + SVA Other Other 1229 1386 0 1937 223 34 54 chr2 249657976 249658625 -3597958 - L1MC/D LINE L1 -3270 3374 2739 3339 136 87 4 chr2 249658625 249659168 -3597415 + LTR69 LTR ERVL 1 588 0 2153 105 0 7 chr2 249659185 249659490 -3597093 - AluSx SINE Alu -9 303 1 542 287 47 30 chr2 249659495 249659899 -3596684 - L1MC/D LINE L1 -3940 2706 2296 2061 134 0 0 chr2 249659930 249660229 -3596354 - AluSx SINE Alu -13 299 1 1674 177 23 0 chr2 249660259 249660604 -3595979 - AluJb SINE Alu 0 352 1 1446 255 20 23 chr2 249660921 249661456 -3595127 - L1MC/D LINE L1 -4833 1709 1217 244 167 0 0 chr2 249662205 249662247 -3594336 - Alu SINE Alu -12 290 249 526 157 167 0 chr2 249662247 249662349 -3594234 - AluJo/FLAM SINE Alu -192 120 2 198 301 82 14 chr2 249664393 249664466 -3592117 + L2 LINE L2 3193 3270 -2 4131 209 65 33 chr2 249665069 249665546 -3591037 + L1MDa LINE L1 173 634 -5906 2134 119 10 0 chr2 249665546 249665848 -3590735 + AluSx SINE Alu 1 305 -7 2238 92 0 3 chr2 249665848 249666150 -3590433 + AluSg SINE Alu 1 302 -8 4131 209 65 33 chr2 249666150 249666671 -3589912 + L1MDa LINE L1 634 1137 -5403 2009 90 17 30 chr2 249666671 249666972 -3589611 + AluY SINE Alu 1 297 -14 4131 209 65 33 chr2 249666972 249667662 -3588921 + L1MDa LINE L1 1137 2305 -4235 1736 149 17 10 chr2 249667668 249667963 -3588620 + AluJo SINE Alu 6 302 -10 2228 84 3 0 chr2 249667972 249668268 -3588315 + AluSp SINE Alu 1 297 -16 1165 181 0 19 chr2 249668277 249668492 -3588091 + AluJb SINE Alu 1 211 -101 1651 247 42 25 chr2 249668493 249669016 -3587567 + L1MDa LINE L1 3626 4157 -2383 390 289 83 15 chr2 249869098 249869255 -3387328 + L1MDa LINE L1 2417 2583 -3959 1901 123 0 4 chr2 249869559 249869836 -3386747 + AluSg SINE Alu 22 297 -13 519 300 90 40 chr2 249870735 249871593 -3384990 + L1MDa LINE L1 2629 3560 -2980 1469 195 11 17 chr2 249871593 249871880 -3384703 - AluJo SINE Alu -26 286 2 519 300 90 40 chr2 249871880 249872161 -3384422 + L1MDa LINE L1 3559 3825 -2715 494 289 97 10 chr2 249872179 249872477 -3384106 + L1MDa LINE L1 3989 4312 -2228 887 231 140 58 chr2 249872598 249873084 -3383499 + L1MC4 LINE L1 7512 8037 -5 365 259 81 63 chr2 249873110 249873284 -3383299 + L1MDa LINE L1 4470 4646 -1894 817 58 0 0 chr2 249873298 249873401 -3383182 + L1PA5 LINE L1 6052 6154 0 651 275 97 63 chr2 249873402 249874199 -3382384 + L1MDa LINE L1 4686 5509 -1031 3621 122 5 20 chr2 249874310 249874866 -3381717 - LTR14 LTR ERVK 0 548 1 238 326 71 65 chr2 249877512 249877696 -3378887 - L2 LINE L2 -1 3271 3087 189 267 62 5 chr2 249878423 249878542 -3378041 + MIR SINE MIR 80 206 -2 812 203 99 108 chr2 249880334 249880778 -3375805 - MLT1D LTR MaLR 0 505 66 526 239 15 0 chr2 249881314 249881444 -3375139 + MER94 DNA DNA 3 134 0 235 261 65 43 chr2 249881834 249881972 -3374611 + LTR33 LTR ERVL 327 467 -54 2161 184 35 16 chr2 249881990 249882414 -3374169 + MSTB1 LTR MaLR 1 432 0 450 288 44 12 chr2 249882802 249882962 -3373621 + MER97a DNA MER1_type? 15 179 -715 277 228 173 12 chr2 249883664 249883826 -3372757 + LTR33 LTR ERVL 329 516 -5 1561 279 100 24 chr2 249884149 249884897 -3371686 + HAL1 LINE L1 1569 2373 -134 448 115 0 0 chr2 249884913 249884974 -3371609 - AluS SINE Alu -248 62 2 2151 115 0 3 chr2 249885328 249885632 -3370951 - AluSx SINE Alu -9 303 1 400 302 106 74 chr2 249885691 249886068 -3370515 + HAL1b LINE L1 392 780 -568 340 325 59 72 chr2 249886181 249886556 -3370027 + L1ME4a LINE L1 5737 6106 -15 891 222 30 0 chr2 249887859 249888062 -3368521 + L1MB5 LINE L1 5958 6166 -8 368 317 104 0 chr2 249888291 249888330 -3368253 - L1ME4a LINE L1 -3 6118 6084 3399 122 9 61 chr2 249888330 249888886 -3367697 - MER1A DNA MER1_type 0 527 1 368 317 104 0 chr2 249888886 249889010 -3367573 - L1ME4a LINE L1 -37 6084 5938 207 0 0 0 chr2 249890251 249890274 -3366309 + (CAAT)n Simple_repeat Simple_repeat 2 24 0 2217 199 112 2 chr2 249890341 249890804 -3365779 + MER44D DNA MER2_type 1 569 -36 2102 108 3 0 chr2 249891355 249891650 -3364933 - AluSx SINE Alu -16 296 1 245 315 97 12 chr2 249891782 249891947 -3364636 + LTR41 LTR ERVL 584 762 -11 24 0 0 0 chr2 249891997 249892021 -3364562 + AT_rich Low_complexity Low_complexity 1 24 0 223 293 226 0 chr2 249892326 249892432 -3364151 - MIR SINE MIR -85 177 48 2237 87 0 13 chr2 249893751 249894062 -3362521 + AluSq SINE Alu 1 307 -6 2362 52 7 13 chr2 249895729 249896037 -3360546 - AluY SINE Alu -5 306 1 545 245 84 32 chr2 249896177 249896535 -3360048 - MLT1E LTR MaLR -15 578 1 234 375 35 0 chr2 249896626 249896770 -3359813 - MIR3 SINE MIR -2 206 58 1411 82 0 0 chr2 249898287 249898471 -3358112 + L1PA14 LINE L1 5977 6160 -1 294 123 37 55 chr2 249900540 249900703 -3355880 + (CA)n Simple_repeat Simple_repeat 1 160 0 236 379 98 11 chr2 249901929 249902103 -3354480 - MIR SINE MIR -72 190 2 1654 179 0 13 chr2 249902514 249902838 -3353745 + AluSx SINE Alu 1 312 0 373 210 101 29 chr2 249903218 249903356 -3353227 + MER103 DNA DNA 12 159 -7 1967 130 3 7 chr2 249903793 249904093 -3352490 - AluSq SINE Alu -12 301 3 194 277 72 0 chr2 249904509 249904592 -3351991 - MIR SINE MIR -17 245 157 254 301 85 23 chr2 249905217 249905393 -3351190 - MIR3 SINE MIR 0 208 22 1006 173 27 32 chr2 249905792 249905848 -3350735 - MER58A DNA MER1_type -2207 213 158 1930 174 107 57 chr2 249905848 249905890 -3350693 - MLT2B1 LTR ERVL 0 520 482 549 80 0 0 chr2 249905890 249905965 -3350618 + (CA)n Simple_repeat Simple_repeat 2 76 0 1930 174 107 57 chr2 249905965 249906417 -3350166 - MLT2B1 LTR ERVL -38 482 1 1006 173 27 32 chr2 249906417 249906545 -3350038 - MER58A DNA MER1_type -2262 158 30 673 120 0 0 chr2 249907109 249907201 -3349382 + AluS SINE Alu 3 94 -219 252 286 87 16 chr2 249907374 249907559 -3349024 + HAL1b LINE L1 392 589 -759 1974 126 0 0 chr2 249907732 249908026 -3348557 + AluJb SINE Alu 1 294 -18 1973 130 3 3 chr2 249908371 249908670 -3347913 + AluSx SINE Alu 1 299 -13 5249 109 31 15 chr2 249908715 249909523 -3347060 - L1PA16 LINE L1 -9 6157 5337 259 148 0 74 chr2 249909523 249909577 -3347006 + U2 snRNA snRNA 1 50 -138 11240 210 26 13 chr2 249909578 249909635 -3346948 - L1 LINE L1 -816 5330 5275 1780 146 118 43 chr2 249909635 249910032 -3346551 + MSTA LTR MaLR 2 428 0 11240 210 26 13 chr2 249910032 249912647 -3343936 - L1 LINE L1 -871 5275 2623 24 32 0 0 chr2 249912946 249912977 -3343606 + AT_rich Low_complexity Low_complexity 1 31 0 708 312 74 75 chr2 249913024 249913209 -3343374 + L1M4 LINE L1 2368 2552 -3594 2107 113 0 0 chr2 249913209 249913501 -3343082 + AluSx SINE Alu 20 311 -1 708 312 74 75 chr2 249913501 249913966 -3342617 + L1M4 LINE L1 2552 3017 -3129 294 365 0 0 chr2 249913997 249914101 -3342482 - MIR SINE MIR -2 260 157 334 228 59 0 chr2 249914258 249914359 -3342224 + L1P LINE L1 3181 3287 -2859 2078 119 0 13 chr2 249914516 249914819 -3341764 + AluSg SINE Alu 2 300 -10 2361 107 48 22 chr2 249915222 249915577 -3341006 + THE1B LTR MaLR 1 364 0 21 36 0 0 chr2 249915812 249915840 -3340743 + AT_rich Low_complexity Low_complexity 1 28 0 413 301 71 13 chr2 249915893 249916119 -3340464 + L1M4 LINE L1 3709 3947 -2199 840 108 85 57 chr2 249916387 249916508 -3340075 + MER53 DNA DNA 1 130 -59 2215 89 0 0 chr2 249916508 249916799 -3339784 + AluSg SINE Alu 3 293 -17 840 108 85 57 chr2 249916799 249916853 -3339730 + MER53 DNA DNA 130 181 -8 314 326 46 14 chr2 249917444 249917662 -3338921 + L1M4 LINE L1 4023 4247 -1899 263 256 128 47 chr2 249918830 249918916 -3337667 - L2 LINE L2 0 3272 3180 590 232 35 0 chr2 249918924 249919369 -3337214 + (TGGA)n Simple_repeat Simple_repeat 1 460 0 498 201 28 22 chr2 249919387 249919566 -3337017 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 286 310 26 45 chr2 249919754 249919909 -3336674 - L2 LINE L2 -243 3070 2919 347 333 31 0 chr2 249920236 249920332 -3336251 + L1MC4 LINE L1 6603 6701 -1341 2293 98 10 7 chr2 249920333 249920640 -3335943 - AluSc SINE Alu -1 308 1 26 30 0 0 chr2 249920712 249920745 -3335838 + AT_rich Low_complexity Low_complexity 1 33 0 240 219 167 44 chr2 249920770 249920884 -3335699 + L1ME4a LINE L1 5994 6121 0 535 311 95 32 chr2 249921328 249922012 -3334571 - L1MEd LINE L1 -2346 3783 3057 2588 87 19 11 chr2 249922016 249922382 -3334201 - L1PB1 LINE L1 -1 6150 5782 321 356 0 0 chr2 249922387 249922477 -3334106 + L1MC4 LINE L1 6614 6703 -1339 * 334 344 0 0 chr2 249922397 249922487 -3334096 - L1MC4 LINE L1 -1339 6703 6614 5690 169 14 2 chr2 249922516 249924152 -3332431 - L1P5 LINE L1 -360 5791 4134 13639 158 109 8 chr2 249924208 249927987 -3328596 - L1PBa LINE L1 -2687 4175 11 699 301 67 14 chr2 249928006 249928424 -3328159 - L1MEd LINE L1 -3085 3044 2605 425 319 43 24 chr2 249928454 249928874 -3327709 - L1MEd LINE L1 -3609 2520 2093 1002 237 0 9 chr2 249928930 249929149 -3327434 + MER58A DNA MER1_type 1 217 -7 2052 272 85 63 chr2 249929654 249931132 -3325451 - L1MEd LINE L1 -4754 1556 4 270 0 0 0 chr2 249933052 249933082 -3323501 + (A)n Simple_repeat Simple_repeat 1 30 0 334 326 63 21 chr2 249935475 249935665 -3320918 - MIR SINE MIR -22 240 43 207 100 0 0 chr2 249936282 249936312 -3320271 + (A)n Simple_repeat Simple_repeat 1 30 0 22 0 0 0 chr2 249937343 249937365 -3319218 + AT_rich Low_complexity Low_complexity 1 22 0 218 299 28 20 chr2 249937763 249937910 -3318673 + MIR3 SINE MIR 10 153 -63 390 311 109 46 chr2 249938675 249939041 -3317542 - MLT1J2 LTR MaLR -61 389 1 906 211 58 29 chr2 249939048 249939323 -3317260 - MER66A LTR ERV1 -10 468 186 1823 26 0 18 chr2 249939323 249939552 -3317031 - L1P3 LINE L1 -403 5769 5545 201 305 21 70 chr2 249939650 249939837 -3316746 - L2 LINE L2 -241 3031 2854 749 268 16 16 chr2 249940016 249940210 -3316373 + MIR SINE MIR 17 210 -52 2153 126 0 14 chr2 249940523 249940817 -3315766 + AluSx SINE Alu 1 290 -22 1234 208 13 8 chr2 249940838 249941074 -3315509 - AluJb SINE Alu -5 307 71 27 0 0 0 chr2 249941136 249941163 -3315420 + AT_rich Low_complexity Low_complexity 1 27 0 2271 74 3 80 chr2 249941223 249941562 -3315021 + AluSp SINE Alu 1 313 0 22 0 0 0 chr2 249941777 249941799 -3314784 + AT_rich Low_complexity Low_complexity 1 22 0 251 203 16 62 chr2 249942033 249942097 -3314486 - MIR SINE MIR -109 153 93 837 220 78 91 chr2 249944182 249944692 -3311891 + MLT1D LTR MaLR 1 372 -2 305 326 167 16 chr2 249945074 249945319 -3311264 + L2 LINE L2 3006 3287 -26 374 205 24 0 chr2 249945399 249945482 -3311101 + LTR16C LTR ERVL 96 180 -311 4404 162 44 56 chr2 249947254 249947440 -3309143 + L1MCa LINE L1 1 188 -6238 1388 37 0 0 chr2 249947440 249947603 -3308980 + L1PA7 LINE L1 5988 6150 -4 4404 162 44 56 chr2 249947603 249948403 -3308180 + L1MCa LINE L1 188 975 -5451 1975 241 9 76 chr2 249948380 249949024 -3307559 + L1M4 LINE L1 3533 4133 -2293 * 2366 143 15 23 chr2 249949028 249949402 -3307181 + L1MC/D LINE L1 5191 5562 -782 2192 115 40 37 chr2 249949402 249949776 -3306807 + THE1C LTR MaLR 1 375 0 2366 143 15 23 chr2 249949776 249949876 -3306707 + L1MC/D LINE L1 5562 5661 -683 567 221 92 72 chr2 249949876 249950278 -3306305 + MLT1D LTR MaLR 27 467 0 1474 262 120 11 chr2 249950478 249951111 -3305472 - L1ME2 LINE L1 -10 6154 5453 217 334 38 110 chr2 249951297 249951614 -3304969 - L2 LINE L2 -85 3187 2894 379 331 103 36 chr2 249952736 249953038 -3303545 + L2 LINE L2 2890 3211 -102 341 311 12 36 chr2 249953246 249953350 -3303233 - L1ME LINE L1 -379 5742 5642 2267 108 3 0 chr2 249953350 249953657 -3302926 + AluSg1 SINE Alu 1 308 -1 341 311 12 36 chr2 249953657 249953719 -3302864 - L1ME LINE L1 -479 5642 5580 182 213 82 33 chr2 249953729 249953790 -3302793 + MIR SINE MIR 32 95 -113 377 330 32 32 chr2 249954216 249954404 -3302179 - L2 LINE L2 -630 2684 2497 785 242 223 31 chr2 249954405 249954460 -3302123 + MLT1H1 LTR MaLR 1 44 -511 2407 166 31 10 chr2 249954460 249954877 -3301706 + MSTB LTR MaLR 1 426 0 785 242 223 31 chr2 249954877 249955242 -3301341 + MLT1H1 LTR MaLR 44 502 -53 238 226 0 0 chr2 249955445 249955498 -3301085 + MLT1F LTR MaLR 1 53 -502 646 188 138 69 chr2 249955501 249955777 -3300806 + MLT1F LTR MaLR 239 533 -9 1607 276 88 20 chr2 249955789 249956502 -3300081 - L2 LINE L2 -826 2488 1727 287 301 208 27 chr2 249956762 249957125 -3299458 - L2 LINE L2 -1547 1767 1321 2059 129 20 0 chr2 249957125 249957419 -3299164 + AluSx SINE Alu 1 300 -12 287 301 208 27 chr2 249957419 249957464 -3299119 - L2 LINE L2 -1993 1321 1285 305 194 15 15 chr2 249959454 249959521 -3297062 + MLT1I LTR MaLR 343 409 0 849 241 17 42 chr2 249959669 249959906 -3296677 - MIR SINE MIR -31 231 1 426 220 10 0 chr2 249960281 249960381 -3296202 + LTR43 LTR ERV1 187 287 -315 2141 129 7 3 chr2 249961204 249961507 -3295076 - AluJb SINE Alu -8 304 1 257 299 75 0 chr2 249961599 249961706 -3294877 - MIR SINE MIR -78 130 16 738 253 193 26 chr2 249962034 249962422 -3294161 - MLT1C LTR MaLR -52 453 1 367 352 60 6 chr2 249963682 249963864 -3292719 - MIR SINE MIR -70 192 1 4255 134 30 65 chr2 249964583 249965397 -3291186 - LTR1 LTR ERV1 0 785 1 341 242 0 34 chr2 249966855 249966946 -3289637 - L1ME3A LINE L1 -12 6158 6071 435 294 89 0 chr2 249967177 249967323 -3289260 + MER5B DNA MER1_type 17 175 -3 1997 170 45 24 chr2 249967471 249967853 -3288730 - MLT1B LTR MaLR 0 390 1 239 314 51 51 chr2 249969682 249969918 -3286665 + L1MC/D LINE L1 4861 5096 -1050 698 241 75 18 chr2 249969927 249970250 -3286333 - MSTC LTR MaLR 0 428 14 236 194 42 14 chr2 249970554 249970626 -3285957 + L1ME4a LINE L1 6046 6119 -2 * 450 298 118 13 chr2 249970621 249970859 -3285724 + L1ME3A LINE L1 5895 6157 -13 325 333 0 0 chr2 249970889 249970979 -3285604 + L1MC4 LINE L1 6614 6703 -1339 498 17 0 0 chr2 249970981 249971040 -3285543 + (GA)n Simple_repeat Simple_repeat 2 60 0 871 81 0 0 chr2 249971040 249971151 -3285432 - AluSc SINE Alu -34 275 165 407 304 91 44 chr2 249971189 249971528 -3285055 + L1MC/D LINE L1 5255 5609 -750 187 333 43 8 chr2 249971741 249971858 -3284725 + L2 LINE L2 2605 2725 -589 544 306 6 17 chr2 249972606 249972786 -3283797 + MER45A DNA AcHobo 1 178 0 1474 180 69 0 chr2 249974719 249975069 -3281514 - LTR1 LTR ERV1 -6 779 406 806 183 0 0 chr2 249975556 249975687 -3280896 + FLAM_C SINE Alu 2 132 -1 4040 89 14 5 chr2 249975707 249976802 -3279781 + L1PA4 LINE L1 4844 5946 -209 235 349 53 5 chr2 249977377 249977566 -3279017 - MIR3 SINE MIR -7 201 4 363 221 8 118 chr2 249977865 249977992 -3278591 + MER81 DNA DNA 2 114 0 258 233 56 33 chr2 249978731 249978821 -3277762 - LTR33 LTR ERVL -126 395 304 355 237 64 51 chr2 249979076 249979232 -3277351 - LTR16A LTR ERVL -292 158 1 382 227 158 30 chr2 249979305 249979508 -3277075 - LTR33 LTR ERVL -291 230 2 447 236 12 16 chr2 249979715 249979960 -3276623 + (CA)n Simple_repeat Simple_repeat 1 244 0 672 306 82 74 chr2 249979979 249980654 -3275929 - L1M4 LINE L1 -2644 3502 2748 603 247 67 21 chr2 249981033 249981338 -3275245 + MLT1A1 LTR MaLR 5 365 0 2202 83 17 0 chr2 249981897 249982186 -3274397 - AluSg1 SINE Alu -15 294 1 465 346 104 13 chr2 249982205 249982514 -3274069 - L1M4 LINE L1 -3678 2468 2132 1529 161 0 11 chr2 249982756 249983016 -3273567 - AluJo SINE Alu -55 257 1 226 324 27 101 chr2 249983219 249983367 -3273216 - L2 LINE L2 -3 3269 3133 1889 179 22 25 chr2 249983393 249983751 -3272832 - MLT1A1 LTR MaLR 0 365 9 357 280 42 42 chr2 249983863 249984031 -3272552 - HAL1b LINE L1 -572 776 609 814 109 20 30 chr2 250002971 250003015 -3253568 - THE1C LTR MaLR -265 110 67 2457 139 16 3 chr2 250003015 250003383 -3253200 + THE1C LTR MaLR 1 373 -2 814 109 20 30 chr2 250003383 250003494 -3253089 - THE1C LTR MaLR -308 67 1 10320 118 27 33 chr2 250003494 250005083 -3251500 - MSTA-int LTR MaLR 0 1580 1 2003 139 177 14 chr2 250005083 250005451 -3251132 - MSTA LTR MaLR 0 428 1 197 281 98 0 chr2 250005547 250005629 -3250954 + MIR3 SINE MIR 112 201 -7 210 245 0 20 chr2 250005957 250006006 -3250577 + GA-rich Low_complexity Low_complexity 4 51 0 1550 178 7 21 chr2 250007098 250007385 -3249198 - AluJb SINE Alu -20 292 10 192 40 0 0 chr2 250007521 250007546 -3249037 + (TC)n Simple_repeat Simple_repeat 2 26 0 521 297 95 14 chr2 250008155 250008377 -3248206 + MLT1I LTR MaLR 102 341 -68 351 331 21 14 chr2 250008426 250008571 -3248012 - L1M4 LINE L1 -1033 5113 4968 2028 128 0 25 chr2 250009182 250009501 -3247082 + AluY SINE Alu 1 311 0 831 150 0 50 chr2 250009888 250010028 -3246555 - FLAM_C SINE Alu 0 133 1 210 328 26 4 chr2 250011289 250011386 -3245197 + MIR SINE MIR 20 119 -109 203 204 0 23 chr2 250012753 250012797 -3243786 + MIR SINE MIR 18 60 -148 240 338 69 15 chr2 250013140 250013344 -3243239 - L2 LINE L2 -218 3054 2840 875 105 29 17 chr2 250014410 250014582 -3242001 + (CACCAT)n Simple_repeat Simple_repeat 6 179 0 256 306 0 0 chr2 250014609 250014671 -3241912 - L3 LINE CR1 -125 1452 1391 207 0 0 0 chr2 250014690 250014713 -3241870 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 363 176 74 65 chr2 250014740 250014848 -3241735 - MSTB2 LTR MaLR -5 452 344 269 334 13 3 chr2 250014967 250015077 -3241506 + MIR SINE MIR 23 132 -76 223 177 0 25 chr2 250017327 250017406 -3239177 + (TA)n Simple_repeat Simple_repeat 2 78 0 221 277 158 0 chr2 250017408 250017509 -3239074 - MIR SINE MIR -50 212 96 609 207 53 13 chr2 250017546 250017696 -3238887 - MLT1H1 LTR MaLR 0 590 435 354 23 0 0 chr2 250018145 250018188 -3238395 + (TC)n Simple_repeat Simple_repeat 1 43 0 903 251 24 65 chr2 250018188 250018488 -3238095 - MLT1H1 LTR MaLR -297 293 3 4483 211 18 35 chr2 250018562 250019791 -3236792 + L1MB8 LINE L1 2859 4066 -2080 1083 170 16 9 chr2 250019797 250020113 -3236470 + L1MB8 LINE L1 5147 5465 -709 1424 190 8 0 chr2 250020120 250020378 -3236205 + L1MB8 LINE L1 5738 5997 -187 5615 70 29 3 chr2 250020419 250021172 -3235411 - LTR17 LTR ERV1 -7 773 1 327 155 13 187 chr2 250021180 250021270 -3235313 + L1MB8 LINE L1 6046 6100 -78 1802 170 82 18 chr2 250021270 250021611 -3234972 - MLT1A1 LTR MaLR -2 363 1 327 155 13 187 chr2 250021611 250021675 -3234908 + L1MB8 LINE L1 6100 6173 -5 360 236 8 15 chr2 250021684 250021784 -3234799 - MLT1H1 LTR MaLR -471 84 1 2302 116 0 0 chr2 250021862 250022172 -3234411 + AluSq SINE Alu 2 311 -2 943 180 120 5 chr2 250022195 250022395 -3234188 + MER58A DNA MER1_type 2 224 0 272 246 126 37 chr2 250022857 250023075 -3233508 - MLT1D LTR MaLR -163 304 64 189 206 22 109 chr2 250025004 250025096 -3231487 + MIR SINE MIR 63 146 -116 304 322 133 3 chr2 250025230 250025547 -3231036 + HAL1 LINE L1 11 368 -2139 797 142 124 18 chr2 250025828 250025997 -3230586 - MER53 DNA DNA 0 189 3 273 29 0 0 chr2 250026005 250026039 -3230544 + (CA)n Simple_repeat Simple_repeat 1 34 0 250 262 24 56 chr2 250026052 250026178 -3230405 + HAL1 LINE L1 807 928 -1579 1098 276 149 22 chr2 250026239 250026394 -3230189 + HAL1 LINE L1 1379 1513 -994 2107 118 0 33 chr2 250026394 250026699 -3229884 + AluSg SINE Alu 1 295 -15 1098 276 149 22 chr2 250026699 250027281 -3229302 + HAL1 LINE L1 1513 2210 -297 273 98 0 0 chr2 250027281 250027322 -3229261 + (TG)n Simple_repeat Simple_repeat 2 42 0 217 177 0 32 chr2 250027323 250027342 -3229241 + GA-rich Low_complexity Low_complexity 2 20 -41 2291 102 0 13 chr2 250027342 250027646 -3228937 + AluSq SINE Alu 1 300 -13 217 177 0 32 chr2 250027646 250027688 -3228895 + GA-rich Low_complexity Low_complexity 20 61 0 360 299 22 0 chr2 250027736 250027870 -3228713 + HAL1 LINE L1 2271 2407 -100 786 219 73 0 chr2 250028260 250028452 -3228131 - MLT1D LTR MaLR -6 499 294 314 146 0 0 chr2 250028450 250028505 -3228078 - MLT1D LTR MaLR -367 138 84 * 1710 217 8 19 chr2 250028505 250028874 -3227709 + MLT1A1 LTR MaLR 1 365 0 1520 116 116 44 chr2 250028874 250029167 -3227416 + MER1B DNA MER1_type 3 316 -23 289 217 60 24 chr2 250029190 250029273 -3227310 - MLT1D LTR MaLR -419 86 1 371 244 92 10 chr2 250029284 250029512 -3227071 + MLT1D LTR MaLR 212 498 -7 699 193 37 6 chr2 250031286 250031447 -3225136 + MER45 DNA AcHobo 1 166 -787 2149 125 10 3 chr2 250031923 250032219 -3224364 - AluSx SINE Alu -14 298 1 392 239 12 0 chr2 250032264 250032356 -3224227 + MIR SINE MIR 63 156 -52 419 221 8 0 chr2 250032473 250032595 -3223988 + (CA)n Simple_repeat Simple_repeat 1 123 0 771 217 4 0 chr2 250032614 250032897 -3223686 + (CA)n Simple_repeat Simple_repeat 1 284 0 233 208 21 0 chr2 250033658 250033706 -3222877 - MIR SINE MIR -59 149 101 2919 10 0 0 chr2 250033941 250034252 -3222331 - AluYa5 SINE Alu 0 311 1 2469 65 10 0 chr2 250035276 250035569 -3221014 + AluSg SINE Alu 1 296 -14 240 234 16 0 chr2 250036284 250036348 -3220235 + Charlie5 DNA MER1_type 2501 2565 -47 213 285 134 21 chr2 250036813 250036999 -3219584 + L2 LINE L2 3035 3241 -72 2188 167 53 34 chr2 250038259 250038405 -3218178 + MER65A LTR ERV1 2 144 -301 2271 110 7 3 chr2 250038405 250038706 -3217877 + AluSx SINE Alu 1 302 -10 2188 167 53 34 chr2 250038706 250038995 -3217588 + MER65A LTR ERV1 144 445 0 320 355 9 0 chr2 250039545 250039655 -3216928 - MIR3 SINE MIR -53 155 45 4789 198 65 47 chr2 250041132 250041236 -3215347 + L1MDa LINE L1 25 126 -6414 1814 163 10 13 chr2 250041236 250041543 -3215040 + AluJo SINE Alu 5 310 -2 4789 198 65 47 chr2 250041543 250043263 -3213320 + L1MDa LINE L1 126 2281 -4259 1816 161 10 30 chr2 250044133 250044437 -3212146 + AluJo SINE Alu 1 298 -14 1089 185 13 40 chr2 250044597 250044838 -3211745 + MER77 LTR ERV1 396 680 -6 189 74 0 0 chr2 250046097 250046124 -3210459 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 664 234 79 25 chr2 250047174 250047591 -3208992 - MLT1C LTR MaLR 0 467 7 519 42 52 74 chr2 250047940 250048260 -3208323 + (TG)n Simple_repeat Simple_repeat 1 312 0 414 76 59 61 chr2 250048301 250048800 -3207783 + (TG)n Simple_repeat Simple_repeat 1 498 0 304 71 49 77 chr2 250048866 250049049 -3207534 + (TG)n Simple_repeat Simple_repeat 2 179 0 340 61 50 77 chr2 250049115 250049296 -3207287 + (TG)n Simple_repeat Simple_repeat 2 177 0 473 79 67 52 chr2 250049392 250050005 -3206578 + (TG)n Simple_repeat Simple_repeat 1 622 0 1150 219 42 72 chr2 250050167 250050569 -3206014 - MLT1B LTR MaLR 0 390 1 1140 94 0 24 chr2 250050635 250050805 -3205778 + MER30B DNA MER1_type 4 169 -21 23 33 0 0 chr2 250050917 250050947 -3205636 + AT_rich Low_complexity Low_complexity 1 30 0 195 83 42 21 chr2 250051123 250051171 -3205412 + (CA)n Simple_repeat Simple_repeat 1 49 0 378 357 41 15 chr2 250051602 250051944 -3204639 - Charlie8 DNA MER1_type -855 1562 1212 462 241 17 26 chr2 250053172 250053288 -3203295 + MIR SINE MIR 66 180 -82 2548 69 0 7 chr2 250053453 250053759 -3202824 + AluY SINE Alu 1 304 -7 258 265 60 8 chr2 250054260 250054377 -3202206 + L1ME LINE L1 573 695 -5424 915 276 64 0 chr2 250054424 250054754 -3201829 + L1ME3 LINE L1 5731 6081 -81 475 261 28 78 chr2 250054860 250055040 -3201543 + L1ME LINE L1 917 1087 -5032 1108 246 41 43 chr2 250055072 250055313 -3201270 + L1ME LINE L1 2114 2354 -3775 1523 127 13 9 chr2 250055313 250055541 -3201042 + AluSg/x SINE Alu 81 309 -1 1108 246 41 43 chr2 250055541 250055790 -3200793 + L1ME LINE L1 2354 2603 -3526 725 208 112 69 chr2 250055795 250056170 -3200413 + L1ME LINE L1 2728 3118 -3011 426 287 8 8 chr2 250056250 250056379 -3200204 + MLT1-int LTR MaLR 756 884 -487 623 229 4 114 chr2 250056525 250056761 -3199822 + MLT1-int LTR MaLR 991 1200 -171 2241 139 58 3 chr2 250056855 250057201 -3199382 - MLT1A1 LTR MaLR 0 365 1 2298 124 0 0 chr2 250057325 250057631 -3198952 + AluSx SINE Alu 1 306 -6 540 312 173 34 chr2 250057678 250057918 -3198665 + L2 LINE L2 2253 2458 -814 2468 54 40 3 chr2 250057918 250058214 -3198369 - AluY SINE Alu -4 307 1 540 312 173 34 chr2 250058214 250058673 -3197910 + L2 LINE L2 2458 3050 -222 270 161 81 32 chr2 250058752 250058814 -3197769 + L2 LINE L2 3208 3272 0 182 342 66 0 chr2 250058814 250058890 -3197693 - MIR SINE MIR -70 192 112 351 349 32 28 chr2 250060088 250060337 -3196246 + L1M2a LINE L1 405 654 -6912 * 4426 229 33 18 chr2 250060335 250061705 -3194878 + L1M2a LINE L1 2097 3395 -4171 584 165 0 0 chr2 250061711 250061796 -3194787 + AluJ/FLAM SINE Alu 6 90 -222 * 731 161 42 0 chr2 250061795 250061913 -3194670 + FLAM_A SINE Alu 7 129 -13 2932 204 33 28 chr2 250061924 250062934 -3193649 + L1M2a LINE L1 3344 4354 -3211 1363 162 85 8 chr2 250062935 250063170 -3193413 + AluJo SINE Alu 47 299 -13 4567 191 28 37 chr2 250063177 250064266 -3192317 + L1M2a LINE L1 4335 5349 -2216 215 79 26 0 chr2 250064266 250064304 -3192279 + (TA)n Simple_repeat Simple_repeat 1 39 0 4567 191 28 37 chr2 250064304 250064547 -3192036 + L1M2a LINE L1 5349 5593 -1972 4127 197 82 57 chr2 250064667 250065107 -3191476 + L1MDa LINE L1 482 910 -5630 252 70 0 23 chr2 250065107 250065150 -3191433 + (TTTA)n Simple_repeat Simple_repeat 3 148 0 1962 117 0 41 chr2 250065150 250065441 -3191142 - AluSc SINE Alu -1 321 1 711 144 68 0 chr2 250065448 250065594 -3190989 - L1MA5A LINE L1 0 6297 6142 4127 197 82 57 chr2 250065594 250066165 -3190418 + L1MDa LINE L1 915 1470 -5070 2407 78 30 0 chr2 250066165 250066460 -3190123 + AluSp SINE Alu 1 304 -9 4127 197 82 57 chr2 250066460 250066805 -3189778 + L1MDa LINE L1 1470 2106 -4434 342 105 444 8 chr2 250067100 250067224 -3189359 + MER53 DNA DNA 3 180 -9 1250 172 73 97 chr2 250067298 250067442 -3189141 + MLT1A1 LTR MaLR 3 149 -216 1523 170 16 56 chr2 250067442 250067748 -3188835 + AluJb SINE Alu 1 294 -18 1250 172 73 97 chr2 250067748 250067975 -3188608 + MLT1A1 LTR MaLR 149 365 0 231 246 14 14 chr2 250070070 250070139 -3186444 + MER104 DNA Tc2 33 101 -79 342 361 41 9 chr2 250070189 250070408 -3186175 - MIR SINE MIR -32 230 5 4381 194 16 17 chr2 250070585 250071077 -3185506 + L1MB7 LINE L1 4353 4844 -1340 2313 117 7 0 chr2 250071077 250071384 -3185199 - AluSx SINE Alu -3 309 1 4381 194 16 17 chr2 250071384 250072715 -3183868 + L1MB7 LINE L1 4844 6169 -15 1961 161 0 23 chr2 250072771 250073081 -3183502 + AluJo SINE Alu 3 305 -7 244 409 27 0 chr2 250073289 250073399 -3183184 + L2 LINE L2 2646 2758 -556 469 267 48 67 chr2 250073416 250073499 -3183084 - MER5B DNA MER1_type -16 162 82 1691 210 54 36 chr2 250073499 250073995 -3182588 + MLT1D LTR MaLR 1 505 0 469 267 48 67 chr2 250073995 250074076 -3182507 - MER5B DNA MER1_type -96 82 1 2163 124 24 0 chr2 250074713 250075004 -3181579 + AluSx SINE Alu 1 298 -14 1099 347 63 29 chr2 250075116 250075802 -3180781 + ERVL LTR ERVL 1164 1872 -3892 391 200 10 40 chr2 250075878 250075978 -3180605 + LTR41 LTR ERVL 91 187 -586 6275 166 70 9 chr2 250077925 250079157 -3177426 - L1M1 LINE L1 -4065 1263 240 1788 120 91 26 chr2 250079157 250079508 -3177075 + THE1C LTR MaLR 1 374 -1 6275 166 70 9 chr2 250079508 250079762 -3176821 - L1M1 LINE L1 -5088 240 3 1121 264 196 63 chr2 250080463 250081002 -3175581 - HAL1 LINE L1 -205 2302 1836 1801 163 44 0 chr2 250081002 250081296 -3175287 + AluJb SINE Alu 1 307 -5 1121 264 196 63 chr2 250081296 250081645 -3174938 - HAL1 LINE L1 -671 1836 1296 325 167 13 64 chr2 250081992 250082070 -3174513 - HAL1 LINE L1 -1804 703 630 829 287 152 14 chr2 250082118 250082480 -3174103 - HAL1 LINE L1 -2059 448 37 597 248 22 0 chr2 250082482 250082619 -3173964 - MLT1J LTR MaLR -371 140 1 180 0 0 0 chr2 250085335 250085355 -3171228 + (TAAA)n Simple_repeat Simple_repeat 4 23 0 1787 162 11 0 chr2 250089726 250089997 -3166586 + AluJb SINE Alu 9 282 -30 1741 302 96 42 chr2 250090920 250092584 -3163999 + L1MC4 LINE L1 3589 4863 -1283 2262 86 35 0 chr2 250092584 250092874 -3163709 + AluSx SINE Alu 1 300 -12 1741 302 96 42 chr2 250092874 250093446 -3163137 + L1MC4 LINE L1 4863 5403 -743 2214 131 6 10 chr2 250093561 250093874 -3162709 + AluSx SINE Alu 1 312 0 1876 242 110 2 chr2 250094529 250095067 -3161516 + L1MC4 LINE L1 6494 7089 -953 813 257 50 4 chr2 250095067 250095328 -3161255 + L1MC4a LINE L1 7158 7430 -378 2502 63 0 3 chr2 250096496 250096796 -3159787 + AluY SINE Alu 1 299 -12 2276 103 0 3 chr2 250097466 250097767 -3158816 + AluSc SINE Alu 1 300 -9 1016 181 16 0 chr2 250098319 250098507 -3158076 + AluJo SINE Alu 120 310 -2 491 301 57 53 chr2 250098684 250098946 -3157637 + L1M4 LINE L1 3029 3291 -2855 266 274 53 18 chr2 250101022 250101135 -3155448 - MIR SINE MIR -75 133 17 756 141 39 0 chr2 250101575 250101703 -3154880 + FLAM_A SINE Alu 1 133 0 2351 87 3 10 chr2 250101949 250102259 -3154324 + AluSc SINE Alu 1 308 -1 13117 128 67 11 chr2 250102904 250105042 -3151541 + Tigger1 DNA MER2_type 3 2278 -140 2442 66 0 23 chr2 250105042 250105345 -3151238 - AluY SINE Alu -15 296 1 13117 128 67 11 chr2 250105345 250105495 -3151088 + Tigger1 DNA MER2_type 2278 2418 0 214 188 116 43 chr2 250105673 250105742 -3150841 + MIR SINE MIR 17 90 -172 2056 101 7 27 chr2 250106398 250106696 -3149887 + AluSq SINE Alu 1 292 -21 263 259 93 46 chr2 250106879 250106987 -3149596 + L2 LINE L2 3200 3312 -1 22 80 0 0 chr2 250108314 250108364 -3148219 + GC_rich Low_complexity Low_complexity 1 50 0 422 198 0 11 chr2 250109150 250109241 -3147342 + L1M3 LINE L1 5733 5822 -349 * 1749 182 50 18 chr2 250109234 250109618 -3146965 + L1MB2 LINE L1 5769 6164 -7 271 258 54 0 chr2 250109638 250109731 -3146852 - MER5B DNA MER1_type -78 100 3 201 375 75 0 chr2 250110055 250110175 -3146408 - MIR SINE MIR -108 154 26 333 289 82 0 chr2 250110510 250110669 -3145914 + L1ME LINE L1 5557 5728 -393 201 292 115 0 chr2 250111206 250111302 -3145281 + MIR SINE MIR 77 183 -79 813 249 134 35 chr2 250112777 250113119 -3143464 + MLT1D LTR MaLR 12 387 -118 278 244 35 0 chr2 250114755 250114841 -3141742 + L1MEd LINE L1 107 195 -6010 727 226 0 0 chr2 250115120 250115253 -3141330 + FLAM_C SINE Alu 2 134 -9 4482 160 25 13 chr2 250115253 250116092 -3140491 + L1MB2 LINE L1 5323 6171 0 517 305 51 0 chr2 250116230 250116407 -3140176 + L1MEd LINE L1 596 781 -5424 227 295 21 32 chr2 250116526 250116621 -3139962 - L2 LINE L2 -40 3273 3180 604 286 91 54 chr2 250117434 250117582 -3139001 + L1MEd LINE L1 1011 1152 -5244 1710 172 0 46 chr2 250117582 250117907 -3138676 + AluJo SINE Alu 1 310 -2 604 286 91 54 chr2 250117907 250118371 -3138212 + L1MEd LINE L1 1152 1646 -4750 3376 210 78 58 chr2 250118502 250119596 -3136987 + LTR28 LTR ERV1 1 1750 -5 305 102 0 0 chr2 250120090 250120139 -3136444 + L1MA1 LINE L1 6254 6302 0 1662 141 3 102 chr2 250120561 250120766 -3135817 - AluJo SINE Alu -11 301 140 374 0 22 0 chr2 250120766 250120812 -3135771 + (TG)n Simple_repeat Simple_repeat 2 48 0 1662 141 3 102 chr2 250120812 250120940 -3135643 - AluJo SINE Alu -172 140 1 425 304 86 26 chr2 250120950 250121234 -3135349 + L1MEd LINE L1 2297 2779 -3436 3844 166 13 15 chr2 250121234 250121885 -3134698 + L1MB2 LINE L1 5485 6136 -35 2309 97 0 7 chr2 250121885 250122175 -3134408 + AluSx SINE Alu 3 290 -22 3844 166 13 15 chr2 250122175 250122210 -3134373 + L1MB2 LINE L1 6136 6170 -1 535 122 12 0 chr2 250122244 250122326 -3134257 - U6 snRNA snRNA -4 103 21 241 318 101 5 chr2 250122404 250122593 -3133990 + L1MEd LINE L1 2791 2997 -3218 201 39 0 0 chr2 250122813 250122839 -3133744 + (CA)n Simple_repeat Simple_repeat 2 27 0 2313 82 21 7 chr2 250123849 250124140 -3132443 - AluSx SINE Alu -17 295 1 800 195 157 15 chr2 250124193 250124454 -3132129 + MER63 DNA MER1_type 633 930 -130 1115 162 145 4 chr2 250125317 250125558 -3131025 + ORSL DNA AcHobo 1 275 0 472 297 94 38 chr2 250126696 250126962 -3129621 - L3 LINE CR1 -99 1478 1198 183 80 0 0 chr2 250127849 250127874 -3128709 + (TCC)n Simple_repeat Simple_repeat 2 26 0 2535 87 0 0 chr2 250129246 250129555 -3127028 - AluSx SINE Alu -3 309 1 257 299 75 0 chr2 250129647 250129754 -3126829 - MIR SINE MIR -78 130 16 738 253 193 26 chr2 250130082 250130470 -3126113 - MLT1C LTR MaLR -52 453 1 893 224 122 32 chr2 250131872 250132341 -3124242 + L1MC4 LINE L1 7530 8040 -2 1862 161 0 0 chr2 250132367 250132653 -3123930 - AluJb SINE Alu -12 300 15 21 0 0 0 chr2 250132921 250132942 -3123641 + AT_rich Low_complexity Low_complexity 1 21 0 713 224 0 7 chr2 250133345 250133492 -3123091 - L1PB4 LINE L1 0 6156 6011 350 268 32 32 chr2 250133499 250133622 -3122961 + Charlie8 DNA MER1_type 140 262 -2155 433 315 101 33 chr2 250133624 250133900 -3122683 - HAL1 LINE L1 -1454 1053 759 2044 62 12 0 chr2 250134436 250134679 -3121904 - AluSq SINE Alu -67 246 1 512 159 189 15 chr2 250134839 250134971 -3121612 + MIR SINE MIR 108 262 0 2272 116 0 0 chr2 250135795 250136088 -3120495 - AluSx SINE Alu -19 293 1 1112 149 23 0 chr2 250136179 250136353 -3120230 - AluSg/x SINE Alu -1 311 134 1738 115 8 0 chr2 250136353 250136588 -3119995 - AluSg/x SINE Alu -10 302 66 1112 200 3 42 chr2 250137050 250137360 -3119223 - AluSx SINE Alu -9 303 6 746 284 89 34 chr2 250138533 250139129 -3117454 + L1MC4a LINE L1 5298 5926 -1882 441 0 0 0 chr2 250139855 250139904 -3116679 + (TTA)n Simple_repeat Simple_repeat 2 50 0 1611 166 26 15 chr2 250139911 250140182 -3116401 - AluJb SINE Alu -36 276 3 2184 113 7 7 chr2 250140200 250140509 -3116074 - AluSq SINE Alu -4 309 1 2502 87 0 0 chr2 250142411 250142720 -3113863 + AluSg SINE Alu 1 309 -1 207 223 0 74 chr2 250144612 250144733 -3111850 + C-rich Low_complexity Low_complexity 3 114 0 7754 25 9 0 chr2 250146126 250147433 -3109150 - L1PA4 LINE L1 0 6155 4844 801 183 0 0 chr2 250147453 250147584 -3108999 - FLAM_C SINE Alu -1 132 2 222 204 37 0 chr2 250147917 250147971 -3108612 + MIR SINE MIR 195 250 -12 4379 209 56 36 chr2 250147989 250148463 -3108120 + L1MD1 LINE L1 4257 4720 -1522 2147 107 11 0 chr2 250148463 250148743 -3107840 - AluSx SINE Alu -22 290 8 4379 209 56 36 chr2 250148743 250149790 -3106793 + L1MD1 LINE L1 4720 5745 -497 2280 90 3 13 chr2 250149790 250150090 -3106493 + AluSp SINE Alu 1 297 -16 4379 209 56 36 chr2 250150090 250150455 -3106128 + L1MD1 LINE L1 5745 6182 -60 756 156 33 8 chr2 250150455 250150577 -3106006 - FLAM_A SINE Alu -7 126 2 4379 209 56 36 chr2 250150577 250150635 -3105948 + L1MD1 LINE L1 6182 6237 -5 1919 168 0 16 chr2 250151410 250151725 -3104858 + AluSx SINE Alu 1 310 -2 571 229 140 11 chr2 250151834 250152013 -3104570 + MIR SINE MIR 60 261 -1 2218 124 0 0 chr2 250152879 250153201 -3103382 - AluSx SINE Alu 0 322 1 30 27 0 0 chr2 250153206 250153243 -3103340 + AT_rich Low_complexity Low_complexity 1 37 0 606 168 126 26 chr2 250153243 250153434 -3103149 + L1PB4 LINE L1 5957 6166 0 1652 137 27 131 chr2 250153734 250154071 -3102512 + AluJb SINE Alu 1 302 0 2277 110 0 3 chr2 250154274 250154575 -3102008 - AluSx SINE Alu -12 300 1 1745 175 14 24 chr2 250154577 250154868 -3101715 - AluJo SINE Alu -24 288 1 664 274 73 29 chr2 250154868 250155182 -3101401 - L1ME3A LINE L1 -295 5875 5548 422 285 172 18 chr2 250155448 250155669 -3100914 + MIR SINE MIR 6 260 -2 2451 156 17 36 chr2 250155947 250156054 -3100529 + MER65C LTR ERV1 3 111 -350 2415 93 0 0 chr2 250156054 250156355 -3100228 + AluSx SINE Alu 1 301 -11 2451 156 17 36 chr2 250156355 250156715 -3099868 + MER65C LTR ERV1 111 461 0 1160 203 17 0 chr2 250156746 250156983 -3099600 + MER34 LTR ERV1 1 241 -301 415 154 0 0 chr2 250156985 250157050 -3099533 + Charlie3 DNA MER1_type 2642 2706 -4 356 301 52 39 chr2 250157085 250157238 -3099345 - L1ME3A LINE L1 -2064 4082 3928 2592 58 0 3 chr2 250157351 250157663 -3098920 + AluY SINE Alu 1 311 0 1837 115 11 52 chr2 250157984 250158270 -3098313 + AluSg SINE Alu 1 274 -36 468 51 0 0 chr2 250158270 250158329 -3098254 + (CATA)n Simple_repeat Simple_repeat 1 59 0 346 327 44 24 chr2 250158373 250158578 -3098005 + L1MEc LINE L1 92 300 -6096 339 276 17 23 chr2 250158626 250158803 -3097780 + L1MEc LINE L1 2100 2236 -3981 240 330 43 0 chr2 250159020 250159135 -3097448 + L1MC/D LINE L1 5617 5736 -2072 209 161 0 0 chr2 250159311 250159342 -3097241 - L2 LINE L2 -16 3256 3226 358 310 71 13 chr2 250160142 250160368 -3096215 - HAL1b LINE L1 -807 541 303 189 139 0 0 chr2 250161512 250161555 -3095028 + (A)n Simple_repeat Simple_repeat 1 43 0 354 252 89 44 chr2 250162426 250162561 -3094022 - MER5B DNA MER1_type -18 160 20 235 294 63 14 chr2 250163325 250163468 -3093115 - L2 LINE L2 -167 3146 2997 339 409 23 0 chr2 250164054 250164230 -3092353 + L1M4 LINE L1 3693 3872 -2274 289 169 68 0 chr2 250164274 250164333 -3092250 + L2 LINE L2 3210 3272 0 413 228 113 67 chr2 250164353 250164595 -3091988 + L1MEc LINE L1 3071 3329 -2886 266 0 29 0 chr2 250164619 250164653 -3091930 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 189 0 0 0 chr2 250164652 250164673 -3091910 + (CTAAA)n Simple_repeat Simple_repeat 3 23 0 * 607 266 95 28 chr2 250164750 250165249 -3091334 + L1MEc LINE L1 3494 4030 -2185 1003 135 45 6 chr2 250165263 250165441 -3091142 + AluJb SINE Alu 126 310 -2 274 301 35 21 chr2 250165448 250165591 -3090992 + L1MEc LINE L1 4144 4288 -1927 495 286 160 0 chr2 250165612 250165825 -3090758 + MIR SINE MIR 16 262 0 321 347 31 16 chr2 250165894 250166294 -3090289 + L1MEc LINE L1 4387 4849 -1366 1575 215 34 21 chr2 250166314 250166640 -3089943 + MER58B DNA MER1_type 12 341 0 514 283 122 31 chr2 250166644 250166998 -3089585 + L1MEc LINE L1 4884 5269 -946 21473 60 0 1 chr2 250166998 250170535 -3086048 + L1PA6 LINE L1 2612 6153 -1 1219 197 62 13 chr2 250170753 250171062 -3085521 - MER33 DNA MER1_type 0 324 1 386 330 30 20 chr2 250171116 250171319 -3085264 - HAL1b LINE L1 -769 579 375 328 270 5 5 chr2 250172193 250172417 -3084166 + (CA)n Simple_repeat Simple_repeat 1 224 0 1049 215 177 24 chr2 250172418 250172850 -3083733 + L1MC4a LINE L1 6614 6999 -809 401 313 83 27 chr2 250172880 250173261 -3083322 + L1MD3 LINE L1 7275 7772 -223 2240 85 0 7 chr2 250173694 250173988 -3082595 + AluSq SINE Alu 1 292 -21 291 283 108 8 chr2 250174845 250174965 -3081618 + MIR SINE MIR 14 145 -117 2328 87 0 6 chr2 250175472 250175784 -3080799 - AluSg SINE Alu 0 310 1 2100 67 46 14 chr2 250176417 250176702 -3079881 - AluY SINE Alu -17 294 1 1640 164 20 3 chr2 250176981 250177286 -3079297 - AluJo SINE Alu -2 310 1 307 160 46 153 chr2 250177876 250178007 -3078576 + L1 LINE L1 3071 3187 -2959 2131 124 3 0 chr2 250178678 250178985 -3077598 - AluSg SINE Alu -2 308 1 622 318 119 35 chr2 250179153 250179716 -3076867 + L1ME1 LINE L1 2806 3415 -2731 834 245 150 21 chr2 250180004 250180331 -3076252 + MLT1J LTR MaLR 143 511 0 695 328 74 45 chr2 250180357 250180842 -3075741 - L2 LINE L2 -1107 2207 1709 312 315 36 27 chr2 250180842 250180953 -3075630 + L1ME1 LINE L1 4584 4695 -1451 1646 130 11 8 chr2 250181354 250181615 -3074968 + AluJb SINE Alu 35 296 -16 837 200 123 0 chr2 250181701 250181778 -3074805 + L1ME1 LINE L1 5364 5430 -725 2032 91 11 7 chr2 250181778 250182063 -3074520 - AluSc SINE Alu -23 286 1 837 200 123 0 chr2 250182063 250182187 -3074396 + L1ME1 LINE L1 5430 5588 -567 800 152 8 0 chr2 250182188 250182320 -3074263 - FLAM_C SINE Alu -10 133 1 1951 193 12 57 chr2 250182325 250182392 -3074191 + L1ME1 LINE L1 5575 5643 -523 2774 155 52 26 chr2 250182392 250182928 -3073655 + MER44D DNA MER2_type 1 605 0 1951 193 12 57 chr2 250182928 250183393 -3073190 + L1ME1 LINE L1 5643 6001 -165 320 279 70 36 chr2 250183391 250183542 -3073041 + L1MC4 LINE L1 5495 5656 -514 * 758 205 89 32 chr2 250183548 250183738 -3072845 + MER58A DNA MER1_type 7 207 -17 266 157 39 0 chr2 250183806 250183857 -3072726 + L1MC4 LINE L1 5704 5756 -2052 1688 178 11 0 chr2 250184123 250184410 -3072173 - AluSx SINE Alu -22 290 1 25 0 0 0 chr2 250184412 250184437 -3072146 + AT_rich Low_complexity Low_complexity 1 25 0 908 45 0 0 chr2 250184440 250184551 -3072032 + AluY SINE Alu 186 296 -15 2363 70 0 0 chr2 250185587 250185887 -3070696 + AluY SINE Alu 1 300 -11 1353 160 0 0 chr2 250186153 250186366 -3070217 - AluJb SINE Alu -15 297 85 532 285 127 65 chr2 250187221 250187827 -3068756 + L1MC4 LINE L1 5737 6304 -1504 2079 90 3 3 chr2 250187827 250188116 -3068467 + AluSg SINE Alu 1 289 -21 240 59 0 0 chr2 250188121 250188155 -3068428 + (TAAAA)n Simple_repeat Simple_repeat 3 36 0 532 285 127 65 chr2 250188155 250188699 -3067884 + L1MC4 LINE L1 6307 6911 -897 1951 140 0 0 chr2 250188702 250188994 -3067589 + AluSx SINE Alu 1 292 -20 246 315 93 0 chr2 250189057 250189165 -3067418 + L1MC5 LINE L1 6976 7093 -868 199 185 0 111 chr2 250189217 250189271 -3067312 - L3b LINE CR1 -5 1578 1531 498 188 0 0 chr2 250190838 250190939 -3065644 + (CA)n Simple_repeat Simple_repeat 1 101 0 1308 272 156 7 chr2 250191259 250191977 -3064606 + L2 LINE L2 361 1185 -2129 404 251 169 16 chr2 250192057 250192240 -3064343 - MER20 DNA MER1_type -8 211 1 473 259 189 19 chr2 250192394 250192653 -3063930 + L2 LINE L2 1547 1849 -1465 2080 115 7 3 chr2 250192690 250192986 -3063597 - AluSx SINE Alu -15 297 1 415 264 178 25 chr2 250194462 250194625 -3061958 + L1ME4a LINE L1 5932 6119 -2 2276 74 3 0 chr2 250194847 250195153 -3061430 + AluSp SINE Alu 1 307 0 2036 102 0 0 chr2 250198465 250198739 -3057844 - AluSx SINE Alu 0 312 39 2245 107 0 0 chr2 250199194 250199504 -3057079 + AluSg SINE Alu 1 310 0 452 240 27 41 chr2 250199596 250199742 -3056841 + L1M4 LINE L1 3999 4142 -2004 1559 136 15 33 chr2 250200050 250200322 -3056261 - AluJo SINE Alu -17 295 29 272 242 0 30 chr2 250200772 250200838 -3055745 + L2 LINE L2 3209 3272 0 226 115 39 19 chr2 250202912 250202964 -3053619 + (TGAA)n Simple_repeat Simple_repeat 4 56 0 267 190 43 35 chr2 250203491 250203607 -3052976 + (CGCGG)n Simple_repeat Simple_repeat 5 121 0 288 211 11 44 chr2 250204471 250204561 -3052022 - MIR3 SINE MIR -8 200 114 191 326 56 22 chr2 250205135 250205224 -3051359 + MIR3 SINE MIR 113 204 -4 475 277 48 2 chr2 250206388 250206586 -3049997 + L1ME3A LINE L1 5899 6109 -53 2105 124 7 0 chr2 250207749 250208056 -3048527 - AluSx SINE Alu -3 309 1 733 264 66 5 chr2 250208103 250208300 -3048283 - MIR SINE MIR -46 216 8 460 275 276 2 chr2 250208453 250208774 -3047809 + L2 LINE L2 2602 3016 -297 362 242 92 17 chr2 250209427 250209547 -3047036 + L2 LINE L2 3149 3277 -36 311 193 57 34 chr2 250209758 250209846 -3046737 - L2 LINE L2 -51 3262 3173 221 264 256 16 chr2 250209949 250210265 -3046318 - L2 LINE L2 -333 2980 2590 334 290 85 23 chr2 250210361 250210646 -3045937 - L1MC/D LINE L1 -745 5425 5323 2512 71 0 0 chr2 250210916 250211211 -3045372 + AluSc SINE Alu 1 295 -14 439 206 16 56 chr2 250211218 250211344 -3045239 - HAL1b LINE L1 -893 455 335 289 145 12 5 chr2 250213462 250213710 -3042873 + AluJo SINE Alu 21 301 -1 218 81 27 0 chr2 250213710 250213747 -3042836 + (GA)n Simple_repeat Simple_repeat 1 38 0 484 262 43 21 chr2 250215455 250215596 -3040987 + MER20 DNA MER1_type 1 144 -75 1706 136 4 0 chr2 250216171 250216406 -3040177 - AluJo SINE Alu -76 236 1 521 318 89 25 chr2 250216699 250217023 -3039560 - Charlie7 DNA MER1_type -1915 697 353 2487 73 0 7 chr2 250217847 250218150 -3038433 + AluSc SINE Alu 1 301 -8 1317 110 0 0 chr2 250218150 250218314 -3038269 + AluSq SINE Alu 134 297 -16 2547 128 56 2 chr2 250219674 250220135 -3036448 - LTR19A LTR ERV1 0 486 1 1199 181 45 13 chr2 250221630 250222019 -3034564 - LTR47A LTR ERVL 0 452 1 2106 114 6 38 chr2 250224741 250225057 -3031526 - AluSx SINE Alu -6 306 1 352 203 0 0 chr2 250225395 250225464 -3031119 + AluJ/FLAM SINE Alu 3 71 -231 2195 98 3 7 chr2 250225582 250225879 -3030704 + AluSc SINE Alu 1 296 -13 1759 163 6 53 chr2 250226844 250227163 -3029420 + AluJo SINE Alu 1 304 -8 301 206 16 24 chr2 250227732 250227858 -3028725 + CT-rich Low_complexity Low_complexity 3 127 0 2330 91 3 0 chr2 250231228 250231524 -3025059 + AluSx SINE Alu 1 297 -15 2495 89 0 0 chr2 250234010 250234313 -3022270 + AluSx SINE Alu 1 303 -9 212 311 0 40 chr2 250237014 250237088 -3019495 - MER91A DNA MER1_type -125 71 1 294 158 158 0 chr2 250241702 250241822 -3014761 - THE1C LTR MaLR 0 375 237 1655 173 13 32 chr2 250243181 250243493 -3013090 + AluJo SINE Alu 1 306 -6 1418 172 137 0 chr2 250243493 250243749 -3012834 + AluJo SINE Alu 1 291 -21 2332 89 3 0 chr2 250243756 250244047 -3012536 + AluSc SINE Alu 1 292 -17 2177 137 3 0 chr2 250244851 250245158 -3011425 + AluSx SINE Alu 1 308 -4 212 348 25 25 chr2 250245245 250245363 -3011220 + MIR SINE MIR 14 131 -131 24 0 0 0 chr2 250245583 250245607 -3010976 + AT_rich Low_complexity Low_complexity 1 24 0 441 333 66 14 chr2 250245613 250245819 -3010764 + L1MC4 LINE L1 7695 7914 -128 1860 164 3 7 chr2 250245819 250246106 -3010477 + AluJo SINE Alu 2 287 -25 1021 130 0 0 chr2 250246117 250246255 -3010328 + AluSg/x SINE Alu 136 273 -39 218 28 0 56 chr2 250246255 250246291 -3010292 + (TCTCTG)n Simple_repeat Simple_repeat 2 35 0 204 40 0 0 chr2 250246305 250246330 -3010253 + (CA)n Simple_repeat Simple_repeat 2 26 0 303 214 136 0 chr2 250246339 250246442 -3010141 + L1MC4 LINE L1 7926 8042 0 230 273 106 30 chr2 250247437 250247569 -3009014 - MIR SINE MIR -90 172 31 758 303 132 48 chr2 250248869 250249685 -3006898 + L2 LINE L2 1889 2773 -541 1936 126 36 4 chr2 250251048 250251326 -3005257 + AluSx SINE Alu 1 287 -25 190 263 0 0 chr2 250255274 250255312 -3001271 - MIR SINE MIR -136 72 35 2328 77 0 59 chr2 250255638 250255961 -3000622 - AluSc SINE Alu -5 304 1 372 320 16 31 chr2 250257374 250257502 -2999081 - L2 LINE L2 0 3272 3147 387 317 0 19 chr2 250257854 250258209 -2998374 + CT-rich Low_complexity Low_complexity 1 348 0 3804 164 19 10 chr2 250258838 250259570 -2997013 + L1MB3 LINE L1 5444 6182 -1 265 232 134 0 chr2 250259590 250259702 -2996881 - L3 LINE CR1 -44 1533 1407 199 309 11 53 chr2 250259691 250259785 -2996798 - L2 LINE L2 -3 3269 3180 * 2190 112 3 0 chr2 250262237 250262541 -2994042 + AluSc SINE Alu 1 305 -4 2106 136 0 0 chr2 250262771 250263080 -2993503 + AluSx SINE Alu 1 309 -3 2007 141 0 0 chr2 250263760 250264057 -2992526 + AluSx SINE Alu 1 297 -15 2040 135 6 3 chr2 250264421 250264732 -2991851 - AluJb SINE Alu 0 312 1 180 200 0 100 chr2 250264833 250264893 -2991690 - L2 LINE L2 -86 3186 3133 268 301 6 25 chr2 250266076 250266239 -2990344 + C-rich Low_complexity Low_complexity 3 162 0 * 359 168 12 98 chr2 250266167 250266340 -2990243 + (CCCGG)n Simple_repeat Simple_repeat 3 160 0 32 0 0 0 chr2 250266541 250266573 -2990010 + GC_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr2 250266690 250266718 -2989865 + GC_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 250266790 250266812 -2989771 + GC_rich Low_complexity Low_complexity 1 22 0 1939 124 0 0 chr2 250267350 250267641 -2988942 - AluSx SINE Alu -17 295 5 603 241 7 0 chr2 250267644 250267789 -2988794 - L1MDa LINE L1 -4573 2034 1889 1646 106 0 4 chr2 250267955 250268190 -2988393 + AluSg/x SINE Alu 67 300 -12 2089 134 0 0 chr2 250268196 250268502 -2988081 + AluSx SINE Alu 5 310 -2 486 281 93 5 chr2 250268502 250268722 -2987861 - L1MDa LINE L1 -4649 1777 1420 2611 210 67 40 chr2 250268727 250269158 -2987425 - L1ME1 LINE L1 -15 6155 5737 2027 145 0 0 chr2 250269158 250269454 -2987129 + AluSx SINE Alu 1 296 -16 2611 210 67 40 chr2 250269454 250269686 -2986897 - L1ME1 LINE L1 -433 5737 5513 2258 102 3 10 chr2 250269686 250270000 -2986583 - AluSq SINE Alu -1 312 1 2611 210 67 40 chr2 250270000 250270037 -2986546 - L1ME1 LINE L1 -657 5513 5478 2073 89 4 4 chr2 250270037 250270317 -2986266 - AluY SINE Alu -31 280 1 2611 210 67 40 chr2 250270317 250270534 -2986049 - L1ME1 LINE L1 -692 5478 5276 4915 162 24 41 chr2 250273849 250274271 -2982312 - L1MA9 LINE L1 -6 6306 5878 2364 96 0 0 chr2 250274271 250274583 -2982000 - AluSx SINE Alu 0 312 1 4915 162 24 41 chr2 250274583 250274867 -2981716 - L1MA9 LINE L1 -434 5878 5591 2039 133 7 0 chr2 250274867 250275176 -2981407 + AluSx SINE Alu 1 311 -1 4915 162 24 41 chr2 250275176 250275921 -2980662 - L1MA9 LINE L1 -721 5591 4876 1487 191 3 52 chr2 250275921 250276086 -2980497 - AluJo SINE Alu -18 294 149 2109 118 0 10 chr2 250276086 250276391 -2980192 - AluSx SINE Alu -10 302 1 1487 191 3 52 chr2 250276391 250276534 -2980049 - AluJo SINE Alu -163 149 1 4915 162 24 41 chr2 250276534 250276566 -2980017 - L1MA9 LINE L1 -1436 4876 4845 2267 75 0 0 chr2 250276865 250277157 -2979426 + AluY SINE Alu 1 292 -19 252 0 0 0 chr2 250277516 250277544 -2979039 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1585 270 56 73 chr2 250277546 250278228 -2978355 + HERVL LTR ERVL 597 1266 -3730 4012 312 94 43 chr2 250278302 250279258 -2977325 + HERVL LTR ERVL 1573 2479 -3175 2050 108 16 29 chr2 250279258 250279573 -2977010 + AluSx SINE Alu 1 311 -1 4012 312 94 43 chr2 250279573 250280701 -2975882 + HERVL LTR ERVL 2479 3548 -2106 2444 187 50 40 chr2 250280701 250281016 -2975567 - MLT1D LTR MaLR 0 505 182 2288 85 3 10 chr2 250281016 250281323 -2975260 - AluSq SINE Alu -8 305 1 2444 187 50 40 chr2 250281323 250281505 -2975078 - MLT1D LTR MaLR -323 182 3 4012 312 94 43 chr2 250281505 250282594 -2973989 + HERVL LTR ERVL 3548 4898 -756 308 304 78 0 chr2 250282851 250282966 -2973617 + HERVL LTR ERVL 5229 5352 -412 333 0 0 0 chr2 250283267 250283304 -2973279 + (CA)n Simple_repeat Simple_repeat 1 37 0 183 74 0 0 chr2 250284376 250284384 -2972199 + (TTG)n Simple_repeat Simple_repeat 2 9 -19 2168 94 28 0 chr2 250284384 250284672 -2971911 + AluSc SINE Alu 1 296 -13 183 74 0 0 chr2 250284672 250284690 -2971893 + (TTG)n Simple_repeat Simple_repeat 8 28 0 368 260 73 11 chr2 250285519 250285680 -2970903 - L1ME4a LINE L1 0 6097 1182 2121 106 0 3 chr2 250285737 250286030 -2970553 - AluSq SINE Alu -21 292 1 547 222 7 44 chr2 250286839 250286974 -2969609 - MER63 DNA MER1_type -80 756 1 2272 99 0 6 chr2 250287557 250287869 -2968714 - AluSx SINE Alu -2 310 1 1714 86 0 41 chr2 250287893 250288138 -2968445 - AluSx SINE Alu -77 235 1 525 198 0 0 chr2 250288450 250288546 -2968037 - MER58C DNA MER1_type 0 215 120 2363 65 0 7 chr2 250288793 250289103 -2967480 + AluY SINE Alu 1 308 -3 531 233 0 0 chr2 250291476 250291579 -2965004 + FRAM SINE Alu 17 119 -57 945 121 0 17 chr2 250291595 250291768 -2964815 + (GAA)n Simple_repeat Simple_repeat 2 171 0 865 162 73 34 chr2 250292481 250292685 -2963898 - THE1C LTR MaLR -163 212 1 312 86 0 136 chr2 250293300 250293359 -2963224 + L1MD3 LINE L1 7919 7966 -29 2414 54 0 0 chr2 250293359 250293657 -2962926 + AluY SINE Alu 1 298 -13 312 86 0 136 chr2 250293657 250293678 -2962905 + L1MD3 LINE L1 7966 7988 -7 220 289 252 3 chr2 250293948 250294242 -2962341 + L2 LINE L2 1806 2172 -1142 529 293 88 8 chr2 250294444 250294708 -2961875 + L2 LINE L2 2732 3016 -297 1870 228 139 4 chr2 250294724 250295219 -2961364 - MLT1F1 LTR MaLR 0 567 6 193 146 36 73 chr2 250295306 250295361 -2961222 + L2 LINE L2 3172 3224 -89 2260 82 0 0 chr2 250295426 250295719 -2960864 - AluY SINE Alu -18 293 1 22 0 0 0 chr2 250296140 250296162 -2960421 + AT_rich Low_complexity Low_complexity 1 22 0 2361 69 13 3 chr2 250297240 250297546 -2959037 - AluSq SINE Alu 0 313 5 25 0 0 0 chr2 250298328 250298353 -2958230 + AT_rich Low_complexity Low_complexity 1 25 0 317 240 84 39 chr2 250299858 250300037 -2956546 - HAL1 LINE L1 -301 2206 2020 273 357 0 0 chr2 250301449 250301575 -2955008 + G-rich Low_complexity Low_complexity 1 126 0 186 103 0 0 chr2 250301901 250301930 -2954653 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 219 69 0 0 chr2 250301932 250301961 -2954622 + (CGGA)n Simple_repeat Simple_repeat 2 30 0 23 54 0 0 chr2 250302038 250302075 -2954508 + GC_rich Low_complexity Low_complexity 1 37 0 24 0 0 0 chr2 250302187 250302211 -2954372 + GC_rich Low_complexity Low_complexity 1 24 0 39 50 0 0 chr2 250302802 250302862 -2953721 + GC_rich Low_complexity Low_complexity 1 60 0 1578 192 126 39 chr2 250305753 250306190 -2950393 - MLT1D LTR MaLR 0 505 31 865 317 155 41 chr2 250306208 250307141 -2949442 + L2 LINE L2 1461 2540 -774 2236 71 0 3 chr2 250307141 250307475 -2949108 - AluY SINE Alu 0 311 2 865 317 155 41 chr2 250307475 250307642 -2948941 + L2 LINE L2 2540 2687 -627 182 62 31 0 chr2 250310495 250310527 -2946056 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 23 33 0 0 chr2 250310872 250310902 -2945681 + GC_rich Low_complexity Low_complexity 1 30 0 201 232 61 73 chr2 250311038 250311120 -2945463 - L2 LINE L2 -20 3252 3172 434 327 114 51 chr2 250311630 250311919 -2944664 + L2 LINE L2 1716 1985 -1329 1780 175 0 7 chr2 250311919 250312205 -2944378 + AluJo SINE Alu 5 288 -24 434 327 114 51 chr2 250312205 250312293 -2944290 + L2 LINE L2 1985 2066 -1248 1670 147 65 27 chr2 250312293 250312586 -2943997 - AluJb SINE Alu -7 305 2 434 327 114 51 chr2 250312586 250312899 -2943684 + L2 LINE L2 2066 2451 -863 243 309 0 0 chr2 250313461 250313529 -2943054 - L2 LINE L2 -2 3270 3203 2524 81 3 3 chr2 250313591 250313901 -2942682 - AluSq SINE Alu -3 310 1 286 273 118 9 chr2 250313976 250314086 -2942497 + MIR SINE MIR 103 224 -38 249 211 19 10 chr2 250314185 250314289 -2942294 + CT-rich Low_complexity Low_complexity 1 105 0 320 204 75 43 chr2 250315410 250315503 -2941080 - L2 LINE L2 -221 3051 2956 610 271 70 55 chr2 250315962 250316290 -2940293 - MLT1E LTR MaLR -6 587 285 233 282 118 9 chr2 250316347 250316457 -2940126 - MLT1E LTR MaLR -420 122 1 231 114 0 0 chr2 250316871 250316906 -2939677 + REP3 LTR ERV 26 60 -502 454 249 206 5 chr2 250317050 250317239 -2939344 + REP3 LTR ERV 336 562 0 331 324 58 0 chr2 250317812 250317951 -2938632 - L1ME2 LINE L1 -29 6135 5989 2312 105 3 16 chr2 250318026 250318341 -2938242 - AluSq SINE Alu -2 311 1 2456 71 0 0 chr2 250318648 250318944 -2937639 + AluY SINE Alu 1 296 -15 414 171 0 9 chr2 250318980 250319190 -2937393 + AluJo SINE Alu 2 300 -12 545 170 0 32 chr2 250319394 250319488 -2937095 + FRAM SINE Alu 65 155 -21 857 219 96 56 chr2 250319789 250320059 -2936524 + AluJo SINE Alu 1 281 -31 1507 189 71 0 chr2 250320174 250320454 -2936129 - AluJo SINE Alu -10 302 3 293 193 0 0 chr2 250320703 250320760 -2935823 + AluJ/FLAM SINE Alu 2 58 -244 3688 161 106 43 chr2 250320794 250321760 -2934823 + MER52C LTR ERV1 95 1270 -8 684 138 8 77 chr2 250321760 250321890 -2934693 + FRAM SINE Alu 46 166 -10 4316 177 52 28 chr2 250322383 250324131 -2932452 - L1MB8 LINE L1 -42 6136 4351 2453 86 0 3 chr2 250324448 250324749 -2931834 - AluSx SINE Alu -12 300 1 32 26 0 0 chr2 250325010 250325049 -2931534 + AT_rich Low_complexity Low_complexity 1 39 0 635 182 0 0 chr2 250325058 250325157 -2931426 - AluJ/FLAM SINE Alu -212 100 2 1282 160 17 39 chr2 250325174 250325405 -2931178 - AluJb SINE Alu -86 226 1 27 100 0 0 chr2 250325439 250325529 -2931054 + AT_rich Low_complexity Low_complexity 1 90 0 885 109 0 0 chr2 250325614 250325742 -2930841 + L1M3 LINE L1 5537 5664 -516 1860 109 0 0 chr2 250325745 250325984 -2930599 + AluSq SINE Alu 1 239 -74 5394 40 4 1 chr2 250326091 250327164 -2929419 + L1P1 LINE L1 4698 5773 -382 2239 86 7 0 chr2 250327607 250327933 -2928650 - AluSg SINE Alu 0 328 1 327 227 64 55 chr2 250327950 250328060 -2928523 + L1ME LINE L1 5635 5745 -376 892 247 44 7 chr2 250328080 250328355 -2928228 - Charlie1b DNA MER1_type -199 324 40 484 288 194 25 chr2 250328450 250328705 -2927878 - L2 LINE L2 -602 2712 2405 2738 96 6 3 chr2 250328705 250329068 -2927515 - THE1B LTR MaLR 0 364 1 484 288 194 25 chr2 250329068 250329090 -2927493 - L2 LINE L2 -909 2405 2388 645 76 0 0 chr2 250329374 250329453 -2927130 - AluSg SINE Alu -230 80 2 235 258 0 16 chr2 250329527 250329601 -2926982 - THE1-int LTR MaLR -1478 102 40 1637 207 10 3 chr2 250329605 250329909 -2926674 - AluJo SINE Alu -6 306 1 346 181 126 172 chr2 250329953 250330168 -2926415 - MLT1F LTR MaLR -2 553 349 18884 116 29 15 chr2 250330168 250333174 -2923409 + L1M1 LINE L1 35 3080 -4485 1719 188 11 3 chr2 250333174 250333461 -2923122 + AluJo SINE Alu 1 289 -23 4113 182 22 52 chr2 250333469 250333945 -2922638 + L1M1 LINE L1 3464 3952 -3613 2343 112 3 0 chr2 250333945 250334257 -2922326 + AluSq SINE Alu 1 313 0 4113 182 22 52 chr2 250334257 250334775 -2921808 + L1M1 LINE L1 3952 4484 -3081 1916 156 0 0 chr2 250334775 250335078 -2921505 + AluSx SINE Alu 1 303 0 4113 182 22 52 chr2 250335078 250335103 -2921480 + L1M1 LINE L1 4484 4508 -3057 2241 67 53 0 chr2 250335103 250335386 -2921197 + AluY SINE Alu 14 311 0 4113 182 22 52 chr2 250335386 250335572 -2921011 + L1M1 LINE L1 4508 4631 -2934 1371 122 5 11 chr2 250335572 250335760 -2920823 + AluSq SINE Alu 1 187 -126 41568 93 13 16 chr2 250335875 250341742 -2914841 + HERVFH19I LTR ERV1 1676 7531 -188 2463 57 0 38 chr2 250341742 250342058 -2914525 - AluY SINE Alu -7 304 1 41568 93 13 16 chr2 250342058 250342247 -2914336 + HERVFH19I LTR ERV1 7531 7719 0 1994 144 178 10 chr2 250342247 250342663 -2913920 + LTR19A LTR ERV1 1 486 0 2525 191 87 4 chr2 250342775 250343336 -2913247 - MER90 LTR ERV1 -2 612 5 29 84 0 0 chr2 250343795 250343866 -2912717 + GC_rich Low_complexity Low_complexity 1 71 0 25 75 0 0 chr2 250343903 250343956 -2912627 + GC_rich Low_complexity Low_complexity 1 53 0 25 75 0 0 chr2 250344139 250344192 -2912391 + GC_rich Low_complexity Low_complexity 1 53 0 25 31 0 0 chr2 250344405 250344437 -2912146 + GC_rich Low_complexity Low_complexity 1 32 0 226 304 119 54 chr2 250344932 250345100 -2911483 - MER5A DNA MER1_type -10 179 1 2195 104 24 0 chr2 250345334 250345631 -2910952 - AluSq SINE Alu -9 304 1 443 256 91 55 chr2 250346120 250346319 -2910264 + L3 LINE CR1 607 812 -765 250 286 264 22 chr2 250346558 250346736 -2909847 + MIR SINE MIR 34 254 -8 1764 163 7 10 chr2 250346742 250347036 -2909547 - AluJb SINE Alu -19 293 1 679 171 0 50 chr2 250347659 250347799 -2908784 + FLAM_C SINE Alu 1 133 0 325 228 163 16 chr2 250347861 250347984 -2908599 + L1MC/D LINE L1 5112 5252 -894 232 291 27 9 chr2 250347985 250348095 -2908488 + L1MC/D LINE L1 5267 5378 -2430 241 299 246 4 chr2 250348116 250348384 -2908199 + L1MC/D LINE L1 5440 5772 -2036 1933 153 0 13 chr2 250349035 250349336 -2907247 + AluJo SINE Alu 1 297 -15 259 217 33 109 chr2 250349484 250349576 -2907007 + MIR SINE MIR 164 248 -14 * 770 185 191 21 chr2 250349557 250349746 -2906837 + MIR SINE MIR 8 228 -34 237 300 17 83 chr2 250349909 250350029 -2906554 + L3 LINE CR1 1118 1229 -348 1778 143 29 0 chr2 250350379 250350651 -2905932 - AluSx SINE Alu -32 280 1 180 97 0 0 chr2 250351177 250351208 -2905375 + (TTTTG)n Simple_repeat Simple_repeat 4 34 0 1821 159 0 24 chr2 250351210 250351505 -2905078 - AluJo SINE Alu -24 288 1 1550 175 68 0 chr2 250351585 250351848 -2904735 + AluJb SINE Alu 6 286 -26 32 0 0 0 chr2 250352028 250352060 -2904523 + AT_rich Low_complexity Low_complexity 1 32 0 1602 161 24 12 chr2 250352645 250352900 -2903683 - AluSx SINE Alu -20 292 35 301 288 68 48 chr2 250353831 250353977 -2902606 - L2 LINE L2 -1 3271 3123 2377 106 0 0 chr2 250353978 250354289 -2902294 + AluSq SINE Alu 1 311 -2 328 293 55 37 chr2 250354322 250354486 -2902097 - L2 LINE L2 -305 3008 2842 * 541 319 38 9 chr2 250354477 250354690 -2901893 - MIR SINE MIR -27 235 17 341 231 125 10 chr2 250355987 250356091 -2900492 + MIR3 SINE MIR 81 196 -12 1787 160 10 23 chr2 250359862 250360169 -2896414 - AluSx SINE Alu -9 303 1 228 67 0 0 chr2 250360676 250360706 -2895877 + (T)n Simple_repeat Simple_repeat 1 30 0 407 268 55 0 chr2 250362586 250362713 -2893870 + L1MD2 LINE L1 361 494 -6227 * 2449 227 117 32 chr2 250362710 250363341 -2893242 + L1MD2 LINE L1 1007 1583 -4957 1604 112 123 11 chr2 250363341 250363609 -2892974 + AluSg1 SINE Alu 1 298 -11 2449 227 117 32 chr2 250363609 250364038 -2892545 + L1MD2 LINE L1 1583 1974 -4566 1619 161 10 32 chr2 250364038 250364175 -2892408 + AluJo SINE Alu 1 140 -172 2321 70 3 3 chr2 250364175 250364474 -2892109 + AluY SINE Alu 1 299 -12 1619 161 10 32 chr2 250364474 250364647 -2891936 + AluJo SINE Alu 140 304 -8 2449 227 117 32 chr2 250364647 250364789 -2891794 + L1MD2 LINE L1 1974 2401 -4139 1136 248 42 78 chr2 250364791 250364817 -2891766 + L1M4 LINE L1 3 28 -6514 2145 118 0 0 chr2 250364817 250365114 -2891469 - AluSx SINE Alu -15 297 1 1136 248 42 78 chr2 250365114 250365296 -2891287 + L1M4 LINE L1 28 215 -6327 2103 120 7 3 chr2 250365296 250365605 -2890978 - AluSp SINE Alu -2 311 2 1136 248 42 78 chr2 250365605 250365749 -2890834 + L1M4 LINE L1 215 339 -6203 1948 107 4 0 chr2 250365749 250366021 -2890562 - AluSx SINE Alu -39 273 1 1136 248 42 78 chr2 250366021 250366114 -2890469 + L1M4 LINE L1 339 434 -6108 1375 211 141 17 chr2 250366160 250366376 -2890207 + L1M4 LINE L1 4837 5025 -1619 2375 105 54 20 chr2 250366376 250366728 -2889855 + THE1B LTR MaLR 1 364 0 1375 211 141 17 chr2 250366728 250366971 -2889612 + L1M4 LINE L1 5025 5353 -1291 566 191 0 9 chr2 250366972 250367077 -2889506 - FLAM_A SINE Alu -14 128 25 1939 133 0 13 chr2 250367097 250367398 -2889185 - AluJb SINE Alu -15 297 1 1522 112 9 0 chr2 250367524 250367738 -2888845 + AluSg/x SINE Alu 87 302 -10 879 161 43 6 chr2 250367754 250367915 -2888668 + L1MB7 LINE L1 5999 6165 -19 830 245 150 3 chr2 250367920 250368405 -2888178 + L1MD2 LINE L1 2385 2942 -3598 2353 222 71 7 chr2 250368423 250369012 -2887571 + L1MD2 LINE L1 5994 6620 -133 1970 108 11 0 chr2 250369041 250369318 -2887265 - AluSg SINE Alu -30 280 1 302 177 16 16 chr2 250369318 250369380 -2887203 + L1MD1 LINE L1 6099 6160 -82 1582 86 0 5 chr2 250369381 250369591 -2886992 - AluSp SINE Alu -2 311 103 754 102 70 39 chr2 250369598 250369726 -2886857 - AluSp SINE Alu -180 133 2 336 169 70 0 chr2 250369726 250369797 -2886786 + L1MD1 LINE L1 6166 6241 -1 1724 123 32 18 chr2 250369807 250370084 -2886499 + AluJb SINE Alu 1 281 -31 252 0 0 0 chr2 250370087 250370115 -2886468 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 2241 92 0 0 chr2 250370169 250370464 -2886119 + AluSx SINE Alu 1 295 -17 557 316 168 17 chr2 250370467 250370812 -2885771 + L1MEc LINE L1 1061 1457 -4939 807 163 15 0 chr2 250370815 250370950 -2885633 - BC200 scRNA scRNA -63 137 1 499 265 99 20 chr2 250370950 250371252 -2885331 + L1MEc LINE L1 1443 1768 -4628 663 247 142 0 chr2 250371253 250371443 -2885140 - MER20 DNA MER1_type 0 219 3 360 233 103 9 chr2 250371460 250371576 -2885007 - L1MEd LINE L1 -5041 1078 952 1459 154 102 9 chr2 250371592 250371916 -2884667 - L1MC1 LINE L1 -6 6327 5974 23 0 0 0 chr2 250371992 250372015 -2884568 + AT_rich Low_complexity Low_complexity 1 23 0 2266 93 8 30 chr2 250372080 250372446 -2884137 - pTR5 LTR ERV1 -2016 422 65 318 250 10 20 chr2 250372446 250372546 -2884037 - LTR30 LTR ERV1 -80 642 544 3381 149 33 37 chr2 250372546 250373357 -2883226 - pTR5 LTR ERV1 -413 2025 743 2086 124 0 10 chr2 250373903 250374209 -2882374 - AluSx SINE Alu -7 305 3 469 269 145 16 chr2 250374469 250374662 -2881921 + MIR SINE MIR 45 262 0 297 257 206 23 chr2 250374784 250374959 -2881624 + L2 LINE L2 2301 2507 -807 346 322 48 27 chr2 250376006 250376366 -2880217 - L2 LINE L2 -255 3058 2591 2184 106 0 7 chr2 250377089 250377392 -2879191 - AluSx SINE Alu -11 301 1 228 307 102 106 chr2 250377670 250377922 -2878661 - L2 LINE L2 0 3313 3062 1877 110 107 0 chr2 250377922 250378203 -2878380 - AluSx SINE Alu -1 311 1 228 307 102 106 chr2 250378203 250378354 -2878229 - L2 LINE L2 -251 3062 2912 932 179 6 0 chr2 250378590 250378752 -2877831 - FAM SINE Alu -8 167 5 1817 173 0 0 chr2 250381110 250381405 -2875178 + AluJo SINE Alu 1 295 -17 608 304 68 18 chr2 250381582 250381802 -2874781 - L1MC/D LINE L1 -2048 5760 5530 22 35 0 0 chr2 250381832 250381861 -2874722 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr2 250381896 250381928 -2874655 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr2 250383144 250383172 -2873411 + AT_rich Low_complexity Low_complexity 1 28 0 1892 131 21 3 chr2 250383239 250383530 -2873053 + AluSx SINE Alu 1 296 -16 2118 123 0 3 chr2 250383675 250383975 -2872608 - AluSx SINE Alu -13 299 1 1382 94 10 30 chr2 250384171 250384374 -2872209 + AluSq SINE Alu 5 203 -110 919 179 124 0 chr2 250384554 250384755 -2871828 + AluJb SINE Alu 86 311 -1 279 298 8 61 chr2 250385173 250385304 -2871279 + MIR SINE MIR 23 146 -116 192 304 89 0 chr2 250386454 250386533 -2870050 - MIR SINE MIR -61 147 62 2284 78 0 3 chr2 250389937 250390230 -2866353 - AluSq SINE Alu -4 309 18 27 0 0 0 chr2 250390476 250390503 -2866080 + AT_rich Low_complexity Low_complexity 1 27 0 586 271 75 8 chr2 250390771 250391185 -2865398 - LTR33 LTR ERVL -46 475 1 1886 153 104 21 chr2 250391763 250392149 -2864434 + MSTB LTR MaLR 1 418 -8 377 200 50 0 chr2 250392864 250392944 -2863639 + MIR SINE MIR 71 154 -108 2319 72 0 0 chr2 250394669 250394959 -2861624 - AluSx SINE Alu -22 290 1 258 193 0 48 chr2 250396356 250396439 -2860144 + C-rich Low_complexity Low_complexity 3 81 0 22 0 0 0 chr2 250396463 250396485 -2860098 + GC_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr2 250396581 250396612 -2859971 + GC_rich Low_complexity Low_complexity 1 31 0 24 53 0 0 chr2 250396725 250396763 -2859820 + GC_rich Low_complexity Low_complexity 1 38 0 30 27 0 0 chr2 250401440 250401477 -2855106 + GC_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr2 250401851 250401872 -2854711 + GC_rich Low_complexity Low_complexity 1 21 0 2394 56 13 0 chr2 250402133 250402435 -2854148 + AluY SINE Alu 1 306 -5 1845 153 0 3 chr2 250402459 250402760 -2853823 - AluJb SINE Alu -11 301 2 2186 112 0 0 chr2 250405001 250405297 -2851286 + AluSx SINE Alu 1 296 -16 2210 102 0 0 chr2 250405496 250405789 -2850794 - AluSg SINE Alu -17 293 1 2304 95 0 3 chr2 250405798 250406104 -2850479 - AluY SINE Alu -6 305 1 410 248 109 22 chr2 250406109 250406246 -2850337 + L1M4 LINE L1 2681 2829 -3317 2246 102 23 3 chr2 250406288 250406591 -2849992 - AluSc SINE Alu 0 309 1 2122 128 13 3 chr2 250406591 250406896 -2849687 - AluSx SINE Alu -4 308 1 204 261 174 0 chr2 250407085 250407154 -2849429 + L2 LINE L2 3195 3275 -38 1342 109 86 38 chr2 250407158 250407368 -2849215 + AluSg/x SINE Alu 75 294 -16 981 228 0 10 chr2 250407368 250407570 -2849013 + AluJo SINE Alu 104 303 -9 2308 78 30 0 chr2 250408000 250408295 -2848288 - AluY SINE Alu -7 304 1 1142 157 32 19 chr2 250409318 250409534 -2847049 + MER20 DNA MER1_type 1 219 0 1751 183 0 3 chr2 250410076 250410361 -2846222 - AluJo SINE Alu -28 284 1 390 206 14 0 chr2 250410782 250410855 -2845728 + Tigger3(Golem) DNA MER2_type 1 74 -2955 811 117 0 39 chr2 250410856 250410984 -2845599 - FLAM_C SINE Alu -20 123 1 1361 137 102 16 chr2 250410984 250411240 -2845343 + Tigger3(Golem) DNA MER2_type 2761 3038 0 2445 83 0 3 chr2 250411508 250411809 -2844774 - AluY SINE Alu -11 300 1 1575 188 36 23 chr2 250412478 250412782 -2843801 + AluJo SINE Alu 1 308 -4 2336 98 7 0 chr2 250412844 250413151 -2843432 + AluSg SINE Alu 1 309 -1 186 196 39 20 chr2 250414070 250414121 -2842462 - L2 LINE L2 -74 3239 3188 307 268 188 0 chr2 250414196 250414308 -2842275 + MIR SINE MIR 20 152 -110 226 372 64 6 chr2 250414443 250414599 -2841984 - MIR3 SINE MIR -26 182 18 1464 42 0 0 chr2 250415179 250415346 -2841237 + AluY SINE Alu 142 308 -3 380 360 128 32 chr2 250416394 250416762 -2839821 - L1MC4a LINE L1 -1 8041 7710 1546 162 71 20 chr2 250416762 250417059 -2839524 - AluJb SINE Alu 0 312 1 380 360 128 32 chr2 250417059 250417568 -2839015 - L1MC4a LINE L1 -332 7710 7029 346 297 31 0 chr2 250417753 250417881 -2838702 - L1MC4 LINE L1 -1003 7039 6908 1532 193 16 51 chr2 250417890 250418201 -2838382 + AluJb SINE Alu 1 300 -12 405 318 84 17 chr2 250418232 250418471 -2838112 - L1MC4a LINE L1 -1102 6706 6452 1665 170 7 31 chr2 250418517 250418805 -2837778 + AluJo SINE Alu 14 294 -18 302 289 47 108 chr2 250418906 250419029 -2837554 - L1MC4a LINE L1 -1543 6265 6161 3345 149 40 21 chr2 250419029 250419687 -2836896 + L1MB3 LINE L1 5512 6181 -2 302 289 47 108 chr2 250419687 250419795 -2836788 - L1MC4a LINE L1 -1647 6161 6048 2335 98 3 0 chr2 250420562 250420857 -2835726 + AluSg SINE Alu 1 296 -14 1038 158 25 0 chr2 250421054 250421212 -2835371 + FAM SINE Alu 10 171 -14 1286 145 134 42 chr2 250421615 250421877 -2834706 + AluJo SINE Alu 17 302 -10 294 257 53 53 chr2 250422929 250423042 -2833541 + MER5B DNA MER1_type 7 119 -59 231 336 71 9 chr2 250423557 250423670 -2832913 - L2 LINE L2 -46 3226 3107 2266 102 3 40 chr2 250424641 250424966 -2831617 + AluSq SINE Alu 1 313 0 2480 96 0 3 chr2 250425532 250425846 -2830737 + AluSq SINE Alu 1 313 0 21 0 0 0 chr2 250425904 250425925 -2830658 + AT_rich Low_complexity Low_complexity 1 21 0 250 167 0 0 chr2 250430300 250430342 -2826241 + MER103 DNA DNA 42 83 -83 296 222 44 59 chr2 250430458 250430593 -2825990 + MER5A DNA MER1_type 14 146 -43 249 145 194 0 chr2 250430637 250430699 -2825884 + MIR SINE MIR 23 96 -166 4183 213 54 117 chr2 250432247 250433222 -2823361 - L1M4 LINE L1 -1983 4399 3364 904 62 78 0 chr2 250433222 250433351 -2823232 + MER85 DNA T2_type 1 139 0 4183 213 54 117 chr2 250433351 250433435 -2823148 - L1M4 LINE L1 -3018 3364 3276 1956 170 17 0 chr2 250433435 250433729 -2822854 - AluSx SINE Alu -11 301 3 4183 213 54 117 chr2 250433729 250433910 -2822673 - L1M4 LINE L1 -3106 3276 3085 1389 31 0 12 chr2 250433910 250434070 -2822513 + SVA Other Other 1229 1386 0 4183 213 54 117 chr2 250434070 250434720 -2821863 - L1M4 LINE L1 -3297 3085 2477 3087 142 89 4 chr2 250434720 250435262 -2821321 + LTR69 LTR ERVL 1 588 0 2288 108 0 7 chr2 250435279 250435584 -2820999 - AluSx SINE Alu -9 303 1 537 302 41 24 chr2 250435589 250436003 -2820580 - L1M4 LINE L1 -3940 2444 2024 2241 130 0 0 chr2 250436024 250436323 -2820260 - AluSx SINE Alu -13 299 1 1804 176 30 0 chr2 250436353 250436695 -2819888 - AluJb SINE Alu 0 351 1 1371 272 19 13 chr2 250437012 250437537 -2819046 - L1M4 LINE L1 -4897 1487 960 233 167 0 0 chr2 250438295 250438337 -2818246 - Alu SINE Alu -12 290 249 502 157 167 0 chr2 250438337 250438439 -2818144 - AluJo/FLAM SINE Alu -192 120 2 184 288 82 14 chr2 250440475 250440548 -2816035 + L2 LINE L2 3193 3270 -2 3955 212 64 33 chr2 250441151 250441628 -2814955 + L1MDa LINE L1 173 634 -5906 2282 110 10 0 chr2 250441628 250441927 -2814656 + AluSx SINE Alu 1 302 -10 2365 93 0 3 chr2 250441927 250442227 -2814356 + AluSg SINE Alu 1 300 -10 3955 212 64 33 chr2 250442227 250442749 -2813834 + L1MDa LINE L1 634 1138 -5402 2155 90 17 30 chr2 250442749 250443050 -2813533 + AluY SINE Alu 1 297 -14 3955 212 64 33 chr2 250443050 250443740 -2812843 + L1MDa LINE L1 1138 2305 -4235 1905 152 17 10 chr2 250443746 250444048 -2812535 + AluJo SINE Alu 6 309 -3 2057 135 7 10 chr2 250444052 250444349 -2812234 + AluSx SINE Alu 1 296 -16 549 193 0 0 chr2 250444349 250444437 -2812146 + Tigger2 DNA MER2_type 2631 2718 0 340 239 46 55 chr2 250444437 250444501 -2812082 - L1M4 LINE L1 -1817 4329 4266 210 37 0 0 chr2 250444501 250444528 -2812055 + (TTTAG)n Simple_repeat Simple_repeat 3 29 0 2156 102 11 3 chr2 250444528 250444813 -2811770 - AluSq SINE Alu -26 287 1 340 239 46 55 chr2 250444813 250444846 -2811737 - L1M4 LINE L1 -1879 4267 4230 1947 161 7 0 chr2 250444846 250445150 -2811433 + AluJb SINE Alu 1 306 -6 541 122 0 173 chr2 250445180 250445319 -2811264 - FLAM_C SINE Alu -27 116 2 630 105 0 0 chr2 250447067 250447181 -2809402 + (TTCC)n Simple_repeat Simple_repeat 1 114 0 252 226 179 0 chr2 250447249 250447333 -2809250 + MIR SINE MIR 51 149 -113 340 190 0 0 chr2 250448091 250448149 -2808434 - MIR SINE MIR -63 145 88 465 334 78 13 chr2 250449525 250449833 -2806750 + L2 LINE L2 2909 3236 -36 288 290 67 0 chr2 250451029 250451151 -2805432 - MIR SINE MIR -68 140 50 695 268 34 0 chr2 250451346 250451525 -2805058 - MIR SINE MIR -62 200 16 235 118 0 39 chr2 250454062 250454113 -2802470 + (CAGCC)n Simple_repeat Simple_repeat 1 49 0 486 152 0 63 chr2 250454138 250454329 -2802254 + (CAGCC)n Simple_repeat Simple_repeat 2 180 0 1290 111 0 17 chr2 250454988 250455160 -2801423 + AluSx SINE Alu 2 170 -142 348 324 33 29 chr2 250455162 250455372 -2801211 + MLT1F1 LTR MaLR 357 567 0 2023 101 22 7 chr2 250455755 250456061 -2800522 - AluSx SINE Alu 0 310 1 2137 93 14 3 chr2 250456245 250456535 -2800048 - AluSc SINE Alu -16 293 1 277 260 19 67 chr2 250456970 250457074 -2799509 + MER5B DNA MER1_type 17 104 -74 288 213 102 31 chr2 250457248 250457375 -2799208 - MIR3 SINE MIR -72 136 1 978 158 0 13 chr2 250457710 250457868 -2798715 + AluJo SINE Alu 19 174 -138 385 136 12 12 chr2 250457884 250457965 -2798618 + GA-rich Low_complexity Low_complexity 2 82 0 200 319 125 28 chr2 250458062 250458206 -2798377 - MIR SINE MIR -80 182 25 759 275 39 0 chr2 250460787 250461020 -2795563 + AluSp SINE Alu 58 299 -14 1085 199 0 23 chr2 250461024 250461240 -2795343 + AluJb SINE Alu 1 211 -101 4141 238 45 32 chr2 250461241 250461790 -2794793 + L1MC/D LINE L1 3232 3772 -2374 1838 140 13 30 chr2 250461790 250462090 -2794493 + AluJb SINE Alu 2 296 -16 4141 238 45 32 chr2 250462090 250462161 -2794422 + L1MC/D LINE L1 3772 3841 -2305 1899 167 3 0 chr2 250462161 250462466 -2794117 + AluSx SINE Alu 1 306 -6 710 174 15 15 chr2 250462475 250462607 -2793976 + FLAM_C SINE Alu 1 132 -1 4141 238 45 32 chr2 250462607 250463334 -2793249 + L1MC/D LINE L1 3848 4608 -1538 1522 197 42 28 chr2 250463339 250463516 -2793067 + L1MC/D LINE L1 4796 4969 -1292 1478 86 72 32 chr2 250463516 250463737 -2792846 - MER30 DNA MER1_type 0 230 1 1522 197 42 28 chr2 250463737 250464272 -2792311 + L1MC/D LINE L1 4969 5518 -743 1947 113 46 0 chr2 250464350 250464633 -2791950 + AluSg SINE Alu 1 296 -14 198 171 0 0 chr2 250464756 250464797 -2791786 + (CA)n Simple_repeat Simple_repeat 1 41 0 258 335 163 16 chr2 250465714 250465971 -2790612 + L2 LINE L2 2989 3283 -30 2104 112 7 0 chr2 250466078 250466365 -2790218 - AluSx SINE Alu -23 289 1 277 309 115 14 chr2 250466423 250466562 -2790021 + MIR SINE MIR 12 164 -98 247 369 119 4 chr2 250467093 250467337 -2789246 + L2 LINE L2 2382 2653 -661 1853 138 23 20 chr2 250469002 250469307 -2787276 + AluSg SINE Alu 1 306 -4 1817 133 3 51 chr2 250469818 250469990 -2786593 - AluJo SINE Alu -11 301 149 2212 110 0 0 chr2 250469990 250470289 -2786294 - AluSq SINE Alu -14 299 1 1817 133 3 51 chr2 250470289 250470432 -2786151 - AluJo SINE Alu -163 149 1 262 231 65 56 chr2 250471062 250471170 -2785413 - L2 LINE L2 -192 3080 2972 210 136 0 0 chr2 250471229 250471273 -2785310 + (GGGTG)n Simple_repeat Simple_repeat 3 46 0 1869 155 0 20 chr2 250477220 250477524 -2779059 + AluJo SINE Alu 1 298 -14 210 71 0 0 chr2 250477547 250477575 -2779008 + (CA)n Simple_repeat Simple_repeat 1 28 0 1123 88 0 0 chr2 250479466 250479614 -2776969 + AluSg/x SINE Alu 157 304 -8 293 314 41 0 chr2 250479784 250479905 -2776678 - L2 LINE L2 -518 2796 2671 200 311 14 0 chr2 250479980 250480076 -2776507 + L2 LINE L2 2894 2991 -322 235 271 0 0 chr2 250481507 250481555 -2775028 + C-rich Low_complexity Low_complexity 4 51 0 348 241 188 0 chr2 250482077 250482210 -2774373 - MIR SINE MIR -19 243 86 1451 130 0 26 chr2 250483504 250483734 -2772849 - AluJo SINE Alu -88 224 1 826 209 0 0 chr2 250483735 250483898 -2772685 - L1MC3 LINE L1 -94 7691 7529 284 167 0 0 chr2 250483900 250483948 -2772635 - L1MC3 LINE L1 -209 7576 7529 296 146 0 0 chr2 250483950 250483998 -2772585 - L1MC3 LINE L1 -209 7576 7529 290 163 0 0 chr2 250484062 250484111 -2772472 - L1MC3 LINE L1 -209 7576 7528 282 167 0 0 chr2 250484112 250484160 -2772423 - L1MC3 LINE L1 -209 7576 7529 301 250 26 0 chr2 250484195 250484271 -2772312 - L1MC3 LINE L1 -190 7595 7518 234 175 0 0 chr2 250484271 250484311 -2772272 - L1MC3 LINE L1 -218 7567 7528 508 231 17 0 chr2 250484345 250484462 -2772121 - L1MC3 LINE L1 -190 7595 7477 2147 67 92 0 chr2 250484570 250484853 -2771730 - AluSx SINE Alu -3 309 1 2933 185 18 9 chr2 250484898 250485444 -2771139 - L1MB2 LINE L1 -1 6170 5620 574 283 95 15 chr2 250485602 250485938 -2770645 - L1M4 LINE L1 -3311 2835 2473 241 360 47 0 chr2 250485949 250486185 -2770398 - L1M4 LINE L1 -3787 2359 2113 748 238 121 4 chr2 250487489 250487729 -2768854 + MER58B DNA MER1_type 44 311 -30 2068 111 3 0 chr2 250488492 250488780 -2767803 - AluSq SINE Alu -24 289 1 430 302 11 11 chr2 250490025 250490204 -2766379 + (CTGGGG)n Simple_repeat Simple_repeat 2 180 0 251 247 236 0 chr2 250490456 250490545 -2766038 + L2 LINE L2 3204 3313 0 240 263 16 70 chr2 250490588 250490774 -2765809 + GA-rich Low_complexity Low_complexity 3 178 0 377 127 92 6 chr2 250490788 250491109 -2765474 + (TGGA)n Simple_repeat Simple_repeat 1 348 0 248 132 74 16 chr2 250491142 250491263 -2765320 + (TGGA)n Simple_repeat Simple_repeat 1 128 0 400 155 75 40 chr2 250491282 250491456 -2765127 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 265 107 114 0 chr2 250491492 250491641 -2764942 + (TGGA)n Simple_repeat Simple_repeat 3 168 0 396 153 62 45 chr2 250491661 250491838 -2764745 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 191 300 43 0 chr2 250493591 250493661 -2762922 + MIR SINE MIR 61 133 -129 1902 117 18 0 chr2 250493661 250493935 -2762648 - AluJb SINE Alu -33 279 1 258 254 15 0 chr2 250494036 250494103 -2762480 - MIR SINE MIR -98 164 97 467 262 82 12 chr2 250495126 250495486 -2761097 - LTR40a LTR ERVL -1 503 57 387 248 56 32 chr2 250495549 250495674 -2760909 + MIR SINE MIR 20 147 -61 506 353 0 0 chr2 250496770 250497128 -2759455 + (TG)n Simple_repeat Simple_repeat 1 358 0 420 20 0 0 chr2 250498003 250498052 -2758531 + (GAGTG)n Simple_repeat Simple_repeat 4 52 0 433 225 10 0 chr2 250498199 250498714 -2757869 + (TG)n Simple_repeat Simple_repeat 1 520 0 428 204 6 0 chr2 250498779 250498955 -2757628 + (TG)n Simple_repeat Simple_repeat 2 178 0 392 214 6 0 chr2 250498968 250499146 -2757437 + (TG)n Simple_repeat Simple_repeat 2 180 0 417 189 8 12 chr2 250499189 250499439 -2757144 + (TG)n Simple_repeat Simple_repeat 1 249 0 456 238 246 6 chr2 250501507 250501855 -2754728 - L2 LINE L2 -209 3104 2674 338 290 76 0 chr2 250501934 250502065 -2754518 - MER3 DNA MER1_type -6 203 63 1438 89 0 5 chr2 250704072 250704262 -2552321 + AluSg SINE Alu 1 189 -121 7074 71 9 0 chr2 250704376 250705380 -2551203 + L1PA8 LINE L1 5161 6172 0 1939 178 8 17 chr2 250705387 250705741 -2550842 + L1MB5 LINE L1 5812 6162 -12 2102 174 3 0 chr2 250705841 250706226 -2550357 - L1MB3 LINE L1 -166 6017 5632 194 299 0 56 chr2 250707555 250707662 -2548921 - MIR SINE MIR -3 259 159 265 244 44 11 chr2 250707762 250707852 -2548731 - L1 LINE L1 -2597 3549 3457 306 296 36 77 chr2 250707874 250708070 -2548513 - L1ME4a LINE L1 -1 6120 5933 2186 115 0 0 chr2 250708076 250708371 -2548212 + AluSx SINE Alu 1 295 -17 366 323 65 48 chr2 250708766 250708995 -2547588 + MIR SINE MIR 28 260 -2 315 320 131 38 chr2 250709257 250709700 -2546883 + L2 LINE L2 2013 2496 -818 185 91 0 30 chr2 250711307 250711340 -2545243 + (CCCTG)n Simple_repeat Simple_repeat 3 34 0 572 236 137 102 chr2 250712079 250712591 -2543992 + MER74A LTR ERVL 14 543 -15 4371 84 3 3 chr2 250712672 250713253 -2543330 - SVA Other Other 0 1386 806 294 263 66 24 chr2 250714183 250714351 -2542232 - L2 LINE L2 -222 3050 2873 298 288 27 0 chr2 250714908 250715019 -2541564 - LTR16A LTR ERVL -66 384 271 229 364 67 12 chr2 250716083 250716248 -2540335 - L1ME4a LINE L1 -355 5766 5593 1888 139 20 17 chr2 250716399 250716701 -2539882 - AluJb SINE Alu -9 303 1 2407 156 44 10 chr2 250717779 250718190 -2538393 + MSTA LTR MaLR 3 427 -1 487 312 80 0 chr2 250718989 250719188 -2537395 + MLT1J LTR MaLR 1 215 -296 415 277 58 7 chr2 250719329 250719484 -2537099 + MER115 DNA AcHobo 517 679 -14 2126 100 7 0 chr2 250720234 250720537 -2536046 + AluSx SINE Alu 1 305 0 256 102 17 17 chr2 250720964 250721023 -2535560 + (CAAAA)n Simple_repeat Simple_repeat 3 61 0 534 288 63 27 chr2 250721039 250721338 -2535245 + L1MC5 LINE L1 7603 7912 -49 751 265 131 9 chr2 250721757 250722085 -2534498 + MLT1F LTR MaLR 175 542 0 306 0 0 0 chr2 250723323 250723357 -2533226 + (TAGA)n Simple_repeat Simple_repeat 4 37 0 207 0 0 0 chr2 250723771 250723794 -2532789 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 204 143 0 0 chr2 250724219 250724261 -2532322 + (TA)n Simple_repeat Simple_repeat 2 43 0 24 77 0 0 chr2 250726606 250726658 -2529925 + AT_rich Low_complexity Low_complexity 1 52 0 26 30 0 0 chr2 250726706 250726739 -2529844 + AT_rich Low_complexity Low_complexity 1 33 0 193 276 15 112 chr2 250729162 250729296 -2527287 + MIR3 SINE MIR 37 157 -51 2229 110 0 0 chr2 250730197 250730496 -2526087 + AluSx SINE Alu 1 299 -13 1496 252 106 30 chr2 250731045 250732011 -2524572 + L1MD3 LINE L1 6725 7989 -6 547 294 43 43 chr2 250732209 250732491 -2524092 + L1ME LINE L1 1398 1679 -4717 367 351 81 39 chr2 250732939 250733198 -2523385 + L1ME LINE L1 2025 2294 -4102 724 338 89 18 chr2 250733239 250734021 -2522562 + L1ME LINE L1 2293 3130 -3085 345 309 31 19 chr2 250734292 250734454 -2522129 + L1ME LINE L1 3435 3598 -2617 1697 219 119 19 chr2 250734684 250735113 -2521470 + MER70A LTR ERVL 1 472 0 319 369 78 19 chr2 250735167 250735373 -2521210 + L1ME LINE L1 5359 5576 -663 377 305 29 0 chr2 250735898 250736072 -2520511 + (TG)n Simple_repeat Simple_repeat 1 179 0 249 241 35 0 chr2 250736134 250736304 -2520279 + (TG)n Simple_repeat Simple_repeat 1 176 0 2430 46 0 13 chr2 250737961 250738266 -2518317 - AluY SINE Alu -10 301 1 7400 145 43 35 chr2 250745515 250745899 -2510684 - HSMAR2 DNA Mariner -2 1300 921 2089 122 10 0 chr2 250745899 250746194 -2510389 + AluSq SINE Alu 2 299 -14 7400 145 43 35 chr2 250746194 250747096 -2509487 - HSMAR2 DNA Mariner -381 921 3 446 291 64 45 chr2 250748122 250748342 -2508241 - MER58A DNA MER1_type 0 224 1 2540 51 0 3 chr2 250749704 250750015 -2506568 + AluY SINE Alu 1 310 -1 192 246 155 42 chr2 250752031 250752173 -2504410 + L2 LINE L2 2945 3102 -170 367 378 0 0 chr2 250754442 250754614 -2501969 + (CA)n Simple_repeat Simple_repeat 1 172 0 363 307 3 3 chr2 250754653 250754961 -2501622 + (CA)n Simple_repeat Simple_repeat 1 308 0 266 205 13 0 chr2 250759163 250759241 -2497342 + (CA)n Simple_repeat Simple_repeat 2 80 0 399 153 40 0 chr2 250759302 250759452 -2497131 + (CA)n Simple_repeat Simple_repeat 2 157 0 197 171 60 0 chr2 250759467 250759584 -2496999 + (CA)n Simple_repeat Simple_repeat 2 125 0 426 215 11 6 chr2 250759648 250759825 -2496758 + (CA)n Simple_repeat Simple_repeat 2 179 0 270 292 146 0 chr2 250763220 250763350 -2493233 + Charlie1a DNA MER1_type 14 162 -1293 377 269 42 0 chr2 250763393 250763512 -2493071 + Charlie1a DNA MER1_type 260 383 -1072 * 1725 203 192 55 chr2 250763503 250764064 -2492519 + Charlie1a DNA MER1_type 615 1303 -1458 2125 112 6 13 chr2 250764064 250764378 -2492205 - AluSx SINE Alu 0 312 1 1725 203 192 55 chr2 250764378 250764556 -2492027 + Charlie1a DNA MER1_type 1303 1455 0 183 80 0 0 chr2 250765178 250765203 -2491380 + (T)n Simple_repeat Simple_repeat 1 25 0 273 180 0 0 chr2 250765231 250765281 -2491302 + MER46A DNA MER2_type 1 50 -186 265 173 19 0 chr2 250765235 250765287 -2491296 - MER46A DNA MER2_type -96 140 88 * 817 161 0 0 chr2 250765290 250765414 -2491169 + AluJb SINE Alu 179 302 -10 1167 126 0 0 chr2 250765417 250765600 -2490983 + MER46A DNA MER2_type 54 236 0 2355 55 0 35 chr2 250766530 250766841 -2489742 + AluY SINE Alu 1 300 -11 1032 188 0 0 chr2 250766841 250767017 -2489566 + AluJb SINE Alu 134 309 -3 212 253 13 0 chr2 250767597 250767672 -2488911 + CT-rich Low_complexity Low_complexity 1 76 0 252 291 19 19 chr2 250770964 250771067 -2485516 - L2 LINE L2 -335 2978 2876 22 0 0 0 chr2 250771235 250771257 -2485326 + GC_rich Low_complexity Low_complexity 1 22 0 352 373 18 0 chr2 250774621 250774790 -2481793 - HAL1 LINE L1 -781 1726 1555 449 312 160 31 chr2 250774966 250775640 -2480943 - HAL1 LINE L1 -1248 1259 499 201 250 0 0 chr2 250776110 250776154 -2480429 + (TGAG)n Simple_repeat Simple_repeat 4 47 0 22 35 0 0 chr2 250777821 250777850 -2478733 + AT_rich Low_complexity Low_complexity 1 29 0 2123 112 7 3 chr2 250778982 250779286 -2477297 - AluSq SINE Alu -8 305 1 266 343 48 0 chr2 250784644 250784749 -2471834 - MIR SINE MIR -92 170 61 361 331 109 36 chr2 250784795 250785044 -2471539 + HAL1b LINE L1 1178 1346 -2 214 281 75 55 chr2 250786754 250786900 -2469683 - L2 LINE L2 -159 3113 2965 1880 114 40 0 chr2 250787699 250787817 -2468766 + AluSx SINE Alu 1 113 -199 251 27 0 27 chr2 250787817 250787854 -2468729 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 1880 114 40 0 chr2 250787854 250788007 -2468576 + AluSx SINE Alu 113 283 -29 181 362 168 13 chr2 250791497 250791795 -2464788 + L2 LINE L2 2854 3197 -75 198 0 0 0 chr2 250792322 250792344 -2464239 + (A)n Simple_repeat Simple_repeat 1 22 0 376 331 45 0 chr2 250793355 250793509 -2463074 + L1MA9 LINE L1 6147 6307 -5 315 270 0 0 chr2 250795096 250795270 -2461313 + (CA)n Simple_repeat Simple_repeat 1 174 0 322 318 0 0 chr2 250795320 250795408 -2461175 + G-rich Low_complexity Low_complexity 5 92 0 1550 131 162 4 chr2 250795752 250796011 -2460572 - AluJb SINE Alu -1 301 2 1199 245 68 8 chr2 250798890 250799257 -2457326 - L1MB7 LINE L1 -9 6175 5787 259 333 29 58 chr2 250799796 250799865 -2456718 - L1MB7 LINE L1 -417 5761 5692 2300 186 36 2 chr2 250799865 250800279 -2456304 + MSTA LTR MaLR 1 428 0 259 333 29 58 chr2 250800279 250800416 -2456167 - L1MB7 LINE L1 -486 5692 5561 236 238 0 0 chr2 250801220 250801283 -2455300 + (CTG)n Simple_repeat Simple_repeat 1 63 0 1839 116 70 0 chr2 250803019 250803303 -2453280 + AluSx SINE Alu 1 304 -8 231 264 0 0 chr2 250804060 250804113 -2452470 + Charlie2 DNA MER1_type 1972 2024 -838 207 216 175 0 chr2 250805374 250805471 -2451112 + L2 LINE L2 2938 3051 -221 250 297 139 0 chr2 250806539 250806640 -2449943 + MER3 DNA MER1_type 93 207 -2 295 281 30 37 chr2 250806934 250807069 -2449514 - MIR SINE MIR -68 194 61 2183 102 0 0 chr2 250808226 250808521 -2448062 - AluSx SINE Alu -17 295 1 1225 115 26 10 chr2 250809821 250810013 -2446570 + L1MA2 LINE L1 6110 6304 0 418 270 80 45 chr2 250810231 250810431 -2446152 + L1ME LINE L1 5456 5662 -459 192 237 0 0 chr2 250810828 250810866 -2445717 + L2 LINE L2 3273 3310 -3 1530 155 4 0 chr2 250810980 250811238 -2445345 - L1MA4 LINE L1 -329 5971 5713 1069 239 27 7 chr2 250811249 250811542 -2445041 + L1 LINE L1 5097 5395 -751 399 338 35 0 chr2 250815744 250815889 -2440694 - MIR SINE MIR -34 228 79 282 125 0 0 chr2 250821441 250821489 -2435094 + (TCCCC)n Simple_repeat Simple_repeat 2 49 0 418 287 30 42 chr2 250822964 250823131 -2433452 + HAL1 LINE L1 1051 1215 -1292 314 323 143 21 chr2 250823263 250823542 -2433041 + HAL1 LINE L1 1473 1785 -722 300 317 145 7 chr2 250823625 250823770 -2432813 + HAL1 LINE L1 1982 2146 -361 1623 114 114 0 chr2 250823874 250824162 -2432421 + AluSx SINE Alu 1 317 0 23 0 0 0 chr2 250824866 250824889 -2431694 + AT_rich Low_complexity Low_complexity 1 23 0 471 221 3 0 chr2 250824959 250825263 -2431320 + (CA)n Simple_repeat Simple_repeat 1 305 0 507 319 33 0 chr2 250827636 250827818 -2428765 - MIR SINE MIR -39 223 36 194 332 4 7 chr2 250829131 250829228 -2427355 - MIR SINE MIR -63 145 49 29 47 0 0 chr2 250833130 250833173 -2423410 + AT_rich Low_complexity Low_complexity 1 43 0 239 256 28 33 chr2 250833704 250833884 -2422699 + (CA)n Simple_repeat Simple_repeat 1 179 0 275 256 19 38 chr2 250834004 250834164 -2422419 + C-rich Low_complexity Low_complexity 2 158 0 * 313 217 43 37 chr2 250834148 250834309 -2422274 + (CCCA)n Simple_repeat Simple_repeat 4 165 0 * 367 273 6 33 chr2 250834211 250834394 -2422189 + C-rich Low_complexity Low_complexity 2 179 0 997 255 60 20 chr2 250834853 250835155 -2421428 - MER33 DNA MER1_type -8 316 3 1436 285 68 31 chr2 250835264 250836279 -2420304 - L1ME2 LINE L1 -188 5976 4915 1731 179 0 7 chr2 250839695 250840002 -2416581 + AluJb SINE Alu 1 305 -7 217 243 14 29 chr2 250842670 250842740 -2413843 + (CGGGG)n Simple_repeat Simple_repeat 3 71 0 311 321 49 111 chr2 250844810 250845215 -2411368 + L1MEc LINE L1 2010 2389 -4007 701 296 153 21 chr2 250846026 250847048 -2409535 + L1MEc LINE L1 971 2174 -4222 234 0 0 0 chr2 250847048 250847074 -2409509 + (TA)n Simple_repeat Simple_repeat 2 27 0 701 296 153 21 chr2 250847074 250847242 -2409341 + L1MEc LINE L1 2174 2318 -4078 * 2067 308 58 37 chr2 250847227 250848819 -2407764 + L1MEc LINE L1 3022 4682 -1533 1811 280 74 20 chr2 250848838 250849739 -2406844 + L1MEc LINE L1 5102 6065 -174 380 267 17 12 chr2 250850917 250851138 -2405445 + CT-rich Low_complexity Low_complexity 1 222 0 289 258 0 23 chr2 250851194 250851322 -2405261 + (CTG)n Simple_repeat Simple_repeat 3 127 0 935 264 49 16 chr2 250851634 250851941 -2404642 + L1ME2 LINE L1 5539 5855 -309 233 286 0 0 chr2 250852103 250852159 -2404424 + MER2 DNA MER2_type 289 344 -1 374 296 100 35 chr2 250852161 250852391 -2404192 + L1ME2 LINE L1 5919 6163 -1 1327 184 92 7 chr2 250853029 250853300 -2403283 - AluJo SINE Alu -16 296 3 725 211 0 8 chr2 250853305 250853438 -2403145 - FLAM_C SINE Alu -1 132 1 1817 172 9 40 chr2 250854030 250854378 -2402205 + MER1B DNA MER1_type 1 337 0 253 312 129 35 chr2 250856398 250856600 -2399983 + MIR SINE MIR 6 226 -36 243 0 0 0 chr2 250858824 250858851 -2397732 + (A)n Simple_repeat Simple_repeat 1 27 0 1726 154 7 20 chr2 250860503 250860809 -2395774 + AluSx SINE Alu 1 302 -10 22 35 0 0 chr2 250860986 250861015 -2395568 + AT_rich Low_complexity Low_complexity 1 29 0 378 240 153 0 chr2 250863326 250863449 -2393134 + MER33 DNA MER1_type 1 128 -86 * 1146 207 196 46 chr2 250863441 250863833 -2392750 + MLT1F1 LTR MaLR 111 561 -6 248 200 0 100 chr2 250863852 250863942 -2392641 + MER33 DNA MER1_type 283 363 0 305 229 152 19 chr2 250864151 250864256 -2392327 - L1ME4a LINE L1 -1 6120 6002 204 151 38 57 chr2 250868146 250868199 -2388384 - L2 LINE L2 -2 3270 3219 1540 323 58 32 chr2 250871766 250872587 -2383996 - HAL1 LINE L1 -698 1809 967 324 0 0 0 chr2 250872602 250872638 -2383945 + (TG)n Simple_repeat Simple_repeat 1 36 0 1431 149 39 8 chr2 250872643 250872898 -2383685 - AluSx SINE Alu -47 265 3 273 362 53 30 chr2 250872901 250873205 -2383378 - HAL1 LINE L1 -1586 921 611 278 303 46 13 chr2 250873369 250873521 -2383062 - HAL1 LINE L1 -2259 248 92 462 291 156 21 chr2 250873687 250874020 -2382563 - L1MC5 LINE L1 -279 7682 7305 469 285 150 57 chr2 250874084 250874487 -2382096 - L1MC5 LINE L1 -746 7215 6754 2342 62 0 16 chr2 250874487 250874792 -2381791 - AluY SINE Alu -11 300 1 469 285 150 57 chr2 250874792 250874894 -2381689 - L1MC5 LINE L1 -1207 6754 6663 321 235 78 20 chr2 250875844 250875946 -2380637 - MIR SINE MIR -117 145 38 223 311 11 44 chr2 250879844 250879934 -2376649 - MIR SINE MIR -175 87 1 395 223 16 26 chr2 250879943 250880075 -2376508 + L1ME3A LINE L1 1300 1495 -4877 262 138 35 0 chr2 250880416 250880474 -2376109 + GA-rich Low_complexity Low_complexity 3 62 0 1738 161 3 0 chr2 250880810 250881095 -2375488 + AluJb SINE Alu 10 295 -17 243 146 0 0 chr2 250881132 250881173 -2375410 + (CA)n Simple_repeat Simple_repeat 2 42 0 1140 244 33 72 chr2 250881186 250881731 -2374852 + L1MC5 LINE L1 7248 7771 -190 425 319 142 29 chr2 250881893 250882795 -2373788 + L1ME3A LINE L1 3101 3900 -2482 2428 54 0 16 chr2 250882795 250883111 -2373472 + AluY SINE Alu 1 311 0 425 319 142 29 chr2 250883111 250883640 -2372943 + L1ME3A LINE L1 3900 4723 -1659 1682 161 20 27 chr2 250883640 250883939 -2372644 - AluJb SINE Alu -15 297 1 425 319 142 29 chr2 250883939 250884058 -2372525 + L1ME3A LINE L1 4723 4827 -1555 566 288 87 41 chr2 250884155 250884548 -2372035 + L1ME3A LINE L1 5112 5522 -860 430 288 124 31 chr2 250884824 250885081 -2371502 + L1ME3A LINE L1 5855 6135 -271 369 170 50 60 chr2 250887622 250887722 -2368861 + HAL1 LINE L1 803 901 -1606 294 217 60 12 chr2 250888665 250888748 -2367835 - MIR SINE MIR -116 146 60 1891 247 36 16 chr2 250888782 250889276 -2367307 - MLT1D LTR MaLR -1 504 1 236 344 57 13 chr2 250889276 250889433 -2367150 - L2 LINE L2 -623 2691 2528 796 289 165 23 chr2 250889548 250890118 -2366465 - L2 LINE L2 -771 2543 1893 304 235 0 29 chr2 250890625 250890693 -2365890 + L1ME LINE L1 5553 5618 -503 261 333 0 0 chr2 250890927 250891008 -2365575 + (CATA)n Simple_repeat Simple_repeat 4 84 0 1687 190 0 10 chr2 250892562 250892872 -2363711 + AluJb SINE Alu 1 307 -5 7194 22 1 0 chr2 250893006 250894413 -2362170 + L1PA3 LINE L1 4774 6181 0 522 278 96 54 chr2 250894894 250895223 -2361360 + L1M4 LINE L1 2794 3150 -2996 371 240 78 26 chr2 250895559 250895713 -2360870 - L1MD2 LINE L1 -1 6358 6197 349 325 154 0 chr2 250895781 250895969 -2360614 - L1MDa LINE L1 -4219 2321 2105 387 0 0 0 chr2 250896365 250896408 -2360175 + (CA)n Simple_repeat Simple_repeat 2 44 0 180 0 0 0 chr2 250897290 250897310 -2359273 + (A)n Simple_repeat Simple_repeat 1 20 0 206 302 81 0 chr2 250898226 250898312 -2358271 - MER5A DNA MER1_type -3 186 94 693 281 139 17 chr2 250898715 250899184 -2357399 + L2 LINE L2 2244 2769 -545 223 259 19 76 chr2 250899227 250899385 -2357198 + L2 LINE L2 2990 3138 -175 195 42 0 0 chr2 250899505 250899529 -2357054 + (TGAA)n Simple_repeat Simple_repeat 4 27 0 240 287 89 87 chr2 250899632 250900217 -2356366 + L1M4 LINE L1 2620 3205 -2941 358 338 81 3 chr2 250901644 250901940 -2354643 + HAL1 LINE L1 2 320 -2187 230 295 83 92 chr2 250903461 250903615 -2352968 - MARNA DNA Mariner -202 384 231 2266 100 0 31 chr2 250903615 250903934 -2352649 + AluSx SINE Alu 1 309 -3 230 295 83 92 chr2 250903934 250903996 -2352587 - MARNA DNA Mariner -355 231 170 4335 137 105 17 chr2 250904219 250905049 -2351534 - MER4D LTR ERV1 0 903 1 198 0 0 0 chr2 250905124 250905146 -2351437 + (A)n Simple_repeat Simple_repeat 1 22 0 232 128 0 0 chr2 250906923 250906962 -2349621 + L1ME4a LINE L1 6078 6116 -5 324 273 55 36 chr2 250907085 250907250 -2349333 + L2 LINE L2 1301 1468 -1846 22 35 0 0 chr2 250907918 250907947 -2348636 + AT_rich Low_complexity Low_complexity 1 29 0 1117 151 30 43 chr2 250908055 250908287 -2348296 + MER46A DNA MER2_type 8 236 0 299 314 66 0 chr2 250909340 250909461 -2347122 - MIR SINE MIR -74 188 60 2313 95 3 3 chr2 250910512 250910806 -2345777 + AluSx SINE Alu 1 294 -18 38 39 0 0 chr2 250912959 250913011 -2343572 + AT_rich Low_complexity Low_complexity 1 52 0 201 121 0 0 chr2 250913051 250913084 -2343499 + (TATG)n Simple_repeat Simple_repeat 2 34 0 967 233 110 12 chr2 250913820 250914162 -2342421 - MER21B LTR ERV1 -110 821 433 294 274 88 0 chr2 250914156 250914269 -2342314 - MER21B LTR ERV1 -643 220 98 * 254 274 16 0 chr2 250914323 250914385 -2342198 - MER21B LTR ERV1 -781 82 20 456 318 145 13 chr2 250916083 250916576 -2340007 - L1M4 LINE L1 -719 5459 4881 275 343 42 6 chr2 250916636 250916802 -2339781 - L1M4 LINE L1 -1362 4784 4613 709 132 40 7 chr2 250916806 250916958 -2339625 + GA-rich Low_complexity Low_complexity 2 158 0 185 258 15 0 chr2 250916942 250917008 -2339575 + G-rich Low_complexity Low_complexity 2 68 0 * 1157 293 151 10 chr2 250917022 250917718 -2338865 - L1M4 LINE L1 -1550 4596 3803 2405 71 0 3 chr2 250917905 250918202 -2338381 - AluY SINE Alu -15 296 1 908 237 95 55 chr2 250918422 250918802 -2337781 - L1MC3 LINE L1 -1 7784 7390 416 316 148 50 chr2 250920117 250920475 -2336108 + L1MC5 LINE L1 7521 7913 -48 2357 78 3 3 chr2 250922934 250923229 -2333354 - AluY SINE Alu -16 295 1 204 269 62 92 chr2 250923365 250923495 -2333088 - MIR SINE MIR -5 257 132 382 293 79 0 chr2 250923802 250923966 -2332617 - L2 LINE L2 -233 3080 2904 1585 161 94 7 chr2 250926059 250926345 -2330238 + AluJo SINE Alu 1 311 -1 506 305 110 54 chr2 250928616 250929824 -2326759 + L1MEd LINE L1 270 1634 -856 279 0 0 0 chr2 250930043 250930074 -2326509 + (TG)n Simple_repeat Simple_repeat 2 32 0 401 343 42 49 chr2 250932405 250932670 -2323913 + L1MEd LINE L1 962 1224 -5306 335 262 115 8 chr2 250932851 250932973 -2323610 + L1MEd LINE L1 1315 1449 -5081 243 290 12 93 chr2 250933171 250933333 -2323250 + L1MEd LINE L1 1763 1911 -4629 532 282 8 54 chr2 250933565 250933806 -2322777 + L1MEd LINE L1 2534 2763 -3777 1899 149 19 7 chr2 250933913 250934221 -2322362 + AluJb SINE Alu 1 312 0 245 250 48 12 chr2 250934265 250934349 -2322234 + L1MEd LINE L1 3335 3421 -3119 423 329 37 6 chr2 250934372 250934533 -2322050 + L1MEd LINE L1 3490 3655 -2885 604 274 87 14 chr2 250934994 250935202 -2321381 + MIR SINE MIR 3 225 -37 290 193 0 18 chr2 250935820 250935877 -2320706 - FLAM SINE Alu -1 132 77 205 196 0 20 chr2 250943861 250943912 -2312671 + (CATA)n Simple_repeat Simple_repeat 1 50 0 666 189 0 0 chr2 250943915 250944095 -2312488 + (CA)n Simple_repeat Simple_repeat 1 180 0 1852 167 0 42 chr2 250945859 250946170 -2310413 - AluJb SINE Alu -14 298 1 184 243 0 0 chr2 250946353 250946390 -2310193 - MIR SINE MIR -94 168 132 1159 188 46 13 chr2 250947009 250947400 -2309183 + L1M4 LINE L1 5087 5484 -690 449 232 72 14 chr2 250947741 250947879 -2308704 + MLT1D LTR MaLR 4 149 -356 639 257 120 95 chr2 250947879 250948330 -2308253 + L1MC5 LINE L1 6773 7234 -727 423 332 104 45 chr2 250948359 250948735 -2307848 + L1MC5 LINE L1 7290 7687 -274 194 289 56 56 chr2 250951842 250951932 -2304651 + L2 LINE L2 3163 3252 -20 228 233 6 72 chr2 250952629 250952809 -2303774 + (CCCCAG)n Simple_repeat Simple_repeat 6 173 0 1635 162 22 0 chr2 250953151 250953429 -2303154 + AluSx SINE Alu 14 297 -15 508 203 106 24 chr2 250953612 250953735 -2302848 + FLAM_A SINE Alu 1 133 0 391 320 102 0 chr2 250954113 250954260 -2302323 - MIR SINE MIR -80 182 21 247 244 64 18 chr2 250955497 250955735 -2300848 + (CACTA)n Simple_repeat Simple_repeat 1 248 0 262 241 72 0 chr2 250955956 250956122 -2300461 + (CACTA)n Simple_repeat Simple_repeat 1 178 0 349 252 67 0 chr2 250956172 250956507 -2300076 + (CACTA)n Simple_repeat Simple_repeat 1 357 0 366 236 62 0 chr2 250956535 250956820 -2299763 + (CACTA)n Simple_repeat Simple_repeat 1 302 0 216 272 63 0 chr2 250956940 250957098 -2299485 + (CACTA)n Simple_repeat Simple_repeat 5 172 0 262 243 59 18 chr2 250957135 250957304 -2299279 + (CACTA)n Simple_repeat Simple_repeat 3 178 0 202 308 95 53 chr2 250957634 250957803 -2298780 - L2 LINE L2 -262 3051 2876 503 262 89 0 chr2 250957925 250958093 -2298490 + MER63 DNA MER1_type 809 991 -69 361 272 68 43 chr2 250959383 250959545 -2297038 - MER115 DNA AcHobo -29 664 499 393 338 126 52 chr2 250960533 250961279 -2295304 + L1M4c LINE L1 907 1638 -4744 1302 243 69 8 chr2 250961492 250961867 -2294716 - L1MC3 LINE L1 -115 7670 7273 535 343 102 20 chr2 250961875 250962448 -2294135 + L1M4c LINE L1 3173 3834 -2548 714 287 159 35 chr2 250962457 250963292 -2293291 + L1M4c LINE L1 3899 4837 -1545 458 250 0 17 chr2 250964971 250965151 -2291432 + (CA)n Simple_repeat Simple_repeat 1 177 0 195 129 0 0 chr2 250966413 250966444 -2290139 + (CAGCC)n Simple_repeat Simple_repeat 3 33 0 180 322 111 0 chr2 250968702 250968792 -2287791 - L2 LINE L2 -559 2755 2656 242 284 69 0 chr2 250969146 250969248 -2287335 + MIR SINE MIR 111 219 -43 2679 26 0 0 chr2 250969415 250969725 -2286858 + AluYa5 SINE Alu 1 310 -1 390 303 77 14 chr2 250970359 250970567 -2286016 - MIR SINE MIR -34 228 8 253 250 0 0 chr2 250970597 250970645 -2285938 + (CACG)n Simple_repeat Simple_repeat 3 50 0 236 211 53 13 chr2 250971358 250971434 -2285149 + Charlie7 DNA MER1_type 44 122 -2490 2412 53 17 0 chr2 250973253 250973554 -2283029 - AluY SINE Alu -5 306 1 439 232 169 73 chr2 250974694 250974738 -2281845 - MER3 DNA MER1_type -1 208 170 180 0 0 0 chr2 250974738 250974758 -2281825 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 439 232 169 73 chr2 250974758 250974890 -2281693 - MER3 DNA MER1_type -39 170 15 1723 167 7 13 chr2 250975859 250976164 -2280419 - AluJo SINE Alu 0 312 10 334 294 56 0 chr2 250978423 250978549 -2278034 + MIR SINE MIR 23 155 -107 23 33 0 0 chr2 250979964 250979994 -2276589 + AT_rich Low_complexity Low_complexity 1 30 0 239 191 0 0 chr2 250982515 250982562 -2274021 + MIR SINE MIR 101 147 -61 182 339 83 9 chr2 250986250 250986359 -2270224 + MIR3 SINE MIR 88 204 -4 226 326 131 17 chr2 250988412 250988587 -2267996 + L1ME3A LINE L1 450 644 -5475 319 298 40 40 chr2 250988736 250988860 -2267723 + MIR SINE MIR 32 155 -107 508 252 36 69 chr2 250988959 250989181 -2267402 + L1ME3A LINE L1 902 1115 -5004 3964 115 37 5 chr2 250989181 250989772 -2266811 + MER4B LTR ERV1 1 610 0 508 252 36 69 chr2 250989772 250989823 -2266760 + L1ME3A LINE L1 1115 1166 -4953 360 322 70 37 chr2 250990008 250990464 -2266119 + L1ME3A LINE L1 4844 5314 -815 357 335 97 10 chr2 250990485 250990691 -2265892 + L1ME3A LINE L1 5416 5639 -2152 1470 152 0 35 chr2 250990703 250990959 -2265624 + AluJo SINE Alu 4 250 -62 1386 263 205 35 chr2 250991157 250992103 -2264480 + L1MC4 LINE L1 6043 7132 -910 618 178 115 63 chr2 250992107 250992298 -2264285 + MER6B DNA MER2_type 6 206 -4 232 111 111 19 chr2 250992335 250992389 -2264194 + MER6B DNA MER2_type 148 206 -4 1281 272 203 19 chr2 250992396 250993164 -2263419 + L1MC4 LINE L1 7134 8042 0 282 270 73 11 chr2 250994061 250994239 -2262344 + L1ME3A LINE L1 5746 5934 -219 26 0 0 0 chr2 250994423 250994449 -2262134 + AT_rich Low_complexity Low_complexity 1 26 0 2201 78 3 0 chr2 250994503 250994787 -2261796 + AluSq SINE Alu 20 304 -9 356 370 59 40 chr2 250995291 250995564 -2261019 - L1M4 LINE L1 -2241 3905 3628 2480 58 0 0 chr2 250995567 250995875 -2260708 + AluY SINE Alu 1 308 -3 1443 164 164 10 chr2 250996274 250996586 -2259997 - MER51A LTR ERV1 -17 617 258 502 245 14 56 chr2 250996736 250996879 -2259704 + MIR SINE MIR 89 225 -37 341 276 45 22 chr2 250996946 250997080 -2259503 + L2 LINE L2 3136 3272 0 234 253 86 99 chr2 250997399 250997561 -2259022 + L1ME LINE L1 5614 5773 -348 220 189 0 0 chr2 250997636 250997673 -2258910 + GA-rich Low_complexity Low_complexity 1 37 0 4144 193 35 17 chr2 250999384 251000066 -2256517 + L1MB4 LINE L1 4900 5625 -555 2066 122 24 3 chr2 251000066 251000361 -2256222 + AluSx SINE Alu 1 301 -11 4144 193 35 17 chr2 251000361 251000928 -2255655 + L1MB4 LINE L1 5625 6180 0 191 231 0 0 chr2 251002488 251002527 -2254056 + L2 LINE L2 3275 3313 0 280 275 12 12 chr2 251004192 251004272 -2252311 - MIR SINE MIR -70 192 113 1348 282 81 42 chr2 251006351 251007543 -2249040 + L1ME3A LINE L1 2367 3605 -2541 712 259 33 33 chr2 251007547 251007759 -2248824 + MER58C DNA MER1_type 1 212 -3 1828 270 125 40 chr2 251007763 251008057 -2248526 + L1ME3A LINE L1 3603 3871 -2299 343 210 0 12 chr2 251008057 251008138 -2248445 - MER116 DNA Mariner 0 80 1 1828 270 125 40 chr2 251008138 251008617 -2247966 + L1ME3A LINE L1 3871 4308 -1862 2180 131 0 3 chr2 251008617 251008922 -2247661 + AluSx SINE Alu 1 304 -8 1828 270 125 40 chr2 251008922 251009120 -2247463 + L1ME3A LINE L1 4308 4488 -1682 2414 72 0 10 chr2 251009120 251009424 -2247159 + AluY SINE Alu 1 301 -10 1828 270 125 40 chr2 251009424 251010767 -2245816 + L1ME3A LINE L1 4488 6165 -5 328 271 83 87 chr2 251010786 251011015 -2245568 + L1MC4a LINE L1 5696 5923 -1885 1532 203 16 64 chr2 251011042 251011495 -2245088 - L1MC3 LINE L1 -46 7739 7309 1879 212 22 3 chr2 251016175 251016533 -2240050 + MLT1A1 LTR MaLR 1 365 0 30 0 0 0 chr2 251016585 251016615 -2239968 + AT_rich Low_complexity Low_complexity 1 30 0 1408 152 46 53 chr2 251019643 251019926 -2236657 + AluJb SINE Alu 1 281 -31 293 141 14 0 chr2 251019927 251019998 -2236585 + (CA)n Simple_repeat Simple_repeat 2 73 0 229 216 7 22 chr2 251020050 251020189 -2236394 + (CA)n Simple_repeat Simple_repeat 2 138 0 189 178 0 0 chr2 251020214 251020259 -2236324 + (CA)n Simple_repeat Simple_repeat 1 45 0 339 218 23 15 chr2 251020398 251020531 -2236052 + (CA)n Simple_repeat Simple_repeat 2 135 0 426 278 12 0 chr2 251020542 251020711 -2235872 + (CA)n Simple_repeat Simple_repeat 2 172 0 287 188 23 8 chr2 251020855 251020983 -2235600 + (CA)n Simple_repeat Simple_repeat 2 131 0 368 174 5 114 chr2 251021041 251021242 -2235341 + (CA)n Simple_repeat Simple_repeat 2 180 0 430 223 0 72 chr2 251021273 251021466 -2235117 + (CA)n Simple_repeat Simple_repeat 2 180 0 2205 108 3 3 chr2 251021869 251022165 -2234418 - AluSx SINE Alu -16 296 1 381 303 118 53 chr2 251024386 251024710 -2231873 + L1M4 LINE L1 2202 2543 -3603 26 0 0 0 chr2 251024831 251024857 -2231726 + AT_rich Low_complexity Low_complexity 1 26 0 2219 111 3 0 chr2 251024865 251025153 -2231430 - AluSc SINE Alu -20 289 1 335 311 98 34 chr2 251025286 251025635 -2230948 + L1MC/D LINE L1 5384 5750 -429 248 277 148 20 chr2 251026454 251026555 -2230028 + MIR3 SINE MIR 71 184 -24 2120 104 0 37 chr2 251027362 251027661 -2228922 - AluSx SINE Alu -20 292 5 835 245 24 19 chr2 251027791 251028003 -2228580 - MER20 DNA MER1_type 0 219 7 305 333 25 0 chr2 251028508 251028628 -2227955 - L1ME4a LINE L1 -218 5903 5781 252 0 0 0 chr2 251028913 251028941 -2227642 + (T)n Simple_repeat Simple_repeat 1 28 0 410 328 81 79 chr2 251029173 251029640 -2226943 - HAL1 LINE L1 -815 1692 1225 22 0 0 0 chr2 251030505 251030527 -2226056 + AT_rich Low_complexity Low_complexity 1 22 0 387 222 67 0 chr2 251030647 251030737 -2225846 + L1ME3A LINE L1 2230 2325 -4071 2214 209 103 120 chr2 251030845 251031952 -2224631 + L1ME3A LINE L1 2280 3364 -2851 2225 127 0 16 chr2 251031952 251032268 -2224315 + AluJb SINE Alu 1 311 -1 2214 209 103 120 chr2 251032268 251032407 -2224176 + L1ME3A LINE L1 3364 3504 -2711 1772 271 103 58 chr2 251032466 251033399 -2223184 - L1MC4a LINE L1 -685 7123 6149 183 271 21 0 chr2 251033802 251033850 -2222733 - L2 LINE L2 -536 2778 2730 239 329 21 57 chr2 251035065 251035205 -2221378 + MIR3 SINE MIR 20 154 -54 2180 305 93 19 chr2 251037072 251039005 -2217578 + L1ME3A LINE L1 4118 6231 -8 21 79 0 34 chr2 251039324 251039413 -2217170 + AT_rich Low_complexity Low_complexity 1 86 0 1060 248 153 13 chr2 251041430 251041802 -2214781 + Charlie1b DNA MER1_type 1 450 -2311 1817 159 48 23 chr2 251041802 251042025 -2214558 + MER46B DNA MER2_type 1 114 -2617 1881 111 63 15 chr2 251042025 251042323 -2214260 + AluSx SINE Alu 1 311 0 1817 159 48 23 chr2 251042323 251042450 -2214133 + MER46B DNA MER2_type 114 236 0 1060 248 153 13 chr2 251042450 251042533 -2214050 + Charlie1b DNA MER1_type 450 520 -3 499 290 0 0 chr2 251045556 251045832 -2210751 + (CA)n Simple_repeat Simple_repeat 1 276 0 183 255 0 0 chr2 251045889 251045995 -2210588 + (CA)n Simple_repeat Simple_repeat 2 107 0 218 250 14 0 chr2 251047107 251047179 -2209404 + (CA)n Simple_repeat Simple_repeat 1 73 0 362 424 72 9 chr2 251047238 251047769 -2208814 - L1MC4a LINE L1 -1981 5827 5264 1803 121 19 0 chr2 251047772 251048036 -2208547 - AluSx SINE Alu 0 312 44 902 150 12 36 chr2 251054145 251054312 -2202271 + L1MB2 LINE L1 6007 6169 -2 750 194 112 0 chr2 251055271 251055441 -2201142 - MER20 DNA MER1_type -1 218 30 2003 116 0 17 chr2 251056318 251056620 -2199963 - AluSq SINE Alu -8 305 9 1592 183 0 19 chr2 251057930 251058247 -2198336 + AluJo SINE Alu 1 311 -1 234 238 32 0 chr2 251058632 251058695 -2197888 - HAL1 LINE L1 -54 2453 2389 232 321 8 30 chr2 251060602 251060736 -2195847 + (CGTG)n Simple_repeat Simple_repeat 1 131 0 197 388 49 27 chr2 251061211 251061394 -2195189 - MIR SINE MIR -68 194 8 1424 73 227 0 chr2 251062611 251062831 -2193752 + LTR12 LTR ERV1 1 270 -444 374 234 42 0 chr2 251062831 251062937 -2193646 + LTR30 LTR ERV1 544 643 -79 1493 133 36 0 chr2 251062937 251063162 -2193421 + LTR12 LTR ERV1 480 712 -2 315 317 74 40 chr2 251063420 251063622 -2192961 + MLT1K LTR MaLR 137 345 -243 1416 184 3 74 chr2 251063846 251064156 -2192427 + AluJb SINE Alu 1 288 -24 219 69 0 0 chr2 251068385 251068414 -2188169 + (TTCA)n Simple_repeat Simple_repeat 3 31 0 282 386 70 8 chr2 251068650 251068973 -2187610 - L2 LINE L2 -274 2998 2655 251 308 60 15 chr2 251069377 251069510 -2187073 - L1ME LINE L1 -399 5722 5584 1640 170 7 4 chr2 251069591 251069868 -2186715 - AluJb SINE Alu -34 278 1 22 0 0 0 chr2 251069869 251069891 -2186692 + AT_rich Low_complexity Low_complexity 1 22 0 351 288 34 0 chr2 251069924 251070042 -2186541 - MIR SINE MIR 0 262 141 338 316 87 52 chr2 251070125 251070356 -2186227 - L1ME LINE L1 -786 5360 5122 37 81 0 0 chr2 251073893 251073979 -2182604 + GC_rich Low_complexity Low_complexity 1 86 0 270 256 0 41 chr2 251074067 251074239 -2182344 + CT-rich Low_complexity Low_complexity 2 166 0 22 35 0 0 chr2 251074700 251074729 -2181854 + GC_rich Low_complexity Low_complexity 1 29 0 814 238 156 35 chr2 251077563 251077903 -2178680 + L1ME2 LINE L1 5751 6131 -33 26 0 0 0 chr2 251078671 251078697 -2177886 + AT_rich Low_complexity Low_complexity 1 26 0 1743 86 22 0 chr2 251078864 251079096 -2177487 - L1PA5 LINE L1 0 6154 5918 1469 56 5 0 chr2 251079100 251079295 -2177288 + L1PA5 LINE L1 5707 5902 -252 250 252 61 61 chr2 251079817 251079948 -2176635 - LTR16C LTR ERVL -3 488 358 913 203 6 0 chr2 251080483 251080660 -2175923 - Tigger5 DNA MER2_type -60 2263 2086 611 313 92 14 chr2 251080829 251081306 -2175277 - MER115 DNA AcHobo 0 693 164 190 244 44 0 chr2 251081636 251081681 -2174902 - MIR SINE MIR 0 262 216 2331 69 0 0 chr2 251081741 251082030 -2174553 + AluY SINE Alu 1 289 -22 323 305 50 35 chr2 251082426 251082567 -2174016 + L1ME1 LINE L1 423 565 -5965 1134 235 84 118 chr2 251082621 251083378 -2173205 + L1ME1 LINE L1 745 1476 -5054 570 234 85 139 chr2 251083439 251083850 -2172733 + LTR16A1 LTR ERVL 69 457 0 340 388 69 4 chr2 251083859 251084104 -2172479 + L1ME1 LINE L1 1588 1848 -4873 986 204 0 15 chr2 251084119 251084315 -2172268 - AluJo SINE Alu -2 310 118 384 370 35 0 chr2 251084857 251085057 -2171526 + HERV16 LTR ERVL 990 1196 -3800 316 336 61 32 chr2 251085215 251085527 -2171056 + HERV16 LTR ERVL 1456 1776 -3878 306 302 43 0 chr2 251085574 251085690 -2170893 + HERV16 LTR ERVL 1892 2012 -3752 1781 191 121 79 chr2 251085760 251086255 -2170328 - MLT1E1 LTR MaLR 0 654 132 1772 249 99 4 chr2 251086255 251086748 -2169835 + MER34 LTR ERV1 1 540 -2 1781 191 121 79 chr2 251086748 251086798 -2169785 - MLT1E1 LTR MaLR -522 132 86 1995 122 0 3 chr2 251087048 251087356 -2169227 - AluSx SINE Alu 0 307 1 276 279 86 93 chr2 251087390 251087530 -2169053 + HERV16 LTR ERVL 2125 2263 -2733 570 313 68 40 chr2 251087865 251088644 -2167939 + L1ME1 LINE L1 2457 3254 -3286 * 778 332 98 26 chr2 251088617 251088875 -2167708 + L1ME1 LINE L1 4637 4875 -1665 725 186 16 77 chr2 251088875 251089058 -2167525 + MER104 DNA MER2_type 5 176 -4 778 332 98 26 chr2 251089058 251089645 -2166938 + L1ME1 LINE L1 4875 5543 -997 760 240 12 72 chr2 251089646 251089896 -2166687 + L1ME1 LINE L1 5783 6017 -543 2049 102 33 51 chr2 251089896 251090059 -2166524 + THE1B LTR MaLR 1 156 -208 2075 93 19 47 chr2 251090059 251090380 -2166203 - AluSp SINE Alu -1 312 1 2049 102 33 51 chr2 251090380 251090551 -2166032 + THE1B LTR MaLR 156 329 -35 980 223 27 13 chr2 251090561 251090785 -2165798 + L1ME1 LINE L1 6012 6238 -322 1950 98 91 0 chr2 251091125 251091411 -2165172 - AluSx SINE Alu 0 312 1 297 337 0 31 chr2 251091954 251092052 -2164531 + L2 LINE L2 3215 3309 -4 25 0 0 0 chr2 251092531 251092556 -2164027 + AT_rich Low_complexity Low_complexity 1 25 0 246 62 0 0 chr2 251093066 251093098 -2163485 + (CA)n Simple_repeat Simple_repeat 2 33 0 813 286 65 31 chr2 251093478 251094197 -2162386 + L1MEc LINE L1 1038 1781 -4615 2055 121 0 3 chr2 251094274 251094556 -2162027 + AluSg SINE Alu 1 281 -29 191 217 0 22 chr2 251094699 251094745 -2161838 + L2 LINE L2 3223 3267 -5 270 345 75 23 chr2 251096469 251096643 -2159940 - MIR SINE MIR -20 242 60 2411 84 7 0 chr2 251096842 251097141 -2159442 + AluY SINE Alu 1 301 -10 189 0 0 0 chr2 251097183 251097204 -2159379 + (T)n Simple_repeat Simple_repeat 1 21 0 2098 145 10 48 chr2 251098805 251099198 -2157385 + MSTC LTR MaLR 51 428 0 1225 201 37 69 chr2 251099198 251099569 -2157014 + MLT1C LTR MaLR 69 427 -40 428 220 187 27 chr2 251099753 251099903 -2156680 - MER5A DNA MER1_type -1 188 15 457 155 12 0 chr2 251099969 251100053 -2156530 + MER5A DNA MER1_type 9 93 -96 188 227 133 55 chr2 251099994 251100122 -2156461 - MER5A DNA MER1_type -23 166 29 * 195 155 17 35 chr2 251100427 251100485 -2156098 + (CA)n Simple_repeat Simple_repeat 1 57 0 213 184 26 13 chr2 251100577 251100653 -2155930 + (CA)n Simple_repeat Simple_repeat 2 78 0 189 293 13 27 chr2 251102012 251102087 -2154496 + MER5A DNA MER1_type 17 90 -99 203 324 157 0 chr2 251102170 251102278 -2154305 + MIR SINE MIR 119 243 -19 1450 208 89 3 chr2 251103287 251103623 -2152960 - MLT1A1 LTR MaLR 0 365 1 198 0 0 0 chr2 251104012 251104034 -2152549 + (A)n Simple_repeat Simple_repeat 1 22 0 871 273 7 3 chr2 251104076 251104376 -2152207 - AluYa5 SINE Alu 0 301 1 590 246 113 0 chr2 251105922 251106117 -2150466 + Zaphod DNA AcHobo 245 461 -3570 232 198 102 21 chr2 251106115 251106302 -2150281 + Zaphod DNA AcHobo 734 935 -3096 * 445 327 24 6 chr2 251107575 251107743 -2148840 - HERV16 LTR ERVL -2019 2977 2807 1685 154 52 39 chr2 251107764 251108094 -2148489 - MER1B DNA MER1_type -1 336 3 264 185 46 15 chr2 251108288 251108353 -2148230 - LTR16A1 LTR ERVL -330 127 61 537 237 153 109 chr2 251108461 251108828 -2147755 + MLT1A1 LTR MaLR 1 383 -13 1744 167 33 16 chr2 251110615 251110921 -2145662 + AluJb SINE Alu 1 311 -1 1404 80 0 35 chr2 251110928 251110943 -2145640 + AluSg/x SINE Alu 121 135 -177 2037 110 3 33 chr2 251110943 251111262 -2145321 + AluSx SINE Alu 1 312 0 1404 80 0 35 chr2 251111262 251111445 -2145138 + AluSg/x SINE Alu 135 312 0 289 241 36 62 chr2 251111820 251111932 -2144651 + MER5A DNA MER1_type 81 189 0 392 109 0 0 chr2 251112362 251112417 -2144166 - MSTC LTR MaLR -373 55 1 336 241 50 116 chr2 251113428 251113477 -2143106 + MARNA DNA Mariner 273 324 -262 1891 175 10 37 chr2 251113477 251113878 -2142705 + MLT1B LTR MaLR 1 390 0 336 241 50 116 chr2 251113878 251113934 -2142649 + MARNA DNA Mariner 324 382 -204 2080 114 14 3 chr2 251113934 251114223 -2142360 - AluSg SINE Alu -14 296 5 336 241 50 116 chr2 251114223 251114357 -2142226 + MARNA DNA Mariner 382 497 -89 259 316 44 29 chr2 251119073 251119209 -2137374 + MIR SINE MIR 94 231 -31 547 296 49 15 chr2 251119409 251119612 -2136971 + MER63A DNA MER1_type 1 210 0 343 255 189 33 chr2 251119851 251120063 -2136520 - L3 LINE CR1 0 1577 1333 222 343 14 0 chr2 251121222 251121292 -2135291 + MIR SINE MIR 17 87 -175 667 270 120 43 chr2 251122504 251122963 -2133620 - MLT1D LTR MaLR -7 619 1 573 376 65 12 chr2 251123206 251123577 -2133006 - L1 LINE L1 -1457 4689 4290 2377 143 46 12 chr2 251123577 251123991 -2132592 - MSTA LTR MaLR 0 428 1 573 376 65 12 chr2 251123991 251124049 -2132534 - L1 LINE L1 -1856 4290 4237 961 210 23 5 chr2 251124972 251125186 -2131397 - L1MC2 LINE L1 -189 6155 5938 712 168 23 0 chr2 251128250 251128381 -2128202 + FRAM SINE Alu 18 151 -25 261 299 86 0 chr2 251129344 251129461 -2127122 + MIR SINE MIR 46 172 -90 285 323 10 0 chr2 251130993 251131089 -2125494 + MIR SINE MIR 36 132 -76 527 284 77 60 chr2 251133154 251133584 -2122999 + L1MEd LINE L1 564 1000 -5119 557 342 43 36 chr2 251133772 251134053 -2122530 + L1MEd LINE L1 547 829 -5290 1362 111 6 0 chr2 251134154 251134334 -2122249 + AluSc SINE Alu 115 295 -14 716 308 76 47 chr2 251134587 251135775 -2120808 + L1MEd LINE L1 447 1696 -4614 2149 256 110 50 chr2 251135867 251136086 -2120497 + L1MEd LINE L1 2426 2630 -3499 216 0 0 0 chr2 251136086 251136110 -2120473 + (TC)n Simple_repeat Simple_repeat 2 25 0 2149 256 110 50 chr2 251136110 251136503 -2120080 + L1MEd LINE L1 2630 2998 -3131 1992 109 8 8 chr2 251136503 251136770 -2119813 + AluSx SINE Alu 30 296 -16 2149 256 110 50 chr2 251136770 251136786 -2119797 + L1MEd LINE L1 2998 3012 -3117 11020 34 11 82 chr2 251136786 251138269 -2118314 + SVA Other Other 6 1383 -3 2149 256 110 50 chr2 251138269 251138737 -2117846 + L1MEd LINE L1 3012 3451 -2678 198 0 0 0 chr2 251138737 251138759 -2117824 + (CAAAA)n Simple_repeat Simple_repeat 4 25 0 2149 256 110 50 chr2 251138759 251139571 -2117012 + L1MEd LINE L1 3451 4516 -1613 210 240 0 0 chr2 251140388 251140438 -2116145 + MIR SINE MIR 168 217 -45 652 289 39 102 chr2 251140818 251141084 -2115499 + MLT1L LTR MaLR 34 315 -300 2130 109 11 11 chr2 251141084 251141367 -2115216 + AluSx SINE Alu 1 283 -29 652 289 39 102 chr2 251141367 251141719 -2114864 + MLT1L LTR MaLR 315 613 -2 261 148 0 37 chr2 251142070 251142124 -2114459 + MADE1 DNA Mariner 29 80 0 366 258 144 12 chr2 251142858 251143025 -2113558 + L2 LINE L2 3121 3309 -4 2390 167 31 35 chr2 251144464 251144954 -2111629 + L1MB3 LINE L1 5692 6179 -4 426 329 37 40 chr2 251145510 251145890 -2110693 - L1M4 LINE L1 -1447 4699 4321 1986 173 61 3 chr2 251145912 251146254 -2110329 - MLT1A1 LTR MaLR -1 364 3 1218 91 10 46 chr2 251146290 251146487 -2110096 - AluSc SINE Alu 0 309 120 770 110 0 0 chr2 251146588 251146688 -2109895 - AluY SINE Alu -217 101 2 564 266 74 58 chr2 251146822 251147284 -2109299 - L1M4 LINE L1 -1894 4252 3784 261 232 52 158 chr2 251147283 251147611 -2108972 - L1ME3A LINE L1 0 6170 5878 * 819 234 112 0 chr2 251147967 251148155 -2108428 - MER63A DNA MER1_type -1 209 1 1684 217 9 101 chr2 251148352 251148840 -2107743 - L1ME3A LINE L1 -743 5403 5329 1914 119 0 31 chr2 251148840 251149157 -2107426 + AluSx SINE Alu 1 308 0 1684 217 9 101 chr2 251149157 251149288 -2107295 - L1ME3A LINE L1 -817 5329 5188 23 0 0 0 chr2 251149646 251149669 -2106914 + AT_rich Low_complexity Low_complexity 1 23 0 465 267 78 51 chr2 251150372 251150589 -2105994 - MLT1J LTR MaLR -63 448 226 22 35 0 0 chr2 251150963 251150992 -2105591 + AT_rich Low_complexity Low_complexity 1 29 0 314 200 227 9 chr2 251151004 251151114 -2105469 + Charlie8 DNA MER1_type 88 221 -2196 28 29 0 0 chr2 251152030 251152065 -2104518 + AT_rich Low_complexity Low_complexity 1 35 0 241 86 0 0 chr2 251152914 251152949 -2103634 - MLT2D LTR ERVL 0 414 380 1718 198 27 2 chr2 251152997 251153410 -2103173 - MLT2B1 LTR ERVL -40 480 8 200 238 0 0 chr2 251153743 251153785 -2102798 + T-rich Low_complexity Low_complexity 1 42 0 202 121 30 0 chr2 251154418 251154451 -2102132 + GA-rich Low_complexity Low_complexity 2 35 0 260 341 22 22 chr2 251154570 251154705 -2101878 - L2 LINE L2 -186 3086 2952 476 325 23 33 chr2 251155553 251155858 -2100725 + L2 LINE L2 2034 2335 -979 464 352 41 69 chr2 251155913 251156409 -2100174 + L2 LINE L2 2795 3268 -4 241 176 39 0 chr2 251156464 251156515 -2100068 - L2 LINE L2 0 3313 3261 2005 217 50 84 chr2 251159432 251159685 -2096898 + L1MB5 LINE L1 5557 5817 -357 256 81 0 0 chr2 251159685 251159722 -2096861 + AluYa5 SINE Alu 98 134 -167 2233 84 0 16 chr2 251159722 251160033 -2096550 + AluY SINE Alu 1 306 -5 2005 217 50 84 chr2 251160033 251160262 -2096321 + L1MB5 LINE L1 5816 6052 -122 1820 153 0 20 chr2 251160262 251160557 -2096026 + AluJo SINE Alu 1 289 -23 2005 217 50 84 chr2 251160557 251160676 -2095907 + L1MB5 LINE L1 6052 6174 0 2239 73 0 3 chr2 251160685 251160993 -2095590 + AluY SINE Alu 1 311 0 239 189 14 54 chr2 251161704 251161778 -2094805 + MER5A DNA MER1_type 45 115 -74 23 0 0 0 chr2 251162449 251162472 -2094111 + AT_rich Low_complexity Low_complexity 1 23 0 1702 83 0 13 chr2 251162472 251162702 -2093881 - AluSx SINE Alu -36 276 50 2671 224 29 0 chr2 251162719 251163309 -2093274 - L1MB3 LINE L1 -11 6172 5566 693 150 18 0 chr2 251165547 251165660 -2090923 + L1PA13 LINE L1 6036 6150 -13 2228 130 42 33 chr2 251166957 251167318 -2089265 - THE1B LTR MaLR 0 364 1 249 355 24 16 chr2 251169976 251170100 -2086483 - MIR SINE MIR -10 252 128 198 424 73 6 chr2 251170658 251170835 -2085748 - L2 LINE L2 -4 3268 3080 1088 118 0 6 chr2 251171872 251172050 -2084533 + (TCCA)n Simple_repeat Simple_repeat 1 177 0 730 233 37 0 chr2 251172734 251172897 -2083686 - MLT1E LTR MaLR 0 593 425 1957 128 0 3 chr2 251173000 251173282 -2083301 - AluSq SINE Alu -32 281 1 235 152 22 0 chr2 251173422 251173468 -2083115 + L2 LINE L2 3267 3313 0 2297 119 63 63 chr2 251173497 251173924 -2082659 + MSTA LTR MaLR 2 428 0 283 405 41 0 chr2 251174770 251174965 -2081618 - MIR SINE MIR -41 221 19 250 260 197 31 chr2 251176212 251176339 -2080244 + L2 LINE L2 3165 3312 -1 730 274 98 0 chr2 251176864 251177160 -2079423 - LTR16A LTR ERVL -18 432 108 1280 249 26 3 chr2 251177605 251177914 -2078669 - MLT2C1 LTR ERVL -79 318 3 264 30 0 0 chr2 251177982 251178015 -2078568 + (GA)n Simple_repeat Simple_repeat 1 33 0 200 167 0 0 chr2 251181436 251181466 -2075117 + (CCCG)n Simple_repeat Simple_repeat 2 31 0 1908 138 9 31 chr2 251184809 251185127 -2071456 - AluJo SINE Alu 0 312 2 787 284 47 52 chr2 251185131 251185402 -2071181 - L1ME3 LINE L1 -1 6161 5891 2021 104 24 0 chr2 251185402 251185700 -2070883 - AluSx SINE Alu -7 305 1 787 284 47 52 chr2 251185700 251185830 -2070753 - L1ME3 LINE L1 -271 5891 5762 237 361 0 22 chr2 251185903 251186086 -2070497 + C-rich Low_complexity Low_complexity 1 179 0 212 0 0 35 chr2 251186211 251186240 -2070343 + (GAAA)n Simple_repeat Simple_repeat 4 31 0 1916 191 17 0 chr2 251186440 251186790 -2069793 - MLT1A1 LTR MaLR 0 365 10 2370 239 87 58 chr2 251187075 251187192 -2069391 + L1MEc LINE L1 39 151 -6245 2341 70 0 0 chr2 251187192 251187490 -2069093 - AluY SINE Alu -12 299 2 2370 239 87 58 chr2 251187490 251188177 -2068406 + L1MEc LINE L1 151 866 -5530 268 274 51 20 chr2 251189666 251189781 -2066802 + MIR SINE MIR 34 151 -62 1048 204 123 43 chr2 251190612 251190975 -2065608 + MLT1C LTR MaLR 74 505 0 568 305 38 22 chr2 251191323 251191550 -2065033 + MIR SINE MIR 33 262 0 867 182 6 55 chr2 251195077 251195258 -2061325 - L1MB5 LINE L1 -9 6165 5994 218 176 0 0 chr2 251195493 251195527 -2061056 + MIR SINE MIR 78 111 -151 205 196 71 0 chr2 251195831 251195887 -2060696 + G-rich Low_complexity Low_complexity 1 60 0 894 266 25 0 chr2 251198969 251199172 -2057411 + MER63A DNA MER1_type 1 208 -2 183 42 0 0 chr2 251199290 251199314 -2057269 + (TG)n Simple_repeat Simple_repeat 1 24 0 306 87 0 0 chr2 251199314 251199360 -2057223 + (GA)n Simple_repeat Simple_repeat 2 47 0 287 336 33 38 chr2 251201323 251201534 -2055049 + L2 LINE L2 2853 3062 -210 502 291 119 23 chr2 251201804 251202033 -2054550 + MIR SINE MIR 15 262 0 671 258 90 20 chr2 251202126 251202483 -2054100 + MLT1F1 LTR MaLR 1 382 -185 216 221 0 130 chr2 251202961 251203038 -2053545 + L2 LINE L2 3247 3313 0 255 309 44 39 chr2 251203444 251203648 -2052935 + L2 LINE L2 2830 3034 -238 361 293 66 0 chr2 251203704 251203810 -2052773 - L2 LINE L2 0 3313 3201 2142 116 0 0 chr2 251204966 251205279 -2051304 - AluSx SINE Alu 0 313 1 720 319 44 16 chr2 251205438 251205686 -2050897 - MIR SINE MIR -1 261 7 197 300 43 0 chr2 251205957 251206027 -2050556 - MIR SINE MIR -102 106 34 783 259 234 18 chr2 251206632 251207030 -2049553 + MLT1D LTR MaLR 22 505 0 1168 254 76 15 chr2 251207108 251207518 -2049065 - L1MD2 LINE L1 -16 6343 5909 879 134 0 0 chr2 251207528 251207655 -2048928 - AluSq/x SINE Alu -186 127 1 332 164 0 0 chr2 251207655 251207716 -2048867 - L1MD2 LINE L1 -757 5485 5425 268 177 16 0 chr2 251208065 251208127 -2048456 - MIR SINE MIR -99 163 101 375 317 76 41 chr2 251208450 251209031 -2047552 - L1MEc LINE L1 -3176 3039 2439 803 345 113 51 chr2 251209136 251209819 -2046764 - L1MEc LINE L1 -4023 2373 1649 473 302 95 37 chr2 251211382 251211624 -2044959 - L1ME3A LINE L1 -83 6087 5832 207 339 127 23 chr2 251213246 251213506 -2043077 + L2 LINE L2 1334 1620 -1694 560 292 107 0 chr2 251214351 251214594 -2041989 + LTR16A1 LTR ERVL 189 457 0 440 212 10 0 chr2 251214890 251214989 -2041594 - MER58A DNA MER1_type 0 136 37 1258 202 52 61 chr2 251215069 251215415 -2041168 - MER2 DNA MER2_type -1 343 1 1622 195 17 39 chr2 251216470 251216881 -2039702 - MLT1D LTR MaLR -99 406 5 258 32 0 0 chr2 251218009 251218040 -2038543 + (CA)n Simple_repeat Simple_repeat 1 31 0 2034 172 22 11 chr2 251218099 251218460 -2038123 - MLT1A1 LTR MaLR 0 365 1 1495 197 48 0 chr2 251218827 251219162 -2037421 + MLT1A1 LTR MaLR 2 352 -13 1675 164 3 17 chr2 251219451 251219743 -2036840 + AluSx SINE Alu 23 310 -2 275 219 137 0 chr2 251219745 251219818 -2036765 - MSTB LTR MaLR -65 361 279 2160 182 26 26 chr2 251220286 251220642 -2035941 + MSTA LTR MaLR 1 359 -69 1785 175 3 16 chr2 251220642 251220956 -2035627 - AluSx SINE Alu -2 310 1 2160 182 26 26 chr2 251220956 251221027 -2035556 + MSTA LTR MaLR 358 428 0 460 386 77 20 chr2 251221986 251222377 -2034206 + L1MC/D LINE L1 4671 5083 -1063 438 311 27 5 chr2 251222451 251222670 -2033913 - LTR16A LTR ERVL -4 446 223 1038 166 51 23 chr2 251222678 251222895 -2033688 - AluJo SINE Alu -2 310 88 321 352 90 58 chr2 251223118 251223366 -2033217 + L1MC/D LINE L1 5211 5472 -743 366 295 68 26 chr2 251223560 251223750 -2032833 - L1ME LINE L1 -593 5573 5376 885 154 6 6 chr2 251223750 251223906 -2032677 - L1PA14 LINE L1 -2 6159 6004 303 347 75 0 chr2 251224242 251224389 -2032194 + MIR SINE MIR 62 219 -43 449 350 0 27 chr2 251225725 251225908 -2030675 + (CA)n Simple_repeat Simple_repeat 1 178 0 225 273 0 30 chr2 251225916 251226048 -2030535 + (CATATA)n Simple_repeat Simple_repeat 1 128 0 274 323 0 24 chr2 251226104 251226136 -2030447 + (CACG)n Simple_repeat Simple_repeat 1 32 -92 1859 159 126 26 chr2 251226136 251226525 -2030058 + MSTA LTR MaLR 1 428 0 274 323 0 24 chr2 251226525 251226619 -2029964 + (CACG)n Simple_repeat Simple_repeat 32 124 0 25 83 0 0 chr2 251228177 251228237 -2028346 + AT_rich Low_complexity Low_complexity 1 60 0 463 267 113 0 chr2 251228329 251228524 -2028059 - Zaphod DNA AcHobo -3570 461 245 265 377 19 19 chr2 251230520 251230659 -2025924 + L2 LINE L2 2914 3055 -217 1764 152 17 7 chr2 251230659 251230955 -2025628 - AluSx SINE Alu -2 310 12 265 377 19 19 chr2 251230955 251230969 -2025614 + L2 LINE L2 3054 3067 -205 27 0 0 0 chr2 251231199 251231226 -2025357 + AT_rich Low_complexity Low_complexity 1 27 0 456 284 84 32 chr2 251234316 251234506 -2022077 - L1ME LINE L1 -907 5239 5040 686 280 137 16 chr2 251236438 251236810 -2019773 - MLT1G1 LTR MaLR -11 584 168 339 343 35 18 chr2 251236963 251237132 -2019451 + L1ME2 LINE L1 5844 6015 -149 271 206 93 62 chr2 251237347 251237444 -2019139 + L1MA10 LINE L1 6227 6326 -8 419 111 44 50 chr2 251237654 251237834 -2018749 + (CA)n Simple_repeat Simple_repeat 1 179 0 287 167 54 6 chr2 251237870 251238038 -2018545 + (CA)n Simple_repeat Simple_repeat 1 176 0 251 262 103 0 chr2 251239356 251239482 -2017101 + L2 LINE L2 2922 3060 -212 573 291 52 15 chr2 251240191 251240459 -2016124 + LTR16A1 LTR ERVL 178 455 -2 1021 251 159 20 chr2 251241820 251242166 -2014417 - MLT2B2 LTR ERVL -1 514 121 2395 138 22 0 chr2 251243019 251243375 -2013208 - THE1B LTR MaLR 0 364 1 302 325 57 19 chr2 251243826 251243965 -2012618 + L1MEd LINE L1 55 202 -5917 2198 95 7 0 chr2 251243965 251244271 -2012312 + AluSq SINE Alu 1 308 -5 302 325 57 19 chr2 251244271 251244288 -2012295 + L1MEd LINE L1 202 217 -5902 310 316 25 68 chr2 251244408 251244645 -2011938 + L1MEd LINE L1 612 838 -5281 200 250 80 0 chr2 251244827 251244915 -2011668 - MER91A DNA MER1_type -44 152 58 1923 193 29 3 chr2 251244974 251245353 -2011230 - MLT1B LTR MaLR -1 389 1 1913 138 13 7 chr2 251245465 251245770 -2010813 - AluSx SINE Alu -5 307 1 949 240 30 113 chr2 251245770 251246266 -2010317 + LTR37B LTR ERV1 7 461 -7 23 0 0 0 chr2 251246592 251246615 -2009968 + AT_rich Low_complexity Low_complexity 1 23 0 533 271 62 24 chr2 251247564 251247774 -2008809 - MLT1G1 LTR MaLR -287 218 1 246 303 106 8 chr2 251247968 251248100 -2008483 - L2 LINE L2 -520 2794 2650 220 327 78 51 chr2 251249533 251249906 -2006677 - L2 LINE L2 -706 2608 2226 472 250 278 39 chr2 251252375 251252731 -2003852 + MLT1H LTR MaLR 109 549 0 241 273 182 9 chr2 251253851 251253961 -2002622 + MIR SINE MIR 21 149 -113 2724 195 32 44 chr2 251254833 251254888 -2001695 - L1MB3 LINE L1 -10 6173 6119 2481 65 0 0 chr2 251254888 251255197 -2001386 - AluY SINE Alu -2 309 1 2724 195 32 44 chr2 251255197 251255757 -2000826 - L1MB3 LINE L1 -64 6119 5565 237 311 80 13 chr2 251258463 251258614 -1997969 - L2 LINE L2 -209 3104 2944 2119 131 3 0 chr2 251259263 251259569 -1997014 + AluSx SINE Alu 1 307 -5 212 347 99 0 chr2 251263155 251263276 -1993307 - MIR SINE MIR -128 134 2 522 225 0 0 chr2 251263657 251263799 -1992784 + (CA)n Simple_repeat Simple_repeat 1 142 0 292 206 10 10 chr2 251263812 251263909 -1992674 + (CA)n Simple_repeat Simple_repeat 2 98 0 398 227 6 23 chr2 251263932 251264104 -1992479 + (CATATA)n Simple_repeat Simple_repeat 3 171 0 224 279 0 0 chr2 251264105 251264166 -1992417 + (CA)n Simple_repeat Simple_repeat 2 62 0 192 333 0 16 chr2 251264532 251264595 -1991988 - L2 LINE L2 0 3272 3211 549 271 248 10 chr2 251264774 251265257 -1991326 - L2 LINE L2 -337 2977 2380 296 267 22 0 chr2 251266726 251266816 -1989767 - L2 LINE L2 -1048 2266 2175 190 336 39 19 chr2 251267637 251267741 -1988842 - L2 LINE L2 -643 2671 2566 1623 191 111 52 chr2 251268603 251268819 -1987764 + MLT1D LTR MaLR 1 203 -302 2288 206 54 2 chr2 251268819 251269281 -1987302 - MER66B LTR ERV1 0 486 1 1623 191 111 52 chr2 251269281 251269541 -1987042 + MLT1D LTR MaLR 203 505 0 435 309 22 0 chr2 251269891 251270030 -1986553 + LTR53 LTR ERVL 367 508 -11 2259 163 64 10 chr2 251270126 251270530 -1986053 + MSTB LTR MaLR 1 426 0 1251 211 131 72 chr2 251270537 251271025 -1985558 - MLT2B1 LTR ERVL -2 518 2 182 326 29 64 chr2 251272071 251272243 -1984340 + L2 LINE L2 2917 3082 -190 255 122 0 0 chr2 251272343 251272392 -1984191 + (TTCA)n Simple_repeat Simple_repeat 4 52 0 259 204 265 0 chr2 251275732 251275830 -1980753 - MER5C DNA MER1_type -74 250 127 555 305 83 26 chr2 251276004 251276309 -1980274 + MLT1E LTR MaLR 1 383 -212 1071 225 63 22 chr2 251276509 251276780 -1979803 + MLT1E LTR MaLR 312 593 0 4245 165 52 1 chr2 251278856 251279662 -1976921 + L1MB3 LINE L1 5334 6180 -3 370 273 23 23 chr2 251280520 251280648 -1975935 + CT-rich Low_complexity Low_complexity 1 128 0 28 0 0 0 chr2 251280962 251280990 -1975593 + AT_rich Low_complexity Low_complexity 1 28 0 491 177 0 0 chr2 251281459 251281538 -1975045 - MADE1 DNA Mariner 0 80 2 183 376 88 0 chr2 251282805 251282930 -1973653 - MIR SINE MIR -71 191 56 965 271 68 43 chr2 251284665 251285108 -1971475 + LTR16B LTR ERVL 1 454 -10 1496 264 110 127 chr2 251285211 251285709 -1970874 - L1ME3 LINE L1 0 6100 5595 234 0 0 0 chr2 251285709 251285735 -1970848 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 2053 121 0 0 chr2 251285734 251286040 -1970543 - AluSx SINE Alu 0 306 1 1496 264 110 127 chr2 251286040 251286595 -1969988 - L1ME3 LINE L1 -810 5290 5040 344 248 70 39 chr2 251286601 251286730 -1969853 + L2 LINE L2 3169 3301 -12 423 273 82 67 chr2 251286735 251286750 -1969833 - L1ME3 LINE L1 -1015 5065 5052 963 123 78 0 chr2 251286750 251286904 -1969679 - L1MA5 LINE L1 -2 6298 6133 423 273 82 67 chr2 251286904 251287058 -1969525 - L1ME3 LINE L1 -1028 5052 4902 1317 203 77 0 chr2 251287058 251287339 -1969244 + AluJb SINE Alu 1 301 0 423 273 82 67 chr2 251287339 251287584 -1968999 - L1ME3 LINE L1 -1178 4902 4643 609 281 183 24 chr2 251287631 251288040 -1968543 + MLT1H1 LTR MaLR 78 551 -4 1001 261 109 42 chr2 251288041 251288668 -1967915 - L1ME3 LINE L1 -1430 4650 4067 2075 140 0 0 chr2 251288668 251288968 -1967615 + AluSx SINE Alu 5 304 -8 1001 261 109 42 chr2 251288968 251289384 -1967199 - L1ME3 LINE L1 -2013 4067 3680 2017 121 24 0 chr2 251289384 251289674 -1966909 - AluSx SINE Alu -15 297 1 1001 261 109 42 chr2 251289674 251290010 -1966573 - L1ME3 LINE L1 -2400 3680 1723 570 300 93 44 chr2 251290035 251290981 -1965602 - L1ME3 LINE L1 -4471 1624 657 300 299 65 58 chr2 251291006 251291160 -1965423 - L1MC4 LINE L1 -1316 6726 6572 452 306 84 81 chr2 251291241 251291763 -1964820 - L1ME3 LINE L1 -5542 528 5 221 286 160 17 chr2 251292124 251292243 -1964340 + MIR3 SINE MIR 68 203 -5 198 338 59 0 chr2 251292640 251292708 -1963875 + L2 LINE L2 2703 2774 -540 273 369 86 4 chr2 251292760 251293028 -1963555 + L2 LINE L2 2881 3170 -143 656 316 4 15 chr2 251293296 251293568 -1963015 - L1ME2 LINE L1 -205 5959 5691 407 228 22 59 chr2 251293638 251293774 -1962809 + L2 LINE L2 3142 3272 0 414 195 24 0 chr2 251294461 251294543 -1962040 + MLT1B LTR MaLR 3 86 -381 628 210 25 25 chr2 251294569 251294726 -1961857 - L1PB4 LINE L1 0 6156 6000 4890 161 49 13 chr2 251294801 251295270 -1961313 - L1PA16 LINE L1 -9 6157 5706 2330 109 0 0 chr2 251295270 251295581 -1961002 - AluSx SINE Alu -1 311 1 4890 161 49 13 chr2 251295581 251296305 -1960278 - L1PA16 LINE L1 -460 5706 4924 2803 195 26 67 chr2 251296313 251296528 -1960055 - L1 LINE L1 -2358 3788 3566 1602 192 22 0 chr2 251296528 251296804 -1959779 + AluJb SINE Alu 1 282 -30 189 0 0 0 chr2 251296807 251296828 -1959755 + (CAAA)n Simple_repeat Simple_repeat 3 23 0 2803 195 26 67 chr2 251296828 251297479 -1959104 - L1 LINE L1 -2582 3564 2953 1486 193 26 7 chr2 251297490 251297796 -1958787 + MLT1B LTR MaLR 78 389 -1 247 185 19 0 chr2 251298261 251298315 -1958268 + MIR SINE MIR 90 144 -64 214 171 0 0 chr2 251298490 251298525 -1958058 + (TG)n Simple_repeat Simple_repeat 2 36 0 918 266 37 0 chr2 251298709 251298923 -1957660 - MER58A DNA MER1_type -2 222 1 303 265 49 20 chr2 251299168 251299270 -1957313 - MIR SINE MIR -49 213 109 241 273 171 63 chr2 251300331 251300461 -1956122 + L2 LINE L2 2927 3042 -271 2433 95 7 0 chr2 251300461 251300765 -1955818 - AluSx SINE Alu -4 308 3 241 273 171 63 chr2 251300765 251300920 -1955663 + L2 LINE L2 3042 3243 -70 2327 77 0 3 chr2 251301107 251301436 -1955147 - AluSq SINE Alu 0 328 1 239 330 22 22 chr2 251301831 251301922 -1954661 - L2 LINE L2 0 3272 3182 255 327 97 18 chr2 251302111 251302276 -1954307 + MIR SINE MIR 59 236 -26 258 32 0 0 chr2 251302937 251302968 -1953615 + (T)n Simple_repeat Simple_repeat 1 31 0 252 291 30 48 chr2 251303717 251303882 -1952701 + LTR67 LTR ERVL 393 554 -3 1641 225 29 3 chr2 251306674 251307025 -1949558 - MLT1A1 LTR MaLR -3 362 3 262 253 27 13 chr2 251307374 251307449 -1949134 - LTR16C LTR ERVL -245 246 171 1074 249 26 8 chr2 251308147 251308412 -1948171 + MLT1F1 LTR MaLR 298 567 0 864 163 141 0 chr2 251308887 251309071 -1947512 + MLT1E LTR MaLR 384 593 0 314 331 70 28 chr2 251309298 251309440 -1947143 + MIR SINE MIR 110 257 -5 271 298 89 16 chr2 251310444 251310568 -1946015 + MIR SINE MIR 20 152 -56 4327 171 50 32 chr2 251311038 251311227 -1945356 + MER49 LTR ERV1 5 189 -734 2330 123 0 0 chr2 251311227 251311529 -1945054 + AluSx SINE Alu 1 302 -10 4327 171 50 32 chr2 251311529 251312242 -1944341 + MER49 LTR ERV1 189 923 0 550 265 63 26 chr2 251312453 251312721 -1943862 - LTR16A1 LTR ERVL -2 455 178 251 254 114 0 chr2 251313425 251313539 -1943044 - L2 LINE L2 -207 3065 2939 511 141 40 26 chr2 251314891 251315318 -1941265 + (TG)n Simple_repeat Simple_repeat 1 433 0 491 62 31 98 chr2 251316276 251316469 -1940114 + (TG)n Simple_repeat Simple_repeat 1 180 0 336 166 40 11 chr2 251316483 251316658 -1939925 + (TG)n Simple_repeat Simple_repeat 1 180 0 433 143 46 19 chr2 251316672 251317153 -1939430 + (TG)n Simple_repeat Simple_repeat 1 494 0 279 206 93 62 chr2 251317327 251317424 -1939159 - L1MA10 LINE L1 -8 6326 6227 2330 103 3 3 chr2 251318308 251318620 -1937963 - AluSx SINE Alu 0 312 1 402 327 60 18 chr2 251318630 251318911 -1937672 - L1ME1 LINE L1 -153 6013 5721 855 246 142 27 chr2 251318927 251319378 -1937205 - L1MEc LINE L1 -5597 799 297 570 273 19 6 chr2 251319431 251319592 -1936991 - L1MEc LINE L1 -6199 197 35 245 273 120 50 chr2 251319804 251320046 -1936537 - L1ME1 LINE L1 -1487 4659 4401 1802 156 86 9 chr2 251320085 251320424 -1936159 - MLT1A1 LTR MaLR 0 365 1 329 249 50 126 chr2 251320561 251320822 -1935761 - L1ME1 LINE L1 -1990 4156 3916 469 254 168 50 chr2 251320839 251321178 -1935405 + L1MD1 LINE L1 17 395 -6145 308 295 40 60 chr2 251321704 251321853 -1934730 + L1MD1 LINE L1 582 727 -5813 2771 253 45 18 chr2 251322001 251322717 -1933866 + L1MD1 LINE L1 1001 1696 -4844 2126 141 0 0 chr2 251322717 251323015 -1933568 + AluSq SINE Alu 1 298 -15 2771 253 45 18 chr2 251323015 251323935 -1932648 + L1MD1 LINE L1 1696 3685 -2855 259 308 23 0 chr2 251323942 251324072 -1932511 + L1MD1 LINE L1 3767 3899 -2641 4208 209 46 35 chr2 251324075 251325283 -1931300 + L1MD1 LINE L1 5243 6436 -200 2353 53 7 20 chr2 251325283 251325584 -1930999 + AluY SINE Alu 1 297 -14 4208 209 46 35 chr2 251325584 251325618 -1930965 + L1MD1 LINE L1 6436 6468 -168 1893 141 10 32 chr2 251325618 251325930 -1930653 - AluJb SINE Alu -6 306 2 4208 209 46 35 chr2 251325930 251326116 -1930467 + L1MD1 LINE L1 6468 6636 0 21 0 0 0 chr2 251326730 251326751 -1929832 + AT_rich Low_complexity Low_complexity 1 21 0 306 256 172 89 chr2 251326809 251327012 -1929571 - HAL1 LINE L1 -168 2339 2120 16709 143 19 12 chr2 251327024 251328903 -1927680 - Tigger4(Zombi) DNA MER2_type 0 2731 826 2306 97 20 0 chr2 251328903 251329203 -1927380 + AluSq SINE Alu 1 306 -7 16709 143 19 12 chr2 251329203 251330034 -1926549 - Tigger4(Zombi) DNA MER2_type -1905 826 2 355 309 67 27 chr2 251330090 251330239 -1926344 - HAL1b LINE L1 -503 845 691 400 276 39 0 chr2 251330251 251330378 -1926205 - HAL1b LINE L1 -702 646 515 813 293 71 112 chr2 251330449 251331043 -1925540 - L1M2 LINE L1 -964 1462 1 481 141 15 37 chr2 251331609 251331744 -1924839 + C-rich Low_complexity Low_complexity 5 136 0 475 164 11 50 chr2 251331798 251332080 -1924503 + C-rich Low_complexity Low_complexity 1 270 0 524 141 6 59 chr2 251332100 251332270 -1924313 + C-rich Low_complexity Low_complexity 2 162 0 426 252 40 0 chr2 251332291 251332442 -1924141 + CT-rich Low_complexity Low_complexity 3 159 0 207 100 0 0 chr2 251332581 251332611 -1923972 + (TCCC)n Simple_repeat Simple_repeat 2 31 0 2371 76 23 0 chr2 251332611 251332912 -1923671 - AluSq SINE Alu -5 308 1 308 300 33 0 chr2 251335825 251335915 -1920668 - MIR SINE MIR -109 153 61 325 243 14 0 chr2 251336800 251336870 -1919713 - LTR16C LTR ERVL 0 491 421 635 289 42 5 chr2 251337795 251337985 -1918598 + MIR SINE MIR 66 262 0 383 177 44 35 chr2 251338073 251338186 -1918397 - LTR33A LTR ERVL -5 518 405 2030 157 6 6 chr2 251338398 251338710 -1917873 + AluSx SINE Alu 1 312 0 964 281 152 11 chr2 251338976 251339442 -1917141 + L1MD1 LINE L1 5532 6063 -179 2402 138 95 5 chr2 251339521 251339912 -1916671 - MSTA LTR MaLR -2 426 1 1141 229 16 26 chr2 251341517 251341822 -1914761 - MLT1D LTR MaLR -2 503 202 226 291 0 0 chr2 251341947 251342002 -1914581 + (TCCA)n Simple_repeat Simple_repeat 2 56 0 300 275 18 0 chr2 251342013 251342184 -1914399 + (TCCA)n Simple_repeat Simple_repeat 1 174 0 395 256 23 0 chr2 251342212 251342388 -1914195 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 472 253 12 0 chr2 251342420 251342586 -1913997 + (TCCA)n Simple_repeat Simple_repeat 1 168 0 780 167 6 11 chr2 251342606 251342786 -1913797 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 607 212 0 27 chr2 251342830 251343014 -1913569 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 502 139 10 10 chr2 251343034 251343135 -1913448 + (TCCA)n Simple_repeat Simple_repeat 3 103 0 214 364 73 0 chr2 251343140 251343291 -1913292 - L2 LINE L2 0 3313 3152 229 380 41 0 chr2 251343679 251343800 -1912783 + MIR SINE MIR 104 229 -33 350 344 68 12 chr2 251348952 251349115 -1907468 + MIR SINE MIR 60 231 -31 243 271 42 42 chr2 251350703 251350799 -1905784 - L2 LINE L2 -20 3252 3157 1056 290 57 61 chr2 251351348 251352018 -1904565 - L1MC5 LINE L1 -389 7572 6906 300 282 82 18 chr2 251353176 251353286 -1903297 + L1MC4 LINE L1 6588 6704 -1338 441 116 21 53 chr2 251353800 251353895 -1902688 + MER4A LTR ERV1 1 92 -572 * 1744 115 143 25 chr2 251353892 251354257 -1902326 + MER4A LTR ERV1 257 664 0 271 275 119 9 chr2 251354304 251354413 -1902170 + L1ME1 LINE L1 5636 5756 -410 587 304 50 7 chr2 251354473 251354753 -1901830 + L1ME1 LINE L1 5871 6162 -4 364 247 0 11 chr2 251355630 251355719 -1900864 - MER81 DNA DNA -24 90 3 255 314 154 23 chr2 251356805 251356980 -1899603 + L2 LINE L2 3109 3306 -7 557 296 104 4 chr2 251357373 251357643 -1898940 - L1M4 LINE L1 -2885 3261 2965 1354 292 14 7 chr2 251357648 251358079 -1898504 - L1ME2 LINE L1 -59 6105 5672 311 325 111 39 chr2 251358261 251358495 -1898088 - L2 LINE L2 0 3272 3022 241 225 9 9 chr2 251358740 251358851 -1897732 + (TG)n Simple_repeat Simple_repeat 1 111 0 363 286 0 0 chr2 251358913 251359361 -1897222 + (TG)n Simple_repeat Simple_repeat 1 448 0 744 87 72 18 chr2 251359445 251359780 -1896803 + (CTGGGG)n Simple_repeat Simple_repeat 1 353 0 766 64 71 4 chr2 251359946 251360238 -1896345 + (CTGGGG)n Simple_repeat Simple_repeat 1 311 0 192 107 0 0 chr2 251362684 251362712 -1893871 + MIR SINE MIR 117 144 -118 2661 96 27 8 chr2 251363096 251363461 -1893122 + THE1C LTR MaLR 4 375 0 245 346 19 10 chr2 251363499 251363603 -1892980 - MIR SINE MIR -71 137 33 290 298 6 42 chr2 251365324 251365492 -1891091 + GA-rich Low_complexity Low_complexity 1 162 0 208 144 0 87 chr2 251365502 251365606 -1890977 + (AGGGGG)n Simple_repeat Simple_repeat 6 100 0 209 313 222 7 chr2 251366635 251366779 -1889804 - MIR SINE MIR -1 261 87 203 186 0 68 chr2 251366859 251366918 -1889665 - MIR SINE MIR -145 117 63 204 156 49 75 chr2 251367049 251367148 -1889435 - MIR SINE MIR -89 119 20 209 244 0 12 chr2 251373322 251373404 -1883179 + (CA)n Simple_repeat Simple_repeat 1 81 0 374 290 7 0 chr2 251373415 251373706 -1882877 + (CA)n Simple_repeat Simple_repeat 1 293 0 199 293 86 35 chr2 251373821 251373937 -1882646 + MIR3 SINE MIR 3 124 -84 279 273 101 10 chr2 251375452 251375551 -1881032 + MIR3 SINE MIR 86 193 -15 254 374 0 0 chr2 251377530 251377701 -1878882 + (TGGA)n Simple_repeat Simple_repeat 1 171 0 277 328 0 38 chr2 251377866 251378052 -1878531 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 293 363 0 0 chr2 251378441 251378612 -1877971 + (TGGA)n Simple_repeat Simple_repeat 1 171 0 207 218 109 50 chr2 251379307 251379408 -1877175 + MIR SINE MIR 31 137 -125 264 227 164 18 chr2 251379977 251380087 -1876496 - MIR SINE MIR -63 145 20 635 191 0 16 chr2 251381231 251381414 -1875169 + (CA)n Simple_repeat Simple_repeat 1 180 0 219 170 0 0 chr2 251381427 251381474 -1875109 + (CA)n Simple_repeat Simple_repeat 2 48 0 1959 94 4 0 chr2 251382420 251382676 -1873907 - AluSx SINE Alu -55 257 1 280 292 124 9 chr2 251383362 251383475 -1873108 + MER5C DNA MER1_type 195 320 -4 819 342 89 54 chr2 251383764 251384323 -1872260 + L1ME4a LINE L1 5290 5868 -253 615 148 19 0 chr2 251384641 251384749 -1871834 + L1MC3 LINE L1 6649 6758 -1027 663 273 55 41 chr2 251384749 251385020 -1871563 + MLT1D LTR MaLR 223 497 -8 363 357 150 20 chr2 251385946 251386532 -1870051 - L2 LINE L2 -583 2731 2070 21 0 0 0 chr2 251386827 251386848 -1869735 + AT_rich Low_complexity Low_complexity 1 21 0 988 196 55 65 chr2 251387050 251387391 -1869192 + L1MB8 LINE L1 4214 4552 -1594 1402 253 38 43 chr2 251387391 251387787 -1868796 + MLT2C1 LTR ERVL 4 397 0 988 196 55 65 chr2 251387787 251387844 -1868739 + L1MB8 LINE L1 4552 4608 -1538 2417 221 77 9 chr2 251387857 251388832 -1867751 + L1MB8 LINE L1 5111 6172 -8 225 141 34 47 chr2 251388835 251388984 -1867599 + (TA)n Simple_repeat Simple_repeat 1 147 0 37 52 0 0 chr2 251388997 251389055 -1867528 + AT_rich Low_complexity Low_complexity 1 58 0 354 291 102 40 chr2 251389055 251389346 -1867237 + L1MCa LINE L1 1931 6244 -157 219 212 61 0 chr2 251389346 251389445 -1867138 + (TA)n Simple_repeat Simple_repeat 2 106 0 389 181 24 0 chr2 251389455 251389538 -1867045 + L1MB7 LINE L1 6092 6176 -8 1311 72 0 0 chr2 251389739 251389919 -1866664 + (CAGGG)n Simple_repeat Simple_repeat 1 180 0 1265 124 0 3 chr2 251389930 251390272 -1866311 + (CAGGG)n Simple_repeat Simple_repeat 1 340 0 429 276 0 4 chr2 251390305 251390560 -1866023 + (CAGGG)n Simple_repeat Simple_repeat 1 253 0 312 136 0 0 chr2 251391054 251391098 -1865485 + Alu SINE Alu 1 44 -258 2088 125 4 0 chr2 251391098 251391406 -1865177 + AluSx SINE Alu 1 309 0 1330 218 73 24 chr2 251391829 251392255 -1864328 + MER69 DNA AcHobo 1954 2400 -126 943 275 165 20 chr2 251392638 251393086 -1863497 - MLT1G1 LTR MaLR -7 588 76 1302 286 63 60 chr2 251394073 251394658 -1861925 + MLT1E LTR MaLR 1 587 -6 231 281 49 0 chr2 251394878 251394960 -1861623 - MLT1J LTR MaLR 0 511 426 265 256 44 11 chr2 251395128 251395218 -1861365 - MLT1L LTR MaLR -327 288 196 214 237 11 0 chr2 251396859 251396925 -1859658 - MIR SINE MIR -67 141 98 313 250 48 0 chr2 251397394 251397478 -1859105 + MLT1G1 LTR MaLR 498 585 -10 658 243 40 27 chr2 251399954 251400176 -1856407 - L1MB8 LINE L1 -1 6177 5953 632 295 93 60 chr2 251400231 251400746 -1855837 + MER45C DNA AcHobo 4 535 -418 288 263 53 21 chr2 251400803 251400898 -1855685 + MER45C DNA AcHobo 703 800 -153 303 200 47 24 chr2 251402779 251402864 -1853719 + Charlie8 DNA MER1_type 115 201 -2216 409 246 79 8 chr2 251403768 251403894 -1852689 - L1ME3A LINE L1 -5 6165 6031 391 317 42 12 chr2 251404254 251404421 -1852162 - L1ME3A LINE L1 -234 5936 5765 368 347 73 53 chr2 251404877 251405122 -1851461 - L1MDa LINE L1 -4164 2557 2308 547 273 69 62 chr2 251405349 251405451 -1851132 - L1MDa LINE L1 -4474 2066 1966 2281 108 0 0 chr2 251405451 251405746 -1850837 + AluSx SINE Alu 1 295 -17 231 36 0 0 chr2 251405756 251405784 -1850799 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 547 273 69 62 chr2 251405784 251406016 -1850567 - L1MDa LINE L1 -4582 1958 1746 3167 231 59 18 chr2 251406137 251407947 -1848636 - L1MDa LINE L1 -3010 3530 1648 1335 250 75 36 chr2 251408053 251408243 -1848340 - L1MDa LINE L1 -5046 1494 1313 2144 147 3 3 chr2 251408243 251408555 -1848028 - AluJb SINE Alu 0 312 1 1335 250 75 36 chr2 251408555 251408947 -1847636 - L1MDa LINE L1 -5227 1313 889 344 293 62 43 chr2 251409000 251409208 -1847375 - MLT1L LTR MaLR -2 613 298 2126 167 41 35 chr2 251412639 251412746 -1843837 + MLT1C LTR MaLR 2 107 -360 1575 121 84 153 chr2 251412746 251413034 -1843549 - MER65A LTR ERV1 0 445 201 2527 66 0 0 chr2 251413034 251413336 -1843247 - AluY SINE Alu -9 302 1 1575 121 84 153 chr2 251413336 251413525 -1843058 - MER65A LTR ERV1 -244 201 1 2126 167 41 35 chr2 251413525 251413877 -1842706 + MLT1C LTR MaLR 107 464 -3 345 276 8 8 chr2 251415675 251415798 -1840785 + L1M4 LINE L1 4487 4609 -1537 1313 317 60 29 chr2 251415829 251416441 -1840142 + L1M2c LINE L1 8 638 -6151 3771 217 38 25 chr2 251416873 251417875 -1838708 + L1M2c LINE L1 1320 2334 -4455 472 347 0 0 chr2 251420641 251420811 -1835772 + (CA)n Simple_repeat Simple_repeat 1 170 0 243 289 0 0 chr2 251420839 251420967 -1835616 + (CA)n Simple_repeat Simple_repeat 1 128 0 457 231 100 65 chr2 251422284 251422513 -1834070 + LTR33A LTR ERVL 13 249 -274 531 239 52 0 chr2 251422582 251422716 -1833867 + LTR33A LTR ERVL 383 523 0 4004 232 68 51 chr2 251423934 251424310 -1832273 + Charlie1a DNA MER1_type 48 416 -2345 1834 184 0 0 chr2 251424310 251424609 -1831974 - AluJo SINE Alu -13 299 1 4004 232 68 51 chr2 251424609 251425616 -1830967 + Charlie1a DNA MER1_type 416 1455 0 457 331 6 17 chr2 251431368 251431549 -1825034 - MIR SINE MIR -26 236 58 568 280 163 46 chr2 251432300 251432859 -1823724 - L1MDa LINE L1 -3531 3009 2369 262 333 54 40 chr2 251433175 251433679 -1822904 - HAL1 LINE L1 -823 1684 1174 308 83 21 0 chr2 251433796 251433844 -1822739 + (CA)n Simple_repeat Simple_repeat 1 49 0 216 135 0 0 chr2 251433852 251433889 -1822694 + (TG)n Simple_repeat Simple_repeat 2 38 0 304 310 55 65 chr2 251433894 251434094 -1822489 - HAL1 LINE L1 -1456 1051 854 559 264 111 60 chr2 251434498 251435013 -1821570 - L1MDa LINE L1 -5025 1696 1156 214 247 0 27 chr2 251436044 251436117 -1820466 + MIR SINE MIR 57 127 -135 1872 146 17 17 chr2 251436743 251437037 -1819546 + AluJb SINE Alu 1 294 -18 220 351 113 58 chr2 251437656 251437984 -1818599 - L2 LINE L2 0 3272 2927 359 267 0 9 chr2 251438244 251438360 -1818223 - L1MC4 LINE L1 0 8042 7928 209 83 28 0 chr2 251438367 251438403 -1818180 + (TAGA)n Simple_repeat Simple_repeat 1 37 0 2047 144 18 12 chr2 251438459 251438799 -1817784 + MER2 DNA MER2_type 2 343 -1 264 30 0 0 chr2 251438809 251438842 -1817741 + (CA)n Simple_repeat Simple_repeat 2 34 0 1129 257 180 49 chr2 251438844 251439031 -1817552 - L1MC4 LINE L1 -132 7910 7749 2257 131 0 0 chr2 251439031 251439336 -1817247 - AluSx SINE Alu -7 305 1 1129 257 180 49 chr2 251439336 251439992 -1816591 - L1MC4 LINE L1 -293 7749 6906 281 305 42 36 chr2 251440406 251440573 -1816010 + L1ME LINE L1 5567 5734 -387 1656 163 7 36 chr2 251441540 251441846 -1814737 + AluJo SINE Alu 4 300 -12 319 313 96 53 chr2 251441993 251442201 -1814382 + L1MEd LINE L1 437 653 -5466 3121 227 17 33 chr2 251444699 251445537 -1811046 - L1MB8 LINE L1 0 6178 5355 200 289 64 70 chr2 251446421 251446577 -1810006 - MIR3 SINE MIR -23 185 31 2124 252 113 12 chr2 251447728 251448546 -1808037 - L1MD2 LINE L1 -15 6344 5445 313 291 196 48 chr2 251448816 251449132 -1807451 + L2 LINE L2 2951 3313 0 3232 131 35 15 chr2 251449171 251449690 -1806893 - MER1A DNA MER1_type 0 529 1 1229 233 68 34 chr2 251450316 251450759 -1805824 - Charlie1a DNA MER1_type -17 1438 981 3158 182 55 12 chr2 251450784 251451313 -1805270 - L1MB1 LINE L1 -1 6167 5605 2112 135 23 0 chr2 251451313 251451616 -1804967 - AluSx SINE Alu -2 310 1 3158 182 55 12 chr2 251451616 251451728 -1804855 - L1MB1 LINE L1 -563 5605 5499 1589 202 46 4 chr2 251451728 251452276 -1804307 - L1M3 LINE L1 -575 5593 5018 503 200 146 0 chr2 251452278 251452408 -1804175 + L1 LINE L1 4817 4965 -1181 3458 216 63 16 chr2 251452413 251453342 -1803241 - Charlie1a DNA MER1_type -476 979 7 1440 175 73 32 chr2 251453615 251453669 -1802914 + MER46B DNA MER2_type 5 55 -2676 2489 74 0 0 chr2 251453669 251453967 -1802616 - AluY SINE Alu -13 298 1 1440 175 73 32 chr2 251453967 251454254 -1802329 + MER46B DNA MER2_type 55 235 -1 441 321 57 25 chr2 251454462 251454901 -1801682 - L1ME LINE L1 -459 5780 5328 412 330 77 37 chr2 251454962 251455262 -1801321 - L1ME LINE L1 -953 5262 4951 1119 272 82 34 chr2 251455316 251455736 -1800847 - L1ME LINE L1 -3450 2765 2312 764 138 46 23 chr2 251455736 251455866 -1800717 - FLAM_C SINE Alu 0 133 1 1119 272 82 34 chr2 251455866 251455982 -1800601 - L1ME LINE L1 -3903 2312 2203 492 240 29 6 chr2 251455989 251456160 -1800423 - L1ME LINE L1 -4480 1916 1742 266 320 183 6 chr2 251456168 251456343 -1800240 - MIR SINE MIR -46 216 11 197 284 45 23 chr2 251457044 251457132 -1799451 + MIR SINE MIR 43 132 -76 2218 110 3 7 chr2 251457387 251457696 -1798887 - AluSp SINE Alu -1 312 5 251 272 10 0 chr2 251458199 251458302 -1798281 + CT-rich Low_complexity Low_complexity 2 105 0 267 149 0 46 chr2 251458703 251458790 -1797793 + (TTCCC)n Simple_repeat Simple_repeat 4 86 0 1368 69 0 0 chr2 251458796 251459088 -1797495 + (CCCTG)n Simple_repeat Simple_repeat 1 292 0 5350 107 28 19 chr2 251459315 251459610 -1796973 - L1PB1 LINE L1 0 6867 6576 2119 152 3 0 chr2 251459610 251459906 -1796677 + AluSq SINE Alu 1 297 -16 5350 107 28 19 chr2 251459906 251460493 -1796090 - L1PB1 LINE L1 -291 6576 5977 * 10825 119 152 12 chr2 251460490 251461688 -1794895 - L1PB1 LINE L1 -3975 2888 1858 2281 110 7 0 chr2 251461688 251461989 -1794594 - AluY SINE Alu -8 303 1 10825 119 152 12 chr2 251461989 251462795 -1793788 - L1PB1 LINE L1 -5005 1858 605 1715 196 6 0 chr2 251462869 251463190 -1793393 - L1PB1 LINE L1 -6540 323 1 12477 179 27 69 chr2 251463252 251464825 -1791758 + L1MA6 LINE L1 2029 3666 -2870 1361 133 9 29 chr2 251464825 251465035 -1791548 - AluJo SINE Alu -22 290 85 12477 179 27 69 chr2 251465035 251467933 -1788650 + L1MA6 LINE L1 3666 6530 -6 435 288 99 54 chr2 251467939 251468161 -1788422 + L1ME LINE L1 4602 4833 -1313 272 278 65 0 chr2 251468207 251468315 -1788268 + L1P LINE L1 4882 4996 -1150 2403 67 0 0 chr2 251468536 251468860 -1787723 + AluY SINE Alu 1 324 0 445 256 119 70 chr2 251468906 251469277 -1787306 + L1ME LINE L1 5259 5647 -515 313 332 65 13 chr2 251469375 251469607 -1786976 + L1ME LINE L1 5551 5794 -376 2507 170 101 34 chr2 251469973 251470478 -1786105 - MER52A LTR ERV1 0 1755 1217 3992 37 33 12 chr2 251470493 251470982 -1785601 - L1PA5 LINE L1 -6 6148 5650 298 194 41 61 chr2 251471238 251471336 -1785247 - Charlie8 DNA MER1_type -2205 212 117 489 300 152 5 chr2 251471829 251472039 -1784544 + MIR SINE MIR 21 261 -1 694 223 124 93 chr2 251472569 251472923 -1783660 + MLT1J1 LTR MaLR 66 430 -16 543 297 168 10 chr2 251473017 251473219 -1783364 + MIR SINE MIR 8 241 -21 1236 222 97 36 chr2 251474270 251474662 -1781921 - MLT1C LTR MaLR -1 466 51 227 295 47 65 chr2 251476538 251476860 -1779723 - HAL1 LINE L1 -1334 1173 858 202 313 52 0 chr2 251477601 251477697 -1778886 + MIR SINE MIR 46 146 -62 310 205 24 48 chr2 251480478 251480561 -1776022 - L2 LINE L2 -5 3308 3228 1993 179 14 0 chr2 251480783 251481141 -1775442 - MLT1A1 LTR MaLR -2 363 1 1740 202 62 33 chr2 251481611 251482062 -1774521 + MLT1C LTR MaLR 4 467 0 1151 183 93 26 chr2 251482972 251483294 -1773289 - MSTD LTR MaLR 0 396 1 198 0 0 0 chr2 251483444 251483466 -1773117 + (TG)n Simple_repeat Simple_repeat 1 22 0 344 200 24 94 chr2 251483549 251483634 -1772949 - MER2 DNA MER2_type -262 83 5 210 118 0 0 chr2 251483637 251483671 -1772912 + (TATG)n Simple_repeat Simple_repeat 2 35 0 1396 200 144 45 chr2 251483671 251483702 -1772881 - MLT2B2 LTR ERVL -8 507 480 381 43 0 0 chr2 251483702 251483749 -1772834 + (TAGA)n Simple_repeat Simple_repeat 1 47 0 462 36 0 0 chr2 251483751 251483807 -1772776 + (TG)n Simple_repeat Simple_repeat 2 57 0 1396 200 144 45 chr2 251483807 251484217 -1772366 - MLT2B2 LTR ERVL -35 480 19 324 0 0 0 chr2 251484222 251484258 -1772325 + (CA)n Simple_repeat Simple_repeat 2 37 0 462 299 56 24 chr2 251484773 251485139 -1771444 + L1ME LINE L1 816 1172 -5033 * 585 300 31 28 chr2 251485138 251485428 -1771155 + L1ME LINE L1 1533 1823 -4573 2799 94 6 3 chr2 251485480 251485843 -1770740 + THE1B LTR MaLR 1 364 0 671 257 35 30 chr2 251485906 251486108 -1770475 - LTR16B LTR ERVL -2 462 260 1932 216 49 4 chr2 251486604 251487090 -1769493 - MER114 LTR ERV -125 523 16 237 318 56 8 chr2 251488571 251488697 -1767886 - MER41E LTR ERV1 -59 453 322 296 286 0 0 chr2 251489638 251489708 -1766875 + MIR3 SINE MIR 112 181 -27 312 252 66 80 chr2 251490910 251491061 -1765522 + MIR3 SINE MIR 11 159 -49 1682 185 39 14 chr2 251491366 251491728 -1764855 - L1MB3 LINE L1 -3 6180 5810 5983 55 3 17 chr2 251491799 251492562 -1764021 + SVA Other Other 635 1386 0 1858 202 5 3 chr2 251492570 251492956 -1763627 - L1MB3 LINE L1 -340 5831 5445 505 303 82 42 chr2 251492965 251493613 -1762970 - L1MEc LINE L1 -4937 1459 786 200 317 0 0 chr2 251494444 251494504 -1762079 + L2 LINE L2 3202 3261 -11 626 256 60 58 chr2 251494857 251495204 -1761379 + L1MC5 LINE L1 7448 7795 -166 1385 115 10 5 chr2 251495212 251495436 -1761147 - AluSq SINE Alu 0 310 86 236 288 0 14 chr2 251495481 251495554 -1761029 + L1MC5 LINE L1 7842 7913 -48 232 327 56 9 chr2 251496060 251496167 -1760416 + MIR SINE MIR 36 147 -61 2445 122 98 38 chr2 251496451 251496902 -1759681 + LTR12 LTR ERV1 1 478 -236 2130 92 3 46 chr2 251498684 251499010 -1757573 + AluSq SINE Alu 1 312 -1 219 329 71 32 chr2 251499258 251499413 -1757170 + L2 LINE L2 2928 3088 -184 1707 228 18 40 chr2 251501290 251501659 -1754924 - MER4C LTR ERV1 0 465 106 2084 89 41 7 chr2 251501659 251501950 -1754633 + AluSg1 SINE Alu 1 301 -8 1707 228 18 40 chr2 251501950 251502036 -1754547 - MER4C LTR ERV1 -359 106 20 576 341 99 45 chr2 251503838 251504796 -1751787 - L1ME3 LINE L1 -233 5929 4891 226 164 0 36 chr2 251505300 251505355 -1751228 + (TCTCTG)n Simple_repeat Simple_repeat 4 56 0 1809 151 0 17 chr2 251505880 251506179 -1750404 - AluJo SINE Alu -18 294 1 495 196 0 0 chr2 251506263 251506355 -1750228 - MER5A DNA MER1_type -83 106 15 2242 88 0 0 chr2 251508629 251508926 -1747657 - AluY SINE Alu -14 297 1 224 204 0 0 chr2 251509050 251509094 -1747489 - MIR SINE MIR -116 146 103 2155 104 3 0 chr2 251509560 251509859 -1746724 - AluSg SINE Alu -10 300 1 226 311 0 0 chr2 251511207 251511268 -1745315 + MIR SINE MIR 89 149 -59 638 257 55 25 chr2 251511554 251511756 -1744827 - MER58A DNA MER1_type -16 208 1 227 208 0 0 chr2 251518208 251518256 -1738327 - L2 LINE L2 -1901 1413 1366 2377 117 135 0 chr2 251518483 251518860 -1737723 + MSTA LTR MaLR 1 428 0 2624 152 27 0 chr2 251520378 251520792 -1735791 + MSTB LTR MaLR 1 425 -1 204 234 21 0 chr2 251520809 251520856 -1735727 + GA-rich Low_complexity Low_complexity 1 48 0 1770 241 61 0 chr2 251521396 251521836 -1734747 + MLT1C LTR MaLR 1 467 0 877 250 32 72 chr2 251521837 251522059 -1734524 + L1ME2 LINE L1 5616 5821 -343 2349 91 0 0 chr2 251522059 251522367 -1734216 + AluSq SINE Alu 1 308 -5 877 250 32 72 chr2 251522367 251522492 -1734091 + L1ME2 LINE L1 5821 5949 -215 253 356 141 11 chr2 251522856 251523126 -1733457 - L2 LINE L2 -1 3312 3008 241 340 82 12 chr2 251524794 251525050 -1731533 - MLT1J1 LTR MaLR -113 333 60 200 337 99 0 chr2 251525251 251525352 -1731231 + L3 LINE CR1 1154 1264 -313 1618 99 51 126 chr2 251527923 251528256 -1728327 + THE1B LTR MaLR 1 308 -56 534 150 0 0 chr2 251528257 251528337 -1728246 + AluS SINE Alu 1 80 -232 25 0 0 0 chr2 251528399 251528424 -1728159 + AT_rich Low_complexity Low_complexity 1 25 0 2133 50 64 0 chr2 251530510 251530790 -1725793 + AluY SINE Alu 1 298 -13 212 79 79 0 chr2 251531036 251531074 -1725509 + T-rich Low_complexity Low_complexity 4 44 0 1361 161 32 4 chr2 251531356 251531604 -1724979 + AluSx SINE Alu 50 304 -8 4713 206 92 57 chr2 251531964 251533155 -1723428 + MER52A LTR ERV1 2 1233 -522 3647 20 4 0 chr2 251533155 251533609 -1722974 - L1P LINE L1 -1437 4709 4254 1557 66 9 0 chr2 251533605 251533818 -1722765 + L1P LINE L1 4684 4898 -1248 * 324 298 0 0 chr2 251733836 251734007 -1522576 + (CA)n Simple_repeat Simple_repeat 1 171 0 1597 86 17 34 chr2 251734894 251735128 -1521455 + MER30 DNA MER1_type 1 230 0 558 219 19 0 chr2 251735129 251735234 -1521349 + MLT1A1 LTR MaLR 9 115 -250 486 356 47 28 chr2 251735425 251735742 -1520841 + L1 LINE L1 4341 4663 -1483 409 268 119 6 chr2 251736142 251736310 -1520273 + L1MCc LINE L1 19 205 -6218 226 307 18 48 chr2 251736576 251736742 -1519841 - SUBTEL_sa Satellite Satellite -11 163 3 1524 264 57 5 chr2 251740381 251740801 -1515782 - L1MB8 LINE L1 -94 6084 5643 967 218 9 23 chr2 251740801 251741021 -1515562 - MER46A DNA MER2_type 0 236 20 332 277 92 0 chr2 251741021 251741151 -1515432 - L1MB8 LINE L1 -530 5648 5507 539 388 47 7 chr2 251741849 251742125 -1514458 + HAL1b LINE L1 518 804 -544 1104 215 21 9 chr2 251742126 251742359 -1514224 + AluJb SINE Alu 1 236 -76 2331 114 141 5 chr2 251742422 251742799 -1513784 + MSTA LTR MaLR 1 428 0 1612 343 104 43 chr2 251743120 251744711 -1511872 + L1M4 LINE L1 2128 3815 -2331 234 318 0 0 chr2 251744821 251744953 -1511630 + (TG)n Simple_repeat Simple_repeat 1 132 0 450 259 65 71 chr2 251751826 251752178 -1504405 + L1MCc LINE L1 1554 1903 -5219 379 281 18 26 chr2 251752277 251752391 -1504192 + MER5C DNA MER1_type 43 155 -169 462 270 20 20 chr2 251752393 251752541 -1504042 + L1MCc LINE L1 1921 2068 -4863 278 202 0 10 chr2 251753173 251753272 -1503311 + (TG)n Simple_repeat Simple_repeat 1 98 0 483 306 74 60 chr2 251754173 251754351 -1502232 + L1MDa LINE L1 1314 1488 -5233 2005 102 3 7 chr2 251754351 251754666 -1501917 + AluY SINE Alu 1 314 0 483 306 74 60 chr2 251754666 251755594 -1500989 + L1MDa LINE L1 1488 2505 -4216 347 287 23 0 chr2 251755626 251755755 -1500828 + (TA)n Simple_repeat Simple_repeat 1 132 0 366 113 38 0 chr2 251755756 251755836 -1500747 + L1MB7 LINE L1 3865 3947 -2199 4409 198 24 25 chr2 251755856 251757763 -1498820 + L1MB7 LINE L1 4272 6177 -7 2415 37 0 7 chr2 251757802 251758096 -1498487 + AluY SINE Alu 1 292 -19 2412 132 72 10 chr2 251758150 251758553 -1498030 - MSTA LTR MaLR 0 428 1 2325 166 41 5 chr2 251759033 251759444 -1497139 + MSTB LTR MaLR 1 426 0 715 243 51 11 chr2 251759444 251759831 -1496752 - LTR54 LTR ERV1 -35 475 2 402 220 198 6 chr2 251759834 251760016 -1496567 + LTR16C LTR ERVL 274 490 -1 223 252 56 65 chr2 251760029 251760136 -1496447 - MIR SINE MIR -83 179 74 1689 155 3 48 chr2 251760434 251760743 -1495840 - AluJo SINE Alu -11 301 7 214 299 79 16 chr2 251761273 251761400 -1495183 + L2 LINE L2 3137 3271 -42 191 35 0 35 chr2 251761818 251761847 -1494736 + (CCCCAG)n Simple_repeat Simple_repeat 2 29 0 361 325 36 10 chr2 251762998 251763298 -1493285 - L1MC/D LINE L1 -749 5397 5217 781 308 108 42 chr2 251763397 251764320 -1492263 - L1MC/D LINE L1 -1367 4779 3796 467 302 58 12 chr2 251765878 251766050 -1490533 + L1MEc LINE L1 419 598 -5798 426 292 28 0 chr2 251766080 251766224 -1490359 + G-rich Low_complexity Low_complexity 2 149 0 208 219 0 0 chr2 251766280 251766321 -1490262 + (TCCA)n Simple_repeat Simple_repeat 4 44 0 611 235 134 0 chr2 251766343 251766492 -1490091 + MER96 DNA MER1_type? 7 175 0 357 292 124 0 chr2 251766494 251766607 -1489976 + L2 LINE L2 3141 3267 -5 457 286 44 1 chr2 251768154 251768369 -1488214 + L1MC/D LINE L1 5605 5837 -398 495 0 0 0 chr2 251768613 251768668 -1487915 + (TA)n Simple_repeat Simple_repeat 1 55 0 2114 106 0 0 chr2 251768825 251769158 -1487425 + AluSq SINE Alu 1 333 0 588 278 146 13 chr2 251770906 251771206 -1485377 - LTR16A LTR ERVL -49 401 68 282 330 69 44 chr2 251771580 251771783 -1484800 - ERVL LTR ERVL -771 4993 4786 3354 220 72 22 chr2 251772688 251774130 -1482453 - L1MB5 LINE L1 -8 6166 4653 182 280 53 40 chr2 251779358 251779433 -1477150 - MER5B DNA MER1_type -12 166 91 207 257 34 34 chr2 251780299 251780447 -1476136 + (CAACC)n Simple_repeat Simple_repeat 2 149 0 * 213 330 11 65 chr2 251780343 251780528 -1476055 + (CACCC)n Simple_repeat Simple_repeat 2 176 0 23 33 0 0 chr2 251780545 251780575 -1476008 + GC_rich Low_complexity Low_complexity 1 30 0 224 208 0 19 chr2 251780650 251780703 -1475880 + (CCG)n Simple_repeat Simple_repeat 2 53 0 31 26 0 0 chr2 251780789 251780827 -1475756 + GC_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr2 251781100 251781122 -1475461 + GC_rich Low_complexity Low_complexity 1 22 0 229 286 0 0 chr2 251781174 251781244 -1475339 + (CCCCG)n Simple_repeat Simple_repeat 5 74 0 203 269 15 45 chr2 251781952 251782019 -1474564 - L2 LINE L2 -49 3223 3159 1199 285 60 42 chr2 251785915 251786444 -1470139 - MER77 LTR ERV1 0 605 67 855 293 26 13 chr2 251786860 251787164 -1469419 - MER93a LTR ERV1 -2 400 93 1299 37 18 0 chr2 251787537 251787701 -1468882 + L1PA4 LINE L1 5989 6155 0 738 248 110 75 chr2 251788022 251788534 -1468049 - MER93a-int LTR ERV1 -197 4739 4203 1282 185 106 0 chr2 251788534 251788788 -1467795 - AluJo SINE Alu -31 281 1 738 248 110 75 chr2 251788788 251788859 -1467724 - MER93a-int LTR ERV1 -733 4203 4136 447 132 40 0 chr2 251788965 251789041 -1467542 - MER31-int LTR ERV1 -936 5395 5317 * 1415 207 57 20 chr2 251789029 251789477 -1467106 - MER31-int LTR ERV1 -1188 3748 3355 2170 223 96 70 chr2 251789497 251790214 -1466369 - MER31-int LTR ERV1 -1786 3150 2394 2522 42 7 0 chr2 251790214 251790521 -1466062 - AluY SINE Alu -2 309 1 2170 223 96 70 chr2 251790521 251790899 -1465684 - MER31-int LTR ERV1 -2542 2394 2027 1026 156 0 111 chr2 251794908 251795152 -1461431 + AluJb SINE Alu 86 302 -10 431 286 153 5 chr2 251795603 251795792 -1460791 - MLT1C LTR MaLR 0 467 251 832 185 67 0 chr2 251795795 251795973 -1460610 + MLT1A1 LTR MaLR 1 190 -175 518 118 0 0 chr2 251795977 251796053 -1460530 + MER52A LTR ERV1 1326 1401 -354 * 1181 104 79 0 chr2 251796050 251796252 -1460331 + MER52A LTR ERV1 1538 1755 0 592 124 19 75 chr2 251796252 251796413 -1460170 - MLT1C LTR MaLR -314 153 2 668 223 85 27 chr2 251797238 251797462 -1459121 + MER96B DNA MER1_type? 158 394 -23 240 311 59 25 chr2 251798306 251798425 -1458158 - MIR SINE MIR -79 183 61 478 247 16 65 chr2 251798439 251798625 -1457958 + HAL1 LINE L1 1428 1604 -903 180 0 0 0 chr2 251799185 251799205 -1457378 + (CAAT)n Simple_repeat Simple_repeat 1 20 0 233 283 0 0 chr2 251799225 251799285 -1457298 + HAL1 LINE L1 1625 1684 -823 26 30 0 0 chr2 251799308 251799341 -1457242 + AT_rich Low_complexity Low_complexity 1 33 0 1550 217 68 11 chr2 251799453 251800416 -1456167 - L1MB7 LINE L1 -15 6169 5109 404 319 103 67 chr2 251800417 251800894 -1455689 + HAL1 LINE L1 1701 2194 -313 234 247 57 95 chr2 251800949 251801107 -1455476 + HAL1b LINE L1 746 897 -451 1987 123 57 17 chr2 251801114 251801414 -1455169 + AluSx SINE Alu 1 312 0 189 107 0 0 chr2 251801419 251801447 -1455136 + (GGAA)n Simple_repeat Simple_repeat 4 31 0 389 300 113 19 chr2 251801810 251801970 -1454613 + L1MC/D LINE L1 5298 5472 -2336 195 42 0 0 chr2 251802320 251802344 -1454239 + (CA)n Simple_repeat Simple_repeat 2 25 0 623 309 40 38 chr2 251802431 251802716 -1453867 - L1MC5 LINE L1 -915 6893 6601 297 75 0 0 chr2 251802716 251802756 -1453827 + (TG)n Simple_repeat Simple_repeat 2 41 0 623 309 40 38 chr2 251802756 251802880 -1453703 - L1MC5 LINE L1 -1207 6601 6479 1222 345 59 67 chr2 251803118 251803979 -1452604 - L1M4c LINE L1 -614 1741 874 2403 80 0 10 chr2 251803979 251804293 -1452290 - AluY SINE Alu 0 311 1 1222 345 59 67 chr2 251804293 251804459 -1452124 - L1M4c LINE L1 -1481 874 1 237 378 7 7 chr2 251805199 251805342 -1451241 + HAL1 LINE L1 1 143 -2364 302 336 14 90 chr2 251805450 251805673 -1450910 + HAL1 LINE L1 231 436 -2071 223 323 47 13 chr2 251806041 251806140 -1450443 + MIR SINE MIR 70 146 -62 299 201 58 46 chr2 251808706 251808880 -1447703 + (CCCTG)n Simple_repeat Simple_repeat 4 179 0 869 263 157 8 chr2 251810412 251810808 -1445775 - MLT1C LTR MaLR -9 458 4 215 200 0 0 chr2 251811921 251811961 -1444622 - MIR SINE MIR -60 148 109 772 333 83 13 chr2 251813724 251814172 -1442411 + Charlie4a DNA MER1_type 18 496 -12 181 224 269 0 chr2 251814393 251814460 -1442123 - L2 LINE L2 -25 3288 3204 277 246 0 29 chr2 251817102 251817171 -1439412 + MIR SINE MIR 84 150 -112 323 283 20 0 chr2 251817427 251817526 -1439057 + MER53 DNA DNA 1 101 -88 2497 190 35 17 chr2 251817626 251818143 -1438440 - L1MB3 LINE L1 -9 6174 5649 312 141 42 14 chr2 251818154 251818225 -1438358 + MER53 DNA DNA 110 182 -7 236 295 26 0 chr2 251818501 251818579 -1438004 + MIR SINE MIR 53 132 -76 22 80 0 0 chr2 251820750 251820800 -1435783 + GC_rich Low_complexity Low_complexity 1 50 0 201 147 0 0 chr2 251829284 251829318 -1427265 + (TG)n Simple_repeat Simple_repeat 1 34 0 496 308 0 27 chr2 251830821 251831006 -1425577 + (CA)n Simple_repeat Simple_repeat 1 180 0 525 346 0 6 chr2 251831034 251831213 -1425370 + (CA)n Simple_repeat Simple_repeat 1 178 0 1079 103 0 0 chr2 251832435 251832580 -1424003 - AluSc SINE Alu -10 299 155 1303 293 37 12 chr2 251832795 251833263 -1423320 + L1M3a LINE L1 1 655 -5300 674 279 38 10 chr2 251833457 251833711 -1422872 + L1 LINE L1 245 743 -5212 1808 222 53 30 chr2 251833716 251834020 -1422563 + L1 LINE L1 559 855 -5110 2162 131 3 0 chr2 251834020 251834326 -1422257 + AluSq SINE Alu 1 307 -6 1808 222 53 30 chr2 251834326 251834846 -1421737 + L1 LINE L1 855 1430 -4535 2168 157 15 0 chr2 251834873 251835274 -1421309 + L1 LINE L1 3704 4110 -1924 2219 74 3 42 chr2 251835274 251835584 -1420999 - AluY SINE Alu -13 298 1 1510 143 4 16 chr2 251835607 251835859 -1420724 - L1PA13 LINE L1 -19 6144 5896 317 369 25 13 chr2 251835968 251836125 -1420458 - L1MCa LINE L1 -4042 2384 2226 267 103 0 0 chr2 251836140 251836179 -1420404 + (TTTC)n Simple_repeat Simple_repeat 1 39 0 2767 66 11 0 chr2 251840951 251841300 -1415283 + THE1A LTR MaLR 1 353 -2 225 322 70 9 chr2 251841696 251841811 -1414772 - L3 LINE CR1 -38 1539 1418 1404 221 96 9 chr2 251842997 251843435 -1413148 - MLT1D LTR MaLR -8 497 22 504 193 0 0 chr2 251844440 251844549 -1412034 + (CA)n Simple_repeat Simple_repeat 1 109 0 1734 210 65 13 chr2 251844563 251845046 -1411537 - L1MB3 LINE L1 -3 6180 5670 314 170 17 42 chr2 251846875 251847167 -1409416 + (TG)n Simple_repeat Simple_repeat 1 284 0 290 339 18 42 chr2 251847601 251847769 -1408814 + MIR SINE MIR 20 183 -79 550 258 78 36 chr2 251847813 251848147 -1408436 + MLT1C LTR MaLR 23 401 -104 314 155 141 0 chr2 251848148 251848219 -1408364 + L1MB2 LINE L1 5895 5975 -196 316 318 9 9 chr2 251848220 251848330 -1408253 - MLT1H1 LTR MaLR -445 110 1 283 136 0 0 chr2 251848445 251848489 -1408094 - MER57A LTR ERV1 -64 339 296 3361 193 13 11 chr2 251848845 251849539 -1407044 + MER44D DNA MER2_type 39 605 0 268 286 92 23 chr2 251850271 251850430 -1406153 - MLT1H1 LTR MaLR -28 565 380 851 268 7 1 chr2 251850498 251850733 -1405850 - MLT1H1 LTR MaLR -322 212 1 1211 197 77 32 chr2 251851025 251851197 -1405386 - MER33 DNA MER1_type -2261 324 130 2221 96 0 23 chr2 251851197 251851500 -1405083 - AluSq SINE Alu -16 297 2 1211 197 77 32 chr2 251851500 251851637 -1404946 - MER33 DNA MER1_type -2455 130 1 227 289 33 25 chr2 251851772 251851893 -1404690 + MLT1K LTR MaLR 465 586 -2 481 157 0 0 chr2 251852003 251852073 -1404510 - FLAM SINE Alu -21 122 53 816 198 72 66 chr2 251854361 251854680 -1401903 - MLT1C LTR MaLR -141 326 6 2229 169 43 31 chr2 251854771 251855192 -1401391 - MSTB LTR MaLR 0 426 1 309 352 32 0 chr2 251855500 251855625 -1400958 - MIR SINE MIR -25 237 109 185 105 0 26 chr2 251855666 251855704 -1400879 + (CA)n Simple_repeat Simple_repeat 1 37 0 207 224 47 9 chr2 251855708 251855815 -1400768 + (TA)n Simple_repeat Simple_repeat 2 112 0 2026 125 90 29 chr2 251855862 251856205 -1400378 + THE1B LTR MaLR 1 364 0 283 229 11 75 chr2 251856311 251856499 -1400084 + (GTGTG)n Simple_repeat Simple_repeat 2 177 0 564 185 30 7 chr2 251856605 251856740 -1399843 + MLT1A1 LTR MaLR 228 365 0 2042 111 24 0 chr2 251858763 251859051 -1397532 + AluSx SINE Alu 1 295 -17 321 280 83 16 chr2 251859337 251859530 -1397053 - L2 LINE L2 -260 3053 2848 253 271 0 61 chr2 251860479 251860660 -1395923 + G-rich Low_complexity Low_complexity 4 173 0 1213 229 19 36 chr2 251860921 251861249 -1395334 - MLT1A1 LTR MaLR -9 356 33 961 172 0 0 chr2 251861249 251861400 -1395183 + FRAM SINE Alu 1 151 -15 1213 229 19 36 chr2 251861400 251861433 -1395150 - MLT1A1 LTR MaLR -332 33 1 380 366 45 16 chr2 251863341 251863893 -1392690 - L1ME LINE L1 -396 5766 5197 1718 185 3 0 chr2 251865395 251865681 -1390902 + AluJb SINE Alu 1 287 -25 24 0 0 0 chr2 251866360 251866384 -1390199 + AT_rich Low_complexity Low_complexity 1 24 0 973 202 6 0 chr2 251866517 251866690 -1389893 + AluJo SINE Alu 120 293 -19 619 325 237 16 chr2 251867102 251867533 -1389050 + L2 LINE L2 2434 2959 -355 2846 275 58 50 chr2 251867543 251868078 -1388505 + L1ME3A LINE L1 2686 3215 -2931 2082 124 3 0 chr2 251868078 251868362 -1388221 + AluSq SINE Alu 3 290 -23 189 0 0 0 chr2 251868362 251868383 -1388200 + (CA)n Simple_repeat Simple_repeat 2 22 0 2846 275 58 50 chr2 251868389 251868743 -1387840 + L1ME3A LINE L1 3215 3565 -2581 2152 136 43 27 chr2 251868743 251869112 -1387471 + THE1C LTR MaLR 1 375 0 2846 275 58 50 chr2 251869112 251869457 -1387126 + L1ME3A LINE L1 3565 3906 -2240 216 0 0 0 chr2 251869457 251869481 -1387102 + (TG)n Simple_repeat Simple_repeat 1 24 0 2846 275 58 50 chr2 251869481 251869914 -1386669 + L1ME3A LINE L1 3906 4368 -1778 358 285 8 0 chr2 251869940 251870063 -1386520 + L1ME3A LINE L1 5119 5242 -904 1052 280 108 11 chr2 251870082 251870180 -1386403 + L1ME3A LINE L1 5658 5745 -425 1027 139 6 24 chr2 251870180 251870345 -1386238 + L1PA10 LINE L1 6002 6163 -5 1052 280 108 11 chr2 251870345 251870707 -1385876 + L1ME3A LINE L1 5745 6163 -7 360 307 156 0 chr2 251872846 251873025 -1383558 + MER63A DNA MER1_type 1 207 -3 993 153 2 6 chr2 251873340 251873695 -1382888 + (GGCTG)n Simple_repeat Simple_repeat 1 529 0 1113 166 0 2 chr2 251873720 251874246 -1382337 + (GGCTG)n Simple_repeat Simple_repeat 1 525 0 966 222 43 70 chr2 251874646 251874975 -1381608 + L1MB7 LINE L1 5865 6184 0 2094 125 16 0 chr2 251875004 251875309 -1381274 + AluSq SINE Alu 4 313 0 319 208 0 0 chr2 251875314 251875386 -1381197 + LTR30 LTR ERV1 553 624 -98 236 186 0 0 chr2 251875871 251875914 -1380669 - L3 LINE CR1 -5 1572 1530 228 224 0 0 chr2 251881289 251881338 -1375245 + (CA)n Simple_repeat Simple_repeat 2 50 0 2271 89 3 0 chr2 251882383 251882686 -1373897 + AluSg SINE Alu 1 304 -6 302 247 141 2 chr2 251882697 251882963 -1373620 - MLT1C LTR MaLR -72 395 48 344 219 133 23 chr2 251883906 251884034 -1372549 - MIR SINE MIR -113 149 8 335 253 61 49 chr2 251885666 251885820 -1370763 - MIR SINE MIR -55 153 9 203 100 0 25 chr2 251888028 251888068 -1368515 + (CAGGG)n Simple_repeat Simple_repeat 5 43 0 426 189 158 18 chr2 251889162 251889326 -1367257 + MLT1D LTR MaLR 313 499 -6 607 192 77 33 chr2 251891898 251892080 -1364503 + MER20 DNA MER1_type 30 219 0 1596 194 26 0 chr2 251892205 251892509 -1364074 + AluJb SINE Alu 1 312 0 1749 186 7 0 chr2 251892653 251892960 -1363623 + AluJo SINE Alu 1 309 -3 1284 127 0 0 chr2 252093040 252093221 -1163362 + AluSg/x SINE Alu 122 302 -10 22 88 0 0 chr2 252093221 252093278 -1163305 + AT_rich Low_complexity Low_complexity 1 57 0 2238 112 7 3 chr2 252093316 252093620 -1162963 - AluSq SINE Alu -8 305 1 2135 94 11 4 chr2 252093736 252094041 -1162542 - AluY SINE Alu 0 310 4 193 28 0 56 chr2 252094150 252094186 -1162397 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 1684 122 0 119 chr2 252094244 252094410 -1162173 - AluSx SINE Alu 0 302 196 1739 111 4 0 chr2 252094410 252094644 -1161939 - AluY SINE Alu -5 306 72 1684 122 0 119 chr2 252094644 252094820 -1161763 - AluSx SINE Alu -106 196 1 1595 179 19 38 chr2 252095362 252095675 -1160908 + AluJo SINE Alu 1 307 -5 1417 241 52 37 chr2 252096204 252096606 -1159977 + LTR2 LTR ERV1 42 449 0 233 281 62 0 chr2 252096760 252096856 -1159727 - L1P LINE L1 -4325 1821 1720 427 317 97 58 chr2 252096866 252097279 -1159304 - L1MCa LINE L1 -4961 1465 1037 247 299 35 62 chr2 252097531 252097675 -1158908 - L1MCa LINE L1 -5732 684 545 535 307 96 8 chr2 252098385 252098636 -1157947 + L2 LINE L2 2369 2641 -673 33 43 0 0 chr2 252099589 252099636 -1156947 + GC_rich Low_complexity Low_complexity 1 47 0 22 0 0 0 chr2 252099677 252099699 -1156884 + GC_rich Low_complexity Low_complexity 1 22 0 242 104 0 21 chr2 252099802 252099850 -1156733 + (CGGG)n Simple_repeat Simple_repeat 2 48 0 30 83 0 0 chr2 252099869 252099941 -1156642 + GC_rich Low_complexity Low_complexity 1 72 0 22 70 0 0 chr2 252100184 252100227 -1156356 + GC_rich Low_complexity Low_complexity 1 43 0 681 93 298 13 chr2 252105227 252105288 -1151295 - MER30 DNA MER1_type -36 194 152 203 79 26 0 chr2 252105288 252105326 -1151257 + (TTTTG)n Simple_repeat Simple_repeat 3 41 0 681 93 298 13 chr2 252105326 252105415 -1151168 - MER30 DNA MER1_type -78 152 1 1063 206 106 46 chr2 252106154 252106523 -1150060 - Charlie5 DNA MER1_type 0 2624 2234 266 154 0 31 chr2 252106527 252106592 -1149991 - Charlie5 DNA MER1_type -2507 105 43 241 312 82 35 chr2 252106848 252107018 -1149565 - L2 LINE L2 -3 3310 3133 2444 65 7 3 chr2 252107105 252107396 -1149187 - AluSp SINE Alu -21 292 1 2594 48 3 10 chr2 252108140 252108451 -1148132 - AluY SINE Alu -2 309 1 25 0 0 0 chr2 252108453 252108478 -1148105 + AT_rich Low_complexity Low_complexity 1 25 0 243 278 96 9 chr2 252109022 252109137 -1147446 + L2 LINE L2 2629 2753 -561 823 204 43 0 chr2 252110066 252110228 -1146355 - FAM SINE Alu -6 169 1 1848 171 3 16 chr2 252111320 252111624 -1144959 - AluJb SINE Alu -12 300 1 586 284 69 72 chr2 252111894 252112227 -1144356 - L1MC4a LINE L1 -813 7229 6825 2259 107 0 7 chr2 252112227 252112538 -1144045 + AluSq SINE Alu 1 309 0 586 284 69 72 chr2 252112538 252112744 -1143839 - L1MC4a LINE L1 -1217 6825 6620 1271 189 65 16 chr2 252112764 252113012 -1143571 + AluJb SINE Alu 9 268 -44 1330 284 190 7 chr2 252113215 252113961 -1142622 - L1MC4a LINE L1 -337 5825 5297 352 274 47 9 chr2 252113981 252114087 -1142496 - L1MC4a LINE L1 -1125 5021 4912 902 218 0 0 chr2 252114087 252114252 -1142331 - AluJb SINE Alu -14 298 134 1568 37 32 0 chr2 252114252 252114440 -1142143 - AluY SINE Alu -2 309 116 984 192 0 57 chr2 252114446 252114639 -1141944 - AluJo SINE Alu -113 199 18 429 328 103 56 chr2 252114640 252115097 -1141486 - L1MC4a LINE L1 -1230 4916 4425 2277 103 0 0 chr2 252115097 252115389 -1141194 + AluSc SINE Alu 1 292 -17 429 328 103 56 chr2 252115389 252115505 -1141078 - L1MC4a LINE L1 -1721 4425 4316 215 317 41 57 chr2 252115626 252115749 -1140834 - L2 LINE L2 -199 3073 2953 2099 72 4 4 chr2 252117879 252118141 -1138442 + AluY SINE Alu 36 297 -14 1535 191 76 3 chr2 252118337 252118625 -1137958 - AluJo SINE Alu -3 309 1 2124 136 0 0 chr2 252120120 252120407 -1136176 - AluSx SINE Alu -24 288 2 2267 114 3 7 chr2 252120628 252120935 -1135648 - AluSx SINE Alu -6 306 1 1825 119 54 22 chr2 252121369 252121646 -1134937 + AluJb SINE Alu 1 286 -26 361 273 67 18 chr2 252122270 252122435 -1134148 + MER5B DNA MER1_type 2 174 -4 302 242 222 10 chr2 252123058 252123157 -1133426 - MER5B DNA MER1_type -58 120 1 406 263 134 22 chr2 252126165 252126344 -1130239 - L1ME1 LINE L1 0 6166 5968 1697 181 24 21 chr2 252126512 252126800 -1129783 - AluJb SINE Alu -23 289 1 1717 150 29 11 chr2 252126865 252127138 -1129445 + AluJb SINE Alu 26 303 -9 747 168 62 0 chr2 252127257 252127418 -1129165 - L1MB4 LINE L1 -6 6174 6004 1463 281 162 18 chr2 252127484 252128625 -1127958 - L1MEc LINE L1 -4505 1891 586 268 207 17 0 chr2 252129179 252129237 -1127346 - L1MEc LINE L1 -6304 92 34 286 239 146 0 chr2 252130096 252130226 -1126357 - L1ME1 LINE L1 -1 6165 6017 644 246 190 52 chr2 252130292 252130722 -1125861 - L1M4 LINE L1 -1394 4752 4232 2692 55 0 0 chr2 252130722 252131033 -1125550 - AluY SINE Alu 0 311 1 644 246 190 52 chr2 252131033 252131139 -1125444 - L1M4 LINE L1 -1914 4232 4142 315 280 37 37 chr2 252131141 252131248 -1125335 - L1M4 LINE L1 -2289 3857 3751 224 138 62 0 chr2 252132941 252133006 -1123577 + GA-rich Low_complexity Low_complexity 2 70 0 435 232 141 6 chr2 252134583 252134760 -1121823 - L1MC4 LINE L1 -134 7908 7708 372 271 48 18 chr2 252134905 252135082 -1121501 - L1MC4 LINE L1 -875 7008 6756 240 327 28 9 chr2 252135185 252135292 -1121291 - MIR SINE MIR -43 219 111 188 386 29 0 chr2 252137232 252137302 -1119281 + MER5B DNA MER1_type 4 75 -103 941 163 0 12 chr2 252139489 252139649 -1116934 - AluSq SINE Alu -19 294 137 363 83 0 0 chr2 252139748 252139796 -1116787 + Alu SINE Alu 8 55 -247 2483 66 7 0 chr2 252139978 252140283 -1116300 - AluSp SINE Alu -6 307 1 2519 48 0 0 chr2 252144662 252144956 -1111627 + AluY SINE Alu 1 294 -17 2018 138 0 3 chr2 252145837 252146142 -1110441 - AluSg SINE Alu -6 304 1 398 305 24 49 chr2 252148784 252148948 -1107635 + L1MEd LINE L1 892 1051 -5068 2341 74 3 3 chr2 252149774 252150084 -1106499 + AluSx SINE Alu 2 311 -1 373 206 20 82 chr2 252152604 252152675 -1103908 + MLT1K LTR MaLR 446 505 -83 1710 110 0 0 chr2 252152675 252152902 -1103681 - AluSg SINE Alu -83 227 1 373 206 20 82 chr2 252152902 252152976 -1103607 + MLT1K LTR MaLR 505 582 -6 225 200 0 20 chr2 252153390 252153440 -1103143 + LTR16A1 LTR ERVL 398 446 -11 834 149 0 8 chr2 252153922 252154056 -1102527 - FLAM_C SINE Alu -10 133 1 206 338 70 21 chr2 252155356 252155498 -1101085 + L2 LINE L2 3119 3267 -46 228 163 82 0 chr2 252155865 252155914 -1100669 + tRNA-Arg-AGG tRNA tRNA 24 76 0 1737 141 47 13 chr2 252155939 252156237 -1100346 + AluJb SINE Alu 3 310 -2 1128 189 52 90 chr2 252157648 252157745 -1098838 + MLT1C-int LTR MaLR 1039 1138 -233 2431 60 0 0 chr2 252157745 252158044 -1098539 - AluY SINE Alu -12 299 1 1128 189 52 90 chr2 252158044 252158289 -1098294 + MLT1C-int LTR MaLR 1138 1368 -3 906 233 157 13 chr2 252158292 252158674 -1097909 + MLT1C LTR MaLR 1 437 -30 212 274 119 0 chr2 252162889 252162973 -1093610 - L2 LINE L2 -208 3105 3012 244 241 117 21 chr2 252165532 252165677 -1090906 + MLT1J1 LTR MaLR 264 422 -24 182 320 170 0 chr2 252167403 252167503 -1089080 + MER5B DNA MER1_type 1 117 -61 2134 130 0 0 chr2 252168147 252168446 -1088137 + AluSx SINE Alu 1 299 -13 1439 152 34 4 chr2 252168457 252168694 -1087889 + AluJb SINE Alu 39 282 -30 2171 95 0 0 chr2 252168698 252169010 -1087573 + AluSx SINE Alu 1 312 0 300 311 76 8 chr2 252169010 252169142 -1087441 + L1ME LINE L1 5430 5570 -596 414 0 0 0 chr2 252169213 252169259 -1087324 + (CA)n Simple_repeat Simple_repeat 2 47 0 950 114 29 132 chr2 252171208 252171480 -1085103 - Tigger7 DNA MER2_type -9 2482 2239 2238 87 0 37 chr2 252171480 252171801 -1084782 + AluY SINE Alu 1 309 -2 238 214 38 69 chr2 252171851 252171923 -1084660 + L1M4 LINE L1 4414 4482 -1664 2231 107 10 0 chr2 252171923 252172233 -1084350 + AluSq SINE Alu 1 313 0 238 214 38 69 chr2 252172233 252172291 -1084292 + L1M4 LINE L1 4482 4540 -1606 363 298 25 63 chr2 252172344 252172502 -1084081 + L1M4 LINE L1 2304 2455 -3691 2126 114 16 0 chr2 252172728 252173035 -1083548 + AluSx SINE Alu 1 312 0 2699 192 88 14 chr2 252173047 252173439 -1083144 - L1MB3 LINE L1 -27 6156 5692 1377 187 118 44 chr2 252173439 252173758 -1082825 + MLT1B LTR MaLR 1 352 -38 2149 81 42 0 chr2 252173758 252174043 -1082540 - AluSp SINE Alu -16 297 1 1377 187 118 44 chr2 252174043 252174086 -1082497 + MLT1B LTR MaLR 352 390 0 2699 192 88 14 chr2 252174086 252174361 -1082222 - L1MB3 LINE L1 -491 5692 5439 180 308 131 19 chr2 252177906 252178013 -1078570 + MIR SINE MIR 30 148 -60 490 219 0 12 chr2 252178045 252178209 -1078374 + CT-rich Low_complexity Low_complexity 3 164 0 541 189 6 24 chr2 252178254 252178418 -1078165 + CT-rich Low_complexity Low_complexity 3 163 0 267 240 0 0 chr2 252178420 252178470 -1078113 + C-rich Low_complexity Low_complexity 3 52 0 2463 38 0 0 chr2 252179444 252179736 -1076847 - AluY SINE Alu -19 292 1 405 361 124 59 chr2 252180054 252180281 -1076302 - L1MB3 LINE L1 -797 5349 5138 2240 86 0 7 chr2 252180281 252180573 -1076010 - AluSg SINE Alu -20 290 1 405 361 124 59 chr2 252180573 252180619 -1075964 - L1MB3 LINE L1 -1008 5138 5096 1835 148 0 32 chr2 252180619 252180930 -1075653 - AluSx SINE Alu -11 301 1 405 361 124 59 chr2 252180930 252181298 -1075285 - L1MB3 LINE L1 -1050 5096 4753 782 188 0 8 chr2 252181298 252181431 -1075152 + AluJo/FLAM SINE Alu 2 133 -169 2271 94 0 0 chr2 252181433 252181732 -1074851 + AluSc SINE Alu 1 299 -10 405 361 124 59 chr2 252181732 252181773 -1074810 - L1MB3 LINE L1 -1393 4753 4716 2047 116 14 0 chr2 252181773 252182065 -1074518 + AluSx SINE Alu 1 296 -16 405 361 124 59 chr2 252182065 252182101 -1074482 - L1MB3 LINE L1 -1430 4716 4578 477 101 58 0 chr2 252182198 252182267 -1074316 - AluJb SINE Alu -28 284 212 311 284 32 11 chr2 252182316 252182411 -1074172 - MIR3 SINE MIR -6 202 106 518 107 0 0 chr2 252184071 252184146 -1072437 - Alu SINE Alu -6 306 232 238 284 67 8 chr2 252184609 252184743 -1071840 - L1MEc LINE L1 -6143 253 112 2270 85 3 0 chr2 252184887 252185181 -1071402 - AluSx SINE Alu -17 295 1 1358 118 38 68 chr2 252185570 252185807 -1070776 - MER30 DNA MER1_type 0 230 1 310 292 79 79 chr2 252186492 252186923 -1069660 - L1MC4 LINE L1 -263 7545 7115 668 60 0 0 chr2 252187342 252187425 -1069158 + AluSg/x SINE Alu 166 248 -62 1383 126 5 0 chr2 252187425 252187639 -1068944 + AluY SINE Alu 83 297 -14 1691 92 4 4 chr2 252188669 252188896 -1067687 - AluSc SINE Alu -17 292 66 1816 128 0 0 chr2 252188900 252189149 -1067434 - AluSx SINE Alu -63 249 1 2296 102 0 10 chr2 252189337 252189651 -1066932 + AluSq SINE Alu 1 311 -2 302 229 42 139 chr2 252189861 252189885 -1066698 - L2 LINE L2 -6 3307 3282 1851 153 7 52 chr2 252189885 252190022 -1066561 + AluJo SINE Alu 1 143 -169 2233 118 20 0 chr2 252190022 252190327 -1066256 + AluSq SINE Alu 3 313 0 1851 153 7 52 chr2 252190327 252190496 -1066087 + AluJo SINE Alu 143 293 -19 302 229 42 139 chr2 252190496 252190535 -1066048 - L2 LINE L2 -31 3282 3241 2003 164 35 5 chr2 252190535 252190938 -1065645 + L1MB3 LINE L1 5768 6182 -1 302 229 42 139 chr2 252190938 252191039 -1065544 - L2 LINE L2 -72 3241 3158 1154 313 64 39 chr2 252191039 252191123 -1065460 + L1MEc LINE L1 34 114 -6282 2406 88 0 3 chr2 252191123 252191429 -1065154 + AluY SINE Alu 1 305 -6 1154 313 64 39 chr2 252191429 252192689 -1063894 + L1MEc LINE L1 114 1544 -4852 725 150 0 0 chr2 252192690 252192803 -1063780 + AluJo/FLAM SINE Alu 2 114 -198 2011 116 78 0 chr2 252192804 252193088 -1063495 - AluSx SINE Alu -6 306 1 46 0 0 0 chr2 252193095 252193141 -1063442 + AT_rich Low_complexity Low_complexity 1 46 0 398 276 128 36 chr2 252193143 252193421 -1063162 + L1MEc LINE L1 1527 1837 -4559 2209 131 3 10 chr2 252193421 252193735 -1062848 - AluSx SINE Alu 0 312 1 398 276 128 36 chr2 252193735 252193760 -1062823 + L1MEc LINE L1 1837 1858 -4538 1479 244 25 45 chr2 252193861 252194512 -1062071 + L1MEc LINE L1 2063 2667 -3548 222 266 62 0 chr2 252194656 252194720 -1061863 + MIR SINE MIR 125 192 -70 373 252 176 0 chr2 252195901 252196060 -1060523 - MER5A DNA MER1_type 0 189 3 274 214 61 31 chr2 252196756 252196854 -1059729 - MIR SINE MIR -116 146 46 2473 69 0 0 chr2 252199896 252200186 -1056397 + AluY SINE Alu 1 290 -21 2374 59 0 14 chr2 252200201 252200515 -1056068 + AluY SINE Alu 1 310 0 2238 112 7 3 chr2 252200631 252200935 -1055648 + AluSq SINE Alu 1 305 -8 22 88 0 0 chr2 252200973 252201030 -1055553 + AT_rich Low_complexity Low_complexity 1 57 0 2279 119 0 0 chr2 252201030 252201332 -1055251 - AluSx SINE Alu -10 302 1 823 153 0 0 chr2 252201350 252201481 -1055102 - FLAM_C SINE Alu -2 131 1 1736 151 0 15 chr2 252201918 252202183 -1054400 + AluJo SINE Alu 38 298 -14 1613 187 0 43 chr2 252202183 252202509 -1054074 + AluJo SINE Alu 1 312 0 2157 85 11 4 chr2 252203144 252203414 -1053169 + AluY SINE Alu 27 298 -13 713 197 8 0 chr2 252206222 252206349 -1050234 - FLAM_C SINE Alu -5 128 1 235 250 8 8 chr2 252209106 252209234 -1047349 + (CA)n Simple_repeat Simple_repeat 2 129 0 634 241 34 54 chr2 252209242 252209413 -1047170 - L1MC5 LINE L1 -291 7670 7506 1831 169 7 17 chr2 252209413 252209709 -1046874 - AluJo SINE Alu -19 293 1 634 241 34 54 chr2 252209709 252209831 -1046752 - L1MC5 LINE L1 -455 7506 7383 289 261 122 0 chr2 252210295 252210410 -1046173 + MER94 DNA DNA 2 130 -4 21 57 0 0 chr2 252210523 252210558 -1046025 + AT_rich Low_complexity Low_complexity 1 35 0 207 194 177 0 chr2 252210746 252210808 -1045775 + MIR SINE MIR 66 138 -124 2203 94 7 55 chr2 252211384 252211692 -1044891 - AluSx SINE Alu -19 293 1 2368 110 0 0 chr2 252211888 252212198 -1044385 - AluSg SINE Alu 0 310 1 191 301 79 42 chr2 252213548 252213764 -1042819 + L2 LINE L2 2505 2728 -586 355 332 88 21 chr2 252213784 252213977 -1042606 + MIR SINE MIR 44 249 -13 239 349 27 34 chr2 252214229 252214378 -1042205 - L2 LINE L2 -701 2613 2466 209 278 11 33 chr2 252214876 252214966 -1041617 + (CATATA)n Simple_repeat Simple_repeat 3 90 0 22 35 0 0 chr2 252215345 252215374 -1041209 + GC_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 252215428 252215449 -1041134 + GC_rich Low_complexity Low_complexity 1 21 0 31 26 0 0 chr2 252217103 252217141 -1039442 + GC_rich Low_complexity Low_complexity 1 38 0 301 295 195 7 chr2 252217300 252217449 -1039134 + L2 LINE L2 2553 2729 -585 396 297 71 26 chr2 252218297 252218452 -1038131 - HAL1b LINE L1 -438 910 749 1663 147 18 11 chr2 252218456 252218728 -1037855 - AluJb SINE Alu -9 303 30 245 282 148 20 chr2 252219461 252219610 -1036973 - L1ME LINE L1 -271 5899 5732 182 125 0 25 chr2 252219616 252219656 -1036927 + (TCCC)n Simple_repeat Simple_repeat 4 42 0 398 271 9 48 chr2 252219917 252220127 -1036456 - L1ME LINE L1 -777 5369 5168 643 87 0 39 chr2 252220137 252220240 -1036343 - AluSc SINE Alu -10 299 201 1889 114 0 0 chr2 252220241 252220487 -1036096 - AluSc SINE Alu -47 262 17 258 287 82 0 chr2 252220490 252220612 -1035971 - L1ME LINE L1 -983 5163 5032 507 203 31 8 chr2 252220617 252220745 -1035838 - FLAM_A SINE Alu -1 141 11 2469 70 0 0 chr2 252220885 252221186 -1035397 + AluY SINE Alu 1 301 -10 374 190 26 69 chr2 252221186 252221302 -1035281 + MLT1C LTR MaLR 203 313 -154 660 291 154 7 chr2 252221348 252221654 -1034929 - MER115 DNA AcHobo -251 442 92 344 223 0 78 chr2 252221846 252221949 -1034634 + L1MD2 LINE L1 6059 6153 -206 198 143 0 0 chr2 252221965 252222000 -1034583 + (CA)n Simple_repeat Simple_repeat 1 35 0 514 226 116 14 chr2 252222002 252222148 -1034435 + L1MD2 LINE L1 6137 6297 -62 217 310 14 0 chr2 252222420 252222491 -1034092 + CT-rich Low_complexity Low_complexity 1 72 0 2430 73 0 29 chr2 252222523 252222837 -1033746 - AluY SINE Alu -6 305 1 216 204 11 114 chr2 252224438 252224526 -1032057 - L2 LINE L2 -1051 2263 2185 1763 161 7 25 chr2 252224800 252225080 -1031503 - AluJo SINE Alu -17 295 21 1567 97 50 93 chr2 252225679 252225938 -1030645 + AluJo SINE Alu 34 281 -31 513 277 59 9 chr2 252227534 252227749 -1028834 + MIR SINE MIR 14 243 -19 948 209 58 4 chr2 252230596 252230821 -1025762 - MER8 DNA MER2_type -2 237 1 357 210 81 89 chr2 252231902 252232026 -1024557 - L1ME LINE L1 -448 5673 5551 2232 113 3 0 chr2 252232097 252232397 -1024186 - AluSp SINE Alu -12 301 1 415 241 184 0 chr2 252232751 252232979 -1023604 - L2 LINE L2 -519 2795 2526 2038 72 28 45 chr2 252233539 252233830 -1022753 - AluY SINE Alu 0 311 26 2190 127 3 0 chr2 252234025 252234324 -1022259 - AluSg SINE Alu -10 300 1 2557 61 0 0 chr2 252234650 252234947 -1021636 + AluY SINE Alu 1 297 -14 220 250 19 0 chr2 252235847 252235899 -1020684 + (TTCA)n Simple_repeat Simple_repeat 1 53 0 241 288 83 38 chr2 252236353 252236453 -1020130 - MLT1J LTR MaLR -350 161 52 391 333 104 16 chr2 252236453 252236762 -1019821 + MER46C DNA MER2_type 1 336 -2 241 288 83 38 chr2 252236762 252236793 -1019790 - MLT1J LTR MaLR -459 52 24 311 204 41 10 chr2 252237009 252237107 -1019476 + GA-rich Low_complexity Low_complexity 1 101 0 1749 120 86 0 chr2 252237225 252237492 -1019091 - AluJo SINE Alu -19 293 4 2023 129 7 10 chr2 252237797 252238100 -1018483 - AluSx SINE Alu -10 302 1 2586 71 0 0 chr2 252240468 252240779 -1015804 - AluY SINE Alu 0 311 1 2201 111 0 10 chr2 252240781 252241079 -1015504 - AluSg SINE Alu -15 295 1 1222 45 0 0 chr2 252241079 252241213 -1015370 - AluY SINE Alu -177 134 1 311 197 137 51 chr2 252241319 252241436 -1015147 - L1ME4a LINE L1 -11 6110 5984 2209 110 3 3 chr2 252242262 252242562 -1014021 - AluSp SINE Alu -13 300 1 2571 59 0 10 chr2 252242620 252242926 -1013657 + AluY SINE Alu 1 303 -8 919 230 104 11 chr2 252243751 252244195 -1012388 - L1MEc LINE L1 -2925 3290 2806 1141 233 80 30 chr2 252244197 252244714 -1011869 - L1MEc LINE L1 -3597 2618 2103 4471 161 31 41 chr2 252244744 252245590 -1010993 - L1MB7 LINE L1 -18 6166 5323 2404 101 0 0 chr2 252245590 252245887 -1010696 - AluSx SINE Alu -15 297 1 4471 161 31 41 chr2 252245887 252246102 -1010481 - L1MB7 LINE L1 -861 5323 5107 2638 46 0 7 chr2 252246328 252246632 -1009951 + AluY SINE Alu 1 302 -9 2969 201 14 54 chr2 252247375 252248186 -1008397 - L1M4 LINE L1 -971 5175 4398 405 297 157 38 chr2 252248190 252248426 -1008157 - HAL1b LINE L1 -700 648 385 400 185 17 42 chr2 252252382 252252501 -1004082 + LTR41 LTR ERVL 652 767 -6 399 222 0 31 chr2 252252506 252252668 -1003915 + (TATG)n Simple_repeat Simple_repeat 2 158 0 235 221 47 0 chr2 252252683 252252769 -1003814 + L1MC4 LINE L1 6615 6704 -1338 239 158 18 18 chr2 252253154 252253211 -1003372 + MIR SINE MIR 60 116 -92 1352 177 54 32 chr2 252255786 252256102 -1000481 - L1MB2 LINE L1 -165 6006 5684 917 217 43 0 chr2 252256103 252256287 -1000296 + MER58A DNA MER1_type 33 224 0 257 89 22 0 chr2 252256530 252256575 -1000008 + (TCCCC)n Simple_repeat Simple_repeat 3 48 0 322 305 123 0 chr2 252256775 252256929 -999654 + MIR SINE MIR 82 254 -8 2201 97 11 4 chr2 252261050 252261354 -995229 - AluSg SINE Alu 0 306 1 2356 113 0 10 chr2 252261559 252261861 -994722 - AluSx SINE Alu -13 299 1 2395 94 0 0 chr2 252261929 252262228 -994355 - AluSq SINE Alu -12 301 3 2058 151 3 3 chr2 252262450 252262755 -993828 - AluJo SINE Alu -7 305 1 2444 68 3 0 chr2 252264034 252264327 -992256 - AluSx SINE Alu -18 294 1 271 161 65 16 chr2 252264357 252264419 -992164 - Tigger2a DNA MER2_type -232 212 148 2977 127 62 2 chr2 252264603 252265100 -991483 + MER1A DNA MER1_type 1 527 0 1335 109 44 18 chr2 252265207 252265436 -991147 - Tigger2a DNA MER2_type -4 440 206 1331 131 15 10 chr2 252265436 252265634 -990949 + AluJb SINE Alu 101 299 -13 966 126 109 6 chr2 252265638 252265813 -990770 - Tigger2a DNA MER2_type -240 194 2 2238 99 14 0 chr2 252266723 252267016 -989567 + AluSx SINE Alu 1 297 -15 345 259 0 12 chr2 252267220 252267305 -989278 + L2 LINE L2 3166 3249 -23 321 219 135 0 chr2 252268027 252268123 -988460 - MER94 DNA DNA -24 110 2 348 227 0 0 chr2 252269971 252270090 -986493 + (ATG)n Simple_repeat Simple_repeat 3 121 0 605 156 46 0 chr2 252271335 252271444 -985139 + MER20 DNA MER1_type 104 217 -2 504 225 50 0 chr2 252273621 252273741 -982842 + MER58A DNA MER1_type 1 126 0 279 237 17 0 chr2 252273755 252273814 -982769 + MER58A DNA MER1_type 157 216 -8 3231 127 143 5 chr2 252275129 252275203 -981380 + Tigger3b DNA MER2_type 31 93 -2935 2001 138 0 7 chr2 252275203 252275486 -981097 - AluSx SINE Alu -4 308 28 3231 127 143 5 chr2 252275486 252276055 -980528 + Tigger3b DNA MER2_type 93 763 -468 1528 192 68 3 chr2 252276070 252276393 -980190 + Tigger3b DNA MER2_type 888 1231 0 245 234 0 39 chr2 252277050 252277127 -979456 + MER103 DNA DNA 10 83 -83 226 345 25 6 chr2 252279140 252279272 -977311 + MIR SINE MIR 41 175 -82 4138 261 81 62 chr2 252279421 252279931 -976652 + L1MEc LINE L1 34 533 -5863 2449 84 3 3 chr2 252279931 252280241 -976342 + AluSx SINE Alu 1 310 -2 4138 261 81 62 chr2 252280241 252281644 -974939 + L1MEc LINE L1 533 1999 -4397 2261 94 0 53 chr2 252281644 252281963 -974620 + AluSq SINE Alu 1 302 -11 4138 261 81 62 chr2 252281963 252282370 -974213 + L1MEc LINE L1 1999 2397 -3999 530 273 204 23 chr2 252282602 252283171 -973412 + L2 LINE L2 2643 3312 -1 286 173 0 19 chr2 252283171 252283223 -973360 + L2 LINE L2 3221 3271 -1 222 293 203 24 chr2 252283234 252283357 -973226 - MIR3 SINE MIR -5 203 59 282 261 109 29 chr2 252283480 252283618 -972965 + MIR3 SINE MIR 30 178 -30 188 135 27 0 chr2 252284685 252284722 -971861 + GA-rich Low_complexity Low_complexity 3 40 0 666 286 120 46 chr2 252285196 252285797 -970786 - L1MC5 LINE L1 -826 6982 6413 2260 111 3 0 chr2 252285797 252286095 -970488 - AluSx SINE Alu -13 299 1 666 286 120 46 chr2 252286095 252286669 -969914 - L1MC5 LINE L1 -1395 6413 5883 2465 60 0 0 chr2 252286669 252286967 -969616 - AluY SINE Alu -13 298 1 2336 97 0 0 chr2 252286967 252287266 -969317 - AluSx SINE Alu -13 299 1 3817 179 61 21 chr2 252287277 252287686 -968897 - L1MB7 LINE L1 0 6184 5793 2388 74 0 0 chr2 252287686 252287995 -968588 - AluSg SINE Alu -1 309 1 3817 179 61 21 chr2 252287995 252288495 -968088 - L1MB7 LINE L1 -391 5793 5239 1581 229 44 18 chr2 252288497 252288999 -967584 - L1M4 LINE L1 -816 5330 4816 2352 38 42 0 chr2 252289001 252289288 -967295 - AluY SINE Alu -12 299 1 251 190 0 0 chr2 252289342 252289400 -967183 - L1M4 LINE L1 -1321 4825 4768 707 91 0 40 chr2 252289405 252289504 -967079 - AluSq/x SINE Alu -204 109 15 1258 297 124 29 chr2 252289534 252290914 -965669 + L1ME LINE L1 4201 5718 -452 229 338 111 15 chr2 252292087 252292285 -964298 + L3 LINE CR1 1345 1561 -16 212 179 86 0 chr2 252301841 252301958 -954625 + (CGGG)n Simple_repeat Simple_repeat 3 129 0 207 300 0 14 chr2 252302130 252302200 -954383 + GA-rich Low_complexity Low_complexity 3 71 0 26 30 0 0 chr2 252303739 252303772 -952811 + AT_rich Low_complexity Low_complexity 1 33 0 2124 262 75 73 chr2 252304055 252304221 -952362 - L1ME2 LINE L1 -284 6675 6511 1790 97 131 11 chr2 252304221 252304489 -952094 - AluSg SINE Alu 0 300 1 2124 262 75 73 chr2 252304489 252305144 -951439 - L1ME2 LINE L1 -448 6511 5859 1590 166 55 7 chr2 252305144 252305434 -951149 - AluJo SINE Alu -8 304 1 2124 262 75 73 chr2 252305434 252305614 -950969 - L1ME2 LINE L1 -1100 5859 5681 2207 92 14 0 chr2 252305614 252305908 -950675 + AluSq SINE Alu 1 298 -15 2124 262 75 73 chr2 252305908 252307133 -949450 - L1ME2 LINE L1 -1278 5681 4035 2352 71 0 0 chr2 252307133 252307427 -949156 - AluY SINE Alu -17 294 1 2124 262 75 73 chr2 252307427 252307526 -949057 - L1ME2 LINE L1 -2924 4035 3938 253 313 66 4 chr2 252307580 252307807 -948776 - L1ME2 LINE L1 -2924 4017 3777 * 426 262 123 15 chr2 252307784 252308108 -948475 - L1ME2 LINE L1 -3640 3301 2943 1663 163 45 3 chr2 252308388 252308677 -947906 - AluJo SINE Alu -4 308 8 288 0 0 0 chr2 252308683 252308715 -947868 + (TA)n Simple_repeat Simple_repeat 2 33 0 2178 99 7 0 chr2 252308715 252308999 -947584 - AluSq SINE Alu -27 286 1 478 257 68 68 chr2 252309002 252309215 -947368 - L1ME2 LINE L1 -4862 2069 1857 2425 53 0 3 chr2 252309215 252309515 -947068 + AluY SINE Alu 1 299 -12 478 257 68 68 chr2 252309515 252309681 -946902 - L1ME2 LINE L1 -5074 1857 1692 832 177 0 0 chr2 252309681 252309811 -946772 + FLAM_C SINE Alu 2 131 -2 478 257 68 68 chr2 252309811 252310194 -946389 - L1ME2 LINE L1 -5239 1692 1173 373 293 114 28 chr2 252310616 252310960 -945623 - HAL1 LINE L1 -943 1564 1170 2304 100 0 0 chr2 252310960 252311261 -945322 - AluSx SINE Alu -11 301 1 373 293 114 28 chr2 252311261 252311373 -945210 - HAL1 LINE L1 -1337 1170 1069 1378 159 4 4 chr2 252311512 252311739 -944844 - AluJb SINE Alu -14 298 72 385 311 73 30 chr2 252315025 252315353 -941230 - MER115 DNA AcHobo -324 369 28 21 36 0 0 chr2 252315853 252315881 -940702 + AT_rich Low_complexity Low_complexity 1 28 0 249 291 47 0 chr2 252318011 252318183 -938400 + (CAGGA)n Simple_repeat Simple_repeat 1 180 0 231 240 0 0 chr2 252318398 252318448 -938135 - Charlie7 DNA MER1_type 0 2612 2563 1368 268 145 7 chr2 252318448 252318921 -937662 - L1M4 LINE L1 -3298 2848 2281 2191 85 7 23 chr2 252318921 252319228 -937355 - AluSc SINE Alu -2 307 6 1368 268 145 7 chr2 252319228 252319328 -937255 - L1M4 LINE L1 -3865 2281 2196 3509 233 31 17 chr2 252319331 252321052 -935531 - L1MD2 LINE L1 -230 6198 4444 367 369 19 40 chr2 252321426 252321751 -934832 - L1ME2 LINE L1 -6217 724 407 * 1172 224 57 5 chr2 252321742 252322161 -934422 - L1MD2 LINE L1 -4002 2394 1954 1124 178 14 19 chr2 252322175 252322389 -934194 + MER58A DNA MER1_type 3 215 -9 1095 265 132 36 chr2 252322398 252323067 -933516 - L1MD2 LINE L1 -4453 1943 1211 957 296 109 13 chr2 252323173 252323804 -932779 - L1MD2 LINE L1 -5124 1272 581 919 280 121 7 chr2 252323806 252324252 -932331 - L1MD2 LINE L1 -5865 531 35 381 334 115 23 chr2 252324258 252324377 -932206 - Charlie7 DNA MER1_type -2015 597 490 2200 120 0 13 chr2 252324377 252324693 -931890 - AluSx SINE Alu 0 312 1 381 334 115 23 chr2 252324693 252325043 -931540 - Charlie7 DNA MER1_type -2122 490 85 313 273 45 30 chr2 252325328 252325460 -931123 - MIR3 SINE MIR -7 201 68 496 309 75 19 chr2 252327577 252327884 -928699 - Charlie2 DNA MER1_type -249 2613 2290 212 254 62 77 chr2 252328086 252328216 -928367 - L2 LINE L2 -2741 573 446 341 189 5 100 chr2 252329987 252330177 -926406 + C-rich Low_complexity Low_complexity 3 174 0 256 225 23 64 chr2 252330192 252330365 -926218 + C-rich Low_complexity Low_complexity 3 168 0 478 311 94 14 chr2 252333203 252333415 -923168 + L1MC/D LINE L1 5259 5487 -2321 1726 56 0 5 chr2 252333448 252333664 -922919 - L1PA5 LINE L1 0 6154 5940 2147 117 0 0 chr2 252333730 252334028 -922555 - AluSx SINE Alu -14 298 1 417 199 20 0 chr2 252534064 252534210 -722373 + (CA)n Simple_repeat Simple_repeat 2 150 0 316 148 46 0 chr2 252534250 252534358 -722225 + (CA)n Simple_repeat Simple_repeat 2 114 0 1226 275 36 12 chr2 252534490 252534901 -721682 + MLT1C LTR MaLR 12 432 -35 203 245 0 19 chr2 252534916 252534969 -721614 + GA-rich Low_complexity Low_complexity 1 52 0 1238 173 14 0 chr2 252535217 252535425 -721158 + AluSg/x SINE Alu 90 300 -10 1270 139 9 5 chr2 252535425 252535648 -720935 + L1P LINE L1 5036 5259 -887 256 304 118 0 chr2 252535651 252535753 -720830 + HAL1 LINE L1 1430 1543 -964 495 186 23 139 chr2 252535759 252535931 -720652 + L1P LINE L1 3433 3584 -2562 249 177 0 0 chr2 252535940 252536002 -720581 - AluSp/q SINE Alu 0 303 242 1044 131 71 6 chr2 252536344 252536527 -720056 + L1MB2 LINE L1 5973 6167 -4 1875 133 44 0 chr2 252536534 252536827 -719756 + AluSx SINE Alu 1 306 -6 973 151 0 6 chr2 252536827 252536986 -719597 + AluSg/x SINE Alu 137 294 -18 197 65 32 0 chr2 252536994 252537025 -719558 + (TATAA)n Simple_repeat Simple_repeat 1 32 0 1490 166 69 0 chr2 252537029 252537319 -719264 + L1MB4 LINE L1 5828 6137 -43 471 98 0 3 chr2 252537377 252537582 -719001 + AluSg SINE Alu 17 288 -22 246 128 0 0 chr2 252537582 252537629 -718954 + L1MB4 LINE L1 6131 6177 -3 981 104 0 7 chr2 252537708 252537843 -718740 + AluSq/x SINE Alu 3 136 -177 2185 68 55 3 chr2 252537951 252538243 -718340 + AluY SINE Alu 3 309 -2 314 165 353 0 chr2 252539161 252539246 -717337 - FLAM_A SINE Alu -7 126 12 610 257 213 7 chr2 252539988 252540284 -716299 - L1M4 LINE L1 -913 5233 4877 216 0 0 0 chr2 252540322 252540346 -716237 + (TG)n Simple_repeat Simple_repeat 2 25 0 1154 245 102 3 chr2 252540401 252540772 -715811 + L1M4 LINE L1 2610 3017 -3129 975 179 74 18 chr2 252540919 252541257 -715326 + L1M4 LINE L1 4922 5328 -818 1623 191 10 3 chr2 252541258 252541561 -715022 + AluJb SINE Alu 1 305 -7 258 194 104 0 chr2 252541576 252541643 -714940 + MER53 DNA DNA 111 184 -5 1377 233 57 37 chr2 252541651 252541880 -714703 + L1MEc LINE L1 621 844 -5552 2207 85 0 0 chr2 252541880 252542163 -714420 + AluSc SINE Alu 1 283 -26 1377 233 57 37 chr2 252542163 252542423 -714160 + L1MEc LINE L1 844 1120 -5276 771 154 0 0 chr2 252542425 252542542 -714041 + FLAM_C SINE Alu 12 128 -15 2238 87 0 0 chr2 252542965 252543252 -713331 + AluSq SINE Alu 1 287 -26 340 122 98 49 chr2 252543307 252543389 -713194 - MER2 DNA MER2_type -137 208 123 640 195 51 0 chr2 252543389 252543507 -713076 + FLAM_C SINE Alu 1 124 -19 464 272 16 16 chr2 252543524 252543649 -712934 - MER2 DNA MER2_type -219 126 2 2211 51 0 7 chr2 252543924 252544199 -712384 + AluY SINE Alu 35 307 -4 469 248 127 0 chr2 252544205 252544362 -712221 + HAL1 LINE L1 1474 1650 -857 914 253 194 80 chr2 252544394 252544697 -711886 - MLT1G1 LTR MaLR 0 595 328 1547 211 58 31 chr2 252544697 252545057 -711526 - MLT1A2 LTR MaLR -4 370 1 914 253 194 80 chr2 252545057 252545279 -711304 - MLT1G1 LTR MaLR -267 328 10 1947 138 7 3 chr2 252545693 252545991 -710592 + AluSx SINE Alu 1 299 -13 1121 142 0 0 chr2 252545991 252546160 -710423 + AluSg/x SINE Alu 132 300 -10 1589 123 0 0 chr2 252546291 252546511 -710072 - AluSx SINE Alu -91 221 2 240 320 88 0 chr2 252546578 252546703 -709880 - MLT1I LTR MaLR 0 409 274 313 312 167 34 chr2 252546979 252547303 -709280 + HAL1 LINE L1 374 740 -1767 300 264 45 97 chr2 252547360 252547515 -709068 + HAL1 LINE L1 863 1009 -1498 508 125 0 0 chr2 252547592 252547664 -708919 + FRAM/FAM SINE Alu 1 71 -105 197 191 131 0 chr2 252548451 252548535 -708048 + MIR3 SINE MIR 62 156 -52 313 234 0 58 chr2 252549327 252549464 -707119 + (CGGGG)n Simple_repeat Simple_repeat 1 129 0 1746 175 46 1 chr2 252549569 252550110 -706473 - L1M3 LINE L1 -600 5583 5021 1360 247 77 15 chr2 252550115 252550593 -705990 - L1M4 LINE L1 -1016 5130 4623 2428 107 33 38 chr2 252550677 252551043 -705540 - THE1B LTR MaLR 0 364 1 298 318 23 16 chr2 252551057 252551186 -705397 - L1ME LINE L1 -5935 135 6 2309 45 0 7 chr2 252551250 252551567 -705016 - AluY SINE Alu 0 315 1 904 81 0 8 chr2 252551762 252551886 -704697 + AluSc SINE Alu 128 250 -59 1885 113 0 4 chr2 252551886 252552152 -704431 + AluSc SINE Alu 45 309 0 385 167 0 14 chr2 252552160 252552232 -704351 - L1M3 LINE L1 -484 5687 5617 1784 187 17 31 chr2 252552236 252552595 -703988 + MSTD LTR MaLR 2 355 -41 4571 52 18 6 chr2 252552595 252553465 -703118 - MER11A LTR ERVK 0 1266 245 2222 101 0 3 chr2 252553811 252554108 -702475 - AluSx SINE Alu -15 297 2 299 335 46 0 chr2 252554282 252554420 -702163 - MIR SINE MIR -64 144 20 183 367 20 0 chr2 252554436 252554534 -702049 + MIR SINE MIR 25 124 -138 368 274 82 14 chr2 252554672 252554735 -701848 - MIR SINE MIR 0 262 205 2229 86 3 3 chr2 252554735 252555038 -701545 + AluSc SINE Alu 1 303 -6 368 274 82 14 chr2 252555038 252555120 -701463 - MIR SINE MIR -57 205 107 1903 235 87 5 chr2 252555120 252555728 -700855 - L1M4 LINE L1 -2444 3702 3045 1082 131 0 6 chr2 252555729 252555897 -700686 - AluSg/x SINE Alu 0 312 146 363 327 65 25 chr2 252556056 252556255 -700328 - HAL1 LINE L1 -1554 953 747 319 253 46 0 chr2 252556878 252556965 -699618 + MIR SINE MIR 23 113 -95 180 246 101 14 chr2 252557148 252557217 -699366 - MIR SINE MIR -78 184 110 1541 188 29 26 chr2 252557250 252557558 -699025 + AluJb SINE Alu 1 309 -3 2191 92 0 29 chr2 252557596 252557911 -698672 + AluSg SINE Alu 1 306 -4 1984 146 0 0 chr2 252558111 252558412 -698171 - AluSx SINE Alu -11 301 1 294 158 35 0 chr2 252558524 252558581 -698002 - L2 LINE L2 -3 3269 3211 2165 112 0 7 chr2 252560187 252560490 -696093 + AluSx SINE Alu 1 301 -11 436 333 69 20 chr2 252564177 252564582 -692001 + L1M4 LINE L1 3627 4051 -2095 236 291 17 51 chr2 252564725 252564900 -691683 + L1M4 LINE L1 4540 4708 -1438 2156 63 53 13 chr2 252565129 252565428 -691155 + AluY SINE Alu 1 311 0 1445 116 9 0 chr2 252565577 252565793 -690790 + MER47A DNA MER2_type 35 252 -114 596 14 14 0 chr2 252565793 252565864 -690719 + AluY SINE Alu 13 84 -227 1061 184 15 10 chr2 252566094 252566300 -690283 + AluJo SINE Alu 2 208 -104 1574 214 3 3 chr2 252566321 252566629 -689954 + AluJo SINE Alu 1 308 -4 728 241 115 14 chr2 252566751 252566895 -689688 - L1MA9 LINE L1 0 6312 6184 264 59 0 0 chr2 252566895 252566929 -689654 + (TG)n Simple_repeat Simple_repeat 1 34 0 728 241 115 14 chr2 252566929 252567265 -689318 - L1MA9 LINE L1 -128 6184 5771 1007 189 26 5 chr2 252567276 252567467 -689116 - AluJo SINE Alu -24 288 94 255 175 0 0 chr2 252567593 252567633 -688950 - Alu SINE Alu -261 40 1 409 170 71 9 chr2 252567633 252567745 -688838 - L1 LINE L1 -1478 4668 4550 2368 72 0 3 chr2 252567822 252568129 -688454 + AluY SINE Alu 1 306 -5 360 259 151 6 chr2 252568636 252568802 -687781 - MIR SINE MIR -45 217 28 2015 129 10 0 chr2 252568912 252569215 -687368 + AluSx SINE Alu 1 306 -6 2092 110 14 0 chr2 252575802 252576079 -680504 + AluSq SINE Alu 1 284 -29 181 77 0 0 chr2 252576079 252576105 -680478 + (CAAA)n Simple_repeat Simple_repeat 2 180 0 2092 110 14 0 chr2 252576105 252576119 -680464 + AluSq SINE Alu 284 296 -17 323 286 121 6 chr2 252576186 252576368 -680215 + L1MC2 LINE L1 6125 6327 -17 1885 147 0 13 chr2 252576372 252576684 -679899 + AluSp SINE Alu 1 308 -5 1411 107 5 0 chr2 252577008 252577195 -679388 - AluSg/x SINE Alu -39 271 84 22 0 0 0 chr2 252580131 252580153 -676430 + GC_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 252580323 252580344 -676239 + GC_rich Low_complexity Low_complexity 1 21 0 26 30 0 0 chr2 252580415 252580448 -676135 + GC_rich Low_complexity Low_complexity 1 33 0 301 278 82 0 chr2 252580991 252581088 -675495 - MLT1K LTR MaLR -30 558 454 1342 174 168 9 chr2 252582072 252582406 -674177 + MSTB LTR MaLR 1 387 -39 2255 96 0 3 chr2 252582406 252582709 -673874 + AluSq SINE Alu 1 302 -11 2436 66 0 0 chr2 252585607 252585912 -670671 - AluY SINE Alu -6 305 1 1315 87 0 6 chr2 252586482 252586655 -669928 - AluSp SINE Alu -141 172 1 1646 153 7 51 chr2 252586675 252586970 -669613 - AluJb SINE Alu -30 282 1 306 115 0 0 chr2 252586972 252587024 -669559 + L1MB7 LINE L1 6114 6165 -19 2042 125 0 122 chr2 252587340 252587724 -668859 - MER1B DNA MER1_type 0 337 1 1521 117 4 47 chr2 252588212 252588505 -668078 - AluSx SINE Alu 0 312 56 2188 120 3 0 chr2 252589821 252590130 -666453 + AluSq SINE Alu 1 310 -3 22 35 0 0 chr2 252591575 252591604 -664979 + GC_rich Low_complexity Low_complexity 1 29 0 277 236 7 57 chr2 252591625 252591765 -664818 + C-rich Low_complexity Low_complexity 4 136 0 1285 186 57 4 chr2 252591873 252592217 -664366 - MLT2B2 LTR ERVL -108 407 3 481 254 18 0 chr2 252592223 252592333 -664250 - MER81 DNA DNA -1 113 2 664 327 121 8 chr2 252592334 252592722 -663861 + L1MD2 LINE L1 5501 5932 -427 751 174 0 0 chr2 252592734 252592855 -663728 - FLAM_A SINE Alu -12 121 1 392 327 81 65 chr2 252592855 252593090 -663493 + L1ME1 LINE L1 5907 6148 -18 2003 139 13 0 chr2 252593090 252593392 -663191 - AluSx SINE Alu -6 306 1 392 327 81 65 chr2 252593392 252593404 -663179 + L1ME1 LINE L1 6148 6158 -8 245 186 0 17 chr2 252593427 252593486 -663097 - L1MC5 LINE L1 -306 7655 7598 2100 83 19 35 chr2 252594944 252595257 -661326 - AluY SINE Alu -3 308 1 749 130 28 107 chr2 252596707 252596862 -659721 - MER63 DNA MER1_type -4 1058 923 1501 185 16 30 chr2 252596862 252597165 -659418 + AluJb SINE Alu 5 303 -9 749 130 28 107 chr2 252597165 252597225 -659358 - MER63 DNA MER1_type -139 923 860 2247 195 79 9 chr2 252597227 252597771 -658812 + MER54A LTR ERVL 1 582 -319 2075 145 23 33 chr2 252597772 252598093 -658490 + MER75 DNA T2_type 1 319 -195 2258 98 0 0 chr2 252598093 252598388 -658195 - AluSx SINE Alu -17 295 1 2075 145 23 33 chr2 252598388 252598458 -658125 + MER75 DNA T2_type 319 388 -126 1011 181 0 0 chr2 252598458 252598624 -657959 - AluJb SINE Alu -10 302 137 824 95 7 0 chr2 252598624 252598761 -657822 + MER75 DNA T2_type 367 504 0 1790 194 71 0 chr2 252598844 252599225 -657358 + MER47B DNA MER2_type 11 418 0 1119 105 58 0 chr2 252599243 252599433 -657150 + L1MA5A LINE L1 6097 6297 0 2102 127 3 0 chr2 252599442 252599742 -656841 + AluSx SINE Alu 2 302 -10 227 160 0 20 chr2 252599742 252599792 -656791 + MER54B LTR ERVL 744 792 -1 876 204 9 80 chr2 252600912 252601138 -655445 - AluJo SINE Alu -102 210 1 285 197 0 164 chr2 252601535 252601748 -654835 + GA-rich Low_complexity Low_complexity 1 178 0 411 264 0 84 chr2 252601805 252602164 -654419 + GA-rich Low_complexity Low_complexity 1 328 0 209 182 0 23 chr2 252604042 252604086 -652497 - L2 LINE L2 -4 3268 3226 226 167 0 144 chr2 252604927 252605017 -651566 + LTR50 LTR ERVL 390 466 -329 415 217 144 18 chr2 252605084 252605263 -651320 + LTR50 LTR ERVL 585 771 -2 181 337 119 0 chr2 252605428 252605529 -651054 - MIR SINE MIR -147 115 3 939 201 93 31 chr2 252605999 252606063 -650520 + L1MB7 LINE L1 4787 4846 -1300 1620 156 30 40 chr2 252606063 252606365 -650218 - AluJb SINE Alu -13 299 1 939 201 93 31 chr2 252606365 252606589 -649994 + L1MB7 LINE L1 4846 5093 -1053 21 36 0 0 chr2 252606741 252606769 -649814 + AT_rich Low_complexity Low_complexity 1 28 0 1048 173 0 0 chr2 252608989 252609151 -647432 - FRAM SINE Alu -17 159 1 2796 144 68 124 chr2 252609151 252609874 -646709 + L1MB7 LINE L1 5082 5746 -438 2369 97 0 0 chr2 252609874 252610182 -646401 + AluSc SINE Alu 1 308 -1 2796 144 68 124 chr2 252610182 252610543 -646040 + L1MB7 LINE L1 5746 6126 -58 282 56 0 0 chr2 252610544 252610580 -646003 + (TATG)n Simple_repeat Simple_repeat 3 38 0 2183 88 0 3 chr2 252610582 252610896 -645687 - AluSp SINE Alu 0 313 1 1646 153 7 51 chr2 252610916 252611211 -645372 - AluJb SINE Alu -30 282 1 276 124 0 0 chr2 252611213 252611272 -645311 + L1MB7 LINE L1 6107 6165 -1 2042 125 0 122 chr2 252611581 252611965 -644618 - MER1B DNA MER1_type 0 337 1 1973 135 0 10 chr2 252612453 252612793 -643790 - AluSx SINE Alu 0 312 1 2606 25 0 37 chr2 252612954 252613277 -643306 - AluY SINE Alu 0 311 1 2535 51 0 6 chr2 252615507 252615820 -640763 + AluY SINE Alu 1 311 0 180 327 35 71 chr2 252617433 252617546 -639037 - MIR SINE MIR -120 142 34 2280 93 6 26 chr2 252617925 252618236 -638347 + AluSq SINE Alu 9 313 0 1823 153 27 14 chr2 252619643 252619938 -636645 - AluJb SINE Alu -13 299 1 2143 134 0 3 chr2 252620030 252620329 -636254 - AluJo SINE Alu -14 298 1 227 226 0 85 chr2 252620580 252620686 -635897 + G-rich Low_complexity Low_complexity 2 98 0 2322 104 7 13 chr2 252624310 252624618 -631965 + AluSx SINE Alu 1 306 -6 218 251 232 19 chr2 252625926 252626189 -630394 - L2 LINE L2 -621 2693 2375 1632 187 14 0 chr2 252626724 252627013 -629570 + AluJo SINE Alu 1 293 -19 22 35 0 0 chr2 252627457 252627486 -629097 + GC_rich Low_complexity Low_complexity 1 29 0 217 197 28 0 chr2 252629993 252630064 -626519 + GA-rich Low_complexity Low_complexity 1 73 0 1878 68 0 0 chr2 252631349 252631571 -625012 + AluY SINE Alu 87 308 -3 2226 114 0 3 chr2 252631620 252631917 -624666 + AluSq SINE Alu 1 296 -17 2388 103 0 6 chr2 252633218 252633530 -623053 + AluSg SINE Alu 1 310 0 2572 58 0 0 chr2 252633667 252633961 -622622 - AluY SINE Alu -17 294 1 2148 102 18 0 chr2 252633970 252634253 -622330 - AluSx SINE Alu -24 288 1 2291 103 0 7 chr2 252634341 252634641 -621942 - AluSx SINE Alu -12 300 3 609 240 24 0 chr2 252634651 252634776 -621807 - FLAM_A SINE Alu -1 132 5 21 0 0 0 chr2 252634887 252634908 -621675 + AT_rich Low_complexity Low_complexity 1 21 0 2160 119 0 0 chr2 252635260 252635546 -621037 + AluSx SINE Alu 14 299 -13 1575 138 0 76 chr2 252636028 252636304 -620279 + AluJb SINE Alu 1 255 -57 1793 151 42 7 chr2 252636340 252636624 -619959 - AluSx SINE Alu -18 294 1 2314 79 0 20 chr2 252636624 252636916 -619667 - AluSg SINE Alu -24 286 1 1499 159 20 57 chr2 252636916 252637212 -619371 - AluJo SINE Alu -7 305 21 2266 97 0 32 chr2 252637276 252637585 -618998 - AluSg SINE Alu -11 299 1 870 96 0 15 chr2 252637989 252638124 -618459 - FLAM_C SINE Alu 0 133 1 299 87 0 0 chr2 252642037 252642083 -614500 - Alu SINE Alu 0 302 257 1657 189 0 10 chr2 252642083 252642374 -614209 + AluJo SINE Alu 14 301 -11 797 203 72 0 chr2 252646282 252646435 -610148 - FRAM SINE Alu -15 161 1 1832 142 18 4 chr2 252647319 252647623 -608960 - AluSq SINE Alu 0 308 1 2299 104 0 0 chr2 252647673 252647972 -608611 + AluY SINE Alu 1 299 -12 1896 154 41 10 chr2 252647984 252648277 -608306 + AluJb SINE Alu 1 302 -10 2529 62 3 3 chr2 252648373 252648680 -607903 + AluY SINE Alu 1 307 -4 1415 214 17 17 chr2 252648737 252649027 -607556 - AluJo SINE Alu -20 292 3 1850 138 0 72 chr2 252649193 252649337 -607246 + AluSx SINE Alu 1 112 -200 2356 67 0 3 chr2 252649337 252649661 -606922 + AluY SINE Alu 1 323 0 1850 138 0 72 chr2 252649661 252649834 -606749 + AluSx SINE Alu 112 296 -16 626 358 28 58 chr2 252649964 252650300 -606283 - L1ME4a LINE L1 -113 6008 5688 1779 189 0 3 chr2 252650300 252650591 -605992 - AluJb SINE Alu -14 298 9 626 358 28 58 chr2 252650591 252650718 -605865 - L1ME4a LINE L1 -433 5688 5559 2531 73 10 0 chr2 252651093 252651393 -605190 + AluY SINE Alu 1 303 -8 2568 60 0 0 chr2 252651491 252651791 -604792 + AluY SINE Alu 1 300 -11 1772 157 0 41 chr2 252651896 252652190 -604393 + AluJo SINE Alu 1 282 -30 29 0 0 0 chr2 252652208 252652237 -604346 + AT_rich Low_complexity Low_complexity 1 29 0 2066 101 58 0 chr2 252652455 252652732 -603851 - AluSx SINE Alu -19 293 1 1792 160 3 33 chr2 252653258 252653558 -603025 - AluJb SINE Alu -21 291 1 431 220 28 9 chr2 252653893 252654002 -602581 - L1ME LINE L1 -463 5658 5548 375 278 10 0 chr2 252654884 252654981 -601602 + MER5A DNA MER1_type 38 135 -54 319 109 0 1 chr2 252655141 252655202 -601381 + AluSp SINE Alu 1 44 -258 2283 64 7 4 chr2 252655202 252655509 -601074 + AluSp SINE Alu 21 313 0 1330 146 0 40 chr2 252655817 252656043 -600540 - AluJo SINE Alu -21 291 75 316 234 72 0 chr2 252656043 252656154 -600429 + L1M4 LINE L1 2236 2354 -3792 2182 121 17 0 chr2 252656282 252656579 -600004 - AluSx SINE Alu -10 302 1 2076 212 173 5 chr2 252656743 252657395 -599188 + L1MC4 LINE L1 6568 7329 -713 565 191 10 0 chr2 252657415 252657518 -599065 - AluJo SINE Alu -91 221 121 741 138 55 0 chr2 252657577 252657686 -598897 - AluJo SINE Alu -189 123 9 1013 251 60 21 chr2 252657698 252658032 -598551 + L1MC4 LINE L1 7324 7670 -372 321 243 66 1 chr2 252658072 252658165 -598418 + L1MC4 LINE L1 7907 7995 0 1455 174 67 45 chr2 252658309 252658665 -597918 + L1MB7 LINE L1 5805 6168 -16 1615 127 146 0 chr2 252658806 252659073 -597510 + AluSx SINE Alu 1 306 -6 203 100 0 25 chr2 252659128 252659168 -597415 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 2388 77 0 3 chr2 252659236 252659535 -597048 + AluY SINE Alu 1 298 -13 642 221 8 16 chr2 252659663 252659790 -596793 + MER2 DNA MER2_type 1 126 -219 620 195 51 0 chr2 252659807 252659925 -596658 - FLAM_C SINE Alu -19 124 1 377 122 98 49 chr2 252659925 252660007 -596576 + MER2 DNA MER2_type 123 208 -137 2354 87 0 0 chr2 252660062 252660349 -596234 - AluSq SINE Alu -26 287 1 348 220 122 70 chr2 252660827 252661041 -595542 - HAL1 LINE L1 -289 2218 1994 325 213 75 0 chr2 252661345 252661425 -595158 + LTR8 LTR ERV1 497 582 -109 464 111 0 0 chr2 252661498 252661570 -595013 + AluSp/q SINE Alu 242 313 0 682 146 23 140 chr2 252661570 252661741 -594842 - L1P LINE L1 -2563 3583 3433 236 304 118 0 chr2 252661747 252661849 -594734 - HAL1 LINE L1 -964 1543 1430 1353 139 9 5 chr2 252661852 252662075 -594508 - L1P LINE L1 -887 5259 5036 1837 167 13 7 chr2 252662075 252662375 -594208 - AluSx SINE Alu -10 302 1 11828 192 19 10 chr2 252662397 252664864 -591719 - L1PA12 LINE L1 -2702 4882 2395 1379 138 104 56 chr2 252664881 252665149 -591434 - AluSx SINE Alu -12 300 20 2130 117 7 3 chr2 252665149 252665440 -591143 - AluSx SINE Alu -20 292 1 3370 261 73 25 chr2 252665444 252666418 -590165 - L1PA12 LINE L1 -6552 1029 9 448 263 36 84 chr2 252666953 252667146 -589437 - L1MC4a LINE L1 -1867 5941 5761 1814 167 0 7 chr2 252667146 252667434 -589149 - AluJb SINE Alu -26 286 1 448 263 36 84 chr2 252667434 252667491 -589092 - L1MC4a LINE L1 -2047 5761 5703 638 236 49 80 chr2 252667569 252667857 -588726 - HAL1 LINE L1 -2227 280 2 365 259 54 0 chr2 252668649 252668761 -587822 + MER112 DNA MER1_type 83 200 -60 1226 85 0 0 chr2 252669679 252669832 -586751 + AluSq SINE Alu 1 153 -160 538 111 0 0 chr2 252669832 252669904 -586679 + AluSg/x SINE Alu 215 286 -24 2197 105 20 3 chr2 252669979 252670283 -586300 - AluSx SINE Alu -3 309 1 288 77 0 0 chr2 252670349 252670388 -586195 + (CTCA)n Simple_repeat Simple_repeat 2 40 0 1638 160 67 0 chr2 252670389 252670657 -585926 - AluJb SINE Alu -26 286 1 484 188 14 0 chr2 252671174 252671312 -585271 + (CA)n Simple_repeat Simple_repeat 1 140 0 180 362 11 11 chr2 252672699 252672793 -583790 + L2 LINE L2 3195 3288 -25 2132 108 14 3 chr2 252673346 252673641 -582942 - AluSq SINE Alu -15 298 1 1892 172 0 3 chr2 252674270 252674555 -582028 - AluJb SINE Alu -26 286 3 255 211 0 0 chr2 252674775 252674827 -581756 - L1MC4 LINE L1 -1 8041 7990 352 200 106 0 chr2 252674832 252674917 -581666 - L1MC4 LINE L1 -140 7902 7809 1340 148 14 5 chr2 252674917 252675126 -581457 + THE1B LTR MaLR 1 211 -153 247 121 0 0 chr2 252675128 252675161 -581422 + THE1B LTR MaLR 323 355 0 349 185 206 0 chr2 252675237 252675329 -581254 - L1MC4 LINE L1 -307 7735 7625 2107 125 7 0 chr2 252676572 252676876 -579707 + AluSq SINE Alu 1 306 -7 242 266 160 0 chr2 252677068 252677162 -579421 + L1MC/D LINE L1 5482 5590 -531 408 295 33 8 chr2 252677168 252677290 -579293 - L2 LINE L2 0 3272 3148 387 267 120 5 chr2 252677301 252677492 -579091 + L1MC/D LINE L1 5574 5786 -2022 1997 149 3 0 chr2 252677733 252678034 -578549 - AluJb SINE Alu -10 302 1 500 0 17 0 chr2 252678223 252678283 -578300 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 239 214 90 34 chr2 252678387 252678476 -578107 + MIR3 SINE MIR 111 204 -4 1172 119 12 0 chr2 252678740 252678908 -577675 - AluSq SINE Alu -10 303 134 2417 85 0 10 chr2 252678908 252679214 -577369 - AluY SINE Alu -8 303 1 880 220 0 0 chr2 252679912 252680080 -576503 + FRAM SINE Alu 2 169 -7 2352 60 0 3 chr2 252680194 252680502 -576081 + AluY SINE Alu 1 307 0 1569 159 0 59 chr2 252680538 252680828 -575755 + AluJb SINE Alu 1 273 -39 231 204 0 0 chr2 252680880 252680934 -575649 + (TA)n Simple_repeat Simple_repeat 1 54 0 2338 77 10 26 chr2 252680970 252681280 -575303 - AluY SINE Alu -6 305 1 2157 120 3 0 chr2 252681357 252681649 -574934 - AluSx SINE Alu -19 293 1 673 161 0 18 chr2 252681946 252682058 -574525 + AluJb SINE Alu 178 287 -25 1711 161 21 11 chr2 252683792 252684078 -572505 + AluJo SINE Alu 3 291 -21 1679 167 0 65 chr2 252684270 252684420 -572163 + AluJb SINE Alu 1 120 -192 405 0 0 0 chr2 252684420 252684465 -572118 + (TA)n Simple_repeat Simple_repeat 1 45 0 1679 167 0 65 chr2 252684465 252684637 -571946 + AluJb SINE Alu 120 302 -10 521 275 223 15 chr2 252684886 252685212 -571371 + L1MC4a LINE L1 5354 5779 -2029 2268 93 3 23 chr2 252685212 252685514 -571069 + AluSx SINE Alu 1 296 -16 521 275 223 15 chr2 252685514 252685587 -570996 + L1MC4a LINE L1 5779 5836 -1972 544 192 117 0 chr2 252685649 252685769 -570814 + AluJo SINE Alu 3 136 -176 2471 228 85 39 chr2 252687382 252687692 -568891 + L1ME3 LINE L1 4892 5186 -1147 1944 148 3 16 chr2 252687692 252687995 -568588 + AluSx SINE Alu 1 299 -13 2471 228 85 39 chr2 252687995 252688433 -568150 + L1ME3 LINE L1 5186 5602 -731 2395 97 3 0 chr2 252688433 252688732 -567851 + AluSx SINE Alu 1 300 -12 2471 228 85 39 chr2 252688732 252689162 -567421 + L1ME3 LINE L1 5602 6331 -2 2549 59 7 7 chr2 252689171 252689478 -567105 + AluY SINE Alu 1 307 -4 209 380 93 5 chr2 252689479 252689684 -566899 - L3 LINE CR1 -22 1555 1333 288 289 24 0 chr2 252689698 252689781 -566802 - L3 LINE CR1 -429 1148 1064 7727 33 2 0 chr2 252689956 252691266 -565317 - L1PA3 LINE L1 -2 6153 4843 21 36 0 0 chr2 252691278 252691306 -565277 + AT_rich Low_complexity Low_complexity 1 28 0 205 26 26 51 chr2 252691482 252691521 -565062 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 2525 67 0 0 chr2 252692767 252693065 -563518 - AluY SINE Alu -13 298 1 2213 131 0 0 chr2 252693982 252694288 -562295 + AluSx SINE Alu 1 306 -6 2030 156 0 10 chr2 252694341 252694642 -561941 - AluSx SINE Alu -12 300 3 485 269 94 12 chr2 252694898 252695058 -561525 + LTR41 LTR ERVL 6 178 -595 638 173 19 43 chr2 252695282 252695444 -561139 + LTR41 LTR ERVL 605 762 -11 24 20 0 60 chr2 252696586 252696636 -559947 + AT_rich Low_complexity Low_complexity 1 47 0 1176 177 58 151 chr2 252697741 252697996 -558587 - MLT1A2 LTR MaLR 0 374 169 1960 140 7 0 chr2 252697996 252698303 -558280 - AluSx SINE Alu 0 309 1 1176 177 58 151 chr2 252698303 252698458 -558125 - MLT1A2 LTR MaLR -205 169 1 1298 152 30 0 chr2 252698467 252698664 -557919 - AluJo SINE Alu -23 289 87 3572 200 108 43 chr2 252698665 252699487 -557096 - L1M4 LINE L1 -863 5283 4375 2543 63 7 0 chr2 252699487 252699790 -556793 - AluY SINE Alu -6 305 1 3572 200 108 43 chr2 252699790 252700031 -556552 - L1M4 LINE L1 -1771 4375 4151 570 185 7 82 chr2 252700820 252700904 -555679 + LTR45 LTR ERV1 390 460 -65 1078 190 64 85 chr2 252700904 252701199 -555384 + AluJo SINE Alu 2 290 -12 570 185 7 82 chr2 252701199 252701260 -555323 + LTR45 LTR ERV1 460 524 -1 2011 148 7 0 chr2 252701561 252701858 -554725 - AluJb SINE Alu -9 303 5 32 26 0 0 chr2 252701897 252701936 -554647 + AT_rich Low_complexity Low_complexity 1 39 0 312 281 214 0 chr2 252703416 252703697 -552886 + L2 LINE L2 2306 2646 -668 257 295 45 0 chr2 252703780 252703892 -552691 + L2 LINE L2 2858 2974 -339 680 294 17 25 chr2 252704478 252704713 -551870 + L1ME4a LINE L1 5452 5684 -437 1911 145 41 0 chr2 252704719 252705009 -551574 + AluJb SINE Alu 1 302 -10 326 236 220 21 chr2 252705033 252705224 -551359 + L1ME4a LINE L1 5793 6021 -100 186 118 0 0 chr2 252706581 252706615 -549968 + (TATAA)n Simple_repeat Simple_repeat 5 38 0 1248 164 38 0 chr2 252706620 252706833 -549750 + MER46A DNA MER2_type 16 236 0 1758 178 10 3 chr2 252708592 252708885 -547698 + AluJb SINE Alu 1 295 -17 2134 123 0 40 chr2 252708887 252709212 -547371 + AluSx SINE Alu 1 312 0 1312 162 5 0 chr2 252709221 252709437 -547146 + L1M4 LINE L1 5429 5645 -539 557 99 0 0 chr2 252709573 252709654 -546929 - MER2 DNA MER2_type -138 207 127 2748 35 0 6 chr2 252709659 252709972 -546611 + AluYb8 SINE Alu 1 311 -7 253 284 172 17 chr2 252710324 252710440 -546143 - L2 LINE L2 -1 3271 3138 534 283 45 50 chr2 252710891 252711237 -545346 + MLT1H LTR MaLR 4 384 -165 251 164 55 0 chr2 252711242 252711297 -545286 + MLT1H LTR MaLR 492 549 0 818 161 0 0 chr2 252711414 252711538 -545045 + FLAM_A SINE Alu 5 128 -5 2290 84 0 17 chr2 252712051 252712349 -544234 + AluY SINE Alu 1 293 -18 2000 146 3 3 chr2 252712991 252713293 -543290 + AluJb SINE Alu 1 302 -10 238 306 0 31 chr2 252713562 252713660 -542923 - MIR SINE MIR -75 187 93 283 200 46 0 chr2 252714298 252714363 -542220 + L1MC4 LINE L1 7973 8040 -2 25 31 0 0 chr2 252715439 252715471 -541112 + AT_rich Low_complexity Low_complexity 1 32 0 23 54 0 0 chr2 252715499 252715536 -541047 + AT_rich Low_complexity Low_complexity 1 37 0 1889 135 7 3 chr2 252715812 252716094 -540489 - AluSx SINE Alu -24 288 6 1081 142 71 110 chr2 252716746 252717028 -539555 - L1MA8 LINE L1 -1 6290 6020 * 1687 161 99 0 chr2 252717021 252717343 -539240 - L1MA4 LINE L1 -53 6247 5894 258 208 153 82 chr2 252717848 252718031 -538552 + L1ME3A LINE L1 5975 6170 0 757 188 0 23 chr2 252718531 252718664 -537919 + FLAM_A SINE Alu 1 130 -3 265 0 0 29 chr2 252718728 252718762 -537821 + AluSg/x SINE Alu 154 186 -114 1076 159 44 0 chr2 252719239 252719421 -537162 + L1MC1 LINE L1 6144 6333 0 186 346 39 13 chr2 252719428 252719506 -537077 - MIR SINE MIR -163 99 20 352 335 119 16 chr2 252720370 252720555 -536028 + MIR3 SINE MIR 3 206 -2 225 109 43 0 chr2 252721143 252721189 -535394 + L1MC4 LINE L1 6656 6703 -1339 559 202 0 0 chr2 252721196 252721295 -535288 - FLAM_C SINE Alu -10 133 35 242 229 83 10 chr2 252721297 252721393 -535190 + L1MC4a LINE L1 5954 6056 -1752 800 248 110 44 chr2 252721768 252722151 -534432 + L1MC5 LINE L1 7531 7938 -23 276 305 99 8 chr2 252722232 252722363 -534220 - MIR3 SINE MIR -36 172 30 424 151 27 0 chr2 252722402 252722475 -534108 + U3 snRNA snRNA 1 75 -142 396 148 136 3 chr2 252722600 252722746 -533837 - L1MDb LINE L1 -5179 1230 1065 1920 225 106 29 chr2 252722754 252723331 -533252 - MLT1E2 LTR MaLR -4 622 1 664 244 46 74 chr2 252723334 252723617 -532966 - L1MDb LINE L1 -5349 1060 786 315 248 32 40 chr2 252724388 252724513 -532070 + L1ME4a LINE L1 5991 6114 -7 33 0 0 23 chr2 252724670 252724695 -531888 + AT_rich Low_complexity Low_complexity 1 26 -17 2287 88 3 0 chr2 252724695 252724980 -531603 - AluY SINE Alu -25 286 1 33 0 0 23 chr2 252724980 252724998 -531585 + AT_rich Low_complexity Low_complexity 26 43 0 2328 112 0 6 chr2 252725105 252725418 -531165 + AluSx SINE Alu 1 311 -1 3020 228 99 80 chr2 252725605 252726611 -529972 + MER69B DNA AcHobo 4 1038 -1488 1845 107 0 8 chr2 252726611 252726863 -529720 - AluY SINE Alu -13 298 49 3020 228 99 80 chr2 252726863 252727056 -529527 + MER69B DNA AcHobo 1038 1226 0 300 230 143 51 chr2 252727072 252727289 -529294 - L2 LINE L2 0 3313 3077 241 284 229 0 chr2 252727401 252727510 -529073 - MIR SINE MIR -50 212 79 259 163 0 0 chr2 252729028 252729071 -527512 - MIR SINE MIR 0 262 220 192 268 0 0 chr2 252729038 252729079 -527504 - L2 LINE L2 -16 3256 3216 * 2102 120 27 0 chr2 252729086 252729387 -527196 - AluSx SINE Alu -3 309 1 215 286 0 0 chr2 252729665 252729728 -526855 + MIR SINE MIR 84 146 -62 180 0 0 0 chr2 252729817 252729837 -526746 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 23 78 0 0 chr2 252731017 252731068 -525515 + GC_rich Low_complexity Low_complexity 1 51 0 333 177 23 76 chr2 252731323 252731856 -524727 + (GGCTG)n Simple_repeat Simple_repeat 1 505 0 21 57 0 0 chr2 252736849 252736884 -519699 + AT_rich Low_complexity Low_complexity 1 35 0 2375 77 0 0 chr2 252737474 252737761 -518822 - AluSg SINE Alu -23 287 1 225 94 0 0 chr2 252737886 252737918 -518665 + (TA)n Simple_repeat Simple_repeat 2 33 0 1661 163 0 39 chr2 252737918 252738224 -518359 - AluJo SINE Alu -18 294 1 2367 77 3 10 chr2 252738771 252739069 -517514 + AluSq SINE Alu 1 296 -17 207 0 0 0 chr2 252739069 252739092 -517491 + (CCAA)n Simple_repeat Simple_repeat 1 23 0 1894 151 24 3 chr2 252739271 252739563 -517020 - AluSx SINE Alu -14 298 1 9591 147 17 0 chr2 252941155 252942697 -313886 - L1M1 LINE L1 -4857 2708 1141 1563 320 106 17 chr2 252942894 252944331 -312252 - L1MC4a LINE L1 -748 5398 4673 242 321 213 17 chr2 252944517 252944813 -311770 + L2 LINE L2 2912 3265 -48 809 178 9 0 chr2 252944833 252945050 -311533 + (TGGA)n Simple_repeat Simple_repeat 1 219 0 2695 183 26 24 chr2 252945150 252946139 -310444 - L1MB8 LINE L1 -286 5892 4902 388 259 176 55 chr2 252946170 252946533 -310050 - L1ME4a LINE L1 0 6121 5715 233 100 40 20 chr2 252946601 252946651 -309932 - MLT2A1 LTR ERVL 0 444 394 200 111 28 0 chr2 252946656 252946692 -309891 + (TA)n Simple_repeat Simple_repeat 2 38 0 335 198 66 55 chr2 252946695 252946786 -309797 - L1MC4 LINE L1 -1339 6703 6612 313 141 59 0 chr2 252946786 252946871 -309712 + (TA)n Simple_repeat Simple_repeat 1 90 0 2598 94 41 13 chr2 252946879 252947272 -309311 - MLT2A1 LTR ERVL -40 404 1 23 0 0 0 chr2 252947284 252947307 -309276 + AT_rich Low_complexity Low_complexity 1 23 0 278 258 65 58 chr2 252947309 252947464 -309119 - L1ME4a LINE L1 -2 6119 5964 2091 117 7 3 chr2 252947482 252947790 -308793 - AluSx SINE Alu -3 309 1 1363 136 95 8 chr2 252947933 252948176 -308407 + MSTA LTR MaLR 150 413 -15 327 175 0 0 chr2 252948173 252948230 -308353 + MSTA LTR MaLR 357 413 -15 * 449 167 0 0 chr2 252948227 252948299 -308284 + MSTA LTR MaLR 357 428 0 * 1131 195 52 12 chr2 252948299 252948547 -308036 + MLT1C LTR MaLR 88 345 -122 1456 223 92 66 chr2 252948774 252948831 -307752 - MLT1F1 LTR MaLR 0 567 513 1784 171 0 0 chr2 252948831 252949123 -307460 - AluJb SINE Alu -20 292 1 1456 223 92 66 chr2 252949123 252949612 -306971 - MLT1F1 LTR MaLR -54 513 7 22 0 0 0 chr2 252951147 252951169 -305414 + AT_rich Low_complexity Low_complexity 1 22 0 6890 252 48 13 chr2 252951170 252952252 -304331 + L1M4 LINE L1 2563 3607 -2539 1686 184 0 7 chr2 252952252 252952556 -304027 + AluJb SINE Alu 10 311 -1 6890 252 48 13 chr2 252952556 252953719 -302864 + L1M4 LINE L1 3607 4885 -1261 456 271 31 0 chr2 252953857 252953986 -302597 + L1MA10 LINE L1 6173 6305 -29 798 282 70 64 chr2 252954009 252954390 -302193 + L2 LINE L2 2810 3196 -117 366 80 0 0 chr2 252954390 252954440 -302143 + (CA)n Simple_repeat Simple_repeat 2 51 0 798 282 70 64 chr2 252954440 252954558 -302025 + L2 LINE L2 3196 3312 -1 703 228 35 12 chr2 252955277 252955448 -301135 - MLT1D LTR MaLR -301 204 30 1579 151 65 73 chr2 252955563 252955933 -300650 + MLT1B LTR MaLR 8 374 -16 255 318 55 0 chr2 252956473 252956583 -300000 - L2 LINE L2 -32 3240 3125 1104 188 10 0 chr2 252957115 252957312 -299271 - LTR31 LTR ERV1 -376 243 45 219 36 0 0 chr2 252957313 252957341 -299242 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 2014 127 6 13 chr2 252957364 252957678 -298905 + AluSx SINE Alu 1 312 0 685 241 43 0 chr2 252959795 252959957 -296626 + L1MB3 LINE L1 5628 5796 -387 1631 195 30 52 chr2 252959958 252960363 -296220 - MSTB1 LTR MaLR 0 432 37 227 180 0 0 chr2 252960409 252960459 -296124 - MSTB2 LTR MaLR -364 93 44 * 494 135 45 0 chr2 252960457 252960546 -296037 - MSTB2 LTR MaLR -364 93 1 1592 159 86 38 chr2 252960546 252960867 -295716 + L1MB3 LINE L1 5793 6136 -47 1870 85 63 0 chr2 252960867 252961138 -295445 + AluSc SINE Alu 1 288 -21 1592 159 86 38 chr2 252961138 252961187 -295396 + L1MB3 LINE L1 6136 6181 -2 450 346 78 22 chr2 252961184 252961644 -294939 + L1ME3A LINE L1 5414 5914 -256 * 2136 99 0 0 chr2 252961647 252961929 -294654 - AluSg SINE Alu -13 297 16 2264 156 70 7 chr2 252962520 252962923 -293660 - MSTA LTR MaLR 0 428 1 1839 98 6 22 chr2 252964315 252964843 -291740 - MER4A LTR ERV1 -19 645 1 378 321 144 53 chr2 252965326 252965909 -290674 - L1M4 LINE L1 -749 5397 4762 1076 210 84 56 chr2 252966347 252966669 -289914 + MLT1A1 LTR MaLR 16 365 0 191 230 153 59 chr2 252968036 252968330 -288253 + L2 LINE L2 2351 2757 -557 2426 107 81 8 chr2 252968558 252968952 -287631 + MSTA LTR MaLR 1 423 -5 299 232 155 7 chr2 252970561 252970703 -285880 - MIR SINE MIR -48 214 52 455 241 75 0 chr2 252970731 252970864 -285719 - MLT1E1 LTR MaLR 0 654 512 2058 215 41 10 chr2 252970973 252971465 -285118 + L1MB3 LINE L1 5628 6134 -49 330 232 11 42 chr2 252973699 252973794 -282789 + GA-rich Low_complexity Low_complexity 1 92 0 285 200 0 0 chr2 252974271 252974326 -282257 + L2 LINE L2 3198 3252 -61 346 289 187 22 chr2 252977165 252977438 -279145 + HAL1 LINE L1 1991 2308 -199 503 172 30 0 chr2 252977905 252978004 -278579 - MLT1C LTR MaLR 0 542 441 412 239 43 43 chr2 252978084 252978222 -278361 - MLT1F1 LTR MaLR -428 139 2 445 261 176 0 chr2 252979258 252979411 -277172 - MER20 DNA MER1_type 0 219 40 232 265 0 85 chr2 252979583 252979772 -276811 + (TGG)n Simple_repeat Simple_repeat 2 174 0 215 242 0 91 chr2 252979833 252980031 -276552 + (TGG)n Simple_repeat Simple_repeat 1 180 0 * 293 149 119 71 chr2 252980003 252980171 -276412 + (ATGGTG)n Simple_repeat Simple_repeat 3 178 0 270 228 0 96 chr2 252980114 252980311 -276272 + (TGG)n Simple_repeat Simple_repeat 3 180 0 * 201 189 126 31 chr2 252980284 252980411 -276172 + (ATGGTG)n Simple_repeat Simple_repeat 3 141 0 * 320 155 162 14 chr2 252980423 252980571 -276012 + (ATGGTG)n Simple_repeat Simple_repeat 3 172 0 313 168 108 60 chr2 252980613 252980780 -275803 + (ATGGTG)n Simple_repeat Simple_repeat 4 178 0 1177 216 81 33 chr2 252981567 252981901 -274682 - MLT1C LTR MaLR -65 402 53 265 157 113 43 chr2 252982475 252982621 -273962 + L1M4 LINE L1 5189 5358 -788 526 294 55 38 chr2 252982686 252983030 -273553 + LTR16A1 LTR ERVL 1 350 -107 234 324 69 0 chr2 252984717 252984862 -271721 + MER45A DNA AcHobo 2 156 -22 585 237 93 52 chr2 252985727 252986041 -270542 - MLT1C LTR MaLR -154 351 3 195 288 0 15 chr2 252986052 252986118 -270465 + MIR SINE MIR 81 145 -63 226 310 35 11 chr2 252987212 252987299 -269284 + MER69 DNA AcHobo 4 92 -2434 282 262 58 29 chr2 252988148 252988251 -268332 - MIR SINE MIR -81 127 22 543 264 264 9 chr2 252988741 252989082 -267501 + MLT1K LTR MaLR 4 431 -157 228 234 31 0 chr2 252989982 252990046 -266537 + (CTGGGG)n Simple_repeat Simple_repeat 3 68 0 348 293 0 19 chr2 252990236 252990342 -266241 + MER5B DNA MER1_type 75 178 0 1525 295 66 59 chr2 252991735 252992737 -263846 - L1ME3A LINE L1 -8 6162 5155 257 315 27 9 chr2 252993080 252993191 -263392 + MIR3 SINE MIR 76 188 -20 260 339 33 0 chr2 252993258 252993379 -263204 + MIR SINE MIR 45 169 -93 339 402 22 0 chr2 252993529 252993708 -262875 - L1ME3A LINE L1 -2631 3515 3333 12785 148 58 22 chr2 252993713 252998612 -257971 - L1MA3 LINE L1 -5 7719 2643 2968 157 88 7 chr2 252998712 252999268 -257315 - L1MA3 LINE L1 -6951 614 14 217 118 0 0 chr2 252999381 252999415 -257168 + (TC)n Simple_repeat Simple_repeat 1 34 0 252 86 0 0 chr2 252999415 252999450 -257133 + (TTCC)n Simple_repeat Simple_repeat 1 35 0 291 179 0 0 chr2 252999450 252999519 -257064 - Alu SINE Alu 0 302 251 387 303 24 50 chr2 252999692 252999825 -256758 - L1ME3A LINE L1 -3095 3051 2916 1990 122 49 83 chr2 252999825 253000211 -256372 - THE1C LTR MaLR 0 375 3 387 303 24 50 chr2 253000211 253000417 -256166 - L1ME3A LINE L1 -3230 2916 2721 222 342 88 26 chr2 253000743 253000857 -255726 + MIR SINE MIR 121 241 -21 306 364 77 43 chr2 253001622 253001946 -254637 - HAL1b LINE L1 -680 668 334 211 389 19 6 chr2 253003235 253003392 -253191 + MIR SINE MIR 6 164 -98 1054 289 83 34 chr2 253005343 253005811 -250772 + MLT1F1 LTR MaLR 68 558 -9 237 287 32 32 chr2 253007874 253007968 -248615 + L1P LINE L1 4879 4972 -1174 2580 109 28 8 chr2 253008792 253009149 -247434 + THE1B LTR MaLR 1 364 0 343 293 126 53 chr2 253009490 253010077 -246506 - L1ME4a LINE L1 -6 6115 5486 637 215 22 0 chr2 253011853 253011988 -244595 + Charlie4 DNA MER1_type 1824 1961 0 386 345 17 6 chr2 253013169 253013346 -243237 + MIR SINE MIR 63 241 -21 217 263 11 84 chr2 253013967 253014157 -242426 + G-rich Low_complexity Low_complexity 1 176 0 328 293 30 6 chr2 253014184 253014351 -242232 + G-rich Low_complexity Low_complexity 6 176 0 187 267 35 69 chr2 253015766 253015882 -240701 + L2 LINE L2 3158 3269 -3 2332 91 0 0 chr2 253016274 253016581 -240002 - AluY SINE Alu -4 307 1 747 285 64 36 chr2 253017898 253018170 -238413 - L1MEd LINE L1 -1094 1396 1016 2304 132 66 0 chr2 253018170 253018534 -238049 - MLT1B LTR MaLR 0 390 3 747 285 64 36 chr2 253018534 253018674 -237909 - L1MEd LINE L1 -1474 1016 881 1613 170 30 7 chr2 253018675 253018946 -237637 + AluJb SINE Alu 2 278 -34 387 0 0 0 chr2 253018946 253018989 -237594 + (CA)n Simple_repeat Simple_repeat 2 44 0 333 266 71 104 chr2 253019348 253019546 -237037 + L1MC4a LINE L1 5612 5794 -2014 279 0 0 0 chr2 253019546 253019577 -237006 + (TG)n Simple_repeat Simple_repeat 1 31 0 333 266 71 104 chr2 253019577 253019732 -236851 + L1MC4a LINE L1 5794 5953 -1855 226 222 111 37 chr2 253020311 253020419 -236164 - L2 LINE L2 -206 3066 2951 191 347 42 11 chr2 253020455 253020550 -236033 - L2 LINE L2 -16 3256 3159 272 211 14 0 chr2 253022543 253022614 -233969 + GA-rich Low_complexity Low_complexity 1 72 0 546 316 102 24 chr2 253023254 253023628 -232955 + L1MC4a LINE L1 2335 2737 -3409 343 264 149 17 chr2 253023882 253024117 -232466 + L1MC4a LINE L1 3634 3899 -2247 306 303 28 31 chr2 253024105 253024239 -232344 + L1MC4a LINE L1 5691 5733 -430 * 2708 10 0 3 chr2 253024239 253024547 -232036 + AluY SINE Alu 1 307 -4 306 303 28 31 chr2 253024547 253024638 -231945 + L1MC4a LINE L1 5733 5823 -340 1740 155 38 31 chr2 253029537 253029854 -226729 + THE1B LTR MaLR 46 364 0 478 229 121 19 chr2 253030884 253031041 -225542 + MLT1E LTR MaLR 58 230 -363 888 229 53 0 chr2 253031050 253031294 -225289 + MLT1E LTR MaLR 333 589 -4 2093 128 3 12 chr2 253033952 253034288 -222295 + MER1B DNA MER1_type 1 333 -4 1748 125 52 78 chr2 253036478 253036862 -219721 - THE1C LTR MaLR -1 374 1 336 244 0 0 chr2 253038157 253038247 -218336 + (TG)n Simple_repeat Simple_repeat 1 90 0 262 158 0 35 chr2 253038247 253038304 -218279 + MER4-int LTR ERV1 1112 1166 -5432 738 252 0 0 chr2 253038304 253038660 -217923 + (TG)n Simple_repeat Simple_repeat 1 356 0 249 210 0 0 chr2 253038722 253038784 -217799 + (TG)n Simple_repeat Simple_repeat 1 62 0 256 289 24 0 chr2 253038801 253038884 -217699 + (TATG)n Simple_repeat Simple_repeat 3 87 0 200 225 0 96 chr2 253042266 253042444 -214139 + (CTA)n Simple_repeat Simple_repeat 2 162 0 274 294 248 11 chr2 253044709 253044991 -211592 - L2 LINE L2 0 3272 2924 470 210 43 58 chr2 253045160 253045298 -211285 + HAL1 LINE L1 5 140 -2367 702 302 94 3 chr2 253045366 253045664 -210919 + HAL1 LINE L1 1283 1607 -900 616 200 15 5 chr2 253045942 253046141 -210442 + L1M4 LINE L1 2838 3083 -3063 490 218 164 0 chr2 253046142 253046252 -210331 + FRAM SINE Alu 1 128 -48 393 170 50 0 chr2 253046268 253046368 -210215 + GA-rich Low_complexity Low_complexity 3 107 0 1143 278 77 33 chr2 253046368 253046907 -209676 + L1M4 LINE L1 3073 3649 -2497 315 0 0 0 chr2 253046907 253046942 -209641 + (CCCTAA)n Simple_repeat Simple_repeat 3 37 0 1143 278 77 33 chr2 253046942 253047075 -209508 + L1M4 LINE L1 3649 3775 -2371 220 175 35 0 chr2 253047075 253047132 -209451 + (TA)n Simple_repeat Simple_repeat 2 60 0 1499 256 44 44 chr2 253047132 253047911 -208672 + L1M4 LINE L1 3696 4474 -1672 1316 254 177 29 chr2 253048124 253048622 -207961 + HAL1 LINE L1 1632 2055 -452 270 116 0 0 chr2 253048622 253048665 -207918 + (TG)n Simple_repeat Simple_repeat 1 43 0 222 37 0 0 chr2 253048664 253048691 -207892 + (GA)n Simple_repeat Simple_repeat 1 27 0 * 1316 254 177 29 chr2 253048665 253048955 -207628 + HAL1 LINE L1 2055 2507 0 202 223 43 43 chr2 253049026 253049120 -207463 - L2 LINE L2 -661 2653 2560 690 208 60 108 chr2 253049254 253049523 -207060 + MLT1A1 LTR MaLR 1 256 -109 248 189 34 91 chr2 253051050 253051225 -205358 + (TGGG)n Simple_repeat Simple_repeat 2 166 0 * 291 288 24 29 chr2 253051126 253051296 -205287 + G-rich Low_complexity Low_complexity 4 172 0 1457 249 72 5 chr2 253053559 253053976 -202607 + LTR56 LTR ERV1 1 445 0 1233 299 67 35 chr2 253056787 253057719 -198864 + L1ME2 LINE L1 656 1616 -4780 3129 244 101 13 chr2 253057734 253058849 -197734 + L1ME2 LINE L1 3470 4683 -1532 1721 303 66 12 chr2 253058858 253059445 -197138 + L1PA16 LINE L1 1 619 -6168 4877 251 30 17 chr2 253059933 253061426 -195157 + L1PA16 LINE L1 1343 2937 -3860 2152 119 41 0 chr2 253061426 253061721 -194862 + AluY SINE Alu 1 307 -4 4877 251 30 17 chr2 253061721 253062368 -194215 + L1PA16 LINE L1 2937 3574 -3223 5299 179 20 11 chr2 253062376 253064233 -192350 + L1PA16 LINE L1 4941 6814 -3 1158 274 40 14 chr2 253064231 253064462 -192121 + L1ME2 LINE L1 4669 4892 -1323 * 459 167 22 0 chr2 253064462 253064552 -192031 - L1MB5 LINE L1 -6 6168 6077 1158 274 40 14 chr2 253064552 253064766 -191817 + L1ME2 LINE L1 4892 5126 -1089 1824 211 56 15 chr2 253064998 253065462 -191121 + L1ME2 LINE L1 5469 5951 -282 2015 148 119 8 chr2 253065476 253065861 -190722 - MSTA LTR MaLR 0 428 1 9412 136 6 33 chr2 253065861 253067483 -189100 - MSTA-int LTR MaLR 0 1580 3 1610 174 171 8 chr2 253067485 253067853 -188730 - MSTA LTR MaLR 0 428 1 2759 179 2 2 chr2 253067854 253068330 -188253 - MER66B LTR ERV1 -10 476 1 755 253 18 48 chr2 253068330 253068603 -187980 + L1ME2 LINE L1 5948 6212 -21 198 250 0 0 chr2 253071824 253071880 -184703 + (TG)n Simple_repeat Simple_repeat 1 56 0 501 266 68 6 chr2 253072528 253072705 -183878 + MER20 DNA MER1_type 32 219 0 640 215 147 41 chr2 253072731 253073135 -183448 - LTR54B LTR ERV1 -2 496 22 24 32 0 0 chr2 253073378 253073409 -183174 + AT_rich Low_complexity Low_complexity 1 31 0 1869 154 18 84 chr2 253074570 253074677 -181906 + MLT2D LTR ERVL 3 115 -299 2176 116 0 0 chr2 253074677 253074971 -181612 + AluSg SINE Alu 3 296 -14 1869 154 18 84 chr2 253074971 253075304 -181279 + MLT2D LTR ERVL 115 414 0 946 231 129 72 chr2 253075320 253075823 -180760 + MLT1F LTR MaLR 11 542 0 1326 288 95 59 chr2 253075873 253077051 -179532 - HAL1 LINE L1 -291 2216 996 234 278 56 0 chr2 253077219 253077291 -179292 - MIR SINE MIR -107 155 80 543 143 0 0 chr2 253077800 253077891 -178692 - MIR SINE MIR -113 149 59 542 138 25 31 chr2 253080884 253081043 -175540 + (CA)n Simple_repeat Simple_repeat 1 158 0 416 220 21 23 chr2 253081064 253081409 -175174 + (CA)n Simple_repeat Simple_repeat 1 344 0 568 189 28 44 chr2 253082235 253082415 -174168 + MER53 DNA DNA 1 177 -12 603 274 80 5 chr2 253084010 253084222 -172361 + MSTD LTR MaLR 142 369 -27 400 285 102 7 chr2 253084667 253084804 -171779 + MER5B DNA MER1_type 29 178 0 482 190 78 42 chr2 253084813 253084955 -171628 + MER5A DNA MER1_type 17 163 -26 215 253 59 106 chr2 253084830 253085000 -171583 - MER5A DNA MER1_type -27 162 1 * 361 261 275 0 chr2 253085014 253085156 -171427 + MER5A DNA MER1_type 9 189 0 249 262 123 16 chr2 253085817 253085939 -170644 + MLT2E LTR ERVL 188 322 -306 510 270 115 0 chr2 253086445 253086671 -169912 + MER68 LTR ERV1 131 382 -180 254 139 38 165 chr2 253086666 253086745 -169838 + MER68 LTR ERV1 494 562 0 * 592 324 10 5 chr2 253086747 253086954 -169629 + ERVL LTR ERVL 428 635 -5129 441 263 51 46 chr2 253089565 253089740 -166843 - MIR SINE MIR -54 208 33 203 291 25 13 chr2 253090009 253090088 -166495 + L3 LINE CR1 1399 1478 -99 1637 202 119 5 chr2 253090409 253090844 -165739 - MER31A LTR ERV1 0 485 1 326 278 11 22 chr2 253090867 253090957 -165626 + CT-rich Low_complexity Low_complexity 5 93 0 1960 267 52 16 chr2 253091007 253091148 -165435 - L1MB3 LINE L1 -29 6154 6014 436 343 94 29 chr2 253091148 253091767 -164816 - L1ME2 LINE L1 -166 5998 5340 1353 251 166 8 chr2 253092448 253092931 -163652 - MER90 LTR ERV1 -16 559 1 236 222 24 119 chr2 253095467 253095593 -160990 - L2 LINE L2 -233 3039 2926 1638 169 14 10 chr2 253098936 253099226 -157357 + AluJo SINE Alu 1 291 -21 883 180 16 38 chr2 253100725 253100908 -155675 - MLT1A1 LTR MaLR -186 179 1 312 369 22 52 chr2 253101583 253101851 -154732 + L1MC/D LINE L1 5296 5555 -2253 952 212 80 0 chr2 253101993 253102205 -154378 - MER7A DNA MER2_type -1 335 107 1568 213 181 4 chr2 253102205 253102670 -153913 + LTR64 LTR ERVK 1 547 -11 524 252 0 8 chr2 253102678 253102801 -153782 - MER7A DNA MER2_type -226 120 1 320 341 57 0 chr2 253102863 253102986 -153597 + L1 LINE L1 2519 2648 -3498 4343 60 2 3 chr2 253104546 253105147 -151436 - L1PA5 LINE L1 -796 5350 4751 6762 47 7 1 chr2 253105147 253105957 -150626 + L1PA5 LINE L1 5328 6143 -11 186 43 0 0 chr2 253105960 253105983 -150600 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 357 263 55 9 chr2 253106601 253106723 -149860 + MIR SINE MIR 41 166 -62 872 248 41 124 chr2 253106724 253107303 -149280 + L1ME LINE L1 5152 5678 -492 363 23 0 0 chr2 253107303 253107347 -149236 + (CA)n Simple_repeat Simple_repeat 1 44 0 872 248 41 124 chr2 253107347 253107403 -149180 + L1ME LINE L1 5678 5737 -433 2027 238 56 21 chr2 253107404 253108450 -148133 + L1ME2 LINE L1 4805 5894 -270 1494 256 40 15 chr2 253108448 253108851 -147732 + MLT1B-int LTR MaLR 1320 1732 -3 * 1661 161 114 44 chr2 253108854 253108976 -147607 + MLT1B LTR MaLR 1 113 -277 2158 107 3 3 chr2 253108976 253109284 -147299 + AluSq SINE Alu 5 312 -1 1661 161 114 44 chr2 253109284 253109522 -147061 + MLT1B LTR MaLR 113 386 -4 1411 230 74 26 chr2 253109538 253110057 -146526 - L1ME LINE L1 -425 6135 5596 552 259 10 86 chr2 253110064 253110261 -146322 + MLT1E LTR MaLR 5 186 -356 821 248 12 127 chr2 253110262 253110665 -145918 + MLT1F1-int LTR MaLR 991 1347 -24 527 250 220 13 chr2 253110672 253110750 -145833 + MLT1F1 LTR MaLR 105 166 -401 186 43 0 0 chr2 253110750 253110773 -145810 + (TC)n Simple_repeat Simple_repeat 2 24 0 527 250 220 13 chr2 253110773 253111064 -145519 + MLT1F1 LTR MaLR 166 565 -2 1253 240 45 11 chr2 253111067 253111512 -145071 - L1ME LINE L1 -1468 5072 4613 419 276 80 30 chr2 253111524 253111723 -144860 + L1ME LINE L1 5579 5787 -375 4017 269 55 17 chr2 253111824 253112733 -143850 + L1MEc LINE L1 2112 2985 -3230 1368 210 18 85 chr2 253112733 253113133 -143450 + MLT1A2 LTR MaLR 1 373 -1 4017 269 55 17 chr2 253113133 253114096 -142487 + L1MEc LINE L1 2985 4026 -2189 1238 281 20 32 chr2 253114213 253114615 -141968 - L1ME LINE L1 -2052 4488 4092 640 249 49 20 chr2 253114766 253114790 -141793 + L1MDa LINE L1 2272 2294 -4246 4377 51 16 2 chr2 253114790 253115340 -141243 + LTR6B LTR ERV1 1 558 0 640 249 49 20 chr2 253115340 253115560 -141023 + L1MDa LINE L1 2294 2523 -4017 208 276 69 11 chr2 253115560 253115647 -140936 + MER5A DNA MER1_type 53 144 -45 2503 43 3 0 chr2 253115926 253116231 -140352 + AluY SINE Alu 6 311 0 210 368 60 0 chr2 253116959 253117076 -139507 - L2 LINE L2 -3 3269 3146 415 293 27 14 chr2 253118207 253118354 -138229 - L1MC4a LINE L1 -1945 5863 5715 200 347 25 33 chr2 253118652 253118773 -137810 + MIR SINE MIR 87 206 -56 275 344 53 40 chr2 253121392 253121619 -134964 - L2 LINE L2 -213 3059 2830 189 107 0 0 chr2 253124438 253124466 -132117 + (TTCA)n Simple_repeat Simple_repeat 4 31 0 474 250 34 57 chr2 253124467 253124643 -131940 - L2 LINE L2 -25 3288 3117 838 215 20 20 chr2 253124656 253124851 -131732 + MLT1D LTR MaLR 3 197 -308 7404 177 9 26 chr2 253124853 253126983 -129600 + L1MA4 LINE L1 6 2102 -4065 949 250 110 17 chr2 253127632 253128105 -128478 - L1MEc LINE L1 -3589 2951 2482 1960 217 139 65 chr2 253128548 253128615 -127968 - L1MC4 LINE L1 -144 7898 7837 391 239 132 42 chr2 253128615 253128782 -127801 + MER5A DNA MER1_type 4 185 -4 1960 217 139 65 chr2 253128782 253129519 -127064 - L1MC4 LINE L1 -205 7837 7034 428 304 87 0 chr2 253129525 253129686 -126897 - L1MC4 LINE L1 -1396 6646 6472 266 307 18 0 chr2 253129828 253129942 -126641 - L1MEc LINE L1 -4620 1920 1805 2105 96 0 7 chr2 253130149 253130421 -126162 - AluSx SINE Alu -8 304 35 545 261 101 93 chr2 253130479 253131026 -125557 - L1MEc LINE L1 -4937 1593 1043 665 179 40 13 chr2 253131661 253131812 -124771 - L1MC3 LINE L1 -1 7784 7630 207 0 0 0 chr2 253131823 253131846 -124737 + (T)n Simple_repeat Simple_repeat 1 23 0 16354 175 28 13 chr2 253132346 253135827 -120756 + L1MA4 LINE L1 2187 5738 -743 1128 139 0 6 chr2 253135827 253136000 -120583 - L1 LINE L1 -1887 4259 4088 4230 151 22 13 chr2 253136000 253136738 -119845 + L1MA4 LINE L1 5721 6482 0 196 301 132 42 chr2 253136974 253137167 -119416 - L2 LINE L2 -302 3011 2802 1081 187 39 9 chr2 253138325 253138555 -118028 + L1MD3 LINE L1 7758 7994 -1 209 315 150 5 chr2 253139209 253139409 -117174 + L2 LINE L2 2236 2464 -850 21 36 0 0 chr2 253141077 253141105 -115478 + AT_rich Low_complexity Low_complexity 1 28 0 746 300 100 12 chr2 253141123 253141453 -115130 - L1ME3A LINE L1 -15 6950 6592 518 195 18 44 chr2 253141641 253141754 -114829 - MER7A DNA MER2_type -238 108 1 758 250 4 42 chr2 253141756 253141992 -114591 - L1ME3A LINE L1 -1291 5650 5424 2395 70 0 23 chr2 253142094 253142395 -114188 - AluY SINE Alu -17 294 1 416 239 239 13 chr2 253142404 253142642 -113941 - L1ME3A LINE L1 -4237 2885 2594 201 255 20 0 chr2 253142693 253142744 -113839 + MIR SINE MIR 205 256 -6 4427 60 4 15 chr2 253143158 253143705 -112878 + L1PA7 LINE L1 5613 6153 -1 33 0 0 0 chr2 253143708 253143741 -112842 + AT_rich Low_complexity Low_complexity 1 33 0 858 262 107 60 chr2 253143752 253144199 -112384 - L1MCc LINE L1 -1911 5030 4563 258 32 0 0 chr2 253144219 253144250 -112333 + (CA)n Simple_repeat Simple_repeat 2 32 0 1388 179 29 29 chr2 253144272 253144545 -112038 - AluJb SINE Alu -3 309 37 889 327 80 9 chr2 253144558 253145209 -111374 - L1MCc LINE L1 -2386 4555 3859 648 257 67 45 chr2 253145357 253145799 -110784 - L1MCc LINE L1 -4910 2021 1297 25 51 0 0 chr2 253146166 253146205 -110378 + AT_rich Low_complexity Low_complexity 1 39 0 319 307 45 16 chr2 253146269 253146487 -110096 - L1MEc LINE L1 -3856 2359 2182 497 300 131 63 chr2 253148544 253148946 -107637 + MLT1J LTR MaLR 1 439 -72 2067 87 40 4 chr2 253148946 253149223 -107360 + AluSc SINE Alu 1 287 -22 497 300 131 63 chr2 253149223 253149277 -107306 + MLT1J LTR MaLR 439 488 -23 621 263 113 24 chr2 253149336 253149583 -107000 + MLT1L LTR MaLR 339 607 -8 328 309 171 13 chr2 253149735 253150039 -106544 + L1M4 LINE L1 4951 5302 -844 913 80 0 0 chr2 253150060 253150173 -106410 + AluYb8 SINE Alu 1 113 -205 180 0 0 0 chr2 253150209 253150229 -106354 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1964 163 0 0 chr2 253150722 253151022 -105561 + AluJb SINE Alu 1 300 -12 2282 94 7 0 chr2 253151571 253151868 -104715 - AluSx SINE Alu -13 299 1 242 285 13 72 chr2 253152093 253152296 -104287 - L1MC/D LINE L1 -808 5483 5332 3930 272 67 84 chr2 253152473 253152513 -104070 + L1M4 LINE L1 14 53 -6772 2055 115 23 13 chr2 253152513 253152818 -103765 + AluSx SINE Alu 1 308 -4 3930 272 67 84 chr2 253152818 253154104 -102479 + L1M4 LINE L1 53 1359 -5466 317 93 19 0 chr2 253154104 253154158 -102425 + (TA)n Simple_repeat Simple_repeat 2 56 0 3930 272 67 84 chr2 253154158 253155254 -101329 + L1M4 LINE L1 1359 2515 -4310 1756 223 179 5 chr2 253155254 253155684 -100899 - MLT1D LTR MaLR 0 505 1 3930 272 67 84 chr2 253155684 253155875 -100708 + L1M4 LINE L1 2515 2708 -4117 2295 95 0 0 chr2 253156171 253156465 -100118 - AluSq SINE Alu -19 294 1 351 0 0 0 chr2 253156608 253156647 -99936 + (TG)n Simple_repeat Simple_repeat 1 39 0 1240 157 117 9 chr2 253157031 253157261 -99322 + AluJo SINE Alu 39 293 -19 949 229 90 70 chr2 253157279 253157397 -99186 + MLT2C2 LTR ERVL 1 115 -349 2231 43 0 11 chr2 253157397 253157674 -98909 + AluY SINE Alu 1 274 -37 249 83 0 0 chr2 253157679 253157715 -98868 + (CAA)n Simple_repeat Simple_repeat 1 36 0 949 229 90 70 chr2 253157715 253157992 -98591 + MLT2C2 LTR ERVL 118 410 -54 287 246 0 0 chr2 253158638 253158703 -97880 - Charlie8 DNA MER1_type -1937 480 416 489 251 187 18 chr2 253158809 253158980 -97603 - Charlie8 DNA MER1_type -2151 266 67 14266 212 46 25 chr2 253158981 253160717 -95866 - L1PB3 LINE L1 -2 6868 5170 225 65 0 0 chr2 253160717 253160748 -95835 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 14266 212 46 25 chr2 253160748 253162398 -94185 - L1PB3 LINE L1 -1700 5170 3556 1819 175 10 0 chr2 253162398 253162690 -93893 + AluJb SINE Alu 1 295 -17 14266 212 46 25 chr2 253162690 253163267 -93316 - L1PB3 LINE L1 -3314 3556 2993 742 100 100 9 chr2 253163267 253163377 -93206 - AluSg/x SINE Alu -17 295 176 14266 212 46 25 chr2 253163377 253163455 -93128 - L1PB3 LINE L1 -3877 2993 2918 240 35 0 0 chr2 253163455 253163484 -93099 + (TG)n Simple_repeat Simple_repeat 2 30 0 14266 212 46 25 chr2 253163484 253165414 -91169 - L1PB3 LINE L1 -3952 2918 604 321 278 113 83 chr2 253165422 253165857 -90726 + L1M2 LINE L1 440 887 -5962 670 301 58 19 chr2 253165973 253166402 -90181 - L1PB3 LINE L1 -6415 448 3 705 201 113 32 chr2 253167124 253167408 -89175 - L1MC5 LINE L1 -50 7911 7605 210 171 0 0 chr2 253167515 253167556 -89027 + CT-rich Low_complexity Low_complexity 2 42 0 6248 116 18 47 chr2 253167660 253169157 -87426 + L1PA10 LINE L1 4271 6164 -4 483 232 99 73 chr2 253169171 253169319 -87264 - L1MC5 LINE L1 -504 7457 7314 2141 130 0 0 chr2 253169319 253169641 -86942 - AluSx SINE Alu 0 322 1 483 232 99 73 chr2 253169641 253169793 -86790 - L1MC5 LINE L1 -647 7314 7148 1485 130 17 0 chr2 253169801 253170039 -86544 - L1PA16 LINE L1 -8 6158 5917 476 152 33 0 chr2 253170154 253170246 -86337 - L1PA16 LINE L1 -623 5538 5444 * 546 215 91 83 chr2 253170245 253170510 -86073 - L1MC5 LINE L1 -789 7172 6906 2218 99 0 0 chr2 253170517 253170800 -85783 - AluSc SINE Alu -26 283 1 251 216 39 0 chr2 253170866 253170917 -85666 - L1MC4 LINE L1 -1064 6978 6926 872 318 137 37 chr2 253171045 253171887 -84696 + L2 LINE L2 2050 2975 -339 266 274 41 83 chr2 253172529 253172795 -83788 - L1MC4 LINE L1 -1880 5928 5674 1649 117 7 62 chr2 253173113 253173321 -83262 - AluSx SINE Alu -53 259 68 3881 106 60 2 chr2 253173321 253173868 -82715 + LTR19B LTR ERV1 2 580 0 1649 117 7 62 chr2 253173868 253173933 -82650 - AluSx SINE Alu -244 68 1 628 285 120 64 chr2 253173971 253174553 -82030 - L1MEd LINE L1 -4763 1547 902 348 319 73 42 chr2 253174968 253175486 -81097 - L1ME2 LINE L1 -213 5951 5418 400 296 33 45 chr2 253175555 253175798 -80785 - L1ME2 LINE L1 -1498 4648 4409 268 204 0 0 chr2 253175795 253175844 -80739 - L1MC4 LINE L1 -605 5579 5531 * 1003 72 0 0 chr2 253175844 253175969 -80614 + AluY SINE Alu 173 297 -14 3336 217 76 15 chr2 253175969 253176600 -79983 - L1MC4 LINE L1 -656 5508 4917 2147 113 3 0 chr2 253176600 253176908 -79675 + AluSp SINE Alu 1 309 0 3336 217 76 15 chr2 253176908 253177532 -79051 - L1MC4 LINE L1 -1247 4917 4167 316 221 58 0 chr2 253177597 253177683 -78900 - L1MC4 LINE L1 -1958 4188 4098 212 242 0 0 chr2 253178229 253178291 -78292 + (TGGG)n Simple_repeat Simple_repeat 1 62 0 4204 189 62 37 chr2 253178638 253179686 -76897 - L1MC3 LINE L1 -753 5393 5271 400 195 37 81 chr2 253179763 253179954 -76629 - L1ME LINE L1 -303 5818 5639 23 0 0 0 chr2 253180147 253180170 -76413 + AT_rich Low_complexity Low_complexity 1 23 0 261 289 13 50 chr2 253180560 253180719 -75864 - L2 LINE L2 -920 2394 2242 222 136 0 0 chr2 253180784 253180828 -75755 + (TCCA)n Simple_repeat Simple_repeat 1 44 0 359 220 21 71 chr2 253180867 253181008 -75575 - L2 LINE L2 -43 3270 3137 37 0 0 0 chr2 253181358 253181395 -75188 + AT_rich Low_complexity Low_complexity 1 37 0 2924 3 0 3 chr2 253183607 253183919 -72664 - AluYa5 SINE Alu 0 311 1 259 81 27 0 chr2 253184039 253184076 -72507 - MER75 DNA T2_type -4 510 473 225 329 14 0 chr2 253184115 253184185 -72398 - L2 LINE L2 -8 3305 3235 212 322 22 22 chr2 253185801 253185891 -70692 - L2 LINE L2 -11 3302 3213 44 0 0 0 chr2 253187379 253187423 -69160 + AT_rich Low_complexity Low_complexity 1 44 0 935 133 0 14 chr2 253187440 253187583 -69000 - AluJb SINE Alu -171 141 1 187 317 0 0 chr2 253188275 253188335 -68248 + MIR SINE MIR 81 140 -68 1761 44 0 5 chr2 253189351 253189555 -67028 - AluY SINE Alu -11 300 98 188 241 76 51 chr2 253190614 253190693 -65890 - L2 LINE L2 -22 3250 3170 540 226 0 22 chr2 253190862 253190999 -65584 - L1MB8 LINE L1 -1 6177 6044 477 311 62 5 chr2 253191057 253191250 -65333 - L2 LINE L2 -15 3298 3095 1953 141 0 27 chr2 253197414 253197712 -58871 + AluJb SINE Alu 1 290 -22 286 335 204 3 chr2 253198048 253198430 -58153 - L2 LINE L2 -2 3311 2853 213 333 30 0 chr2 253198444 253198576 -58007 + (CAGGG)n Simple_repeat Simple_repeat 3 138 0 303 219 14 0 chr2 253198603 253198676 -57907 - L2 LINE L2 -536 2778 2705 210 299 13 13 chr2 253199297 253199374 -57209 + L2 LINE L2 3194 3270 -2 1662 180 28 3 chr2 253199924 253200208 -56375 + AluJb SINE Alu 1 291 -21 257 250 179 9 chr2 253200403 253200515 -56068 + MIR3 SINE MIR 29 159 -49 2309 97 7 3 chr2 253200714 253201022 -55561 - AluSq SINE Alu -4 309 1 574 274 22 6 chr2 253201502 253201681 -54902 + MIR SINE MIR 63 244 -18 4078 152 117 12 chr2 253202092 253203197 -53386 - Tigger3(Golem) DNA MER2_type -1 3028 1 518 241 41 0 chr2 253203347 253203492 -53091 - LTR33 LTR ERVL -7 514 364 291 254 73 18 chr2 253203643 253203753 -52830 - LTR33 LTR ERVL -399 122 7 1017 253 81 52 chr2 253204152 253204598 -51985 - MER68 LTR ERV1 -86 476 18 234 254 146 42 chr2 253204704 253204869 -51714 - L2 LINE L2 -2169 1145 964 521 242 219 17 chr2 253205161 253205339 -51244 + MER58C DNA MER1_type 1 214 -1 313 247 113 27 chr2 253205692 253205842 -50741 - L1MCa LINE L1 -2867 3559 3397 845 174 74 157 chr2 253206144 253206376 -50207 - MER2 DNA MER2_type -1 344 149 1510 81 85 0 chr2 253206376 253206587 -49996 + MER30 DNA MER1_type 1 229 -1 845 174 74 157 chr2 253206587 253206704 -49879 - MER2 DNA MER2_type -196 149 24 1936 211 67 104 chr2 253206738 253208007 -48576 - L1MCa LINE L1 -3135 3291 2066 1583 193 17 14 chr2 253208007 253208302 -48281 - AluSx SINE Alu -16 296 1 3443 118 25 19 chr2 253208595 253209119 -47464 - MER1A DNA MER1_type 0 527 1 478 332 10 5 chr2 253214330 253214526 -42057 + L1ME3 LINE L1 5931 6127 -35 260 266 81 77 chr2 253214922 253214976 -41607 - L1M4 LINE L1 -1489 4657 4605 2370 95 0 3 chr2 253214976 253215270 -41313 + AluSq SINE Alu 1 293 -20 260 266 81 77 chr2 253215270 253215463 -41120 - L1M4 LINE L1 -1541 4605 4409 879 285 85 57 chr2 253215516 253216775 -39808 + L1ME3 LINE L1 4779 6068 -94 255 114 0 0 chr2 253216832 253216876 -39707 + (TA)n Simple_repeat Simple_repeat 1 44 0 21 0 0 0 chr2 253217132 253217153 -39430 + AT_rich Low_complexity Low_complexity 1 21 0 576 305 67 9 chr2 253217468 253217678 -38905 + MIR SINE MIR 25 246 -16 2058 130 0 3 chr2 253218576 253218861 -37722 + AluY SINE Alu 1 284 -27 273 57 0 0 chr2 253218862 253218897 -37686 + (CA)n Simple_repeat Simple_repeat 2 36 0 240 35 0 0 chr2 253218950 253218979 -37604 + (GA)n Simple_repeat Simple_repeat 2 30 0 558 107 45 40 chr2 253219975 253220152 -36431 + GA-rich Low_complexity Low_complexity 2 179 0 180 292 0 0 chr2 253222892 253222940 -33643 - L2 LINE L2 0 3313 3266 219 190 0 0 chr2 253223580 253223638 -32945 + L3 LINE CR1 1413 1470 -107 198 0 0 0 chr2 253224292 253224314 -32269 + (A)n Simple_repeat Simple_repeat 1 22 0 194 235 88 0 chr2 253224434 253224502 -32081 + MER5A DNA MER1_type 9 82 -107 185 300 29 0 chr2 253225523 253225593 -30990 + MIR SINE MIR 34 105 -103 2130 149 0 0 chr2 253225712 253226020 -30563 - AluSx SINE Alu -4 308 1 1501 199 128 13 chr2 253226021 253226412 -30171 - L1MC3 LINE L1 -164 7621 7186 21 36 0 0 chr2 253228130 253228158 -28425 + AT_rich Low_complexity Low_complexity 1 28 0 259 271 146 43 chr2 253228464 253228744 -27839 - L1MEd LINE L1 -5190 929 621 342 169 91 0 chr2 253228747 253228824 -27759 - MER53 DNA DNA -1 188 105 290 331 42 6 chr2 253228873 253229039 -27544 - L1MEd LINE L1 -5491 628 457 328 246 240 11 chr2 253229175 253229350 -27233 - L1MEd LINE L1 -5900 219 5 343 282 55 9 chr2 253229744 253229854 -26729 - L2 LINE L2 -39 3274 3160 226 322 89 43 chr2 253230016 253230364 -26219 - L2 LINE L2 -385 2929 2566 215 330 99 21 chr2 253231460 253231693 -24890 - L2 LINE L2 -1211 2103 1853 202 306 65 19 chr2 253231721 253231829 -24754 - L2 LINE L2 -1606 1708 1596 180 293 172 9 chr2 253234401 253234517 -22066 - MIR SINE MIR -105 157 23 1254 152 70 8 chr2 253234586 253234829 -21754 - MSTA LTR MaLR 0 428 171 1112 152 17 0 chr2 253235290 253235468 -21115 - MSTA LTR MaLR -227 199 19 2071 134 7 7 chr2 253235746 253236052 -20531 + AluSx SINE Alu 5 310 -2 263 215 15 0 chr2 253237735 253237800 -18783 + (TA)n Simple_repeat Simple_repeat 2 67 0 297 0 0 0 chr2 253237800 253237833 -18750 + (CA)n Simple_repeat Simple_repeat 2 34 0 952 123 36 0 chr2 253239613 253239751 -16832 - FRAM SINE Alu -30 146 4 2141 252 110 33 chr2 253239756 253240826 -15757 + L1M4 LINE L1 3373 4525 -1621 690 282 89 23 chr2 253240987 253241501 -15082 + L1ME1 LINE L1 1941 2482 -3733 820 278 79 16 chr2 253241549 253241801 -14782 + LTR40a LTR ERVL 252 519 0 2346 224 96 14 chr2 253241802 253242539 -14044 + L1ME1 LINE L1 5428 6225 -10 197 108 27 0 chr2 253242621 253242658 -13925 + (CA)n Simple_repeat Simple_repeat 1 38 0 1344 242 22 48 chr2 253242683 253243179 -13404 - L1M4 LINE L1 -1213 4933 4451 322 311 75 27 chr2 253243567 253243860 -12723 + ERVL LTR ERVL 2416 2722 -3042 195 289 0 0 chr2 253244210 253244262 -12321 - L2 LINE L2 -229 3043 2992 3468 249 23 81 chr2 253244338 253245566 -11017 + MER21-int LTR ERV1 1946 3102 -1089 3059 171 9 23 chr2 253245588 253245988 -10595 + MER41D LTR ERV1 9 400 -157 2217 128 0 0 chr2 253245988 253246285 -10298 - AluSx SINE Alu -15 297 1 3059 171 9 23 chr2 253246285 253246439 -10144 + MER41D LTR ERV1 400 555 -2 302 350 49 0 chr2 253246449 253246572 -10011 + L1ME LINE L1 5318 5446 -724 894 277 145 0 chr2 253246595 253247069 -9514 - L1MC4 LINE L1 -651 5591 5293 1320 151 27 0 chr2 253247077 253247296 -9287 - AluJb SINE Alu -1 311 87 191 264 111 42 chr2 253247433 253247505 -9078 + L2 LINE L2 3032 3108 -164 216 206 0 44 chr2 253248838 253248906 -7677 + CT-rich Low_complexity Low_complexity 1 65 0 532 299 112 36 chr2 253250351 253250772 -5811 + L2 LINE L2 2841 3293 -20 219 312 13 0 chr2 253250844 253250921 -5662 + L2 LINE L2 2295 2372 -942 299 266 0 25 chr2 253252186 253252265 -4318 - Charlie8 DNA MER1_type -2249 168 92 2066 93 43 11 chr2 253252443 253252722 -3861 + AluSx SINE Alu 9 296 -16 35 0 0 0 chr2 253253106 253253141 -3442 + AT_rich Low_complexity Low_complexity 1 35 0 441 320 166 37 chr2 253253187 253254007 -2576 - L1MC4 LINE L1 -1438 4708 3624 2229 114 3 16 chr2 253254789 253255105 -1478 - AluSx SINE Alu 0 312 1 246 28 0 28 chr2 253255324 253255360 -1223 + MADE1 DNA Mariner 46 80 0 497 318 81 70 chr2 253255810 253256354 -229 - HAL1b LINE L1 -511 837 288